#Deleted in new
chr1	11868	14409	chr1:11868-14409	7	+	11868	11868	16724991	3	359,109,1189,	0,744,1352,
#Deleted in new
chr1	12009	13670	chr1:12009-13670	5	+	12009	12009	16724991	6	48,49,85,78,154,218,	0,169,603,965,1211,1443,
#Partially deleted in new
chr1	14403	29570	chr1:14403-29570	7	-	14403	14403	16724991	11	98,34,152,159,198,136,137,147,99,154,37,	0,601,1392,2203,2454,2829,3202,3511,3864,10334,15130,
#Deleted in new
chr1	17368	17436	chr1:17368-17436	3	-	17368	17368	5263520	1	68,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	29553	31097	chr1:29553-31097	3	+	29553	29553	8553170	3	486,104,122,	0,1010,1422,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	30266	31109	chr1:30266-31109	1	+	30266	30266	8553170	2	401,134,	0,709,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	30365	30503	chr1:30365-30503	3	+	30365	30365	5263520	1	138,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	34553	36081	chr1:34553-36081	3	-	34553	34553	789624	3	621,205,361,	0,723,1167,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	35244	36073	chr1:35244-36073	0	-	35244	35244	8553170	2	237,353,	0,476,
#Deleted in new
chr1	52472	53312	chr1:52472-53312	7	+	52472	52472	16724991	1	840,	0,
#Partially deleted in new
chr1	57597	64116	chr1:57597-64116	7	+	57597	57597	16724991	3	56,157,1201,	0,1102,5318,
#Deleted in new
chr1	62948	63887	chr1:62948-63887	5	+	62948	62948	16724991	1	939,	0,
#Deleted in new
chr1	65418	71585	chr1:65418-71585	1	+	65564	70008	789624	3	15,54,2549,	0,101,3618,
#Deleted in new
chr1	69054	70108	chr1:69054-70108	3	+	69090	70008	789624	1	1054,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	89294	120932	chr1:89294-120932	3	-	89294	89294	8553170	4	2335,150,105,158,	0,2796,23405,31480,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	89550	91105	chr1:89550-91105	3	-	89550	89550	8553170	2	500,819,	0,736,
#Partially deleted in new
chr1	92229	129217	chr1:92229-129217	0	-	92229	92229	8553170	4	11,105,212,163,	0,20470,28491,36825,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	110952	129173	chr1:110952-129173	0	-	110952	110952	8553170	3	405,105,119,	0,1747,18102,
#Partially deleted in new
chr1	120724	133723	chr1:120724-133723	1	-	120724	120724	8553170	4	145,59,169,350,	0,149,8330,12649,
#Partially deleted in new
chr1	129080	133566	chr1:129080-133566	0	-	129080	129080	8553170	2	143,193,	0,4293,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	131024	134836	chr1:131024-134836	7	+	131024	131024	16724991	1	3812,	0,
#Deleted in new
chr1	135140	135895	chr1:135140-135895	7	-	135140	135140	16724991	1	755,	0,
#Deleted in new
chr1	137681	137965	chr1:137681-137965	7	-	137681	137681	16724991	1	284,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	141473	149707	chr1:141473-149707	1	-	141473	141473	8553170	2	1538,3322,	0,4912,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	142807	146831	chr1:142807-146831	0	-	142807	142807	8553170	3	204,124,190,	0,3578,3834,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	146385	173862	chr1:146385-173862	3	-	146385	146385	8553170	8	124,65,529,59,66,216,132,110,	0,9381,17877,19498,21714,22663,26171,27367,
#Deleted in new
chr1	157783	157887	chr1:157783-157887	3	-	157783	157783	8553170	1	104,	0,
#Deleted in new
chr1	160445	161525	chr1:160445-161525	3	+	160445	160445	8553170	2	245,212,	0,868,
#Deleted in new
chr1	182695	184174	chr1:182695-184174	7	+	182695	182695	16724991	5	51,85,78,162,194,	0,436,798,1044,1285,
#Partially deleted in new
chr1	185216	195411	chr1:185216-195411	7	-	185216	185216	16724991	10	134,69,153,159,202,136,137,146,112,149,	0,274,1100,1912,2159,2538,2913,3222,3574,10046,
#Deleted in new
chr1	187890	187958	chr1:187890-187958	3	-	187890	187890	5263520	1	68,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	257863	264733	chr1:257863-264733	5	-	257863	257863	16724991	2	1162,130,	0,6740,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	257912	268816	chr1:257912-268816	4	-	257912	257912	16724991	4	1113,85,902,150,	0,3637,9390,10754,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	258143	359681	chr1:258143-359681	7	-	258143	258143	16724991	4	882,902,135,337,	0,98541,99905,101201,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	258523	268816	chr1:258523-268816	4	-	258523	258523	16724991	3	502,902,150,	0,8779,10143,
#Partially deleted in new
chr1	258567	259024	chr1:258567-259024	5	-	258567	258567	16724991	1	457,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	263014	297502	chr1:263014-297502	4	-	263014	263014	16724991	4	5190,150,105,158,	0,5652,26251,34330,
#Deleted in new
chr1	347981	348366	chr1:347981-348366	7	-	347981	347981	16724991	1	385,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	358856	365704	chr1:358856-365704	0	+	358856	358856	8553170	2	73,534,	0,6314,
#Partially deleted in new
chr1	358871	365510	chr1:358871-365510	0	+	358871	358871	8553170	2	86,340,	0,6299,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	360056	366052	chr1:360056-366052	3	+	360056	360056	8553170	2	112,882,	0,5114,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	365388	366151	chr1:365388-366151	5	-	365388	365388	16724991	2	304,133,	0,630,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	365394	368450	chr1:365394-368450	4	-	365394	365394	16724991	2	298,200,	0,2856,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	365614	379972	chr1:365614-379972	4	-	365614	365614	16724991	3	78,180,204,	0,7529,14154,
#Partially deleted in new
chr1	373181	485208	chr1:373181-485208	4	-	373181	373181	16724991	3	142,102,169,	0,6587,111858,
#Partially deleted in new
chr1	439869	440232	chr1:439869-440232	7	+	439869	439869	16724991	1	363,	0,
#Deleted in new
chr1	450702	451697	chr1:450702-451697	3	-	450739	451678	789624	1	995,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	476363	497259	chr1:476363-497259	4	-	476363	476363	16724991	3	582,169,151,	0,8676,20745,
#Deleted in new
chr1	485025	485208	chr1:485025-485208	5	-	485025	485025	16724991	1	183,	0,
#Partially deleted in new
chr1	485065	489553	chr1:485065-489553	4	-	485065	485065	16724991	2	143,193,	0,4295,
#Deleted in new
chr1	487100	489906	chr1:487100-489906	7	+	487100	487100	16724991	2	2287,190,	0,2616,
#Deleted in new
chr1	491224	493241	chr1:491224-493241	7	-	491224	491224	16724991	2	765,474,	0,1543,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	494381	496605	chr1:494381-496605	4	-	494381	494381	16724991	2	205,342,	0,1882,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	494463	502508	chr1:494463-502508	4	-	494463	494463	16724991	5	435,58,191,65,44,	0,528,2645,7092,8001,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	494610	499175	chr1:494610-499175	4	-	494610	494610	16724991	3	288,58,492,	0,381,4073,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	494770	498976	chr1:494770-498976	4	-	494770	494770	16724991	5	128,58,191,58,293,	0,221,2338,3628,3913,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	497133	498456	chr1:497133-498456	4	-	497133	497133	16724991	3	166,233,58,	0,939,1265,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	497274	498976	chr1:497274-498976	4	-	497274	497274	16724991	2	25,578,	0,1124,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	498983	501607	chr1:498983-501607	4	-	498983	498983	16724991	2	386,52,	0,2572,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	501603	517225	chr1:501603-517225	4	-	501603	501603	16724991	5	17,197,124,65,70,	0,861,3376,12755,15552,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	504469	514413	chr1:504469-514413	4	-	504469	504469	16724991	2	464,55,	0,9889,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	504864	522928	chr1:504864-522928	7	-	504864	504864	16724991	4	239,65,82,70,	0,9494,12320,17994,
#Deleted in new
chr1	516375	516479	chr1:516375-516479	3	-	516375	516375	8553170	1	104,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	586070	612813	chr1:586070-612813	5	-	586070	586070	16724991	6	288,135,128,180,102,73,	0,750,8558,15327,21884,26670,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	586277	588453	chr1:586277-588453	4	-	586277	586277	16724991	3	81,135,337,	0,543,1839,
#Partially deleted in new
chr1	586944	720194	chr1:586944-720194	4	-	586944	586944	16724991	4	11,105,212,163,	0,116740,124766,133087,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	587628	594768	chr1:587628-594768	3	+	587628	587628	8553170	2	73,534,	0,6606,
#Partially deleted in new
chr1	587667	594574	chr1:587667-594574	0	+	587667	587667	8553170	2	62,340,	0,6567,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	594190	633129	chr1:594190-633129	4	-	594190	594190	16724991	5	566,180,102,88,86,	0,7207,13764,34728,38853,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	594197	631204	chr1:594197-631204	4	-	594197	594197	16724991	6	559,180,102,124,88,74,	0,7200,13757,18543,34721,36933,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	594307	598551	chr1:594307-598551	4	-	594307	594307	16724991	2	449,1253,	0,2991,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	594307	827769	chr1:594307-827769	4	-	594307	594307	16724991	4	449,180,212,100,	0,7090,117403,233362,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	594457	733064	chr1:594457-733064	4	-	594457	594457	16724991	8	299,180,102,33,158,169,191,84,	0,6940,13497,104469,117307,125574,137559,138523,
#Partially deleted in new
chr1	601435	720200	chr1:601435-720200	4	-	601435	601435	16724991	3	142,102,169,	0,6519,118596,
#Deleted in new
chr1	627376	631150	chr1:627376-631150	4	-	627376	627376	16724991	4	447,263,88,20,	0,584,1542,3754,
#Deleted in new
chr1	629061	629433	chr1:629061-629433	7	+	629061	629061	16724991	1	372,	0,
#Deleted in new
chr1	629639	630683	chr1:629639-630683	7	+	629639	629639	16724991	1	1044,	0,
#Deleted in new
chr1	631073	632616	chr1:631073-632616	7	+	631073	631073	16724991	1	1543,	0,
#Deleted in new
chr1	632324	632413	chr1:632324-632413	3	-	632324	632324	5263520	1	89,	0,
#Deleted in new
chr1	632756	633438	chr1:632756-633438	7	+	632756	632756	16724991	1	682,	0,
#Deleted in new
chr1	633534	633741	chr1:633534-633741	7	+	633534	633534	16724991	1	207,	0,
#Deleted in new
chr1	633695	634376	chr1:633695-634376	7	+	633695	633695	16724991	1	681,	0,
#Deleted in new
chr1	634375	634922	chr1:634375-634922	7	+	634375	634375	16724991	1	547,	0,
#Partially deleted in new
chr1	674841	675265	chr1:674841-675265	7	+	674841	674841	16724991	1	424,	0,
#Deleted in new
chr1	685678	686673	chr1:685678-686673	3	-	685715	686654	789624	1	995,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	701935	720150	chr1:701935-720150	4	-	701935	701935	16724991	3	405,105,119,	0,1749,18096,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	711866	732212	chr1:711866-732212	4	-	711866	711866	16724991	3	56,169,196,	0,8165,20150,
#Deleted in new
chr1	720023	720206	chr1:720023-720206	5	-	720023	720023	16724991	1	183,	0,
#Partially deleted in new
chr1	720052	724564	chr1:720052-724564	4	-	720052	720052	16724991	2	148,207,	0,4305,
#Deleted in new
chr1	722091	724903	chr1:722091-724903	7	+	722091	722091	16724991	2	2269,186,	0,2626,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	725884	778626	chr1:725884-778626	7	-	725884	725884	16724991	16	3920,58,191,171,197,98,124,65,157,525,59,66,216,132,110,343,	0,7422,9538,17295,18310,18843,20810,30192,33082,38838,40444,42663,43612,47091,48286,52399,
#Deleted in new
chr1	758232	758336	chr1:758232-758336	3	-	758232	758232	8553170	1	104,	0,
#Deleted in new
chr1	760910	761989	chr1:760910-761989	3	+	760910	760910	8553170	2	244,212,	0,867,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	764722	774280	chr1:764722-774280	5	-	764722	764722	16724991	5	78,104,59,66,110,	0,421,1606,3825,9448,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	778769	784690	chr1:778769-784690	1	+	778769	778769	8553170	3	323,200,321,	0,3167,5600,
#Partially deleted in new
chr1	778781	782191	chr1:778781-782191	1	+	778781	778781	8553170	2	311,255,	0,3155,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	778929	784655	chr1:778929-784655	0	+	778929	778929	8553170	4	163,107,253,286,	0,3007,4181,5440,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	778936	784429	chr1:778936-784429	0	+	778936	778936	8553170	4	156,200,253,60,	0,3000,4174,5433,
#Partially deleted in new
chr1	779055	804875	chr1:779055-804875	3	+	779055	779055	8553170	3	37,304,100,	0,24863,25720,
#Deleted in new
chr1	781936	782050	chr1:781936-782050	7	+	781936	781936	16724991	1	114,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	784369	795513	chr1:784369-795513	0	+	784369	784369	8553170	2	124,44,	0,11100,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	784369	801876	chr1:784369-801876	0	+	784369	784369	8553170	2	124,270,	0,17237,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	784369	784759	chr1:784369-784759	0	+	784369	784369	8553170	1	390,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	784369	786866	chr1:784369-786866	0	+	784369	784369	8553170	2	124,474,	0,2023,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	784369	805270	chr1:784369-805270	0	+	784369	784369	8553170	4	124,101,304,495,	0,19197,19549,20406,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	784369	809729	chr1:784369-809729	0	+	784369	784369	8553170	4	124,304,107,72,	0,19549,22847,25288,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	784369	807314	chr1:784369-807314	0	+	784369	784369	8553170	4	124,301,191,98,	0,19552,20406,22847,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	784369	804832	chr1:784369-804832	0	+	784369	784369	8553170	5	124,160,113,272,57,	0,8512,11100,19581,20406,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	784369	805127	chr1:784369-805127	0	+	784369	784369	8553170	3	124,304,352,	0,19549,20406,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	784369	784977	chr1:784369-784977	0	+	784369	784369	8553170	1	608,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	784369	806459	chr1:784369-806459	0	+	784369	784369	8553170	4	124,304,191,74,	0,19549,20406,22016,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	784395	807321	chr1:784395-807321	0	+	784395	784395	8553170	7	98,160,113,101,272,191,105,	0,8486,11074,19171,19555,20380,22821,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	785799	787672	chr1:785799-787672	1	+	785799	785799	8553170	1	1873,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	800878	817712	chr1:800878-817712	7	-	800878	800878	16724991	5	285,93,50,104,340,	0,4920,7695,9188,16494,
#Deleted in new
chr1	804798	807465	chr1:804798-807465	1	+	804798	804798	8553170	2	168,249,	0,2418,
#Partially deleted in new
chr1	804931	810060	chr1:804931-810060	1	+	804931	804931	8553170	3	35,107,439,	0,2285,4690,
#Partially deleted in new
chr1	805798	810161	chr1:805798-810161	5	-	805798	805798	16724991	3	93,50,95,	0,2775,4268,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	817370	819837	chr1:817370-819837	3	+	817370	817370	789624	2	832,1115,	0,1352,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	825137	849592	chr1:825137-849592	0	+	825137	825137	8553170	3	415,153,109,	0,22516,24346,
#Deleted in new
chr1	826205	827522	chr1:826205-827522	3	-	826205	826205	789624	1	1317,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	826831	852225	chr1:826831-852225	0	+	826831	826831	8553170	3	92,102,299,	0,2171,25095,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	827607	859446	chr1:827607-859446	3	+	827607	827607	789624	5	168,102,184,96,6056,	0,1395,24319,25063,25783,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	827656	852014	chr1:827656-852014	0	+	827656	827656	8553170	5	119,102,153,171,88,	0,1346,19997,22524,24270,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	827660	852090	chr1:827660-852090	1	+	827660	827660	8553170	6	115,102,153,119,171,164,	0,1342,19993,21823,22520,24266,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	827660	851987	chr1:827660-851987	0	+	827660	827660	8553170	5	115,102,153,119,61,	0,1342,19993,21823,24266,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	827666	841738	chr1:827666-841738	0	+	827666	827666	8553170	3	109,102,539,	0,1336,13533,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	827668	851998	chr1:827668-851998	1	+	827668	827668	8553170	4	107,102,174,72,	0,1334,13531,24258,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	827672	853626	chr1:827672-853626	1	+	827672	827672	8553170	6	103,102,153,184,96,236,	0,1330,19981,24254,24998,25718,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	827698	852766	chr1:827698-852766	0	+	827698	827698	8553170	5	77,102,153,184,96,	0,1304,19955,24228,24972,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	827699	853522	chr1:827699-853522	0	+	827699	827699	8553170	4	76,102,184,132,	0,1303,24227,25691,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	827720	852090	chr1:827720-852090	0	+	827720	827720	8553170	6	55,102,153,119,174,164,	0,1282,19933,21763,22457,24206,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	827820	852515	chr1:827820-852515	0	+	827820	827820	8553170	3	33,102,589,	0,1182,24106,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	831604	842020	chr1:831604-842020	1	+	831604	831604	8553170	2	73,821,	0,9595,
#Deleted in new
chr1	851347	852752	chr1:851347-852752	0	+	851347	851347	8553170	2	763,82,	0,1323,
#Deleted in new
chr1	868070	876903	chr1:868070-876903	3	-	868070	868070	5263520	3	605,1044,158,	0,6041,8675,
#Deleted in new
chr1	868239	870201	chr1:868239-870201	1	-	868239	868239	8553170	4	291,49,48,116,	0,387,1288,1846,
#Deleted in new
chr1	868402	876802	chr1:868402-876802	0	-	868402	868402	8553170	3	273,116,57,	0,6637,8343,
#Deleted in new
chr1	873291	874349	chr1:873291-874349	7	+	873291	873291	16724991	1	1058,	0,
#Deleted in new
chr1	874528	877234	chr1:874528-877234	7	-	874528	874528	16724991	5	63,109,100,85,480,	0,518,997,1998,2226,
#Partially deleted in new
chr1	904833	915976	chr1:904833-915976	3	+	904833	904833	8553170	2	124,227,	0,10916,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	911434	914948	chr1:911434-914948	3	+	911434	911434	8553170	2	39,3004,	0,510,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	914170	914971	chr1:914170-914971	3	+	914170	914170	8553170	2	274,169,	0,632,
#Deleted in new
chr1	916864	921016	chr1:916864-921016	0	-	916864	916864	8553170	1	4152,	0,
#Deleted in new
chr1	916869	919692	chr1:916869-919692	3	-	916869	916869	789624	4	851,89,91,358,	0,1152,1955,2465,
#Deleted in new
chr1	917369	918534	chr1:917369-918534	0	-	917369	917369	8553170	2	117,513,	0,652,
#Partially deleted in new
chr1	923927	939291	chr1:923927-939291	0	+	924431	939291	789624	7	1021,92,182,51,125,90,17,	0,1994,6227,7111,11844,15112,15347,
#Partially deleted in new
chr1	925149	935793	chr1:925149-935793	0	+	925941	935793	789624	5	40,92,182,51,22,	0,772,5005,5889,10622,
#Partially deleted in new
chr1	925737	944575	chr1:925737-944575	3	+	925941	944153	789624	14	63,92,182,51,125,90,186,163,116,79,500,125,111,668,	0,184,4417,5301,10034,13302,13537,15406,16398,16672,16821,17515,17960,18170,
#Partially deleted in new
chr1	925740	944581	chr1:925740-944581	1	+	925941	942695	789624	13	60,92,182,51,125,90,186,116,79,500,125,111,674,	0,181,4414,5298,10031,13299,13534,16395,16669,16818,17512,17957,18167,
#Partially deleted in new
chr1	925740	944581	chr1:925740-944581	1	+	925941	944153	789624	12	60,92,182,51,125,90,141,79,500,125,111,674,	0,181,4414,5298,10031,13299,13531,16669,16818,17512,17957,18167,
#Partially deleted in new
chr1	925740	944581	chr1:925740-944581	1	+	925941	944153	789624	13	60,92,182,51,125,90,138,87,79,500,125,111,674,	0,181,4414,5298,10031,13299,13534,15403,16669,16818,17512,17957,18167,
#Partially deleted in new
chr1	925740	944581	chr1:925740-944581	1	+	925941	944153	789624	11	60,92,182,125,90,141,79,500,125,111,674,	0,181,4414,10031,13299,13531,16669,16818,17512,17957,18167,
#Partially deleted in new
chr1	925740	944581	chr1:925740-944581	1	+	925941	942855	789624	12	60,92,182,51,34,135,116,79,500,125,111,674,	0,181,4414,5298,10031,15431,16395,16669,16818,17512,17957,18167,
#Partially deleted in new
chr1	925740	944581	chr1:925740-944581	1	+	925941	944153	789624	13	60,92,182,51,125,90,163,116,79,500,125,111,674,	0,181,4414,5298,10031,13299,15403,16395,16669,16818,17512,17957,18167,
#Partially deleted in new
chr1	925740	944581	chr1:925740-944581	1	+	925941	942855	789624	9	60,92,182,51,79,500,125,111,674,	0,181,4414,5298,16669,16818,17512,17957,18167,
#Partially deleted in new
chr1	925740	944581	chr1:925740-944581	1	+	925941	944153	789624	14	60,92,182,51,125,90,189,163,116,79,500,125,111,674,	0,181,4414,5298,10031,13299,13531,15403,16395,16669,16818,17512,17957,18167,
#Deleted in new
chr1	930311	944575	chr1:930311-944575	0	+	930311	944153	789624	12	25,51,125,90,138,163,116,79,500,125,111,668,	0,727,5460,8728,8963,10832,11824,12098,12247,12941,13386,13596,
#Deleted in new
chr1	939274	944259	chr1:939274-944259	0	+	939274	944153	789624	7	186,163,116,79,500,125,562,	0,1869,2861,3135,3284,3978,4423,
#Deleted in new
chr1	940345	942173	chr1:940345-942173	0	+	940345	940345	8553170	3	117,163,38,	0,798,1790,
#Deleted in new
chr1	941075	942994	chr1:941075-942994	0	+	941075	941075	8553170	4	231,116,79,436,	0,1060,1334,1483,
#Deleted in new
chr1	942102	942802	chr1:942102-942802	0	+	942102	942102	8553170	2	149,393,	0,307,
#Deleted in new
chr1	942165	942892	chr1:942165-942892	0	+	942165	942165	8553170	2	323,334,	0,393,
#Partially deleted in new
chr1	944203	959290	chr1:944203-959290	3	-	944693	959240	789624	19	597,90,136,114,144,102,114,112,140,189,114,111,79,91,121,132,175,153,76,	0,853,1314,1969,2198,3927,4286,6923,7796,8208,8971,9578,9800,11719,11891,12690,12895,14725,15011,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	944203	947060	chr1:944203-947060	0	-	944203	944203	8553170	5	597,105,136,114,659,	0,838,1314,1969,2198,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	944204	958458	chr1:944204-958458	0	-	944204	944204	8553170	17	596,105,136,114,144,102,114,112,140,189,114,111,520,91,121,132,1360,	0,837,1313,1968,2197,3926,4285,6922,7795,8207,8970,9577,9799,11718,11890,12689,12894,
#Deleted in new
chr1	945318	945562	chr1:945318-945562	0	-	945318	945318	8553170	2	104,45,	0,199,
#Partially deleted in new
chr1	954425	959309	chr1:954425-959309	0	-	954425	954425	8553170	7	98,91,121,132,175,153,95,	0,1497,1669,2468,2673,4503,4789,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	958245	959256	chr1:958245-959256	0	-	958245	958245	8553170	2	836,42,	0,969,
#Deleted in new
chr1	960586	965715	chr1:960586-965715	3	+	960693	965191	789624	12	214,260,122,222,117,214,145,168,89,74,182,753,	0,706,1042,1239,1768,2117,2522,2750,3333,3520,3762,4376,
#Deleted in new
chr1	960638	965602	chr1:960638-965602	1	+	962706	964352	789624	9	61,390,214,145,168,89,61,182,640,	0,1443,2065,2470,2698,3281,3468,3710,4324,
#Deleted in new
chr1	961448	962478	chr1:961448-962478	0	+	961448	961448	8553170	2	302,653,	0,377,
#Deleted in new
chr1	962726	964530	chr1:962726-964530	0	+	962726	963386	789624	6	191,222,168,89,61,182,	0,305,610,1193,1380,1622,
#Deleted in new
chr1	963551	964164	chr1:963551-964164	0	+	963551	963551	8553170	2	457,58,	0,555,
#Partially deleted in new
chr1	966496	975108	chr1:966496-975108	3	+	966531	974575	789624	16	118,100,147,81,73,128,96,81,76,137,150,141,141,219,49,667,	0,207,3780,4024,4189,4382,4616,4827,5578,5791,6364,6689,7003,7336,7819,7945,
#Partially deleted in new
chr1	966501	975008	chr1:966501-975008	1	+	966531	974575	789624	15	113,100,147,81,73,128,132,81,76,137,150,141,219,49,567,	0,202,3775,4019,4184,4377,4575,4822,5573,5786,6359,6998,7331,7814,7940,
#Partially deleted in new
chr1	966501	975008	chr1:966501-975008	1	+	966531	974575	789624	15	113,100,147,81,321,132,81,76,137,150,141,141,219,49,567,	0,202,3775,4019,4184,4575,4822,5573,5786,6359,6684,6998,7331,7814,7940,
#Deleted in new
chr1	970874	971523	chr1:970874-971523	0	+	970874	970874	8553170	3	132,132,200,	0,202,449,
#Deleted in new
chr1	973511	975865	chr1:973511-975865	0	+	973511	974575	789624	5	129,219,49,147,154,	0,321,804,930,2200,
#Deleted in new
chr1	975203	982093	chr1:975203-982093	1	-	976171	981166	789624	5	1066,126,1777,37,29,	0,1295,3677,5933,6861,
#Deleted in new
chr1	975204	981029	chr1:975204-981029	3	-	976171	981029	789624	3	1065,126,2149,	0,1294,3676,
#Deleted in new
chr1	975204	976641	chr1:975204-976641	0	-	975204	975204	8553170	2	1065,143,	0,1294,
#Deleted in new
chr1	995965	998051	chr1:995965-998051	3	-	995965	995965	8553170	1	2086,	0,
#Deleted in new
chr1	998961	1000172	chr1:998961-1000172	1	-	999058	999973	789624	3	471,88,481,	0,564,730,
#Deleted in new
chr1	998963	1000111	chr1:998963-1000111	3	-	999058	999973	789624	4	469,88,96,246,	0,562,728,902,
#Deleted in new
chr1	998965	1000096	chr1:998965-1000096	0	-	998965	998965	8553170	2	467,571,	0,560,
#Deleted in new
chr1	998969	999981	chr1:998969-999981	1	-	999058	999973	789624	3	463,88,116,	0,556,896,
#Partially deleted in new
chr1	1001137	1014540	chr1:1001137-1014540	1	+	1014004	1014478	789624	3	144,86,557,	0,7056,12846,
#Partially deleted in new
chr1	1001144	1014435	chr1:1001144-1014435	0	+	1014004	1014435	789624	3	119,86,452,	0,7049,12839,
#Deleted in new
chr1	1008075	1008229	chr1:1008075-1008229	7	-	1008075	1008075	16724991	1	154,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	1011996	1013193	chr1:1011996-1013193	3	-	1011996	1011996	8553170	2	194,277,	0,920,
#Partially deleted in new
chr1	1013422	1014540	chr1:1013422-1014540	3	+	1013573	1014478	0	2	154,557,	0,561,
#Partially deleted in new
chr1	1013496	1014540	chr1:1013496-1014540	1	+	1013573	1014478	789624	2	80,557,	0,487,
#Partially deleted in new
chr1	1020122	1056116	chr1:1020122-1056116	3	+	1020172	1054981	789624	36	251,262,48,216,225,225,207,219,195,201,149,106,117,165,144,125,106,339,138,128,115,120,354,193,216,230,135,97,165,112,117,193,88,225,104,1293,	0,2078,15154,20542,21050,21355,21833,23116,23415,23700,23986,24211,25038,25236,25610,25841,26037,26274,26697,27204,27450,27653,27889,28744,29113,29443,29780,30110,30304,30603,31130,31330,31605,33630,34325,34701,
#Partially deleted in new
chr1	1020122	1056118	chr1:1020122-1056118	1	+	1022413	1054981	789624	39	251,262,48,216,225,225,207,219,195,201,149,106,117,165,144,125,106,339,138,128,115,120,354,193,216,230,135,97,165,112,12,117,193,88,24,33,225,104,1295,	0,2078,15154,20542,21050,21355,21833,23116,23415,23700,23986,24211,25038,25236,25610,25841,26037,26274,26697,27204,27450,27653,27889,28744,29113,29443,29780,30110,30304,30603,30909,31130,31330,31605,31870,33338,33630,34325,34701,
#Deleted in new
chr1	1034105	1040725	chr1:1034105-1040725	0	+	1034555	1040725	789624	3	598,48,61,	0,1171,6559,
#Deleted in new
chr1	1034866	1041397	chr1:1034866-1041397	0	+	1034866	1034866	8553170	3	458,216,225,	0,5798,6306,
#Deleted in new
chr1	1045398	1046349	chr1:1045398-1046349	0	+	1045398	1045398	8553170	4	125,144,125,190,	0,334,565,761,
#Deleted in new
chr1	1047200	1047865	chr1:1047200-1047865	0	+	1047200	1047200	8553170	3	254,115,90,	0,372,575,
#Deleted in new
chr1	1047474	1047838	chr1:1047474-1047838	0	+	1047474	1047474	8553170	2	213,63,	0,301,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	1048528	1049394	chr1:1048528-1049394	0	+	1048528	1048528	8553170	2	531,159,	0,707,
#Deleted in new
chr1	1050507	1053950	chr1:1050507-1053950	0	+	1050507	1053950	789624	9	84,112,12,117,193,88,24,33,198,	0,218,524,745,945,1220,1485,2953,3245,
#Deleted in new
chr1	1051985	1056112	chr1:1051985-1056112	0	+	1051985	1051985	8553170	3	1992,104,1289,	0,2462,2838,
#Deleted in new
chr1	1055032	1056116	chr1:1055032-1056116	3	+	1055032	1055032	8553170	2	183,219,	0,865,
#Deleted in new
chr1	1062207	1063288	chr1:1062207-1063288	3	-	1062207	1062207	8553170	2	601,228,	0,853,
#Partially deleted in new
chr1	1063078	1069355	chr1:1063078-1069355	5	+	1063078	1063078	16724991	10	123,87,192,100,124,81,81,135,148,148,	0,401,1131,1411,2273,3508,4487,4790,5498,6129,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	1070965	1074307	chr1:1070965-1074307	3	-	1071816	1072566	789624	2	1610,292,	0,3050,
#Partially deleted in new
chr1	1081817	1116081	chr1:1081817-1116081	1	-	1082892	1091543	789624	12	1170,469,26,135,66,96,76,108,94,113,54,22,	0,2097,2663,4060,5321,5684,8535,9058,9654,10173,33204,34242,
#Partially deleted in new
chr1	1081822	1116095	chr1:1081822-1116095	0	-	1084018	1091543	789624	11	1165,172,31,26,135,66,96,76,94,113,36,	0,2092,2530,2658,4055,5316,5679,8530,9649,10168,34237,
#Partially deleted in new
chr1	1081822	1116098	chr1:1081822-1116098	3	-	1082892	1091543	789624	10	1165,31,26,135,66,96,76,94,113,39,	0,2530,2658,4055,5316,5679,8530,9649,10168,34237,
#Deleted in new
chr1	1081822	1092077	chr1:1081822-1092077	0	-	1081822	1081822	8553170	9	1165,154,60,135,66,96,76,94,87,	0,2530,3428,4055,5316,5679,8530,9649,10168,
#Partially deleted in new
chr1	1081824	1116089	chr1:1081824-1116089	0	-	1087506	1091543	789624	12	1163,172,31,26,135,66,96,76,97,94,113,30,	0,2090,2528,2656,4053,5314,5677,8528,9453,9647,10166,34235,
#Partially deleted in new
chr1	1081824	1116089	chr1:1081824-1116089	0	-	1091149	1091543	789624	10	1163,469,26,135,66,96,1022,94,113,30,	0,2090,2656,4053,5314,5677,8528,9647,10166,34235,
#Deleted in new
chr1	1081824	1087636	chr1:1081824-1087636	0	-	1081824	1081824	8553170	3	2682,135,498,	0,4053,5314,
#Deleted in new
chr1	1082145	1084072	chr1:1082145-1084072	0	-	1082145	1082145	8553170	3	108,384,158,	0,458,1769,
#Deleted in new
chr1	1082234	1092174	chr1:1082234-1092174	1	-	1082892	1091543	789624	8	753,469,26,135,66,96,76,703,	0,1680,2246,3643,4904,5267,8118,9237,
#Partially deleted in new
chr1	1082699	1106127	chr1:1082699-1106127	1	-	1082892	1091543	789624	10	288,31,26,135,66,96,76,94,113,172,	0,1653,1781,3178,4439,4802,7653,8772,9291,23256,
#Partially deleted in new
chr1	1082915	1116095	chr1:1082915-1116095	0	-	1082915	1091543	789624	11	72,97,31,26,135,66,96,76,94,113,36,	0,999,1437,1565,2962,4223,4586,7437,8556,9075,33144,
#Partially deleted in new
chr1	1083925	1116243	chr1:1083925-1116243	0	-	1083925	1083925	8553170	10	161,31,26,135,66,96,76,94,113,184,	0,427,555,1952,3213,3576,6427,7546,8065,32134,
#Partially deleted in new
chr1	1087138	1116356	chr1:1087138-1116356	0	-	1087138	1091543	789624	7	66,96,76,94,113,94,297,	0,363,3214,4333,4852,18817,28921,
#Deleted in new
chr1	1087140	1092294	chr1:1087140-1092294	0	-	1087140	1087140	8553170	5	64,96,235,94,304,	0,361,3212,4331,4850,
#Partially deleted in new
chr1	1087189	1116361	chr1:1087189-1116361	0	-	1087189	1091543	789624	6	15,96,76,138,113,302,	0,312,3163,4282,4801,28870,
#Deleted in new
chr1	1087574	1092813	chr1:1087574-1092813	0	-	1087574	1091543	789624	5	23,76,94,113,248,	0,2778,3897,4416,4991,
#Deleted in new
chr1	1090405	1092813	chr1:1090405-1092813	0	-	1090405	1091543	789624	5	23,97,94,113,248,	0,872,1066,1585,2160,
#Partially deleted in new
chr1	1091045	1116087	chr1:1091045-1116087	0	-	1091045	1091045	8553170	3	520,113,28,	0,945,25014,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	1091499	1116089	chr1:1091499-1116089	0	-	1091499	1091543	789624	6	66,113,94,222,54,30,	0,491,14456,15150,23522,24560,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	1097584	1104598	chr1:1097584-1104598	3	+	1097584	1097584	8553170	2	529,566,	0,6448,
#Partially deleted in new
chr1	1137016	1144056	chr1:1137016-1144056	3	+	1137016	1137016	789624	3	94,208,1318,	0,3808,5722,
#Deleted in new
chr1	1167103	1167198	chr1:1167103-1167198	3	+	1167103	1167103	5263520	1	95,	0,
#Deleted in new
chr1	1167862	1167952	chr1:1167862-1167952	3	+	1167862	1167862	5263520	1	90,	0,
#Deleted in new
chr1	1169004	1169087	chr1:1169004-1169087	3	+	1169004	1169004	5263520	1	83,	0,
#Deleted in new
chr1	1169356	1170343	chr1:1169356-1170343	3	+	1169356	1169356	8553170	1	987,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	1173055	1179555	chr1:1173055-1179555	3	-	1173055	1173055	8553170	2	3341,191,	0,6309,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	1173883	1175034	chr1:1173883-1175034	0	+	1173883	1173883	8553170	2	43,514,	0,637,
#Partially deleted in new
chr1	1173902	1197935	chr1:1173902-1197935	3	+	1179215	1197847	789624	16	24,56,66,145,81,307,119,130,75,86,172,172,141,117,94,498,	0,363,521,5286,5754,6131,6580,6828,7838,8458,8973,10017,11066,22697,23190,23535,
#Partially deleted in new
chr1	1173905	1197933	chr1:1173905-1197933	1	+	1179215	1197847	789624	16	21,37,66,145,81,307,119,130,75,86,172,172,141,117,94,496,	0,379,518,5283,5751,6128,6577,6825,7835,8455,8970,10014,11063,22694,23187,23532,
#Deleted in new
chr1	1179696	1185864	chr1:1179696-1185864	1	+	1180053	1185142	789624	9	157,307,119,130,75,86,172,172,896,	0,337,786,1034,2044,2664,3179,4223,5272,
#Deleted in new
chr1	1180483	1183927	chr1:1180483-1183927	0	+	1180483	1180483	8553170	5	377,75,86,172,8,	0,1257,1877,2392,3436,
#Deleted in new
chr1	1180536	1180884	chr1:1180536-1180884	0	+	1180536	1180536	8553170	2	65,154,	0,194,
#Partially deleted in new
chr1	1185035	1197475	chr1:1185035-1197475	0	+	1185035	1196448	789624	5	74,103,117,94,38,	0,11350,11564,12057,12402,
#Deleted in new
chr1	1203507	1206571	chr1:1203507-1206571	3	-	1203590	1206571	789624	4	453,88,123,187,	0,891,1862,2877,
#Deleted in new
chr1	1203510	1206691	chr1:1203510-1206691	1	-	1203843	1206571	789624	5	458,203,88,123,307,	0,523,888,1859,2874,
#Deleted in new
chr1	1203843	1206571	chr1:1203843-1206571	1	-	1203843	1206571	789624	5	125,182,88,123,187,	0,211,555,1526,2541,
#Deleted in new
chr1	1203843	1205680	chr1:1203843-1205680	1	-	1203843	1205463	789624	4	125,203,88,311,	0,190,555,1526,
#Deleted in new
chr1	1211325	1214132	chr1:1211325-1214132	3	-	1211554	1214127	0	7	300,129,197,67,102,123,150,	0,378,616,1312,1666,2337,2657,
#Deleted in new
chr1	1211339	1214138	chr1:1211339-1214138	0	-	1211339	1211339	8553170	5	493,197,67,794,156,	0,602,1298,1652,2643,
#Deleted in new
chr1	1212018	1213498	chr1:1212018-1213498	0	-	1212018	1212018	8553170	4	120,67,102,104,	0,619,973,1376,
#Partially deleted in new
chr1	1216907	1232001	chr1:1216907-1232001	1	-	1217511	1228793	789624	7	781,176,159,114,137,479,110,	0,1550,1861,6336,6924,11560,14984,
#Partially deleted in new
chr1	1216930	1232031	chr1:1216930-1232031	3	-	1217669	1228793	789624	7	874,176,159,114,137,479,140,	0,1527,1838,6313,6901,11537,14961,
#Partially deleted in new
chr1	1216930	1232031	chr1:1216930-1232031	0	-	1218620	1228793	789624	7	874,176,175,114,137,479,140,	0,1527,1838,6313,6901,11537,14961,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	1216931	1221351	chr1:1216931-1221351	0	-	1216931	1216931	8553170	3	757,176,2583,	0,1526,1837,
#Deleted in new
chr1	1216933	1220293	chr1:1216933-1220293	0	-	1216933	1216933	8553170	2	755,1836,	0,1524,
#Partially deleted in new
chr1	1218522	1228596	chr1:1218522-1228596	0	-	1218522	1228596	789624	5	111,237,114,137,129,	0,246,4721,5309,9945,
#Partially deleted in new
chr1	1227271	1231968	chr1:1227271-1231968	0	-	1227271	1227271	8553170	3	48,479,77,	0,1196,4620,
#Deleted in new
chr1	1232225	1235041	chr1:1232225-1235041	3	+	1232278	1233268	8553170	1	2816,	0,
#Deleted in new
chr1	1232258	1235041	chr1:1232258-1235041	1	+	1232278	1233268	789624	1	2783,	0,
#Deleted in new
chr1	1242445	1243463	chr1:1242445-1243463	0	-	1242445	1242445	8553170	3	201,79,402,	0,389,616,
#Deleted in new
chr1	1242448	1243158	chr1:1242448-1243158	0	-	1242448	1242448	8553170	2	198,324,	0,386,
#Deleted in new
chr1	1242452	1246722	chr1:1242452-1246722	3	-	1242547	1246690	789624	8	194,79,91,109,152,85,117,209,	0,382,609,991,1501,1738,1928,4061,
#Deleted in new
chr1	1243265	1244418	chr1:1243265-1244418	0	-	1243265	1243265	8553170	3	287,322,38,	0,688,1115,
#Deleted in new
chr1	1243980	1244724	chr1:1243980-1244724	0	-	1243980	1243980	8553170	2	295,344,	0,400,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	1249776	1251334	chr1:1249776-1251334	3	-	1249776	1249776	8553170	1	1558,	0,
#Partially deleted in new
chr1	1253908	1273853	chr1:1253908-1273853	0	-	1266289	1267992	789624	8	1579,81,139,103,41,193,131,188,	0,2136,3083,3299,9437,12189,13953,19757,
#Partially deleted in new
chr1	1253913	1273854	chr1:1253913-1273854	1	-	1255202	1263361	789624	7	1574,81,139,103,41,260,189,	0,2131,3078,3294,9432,13819,19752,
#Partially deleted in new
chr1	1254469	1273885	chr1:1254469-1273885	3	-	1255202	1267992	0	7	1018,81,139,103,41,131,220,	0,1575,2522,2738,8876,13392,19196,
#Partially deleted in new
chr1	1254984	1273855	chr1:1254984-1273855	1	-	1255202	1263361	789624	6	503,81,139,103,41,190,	0,1060,2007,2223,8361,18681,
#Partially deleted in new
chr1	1255047	1273864	chr1:1255047-1273864	0	-	1257286	1267992	789624	8	440,81,139,103,122,41,131,199,	0,997,1944,2160,7221,8298,12814,18618,
#Partially deleted in new
chr1	1255163	1273726	chr1:1255163-1273726	1	-	1255202	1267992	0	7	324,81,139,103,41,131,228,	0,881,1828,2044,8182,12698,18335,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	1255177	1273833	chr1:1255177-1273833	1	-	1255202	1267992	0	8	310,81,139,103,41,48,131,168,	0,867,1814,2030,8168,9605,12684,18488,
#Deleted in new
chr1	1255263	1256335	chr1:1255263-1256335	0	-	1255263	1255263	8553170	2	224,291,	0,781,
#Partially deleted in new
chr1	1255267	1273849	chr1:1255267-1273849	0	-	1267857	1267992	789624	7	220,81,139,103,41,260,184,	0,777,1724,1940,8078,12465,18398,
#Partially deleted in new
chr1	1255394	1273844	chr1:1255394-1273844	0	-	1255394	1267992	789624	7	93,81,139,103,41,131,468,	0,650,1597,1813,7951,12467,17982,
#Partially deleted in new
chr1	1255438	1273827	chr1:1255438-1273827	0	-	1255438	1257042	789624	5	49,81,139,41,162,	0,606,1553,7907,18227,
#Partially deleted in new
chr1	1256048	1273790	chr1:1256048-1273790	0	-	1256048	1256048	8553170	4	77,139,103,292,	0,943,1159,17450,
#Partially deleted in new
chr1	1256991	1273815	chr1:1256991-1273815	0	-	1267857	1267992	789624	6	139,103,41,193,260,150,	0,216,6354,9106,10741,16674,
#Partially deleted in new
chr1	1257010	1273833	chr1:1257010-1273833	0	-	1267857	1267992	789624	6	120,103,122,41,260,168,	0,197,5258,6335,10722,16655,
#Partially deleted in new
chr1	1257048	1273854	chr1:1257048-1273854	0	-	1262259	1267992	789624	6	82,103,221,41,131,189,	0,159,5121,6297,10813,16617,
#Partially deleted in new
chr1	1257121	1263569	chr1:1257121-1263569	0	-	1257121	1257121	8553170	3	9,103,224,	0,86,6224,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	1257226	1273837	chr1:1257226-1273837	0	-	1257226	1267992	789624	5	84,41,48,131,339,	0,6119,7556,10635,16272,
#Partially deleted in new
chr1	1257269	1273854	chr1:1257269-1273854	0	-	1257269	1267992	789624	5	41,41,131,128,189,	0,6076,10592,14240,16396,
#Partially deleted in new
chr1	1262852	1273837	chr1:1262852-1273837	0	-	1262852	1262852	8553170	3	534,131,172,	0,5009,10813,
#Partially deleted in new
chr1	1267861	1273471	chr1:1267861-1273471	0	-	1267861	1267992	789624	2	131,619,	0,4991,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	1275236	1279393	chr1:1275236-1279393	1	+	1275236	1275236	8553170	2	63,326,	0,3831,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	1280435	1292019	chr1:1280435-1292019	3	+	1280661	1291610	789624	18	231,72,200,74,113,94,353,208,191,89,164,99,118,79,58,59,76,766,	0,790,975,1806,3542,5135,5490,6332,6673,7072,7237,7503,9835,10041,10201,10459,10629,10818,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	1280471	1291373	chr1:1280471-1291373	0	+	1280661	1286937	789624	17	195,72,200,74,113,353,208,191,89,164,99,118,79,58,59,76,120,	0,754,939,1770,3506,5454,6296,6637,7036,7201,7467,9799,10005,10165,10423,10593,10782,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	1280587	1292024	chr1:1280587-1292024	1	+	1284024	1291610	789624	15	1023,74,113,353,208,191,89,164,99,118,79,58,59,76,771,	0,1654,3390,5338,6180,6521,6920,7085,7351,9683,9889,10049,10307,10477,10666,
#Partially deleted in new
chr1	1281223	1292029	chr1:1281223-1292029	1	+	1284024	1291610	789624	16	74,200,74,113,353,208,191,89,164,99,118,79,58,59,76,776,	0,187,1018,2754,4702,5544,5885,6284,6449,6715,9047,9253,9413,9671,9841,10030,
#Partially deleted in new
chr1	1281924	1286168	chr1:1281924-1286168	0	+	1282258	1286168	789624	4	86,203,113,243,	0,192,2053,4001,
#Partially deleted in new
chr1	1282108	1292024	chr1:1282108-1292024	1	+	1282258	1291610	789624	15	207,113,94,353,208,191,89,164,99,118,79,58,59,76,771,	0,1869,3462,3817,4659,5000,5399,5564,5830,8162,8368,8528,8786,8956,9145,
#Partially deleted in new
chr1	1282163	1285597	chr1:1282163-1285597	0	+	1282163	1282163	8553170	4	24,40,113,27,	0,112,1814,3407,
#Deleted in new
chr1	1287108	1290943	chr1:1287108-1290943	0	+	1287108	1290943	789624	7	191,329,99,118,79,58,49,	0,399,830,3162,3368,3528,3786,
#Partially deleted in new
chr1	1292375	1308018	chr1:1292375-1308018	3	-	1293563	1307815	789624	24	1333,111,110,227,99,108,203,95,70,209,112,101,52,113,12,75,96,45,184,59,54,120,58,250,	0,1447,1714,2026,2342,3071,3360,3639,3835,4049,5446,5637,5994,6191,6969,7455,7597,7782,8133,9612,10546,10786,11710,15393,
#Partially deleted in new
chr1	1292389	1305929	chr1:1292389-1305929	0	-	1292389	1292389	8553170	22	1319,111,110,227,108,203,95,70,209,112,101,52,113,12,75,96,45,184,59,54,120,1844,	0,1433,1700,2012,3057,3346,3625,3821,4035,5432,5623,5980,6177,6955,7441,7583,7768,8119,9598,10532,10772,11696,
#Deleted in new
chr1	1292869	1298955	chr1:1292869-1298955	0	-	1292869	1292869	8553170	14	839,111,110,227,99,108,203,95,70,209,112,101,52,389,	0,953,1220,1532,1848,2577,2866,3145,3341,3555,4952,5143,5500,5697,
#Partially deleted in new
chr1	1293563	1303260	chr1:1293563-1303260	1	-	1293563	1303260	789624	21	145,111,110,227,108,203,95,70,209,112,101,52,113,12,75,96,45,184,59,54,99,	0,259,526,838,1883,2172,2451,2647,2861,4258,4449,4806,5003,5781,6267,6409,6594,6945,8424,9358,9598,
#Deleted in new
chr1	1294498	1295008	chr1:1294498-1295008	0	-	1294498	1294498	8553170	2	130,291,	0,219,
#Deleted in new
chr1	1296109	1296170	chr1:1296109-1296170	3	-	1296109	1296109	5263520	1	61,	0,
#Deleted in new
chr1	1296435	1298265	chr1:1296435-1298265	0	-	1296435	1296435	8553170	4	198,112,101,81,	0,1386,1577,1749,
#Deleted in new
chr1	1296465	1299617	chr1:1296465-1299617	0	-	1296465	1296465	8553170	6	168,112,101,52,113,273,	0,1356,1547,1904,2101,2879,
#Deleted in new
chr1	1297836	1298241	chr1:1297836-1298241	0	-	1297836	1297836	8553170	2	97,229,	0,176,
#Partially deleted in new
chr1	1298743	1309609	chr1:1298743-1309609	0	-	1298743	1298743	8553170	9	1162,96,45,184,59,54,120,58,168,	0,1229,1414,1765,3244,4178,4418,5342,10698,
#Partially deleted in new
chr1	1300195	1307821	chr1:1300195-1307821	0	-	1303274	1307815	789624	8	7,184,59,54,120,58,47,53,	0,313,1792,2726,2966,3890,7141,7573,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	1301447	1304901	chr1:1301447-1304901	0	-	1301447	1301447	8553170	3	599,54,1740,	0,1474,1714,
#Deleted in new
chr1	1301855	1307830	chr1:1301855-1307830	0	-	1301855	1301855	8553170	5	191,54,120,58,62,	0,1066,1306,2230,5913,
#Deleted in new
chr1	1303209	1307818	chr1:1303209-1307818	0	-	1303209	1303209	8553170	4	72,58,85,50,	0,876,3862,4559,
#Deleted in new
chr1	1308566	1311677	chr1:1308566-1311677	3	+	1308643	1311379	789624	8	154,58,188,150,171,55,163,348,	0,348,519,887,1114,2067,2342,2763,
#Deleted in new
chr1	1308610	1311028	chr1:1308610-1311028	0	+	1308610	1308610	8553170	6	110,188,150,146,55,120,	0,475,843,1095,2023,2298,
#Deleted in new
chr1	1308787	1309840	chr1:1308787-1309840	0	+	1308787	1308787	8553170	2	185,755,	0,298,
#Deleted in new
chr1	1308820	1311069	chr1:1308820-1311069	0	+	1309690	1311069	789624	6	152,188,150,171,55,161,	0,265,633,860,1813,2088,
#Deleted in new
chr1	1309234	1311676	chr1:1309234-1311676	0	+	1309234	1309234	8553170	4	39,361,1036,347,	0,219,801,2095,
#Deleted in new
chr1	1311584	1315433	chr1:1311584-1315433	0	-	1311584	1311584	8553170	10	340,130,143,62,108,163,558,190,65,610,	0,433,641,855,1008,1202,1450,2147,2716,3239,
#Partially deleted in new
chr1	1311584	1324687	chr1:1311584-1324687	1	-	1311858	1321953	0	19	340,130,143,62,108,163,90,84,190,65,139,35,99,229,74,98,77,396,107,	0,433,641,855,1008,1202,1450,1924,2147,2716,3239,3819,3935,7711,8871,9411,10323,11307,12996,
#Partially deleted in new
chr1	1311584	1324687	chr1:1311584-1324687	1	-	1311858	1321034	0	18	340,130,143,62,108,163,90,84,190,65,139,35,99,229,74,98,107,107,	0,433,641,855,1008,1202,1450,1924,2147,2716,3239,3819,3935,7711,8871,9411,11596,12996,
#Partially deleted in new
chr1	1311584	1324687	chr1:1311584-1324687	1	-	1311858	1324608	789624	12	340,130,131,72,90,84,190,18,189,74,98,107,	0,433,641,1293,1450,1924,2147,2716,7751,8871,9411,12996,
#Partially deleted in new
chr1	1311584	1324687	chr1:1311584-1324687	1	-	1311858	1324608	789624	15	340,130,143,62,108,163,90,84,190,65,139,35,95,111,107,	0,433,641,855,1008,1202,1450,1924,2147,2716,3239,3819,3935,11592,12996,
#Partially deleted in new
chr1	1311596	1324691	chr1:1311596-1324691	3	-	1311858	1324608	0	17	328,130,143,62,108,163,90,84,190,65,139,35,99,229,74,98,111,	0,421,629,843,996,1190,1438,1912,2135,2704,3227,3807,3923,7699,8859,9399,12984,
#Deleted in new
chr1	1311597	1312700	chr1:1311597-1312700	0	-	1311597	1311597	8553170	3	327,130,475,	0,420,628,
#Partially deleted in new
chr1	1311599	1324621	chr1:1311599-1324621	0	-	1311599	1311599	8553170	16	325,130,143,62,108,163,90,84,190,65,139,35,99,138,638,41,	0,418,626,840,993,1187,1435,1909,2132,2701,3224,3804,3920,7696,8856,12981,
#Partially deleted in new
chr1	1311600	1324673	chr1:1311600-1324673	1	-	1311858	1324608	789624	15	324,130,143,62,108,163,90,84,190,65,139,35,99,107,93,	0,417,625,839,992,1186,1434,1908,2131,2700,3223,3803,3919,11580,12980,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	1311601	1317450	chr1:1311601-1317450	0	-	1311601	1311601	8553170	13	323,130,143,108,163,90,84,190,65,139,35,99,1294,	0,416,624,991,1185,1433,1907,2130,2699,3222,3802,3918,4555,
#Partially deleted in new
chr1	1311605	1324653	chr1:1311605-1324653	1	-	1311858	1324608	0	15	319,130,143,62,108,163,90,84,190,65,139,35,99,98,73,	0,412,620,834,987,1181,1429,1903,2126,2695,3218,3798,3914,9390,12975,
#Partially deleted in new
chr1	1311605	1324637	chr1:1311605-1324637	1	-	1311858	1313914	789624	14	319,130,143,62,108,163,90,84,374,65,139,35,99,57,	0,412,620,834,987,1181,1429,1903,2126,2695,3218,3798,3914,12975,
#Partially deleted in new
chr1	1311605	1324650	chr1:1311605-1324650	0	-	1323126	1324608	789624	19	319,130,143,62,108,163,90,84,190,65,139,35,99,229,74,98,77,396,70,	0,412,620,834,987,1181,1429,1903,2126,2695,3218,3798,3914,7690,8850,9390,10302,11286,12975,
#Deleted in new
chr1	1311605	1315170	chr1:1311605-1315170	0	-	1311605	1311605	8553170	6	319,130,276,357,558,1439,	0,412,620,987,1429,2126,
#Partially deleted in new
chr1	1311626	1324628	chr1:1311626-1324628	0	-	1314947	1324608	789624	13	298,130,143,62,108,163,90,84,190,65,139,98,48,	0,391,599,813,966,1160,1408,1882,2105,2674,3197,9369,12954,
#Partially deleted in new
chr1	1311818	1324670	chr1:1311818-1324670	1	-	1311858	1324608	0	17	106,130,143,62,108,163,90,84,190,65,139,35,33,229,74,98,90,	0,199,407,621,774,968,1216,1690,1913,2482,3005,3585,3701,7477,8637,9177,12762,
#Partially deleted in new
chr1	1311822	1324666	chr1:1311822-1324666	0	-	1320483	1324608	789624	18	102,130,143,62,108,163,90,84,190,65,139,35,99,229,74,98,107,86,	0,195,403,617,770,964,1212,1686,1909,2478,3001,3581,3697,7473,8633,9173,11358,12758,
#Deleted in new
chr1	1312079	1313825	chr1:1312079-1313825	0	-	1312079	1312079	8553170	7	68,276,108,163,90,84,94,	0,146,513,707,955,1429,1652,
#Deleted in new
chr1	1312259	1313780	chr1:1312259-1313780	0	-	1312259	1312259	8553170	4	690,90,84,49,	0,775,1249,1472,
#Deleted in new
chr1	1312264	1313765	chr1:1312264-1313765	0	-	1312264	1312264	8553170	5	104,62,532,84,34,	0,175,328,1244,1467,
#Partially deleted in new
chr1	1312283	1324648	chr1:1312283-1324648	0	-	1313786	1324608	789624	14	85,62,108,163,90,84,190,139,35,99,229,74,98,68,	0,156,309,503,751,1225,1448,2540,3120,3236,7012,8172,8712,12297,
#Deleted in new
chr1	1312285	1313750	chr1:1312285-1313750	0	-	1312285	1312285	8553170	6	83,62,357,90,84,19,	0,154,307,749,1223,1446,
#Deleted in new
chr1	1312501	1312566	chr1:1312501-1312566	3	-	1312501	1312501	5263520	1	65,	0,
#Partially deleted in new
chr1	1312786	1319346	chr1:1312786-1319346	0	-	1314947	1319346	789624	7	163,90,84,190,139,99,51,	0,248,722,945,2037,2733,6509,
#Deleted in new
chr1	1312938	1315608	chr1:1312938-1315608	0	-	1314947	1315608	789624	7	11,90,84,190,65,139,89,	0,96,570,793,1362,1885,2581,
#Deleted in new
chr1	1313058	1314664	chr1:1313058-1314664	0	-	1313058	1313058	8553170	4	66,84,190,364,	0,450,673,1242,
#Deleted in new
chr1	1313545	1315601	chr1:1313545-1315601	0	-	1313545	1313545	8553170	5	47,190,65,139,198,	0,186,755,1278,1858,
#Partially deleted in new
chr1	1313744	1324630	chr1:1313744-1324630	0	-	1313744	1324608	789624	7	177,65,139,453,74,98,50,	0,556,1079,5327,6711,7251,10836,
#Deleted in new
chr1	1314135	1315141	chr1:1314135-1315141	0	-	1314135	1314135	8553170	2	230,318,	0,688,
#Deleted in new
chr1	1314312	1315697	chr1:1314312-1315697	0	-	1314312	1314312	8553170	4	53,139,35,178,	0,511,1091,1207,
#Partially deleted in new
chr1	1314412	1324629	chr1:1314412-1324629	0	-	1314412	1314412	8553170	7	550,35,99,229,74,98,49,	0,991,1107,4883,6043,6583,10168,
#Partially deleted in new
chr1	1314825	1324658	chr1:1314825-1324658	0	-	1319387	1324608	789624	7	137,35,99,138,74,98,78,	0,578,694,4470,5630,6170,9755,
#Partially deleted in new
chr1	1314826	1324660	chr1:1314826-1324660	0	-	1314826	1319352	789624	5	136,35,99,229,80,	0,577,693,4469,9754,
#Partially deleted in new
chr1	1314877	1324625	chr1:1314877-1324625	0	-	1320999	1324608	789624	9	85,35,99,229,74,98,77,107,45,	0,526,642,4418,5578,6118,7030,8303,9703,
#Partially deleted in new
chr1	1314915	1324671	chr1:1314915-1324671	0	-	1314915	1321953	789624	8	47,35,99,229,74,98,77,91,	0,488,604,4380,5540,6080,6992,9665,
#Partially deleted in new
chr1	1314917	1324659	chr1:1314917-1324659	0	-	1314917	1324608	789624	8	45,35,99,229,74,98,141,79,	0,486,602,4378,5538,6078,8229,9663,
#Partially deleted in new
chr1	1315003	1324637	chr1:1315003-1324637	0	-	1315003	1315003	8553170	3	435,99,57,	0,516,9577,
#Partially deleted in new
chr1	1315145	1324658	chr1:1315145-1324658	0	-	1315145	1315145	8553170	2	473,78,	0,9435,
#Partially deleted in new
chr1	1315559	1320905	chr1:1315559-1320905	0	-	1315559	1315559	8553170	3	59,229,450,	0,3736,4896,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	1317580	1318689	chr1:1317580-1318689	3	-	1317580	1317580	8553170	2	319,67,	0,1042,
#Partially deleted in new
chr1	1318678	1324666	chr1:1318678-1324666	1	-	1318854	1324608	789624	4	846,74,98,86,	0,1777,2317,5902,
#Partially deleted in new
chr1	1318680	1324687	chr1:1318680-1324687	0	-	1318680	1318680	8553170	3	844,638,107,	0,1775,5900,
#Partially deleted in new
chr1	1318696	1324611	chr1:1318696-1324611	0	-	1318696	1318696	8553170	2	2397,31,	0,5884,
#Partially deleted in new
chr1	1319059	1324658	chr1:1319059-1324658	0	-	1319059	1319059	8553170	4	646,74,98,78,	0,1396,1936,5521,
#Partially deleted in new
chr1	1319305	1324671	chr1:1319305-1324671	0	-	1319305	1324608	789624	4	219,74,101,91,	0,1150,1690,5275,
#Partially deleted in new
chr1	1319346	1324642	chr1:1319346-1324642	0	-	1319346	1319346	8553170	4	539,74,98,62,	0,1109,1649,5234,
#Partially deleted in new
chr1	1319380	1324649	chr1:1319380-1324649	0	-	1319380	1319380	8553170	4	463,74,98,69,	0,1075,1615,5200,
#Partially deleted in new
chr1	1319380	1324660	chr1:1319380-1324660	0	-	1320637	1324608	789624	4	144,227,98,80,	0,1075,1615,5200,
#Partially deleted in new
chr1	1319402	1324660	chr1:1319402-1324660	0	-	1319402	1324608	789624	6	122,74,98,73,107,80,	0,1053,1593,2505,3778,5178,
#Partially deleted in new
chr1	1319469	1324603	chr1:1319469-1324603	0	-	1320637	1324603	789624	4	236,227,98,23,	0,986,1526,5111,
#Partially deleted in new
chr1	1320477	1324613	chr1:1320477-1324613	0	-	1323126	1324613	789624	4	52,98,396,33,	0,518,2414,4103,
#Partially deleted in new
chr1	1322770	1324658	chr1:1322770-1324658	0	-	1322770	1322770	8553170	2	517,78,	0,1810,
#Deleted in new
chr1	1324755	1327994	chr1:1324755-1327994	0	+	1324755	1324755	8553170	2	347,754,	0,2485,
#Deleted in new
chr1	1324766	1328897	chr1:1324766-1328897	3	+	1326910	1327763	0	3	336,197,1657,	0,2069,2474,
#Deleted in new
chr1	1325240	1327471	chr1:1325240-1327471	0	+	1326910	1327471	789624	3	355,197,231,	0,1595,2000,
#Deleted in new
chr1	1331313	1335306	chr1:1331313-1335306	3	+	1331345	1334464	789624	6	223,301,783,204,121,1801,	0,324,710,1607,1945,2192,
#Deleted in new
chr1	1335275	1349350	chr1:1335275-1349350	1	-	1336141	1349065	789624	15	1240,207,168,132,153,68,77,140,70,94,139,104,122,70,455,	0,2701,2993,3246,4011,4306,4460,4762,4971,5134,6391,6777,7087,7413,13620,
#Deleted in new
chr1	1335275	1349112	chr1:1335275-1349112	3	-	1336141	1349065	789624	15	1240,207,168,132,78,68,77,140,70,94,139,104,122,70,217,	0,2701,2993,3246,4086,4306,4460,4762,4971,5134,6391,6777,7087,7413,13620,
#Deleted in new
chr1	1335278	1349135	chr1:1335278-1349135	1	-	1336141	1349065	789624	9	1237,207,104,45,139,104,122,70,240,	0,2698,2990,5180,6388,6774,7084,7410,13617,
#Deleted in new
chr1	1336411	1339422	chr1:1336411-1339422	0	-	1337044	1339422	789624	6	104,38,207,168,132,136,	0,606,1565,1857,2110,2875,
#Deleted in new
chr1	1337022	1340052	chr1:1337022-1340052	0	-	1337044	1340052	789624	8	33,207,168,132,78,68,77,15,	0,954,1246,1499,2339,2559,2713,3015,
#Deleted in new
chr1	1338333	1340190	chr1:1338333-1340190	0	-	1338333	1338333	8553170	5	103,132,363,77,153,	0,188,953,1402,1704,
#Deleted in new
chr1	1339491	1340365	chr1:1339491-1340365	0	-	1339491	1339491	8553170	3	321,140,119,	0,546,755,
#Deleted in new
chr1	1339649	1339708	chr1:1339649-1339708	3	-	1339649	1339649	5263520	1	59,	0,
#Deleted in new
chr1	1341769	1348955	chr1:1341769-1348955	0	-	1341769	1341769	8553170	4	387,122,70,60,	0,593,919,7126,
#Partially deleted in new
chr1	1352688	1358794	chr1:1352688-1358794	1	-	1353603	1358504	789624	9	941,81,77,40,156,471,102,24,339,	0,1159,1341,1504,1665,1993,2555,3992,5767,
#Deleted in new
chr1	1352688	1354264	chr1:1352688-1354264	0	-	1352688	1352688	8553170	4	941,81,77,72,	0,1159,1341,1504,
#Partially deleted in new
chr1	1352690	1358535	chr1:1352690-1358535	3	-	1353603	1358504	789624	10	939,81,77,40,156,471,102,303,24,80,	0,1157,1339,1502,1663,1991,2553,2759,3990,5765,
#Partially deleted in new
chr1	1352691	1358543	chr1:1352691-1358543	1	-	1353300	1358504	789624	10	641,99,77,40,156,471,102,303,24,88,	0,1156,1338,1501,1662,1990,2552,2758,3989,5764,
#Partially deleted in new
chr1	1352691	1361777	chr1:1352691-1361777	1	-	1353603	1361263	789624	10	938,81,77,40,156,471,102,303,24,536,	0,1156,1338,1501,1662,1990,2552,2758,3989,8550,
#Deleted in new
chr1	1353191	1354474	chr1:1353191-1354474	0	-	1353191	1353191	8553170	4	737,77,40,121,	0,838,1001,1162,
#Deleted in new
chr1	1353214	1354247	chr1:1353214-1354247	0	-	1353214	1353214	8553170	3	714,77,55,	0,815,978,
#Deleted in new
chr1	1353438	1355016	chr1:1353438-1355016	0	-	1353438	1353438	8553170	5	191,81,77,317,335,	0,409,591,754,1243,
#Deleted in new
chr1	1355003	1355512	chr1:1355003-1355512	0	-	1355003	1355003	8553170	2	342,63,	0,446,
#Deleted in new
chr1	1355082	1355512	chr1:1355082-1355512	0	-	1355082	1355082	8553170	2	70,269,	0,161,
#Deleted in new
chr1	1373729	1375495	chr1:1373729-1375495	3	-	1373800	1374756	0	4	173,446,86,342,	0,270,975,1424,
#Deleted in new
chr1	1373729	1375157	chr1:1373729-1375157	1	-	1373800	1374756	0	3	173,446,453,	0,270,975,
#Deleted in new
chr1	1373731	1375169	chr1:1373731-1375169	1	-	1373800	1374756	0	4	171,446,86,95,	0,268,973,1343,
#Deleted in new
chr1	1373736	1375173	chr1:1373736-1375173	1	-	1373800	1374756	0	4	166,446,86,177,	0,263,968,1260,
#Deleted in new
chr1	1374243	1375144	chr1:1374243-1375144	0	-	1374243	1374243	8553170	2	547,148,	0,753,
#Deleted in new
chr1	1374437	1375159	chr1:1374437-1375159	0	-	1374437	1374437	8553170	2	153,455,	0,267,
#Deleted in new
chr1	1378665	1379032	chr1:1378665-1379032	7	+	1378665	1378665	16724991	1	367,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	1385710	1391096	chr1:1385710-1391096	0	-	1385710	1385710	8553170	8	1872,93,112,19,118,142,105,331,	0,2066,2243,2781,2915,4519,4748,5055,
#Partially deleted in new
chr1	1386481	1398304	chr1:1386481-1398304	0	-	1395470	1398304	789624	10	1101,93,112,142,105,100,125,65,144,72,	0,1295,1472,3748,3977,4284,6197,6914,8912,11751,
#Partially deleted in new
chr1	1386494	1399312	chr1:1386494-1399312	3	-	1387230	1399306	789624	11	1088,93,112,142,105,100,65,121,110,75,294,	0,1282,1459,3735,3964,4271,6901,8899,11738,12102,12524,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	1386494	1388713	chr1:1386494-1388713	0	-	1386494	1386494	8553170	3	1088,93,760,	0,1282,1459,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	1386498	1399309	chr1:1386498-1399309	0	-	1386498	1386498	789624	13	1084,93,112,118,98,142,105,2038,65,121,110,75,291,	0,1278,1455,2127,2451,3731,3960,4267,6897,8895,11734,12098,12520,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	1386502	1390943	chr1:1386502-1390943	1	-	1387230	1390858	789624	10	1080,93,112,19,118,15,80,57,105,178,	0,1274,1451,1989,2123,2313,3727,3812,3956,4263,
#Partially deleted in new
chr1	1386707	1399311	chr1:1386707-1399311	0	-	1391537	1399306	789624	12	875,93,112,142,105,810,14,65,121,110,75,293,	0,1069,1246,3522,3751,4058,6082,6688,8686,11525,11889,12311,
#Partially deleted in new
chr1	1386712	1392525	chr1:1386712-1392525	0	-	1386712	1386712	8553170	6	870,93,112,142,105,1760,	0,1064,1241,3517,3746,4053,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	1387121	1391649	chr1:1387121-1391649	0	-	1387121	1387121	8553170	9	461,93,112,19,118,142,105,100,353,	0,655,832,1370,1504,3108,3337,3644,4175,
#Partially deleted in new
chr1	1387231	1399328	chr1:1387231-1399328	0	-	1390854	1399306	789624	12	351,93,112,142,105,100,14,65,121,110,75,310,	0,545,722,2998,3227,3534,5558,6164,8162,11001,11365,11787,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	1387542	1390900	chr1:1387542-1390900	0	-	1387542	1387542	8553170	7	40,93,112,118,142,105,135,	0,234,411,1083,2687,2916,3223,
#Partially deleted in new
chr1	1388022	1392716	chr1:1388022-1392716	0	-	1388022	1388022	8553170	6	43,142,105,100,279,38,	0,2207,2436,2743,3274,4656,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	1389345	1391004	chr1:1389345-1391004	0	-	1389345	1389345	8553170	4	128,142,105,239,	0,884,1113,1420,
#Partially deleted in new
chr1	1391152	1398366	chr1:1391152-1398366	0	-	1391152	1391152	8553170	5	401,125,65,121,134,	0,1526,2243,4241,7080,
#Partially deleted in new
chr1	1392287	1399317	chr1:1392287-1399317	1	-	1392781	1399306	789624	6	516,65,121,110,75,299,	0,1108,3106,5945,6309,6731,
#Partially deleted in new
chr1	1393079	1398287	chr1:1393079-1398287	0	-	1393079	1393079	8553170	3	381,121,55,	0,2314,5153,
#Partially deleted in new
chr1	1393443	1399325	chr1:1393443-1399325	0	-	1395475	1399306	789624	5	17,121,110,75,338,	0,1950,4789,5153,5544,
#Partially deleted in new
chr1	1395184	1398287	chr1:1395184-1398287	0	-	1395184	1395184	8553170	2	330,55,	0,3048,
#Partially deleted in new
chr1	1395436	1398956	chr1:1395436-1398956	0	-	1395436	1398665	789624	3	78,110,360,	0,2796,3160,
#Deleted in new
chr1	1399521	1401087	chr1:1399521-1401087	0	+	1399521	1399521	8553170	3	168,146,483,	0,636,1083,
#Deleted in new
chr1	1399526	1402046	chr1:1399526-1402046	0	+	1399526	1399526	789624	3	159,146,1442,	0,631,1078,
#Deleted in new
chr1	1399529	1402026	chr1:1399529-1402026	0	+	1399529	1399529	8553170	2	774,1422,	0,1075,
#Deleted in new
chr1	1399551	1400608	chr1:1399551-1400608	0	+	1399551	1399551	8553170	2	134,451,	0,606,
#Deleted in new
chr1	1399561	1400544	chr1:1399561-1400544	0	+	1399561	1399561	8553170	2	128,387,	0,596,
#Deleted in new
chr1	1399571	1402006	chr1:1399571-1402006	3	+	1399571	1399571	8553170	3	118,323,1402,	0,409,1033,
#Deleted in new
chr1	1399805	1402033	chr1:1399805-1402033	0	+	1399805	1399805	8553170	1	2228,	0,
#Deleted in new
chr1	1400418	1402046	chr1:1400418-1402046	0	+	1400418	1400418	8553170	2	54,804,	0,824,
#Partially deleted in new
chr1	1401907	1407313	chr1:1401907-1407313	3	-	1402082	1407217	0	4	349,78,111,183,	0,3901,5001,5223,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	1401912	1407268	chr1:1401912-1407268	0	-	1401912	1401912	8553170	3	344,1211,138,	0,3896,5218,
#Partially deleted in new
chr1	1402181	1406998	chr1:1402181-1406998	0	-	1402568	1406998	789624	3	420,78,90,	0,3627,4727,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	1405108	1407290	chr1:1405108-1407290	1	-	1405616	1407217	0	3	778,111,160,	0,1800,2022,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	1405459	1405752	chr1:1405459-1405752	3	-	1405459	1405459	8553170	1	293,	0,
#Duplicated in new
chr1	1409095	1410618	chr1:1409095-1410618	3	+	1409095	1409095	8553170	1	1523,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	1418419	1421769	chr1:1418419-1421769	1	-	1419233	1421005	789624	3	1130,209,637,	0,2377,2713,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	1418419	1421444	chr1:1418419-1421444	1	-	1419541	1421005	789624	3	1130,190,312,	0,2396,2713,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	1418421	1421444	chr1:1418421-1421444	3	-	1419099	1421005	789624	4	1128,541,209,312,	0,1630,2375,2711,
#Deleted in new
chr1	1418879	1421091	chr1:1418879-1421091	1	-	1419099	1421005	789624	3	670,541,295,	0,1172,1917,
#Deleted in new
chr1	1419137	1421260	chr1:1419137-1421260	1	-	1419233	1421005	789624	2	412,464,	0,1659,
#Deleted in new
chr1	1420244	1422691	chr1:1420244-1422691	3	+	1420244	1420244	8553170	2	320,223,	0,2224,
#Deleted in new
chr1	1426127	1427787	chr1:1426127-1427787	3	+	1426127	1427787	789624	2	258,234,	0,1426,
#Deleted in new
chr1	1430538	1434573	chr1:1430538-1434573	3	-	1430538	1430538	8553170	2	124,386,	0,3649,
#Deleted in new
chr1	1430549	1431843	chr1:1430549-1431843	0	-	1430549	1430549	8553170	2	405,39,	0,1255,
#Deleted in new
chr1	1430549	1434488	chr1:1430549-1434488	0	-	1430549	1430549	8553170	2	113,311,	0,3628,
#Deleted in new
chr1	1430663	1434520	chr1:1430663-1434520	1	-	1430663	1430663	8553170	2	291,343,	0,3514,
#Deleted in new
chr1	1434860	1437459	chr1:1434860-1437459	0	+	1436958	1437459	789624	2	286,533,	0,2066,
#Deleted in new
chr1	1435522	1440765	chr1:1435522-1440765	1	+	1435748	1437443	789624	3	299,163,1685,	0,1799,3558,
#Deleted in new
chr1	1435670	1442882	chr1:1435670-1442882	3	+	1435748	1439787	789624	3	151,558,3802,	0,1256,3410,
#Deleted in new
chr1	1435734	1437177	chr1:1435734-1437177	0	+	1435748	1437177	789624	2	87,371,	0,1072,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	1449688	1470158	chr1:1449688-1470158	3	+	1450683	1468530	789624	12	1070,77,70,156,60,126,125,52,71,168,109,1775,	0,2357,2676,4656,5771,6102,6536,7440,9472,11061,12911,18695,
#Partially deleted in new
chr1	1449913	1455902	chr1:1449913-1455902	0	+	1450683	1455902	789624	6	128,78,77,70,60,112,	0,767,2132,2451,5546,5877,
#Partially deleted in new
chr1	1462482	1468663	chr1:1462482-1468663	0	+	1462482	1462482	8553170	2	226,280,	0,5901,
#Partially deleted in new
chr1	1471768	1496202	chr1:1471768-1496202	3	+	1471884	1495817	789624	16	321,77,102,60,70,166,70,156,57,126,125,52,71,168,109,718,	0,5505,6875,7280,9098,10369,10776,13247,14013,14341,14775,16094,17435,18488,18794,23716,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	1478025	1497848	chr1:1478025-1497848	0	+	1478025	1478025	8553170	14	720,60,70,166,70,156,57,126,125,52,71,168,109,2364,	0,1023,2841,4112,4519,6990,7756,8084,8518,9837,11178,12231,12537,17459,
#Partially deleted in new
chr1	1479048	1482662	chr1:1479048-1482662	0	+	1479048	1479048	8553170	4	60,70,166,118,	0,1818,3089,3496,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	1483484	1496202	chr1:1483484-1496202	0	+	1483484	1483484	8553170	10	1687,57,126,125,52,71,120,168,109,718,	0,2297,2625,3059,4378,5719,6207,6772,7078,12000,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	1484568	1496201	chr1:1484568-1496201	0	+	1484568	1484568	8553170	5	603,454,125,1468,717,	0,1213,1975,4635,10916,
#Partially deleted in new
chr1	1503249	1509452	chr1:1503249-1509452	7	+	1503249	1503249	16724991	2	412,248,	0,5955,
#Partially deleted in new
chr1	1503581	1509351	chr1:1503581-1509351	5	+	1503581	1503581	16724991	2	80,147,	0,5623,
#Partially deleted in new
chr1	1512150	1534685	chr1:1512150-1534685	1	+	1512268	1534072	789624	16	323,77,102,60,70,166,70,156,57,126,125,52,71,168,109,760,	0,3861,5160,5565,6770,7990,8397,10593,11360,11688,12122,13089,14310,15544,17072,21775,
#Partially deleted in new
chr1	1512174	1534685	chr1:1512174-1534685	3	+	1512268	1534072	789624	16	299,77,246,60,70,166,70,156,57,126,125,52,71,168,109,760,	0,3837,4992,5541,6746,7966,8373,10569,11336,11664,12098,13065,14286,15520,17048,21751,
#Partially deleted in new
chr1	1512529	1534685	chr1:1512529-1534685	0	+	1512529	1534072	789624	16	161,77,102,60,70,166,70,156,57,126,125,52,71,168,109,760,	0,3482,4781,5186,6391,7611,8018,10214,10981,11309,11743,12710,13931,15165,16693,21396,
#Partially deleted in new
chr1	1512529	1534687	chr1:1512529-1534687	1	+	1516043	1534072	789624	16	161,77,102,60,70,166,70,156,57,126,125,52,71,168,109,762,	0,3482,4781,5186,6391,7611,8018,10214,10981,11309,11743,12710,13931,15165,16693,21396,
#Deleted in new
chr1	1517069	1517775	chr1:1517069-1517775	0	+	1517069	1517069	8553170	2	343,60,	0,646,
#Partially deleted in new
chr1	1517620	1522780	chr1:1517620-1522780	0	+	1517620	1517620	8553170	5	155,70,166,70,37,	0,1300,2520,2927,5123,
#Partially deleted in new
chr1	1524272	1529331	chr1:1524272-1529331	0	+	1524272	1529331	789624	6	125,52,71,78,168,109,	0,967,2188,2888,3422,4950,
#Deleted in new
chr1	1535173	1540357	chr1:1535173-1540357	1	-	1535358	1540346	789624	4	334,209,107,68,	0,415,4510,5116,
#Deleted in new
chr1	1535206	1540453	chr1:1535206-1540453	3	-	1535358	1540346	789624	5	301,209,107,66,34,	0,382,4477,5083,5213,
#Deleted in new
chr1	1539055	1540350	chr1:1539055-1540350	1	-	1539679	1540346	789624	2	735,61,	0,1234,
#Partially deleted in new
chr1	1541672	1574869	chr1:1541672-1574869	3	-	1542065	1574557	0	5	495,119,140,144,392,	0,2196,3190,23100,32805,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	1541673	1546487	chr1:1541673-1546487	0	-	1541673	1541673	8553170	3	494,119,1625,	0,2195,3189,
#Partially deleted in new
chr1	1544637	1574587	chr1:1544637-1574587	0	-	1544637	1544637	8553170	3	365,144,110,	0,20135,29840,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	1560847	1574584	chr1:1560847-1574584	1	-	1564534	1574557	0	2	4069,107,	0,13630,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	1574101	1575879	chr1:1574101-1575879	3	+	1574101	1574101	8553170	2	248,593,	0,1185,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	1574974	1577075	chr1:1574974-1577075	0	+	1574974	1574974	8553170	1	2101,	0,
#Partially deleted in new
chr1	1583509	1583909	chr1:1583509-1583909	7	-	1583509	1583509	16724991	1	400,	0,
#Deleted in new
chr1	1598011	1600096	chr1:1598011-1600096	3	-	1599334	1600015	789624	1	2085,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	1613757	1615795	chr1:1613757-1615795	3	-	1613757	1613757	8553170	1	2038,	0,
#Partially deleted in new
chr1	1615414	1630605	chr1:1615414-1630605	1	+	1615459	1630530	789624	20	219,107,311,172,107,195,143,96,105,163,134,149,157,161,127,234,179,182,66,314,	0,1093,7974,8359,9380,9576,9871,10143,11235,11422,11659,11881,12258,12604,12858,13074,13718,13970,14224,14877,
#Partially deleted in new
chr1	1615420	1630610	chr1:1615420-1630610	1	+	1615459	1630530	789624	20	213,107,269,172,107,195,143,108,105,163,134,149,157,161,127,234,179,182,66,319,	0,1087,8010,8353,9374,9570,9865,10125,11229,11416,11653,11875,12252,12598,12852,13068,13712,13964,14218,14871,
#Partially deleted in new
chr1	1615436	1630605	chr1:1615436-1630605	1	+	1615459	1630530	789624	19	197,107,311,172,107,143,108,105,163,134,149,157,161,127,234,179,182,66,314,	0,1071,7952,8337,9358,9849,10109,11213,11400,11637,11859,12236,12582,12836,13052,13696,13948,14202,14855,
#Partially deleted in new
chr1	1615442	1630605	chr1:1615442-1630605	3	+	1615459	1630530	789624	20	191,107,311,172,107,195,143,108,105,163,134,149,157,161,127,234,179,182,66,314,	0,1065,7946,8331,9352,9548,9843,10103,11207,11394,11631,11853,12230,12576,12830,13046,13690,13942,14196,14849,
#Partially deleted in new
chr1	1615453	1630604	chr1:1615453-1630604	0	+	1615453	1615453	8553170	19	180,107,269,172,107,195,143,1209,163,134,149,157,161,127,234,179,182,66,313,	0,1054,7977,8320,9341,9537,9832,10092,11383,11620,11842,12219,12565,12819,13035,13679,13931,14185,14838,
#Partially deleted in new
chr1	1615495	1630604	chr1:1615495-1630604	0	+	1615630	1624805	789624	20	138,107,94,172,107,195,143,108,105,163,134,149,157,161,127,234,179,182,66,313,	0,1012,7893,8278,9299,9495,9790,10050,11154,11341,11578,11800,12177,12523,12777,12993,13637,13889,14143,14796,
#Partially deleted in new
chr1	1615513	1630604	chr1:1615513-1630604	0	+	1615513	1615513	8553170	19	120,107,311,172,107,195,143,108,105,163,134,149,157,381,234,179,182,66,313,	0,994,7875,8260,9281,9477,9772,10032,11136,11323,11560,11782,12159,12505,12975,13619,13871,14125,14778,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	1615515	1619210	chr1:1615515-1619210	0	+	1615515	1615515	8553170	2	118,2703,	0,992,
#Partially deleted in new
chr1	1615529	1625040	chr1:1615529-1625040	0	+	1615630	1624805	789624	6	104,107,52,172,107,50,	0,978,7901,8244,9265,9461,
#Partially deleted in new
chr1	1615878	1630604	chr1:1615878-1630604	0	+	1623410	1629495	789624	21	222,107,311,172,107,195,143,108,105,163,134,149,157,161,127,234,179,20,79,66,313,	0,629,7510,7895,8916,9112,9407,9667,10771,10958,11195,11417,11794,12140,12394,12610,13254,13506,13609,13760,14413,
#Partially deleted in new
chr1	1615886	1624832	chr1:1615886-1624832	0	+	1623452	1623801	789624	5	214,107,249,172,38,	0,621,7544,7887,8908,
#Partially deleted in new
chr1	1615904	1630604	chr1:1615904-1630604	1	+	1623452	1630301	789624	18	196,107,269,172,107,143,108,105,163,134,149,157,161,127,234,179,66,313,	0,603,7526,7869,8890,9381,9641,10745,10932,11169,11391,11768,12114,12368,12584,13228,13734,14387,
#Deleted in new
chr1	1615913	1617898	chr1:1615913-1617898	0	+	1615913	1615913	8553170	2	187,1391,	0,594,
#Deleted in new
chr1	1615967	1617323	chr1:1615967-1617323	0	+	1615967	1615967	8553170	3	133,107,246,	0,540,1110,
#Partially deleted in new
chr1	1616273	1624901	chr1:1616273-1624901	0	+	1623452	1624901	789624	4	341,269,172,107,	0,7157,7500,8521,
#Partially deleted in new
chr1	1616309	1630604	chr1:1616309-1630604	1	+	1623410	1630530	789624	19	305,311,172,107,195,143,108,105,163,134,149,157,161,127,234,179,182,66,313,	0,7079,7464,8485,8681,8976,9236,10340,10527,10764,10986,11363,11709,11963,12179,12823,13075,13329,13982,
#Partially deleted in new
chr1	1616310	1629163	chr1:1616310-1629163	0	+	1616310	1616310	8553170	14	304,311,172,107,195,143,105,163,134,149,157,161,450,31,	0,7078,7463,8484,8680,8975,10339,10526,10763,10985,11362,11708,11962,12822,
#Partially deleted in new
chr1	1617407	1624821	chr1:1617407-1624821	0	+	1623452	1624821	789624	4	108,269,172,27,	0,6023,6366,7387,
#Partially deleted in new
chr1	1617559	1630604	chr1:1617559-1630604	1	+	1623452	1630530	789624	18	156,269,172,107,195,143,105,163,134,149,157,161,127,234,179,182,66,313,	0,5871,6214,7235,7431,7726,9090,9277,9514,9736,10113,10459,10713,10929,11573,11825,12079,12732,
#Partially deleted in new
chr1	1617576	1630532	chr1:1617576-1630532	0	+	1623452	1627055	789624	17	139,269,172,107,195,143,105,371,149,157,161,127,234,179,182,66,241,	0,5854,6197,7218,7414,7709,9073,9260,9719,10096,10442,10696,10912,11556,11808,12062,12715,
#Deleted in new
chr1	1623121	1624859	chr1:1623121-1624859	0	+	1623121	1623121	8553170	3	361,172,65,	0,652,1673,
#Deleted in new
chr1	1623580	1624209	chr1:1623580-1624209	0	+	1623580	1623580	8553170	2	119,436,	0,193,
#Deleted in new
chr1	1623801	1630604	chr1:1623801-1630604	0	+	1623801	1630530	789624	16	144,107,195,143,108,163,134,149,157,161,127,234,179,182,66,313,	0,993,1189,1484,1744,3035,3272,3494,3871,4217,4471,4687,5331,5583,5837,6490,
#Deleted in new
chr1	1624743	1625799	chr1:1624743-1625799	0	+	1624743	1624743	8553170	4	158,221,143,254,	0,221,542,802,
#Deleted in new
chr1	1625086	1625763	chr1:1625086-1625763	0	+	1625086	1625086	8553170	2	99,478,	0,199,
#Deleted in new
chr1	1625566	1626929	chr1:1625566-1626929	0	+	1625566	1626453	789624	3	87,388,93,	0,800,1270,
#Deleted in new
chr1	1626859	1627830	chr1:1626859-1627830	0	+	1626859	1626859	8553170	3	140,134,535,	0,214,436,
#Deleted in new
chr1	1627459	1629552	chr1:1627459-1629552	0	+	1627459	1627459	8553170	5	370,381,234,179,168,	0,559,1029,1673,1925,
#Deleted in new
chr1	1627521	1629270	chr1:1627521-1629270	0	+	1627521	1627521	8553170	5	308,161,127,234,138,	0,497,751,967,1611,
#Deleted in new
chr1	1628488	1630589	chr1:1628488-1630589	0	+	1628488	1630530	789624	5	234,278,182,66,298,	0,545,896,1150,1803,
#Deleted in new
chr1	1629105	1630603	chr1:1629105-1630603	0	+	1629105	1629105	8553170	3	206,66,312,	0,533,1186,
#Deleted in new
chr1	1629472	1630605	chr1:1629472-1630605	0	+	1629472	1629472	8553170	2	232,314,	0,819,
#Deleted in new
chr1	1632094	1634654	chr1:1632094-1634654	3	+	1632218	1634625	789624	8	280,131,140,168,165,111,127,204,	0,688,886,1093,1653,1894,2107,2356,
#Deleted in new
chr1	1632162	1633120	chr1:1632162-1633120	0	+	1632218	1633120	789624	3	212,204,140,	0,547,818,
#Deleted in new
chr1	1632177	1634474	chr1:1632177-1634474	0	+	1632218	1633477	789624	6	197,131,140,912,127,24,	0,605,803,1010,2024,2273,
#Deleted in new
chr1	1632178	1634654	chr1:1632178-1634654	1	+	1632218	1634546	789624	7	196,131,375,165,111,127,204,	0,604,802,1569,1810,2023,2272,
#Deleted in new
chr1	1632782	1634651	chr1:1632782-1634651	0	+	1632782	1634546	789624	6	131,168,165,111,127,201,	0,405,965,1206,1419,1668,
#Deleted in new
chr1	1633202	1634568	chr1:1633202-1634568	0	+	1633202	1634546	789624	4	153,352,127,118,	0,545,999,1248,
#Deleted in new
chr1	1633202	1634568	chr1:1633202-1634568	0	+	1633202	1634546	789624	5	278,165,111,127,118,	0,545,786,999,1248,
#Deleted in new
chr1	1633678	1634604	chr1:1633678-1634604	0	+	1633678	1633678	8553170	4	234,111,127,154,	0,310,523,772,
#Deleted in new
chr1	1634001	1634608	chr1:1634001-1634608	0	+	1634001	1634001	8553170	2	327,158,	0,449,
#Deleted in new
chr1	1634239	1635263	chr1:1634239-1635263	0	+	1634239	1634625	789624	3	89,336,105,	0,211,919,
#Partially deleted in new
chr1	1635226	1659012	chr1:1635226-1659012	1	-	1635763	1657485	789624	20	630,190,149,117,108,122,106,122,91,176,66,159,96,123,137,139,128,116,124,99,	0,710,1106,1455,1670,1854,2181,2535,3273,5050,5821,6435,6679,7159,9899,14272,17212,20142,22148,23687,
#Partially deleted in new
chr1	1635586	1659012	chr1:1635586-1659012	3	-	1635763	1657485	789624	20	270,190,149,117,108,122,106,122,91,176,66,159,96,162,137,139,128,116,124,99,	0,350,746,1095,1310,1494,1821,2175,2913,4690,5461,6075,6319,6760,9539,13912,16852,19782,21788,23327,
#Partially deleted in new
chr1	1635737	1659012	chr1:1635737-1659012	1	-	1635763	1657264	789624	21	119,190,149,117,108,122,106,122,91,176,66,159,96,123,137,139,128,116,47,124,99,	0,199,595,944,1159,1343,1670,2024,2762,4539,5310,5924,6168,6648,9388,13761,16701,19631,21518,21637,23176,
#Partially deleted in new
chr1	1635737	1659012	chr1:1635737-1659012	0	-	1641798	1657485	789624	19	119,190,149,117,108,122,106,122,91,176,66,159,96,123,139,128,116,124,99,	0,199,595,944,1159,1343,1670,2024,2762,4539,5310,5924,6168,6648,13761,16701,19631,21637,23176,
#Partially deleted in new
chr1	1635737	1659012	chr1:1635737-1659012	0	-	1641798	1657485	789624	18	119,190,149,117,108,122,106,122,91,176,66,159,96,139,128,116,124,99,	0,199,595,944,1159,1343,1670,2024,2762,4539,5310,5924,6168,13761,16701,19631,21637,23176,
#Partially deleted in new
chr1	1641771	1658972	chr1:1641771-1658972	0	-	1641771	1641771	8553170	9	49,96,123,139,128,116,47,124,59,	0,134,614,7727,10667,13597,15484,15603,17142,
#Partially deleted in new
chr1	1659324	1662602	chr1:1659324-1662602	3	+	1659324	1659324	8553170	2	128,272,	0,3006,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	1659528	1692724	chr1:1659528-1692724	1	-	1660102	1676699	789624	7	583,146,128,136,469,418,276,	0,8798,15934,16535,16849,31447,32920,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	1661477	1692644	chr1:1661477-1692644	1	-	1665781	1676699	789624	10	4542,146,73,54,121,128,136,469,418,196,	0,6849,8186,8620,10031,13985,14586,14900,29498,30971,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	1661478	1692728	chr1:1661478-1692728	3	-	1665781	1676699	789624	9	4541,146,73,54,121,128,136,469,280,	0,6848,8185,8619,10030,13984,14585,14899,30970,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	1663781	1670139	chr1:1663781-1670139	0	-	1663781	1663781	8553170	3	2238,146,476,	0,4545,5882,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	1670424	1692709	chr1:1670424-1692709	0	-	1670424	1670424	8553170	5	1205,128,136,469,261,	0,5038,5639,5953,22024,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	1671989	1673411	chr1:1671989-1673411	7	+	1671989	1671989	16724991	1	1422,	0,
#Partially deleted in new
chr1	1673274	1674397	chr1:1673274-1674397	5	+	1673274	1673274	16724991	2	105,397,	0,726,
#Deleted in new
chr1	1699941	1701782	chr1:1699941-1701782	7	+	1699941	1699941	16724991	7	131,140,168,165,111,127,175,	0,198,405,965,1206,1419,1666,
#Partially deleted in new
chr1	1702729	1722831	chr1:1702729-1722831	1	-	1702906	1722596	789624	19	270,190,149,117,108,122,106,122,91,176,66,159,96,123,137,133,128,116,244,	0,350,746,1094,1309,1493,1820,2174,2912,4679,5450,6064,6308,6788,9534,13616,16598,18866,19858,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	1702735	1737688	chr1:1702735-1737688	3	-	1702735	1702735	8553170	20	264,190,149,172,122,106,122,91,60,66,159,96,123,137,133,98,116,244,146,2485,	0,344,740,1088,1487,1814,2168,2906,4789,5444,6058,6302,6782,9528,13610,16622,18860,19852,31954,32468,
#Deleted in new
chr1	1702765	1704253	chr1:1702765-1704253	0	-	1702765	1702765	8553170	5	234,190,465,108,31,	0,314,710,1273,1457,
#Partially deleted in new
chr1	1702880	1721655	chr1:1702880-1721655	0	-	1702880	1702880	8553170	17	119,190,149,117,306,106,122,91,176,66,159,96,123,164,133,98,60,	0,199,595,943,1158,1669,2023,2761,4528,5299,5913,6157,6637,9383,13465,16477,18715,
#Partially deleted in new
chr1	1702880	1724324	chr1:1702880-1724324	1	-	1702906	1722818	789624	20	119,190,149,117,108,122,106,122,91,176,66,159,96,123,164,133,98,116,124,67,	0,199,595,943,1158,1342,1669,2023,2761,4528,5299,5913,6157,6637,9383,13465,16477,18715,19827,21377,
#Partially deleted in new
chr1	1702880	1724324	chr1:1702880-1724324	1	-	1702906	1722818	789624	20	119,190,149,117,108,122,106,122,91,176,66,159,96,123,137,133,98,116,124,67,	0,199,595,943,1158,1342,1669,2023,2761,4528,5299,5913,6157,6637,9383,13465,16477,18715,19827,21377,
#Partially deleted in new
chr1	1702880	1724324	chr1:1702880-1724324	1	-	1702906	1722818	789624	20	119,190,149,117,108,122,106,122,91,176,66,159,96,162,137,133,98,116,124,67,	0,199,595,943,1158,1342,1669,2023,2761,4528,5299,5913,6157,6598,9383,13465,16477,18715,19827,21377,
#Partially deleted in new
chr1	1702880	1722831	chr1:1702880-1722831	1	-	1702906	1722596	789624	20	119,190,149,117,108,122,106,122,91,176,66,159,96,123,137,133,128,116,47,124,	0,199,595,943,1158,1342,1669,2023,2761,4528,5299,5913,6157,6637,9383,13465,16447,18715,19707,19827,
#Partially deleted in new
chr1	1702880	1724324	chr1:1702880-1724324	3	-	1702906	1722818	789624	20	119,190,149,117,108,122,106,122,91,176,66,159,96,123,137,133,128,116,124,67,	0,199,595,943,1158,1342,1669,2023,2761,4528,5299,5913,6157,6637,9383,13465,16447,18715,19827,21377,
#Partially deleted in new
chr1	1702880	1724324	chr1:1702880-1724324	0	-	1705021	1722818	789624	20	119,190,149,117,108,122,106,122,91,60,66,159,96,123,137,133,128,116,124,67,	0,199,595,943,1158,1342,1669,2023,2761,4644,5299,5913,6157,6637,9383,13465,16447,18715,19827,21377,
#Partially deleted in new
chr1	1702880	1722832	chr1:1702880-1722832	0	-	1705021	1722818	789624	19	119,190,149,117,108,122,106,122,91,60,66,159,96,162,137,133,128,116,125,	0,199,595,943,1158,1342,1669,2023,2761,4644,5299,5913,6157,6598,9383,13465,16447,18715,19827,
#Deleted in new
chr1	1703087	1704555	chr1:1703087-1704555	0	-	1703087	1703087	8553170	4	182,149,172,333,	0,388,736,1135,
#Deleted in new
chr1	1703087	1704116	chr1:1703087-1704116	0	-	1703087	1703087	8553170	2	853,78,	0,951,
#Deleted in new
chr1	1703603	1704602	chr1:1703603-1704602	0	-	1703603	1703603	8553170	4	21,117,108,380,	0,220,435,619,
#Deleted in new
chr1	1703867	1704585	chr1:1703867-1704585	0	-	1703867	1703867	8553170	3	128,122,36,	0,355,682,
#Partially deleted in new
chr1	1704048	1707561	chr1:1704048-1707561	0	-	1704048	1704048	8553170	5	98,433,122,91,153,	0,174,855,1593,3360,
#Deleted in new
chr1	1704098	1704760	chr1:1704098-1704760	0	-	1704098	1704098	8553170	3	48,122,211,	0,124,451,
#Deleted in new
chr1	1704242	1705024	chr1:1704242-1705024	0	-	1704242	1704242	8553170	2	102,475,	0,307,
#Partially deleted in new
chr1	1704349	1708876	chr1:1704349-1708876	0	-	1704349	1704349	8553170	5	676,91,60,66,83,	0,1292,3175,3830,4444,
#Partially deleted in new
chr1	1704607	1708231	chr1:1704607-1708231	0	-	1704607	1704607	8553170	4	418,91,191,52,	0,1034,2801,3572,
#Partially deleted in new
chr1	1716349	1724032	chr1:1716349-1724032	0	-	1716349	1722818	789624	5	129,98,116,124,233,	0,3008,5246,6358,7450,
#Partially deleted in new
chr1	1719165	1721879	chr1:1719165-1721879	0	-	1719165	1719165	8553170	2	290,284,	0,2430,
#Partially deleted in new
chr1	1722465	1724019	chr1:1722465-1724019	0	-	1722465	1722465	8553170	2	366,71,	0,1483,
#Partially deleted in new
chr1	1722707	1724274	chr1:1722707-1724274	0	-	1722707	1722818	789624	2	124,326,	0,1241,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	1724511	1735973	chr1:1724511-1735973	7	+	1724511	1724511	16724991	2	252,157,	0,11305,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	1724614	1731904	chr1:1724614-1731904	4	+	1724614	1724614	16724991	2	149,1659,	0,5631,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	1724837	1745919	chr1:1724837-1745919	0	-	1724837	1724837	8553170	7	585,146,128,136,469,418,196,	0,9852,13483,14084,14398,19413,20886,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	1724839	1745999	chr1:1724839-1745999	1	-	1725413	1739557	789624	7	583,146,128,136,469,418,276,	0,9850,13481,14082,14396,19411,20884,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	1727385	1745999	chr1:1727385-1745999	3	-	1732454	1739557	789624	6	5138,146,128,136,469,276,	0,7304,10935,11536,11850,18338,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	1731827	1735620	chr1:1731827-1735620	0	-	1731827	1731827	8553170	3	696,146,417,	0,2862,3376,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	1732241	1745992	chr1:1732241-1745992	0	-	1732241	1732241	8553170	6	282,146,128,136,469,269,	0,2448,6079,6680,6994,13482,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	1732553	1735975	chr1:1732553-1735975	4	+	1732553	1732553	16724991	2	291,159,	0,3263,
#Partially deleted in new
chr1	1734689	1739557	chr1:1734689-1739557	4	-	1734689	1734689	16724991	4	146,128,136,322,	0,3631,4232,4546,
#Partially deleted in new
chr1	1735816	1737251	chr1:1735816-1737251	5	+	1735816	1735816	16724991	2	99,398,	0,1037,
#Partially deleted in new
chr1	1751231	1778470	chr1:1751231-1778470	1	-	1752903	1765406	0	12	1829,83,158,100,155,103,86,106,130,84,219,182,	0,2335,2819,3052,3312,4142,5026,5271,5949,10720,13996,27057,
#Partially deleted in new
chr1	1751231	1778790	chr1:1751231-1778790	3	-	1752903	1765406	0	12	1829,83,158,100,155,103,86,106,130,84,219,45,	0,2335,2819,3052,3312,4142,5026,5271,5949,10720,13996,27514,
#Partially deleted in new
chr1	1751231	1780069	chr1:1751231-1780069	1	-	1752903	1765406	0	14	1829,83,158,100,155,103,86,155,204,143,169,84,219,165,	0,2335,2819,3052,3312,4142,5026,5271,5875,7869,8502,10720,13996,28673,
#Partially deleted in new
chr1	1752470	1758575	chr1:1752470-1758575	0	-	1752903	1758531	789624	10	590,83,158,100,155,103,86,106,130,211,	0,1096,1580,1813,2073,2903,3787,4032,4710,5894,
#Deleted in new
chr1	1752974	1754383	chr1:1752974-1754383	0	-	1753632	1754383	789624	3	86,83,100,	0,592,1309,
#Partially deleted in new
chr1	1754060	1757268	chr1:1754060-1757268	0	-	1756837	1757268	789624	8	148,100,155,103,86,106,104,88,	0,223,483,1313,2197,2442,2718,3120,
#Partially deleted in new
chr1	1754162	1756327	chr1:1754162-1756327	0	-	1754162	1754162	8553170	4	221,155,103,70,	0,381,1211,2095,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	1754164	1754866	chr1:1754164-1754866	0	-	1754164	1754164	8553170	3	44,100,323,	0,119,379,
#Partially deleted in new
chr1	1754170	1757024	chr1:1754170-1757024	0	-	1754170	1754170	8553170	6	38,100,155,103,86,522,	0,113,373,1203,2087,2332,
#Partially deleted in new
chr1	1754180	1756608	chr1:1754180-1756608	0	-	1754665	1756608	789624	5	28,100,155,86,106,	0,103,363,2077,2322,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	1754202	1754896	chr1:1754202-1754896	0	-	1754202	1754202	8553170	2	181,353,	0,341,
#Partially deleted in new
chr1	1754342	1757228	chr1:1754342-1757228	0	-	1756837	1757228	789624	7	41,155,103,86,106,144,48,	0,201,1031,1915,2160,2396,2838,
#Partially deleted in new
chr1	1756003	1779962	chr1:1756003-1779962	0	-	1756003	1756003	8553170	6	340,106,130,84,219,58,	0,499,1177,5948,9224,23901,
#Partially deleted in new
chr1	1756587	1778419	chr1:1756587-1778419	0	-	1756587	1756587	8553170	5	295,130,84,219,131,	0,593,5364,8640,21701,
#Partially deleted in new
chr1	1756770	1778419	chr1:1756770-1778419	0	-	1756770	1756770	8553170	4	540,84,219,131,	0,5181,8457,21518,
#Partially deleted in new
chr1	1761664	1778420	chr1:1761664-1778420	0	-	1761664	1761664	8553170	3	371,219,132,	0,3563,16624,
#Partially deleted in new
chr1	1779156	1780457	chr1:1779156-1780457	0	-	1779156	1779156	8553170	3	40,125,176,	0,748,1125,
#Partially deleted in new
chr1	1785284	1891117	chr1:1785284-1891117	3	-	1787330	1825453	0	11	1769,116,217,202,67,163,64,107,39,103,298,	0,2037,3768,5110,7960,19134,21190,30471,32552,40112,105535,
#Partially deleted in new
chr1	1785284	1891117	chr1:1785284-1891117	1	-	1787330	1804548	789624	10	1769,116,217,202,67,163,64,103,49,298,	0,2037,3768,5110,7960,19134,21190,40112,53905,105535,
#Partially deleted in new
chr1	1785285	1891056	chr1:1785285-1891056	1	-	1787330	1825453	0	12	1768,116,217,202,67,163,64,107,39,103,49,237,	0,2036,3767,5109,7959,19133,21189,30470,32551,40111,53904,105534,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	1787986	1794197	chr1:1787986-1794197	0	-	1787986	1787986	8553170	3	1283,202,953,	0,2408,5258,
#Partially deleted in new
chr1	1789060	1818386	chr1:1789060-1818386	0	-	1789060	1789060	8553170	7	209,202,67,163,64,107,700,	0,1334,4184,15358,17414,26695,28626,
#Partially deleted in new
chr1	1790564	1890836	chr1:1790564-1890836	0	-	1790564	1825453	789624	8	32,67,163,64,107,103,49,17,	0,2680,13854,15910,25191,34832,48625,100255,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	1793244	1890401	chr1:1793244-1890401	0	-	1793244	1825453	789624	9	67,163,64,107,39,103,49,54,38,	0,11174,13230,22511,24592,32152,45945,46384,97119,
#Partially deleted in new
chr1	1804525	1832285	chr1:1804525-1832285	0	-	1804525	1825453	789624	6	56,64,107,39,103,54,	0,1949,11230,13311,20871,27706,
#Partially deleted in new
chr1	1824987	1890966	chr1:1824987-1890966	0	-	1824987	1824987	8553170	3	512,49,147,	0,14202,65832,
#Deleted in new
chr1	1824987	1825554	chr1:1824987-1825554	0	-	1824987	1824987	8553170	1	567,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	1891470	1892658	chr1:1891470-1892658	3	+	1891470	1891470	8553170	2	381,525,	0,663,
#Deleted in new
chr1	1914826	1917294	chr1:1914826-1917294	3	+	1915280	1917193	789624	6	481,51,175,145,101,148,	0,858,1614,1925,2147,2320,
#Deleted in new
chr1	1915107	1917294	chr1:1915107-1917294	0	+	1915280	1917193	789624	5	200,175,145,101,148,	0,1333,1644,1866,2039,
#Deleted in new
chr1	1915265	1917296	chr1:1915265-1917296	0	+	1915265	1915265	8553170	3	1631,101,150,	0,1708,1881,
#Deleted in new
chr1	1915408	1917071	chr1:1915408-1917071	0	+	1915408	1915408	8553170	3	327,145,98,	0,1343,1565,
#Deleted in new
chr1	1917589	1918797	chr1:1917589-1918797	1	-	1917881	1918556	789624	2	573,545,	0,663,
#Deleted in new
chr1	1917590	1919273	chr1:1917590-1919273	3	-	1917881	1919265	789624	5	572,179,42,44,92,	0,662,1302,1454,1591,
#Deleted in new
chr1	1917844	1919258	chr1:1917844-1919258	0	-	1917952	1919258	789624	3	227,42,214,	0,1048,1200,
#Deleted in new
chr1	1917936	1919270	chr1:1917936-1919270	0	-	1919040	1919265	789624	4	226,179,196,89,	0,316,956,1245,
#Deleted in new
chr1	1918098	1919269	chr1:1918098-1919269	0	-	1918098	1918098	8553170	4	64,682,44,88,	0,154,946,1083,
#Deleted in new
chr1	1918385	1919269	chr1:1918385-1919269	0	-	1918385	1919265	789624	3	46,42,225,	0,507,659,
#Partially deleted in new
chr1	1921950	2003837	chr1:1921950-2003837	3	-	1922286	1990956	789624	38	438,131,133,155,130,156,120,56,110,135,140,99,277,134,174,88,129,122,123,65,160,165,90,67,119,174,156,199,158,103,111,174,105,99,144,85,86,137,	0,1034,1416,1824,2440,3832,4277,4506,4701,4943,5656,6833,8109,16904,17643,18365,20077,22380,24366,25039,33740,34669,37169,38013,41798,42937,44420,46684,48708,50029,50986,52074,63435,64986,66561,66938,68939,81750,
#Partially deleted in new
chr1	1921950	1959974	chr1:1921950-1959974	0	-	1922286	1959974	789624	25	438,135,131,133,155,130,156,120,56,110,135,140,99,277,134,174,88,129,122,123,65,160,165,90,11,	0,638,1034,1416,1824,2440,3832,4277,4506,4701,4943,5656,6833,8109,16904,17643,18365,20077,22380,24366,25039,33740,34669,37169,38013,
#Deleted in new
chr1	1921956	1927929	chr1:1921956-1927929	0	-	1921956	1921956	8553170	10	432,135,161,133,155,130,156,120,56,1278,	0,632,1028,1410,1818,2434,3826,4271,4500,4695,
#Deleted in new
chr1	1922082	1927403	chr1:1922082-1927403	0	-	1922082	1922082	8553170	11	306,135,161,133,155,130,156,120,56,110,510,	0,506,902,1284,1692,2308,3700,4145,4374,4569,4811,
#Partially deleted in new
chr1	1946347	1960106	chr1:1946347-1960106	0	-	1946347	1946347	8553170	5	92,65,160,90,143,	0,642,9343,12772,13616,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	1953312	2003837	chr1:1953312-2003837	0	-	1953312	1953312	8553170	18	2538,165,90,67,119,174,156,199,158,103,111,174,105,99,144,85,86,137,	0,3307,5807,6651,10436,11575,13058,15322,17346,18667,19624,20712,32073,33624,35199,35576,37577,50388,
#Partially deleted in new
chr1	1955147	2003714	chr1:1955147-2003714	0	-	1955147	1955147	8553170	19	376,160,165,90,67,119,174,156,199,158,103,111,174,105,99,144,85,86,14,	0,543,1472,3972,4816,8601,9740,11223,13487,15511,16832,17789,18877,30238,31789,33364,33741,35742,48553,
#Partially deleted in new
chr1	1955710	1960108	chr1:1955710-1960108	0	-	1955710	1955710	8553170	4	140,165,90,145,	0,909,3409,4253,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	1983670	2003837	chr1:1983670-2003837	0	-	1983670	1983670	8553170	7	1442,152,99,144,85,86,137,	0,1668,3266,4841,5218,7219,20030,
#Partially deleted in new
chr1	1987961	1990929	chr1:1987961-1990929	0	-	1988123	1990929	789624	4	172,144,85,40,	0,550,927,2928,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	2013212	2015530	chr1:2013212-2015530	3	-	2013212	2013212	8553170	2	1788,166,	0,2152,
#Partially deleted in new
chr1	2019297	2030758	chr1:2019297-2030758	3	+	2019423	2030282	789624	9	194,113,68,221,83,138,156,212,776,	0,5644,6036,6220,8279,8857,9813,10253,10685,
#Partially deleted in new
chr1	2019328	2030079	chr1:2019328-2030079	0	+	2019423	2030079	789624	9	163,113,99,221,83,138,156,212,97,	0,5613,6005,6189,8248,8826,9782,10222,10654,
#Partially deleted in new
chr1	2019359	2030741	chr1:2019359-2030741	0	+	2019359	2019359	8553170	8	132,113,68,221,716,156,212,759,	0,5582,5974,6158,8217,9751,10191,10623,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	2019359	2030012	chr1:2019359-2030012	0	+	2019423	2023836	789624	10	132,94,113,68,221,83,138,156,212,30,	0,4437,5582,5974,6158,8217,8795,9751,10191,10623,
#Partially deleted in new
chr1	2019359	2030407	chr1:2019359-2030407	1	+	2019423	2030282	789624	9	132,113,68,221,83,222,156,212,425,	0,5582,5974,6158,8217,8711,9751,10191,10623,
#Partially deleted in new
chr1	2019378	2030365	chr1:2019378-2030365	1	+	2019423	2030206	789624	8	113,113,68,221,83,138,156,815,	0,5563,5955,6139,8198,8776,9732,10172,
#Partially deleted in new
chr1	2019386	2025792	chr1:2019386-2025792	0	+	2019386	2019386	8553170	4	105,113,68,275,	0,5555,5947,6131,
#Partially deleted in new
chr1	2019403	2030656	chr1:2019403-2030656	1	+	2019423	2030282	789624	9	88,113,68,221,83,138,156,143,674,	0,5538,5930,6114,8173,8751,9707,10216,10579,
#Partially deleted in new
chr1	2019483	2030717	chr1:2019483-2030717	0	+	2019483	2030282	789624	8	8,113,68,221,83,138,212,735,	0,5458,5850,6034,8093,8671,10067,10499,
#Partially deleted in new
chr1	2022314	2030086	chr1:2022314-2030086	0	+	2022314	2022314	8553170	9	77,113,68,221,83,138,156,212,104,	0,2627,3019,3203,5262,5840,6796,7236,7668,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	2023560	2024223	chr1:2023560-2024223	0	+	2023560	2023560	8553170	1	663,	0,
#Partially deleted in new
chr1	2024269	2030712	chr1:2024269-2030712	0	+	2024269	2024269	8553170	8	785,68,221,83,138,156,212,730,	0,1064,1248,3307,3885,4841,5281,5713,
#Partially deleted in new
chr1	2025345	2029714	chr1:2025345-2029714	0	+	2025345	2029714	789624	6	56,221,83,138,298,164,	0,172,2231,2809,3765,4205,
#Partially deleted in new
chr1	2025525	2029185	chr1:2025525-2029185	0	+	2025525	2029185	789624	4	213,83,133,75,	0,2051,2629,3585,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	2026527	2030515	chr1:2026527-2030515	0	+	2026527	2026527	8553170	5	1132,138,156,212,533,	0,1627,2583,3023,3455,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	2026894	2030292	chr1:2026894-2030292	0	+	2026894	2026894	8553170	4	1398,156,172,310,	0,2216,2696,3088,
#Partially deleted in new
chr1	2027252	2030152	chr1:2027252-2030152	0	+	2027252	2027252	8553170	4	1040,156,212,170,	0,1858,2298,2730,
#Partially deleted in new
chr1	2027628	2030008	chr1:2027628-2030008	0	+	2027628	2029992	789624	5	31,138,156,172,26,	0,526,1482,1962,2354,
#Partially deleted in new
chr1	2028918	2030717	chr1:2028918-2030717	0	+	2028918	2028918	8553170	3	348,212,735,	0,632,1064,
#Deleted in new
chr1	2049202	2049651	chr1:2049202-2049651	0	-	2049202	2049202	8553170	2	266,54,	0,395,
#Deleted in new
chr1	2049303	2050070	chr1:2049303-2050070	3	-	2049303	2049303	789624	3	165,69,203,	0,294,564,
#Partially deleted in new
chr1	2050469	2185395	chr1:2050469-2185395	2	+	2050630	2185009	789624	18	232,122,90,51,86,132,82,53,189,98,87,136,88,120,80,90,116,474,	0,4971,6014,9071,84792,93740,95557,98402,100320,105525,119048,121585,121831,123427,124284,124754,134113,134452,
#Partially deleted in new
chr1	2050484	2146108	chr1:2050484-2146108	0	+	2050630	2146108	789624	6	217,122,51,86,132,82,	0,4956,9056,84777,93725,95542,
#Partially deleted in new
chr1	2050502	2055760	chr1:2050502-2055760	0	+	2050502	2050502	8553170	2	199,320,	0,4938,
#Partially deleted in new
chr1	2050807	2059591	chr1:2050807-2059591	0	+	2055507	2059591	789624	4	205,122,90,51,	0,4633,5676,8733,
#Partially deleted in new
chr1	2055440	2071536	chr1:2055440-2071536	0	+	2055440	2055440	8553170	4	122,90,51,238,	0,1043,4100,15858,
#Partially deleted in new
chr1	2055678	2135347	chr1:2055678-2135347	0	+	2055678	2055678	8553170	4	198,90,51,86,	0,805,3862,79583,
#Partially deleted in new
chr1	2073461	2185390	chr1:2073461-2185390	1	+	2144338	2185009	789624	15	468,86,132,82,53,189,98,87,136,88,120,80,90,116,469,	0,61800,70748,72565,75410,77328,82533,96056,98593,98839,100435,101292,101762,111121,111460,
#Partially deleted in new
chr1	2073718	2146086	chr1:2073718-2146086	0	+	2144338	2146086	789624	5	211,209,86,132,60,	0,24628,61543,70491,72308,
#Partially deleted in new
chr1	2073985	2185190	chr1:2073985-2185190	0	+	2074253	2185009	789624	15	290,86,132,82,53,189,98,87,136,88,120,80,90,116,269,	0,61276,70224,72041,74886,76804,82009,95532,98069,98315,99911,100768,101238,110597,110936,
#Partially deleted in new
chr1	2074687	2150836	chr1:2074687-2150836	0	+	2144338	2150836	789624	6	80,86,132,82,53,47,	0,60574,69522,71339,74184,76102,
#Partially deleted in new
chr1	2074854	2150945	chr1:2074854-2150945	0	+	2144338	2150945	789624	6	279,86,132,82,53,156,	0,60407,69355,71172,74017,75935,
#Partially deleted in new
chr1	2075243	2150863	chr1:2075243-2150863	0	+	2144338	2150863	789624	6	136,86,132,82,53,74,	0,60018,68966,70783,73628,75546,
#Partially deleted in new
chr1	2082247	2150936	chr1:2082247-2150936	0	+	2082320	2135343	789624	6	213,86,132,82,53,147,	0,53014,61962,63779,66624,68542,
#Partially deleted in new
chr1	2104715	2150870	chr1:2104715-2150870	0	+	2144338	2150870	789624	6	180,86,132,82,53,81,	0,30546,39494,41311,44156,46074,
#Partially deleted in new
chr1	2104738	2156087	chr1:2104738-2156087	0	+	2146035	2156087	789624	8	157,86,132,174,82,53,189,93,	0,30523,39471,40599,41288,44133,46051,51256,
#Partially deleted in new
chr1	2111653	2150978	chr1:2111653-2150978	0	+	2144338	2150978	789624	6	164,86,132,82,53,189,	0,23608,32556,34373,37218,39136,
#Partially deleted in new
chr1	2116204	2150897	chr1:2116204-2150897	0	+	2144338	2150897	789624	6	106,86,132,82,53,108,	0,19057,28005,29822,32667,34585,
#Partially deleted in new
chr1	2133637	2148924	chr1:2133637-2148924	0	+	2144338	2148924	789624	5	363,86,132,82,53,	0,1624,10572,12389,15234,
#Partially deleted in new
chr1	2134812	2146098	chr1:2134812-2146098	0	+	2144338	2146098	789624	4	274,86,132,72,	0,449,9397,11214,
#Partially deleted in new
chr1	2134989	2150979	chr1:2134989-2150979	0	+	2146035	2150979	789624	7	97,86,132,123,82,53,190,	0,272,9220,10399,11037,13882,15800,
#Partially deleted in new
chr1	2135261	2150865	chr1:2135261-2150865	0	+	2135261	2135261	8553170	4	86,132,53,76,	0,8948,13610,15528,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	2141083	2145279	chr1:2141083-2145279	3	-	2141083	2141083	8553170	1	4196,	0,
#Partially deleted in new
chr1	2144450	2185395	chr1:2144450-2185395	0	+	2144450	2144450	8553170	13	134,82,53,189,98,87,136,88,120,80,90,116,474,	0,1576,4421,6339,11544,25067,27604,27850,29446,30303,30773,40132,40471,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	2145356	2156728	chr1:2145356-2156728	0	+	2145356	2145356	8553170	5	155,82,53,189,734,	0,670,3515,5433,10638,
#Partially deleted in new
chr1	2145386	2185116	chr1:2145386-2185116	0	+	2146035	2181861	789624	14	125,82,53,189,98,87,136,88,120,80,90,83,116,195,	0,640,3485,5403,10608,24131,26668,26914,28510,29367,29837,36445,39196,39535,
#Partially deleted in new
chr1	2168847	2185393	chr1:2168847-2185393	0	+	2168847	2168847	8553170	8	757,136,88,120,80,90,116,472,	0,3207,3453,5049,5906,6376,15735,16074,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	2181793	2183875	chr1:2181793-2183875	3	-	2181793	2181793	789624	2	948,305,	0,1777,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	2182734	2184389	chr1:2182734-2184389	1	-	2182734	2182734	8553170	3	89,134,399,	0,836,1256,
#Partially deleted in new
chr1	2184460	2194775	chr1:2184460-2194775	1	-	2185277	2194749	789624	3	1053,272,88,	0,9178,10227,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	2184463	2207733	chr1:2184463-2207733	0	-	2184463	2184463	8553170	8	1050,272,136,176,195,120,153,178,	0,9175,13543,16586,18972,21841,22051,23092,
#Partially deleted in new
chr1	2184477	2194775	chr1:2184477-2194775	0	-	2187157	2194749	0	7	1036,246,369,69,272,136,88,	0,1526,2360,5235,9161,9520,10210,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	2184477	2194741	chr1:2184477-2194741	0	-	2192857	2194741	789624	8	1036,246,369,69,131,272,136,54,	0,1526,2360,5235,8367,9161,9520,10210,
#Partially deleted in new
chr1	2185174	2194751	chr1:2185174-2194751	0	-	2185470	2194749	0	4	339,272,136,64,	0,8464,8823,9513,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	2189543	2194108	chr1:2189543-2194108	0	-	2189543	2189543	8553170	2	4367,111,	0,4454,
#Partially deleted in new
chr1	2189547	2194750	chr1:2189547-2194750	0	-	2189776	2194749	0	3	234,272,63,	0,4091,5140,
#Partially deleted in new
chr1	2189547	2194774	chr1:2189547-2194774	3	-	2189708	2194749	0	4	234,272,136,87,	0,4091,4450,5140,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	2189547	2199907	chr1:2189547-2199907	0	-	2189547	2189547	8553170	4	234,272,136,1901,	0,4091,4450,8459,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	2189547	2212720	chr1:2189547-2212720	0	-	2189547	2189547	8553170	8	234,272,136,136,2472,67,87,172,	0,4091,4450,8459,9206,14016,22824,23001,
#Partially deleted in new
chr1	2189568	2194213	chr1:2189568-2194213	0	-	2189568	2189568	8553170	3	213,272,216,	0,4070,4429,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	2189579	2194739	chr1:2189579-2194739	0	-	2192857	2194739	789624	4	202,329,272,52,	0,3067,4059,5108,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	2191900	2194748	chr1:2191900-2194748	0	-	2192857	2194748	789624	4	1075,272,136,61,	0,1738,2097,2787,
#Partially deleted in new
chr1	2198062	2203882	chr1:2198062-2203882	0	-	2198062	2198062	8553170	3	80,176,447,	0,2987,5373,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	2212170	2212574	chr1:2212170-2212574	0	-	2212170	2212170	8553170	2	288,26,	0,378,
#Partially deleted in new
chr1	2212522	2220738	chr1:2212522-2220738	3	+	2212522	2212522	8553170	2	122,204,	0,8012,
#Partially deleted in new
chr1	2228694	2310119	chr1:2228694-2310119	3	+	2228766	2306765	0	7	1041,126,116,263,293,231,3543,	0,74283,74590,75145,75598,77325,77882,
#Partially deleted in new
chr1	2232478	2303038	chr1:2232478-2303038	0	+	2232478	2232478	8553170	2	191,61,	0,70499,
#Partially deleted in new
chr1	2247995	2303376	chr1:2247995-2303376	0	+	2247995	2247995	8553170	3	76,126,92,	0,54982,55289,
#Deleted in new
chr1	2303645	2304368	chr1:2303645-2304368	0	+	2303645	2303645	8553170	2	463,76,	0,647,
#Partially deleted in new
chr1	2321252	2391707	chr1:2321252-2391707	3	-	2321382	2391533	789624	14	327,47,80,134,167,124,111,97,88,91,111,99,72,250,	0,2844,15216,15464,36179,37339,51228,53208,63725,64554,66166,66986,68672,70205,
#Deleted in new
chr1	2326200	2326693	chr1:2326200-2326693	3	-	2326200	2326200	8553170	1	493,	0,
#Partially deleted in new
chr1	2332125	2391687	chr1:2332125-2391687	0	-	2332125	2332125	8553170	12	628,80,134,167,124,111,97,88,91,111,99,230,	0,4343,4591,25306,26466,40355,42335,52852,53681,55293,56113,59332,
#Deleted in new
chr1	2350413	2352820	chr1:2350413-2352820	7	-	2350413	2350413	16724991	1	2407,	0,
#Deleted in new
chr1	2351643	2351857	chr1:2351643-2351857	5	-	2351643	2351643	16724991	1	214,	0,
#Partially deleted in new
chr1	2355174	2391707	chr1:2355174-2391707	1	-	2355447	2391533	789624	11	290,167,124,111,97,88,91,111,99,72,250,	0,2257,3417,17306,19286,29803,30632,32244,33064,34750,36283,
#Partially deleted in new
chr1	2358637	2375878	chr1:2358637-2375878	0	-	2358637	2358637	8553170	4	78,111,97,280,	0,13843,15823,16961,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	2363060	2363628	chr1:2363060-2363628	3	-	2363060	2363060	8553170	1	568,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	2371164	2387529	chr1:2371164-2387529	0	-	2371164	2371164	8553170	5	1427,97,181,91,111,	0,3296,13813,14642,16254,
#Partially deleted in new
chr1	2374852	2388337	chr1:2374852-2388337	0	-	2379058	2388337	789624	5	4375,88,91,111,99,	0,10125,10954,12566,13386,
#Partially deleted in new
chr1	2378054	2391671	chr1:2378054-2391671	0	-	2379221	2391533	789624	7	926,119,88,91,111,99,214,	0,1054,6923,7752,9364,10184,13403,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	2385371	2388509	chr1:2385371-2388509	0	-	2385371	2385371	8553170	1	3138,	0,
#Deleted in new
chr1	2387055	2388316	chr1:2387055-2388316	0	-	2387055	2387055	8553170	2	474,78,	0,1183,
#Partially deleted in new
chr1	2388003	2389996	chr1:2388003-2389996	0	-	2388227	2389996	789624	2	334,72,	0,1921,
#Partially deleted in new
chr1	2391774	2405442	chr1:2391774-2405442	1	+	2395790	2402295	789624	6	184,88,105,79,136,2408,	0,4009,5341,9082,10432,11260,
#Partially deleted in new
chr1	2391827	2402325	chr1:2391827-2402325	1	+	2395790	2402295	789624	5	131,88,105,79,119,	0,3956,5288,9029,10379,
#Partially deleted in new
chr1	2391832	2405444	chr1:2391832-2405444	3	+	2395790	2403124	789624	7	126,88,105,100,79,136,2410,	0,3951,5283,7582,9024,10374,11202,
#Partially deleted in new
chr1	2391842	2403064	chr1:2391842-2403064	0	+	2395790	2403064	789624	8	116,41,88,105,100,79,136,30,	0,3765,3941,5273,7572,9014,10364,11192,
#Partially deleted in new
chr1	2391856	2396367	chr1:2391856-2396367	0	+	2391856	2391856	8553170	2	102,584,	0,3927,
#Partially deleted in new
chr1	2391889	2403751	chr1:2391889-2403751	1	+	2395790	2402295	789624	7	69,88,105,100,79,246,717,	0,3894,5226,7525,8967,10207,11145,
#Partially deleted in new
chr1	2393173	2402316	chr1:2393173-2402316	0	+	2395790	2402316	789624	6	58,88,105,100,79,110,	0,2610,3942,6241,7683,9033,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	2394004	2403216	chr1:2394004-2403216	1	+	2395790	2403124	789624	6	1867,105,100,79,136,182,	0,3111,5410,6852,8202,9030,
#Deleted in new
chr1	2401950	2403227	chr1:2401950-2403227	0	+	2401950	2401950	8553170	2	392,193,	0,1084,
#Partially deleted in new
chr1	2403963	2412530	chr1:2403963-2412530	1	-	2405765	2412502	789624	6	1871,136,236,407,81,140,	0,2520,2756,4488,6407,8427,
#Partially deleted in new
chr1	2404060	2412456	chr1:2404060-2412456	0	-	2405765	2412456	8553170	8	311,279,804,136,176,407,81,66,	0,552,970,2423,2659,4391,6310,8330,
#Partially deleted in new
chr1	2404818	2412571	chr1:2404818-2412571	3	-	2405765	2412502	789624	6	1016,136,176,407,81,181,	0,1665,1901,3633,5552,7572,
#Partially deleted in new
chr1	2404837	2412540	chr1:2404837-2412540	1	-	2405765	2412502	789624	6	991,136,176,407,81,150,	0,1646,1882,3614,5533,7553,
#Partially deleted in new
chr1	2406517	2412535	chr1:2406517-2412535	0	-	2406861	2412502	789624	5	102,176,403,81,145,	0,202,1938,3853,5873,
#Partially deleted in new
chr1	2408529	2413797	chr1:2408529-2413797	0	-	2408529	2408619	789624	3	329,81,201,	0,1841,5067,
#Deleted in new
chr1	2408582	2410004	chr1:2408582-2410004	0	-	2408582	2408582	8553170	2	276,327,	0,1095,
#Deleted in new
chr1	2408603	2410836	chr1:2408603-2410836	0	-	2410758	2410836	789624	3	255,191,207,	0,1657,2026,
#Partially deleted in new
chr1	2408754	2412514	chr1:2408754-2412514	0	-	2410758	2412502	789624	4	104,81,239,124,	0,1616,1875,3636,
#Partially deleted in new
chr1	2425979	2479804	chr1:2425979-2479804	0	+	2430514	2479804	789624	4	58,292,147,71,	0,4358,52496,53754,
#Deleted in new
chr1	2467458	2505526	chr1:2467458-2505526	1	+	2467619	2503627	789624	22	204,147,245,129,171,94,204,121,172,108,144,93,83,98,183,108,125,85,147,80,799,1910,	0,11017,12275,12725,16989,19448,19714,20139,21748,22301,23733,27397,28029,29148,29369,30043,31064,31285,31625,32182,34653,36158,
#Deleted in new
chr1	2476314	2505525	chr1:2476314-2505525	3	+	2476588	2505213	789624	22	398,147,244,130,171,94,204,121,172,108,144,93,83,98,183,108,125,85,147,80,298,1604,	0,2161,3419,3868,8133,10592,10858,11283,12892,13445,14877,18541,19173,20292,20513,21187,22208,22429,22769,23326,25797,27607,
#Deleted in new
chr1	2476314	2505525	chr1:2476314-2505525	1	+	2476588	2505213	789624	22	398,147,245,129,171,94,204,121,172,108,144,93,83,98,183,108,125,85,147,80,298,1604,	0,2161,3419,3869,8133,10592,10858,11283,12892,13445,14877,18541,19173,20292,20513,21187,22208,22429,22769,23326,25797,27607,
#Deleted in new
chr1	2479089	2505530	chr1:2479089-2505530	0	+	2479089	2479089	8553170	19	889,129,171,94,204,121,172,108,144,93,83,98,183,108,125,85,147,80,3419,	0,1094,5358,7817,8083,8508,10117,10670,12102,15766,16398,17517,17738,18412,19433,19654,19994,20551,23022,
#Deleted in new
chr1	2479887	2505276	chr1:2479887-2505276	0	+	2479887	2505213	789624	19	91,129,171,94,204,121,172,108,144,93,83,98,183,125,85,147,80,298,1355,	0,296,4560,7019,7285,7710,9319,9872,11304,14968,15600,16719,16940,18635,18856,19196,19753,22224,24034,
#Deleted in new
chr1	2492299	2493258	chr1:2492299-2493258	3	-	2492299	2492299	8553170	2	297,158,	0,801,
#Deleted in new
chr1	2493436	2494479	chr1:2493436-2494479	3	-	2493436	2493436	8553170	2	417,97,	0,946,
#Deleted in new
chr1	2497781	2505528	chr1:2497781-2505528	0	+	2497781	2497781	8553170	4	866,85,147,5888,	0,962,1302,1859,
#Deleted in new
chr1	2498646	2505528	chr1:2498646-2505528	0	+	2498646	2498646	8553170	6	182,147,80,298,27,1607,	0,437,994,3465,4970,5275,
#Deleted in new
chr1	2508532	2526628	chr1:2508532-2526628	3	-	2508846	2526611	789624	19	528,69,101,105,50,56,152,88,113,156,101,82,182,154,93,184,215,83,165,	0,1329,1524,2145,2805,3095,4355,5469,5821,7029,9631,9983,10610,11268,11789,12190,12568,13185,17931,
#Deleted in new
chr1	2508536	2526596	chr1:2508536-2526596	0	-	2508846	2526596	789624	19	524,69,101,105,50,56,152,88,113,156,101,82,182,154,93,111,171,83,133,	0,1325,1520,2141,2801,3091,4351,5465,5817,7025,9627,9979,10606,11264,11785,12186,12608,13181,17927,
#Deleted in new
chr1	2508794	2520901	chr1:2508794-2520901	0	-	2510733	2520901	789624	16	266,69,101,71,50,56,152,88,113,156,101,82,182,154,93,179,	0,1067,1262,1883,2543,2833,4093,5207,5559,6767,9369,9721,10348,11006,11527,11928,
#Deleted in new
chr1	2509792	2514403	chr1:2509792-2514403	0	-	2510733	2514403	789624	8	138,101,71,50,56,152,88,50,	0,264,885,1545,1835,3095,4209,4561,
#Deleted in new
chr1	2510292	2513013	chr1:2510292-2513013	0	-	2510292	2510292	8553170	4	490,50,56,126,	0,1045,1335,2595,
#Deleted in new
chr1	2512405	2514085	chr1:2512405-2514085	0	-	2512405	2512405	8553170	2	634,84,	0,1596,
#Deleted in new
chr1	2514412	2515937	chr1:2514412-2515937	0	-	2514412	2514412	8553170	2	54,376,	0,1149,
#Deleted in new
chr1	2514432	2519295	chr1:2514432-2519295	0	-	2515320	2519295	789624	6	34,144,156,101,82,153,	0,825,1129,3731,4083,4710,
#Deleted in new
chr1	2519203	2526575	chr1:2519203-2526575	0	-	2521301	2526575	789624	6	121,154,93,184,215,112,	0,597,1118,1519,1897,7260,
#Deleted in new
chr1	2520839	2526596	chr1:2520839-2526596	0	-	2521609	2526596	789624	3	67,841,133,	0,261,5624,
#Deleted in new
chr1	2521260	2526187	chr1:2521260-2526187	0	-	2521260	2521260	8553170	3	55,83,587,	0,457,4340,
#Deleted in new
chr1	2521366	2526597	chr1:2521366-2526597	0	-	2521366	2521366	8553170	2	434,134,	0,5097,
#Deleted in new
chr1	2528744	2530245	chr1:2528744-2530245	3	-	2529468	2530164	789624	3	1005,166,135,	0,1101,1366,
#Partially deleted in new
chr1	2530063	2547460	chr1:2530063-2547460	3	+	2530063	2530063	8553170	2	39,1492,	0,15905,
#Deleted in new
chr1	2546399	2547460	chr1:2546399-2547460	0	+	2546399	2546399	8553170	1	1061,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	2549919	2557011	chr1:2549919-2557011	3	-	2549919	2549919	789624	6	200,929,189,196,1973,35,	0,1855,3706,4181,4804,7057,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	2549919	2554245	chr1:2549919-2554245	0	-	2549919	2549919	8553170	2	355,145,	0,4181,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	2549919	2552106	chr1:2549919-2552106	1	-	2549919	2549919	8553170	3	355,159,1115,	0,653,1072,
#Deleted in new
chr1	2550073	2551598	chr1:2550073-2551598	0	-	2550073	2550073	8553170	2	201,607,	0,918,
#Deleted in new
chr1	2550282	2554150	chr1:2550282-2554150	1	-	2550282	2550282	8553170	2	449,3159,	0,709,
#Deleted in new
chr1	2554240	2557031	chr1:2554240-2557031	1	-	2554240	2554240	8553170	4	56,189,269,55,	0,1440,2187,2736,
#Deleted in new
chr1	2555638	2560714	chr1:2555638-2560714	0	+	2556664	2560714	789624	6	29,149,109,126,156,91,	0,946,2087,2704,4184,4985,
#Deleted in new
chr1	2555790	2561815	chr1:2555790-2561815	0	+	2556664	2561815	789624	7	60,149,109,126,156,91,143,	0,794,1935,2552,4032,4833,5882,
#Deleted in new
chr1	2555801	2561815	chr1:2555801-2561815	0	+	2556664	2561815	789624	7	451,149,109,126,156,91,143,	0,783,1924,2541,4021,4822,5871,
#Deleted in new
chr1	2555979	2561815	chr1:2555979-2561815	0	+	2556664	2561815	789624	7	53,149,109,126,156,91,143,	0,605,1746,2363,3843,4644,5693,
#Deleted in new
chr1	2556221	2561718	chr1:2556221-2561718	1	+	2556664	2561524	789624	7	40,149,109,126,156,91,225,	0,363,1504,2121,3601,4402,5272,
#Deleted in new
chr1	2556365	2563829	chr1:2556365-2563829	3	+	2556664	2563273	0	8	368,109,126,156,91,143,32,682,	0,1360,1977,3457,4258,5307,6499,6782,
#Deleted in new
chr1	2556385	2563829	chr1:2556385-2563829	0	+	2556385	2556385	8553170	6	70,627,91,143,32,682,	0,2966,4238,5287,6479,6762,
#Deleted in new
chr1	2556404	2559156	chr1:2556404-2559156	0	+	2556404	2556404	8553170	4	329,109,126,276,	0,1321,1938,2476,
#Deleted in new
chr1	2556405	2558862	chr1:2556405-2558862	0	+	2556405	2556405	8553170	3	328,109,520,	0,1320,1937,
#Deleted in new
chr1	2556556	2561535	chr1:2556556-2561535	0	+	2556556	2556556	8553170	5	177,109,126,156,912,	0,1169,1786,3266,4067,
#Deleted in new
chr1	2556570	2563749	chr1:2556570-2563749	0	+	2556570	2556570	8553170	5	163,109,1636,91,2256,	0,1155,1772,4053,4923,
#Deleted in new
chr1	2557812	2563826	chr1:2557812-2563826	0	+	2557812	2557812	8553170	6	22,1636,91,143,32,679,	0,530,2811,3860,5052,5335,
#Deleted in new
chr1	2559579	2561542	chr1:2559579-2561542	0	+	2559579	2559579	8553170	3	399,91,49,	0,1044,1914,
#Deleted in new
chr1	2560553	2563504	chr1:2560553-2563504	0	+	2560553	2560553	8553170	4	161,322,32,357,	0,940,2311,2594,
#Deleted in new
chr1	2560681	2565382	chr1:2560681-2565382	0	+	2560681	2562868	789624	4	33,39,32,330,	0,1095,2183,4371,
#Deleted in new
chr1	2561800	2563452	chr1:2561800-2563452	0	+	2561800	2561800	8553170	3	157,32,305,	0,1064,1347,
#Partially deleted in new
chr1	2566409	2569888	chr1:2566409-2569888	3	+	2566409	2566409	8553170	3	196,189,912,	0,1456,2567,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	2581559	2584533	chr1:2581559-2584533	3	+	2581559	2581559	789624	3	91,126,409,	0,1810,2565,
#Deleted in new
chr1	2586490	2589632	chr1:2586490-2589632	0	+	2586490	2586490	789624	7	101,205,52,64,76,119,223,	0,600,1250,1899,2059,2431,2919,
#Deleted in new
chr1	2586539	2589658	chr1:2586539-2589658	0	+	2586539	2586539	8553170	7	52,205,52,64,76,87,249,	0,551,1201,1850,2010,2414,2870,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	2586749	2591467	chr1:2586749-2591467	1	+	2586795	2589427	789624	6	199,205,52,64,87,2058,	0,341,991,1640,2204,2660,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	2586749	2591467	chr1:2586749-2591467	1	+	2586795	2589427	789624	7	199,205,52,118,76,119,2058,	0,341,991,1586,1800,2172,2660,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	2586774	2591468	chr1:2586774-2591468	3	+	2586885	2589427	789624	7	174,205,52,64,76,119,2059,	0,316,966,1615,1775,2147,2635,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	2586779	2591467	chr1:2586779-2591467	1	+	2586885	2589414	789624	7	169,205,52,118,76,87,2058,	0,311,961,1556,1770,2174,2630,
#Deleted in new
chr1	2586795	2589947	chr1:2586795-2589947	1	+	2586885	2589427	789624	6	153,205,52,64,84,538,	0,295,945,1594,2161,2614,
#Deleted in new
chr1	2586795	2589427	chr1:2586795-2589427	1	+	2586795	2589427	8553170	7	153,205,52,64,76,119,18,	0,295,945,1594,1754,2126,2614,
#Deleted in new
chr1	2586795	2589427	chr1:2586795-2589427	1	+	2586795	2589427	8553170	6	153,205,52,64,84,18,	0,295,945,1594,2161,2614,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	2586797	2591463	chr1:2586797-2591463	1	+	2586885	2589414	789624	7	151,205,52,64,76,87,2054,	0,293,943,1592,1752,2156,2612,
#Deleted in new
chr1	2586816	2589805	chr1:2586816-2589805	0	+	2586816	2586816	8553170	7	57,182,52,64,76,119,396,	0,297,924,1573,1733,2105,2593,
#Deleted in new
chr1	2586832	2588977	chr1:2586832-2588977	0	+	2586885	2588977	789624	6	116,205,52,64,96,56,	0,258,908,1557,1697,2089,
#Deleted in new
chr1	2586876	2588992	chr1:2586876-2588992	0	+	2586885	2588992	789624	5	72,205,52,64,71,	0,214,864,1513,2045,
#Deleted in new
chr1	2587041	2589513	chr1:2587041-2589513	0	+	2587041	2587041	8553170	6	254,52,64,96,119,104,	0,699,1348,1488,1880,2368,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	2587077	2591469	chr1:2587077-2591469	0	+	2587077	2587077	789624	6	218,52,64,96,87,2060,	0,663,1312,1452,1876,2332,
#Deleted in new
chr1	2587084	2588745	chr1:2587084-2588745	0	+	2587084	2587084	8553170	3	211,52,356,	0,656,1305,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	2588593	2591468	chr1:2588593-2591468	0	+	2588593	2588593	8553170	2	447,2059,	0,816,
#Partially deleted in new
chr1	2590638	2592678	chr1:2590638-2592678	0	-	2590989	2592678	789624	3	451,77,24,	0,918,2016,
#Partially deleted in new
chr1	2590642	2632990	chr1:2590642-2632990	3	-	2590989	2629484	789624	24	447,77,96,66,134,120,59,104,84,99,129,94,137,90,135,66,119,96,81,162,60,78,191,125,	0,914,1289,2012,2190,3171,3742,4147,4633,5366,5918,7564,8011,13241,13504,14915,15605,16331,18696,19027,20638,21484,38688,42223,
#Partially deleted in new
chr1	2590925	2629494	chr1:2590925-2629494	1	-	2590989	2629484	789624	19	164,77,96,66,134,120,59,104,84,99,129,94,137,90,26,162,60,78,164,	0,631,1006,1729,1907,2888,3459,3864,4350,5083,5635,7281,7728,12958,18468,18744,20355,21201,38405,
#Partially deleted in new
chr1	2590925	2629494	chr1:2590925-2629494	0	-	2593873	2629484	789624	23	164,77,96,66,134,149,59,104,84,99,129,94,137,90,135,66,119,96,81,162,60,78,164,	0,631,1006,1729,1907,2888,3459,3864,4350,5083,5635,7281,7728,12958,13221,14632,15322,16048,18413,18744,20355,21201,38405,
#Deleted in new
chr1	2591693	2592879	chr1:2591693-2592879	0	-	2591693	2591693	8553170	2	334,225,	0,961,
#Deleted in new
chr1	2591693	2592868	chr1:2591693-2592868	0	-	2591693	2591693	8553170	2	334,148,	0,1027,
#Deleted in new
chr1	2592654	2594073	chr1:2592654-2594073	0	-	2592654	2592654	8553170	3	66,134,260,	0,178,1159,
#Partially deleted in new
chr1	2606280	2611401	chr1:2606280-2611401	0	-	2606280	2606280	8553170	5	86,96,81,162,121,	0,693,3058,3389,5000,
#Deleted in new
chr1	2629757	2632979	chr1:2629757-2632979	0	-	2629757	2629757	8553170	2	440,114,	0,3108,
#Partially deleted in new
chr1	2632567	2636620	chr1:2632567-2636620	3	+	2632567	2632567	8553170	2	108,265,	0,3788,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	2635975	2801717	chr1:2635975-2801717	1	-	2641367	2800827	789624	9	5920,215,271,167,205,226,844,825,141,	0,8288,9317,147633,149843,151505,153527,164068,165601,
#Partially deleted in new
chr1	2641367	2789665	chr1:2641367-2789665	3	-	2641367	2789591	789624	7	528,215,271,167,205,226,163,	0,2896,3925,142241,144451,146113,148135,
#Deleted in new
chr1	2773602	2776473	chr1:2773602-2776473	3	+	2773602	2773602	8553170	10	262,120,480,121,80,120,81,116,81,104,	0,344,627,1187,1390,1552,1754,1916,2446,2767,
#Partially deleted in new
chr1	2811849	2812692	chr1:2811849-2812692	3	-	2811849	2811849	8553170	2	149,458,	0,385,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	2814431	2814998	chr1:2814431-2814998	3	-	2814431	2814431	8553170	2	257,172,	0,395,
#Partially deleted in new
chr1	2960657	2963415	chr1:2960657-2963415	3	-	2960657	2960657	8553170	3	928,429,152,	0,1014,2606,
#Partially deleted in new
chr1	2961017	2968707	chr1:2961017-2968707	0	-	2961017	2961017	8553170	3	568,429,145,	0,654,7545,
#Deleted in new
chr1	3021482	3022903	chr1:3021482-3022903	3	+	3021686	3022820	789624	1	1421,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	3059614	3063786	chr1:3059614-3063786	0	-	3059614	3059614	8553170	6	123,54,104,225,223,1497,	0,615,886,1492,1976,2675,
#Deleted in new
chr1	3059614	3062531	chr1:3059614-3062531	0	-	3059614	3059614	8553170	1	2917,	0,
#Deleted in new
chr1	3059616	3061751	chr1:3059616-3061751	0	-	3059616	3059616	8553170	4	121,54,225,161,	0,613,1490,1974,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	3059616	3068437	chr1:3059616-3068437	0	-	3059616	3059616	789624	7	121,54,104,2949,91,712,216,	0,613,884,1490,4595,7720,8605,
#Deleted in new
chr1	3059616	3062032	chr1:3059616-3062032	0	-	3059616	3059616	8553170	3	667,104,926,	0,884,1490,
#Partially deleted in new
chr1	3061288	3063682	chr1:3061288-3063682	0	-	3061288	3061288	8553170	2	43,237,	0,2157,
#Deleted in new
chr1	3061958	3062395	chr1:3061958-3062395	7	-	3061958	3061958	16724991	2	234,201,	0,236,
#Deleted in new
chr1	3064071	3067769	chr1:3064071-3067769	0	-	3064071	3064071	789624	2	231,433,	0,3265,
#Partially deleted in new
chr1	3069167	3434342	chr1:3069167-3434342	1	+	3069259	3433689	789624	16	129,350,51,138,103,208,148,154,1417,88,170,78,170,175,237,666,	0,116957,174919,315981,327323,333623,335571,336327,342216,345392,348660,349499,356413,356883,361704,364509,
#Partially deleted in new
chr1	3069182	3186591	chr1:3069182-3186591	0	+	3069182	3069182	8553170	2	114,467,	0,116942,
#Partially deleted in new
chr1	3069196	3435421	chr1:3069196-3435421	1	+	3069259	3433811	0	17	100,350,51,135,103,208,148,154,1417,88,170,78,170,175,237,175,1688,	0,116928,174890,315955,327294,333594,335542,336298,342187,345363,348631,349470,356384,356854,361675,362769,364537,
#Partially deleted in new
chr1	3069210	3438621	chr1:3069210-3438621	3	+	3069259	3433811	0	17	86,350,51,135,103,208,148,154,1417,88,170,78,170,175,237,175,4945,	0,116914,174876,315941,327280,333580,335528,336284,342173,345349,348617,349456,356370,356840,361661,362755,364466,
#Partially deleted in new
chr1	3069210	3434342	chr1:3069210-3434342	1	+	3069259	3433689	789624	16	86,350,51,138,103,208,148,154,1417,85,170,78,170,175,237,666,	0,116914,174876,315938,327280,333580,335528,336284,342173,345352,348617,349456,356370,356840,361661,364466,
#Deleted in new
chr1	3127974	3128035	chr1:3127974-3128035	3	+	3127974	3127974	5263520	1	61,	0,
#Deleted in new
chr1	3132926	3133709	chr1:3132926-3133709	3	-	3132926	3132926	8553170	2	332,137,	0,646,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	3205987	3208664	chr1:3205987-3208664	3	+	3205987	3205987	8553170	1	2677,	0,
#Partially deleted in new
chr1	3237930	3433925	chr1:3237930-3433925	0	+	3237930	3237930	8553170	16	165,51,135,103,208,148,154,1417,88,170,78,170,175,237,175,249,	0,6156,147221,158560,164860,166808,167564,173453,176629,179897,180736,187650,188120,192941,194035,195746,
#Partially deleted in new
chr1	3244131	3386918	chr1:3244131-3386918	0	+	3244131	3386696	789624	3	6,135,243,	0,141020,142544,
#Deleted in new
chr1	3306635	3310096	chr1:3306635-3310096	3	-	3306635	3306635	8553170	1	3461,	0,
#Partially deleted in new
chr1	3396490	3434293	chr1:3396490-3434293	0	+	3396490	3433811	789624	13	103,208,148,154,1417,85,170,78,170,175,237,175,617,	0,6300,8248,9004,14893,18072,21337,22176,29090,29560,34381,35475,37186,
#Partially deleted in new
chr1	3424918	3434095	chr1:3424918-3434095	0	+	3424918	3424918	8553170	5	141,170,175,237,419,	0,662,1132,5953,8758,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	3425215	3426072	chr1:3425215-3426072	0	+	3425215	3425215	8553170	2	535,22,	0,835,
#Partially deleted in new
chr1	3454425	3481113	chr1:3454425-3481113	3	+	3463084	3480587	0	15	386,607,46,170,57,161,153,130,75,93,152,189,74,102,666,	0,8640,11722,12742,14454,15007,18652,18967,20282,21544,23449,23998,25091,25386,26022,
#Deleted in new
chr1	3466004	3481113	chr1:3466004-3481113	1	+	3469435	3480587	0	13	189,170,57,161,153,130,75,93,152,189,74,102,666,	0,1163,2875,3428,7073,7388,8703,9965,11870,12419,13512,13807,14443,
#Deleted in new
chr1	3466970	3481113	chr1:3466970-3481113	1	+	3469435	3480587	0	12	367,57,161,153,130,75,93,152,189,74,102,666,	0,1909,2462,6107,6422,7737,8999,10904,11453,12546,12841,13477,
#Deleted in new
chr1	3468543	3473521	chr1:3468543-3473521	0	+	3469435	3473521	789624	4	393,161,153,129,	0,889,4534,4849,
#Deleted in new
chr1	3471606	3474457	chr1:3471606-3474457	0	+	3471606	3471606	8553170	3	185,153,1065,	0,1471,1786,
#Deleted in new
chr1	3471623	3476019	chr1:3471623-3476019	0	+	3471657	3476019	789624	5	168,153,130,75,50,	0,1454,1769,3084,4346,
#Deleted in new
chr1	3472768	3481113	chr1:3472768-3481113	0	+	3472768	3472768	8553170	8	462,130,75,93,738,74,102,666,	0,624,1939,3201,5106,6748,7043,7679,
#Deleted in new
chr1	3487245	3487627	chr1:3487245-3487627	3	+	3487245	3487245	8553170	1	382,	0,
#Partially deleted in new
chr1	3489919	3531448	chr1:3489919-3531448	1	-	3490527	3531245	789624	30	670,48,129,27,129,129,129,129,129,129,129,129,132,129,132,126,135,135,129,129,132,171,123,120,138,123,123,126,123,369,	0,992,2719,3851,4451,4693,5970,6735,7313,8451,9668,9876,10713,11046,11257,11876,15288,15502,16188,17875,18638,19155,19950,20863,21630,22086,24630,25482,34204,41160,
#Partially deleted in new
chr1	3489925	3611495	chr1:3489925-3611495	3	-	3490527	3611268	789624	37	664,48,129,129,129,129,129,129,129,132,129,129,129,129,129,129,132,129,132,126,135,135,129,129,132,171,123,120,138,123,123,126,123,105,110,135,358,	0,986,2713,3845,4070,4445,4687,5964,6729,7062,7307,8445,8772,9212,9662,9870,10707,11040,11251,11870,15282,15496,16182,17869,18632,19149,19944,20857,21624,22080,24624,25476,34198,89899,105412,112540,121212,
#Deleted in new
chr1	3490311	3493486	chr1:3490311-3493486	0	-	3490311	3490311	8553170	3	278,48,848,	0,600,2327,
#Partially deleted in new
chr1	3490561	3611277	chr1:3490561-3611277	0	-	3495940	3611268	789624	37	28,129,129,129,129,129,129,129,132,129,131,129,129,129,129,129,132,129,132,126,135,135,129,129,132,171,123,120,138,123,123,126,123,126,110,135,140,	0,2077,3209,3434,3809,4051,5328,6093,6426,6671,6929,7809,8136,8576,9026,9234,10071,10404,10615,11234,14646,14860,15546,17233,17996,18513,19308,20221,20988,21444,23988,24840,33562,56436,104776,111904,120576,
#Deleted in new
chr1	3490924	3496717	chr1:3490924-3496717	0	-	3490924	3496717	789624	7	35,129,129,129,129,129,63,	0,1714,3071,3446,3688,4965,5730,
#Deleted in new
chr1	3492638	3496014	chr1:3492638-3496014	0	-	3492638	3492638	8553170	5	129,129,129,371,125,	0,1132,1357,1732,3251,
#Deleted in new
chr1	3492727	3494244	chr1:3492727-3494244	0	-	3492727	3492727	8553170	3	40,129,249,	0,1043,1268,
#Deleted in new
chr1	3560694	3560790	chr1:3560694-3560790	3	-	3560694	3560694	5263520	1	96,	0,
#Deleted in new
chr1	3623189	3624743	chr1:3623189-3624743	3	-	3623189	3623189	8553170	3	367,143,112,	0,1118,1442,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	3625001	3630127	chr1:3625001-3630127	3	+	3625072	3628603	789624	5	272,92,177,154,1719,	0,422,711,2498,3407,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	3625049	3630127	chr1:3625049-3630127	1	+	3625072	3628603	789624	4	224,92,154,1719,	0,374,2450,3359,
#Partially deleted in new
chr1	3630766	3650073	chr1:3630766-3650073	3	-	3630974	3649999	789624	12	351,192,126,106,78,135,87,104,73,117,153,143,	0,699,1446,2631,4230,4393,5177,6228,7983,15899,16641,19164,
#Partially deleted in new
chr1	3630766	3650058	chr1:3630766-3650058	1	-	3631397	3649999	789624	11	891,126,106,78,135,87,104,73,117,153,128,	0,1446,2631,4230,4393,5177,6228,7983,15899,16641,19164,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	3631885	3639625	chr1:3631885-3639625	0	-	3631885	3631885	8553170	2	5213,876,	0,6864,
#Partially deleted in new
chr1	3632212	3650026	chr1:3632212-3650026	0	-	3632212	3649999	789624	9	126,106,78,87,104,73,117,153,96,	0,1185,2784,3731,4782,6537,14453,15195,17718,
#Partially deleted in new
chr1	3632765	3637057	chr1:3632765-3637057	0	-	3632765	3632765	8553170	5	738,78,135,87,63,	0,2231,2394,3178,4229,
#Deleted in new
chr1	3633309	3635450	chr1:3633309-3635450	0	-	3633309	3633309	8553170	3	194,78,291,	0,1687,1850,
#Deleted in new
chr1	3634915	3635433	chr1:3634915-3635433	0	-	3634915	3634915	8553170	2	159,274,	0,244,
#Partially deleted in new
chr1	3635013	3652761	chr1:3635013-3652761	0	-	3635013	3647431	789624	8	61,135,87,104,73,117,153,49,	0,146,930,1981,3736,11652,12394,17699,
#Partially deleted in new
chr1	3635271	3650063	chr1:3635271-3650063	0	-	3635271	3649999	789624	6	23,104,73,117,153,133,	0,1723,3478,11394,12136,14659,
#Deleted in new
chr1	3647245	3650061	chr1:3647245-3650061	0	-	3647245	3647245	8553170	2	315,131,	0,2685,
#Partially deleted in new
chr1	3652519	3736201	chr1:3652519-3736201	3	+	3682365	3733079	0	14	122,98,121,243,187,116,110,143,89,122,149,139,94,3455,	0,29813,30540,55029,69501,70834,74595,75108,75609,76807,77480,78407,78943,80227,
#Partially deleted in new
chr1	3652519	3736201	chr1:3652519-3736201	1	+	3682365	3732762	0	11	122,98,121,243,187,116,110,143,89,122,3455,	0,29813,30540,55029,69501,70834,74595,75108,75609,76807,80227,
#Partially deleted in new
chr1	3652564	3736200	chr1:3652564-3736200	1	+	3682365	3733079	0	12	77,98,121,243,187,116,110,143,89,122,94,3454,	0,29768,30495,54984,69456,70789,74550,75063,75564,76762,78898,80182,
#Partially deleted in new
chr1	3652564	3733292	chr1:3652564-3733292	1	+	3682365	3732762	0	13	77,98,121,243,187,116,110,143,89,122,149,139,546,	0,29768,30495,54984,69456,70789,74550,75063,75564,76762,77435,78362,80182,
#Partially deleted in new
chr1	3652564	3736200	chr1:3652564-3736200	1	+	3682365	3733079	0	12	77,98,121,243,187,116,110,143,89,122,139,3454,	0,29768,30495,54984,69456,70789,74550,75063,75564,76762,78362,80182,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	3658937	3668772	chr1:3658937-3668772	3	-	3658937	3658937	8553170	3	493,113,148,	0,3215,9687,
#Partially deleted in new
chr1	3682365	3733079	chr1:3682365-3733079	1	+	3682365	3733079	0	11	65,121,243,187,116,110,143,89,122,139,333,	0,694,25183,39655,40988,44749,45262,45763,46961,48561,50381,
#Partially deleted in new
chr1	3682365	3733079	chr1:3682365-3733079	1	+	3682365	3733079	0	11	65,121,243,187,116,110,143,89,122,94,333,	0,694,25183,39655,40988,44749,45262,45763,46961,49097,50381,
#Partially deleted in new
chr1	3690671	3733292	chr1:3690671-3733292	1	+	3690905	3731555	789624	11	273,243,187,116,110,143,89,122,139,94,546,	0,16877,31349,32682,36443,36956,37457,38655,40255,40791,42075,
#Partially deleted in new
chr1	3690671	3733292	chr1:3690671-3733292	1	+	3690905	3732762	0	11	273,243,187,116,110,143,89,122,149,139,546,	0,16877,31349,32682,36443,36956,37457,38655,39328,40255,42075,
#Partially deleted in new
chr1	3690671	3736201	chr1:3690671-3736201	1	+	3690905	3733079	0	12	273,243,187,116,110,143,89,122,149,139,94,3455,	0,16877,31349,32682,36443,36956,37457,38655,39328,40255,40791,42075,
#Partially deleted in new
chr1	3690706	3729751	chr1:3690706-3729751	0	+	3690706	3690706	8553170	8	238,243,187,116,110,143,89,425,	0,16842,31314,32647,36408,36921,37422,38620,
#Partially deleted in new
chr1	3698045	3708534	chr1:3698045-3708534	0	+	3698045	3698045	8553170	2	106,986,	0,9503,
#Partially deleted in new
chr1	3698057	3733091	chr1:3698057-3733091	1	+	3707575	3733079	0	12	94,243,187,116,110,143,89,122,149,139,94,345,	0,9491,23963,25296,29057,29570,30071,31269,31942,32869,33405,34689,
#Partially deleted in new
chr1	3712199	3714298	chr1:3712199-3714298	3	-	3712199	3712199	8553170	2	239,112,	0,1987,
#Partially deleted in new
chr1	3727477	3733367	chr1:3727477-3733367	0	+	3727477	3727477	8553170	6	293,89,122,139,94,621,	0,651,1849,3449,3985,5269,
#Partially deleted in new
chr1	3735510	3745905	chr1:3735510-3745905	7	-	3735510	3735510	16724991	7	32,178,291,155,108,130,299,	0,1415,2712,4722,7293,7550,10096,
#Deleted in new
chr1	3735600	3736588	chr1:3735600-3736588	4	-	3735600	3735600	16724991	1	988,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	3735610	3746771	chr1:3735610-3746771	4	-	3735610	3735610	16724991	6	2244,155,108,130,575,485,	0,4622,7193,7450,9996,10676,
#Partially deleted in new
chr1	3735649	3746942	chr1:3735649-3746942	4	-	3735649	3735649	16724991	6	909,178,155,108,130,1336,	0,1276,4583,7154,7411,9957,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	3735685	3746714	chr1:3735685-3746714	4	-	3735685	3735685	16724991	5	2169,155,157,130,1108,	0,4547,7118,7375,9921,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	3735983	3747322	chr1:3735983-3747322	4	-	3735983	3735983	16724991	4	4404,108,130,1716,	0,6820,7077,9623,
#Partially deleted in new
chr1	3736056	3746715	chr1:3736056-3746715	4	-	3736056	3736056	16724991	6	502,178,155,108,130,1335,	0,869,4176,6747,7004,9324,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	3736192	3747336	chr1:3736192-3747336	4	-	3736192	3736192	16724991	5	1662,155,154,130,1730,	0,4040,6611,6868,9414,
#Deleted in new
chr1	3736407	3737296	chr1:3736407-3737296	4	-	3736407	3736407	16724991	2	351,371,	0,518,
#Deleted in new
chr1	3736942	3737103	chr1:3736942-3737103	3	+	3736942	3736942	8553170	1	161,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	3737142	3746884	chr1:3737142-3746884	4	-	3737142	3737142	16724991	5	1371,155,154,130,1278,	0,3090,5661,5918,8464,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	3737148	3747373	chr1:3737148-3747373	5	-	3737148	3737148	16724991	5	1365,155,108,130,1767,	0,3084,5655,5912,8458,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	3737165	3746898	chr1:3737165-3746898	4	-	3737165	3737165	16724991	6	2242,692,88,157,130,1292,	0,2530,5264,5638,5895,8441,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	3737192	3746791	chr1:3737192-3746791	4	-	3737192	3737192	16724991	5	2143,552,154,130,1185,	0,2643,5611,5868,8414,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	3737205	3746147	chr1:3737205-3746147	4	-	3737205	3737205	16724991	6	649,291,155,108,130,541,	0,1017,3027,5598,5855,8401,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	3737211	3746725	chr1:3737211-3746725	4	-	3737211	3737211	16724991	6	1302,155,108,130,580,289,	0,3021,5592,5849,8395,9225,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	3737211	3746877	chr1:3737211-3746877	4	-	3737211	3737211	16724991	5	643,155,108,130,1271,	0,3021,5592,5849,8395,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	3737337	3746971	chr1:3737337-3746971	4	-	3737337	3737337	16724991	6	517,155,88,108,130,1365,	0,2895,5092,5466,5723,8269,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	3737528	3746383	chr1:3737528-3746383	4	-	3737528	3737528	16724991	6	326,1005,764,108,130,777,	0,694,2095,5275,5532,8078,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	3737538	3746791	chr1:3737538-3746791	4	-	3737538	3737538	16724991	5	2013,264,180,130,1185,	0,2585,5265,5522,8068,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	3737593	3747023	chr1:3737593-3747023	4	-	3737593	3737593	16724991	6	920,155,157,130,580,587,	0,2639,5210,5467,8013,8843,
#Partially deleted in new
chr1	3738074	3742858	chr1:3738074-3742858	4	-	3738074	3738074	16724991	4	439,155,88,55,	0,2158,4355,4729,
#Partially deleted in new
chr1	3738433	3746742	chr1:3738433-3746742	5	-	3738433	3738433	16724991	8	80,158,113,108,130,71,580,215,	0,625,1841,4370,4627,4867,7173,8094,
#Partially deleted in new
chr1	3738446	3743370	chr1:3738446-3743370	4	-	3738446	3738446	16724991	5	67,155,154,130,91,	0,1786,4357,4614,4833,
#Partially deleted in new
chr1	3739457	3746956	chr1:3739457-3746956	4	-	3739457	3739457	16724991	5	930,88,154,130,1350,	0,2972,3346,3603,6149,
#Partially deleted in new
chr1	3739704	3746907	chr1:3739704-3746907	4	-	3739704	3739704	16724991	4	683,154,130,1527,	0,3099,3356,5676,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	3739847	3743187	chr1:3739847-3743187	4	-	3739847	3739847	16724991	2	3110,127,	0,3213,
#Partially deleted in new
chr1	3739988	3746887	chr1:3739988-3746887	4	-	3739988	3739988	16724991	4	399,157,130,1281,	0,2815,3072,5618,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	3740136	3743261	chr1:3740136-3743261	4	-	3740136	3740136	16724991	4	251,154,108,201,	0,1083,2667,2924,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	3746459	3757189	chr1:3746459-3757189	0	+	3746459	3746459	8553170	6	232,145,126,325,124,1733,	0,1354,4872,6015,7658,8997,
#Partially deleted in new
chr1	3752397	3771644	chr1:3752397-3771644	3	+	3752481	3771523	789624	12	402,124,111,158,150,93,367,131,78,213,105,244,	0,1720,3059,4335,8883,10222,10710,11308,14137,14835,17385,19003,
#Partially deleted in new
chr1	3752444	3771645	chr1:3752444-3771645	0	+	3752481	3756807	789624	12	355,124,111,139,150,93,508,131,78,213,105,245,	0,1673,3012,4307,8836,10175,10522,11261,14090,14788,17338,18956,
#Deleted in new
chr1	3772760	3775908	chr1:3772760-3775908	0	+	3775373	3775908	789624	4	28,119,185,114,	0,302,2538,3034,
#Deleted in new
chr1	3772770	3775670	chr1:3772770-3775670	1	+	3775373	3775487	789624	3	18,119,372,	0,292,2528,
#Deleted in new
chr1	3772786	3775982	chr1:3772786-3775982	3	+	3775373	3775921	789624	4	55,119,185,188,	0,276,2512,3008,
#Deleted in new
chr1	3772824	3775388	chr1:3772824-3775388	0	+	3775373	3775388	8553170	2	357,90,	0,2474,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	3778557	3796504	chr1:3778557-3796504	3	-	3781087	3796476	789624	7	2779,90,103,116,117,462,643,	0,2954,4103,5438,6529,8291,17304,
#Partially deleted in new
chr1	3781134	3784175	chr1:3781134-3784175	0	-	3781134	3781134	8553170	4	202,90,103,180,	0,377,1526,2861,
#Partially deleted in new
chr1	3781289	3784047	chr1:3781289-3784047	0	-	3783811	3784047	789624	5	47,90,103,142,52,	0,222,1371,2480,2706,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	3782814	3783111	chr1:3782814-3783111	3	+	3782814	3782814	8553170	1	297,	0,
#Deleted in new
chr1	3785007	3785538	chr1:3785007-3785538	3	+	3785007	3785007	8553170	1	531,	0,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr1	3812080	3857199	chr1:3812080-3857199	3	-	3815401	3852407	0	22	3437,91,68,139,109,67,37,108,207,177,174,168,198,228,156,169,77,63,139,174,127,311,	0,4199,11093,11343,13677,14289,14627,17185,17710,18965,21781,22844,24414,25211,26883,27527,32826,33208,35394,36527,40214,44808,
#Partially deleted in new
chr1	3815238	3816458	chr1:3815238-3816458	0	-	3815238	3815238	8553170	2	279,179,	0,1041,
#Partially deleted in new
chr1	3816148	3829306	chr1:3816148-3829306	0	-	3816259	3829306	789624	7	222,68,139,109,67,37,41,	0,7025,7275,9609,10221,10559,13117,
#Partially deleted in new
chr1	3822775	3829373	chr1:3822775-3829373	0	-	3823143	3829373	789624	6	466,139,109,67,37,108,	0,648,2982,3594,3932,6490,
#Partially deleted in new
chr1	3829691	3831224	chr1:3829691-3831224	0	-	3829691	3829691	8553170	2	306,179,	0,1354,
#Partially deleted in new
chr1	3831090	3837136	chr1:3831090-3837136	0	-	3831090	3831090	8553170	4	132,174,168,222,	0,2771,3834,5824,
#Partially deleted in new
chr1	3833670	3857198	chr1:3833670-3857198	0	-	3833670	3833670	8553170	12	365,168,198,228,156,169,77,63,139,174,127,310,	0,1254,2824,3621,5293,5937,11236,11618,13804,14937,18624,23218,
#Partially deleted in new
chr1	3835061	3839110	chr1:3835061-3839110	0	-	3835061	3839110	789624	4	31,198,54,147,	0,1433,2230,3902,
#Partially deleted in new
chr1	3839082	3857194	chr1:3839082-3857194	0	-	3839082	3852407	789624	7	37,169,77,63,139,127,306,	0,525,5824,6206,8392,13212,17806,
#Partially deleted in new
chr1	3839756	3847704	chr1:3839756-3847704	0	-	3839756	3839756	8553170	4	20,77,63,230,	0,5150,5532,7718,
#Partially deleted in new
chr1	3843108	3857214	chr1:3843108-3857214	1	-	3843154	3852407	0	7	215,77,63,139,174,127,326,	0,1798,2180,4366,5499,9186,13780,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	3857266	3885420	chr1:3857266-3885420	1	+	3857603	3883741	789624	7	451,149,239,80,171,101,1914,	0,1451,8495,10707,12338,15205,26240,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	3857280	3885429	chr1:3857280-3885429	3	+	3857603	3883741	0	7	437,127,189,80,171,101,1923,	0,1437,8531,10693,12324,15191,26226,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	3857280	3885429	chr1:3857280-3885429	0	+	3857603	3873044	0	8	437,127,189,80,171,101,124,1923,	0,1437,8531,10693,12324,15191,15733,26226,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	3857459	3885429	chr1:3857459-3885429	0	+	3857603	3865896	789624	8	258,149,189,115,80,171,101,1923,	0,1258,8352,8824,10514,12145,15012,26047,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	3857472	3885429	chr1:3857472-3885429	0	+	3857603	3865752	0	7	245,127,358,80,171,101,1923,	0,1245,8170,10501,12132,14999,26034,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	3857472	3885429	chr1:3857472-3885429	0	+	3857603	3860490	789624	8	245,127,87,189,80,171,101,1923,	0,1245,2947,8339,10501,12132,14999,26034,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	3857516	3885429	chr1:3857516-3885429	0	+	3857603	3865763	789624	7	201,127,239,80,171,101,1923,	0,1201,8245,10457,12088,14955,25990,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	3857599	3885429	chr1:3857599-3885429	0	+	3857603	3865896	789624	7	118,149,189,80,171,101,1923,	0,1118,8212,10374,12005,14872,25907,
#Partially deleted in new
chr1	3857603	3883741	chr1:3857603-3883741	1	+	3857603	3872484	789624	4	114,134,89,235,	0,1114,14880,25903,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	3867662	3872545	chr1:3867662-3872545	0	+	3867662	3867662	8553170	3	391,171,74,	0,1942,4809,
#Partially deleted in new
chr1	3883506	3885429	chr1:3883506-3885429	0	+	3883506	3883741	789624	2	294,392,	0,1531,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	3889124	3900285	chr1:3889124-3900285	3	-	3889959	3900186	789624	4	949,489,114,114,	0,1444,3758,11047,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	3889124	3900293	chr1:3889124-3900293	0	-	3889124	3889124	8553170	3	949,2428,122,	0,1444,11047,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	3889124	3900247	chr1:3889124-3900247	0	-	3889124	3889124	8553170	5	949,489,114,889,76,	0,1444,3758,6170,11047,
#Partially deleted in new
chr1	3900371	3905532	chr1:3900371-3905532	0	+	3900371	3900371	8553170	3	260,72,302,	0,3593,4859,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	3900403	3917225	chr1:3900403-3917225	3	+	3900403	3900403	8553170	2	228,2831,	0,13991,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	3900415	3915447	chr1:3900415-3915447	1	+	3900415	3900415	789624	4	216,72,599,1053,	0,3549,13276,13979,
#Partially deleted in new
chr1	3940564	3945462	chr1:3940564-3945462	0	+	3940564	3940564	8553170	3	134,150,275,	0,429,4623,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	3940612	3949351	chr1:3940612-3949351	0	+	3940612	3940612	8553170	3	86,150,325,	0,381,8414,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	3940616	3955262	chr1:3940616-3955262	3	+	3940616	3940616	789624	3	82,150,3010,	0,377,11636,
#Deleted in new
chr1	3944546	3948900	chr1:3944546-3948900	3	-	3944546	3944546	8553170	6	595,176,144,54,639,38,	0,947,1773,2728,3410,4316,
#Deleted in new
chr1	3944560	3948900	chr1:3944560-3948900	0	-	3944560	3944560	8553170	4	581,144,639,38,	0,1759,3396,4302,
#Deleted in new
chr1	3947148	3948980	chr1:3947148-3948980	0	-	3947148	3947148	789624	3	180,639,118,	0,808,1714,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	3976132	4012699	chr1:3976132-4012699	3	+	3976132	3976132	8553170	3	63,221,469,	0,749,36098,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	3976139	3998855	chr1:3976139-3998855	1	+	3976139	3976139	8553170	4	56,276,126,800,	0,742,20667,21916,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	3976139	3998058	chr1:3976139-3998058	1	+	3976139	3976139	8553170	6	56,276,50,46,109,3,	0,742,19502,19645,20684,21916,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	4012920	4019508	chr1:4012920-4019508	3	-	4012920	4012920	8553170	2	3786,1031,	0,5557,
#Deleted in new
chr1	4175527	4175899	chr1:4175527-4175899	7	-	4175527	4175527	16724991	1	372,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	4412026	4424689	chr1:4412026-4424689	0	+	4412026	4412026	8553170	5	323,35,237,101,696,	0,3526,4285,11321,11967,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	4412050	4424687	chr1:4412050-4424687	3	+	4412050	4412050	5263520	6	582,35,237,428,101,694,	0,3502,4261,10709,11297,11943,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	4416310	4424689	chr1:4416310-4424689	0	+	4416310	4416310	8553170	4	238,312,101,696,	0,6565,7037,7683,
#Deleted in new
chr1	4479130	4484375	chr1:4479130-4484375	3	-	4479130	4479130	8553170	2	3220,182,	0,5063,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	4551734	4552145	chr1:4551734-4552145	3	-	4551734	4551734	8553170	2	315,41,	0,370,
#Partially deleted in new
chr1	4571480	4594009	chr1:4571480-4594009	3	+	4571480	4571480	8553170	2	149,958,	0,21571,
#Partially deleted in new
chr1	4571503	4583708	chr1:4571503-4583708	0	+	4571503	4571503	8553170	4	126,123,298,367,	0,966,10773,11838,
#Partially deleted in new
chr1	4571547	4583421	chr1:4571547-4583421	1	+	4571547	4571547	8553170	5	82,123,298,96,83,	0,922,10729,11535,11791,
#Partially deleted in new
chr1	4654731	4777794	chr1:4654731-4777794	1	+	4655425	4774499	789624	6	723,800,88,246,132,394,	0,57168,115121,117548,119695,122669,
#Partially deleted in new
chr1	4655044	4792534	chr1:4655044-4792534	3	+	4655425	4774499	789624	6	410,800,88,246,132,9990,	0,56855,114808,117235,119382,127500,
#Deleted in new
chr1	4711154	4712165	chr1:4711154-4712165	0	+	4711154	4711154	8553170	2	32,266,	0,745,
#Partially deleted in new
chr1	4963953	4973298	chr1:4963953-4973298	3	-	4963953	4963953	8553170	3	136,136,192,	0,464,9153,
#Partially deleted in new
chr1	4973380	4981568	chr1:4973380-4981568	3	+	4973380	4973380	8553170	5	167,87,108,130,1088,	0,914,1457,3581,7100,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	5086458	5090899	chr1:5086458-5090899	3	-	5086458	5086458	8553170	4	111,123,48,167,	0,1792,4121,4274,
#Partially deleted in new
chr1	5478735	5492889	chr1:5478735-5492889	0	-	5478735	5478735	8553170	3	106,438,135,	0,12408,14019,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	5480786	5482028	chr1:5480786-5482028	3	-	5480786	5480786	8553170	2	536,73,	0,1169,
#Deleted in new
chr1	5492977	5494674	chr1:5492977-5494674	3	+	5492977	5492977	8553170	1	1697,	0,
#Partially deleted in new
chr1	5554746	5554881	chr1:5554746-5554881	7	+	5554746	5554746	16724991	1	135,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	5561708	5668255	chr1:5561708-5668255	3	-	5561708	5561708	8553170	3	546,186,115,	0,1461,106432,
#Deleted in new
chr1	5564070	5564143	chr1:5564070-5564143	3	+	5564070	5564070	5263520	1	73,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	5587367	5668295	chr1:5587367-5668295	1	-	5587367	5587367	8553170	2	208,155,	0,80773,
#Deleted in new
chr1	5862671	5862741	chr1:5862671-5862741	3	-	5862671	5862671	5263520	1	70,	0,
#Deleted in new
chr1	5862810	5868375	chr1:5862810-5868375	0	-	5862810	5862810	8553170	3	3648,86,636,	0,4219,4929,
#Deleted in new
chr1	5862810	5867652	chr1:5862810-5867652	0	-	5862810	5862810	8553170	3	1223,2121,623,	0,1527,4219,
#Partially deleted in new
chr1	5862810	5992424	chr1:5862810-5992424	0	-	5862810	5862810	8553170	26	595,144,180,172,86,86,157,84,187,227,206,126,181,161,188,192,152,139,183,127,182,137,156,65,173,181,	0,1079,1527,2291,3562,4219,4929,10441,11660,12063,14282,17303,24475,28057,41806,42481,42821,64838,70336,84293,85259,89889,98983,104488,106276,129433,
#Partially deleted in new
chr1	5862812	5992473	chr1:5862812-5992473	0	-	5879504	5986289	789624	33	593,144,180,172,86,86,157,84,187,227,125,138,206,287,126,181,161,188,192,149,108,62,139,183,127,182,137,156,65,173,144,173,230,	0,1077,1525,2289,3560,4217,4927,10439,11658,12061,13141,13573,14280,16533,17301,24473,28055,41804,42479,42819,44302,46339,64836,70334,84291,85257,89887,98981,104486,106274,115457,123342,129431,
#Partially deleted in new
chr1	5862817	5992471	chr1:5862817-5992471	3	-	5863264	5986289	789624	30	588,144,180,172,86,86,157,84,187,227,206,126,181,161,188,192,152,108,62,139,183,127,182,137,156,65,173,144,173,228,	0,1072,1520,2284,3555,4212,4922,10434,11653,12056,14275,17296,24468,28050,41799,42474,42814,44297,46334,64831,70329,84286,85252,89882,98976,104481,106269,115452,123337,129426,
#Partially deleted in new
chr1	5863264	5992447	chr1:5863264-5992447	0	-	5948135	5986289	789624	27	141,144,180,172,86,86,157,84,187,227,206,126,181,161,188,192,149,139,183,127,182,156,65,173,144,173,204,	0,625,1073,1837,3108,3765,4475,9987,11206,11609,13828,16849,24021,27603,41352,42027,42367,64384,69882,83839,84805,98529,104034,105822,115005,122890,128979,
#Partially deleted in new
chr1	5867081	5873841	chr1:5867081-5873841	0	-	5867081	5867081	8553170	3	34,157,590,	0,658,6170,
#Deleted in new
chr1	5874904	5877466	chr1:5874904-5877466	0	-	5874904	5874904	8553170	2	196,374,	0,2188,
#Deleted in new
chr1	5876878	5882849	chr1:5876878-5882849	0	-	5876878	5876878	8553170	2	420,2736,	0,3235,
#Partially deleted in new
chr1	5879504	5992473	chr1:5879504-5992473	1	-	5879504	5986289	789624	20	128,126,181,161,188,192,149,108,62,139,183,127,182,137,156,65,173,144,173,230,	0,609,7781,11363,25112,25787,26127,27610,29647,48144,53642,67599,68565,73195,82289,87794,89582,98765,106650,112739,
#Partially deleted in new
chr1	5886494	5905324	chr1:5886494-5905324	0	-	5888577	5905324	789624	6	478,181,151,161,188,33,	0,791,1965,4373,18122,18797,
#Partially deleted in new
chr1	5991465	6100175	chr1:5991465-6100175	1	+	6040568	6100018	789624	8	91,129,42,44,38,80,45,353,	0,49051,50365,81289,82267,90729,93738,108357,
#Partially deleted in new
chr1	5992362	6101193	chr1:5992362-6101193	3	+	6040568	6098574	0	16	426,129,42,44,38,80,45,45,44,87,86,121,95,121,89,2709,	0,48154,49468,80392,81370,89832,92841,95104,96645,98026,102037,102960,103167,104273,104906,106122,
#Partially deleted in new
chr1	5992672	6007660	chr1:5992672-6007660	0	+	5992672	5992672	8553170	3	116,222,222,	0,3190,14766,
#Partially deleted in new
chr1	5992700	6098574	chr1:5992700-6098574	1	+	6040568	6098574	0	15	88,129,44,38,80,45,45,44,87,86,121,95,121,89,90,	0,47816,80054,81032,89494,92503,94766,96307,97688,101699,102622,102829,103935,104568,105784,
#Partially deleted in new
chr1	5992705	6073847	chr1:5992705-6073847	0	+	5992705	5992705	8553170	5	83,129,42,44,115,	0,47811,49125,80049,81027,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	5992710	6072790	chr1:5992710-6072790	0	+	6040568	6072790	789624	5	78,201,129,42,36,	0,25924,47806,49120,80044,
#Partially deleted in new
chr1	6026012	6101192	chr1:6026012-6101192	1	+	6040568	6098574	0	16	433,129,42,44,38,80,45,45,44,87,86,121,95,121,89,2708,	0,14504,15818,46742,47720,56182,59191,61454,62995,64376,68387,69310,69517,70623,71256,72472,
#Partially deleted in new
chr1	6026012	6101192	chr1:6026012-6101192	1	+	6040568	6098574	0	15	433,129,44,38,80,45,45,44,87,86,121,95,121,89,2708,	0,14504,46742,47720,56182,59191,61454,62995,64376,68387,69310,69517,70623,71256,72472,
#Partially deleted in new
chr1	6026299	6095581	chr1:6026299-6095581	0	+	6040568	6095581	789624	13	146,129,42,44,38,80,45,45,44,87,86,121,52,	0,14217,15531,46455,47433,55895,58904,61167,62708,64089,68100,69023,69230,
#Partially deleted in new
chr1	6026299	6095625	chr1:6026299-6095625	0	+	6040568	6095625	789624	12	146,129,44,38,80,45,45,44,87,86,121,96,	0,14217,46455,47433,55895,58904,61167,62708,64089,68100,69023,69230,
#Partially deleted in new
chr1	6026319	6098561	chr1:6026319-6098561	1	+	6040568	6097531	0	15	126,129,42,44,38,80,45,45,44,87,86,121,95,121,1293,	0,14197,15511,46435,47413,55875,58884,61147,62688,64069,68080,69003,69210,70316,70949,
#Partially deleted in new
chr1	6027296	6085249	chr1:6027296-6085249	0	+	6027296	6027296	8553170	6	163,129,44,38,80,46,	0,13220,45458,46436,54898,57907,
#Partially deleted in new
chr1	6034282	6101179	chr1:6034282-6101179	1	+	6040568	6098574	0	16	512,129,42,44,38,80,45,45,44,87,86,121,95,121,89,2695,	0,6234,7548,38472,39450,47912,50921,53184,54725,56106,60117,61040,61247,62353,62986,64202,
#Partially deleted in new
chr1	6035916	6041762	chr1:6035916-6041762	0	+	6035916	6035916	8553170	3	132,129,595,	0,4600,5251,
#Partially deleted in new
chr1	6040617	6086362	chr1:6040617-6086362	0	+	6040617	6086314	789624	8	28,42,44,38,80,45,54,205,	0,1213,32137,33115,41577,44586,45122,45540,
#Partially deleted in new
chr1	6045920	6101179	chr1:6045920-6101179	1	+	6051536	6098574	0	16	263,244,44,38,80,45,45,44,87,45,86,121,95,121,89,2695,	0,5590,26834,27812,36274,39283,41546,43087,44468,45342,48479,49402,49609,50715,51348,52564,
#Partially deleted in new
chr1	6046113	6098855	chr1:6046113-6098855	1	+	6082194	6098574	0	14	70,44,38,80,45,45,44,87,86,121,95,121,89,371,	0,26641,27619,36081,39090,41353,42894,44275,48286,49209,49416,50522,51155,52371,
#Partially deleted in new
chr1	6082260	6086363	chr1:6082260-6086363	0	+	6082260	6086049	789624	3	14,45,624,	0,2943,3479,
#Deleted in new
chr1	6096255	6098810	chr1:6096255-6098810	0	+	6096255	6096255	8553170	3	501,89,326,	0,1013,2229,
#Partially deleted in new
chr1	6101792	6180123	chr1:6101792-6180123	3	-	6106279	6180023	789624	42	3635,54,115,164,196,133,109,138,90,133,80,160,145,134,89,93,175,173,111,232,125,118,132,142,174,122,138,201,192,109,132,212,207,222,167,124,125,239,119,180,128,179,	0,4441,4602,4823,8002,8601,9982,10347,11116,19312,19701,22155,22724,23307,23731,23973,24779,26253,26706,27045,28411,29838,32335,32925,33437,34724,34935,40335,40621,42030,42231,44419,44872,47061,47453,49239,50619,52867,53806,57543,66357,78152,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr1	6105080	6144104	chr1:6105080-6144104	0	-	6112982	6144104	789624	31	347,54,164,196,133,109,138,90,106,133,80,160,145,134,89,93,175,173,111,232,125,118,132,142,174,122,138,201,192,109,81,	0,1153,1535,4714,5313,6694,7059,7828,8230,16024,16413,18867,19436,20019,20443,20685,21491,22965,23418,23757,25123,26550,29047,29637,30149,31436,31647,37047,37333,38742,38943,
#Deleted in new
chr1	6105080	6106772	chr1:6105080-6106772	0	-	6105367	6106772	789624	3	347,54,157,	0,1153,1535,
#Partially deleted in new
chr1	6105082	6131739	chr1:6105082-6131739	0	-	6129026	6131739	789624	21	345,54,164,196,133,109,138,90,133,80,160,145,134,89,93,175,173,111,232,181,109,	0,1151,1533,4712,5311,6692,7057,7826,16022,16411,18865,19434,20017,20441,20683,21489,22963,23416,23755,25065,26548,
#Partially deleted in new
chr1	6105090	6180023	chr1:6105090-6180023	0	-	6112950	6180023	789624	34	337,54,115,164,196,133,109,138,90,133,80,30,125,118,132,142,174,122,138,201,192,109,132,212,207,222,167,124,125,239,119,180,128,79,	0,1143,1304,1525,4704,5303,6684,7049,7818,16014,16403,23949,25113,26540,29037,29627,30139,31426,31637,37037,37323,38732,38933,41121,41574,43763,44155,45941,47321,49569,50508,54245,63059,74854,
#Partially deleted in new
chr1	6125533	6128542	chr1:6125533-6128542	0	-	6126663	6128542	789624	6	79,93,175,82,173,44,	0,232,1038,1549,2512,2965,
#Partially deleted in new
chr1	6159429	6197757	chr1:6159429-6197757	3	-	6181467	6197669	789624	5	86,128,218,125,106,	0,8720,21839,33500,38222,
#Partially deleted in new
chr1	6185019	6199612	chr1:6185019-6199612	3	-	6186671	6199573	0	4	1797,125,105,51,	0,7910,12632,14542,
#Partially deleted in new
chr1	6186574	6199563	chr1:6186574-6199563	0	-	6186574	6186574	8553170	3	242,125,1912,	0,6355,11077,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	6186614	6200842	chr1:6186614-6200842	1	-	6186671	6197669	789624	4	202,125,105,354,	0,6315,11037,13874,
#Partially deleted in new
chr1	6186691	6209244	chr1:6186691-6209244	0	-	6186691	6197669	789624	5	125,125,105,59,110,	0,6238,10960,21989,22443,
#Partially deleted in new
chr1	6186722	6199553	chr1:6186722-6199553	0	-	6186722	6197669	789624	4	94,125,105,184,	0,6207,10929,12647,
#Partially deleted in new
chr1	6192926	6203494	chr1:6192926-6203494	0	-	6192926	6197669	789624	4	128,105,239,128,	0,4725,7562,10440,
#Partially deleted in new
chr1	6192929	6209389	chr1:6192929-6209389	0	-	6192929	6197669	789624	5	125,105,262,59,255,	0,4722,7559,15751,16205,
#Partially deleted in new
chr1	6204839	6205780	chr1:6204839-6205780	3	-	6204839	6204839	789624	3	143,208,27,	0,366,914,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	6205474	6208307	chr1:6205474-6208307	0	+	6205474	6205474	8553170	4	627,107,191,929,	0,721,1061,1904,
#Deleted in new
chr1	6206128	6207564	chr1:6206128-6207564	0	+	6206128	6206128	8553170	3	174,191,186,	0,407,1250,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	6206175	6221299	chr1:6206175-6221299	3	+	6206535	6219407	789624	18	127,191,133,145,82,76,126,47,73,69,69,98,187,186,52,118,81,2064,	0,360,1203,2705,2939,3092,3238,3748,4047,4194,4694,4845,5691,6055,6506,6890,12113,13060,
#Deleted in new
chr1	6208617	6210900	chr1:6208617-6210900	0	+	6208617	6208617	8553170	6	408,82,272,47,73,531,	0,497,650,1306,1605,1752,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	6208859	6220805	chr1:6208859-6220805	0	+	6208859	6208859	8553170	10	166,126,47,73,69,187,199,502,81,1570,	0,554,1064,1363,1510,3007,3358,3822,9429,10376,
#Deleted in new
chr1	6210901	6212053	chr1:6210901-6212053	0	+	6210901	6210901	8553170	3	37,98,131,	0,119,1021,
#Deleted in new
chr1	6210937	6211916	chr1:6210937-6211916	0	+	6210937	6210937	8553170	2	181,50,	0,929,
#Deleted in new
chr1	6211034	6212836	chr1:6211034-6212836	0	+	6211034	6211034	8553170	4	84,187,186,155,	0,832,1196,1647,
#Partially deleted in new
chr1	6212737	6219343	chr1:6212737-6219343	0	+	6212737	6212737	8553170	4	166,118,81,108,	0,328,5551,6498,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	6221192	6235940	chr1:6221192-6235940	3	-	6225079	6235911	789624	5	4070,218,170,89,224,	0,10709,12281,13693,14524,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	6221897	6223502	chr1:6221897-6223502	0	-	6221897	6221897	8553170	2	263,65,	0,1540,
#Partially deleted in new
chr1	6223490	6235972	chr1:6223490-6235972	0	-	6234444	6235911	789624	6	1772,218,170,107,89,256,	0,8411,9983,10914,11395,12226,
#Partially deleted in new
chr1	6224598	6235972	chr1:6224598-6235972	0	-	6232118	6235911	789624	4	664,218,89,256,	0,7303,10287,11118,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	6234691	6239408	chr1:6234691-6239408	3	+	6234691	6234691	8553170	4	372,101,379,1188,	0,2553,2778,3529,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	6236239	6238940	chr1:6236239-6238940	1	+	6236239	6236239	789624	5	97,185,101,35,720,	0,726,1005,1574,1981,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	6237770	6239444	chr1:6237770-6239444	0	+	6237770	6237770	8553170	2	78,1224,	0,450,
#Partially deleted in new
chr1	6244191	6245578	chr1:6244191-6245578	3	+	6244365	6245507	789624	4	50,96,82,469,	0,159,356,918,
#Partially deleted in new
chr1	6247345	6260975	chr1:6247345-6260975	3	-	6249337	6254905	789624	6	2658,185,193,430,465,151,	0,3094,3992,6372,7204,13479,
#Partially deleted in new
chr1	6264268	6393361	chr1:6264268-6393361	1	-	6264596	6393303	0	9	427,185,117,87,115,92,157,118,105,	0,16833,30595,54223,63030,69208,75164,85480,128988,
#Partially deleted in new
chr1	6264272	6394391	chr1:6264272-6394391	1	-	6264596	6393399	0	9	423,185,117,87,115,92,157,118,1135,	0,16829,30591,54219,63026,69204,75160,85476,128984,
#Partially deleted in new
chr1	6264272	6359344	chr1:6264272-6359344	1	-	6264596	6358845	0	9	423,185,117,87,115,92,157,118,519,	0,16829,30591,54219,63026,69204,75160,85476,94553,
#Partially deleted in new
chr1	6264272	6360707	chr1:6264272-6360707	1	-	6264596	6360652	0	9	423,185,117,87,115,92,157,118,138,	0,16829,30591,54219,63026,69204,75160,85476,96297,
#Partially deleted in new
chr1	6264272	6385813	chr1:6264272-6385813	3	-	6264596	6385666	0	9	423,185,117,87,115,92,157,118,320,	0,16829,30591,54219,63026,69204,75160,85476,121221,
#Partially deleted in new
chr1	6264272	6393361	chr1:6264272-6393361	0	-	6281240	6393303	0	10	423,185,73,117,87,115,92,157,118,105,	0,16829,18451,30591,54219,63026,69204,75160,85476,128984,
#Partially deleted in new
chr1	6264272	6393361	chr1:6264272-6393361	0	-	6282880	6393303	0	10	423,185,165,117,87,115,92,157,118,105,	0,16829,18451,30591,54219,63026,69204,75160,85476,128984,
#Partially deleted in new
chr1	6264272	6393766	chr1:6264272-6393766	1	-	6264596	6393399	0	9	423,185,117,87,115,92,157,118,510,	0,16829,30591,54219,63026,69204,75160,85476,128984,
#Partially deleted in new
chr1	6281129	6352249	chr1:6281129-6352249	0	-	6281129	6349862	789624	8	157,117,87,115,92,157,118,25,	0,13734,37362,46169,52347,58303,68619,71095,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	6281252	6295504	chr1:6281252-6295504	0	-	6281252	6281252	8553170	3	34,73,641,	0,1471,13611,
#Partially deleted in new
chr1	6393554	6394391	chr1:6393554-6394391	3	+	6393554	6393554	8553170	1	837,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	6412417	6424670	chr1:6412417-6424670	1	-	6413192	6419820	789624	4	865,96,68,193,	0,7189,7358,12060,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	6412999	6419903	chr1:6412999-6419903	1	-	6413192	6419820	789624	3	283,96,128,	0,6607,6776,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	6413049	6416631	chr1:6413049-6416631	0	-	6413049	6413049	8553170	2	233,116,	0,3466,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	6415231	6419919	chr1:6415231-6419919	3	-	6418872	6419820	789624	4	3922,100,96,144,	0,4009,4375,4544,
#Deleted in new
chr1	6418413	6419907	chr1:6418413-6419907	1	-	6419060	6419820	789624	3	740,96,132,	0,1193,1362,
#Deleted in new
chr1	6418848	6419917	chr1:6418848-6419917	1	-	6419232	6419820	789624	3	492,96,142,	0,758,927,
#Partially deleted in new
chr1	6424775	6460944	chr1:6424775-6460944	3	+	6424955	6460146	789624	13	474,194,187,183,132,202,272,451,146,264,80,12,946,	0,3450,15478,15850,16158,19705,20888,23865,26827,27057,32408,32585,35223,
#Partially deleted in new
chr1	6424787	6460944	chr1:6424787-6460944	1	+	6424955	6460146	789624	13	462,194,187,183,132,202,272,451,146,264,80,12,946,	0,3438,15466,15838,16146,19693,20876,23853,26815,27045,32396,32573,35211,
#Partially deleted in new
chr1	6424787	6456671	chr1:6424787-6456671	1	+	6424955	6456197	789624	11	462,194,187,183,132,202,272,451,146,264,2238,	0,3438,15466,15838,16146,19693,20876,23853,26815,27045,29646,
#Deleted in new
chr1	6429833	6429896	chr1:6429833-6429896	3	-	6429833	6429833	5263520	1	63,	0,
#Partially deleted in new
chr1	6437299	6440797	chr1:6437299-6440797	0	+	6437299	6437299	8553170	3	207,187,172,	0,2954,3326,
#Partially deleted in new
chr1	6437567	6440822	chr1:6437567-6440822	0	+	6437567	6437567	8553170	3	180,187,197,	0,2686,3058,
#Partially deleted in new
chr1	6440377	6445757	chr1:6440377-6445757	0	+	6440377	6445757	789624	5	63,150,132,202,94,	0,281,556,4103,5286,
#Deleted in new
chr1	6447330	6449056	chr1:6447330-6449056	0	+	6448784	6449056	789624	3	129,162,164,	0,1310,1562,
#Deleted in new
chr1	6447350	6449037	chr1:6447350-6449037	0	+	6448784	6449037	789624	2	109,397,	0,1290,
#Partially deleted in new
chr1	6448042	6460398	chr1:6448042-6460398	1	+	6448784	6460146	789624	8	75,162,199,146,264,81,9,402,	0,598,850,3560,3790,9141,9223,11954,
#Partially deleted in new
chr1	6448042	6460399	chr1:6448042-6460399	1	+	6448784	6460146	789624	8	75,162,199,146,264,80,12,401,	0,598,850,3560,3790,9141,9318,11956,
#Partially deleted in new
chr1	6448466	6460052	chr1:6448466-6460052	0	+	6451619	6460052	789624	7	95,162,146,264,80,12,54,	0,174,3136,3366,8717,8894,11532,
#Deleted in new
chr1	6448519	6448958	chr1:6448519-6448958	0	+	6448784	6448958	789624	3	42,162,66,	0,121,373,
#Partially deleted in new
chr1	6449054	6460926	chr1:6449054-6460926	0	+	6449054	6460146	789624	7	37,27,146,264,80,12,928,	0,1389,2548,2778,8129,8306,10944,
#Deleted in new
chr1	6450373	6451949	chr1:6450373-6451949	0	+	6451619	6451949	789624	3	97,146,117,	0,1229,1459,
#Partially deleted in new
chr1	6451316	6457263	chr1:6451316-6457263	0	+	6451330	6457263	789624	4	54,146,264,80,	0,286,516,5867,
#Partially deleted in new
chr1	6451657	6461367	chr1:6451657-6461367	0	+	6451657	6461185	789624	6	91,264,80,12,112,188,	0,175,5526,5703,8341,9522,
#Partially deleted in new
chr1	6451716	6460405	chr1:6451716-6460405	0	+	6451716	6460146	789624	4	380,80,12,407,	0,5467,5644,8282,
#Deleted in new
chr1	6460507	6461367	chr1:6460507-6461367	0	+	6460507	6460507	8553170	2	473,188,	0,672,
#Partially deleted in new
chr1	6460785	6465470	chr1:6460785-6465470	0	-	6461433	6465470	8553170	9	977,181,35,108,56,79,168,135,31,	0,1208,1843,2077,2286,3589,3766,4302,4654,
#Partially deleted in new
chr1	6461150	6466195	chr1:6461150-6466195	1	-	6461433	6466107	789624	10	612,181,38,108,56,79,168,135,121,127,	0,843,1478,1712,1921,3224,3401,3937,4289,4918,
#Partially deleted in new
chr1	6461150	6466175	chr1:6461150-6466175	3	-	6461433	6466107	789624	10	612,181,38,108,83,79,168,135,121,107,	0,843,1478,1712,1914,3224,3401,3937,4289,4918,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	6461150	6463622	chr1:6461150-6463622	0	-	6461150	6461150	8553170	4	612,181,38,760,	0,843,1478,1712,
#Partially deleted in new
chr1	6461150	6466175	chr1:6461150-6466175	0	-	6462907	6466107	789624	9	612,181,38,265,79,168,135,121,107,	0,843,1478,1712,3224,3401,3937,4289,4918,
#Partially deleted in new
chr1	6461150	6466175	chr1:6461150-6466175	0	-	6462659	6466107	789624	9	612,181,38,285,79,168,135,121,107,	0,843,1478,1712,3224,3401,3937,4289,4918,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	6461150	6466099	chr1:6461150-6466099	0	-	6461150	6461150	8553170	6	612,181,38,1857,135,660,	0,843,1478,1712,3937,4289,
#Partially deleted in new
chr1	6461203	6466175	chr1:6461203-6466175	1	-	6461433	6466107	789624	9	559,181,35,56,79,168,135,121,107,	0,790,1425,1868,3171,3348,3884,4236,4865,
#Partially deleted in new
chr1	6461433	6466107	chr1:6461433-6466107	1	-	6461433	6466107	789624	9	329,181,38,108,56,79,168,121,39,	0,560,1195,1429,1638,2941,3118,4006,4635,
#Partially deleted in new
chr1	6461433	6466107	chr1:6461433-6466107	1	-	6461433	6466107	789624	5	329,181,35,121,39,	0,560,1195,4006,4635,
#Partially deleted in new
chr1	6461433	6466107	chr1:6461433-6466107	0	-	6462659	6466107	789624	9	329,181,38,108,79,168,135,121,39,	0,560,1195,1429,2941,3118,3654,4006,4635,
#Partially deleted in new
chr1	6461433	6466107	chr1:6461433-6466107	0	-	6462659	6466107	789624	7	329,181,35,79,168,121,39,	0,560,1195,2941,3118,4006,4635,
#Partially deleted in new
chr1	6461433	6466107	chr1:6461433-6466107	0	-	6462121	6466107	789624	5	329,181,168,121,39,	0,560,3118,4006,4635,
#Partially deleted in new
chr1	6461433	6466107	chr1:6461433-6466107	0	-	6462659	6466107	789624	8	329,181,35,79,168,135,121,39,	0,560,1195,2941,3118,3654,4006,4635,
#Deleted in new
chr1	6461479	6463347	chr1:6461479-6463347	0	-	6461479	6461479	8553170	4	283,181,35,485,	0,514,1149,1383,
#Deleted in new
chr1	6461755	6462607	chr1:6461755-6462607	0	-	6461755	6461755	8553170	3	7,181,289,	0,238,563,
#Partially deleted in new
chr1	6461993	6465272	chr1:6461993-6465272	0	-	6461993	6461993	8553170	7	181,38,94,56,79,168,185,	0,635,869,1078,2381,2558,3094,
#Partially deleted in new
chr1	6462636	6465630	chr1:6462636-6465630	0	-	6462636	6463072	789624	7	27,108,56,79,168,135,191,	0,226,435,1738,1915,2451,2803,
#Deleted in new
chr1	6464110	6466099	chr1:6464110-6466099	0	-	6464110	6464110	8553170	5	343,168,135,121,31,	0,441,977,1329,1958,
#Deleted in new
chr1	6464566	6465858	chr1:6464566-6465858	0	-	6464566	6464566	8553170	2	153,419,	0,873,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr1	6466091	6490580	chr1:6466091-6490580	1	-	6467562	6477571	789624	21	1481,762,200,116,133,120,138,150,111,150,51,96,189,204,152,137,92,61,106,130,136,	0,1733,2950,3243,3452,4144,4414,4643,4898,5396,5666,6435,6894,7159,7921,8359,8955,9370,9839,11437,24353,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr1	6466091	6520009	chr1:6466091-6520009	1	-	6467562	6519511	789624	22	1481,762,200,116,133,120,138,150,111,150,51,96,189,204,152,137,92,61,106,130,77,565,	0,1733,2950,3243,3452,4144,4414,4643,4898,5396,5666,6435,6894,7159,7921,8359,8955,9370,9839,11437,30401,53353,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr1	6466091	6485954	chr1:6466091-6485954	1	-	6467562	6477571	789624	21	1481,762,200,116,133,120,138,150,111,150,51,96,189,204,152,137,92,61,106,130,119,	0,1733,2950,3243,3452,4144,4414,4643,4898,5396,5666,6435,6894,7159,7921,8359,8955,9370,9839,11437,19744,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	6466091	6477588	chr1:6466091-6477588	0	-	6466091	6466091	8553170	19	1481,762,200,116,133,120,138,150,111,150,51,96,189,204,152,688,61,106,60,	0,1733,2950,3243,3452,4144,4414,4643,4898,5396,5666,6435,6894,7159,7921,8359,9370,9839,11437,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr1	6466091	6485469	chr1:6466091-6485469	1	-	6467562	6485443	789624	21	1481,762,200,116,133,120,138,150,111,150,51,96,189,204,152,137,92,61,106,130,146,	0,1733,2950,3243,3452,4144,4414,4643,4898,5396,5666,6435,6894,7159,7921,8359,8955,9370,9839,11437,19232,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr1	6466091	6497096	chr1:6466091-6497096	1	-	6467562	6497031	789624	22	1481,762,200,116,133,120,138,150,111,150,51,96,189,204,152,137,92,61,106,130,77,138,	0,1733,2950,3243,3452,4144,4414,4643,4898,5396,5666,6435,6894,7159,7921,8359,8955,9370,9839,11437,30401,30867,
#Partially deleted in new
chr1	6467121	6490570	chr1:6467121-6490570	1	-	6467842	6477571	789624	22	451,74,488,200,116,133,120,138,150,111,150,51,96,189,204,152,137,92,61,106,130,126,	0,703,977,1920,2213,2422,3114,3384,3613,3868,4366,4636,5405,5864,6129,6891,7329,7925,8340,8809,10407,23323,
#Partially deleted in new
chr1	6467121	6491700	chr1:6467121-6491700	3	-	6467562	6477571	789624	21	451,762,200,116,133,120,138,150,111,150,51,96,189,204,152,137,92,61,106,130,64,	0,703,1920,2213,2422,3114,3384,3613,3868,4366,4636,5405,5864,6129,6891,7329,7925,8340,8809,10407,24515,
#Partially deleted in new
chr1	6467121	6496696	chr1:6467121-6496696	1	-	6467562	6496516	789624	21	451,762,200,116,133,120,138,150,111,150,51,96,189,204,152,137,92,61,106,130,204,	0,703,1920,2213,2422,3114,3384,3613,3868,4366,4636,5405,5864,6129,6891,7329,7925,8340,8809,10407,29371,
#Partially deleted in new
chr1	6467121	6520061	chr1:6467121-6520061	1	-	6467562	6519511	789624	22	451,69,200,116,133,120,138,150,111,150,51,96,189,204,152,137,92,61,106,130,77,617,	0,703,1920,2213,2422,3114,3384,3613,3868,4366,4636,5405,5864,6129,6891,7329,7925,8340,8809,10407,29371,52323,
#Partially deleted in new
chr1	6467121	6497390	chr1:6467121-6497390	1	-	6467562	6497323	789624	22	451,762,200,116,133,120,138,150,111,150,51,96,189,204,152,137,92,61,106,130,77,71,	0,703,1920,2213,2422,3114,3384,3613,3868,4366,4636,5405,5864,6129,6891,7329,7925,8340,8809,10407,29371,30198,
#Deleted in new
chr1	6467121	6471583	chr1:6467121-6471583	0	-	6467121	6467121	8553170	9	451,762,200,116,133,120,138,150,594,	0,703,1920,2213,2422,3114,3384,3613,3868,
#Partially deleted in new
chr1	6496492	6506158	chr1:6496492-6506158	0	-	6496492	6506158	789624	2	77,133,	0,9533,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	6521346	6554535	chr1:6521346-6554535	3	-	6525853	6554502	789624	12	4657,134,178,112,298,162,98,97,136,128,220,429,	0,5349,7647,10621,11116,11933,20483,23479,23698,28224,29049,32760,
#Partially deleted in new
chr1	6531994	6545017	chr1:6531994-6545017	0	-	6531994	6531994	8553170	5	85,298,162,98,192,	0,468,1285,9835,12831,
#Partially deleted in new
chr1	6532228	6533385	chr1:6532228-6533385	0	-	6532228	6532228	8553170	2	532,106,	0,1051,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	6540853	6540964	chr1:6540853-6540964	3	+	6540853	6540853	8553170	1	111,	0,
#Partially deleted in new
chr1	6547904	6548619	chr1:6547904-6548619	7	+	6547904	6547904	16724991	2	229,172,	0,543,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	6549255	6550488	chr1:6549255-6550488	0	-	6549255	6549255	8553170	2	443,93,	0,1140,
#Partially deleted in new
chr1	6549361	6554500	chr1:6549361-6554500	0	-	6549361	6549361	8553170	2	337,394,	0,4745,
#Partially deleted in new
chr1	6555180	6579757	chr1:6555180-6579757	3	+	6555373	6579584	789624	6	384,307,762,213,121,1105,	0,15728,19450,21234,21769,23472,
#Partially deleted in new
chr1	6555308	6579626	chr1:6555308-6579626	1	+	6555373	6579584	789624	5	256,307,213,121,974,	0,15600,21106,21641,23344,
#Partially deleted in new
chr1	6570940	6579426	chr1:6570940-6579426	0	+	6570940	6578835	789624	3	275,762,774,	0,3690,7712,
#Partially deleted in new
chr1	6570940	6579426	chr1:6570940-6579426	0	+	6570940	6579426	789624	4	275,213,121,131,	0,5474,6009,8355,
#Partially deleted in new
chr1	6580000	6582299	chr1:6580000-6582299	0	+	6580609	6582299	789624	3	49,759,242,	0,540,2057,
#Partially deleted in new
chr1	6580016	6582245	chr1:6580016-6582245	0	+	6580609	6582245	789624	3	54,759,188,	0,524,2041,
#Partially deleted in new
chr1	6580047	6589280	chr1:6580047-6589280	3	+	6580609	6589212	0	11	89,759,242,112,93,87,155,137,165,89,365,	0,493,2010,5871,6647,7157,7430,8012,8230,8708,8868,
#Partially deleted in new
chr1	6580087	6588105	chr1:6580087-6588105	0	+	6582102	6588105	789624	7	49,242,112,93,87,155,46,	0,1970,5831,6607,7117,7390,7972,
#Deleted in new
chr1	6585301	6589280	chr1:6585301-6589280	0	+	6585301	6585301	8553170	7	1486,87,155,137,165,89,365,	0,1903,2176,2758,2976,3454,3614,
#Deleted in new
chr1	6586206	6589280	chr1:6586206-6589280	0	+	6586206	6586206	8553170	3	1085,155,1221,	0,1271,1853,
#Deleted in new
chr1	6587255	6589160	chr1:6587255-6589160	0	+	6587255	6588373	789624	6	36,118,137,165,89,245,	0,259,804,1022,1500,1660,
#Deleted in new
chr1	6588686	6589280	chr1:6588686-6589280	0	+	6588686	6588686	8553170	2	158,365,	0,229,
#Partially deleted in new
chr1	6590723	6602869	chr1:6590723-6602869	3	-	6593364	6602817	789624	4	2935,73,406,1073,	0,4761,8323,11073,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	6590723	6603001	chr1:6590723-6603001	1	-	6595364	6602817	789624	3	4834,406,1205,	0,8323,11073,
#Partially deleted in new
chr1	6593192	6614560	chr1:6593192-6614560	1	-	6593364	6599372	789624	4	466,73,406,111,	0,2292,5854,21257,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	6593204	6603684	chr1:6593204-6603684	1	-	6593364	6593472	789624	2	1714,231,	0,10249,
#Partially deleted in new
chr1	6593380	6599816	chr1:6593380-6599816	0	-	6593380	6599372	789624	4	278,73,406,67,	0,2104,5666,6369,
#Partially deleted in new
chr1	6594080	6614607	chr1:6594080-6614607	1	-	6594107	6599372	789624	4	30,73,406,158,	0,1404,4966,20369,
#Partially deleted in new
chr1	6613684	6624033	chr1:6613684-6624033	3	+	6614066	6621637	0	4	421,102,535,2623,	0,3072,6118,7726,
#Partially deleted in new
chr1	6613761	6622645	chr1:6613761-6622645	0	+	6613761	6613761	8553170	2	344,454,	0,8430,
#Partially deleted in new
chr1	6624865	6633565	chr1:6624865-6633565	1	+	6625218	6633077	789624	6	89,143,193,66,105,770,	0,284,3633,5422,7525,7930,
#Partially deleted in new
chr1	6625170	6628519	chr1:6625170-6628519	0	+	6625170	6625170	8553170	2	122,757,	0,2592,
#Partially deleted in new
chr1	6625180	6633368	chr1:6625180-6633368	1	+	6625218	6633077	789624	5	112,193,63,105,573,	0,3318,5110,7210,7615,
#Partially deleted in new
chr1	6625191	6635586	chr1:6625191-6635586	3	+	6625218	6634088	789624	5	101,193,66,126,1567,	0,3307,5096,7178,8828,
#Partially deleted in new
chr1	6625197	6633273	chr1:6625197-6633273	0	+	6625197	6625197	8553170	4	95,66,105,478,	0,5090,7193,7598,
#Partially deleted in new
chr1	6625224	6633121	chr1:6625224-6633121	0	+	6625224	6630319	789624	6	68,193,82,66,105,326,	0,3274,4418,5063,7166,7571,
#Partially deleted in new
chr1	6625229	6633051	chr1:6625229-6633051	0	+	6625229	6632762	789624	4	63,193,66,661,	0,3269,5058,7161,
#Partially deleted in new
chr1	6628394	6630326	chr1:6628394-6630326	0	+	6628394	6628394	8553170	2	297,39,	0,1893,
#Partially deleted in new
chr1	6634167	6701924	chr1:6634167-6701924	3	-	6635674	6701800	789624	16	1533,130,143,58,70,156,117,86,190,74,123,129,102,74,130,196,	0,1949,3030,3279,4127,5734,10390,10873,11621,17361,18661,19743,33541,44226,46740,67561,
#Partially deleted in new
chr1	6634167	6681037	chr1:6634167-6681037	0	-	6634525	6681037	789624	8	617,108,74,123,129,102,74,130,	0,11703,17361,18661,19743,33541,44226,46740,
#Partially deleted in new
chr1	6634167	6645057	chr1:6634167-6645057	0	-	6634167	6634167	8553170	7	1533,130,143,918,156,117,17,	0,1949,3030,3279,5734,10390,10873,
#Partially deleted in new
chr1	6635112	6701924	chr1:6635112-6701924	1	-	6635674	6701800	789624	15	588,130,143,58,70,117,86,190,74,123,129,102,74,130,196,	0,1004,2085,2334,3182,9445,9928,10676,16416,17716,18798,32596,43281,45795,66616,
#Partially deleted in new
chr1	6637300	6645112	chr1:6637300-6645112	0	-	6637300	6637300	8553170	6	40,58,282,156,117,72,	0,146,782,2601,7257,7740,
#Partially deleted in new
chr1	6645799	6701802	chr1:6645799-6701802	0	-	6645799	6701800	789624	8	179,164,123,129,102,74,130,74,	0,5217,7029,8111,21909,32594,35108,55929,
#Partially deleted in new
chr1	6645875	6701822	chr1:6645875-6701822	0	-	6645875	6645875	8553170	7	103,74,123,129,102,130,94,	0,5653,6953,8035,21833,35032,55853,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	6652913	6668210	chr1:6652913-6668210	0	-	6652913	6652913	8553170	4	38,129,102,86,	0,997,14795,15211,
#Partially deleted in new
chr1	6653808	6701804	chr1:6653808-6701804	0	-	6653808	6653808	8553170	5	231,102,74,130,76,	0,13900,24585,27099,47920,
#Partially deleted in new
chr1	6654107	6701823	chr1:6654107-6701823	0	-	6654107	6654107	8553170	5	180,102,74,130,95,	0,13601,24286,26800,47621,
#Partially deleted in new
chr1	6670460	6701819	chr1:6670460-6701819	0	-	6670460	6670460	8553170	4	450,74,130,91,	0,7933,10447,31268,
#Partially deleted in new
chr1	6724636	6730012	chr1:6724636-6730012	0	+	6724636	6724636	789624	2	214,293,	0,5083,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	6724636	6727408	chr1:6724636-6727408	1	+	6724636	6724636	8553170	2	214,1472,	0,1300,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	6724669	6727444	chr1:6724669-6727444	0	+	6724669	6724669	8553170	2	181,364,	0,2411,
#Partially deleted in new
chr1	6724672	6729989	chr1:6724672-6729989	3	+	6724672	6724672	8553170	3	183,180,270,	0,2760,5047,
#Partially deleted in new
chr1	6724776	6730012	chr1:6724776-6730012	0	+	6724776	6724776	8553170	3	74,180,293,	0,2656,4943,
#Deleted in new
chr1	6783891	6784843	chr1:6783891-6784843	3	-	6783891	6783891	8553170	3	154,75,186,	0,257,766,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr1	6785323	7769706	chr1:6785323-7769706	3	+	6785530	7766491	0	23	252,70,119,68,136,72,154,141,1847,127,135,152,197,79,316,524,188,247,72,194,75,31,3248,	0,34857,39768,305980,464167,682506,855076,876402,878029,885587,892275,947124,951020,951607,951931,952635,959511,960521,962386,965875,967135,970314,981135,
#Partially deleted in new
chr1	6785453	6872053	chr1:6785453-6872053	0	+	6785453	6785453	8553170	3	122,119,297,	0,39638,86303,
#Partially deleted in new
chr1	6785463	6888201	chr1:6785463-6888201	0	+	6785463	6785463	789624	4	112,119,84,548,	0,39628,86293,102190,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	6785479	6872038	chr1:6785479-6872038	1	+	6785530	6871765	0	4	96,70,119,282,	0,34701,39612,86277,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	6785490	6887865	chr1:6785490-6887865	1	+	6785530	6887725	0	4	85,70,119,212,	0,34690,39601,102163,
#Partially deleted in new
chr1	6785517	6872019	chr1:6785517-6872019	1	+	6785530	6871765	789624	4	58,106,119,263,	0,21465,39574,86239,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	6785551	6887787	chr1:6785551-6887787	0	+	6785551	6871765	789624	5	24,70,119,84,134,	0,34629,39540,86205,102102,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	6806987	6871858	chr1:6806987-6871858	0	+	6806987	6820212	789624	4	101,70,119,102,	0,13193,18104,64769,
#Partially deleted in new
chr1	6825109	6888188	chr1:6825109-6888188	0	+	6825109	6886257	789624	3	101,107,535,	0,61130,62544,
#Deleted in new
chr1	6834332	6834618	chr1:6834332-6834618	7	-	6834332	6834332	16724991	1	286,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	6853047	6888193	chr1:6853047-6888193	0	+	6853047	6853047	8553170	3	142,84,540,	0,18709,34606,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	6853051	6888150	chr1:6853051-6888150	0	+	6853051	6853051	8553170	4	138,84,107,497,	0,18705,33188,34602,
#Partially deleted in new
chr1	6853094	6872045	chr1:6853094-6872045	0	+	6853094	6853094	8553170	2	95,289,	0,18662,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	6874055	6887842	chr1:6874055-6887842	0	+	6874055	6874055	8553170	3	368,107,189,	0,12184,13598,
#Partially deleted in new
chr1	7008375	7014279	chr1:7008375-7014279	3	-	7008375	7008375	8553170	2	320,29,	0,5875,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	7219359	7219524	chr1:7219359-7219524	3	+	7219359	7219359	8553170	1	165,	0,
#Partially deleted in new
chr1	7368941	7370270	chr1:7368941-7370270	3	+	7368941	7368941	8553170	2	175,190,	0,1139,
#Partially deleted in new
chr1	7382486	7389754	chr1:7382486-7389754	3	-	7382486	7382486	8553170	3	237,100,96,	0,6853,7172,
#Deleted in new
chr1	7388182	7389419	chr1:7388182-7389419	1	-	7388182	7388182	8553170	2	311,80,	0,1157,
#Deleted in new
chr1	7441095	7441554	chr1:7441095-7441554	3	-	7441095	7441095	8553170	2	86,275,	0,184,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	7693123	7694844	chr1:7693123-7694844	3	-	7693123	7693123	8553170	1	1721,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	7698302	7698872	chr1:7698302-7698872	3	-	7698302	7698302	8553170	1	570,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	7700703	7700970	chr1:7700703-7700970	3	-	7700703	7700703	8553170	1	267,	0,
#Partially deleted in new
chr1	7736407	7767856	chr1:7736407-7767856	0	+	7736407	7766522	789624	11	133,79,316,524,188,247,72,21,194,75,1398,	0,523,847,1551,8427,9437,11302,13363,14791,16051,30051,
#Partially deleted in new
chr1	7744913	7767856	chr1:7744913-7767856	0	+	7744913	7766522	789624	6	109,205,72,194,75,1398,	0,973,2796,6285,7545,21545,
#Partially deleted in new
chr1	7744960	7766522	chr1:7744960-7766522	1	+	7744960	7766522	789624	6	62,247,72,194,75,64,	0,884,2749,6238,7498,21498,
#Partially deleted in new
chr1	7771268	7781432	chr1:7771268-7781432	3	+	7771383	7779645	789624	5	117,70,159,52,1807,	0,2173,5891,6849,8357,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	7772706	7779806	chr1:7772706-7779806	1	+	7777171	7779645	789624	5	492,70,159,52,181,	0,735,4453,5411,6919,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	7776382	7776775	chr1:7776382-7776775	3	+	7776382	7776382	8553170	1	393,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	7777096	7778169	chr1:7777096-7778169	0	+	7777096	7777096	8553170	2	222,52,	0,1021,
#Partially deleted in new
chr1	7784319	7803958	chr1:7784319-7803958	1	+	7784877	7803852	789624	10	57,352,146,116,202,49,149,79,107,267,	0,334,1121,2401,3725,9640,14205,16793,18727,19372,
#Partially deleted in new
chr1	7784428	7845176	chr1:7784428-7845176	1	+	7784877	7842755	789624	22	40,352,146,116,202,52,149,79,107,157,106,129,151,136,125,174,231,698,328,184,151,2505,	0,225,1012,2292,3616,9528,14096,16684,18618,19263,24464,25464,26009,34856,35686,36038,42051,42689,45405,51333,52570,58243,
#Partially deleted in new
chr1	7784428	7845176	chr1:7784428-7845176	1	+	7784877	7842755	789624	23	40,352,146,116,202,52,149,79,107,157,106,129,151,136,125,174,231,698,115,156,184,151,2505,	0,225,1012,2292,3616,9528,14096,16684,18618,19263,24464,25464,26009,34856,35686,36038,42051,42689,45408,45577,51333,52570,58243,
#Partially deleted in new
chr1	7784653	7845177	chr1:7784653-7845177	1	+	7784877	7842755	789624	21	352,146,116,202,52,149,79,107,157,106,129,151,136,125,174,231,698,328,184,151,2506,	0,787,2067,3391,9303,13871,16459,18393,19038,24239,25239,25784,34631,35461,35813,41826,42464,45180,51108,52345,58018,
#Partially deleted in new
chr1	7784702	7845177	chr1:7784702-7845177	3	+	7784877	7842755	789624	21	303,146,116,202,49,149,79,107,157,106,129,130,136,125,174,231,698,325,184,151,2506,	0,738,2018,3342,9257,13822,16410,18344,18989,24190,25190,25735,34582,35412,35764,41777,42415,45134,51059,52296,57969,
#Partially deleted in new
chr1	7785522	7788338	chr1:7785522-7788338	0	+	7785522	7785522	8553170	4	64,116,49,294,	0,1198,1675,2522,
#Deleted in new
chr1	7787321	7788570	chr1:7787321-7788570	0	+	7787321	7787321	8553170	1	1249,	0,
#Partially deleted in new
chr1	7803050	7810347	chr1:7803050-7810347	0	+	7803050	7803050	8553170	3	103,157,455,	0,641,6842,
#Partially deleted in new
chr1	7836807	7842884	chr1:7836807-7842884	0	+	7836807	7836807	8553170	2	342,213,	0,5864,
#Partially deleted in new
chr1	7843082	7853512	chr1:7843082-7853512	1	-	7843942	7853003	789624	7	868,75,79,44,111,218,206,	0,3609,4721,6557,7729,9818,10224,
#Partially deleted in new
chr1	7847613	7853035	chr1:7847613-7853035	1	-	7847765	7853003	789624	4	269,44,111,135,	0,2026,3198,5287,
#Partially deleted in new
chr1	7847765	7853431	chr1:7847765-7853431	3	-	7847765	7853431	789624	5	117,44,111,23,125,	0,1874,3046,5135,5541,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	7915893	7943165	chr1:7915893-7943165	3	-	7920834	7939994	0	9	5030,135,131,67,138,108,184,150,27,	0,17268,19119,21796,22299,22827,24001,24890,27245,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	7919846	7940866	chr1:7919846-7940866	1	-	7920834	7939994	0	8	1077,135,131,67,138,108,184,83,	0,13315,15166,17843,18346,18874,20048,20937,
#Partially deleted in new
chr1	7921799	7935100	chr1:7921799-7935100	0	-	7921980	7935100	789624	3	222,135,88,	0,11362,13213,
#Partially deleted in new
chr1	7933126	7938304	chr1:7933126-7938304	0	-	7936514	7938304	789624	5	170,131,104,67,112,	0,1886,3333,4563,5066,
#Deleted in new
chr1	7942371	7942726	chr1:7942371-7942726	7	+	7942371	7942371	16724991	1	355,	0,
#Partially deleted in new
chr1	7954290	7985052	chr1:7954290-7985052	0	+	7962785	7985052	0	7	33,113,102,60,70,87,159,	0,8472,11033,15054,16603,23361,30603,
#Partially deleted in new
chr1	7961662	7985279	chr1:7961662-7985279	1	+	7962785	7985054	0	7	131,113,102,60,70,87,386,	0,1100,3661,7682,9231,15989,23231,
#Partially deleted in new
chr1	7961662	7971048	chr1:7961662-7971048	0	+	7961662	7961662	8553170	6	73,113,102,64,60,155,	0,1100,3661,7422,7682,9231,
#Partially deleted in new
chr1	7961691	7985505	chr1:7961691-7985505	3	+	7962785	7985054	0	7	44,113,102,60,70,87,612,	0,1071,3632,7653,9202,15960,23202,
#Partially deleted in new
chr1	7961700	7985281	chr1:7961700-7985281	1	+	7962785	7985054	789624	6	35,113,102,70,87,388,	0,1062,3623,9193,15951,23193,
#Partially deleted in new
chr1	7961747	7971521	chr1:7961747-7971521	0	+	7961747	7961747	8553170	5	46,113,102,60,628,	0,1015,3576,7597,9146,
#Partially deleted in new
chr1	7961893	7985250	chr1:7961893-7985250	1	+	7962785	7985054	0	7	188,113,102,60,70,87,357,	0,869,3430,7451,9000,15758,23000,
#Partially deleted in new
chr1	7961968	7985111	chr1:7961968-7985111	1	+	7962785	7985054	0	7	133,113,102,60,70,87,218,	0,794,3355,7376,8925,15683,22925,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	7962766	7971957	chr1:7962766-7971957	0	+	7962766	7962766	8553170	5	109,102,60,70,329,	0,2557,6578,8127,8862,
#Partially deleted in new
chr1	7965350	7985282	chr1:7965350-7985282	0	+	7965350	7985054	789624	5	75,60,70,87,419,	0,3994,5543,12301,19513,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	7982880	7982983	chr1:7982880-7982983	3	-	7982880	7982880	8553170	1	103,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	7998186	7999934	chr1:7998186-7999934	3	-	7998186	7998186	8553170	2	181,862,	0,886,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	7999539	8002961	chr1:7999539-8002961	1	+	7999539	7999539	8553170	2	1189,1047,	0,2375,
#Partially deleted in new
chr1	8004403	8026283	chr1:8004403-8026283	1	-	8004521	8015619	789624	3	155,198,126,	0,11091,21754,
#Partially deleted in new
chr1	8011718	8026308	chr1:8011718-8026308	3	-	8013209	8015619	0	4	2678,77,198,151,	0,3589,3776,14439,
#Deleted in new
chr1	8013426	8015633	chr1:8013426-8015633	1	-	8015269	8015619	789624	2	1958,139,	0,2068,
#Partially deleted in new
chr1	8013738	8026296	chr1:8013738-8026296	1	-	8014296	8015619	789624	3	658,198,139,	0,1756,12419,
#Partially deleted in new
chr1	8014039	8026296	chr1:8014039-8026296	0	-	8015366	8015619	789624	4	357,93,198,139,	0,1268,1455,12118,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	8026737	8122702	chr1:8026737-8122702	3	+	8026737	8026737	8553170	3	684,131,1229,	0,2489,94736,
#Partially deleted in new
chr1	8057244	8058463	chr1:8057244-8058463	7	-	8057244	8057244	16724991	2	697,103,	0,1116,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	8189823	8192770	chr1:8189823-8192770	7	+	8189823	8189823	16724991	4	508,280,73,214,	0,1392,2358,2733,
#Partially deleted in new
chr1	8202428	8215210	chr1:8202428-8215210	3	+	8202428	8202428	8553170	4	448,207,109,132,	0,6238,8058,12650,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	8206433	8206597	chr1:8206433-8206597	3	-	8206433	8206433	8553170	1	164,	0,
#Partially deleted in new
chr1	8208671	8215210	chr1:8208671-8215210	0	+	8208671	8208671	789624	4	202,109,54,132,	0,1815,5953,6407,
#Partially deleted in new
chr1	8218189	8220529	chr1:8218189-8220529	3	-	8218189	8218189	8553170	2	344,133,	0,2207,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	8292156	8292263	chr1:8292156-8292263	3	-	8292156	8292156	8553170	1	107,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	8317825	8344165	chr1:8317825-8344165	3	+	8318108	8344013	789624	9	361,421,93,225,728,154,177,206,419,	0,6480,7472,7992,12383,17611,19990,21667,25921,
#Partially deleted in new
chr1	8324329	8344167	chr1:8324329-8344167	1	+	8324329	8344013	789624	8	397,93,225,728,154,177,206,421,	0,968,1488,5879,11107,13486,15163,19417,
#Partially deleted in new
chr1	8330137	8344157	chr1:8330137-8344157	0	+	8330137	8330137	8553170	5	799,154,177,206,411,	0,5299,7678,9355,13609,
#Partially deleted in new
chr1	8330427	8336109	chr1:8330427-8336109	0	+	8330427	8330427	8553170	3	509,154,31,	0,5009,5651,
#Partially deleted in new
chr1	8352396	8817465	chr1:8352396-8817465	3	-	8355086	8656297	0	24	2724,181,147,721,223,1379,114,162,200,93,163,81,99,100,125,49,105,97,106,126,71,469,185,306,	0,3022,3703,5799,7367,7715,9366,10286,11659,12349,13415,70330,113528,142666,145008,156230,188817,204078,205021,262164,271913,303576,440007,464763,
#Partially deleted in new
chr1	8352405	8525939	chr1:8352405-8525939	1	-	8355086	8525784	789624	17	2715,181,147,721,223,1379,114,162,200,93,163,81,99,100,125,49,181,	0,3013,3694,5790,7358,7706,9357,10277,11650,12340,13406,70321,113519,142657,144999,156221,173353,
#Deleted in new
chr1	8352908	8355082	chr1:8352908-8355082	0	-	8352908	8352908	8553170	2	270,140,	0,2034,
#Partially deleted in new
chr1	8353942	8656371	chr1:8353942-8656371	1	-	8355086	8656297	789624	15	1178,181,93,163,81,99,100,125,49,105,97,106,126,71,399,	0,1476,10803,11869,68784,111982,141120,143462,154684,187271,202532,203475,260618,270367,302030,
#Partially deleted in new
chr1	8354092	8423666	chr1:8354092-8423666	1	-	8355086	8364133	0	13	1028,181,147,721,223,1379,114,162,200,93,163,81,106,	0,1326,2007,4103,5671,6019,7670,8590,9963,10653,11719,68634,69468,
#Partially deleted in new
chr1	8354625	8817643	chr1:8354625-8817643	1	-	8355086	8656297	0	23	495,181,147,721,223,1379,114,162,200,93,163,81,99,100,125,49,105,97,106,126,71,469,484,	0,793,1474,3570,5138,5486,7137,8057,9430,10120,11186,68101,111299,140437,142779,154001,186588,201849,202792,259935,269684,301347,462534,
#Deleted in new
chr1	8355520	8362844	chr1:8355520-8362844	0	-	8355520	8362844	789624	5	79,147,31,114,162,	0,579,5939,6242,7162,
#Deleted in new
chr1	8363709	8364838	chr1:8363709-8364838	0	-	8363709	8364838	789624	2	546,93,	0,1036,
#Partially deleted in new
chr1	8364055	8425212	chr1:8364055-8425212	0	-	8364055	8364133	789624	5	200,93,163,81,425,	0,690,1756,58671,60732,
#Partially deleted in new
chr1	8365854	8423419	chr1:8365854-8423419	0	-	8365854	8365854	8553170	3	120,81,253,	0,56872,57312,
#Partially deleted in new
chr1	8365875	8423666	chr1:8365875-8423666	0	-	8365875	8365875	8553170	4	99,81,81,106,	0,56851,57291,57685,
#Partially deleted in new
chr1	8365879	8424234	chr1:8365879-8424234	0	-	8365879	8365879	8553170	3	95,81,220,	0,56847,58135,
#Partially deleted in new
chr1	8422789	8526027	chr1:8422789-8526027	0	-	8422789	8497454	789624	7	18,99,100,125,49,83,269,	0,43135,72273,74615,85837,96920,102969,
#Partially deleted in new
chr1	8424644	8434838	chr1:8424644-8434838	3	+	8424644	8424644	789624	4	57,107,146,206,	0,3837,5182,9988,
#Partially deleted in new
chr1	8425637	8430041	chr1:8425637-8430041	1	+	8425637	8425637	8553170	3	117,107,215,	0,2844,4189,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	8464969	8753838	chr1:8464969-8753838	0	-	8464969	8464969	8553170	11	1054,100,125,49,105,97,106,126,71,469,408,	0,30093,32435,43657,76244,91505,92448,149591,159340,191003,288461,
#Partially deleted in new
chr1	8495150	8526039	chr1:8495150-8526039	0	-	8495150	8495150	8553170	3	12,125,281,	0,2254,30608,
#Deleted in new
chr1	8511794	8511919	chr1:8511794-8511919	3	-	8511794	8511794	8553170	1	125,	0,
#Partially deleted in new
chr1	8512652	8513021	chr1:8512652-8513021	7	+	8512652	8512652	16724991	1	369,	0,
#Partially deleted in new
chr1	8541223	8590841	chr1:8541223-8590841	0	-	8541223	8541223	8553170	4	95,97,106,57,	0,15251,16194,49561,
#Partially deleted in new
chr1	8556475	8624380	chr1:8556475-8624380	0	-	8556475	8624380	789624	3	96,106,71,	0,942,67834,
#Partially deleted in new
chr1	8656192	8703219	chr1:8656192-8703219	0	-	8656192	8656297	789624	2	249,165,	0,46862,
#Deleted in new
chr1	8750429	8751087	chr1:8750429-8751087	7	+	8750429	8750429	16724991	1	658,	0,
#Partially deleted in new
chr1	8786210	8786913	chr1:8786210-8786913	7	-	8786210	8786210	16724991	1	703,	0,
#Deleted in new
chr1	8796570	8796673	chr1:8796570-8796673	3	-	8796570	8796570	8553170	1	103,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	8798474	8799506	chr1:8798474-8799506	7	+	8798474	8798474	16724991	2	217,198,	0,834,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	8831006	8831375	chr1:8831006-8831375	7	+	8831006	8831006	16724991	1	369,	0,
#Partially deleted in new
chr1	8860999	8878686	chr1:8860999-8878686	1	-	8861359	8874908	0	12	430,59,109,202,198,223,134,70,59,96,94,107,	0,1887,2235,2891,4285,5279,6117,6988,9452,10891,13824,17580,
#Partially deleted in new
chr1	8860999	8879250	chr1:8860999-8879250	3	-	8861359	8874908	0	12	430,59,109,202,198,223,134,70,59,96,94,671,	0,1887,2235,2891,4285,5279,6117,6988,9452,10891,13824,17580,
#Partially deleted in new
chr1	8861001	8871576	chr1:8861001-8871576	0	-	8861001	8861001	8553170	9	428,59,109,202,198,223,134,70,1125,	0,1885,2233,2889,4283,5277,6115,6986,9450,
#Partially deleted in new
chr1	8861001	8878689	chr1:8861001-8878689	1	-	8861359	8874908	789624	12	428,59,109,202,198,223,134,70,59,96,94,110,	0,1885,2233,2889,4283,5277,6115,6986,9823,10889,13822,17578,
#Partially deleted in new
chr1	8861006	8878690	chr1:8861006-8878690	0	-	8868050	8874908	789624	13	423,59,109,202,198,223,134,70,59,59,96,94,111,	0,1880,2228,2884,4278,5272,6110,6981,9445,9818,10884,13817,17573,
#Partially deleted in new
chr1	8863113	8879092	chr1:8863113-8879092	0	-	8863113	8863113	8553170	10	230,202,198,223,134,70,59,96,94,513,	0,777,2171,3165,4003,4874,7338,8777,11710,15466,
#Partially deleted in new
chr1	8866360	8878267	chr1:8866360-8878267	0	-	8866360	8874908	789624	7	141,134,70,59,96,94,53,	0,756,1627,4091,5530,8463,11854,
#Partially deleted in new
chr1	8866431	8878032	chr1:8866431-8878032	0	-	8866431	8874908	789624	7	70,134,70,59,96,91,61,	0,685,1556,4020,5459,8392,11540,
#Partially deleted in new
chr1	8866479	8878720	chr1:8866479-8878720	0	-	8868025	8874908	789624	6	22,134,70,96,94,141,	0,637,1508,5411,8344,12100,
#Deleted in new
chr1	8866501	8866590	chr1:8866501-8866590	3	-	8866501	8866501	5263520	1	89,	0,
#Partially deleted in new
chr1	8867183	8878033	chr1:8867183-8878033	0	-	8867183	8874908	789624	7	67,70,59,96,94,104,58,	0,804,3268,4707,7640,9015,10792,
#Partially deleted in new
chr1	8868026	8878720	chr1:8868026-8878720	0	-	8868026	8871900	789624	6	31,59,96,201,94,141,	0,2425,3864,5746,6797,10553,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	8868047	8878646	chr1:8868047-8878646	0	-	8868047	8874908	789624	6	10,59,96,94,243,67,	0,2404,3843,6776,7741,10532,
#Partially deleted in new
chr1	8868048	8879190	chr1:8868048-8879190	0	-	8868048	8874908	789624	5	9,59,96,94,379,	0,2403,3842,6775,10763,
#Partially deleted in new
chr1	8870171	8878688	chr1:8870171-8878688	0	-	8870171	8870171	8553170	4	237,96,94,109,	0,1719,4652,8408,
#Partially deleted in new
chr1	8870946	8878692	chr1:8870946-8878692	0	-	8870946	8870946	8553170	3	1040,94,113,	0,3877,7633,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	8875787	8878007	chr1:8875787-8878007	0	-	8875787	8875787	8553170	2	244,500,	0,1720,
#Deleted in new
chr1	8878834	8879894	chr1:8878834-8879894	3	+	8878834	8878834	789624	2	126,330,	0,730,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	8883426	8883533	chr1:8883426-8883533	3	-	8883426	8883426	8553170	1	107,	0,
#Partially deleted in new
chr1	8893408	8894151	chr1:8893408-8894151	7	+	8893408	8893408	16724991	1	743,	0,
#Deleted in new
chr1	8907392	8907744	chr1:8907392-8907744	7	-	8907392	8907392	16724991	1	352,	0,
#Deleted in new
chr1	8909741	8909904	chr1:8909741-8909904	7	+	8909741	8909741	16724991	1	163,	0,
#Partially deleted in new
chr1	8945866	8967745	chr1:8945866-8967745	0	+	8945886	8967745	789624	6	99,89,144,93,70,87,	0,3396,11275,13043,16720,21792,
#Partially deleted in new
chr1	8945867	8974874	chr1:8945867-8974874	0	+	8945867	8945867	8553170	6	98,93,70,158,115,253,	0,13042,16719,21791,24999,28754,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	8945881	8952651	chr1:8945881-8952651	1	+	8945886	8951703	789624	3	84,180,1229,	0,3381,5541,
#Partially deleted in new
chr1	8945882	8975092	chr1:8945882-8975092	3	+	8945886	8974704	0	8	83,180,149,93,70,158,115,471,	0,3380,11254,13027,16704,21776,24984,28739,
#Partially deleted in new
chr1	8945886	8974444	chr1:8945886-8974444	1	+	8945886	8974444	0	8	79,180,149,93,70,158,115,98,	0,3376,11250,13023,16700,21772,24980,28460,
#Partially deleted in new
chr1	8945886	8974704	chr1:8945886-8974704	1	+	8945886	8974704	0	7	79,149,93,70,158,115,83,	0,11250,13023,16700,21772,24980,28735,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	8979575	8979874	chr1:8979575-8979874	3	-	8979575	8979575	8553170	1	299,	0,
#Partially deleted in new
chr1	9003299	9026345	chr1:9003299-9026345	3	-	9003299	9026345	0	12	219,128,76,102,111,188,126,153,125,161,99,51,	0,1452,4010,6843,10225,11381,11817,14923,15909,19618,21676,22995,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	9035106	9069716	chr1:9035106-9069716	3	-	9037585	9069536	0	12	2683,128,76,102,111,188,126,153,125,161,99,213,	0,2790,3324,3721,4445,4693,4957,6678,12503,22341,23045,34397,
#Deleted in new
chr1	9038430	9039895	chr1:9038430-9039895	0	-	9038430	9038430	8553170	3	76,102,344,	0,397,1121,
#Partially deleted in new
chr1	9040079	9069604	chr1:9040079-9069604	1	-	9041620	9069536	0	5	1858,125,161,99,101,	0,7530,17368,18072,29424,
#Partially deleted in new
chr1	9041784	9072265	chr1:9041784-9072265	0	-	9041784	9069536	789624	6	153,125,161,99,91,217,	0,5825,15663,16367,27719,30264,
#Partially deleted in new
chr1	9041784	9071727	chr1:9041784-9071727	0	-	9041784	9069536	789624	6	153,125,161,99,91,55,	0,5825,15663,16367,27719,29888,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	9041784	9088478	chr1:9041784-9088478	0	-	9041784	9069536	789624	7	153,125,161,99,91,153,107,	0,5825,15663,16367,27719,43229,46587,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	9041857	9088457	chr1:9041857-9088457	0	-	9041857	9069536	789624	7	80,125,161,99,91,113,86,	0,5752,15590,16294,27646,43156,46514,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	9047610	9088443	chr1:9047610-9088443	0	-	9047610	9069536	789624	6	124,161,99,91,129,72,	0,9837,10541,21893,37403,40761,
#Partially deleted in new
chr1	9057497	9069851	chr1:9057497-9069851	0	-	9057497	9069536	789624	4	111,99,91,154,	0,654,12006,12200,
#Deleted in new
chr1	9082695	9082879	chr1:9082695-9082879	3	+	9082695	9082695	8553170	1	184,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	9100304	9129170	chr1:9100304-9129170	3	-	9104418	9129027	789624	4	4330,195,214,526,	0,5181,10971,28340,
#Partially deleted in new
chr1	9104531	9111370	chr1:9104531-9111370	0	-	9104531	9111370	789624	2	103,95,	0,6744,
#Partially deleted in new
chr1	9111168	9128781	chr1:9111168-9128781	0	-	9111168	9111168	8553170	2	321,137,	0,17476,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	9148010	9182392	chr1:9148010-9182392	3	-	9148010	9148010	789624	2	3825,386,	0,33996,
#Deleted in new
chr1	9151667	9151777	chr1:9151667-9151777	3	-	9151667	9151667	789624	1	110,	0,
#Partially deleted in new
chr1	9179630	9198703	chr1:9179630-9198703	1	-	9179630	9179630	8553170	2	2665,1792,	0,17281,
#Partially deleted in new
chr1	9182003	9196284	chr1:9182003-9196284	3	+	9182003	9182003	8553170	3	313,175,400,	0,1629,13881,
#Deleted in new
chr1	9182006	9183750	chr1:9182006-9183750	0	-	9182006	9182006	8553170	2	289,120,	0,1624,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	9182203	9192089	chr1:9182203-9192089	1	+	9182203	9182203	789624	3	113,175,697,	0,1429,9189,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	9191047	9191967	chr1:9191047-9191967	0	+	9191047	9191047	8553170	2	77,575,	0,345,
#Deleted in new
chr1	9197142	9198906	chr1:9197142-9198906	0	-	9197142	9197142	8553170	1	1764,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	9234774	9271337	chr1:9234774-9271337	3	+	9244934	9264869	789624	5	292,637,118,270,7829,	0,10150,12191,27284,28734,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	9239843	9267898	chr1:9239843-9267898	1	+	9239995	9264869	789624	5	175,637,118,270,4390,	0,5081,7122,22215,23665,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	9265529	9271337	chr1:9265529-9271337	0	+	9265529	9265529	8553170	2	2508,193,	0,5615,
#Partially deleted in new
chr1	9292879	9369532	chr1:9292879-9369532	3	+	9355891	9367575	0	3	192,843,2085,	0,62863,74568,
#Partially deleted in new
chr1	9294527	9356497	chr1:9294527-9356497	0	+	9355891	9356497	789624	2	67,755,	0,61215,
#Partially deleted in new
chr1	9351430	9367863	chr1:9351430-9367863	1	+	9355891	9367575	0	3	180,843,416,	0,4312,16017,
#Partially deleted in new
chr1	9355706	9367575	chr1:9355706-9367575	1	+	9355891	9367575	0	2	879,128,	0,11741,
#Deleted in new
chr1	9421097	9422862	chr1:9421097-9422862	3	-	9421097	9421097	8553170	1	1765,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	9425093	9429075	chr1:9425093-9429075	3	-	9425093	9425093	789624	2	2288,154,	0,3828,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	9426648	9440564	chr1:9426648-9440564	0	-	9426648	9426648	8553170	2	733,106,	0,13810,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	9426974	9428916	chr1:9426974-9428916	0	-	9426974	9426974	8553170	2	407,75,	0,1867,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	9437668	9437778	chr1:9437668-9437778	7	-	9437668	9437668	16724991	1	110,	0,
#Partially deleted in new
chr1	9501091	9503471	chr1:9501091-9503471	3	-	9501091	9501091	8553170	2	457,251,	0,2129,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	9539481	9585179	chr1:9539481-9585179	3	+	9539691	9582501	789624	7	266,180,78,101,67,281,2881,	0,14144,27802,30776,33864,40472,42817,
#Deleted in new
chr1	9576426	9576985	chr1:9576426-9576985	7	+	9576426	9576426	16724991	1	559,	0,
#Partially deleted in new
chr1	9588921	9604954	chr1:9588921-9604954	3	+	9588930	9602291	789624	6	122,121,195,177,350,2886,	0,6968,7937,9527,12183,13147,
#Partially deleted in new
chr1	9588921	9614849	chr1:9588921-9614849	1	+	9588930	9613083	789624	11	122,121,195,177,350,204,233,72,300,138,1864,	0,6968,7937,9527,12183,13147,18635,20918,21584,22831,24064,
#Partially deleted in new
chr1	9596896	9614873	chr1:9596896-9614873	0	+	9596896	9613083	789624	8	157,177,350,204,233,300,138,1888,	0,1552,4208,5172,10660,13609,14856,16089,
#Deleted in new
chr1	9606213	9607685	chr1:9606213-9607685	0	+	9606213	9606213	8553170	2	425,129,	0,1343,
#Partially deleted in new
chr1	9607727	9613247	chr1:9607727-9613247	0	+	9607727	9611758	789624	6	62,72,300,59,138,262,	0,2112,2778,3287,4025,5258,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr1	9651731	9729114	chr1:9651731-9729114	1	+	9710455	9727046	789624	25	71,105,173,229,230,180,45,90,222,97,131,228,168,18,104,144,100,179,113,79,168,124,146,133,2206,	0,39735,58692,63809,64117,64708,65332,65805,66962,68189,68380,68702,69010,69394,69413,69712,70029,70243,70512,70796,71393,72237,72544,73072,75177,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr1	9651731	9729114	chr1:9651731-9729114	1	+	9710455	9727046	789624	24	71,105,173,229,230,180,45,90,222,97,131,228,168,122,144,100,179,113,79,168,124,146,133,2206,	0,39735,58692,63809,64117,64708,65332,65805,66962,68189,68380,68702,69010,69395,69712,70029,70243,70512,70796,71393,72237,72544,73072,75177,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr1	9651744	9728919	chr1:9651744-9728919	3	+	9710455	9727046	0	24	58,105,173,229,230,180,150,90,222,97,131,51,168,122,144,100,179,113,79,168,124,146,133,2011,	0,39722,58679,63796,64104,64695,65214,65792,66949,68176,68367,68866,68997,69382,69699,70016,70230,70499,70783,71380,72224,72531,73059,75164,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	9652609	9654586	chr1:9652609-9654586	3	-	9652609	9652609	789624	2	1434,389,	0,1588,
#Partially deleted in new
chr1	9660827	9662626	chr1:9660827-9662626	7	-	9660827	9660827	16724991	2	91,330,	0,1469,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	9672425	9687555	chr1:9672425-9687555	3	-	9672425	9672425	789624	3	294,424,221,	0,8286,14909,
#Partially deleted in new
chr1	9688175	9691946	chr1:9688175-9691946	0	+	9688175	9688175	8553170	3	138,105,272,	0,3291,3499,
#Partially deleted in new
chr1	9710197	9727232	chr1:9710197-9727232	1	+	9710455	9727046	789624	23	83,173,229,230,180,45,90,222,97,131,228,168,122,144,100,179,113,79,168,124,146,133,324,	0,226,5343,5651,6242,6866,7339,8496,9723,9914,10236,10544,10929,11246,11563,11777,12046,12330,12927,13771,14078,14606,16711,
#Partially deleted in new
chr1	9710197	9727227	chr1:9710197-9727227	1	+	9710455	9727046	789624	24	83,173,229,230,180,45,90,222,97,131,228,167,19,104,144,100,179,113,79,168,124,146,133,319,	0,226,5343,5651,6242,6866,7339,8496,9723,9914,10236,10544,10927,10947,11246,11563,11777,12046,12330,12927,13771,14078,14606,16711,
#Deleted in new
chr1	9715698	9716163	chr1:9715698-9716163	0	+	9715698	9715698	8553170	2	71,315,	0,150,
#Deleted in new
chr1	9716275	9717581	chr1:9716275-9717581	0	+	9716275	9716275	8553170	3	344,150,45,	0,683,1261,
#Partially deleted in new
chr1	9729025	9824526	chr1:9729025-9824526	1	-	9730507	9823733	789624	19	1680,185,136,146,171,227,149,158,57,163,122,249,186,150,209,196,30,123,884,	0,2180,2735,4375,4946,5922,6441,6859,8472,12068,14858,15369,20435,20738,22447,26088,27455,44246,94617,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	9729026	9823669	chr1:9729026-9823669	0	-	9744537	9823669	8553170	19	1679,185,136,146,171,227,149,158,57,163,122,249,124,186,150,209,196,123,27,	0,2179,2734,4374,4945,5921,6440,6858,8471,12067,14857,15368,17862,20434,20737,22446,26087,44245,94616,
#Partially deleted in new
chr1	9729027	9823984	chr1:9729027-9823984	3	-	9730507	9823733	789624	18	1678,185,136,146,171,227,149,158,57,163,122,249,186,150,209,196,123,342,	0,2178,2733,4373,4944,5920,6439,6857,8470,12066,14856,15367,20433,20736,22445,26086,44244,94615,
#Partially deleted in new
chr1	9729027	9751581	chr1:9729027-9751581	0	-	9730507	9751581	789624	14	1678,185,136,146,171,227,149,158,163,122,249,186,150,109,	0,2178,2733,4373,4944,5920,6439,6857,12066,14856,15367,20433,20736,22445,
#Partially deleted in new
chr1	9729027	9733486	chr1:9729027-9733486	0	-	9729027	9729027	8553170	4	1678,269,136,86,	0,2094,2733,4373,
#Deleted in new
chr1	9749487	9750167	chr1:9749487-9750167	0	-	9749487	9749487	8553170	2	159,404,	0,276,
#Partially deleted in new
chr1	9780821	9781240	chr1:9780821-9781240	7	+	9780821	9780821	16724991	2	79,167,	0,252,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	9826288	9828271	chr1:9826288-9828271	3	-	9826288	9826288	8553170	1	1983,	0,
#Deleted in new
chr1	9827609	9828258	chr1:9827609-9828258	0	-	9827609	9827609	8553170	1	649,	0,
#Partially deleted in new
chr1	9848275	9910263	chr1:9848275-9910263	3	-	9850717	9872064	0	6	2501,91,120,85,34,169,	0,22911,23693,29629,35429,61819,
#Deleted in new
chr1	9848317	9850154	chr1:9848317-9850154	3	+	9848317	9848317	8553170	3	149,106,169,	0,1051,1668,
#Partially deleted in new
chr1	9850108	9910336	chr1:9850108-9910336	1	-	9850717	9872064	0	5	668,91,120,85,242,	0,21078,21860,27796,59986,
#Partially deleted in new
chr1	9850449	9893237	chr1:9850449-9893237	1	-	9850717	9872064	0	5	327,91,120,85,229,	0,20737,21519,27455,42559,
#Partially deleted in new
chr1	9850658	9878176	chr1:9850658-9878176	1	-	9850717	9872064	0	5	118,91,120,85,37,	0,20528,21310,27246,27481,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	9900613	9908034	chr1:9900613-9908034	3	+	9900613	9900613	8553170	3	378,106,278,	0,3686,7143,
#Partially deleted in new
chr1	9922112	9935620	chr1:9922112-9935620	0	-	9922254	9935620	789624	5	246,82,96,99,129,	0,9778,10690,12649,13379,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	9928938	9943329	chr1:9928938-9943329	3	-	9930398	9936619	789624	8	1519,82,96,99,136,109,159,81,	0,2952,3864,5823,6553,7580,13685,14310,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	9929719	9942768	chr1:9929719-9942768	1	-	9930398	9936619	789624	7	738,82,96,99,136,109,145,	0,2171,3083,5042,5772,6799,12904,
#Partially deleted in new
chr1	9930252	9943407	chr1:9930252-9943407	1	-	9930398	9936619	789624	8	205,82,96,99,136,109,159,59,	0,1638,2550,4509,5239,6266,12371,13096,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	9930260	9932180	chr1:9930260-9932180	0	-	9930260	9930260	8553170	2	197,290,	0,1630,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	9942922	9949974	chr1:9942922-9949974	3	+	9942922	9942922	8553170	2	103,337,	0,6715,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	9943427	9985498	chr1:9943427-9985498	3	+	9972073	9982701	0	5	88,171,184,140,3198,	0,28590,32164,37603,38873,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	9943427	9981766	chr1:9943427-9981766	1	+	9972073	9981299	789624	5	88,171,184,140,511,	0,28590,32164,37603,37828,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	9943428	9983669	chr1:9943428-9983669	0	+	9972073	9982701	0	6	87,171,184,140,570,666,	0,28589,32163,37602,38872,39575,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	9943487	9972503	chr1:9943487-9972503	0	+	9943487	9943487	8553170	2	28,486,	0,28530,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	9947317	9947636	chr1:9947317-9947636	3	+	9947317	9947317	8553170	1	319,	0,
#Partially deleted in new
chr1	9950571	9960787	chr1:9950571-9960787	7	-	9950571	9950571	16724991	5	77,67,131,95,74,	0,659,1767,5249,10142,
#Partially deleted in new
chr1	9967380	9967458	chr1:9967380-9967458	3	+	9967380	9967380	5263520	1	78,	0,
#Partially deleted in new
chr1	9981051	9985501	chr1:9981051-9985501	0	+	9981051	9985143	789624	2	119,366,	0,4084,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	9983140	9984568	chr1:9983140-9984568	3	+	9983140	9983140	8553170	2	150,286,	0,1142,
#Partially deleted in new
chr1	9997215	10016020	chr1:9997215-10016020	3	+	9997258	10015832	0	4	116,179,102,239,	0,10354,10957,18566,
#Partially deleted in new
chr1	10032831	10180367	chr1:10032831-10180367	3	+	10033670	10179956	0	27	863,187,136,88,145,229,142,101,115,84,57,117,99,114,199,139,100,128,99,236,127,145,135,192,175,147,473,	0,39196,62629,68276,70116,72684,84627,86681,89130,93962,96560,97668,97883,99537,102156,104235,112108,114131,116352,118494,125524,128310,135304,138306,145812,146584,147063,
#Partially deleted in new
chr1	10033273	10073118	chr1:10033273-10073118	1	+	10033670	10072545	789624	3	421,187,665,	0,38754,39180,
#Partially deleted in new
chr1	10033595	10181239	chr1:10033595-10181239	1	+	10033670	10179956	0	28	99,187,136,88,145,229,387,142,101,115,84,57,117,99,114,199,139,100,128,99,236,127,145,135,192,175,147,1345,	0,38432,61865,67512,69352,71920,72601,83863,85917,88366,93198,95796,96904,97119,98773,101392,103471,111344,113367,115588,117730,124760,127546,134540,137542,145048,145820,146299,
#Deleted in new
chr1	10054444	10054781	chr1:10054444-10054781	7	-	10054444	10054444	16724991	1	337,	0,
#Partially deleted in new
chr1	10058670	10059648	chr1:10058670-10059648	7	+	10058670	10058670	16724991	2	273,407,	0,571,
#Partially deleted in new
chr1	10100860	10103185	chr1:10100860-10103185	0	+	10100860	10100860	8553170	2	335,238,	0,2087,
#Partially deleted in new
chr1	10107330	10132480	chr1:10107330-10132480	0	+	10107330	10107330	8553170	9	44,142,101,115,84,57,117,99,112,	0,10128,12182,14631,19463,22061,23169,23384,25038,
#Partially deleted in new
chr1	10122041	10145039	chr1:10122041-10145039	0	+	10122041	10145039	789624	8	35,84,57,99,114,199,139,100,	0,4752,7350,8673,10327,12946,15025,22898,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	10128338	10145599	chr1:10128338-10145599	0	+	10128338	10128338	8553170	6	1110,117,99,114,199,660,	0,2161,2376,4030,6649,16601,
#Partially deleted in new
chr1	10158353	10171189	chr1:10158353-10171189	0	+	10158353	10166264	789624	5	129,145,99,135,52,	0,2788,7890,9782,12784,
#Deleted in new
chr1	10163267	10163374	chr1:10163267-10163374	3	+	10163267	10163267	8553170	1	107,	0,
#Partially deleted in new
chr1	10170955	10180016	chr1:10170955-10180016	0	+	10170955	10170955	8553170	4	374,175,147,122,	0,7688,8460,8939,
#Deleted in new
chr1	10179015	10179950	chr1:10179015-10179950	0	+	10179015	10179015	8553170	3	152,147,56,	0,400,879,
#Boundary problem: need 47, got 0, diff 47, mapped 0.0
chr1	10210804	10377937	chr1:10210804-10377937	1	+	10232328	10376587	0	47	74,185,77,180,66,179,112,78,66,76,79,143,134,80,76,80,107,84,181,73,94,149,179,138,249,119,86,130,163,91,119,56,109,67,85,106,115,134,62,146,240,72,122,150,193,119,1393,	0,21445,45442,47688,51100,56575,57347,60697,61436,64623,65516,67181,71595,80277,81242,84281,84855,85777,86092,86369,109238,110904,113079,113953,115306,123715,125852,126269,126566,128964,131245,132427,135040,136956,137844,141826,150124,150887,152478,154295,154604,157662,160336,163511,164049,164450,165740,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr1	10210804	10308597	chr1:10210804-10308597	1	+	10232328	10304647	0	21	74,185,77,180,66,179,112,78,66,76,79,143,134,80,76,80,107,84,181,73,5435,	0,21445,45442,47688,51100,56575,57347,60697,61436,64623,65516,67181,71595,80277,81242,84281,84855,85777,86092,86369,92358,
#Duplicated in new
chr1	10211615	10381603	chr1:10211615-10381603	3	+	10232328	10376587	0	49	123,185,77,180,66,179,112,78,66,18,76,79,143,42,212,80,76,80,107,84,181,73,94,149,179,138,249,119,86,130,163,91,119,56,109,67,85,106,115,134,62,146,240,72,122,150,193,119,5059,	0,20634,44631,46877,50289,55764,56536,59886,60625,61398,63812,64705,66370,67481,70706,79466,80431,83470,84044,84966,85281,85558,108427,110093,112268,113142,114495,122904,125041,125458,125755,128153,130434,131616,134229,136145,137033,141015,149313,150076,151667,153484,153793,156851,159525,162700,163238,163639,164929,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr1	10230763	10306757	chr1:10230763-10306757	1	+	10232328	10304647	0	21	234,185,77,180,66,179,112,78,66,76,79,143,134,80,76,80,107,84,181,73,3595,	0,1486,25483,27729,31141,36616,37388,40738,41477,44664,45557,47222,51636,60318,61283,64322,64896,65818,66133,66410,72399,
#Boundary problem: need 48, got 0, diff 48, mapped 0.0
chr1	10232249	10381597	chr1:10232249-10381597	1	+	10232328	10378402	0	48	185,77,180,66,179,112,78,66,18,76,79,143,42,212,80,76,80,107,84,181,73,94,149,179,138,249,119,86,130,163,91,119,56,109,67,85,106,115,134,62,146,240,72,122,150,193,119,3259,	0,23997,26243,29655,35130,35902,39252,39991,40764,43178,44071,45736,46847,50072,58832,59797,62836,63410,64332,64647,64924,87793,89459,91634,92508,93861,102270,104407,104824,105121,107519,109800,110982,113595,115511,116399,120381,128679,129442,131033,132850,133159,136217,138891,142066,142604,143005,146089,
#Boundary problem: need 47, got 0, diff 47, mapped 0.0
chr1	10232328	10381596	chr1:10232328-10381596	1	+	10232328	10378402	789624	47	106,77,180,66,179,112,78,66,18,76,79,143,212,80,76,80,107,84,181,73,94,149,179,138,249,119,86,130,163,91,119,56,109,67,85,106,115,134,62,146,240,72,122,150,193,119,3258,	0,23918,26164,29576,35051,35823,39173,39912,40685,43099,43992,45657,49993,58753,59718,62757,63331,64253,64568,64845,87714,89380,91555,92429,93782,102191,104328,104745,105042,107440,109721,110903,113516,115432,116320,120302,128600,129363,130954,132771,133080,136138,138812,141987,142525,142926,146010,
#Boundary problem: need 48, got 0, diff 48, mapped 0.0
chr1	10232328	10381596	chr1:10232328-10381596	1	+	10232328	10378402	789624	48	106,77,180,66,179,112,78,66,18,76,79,143,42,134,80,76,80,107,84,181,73,94,149,179,138,249,119,86,130,163,91,119,56,109,67,85,106,115,134,62,146,240,72,122,150,193,119,3258,	0,23918,26164,29576,35051,35823,39173,39912,40685,43099,43992,45657,46768,50071,58753,59718,62757,63331,64253,64568,64845,87714,89380,91555,92429,93782,102191,104328,104745,105042,107440,109721,110903,113516,115432,116320,120302,128600,129363,130954,132771,133080,136138,138812,141987,142525,142926,146010,
#Partially deleted in new
chr1	10278557	10282383	chr1:10278557-10282383	0	+	10278557	10278557	8553170	2	581,62,	0,3764,
#Partially deleted in new
chr1	10282449	10292334	chr1:10282449-10292334	0	+	10282449	10282449	8553170	3	84,80,288,	0,8632,9597,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	10298965	10299072	chr1:10298965-10299072	3	+	10298965	10298965	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	10306464	10306757	chr1:10306464-10306757	3	+	10306464	10306464	8553170	1	293,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	10344774	10361825	chr1:10344774-10361825	0	+	10344774	10344774	8553170	7	143,109,67,85,106,115,134,	0,1070,2986,3874,7856,16154,16917,
#Partially deleted in new
chr1	10345620	10361824	chr1:10345620-10361824	0	+	10345620	10345620	8553170	6	333,67,85,106,115,133,	0,2140,3028,7010,15308,16071,
#Partially deleted in new
chr1	10352663	10377189	chr1:10352663-10377189	0	+	10352663	10376587	789624	13	73,27,115,134,62,146,240,72,122,150,193,119,645,	0,2706,8265,9028,10619,12436,12745,15803,18477,21652,22190,22591,23881,
#Partially deleted in new
chr1	10365165	10368502	chr1:10365165-10368502	0	+	10365165	10365165	8553170	2	483,36,	0,3301,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	10381905	10386541	chr1:10381905-10386541	0	-	10381905	10381905	8553170	2	96,303,	0,4333,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	10381977	10383105	chr1:10381977-10383105	1	-	10381977	10381977	8553170	2	47,870,	0,258,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	10384627	10387150	chr1:10384627-10387150	3	-	10384627	10384627	8553170	2	344,1048,	0,1475,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	10395415	10396041	chr1:10395415-10396041	0	+	10395415	10395415	8553170	2	108,191,	0,435,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	10395617	10397432	chr1:10395617-10397432	3	+	10395617	10395617	8553170	2	759,610,	0,1205,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	10395782	10397376	chr1:10395782-10397376	0	+	10395782	10395782	8553170	2	588,554,	0,1040,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	10396237	10397363	chr1:10396237-10397363	0	+	10396237	10396237	8553170	2	139,531,	0,595,
#Partially deleted in new
chr1	10398591	10411552	chr1:10398591-10411552	0	+	10399659	10411552	789624	7	160,76,180,66,119,70,135,	0,1037,1801,4479,5569,9479,12826,
#Partially deleted in new
chr1	10399043	10400008	chr1:10399043-10400008	0	+	10399043	10399043	8553170	2	82,380,	0,585,
#Partially deleted in new
chr1	10399072	10404276	chr1:10399072-10404276	0	+	10399117	10400483	789624	5	53,76,197,66,116,	0,556,1303,3998,5088,
#Partially deleted in new
chr1	10399079	10420144	chr1:10399079-10420144	3	+	10399117	10419749	0	13	46,76,180,66,119,70,135,190,131,134,100,123,515,	0,549,1313,3991,5081,8991,12338,13982,17907,18296,19746,20337,20550,
#Partially deleted in new
chr1	10399111	10417509	chr1:10399111-10417509	0	+	10399117	10417509	789624	6	14,76,135,190,131,134,	0,517,12306,13950,17875,18264,
#Partially deleted in new
chr1	10399497	10408140	chr1:10399497-10408140	0	+	10399659	10408140	789624	5	207,180,66,119,70,	0,895,3573,4663,8573,
#Partially deleted in new
chr1	10399631	10413251	chr1:10399631-10413251	0	+	10399631	10413251	789624	6	73,180,119,70,135,190,	0,761,4529,8439,11786,13430,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	10412833	10417044	chr1:10412833-10417044	0	+	10412833	10412833	8553170	2	418,58,	0,4153,
#Partially deleted in new
chr1	10415291	10419830	chr1:10415291-10419830	0	+	10415291	10415291	8553170	6	101,131,134,100,123,201,	0,1695,2084,3534,4125,4338,
#Partially deleted in new
chr1	10418811	10419808	chr1:10418811-10419808	0	+	10418811	10418811	8553170	2	114,392,	0,605,
#Deleted in new
chr1	10429880	10430677	chr1:10429880-10430677	3	-	10429880	10429880	8553170	1	797,	0,
#Partially deleted in new
chr1	10430101	10452153	chr1:10430101-10452153	3	+	10430517	10451595	789624	5	467,124,34,67,777,	0,3740,4555,10245,21275,
#Partially deleted in new
chr1	10430383	10451659	chr1:10430383-10451659	1	+	10430517	10451401	789624	4	185,124,34,283,	0,3458,4273,20993,
#Partially deleted in new
chr1	10430434	10451411	chr1:10430434-10451411	1	+	10430517	10442405	789624	6	134,124,34,67,177,35,	0,3407,4222,9912,11830,20942,
#Partially deleted in new
chr1	10430442	10442809	chr1:10430442-10442809	3	+	10430517	10442405	0	5	126,124,34,67,545,	0,3399,4214,9904,11822,
#Deleted in new
chr1	10430511	10431130	chr1:10430511-10431130	0	+	10430511	10430511	8553170	2	57,255,	0,364,
#Partially deleted in new
chr1	10430782	10442334	chr1:10430782-10442334	0	+	10431289	10434657	789624	5	619,124,34,67,70,	0,3059,3874,9564,11482,
#Partially deleted in new
chr1	10430803	10452003	chr1:10430803-10452003	1	+	10431289	10451595	789624	4	598,34,67,627,	0,3853,9543,20573,
#Partially deleted in new
chr1	10431122	10442502	chr1:10431122-10442502	1	+	10431289	10440384	789624	3	279,67,238,	0,9224,11142,
#Partially deleted in new
chr1	10431257	10451659	chr1:10431257-10451659	1	+	10431289	10440384	789624	3	144,67,283,	0,9089,20119,
#Partially deleted in new
chr1	10440122	10442657	chr1:10440122-10442657	0	+	10440122	10440122	8553170	2	291,393,	0,2142,
#Deleted in new
chr1	10449718	10451902	chr1:10449718-10451902	3	+	10450223	10451595	789624	2	604,526,	0,1658,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	10456521	10472526	chr1:10456521-10472526	3	-	10461489	10472458	0	6	5181,152,190,143,162,204,	0,6536,6909,10668,12655,15801,
#Partially deleted in new
chr1	10461642	10472479	chr1:10461642-10472479	0	-	10463170	10472458	789624	5	60,222,143,162,157,	0,1345,5547,7534,10680,
#Partially deleted in new
chr1	10462467	10472488	chr1:10462467-10472488	1	-	10463033	10472458	0	5	742,190,143,162,166,	0,963,4722,6709,9855,
#Partially deleted in new
chr1	10472287	10536572	chr1:10472287-10536572	0	+	10472287	10472287	8553170	4	293,48,104,360,	0,22986,44740,63925,
#Partially deleted in new
chr1	10474886	10630758	chr1:10474886-10630758	3	+	10474966	10629987	0	9	116,48,85,129,86,103,98,92,1228,	0,20387,61326,124351,143445,148132,149453,152385,154644,
#Partially deleted in new
chr1	10474981	10623286	chr1:10474981-10623286	0	+	10474981	10623132	789624	6	21,48,85,129,86,268,	0,20292,61231,124256,143350,148037,
#Deleted in new
chr1	10535887	10536289	chr1:10535887-10536289	0	+	10535887	10535887	8553170	2	173,77,	0,325,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	10616835	10617115	chr1:10616835-10617115	3	+	10616835	10616835	8553170	1	280,	0,
#Partially deleted in new
chr1	10636603	10796648	chr1:10636603-10796648	3	-	10638941	10693889	789624	21	3456,142,152,172,199,339,123,155,64,136,842,173,165,91,69,835,489,39,53,157,85,	0,6255,6556,8313,9524,11197,12466,12679,14088,14337,16773,17815,19045,20042,21904,23098,28479,57270,68888,124097,159960,
#Deleted in new
chr1	10637120	10638763	chr1:10637120-10638763	0	-	10637120	10637120	8553170	2	288,49,	0,1594,
#Partially deleted in new
chr1	10639240	10654333	chr1:10639240-10654333	3	+	10639240	10639240	8553170	2	837,7086,	0,8007,
#Deleted in new
chr1	10642081	10645076	chr1:10642081-10645076	0	-	10642081	10645076	789624	4	241,142,152,160,	0,777,1078,2835,
#Partially deleted in new
chr1	10647212	10796650	chr1:10647212-10796650	1	-	10647796	10693889	789624	16	927,123,155,64,136,842,173,165,91,69,835,489,39,53,157,87,	0,1857,2070,3479,3728,6164,7206,8436,9433,11295,12489,17870,46661,58279,113488,149351,
#Deleted in new
chr1	10650483	10651100	chr1:10650483-10651100	0	-	10650483	10650483	8553170	2	272,160,	0,457,
#Partially deleted in new
chr1	10652983	10694479	chr1:10652983-10694479	0	-	10652983	10652983	8553170	9	1235,173,165,91,69,835,489,39,183,	0,1435,2665,3662,5524,6718,12099,40890,41313,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	10658006	10661398	chr1:10658006-10661398	0	-	10658006	10658006	8553170	2	570,1697,	0,1695,
#Partially deleted in new
chr1	10660736	10693912	chr1:10660736-10693912	0	-	10660736	10660736	8553170	3	120,489,39,	0,4346,33137,
#Deleted in new
chr1	10704195	10705575	chr1:10704195-10705575	0	-	10704195	10704195	8553170	2	367,84,	0,1296,
#Deleted in new
chr1	10895760	10895998	chr1:10895760-10895998	7	+	10895760	10895760	16724991	1	238,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	10946470	10949751	chr1:10946470-10949751	0	-	10946470	10946470	8553170	2	268,2109,	0,1172,
#Partially deleted in new
chr1	10946472	10982037	chr1:10946472-10982037	3	-	10947662	10982037	789624	13	269,1202,191,124,197,85,138,39,144,125,120,101,26,	0,1170,3151,7546,8517,10550,11143,12241,17655,19885,23497,29683,35539,
#Partially deleted in new
chr1	10946472	10964201	chr1:10946472-10964201	0	-	10947662	10964201	789624	8	269,1202,191,124,197,169,39,74,	0,1170,3151,7546,8517,11112,12241,17655,
#Partially deleted in new
chr1	10946474	10947870	chr1:10946474-10947870	0	-	10947662	10947870	789624	2	112,228,	0,1168,
#Partially deleted in new
chr1	10946729	10976215	chr1:10946729-10976215	0	-	10947662	10976215	789624	12	12,1202,113,124,197,85,138,39,144,125,120,60,	0,913,2972,7289,8260,10293,10886,11984,17398,19628,23240,29426,
#Partially deleted in new
chr1	10990977	10991797	chr1:10990977-10991797	7	-	10990977	10990977	16724991	2	114,380,	0,440,
#Partially deleted in new
chr1	11012343	11020489	chr1:11012343-11020489	0	+	11013727	11020489	789624	5	85,250,164,141,61,	0,1372,4500,6389,8085,
#Partially deleted in new
chr1	11012399	11026420	chr1:11012399-11026420	3	+	11013727	11022654	0	6	344,250,164,141,171,4297,	0,1316,4444,6333,8029,9724,
#Partially deleted in new
chr1	11012423	11023609	chr1:11012423-11023609	1	+	11013727	11022654	0	6	57,250,164,141,171,1486,	0,1292,4420,6309,8005,9700,
#Partially deleted in new
chr1	11012424	11024183	chr1:11012424-11024183	0	+	11013727	11023248	789624	8	182,250,164,141,171,118,137,120,	0,1291,4419,6308,8004,9699,10768,11639,
#Partially deleted in new
chr1	11012621	11023248	chr1:11012621-11023248	1	+	11013727	11023248	789624	7	122,250,164,141,171,127,56,	0,1094,4222,6111,7807,9502,10571,
#Partially deleted in new
chr1	11012652	11022858	chr1:11012652-11022858	0	+	11013727	11018749	789624	5	91,250,141,171,735,	0,1063,6080,7776,9471,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	11012653	11022176	chr1:11012653-11022176	0	+	11013727	11016127	789624	7	90,250,132,164,141,171,53,	0,1062,3469,4190,6079,7775,9470,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	11012653	11020589	chr1:11012653-11020589	0	+	11013727	11020589	789624	6	90,250,123,164,141,161,	0,1062,2870,4190,6079,7775,
#Partially deleted in new
chr1	11012661	11030528	chr1:11012661-11030528	3	+	11013727	11023248	789624	10	82,250,164,141,171,127,137,272,99,350,	0,1054,4182,6071,7767,9462,10531,11402,12448,17517,
#Partially deleted in new
chr1	11012669	11022310	chr1:11012669-11022310	0	+	11013727	11022310	789624	5	74,250,164,141,187,	0,1046,4174,6063,9454,
#Partially deleted in new
chr1	11013715	11024183	chr1:11013715-11024183	1	+	11013727	11023248	789624	6	250,164,141,171,118,991,	0,3128,5017,6713,8408,9477,
#Partially deleted in new
chr1	11013715	11025019	chr1:11013715-11025019	0	+	11013727	11023248	789624	7	250,164,141,171,127,137,956,	0,3128,5017,6713,8408,9477,10348,
#Partially deleted in new
chr1	11013727	11023341	chr1:11013727-11023341	1	+	11013727	11023327	789624	6	238,164,141,171,127,79,	0,3116,5005,6701,8396,9535,
#Partially deleted in new
chr1	11013727	11023341	chr1:11013727-11023341	1	+	11013727	11023248	789624	6	238,164,141,171,145,149,	0,3116,5005,6701,8396,9465,
#Partially deleted in new
chr1	11013727	11022651	chr1:11013727-11022651	1	+	11013727	11022651	789624	5	238,18,101,118,299,	0,3116,6771,8396,8625,
#Partially deleted in new
chr1	11013727	11023234	chr1:11013727-11023234	1	+	11013727	11023234	789624	6	238,164,141,171,54,42,	0,3116,5005,6701,8396,9465,
#Partially deleted in new
chr1	11016858	11023287	chr1:11016858-11023287	0	+	11016858	11023183	789624	5	149,141,171,118,127,	0,1874,3570,5265,6302,
#Partially deleted in new
chr1	11016864	11023590	chr1:11016864-11023590	0	+	11016864	11023248	789624	5	143,141,171,127,398,	0,1868,3564,5259,6328,
#Partially deleted in new
chr1	11016877	11019186	chr1:11016877-11019186	0	+	11016877	11016877	8553170	2	130,454,	0,1855,
#Partially deleted in new
chr1	11016965	11024193	chr1:11016965-11024193	0	+	11016965	11023248	789624	6	42,141,171,118,137,130,	0,1767,3463,5158,6227,7098,
#Partially deleted in new
chr1	11018779	11024184	chr1:11018779-11024184	0	+	11018779	11023183	789624	5	94,171,127,169,121,	0,1649,3344,4381,5284,
#Partially deleted in new
chr1	11018779	11024043	chr1:11018779-11024043	0	+	11018779	11023248	789624	5	94,171,127,137,177,	0,1649,3344,4413,5087,
#Partially deleted in new
chr1	11018852	11024043	chr1:11018852-11024043	0	+	11018852	11023327	789624	5	21,171,127,67,177,	0,1576,3271,4410,5014,
#Partially deleted in new
chr1	11020432	11024183	chr1:11020432-11024183	0	+	11020432	11023170	789624	4	167,54,174,120,	0,1691,2723,3631,
#Partially deleted in new
chr1	11020505	11030430	chr1:11020505-11030430	0	+	11020505	11023248	789624	5	94,118,137,99,252,	0,1618,2687,4604,9673,
#Partially deleted in new
chr1	11020586	11025207	chr1:11020586-11025207	0	+	11020586	11023248	789624	5	13,127,137,34,98,	0,1537,2606,3715,4523,
#Partially deleted in new
chr1	11022143	11030526	chr1:11022143-11030526	0	+	11022143	11025186	789624	3	107,99,348,	0,2966,8035,
#Deleted in new
chr1	11022307	11025221	chr1:11022307-11025221	0	+	11022307	11022654	789624	3	408,137,112,	0,885,2802,
#Deleted in new
chr1	11022547	11024273	chr1:11022547-11024273	0	+	11022547	11022654	789624	2	782,210,	0,1516,
#Deleted in new
chr1	11022817	11025492	chr1:11022817-11025492	0	+	11022817	11022817	8553170	3	512,34,383,	0,1484,2292,
#Deleted in new
chr1	11023044	11025203	chr1:11023044-11025203	0	+	11023044	11023044	8553170	2	285,94,	0,2065,
#Deleted in new
chr1	11023197	11025739	chr1:11023197-11025739	0	+	11023197	11023248	789624	4	132,272,99,189,	0,866,1912,2353,
#Deleted in new
chr1	11023322	11024152	chr1:11023322-11024152	0	+	11023322	11023322	8553170	2	345,89,	0,741,
#Deleted in new
chr1	11023928	11025492	chr1:11023928-11025492	0	+	11023928	11023928	8553170	2	407,383,	0,1181,
#Partially deleted in new
chr1	11024792	11030525	chr1:11024792-11030525	0	+	11024792	11024792	8553170	2	416,347,	0,5386,
#Partially deleted in new
chr1	11026522	11047223	chr1:11026522-11047223	3	-	11026884	11047207	0	11	1126,75,135,79,119,148,197,132,178,229,21,	0,3653,4225,8305,11170,16352,16816,18885,20033,20368,20680,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	11029658	11030528	chr1:11029658-11030528	0	+	11029658	11029658	8553170	1	870,	0,
#Partially deleted in new
chr1	11037692	11043198	chr1:11037692-11043198	0	-	11037692	11037692	8553170	2	119,324,	0,5182,
#Partially deleted in new
chr1	11044797	11047233	chr1:11044797-11047233	1	-	11044939	11047207	0	5	156,132,178,229,31,	0,610,1758,2093,2405,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	11044797	11047227	chr1:11044797-11047227	0	-	11044797	11044797	8553170	3	1936,229,25,	0,2093,2405,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	11054583	11055204	chr1:11054583-11055204	0	-	11054583	11054583	8553170	2	302,243,	0,378,
#Partially deleted in new
chr1	11054588	11060024	chr1:11054588-11060024	3	-	11054864	11059943	0	8	297,123,146,84,154,93,121,248,	0,373,1192,1422,2015,4211,4636,5188,
#Partially deleted in new
chr1	11054663	11055820	chr1:11054663-11055820	0	-	11054874	11055820	789624	2	421,40,	0,1117,
#Partially deleted in new
chr1	11056010	11060020	chr1:11056010-11060020	0	-	11059265	11059943	789624	5	84,154,93,156,244,	0,593,2789,3214,3766,
#Partially deleted in new
chr1	11056010	11058873	chr1:11056010-11058873	0	-	11056010	11058873	789624	3	84,154,164,	0,593,2699,
#Partially deleted in new
chr1	11056701	11059686	chr1:11056701-11059686	0	-	11056701	11059434	789624	3	56,93,462,	0,2098,2523,
#Partially deleted in new
chr1	11066617	11099869	chr1:11066617-11099869	1	-	11066717	11099831	0	24	131,77,62,172,74,85,96,107,79,51,112,51,149,157,191,144,111,76,115,166,105,124,137,149,	0,1390,2027,2941,4282,5469,7613,10224,10747,10983,13093,13881,14146,14464,16070,20830,21182,21505,23936,24396,24875,29140,31402,33103,
#Partially deleted in new
chr1	11066617	11099881	chr1:11066617-11099881	3	-	11066717	11099831	0	25	131,77,62,172,74,85,75,96,107,79,51,112,51,149,157,191,144,111,76,115,166,105,124,137,161,	0,1390,2027,2941,4282,5469,7316,7613,10224,10747,10983,13093,13881,14146,14464,16070,20830,21182,21505,23936,24396,24875,29140,31402,33103,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	11066620	11081217	chr1:11066620-11081217	0	-	11066620	11066620	8553170	13	128,77,62,172,89,85,75,96,810,112,16,149,136,	0,1387,2024,2938,4279,5466,7313,7610,10221,13090,13878,14143,14461,
#Partially deleted in new
chr1	11066684	11068924	chr1:11066684-11068924	0	-	11066684	11066684	8553170	3	64,77,280,	0,1323,1960,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	11068470	11073097	chr1:11068470-11073097	3	+	11068470	11068470	8553170	2	243,2439,	0,2188,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	11068644	11073026	chr1:11068644-11073026	0	-	11068644	11068644	8553170	3	62,172,2127,	0,914,2255,
#Partially deleted in new
chr1	11068653	11072395	chr1:11068653-11072395	0	-	11068653	11068653	8553170	4	53,172,74,309,	0,905,2246,3433,
#Partially deleted in new
chr1	11074287	11079800	chr1:11074287-11079800	0	-	11074287	11074287	8553170	5	39,107,114,51,90,	0,2554,3042,3313,5423,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	11077008	11077651	chr1:11077008-11077651	0	-	11077008	11077008	8553170	2	435,51,	0,592,
#Partially deleted in new
chr1	11079769	11080857	chr1:11079769-11080857	0	-	11079769	11079769	8553170	2	53,359,	0,729,
#Partially deleted in new
chr1	11080700	11082623	chr1:11080700-11082623	0	-	11080700	11080700	8553170	3	212,157,90,	0,381,1833,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	11091502	11099854	chr1:11091502-11099854	0	-	11095544	11099831	789624	5	95,132,124,137,134,	0,3913,4255,6517,8218,
#Partially deleted in new
chr1	11099674	11102100	chr1:11099674-11102100	0	+	11099674	11099674	789624	2	140,300,	0,2126,
#Partially deleted in new
chr1	11099674	11102051	chr1:11099674-11102051	3	+	11099674	11099674	789624	2	236,251,	0,2126,
#Partially deleted in new
chr1	11106534	11262507	chr1:11106534-11262507	3	-	11107484	11259409	0	58	966,106,81,81,66,136,75,73,83,123,148,136,175,135,183,123,99,97,101,249,118,116,132,126,108,78,116,101,140,76,146,163,143,147,93,163,113,168,87,251,130,135,93,90,123,206,216,245,129,187,109,276,135,201,233,109,176,63,	0,1646,2755,3114,6317,7783,8278,8861,10469,14711,15444,17963,20087,20475,21089,21469,21919,22320,23203,23994,26545,27816,32769,32998,38113,38433,40141,43591,50617,60907,92723,93006,98026,102777,104279,105777,106261,106864,109613,122133,124390,124765,125901,126863,127608,131308,131867,133768,135018,136579,141090,141284,147304,149457,150398,151950,152713,155910,
#Partially deleted in new
chr1	11106534	11131558	chr1:11106534-11131558	1	-	11107484	11130756	789624	20	966,106,81,81,66,136,75,73,83,123,148,136,175,135,183,123,99,97,101,1030,	0,1646,2755,3114,6317,7783,8278,8861,10469,14711,15444,17963,20087,20475,21089,21469,21919,22320,23203,23994,
#Partially deleted in new
chr1	11107284	11114629	chr1:11107284-11114629	0	-	11107284	11107284	8553170	6	216,106,81,81,66,312,	0,896,2005,2364,5567,7033,
#Partially deleted in new
chr1	11107306	11115527	chr1:11107306-11115527	0	-	11107306	11107306	8553170	9	194,106,81,81,240,66,136,75,132,	0,874,1983,2342,4207,5545,7011,7506,8089,
#Partially deleted in new
chr1	11109302	11115663	chr1:11109302-11115663	0	-	11109302	11115452	789624	6	68,81,66,136,75,268,	0,346,3549,5015,5510,6093,
#Partially deleted in new
chr1	11131593	11145025	chr1:11131593-11145025	0	-	11131593	11131593	8553170	5	1604,116,132,126,378,	0,2757,7710,7939,13054,
#Deleted in new
chr1	11138953	11139660	chr1:11138953-11139660	0	-	11138953	11138953	8553170	2	482,128,	0,579,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	11143897	11149537	chr1:11143897-11149537	3	+	11143897	11143897	789624	4	90,220,127,268,	0,769,1255,5372,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	11144423	11149537	chr1:11144423-11149537	0	+	11144423	11144423	8553170	4	58,220,127,268,	0,243,729,4846,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	11152349	11152452	chr1:11152349-11152452	3	+	11152349	11152349	8553170	1	103,	0,
#Partially deleted in new
chr1	11189340	11195981	chr1:11189340-11195981	3	+	11189579	11195023	789624	5	615,101,195,199,1128,	0,2929,4239,5120,5513,
#Deleted in new
chr1	11193626	11195178	chr1:11193626-11195178	0	+	11193626	11193626	8553170	3	148,134,325,	0,899,1227,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	11226253	11226360	chr1:11226253-11226360	3	+	11226253	11226253	8553170	1	107,	0,
#Deleted in new
chr1	11232962	11233112	chr1:11232962-11233112	7	+	11232962	11232962	16724991	1	150,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	11273205	11288434	chr1:11273205-11288434	3	+	11273531	11286131	789624	2	855,2791,	0,12438,
#Partially deleted in new
chr1	11273527	11295164	chr1:11273527-11295164	1	+	11273531	11294883	789624	2	533,292,	0,21345,
#Partially deleted in new
chr1	11273933	11296049	chr1:11273933-11296049	0	+	11273933	11294890	789624	3	127,89,1177,	0,11710,20939,
#Partially deleted in new
chr1	11278615	11279351	chr1:11278615-11279351	7	-	11278615	11278615	16724991	2	253,184,	0,552,
#Partially deleted in new
chr1	11311733	11319093	chr1:11311733-11319093	3	-	11311733	11311733	8553170	4	236,148,271,87,	0,522,2871,7273,
#Deleted in new
chr1	11425256	11425821	chr1:11425256-11425821	7	-	11425256	11425256	16724991	1	565,	0,
#Deleted in new
chr1	11479165	11481960	chr1:11479165-11481960	0	+	11479165	11479165	8553170	2	207,703,	0,2092,
#Partially deleted in new
chr1	11479237	11537584	chr1:11479237-11537584	3	+	11500992	11536686	789624	21	135,1099,220,137,135,161,140,149,162,162,114,137,185,131,173,127,146,160,114,167,1261,	0,21752,23440,35152,36131,36763,38225,40117,40481,41449,44704,45938,47413,50318,50549,51669,52327,55143,55773,56240,57086,
#Deleted in new
chr1	11500802	11502016	chr1:11500802-11502016	3	-	11500802	11500802	8553170	2	585,466,	0,748,
#Deleted in new
chr1	11533675	11537225	chr1:11533675-11537225	1	+	11533793	11536655	789624	5	152,160,114,167,902,	0,705,1335,1802,2648,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	11609530	11613355	chr1:11609530-11613355	3	+	11609530	11609530	789624	3	583,136,566,	0,2312,3259,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	11623557	11643416	chr1:11623557-11643416	3	+	11623557	11623557	8553170	2	53,2041,	0,17818,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	11637017	11650770	chr1:11637017-11650770	0	-	11648693	11650770	789624	7	652,156,737,139,96,130,305,	0,8032,11074,12069,12761,12927,13448,
#Partially deleted in new
chr1	11648366	11654682	chr1:11648366-11654682	3	-	11648693	11654340	789624	6	462,139,96,130,369,364,	0,720,1412,1578,2099,5952,
#Deleted in new
chr1	11649527	11650713	chr1:11649527-11650713	0	-	11649527	11649527	8553170	3	347,130,248,	0,417,938,
#Partially deleted in new
chr1	11649873	11654197	chr1:11649873-11654197	0	-	11649873	11649873	8553170	4	201,369,37,167,	0,592,3517,4157,
#Partially deleted in new
chr1	11650546	11655785	chr1:11650546-11655785	0	-	11650546	11655712	789624	2	288,146,	0,5093,
#Partially deleted in new
chr1	11650736	11653529	chr1:11650736-11653529	0	-	11650736	11650736	8553170	2	98,139,	0,2654,
#Partially deleted in new
chr1	11654374	11662289	chr1:11654374-11662289	1	+	11655835	11661305	0	5	207,295,98,136,1160,	0,1431,3892,4361,6755,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	11654856	11663327	chr1:11654856-11663327	3	+	11655835	11661273	0	7	96,372,295,127,96,136,2198,	0,471,949,3410,3676,3879,6273,
#Partially deleted in new
chr1	11654856	11658868	chr1:11654856-11658868	0	+	11655835	11658868	789624	5	96,372,295,98,133,	0,471,949,3410,3879,
#Partially deleted in new
chr1	11654880	11661391	chr1:11654880-11661391	1	+	11655835	11661305	789624	6	72,295,98,96,136,262,	0,925,3386,3652,3855,6249,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	11654900	11663326	chr1:11654900-11663326	1	+	11655835	11661273	0	6	52,295,127,96,136,2197,	0,905,3366,3632,3835,6229,
#Partially deleted in new
chr1	11654909	11661349	chr1:11654909-11661349	1	+	11655835	11661305	0	6	43,30,295,98,136,220,	0,760,896,3357,3826,6220,
#Partially deleted in new
chr1	11654909	11662291	chr1:11654909-11662291	1	+	11655835	11661305	0	5	43,295,98,136,1162,	0,896,3357,3826,6220,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	11656064	11663117	chr1:11656064-11663117	0	+	11656064	11661305	789624	5	36,98,136,179,493,	0,2202,2671,5065,6560,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	11664123	11674354	chr1:11664123-11674354	3	+	11668658	11673851	789624	6	132,289,127,96,136,740,	0,4532,7142,7804,9153,9491,
#Partially deleted in new
chr1	11664485	11672064	chr1:11664485-11672064	0	+	11664485	11664485	8553170	4	250,289,127,137,	0,4170,6780,7442,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	11668695	11674030	chr1:11668695-11674030	0	+	11668695	11673851	789624	4	249,127,136,416,	0,2570,4581,4919,
#Partially deleted in new
chr1	11674479	11691650	chr1:11674479-11691650	3	-	11674774	11680601	0	11	337,93,74,95,101,72,119,52,400,279,238,	0,602,1178,1566,2368,3063,5873,6082,6559,7258,16933,
#Partially deleted in new
chr1	11674480	11681214	chr1:11674480-11681214	1	-	11674774	11680601	0	9	336,93,74,95,101,72,119,52,176,	0,601,1177,1565,2367,3062,5872,6081,6558,
#Partially deleted in new
chr1	11674524	11691477	chr1:11674524-11691477	1	-	11674774	11680601	789624	9	292,93,74,95,140,72,119,52,65,	0,557,1133,1521,2284,3018,5828,6037,16888,
#Partially deleted in new
chr1	11674677	11681118	chr1:11674677-11681118	1	-	11674774	11680601	789624	9	139,93,74,95,140,72,119,52,80,	0,404,980,1368,2131,2865,5675,5884,6361,
#Partially deleted in new
chr1	11674747	11691609	chr1:11674747-11691609	1	-	11674774	11680601	0	9	69,93,74,95,101,72,119,52,197,	0,334,910,1298,2100,2795,5605,5814,16665,
#Partially deleted in new
chr1	11675655	11681111	chr1:11675655-11681111	0	-	11675655	11680601	789624	6	76,95,101,72,261,73,	0,390,1192,1887,4697,5383,
#Partially deleted in new
chr1	11675656	11681131	chr1:11675656-11681131	0	-	11675656	11680601	789624	6	75,95,101,72,119,570,	0,389,1191,1886,4696,4905,
#Partially deleted in new
chr1	11675699	11681111	chr1:11675699-11681111	0	-	11675699	11675699	8553170	6	441,101,72,119,52,73,	0,1148,1843,4653,4862,5339,
#Partially deleted in new
chr1	11676871	11691593	chr1:11676871-11691593	0	-	11676871	11676871	8553170	4	743,119,52,181,	0,3481,3690,14541,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	11691728	11725857	chr1:11691728-11725857	3	+	11706258	11719696	0	7	125,461,191,115,90,90,6274,	0,14520,17546,20122,20611,23390,27855,
#Partially deleted in new
chr1	11736083	11750710	chr1:11736083-11750710	1	+	11736208	11750104	789624	4	152,106,175,634,	0,11356,12331,13993,
#Partially deleted in new
chr1	11736116	11750326	chr1:11736116-11750326	0	+	11736208	11746117	789624	6	119,35,236,106,196,250,	0,9686,9871,11323,12298,13960,
#Partially deleted in new
chr1	11736123	11750316	chr1:11736123-11750316	1	+	11736208	11748593	789624	6	112,35,97,106,196,240,	0,9679,10003,11316,12291,13953,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	11736129	11746672	chr1:11736129-11746672	0	+	11736129	11736129	8553170	2	106,870,	0,9673,
#Partially deleted in new
chr1	11736141	11750488	chr1:11736141-11750488	0	+	11736141	11736141	8553170	6	94,35,294,106,175,412,	0,9661,9788,11298,12273,13935,
#Partially deleted in new
chr1	11736146	11750771	chr1:11736146-11750771	1	+	11736208	11750192	789624	5	89,35,106,175,695,	0,9656,11293,12268,13930,
#Partially deleted in new
chr1	11736152	11750578	chr1:11736152-11750578	1	+	11736208	11748593	789624	7	83,36,35,97,106,196,502,	0,8380,9650,9974,11287,12262,13924,
#Partially deleted in new
chr1	11736154	11750765	chr1:11736154-11750765	3	+	11736208	11750192	789624	5	81,35,106,196,689,	0,9648,11285,12260,13922,
#Partially deleted in new
chr1	11736172	11750409	chr1:11736172-11750409	1	+	11736208	11750104	789624	6	63,35,97,106,175,333,	0,9630,9954,11267,12242,13904,
#Partially deleted in new
chr1	11736174	11750633	chr1:11736174-11750633	1	+	11736208	11750286	789624	4	61,35,196,557,	0,9628,12240,13902,
#Partially deleted in new
chr1	11745800	11750409	chr1:11745800-11750409	0	+	11745800	11745800	8553170	5	37,97,106,175,333,	0,326,1639,2614,4276,
#Partially deleted in new
chr1	11745997	11750488	chr1:11745997-11750488	0	+	11745997	11745997	8553170	4	226,106,175,412,	0,1442,2417,4079,
#Partially deleted in new
chr1	11746008	11750125	chr1:11746008-11750125	0	+	11746008	11746008	8553170	4	215,106,196,49,	0,1431,2406,4068,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	11747511	11754802	chr1:11747511-11754802	0	+	11747511	11747511	8553170	4	34,196,109,378,	0,903,2565,6913,
#Partially deleted in new
chr1	11761786	11789584	chr1:11761786-11789584	3	+	11761786	11789446	789624	21	488,152,720,122,44,243,113,178,176,175,157,155,209,145,420,142,106,175,215,95,315,	0,2544,4070,5177,5434,6290,9737,10295,13648,14677,16873,17139,18015,20402,22387,23361,25601,26086,26377,26865,27483,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	11766741	11778310	chr1:11766741-11778310	0	+	11766741	11766741	8553170	9	344,44,199,155,113,178,176,175,1182,	0,479,1335,2231,4782,5340,8693,9722,10387,
#Partially deleted in new
chr1	11772121	11789585	chr1:11772121-11789585	0	+	11772121	11789446	789624	14	138,176,175,157,155,209,145,420,142,106,175,215,95,316,	0,3313,4342,6538,6804,7680,10067,12052,13026,15266,15751,16042,16530,17148,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	11777076	11779619	chr1:11777076-11779619	3	-	11777076	11777076	789624	3	1208,163,497,	0,1568,2046,
#Partially deleted in new
chr1	11778930	11789478	chr1:11778930-11789478	0	+	11778930	11789446	789624	10	150,209,145,420,142,106,175,230,95,209,	0,871,3258,5243,6217,8457,8942,9218,9721,10339,
#Partially deleted in new
chr1	11779816	11789478	chr1:11779816-11789478	0	+	11779816	11789459	789624	9	194,140,420,142,106,175,136,95,209,	0,2377,4357,5331,7571,8056,8426,8835,9453,
#Partially deleted in new
chr1	11785170	11787955	chr1:11785170-11787955	0	+	11785170	11785170	8553170	2	119,568,	0,2217,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	11785722	11805413	chr1:11785722-11805413	1	-	11790679	11803116	0	12	5176,120,102,183,181,135,251,194,111,239,1652,34,	0,5484,6555,8184,8635,9006,9375,10483,14489,15438,17158,19657,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	11785729	11803514	chr1:11785729-11803514	1	-	11790679	11803514	0	12	5169,120,102,183,181,135,251,194,111,239,249,110,	0,5477,6548,8177,8628,8999,9368,10476,14482,15431,17151,17675,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	11785731	11805413	chr1:11785731-11805413	1	-	11790679	11803514	0	13	5167,120,102,183,181,135,251,194,111,239,249,1128,34,	0,5475,6546,8175,8626,8997,9366,10474,14480,15429,17149,17673,19648,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	11786602	11806920	chr1:11786602-11806920	3	-	11790679	11803116	0	12	4296,120,102,183,181,135,251,194,111,239,249,1033,	0,4604,5675,7304,7755,8126,8495,9603,13609,14558,16278,19285,
#Deleted in new
chr1	11787811	11789585	chr1:11787811-11789585	0	+	11787811	11787811	8553170	4	236,136,95,316,	0,431,840,1458,
#Partially deleted in new
chr1	11789765	11806455	chr1:11789765-11806455	0	-	11800309	11803116	789624	11	1133,120,102,183,181,135,251,194,111,249,568,	0,1441,2512,4141,4592,4963,5332,6440,10446,13115,16122,
#Partially deleted in new
chr1	11790040	11803677	chr1:11790040-11803677	0	-	11790040	11790040	8553170	11	676,120,102,183,181,620,194,111,239,246,273,	0,1166,2237,3866,4317,4688,6165,10171,11120,12840,13364,
#Partially deleted in new
chr1	11790067	11803526	chr1:11790067-11803526	1	-	11790679	11803514	789624	12	831,120,102,183,181,135,251,194,111,239,246,122,	0,1139,2210,3839,4290,4661,5030,6138,10144,11093,12813,13337,
#Partially deleted in new
chr1	11790067	11806002	chr1:11790067-11806002	0	-	11791727	11803116	789624	13	831,120,109,102,183,181,135,251,194,111,239,249,115,	0,1139,1569,2210,3839,4290,4661,5030,6138,10144,11093,12813,15820,
#Partially deleted in new
chr1	11790348	11803383	chr1:11790348-11803383	1	-	11790539	11803116	789624	11	368,120,102,183,181,135,251,194,111,239,503,	0,858,1929,3558,4009,4380,4749,5857,9863,10812,12532,
#Partially deleted in new
chr1	11790565	11803526	chr1:11790565-11803526	0	-	11790565	11790565	8553170	11	333,120,102,183,181,620,194,111,239,249,122,	0,641,1712,3341,3792,4163,5640,9646,10595,12315,12839,
#Partially deleted in new
chr1	11790641	11796545	chr1:11790641-11796545	1	-	11790679	11796250	789624	8	257,120,102,183,181,135,251,340,	0,565,1636,3265,3716,4087,4456,5564,
#Partially deleted in new
chr1	11795100	11803448	chr1:11795100-11803448	0	-	11795100	11795100	8553170	5	248,111,239,249,44,	0,5111,6060,7780,8304,
#Partially deleted in new
chr1	11796296	11806063	chr1:11796296-11806063	0	-	11796296	11803116	789624	5	103,111,239,246,176,	0,3915,4864,6584,9591,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	11799791	11803526	chr1:11799791-11803526	0	-	11799791	11799791	8553170	2	1608,646,	0,3089,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	11799856	11806006	chr1:11799856-11806006	0	-	11799856	11799856	8553170	3	1543,249,119,	0,3024,6031,
#Partially deleted in new
chr1	11801204	11805936	chr1:11801204-11805936	0	-	11801204	11803116	789624	3	195,249,590,	0,1676,4142,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	11801317	11805413	chr1:11801317-11805413	0	-	11801317	11801317	8553170	4	99,249,734,34,	0,1563,2481,4062,
#Partially deleted in new
chr1	11801332	11806103	chr1:11801332-11806103	0	-	11801332	11801332	8553170	3	84,249,216,	0,1548,4555,
#Partially deleted in new
chr1	11803027	11805294	chr1:11803027-11805294	0	-	11803027	11803116	789624	2	102,296,	0,1971,
#Partially deleted in new
chr1	11806095	11843143	chr1:11806095-11843143	1	+	11806262	11840223	789624	22	254,60,66,67,107,127,68,59,133,114,167,127,124,154,160,107,187,158,157,108,126,3001,	0,1035,10519,13392,16599,17611,18390,20060,20993,22010,22362,23100,27419,27781,28140,28388,29871,30903,31247,32239,32439,34047,
#Partially deleted in new
chr1	11806210	11843144	chr1:11806210-11843144	3	+	11806262	11840223	789624	23	139,60,66,66,67,107,127,68,59,133,114,167,127,124,154,160,107,187,158,157,108,126,3002,	0,920,9635,10404,13277,16484,17496,18275,19945,20878,21895,22247,22985,27304,27666,28025,28273,29756,30788,31132,32124,32324,33932,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	11806212	11820779	chr1:11806212-11820779	0	+	11806212	11806212	8553170	6	137,60,66,66,67,418,	0,918,9633,10402,13275,14149,
#Partially deleted in new
chr1	11806230	11848079	chr1:11806230-11848079	0	+	11806262	11834011	8553170	27	119,60,66,66,67,107,127,68,59,133,114,167,127,124,144,160,107,187,158,157,108,126,229,150,340,220,503,	0,900,9615,10384,13257,16464,17476,18255,19925,20858,21875,22227,22965,27284,27656,28005,28253,29736,30768,31112,32104,32304,33912,34827,37503,39316,41346,
#Partially deleted in new
chr1	11806259	11839050	chr1:11806259-11839050	1	+	11806262	11838993	789624	22	90,60,66,66,67,107,127,68,59,133,114,167,127,124,154,160,107,187,158,157,108,516,	0,871,9586,10355,13228,16435,17447,18226,19896,20829,21846,22198,22936,27255,27617,27976,28224,29707,30739,31083,32075,32275,
#Partially deleted in new
chr1	11806262	11828218	chr1:11806262-11828218	0	+	11806262	11806262	8553170	11	87,60,66,66,67,107,127,68,69,133,113,	0,868,9583,10352,13225,16432,17444,18223,19893,20826,21843,
#Partially deleted in new
chr1	11806262	11828218	chr1:11806262-11828218	0	+	11806262	11806262	8553170	11	87,60,66,66,67,107,127,68,59,107,113,	0,868,9583,10352,13225,16432,17444,18223,19893,20852,21843,
#Partially deleted in new
chr1	11806262	11829303	chr1:11806262-11829303	0	+	11806262	11806262	8553170	12	87,60,66,66,67,107,127,68,59,133,114,108,	0,868,9583,10352,13225,16432,17444,18223,19893,20826,21843,22933,
#Partially deleted in new
chr1	11829848	11834308	chr1:11829848-11834308	0	+	11829848	11829848	8553170	4	422,124,154,73,	0,3666,4028,4387,
#Partially deleted in new
chr1	11841016	11847684	chr1:11841016-11847684	0	+	11841016	11841016	789624	4	191,370,220,251,	0,2687,4530,6417,
#Deleted in new
chr1	11843811	11843984	chr1:11843811-11843984	3	+	11843811	11843811	8553170	1	173,	0,
#Deleted in new
chr1	11845548	11845697	chr1:11845548-11845697	3	+	11845548	11845548	8553170	1	149,	0,
#Partially deleted in new
chr1	11845708	11847783	chr1:11845708-11847783	3	-	11846008	11847684	789624	3	306,327,222,	0,1404,1853,
#Partially deleted in new
chr1	11845711	11847783	chr1:11845711-11847783	1	-	11846002	11847684	789624	4	297,3,327,222,	0,300,1401,1850,
#Partially deleted in new
chr1	11845878	11848345	chr1:11845878-11848345	1	-	11846008	11847412	789624	3	136,327,265,	0,1234,2202,
#Deleted in new
chr1	11847441	11847549	chr1:11847441-11847549	3	+	11847441	11847441	8553170	1	108,	0,
#Partially deleted in new
chr1	11857463	11858931	chr1:11857463-11858931	3	-	11857654	11858833	0	3	208,256,230,	0,750,1238,
#Deleted in new
chr1	11877769	11880406	chr1:11877769-11880406	7	+	11877769	11877769	16724991	1	2637,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	11908151	11908271	chr1:11908151-11908271	3	+	11908151	11908151	5263520	1	120,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	11909807	11909927	chr1:11909807-11909927	3	-	11909807	11909807	8553170	1	120,	0,
#Partially deleted in new
chr1	11919590	11926423	chr1:11919590-11926423	3	-	11920314	11926237	789624	3	742,854,1219,	0,3045,5614,
#Partially deleted in new
chr1	11920182	11926403	chr1:11920182-11926403	1	-	11920314	11926237	789624	4	150,854,1065,101,	0,2453,5022,6120,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	11922174	11926428	chr1:11922174-11926428	1	-	11922518	11926237	789624	2	1315,1224,	0,3030,
#Partially deleted in new
chr1	11934204	11958620	chr1:11934204-11958620	0	+	11934204	11934204	8553170	9	119,92,134,164,113,64,98,102,105,	0,13771,15568,16152,18418,20625,22712,23637,24311,
#Partially deleted in new
chr1	11934693	11952691	chr1:11934693-11952691	0	+	11934779	11952691	789624	6	162,141,92,134,164,69,	0,9828,13282,15079,15663,17929,
#Partially deleted in new
chr1	11934733	11954767	chr1:11934733-11954767	0	+	11934733	11934733	8553170	6	122,92,134,164,113,194,	0,13242,15039,15623,17889,19840,
#Partially deleted in new
chr1	11934742	11957943	chr1:11934742-11957943	0	+	11934779	11957943	789624	8	113,92,134,164,113,64,104,102,	0,13233,15030,15614,17880,20087,22347,23099,
#Partially deleted in new
chr1	11934752	11975537	chr1:11934752-11975537	3	+	11934779	11974808	789624	19	103,92,134,164,113,64,98,102,132,122,105,126,142,114,66,105,147,126,885,	0,13223,15020,15604,17870,20077,22164,23089,23763,25893,28779,29422,29891,30727,31498,32234,35917,38119,39900,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	11954300	11958593	chr1:11954300-11958593	0	+	11954300	11954300	8553170	4	593,98,102,78,	0,2616,3541,4215,
#Partially deleted in new
chr1	11964687	11975538	chr1:11964687-11975538	0	+	11964687	11964687	8553170	5	98,114,66,105,256,	0,792,1563,2299,10595,
#Partially deleted in new
chr1	11964701	11966414	chr1:11964701-11966414	0	+	11964701	11964701	8553170	3	84,114,164,	0,778,1549,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	11971542	11975536	chr1:11971542-11975536	0	+	11971542	11971542	8553170	2	1455,884,	0,3110,
#Partially deleted in new
chr1	11980180	12013514	chr1:11980180-12013514	3	+	11989168	12011565	789624	18	304,179,136,163,125,109,108,154,68,122,127,105,103,221,156,197,135,2019,	0,8984,12374,15975,17116,18589,18807,21220,21588,21801,23811,24328,24644,25530,26357,26872,29411,31315,
#Partially deleted in new
chr1	11980298	11989234	chr1:11980298-11989234	0	+	11980298	11980298	8553170	4	186,44,145,70,	0,1511,1671,8866,
#Partially deleted in new
chr1	11980311	12013508	chr1:11980311-12013508	1	+	11989168	12011565	789624	19	173,145,179,136,163,125,109,108,154,68,122,127,105,103,221,156,197,135,2013,	0,1658,8853,12243,15844,16985,18458,18676,21089,21457,21670,23680,24197,24513,25399,26226,26741,29280,31184,
#Partially deleted in new
chr1	11980369	11989343	chr1:11980369-11989343	0	+	11980369	11980369	8553170	2	115,179,	0,8795,
#Partially deleted in new
chr1	11980434	11992640	chr1:11980434-11992640	0	+	11980434	11980434	8553170	5	50,145,179,185,86,	0,1535,8730,11844,12120,
#Partially deleted in new
chr1	11981991	11992673	chr1:11981991-11992673	0	+	11989168	11992673	789624	4	123,68,179,119,	0,531,7173,10563,
#Deleted in new
chr1	12017215	12017308	chr1:12017215-12017308	7	-	12017215	12017215	16724991	1	93,	0,
#Partially deleted in new
chr1	12019465	12032045	chr1:12019465-12032045	3	+	12021726	12031808	789624	10	87,196,348,85,109,59,130,97,138,324,	0,2179,2629,3367,9567,9757,10299,10562,11800,12256,
#Partially deleted in new
chr1	12019465	12029855	chr1:12019465-12029855	0	+	12019465	12019465	8553170	6	87,348,85,109,59,91,	0,2629,3367,9567,9757,10299,
#Partially deleted in new
chr1	12022221	12031975	chr1:12022221-12031975	0	+	12022221	12022221	8553170	6	221,85,109,902,138,254,	0,611,6811,7001,9044,9500,
#Partially deleted in new
chr1	12022863	12032043	chr1:12022863-12032043	0	+	12022863	12022863	8553170	6	54,109,672,97,138,322,	0,6169,6359,7164,8402,8858,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	12024011	12024124	chr1:12024011-12024124	3	-	12024011	12024011	8553170	1	113,	0,
#Deleted in new
chr1	12028720	12029607	chr1:12028720-12029607	0	+	12028720	12028720	8553170	2	421,385,	0,502,
#Partially deleted in new
chr1	12029095	12032025	chr1:12029095-12032025	0	+	12029095	12029095	8553170	6	46,59,130,97,138,485,	0,127,669,932,2170,2445,
#Deleted in new
chr1	12029157	12029222	chr1:12029157-12029222	3	+	12029157	12029157	5263520	1	65,	0,
#Deleted in new
chr1	12031126	12032039	chr1:12031126-12032039	0	+	12031126	12031126	8553170	2	277,318,	0,595,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	12036739	12037014	chr1:12036739-12037014	3	-	12036739	12036739	8553170	1	275,	0,
#Partially deleted in new
chr1	12063376	12144207	chr1:12063376-12144207	3	+	12063598	12142531	0	15	285,88,117,153,91,164,117,153,94,113,102,54,26,208,1921,	0,21087,33724,41002,46189,46664,48521,52200,59907,60338,62574,62806,72211,74852,78910,
#Partially deleted in new
chr1	12063376	12144205	chr1:12063376-12144205	1	+	12104443	12142531	0	14	285,117,153,91,164,117,153,94,113,102,54,26,205,1919,	0,33724,41002,46189,46664,48521,52200,59907,60338,62574,62806,72211,74855,78910,
#Partially deleted in new
chr1	12063469	12143117	chr1:12063469-12143117	0	+	12063598	12097205	789624	14	192,117,153,91,164,117,153,94,113,102,54,26,205,831,	0,33631,40909,46096,46571,48428,52107,59814,60245,62481,62713,72118,74762,78817,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	12077880	12077984	chr1:12077880-12077984	3	-	12077880	12077880	8553170	1	104,	0,
#Partially deleted in new
chr1	12080292	12080547	chr1:12080292-12080547	7	-	12080292	12080292	16724991	1	255,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	12088440	12092264	chr1:12088440-12092264	3	-	12088440	12088440	8553170	4	312,474,145,265,	0,579,2668,3559,
#Partially deleted in new
chr1	12125898	12144207	chr1:12125898-12144207	1	+	12138282	12142531	0	5	154,54,26,208,1921,	0,284,9689,12330,16388,
#Partially deleted in new
chr1	12125933	12144207	chr1:12125933-12144207	0	+	12125933	12125933	8553170	4	119,54,26,1921,	0,249,9654,16353,
#Deleted in new
chr1	12166942	12167038	chr1:12166942-12167038	3	+	12166942	12166942	5263520	1	96,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	12167002	12209228	chr1:12167002-12209228	3	+	12167091	12207020	0	10	167,100,129,150,94,236,78,35,205,2489,	0,21793,23954,24771,25428,25860,26952,27581,34964,39737,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	12167002	12209228	chr1:12167002-12209228	0	+	12167002	12167002	8553170	9	167,129,150,94,236,78,35,205,2489,	0,23954,24771,25428,25860,26952,27581,34964,39737,
#Partially deleted in new
chr1	12167002	12192358	chr1:12167002-12192358	1	+	12167091	12192358	789624	5	167,100,129,150,11,	0,21793,23954,24771,25345,
#Deleted in new
chr1	12191712	12191773	chr1:12191712-12191773	3	+	12191712	12191712	5263520	1	61,	0,
#Deleted in new
chr1	12191837	12193008	chr1:12191837-12193008	0	+	12191837	12191837	8553170	3	86,177,146,	0,510,1025,
#Partially deleted in new
chr1	12220793	12221109	chr1:12220793-12221109	7	-	12220793	12220793	16724991	1	316,	0,
#Partially deleted in new
chr1	12221147	12221271	chr1:12221147-12221271	3	-	12221147	12221147	8553170	1	124,	0,
#Partially deleted in new
chr1	12230029	12512047	chr1:12230029-12512047	3	+	12234266	12509024	789624	70	91,173,78,191,81,117,105,171,101,169,102,202,180,131,76,171,131,133,2214,152,1032,91,127,181,183,223,211,172,113,213,266,134,156,211,75,207,90,141,123,75,106,153,136,48,151,211,248,192,127,143,131,176,124,236,109,164,109,180,114,150,150,97,149,135,168,133,196,132,241,3155,	0,4161,12483,14216,14507,19193,23692,26303,26957,27905,30663,30918,31871,36851,37815,38676,40964,42973,45795,49469,52675,58193,60968,63494,69172,74476,78401,81424,81783,84085,88042,89467,91779,92506,93676,97618,99799,103196,105675,108201,111750,112869,115344,116575,118793,119134,123944,125869,126368,128429,132690,133042,138438,139437,143720,148398,149458,152946,155230,156155,170151,171578,173795,185057,186630,225968,230171,267470,276823,278863,
#Partially deleted in new
chr1	12230066	12512047	chr1:12230066-12512047	1	+	12234266	12509024	789624	69	54,173,78,191,81,117,105,171,101,169,102,202,180,131,76,171,131,133,2214,152,1032,91,127,181,183,223,211,172,113,213,266,134,156,211,75,207,90,141,123,106,153,136,48,151,211,248,192,127,143,131,176,124,236,109,164,109,180,114,150,150,97,149,135,168,133,196,132,241,3155,	0,4124,12446,14179,14470,19156,23655,26266,26920,27868,30626,30881,31834,36814,37778,38639,40927,42936,45758,49432,52638,58156,60931,63457,69135,74439,78364,81387,81746,84048,88005,89430,91742,92469,93639,97581,99762,103159,105638,111713,112832,115307,116538,118756,119097,123907,125832,126331,128392,132653,133005,138401,139400,143683,148361,149421,152909,155193,156118,170114,171541,173758,185020,186593,225931,230134,267433,276786,278826,
#Partially deleted in new
chr1	12244423	12249603	chr1:12244423-12249603	0	+	12244423	12244423	8553170	3	13,81,381,	0,113,4799,
#Partially deleted in new
chr1	12253733	12257955	chr1:12253733-12257955	0	+	12253733	12253733	8553170	4	93,228,101,21,	0,2542,3253,4201,
#Partially deleted in new
chr1	12277120	12510361	chr1:12277120-12510361	0	+	12277120	12509024	789624	52	918,152,1032,91,127,181,183,223,211,172,113,213,266,134,156,211,75,207,90,141,123,75,103,153,136,48,151,211,248,192,127,143,131,176,124,236,109,164,109,180,114,150,150,97,149,135,168,133,196,132,241,1469,	0,2378,5584,11102,13877,16403,22081,27385,31310,34333,34692,36994,40951,42376,44688,45415,46585,50527,52708,56105,58584,61110,64662,65778,68253,69484,71702,72043,76853,78778,79277,81338,85599,85951,91347,92346,96629,101307,102367,105855,108139,109064,123060,124487,126704,137966,139539,178877,183080,220379,229732,231772,
#Partially deleted in new
chr1	12283434	12373788	chr1:12283434-12373788	0	+	12283434	12362726	789624	34	302,91,127,181,183,223,211,172,113,213,266,134,156,211,75,207,90,141,123,75,103,153,136,48,151,211,248,192,127,131,176,124,236,39,	0,4788,7563,10089,15767,21071,24996,28019,28378,30680,34637,36062,38374,39101,40271,44213,46394,49791,52270,54796,58348,59464,61939,63170,65388,65729,70539,72464,72963,79285,79637,85033,86032,90315,
#Partially deleted in new
chr1	12299280	12373848	chr1:12299280-12373848	0	+	12299280	12299280	8553170	29	104,223,211,172,113,213,266,134,156,211,75,207,90,141,123,106,153,136,48,552,248,192,127,143,131,176,124,236,99,	0,5225,9150,12173,12532,14834,18791,20216,22528,23255,24425,28367,30548,33945,36424,42499,43618,46093,47324,49542,54693,56618,57117,59178,63439,63791,69187,70186,74469,
#Partially deleted in new
chr1	12311525	12337988	chr1:12311525-12337988	0	+	12311525	12311525	8553170	12	100,113,213,266,134,156,211,75,207,90,141,2284,	0,287,2589,6546,7971,10283,11010,12180,16122,18303,21700,24179,
#Partially deleted in new
chr1	12342804	12348973	chr1:12342804-12348973	0	+	12342804	12342804	8553170	4	247,136,48,151,	0,2569,3800,6018,
#Partially deleted in new
chr1	12344864	12349249	chr1:12344864-12349249	0	+	12344864	12344864	8553170	5	146,136,48,151,86,	0,509,1740,3958,4299,
#Partially deleted in new
chr1	12356350	12510346	chr1:12356350-12510346	0	+	12356350	12356350	8553170	21	174,131,176,124,236,109,164,109,180,114,150,150,97,149,135,168,133,196,132,241,1454,	0,6369,6721,12117,13116,17399,22077,23137,26625,28909,29834,43830,45257,47474,58736,60309,99647,103850,141149,150502,152542,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	12367669	12512047	chr1:12367669-12512047	0	+	12367669	12367669	8553170	19	32,124,236,109,164,109,180,114,150,150,97,149,135,168,74,157,132,241,3155,	0,798,1797,6080,10758,11818,15306,17590,18515,32511,33938,36155,47417,48990,88328,92570,129830,139183,141223,
#Partially deleted in new
chr1	12382995	12509030	chr1:12382995-12509030	0	+	12382995	12453880	789624	14	160,114,150,150,97,149,135,168,61,133,196,132,241,138,	0,2264,3189,17185,18612,20829,32091,33664,70843,73002,77205,114504,123857,125897,
#Partially deleted in new
chr1	12400309	12403948	chr1:12400309-12403948	0	+	12400309	12402587	789624	4	21,97,135,124,	0,1298,2258,3515,
#Partially deleted in new
chr1	12407253	12416827	chr1:12407253-12416827	0	+	12407253	12407253	8553170	3	77,135,168,	0,7833,9406,
#Partially deleted in new
chr1	12409837	12416827	chr1:12409837-12416827	0	+	12409837	12409837	8553170	3	57,135,168,	0,5249,6822,
#Partially deleted in new
chr1	12464939	12512047	chr1:12464939-12512047	1	+	12507090	12509024	789624	4	310,132,241,3155,	0,32560,41913,43953,
#Partially deleted in new
chr1	12478548	12506972	chr1:12478548-12506972	0	+	12478548	12478548	8553170	3	325,132,120,	0,18951,28304,
#Partially deleted in new
chr1	12497097	12507163	chr1:12497097-12507163	0	+	12497097	12497097	8553170	3	111,132,311,	0,402,9755,
#Partially deleted in new
chr1	12497225	12506907	chr1:12497225-12506907	0	+	12497225	12497225	8553170	2	406,55,	0,9627,
#Deleted in new
chr1	12507245	12507397	chr1:12507245-12507397	3	+	12507245	12507245	789624	1	152,	0,
#Partially deleted in new
chr1	12527723	12528420	chr1:12527723-12528420	3	+	12527723	12527723	8553170	2	69,369,	0,328,
#Partially deleted in new
chr1	12567909	12617731	chr1:12567909-12617731	3	-	12568339	12617348	789624	6	515,126,239,120,144,578,	0,4818,10808,11383,12613,49244,
#Partially deleted in new
chr1	12568391	12616795	chr1:12568391-12616795	0	-	12568391	12580606	789624	4	33,126,144,236,	0,4336,12131,48168,
#Deleted in new
chr1	12569971	12570072	chr1:12569971-12570072	3	-	12569971	12569971	8553170	1	101,	0,
#Partially deleted in new
chr1	12578717	12596308	chr1:12578717-12596308	0	-	12578717	12580606	789624	4	239,120,144,323,	0,575,1805,17268,
#Deleted in new
chr1	12578956	12579023	chr1:12578956-12579023	3	-	12578956	12578956	5263520	1	67,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	12579767	12616696	chr1:12579767-12616696	0	-	12579767	12579767	8553170	2	899,137,	0,36792,
#Deleted in new
chr1	12618899	12619244	chr1:12618899-12619244	3	-	12618899	12618899	8553170	1	345,	0,
#Partially deleted in new
chr1	12644546	12667086	chr1:12644546-12667086	3	+	12644546	12666735	789624	4	168,217,64,1126,	0,6576,17244,21414,
#Deleted in new
chr1	12692908	12693020	chr1:12692908-12693020	7	+	12692908	12692908	16724991	1	112,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	12716114	12728759	chr1:12716114-12728759	0	+	12716114	12716114	789624	3	230,64,3538,	0,4768,9107,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	12716142	12728400	chr1:12716142-12728400	3	+	12716176	12725996	789624	4	202,217,64,3179,	0,3332,4740,9079,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	12746214	12763699	chr1:12746214-12763699	3	+	12746430	12760951	789624	4	327,114,178,2930,	0,9485,13095,14555,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	12746386	12753926	chr1:12746386-12753926	0	+	12746386	12746386	8553170	2	155,569,	0,6971,
#Partially deleted in new
chr1	12746424	12761169	chr1:12746424-12761169	1	+	12746430	12760951	789624	3	117,178,400,	0,12885,14345,
#Deleted in new
chr1	12774840	12777906	chr1:12774840-12777906	3	+	12774867	12777599	789624	3	314,576,896,	0,702,2170,
#Partially deleted in new
chr1	12791396	12796628	chr1:12791396-12796628	3	+	12793227	12795996	789624	4	78,312,579,1191,	0,1806,2518,4041,
#Deleted in new
chr1	12794690	12796485	chr1:12794690-12796485	0	+	12794690	12794690	8553170	2	279,1048,	0,747,
#Deleted in new
chr1	12822685	12823159	chr1:12822685-12823159	3	-	12822685	12822685	8553170	2	254,124,	0,350,
#Partially deleted in new
chr1	12824604	12831410	chr1:12824604-12831410	3	-	12824941	12828789	789624	4	899,582,309,55,	0,2644,3892,6751,
#Partially deleted in new
chr1	12838124	12841357	chr1:12838124-12841357	7	-	12838124	12838124	16724991	4	80,477,577,283,	0,358,1977,2950,
#Partially deleted in new
chr1	12847407	12848725	chr1:12847407-12848725	3	-	12847407	12848289	789624	2	1063,45,	0,1273,
#Partially deleted in new
chr1	12857085	12861909	chr1:12857085-12861909	3	+	12859009	12861779	789624	4	62,312,579,689,	0,1899,2607,4135,
#Partially deleted in new
chr1	12879223	12886201	chr1:12879223-12886201	3	-	12879543	12883394	789624	4	882,582,309,55,	0,2630,3878,6923,
#Partially deleted in new
chr1	12892895	12898270	chr1:12892895-12898270	3	-	12892915	12895847	789624	4	579,579,312,55,	0,1690,2665,5320,
#Deleted in new
chr1	12916609	12920482	chr1:12916609-12920482	3	+	12917692	12920413	789624	4	98,287,576,631,	0,1083,1752,3242,
#Deleted in new
chr1	12917624	12920480	chr1:12917624-12920480	1	+	12917692	12920413	789624	3	355,576,629,	0,737,2227,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	12922553	12922660	chr1:12922553-12922660	3	+	12922553	12922553	8553170	1	107,	0,
#Deleted in new
chr1	12926161	12928253	chr1:12926161-12928253	7	+	12926161	12926161	16724991	2	580,559,	0,1533,
#Partially deleted in new
chr1	12938471	12947580	chr1:12938471-12947580	3	-	12938674	12942518	789624	4	765,582,309,64,	0,2512,3760,9045,
#Partially deleted in new
chr1	12938471	12945416	chr1:12938471-12945416	1	-	12938674	12942518	789624	4	765,582,309,64,	0,2512,3760,6881,
#Deleted in new
chr1	13029338	13032130	chr1:13029338-13032130	7	+	13029338	13029338	16724991	3	312,579,559,	0,708,2233,
#Partially deleted in new
chr1	13049475	13056491	chr1:13049475-13056491	3	-	13049807	13053659	789624	4	894,582,309,78,	0,2642,3891,6938,
#Deleted in new
chr1	13060868	13062229	chr1:13060868-13062229	3	+	13061324	13062206	789624	2	62,1086,	0,275,
#Partially deleted in new
chr1	13068676	13077884	chr1:13068676-13077884	3	+	13073693	13077552	789624	4	78,309,582,894,	0,5001,5982,8314,
#Partially deleted in new
chr1	13070852	13077884	chr1:13070852-13077884	1	+	13073693	13077552	789624	4	55,309,582,894,	0,2825,3806,6138,
#Deleted in new
chr1	13095178	13097971	chr1:13095178-13097971	7	-	13095178	13095178	16724991	3	584,576,287,	0,1534,2506,
#Deleted in new
chr1	13104402	13105689	chr1:13104402-13105689	7	-	13104402	13104402	16724991	2	579,312,	0,975,
#Partially deleted in new
chr1	13115495	13116854	chr1:13115495-13116854	3	-	13115518	13116400	789624	2	1086,62,	0,1297,
#Deleted in new
chr1	13128817	13131615	chr1:13128817-13131615	7	+	13128817	13128817	16724991	3	287,576,589,	0,683,2209,
#Deleted in new
chr1	13129792	13131409	chr1:13129792-13131409	4	+	13129792	13129792	16724991	2	284,383,	0,1234,
#Deleted in new
chr1	13146980	13147460	chr1:13146980-13147460	3	-	13146980	13146980	8553170	2	260,124,	0,356,
#Partially deleted in new
chr1	13148904	13155961	chr1:13148904-13155961	3	-	13149236	13153095	5263520	4	894,582,309,78,	0,2644,3898,6979,
#Deleted in new
chr1	13164585	13165467	chr1:13164585-13165467	3	-	13164585	13165467	789624	1	882,	0,
#Partially deleted in new
chr1	13172454	13179464	chr1:13172454-13179464	3	+	13175280	13179132	789624	4	78,309,582,894,	0,2810,3786,6116,
#Deleted in new
chr1	13196329	13198130	chr1:13196329-13198130	1	-	13196822	13197982	789624	2	1052,279,	0,1522,
#Partially deleted in new
chr1	13196744	13201409	chr1:13196744-13201409	3	-	13196822	13199589	789624	4	637,579,312,78,	0,1583,2558,4587,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	13222704	13226106	chr1:13222704-13226106	3	-	13223331	13226106	789624	3	1201,579,287,	0,2150,3115,
#Partially deleted in new
chr1	13245862	13248652	chr1:13245862-13248652	7	+	13245862	13245862	16724991	3	287,576,508,	0,683,2282,
#Partially deleted in new
chr1	13254211	13263314	chr1:13254211-13263314	3	+	13259268	13263111	789624	4	64,309,582,765,	0,5035,6010,8338,
#Deleted in new
chr1	13273538	13275627	chr1:13273538-13275627	7	-	13273538	13273538	16724991	2	573,495,	0,1594,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	13279124	13279231	chr1:13279124-13279231	3	-	13279124	13279124	8553170	1	107,	0,
#Deleted in new
chr1	13281034	13285154	chr1:13281034-13285154	3	-	13281370	13284091	789624	4	898,576,312,58,	0,1812,2770,4062,
#Deleted in new
chr1	13281167	13284169	chr1:13281167-13284169	1	-	13281370	13284091	789624	3	765,576,365,	0,1679,2637,
#Deleted in new
chr1	13281301	13285174	chr1:13281301-13285174	1	-	13281370	13284091	789624	4	631,576,287,98,	0,1545,2503,3775,
#Partially deleted in new
chr1	13303538	13308907	chr1:13303538-13308907	3	+	13305954	13308887	789624	4	48,312,579,579,	0,2391,3099,4790,
#Partially deleted in new
chr1	13315580	13322598	chr1:13315580-13322598	3	+	13318407	13322264	789624	4	78,309,582,896,	0,2811,3791,6122,
#Deleted in new
chr1	13324038	13324518	chr1:13324038-13324518	3	+	13324038	13324038	8553170	2	124,260,	0,220,
#Deleted in new
chr1	13342033	13343840	chr1:13342033-13343840	0	-	13342033	13342033	8553170	2	1053,279,	0,1528,
#Partially deleted in new
chr1	13342365	13347134	chr1:13342365-13347134	3	-	13342527	13345314	789624	4	721,579,312,78,	0,1672,2662,4691,
#Partially deleted in new
chr1	13369066	13371900	chr1:13369066-13371900	3	-	13369066	13371900	789624	3	574,579,287,	0,1582,2547,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	13389631	13392629	chr1:13389631-13392629	3	+	13389657	13392502	789624	3	313,579,686,	0,709,2312,
#Partially deleted in new
chr1	13410449	13421328	chr1:13410449-13421328	3	+	13416354	13421258	789624	4	95,291,579,632,	0,5901,7672,10247,
#Partially deleted in new
chr1	13416350	13421328	chr1:13416350-13421328	1	+	13416354	13421258	789624	3	291,579,632,	0,1771,4346,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	13474976	13514048	chr1:13474976-13514048	3	-	13475845	13513593	789624	2	1123,1086,	0,37986,
#Deleted in new
chr1	13513219	13516270	chr1:13513219-13516270	3	+	13513219	13513219	8553170	3	122,254,101,	0,1071,2950,
#Partially deleted in new
chr1	13555000	13555694	chr1:13555000-13555694	7	+	13555000	13555000	16724991	2	289,82,	0,612,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	13583464	13617957	chr1:13583464-13617957	3	+	13583805	13615911	0	6	636,134,130,39,112,2053,	0,23708,26922,30222,30835,32440,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	13583756	13617953	chr1:13583756-13617953	1	+	13583805	13615911	0	6	344,134,130,39,112,2049,	0,23416,26630,29930,30543,32148,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	13583761	13617957	chr1:13583761-13617957	1	+	13583805	13615911	0	6	339,134,130,39,106,2053,	0,23411,26625,29925,30538,32143,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	13583830	13617957	chr1:13583830-13617957	1	+	13584033	13615911	0	6	270,134,130,39,112,2053,	0,23342,26556,29856,30469,32074,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	13583831	13607221	chr1:13583831-13607221	0	+	13583831	13595840	789624	3	269,158,49,	0,11995,23341,
#Partially deleted in new
chr1	13583832	13614514	chr1:13583832-13614514	1	+	13584033	13614415	789624	5	268,134,130,39,215,	0,23340,26554,29854,30467,
#Partially deleted in new
chr1	13584092	13615964	chr1:13584092-13615964	1	+	13584136	13615911	789624	6	96,134,130,39,112,60,	0,23080,26294,29594,30207,31812,
#Partially deleted in new
chr1	13584266	13616782	chr1:13584266-13616782	1	+	13607231	13615911	0	6	75,134,130,39,112,878,	0,22906,26120,29420,30033,31638,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	13584269	13616564	chr1:13584269-13616564	1	+	13607231	13615911	0	7	72,158,134,130,39,112,660,	0,11557,22903,26117,29417,30030,31635,
#Partially deleted in new
chr1	13585460	13615917	chr1:13585460-13615917	1	+	13607231	13615911	0	6	179,134,130,39,112,13,	0,21712,24926,28226,28839,30444,
#Partially deleted in new
chr1	13585471	13616247	chr1:13585471-13616247	1	+	13607231	13615911	0	6	97,134,130,39,106,343,	0,21701,24915,28215,28828,30433,
#Partially deleted in new
chr1	13585479	13616259	chr1:13585479-13616259	0	+	13607231	13614317	789624	5	160,134,39,106,355,	0,21693,28207,28820,30425,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	13623183	13623284	chr1:13623183-13623284	7	-	13623183	13623183	16724991	1	101,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	13657310	13659910	chr1:13657310-13659910	3	-	13657310	13657310	8553170	2	45,334,	0,2266,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	13696069	13696199	chr1:13696069-13696199	3	-	13696069	13696069	8553170	1	130,	0,
#Partially deleted in new
chr1	13700197	13749463	chr1:13700197-13749463	0	+	13715605	13749463	789624	6	103,74,118,77,153,103,	0,15343,30802,32581,41807,49163,
#Partially deleted in new
chr1	13700239	13825065	chr1:13700239-13825065	1	+	13715605	13823184	0	8	61,74,118,104,153,127,144,1907,	0,15301,30760,32539,41765,49121,116187,122919,
#Partially deleted in new
chr1	13704854	13825079	chr1:13704854-13825079	3	+	13715605	13816547	0	10	791,74,118,104,153,127,111,4414,144,1921,	0,10686,26145,27924,37150,44506,68223,73563,111572,118304,
#Partially deleted in new
chr1	13704854	13788059	chr1:13704854-13788059	1	+	13715605	13786527	0	9	791,74,118,104,153,127,111,4414,1545,	0,10686,26145,27924,37150,44506,68223,73563,81660,
#Partially deleted in new
chr1	13731017	13787067	chr1:13731017-13787067	0	+	13731017	13742039	789624	6	100,153,127,56,111,553,	0,10987,18343,38100,42060,55497,
#Partially deleted in new
chr1	13738749	13773188	chr1:13738749-13773188	0	+	13738749	13738749	8553170	4	191,153,127,111,	0,3255,10611,34328,
#Partially deleted in new
chr1	13738784	13773126	chr1:13738784-13773126	0	+	13738784	13738784	8553170	5	156,153,127,56,49,	0,3220,10576,30333,34293,
#Partially deleted in new
chr1	13749402	13788079	chr1:13749402-13788079	1	+	13773169	13786527	0	4	85,111,4414,1565,	0,23675,29015,37112,
#Partially deleted in new
chr1	13749414	13787657	chr1:13749414-13787657	1	+	13773169	13786527	0	5	73,56,111,4414,1143,	0,19703,23663,29003,37100,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	13749423	13773671	chr1:13749423-13773671	0	+	13749423	13749423	8553170	2	64,594,	0,23654,
#Partially deleted in new
chr1	13749434	13823499	chr1:13749434-13823499	1	+	13773169	13823184	789624	5	53,56,111,144,341,	0,19683,23643,66992,73724,
#Partially deleted in new
chr1	13749435	13778632	chr1:13749435-13778632	0	+	13773169	13778632	789624	4	52,135,111,215,	0,19603,23642,28982,
#Partially deleted in new
chr1	13749435	13823419	chr1:13749435-13823419	1	+	13773169	13823184	789624	4	52,111,144,261,	0,23642,66991,73723,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	13771725	13778463	chr1:13771725-13778463	0	+	13773169	13778463	789624	3	489,111,46,	0,1352,6692,
#Partially deleted in new
chr1	13892791	15118043	chr1:13892791-15118043	1	+	13893665	15114635	789624	17	965,158,241,192,137,171,190,131,51,124,206,119,232,102,167,115,3573,	0,287643,706191,1067892,1141957,1151197,1163299,1167380,1170780,1172838,1201388,1202023,1208751,1210567,1211231,1219635,1221679,
#Partially deleted in new
chr1	13892791	14304663	chr1:13892791-14304663	1	+	13893665	14304658	789624	3	965,158,74,	0,287643,411798,
#Deleted in new
chr1	14124232	14124335	chr1:14124232-14124335	3	-	14124232	14124232	8553170	1	103,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	14221890	14223118	chr1:14221890-14223118	3	-	14221890	14221890	8553170	2	217,65,	0,1163,
#Partially deleted in new
chr1	14598703	15118043	chr1:14598703-15118043	3	+	14598997	15114635	789624	15	520,192,137,171,190,131,51,124,206,119,232,102,167,115,3573,	0,361980,436045,445285,457387,461468,464868,466926,495476,496111,502839,504655,505319,513723,515767,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	14598703	15066560	chr1:14598703-15066560	0	+	14598703	14598703	8553170	7	520,192,137,171,190,3451,931,	0,361980,436045,445285,457387,461468,466926,
#Partially deleted in new
chr1	14598716	15065797	chr1:14598716-15065797	1	+	14598997	15065797	789624	9	194,241,192,137,171,190,131,51,168,	0,266,361967,436032,445272,457374,461455,464855,466913,
#Partially deleted in new
chr1	14692128	14692613	chr1:14692128-14692613	7	-	14692128	14692128	16724991	2	279,47,	0,438,
#Partially deleted in new
chr1	14924129	15068152	chr1:14924129-15068152	1	+	14924364	15065797	789624	8	443,192,137,171,190,131,51,2523,	0,36554,110619,119859,131961,136042,139442,141500,
#Partially deleted in new
chr1	14929799	15056145	chr1:14929799-15056145	0	+	14960739	15056145	789624	5	245,192,137,171,55,	0,30884,104949,114189,126291,
#Partially deleted in new
chr1	14929799	15068155	chr1:14929799-15068155	1	+	14960739	15065797	789624	8	245,192,137,171,190,131,51,2526,	0,30884,104949,114189,126291,130372,133772,135830,
#Partially deleted in new
chr1	14945918	15065797	chr1:14945918-15065797	1	+	14960739	15065797	789624	8	255,192,137,171,190,131,51,168,	0,14765,88830,98070,110172,114253,117653,119711,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	15111814	15152464	chr1:15111814-15152464	3	-	15111814	15111814	789624	6	5993,578,121,88,146,174,	0,6512,8762,9157,12413,40476,
#Partially deleted in new
chr1	15115951	15152402	chr1:15115951-15152402	0	-	15115951	15115951	8553170	5	1856,578,88,146,112,	0,2375,5020,8276,36339,
#Partially deleted in new
chr1	15115980	15153237	chr1:15115980-15153237	0	-	15115980	15115980	8553170	3	1827,146,947,	0,8247,36310,
#Partially deleted in new
chr1	15152531	15220477	chr1:15152531-15220477	3	+	15215087	15219743	789624	3	253,537,1152,	0,62363,66794,
#Partially deleted in new
chr1	15152565	15220339	chr1:15152565-15220339	1	+	15215087	15219743	789624	4	219,73,537,1014,	0,57924,62329,66760,
#Partially deleted in new
chr1	15152576	15219346	chr1:15152576-15219346	0	+	15215087	15219346	789624	3	208,537,21,	0,62318,66749,
#Partially deleted in new
chr1	15153732	15220408	chr1:15153732-15220408	1	+	15215087	15219743	789624	3	222,537,1083,	0,61162,65593,
#Partially deleted in new
chr1	15153767	15220393	chr1:15153767-15220393	1	+	15215087	15219393	789624	4	187,73,537,1064,	0,56722,61127,65562,
#Partially deleted in new
chr1	15153788	15220480	chr1:15153788-15220480	1	+	15215087	15219743	789624	4	166,73,537,1155,	0,56701,61106,65537,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	15164343	15171317	chr1:15164343-15171317	3	-	15164343	15164343	8553170	2	118,137,	0,6837,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	15168473	15171317	chr1:15168473-15171317	1	-	15168473	15168473	8553170	2	304,137,	0,2707,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	15191827	15192845	chr1:15191827-15192845	7	-	15191827	15191827	16724991	2	614,96,	0,922,
#Partially deleted in new
chr1	15226372	15227549	chr1:15226372-15227549	7	+	15226372	15226372	16724991	2	871,95,	0,1082,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr1	15247271	15398126	chr1:15247271-15398126	3	+	15251784	15397413	789624	31	124,107,207,268,110,237,124,131,90,105,108,84,153,196,158,108,108,108,108,174,226,85,107,160,133,130,128,96,221,166,830,	0,4499,25051,42127,49412,53933,61341,65785,69106,70552,77180,79787,81005,82074,94464,97811,98144,101770,105605,110838,113206,115370,118555,120191,122098,127230,128331,133429,133959,134756,150025,
#Partially deleted in new
chr1	15247279	15296762	chr1:15247279-15296762	0	+	15247279	15296762	789624	4	116,107,268,79,	0,4491,42119,49404,
#Partially deleted in new
chr1	15251784	15397529	chr1:15251784-15397529	1	+	15251784	15397413	789624	30	93,207,268,110,237,124,131,90,105,108,84,153,196,158,108,108,108,108,174,226,85,107,160,133,130,128,96,221,166,233,	0,20538,37614,44899,49420,56828,61272,64593,66039,72667,75274,76492,77561,89951,93298,93631,97257,101092,106325,108693,110857,114042,115678,117585,122717,123818,128916,129446,130243,145512,
#Partially deleted in new
chr1	15287044	15289641	chr1:15287044-15289641	0	+	15287044	15287044	8553170	2	113,243,	0,2354,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	15312104	15315239	chr1:15312104-15315239	0	+	15312104	15312104	8553170	4	83,131,157,193,	0,952,2337,2942,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	15324468	15330008	chr1:15324468-15330008	0	+	15324468	15324468	8553170	2	2674,1732,	0,3808,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	15326679	15343876	chr1:15326679-15343876	3	-	15326679	15326679	789624	2	3004,101,	0,17096,
#Partially deleted in new
chr1	15326816	15329734	chr1:15326816-15329734	0	+	15326816	15326816	8553170	3	326,153,389,	0,1460,2529,
#Partially deleted in new
chr1	15327119	15397516	chr1:15327119-15397516	0	+	15327119	15327119	8553170	24	23,153,196,71,158,108,108,108,108,174,226,85,107,160,133,127,128,96,221,166,247,81,54,220,	0,1157,2226,12361,14616,17963,18296,21922,25757,30990,33358,35522,38707,40343,42250,47385,48483,53581,54111,54908,56036,60931,64090,70177,
#Deleted in new
chr1	15334165	15335464	chr1:15334165-15335464	3	-	15334165	15334165	8553170	2	534,193,	0,1106,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	15341760	15384558	chr1:15341760-15384558	0	+	15341760	15383158	789624	16	128,108,108,108,174,226,85,107,160,133,130,128,96,221,166,1403,	0,3322,3655,11116,16349,18717,20881,24066,25702,27609,32741,33842,38940,39470,40267,41395,
#Partially deleted in new
chr1	15345097	15397741	chr1:15345097-15397741	0	+	15345097	15397413	789624	16	93,108,108,174,226,85,107,160,133,130,128,96,221,166,54,445,	0,318,7779,13012,15380,17544,20729,22365,24272,29404,30505,35603,36133,36930,46112,52199,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	15345430	15398126	chr1:15345430-15398126	0	+	15345430	15397413	789624	14	93,108,174,226,85,107,160,133,130,128,96,221,166,830,	0,7446,12679,15047,17211,20396,22032,23939,29071,30172,35270,35800,36597,51866,
#Partially deleted in new
chr1	15345459	15360623	chr1:15345459-15360623	0	+	15345459	15345459	8553170	4	147,108,174,146,	0,7417,12650,15018,
#Partially deleted in new
chr1	15357790	15364317	chr1:15357790-15364317	0	+	15357790	15357790	8553170	4	493,226,85,577,	0,2687,4851,5950,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	15362696	15398127	chr1:15362696-15398127	0	+	15362696	15388380	789624	14	30,107,160,133,130,128,96,221,166,124,81,77,54,831,	0,3130,4766,6673,11805,12906,18004,18534,19331,21110,25354,25649,28513,34600,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	15375699	15400283	chr1:15375699-15400283	0	+	15375699	15375699	8553170	9	31,96,221,166,81,77,118,153,330,	0,5001,5531,6328,12351,12646,17400,21597,24254,
#Partially deleted in new
chr1	15381279	15397529	chr1:15381279-15397529	0	+	15381279	15381279	8553170	4	172,166,122,233,	0,748,1879,16017,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	15383376	15397529	chr1:15383376-15397529	0	+	15383376	15383376	8553170	4	26,55,54,233,	0,430,7833,13920,
#Partially deleted in new
chr1	15391146	15400283	chr1:15391146-15400283	0	+	15391146	15391146	8553170	3	117,153,187,	0,6150,8950,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	15402978	15409433	chr1:15402978-15409433	3	-	15402978	15402978	8553170	3	4929,102,147,	0,6091,6308,
#Partially deleted in new
chr1	15409894	15430343	chr1:15409894-15430343	3	+	15409971	15428724	0	4	385,148,135,1751,	0,15976,17255,18698,
#Partially deleted in new
chr1	15410264	15429081	chr1:15410264-15429081	0	+	15410264	15428720	789624	5	15,148,135,112,489,	0,15606,16885,17633,18328,
#Partially deleted in new
chr1	15438438	15446654	chr1:15438438-15446654	3	+	15438464	15446589	0	8	66,92,98,126,137,146,153,80,	0,1861,2054,4008,4980,6167,7158,8136,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	15438441	15449242	chr1:15438441-15449242	1	+	15438464	15443462	789624	5	63,126,137,153,2668,	0,4005,4977,7155,8133,
#Partially deleted in new
chr1	15438452	15443540	chr1:15438452-15443540	0	+	15438452	15438452	8553170	3	52,126,122,	0,3994,4966,
#Partially deleted in new
chr1	15440349	15446654	chr1:15440349-15446654	0	+	15440349	15440349	8553170	6	42,98,126,137,153,80,	0,143,2097,3069,5247,6225,
#Partially deleted in new
chr1	15456727	15463011	chr1:15456727-15463011	0	+	15456727	15456727	8553170	4	66,89,98,279,	0,358,4833,6005,
#Partially deleted in new
chr1	15456728	15472091	chr1:15456728-15472091	3	+	15456753	15472007	789624	8	65,89,98,129,137,146,153,102,	0,357,4832,6004,6657,9270,10657,15261,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	15456746	15457623	chr1:15456746-15457623	0	+	15456746	15456746	8553170	2	47,538,	0,339,
#Partially deleted in new
chr1	15465908	15483368	chr1:15465908-15483368	0	+	15465908	15465908	8553170	6	236,153,89,98,129,105,	0,1477,10548,15189,16356,17355,
#Partially deleted in new
chr1	15476100	15491400	chr1:15476100-15491400	3	+	15476125	15491312	789624	8	65,89,98,129,137,146,153,106,	0,356,4997,6164,7163,9800,11184,15194,
#Partially deleted in new
chr1	15476464	15482357	chr1:15476464-15482357	0	+	15476464	15482357	789624	4	81,98,105,93,	0,4633,5180,5800,
#Partially deleted in new
chr1	15485860	15491395	chr1:15485860-15491395	0	+	15485860	15485860	8553170	3	186,153,101,	0,1424,5434,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	15490831	15524445	chr1:15490831-15524445	1	-	15493783	15524200	789624	8	3170,180,148,90,177,35,286,377,	0,4441,13779,15158,16067,17041,27278,33237,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	15492269	15524295	chr1:15492269-15524295	3	-	15492942	15524200	0	9	766,110,180,148,90,177,35,286,227,	0,1622,3003,12341,13720,14629,15603,25840,31799,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	15492269	15524347	chr1:15492269-15524347	1	-	15492942	15524200	0	5	766,110,180,286,279,	0,1622,3003,25840,31799,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	15492365	15524192	chr1:15492365-15524192	0	-	15507121	15524192	789624	9	670,110,180,148,90,235,35,286,124,	0,1526,2907,12245,13624,14533,15507,25744,31703,
#Partially deleted in new
chr1	15492797	15507052	chr1:15492797-15507052	0	-	15492942	15507052	789624	5	238,110,148,90,154,	0,1094,11813,13192,14101,
#Partially deleted in new
chr1	15492854	15524726	chr1:15492854-15524726	1	-	15492942	15518278	0	9	181,110,180,148,90,177,35,286,144,	0,1037,2418,11756,13135,14044,15018,25255,31728,
#Partially deleted in new
chr1	15492942	15524200	chr1:15492942-15524200	0	-	15507897	15524200	789624	9	93,110,180,148,90,177,35,146,132,	0,949,2330,11668,13047,13956,14930,25307,31126,
#Partially deleted in new
chr1	15495272	15524889	chr1:15495272-15524889	0	-	15495272	15518278	789624	7	180,148,90,177,35,286,38,	0,9338,10717,11626,12600,22837,29579,
#Partially deleted in new
chr1	15504624	15524217	chr1:15504624-15524217	0	-	15504624	15524200	789624	5	134,177,35,286,149,	0,2274,3248,13485,19444,
#Partially deleted in new
chr1	15507771	15524215	chr1:15507771-15524215	0	-	15507771	15507771	8553170	3	136,286,147,	0,10338,16297,
#Partially deleted in new
chr1	15526812	15566595	chr1:15526812-15566595	1	+	15529105	15566190	789624	13	146,185,67,340,185,105,159,131,184,183,77,81,514,	0,2275,7424,9662,17586,19954,21457,32713,35329,37116,37470,39106,39269,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	15526812	15571733	chr1:15526812-15571733	3	+	15529105	15568177	789624	15	146,185,67,340,185,105,159,131,184,183,77,81,99,171,3956,	0,2275,7424,9662,17586,19954,21457,32713,35329,37116,37470,39106,39269,40286,40965,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	15526812	15576092	chr1:15526812-15576092	1	+	15529105	15574778	789624	15	146,185,67,340,185,105,159,131,184,183,77,81,99,171,1333,	0,2275,7424,9662,17586,19954,21457,32713,35329,37116,37470,39106,39269,40286,47947,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	15526812	15571733	chr1:15526812-15571733	0	+	15529105	15566190	789624	15	146,185,67,340,185,105,159,131,184,183,77,81,329,171,3956,	0,2275,7424,9662,17586,19954,21457,32713,35329,37116,37470,39106,39269,40286,40965,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	15526812	15571731	chr1:15526812-15571731	1	+	15548341	15568177	789624	14	146,67,340,185,105,159,131,184,183,77,81,99,171,3954,	0,7424,9662,17586,19954,21457,32713,35329,37116,37470,39106,39269,40286,40965,
#Partially deleted in new
chr1	15542164	15542304	chr1:15542164-15542304	3	+	15542164	15542164	789624	1	140,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	15559607	15592379	chr1:15559607-15592379	0	+	15559607	15559607	8553170	14	49,199,184,183,77,272,81,329,171,458,195,390,138,121,	0,523,2534,4321,4675,5574,6311,6474,7491,8170,9169,15152,15727,32651,
#Partially deleted in new
chr1	15564085	15567141	chr1:15564085-15567141	0	+	15564085	15566190	789624	5	26,77,81,218,43,	0,197,1833,1996,3013,
#Deleted in new
chr1	15565610	15565956	chr1:15565610-15565956	3	-	15565610	15565610	8553170	1	346,	0,
#Deleted in new
chr1	15565817	15566409	chr1:15565817-15566409	0	+	15565817	15565817	8553170	2	182,328,	0,264,
#Deleted in new
chr1	15567045	15568061	chr1:15567045-15568061	0	+	15567045	15567045	8553170	2	224,284,	0,732,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	15568158	15570281	chr1:15568158-15570281	0	+	15568158	15568158	8553170	2	77,629,	0,1494,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	15572352	15585110	chr1:15572352-15585110	3	-	15573650	15584967	789624	7	1372,85,180,196,49,203,415,	0,2404,5332,6506,7741,10840,12343,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	15586135	15603626	chr1:15586135-15603626	3	-	15586135	15586135	8553170	2	2307,538,	0,16953,
#Partially deleted in new
chr1	15604596	15605043	chr1:15604596-15605043	7	+	15604596	15604596	16724991	1	447,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	15608077	15608145	chr1:15608077-15608145	3	-	15608077	15608077	8553170	1	68,	0,
#Deleted in new
chr1	15614642	15614867	chr1:15614642-15614867	7	-	15614642	15614642	16724991	1	225,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	15617499	15669044	chr1:15617499-15669044	3	+	15617670	15656633	0	10	309,130,237,127,128,129,104,190,63,9208,	0,9169,12825,15939,20807,26022,32220,34206,39117,42337,
#Partially deleted in new
chr1	15617542	15634306	chr1:15617542-15634306	0	+	15617542	15617542	8553170	4	266,130,237,868,	0,9126,12782,15896,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	15617614	15627066	chr1:15617614-15627066	0	+	15617614	15617614	8553170	2	194,398,	0,9054,
#Partially deleted in new
chr1	15630401	15661057	chr1:15630401-15661057	0	+	15630401	15633810	789624	8	160,127,82,129,104,190,63,1221,	0,3037,3396,13120,19318,21304,26215,29435,
#Partially deleted in new
chr1	15630424	15649823	chr1:15630424-15649823	0	+	15630424	15643567	789624	4	137,127,129,104,	0,3014,13097,19295,
#Partially deleted in new
chr1	15651835	15656985	chr1:15651835-15656985	0	+	15651835	15651835	8553170	2	60,565,	0,4585,
#Partially deleted in new
chr1	15659868	15661722	chr1:15659868-15661722	3	+	15659868	15661722	789624	1	1854,	0,
#Deleted in new
chr1	15682872	15683128	chr1:15682872-15683128	3	-	15682872	15682872	8553170	1	256,	0,
#Partially deleted in new
chr1	15684331	15734769	chr1:15684331-15734769	3	+	15684558	15733934	0	20	287,107,110,100,88,187,60,229,819,70,91,65,89,133,191,66,160,180,117,973,	0,31905,32375,33561,34206,35402,36997,40985,42682,43747,43935,44337,44770,45465,46200,46860,47557,48018,48280,49465,
#Partially deleted in new
chr1	15684389	15734769	chr1:15684389-15734769	1	+	15684558	15733934	789624	19	229,107,110,100,88,187,229,819,70,91,65,89,133,191,66,160,180,117,973,	0,31847,32317,33503,34148,35344,40927,42624,43689,43877,44279,44712,45407,46142,46802,47499,47960,48222,49407,
#Partially deleted in new
chr1	15684540	15719869	chr1:15684540-15719869	0	+	15684540	15684540	8553170	5	78,107,100,88,136,	0,31696,33352,33997,35193,
#Partially deleted in new
chr1	15684555	15734769	chr1:15684555-15734769	1	+	15684558	15733934	789624	21	63,107,110,100,88,187,60,229,55,641,70,91,65,89,133,191,66,160,180,117,973,	0,31681,32151,33337,33982,35178,36773,40761,42458,42636,43523,43711,44113,44546,45241,45976,46636,47333,47794,48056,49241,
#Partially deleted in new
chr1	15720311	15732452	chr1:15720311-15732452	0	-	15720311	15720311	8553170	4	284,183,151,66,	0,500,2891,12075,
#Partially deleted in new
chr1	15720736	15732452	chr1:15720736-15732452	0	-	15720736	15720736	8553170	4	258,151,280,66,	0,2466,4856,11650,
#Partially deleted in new
chr1	15722718	15736896	chr1:15722718-15736896	3	-	15722718	15722718	8553170	4	349,85,175,36,	0,484,9668,14142,
#Partially deleted in new
chr1	15729844	15734115	chr1:15729844-15734115	0	+	15729844	15729844	8553170	7	85,191,66,99,180,117,319,	0,687,1347,2105,2505,2767,3952,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	15736404	15741396	chr1:15736404-15741396	3	+	15736485	15739406	789624	5	459,66,153,135,2173,	0,1524,1688,2189,2819,
#Partially deleted in new
chr1	15737782	15739335	chr1:15737782-15739335	0	+	15737782	15737782	8553170	4	212,153,135,112,	0,310,811,1441,
#Partially deleted in new
chr1	15739034	15739562	chr1:15739034-15739562	0	+	15739034	15739034	8553170	2	63,339,	0,189,
#Partially deleted in new
chr1	15742421	15747982	chr1:15742421-15747982	3	+	15742559	15747632	789624	6	226,73,175,421,188,437,	0,413,598,1738,4445,5124,
#Partially deleted in new
chr1	15742546	15744580	chr1:15742546-15744580	0	+	15742546	15742546	8553170	3	101,175,421,	0,473,1613,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	15756606	15765073	chr1:15756606-15765073	0	+	15764983	15765073	789624	4	126,182,193,110,	0,1567,7886,8357,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	15756616	15765086	chr1:15756616-15765086	0	+	15764983	15765086	789624	4	116,182,190,123,	0,1557,7879,8347,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	15756640	15765217	chr1:15756640-15765217	0	+	15764983	15765217	789624	4	88,182,52,254,	0,1533,7855,8323,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	15756643	15765035	chr1:15756643-15765035	0	+	15764983	15765035	789624	4	89,156,190,72,	0,1530,7852,8320,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	15756658	15786594	chr1:15756658-15786594	3	+	15764983	15784661	0	10	74,156,193,270,188,103,170,179,118,2047,	0,1515,7834,8305,10717,11869,13750,17959,20511,27889,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	15757945	15765027	chr1:15757945-15765027	0	+	15764983	15765027	789624	4	98,156,193,64,	0,228,6547,7018,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	15757946	15765076	chr1:15757946-15765076	0	+	15764983	15765076	789624	4	97,182,190,113,	0,227,6549,7017,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	15758418	15786594	chr1:15758418-15786594	1	+	15764983	15784661	0	9	430,190,270,188,103,170,179,118,2047,	0,6077,6545,8957,10109,11990,16199,18751,26129,
#Partially deleted in new
chr1	15758783	15767559	chr1:15758783-15767559	0	+	15764983	15767559	789624	4	65,52,270,184,	0,5712,6180,8592,
#Partially deleted in new
chr1	15758792	15774631	chr1:15758792-15774631	0	+	15764983	15774631	789624	5	56,52,270,170,14,	0,5703,6171,11616,15825,
#Partially deleted in new
chr1	15758796	15767437	chr1:15758796-15767437	0	+	15764983	15767437	789624	4	52,193,270,62,	0,5696,6167,8579,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	15764498	15775242	chr1:15764498-15775242	1	+	15764983	15775031	0	6	187,270,188,103,170,625,	0,465,2877,4029,5910,10119,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	15764952	15785329	chr1:15764952-15785329	1	+	15764983	15784661	0	5	281,170,179,118,782,	0,5456,9665,12217,19595,
#Partially deleted in new
chr1	15777014	15784685	chr1:15777014-15784685	0	+	15777014	15777014	8553170	3	64,118,138,	0,155,7533,
#Partially deleted in new
chr1	15777072	15784838	chr1:15777072-15784838	0	+	15777072	15777072	8553170	2	215,291,	0,7475,
#Deleted in new
chr1	15792795	15793285	chr1:15792795-15793285	7	+	15792795	15792795	16724991	1	490,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	15807168	15809348	chr1:15807168-15809348	3	-	15807373	15807649	789624	1	2180,	0,
#Partially deleted in new
chr1	15828231	15828669	chr1:15828231-15828669	7	+	15828231	15828231	16724991	1	438,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	15834473	15848147	chr1:15834473-15848147	3	-	15834473	15834473	5263520	2	2433,40,	0,13634,
#Partially deleted in new
chr1	15847863	15940460	chr1:15847863-15940460	3	+	15848067	15939427	0	15	287,321,477,161,201,152,126,114,114,101,8176,483,195,159,1165,	0,24952,28338,61457,63237,68264,71062,71540,73006,74385,80227,89299,89948,90854,91432,
#Partially deleted in new
chr1	15873501	15911301	chr1:15873501-15911301	0	+	15874114	15911301	789624	4	894,477,161,201,	0,2700,35819,37599,
#Deleted in new
chr1	15873501	15876711	chr1:15873501-15876711	0	+	15873501	15873501	8553170	2	894,510,	0,2700,
#Partially deleted in new
chr1	15876575	15920906	chr1:15876575-15920906	0	+	15876575	15920906	789624	7	103,158,201,152,126,114,37,	0,32748,34525,39552,42350,42828,44294,
#Partially deleted in new
chr1	15917697	15917908	chr1:15917697-15917908	7	-	15917697	15917697	16724991	1	211,	0,
#Deleted in new
chr1	15938582	15939544	chr1:15938582-15939544	0	+	15938582	15938582	8553170	2	294,249,	0,713,
#Partially deleted in new
chr1	15941868	15976126	chr1:15941868-15976126	3	-	15941968	15948495	0	16	384,90,210,131,121,117,88,301,143,266,126,141,189,207,87,144,	0,462,660,1195,1530,1730,1939,2431,2828,3068,3846,4285,5066,6422,31170,34114,
#Deleted in new
chr1	15941868	15943089	chr1:15941868-15943089	0	-	15941968	15943089	789624	4	384,111,210,26,	0,462,660,1195,
#Deleted in new
chr1	15941868	15942722	chr1:15941868-15942722	0	-	15941868	15941868	8553170	2	384,392,	0,462,
#Partially deleted in new
chr1	15941870	15976132	chr1:15941870-15976132	1	-	15941968	15948495	0	16	382,111,210,131,121,117,88,301,143,266,126,141,189,207,87,150,	0,460,658,1193,1528,1728,1937,2429,2826,3066,3844,4283,5064,6420,31168,34112,
#Partially deleted in new
chr1	15941870	15976079	chr1:15941870-15976079	1	-	15941968	15947060	0	15	382,90,210,131,121,117,88,301,143,266,126,163,189,87,97,	0,460,658,1193,1528,1728,1937,2429,2826,3066,3844,4283,5064,31168,34112,
#Deleted in new
chr1	15942406	15944428	chr1:15942406-15944428	0	-	15942406	15944428	789624	6	14,210,131,121,117,129,	0,122,657,992,1192,1893,
#Deleted in new
chr1	15942755	15943384	chr1:15942755-15943384	0	-	15942755	15942755	8553170	2	146,321,	0,308,
#Deleted in new
chr1	15943239	15944358	chr1:15943239-15944358	0	-	15943239	15943239	8553170	4	280,117,88,59,	0,359,568,1060,
#Deleted in new
chr1	15943256	15943926	chr1:15943256-15943926	0	-	15943256	15943256	8553170	2	263,328,	0,342,
#Deleted in new
chr1	15943428	15944393	chr1:15943428-15944393	0	-	15943428	15943428	8553170	3	91,117,586,	0,170,379,
#Deleted in new
chr1	15943598	15944403	chr1:15943598-15944403	0	-	15943598	15943598	8553170	2	297,104,	0,701,
#Deleted in new
chr1	15944416	15946084	chr1:15944416-15946084	0	-	15944416	15944416	8553170	4	184,143,266,370,	0,280,520,1298,
#Deleted in new
chr1	15944987	15947105	chr1:15944987-15947105	0	-	15944987	15944987	8553170	4	215,126,163,171,	0,727,1166,1947,
#Deleted in new
chr1	15945720	15947292	chr1:15945720-15947292	0	-	15945720	15945720	8553170	4	120,141,88,136,	0,433,1214,1436,
#Partially deleted in new
chr1	15945845	15976104	chr1:15945845-15976104	0	-	15945845	15945845	8553170	5	449,189,207,87,122,	0,1089,2445,27193,30137,
#Partially deleted in new
chr1	15945932	15952973	chr1:15945932-15952973	0	-	15945932	15945932	8553170	4	362,189,207,64,	0,1002,2358,6977,
#Deleted in new
chr1	15969631	15970194	chr1:15969631-15970194	7	+	15969631	15969631	16724991	1	563,	0,
#Partially deleted in new
chr1	15988181	15988441	chr1:15988181-15988441	7	+	15988181	15988181	16724991	1	260,	0,
#Deleted in new
chr1	15989139	15989375	chr1:15989139-15989375	7	-	15989139	15989139	16724991	1	236,	0,
#Deleted in new
chr1	15989870	15994751	chr1:15989870-15994751	7	+	15989870	15989870	16724991	8	121,95,66,100,148,181,181,70,	0,800,1280,1807,2292,3425,3690,4811,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	16004235	16008807	chr1:16004235-16008807	3	+	16004303	16006346	789624	2	150,2889,	0,1683,
#Deleted in new
chr1	16006159	16006671	chr1:16006159-16006671	3	-	16006159	16006159	8553170	2	187,279,	0,233,
#Deleted in new
chr1	16014027	16018790	chr1:16014027-16018790	3	-	16015579	16017963	789624	3	1732,134,1026,	0,3046,3737,
#Partially deleted in new
chr1	16014027	16019594	chr1:16014027-16019594	1	-	16015579	16019469	789624	4	1732,134,88,461,	0,3046,3737,5106,
#Deleted in new
chr1	16014027	16018041	chr1:16014027-16018041	1	-	16015579	16017963	789624	3	1732,119,277,	0,3061,3737,
#Deleted in new
chr1	16014027	16018043	chr1:16014027-16018043	0	-	16014027	16014027	8553170	2	1732,970,	0,3046,
#Deleted in new
chr1	16015373	16017825	chr1:16015373-16017825	0	-	16015579	16017825	789624	3	386,134,61,	0,1715,2391,
#Deleted in new
chr1	16015373	16018073	chr1:16015373-16018073	1	-	16015579	16017963	789624	3	386,149,309,	0,1700,2391,
#Deleted in new
chr1	16015498	16018005	chr1:16015498-16018005	1	-	16015579	16017963	789624	3	261,146,241,	0,1575,2266,
#Partially deleted in new
chr1	16018874	16034050	chr1:16018874-16034050	0	+	16018874	16018874	8553170	24	100,198,64,217,73,107,129,33,140,78,79,126,85,102,126,174,70,111,214,134,89,84,87,440,	0,1161,2156,2422,3116,3738,4925,5984,7233,7661,7822,8435,8946,9143,9845,10251,10856,11090,11586,12835,13328,13568,14295,14736,
#Deleted in new
chr1	16021029	16021737	chr1:16021029-16021737	0	+	16021029	16021029	8553170	3	65,217,118,	0,267,590,
#Partially deleted in new
chr1	16021870	16034050	chr1:16021870-16034050	1	+	16022619	16033658	0	21	48,73,107,129,129,140,78,79,126,85,102,85,174,70,111,214,134,89,81,87,440,	0,120,742,1929,2892,4237,4665,4826,5439,5950,6147,6890,7255,7860,8094,8590,9839,10332,10575,11299,11740,
#Partially deleted in new
chr1	16021912	16026596	chr1:16021912-16026596	0	+	16021912	16021912	8553170	6	151,107,129,129,150,61,	0,700,1887,2850,4195,4623,
#Partially deleted in new
chr1	16022013	16033663	chr1:16022013-16033663	1	+	16022619	16033658	0	19	50,107,129,140,78,79,126,85,102,85,174,70,111,214,134,89,84,87,53,	0,599,1786,4094,4522,4683,5296,5807,6004,6747,7112,7717,7951,8447,9696,10189,10429,11156,11597,
#Partially deleted in new
chr1	16022051	16034050	chr1:16022051-16034050	3	+	16022619	16033658	0	20	12,107,129,129,140,78,79,126,85,102,85,174,70,111,214,134,89,84,87,440,	0,561,1748,2711,4056,4484,4645,5258,5769,5966,6709,7074,7679,7913,8409,9658,10151,10391,11118,11559,
#Partially deleted in new
chr1	16026838	16030075	chr1:16026838-16030075	0	+	16026838	16026838	8553170	8	71,126,85,102,85,174,70,111,	0,471,982,1179,1922,2287,2892,3126,
#Partially deleted in new
chr1	16035177	16040029	chr1:16035177-16040029	7	-	16035177	16035177	16724991	5	281,111,182,94,36,	0,1058,1434,4425,4816,
#Partially deleted in new
chr1	16043735	16057285	chr1:16043735-16057285	1	+	16044492	16057285	789624	14	145,107,129,129,140,78,11,85,174,70,111,214,52,99,	0,750,1822,2799,4169,4607,4768,6780,7139,7742,7974,8462,9903,13451,
#Partially deleted in new
chr1	16043776	16057308	chr1:16043776-16057308	3	+	16044492	16056916	789624	20	104,107,129,129,140,78,79,126,85,102,85,174,70,111,214,134,89,84,87,440,	0,709,1781,2758,4128,4566,4727,5343,5841,6038,6739,7098,7701,7933,8421,9862,11658,11898,12645,13092,
#Partially deleted in new
chr1	16048788	16057308	chr1:16048788-16057308	1	+	16048971	16056916	789624	13	457,85,102,85,174,70,111,214,134,89,81,87,440,	0,829,1026,1727,2086,2689,2921,3409,4850,6646,6889,7633,8080,
#Partially deleted in new
chr1	16052322	16057308	chr1:16052322-16057308	0	+	16052322	16057285	789624	5	89,134,89,81,71,	0,1316,3112,3355,4915,
#Partially deleted in new
chr1	16057768	16073626	chr1:16057768-16073626	3	-	16058436	16073442	789624	7	949,111,183,94,36,116,206,	0,1725,2100,4330,4730,5752,15652,
#Partially deleted in new
chr1	16058278	16073632	chr1:16058278-16073632	0	-	16058278	16058278	8553170	6	439,111,183,94,36,212,	0,1215,1590,3820,4220,15142,
#Partially deleted in new
chr1	16124336	16156087	chr1:16124336-16156087	3	-	16125214	16155932	0	17	984,156,194,150,210,62,189,126,56,100,154,116,333,156,670,68,240,	0,5097,5889,7384,7727,8041,8843,9144,9523,10131,10699,11318,13516,13938,24041,26559,31511,
#Deleted in new
chr1	16133012	16133562	chr1:16133012-16133562	0	-	16133012	16133012	8553170	2	356,82,	0,468,
#Partially deleted in new
chr1	16134559	16146450	chr1:16134559-16146450	0	-	16134559	16134559	8553170	6	8,154,116,333,156,28,	0,476,1095,3293,3715,11863,
#Partially deleted in new
chr1	16148377	16156052	chr1:16148377-16156052	0	-	16148377	16148377	8553170	2	670,205,	0,7470,
#Deleted in new
chr1	16155210	16157329	chr1:16155210-16157329	3	+	16155210	16155210	8553170	2	545,359,	0,1760,
#Partially deleted in new
chr1	16159265	16161883	chr1:16159265-16161883	3	+	16159265	16159265	8553170	2	161,383,	0,2235,
#Deleted in new
chr1	16197853	16198357	chr1:16197853-16198357	3	+	16197853	16197853	8553170	2	363,76,	0,428,
#Partially deleted in new
chr1	16197853	16207011	chr1:16197853-16207011	0	-	16197853	16197853	8553170	11	891,105,80,125,161,90,75,130,153,161,64,	0,1296,3928,4562,6905,7233,7497,7684,8077,8326,9094,
#Partially deleted in new
chr1	16198103	16212609	chr1:16198103-16212609	3	-	16198586	16209054	789624	16	641,105,80,159,161,90,75,130,153,161,263,77,103,282,441,108,	0,1046,3678,4312,6655,6983,7247,7434,7827,8076,8844,9418,9571,9840,10539,14398,
#Partially deleted in new
chr1	16204810	16206543	chr1:16204810-16206543	0	-	16204810	16206543	789624	6	109,90,75,130,153,364,	0,276,540,727,1120,1369,
#Partially deleted in new
chr1	16204899	16206526	chr1:16204899-16206526	0	-	16204899	16204899	8553170	5	20,90,75,153,347,	0,187,451,1031,1280,
#Partially deleted in new
chr1	16205626	16206982	chr1:16205626-16206982	0	-	16205626	16205626	8553170	3	457,161,35,	0,553,1321,
#Partially deleted in new
chr1	16205848	16206526	chr1:16205848-16206526	0	-	16205926	16206526	789624	2	235,347,	0,331,
#Partially deleted in new
chr1	16215908	16217160	chr1:16215908-16217160	5	-	16215908	16215908	16724991	3	153,141,34,	0,560,1218,
#Partially deleted in new
chr1	16216456	16217328	chr1:16216456-16217328	4	-	16216456	16216456	16724991	2	153,202,	0,670,
#Partially deleted in new
chr1	16216468	16228027	chr1:16216468-16228027	7	-	16216468	16216468	16724991	17	141,97,118,141,126,37,95,21,67,65,63,303,65,56,120,99,106,	0,658,1231,1659,1909,2112,2599,2937,3745,4354,4588,8718,9121,9338,9481,9776,11453,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	16231699	16237162	chr1:16231699-16237162	3	-	16232047	16236742	789624	5	598,137,125,153,532,	0,810,1193,1912,4931,
#Partially deleted in new
chr1	16232280	16236659	chr1:16232280-16236659	0	-	16232280	16236659	789624	4	17,137,153,29,	0,229,1331,4350,
#Partially deleted in new
chr1	16241212	16241398	chr1:16241212-16241398	7	-	16241212	16241212	16724991	1	186,	0,
#Partially deleted in new
chr1	16246838	16352454	chr1:16246838-16352454	3	-	16250669	16315418	789624	10	4947,117,57,97,111,154,135,117,267,200,	0,5449,6257,6796,8872,9767,47944,58964,68330,105416,
#Deleted in new
chr1	16251081	16253593	chr1:16251081-16253593	0	-	16251081	16253170	789624	4	704,117,86,38,	0,1206,2014,2474,
#Deleted in new
chr1	16251081	16253427	chr1:16251081-16253427	0	-	16251081	16253170	789624	3	704,117,332,	0,1206,2014,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	16292313	16315367	chr1:16292313-16315367	0	-	16292313	16292313	8553170	3	2604,117,199,	0,13489,22855,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	16352574	16393355	chr1:16352574-16393355	0	+	16352574	16352574	8553170	3	238,124,128,	0,725,40653,
#Partially deleted in new
chr1	16367082	16398142	chr1:16367082-16398142	3	+	16367257	16395140	789624	4	226,50,255,3105,	0,24292,26145,27955,
#Partially deleted in new
chr1	16367087	16395406	chr1:16367087-16395406	1	+	16367257	16395140	789624	4	221,50,252,369,	0,24287,26143,27950,
#Partially deleted in new
chr1	16367224	16398145	chr1:16367224-16398145	1	+	16367264	16395140	789624	3	84,255,3108,	0,26003,27813,
#Partially deleted in new
chr1	16367234	16395139	chr1:16367234-16395139	0	+	16367234	16367234	8553170	5	74,71,50,252,102,	0,19820,24140,25996,27803,
#Partially deleted in new
chr1	16367242	16395172	chr1:16367242-16395172	0	+	16367242	16367242	8553170	5	66,77,50,255,135,	0,23307,24132,25985,27795,
#Partially deleted in new
chr1	16367242	16393385	chr1:16367242-16393385	0	+	16367264	16387712	789624	4	66,293,50,158,	0,20259,24132,25985,
#Partially deleted in new
chr1	16367246	16395390	chr1:16367246-16395390	0	+	16367246	16367246	8553170	5	62,71,50,255,353,	0,19808,24128,25981,27791,
#Partially deleted in new
chr1	16367264	16398142	chr1:16367264-16398142	1	+	16367264	16395140	789624	3	44,252,3105,	0,25966,27773,
#Partially deleted in new
chr1	16367710	16395273	chr1:16367710-16395273	0	+	16367710	16367710	8553170	4	305,50,252,236,	0,23664,25520,27327,
#Deleted in new
chr1	16369149	16369530	chr1:16369149-16369530	7	-	16369149	16369149	16724991	1	381,	0,
#Partially deleted in new
chr1	16387116	16403974	chr1:16387116-16403974	0	-	16387294	16403974	789624	5	185,178,173,118,7,	0,12227,13603,16610,16851,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	16395680	16437393	chr1:16395680-16437393	0	-	16395680	16395680	8553170	17	632,189,178,154,173,118,72,138,208,86,443,138,284,208,152,180,266,	0,877,3663,4801,5039,8046,8287,9286,12817,13437,13920,15097,26230,29843,32183,35562,41447,
#Partially deleted in new
chr1	16398642	16437424	chr1:16398642-16437424	3	-	16398764	16431371	789624	13	180,178,173,118,72,138,86,443,49,61,85,135,297,	0,701,2077,5084,5325,6324,10475,10958,22866,23268,32695,34147,38485,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	16398666	16437190	chr1:16398666-16437190	1	-	16398764	16410852	789624	11	156,178,173,118,72,138,86,443,138,208,63,	0,677,2053,5060,5301,6300,10451,10934,12111,26857,38461,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	16424903	16437416	chr1:16424903-16437416	1	-	16425096	16431371	789624	5	307,208,152,180,289,	0,620,2960,6339,12224,
#Partially deleted in new
chr1	16440671	16460078	chr1:16440671-16460078	3	+	16440761	16458890	789624	8	182,101,105,82,109,178,76,1237,	0,2960,7198,7388,8421,11166,15146,18170,
#Partially deleted in new
chr1	16440720	16459008	chr1:16440720-16459008	1	+	16440761	16458890	789624	6	133,105,109,178,76,167,	0,7149,8372,11117,15097,18121,
#Partially deleted in new
chr1	16440723	16459073	chr1:16440723-16459073	1	+	16440761	16458890	789624	8	52,101,105,82,109,178,76,232,	0,2908,7146,7336,8369,11114,15094,18118,
#Partially deleted in new
chr1	16440735	16460077	chr1:16440735-16460077	1	+	16440761	16458996	789624	7	118,101,105,82,109,178,1236,	0,2896,7134,7324,8357,11102,18106,
#Partially deleted in new
chr1	16440735	16441619	chr1:16440735-16441619	0	+	16440735	16440735	8553170	2	118,454,	0,430,
#Partially deleted in new
chr1	16440736	16452015	chr1:16440736-16452015	0	+	16440761	16449100	789624	6	117,101,105,109,117,178,	0,2895,7133,8356,9388,11101,
#Partially deleted in new
chr1	16440741	16448350	chr1:16440741-16448350	0	+	16440741	16440741	8553170	5	112,101,73,82,102,	0,2890,7128,7318,7507,
#Partially deleted in new
chr1	16440742	16460077	chr1:16440742-16460077	0	+	16440761	16458890	789624	9	111,101,105,82,109,178,76,221,804,	0,2889,7127,7317,8350,11095,15075,18099,18531,
#Partially deleted in new
chr1	16440755	16458956	chr1:16440755-16458956	0	+	16440761	16450220	789624	9	98,101,105,82,109,117,178,76,115,	0,2876,7114,7304,8337,9369,11082,15062,18086,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	16440757	16460077	chr1:16440757-16460077	0	+	16440757	16440757	8553170	7	96,101,105,82,2923,76,1236,	0,2874,7112,7302,8335,15060,18084,
#Partially deleted in new
chr1	16440771	16459008	chr1:16440771-16459008	0	+	16440771	16449100	789624	6	82,101,109,178,76,167,	0,2860,8321,11066,15046,18070,
#Partially deleted in new
chr1	16455520	16459018	chr1:16455520-16459018	0	+	16455520	16455520	8553170	2	373,177,	0,3321,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	16460947	16468481	chr1:16460947-16468481	3	+	16460947	16460947	789624	2	2340,905,	0,6629,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	16467435	16492701	chr1:16467435-16492701	7	-	16467435	16467435	16724991	15	2692,238,106,145,183,200,232,84,97,236,166,62,75,131,721,	0,8389,8963,9494,10819,15851,16797,17387,18133,18990,23182,23429,23574,23750,24545,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	16468921	16491082	chr1:16468921-16491082	4	-	16468921	16468921	16724991	12	86,238,106,145,183,200,232,97,107,166,62,73,	0,6903,7477,8008,9333,14365,15311,16647,20763,21696,21943,22088,
#Partially deleted in new
chr1	16475915	16491307	chr1:16475915-16491307	5	-	16475915	16475915	16724991	14	140,106,145,183,200,232,84,97,236,109,166,62,85,102,	0,483,1014,2339,7371,8317,8907,9653,10510,13768,14702,14949,15094,15290,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	16476929	16483341	chr1:16476929-16483341	4	-	16476929	16476929	16724991	2	1508,55,	0,6357,
#Partially deleted in new
chr1	16490633	16499257	chr1:16490633-16499257	5	-	16490633	16490633	16724991	4	150,62,307,55,	0,231,376,8569,
#Partially deleted in new
chr1	16490645	16499257	chr1:16490645-16499257	5	-	16490645	16490645	16724991	3	138,62,55,	0,219,8557,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	16514644	16515754	chr1:16514644-16515754	3	+	16514644	16514644	8553170	1	1110,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	16515033	16521788	chr1:16515033-16521788	3	+	16515033	16515033	8553170	3	1277,56,225,	0,5698,6530,
#Deleted in new
chr1	16520693	16521796	chr1:16520693-16521796	3	+	16520693	16520693	8553170	2	94,233,	0,870,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	16533885	16535649	chr1:16533885-16535649	0	-	16533885	16533885	789624	2	324,1224,	0,540,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	16534080	16534224	chr1:16534080-16534224	3	-	16534080	16534080	8553170	1	144,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	16535341	16536172	chr1:16535341-16536172	7	-	16535341	16535341	16724991	2	435,393,	0,438,
#Partially deleted in new
chr1	16548650	16552531	chr1:16548650-16552531	7	-	16548650	16548650	16724991	3	236,529,117,	0,2050,3764,
#Partially deleted in new
chr1	16562318	16613487	chr1:16562318-16613487	3	-	16563942	16592021	789624	29	1868,112,173,52,173,52,164,52,206,73,215,103,210,212,73,215,103,210,212,73,215,103,210,155,127,70,79,272,150,	0,2488,3314,4089,4860,5660,6754,10823,12168,12838,13948,14998,16874,18426,19101,20225,21275,23170,24731,25406,26530,27580,29528,29840,31122,32273,32612,46189,51019,
#Partially deleted in new
chr1	16564017	16613487	chr1:16564017-16613487	1	-	16564017	16592021	789624	29	169,59,169,52,173,52,164,52,206,73,215,103,210,212,73,215,103,210,212,73,215,103,210,155,127,70,79,272,150,	0,789,1619,2390,3161,3961,5055,9124,10469,11139,12249,13299,15175,16727,17402,18526,19576,21471,23032,23707,24831,25881,27829,28141,29423,30574,30913,44490,49320,
#Partially deleted in new
chr1	16564852	16604934	chr1:16564852-16604934	0	-	16582717	16592021	789624	19	66,173,52,173,52,164,52,206,73,215,103,210,212,73,215,210,155,124,144,	0,780,1555,2326,3126,4220,8289,9634,10304,11414,12464,14340,15892,16567,17691,26994,27306,39388,39938,
#Partially deleted in new
chr1	16593561	16608650	chr1:16593561-16608650	0	-	16593561	16593561	8553170	4	192,70,83,143,	0,1030,1369,14946,
#Partially deleted in new
chr1	16599588	16613562	chr1:16599588-16613562	0	-	16599588	16599588	8553170	3	2255,272,225,	0,8919,13749,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	16599602	16603049	chr1:16599602-16603049	0	-	16599602	16599602	8553170	1	3447,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	16605405	16613534	chr1:16605405-16613534	0	-	16605405	16605405	8553170	3	2286,272,197,	0,3102,7932,
#Deleted in new
chr1	16617390	16617729	chr1:16617390-16617729	3	+	16617390	16617390	8553170	1	339,	0,
#Partially deleted in new
chr1	16618252	16626386	chr1:16618252-16626386	5	-	16618252	16618252	16724991	4	851,180,231,34,	0,1592,7522,8100,
#Partially deleted in new
chr1	16618255	16631109	chr1:16618255-16631109	4	-	16618255	16618255	16724991	7	848,401,231,147,145,183,220,	0,1589,7519,8097,8889,10212,12634,
#Partially deleted in new
chr1	16618255	16628652	chr1:16618255-16628652	4	-	16618255	16618255	16724991	6	848,194,231,147,145,185,	0,1589,7519,8097,8889,10212,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	16618272	16644686	chr1:16618272-16644686	4	-	16618272	16618272	16724991	13	831,231,147,145,183,220,84,97,252,142,84,118,41,	0,7502,8080,8872,10195,12617,13257,14002,14822,16754,24494,24755,26373,
#Partially deleted in new
chr1	16618968	16657232	chr1:16618968-16657232	7	-	16618968	16618968	16724991	18	135,180,170,128,195,231,147,145,183,111,220,84,97,252,166,62,81,186,	0,876,2977,4901,5304,6806,7384,8176,9499,11063,11921,12561,13306,14126,37535,37765,37905,38078,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	16625374	16644672	chr1:16625374-16644672	4	-	16625374	16625374	16724991	10	631,147,145,183,220,84,97,252,118,27,	0,978,1770,3093,5515,6155,6900,7720,17653,19271,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	16629669	16644683	chr1:16629669-16644683	4	-	16629669	16629669	16724991	6	1440,84,97,252,118,38,	0,1860,2605,3425,13358,14976,
#Deleted in new
chr1	16642766	16643109	chr1:16642766-16643109	7	-	16642766	16642766	16724991	2	84,82,	0,261,
#Deleted in new
chr1	16645621	16650289	chr1:16645621-16650289	7	+	16645621	16645621	16724991	18	57,147,113,115,137,121,119,169,131,103,233,37,121,78,147,107,140,216,	0,747,975,1165,1358,1576,1841,2162,2446,2677,2810,3134,3259,3552,3757,3985,4188,4452,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	16656878	16667524	chr1:16656878-16667524	3	+	16656878	16656878	8553170	3	96,137,584,	0,8512,10062,
#Partially deleted in new
chr1	16681096	16688749	chr1:16681096-16688749	7	-	16681096	16681096	16724991	5	131,533,117,196,374,	0,615,5542,6230,7279,
#Deleted in new
chr1	16685620	16686055	chr1:16685620-16686055	7	-	16685620	16685620	16724991	1	435,	0,
#Partially deleted in new
chr1	16687338	16692309	chr1:16687338-16692309	5	-	16687338	16687338	16724991	3	184,182,205,	0,3774,4766,
#Partially deleted in new
chr1	16691217	16720157	chr1:16691217-16720157	7	-	16691217	16691217	16724991	11	77,264,146,196,162,272,202,132,183,187,194,	0,5213,5561,8208,8641,11483,12725,16070,16327,16674,28746,
#Partially deleted in new
chr1	16706923	16710619	chr1:16706923-16710619	4	-	16706923	16706923	16724991	3	804,187,180,	0,968,3516,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	16739937	16750589	chr1:16739937-16750589	3	-	16739937	16739937	8553170	3	586,137,96,	0,1999,10556,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	16740272	16941434	chr1:16740272-16941434	0	+	16740272	16740272	8553170	9	125,62,166,237,97,84,234,200,663,	0,190013,190156,196364,197368,198127,198636,199621,200499,
#Partially deleted in new
chr1	16740279	16750968	chr1:16740279-16750968	7	+	16740279	16740279	16724991	2	118,455,	0,10234,
#Deleted in new
chr1	16750232	16750964	chr1:16750232-16750964	5	+	16750232	16750232	16724991	4	189,81,60,168,	0,281,440,564,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	16754909	16758872	chr1:16754909-16758872	5	-	16754909	16754909	16724991	8	2484,140,107,147,78,121,37,70,	0,2608,2844,3032,3306,3556,3765,3893,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	16755306	16764480	chr1:16755306-16764480	4	-	16755306	16755306	16724991	15	2087,140,107,147,121,233,103,131,211,119,121,137,123,148,67,	0,2211,2447,2635,3159,3496,3759,3962,4169,4582,4845,5047,5444,5648,9107,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	16757127	16759291	chr1:16757127-16759291	4	-	16757127	16757127	16724991	6	266,140,107,770,366,23,	0,390,626,814,1675,2141,
#Deleted in new
chr1	16757231	16764480	chr1:16757231-16764480	5	-	16757231	16757231	16724991	17	162,140,107,147,78,121,37,233,103,131,211,119,121,137,123,148,67,	0,286,522,710,984,1234,1443,1571,1834,2037,2244,2657,2920,3122,3519,3723,7182,
#Deleted in new
chr1	16758052	16758823	chr1:16758052-16758823	4	-	16758052	16758052	16724991	3	534,37,21,	0,622,750,
#Partially deleted in new
chr1	16760836	16770237	chr1:16760836-16770237	7	-	16760836	16760836	16724991	4	37,148,127,247,	0,118,7305,9154,
#Deleted in new
chr1	16851256	16852799	chr1:16851256-16852799	0	-	16851256	16851256	8553170	3	221,295,38,	0,818,1505,
#Deleted in new
chr1	16851320	16853129	chr1:16851320-16853129	3	-	16851320	16851320	8553170	4	157,150,295,133,	0,253,754,1676,
#Partially deleted in new
chr1	16855406	16859284	chr1:16855406-16859284	7	+	16855406	16855406	16724991	3	117,529,236,	0,1305,3642,
#Deleted in new
chr1	16858948	16859021	chr1:16858948-16859021	3	-	16858948	16858948	5263520	1	73,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	16870944	16874079	chr1:16870944-16874079	0	+	16870944	16870944	8553170	2	2163,357,	0,2778,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	16871760	16872591	chr1:16871760-16872591	7	+	16871760	16871760	16724991	2	393,435,	0,396,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	16872257	16874041	chr1:16872257-16874041	0	+	16872257	16872257	8553170	2	85,349,	0,1435,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	16872283	16874044	chr1:16872283-16874044	0	+	16872283	16872283	8553170	2	1224,322,	0,1439,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	16873038	16874092	chr1:16873038-16874092	0	+	16873038	16873038	8553170	2	105,370,	0,684,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	16873707	16873851	chr1:16873707-16873851	3	+	16873707	16873707	8553170	1	144,	0,
#Deleted in new
chr1	16888537	16889373	chr1:16888537-16889373	3	-	16888537	16888537	789624	2	248,158,	0,678,
#Deleted in new
chr1	16888541	16889642	chr1:16888541-16889642	0	-	16888541	16888541	8553170	2	241,95,	0,1006,
#Deleted in new
chr1	16888541	16889649	chr1:16888541-16889649	0	-	16888541	16888541	789624	2	244,102,	0,1006,
#Deleted in new
chr1	16889094	16889602	chr1:16889094-16889602	7	+	16889094	16889094	16724991	1	508,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	16904338	16904776	chr1:16904338-16904776	3	-	16904338	16904338	8553170	1	438,	0,
#Partially deleted in new
chr1	16921949	16972979	chr1:16921949-16972979	3	+	16922018	16972446	789624	37	129,136,155,186,84,62,166,107,237,97,84,234,200,183,145,147,231,194,128,170,180,135,144,239,160,168,373,170,121,164,216,225,150,201,132,183,620,	0,713,2375,7896,8174,8336,8479,9341,14687,15691,16450,16959,17944,22150,23512,24309,24811,26381,26849,29003,31352,32273,32784,33362,34047,36633,38808,43773,44049,44458,46253,47166,47835,48303,48686,49515,50410,
#Partially deleted in new
chr1	16922754	16961078	chr1:16922754-16961078	0	+	16922754	16961078	789624	24	44,155,62,166,107,237,97,84,234,200,183,145,147,231,194,128,170,180,135,144,239,160,168,321,	0,1570,7531,7674,8536,13882,14886,15645,16154,17139,21345,22707,23504,24006,25576,26044,28198,30547,31468,31979,32557,33242,35828,38003,
#Partially deleted in new
chr1	16922766	16954362	chr1:16922766-16954362	0	+	16922766	16954362	789624	17	32,186,84,62,166,107,237,97,84,234,200,183,145,147,231,180,140,	0,7079,7357,7519,7662,8524,13870,14874,15633,16142,17127,21333,22695,23492,23994,30535,31456,
#Partially deleted in new
chr1	16930134	16946405	chr1:16930134-16946405	0	+	16930134	16930134	8553170	10	73,62,166,107,97,234,200,183,145,106,	0,151,294,1156,7506,8774,9759,13965,15327,16165,
#Partially deleted in new
chr1	16936790	16940093	chr1:16936790-16940093	0	+	16936790	16940093	789624	4	83,97,234,200,	0,850,2118,3103,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	16938908	16954357	chr1:16938908-16954357	0	+	16938908	16938908	8553170	6	234,183,145,147,231,1056,	0,5191,6553,7350,7852,14393,
#Partially deleted in new
chr1	16946866	16953215	chr1:16946866-16953215	0	+	16946866	16946866	8553170	4	125,194,128,136,	0,1464,1932,6213,
#Partially deleted in new
chr1	16948390	16951338	chr1:16948390-16951338	0	+	16948390	16948390	8553170	3	134,128,386,	0,408,2562,
#Partially deleted in new
chr1	16953156	16954781	chr1:16953156-16954781	0	+	16953156	16953156	8553170	3	325,135,48,	0,1066,1577,
#Partially deleted in new
chr1	16966027	16970742	chr1:16966027-16970742	0	+	16966027	16966027	8553170	5	92,164,216,201,107,	0,380,2175,4225,4608,
#Deleted in new
chr1	16969784	16970967	chr1:16969784-16970967	0	+	16969784	16969784	8553170	3	150,201,332,	0,468,851,
#Deleted in new
chr1	16974501	16978276	chr1:16974501-16978276	1	-	16974919	16978273	789624	8	522,74,88,45,87,27,87,40,	0,767,1141,1999,2206,2395,2607,3735,
#Deleted in new
chr1	16974501	16980835	chr1:16974501-16980835	3	-	16974919	16978273	789624	9	522,74,88,45,87,27,90,78,249,	0,767,1141,1999,2206,2395,2607,3735,6085,
#Deleted in new
chr1	16974501	16980621	chr1:16974501-16980621	0	-	16974501	16974501	8553170	6	522,74,88,45,1607,35,	0,767,1141,1999,2206,6085,
#Deleted in new
chr1	16975661	16980632	chr1:16975661-16980632	0	-	16975661	16975661	8553170	6	69,45,216,90,78,46,	0,839,1046,1447,2575,4925,
#Deleted in new
chr1	16976170	16978314	chr1:16976170-16978314	0	-	16976170	16976170	8553170	5	375,87,27,90,78,	0,537,726,938,2066,
#Deleted in new
chr1	16976248	16978314	chr1:16976248-16978314	0	-	16976248	16976248	8553170	4	297,216,90,78,	0,459,860,1988,
#Partially deleted in new
chr1	16978925	17005091	chr1:16978925-17005091	3	+	16978925	16978925	8553170	2	187,449,	0,25717,
#Partially deleted in new
chr1	16985957	17011772	chr1:16985957-17011772	3	-	16986220	17011738	789624	29	401,170,152,224,97,153,80,117,161,125,121,160,96,207,189,47,111,156,132,67,135,70,78,80,130,59,183,95,44,	0,505,847,1088,2180,2364,3733,3929,4169,5776,6051,6285,6528,7671,10018,10296,10428,11062,14053,14288,14442,16076,16338,18374,18734,19056,19416,19726,25771,
#Partially deleted in new
chr1	16985957	17011915	chr1:16985957-17011915	1	-	16985984	17011738	789624	27	401,152,224,97,153,80,161,125,121,160,96,207,189,47,111,156,132,67,135,70,78,80,115,59,183,95,187,	0,847,1088,2180,2364,3733,4169,5776,6051,6285,6528,7671,10018,10296,10428,11062,14053,14288,14442,16076,16338,18374,18749,19056,19416,19726,25771,
#Partially deleted in new
chr1	16985957	17011928	chr1:16985957-17011928	1	-	16986220	17011738	789624	29	401,170,152,224,97,153,80,117,161,125,121,160,96,207,189,47,111,156,132,67,135,70,78,80,115,59,183,95,200,	0,505,847,1088,2180,2364,3733,3929,4169,5776,6051,6285,6528,7671,10018,10296,10428,11062,14053,14288,14442,16076,16338,18374,18749,19056,19416,19726,25771,
#Partially deleted in new
chr1	16985958	16991858	chr1:16985958-16991858	0	-	16985958	16985958	8553170	9	400,494,224,97,153,80,117,161,125,	0,504,1087,2179,2363,3732,3928,4168,5775,
#Partially deleted in new
chr1	16985980	16990003	chr1:16985980-16990003	0	-	16985984	16990003	789624	7	378,152,224,97,153,80,117,	0,824,1065,2157,2341,3710,3906,
#Partially deleted in new
chr1	16990174	16996283	chr1:16990174-16996283	0	-	16990174	16996283	789624	7	113,125,121,100,96,189,30,	0,1559,1834,2068,2311,5801,6079,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	16995486	17000847	chr1:16995486-17000847	0	-	16995486	16995486	8553170	7	678,47,111,156,132,67,448,	0,767,899,1533,4524,4759,4913,
#Partially deleted in new
chr1	16995858	17000291	chr1:16995858-17000291	0	-	16995858	16995858	8553170	5	306,47,156,132,46,	0,395,1161,4152,4387,
#Partially deleted in new
chr1	16995858	17011928	chr1:16995858-17011928	1	-	16995858	17000291	789624	14	306,47,156,132,67,135,70,78,80,115,59,183,95,200,	0,395,1161,4152,4387,4541,6175,6437,8473,8848,9155,9515,9825,15870,
#Deleted in new
chr1	16996033	16996694	chr1:16996033-16996694	0	-	16996033	16996033	8553170	2	131,441,	0,220,
#Partially deleted in new
chr1	16996086	17000312	chr1:16996086-17000312	0	-	16996086	17000312	789624	6	78,47,93,156,132,67,	0,167,299,933,3924,4159,
#Partially deleted in new
chr1	17000010	17005714	chr1:17000010-17005714	0	-	17000010	17005714	789624	10	132,67,135,70,78,77,130,59,183,31,	0,235,389,2023,2285,4321,4681,5003,5363,5673,
#Partially deleted in new
chr1	17000268	17005072	chr1:17000268-17005072	0	-	17000268	17005072	789624	7	44,108,70,78,80,130,59,	0,131,1765,2027,4063,4423,4745,
#Partially deleted in new
chr1	17000282	17005395	chr1:17000282-17005395	0	-	17000282	17005395	789624	8	30,108,70,78,80,115,59,22,	0,117,1751,2013,4049,4424,4731,5091,
#Partially deleted in new
chr1	17002319	17005765	chr1:17002319-17005765	0	-	17002319	17005765	789624	6	54,77,115,59,183,82,	0,2012,2387,2694,3054,3364,
#Partially deleted in new
chr1	17018721	17054170	chr1:17018721-17054170	3	-	17018880	17054019	789624	8	237,123,102,117,137,86,128,223,	0,3886,5251,9027,9878,14338,26039,35226,
#Partially deleted in new
chr1	17018751	17023160	chr1:17018751-17023160	0	-	17018751	17018751	8553170	3	207,123,67,	0,3856,4342,
#Partially deleted in new
chr1	17018751	17023036	chr1:17018751-17023036	0	-	17018751	17018751	8553170	2	207,429,	0,3856,
#Partially deleted in new
chr1	17022607	17054007	chr1:17022607-17054007	0	-	17022607	17022607	8553170	7	123,102,117,83,86,128,60,	0,1365,5141,6046,10452,22153,31340,
#Partially deleted in new
chr1	17023972	17045219	chr1:17023972-17045219	0	-	17023972	17045170	789624	6	102,117,137,86,128,79,	0,3776,4627,9087,20788,21168,
#Partially deleted in new
chr1	17027655	17044877	chr1:17027655-17044877	0	-	17027655	17027655	8553170	4	210,137,86,117,	0,944,5404,17105,
#Partially deleted in new
chr1	17027748	17052488	chr1:17027748-17052488	0	-	17027748	17044789	789624	5	117,137,86,128,234,	0,851,5311,17012,24506,
#Partially deleted in new
chr1	17032529	17054031	chr1:17032529-17054031	0	-	17032529	17032529	8553170	3	616,128,84,	0,12231,21418,
#Partially deleted in new
chr1	17066760	17119435	chr1:17066760-17119435	3	-	17069043	17119371	0	16	2517,129,86,94,145,152,108,112,104,179,126,118,62,73,184,156,	0,3327,4645,8095,8918,12503,15784,16965,17838,19760,25647,26806,29148,36226,38117,52519,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	17067599	17075351	chr1:17067599-17075351	0	-	17067599	17067599	8553170	4	1678,129,86,496,	0,2488,3806,7256,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	17067785	17083426	chr1:17067785-17083426	0	-	17067785	17067785	8553170	7	1492,129,86,968,152,594,191,	0,2302,3620,7070,11478,14759,15450,
#Partially deleted in new
chr1	17079030	17119435	chr1:17079030-17119435	1	-	17079259	17119371	0	11	385,108,112,104,179,126,118,62,73,184,156,	0,3514,4695,5568,7490,13377,14536,16878,23956,25847,40249,
#Partially deleted in new
chr1	17189782	17197617	chr1:17189782-17197617	3	+	17189782	17189782	8553170	3	148,201,4327,	0,3182,3508,
#Partially deleted in new
chr1	17189788	17196387	chr1:17189788-17196387	1	+	17189788	17189788	789624	4	142,201,159,88,	0,3176,5654,6511,
#Partially deleted in new
chr1	17193231	17201733	chr1:17193231-17201733	3	-	17193231	17193231	8553170	5	566,114,226,44,278,	0,1788,3297,4338,8224,
#Partially deleted in new
chr1	17205125	17246005	chr1:17205125-17246005	3	+	17205217	17244243	0	16	184,181,73,62,118,126,173,104,124,108,152,145,94,80,126,1996,	0,17164,18495,19241,20685,20907,23499,23822,24959,25446,27693,32188,33490,34578,35509,38884,
#Partially deleted in new
chr1	17223486	17226158	chr1:17223486-17226158	0	+	17223486	17223486	8553170	4	207,62,118,126,	0,880,2324,2546,
#Partially deleted in new
chr1	17239631	17246004	chr1:17239631-17246004	0	+	17239631	17239631	8553170	2	1129,1995,	0,4378,
#Partially deleted in new
chr1	17239631	17245968	chr1:17239631-17245968	0	+	17239631	17239631	8553170	3	152,126,1959,	0,1003,4378,
#Partially deleted in new
chr1	17249097	17284233	chr1:17249097-17284233	3	+	17249137	17283079	789624	16	132,181,73,62,118,126,179,104,112,108,152,145,103,80,126,1388,	0,10480,13035,16561,17621,18739,21135,21781,21969,24242,25537,27421,27676,31252,31573,33748,
#Partially deleted in new
chr1	17277888	17277975	chr1:17277888-17277975	3	+	17277888	17277888	5263520	1	87,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	17308194	17334796	chr1:17308194-17334796	1	+	17308222	17334367	789624	4	120,181,67,473,	0,22774,25748,26129,
#Partially deleted in new
chr1	17308196	17364004	chr1:17308196-17364004	3	+	17308222	17363755	0	16	118,181,67,68,118,126,179,104,112,108,155,145,103,71,129,483,	0,22772,25746,27962,29841,31491,33746,34102,37831,39744,46336,47786,48160,50641,51083,55325,
#Partially deleted in new
chr1	17346033	17348207	chr1:17346033-17348207	0	+	17346033	17346033	8553170	2	106,267,	0,1907,
#Partially deleted in new
chr1	17347926	17356447	chr1:17347926-17356447	0	+	17347926	17347926	8553170	4	122,155,145,91,	0,6606,8056,8430,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	17348729	17358849	chr1:17348729-17358849	0	+	17348729	17348729	8553170	5	56,155,145,103,12,	0,5803,7253,7627,10108,
#Partially deleted in new
chr1	17372195	17401699	chr1:17372195-17401699	3	+	17372245	17401438	0	16	166,178,73,68,118,126,179,104,112,108,155,157,124,71,162,495,	0,860,3231,7724,8851,9771,16185,16581,19918,21779,22104,22755,23344,24875,26490,29009,
#Partially deleted in new
chr1	17406759	17439724	chr1:17406759-17439724	3	-	17409089	17438514	0	13	2435,78,73,106,181,167,115,89,132,144,94,293,180,	0,3214,5362,6313,6777,9720,13954,15443,15945,18781,22346,31470,32785,
#Deleted in new
chr1	17406759	17407382	chr1:17406759-17407382	3	+	17406759	17406759	8553170	2	245,66,	0,557,
#Deleted in new
chr1	17407838	17409046	chr1:17407838-17409046	0	-	17407838	17407838	8553170	2	716,67,	0,1141,
#Partially deleted in new
chr1	17408675	17438561	chr1:17408675-17438561	1	-	17409089	17438514	0	12	519,78,73,106,181,167,115,89,132,144,94,332,	0,1298,3446,4397,4861,7804,12038,13527,14029,16865,20430,29554,
#Partially deleted in new
chr1	17539834	17697869	chr1:17539834-17697869	3	+	17580595	17697380	789624	29	116,80,186,34,92,84,176,117,109,107,78,180,117,93,174,146,15,182,116,128,101,122,87,224,155,149,175,123,1022,	0,40718,47625,48611,62292,63673,67967,73223,76259,79504,82029,83161,84552,86121,87495,92486,94713,95000,98053,98727,100367,108719,114801,116044,116719,124612,147738,155323,157013,
#Partially deleted in new
chr1	17580552	17697649	chr1:17580552-17697649	1	+	17580595	17697380	789624	27	80,186,34,92,84,176,109,107,78,180,117,93,174,146,15,182,116,128,101,122,87,224,155,149,175,123,802,	0,6907,7893,21574,22955,27249,35541,38786,41311,42443,43834,45403,46777,51768,53995,54282,57335,58009,59649,68001,74083,75326,76001,83894,107020,114605,116295,
#Deleted in new
chr1	17602170	17604882	chr1:17602170-17604882	0	+	17602170	17602170	8553170	3	48,84,407,	0,1337,2305,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	17615087	17697860	chr1:17615087-17697860	0	+	17615087	17615087	8553170	20	1115,107,78,180,117,93,174,146,182,116,128,101,122,87,224,155,149,175,123,1013,	0,4251,6776,7908,9299,10868,12242,17233,19747,22800,23474,25114,33466,39548,40791,41466,49359,72485,80070,81760,
#Partially deleted in new
chr1	17618315	17697868	chr1:17618315-17697868	1	+	17618353	17697380	789624	20	207,107,78,180,117,93,174,146,182,116,128,101,122,87,224,155,149,175,123,1021,	0,1023,3548,4680,6071,7640,9014,14005,16519,19572,20246,21886,30238,36320,37563,38238,46131,69257,76842,78532,
#Partially deleted in new
chr1	17626006	17697868	chr1:17626006-17697868	0	+	17626006	17691154	789624	16	42,174,146,182,116,128,101,122,87,224,155,149,175,73,123,1021,	0,1323,6314,8828,11881,12555,14195,22547,28629,29872,30547,38440,61566,65113,69151,70841,
#Partially deleted in new
chr1	17634256	17638003	chr1:17634256-17638003	0	+	17634256	17634256	8553170	3	306,182,116,	0,578,3631,
#Partially deleted in new
chr1	17639752	17654665	chr1:17639752-17654665	0	+	17639752	17639752	8553170	4	229,101,122,30,	0,449,8801,14883,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	17694046	17697874	chr1:17694046-17697874	0	+	17694046	17694046	8553170	2	1234,1027,	0,2801,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	17717686	17749978	chr1:17717686-17749978	3	+	17717686	17717686	8553170	4	58,161,89,302,	0,873,3993,31990,
#Partially deleted in new
chr1	17755312	17827063	chr1:17755312-17827063	3	+	17823008	17826519	789624	3	192,372,1297,	0,67672,70454,
#Partially deleted in new
chr1	17822981	17827061	chr1:17822981-17827061	1	+	17823008	17826519	789624	2	375,1295,	0,2785,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	18015711	18045612	chr1:18015711-18045612	3	+	18015711	18015711	8553170	4	660,112,513,728,	0,20077,22593,29173,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	18065656	18074412	chr1:18065656-18074412	3	+	18065656	18065656	789624	3	191,87,2193,	0,2535,6563,
#Partially deleted in new
chr1	18107745	18378482	chr1:18107745-18378482	3	+	18108128	18378326	789624	10	453,113,122,119,116,475,86,193,39,227,	0,120152,184120,227146,254369,257477,268564,269054,269647,270510,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	18109388	18115861	chr1:18109388-18115861	3	+	18109388	18109388	8553170	1	6473,	0,
#Partially deleted in new
chr1	18166928	18179346	chr1:18166928-18179346	3	-	18166928	18166928	8553170	4	96,17,22,295,	0,818,9224,12123,
#Partially deleted in new
chr1	18278844	18376367	chr1:18278844-18376367	0	+	18278844	18278844	8553170	6	40,122,119,116,475,58,	0,13021,56047,83270,86378,97465,
#Partially deleted in new
chr1	18361366	18378483	chr1:18361366-18378483	0	+	18361366	18361366	8553170	6	864,475,86,193,39,228,	0,3856,14943,15433,16026,16889,
#Deleted in new
chr1	18375956	18376920	chr1:18375956-18376920	0	+	18375956	18375956	8553170	2	439,121,	0,843,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	18385828	18388514	chr1:18385828-18388514	3	+	18385828	18385828	8553170	2	392,99,	0,2587,
#Deleted in new
chr1	18480981	18486126	chr1:18480981-18486126	3	+	18480981	18483315	789624	1	5145,	0,
#Deleted in new
chr1	18513117	18513383	chr1:18513117-18513383	7	+	18513117	18513117	16724991	1	266,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	18595413	18595636	chr1:18595413-18595636	7	+	18595413	18595413	16724991	1	223,	0,
#Partially deleted in new
chr1	18631005	18736138	chr1:18631005-18736138	1	+	18631603	18736039	789624	8	683,236,130,135,200,166,203,507,	0,3297,4105,5231,60748,69647,72088,104626,
#Partially deleted in new
chr1	18631520	18748866	chr1:18631520-18748866	3	+	18631603	18744929	789624	9	168,236,130,135,200,166,203,247,4053,	0,2782,3590,4716,60233,69132,71573,104111,113293,
#Partially deleted in new
chr1	18631523	18736102	chr1:18631523-18736102	1	+	18631603	18736039	789624	8	165,236,130,129,200,166,203,471,	0,2779,3587,4719,60230,69129,71570,104108,
#Partially deleted in new
chr1	18839598	18859682	chr1:18839598-18859682	3	-	18839598	18859660	789624	6	929,124,210,774,301,204,	0,2130,9742,14614,17732,19880,
#Partially deleted in new
chr1	18849272	18921121	chr1:18849272-18921121	3	-	18908560	18921121	789624	27	278,774,288,173,225,119,122,153,48,197,74,188,75,150,115,156,48,93,182,128,131,93,121,140,141,96,61,	0,4940,8058,9017,10202,25190,26109,27042,27935,28143,30027,32427,33851,34006,36011,36200,37191,40089,40739,59266,61069,62111,62690,67630,69089,70405,71788,
#Partially deleted in new
chr1	18871429	18902553	chr1:18871429-18902553	1	-	18872844	18902523	0	16	361,154,119,122,153,48,197,74,188,75,150,156,48,93,94,92,	0,1374,3033,3952,4885,5778,5986,7870,10270,11694,11849,14043,15034,17932,18582,31032,
#Partially deleted in new
chr1	18871431	18902781	chr1:18871431-18902781	3	-	18872844	18902523	0	15	1526,119,122,153,48,197,74,188,75,150,156,48,93,94,320,	0,3031,3950,4883,5776,5984,7868,10268,11692,11847,14041,15032,17930,18580,31030,
#Partially deleted in new
chr1	18871431	18902528	chr1:18871431-18902528	1	-	18872844	18902523	0	14	1526,119,122,48,197,74,188,75,150,156,48,93,94,67,	0,3031,3950,5776,5984,7868,10268,11692,11847,14041,15032,17930,18580,31030,
#Partially deleted in new
chr1	18872732	18890891	chr1:18872732-18890891	1	-	18872844	18889430	0	15	225,119,122,153,48,197,74,188,75,150,156,48,93,94,198,	0,1730,2649,3582,4475,4683,6567,8967,10391,10546,12740,13731,16629,17279,17961,
#Deleted in new
chr1	18882559	18885619	chr1:18882559-18885619	0	-	18882559	18882559	8553170	4	113,75,150,147,	0,564,719,2913,
#Partially deleted in new
chr1	18883110	18902724	chr1:18883110-18902724	0	-	18883110	18902523	789624	6	88,150,156,93,94,263,	0,168,2362,6251,6901,19351,
#Deleted in new
chr1	18883201	18883275	chr1:18883201-18883275	3	-	18883201	18883201	5263520	1	74,	0,
#Partially deleted in new
chr1	18904280	18956686	chr1:18904280-18956686	3	-	18908560	18956332	789624	9	4386,131,93,121,140,141,96,61,1019,	0,6061,7103,7682,12622,14081,15397,16780,51387,
#Partially deleted in new
chr1	18908290	18911992	chr1:18908290-18911992	0	-	18908560	18911992	789624	3	376,131,30,	0,2051,3672,
#Partially deleted in new
chr1	18908339	18955698	chr1:18908339-18955698	0	-	18908560	18955698	789624	8	327,131,93,121,140,96,61,31,	0,2002,3044,3623,8563,11338,12721,47328,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	19072109	19075511	chr1:19072109-19075511	3	-	19072109	19072109	8553170	1	3402,	0,
#Partially deleted in new
chr1	19074505	19210276	chr1:19074505-19210276	3	-	19074831	19210248	789624	106	391,163,91,225,195,126,143,114,219,100,174,191,120,108,128,88,81,198,122,174,82,142,110,158,130,128,85,91,344,129,126,139,240,194,88,86,145,169,246,79,228,150,210,117,108,97,175,138,105,178,131,112,122,141,175,135,64,217,217,164,202,172,158,228,153,159,183,171,231,148,71,192,64,189,199,101,102,210,158,98,122,230,126,183,129,80,136,283,170,86,160,188,118,138,100,191,60,125,125,142,103,140,130,104,98,204,	0,2234,3470,6843,9998,11639,12173,13310,14253,18313,18807,19443,20400,21039,22017,22687,25091,25870,27014,29578,30079,30542,31227,32063,32331,35590,35874,36236,38018,39193,39439,40305,40892,42715,43317,44366,45051,45674,46683,47428,48327,50035,51940,53117,53705,54472,63501,64577,66282,66841,67141,69474,70280,71287,72320,73487,74057,76071,77137,77807,78795,79262,80412,80935,81765,82261,83309,85605,86411,87083,87321,87914,89258,89747,90293,90743,91150,92516,93521,94929,96256,98358,98675,98933,99813,100448,102086,102955,104545,109305,109510,110593,112034,112658,112935,117682,117975,118927,122635,123164,123441,124035,124293,125145,127212,135567,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	19074509	19082240	chr1:19074509-19082240	1	-	19074831	19081806	789624	4	387,163,91,892,	0,2230,3466,6839,
#Partially deleted in new
chr1	19074513	19104916	chr1:19074513-19104916	1	-	19074831	19104105	789624	21	383,163,91,225,195,126,143,114,219,100,174,191,120,108,128,88,81,198,122,174,332,	0,2226,3462,6835,9990,11631,12165,13302,14245,18305,18799,19435,20392,21031,22009,22679,25083,25862,27006,29570,30071,
#Partially deleted in new
chr1	19074517	19081306	chr1:19074517-19081306	0	-	19074517	19074517	8553170	3	379,163,3331,	0,2222,3458,
#Partially deleted in new
chr1	19074566	19077827	chr1:19074566-19077827	0	-	19074566	19074566	8553170	3	330,163,43,	0,2173,3218,
#Deleted in new
chr1	19092732	19093440	chr1:19092732-19093440	0	-	19092732	19092732	8553170	2	186,128,	0,580,
#Partially deleted in new
chr1	19093360	19100126	chr1:19093360-19100126	0	-	19093360	19093360	8553170	8	126,191,120,108,128,88,81,49,	0,588,1545,2184,3162,3832,6236,6717,
#Deleted in new
chr1	19094094	19095922	chr1:19094094-19095922	0	-	19094094	19094094	8553170	3	45,120,378,	0,811,1450,
#Partially deleted in new
chr1	19106565	19110558	chr1:19106565-19110558	0	-	19106565	19106565	8553170	4	161,130,128,179,	0,271,3530,3814,
#Partially deleted in new
chr1	19110486	19112687	chr1:19110486-19112687	0	-	19110486	19110486	8553170	2	346,164,	0,2037,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	19111639	19118849	chr1:19111639-19118849	1	-	19113878	19117288	789624	5	2431,139,240,194,1027,	0,3171,3758,5581,6183,
#Partially deleted in new
chr1	19121199	19151700	chr1:19121199-19151700	0	-	19121199	19151700	789624	21	235,79,228,150,210,117,108,97,175,138,178,131,112,122,141,84,175,135,64,217,58,	0,734,1633,3341,5246,6423,7011,7778,16807,17883,20147,20447,22780,23586,24593,24823,25626,26793,27363,29377,30443,
#Partially deleted in new
chr1	19121212	19168055	chr1:19121212-19168055	0	-	19121212	19168055	789624	41	222,79,228,150,210,117,108,97,175,138,178,131,112,122,141,175,135,64,33,217,217,164,202,172,158,228,153,159,183,171,231,148,71,192,64,189,199,101,102,210,29,	0,721,1620,3328,5233,6410,6998,7765,16794,17870,20134,20434,22767,23573,24580,25613,26780,27350,28550,29364,30430,31100,32088,32555,33705,34228,35058,35554,36602,38898,39704,40376,40614,41207,42551,43040,43586,44036,44443,45809,46814,
#Deleted in new
chr1	19124476	19127701	chr1:19124476-19127701	0	-	19124476	19124476	8553170	4	214,97,210,79,	0,1126,1969,3146,
#Partially deleted in new
chr1	19144851	19146128	chr1:19144851-19146128	0	-	19144851	19144851	8553170	2	56,336,	0,941,
#Partially deleted in new
chr1	19150923	19177745	chr1:19150923-19177745	0	-	19150923	19150923	8553170	30	936,164,202,172,161,228,153,159,183,171,231,148,71,192,64,189,199,101,102,210,158,98,122,230,126,183,129,80,136,285,	0,1389,2377,2844,3994,4517,5347,5843,6891,9187,9993,10665,10903,11496,12840,13329,13875,14325,14732,16098,17103,18511,19838,21940,22257,22515,23395,24030,25668,26537,
#Partially deleted in new
chr1	19153838	19155039	chr1:19153838-19155039	0	-	19153838	19153838	8553170	2	61,122,	0,1079,
#Partially deleted in new
chr1	19210500	19240704	chr1:19210500-19240704	3	+	19210500	19210500	789624	2	59,448,	0,29756,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr1	19215663	19251552	chr1:19215663-19251552	3	-	19219302	19251509	789624	23	3819,130,85,211,174,138,120,162,150,200,123,97,123,63,72,168,150,127,129,94,66,125,138,	0,3905,5100,6960,7732,11649,15180,15597,16960,17272,19466,21478,22353,23131,23567,24154,24633,25352,26681,27950,28286,29242,35751,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr1	19216873	19251509	chr1:19216873-19251509	1	-	19219302	19251509	789624	23	2609,130,85,211,174,138,120,162,150,200,123,97,123,60,72,168,150,127,129,94,66,125,95,	0,2695,3890,5750,6522,10439,13970,14387,15750,16062,18256,20268,21143,21921,22357,22944,23423,24142,25471,26740,27076,28032,34541,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	19216873	19221916	chr1:19216873-19221916	0	-	19216873	19216873	8553170	3	2609,130,1153,	0,2695,3890,
#Partially deleted in new
chr1	19218147	19251522	chr1:19218147-19251522	1	-	19219302	19251509	789624	22	1335,130,85,211,174,138,120,162,150,200,123,97,123,63,72,168,150,127,129,94,125,108,	0,1421,2616,4476,5248,9165,12696,13113,14476,14788,16982,18994,19869,20647,21083,21670,22149,22868,24197,25466,26758,33267,
#Deleted in new
chr1	19218944	19221205	chr1:19218944-19221205	0	-	19218944	19218944	8553170	2	538,1637,	0,624,
#Partially deleted in new
chr1	19219369	19223506	chr1:19219369-19223506	0	-	19219415	19223506	789624	5	113,101,47,211,111,	0,199,1394,3254,4026,
#Partially deleted in new
chr1	19219381	19222761	chr1:19219381-19222761	0	-	19219632	19222761	789624	4	101,101,85,138,	0,187,1382,3242,
#Partially deleted in new
chr1	19219568	19229395	chr1:19219568-19229395	0	-	19219568	19219568	8553170	6	130,85,211,174,138,41,	0,1195,3055,3827,7744,9786,
#Partially deleted in new
chr1	19219614	19223007	chr1:19219614-19223007	0	-	19219614	19219614	8553170	3	55,85,384,	0,1149,3009,
#Partially deleted in new
chr1	19232927	19238804	chr1:19232927-19238804	0	-	19232927	19238804	789624	6	208,9,123,97,123,10,	0,1252,2202,4214,5089,5867,
#Deleted in new
chr1	19239668	19240568	chr1:19239668-19240568	0	-	19239668	19239668	8553170	2	317,272,	0,628,
#Partially deleted in new
chr1	19243619	19251525	chr1:19243619-19251525	0	-	19244897	19251509	789624	4	88,66,292,111,	0,330,1119,7795,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	19244581	19251527	chr1:19244581-19251527	0	-	19244581	19244581	8553170	2	449,113,	0,6833,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	19251538	19260128	chr1:19251538-19260128	3	+	19251835	19258830	789624	8	325,59,104,82,68,152,77,1448,	0,3243,4409,5525,5915,6294,6938,7142,
#Partially deleted in new
chr1	19251834	19256052	chr1:19251834-19256052	0	+	19251834	19251834	8553170	3	414,59,105,	0,2947,4113,
#Deleted in new
chr1	19257711	19258739	chr1:19257711-19258739	0	+	19257711	19257711	8553170	3	273,77,59,	0,765,969,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	19265981	19273941	chr1:19265981-19273941	0	-	19267348	19273941	789624	5	1480,130,105,188,81,	0,2590,4469,4766,7879,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	19267102	19274194	chr1:19267102-19274194	1	-	19267299	19274074	8553170	7	359,130,100,97,105,188,334,	0,1469,2169,2480,3348,3645,6758,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	19267129	19274151	chr1:19267129-19274151	3	-	19267299	19274074	789624	8	332,130,100,97,105,84,101,291,	0,1442,2142,2453,3321,3618,3705,6731,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	19270532	19271269	chr1:19270532-19271269	0	-	19270532	19270532	8553170	2	23,522,	0,215,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	19282557	19289250	chr1:19282557-19289250	3	-	19282730	19288709	0	7	335,130,100,97,105,188,755,	0,1438,2128,2460,3330,3627,5938,
#Partially deleted in new
chr1	19297079	19297903	chr1:19297079-19297903	7	+	19297079	19297079	16724991	2	110,415,	0,409,
#Partially deleted in new
chr1	19303964	19312146	chr1:19303964-19312146	3	-	19304224	19312124	0	7	422,130,100,97,105,188,320,	0,2053,3037,3349,4193,4490,7862,
#Partially deleted in new
chr1	19303998	19312094	chr1:19303998-19312094	0	-	19304224	19312094	789624	6	388,130,100,97,188,268,	0,2019,3003,3315,4456,7828,
#Partially deleted in new
chr1	19304165	19311907	chr1:19304165-19311907	0	-	19304273	19311907	789624	5	221,130,105,188,81,	0,1852,3992,4289,7661,
#Partially deleted in new
chr1	19304284	19308505	chr1:19304284-19308505	0	-	19307089	19308505	789624	5	102,130,100,105,51,	0,1733,2717,3873,4170,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	19305075	19305182	chr1:19305075-19305182	3	-	19305075	19305075	8553170	1	107,	0,
#Partially deleted in new
chr1	19307738	19312103	chr1:19307738-19312103	0	-	19307738	19307738	8553170	3	524,188,277,	0,716,4088,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	19312325	19329300	chr1:19312325-19329300	3	+	19317677	19328643	789624	9	33,161,242,130,88,143,93,186,729,	0,403,5274,12307,13169,13919,14205,14901,16246,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	19312327	19329280	chr1:19312327-19329280	1	+	19317677	19328643	789624	8	562,242,130,88,143,93,186,709,	0,5272,12305,13167,13917,14203,14899,16244,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	19312329	19329284	chr1:19312329-19329284	0	+	19324663	19325534	789624	8	29,161,130,57,143,93,186,713,	0,399,12303,13196,13915,14201,14897,16242,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	19312340	19329300	chr1:19312340-19329300	1	+	19324663	19328643	789624	8	18,161,130,88,143,93,186,729,	0,388,12292,13154,13904,14190,14886,16231,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	19312728	19328987	chr1:19312728-19328987	0	+	19317677	19325534	789624	8	161,242,130,57,143,93,186,416,	0,4871,11904,12797,13516,13802,14498,15843,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	19324753	19328081	chr1:19324753-19328081	0	+	19324753	19327621	789624	5	9,88,143,93,511,	0,741,1491,1777,2817,
#Partially deleted in new
chr1	19338775	19485513	chr1:19338775-19485513	1	-	19339566	19448914	789624	9	842,66,117,142,114,122,90,497,78,	0,6411,17859,18646,39764,46729,80885,110058,146660,
#Partially deleted in new
chr1	19338778	19419751	chr1:19338778-19419751	1	-	19339529	19419717	789624	8	839,77,66,117,142,114,122,91,	0,5579,6408,17856,18643,39761,46726,80882,
#Partially deleted in new
chr1	19338822	19485485	chr1:19338822-19485485	1	-	19342761	19485438	789624	10	795,113,77,66,117,142,114,122,90,50,	0,3929,5535,6364,17812,18599,39717,46682,80838,146613,
#Partially deleted in new
chr1	19339358	19484664	chr1:19339358-19484664	1	-	19339529	19484279	789624	9	259,77,66,117,142,114,122,90,475,	0,4999,5828,17276,18063,39181,46146,80302,144831,
#Partially deleted in new
chr1	19339529	19485477	chr1:19339529-19485477	3	-	19339529	19485438	789624	9	88,77,66,117,142,114,122,90,42,	0,4828,5657,17105,17892,39010,45975,80131,145906,
#Partially deleted in new
chr1	19356654	19485539	chr1:19356654-19485539	0	-	19356654	19356654	8553170	5	97,142,114,122,104,	0,767,21885,28850,128781,
#Partially deleted in new
chr1	19357444	19385797	chr1:19357444-19385797	0	-	19357444	19357444	8553170	4	119,114,122,77,	0,21095,28060,28276,
#Partially deleted in new
chr1	19357521	19420144	chr1:19357521-19420144	0	-	19357521	19357521	8553170	5	42,114,122,90,120,	0,21018,27983,62139,62503,
#Partially deleted in new
chr1	19374174	19485488	chr1:19374174-19485488	0	-	19374174	19374174	8553170	5	281,114,122,90,53,	0,4365,11330,45486,111261,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	19424383	19424671	chr1:19424383-19424671	3	+	19424383	19424383	8553170	1	288,	0,
#Partially deleted in new
chr1	19484402	19626630	chr1:19484402-19626630	1	+	19623478	19626401	8553170	4	253,48,110,244,	0,137697,139071,141984,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	19510592	19510733	chr1:19510592-19510733	3	+	19510592	19510592	8553170	1	141,	0,
#Partially deleted in new
chr1	19591801	19596832	chr1:19591801-19596832	3	-	19591801	19591801	789624	2	84,123,	0,4908,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	19596976	19629821	chr1:19596976-19629821	1	+	19597045	19626401	789624	3	133,110,3435,	0,26497,29410,
#Partially deleted in new
chr1	19596978	19658056	chr1:19596978-19658056	3	+	19655030	19657129	0	4	131,189,112,1191,	0,58033,58345,59887,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	19596982	19623790	chr1:19596982-19623790	0	+	19596982	19596982	8553170	4	127,185,48,317,	0,3804,25117,26491,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	19596989	19629820	chr1:19596989-19629820	3	+	19597045	19626401	789624	4	120,48,110,3434,	0,25110,26484,29397,
#Deleted in new
chr1	19596990	19598195	chr1:19596990-19598195	0	+	19596990	19596990	8553170	2	119,362,	0,843,
#Partially deleted in new
chr1	19597000	19626623	chr1:19597000-19626623	0	+	19597000	19597000	789624	5	109,79,48,110,237,	0,20257,25099,26473,29386,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	19597038	19626629	chr1:19597038-19626629	0	+	19597038	19597038	8553170	5	71,185,48,110,243,	0,3748,25061,26435,29348,
#Partially deleted in new
chr1	19597040	19626587	chr1:19597040-19626587	0	+	19597040	19597040	8553170	5	69,48,110,241,201,	0,25059,26433,28351,29346,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	19597051	19601304	chr1:19597051-19601304	0	+	19597051	19597051	8553170	2	58,518,	0,3735,
#Partially deleted in new
chr1	19597066	19656926	chr1:19597066-19656926	0	+	19617296	19626401	789624	9	43,79,48,110,90,88,189,112,61,	0,20191,25033,26407,29320,37370,57945,58257,59799,
#Partially deleted in new
chr1	19597066	19656914	chr1:19597066-19656914	3	+	19597066	19626401	789624	10	43,48,110,90,88,124,146,189,112,49,	0,25033,26407,29320,37370,43279,43517,57945,58257,59799,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	19597067	19656927	chr1:19597067-19656927	0	+	19597067	19600884	789624	5	42,185,189,112,62,	0,3719,57944,58256,59798,
#Partially deleted in new
chr1	19597069	19626606	chr1:19597069-19626606	0	+	19597069	19597069	8553170	5	40,20,48,110,220,	0,764,25030,26404,29317,
#Partially deleted in new
chr1	19608113	19608568	chr1:19608113-19608568	7	+	19608113	19608113	16724991	1	455,	0,
#Partially deleted in new
chr1	19640553	19656934	chr1:19640553-19656934	0	+	19655030	19656934	789624	4	176,189,112,69,	0,14458,14770,16312,
#Partially deleted in new
chr1	19643231	19657129	chr1:19643231-19657129	1	+	19643311	19657129	0	4	166,189,112,264,	0,11780,12092,13634,
#Partially deleted in new
chr1	19643408	19656969	chr1:19643408-19656969	0	+	19655030	19656969	789624	4	217,189,112,104,	0,11603,11915,13457,
#Partially deleted in new
chr1	19643408	19658456	chr1:19643408-19658456	1	+	19655030	19657129	0	4	217,189,112,1591,	0,11603,11915,13457,
#Partially deleted in new
chr1	19643713	19656911	chr1:19643713-19656911	0	+	19655030	19656911	789624	4	241,189,112,46,	0,11298,11610,13152,
#Partially deleted in new
chr1	19643713	19658456	chr1:19643713-19658456	1	+	19655030	19657129	0	4	241,189,112,1591,	0,11298,11610,13152,
#Partially deleted in new
chr1	19644162	19658452	chr1:19644162-19658452	1	+	19655030	19657129	0	4	284,189,112,1587,	0,10849,11161,12703,
#Partially deleted in new
chr1	19645371	19656933	chr1:19645371-19656933	0	+	19655030	19656933	789624	4	159,189,112,68,	0,9640,9952,11494,
#Partially deleted in new
chr1	19645371	19658456	chr1:19645371-19658456	1	+	19655030	19657129	0	4	159,189,112,1591,	0,9640,9952,11494,
#Partially deleted in new
chr1	19645765	19655436	chr1:19645765-19655436	0	+	19645950	19655436	789624	3	268,189,113,	0,9246,9558,
#Partially deleted in new
chr1	19645765	19658456	chr1:19645765-19658456	1	+	19645950	19657129	789624	4	268,189,112,1591,	0,9246,9558,11100,
#Partially deleted in new
chr1	19647609	19657076	chr1:19647609-19657076	0	+	19655033	19657076	789624	4	61,189,112,211,	0,7402,7714,9256,
#Partially deleted in new
chr1	19647609	19658456	chr1:19647609-19658456	1	+	19655030	19657129	0	4	61,189,112,1591,	0,7402,7714,9256,
#Partially deleted in new
chr1	19665286	19679562	chr1:19665286-19679562	3	+	19665753	19679368	789624	3	1181,159,644,	0,13280,13632,
#Partially deleted in new
chr1	19682212	19799917	chr1:19682212-19799917	3	-	19683039	19780758	789624	16	1232,118,118,85,137,165,120,144,98,133,28,175,187,92,79,63,	0,12221,18555,55159,57611,58564,63319,64243,64950,73421,88329,89095,98367,104813,115924,117642,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	19682239	19799344	chr1:19682239-19799344	1	-	19682628	19780758	789624	16	475,157,118,118,85,137,165,120,144,98,133,28,175,187,92,171,	0,1048,12194,18528,55132,57584,58537,63292,64216,64923,73394,88302,89068,98340,104786,116934,
#Partially deleted in new
chr1	19682241	19738419	chr1:19682241-19738419	0	-	19682241	19682241	8553170	5	1203,118,118,85,198,	0,12192,18526,55130,55980,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	19694491	19701210	chr1:19694491-19701210	0	-	19694491	19694491	8553170	2	60,443,	0,6276,
#Partially deleted in new
chr1	19737371	19780764	chr1:19737371-19780764	0	-	19737371	19737371	8553170	9	85,137,165,144,98,133,28,175,185,	0,2452,3405,9084,9791,18262,33170,33936,43208,
#Partially deleted in new
chr1	19747162	19799945	chr1:19747162-19799945	0	-	19747162	19747162	8553170	7	98,133,28,175,187,92,91,	0,8471,23379,24145,33417,39863,52692,
#Partially deleted in new
chr1	19750080	19771427	chr1:19750080-19771427	0	-	19750080	19750080	8553170	4	292,133,28,120,	0,5553,20461,21227,
#Partially deleted in new
chr1	19771345	19799940	chr1:19771345-19799940	0	-	19771345	19771345	8553170	5	137,187,92,145,86,	0,9234,15680,26725,28509,
#Deleted in new
chr1	19814028	19815278	chr1:19814028-19815278	3	-	19814417	19815101	789624	1	1250,	0,
#Partially deleted in new
chr1	19814366	19819502	chr1:19814366-19819502	3	+	19814366	19814366	8553170	2	187,260,	0,4876,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	19882512	19912945	chr1:19882512-19912945	3	+	19882513	19907746	0	8	222,149,113,123,132,97,185,5376,	0,7872,11855,15027,21754,22378,23919,25057,
#Partially deleted in new
chr1	19890457	19897815	chr1:19890457-19897815	0	+	19890457	19890457	8553170	3	76,113,276,	0,3910,7082,
#Deleted in new
chr1	19906564	19906944	chr1:19906564-19906944	0	+	19906564	19906564	8553170	2	52,217,	0,163,
#Deleted in new
chr1	19920008	19923617	chr1:19920008-19923617	3	-	19920306	19923559	0	4	441,107,139,98,	0,2289,2608,3511,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	19970968	19971269	chr1:19970968-19971269	3	+	19970968	19970968	8553170	1	301,	0,
#Partially deleted in new
chr1	19975430	19979607	chr1:19975430-19979607	0	-	19975430	19975430	8553170	5	413,107,145,178,28,	0,2584,2949,3303,4149,
#Partially deleted in new
chr1	19975430	19979621	chr1:19975430-19979621	1	-	19975700	19978483	8553170	5	413,107,105,146,42,	0,2584,2949,3303,4149,
#Partially deleted in new
chr1	19975431	19979743	chr1:19975431-19979743	1	-	19975700	19978773	0	5	412,107,145,146,164,	0,2583,2948,3302,4148,
#Partially deleted in new
chr1	19975437	19980416	chr1:19975437-19980416	3	-	19975700	19978773	0	6	406,107,145,146,111,55,	0,2577,2942,3296,4142,4924,
#Partially deleted in new
chr1	19975437	19979614	chr1:19975437-19979614	0	-	19975437	19975437	8553170	3	406,865,35,	0,2577,4142,
#Partially deleted in new
chr1	19975464	19980407	chr1:19975464-19980407	0	-	19975464	19975464	8553170	6	379,107,145,146,80,46,	0,2550,2915,3269,4115,4897,
#Partially deleted in new
chr1	19975672	19980416	chr1:19975672-19980416	0	-	19975672	19975672	8553170	6	171,107,145,146,111,55,	0,2342,2707,3061,3907,4689,
#Deleted in new
chr1	19978245	19979067	chr1:19978245-19979067	0	-	19978245	19978245	8553170	2	239,334,	0,488,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	20028178	20091190	chr1:20028178-20091190	0	+	20028178	20028178	8553170	10	531,40,48,61,106,160,50,145,107,623,	0,17923,26613,31453,37845,40694,56642,57904,61610,62389,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	20028429	20091158	chr1:20028429-20091158	0	+	20028429	20028429	8553170	8	280,61,160,50,145,119,107,591,	0,31202,40443,56391,57653,60395,61359,62138,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	20028433	20086227	chr1:20028433-20086227	0	+	20028433	20028433	8553170	7	276,61,160,172,100,50,145,	0,31198,40439,41860,42411,56387,57649,
#Partially deleted in new
chr1	20070207	20091168	chr1:20070207-20091168	3	+	20084830	20090692	0	5	258,50,145,107,601,	0,14613,15875,19581,20360,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	20070294	20090828	chr1:20070294-20090828	0	+	20070294	20070294	8553170	7	171,138,50,145,77,107,261,	0,6466,14526,15788,18530,19494,20273,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	20111938	20119557	chr1:20111938-20119557	3	-	20114113	20119498	789624	4	2321,107,145,99,	0,3568,4394,7520,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	20112656	20119566	chr1:20112656-20119566	1	-	20114255	20119498	789624	3	1603,145,108,	0,3676,6802,
#Partially deleted in new
chr1	20139325	20150386	chr1:20139325-20150386	3	+	20139427	20148401	789624	5	218,53,145,110,2197,	0,840,4120,5254,8864,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	20139329	20144080	chr1:20139329-20144080	0	+	20139329	20139329	8553170	2	214,3915,	0,836,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	20161252	20177424	chr1:20161252-20177424	1	-	20163990	20177363	789624	4	2905,104,139,101,	0,11541,13754,16071,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	20163091	20175169	chr1:20163091-20175169	0	-	20163091	20163091	8553170	2	205,163,	0,11915,
#Partially deleted in new
chr1	20163990	20175194	chr1:20163990-20175194	3	-	20163990	20175194	789624	3	167,98,188,	0,8803,11016,
#Partially deleted in new
chr1	20184241	20186486	chr1:20184241-20186486	3	-	20184241	20184241	789624	2	383,127,	0,2118,
#Partially deleted in new
chr1	20186084	20196048	chr1:20186084-20196048	3	+	20190561	20191404	789624	2	69,5502,	0,4462,
#Partially deleted in new
chr1	20243094	20244655	chr1:20243094-20244655	3	+	20243094	20243094	789624	2	120,360,	0,1201,
#Partially deleted in new
chr1	20272017	20273599	chr1:20272017-20273599	0	+	20272017	20272017	8553170	2	91,740,	0,842,
#Partially deleted in new
chr1	20272478	20275005	chr1:20272478-20275005	3	+	20272478	20272478	8553170	3	1225,113,210,	0,1810,2317,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr1	20290918	20354894	chr1:20290918-20354894	1	+	20310601	20354263	789624	22	170,165,153,271,146,132,125,177,111,203,115,186,184,191,178,315,138,114,75,70,118,1138,	0,19657,21917,23403,26611,27671,28463,32437,36971,39261,39950,41847,45384,46727,51513,52160,54537,57326,59237,59938,61136,62838,
#Partially deleted in new
chr1	20290918	20354263	chr1:20290918-20354263	3	+	20310601	20354263	789624	22	170,165,153,271,146,132,125,177,111,203,115,186,184,191,178,315,138,129,75,70,118,507,	0,19657,21917,23403,26611,27671,28463,32437,36971,39261,39950,41847,45384,46727,51513,52160,54537,57329,59237,59938,61136,62838,
#Partially deleted in new
chr1	20290918	20354251	chr1:20290918-20354251	0	+	20310601	20317577	789624	22	170,165,153,215,146,132,125,177,111,203,115,186,184,191,178,315,138,114,75,70,118,495,	0,19657,21917,23459,26611,27671,28463,32437,36971,39261,39950,41847,45384,46727,51513,52160,54537,57326,59237,59938,61136,62838,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	20290936	20339222	chr1:20290936-20339222	0	+	20310601	20318611	789624	15	152,165,153,271,146,298,125,177,111,203,115,186,184,191,1248,	0,19639,21899,23385,26593,27487,28445,32419,36953,39243,39932,41829,45366,46709,47038,
#Partially deleted in new
chr1	20294210	20323187	chr1:20294210-20323187	3	-	20294210	20294210	8553170	2	144,85,	0,28892,
#Partially deleted in new
chr1	20303080	20312942	chr1:20303080-20312942	0	+	20310601	20312942	789624	3	269,165,107,	0,7495,9755,
#Partially deleted in new
chr1	20303080	20314412	chr1:20303080-20314412	0	+	20310601	20314412	789624	4	132,165,153,91,	0,7495,9755,11241,
#Partially deleted in new
chr1	20332914	20354251	chr1:20332914-20354251	0	+	20332914	20349273	789624	12	37,184,191,178,315,138,114,201,75,70,118,495,	0,3388,4731,9517,10164,12541,15330,16183,17241,17942,19140,20842,
#Partially deleted in new
chr1	20332917	20354222	chr1:20332917-20354222	0	+	20332917	20332917	8553170	10	34,184,191,178,315,138,114,70,118,466,	0,3385,4728,9514,10161,12538,15327,17939,19137,20839,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	20360578	20428782	chr1:20360578-20428782	3	-	20360578	20360578	789624	12	1463,251,144,129,122,54,305,70,53,120,83,199,	0,1565,13016,16802,17732,18394,37904,38901,40356,44996,45608,68005,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	20398087	20428788	chr1:20398087-20428788	0	-	20398087	20398087	8553170	7	138,305,70,120,83,105,205,	0,395,1392,7487,8099,10618,30496,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	20398089	20428809	chr1:20398089-20428809	1	-	20398089	20398089	8553170	8	136,247,70,53,73,120,83,226,	0,393,1390,2845,4684,7485,8097,30494,
#Partially deleted in new
chr1	20398104	20428739	chr1:20398104-20428739	0	-	20398104	20398104	8553170	5	121,305,120,83,156,	0,378,7470,8082,30479,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	20398715	20431234	chr1:20398715-20431234	0	-	20398715	20398715	8553170	5	23,70,120,83,58,	0,764,6859,7471,32461,
#Deleted in new
chr1	20412303	20413253	chr1:20412303-20413253	3	-	20412303	20412303	8553170	3	179,87,110,	0,264,840,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	20476221	20478793	chr1:20476221-20478793	0	+	20476221	20476221	8553170	2	184,802,	0,1770,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	20476629	20478937	chr1:20476629-20478937	3	+	20476629	20476629	8553170	2	210,946,	0,1362,
#Deleted in new
chr1	20478778	20480397	chr1:20478778-20480397	3	-	20478778	20478778	8553170	2	573,101,	0,1518,
#Deleted in new
chr1	20482390	20486220	chr1:20482390-20486220	3	-	20483648	20485379	789624	2	1329,1007,	0,2823,
#Deleted in new
chr1	20483186	20484645	chr1:20483186-20484645	0	-	20483186	20483186	8553170	2	533,279,	0,1180,
#Partially deleted in new
chr1	20499447	20508161	chr1:20499447-20508161	3	-	20500689	20508024	789624	4	1972,121,88,257,	0,2621,3774,8457,
#Deleted in new
chr1	20525988	20526751	chr1:20525988-20526751	7	+	20525988	20525988	16724991	1	763,	0,
#Deleted in new
chr1	20552438	20555010	chr1:20552438-20555010	3	+	20552973	20553963	789624	1	2572,	0,
#Partially deleted in new
chr1	20588947	20618908	chr1:20588947-20618908	3	+	20589129	20618568	0	4	336,112,58,457,	0,15980,24894,29504,
#Partially deleted in new
chr1	20589085	20618903	chr1:20589085-20618903	0	+	20589085	20589085	8553170	3	198,112,452,	0,15842,29366,
#Partially deleted in new
chr1	20633454	20651511	chr1:20633454-20651511	3	+	20633548	20650691	789624	8	481,288,101,183,164,128,237,1078,	0,4387,6437,11035,12105,15050,15540,16979,
#Deleted in new
chr1	20633678	20633788	chr1:20633678-20633788	3	+	20633678	20633678	5263520	1	110,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	20638128	20651316	chr1:20638128-20651316	0	+	20638128	20638128	8553170	5	1864,183,164,727,883,	0,6361,7431,10376,12305,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	20642656	20652193	chr1:20642656-20652193	3	-	20642656	20642656	789624	3	462,102,3879,	0,2928,5658,
#Partially deleted in new
chr1	20645507	20651510	chr1:20645507-20651510	0	+	20645507	20645507	8553170	4	216,128,237,1077,	0,2997,3487,4926,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	20651766	20661544	chr1:20651766-20661544	3	-	20652378	20661401	789624	11	762,107,121,148,149,94,95,104,87,111,348,	0,854,1084,1860,2456,2847,3673,3909,4334,9114,9430,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	20651776	20661507	chr1:20651776-20661507	1	-	20652378	20661401	789624	11	752,107,121,148,149,94,95,104,87,111,311,	0,844,1074,1850,2446,2837,3663,3899,4324,9104,9420,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	20651776	20661391	chr1:20651776-20661391	1	-	20652378	20661350	789624	11	752,107,121,148,149,94,95,104,87,111,195,	0,844,1074,1850,2446,2837,3663,3899,4324,9104,9420,
#Deleted in new
chr1	20652633	20653084	chr1:20652633-20653084	0	-	20652633	20652633	8553170	2	94,234,	0,217,
#Partially deleted in new
chr1	20655439	20661388	chr1:20655439-20661388	0	-	20655439	20661350	789624	4	95,104,111,192,	0,236,5441,5757,
#Deleted in new
chr1	20660398	20661369	chr1:20660398-20661369	0	-	20660398	20660398	8553170	2	593,173,	0,798,
#Partially deleted in new
chr1	20664013	20717491	chr1:20664013-20717491	1	-	20664583	20715570	789624	15	749,118,71,259,232,212,81,557,148,110,453,190,102,147,143,	0,2200,6407,7924,18639,20795,22032,23374,26174,34365,40433,45625,49440,51479,53335,
#Partially deleted in new
chr1	20664013	20717780	chr1:20664013-20717780	1	-	20664583	20717706	789624	15	749,118,68,259,232,212,81,557,148,110,453,190,102,147,305,	0,2200,6407,7924,18639,20795,22032,23374,26174,34365,40433,45625,49440,51479,53462,
#Partially deleted in new
chr1	20664013	20685187	chr1:20664013-20685187	0	-	20664013	20664013	8553170	6	749,118,68,259,232,379,	0,2200,6407,7924,18639,20795,
#Partially deleted in new
chr1	20664013	20698439	chr1:20664013-20698439	0	-	20664013	20664013	8553170	9	749,118,71,259,232,212,81,148,61,	0,2200,6407,7924,18639,20795,22032,26174,34365,
#Partially deleted in new
chr1	20664013	20664590	chr1:20664013-20664590	0	-	20664013	20664013	8553170	2	191,203,	0,374,
#Partially deleted in new
chr1	20664015	20718017	chr1:20664015-20718017	3	-	20664583	20717706	789624	15	747,118,71,259,232,212,81,557,148,110,453,190,102,147,542,	0,2198,6405,7922,18637,20793,22030,23372,26172,34363,40431,45623,49438,51477,53460,
#Partially deleted in new
chr1	20666213	20685283	chr1:20666213-20685283	0	-	20666213	20666213	8553170	6	118,71,259,232,212,32,	0,4207,5724,16439,18595,19038,
#Partially deleted in new
chr1	20670428	20686375	chr1:20670428-20686375	0	-	20670428	20670428	8553170	6	60,259,232,212,81,32,	0,1509,12224,14380,15617,15915,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	20672015	20673020	chr1:20672015-20673020	0	-	20672015	20672015	8553170	2	181,141,	0,864,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	20692733	20694013	chr1:20692733-20694013	7	-	20692733	20692733	16724991	4	42,144,149,144,	0,355,849,1136,
#Partially deleted in new
chr1	20719731	20732640	chr1:20719731-20732640	1	-	20721791	20726057	789624	9	2264,160,109,169,240,147,75,81,460,	0,3024,3894,4351,4664,6188,7269,7791,12449,
#Partially deleted in new
chr1	20719731	20732837	chr1:20719731-20732837	0	-	20719731	20719731	8553170	6	2264,160,109,169,287,74,	0,3024,3894,4351,4617,13032,
#Partially deleted in new
chr1	20721527	20732536	chr1:20721527-20732536	3	-	20721791	20728044	789624	10	468,160,109,169,240,147,75,81,129,356,	0,1228,2098,2555,2868,4392,5473,5995,6430,10653,
#Partially deleted in new
chr1	20724600	20732278	chr1:20724600-20732278	0	-	20724600	20728044	789624	5	35,147,135,129,98,	0,1319,2868,3357,7580,
#Partially deleted in new
chr1	20724630	20732837	chr1:20724630-20732837	0	-	20724630	20728044	789624	6	5,147,75,81,129,74,	0,1289,2370,2892,3327,8133,
#Partially deleted in new
chr1	20725931	20731591	chr1:20725931-20731591	0	-	20725931	20728044	789624	5	135,75,81,129,144,	0,1069,1591,2026,5516,
#Partially deleted in new
chr1	20727031	20731175	chr1:20727031-20731175	0	-	20727031	20728044	789624	5	44,81,129,106,164,	0,491,926,3714,3980,
#Partially deleted in new
chr1	20732879	20733952	chr1:20732879-20733952	3	+	20732879	20732879	8553170	2	146,153,	0,920,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	20742660	20786688	chr1:20742660-20786688	3	-	20744796	20780440	0	13	2431,114,112,160,91,155,81,144,160,154,100,196,40,	0,2882,4883,7062,14505,22716,24923,28269,30790,33936,37151,37684,43988,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	20742681	20775005	chr1:20742681-20775005	1	-	20744796	20773504	0	9	2410,114,112,160,91,155,81,144,1555,	0,2861,4862,7041,14484,22695,24902,28248,30769,
#Partially deleted in new
chr1	20743134	20749747	chr1:20743134-20749747	0	-	20743134	20743134	8553170	5	40,348,114,112,25,	0,1609,2408,4409,6588,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	20745591	20750251	chr1:20745591-20750251	0	-	20745591	20745591	8553170	3	65,112,529,	0,1952,4131,
#Partially deleted in new
chr1	20747614	20776604	chr1:20747614-20776604	0	-	20747614	20776604	789624	7	41,160,91,155,144,160,8,	0,2108,9551,17762,23315,25836,28982,
#Partially deleted in new
chr1	20757165	20787272	chr1:20757165-20787272	0	-	20757165	20780440	789624	9	91,155,81,144,160,154,100,196,78,	0,8211,10418,13764,16285,19431,22646,23179,30029,
#Partially deleted in new
chr1	20757198	20787312	chr1:20757198-20787312	0	-	20757198	20779893	789624	8	58,155,81,144,160,154,100,118,	0,8178,10385,13731,16252,19398,22613,29996,
#Partially deleted in new
chr1	20773586	20786283	chr1:20773586-20786283	0	-	20773586	20780440	789624	5	24,154,100,196,98,	0,3010,6225,6758,12599,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	20775449	20780541	chr1:20775449-20780541	0	-	20775449	20775449	8553170	3	1301,100,197,	0,4362,4895,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	20775654	20786640	chr1:20775654-20786640	1	-	20775953	20780440	0	5	351,154,100,196,127,	0,942,4157,4690,10859,
#Partially deleted in new
chr1	20776697	20787323	chr1:20776697-20787323	0	-	20776697	20779893	789624	4	53,100,191,129,	0,3114,3652,10497,
#Partially deleted in new
chr1	20776712	20786652	chr1:20776712-20786652	0	-	20776712	20779893	789624	3	38,100,400,	0,3099,9540,
#Partially deleted in new
chr1	20776719	20786652	chr1:20776719-20786652	0	-	20776719	20780440	789624	4	31,100,196,400,	0,3092,3625,9533,
#Partially deleted in new
chr1	20779835	20786666	chr1:20779835-20786666	0	-	20779835	20779893	789624	2	76,481,	0,6350,
#Partially deleted in new
chr1	20806291	21176888	chr1:20806291-21176888	1	-	20807318	21002742	0	33	1209,147,82,147,99,82,126,173,116,221,118,94,95,133,105,237,147,198,171,120,134,247,89,109,123,98,115,180,96,129,76,184,167,	0,4446,6866,11100,18808,21325,22855,34564,43123,44966,47268,48686,51111,54093,55936,58184,58824,73031,79909,87225,89076,93405,98591,143711,163182,166710,174042,174756,196421,244574,282846,369883,370430,
#Partially deleted in new
chr1	20806469	21050994	chr1:20806469-21050994	3	-	20807318	21002742	0	31	1031,147,82,147,99,82,126,173,116,221,118,94,95,133,105,237,147,198,171,120,134,247,89,840,109,123,98,115,180,96,129,	0,4268,6688,10922,18630,21147,22677,34386,42945,44788,47090,48508,50933,53915,55758,58006,58646,72853,79731,87047,88898,93227,98413,135021,143533,163004,166532,173864,174578,196243,244396,
#Partially deleted in new
chr1	20806482	21176850	chr1:20806482-21176850	1	-	20807318	21002742	0	35	1018,147,82,147,99,82,126,173,116,221,118,94,95,133,105,237,147,198,171,120,134,247,89,840,106,123,98,115,180,21,96,129,76,184,129,	0,4255,6675,10909,18617,21134,22664,34373,42932,44775,47077,48495,50920,53902,55745,57993,58633,72840,79718,87034,88885,93214,98400,135008,143520,162991,166519,173851,174565,175905,196230,244383,282655,369692,370239,
#Partially deleted in new
chr1	20807003	21176847	chr1:20807003-21176847	1	-	20807318	21002742	789624	35	497,147,82,147,99,82,126,173,116,221,118,94,95,133,105,237,147,198,171,111,120,134,247,89,840,106,123,98,115,180,96,129,76,184,126,	0,3734,6154,10388,18096,20613,22143,33852,42411,44254,46556,47974,50399,53381,55224,57472,58112,72319,79197,85615,86513,88364,92693,97879,134487,142999,162470,165998,173330,174044,195709,243862,282134,369171,369718,
#Partially deleted in new
chr1	20807318	21176836	chr1:20807318-21176836	1	-	20807318	21176836	789624	34	182,147,82,147,99,82,126,173,116,221,118,94,95,133,105,237,147,198,171,120,134,247,89,840,106,123,98,115,180,96,129,76,184,115,	0,3419,5839,10073,17781,20298,21828,33537,42096,43939,46241,47659,50084,53066,54909,57157,57797,72004,78882,86198,88049,92378,97564,134172,142684,162155,165683,173015,173729,195394,243547,281819,368856,369403,
#Partially deleted in new
chr1	20825103	20847945	chr1:20825103-20847945	0	-	20825103	20825103	8553170	5	95,82,126,173,140,	0,2513,4043,15752,22702,
#Deleted in new
chr1	20841240	20841302	chr1:20841240-20841302	3	+	20841240	20841240	8553170	1	62,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	20893110	20941398	chr1:20893110-20941398	0	-	20893110	20893110	8553170	5	526,134,247,89,140,	0,2257,6586,11772,48148,
#Partially deleted in new
chr1	20929369	20941484	chr1:20929369-20941484	0	-	20929369	20929369	8553170	2	223,226,	0,11889,
#Partially deleted in new
chr1	20941241	21174737	chr1:20941241-21174737	1	-	20941375	21002742	0	15	154,840,109,123,98,115,180,33,96,129,76,61,79,58,28,	0,249,8761,28232,31760,39092,39806,56359,61471,109624,147896,170081,226719,228422,233468,
#Partially deleted in new
chr1	20950005	21176884	chr1:20950005-21176884	0	-	20950005	21002742	789624	10	106,123,98,115,180,96,129,76,184,163,	0,19468,22996,30328,31042,52707,100860,139132,226169,226716,
#Partially deleted in new
chr1	20969473	21176857	chr1:20969473-21176857	0	-	20969473	21002742	789624	9	123,98,115,180,114,96,76,184,136,	0,3528,10860,11574,31725,33239,119664,206701,207248,
#Partially deleted in new
chr1	20973046	20982445	chr1:20973046-20982445	0	-	20973046	20973046	8553170	4	53,115,180,58,	0,7287,8001,9341,
#Deleted in new
chr1	21003549	21003934	chr1:21003549-21003934	7	-	21003549	21003549	16724991	1	385,	0,
#Partially deleted in new
chr1	21064530	21111610	chr1:21064530-21111610	0	-	21064530	21064530	8553170	4	115,232,76,288,	0,229,24607,46792,
#Deleted in new
chr1	21073638	21073753	chr1:21073638-21073753	7	-	21073638	21073638	16724991	1	115,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	21161474	21162081	chr1:21161474-21162081	7	+	21161474	21161474	16724991	2	202,94,	0,513,
#Deleted in new
chr1	21175113	21176819	chr1:21175113-21176819	0	-	21175113	21175113	8553170	2	1245,98,	0,1608,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	21217246	21345504	chr1:21217246-21345504	1	-	21219954	21345378	0	19	2885,96,191,68,111,104,78,99,111,115,143,192,66,147,122,213,142,87,129,	0,4500,8003,9912,10684,16311,18603,19499,20887,27742,29974,38700,40278,41446,43024,55452,61944,72823,128129,
#Partially deleted in new
chr1	21217280	21345572	chr1:21217280-21345572	1	-	21217710	21345378	8553170	20	698,173,96,191,68,111,104,78,99,111,115,143,192,66,147,122,213,142,87,197,	0,2678,4466,7969,9878,10650,16277,18569,19465,20853,27708,29940,38666,40244,41412,42990,55418,61910,72789,128095,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	21218583	21279549	chr1:21218583-21279549	1	-	21219954	21279434	0	17	1548,96,191,68,111,104,78,99,111,115,143,192,66,147,122,213,359,	0,3163,6666,8575,9347,14974,17266,18162,19550,26405,28637,37363,38941,40109,41687,54115,60607,
#Partially deleted in new
chr1	21219813	21222081	chr1:21219813-21222081	0	-	21219813	21219813	8553170	2	318,335,	0,1933,
#Partially deleted in new
chr1	21219858	21290489	chr1:21219858-21290489	3	-	21219954	21290414	0	19	273,96,191,68,111,104,78,99,111,115,143,192,66,147,122,213,142,87,126,	0,1888,5391,7300,8072,13699,15991,16887,18275,25130,27362,36088,37666,38834,40412,52840,59332,70211,70505,
#Partially deleted in new
chr1	21219893	21290464	chr1:21219893-21290464	1	-	21219954	21290414	789624	18	238,191,68,111,104,78,99,111,115,143,192,66,147,122,213,142,87,101,	0,5356,7265,8037,13664,15956,16852,18240,25095,27327,36053,37631,38799,40377,52805,59297,70176,70470,
#Partially deleted in new
chr1	21219936	21290257	chr1:21219936-21290257	1	-	21219954	21290198	0	18	195,96,191,68,111,104,78,99,111,115,143,192,66,147,122,213,142,188,	0,1810,5313,7222,7994,13621,15913,16809,18197,25052,27284,36010,37588,38756,40334,52762,59254,70133,
#Partially deleted in new
chr1	21233104	21290463	chr1:21233104-21290463	0	-	21233104	21233104	8553170	14	557,78,99,111,115,143,192,66,147,122,213,142,87,100,	0,2745,3641,5029,11884,14116,22842,24420,25588,27166,39594,46086,56965,57259,
#Partially deleted in new
chr1	21233569	21238350	chr1:21233569-21238350	0	-	21233569	21233569	8553170	4	92,78,99,217,	0,2280,3176,4564,
#Partially deleted in new
chr1	21238148	21256717	chr1:21238148-21256717	0	-	21238148	21238148	8553170	5	96,115,143,192,30,	0,6840,9072,17798,18539,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	21260312	21280069	chr1:21260312-21280069	0	-	21260312	21272849	789624	4	80,213,142,239,	0,12386,18878,19518,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	21266081	21267251	chr1:21266081-21267251	3	+	21266081	21266081	8553170	3	54,265,404,	0,408,766,
#Partially deleted in new
chr1	21272745	21298999	chr1:21272745-21298999	0	-	21272745	21298825	789624	4	166,142,87,183,	0,6445,17324,26071,
#Partially deleted in new
chr1	21272831	21294424	chr1:21272831-21294424	0	-	21272831	21290156	789624	4	80,142,87,271,	0,6359,17238,21322,
#Partially deleted in new
chr1	21272834	21345137	chr1:21272834-21345137	0	-	21272834	21272834	8553170	4	77,142,87,201,	0,6356,17235,72102,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	21293289	21299774	chr1:21293289-21299774	3	+	21293289	21293289	789624	3	454,277,1748,	0,644,4737,
#Partially deleted in new
chr1	21397986	21398362	chr1:21397986-21398362	7	+	21397986	21397986	16724991	1	376,	0,
#Deleted in new
chr1	21411459	21413293	chr1:21411459-21413293	7	-	21411459	21411459	16724991	2	530,119,	0,1715,
#Deleted in new
chr1	21415897	21417492	chr1:21415897-21417492	3	+	21415897	21415897	8553170	3	38,294,275,	0,428,1320,
#Deleted in new
chr1	21416321	21417374	chr1:21416321-21417374	0	+	21416321	21416321	8553170	3	298,150,157,	0,650,896,
#Deleted in new
chr1	21424624	21427967	chr1:21424624-21427967	7	-	21424624	21424624	16724991	5	204,52,172,52,181,	0,846,1614,2400,3162,
#Deleted in new
chr1	21428302	21429536	chr1:21428302-21429536	7	+	21428302	21428302	16724991	1	1234,	0,
#Partially deleted in new
chr1	21434317	21437558	chr1:21434317-21437558	7	+	21434317	21434317	16724991	5	223,103,82,259,163,	0,978,1749,2253,3078,
#Partially deleted in new
chr1	21440127	21483467	chr1:21440127-21483467	1	+	21445086	21483386	789624	14	221,272,103,215,73,206,52,164,52,173,52,173,52,325,	0,4820,30504,31441,32715,33252,34772,38016,39221,39923,40802,41469,42356,43015,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	21440130	21442358	chr1:21440130-21442358	0	+	21440130	21440130	8553170	3	248,118,119,	0,666,2109,
#Partially deleted in new
chr1	21440136	21485005	chr1:21440136-21485005	0	+	21445086	21466115	789624	18	212,272,70,314,145,210,103,215,73,206,52,164,52,173,52,173,52,1863,	0,4811,25950,26859,28304,28551,30495,31432,32706,33243,34763,38007,39212,39914,40793,41460,42347,43006,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	21440137	21454306	chr1:21440137-21454306	0	+	21440137	21440137	8553170	3	211,272,934,	0,4810,13235,
#Partially deleted in new
chr1	21440145	21446482	chr1:21440145-21446482	0	+	21440145	21440145	8553170	3	203,272,446,	0,4802,5891,
#Partially deleted in new
chr1	21440163	21484900	chr1:21440163-21484900	1	+	21445086	21483386	789624	15	185,272,210,103,215,73,206,52,128,52,173,52,173,52,1758,	0,4784,28524,30468,31405,32679,33216,34736,37905,39185,39887,40766,41433,42320,42979,
#Partially deleted in new
chr1	21440237	21468894	chr1:21440237-21468894	0	+	21445086	21466115	789624	6	111,272,70,128,145,207,	0,4710,25849,26944,28203,28450,
#Partially deleted in new
chr1	21440312	21484900	chr1:21440312-21484900	3	+	21445086	21483386	789624	15	36,272,210,103,215,73,206,52,164,52,173,52,173,52,1758,	0,4635,28375,30319,31256,32530,33067,34587,37831,39036,39738,40617,41284,42171,42830,
#Partially deleted in new
chr1	21444943	21483318	chr1:21444943-21483318	0	+	21445086	21449887	789624	19	276,30,143,252,180,145,210,103,215,73,206,52,164,52,173,52,173,52,176,	0,4915,6823,14805,23211,23497,23744,25688,26625,27899,28436,29956,33200,34405,35107,35986,36653,37540,38199,
#Partially deleted in new
chr1	21444991	21451858	chr1:21444991-21451858	0	+	21445086	21449798	789624	3	228,98,92,	0,4799,6775,
#Deleted in new
chr1	21459755	21460082	chr1:21459755-21460082	7	-	21459755	21459755	16724991	1	327,	0,
#Partially deleted in new
chr1	21468549	21483412	chr1:21468549-21483412	1	+	21468722	21483386	789624	14	36,210,103,215,73,206,52,164,52,173,52,173,52,270,	0,138,2082,3019,4293,4830,6350,9594,10799,11501,12380,13047,13934,14593,
#Partially deleted in new
chr1	21473376	21483307	chr1:21473376-21483307	0	+	21473376	21473376	8553170	9	209,52,53,52,173,52,173,52,165,	0,1523,4767,5972,6674,7553,8220,9107,9766,
#Partially deleted in new
chr1	21473394	21480221	chr1:21473394-21480221	0	+	21473394	21473394	8553170	5	191,52,84,52,171,	0,1505,4749,5954,6656,
#Partially deleted in new
chr1	21509371	21578412	chr1:21509371-21578412	3	+	21554081	21577648	789624	12	146,165,120,116,175,176,144,70,135,192,120,1030,	0,44606,51254,51725,53738,54669,58732,60933,64293,66361,67150,68011,
#Partially deleted in new
chr1	21509396	21564211	chr1:21509396-21564211	0	+	21509396	21509396	8553170	5	121,120,116,175,171,	0,51229,51700,53713,54644,
#Partially deleted in new
chr1	21509425	21578399	chr1:21509425-21578399	1	+	21560679	21577648	789624	10	92,120,175,176,144,70,135,192,120,1017,	0,51200,53684,54615,58678,60879,64239,66307,67096,67957,
#Partially deleted in new
chr1	21509427	21578175	chr1:21509427-21578175	1	+	21560729	21577648	789624	11	90,120,116,175,176,144,70,135,192,120,793,	0,51198,51669,53682,54613,58676,60877,64237,66305,67094,67955,
#Partially deleted in new
chr1	21551278	21578012	chr1:21551278-21578012	1	+	21554081	21577648	789624	12	150,165,120,116,175,176,144,70,135,192,120,630,	0,2699,9347,9818,11831,12762,16825,19026,22386,24454,25243,26104,
#Partially deleted in new
chr1	21570302	21577731	chr1:21570302-21577731	0	+	21570302	21577648	789624	4	72,192,120,349,	0,5430,6219,7080,
#Partially deleted in new
chr1	21574477	21578399	chr1:21574477-21578399	0	+	21574477	21574477	8553170	4	266,192,120,1017,	0,1255,2044,2905,
#Partially deleted in new
chr1	21586471	21591187	chr1:21586471-21591187	3	+	21586471	21586471	8553170	2	618,203,	0,4513,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr1	21596214	21669363	chr1:21596214-21669363	1	-	21598449	21620032	789624	27	1050,43,104,103,82,37,114,110,255,132,138,87,72,156,130,101,84,54,79,104,186,39,48,36,94,36,110,	0,1471,1746,2185,3279,3366,5469,6589,7443,9851,11998,12635,13360,13905,15237,15501,15811,16961,17413,17771,21091,21719,22810,23800,30089,53546,73039,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr1	21596220	21622568	chr1:21596220-21622568	1	-	21597719	21622413	789624	23	1044,43,104,103,124,114,110,132,138,87,72,156,130,101,84,54,79,104,186,39,48,36,230,	0,1465,1740,2179,3273,5463,6583,9845,11992,12629,13354,13899,15231,15495,15805,16955,17407,17765,21085,21713,22804,23794,26118,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr1	21596220	21620041	chr1:21596220-21620041	1	-	21597719	21620032	789624	23	1044,43,104,103,124,114,110,255,132,138,87,72,156,130,101,84,54,79,104,186,39,48,27,	0,1465,1740,2179,3273,5463,6583,7437,9845,11992,12629,13354,13899,15231,15495,15805,16955,17407,17765,21085,21713,22804,23794,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr1	21596220	21669306	chr1:21596220-21669306	3	-	21597719	21620032	0	25	1044,43,104,103,124,114,110,132,138,87,72,156,130,101,84,54,79,104,186,39,48,36,94,36,53,	0,1465,1740,2179,3273,5463,6583,9845,11992,12629,13354,13899,15231,15495,15805,16955,17407,17765,21085,21713,22804,23794,30083,53540,73033,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr1	21596220	21651820	chr1:21596220-21651820	0	-	21598416	21620032	789624	25	1044,43,135,50,124,114,110,132,138,87,72,156,130,101,84,54,79,104,186,39,48,36,94,36,42,	0,1465,1740,2179,3273,5463,6583,9845,11992,12629,13354,13899,15231,15495,15805,16955,17407,17765,21085,21713,22804,23794,30083,53540,55558,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr1	21596221	21669301	chr1:21596221-21669301	1	-	21597719	21620032	0	27	1043,43,80,103,124,114,110,78,132,138,87,72,156,130,101,84,54,79,104,186,39,48,36,94,36,107,48,	0,1464,1739,2178,3272,5462,6582,7613,9844,11991,12628,13353,13898,15230,15494,15804,16954,17406,17764,21084,21712,22803,23793,30082,53539,68989,73032,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr1	21596221	21669300	chr1:21596221-21669300	0	-	21596221	21596221	8553170	25	1043,43,135,103,124,114,1109,132,138,87,72,156,130,101,84,54,79,104,186,39,48,36,94,36,47,	0,1464,1739,2178,3272,5462,6582,9844,11991,12628,13353,13898,15230,15494,15804,16954,17406,17764,21084,21712,22803,23793,30082,53539,73032,
#Partially deleted in new
chr1	21597007	21651836	chr1:21597007-21651836	1	-	21597719	21651822	0	25	257,43,104,103,124,114,110,132,138,87,72,156,130,101,84,54,79,104,186,39,48,36,94,36,58,	0,678,953,1392,2486,4676,5796,9058,11205,11842,12567,13112,14444,14708,15018,16168,16620,16978,20298,20926,22017,23007,29296,52753,54771,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	21613035	21651903	chr1:21613035-21651903	0	-	21613035	21613035	8553170	10	194,79,104,186,39,48,36,94,36,512,	0,592,950,4270,4898,5989,6979,13268,36725,38356,
#Partially deleted in new
chr1	21617306	21669308	chr1:21617306-21669308	0	-	21617306	21620032	789624	8	185,39,48,36,94,36,107,55,	0,627,1718,2708,8997,32454,47904,51947,
#Partially deleted in new
chr1	21617931	21653307	chr1:21617931-21653307	0	-	21617931	21620032	789624	6	41,48,36,94,36,174,	0,1093,2083,8372,31829,35202,
#Partially deleted in new
chr1	21620040	21667681	chr1:21620040-21667681	0	-	21620040	21620040	8553170	5	10,94,36,107,84,	0,6263,29720,45170,47557,
#Partially deleted in new
chr1	21622922	21669283	chr1:21622922-21669283	0	-	21622922	21622922	8553170	6	59,94,36,107,83,30,	0,3381,26838,42288,45588,46331,
#Partially deleted in new
chr1	21678297	21783195	chr1:21678297-21783195	1	-	21679416	21782957	789624	26	1142,27,49,126,105,107,131,111,62,123,125,69,131,115,198,150,129,180,83,134,109,125,128,157,121,372,	0,2510,8893,11676,23200,25214,25964,27429,27828,28169,28446,37091,42738,43352,45600,50272,51406,58148,68769,69840,73209,74229,74694,78248,79365,104526,
#Partially deleted in new
chr1	21678578	21783606	chr1:21678578-21783606	3	-	21679416	21782957	789624	27	861,27,49,126,156,105,107,131,111,62,123,125,69,131,115,198,150,129,180,83,134,109,125,128,157,121,783,	0,2229,8612,11395,16487,22919,24933,25683,27148,27547,27888,28165,36810,42457,43071,45319,49991,51125,57867,68488,69559,72928,73948,74413,77967,79084,104245,
#Partially deleted in new
chr1	21678902	21725119	chr1:21678902-21725119	1	-	21679416	21724162	789624	15	537,27,49,126,105,107,131,111,62,123,125,69,128,115,1222,	0,1905,8288,11071,22595,24609,25359,26824,27223,27564,27841,36486,42133,42747,44995,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	21679198	21681252	chr1:21679198-21681252	0	-	21679198	21679198	8553170	2	241,445,	0,1609,
#Partially deleted in new
chr1	21679366	21782991	chr1:21679366-21782991	1	-	21679416	21782957	789624	27	73,27,49,126,156,105,107,131,111,62,123,164,69,131,115,198,150,126,180,83,134,109,125,128,157,121,168,	0,1441,7824,10607,15699,22131,24145,24895,26360,26759,27100,27377,36022,41669,42283,44531,49203,50337,57079,67700,68771,72140,73160,73625,77179,78296,103457,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	21685891	21704615	chr1:21685891-21704615	0	-	21685891	21685891	8553170	5	1348,126,156,105,354,	0,4082,9174,15606,18370,
#Partially deleted in new
chr1	21715123	21721146	chr1:21715123-21721146	0	-	21715123	21715123	8553170	2	334,111,	0,5912,
#Partially deleted in new
chr1	21721035	21726570	chr1:21721035-21726570	0	-	21721035	21721035	8553170	4	131,115,198,80,	0,614,2862,5455,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	21723897	21732836	chr1:21723897-21732836	0	-	21723897	21729761	789624	4	198,150,126,75,	0,4672,5806,8864,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	21723971	21732826	chr1:21723971-21732826	0	-	21723971	21732700	789624	4	124,150,129,163,	0,4598,5732,8692,
#Partially deleted in new
chr1	21727850	21783606	chr1:21727850-21783606	1	-	21728561	21782957	789624	11	869,129,180,83,134,109,125,128,157,121,783,	0,1853,8595,19216,20287,23656,24676,25141,28695,29812,54973,
#Partially deleted in new
chr1	21728611	21748191	chr1:21728611-21748191	0	-	21729819	21748191	789624	5	108,129,196,83,54,	0,1092,7818,18455,19526,
#Partially deleted in new
chr1	21753006	21782020	chr1:21753006-21782020	0	-	21753006	21756576	789624	4	113,157,121,163,	0,3539,4656,28851,
#Partially deleted in new
chr1	21753034	21783226	chr1:21753034-21783226	0	-	21753034	21756576	789624	5	85,157,121,68,249,	0,3511,4628,29789,29943,
#Partially deleted in new
chr1	21757460	21782943	chr1:21757460-21782943	0	-	21757460	21757460	8553170	2	323,120,	0,25363,
#Partially deleted in new
chr1	21768268	21768575	chr1:21768268-21768575	7	+	21768268	21768268	16724991	1	307,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	21812264	21825221	chr1:21812264-21825221	3	+	21812451	21822215	789624	5	272,426,132,162,3020,	0,2133,3678,9185,9937,
#Partially deleted in new
chr1	21812362	21823963	chr1:21812362-21823963	1	+	21812451	21822215	789624	6	174,426,132,162,232,54,	0,2035,3580,9087,9839,11547,
#Deleted in new
chr1	21821496	21822548	chr1:21821496-21822548	0	+	21821496	21821496	8553170	2	115,825,	0,227,
#Partially deleted in new
chr1	21822244	21937297	chr1:21822244-21937297	3	-	21823315	21937217	0	97	1244,104,84,71,79,76,57,123,172,245,222,99,109,110,100,145,112,117,148,110,267,98,205,261,180,196,185,135,141,142,152,142,152,148,152,139,152,136,152,139,152,136,152,136,146,133,152,151,155,136,143,153,126,181,101,111,168,59,87,128,114,231,81,93,192,141,95,50,87,128,114,112,119,180,177,141,68,59,87,128,148,197,180,164,147,152,145,132,120,255,129,161,59,110,45,136,143,	0,1371,1876,2061,2292,2459,5618,5785,6010,6590,7138,7748,8737,8970,9218,9407,10250,11023,11222,11571,12434,13295,14557,16580,17126,17577,18856,19294,19757,19994,20525,21052,21903,23863,24203,25109,25444,25713,26398,26648,27796,28118,29301,29546,29843,30455,30674,31948,32366,32603,33059,33278,33542,34770,35040,37321,37590,37932,39512,39743,41855,42598,43040,43472,49941,50375,50752,51130,51680,52161,52371,52646,53384,53618,53984,54267,55941,56188,56332,56749,57862,58118,58411,59094,62283,62522,62768,63075,64970,65175,65693,67736,68182,68340,73677,73930,114910,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	21822244	21830713	chr1:21822244-21830713	0	-	21822244	21822244	8553170	11	1244,104,84,71,79,76,57,123,172,245,1331,	0,1371,1876,2061,2292,2459,5618,5785,6010,6590,7138,
#Deleted in new
chr1	21823300	21824266	chr1:21823300-21824266	0	-	21823300	21823300	8553170	2	188,651,	0,315,
#Partially deleted in new
chr1	21829992	21833577	chr1:21829992-21833577	0	-	21829992	21833577	789624	9	99,109,110,100,145,112,18,117,111,	0,989,1222,1470,1659,2502,2882,3275,3474,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	21833115	21836917	chr1:21833115-21836917	0	-	21833115	21833115	8553170	5	269,148,110,959,116,	0,351,700,1563,3686,
#Partially deleted in new
chr1	21835408	21839006	chr1:21835408-21839006	0	-	21835491	21839006	789624	2	229,182,	0,3416,
#Partially deleted in new
chr1	21846195	21847958	chr1:21846195-21847958	0	-	21846195	21846195	8553170	4	60,152,139,270,	0,252,1158,1493,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	21851310	21854656	chr1:21851310-21854656	0	-	21851310	21851310	8553170	4	280,107,151,46,	0,1653,2882,3300,
#Partially deleted in new
chr1	21865716	21872377	chr1:21865716-21872377	0	-	21865716	21872377	789624	6	93,84,198,102,39,192,	0,3168,3749,4496,5117,6469,
#Partially deleted in new
chr1	21872858	21874706	chr1:21872858-21874706	0	-	21872858	21874706	789624	5	233,50,87,128,91,	0,516,1066,1547,1757,
#Deleted in new
chr1	21874477	21875208	chr1:21874477-21875208	0	-	21874477	21874477	8553170	3	56,114,318,	0,138,413,
#Partially deleted in new
chr1	21887232	21896310	chr1:21887232-21896310	0	-	21887232	21887232	8553170	6	102,255,129,161,45,136,	0,187,705,2748,8689,8942,
#Partially deleted in new
chr1	21887234	21890694	chr1:21887234-21890694	0	-	21887234	21890694	8553170	7	100,255,129,51,161,59,110,	0,185,703,1433,2746,3192,3350,
#Partially deleted in new
chr1	21889815	21896271	chr1:21889815-21896271	0	-	21889815	21889815	8553170	5	326,59,110,45,97,	0,611,769,6106,6359,
#Partially deleted in new
chr1	21908097	21908580	chr1:21908097-21908580	7	+	21908097	21908097	16724991	1	483,	0,
#Partially deleted in new
chr1	21950678	21956871	chr1:21950678-21956871	7	-	21950678	21950678	16724991	2	972,190,	0,6003,
#Deleted in new
chr1	21950734	21951578	chr1:21950734-21951578	5	-	21950734	21950734	16724991	1	844,	0,
#Partially deleted in new
chr1	21977020	21989344	chr1:21977020-21989344	3	+	21977039	21989279	789624	8	62,86,98,135,137,143,153,83,	0,1348,3803,4017,6673,7168,9510,12241,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	21977892	21983777	chr1:21977892-21983777	0	+	21977892	21977892	8553170	5	94,86,98,135,84,	0,476,2931,3145,5801,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	21981101	21998642	chr1:21981101-21998642	0	+	21981101	21998189	789624	5	71,137,143,153,492,	0,2592,3087,5429,17049,
#Partially deleted in new
chr1	21983605	22030617	chr1:21983605-22030617	3	+	21983605	21983605	8553170	9	225,143,153,98,135,143,153,81,338,	0,583,2925,21841,22056,23767,26099,41686,46674,
#Partially deleted in new
chr1	21984265	21989354	chr1:21984265-21989354	0	+	21984265	21984265	8553170	4	66,153,48,93,	0,2265,2698,4996,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	21987480	21987777	chr1:21987480-21987777	3	+	21987480	21987480	8553170	1	297,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	21987815	21987919	chr1:21987815-21987919	3	+	21987815	21987815	8553170	1	104,	0,
#Partially deleted in new
chr1	22001655	22012522	chr1:22001655-22012522	3	+	22001674	22012467	789624	8	62,86,98,135,137,143,153,73,	0,1347,3791,4006,5222,5717,8049,10794,
#Partially deleted in new
chr1	22001659	22006068	chr1:22001659-22006068	0	+	22001659	22001659	8553170	4	58,86,98,407,	0,1343,3787,4002,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	22005304	22030617	chr1:22005304-22030617	0	+	22005304	22005304	8553170	4	240,153,81,338,	0,4400,19987,24975,
#Partially deleted in new
chr1	22007449	22012539	chr1:22007449-22012539	0	+	22007449	22010146	789624	4	66,153,48,90,	0,2255,2688,5000,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	22010649	22010946	chr1:22010649-22010946	3	+	22010649	22010649	8553170	1	297,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	22010984	22011088	chr1:22010984-22011088	3	+	22010984	22010984	8553170	1	104,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	22023989	22026048	chr1:22023989-22026048	0	-	22023989	22023989	789624	3	456,161,85,	0,816,1974,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	22023996	22025483	chr1:22023996-22025483	3	-	22023996	22023996	8553170	3	449,150,424,	0,809,1063,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	22024557	22031223	chr1:22024557-22031223	0	+	22024557	22024557	8553170	3	379,81,944,	0,734,5722,
#Partially deleted in new
chr1	22025187	22031023	chr1:22025187-22031023	0	+	22025187	22025187	789624	2	185,744,	0,5092,
#Partially deleted in new
chr1	22025492	22031223	chr1:22025492-22031223	0	+	22025492	22025492	8553170	3	453,121,944,	0,1921,4787,
#Partially deleted in new
chr1	22025497	22031219	chr1:22025497-22031219	0	+	22025497	22025497	8553170	2	448,940,	0,4782,
#Partially deleted in new
chr1	22025510	22031223	chr1:22025510-22031223	0	+	22025510	22025510	789624	2	133,944,	0,4769,
#Partially deleted in new
chr1	22025510	22030800	chr1:22025510-22030800	0	+	22025510	22025510	789624	3	129,121,521,	0,1903,4769,
#Partially deleted in new
chr1	22025510	22030617	chr1:22025510-22030617	0	+	22025510	22025510	8553170	4	129,121,99,338,	0,1903,2171,4769,
#Partially deleted in new
chr1	22025510	22030617	chr1:22025510-22030617	0	+	22025510	22025510	8553170	2	609,338,	0,4769,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	22025510	22101360	chr1:22025510-22101360	3	+	22078478	22091517	789624	6	129,155,73,110,198,9933,	0,52918,56211,60928,61158,65917,
#Partially deleted in new
chr1	22025521	22030374	chr1:22025521-22030374	0	+	22025521	22025521	8553170	3	122,121,95,	0,1892,4758,
#Partially deleted in new
chr1	22025531	22031223	chr1:22025531-22031223	0	+	22025531	22025531	8553170	3	112,133,944,	0,2996,4748,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	22025537	22030617	chr1:22025537-22030617	0	+	22025537	22025537	8553170	2	1112,338,	0,4742,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	22025552	22030617	chr1:22025552-22030617	0	+	22025552	22025552	8553170	3	87,966,338,	0,1861,4727,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	22028316	22052927	chr1:22028316-22052927	3	-	22028316	22028316	8553170	3	366,2067,141,	0,1484,24470,
#Deleted in new
chr1	22030526	22030748	chr1:22030526-22030748	7	+	22030526	22030526	16724991	1	222,	0,
#Deleted in new
chr1	22030655	22031126	chr1:22030655-22031126	7	+	22030655	22030655	16724991	3	36,249,180,	0,38,291,
#Partially deleted in new
chr1	22052626	22092923	chr1:22052626-22092923	1	+	22078478	22091517	0	6	242,155,73,110,198,1496,	0,25802,29095,33812,34042,38801,
#Partially deleted in new
chr1	22052688	22090804	chr1:22052688-22090804	3	+	22078478	22090032	0	6	54,155,73,110,198,862,	0,25740,29033,33750,33980,37254,
#Partially deleted in new
chr1	22052706	22090010	chr1:22052706-22090010	0	+	22078478	22078726	8553170	7	36,155,176,73,110,198,68,	0,25722,25999,29015,33732,33962,37236,
#Partially deleted in new
chr1	22053296	22086790	chr1:22053296-22086790	0	+	22078478	22086790	789624	5	137,155,73,110,122,	0,25132,28425,33142,33372,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	22059196	22064199	chr1:22059196-22064199	3	+	22059196	22059196	8553170	2	490,202,	0,4801,
#Deleted in new
chr1	22068339	22068827	chr1:22068339-22068827	7	-	22068339	22068339	16724991	1	488,	0,
#Partially deleted in new
chr1	22117304	22142966	chr1:22117304-22142966	3	-	22120049	22142922	789624	5	3213,143,132,236,121,	0,3906,4140,12311,25541,
#Partially deleted in new
chr1	22127037	22129851	chr1:22127037-22129851	0	-	22127266	22129851	789624	2	444,236,	0,2578,
#Partially deleted in new
chr1	22127473	22143969	chr1:22127473-22143969	0	-	22127473	22129763	789624	3	8,236,238,	0,2142,16258,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	22142849	22157401	chr1:22142849-22157401	3	+	22142849	22142849	8553170	5	55,122,107,101,426,	0,12053,12947,13587,14126,
#Deleted in new
chr1	22266238	22266300	chr1:22266238-22266300	3	+	22266238	22266238	5263520	1	62,	0,
#Deleted in new
chr1	22322839	22323331	chr1:22322839-22323331	7	-	22322839	22322839	16724991	1	492,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	22364629	22366482	chr1:22364629-22366482	3	-	22364629	22364629	8553170	1	1853,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	22428837	22511763	chr1:22428837-22511763	0	+	22489948	22511763	8553170	9	177,766,134,193,137,202,134,169,88,	0,61042,62562,77211,79163,79692,80262,82341,82838,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	22451850	22531157	chr1:22451850-22531157	1	+	22489948	22526396	789624	16	154,766,134,193,137,202,134,169,459,207,165,215,163,87,227,4956,	0,38029,39549,54198,56150,56679,57249,59328,59825,61073,65449,68210,69645,70526,72367,74351,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	22451850	22531157	chr1:22451850-22531157	3	+	22489948	22526396	789624	19	154,288,766,134,193,143,193,137,202,134,169,459,207,165,215,163,87,227,4956,	0,808,38029,39549,49641,50448,54198,56150,56679,57249,59328,59825,61073,65449,68210,69645,70526,72367,74351,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	22451866	22531154	chr1:22451866-22531154	1	+	22489948	22526396	789624	18	138,766,134,193,143,193,137,202,134,169,459,207,165,215,163,87,227,4953,	0,38013,39533,49625,50432,54182,56134,56663,57233,59312,59809,61057,65433,68194,69629,70510,72351,74335,
#Partially deleted in new
chr1	22451866	22506241	chr1:22451866-22506241	0	+	22489948	22506241	789624	7	138,288,766,134,193,143,193,	0,792,38013,39533,49625,50432,54182,
#Deleted in new
chr1	22517473	22519708	chr1:22517473-22519708	3	+	22517473	22517473	8553170	2	170,103,	0,2132,
#Partially deleted in new
chr1	22563563	22603594	chr1:22563563-22603594	3	+	22563635	22601741	0	17	166,65,664,156,336,125,163,94,68,165,186,62,210,150,191,174,1968,	0,5725,12653,22916,25307,29762,29960,31666,32542,33748,34112,34587,35274,37097,37334,37736,38063,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	22563563	22589621	chr1:22563563-22589621	1	+	22563635	22589379	0	5	166,65,664,156,751,	0,5725,12653,22916,25307,
#Deleted in new
chr1	22633257	22633366	chr1:22633257-22633366	3	-	22633257	22633257	5263520	1	109,	0,
#Partially deleted in new
chr1	22636505	22639608	chr1:22636505-22639608	3	+	22637616	22639407	0	3	197,170,776,	0,1104,2327,
#Partially deleted in new
chr1	22636761	22639331	chr1:22636761-22639331	0	+	22637616	22639331	789624	3	99,170,499,	0,848,2071,
#Partially deleted in new
chr1	22637579	22639608	chr1:22637579-22639608	1	+	22637616	22639407	0	2	200,776,	0,1253,
#Partially deleted in new
chr1	22643629	22648110	chr1:22643629-22648110	3	+	22644023	22647783	0	3	85,194,884,	0,381,3597,
#Partially deleted in new
chr1	22643632	22648110	chr1:22643632-22648110	1	+	22644023	22647783	0	3	105,194,884,	0,378,3594,
#Partially deleted in new
chr1	22643652	22647887	chr1:22643652-22647887	1	+	22644023	22647783	0	3	234,194,661,	0,358,3574,
#Partially deleted in new
chr1	22652761	22661090	chr1:22652761-22661090	0	+	22659462	22661090	789624	3	194,204,279,	0,6678,8050,
#Partially deleted in new
chr1	22652980	22661538	chr1:22652980-22661538	1	+	22659462	22661386	789624	3	323,204,727,	0,6459,7831,
#Partially deleted in new
chr1	22653188	22661536	chr1:22653188-22661536	3	+	22659456	22661386	0	3	115,204,725,	0,6251,7623,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	22653188	22661316	chr1:22653188-22661316	0	+	22659462	22661316	789624	4	115,153,204,505,	0,819,6251,7623,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	22710838	22891265	chr1:22710838-22891265	1	+	22710982	22891149	789624	7	205,65,685,156,336,125,137,	0,70582,73553,152198,154038,171520,180290,
#Partially deleted in new
chr1	22710964	22913743	chr1:22710964-22913743	1	+	22710982	22913570	0	16	79,65,685,156,336,125,163,109,65,123,248,216,150,194,156,282,	0,70456,73427,152072,153912,171394,181919,184507,185449,195022,195745,196988,198057,199417,201479,202497,
#Partially deleted in new
chr1	22710964	22921500	chr1:22710964-22921500	1	+	22710982	22913870	0	17	79,65,685,156,336,125,163,109,65,123,248,216,150,194,156,103,7843,	0,70456,73427,152072,153912,171394,181919,184507,185449,195022,195745,196988,198057,199417,201479,202497,202693,
#Partially deleted in new
chr1	22710969	22914270	chr1:22710969-22914270	3	+	22710982	22913570	0	16	74,65,685,156,336,125,163,109,68,123,248,216,150,194,156,809,	0,70451,73422,152067,153907,171389,181914,184502,185441,195017,195740,196983,198052,199412,201474,202492,
#Partially deleted in new
chr1	22719516	22719598	chr1:22719516-22719598	3	+	22719516	22719516	5263520	1	82,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	22775177	22913752	chr1:22775177-22913752	1	+	22775201	22912603	789624	15	67,65,685,156,336,125,166,109,65,123,248,216,150,194,1309,	0,6243,9214,87859,89699,107181,117703,120294,121236,130809,131532,132775,133844,135204,137266,
#Partially deleted in new
chr1	22800239	22896478	chr1:22800239-22896478	0	+	22800239	22800239	8553170	7	52,156,336,125,163,109,65,	0,62797,64637,82119,92644,95232,96174,
#Deleted in new
chr1	22835712	22836849	chr1:22835712-22836849	3	-	22835712	22835712	8553170	2	299,181,	0,956,
#Deleted in new
chr1	22863158	22863226	chr1:22863158-22863226	3	-	22863158	22863158	5263520	1	68,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	22865158	22882840	chr1:22865158-22882840	0	+	22865158	22865158	8553170	2	54,482,	0,17200,
#Partially deleted in new
chr1	22953042	22965338	chr1:22953042-22965338	3	-	22953042	22965338	789624	6	982,106,236,158,110,49,	0,2278,5642,6899,10064,12247,
#Partially deleted in new
chr1	22953048	22963178	chr1:22953048-22963178	1	-	22953048	22963178	789624	6	976,106,29,159,158,72,	0,2272,5636,5713,6893,10058,
#Partially deleted in new
chr1	23010833	23014024	chr1:23010833-23014024	0	-	23010900	23014024	789624	2	367,142,	0,3049,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	23010833	23015850	chr1:23010833-23015850	3	-	23010900	23015773	789624	3	268,163,79,	0,3049,4938,
#Partially deleted in new
chr1	23010834	23014094	chr1:23010834-23014094	1	-	23010900	23014047	789624	2	267,212,	0,3048,
#Partially deleted in new
chr1	23019442	23083672	chr1:23019442-23083672	1	+	23019596	23083364	789624	19	505,166,134,79,93,107,82,95,143,91,135,74,130,133,188,115,128,147,494,	0,11026,30944,34318,35626,36489,38041,39630,49096,49618,51782,52681,53831,57785,59547,60110,62003,62777,63736,
#Partially deleted in new
chr1	23019447	23083689	chr1:23019447-23083689	3	+	23019596	23083364	0	19	500,166,134,79,93,107,82,95,143,91,135,74,112,133,188,115,128,147,511,	0,11021,30939,34313,35621,36484,38036,39625,49091,49613,51777,52676,53844,57780,59542,60105,61998,62772,63731,
#Partially deleted in new
chr1	23019492	23083688	chr1:23019492-23083688	1	+	23019596	23083364	0	21	455,166,60,134,79,93,107,82,95,12,143,91,135,74,112,133,188,115,128,147,510,	0,10976,24934,30894,34268,35576,36439,37991,39580,46567,49046,49568,51732,52631,53799,57735,59497,60060,61953,62727,63686,
#Partially deleted in new
chr1	23020146	23088058	chr1:23020146-23088058	3	-	23020146	23020146	8553170	2	405,261,	0,67651,
#Deleted in new
chr1	23044304	23044372	chr1:23044304-23044372	3	+	23044304	23044304	5263520	1	68,	0,
#Partially deleted in new
chr1	23050424	23055418	chr1:23050424-23055418	0	+	23050424	23050424	8553170	3	96,79,350,	0,3336,4644,
#Partially deleted in new
chr1	23077233	23083354	chr1:23077233-23083354	0	+	23077233	23083354	789624	6	127,212,115,128,147,176,	0,1732,2319,4212,4986,5945,
#Deleted in new
chr1	23080872	23083682	chr1:23080872-23083682	0	+	23080872	23080872	8553170	1	2810,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	23084022	23168858	chr1:23084022-23168858	1	-	23088894	23094261	789624	4	5031,3191,106,93,	0,7167,24999,84743,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	23084029	23177808	chr1:23084029-23177808	3	-	23088894	23094261	789624	5	5024,3191,106,259,318,	0,7160,24992,84736,93461,
#Partially deleted in new
chr1	23090426	23168817	chr1:23090426-23168817	1	-	23090889	23094261	789624	3	472,3191,52,	0,763,78339,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	23093442	23168845	chr1:23093442-23168845	0	-	23093442	23094261	789624	4	938,106,66,80,	0,15579,16142,75323,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	23094154	23133679	chr1:23094154-23133679	0	-	23094154	23094261	789624	4	226,106,66,215,	0,14867,15430,39310,
#Deleted in new
chr1	23140324	23141142	chr1:23140324-23141142	7	+	23140324	23140324	16724991	1	818,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	23162703	23162810	chr1:23162703-23162810	3	+	23162703	23162703	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	23163952	23164053	chr1:23163952-23164053	3	+	23163952	23163952	8553170	1	101,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	23191894	23194729	chr1:23191894-23194729	3	-	23193085	23194219	789624	1	2835,	0,
#Partially deleted in new
chr1	23244764	23245224	chr1:23244764-23245224	7	+	23244764	23244764	16724991	1	460,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	23281307	23286545	chr1:23281307-23286545	1	-	23281307	23281307	8553170	3	1806,490,1436,	0,2687,3802,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	23281308	23286752	chr1:23281308-23286752	3	-	23281308	23281308	789624	1	5444,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	23284355	23285454	chr1:23284355-23285454	1	-	23284355	23284355	8553170	2	55,345,	0,754,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	23297796	23302866	chr1:23297796-23302866	3	+	23297796	23297796	8553170	2	81,523,	0,4547,
#Partially deleted in new
chr1	23303770	23306632	chr1:23303770-23306632	0	-	23303770	23303770	8553170	2	336,221,	0,2641,
#Partially deleted in new
chr1	23303962	23313601	chr1:23303962-23313601	0	-	23306489	23313601	789624	5	144,92,239,122,49,	0,2449,6865,7238,9590,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	23304687	23344336	chr1:23304687-23344336	1	-	23310453	23337834	0	10	6379,122,150,215,136,177,114,108,119,126,	0,6513,8865,13795,16840,18868,28830,33066,33802,39523,
#Partially deleted in new
chr1	23309782	23344310	chr1:23309782-23344310	1	-	23310453	23341008	0	11	1284,122,150,215,136,177,114,108,119,166,100,	0,1418,3770,8700,11745,13773,23735,27971,28707,31069,34428,
#Deleted in new
chr1	23309783	23311893	chr1:23309783-23311893	0	-	23309783	23309783	8553170	3	1283,122,232,	0,1417,1878,
#Partially deleted in new
chr1	23309785	23344322	chr1:23309785-23344322	3	-	23310453	23341008	0	11	1281,122,150,206,136,177,114,108,119,169,112,	0,1415,3767,8697,11742,13770,23732,27968,28704,31066,34425,
#Partially deleted in new
chr1	23309787	23344262	chr1:23309787-23344262	1	-	23310453	23341008	0	11	1279,122,150,206,136,177,114,108,119,166,52,	0,1413,3765,8695,11740,13768,23730,27966,28702,31064,34423,
#Partially deleted in new
chr1	23310332	23344295	chr1:23310332-23344295	1	-	23310453	23337834	789624	9	734,122,150,206,136,177,108,119,85,	0,868,3220,8150,11195,13223,27421,28157,33878,
#Partially deleted in new
chr1	23310453	23341008	chr1:23310453-23341008	1	-	23310453	23341008	0	9	613,122,150,206,136,177,108,119,157,	0,747,3099,8029,11074,13102,27300,28036,30398,
#Partially deleted in new
chr1	23313552	23338549	chr1:23313552-23338549	0	-	23313552	23313552	8553170	6	150,206,136,177,108,60,	0,4930,7975,10003,24201,24937,
#Partially deleted in new
chr1	23313598	23333631	chr1:23313598-23333631	0	-	23313598	23313598	8553170	4	104,206,136,114,	0,4884,7929,19919,
#Partially deleted in new
chr1	23318482	23338135	chr1:23318482-23338135	0	-	23318482	23318482	8553170	6	206,136,177,114,108,73,	0,3045,5073,15035,19271,19580,
#Deleted in new
chr1	23338269	23344317	chr1:23338269-23344317	0	-	23338269	23338269	8553170	3	339,166,107,	0,2582,5941,
#Partially deleted in new
chr1	23359447	23369442	chr1:23359447-23369442	3	-	23361968	23368005	789624	4	3774,127,93,77,	0,7594,8525,9918,
#Partially deleted in new
chr1	23359974	23368386	chr1:23359974-23368386	1	-	23361968	23368005	789624	3	3247,127,414,	0,7067,7998,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	23368996	23371783	chr1:23368996-23371783	0	+	23368996	23368996	8553170	3	33,71,271,	0,2142,2516,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	23369217	23371839	chr1:23369217-23371839	3	+	23369217	23369217	8553170	2	296,701,	0,1921,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	23369235	23371782	chr1:23369235-23371782	1	+	23369235	23369235	789624	1	2547,	0,
#Partially deleted in new
chr1	23369237	23371512	chr1:23369237-23371512	1	+	23369237	23369237	8553170	2	87,374,	0,1901,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	23369249	23371783	chr1:23369249-23371783	1	+	23369249	23369249	789624	3	264,71,271,	0,1889,2263,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	23370253	23370346	chr1:23370253-23370346	3	+	23370253	23370253	8553170	1	93,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	23371143	23371783	chr1:23371143-23371783	1	+	23371143	23371143	8553170	2	66,310,	0,330,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	23378379	23379029	chr1:23378379-23379029	3	-	23378379	23378379	8553170	1	650,	0,
#Partially deleted in new
chr1	23381060	23424740	chr1:23381060-23424740	3	-	23381465	23424633	789624	11	414,72,147,155,57,164,63,142,106,63,176,	0,3285,6212,12818,16484,16731,27603,36188,36843,38016,43504,
#Partially deleted in new
chr1	23383432	23424618	chr1:23383432-23424618	0	-	23384050	23424618	789624	11	636,72,147,155,57,164,63,142,106,63,54,	0,913,3840,10446,14112,14359,25231,33816,34471,35644,41132,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	23403480	23424707	chr1:23403480-23424707	1	-	23404138	23424633	789624	6	680,63,142,106,63,143,	0,5183,13768,14423,15596,21084,
#Partially deleted in new
chr1	23404068	23419386	chr1:23404068-23419386	1	-	23404138	23419097	789624	5	92,63,142,106,310,	0,4595,13180,13835,15008,
#Partially deleted in new
chr1	23408559	23419236	chr1:23408559-23419236	0	-	23408559	23408559	8553170	4	167,142,106,160,	0,8689,9344,10517,
#Partially deleted in new
chr1	23410831	23412146	chr1:23410831-23412146	7	+	23410831	23410831	16724991	3	297,84,45,	0,631,1270,
#Deleted in new
chr1	23417344	23418298	chr1:23417344-23418298	0	-	23417344	23417344	8553170	2	46,395,	0,559,
#Partially deleted in new
chr1	23428562	23484178	chr1:23428562-23484178	3	-	23429855	23484133	0	25	1368,91,223,196,108,68,116,86,178,95,134,191,49,88,70,110,87,76,86,112,50,75,146,73,174,	0,2472,3133,4514,4862,5063,5691,5970,7288,7997,8348,8567,8861,10184,10598,12539,12824,13092,13623,13938,22916,24134,27318,27559,55442,
#Partially deleted in new
chr1	23428562	23436677	chr1:23428562-23436677	1	-	23429855	23436642	0	10	1368,91,223,196,108,68,116,86,178,118,	0,2472,3133,4514,4862,5063,5691,5970,7288,7997,
#Partially deleted in new
chr1	23428562	23484564	chr1:23428562-23484564	1	-	23431741	23484133	789624	10	1368,91,128,54,50,75,146,73,148,93,	0,2472,3133,13996,22916,24134,27318,27559,55442,55909,
#Partially deleted in new
chr1	23429531	23433532	chr1:23429531-23433532	0	-	23429855	23433532	789624	5	399,91,223,115,108,	0,1503,2164,3626,3893,
#Partially deleted in new
chr1	23429626	23484184	chr1:23429626-23484184	0	-	23456157	23484133	789624	25	304,91,223,196,171,68,116,86,178,95,134,191,49,88,70,110,87,76,86,112,50,75,146,73,149,	0,1408,2069,3450,3735,3999,4627,4906,6224,6933,7284,7503,7797,9120,9534,11475,11760,12028,12559,12874,21852,23070,26254,26495,54409,
#Partially deleted in new
chr1	23429721	23484179	chr1:23429721-23484179	1	-	23429855	23484133	0	24	209,91,223,196,108,68,116,86,178,95,134,191,49,88,70,110,87,76,86,135,75,146,73,175,	0,1313,1974,3355,3703,3904,4532,4811,6129,6838,7189,7408,7702,9025,9439,11380,11665,11933,12464,12779,22975,26159,26400,54283,
#Partially deleted in new
chr1	23433202	23436968	chr1:23433202-23436968	0	-	23435808	23436968	789624	8	70,108,68,116,86,306,95,58,	0,222,423,1051,1330,2520,3357,3708,
#Partially deleted in new
chr1	23436926	23442271	chr1:23436926-23442271	0	-	23438830	23442271	789624	8	118,191,49,88,110,87,76,86,	0,203,497,1820,4175,4460,4728,5259,
#Partially deleted in new
chr1	23436963	23439016	chr1:23436963-23439016	0	-	23436963	23436963	8553170	4	81,191,49,270,	0,166,460,1783,
#Partially deleted in new
chr1	23441349	23484192	chr1:23441349-23484192	0	-	23441349	23441349	8553170	9	124,65,86,112,50,75,146,73,157,	0,305,836,1151,10129,11347,14531,14772,42686,
#Partially deleted in new
chr1	23451478	23484568	chr1:23451478-23484568	0	-	23451478	23484133	789624	6	50,75,146,73,148,97,	0,1218,4402,4643,32526,32993,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	23455990	23480179	chr1:23455990-23480179	0	-	23455990	23455990	8553170	3	36,73,371,	0,131,23818,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	23506429	23531220	chr1:23506429-23531220	3	-	23509879	23530793	0	7	3719,193,115,159,220,106,679,	0,9905,12586,14483,15407,17953,24112,
#Partially deleted in new
chr1	23516358	23519396	chr1:23516358-23519396	0	-	23516358	23516358	8553170	2	169,381,	0,2657,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	23549138	23550915	chr1:23549138-23550915	3	-	23549138	23549138	8553170	2	305,151,	0,1626,
#Partially deleted in new
chr1	23557917	23559794	chr1:23557917-23559794	3	-	23558959	23559426	0	3	498,85,668,	0,1017,1209,
#Partially deleted in new
chr1	23557933	23559075	chr1:23557933-23559075	0	-	23557933	23557933	8553170	2	482,141,	0,1001,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	23558444	23559443	chr1:23558444-23559443	0	-	23558444	23558444	8553170	2	575,317,	0,682,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	23576435	23593621	chr1:23576435-23593621	3	-	23576435	23576435	8553170	4	898,93,144,187,	0,8790,8967,16999,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	23581494	23640568	chr1:23581494-23640568	3	+	23581494	23581494	8553170	7	184,331,802,91,77,116,180,	0,10987,45241,47012,47986,58185,58894,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	23627333	23640568	chr1:23627333-23640568	0	+	23627333	23627333	5263520	7	204,218,91,77,143,116,180,	0,447,1173,2147,11775,12346,13055,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	23639108	23640549	chr1:23639108-23640549	0	+	23639108	23639108	8553170	3	143,116,161,	0,571,1280,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	23670293	23680259	chr1:23670293-23680259	7	+	23670293	23670293	16724991	7	53,119,302,197,226,235,54,	0,401,617,5988,6224,7380,9912,
#Partially deleted in new
chr1	23691741	23696417	chr1:23691741-23696417	1	+	23691823	23696373	0	6	88,148,107,132,111,74,	0,870,2065,2918,4056,4602,
#Partially deleted in new
chr1	23691805	23696412	chr1:23691805-23696412	0	+	23691805	23691805	8553170	5	24,151,107,1249,69,	0,803,2001,2854,4538,
#Partially deleted in new
chr1	23691805	23696835	chr1:23691805-23696835	3	+	23691823	23696373	0	6	24,151,107,132,111,492,	0,803,2001,2854,3992,4538,
#Partially deleted in new
chr1	23691820	23696425	chr1:23691820-23696425	0	+	23691823	23691958	789624	6	240,151,107,132,111,82,	0,788,1986,2839,3977,4523,
#Partially deleted in new
chr1	23692305	23696418	chr1:23692305-23696418	1	+	23692635	23696373	789624	5	454,107,132,111,75,	0,1501,2354,3492,4038,
#Partially deleted in new
chr1	23692608	23695946	chr1:23692608-23695946	0	+	23692608	23692608	8553170	4	151,107,132,149,	0,1198,2051,3189,
#Partially deleted in new
chr1	23743154	23762059	chr1:23743154-23762059	3	+	23743425	23759573	0	11	424,57,107,1186,112,156,98,181,112,173,2548,	0,5866,6687,7690,9252,10945,11208,12688,13119,13798,16357,
#Partially deleted in new
chr1	23743365	23762040	chr1:23743365-23762040	1	+	23743425	23759573	0	11	213,57,107,1186,112,156,98,181,112,173,2529,	0,5655,6476,7479,9041,10734,10997,12477,12908,13587,16146,
#Partially deleted in new
chr1	23743471	23759893	chr1:23743471-23759893	1	+	23743503	23759573	789624	11	107,57,107,1186,112,156,98,181,112,173,382,	0,5549,6370,7373,8935,10628,10891,12371,12802,13481,16040,
#Partially deleted in new
chr1	23744033	23750944	chr1:23744033-23750944	0	+	23744033	23744033	8553170	4	237,57,107,100,	0,4987,5808,6811,
#Partially deleted in new
chr1	23760381	23778287	chr1:23760381-23778287	3	-	23760381	23760381	789624	4	770,56,159,89,	0,11729,11886,17817,
#Partially deleted in new
chr1	23771610	23772397	chr1:23771610-23772397	0	-	23771610	23771610	8553170	3	273,56,130,	0,500,657,
#Partially deleted in new
chr1	23778404	23788232	chr1:23778404-23788232	3	+	23778515	23787376	789624	6	309,44,78,105,109,958,	0,1033,1459,7270,7910,8870,
#Partially deleted in new
chr1	23779356	23786378	chr1:23779356-23786378	0	+	23779900	23786378	789624	3	585,105,64,	0,6318,6958,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	23785191	23788232	chr1:23785191-23788232	1	+	23785693	23787376	789624	4	120,105,109,958,	0,483,1123,2083,
#Deleted in new
chr1	23790969	23795539	chr1:23790969-23795539	3	+	23792682	23794732	0	10	281,104,32,66,48,71,74,102,174,858,	0,1687,2038,2181,2735,2890,3093,3254,3457,3712,
#Deleted in new
chr1	23791186	23794745	chr1:23791186-23794745	1	+	23792682	23794342	789624	7	64,104,32,66,48,71,522,	0,1470,1821,1964,2518,2673,3037,
#Deleted in new
chr1	23791186	23794511	chr1:23791186-23794511	0	+	23792719	23794511	789624	8	64,104,66,48,71,74,102,85,	0,1470,1964,2518,2673,2876,3037,3240,
#Deleted in new
chr1	23791202	23794955	chr1:23791202-23794955	1	+	23792682	23794710	789624	10	48,104,32,66,48,71,74,102,49,274,	0,1454,1805,1948,2502,2657,2860,3021,3349,3479,
#Deleted in new
chr1	23791202	23794875	chr1:23791202-23794875	0	+	23791202	23791202	8553170	9	48,104,32,66,48,74,102,174,194,	0,1454,1805,1948,2502,2860,3021,3224,3479,
#Deleted in new
chr1	23791220	23794870	chr1:23791220-23794870	1	+	23792682	23794397	789624	8	30,104,32,66,48,71,74,647,	0,1436,1787,1930,2484,2639,2842,3003,
#Deleted in new
chr1	23791970	23794712	chr1:23791970-23794712	0	+	23791970	23791970	8553170	9	47,104,66,48,71,74,102,174,31,	0,686,1180,1734,1889,2092,2253,2456,2711,
#Deleted in new
chr1	23791991	23793907	chr1:23791991-23793907	0	+	23792682	23793907	789624	6	26,209,32,66,48,48,	0,560,1016,1159,1713,1868,
#Deleted in new
chr1	23793652	23795277	chr1:23793652-23795277	1	+	23793729	23794732	789624	6	100,71,74,102,174,596,	0,207,410,571,774,1029,
#Deleted in new
chr1	23794091	23795081	chr1:23794091-23795081	0	+	23794091	23794091	8553170	3	45,377,400,	0,132,590,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	23795598	23800781	chr1:23795598-23800781	0	-	23795598	23795598	8553170	10	409,115,78,86,67,114,177,614,71,70,	0,552,910,1098,1277,1435,2096,2518,3767,5113,
#Partially deleted in new
chr1	23795598	23800804	chr1:23795598-23800804	3	-	23795948	23799007	0	12	409,115,78,86,67,114,177,114,116,126,71,93,	0,552,910,1098,1277,1435,2096,2518,3016,3288,3767,5113,
#Partially deleted in new
chr1	23795599	23800402	chr1:23795599-23800402	1	-	23795948	23799007	0	12	408,115,78,86,67,114,177,114,116,126,71,16,	0,551,909,1097,1276,1434,2095,2517,3015,3287,3766,4787,
#Deleted in new
chr1	23795603	23796942	chr1:23795603-23796942	0	-	23795948	23796942	789624	4	404,115,86,67,	0,547,1093,1272,
#Partially deleted in new
chr1	23795660	23800753	chr1:23795660-23800753	0	-	23795660	23795660	8553170	11	347,115,274,67,114,177,114,116,126,71,42,	0,490,848,1215,1373,2034,2456,2954,3226,3705,5051,
#Deleted in new
chr1	23796003	23797069	chr1:23796003-23797069	0	-	23796003	23796003	8553170	3	779,67,36,	0,872,1030,
#Partially deleted in new
chr1	23796150	23799533	chr1:23796150-23799533	0	-	23796150	23798659	789624	8	115,86,67,114,177,114,116,168,	0,546,725,883,1544,1966,2464,3215,
#Partially deleted in new
chr1	23796508	23800770	chr1:23796508-23800770	0	-	23796508	23798659	789624	9	78,86,67,114,177,114,116,71,59,	0,188,367,525,1186,1608,2106,2857,4203,
#Partially deleted in new
chr1	23797073	23799436	chr1:23797073-23799436	0	-	23797073	23797073	8553170	5	74,177,109,116,71,	0,621,1043,1541,2292,
#Partially deleted in new
chr1	23797091	23800523	chr1:23797091-23800523	0	-	23797091	23799007	789624	7	56,177,114,116,126,71,216,	0,603,1025,1523,1795,2274,3216,
#Partially deleted in new
chr1	23797093	23799570	chr1:23797093-23799570	0	-	23797093	23799007	789624	6	54,177,114,116,126,205,	0,601,1023,1521,1793,2272,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	23797695	23799436	chr1:23797695-23799436	0	-	23797695	23797695	8553170	4	176,614,126,71,	0,421,1191,1670,
#Partially deleted in new
chr1	23798119	23799113	chr1:23798119-23799113	0	-	23798119	23798119	8553170	3	106,116,227,	0,495,767,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	23798326	23800752	chr1:23798326-23800752	0	-	23798326	23798326	8553170	2	686,1387,	0,1039,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	23798379	23800761	chr1:23798379-23800761	0	-	23798379	23798379	8553170	4	351,126,71,50,	0,507,986,2332,
#Deleted in new
chr1	23798693	23800773	chr1:23798693-23800773	0	-	23798693	23798693	8553170	5	37,126,71,260,62,	0,193,672,1166,2018,
#Partially deleted in new
chr1	23801884	23825459	chr1:23801884-23825459	3	-	23802462	23825415	0	9	680,126,189,64,149,96,108,84,104,	0,2515,6250,8851,12305,14790,15591,18625,23471,
#Partially deleted in new
chr1	23801886	23825428	chr1:23801886-23825428	1	-	23802462	23825415	0	7	678,126,189,96,108,84,73,	0,2513,6248,14788,15589,18623,23469,
#Partially deleted in new
chr1	23801909	23825402	chr1:23801909-23825402	0	-	23802462	23825402	789624	5	655,126,189,84,47,	0,2490,6225,18600,23446,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	23803587	23825427	chr1:23803587-23825427	0	-	23803587	23803587	8553170	6	938,81,96,108,84,72,	0,4547,13087,13888,16922,21768,
#Partially deleted in new
chr1	23806699	23814321	chr1:23806699-23814321	0	-	23806699	23806699	8553170	5	341,132,189,64,132,	0,454,1435,4036,7490,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	23809286	23825416	chr1:23809286-23825416	0	-	23809286	23809286	8553170	6	1513,149,96,108,84,61,	0,4903,7388,8189,11223,16069,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	23813831	23816761	chr1:23813831-23816761	0	-	23813831	23813831	8553170	2	507,87,	0,2843,
#Partially deleted in new
chr1	23816365	23817533	chr1:23816365-23817533	0	-	23816365	23816365	8553170	2	405,58,	0,1110,
#Partially deleted in new
chr1	23845076	23868294	chr1:23845076-23868294	3	-	23845714	23868286	789624	8	779,100,191,201,106,138,135,397,	0,997,3572,9283,14721,18057,20414,22821,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	23870525	23913362	chr1:23870525-23913362	3	-	23874534	23875617	0	2	5137,117,	0,42720,
#Deleted in new
chr1	23901470	23902737	chr1:23901470-23902737	7	-	23901470	23901470	16724991	1	1267,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	23907110	23907885	chr1:23907110-23907885	3	+	23907110	23907110	8553170	2	71,139,	0,636,
#Deleted in new
chr1	23929069	23929147	chr1:23929069-23929147	3	+	23929069	23929069	5263520	1	78,	0,
#Deleted in new
chr1	23949015	23949383	chr1:23949015-23949383	7	-	23949015	23949015	16724991	1	368,	0,
#Partially deleted in new
chr1	23956838	23963446	chr1:23956838-23963446	3	+	23961457	23961877	789624	4	69,146,206,2007,	0,143,4090,4601,
#Deleted in new
chr1	23959108	23961465	chr1:23959108-23961465	0	+	23961457	23961465	8553170	3	148,206,26,	0,1820,2331,
#Deleted in new
chr1	23959811	23963462	chr1:23959811-23963462	1	+	23961457	23961877	0	3	187,206,2023,	0,1117,1628,
#Deleted in new
chr1	23959827	23961880	chr1:23959827-23961880	1	+	23961457	23961877	0	3	171,202,441,	0,1105,1612,
#Deleted in new
chr1	23960967	23961443	chr1:23960967-23961443	1	+	23960967	23961443	789624	2	167,4,	0,472,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	23964803	23980331	chr1:23964803-23980331	1	-	23967662	23980255	789624	6	2920,54,163,104,105,141,	0,6769,7046,10170,13909,15387,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	23966444	23980927	chr1:23966444-23980927	0	-	23966444	23966444	789624	7	1279,54,163,78,363,165,737,	0,5128,5405,8529,11466,12208,13746,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	23966444	23980296	chr1:23966444-23980296	1	-	23967662	23980255	789624	6	1279,51,163,104,105,106,	0,5128,5405,8529,12268,13746,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	23967172	23980356	chr1:23967172-23980356	1	-	23967662	23980255	789624	5	551,163,104,105,166,	0,4677,7801,11540,13018,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	23967300	23980331	chr1:23967300-23980331	0	-	23971954	23980255	789624	4	423,51,163,141,	0,4272,4549,12890,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	23967306	23980308	chr1:23967306-23980308	1	-	23967925	23980255	789624	6	650,54,163,104,105,118,	0,4266,4543,7667,11406,12884,
#Partially deleted in new
chr1	23967617	23980294	chr1:23967617-23980294	1	-	23967925	23980255	789624	6	339,51,163,104,105,104,	0,3955,4232,7356,11095,12573,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	23969082	23980327	chr1:23969082-23980327	1	-	23971141	23980255	789624	6	2357,51,163,104,105,137,	0,2490,2767,5891,9630,11108,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	23970363	23980319	chr1:23970363-23980319	3	-	23971141	23980255	789624	6	1076,54,163,104,105,129,	0,1209,1486,4610,8349,9827,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	23970378	23977652	chr1:23970378-23977652	0	-	23970378	23970378	8553170	4	1061,54,163,2679,	0,1194,1471,4595,
#Partially deleted in new
chr1	23970974	23977937	chr1:23970974-23977937	0	-	23970974	23970974	8553170	5	465,51,163,107,27,	0,598,875,3999,6936,
#Partially deleted in new
chr1	23971338	23980271	chr1:23971338-23980271	0	-	23978672	23980255	789624	5	674,107,363,165,81,	0,3635,6572,7314,8852,
#Partially deleted in new
chr1	23971368	23975052	chr1:23971368-23975052	0	-	23971368	23971368	8553170	3	258,163,79,	0,481,3605,
#Deleted in new
chr1	23977269	23978252	chr1:23977269-23978252	0	-	23977269	23977269	8553170	2	184,342,	0,641,
#Deleted in new
chr1	23977789	23980331	chr1:23977789-23980331	0	-	23977789	23977789	8553170	3	484,165,141,	0,863,2401,
#Deleted in new
chr1	23978154	23978946	chr1:23978154-23978946	0	-	23978154	23978154	8553170	2	119,294,	0,498,
#Partially deleted in new
chr1	24007880	24008519	chr1:24007880-24008519	7	-	24007880	24007880	16724991	2	85,243,	0,396,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	24040834	24086799	chr1:24040834-24086799	3	+	24040834	24040834	8553170	4	108,69,227,50,	0,1442,23212,45915,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	24056034	24066579	chr1:24056034-24066579	1	-	24057363	24066208	789624	10	1593,56,23,37,164,109,39,88,111,473,	0,2889,5025,5238,5911,7091,7457,8037,9856,10072,
#Boundary problem: need 37, got 0, diff 37, mapped 0.0
chr1	24056036	24112175	chr1:24056036-24112175	3	-	24057363	24108636	789624	37	1591,56,23,37,164,109,39,88,111,68,60,145,137,45,110,157,115,179,127,188,122,172,184,128,54,200,142,162,138,45,89,96,158,160,81,179,145,	0,2887,5023,5236,5909,7089,7455,8035,9854,10984,11933,12186,15080,15932,18123,19282,20122,23979,25293,25964,26556,28431,30607,33501,34028,34760,36137,36910,38816,39405,41886,43643,49883,51036,51956,52439,55994,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	24056095	24084132	chr1:24056095-24084132	0	-	24056095	24056095	8553170	2	231,187,	0,27850,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	24066773	24083565	chr1:24066773-24083565	3	+	24066773	24066773	8553170	3	69,101,291,	0,14976,16501,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	24081548	24108439	chr1:24081548-24108439	0	-	24081548	24081548	8553170	14	3091,184,128,54,200,142,162,138,45,89,96,158,160,447,	0,5095,7989,8516,9248,10625,11398,13304,13893,16374,18131,24371,25524,26444,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	24119770	24143121	chr1:24119770-24143121	3	-	24120804	24143082	0	7	1967,122,139,176,179,133,82,	0,3531,8370,14440,17360,18811,23269,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	24154156	24187261	chr1:24154156-24187261	3	-	24157129	24187248	0	7	3735,131,160,143,185,124,71,	0,4895,5317,7385,15260,26574,33034,
#Partially deleted in new
chr1	24157098	24187261	chr1:24157098-24187261	1	-	24157826	24187248	0	6	793,160,143,185,124,71,	0,2375,4443,12318,23632,30092,
#Partially deleted in new
chr1	24157129	24187248	chr1:24157129-24187248	1	-	24157129	24187248	0	7	675,131,160,143,185,124,58,	0,1922,2344,4412,12287,23601,30061,
#Partially deleted in new
chr1	24158999	24187959	chr1:24158999-24187959	1	-	24159045	24169534	789624	6	183,160,143,185,124,158,	0,474,2542,10417,21731,28802,
#Partially deleted in new
chr1	24161377	24187248	chr1:24161377-24187248	1	-	24161415	24187248	0	4	307,185,124,58,	0,8039,19353,25813,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	24200239	24211693	chr1:24200239-24211693	3	+	24200239	24200239	5263520	3	152,136,1561,	0,2224,9893,
#Partially deleted in new
chr1	24307555	24321901	chr1:24307555-24321901	3	-	24307555	24307555	8553170	5	225,138,143,114,236,	0,622,3119,4323,14110,
#Partially deleted in new
chr1	24319321	24355318	chr1:24319321-24355318	3	+	24319551	24354488	789624	16	247,187,62,346,74,154,112,95,159,79,134,35,89,86,65,945,	0,12104,15323,17160,17756,18314,18670,20346,22793,23372,23570,25575,27231,28146,30736,35052,
#Partially deleted in new
chr1	24319424	24364482	chr1:24319424-24364482	1	+	24319551	24364371	789624	16	144,187,62,346,74,154,112,95,159,79,134,35,89,86,65,298,	0,12001,15220,17057,17653,18211,18567,20243,22690,23269,23467,25472,27128,28043,30633,44760,
#Partially deleted in new
chr1	24319455	24336742	chr1:24319455-24336742	0	+	24319455	24319455	8553170	3	113,187,261,	0,11970,17026,
#Partially deleted in new
chr1	24319565	24355318	chr1:24319565-24355318	1	+	24331546	24354488	789624	16	182,187,62,346,74,154,112,95,159,79,134,35,89,86,65,945,	0,11860,15079,16916,17512,18070,18426,20102,22549,23128,23326,25331,26987,27902,30492,34808,
#Partially deleted in new
chr1	24319813	24336598	chr1:24319813-24336598	0	+	24331546	24336598	789624	4	128,187,62,117,	0,11612,14831,16668,
#Partially deleted in new
chr1	24323039	24354488	chr1:24323039-24354488	1	+	24323085	24354488	789624	16	78,187,62,346,74,154,112,95,159,79,134,35,89,86,65,115,	0,8386,11605,13442,14038,14596,14952,16628,19075,19654,19852,21857,23513,24428,27018,31334,
#Partially deleted in new
chr1	24323039	24354488	chr1:24323039-24354488	0	+	24323085	24336546	789624	15	78,62,346,74,154,112,95,159,79,134,35,89,86,65,115,	0,11605,13442,14038,14596,14952,16628,19075,19654,19852,21857,23513,24428,27018,31334,
#Partially deleted in new
chr1	24337497	24342195	chr1:24337497-24342195	0	+	24337497	24337497	8553170	3	292,112,81,	0,494,4617,
#Deleted in new
chr1	24342159	24343275	chr1:24342159-24343275	0	+	24342159	24342159	8553170	3	114,79,384,	0,534,732,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	24356998	24415097	chr1:24356998-24415097	1	-	24358542	24401388	789624	9	1621,191,166,109,171,102,119,138,187,	0,3852,12675,16703,22654,26903,34562,44320,57912,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	24356999	24413772	chr1:24356999-24413772	1	-	24358542	24401388	789624	9	1620,191,166,109,171,102,119,138,99,	0,3851,12674,16702,22653,26902,34561,44319,56674,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	24357004	24413725	chr1:24357004-24413725	3	-	24358542	24401366	789624	8	1615,191,166,109,171,102,138,52,	0,3846,12669,16697,22648,26897,44314,56669,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	24357004	24416934	chr1:24357004-24416934	0	-	24357004	24357004	8553170	10	1615,191,166,109,171,102,119,144,138,3261,	0,3846,12669,16697,22648,26897,34556,34919,44314,56669,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	24368703	24401331	chr1:24368703-24401331	0	-	24368703	24368703	8553170	6	1136,109,171,137,119,13,	0,4998,10949,15163,22857,32615,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	24369042	24379823	chr1:24369042-24379823	0	-	24369346	24379823	789624	4	365,166,109,171,	0,631,4659,10610,
#Partially deleted in new
chr1	24379272	24391679	chr1:24379272-24391679	0	-	24379610	24391679	789624	3	551,102,119,	0,4629,12288,
#Deleted in new
chr1	24391202	24392071	chr1:24391202-24392071	0	-	24391202	24391202	8553170	2	477,148,	0,721,
#Partially deleted in new
chr1	24391257	24416153	chr1:24391257-24416153	0	-	24391257	24391257	8553170	3	422,138,151,	0,10061,24745,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	24391561	24412027	chr1:24391561-24412027	0	-	24391561	24391561	8553170	4	118,138,115,387,	0,9757,19141,20079,
#Partially deleted in new
chr1	24401078	24410779	chr1:24401078-24410779	0	-	24401078	24401078	8553170	2	378,77,	0,9624,
#Deleted in new
chr1	24414910	24416595	chr1:24414910-24416595	0	-	24414910	24414910	8553170	2	188,119,	0,1566,
#Partially deleted in new
chr1	24415793	24469307	chr1:24415793-24469307	3	+	24419547	24469185	789624	12	111,350,69,172,60,146,97,136,89,64,95,322,	0,3497,24378,26261,29391,33687,37614,40344,43094,44687,48232,53192,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	24415802	24472976	chr1:24415802-24472976	1	+	24442138	24469185	789624	13	102,350,110,69,172,60,146,97,136,89,64,95,3991,	0,3488,17301,24369,26252,29382,33678,37605,40335,43085,44678,48223,53183,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	24415811	24420128	chr1:24415811-24420128	0	+	24415811	24415811	8553170	2	93,838,	0,3479,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	24415812	24454824	chr1:24415812-24454824	1	+	24419547	24454097	789624	8	92,350,69,172,60,146,97,771,	0,3478,24359,26242,29372,33668,37595,38241,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	24415813	24466310	chr1:24415813-24466310	1	+	24419547	24466089	789624	12	91,350,69,172,60,146,97,136,89,64,95,307,	0,3477,24358,26241,29371,33667,37594,40324,43074,44667,48212,50190,
#Partially deleted in new
chr1	24415857	24422110	chr1:24415857-24422110	0	+	24415857	24415857	8553170	3	47,350,297,	0,3433,5956,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	24456165	24466378	chr1:24456165-24466378	0	+	24456165	24464067	789624	5	108,100,89,64,2353,	0,1568,2722,4315,7860,
#Partially deleted in new
chr1	24502350	24537019	chr1:24502350-24537019	1	+	24514372	24535277	789624	5	113,254,174,172,1927,	0,11963,28867,30732,32742,
#Partially deleted in new
chr1	24502350	24537019	chr1:24502350-24537019	1	+	24533088	24535277	789624	4	113,174,172,1927,	0,28867,30732,32742,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	24502896	24541040	chr1:24502896-24541040	3	+	24514372	24535277	789624	5	254,254,174,172,5948,	0,11417,28321,30186,32196,
#Partially deleted in new
chr1	24502896	24537019	chr1:24502896-24537019	1	+	24514372	24535277	789624	4	221,254,172,1927,	0,11417,30186,32196,
#Partially deleted in new
chr1	24502896	24537019	chr1:24502896-24537019	1	+	24533088	24535277	789624	4	254,174,172,1927,	0,28321,30186,32196,
#Partially deleted in new
chr1	24507566	24535357	chr1:24507566-24535357	1	+	24514372	24535277	789624	5	162,254,174,142,265,	0,6747,23651,25546,27526,
#Partially deleted in new
chr1	24507593	24537019	chr1:24507593-24537019	1	+	24514372	24535277	789624	5	135,254,174,172,1927,	0,6720,23624,25489,27499,
#Partially deleted in new
chr1	24514319	24535337	chr1:24514319-24535337	1	+	24514372	24535245	789624	3	248,174,245,	0,16898,20773,
#Partially deleted in new
chr1	24514346	24535357	chr1:24514346-24535357	1	+	24514372	24535277	789624	3	221,172,265,	0,18736,20746,
#Partially deleted in new
chr1	24514372	24535279	chr1:24514372-24535279	1	+	24514372	24535245	789624	2	195,187,	0,20720,
#Partially deleted in new
chr1	24533113	24535861	chr1:24533113-24535861	0	+	24533113	24535277	789624	3	141,277,79,	0,1979,2669,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	24538801	24556024	chr1:24538801-24556024	3	-	24538801	24538801	789624	3	1075,161,209,	0,13086,17014,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	24556110	24609325	chr1:24556110-24609325	3	+	24595430	24605747	789624	4	59,89,85,3720,	0,39313,44829,49495,
#Deleted in new
chr1	24563626	24563974	chr1:24563626-24563974	7	+	24563626	24563626	16724991	1	348,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	24589463	24609328	chr1:24589463-24609328	0	+	24589463	24589463	8553170	4	161,94,85,3723,	0,5960,11476,16142,
#Partially deleted in new
chr1	24625410	24625513	chr1:24625410-24625513	3	-	24625410	24625410	8553170	1	103,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	24631715	24635877	chr1:24631715-24635877	0	+	24631715	24631715	8553170	3	62,81,234,	0,1303,3928,
#Partially deleted in new
chr1	24633065	24650032	chr1:24633065-24650032	0	+	24633065	24633065	8553170	5	34,90,123,171,62,	0,12918,13601,15793,16905,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	24641230	24649987	chr1:24641230-24649987	0	+	24646672	24649987	789624	5	162,90,123,171,17,	0,4753,5436,7628,8740,
#Partially deleted in new
chr1	24643011	24673267	chr1:24643011-24673267	3	+	24643326	24672286	0	17	336,90,123,171,116,204,195,120,275,81,87,145,111,465,196,210,1086,	0,2972,3655,5847,6959,8397,9422,9901,11843,17707,18298,19648,23803,26111,27108,28374,29170,
#Partially deleted in new
chr1	24643271	24647588	chr1:24643271-24647588	0	+	24643271	24643271	8553170	4	76,90,123,510,	0,2712,3395,3807,
#Partially deleted in new
chr1	24643274	24652514	chr1:24643274-24652514	0	+	24643274	24643274	8553170	7	73,90,123,171,116,114,81,	0,2709,3392,5584,6696,8224,9159,
#Partially deleted in new
chr1	24643287	24648887	chr1:24643287-24648887	0	+	24643326	24647084	789624	6	60,90,123,130,143,29,	0,2696,3379,3791,4736,5571,
#Partially deleted in new
chr1	24643292	24650086	chr1:24643292-24650086	0	+	24643292	24643292	8553170	4	55,90,2363,116,	0,2691,3374,6678,
#Partially deleted in new
chr1	24643298	24672626	chr1:24643298-24672626	1	+	24643326	24672286	789624	18	49,90,123,171,116,204,195,105,275,81,87,145,42,111,465,196,210,445,	0,2685,3368,5560,6672,8110,9135,9629,11556,17420,18011,19361,19884,23516,25824,26821,28087,28883,
#Partially deleted in new
chr1	24643304	24650086	chr1:24643304-24650086	0	+	24643304	24643304	8553170	6	43,90,123,130,171,116,	0,2679,3362,3774,5554,6666,
#Partially deleted in new
chr1	24643307	24671595	chr1:24643307-24671595	0	+	24643307	24643307	8553170	17	40,90,123,171,116,204,195,120,275,81,87,145,42,111,465,196,210,	0,2676,3359,5551,6663,8101,9126,9605,11547,17411,18002,19352,19875,23507,25815,26812,28078,
#Partially deleted in new
chr1	24643321	24673262	chr1:24643321-24673262	1	+	24643326	24671453	789624	19	26,90,123,171,116,204,187,7,118,275,81,87,145,111,465,154,40,210,1081,	0,2662,3345,5537,6649,8087,9112,9300,9593,11533,17397,17988,19338,23493,25801,26798,26954,28064,28860,
#Partially deleted in new
chr1	24643558	24669508	chr1:24643558-24669508	0	+	24646672	24669508	789624	15	174,90,123,171,116,204,195,120,269,81,87,145,42,111,386,	0,2425,3108,5300,6412,7850,8875,9354,11296,17160,17751,19101,19624,23256,25564,
#Partially deleted in new
chr1	24648533	24652509	chr1:24648533-24652509	0	+	24648533	24648533	8553170	4	496,116,114,76,	0,1437,2965,3900,
#Partially deleted in new
chr1	24648617	24651533	chr1:24648617-24651533	0	+	24648617	24648617	8553170	3	412,116,35,	0,1353,2881,
#Partially deleted in new
chr1	24649987	24652628	chr1:24649987-24652628	0	+	24649987	24649987	8553170	4	99,63,204,195,	0,577,1421,2446,
#Partially deleted in new
chr1	24651519	24655129	chr1:24651519-24655129	0	+	24651519	24651519	8553170	5	93,195,120,38,275,	0,914,1393,2786,3335,
#Partially deleted in new
chr1	24652496	24662804	chr1:24652496-24662804	0	+	24652496	24652496	8553170	6	132,120,269,81,87,145,	0,416,2358,8222,8813,10163,
#Partially deleted in new
chr1	24655010	24666845	chr1:24655010-24666845	0	+	24655010	24655010	8553170	6	113,81,84,145,42,31,	0,5708,6302,7649,8172,11804,
#Partially deleted in new
chr1	24655021	24663068	chr1:24655021-24663068	0	+	24655021	24655021	8553170	4	102,81,87,409,	0,5697,6288,7638,
#Partially deleted in new
chr1	24655053	24660975	chr1:24655053-24660975	0	+	24655053	24655053	8553170	2	76,257,	0,5665,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	24666554	24669264	chr1:24666554-24669264	0	+	24666554	24666554	8553170	2	371,142,	0,2568,
#Partially deleted in new
chr1	24669582	24671469	chr1:24669582-24671469	0	+	24669582	24669582	8553170	2	733,84,	0,1803,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	24704893	24717596	chr1:24704893-24717596	3	+	24704893	24704893	8553170	4	94,77,353,362,	0,176,9053,12341,
#Partially deleted in new
chr1	24745356	24844324	chr1:24745356-24844324	3	+	24745553	24840937	0	6	269,110,126,107,182,3552,	0,52385,68737,81653,94503,95416,
#Partially deleted in new
chr1	24745381	24844267	chr1:24745381-24844267	0	+	24745553	24840937	0	7	244,110,126,107,182,1815,139,	0,52360,68712,81628,94478,95391,98747,
#Partially deleted in new
chr1	24745381	24839907	chr1:24745381-24839907	0	+	24745381	24745381	8553170	6	244,37,110,126,107,48,	0,47795,52360,68712,81628,94478,
#Partially deleted in new
chr1	24745408	24797963	chr1:24745408-24797963	0	+	24745408	24745408	8553170	2	217,222,	0,52333,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	24777872	24777979	chr1:24777872-24777979	3	-	24777872	24777872	8553170	1	107,	0,
#Partially deleted in new
chr1	24899510	24965010	chr1:24899510-24965010	1	-	24902121	24964571	0	6	3156,159,105,157,266,497,	0,7748,19729,28063,30076,65003,
#Partially deleted in new
chr1	24899517	24929877	chr1:24899517-24929877	3	-	24902121	24929868	0	5	3149,159,105,157,291,	0,7741,19722,28056,30069,
#Partially deleted in new
chr1	24901028	24964984	chr1:24901028-24964984	1	-	24902121	24964571	0	7	1638,159,105,157,266,155,149,	0,6230,18211,26545,28558,63485,63807,
#Partially deleted in new
chr1	24902571	24928798	chr1:24902571-24928798	0	-	24902571	24902571	8553170	5	95,159,105,157,56,	0,4687,16668,25002,26171,
#Deleted in new
chr1	24919344	24919416	chr1:24919344-24919416	3	-	24919344	24919344	5263520	1	72,	0,
#Partially deleted in new
chr1	24929736	24965121	chr1:24929736-24965121	0	-	24929736	24929736	8553170	3	116,66,102,	0,34777,35283,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	24961344	24963097	chr1:24961344-24963097	3	+	24961344	24961344	8553170	3	502,195,123,	0,702,1630,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	24968422	24970865	chr1:24968422-24970865	3	-	24968422	24968422	8553170	1	2443,	0,
#Partially deleted in new
chr1	25023502	25023586	chr1:25023502-25023586	3	+	25023502	25023502	5263520	1	84,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	25041135	25047404	chr1:25041135-25047404	3	+	25041135	25041135	8553170	3	243,190,675,	0,2577,5594,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	25041135	25044225	chr1:25041135-25044225	0	+	25041135	25041135	8553170	2	243,513,	0,2577,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	25043706	25113119	chr1:25043706-25113119	3	-	25043706	25043706	8553170	3	130,119,241,	0,60146,69172,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	25110457	25113120	chr1:25110457-25113120	1	-	25110457	25110457	8553170	2	372,242,	0,2421,
#Partially deleted in new
chr1	25125052	25125454	chr1:25125052-25125454	7	-	25125052	25125052	16724991	1	402,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	25208138	25209437	chr1:25208138-25209437	3	+	25208138	25208138	8553170	2	84,904,	0,395,
#Partially deleted in new
chr1	25222678	25232493	chr1:25222678-25232493	3	-	25223265	25232467	0	7	753,99,91,118,126,108,50,	0,2323,4763,5439,6319,9425,9765,
#Partially deleted in new
chr1	25222964	25232486	chr1:25222964-25232486	1	-	25223265	25232467	0	6	467,99,91,118,108,43,	0,2037,4477,5153,9139,9479,
#Partially deleted in new
chr1	25229014	25232432	chr1:25229014-25232432	0	-	25229014	25229014	8553170	2	109,329,	0,3089,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	25230308	25232502	chr1:25230308-25232502	0	-	25230308	25230308	8553170	2	1903,59,	0,2135,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	25232585	25234775	chr1:25232585-25234775	3	+	25232585	25232585	8553170	1	2190,	0,
#Partially deleted in new
chr1	25239493	25240253	chr1:25239493-25240253	3	+	25239493	25239493	8553170	1	760,	0,
#Partially deleted in new
chr1	25242236	25247519	chr1:25242236-25247519	3	-	25242588	25246963	789624	5	469,84,152,586,211,	0,1313,2913,4207,5072,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	25242248	25247454	chr1:25242248-25247454	0	-	25242248	25242248	789624	4	457,1752,586,146,	0,1301,4195,5060,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	25242248	25244105	chr1:25242248-25244105	0	-	25242248	25242248	8553170	3	178,167,556,	0,290,1301,
#Partially deleted in new
chr1	25242254	25246640	chr1:25242254-25246640	0	-	25242588	25246640	789624	5	172,167,84,152,197,	0,284,1295,2895,4189,
#Partially deleted in new
chr1	25242254	25246535	chr1:25242254-25246535	0	-	25244489	25246535	789624	5	451,84,45,152,92,	0,1295,2199,2895,4189,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	25242254	25247457	chr1:25242254-25247457	0	-	25244215	25246963	789624	5	451,675,152,586,149,	0,1295,2895,4189,5054,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	25242255	25338165	chr1:25242255-25338165	0	-	25244489	25246963	789624	6	450,675,45,152,586,1126,	0,1294,2198,2894,4188,94784,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	25242277	25246627	chr1:25242277-25246627	0	-	25242277	25242277	8553170	4	428,84,1125,184,	0,1272,1899,4166,
#Partially deleted in new
chr1	25242290	25243654	chr1:25242290-25243654	0	-	25242290	25242290	8553170	3	123,167,105,	0,248,1259,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	25242362	25246016	chr1:25242362-25246016	0	-	25242362	25242362	8553170	6	51,167,84,45,152,26,	0,176,1187,2091,2787,3628,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	25244070	25245208	chr1:25244070-25245208	0	-	25244070	25244070	8553170	2	428,59,	0,1079,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	25244071	25247446	chr1:25244071-25247446	1	-	25245092	25246963	789624	3	1230,586,138,	0,2372,3237,
#Partially deleted in new
chr1	25244998	25247454	chr1:25244998-25247454	0	-	25244998	25244998	8553170	3	303,149,118,	0,1445,2338,
#Partially deleted in new
chr1	25246576	25267915	chr1:25246576-25267915	0	-	25246576	25246963	789624	2	453,176,	0,21163,
#Partially deleted in new
chr1	25246675	25338100	chr1:25246675-25338100	0	-	25246675	25246963	789624	2	354,123,	0,91302,
#Partially deleted in new
chr1	25246694	25338213	chr1:25246694-25338213	0	-	25246694	25246963	789624	2	335,145,	0,91374,
#Deleted in new
chr1	25247836	25248321	chr1:25247836-25248321	3	+	25247836	25247836	8553170	1	485,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	25253113	25267885	chr1:25253113-25267885	0	-	25253113	25253113	8553170	2	824,146,	0,14626,
#Deleted in new
chr1	25266101	25267136	chr1:25266101-25267136	7	-	25266101	25266101	16724991	2	33,426,	0,609,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	25272392	25330445	chr1:25272392-25330445	3	+	25272547	25328924	789624	10	303,187,151,148,167,138,134,80,74,1548,	0,12180,18248,28553,29127,30929,34203,44607,49496,56505,
#Partially deleted in new
chr1	25272392	25306942	chr1:25272392-25306942	0	+	25272392	25272392	8553170	7	303,187,151,148,167,138,347,	0,12180,18248,28553,29127,30929,34203,
#Partially deleted in new
chr1	25272438	25329161	chr1:25272438-25329161	1	+	25272547	25321907	8553170	9	257,187,151,148,167,138,80,74,264,	0,12134,18202,28507,29081,30883,44561,49450,56459,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	25272485	25330445	chr1:25272485-25330445	1	+	25272547	25317052	789624	11	210,187,151,148,167,138,134,170,80,74,1548,	0,12087,18155,28460,29034,30836,34110,35161,44514,49403,56412,
#Partially deleted in new
chr1	25272497	25329211	chr1:25272497-25329211	1	+	25272547	25328924	789624	7	198,187,151,148,167,138,314,	0,12075,18143,28448,29022,30824,56400,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	25272547	25329211	chr1:25272547-25329211	1	+	25272547	25329136	789624	9	148,187,151,148,167,138,134,170,314,	0,12025,18093,28398,28972,30774,34048,35099,56350,
#Partially deleted in new
chr1	25272547	25329211	chr1:25272547-25329211	1	+	25272547	25329015	789624	8	148,187,151,148,167,138,134,314,	0,12025,18093,28398,28972,30774,34048,56350,
#Partially deleted in new
chr1	25272547	25329211	chr1:25272547-25329211	1	+	25272547	25329015	789624	8	148,187,151,148,167,138,80,314,	0,12025,18093,28398,28972,30774,44452,56350,
#Partially deleted in new
chr1	25272547	25321900	chr1:25272547-25321900	0	+	25272547	25272547	8553170	7	148,187,151,148,167,138,12,	0,12025,18093,28398,28972,30774,49341,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	25272547	25329211	chr1:25272547-25329211	1	+	25272547	25317052	789624	10	148,187,151,148,167,138,134,170,80,314,	0,12025,18093,28398,28972,30774,34048,35099,44452,56350,
#Partially deleted in new
chr1	25272547	25329211	chr1:25272547-25329211	1	+	25272547	25329136	789624	9	148,187,151,148,167,138,134,80,314,	0,12025,18093,28398,28972,30774,34048,44452,56350,
#Partially deleted in new
chr1	25294163	25294643	chr1:25294163-25294643	7	-	25294163	25294163	16724991	1	480,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	25304386	25337233	chr1:25304386-25337233	0	-	25304386	25304386	8553170	2	435,194,	0,32653,
#Partially deleted in new
chr1	25304682	25337411	chr1:25304682-25337411	0	-	25304682	25304682	8553170	3	139,54,372,	0,2213,32357,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	25304795	25337401	chr1:25304795-25337401	0	-	25304795	25304795	8553170	3	26,209,362,	0,13267,32244,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	25335367	25338190	chr1:25335367-25338190	0	-	25335367	25335367	8553170	2	468,477,	0,2346,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	25335845	25337218	chr1:25335845-25337218	0	-	25335845	25335845	8553170	2	420,179,	0,1194,
#Deleted in new
chr1	25336428	25337465	chr1:25336428-25337465	7	-	25336428	25336428	16724991	2	33,426,	0,611,
#Partially deleted in new
chr1	25337916	25362361	chr1:25337916-25362361	3	+	25340486	25360705	789624	7	540,106,113,68,93,61,1702,	0,2557,5044,13709,14965,18876,22743,
#Partially deleted in new
chr1	25338316	25360967	chr1:25338316-25360967	0	+	25338316	25338316	8553170	6	140,106,68,93,61,308,	0,2157,13309,14565,18476,22343,
#Partially deleted in new
chr1	25338319	25361265	chr1:25338319-25361265	0	+	25338319	25338319	8553170	5	137,68,93,61,606,	0,13306,14562,18473,22340,
#Partially deleted in new
chr1	25338322	25361279	chr1:25338322-25361279	0	+	25338322	25338322	8553170	6	134,106,113,68,61,620,	0,2151,4638,13303,18470,22337,
#Partially deleted in new
chr1	25338459	25356853	chr1:25338459-25356853	0	+	25338459	25338459	8553170	6	358,106,113,68,93,61,	0,2014,4501,13166,14422,18333,
#Partially deleted in new
chr1	25342591	25351654	chr1:25342591-25351654	0	+	25342591	25342591	8553170	2	482,29,	0,9034,
#Partially deleted in new
chr1	25362248	25420914	chr1:25362248-25420914	3	-	25362526	25420786	789624	10	305,74,80,134,138,167,148,151,187,276,	0,8218,13100,23462,26727,28500,29745,40347,46434,58390,
#Partially deleted in new
chr1	25362307	25420795	chr1:25362307-25420795	1	-	25370494	25420786	789624	7	246,74,134,138,151,187,157,	0,8159,23403,26668,40288,46375,58331,
#Partially deleted in new
chr1	25362311	25430192	chr1:25362311-25430192	1	-	25362526	25411439	789624	12	242,74,80,134,138,167,148,151,187,139,97,253,	0,8155,13037,23399,26664,28437,29682,40284,46371,49028,66641,67628,
#Partially deleted in new
chr1	25362358	25402702	chr1:25362358-25402702	0	-	25370494	25402702	789624	4	195,74,80,107,	0,8108,12990,40237,
#Partially deleted in new
chr1	25362362	25420792	chr1:25362362-25420792	1	-	25362526	25420786	789624	7	191,74,80,134,151,187,154,	0,8104,12986,23348,40233,46320,58276,
#Partially deleted in new
chr1	25362430	25420805	chr1:25362430-25420805	1	-	25370494	25420786	789624	9	123,74,80,138,167,148,151,187,167,	0,8036,12918,26545,28318,29563,40165,46252,58208,
#Partially deleted in new
chr1	25362522	25420806	chr1:25362522-25420806	1	-	25370494	25420786	789624	9	31,74,134,138,167,148,151,187,168,	0,7944,23188,26453,28226,29471,40073,46160,58116,
#Partially deleted in new
chr1	25385497	25420941	chr1:25385497-25420941	0	-	25385497	25385497	8553170	7	347,138,167,148,151,187,303,	0,3478,5251,6496,17098,23185,35141,
#Partially deleted in new
chr1	25385710	25420796	chr1:25385710-25420796	0	-	25402726	25420786	789624	4	134,138,151,158,	0,3265,16885,34928,
#Partially deleted in new
chr1	25398720	25399198	chr1:25398720-25399198	7	+	25398720	25398720	16724991	1	478,	0,
#Partially deleted in new
chr1	25402595	25420848	chr1:25402595-25420848	0	-	25402595	25402595	8553170	4	151,187,44,210,	0,6087,17159,18043,
#Partially deleted in new
chr1	25430857	25500205	chr1:25430857-25500205	1	+	25431098	25498466	789624	9	321,142,127,124,159,183,121,175,1942,	0,15904,17950,23401,53258,54755,58315,60552,67406,
#Partially deleted in new
chr1	25430919	25500209	chr1:25430919-25500209	3	+	25431098	25498466	789624	11	259,142,127,124,179,502,159,183,121,175,1946,	0,15842,17888,23339,25733,27471,53196,54693,58253,60490,67344,
#Partially deleted in new
chr1	25430959	25499230	chr1:25430959-25499230	0	+	25431098	25484133	8553170	11	219,142,127,124,179,502,148,183,121,175,967,	0,15802,17848,23299,25693,27431,53167,54653,58213,60450,67304,
#Partially deleted in new
chr1	25448892	25458783	chr1:25448892-25458783	0	+	25448892	25448892	8553170	3	42,124,393,	0,5366,9498,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	25543579	25568886	chr1:25543579-25568886	3	+	25543698	25566992	0	9	207,143,113,115,73,84,131,35,2039,	0,10342,11280,13573,19064,19490,20081,21593,23268,
#Partially deleted in new
chr1	25549960	25554879	chr1:25549960-25554879	0	+	25549960	25549960	8553170	3	75,143,20,	0,3961,4899,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	25553363	25568884	chr1:25553363-25568884	0	+	25553363	25553363	8553170	7	701,113,115,73,84,1547,2037,	0,1496,3789,9280,9706,10297,13484,
#Partially deleted in new
chr1	25554880	25557429	chr1:25554880-25557429	0	+	25554880	25554880	8553170	2	92,277,	0,2272,
#Deleted in new
chr1	25562815	25567000	chr1:25562815-25567000	0	+	25562815	25562815	8553170	4	338,131,35,153,	0,845,2357,4032,
#Deleted in new
chr1	25563633	25567570	chr1:25563633-25567570	0	+	25563633	25563633	8553170	3	158,32,723,	0,1542,3214,
#Deleted in new
chr1	25564590	25567636	chr1:25564590-25567636	0	+	25564590	25564590	8553170	3	171,35,789,	0,582,2257,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	25581477	25590356	chr1:25581477-25590356	3	+	25581477	25581477	8553170	2	295,188,	0,8691,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	25617467	25786207	chr1:25617467-25786207	3	+	25617797	25783789	789624	12	870,97,116,81,95,118,94,116,220,173,116,2545,	0,68972,129200,131787,136016,141124,146406,154189,160637,163472,165117,166195,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	25617467	25786206	chr1:25617467-25786206	1	+	25686529	25782646	789624	14	870,97,116,81,95,122,2,94,116,220,164,10,116,2544,	0,68972,129200,131787,136016,141124,146170,146406,154189,160637,163472,163783,165117,166195,
#Partially deleted in new
chr1	25617849	25784450	chr1:25617849-25784450	1	+	25686439	25783789	789624	13	488,125,97,116,81,95,118,94,116,220,173,116,788,	0,36392,68590,128818,131405,135634,140742,146024,153807,160255,163090,164735,165813,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	25644543	25659111	chr1:25644543-25659111	3	-	25644543	25644543	8553170	2	1877,347,	0,14221,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	25686501	25761684	chr1:25686501-25761684	0	+	25686501	25686501	8553170	5	35,116,81,95,3093,	0,60166,62753,66982,72090,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	25709601	25784450	chr1:25709601-25784450	1	+	25746717	25783789	789624	11	544,116,81,95,118,94,116,220,173,116,788,	0,37066,39653,43882,48990,54272,62055,68503,71338,72983,74061,
#Partially deleted in new
chr1	25777588	25783976	chr1:25777588-25783976	0	+	25777588	25777588	8553170	5	70,220,173,116,314,	0,516,3351,4996,6074,
#Partially deleted in new
chr1	25780713	25784292	chr1:25780713-25784292	0	+	25780713	25780713	8553170	3	399,116,630,	0,1871,2949,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	25800175	25818219	chr1:25800175-25818219	1	+	25800230	25815718	789624	13	238,118,134,210,125,138,82,189,95,11,113,102,2672,	0,867,4966,8404,8850,9507,11278,11515,12511,13455,13705,13901,15372,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	25800175	25818224	chr1:25800175-25818224	3	+	25800230	25815718	789624	13	238,118,102,134,210,125,138,82,189,106,113,102,2677,	0,867,1840,4966,8404,8850,9507,11278,11515,12511,13705,13901,15372,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	25800192	25818221	chr1:25800192-25818221	1	+	25800230	25815718	789624	12	221,118,134,210,125,138,82,189,106,113,102,2674,	0,850,4949,8387,8833,9490,11261,11498,12494,13688,13884,15355,
#Partially deleted in new
chr1	25811469	25823308	chr1:25811469-25823308	0	+	25811469	25811469	8553170	3	66,189,313,	0,221,11526,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	25812685	25818219	chr1:25812685-25818219	1	+	25814148	25815718	789624	4	107,113,102,2672,	0,1195,1391,2862,
#Deleted in new
chr1	25812727	25815990	chr1:25812727-25815990	0	+	25812727	25812727	8553170	5	65,89,113,102,443,	0,847,1153,1349,2820,
#Partially deleted in new
chr1	25813972	25823744	chr1:25813972-25823744	3	+	25813972	25823027	789624	4	21,102,110,101,	0,104,9046,9671,
#Partially deleted in new
chr1	25816748	25819772	chr1:25816748-25819772	3	-	25816748	25816748	8553170	4	132,152,22,129,	0,813,1654,2895,
#Partially deleted in new
chr1	25816749	25819743	chr1:25816749-25819743	1	-	25816749	25816749	8553170	4	131,152,202,32,	0,812,1473,2962,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	25818490	25820797	chr1:25818490-25820797	1	-	25818490	25818490	8553170	1	2307,	0,
#Partially deleted in new
chr1	25818639	25829514	chr1:25818639-25829514	0	+	25823104	25829514	789624	6	213,110,105,110,212,6,	0,4379,5004,7662,7975,10869,
#Partially deleted in new
chr1	25819905	25832941	chr1:25819905-25832941	3	+	25823104	25832026	789624	7	124,110,105,110,212,322,1021,	0,3113,3738,6396,6709,9603,12015,
#Partially deleted in new
chr1	25819925	25826707	chr1:25819925-25826707	0	+	25826666	25826707	789624	6	104,110,200,105,110,93,	0,3093,3314,3718,6376,6689,
#Partially deleted in new
chr1	25819928	25832942	chr1:25819928-25832942	1	+	25823104	25829784	789624	7	101,110,105,110,212,213,1022,	0,3090,3715,6373,6686,9689,11992,
#Partially deleted in new
chr1	25819928	25826720	chr1:25819928-25826720	0	+	25823104	25826720	789624	5	101,133,105,110,106,	0,3067,3715,6373,6686,
#Partially deleted in new
chr1	25819938	25826826	chr1:25819938-25826826	0	+	25826666	25826826	789624	4	91,128,110,212,	0,3682,6363,6676,
#Partially deleted in new
chr1	25819939	25829829	chr1:25819939-25829829	0	+	25826666	25829829	789624	5	90,105,110,212,321,	0,3704,6362,6675,9569,
#Partially deleted in new
chr1	25819954	25823747	chr1:25819954-25823747	0	+	25819954	25819954	8553170	2	75,729,	0,3064,
#Partially deleted in new
chr1	25819977	25832334	chr1:25819977-25832334	0	+	25819977	25819977	8553170	4	52,105,322,414,	0,3666,9531,11943,
#Partially deleted in new
chr1	25819978	25829831	chr1:25819978-25829831	1	+	25823104	25829784	789624	6	51,110,105,110,212,145,	0,3040,3665,6323,6636,9708,
#Partially deleted in new
chr1	25819980	25829621	chr1:25819980-25829621	0	+	25823104	25823747	789624	7	49,110,94,105,110,212,113,	0,3038,3365,3663,6321,6634,9528,
#Partially deleted in new
chr1	25819985	25832211	chr1:25819985-25832211	1	+	25826666	25832026	789624	7	44,110,128,110,212,322,291,	0,3033,3635,6316,6629,9523,11935,
#Partially deleted in new
chr1	25820002	25832938	chr1:25820002-25832938	1	+	25823104	25832026	789624	7	27,110,105,110,212,286,1018,	0,3016,3641,6299,6612,9542,11918,
#Partially deleted in new
chr1	25820187	25826400	chr1:25820187-25826400	0	+	25823104	25823692	789624	5	162,110,86,105,99,	0,2831,3050,3456,6114,
#Partially deleted in new
chr1	25820192	25832938	chr1:25820192-25832938	1	+	25823104	25832026	789624	7	222,110,105,110,212,322,1018,	0,2826,3451,6109,6422,9316,11728,
#Partially deleted in new
chr1	25820192	25826707	chr1:25820192-25826707	0	+	25823104	25826707	789624	5	157,110,105,110,93,	0,2826,3451,6109,6422,
#Partially deleted in new
chr1	25820231	25829658	chr1:25820231-25829658	0	+	25823104	25823692	789624	7	428,110,86,105,110,212,150,	0,2787,3006,3412,6070,6383,9277,
#Partially deleted in new
chr1	25820442	25829569	chr1:25820442-25829569	0	+	25823104	25829569	789624	6	217,110,105,110,212,61,	0,2576,3201,5859,6172,9066,
#Partially deleted in new
chr1	25820761	25826806	chr1:25820761-25826806	0	+	25823104	25823692	789624	6	160,110,86,105,110,192,	0,2257,2476,2882,5540,5853,
#Partially deleted in new
chr1	25820827	25832938	chr1:25820827-25832938	1	+	25823104	25832026	789624	7	176,110,105,110,212,322,1018,	0,2191,2816,5474,5787,8681,11093,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	25821522	25832936	chr1:25821522-25832936	1	+	25823104	25829784	789624	6	1606,105,110,212,213,1016,	0,2121,4779,5092,8095,10398,
#Partially deleted in new
chr1	25822995	25829797	chr1:25822995-25829797	0	+	25822995	25822995	8553170	4	133,105,110,289,	0,648,3306,6513,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	25825631	25832934	chr1:25825631-25832934	0	+	25825631	25825631	8553170	3	1195,322,1014,	0,3877,6289,
#Partially deleted in new
chr1	25831912	25859458	chr1:25831912-25859458	1	-	25832087	25859357	789624	4	246,825,142,179,	0,3109,5500,27367,
#Deleted in new
chr1	25831912	25832134	chr1:25831912-25832134	3	-	25831912	25831912	8553170	1	222,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	25834005	25859412	chr1:25834005-25859412	3	-	25834992	25859357	789624	3	1841,142,133,	0,3407,25274,
#Partially deleted in new
chr1	25834005	25837547	chr1:25834005-25837547	0	-	25834005	25834005	8553170	2	326,135,	0,3407,
#Partially deleted in new
chr1	25859612	25863420	chr1:25859612-25863420	3	+	25859612	25859612	8553170	2	263,586,	0,3222,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	25861209	25871253	chr1:25861209-25871253	3	-	25862798	25863839	789624	2	2652,645,	0,9399,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	25877495	25877605	chr1:25877495-25877605	3	+	25877495	25877495	8553170	1	110,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	25884180	25892607	chr1:25884180-25892607	0	-	25884180	25884180	8553170	2	1689,94,	0,8333,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	25885439	25906466	chr1:25885439-25906466	1	-	25885722	25904676	789624	5	430,192,173,75,78,	0,16051,18201,19224,20949,
#Deleted in new
chr1	25887359	25887610	chr1:25887359-25887610	7	+	25887359	25887359	16724991	1	251,	0,
#Deleted in new
chr1	25888969	25889109	chr1:25888969-25889109	7	+	25888969	25888969	16724991	1	140,	0,
#Partially deleted in new
chr1	25900101	25906466	chr1:25900101-25906466	1	-	25901015	25904676	789624	5	986,192,173,75,78,	0,1389,3539,4562,6287,
#Partially deleted in new
chr1	25900117	25906153	chr1:25900117-25906153	1	-	25901015	25904676	789624	5	970,192,173,75,302,	0,1373,3523,4546,5734,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	25900567	25906417	chr1:25900567-25906417	0	-	25900567	25900567	8553170	4	520,2323,75,29,	0,923,4096,5821,
#Partially deleted in new
chr1	25900594	25906991	chr1:25900594-25906991	3	-	25901015	25904676	789624	5	493,192,173,75,204,	0,896,3046,4069,6193,
#Partially deleted in new
chr1	25900740	25905128	chr1:25900740-25905128	1	-	25901015	25904676	789624	5	347,192,173,75,80,	0,750,2900,3923,4308,
#Partially deleted in new
chr1	25901406	25903813	chr1:25901406-25903813	0	-	25901406	25901406	8553170	2	276,173,	0,2234,
#Partially deleted in new
chr1	25901611	25905489	chr1:25901611-25905489	0	-	25901611	25904676	789624	4	71,173,75,346,	0,2029,3052,3532,
#Deleted in new
chr1	25906361	25906454	chr1:25906361-25906454	3	-	25906361	25906361	5263520	1	93,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	25959766	25998157	chr1:25959766-25998157	3	-	25961988	25990816	789624	11	2317,155,171,92,114,142,69,97,154,137,133,	0,12791,14713,16915,22597,24179,24693,28464,29681,30960,38258,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	25960769	25998044	chr1:25960769-25998044	1	-	25961988	25990816	789624	11	1314,155,171,92,114,142,69,97,154,195,20,	0,11788,13710,15912,21594,23176,23690,27461,28678,29957,37255,
#Partially deleted in new
chr1	25982363	25998056	chr1:25982363-25998056	0	-	25982363	25982363	8553170	5	114,142,69,137,32,	0,1582,2096,8363,15661,
#Partially deleted in new
chr1	25982364	25998117	chr1:25982364-25998117	0	-	25982364	25982364	8553170	4	113,142,69,93,	0,1581,2095,15660,
#Partially deleted in new
chr1	25982403	25984109	chr1:25982403-25984109	0	-	25982403	25982403	8553170	2	74,164,	0,1542,
#Partially deleted in new
chr1	25983955	25997621	chr1:25983955-25997621	0	-	25983955	25990816	789624	6	147,69,97,154,137,174,	0,504,4275,5492,6771,13492,
#Partially deleted in new
chr1	25984001	25998055	chr1:25984001-25998055	0	-	25984001	25990816	789624	7	86,69,97,154,137,174,31,	0,458,4229,5446,6725,13446,14023,
#Deleted in new
chr1	26006005	26006130	chr1:26006005-26006130	3	+	26006005	26006005	8553170	1	125,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	26006215	26006299	chr1:26006215-26006299	3	+	26006215	26006215	8553170	1	84,	0,
#Partially deleted in new
chr1	26019883	26031547	chr1:26019883-26031547	0	+	26019883	26019883	8553170	6	61,94,108,120,133,88,	0,9309,9716,10592,11248,11576,
#Partially deleted in new
chr1	26021779	26036464	chr1:26021779-26036464	3	+	26022646	26035347	789624	11	1646,94,108,120,133,107,90,87,161,169,1300,	0,7413,7820,8696,9352,9680,10616,11449,11916,13056,13385,
#Partially deleted in new
chr1	26023188	26031555	chr1:26023188-26031555	0	+	26023188	26023188	8553170	4	237,94,120,424,	0,6004,7287,7943,
#Deleted in new
chr1	26032129	26035004	chr1:26032129-26035004	0	+	26032129	26032129	8553170	3	356,161,169,	0,1566,2706,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	26037251	26046113	chr1:26037251-26046113	1	-	26039159	26045896	789624	7	2054,135,106,160,154,221,267,	0,2525,4448,5297,6146,7745,8595,
#Partially deleted in new
chr1	26038021	26046133	chr1:26038021-26046133	3	-	26039159	26045896	789624	8	1284,135,106,160,154,147,221,287,	0,1755,3678,4527,5376,6276,6975,7825,
#Partially deleted in new
chr1	26043438	26045451	chr1:26043438-26045451	0	-	26043438	26043438	8553170	3	113,147,455,	0,859,1558,
#Partially deleted in new
chr1	26046664	26049099	chr1:26046664-26049099	3	+	26046664	26046664	8553170	2	485,456,	0,1979,
#Partially deleted in new
chr1	26051303	26067633	chr1:26051303-26067633	3	-	26051872	26067494	0	9	580,72,125,23,234,96,169,173,298,	0,2589,5899,6324,7086,8962,9862,14964,16032,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	26061243	26068436	chr1:26061243-26068436	0	-	26061243	26061243	8553170	3	91,173,1101,	0,5024,6092,
#Partially deleted in new
chr1	26111164	26125530	chr1:26111164-26125530	3	+	26114308	26122577	789624	3	256,302,3694,	0,3127,10672,
#Partially deleted in new
chr1	26111172	26122124	chr1:26111172-26122124	0	+	26114308	26122124	789624	3	248,302,288,	0,3119,10664,
#Partially deleted in new
chr1	26111836	26125543	chr1:26111836-26125543	1	+	26114308	26122577	789624	4	79,191,302,3707,	0,623,2455,10000,
#Partially deleted in new
chr1	26111848	26124033	chr1:26111848-26124033	1	+	26114308	26122577	789624	3	67,302,2197,	0,2443,9988,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	26159019	26163962	chr1:26159019-26163962	3	+	26161291	26162107	789624	2	107,2751,	0,2192,
#Partially deleted in new
chr1	26164160	26168581	chr1:26164160-26168581	3	-	26164160	26168499	789624	4	295,98,84,166,	0,1665,1874,4255,
#Partially deleted in new
chr1	26165707	26168581	chr1:26165707-26168581	1	-	26165734	26168499	789624	3	216,84,166,	0,327,2708,
#Deleted in new
chr1	26169515	26171821	chr1:26169515-26171821	3	-	26171188	26171661	789624	3	1083,180,205,	0,1640,2101,
#Deleted in new
chr1	26169870	26170873	chr1:26169870-26170873	3	+	26169983	26170716	0	3	313,63,299,	0,547,704,
#Deleted in new
chr1	26169941	26170873	chr1:26169941-26170873	1	+	26169983	26170688	789624	2	242,456,	0,476,
#Deleted in new
chr1	26169946	26171665	chr1:26169946-26171665	0	-	26171188	26171661	789624	4	404,61,180,49,	0,591,1209,1670,
#Deleted in new
chr1	26170179	26170813	chr1:26170179-26170813	0	-	26170179	26170179	8553170	2	171,276,	0,358,
#Deleted in new
chr1	26170193	26171373	chr1:26170193-26171373	0	-	26170193	26170193	8553170	2	405,218,	0,962,
#Deleted in new
chr1	26170324	26171821	chr1:26170324-26171821	1	-	26171188	26171661	789624	4	274,180,73,52,	0,831,1292,1445,
#Deleted in new
chr1	26170490	26171831	chr1:26170490-26171831	1	-	26171188	26171661	8553170	2	845,215,	0,1126,
#Partially deleted in new
chr1	26177402	26189886	chr1:26177402-26189886	3	+	26177547	26189548	0	21	197,158,182,85,42,105,60,69,102,71,74,107,28,173,74,72,74,62,100,182,608,	0,3050,3312,4454,4958,5077,5794,5943,6326,6668,6811,6998,7182,7611,9765,10008,10831,11039,11195,11369,11876,
#Partially deleted in new
chr1	26177483	26183795	chr1:26177483-26183795	0	+	26177547	26180715	789624	9	97,158,182,85,42,105,60,69,67,	0,2969,3231,4373,4877,4996,5713,5862,6245,
#Partially deleted in new
chr1	26177489	26183218	chr1:26177489-26183218	0	+	26177489	26177489	8553170	7	110,158,182,85,4,105,22,	0,2963,3225,4367,4909,4990,5707,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	26177502	26181083	chr1:26177502-26181083	0	+	26177502	26177502	8553170	3	97,158,369,	0,2950,3212,
#Partially deleted in new
chr1	26177508	26189884	chr1:26177508-26189884	1	+	26177547	26189548	0	21	91,158,182,85,42,105,60,90,102,71,74,107,28,173,74,72,74,62,100,182,606,	0,2944,3206,4348,4852,4971,5688,5837,6220,6562,6705,6892,7076,7505,9659,9902,10725,10933,11089,11263,11770,
#Partially deleted in new
chr1	26177511	26189882	chr1:26177511-26189882	0	+	26177547	26183356	789624	21	88,158,182,85,42,100,60,69,102,71,74,107,28,173,74,72,74,62,100,182,604,	0,2941,3203,4345,4849,4973,5685,5834,6217,6559,6702,6889,7073,7502,9656,9899,10722,10930,11086,11260,11767,
#Partially deleted in new
chr1	26177511	26185041	chr1:26177511-26185041	0	+	26177547	26184225	789624	13	88,158,182,85,42,105,60,69,102,146,107,28,28,	0,2941,3203,4345,4849,4968,5685,5834,6217,6630,6889,7073,7502,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	26180167	26189846	chr1:26180167-26189846	1	+	26183749	26189548	789624	20	443,182,85,42,105,60,69,102,71,74,107,28,173,74,72,74,62,100,182,568,	0,547,1689,2193,2312,3029,3178,3561,3903,4046,4233,4417,4846,7000,7243,8066,8274,8430,8604,9111,
#Deleted in new
chr1	26181586	26183256	chr1:26181586-26183256	0	+	26181586	26181586	8553170	4	355,42,105,60,	0,774,893,1610,
#Deleted in new
chr1	26182004	26184195	chr1:26182004-26184195	0	+	26182004	26182004	8553170	7	78,42,105,60,69,102,125,	0,356,475,1192,1341,1724,2066,
#Deleted in new
chr1	26182054	26184409	chr1:26182054-26184409	0	+	26182054	26182054	8553170	9	28,42,105,53,69,102,71,74,9,	0,306,425,1149,1291,1674,2016,2159,2346,
#Partially deleted in new
chr1	26183203	26188457	chr1:26183203-26188457	0	+	26183203	26184225	789624	11	53,69,102,74,107,28,173,74,72,74,16,	0,142,525,1010,1197,1381,1810,3964,4207,5030,5238,
#Partially deleted in new
chr1	26186914	26188301	chr1:26186914-26188301	0	+	26186914	26186914	8553170	3	327,72,68,	0,496,1319,
#Partially deleted in new
chr1	26187292	26188853	chr1:26187292-26188853	0	+	26187292	26187292	8553170	4	190,270,100,82,	0,941,1305,1479,
#Partially deleted in new
chr1	26190560	26201603	chr1:26190560-26201603	0	+	26190627	26201603	789624	9	280,144,102,98,121,134,175,212,250,	0,726,3226,7125,7396,7725,9323,10269,10793,
#Partially deleted in new
chr1	26190560	26202968	chr1:26190560-26202968	3	+	26190627	26202542	789624	10	280,144,102,98,121,134,175,212,166,480,	0,726,3226,7125,7396,7725,9323,10269,10793,11928,
#Partially deleted in new
chr1	26190627	26202968	chr1:26190627-26202968	0	+	26190627	26201045	789624	10	213,144,102,98,121,86,175,246,166,480,	0,659,3159,7058,7329,7706,9256,10202,10726,11861,
#Partially deleted in new
chr1	26209740	26227840	chr1:26209740-26227840	7	+	26209740	26209740	16724991	8	1170,206,158,225,171,100,31,47,	0,6293,12872,13636,15360,15863,16845,18053,
#Partially deleted in new
chr1	26216111	26225162	chr1:26216111-26225162	4	+	26216111	26216111	16724991	3	128,144,62,	0,6501,8989,
#Partially deleted in new
chr1	26216113	26225123	chr1:26216113-26225123	4	+	26216113	26216113	16724991	4	126,144,377,23,	0,6499,7263,8987,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	26218580	26220476	chr1:26218580-26220476	7	-	26218580	26218580	16724991	3	671,119,109,	0,825,1787,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	26225319	26229840	chr1:26225319-26229840	5	+	26225319	26225319	16724991	4	384,152,203,339,	0,2084,2474,4182,
#Partially deleted in new
chr1	26234199	26278796	chr1:26234199-26278796	1	+	26239783	26277293	0	14	111,77,153,695,134,118,186,153,155,94,51,108,226,1661,	0,5562,9966,20971,23397,23943,25417,34283,35260,36814,37821,40764,42335,42936,
#Partially deleted in new
chr1	26234199	26277687	chr1:26234199-26277687	1	+	26239783	26277293	0	13	111,77,695,134,118,186,153,155,94,51,108,226,555,	0,5562,20971,23397,23943,25417,34283,35260,36814,37821,40764,42335,42933,
#Partially deleted in new
chr1	26234201	26278808	chr1:26234201-26278808	3	+	26239783	26277293	0	14	109,77,153,695,134,118,186,153,155,94,51,108,226,1676,	0,5560,9964,20969,23395,23941,25415,34281,35258,36812,37819,40762,42333,42931,
#Deleted in new
chr1	26254577	26255350	chr1:26254577-26255350	0	+	26254577	26254577	8553170	2	255,180,	0,593,
#Partially deleted in new
chr1	26257672	26278807	chr1:26257672-26278807	0	+	26257672	26277293	789624	10	58,118,186,153,155,94,51,108,226,1672,	0,470,1944,10810,11787,13341,14348,17291,18862,19463,
#Deleted in new
chr1	26263040	26263398	chr1:26263040-26263398	7	-	26263040	26263040	16724991	1	358,	0,
#Deleted in new
chr1	26271027	26272393	chr1:26271027-26272393	0	+	26271027	26271027	8553170	2	80,373,	0,993,
#Partially deleted in new
chr1	26271464	26276760	chr1:26271464-26276760	0	+	26271464	26271464	8553170	3	607,108,226,	0,3499,5070,
#Deleted in new
chr1	26279175	26281522	chr1:26279175-26281522	3	+	26280155	26281123	0	3	1028,168,465,	0,1589,1882,
#Deleted in new
chr1	26280121	26281450	chr1:26280121-26281450	1	+	26280155	26280983	789624	2	82,686,	0,643,
#Partially deleted in new
chr1	26281327	26306636	chr1:26281327-26306636	1	-	26282298	26302883	789624	11	1242,141,74,104,121,78,215,99,29,106,45,	0,1321,1536,2814,3034,4136,4495,19598,20366,21485,25264,
#Partially deleted in new
chr1	26282280	26306640	chr1:26282280-26306640	0	-	26282280	26282280	8553170	14	289,141,74,104,1180,215,127,77,55,101,99,29,106,49,	0,368,583,1861,2081,3542,11924,14638,15146,15681,18645,19413,20532,24311,
#Partially deleted in new
chr1	26282281	26306620	chr1:26282281-26306620	1	-	26282298	26285867	789624	12	288,141,74,104,121,78,215,77,55,101,29,29,	0,367,582,1860,2080,3182,3541,14637,15145,15680,19412,24310,
#Partially deleted in new
chr1	26282281	26306636	chr1:26282281-26306636	0	-	26282281	26282281	8553170	13	288,141,74,104,1180,215,127,77,55,101,29,106,45,	0,367,582,1860,2080,3541,11923,14637,15145,15680,19412,20531,24310,
#Partially deleted in new
chr1	26282283	26306632	chr1:26282283-26306632	1	-	26282298	26302883	789624	14	286,141,74,104,121,78,215,127,77,55,101,29,106,41,	0,365,580,1858,2078,3180,3539,11921,14635,15143,15678,19410,20529,24308,
#Partially deleted in new
chr1	26282283	26318265	chr1:26282283-26318265	1	-	26282298	26302883	789624	15	286,141,74,104,121,78,215,127,77,55,101,29,106,113,219,	0,365,580,1858,2078,3180,3539,11921,14635,15143,15678,19410,20529,24308,35763,
#Partially deleted in new
chr1	26282283	26306645	chr1:26282283-26306645	1	-	26282298	26302883	789624	16	286,141,74,104,121,78,215,127,77,55,101,99,29,106,125,54,	0,365,580,1858,2078,3180,3539,11921,14635,15143,15678,18642,19410,20529,20759,24308,
#Partially deleted in new
chr1	26282283	26318363	chr1:26282283-26318363	3	-	26282298	26302883	789624	16	286,141,74,104,121,78,215,127,77,55,101,99,29,106,113,317,	0,365,580,1858,2078,3180,3539,11921,14635,15143,15678,18642,19410,20529,24308,35763,
#Partially deleted in new
chr1	26282283	26306633	chr1:26282283-26306633	0	-	26282283	26282283	8553170	10	286,141,74,104,1180,215,127,55,101,42,	0,365,580,1858,2078,3539,11921,15143,15678,24308,
#Partially deleted in new
chr1	26282304	26298026	chr1:26282304-26298026	0	-	26282304	26282304	8553170	10	265,141,74,140,1180,215,127,77,55,65,	0,344,559,1837,2057,3518,11900,14614,15122,15657,
#Partially deleted in new
chr1	26285459	26306609	chr1:26285459-26306609	0	-	26285459	26301010	789624	10	82,215,127,77,55,101,128,29,106,18,	0,363,8745,11459,11967,12502,15466,16234,17353,21132,
#Partially deleted in new
chr1	26285875	26303167	chr1:26285875-26303167	0	-	26285875	26302883	789624	8	162,127,77,55,101,29,106,125,	0,8329,11043,11551,12086,15818,16937,17167,
#Partially deleted in new
chr1	26285942	26303016	chr1:26285942-26303016	0	-	26285942	26302883	789624	7	95,127,77,55,101,29,204,	0,8262,10976,11484,12019,15751,16870,
#Partially deleted in new
chr1	26294191	26306989	chr1:26294191-26306989	0	-	26294191	26298036	789624	7	140,77,55,101,29,113,134,	0,2727,3235,3770,7502,12400,12664,
#Partially deleted in new
chr1	26294204	26306636	chr1:26294204-26306636	0	-	26294204	26301010	789624	9	127,77,55,101,128,29,106,125,45,	0,2714,3222,3757,6721,7489,8608,8838,12387,
#Partially deleted in new
chr1	26296946	26306576	chr1:26296946-26306576	0	-	26296946	26302883	789624	7	49,55,101,99,29,106,289,	0,480,1015,3979,4747,5866,9341,
#Partially deleted in new
chr1	26317956	26320523	chr1:26317956-26320523	3	+	26318017	26320302	789624	2	115,353,	0,2214,
#Partially deleted in new
chr1	26317957	26320324	chr1:26317957-26320324	0	+	26317957	26317957	8553170	3	114,113,154,	0,570,2213,
#Deleted in new
chr1	26317957	26318994	chr1:26317957-26318994	0	+	26317957	26317957	8553170	2	114,467,	0,570,
#Partially deleted in new
chr1	26321697	26360080	chr1:26321697-26360080	3	-	26321967	26360049	789624	22	359,160,159,124,140,130,113,33,127,140,127,137,36,127,140,130,113,48,2968,740,64,144,	0,466,2454,6511,7036,9791,14397,14640,14908,15143,15555,15840,16314,16653,17592,21056,21349,21548,22047,32348,34761,38239,
#Partially deleted in new
chr1	26321858	26354130	chr1:26321858-26354130	1	-	26321967	26346657	789624	20	198,160,159,124,140,130,113,33,127,140,127,137,36,127,140,130,113,48,2968,95,	0,305,2293,6350,6875,9630,14236,14479,14747,14982,15394,15679,16153,16492,17431,20895,21188,21387,21886,32177,
#Partially deleted in new
chr1	26321876	26324981	chr1:26321876-26324981	0	-	26321876	26321876	8553170	4	180,160,159,192,	0,287,2275,2913,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	26321962	26325120	chr1:26321962-26325120	0	-	26321962	26321962	8553170	4	94,160,159,56,	0,201,2189,3102,
#Partially deleted in new
chr1	26324210	26354130	chr1:26324210-26354130	0	-	26324210	26346657	789624	18	100,124,140,130,113,33,127,140,127,137,36,127,140,130,113,48,2968,95,	0,3998,4523,7278,11884,12127,12395,12630,13042,13327,13801,14140,15079,18543,18836,19035,19534,29825,
#Partially deleted in new
chr1	26326687	26327033	chr1:26326687-26327033	7	+	26326687	26326687	16724991	1	346,	0,
#Partially deleted in new
chr1	26328608	26336383	chr1:26328608-26336383	0	-	26328608	26328608	8553170	4	265,130,113,46,	0,2880,7486,7729,
#Partially deleted in new
chr1	26331584	26337246	chr1:26331584-26337246	0	-	26331584	26331584	8553170	6	34,113,33,127,140,100,	0,4510,4753,5021,5256,5562,
#Partially deleted in new
chr1	26331593	26339346	chr1:26331593-26339346	0	-	26331593	26339346	789624	9	25,113,33,127,140,127,137,127,57,	0,4501,4744,5012,5247,5659,5944,6757,7696,
#Deleted in new
chr1	26336465	26338439	chr1:26336465-26338439	0	-	26336465	26336465	8553170	6	267,140,127,137,36,89,	0,375,787,1072,1546,1885,
#Partially deleted in new
chr1	26342753	26354096	chr1:26342753-26354096	0	-	26343094	26346657	789624	7	130,113,46,779,124,100,61,	0,293,492,991,2601,3859,11282,
#Partially deleted in new
chr1	26346458	26360052	chr1:26346458-26360052	0	-	26346458	26346458	8553170	3	254,64,116,	0,10000,13478,
#Partially deleted in new
chr1	26361633	26372735	chr1:26361633-26372735	1	-	26361650	26368571	789624	7	389,60,129,695,205,125,67,	0,482,1392,2898,5959,6824,11035,
#Partially deleted in new
chr1	26361634	26372775	chr1:26361634-26372775	1	-	26361650	26368571	789624	7	388,60,129,695,205,128,107,	0,481,1391,2897,5958,6823,11034,
#Partially deleted in new
chr1	26361636	26372735	chr1:26361636-26372735	3	-	26361650	26368571	789624	6	386,129,695,205,128,67,	0,1389,2895,5956,6821,11032,
#Partially deleted in new
chr1	26364721	26374522	chr1:26364721-26374522	0	-	26364721	26374290	789624	4	505,205,125,245,	0,2871,3736,9556,
#Partially deleted in new
chr1	26364736	26370745	chr1:26364736-26370745	0	-	26364736	26368571	789624	4	490,205,128,113,	0,2856,3721,5896,
#Partially deleted in new
chr1	26364932	26370750	chr1:26364932-26370750	0	-	26364932	26368571	789624	4	294,55,125,118,	0,2660,3525,5700,
#Partially deleted in new
chr1	26364973	26372744	chr1:26364973-26372744	0	-	26364973	26368571	789624	3	253,128,281,	0,3484,7490,
#Partially deleted in new
chr1	26364978	26372700	chr1:26364978-26372700	0	-	26364978	26372547	789624	4	248,205,125,166,	0,2614,3479,7556,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	26410777	26429722	chr1:26410777-26429722	3	+	26410891	26426458	0	4	145,197,185,3481,	0,608,14525,15464,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	26410816	26429719	chr1:26410816-26429719	1	+	26410891	26426458	0	5	106,197,185,2346,624,	0,569,14486,15425,18279,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	26432281	26471294	chr1:26432281-26471294	0	+	26432945	26442749	789624	9	95,118,117,166,117,102,115,108,2400,	0,609,5886,10426,14034,15277,25509,27755,36613,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	26432315	26448565	chr1:26432315-26448565	1	+	26432945	26448410	789624	7	61,118,117,143,117,102,210,	0,575,5852,10415,14000,15243,16040,
#Deleted in new
chr1	26432322	26433133	chr1:26432322-26433133	0	+	26432322	26432322	8553170	2	54,243,	0,568,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	26432328	26443080	chr1:26432328-26443080	0	+	26432328	26432328	8553170	4	48,118,117,373,	0,562,5839,10379,
#Partially deleted in new
chr1	26432338	26469439	chr1:26432338-26469439	1	+	26432945	26469131	789624	9	38,118,117,143,117,102,115,108,545,	0,552,5829,10392,13977,15220,25452,27698,36556,
#Partially deleted in new
chr1	26432338	26469373	chr1:26432338-26469373	1	+	26432945	26469131	789624	8	38,118,117,143,117,115,108,479,	0,552,5829,10392,13977,25452,27698,36556,
#Partially deleted in new
chr1	26432339	26469226	chr1:26432339-26469226	1	+	26432945	26469131	789624	8	37,118,117,143,102,115,108,332,	0,551,5828,10391,15219,25451,27697,36555,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	26432341	26448176	chr1:26432341-26448176	1	+	26432945	26447748	789624	6	35,118,117,143,117,618,	0,549,5826,10389,13974,15217,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	26432344	26438734	chr1:26432344-26438734	0	+	26432344	26432344	8553170	3	32,118,567,	0,546,5823,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	26432354	26471294	chr1:26432354-26471294	3	+	26432945	26469131	789624	9	22,118,117,143,117,102,115,108,2403,	0,536,5813,10376,13961,15204,25436,27682,36537,
#Partially deleted in new
chr1	26432365	26447615	chr1:26432365-26447615	0	+	26432945	26447615	789624	6	30,118,117,143,117,57,	0,525,5802,10365,13950,15193,
#Partially deleted in new
chr1	26432366	26446384	chr1:26432366-26446384	0	+	26432945	26446384	789624	5	49,118,117,143,69,	0,524,5801,10364,13949,
#Partially deleted in new
chr1	26432367	26446359	chr1:26432367-26446359	0	+	26432945	26446359	789624	5	151,118,117,143,44,	0,523,5800,10363,13948,
#Partially deleted in new
chr1	26432370	26442763	chr1:26432370-26442763	0	+	26432945	26442763	789624	4	224,118,117,33,	0,520,5797,10360,
#Partially deleted in new
chr1	26432370	26442805	chr1:26432370-26442805	0	+	26432945	26442805	789624	4	271,118,117,75,	0,520,5797,10360,
#Partially deleted in new
chr1	26432370	26442889	chr1:26432370-26442889	0	+	26432370	26432370	8553170	4	122,118,117,159,	0,520,5797,10360,
#Partially deleted in new
chr1	26432385	26446432	chr1:26432385-26446432	0	+	26432385	26432385	8553170	5	30,118,117,166,117,	0,505,5782,10322,13930,
#Partially deleted in new
chr1	26432389	26447639	chr1:26432389-26447639	0	+	26432945	26447639	789624	6	129,118,117,143,117,81,	0,501,5778,10341,13926,15169,
#Partially deleted in new
chr1	26432397	26446382	chr1:26432397-26446382	0	+	26432397	26432397	8553170	5	121,118,117,166,67,	0,493,5770,10310,13918,
#Partially deleted in new
chr1	26432402	26438284	chr1:26432402-26438284	0	+	26432945	26438284	789624	3	321,118,117,	0,488,5765,
#Partially deleted in new
chr1	26432725	26442889	chr1:26432725-26442889	0	+	26432725	26432725	8553170	3	283,117,159,	0,5442,10005,
#Partially deleted in new
chr1	26432777	26446396	chr1:26432777-26446396	0	+	26432777	26432777	8553170	4	231,117,166,81,	0,5390,9930,13538,
#Partially deleted in new
chr1	26432890	26460144	chr1:26432890-26460144	0	+	26432945	26460144	789624	6	118,117,143,102,115,108,	0,5277,9840,14668,24900,27146,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	26442835	26471294	chr1:26442835-26471294	0	+	26442835	26469131	789624	4	38,117,115,2403,	0,3480,14955,26056,
#Partially deleted in new
chr1	26446363	26467527	chr1:26446363-26467527	0	+	26446363	26467385	789624	5	69,102,115,108,235,	0,1195,11427,13673,20929,
#Deleted in new
chr1	26454652	26455187	chr1:26454652-26455187	7	-	26454652	26454652	16724991	1	535,	0,
#Partially deleted in new
chr1	26462755	26467282	chr1:26462755-26467282	3	-	26462755	26462755	789624	4	115,58,121,235,	0,620,3448,4292,
#Deleted in new
chr1	26472449	26474128	chr1:26472449-26474128	0	+	26472449	26472449	8553170	4	178,68,30,44,	0,1010,1253,1635,
#Deleted in new
chr1	26472462	26475228	chr1:26472462-26475228	0	+	26472462	26472462	8553170	4	165,653,96,116,	0,1020,2109,2650,
#Deleted in new
chr1	26472476	26475432	chr1:26472476-26475432	0	+	26472476	26472476	8553170	5	151,45,433,96,320,	0,1006,1226,2095,2636,
#Deleted in new
chr1	26472505	26475158	chr1:26472505-26475158	0	+	26472505	26472505	8553170	5	122,250,51,96,46,	0,977,1579,2066,2607,
#Deleted in new
chr1	26472510	26475568	chr1:26472510-26475568	0	+	26472510	26472510	8553170	6	117,103,30,51,96,456,	0,972,1192,1574,2061,2602,
#Deleted in new
chr1	26472514	26475970	chr1:26472514-26475970	3	+	26472612	26475148	789624	7	48,20,45,30,51,96,858,	0,93,968,1188,1570,2057,2598,
#Deleted in new
chr1	26472516	26475626	chr1:26472516-26475626	0	+	26472516	26472516	8553170	6	111,45,115,51,96,514,	0,966,1186,1568,2055,2596,
#Deleted in new
chr1	26472518	26475972	chr1:26472518-26475972	1	+	26472612	26475148	789624	6	109,45,30,51,96,860,	0,964,1184,1566,2053,2594,
#Deleted in new
chr1	26473205	26475565	chr1:26473205-26475565	0	+	26473205	26473205	8553170	5	322,30,51,96,453,	0,497,879,1366,1907,
#Deleted in new
chr1	26473428	26475360	chr1:26473428-26475360	0	+	26473428	26473428	8553170	2	707,789,	0,1143,
#Deleted in new
chr1	26519353	26520250	chr1:26519353-26520250	7	-	26519353	26519353	16724991	1	897,	0,
#Partially deleted in new
chr1	26529760	26546983	chr1:26529760-26546983	0	+	26529920	26530852	789624	4	223,158,45,117,	0,984,7164,17106,
#Partially deleted in new
chr1	26529760	26553461	chr1:26529760-26553461	0	+	26529920	26551447	789624	5	223,45,81,80,71,	0,7164,21636,21883,23630,
#Partially deleted in new
chr1	26529766	26575025	chr1:26529766-26575025	3	+	26529920	26574201	0	22	217,45,117,82,81,80,107,38,143,71,89,65,103,131,126,90,159,162,77,118,138,947,	0,7158,17100,17422,21630,21877,23624,24447,24829,25384,25770,26887,27231,29040,30959,31278,31738,41682,42082,42409,43457,44312,
#Partially deleted in new
chr1	26529774	26551503	chr1:26529774-26551503	0	+	26529774	26529774	8553170	5	209,45,117,82,107,	0,7150,17092,17414,21622,
#Partially deleted in new
chr1	26529777	26575014	chr1:26529777-26575014	1	+	26529920	26574201	789624	22	206,45,117,82,81,80,107,38,143,38,89,65,103,131,126,90,159,162,77,118,138,936,	0,7147,17089,17411,21619,21866,23613,24436,24818,25406,25759,26876,27220,29029,30948,31267,31727,41671,42071,42398,43446,44301,
#Partially deleted in new
chr1	26531217	26574431	chr1:26531217-26574431	1	+	26547239	26574201	0	22	221,45,117,82,81,80,107,38,143,71,89,65,103,131,126,90,159,162,77,118,138,353,	0,5707,15649,15971,20179,20426,22173,22996,23378,23933,24319,25436,25780,27589,29508,29827,30287,40231,40631,40958,42006,42861,
#Partially deleted in new
chr1	26531327	26554251	chr1:26531327-26554251	0	+	26547239	26554251	789624	7	111,45,82,81,80,107,38,	0,5597,15861,20069,20316,22063,22886,
#Partially deleted in new
chr1	26543111	26575014	chr1:26543111-26575014	1	+	26543161	26574201	0	21	110,117,82,81,80,107,38,143,71,89,65,103,131,126,90,159,162,77,118,138,936,	0,3755,4077,8285,8532,10279,11102,11484,12039,12425,13542,13886,15695,17614,17933,18393,28337,28737,29064,30112,30967,
#Partially deleted in new
chr1	26543129	26553426	chr1:26543129-26553426	0	+	26543161	26547243	789624	7	92,104,117,82,81,80,36,	0,945,3737,4059,8267,8514,10261,
#Partially deleted in new
chr1	26543161	26572233	chr1:26543161-26572233	0	+	26543161	26543161	8553170	18	60,117,82,81,80,107,38,143,71,89,65,103,131,126,90,159,162,385,	0,3705,4027,8235,8482,10229,11052,11434,11989,12375,13492,13836,15645,17564,17883,18343,28287,28687,
#Partially deleted in new
chr1	26545841	26575030	chr1:26545841-26575030	0	+	26545900	26553431	789624	22	194,117,82,81,80,79,107,38,143,71,89,65,103,131,126,90,159,162,77,118,138,952,	0,1025,1347,5555,5802,6976,7549,8372,8754,9309,9695,10812,11156,12965,14884,15203,15663,25607,26007,26334,27382,28237,
#Partially deleted in new
chr1	26545844	26551586	chr1:26545844-26551586	0	+	26545844	26545844	8553170	4	191,117,82,190,	0,1022,1344,5552,
#Partially deleted in new
chr1	26545851	26574276	chr1:26545851-26574276	1	+	26545900	26574201	0	21	184,117,82,81,80,107,38,143,71,89,65,103,131,126,90,159,162,77,118,138,198,	0,1015,1337,5545,5792,7539,8362,8744,9299,9685,10802,11146,12955,14874,15193,15653,25597,25997,26324,27372,28227,
#Partially deleted in new
chr1	26546899	26547590	chr1:26546899-26547590	0	+	26546899	26546899	8553170	2	84,402,	0,289,
#Partially deleted in new
chr1	26547242	26554447	chr1:26547242-26554447	0	+	26547242	26547242	8553170	5	28,81,80,107,234,	0,4154,4401,6148,6971,
#Partially deleted in new
chr1	26551445	26554135	chr1:26551445-26554135	0	+	26551445	26551445	8553170	3	32,80,745,	0,198,1945,
#Partially deleted in new
chr1	26554541	26554593	chr1:26554541-26554593	3	+	26554541	26554541	5263520	1	52,	0,
#Partially deleted in new
chr1	26555198	26557036	chr1:26555198-26557036	0	+	26555198	26555198	8553170	5	23,89,88,65,39,	0,338,877,1455,1799,
#Partially deleted in new
chr1	26557042	26571508	chr1:26557042-26571508	0	+	26557042	26571508	789624	5	58,131,90,159,60,	0,1764,4002,4462,14406,
#Partially deleted in new
chr1	26571228	26572021	chr1:26571228-26572021	0	+	26571228	26571228	8553170	2	382,173,	0,620,
#Partially deleted in new
chr1	26572269	26574734	chr1:26572269-26574734	0	+	26572269	26574443	789624	4	24,138,119,358,	0,954,1809,2107,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	26593242	26593546	chr1:26593242-26593546	3	-	26593242	26593242	8553170	1	304,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	26593939	26594041	chr1:26593939-26594041	3	-	26593939	26593939	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	26602368	26602432	chr1:26602368-26602432	3	-	26602368	26602368	8553170	1	64,	0,
#Partially deleted in new
chr1	26640376	26640614	chr1:26640376-26640614	7	-	26640376	26640376	16724991	1	238,	0,
#Deleted in new
chr1	26642285	26642389	chr1:26642285-26642389	3	-	26642285	26642285	8553170	1	104,	0,
#Deleted in new
chr1	26647446	26647681	chr1:26647446-26647681	7	+	26647446	26647446	16724991	1	235,	0,
#Deleted in new
chr1	26692131	26694131	chr1:26692131-26694131	3	-	26692131	26692131	789624	1	2000,	0,
#Partially deleted in new
chr1	26693235	26781177	chr1:26693235-26781177	1	+	26729662	26780756	789624	20	382,213,453,117,241,90,168,313,146,110,210,208,133,173,151,138,97,892,131,2155,	0,36415,37916,39440,67620,68148,68916,69737,72985,73221,74554,77883,79264,79579,80110,80344,80566,81093,82341,85787,
#Partially deleted in new
chr1	26696031	26731568	chr1:26696031-26731568	0	+	26729662	26731568	789624	3	69,213,417,	0,33619,35120,
#Partially deleted in new
chr1	26696032	26782110	chr1:26696032-26782110	3	+	26696403	26780756	0	20	1508,213,453,117,241,90,168,313,146,110,210,208,133,176,151,138,97,892,131,3088,	0,33618,35119,36643,64823,65351,66119,66940,70188,70424,71757,75086,76467,76779,77313,77547,77769,78296,79544,82990,
#Partially deleted in new
chr1	26696403	26780817	chr1:26696403-26780817	1	+	26696403	26780756	0	20	1137,213,453,117,241,90,168,313,146,110,210,208,133,176,151,138,97,241,131,1795,	0,33247,34748,36272,64452,64980,65748,66569,69817,70053,71386,74715,76096,76408,76942,77176,77398,78576,79173,82619,
#Deleted in new
chr1	26727707	26731318	chr1:26727707-26731318	0	+	26729662	26731318	789624	3	166,213,167,	0,1943,3444,
#Partially deleted in new
chr1	26728911	26780756	chr1:26728911-26780756	1	+	26729662	26780756	0	19	952,453,117,241,90,168,313,146,110,210,208,133,176,151,138,97,892,131,1734,	0,2240,3764,31944,32472,33240,34061,37309,37545,38878,42207,43588,43900,44434,44668,44890,45417,46665,50111,
#Partially deleted in new
chr1	26729379	26774901	chr1:26729379-26774901	1	+	26729662	26774806	789624	20	484,453,117,241,90,168,203,30,77,146,110,210,208,133,176,151,138,97,441,131,	0,1772,3296,31476,32004,32772,33593,33798,33829,36841,37077,38410,41739,43120,43432,43966,44200,44422,44949,45391,
#Partially deleted in new
chr1	26729656	26782102	chr1:26729656-26782102	0	+	26729656	26780756	789624	19	207,453,117,241,90,168,313,146,110,210,208,133,173,151,138,97,892,131,3080,	0,1495,3019,31199,31727,32495,33316,36564,36800,38133,41462,42843,43158,43689,43923,44145,44672,45920,49366,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	26752951	26765080	chr1:26752951-26765080	0	+	26752951	26752951	8553170	6	290,241,90,168,313,286,	0,7904,8432,9200,10021,11843,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	26764264	26765878	chr1:26764264-26765878	0	+	26764264	26764264	8553170	2	831,493,	0,1121,
#Partially deleted in new
chr1	26766269	26771191	chr1:26766269-26771191	0	+	26766269	26766269	8553170	3	297,210,73,	0,1520,4849,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	26769173	26772623	chr1:26769173-26772623	0	+	26769173	26769173	8553170	1	3450,	0,
#Partially deleted in new
chr1	26772962	26774962	chr1:26772962-26774962	0	+	26772962	26772962	8553170	4	25,372,97,634,	0,383,839,1366,
#Partially deleted in new
chr1	26772963	26781180	chr1:26772963-26781180	0	+	26772963	26775600	789624	6	24,151,138,97,131,2158,	0,382,616,838,2613,6059,
#Partially deleted in new
chr1	26772966	26774901	chr1:26772966-26774901	0	+	26772966	26772966	8553170	6	21,151,138,97,88,573,	0,379,613,835,1149,1362,
#Partially deleted in new
chr1	26774869	26780983	chr1:26774869-26780983	0	+	26774869	26775900	789624	4	351,131,140,1961,	0,707,947,4153,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	26778098	26781144	chr1:26778098-26781144	0	+	26778098	26778098	8553170	1	3046,	0,
#Partially deleted in new
chr1	26787471	26794250	chr1:26787471-26794250	0	+	26790815	26794250	789624	3	335,135,138,	0,3287,6641,
#Partially deleted in new
chr1	26787963	26797807	chr1:26787963-26797807	0	+	26790815	26794855	789624	5	26,135,94,432,245,	0,2795,6149,6839,9599,
#Partially deleted in new
chr1	26787994	26798398	chr1:26787994-26798398	3	+	26790815	26797844	789624	4	274,135,1122,836,	0,2764,6118,9568,
#Partially deleted in new
chr1	26788097	26794396	chr1:26788097-26794396	0	+	26790815	26794396	789624	3	297,135,284,	0,2661,6015,
#Partially deleted in new
chr1	26788194	26798393	chr1:26788194-26798393	1	+	26790815	26797844	789624	4	625,135,1122,831,	0,2564,5918,9368,
#Partially deleted in new
chr1	26788927	26794581	chr1:26788927-26794581	0	+	26790815	26794581	789624	3	103,135,469,	0,1831,5185,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	26814821	26815112	chr1:26814821-26815112	3	+	26814821	26814821	8553170	1	291,	0,
#Partially deleted in new
chr1	26826709	26857601	chr1:26826709-26857601	3	+	26826804	26853843	789624	8	430,161,150,138,49,103,113,3876,	0,5737,21898,23591,23848,24419,26043,27016,
#Partially deleted in new
chr1	26832003	26853963	chr1:26832003-26853963	0	+	26832516	26853843	789624	8	50,161,150,138,49,103,113,238,	0,443,16604,18297,18554,19125,20749,21722,
#Partially deleted in new
chr1	26832019	26851174	chr1:26832019-26851174	0	+	26832516	26851174	789624	6	53,161,150,138,49,46,	0,427,16588,18281,18538,19109,
#Deleted in new
chr1	26850361	26857602	chr1:26850361-26857602	0	+	26850361	26856226	789624	7	77,49,103,113,100,78,755,	0,196,767,2391,3364,5823,6486,
#Deleted in new
chr1	26851128	26853211	chr1:26851128-26853211	0	+	26851128	26851128	8553170	2	103,459,	0,1624,
#Deleted in new
chr1	26863137	26864457	chr1:26863137-26864457	3	+	26863212	26863959	0	1	1320,	0,
#Duplicated in new
chr1	26876132	26890297	chr1:26876132-26890297	3	-	26879676	26890096	789624	5	3617,131,161,157,612,	0,8027,9840,12836,13553,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	26876132	26878245	chr1:26876132-26878245	3	+	26876132	26876132	8553170	2	178,128,	0,1985,
#Partially deleted in new
chr1	26879500	26886341	chr1:26879500-26886341	0	-	26879500	26879500	8553170	3	249,131,369,	0,4659,6472,
#Partially deleted in new
chr1	26884232	26890260	chr1:26884232-26890260	0	-	26888985	26890096	789624	5	58,161,157,47,316,	0,1740,4736,5453,5712,
#Partially deleted in new
chr1	26886041	26888940	chr1:26886041-26888940	0	-	26886041	26886041	8553170	2	92,44,	0,2855,
#Partially deleted in new
chr1	26890487	26893448	chr1:26890487-26893448	0	-	26890803	26893448	789624	3	364,122,60,	0,2182,2901,
#Partially deleted in new
chr1	26890488	26900466	chr1:26890488-26900466	3	-	26891009	26900442	789624	7	738,128,122,60,175,425,475,	0,1922,2181,2900,3747,6812,9503,
#Partially deleted in new
chr1	26891056	26892892	chr1:26891056-26892892	0	-	26891056	26892756	789624	3	170,128,223,	0,1354,1613,
#Partially deleted in new
chr1	26911488	26913966	chr1:26911488-26913966	3	-	26911844	26913940	0	2	598,558,	0,1920,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	26921725	26946862	chr1:26921725-26946862	3	+	26921848	26946181	0	9	204,78,204,66,117,195,84,119,733,	0,2363,19731,20027,20934,21145,23664,23842,24404,
#Partially deleted in new
chr1	26922141	26942776	chr1:26922141-26942776	0	+	26924154	26942776	789624	5	351,78,204,66,117,	0,1947,19315,19611,20518,
#Partially deleted in new
chr1	26945134	26946184	chr1:26945134-26946184	0	+	26945134	26945134	8553170	2	552,55,	0,995,
#Partially deleted in new
chr1	26949561	26960406	chr1:26949561-26960406	3	-	26950068	26952380	789624	4	590,75,1071,57,	0,1120,1780,10788,
#Partially deleted in new
chr1	26949564	26960385	chr1:26949564-26960385	1	-	26951638	26952380	789624	5	587,75,700,253,36,	0,1117,1777,2595,10785,
#Partially deleted in new
chr1	26980164	26980975	chr1:26980164-26980975	7	+	26980164	26980164	16724991	2	350,147,	0,664,
#Deleted in new
chr1	26983627	26984024	chr1:26983627-26984024	7	+	26983627	26983627	16724991	1	397,	0,
#Deleted in new
chr1	26985896	26986340	chr1:26985896-26986340	7	-	26985896	26985896	16724991	1	444,	0,
#Partially deleted in new
chr1	26993706	27000898	chr1:26993706-27000898	3	+	26993786	26994470	789624	2	906,1052,	0,6140,
#Partially deleted in new
chr1	26994318	27000109	chr1:26994318-27000109	0	+	26994318	26994470	789624	2	312,263,	0,5528,
#Partially deleted in new
chr1	27005019	27012836	chr1:27005019-27012836	3	-	27005943	27012670	789624	2	1938,430,	0,7387,
#Partially deleted in new
chr1	27098814	27154910	chr1:27098814-27154910	3	-	27100306	27154334	0	12	1830,73,102,115,174,71,90,203,218,251,461,928,	0,2388,2910,3201,3570,3858,4408,7070,8833,10712,15011,55168,
#Deleted in new
chr1	27098814	27104022	chr1:27098814-27104022	0	-	27098814	27098814	8553170	7	1830,73,102,115,174,71,800,	0,2388,2910,3201,3570,3858,4408,
#Deleted in new
chr1	27098815	27099682	chr1:27098815-27099682	0	-	27098815	27098815	8553170	2	189,471,	0,396,
#Deleted in new
chr1	27100344	27102795	chr1:27100344-27102795	0	-	27100344	27100344	8553170	6	300,73,102,115,174,123,	0,858,1380,1671,2040,2328,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	27105450	27154598	chr1:27105450-27154598	1	-	27105701	27154334	0	5	637,218,251,461,616,	0,2197,4076,8375,48532,
#Partially deleted in new
chr1	27114232	27166981	chr1:27114232-27166981	0	-	27114232	27154334	789624	4	54,379,51,211,	0,39750,41121,52538,
#Partially deleted in new
chr1	27176750	27177277	chr1:27176750-27177277	7	+	27176750	27176750	16724991	1	527,	0,
#Partially deleted in new
chr1	27200833	27201473	chr1:27200833-27201473	7	-	27200833	27200833	16724991	1	640,	0,
#Deleted in new
chr1	27206929	27207796	chr1:27206929-27207796	7	+	27206929	27206929	16724991	1	867,	0,
#Deleted in new
chr1	27211264	27211484	chr1:27211264-27211484	7	+	27211264	27211264	16724991	1	220,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	27229105	27234352	chr1:27229105-27234352	3	-	27229105	27229105	8553170	3	130,158,91,	0,4339,5156,
#Partially deleted in new
chr1	27234515	27308633	chr1:27234515-27308633	1	+	27261054	27306383	0	16	436,147,84,47,112,188,183,95,116,76,109,174,236,175,193,2448,	0,26440,28636,47723,48822,53158,57699,59506,59998,61810,62532,63422,66710,69105,70485,71670,
#Partially deleted in new
chr1	27234667	27308244	chr1:27234667-27308244	3	+	27261054	27306383	0	16	284,147,84,47,112,188,183,95,116,76,106,174,236,175,193,2059,	0,26288,28484,47571,48670,53006,57547,59354,59846,61658,62383,63270,66558,68953,70333,71518,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	27255463	27255567	chr1:27255463-27255567	3	-	27255463	27255463	8553170	1	104,	0,
#Partially deleted in new
chr1	27261047	27308241	chr1:27261047-27308241	0	+	27261054	27306255	0	16	55,84,47,112,188,183,95,116,76,109,174,236,175,135,1258,72,	0,2104,21191,22290,26626,31167,32974,33466,35278,36000,36890,40178,42573,44011,45138,47122,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	27287708	27308619	chr1:27287708-27308619	0	+	27287708	27287708	8553170	10	153,183,95,116,76,109,174,236,1573,2434,	0,4506,6313,6805,8617,9339,10229,13517,15912,18477,
#Deleted in new
chr1	27305013	27306890	chr1:27305013-27306890	0	+	27305013	27306383	789624	3	180,265,183,	0,1172,1694,
#Partially deleted in new
chr1	27311239	27311838	chr1:27311239-27311838	7	+	27311239	27311239	16724991	2	106,176,	0,423,
#Partially deleted in new
chr1	27322144	27336399	chr1:27322144-27336399	3	+	27322197	27335466	789624	6	247,85,32,97,131,1021,	0,8575,9925,11813,12006,13234,
#Partially deleted in new
chr1	27322159	27336400	chr1:27322159-27336400	1	+	27322197	27335466	789624	6	232,85,32,97,131,1022,	0,8560,9910,11798,11991,13219,
#Partially deleted in new
chr1	27322246	27336400	chr1:27322246-27336400	0	+	27322296	27331023	789624	7	145,85,153,32,97,131,1022,	0,8473,8738,9823,11711,11904,13132,
#Partially deleted in new
chr1	27322247	27336400	chr1:27322247-27336400	1	+	27322296	27335466	789624	6	144,85,32,97,131,1022,	0,8472,9822,11710,11903,13131,
#Partially deleted in new
chr1	27322253	27332559	chr1:27322253-27332559	1	+	27322296	27332477	789624	4	138,85,32,113,	0,8466,9816,10193,
#Partially deleted in new
chr1	27322253	27335648	chr1:27322253-27335648	0	+	27322296	27331023	789624	8	138,85,153,32,97,131,88,270,	0,8466,8731,9816,11704,11897,12413,13125,
#Partially deleted in new
chr1	27322280	27334896	chr1:27322280-27334896	1	+	27322296	27334285	789624	5	111,85,32,97,746,	0,8439,9789,11677,11870,
#Partially deleted in new
chr1	27322284	27335824	chr1:27322284-27335824	0	+	27322296	27334691	789624	7	107,85,32,97,131,88,446,	0,8435,9785,11673,11866,12382,13094,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	27322299	27335545	chr1:27322299-27335545	0	+	27322299	27335466	789624	7	92,85,32,75,97,131,167,	0,8420,9770,11061,11658,11851,13079,
#Deleted in new
chr1	27325328	27325796	chr1:27325328-27325796	7	+	27325328	27325328	16724991	1	468,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	27332345	27336399	chr1:27332345-27336399	0	+	27332345	27332345	8553170	3	1709,131,1021,	0,1805,3033,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	27333462	27336399	chr1:27333462-27336399	0	+	27333462	27333462	8553170	2	592,2249,	0,688,
#Partially deleted in new
chr1	27342019	27353901	chr1:27342019-27353901	1	+	27345334	27353852	789624	14	131,229,149,73,46,37,101,114,161,97,79,100,206,189,	0,3277,5401,5788,5947,7096,7378,7632,7952,8369,9238,9436,11263,11693,
#Partially deleted in new
chr1	27342021	27353932	chr1:27342021-27353932	3	+	27345334	27353852	789624	15	129,229,149,73,46,37,101,114,161,97,159,79,100,206,220,	0,3275,5399,5786,5945,7094,7376,7630,7950,8367,8772,9236,9434,11261,11691,
#Partially deleted in new
chr1	27342040	27353893	chr1:27342040-27353893	1	+	27345334	27353852	789624	15	110,229,149,73,46,73,101,114,161,97,159,79,100,206,181,	0,3256,5380,5767,5926,7039,7357,7611,7931,8348,8753,9217,9415,11242,11672,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	27342056	27353930	chr1:27342056-27353930	0	+	27342056	27342056	8553170	13	311,229,149,73,46,73,368,514,159,79,100,206,218,	0,3240,5364,5751,5910,7023,7341,7915,8737,9201,9399,11226,11656,
#Partially deleted in new
chr1	27343227	27347458	chr1:27343227-27347458	0	+	27345334	27347458	789624	3	45,229,38,	0,2069,4193,
#Partially deleted in new
chr1	27344872	27353930	chr1:27344872-27353930	1	+	27345334	27353852	789624	14	653,149,73,46,73,101,114,161,97,159,79,100,206,218,	0,2548,2935,3094,4207,4525,4779,5099,5516,5921,6385,6583,8410,8840,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	27347543	27353930	chr1:27347543-27353930	0	+	27347543	27347543	8553170	8	26,73,46,73,1939,100,206,218,	0,264,423,1536,1854,3912,5739,6169,
#Partially deleted in new
chr1	27349475	27351545	chr1:27349475-27351545	0	+	27349475	27349475	8553170	6	290,161,97,159,79,90,	0,496,913,1318,1782,1980,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	27349746	27351579	chr1:27349746-27351579	0	+	27349746	27349746	8553170	5	19,514,159,79,124,	0,225,1047,1511,1709,
#Partially deleted in new
chr1	27351074	27353937	chr1:27351074-27353937	0	+	27351074	27351074	8553170	4	262,100,206,225,	0,381,2208,2638,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	27351471	27353930	chr1:27351471-27353930	0	+	27351471	27351471	8553170	2	2017,218,	0,2241,
#Partially deleted in new
chr1	27355183	27356471	chr1:27355183-27356471	0	-	27355379	27356471	789624	3	286,74,84,	0,842,1204,
#Partially deleted in new
chr1	27355185	27366858	chr1:27355185-27366858	1	-	27355390	27366597	789624	28	284,77,74,113,160,106,177,166,139,193,158,106,137,128,134,88,96,50,108,163,160,113,171,107,169,191,140,601,	0,483,840,1202,1404,1823,2214,2525,2995,3233,3523,4231,4672,5055,5519,5735,5971,6160,6334,6519,6905,7455,7665,8256,8731,9018,9587,11072,
#Partially deleted in new
chr1	27355188	27366892	chr1:27355188-27366892	3	-	27355390	27366597	789624	30	281,77,74,113,160,106,177,166,139,193,158,106,137,128,134,88,96,50,108,163,160,113,171,107,169,191,24,140,426,154,	0,480,837,1199,1401,1820,2211,2522,2992,3230,3520,4228,4669,5052,5516,5732,5968,6157,6331,6516,6902,7452,7662,8253,8728,9015,9472,9584,11069,11550,
#Partially deleted in new
chr1	27355355	27357167	chr1:27355355-27357167	0	-	27355355	27355355	8553170	5	114,77,74,113,578,	0,313,670,1032,1234,
#Partially deleted in new
chr1	27355390	27366866	chr1:27355390-27366866	1	-	27355390	27366597	789624	29	79,77,74,113,160,106,177,166,139,193,158,106,137,128,134,88,96,50,108,163,160,113,171,107,169,191,24,140,609,	0,278,635,997,1199,1618,2009,2320,2790,3028,3318,4026,4467,4850,5314,5530,5766,5955,6129,6314,6700,7250,7460,8051,8526,8813,9270,9382,10867,
#Deleted in new
chr1	27356589	27357614	chr1:27356589-27357614	0	-	27356589	27356589	8553170	2	525,215,	0,810,
#Deleted in new
chr1	27357160	27357808	chr1:27357160-27357808	0	-	27357160	27357160	8553170	2	416,98,	0,550,
#Partially deleted in new
chr1	27369111	27374824	chr1:27369111-27374824	3	-	27369235	27374818	0	8	366,135,130,128,33,45,96,97,	0,1484,1731,4024,4376,4853,5244,5616,
#Partially deleted in new
chr1	27369111	27374824	chr1:27369111-27374824	1	-	27369235	27374818	0	7	366,135,130,128,45,96,97,	0,1484,1731,4024,4853,5244,5616,
#Partially deleted in new
chr1	27370472	27373678	chr1:27370472-27373678	0	-	27370472	27370472	8553170	3	258,130,543,	0,370,2663,
#Partially deleted in new
chr1	27373529	27374805	chr1:27373529-27374805	0	-	27373529	27373529	8553170	2	922,78,	0,1198,
#Deleted in new
chr1	27379175	27383303	chr1:27379175-27383303	3	-	27380046	27383239	789624	5	1020,45,72,168,152,	0,2604,3152,3324,3976,
#Deleted in new
chr1	27379175	27383380	chr1:27379175-27383380	1	-	27379502	27383239	789624	6	334,145,45,72,168,229,	0,875,2604,3152,3324,3976,
#Deleted in new
chr1	27381775	27383306	chr1:27381775-27383306	0	-	27381775	27381775	8553170	3	624,168,155,	0,724,1376,
#Partially deleted in new
chr1	27389467	27390145	chr1:27389467-27390145	7	+	27389467	27389467	16724991	2	170,185,	0,493,
#Deleted in new
chr1	27392643	27395814	chr1:27392643-27395814	3	+	27393798	27394791	789624	2	94,2021,	0,1150,
#Partially deleted in new
chr1	27404225	27490158	chr1:27404225-27490158	3	-	27408188	27428890	0	9	4121,515,156,131,118,154,135,173,173,	0,5466,8346,10607,11759,14043,14728,24535,85760,
#Partially deleted in new
chr1	27408196	27490051	chr1:27408196-27490051	1	-	27408324	27428890	0	8	150,156,131,118,154,135,173,66,	0,4375,6636,7788,10072,10757,20564,81789,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	27457197	27459582	chr1:27457197-27459582	3	+	27457197	27457197	8553170	2	141,287,	0,2098,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	27525804	27530561	chr1:27525804-27530561	3	+	27525804	27525804	8553170	2	81,202,	0,4555,
#Partially deleted in new
chr1	27534034	27603592	chr1:27534034-27603592	3	-	27547303	27552115	789624	6	882,4929,38,112,178,196,	0,13226,18857,19039,24671,69362,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	27534272	27603479	chr1:27534272-27603479	1	-	27547303	27552115	789624	6	644,4929,38,231,178,83,	0,12988,18619,18801,24433,69124,
#Partially deleted in new
chr1	27534302	27603632	chr1:27534302-27603632	1	-	27547303	27552115	789624	7	614,4929,38,217,226,178,236,	0,12958,18589,18771,24002,24403,69094,
#Partially deleted in new
chr1	27534660	27604177	chr1:27534660-27604177	1	-	27547303	27552115	789624	7	256,4929,38,217,178,98,18,	0,12600,18231,18413,24045,68736,69499,
#Partially deleted in new
chr1	27534684	27604151	chr1:27534684-27604151	1	-	27547303	27552115	789624	9	232,4929,38,112,226,178,95,136,42,	0,12576,18207,18389,23620,24021,68712,69043,69425,
#Partially deleted in new
chr1	27550868	27604144	chr1:27550868-27604144	0	-	27550868	27550868	8553170	9	982,151,38,217,226,178,98,136,35,	0,1170,2023,2205,7436,7837,52528,52859,53241,
#Partially deleted in new
chr1	27551667	27558361	chr1:27551667-27558361	0	-	27551667	27551667	8553170	5	183,151,38,112,57,	0,371,1224,1406,6637,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	27552495	27603414	chr1:27552495-27603414	0	-	27552495	27552495	8553170	4	434,112,178,18,	0,578,6210,50901,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	27552772	27553545	chr1:27552772-27553545	0	-	27552772	27552772	8553170	2	157,472,	0,301,
#Partially deleted in new
chr1	27553140	27568260	chr1:27553140-27568260	0	-	27553140	27553140	8553170	3	45,178,235,	0,5565,14885,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	27553140	27603633	chr1:27553140-27603633	0	-	27553140	27553140	8553170	4	164,226,178,237,	0,5164,5565,50256,
#Partially deleted in new
chr1	27553145	27604431	chr1:27553145-27604431	0	-	27553145	27553145	8553170	4	40,178,98,272,	0,5560,50251,51014,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	27553225	27603860	chr1:27553225-27603860	0	-	27553225	27553225	8553170	4	65,178,98,133,	0,5480,50171,50502,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	27553298	27603924	chr1:27553298-27603924	0	-	27553298	27553298	8553170	5	6,226,178,98,197,	0,5006,5407,50098,50429,
#Partially deleted in new
chr1	27558328	27604183	chr1:27558328-27604183	0	-	27558328	27558328	8553170	4	202,178,98,24,	0,377,45068,45831,
#Partially deleted in new
chr1	27558813	27604163	chr1:27558813-27604163	0	-	27558813	27558813	8553170	3	70,95,436,	0,44583,44914,
#Partially deleted in new
chr1	27612063	27635277	chr1:27612063-27635277	3	-	27612913	27623916	789624	13	1059,132,154,77,180,156,150,104,99,103,239,63,213,	0,1155,2366,2786,3370,3625,4793,5129,9495,10978,11627,13025,23001,
#Partially deleted in new
chr1	27612291	27626240	chr1:27612291-27626240	1	-	27612913	27623916	789624	13	831,132,154,77,180,156,150,104,99,103,239,63,195,	0,927,2138,2558,3142,3397,4565,4901,9267,10750,11399,12797,13754,
#Partially deleted in new
chr1	27612299	27624062	chr1:27612299-27624062	1	-	27612913	27623916	789624	11	823,132,154,77,180,156,150,104,99,103,372,	0,919,2130,2550,3134,3389,4557,4893,9259,10742,11391,
#Partially deleted in new
chr1	27612668	27626569	chr1:27612668-27626569	0	-	27612913	27623916	789624	13	454,132,154,77,180,156,150,104,99,103,239,63,110,	0,550,1761,2181,2765,3020,4188,4524,8890,10373,11022,12420,13791,
#Partially deleted in new
chr1	27615513	27626135	chr1:27615513-27626135	0	-	27615513	27623916	789624	9	100,156,150,104,99,103,239,63,90,	0,175,1343,1679,6045,7528,8177,9575,10532,
#Partially deleted in new
chr1	27623383	27635134	chr1:27623383-27635134	0	-	27623383	27623383	8553170	3	546,63,70,	0,1705,11681,
#Partially deleted in new
chr1	27623406	27626240	chr1:27623406-27626240	0	-	27623406	27623406	8553170	3	523,63,195,	0,1682,2639,
#Deleted in new
chr1	27649418	27649610	chr1:27649418-27649610	7	+	27649418	27649418	16724991	1	192,	0,
#Partially deleted in new
chr1	27660327	27662722	chr1:27660327-27662722	3	-	27660327	27660327	789624	2	395,46,	0,2349,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	27666060	27672218	chr1:27666060-27672218	1	-	27666380	27669314	789624	5	415,150,78,102,96,	0,2165,2397,3184,6062,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	27666063	27672178	chr1:27666063-27672178	3	-	27666380	27669314	789624	5	412,150,78,126,56,	0,2162,2394,3157,6059,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	27666065	27672198	chr1:27666065-27672198	1	-	27666380	27669314	789624	5	410,150,78,114,76,	0,2160,2392,3167,6057,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	27669467	27670276	chr1:27669467-27670276	3	+	27669467	27669467	8553170	2	119,370,	0,439,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	27669489	27683371	chr1:27669489-27683371	0	+	27669489	27669489	8553170	3	51,132,193,	0,6238,13689,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	27669489	27703049	chr1:27669489-27703049	0	+	27669489	27669489	8553170	3	97,132,249,	0,6238,33311,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	27669489	27691032	chr1:27669489-27691032	0	+	27669489	27669489	8553170	3	51,132,456,	0,6238,21087,
#Partially deleted in new
chr1	27686809	27687471	chr1:27686809-27687471	7	-	27686809	27686809	16724991	1	662,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	27693730	27693835	chr1:27693730-27693835	3	+	27693730	27693730	8553170	1	105,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	27725978	27763122	chr1:27725978-27763122	3	+	27726080	27760581	789624	9	183,65,55,153,158,87,136,102,2628,	0,1493,6624,8052,18675,23089,29216,33547,34516,
#Partially deleted in new
chr1	27725995	27761473	chr1:27725995-27761473	1	+	27726080	27760581	789624	7	166,65,55,158,136,102,979,	0,1476,6607,18658,29199,33530,34499,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	27726027	27761964	chr1:27726027-27761964	1	+	27726080	27760581	789624	8	134,65,55,153,158,136,102,1470,	0,1444,6575,8003,18626,29167,33498,34467,
#Partially deleted in new
chr1	27726027	27759764	chr1:27726027-27759764	1	+	27726080	27759657	789624	8	134,65,55,153,158,87,136,239,	0,1444,6575,8003,18626,23040,29167,33498,
#Deleted in new
chr1	27739090	27739439	chr1:27739090-27739439	7	+	27739090	27739090	16724991	1	349,	0,
#Deleted in new
chr1	27739953	27740629	chr1:27739953-27740629	7	+	27739953	27739953	16724991	1	676,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	27744773	27760185	chr1:27744773-27760185	0	+	27744773	27760056	789624	4	38,136,102,228,	0,10421,14752,15184,
#Partially deleted in new
chr1	27773182	27824452	chr1:27773182-27824452	3	+	27773307	27822329	0	9	243,70,100,138,44,106,73,83,2222,	0,16379,20350,28495,37063,38980,44668,46467,49048,
#Partially deleted in new
chr1	27773234	27812268	chr1:27773234-27812268	0	+	27773307	27812268	789624	7	191,70,100,138,44,69,106,	0,16327,20298,28443,37011,38757,38928,
#Partially deleted in new
chr1	27773254	27802039	chr1:27773254-27802039	0	+	27773254	27773254	8553170	4	171,70,100,362,	0,16307,20278,28423,
#Partially deleted in new
chr1	27773857	27774041	chr1:27773857-27774041	3	+	27773857	27773857	8553170	1	184,	0,
#Partially deleted in new
chr1	27809922	27812234	chr1:27809922-27812234	0	+	27809922	27809922	8553170	2	367,72,	0,2240,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	27810246	27818074	chr1:27810246-27818074	0	+	27810246	27810246	8553170	3	43,106,224,	0,1916,7604,
#Deleted in new
chr1	27819982	27820341	chr1:27819982-27820341	3	+	27819982	27819982	8553170	1	359,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	27824537	27824643	chr1:27824537-27824643	3	+	27824537	27824537	8553170	1	106,	0,
#Partially deleted in new
chr1	27830777	27851676	chr1:27830777-27851676	3	+	27830835	27850446	0	7	114,61,154,221,145,65,1584,	0,1978,7921,10236,12408,16250,19315,
#Partially deleted in new
chr1	27830813	27851528	chr1:27830813-27851528	1	+	27847062	27850446	0	6	553,61,154,145,65,1436,	0,1942,7885,12372,16214,19279,
#Partially deleted in new
chr1	27830821	27851672	chr1:27830821-27851672	1	+	27841168	27850446	0	7	425,61,154,221,145,65,1580,	0,1934,7877,10192,12364,16206,19271,
#Partially deleted in new
chr1	27831323	27850432	chr1:27831323-27850432	0	+	27841168	27850432	789624	7	43,61,154,221,145,65,340,	0,1432,7375,9690,11862,15704,18769,
#Deleted in new
chr1	27834400	27834566	chr1:27834400-27834566	3	+	27834400	27834400	789624	1	166,	0,
#Deleted in new
chr1	27850092	27851676	chr1:27850092-27851676	0	+	27850092	27850092	8553170	2	322,137,	0,1447,
#Partially deleted in new
chr1	27872542	27886685	chr1:27872542-27886685	1	+	27872571	27885922	789624	7	123,141,411,155,531,157,819,	0,4045,7101,9428,9970,12752,13324,
#Partially deleted in new
chr1	27872543	27886685	chr1:27872543-27886685	1	+	27872571	27885431	789624	5	122,141,411,157,819,	0,4044,7100,12751,13323,
#Partially deleted in new
chr1	27872548	27886533	chr1:27872548-27886533	1	+	27872571	27885431	789624	4	117,141,157,667,	0,4039,12746,13318,
#Partially deleted in new
chr1	27872555	27879948	chr1:27872555-27879948	0	+	27872571	27879948	789624	2	110,305,	0,7088,
#Partially deleted in new
chr1	27872557	27882475	chr1:27872557-27882475	0	+	27872571	27882475	789624	3	108,141,505,	0,4030,9413,
#Partially deleted in new
chr1	27872557	27885417	chr1:27872557-27885417	0	+	27872557	27872557	8553170	3	108,531,123,	0,9955,12737,
#Partially deleted in new
chr1	27872567	27886673	chr1:27872567-27886673	3	+	27872571	27885922	789624	6	98,141,411,1073,157,807,	0,4020,7076,9403,12727,13299,
#Partially deleted in new
chr1	27872571	27882604	chr1:27872571-27882604	0	+	27872571	27872571	8553170	4	69,141,411,92,	0,4016,7072,9941,
#Partially deleted in new
chr1	27876683	27882944	chr1:27876683-27882944	0	+	27876683	27876683	8553170	2	45,432,	0,5829,
#Partially deleted in new
chr1	27879730	27886673	chr1:27879730-27886673	0	+	27879730	27885922	789624	5	324,107,531,157,807,	0,2240,2782,5564,6136,
#Partially deleted in new
chr1	27883397	27886673	chr1:27883397-27886673	0	+	27883397	27883397	8553170	2	2054,807,	0,2469,
#Partially deleted in new
chr1	27891523	27914743	chr1:27891523-27914743	3	-	27892162	27914443	0	9	724,95,108,117,75,114,102,107,310,	0,2488,2766,5481,6109,15404,15657,22539,22910,
#Partially deleted in new
chr1	27891537	27897085	chr1:27891537-27897085	0	-	27892162	27897085	789624	5	171,99,95,108,81,	0,611,2474,2752,5467,
#Partially deleted in new
chr1	27891923	27914746	chr1:27891923-27914746	1	-	27892162	27914660	0	9	324,95,108,117,75,114,102,107,120,	0,2088,2366,5081,5709,15004,15257,22139,22703,
#Partially deleted in new
chr1	27892072	27914513	chr1:27892072-27914513	1	-	27892162	27914443	0	8	175,95,108,117,75,114,102,451,	0,1939,2217,4932,5560,14855,15108,21990,
#Partially deleted in new
chr1	27897004	27914588	chr1:27897004-27914588	0	-	27897004	27914443	789624	6	117,75,114,102,107,167,	0,628,9923,10176,17058,17417,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	27934992	27959157	chr1:27934992-27959157	3	+	27935183	27958838	789624	8	252,214,98,144,173,181,134,682,	0,10239,14072,18222,19361,20691,20956,23483,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	27935028	27959157	chr1:27935028-27959157	0	+	27935183	27949027	789624	8	216,214,169,144,173,181,134,682,	0,10203,13965,18186,19325,20655,20920,23447,
#Partially deleted in new
chr1	27935038	27956480	chr1:27935038-27956480	1	+	27935183	27956199	789624	7	206,214,98,144,173,181,532,	0,10193,14026,18176,19315,20645,20910,
#Partially deleted in new
chr1	27935038	27955711	chr1:27935038-27955711	0	+	27935183	27955711	789624	7	206,90,214,98,144,173,28,	0,7236,10193,14026,18176,19315,20645,
#Partially deleted in new
chr1	27935055	27945445	chr1:27935055-27945445	0	+	27935055	27935055	8553170	5	189,127,106,90,214,	0,1481,6415,7219,10176,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	27935109	27959151	chr1:27935109-27959151	1	+	27935183	27958838	789624	7	135,214,98,173,181,134,676,	0,10122,13955,19244,20574,20839,23366,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	27938874	27960193	chr1:27938874-27960193	3	-	27938874	27938874	8553170	5	205,80,84,88,34,	0,16896,17134,19978,21285,
#Partially deleted in new
chr1	27959461	27968096	chr1:27959461-27968096	3	+	27960069	27967200	789624	3	901,197,1594,	0,4035,7041,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	27963636	27966710	chr1:27963636-27966710	0	+	27963636	27963636	8553170	3	57,51,208,	0,548,2866,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	27970343	28088696	chr1:27970343-28088696	3	-	27974465	28058026	789624	18	4203,101,122,115,161,59,90,84,140,184,86,138,137,67,80,44,101,173,	0,8030,18191,19353,23056,26976,29616,33992,40603,42767,46810,57445,65200,68495,72227,78039,87650,118180,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	27970346	28088637	chr1:27970346-28088637	1	-	27974465	28038903	789624	17	4200,101,122,115,161,59,90,84,140,184,86,138,137,67,44,101,114,	0,8027,18188,19350,23053,26973,29613,33989,40600,42764,46807,57442,65197,68492,78036,87647,118177,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	27970346	28088637	chr1:27970346-28088637	1	-	27974465	28058026	789624	17	4200,101,122,115,161,59,90,84,140,184,86,137,67,80,44,101,114,	0,8027,18188,19350,23053,26973,29613,33989,40600,42764,46807,65197,68492,72224,78036,87647,118177,
#Partially deleted in new
chr1	27973467	28058087	chr1:27973467-28058087	1	-	27974465	28038869	789624	14	1079,101,122,115,161,59,90,84,137,184,86,67,80,94,	0,4906,15067,16229,19932,23852,26492,30868,37479,39643,43686,65371,69103,84526,
#Partially deleted in new
chr1	27977272	28088564	chr1:27977272-28088564	1	-	27977281	28058026	789624	17	117,101,122,115,161,59,90,84,140,184,86,137,67,80,44,101,41,	0,1101,11262,12424,16127,20047,22687,27063,33674,35838,39881,58271,61566,65298,71110,80721,111251,
#Partially deleted in new
chr1	27988472	28011086	chr1:27988472-28011086	0	-	27988472	27988472	8553170	7	184,115,161,59,90,84,140,	0,1224,4927,8847,11487,15863,22474,
#Partially deleted in new
chr1	27988478	28088597	chr1:27988478-28088597	0	-	27988478	27988478	789624	17	178,115,161,59,68,90,84,140,184,86,138,137,67,80,44,101,74,	0,1218,4921,8841,9805,11481,15857,22468,24632,28675,39310,47065,50360,54092,59904,69515,100045,
#Deleted in new
chr1	27990157	27990524	chr1:27990157-27990524	7	-	27990157	27990157	16724991	1	367,	0,
#Partially deleted in new
chr1	28010795	28035679	chr1:28010795-28035679	0	-	28010795	28010795	8553170	4	291,184,86,136,	0,2315,6358,24748,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	28031883	28032180	chr1:28031883-28032180	3	-	28031883	28031883	8553170	1	297,	0,
#Partially deleted in new
chr1	28095741	28096422	chr1:28095741-28096422	7	-	28095741	28095741	16724991	1	681,	0,
#Partially deleted in new
chr1	28109738	28110298	chr1:28109738-28110298	7	+	28109738	28109738	16724991	2	139,96,	0,464,
#Partially deleted in new
chr1	28120448	28121321	chr1:28120448-28121321	7	-	28120448	28120448	16724991	2	70,487,	0,386,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	28142736	28142841	chr1:28142736-28142841	3	-	28142736	28142736	8553170	1	105,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	28147165	28177188	chr1:28147165-28177188	1	-	28149992	28151021	0	2	3894,597,	0,29426,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	28147165	28193936	chr1:28147165-28193936	3	-	28149992	28151021	0	3	3894,82,215,	0,29426,46556,
#Partially deleted in new
chr1	28149672	28193873	chr1:28149672-28193873	1	-	28149992	28151021	0	2	1387,152,	0,44049,
#Partially deleted in new
chr1	28200277	28233025	chr1:28200277-28233025	3	-	28201247	28232998	789624	9	1093,76,92,72,95,67,57,102,105,	0,3469,4980,8064,9694,10293,14662,28644,32643,
#Partially deleted in new
chr1	28200558	28233025	chr1:28200558-28233025	0	-	28200558	28200558	8553170	10	812,76,92,72,95,67,57,102,122,105,	0,3188,4699,7783,9413,10012,14381,28363,29572,32362,
#Partially deleted in new
chr1	28205257	28208809	chr1:28205257-28208809	0	-	28205257	28205257	8553170	2	92,468,	0,3084,
#Partially deleted in new
chr1	28210159	28233004	chr1:28210159-28233004	0	-	28210159	28210159	8553170	4	478,57,102,84,	0,4780,18762,22761,
#Partially deleted in new
chr1	28210232	28233020	chr1:28210232-28233020	0	-	28210232	28210232	8553170	5	405,57,102,122,100,	0,4707,18689,19898,22688,
#Deleted in new
chr1	28236108	28238105	chr1:28236108-28238105	1	+	28236183	28237797	789624	3	162,92,345,	0,252,1652,
#Deleted in new
chr1	28236132	28238100	chr1:28236132-28238100	3	+	28236183	28237978	789624	3	138,92,264,	0,228,1704,
#Partially deleted in new
chr1	28236141	28246906	chr1:28236141-28246906	1	+	28236183	28246637	789624	3	129,92,318,	0,219,10447,
#Deleted in new
chr1	28236153	28238098	chr1:28236153-28238098	1	+	28236183	28236456	789624	2	117,1738,	0,207,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	28239508	28241453	chr1:28239508-28241453	3	-	28239508	28239508	8553170	1	1945,	0,
#Deleted in new
chr1	28247143	28247568	chr1:28247143-28247568	3	+	28247143	28247143	8553170	1	425,	0,
#Partially deleted in new
chr1	28259526	28282491	chr1:28259526-28282491	3	+	28259847	28280802	0	10	411,66,198,183,213,151,119,191,145,1776,	0,9656,12147,12757,13054,13831,14513,15298,19570,21189,
#Partially deleted in new
chr1	28329001	28335016	chr1:28329001-28335016	0	+	28329001	28329001	8553170	3	123,139,600,	0,1595,5415,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	28329037	28335967	chr1:28329037-28335967	3	+	28330662	28334970	789624	3	143,139,1551,	0,1559,5379,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	28329054	28335964	chr1:28329054-28335964	1	+	28330662	28334970	789624	4	126,139,670,171,	0,1542,5362,6739,
#Partially deleted in new
chr1	28329061	28330792	chr1:28329061-28330792	0	+	28329061	28329061	8553170	2	119,196,	0,1535,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	28330282	28334585	chr1:28330282-28334585	0	+	28330282	28330282	8553170	3	93,139,169,	0,314,4134,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	28369581	28459239	chr1:28369581-28459239	0	+	28369581	28369581	8553170	5	244,54,116,28,155,	0,37828,63349,88250,89503,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	28369602	28500369	chr1:28369602-28500369	1	+	28407447	28496549	789624	14	223,54,174,81,165,387,598,185,154,56,62,138,77,3836,	0,37807,89482,90609,96082,96779,103951,106504,110848,119567,121348,122047,123412,126931,
#Partially deleted in new
chr1	28369608	28466584	chr1:28369608-28466584	0	+	28407447	28466584	789624	7	217,54,24,174,81,165,203,	0,37801,88223,89476,90603,96076,96773,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	28369709	28497545	chr1:28369709-28497545	0	+	28407447	28433040	789624	15	116,54,116,174,81,165,387,598,185,154,56,62,138,77,1012,	0,37700,63221,89375,90502,95975,96672,103844,106397,110741,119460,121241,121940,123305,126824,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	28369738	28467241	chr1:28369738-28467241	0	+	28369738	28369738	8553170	6	87,54,174,81,165,860,	0,37671,89346,90473,95946,96643,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	28369743	28497156	chr1:28369743-28497156	0	+	28407447	28459232	789624	17	82,54,28,174,81,165,387,598,185,154,56,121,62,138,77,93,623,	0,37666,88088,89341,90468,95941,96638,103810,106363,110707,119426,120030,121207,121906,123271,124486,126790,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	28422554	28422655	chr1:28422554-28422655	3	-	28422554	28422554	8553170	1	101,	0,
#Partially deleted in new
chr1	28438150	28460286	chr1:28438150-28460286	0	+	28438384	28460286	789624	4	280,24,174,75,	0,19681,20934,22061,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	28438170	28497303	chr1:28438170-28497303	3	+	28438384	28496549	789624	13	260,174,81,165,387,598,185,154,56,62,138,77,770,	0,20914,22041,27514,28211,35383,37936,42280,50999,52780,53479,54844,58363,
#Partially deleted in new
chr1	28453540	28453934	chr1:28453540-28453934	7	+	28453540	28453540	16724991	1	394,	0,
#Deleted in new
chr1	28481361	28481480	chr1:28481361-28481480	3	+	28481361	28481361	8553170	1	119,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	28491694	28500364	chr1:28491694-28500364	0	+	28491694	28491694	8553170	4	93,77,738,945,	0,1320,4839,7725,
#Partially deleted in new
chr1	28505942	28539196	chr1:28505942-28539196	3	+	28529866	28538007	0	12	142,33,76,82,188,180,97,123,156,120,153,1365,	0,2185,2887,23915,25860,26228,29107,29315,29928,30319,30804,31889,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	28505979	28510892	chr1:28505979-28510892	3	+	28505979	28505979	789624	3	105,33,2063,	0,2148,2850,
#Partially deleted in new
chr1	28505979	28538968	chr1:28505979-28538968	1	+	28529866	28538007	789624	14	105,33,76,143,82,93,188,180,97,123,156,120,153,1137,	0,2148,2850,10745,23878,24543,25823,26191,29070,29278,29891,30282,30767,31852,
#Partially deleted in new
chr1	28505989	28535899	chr1:28505989-28535899	0	+	28529866	28535899	789624	9	95,33,76,82,188,180,97,123,29,	0,2138,2840,23868,25813,26181,29060,29268,29881,
#Partially deleted in new
chr1	28506042	28508270	chr1:28506042-28508270	0	+	28506042	28506042	8553170	2	42,143,	0,2085,
#Partially deleted in new
chr1	28506055	28535919	chr1:28506055-28535919	0	+	28529866	28535919	789624	11	29,33,76,129,82,188,180,84,97,123,49,	0,2072,2774,10669,23802,25747,26115,26618,28994,29202,29815,
#Partially deleted in new
chr1	28506056	28539300	chr1:28506056-28539300	1	+	28529866	28538007	0	13	28,33,72,143,82,188,180,97,123,156,120,153,1469,	0,2071,2773,10668,23801,25746,26114,28993,29201,29814,30205,30690,31775,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	28506350	28509633	chr1:28506350-28509633	0	+	28506350	28506350	8553170	2	1810,804,	0,2479,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	28508558	28508762	chr1:28508558-28508762	3	+	28508558	28508558	789624	1	204,	0,
#Partially deleted in new
chr1	28510076	28536026	chr1:28510076-28536026	0	+	28529866	28536026	789624	8	28,143,82,188,180,97,123,156,	0,6648,19781,21726,22094,24973,25181,25794,
#Partially deleted in new
chr1	28518135	28538983	chr1:28518135-28538983	1	+	28529866	28538007	0	10	173,82,188,180,97,123,156,120,153,1152,	0,11722,13667,14035,16914,17122,17735,18126,18611,19696,
#Partially deleted in new
chr1	28518256	28538164	chr1:28518256-28538164	1	+	28529866	28538007	0	11	52,82,93,188,180,97,123,156,120,153,333,	0,11601,12266,13546,13914,16793,17001,17614,18005,18490,19575,
#Partially deleted in new
chr1	28518265	28536875	chr1:28518265-28536875	0	+	28529866	28536875	789624	10	43,82,51,188,180,97,123,156,120,129,	0,11592,12257,13537,13905,16784,16992,17605,17996,18481,
#Partially deleted in new
chr1	28518625	28531818	chr1:28518625-28531818	0	+	28518660	28531818	789624	4	332,82,51,16,	0,11232,11897,13177,
#Partially deleted in new
chr1	28518694	28536293	chr1:28518694-28536293	0	+	28529866	28536293	789624	8	263,82,188,180,97,123,156,32,	0,11163,13108,13476,16355,16563,17176,17567,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	28526317	28527227	chr1:28526317-28527227	7	-	28526317	28526317	16724991	2	295,316,	0,594,
#Partially deleted in new
chr1	28531934	28535905	chr1:28531934-28535905	0	+	28531934	28531934	8553170	6	56,180,97,123,47,35,	0,236,3115,3323,3675,3936,
#Deleted in new
chr1	28536092	28537898	chr1:28536092-28537898	0	+	28536092	28536092	8553170	3	289,153,67,	0,654,1739,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	28544459	28546542	chr1:28544459-28546542	3	+	28544459	28544459	8553170	1	2083,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	28553084	28578545	chr1:28553084-28578545	3	+	28553110	28577636	0	9	53,98,100,53,132,120,163,34,1046,	0,555,7548,8261,11618,14209,18091,18782,24415,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	28553086	28565790	chr1:28553086-28565790	0	+	28553086	28553086	8553170	5	651,100,148,53,1088,	0,7546,8026,8259,11616,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	28553096	28554048	chr1:28553096-28554048	0	+	28553096	28553096	8553170	2	41,409,	0,543,
#Partially deleted in new
chr1	28553098	28577744	chr1:28553098-28577744	0	+	28553098	28553098	789624	10	39,98,100,148,53,132,120,163,34,245,	0,541,7534,8014,8247,11604,14195,18077,18768,24401,
#Partially deleted in new
chr1	28553105	28577764	chr1:28553105-28577764	0	+	28553105	28553105	8553170	8	32,98,766,132,120,163,34,265,	0,534,7527,11597,14188,18070,18761,24394,
#Partially deleted in new
chr1	28553106	28561247	chr1:28553106-28561247	0	+	28553106	28553106	8553170	4	31,98,100,380,	0,533,7526,7761,
#Partially deleted in new
chr1	28553232	28561032	chr1:28553232-28561032	0	+	28553232	28553232	8553170	3	75,98,400,	0,407,7400,
#Partially deleted in new
chr1	28553246	28567332	chr1:28553246-28567332	0	+	28553246	28553246	8553170	6	61,98,100,53,132,39,	0,393,7386,8099,11456,14047,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	28553671	28565502	chr1:28553671-28565502	0	+	28553671	28553671	8553170	3	66,766,800,	0,6961,11031,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	28560632	28577775	chr1:28560632-28577775	0	+	28560632	28560632	8553170	8	100,53,132,120,163,34,130,276,	0,713,4070,6661,10543,11234,13956,16867,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	28578537	28581857	chr1:28578537-28581857	0	-	28578537	28578537	8553170	4	143,1114,119,268,	0,995,2573,3052,
#Partially deleted in new
chr1	28578537	28581873	chr1:28578537-28581873	0	-	28578537	28578537	789624	5	143,449,87,119,284,	0,995,2022,2573,3052,
#Partially deleted in new
chr1	28578537	28581010	chr1:28578537-28581010	0	-	28578537	28578537	8553170	4	143,55,70,451,	0,995,1374,2022,
#Partially deleted in new
chr1	28578537	28581878	chr1:28578537-28581878	0	-	28578537	28578537	789624	5	143,449,87,136,289,	0,995,2022,2556,3052,
#Partially deleted in new
chr1	28578537	28581853	chr1:28578537-28581853	1	-	28578537	28578537	789624	5	143,55,70,222,264,	0,995,1374,1887,3052,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	28578537	28581873	chr1:28578537-28581873	0	-	28578537	28578537	8553170	4	143,55,1318,284,	0,995,1374,3052,
#Partially deleted in new
chr1	28578537	28581695	chr1:28578537-28581695	1	-	28578537	28578537	8553170	6	143,55,40,87,119,106,	0,995,1404,2022,2573,3052,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	28578537	28582986	chr1:28578537-28582986	3	-	28578537	28578537	8553170	6	143,55,70,87,119,1397,	0,995,1374,2022,2573,3052,
#Partially deleted in new
chr1	28578538	28581871	chr1:28578538-28581871	0	-	28578538	28578538	8553170	3	142,449,1312,	0,994,2021,
#Partially deleted in new
chr1	28578538	28581623	chr1:28578538-28581623	1	-	28578538	28578538	8553170	6	142,55,70,87,136,34,	0,994,1373,2021,2555,3051,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	28578540	28582983	chr1:28578540-28582983	1	-	28578540	28578540	789624	6	140,55,70,87,119,894,	0,992,1371,2019,2570,3549,
#Partially deleted in new
chr1	28578545	28581818	chr1:28578545-28581818	1	-	28578545	28578545	789624	6	135,55,40,87,136,229,	0,987,1396,2014,2548,3044,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	28578590	28580185	chr1:28578590-28580185	0	-	28578590	28578590	8553170	3	90,55,244,	0,942,1351,
#Partially deleted in new
chr1	28578748	28578822	chr1:28578748-28578822	3	-	28578748	28578748	789624	1	74,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	28579009	28581867	chr1:28579009-28581867	1	-	28579009	28579009	8553170	5	578,70,87,136,278,	0,902,1550,2084,2580,
#Partially deleted in new
chr1	28579763	28579893	chr1:28579763-28579893	3	-	28579763	28579763	789624	1	130,	0,
#Partially deleted in new
chr1	28579843	28581871	chr1:28579843-28581871	0	-	28579843	28579843	8553170	3	138,670,282,	0,716,1746,
#Partially deleted in new
chr1	28580334	28581853	chr1:28580334-28581853	0	-	28580334	28580334	8553170	3	312,136,264,	0,759,1255,
#Partially deleted in new
chr1	28580380	28580512	chr1:28580380-28580512	3	-	28580380	28580380	789624	1	132,	0,
#Partially deleted in new
chr1	28580919	28581056	chr1:28580919-28581056	3	-	28580919	28580919	8553170	1	137,	0,
#Partially deleted in new
chr1	28580919	28581054	chr1:28580919-28581054	3	-	28580919	28580919	789624	1	135,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	28581134	28583132	chr1:28581134-28583132	0	-	28581134	28581134	8553170	1	1998,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	28592199	28595443	chr1:28592199-28595443	1	+	28593799	28594117	789624	2	200,1750,	0,1494,
#Partially deleted in new
chr1	28592494	28594300	chr1:28592494-28594300	3	+	28592511	28594117	789624	2	250,607,	0,1199,
#Partially deleted in new
chr1	28602849	28643066	chr1:28602849-28643066	3	-	28603538	28622081	0	6	725,89,115,78,252,75,	0,2522,10397,15103,19064,40142,
#Partially deleted in new
chr1	28603100	28643005	chr1:28603100-28643005	1	-	28603538	28622081	0	6	474,89,115,78,252,351,	0,2271,10146,14852,18813,39554,
#Partially deleted in new
chr1	28613246	28643085	chr1:28613246-28643085	0	-	28613246	28613246	8553170	5	115,78,252,85,94,	0,4706,8667,10699,29745,
#Partially deleted in new
chr1	28643227	28648530	chr1:28643227-28648530	3	+	28643227	28643227	789624	2	290,334,	0,4969,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	28646090	28648581	chr1:28646090-28648581	1	+	28646090	28646090	8553170	2	299,389,	0,2102,
#Deleted in new
chr1	28648599	28648733	chr1:28648599-28648733	3	+	28648599	28648599	5263520	1	134,	0,
#Deleted in new
chr1	28648599	28648730	chr1:28648599-28648730	3	+	28648599	28648599	8553170	1	131,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	28668731	28719353	chr1:28668731-28719353	1	+	28683612	28714773	0	10	108,158,83,125,104,158,132,138,123,5281,	0,14851,21372,22853,24210,28195,33706,35460,41788,45341,
#Partially deleted in new
chr1	28668777	28714886	chr1:28668777-28714886	1	+	28683612	28714773	0	10	62,155,83,125,104,158,132,138,123,814,	0,14808,21326,22807,24164,28149,33660,35414,41742,45295,
#Partially deleted in new
chr1	28668779	28714873	chr1:28668779-28714873	3	+	28683612	28714773	0	10	60,158,113,125,104,158,132,138,123,801,	0,14803,21294,22805,24162,28147,33658,35412,41740,45293,
#Partially deleted in new
chr1	28683563	28715065	chr1:28683563-28715065	0	+	28683563	28683563	8553170	9	177,113,125,104,158,132,138,123,993,	0,6510,8021,9378,13363,18874,20628,26956,30509,
#Partially deleted in new
chr1	28689664	28689794	chr1:28689664-28689794	3	+	28689664	28689664	8553170	1	130,	0,
#Partially deleted in new
chr1	28736620	28742871	chr1:28736620-28742871	0	+	28737120	28742871	789624	5	189,101,25,80,469,	0,426,1037,1638,5782,
#Partially deleted in new
chr1	28736620	28769774	chr1:28736620-28769774	3	+	28737120	28768952	0	6	189,101,25,80,1584,846,	0,426,1037,1638,5782,32308,
#Partially deleted in new
chr1	28736758	28769775	chr1:28736758-28769775	1	+	28737120	28768952	0	5	389,25,80,1584,847,	0,899,1500,5644,32170,
#Partially deleted in new
chr1	28736939	28769775	chr1:28736939-28769775	1	+	28742420	28768952	0	4	208,80,1584,847,	0,1319,5463,31989,
#Partially deleted in new
chr1	28736949	28769125	chr1:28736949-28769125	0	+	28736949	28736949	8553170	4	733,80,1584,197,	0,1309,5453,31979,
#Partially deleted in new
chr1	28736964	28743002	chr1:28736964-28743002	0	+	28737120	28743002	789624	4	183,25,71,600,	0,693,1294,5438,
#Partially deleted in new
chr1	28737749	28742632	chr1:28737749-28742632	0	+	28737749	28737749	8553170	3	48,80,230,	0,509,4653,
#Partially deleted in new
chr1	28737749	28742899	chr1:28737749-28742899	0	+	28737749	28737749	8553170	3	80,80,497,	0,509,4653,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	28739090	28742883	chr1:28739090-28742883	0	+	28739090	28739090	8553170	3	110,96,481,	0,1212,3312,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	28812141	28871267	chr1:28812141-28871267	3	+	28812383	28863283	0	3	469,350,8526,	0,46812,50600,
#Partially deleted in new
chr1	28812141	28863283	chr1:28812141-28863283	1	+	28812383	28863283	789624	4	469,350,92,306,	0,46812,50600,50836,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	28870482	28877336	chr1:28870482-28877336	3	-	28870482	28870482	8553170	3	520,249,316,	0,1757,6538,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	28881725	28881835	chr1:28881725-28881835	3	-	28881725	28881725	8553170	1	110,	0,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr1	28887090	29120046	chr1:28887090-29120046	1	+	28987437	29115797	0	21	120,475,213,105,43,76,219,88,153,98,173,209,57,42,63,177,129,102,81,105,3228,	0,100340,106239,110124,124774,128601,131133,143309,146002,148735,152163,166013,171498,171720,173331,177891,210716,222245,225277,228608,229728,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	28887090	29120046	chr1:28887090-29120046	1	+	28993488	29115797	789624	19	120,475,213,105,43,76,219,88,153,98,173,209,63,177,129,102,81,105,3228,	0,100340,106239,110124,124774,128601,131133,143309,146002,148735,152163,166013,173331,177891,210716,222245,225277,228608,229728,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr1	28887090	29120020	chr1:28887090-29120020	3	+	28993488	29115797	0	21	120,475,80,213,105,43,76,219,88,153,98,173,209,57,63,177,129,102,81,105,3202,	0,100340,102265,106239,110124,124774,128601,131133,143309,146002,148735,152163,166013,171498,173331,177891,210716,222245,225277,228608,229728,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	28887090	29120041	chr1:28887090-29120041	1	+	28993488	29115797	789624	18	120,458,213,105,43,76,219,88,153,98,173,209,177,129,102,81,105,3223,	0,100357,106239,110124,124774,128601,131133,143309,146002,148735,152163,166013,177891,210716,222245,225277,228608,229728,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	28887102	29072956	chr1:28887102-29072956	1	+	28993488	29069294	789624	16	108,458,213,105,43,76,219,88,153,98,173,206,57,177,51,3791,	0,100345,106227,110112,124762,128589,131121,143297,145990,148723,152151,166004,171486,177879,181630,182063,
#Partially deleted in new
chr1	28887102	29072169	chr1:28887102-29072169	1	+	28993488	29070615	789624	15	108,458,213,105,43,76,219,88,153,98,173,209,177,51,1806,	0,100345,106227,110112,124762,128589,131121,143297,145990,148723,152151,166001,177879,181630,183261,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	28887102	29073093	chr1:28887102-29073093	0	+	28993488	29065761	789624	19	108,458,213,105,43,76,219,88,153,98,173,209,57,42,63,177,142,36,3928,	0,100345,106227,110112,124762,128589,131121,143297,145990,148723,152151,166001,171486,171708,173319,177879,178581,181630,182063,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	28887102	29081664	chr1:28887102-29081664	0	+	28887102	28887102	8553170	15	108,458,213,105,43,76,219,88,153,98,173,209,57,177,2224,	0,100345,106227,110112,124762,128589,131121,143297,145990,148723,152151,166001,171486,177879,192338,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	28887118	29065736	chr1:28887118-29065736	0	+	28887118	28887118	8553170	14	92,458,213,105,43,76,219,88,153,98,173,206,177,53,	0,100329,106211,110096,124746,128573,131105,143281,145974,148707,152135,165988,177863,178565,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr1	28887120	29120033	chr1:28887120-29120033	1	+	28993488	29115797	789624	21	90,458,213,105,43,76,219,88,153,98,173,209,57,42,63,177,129,102,81,105,3215,	0,100327,106209,110094,124744,128571,131103,143279,145972,148705,152133,165983,171468,171690,173301,177861,210686,222215,225247,228578,229698,
#Partially deleted in new
chr1	28887123	29117114	chr1:28887123-29117114	1	+	28993488	29115797	0	19	87,458,80,213,105,43,76,219,88,153,98,173,209,63,177,129,81,105,296,	0,100324,102232,106206,110091,124741,128568,131100,143276,145969,148702,152130,165980,173298,177858,210683,225244,228575,229695,
#Partially deleted in new
chr1	28887123	29117114	chr1:28887123-29117114	0	+	28987437	28989373	789624	21	87,475,80,213,105,43,76,219,88,153,98,173,209,57,63,177,129,102,81,105,296,	0,100307,102232,106206,110091,124741,128568,131100,143276,145969,148702,152130,165980,171465,173298,177858,210683,222212,225244,228575,229695,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	28887123	29118846	chr1:28887123-29118846	1	+	28993488	29115797	8553170	17	87,458,213,105,43,76,219,88,153,98,173,209,129,102,81,105,2028,	0,100324,106206,110091,124741,128568,131100,143276,145969,148702,152130,165980,210683,222212,225244,228575,229695,
#Partially deleted in new
chr1	28887171	29117114	chr1:28887171-29117114	1	+	28987437	29115797	0	17	39,475,213,43,76,219,88,153,98,173,209,177,129,102,81,105,296,	0,100259,106158,124693,128520,131052,143228,145921,148654,152082,165932,177810,210635,222164,225196,228527,229647,
#Partially deleted in new
chr1	28893370	29065163	chr1:28893370-29065163	0	+	28987437	29065163	789624	13	467,475,213,105,43,76,219,88,153,98,173,209,182,	0,94060,99959,103844,118494,122321,124853,137029,139722,142455,145883,159733,171611,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr1	28893740	29120046	chr1:28893740-29120046	1	+	28987437	29115797	0	21	97,475,213,105,43,76,219,88,153,98,173,209,57,42,63,177,129,102,81,105,3228,	0,93690,99589,103474,118124,121951,124483,136659,139352,142085,145513,159363,164848,165070,166681,171241,204066,215595,218627,221958,223078,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	28914543	29072293	chr1:28914543-29072293	1	+	28987437	29069294	789624	18	225,475,213,105,43,76,219,88,153,98,173,209,57,42,63,177,51,3128,	0,72887,78786,82671,97321,101148,103680,115856,118549,121282,124710,138560,144045,144267,145878,150438,154189,154622,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	28914561	29114611	chr1:28914561-29114611	0	+	28914561	28914561	8553170	15	207,475,213,43,76,219,88,153,98,173,206,177,129,102,2244,	0,72869,78768,97303,101130,103662,115838,118531,121264,124692,138545,150420,183245,194774,197806,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	28914566	29072280	chr1:28914566-29072280	1	+	28987437	29069294	789624	17	202,475,213,105,43,76,219,88,153,98,173,209,57,42,177,51,3115,	0,72864,78763,82648,97298,101125,103657,115833,118526,121259,124687,138537,144022,144244,150415,154166,154599,
#Partially deleted in new
chr1	28914568	29072312	chr1:28914568-29072312	1	+	28987437	29070615	789624	17	200,475,105,43,76,219,88,153,98,173,209,57,42,63,177,51,1922,	0,72862,82646,97296,101123,103655,115831,118524,121257,124685,138535,144020,144242,145853,150413,154164,155822,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	28914568	29065899	chr1:28914568-29065899	1	+	28987437	29065179	8553170	13	205,475,43,76,219,88,153,98,173,209,57,42,918,	0,72862,97296,101123,103655,115831,118524,121257,124685,138535,144020,144242,150413,
#Partially deleted in new
chr1	28914568	29072169	chr1:28914568-29072169	1	+	28987437	29070615	8553170	17	200,475,213,105,43,76,219,88,153,98,173,209,57,42,177,51,1806,	0,72862,78761,82646,97296,101123,103655,115831,118524,121257,124685,138535,144020,144242,150413,154164,155795,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	28914571	29072173	chr1:28914571-29072173	1	+	28987437	29069294	789624	18	197,475,213,105,43,76,219,88,153,98,173,209,57,42,63,177,36,3008,	0,72859,78758,82643,97293,101120,103652,115828,118521,121254,124682,138532,144017,144239,145850,150410,154161,154594,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	28914571	29065616	chr1:28914571-29065616	0	+	28987437	29035086	8553170	17	197,475,213,105,43,76,219,88,153,278,98,173,209,57,42,63,635,	0,72859,78758,82643,97293,101120,103652,115828,118521,120434,121254,124682,138532,144017,144239,145850,150410,
#Partially deleted in new
chr1	28914573	29065221	chr1:28914573-29065221	1	+	28987437	29065179	0	15	195,475,213,105,43,76,219,88,153,98,173,209,57,63,240,	0,72857,78756,82641,97291,101118,103650,115826,118519,121252,124680,138530,144015,145848,150408,
#Partially deleted in new
chr1	28914600	29117048	chr1:28914600-29117048	1	+	28987437	29115797	789624	20	168,475,213,105,43,76,219,88,153,98,173,209,57,177,36,129,102,81,105,230,	0,72830,78729,82614,97264,101091,103623,115799,118492,121225,124653,138503,143988,150381,154132,183206,194735,197767,201098,202218,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	28914625	29065950	chr1:28914625-29065950	1	+	28987437	29065179	789624	13	143,475,213,105,43,76,219,88,153,98,173,209,969,	0,72805,78704,82589,97239,101066,103598,115774,118467,121200,124628,138478,150356,
#Deleted in new
chr1	28982277	28982608	chr1:28982277-28982608	7	-	28982277	28982277	16724991	1	331,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	28985709	28985810	chr1:28985709-28985810	3	+	28985709	28985709	8553170	1	101,	0,
#Partially deleted in new
chr1	28987497	29072224	chr1:28987497-29072224	0	+	28987497	28987497	8553170	16	408,213,43,76,219,88,153,98,173,209,57,42,63,177,36,1861,	0,5832,24367,28194,30726,42902,45595,48328,51756,65606,71091,71313,72924,77484,81235,82866,
#Partially deleted in new
chr1	28987510	29072350	chr1:28987510-29072350	0	+	28987510	28987510	8553170	17	395,213,105,43,76,219,88,153,98,173,209,57,42,63,177,36,1965,	0,5819,9704,24354,28181,30713,42889,45582,48315,51743,65593,71078,71300,72911,77471,81222,82875,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	28987510	29054514	chr1:28987510-29054514	0	+	28987510	28987510	8553170	11	395,213,105,43,76,219,88,153,98,173,1408,	0,5819,9704,24354,28181,30713,42889,45582,48315,51743,65596,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	28987610	29065607	chr1:28987610-29065607	0	+	28987610	29031841	789624	13	295,213,105,43,76,219,88,126,153,98,173,209,626,	0,5719,9604,24254,28081,30613,42789,44177,45482,48215,51643,65493,77371,
#Partially deleted in new
chr1	29015691	29072806	chr1:29015691-29072806	0	+	29015691	29070615	789624	10	76,219,88,153,98,173,206,177,36,2416,	0,2532,14708,17401,20134,23562,37415,49290,53041,54699,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	29018358	29072314	chr1:29018358-29072314	0	+	29018358	29069294	789624	9	84,88,153,98,173,209,177,51,3149,	0,12041,14734,17467,20895,34745,46623,50374,50807,
#Partially deleted in new
chr1	29039417	29069522	chr1:29039417-29069522	0	+	29039417	29069294	789624	7	9,206,57,42,63,177,357,	0,13689,19171,19393,21004,25564,29748,
#Partially deleted in new
chr1	29053163	29097904	chr1:29053163-29097904	0	+	29053163	29097904	789624	5	149,57,177,450,98,	0,5425,11818,42991,44643,
#Partially deleted in new
chr1	29058603	29097849	chr1:29058603-29097849	0	+	29058603	29058603	8553170	3	42,177,43,	0,6378,39203,
#Partially deleted in new
chr1	29064956	29117121	chr1:29064956-29117121	0	+	29064956	29064956	8553170	6	202,129,102,81,105,303,	0,32850,44379,47411,50742,51862,
#Partially deleted in new
chr1	29082465	29109346	chr1:29082465-29109346	0	+	29082465	29082465	8553170	4	292,128,129,11,	0,1529,15341,26870,
#Partially deleted in new
chr1	29083896	29115702	chr1:29083896-29115702	0	+	29083896	29083896	8553170	5	226,129,102,81,4,	0,13910,25439,28471,31802,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	29096231	29120038	chr1:29096231-29120038	0	+	29096231	29096231	8553170	5	1704,102,81,105,3220,	0,13104,16136,19467,20587,
#Partially deleted in new
chr1	29097586	29109738	chr1:29097586-29109738	0	+	29097586	29097586	8553170	2	349,403,	0,11749,
#Deleted in new
chr1	29119427	29123935	chr1:29119427-29123935	3	-	29120904	29121828	789624	2	2421,80,	0,4428,
#Deleted in new
chr1	29119433	29122501	chr1:29119433-29122501	1	-	29120904	29121828	789624	2	2415,138,	0,2930,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	29144493	29146994	chr1:29144493-29146994	3	-	29144493	29144493	8553170	3	56,136,87,	0,1861,2414,
#Partially deleted in new
chr1	29147742	29181987	chr1:29147742-29181987	3	-	29148409	29181752	789624	6	1484,90,215,113,143,342,	0,2360,6953,11631,12632,33903,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	29147852	29173494	chr1:29147852-29173494	0	-	29147852	29147852	8553170	7	1374,90,215,1144,175,138,4992,	0,2250,6843,11521,18037,18876,20650,
#Partially deleted in new
chr1	29148670	29181882	chr1:29148670-29181882	0	-	29148670	29181752	789624	5	556,215,113,143,237,	0,6025,10703,11704,32975,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	29154474	29159551	chr1:29154474-29159551	0	-	29154474	29154474	8553170	2	436,178,	0,4899,
#Partially deleted in new
chr1	29154696	29160563	chr1:29154696-29160563	0	-	29154696	29154696	8553170	3	214,113,189,	0,4677,5678,
#Partially deleted in new
chr1	29154735	29181890	chr1:29154735-29181890	0	-	29166008	29181752	789624	8	175,113,228,143,175,184,136,245,	0,4638,5128,5639,11154,11993,13767,26910,
#Partially deleted in new
chr1	29154871	29159540	chr1:29154871-29159540	0	-	29154871	29154871	8553170	2	39,167,	0,4502,
#Deleted in new
chr1	29159383	29160469	chr1:29159383-29160469	0	-	29160017	29160469	789624	3	103,195,95,	0,480,991,
#Deleted in new
chr1	29171284	29171453	chr1:29171284-29171453	3	-	29171284	29171284	8553170	1	169,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	29192872	29230924	chr1:29192872-29230924	3	-	29194021	29216633	0	10	1307,73,61,74,103,103,144,132,225,194,	0,3068,3325,7643,9070,10258,13889,23132,23715,37858,
#Partially deleted in new
chr1	29193810	29203201	chr1:29193810-29203201	0	-	29193810	29193810	8553170	6	369,102,61,74,103,71,	0,2130,2387,6705,8132,9320,
#Partially deleted in new
chr1	29193816	29230932	chr1:29193816-29230932	1	-	29194021	29230906	0	10	363,73,61,74,103,103,144,132,98,202,	0,2124,2381,6699,8126,9314,12945,22188,22771,36914,
#Partially deleted in new
chr1	29193816	29200589	chr1:29193816-29200589	0	-	29193816	29193816	8553170	4	363,73,61,74,	0,2124,2381,6699,
#Partially deleted in new
chr1	29193873	29216613	chr1:29193873-29216613	0	-	29193873	29193873	8553170	8	306,73,61,74,103,144,132,26,	0,2067,2324,6642,8069,12888,22131,22714,
#Partially deleted in new
chr1	29194031	29216029	chr1:29194031-29216029	0	-	29196068	29216029	789624	7	148,318,74,103,103,144,25,	0,1909,6484,7911,9099,12730,21973,
#Partially deleted in new
chr1	29195943	29206828	chr1:29195943-29206828	0	-	29195943	29195943	8553170	7	70,61,74,145,103,103,67,	0,254,4572,5430,5999,7187,10818,
#Partially deleted in new
chr1	29195946	29220912	chr1:29195946-29220912	0	-	29195946	29195946	8553170	9	67,61,74,103,103,144,132,98,75,	0,251,4569,5996,7184,10815,20058,20641,24891,
#Partially deleted in new
chr1	29196141	29230894	chr1:29196141-29230894	0	-	29196141	29196141	8553170	7	117,74,103,144,132,98,164,	0,4374,5801,10620,19863,20446,34589,
#Partially deleted in new
chr1	29200323	29203170	chr1:29200323-29203170	0	-	29200323	29200323	8553170	3	266,103,40,	0,1619,2807,
#Partially deleted in new
chr1	29202016	29230901	chr1:29202016-29230901	0	-	29202016	29202016	8553170	7	29,144,132,225,84,121,171,	0,4745,13988,14571,18821,21123,28714,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	29203141	29230906	chr1:29203141-29230906	0	-	29203141	29203141	8553170	7	92,144,132,98,205,121,176,	0,3620,12863,13446,17575,19998,27589,
#Partially deleted in new
chr1	29203215	29230897	chr1:29203215-29230897	0	-	29203215	29203215	8553170	6	18,144,132,225,84,167,	0,3546,12789,13372,17622,27515,
#Partially deleted in new
chr1	29206773	29230915	chr1:29206773-29230915	0	-	29206773	29206773	8553170	5	132,132,98,84,185,	0,9231,9814,14064,23957,
#Partially deleted in new
chr1	29216036	29223549	chr1:29216036-29223549	0	-	29216036	29216036	8553170	4	100,98,84,410,	0,551,4801,7103,
#Partially deleted in new
chr1	29216600	29230942	chr1:29216600-29230942	0	-	29216600	29216600	8553170	3	212,174,212,	0,12280,14130,
#Deleted in new
chr1	29223932	29224816	chr1:29223932-29224816	3	+	29223932	29223932	8553170	3	332,147,94,	0,532,790,
#Partially deleted in new
chr1	29236515	29325661	chr1:29236515-29325661	3	+	29236644	29325661	789624	31	202,132,272,82,116,175,294,309,110,202,103,274,37,139,30,158,191,76,77,37,98,117,155,136,150,174,141,126,158,136,63,	0,18759,21989,22745,22933,23354,24094,38932,42496,42940,43523,46160,47424,48215,53167,55353,67339,68258,68836,74228,74940,75127,76036,78856,79486,81232,84169,86855,87115,88675,89083,
#Partially deleted in new
chr1	29236515	29326800	chr1:29236515-29326800	1	+	29236644	29325661	789624	30	202,132,272,82,116,175,294,309,110,202,103,274,37,139,158,191,76,77,37,98,117,155,136,150,174,141,126,158,136,1202,	0,18759,21989,22745,22933,23354,24094,38932,42496,42940,43523,46160,47424,48215,55353,67339,68258,68836,74228,74940,75127,76036,78856,79486,81232,84169,86855,87115,88675,89083,
#Partially deleted in new
chr1	29236548	29326813	chr1:29236548-29326813	1	+	29236644	29325661	789624	30	169,132,272,82,116,175,294,309,110,202,103,274,37,139,158,191,76,77,37,89,117,155,136,150,174,141,126,158,136,1215,	0,18726,21956,22712,22900,23321,24061,38899,42463,42907,43490,46127,47391,48182,55320,67306,68225,68803,74195,74907,75094,76003,78823,79453,81199,84136,86822,87082,88642,89050,
#Partially deleted in new
chr1	29236638	29326669	chr1:29236638-29326669	1	+	29236644	29325661	789624	31	79,132,272,82,116,175,294,309,110,202,103,274,37,139,158,191,76,77,18,37,98,117,155,136,150,174,141,126,152,136,1071,	0,18636,21866,22622,22810,23231,23971,38809,42373,42817,43400,46037,47301,48092,55230,67216,68135,68713,70490,74105,74817,75004,75913,78733,79363,81109,84046,86732,86998,88552,88960,
#Partially deleted in new
chr1	29260180	29275685	chr1:29260180-29275685	0	+	29260180	29260180	8553170	3	87,294,238,	0,429,15267,
#Partially deleted in new
chr1	29279550	29312706	chr1:29279550-29312706	0	+	29279550	29279550	8553170	14	107,103,274,37,139,30,158,191,76,77,37,89,117,155,	0,488,3125,4389,5180,10132,12318,24304,25223,25801,31193,31905,32092,33001,
#Partially deleted in new
chr1	29283722	29304040	chr1:29283722-29304040	0	+	29283722	29283722	8553170	4	254,139,158,186,	0,1008,8146,20132,
#Partially deleted in new
chr1	29311345	29312659	chr1:29311345-29312659	0	+	29311345	29311345	8553170	3	199,117,108,	0,297,1206,
#Partially deleted in new
chr1	29317759	29325298	chr1:29317759-29325298	0	+	29317759	29317759	8553170	5	162,141,126,158,108,	0,2925,5611,5871,7431,
#Partially deleted in new
chr1	29320209	29326212	chr1:29320209-29326212	0	+	29320209	29320209	8553170	5	616,126,158,136,614,	0,3161,3421,4981,5389,
#Deleted in new
chr1	29323217	29325650	chr1:29323217-29325650	0	+	29323217	29323217	8553170	4	279,158,136,52,	0,413,1973,2381,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	29329619	29350114	chr1:29329619-29350114	3	-	29329619	29329619	789624	3	1573,143,432,	0,3546,20063,
#Partially deleted in new
chr1	29488192	29496893	chr1:29488192-29496893	7	-	29488192	29488192	16724991	2	193,156,	0,8545,
#Deleted in new
chr1	29708850	29709547	chr1:29708850-29709547	3	-	29708850	29708850	8553170	2	274,224,	0,473,
#Deleted in new
chr1	29904864	29905357	chr1:29904864-29905357	7	-	29904864	29904864	16724991	1	493,	0,
#Partially deleted in new
chr1	30013951	30037612	chr1:30013951-30037612	3	-	30013951	30013951	789624	7	558,52,202,159,201,232,115,	0,1292,2768,11073,15338,22820,23546,
#Deleted in new
chr1	30226522	30226615	chr1:30226522-30226615	7	+	30226522	30226522	16724991	1	93,	0,
#Partially deleted in new
chr1	30409559	30411638	chr1:30409559-30411638	3	-	30409559	30409559	8553170	3	165,156,186,	0,1364,1893,
#Partially deleted in new
chr1	30415824	30421108	chr1:30415824-30421108	3	+	30415824	30415824	8553170	3	49,107,325,	0,1022,4959,
#Partially deleted in new
chr1	30711276	30723587	chr1:30711276-30723587	3	-	30713581	30723551	789624	8	2355,81,153,417,126,223,347,130,	0,2970,3880,4632,5513,7458,10128,12181,
#Deleted in new
chr1	30713766	30716135	chr1:30713766-30716135	0	-	30713766	30713766	8553170	3	561,153,227,	0,1390,2142,
#Partially deleted in new
chr1	30716025	30719251	chr1:30716025-30719251	0	-	30716025	30716025	8553170	3	300,126,517,	0,764,2709,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	30718503	30726744	chr1:30718503-30726744	3	+	30718503	30718503	8553170	4	2671,435,317,502,	0,2784,7231,7739,
#Partially deleted in new
chr1	30718771	30726827	chr1:30718771-30726827	0	+	30718771	30718771	789624	4	794,435,317,585,	0,2516,6963,7471,
#Partially deleted in new
chr1	30718781	30721723	chr1:30718781-30721723	0	+	30718781	30718781	8553170	2	451,436,	0,2506,
#Partially deleted in new
chr1	30719173	30726763	chr1:30719173-30726763	1	+	30719173	30719173	8553170	5	59,198,435,317,521,	0,1803,2114,6561,7069,
#Deleted in new
chr1	30725719	30726364	chr1:30725719-30726364	0	+	30725719	30725719	8553170	2	332,122,	0,523,
#Partially deleted in new
chr1	30732468	30757820	chr1:30732468-30757820	3	-	30733827	30757745	789624	8	1449,93,96,123,129,77,94,162,	0,2704,5135,6471,7340,9171,9987,25190,
#Partially deleted in new
chr1	30733888	30746229	chr1:30733888-30746229	0	-	30733888	30733888	8553170	8	29,93,96,123,129,77,94,312,	0,1284,3715,5051,5920,7751,8567,12029,
#Deleted in new
chr1	30739155	30739232	chr1:30739155-30739232	3	-	30739155	30739155	5263520	1	77,	0,
#Partially deleted in new
chr1	30741688	30757757	chr1:30741688-30757757	0	-	30741688	30741688	8553170	2	861,99,	0,15970,
#Partially deleted in new
chr1	30810377	30815553	chr1:30810377-30815553	3	-	30810377	30810377	8553170	2	337,107,	0,5069,
#Partially deleted in new
chr1	30824297	30834103	chr1:30824297-30834103	0	+	30824297	30824297	8553170	4	76,139,135,598,	0,1758,5450,9208,
#Partially deleted in new
chr1	30824297	30834102	chr1:30824297-30834102	0	+	30824297	30824297	8553170	3	76,135,597,	0,5450,9208,
#Partially deleted in new
chr1	30824626	30834276	chr1:30824626-30834276	0	+	30824626	30824626	8553170	4	202,64,135,771,	0,1504,5121,8879,
#Partially deleted in new
chr1	30824674	30833733	chr1:30824674-30833733	0	+	30824674	30824674	8553170	3	154,64,228,	0,1456,8831,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	30843822	30844110	chr1:30843822-30844110	3	+	30843822	30843822	8553170	1	288,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	30858157	30860254	chr1:30858157-30860254	3	+	30858157	30858157	8553170	2	209,1538,	0,559,
#Partially deleted in new
chr1	30869466	30878740	chr1:30869466-30878740	1	-	30873210	30877247	789624	3	3911,292,2189,	0,4830,7085,
#Partially deleted in new
chr1	30873134	30908761	chr1:30873134-30908761	3	-	30873210	30908586	789624	5	243,292,614,118,313,	0,1162,3417,5488,35314,
#Deleted in new
chr1	30876766	30881429	chr1:30876766-30881429	0	-	30876766	30876766	8553170	3	399,118,72,	0,1856,4591,
#Deleted in new
chr1	30878675	30880769	chr1:30878675-30880769	0	-	30878675	30878675	8553170	4	65,84,38,168,	0,253,1301,1926,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	30918468	30918735	chr1:30918468-30918735	3	-	30918468	30918468	8553170	1	267,	0,
#Partially deleted in new
chr1	30931505	31065698	chr1:30931505-31065698	3	-	30933210	31059566	0	22	1837,193,122,126,138,129,130,268,237,297,144,139,152,102,94,271,167,179,109,69,374,83,	0,5137,9645,10492,13840,18627,20728,22208,33168,34476,35661,36848,43145,48556,49806,60884,63548,74347,75488,97290,127698,134110,
#Partially deleted in new
chr1	30931505	31065704	chr1:30931505-31065704	1	-	30933210	31059566	789624	22	1837,193,122,126,138,135,130,268,237,297,144,139,152,105,94,271,167,179,109,69,374,89,	0,5137,9645,10492,13840,18621,20728,22208,33168,34476,35661,36848,43145,48556,49806,60884,63548,74347,75488,97290,127698,134110,
#Partially deleted in new
chr1	30931505	31065695	chr1:30931505-31065695	1	-	30933210	31059566	789624	18	1837,193,122,126,138,129,130,268,237,297,144,139,152,102,94,69,374,80,	0,5137,9645,10492,13840,18627,20728,22208,33168,34476,35661,36848,43145,48556,49806,97290,127698,134110,
#Partially deleted in new
chr1	30932058	31065726	chr1:30932058-31065726	0	-	30933210	31065726	789624	21	1284,193,122,126,138,129,130,268,297,144,139,152,105,94,271,167,179,109,69,374,38,	0,4584,9092,9939,13287,18074,20175,21655,33923,35108,36295,42592,48003,49253,60331,62995,73794,74935,96737,127145,133630,
#Partially deleted in new
chr1	30932825	31065695	chr1:30932825-31065695	1	-	30933210	31059566	0	22	517,193,122,126,138,135,130,268,237,297,144,139,152,102,94,271,167,179,109,69,374,80,	0,3817,8325,9172,12520,17301,19408,20888,31848,33156,34341,35528,41825,47236,48486,59564,62228,73027,74168,95970,126378,132790,
#Partially deleted in new
chr1	30932843	31065684	chr1:30932843-31065684	1	-	30933210	31059566	0	22	499,193,122,126,138,135,130,268,237,216,144,139,152,105,94,271,167,179,109,69,374,69,	0,3799,8307,9154,12502,17283,19390,20870,31830,33138,34323,35510,41807,47218,48468,59546,62210,73009,74150,95952,126360,132772,
#Partially deleted in new
chr1	30932843	30995059	chr1:30932843-30995059	0	-	30933210	30995059	789624	17	499,193,122,126,138,135,130,268,237,297,144,139,152,117,94,271,6,	0,3799,8307,9154,12502,17283,19390,20870,31830,33138,34323,35510,41807,47218,48468,59546,62210,
#Partially deleted in new
chr1	30932849	31065991	chr1:30932849-31065991	1	-	30933210	31065785	789624	22	493,193,122,126,138,135,130,268,237,297,144,139,152,102,94,271,167,179,109,69,374,303,	0,3793,8301,9148,12496,17277,19384,20864,31824,33132,34317,35504,41801,47212,48462,59540,62204,73003,74144,95946,126354,132839,
#Partially deleted in new
chr1	30933079	31065785	chr1:30933079-31065785	1	-	30933210	31065785	0	20	263,193,122,126,138,129,130,268,237,297,144,139,152,105,94,271,167,69,374,97,	0,3563,8071,8918,12266,17053,19154,20634,31594,32902,34087,35274,41571,46982,48232,59310,61974,95716,126124,132609,
#Partially deleted in new
chr1	30933304	30945372	chr1:30933304-30945372	0	-	30941270	30945372	789624	5	38,193,122,202,27,	0,3338,7846,8617,12041,
#Partially deleted in new
chr1	30936721	30953757	chr1:30936721-30953757	0	-	30936721	30953757	789624	6	114,122,138,135,130,44,	0,4429,8624,13405,15512,16992,
#Partially deleted in new
chr1	30936723	30953744	chr1:30936723-30953744	0	-	30936723	30953744	789624	6	112,122,126,129,130,31,	0,4427,5274,13409,15510,16990,
#Partially deleted in new
chr1	30945400	30964872	chr1:30945400-30964872	0	-	30953744	30964872	789624	5	83,135,130,105,199,	0,4726,6833,8313,19273,
#Deleted in new
chr1	30964887	30966380	chr1:30964887-30966380	0	-	30964887	30964887	8553170	2	23,399,	0,1094,
#Partially deleted in new
chr1	30966015	30974859	chr1:30966015-30974859	0	-	30966015	30966015	8553170	4	263,144,196,209,	0,1151,2281,8635,
#Partially deleted in new
chr1	30966146	30980133	chr1:30966146-30980133	0	-	30966146	30966146	8553170	5	132,212,139,152,72,	0,952,2207,8504,13915,
#Partially deleted in new
chr1	30967224	30995104	chr1:30967224-30995104	0	-	30967224	30995104	789624	6	86,139,152,94,271,51,	0,1129,7426,14087,25165,27829,
#Partially deleted in new
chr1	30974648	30982145	chr1:30974648-30982145	0	-	30974648	30974648	8553170	4	154,102,94,229,	0,5413,6663,7268,
#Partially deleted in new
chr1	30981337	31065676	chr1:30981337-31065676	0	-	31028847	31059566	789624	5	68,109,69,279,61,	0,25656,47458,77961,84278,
#Partially deleted in new
chr1	30992440	31065695	chr1:30992440-31065695	0	-	31028847	31059566	789624	7	220,167,179,109,69,279,80,	0,2613,13412,14553,36355,66858,73175,
#Partially deleted in new
chr1	30995181	31065683	chr1:30995181-31065683	0	-	31055368	31059566	789624	7	39,179,109,69,68,374,68,	0,10671,11812,33614,60131,64022,70434,
#Partially deleted in new
chr1	31028757	31065695	chr1:31028757-31065695	0	-	31028757	31028757	8553170	3	107,374,80,	0,30446,36858,
#Deleted in new
chr1	31036733	31037240	chr1:31036733-31037240	7	+	31036733	31036733	16724991	1	507,	0,
#Partially deleted in new
chr1	31050871	31051034	chr1:31050871-31051034	7	+	31050871	31050871	16724991	1	163,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	31059278	31061916	chr1:31059278-31061916	0	-	31059278	31059566	789624	2	299,250,	0,2388,
#Partially deleted in new
chr1	31094986	31095558	chr1:31094986-31095558	7	-	31094986	31094986	16724991	2	174,78,	0,494,
#Partially deleted in new
chr1	31108187	31108623	chr1:31108187-31108623	7	-	31108187	31108187	16724991	1	436,	0,
#Partially deleted in new
chr1	31179744	31239554	chr1:31179744-31239554	3	-	31181702	31239547	789624	7	1968,82,61,198,81,138,61,	0,2115,2785,4072,5502,8305,59749,
#Deleted in new
chr1	31180539	31181676	chr1:31180539-31181676	0	-	31180539	31180539	8553170	2	147,438,	0,699,
#Partially deleted in new
chr1	31181588	31188153	chr1:31181588-31188153	0	-	31181702	31188153	789624	5	124,82,61,198,104,	0,271,941,2228,6461,
#Partially deleted in new
chr1	31182550	31193920	chr1:31182550-31193920	0	-	31182550	31188109	789624	5	40,198,81,138,105,	0,1266,2696,5499,11265,
#Partially deleted in new
chr1	31185162	31188396	chr1:31185162-31188396	0	-	31185162	31185162	8553170	2	165,347,	0,2887,
#Partially deleted in new
chr1	31259567	31296770	chr1:31259567-31296770	3	-	31260071	31296751	0	10	554,104,62,83,121,123,166,94,130,160,	0,1961,8303,9590,11811,21806,29686,32345,33651,37043,
#Partially deleted in new
chr1	31259672	31261822	chr1:31259672-31261822	0	-	31259672	31259672	8553170	2	449,294,	0,1856,
#Partially deleted in new
chr1	31259673	31282483	chr1:31259673-31282483	0	-	31259673	31259673	8553170	6	448,104,62,83,121,1110,	0,1855,8197,9484,11705,21700,
#Partially deleted in new
chr1	31259709	31269666	chr1:31259709-31269666	1	-	31260071	31269325	789624	4	412,104,62,509,	0,1819,8161,9448,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	31259785	31261077	chr1:31259785-31261077	0	-	31259785	31259785	8553170	2	336,123,	0,1169,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	31263244	31263681	chr1:31263244-31263681	7	-	31263244	31263244	16724991	1	437,	0,
#Partially deleted in new
chr1	31271207	31289419	chr1:31271207-31289419	0	-	31271207	31271207	8553170	3	292,123,166,	0,10166,18046,
#Partially deleted in new
chr1	31292843	31296782	chr1:31292843-31296782	0	-	31292843	31292843	8553170	2	505,172,	0,3767,
#Partially deleted in new
chr1	31296981	31364953	chr1:31296981-31364953	1	+	31318194	31364193	0	9	94,121,70,58,101,92,101,146,922,	0,13062,21185,22127,40193,41975,49658,51847,67050,
#Partially deleted in new
chr1	31296981	31364953	chr1:31296981-31364953	1	+	31297081	31364193	789624	7	232,58,101,92,101,146,922,	0,22127,40193,41975,49658,51847,67050,
#Partially deleted in new
chr1	31296981	31364953	chr1:31296981-31364953	1	+	31319127	31364193	789624	7	94,121,58,92,101,146,922,	0,13062,22127,41975,49658,51847,67050,
#Partially deleted in new
chr1	31296981	31364953	chr1:31296981-31364953	1	+	31318194	31364221	789624	7	94,121,70,58,101,92,922,	0,13062,21185,22127,40193,41975,67050,
#Partially deleted in new
chr1	31296981	31364953	chr1:31296981-31364953	1	+	31310098	31364054	789624	7	94,121,58,101,92,101,922,	0,13062,22127,40193,41975,49658,67050,
#Partially deleted in new
chr1	31296994	31364936	chr1:31296994-31364936	3	+	31310098	31364193	0	8	81,121,58,101,92,101,146,905,	0,13049,22114,40180,41962,49645,51834,67037,
#Partially deleted in new
chr1	31296997	31348968	chr1:31296997-31348968	0	+	31296997	31296997	8553170	8	78,121,70,58,101,92,101,140,	0,13046,21169,22111,40177,41959,49642,51831,
#Partially deleted in new
chr1	31297007	31364936	chr1:31297007-31364936	1	+	31310098	31364193	0	8	206,121,58,101,92,101,146,905,	0,13036,22101,40167,41949,49632,51821,67024,
#Partially deleted in new
chr1	31297035	31364552	chr1:31297035-31364552	1	+	31319114	31364193	789624	7	61,58,101,92,179,146,521,	0,22073,40139,41921,49604,51793,66996,
#Partially deleted in new
chr1	31333066	31346799	chr1:31333066-31346799	3	-	31333066	31333066	8553170	3	116,101,222,	0,4035,13511,
#Partially deleted in new
chr1	31365624	31373076	chr1:31365624-31373076	3	-	31365885	31373014	0	4	315,102,173,135,	0,1768,3760,7317,
#Deleted in new
chr1	31365712	31369590	chr1:31365712-31369590	0	-	31365712	31365712	8553170	3	227,102,206,	0,1680,3672,
#Partially deleted in new
chr1	31365720	31373073	chr1:31365720-31373073	0	-	31369112	31373014	789624	5	219,102,67,173,132,	0,1672,3349,3664,7221,
#Partially deleted in new
chr1	31365890	31376850	chr1:31365890-31376850	0	-	31365890	31373014	789624	6	49,102,173,100,72,129,	0,1502,3494,7051,10465,10831,
#Partially deleted in new
chr1	31409564	31434677	chr1:31409564-31434677	1	+	31409837	31434199	789624	11	288,51,162,191,80,138,170,91,142,219,614,	0,820,14128,15118,15765,16211,17089,19413,19832,23402,24499,
#Partially deleted in new
chr1	31410173	31434680	chr1:31410173-31434680	1	+	31410384	31434199	789624	10	262,162,191,80,138,170,91,142,219,617,	0,13519,14509,15156,15602,16480,18804,19223,22793,23890,
#Partially deleted in new
chr1	31410216	31425858	chr1:31410216-31425858	0	+	31410216	31410216	8553170	5	219,162,191,80,83,	0,13476,14466,15113,15559,
#Partially deleted in new
chr1	31413115	31434678	chr1:31413115-31434678	3	+	31413265	31434199	789624	10	189,162,191,80,138,170,91,142,219,615,	0,10577,11567,12214,12660,13538,15862,16281,19851,20948,
#Partially deleted in new
chr1	31413812	31434677	chr1:31413812-31434677	0	+	31413812	31413812	8553170	11	965,35,162,191,80,138,170,91,142,219,614,	0,2060,9880,10870,11517,11963,12841,15165,15584,19154,20251,
#Partially deleted in new
chr1	31413812	31434680	chr1:31413812-31434680	1	+	31414013	31434199	789624	10	252,162,191,80,138,170,91,142,219,617,	0,9880,10870,11517,11963,12841,15165,15584,19154,20251,
#Deleted in new
chr1	31487588	31488930	chr1:31487588-31488930	7	-	31487588	31487588	16724991	1	1342,	0,
#Partially deleted in new
chr1	31500084	31508566	chr1:31500084-31508566	7	+	31500084	31500084	16724991	8	303,187,174,173,110,167,148,851,	0,1268,2930,4043,5393,6155,7349,7631,
#Partially deleted in new
chr1	31501398	31509648	chr1:31501398-31509648	5	+	31501398	31501398	16724991	9	129,174,173,110,167,148,101,217,25,	0,1616,2729,4079,4841,6035,6317,7665,8225,
#Partially deleted in new
chr1	31506200	31508219	chr1:31506200-31508219	4	+	31506200	31506200	16724991	2	206,924,	0,1095,
#Partially deleted in new
chr1	31506214	31508219	chr1:31506214-31508219	4	+	31506214	31506214	16724991	3	192,148,504,	0,1219,1501,
#Partially deleted in new
chr1	31506225	31583247	chr1:31506225-31583247	0	+	31506225	31506225	8553170	5	181,55,141,78,99,	0,1070,30043,34582,76923,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	31506274	31583306	chr1:31506274-31583306	0	+	31506274	31506274	8553170	4	132,138,123,158,	0,29997,45260,76874,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	31506280	31540663	chr1:31506280-31540663	0	+	31506280	31506280	8553170	3	126,295,87,	0,29988,34296,
#Partially deleted in new
chr1	31506284	31522358	chr1:31506284-31522358	0	+	31506284	31506284	8553170	3	122,118,334,	0,14661,15740,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	31506295	31508565	chr1:31506295-31508565	4	+	31506295	31506295	16724991	1	2270,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	31518355	31526444	chr1:31518355-31526444	3	+	31518355	31518355	5263520	3	481,118,4420,	0,2590,3669,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	31522205	31568280	chr1:31522205-31568280	0	+	31522205	31522205	8553170	5	31,138,123,134,115,	0,14066,29329,30224,45960,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	31522362	31523589	chr1:31522362-31523589	0	+	31522362	31522362	8553170	2	363,759,	0,468,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	31538043	31540769	chr1:31538043-31540769	0	+	31538043	31538043	8553170	3	43,118,193,	0,931,2533,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	31540380	31543987	chr1:31540380-31543987	0	+	31540380	31540380	8553170	1	3607,	0,
#Partially deleted in new
chr1	31571584	31575573	chr1:31571584-31575573	3	-	31571584	31571584	8553170	3	158,269,164,	0,450,3825,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	31576484	31587682	chr1:31576484-31587682	1	+	31577148	31586979	789624	11	111,325,64,115,124,151,190,46,124,46,844,	0,649,2719,6976,8193,8401,8666,8955,9268,10225,10354,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	31576534	31587686	chr1:31576534-31587686	3	+	31577148	31586979	789624	12	61,325,64,93,115,124,151,190,46,124,46,848,	0,599,2669,6614,6926,8143,8351,8616,8905,9218,10175,10304,
#Partially deleted in new
chr1	31576541	31585036	chr1:31576541-31585036	0	+	31576541	31576541	8553170	5	54,64,427,124,151,	0,2662,6607,8136,8344,
#Deleted in new
chr1	31576544	31577762	chr1:31576544-31577762	0	+	31576544	31576544	8553170	2	51,629,	0,589,
#Partially deleted in new
chr1	31576567	31585340	chr1:31576567-31585340	0	+	31576567	31576567	8553170	7	28,64,93,115,124,151,190,	0,2636,6581,6893,8110,8318,8583,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	31577033	31587684	chr1:31577033-31587684	0	+	31577033	31577033	8553170	6	425,64,1653,455,1316,846,	0,2170,6115,7852,8406,9805,
#Partially deleted in new
chr1	31578144	31585485	chr1:31578144-31585485	0	+	31578144	31578144	8553170	8	44,64,93,115,124,151,190,46,	0,1059,5004,5316,6533,6741,7006,7295,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	31578144	31587682	chr1:31578144-31587682	1	+	31579208	31586979	789624	11	44,64,93,115,124,151,190,46,124,46,844,	0,1059,5004,5316,6533,6741,7006,7295,7608,8565,8694,
#Partially deleted in new
chr1	31579752	31585876	chr1:31579752-31585876	0	+	31579752	31579752	8553170	8	61,93,115,124,151,190,46,124,	0,3396,3708,4925,5133,5398,5687,6000,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	31583512	31587686	chr1:31583512-31587686	0	+	31583512	31583512	8553170	5	1289,455,437,46,848,	0,1373,1927,3197,3326,
#Deleted in new
chr1	31585150	31586442	chr1:31585150-31586442	0	+	31585150	31585150	8553170	3	190,46,690,	0,289,602,
#Partially deleted in new
chr1	31617685	31627613	chr1:31617685-31627613	0	+	31617685	31617685	8553170	9	196,106,61,341,244,116,227,122,291,	0,335,1070,1365,3157,3791,5837,7311,9637,
#Partially deleted in new
chr1	31617685	31623749	chr1:31617685-31623749	0	+	31617685	31617685	8553170	6	196,102,61,244,116,227,	0,339,1070,3157,3791,5837,
#Partially deleted in new
chr1	31617699	31627318	chr1:31617699-31627318	3	+	31619192	31626980	0	8	215,371,179,244,116,227,122,529,	0,1321,1832,3143,3777,5823,7297,9090,
#Partially deleted in new
chr1	31619039	31627191	chr1:31619039-31627191	1	+	31619192	31626980	0	7	352,179,244,116,227,122,402,	0,492,1803,2437,4483,5957,7750,
#Partially deleted in new
chr1	31619192	31632518	chr1:31619192-31632518	1	+	31619192	31632518	789624	7	199,179,244,116,227,122,83,	0,339,1650,2284,4330,5804,13243,
#Partially deleted in new
chr1	31629861	31644887	chr1:31629861-31644887	3	-	31630612	31644864	789624	5	981,144,156,301,47,	0,2633,3297,5360,14979,
#Partially deleted in new
chr1	31630339	31635260	chr1:31630339-31635260	0	-	31630339	31630339	8553170	4	393,144,156,39,	0,2155,2819,4882,
#Partially deleted in new
chr1	31630448	31644896	chr1:31630448-31644896	0	-	31630448	31630448	8553170	4	394,144,156,56,	0,2046,2710,14392,
#Partially deleted in new
chr1	31630788	31644589	chr1:31630788-31644589	0	-	31630788	31630788	5263520	5	54,144,156,301,210,	0,1706,2370,4433,13591,
#Partially deleted in new
chr1	31633158	31644601	chr1:31633158-31644601	0	-	31633158	31633158	8553170	3	156,301,479,	0,2063,10964,
#Partially deleted in new
chr1	31633239	31644555	chr1:31633239-31644555	0	-	31633239	31633239	8553170	3	75,301,366,	0,1982,10950,
#Partially deleted in new
chr1	31633263	31644596	chr1:31633263-31644596	0	-	31633263	31633263	8553170	3	51,301,335,	0,1958,10998,
#Partially deleted in new
chr1	31633274	31635472	chr1:31633274-31635472	0	-	31633274	31633274	8553170	3	40,110,251,	0,1559,1947,
#Partially deleted in new
chr1	31644048	31659904	chr1:31644048-31659904	0	+	31644048	31644048	8553170	4	248,140,234,207,	0,7800,11903,15649,
#Partially deleted in new
chr1	31644048	31659904	chr1:31644048-31659904	0	+	31644048	31644048	8553170	4	248,140,165,207,	0,7800,12848,15649,
#Partially deleted in new
chr1	31644048	31659776	chr1:31644048-31659776	3	+	31644048	31644048	8553170	6	248,140,134,134,165,79,	0,7800,8062,11862,12848,15649,
#Partially deleted in new
chr1	31644048	31659746	chr1:31644048-31659746	1	+	31644048	31644048	8553170	5	248,140,93,165,49,	0,7800,11903,12848,15649,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	31644693	31649371	chr1:31644693-31649371	3	+	31644693	31644693	8553170	2	153,327,	0,4351,
#Partially deleted in new
chr1	31644759	31659904	chr1:31644759-31659904	0	+	31644759	31644759	8553170	4	87,140,165,207,	0,7089,12137,14938,
#Partially deleted in new
chr1	31644828	31659904	chr1:31644828-31659904	0	+	31644828	31644828	8553170	5	18,140,93,165,251,	0,7020,11123,12068,14825,
#Partially deleted in new
chr1	31644988	31659782	chr1:31644988-31659782	1	+	31644988	31644988	8553170	5	132,140,134,165,129,	0,6860,10922,11908,14665,
#Partially deleted in new
chr1	31645010	31659816	chr1:31645010-31659816	1	+	31645010	31645010	8553170	4	110,140,165,163,	0,6838,11886,14643,
#Partially deleted in new
chr1	31645016	31659904	chr1:31645016-31659904	0	+	31645016	31645016	8553170	4	130,140,165,251,	0,6832,11880,14637,
#Partially deleted in new
chr1	31645035	31659904	chr1:31645035-31659904	0	+	31645035	31645035	8553170	4	111,140,165,207,	0,6813,11861,14662,
#Partially deleted in new
chr1	31645048	31659904	chr1:31645048-31659904	0	+	31645048	31645048	8553170	5	98,140,93,165,251,	0,6800,10903,11848,14605,
#Partially deleted in new
chr1	31645048	31659904	chr1:31645048-31659904	0	+	31645048	31645048	8553170	5	90,140,93,165,207,	0,6800,10903,11848,14649,
#Partially deleted in new
chr1	31645252	31659929	chr1:31645252-31659929	0	+	31645252	31645252	8553170	5	130,140,134,165,276,	0,6596,10658,11644,14401,
#Partially deleted in new
chr1	31645262	31659926	chr1:31645262-31659926	0	+	31645262	31645262	8553170	5	120,140,93,165,273,	0,6586,10689,11634,14391,
#Partially deleted in new
chr1	31645262	31659851	chr1:31645262-31659851	1	+	31645262	31645262	8553170	5	120,140,234,165,154,	0,6586,10689,11634,14435,
#Partially deleted in new
chr1	31645287	31659929	chr1:31645287-31659929	0	+	31645287	31645287	8553170	4	95,140,165,276,	0,6561,11609,14366,
#Partially deleted in new
chr1	31645287	31659904	chr1:31645287-31659904	0	+	31645287	31645287	8553170	4	54,140,165,251,	0,6561,11609,14366,
#Partially deleted in new
chr1	31645295	31659926	chr1:31645295-31659926	0	+	31645295	31645295	8553170	5	87,140,93,165,229,	0,6553,10656,11601,14402,
#Partially deleted in new
chr1	31645295	31659864	chr1:31645295-31659864	0	+	31645295	31645295	8553170	5	87,140,134,165,167,	0,6553,10615,11601,14402,
#Partially deleted in new
chr1	31645318	31659928	chr1:31645318-31659928	0	+	31645318	31645318	8553170	6	64,140,135,93,165,275,	0,6530,8121,10633,11578,14335,
#Partially deleted in new
chr1	31645321	31659904	chr1:31645321-31659904	0	+	31645321	31645321	8553170	4	61,140,165,207,	0,6527,11575,14376,
#Boundary problem: need 71, got 0, diff 71, mapped 0.0
chr1	31652246	31704319	chr1:31652246-31704319	3	-	31652650	31702193	789624	71	607,78,177,67,189,45,36,90,51,54,54,45,45,54,72,63,36,54,45,54,54,54,45,45,87,42,117,33,54,54,48,60,27,45,69,54,36,42,54,123,108,36,132,45,36,36,111,36,111,27,45,39,96,45,63,36,45,42,63,27,36,27,54,126,81,267,124,118,75,107,483,	0,1352,1620,2545,3067,4153,4786,6241,6667,8338,8819,9167,9413,10087,10340,12925,13336,13635,13790,15328,15918,16555,18355,19368,20169,20349,20477,22760,23011,27385,27557,27795,28658,28776,30687,30947,31087,31460,31703,31862,32276,32574,33392,33844,33997,36220,36614,36803,37494,38120,38282,38941,39170,39351,39758,40227,40351,40520,40845,41897,42939,43514,43841,44716,44973,45659,46236,47566,47794,49874,51590,
#Partially deleted in new
chr1	31652510	31670602	chr1:31652510-31670602	0	-	31652510	31652510	8553170	23	343,78,177,67,189,347,36,90,51,54,54,45,45,54,72,63,36,54,45,54,54,54,792,	0,1088,1356,2281,2803,3587,4522,5977,6403,8074,8555,8903,9149,9823,10076,12661,13072,13371,13526,15064,15654,16291,17300,
#Partially deleted in new
chr1	31652587	31663456	chr1:31652587-31663456	0	-	31652587	31652587	8553170	15	266,78,177,67,189,347,36,90,51,54,54,45,45,54,870,	0,1011,1279,2204,2726,3510,4445,5900,6326,7997,8478,8826,9072,9746,9999,
#Partially deleted in new
chr1	31653603	31655848	chr1:31653603-31655848	0	-	31653603	31653603	8553170	4	73,177,67,535,	0,263,1188,1710,
#Partially deleted in new
chr1	31656108	31659938	chr1:31656108-31659938	1	+	31656108	31656108	8553170	2	77,285,	0,3545,
#Partially deleted in new
chr1	31656131	31660162	chr1:31656131-31660162	0	+	31656131	31656131	8553170	3	54,165,509,	0,765,3522,
#Partially deleted in new
chr1	31656399	31666081	chr1:31656399-31666081	0	-	31656399	31666081	789624	13	45,36,90,51,54,54,45,45,54,63,36,54,45,	0,633,2088,2514,4185,4666,5014,5260,5934,8772,9183,9482,9637,
#Partially deleted in new
chr1	31657257	31659929	chr1:31657257-31659929	0	+	31657257	31657257	8553170	2	235,276,	0,2396,
#Deleted in new
chr1	31660584	31661760	chr1:31660584-31661760	0	-	31660584	31660584	8553170	4	54,54,45,101,	0,481,829,1075,
#Deleted in new
chr1	31660584	31666385	chr1:31660584-31666385	0	-	31660584	31660584	8553170	10	54,54,45,45,54,72,63,36,54,349,	0,481,829,1075,1749,2002,4587,4998,5297,5452,
#Deleted in new
chr1	31660587	31666159	chr1:31660587-31666159	0	-	31660587	31660587	8553170	10	51,54,45,45,54,72,63,115,54,123,	0,478,826,1072,1746,1999,4584,4916,5294,5449,
#Deleted in new
chr1	31666036	31673152	chr1:31666036-31673152	0	-	31666036	31666036	8553170	9	45,54,54,54,45,87,42,117,122,	0,1538,2128,2765,5578,6379,6559,6687,6994,
#Deleted in new
chr1	31667581	31673226	chr1:31667581-31673226	0	-	31667581	31667581	8553170	9	47,54,54,91,45,87,42,117,203,	0,583,1220,2974,4033,4834,5014,5142,5442,
#Partially deleted in new
chr1	31672429	31683748	chr1:31672429-31683748	0	-	31672429	31683748	789624	13	73,42,117,33,54,54,60,27,45,69,54,36,42,	0,166,294,2577,2828,7202,7612,8475,8593,10504,10764,10904,11277,
#Partially deleted in new
chr1	31679229	31704319	chr1:31679229-31704319	1	-	31679454	31702193	789624	41	456,60,27,45,69,54,36,42,54,123,108,36,132,45,36,36,111,36,111,27,45,39,96,45,63,36,45,42,63,27,36,27,54,126,81,267,124,118,75,107,483,	0,812,1675,1793,3704,3964,4104,4477,4720,4879,5293,5591,6409,6861,7014,9237,9631,9820,10511,11137,11299,11958,12187,12368,12775,13244,13368,13537,13862,14914,15956,16531,16858,17733,17990,18676,19253,20583,20811,22891,24607,
#Partially deleted in new
chr1	31683707	31689501	chr1:31683707-31689501	0	-	31683707	31683707	8553170	11	41,54,108,36,132,45,36,36,111,36,41,	0,242,815,1113,1931,2383,2536,4759,5153,5342,5753,
#Partially deleted in new
chr1	31684109	31689567	chr1:31684109-31689567	0	-	31684109	31684109	8553170	11	122,108,36,132,45,36,36,111,36,28,107,	0,413,711,1529,1981,2134,4357,4751,4940,5222,5351,
#Partially deleted in new
chr1	31685681	31689968	chr1:31685681-31689968	0	-	31685681	31685681	8553170	7	89,45,36,36,111,36,228,	0,409,562,2785,3179,3368,4059,
#Deleted in new
chr1	31688860	31697010	chr1:31688860-31697010	0	-	31688860	31697010	789624	17	111,36,111,27,45,39,96,45,63,36,45,42,63,36,27,54,48,	0,189,880,1506,1668,2327,2556,2737,3144,3613,3737,3906,4231,6325,6900,7227,8102,
#Partially deleted in new
chr1	31698489	31704060	chr1:31698489-31704060	0	-	31698489	31698489	8553170	4	117,118,75,224,	0,1323,1551,5347,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr1	31727116	31764035	chr1:31727116-31764035	3	-	31727419	31757221	789624	33	489,57,96,36,620,40,96,172,99,86,67,70,151,103,104,127,44,106,328,109,69,195,107,102,168,165,165,165,84,817,81,130,152,	0,908,1065,1481,3683,4998,5400,5855,8066,8463,8710,9204,9456,10312,10535,11083,11470,11715,12191,12809,12993,13230,14256,14507,14683,14936,15721,17076,17531,28882,30084,30265,36767,
#Partially deleted in new
chr1	31727116	31764340	chr1:31727116-31764340	1	-	31727419	31756800	789624	28	489,99,36,620,40,96,172,86,67,70,151,103,104,127,44,106,328,109,69,195,107,102,168,165,165,84,817,457,	0,1065,1481,3683,4998,5400,5855,8463,8710,9204,9456,10312,10535,11083,11470,11715,12191,12809,12993,13230,14256,14507,14683,14936,17076,17531,28882,36767,
#Partially deleted in new
chr1	31727116	31763922	chr1:31727116-31763922	1	-	31727419	31756800	789624	29	489,99,36,620,40,96,172,99,86,67,70,151,103,104,127,44,106,328,109,69,195,107,102,168,165,165,84,817,39,	0,1065,1481,3683,4998,5400,5855,8066,8463,8710,9204,9456,10312,10535,11083,11470,11715,12191,12809,12993,13230,14256,14507,14683,14936,15721,17531,28882,36767,
#Partially deleted in new
chr1	31727116	31759423	chr1:31727116-31759423	1	-	31727419	31759350	789624	29	489,57,99,36,620,40,96,172,86,67,70,151,103,104,127,44,106,328,109,69,195,107,102,168,165,165,84,817,103,	0,908,1065,1481,3683,4998,5400,5855,8463,8710,9204,9456,10312,10535,11083,11470,11715,12191,12809,12993,13230,14256,14507,14683,14936,15721,17531,28882,32204,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr1	31727117	31764047	chr1:31727117-31764047	1	-	31727419	31757221	789624	33	488,57,99,36,620,40,96,172,99,86,67,70,151,103,104,127,44,106,328,109,69,195,107,102,168,165,165,165,84,817,81,130,164,	0,907,1064,1480,3682,4997,5399,5854,8065,8462,8709,9203,9455,10311,10534,11082,11469,11714,12190,12808,12992,13229,14255,14506,14682,14935,15720,17075,17530,28881,30083,30264,36766,
#Partially deleted in new
chr1	31727117	31736679	chr1:31727117-31736679	0	-	31727117	31727117	8553170	10	964,99,36,620,40,96,172,483,67,359,	0,1064,1480,3682,4997,5399,5854,8065,8709,9203,
#Partially deleted in new
chr1	31727169	31735347	chr1:31727169-31735347	0	-	31727169	31727169	8553170	9	436,57,96,36,620,40,96,172,165,	0,855,1012,1428,3630,4945,5347,5802,8013,
#Partially deleted in new
chr1	31727194	31757259	chr1:31727194-31757259	1	-	31727419	31757221	789624	30	411,57,96,36,620,40,96,172,86,67,70,151,103,104,127,44,106,328,109,69,195,107,102,168,165,165,165,84,817,59,	0,830,987,1403,3605,4920,5322,5777,8385,8632,9126,9378,10234,10457,11005,11392,11637,12113,12731,12915,13152,14178,14429,14605,14858,15643,16998,17453,28804,30006,
#Partially deleted in new
chr1	31727410	31756801	chr1:31727410-31756801	1	-	31727419	31756800	789624	29	195,99,36,620,40,96,172,99,86,67,70,151,103,104,127,44,106,328,109,69,195,107,102,168,165,165,165,84,803,	0,771,1187,3389,4704,5106,5561,7772,8169,8416,8910,9162,10018,10241,10789,11176,11421,11897,12515,12699,12936,13962,14213,14389,14642,15427,16782,17237,28588,
#Deleted in new
chr1	31738199	31739210	chr1:31738199-31739210	0	-	31738199	31738199	8553170	3	127,44,379,	0,387,632,
#Partially deleted in new
chr1	31738244	31756815	chr1:31738244-31756815	0	-	31738244	31756815	789624	14	82,44,106,328,109,69,195,107,102,168,165,165,84,817,	0,342,587,1063,1681,1865,2102,3128,3379,3555,3808,5948,6403,17754,
#Partially deleted in new
chr1	31739514	31756264	chr1:31739514-31756264	0	-	31739514	31739514	8553170	8	121,109,102,168,165,165,84,266,	0,411,2109,2285,2538,3323,5133,16484,
#Partially deleted in new
chr1	31741799	31764893	chr1:31741799-31764893	0	-	31741799	31764802	789624	6	168,165,165,84,817,214,	0,253,1038,2848,14199,22880,
#Deleted in new
chr1	31742107	31743673	chr1:31742107-31743673	0	-	31742107	31742107	8553170	3	110,165,215,	0,730,1351,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	31757216	31761026	chr1:31757216-31761026	0	-	31757216	31757221	8553170	3	65,130,344,	0,165,3466,
#Deleted in new
chr1	31758659	31758735	chr1:31758659-31758735	3	-	31758659	31758659	5263520	1	76,	0,
#Deleted in new
chr1	31789129	31791322	chr1:31789129-31791322	3	+	31789129	31789129	8553170	2	355,182,	0,2011,
#Partially deleted in new
chr1	31790421	31816022	chr1:31790421-31816022	1	-	31790602	31800521	789624	15	831,187,90,151,151,112,126,117,160,85,55,126,177,42,62,	0,1793,2256,2856,3325,3702,6168,7785,8020,8979,9387,9594,10019,11242,25539,
#Partially deleted in new
chr1	31790423	31816051	chr1:31790423-31816051	3	-	31790602	31815333	789624	16	868,187,90,151,151,112,126,117,160,85,55,126,177,42,1422,91,	0,1791,2254,2854,3323,3700,6166,7783,8018,8977,9385,9592,10017,11240,23527,25537,
#Partially deleted in new
chr1	31790427	31798615	chr1:31790427-31798615	0	-	31790427	31790427	8553170	6	825,90,620,112,117,174,	0,2250,2850,3696,7779,8014,
#Partially deleted in new
chr1	31790476	31798839	chr1:31790476-31798839	1	-	31790602	31798780	789624	9	776,187,90,151,151,112,123,117,398,	0,1738,2201,2801,3270,3647,6116,7730,7965,
#Partially deleted in new
chr1	31790482	31815375	chr1:31790482-31815375	1	-	31790602	31815333	789624	15	770,187,90,151,151,112,126,117,160,85,55,126,177,42,1425,	0,1732,2195,2795,3264,3641,6107,7724,7959,8918,9326,9533,9958,11181,23468,
#Partially deleted in new
chr1	31793318	31798716	chr1:31793318-31798716	0	-	31793318	31798716	789624	5	110,151,112,117,275,	0,428,805,4888,5123,
#Partially deleted in new
chr1	31794017	31798631	chr1:31794017-31798631	0	-	31794017	31794017	8553170	3	218,117,190,	0,4189,4424,
#Partially deleted in new
chr1	31794226	31799892	chr1:31794226-31799892	0	-	31794226	31794226	8553170	6	9,126,117,160,85,84,	0,2363,3980,4215,5174,5582,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	31794495	31798771	chr1:31794495-31798771	0	-	31794495	31794495	8553170	3	2220,117,330,	0,3711,3946,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	31794515	31798631	chr1:31794515-31798631	0	-	31794515	31794515	8553170	2	2200,425,	0,3691,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	31794515	31814129	chr1:31794515-31814129	0	-	31794515	31794515	8553170	7	2200,117,160,55,126,42,179,	0,3691,3926,5293,5500,7148,19435,
#Partially deleted in new
chr1	31799401	31816002	chr1:31799401-31816002	0	-	31799401	31799854	789624	5	84,55,126,39,259,	0,407,614,2262,16342,
#Partially deleted in new
chr1	31799808	31816022	chr1:31799808-31816022	0	-	31799808	31800521	789624	6	55,126,177,42,25,62,	0,207,632,1855,15539,16152,
#Partially deleted in new
chr1	31800459	31816020	chr1:31800459-31816020	0	-	31800459	31800521	789624	3	158,42,277,	0,1204,15284,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	31842018	31855568	chr1:31842018-31855568	3	-	31842018	31842018	8553170	2	2129,128,	0,13422,
#Partially deleted in new
chr1	31906420	31919483	chr1:31906420-31919483	1	-	31908851	31919065	0	5	2540,75,131,93,514,	0,3617,5275,9474,12549,
#Partially deleted in new
chr1	31906420	31938379	chr1:31906420-31938379	3	-	31908851	31919065	0	6	2540,75,131,93,689,393,	0,3617,5275,9474,12549,31566,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	31908262	31937775	chr1:31908262-31937775	1	-	31908851	31919065	8553170	8	698,75,131,93,689,296,210,21,	0,1775,3433,7632,10707,21776,22670,29492,
#Partially deleted in new
chr1	31908533	31919368	chr1:31908533-31919368	1	-	31908851	31919065	0	4	427,75,131,399,	0,1504,3162,10436,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	31908652	31911280	chr1:31908652-31911280	0	-	31908652	31908652	8553170	2	308,1243,	0,1385,
#Partially deleted in new
chr1	31908657	31919109	chr1:31908657-31919109	1	-	31908851	31919065	0	4	303,131,93,140,	0,3038,7237,10312,
#Partially deleted in new
chr1	31908707	31919123	chr1:31908707-31919123	1	-	31910079	31919065	789624	4	253,75,93,154,	0,1330,7187,10262,
#Partially deleted in new
chr1	31908838	31919359	chr1:31908838-31919359	0	-	31913831	31919065	789624	7	122,75,131,43,57,93,390,	0,1199,2857,4142,4948,7056,10131,
#Partially deleted in new
chr1	31910068	31919464	chr1:31910068-31919464	0	-	31913002	31919065	789624	5	44,131,43,93,495,	0,1627,2912,5826,8901,
#Partially deleted in new
chr1	31913002	31919470	chr1:31913002-31919470	1	-	31913002	31919065	789624	3	21,93,501,	0,2892,5967,
#Partially deleted in new
chr1	31913831	31919470	chr1:31913831-31919470	1	-	31913831	31919065	789624	3	12,93,501,	0,2063,5138,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	31915539	31919172	chr1:31915539-31919172	0	-	31915539	31915539	8553170	2	448,203,	0,3430,
#Partially deleted in new
chr1	31915894	31942576	chr1:31915894-31942576	0	-	31915894	31919065	789624	3	93,689,48,	0,3075,26634,
#Partially deleted in new
chr1	31918999	31937785	chr1:31918999-31937785	0	-	31918999	31919065	789624	3	659,210,31,	0,11933,18755,
#Partially deleted in new
chr1	31919093	31937886	chr1:31919093-31937886	0	-	31919093	31919093	8553170	2	565,45,	0,18748,
#Partially deleted in new
chr1	31919129	31944856	chr1:31919129-31944856	0	-	31919129	31919129	8553170	2	529,264,	0,25463,
#Partially deleted in new
chr1	31919228	31937800	chr1:31919228-31937800	0	-	31919228	31919228	8553170	3	430,210,23,	0,11704,18549,
#Partially deleted in new
chr1	31919243	31937818	chr1:31919243-31937818	0	-	31919243	31919243	8553170	2	415,41,	0,18534,
#Partially deleted in new
chr1	31919246	31938042	chr1:31919246-31938042	0	-	31919246	31919246	8553170	3	412,210,56,	0,11686,18740,
#Partially deleted in new
chr1	31919259	31938358	chr1:31919259-31938358	0	-	31919259	31919259	8553170	3	399,73,96,	0,18727,19003,
#Partially deleted in new
chr1	31919423	31938186	chr1:31919423-31938186	0	-	31919423	31919423	8553170	3	235,73,68,	0,18563,18695,
#Partially deleted in new
chr1	31919568	31937782	chr1:31919568-31937782	0	-	31919568	31919568	8553170	5	90,148,29,71,28,	0,4449,13103,16020,18186,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	31933019	31933975	chr1:31933019-31933975	3	+	31933019	31933019	8553170	2	191,326,	0,630,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	31972188	31987034	chr1:31972188-31987034	3	-	31972188	31972188	8553170	2	1690,183,	0,14663,
#Partially deleted in new
chr1	32013828	32043882	chr1:32013828-32043882	3	+	32013995	32042624	0	9	549,125,117,147,134,202,68,59,1356,	0,16469,17695,19359,23081,24006,24723,25686,28698,
#Partially deleted in new
chr1	32013925	32043877	chr1:32013925-32043877	0	+	32013925	32013925	789624	9	452,125,117,147,134,285,68,59,1351,	0,16372,17598,19262,22984,23909,24626,25589,28601,
#Partially deleted in new
chr1	32013995	32042624	chr1:32013995-32042624	1	+	32013995	32042624	0	8	382,125,147,134,202,68,59,98,	0,16302,19192,22914,23839,24556,25519,28531,
#Partially deleted in new
chr1	32014181	32060850	chr1:32014181-32060850	0	+	32014181	32014181	789624	11	196,125,117,147,134,202,68,59,193,60,688,	0,16116,17342,19006,22728,23653,24370,25333,28345,31149,45981,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	32052290	32073474	chr1:32052290-32073474	3	-	32052290	32052290	8553170	3	442,44,138,	0,2180,21046,
#Partially deleted in new
chr1	32072030	32102863	chr1:32072030-32102863	0	+	32072030	32072030	8553170	9	422,127,220,84,155,337,188,121,433,	0,2920,3572,4732,5133,19644,22753,28411,30400,
#Partially deleted in new
chr1	32072901	32102861	chr1:32072901-32102861	3	+	32073047	32102673	789624	9	150,127,220,84,155,337,188,121,431,	0,2049,2701,3861,4262,18773,21882,27540,29529,
#Partially deleted in new
chr1	32072934	32091745	chr1:32072934-32091745	0	+	32073047	32091745	789624	5	117,127,220,155,71,	0,2016,2668,4229,18740,
#Partially deleted in new
chr1	32072942	32102866	chr1:32072942-32102866	0	+	32073047	32091905	789624	7	109,127,220,337,188,121,436,	0,2008,2660,18732,21841,27499,29488,
#Partially deleted in new
chr1	32072958	32092009	chr1:32072958-32092009	0	+	32072958	32072958	8553170	6	93,127,156,84,155,335,	0,1992,2708,3804,4205,18716,
#Partially deleted in new
chr1	32072968	32102866	chr1:32072968-32102866	0	+	32072968	32072968	8553170	10	83,127,220,83,84,155,337,188,121,436,	0,1982,2634,3595,3794,4195,18706,21815,27473,29462,
#Partially deleted in new
chr1	32072984	32091744	chr1:32072984-32091744	0	+	32072984	32072984	8553170	6	114,127,220,84,155,70,	0,1966,2618,3778,4179,18690,
#Partially deleted in new
chr1	32073165	32102866	chr1:32073165-32102866	0	+	32073165	32073165	8553170	11	127,96,127,220,84,155,337,188,103,121,436,	0,611,1785,2437,3597,3998,18509,21618,22494,27276,29265,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	32086948	32087007	chr1:32086948-32087007	3	+	32086948	32086948	5263520	1	59,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	32087522	32087813	chr1:32087522-32087813	3	-	32087522	32087522	8553170	1	291,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	32108037	32176568	chr1:32108037-32176568	3	+	32108130	32170894	0	14	97,134,93,100,95,132,89,100,164,79,126,128,179,5862,	0,46550,48815,49308,50229,51362,52577,53909,54323,55197,58067,59131,61844,62669,
#Partially deleted in new
chr1	32108057	32173173	chr1:32108057-32173173	0	+	32108130	32160639	789624	14	77,134,75,100,95,132,85,100,164,79,126,128,179,2467,	0,46530,48795,49288,50209,51342,52561,53889,54303,55177,58047,59111,61824,62649,
#Partially deleted in new
chr1	32142922	32162394	chr1:32142922-32162394	0	+	32142922	32142922	8553170	9	102,134,93,100,95,132,89,100,34,	0,11665,13930,14423,15344,16477,17692,19024,19438,
#Partially deleted in new
chr1	32156861	32167296	chr1:32156861-32167296	0	+	32156861	32167296	789624	9	84,100,95,89,100,164,79,126,128,	0,484,1405,3753,5085,5499,6373,9243,10307,
#Partially deleted in new
chr1	32170732	32176568	chr1:32170732-32176568	3	+	32170732	32170732	8553170	2	474,193,	0,5643,
#Partially deleted in new
chr1	32179685	32198285	chr1:32179685-32198285	3	+	32180345	32195195	789624	11	91,201,336,92,171,195,120,75,93,96,3384,	0,628,1556,4839,8268,10369,12625,12971,13522,14379,15216,
#Partially deleted in new
chr1	32180064	32198285	chr1:32180064-32198285	1	+	32180345	32195195	789624	10	450,336,92,171,195,120,75,93,96,3384,	0,1177,4460,7889,9990,12246,12592,13143,14000,14837,
#Partially deleted in new
chr1	32200385	32205387	chr1:32200385-32205387	3	+	32201935	32205248	789624	6	324,187,167,194,23,194,	0,1527,3493,3800,4212,4808,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	32200600	32203159	chr1:32200600-32203159	0	+	32201935	32202308	789624	3	109,187,939,	0,1312,1620,
#Partially deleted in new
chr1	32200632	32205387	chr1:32200632-32205387	1	+	32201935	32204798	789624	5	77,187,167,194,790,	0,1280,3246,3553,3965,
#Partially deleted in new
chr1	32200643	32205383	chr1:32200643-32205383	0	+	32201935	32204291	789624	6	66,187,167,147,23,190,	0,1269,3235,3589,3954,4550,
#Partially deleted in new
chr1	32201695	32205214	chr1:32201695-32205214	0	+	32201695	32201695	8553170	4	404,167,23,21,	0,2183,2902,3498,
#Deleted in new
chr1	32204768	32206185	chr1:32204768-32206185	3	-	32204768	32204768	8553170	2	571,71,	0,1346,
#Deleted in new
chr1	32205497	32206814	chr1:32205497-32206814	1	-	32205497	32205497	8553170	4	261,194,129,202,	0,617,902,1115,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	32205660	32208687	chr1:32205660-32208687	3	+	32205681	32208082	789624	5	63,144,253,119,1448,	0,493,848,1341,1579,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	32205670	32208682	chr1:32205670-32208682	1	+	32205681	32208082	789624	5	293,144,253,119,1443,	0,483,838,1331,1569,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	32205670	32208548	chr1:32205670-32208548	0	+	32205670	32205670	8553170	4	53,608,119,1309,	0,483,1331,1569,
#Partially deleted in new
chr1	32209093	32216196	chr1:32209093-32216196	3	+	32209093	32215897	789624	9	266,52,77,132,147,40,136,104,395,	0,2178,2667,2976,3396,3660,5703,6346,6708,
#Partially deleted in new
chr1	32209095	32216192	chr1:32209095-32216192	0	+	32209095	32209095	8553170	7	264,52,876,40,136,104,391,	0,2176,2665,3658,5701,6344,6706,
#Partially deleted in new
chr1	32214471	32221196	chr1:32214471-32221196	0	-	32214471	32214471	8553170	4	578,413,1679,66,	0,664,1201,6659,
#Partially deleted in new
chr1	32214476	32222348	chr1:32214476-32222348	0	-	32216409	32222322	789624	10	573,81,123,88,134,59,93,67,152,42,	0,659,1196,1717,1907,2412,2782,6654,7390,7830,
#Partially deleted in new
chr1	32214476	32222333	chr1:32214476-32222333	0	-	32217521	32222322	789624	11	573,81,123,88,134,59,93,141,67,152,27,	0,659,1196,1717,1907,2412,2782,2960,6654,7390,7830,
#Deleted in new
chr1	32214476	32215795	chr1:32214476-32215795	0	-	32214476	32214476	8553170	2	256,123,	0,1196,
#Partially deleted in new
chr1	32214477	32222347	chr1:32214477-32222347	0	-	32216409	32222322	789624	9	572,660,88,134,59,93,67,152,41,	0,658,1716,1906,2411,2781,6653,7389,7829,
#Partially deleted in new
chr1	32215846	32222335	chr1:32215846-32222335	0	-	32216409	32222322	789624	7	435,134,59,93,67,152,29,	0,537,1042,1412,5284,6020,6460,
#Partially deleted in new
chr1	32216196	32222325	chr1:32216196-32222325	3	-	32216852	32222322	789624	5	751,93,67,152,19,	0,1062,4934,5670,6110,
#Partially deleted in new
chr1	32216196	32222343	chr1:32216196-32222343	1	-	32217043	32222322	789624	4	1155,67,152,37,	0,4934,5670,6110,
#Partially deleted in new
chr1	32216199	32222338	chr1:32216199-32222338	1	-	32216409	32222322	789624	6	318,59,93,67,152,32,	0,689,1059,4931,5667,6107,
#Partially deleted in new
chr1	32216356	32222359	chr1:32216356-32222359	0	-	32216852	32222322	789624	3	591,93,53,	0,902,5950,
#Deleted in new
chr1	32216588	32217427	chr1:32216588-32217427	0	-	32216588	32216588	8553170	2	353,169,	0,670,
#Partially deleted in new
chr1	32216729	32222319	chr1:32216729-32222319	0	-	32216729	32216729	8553170	5	218,93,141,67,453,	0,529,707,4401,5137,
#Partially deleted in new
chr1	32221927	32226295	chr1:32221927-32226295	0	+	32222441	32226295	789624	6	105,87,93,88,66,125,	0,430,610,2106,2482,4243,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	32222369	32231604	chr1:32222369-32231604	3	+	32222441	32231196	789624	11	75,93,88,66,150,128,111,90,74,93,490,	0,168,1664,2040,3801,4033,6129,6357,6765,8557,8745,
#Partially deleted in new
chr1	32222406	32226472	chr1:32222406-32226472	0	+	32222406	32222406	8553170	6	38,93,88,66,172,70,	0,131,1627,2003,3742,3996,
#Partially deleted in new
chr1	32222436	32228814	chr1:32222436-32228814	0	+	32222436	32222436	8553170	7	194,88,66,150,128,111,88,	0,1597,1973,3734,3966,6062,6290,
#Partially deleted in new
chr1	32222439	32229208	chr1:32222439-32229208	0	+	32222439	32222439	8553170	6	191,150,128,111,90,74,	0,3731,3963,6059,6287,6695,
#Partially deleted in new
chr1	32222544	32231054	chr1:32222544-32231054	0	+	32222544	32222544	8553170	7	86,88,66,111,90,74,128,	0,1489,1865,5954,6182,6590,8382,
#Partially deleted in new
chr1	32231657	32240790	chr1:32231657-32240790	5	-	32231657	32231657	16724991	6	312,143,111,259,131,922,	0,384,3046,3294,7637,8211,
#Partially deleted in new
chr1	32231659	32240422	chr1:32231659-32240422	4	-	32231659	32231659	16724991	4	310,143,162,554,	0,382,3292,8209,
#Partially deleted in new
chr1	32231846	32241592	chr1:32231846-32241592	5	-	32231846	32231846	16724991	10	123,143,221,111,162,199,169,121,109,187,	0,195,2556,2857,3105,8044,8650,8935,9292,9559,
#Deleted in new
chr1	32247232	32248856	chr1:32247232-32248856	3	+	32247421	32248601	789624	2	450,486,	0,1138,
#Partially deleted in new
chr1	32251238	32286165	chr1:32251238-32286165	3	+	32274329	32285716	0	13	133,110,82,91,99,104,150,153,180,77,154,132,652,	0,23086,23498,23754,24082,24330,24675,25098,25368,28432,28602,28840,34275,
#Partially deleted in new
chr1	32251238	32286164	chr1:32251238-32286164	1	+	32274329	32285716	789624	11	133,110,347,99,104,150,180,77,154,132,651,	0,23086,23498,24082,24330,24675,25368,28432,28602,28840,34275,
#Partially deleted in new
chr1	32251263	32275618	chr1:32251263-32275618	0	+	32274329	32275618	789624	5	108,110,347,99,50,	0,23061,23473,24057,24305,
#Partially deleted in new
chr1	32251273	32279909	chr1:32251273-32279909	0	+	32274329	32279909	789624	10	98,110,82,91,99,104,150,180,77,69,	0,23051,23463,23719,24047,24295,24640,25333,28397,28567,
#Partially deleted in new
chr1	32251274	32275255	chr1:32251274-32275255	0	+	32251274	32251274	8553170	3	97,110,519,	0,23050,23462,
#Partially deleted in new
chr1	32251297	32275446	chr1:32251297-32275446	0	+	32251297	32251297	8553170	4	74,110,82,454,	0,23027,23439,23695,
#Partially deleted in new
chr1	32251317	32286160	chr1:32251317-32286160	0	+	32251317	32251317	8553170	12	54,110,82,91,99,104,150,153,180,324,132,647,	0,23007,23419,23675,24003,24251,24596,25019,25289,28353,28761,34196,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	32269337	32269597	chr1:32269337-32269597	3	-	32269337	32269337	8553170	1	260,	0,
#Partially deleted in new
chr1	32274110	32286164	chr1:32274110-32286164	1	+	32274329	32285716	0	13	116,110,82,91,99,104,150,153,180,77,154,132,651,	0,214,626,882,1210,1458,1803,2226,2496,5560,5730,5968,11403,
#Partially deleted in new
chr1	32274112	32275078	chr1:32274112-32275078	0	+	32274329	32275078	789624	3	114,110,342,	0,212,624,
#Partially deleted in new
chr1	32274114	32275604	chr1:32274114-32275604	0	+	32274329	32275604	789624	6	112,131,82,91,99,36,	0,189,622,878,1206,1454,
#Partially deleted in new
chr1	32274120	32276428	chr1:32274120-32276428	0	+	32274197	32276428	789624	7	314,82,91,99,104,150,92,	0,616,872,1200,1448,1793,2216,
#Partially deleted in new
chr1	32274120	32275002	chr1:32274120-32275002	0	+	32274197	32275002	789624	2	314,266,	0,616,
#Partially deleted in new
chr1	32274131	32286162	chr1:32274131-32286162	1	+	32274329	32285716	0	13	95,110,82,91,99,104,150,153,180,167,154,132,649,	0,193,605,861,1189,1437,1782,2205,2475,5449,5709,5947,11382,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	32275619	32277173	chr1:32275619-32277173	0	+	32275619	32275619	8553170	4	53,150,153,567,	0,294,717,987,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	32286451	32286561	chr1:32286451-32286561	3	-	32286451	32286451	8553170	1	110,	0,
#Partially deleted in new
chr1	32292085	32333635	chr1:32292085-32333635	3	+	32292169	32333044	0	14	133,113,118,75,139,142,93,109,141,109,131,153,49,619,	0,10535,24579,32393,34853,35450,36982,38492,38682,39388,39590,40004,40615,40931,
#Partially deleted in new
chr1	32292134	32327674	chr1:32292134-32327674	0	+	32292134	32292134	8553170	7	84,113,118,75,139,53,139,	0,10486,24530,32344,34804,35271,35401,
#Partially deleted in new
chr1	32292136	32327445	chr1:32292136-32327445	0	+	32292136	32292136	8553170	5	82,113,118,75,507,	0,10484,24528,32342,34802,
#Partially deleted in new
chr1	32292139	32329140	chr1:32292139-32329140	0	+	32292169	32329140	789624	6	79,113,118,139,142,73,	0,10481,24525,34799,35396,36928,
#Partially deleted in new
chr1	32292160	32327677	chr1:32292160-32327677	0	+	32292160	32292160	8553170	5	58,118,75,139,142,	0,24504,32318,34778,35375,
#Partially deleted in new
chr1	32327188	32331781	chr1:32327188-32331781	0	+	32327188	32327188	8553170	6	489,93,109,141,109,106,	0,1879,3389,3579,4285,4487,
#Partially deleted in new
chr1	32327273	32331582	chr1:32327273-32331582	0	+	32327273	32327273	8553170	6	185,142,93,109,141,109,	0,262,1794,3304,3494,4200,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	32329479	32333635	chr1:32329479-32333635	0	+	32329479	32329479	8553170	7	1207,141,109,131,153,49,619,	0,1288,1994,2196,2610,3221,3537,
#Deleted in new
chr1	32330148	32330875	chr1:32330148-32330875	0	+	32330148	32330148	8553170	3	429,24,108,	0,514,619,
#Deleted in new
chr1	32331535	32333079	chr1:32331535-32333079	0	+	32331535	32331535	8553170	4	47,567,49,63,	0,140,1165,1481,
#Deleted in new
chr1	32333831	32336379	chr1:32333831-32336379	3	-	32334596	32336033	789624	2	1266,433,	0,2115,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	32349193	32350663	chr1:32349193-32350663	3	-	32349193	32349193	8553170	2	628,59,	0,1411,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	32351520	32353541	chr1:32351520-32353541	0	+	32351520	32351520	8553170	3	89,91,86,	0,1191,1935,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	32352728	32354096	chr1:32352728-32354096	0	+	32352728	32352728	8553170	2	74,641,	0,727,
#Partially deleted in new
chr1	32353453	32363779	chr1:32353453-32363779	0	+	32363674	32363779	789624	2	88,185,	0,10141,
#Deleted in new
chr1	32361269	32362243	chr1:32361269-32362243	3	-	32361432	32362091	789624	3	266,147,286,	0,460,688,
#Deleted in new
chr1	32361270	32364223	chr1:32361270-32364223	0	-	32361270	32361270	8553170	2	265,2494,	0,459,
#Deleted in new
chr1	32361297	32361824	chr1:32361297-32361824	0	-	32361500	32361824	789624	2	267,95,	0,432,
#Deleted in new
chr1	32361728	32364278	chr1:32361728-32364278	0	-	32361728	32361728	8553170	3	148,94,204,	0,229,2346,
#Deleted in new
chr1	32362196	32364312	chr1:32362196-32364312	3	+	32362701	32364256	789624	2	650,718,	0,1398,
#Partially deleted in new
chr1	32365102	32394448	chr1:32365102-32394448	3	-	32366621	32394414	789624	11	1552,104,480,79,69,116,55,168,117,61,45,	0,3344,11159,12867,13112,13621,16111,18727,21676,28977,29301,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	32365112	32394428	chr1:32365112-32394428	0	-	32368528	32394414	789624	12	1542,104,109,480,79,69,116,55,168,117,61,25,	0,3334,4117,11149,12857,13102,13611,16101,18717,21666,28967,29291,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	32365170	32394426	chr1:32365170-32394426	1	-	32368332	32394414	789624	10	3380,480,79,69,116,55,219,117,61,23,	0,11091,12799,13044,13553,16043,18659,21608,28909,29233,
#Partially deleted in new
chr1	32366295	32394441	chr1:32366295-32394441	1	-	32366621	32394414	789624	9	359,104,480,79,69,116,55,61,38,	0,2151,9966,11674,11919,12428,14918,27784,28108,
#Partially deleted in new
chr1	32366300	32394441	chr1:32366300-32394441	1	-	32366621	32394414	789624	10	354,104,480,79,69,116,55,117,61,38,	0,2146,9961,11669,11914,12423,14913,20478,27779,28103,
#Partially deleted in new
chr1	32366476	32394430	chr1:32366476-32394430	1	-	32366621	32394414	789624	11	178,104,480,79,69,116,55,219,117,61,27,	0,1970,9785,11493,11738,12247,14737,17353,20302,27603,27927,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	32368024	32374782	chr1:32368024-32374782	0	-	32368024	32368024	8553170	2	526,90,	0,6668,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	32368032	32394428	chr1:32368032-32394428	0	-	32383933	32394414	789624	10	518,480,79,69,116,55,110,117,61,25,	0,8229,9937,10182,10691,13181,15797,18746,26047,26371,
#Partially deleted in new
chr1	32376629	32394425	chr1:32376629-32394425	0	-	32378758	32394414	789624	7	112,79,69,116,117,61,22,	0,1340,1585,2094,10149,17450,17774,
#Partially deleted in new
chr1	32376686	32394425	chr1:32376686-32394425	0	-	32376686	32394128	789624	8	55,79,69,116,55,110,61,22,	0,1283,1528,2037,4527,7143,17393,17717,
#Partially deleted in new
chr1	32378226	32394428	chr1:32378226-32394428	0	-	32378226	32394414	789624	6	57,116,55,168,61,25,	0,497,2987,5603,15853,16177,
#Partially deleted in new
chr1	32378762	32394731	chr1:32378762-32394731	0	-	32378762	32378762	8553170	5	77,55,77,117,652,	0,2451,5067,8016,15317,
#Partially deleted in new
chr1	32383896	32394431	chr1:32383896-32394431	0	-	32383896	32383896	8553170	3	101,117,352,	0,2882,10183,
#Partially deleted in new
chr1	32383940	32394425	chr1:32383940-32394425	0	-	32383940	32383940	8553170	3	108,117,346,	0,2838,10139,
#Partially deleted in new
chr1	32386420	32394431	chr1:32386420-32394431	0	-	32386420	32386420	8553170	3	475,61,28,	0,7659,7983,
#Deleted in new
chr1	32393600	32394425	chr1:32393600-32394425	0	-	32393600	32393600	8553170	2	540,22,	0,803,
#Partially deleted in new
chr1	32402108	32403115	chr1:32402108-32403115	7	-	32402108	32402108	16724991	1	1007,	0,
#Deleted in new
chr1	32421978	32422319	chr1:32421978-32422319	7	+	32421978	32421978	16724991	1	341,	0,
#Partially deleted in new
chr1	32423213	32426789	chr1:32423213-32426789	7	-	32423213	32423213	16724991	4	460,784,383,174,	0,1246,2855,3402,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	32457834	32458135	chr1:32457834-32458135	3	+	32457834	32457834	8553170	1	301,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	32465068	32496686	chr1:32465068-32496686	3	+	32470624	32485418	789624	4	37,1032,179,11586,	0,5515,15822,20032,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	32539426	32605939	chr1:32539426-32605939	3	+	32592931	32600419	789624	5	146,82,824,170,5853,	0,14032,53504,55627,60660,
#Partially deleted in new
chr1	32539428	32600990	chr1:32539428-32600990	1	+	32592931	32600297	789624	5	144,82,824,170,723,	0,14030,53502,55625,60839,
#Partially deleted in new
chr1	32600171	32650565	chr1:32600171-32650565	1	-	32600252	32650565	789624	2	179,133,	0,50261,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	32620819	32650584	chr1:32620819-32650584	3	-	32621861	32650565	789624	7	1129,37,53,83,122,25,152,	0,6688,11007,12825,13131,13948,29613,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	32621310	32650549	chr1:32621310-32650549	0	-	32621861	32650549	789624	4	638,37,25,117,	0,6197,13457,29122,
#Partially deleted in new
chr1	32621603	32650554	chr1:32621603-32650554	0	-	32621861	32650554	789624	6	345,37,53,83,122,126,	0,5904,10223,12041,12347,28825,
#Partially deleted in new
chr1	32621829	32650525	chr1:32621829-32650525	1	-	32621861	32634715	789624	7	119,37,53,83,122,91,93,	0,5678,9997,11815,12121,12872,28603,
#Partially deleted in new
chr1	32621829	32650560	chr1:32621829-32650560	0	-	32621901	32650560	789624	6	119,37,83,122,25,128,	0,5678,11815,12121,12938,28603,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	32621829	32632058	chr1:32621829-32632058	0	-	32621829	32621829	8553170	3	119,37,232,	0,5678,9997,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	32621829	32650535	chr1:32621829-32650535	0	-	32634001	32650535	789624	7	119,37,93,83,160,25,103,	0,5678,11432,11815,12121,12938,28603,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	32621829	32634061	chr1:32621829-32634061	0	-	32632321	32634061	789624	6	119,37,53,138,83,111,	0,5678,9997,10378,11815,12121,
#Partially deleted in new
chr1	32621840	32650550	chr1:32621840-32650550	0	-	32634086	32650550	789624	7	108,37,53,83,160,25,122,	0,5667,9986,11804,12110,12927,28588,
#Partially deleted in new
chr1	32621857	32650525	chr1:32621857-32650525	1	-	32621861	32634023	789624	6	91,37,53,83,160,124,	0,5650,9969,11787,12093,28544,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	32627571	32650535	chr1:32627571-32650535	0	-	32627571	32627571	8553170	6	294,53,83,122,25,103,	0,4255,6073,6379,7196,22861,
#Partially deleted in new
chr1	32631824	32650903	chr1:32631824-32650903	0	-	32634072	32650565	789624	4	55,83,160,471,	0,1820,2126,18608,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	32631826	32634522	chr1:32631826-32634522	0	-	32631826	32631826	8553170	3	53,83,572,	0,1818,2124,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	32634357	32650535	chr1:32634357-32650535	0	-	32634357	32634357	8553170	2	435,103,	0,16075,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	32639950	32640052	chr1:32639950-32640052	3	+	32639950	32639950	8553170	1	102,	0,
#Partially deleted in new
chr1	32651141	32680053	chr1:32651141-32680053	1	+	32651306	32679705	0	12	181,145,146,174,116,161,127,78,77,58,111,414,	0,775,6285,17083,17597,17830,18089,18344,21308,21500,21649,28498,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	32651147	32686211	chr1:32651147-32686211	3	+	32651306	32679705	0	12	175,148,146,174,116,161,127,78,77,58,111,6572,	0,766,6279,17077,17591,17824,18083,18338,21302,21494,21643,28492,
#Partially deleted in new
chr1	32651177	32669088	chr1:32651177-32669088	0	+	32651306	32668249	789624	5	145,148,174,116,117,	0,736,17047,17561,17794,
#Partially deleted in new
chr1	32651209	32668579	chr1:32651209-32668579	0	+	32651209	32651209	8553170	4	113,148,146,355,	0,704,6217,17015,
#Partially deleted in new
chr1	32651213	32669102	chr1:32651213-32669102	0	+	32651213	32651213	8553170	5	109,148,79,116,131,	0,700,17106,17525,17758,
#Partially deleted in new
chr1	32651216	32680204	chr1:32651216-32680204	0	+	32651306	32668838	789624	10	106,148,116,161,127,78,77,58,111,565,	0,697,17522,17755,18014,18269,21233,21425,21574,28423,
#Partially deleted in new
chr1	32651216	32669267	chr1:32651216-32669267	0	+	32651306	32668838	789624	5	106,148,116,161,37,	0,697,17522,17755,18014,
#Partially deleted in new
chr1	32651217	32657674	chr1:32651217-32657674	0	+	32651217	32651217	8553170	3	105,148,248,	0,696,6209,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	32651225	32652506	chr1:32651225-32652506	0	+	32651225	32651225	8553170	2	97,593,	0,688,
#Partially deleted in new
chr1	32651233	32680657	chr1:32651233-32680657	1	+	32651306	32680546	0	12	89,148,146,174,116,161,127,78,77,58,111,132,	0,680,6193,16991,17505,17738,17997,18252,21216,21408,21557,29292,
#Partially deleted in new
chr1	32651355	32680040	chr1:32651355-32680040	1	+	32652002	32679705	0	12	77,148,146,174,116,161,127,78,77,58,111,401,	0,558,6071,16869,17383,17616,17875,18130,21094,21286,21435,28284,
#Partially deleted in new
chr1	32651484	32657572	chr1:32651484-32657572	0	+	32652002	32657572	789624	3	338,148,146,	0,429,5942,
#Partially deleted in new
chr1	32651486	32668281	chr1:32651486-32668281	0	+	32652002	32668281	789624	4	229,148,146,57,	0,427,5940,16738,
#Partially deleted in new
chr1	32668318	32672901	chr1:32668318-32672901	0	+	32668318	32672901	789624	7	80,88,127,78,77,58,111,	0,726,912,1167,4131,4323,4472,
#Deleted in new
chr1	32668568	32669256	chr1:32668568-32669256	0	+	32668568	32668568	8553170	3	286,161,26,	0,403,662,
#Partially deleted in new
chr1	32669106	32680653	chr1:32669106-32680653	0	+	32669106	32679705	789624	8	26,127,78,77,58,111,178,128,	0,124,379,3343,3535,3684,10533,11419,
#Partially deleted in new
chr1	32669255	32680651	chr1:32669255-32680651	0	+	32669255	32680539	789624	7	102,78,77,58,111,64,126,	0,230,3194,3386,3535,10379,11270,
#Partially deleted in new
chr1	32680359	32703119	chr1:32680359-32703119	3	-	32681849	32702660	789624	5	1501,80,125,1180,512,	0,3650,3898,14505,22248,
#Partially deleted in new
chr1	32681490	32702756	chr1:32681490-32702756	1	-	32681787	32702660	789624	4	370,125,1180,149,	0,2767,13374,21117,
#Partially deleted in new
chr1	32695564	32703596	chr1:32695564-32703596	0	-	32695564	32695833	789624	2	480,89,	0,7943,
#Partially deleted in new
chr1	32695622	32703079	chr1:32695622-32703079	0	-	32695622	32695833	789624	2	422,130,	0,7327,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	32717733	32725237	chr1:32717733-32725237	3	-	32717733	32717733	8553170	2	235,160,	0,7344,
#Partially deleted in new
chr1	32741884	32774970	chr1:32741884-32774970	3	+	32741954	32772887	789624	7	305,171,56,124,114,2562,2106,	0,25902,26177,26767,27788,27995,30980,
#Partially deleted in new
chr1	32754018	32768946	chr1:32754018-32768946	0	+	32754018	32754018	8553170	4	162,171,56,295,	0,13768,14043,14633,
#Partially deleted in new
chr1	32754020	32774970	chr1:32754020-32774970	1	+	32754089	32772887	789624	7	160,171,56,124,114,2562,2106,	0,13766,14041,14631,15652,15859,18844,
#Partially deleted in new
chr1	32765633	32773197	chr1:32765633-32773197	1	+	32765769	32772887	789624	5	194,171,56,124,333,	0,2153,2428,3018,7231,
#Partially deleted in new
chr1	32765666	32774970	chr1:32765666-32774970	1	+	32765769	32772887	789624	7	161,171,56,124,114,2562,2106,	0,2120,2395,2985,4006,4213,7198,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	32775236	32782103	chr1:32775236-32782103	0	-	32775236	32775236	8553170	4	855,142,194,1056,	0,4145,4848,5811,
#Partially deleted in new
chr1	32775238	32818153	chr1:32775238-32818153	3	-	32775980	32817244	0	13	853,142,194,98,136,86,136,93,81,130,176,147,966,	0,4143,4846,5809,7165,11123,11701,15923,22524,31243,35352,35672,41949,
#Partially deleted in new
chr1	32775243	32780711	chr1:32775243-32780711	0	-	32775243	32775243	8553170	2	848,1330,	0,4138,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	32775680	32783755	chr1:32775680-32783755	0	-	32775680	32775680	8553170	5	411,142,194,98,1352,	0,3701,4404,5367,6723,
#Partially deleted in new
chr1	32775990	32786734	chr1:32775990-32786734	0	-	32775990	32775990	8553170	6	101,142,194,98,136,373,	0,3391,4094,5057,6413,10371,
#Partially deleted in new
chr1	32780250	32817244	chr1:32780250-32817244	1	-	32780250	32817244	789624	12	28,80,17,136,86,136,93,81,130,176,147,57,	0,797,878,2153,6111,6689,10911,17512,26231,30340,30660,36937,
#Partially deleted in new
chr1	32786369	32817317	chr1:32786369-32817317	0	-	32786369	32786369	8553170	9	78,136,93,47,81,130,176,147,130,	0,570,4792,11222,11393,20112,24221,24541,30818,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	32786939	32798214	chr1:32786939-32798214	0	-	32786939	32786939	8553170	4	136,93,47,452,	0,4222,10652,10823,
#Partially deleted in new
chr1	32790652	32806580	chr1:32790652-32806580	0	-	32790652	32790652	8553170	3	602,81,99,	0,7110,15829,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	32810730	32811647	chr1:32810730-32811647	0	-	32810730	32810730	8553170	2	36,737,	0,180,
#Partially deleted in new
chr1	32816766	32826489	chr1:32816766-32826489	0	+	32826099	32826489	789624	3	216,117,392,	0,8546,9331,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	32817441	32857854	chr1:32817441-32857854	1	+	32826099	32856038	789624	7	158,117,833,89,104,88,1931,	0,7871,8656,10551,12522,35637,38482,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	32817554	32858879	chr1:32817554-32858879	3	+	32826099	32856038	789624	7	135,117,833,89,104,88,2956,	0,7758,8543,10438,12409,35524,38369,
#Partially deleted in new
chr1	32817556	32826223	chr1:32817556-32826223	0	+	32826099	32826223	789624	4	133,53,117,126,	0,2990,7756,8541,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	32817574	32843187	chr1:32817574-32843187	0	+	32817574	32817574	8553170	7	115,117,833,86,104,28,405,	0,7738,8523,10421,12389,16459,25208,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	32817591	32837178	chr1:32817591-32837178	0	+	32817591	32817591	8553170	7	98,117,833,89,104,28,2314,	0,7721,8506,10401,12372,16442,17273,
#Partially deleted in new
chr1	32817652	32826460	chr1:32817652-32826460	0	+	32826099	32826460	789624	3	37,173,363,	0,7660,8445,
#Partially deleted in new
chr1	32817654	32826613	chr1:32817654-32826613	0	+	32826099	32826613	789624	2	35,516,	0,8443,
#Deleted in new
chr1	32817655	32818835	chr1:32817655-32818835	0	+	32817655	32817655	8553170	2	34,311,	0,869,
#Partially deleted in new
chr1	32817698	32826538	chr1:32817698-32826538	0	+	32826099	32826538	789624	3	148,117,441,	0,7614,8399,
#Deleted in new
chr1	32817737	32818832	chr1:32817737-32818832	0	+	32817737	32817737	8553170	2	109,308,	0,787,
#Deleted in new
chr1	32824896	32826115	chr1:32824896-32826115	0	+	32826099	32826115	8553170	2	533,18,	0,1201,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	32847314	32855958	chr1:32847314-32855958	0	+	32847314	32847314	8553170	3	408,88,35,	0,5764,8609,
#Partially deleted in new
chr1	32852748	32856174	chr1:32852748-32856174	0	+	32852748	32852748	8553170	3	212,88,251,	0,330,3175,
#Partially deleted in new
chr1	32852763	32856185	chr1:32852763-32856185	0	+	32852763	32852763	8553170	2	403,262,	0,3160,
#Partially deleted in new
chr1	32862267	32870813	chr1:32862267-32870813	1	-	32864293	32870746	789624	6	2032,134,90,199,116,161,	0,2396,5485,5922,6614,8385,
#Deleted in new
chr1	32862267	32864717	chr1:32862267-32864717	0	-	32862267	32862267	8553170	2	1509,54,	0,2396,
#Deleted in new
chr1	32862267	32863016	chr1:32862267-32863016	0	-	32862267	32862267	8553170	2	72,236,	0,513,
#Partially deleted in new
chr1	32862306	32870775	chr1:32862306-32870775	1	-	32864293	32870746	8553170	6	1993,134,90,166,116,123,	0,2357,5446,5883,6575,8346,
#Deleted in new
chr1	32863555	32864719	chr1:32863555-32864719	0	-	32863555	32863555	8553170	2	351,56,	0,1108,
#Partially deleted in new
chr1	32864293	32870746	chr1:32864293-32870746	1	-	32864293	32870746	0	6	6,134,90,199,116,94,	0,370,3459,3896,4588,6359,
#Partially deleted in new
chr1	32864448	32872480	chr1:32864448-32872480	3	-	32864609	32868373	0	5	349,90,199,112,87,	0,3304,3741,4433,7945,
#Partially deleted in new
chr1	32870873	32872482	chr1:32870873-32872482	0	-	32870873	32870873	8553170	2	103,89,	0,1520,
#Partially deleted in new
chr1	32885993	32894063	chr1:32885993-32894063	0	+	32885993	32885993	8553170	3	126,106,299,	0,7530,7771,
#Partially deleted in new
chr1	32886081	32893629	chr1:32886081-32893629	0	+	32886081	32886081	8553170	3	38,399,106,	0,2796,7442,
#Partially deleted in new
chr1	32886434	32894646	chr1:32886434-32894646	3	+	32888898	32893862	0	4	81,399,106,882,	0,2443,7089,7330,
#Partially deleted in new
chr1	32886461	32894143	chr1:32886461-32894143	0	+	32886461	32886461	8553170	3	54,106,379,	0,7062,7303,
#Deleted in new
chr1	32893523	32898441	chr1:32893523-32898441	0	+	32893523	32893523	8553170	2	106,397,	0,4521,
#Deleted in new
chr1	32894593	32895587	chr1:32894593-32895587	0	-	32894593	32894593	8553170	2	286,283,	0,711,
#Partially deleted in new
chr1	32894594	32901389	chr1:32894594-32901389	1	-	32894804	32901238	789624	5	285,135,90,194,167,	0,710,960,3531,6628,
#Partially deleted in new
chr1	32894594	32901358	chr1:32894594-32901358	3	-	32894804	32901238	789624	6	285,135,189,60,194,136,	0,710,960,1315,3531,6628,
#Partially deleted in new
chr1	32894740	32901352	chr1:32894740-32901352	0	-	32894740	32894740	8553170	6	139,135,90,60,194,130,	0,564,814,1169,3385,6482,
#Partially deleted in new
chr1	32894845	32901438	chr1:32894845-32901438	0	-	32894845	32894845	8553170	5	34,135,189,194,216,	0,459,709,3280,6377,
#Deleted in new
chr1	32895304	32897756	chr1:32895304-32897756	0	-	32895304	32895304	8553170	5	135,189,60,188,34,	0,250,605,793,2418,
#Partially deleted in new
chr1	32936444	32964685	chr1:32936444-32964685	3	-	32936805	32964685	789624	9	815,132,208,141,115,163,145,206,635,	0,1952,5807,7574,9069,9957,11777,13124,27606,
#Partially deleted in new
chr1	32936453	32964685	chr1:32936453-32964685	1	-	32937287	32964685	789624	9	856,132,208,141,115,163,142,206,635,	0,1943,5798,7565,9060,9948,11768,13115,27597,
#Partially deleted in new
chr1	32936667	32964685	chr1:32936667-32964685	1	-	32936805	32964685	789624	9	592,132,208,141,115,163,142,206,635,	0,1729,5584,7351,8846,9734,11554,12901,27383,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	32973552	32974463	chr1:32973552-32974463	3	+	32973552	32973552	8553170	1	911,	0,
#Deleted in new
chr1	32979946	32980472	chr1:32979946-32980472	7	+	32979946	32979946	16724991	1	526,	0,
#Partially deleted in new
chr1	32986951	32988233	chr1:32986951-32988233	7	+	32986951	32986951	16724991	2	673,190,	0,1092,
#Partially deleted in new
chr1	32987074	33032469	chr1:32987074-33032469	3	+	32987074	32987074	8553170	2	245,1435,	0,43960,
#Partially deleted in new
chr1	33007939	33036911	chr1:33007939-33036911	1	-	33014522	33036828	789624	6	2894,196,73,111,126,176,	0,5267,6582,13653,16502,28796,
#Partially deleted in new
chr1	33007983	33036870	chr1:33007983-33036870	1	-	33010828	33036828	0	7	2850,196,73,95,111,126,135,	0,5223,6538,13383,13609,16458,28752,
#Partially deleted in new
chr1	33010477	33036840	chr1:33010477-33036840	1	-	33010828	33036828	789624	6	356,196,73,95,111,105,	0,2729,4044,10889,11115,26258,
#Partially deleted in new
chr1	33010518	33012357	chr1:33010518-33012357	0	-	33010518	33010518	8553170	2	315,284,	0,1555,
#Partially deleted in new
chr1	33010630	33013287	chr1:33010630-33013287	0	-	33010630	33010630	8553170	4	203,263,49,81,	0,817,1443,2576,
#Partially deleted in new
chr1	33010754	33036886	chr1:33010754-33036886	1	-	33012117	33036828	789624	8	79,49,196,73,95,111,126,151,	0,1319,2452,3767,10612,10838,13687,25981,
#Partially deleted in new
chr1	33013043	33036992	chr1:33013043-33036992	3	-	33013180	33036828	0	6	359,73,95,111,126,257,	0,1478,8323,8549,11398,23692,
#Partially deleted in new
chr1	33013043	33036877	chr1:33013043-33036877	1	-	33014522	33036828	789624	5	359,73,111,126,142,	0,1478,8549,11398,23692,
#Partially deleted in new
chr1	33013206	33036902	chr1:33013206-33036902	0	-	33031625	33036828	789624	7	196,73,95,111,126,118,167,	0,1315,8160,8386,11235,18337,23529,
#Partially deleted in new
chr1	33014364	33021690	chr1:33014364-33021690	0	-	33014364	33014364	8553170	3	230,95,98,	0,7002,7228,
#Partially deleted in new
chr1	33014482	33021703	chr1:33014482-33021703	0	-	33014482	33014482	8553170	2	112,111,	0,7110,
#Partially deleted in new
chr1	33019682	33036844	chr1:33019682-33036844	1	-	33020097	33036828	789624	5	479,95,111,126,109,	0,1684,1910,4759,17053,
#Partially deleted in new
chr1	33021606	33080996	chr1:33021606-33080996	0	-	33021606	33021606	8553170	5	97,126,118,113,76,	0,2835,9937,58592,59314,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	33024119	33036868	chr1:33024119-33036868	0	-	33024119	33024119	8553170	2	448,133,	0,12616,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	33029231	33029576	chr1:33029231-33029576	3	-	33029231	33029231	8553170	1	345,	0,
#Partially deleted in new
chr1	33031625	33036859	chr1:33031625-33036859	1	-	33031625	33036828	789624	2	36,124,	0,5110,
#Partially deleted in new
chr1	33081103	33093400	chr1:33081103-33093400	0	+	33081103	33081103	8553170	5	191,118,177,173,119,	0,287,1074,10946,12178,
#Partially deleted in new
chr1	33081112	33120394	chr1:33081112-33120394	1	+	33082249	33120182	789624	12	182,121,212,177,174,173,135,166,163,113,215,351,	0,275,488,1065,2841,10937,12169,13435,15594,16954,36789,38931,
#Partially deleted in new
chr1	33081147	33120529	chr1:33081147-33120529	0	+	33081147	33081147	8553170	9	361,174,173,135,166,163,113,215,486,	0,2806,10902,12134,13400,15559,16919,36754,38896,
#Partially deleted in new
chr1	33081149	33120526	chr1:33081149-33120526	0	+	33081149	33081149	8553170	10	145,118,965,174,173,135,166,163,113,2625,	0,241,1028,2804,10900,12132,13398,15557,16917,36752,
#Partially deleted in new
chr1	33081154	33092221	chr1:33081154-33092221	0	+	33081154	33081154	8553170	4	354,177,174,172,	0,1023,2799,10895,
#Partially deleted in new
chr1	33081154	33120530	chr1:33081154-33120530	0	+	33081154	33081154	8553170	8	354,173,135,166,163,113,215,487,	0,10895,12127,13393,15552,16912,36747,38889,
#Deleted in new
chr1	33081160	33084127	chr1:33081160-33084127	0	+	33081160	33081160	8553170	3	134,121,174,	0,227,2793,
#Partially deleted in new
chr1	33081162	33096861	chr1:33081162-33096861	0	+	33081162	33081162	8553170	6	132,118,173,135,166,155,	0,228,10887,12119,13385,15544,
#Partially deleted in new
chr1	33081163	33094713	chr1:33081163-33094713	0	+	33081163	33081163	8553170	5	131,121,173,135,166,	0,224,10886,12118,13384,
#Partially deleted in new
chr1	33081164	33093416	chr1:33081164-33093416	0	+	33081164	33081164	8553170	6	344,177,125,174,173,135,	0,1013,1853,2789,10885,12117,
#Partially deleted in new
chr1	33081166	33120529	chr1:33081166-33120529	3	+	33082249	33120182	789624	11	128,118,177,174,173,135,166,163,113,215,486,	0,224,1011,2787,10883,12115,13381,15540,16900,36735,38877,
#Partially deleted in new
chr1	33081168	33092210	chr1:33081168-33092210	0	+	33081168	33081168	8553170	6	126,121,177,80,174,161,	0,219,1009,1894,2785,10881,
#Partially deleted in new
chr1	33081175	33096861	chr1:33081175-33096861	0	+	33081175	33081175	8553170	5	119,121,135,166,155,	0,212,12106,13372,15531,
#Partially deleted in new
chr1	33081658	33120530	chr1:33081658-33120530	0	+	33081658	33081658	8553170	7	2469,173,135,166,163,113,2629,	0,10391,11623,12889,15048,16408,36243,
#Partially deleted in new
chr1	33082249	33101893	chr1:33082249-33101893	1	+	33082249	33101892	789624	5	105,174,163,113,61,	0,1704,14457,15817,19583,
#Partially deleted in new
chr1	33082249	33120182	chr1:33082249-33120182	1	+	33082249	33120182	789624	9	105,174,173,135,166,163,173,215,139,	0,1704,9800,11032,12298,14457,15757,35652,37794,
#Partially deleted in new
chr1	33082905	33120521	chr1:33082905-33120521	0	+	33082905	33082905	8553170	8	1222,173,172,166,163,113,215,478,	0,9144,10339,11642,13801,15161,34996,37138,
#Partially deleted in new
chr1	33093241	33094713	chr1:33093241-33094713	0	+	33093241	33093241	8553170	2	175,166,	0,1306,
#Partially deleted in new
chr1	33094643	33096956	chr1:33094643-33096956	0	+	33094643	33094643	8553170	2	70,250,	0,2063,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	33141870	33143230	chr1:33141870-33143230	3	-	33141870	33141870	8553170	1	1360,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	33145401	33181666	chr1:33145401-33181666	3	-	33147176	33181432	789624	5	2326,116,257,96,642,	0,12851,14286,20069,35623,
#Partially deleted in new
chr1	33146701	33176550	chr1:33146701-33176550	1	-	33147176	33176452	789624	5	1026,116,257,96,143,	0,11551,12986,18769,29706,
#Partially deleted in new
chr1	33159691	33182053	chr1:33159691-33182053	0	-	33159691	33159691	8553170	4	253,96,397,60,	0,5779,21333,22302,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	33162850	33166298	chr1:33162850-33166298	3	+	33162850	33162850	8553170	1	3448,	0,
#Deleted in new
chr1	33181254	33182059	chr1:33181254-33182059	0	-	33181254	33181254	8553170	2	240,66,	0,739,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	33194787	33200353	chr1:33194787-33200353	3	+	33194787	33194787	8553170	2	1451,481,	0,5085,
#Partially deleted in new
chr1	33256544	33280414	chr1:33256544-33280414	0	+	33276100	33280414	789624	4	110,64,247,291,	0,19555,19803,23579,
#Partially deleted in new
chr1	33256572	33300719	chr1:33256572-33300719	3	+	33270574	33299046	789624	9	82,126,64,247,334,225,79,159,1790,	0,13914,19527,19775,23551,25014,38364,38574,42357,
#Partially deleted in new
chr1	33256618	33275248	chr1:33256618-33275248	0	+	33256618	33256618	8553170	3	36,126,35,	0,13868,18595,
#Deleted in new
chr1	33261211	33261680	chr1:33261211-33261680	3	+	33261211	33261211	8553170	1	469,	0,
#Partially deleted in new
chr1	33270574	33300719	chr1:33270574-33300719	1	+	33270574	33299046	789624	8	38,64,247,334,225,79,159,1790,	0,5525,5773,9549,11012,24362,24572,28355,
#Partially deleted in new
chr1	33280349	33281973	chr1:33280349-33281973	0	+	33280349	33280349	8553170	2	108,387,	0,1237,
#Partially deleted in new
chr1	33306765	33321098	chr1:33306765-33321098	3	-	33306765	33321098	789624	5	688,138,90,84,23,	0,5286,5735,6041,14310,
#Partially deleted in new
chr1	33307347	33325898	chr1:33307347-33325898	0	+	33307347	33307347	8553170	2	90,746,	0,17805,
#Partially deleted in new
chr1	33307365	33325898	chr1:33307365-33325898	0	+	33307365	33307365	8553170	2	72,719,	0,17814,
#Partially deleted in new
chr1	33307369	33325955	chr1:33307369-33325955	0	+	33307369	33307369	8553170	2	80,776,	0,17810,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	33307369	33326410	chr1:33307369-33326410	3	+	33307369	33307369	8553170	2	80,790,	0,18251,
#Partially deleted in new
chr1	33307370	33326043	chr1:33307370-33326043	1	+	33307370	33307370	8553170	3	79,134,423,	0,7319,18250,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	33313323	33325903	chr1:33313323-33325903	1	+	33313323	33313323	8553170	3	394,314,724,	0,1186,11856,
#Partially deleted in new
chr1	33313515	33325401	chr1:33313515-33325401	0	+	33313515	33313515	8553170	2	202,222,	0,11664,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	33314064	33325467	chr1:33314064-33325467	1	+	33314064	33314064	8553170	2	759,288,	0,11115,
#Partially deleted in new
chr1	33323622	33375593	chr1:33323622-33375593	1	-	33324864	33375539	789624	13	1397,277,142,115,130,203,166,416,313,165,78,159,228,	0,5247,6448,7725,8652,10467,30778,31215,43493,46798,47394,48666,51743,
#Partially deleted in new
chr1	33323625	33375593	chr1:33323625-33375593	3	-	33324864	33375539	789624	14	1394,277,142,115,130,203,166,413,313,87,165,78,159,228,	0,5244,6445,7722,8649,10464,30775,31215,43490,44910,46795,47391,48663,51740,
#Partially deleted in new
chr1	33323625	33349885	chr1:33323625-33349885	1	-	33324864	33334242	789624	7	1394,277,142,115,130,203,289,	0,5244,6445,7722,8649,10464,25971,
#Partially deleted in new
chr1	33323625	33355209	chr1:33323625-33355209	1	-	33324864	33355044	789624	8	1394,277,142,115,130,203,166,372,	0,5244,6445,7722,8649,10464,30775,31212,
#Partially deleted in new
chr1	33323625	33349811	chr1:33323625-33349811	0	-	33323625	33323625	8553170	8	1394,167,277,142,115,130,108,215,	0,2169,5244,6445,7722,8649,10559,25971,
#Partially deleted in new
chr1	33324688	33349884	chr1:33324688-33349884	0	-	33324688	33324688	8553170	8	331,277,142,115,75,130,108,288,	0,4181,5382,6659,6936,7586,9496,24908,
#Partially deleted in new
chr1	33325627	33349245	chr1:33325627-33349245	0	+	33325627	33325627	8553170	4	144,47,177,178,	0,21299,22045,23440,
#Partially deleted in new
chr1	33325627	33333654	chr1:33325627-33333654	0	+	33325627	33325627	8553170	2	144,407,	0,7620,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	33325627	33345832	chr1:33325627-33345832	0	+	33325627	33325627	8553170	2	144,693,	0,19512,
#Partially deleted in new
chr1	33330070	33349650	chr1:33330070-33349650	0	-	33330070	33330070	8553170	5	142,115,130,106,54,	0,1277,2204,4114,19526,
#Partially deleted in new
chr1	33330070	33349772	chr1:33330070-33349772	0	-	33330070	33330070	8553170	6	142,115,130,89,108,176,	0,1277,2204,3773,4114,19526,
#Deleted in new
chr1	33331363	33335256	chr1:33331363-33335256	0	-	33331363	33331363	8553170	4	99,130,203,91,	0,911,2726,3802,
#Deleted in new
chr1	33332392	33332492	chr1:33332392-33332492	3	-	33332392	33332392	5263520	1	100,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	33336565	33336864	chr1:33336565-33336864	3	-	33336565	33336565	8553170	1	299,	0,
#Partially deleted in new
chr1	33350351	33363245	chr1:33350351-33363245	3	+	33350351	33350351	789624	3	96,214,180,	0,8509,12714,
#Deleted in new
chr1	33353212	33354903	chr1:33353212-33354903	0	-	33353212	33353212	8553170	3	227,166,66,	0,1188,1625,
#Partially deleted in new
chr1	33368569	33392765	chr1:33368569-33392765	0	-	33368569	33368569	8553170	6	53,165,78,159,228,84,	0,1851,2447,3719,6796,24112,
#Partially deleted in new
chr1	33372325	33431052	chr1:33372325-33431052	0	-	33372325	33372325	8553170	3	122,228,77,	0,3040,58650,
#Deleted in new
chr1	33466248	33468954	chr1:33466248-33468954	7	+	33466248	33466248	16724991	1	2706,	0,
#Partially deleted in new
chr1	33472644	33496507	chr1:33472644-33496507	3	+	33479288	33495476	789624	8	43,527,187,77,85,678,429,2290,	0,6534,15820,16470,16873,18380,20542,21573,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	33472650	33492636	chr1:33472650-33492636	1	+	33479288	33491722	789624	4	41,527,187,1612,	0,6528,15814,18374,
#Partially deleted in new
chr1	33472659	33489245	chr1:33472659-33489245	0	+	33472659	33472659	8553170	4	32,527,187,131,	0,6519,15805,16455,
#Deleted in new
chr1	33512007	33512743	chr1:33512007-33512743	7	-	33512007	33512007	16724991	1	736,	0,
#Partially deleted in new
chr1	33513998	34165274	chr1:33513998-34165274	1	-	33519517	34165097	789624	71	2572,213,139,88,113,162,63,180,112,74,174,174,180,177,183,174,189,174,249,174,195,186,189,147,189,114,81,146,178,189,210,117,70,119,105,97,125,204,96,114,117,195,188,139,192,203,127,192,157,170,189,216,117,189,188,139,195,327,183,113,104,122,125,88,78,113,208,195,113,217,364,	0,5466,5813,7464,9308,10883,13197,19051,19797,23023,23437,26526,27131,28721,32038,36178,43735,45301,53594,55375,57533,58507,63297,66754,69643,72505,73089,86866,88370,91283,97042,100505,102907,103500,108168,109371,110520,111052,112487,119423,121215,122361,132649,138324,143947,148891,178931,184754,186518,195090,200588,202287,210198,210517,211350,212548,225141,229281,258570,274601,278424,296744,305714,306470,311698,332885,404095,421761,518595,574978,650912,
#Partially deleted in new
chr1	33513998	34165842	chr1:33513998-34165842	3	-	33519517	34165813	789624	70	2572,213,139,88,113,162,63,180,112,74,174,174,180,177,183,174,174,174,195,186,189,147,189,114,81,146,178,189,126,210,117,70,119,105,97,125,204,96,114,117,195,188,139,192,203,127,192,157,170,189,216,117,189,188,139,195,327,183,113,104,122,125,88,78,113,208,195,113,217,96,	0,5466,5813,7464,9308,10883,13197,19051,19797,23023,23437,26526,27131,28721,32038,36178,53594,55375,57533,58507,63297,66754,69643,72505,73089,86866,88370,91283,91864,97042,100505,102907,103500,108168,109371,110520,111052,112487,119423,121215,122361,132649,138324,143947,148891,178931,184754,186518,195090,200588,202287,210198,210517,211350,212548,225141,229281,258570,274601,278424,296744,305714,306470,311698,332885,404095,421761,518595,574978,651748,
#Partially deleted in new
chr1	33513998	34165842	chr1:33513998-34165842	1	-	33519517	34165813	789624	71	2572,213,139,88,113,162,63,180,112,74,174,174,180,177,183,174,189,174,249,174,195,186,189,147,189,114,81,146,178,189,210,117,70,119,105,97,125,204,96,114,117,195,188,139,192,203,127,192,157,170,189,216,117,189,188,139,195,327,183,113,104,122,125,88,78,113,208,195,113,217,96,	0,5466,5813,7464,9308,10883,13197,19051,19797,23023,23437,26526,27131,28721,32038,36178,43735,45301,53594,55375,57533,58507,63297,66754,69643,72505,73089,86866,88370,91283,97042,100505,102907,103500,108168,109371,110520,111052,112487,119423,121215,122361,132649,138324,143947,148891,178931,184754,186518,195090,200588,202287,210198,210517,211350,212548,225141,229281,258570,274601,278424,296744,305714,306470,311698,332885,404095,421761,518595,574978,651748,
#Partially deleted in new
chr1	33514008	34165842	chr1:33514008-34165842	0	-	33519517	34165813	789624	70	2562,213,139,88,113,162,63,180,112,74,174,174,180,177,183,174,174,174,195,186,189,147,189,114,81,146,178,189,126,210,117,70,119,105,97,125,204,96,114,117,195,188,139,192,203,127,192,157,170,189,216,117,189,188,139,195,327,183,113,104,122,125,88,78,113,208,195,113,217,96,	0,5456,5803,7454,9298,10873,13187,19041,19787,23013,23427,26516,27121,28711,32028,36168,53584,55365,57523,58497,63287,66744,69633,72495,73079,86856,88360,91273,91854,97032,100495,102897,103490,108158,109361,110510,111042,112477,119413,121205,122351,132639,138314,143937,148881,178921,184744,186508,195080,200578,202277,210188,210507,211340,212538,225131,229271,258560,274591,278414,296734,305704,306460,311688,332875,404085,421751,518585,574968,651738,
#Partially deleted in new
chr1	33559352	33572590	chr1:33559352-33572590	0	-	33559352	33559352	8553170	5	121,174,174,195,85,	0,8240,10021,12179,13153,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr1	33591806	33709504	chr1:33591806-33709504	1	-	33592460	33709283	789624	24	683,146,178,189,210,117,70,119,105,97,125,204,96,114,117,195,188,139,192,203,127,192,157,416,	0,9058,10562,13475,19234,22697,25099,25692,30360,31563,32712,33244,34679,41615,43407,44553,54841,60516,66139,71083,101123,106946,108710,117282,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	33598688	33626584	chr1:33598688-33626584	1	-	33600113	33623388	789624	13	1553,146,178,189,210,117,70,119,105,97,125,204,99,	0,2176,3680,6593,12352,15815,18217,18810,23478,24681,25830,26362,27797,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	33598688	33602477	chr1:33598688-33602477	0	-	33598688	33598688	8553170	2	2322,109,	0,3680,
#Partially deleted in new
chr1	33772107	33814219	chr1:33772107-33814219	1	-	33772560	33810859	789624	7	644,113,104,153,122,190,218,	0,16492,20315,32638,38635,40887,41894,
#Partially deleted in new
chr1	33792496	33819808	chr1:33792496-33819808	0	-	33792496	33792496	8553170	4	30,122,107,96,	0,18246,22799,27216,
#Deleted in new
chr1	33838522	33840140	chr1:33838522-33840140	7	+	33838522	33838522	16724991	1	1618,	0,
#Partially deleted in new
chr1	33860474	33864791	chr1:33860474-33864791	3	+	33864191	33864752	789624	2	416,1927,	0,2390,
#Partially deleted in new
chr1	33860499	33864791	chr1:33860499-33864791	1	+	33864191	33864752	789624	4	391,134,53,1927,	0,705,1973,2365,
#Deleted in new
chr1	33862180	33863463	chr1:33862180-33863463	0	+	33862180	33862180	8553170	3	31,205,201,	0,684,1082,
#Deleted in new
chr1	33864076	33864791	chr1:33864076-33864791	0	+	33864076	33864076	5263520	2	101,529,	0,186,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	33868952	33885458	chr1:33868952-33885458	3	+	33868952	33868952	789624	8	97,135,137,127,181,72,245,373,	0,250,1919,6513,9217,13210,15617,16133,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	33870196	33873767	chr1:33870196-33873767	1	+	33870196	33870196	8553170	3	298,137,220,	0,675,3351,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	33870225	33873811	chr1:33870225-33873811	0	+	33870225	33870225	8553170	3	199,137,210,	0,646,3376,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	33870225	33873708	chr1:33870225-33873708	0	+	33870225	33870225	8553170	3	199,137,164,	0,646,3319,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	33870550	33873647	chr1:33870550-33873647	0	+	33870550	33870550	8553170	2	458,100,	0,2997,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	33875465	33885423	chr1:33875465-33885423	0	+	33875465	33875465	8553170	3	127,181,338,	0,2704,9620,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	34112948	34113063	chr1:34112948-34113063	7	+	34112948	34112948	16724991	1	115,	0,
#Partially deleted in new
chr1	34166882	34219131	chr1:34166882-34219131	3	+	34197474	34218761	789624	7	289,689,261,176,78,197,446,	0,30342,33889,35201,41274,45327,51803,
#Partially deleted in new
chr1	34177669	34219131	chr1:34177669-34219131	1	+	34177789	34218761	789624	7	440,689,261,176,78,197,446,	0,19555,23102,24414,30487,34540,41016,
#Deleted in new
chr1	34276858	34277292	chr1:34276858-34277292	7	-	34276858	34276858	16724991	1	434,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	34669598	34669694	chr1:34669598-34669694	3	-	34669598	34669598	5263520	1	96,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	34712736	34859735	chr1:34712736-34859735	0	-	34718391	34855977	789624	5	1884,321,142,212,59,	0,3432,5531,143034,146940,
#Deleted in new
chr1	34755046	34758512	chr1:34755046-34758512	3	+	34757330	34758152	789624	2	149,1206,	0,2260,
#Deleted in new
chr1	34759740	34763724	chr1:34759740-34763724	3	+	34761254	34762055	789624	2	48,2792,	0,1192,
#Partially deleted in new
chr1	34761425	34788097	chr1:34761425-34788097	3	-	34761425	34761425	8553170	2	450,110,	0,26562,
#Partially deleted in new
chr1	34781188	34786364	chr1:34781188-34786364	3	+	34784762	34785575	789624	2	590,1627,	0,3549,
#Partially deleted in new
chr1	34782277	34786369	chr1:34782277-34786369	1	+	34784762	34785575	789624	2	165,1632,	0,2460,
#Deleted in new
chr1	34792997	34795747	chr1:34792997-34795747	3	+	34794213	34795215	789624	2	71,1551,	0,1199,
#Deleted in new
chr1	34792998	34795090	chr1:34792998-34795090	0	+	34794213	34795090	789624	2	70,989,	0,1103,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	34850693	34851555	chr1:34850693-34851555	3	+	34850693	34850693	8553170	2	456,264,	0,598,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	34852668	34859816	chr1:34852668-34859816	3	-	34855698	34855977	789624	2	3314,140,	0,7008,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	34855049	34859069	chr1:34855049-34859069	1	-	34855698	34855977	789624	2	933,1884,	0,2136,
#Partially deleted in new
chr1	34855168	34859755	chr1:34855168-34859755	1	-	34855698	34855977	789624	2	814,104,	0,4483,
#Partially deleted in new
chr1	34855348	34859717	chr1:34855348-34859717	1	-	34855698	34855977	789624	2	634,263,	0,4106,
#Partially deleted in new
chr1	34855688	34859045	chr1:34855688-34859045	1	-	34855698	34855977	789624	3	294,184,206,	0,867,3151,
#Partially deleted in new
chr1	34865435	34905383	chr1:34865435-34905383	1	-	34866082	34905383	789624	10	866,144,92,485,86,314,214,73,206,1107,	0,1612,2100,3169,19542,20042,20636,34233,34632,38841,
#Partially deleted in new
chr1	34865435	34929585	chr1:34865435-34929585	3	-	34866082	34905383	789624	12	866,144,92,485,86,314,214,73,206,1158,83,135,	0,1612,2100,3169,19542,20042,20636,34233,34632,38841,41919,64015,
#Partially deleted in new
chr1	34905164	34925494	chr1:34905164-34925494	0	-	34905164	34905164	8553170	3	270,83,121,	0,2190,20209,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	34974355	34985313	chr1:34974355-34985313	3	-	34977342	34985305	789624	2	3047,116,	0,10842,
#Partially deleted in new
chr1	34975698	34978706	chr1:34975698-34978706	7	-	34975698	34975698	16724991	3	1704,154,29,	0,2232,2979,
#Deleted in new
chr1	34976469	34977395	chr1:34976469-34977395	5	-	34976469	34976469	16724991	1	926,	0,
#Partially deleted in new
chr1	34981532	35031741	chr1:34981532-35031741	3	-	34983921	35030639	8553170	17	587,181,154,38,141,148,173,151,279,116,151,192,175,250,85,167,111,	0,2234,10701,22435,23599,25418,27219,28914,29225,30357,30898,33164,33455,37820,38850,49014,50098,
#Partially deleted in new
chr1	34981534	34985353	chr1:34981534-34985353	3	-	34981943	34985305	789624	3	585,181,156,	0,2232,3663,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	34986164	35031711	chr1:34986164-35031711	0	-	34986164	34986164	8553170	15	4147,154,38,141,148,173,151,279,116,151,192,175,85,210,81,	0,6069,17803,18967,20786,22587,24282,24593,25725,26266,28532,28823,34218,44382,45466,
#Partially deleted in new
chr1	34986979	35031968	chr1:34986979-35031968	3	-	34987103	35030639	789624	16	1956,154,38,141,148,173,151,279,116,151,192,175,250,85,167,154,	0,5254,16988,18152,19971,21772,23467,23778,24910,25451,27717,28008,32373,33403,43567,44835,
#Partially deleted in new
chr1	35003864	35008792	chr1:35003864-35008792	0	-	35003864	35003864	8553170	4	141,141,148,41,	0,1267,3086,4887,
#Deleted in new
chr1	35010546	35012456	chr1:35010546-35012456	0	-	35010546	35010546	8553170	3	490,116,26,	0,1343,1884,
#Partially deleted in new
chr1	35014865	35031632	chr1:35014865-35031632	0	-	35014865	35030639	789624	6	23,175,250,85,167,107,	0,122,4487,5517,15681,16660,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	35017243	35031905	chr1:35017243-35031905	1	-	35019267	35030639	789624	4	2359,85,167,91,	0,3139,13303,14571,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	35017249	35031847	chr1:35017249-35031847	0	-	35017249	35017249	8553170	3	2353,85,33,	0,3133,14565,
#Partially deleted in new
chr1	35018512	35031690	chr1:35018512-35031690	1	-	35019267	35030639	789624	5	1090,85,167,71,60,	0,1870,12034,12754,13118,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	35030148	35031935	chr1:35030148-35031935	0	-	35030148	35030148	8553170	2	565,121,	0,1666,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	35032171	35115624	chr1:35032171-35115624	3	+	35093987	35115259	8553170	13	269,123,226,122,170,73,250,175,213,154,141,44,2648,	0,4634,46822,61148,61742,63647,65145,72123,72385,78122,79600,79915,80805,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	35053467	35059271	chr1:35053467-35059271	7	+	35053467	35053467	16724991	2	246,232,	0,5572,
#Partially deleted in new
chr1	35059785	35113215	chr1:35059785-35113215	0	+	35093987	35113215	789624	11	140,226,170,73,250,175,213,154,141,44,239,	0,19208,34128,36033,37531,44509,44771,50508,51986,52301,53191,
#Partially deleted in new
chr1	35059785	35115856	chr1:35059785-35115856	1	+	35093987	35115259	789624	11	140,226,170,73,250,175,213,154,141,44,2880,	0,19208,34128,36033,37531,44509,44771,50508,51986,52301,53191,
#Partially deleted in new
chr1	35079366	35115855	chr1:35079366-35115855	1	+	35093987	35115259	789624	10	76,170,73,250,175,213,154,141,44,2879,	0,14547,16452,17950,24928,25190,30927,32405,32720,33610,
#Partially deleted in new
chr1	35079381	35097594	chr1:35079381-35097594	0	+	35079381	35079381	8553170	4	61,96,73,278,	0,14532,16437,17935,
#Partially deleted in new
chr1	35079390	35115854	chr1:35079390-35115854	0	+	35079390	35079390	8553170	9	52,73,250,175,213,154,141,44,2878,	0,16428,17926,24904,25166,30903,32381,32696,33586,
#Partially deleted in new
chr1	35079390	35111907	chr1:35079390-35111907	0	+	35079390	35079390	8553170	5	52,73,250,154,136,	0,16428,17926,30903,32381,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	35093238	35097478	chr1:35093238-35097478	0	+	35093238	35093238	8553170	4	203,170,73,162,	0,675,2580,4078,
#Partially deleted in new
chr1	35104242	35111777	chr1:35104242-35111777	0	+	35104242	35104242	8553170	4	227,213,154,6,	0,314,6051,7529,
#Deleted in new
chr1	35122021	35122484	chr1:35122021-35122484	7	+	35122021	35122021	16724991	1	463,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	35141514	35146435	chr1:35141514-35146435	3	-	35141514	35141514	8553170	3	1519,230,137,	0,3352,4784,
#Partially deleted in new
chr1	35176377	35188042	chr1:35176377-35188042	0	-	35178012	35188042	789624	6	94,81,48,122,49,70,	0,941,1611,10623,10825,11595,
#Partially deleted in new
chr1	35176377	35180645	chr1:35176377-35180645	0	-	35176377	35176377	8553170	3	97,81,2657,	0,941,1611,
#Partially deleted in new
chr1	35176377	35190574	chr1:35176377-35190574	0	-	35178012	35190574	789624	9	97,81,48,122,49,118,85,197,77,	0,941,1611,10623,10825,11595,12625,12808,14120,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	35176377	35177661	chr1:35176377-35177661	0	-	35176377	35176377	8553170	2	97,343,	0,941,
#Partially deleted in new
chr1	35176379	35179246	chr1:35176379-35179246	0	-	35176379	35176379	8553170	3	92,81,1258,	0,939,1609,
#Partially deleted in new
chr1	35176379	35179105	chr1:35176379-35179105	0	-	35176379	35176379	8553170	4	92,81,48,441,	0,939,1609,2285,
#Partially deleted in new
chr1	35176379	35181606	chr1:35176379-35181606	0	-	35176379	35176379	8553170	4	92,81,48,472,	0,939,1609,4755,
#Partially deleted in new
chr1	35176379	35181344	chr1:35176379-35181344	0	-	35176379	35176379	8553170	4	95,81,48,210,	0,939,1609,4755,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	35177208	35178136	chr1:35177208-35178136	0	-	35177208	35177208	8553170	2	191,148,	0,780,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	35182931	35193148	chr1:35182931-35193148	3	-	35184455	35193049	0	10	1662,122,49,118,85,197,96,302,189,927,	0,4069,4271,5041,6071,6254,7566,7762,8409,9290,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	35195968	35196062	chr1:35195968-35196062	3	+	35195968	35195968	8553170	1	94,	0,
#Partially deleted in new
chr1	35268966	35421944	chr1:35268966-35421944	3	+	35269046	35419677	789624	30	119,46,522,62,171,85,256,175,213,151,116,276,151,173,151,141,38,145,119,169,54,180,95,172,96,152,112,249,130,2475,	0,56393,89958,92227,92652,101062,101405,112292,112579,116475,117107,118036,118487,119943,120981,123245,123680,124628,127585,128410,129446,129897,130515,136056,136406,139041,145005,146499,149476,150503,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	35292195	35292498	chr1:35292195-35292498	3	-	35292195	35292195	8553170	1	303,	0,
#Deleted in new
chr1	35310273	35310425	chr1:35310273-35310425	3	+	35310273	35310273	8553170	1	152,	0,
#Deleted in new
chr1	35350721	35351607	chr1:35350721-35351607	7	+	35350721	35350721	16724991	1	886,	0,
#Partially deleted in new
chr1	35358821	35366077	chr1:35358821-35366077	3	-	35358821	35358821	8553170	2	347,112,	0,7144,
#Partially deleted in new
chr1	35361704	35422058	chr1:35361704-35422058	0	+	35361704	35419677	789624	24	85,85,256,175,213,276,151,173,151,141,38,145,116,169,54,180,95,172,96,152,112,249,130,2589,	0,8324,8667,19554,19841,25298,25749,27205,28243,30507,30942,31890,34850,35672,36708,37159,37777,43318,43668,46303,52267,53761,56738,57765,
#Partially deleted in new
chr1	35361716	35370853	chr1:35361716-35370853	0	+	35361716	35361716	8553170	3	73,85,482,	0,8312,8655,
#Partially deleted in new
chr1	35392679	35397462	chr1:35392679-35397462	0	+	35392679	35392679	8553170	5	5,145,119,72,86,	0,915,3872,4372,4697,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	35399996	35400319	chr1:35399996-35400319	3	+	35399996	35399996	8553170	1	323,	0,
#Partially deleted in new
chr1	35404843	35408052	chr1:35404843-35408052	0	+	35404843	35404843	8553170	3	351,96,45,	0,529,3164,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr1	35433489	35557413	chr1:35433489-35557413	3	-	35434893	35554491	0	21	1592,92,91,123,143,160,139,152,149,133,124,229,133,93,88,98,102,247,524,170,207,	0,7557,8756,9416,10671,14683,16377,16868,18138,20067,20872,22523,26815,29131,33118,37373,41315,45476,73122,120860,123717,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	35434104	35454707	chr1:35434104-35454707	1	-	35434893	35454452	789624	12	977,92,91,123,143,160,139,152,149,133,124,94,	0,6942,8141,8801,10056,14068,15762,16253,17523,19452,20257,20509,
#Partially deleted in new
chr1	35434964	35557655	chr1:35434964-35557655	0	-	35434964	35554491	789624	21	117,92,91,123,143,160,139,152,149,133,124,229,133,93,88,98,102,247,524,170,106,	0,6082,7281,7941,9196,13208,14902,15393,16663,18592,19397,21048,25340,27656,31643,35898,39840,44001,71647,119385,122585,
#Partially deleted in new
chr1	35435303	35444230	chr1:35435303-35444230	0	-	35435303	35435303	8553170	5	294,92,91,123,70,	0,5743,6942,7602,8857,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	35438541	35470906	chr1:35438541-35470906	0	-	35438541	35438541	8553170	15	2597,91,123,143,160,139,152,149,133,124,229,133,93,88,44,	0,3704,4364,5619,9631,11325,11816,13086,15015,15820,17471,21763,24079,28066,32321,
#Deleted in new
chr1	35442266	35443255	chr1:35442266-35443255	0	-	35442266	35442266	8553170	2	70,350,	0,639,
#Partially deleted in new
chr1	35443261	35450006	chr1:35443261-35450006	0	-	35443261	35443261	8553170	4	74,139,160,140,	0,903,4911,6605,
#Partially deleted in new
chr1	35444035	35448199	chr1:35444035-35448199	0	-	35444035	35444035	8553170	2	268,27,	0,4137,
#Partially deleted in new
chr1	35450364	35454287	chr1:35450364-35454287	0	-	35450364	35450364	8553170	4	145,149,133,51,	0,1263,3192,3872,
#Partially deleted in new
chr1	35451634	35554987	chr1:35451634-35554987	0	-	35451634	35554491	789624	13	142,133,124,229,133,93,88,98,102,247,524,170,88,	0,1922,2727,4378,8670,10986,14973,19228,23170,27331,54977,102715,103265,
#Partially deleted in new
chr1	35453552	35454636	chr1:35453552-35454636	0	-	35453552	35453552	8553170	2	137,275,	0,809,
#Partially deleted in new
chr1	35460307	35506867	chr1:35460307-35506867	0	-	35460307	35506867	789624	6	130,93,88,98,247,256,	0,2313,6300,10555,18658,46304,
#Partially deleted in new
chr1	35460373	35557950	chr1:35460373-35557950	0	-	35466675	35554491	789624	8	60,93,88,102,247,524,170,240,	0,2247,6234,14431,18592,46238,93976,97337,
#Partially deleted in new
chr1	35466607	35557405	chr1:35466607-35557405	0	-	35466675	35554491	789624	6	88,102,247,524,170,358,	0,8197,12358,40004,87742,90440,
#Partially deleted in new
chr1	35466609	35557375	chr1:35466609-35557375	0	-	35479120	35554491	789624	6	86,98,102,247,170,169,	0,4253,8195,12356,87740,90597,
#Partially deleted in new
chr1	35474868	35557612	chr1:35474868-35557612	0	-	35474868	35474868	8553170	4	38,247,524,63,	0,4097,31743,82681,
#Partially deleted in new
chr1	35479059	35557403	chr1:35479059-35557403	0	-	35479059	35554491	789624	4	153,524,170,42,	0,27552,75290,78302,
#Partially deleted in new
chr1	35506738	35554987	chr1:35506738-35554987	0	-	35506738	35554491	789624	3	397,170,199,	0,47611,48050,
#Partially deleted in new
chr1	35509741	35511438	chr1:35509741-35511438	7	+	35509741	35509741	16724991	4	161,229,121,492,	0,365,720,1205,
#Partially deleted in new
chr1	35533095	35557603	chr1:35533095-35557603	0	-	35533095	35533095	8553170	3	346,170,54,	0,21254,24454,
#Deleted in new
chr1	35556470	35557388	chr1:35556470-35557388	0	-	35556470	35556470	8553170	2	287,182,	0,736,
#Partially deleted in new
chr1	35557472	35566772	chr1:35557472-35566772	1	+	35559124	35565663	789624	7	411,141,969,242,225,143,1546,	0,1634,2853,4919,5729,6294,7754,
#Partially deleted in new
chr1	35557791	35566779	chr1:35557791-35566779	3	+	35558190	35565663	789624	8	92,68,141,969,242,225,143,1553,	0,364,1315,2534,4600,5410,5975,7435,
#Partially deleted in new
chr1	35557807	35566773	chr1:35557807-35566773	1	+	35558190	35565663	789624	7	416,141,969,242,225,143,1547,	0,1299,2518,4584,5394,5959,7419,
#Deleted in new
chr1	35557830	35560843	chr1:35557830-35560843	0	+	35557830	35557830	8553170	4	53,329,141,518,	0,325,1276,2495,
#Deleted in new
chr1	35558505	35560934	chr1:35558505-35560934	0	+	35559124	35560934	789624	3	180,141,609,	0,601,1820,
#Partially deleted in new
chr1	35562467	35567274	chr1:35562467-35567274	0	+	35562467	35566869	789624	4	166,225,143,452,	0,734,1299,4355,
#Partially deleted in new
chr1	35569812	35573747	chr1:35569812-35573747	0	-	35569812	35569812	8553170	2	107,176,	0,3759,
#Partially deleted in new
chr1	35569814	35577729	chr1:35569814-35577729	3	-	35569814	35569814	8553170	3	105,339,408,	0,4545,7507,
#Partially deleted in new
chr1	35573369	35595328	chr1:35573369-35595328	3	+	35573577	35594676	789624	7	235,483,52,223,119,142,935,	0,557,1579,14960,16560,17264,21024,
#Partially deleted in new
chr1	35577735	35595261	chr1:35577735-35595261	0	+	35577735	35577735	8553170	5	27,223,119,142,868,	0,10594,12194,12898,16658,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	35599543	35631537	chr1:35599543-35631537	1	-	35603266	35609342	789624	5	3831,50,163,71,102,	0,5689,9702,31730,31892,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	35601583	35641844	chr1:35601583-35641844	3	-	35603266	35641432	0	6	1791,50,163,71,123,503,	0,3649,7662,29690,34726,39758,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	35602633	35631537	chr1:35602633-35631537	0	-	35602633	35602633	8553170	5	741,50,163,71,102,	0,2599,6612,28640,28802,
#Partially deleted in new
chr1	35713874	35719472	chr1:35713874-35719472	3	-	35715631	35716321	789624	2	2452,766,	0,4832,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	35716159	35716911	chr1:35716159-35716911	0	-	35716159	35716159	8553170	2	167,411,	0,341,
#Partially deleted in new
chr1	35716197	35718894	chr1:35716197-35718894	0	-	35716197	35716197	8553170	3	129,175,188,	0,303,2509,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr1	35720217	35769967	chr1:35720217-35769967	1	-	35720890	35769870	789624	25	763,162,83,106,128,122,165,101,76,112,227,155,200,65,179,257,192,575,109,73,78,162,449,109,121,	0,16696,17121,17774,18237,18918,19147,22923,23237,25233,26548,27689,28187,29249,29415,31032,33527,40124,40878,41780,42186,42942,44048,45000,49629,
#Deleted in new
chr1	35736280	35737843	chr1:35736280-35737843	0	-	35736280	35736280	8553170	4	326,162,83,146,	0,633,1058,1417,
#Partially deleted in new
chr1	35736404	35769928	chr1:35736404-35769928	3	-	35736495	35769870	789624	25	202,162,83,106,128,122,165,101,76,112,227,155,200,65,179,257,192,575,109,73,78,162,449,109,82,	0,509,934,1587,2050,2731,2960,6736,7050,9046,10361,11502,12000,13062,13228,14845,17340,23937,24691,25593,25999,26755,27861,28813,33442,
#Partially deleted in new
chr1	35736404	35769928	chr1:35736404-35769928	1	-	35736495	35769870	789624	24	202,162,83,106,128,122,165,101,76,112,227,155,200,65,179,257,575,109,73,78,162,449,109,82,	0,509,934,1587,2050,2731,2960,6736,7050,9046,10361,11502,12000,13062,13228,14845,23937,24691,25593,25999,26755,27861,28813,33442,
#Partially deleted in new
chr1	35736404	35769928	chr1:35736404-35769928	1	-	35736495	35769870	789624	25	202,162,83,106,128,122,165,101,76,112,227,155,200,65,20,257,192,575,109,73,78,162,449,109,82,	0,509,934,1587,2050,2731,2960,6736,7050,9046,10361,11502,12000,13062,13228,14845,17340,23937,24691,25593,25999,26755,27861,28813,33442,
#Partially deleted in new
chr1	35739388	35743576	chr1:35739388-35743576	3	+	35739388	35739388	8553170	2	125,414,	0,3774,
#Partially deleted in new
chr1	35746964	35748774	chr1:35746964-35748774	0	-	35746964	35746964	8553170	3	28,155,370,	0,942,1440,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	35808171	35857890	chr1:35808171-35857890	3	+	35808416	35853605	789624	18	264,166,121,182,137,135,88,148,120,129,134,185,160,316,135,102,200,4394,	0,8710,14690,17141,17507,17754,18576,23255,23640,23885,24265,25818,27662,32993,33444,41985,42682,45325,
#Partially deleted in new
chr1	35841672	35851195	chr1:35841672-35851195	0	+	35841672	35841672	8553170	3	78,102,342,	0,8484,9181,
#Deleted in new
chr1	35853487	35854758	chr1:35853487-35854758	0	+	35853487	35853487	8553170	2	215,82,	0,1189,
#Partially deleted in new
chr1	35869807	35920958	chr1:35869807-35920958	1	+	35892572	35919607	789624	19	96,184,121,182,137,135,88,148,120,123,134,185,160,91,195,135,102,200,1460,	0,18619,22749,23289,23866,24229,24507,25314,31666,32140,32396,37127,44034,44376,45540,47785,48514,49247,49691,
#Deleted in new
chr1	35873269	35873752	chr1:35873269-35873752	7	-	35873269	35873269	16724991	1	483,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	35883208	35930528	chr1:35883208-35930528	3	+	35883421	35919607	0	19	238,184,121,182,137,135,88,148,120,123,134,185,160,91,195,135,102,200,11030,	0,5218,9348,9888,10465,10828,11106,11913,18265,18739,18995,23726,30633,30975,32139,34384,35113,35846,36290,
#Partially deleted in new
chr1	35892579	35920019	chr1:35892579-35920019	0	+	35892579	35893712	789624	17	98,182,219,135,88,148,120,123,134,185,160,91,195,135,102,200,521,	0,517,1012,1457,1735,2542,8894,9368,9624,14355,21262,21604,22768,25013,25742,26475,26919,
#Deleted in new
chr1	35929719	35930115	chr1:35929719-35930115	3	-	35929719	35929719	8553170	1	396,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	35930717	35983409	chr1:35930717-35983409	1	+	35931426	35982652	789624	7	81,217,172,121,209,137,789,	0,511,14974,36237,41306,42657,51903,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	35931077	36072500	chr1:35931077-36072500	3	+	35931426	36055745	0	19	368,172,121,209,137,135,88,148,120,123,134,185,160,91,195,135,102,200,16864,	0,14614,35877,40946,42297,73263,77612,77819,78397,82552,82837,96036,103096,105099,108712,109229,112369,123868,124559,
#Partially deleted in new
chr1	35931081	35982652	chr1:35931081-35982652	1	+	35931426	35982652	789624	6	364,172,121,209,137,32,	0,14610,35873,40942,42293,51539,
#Partially deleted in new
chr1	35931094	36056239	chr1:35931094-36056239	0	+	35931426	35972027	789624	21	351,172,209,137,92,79,135,140,88,148,120,123,134,185,160,91,195,135,102,200,603,	0,14597,40929,42280,51526,53375,73246,74624,77595,77802,78380,82535,82820,96019,103079,105082,108695,109212,112352,123851,124542,
#Partially deleted in new
chr1	35931257	36056462	chr1:35931257-36056462	1	+	36004384	36055745	0	17	188,172,209,135,88,148,120,123,134,185,160,91,195,135,102,200,826,	0,14434,40766,73083,77432,77639,78217,82372,82657,95856,102916,104919,108532,109049,112189,123688,124379,
#Partially deleted in new
chr1	35966954	35973592	chr1:35966954-35973592	0	+	35966954	35966954	8553170	3	121,209,218,	0,5069,6420,
#Partially deleted in new
chr1	35992108	36013517	chr1:35992108-36013517	3	-	35992108	35992108	8553170	3	200,74,93,	0,11909,21316,
#Partially deleted in new
chr1	36009380	36013630	chr1:36009380-36013630	1	-	36009380	36009380	8553170	2	179,206,	0,4044,
#Partially deleted in new
chr1	36043263	36055262	chr1:36043263-36055262	0	+	36043263	36043263	8553170	2	285,317,	0,11682,
#Partially deleted in new
chr1	36080065	36084026	chr1:36080065-36084026	7	-	36080065	36080065	16724991	3	1446,177,51,	0,2160,3910,
#Partially deleted in new
chr1	36080319	36081217	chr1:36080319-36081217	5	-	36080319	36080319	16724991	1	898,	0,
#Partially deleted in new
chr1	36084074	36088275	chr1:36084074-36088275	3	+	36084921	36088186	789624	10	75,208,126,206,144,115,108,144,80,303,	0,795,1088,1761,2629,2856,3129,3364,3653,3898,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	36084337	36088275	chr1:36084337-36088275	0	+	36084921	36085749	789624	10	173,208,126,337,144,115,108,144,80,303,	0,532,825,1367,2366,2593,2866,3101,3390,3635,
#Partially deleted in new
chr1	36087250	36088275	chr1:36087250-36088275	0	+	36087250	36087811	789624	3	61,144,548,	0,188,477,
#Partially deleted in new
chr1	36088874	36093932	chr1:36088874-36093932	3	+	36088904	36093386	0	6	241,97,208,185,101,836,	0,2369,2743,3035,3547,4222,
#Partially deleted in new
chr1	36095235	36125220	chr1:36095235-36125220	3	-	36097568	36100242	789624	4	4252,209,45,164,	0,4814,20472,29821,
#Deleted in new
chr1	36095240	36100249	chr1:36095240-36100249	1	-	36097568	36100242	789624	2	4247,200,	0,4809,
#Deleted in new
chr1	36097506	36100249	chr1:36097506-36100249	1	-	36097568	36099485	789624	2	1981,55,	0,2688,
#Partially deleted in new
chr1	36136569	36149514	chr1:36136569-36149514	1	-	36137202	36149378	789624	3	753,183,178,	0,1226,12767,
#Partially deleted in new
chr1	36136569	36149514	chr1:36136569-36149514	1	-	36137202	36149378	789624	5	753,183,124,98,178,	0,1226,3150,3499,12767,
#Partially deleted in new
chr1	36136569	36156053	chr1:36136569-36156053	1	-	36137202	36140070	0	5	753,183,100,98,171,	0,1226,3150,3499,19313,
#Partially deleted in new
chr1	36136571	36149469	chr1:36136571-36149469	3	-	36137202	36149378	0	5	751,183,100,98,133,	0,1224,3148,3497,12765,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	36136580	36140998	chr1:36136580-36140998	0	-	36136580	36136580	8553170	3	1398,100,930,	0,3139,3488,
#Partially deleted in new
chr1	36136944	36149451	chr1:36136944-36149451	1	-	36137202	36140070	0	5	378,183,100,98,192,	0,851,2775,3124,12315,
#Partially deleted in new
chr1	36137053	36149497	chr1:36137053-36149497	1	-	36137202	36140070	0	5	269,183,100,98,406,	0,742,2666,3015,12038,
#Partially deleted in new
chr1	36137261	36149496	chr1:36137261-36149496	0	-	36137261	36137261	8553170	2	61,160,	0,12075,
#Partially deleted in new
chr1	36137895	36149496	chr1:36137895-36149496	1	-	36138115	36149378	789624	5	83,149,100,98,160,	0,188,1824,2173,11441,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	36139398	36149287	chr1:36139398-36149287	0	-	36139398	36139398	8553170	3	421,98,196,	0,670,9693,
#Partially deleted in new
chr1	36155578	36175008	chr1:36155578-36175008	0	+	36171041	36175008	789624	6	155,345,69,164,115,111,	0,15392,15934,16885,17785,19319,
#Partially deleted in new
chr1	36155964	36180849	chr1:36155964-36180849	1	+	36156417	36180258	789624	16	499,345,69,164,115,383,146,329,178,139,105,54,43,91,194,602,	0,15006,15548,16499,17399,20234,20732,21908,22454,22720,22956,23297,23550,23701,23909,24283,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	36156174	36171823	chr1:36156174-36171823	0	+	36156174	36156174	8553170	3	289,345,311,	0,14796,15338,
#Partially deleted in new
chr1	36156197	36180849	chr1:36156197-36180849	1	+	36156417	36180258	789624	18	266,345,69,164,115,111,123,164,146,329,178,139,105,54,43,91,194,602,	0,14773,15315,16266,17166,18700,20001,20220,20499,21675,22221,22487,22723,23064,23317,23468,23676,24050,
#Partially deleted in new
chr1	36156201	36180840	chr1:36156201-36180840	3	+	36156417	36180258	789624	17	262,345,69,164,115,111,383,146,329,178,139,105,54,46,91,194,593,	0,14769,15311,16262,17162,18696,19997,20495,21671,22217,22483,22719,23060,23310,23464,23672,24046,
#Partially deleted in new
chr1	36157214	36172540	chr1:36157214-36172540	0	+	36171041	36172540	789624	4	76,345,69,77,	0,13756,14298,15249,
#Deleted in new
chr1	36171967	36173479	chr1:36171967-36173479	0	+	36171967	36171967	8553170	2	660,116,	0,1396,
#Deleted in new
chr1	36172468	36176834	chr1:36172468-36176834	0	+	36172468	36172468	8553170	5	159,115,111,383,138,	0,895,2429,3730,4228,
#Partially deleted in new
chr1	36176716	36178822	chr1:36176716-36178822	0	+	36176716	36178822	789624	4	126,329,151,138,	0,1156,1729,1968,
#Partially deleted in new
chr1	36176805	36179022	chr1:36176805-36179022	0	+	36176805	36176805	8553170	5	37,329,126,139,102,	0,1067,1665,1879,2115,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	36177468	36180832	chr1:36177468-36180832	0	+	36177468	36177468	8553170	10	106,329,151,139,105,54,43,91,194,585,	0,404,977,1216,1452,1793,2046,2197,2405,2779,
#Deleted in new
chr1	36178410	36179724	chr1:36178410-36179724	0	+	36178410	36178410	8553170	4	615,54,43,59,	0,851,1104,1255,
#Deleted in new
chr1	36179020	36180315	chr1:36179020-36180315	0	+	36179020	36179020	8553170	4	537,91,194,68,	0,645,853,1227,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	36191914	36192170	chr1:36191914-36192170	3	+	36191914	36191914	8553170	1	256,	0,
#Partially deleted in new
chr1	36224415	36305357	chr1:36224415-36305357	3	+	36282563	36304017	789624	12	90,103,168,903,705,173,112,85,188,199,144,1562,	0,34966,58117,61952,64644,66958,68182,69435,72167,76470,77137,79380,
#Partially deleted in new
chr1	36224431	36304148	chr1:36224431-36304148	1	+	36282563	36304017	789624	13	74,132,103,168,903,705,173,112,85,188,199,144,353,	0,539,34950,58101,61936,64628,66942,68166,69419,72151,76454,77121,79364,
#Partially deleted in new
chr1	36224432	36305357	chr1:36224432-36305357	1	+	36282563	36304524	8553170	14	73,52,103,168,903,705,173,112,85,188,199,144,36,884,	0,979,34949,58100,61935,64627,66941,68165,69418,72150,76453,77120,79363,80041,
#Deleted in new
chr1	36241897	36242156	chr1:36241897-36242156	7	-	36241897	36241897	16724991	1	259,	0,
#Partially deleted in new
chr1	36289717	36294169	chr1:36289717-36294169	0	+	36289717	36289717	8553170	5	47,173,112,85,120,	0,1656,2880,4133,4332,
#Partially deleted in new
chr1	36306386	36321230	chr1:36306386-36321230	2	+	36306420	36321127	789624	16	38,158,64,119,91,56,46,101,87,43,94,53,95,1124,64,175,	0,211,455,780,1130,1383,1531,1722,2002,3161,12684,12873,13055,13288,14528,14669,
#Partially deleted in new
chr1	36307109	36321230	chr1:36307109-36321230	1	+	36307273	36321127	789624	13	176,91,56,46,101,87,43,94,53,95,1124,64,175,	0,407,660,808,999,1279,2438,11961,12150,12332,12565,13805,13946,
#Partially deleted in new
chr1	36307116	36324886	chr1:36307116-36324886	0	+	36307273	36319699	789624	12	169,91,56,87,43,94,1124,64,154,55,298,947,	0,400,653,1272,2431,11954,12558,13798,13939,14607,15250,16823,
#Partially deleted in new
chr1	36307127	36309592	chr1:36307127-36309592	0	+	36307127	36307127	8553170	4	158,56,87,82,	0,642,1261,2383,
#Deleted in new
chr1	36319255	36320751	chr1:36319255-36320751	0	+	36319255	36319255	8553170	2	57,1077,	0,419,
#Deleted in new
chr1	36320039	36323965	chr1:36320039-36323965	0	+	36320039	36320039	8553170	5	759,64,723,301,196,	0,875,1016,2324,3730,
#Deleted in new
chr1	36322030	36324154	chr1:36322030-36324154	3	-	36322294	36323037	789624	3	695,97,262,	0,940,1862,
#Deleted in new
chr1	36322280	36323615	chr1:36322280-36323615	0	-	36322280	36322280	8553170	3	445,97,157,	0,690,1178,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	36323733	36329221	chr1:36323733-36329221	3	+	36323733	36323733	8553170	2	336,1502,	0,3986,
#Partially deleted in new
chr1	36339623	36361340	chr1:36339623-36361340	1	-	36343198	36361332	0	9	3825,120,145,116,53,228,144,86,120,	0,4236,4496,9076,14740,15582,18615,19113,21597,
#Partially deleted in new
chr1	36339623	36385884	chr1:36339623-36385884	1	-	36341754	36361332	0	12	2350,85,120,145,116,53,228,144,86,120,237,162,	0,3740,4236,4496,9076,14740,15582,18615,19113,21597,28224,46099,
#Partially deleted in new
chr1	36339623	36385888	chr1:36339623-36385888	1	-	36341754	36361332	0	11	2350,85,120,145,116,53,228,144,101,120,166,	0,3740,4236,4496,9076,14740,15582,18615,19113,21597,46099,
#Partially deleted in new
chr1	36339623	36385896	chr1:36339623-36385896	3	-	36341754	36361332	0	11	2350,85,120,145,116,53,228,144,86,120,174,	0,3740,4236,4496,9076,14740,15582,18615,19113,21597,46099,
#Partially deleted in new
chr1	36355204	36366072	chr1:36355204-36366072	0	-	36355204	36355204	8553170	5	229,144,86,120,102,	0,3034,3532,6016,10766,
#Partially deleted in new
chr1	36355252	36362656	chr1:36355252-36362656	0	-	36355252	36355252	8553170	5	181,144,86,120,98,	0,2986,3484,5968,7306,
#Partially deleted in new
chr1	36355288	36385879	chr1:36355288-36385879	0	-	36355288	36355288	8553170	6	145,144,101,120,233,157,	0,2950,3448,5932,12563,30434,
#Partially deleted in new
chr1	36367853	36385876	chr1:36367853-36385876	0	-	36367853	36367853	8553170	3	231,126,154,	0,4795,17869,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	36391237	36397887	chr1:36391237-36397887	0	-	36391237	36391237	8553170	4	367,130,388,121,	0,1120,2528,6529,
#Partially deleted in new
chr1	36393429	36397892	chr1:36393429-36397892	3	-	36393757	36394129	789624	2	724,126,	0,4337,
#Partially deleted in new
chr1	36394013	36397878	chr1:36394013-36397878	0	-	36394013	36394013	8553170	2	140,261,	0,3604,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	36402720	36402859	chr1:36402720-36402859	3	-	36402720	36402720	8553170	1	139,	0,
#Partially deleted in new
chr1	36415826	36422181	chr1:36415826-36422181	0	-	36416047	36422181	789624	4	269,64,140,32,	0,3164,4649,6323,
#Partially deleted in new
chr1	36417905	36450451	chr1:36417905-36450451	3	-	36418138	36450369	789624	10	350,64,140,70,129,104,81,168,155,194,	0,1085,2570,4244,4862,5457,13896,14516,20850,32352,
#Partially deleted in new
chr1	36417905	36423471	chr1:36417905-36423471	0	-	36417905	36417905	8553170	4	350,70,129,109,	0,4244,4862,5457,
#Partially deleted in new
chr1	36417909	36450433	chr1:36417909-36450433	1	-	36418138	36450369	789624	11	346,64,140,70,129,104,81,168,155,30,176,	0,1081,2566,4240,4858,5453,13892,14512,20846,26094,32348,
#Partially deleted in new
chr1	36417910	36419293	chr1:36417910-36419293	0	-	36417910	36417910	8553170	2	345,303,	0,1080,
#Partially deleted in new
chr1	36417942	36440975	chr1:36417942-36440975	1	-	36418138	36438887	789624	10	313,64,140,70,129,104,81,168,155,157,	0,1048,2533,4207,4825,5420,13859,14479,20813,22876,
#Partially deleted in new
chr1	36418059	36450279	chr1:36418059-36450279	0	-	36419015	36450279	789624	9	196,64,70,129,104,81,168,155,22,	0,931,4090,4708,5303,13742,14362,20696,32198,
#Deleted in new
chr1	36418449	36418578	chr1:36418449-36418578	3	-	36418449	36418449	5263520	1	129,	0,
#Deleted in new
chr1	36420332	36422817	chr1:36420332-36422817	0	-	36420332	36420332	8553170	3	283,70,50,	0,1817,2435,
#Deleted in new
chr1	36422001	36422870	chr1:36422001-36422870	0	-	36422001	36422001	8553170	2	218,103,	0,766,
#Partially deleted in new
chr1	36422785	36439000	chr1:36422785-36439000	0	-	36422785	36422785	8553170	5	111,104,81,168,245,	0,577,9016,9636,15970,
#Partially deleted in new
chr1	36428298	36450443	chr1:36428298-36450443	1	-	36428319	36450369	789624	5	177,81,168,155,186,	0,3503,4123,10457,21959,
#Partially deleted in new
chr1	36432568	36450287	chr1:36432568-36450287	0	-	36447876	36450287	789624	4	21,155,75,30,	0,6187,15244,17689,
#Partially deleted in new
chr1	36455717	36464437	chr1:36455717-36464437	3	-	36455787	36464275	0	8	208,192,59,85,49,76,45,292,	0,469,2205,4974,5546,6370,8088,8428,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	36455771	36459703	chr1:36455771-36459703	0	-	36455771	36455771	8553170	3	154,192,1781,	0,415,2151,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	36455772	36456566	chr1:36455772-36456566	0	-	36455772	36455772	8553170	2	153,380,	0,414,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	36455773	36464345	chr1:36455773-36464345	0	-	36455773	36455773	8553170	4	152,192,1204,64,	0,413,2149,8508,
#Partially deleted in new
chr1	36466042	36483278	chr1:36466042-36483278	3	-	36466356	36479496	0	17	866,82,94,141,147,102,189,214,74,154,170,188,124,297,84,60,468,	0,1187,1515,1779,2032,3113,3609,5390,6023,6195,6474,7392,7721,9334,13390,15435,16768,
#Partially deleted in new
chr1	36466042	36483278	chr1:36466042-36483278	1	-	36466095	36479496	0	18	158,207,82,94,141,147,102,189,214,74,154,170,188,124,297,84,60,468,	0,578,1187,1515,1779,2032,3113,3609,5390,6023,6195,6474,7392,7721,9334,13390,15435,16768,
#Partially deleted in new
chr1	36466042	36483278	chr1:36466042-36483278	1	-	36466356	36479496	0	17	785,82,94,141,147,102,189,214,74,154,170,188,124,297,84,60,468,	0,1187,1515,1779,2032,3113,3609,5390,6023,6195,6474,7392,7721,9334,13390,15435,16768,
#Partially deleted in new
chr1	36466043	36479519	chr1:36466043-36479519	1	-	36466356	36479496	0	15	784,82,94,141,147,102,189,214,74,154,170,188,124,297,87,	0,1186,1514,1778,2031,3112,3608,5389,6022,6194,6473,7391,7720,9333,13389,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	36466043	36476327	chr1:36466043-36476327	0	-	36466043	36466043	8553170	9	1268,94,1436,189,707,154,1106,169,951,	0,1514,1778,3608,5389,6194,6473,7675,9333,
#Partially deleted in new
chr1	36466082	36471474	chr1:36466082-36471474	0	-	36466356	36471474	789624	7	745,82,94,141,147,189,42,	0,1147,1475,1739,1992,3569,5350,
#Partially deleted in new
chr1	36466095	36479519	chr1:36466095-36479519	1	-	36466095	36479496	0	16	105,207,82,94,141,147,102,189,214,74,154,170,188,124,297,87,	0,525,1134,1462,1726,1979,3060,3556,5337,5970,6142,6421,7339,7668,9281,13337,
#Partially deleted in new
chr1	36466117	36472387	chr1:36466117-36472387	0	-	36466117	36466117	8553170	10	710,82,94,169,147,102,189,214,74,150,	0,1112,1440,1704,1957,3038,3534,5315,5948,6120,
#Deleted in new
chr1	36466581	36468076	chr1:36466581-36468076	0	-	36466581	36466581	8553170	4	246,82,94,255,	0,648,976,1240,
#Deleted in new
chr1	36467228	36467809	chr1:36467228-36467809	0	-	36467228	36467228	8553170	2	83,252,	0,329,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	36468747	36475412	chr1:36468747-36475412	0	-	36468747	36468747	8553170	9	510,189,214,74,154,170,188,124,36,	0,904,2685,3318,3490,3769,4687,5016,6629,
#Partially deleted in new
chr1	36473368	36473830	chr1:36473368-36473830	0	-	36473368	36473368	8553170	2	254,67,	0,395,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	36476982	36482899	chr1:36476982-36482899	0	-	36476982	36476982	8553170	4	695,84,60,89,	0,2450,4495,5828,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	36478913	36482934	chr1:36478913-36482934	0	-	36478913	36478913	8553170	3	603,60,124,	0,2564,3897,
#Partially deleted in new
chr1	36479431	36482051	chr1:36479431-36482051	0	-	36479431	36479496	789624	4	85,94,60,273,	0,555,2046,2347,
#Deleted in new
chr1	36630334	36630857	chr1:36630334-36630857	7	+	36630334	36630334	16724991	1	523,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	36703952	36710582	chr1:36703952-36710582	3	+	36703952	36703952	8553170	2	1364,1330,	0,5300,
#Deleted in new
chr1	36768121	36769725	chr1:36768121-36769725	3	-	36768121	36768121	8553170	2	490,1031,	0,573,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	36773139	36775768	chr1:36773139-36775768	3	+	36773139	36773139	8553170	2	174,289,	0,2340,
#Partially deleted in new
chr1	36795526	37034125	chr1:36795526-37034125	3	-	36801850	37034108	789624	16	6519,251,223,218,119,224,204,114,108,144,174,54,182,258,177,132,	0,9460,10577,21533,24209,30076,46209,54784,58088,63581,64317,74221,76661,85107,95393,238467,
#Partially deleted in new
chr1	36804617	37034129	chr1:36804617-37034129	1	-	36804932	37034108	789624	15	620,223,218,119,224,204,114,108,144,174,54,182,258,177,136,	0,1486,12442,15118,20985,37118,45693,48997,54490,55226,65130,67570,76016,86302,229376,
#Partially deleted in new
chr1	36849673	36859136	chr1:36849673-36859136	0	-	36849673	36849673	8553170	4	307,114,108,29,	0,637,3941,9434,
#Partially deleted in new
chr1	36849947	36853687	chr1:36849947-36853687	0	-	36849947	36849947	8553170	2	477,73,	0,3667,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	37133488	37136146	chr1:37133488-37136146	3	+	37133488	37133488	8553170	2	119,920,	0,1738,
#Deleted in new
chr1	37161562	37161634	chr1:37161562-37161634	3	+	37161562	37161562	5263520	1	72,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	37203609	37203716	chr1:37203609-37203716	3	+	37203609	37203609	8553170	1	107,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	37262738	37325100	chr1:37262738-37325100	3	-	37262738	37262738	8553170	4	216,147,122,111,	0,7717,13399,62251,
#Deleted in new
chr1	37264676	37264786	chr1:37264676-37264786	7	-	37264676	37264676	16724991	1	110,	0,
#Deleted in new
chr1	37330851	37330996	chr1:37330851-37330996	7	+	37330851	37330851	16724991	1	145,	0,
#Deleted in new
chr1	37474551	37484379	chr1:37474551-37484379	3	+	37475496	37483611	0	6	78,481,140,235,107,1643,	0,907,5738,7049,7882,8185,
#Deleted in new
chr1	37474579	37484360	chr1:37474579-37484360	0	+	37475496	37482383	789624	6	50,481,140,235,191,1624,	0,879,5710,7021,7770,8157,
#Deleted in new
chr1	37479998	37481762	chr1:37479998-37481762	0	+	37479998	37479998	8553170	2	431,162,	0,1602,
#Deleted in new
chr1	37480229	37480289	chr1:37480229-37480289	3	+	37480229	37480229	5263520	1	60,	0,
#Deleted in new
chr1	37481689	37482602	chr1:37481689-37482602	0	+	37481689	37482602	789624	2	146,249,	0,664,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	37492574	37514763	chr1:37492574-37514763	3	-	37494098	37514746	789624	8	1533,34,30,193,46,88,116,107,	0,3310,4132,9229,16703,16880,20848,22082,
#Partially deleted in new
chr1	37493177	37514774	chr1:37493177-37514774	1	-	37494098	37514746	789624	7	930,34,193,46,88,116,118,	0,2707,8626,16100,16277,20245,21479,
#Partially deleted in new
chr1	37493310	37514269	chr1:37493310-37514269	1	-	37494098	37513562	789624	6	797,34,193,46,88,847,	0,2574,8493,15967,16144,20112,
#Partially deleted in new
chr1	37493334	37514756	chr1:37493334-37514756	0	-	37493334	37493334	789624	8	773,34,58,193,46,88,116,100,	0,2550,3212,8469,15943,16120,20088,21322,
#Partially deleted in new
chr1	37493397	37514732	chr1:37493397-37514732	0	-	37493397	37493397	789624	9	710,34,58,30,193,46,88,116,76,	0,2487,3149,3309,8406,15880,16057,20025,21259,
#Partially deleted in new
chr1	37493761	37514763	chr1:37493761-37514763	1	-	37493768	37514746	789624	6	53,193,46,88,116,107,	0,8042,15516,15693,19661,20895,
#Partially deleted in new
chr1	37493933	37514667	chr1:37493933-37514667	0	-	37493933	37493933	8553170	8	174,34,30,193,46,88,116,151,	0,1951,2773,7870,15344,15521,19489,20583,
#Partially deleted in new
chr1	37495873	37514746	chr1:37495873-37514746	1	-	37496591	37514746	789624	8	45,58,30,193,46,88,116,90,	0,673,833,5930,13404,13581,17549,18783,
#Partially deleted in new
chr1	37500934	37500994	chr1:37500934-37500994	3	-	37500934	37500934	5263520	1	60,	0,
#Partially deleted in new
chr1	37501414	37513520	chr1:37501414-37513520	0	-	37501414	37501414	8553170	4	582,46,88,98,	0,7863,8040,12008,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	37534448	37554344	chr1:37534448-37554344	3	-	37537747	37554229	789624	4	3564,599,103,339,	0,5708,18196,19557,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	37536689	37541594	chr1:37536689-37541594	0	-	37536689	37536689	8553170	2	1323,1438,	0,3467,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	37538007	37554248	chr1:37538007-37554248	0	-	37548921	37554229	789624	5	5,599,167,103,57,	0,2149,10813,14637,16184,
#Deleted in new
chr1	37544762	37545294	chr1:37544762-37545294	7	+	37544762	37544762	16724991	1	532,	0,
#Deleted in new
chr1	37552486	37554290	chr1:37552486-37554290	0	-	37552486	37552486	8553170	2	261,285,	0,1519,
#Deleted in new
chr1	37556246	37556499	chr1:37556246-37556499	7	+	37556246	37556246	16724991	1	253,	0,
#Partially deleted in new
chr1	37556918	37566857	chr1:37556918-37566857	3	+	37556928	37565061	789624	6	157,146,170,179,165,1832,	0,684,2408,4638,5162,8107,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	37556952	37558191	chr1:37556952-37558191	0	+	37556952	37556952	8553170	2	123,589,	0,650,
#Partially deleted in new
chr1	37556997	37562188	chr1:37556997-37562188	0	+	37556997	37556997	8553170	4	78,146,179,108,	0,605,4559,5083,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	37560537	37566856	chr1:37560537-37566856	0	+	37560537	37560537	8553170	2	1708,1831,	0,4488,
#Partially deleted in new
chr1	37561400	37565146	chr1:37561400-37565146	0	+	37561400	37561400	8553170	3	335,165,121,	0,680,3625,
#Partially deleted in new
chr1	37566815	37595921	chr1:37566815-37595921	3	-	37566854	37595822	789624	16	192,92,83,452,114,159,105,129,114,159,67,185,140,95,85,163,	0,857,1459,2035,7527,7849,8779,9612,15407,15962,17051,20495,23890,25896,26946,28943,
#Deleted in new
chr1	37566815	37568115	chr1:37566815-37568115	0	-	37566815	37566815	8553170	2	192,443,	0,857,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	37566816	37570893	chr1:37566816-37570893	0	-	37566816	37566816	8553170	4	191,92,83,2043,	0,856,1458,2034,
#Deleted in new
chr1	37566820	37568417	chr1:37566820-37568417	0	-	37566820	37566820	8553170	3	187,92,143,	0,852,1454,
#Partially deleted in new
chr1	37575594	37582923	chr1:37575594-37582923	0	-	37575594	37582923	789624	5	105,129,204,114,146,	0,833,5747,6628,7183,
#Partially deleted in new
chr1	37576169	37582809	chr1:37576169-37582809	0	-	37576169	37576169	8553170	3	387,114,32,	0,6053,6608,
#Deleted in new
chr1	37582275	37583346	chr1:37582275-37583346	0	-	37582275	37582275	8553170	2	61,569,	0,502,
#Partially deleted in new
chr1	37590778	37594092	chr1:37590778-37594092	0	-	37590778	37590778	8553170	3	67,95,331,	0,1933,2983,
#Partially deleted in new
chr1	37593484	37595935	chr1:37593484-37595935	0	-	37593484	37593484	8553170	2	362,177,	0,2274,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	37596125	37607336	chr1:37596125-37607336	3	+	37596125	37596125	8553170	2	213,1113,	0,10098,
#Partially deleted in new
chr1	37611349	37634665	chr1:37611349-37634665	1	-	37612754	37629661	0	6	1572,150,192,382,67,100,	0,2834,5134,18218,20937,23216,
#Partially deleted in new
chr1	37611349	37634665	chr1:37611349-37634665	1	-	37612754	37629901	0	7	1572,189,150,192,61,67,100,	0,2354,2834,5134,18539,20937,23216,
#Partially deleted in new
chr1	37611638	37634923	chr1:37611638-37634923	3	-	37612754	37629661	0	7	1283,189,150,192,382,67,358,	0,2065,2545,4845,17929,20648,22927,
#Partially deleted in new
chr1	37611811	37634616	chr1:37611811-37634616	1	-	37612754	37629661	0	8	1110,189,150,192,382,179,67,51,	0,1892,2372,4672,17756,20032,20475,22754,
#Partially deleted in new
chr1	37681569	37690520	chr1:37681569-37690520	3	-	37683122	37689880	789624	5	1591,119,180,278,187,	0,1749,4703,8036,8764,
#Partially deleted in new
chr1	37681569	37692216	chr1:37681569-37692216	0	-	37686333	37689880	789624	7	1591,158,180,226,105,123,187,	0,1749,4703,8088,8764,9889,10460,
#Deleted in new
chr1	37681570	37684192	chr1:37681570-37684192	0	-	37681570	37681570	8553170	1	2622,	0,
#Partially deleted in new
chr1	37682735	37689689	chr1:37682735-37689689	0	-	37682735	37682735	8553170	4	425,123,180,84,	0,583,3537,6870,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	37683110	37690504	chr1:37683110-37690504	1	-	37683122	37689880	789624	5	50,119,180,281,289,	0,208,3162,6495,7105,
#Partially deleted in new
chr1	37683318	37692223	chr1:37683318-37692223	0	-	37683318	37689880	789624	4	119,180,278,35,	0,2954,6287,8870,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	37686272	37690520	chr1:37686272-37690520	0	-	37686272	37689880	789624	3	180,278,305,	0,3333,3943,
#Partially deleted in new
chr1	37686301	37692205	chr1:37686301-37692205	0	-	37686301	37689880	789624	3	151,281,176,	0,3304,5728,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	37686386	37690509	chr1:37686386-37690509	0	-	37686386	37689880	789624	3	66,278,508,	0,3219,3615,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	37689532	37690513	chr1:37689532-37690513	0	-	37689532	37689532	8553170	2	351,298,	0,683,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	37689605	37692242	chr1:37689605-37692242	0	-	37689605	37689880	789624	3	281,223,213,	0,610,2424,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	37689645	37690482	chr1:37689645-37690482	0	-	37689645	37689645	8553170	2	241,481,	0,356,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	37689767	37692249	chr1:37689767-37692249	0	-	37689767	37689880	789624	3	116,219,224,	0,448,2258,
#Partially deleted in new
chr1	37691047	37692242	chr1:37691047-37692242	0	-	37691047	37691047	8553170	2	534,213,	0,982,
#Partially deleted in new
chr1	37692417	37709719	chr1:37692417-37709719	3	+	37692690	37708366	0	10	367,129,41,73,86,65,96,127,87,1398,	0,487,3492,6487,8018,9336,10834,13023,14560,15904,
#Partially deleted in new
chr1	37692480	37709713	chr1:37692480-37709713	1	+	37692690	37708366	0	11	98,109,129,41,73,86,65,96,127,87,1392,	0,195,424,3429,6424,7955,9273,10771,12960,14497,15841,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	37713879	37731494	chr1:37713879-37731494	0	-	37721700	37731494	789624	16	218,160,143,109,156,101,100,149,204,62,186,127,126,62,109,84,	0,851,1975,4498,4781,5073,5628,6029,6471,6903,7780,8925,9161,9431,13222,17531,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	37713885	37731573	chr1:37713885-37731573	0	-	37718799	37731573	789624	14	212,160,143,111,156,100,150,204,62,186,126,62,109,163,	0,845,1969,4490,4775,5622,6023,6465,6897,7774,9155,9425,13216,17525,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	37713887	37752906	chr1:37713887-37752906	0	-	37722273	37752906	789624	17	136,160,143,111,156,100,150,204,62,186,291,126,62,109,172,134,31,	0,843,1967,4488,4773,5620,6021,6463,6895,7772,8118,9153,9423,13214,17523,21369,38988,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	37713892	37715020	chr1:37713892-37715020	0	-	37713892	37713892	8553170	2	131,290,	0,838,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	37714853	37756691	chr1:37714853-37756691	0	-	37714853	37714853	8553170	15	37,143,109,156,194,150,204,62,186,126,62,109,172,134,156,	0,1001,3524,3807,4560,5055,5497,5929,6806,8187,8457,12248,16557,20403,41682,
#Partially deleted in new
chr1	37715853	37765066	chr1:37715853-37765066	1	-	37715975	37765066	789624	18	144,111,156,194,150,204,62,186,126,62,109,172,134,351,156,679,65,106,	0,2522,2807,3560,4055,4497,4929,5806,7187,7457,11248,15557,19403,37022,38361,45551,46931,49107,
#Partially deleted in new
chr1	37715973	37765066	chr1:37715973-37765066	3	-	37718371	37765066	789624	17	2513,156,194,150,204,62,186,126,62,109,172,134,351,156,679,65,106,	0,2687,3440,3935,4377,4809,5686,7067,7337,11128,15437,19283,36902,38241,45431,46811,48987,
#Partially deleted in new
chr1	37720678	37721857	chr1:37720678-37721857	0	-	37720678	37720678	8553170	2	166,198,	0,981,
#Partially deleted in new
chr1	37722273	37752969	chr1:37722273-37752969	1	-	37722273	37731558	789624	7	23,126,62,109,172,134,94,	0,767,1037,4828,9137,12983,30602,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	37727192	37752994	chr1:37727192-37752994	0	-	37734663	37752994	789624	5	18,172,108,134,119,	0,4218,7387,8064,25683,
#Partially deleted in new
chr1	37737954	37738054	chr1:37737954-37738054	3	-	37737954	37737954	8553170	1	100,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	37760271	37765133	chr1:37760271-37765133	1	-	37761366	37765066	789624	3	1812,65,173,	0,2513,4689,
#Partially deleted in new
chr1	37776669	37779418	chr1:37776669-37779418	7	+	37776669	37776669	16724991	2	592,1300,	0,1449,
#Partially deleted in new
chr1	37782456	37782885	chr1:37782456-37782885	7	-	37782456	37782456	16724991	1	429,	0,
#Partially deleted in new
chr1	37793801	37801133	chr1:37793801-37801133	3	+	37794182	37800203	789624	4	931,110,77,1567,	0,1935,2942,5765,
#Partially deleted in new
chr1	37793882	37801133	chr1:37793882-37801133	1	+	37794182	37799859	789624	4	850,110,77,1290,	0,1854,2861,5961,
#Partially deleted in new
chr1	37794482	37800221	chr1:37794482-37800221	0	+	37794482	37799599	789624	3	250,110,655,	0,1254,5084,
#Partially deleted in new
chr1	37795407	37800448	chr1:37795407-37800448	1	+	37795768	37800203	789624	4	225,110,77,882,	0,329,1336,4159,
#Partially deleted in new
chr1	37795487	37801137	chr1:37795487-37801137	1	+	37795775	37800203	789624	2	359,1571,	0,4079,
#Deleted in new
chr1	37799719	37800879	chr1:37799719-37800879	3	-	37799719	37799719	8553170	2	450,250,	0,910,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	37802943	37808185	chr1:37802943-37808185	3	-	37803924	37808180	789624	5	1054,143,120,115,394,	0,1358,3913,4157,4848,
#Deleted in new
chr1	37806978	37809452	chr1:37806978-37809452	1	+	37808684	37809073	789624	2	1754,475,	0,1999,
#Deleted in new
chr1	37807659	37808732	chr1:37807659-37808732	0	+	37807659	37807659	8553170	2	21,202,	0,871,
#Deleted in new
chr1	37807746	37809449	chr1:37807746-37809449	1	+	37808684	37809073	789624	3	560,202,472,	0,784,1231,
#Deleted in new
chr1	37808145	37809454	chr1:37808145-37809454	3	+	37808404	37809073	789624	3	294,202,477,	0,385,832,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	37809566	37859620	chr1:37809566-37859620	3	-	37815135	37857658	789624	11	6000,64,596,103,78,137,74,132,239,459,90,	0,7852,12554,14143,22678,25512,26104,29058,30353,47684,49964,
#Deleted in new
chr1	37840985	37841676	chr1:37840985-37841676	7	+	37840985	37840985	16724991	1	691,	0,
#Partially deleted in new
chr1	37857348	37858539	chr1:37857348-37858539	0	-	37857348	37857348	8553170	2	361,52,	0,1139,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr1	37860696	37947057	chr1:37860696-37947057	1	-	37862314	37946308	0	24	1734,112,128,85,114,236,163,111,136,110,112,188,117,115,102,168,97,381,111,30,98,95,83,68,	0,3615,5064,5762,7804,12233,13296,14909,17491,19388,22110,24941,26191,26654,27546,28860,30661,70976,79991,82943,83099,85059,85555,86293,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	37860696	37931749	chr1:37860696-37931749	1	-	37862314	37931712	0	18	1734,112,128,85,114,236,163,111,136,110,112,188,117,115,102,168,97,77,	0,3615,5064,5762,7804,12233,13296,14909,17491,19388,22110,24941,26191,26654,27546,28860,30661,70976,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	37860696	37861580	chr1:37860696-37861580	3	+	37860696	37860696	8553170	2	395,86,	0,798,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	37860696	37947021	chr1:37860696-37947021	1	-	37862370	37946308	789624	20	1734,236,163,111,136,110,112,188,117,115,102,168,97,141,111,30,98,95,83,32,	0,12233,13296,14909,17491,19388,22110,24941,26191,26654,27546,28860,30661,71216,79991,82943,83099,85059,85555,86293,
#Partially deleted in new
chr1	37862067	37946309	chr1:37862067-37946309	1	-	37862314	37946308	0	23	363,112,128,85,114,236,163,111,136,110,112,188,117,115,102,168,97,381,111,30,98,95,58,	0,2244,3693,4391,6433,10862,11925,13538,16120,18017,20739,23570,24820,25283,26175,27489,29290,69605,78620,81572,81728,83688,84184,
#Partially deleted in new
chr1	37862084	37947051	chr1:37862084-37947051	3	-	37862314	37946308	0	24	346,112,128,85,114,236,163,111,136,110,112,188,117,115,102,168,97,141,111,30,98,95,83,62,	0,2227,3676,4374,6416,10845,11908,13521,16103,18000,20722,23553,24803,25266,26158,27472,29273,69828,78603,81555,81711,83671,84167,84905,
#Partially deleted in new
chr1	37862339	37864849	chr1:37862339-37864849	0	-	37862339	37862339	8553170	2	91,538,	0,1972,
#Partially deleted in new
chr1	37868500	37873387	chr1:37868500-37873387	0	-	37868500	37868500	8553170	2	114,458,	0,4429,
#Deleted in new
chr1	37884236	37884317	chr1:37884236-37884317	3	+	37884236	37884236	8553170	1	81,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	37885022	37885117	chr1:37885022-37885117	3	+	37885022	37885022	8553170	1	95,	0,
#Partially deleted in new
chr1	37885508	37888344	chr1:37885508-37888344	0	-	37885508	37885508	8553170	4	317,117,115,102,	0,1379,1842,2734,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	37928536	37946334	chr1:37928536-37946334	1	-	37931484	37946308	789624	6	3517,111,30,98,95,83,	0,12151,15103,15259,17219,17715,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	37940762	37947051	chr1:37940762-37947051	0	-	37940762	37940762	8553170	7	36,182,30,98,95,83,62,	0,1320,2877,3033,4993,5489,6227,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	37953507	37953780	chr1:37953507-37953780	3	+	37953507	37953507	8553170	1	273,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	37956974	37990921	chr1:37956974-37990921	3	-	37958185	37989965	0	17	1289,56,91,111,165,70,108,68,69,139,83,92,73,106,53,48,1052,	0,3145,11069,12379,12596,19909,21745,22013,22490,23611,24754,27194,27732,30598,30809,32573,32895,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	37958062	37960693	chr1:37958062-37960693	0	-	37958062	37958062	8553170	2	201,574,	0,2057,
#Partially deleted in new
chr1	37969386	37979199	chr1:37969386-37979199	0	-	37969386	37969386	8553170	4	78,165,70,480,	0,184,7497,9333,
#Partially deleted in new
chr1	37978722	37989650	chr1:37978722-37989650	0	-	37978722	37978722	8553170	10	105,68,69,139,83,92,73,106,53,103,	0,265,742,1863,3006,5446,5984,8850,9061,10825,
#Partially deleted in new
chr1	37978989	37990075	chr1:37978989-37990075	0	-	37978989	37978989	8553170	8	66,69,139,83,92,73,48,206,	0,475,1596,2739,5179,5717,10558,10880,
#Partially deleted in new
chr1	37979390	37989995	chr1:37979390-37989995	0	-	37979390	37979390	8553170	7	143,139,83,92,73,48,126,	0,1195,2338,4778,5316,10157,10479,
#Partially deleted in new
chr1	37979464	37980789	chr1:37979464-37980789	0	-	37979464	37979464	8553170	2	69,204,	0,1121,
#Partially deleted in new
chr1	37984117	37989973	chr1:37984117-37989973	0	-	37984117	37984117	8553170	6	143,73,106,53,48,104,	0,589,3455,3666,5430,5752,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	37991461	37991569	chr1:37991461-37991569	3	+	37991461	37991461	8553170	1	108,	0,
#Partially deleted in new
chr1	37996769	38005505	chr1:37996769-38005505	3	-	37997404	37999412	0	6	790,187,170,175,176,149,	0,914,1193,2204,2487,8587,
#Partially deleted in new
chr1	37996769	38005502	chr1:37996769-38005502	0	-	37996769	37996769	8553170	5	790,187,170,175,146,	0,914,1193,2204,8587,
#Partially deleted in new
chr1	37997185	38005502	chr1:37997185-38005502	0	-	37997185	37997185	8553170	4	374,187,175,146,	0,498,1788,8171,
#Partially deleted in new
chr1	37997344	38005606	chr1:37997344-38005606	0	-	37997344	37997344	8553170	6	215,187,170,175,176,168,	0,339,618,1629,1912,8094,
#Deleted in new
chr1	37998717	37999432	chr1:37998717-37999432	0	-	37998717	37998717	8553170	2	431,176,	0,539,
#Partially deleted in new
chr1	38009257	38019109	chr1:38009257-38019109	0	+	38009257	38009257	8553170	6	91,152,62,103,114,51,	0,3456,7101,8410,9206,9801,
#Partially deleted in new
chr1	38012733	38016976	chr1:38012733-38016976	0	+	38012733	38012733	8553170	2	132,618,	0,3625,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	38012741	38024824	chr1:38012741-38024824	3	+	38012802	38023628	789624	8	124,62,103,114,94,131,111,1280,	0,3617,4926,5722,6317,6511,9957,10803,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	38016582	38023801	chr1:38016582-38023801	0	+	38016582	38016582	8553170	6	1188,114,94,131,111,257,	0,1881,2476,2670,6116,6962,
#Deleted in new
chr1	38044610	38046794	chr1:38044610-38046794	3	-	38045387	38046743	789624	1	2184,	0,
#Deleted in new
chr1	38080571	38080911	chr1:38080571-38080911	7	-	38080571	38080571	16724991	1	340,	0,
#Deleted in new
chr1	38089230	38089329	chr1:38089230-38089329	3	+	38089230	38089230	5263520	1	99,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	38129463	38140593	chr1:38129463-38140593	3	-	38129463	38129463	8553170	5	1059,114,68,213,108,	0,2753,3606,6737,11022,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	38209033	38214767	chr1:38209033-38214767	3	-	38209033	38209033	789624	4	1789,89,354,51,	0,2700,3064,5683,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	38210657	38214806	chr1:38210657-38214806	0	-	38210657	38210657	8553170	4	165,354,251,90,	0,1440,3607,4059,
#Deleted in new
chr1	38383837	38384422	chr1:38383837-38384422	7	-	38383837	38383837	16724991	1	585,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	38396658	38396765	chr1:38396658-38396765	3	+	38396658	38396658	8553170	1	107,	0,
#Deleted in new
chr1	38474874	38476481	chr1:38474874-38476481	0	+	38474874	38474874	8553170	2	950,289,	0,1318,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	38474878	38496034	chr1:38474878-38496034	3	+	38474878	38474878	8553170	3	946,51,204,	0,18692,20952,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	38474916	38496029	chr1:38474916-38496029	0	+	38474916	38474916	8553170	2	908,199,	0,20914,
#Deleted in new
chr1	38475195	38476484	chr1:38475195-38476484	0	+	38475195	38475195	789624	3	629,63,98,	0,997,1191,
#Deleted in new
chr1	38708930	38710890	chr1:38708930-38710890	7	+	38708930	38708930	16724991	1	1960,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	38754215	38815979	chr1:38754215-38815979	3	-	38754215	38754215	8553170	4	408,182,196,104,	0,2208,30324,61660,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	38754215	38774508	chr1:38754215-38774508	0	-	38754215	38754215	8553170	2	408,32,	0,20261,
#Partially deleted in new
chr1	38781166	38804085	chr1:38781166-38804085	1	-	38781166	38781166	8553170	3	133,196,185,	0,3373,22734,
#Partially deleted in new
chr1	38838197	38859823	chr1:38838197-38859823	3	-	38839552	38859646	0	7	1507,149,143,115,200,204,414,	0,7741,13417,14176,17510,18681,21212,
#Partially deleted in new
chr1	38839332	38874494	chr1:38839332-38874494	3	-	38839332	38839332	8553170	12	372,149,143,115,200,204,78,130,49,73,315,343,	0,6606,12282,13041,16375,17546,25304,27547,28229,33685,34262,34819,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	38839348	38848074	chr1:38839348-38848074	0	-	38839348	38839348	8553170	2	356,2136,	0,6590,
#Partially deleted in new
chr1	38845938	38856842	chr1:38845938-38856842	0	-	38845938	38845938	8553170	5	149,143,115,200,138,	0,5676,6435,9769,10766,
#Deleted in new
chr1	38851511	38852695	chr1:38851511-38852695	0	-	38851511	38851511	8553170	2	246,322,	0,862,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	38859999	38919396	chr1:38859999-38919396	3	+	38859999	38859999	8553170	4	240,78,89,223,	0,15941,53540,59174,
#Partially deleted in new
chr1	38860082	38876224	chr1:38860082-38876224	1	+	38860082	38860082	8553170	2	157,284,	0,15858,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	38862963	38874105	chr1:38862963-38874105	3	-	38864669	38873305	0	5	1751,130,49,73,815,	0,3916,4598,10054,10327,
#Partially deleted in new
chr1	38864235	38873368	chr1:38864235-38873368	1	-	38866916	38873305	789624	4	479,120,73,78,	0,2644,8782,9055,
#Partially deleted in new
chr1	38864335	38873278	chr1:38864335-38873278	0	-	38864335	38864335	8553170	4	379,130,49,261,	0,2544,3226,8682,
#Partially deleted in new
chr1	38864500	38881597	chr1:38864500-38881597	0	-	38864500	38864500	789624	6	214,130,49,73,2599,166,	0,2379,3061,8517,9094,16931,
#Partially deleted in new
chr1	38864502	38881617	chr1:38864502-38881617	0	-	38873685	38876098	789624	7	212,130,49,73,315,1416,186,	0,2377,3059,8515,9092,10275,16929,
#Partially deleted in new
chr1	38864528	38881602	chr1:38864528-38881602	0	-	38864528	38864528	8553170	3	186,120,171,	0,2351,16903,
#Partially deleted in new
chr1	38864528	38881602	chr1:38864528-38881602	3	-	38864669	38881467	789624	5	186,130,49,73,171,	0,2351,3033,8489,16903,
#Partially deleted in new
chr1	38864585	38872605	chr1:38864585-38872605	0	-	38864585	38864585	8553170	4	129,130,49,33,	0,2294,2976,7987,
#Deleted in new
chr1	38873441	38876226	chr1:38873441-38876226	0	+	38873441	38873441	789624	2	138,286,	0,2499,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	38874450	38876351	chr1:38874450-38876351	1	-	38874550	38876098	789624	1	1901,	0,
#Partially deleted in new
chr1	38874550	38881587	chr1:38874550-38881587	3	-	38874550	38876098	789624	2	1643,156,	0,6881,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	38885806	38941784	chr1:38885806-38941784	3	-	38886503	38919212	789624	8	877,62,61,101,113,149,371,103,	0,2156,7357,10162,25515,29755,33160,55875,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	38886295	38926837	chr1:38886295-38926837	1	-	38886503	38919212	789624	8	388,62,61,101,113,149,371,884,	0,1667,6868,9673,25026,29266,32671,39658,
#Partially deleted in new
chr1	38915502	38941799	chr1:38915502-38941799	1	-	38915557	38919212	789624	3	208,371,118,	0,3464,26179,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	38926869	38926977	chr1:38926869-38926977	3	+	38926869	38926869	8553170	1	108,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	38950824	38950925	chr1:38950824-38950925	3	-	38950824	38950824	8553170	1	101,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	38958274	38958925	chr1:38958274-38958925	7	-	38958274	38958274	16724991	2	172,178,	0,473,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	38991222	39006059	chr1:38991222-39006059	3	+	38991380	39004055	789624	5	378,141,135,72,2015,	0,6948,9749,12124,12822,
#Partially deleted in new
chr1	38991287	39004854	chr1:38991287-39004854	1	+	38991380	39004055	789624	4	313,135,72,810,	0,9684,12059,12757,
#Partially deleted in new
chr1	38991287	39004761	chr1:38991287-39004761	1	+	38991380	39004055	789624	4	313,141,72,717,	0,6883,12059,12757,
#Partially deleted in new
chr1	38991495	39004381	chr1:38991495-39004381	0	+	38991495	39004055	789624	4	105,141,135,337,	0,6675,9476,12549,
#Partially deleted in new
chr1	39026317	39034636	chr1:39026317-39034636	1	+	39028724	39034496	0	3	81,218,245,	0,2405,8074,
#Partially deleted in new
chr1	39026317	39034636	chr1:39026317-39034636	3	+	39028724	39034496	0	3	85,218,245,	0,2405,8074,
#Partially deleted in new
chr1	39081315	39102981	chr1:39081315-39102981	1	+	39084218	39102848	789624	4	228,55,272,279,	0,2047,2851,21387,
#Partially deleted in new
chr1	39081416	39103726	chr1:39081416-39103726	1	+	39084218	39102848	789624	3	127,272,1024,	0,2750,21286,
#Partially deleted in new
chr1	39084061	39487177	chr1:39084061-39487177	3	+	39084218	39485794	789624	101	377,62,90,96,78,93,167,113,107,120,96,128,94,155,277,129,78,162,105,96,126,153,155,127,184,170,179,139,194,163,84,108,99,153,89,136,5451,150,216,150,234,150,234,225,519,177,124,209,318,167,157,118,63,242,130,200,496,1472,162,171,167,160,327,85,242,207,120,108,219,204,232,227,123,102,102,174,156,198,129,174,156,207,120,170,160,195,129,144,189,121,164,163,155,75,18,118,69,212,111,130,1640,	0,147120,165952,167784,170236,173874,198146,199127,199347,200004,200271,201021,201235,201542,203224,207848,208704,209396,210984,211725,213558,216148,218862,225508,226183,226769,231451,232329,233152,234391,235602,238546,238848,240131,240584,243156,247141,253120,256440,256742,262915,265416,266723,268945,273313,274635,275079,276731,277298,284086,285968,288417,294399,295141,296182,297891,301372,303125,338312,338668,339966,343393,343899,345180,345765,346640,348473,348986,350352,351496,353715,355212,356941,357162,357890,358085,358350,358652,359384,360600,363370,363630,363971,364532,366990,368094,368622,369645,370847,374308,375024,376570,377821,379550,381033,384553,385485,395736,396858,400539,401476,
#Partially deleted in new
chr1	39084131	39486980	chr1:39084131-39486980	1	+	39084218	39485794	0	97	307,62,90,78,93,167,113,107,120,96,128,94,155,277,129,78,162,105,96,126,153,155,127,184,170,179,139,194,163,84,108,99,153,89,136,5451,150,216,150,234,150,234,225,519,177,124,209,318,167,157,118,63,242,130,200,496,1472,162,171,167,160,85,242,207,120,108,219,204,9,232,227,123,102,102,174,156,198,129,174,156,207,120,170,160,195,129,144,189,121,164,163,155,75,118,212,130,1443,	0,147050,165882,170166,173804,198076,199057,199277,199934,200201,200951,201165,201472,203154,207778,208634,209326,210914,211655,213488,216078,218792,225438,226113,226699,231381,232259,233082,234321,235532,238476,238778,240061,240514,243086,247071,253050,256370,256672,262845,265346,266653,268875,273243,274565,275009,276661,277228,284016,285898,288347,294329,295071,296112,297821,301302,303055,338242,338598,339896,343323,345110,345695,346570,348403,348916,350282,351426,352350,353645,355142,356871,357092,357820,358015,358280,358582,359314,360530,363300,363560,363901,364462,366920,368024,368552,369575,370777,374238,374954,376500,377751,379480,384483,395666,400469,401406,
#Partially deleted in new
chr1	39084166	39486987	chr1:39084166-39486987	1	+	39084218	39485794	0	93	272,62,90,78,93,167,113,107,120,96,128,94,155,277,129,78,162,105,96,126,153,155,127,184,170,179,139,194,163,84,108,99,153,89,136,150,234,225,519,177,124,209,318,167,157,118,63,242,130,200,496,1472,162,171,167,160,327,85,242,207,120,108,219,204,9,232,227,123,102,102,174,156,198,129,174,156,207,120,170,160,195,129,144,189,121,164,163,155,75,118,212,130,1450,	0,147015,165847,170131,173769,198041,199022,199242,199899,200166,200916,201130,201437,203119,207743,208599,209291,210879,211620,213453,216043,218757,225403,226078,226664,231346,232224,233047,234286,235497,238441,238743,240026,240479,243051,265311,266618,268840,273208,274530,274974,276626,277193,283981,285863,288312,294294,295036,296077,297786,301267,303020,338207,338563,339861,343288,343794,345075,345660,346535,348368,348881,350247,351391,352315,353610,355107,356836,357057,357785,357980,358245,358547,359279,360495,363265,363525,363866,364427,366885,367989,368517,369540,370742,374203,374919,376465,377716,379445,384448,395631,400434,401371,
#Partially deleted in new
chr1	39105410	39323008	chr1:39105410-39323008	0	+	39105623	39323008	789624	32	307,62,90,78,93,167,113,107,120,96,128,94,155,277,129,78,162,105,96,126,153,155,127,184,170,179,139,194,163,84,108,99,	0,125771,144603,148887,152525,176797,177778,177998,178655,178922,179672,179886,180193,181875,186499,187355,188047,189635,190376,192209,194799,197513,204159,204834,205420,210102,210980,211803,213042,214253,217197,217499,
#Partially deleted in new
chr1	39105428	39254648	chr1:39105428-39254648	0	+	39105428	39105428	8553170	4	289,62,90,351,	0,125753,144585,148869,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	39120939	39121043	chr1:39120939-39121043	3	-	39120939	39120939	8553170	1	104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	39154163	39154296	chr1:39154163-39154296	7	-	39154163	39154163	16724991	1	133,	0,
#Partially deleted in new
chr1	39204245	39487177	chr1:39204245-39487177	1	+	39205022	39485794	789624	101	886,62,90,96,78,93,167,113,107,120,96,128,94,155,277,129,78,162,105,96,126,153,155,127,184,170,179,139,194,163,84,108,99,153,89,136,5451,150,216,150,234,150,234,225,519,177,124,209,318,167,157,118,63,242,130,200,496,1472,162,171,167,160,327,85,242,207,120,108,219,204,232,227,123,102,102,174,156,198,129,174,156,207,120,170,160,195,129,144,189,121,164,163,155,75,18,118,69,212,111,130,1640,	0,26936,45768,47600,50052,53690,77962,78943,79163,79820,80087,80837,81051,81358,83040,87664,88520,89212,90800,91541,93374,95964,98678,105324,105999,106585,111267,112145,112968,114207,115418,118362,118664,119947,120400,122972,126957,132936,136256,136558,142731,145232,146539,148761,153129,154451,154895,156547,157114,163902,165784,168233,174215,174957,175998,177707,181188,182941,218128,218484,219782,223209,223715,224996,225581,226456,228289,228802,230168,231312,233531,235028,236757,236978,237706,237901,238166,238468,239200,240416,243186,243446,243787,244348,246806,247910,248438,249461,250663,254124,254840,256386,257637,259366,260849,264369,265301,275552,276674,280355,281292,
#Partially deleted in new
chr1	39204694	39254375	chr1:39204694-39254375	0	+	39205022	39254375	789624	4	437,62,90,78,	0,26487,45319,49603,
#Deleted in new
chr1	39206511	39206957	chr1:39206511-39206957	3	+	39206511	39206511	8553170	1	446,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	39215261	39260540	chr1:39215261-39260540	0	+	39215261	39215261	8553170	6	168,62,90,78,93,151,	0,15920,34752,39036,42674,45128,
#Partially deleted in new
chr1	39215264	39254440	chr1:39215264-39254440	0	+	39215264	39215264	8553170	4	165,62,90,143,	0,15917,34749,39033,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	39249837	39257649	chr1:39249837-39257649	3	-	39249837	39249837	8553170	3	365,78,115,	0,4304,7697,
#Partially deleted in new
chr1	39268464	39327225	chr1:39268464-39327225	0	+	39268697	39309623	789624	31	1256,167,113,107,120,96,128,94,155,277,129,78,162,105,96,126,6,153,127,184,170,179,139,194,163,84,108,99,153,89,8,	0,13743,14724,14944,15601,15868,16618,16832,17139,18821,23445,24301,24993,26581,27322,29155,30787,31745,41105,41780,42366,47048,47926,48749,49988,51199,54143,54445,55728,56181,58753,
#Partially deleted in new
chr1	39268526	39357775	chr1:39268526-39357775	0	+	39268697	39357775	789624	35	1161,167,113,107,120,96,128,94,155,277,129,78,162,105,96,126,153,155,127,184,170,179,139,194,163,84,108,99,153,89,136,150,234,225,401,	0,13681,14662,14882,15539,15806,16556,16770,17077,18759,23383,24239,24931,26519,27260,29093,31683,34397,41043,41718,42304,46986,47864,48687,49926,51137,54081,54383,55666,56119,58691,80951,82258,84480,88848,
#Deleted in new
chr1	39283125	39284220	chr1:39283125-39284220	0	+	39283125	39283125	8553170	3	176,107,155,	0,283,940,
#Deleted in new
chr1	39284090	39285330	chr1:39284090-39285330	0	+	39284090	39284090	8553170	3	338,128,34,	0,992,1206,
#Partially deleted in new
chr1	39285336	39287613	chr1:39285336-39287613	0	+	39285336	39285336	8553170	2	422,328,	0,1949,
#Partially deleted in new
chr1	39300313	39486987	chr1:39300313-39486987	0	+	39300313	39485794	789624	71	49,155,127,184,170,179,139,194,163,84,108,99,153,89,136,150,234,225,519,177,124,209,318,167,157,118,242,130,200,496,1472,162,171,167,160,85,242,207,120,108,219,204,9,232,227,123,102,102,174,156,198,129,174,156,207,120,170,160,195,129,144,189,121,164,163,155,75,118,212,130,1450,	0,2610,9256,9931,10517,15199,16077,16900,18139,19350,22294,22596,23879,24332,26904,49164,50471,52693,57061,58383,58827,60479,61046,67834,69716,72165,78889,79930,81639,85120,86873,122060,122416,123714,127141,128928,129513,130388,132221,132734,134100,135244,136168,137463,138960,140689,140910,141638,141833,142098,142400,143132,144348,147118,147378,147719,148280,150738,151842,152370,153393,154595,158056,158772,160318,161569,163298,168301,179484,184287,185224,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr1	39300313	39373473	chr1:39300313-39373473	0	+	39300313	39300313	8553170	26	49,155,127,184,170,179,139,194,163,84,108,99,153,89,136,150,234,225,519,177,124,209,318,167,157,995,	0,2610,9256,9931,10517,15199,16077,16900,18139,19350,22294,22596,23879,24332,26904,49164,50471,52693,57061,58383,58827,60479,61046,67834,69716,72165,
#Partially deleted in new
chr1	39304293	39304898	chr1:39304293-39304898	7	-	39304293	39304293	16724991	2	255,33,	0,572,
#Partially deleted in new
chr1	39328368	39331244	chr1:39328368-39331244	0	+	39328368	39328368	8553170	2	338,42,	0,2834,
#Partially deleted in new
chr1	39331137	39486987	chr1:39331137-39486987	1	+	39331268	39485794	0	64	5516,150,216,150,234,150,234,225,519,177,124,209,318,167,157,118,63,242,130,200,496,1472,162,171,167,160,327,85,242,207,120,108,219,204,9,232,227,123,102,102,174,156,198,129,174,156,207,120,170,160,195,129,144,189,121,164,163,155,75,18,118,212,130,1450,	0,6044,9364,9666,15839,18340,19647,21869,26237,27559,28003,29655,30222,37010,38892,41341,47323,48065,49106,50815,54296,56049,91236,91592,92890,96317,96823,98104,98689,99564,101397,101910,103276,104420,105344,106639,108136,109865,110086,110814,111009,111274,111576,112308,113524,116294,116554,116895,117456,119914,121018,121546,122569,123771,127232,127948,129494,130745,132474,133957,137477,148660,153463,154400,
#Partially deleted in new
chr1	39409502	39428092	chr1:39409502-39428092	0	+	39410265	39428092	789624	6	4975,162,171,167,160,132,	0,12871,13227,14525,17952,18458,
#Deleted in new
chr1	39410265	39414549	chr1:39410265-39414549	1	+	39410265	39414549	789624	1	4284,	0,
#Deleted in new
chr1	39434484	39436007	chr1:39434484-39436007	0	+	39434484	39434484	8553170	2	148,450,	0,1073,
#Partially deleted in new
chr1	39435625	39442289	chr1:39435625-39442289	0	+	39435625	39435625	8553170	7	136,9,227,123,102,102,143,	0,856,3648,5377,5598,6326,6521,
#Deleted in new
chr1	39452532	39453749	chr1:39452532-39453749	0	+	39452532	39452532	8553170	2	280,43,	0,1174,
#Partially deleted in new
chr1	39453836	39486987	chr1:39453836-39486987	0	+	39453836	39485794	789624	13	14,189,121,164,15,163,155,75,18,118,212,130,1450,	0,1072,4533,5249,5981,6795,8046,9775,11258,14778,25961,30764,31701,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	39456705	39464909	chr1:39456705-39464909	0	+	39456705	39456705	8553170	4	2544,163,155,1298,	0,3926,5177,6906,
#Partially deleted in new
chr1	39459122	39486987	chr1:39459122-39486987	0	+	39459122	39485794	789624	10	127,163,155,75,18,118,212,111,130,1450,	0,1509,2760,4489,5972,9492,20675,21797,25478,26415,
#Partially deleted in new
chr1	39460746	39486987	chr1:39460746-39486987	0	+	39460746	39485794	789624	8	48,155,75,118,212,111,130,1450,	0,1136,2865,7868,19051,20173,23854,24791,
#Partially deleted in new
chr1	39462019	39479994	chr1:39462019-39479994	0	+	39462019	39479994	789624	5	18,75,118,69,197,	0,1592,6595,7527,17778,
#Partially deleted in new
chr1	39462023	39480116	chr1:39462023-39480116	0	+	39462023	39462023	8553170	4	14,75,118,319,	0,1588,6591,17774,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	39467749	39479880	chr1:39467749-39479880	0	+	39467749	39467749	8553170	3	426,118,83,	0,865,12048,
#Partially deleted in new
chr1	39468592	39486217	chr1:39468592-39486217	0	+	39468592	39468592	8553170	4	140,212,111,1617,	0,11205,12327,16008,
#Partially deleted in new
chr1	39468642	39486987	chr1:39468642-39486987	0	+	39468642	39468642	8553170	3	90,212,2387,	0,11155,15958,
#Partially deleted in new
chr1	39491645	39525935	chr1:39491645-39525935	3	+	39491991	39525798	789624	7	680,190,149,195,80,111,287,	0,19528,20110,29730,30757,31361,34003,
#Deleted in new
chr1	39514955	39516490	chr1:39514955-39516490	7	+	39514955	39514955	16724991	1	1535,	0,
#Partially deleted in new
chr1	39522279	39559671	chr1:39522279-39559671	7	-	39522279	39522279	16724991	12	226,136,90,316,110,122,125,1373,27,44,150,38,	0,1282,1527,2556,6775,19440,23453,25299,30838,32069,36936,37354,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	39522279	39537282	chr1:39522279-39537282	5	-	39522279	39522279	16724991	5	226,136,90,149,92,	0,1282,1527,6736,14911,
#Partially deleted in new
chr1	39522279	39546187	chr1:39522279-39546187	5	-	39522279	39522279	16724991	2	226,455,	0,23453,
#Partially deleted in new
chr1	39522279	39541841	chr1:39522279-39541841	5	-	39522279	39522279	16724991	3	226,149,122,	0,6736,19440,
#Deleted in new
chr1	39522279	39525685	chr1:39522279-39525685	5	-	39522279	39522279	16724991	3	226,136,1879,	0,1282,1527,
#Partially deleted in new
chr1	39522279	39545761	chr1:39522279-39545761	5	-	39522279	39522279	16724991	4	226,110,122,29,	0,6775,19440,23453,
#Partially deleted in new
chr1	39522286	39556662	chr1:39522286-39556662	4	-	39522286	39522286	16724991	11	219,136,110,122,125,56,77,90,27,44,64,	0,1275,6768,19433,23446,25292,26383,26575,30831,32062,34312,
#Partially deleted in new
chr1	39522286	39556660	chr1:39522286-39556660	4	-	39522286	39522286	16724991	11	219,222,110,122,125,56,90,27,44,68,62,	0,2549,6768,19433,23446,25292,26575,30831,32062,33847,34312,
#Partially deleted in new
chr1	39522299	39556721	chr1:39522299-39556721	4	-	39522299	39522299	16724991	10	206,136,90,110,122,125,1373,27,44,123,	0,1262,1507,6755,19420,23433,25279,30818,32049,34299,
#Partially deleted in new
chr1	39522313	39556740	chr1:39522313-39556740	4	-	39522313	39522313	16724991	12	192,140,90,222,150,110,122,125,1373,27,44,142,	0,1244,1493,2522,3385,6741,19406,23419,25265,30804,32035,34285,
#Partially deleted in new
chr1	39522325	39559366	chr1:39522325-39559366	4	-	39522325	39522325	16724991	10	180,136,110,122,125,1373,27,44,140,151,	0,1236,6729,19394,23407,25253,30792,32023,34273,36890,
#Partially deleted in new
chr1	39522350	39559356	chr1:39522350-39559356	4	-	39522350	39522350	16724991	10	155,110,122,125,56,90,27,44,140,141,	0,6704,19369,23382,25228,26511,30767,31998,34248,36865,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	39522471	39556723	chr1:39522471-39556723	4	-	39522471	39522471	16724991	11	34,136,90,110,153,122,125,1373,27,44,125,	0,1090,1335,6583,14719,19248,23261,25107,30646,31877,34127,
#Partially deleted in new
chr1	39523844	39556719	chr1:39523844-39556719	4	-	39523844	39523844	16724991	12	52,222,110,122,125,30,41,64,90,27,44,121,	0,991,5210,17875,21888,23734,23864,24838,25017,29273,30504,32754,
#Partially deleted in new
chr1	39531837	39558707	chr1:39531837-39558707	5	-	39531837	39531837	16724991	7	59,185,125,90,107,44,70,	0,9819,13895,17024,17952,22511,26800,
#Partially deleted in new
chr1	39560815	39576751	chr1:39560815-39576751	1	-	39561697	39575951	789624	15	307,103,131,94,128,120,88,273,96,138,95,140,116,194,993,	0,869,1257,1507,2798,3607,3870,4290,6935,7986,8779,9047,10418,11577,14943,
#Partially deleted in new
chr1	39560815	39576744	chr1:39560815-39576744	3	-	39561697	39575951	789624	16	307,103,131,94,128,87,72,88,273,96,138,95,140,116,194,986,	0,869,1257,1507,2798,3020,3655,3870,4290,6935,7986,8779,9047,10418,11577,14943,
#Partially deleted in new
chr1	39560815	39576401	chr1:39560815-39576401	1	-	39561697	39575951	789624	16	307,103,131,94,128,87,120,88,273,96,138,95,140,116,194,643,	0,869,1257,1507,2798,3020,3607,3870,4290,6935,7986,8779,9047,10418,11577,14943,
#Partially deleted in new
chr1	39560815	39576253	chr1:39560815-39576253	1	-	39561697	39575951	789624	15	307,103,131,94,128,72,88,273,96,138,95,140,116,194,495,	0,869,1257,1507,2798,3655,3870,4290,6935,7986,8779,9047,10418,11577,14943,
#Deleted in new
chr1	39560815	39564491	chr1:39560815-39564491	0	-	39561104	39564491	789624	7	307,60,131,94,128,87,69,	0,912,1257,1507,2798,3020,3607,
#Deleted in new
chr1	39560815	39564526	chr1:39560815-39564526	0	-	39560815	39560815	8553170	2	1388,2204,	0,1507,
#Deleted in new
chr1	39560815	39562010	chr1:39560815-39562010	0	-	39560815	39560815	8553170	2	307,326,	0,869,
#Deleted in new
chr1	39560815	39564038	chr1:39560815-39564038	0	-	39560815	39560815	8553170	4	307,103,131,1716,	0,869,1257,1507,
#Deleted in new
chr1	39561551	39562188	chr1:39561551-39562188	0	-	39561697	39562188	789624	2	236,116,	0,521,
#Partially deleted in new
chr1	39561686	39572484	chr1:39561686-39572484	0	-	39561697	39572484	789624	14	101,131,58,128,87,120,88,273,96,138,95,140,116,92,	0,386,636,1927,2149,2736,2999,3419,6064,7115,7908,8176,9547,10706,
#Deleted in new
chr1	39562383	39564124	chr1:39562383-39564124	0	-	39562383	39562383	8553170	3	33,128,289,	0,1230,1452,
#Deleted in new
chr1	39563445	39565233	chr1:39563445-39565233	0	-	39563445	39563445	8553170	4	477,72,88,128,	0,1025,1240,1660,
#Partially deleted in new
chr1	39563613	39568857	chr1:39563613-39568857	0	-	39563613	39568857	789624	6	128,120,73,273,96,56,	0,809,1087,1492,4137,5188,
#Deleted in new
chr1	39563615	39564528	chr1:39563615-39564528	0	-	39563615	39563615	8553170	2	307,106,	0,807,
#Deleted in new
chr1	39563795	39564536	chr1:39563795-39564536	0	-	39563795	39563795	8553170	2	127,66,	0,675,
#Deleted in new
chr1	39564232	39565183	chr1:39564232-39565183	0	-	39564232	39564232	8553170	3	310,88,78,	0,453,873,
#Partially deleted in new
chr1	39564384	39568856	chr1:39564384-39568856	0	-	39564384	39564384	8553170	4	158,273,96,55,	0,721,3366,4417,
#Partially deleted in new
chr1	39565066	39572552	chr1:39565066-39572552	1	+	39565066	39565066	8553170	4	153,92,144,98,	0,1516,5413,7388,
#Partially deleted in new
chr1	39565105	39575781	chr1:39565105-39575781	0	-	39571229	39575781	789624	8	273,96,138,95,140,253,194,23,	0,2645,3696,4489,4757,5991,7287,10653,
#Partially deleted in new
chr1	39565159	39573203	chr1:39565159-39573203	3	+	39565159	39565159	789624	4	60,144,224,123,	0,5320,7295,7921,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	39565298	39568408	chr1:39565298-39568408	0	-	39565298	39565298	8553170	2	80,658,	0,2452,
#Deleted in new
chr1	39567373	39567508	chr1:39567373-39567508	3	-	39567373	39567373	789624	1	135,	0,
#Deleted in new
chr1	39568697	39571175	chr1:39568697-39571175	0	-	39568697	39568697	8553170	4	242,95,140,79,	0,897,1165,2399,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	39568824	39572418	chr1:39568824-39572418	0	-	39568824	39572418	789624	6	115,95,140,116,99,26,	0,770,1038,2409,2782,3568,
#Deleted in new
chr1	39568861	39571195	chr1:39568861-39571195	0	-	39568861	39568861	8553170	3	78,140,99,	0,1001,2235,
#Deleted in new
chr1	39569494	39569990	chr1:39569494-39569990	0	-	39569494	39569494	8553170	2	195,128,	0,368,
#Partially deleted in new
chr1	39572392	39576790	chr1:39572392-39576790	0	-	39572392	39575951	789624	3	194,465,239,	0,3366,4159,
#Deleted in new
chr1	39575937	39576787	chr1:39575937-39576787	0	-	39575937	39575951	8553170	2	296,236,	0,614,
#Partially deleted in new
chr1	39624152	39639945	chr1:39624152-39639945	3	-	39626506	39639625	789624	5	3028,82,84,67,400,	0,6074,7343,8496,15393,
#Deleted in new
chr1	39633415	39633903	chr1:39633415-39633903	3	+	39633415	39633415	8553170	2	89,215,	0,273,
#Partially deleted in new
chr1	39659120	39672038	chr1:39659120-39672038	3	-	39659120	39672038	789624	6	366,185,123,130,168,135,	0,1958,4191,6400,6948,12783,
#Partially deleted in new
chr1	39678647	39691689	chr1:39678647-39691689	3	-	39682535	39684603	789624	4	4086,216,170,384,	0,5289,5794,12658,
#Partially deleted in new
chr1	39678647	39691485	chr1:39678647-39691485	1	-	39682535	39684603	789624	3	4086,170,180,	0,5794,12658,
#Partially deleted in new
chr1	39678647	39691485	chr1:39678647-39691485	1	-	39682535	39684603	789624	5	4086,216,170,106,180,	0,5289,5794,12417,12658,
#Partially deleted in new
chr1	39692181	39745403	chr1:39692181-39745403	0	+	39741918	39745403	789624	8	407,158,99,44,27,82,101,29,	0,43286,47983,49184,49713,51034,51642,53193,
#Deleted in new
chr1	39718027	39718595	chr1:39718027-39718595	7	+	39718027	39718027	16724991	1	568,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	39723565	39723627	chr1:39723565-39723627	3	-	39723565	39723565	8553170	1	62,	0,
#Deleted in new
chr1	39738878	39742481	chr1:39738878-39742481	0	+	39738878	39738878	8553170	4	53,99,44,587,	0,1286,2487,3016,
#Partially deleted in new
chr1	39738881	39753707	chr1:39738881-39753707	3	+	39738900	39753355	0	10	50,99,44,27,82,101,124,186,143,421,	0,1283,2484,3013,4334,4942,6493,10021,14028,14405,
#Partially deleted in new
chr1	39738884	39763914	chr1:39738884-39763914	1	+	39738900	39763742	0	10	47,99,44,27,82,101,124,186,143,226,	0,1280,2481,3010,4331,4939,6490,10018,14025,24804,
#Deleted in new
chr1	39738885	39741843	chr1:39738885-39741843	0	+	39738885	39738885	8553170	3	38,99,478,	0,1279,2480,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	39738887	39753716	chr1:39738887-39753716	0	+	39738900	39740258	789624	10	36,99,44,137,82,101,3393,186,143,430,	0,1277,2478,3007,4328,4936,6487,10015,14022,14399,
#Partially deleted in new
chr1	39738889	39753716	chr1:39738889-39753716	0	+	39738889	39738889	8553170	9	34,99,44,1403,101,124,186,143,430,	0,1275,2476,3005,4934,6485,10013,14020,14397,
#Partially deleted in new
chr1	39738900	39763914	chr1:39738900-39763914	1	+	39738900	39762624	0	11	31,99,44,27,82,101,124,186,143,135,226,	0,1264,2465,2994,4315,4923,6474,10002,14009,23616,24788,
#Partially deleted in new
chr1	39738900	39753444	chr1:39738900-39753444	0	+	39738900	39753355	789624	7	31,99,101,124,186,143,158,	0,1264,4923,6474,10002,14009,14386,
#Partially deleted in new
chr1	39738900	39753266	chr1:39738900-39753266	1	+	39738900	39752966	789624	8	31,99,44,27,82,101,186,357,	0,1264,2465,2994,4315,4923,10002,14009,
#Partially deleted in new
chr1	39738900	39753052	chr1:39738900-39753052	0	+	39741918	39753052	789624	9	31,175,44,27,82,101,124,186,143,	0,1188,2465,2994,4315,4923,6474,10002,14009,
#Partially deleted in new
chr1	39738903	39749088	chr1:39738903-39749088	0	+	39738903	39740258	789624	8	20,99,44,137,82,101,124,186,	0,1261,2462,2991,4312,4920,6471,9999,
#Partially deleted in new
chr1	39738907	39753716	chr1:39738907-39753716	0	+	39738907	39740258	789624	10	16,99,44,27,82,101,85,186,143,430,	0,1257,2458,2987,4308,4916,6506,9995,14002,14379,
#Deleted in new
chr1	39738989	39745498	chr1:39738989-39745498	0	+	39738989	39738989	8553170	7	304,99,44,137,82,101,124,	0,1175,2376,2905,4226,4834,6385,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	39757181	39788861	chr1:39757181-39788861	3	-	39760418	39788485	789624	7	3387,111,80,195,149,190,710,	0,5910,6530,7441,17126,17667,30970,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	39761198	39763914	chr1:39761198-39763914	0	+	39761198	39761198	8553170	4	175,90,135,226,	0,1119,1318,2490,
#Deleted in new
chr1	39769522	39771348	chr1:39769522-39771348	3	-	39769701	39771255	789624	1	1826,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	39779968	39781418	chr1:39779968-39781418	3	+	39779968	39779968	8553170	2	1037,181,	0,1269,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	39788975	39790171	chr1:39788975-39790171	3	+	39788975	39788975	789624	1	1196,	0,
#Deleted in new
chr1	39795842	39795996	chr1:39795842-39795996	7	-	39795842	39795842	16724991	1	154,	0,
#Partially deleted in new
chr1	39799421	39805452	chr1:39799421-39805452	3	+	39799421	39799421	8553170	3	160,66,575,	0,904,5456,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	39801413	39817460	chr1:39801413-39817460	3	-	39801413	39801413	8553170	4	71,318,72,212,	0,7640,11521,15835,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	39804520	39809450	chr1:39804520-39809450	1	+	39804520	39804520	8553170	3	512,197,389,	0,3481,4541,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	39838109	39883425	chr1:39838109-39883425	0	-	39865556	39883425	8553170	12	3804,118,110,78,113,112,143,146,99,141,958,108,	0,5991,6421,9110,9438,9876,12009,14621,15860,19167,26600,45208,
#Partially deleted in new
chr1	39841021	39883504	chr1:39841021-39883504	1	-	39841743	39848001	789624	10	892,118,110,78,112,143,146,99,141,187,	0,3079,3509,6198,6964,9097,11709,12948,16255,42296,
#Partially deleted in new
chr1	39841050	39883506	chr1:39841050-39883506	3	-	39841743	39883491	789624	11	863,118,110,78,113,112,143,146,99,141,189,	0,3050,3480,6169,6497,6935,9068,11680,12919,16226,42267,
#Partially deleted in new
chr1	39841050	39883506	chr1:39841050-39883506	1	-	39841743	39883491	789624	10	863,118,110,113,112,143,146,99,141,189,	0,3050,3480,6497,6935,9068,11680,12919,16226,42267,
#Partially deleted in new
chr1	39841050	39883491	chr1:39841050-39883491	1	-	39841743	39883491	789624	9	863,118,110,78,113,106,143,146,174,	0,3050,3480,6169,6497,6935,9068,11680,42267,
#Partially deleted in new
chr1	39841050	39883504	chr1:39841050-39883504	0	-	39844174	39883491	789624	10	863,118,78,113,112,143,146,99,141,187,	0,3050,6169,6497,6935,9068,11680,12919,16226,42267,
#Partially deleted in new
chr1	39841625	39883511	chr1:39841625-39883511	0	-	39850243	39883491	789624	8	288,118,110,78,113,112,143,194,	0,2475,2905,5594,5922,6360,8493,41692,
#Partially deleted in new
chr1	39841644	39883480	chr1:39841644-39883480	0	-	39841644	39841644	8553170	5	269,118,110,78,163,	0,2456,2886,5575,41673,
#Partially deleted in new
chr1	39841713	39883434	chr1:39841713-39883434	1	-	39841743	39844188	789624	4	200,118,110,117,	0,2387,2817,41604,
#Partially deleted in new
chr1	39841832	39848097	chr1:39841832-39848097	0	-	39841832	39841832	8553170	5	81,118,110,78,112,	0,2268,2698,5387,6153,
#Partially deleted in new
chr1	39844195	39883481	chr1:39844195-39883481	0	-	39850243	39883481	789624	9	23,110,78,113,112,143,99,141,164,	0,335,3024,3352,3790,5923,9774,13081,39122,
#Deleted in new
chr1	39847043	39847757	chr1:39847043-39847757	0	-	39847043	39847043	8553170	2	254,210,	0,504,
#Partially deleted in new
chr1	39847219	39883496	chr1:39847219-39883496	0	-	39850243	39883491	789624	7	78,113,112,139,99,141,179,	0,328,766,2903,6750,10057,36098,
#Partially deleted in new
chr1	39847280	39883475	chr1:39847280-39883475	0	-	39857401	39883475	789624	8	17,113,112,139,99,141,71,158,	0,267,705,2842,6689,9996,28781,36037,
#Partially deleted in new
chr1	39847593	39857399	chr1:39847593-39857399	0	-	39848091	39857399	789624	6	154,112,139,146,99,123,	0,392,2529,5137,6376,9683,
#Partially deleted in new
chr1	39852557	39857408	chr1:39852557-39857408	0	-	39852557	39852557	8553170	3	319,99,132,	0,1412,4719,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	39881565	39881678	chr1:39881565-39881678	3	-	39881565	39881565	8553170	1	113,	0,
#Deleted in new
chr1	39895425	39902013	chr1:39895425-39902013	1	-	39897371	39901888	789624	3	2545,505,206,	0,5513,6382,
#Deleted in new
chr1	39897226	39901882	chr1:39897226-39901882	3	-	39897371	39901434	789624	2	744,944,	0,3712,
#Deleted in new
chr1	39897744	39899098	chr1:39897744-39899098	3	+	39897744	39897744	8553170	2	322,463,	0,891,
#Deleted in new
chr1	39899611	39901919	chr1:39899611-39901919	1	-	39900813	39901888	789624	2	1832,112,	0,2196,
#Deleted in new
chr1	39901133	39902256	chr1:39901133-39902256	0	-	39901133	39901434	789624	2	310,116,	0,1007,
#Partially deleted in new
chr1	39955111	39969968	chr1:39955111-39969968	1	+	39965325	39969568	789624	12	274,124,79,158,91,122,84,84,113,144,177,464,	0,10099,10359,10745,11489,11699,11974,12516,12692,13222,13457,14393,
#Partially deleted in new
chr1	39955129	39969966	chr1:39955129-39969966	3	+	39955292	39969568	789624	14	256,135,125,124,79,158,91,122,84,84,113,144,177,462,	0,1957,3571,10081,10341,10727,11471,11681,11956,12498,12674,13204,13439,14375,
#Partially deleted in new
chr1	39955145	39966691	chr1:39955145-39966691	0	+	39955292	39966691	789624	7	234,135,125,124,79,158,91,	0,1941,3555,10065,10325,10711,11455,
#Partially deleted in new
chr1	39955149	39969966	chr1:39955149-39969966	1	+	39955292	39969568	789624	14	236,135,164,124,79,158,91,122,84,84,113,144,177,462,	0,1937,3512,10061,10321,10707,11451,11661,11936,12478,12654,13184,13419,14355,
#Partially deleted in new
chr1	39955157	39969966	chr1:39955157-39969966	0	+	39955157	39955157	789624	12	228,135,125,124,79,158,91,122,84,144,177,462,	0,1929,3543,10053,10313,10699,11443,11653,11928,13176,13411,14347,
#Partially deleted in new
chr1	39957820	39967169	chr1:39957820-39967169	0	+	39957820	39957820	8553170	8	140,125,124,79,158,91,122,84,	0,880,7390,7650,8036,8780,8990,9265,
#Deleted in new
chr1	39962679	39963404	chr1:39962679-39963404	7	+	39962679	39962679	16724991	1	725,	0,
#Partially deleted in new
chr1	39964210	39969966	chr1:39964210-39969966	0	+	39964210	39964210	8553170	9	1124,79,158,91,84,113,144,177,462,	0,1260,1646,2390,3417,3593,4123,4358,5294,
#Deleted in new
chr1	39966661	39968692	chr1:39966661-39968692	0	+	39966661	39966661	8553170	6	30,122,84,289,144,124,	0,149,424,966,1672,1907,
#Deleted in new
chr1	39967482	39968673	chr1:39967482-39968673	0	+	39967482	39967482	8553170	3	434,144,105,	0,851,1086,
#Deleted in new
chr1	39967618	39968614	chr1:39967618-39968614	0	+	39967618	39967618	8553170	2	859,46,	0,950,
#Partially deleted in new
chr1	40040232	40072649	chr1:40040232-40072649	3	+	40059346	40071533	0	13	551,122,104,78,144,86,106,178,185,124,83,144,1200,	0,19104,19834,21502,23994,24241,25982,27307,29457,29926,30197,30603,31217,
#Partially deleted in new
chr1	40040239	40072515	chr1:40040239-40072515	1	+	40059346	40071533	0	13	544,125,101,78,144,86,106,178,185,124,83,144,1066,	0,19094,19830,21495,23987,24234,25975,27300,29450,29919,30190,30596,31210,
#Partially deleted in new
chr1	40040322	40064558	chr1:40040322-40064558	0	+	40059346	40064558	789624	6	145,125,104,78,144,85,	0,19011,19744,21412,23904,24151,
#Partially deleted in new
chr1	40040582	40066300	chr1:40040582-40066300	0	+	40059346	40066300	789624	7	201,125,104,78,144,86,86,	0,18751,19484,21152,23644,23891,25632,
#Partially deleted in new
chr1	40040719	40069764	chr1:40040719-40069764	0	+	40059346	40069764	789624	6	82,122,23,48,178,75,	0,18617,19347,25553,26820,28970,
#Partially deleted in new
chr1	40040731	40066314	chr1:40040731-40066314	0	+	40059346	40066314	789624	8	70,65,125,104,78,144,86,100,	0,697,18602,19335,21003,23495,23742,25483,
#Partially deleted in new
chr1	40040732	40066229	chr1:40040732-40066229	0	+	40059346	40066229	789624	8	51,65,125,104,78,144,86,15,	0,696,18601,19334,21002,23494,23741,25482,
#Partially deleted in new
chr1	40040748	40071535	chr1:40040748-40071535	1	+	40059346	40071533	0	13	53,125,104,78,144,86,106,178,185,124,83,144,86,	0,18585,19318,20986,23478,23725,25466,26791,28941,29410,29681,30087,30701,
#Partially deleted in new
chr1	40040751	40071608	chr1:40040751-40071608	1	+	40059346	40071533	0	13	50,125,101,78,144,86,106,178,185,124,83,144,159,	0,18582,19318,20983,23475,23722,25463,26788,28938,29407,29678,30084,30698,
#Partially deleted in new
chr1	40040752	40072641	chr1:40040752-40072641	1	+	40059346	40071533	0	13	49,122,101,78,144,86,106,178,185,124,83,144,1192,	0,18584,19317,20982,23474,23721,25462,26787,28937,29406,29677,30083,30697,
#Partially deleted in new
chr1	40040760	40072271	chr1:40040760-40072271	1	+	40059346	40071533	0	13	41,122,104,78,144,86,106,178,185,124,83,144,822,	0,18576,19306,20974,23466,23713,25454,26779,28929,29398,29669,30075,30689,
#Partially deleted in new
chr1	40040764	40067700	chr1:40040764-40067700	0	+	40059346	40067700	789624	8	19,122,101,78,144,86,106,161,	0,18572,19305,20970,23462,23709,25450,26775,
#Partially deleted in new
chr1	40040766	40067556	chr1:40040766-40067556	0	+	40059346	40067556	789624	9	17,65,122,104,78,144,86,106,17,	0,662,18570,19300,20968,23460,23707,25448,26773,
#Partially deleted in new
chr1	40040779	40066218	chr1:40040779-40066218	0	+	40059346	40066218	789624	8	22,50,122,104,78,144,86,4,	0,16666,18557,19287,20955,23447,23694,25435,
#Partially deleted in new
chr1	40040779	40066295	chr1:40040779-40066295	0	+	40059346	40066295	789624	8	22,65,122,104,78,144,86,81,	0,649,18557,19287,20955,23447,23694,25435,
#Partially deleted in new
chr1	40040881	40060130	chr1:40040881-40060130	0	+	40059346	40060130	789624	3	84,125,64,	0,18452,19185,
#Partially deleted in new
chr1	40067269	40071581	chr1:40067269-40071581	0	+	40067269	40067269	8553170	7	42,178,185,124,83,144,132,	0,270,2420,2889,3160,3566,4180,
#Partially deleted in new
chr1	40069565	40071645	chr1:40069565-40071645	0	+	40069565	40069565	8553170	5	309,124,83,144,196,	0,593,864,1270,1884,
#Deleted in new
chr1	40070469	40071683	chr1:40070469-40071683	0	+	40070469	40070469	8553170	2	510,234,	0,980,
#Partially deleted in new
chr1	40071460	40097727	chr1:40071460-40097727	3	-	40074060	40097238	0	9	2723,72,99,91,103,71,128,110,613,	0,5381,7099,8936,17949,19868,20584,20937,25654,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	40072709	40097247	chr1:40072709-40097247	1	-	40074060	40097238	789624	10	1474,72,99,91,103,71,128,110,87,133,	0,4132,5850,7687,16700,18619,19335,19688,21223,24405,
#Partially deleted in new
chr1	40072711	40082321	chr1:40072711-40082321	1	-	40074060	40078628	789624	5	1472,72,99,91,138,	0,4130,5848,7685,9472,
#Partially deleted in new
chr1	40072718	40097216	chr1:40072718-40097216	0	-	40074100	40097216	789624	9	1465,184,99,91,103,71,128,110,102,	0,4011,5841,7678,16691,18610,19326,19679,24396,
#Partially deleted in new
chr1	40072725	40097252	chr1:40072725-40097252	1	-	40074060	40097238	789624	9	1458,72,99,91,103,71,128,107,138,	0,4116,5834,7671,16684,18603,19319,19672,24389,
#Partially deleted in new
chr1	40072725	40097252	chr1:40072725-40097252	0	-	40089568	40097238	789624	9	1458,72,99,91,173,71,128,110,138,	0,4116,5834,7671,16684,18603,19319,19672,24389,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	40072725	40097254	chr1:40072725-40097254	1	-	40075137	40097238	789624	10	1458,116,72,99,91,103,71,128,110,140,	0,2404,4116,5834,7671,16684,18603,19319,19672,24389,
#Partially deleted in new
chr1	40072728	40097252	chr1:40072728-40097252	1	-	40074060	40097238	789624	8	1455,99,91,103,71,128,110,138,	0,5831,7668,16681,18600,19316,19669,24386,
#Partially deleted in new
chr1	40072737	40097260	chr1:40072737-40097260	1	-	40074060	40097238	0	6	1446,72,99,91,103,146,	0,4104,5822,7659,16672,24377,
#Partially deleted in new
chr1	40072737	40097250	chr1:40072737-40097250	0	-	40072737	40072737	8553170	8	1446,72,99,91,103,71,463,136,	0,4104,5822,7659,16672,18591,19307,24377,
#Partially deleted in new
chr1	40072737	40097254	chr1:40072737-40097254	0	-	40092483	40097238	789624	9	1446,72,99,91,103,71,128,103,140,	0,4104,5822,7659,16672,18591,19307,19660,24377,
#Partially deleted in new
chr1	40072937	40097245	chr1:40072937-40097245	0	-	40074060	40097238	0	10	520,511,72,99,91,103,71,128,110,131,	0,735,3904,5622,7459,16472,18391,19107,19460,24177,
#Partially deleted in new
chr1	40073785	40091373	chr1:40073785-40091373	0	-	40074167	40091373	789624	4	398,72,103,45,	0,3056,15624,17543,
#Partially deleted in new
chr1	40073815	40078835	chr1:40073815-40078835	0	-	40073815	40073815	8553170	4	368,72,99,24,	0,3026,4744,4996,
#Partially deleted in new
chr1	40074023	40097242	chr1:40074023-40097242	0	-	40080452	40097238	789624	5	160,72,99,91,128,	0,2818,4536,6373,23091,
#Partially deleted in new
chr1	40074126	40097252	chr1:40074126-40097252	0	-	40074126	40097238	789624	7	57,72,99,91,71,110,138,	0,2715,4433,6270,17202,18271,22988,
#Partially deleted in new
chr1	40080446	40097245	chr1:40080446-40097245	0	-	40092467	40097238	789624	6	41,103,71,128,110,135,	0,8963,10882,11598,11951,16664,
#Partially deleted in new
chr1	40089494	40097212	chr1:40089494-40097212	0	-	40097106	40097212	789624	5	18,71,128,110,404,	0,1834,2550,2903,7314,
#Partially deleted in new
chr1	40089515	40097252	chr1:40089515-40097252	0	-	40092483	40097238	789624	5	67,71,128,103,138,	0,1813,2529,2882,7599,
#Partially deleted in new
chr1	40132763	40133448	chr1:40132763-40133448	7	+	40132763	40132763	16724991	1	685,	0,
#Partially deleted in new
chr1	40161372	40240921	chr1:40161372-40240921	3	+	40161399	40240447	789624	8	264,155,82,133,203,137,142,5130,	0,27682,29399,34259,41039,61201,70144,74419,
#Partially deleted in new
chr1	40177842	40177949	chr1:40177842-40177949	3	+	40177842	40177842	8553170	1	107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	40245946	40251683	chr1:40245946-40251683	0	+	40245946	40245946	8553170	3	36,114,401,	0,1388,5336,
#Partially deleted in new
chr1	40247900	40251691	chr1:40247900-40251691	3	+	40247993	40251594	789624	2	330,409,	0,3382,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	40256426	40257967	chr1:40256426-40257967	3	-	40256426	40256426	8553170	1	1541,	0,
#Partially deleted in new
chr1	40258106	40294184	chr1:40258106-40294184	3	+	40258271	40292669	0	10	288,147,87,117,153,142,185,105,144,1740,	0,2732,9679,10312,11868,13787,23236,27818,32747,34338,
#Deleted in new
chr1	40262671	40262984	chr1:40262671-40262984	7	-	40262671	40262671	16724991	1	313,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	40290644	40292621	chr1:40290644-40292621	0	+	40290644	40290644	8553170	2	353,177,	0,1800,
#Partially deleted in new
chr1	40300486	40317294	chr1:40300486-40317294	3	-	40301181	40317197	0	32	895,78,189,55,147,33,45,36,72,54,54,54,45,54,54,54,54,54,54,54,54,57,48,54,54,24,36,54,63,36,75,172,	0,1325,2134,2644,3043,3320,3441,3577,3833,3989,4307,5228,5656,6959,7216,7705,9451,9624,9777,10227,10606,10743,11013,11175,11572,11969,12087,12244,13718,13865,15103,16636,
#Partially deleted in new
chr1	40300667	40317388	chr1:40300667-40317388	0	-	40300667	40300667	8553170	31	714,78,189,55,147,33,45,36,72,54,54,54,45,54,54,54,54,54,54,54,54,57,48,54,421,36,54,63,36,75,35,	0,1144,1953,2463,2862,3139,3260,3396,3652,3808,4126,5047,5475,6778,7035,7524,9270,9443,9596,10046,10425,10562,10832,10994,11391,11906,12063,13537,13684,14922,16686,
#Deleted in new
chr1	40301811	40304997	chr1:40301811-40304997	0	-	40301811	40301811	8553170	11	78,189,55,147,33,45,36,72,54,54,72,	0,809,1319,1718,1995,2116,2252,2508,2664,2982,3114,
#Deleted in new
chr1	40302620	40304501	chr1:40302620-40304501	0	-	40302620	40302620	8553170	7	189,147,33,45,36,72,26,	0,909,1186,1307,1443,1699,1855,
#Partially deleted in new
chr1	40310110	40315438	chr1:40310110-40315438	0	-	40310110	40310110	8553170	14	54,54,54,54,57,48,54,54,24,36,54,63,36,201,	0,153,603,982,1119,1389,1551,1948,2345,2463,2620,4094,4241,5127,
#Partially deleted in new
chr1	40310289	40316690	chr1:40310289-40316690	0	-	40310289	40312751	789624	14	28,54,54,57,48,54,54,24,36,54,63,36,75,40,	0,424,803,940,1210,1372,1769,2166,2284,2441,3915,4062,5300,6361,
#Partially deleted in new
chr1	40311499	40316702	chr1:40311499-40316702	0	-	40311499	40311499	8553170	11	48,54,54,24,36,54,63,36,172,75,52,	0,162,559,956,1074,1231,2705,2852,3738,4090,5151,
#Partially deleted in new
chr1	40311670	40317267	chr1:40311670-40317267	0	-	40311670	40317197	789624	4	45,54,75,145,	0,388,3919,5452,
#Partially deleted in new
chr1	40312229	40317813	chr1:40312229-40317813	0	-	40312229	40312229	8553170	9	250,36,54,63,36,228,75,187,226,	0,344,501,1975,2122,3008,3360,4893,5358,
#Partially deleted in new
chr1	40312598	40316104	chr1:40312598-40316104	0	-	40312598	40312751	789624	6	11,54,63,36,71,260,	0,132,1606,1753,2991,3246,
#Deleted in new
chr1	40315239	40316035	chr1:40315239-40316035	0	-	40315239	40315239	8553170	3	226,75,191,	0,350,605,
#Deleted in new
chr1	40315392	40317273	chr1:40315392-40317273	0	-	40315392	40315392	8553170	2	272,151,	0,1730,
#Deleted in new
chr1	40333077	40333557	chr1:40333077-40333557	7	-	40333077	40333077	16724991	1	480,	0,
#Partially deleted in new
chr1	40344849	40414240	chr1:40344849-40414240	0	+	40362381	40414240	789624	7	61,137,134,86,79,87,82,	0,17450,61886,63803,64907,68166,69309,
#Deleted in new
chr1	40364765	40365183	chr1:40364765-40365183	7	+	40364765	40364765	16724991	1	418,	0,
#Partially deleted in new
chr1	40373696	40423326	chr1:40373696-40423326	2	+	40374120	40422101	0	10	527,134,86,79,87,82,110,166,317,1351,	0,33039,34956,36060,39319,40462,41575,42479,43083,48279,
#Partially deleted in new
chr1	40374647	40423326	chr1:40374647-40423326	0	+	40374695	40422101	0	10	61,134,86,79,87,82,110,166,317,1351,	0,32088,34005,35109,38368,39511,40624,41528,42132,47328,
#Partially deleted in new
chr1	40393344	40423324	chr1:40393344-40423324	1	+	40393416	40422101	789624	10	160,134,86,79,87,82,110,166,317,1349,	0,13391,15308,16412,19671,20814,21927,22831,23435,28631,
#Partially deleted in new
chr1	40396799	40423324	chr1:40396799-40423324	1	+	40408655	40422101	0	10	91,134,86,79,87,82,110,166,317,1349,	0,9936,11853,12957,16216,17359,18472,19376,19980,25176,
#Partially deleted in new
chr1	40413976	40415369	chr1:40413976-40415369	0	+	40413976	40413976	8553170	2	264,98,	0,1295,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	40436198	40450039	chr1:40436198-40450039	3	-	40436198	40436198	8553170	5	250,80,81,42,220,	0,333,2121,2326,13621,
#Partially deleted in new
chr1	40450101	40463714	chr1:40450101-40463714	0	+	40450101	40450101	8553170	5	74,433,86,495,1294,	0,554,4101,6843,12319,
#Partially deleted in new
chr1	40450106	40463718	chr1:40450106-40463718	3	+	40450961	40463589	789624	6	69,433,86,127,96,1298,	0,549,4096,6838,7237,12314,
#Partially deleted in new
chr1	40450106	40463680	chr1:40450106-40463680	1	+	40450961	40462466	789624	5	69,424,127,96,1260,	0,558,6838,7237,12314,
#Partially deleted in new
chr1	40450664	40463716	chr1:40450664-40463716	1	+	40450961	40463589	789624	5	424,86,127,96,1296,	0,3538,6280,6679,11756,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	40464318	40466767	chr1:40464318-40466767	3	+	40464318	40464318	8553170	1	2449,	0,
#Deleted in new
chr1	40473054	40474059	chr1:40473054-40474059	3	+	40473054	40473054	8553170	1	1005,	0,
#Partially deleted in new
chr1	40477214	40496343	chr1:40477214-40496343	3	+	40479361	40496059	789624	6	680,453,92,127,96,1423,	0,1821,4548,11873,12314,17706,
#Partially deleted in new
chr1	40477629	40496288	chr1:40477629-40496288	1	+	40479361	40496059	789624	6	265,156,92,127,96,1368,	0,1703,4133,11458,11899,17291,
#Partially deleted in new
chr1	40489145	40491156	chr1:40489145-40491156	0	+	40489145	40489145	8553170	3	69,96,377,	0,383,1634,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	40493156	40508661	chr1:40493156-40508661	3	-	40493156	40493156	8553170	2	532,73,	0,15432,
#Partially deleted in new
chr1	40508740	40516036	chr1:40508740-40516036	1	+	40514544	40515666	789624	4	137,175,58,1522,	0,710,992,5774,
#Partially deleted in new
chr1	40508746	40516037	chr1:40508746-40516037	1	+	40514544	40515666	789624	2	1044,1523,	0,5768,
#Partially deleted in new
chr1	40508753	40515222	chr1:40508753-40515222	0	+	40514544	40515222	789624	2	155,708,	0,5761,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	40508760	40516556	chr1:40508760-40516556	3	+	40514544	40515666	789624	3	117,58,2042,	0,972,5754,
#Partially deleted in new
chr1	40508766	40514846	chr1:40508766-40514846	0	+	40514544	40514846	789624	4	123,175,58,332,	0,684,966,5748,
#Partially deleted in new
chr1	40508774	40515216	chr1:40508774-40515216	0	+	40514544	40515216	789624	2	103,702,	0,5740,
#Partially deleted in new
chr1	40508789	40515027	chr1:40508789-40515027	0	+	40514544	40515027	789624	4	119,175,58,513,	0,661,943,5725,
#Partially deleted in new
chr1	40508797	40515286	chr1:40508797-40515286	0	+	40514544	40515286	789624	3	111,58,772,	0,935,5717,
#Partially deleted in new
chr1	40508805	40515286	chr1:40508805-40515286	0	+	40514544	40515286	789624	2	84,772,	0,5709,
#Partially deleted in new
chr1	40509084	40514623	chr1:40509084-40514623	0	+	40509084	40509084	8553170	2	265,109,	0,5430,
#Deleted in new
chr1	40514460	40515057	chr1:40514460-40515057	3	-	40514460	40514460	8553170	2	174,258,	0,339,
#Partially deleted in new
chr1	40515753	40517174	chr1:40515753-40517174	3	-	40515753	40515753	8553170	2	366,180,	0,1241,
#Partially deleted in new
chr1	40531560	40548169	chr1:40531560-40548169	3	+	40533166	40547460	789624	5	227,39,127,96,1608,	0,1582,9025,10054,15001,
#Partially deleted in new
chr1	40531572	40548110	chr1:40531572-40548110	1	+	40533166	40547460	8553170	6	215,76,39,127,96,1549,	0,1160,1570,9013,10042,14989,
#Partially deleted in new
chr1	40531652	40546765	chr1:40531652-40546765	0	+	40531652	40531652	8553170	4	135,127,96,204,	0,8933,9962,14909,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	40531662	40545037	chr1:40531662-40545037	1	+	40533166	40544456	789624	5	125,39,127,96,622,	0,1480,8923,9952,12753,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	40531662	40545037	chr1:40531662-40545037	1	+	40533166	40544518	789624	5	125,39,127,96,641,	0,1480,8923,9952,12734,
#Partially deleted in new
chr1	40531721	40547785	chr1:40531721-40547785	0	+	40531721	40531721	8553170	3	66,39,1224,	0,1421,14840,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	40541313	40546708	chr1:40541313-40546708	0	+	40541313	40541313	8553170	2	397,147,	0,5248,
#Deleted in new
chr1	40563533	40563659	chr1:40563533-40563659	7	+	40563533	40563533	16724991	1	126,	0,
#Deleted in new
chr1	40593632	40594353	chr1:40593632-40594353	7	-	40593632	40593632	16724991	1	721,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	40620678	40665657	chr1:40620678-40665657	3	-	40626516	40641925	789624	8	6051,140,102,113,142,248,175,264,	0,8131,8592,12390,15237,21030,26989,44715,
#Partially deleted in new
chr1	40626213	40665445	chr1:40626213-40665445	1	-	40626516	40641925	789624	8	516,140,102,113,142,248,95,52,	0,2596,3057,6855,9702,15495,21454,39180,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	40690379	40692066	chr1:40690379-40692066	3	-	40690379	40690379	8553170	1	1687,	0,
#Partially deleted in new
chr1	40691647	40758448	chr1:40691647-40758448	0	+	40691647	40691647	8553170	6	220,113,72,114,96,328,	0,47188,55886,57925,61503,66473,
#Partially deleted in new
chr1	40691685	40767243	chr1:40691685-40767243	0	+	40691685	40691685	8553170	5	182,113,174,159,648,	0,47150,66435,71202,74910,
#Partially deleted in new
chr1	40691688	40771126	chr1:40691688-40771126	1	+	40738843	40770828	0	9	179,113,72,96,174,159,108,60,418,	0,47147,55845,61462,66432,71199,74907,77667,79020,
#Partially deleted in new
chr1	40691708	40771603	chr1:40691708-40771603	3	+	40738843	40770828	0	10	159,113,72,114,96,174,159,108,60,895,	0,47127,55825,57864,61442,66412,71179,74887,77647,79000,
#Partially deleted in new
chr1	40691715	40771139	chr1:40691715-40771139	1	+	40738843	40770828	0	11	152,113,72,114,96,174,159,108,57,60,431,	0,47120,55818,57857,61435,66405,71172,74880,75202,77640,78993,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	40691716	40753246	chr1:40691716-40753246	0	+	40738843	40753246	789624	6	151,104,113,72,114,96,	0,31972,47119,55817,57856,61434,
#Partially deleted in new
chr1	40691742	40771601	chr1:40691742-40771601	1	+	40738843	40770828	0	10	125,113,72,114,96,174,159,108,60,890,	0,47093,55791,57830,61408,66378,71145,74853,77613,78969,
#Partially deleted in new
chr1	40692007	40747584	chr1:40692007-40747584	0	+	40738843	40747584	789624	5	193,67,150,113,51,	0,31200,43593,46828,55526,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	40692012	40771106	chr1:40692012-40771106	1	+	40738843	40770828	0	15	188,140,72,99,67,104,113,72,114,96,174,57,108,60,398,	0,3593,20385,29593,31195,31676,46823,55521,57560,61138,66108,70977,74583,77343,78696,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	40692289	40766687	chr1:40692289-40766687	0	+	40738843	40766687	789624	9	58,113,72,114,96,174,159,127,92,	0,46546,55244,57283,60861,65831,70598,71073,74306,
#Partially deleted in new
chr1	40709356	40771603	chr1:40709356-40771603	1	+	40738843	40770828	0	10	260,113,72,114,96,174,159,108,60,1207,	0,29479,38177,40216,43794,48764,53531,57239,59999,61040,
#Partially deleted in new
chr1	40709542	40770940	chr1:40709542-40770940	1	+	40738843	40770828	0	10	74,113,72,114,96,174,159,108,60,232,	0,29293,37991,40030,43608,48578,53345,57053,59813,61166,
#Partially deleted in new
chr1	40734847	40749576	chr1:40734847-40749576	0	+	40738843	40749576	789624	5	186,150,113,72,4,	0,753,3988,12686,14725,
#Partially deleted in new
chr1	40735314	40771093	chr1:40735314-40771093	1	+	40738843	40770828	0	10	436,113,72,114,96,174,159,108,60,385,	0,3521,12219,14258,17836,22806,27573,31281,34041,35394,
#Partially deleted in new
chr1	40738833	40758159	chr1:40738833-40758159	0	+	40738843	40758159	789624	5	115,72,114,96,36,	0,8700,10739,14317,19290,
#Partially deleted in new
chr1	40738835	40762961	chr1:40738835-40762961	0	+	40738843	40762961	789624	5	113,72,114,174,74,	0,8698,10737,19285,24052,
#Partially deleted in new
chr1	40738835	40753216	chr1:40738835-40753216	0	+	40738843	40753216	789624	3	113,114,66,	0,10737,14315,
#Partially deleted in new
chr1	40738837	40771603	chr1:40738837-40771603	1	+	40738843	40770828	0	10	111,72,114,96,174,159,108,57,60,1207,	0,8696,10735,14313,19283,24050,27758,28080,30518,31559,
#Partially deleted in new
chr1	40753212	40771603	chr1:40753212-40771603	0	+	40753212	40771485	789624	5	34,174,159,90,220,	0,4908,9675,13383,18171,
#Deleted in new
chr1	40754354	40754446	chr1:40754354-40754446	3	+	40754354	40754354	5263520	1	92,	0,
#Deleted in new
chr1	40757283	40757372	chr1:40757283-40757372	3	+	40757283	40757283	5263520	1	89,	0,
#Partially deleted in new
chr1	40757952	40766682	chr1:40757952-40766682	0	+	40757952	40757952	8553170	3	342,159,81,	0,4935,8649,
#Deleted in new
chr1	40766089	40766931	chr1:40766089-40766931	0	+	40766089	40766089	8553170	3	142,108,14,	0,506,828,
#Partially deleted in new
chr1	40768645	40771107	chr1:40768645-40771107	0	+	40768645	40768645	8553170	2	770,711,	0,1751,
#Partially deleted in new
chr1	40768729	40771601	chr1:40768729-40771601	0	+	40768729	40768729	8553170	2	686,1279,	0,1593,
#Partially deleted in new
chr1	40783813	40840452	chr1:40783813-40840452	3	+	40784093	40838523	0	14	594,91,127,176,126,111,96,89,162,221,100,132,130,2142,	0,33451,34350,34691,35533,36061,36351,38500,40283,47270,49200,51153,53851,54497,
#Partially deleted in new
chr1	40784011	40840452	chr1:40784011-40840452	1	+	40784093	40838523	0	14	396,91,127,176,126,111,96,89,162,221,100,132,130,2142,	0,33253,34152,34493,35335,35863,36153,38302,40085,47072,49002,50955,53653,54299,
#Partially deleted in new
chr1	40784093	40838523	chr1:40784093-40838523	1	+	40784093	40838523	0	13	314,91,127,176,126,111,96,89,221,100,132,130,213,	0,33171,34070,34411,35253,35781,36071,38220,46990,48920,50873,53571,54217,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	40804845	40805141	chr1:40804845-40805141	3	+	40804845	40804845	8553170	1	296,	0,
#Partially deleted in new
chr1	40817264	40839289	chr1:40817264-40839289	0	+	40817264	40838523	789624	13	91,127,176,126,111,96,89,57,221,100,132,130,979,	0,899,1240,2082,2610,2900,5049,9373,13819,15749,17702,20400,21046,
#Partially deleted in new
chr1	40818963	40840451	chr1:40818963-40840451	0	+	40818963	40818963	8553170	11	27,126,111,96,89,162,221,100,132,130,2141,	0,383,911,1201,3350,5133,12120,14050,16003,18701,19347,
#Partially deleted in new
chr1	40861050	40862366	chr1:40861050-40862366	3	-	40861572	40862127	789624	1	1316,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	40863913	40876670	chr1:40863913-40876670	3	+	40863913	40863913	8553170	3	39,228,204,	0,254,12553,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	40938103	40939763	chr1:40938103-40939763	7	-	40938103	40938103	16724991	3	475,238,208,	0,765,1452,
#Deleted in new
chr1	40942250	40942515	chr1:40942250-40942515	7	-	40942250	40942250	16724991	1	265,	0,
#Partially deleted in new
chr1	40979334	41012565	chr1:40979334-41012565	3	+	40983290	41010245	0	19	495,179,171,101,117,84,81,152,133,89,95,63,44,97,56,97,145,94,908,	0,3943,5486,8037,9259,11830,12430,16582,18059,21694,22825,23779,26716,28114,29324,29459,30110,30826,32323,
#Partially deleted in new
chr1	40979687	41011754	chr1:40979687-41011754	0	+	40979687	40979687	8553170	17	142,179,171,101,117,84,81,152,133,89,95,63,44,232,145,94,97,	0,3590,5133,7684,8906,11477,12077,16229,17706,21341,22472,23426,26363,28971,29757,30473,31970,
#Partially deleted in new
chr1	40979695	41012563	chr1:40979695-41012563	1	+	40983290	41010245	8553170	19	134,179,171,101,117,84,81,152,133,89,95,63,44,97,56,97,145,94,906,	0,3582,5125,7676,8898,11469,12069,16221,17698,21333,22464,23418,26355,27753,28963,29098,29749,30465,31962,
#Partially deleted in new
chr1	40979704	41012479	chr1:40979704-41012479	0	+	40983290	41008797	8553170	18	125,179,171,101,117,84,81,152,133,89,95,63,44,56,97,145,94,822,	0,3573,5116,7667,8889,11460,12060,16212,17689,21324,22455,23409,26346,28954,29089,29740,30456,31953,
#Partially deleted in new
chr1	40979704	41012550	chr1:40979704-41012550	1	+	40983290	41009593	8553170	17	125,179,171,101,117,84,81,152,133,89,95,63,44,97,56,97,3106,	0,3573,5116,7667,8889,11460,12060,16212,17689,21324,22455,23409,26346,27744,28954,29089,29740,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	40979717	41012554	chr1:40979717-41012554	0	+	40983290	40999832	8553170	19	112,179,171,101,117,84,81,152,133,1288,95,63,44,97,56,97,145,94,897,	0,3560,5103,7654,8876,11447,12047,16199,17676,20112,22442,23396,26333,27731,28941,29076,29727,30443,31940,
#Partially deleted in new
chr1	40979720	41012539	chr1:40979720-41012539	1	+	40983290	41010245	8553170	20	109,158,179,171,101,117,84,81,152,133,89,95,63,44,97,56,97,145,94,882,	0,1165,3557,5100,7651,8873,11444,12044,16196,17673,21308,22439,23393,26330,27728,28938,29073,29724,30440,31937,
#Partially deleted in new
chr1	40979740	41012546	chr1:40979740-41012546	0	+	40979740	40979740	8553170	18	89,179,171,101,117,84,81,152,133,89,95,63,44,97,232,145,94,889,	0,3537,5080,7631,8853,11424,12024,16176,17653,21288,22419,23373,26310,27708,28918,29704,30420,31917,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	40979756	41012470	chr1:40979756-41012470	0	+	40979756	40979756	8553170	18	73,179,171,101,117,84,81,1610,89,95,63,44,97,56,97,145,94,813,	0,3521,5064,7615,8837,11408,12008,16160,21272,22403,23357,26294,27692,28902,29037,29688,30404,31901,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	40979757	41004250	chr1:40979757-41004250	1	+	40983290	41004114	8553170	13	72,179,171,101,117,84,81,152,133,89,95,63,270,	0,3520,5063,7614,8836,11407,12007,16159,17636,21271,22402,23356,24223,
#Partially deleted in new
chr1	40980107	40984988	chr1:40980107-40984988	0	+	40983290	40984988	8553170	3	454,179,168,	0,3170,4713,
#Partially deleted in new
chr1	40980584	40983445	chr1:40980584-40983445	0	+	40980584	40980584	8553170	2	645,168,	0,2693,
#Partially deleted in new
chr1	40981926	40996357	chr1:40981926-40996357	0	+	40981926	40981926	8553170	8	68,179,171,101,117,84,81,441,	0,1351,2894,5445,6667,9238,9838,13990,
#Partially deleted in new
chr1	40983160	41011779	chr1:40983160-41011779	1	+	40983290	41010245	0	18	296,171,101,117,84,81,152,133,89,95,63,44,97,56,97,145,94,122,	0,1660,4211,5433,8004,8604,12756,14233,17868,18999,19953,22890,24288,25498,25633,26284,27000,28497,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	40983286	41012549	chr1:40983286-41012549	0	+	40983286	40983286	8553170	18	170,171,101,117,84,81,1610,132,89,95,63,44,97,56,97,145,94,892,	0,1534,4085,5307,7878,8478,12630,17148,17742,18873,19827,22764,24162,25372,25507,26158,26874,28371,
#Partially deleted in new
chr1	40988518	41012056	chr1:40988518-41012056	1	+	40988623	41010245	789624	15	192,84,81,152,133,89,95,63,44,97,56,97,145,94,399,	0,2646,3246,7398,8875,12510,13641,14595,17532,18930,20140,20275,20926,21642,23139,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	40993852	41012546	chr1:40993852-41012546	0	+	40993852	40993852	8553170	9	3674,89,95,63,44,232,145,94,889,	0,7176,8307,9261,12198,14806,15592,16308,17805,
#Partially deleted in new
chr1	40995978	41011987	chr1:40995978-41011987	0	+	40995978	41001017	8553170	12	90,133,145,95,63,44,97,56,97,145,94,330,	0,1415,4994,6181,7135,10072,11470,12680,12815,13466,14182,15679,
#Partially deleted in new
chr1	41001538	41009589	chr1:41001538-41009589	0	+	41001538	41001538	8553170	8	46,95,63,44,97,56,97,145,	0,621,1575,4512,5910,7120,7255,7906,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	41014589	41043890	chr1:41014589-41043890	3	+	41014589	41014589	789624	4	3812,180,32,776,	0,13943,23456,28525,
#Partially deleted in new
chr1	41015596	41021715	chr1:41015596-41021715	1	-	41016105	41020660	789624	5	632,144,522,553,100,	0,1637,2038,4629,6019,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	41015596	41023237	chr1:41015596-41023237	3	-	41016105	41020660	789624	4	632,144,522,3012,	0,1637,2038,4629,
#Partially deleted in new
chr1	41015596	41021743	chr1:41015596-41021743	1	-	41016105	41020660	789624	6	632,144,345,553,70,121,	0,1637,2038,4629,5267,6026,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	41015596	41021725	chr1:41015596-41021725	1	-	41016105	41020660	789624	3	632,522,1500,	0,2038,4629,
#Partially deleted in new
chr1	41015596	41021725	chr1:41015596-41021725	1	-	41016105	41020660	789624	6	632,144,522,553,70,196,	0,1637,2038,4629,5267,5933,
#Partially deleted in new
chr1	41027199	41161481	chr1:41027199-41161481	1	-	41028193	41143076	0	12	1120,143,180,192,201,127,233,244,89,235,24,118,	0,1384,10162,19207,21490,43395,48019,86083,89722,115678,133675,134164,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	41027199	41161481	chr1:41027199-41161481	1	-	41028193	41159730	0	13	1120,143,180,192,201,127,233,244,89,235,209,24,118,	0,1384,10162,19207,21490,43395,48019,86083,89722,115678,132525,133675,134164,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	41027199	41161481	chr1:41027199-41161481	1	-	41028193	41143076	0	14	1120,143,180,192,201,127,233,244,89,235,71,209,24,118,	0,1384,10162,19207,21490,43395,48019,86083,89722,115678,124414,132525,133675,134164,
#Partially deleted in new
chr1	41027199	41152674	chr1:41027199-41152674	1	-	41028193	41152674	0	13	1120,143,66,180,192,201,127,233,244,89,235,71,76,	0,1384,6783,10162,19207,21490,43395,48019,86083,89722,115678,124414,125399,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	41027199	41161433	chr1:41027199-41161433	1	-	41028193	41143076	0	15	1120,143,66,180,192,201,127,233,244,89,235,71,209,24,70,	0,1384,6783,10162,19207,21490,43395,48019,86083,89722,115678,124414,132525,133675,134164,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	41027201	41160898	chr1:41027201-41160898	1	-	41028193	41152674	0	15	1118,143,66,180,192,201,127,233,244,89,235,71,143,209,24,	0,1382,6781,10160,19205,21488,43393,48017,86081,89720,115676,124412,125397,132523,133673,
#Partially deleted in new
chr1	41027201	41242110	chr1:41027201-41242110	1	-	41028193	41186133	0	15	1118,143,180,192,201,127,233,244,89,235,71,24,69,130,52,	0,1382,10160,19205,21488,43393,48017,86081,89720,115676,124412,133673,134162,158919,214857,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	41027201	41163017	chr1:41027201-41163017	1	-	41028193	41143076	0	15	1118,143,66,180,192,201,127,233,244,89,235,71,24,69,239,	0,1382,6781,10160,19205,21488,43393,48017,86081,89720,115676,124412,133673,134162,135577,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	41027201	41242116	chr1:41027201-41242116	1	-	41028193	41143076	0	16	1118,143,180,192,201,127,233,244,89,235,71,209,24,69,130,58,	0,1382,10160,19205,21488,43393,48017,86081,89720,115676,124412,132523,133673,134162,158919,214857,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	41027201	41242116	chr1:41027201-41242116	3	-	41028193	41159730	0	15	1118,143,180,192,201,127,233,244,89,235,209,24,69,130,58,	0,1382,10160,19205,21488,43393,48017,86081,89720,115676,132523,133673,134162,158919,214857,
#Partially deleted in new
chr1	41027203	41037452	chr1:41027203-41037452	0	-	41028193	41037452	789624	5	272,163,143,66,91,	0,953,1380,6779,10158,
#Partially deleted in new
chr1	41028191	41159871	chr1:41028191-41159871	1	-	41028193	41159730	0	9	128,143,180,192,201,127,233,235,147,	0,392,9170,18215,20498,42403,47027,114686,131533,
#Partially deleted in new
chr1	41028583	41045836	chr1:41028583-41045836	0	-	41028583	41028583	8553170	3	143,180,124,	0,8778,17129,
#Partially deleted in new
chr1	41028641	41046669	chr1:41028641-41046669	0	-	41028641	41028641	8553170	4	85,66,180,252,	0,5341,8720,17776,
#Partially deleted in new
chr1	41037361	41048760	chr1:41037361-41048760	0	-	41037361	41037361	8553170	4	180,255,181,71,	0,3949,9056,11328,
#Partially deleted in new
chr1	41041421	41070631	chr1:41041421-41070631	0	-	41041421	41041421	8553170	4	144,192,201,37,	0,4985,7268,29173,
#Deleted in new
chr1	41098637	41099136	chr1:41098637-41099136	7	+	41098637	41098637	16724991	1	499,	0,
#Partially deleted in new
chr1	41185983	41242154	chr1:41185983-41242154	0	-	41185983	41185983	8553170	2	267,96,	0,56075,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	41242372	41264558	chr1:41242372-41264558	1	+	41242372	41242372	8553170	3	334,131,158,	0,18370,22028,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	41242574	41284861	chr1:41242574-41284861	3	+	41242574	41242574	8553170	2	132,577,	0,41710,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	41260780	41264553	chr1:41260780-41264553	1	+	41260780	41260780	8553170	3	93,268,153,	0,3060,3620,
#Deleted in new
chr1	41264549	41264862	chr1:41264549-41264862	7	-	41264549	41264549	16724991	1	313,	0,
#Partially deleted in new
chr1	41361921	41383590	chr1:41361921-41383590	0	+	41361921	41361921	8553170	2	423,1975,	0,19694,
#Partially deleted in new
chr1	41361930	41382678	chr1:41361930-41382678	3	+	41361930	41382678	789624	3	414,585,477,	0,19685,20271,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	41375003	41375669	chr1:41375003-41375669	3	-	41375003	41375003	789624	2	249,145,	0,521,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	41466936	41467028	chr1:41466936-41467028	7	-	41466936	41466936	16724991	1	92,	0,
#Partially deleted in new
chr1	41478774	41484671	chr1:41478774-41484671	3	-	41479408	41484601	789624	5	728,99,123,157,134,	0,2320,3691,5272,5763,
#Partially deleted in new
chr1	41479126	41484673	chr1:41479126-41484673	0	-	41479126	41479126	789624	5	376,99,123,66,136,	0,1968,3339,4920,5411,
#Partially deleted in new
chr1	41479453	41484085	chr1:41479453-41484085	0	-	41479453	41479453	8553170	5	49,175,99,123,39,	0,1247,1641,3012,4593,
#Partially deleted in new
chr1	41479453	41484085	chr1:41479453-41484085	0	-	41479453	41479453	8553170	5	49,123,169,52,39,	0,3012,3456,4296,4593,
#Partially deleted in new
chr1	41479453	41484085	chr1:41479453-41484085	0	-	41479453	41479453	8553170	5	49,99,123,52,39,	0,1641,3012,4296,4593,
#Partially deleted in new
chr1	41506364	41918498	chr1:41506364-41918498	3	-	41510450	41584797	789624	9	4902,935,87,176,146,5582,199,80,86,	0,6451,12037,18370,69179,73372,122384,194551,412048,
#Partially deleted in new
chr1	41506364	41918707	chr1:41506364-41918707	1	-	41510450	41584797	789624	8	4899,935,87,176,146,5582,199,295,	0,6451,12037,18370,69179,73372,122384,412048,
#Partially deleted in new
chr1	41506364	41662325	chr1:41506364-41662325	1	-	41510450	41584797	789624	8	4899,935,87,176,146,5582,199,192,	0,6451,12037,18370,69179,73372,122384,155769,
#Partially deleted in new
chr1	41510229	41579900	chr1:41510229-41579900	0	-	41510229	41510229	8553170	5	1037,935,87,146,164,	0,2586,8172,65314,69507,
#Deleted in new
chr1	41535442	41535868	chr1:41535442-41535868	3	+	41535442	41535442	8553170	2	183,82,	0,344,
#Deleted in new
chr1	41542068	41544310	chr1:41542068-41544310	7	+	41542068	41542068	16724991	1	2242,	0,
#Partially deleted in new
chr1	41585305	41628816	chr1:41585305-41628816	3	-	41585305	41628816	789624	2	13,68,	0,43443,
#Partially deleted in new
chr1	41847190	42035925	chr1:41847190-42035925	0	-	41847190	41847190	789624	4	1255,219,112,119,	0,1680,71222,188616,
#Partially deleted in new
chr1	41847190	41918669	chr1:41847190-41918669	0	-	41847190	41847190	789624	3	1255,219,257,	0,1680,71222,
#Partially deleted in new
chr1	41847947	41869630	chr1:41847947-41869630	0	-	41847947	41847947	8553170	5	498,219,71,68,84,	0,923,16630,17600,21599,
#Deleted in new
chr1	42040596	42041729	chr1:42040596-42041729	7	+	42040596	42040596	16724991	1	1133,	0,
#Partially deleted in new
chr1	42140634	42141391	chr1:42140634-42141391	7	+	42140634	42140634	16724991	2	61,393,	0,364,
#Deleted in new
chr1	42153420	42155824	chr1:42153420-42155824	3	+	42153450	42155596	0	3	120,187,290,	0,1259,2114,
#Deleted in new
chr1	42162690	42164718	chr1:42162690-42164718	3	-	42162905	42164712	0	3	280,208,81,	0,712,1947,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	42176538	42189809	chr1:42176538-42189809	1	-	42179709	42188923	789624	3	3287,108,1073,	0,5378,12198,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	42176538	42334965	chr1:42176538-42334965	1	-	42179709	42311093	789624	15	3287,108,192,102,417,175,129,102,84,75,325,61,110,144,41,	0,5378,12198,12764,14764,18351,22563,29223,51344,88576,101809,134511,138807,147145,158386,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	42176538	42335877	chr1:42176538-42335877	3	-	42179709	42311093	789624	13	3287,108,192,102,417,175,129,102,84,75,325,61,252,	0,5378,12198,12764,14764,18351,22563,29223,51344,88576,101809,134511,159087,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	42176544	42335232	chr1:42176544-42335232	1	-	42179709	42311093	789624	13	3281,108,192,102,417,175,129,102,84,75,325,61,174,	0,5372,12192,12758,14758,18345,22557,29217,51338,88570,101803,134505,158514,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	42176544	42335215	chr1:42176544-42335215	1	-	42179709	42311093	789624	12	3281,108,192,102,417,175,129,84,75,325,61,157,	0,5372,12192,12758,14758,18345,22557,51338,88570,101803,134505,158514,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	42176544	42315459	chr1:42176544-42315459	1	-	42179709	42311093	789624	13	3281,108,192,102,417,175,129,102,84,75,325,61,114,	0,5372,12192,12758,14758,18345,22557,29217,51338,88570,101803,134505,138801,
#Partially deleted in new
chr1	42191405	42335221	chr1:42191405-42335221	0	-	42191405	42311093	789624	8	314,175,129,84,75,325,61,163,	0,3484,7696,36477,73709,86942,119644,143653,
#Partially deleted in new
chr1	42194996	42206011	chr1:42194996-42206011	0	-	42194996	42205824	789624	3	68,129,250,	0,4105,10765,
#Partially deleted in new
chr1	42264930	42278587	chr1:42264930-42278587	0	-	42265051	42278587	789624	2	259,240,	0,13417,
#Partially deleted in new
chr1	42335385	42338376	chr1:42335385-42338376	3	-	42335385	42335385	8553170	2	210,451,	0,2540,
#Partially deleted in new
chr1	42380794	42410165	chr1:42380794-42410165	0	+	42399612	42410165	789624	5	303,61,231,87,182,	0,15645,18609,23716,29189,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	42380805	42422578	chr1:42380805-42422578	3	+	42380934	42414974	789624	5	292,231,87,204,8095,	0,18598,23705,29178,33678,
#Deleted in new
chr1	42412397	42412794	chr1:42412397-42412794	7	-	42412397	42412397	16724991	1	397,	0,
#Partially deleted in new
chr1	42430328	42456267	chr1:42430328-42456267	3	-	42430735	42455997	789624	8	530,146,112,123,170,172,142,380,	0,2814,4945,6092,9527,18138,19589,25559,
#Partially deleted in new
chr1	42430414	42456253	chr1:42430414-42456253	0	-	42439899	42455997	789624	7	444,146,112,123,170,142,366,	0,2728,4859,6006,9441,19503,25473,
#Partially deleted in new
chr1	42432859	42435522	chr1:42432859-42435522	0	-	42432859	42432859	8553170	2	429,249,	0,2414,
#Partially deleted in new
chr1	42436420	42456011	chr1:42436420-42456011	0	-	42440000	42455997	789624	3	123,170,124,	0,3435,19467,
#Partially deleted in new
chr1	42456116	42460081	chr1:42456116-42460081	1	+	42457257	42459926	0	3	383,104,479,	0,1130,3486,
#Deleted in new
chr1	42456538	42457504	chr1:42456538-42457504	1	+	42456565	42457380	789624	2	535,258,	0,708,
#Partially deleted in new
chr1	42456543	42460412	chr1:42456543-42460412	0	+	42456543	42456543	8553170	2	807,810,	0,3059,
#Partially deleted in new
chr1	42456558	42460414	chr1:42456558-42460414	3	+	42456565	42459926	0	3	515,104,812,	0,688,3044,
#Partially deleted in new
chr1	42456560	42460414	chr1:42456560-42460414	1	+	42456565	42459606	789624	3	68,104,812,	0,686,3042,
#Partially deleted in new
chr1	42456800	42473385	chr1:42456800-42473385	0	+	42456800	42456800	8553170	3	273,104,264,	0,446,16321,
#Partially deleted in new
chr1	42457293	42460016	chr1:42457293-42460016	0	+	42457293	42457293	8553170	2	274,414,	0,2309,
#Partially deleted in new
chr1	42463329	42482996	chr1:42463329-42482996	0	+	42463329	42463329	8553170	3	561,106,334,	0,17131,19333,
#Partially deleted in new
chr1	42463353	42654340	chr1:42463353-42654340	1	+	42473285	42654028	789624	21	304,182,154,72,116,99,126,138,170,250,180,210,155,163,113,142,137,115,183,68,523,	0,9768,19309,26804,33744,35464,73122,75819,82056,92802,102942,113666,118006,125967,147624,173883,179119,181339,182781,190022,190464,
#Partially deleted in new
chr1	42463353	42654186	chr1:42463353-42654186	0	+	42577070	42654028	789624	23	304,182,106,154,72,116,99,101,126,170,250,138,180,210,155,163,113,142,137,115,183,68,369,	0,9768,17107,19309,26804,33744,35464,71535,73122,82056,92802,94785,102942,113666,118006,125967,147624,173883,179119,181339,182781,190022,190464,
#Partially deleted in new
chr1	42463425	42473417	chr1:42463425-42473417	0	+	42463425	42463425	8553170	2	232,296,	0,9696,
#Partially deleted in new
chr1	42463921	42473560	chr1:42463921-42473560	0	+	42463921	42463921	8553170	2	296,439,	0,9200,
#Partially deleted in new
chr1	42467743	42473385	chr1:42467743-42473385	0	+	42467743	42467743	8553170	3	39,59,264,	0,916,5378,
#Partially deleted in new
chr1	42482655	42654181	chr1:42482655-42654181	3	+	42536484	42654028	789624	20	161,72,116,99,101,126,138,170,250,180,210,155,163,113,142,137,115,183,68,364,	0,7502,14442,16162,52233,53820,56517,62754,73500,83640,94364,98704,106665,128322,154581,159817,162037,163479,170720,171162,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	42482693	42537985	chr1:42482693-42537985	0	+	42482693	42482693	8553170	6	123,72,116,99,101,1510,	0,7464,14404,16124,52195,53782,
#Deleted in new
chr1	42491738	42492493	chr1:42491738-42492493	7	+	42491738	42491738	16724991	1	755,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	42497110	42581416	chr1:42497110-42581416	0	+	42497110	42529670	789624	11	103,99,120,101,126,170,250,180,210,150,57,	0,1707,32491,37778,39365,48299,59045,69185,79909,83721,84249,
#Deleted in new
chr1	42500204	42500339	chr1:42500204-42500339	7	-	42500204	42500204	16724991	1	135,	0,
#Partially deleted in new
chr1	42533878	42654190	chr1:42533878-42654190	0	+	42533878	42533878	8553170	17	73,126,99,138,170,250,180,171,58,163,113,142,137,115,183,68,373,	0,2597,3313,5294,11531,22277,32417,43141,47578,55442,77099,103358,108594,110814,112256,119497,119939,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	42534888	42654664	chr1:42534888-42654664	1	+	42536484	42654028	789624	16	101,126,138,170,250,180,210,155,163,113,142,137,115,183,68,847,	0,1587,4284,10521,21267,31407,42131,46471,54432,76089,102348,107584,109804,111246,118487,118929,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	42536572	42595573	chr1:42536572-42595573	0	+	42536572	42536572	8553170	5	29,180,210,155,6253,	0,29723,40447,44787,52748,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	42569032	42569139	chr1:42569032-42569139	3	+	42569032	42569032	8553170	1	107,	0,
#Deleted in new
chr1	42570969	42571390	chr1:42570969-42571390	7	+	42570969	42570969	16724991	1	421,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	42581433	42590461	chr1:42581433-42590461	0	+	42581433	42581433	8553170	3	81,163,147,	0,7887,8881,
#Partially deleted in new
chr1	42658424	42676758	chr1:42658424-42676758	3	+	42658446	42667419	0	10	88,65,24,45,43,93,88,41,90,175,	0,419,803,1097,2437,6438,7555,8122,8926,18159,
#Partially deleted in new
chr1	42658455	42667440	chr1:42658455-42667440	1	+	42659344	42667419	0	9	57,65,143,45,43,93,88,41,90,	0,388,772,1066,2406,6407,7524,8091,8895,
#Partially deleted in new
chr1	42658511	42667397	chr1:42658511-42667397	0	+	42658855	42667397	789624	9	223,65,24,45,43,93,88,41,47,	0,332,716,1010,2350,6351,7468,8035,8839,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	42658686	42682160	chr1:42658686-42682160	3	-	42658686	42658686	8553170	4	940,252,87,762,	0,3612,17033,22712,
#Deleted in new
chr1	42658719	42659365	chr1:42658719-42659365	1	+	42658855	42659348	789624	2	189,138,	0,508,
#Partially deleted in new
chr1	42659244	42660955	chr1:42659244-42660955	0	+	42659456	42660955	789624	2	322,94,	0,1617,
#Partially deleted in new
chr1	42664862	42676758	chr1:42664862-42676758	0	+	42664862	42667419	789624	6	93,88,41,90,40,175,	0,1117,1684,2488,10425,11721,
#Partially deleted in new
chr1	42678734	42681659	chr1:42678734-42681659	3	+	42678734	42678734	8553170	2	135,466,	0,2459,
#Partially deleted in new
chr1	42682426	42702349	chr1:42682426-42702349	3	+	42682565	42701015	0	8	305,64,34,90,303,83,266,369,	0,976,11063,13772,14215,14753,18354,19554,
#Partially deleted in new
chr1	42682439	42697262	chr1:42682439-42697262	0	+	42682565	42697262	789624	5	292,64,34,303,83,	0,963,11050,14202,14740,
#Partially deleted in new
chr1	42682986	42702349	chr1:42682986-42702349	0	+	42682986	42701015	789624	7	379,34,90,303,83,266,369,	0,10503,13212,13655,14193,17794,18994,
#Partially deleted in new
chr1	42683155	42697211	chr1:42683155-42697211	0	+	42683155	42683155	8553170	5	311,34,90,303,32,	0,10334,13043,13486,14024,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	42733092	42740254	chr1:42733092-42740254	3	-	42735085	42740063	789624	5	2042,153,85,165,414,	0,2785,5136,5328,6748,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	42733092	42740254	chr1:42733092-42740254	1	-	42735761	42740063	789624	3	2938,165,414,	0,5328,6748,
#Partially deleted in new
chr1	42734994	42740140	chr1:42734994-42740140	1	-	42735867	42740063	789624	4	1036,85,165,300,	0,3234,3426,4846,
#Partially deleted in new
chr1	42746334	42767084	chr1:42746334-42767084	1	-	42746832	42766971	789624	15	518,160,76,118,151,96,128,122,53,90,140,132,190,153,578,	0,918,1388,1865,3851,5939,6202,8534,8830,9213,11448,12517,12866,15988,20172,
#Partially deleted in new
chr1	42746373	42766989	chr1:42746373-42766989	0	-	42746373	42746373	8553170	14	479,141,76,118,151,96,128,349,90,140,132,190,153,483,	0,898,1349,1826,3812,5900,6163,8495,9174,11409,12478,12827,15949,20133,
#Partially deleted in new
chr1	42746374	42767012	chr1:42746374-42767012	1	-	42746911	42766971	789624	14	1038,76,118,151,96,128,122,53,90,140,132,190,153,506,	0,1348,1825,3811,5899,6162,8494,8790,9173,11408,12477,12826,15948,20132,
#Partially deleted in new
chr1	42746374	42767023	chr1:42746374-42767023	3	-	42746696	42766971	789624	15	478,141,76,118,151,96,128,122,53,90,140,132,190,153,517,	0,897,1348,1825,3811,5899,6162,8494,8790,9173,11408,12477,12826,15948,20132,
#Partially deleted in new
chr1	42746374	42767022	chr1:42746374-42767022	0	-	42746374	42746374	8553170	15	478,141,76,118,151,96,128,349,90,55,140,132,190,153,516,	0,897,1348,1825,3811,5899,6162,8494,9173,10026,11408,12477,12826,15948,20132,
#Deleted in new
chr1	42746507	42747798	chr1:42746507-42747798	0	-	42746507	42746507	8553170	3	345,160,76,	0,745,1215,
#Deleted in new
chr1	42746530	42747576	chr1:42746530-42747576	0	-	42746530	42746530	8553170	2	322,324,	0,722,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	42747722	42755209	chr1:42747722-42755209	0	-	42748292	42755209	789624	8	76,118,151,100,96,128,122,45,	0,477,2463,3918,4551,4814,7146,7442,
#Deleted in new
chr1	42747757	42748743	chr1:42747757-42748743	0	-	42747757	42747757	8553170	2	41,544,	0,442,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	42749900	42754936	chr1:42749900-42754936	0	-	42749900	42749900	8553170	4	436,96,128,68,	0,2373,2636,4968,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	42751724	42754987	chr1:42751724-42754987	0	-	42751724	42751724	8553170	4	110,96,128,119,	0,549,812,3144,
#Partially deleted in new
chr1	42754979	42762403	chr1:42754979-42762403	0	-	42754979	42754979	8553170	6	238,90,163,132,193,81,	0,568,2803,3872,4221,7343,
#Partially deleted in new
chr1	42759256	42767002	chr1:42759256-42767002	0	-	42759256	42766971	789624	3	134,24,496,	0,3066,7250,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	42759985	42767017	chr1:42759985-42767017	0	-	42759985	42759985	8553170	2	2490,511,	0,6521,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	42767268	42779488	chr1:42767268-42779488	3	+	42767311	42775394	789624	5	122,116,87,132,4280,	0,240,6294,7468,7940,
#Partially deleted in new
chr1	42767291	42794493	chr1:42767291-42794493	0	+	42767311	42774786	789624	6	99,132,271,98,144,81,	0,7445,7917,25513,26309,27121,
#Partially deleted in new
chr1	42767305	42789934	chr1:42767305-42789934	3	+	42767311	42773562	789624	5	319,104,132,314,139,	0,6240,7431,7903,22490,
#Partially deleted in new
chr1	42767305	42775759	chr1:42767305-42775759	0	+	42767311	42774786	8553170	3	85,132,551,	0,7431,7903,
#Partially deleted in new
chr1	42773186	42774770	chr1:42773186-42774770	0	+	42773186	42773186	8553170	2	463,34,	0,1550,
#Deleted in new
chr1	42775812	42776790	chr1:42775812-42776790	3	-	42775812	42775812	8553170	2	357,127,	0,851,
#Partially deleted in new
chr1	42785006	42816619	chr1:42785006-42816619	0	+	42789893	42798225	789624	11	76,139,98,144,201,170,78,75,108,120,85,	0,4789,7798,8594,9406,13091,18325,20378,24021,31204,31528,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	42785031	42800818	chr1:42785031-42800818	1	+	42789893	42798225	789624	6	51,139,98,144,201,2721,	0,4764,7773,8569,9381,13066,
#Partially deleted in new
chr1	42787989	42798230	chr1:42787989-42798230	3	+	42789432	42798225	789624	7	75,218,114,98,144,201,133,	0,1278,1831,4815,5611,6423,10108,
#Deleted in new
chr1	42793664	42796794	chr1:42793664-42796794	0	+	42793664	42793664	8553170	3	80,201,235,	0,748,2895,
#Partially deleted in new
chr1	42807051	42816804	chr1:42807051-42816804	1	-	42807413	42816544	789624	3	449,150,51,	0,9379,9702,
#Partially deleted in new
chr1	42807055	42817252	chr1:42807055-42817252	3	-	42807413	42816544	789624	3	445,150,63,	0,9375,10134,
#Partially deleted in new
chr1	42813409	42817252	chr1:42813409-42817252	0	-	42813409	42813409	8553170	3	495,150,63,	0,3021,3780,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	42817087	42844993	chr1:42817087-42844993	3	+	42830448	42843232	789624	12	166,116,90,348,117,33,33,21,21,27,27,2477,	0,8535,13356,13680,17950,18644,20070,21813,22945,23064,23182,25429,
#Partially deleted in new
chr1	42817121	42830774	chr1:42817121-42830774	0	+	42817121	42817121	8553170	3	132,116,331,	0,8501,13322,
#Partially deleted in new
chr1	42817121	42830499	chr1:42817121-42830499	0	+	42830448	42830499	789624	4	132,282,113,56,	0,412,8501,13322,
#Partially deleted in new
chr1	42817122	42842528	chr1:42817122-42842528	0	+	42817122	42817122	8553170	10	131,116,128,29,33,21,21,27,27,12,	0,8500,17915,18609,20035,21778,22910,23029,23147,25394,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	42817123	42844983	chr1:42817123-42844983	0	+	42817123	42817123	8553170	11	130,205,116,117,29,33,21,21,27,27,2467,	0,7424,8499,17914,18608,20034,21777,22909,23028,23146,25393,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	42817139	42839713	chr1:42817139-42839713	0	+	42817139	42817139	8553170	8	114,68,90,348,117,33,33,813,	0,8531,13304,13628,17898,18592,20018,21761,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	42824435	42825790	chr1:42824435-42825790	0	+	42824435	42824435	8553170	2	317,168,	0,1187,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	42825559	42844989	chr1:42825559-42844989	1	+	42830448	42843232	789624	11	179,90,348,117,33,33,21,21,27,27,2473,	0,4884,5208,9478,10172,11598,13341,14473,14592,14710,16957,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	42829914	42844985	chr1:42829914-42844985	0	+	42829914	42829914	8553170	9	1201,117,33,33,21,21,27,27,2469,	0,5123,5817,7243,8986,10118,10237,10355,12602,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	42834680	42846422	chr1:42834680-42846422	3	-	42834680	42834680	8553170	2	451,63,	0,11679,
#Partially deleted in new
chr1	42836927	42846362	chr1:42836927-42846362	1	-	42836927	42836927	8553170	3	251,270,106,	0,742,9329,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	42841897	42846387	chr1:42841897-42846387	0	-	42841897	42841897	8553170	5	116,142,47,100,131,	0,877,1506,2613,4359,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	42841897	42846387	chr1:42841897-42846387	1	-	42841897	42841897	8553170	5	116,142,47,174,131,	0,877,1506,2613,4359,
#Partially deleted in new
chr1	42846572	42852473	chr1:42846572-42852473	1	+	42849658	42851813	789624	4	85,123,178,1524,	0,2718,2992,4377,
#Partially deleted in new
chr1	42846608	42852477	chr1:42846608-42852477	3	+	42850958	42851813	789624	2	49,1528,	0,4341,
#Partially deleted in new
chr1	42846625	42852477	chr1:42846625-42852477	1	+	42850958	42851813	789624	3	32,123,1528,	0,2665,4324,
#Partially deleted in new
chr1	42846627	42852477	chr1:42846627-42852477	1	+	42850958	42851813	789624	4	30,123,178,1528,	0,2663,2937,4322,
#Partially deleted in new
chr1	42846636	42852477	chr1:42846636-42852477	1	+	42850686	42851813	789624	5	21,123,178,85,1528,	0,2654,2928,4022,4313,
#Deleted in new
chr1	42849290	42851264	chr1:42849290-42851264	0	+	42850686	42851264	789624	4	123,178,85,342,	0,274,1368,1632,
#Deleted in new
chr1	42849554	42851754	chr1:42849554-42851754	0	+	42849658	42851754	789624	2	188,805,	0,1395,
#Deleted in new
chr1	42850686	42852473	chr1:42850686-42852473	1	+	42850686	42851813	789624	2	57,1524,	0,263,
#Partially deleted in new
chr1	42886596	42888767	chr1:42886596-42888767	7	-	42886596	42886596	16724991	5	719,394,100,604,145,	0,754,1189,1300,2026,
#Partially deleted in new
chr1	42891093	42892430	chr1:42891093-42892430	7	-	42891093	42891093	16724991	2	1271,55,	0,1282,
#Deleted in new
chr1	42903231	42903912	chr1:42903231-42903912	7	+	42903231	42903231	16724991	1	681,	0,
#Partially deleted in new
chr1	42925374	42959176	chr1:42925374-42959176	3	-	42927040	42958651	0	10	1867,204,102,105,188,163,241,161,96,543,	0,2230,3557,3835,4218,4498,5251,5671,17851,33259,
#Partially deleted in new
chr1	42926155	42958848	chr1:42926155-42958848	0	-	42929774	42958651	789624	9	1086,204,102,105,188,241,161,96,215,	0,1449,2776,3054,3437,4470,4890,17070,32478,
#Partially deleted in new
chr1	42926795	42943238	chr1:42926795-42943238	0	-	42926966	42943238	789624	4	183,241,161,13,	0,3830,4250,16430,
#Partially deleted in new
chr1	42930318	42958859	chr1:42930318-42958859	0	-	42930318	42930318	8553170	4	548,161,96,226,	0,727,12907,28315,
#Partially deleted in new
chr1	42930697	42958836	chr1:42930697-42958836	0	-	42930697	42958651	789624	3	169,161,203,	0,348,27936,
#Partially deleted in new
chr1	42930959	42958868	chr1:42930959-42958868	0	-	42930959	42930959	8553170	3	247,96,235,	0,12266,27674,
#Partially deleted in new
chr1	42942965	42958868	chr1:42942965-42958868	0	-	42942965	42942965	8553170	2	356,235,	0,15668,
#Partially deleted in new
chr1	42951615	42958859	chr1:42951615-42958859	1	-	42951816	42958651	789624	2	315,226,	0,7018,
#Deleted in new
chr1	42951615	42952016	chr1:42951615-42952016	0	-	42951615	42951615	8553170	1	401,	0,
#Deleted in new
chr1	42952201	42952641	chr1:42952201-42952641	7	-	42952201	42952201	16724991	1	440,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	42959048	42983358	chr1:42959048-42983358	3	+	42959048	42959048	789624	4	529,146,215,234,	0,11200,14925,24076,
#Partially deleted in new
chr1	42959064	42961791	chr1:42959064-42961791	0	-	42959064	42959064	8553170	5	208,54,103,102,68,	0,475,1384,1974,2659,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	42959103	42976428	chr1:42959103-42976428	0	+	42959103	42959103	8553170	3	474,146,2455,	0,11145,14870,
#Partially deleted in new
chr1	42959157	42961864	chr1:42959157-42961864	3	-	42959157	42959157	8553170	6	137,54,103,102,222,141,	0,382,1291,1881,2092,2566,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	42991437	42991544	chr1:42991437-42991544	3	+	42991437	42991437	8553170	1	107,	0,
#Deleted in new
chr1	43023548	43023637	chr1:43023548-43023637	3	-	43023548	43023548	8553170	1	89,	0,
#Deleted in new
chr1	43104085	43104497	chr1:43104085-43104497	7	+	43104085	43104085	16724991	1	412,	0,
#Partially deleted in new
chr1	43145152	43156396	chr1:43145152-43156396	1	+	43145248	43156313	789624	4	145,60,104,191,	0,5608,7675,11053,
#Partially deleted in new
chr1	43147866	43156396	chr1:43147866-43156396	0	+	43147866	43147866	8553170	3	225,60,191,	0,2894,8339,
#Partially deleted in new
chr1	43147916	43156396	chr1:43147916-43156396	0	+	43147951	43150797	789624	4	175,60,104,191,	0,2844,4911,8289,
#Partially deleted in new
chr1	43147922	43156279	chr1:43147922-43156279	0	+	43147951	43156279	789624	4	162,60,152,74,	0,2838,4905,8283,
#Partially deleted in new
chr1	43147951	43156396	chr1:43147951-43156396	3	+	43147951	43156313	789624	4	133,60,104,191,	0,2809,4876,8254,
#Partially deleted in new
chr1	43152757	43156396	chr1:43152757-43156396	0	+	43152757	43152757	8553170	2	174,191,	0,3448,
#Partially deleted in new
chr1	43164174	43172570	chr1:43164174-43172570	1	-	43164442	43172421	789624	10	319,163,94,76,90,124,173,84,89,291,	0,468,2651,2985,4764,6581,7304,7711,7878,8105,
#Partially deleted in new
chr1	43164183	43172260	chr1:43164183-43172260	3	-	43164442	43172118	789624	9	310,163,94,76,90,124,173,84,208,	0,459,2642,2976,4755,6572,7295,7702,7869,
#Partially deleted in new
chr1	43164345	43171121	chr1:43164345-43171121	0	-	43164345	43164345	8553170	6	148,163,94,76,90,366,	0,297,2480,2814,4593,6410,
#Deleted in new
chr1	43170817	43172551	chr1:43170817-43172551	0	-	43170817	43170817	8553170	5	62,173,84,89,272,	0,661,1068,1235,1462,
#Deleted in new
chr1	43170943	43172268	chr1:43170943-43172268	0	-	43170943	43170943	8553170	3	708,84,216,	0,942,1109,
#Deleted in new
chr1	43171440	43172282	chr1:43171440-43172282	0	-	43171440	43171440	8553170	2	529,230,	0,612,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	43171609	43270936	chr1:43171609-43270936	0	-	43171609	43171609	8553170	9	42,84,89,149,144,48,77,77,31,	0,276,443,670,1110,39840,43707,90232,99296,
#Deleted in new
chr1	43171651	43171712	chr1:43171651-43171712	3	-	43171651	43171651	5263520	1	61,	0,
#Partially deleted in new
chr1	43172148	43254358	chr1:43172148-43254358	1	+	43172753	43254191	789624	23	305,176,317,287,208,153,140,166,114,213,174,162,156,94,191,174,159,144,117,135,144,133,382,	0,586,9385,11442,13000,14558,25404,26332,27241,34571,37594,43106,47233,49223,49956,50675,51897,54834,60359,62130,62346,71078,81828,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	43172329	43210878	chr1:43172329-43210878	1	+	43172753	43210084	789624	11	124,179,317,287,208,153,140,166,114,213,1136,	0,402,9204,11261,12819,14377,25223,26151,27060,34390,37413,
#Partially deleted in new
chr1	43172329	43254355	chr1:43172329-43254355	3	+	43172753	43254191	789624	24	124,179,317,287,208,153,140,166,114,213,174,162,156,94,191,174,159,144,99,117,135,144,133,379,	0,402,9204,11261,12819,14377,25223,26151,27060,34390,37413,42925,47052,49042,49775,50494,51716,54653,59736,60178,61949,62165,70897,81647,
#Partially deleted in new
chr1	43172343	43183614	chr1:43172343-43183614	0	+	43172753	43183614	789624	4	59,176,317,24,	0,391,9190,11247,
#Partially deleted in new
chr1	43172413	43181679	chr1:43172413-43181679	0	+	43172753	43177155	789624	4	40,179,91,146,	0,318,4707,9120,
#Partially deleted in new
chr1	43172421	43210118	chr1:43172421-43210118	0	+	43172753	43177155	789624	13	32,176,91,317,287,208,153,140,166,114,213,174,23,	0,313,4699,9112,11169,12727,14285,25131,26059,26968,34298,37321,37674,
#Partially deleted in new
chr1	43184877	43186785	chr1:43184877-43186785	0	+	43184877	43184877	8553170	2	479,79,	0,1829,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	43196416	43196536	chr1:43196416-43196536	7	+	43196416	43196416	16724991	1	120,	0,
#Partially deleted in new
chr1	43215355	43222278	chr1:43215355-43222278	0	+	43215355	43219555	789624	4	61,250,94,174,	0,4026,6016,6749,
#Deleted in new
chr1	43269993	43274002	chr1:43269993-43274002	3	+	43272722	43273382	789624	4	92,113,156,1425,	0,687,2190,2584,
#Deleted in new
chr1	43270024	43274002	chr1:43270024-43274002	1	+	43272722	43273382	789624	4	61,208,156,1425,	0,561,2159,2553,
#Deleted in new
chr1	43270046	43270820	chr1:43270046-43270820	0	+	43270046	43270046	8553170	2	39,140,	0,634,
#Deleted in new
chr1	43270945	43272769	chr1:43270945-43272769	0	+	43272722	43272769	789624	3	219,156,192,	0,1238,1632,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	43281882	43285579	chr1:43281882-43285579	3	-	43282784	43283270	789624	3	1225,117,136,	0,1369,3561,
#Partially deleted in new
chr1	43282660	43285617	chr1:43282660-43285617	1	-	43282784	43283270	789624	3	447,117,65,	0,591,2892,
#Partially deleted in new
chr1	43300992	43323108	chr1:43300992-43323108	3	+	43301071	43322722	0	23	137,315,111,156,132,141,129,146,145,159,138,297,291,191,211,111,191,114,71,41,97,100,458,	0,3858,4240,5847,6149,6439,6803,7993,8395,10678,11001,11312,12142,12785,16206,16571,16889,18242,18466,20276,20403,20623,21658,
#Partially deleted in new
chr1	43301071	43308968	chr1:43301071-43308968	1	+	43301071	43308968	0	8	58,315,111,156,132,141,129,98,	0,3779,4161,5768,6070,6360,6724,7799,
#Partially deleted in new
chr1	43302449	43305343	chr1:43302449-43305343	0	+	43302449	43302449	8553170	2	64,493,	0,2401,
#Deleted in new
chr1	43307141	43309045	chr1:43307141-43309045	0	+	43307141	43307141	8553170	3	132,141,60,	0,290,1844,
#Deleted in new
chr1	43309046	43312601	chr1:43309046-43312601	0	+	43309046	43309046	8553170	5	85,145,159,138,124,	0,341,2624,2947,3431,
#Deleted in new
chr1	43313173	43314150	chr1:43313173-43314150	0	+	43313173	43313173	8553170	2	252,373,	0,604,
#Partially deleted in new
chr1	43313187	43315291	chr1:43313187-43315291	0	+	43313187	43313187	8553170	4	238,191,96,131,	0,590,1195,1973,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	43313291	43320880	chr1:43313291-43320880	0	+	43313291	43313291	8553170	4	677,874,114,1422,	0,3907,5943,6167,
#Partially deleted in new
chr1	43317929	43319482	chr1:43317929-43319482	0	+	43317929	43317929	8553170	2	143,248,	0,1305,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	43319462	43320423	chr1:43319462-43320423	0	+	43319462	43319462	8553170	2	67,550,	0,411,
#Partially deleted in new
chr1	43337848	43352772	chr1:43337848-43352772	3	+	43337848	43352772	789624	12	79,133,179,299,163,127,185,143,160,97,88,255,	0,250,693,1422,2115,2538,8596,8943,10994,11414,14367,14669,
#Partially deleted in new
chr1	43337848	43352772	chr1:43337848-43352772	1	+	43337848	43352772	789624	12	79,112,179,299,163,127,185,143,160,97,88,255,	0,271,693,1422,2115,2538,8596,8943,10994,11414,14367,14669,
#Partially deleted in new
chr1	43337848	43349537	chr1:43337848-43349537	0	+	43337848	43337848	8553170	10	79,133,179,299,163,127,185,143,160,275,	0,250,693,1422,2115,2538,8596,8943,10994,11414,
#Partially deleted in new
chr1	43349262	43352736	chr1:43349262-43352736	0	+	43349262	43352736	789624	4	97,126,88,219,	0,574,2953,3255,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	43354683	43358658	chr1:43354683-43358658	3	-	43354683	43354683	8553170	3	323,98,240,	0,3119,3735,
#Partially deleted in new
chr1	43358954	43363203	chr1:43358954-43363203	3	+	43359215	43363129	0	11	52,230,149,97,129,197,95,229,126,118,253,	0,212,535,770,1014,1238,1544,1778,2165,3240,3996,
#Partially deleted in new
chr1	43359012	43363203	chr1:43359012-43363203	1	+	43359215	43363129	0	10	384,149,97,129,197,95,229,126,118,253,	0,477,712,956,1180,1486,1720,2107,3182,3938,
#Deleted in new
chr1	43359766	43360864	chr1:43359766-43360864	0	+	43359766	43359766	8553170	4	331,197,95,132,	0,426,732,966,
#Partially deleted in new
chr1	43361057	43363066	chr1:43361057-43363066	0	+	43361057	43361057	8553170	3	188,118,116,	0,1137,1893,
#Deleted in new
chr1	43363396	43368018	chr1:43363396-43368018	3	-	43363915	43365609	789624	8	741,137,106,57,81,191,60,104,	0,927,1145,1341,1531,1789,2167,4518,
#Deleted in new
chr1	43363397	43368074	chr1:43363397-43368074	1	-	43363915	43365609	789624	7	740,137,106,57,191,60,160,	0,926,1144,1340,1788,2166,4517,
#Deleted in new
chr1	43363397	43367738	chr1:43363397-43367738	1	-	43363915	43365609	789624	8	740,137,106,57,81,191,60,253,	0,926,1144,1340,1530,1788,2166,4088,
#Deleted in new
chr1	43363727	43365268	chr1:43363727-43365268	0	-	43363727	43363727	8553170	6	410,137,29,57,81,83,	0,596,891,1010,1200,1458,
#Deleted in new
chr1	43363755	43368007	chr1:43363755-43368007	0	-	43363755	43363755	789624	8	382,137,33,57,81,191,60,93,	0,568,859,982,1172,1430,1808,4159,
#Deleted in new
chr1	43363770	43368025	chr1:43363770-43368025	0	-	43363770	43363770	8553170	6	367,57,81,191,60,111,	0,967,1157,1415,1793,4144,
#Deleted in new
chr1	43363835	43367999	chr1:43363835-43367999	0	-	43363835	43363835	8553170	7	302,137,106,57,81,60,85,	0,488,706,902,1092,1728,4079,
#Deleted in new
chr1	43363874	43366587	chr1:43363874-43366587	0	-	43363874	43363874	8553170	8	263,137,106,57,81,191,60,320,	0,449,667,863,1053,1311,1689,2393,
#Deleted in new
chr1	43363993	43367104	chr1:43363993-43367104	0	-	43363993	43363993	8553170	8	144,137,106,57,81,191,60,54,	0,330,548,744,934,1192,1570,3057,
#Deleted in new
chr1	43364014	43367416	chr1:43364014-43367416	0	-	43364014	43364014	8553170	9	123,137,106,57,81,191,60,149,80,	0,309,527,723,913,1171,1549,2253,3322,
#Deleted in new
chr1	43364049	43367738	chr1:43364049-43367738	0	-	43364049	43364049	8553170	8	88,137,106,57,81,191,60,253,	0,274,492,688,878,1136,1514,3436,
#Deleted in new
chr1	43364346	43365214	chr1:43364346-43365214	0	-	43364346	43364346	8553170	4	114,106,57,287,	0,195,391,581,
#Deleted in new
chr1	43364541	43366329	chr1:43364541-43366329	0	-	43364541	43364541	8553170	6	106,57,170,191,60,62,	0,196,386,644,1022,1726,
#Deleted in new
chr1	43364543	43368003	chr1:43364543-43368003	0	-	43364543	43364543	8553170	7	104,57,81,191,60,144,89,	0,194,384,642,1020,1724,3371,
#Deleted in new
chr1	43364559	43367616	chr1:43364559-43367616	0	-	43364559	43364559	8553170	5	88,57,81,60,131,	0,178,368,1004,2926,
#Deleted in new
chr1	43364575	43367965	chr1:43364575-43367965	0	-	43364575	43364575	8553170	4	219,449,60,51,	0,352,988,3339,
#Deleted in new
chr1	43364647	43364715	chr1:43364647-43364715	3	-	43364647	43364647	5263520	1	68,	0,
#Partially deleted in new
chr1	43383916	43389808	chr1:43383916-43389808	1	-	43384449	43389764	789624	8	636,61,249,82,141,145,119,50,	0,1129,2061,2672,2941,3586,4393,5842,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	43383968	43389808	chr1:43383968-43389808	3	-	43385041	43389764	789624	7	1138,249,82,141,145,119,50,	0,2009,2620,2889,3534,4341,5790,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	43384725	43389784	chr1:43384725-43389784	1	-	43385041	43387505	789624	7	381,249,82,141,127,180,26,	0,1252,1863,2132,2777,3584,5033,
#Deleted in new
chr1	43385112	43389155	chr1:43385112-43389155	3	+	43385112	43385112	8553170	4	29,96,156,450,	0,171,2396,3593,
#Deleted in new
chr1	43385672	43386931	chr1:43385672-43386931	0	-	43385672	43385672	8553170	3	554,82,74,	0,916,1185,
#Deleted in new
chr1	43385977	43387647	chr1:43385977-43387647	0	-	43385977	43385977	8553170	3	693,141,145,	0,880,1525,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	43389881	43406894	chr1:43389881-43406894	1	+	43389968	43406327	789624	5	114,126,168,171,612,	0,13295,13725,14498,16401,
#Partially deleted in new
chr1	43389894	43451152	chr1:43389894-43451152	1	+	43389968	43450480	789624	72	101,126,174,171,132,142,107,211,171,235,130,143,153,115,218,216,79,95,169,115,114,171,95,124,165,205,116,247,142,93,79,294,142,108,64,186,168,88,72,202,100,130,153,103,106,112,119,165,85,165,168,134,167,98,133,131,101,177,268,80,126,200,91,81,75,214,154,123,406,117,69,816,	0,13282,13706,14485,25187,26065,26640,29839,30258,30854,31279,32188,32585,32874,33204,34322,34889,35218,35579,35940,36143,36473,36820,37161,37386,37635,38108,38345,39808,40116,40416,40601,41054,41370,41565,41821,42377,42622,42833,43094,44491,45305,47276,47511,47700,47896,48804,49034,49463,49710,49986,50558,51319,51609,51791,52105,52373,52547,52924,53293,53457,53702,55999,56284,56447,57060,57650,57954,58184,58717,60208,60442,
#Partially deleted in new
chr1	43389895	43454247	chr1:43389895-43454247	3	+	43389968	43450480	789624	71	100,126,174,171,132,142,107,211,171,235,130,143,153,115,218,216,79,95,169,115,114,95,124,165,205,116,247,142,93,79,294,142,108,64,186,168,88,72,202,100,130,153,103,106,112,119,165,85,165,168,134,167,98,133,131,101,177,268,80,126,200,91,81,75,214,154,123,406,117,69,3911,	0,13281,13705,14484,25186,26064,26639,29838,30257,30853,31278,32187,32584,32873,33203,34321,34888,35217,35578,35939,36142,36819,37160,37385,37634,38107,38344,39807,40115,40415,40600,41053,41369,41564,41820,42376,42621,42832,43093,44490,45304,47275,47510,47699,47895,48803,49033,49462,49709,49985,50557,51318,51608,51790,52104,52372,52546,52923,53292,53456,53701,55998,56283,56446,57059,57649,57953,58183,58716,60207,60441,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	43389898	43412791	chr1:43389898-43412791	0	+	43389968	43409501	789624	6	97,126,174,171,829,801,	0,13278,13702,14481,19594,22092,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	43389898	43405951	chr1:43389898-43405951	0	+	43389898	43389898	8553170	3	97,126,2351,	0,13278,13702,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	43389950	43410577	chr1:43389950-43410577	0	+	43389950	43389950	8553170	5	45,126,174,171,1085,	0,13226,13650,14429,19542,
#Partially deleted in new
chr1	43404403	43422104	chr1:43404403-43422104	0	+	43404403	43420769	789624	9	147,132,142,107,228,171,235,130,22,	0,10678,11556,12131,15330,15749,16345,16770,17679,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	43420756	43429489	chr1:43420756-43429489	0	+	43420756	43426457	789624	18	227,130,143,153,115,218,216,79,95,169,115,114,101,95,124,165,589,1250,	0,417,1326,1723,2012,2342,3460,4027,4356,4717,5078,5281,5681,5958,6299,6524,6773,7483,
#Deleted in new
chr1	43429841	43430697	chr1:43429841-43430697	0	+	43429841	43429841	8553170	3	262,79,202,	0,469,654,
#Boundary problem: need 40, got 0, diff 40, mapped 0.0
chr1	43431034	43451157	chr1:43431034-43451157	0	+	43431034	43431034	8553170	40	56,108,64,186,119,168,88,72,1497,130,153,103,106,112,119,165,85,165,168,134,167,98,133,131,101,177,268,80,126,200,91,81,75,214,154,123,406,117,69,821,	0,230,425,681,1027,1237,1482,1693,1954,4165,6136,6371,6560,6756,7664,7894,8323,8570,8846,9418,10179,10469,10651,10965,11233,11407,11784,12153,12317,12562,14859,15144,15307,15920,16510,16814,17044,17577,19068,19302,
#Deleted in new
chr1	43431130	43431769	chr1:43431130-43431769	0	+	43431130	43431130	8553170	3	242,64,54,	0,329,585,
#Partially deleted in new
chr1	43432156	43450727	chr1:43432156-43450727	0	+	43432156	43432156	8553170	37	24,168,88,72,202,100,130,153,103,106,112,119,165,85,165,168,134,167,98,133,131,101,177,268,80,126,200,91,81,75,214,154,123,406,117,69,391,	0,115,360,571,832,2229,3043,5014,5249,5438,5634,6542,6772,7201,7448,7724,8296,9057,9347,9529,9843,10111,10285,10662,11031,11195,11440,13737,14022,14185,14798,15388,15692,15922,16455,17946,18180,
#Deleted in new
chr1	43432476	43433095	chr1:43432476-43433095	0	+	43432476	43432476	8553170	3	128,72,107,	0,251,512,
#Deleted in new
chr1	43435707	43437911	chr1:43435707-43437911	0	+	43435707	43435707	8553170	1	2204,	0,
#Deleted in new
chr1	43437505	43438149	chr1:43437505-43438149	0	+	43437505	43437505	8553170	3	3,106,359,	0,89,285,
#Deleted in new
chr1	43438022	43439638	chr1:43438022-43439638	0	+	43438022	43438022	8553170	5	171,119,165,85,34,	0,676,906,1335,1582,
#Partially deleted in new
chr1	43443617	43451081	chr1:43443617-43451081	0	+	43443617	43443617	8553170	8	179,91,990,154,123,406,1560,745,	0,2276,2561,3927,4231,4461,4994,6719,
#Deleted in new
chr1	43445251	43452650	chr1:43445251-43452650	0	+	43445251	43445251	8553170	10	733,81,75,214,154,123,406,117,69,2314,	0,927,1090,1703,2293,2597,2827,3360,4851,5085,
#Deleted in new
chr1	43445636	43450908	chr1:43445636-43450908	0	+	43445636	43445636	8553170	9	348,81,75,214,154,636,117,69,572,	0,542,705,1318,1908,2212,2975,4466,4700,
#Deleted in new
chr1	43447775	43448644	chr1:43447775-43448644	3	-	43447775	43447775	789624	2	157,542,	0,327,
#Deleted in new
chr1	43448538	43448611	chr1:43448538-43448611	3	+	43448538	43448538	5263520	1	73,	0,
#Deleted in new
chr1	43451002	43453989	chr1:43451002-43453989	3	-	43451237	43453793	789624	8	309,135,70,50,79,115,112,395,	0,407,645,795,932,1202,2383,2592,
#Deleted in new
chr1	43451002	43453989	chr1:43451002-43453989	1	-	43451309	43453793	789624	9	309,117,70,50,79,115,102,85,395,	0,425,645,795,932,1202,1900,2410,2592,
#Deleted in new
chr1	43451152	43451740	chr1:43451152-43451740	0	-	43451152	43451152	8553170	2	392,93,	0,495,
#Deleted in new
chr1	43451153	43453716	chr1:43451153-43453716	0	-	43451309	43453716	789624	8	158,117,70,50,79,115,85,122,	0,274,494,644,781,1051,2259,2441,
#Deleted in new
chr1	43451153	43453825	chr1:43451153-43453825	1	-	43451237	43453793	789624	9	158,135,70,50,79,115,102,85,231,	0,256,494,644,781,1051,1749,2259,2441,
#Deleted in new
chr1	43451157	43453675	chr1:43451157-43453675	0	-	43451237	43453675	789624	8	154,135,70,50,79,115,112,81,	0,252,490,640,777,1047,2228,2437,
#Deleted in new
chr1	43451157	43453963	chr1:43451157-43453963	1	-	43451309	43453793	789624	8	154,117,70,50,79,115,112,369,	0,270,490,640,777,1047,2228,2437,
#Deleted in new
chr1	43451157	43453452	chr1:43451157-43453452	0	-	43451237	43453452	789624	7	154,135,70,20,79,115,67,	0,252,490,670,777,1047,2228,
#Deleted in new
chr1	43451157	43453467	chr1:43451157-43453467	0	-	43451309	43453467	789624	7	154,117,70,20,79,115,82,	0,270,490,670,777,1047,2228,
#Deleted in new
chr1	43451159	43453909	chr1:43451159-43453909	0	-	43451159	43451159	8553170	6	152,117,70,50,79,1705,	0,268,488,638,775,1045,
#Deleted in new
chr1	43451319	43453848	chr1:43451319-43453848	1	-	43451338	43453793	789624	7	225,70,50,79,115,112,254,	0,328,478,615,885,2066,2275,
#Deleted in new
chr1	43451666	43452219	chr1:43451666-43452219	0	-	43451666	43451666	8553170	3	51,50,285,	0,131,268,
#Deleted in new
chr1	43453160	43453808	chr1:43453160-43453808	0	-	43453160	43453160	8553170	2	337,214,	0,434,
#Partially deleted in new
chr1	43453926	43456995	chr1:43453926-43456995	3	+	43453926	43453926	8553170	2	127,418,	0,2651,
#Partially deleted in new
chr1	43525186	43553519	chr1:43525186-43553519	0	+	43525186	43525186	8553170	5	71,100,80,136,28,	0,3470,13011,19844,28305,
#Partially deleted in new
chr1	43528561	43553539	chr1:43528561-43553539	0	+	43528561	43528561	8553170	4	195,80,136,48,	0,9636,16469,24930,
#Partially deleted in new
chr1	43530875	43623666	chr1:43530875-43623666	3	+	43545075	43622003	0	34	215,80,136,146,142,189,111,270,582,137,145,306,194,27,118,579,98,254,94,219,155,116,98,124,176,120,155,286,179,127,126,155,136,1732,	0,7322,14155,22616,22924,38714,47934,57855,60096,60936,61581,66872,67844,71195,72540,72735,74027,74314,74653,75364,75938,78507,82742,86569,86860,87754,88172,88412,88804,89219,89578,89962,90221,91059,
#Partially deleted in new
chr1	43530875	43579285	chr1:43530875-43579285	1	+	43545075	43579285	789624	8	215,80,136,146,142,189,111,110,	0,7322,14155,22616,22924,38714,47934,48300,
#Partially deleted in new
chr1	43530889	43622357	chr1:43530889-43622357	1	+	43545075	43622003	0	33	201,80,136,146,142,189,111,270,582,137,145,306,194,118,579,98,254,94,219,155,116,98,124,176,120,155,286,179,127,126,155,136,423,	0,7308,14141,22602,22910,38700,47920,57841,60082,60922,61567,66858,67830,72526,72721,74013,74300,74639,75350,75924,78493,82728,86555,86846,87740,88158,88398,88790,89205,89564,89948,90207,91045,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	43530902	43580078	chr1:43530902-43580078	0	+	43530902	43530902	8553170	8	188,80,136,146,142,189,18,1269,	0,7295,14128,22589,22897,38687,45007,47907,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	43538197	43580078	chr1:43538197-43580078	0	+	43538197	43538197	8553170	6	80,136,146,142,189,1269,	0,6833,15294,15602,31392,40612,
#Partially deleted in new
chr1	43545075	43579284	chr1:43545075-43579284	0	+	43545075	43579284	789624	6	91,146,142,189,111,109,	0,8416,8724,24514,33734,34100,
#Partially deleted in new
chr1	43582479	43591118	chr1:43582479-43591118	0	+	43582479	43582479	8553170	4	142,12,270,147,	0,602,6251,8492,
#Partially deleted in new
chr1	43591020	43622283	chr1:43591020-43622283	0	+	43591020	43622003	789624	25	533,137,145,194,27,118,98,254,94,219,155,116,33,98,124,176,120,155,286,179,127,126,155,136,349,	0,791,1436,7699,11050,12395,13882,14169,14508,15219,15793,18362,21747,22597,26424,26715,27609,28027,28267,28659,29074,29433,29817,30076,30914,
#Partially deleted in new
chr1	43591052	43623654	chr1:43591052-43623654	0	+	43591052	43622003	789624	25	501,137,145,306,194,112,579,98,254,94,219,155,116,98,124,176,120,155,286,179,127,126,155,136,1720,	0,759,1404,6695,7667,12363,12558,13850,14137,14476,15187,15761,18330,22565,26392,26683,27577,27995,28235,28627,29042,29401,29785,30044,30882,
#Partially deleted in new
chr1	43591449	43622842	chr1:43591449-43622842	0	+	43591449	43622003	789624	25	104,137,145,194,118,579,98,254,94,219,155,116,33,98,124,176,120,155,286,179,127,126,155,136,908,	0,362,1007,7270,11966,12161,13453,13740,14079,14790,15364,17933,21318,22168,25995,26286,27180,27598,27838,28230,28645,29004,29388,29647,30485,
#Partially deleted in new
chr1	43598073	43623666	chr1:43598073-43623666	0	+	43598073	43598073	8553170	21	840,118,579,98,254,94,219,155,116,98,124,176,120,155,286,179,127,126,155,136,1732,	0,5342,5537,6829,7116,7455,8166,8740,11309,15544,19371,19662,20556,20974,21214,21606,22021,22380,22764,23023,23861,
#Partially deleted in new
chr1	43598838	43623663	chr1:43598838-43623663	0	+	43598838	43622003	789624	22	75,27,118,98,254,94,219,155,116,33,98,124,176,120,155,286,179,127,126,155,136,1729,	0,3232,4577,6064,6351,6690,7401,7975,10544,13929,14779,18606,18897,19791,20209,20449,20841,21256,21615,21999,22258,23096,
#Deleted in new
chr1	43605581	43606868	chr1:43605581-43606868	0	+	43605581	43605581	8553170	3	41,219,38,	0,658,1249,
#Partially deleted in new
chr1	43613139	43622863	chr1:43613139-43622863	0	+	43613139	43613139	8553170	11	576,124,176,120,155,286,179,485,155,136,929,	0,4305,4596,5490,5908,6148,6540,6955,7698,7957,8795,
#Partially deleted in new
chr1	43650148	43931014	chr1:43650148-43931014	3	+	43653175	43683711	789624	26	104,177,176,115,194,121,182,205,77,56,109,186,171,120,93,148,48,43,93,95,64,96,187,147,147,883,	0,2988,5442,10149,12745,33535,38765,40696,41347,42107,43845,44560,47694,53468,53871,86084,141953,164742,188070,244234,248086,249019,249392,270255,270633,279983,
#Partially deleted in new
chr1	43650157	43705515	chr1:43650157-43705515	3	+	43653175	43704370	0	22	95,177,176,115,194,50,104,138,248,200,371,121,182,205,77,56,109,186,171,120,93,1286,	0,2979,5433,10140,12736,15538,16294,16796,17614,18942,21347,33526,38756,40687,41338,42098,43836,44551,47685,53459,53862,54072,
#Partially deleted in new
chr1	43650535	43667021	chr1:43650535-43667021	0	+	43653175	43667021	789624	8	139,177,176,115,194,50,104,68,	0,2601,5055,9762,12358,15160,15916,16418,
#Partially deleted in new
chr1	43653305	43667021	chr1:43653305-43667021	0	+	43653305	43653680	789624	8	8,137,176,115,194,50,104,68,	0,357,2285,6992,9588,12390,13146,13648,
#Partially deleted in new
chr1	43666284	43667062	chr1:43666284-43667062	0	+	43666284	43666284	8553170	2	271,109,	0,669,
#Deleted in new
chr1	43690589	43692278	chr1:43690589-43692278	0	+	43690589	43690589	8553170	3	460,77,23,	0,906,1666,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	43699764	43708138	chr1:43699764-43708138	0	-	43699764	43699764	8553170	5	299,73,84,105,31,	0,2891,3799,4588,8343,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	43699922	43707341	chr1:43699922-43707341	3	-	43699922	43699922	789624	5	141,73,84,105,283,	0,2733,3641,4430,7136,
#Partially deleted in new
chr1	43702096	43704469	chr1:43702096-43704469	1	-	43702096	43702096	8553170	3	632,84,117,	0,1467,2256,
#Deleted in new
chr1	43703394	43704746	chr1:43703394-43704746	1	-	43703394	43703394	8553170	2	253,394,	0,958,
#Deleted in new
chr1	43704313	43707330	chr1:43704313-43707330	0	-	43704313	43704313	8553170	2	144,272,	0,2745,
#Partially deleted in new
chr1	43705823	43838249	chr1:43705823-43838249	0	+	43736262	43801373	789624	6	173,148,48,260,43,31,	0,30409,86278,95458,109067,132395,
#Partially deleted in new
chr1	43705823	43894420	chr1:43705823-43894420	0	+	43736262	43801373	789624	8	173,148,48,264,43,93,174,38,	0,30409,86278,95458,109067,132395,152311,188559,
#Partially deleted in new
chr1	43707496	43931165	chr1:43707496-43931165	3	+	43736262	43930221	789624	12	197,148,48,43,93,95,64,96,187,147,147,1034,	0,28736,84605,107394,130722,186886,190738,191671,192044,212907,213285,222635,
#Partially deleted in new
chr1	43707523	43931141	chr1:43707523-43931141	0	+	43736262	43899262	789624	9	170,148,43,93,95,64,197,187,1010,	0,28709,107367,130695,186859,190711,191543,192017,222608,
#Partially deleted in new
chr1	43707523	43894416	chr1:43707523-43894416	0	+	43736262	43814937	789624	5	170,148,114,93,34,	0,28709,107367,130695,186859,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	43707526	43930891	chr1:43707526-43930891	1	+	43736262	43930221	789624	12	167,148,43,162,93,95,64,96,187,147,147,760,	0,28706,107364,117204,130692,186856,190708,191641,192014,212877,213255,222605,
#Partially deleted in new
chr1	43707532	43931165	chr1:43707532-43931165	1	+	43736262	43930183	789624	5	161,148,43,93,1034,	0,28700,107358,130686,222599,
#Partially deleted in new
chr1	43707532	43931165	chr1:43707532-43931165	1	+	43736262	43899267	789624	8	161,193,43,93,95,64,122,1034,	0,28700,107358,130686,186850,190702,191635,222599,
#Partially deleted in new
chr1	43707532	43931162	chr1:43707532-43931162	1	+	43736262	43930221	789624	11	161,148,43,93,95,64,96,187,147,147,1031,	0,28700,107358,130686,186850,190702,191635,192008,212871,213249,222599,
#Partially deleted in new
chr1	43707532	43931165	chr1:43707532-43931165	1	+	43736262	43930202	789624	7	161,193,48,43,93,95,1034,	0,28700,84569,107358,130686,186850,222599,
#Partially deleted in new
chr1	43707535	43931122	chr1:43707535-43931122	1	+	43736262	43930221	789624	11	158,148,48,43,95,64,96,187,147,147,991,	0,28697,84566,107355,186847,190699,191632,192005,212868,213246,222596,
#Partially deleted in new
chr1	43707535	43931151	chr1:43707535-43931151	1	+	43736262	43930202	789624	13	158,193,48,43,93,95,64,96,187,147,147,196,1020,	0,28697,84566,107355,130683,186847,190699,191632,192005,212868,213246,213907,222596,
#Partially deleted in new
chr1	43707535	43931131	chr1:43707535-43931131	1	+	43736262	43930202	789624	13	158,148,48,43,93,95,64,96,187,147,147,196,1000,	0,28697,84566,107355,130683,186847,190699,191632,192005,212868,213246,213907,222596,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	43707535	43931140	chr1:43707535-43931140	1	+	43736262	43930221	789624	11	158,148,48,43,162,93,95,64,96,187,1009,	0,28697,84566,107355,117195,130683,186847,190699,191632,192005,222596,
#Partially deleted in new
chr1	43707537	43931159	chr1:43707537-43931159	1	+	43736262	43930221	789624	12	156,193,48,43,93,95,64,96,187,147,147,1028,	0,28695,84564,107353,130681,186845,190697,191630,192003,212866,213244,222594,
#Partially deleted in new
chr1	43707539	43930221	chr1:43707539-43930221	0	+	43736262	43879380	789624	11	154,148,48,43,93,173,95,64,96,187,90,	0,28693,84562,107351,130679,171795,186843,190695,191628,192001,222592,
#Partially deleted in new
chr1	43707540	43931146	chr1:43707540-43931146	1	+	43736262	43930221	789624	10	153,148,48,43,93,95,64,96,187,1015,	0,28692,84561,107350,130678,186842,190694,191627,192000,222591,
#Partially deleted in new
chr1	43707542	43931139	chr1:43707542-43931139	1	+	43736262	43930221	789624	9	151,148,43,93,95,64,96,187,1008,	0,28690,107348,130676,186840,190692,191625,191998,222589,
#Partially deleted in new
chr1	43707542	43931077	chr1:43707542-43931077	0	+	43736262	43899521	789624	12	151,193,48,43,93,95,64,96,219,147,147,946,	0,28690,84559,107348,130676,186840,190692,191625,191966,212861,213239,222589,
#Partially deleted in new
chr1	43707542	43931144	chr1:43707542-43931144	0	+	43736262	43858198	789624	14	151,148,48,43,93,174,95,64,96,187,147,147,196,1013,	0,28690,84559,107348,130676,150592,186840,190692,191625,191998,212861,213239,213900,222589,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	43707543	43931139	chr1:43707543-43931139	1	+	43736262	43930221	789624	13	150,148,48,43,162,93,95,64,96,187,147,147,1008,	0,28689,84558,107347,117187,130675,186839,190691,191624,191997,212860,213238,222588,
#Partially deleted in new
chr1	43707544	43930221	chr1:43707544-43930221	0	+	43736262	43858198	789624	10	149,148,48,43,93,174,95,64,96,90,	0,28688,84557,107346,130674,150590,186838,190690,191623,222587,
#Partially deleted in new
chr1	43707544	43931160	chr1:43707544-43931160	0	+	43736262	43899521	789624	12	149,148,48,43,93,95,64,96,219,147,147,1029,	0,28688,84557,107346,130674,186838,190690,191623,191964,212859,213237,222587,
#Partially deleted in new
chr1	43707546	43920217	chr1:43707546-43920217	0	+	43736262	43879045	789624	13	147,148,48,43,93,205,173,95,64,96,187,85,286,	0,28686,84555,107344,130672,171480,171788,186836,190688,191621,191994,193202,212385,
#Partially deleted in new
chr1	43707546	43931146	chr1:43707546-43931146	0	+	43736262	43899521	789624	13	147,148,48,43,93,95,64,96,219,147,147,196,1015,	0,28686,84555,107344,130672,186836,190688,191621,191962,212857,213235,213896,222585,
#Partially deleted in new
chr1	43707546	43931129	chr1:43707546-43931129	0	+	43736262	43899242	789624	11	147,148,43,93,64,96,187,147,147,196,998,	0,28686,107344,130672,190688,191621,191994,212857,213235,213896,222585,
#Partially deleted in new
chr1	43707548	43931122	chr1:43707548-43931122	0	+	43736262	43920812	789624	11	145,148,43,93,95,64,96,187,170,147,991,	0,28684,107342,130670,186834,190686,191619,191992,212832,213233,222583,
#Partially deleted in new
chr1	43707550	43931139	chr1:43707550-43931139	0	+	43736262	43920834	789624	11	143,148,48,43,95,64,96,187,147,127,1008,	0,28682,84551,107340,186832,190684,191617,191990,212853,213251,222581,
#Partially deleted in new
chr1	43707552	43930847	chr1:43707552-43930847	0	+	43736262	43879380	789624	13	141,148,48,43,93,173,95,64,96,187,147,147,716,	0,28680,84549,107338,130666,171782,186830,190682,191615,191988,212851,213229,222579,
#Partially deleted in new
chr1	43707554	43931151	chr1:43707554-43931151	1	+	43736262	43930202	789624	13	139,148,48,43,93,95,64,96,187,147,147,127,1020,	0,28678,84547,107336,130664,186828,190680,191613,191986,212849,213227,213957,222577,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	43707555	43931130	chr1:43707555-43931130	1	+	43736262	43930221	789624	13	138,193,48,43,162,93,95,64,96,187,147,147,999,	0,28677,84546,107335,117175,130663,186827,190679,191612,191985,212848,213226,222576,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	43707565	43739322	chr1:43707565-43739322	0	+	43707565	43707565	8553170	2	128,3090,	0,28667,
#Partially deleted in new
chr1	43707565	43931122	chr1:43707565-43931122	0	+	43736262	43898243	789624	12	128,148,48,43,93,95,87,96,187,147,147,991,	0,28667,84536,107325,130653,186817,190646,191602,191975,212838,213216,222566,
#Partially deleted in new
chr1	43707571	43931009	chr1:43707571-43931009	0	+	43736262	43899521	789624	11	122,148,48,43,95,64,96,219,147,147,878,	0,28661,84530,107319,186811,190663,191596,191937,212832,213210,222560,
#Partially deleted in new
chr1	43707625	43930313	chr1:43707625-43930313	0	+	43736262	43858198	789624	6	68,148,43,93,174,182,	0,28607,107265,130593,150509,222506,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	43707639	43772734	chr1:43707639-43772734	1	+	43736262	43772074	789624	3	54,148,851,	0,28593,64244,
#Partially deleted in new
chr1	43707642	43838311	chr1:43707642-43838311	0	+	43736262	43801373	789624	6	51,193,48,264,43,93,	0,28590,84459,93639,107248,130576,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	43707647	43922584	chr1:43707647-43922584	1	+	43736262	43921766	789624	12	46,148,48,43,93,95,64,96,187,147,147,1142,	0,28585,84454,107243,130571,186735,190587,191520,191893,212756,213134,213795,
#Partially deleted in new
chr1	43707684	43931141	chr1:43707684-43931141	0	+	43736262	43858198	789624	13	9,148,48,43,93,174,95,64,96,187,147,147,1010,	0,28548,84417,107206,130534,150450,186698,190550,191483,191856,212719,213097,222447,
#Partially deleted in new
chr1	43707689	43931151	chr1:43707689-43931151	0	+	43736262	43879380	789624	12	4,148,43,93,173,95,64,96,187,147,147,1020,	0,28543,107201,130529,171645,186693,190545,191478,191851,212714,213092,222442,
#Partially deleted in new
chr1	43707840	43931129	chr1:43707840-43931129	1	+	43736262	43930221	789624	12	246,148,48,43,93,95,64,96,187,147,147,998,	0,28392,84261,107050,130378,186542,190394,191327,191700,212563,212941,222291,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	43709391	43727343	chr1:43709391-43727343	3	-	43709391	43709391	789624	4	144,133,81,111,	0,9602,11079,17841,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	43716466	43716556	chr1:43716466-43716556	3	+	43716466	43716466	8553170	1	90,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	43736232	43931122	chr1:43736232-43931122	1	+	43736262	43930221	789624	11	148,48,43,162,93,95,64,96,187,147,991,	0,55869,78658,88498,101986,158150,162002,162935,163308,184171,193899,
#Partially deleted in new
chr1	43736232	43931127	chr1:43736232-43931127	0	+	43736262	43920462	789624	8	193,48,43,93,95,147,147,996,	0,55869,78658,101986,158150,184171,184549,193899,
#Partially deleted in new
chr1	43736236	43931140	chr1:43736236-43931140	1	+	43736262	43930202	789624	11	144,43,93,95,64,96,187,147,147,196,1009,	0,78654,101982,158146,161998,162931,163304,184167,184545,185206,193895,
#Partially deleted in new
chr1	43736262	43930709	chr1:43736262-43930709	1	+	43736262	43930202	789624	6	163,48,43,93,95,578,	0,55839,78628,101956,158120,193869,
#Partially deleted in new
chr1	43736262	43930202	chr1:43736262-43930202	1	+	43736262	43930202	789624	6	118,48,43,93,95,71,	0,55839,78628,101956,158120,193869,
#Partially deleted in new
chr1	43736262	43930221	chr1:43736262-43930221	1	+	43736262	43899267	789624	8	118,48,43,93,95,64,122,90,	0,55839,78628,101956,158120,161972,162905,193869,
#Partially deleted in new
chr1	43736262	43930972	chr1:43736262-43930972	1	+	43736262	43899267	789624	7	163,43,93,95,64,122,841,	0,78628,101956,158120,161972,162905,193869,
#Partially deleted in new
chr1	43736262	43930221	chr1:43736262-43930221	1	+	43736262	43930183	789624	7	163,43,93,95,64,96,90,	0,78628,101956,158120,161972,162905,193869,
#Partially deleted in new
chr1	43736262	43930221	chr1:43736262-43930221	1	+	43736262	43930221	789624	11	118,48,43,93,95,64,96,187,57,147,90,	0,55839,78628,101956,158120,161972,162905,163278,184231,184519,193869,
#Partially deleted in new
chr1	43736262	43930522	chr1:43736262-43930522	0	+	43736262	43898243	789624	8	118,95,64,96,219,147,147,391,	0,158120,161972,162905,163246,184141,184519,193869,
#Partially deleted in new
chr1	43736262	43930221	chr1:43736262-43930221	0	+	43736262	43838232	789624	9	118,93,95,64,96,187,147,147,90,	0,101956,158120,161972,162905,163278,184141,184519,193869,
#Partially deleted in new
chr1	43736262	43930221	chr1:43736262-43930221	1	+	43736262	43930183	789624	7	118,43,93,95,64,96,90,	0,78628,101956,158120,161972,162905,193869,
#Partially deleted in new
chr1	43736262	43930221	chr1:43736262-43930221	0	+	43736262	43920812	789624	9	118,43,93,95,64,96,147,147,90,	0,78628,101956,158120,161972,162905,184141,184519,193869,
#Partially deleted in new
chr1	43736262	43930202	chr1:43736262-43930202	1	+	43736262	43930202	789624	5	118,43,93,95,71,	0,78628,101956,158120,193869,
#Partially deleted in new
chr1	43736262	43930221	chr1:43736262-43930221	1	+	43736262	43930183	789624	4	118,43,93,90,	0,78628,101956,193869,
#Partially deleted in new
chr1	43736262	43930221	chr1:43736262-43930221	1	+	43736262	43930221	789624	7	118,43,95,64,96,187,90,	0,78628,158120,161972,162905,163278,193869,
#Partially deleted in new
chr1	43736262	43930221	chr1:43736262-43930221	0	+	43736262	43920462	789624	8	118,48,43,93,95,147,147,90,	0,55839,78628,101956,158120,184141,184519,193869,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	43736262	43842785	chr1:43736262-43842785	0	+	43736262	43736262	8553170	4	118,48,43,4567,	0,55839,78628,101956,
#Partially deleted in new
chr1	43736278	43930760	chr1:43736278-43930760	0	+	43736278	43899267	789624	7	102,43,93,95,64,122,629,	0,78612,101940,158104,161956,162889,193853,
#Partially deleted in new
chr1	43736319	43931141	chr1:43736319-43931141	0	+	43736319	43930221	789624	10	61,48,43,93,95,64,96,187,147,1010,	0,55782,78571,101899,158063,161915,162848,163221,184084,193812,
#Partially deleted in new
chr1	43736335	43930988	chr1:43736335-43930988	0	+	43736335	43930221	789624	9	45,43,95,64,96,187,147,147,857,	0,78555,158047,161899,162832,163205,184068,184446,193796,
#Partially deleted in new
chr1	43736340	43931139	chr1:43736340-43931139	0	+	43736340	43930221	789624	9	85,48,43,93,95,64,96,187,1008,	0,55761,78550,101878,158042,161894,162827,163200,193791,
#Partially deleted in new
chr1	43736368	43931092	chr1:43736368-43931092	0	+	43736368	43930221	789624	11	12,48,43,93,95,64,96,187,147,159,961,	0,55733,78522,101850,158014,161866,162799,163172,184035,184413,193763,
#Partially deleted in new
chr1	43743470	43743741	chr1:43743470-43743741	7	+	43743470	43743470	16724991	1	271,	0,
#Partially deleted in new
chr1	43792101	43931127	chr1:43792101-43931127	0	+	43792101	43930183	789624	7	48,43,93,95,64,96,996,	0,22789,46117,102281,106133,107066,138030,
#Partially deleted in new
chr1	43792106	43920550	chr1:43792106-43920550	0	+	43792106	43792106	8553170	9	43,43,93,95,64,96,187,85,147,	0,22784,46112,102276,106128,107061,107434,108642,128297,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	43799629	43801692	chr1:43799629-43801692	0	+	43799629	43799629	8553170	2	81,411,	0,1652,
#Partially deleted in new
chr1	43814926	43930953	chr1:43814926-43930953	0	+	43814926	43899267	789624	9	7,93,95,64,122,187,147,147,822,	0,23292,79456,83308,84241,84614,105477,105855,115205,
#Partially deleted in new
chr1	43838249	43931139	chr1:43838249-43931139	0	+	43838249	43899267	789624	6	62,95,64,122,187,1008,	0,56133,59985,60918,61291,91882,
#Deleted in new
chr1	43838621	43838683	chr1:43838621-43838683	3	+	43838621	43838621	5263520	1	62,	0,
#Deleted in new
chr1	43850299	43851611	chr1:43850299-43851611	7	-	43850299	43850299	16724991	1	1312,	0,
#Partially deleted in new
chr1	43879243	43930838	chr1:43879243-43930838	0	+	43879243	43879243	8553170	8	264,95,64,96,187,147,147,707,	0,15139,18991,19924,20297,41160,41538,50888,
#Partially deleted in new
chr1	43894142	43931131	chr1:43894142-43931131	0	+	43894142	43894142	8553170	7	335,64,96,219,147,147,1000,	0,4092,5025,5366,26261,26639,35989,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	43894187	43914621	chr1:43894187-43914621	0	+	43894187	43894187	8553170	5	290,64,96,219,2747,	0,4047,4980,5321,17687,
#Partially deleted in new
chr1	43894236	43930765	chr1:43894236-43930765	0	+	43894236	43894236	8553170	5	241,64,96,187,634,	0,3998,4931,5304,35895,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	43894384	43914639	chr1:43894384-43914639	0	+	43894384	43911875	789624	6	93,64,96,187,77,2765,	0,3850,4783,5156,16782,17490,
#Partially deleted in new
chr1	43898237	43920485	chr1:43898237-43920485	0	+	43898237	43898302	789624	4	201,96,187,82,	0,930,1303,22166,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	43899224	43917029	chr1:43899224-43917029	0	+	43899224	43900793	789624	4	39,187,85,422,	0,316,1524,17383,
#Partially deleted in new
chr1	43899335	43930282	chr1:43899335-43930282	0	+	43899335	43899335	8553170	4	392,147,147,151,	0,21068,21446,30796,
#Partially deleted in new
chr1	43899587	43930176	chr1:43899587-43930176	0	+	43899587	43930176	789624	4	140,147,147,158,	0,20816,21194,30431,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	43919101	43931057	chr1:43919101-43931057	0	+	43919101	43919101	8553170	4	1449,147,196,926,	0,1680,2341,11030,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	43919112	43931139	chr1:43919112-43931139	0	+	43919112	43919112	8553170	3	1438,147,1008,	0,1669,11019,
#Partially deleted in new
chr1	43933319	43937241	chr1:43933319-43937241	1	+	43935656	43936765	0	5	566,149,127,139,940,	0,792,2270,2773,2982,
#Partially deleted in new
chr1	43933319	43937239	chr1:43933319-43937239	3	+	43935656	43936765	0	5	566,149,127,163,938,	0,792,2270,2749,2982,
#Partially deleted in new
chr1	43933674	43936231	chr1:43933674-43936231	0	+	43935656	43936231	789624	3	211,127,139,	0,1915,2418,
#Partially deleted in new
chr1	43933718	43936231	chr1:43933718-43936231	0	+	43935656	43936231	789624	4	167,149,62,139,	0,393,1936,2374,
#Partially deleted in new
chr1	43933811	43937240	chr1:43933811-43937240	1	+	43935656	43936765	0	4	74,127,163,939,	0,1778,2257,2490,
#Partially deleted in new
chr1	43933845	43936346	chr1:43933845-43936346	0	+	43935656	43936346	789624	5	40,149,127,163,45,	0,266,1744,2223,2456,
#Partially deleted in new
chr1	43934194	43936346	chr1:43934194-43936346	1	+	43935656	43936239	789624	3	66,127,278,	0,1395,1874,
#Partially deleted in new
chr1	43934197	43936345	chr1:43934197-43936345	1	+	43935656	43936239	789624	3	63,62,277,	0,1457,1871,
#Partially deleted in new
chr1	43934386	43936346	chr1:43934386-43936346	0	+	43935656	43936346	789624	4	150,127,163,45,	0,1203,1682,1915,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	43935358	43936807	chr1:43935358-43936807	1	+	43935656	43936765	0	3	358,139,506,	0,734,943,
#Deleted in new
chr1	43935806	43936765	chr1:43935806-43936765	1	+	43935981	43936765	0	2	425,464,	0,495,
#Partially deleted in new
chr1	43944369	43946302	chr1:43944369-43946302	0	-	43944369	43944369	8553170	2	427,59,	0,1874,
#Partially deleted in new
chr1	43944371	43946286	chr1:43944371-43946286	1	-	43944371	43944371	8553170	3	103,148,43,	0,277,1872,
#Partially deleted in new
chr1	43944373	43946551	chr1:43944373-43946551	3	-	43944373	43944373	8553170	2	423,71,	0,2107,
#Partially deleted in new
chr1	43946938	43968022	chr1:43946938-43968022	3	+	43947600	43967682	0	20	746,737,141,142,167,121,148,182,27,135,144,81,138,97,53,67,59,90,182,437,	0,2478,9381,9621,9871,10256,10463,11038,11303,11522,11807,13310,13937,14227,17330,19636,19785,19991,20376,20647,
#Deleted in new
chr1	43947554	43949545	chr1:43947554-43949545	0	+	43947554	43947554	8553170	2	130,174,	0,1817,
#Partially deleted in new
chr1	43947569	43956844	chr1:43947569-43956844	0	+	43947569	43947569	8553170	5	115,68,141,142,35,	0,2516,8750,8990,9240,
#Partially deleted in new
chr1	43953216	43957549	chr1:43953216-43957549	0	+	43953216	43953216	8553170	6	267,141,142,167,121,148,	0,3103,3343,3593,3978,4185,
#Deleted in new
chr1	43957108	43957549	chr1:43957108-43957549	0	+	43957108	43957108	8553170	2	207,148,	0,293,
#Deleted in new
chr1	43965938	43967752	chr1:43965938-43967752	1	+	43966523	43967682	789624	5	703,59,90,182,167,	0,785,991,1376,1647,
#Deleted in new
chr1	43967159	43967663	chr1:43967159-43967663	0	+	43967159	43967159	8553170	2	337,78,	0,426,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	43968350	43974821	chr1:43968350-43974821	3	-	43968350	43968350	8553170	4	1293,267,105,379,	0,1690,5013,6092,
#Deleted in new
chr1	43969999	43971013	chr1:43969999-43971013	0	+	43969999	43969999	8553170	3	323,222,48,	0,596,966,
#Deleted in new
chr1	43969999	43971526	chr1:43969999-43971526	0	+	43970175	43970809	789624	4	271,222,224,140,	0,596,966,1387,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	43970003	43973369	chr1:43970003-43973369	3	+	43970175	43972539	789624	6	319,113,224,684,177,955,	0,592,962,1383,2154,2411,
#Deleted in new
chr1	43970007	43972721	chr1:43970007-43972721	0	+	43970175	43971570	789624	5	315,113,684,177,307,	0,588,1379,2150,2407,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	43970009	43973369	chr1:43970009-43973369	0	+	43970175	43971039	789624	6	261,113,224,684,177,955,	0,586,956,1377,2148,2405,
#Deleted in new
chr1	43970009	43970924	chr1:43970009-43970924	0	+	43970009	43970009	8553170	2	261,329,	0,586,
#Deleted in new
chr1	43970022	43971540	chr1:43970022-43971540	0	+	43970175	43970948	789624	4	300,113,284,154,	0,573,883,1364,
#Deleted in new
chr1	43970022	43971119	chr1:43970022-43971119	0	+	43970022	43970022	8553170	2	300,524,	0,573,
#Deleted in new
chr1	43970023	43971625	chr1:43970023-43971625	0	+	43970023	43970023	8553170	3	299,113,660,	0,572,942,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	43970024	43973340	chr1:43970024-43973340	1	+	43970175	43972539	789624	5	298,113,224,177,926,	0,571,941,2133,2390,
#Deleted in new
chr1	43970028	43971189	chr1:43970028-43971189	0	+	43970028	43970028	8553170	3	242,113,284,	0,567,877,
#Deleted in new
chr1	43970028	43971724	chr1:43970028-43971724	0	+	43970028	43970028	8553170	4	294,113,255,338,	0,567,937,1358,
#Deleted in new
chr1	43970066	43971106	chr1:43970066-43971106	0	+	43970175	43970615	789624	3	248,113,141,	0,529,899,
#Deleted in new
chr1	43970104	43971102	chr1:43970104-43971102	0	+	43970104	43970104	8553170	2	208,507,	0,491,
#Deleted in new
chr1	43970869	43971624	chr1:43970869-43971624	0	+	43970869	43970869	8553170	2	320,238,	0,517,
#Deleted in new
chr1	43971113	43972763	chr1:43971113-43972763	0	+	43971113	43972539	789624	4	76,411,177,349,	0,546,1044,1301,
#Deleted in new
chr1	43971468	43972808	chr1:43971468-43972808	0	+	43971468	43972191	789624	3	72,177,394,	0,689,946,
#Deleted in new
chr1	43974486	43976823	chr1:43974486-43976823	0	+	43976114	43976823	789624	5	128,84,78,70,51,	0,1603,1815,2103,2286,
#Deleted in new
chr1	43974647	43978294	chr1:43974647-43978294	3	+	43975040	43978007	789624	8	460,49,84,78,70,52,191,314,	0,1152,1442,1654,1942,2125,2378,3333,
#Deleted in new
chr1	43974943	43978213	chr1:43974943-43978213	1	+	43975040	43977411	789624	7	164,49,84,78,70,52,1188,	0,856,1146,1358,1646,1829,2082,
#Deleted in new
chr1	43974947	43978289	chr1:43974947-43978289	1	+	43976114	43978007	789624	7	160,84,78,70,52,191,309,	0,1142,1354,1642,1825,2078,3033,
#Deleted in new
chr1	43974950	43978023	chr1:43974950-43978023	1	+	43975040	43978007	789624	7	347,84,78,70,52,191,43,	0,1139,1351,1639,1822,2075,3030,
#Deleted in new
chr1	43974957	43977197	chr1:43974957-43977197	0	+	43974957	43974957	8553170	5	150,84,78,52,172,	0,1132,1344,1815,2068,
#Deleted in new
chr1	43974959	43976625	chr1:43974959-43976625	0	+	43975040	43975738	789624	5	148,184,84,78,36,	0,705,1130,1342,1630,
#Deleted in new
chr1	43974970	43978295	chr1:43974970-43978295	0	+	43974970	43974970	8553170	6	878,84,78,70,52,1270,	0,1119,1331,1619,1802,2055,
#Deleted in new
chr1	43974971	43978292	chr1:43974971-43978292	0	+	43974971	43974971	8553170	7	877,84,78,70,52,191,312,	0,1118,1330,1618,1801,2054,3009,
#Deleted in new
chr1	43974978	43977114	chr1:43974978-43977114	0	+	43974978	43974978	8553170	5	129,49,84,358,342,	0,821,1111,1323,1794,
#Deleted in new
chr1	43975099	43976379	chr1:43975099-43976379	0	+	43975099	43976097	789624	4	208,49,84,78,	0,700,990,1202,
#Deleted in new
chr1	43975836	43976541	chr1:43975836-43976541	0	+	43975836	43975836	8553170	2	337,240,	0,465,
#Deleted in new
chr1	43976054	43978295	chr1:43976054-43978295	1	+	43976114	43978007	789624	6	119,78,70,52,191,315,	0,247,535,718,971,1926,
#Deleted in new
chr1	43978942	43981327	chr1:43978942-43981327	0	+	43978942	43978942	8553170	2	141,219,	0,2166,
#Partially deleted in new
chr1	43979201	43991170	chr1:43979201-43991170	3	+	43981160	43990448	789624	7	310,365,236,191,123,105,873,	0,1907,2487,5663,6076,6315,11096,
#Deleted in new
chr1	43979236	43981923	chr1:43979236-43981923	0	+	43979236	43979236	8553170	3	380,365,235,	0,1872,2452,
#Partially deleted in new
chr1	43979435	43991168	chr1:43979435-43991168	1	+	43981314	43990448	789624	7	76,365,192,191,123,105,871,	0,1673,2297,5429,5842,6081,10862,
#Partially deleted in new
chr1	43979876	43991168	chr1:43979876-43991168	1	+	43981160	43990448	789624	7	738,365,236,191,123,105,871,	0,1232,1812,4988,5401,5640,10421,
#Partially deleted in new
chr1	43979935	43991170	chr1:43979935-43991170	1	+	43980011	43990448	789624	7	111,365,236,191,123,105,873,	0,1173,1753,4929,5342,5581,10362,
#Deleted in new
chr1	43980017	43985399	chr1:43980017-43985399	0	+	43980017	43980017	8553170	5	29,365,236,191,122,	0,1091,1671,4847,5260,
#Deleted in new
chr1	43984864	43986206	chr1:43984864-43986206	0	+	43984864	43984864	8553170	3	191,123,690,	0,413,652,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	43991358	43996524	chr1:43991358-43996524	0	+	43991878	43992317	789624	8	135,158,235,117,1273,70,79,587,	0,488,794,1164,2531,4242,4419,4579,
#Partially deleted in new
chr1	43991499	44016556	chr1:43991499-44016556	1	-	43991608	44010088	789624	12	493,101,100,135,238,104,135,133,271,132,157,163,	0,9267,9456,9664,9890,10813,11012,11353,16853,18465,19226,24894,
#Partially deleted in new
chr1	43991607	43996528	chr1:43991607-43996528	3	+	43991878	43996160	789624	9	139,158,176,117,78,55,70,79,591,	0,239,604,915,2279,3500,3993,4170,4330,
#Partially deleted in new
chr1	43991612	43995158	chr1:43991612-43995158	0	+	43991878	43992317	789624	6	134,158,235,117,78,51,	0,234,540,910,2274,3495,
#Partially deleted in new
chr1	43991647	43996528	chr1:43991647-43996528	0	+	43991878	43993943	789624	6	99,158,75,55,256,587,	0,199,2242,3460,3953,4294,
#Partially deleted in new
chr1	43991665	43996528	chr1:43991665-43996528	0	+	43991665	43991665	8553170	8	81,541,117,125,55,70,79,591,	0,181,857,2174,3442,3935,4112,4272,
#Partially deleted in new
chr1	43991773	43996155	chr1:43991773-43996155	0	+	43991878	43993943	789624	6	231,75,55,70,79,218,	0,2116,3334,3827,4004,4164,
#Partially deleted in new
chr1	43991783	43996279	chr1:43991783-43996279	0	+	43991878	43993943	789624	6	236,78,55,70,79,342,	0,2103,3324,3817,3994,4154,
#Partially deleted in new
chr1	43991801	43995856	chr1:43991801-43995856	0	+	43991801	43991801	8553170	6	586,117,75,55,70,79,	0,721,2088,3306,3799,3976,
#Partially deleted in new
chr1	43991830	44031360	chr1:43991830-44031360	1	-	43991876	44024277	789624	12	162,289,135,238,104,135,133,271,132,157,115,55,	0,8936,9333,9559,10482,10681,11022,16522,18134,18895,32417,39475,
#Partially deleted in new
chr1	43991841	43996110	chr1:43991841-43996110	0	+	43991878	43996110	789624	6	163,161,55,70,79,169,	0,1962,3266,3759,3936,4100,
#Partially deleted in new
chr1	43992221	43996114	chr1:43992221-43996114	0	+	43992221	43992221	8553170	7	49,284,75,55,70,79,177,	0,134,1668,2886,3379,3556,3716,
#Deleted in new
chr1	43995392	43995980	chr1:43995392-43995980	0	+	43995392	43995392	8553170	3	278,79,43,	0,385,545,
#Partially deleted in new
chr1	43996482	44031386	chr1:43996482-44031386	3	-	43997544	44024277	789624	14	1257,171,101,100,135,238,104,135,133,271,132,157,115,81,	0,1372,4284,4473,4681,4907,5830,6029,6370,11870,13482,14243,27765,34823,
#Partially deleted in new
chr1	43997442	44031386	chr1:43997442-44031386	1	-	43997544	44008609	789624	12	297,171,101,100,135,238,104,135,133,271,115,81,	0,412,3324,3513,3721,3947,4870,5069,5410,10910,26805,33863,
#Partially deleted in new
chr1	43997527	44017325	chr1:43997527-44017325	1	-	43997544	44017133	789624	13	212,171,101,100,135,238,104,135,133,271,132,157,279,	0,327,3239,3428,3636,3862,4785,4984,5325,10825,12437,13198,19519,
#Partially deleted in new
chr1	43997527	44017325	chr1:43997527-44017325	1	-	43997544	44017133	789624	14	212,171,101,100,135,238,104,135,133,271,132,157,162,279,	0,327,3239,3428,3636,3862,4785,4984,5325,10825,12437,13198,14033,19519,
#Partially deleted in new
chr1	44008514	44031467	chr1:44008514-44031467	0	-	44008514	44008514	8553170	5	109,132,74,115,162,	0,1450,2294,15733,22791,
#Partially deleted in new
chr1	44008596	44017332	chr1:44008596-44017332	0	-	44008596	44017133	789624	5	27,132,157,93,115,	0,1368,2129,8450,8621,
#Partially deleted in new
chr1	44010191	44031429	chr1:44010191-44031429	0	-	44010191	44010191	8553170	3	691,115,124,	0,14056,21114,
#Partially deleted in new
chr1	44010725	44031462	chr1:44010725-44031462	0	-	44010725	44024277	789624	4	157,162,115,157,	0,835,13522,20580,
#Deleted in new
chr1	44014629	44017340	chr1:44014629-44017340	0	-	44014629	44014629	8553170	2	214,294,	0,2417,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	44030442	44040273	chr1:44030442-44040273	0	+	44030442	44030442	8553170	2	115,367,	0,9464,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	44030443	44040023	chr1:44030443-44040023	0	+	44030443	44030443	8553170	2	25,117,	0,9463,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	44036125	44051116	chr1:44036125-44051116	0	+	44036125	44036125	8553170	4	46,165,76,167,	0,3781,9921,14824,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	44043496	44051115	chr1:44043496-44051115	0	+	44043496	44043496	8553170	4	85,76,129,166,	0,2550,4861,7453,
#Partially deleted in new
chr1	44043921	44048384	chr1:44043921-44048384	0	+	44043921	44043921	8553170	3	90,76,110,	0,2125,4353,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	44043921	44051116	chr1:44043921-44051116	0	+	44043921	44043921	8553170	3	90,76,167,	0,2125,7028,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	44044579	44051046	chr1:44044579-44051046	0	+	44044579	44044579	8553170	3	179,76,97,	0,1467,6370,
#Partially deleted in new
chr1	44044597	44046200	chr1:44044597-44046200	1	+	44044597	44044597	8553170	2	672,154,	0,1449,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	44044762	44050962	chr1:44044762-44050962	0	+	44044762	44044762	8553170	3	507,76,13,	0,1284,6187,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	44047946	44051116	chr1:44047946-44051116	0	+	44047946	44047946	8553170	2	540,167,	0,3003,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	44048376	44076412	chr1:44048376-44076412	1	+	44048376	44048376	8553170	3	110,242,322,	0,2913,27714,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	44051114	44076470	chr1:44051114-44076470	0	+	44051114	44051114	8553170	2	380,380,	0,24976,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	44087957	44088477	chr1:44087957-44088477	7	-	44087957	44087957	16724991	1	520,	0,
#Deleted in new
chr1	44103305	44104703	chr1:44103305-44104703	7	-	44103305	44103305	16724991	1	1398,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	44104488	44115301	chr1:44104488-44115301	0	+	44104488	44104488	8553170	3	618,64,148,	0,962,10665,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	44104509	44114925	chr1:44104509-44114925	0	+	44104509	44104509	8553170	3	597,94,1105,	0,911,9311,
#Partially deleted in new
chr1	44104834	44107055	chr1:44104834-44107055	0	+	44104834	44104834	8553170	3	272,94,200,	0,586,2021,
#Partially deleted in new
chr1	44104908	44106614	chr1:44104908-44106614	1	+	44104908	44104908	8553170	3	198,64,133,	0,542,1573,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	44104918	44114090	chr1:44104918-44114090	1	+	44104918	44104918	8553170	4	188,94,204,270,	0,502,5475,8902,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	44105498	44115913	chr1:44105498-44115913	1	+	44105498	44105498	8553170	3	16,350,555,	0,1357,9860,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	44117097	44117397	chr1:44117097-44117397	3	-	44117097	44117097	8553170	1	300,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	44118849	44135140	chr1:44118849-44135140	3	+	44118907	44130756	789624	4	139,844,245,1903,	0,10503,11662,14388,
#Partially deleted in new
chr1	44118869	44130716	chr1:44118869-44130716	0	+	44118907	44130092	789624	4	119,208,163,205,	0,10483,11164,11642,
#Deleted in new
chr1	44122152	44122512	chr1:44122152-44122512	7	-	44122152	44122152	16724991	1	360,	0,
#Deleted in new
chr1	44137820	44141631	chr1:44137820-44141631	3	-	44137820	44141631	789624	2	191,2968,	0,843,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	44150593	44151753	chr1:44150593-44151753	7	-	44150593	44150593	16724991	1	1160,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	44153384	44153480	chr1:44153384-44153480	3	-	44153384	44153384	8553170	1	96,	0,
#Deleted in new
chr1	44155027	44155301	chr1:44155027-44155301	7	-	44155027	44155027	16724991	1	274,	0,
#Deleted in new
chr1	44172505	44172719	chr1:44172505-44172719	7	-	44172505	44172505	16724991	1	214,	0,
#Partially deleted in new
chr1	44187942	44189049	chr1:44187942-44189049	7	-	44187942	44187942	16724991	2	691,105,	0,1002,
#Partially deleted in new
chr1	44213454	44220681	chr1:44213454-44220681	3	+	44213753	44220618	0	11	73,110,92,196,159,168,186,72,73,293,123,	0,294,895,1248,4856,5133,5601,5951,6351,6562,7104,
#Partially deleted in new
chr1	44213458	44219241	chr1:44213458-44219241	0	+	44213753	44219241	789624	7	69,196,92,196,159,168,186,	0,204,891,1244,4852,5129,5597,
#Partially deleted in new
chr1	44213470	44218747	chr1:44213470-44218747	0	+	44213753	44218747	789624	6	192,110,92,196,159,160,	0,278,879,1232,4840,5117,
#Deleted in new
chr1	44213472	44214880	chr1:44213472-44214880	0	+	44213753	44214880	789624	5	55,196,92,78,178,	0,190,877,1066,1230,
#Partially deleted in new
chr1	44213472	44219114	chr1:44213472-44219114	0	+	44213753	44219114	789624	8	55,150,92,78,196,159,168,59,	0,236,877,1066,1230,4838,5115,5583,
#Deleted in new
chr1	44213477	44215536	chr1:44213477-44215536	0	+	44213477	44213477	8553170	5	50,150,92,196,231,	0,231,872,1225,1828,
#Partially deleted in new
chr1	44213482	44218380	chr1:44213482-44218380	0	+	44213482	44213482	8553170	5	45,150,92,196,391,	0,226,867,1220,4507,
#Partially deleted in new
chr1	44213483	44218291	chr1:44213483-44218291	0	+	44213483	44213483	8553170	6	44,150,92,78,196,302,	0,225,866,1055,1219,4506,
#Partially deleted in new
chr1	44213487	44220681	chr1:44213487-44220681	1	+	44213753	44220618	0	11	40,150,92,196,159,168,186,72,73,293,123,	0,221,862,1215,4823,5100,5568,5918,6318,6529,7071,
#Partially deleted in new
chr1	44213490	44220681	chr1:44213490-44220681	1	+	44213753	44220618	0	10	368,92,196,159,168,186,72,73,293,123,	0,859,1212,4820,5097,5565,5915,6315,6526,7068,
#Deleted in new
chr1	44213502	44214724	chr1:44213502-44214724	0	+	44213502	44213502	8553170	3	25,150,375,	0,206,847,
#Partially deleted in new
chr1	44213840	44218430	chr1:44213840-44218430	0	+	44213840	44218430	789624	4	18,92,196,90,	0,509,862,4500,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	44214832	44220681	chr1:44214832-44220681	0	+	44214832	44214832	8553170	7	3637,168,186,72,73,293,123,	0,3755,4223,4573,4973,5184,5726,
#Deleted in new
chr1	44218364	44219830	chr1:44218364-44219830	0	+	44218364	44218364	8553170	5	105,168,186,72,51,	0,223,691,1041,1415,
#Deleted in new
chr1	44219419	44220681	chr1:44219419-44220681	0	+	44219419	44219419	8553170	4	58,73,427,123,	0,386,597,1139,
#Partially deleted in new
chr1	44221069	44355208	chr1:44221069-44355208	3	-	44221557	44355026	0	9	571,100,73,92,60,117,278,76,317,	0,26869,63765,87240,92099,98558,117975,131780,133822,
#Partially deleted in new
chr1	44221069	44323043	chr1:44221069-44323043	1	-	44221557	44322868	0	7	571,100,73,92,60,117,319,	0,26869,63765,87240,92099,98558,101655,
#Partially deleted in new
chr1	44221069	44319744	chr1:44221069-44319744	0	-	44221557	44319744	789624	7	571,100,84,73,92,60,117,	0,26869,62916,63765,87240,92099,98558,
#Partially deleted in new
chr1	44221338	44355061	chr1:44221338-44355061	1	-	44232371	44355026	8553170	10	302,149,100,73,92,60,117,278,76,170,	0,10901,26600,63496,86971,91830,98289,117706,131511,133553,
#Partially deleted in new
chr1	44221428	44247966	chr1:44221428-44247966	0	-	44230411	44247966	8553170	3	212,154,28,	0,8888,26510,
#Partially deleted in new
chr1	44221503	44248002	chr1:44221503-44248002	0	-	44241922	44248002	8553170	3	137,166,64,	0,20411,26435,
#Partially deleted in new
chr1	44221592	44256921	chr1:44221592-44256921	0	-	44221592	44221592	8553170	3	48,100,172,	0,26346,35157,
#Deleted in new
chr1	44243407	44244273	chr1:44243407-44244273	3	-	44243407	44243407	789624	2	590,29,	0,837,
#Partially deleted in new
chr1	44247985	44355260	chr1:44247985-44355260	0	-	44247985	44355026	789624	6	53,73,92,60,117,369,	0,36849,60324,65183,71642,106906,
#Partially deleted in new
chr1	44284829	44355238	chr1:44284829-44355238	0	-	44284829	44284829	8553170	6	78,92,60,117,278,347,	0,23480,28339,34798,54215,70062,
#Partially deleted in new
chr1	44308309	44355249	chr1:44308309-44355249	0	-	44308309	44355026	789624	6	92,60,117,272,76,358,	0,4859,11318,30735,44540,46582,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	44390721	44390823	chr1:44390721-44390823	3	+	44390721	44390721	8553170	1	102,	0,
#Partially deleted in new
chr1	44405193	44651723	chr1:44405193-44651723	3	+	44412097	44650775	789624	15	333,742,133,46,102,43,44,133,97,87,56,79,109,75,1020,	0,6787,208971,217548,221103,227149,230351,230836,239504,239801,240027,240216,244467,244689,245510,
#Partially deleted in new
chr1	44405287	44651723	chr1:44405287-44651723	1	+	44412097	44650775	789624	15	243,742,133,46,102,43,44,133,97,87,56,79,109,75,1020,	0,6693,208877,217454,221009,227055,230257,230742,239410,239707,239933,240122,244373,244595,245416,
#Partially deleted in new
chr1	44405287	44651724	chr1:44405287-44651724	1	+	44412097	44650775	789624	16	243,746,4,125,46,102,43,44,133,97,87,56,79,109,75,1021,	0,6693,167714,208885,217454,221009,227055,230257,230742,239410,239707,239933,240122,244373,244595,245416,
#Deleted in new
chr1	44408701	44412121	chr1:44408701-44412121	0	+	44408701	44408701	8553170	3	207,104,141,	0,1882,3279,
#Deleted in new
chr1	44412697	44419872	chr1:44412697-44419872	0	+	44412697	44412697	8553170	2	25,569,	0,6606,
#Deleted in new
chr1	44545492	44545552	chr1:44545492-44545552	3	+	44545492	44545492	5263520	1	60,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	44614264	44627057	chr1:44614264-44627057	0	+	44614264	44614264	8553170	3	33,46,761,	0,8477,12032,
#Partially deleted in new
chr1	44626325	44636152	chr1:44626325-44636152	0	+	44626325	44636152	789624	4	73,43,122,123,	0,6017,9219,9704,
#Partially deleted in new
chr1	44631731	44649769	chr1:44631731-44649769	0	+	44632154	44649769	789624	9	477,43,122,133,97,87,56,79,109,	0,611,3813,4298,12966,13263,13489,13678,17929,
#Partially deleted in new
chr1	44631731	44649957	chr1:44631731-44649957	0	+	44632154	44649957	789624	10	477,43,44,133,97,87,56,79,109,75,	0,611,3813,4298,12966,13263,13489,13678,17929,18151,
#Partially deleted in new
chr1	44631967	44651723	chr1:44631967-44651723	0	+	44631967	44631967	8553170	10	245,43,44,133,97,87,56,79,109,1841,	0,375,3577,4062,12730,13027,13253,13442,17693,17915,
#Partially deleted in new
chr1	44631974	44645081	chr1:44631974-44645081	0	+	44631974	44631974	8553170	6	238,43,122,133,97,87,	0,368,3570,4055,12723,13020,
#Deleted in new
chr1	44631983	44636495	chr1:44631983-44636495	0	+	44632154	44635581	789624	4	229,43,122,466,	0,359,3561,4046,
#Partially deleted in new
chr1	44632234	44645081	chr1:44632234-44645081	0	+	44632234	44632234	8553170	5	151,122,133,97,87,	0,3310,3795,12463,12760,
#Partially deleted in new
chr1	44632254	44650808	chr1:44632254-44650808	0	+	44632254	44632254	8553170	10	131,44,133,97,87,56,79,109,75,105,	0,3290,3775,12443,12740,12966,13155,17406,17628,18449,
#Partially deleted in new
chr1	44632644	44651723	chr1:44632644-44651723	0	+	44632644	44632644	8553170	10	251,44,133,97,87,56,79,109,75,1020,	0,2900,3385,12053,12350,12576,12765,17016,17238,18059,
#Partially deleted in new
chr1	44635237	44674459	chr1:44635237-44674459	1	-	44636409	44674391	789624	5	1220,105,270,122,129,	0,10122,19702,24936,39093,
#Partially deleted in new
chr1	44635237	44674462	chr1:44635237-44674462	1	-	44636409	44674391	789624	4	1220,105,122,132,	0,10122,24936,39093,
#Partially deleted in new
chr1	44635237	44674477	chr1:44635237-44674477	1	-	44636386	44674391	789624	3	1220,105,147,	0,10122,39093,
#Partially deleted in new
chr1	44636047	44674466	chr1:44636047-44674466	0	-	44636047	44636047	8553170	2	410,136,	0,38283,
#Partially deleted in new
chr1	44638295	44650890	chr1:44638295-44650890	0	+	44638295	44638295	8553170	8	120,97,87,56,79,109,75,187,	0,6402,6699,6925,7114,11365,11587,12408,
#Deleted in new
chr1	44643131	44651723	chr1:44643131-44651723	0	+	44643131	44643131	8553170	6	1663,87,56,79,109,1841,	0,1863,2089,2278,6529,6751,
#Deleted in new
chr1	44648307	44651723	chr1:44648307-44651723	0	+	44648307	44648307	8553170	2	1462,1841,	0,1575,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	44653246	44674555	chr1:44653246-44674555	3	-	44654558	44674391	789624	3	1963,122,225,	0,6927,21084,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	44653246	44674477	chr1:44653246-44674477	0	-	44653246	44653246	8553170	2	1870,147,	0,21084,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	44653246	44674442	chr1:44653246-44674442	0	-	44653246	44653246	8553170	2	1963,112,	0,21084,
#Partially deleted in new
chr1	44654464	44674443	chr1:44654464-44674443	1	-	44654558	44674391	789624	3	655,122,113,	0,5709,19866,
#Partially deleted in new
chr1	44654895	44674402	chr1:44654895-44674402	0	-	44654895	44674391	789624	3	221,122,72,	0,5278,19435,
#Partially deleted in new
chr1	44674712	44698133	chr1:44674712-44698133	0	+	44689697	44698133	789624	6	161,264,124,228,69,71,	0,9680,13483,14963,22389,23350,
#Partially deleted in new
chr1	44674712	44704111	chr1:44674712-44704111	0	+	44689697	44698065	789624	5	161,199,167,197,23,	0,14963,23350,26210,29376,
#Partially deleted in new
chr1	44674712	44725591	chr1:44674712-44725591	3	+	44689697	44725403	789624	13	161,124,228,69,167,197,85,123,73,130,78,82,301,	0,13483,14963,22389,23350,26210,29376,49409,49607,49826,50049,50423,50578,
#Partially deleted in new
chr1	44674721	44725589	chr1:44674721-44725589	0	+	44674721	44674721	8553170	10	152,228,69,167,197,85,123,349,444,299,	0,14954,22380,23341,26201,29367,49400,49598,50052,50569,
#Partially deleted in new
chr1	44674721	44704111	chr1:44674721-44704111	0	+	44689697	44704111	789624	6	152,228,69,167,197,23,	0,14954,22380,23341,26201,29367,
#Partially deleted in new
chr1	44674721	44725591	chr1:44674721-44725591	1	+	44689697	44725403	789624	12	152,228,69,167,197,85,123,73,130,78,82,301,	0,14954,22380,23341,26201,29367,49400,49598,49817,50040,50414,50569,
#Partially deleted in new
chr1	44674725	44701109	chr1:44674725-44701109	0	+	44689697	44701109	789624	6	148,264,228,69,167,187,	0,9667,14950,22376,23337,26197,
#Partially deleted in new
chr1	44674757	44724362	chr1:44674757-44724362	0	+	44674757	44674757	8553170	5	116,197,85,123,43,	0,26165,29331,49364,49562,
#Partially deleted in new
chr1	44674779	44724343	chr1:44674779-44724343	0	+	44674779	44674779	8553170	6	94,133,197,85,123,24,	0,14962,26143,29309,49342,49540,
#Partially deleted in new
chr1	44689833	44724380	chr1:44689833-44724380	0	+	44689833	44724380	789624	5	41,197,85,123,44,	0,11089,14255,34288,34503,
#Partially deleted in new
chr1	44700972	44724379	chr1:44700972-44724379	0	+	44700972	44700972	8553170	3	147,123,60,	0,23149,23347,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	44721785	44721902	chr1:44721785-44721902	3	-	44721785	44721785	789624	1	117,	0,
#Deleted in new
chr1	44723784	44724427	chr1:44723784-44724427	0	+	44723784	44723784	8553170	3	122,123,108,	0,337,535,
#Deleted in new
chr1	44723791	44724378	chr1:44723791-44724378	0	+	44723791	44723791	8553170	3	115,260,59,	0,193,528,
#Deleted in new
chr1	44723794	44724304	chr1:44723794-44724304	0	+	44723794	44723794	8553170	2	112,183,	0,327,
#Deleted in new
chr1	44723830	44724362	chr1:44723830-44724362	0	+	44723830	44723830	8553170	2	76,378,	0,154,
#Deleted in new
chr1	44723843	44724380	chr1:44723843-44724380	0	+	44723843	44723843	8553170	2	401,61,	0,476,
#Deleted in new
chr1	44724372	44725591	chr1:44724372-44725591	0	+	44724372	44724372	8553170	4	296,78,82,301,	0,389,763,918,
#Deleted in new
chr1	44724506	44725591	chr1:44724506-44725591	0	+	44724506	44724506	8553170	4	162,78,185,301,	0,255,526,784,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	44731054	44731170	chr1:44731054-44731170	3	-	44731054	44731054	789624	1	116,	0,
#Partially deleted in new
chr1	44739817	44757971	chr1:44739817-44757971	0	+	44739932	44757971	789624	11	185,95,102,49,123,101,96,55,163,91,64,	0,1095,7566,7834,10624,13915,14932,16111,16257,17738,18090,
#Partially deleted in new
chr1	44739819	44767767	chr1:44739819-44767767	3	+	44739932	44767179	0	21	183,95,102,49,123,123,101,96,55,163,91,64,92,143,205,111,68,106,114,124,671,	0,1093,7564,7832,10622,13312,13913,14930,16109,16255,17736,18088,18229,19386,20460,20772,22096,22526,22725,27006,27277,
#Partially deleted in new
chr1	44739824	44757968	chr1:44739824-44757968	0	+	44739824	44739824	8553170	10	178,95,102,49,123,101,96,195,91,61,	0,1088,7559,7827,10617,13908,14925,16218,17731,18083,
#Partially deleted in new
chr1	44739952	44756148	chr1:44739952-44756148	0	+	44739999	44756148	789624	10	90,95,102,49,123,123,101,96,55,74,	0,960,7431,7699,10489,13179,13780,14797,15976,16122,
#Partially deleted in new
chr1	44746405	44767767	chr1:44746405-44767767	1	+	44746756	44767179	0	20	354,102,49,123,123,101,96,55,163,91,64,92,143,205,111,68,106,114,124,671,	0,978,1246,4036,6726,7327,8344,9523,9669,11150,11502,11643,12800,13874,14186,15510,15940,16139,20420,20691,
#Partially deleted in new
chr1	44746405	44753153	chr1:44746405-44753153	0	+	44746405	44746405	8553170	5	354,102,49,256,22,	0,978,1246,3903,6726,
#Partially deleted in new
chr1	44759036	44762177	chr1:44759036-44762177	0	-	44759036	44759036	8553170	3	306,106,98,	0,1925,3043,
#Partially deleted in new
chr1	44759123	44775810	chr1:44759123-44775810	3	-	44759123	44759123	8553170	3	219,106,255,	0,1838,16432,
#Partially deleted in new
chr1	44760479	44762613	chr1:44760479-44762613	0	+	44760479	44762613	789624	5	5,111,68,67,69,	0,112,1436,1749,2065,
#Partially deleted in new
chr1	44762139	44766879	chr1:44762139-44766879	0	+	44762139	44762139	8553170	3	312,114,54,	0,405,4686,
#Partially deleted in new
chr1	44775250	44778087	chr1:44775250-44778087	0	+	44775250	44775250	8553170	5	223,107,100,176,88,	0,783,1424,2363,2749,
#Partially deleted in new
chr1	44775436	44778779	chr1:44775436-44778779	3	+	44775596	44778685	0	6	164,107,100,176,130,204,	0,597,1238,2177,2563,3139,
#Partially deleted in new
chr1	44775572	44778779	chr1:44775572-44778779	1	+	44775596	44778685	789624	6	28,107,40,176,130,204,	0,461,1102,2041,2427,3003,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	44775577	44777525	chr1:44775577-44777525	0	+	44775577	44775577	8553170	3	23,107,851,	0,456,1097,
#Partially deleted in new
chr1	44775635	44778779	chr1:44775635-44778779	0	+	44775635	44775635	8553170	5	505,100,176,130,204,	0,1039,1978,2364,2940,
#Partially deleted in new
chr1	44775863	44775943	chr1:44775863-44775943	3	+	44775863	44775863	789624	1	80,	0,
#Partially deleted in new
chr1	44776489	44776593	chr1:44776489-44776593	3	+	44776489	44776489	789624	1	104,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	44777225	44778779	chr1:44777225-44778779	0	+	44777225	44777225	8553170	3	564,130,204,	0,774,1350,
#Partially deleted in new
chr1	44777549	44778663	chr1:44777549-44778663	0	+	44777549	44777549	8553170	2	188,664,	0,450,
#Partially deleted in new
chr1	44777842	44777912	chr1:44777842-44777912	3	+	44777842	44777842	789624	1	70,	0,
#Partially deleted in new
chr1	44777902	44778739	chr1:44777902-44778739	0	+	44777902	44777902	8553170	2	227,164,	0,673,
#Partially deleted in new
chr1	44778389	44778456	chr1:44778389-44778456	3	+	44778389	44778389	8553170	1	67,	0,
#Partially deleted in new
chr1	44778389	44778458	chr1:44778389-44778458	3	+	44778389	44778389	789624	1	69,	0,
#Partially deleted in new
chr1	44780330	44780715	chr1:44780330-44780715	7	-	44780330	44780330	16724991	1	385,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	44783584	44787705	chr1:44783584-44787705	3	-	44784209	44787705	789624	9	899,155,81,198,78,155,234,95,152,	0,1044,1320,1523,2014,2489,2878,3787,3969,
#Partially deleted in new
chr1	44800224	44805990	chr1:44800224-44805990	3	+	44800463	44805678	0	15	449,108,117,130,88,96,199,124,92,94,84,163,130,114,504,	0,615,811,1397,1620,2535,2730,3043,3375,3706,3938,4114,4425,5041,5262,
#Partially deleted in new
chr1	44800387	44805990	chr1:44800387-44805990	0	+	44800387	44800387	8553170	14	286,108,117,130,88,96,199,124,92,94,84,441,114,504,	0,452,648,1234,1457,2372,2567,2880,3212,3543,3775,3951,4878,5099,
#Deleted in new
chr1	44801633	44803621	chr1:44801633-44803621	0	+	44801633	44801633	8553170	5	118,88,96,437,22,	0,211,1126,1321,1966,
#Partially deleted in new
chr1	44803267	44805950	chr1:44803267-44805950	0	+	44803267	44803267	8553170	7	124,92,94,84,163,114,464,	0,332,663,895,1071,1998,2219,
#Deleted in new
chr1	44803336	44804689	chr1:44803336-44804689	0	+	44803336	44803336	8553170	5	55,425,84,163,40,	0,263,826,1002,1313,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	44804217	44805121	chr1:44804217-44805121	0	+	44804217	44804217	8553170	3	29,163,472,	0,121,432,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	44804620	44805600	chr1:44804620-44805600	0	+	44804620	44804620	8553170	2	759,114,	0,866,
#Deleted in new
chr1	44805912	44806675	chr1:44805912-44806675	3	-	44806002	44806668	789624	1	763,	0,
#Partially deleted in new
chr1	44808481	44814129	chr1:44808481-44814129	3	+	44808820	44813772	789624	8	425,214,54,60,69,132,126,492,	0,1731,2072,3557,4514,4656,4892,5156,
#Partially deleted in new
chr1	44808522	44813926	chr1:44808522-44813926	1	+	44808820	44813772	789624	6	384,214,69,132,126,289,	0,1690,4473,4615,4851,5115,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	44808595	44815585	chr1:44808595-44815585	0	+	44808595	44808595	8553170	4	311,274,126,1948,	0,4400,4778,5042,
#Partially deleted in new
chr1	44808810	44813379	chr1:44808810-44813379	0	+	44808810	44808810	8553170	6	96,37,54,60,69,242,	0,1402,1743,3228,4185,4327,
#Partially deleted in new
chr1	44810659	44813450	chr1:44810659-44813450	0	+	44810659	44810659	8553170	4	63,60,69,313,	0,1379,2336,2478,
#Partially deleted in new
chr1	44811679	44813965	chr1:44811679-44813965	0	+	44811679	44811679	8553170	5	146,60,274,126,328,	0,359,1316,1694,1958,
#Deleted in new
chr1	44813173	44813850	chr1:44813173-44813850	0	+	44813173	44813173	8553170	2	326,213,	0,464,
#Deleted in new
chr1	44813497	44814099	chr1:44813497-44814099	0	+	44813497	44813497	8553170	2	43,462,	0,140,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	44819843	44823260	chr1:44819843-44823260	0	-	44820688	44823260	789624	5	861,63,68,100,18,	0,1998,2758,3225,3399,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr1	44819843	44842944	chr1:44819843-44842944	1	-	44820688	44842932	789624	23	861,68,100,143,138,281,181,143,313,349,119,126,93,156,132,148,122,196,92,70,190,193,84,	0,2758,3225,3399,6406,6644,7058,7323,7558,7999,8452,8662,9138,9313,9558,9770,10065,11004,11862,12131,12308,22003,23017,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	44819882	44819997	chr1:44819882-44819997	3	-	44819882	44819882	8553170	1	115,	0,
#Partially deleted in new
chr1	44821932	44843063	chr1:44821932-44843063	3	-	44822414	44842932	789624	22	737,100,143,138,281,181,143,313,349,119,126,93,156,132,148,122,196,92,70,190,193,203,	0,1136,1310,4317,4555,4969,5234,5469,5910,6363,6573,7049,7224,7469,7681,7976,8915,9773,10042,10219,19914,20928,
#Partially deleted in new
chr1	44843920	44844082	chr1:44843920-44844082	7	-	44843920	44843920	16724991	1	162,	0,
#Partially deleted in new
chr1	44850521	44986722	chr1:44850521-44986722	1	-	44850999	44981168	0	11	482,149,78,191,128,90,112,160,146,157,230,	0,24156,25096,29296,31090,46833,76106,90984,127793,130499,135971,
#Partially deleted in new
chr1	44850775	44926655	chr1:44850775-44926655	0	-	44850999	44926655	789624	7	228,149,78,191,128,90,28,	0,23902,24842,29042,30836,46579,75852,
#Partially deleted in new
chr1	44850777	44986610	chr1:44850777-44986610	3	-	44850950	44981168	0	12	226,104,149,78,191,128,90,112,160,146,157,118,	0,6926,23900,24840,29040,30834,46577,75850,90728,127537,130243,135715,
#Partially deleted in new
chr1	44863003	44875622	chr1:44863003-44875622	0	-	44863003	44863003	8553170	3	158,149,5,	0,11674,12614,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	44874526	44986587	chr1:44874526-44986587	1	-	44874640	44981168	0	10	300,78,191,128,90,112,160,146,157,95,	0,1091,5291,7085,22828,52101,66979,103788,106494,111966,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	44924957	44986599	chr1:44924957-44986599	0	-	44941639	44981168	789624	7	333,112,160,67,146,157,107,	0,1670,16548,45020,53357,56063,61535,
#Partially deleted in new
chr1	44926627	44986586	chr1:44926627-44986586	0	-	44926627	44926627	8553170	7	112,92,160,67,146,157,94,	0,10629,14878,43350,51687,54393,59865,
#Partially deleted in new
chr1	44932322	44932431	chr1:44932322-44932431	7	+	44932322	44932322	16724991	1	109,	0,
#Partially deleted in new
chr1	44958556	44959395	chr1:44958556-44959395	7	+	44958556	44958556	16724991	1	839,	0,
#Partially deleted in new
chr1	44958560	44986595	chr1:44958560-44986595	0	-	44958560	44958560	8553170	4	347,146,157,103,	0,19754,22460,27932,
#Deleted in new
chr1	44988233	44988725	chr1:44988233-44988725	7	-	44988233	44988233	16724991	1	492,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	44988704	44991834	chr1:44988704-44991834	7	-	44988704	44988704	16724991	1	3130,	0,
#Partially deleted in new
chr1	45002539	45008551	chr1:45002539-45008551	1	-	45003491	45008389	789624	13	1037,72,82,75,130,207,90,120,104,65,53,183,312,	0,1129,1315,1520,1708,2060,3254,3457,4152,4411,4679,4873,5700,
#Partially deleted in new
chr1	45002539	45011329	chr1:45002539-45011329	3	-	45003491	45011257	789624	21	1037,72,82,75,130,207,90,120,104,65,53,183,82,166,83,114,116,136,93,161,441,	0,1129,1315,1520,1708,2060,3254,3457,4152,4411,4679,4873,5700,5996,6604,6829,7028,7446,7661,8006,8349,
#Deleted in new
chr1	45002539	45005588	chr1:45002539-45005588	0	-	45002539	45002539	8553170	6	1037,72,82,75,130,989,	0,1129,1315,1520,1708,2060,
#Deleted in new
chr1	45003854	45006224	chr1:45003854-45006224	0	-	45003854	45003854	8553170	6	82,75,130,207,90,228,	0,205,393,745,1939,2142,
#Partially deleted in new
chr1	45004059	45007228	chr1:45004059-45007228	0	-	45004059	45004059	8553170	7	75,130,207,323,104,65,10,	0,188,540,1734,2632,2891,3159,
#Partially deleted in new
chr1	45005644	45006967	chr1:45005644-45006967	0	-	45005644	45005644	8553170	3	472,104,17,	0,1047,1306,
#Partially deleted in new
chr1	45006072	45007116	chr1:45006072-45007116	0	-	45006072	45006072	8553170	3	44,104,166,	0,619,878,
#Deleted in new
chr1	45012146	45015575	chr1:45012146-45015575	3	+	45012265	45015498	0	10	139,113,80,63,198,162,138,101,67,239,	0,760,989,1145,1447,1762,2292,2589,2793,3190,
#Deleted in new
chr1	45012161	45013956	chr1:45012161-45013956	0	+	45012161	45012161	8553170	6	124,163,80,63,198,48,	0,695,974,1130,1432,1747,
#Deleted in new
chr1	45012184	45013889	chr1:45012184-45013889	0	+	45012184	45012184	8553170	3	101,113,754,	0,722,951,
#Deleted in new
chr1	45012206	45015575	chr1:45012206-45015575	1	+	45012265	45015498	789624	9	79,113,80,63,198,162,101,67,239,	0,700,929,1085,1387,1702,2529,2733,3130,
#Deleted in new
chr1	45012206	45015575	chr1:45012206-45015575	1	+	45012265	45015358	789624	9	79,113,80,63,198,162,138,101,239,	0,700,929,1085,1387,1702,2232,2529,3130,
#Deleted in new
chr1	45012211	45013460	chr1:45012211-45013460	0	+	45012211	45012211	8553170	4	74,163,80,169,	0,645,924,1080,
#Deleted in new
chr1	45012215	45014567	chr1:45012215-45014567	0	+	45012215	45012215	8553170	7	70,163,80,63,217,162,129,	0,641,920,1076,1359,1693,2223,
#Deleted in new
chr1	45012245	45014445	chr1:45012245-45014445	0	+	45012265	45014445	789624	6	40,113,80,198,162,7,	0,661,890,1348,1663,2193,
#Deleted in new
chr1	45012251	45015575	chr1:45012251-45015575	0	+	45012251	45012251	8553170	7	34,163,219,198,928,67,239,	0,605,884,1342,1657,2688,3085,
#Deleted in new
chr1	45012257	45014070	chr1:45012257-45014070	0	+	45012257	45012257	8553170	6	28,113,80,63,217,162,	0,649,878,1034,1317,1651,
#Deleted in new
chr1	45012264	45014576	chr1:45012264-45014576	0	+	45012264	45012264	8553170	6	21,163,219,198,162,138,	0,592,871,1329,1644,2174,
#Deleted in new
chr1	45012267	45014120	chr1:45012267-45014120	0	+	45012267	45012267	8553170	5	18,113,80,63,546,	0,639,868,1024,1307,
#Deleted in new
chr1	45012267	45014220	chr1:45012267-45014220	0	+	45012267	45012267	8553170	5	18,113,219,198,312,	0,639,868,1326,1641,
#Deleted in new
chr1	45012690	45014809	chr1:45012690-45014809	0	+	45012690	45012690	8553170	7	329,80,63,198,162,138,74,	0,445,601,903,1218,1748,2045,
#Deleted in new
chr1	45012785	45014809	chr1:45012785-45014809	0	+	45012785	45012785	8553170	7	234,80,63,217,162,138,74,	0,350,506,789,1123,1653,1950,
#Deleted in new
chr1	45012803	45014815	chr1:45012803-45014815	0	+	45012803	45012803	8553170	6	216,63,198,162,138,80,	0,488,790,1105,1635,1932,
#Deleted in new
chr1	45012906	45014825	chr1:45012906-45014825	0	+	45012906	45014825	789624	6	113,80,63,198,138,90,	0,229,385,687,1532,1829,
#Deleted in new
chr1	45012907	45014138	chr1:45012907-45014138	0	+	45012907	45012907	8553170	4	112,80,63,545,	0,228,384,686,
#Deleted in new
chr1	45012934	45014019	chr1:45012934-45014019	0	+	45012934	45012934	8553170	4	85,219,217,111,	0,201,640,974,
#Deleted in new
chr1	45014049	45015575	chr1:45014049-45015575	0	+	45014049	45014049	8553170	4	527,101,67,239,	0,686,890,1287,
#Deleted in new
chr1	45014538	45015392	chr1:45014538-45015392	0	+	45014538	45014538	8553170	2	468,56,	0,798,
#Deleted in new
chr1	45014546	45015405	chr1:45014546-45015405	0	+	45014546	45014546	8553170	2	290,466,	0,393,
#Partially deleted in new
chr1	45016398	45206556	chr1:45016398-45206556	3	-	45018453	45206350	789624	14	2918,82,164,158,136,261,138,147,177,180,151,149,357,801,	0,3667,4226,17913,19289,19640,22537,23993,26820,34675,42210,43700,71482,189357,
#Deleted in new
chr1	45069976	45070429	chr1:45069976-45070429	7	-	45069976	45069976	16724991	1	453,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	45088074	45306209	chr1:45088074-45306209	0	-	45088074	45088074	8553170	3	163,131,96,	0,215852,218039,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	45303909	45305619	chr1:45303909-45305619	3	+	45303909	45303909	5263520	1	1710,	0,
#Deleted in new
chr1	45326904	45328533	chr1:45326904-45328533	3	+	45327148	45328264	789624	1	1629,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	45329162	45340447	chr1:45329162-45340447	1	-	45329305	45334505	789624	7	275,42,153,137,72,121,229,	0,1353,2019,2257,3600,5228,11056,
#Partially deleted in new
chr1	45329241	45340080	chr1:45329241-45340080	1	-	45329305	45334505	0	16	196,42,153,137,189,64,145,98,114,72,42,74,40,152,121,105,	0,1274,1940,2178,2419,2781,2924,3149,3332,3521,3676,3855,4043,4171,5149,10734,
#Partially deleted in new
chr1	45329241	45340115	chr1:45329241-45340115	1	-	45329305	45334505	0	16	196,42,153,137,189,64,145,98,114,72,42,74,40,149,121,140,	0,1274,1940,2178,2419,2781,2924,3149,3332,3521,3676,3855,4043,4171,5149,10734,
#Partially deleted in new
chr1	45329241	45340388	chr1:45329241-45340388	3	-	45329305	45340254	0	16	196,42,153,137,189,64,145,98,114,72,42,74,40,182,121,170,	0,1274,1940,2178,2419,2781,2924,3149,3332,3521,3676,3855,4043,4171,5149,10977,
#Partially deleted in new
chr1	45329241	45339935	chr1:45329241-45339935	1	-	45329305	45334505	0	17	196,42,153,137,189,64,145,98,114,72,42,74,40,149,121,150,37,	0,1274,1940,2178,2419,2781,2924,3149,3332,3521,3676,3855,4043,4171,5149,9265,10657,
#Partially deleted in new
chr1	45329241	45340388	chr1:45329241-45340388	1	-	45329305	45340254	0	16	196,42,153,137,189,64,145,98,114,72,42,74,40,152,121,170,	0,1274,1940,2178,2419,2781,2924,3149,3332,3521,3676,3855,4043,4171,5149,10977,
#Partially deleted in new
chr1	45329241	45340470	chr1:45329241-45340470	1	-	45329305	45340254	0	16	196,42,153,137,189,64,145,98,114,72,42,74,40,149,121,252,	0,1274,1940,2178,2419,2781,2924,3149,3332,3521,3676,3855,4043,4171,5149,10977,
#Partially deleted in new
chr1	45329241	45339935	chr1:45329241-45339935	1	-	45329305	45334505	0	16	196,42,153,137,189,64,145,98,114,72,42,74,40,182,121,37,	0,1274,1940,2178,2419,2781,2924,3149,3332,3521,3676,3855,4043,4171,5149,10657,
#Partially deleted in new
chr1	45329241	45339954	chr1:45329241-45339954	1	-	45329305	45334505	0	16	196,42,153,137,189,64,145,98,114,72,42,74,40,149,121,56,	0,1274,1940,2178,2419,2781,2924,3149,3332,3521,3676,3855,4043,4171,5149,10657,
#Partially deleted in new
chr1	45329241	45340080	chr1:45329241-45340080	0	-	45333489	45334505	789624	16	196,42,153,137,189,64,145,98,114,72,42,74,40,85,121,105,	0,1274,1940,2178,2419,2781,2924,3149,3332,3521,3676,3855,4043,4171,5149,10734,
#Partially deleted in new
chr1	45329241	45340388	chr1:45329241-45340388	0	-	45333489	45340254	789624	16	196,42,153,137,189,64,145,98,114,72,42,74,40,85,121,170,	0,1274,1940,2178,2419,2781,2924,3149,3332,3521,3676,3855,4043,4171,5149,10977,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	45329241	45331270	chr1:45329241-45331270	0	-	45330065	45331270	789624	4	196,180,42,89,	0,647,1274,1940,
#Partially deleted in new
chr1	45329242	45340470	chr1:45329242-45340470	1	-	45329305	45340254	789624	16	195,42,153,137,189,64,145,98,114,72,42,74,40,191,121,252,	0,1273,1939,2177,2418,2780,2923,3148,3331,3520,3675,3854,4042,4170,5148,10976,
#Partially deleted in new
chr1	45329242	45339995	chr1:45329242-45339995	1	-	45329305	45334505	789624	7	195,42,153,137,72,121,20,	0,1273,1939,2177,3520,5148,10733,
#Partially deleted in new
chr1	45329245	45340163	chr1:45329245-45340163	1	-	45329363	45334505	789624	3	192,121,188,	0,5145,10730,
#Partially deleted in new
chr1	45329271	45332488	chr1:45329271-45332488	0	-	45331520	45332488	789624	8	166,42,153,137,212,64,145,98,	0,1244,1910,2148,2389,2751,2894,3119,
#Partially deleted in new
chr1	45329272	45332083	chr1:45329272-45332083	0	-	45329272	45329272	8553170	5	165,42,153,137,423,	0,1243,1909,2147,2388,
#Partially deleted in new
chr1	45329273	45332278	chr1:45329273-45332278	0	-	45329305	45332278	789624	6	164,42,153,137,64,113,	0,1242,1908,2146,2749,2892,
#Partially deleted in new
chr1	45329275	45334511	chr1:45329275-45334511	0	-	45332423	45334511	789624	10	162,42,153,137,189,64,145,98,114,121,	0,1240,1906,2144,2385,2747,2890,3115,3298,5115,
#Partially deleted in new
chr1	45329305	45339946	chr1:45329305-45339946	1	-	45329305	45334505	789624	16	132,42,153,137,189,64,145,98,114,72,42,74,40,191,121,48,	0,1210,1876,2114,2355,2717,2860,3085,3268,3457,3612,3791,3979,4107,5085,10593,
#Partially deleted in new
chr1	45331733	45340381	chr1:45331733-45340381	0	-	45331733	45340254	789624	7	116,64,145,98,114,72,163,	0,289,432,657,840,1029,8485,
#Deleted in new
chr1	45331746	45332945	chr1:45331746-45332945	0	-	45331746	45331746	8553170	5	340,145,98,114,183,	0,419,644,827,1016,
#Deleted in new
chr1	45331769	45332379	chr1:45331769-45332379	0	-	45331769	45331769	8553170	3	80,64,214,	0,253,396,
#Partially deleted in new
chr1	45332024	45340010	chr1:45332024-45340010	0	-	45332423	45334505	789624	9	62,145,98,114,72,40,152,121,35,	0,141,366,549,738,1260,1388,2366,7951,
#Partially deleted in new
chr1	45332035	45340415	chr1:45332035-45340415	0	-	45333489	45340254	789624	10	51,145,98,114,72,42,40,85,121,197,	0,130,355,538,727,882,1249,1377,2355,8183,
#Partially deleted in new
chr1	45332174	45340000	chr1:45332174-45340000	0	-	45332174	45334505	789624	10	136,98,114,72,42,74,40,182,121,25,	0,216,399,588,743,922,1110,1238,2216,7801,
#Partially deleted in new
chr1	45332219	45340387	chr1:45332219-45340387	0	-	45334425	45340254	789624	10	91,98,114,72,42,74,40,152,121,185,	0,171,354,543,698,877,1065,1193,2171,7983,
#Deleted in new
chr1	45332222	45333324	chr1:45332222-45333324	0	-	45332222	45332222	8553170	5	88,98,114,72,407,	0,168,351,540,695,
#Partially deleted in new
chr1	45332403	45340414	chr1:45332403-45340414	0	-	45333313	45340254	789624	7	85,114,72,42,40,121,196,	0,170,359,514,881,1987,7815,
#Partially deleted in new
chr1	45332566	45339955	chr1:45332566-45339955	0	-	45332566	45332566	8553170	5	604,40,149,121,57,	0,718,846,1824,7332,
#Partially deleted in new
chr1	45332578	45339955	chr1:45332578-45339955	0	-	45332578	45332578	8553170	5	109,562,149,121,57,	0,184,834,1812,7320,
#Partially deleted in new
chr1	45332614	45340397	chr1:45332614-45340397	0	-	45332614	45332614	8553170	5	73,562,149,121,175,	0,148,798,1776,7608,
#Partially deleted in new
chr1	45332676	45340415	chr1:45332676-45340415	0	-	45332676	45332676	8553170	4	648,85,121,197,	0,736,1714,7542,
#Partially deleted in new
chr1	45332745	45339942	chr1:45332745-45339942	0	-	45332745	45332745	8553170	5	89,407,149,121,44,	0,172,667,1645,7153,
#Partially deleted in new
chr1	45332762	45340432	chr1:45332762-45340432	0	-	45332762	45332762	8553170	5	408,40,149,121,214,	0,522,650,1628,7456,
#Partially deleted in new
chr1	45332839	45340432	chr1:45332839-45340432	0	-	45332839	45332839	8553170	3	485,121,214,	0,1551,7379,
#Partially deleted in new
chr1	45333052	45340091	chr1:45333052-45340091	0	-	45333052	45333052	8553170	5	118,40,182,121,116,	0,232,360,1338,6923,
#Partially deleted in new
chr1	45333412	45339945	chr1:45333412-45339945	0	-	45333412	45338197	789624	4	149,121,471,47,	0,978,4773,6486,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	45334099	45340235	chr1:45334099-45340235	0	-	45334099	45334099	8553170	2	412,260,	0,5876,
#Deleted in new
chr1	45339669	45343975	chr1:45339669-45343975	3	+	45340252	45343702	0	8	635,143,41,97,159,260,160,894,	0,1403,1633,1803,2279,2714,3173,3412,
#Deleted in new
chr1	45340051	45342761	chr1:45340051-45342761	0	+	45340051	45340051	8553170	7	271,143,41,97,159,260,23,	0,1021,1251,1421,1897,2332,2687,
#Deleted in new
chr1	45340174	45342978	chr1:45340174-45342978	0	+	45340174	45340174	8553170	7	130,143,41,97,159,260,244,	0,898,1128,1298,1774,2209,2560,
#Deleted in new
chr1	45340220	45343964	chr1:45340220-45343964	0	+	45340220	45340220	8553170	8	322,143,41,97,159,260,268,883,	0,852,1082,1252,1728,2163,2514,2861,
#Deleted in new
chr1	45341295	45342859	chr1:45341295-45342859	0	+	45341295	45341295	8553170	4	48,159,260,125,	0,653,1088,1439,
#Partially deleted in new
chr1	45343882	45457799	chr1:45343882-45457799	1	-	45344839	45457785	789624	9	1676,118,84,85,83,147,49,122,236,	0,1994,3096,3726,4035,11420,42029,77842,113681,
#Partially deleted in new
chr1	45343882	45491166	chr1:45343882-45491166	3	-	45344839	45457785	789624	11	1676,118,87,84,85,83,147,49,122,308,315,	0,1994,2810,3096,3726,4035,11420,42029,77842,113681,146969,
#Partially deleted in new
chr1	45343883	45491161	chr1:45343883-45491161	0	-	45343883	45343883	8553170	10	1675,118,87,84,85,83,147,122,308,310,	0,1993,2809,3095,3725,4034,11419,77841,113680,146968,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	45398732	45457621	chr1:45398732-45457621	0	-	45398732	45398732	8553170	3	248,122,58,	0,22992,58831,
#Deleted in new
chr1	45415019	45415344	chr1:45415019-45415344	7	+	45415019	45415019	16724991	1	325,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	45493865	45500079	chr1:45493865-45500079	0	-	45495518	45499609	789624	6	1301,128,68,85,99,548,	0,1552,2690,3433,5479,5666,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	45493925	45500048	chr1:45493925-45500048	0	-	45496599	45499609	789624	5	1241,128,68,99,517,	0,1492,2630,5419,5606,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	45493936	45498625	chr1:45493936-45498625	0	-	45493936	45493936	8553170	5	1230,128,68,85,183,	0,1481,2619,3362,4506,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	45494391	45499974	chr1:45494391-45499974	1	-	45495446	45499609	789624	6	775,56,68,85,99,443,	0,1026,2164,2907,4953,5140,
#Partially deleted in new
chr1	45494908	45499974	chr1:45494908-45499974	0	-	45496586	45499609	789624	6	258,128,68,80,99,443,	0,509,1647,2395,4436,4623,
#Partially deleted in new
chr1	45494908	45499974	chr1:45494908-45499974	3	-	45495058	45499609	789624	5	258,68,85,99,443,	0,1647,2390,4436,4623,
#Partially deleted in new
chr1	45495431	45500053	chr1:45495431-45500053	0	-	45495431	45495431	8553170	5	114,68,85,96,522,	0,1124,1867,3913,4100,
#Partially deleted in new
chr1	45496210	45499853	chr1:45496210-45499853	0	-	45496210	45496210	8553170	4	413,85,99,322,	0,1088,3134,3321,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	45500052	45513382	chr1:45500052-45513382	3	+	45500332	45509215	0	4	361,195,153,4587,	0,7303,8159,8743,
#Partially deleted in new
chr1	45500340	45511065	chr1:45500340-45511065	1	+	45507445	45509215	789624	5	73,195,153,552,537,	0,7015,7871,8455,10188,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	45509432	45510505	chr1:45509432-45510505	0	+	45509432	45509432	8553170	2	76,531,	0,542,
#Partially deleted in new
chr1	45511035	45521938	chr1:45511035-45521938	1	-	45511328	45519043	0	6	379,131,123,154,117,330,	0,3471,3837,4618,7902,10573,
#Partially deleted in new
chr1	45511046	45521956	chr1:45511046-45521956	3	-	45511328	45519043	0	6	368,131,123,154,117,128,	0,3460,3826,4607,7891,10782,
#Partially deleted in new
chr1	45511050	45521854	chr1:45511050-45521854	1	-	45511328	45519043	789624	5	364,131,23,65,26,	0,3456,3822,7939,10778,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	45514506	45523047	chr1:45514506-45523047	0	-	45514506	45519043	789624	5	131,123,154,117,270,	0,366,1147,4431,8271,
#Partially deleted in new
chr1	45514506	45521938	chr1:45514506-45521938	0	-	45514506	45519043	789624	5	131,123,154,117,81,	0,366,1147,4431,7351,
#Partially deleted in new
chr1	45515653	45521867	chr1:45515653-45521867	0	-	45515653	45515653	8553170	3	154,117,259,	0,3284,5955,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	45530926	45532139	chr1:45530926-45532139	7	+	45530926	45530926	16724991	3	114,300,184,	0,420,1029,
#Partially deleted in new
chr1	45550542	45570049	chr1:45550542-45570049	3	+	45561794	45569956	0	10	613,128,90,120,152,196,200,73,87,159,	0,1893,11246,16026,16326,17439,17942,18384,18600,19348,
#Partially deleted in new
chr1	45550782	45570048	chr1:45550782-45570048	1	+	45561794	45569956	0	10	94,190,90,120,152,196,200,73,87,158,	0,183,11006,15786,16086,17199,17702,18144,18360,19108,
#Partially deleted in new
chr1	45550803	45568068	chr1:45550803-45568068	0	+	45561794	45568068	789624	7	73,190,128,90,120,152,87,	0,162,1632,10985,15765,16065,17178,
#Partially deleted in new
chr1	45550845	45567213	chr1:45550845-45567213	0	+	45550845	45550845	8553170	3	310,120,345,	0,15723,16023,
#Partially deleted in new
chr1	45550853	45568624	chr1:45550853-45568624	0	+	45550853	45550853	8553170	5	302,120,152,196,140,	0,15715,16015,17128,17631,
#Partially deleted in new
chr1	45551066	45570049	chr1:45551066-45570049	1	+	45561794	45569956	0	9	89,90,120,152,196,200,73,87,159,	0,10722,15502,15802,16915,17418,17860,18076,18824,
#Partially deleted in new
chr1	45551066	45568025	chr1:45551066-45568025	0	+	45561794	45568025	789624	5	89,90,120,152,65,	0,10722,15502,15802,16894,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	45551067	45567588	chr1:45551067-45567588	1	+	45561794	45567024	789624	4	88,90,120,720,	0,10721,15501,15801,
#Partially deleted in new
chr1	45566868	45570049	chr1:45566868-45570049	0	+	45566868	45566868	8553170	5	152,196,73,87,159,	0,1113,2058,2274,3022,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	45567548	45570049	chr1:45567548-45570049	0	+	45567548	45567548	8553170	4	629,73,87,159,	0,1378,1594,2342,
#Deleted in new
chr1	45567981	45570049	chr1:45567981-45570049	0	+	45567981	45567981	8553170	4	109,66,87,159,	0,952,1161,1909,
#Deleted in new
chr1	45568146	45570044	chr1:45568146-45570044	0	+	45568146	45568146	8553170	5	31,200,80,87,154,	0,338,780,996,1744,
#Deleted in new
chr1	45568613	45570047	chr1:45568613-45570047	0	+	45568613	45568613	8553170	3	386,87,157,	0,529,1277,
#Deleted in new
chr1	45569049	45570045	chr1:45569049-45570045	0	+	45569049	45569049	8553170	2	180,155,	0,841,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	45580891	45580996	chr1:45580891-45580996	7	-	45580891	45580891	16724991	3	36,33,27,	0,41,78,
#Partially deleted in new
chr1	45583845	45615131	chr1:45583845-45615131	0	+	45584146	45615131	789624	10	67,98,48,111,81,110,80,86,74,119,	0,262,7377,18409,21090,22636,29323,30250,30447,31167,
#Partially deleted in new
chr1	45583987	45618904	chr1:45583987-45618904	1	+	45584146	45618141	789624	13	218,48,110,1017,80,86,74,189,167,57,78,129,844,	0,7235,22494,23333,29181,30108,30305,31025,31317,32349,32638,33475,34073,
#Partially deleted in new
chr1	45584040	45606680	chr1:45584040-45606680	0	+	45584040	45584040	8553170	5	165,48,111,81,199,	0,7182,18214,20895,22441,
#Partially deleted in new
chr1	45584041	45615406	chr1:45584041-45615406	0	+	45584146	45613175	789624	7	164,48,80,86,74,189,102,	0,7181,29127,30054,30251,30971,31263,
#Partially deleted in new
chr1	45584044	45614117	chr1:45584044-45614117	0	+	45584146	45614117	789624	6	161,111,81,110,80,22,	0,18210,20891,22437,29124,30051,
#Partially deleted in new
chr1	45584044	45607533	chr1:45584044-45607533	0	+	45584146	45607533	789624	4	161,48,110,213,	0,7178,22437,23276,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	45584044	45602278	chr1:45584044-45602278	0	+	45584146	45588759	789624	4	161,298,48,24,	0,4606,7178,18210,
#Partially deleted in new
chr1	45584057	45615463	chr1:45584057-45615463	0	+	45584146	45615463	789624	8	148,48,110,80,86,74,189,159,	0,7165,22424,29111,30038,30235,30955,31247,
#Partially deleted in new
chr1	45584059	45618894	chr1:45584059-45618894	1	+	45584146	45618141	789624	15	146,48,111,81,110,1017,80,86,74,189,167,57,78,129,834,	0,7163,18195,20876,22422,23261,29109,30036,30233,30953,31245,32277,32566,33403,34001,
#Partially deleted in new
chr1	45584059	45607664	chr1:45584059-45607664	0	+	45584059	45584059	8553170	6	146,48,111,30,75,344,	0,7163,18195,20876,22457,23261,
#Partially deleted in new
chr1	45584060	45607972	chr1:45584060-45607972	0	+	45584146	45607972	789624	5	145,48,81,110,652,	0,7162,20875,22421,23260,
#Partially deleted in new
chr1	45584062	45618246	chr1:45584062-45618246	1	+	45584146	45618141	789624	13	143,48,111,110,80,86,74,189,167,57,78,129,186,	0,7160,18192,22419,29106,30033,30230,30950,31242,32274,32563,33400,33998,
#Partially deleted in new
chr1	45584064	45618247	chr1:45584064-45618247	3	+	45584146	45618141	789624	14	141,48,111,81,110,80,86,74,189,167,57,78,129,187,	0,7158,18190,20871,22417,29104,30031,30228,30948,31240,32272,32561,33398,33996,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	45609299	45618244	chr1:45609299-45618244	0	+	45609299	45609299	8553170	10	1696,80,86,74,189,167,57,78,129,184,	0,3869,4796,4993,5713,6005,7037,7326,8163,8761,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	45610553	45618244	chr1:45610553-45618244	0	+	45610553	45610553	8553170	9	2695,86,74,189,167,57,78,129,184,	0,3542,3739,4459,4751,5783,6072,6909,7507,
#Partially deleted in new
chr1	45613168	45618213	chr1:45613168-45618213	0	+	45613168	45618141	789624	9	80,86,74,189,167,57,3,129,153,	0,927,1124,1844,2136,3168,3532,4294,4892,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	45614962	45615715	chr1:45614962-45615715	0	+	45614962	45614962	8553170	2	239,411,	0,342,
#Partially deleted in new
chr1	45615058	45618247	chr1:45615058-45618247	0	+	45615058	45618141	789624	5	143,167,57,78,187,	0,246,1278,1567,3002,
#Deleted in new
chr1	45617236	45618246	chr1:45617236-45618246	0	+	45617236	45617236	8553170	2	355,186,	0,824,
#Deleted in new
chr1	45620043	45624001	chr1:45620043-45624001	0	-	45623111	45623909	789624	11	390,111,211,204,98,119,108,119,84,163,266,	0,679,859,1237,1594,1833,2197,2505,2707,2911,3692,
#Deleted in new
chr1	45620043	45624037	chr1:45620043-45624037	0	-	45620043	45620043	8553170	7	390,111,1093,108,119,84,1083,	0,679,859,2197,2505,2707,2911,
#Deleted in new
chr1	45620043	45624040	chr1:45620043-45624040	0	-	45620043	45620043	8553170	11	390,111,211,204,178,119,108,119,84,698,305,	0,679,859,1237,1514,1833,2197,2505,2707,2911,3692,
#Deleted in new
chr1	45620044	45624053	chr1:45620044-45624053	1	-	45620274	45623909	789624	13	389,111,211,204,98,119,108,119,84,163,196,96,318,	0,678,858,1236,1593,1832,2196,2504,2706,2910,3172,3512,3691,
#Deleted in new
chr1	45620110	45624057	chr1:45620110-45624057	3	-	45620274	45623909	789624	13	323,111,211,204,98,119,108,119,84,163,223,96,322,	0,612,792,1170,1527,1766,2130,2438,2640,2844,3106,3446,3625,
#Deleted in new
chr1	45620222	45623967	chr1:45620222-45623967	1	-	45620274	45623909	789624	2	211,232,	0,3513,
#Deleted in new
chr1	45620352	45624057	chr1:45620352-45624057	0	-	45620641	45623909	789624	12	81,306,211,204,98,119,108,119,84,163,223,322,	0,175,550,928,1285,1524,1888,2196,2398,2602,2864,3383,
#Deleted in new
chr1	45620993	45622773	chr1:45620993-45622773	0	-	45620993	45620993	8553170	3	120,119,23,	0,1555,1757,
#Deleted in new
chr1	45622280	45624049	chr1:45622280-45624049	0	-	45622280	45622280	8553170	4	68,119,902,314,	0,268,470,1455,
#Partially deleted in new
chr1	45627303	45686536	chr1:45627303-45686536	1	-	45628255	45659087	789624	12	1105,103,125,159,141,194,73,287,130,115,1042,125,	0,2272,3178,6185,6792,12906,15123,27239,27886,31724,32880,59108,
#Partially deleted in new
chr1	45627303	45635724	chr1:45627303-45635724	0	-	45627303	45627303	8553170	5	1105,103,125,159,1629,	0,2272,3178,6185,6792,
#Partially deleted in new
chr1	45627305	45686630	chr1:45627305-45686630	3	-	45628255	45659087	789624	13	1103,103,125,159,141,194,73,287,130,115,1042,45,219,	0,2270,3176,6183,6790,12904,15121,27237,27884,31722,32878,58270,59106,
#Partially deleted in new
chr1	45627956	45629715	chr1:45627956-45629715	0	-	45627956	45627956	8553170	2	452,140,	0,1619,
#Partially deleted in new
chr1	45628227	45630757	chr1:45628227-45630757	0	-	45628227	45628227	8553170	3	181,103,276,	0,1348,2254,
#Partially deleted in new
chr1	45629587	45633831	chr1:45629587-45633831	0	-	45629587	45629587	8553170	3	91,125,343,	0,894,3901,
#Deleted in new
chr1	45645815	45646197	chr1:45645815-45646197	7	-	45645815	45645815	16724991	1	382,	0,
#Deleted in new
chr1	45651038	45651826	chr1:45651038-45651826	7	-	45651038	45651038	16724991	1	788,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	45654270	45656159	chr1:45654270-45656159	0	-	45654270	45654270	8553170	2	559,970,	0,919,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	45658754	45660389	chr1:45658754-45660389	0	-	45658754	45658754	8553170	2	388,206,	0,1429,
#Partially deleted in new
chr1	45660416	45687133	chr1:45660416-45687133	0	-	45660416	45660416	8553170	3	809,45,141,	0,25159,26576,
#Partially deleted in new
chr1	45660529	45687146	chr1:45660529-45687146	0	-	45660529	45660529	8553170	2	696,154,	0,26463,
#Partially deleted in new
chr1	45660548	45686653	chr1:45660548-45686653	0	-	45660548	45660548	8553170	3	677,45,242,	0,25027,25863,
#Partially deleted in new
chr1	45660676	45688113	chr1:45660676-45688113	0	-	45660676	45660676	8553170	3	549,45,131,	0,24899,27306,
#Partially deleted in new
chr1	45660797	45688113	chr1:45660797-45688113	0	-	45660797	45660797	8553170	2	428,131,	0,27185,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	45687213	45694443	chr1:45687213-45694443	3	+	45691068	45693905	789624	3	1062,137,1240,	0,3760,5990,
#Partially deleted in new
chr1	45688195	45693845	chr1:45688195-45693845	0	+	45688195	45688195	8553170	2	80,642,	0,5008,
#Partially deleted in new
chr1	45694323	45750650	chr1:45694323-45750650	0	-	45694417	45746411	789624	10	192,121,221,123,138,168,156,432,342,54,	0,5746,19922,22571,24879,33307,35290,46577,51796,56273,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	45694683	45697075	chr1:45694683-45697075	3	-	45694683	45694683	8553170	2	284,314,	0,2078,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	45697058	45698055	chr1:45697058-45698055	0	-	45697058	45697058	8553170	2	274,125,	0,872,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	45697058	45714252	chr1:45697058-45714252	0	-	45697058	45697058	8553170	3	274,446,7,	0,2686,17187,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	45698710	45750649	chr1:45698710-45750649	3	-	45699965	45746411	789624	9	1480,221,123,138,168,156,432,342,53,	0,15535,18184,20492,28920,30903,42190,47409,51886,
#Deleted in new
chr1	45781276	45781957	chr1:45781276-45781957	7	+	45781276	45781276	16724991	1	681,	0,
#Partially deleted in new
chr1	45786986	45917509	chr1:45786986-45917509	0	+	45786986	45786986	8553170	5	146,148,143,32,171,	0,37446,42452,95377,130352,
#Partially deleted in new
chr1	45803612	46036124	chr1:45803612-46036124	3	+	45803895	46036066	0	29	460,148,143,32,92,76,79,155,76,210,102,133,62,86,209,139,133,166,102,123,110,155,284,195,227,123,137,194,1587,	0,20820,25826,78751,155773,194111,199192,202628,204683,207117,215983,218337,219297,219620,220159,222064,224118,225155,225853,226218,226516,226994,227394,227778,228565,228983,230189,230460,230925,
#Partially deleted in new
chr1	45846993	45847594	chr1:45846993-45847594	7	-	45846993	45846993	16724991	1	601,	0,
#Partially deleted in new
chr1	45913587	46030759	chr1:45913587-46030759	0	+	45917378	46030759	789624	20	127,195,92,76,79,155,76,210,102,133,62,86,209,139,133,166,102,123,110,153,	0,3751,45798,84136,89217,92653,94708,97142,106008,108362,109322,109645,110184,112089,114143,115180,115878,116243,116541,117019,
#Partially deleted in new
chr1	45959385	46011109	chr1:45959385-46011109	0	+	45959385	45959385	8553170	6	92,76,79,155,76,380,	0,38338,43419,46855,48910,51344,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	46002810	46006595	chr1:46002810-46006595	0	+	46002810	46002810	8553170	2	73,355,	0,3430,
#Partially deleted in new
chr1	46006332	46036121	chr1:46006332-46036121	1	+	46006369	46032710	789624	23	63,76,102,133,62,86,209,139,133,166,102,123,110,155,284,195,84,79,106,14,137,194,1295,	0,1963,13263,15617,16577,16900,17439,19344,21398,22435,23133,23498,23796,24274,24674,25058,25845,25993,26263,26372,27469,27740,28494,
#Deleted in new
chr1	46021964	46024364	chr1:46021964-46024364	0	+	46021964	46021964	8553170	4	118,62,86,593,	0,945,1268,1807,
#Deleted in new
chr1	46022909	46023516	chr1:46022909-46023516	0	+	46022909	46022909	8553170	2	62,284,	0,323,
#Deleted in new
chr1	46029164	46030502	chr1:46029164-46030502	0	+	46029164	46029164	8553170	3	403,123,374,	0,666,964,
#Deleted in new
chr1	46033867	46034420	chr1:46033867-46034420	0	+	46033867	46033867	8553170	2	71,348,	0,205,
#Partially deleted in new
chr1	46040139	46132642	chr1:46040139-46132642	1	-	46043672	46131952	789624	10	3732,171,75,177,143,126,181,99,109,796,	0,5778,6411,15655,21789,25914,26771,37375,40502,91707,
#Partially deleted in new
chr1	46040139	46132794	chr1:46040139-46132794	1	-	46043672	46131952	789624	11	3732,171,75,177,143,126,181,99,109,110,96,	0,5778,6411,15655,21789,25914,26771,37375,40502,91707,92559,
#Partially deleted in new
chr1	46040141	46133036	chr1:46040141-46133036	3	-	46043672	46131952	789624	11	3730,171,75,177,143,126,181,99,109,110,253,	0,5776,6409,15653,21787,25912,26769,37373,40500,91705,92642,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	46042640	46057434	chr1:46042640-46057434	0	-	46042640	46042640	8553170	4	1231,171,75,1640,	0,3277,3910,13154,
#Partially deleted in new
chr1	46043660	46176488	chr1:46043660-46176488	3	-	46043672	46176471	789624	10	211,171,75,177,143,126,181,99,109,261,	0,2257,2890,12134,18268,22393,23250,33854,36981,132567,
#Partially deleted in new
chr1	46043661	46132616	chr1:46043661-46132616	1	-	46043672	46131952	789624	9	210,171,75,143,126,181,99,109,770,	0,2256,2889,18267,22392,23249,33853,36980,88185,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	46046817	46048368	chr1:46046817-46048368	3	+	46046817	46046817	8553170	2	358,291,	0,1260,
#Partially deleted in new
chr1	46061949	46132911	chr1:46061949-46132911	0	-	46061949	46061949	8553170	6	122,126,181,99,109,128,	0,4104,4961,15565,18692,70834,
#Partially deleted in new
chr1	46066055	46132913	chr1:46066055-46132913	0	-	46066055	46131952	789624	6	124,181,99,109,110,130,	0,855,11459,14586,65791,66728,
#Deleted in new
chr1	46104949	46105175	chr1:46104949-46105175	7	+	46104949	46104949	16724991	1	226,	0,
#Partially deleted in new
chr1	46134530	46139081	chr1:46134530-46139081	3	+	46134530	46134530	789624	2	124,215,	0,4336,
#Partially deleted in new
chr1	46175072	46185298	chr1:46175072-46185298	0	+	46175072	46175072	8553170	7	337,133,65,207,99,156,74,	0,5453,6027,9118,9712,9887,10152,
#Partially deleted in new
chr1	46175086	46185958	chr1:46175086-46185958	3	+	46181107	46185533	789624	9	323,133,65,207,75,99,156,84,473,	0,5439,6013,9104,9507,9698,9873,10138,10399,
#Partially deleted in new
chr1	46175103	46184663	chr1:46175103-46184663	0	+	46175103	46175103	8553170	3	306,65,473,	0,5996,9087,
#Partially deleted in new
chr1	46175116	46184666	chr1:46175116-46184666	0	+	46175116	46175116	8553170	6	293,119,133,65,207,73,	0,612,5409,5983,9074,9477,
#Partially deleted in new
chr1	46175265	46185572	chr1:46175265-46185572	0	+	46175265	46175265	8553170	8	144,65,207,75,99,156,84,87,	0,5834,8925,9328,9519,9694,9959,10220,
#Partially deleted in new
chr1	46175485	46176478	chr1:46175485-46176478	3	-	46175585	46176471	789624	2	144,251,	0,742,
#Deleted in new
chr1	46183432	46185308	chr1:46183432-46185308	0	+	46183432	46183432	8553170	6	251,207,75,99,156,84,	0,758,1161,1352,1527,1792,
#Deleted in new
chr1	46183432	46184882	chr1:46183432-46184882	0	+	46183432	46183432	8553170	3	251,478,98,	0,758,1352,
#Deleted in new
chr1	46183891	46185002	chr1:46183891-46185002	0	+	46183891	46183891	8553170	5	95,207,75,99,43,	0,299,702,893,1068,
#Deleted in new
chr1	46184866	46185742	chr1:46184866-46185742	0	+	46184866	46184866	8553170	3	249,84,257,	0,358,619,
#Partially deleted in new
chr1	46188681	46220291	chr1:46188681-46220291	1	-	46194582	46197821	789624	19	676,110,136,45,65,126,129,73,59,42,621,128,99,114,66,119,115,170,587,	0,776,1172,1791,2038,3416,3626,3836,4218,4492,4623,5592,5871,7129,7330,8049,8288,9020,31023,
#Partially deleted in new
chr1	46188682	46198443	chr1:46188682-46198443	3	-	46189269	46197821	0	22	675,110,136,45,65,126,129,73,59,42,84,76,71,128,99,118,114,66,119,115,170,108,	0,775,1171,1790,2037,3415,3625,3835,4217,4491,4622,4881,5172,5591,5870,6161,7128,7329,8048,8287,9019,9653,
#Partially deleted in new
chr1	46188682	46220305	chr1:46188682-46220305	1	-	46188718	46197821	0	23	298,116,84,136,45,65,126,129,73,59,42,84,76,71,128,99,118,114,66,119,115,170,601,	0,559,801,1171,1790,2037,3415,3625,3835,4217,4491,4622,4881,5172,5591,5870,6161,7128,7329,8048,8287,9019,31022,
#Deleted in new
chr1	46188683	46189567	chr1:46188683-46189567	0	-	46188683	46188683	8553170	2	297,110,	0,774,
#Partially deleted in new
chr1	46189518	46190972	chr1:46189518-46190972	0	-	46189518	46189518	8553170	4	49,136,45,253,	0,335,954,1201,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	46190116	46193800	chr1:46190116-46193800	0	-	46190116	46190116	8553170	6	2107,129,73,59,42,496,	0,2191,2401,2783,3057,3188,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	46191615	46192341	chr1:46191615-46192341	0	-	46191615	46191615	8553170	2	608,34,	0,692,
#Deleted in new
chr1	46193382	46194651	chr1:46193382-46194651	0	-	46193382	46193382	8553170	3	543,128,99,	0,891,1170,
#Deleted in new
chr1	46194581	46198360	chr1:46194581-46198360	0	-	46194581	46194581	8553170	8	70,118,114,66,119,115,170,74,	0,262,1229,1430,2149,2388,3120,3705,
#Deleted in new
chr1	46195483	46198102	chr1:46195483-46198102	0	-	46195483	46195483	8553170	5	441,66,71,115,401,	0,528,1295,1486,2218,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	46203333	46221261	chr1:46203333-46221261	3	+	46203426	46220220	789624	2	291,1563,	0,16365,
#Partially deleted in new
chr1	46247687	46261358	chr1:46247687-46261358	0	+	46261268	46261358	789624	7	59,87,120,61,136,157,98,	0,824,2312,10998,12276,13171,13573,
#Partially deleted in new
chr1	46247694	46278473	chr1:46247694-46278473	3	+	46248405	46278282	789624	19	52,65,87,120,61,136,70,289,125,151,127,75,131,111,124,79,180,164,402,	0,649,817,2305,10991,12269,12847,13032,13566,19764,22964,24771,24977,25660,25929,26443,26843,30122,30377,
#Partially deleted in new
chr1	46247699	46261015	chr1:46247699-46261015	0	+	46260789	46261015	789624	7	47,87,120,61,136,70,289,	0,812,2300,10986,12264,12842,13027,
#Partially deleted in new
chr1	46247731	46278472	chr1:46247731-46278472	1	+	46248405	46278282	789624	18	677,87,120,61,136,70,289,125,151,127,75,131,111,124,79,180,164,401,	0,780,2268,10954,12232,12810,12995,13529,19727,22927,24734,24940,25623,25892,26406,26806,30085,30340,
#Partially deleted in new
chr1	46247768	46260857	chr1:46247768-46260857	0	+	46248405	46260857	789624	8	33,10,87,120,61,136,70,131,	0,630,743,2231,10917,12195,12773,12958,
#Partially deleted in new
chr1	46248511	46267584	chr1:46248511-46267584	0	+	46248511	46248511	8553170	5	87,120,61,128,76,	0,1488,10174,11452,18997,
#Partially deleted in new
chr1	46248511	46261015	chr1:46248511-46261015	0	+	46260789	46261015	789624	5	87,120,61,70,289,	0,1488,10174,12030,12215,
#Partially deleted in new
chr1	46259963	46267608	chr1:46259963-46267608	0	+	46259963	46267608	789624	5	136,70,289,122,150,	0,578,763,1300,7495,
#Partially deleted in new
chr1	46260847	46272800	chr1:46260847-46272800	0	+	46260847	46261029	789624	6	227,125,151,127,75,129,	0,413,6611,9811,11618,11824,
#Partially deleted in new
chr1	46261195	46281161	chr1:46261195-46281161	0	-	46261403	46281161	789624	7	209,183,76,123,99,165,37,	0,6299,17986,18296,18996,19200,19929,
#Partially deleted in new
chr1	46261337	46273681	chr1:46261337-46273681	0	+	46261337	46272473	789624	6	48,151,75,131,111,58,	0,6121,11128,11334,12017,12286,
#Partially deleted in new
chr1	46272465	46278439	chr1:46272465-46278439	0	+	46272465	46278282	789624	7	75,131,124,79,180,164,368,	0,206,1158,1672,2072,5351,5606,
#Partially deleted in new
chr1	46272504	46278145	chr1:46272504-46278145	0	+	46272504	46274196	789624	7	36,131,111,79,180,164,74,	0,167,850,1633,2033,5312,5567,
#Partially deleted in new
chr1	46277461	46303608	chr1:46277461-46303608	3	-	46278864	46303322	789624	10	1623,76,123,99,165,261,1138,71,87,485,	0,1720,2030,2730,2934,3663,7900,20101,20822,25662,
#Partially deleted in new
chr1	46278400	46303366	chr1:46278400-46303366	1	-	46278864	46303322	789624	10	684,76,123,99,165,261,1138,71,87,243,	0,781,1091,1791,1995,2724,6961,19162,19883,24723,
#Partially deleted in new
chr1	46278400	46286112	chr1:46278400-46286112	1	-	46278704	46286112	789624	8	505,178,76,123,99,165,261,751,	0,506,781,1091,1791,1995,2724,6961,
#Partially deleted in new
chr1	46278402	46303263	chr1:46278402-46303263	1	-	46278864	46303256	789624	10	682,76,123,99,165,261,1138,71,87,140,	0,779,1089,1789,1993,2722,6959,19160,19881,24721,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	46278403	46299890	chr1:46278403-46299890	0	-	46279441	46297589	789624	8	681,433,99,165,261,1138,71,1607,	0,778,1788,1992,2721,6958,19159,19880,
#Partially deleted in new
chr1	46284166	46303274	chr1:46284166-46303274	0	-	46285224	46303256	789624	5	264,1495,71,87,151,	0,838,13396,14117,18957,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	46296741	46300780	chr1:46296741-46300780	0	-	46296741	46296741	8553170	2	892,2497,	0,1542,
#Partially deleted in new
chr1	46303630	46316776	chr1:46303630-46316776	3	+	46303766	46316584	0	4	190,27,162,225,	0,5470,6524,12921,
#Partially deleted in new
chr1	46303697	46316776	chr1:46303697-46316776	0	+	46303766	46310234	789624	4	123,43,162,225,	0,5403,6457,12854,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	46303706	46309673	chr1:46303706-46309673	0	+	46303706	46303706	8553170	2	114,573,	0,5394,
#Partially deleted in new
chr1	46303708	46316776	chr1:46303708-46316776	0	+	46303766	46310234	789624	5	112,27,148,162,225,	0,5392,6188,6446,12843,
#Partially deleted in new
chr1	46309920	46316776	chr1:46309920-46316776	0	+	46309920	46309920	8553170	2	396,225,	0,6631,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	46340176	46362191	chr1:46340176-46362191	3	+	46340826	46361846	0	6	743,344,155,161,125,622,	0,4624,6744,12691,20527,21393,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	46340788	46365152	chr1:46340788-46365152	0	+	46340826	46352886	789624	5	131,344,161,125,3583,	0,4012,12079,19915,20781,
#Partially deleted in new
chr1	46340801	46360828	chr1:46340801-46360828	0	+	46340826	46344853	789624	5	118,363,155,161,125,	0,3980,6119,12066,19902,
#Partially deleted in new
chr1	46340819	46352958	chr1:46340819-46352958	0	+	46340826	46344853	789624	5	100,175,344,155,91,	0,503,3981,6101,12048,
#Deleted in new
chr1	46340828	46341595	chr1:46340828-46341595	0	+	46340828	46340828	8553170	2	91,273,	0,494,
#Partially deleted in new
chr1	46341186	46362192	chr1:46341186-46362192	1	+	46344854	46361846	0	6	679,344,155,161,125,623,	0,3614,5734,11681,19517,20383,
#Partially deleted in new
chr1	46341835	46362192	chr1:46341835-46362192	1	+	46341843	46343802	789624	6	2459,344,155,161,125,623,	0,2965,5085,11032,18868,19734,
#Partially deleted in new
chr1	46343392	46362190	chr1:46343392-46362190	0	+	46343392	46343802	789624	6	902,162,155,161,125,621,	0,1408,3528,9475,17311,18177,
#Deleted in new
chr1	46344011	46345374	chr1:46344011-46345374	0	+	46344011	46344011	8553170	2	283,574,	0,789,
#Partially deleted in new
chr1	46370585	46370955	chr1:46370585-46370955	7	+	46370585	46370585	16724991	1	370,	0,
#Partially deleted in new
chr1	46394264	46413845	chr1:46394264-46413845	3	+	46394348	46413575	789624	15	279,114,135,134,207,41,125,126,98,100,41,40,109,146,399,	0,7826,10749,11107,11323,11773,11979,14194,14836,16133,16549,17347,17878,18810,19182,
#Partially deleted in new
chr1	46394328	46405789	chr1:46394328-46405789	0	+	46394328	46394328	8553170	5	215,114,135,134,171,	0,7762,10685,11043,11290,
#Partially deleted in new
chr1	46394370	46409198	chr1:46394370-46409198	0	+	46394370	46394370	8553170	8	173,114,135,134,491,125,126,98,	0,7720,10643,11001,11217,11873,14088,14730,
#Partially deleted in new
chr1	46405722	46413848	chr1:46405722-46413848	0	+	46405722	46408534	789624	8	72,126,98,100,41,109,98,402,	0,2736,3378,4675,5091,6420,7400,7724,
#Partially deleted in new
chr1	46406037	46409288	chr1:46406037-46409288	0	+	46406037	46406037	8553170	4	41,125,126,188,	0,206,2421,3063,
#Deleted in new
chr1	46410051	46411651	chr1:46410051-46411651	0	+	46410051	46410051	8553170	3	446,41,40,	0,762,1560,
#Partially deleted in new
chr1	46432128	46445321	chr1:46432128-46445321	5	+	46432128	46432128	16724991	12	114,121,76,214,130,112,82,16,40,106,121,106,	0,361,895,1609,3778,5251,6136,6538,8533,8968,10771,13087,
#Partially deleted in new
chr1	46433826	46436453	chr1:46433826-46436453	4	+	46433826	46433826	16724991	4	121,42,125,330,	0,1380,2085,2297,
#Partially deleted in new
chr1	46435932	46441202	chr1:46435932-46441202	4	+	46435932	46435932	16724991	4	104,125,40,109,	0,191,4733,5161,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	46436144	46445521	chr1:46436144-46445521	4	+	46436144	46436144	16724991	6	104,55,40,109,146,323,	0,3378,4521,4949,6747,9054,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	46442861	46482493	chr1:46442861-46482493	7	+	46442861	46442861	16724991	4	176,91,157,284,	0,12958,34486,39348,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	46442923	46482493	chr1:46442923-46482493	5	+	46442923	46442923	16724991	2	114,284,	0,39286,
#Partially deleted in new
chr1	46446672	46449704	chr1:46446672-46449704	0	-	46446672	46446672	789624	3	473,438,218,	0,779,2814,
#Partially deleted in new
chr1	46446672	46451281	chr1:46446672-46451281	3	-	46446672	46446672	8553170	4	473,438,112,269,	0,779,2814,4340,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	46455822	46482475	chr1:46455822-46482475	4	+	46455822	46455822	16724991	2	88,266,	0,26387,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	46506995	46514212	chr1:46506995-46514212	1	+	46507010	46512494	789624	4	169,194,349,2170,	0,3465,3939,5047,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	46506996	46514226	chr1:46506996-46514226	3	+	46507010	46512494	789624	4	168,179,349,2184,	0,3479,3938,5046,
#Partially deleted in new
chr1	46532165	46543969	chr1:46532165-46543969	3	-	46532993	46533527	789624	2	1485,148,	0,11656,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	46538695	46570255	chr1:46538695-46570255	3	+	46538695	46538695	789624	8	99,80,75,118,142,65,92,1774,	0,2234,4998,19529,20974,24816,29510,29786,
#Partially deleted in new
chr1	46545643	46550012	chr1:46545643-46550012	0	-	46545643	46545643	8553170	3	2166,75,79,	0,3549,4290,
#Partially deleted in new
chr1	46547348	46549733	chr1:46547348-46549733	0	-	46547348	46547348	8553170	3	461,75,27,	0,1844,2358,
#Partially deleted in new
chr1	46547379	46551527	chr1:46547379-46551527	3	-	46547729	46551215	789624	4	430,75,69,463,	0,1813,2554,3685,
#Partially deleted in new
chr1	46547427	46551215	chr1:46547427-46551215	1	-	46547729	46551215	789624	3	382,75,151,	0,1765,3637,
#Partially deleted in new
chr1	46557407	46604294	chr1:46557407-46604294	1	-	46558574	46580552	789624	12	1393,44,165,195,96,56,105,80,98,102,168,110,	0,2826,4070,5241,7633,11035,14655,19167,23122,25820,36705,46777,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	46557407	46604294	chr1:46557407-46604294	1	-	46558574	46594146	789624	14	1393,44,165,195,96,56,123,105,74,80,98,102,168,110,	0,2826,4070,5241,7633,11035,14009,14655,17539,19167,23122,25820,36705,46777,
#Partially deleted in new
chr1	46557407	46604294	chr1:46557407-46604294	1	-	46558761	46594146	789624	12	1393,165,195,96,56,105,74,80,98,102,168,68,	0,4070,5241,7633,11035,14655,17539,19167,23122,25820,36705,46819,
#Partially deleted in new
chr1	46557407	46604294	chr1:46557407-46604294	1	-	46558574	46594146	789624	13	1393,44,165,195,96,56,105,74,80,98,102,168,110,	0,2826,4070,5241,7633,11035,14655,17539,19167,23122,25820,36705,46777,
#Partially deleted in new
chr1	46557417	46585971	chr1:46557417-46585971	0	-	46557417	46557417	8553170	11	1383,44,165,195,96,56,105,80,98,102,98,	0,2816,4060,5231,7623,11025,14645,19157,23112,25810,28456,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	46557417	46604214	chr1:46557417-46604214	1	-	46558574	46583327	0	14	1383,44,165,195,96,56,123,105,74,80,98,102,168,30,	0,2816,4060,5231,7623,11025,13999,14645,17529,19157,23112,25810,36695,46767,
#Partially deleted in new
chr1	46557418	46604237	chr1:46557418-46604237	3	-	46558574	46583327	0	13	1382,44,165,195,96,56,105,74,80,98,102,168,53,	0,2815,4059,5230,7622,11024,14644,17528,19156,23111,25809,36694,46766,
#Partially deleted in new
chr1	46558232	46565063	chr1:46558232-46565063	0	-	46558761	46565063	789624	3	568,195,23,	0,4416,6808,
#Partially deleted in new
chr1	46558392	46604268	chr1:46558392-46604268	0	-	46572124	46594146	789624	11	408,165,195,96,56,105,80,98,102,168,84,	0,3085,4256,6648,10050,13670,18182,22137,24835,35720,45792,
#Partially deleted in new
chr1	46558698	46604255	chr1:46558698-46604255	1	-	46558761	46583327	0	12	102,165,195,96,56,105,74,80,98,102,168,29,	0,2779,3950,6342,9744,13364,16248,17876,21831,24529,35414,45528,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	46558755	46572300	chr1:46558755-46572300	0	-	46558755	46558755	8553170	6	45,165,195,96,56,238,	0,2722,3893,6285,9687,13307,
#Partially deleted in new
chr1	46561476	46563035	chr1:46561476-46563035	0	-	46561476	46561476	8553170	2	166,387,	0,1172,
#Partially deleted in new
chr1	46561481	46604279	chr1:46561481-46604279	0	-	46576619	46594146	789624	10	192,195,96,56,105,74,80,102,168,53,	0,1167,3559,6961,10581,13465,15093,21746,32631,42745,
#Partially deleted in new
chr1	46561571	46568437	chr1:46561571-46568437	0	-	46561571	46561571	8553170	4	71,195,96,200,	0,1077,3469,6666,
#Partially deleted in new
chr1	46562698	46565426	chr1:46562698-46565426	0	-	46562698	46562698	8553170	2	145,386,	0,2342,
#Partially deleted in new
chr1	46562748	46568462	chr1:46562748-46568462	0	-	46562748	46562748	8553170	3	95,96,146,	0,2292,5568,
#Partially deleted in new
chr1	46568442	46585560	chr1:46568442-46585560	0	-	46568442	46568442	8553170	7	56,105,74,80,98,102,65,	0,3620,6504,8132,12087,14785,17053,
#Partially deleted in new
chr1	46568455	46604294	chr1:46568455-46604294	0	-	46568455	46583327	789624	8	43,105,74,80,98,102,168,68,	0,3607,6491,8119,12074,14772,25657,35771,
#Partially deleted in new
chr1	46572108	46586259	chr1:46572108-46586259	0	-	46572108	46572108	8553170	7	59,74,80,98,102,101,26,	0,2838,4466,8421,11119,13765,14125,
#Partially deleted in new
chr1	46572157	46604224	chr1:46572157-46604224	0	-	46582876	46594146	789624	8	10,74,80,98,110,102,168,40,	0,2789,4417,8372,10656,11070,21955,32027,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	46573733	46594206	chr1:46573733-46594206	0	-	46573733	46573733	8553170	6	2921,98,92,102,101,94,	0,6796,9080,9494,12140,20379,
#Partially deleted in new
chr1	46574825	46594231	chr1:46574825-46594231	0	-	46574825	46574825	8553170	5	195,80,98,102,119,	0,1749,5704,8402,19287,
#Partially deleted in new
chr1	46576267	46585935	chr1:46576267-46585935	0	-	46576267	46576267	8553170	4	387,98,102,62,	0,4262,6960,9606,
#Partially deleted in new
chr1	46576583	46604255	chr1:46576583-46604255	0	-	46576583	46583327	789624	5	71,98,102,168,91,	0,3946,6644,17529,27581,
#Partially deleted in new
chr1	46576588	46616843	chr1:46576588-46616843	0	-	46576588	46583327	789624	5	66,98,102,168,133,	0,3941,6639,17524,40122,
#Partially deleted in new
chr1	46580433	46594280	chr1:46580433-46594280	1	-	46580487	46583327	789624	3	194,102,168,	0,2794,13679,
#Partially deleted in new
chr1	46580439	46594261	chr1:46580439-46594261	0	-	46585894	46594146	789624	4	188,102,101,149,	0,2788,5434,13673,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	46580595	46595059	chr1:46580595-46595059	0	-	46580595	46594943	789624	4	32,102,168,192,	0,2632,13517,14272,
#Partially deleted in new
chr1	46584503	46586269	chr1:46584503-46586269	0	-	46584503	46584503	8553170	2	300,396,	0,1370,
#Partially deleted in new
chr1	46584546	46604246	chr1:46584546-46604246	0	-	46584546	46584546	8553170	4	257,101,168,62,	0,1327,9566,19638,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	46593522	46604270	chr1:46593522-46604270	0	-	46593522	46593522	8553170	3	330,168,86,	0,590,10662,
#Partially deleted in new
chr1	46607714	46616891	chr1:46607714-46616891	3	-	46609654	46613321	789624	4	1970,203,468,181,	0,2287,5189,8996,
#Partially deleted in new
chr1	46607718	46615133	chr1:46607718-46615133	1	-	46609654	46615076	789624	4	1966,203,468,163,	0,2283,5185,7252,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	46607724	46616465	chr1:46607724-46616465	1	-	46609654	46613321	789624	3	1960,203,3562,	0,2277,5179,
#Partially deleted in new
chr1	46610001	46616884	chr1:46610001-46616884	0	-	46610001	46610001	8553170	3	203,468,174,	0,2902,6709,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	46632736	46668454	chr1:46632736-46668454	3	-	46635775	46668391	789624	9	3234,108,96,48,51,63,51,109,398,	0,10457,12424,19844,21080,25390,25950,32519,35320,
#Partially deleted in new
chr1	46633677	46645256	chr1:46633677-46645256	0	-	46633764	46645256	789624	4	151,74,108,96,	0,2219,9516,11483,
#Partially deleted in new
chr1	46635040	46668427	chr1:46635040-46668427	1	-	46635775	46668391	789624	9	930,108,96,48,51,63,51,109,371,	0,8153,10120,17540,18776,23086,23646,30215,33016,
#Partially deleted in new
chr1	46635040	46665878	chr1:46635040-46665878	1	-	46635775	46658162	789624	10	930,108,96,48,51,63,51,91,109,232,	0,8153,10120,17540,18776,23086,23646,28792,30215,30606,
#Partially deleted in new
chr1	46635044	46668364	chr1:46635044-46668364	1	-	46635775	46668322	789624	9	926,108,96,48,51,63,51,109,308,	0,8149,10116,17536,18772,23082,23642,30211,33012,
#Partially deleted in new
chr1	46635078	46665372	chr1:46635078-46665372	0	-	46635775	46665372	789624	6	892,48,51,63,51,117,	0,17502,18738,23048,23608,30177,
#Partially deleted in new
chr1	46635325	46665855	chr1:46635325-46665855	0	-	46663896	46665648	789624	10	645,108,96,48,51,63,51,91,109,209,	0,7868,9835,17255,18491,22801,23361,28507,29930,30321,
#Partially deleted in new
chr1	46635422	46668427	chr1:46635422-46668427	1	-	46635775	46668391	789624	7	548,48,51,63,51,109,371,	0,17158,18394,22704,23264,29833,32634,
#Partially deleted in new
chr1	46635633	46658727	chr1:46635633-46658727	0	-	46635775	46658727	789624	6	337,108,96,48,63,41,	0,7560,9527,16947,22493,23053,
#Partially deleted in new
chr1	46635707	46665855	chr1:46635707-46665855	1	-	46635775	46665648	789624	9	263,108,96,48,51,63,51,109,209,	0,7486,9453,16873,18109,22419,22979,29548,29939,
#Partially deleted in new
chr1	46652420	46668109	chr1:46652420-46668109	0	-	46652420	46652420	8553170	6	208,51,63,51,109,53,	0,1396,5706,6266,12835,15636,
#Partially deleted in new
chr1	46652603	46668179	chr1:46652603-46668179	0	-	46663896	46668179	789624	7	25,51,63,51,91,109,123,	0,1213,5523,6083,11229,12652,15453,
#Partially deleted in new
chr1	46658703	46673867	chr1:46658703-46673867	0	-	46658703	46658703	8553170	4	34,91,109,314,	0,5129,6552,14850,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	46664541	46668102	chr1:46664541-46668102	0	-	46664541	46664541	8553170	2	823,46,	0,3515,
#Deleted in new
chr1	46665909	46666375	chr1:46665909-46666375	7	-	46665909	46665909	16724991	1	466,	0,
#Partially deleted in new
chr1	46668854	46673251	chr1:46668854-46673251	0	+	46669438	46673251	789624	2	624,379,	0,4018,
#Partially deleted in new
chr1	46671827	46673594	chr1:46671827-46673594	3	+	46671934	46673456	789624	2	144,722,	0,1045,
#Partially deleted in new
chr1	46671858	46673476	chr1:46671858-46673476	1	+	46673063	46673456	789624	2	113,453,	0,1165,
#Partially deleted in new
chr1	46671877	46673494	chr1:46671877-46673494	1	+	46672997	46673456	789624	2	94,543,	0,1074,
#Partially deleted in new
chr1	46674035	46692098	chr1:46674035-46692098	0	+	46674035	46674035	789624	3	184,91,225,	0,12637,17838,
#Partially deleted in new
chr1	46674127	46692097	chr1:46674127-46692097	3	+	46674127	46674127	789624	4	92,84,91,224,	0,8053,12545,17746,
#Partially deleted in new
chr1	46675158	46719064	chr1:46675158-46719064	3	-	46678460	46718087	789624	11	3478,126,112,87,192,105,111,99,146,149,1162,	0,8141,9332,11625,13194,14428,16668,21392,32747,41136,42744,
#Partially deleted in new
chr1	46678262	46689691	chr1:46678262-46689691	0	-	46678262	46678262	8553170	5	374,126,112,87,105,	0,5037,6228,8521,11324,
#Partially deleted in new
chr1	46678289	46689636	chr1:46678289-46689636	0	-	46684601	46689636	789624	6	347,126,112,62,87,50,	0,5010,6201,6793,8494,11297,
#Partially deleted in new
chr1	46678406	46686929	chr1:46678406-46686929	0	-	46678406	46678406	8553170	4	230,126,112,146,	0,4893,6084,8377,
#Deleted in new
chr1	46683221	46684564	chr1:46683221-46684564	0	-	46683221	46683221	8553170	2	204,74,	0,1269,
#Partially deleted in new
chr1	46684171	46696596	chr1:46684171-46696596	0	-	46684171	46684171	8553170	6	431,87,192,105,111,46,	0,2612,4181,5415,7655,12379,
#Deleted in new
chr1	46742328	46743133	chr1:46742328-46743133	7	+	46742328	46742328	16724991	1	805,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	46757837	46810850	chr1:46757837-46810850	0	+	46757837	46757837	8553170	6	95,124,159,120,40,43,	0,7140,7847,9687,14194,52970,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	46757877	46790499	chr1:46757877-46790499	0	+	46757877	46757877	8553170	5	55,124,159,120,96,	0,7100,7807,9647,32526,
#Partially deleted in new
chr1	46798997	46818670	chr1:46798997-46818670	0	+	46799081	46812579	789624	10	264,128,125,152,107,191,134,65,83,40,	0,13498,14484,14914,15211,16076,18050,18967,19133,19633,
#Partially deleted in new
chr1	46798997	46814759	chr1:46798997-46814759	1	+	46799081	46814759	789624	8	264,142,45,128,125,152,107,6,	0,11810,12142,13498,14484,14914,15211,15756,
#Partially deleted in new
chr1	46799045	46819413	chr1:46799045-46819413	3	+	46799081	46818814	789624	12	216,142,45,128,125,152,107,191,134,65,83,783,	0,11762,12094,13450,14436,14866,15163,16028,18002,18919,19085,19585,
#Partially deleted in new
chr1	46799045	46819349	chr1:46799045-46819349	1	+	46799081	46818814	789624	12	216,142,45,128,125,155,107,191,134,65,83,719,	0,11762,12094,13450,14436,14863,15163,16028,18002,18919,19085,19585,
#Partially deleted in new
chr1	46799050	46815411	chr1:46799050-46815411	0	+	46799081	46812271	789624	8	211,142,172,128,125,152,107,338,	0,11757,13126,13445,14431,14861,15158,16023,
#Partially deleted in new
chr1	46799063	46819349	chr1:46799063-46819349	0	+	46799081	46815242	789624	12	198,142,45,128,125,82,107,191,134,65,83,719,	0,11744,12076,13432,14418,14918,15145,16010,17984,18901,19067,19567,
#Partially deleted in new
chr1	46799081	46818814	chr1:46799081-46818814	1	+	46799081	46818814	789624	11	180,142,128,125,155,107,191,134,65,83,184,	0,11726,13414,14400,14827,15127,15992,17966,18883,19049,19549,
#Partially deleted in new
chr1	46799081	46818814	chr1:46799081-46818814	1	+	46799081	46815084	789624	13	180,142,45,128,125,152,107,3,186,134,65,83,184,	0,11726,12058,13414,14400,14830,15127,15991,15997,17966,18883,19049,19549,
#Partially deleted in new
chr1	46806806	46813988	chr1:46806806-46813988	0	+	46812617	46813988	789624	6	41,142,45,128,125,80,	0,4001,4333,5689,6675,7102,
#Partially deleted in new
chr1	46811072	46818842	chr1:46811072-46818842	0	+	46811072	46811072	8553170	10	112,128,125,155,107,191,134,65,83,212,	0,1423,2409,2836,3136,4001,5975,6892,7058,7558,
#Deleted in new
chr1	46811102	46817181	chr1:46811102-46817181	0	+	46811102	46811102	8553170	7	82,128,125,152,107,191,134,	0,1393,2379,2809,3106,3971,5945,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	46815073	46817357	chr1:46815073-46817357	0	+	46815073	46815073	8553170	2	191,310,	0,1974,
#Partially deleted in new
chr1	46817047	46819015	chr1:46817047-46819015	0	+	46817047	46817047	8553170	2	134,385,	0,1583,
#Partially deleted in new
chr1	46843094	46900437	chr1:46843094-46900437	7	-	46843094	46843094	16724991	12	84,83,65,134,191,104,155,125,128,45,142,180,	0,1437,2569,16559,24852,30149,39843,40077,42361,44156,55748,57163,
#Partially deleted in new
chr1	46843177	46900434	chr1:46843177-46900434	5	-	46843177	46843177	16724991	12	163,83,65,134,191,104,155,125,128,45,142,177,	0,1354,2486,16476,24769,30066,39760,39994,42278,44073,55665,57080,
#Deleted in new
chr1	46891638	46892830	chr1:46891638-46892830	7	+	46891638	46891638	16724991	1	1192,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	46929176	46941465	chr1:46929176-46941465	3	-	46930114	46941433	789624	12	1134,77,65,134,191,107,155,125,128,45,142,227,	0,3584,3806,4769,4999,5276,5823,6346,7487,8125,8819,12062,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	46929176	46941484	chr1:46929176-46941484	0	-	46934026	46941433	789624	9	1134,77,134,107,125,128,45,142,246,	0,3584,4769,5276,6346,7487,8125,8819,12062,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	46929179	46941456	chr1:46929179-46941456	1	-	46930114	46941433	789624	13	100,270,77,65,134,191,109,156,125,128,45,142,218,	0,861,3581,3803,4766,4996,5273,5819,6343,7484,8122,8816,12059,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	46929636	46941464	chr1:46929636-46941464	1	-	46930114	46941433	789624	10	674,77,65,186,107,125,128,45,142,226,	0,3124,3346,4309,4816,5886,7027,7665,8359,11602,
#Partially deleted in new
chr1	46930047	46941484	chr1:46930047-46941484	0	-	46932829	46941433	789624	11	263,77,134,191,107,59,125,128,45,142,246,	0,2713,3898,4128,4405,4952,5475,6616,7254,7948,11191,
#Partially deleted in new
chr1	46930047	46941484	chr1:46930047-46941484	0	-	46932829	46941433	789624	8	263,77,107,125,128,45,142,246,	0,2713,4405,5475,6616,7254,7948,11191,
#Partially deleted in new
chr1	46931505	46941476	chr1:46931505-46941476	0	-	46933965	46941433	789624	8	1332,65,60,98,128,45,142,238,	0,1477,2440,4044,5158,5796,6490,9733,
#Partially deleted in new
chr1	46932430	46941464	chr1:46932430-46941464	1	-	46932756	46941433	789624	11	407,65,134,191,107,155,125,128,45,142,226,	0,552,1515,1745,2022,2569,3092,4233,4871,5565,8808,
#Deleted in new
chr1	46933914	46934246	chr1:46933914-46934246	0	-	46933914	46933914	8553170	2	165,71,	0,261,
#Deleted in new
chr1	46967678	46967874	chr1:46967678-46967874	7	-	46967678	46967678	16724991	1	196,	0,
#Deleted in new
chr1	46994381	46994502	chr1:46994381-46994502	7	-	46994381	46994381	16724991	1	121,	0,
#Deleted in new
chr1	47000897	47001087	chr1:47000897-47001087	7	-	47000897	47000897	16724991	1	190,	0,
#Deleted in new
chr1	47002994	47003148	chr1:47002994-47003148	7	-	47002994	47002994	16724991	1	154,	0,
#Partially deleted in new
chr1	47023567	47050751	chr1:47023567-47050751	3	+	47023817	47050174	789624	12	427,142,45,128,128,155,107,191,134,65,83,752,	0,6422,7868,9673,12238,12449,15092,15774,22899,24997,25854,26432,
#Partially deleted in new
chr1	47036107	47039723	chr1:47036107-47039723	0	+	47036107	47036107	8553170	3	64,107,382,	0,2552,3234,
#Partially deleted in new
chr1	47067487	47118319	chr1:47067487-47118319	3	+	47067490	47117934	789624	12	180,142,45,128,125,155,104,191,134,65,83,554,	0,1134,13135,14846,17132,17336,27078,31606,38640,48041,49162,50278,
#Deleted in new
chr1	47074777	47075979	chr1:47074777-47075979	7	-	47074777	47074777	16724991	1	1202,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	47096652	47179271	chr1:47096652-47179271	3	-	47096652	47096652	8553170	4	525,35,279,82,	0,80382,81518,82537,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	47115438	47118064	chr1:47115438-47118064	0	+	47115438	47115438	8553170	3	155,83,299,	0,1211,2327,
#Partially deleted in new
chr1	47137434	47148864	chr1:47137434-47148864	0	+	47137434	47137434	8553170	11	246,142,45,128,125,155,107,186,65,77,263,	0,3345,4136,4673,5834,6327,6922,7350,8431,8642,11167,
#Partially deleted in new
chr1	47137434	47148864	chr1:47137434-47148864	0	+	47137434	47137434	8553170	11	246,142,45,128,125,107,191,134,65,77,263,	0,3345,4136,4673,5834,6922,7115,7402,8431,8642,11167,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	47137449	47149275	chr1:47137449-47149275	1	+	47137485	47148797	789624	10	231,142,45,128,125,107,186,65,77,674,	0,3330,4121,4658,5819,6907,7335,8416,8627,11152,
#Partially deleted in new
chr1	47137453	47147402	chr1:47137453-47147402	1	+	47137485	47146157	789624	9	227,142,45,128,125,107,186,65,1326,	0,3326,4117,4654,5815,6903,7331,8412,8623,
#Partially deleted in new
chr1	47137454	47146483	chr1:47137454-47146483	1	+	47137485	47146157	789624	11	226,142,45,128,125,155,107,191,134,65,407,	0,3325,4116,4653,5814,6307,6902,7095,7382,8411,8622,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	47137454	47149741	chr1:47137454-47149741	3	+	47137485	47148797	789624	12	226,142,45,128,125,155,107,191,134,65,77,1140,	0,3325,4116,4653,5814,6307,6902,7095,7382,8411,8622,11147,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	47137462	47149735	chr1:47137462-47149735	1	+	47137485	47148797	789624	13	218,142,45,128,125,156,109,191,134,65,77,270,100,	0,3317,4108,4645,5806,6299,6892,7087,7374,8403,8614,11139,12173,
#Partially deleted in new
chr1	47164509	47165920	chr1:47164509-47165920	7	-	47164509	47164509	16724991	2	334,337,	0,1074,
#Deleted in new
chr1	47179249	47180339	chr1:47179249-47180339	3	+	47179249	47179249	789624	2	189,472,	0,618,
#Partially deleted in new
chr1	47183592	47190055	chr1:47183592-47190055	1	-	47183970	47189932	789624	4	451,96,109,190,	0,1409,3726,6273,
#Partially deleted in new
chr1	47183592	47190007	chr1:47183592-47190007	0	-	47183592	47183592	8553170	3	451,96,142,	0,1409,6273,
#Deleted in new
chr1	47183599	47185344	chr1:47183599-47185344	0	-	47183599	47183599	8553170	2	444,343,	0,1402,
#Partially deleted in new
chr1	47183970	47191044	chr1:47183970-47191044	3	-	47183970	47189932	789624	5	73,96,109,147,345,	0,1031,3348,5895,6729,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	47216289	47231715	chr1:47216289-47231715	3	-	47219719	47225888	0	5	3885,95,447,156,59,	0,7714,9153,12906,15367,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	47216291	47229771	chr1:47216291-47229771	1	-	47219719	47225888	0	4	3883,95,447,576,	0,7712,9151,12904,
#Partially deleted in new
chr1	47218687	47224076	chr1:47218687-47224076	0	-	47218687	47218687	8553170	3	1487,236,73,	0,4696,5316,
#Deleted in new
chr1	47224071	47232220	chr1:47224071-47232220	0	-	47224071	47224071	8553170	3	27,156,54,	0,5124,8095,
#Deleted in new
chr1	47225796	47230750	chr1:47225796-47230750	3	+	47225796	47225796	8553170	2	448,3588,	0,1366,
#Deleted in new
chr1	47228346	47231218	chr1:47228346-47231218	0	-	47228346	47228346	8553170	3	176,156,172,	0,849,2700,
#Deleted in new
chr1	47228347	47229453	chr1:47228347-47229453	0	-	47228347	47228347	8553170	2	175,258,	0,848,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	47250138	47314147	chr1:47250138-47314147	1	-	47251135	47310319	789624	19	1784,251,214,232,166,969,115,110,151,87,84,64,43,188,113,108,87,209,112,	0,10150,12764,19496,21937,30102,32206,37412,39296,43319,45626,49766,49971,51422,52095,54750,60137,62809,63897,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	47250138	47314147	chr1:47250138-47314147	3	-	47251135	47310319	0	18	1784,251,211,232,166,969,115,110,151,87,84,248,188,113,108,87,209,112,	0,10150,12764,19496,21937,30102,32206,37412,39296,43319,45626,49766,51422,52095,54750,60137,62809,63897,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	47250141	47314140	chr1:47250141-47314140	1	-	47251135	47310319	0	17	1781,251,214,232,166,969,115,110,151,87,84,248,188,113,108,87,105,	0,10147,12761,19493,21934,30099,32203,37409,39293,43316,45623,49763,51419,52092,54747,60134,63894,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	47250621	47313135	chr1:47250621-47313135	1	-	47251135	47310319	789624	17	1301,251,160,232,166,969,115,110,151,87,84,248,188,113,108,87,188,	0,9667,12281,19013,21454,29619,31723,36929,38813,42836,45143,49283,50939,51612,54267,59654,62326,
#Partially deleted in new
chr1	47260418	47314147	chr1:47260418-47314147	0	-	47260418	47310319	789624	18	121,160,232,166,969,115,110,151,87,84,64,43,188,113,108,87,74,112,	0,2484,9216,11657,19822,21926,27132,29016,33039,35346,39486,39691,41142,41815,44470,49857,52529,53617,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	47260429	47284073	chr1:47260429-47284073	0	-	47260429	47260429	8553170	6	110,211,232,166,969,1729,	0,2473,9205,11646,19811,21915,
#Partially deleted in new
chr1	47269634	47281057	chr1:47269634-47281057	0	-	47269634	47281057	789624	4	232,166,123,112,	0,2441,10606,11311,
#Partially deleted in new
chr1	47299776	47301725	chr1:47299776-47301725	0	-	47299776	47299776	8553170	2	376,165,	0,1784,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	47302233	47305317	chr1:47302233-47305317	0	-	47302233	47305052	789624	2	113,429,	0,2655,
#Partially deleted in new
chr1	47333796	47378839	chr1:47333796-47378839	3	+	47333945	47376745	789624	6	320,147,153,77,97,2136,	0,34672,39158,41112,41400,42907,
#Partially deleted in new
chr1	47333808	47377210	chr1:47333808-47377210	0	+	47333945	47375235	789624	5	308,147,153,97,507,	0,34660,39146,41388,42895,
#Partially deleted in new
chr1	47333878	47358875	chr1:47333878-47358875	1	+	47333945	47358303	789624	2	238,578,	0,24419,
#Partially deleted in new
chr1	47333913	47377123	chr1:47333913-47377123	1	+	47333945	47376745	789624	5	203,153,77,97,420,	0,39041,40995,41283,42790,
#Partially deleted in new
chr1	47333940	47373443	chr1:47333940-47373443	0	+	47333940	47333940	8553170	3	176,147,489,	0,34528,39014,
#Partially deleted in new
chr1	47380927	47408477	chr1:47380927-47408477	3	-	47380927	47380927	8553170	3	216,109,158,	0,5320,27392,
#Deleted in new
chr1	47416071	47418052	chr1:47416071-47418052	3	+	47416315	47417275	789624	1	1981,	0,
#Deleted in new
chr1	47432132	47434641	chr1:47432132-47434641	3	-	47432132	47432132	789624	1	2509,	0,
#Deleted in new
chr1	47436016	47440691	chr1:47436016-47440691	3	+	47438135	47439623	789624	1	4675,	0,
#Deleted in new
chr1	47483697	47484162	chr1:47483697-47484162	7	-	47483697	47483697	16724991	1	465,	0,
#Deleted in new
chr1	47497893	47498341	chr1:47497893-47498341	7	-	47497893	47497893	16724991	1	448,	0,
#Partially deleted in new
chr1	47550195	47550753	chr1:47550195-47550753	7	+	47550195	47550195	16724991	2	137,105,	0,453,
#Partially deleted in new
chr1	47688462	47703383	chr1:47688462-47703383	3	+	47688462	47688462	8553170	3	120,40,655,	0,5732,14266,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	47760527	47996895	chr1:47760527-47996895	3	-	47765901	47996789	789624	7	5579,270,91,175,147,564,208,	0,14642,17926,34058,40945,233506,236160,
#Partially deleted in new
chr1	47761131	47765547	chr1:47761131-47765547	3	-	47761131	47761131	8553170	2	149,258,	0,4158,
#Partially deleted in new
chr1	47775237	47994212	chr1:47775237-47994212	0	-	47775237	47775237	8553170	4	202,91,147,179,	0,3216,26235,218796,
#Deleted in new
chr1	47818065	47820237	chr1:47818065-47820237	3	+	47818065	47818065	8553170	2	150,1657,	0,515,
#Partially deleted in new
chr1	48050658	48091736	chr1:48050658-48091736	3	+	48050658	48050658	8553170	6	155,202,56,127,86,117,	0,2887,3552,4411,33288,40961,
#Partially deleted in new
chr1	48053544	48056776	chr1:48053544-48056776	0	+	48053544	48053544	8553170	4	203,56,127,127,	0,666,1525,3105,
#Partially deleted in new
chr1	48054208	48067201	chr1:48054208-48067201	1	+	48054208	48054208	8553170	3	58,127,604,	0,861,12389,
#Partially deleted in new
chr1	48078786	48082196	chr1:48078786-48082196	3	-	48078786	48078786	8553170	2	238,54,	0,3356,
#Deleted in new
chr1	48089367	48089634	chr1:48089367-48089634	7	+	48089367	48089367	16724991	1	267,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	48096091	48127948	chr1:48096091-48127948	7	-	48096091	48096091	16724991	2	499,41,	0,31816,
#Partially deleted in new
chr1	48101714	48161871	chr1:48101714-48161871	4	-	48101714	48101714	16724991	5	236,114,114,108,73,	0,26193,26745,57834,60084,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	48102067	48104707	chr1:48102067-48104707	0	+	48102067	48102067	8553170	1	2640,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	48102067	48104736	chr1:48102067-48104736	3	+	48102067	48102067	8553170	1	2669,	0,
#Partially deleted in new
chr1	48161798	48179230	chr1:48161798-48179230	5	-	48161798	48161798	16724991	4	111,282,348,76,	0,2832,4674,17356,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	48172971	48206857	chr1:48172971-48206857	3	+	48172971	48172971	8553170	5	248,122,84,149,48,	0,25104,32996,33174,33838,
#Partially deleted in new
chr1	48222684	48247601	chr1:48222684-48247601	0	+	48222736	48233679	789624	13	214,72,105,165,106,81,136,108,151,169,216,160,267,	0,2039,6165,6610,7915,8860,9682,10970,13044,14994,16637,19772,24650,
#Partially deleted in new
chr1	48222684	48248640	chr1:48222684-48248640	3	+	48222736	48247543	789624	14	214,72,105,165,106,81,206,136,108,151,169,216,160,1306,	0,2039,6165,6610,7915,8860,9261,9682,10970,13044,14994,16637,19772,24650,
#Partially deleted in new
chr1	48222684	48247601	chr1:48222684-48247601	1	+	48222736	48247543	789624	15	214,72,105,63,165,106,81,206,136,108,151,169,216,160,267,	0,2039,6165,6418,6610,7915,8860,9261,9682,10970,13044,14994,16637,19772,24650,
#Partially deleted in new
chr1	48222686	48248644	chr1:48222686-48248644	1	+	48222736	48247543	789624	15	212,72,105,75,165,106,81,206,136,108,151,169,216,160,1310,	0,2037,6163,6416,6608,7913,8858,9259,9680,10968,13042,14992,16635,19770,24648,
#Partially deleted in new
chr1	48222706	48248643	chr1:48222706-48248643	0	+	48222706	48222706	8553170	12	192,72,610,39,607,136,108,151,169,216,160,1309,	0,2017,6143,7960,8838,9660,10948,13022,14972,16615,19750,24628,
#Partially deleted in new
chr1	48222738	48237707	chr1:48222738-48237707	0	+	48222738	48230684	789624	10	160,72,105,165,39,81,136,108,151,29,	0,1985,6111,6556,7928,8806,9628,10916,12990,14940,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	48227887	48229561	chr1:48227887-48229561	3	-	48227887	48227887	8553170	1	1674,	0,
#Partially deleted in new
chr1	48229079	48231578	chr1:48229079-48231578	0	+	48229079	48229079	8553170	3	380,106,34,	0,1520,2465,
#Partially deleted in new
chr1	48238425	48242578	chr1:48238425-48242578	0	+	48238425	48238425	8553170	3	151,216,122,	0,896,4031,
#Partially deleted in new
chr1	48239386	48247718	chr1:48239386-48247718	0	+	48239386	48242021	789624	4	151,273,160,384,	0,2557,3070,7948,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	48240383	48248638	chr1:48240383-48248638	0	+	48240383	48240383	8553170	5	137,115,273,160,1304,	0,713,1560,2073,6951,
#Partially deleted in new
chr1	48262229	48263179	chr1:48262229-48263179	3	-	48262229	48262229	8553170	1	950,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	48295371	48472173	chr1:48295371-48472173	3	-	48298712	48472008	789624	13	3522,92,100,185,41,88,294,81,125,42,49,138,216,	0,10415,60298,64214,89937,99895,103979,108430,116092,117738,156180,157622,176586,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	48295373	48472208	chr1:48295373-48472208	1	-	48298712	48472008	789624	12	3520,92,100,185,41,88,294,81,125,49,138,251,	0,10413,60296,64212,89935,99893,103977,108428,116090,156178,157620,176584,
#Partially deleted in new
chr1	48297836	48472010	chr1:48297836-48472010	1	-	48298712	48472008	789624	13	1057,92,52,185,41,88,294,81,125,42,49,138,53,	0,7950,57881,61749,87472,97430,101514,105965,113627,115273,153715,155157,174121,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	48298643	48400911	chr1:48298643-48400911	0	-	48385309	48400816	789624	9	250,92,100,185,41,46,88,294,122,	0,7143,57026,60942,86665,94611,96623,100707,102146,
#Partially deleted in new
chr1	48305798	48400850	chr1:48305798-48400850	0	-	48305798	48400781	789624	7	80,52,185,41,88,294,78,	0,49919,53787,79510,89468,93552,94974,
#Partially deleted in new
chr1	48305804	48402744	chr1:48305804-48402744	0	-	48305804	48305804	8553170	7	74,100,185,41,88,294,115,	0,49865,53781,79504,89462,93546,96825,
#Deleted in new
chr1	48325079	48326123	chr1:48325079-48326123	7	-	48325079	48325079	16724991	1	1044,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	48344208	48344315	chr1:48344208-48344315	3	+	48344208	48344208	8553170	1	107,	0,
#Partially deleted in new
chr1	48355444	48359722	chr1:48355444-48359722	0	-	48355444	48355444	8553170	2	325,137,	0,4141,
#Partially deleted in new
chr1	48399051	48472016	chr1:48399051-48472016	0	-	48399051	48399051	8553170	6	593,81,125,42,138,59,	0,4750,12412,14058,53942,72906,
#Partially deleted in new
chr1	48399582	48472085	chr1:48399582-48472085	0	-	48411581	48472008	789624	6	62,81,141,49,138,128,	0,4219,11881,51969,53411,72375,
#Partially deleted in new
chr1	48411463	48451586	chr1:48411463-48451586	0	-	48411463	48411463	8553170	4	125,42,91,35,	0,1646,24869,40088,
#Partially deleted in new
chr1	48411486	48472155	chr1:48411486-48472155	0	-	48411486	48411486	8553170	5	118,42,49,138,198,	0,1623,40065,41507,60471,
#Deleted in new
chr1	48435966	48437223	chr1:48435966-48437223	7	+	48435966	48435966	16724991	1	1257,	0,
#Deleted in new
chr1	48447935	48448042	chr1:48447935-48448042	3	+	48447935	48447935	8553170	1	107,	0,
#Deleted in new
chr1	48497262	48497736	chr1:48497262-48497736	7	-	48497262	48497262	16724991	1	474,	0,
#Partially deleted in new
chr1	48532854	50023913	chr1:48532854-50023913	3	-	48534172	50023796	789624	14	1439,27,97,163,153,112,115,90,40,217,95,125,123,151,	0,2035,6787,54149,57978,101638,120482,130297,334336,512729,712915,1164458,1318541,1490908,
#Partially deleted in new
chr1	48534172	48663244	chr1:48534172-48663244	1	-	48534172	48663242	789624	8	121,27,97,163,153,112,115,93,	0,717,5469,52831,56660,100320,119164,128979,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	48583869	49045714	chr1:48583869-49045714	0	-	48586908	49045714	789624	7	3297,153,112,115,90,40,131,	0,6963,50623,69467,79282,283321,461714,
#Partially deleted in new
chr1	48634207	50023913	chr1:48634207-50023913	1	-	48634480	50023796	789624	9	397,115,90,40,217,95,125,123,151,	0,19129,28944,232983,411376,611562,1063105,1217188,1389555,
#Partially deleted in new
chr1	48727522	48776918	chr1:48727522-48776918	3	-	48727885	48776831	789624	6	521,214,149,385,134,313,	0,8716,15100,31377,33814,49083,
#Partially deleted in new
chr1	48727866	48758933	chr1:48727866-48758933	0	-	48727866	48727866	8553170	3	177,214,34,	0,8372,31033,
#Partially deleted in new
chr1	48727869	48776932	chr1:48727869-48776932	0	-	48727869	48727869	8553170	6	174,214,149,467,134,327,	0,8369,14753,31030,33467,48736,
#Partially deleted in new
chr1	48727872	48759255	chr1:48727872-48759255	0	-	48727872	48727872	8553170	2	171,356,	0,31027,
#Partially deleted in new
chr1	48759206	48776969	chr1:48759206-48776969	0	-	48759206	48759206	8553170	2	160,364,	0,17399,
#Partially deleted in new
chr1	48761047	48776735	chr1:48761047-48776735	0	-	48761047	48761047	8553170	2	423,130,	0,15558,
#Partially deleted in new
chr1	48817506	50023900	chr1:48817506-50023900	1	-	48818202	50023796	789624	7	716,40,217,95,125,123,138,	0,49684,228077,428263,879806,1033889,1206256,
#Partially deleted in new
chr1	49025594	49187585	chr1:49025594-49187585	3	+	49025594	49025594	8553170	4	71,107,271,344,	0,22712,149217,161647,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	49374200	49472085	chr1:49374200-49472085	3	-	49374200	49374200	789624	4	144,72,208,90,	0,48862,95598,97795,
#Partially deleted in new
chr1	49527227	49851518	chr1:49527227-49851518	0	-	49527227	49527227	8553170	3	377,125,123,	0,170085,324168,
#Deleted in new
chr1	49691261	49691523	chr1:49691261-49691523	7	-	49691261	49691261	16724991	1	262,	0,
#Partially deleted in new
chr1	49841820	49846400	chr1:49841820-49846400	7	+	49841820	49841820	16724991	3	33,223,1710,	0,344,2870,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	49994317	49996218	chr1:49994317-49996218	3	+	49994317	49994317	8553170	1	1901,	0,
#Deleted in new
chr1	50017091	50017503	chr1:50017091-50017503	7	+	50017091	50017091	16724991	1	412,	0,
#Partially deleted in new
chr1	50048013	50201868	chr1:50048013-50201868	1	+	50048164	50201178	0	7	169,241,104,154,226,39,1018,	0,96943,129075,145751,147547,149415,152837,
#Partially deleted in new
chr1	50103909	50203770	chr1:50103909-50203770	1	+	50103991	50201178	0	7	91,241,104,154,226,39,2920,	0,41047,73179,89855,91651,93519,96941,
#Partially deleted in new
chr1	50105689	50145184	chr1:50105689-50145184	0	+	50105689	50105689	8553170	2	261,228,	0,39267,
#Partially deleted in new
chr1	50106264	50201399	chr1:50106264-50201399	1	+	50106276	50201178	789624	7	129,241,104,154,226,39,549,	0,38692,70824,87500,89296,91164,94586,
#Partially deleted in new
chr1	50108932	50203786	chr1:50108932-50203786	1	+	50109189	50201178	0	7	266,241,104,154,226,39,2936,	0,36024,68156,84832,86628,88496,91918,
#Partially deleted in new
chr1	50108965	50201402	chr1:50108965-50201402	3	+	50109189	50201178	0	7	233,241,104,154,226,39,594,	0,35991,68123,84799,86595,88463,91843,
#Partially deleted in new
chr1	50109625	50203054	chr1:50109625-50203054	1	+	50109940	50201178	789624	7	339,241,104,154,226,39,2246,	0,35331,67463,84139,85935,87803,91183,
#Partially deleted in new
chr1	50109705	50202294	chr1:50109705-50202294	1	+	50109940	50201178	789624	7	259,241,104,154,226,39,1444,	0,35251,67383,84059,85855,87723,91145,
#Partially deleted in new
chr1	50109815	50145178	chr1:50109815-50145178	0	+	50109815	50109815	8553170	3	149,87,222,	0,31956,35141,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	50114936	50115282	chr1:50114936-50115282	7	+	50114936	50114936	16724991	1	346,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	50144952	50181300	chr1:50144952-50181300	0	+	50144952	50144952	8553170	3	245,104,1757,	0,32136,34591,
#Deleted in new
chr1	50174305	50175868	chr1:50174305-50175868	3	-	50174305	50174305	8553170	2	435,423,	0,1140,
#Partially deleted in new
chr1	50177129	50197585	chr1:50177129-50197585	0	+	50177129	50177129	8553170	4	63,154,226,157,	0,16635,18431,20299,
#Partially deleted in new
chr1	50206083	50223127	chr1:50206083-50223127	3	-	50206083	50206083	8553170	2	225,25,	0,17019,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	50252568	50258994	chr1:50252568-50258994	3	+	50252568	50252568	8553170	3	153,64,3087,	0,3179,3339,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	50265741	50321124	chr1:50265741-50321124	1	-	50265741	50265741	8553170	2	848,108,	0,55275,
#Partially deleted in new
chr1	50266309	50280175	chr1:50266309-50280175	1	-	50266309	50266309	8553170	2	280,91,	0,13775,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	50284101	50321120	chr1:50284101-50321120	1	-	50284101	50284101	8553170	3	17,431,104,	0,33126,36915,
#Deleted in new
chr1	50295310	50295546	chr1:50295310-50295546	0	-	50295310	50295310	8553170	1	236,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	50317186	50321170	chr1:50317186-50321170	1	-	50317186	50317186	8553170	2	472,154,	0,3830,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	50317212	50321120	chr1:50317212-50321120	1	-	50317212	50317212	8553170	3	446,125,104,	0,1069,3804,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	50317907	50321111	chr1:50317907-50321111	1	-	50317907	50317907	8553170	2	499,95,	0,3109,
#Deleted in new
chr1	50326130	50327007	chr1:50326130-50327007	7	+	50326130	50326130	16724991	1	877,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	50398824	50399773	chr1:50398824-50399773	7	-	50398824	50398824	16724991	2	526,127,	0,822,
#Partially deleted in new
chr1	50405429	50406024	chr1:50405429-50406024	7	-	50405429	50405429	16724991	1	595,	0,
#Deleted in new
chr1	50417549	50423500	chr1:50417549-50423500	3	-	50418664	50421536	789624	3	2185,567,385,	0,3428,5566,
#Deleted in new
chr1	50417549	50421632	chr1:50417549-50421632	1	-	50418664	50421536	789624	2	2185,655,	0,3428,
#Deleted in new
chr1	50423608	50425316	chr1:50423608-50425316	3	+	50423608	50423608	8553170	3	289,164,477,	0,829,1231,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	50437027	50960263	chr1:50437027-50960263	3	-	50441439	50959811	0	19	4496,216,78,81,89,137,155,82,64,127,96,87,106,92,92,206,47,69,497,	0,38436,53560,54693,98341,102564,130049,145590,146624,147657,159093,218414,268758,301835,307656,350972,364603,420901,522739,
#Partially deleted in new
chr1	50441275	50959793	chr1:50441275-50959793	1	-	50441439	50959787	789624	16	248,216,78,81,89,137,155,82,13,11,92,92,206,47,69,27,	0,34188,49312,50445,94093,98316,125801,141342,142376,264605,297587,303408,346724,360355,416653,518491,
#Partially deleted in new
chr1	50441275	50706051	chr1:50441275-50706051	0	-	50452085	50705860	789624	14	248,401,216,78,81,89,137,155,82,64,127,96,87,266,	0,10517,34188,49312,50445,94093,98316,125801,141342,142376,143409,154845,214166,264510,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	50461468	50471150	chr1:50461468-50471150	3	+	50461468	50461468	8553170	5	28,122,107,156,90,	0,723,7969,9265,9592,
#Partially deleted in new
chr1	50539591	50606944	chr1:50539591-50606944	0	-	50539591	50539591	8553170	7	137,155,82,64,127,96,98,	0,27485,43026,44060,45093,56529,67255,
#Deleted in new
chr1	50582403	50582511	chr1:50582403-50582511	3	+	50582403	50582403	8553170	1	108,	0,
#Partially deleted in new
chr1	50705783	50959738	chr1:50705783-50959738	0	-	50705783	50705783	8553170	7	108,92,92,206,47,69,67,	0,33079,38900,82216,95847,152145,253888,
#Partially deleted in new
chr1	50780339	50781150	chr1:50780339-50781150	7	+	50780339	50780339	16724991	1	811,	0,
#Partially deleted in new
chr1	50846467	50846837	chr1:50846467-50846837	7	+	50846467	50846467	16724991	1	370,	0,
#Partially deleted in new
chr1	50960744	50974633	chr1:50960744-50974633	3	+	50970368	50974270	0	4	59,1964,140,741,	0,7191,9613,13148,
#Deleted in new
chr1	50968694	50974633	chr1:50968694-50974633	1	+	50970368	50974270	0	3	1205,140,741,	0,1663,5198,
#Deleted in new
chr1	50969943	50974558	chr1:50969943-50974558	1	+	50970368	50974270	0	2	554,666,	0,3949,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	51059836	51059905	chr1:51059836-51059905	3	+	51059836	51059836	5263520	1	69,	0,
#Partially deleted in new
chr1	51060017	51060103	chr1:51060017-51060103	3	+	51060017	51060017	5263520	1	86,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	51102270	51147845	chr1:51102270-51147845	1	+	51118726	51147771	789624	5	89,106,136,37,379,	0,10193,16395,43453,45196,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	51102285	51129742	chr1:51102285-51129742	0	+	51102285	51102285	8553170	4	97,106,136,74,	0,10178,16380,27383,
#Partially deleted in new
chr1	51112459	51148082	chr1:51112459-51148082	1	+	51112459	51147771	789624	4	110,136,37,616,	0,6206,33264,35007,
#Deleted in new
chr1	51157787	51158471	chr1:51157787-51158471	7	-	51157787	51157787	16724991	1	684,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	51195094	51235096	chr1:51195094-51235096	3	-	51195094	51195094	789624	2	2234,132,	0,39870,
#Partially deleted in new
chr1	51236270	51273455	chr1:51236270-51273455	3	+	51236756	51271322	789624	3	609,170,2305,	0,33685,34880,
#Partially deleted in new
chr1	51236338	51271562	chr1:51236338-51271562	0	+	51236338	51236338	8553170	2	541,412,	0,34812,
#Deleted in new
chr1	51250602	51251472	chr1:51250602-51251472	7	-	51250602	51250602	16724991	1	870,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	51264915	51266074	chr1:51264915-51266074	3	-	51264915	51264915	8553170	2	300,135,	0,1024,
#Partially deleted in new
chr1	51269917	51271536	chr1:51269917-51271536	0	+	51269917	51269917	8553170	2	208,386,	0,1233,
#Partially deleted in new
chr1	51287257	51345116	chr1:51287257-51345116	3	-	51288156	51345043	789624	18	1023,117,115,112,121,92,162,60,68,109,66,100,65,68,77,132,105,126,	0,1581,2747,3256,7133,8821,14314,15099,15248,15826,17823,18719,22003,23996,24861,25554,34463,57733,
#Partially deleted in new
chr1	51287257	51322210	chr1:51287257-51322210	1	-	51288156	51322161	789624	18	1023,117,115,112,121,92,162,60,68,109,66,100,170,68,77,132,105,93,	0,1581,2747,3256,7133,8821,14314,15099,15248,15826,17823,18719,22003,23996,24861,25554,34463,34860,
#Partially deleted in new
chr1	51287257	51297990	chr1:51287257-51297990	1	-	51288156	51296155	789624	7	1023,117,115,112,121,92,200,	0,1581,2747,3256,7133,8821,10533,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	51287811	51330173	chr1:51287811-51330173	1	-	51288156	51321785	789624	18	469,117,115,112,121,92,162,60,68,109,66,100,65,68,77,132,105,135,	0,1027,2193,2702,6579,8267,13760,14545,14694,15272,17269,18165,21449,23442,24307,25000,33909,42227,
#Partially deleted in new
chr1	51287969	51322258	chr1:51287969-51322258	1	-	51288156	51322161	789624	18	311,117,115,112,121,92,162,60,68,109,66,100,65,68,77,132,105,141,	0,869,2035,2544,6421,8109,13602,14387,14536,15114,17111,18007,21291,23284,24149,24842,33751,34148,
#Partially deleted in new
chr1	51287985	51297960	chr1:51287985-51297960	0	-	51287985	51287985	8553170	6	295,117,115,112,121,170,	0,853,2019,2528,6405,9805,
#Partially deleted in new
chr1	51290091	51296860	chr1:51290091-51296860	0	-	51290091	51296155	789624	5	28,112,121,92,76,	0,422,4299,5987,6693,
#Partially deleted in new
chr1	51294457	51305593	chr1:51294457-51305593	0	-	51294457	51294457	8553170	8	54,92,162,60,68,109,66,67,	0,1621,7114,7899,8048,8626,10623,11069,
#Partially deleted in new
chr1	51295537	51330562	chr1:51295537-51330562	1	-	51296047	51330477	789624	13	633,162,60,68,109,66,100,170,68,77,132,105,126,	0,6034,6819,6968,7546,9543,10439,13723,15716,16581,17274,26183,34899,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	51297217	51331346	chr1:51297217-51331346	1	-	51302080	51331185	789624	11	5199,68,109,66,100,170,68,77,132,105,193,	0,5288,5866,7863,8759,12043,14036,14901,15594,24503,33936,
#Partially deleted in new
chr1	51301392	51303158	chr1:51301392-51303158	0	-	51301392	51301392	8553170	5	48,162,60,68,75,	0,179,964,1113,1691,
#Partially deleted in new
chr1	51301704	51330947	chr1:51301704-51330947	0	-	51301704	51321785	789624	12	29,60,68,109,66,100,65,68,77,132,105,52,	0,652,801,1379,3376,4272,7556,9549,10414,11107,20016,29191,
#Partially deleted in new
chr1	51302356	51330564	chr1:51302356-51330564	0	-	51302356	51330477	789624	11	60,68,109,66,100,65,68,77,132,105,128,	0,149,727,2724,3620,6904,8897,9762,10455,19364,28080,
#Partially deleted in new
chr1	51303083	51325976	chr1:51303083-51325976	0	-	51303083	51321785	789624	9	109,66,100,65,68,77,132,105,128,	0,1997,2893,6177,8170,9035,9728,18637,22765,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	51306023	51330202	chr1:51306023-51330202	0	-	51306023	51321785	789624	7	53,170,68,77,132,105,164,	0,3237,5230,6095,6788,15697,24015,
#Partially deleted in new
chr1	51309391	51345116	chr1:51309391-51345116	0	-	51309391	51345043	789624	6	39,68,77,132,105,126,	0,1862,2727,3420,12329,35599,
#Partially deleted in new
chr1	51309398	51325953	chr1:51309398-51325953	0	-	51309398	51321785	789624	6	32,68,77,132,105,105,	0,1855,2720,3413,12322,16450,
#Partially deleted in new
chr1	51311256	51345116	chr1:51311256-51345116	0	-	51311256	51345043	789624	6	65,77,132,105,72,126,	0,862,1555,10464,31750,33734,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	51329653	51335324	chr1:51329653-51335324	3	+	51329653	51329653	8553170	3	156,84,572,	0,476,5099,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	51329749	51331281	chr1:51329749-51331281	1	+	51329749	51329749	789624	3	60,84,410,	0,380,1122,
#Partially deleted in new
chr1	51354262	51519241	chr1:51354262-51519241	1	-	51356699	51519231	789624	23	2584,185,163,77,67,134,36,91,114,162,73,86,157,146,90,60,126,66,96,48,90,42,43,	0,6908,9603,11690,40118,44769,46655,48172,49156,55272,67523,86084,90626,92697,93783,106828,109410,110998,114210,117427,118596,127010,164936,
#Partially deleted in new
chr1	51354262	51519328	chr1:51354262-51519328	3	-	51356699	51519231	0	25	2584,185,163,77,67,134,36,91,114,204,198,162,73,86,157,146,90,60,126,66,96,48,90,42,130,	0,6908,9603,11690,40118,44769,46655,48172,49156,51642,53872,55272,67523,86084,90626,92697,93783,106828,109410,110998,114210,117427,118596,127010,164936,
#Partially deleted in new
chr1	51372269	51373224	chr1:51372269-51373224	7	+	51372269	51372269	16724991	1	955,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	51382307	51382414	chr1:51382307-51382414	3	+	51382307	51382307	8553170	1	107,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	51394211	51403451	chr1:51394211-51403451	0	-	51394211	51394211	8553170	6	236,101,134,36,91,33,	0,2899,4820,6706,8223,9207,
#Partially deleted in new
chr1	51394418	51401199	chr1:51394418-51401199	0	-	51394418	51394418	8553170	3	29,134,282,	0,4613,6499,
#Partially deleted in new
chr1	51403428	51422104	chr1:51403428-51422104	0	-	51403428	51403428	8553170	5	104,204,198,162,319,	0,2476,4706,6106,18357,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	51457535	51519245	chr1:51457535-51519245	0	-	51457535	51457535	8553170	9	1198,60,126,66,96,48,90,42,47,	0,3555,6137,7725,10937,14154,15323,23737,61663,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	51458395	51465326	chr1:51458395-51465326	0	-	51458395	51458395	8553170	5	338,108,60,126,66,	0,645,2695,5277,6865,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	51460943	51519254	chr1:51460943-51519254	0	-	51460943	51460943	8553170	8	207,126,66,96,48,90,42,56,	0,2729,4317,7529,10746,11915,20329,58255,
#Partially deleted in new
chr1	51461122	51519227	chr1:51461122-51519227	0	-	51463746	51519227	789624	7	28,77,60,48,90,42,29,	0,2550,4144,10567,11736,20150,58076,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	51461720	51463416	chr1:51461720-51463416	3	+	51461720	51461720	8553170	2	415,263,	0,1433,
#Partially deleted in new
chr1	51518308	51560961	chr1:51518308-51560961	0	+	51518308	51518308	8553170	2	175,80,	0,42573,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	51518382	51561629	chr1:51518382-51561629	3	+	51518382	51518382	8553170	3	64,139,159,	0,42502,43088,
#Deleted in new
chr1	51538624	51538729	chr1:51538624-51538729	3	-	51538624	51538624	8553170	1	105,	0,
#Partially deleted in new
chr1	51561865	51594897	chr1:51561865-51594897	7	-	51561865	51561865	16724991	7	168,114,236,92,203,102,31,	0,1759,4440,5886,7682,12088,33001,
#Partially deleted in new
chr1	51567731	51583756	chr1:51567731-51583756	4	-	51567731	51567731	16724991	4	112,203,102,293,	0,1816,6222,15732,
#Partially deleted in new
chr1	51617091	51787966	chr1:51617091-51787966	0	+	51617110	51669622	789624	23	130,51,381,77,96,48,30,51,91,105,160,113,119,86,172,85,111,64,141,79,92,136,252,	0,34899,52342,96911,128444,129618,131277,133053,143598,144775,148730,154978,155513,159741,164072,165467,166823,167172,167350,168716,169434,170261,170623,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr1	51617091	51788469	chr1:51617091-51788469	1	+	51617110	51787789	789624	24	130,51,79,77,69,96,48,30,51,91,105,160,113,119,86,172,85,111,64,141,79,92,136,755,	0,34899,52342,96911,123051,128444,129618,131277,133053,143598,144775,148730,154978,155513,159741,164072,165467,166823,167172,167350,168716,169434,170261,170623,
#Partially deleted in new
chr1	51617091	51788469	chr1:51617091-51788469	0	+	51617091	51714044	789624	23	130,51,77,96,48,30,51,39,91,105,160,113,119,86,172,85,111,64,141,79,92,136,755,	0,34899,96911,128444,129618,131277,133053,139228,143598,144775,148730,154978,155513,159741,164072,165467,166823,167172,167350,168716,169434,170261,170623,
#Partially deleted in new
chr1	51617108	51788469	chr1:51617108-51788469	3	+	51617110	51787789	789624	24	113,51,79,77,96,48,30,51,39,91,105,160,113,119,86,172,85,111,64,141,79,92,136,755,	0,34882,52325,96894,128427,129601,131260,133036,139211,143581,144758,148713,154961,155496,159724,164055,165450,166806,167155,167333,168699,169417,170244,170606,
#Partially deleted in new
chr1	51617108	51788469	chr1:51617108-51788469	1	+	51617110	51787789	789624	23	113,79,77,96,48,30,51,39,91,105,160,113,119,86,172,85,111,64,141,79,92,136,755,	0,52325,96894,128427,129601,131260,133036,139211,143581,144758,148713,154961,155496,159724,164055,165450,166806,167155,167333,168699,169417,170244,170606,
#Partially deleted in new
chr1	51617113	51776912	chr1:51617113-51776912	0	+	51617113	51765872	789624	12	108,51,79,77,96,48,30,51,160,113,119,80,	0,34877,52320,96889,128422,129596,131255,133031,148708,154956,155491,159719,
#Deleted in new
chr1	51707137	51708137	chr1:51707137-51708137	7	-	51707137	51707137	16724991	1	1000,	0,
#Deleted in new
chr1	51709061	51709940	chr1:51709061-51709940	7	+	51709061	51709061	16724991	1	879,	0,
#Partially deleted in new
chr1	51714002	51756657	chr1:51714002-51756657	0	+	51714002	51714002	8553170	6	77,96,48,30,51,338,	0,31533,32707,34366,36142,42317,
#Partially deleted in new
chr1	51724774	51724896	chr1:51724774-51724896	3	-	51724774	51724774	8553170	1	122,	0,
#Partially deleted in new
chr1	51729302	51765905	chr1:51729302-51765905	0	+	51750147	51765905	789624	8	76,96,48,30,51,91,105,84,	0,16233,17407,19066,20842,31387,32564,36519,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	51729302	51760740	chr1:51729302-51760740	0	+	51750147	51752580	789624	7	76,96,48,30,51,223,51,	0,16233,17407,19066,20842,23200,31387,
#Partially deleted in new
chr1	51729599	51761964	chr1:51729599-51761964	0	+	51750147	51761964	789624	8	110,96,48,30,51,39,91,98,	0,15936,17110,18769,20545,26720,31090,32267,
#Partially deleted in new
chr1	51729807	51787789	chr1:51729807-51787789	1	+	51750147	51787789	789624	21	317,96,48,30,51,39,91,105,160,113,119,86,172,85,111,64,141,79,92,136,75,	0,15728,16902,18561,20337,26512,30882,32059,36014,42262,42797,47025,51356,52751,54107,54456,54634,56000,56718,57545,57907,
#Partially deleted in new
chr1	51729814	51788469	chr1:51729814-51788469	1	+	51729974	51787789	789624	20	187,96,48,30,51,91,105,160,113,119,86,172,85,111,64,141,79,92,136,755,	0,15721,16895,18554,20330,30875,32052,36007,42255,42790,47018,51349,52744,54100,54449,54627,55993,56711,57538,57900,
#Partially deleted in new
chr1	51729824	51760771	chr1:51729824-51760771	0	+	51729824	51729824	8553170	8	177,96,48,30,51,39,55,82,	0,15711,16885,18544,20320,26495,27116,30865,
#Partially deleted in new
chr1	51729903	51788469	chr1:51729903-51788469	1	+	51750147	51787789	789624	20	221,96,48,30,51,91,105,160,113,119,86,172,85,111,64,141,79,92,136,755,	0,15632,16806,18465,20241,30786,31963,35918,42166,42701,46929,51260,52655,54011,54360,54538,55904,56622,57449,57811,
#Partially deleted in new
chr1	51730033	51788469	chr1:51730033-51788469	1	+	51750147	51787789	789624	19	91,48,30,51,91,105,160,113,119,86,172,85,111,64,141,79,92,136,755,	0,16676,18335,20111,30656,31833,35788,42036,42571,46799,51130,52525,53881,54230,54408,55774,56492,57319,57681,
#Partially deleted in new
chr1	51745089	51748398	chr1:51745089-51748398	0	+	51745089	51745089	8553170	3	542,48,30,	0,1620,3279,
#Partially deleted in new
chr1	51745596	51759546	chr1:51745596-51759546	0	+	51745596	51745596	8553170	6	35,48,30,51,39,30,	0,1113,2772,4548,10723,13920,
#Partially deleted in new
chr1	51750153	51776918	chr1:51750153-51776918	0	+	51750153	51760689	789624	8	42,39,115,105,160,113,119,86,	0,6166,10512,11713,15668,21916,22451,26679,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	51759623	51788469	chr1:51759623-51788469	0	+	51759623	51759623	8553170	15	1157,105,160,113,119,86,172,85,111,64,141,79,92,136,755,	0,2243,6198,12446,12981,17209,21540,22935,24291,24640,24818,26184,26902,27729,28091,
#Partially deleted in new
chr1	51760705	51776903	chr1:51760705-51776903	0	+	51760705	51772614	789624	5	75,105,160,119,71,	0,1161,5116,11899,16127,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	51765539	51788464	chr1:51765539-51788464	0	+	51765539	51765539	8553170	8	442,113,119,172,85,2703,136,750,	0,6530,7065,15624,17019,18375,21813,22175,
#Partially deleted in new
chr1	51772075	51781668	chr1:51772075-51781668	0	+	51772075	51772075	8553170	5	107,119,86,172,81,	0,529,4757,9088,9512,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	51784574	51798427	chr1:51784574-51798427	0	+	51784574	51787789	789624	6	8,79,92,136,75,473,	0,1233,1951,2778,3140,13380,
#Partially deleted in new
chr1	51789190	51878805	chr1:51789190-51878805	1	-	51789235	51878615	789624	31	243,90,117,91,84,53,48,139,32,163,128,151,52,120,87,124,105,55,59,121,78,70,74,58,123,96,74,154,82,289,531,	0,377,1342,1709,2387,2855,3186,5281,5632,9058,11365,14623,16319,17603,20124,21090,22803,24844,25360,25502,27121,28875,30609,32307,34473,36096,38605,44826,46940,51035,89084,
#Partially deleted in new
chr1	51789190	51878805	chr1:51789190-51878805	3	-	51789235	51878615	789624	33	243,90,117,91,84,53,48,139,32,163,128,151,52,120,87,124,105,55,59,121,78,70,74,58,123,96,74,154,82,70,134,289,531,	0,377,1342,1709,2387,2855,3186,5281,5632,9058,11365,14623,16319,17603,20124,21090,22803,24844,25360,25502,27121,28875,30609,32307,34473,36096,38605,44826,46940,47178,48296,51035,89084,
#Partially deleted in new
chr1	51789190	51814071	chr1:51789190-51814071	0	-	51789235	51814071	789624	16	243,90,117,91,53,48,139,32,163,128,151,52,87,124,105,37,	0,377,1342,1709,2855,3186,5281,5632,9058,11365,14623,16319,20124,21090,22803,24844,
#Partially deleted in new
chr1	51789195	51878040	chr1:51789195-51878040	1	-	51789235	51840459	789624	33	238,90,117,91,84,53,48,139,32,163,128,151,52,120,87,124,105,55,59,121,78,70,74,58,123,96,74,154,82,70,134,289,58,	0,372,1337,1704,2382,2850,3181,5276,5627,9053,11360,14618,16314,17598,20119,21085,22798,24839,25355,25497,27116,28870,30604,32302,34468,36091,38600,44821,46935,47173,48291,51030,88787,
#Partially deleted in new
chr1	51789195	51878937	chr1:51789195-51878937	1	-	51792072	51878615	789624	31	238,90,117,91,84,53,49,139,32,163,128,151,52,120,87,124,105,55,59,121,78,70,74,58,123,96,74,154,82,289,663,	0,372,1337,1704,2382,2850,3181,5276,5627,9053,11360,14618,16314,17598,20119,21085,22798,24839,25355,25497,27116,28870,30604,32302,34468,36091,38600,44821,46935,51030,89079,
#Partially deleted in new
chr1	51789211	51840454	chr1:51789211-51840454	0	-	51789211	51789211	8553170	31	222,90,117,91,84,53,48,139,32,163,128,151,52,120,87,124,105,55,59,121,78,70,74,58,123,96,74,154,82,70,229,	0,356,1321,1688,2366,2834,3165,5260,5611,9037,11344,14602,16298,17582,20103,21069,22782,24823,25339,25481,27100,28854,30588,32286,34452,36075,38584,44805,46919,47157,51014,
#Deleted in new
chr1	51789216	51789822	chr1:51789216-51789822	0	-	51789216	51789216	8553170	2	217,255,	0,351,
#Partially deleted in new
chr1	51793933	51798366	chr1:51793933-51798366	0	+	51793933	51793933	8553170	2	141,91,	0,4342,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	51793964	51798427	chr1:51793964-51798427	0	+	51793964	51793964	8553170	2	89,473,	0,3990,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	51793984	51799154	chr1:51793984-51799154	3	+	51793984	51793984	8553170	2	90,1200,	0,3970,
#Deleted in new
chr1	51794471	51795708	chr1:51794471-51795708	0	-	51794471	51794471	8553170	2	139,886,	0,351,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	51794471	51801094	chr1:51794471-51801094	0	-	51794471	51794471	8553170	5	139,32,163,128,238,	0,351,3777,6084,6385,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	51795210	51798409	chr1:51795210-51798409	0	+	51795210	51795210	8553170	2	478,455,	0,2744,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	51801027	51801307	chr1:51801027-51801307	3	+	51801027	51801027	8553170	1	280,	0,
#Partially deleted in new
chr1	51810290	51814625	chr1:51810290-51814625	0	-	51810290	51810290	8553170	3	114,105,591,	0,1703,3744,
#Partially deleted in new
chr1	51815928	51834073	chr1:51815928-51834073	0	-	51815928	51815928	8553170	8	461,70,74,58,123,96,74,57,	0,2137,3871,5569,7735,9358,11867,18088,
#Partially deleted in new
chr1	51825296	51837572	chr1:51825296-51837572	0	-	51825296	51825296	8553170	6	86,74,154,82,70,117,	0,2499,8720,10834,11072,12159,
#Deleted in new
chr1	51836343	51836402	chr1:51836343-51836402	3	-	51836343	51836343	5263520	1	59,	0,
#Partially deleted in new
chr1	51839991	51878771	chr1:51839991-51878771	0	-	51839991	51839991	8553170	2	523,497,	0,38283,
#Deleted in new
chr1	51859777	51860135	chr1:51859777-51860135	7	+	51859777	51859777	16724991	1	358,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	51862113	51878723	chr1:51862113-51878723	0	-	51862113	51862113	8553170	2	305,449,	0,16161,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	51907955	51990764	chr1:51907955-51990764	3	-	51919926	51977117	0	5	12159,125,119,228,213,	0,25362,29338,68934,82596,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	51973409	51973535	chr1:51973409-51973535	7	+	51973409	51973409	16724991	1	126,	0,
#Deleted in new
chr1	51980472	51980814	chr1:51980472-51980814	7	+	51980472	51980472	16724991	1	342,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	51995739	51996039	chr1:51995739-51996039	3	+	51995739	51995739	8553170	1	300,	0,
#Partially deleted in new
chr1	52020130	52056171	chr1:52020130-52056171	3	-	52020932	52055096	0	7	882,84,70,74,53,61,1172,	0,3360,4379,7144,8447,21406,34869,
#Partially deleted in new
chr1	52020130	52023574	chr1:52020130-52023574	0	-	52020130	52020130	8553170	3	275,87,84,	0,795,3360,
#Partially deleted in new
chr1	52020152	52033350	chr1:52020152-52033350	3	-	52032696	52033350	8553170	7	860,84,70,74,53,182,663,	0,3338,4357,7122,8425,10214,12535,
#Partially deleted in new
chr1	52020913	52055176	chr1:52020913-52055176	0	-	52030535	52055096	789624	8	99,84,70,74,53,182,61,177,	0,2577,3596,6361,7664,9453,20623,34086,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	52023068	52024656	chr1:52023068-52024656	0	-	52023068	52023068	8553170	2	506,147,	0,1441,
#Deleted in new
chr1	52032102	52033816	chr1:52032102-52033816	3	-	52032696	52033761	789624	1	1714,	0,
#Partially deleted in new
chr1	52033284	52055191	chr1:52033284-52055191	1	-	52034041	52055096	789624	3	767,61,192,	0,8252,21715,
#Partially deleted in new
chr1	52033390	52044279	chr1:52033390-52044279	3	+	52033390	52033390	8553170	2	435,327,	0,10562,
#Partially deleted in new
chr1	52050917	52052683	chr1:52050917-52052683	3	+	52050917	52050917	789624	3	48,66,277,	0,866,1489,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	52056124	52090716	chr1:52056124-52090716	3	+	52059847	52086758	789624	6	255,67,114,202,60,4005,	0,3710,8700,27215,29987,30587,
#Partially deleted in new
chr1	52056198	52086747	chr1:52056198-52086747	0	+	52059847	52060538	789624	7	181,67,232,114,202,60,36,	0,3636,4229,8626,27141,29913,30513,
#Partially deleted in new
chr1	52056270	52087155	chr1:52056270-52087155	1	+	52059847	52086720	789624	5	109,67,114,60,444,	0,3564,8554,29841,30441,
#Partially deleted in new
chr1	52056303	52088418	chr1:52056303-52088418	1	+	52083345	52086758	789624	5	76,114,202,60,1707,	0,8521,27036,29808,30408,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	52056313	52065299	chr1:52056313-52065299	0	+	52056313	52056313	8553170	3	66,67,475,	0,3521,8511,
#Partially deleted in new
chr1	52056320	52086610	chr1:52056320-52086610	1	+	52059847	52086179	789624	5	59,67,114,202,499,	0,3514,8504,27019,29791,
#Partially deleted in new
chr1	52056331	52083500	chr1:52056331-52083500	0	+	52056331	52056331	8553170	5	48,67,114,178,161,	0,3503,8493,14818,27008,
#Partially deleted in new
chr1	52142093	52346685	chr1:52142093-52346685	3	+	52233206	52346221	0	19	310,106,106,2108,100,177,170,121,123,156,225,83,105,151,81,163,106,177,626,	0,74275,91077,95394,121679,124561,126369,132370,136398,139567,151359,153801,161727,190674,192594,195678,198032,202674,203966,
#Partially deleted in new
chr1	52142373	52346515	chr1:52142373-52346515	1	+	52233206	52346221	0	18	30,106,106,2108,100,170,121,123,156,225,83,105,151,81,163,106,177,456,	0,73995,90797,95114,121399,126089,132090,136118,139287,151079,153521,161447,190394,192314,195398,197752,202394,203686,
#Partially deleted in new
chr1	52142373	52264047	chr1:52142373-52264047	0	+	52142373	52142373	8553170	5	30,106,106,2108,275,	0,73995,90797,95114,121399,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	52150103	52150419	chr1:52150103-52150419	3	+	52150103	52150103	8553170	1	316,	0,
#Partially deleted in new
chr1	52160260	52160600	chr1:52160260-52160600	7	-	52160260	52160260	16724991	1	340,	0,
#Deleted in new
chr1	52162185	52163026	chr1:52162185-52163026	7	-	52162185	52162185	16724991	1	841,	0,
#Deleted in new
chr1	52179847	52180553	chr1:52179847-52180553	7	+	52179847	52179847	16724991	1	706,	0,
#Deleted in new
chr1	52189915	52190309	chr1:52189915-52190309	7	-	52189915	52189915	16724991	1	394,	0,
#Partially deleted in new
chr1	52216379	52346686	chr1:52216379-52346686	1	+	52233206	52346221	0	18	95,106,2108,100,177,170,121,123,156,225,83,105,151,81,163,106,177,627,	0,16791,21108,47393,50275,52083,58084,62112,65281,77073,79515,87441,116388,118308,121392,123746,128388,129680,
#Partially deleted in new
chr1	52252061	52252773	chr1:52252061-52252773	7	-	52252061	52252061	16724991	2	238,106,	0,606,
#Partially deleted in new
chr1	52253620	52254176	chr1:52253620-52254176	7	+	52253620	52253620	16724991	1	556,	0,
#Partially deleted in new
chr1	52295894	52335207	chr1:52295894-52335207	0	+	52295894	52295894	8553170	4	83,105,151,520,	0,7926,36873,38793,
#Partially deleted in new
chr1	52345722	52354865	chr1:52345722-52354865	0	-	52345722	52345722	8553170	4	481,130,91,26,	0,7795,8885,9117,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr1	52350592	52366193	chr1:52350592-52366193	3	-	52353518	52364620	789624	24	3055,91,100,52,59,74,117,59,126,173,136,131,73,131,108,76,179,160,126,159,104,145,83,125,	0,4015,4247,4805,5015,5178,5593,5791,6408,6933,7188,7738,8093,8434,8657,8866,9112,9481,9831,10381,10920,12009,13959,15476,
#Partially deleted in new
chr1	52352531	52366179	chr1:52352531-52366179	1	-	52353518	52364620	789624	25	692,130,91,100,52,59,74,117,59,126,173,118,131,73,131,108,76,179,160,126,159,104,145,83,111,	0,986,2076,2308,2866,3076,3239,3654,3852,4469,4994,5249,5799,6154,6495,6718,6927,7173,7542,7892,8442,8981,10070,12020,13537,
#Partially deleted in new
chr1	52352531	52366156	chr1:52352531-52366156	0	-	52352531	52352531	8553170	24	692,130,90,91,100,52,59,74,117,59,126,173,681,73,131,108,76,179,160,709,139,145,83,88,	0,986,1833,2076,2308,2866,3076,3239,3654,3852,4469,4994,5249,6154,6495,6718,6927,7173,7542,7892,8946,10070,12020,13537,
#Partially deleted in new
chr1	52352537	52360196	chr1:52352537-52360196	0	-	52353172	52360196	789624	19	686,45,91,100,52,59,74,117,59,126,173,118,131,73,131,108,76,179,123,	0,1065,2070,2302,2860,3070,3233,3648,3846,4463,4988,5243,5793,6148,6489,6712,6921,7167,7536,
#Partially deleted in new
chr1	52353088	52361100	chr1:52353088-52361100	0	-	52353088	52353088	8553170	20	559,91,100,52,59,74,117,59,174,173,118,131,73,131,108,76,132,160,126,127,	0,1519,1751,2309,2519,2682,3097,3295,3912,4437,4692,5242,5597,5938,6161,6370,6616,6985,7335,7885,
#Deleted in new
chr1	52353486	52353877	chr1:52353486-52353877	3	+	52353486	52353486	8553170	1	391,	0,
#Partially deleted in new
chr1	52353518	52360548	chr1:52353518-52360548	0	-	52353518	52360548	789624	19	129,91,100,52,59,74,117,59,126,173,118,131,73,131,108,76,116,160,125,	0,1089,1321,1879,2089,2252,2667,2865,3482,4007,4262,4812,5167,5508,5731,5940,6186,6555,6905,
#Deleted in new
chr1	52353530	52355666	chr1:52353530-52355666	0	-	52353530	52353530	8553170	4	117,91,100,269,	0,1077,1309,1867,
#Deleted in new
chr1	52354654	52354965	chr1:52354654-52354965	0	-	52354654	52354654	8553170	2	44,126,	0,185,
#Deleted in new
chr1	52354886	52356560	chr1:52354886-52356560	0	-	52354886	52354886	8553170	6	53,52,59,74,117,177,	0,511,721,884,1299,1497,
#Deleted in new
chr1	52356254	52356813	chr1:52356254-52356813	0	-	52356254	52356254	8553170	3	48,59,59,	0,129,500,
#Deleted in new
chr1	52368676	52369244	chr1:52368676-52369244	7	+	52368676	52368676	16724991	1	568,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	52372828	52404459	chr1:52372828-52404459	3	-	52373180	52402223	0	17	547,88,170,120,150,108,172,102,98,196,105,361,319,179,128,100,214,	0,1981,2601,8813,10591,11001,11721,12332,13023,15613,16388,20614,23217,24856,28533,29300,31417,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	52372830	52404387	chr1:52372830-52404387	1	-	52373180	52402223	0	17	545,88,170,120,150,108,172,102,98,196,105,361,319,179,128,97,142,	0,1979,2599,8811,10589,10999,11719,12330,13021,15611,16386,20612,23215,24854,28531,29298,31415,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	52404563	52420839	chr1:52404563-52420839	3	+	52404749	52416690	0	10	316,160,122,86,111,113,27,98,49,4192,	0,1116,4005,6551,7950,9315,10057,10198,10774,12084,
#Partially deleted in new
chr1	52404619	52409074	chr1:52404619-52409074	0	+	52404619	52404619	8553170	3	260,160,506,	0,1060,3949,
#Partially deleted in new
chr1	52404627	52417022	chr1:52404627-52417022	0	+	52404627	52404627	8553170	8	252,34,111,113,27,98,49,375,	0,1052,7886,9251,9993,10134,10710,12020,
#Partially deleted in new
chr1	52408281	52431227	chr1:52408281-52431227	0	-	52408341	52431227	789624	3	179,159,215,	0,17067,22731,
#Partially deleted in new
chr1	52423274	52552982	chr1:52423274-52552982	3	-	52423934	52526280	789624	30	728,159,448,101,224,116,83,48,178,78,114,90,104,58,104,87,151,704,175,213,120,127,70,52,89,178,117,164,811,52,	0,2074,7738,12090,13480,14945,22512,22682,22990,23315,35061,37859,38238,38437,41795,44906,48677,51557,54433,58148,58529,65634,67457,70336,72152,73731,86321,92616,102288,129656,
#Partially deleted in new
chr1	52423274	52553100	chr1:52423274-52553100	1	-	52423934	52526280	789624	30	728,159,448,101,221,116,83,48,178,78,114,90,104,58,104,87,151,704,175,213,120,127,70,52,89,178,117,164,811,170,	0,2074,7738,12090,13480,14945,22512,22682,22990,23315,35061,37859,38238,38437,41795,44906,48677,51557,54433,58148,58529,65634,67457,70336,72152,73731,86321,92616,102288,129656,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	52423402	52434670	chr1:52423402-52434670	0	-	52423402	52423402	8553170	2	2105,3658,	0,7610,
#Partially deleted in new
chr1	52423562	52431438	chr1:52423562-52431438	0	-	52423934	52431438	789624	4	440,159,106,122,	0,1786,7450,7754,
#Partially deleted in new
chr1	52423635	52431081	chr1:52423635-52431081	0	-	52423824	52431081	789624	3	278,159,69,	0,1713,7377,
#Partially deleted in new
chr1	52431125	52446628	chr1:52431125-52446628	0	-	52431125	52446628	789624	9	98,144,101,209,116,83,48,178,39,	0,191,4239,5629,7094,14661,14831,15139,15464,
#Partially deleted in new
chr1	52431246	52446650	chr1:52431246-52446650	0	-	52431246	52446650	789624	8	214,101,209,116,83,48,178,61,	0,4118,5508,6973,14540,14710,15018,15343,
#Partially deleted in new
chr1	52431287	52437255	chr1:52431287-52437255	0	-	52431287	52431287	8553170	3	173,101,501,	0,4077,5467,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	52433088	52462912	chr1:52433088-52462912	0	-	52433088	52433088	8553170	3	2377,947,433,	0,3666,29391,
#Partially deleted in new
chr1	52445786	52553082	chr1:52445786-52553082	0	-	52445786	52526280	789624	23	83,48,178,78,114,90,104,58,104,87,151,704,175,120,127,70,52,89,178,117,164,811,152,	0,170,478,803,12549,15347,15726,15925,19283,22394,26165,29045,31921,36017,43122,44945,47824,49640,51219,63809,70104,79776,107144,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	52446264	52462090	chr1:52446264-52462090	0	-	52446264	52446264	8553170	6	178,78,114,90,104,379,	0,325,12071,14869,15248,15447,
#Partially deleted in new
chr1	52446399	52553458	chr1:52446399-52553458	0	-	52446399	52516049	789624	21	43,78,90,104,58,104,87,151,704,175,213,120,127,70,52,89,178,117,164,160,26,	0,190,14734,15113,15312,18670,21781,25552,28432,31308,35023,35404,42509,44332,47211,49027,50606,63196,69491,106531,107033,
#Deleted in new
chr1	52460956	52461716	chr1:52460956-52461716	0	-	52460956	52460956	8553170	2	267,204,	0,556,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	52462177	52525930	chr1:52462177-52525930	0	-	52462177	52462177	8553170	16	1600,104,87,151,704,175,213,120,127,70,52,89,178,117,164,368,	0,2892,6003,9774,12654,15530,19245,19626,26731,28554,31433,33249,34828,47418,53713,63385,
#Partially deleted in new
chr1	52464962	52468490	chr1:52464962-52468490	0	-	52464962	52464962	8553170	2	211,310,	0,3218,
#Partially deleted in new
chr1	52477737	52553069	chr1:52477737-52553069	0	-	52495482	52526280	789624	11	145,213,120,127,70,52,89,117,164,811,139,	0,3685,4066,11171,12994,15873,17689,31858,38153,47825,75193,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	52514777	52552994	chr1:52514777-52552994	1	-	52515842	52526280	789624	3	1277,811,64,	0,10785,38153,
#Partially deleted in new
chr1	52526049	52553487	chr1:52526049-52553487	0	-	52526049	52526280	789624	3	324,160,55,	0,26881,27383,
#Deleted in new
chr1	52554817	52555273	chr1:52554817-52555273	3	+	52554817	52554817	8553170	1	456,	0,
#Partially deleted in new
chr1	52573113	52573816	chr1:52573113-52573816	7	+	52573113	52573113	16724991	1	703,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	52602371	52609051	chr1:52602371-52609051	3	+	52602409	52608425	0	3	176,262,790,	0,4312,5890,
#Partially deleted in new
chr1	52602399	52607408	chr1:52602399-52607408	0	+	52602399	52602399	8553170	2	148,725,	0,4284,
#Partially deleted in new
chr1	52633343	52669121	chr1:52633343-52669121	0	+	52633343	52633343	789624	5	332,140,180,181,635,	0,9519,26057,34055,35143,
#Partially deleted in new
chr1	52633343	52657065	chr1:52633343-52657065	3	+	52633493	52657040	789624	3	332,140,276,	0,9519,23446,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	52633393	52669683	chr1:52633393-52669683	0	+	52633393	52633393	789624	6	282,93,140,180,181,1116,	0,6581,9469,26007,34005,35174,
#Partially deleted in new
chr1	52633592	52667688	chr1:52633592-52667688	0	+	52633592	52633592	8553170	3	83,140,290,	0,9270,33806,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	52684450	52698366	chr1:52684450-52698366	3	-	52687719	52698326	789624	3	3718,141,146,	0,8276,13770,
#Partially deleted in new
chr1	52687561	52698068	chr1:52687561-52698068	0	-	52687561	52687561	8553170	3	607,141,160,	0,5165,10347,
#Partially deleted in new
chr1	52709121	52709442	chr1:52709121-52709442	7	+	52709121	52709121	16724991	1	321,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	52714398	52714695	chr1:52714398-52714695	3	+	52714398	52714398	8553170	1	297,	0,
#Partially deleted in new
chr1	52726466	52816638	chr1:52726466-52816638	1	+	52726653	52805476	789624	14	217,166,755,141,177,65,100,51,162,48,54,198,53,107,	0,29991,44553,53386,58410,63536,69825,70267,75352,75625,79004,87069,87393,90065,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	52726508	52827342	chr1:52726508-52827342	3	+	52726653	52821629	789624	14	175,166,755,141,177,65,100,51,162,48,198,53,98,5904,	0,29949,44511,53344,58368,63494,69783,70225,75310,75583,87027,87351,90023,94930,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	52754321	52754462	chr1:52754321-52754462	3	+	52754321	52754321	8553170	1	141,	0,
#Deleted in new
chr1	52772193	52772648	chr1:52772193-52772648	7	-	52772193	52772193	16724991	1	455,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	52805107	52805212	chr1:52805107-52805212	3	-	52805107	52805107	8553170	1	105,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	52842510	52894998	chr1:52842510-52894998	1	+	52860748	52892957	789624	13	463,166,141,177,65,100,51,162,45,195,62,98,2217,	0,11954,18220,21470,23992,25028,25216,35171,35414,38960,43322,44445,50271,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	52842510	52894991	chr1:52842510-52894991	1	+	52860748	52892957	789624	14	463,166,141,177,65,100,51,162,45,195,62,98,1009,948,	0,11954,18220,21470,23992,25028,25216,35171,35414,38960,43322,44445,50271,51533,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	52842735	52894998	chr1:52842735-52894998	3	+	52842883	52892957	789624	14	238,166,752,141,177,65,100,51,162,45,195,62,98,2217,	0,11729,14262,17995,21245,23767,24803,24991,34946,35189,38735,43097,44220,50046,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	52881215	52881730	chr1:52881215-52881730	3	-	52881215	52881215	8553170	2	249,131,	0,384,
#Partially deleted in new
chr1	52895909	52921774	chr1:52895909-52921774	1	-	52896519	52921673	789624	8	688,48,188,57,87,88,68,222,	0,1527,8736,9124,11958,15656,15813,25643,
#Partially deleted in new
chr1	52895983	52921767	chr1:52895983-52921767	3	-	52896519	52921673	789624	10	614,48,51,188,57,93,87,88,68,215,	0,1453,3190,8662,9050,10535,11884,15582,15739,25569,
#Partially deleted in new
chr1	52896222	52921762	chr1:52896222-52921762	0	-	52896222	52896222	8553170	8	375,51,188,1578,87,88,68,210,	0,2951,8423,8811,11645,15343,15500,25330,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	52896224	52902041	chr1:52896224-52902041	0	-	52896224	52896224	8553170	1	5817,	0,
#Partially deleted in new
chr1	52896231	52921703	chr1:52896231-52921703	0	-	52914088	52921673	789624	10	366,48,51,188,57,87,88,299,201,221,	0,1205,2942,8414,8802,11636,15334,15491,17663,25251,
#Partially deleted in new
chr1	52896231	52911676	chr1:52896231-52911676	0	-	52896231	52896231	8553170	5	366,48,51,87,111,	0,1205,2942,11636,15334,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	52896231	52904847	chr1:52896231-52904847	0	-	52896231	52896231	8553170	3	366,1788,202,	0,1205,8414,
#Partially deleted in new
chr1	52896231	52911655	chr1:52896231-52911655	0	-	52896231	52896231	8553170	4	366,48,51,90,	0,1205,2942,15334,
#Partially deleted in new
chr1	52896232	52921726	chr1:52896232-52921726	1	-	52896519	52921673	789624	9	365,48,51,188,57,87,88,68,174,	0,1204,2941,8413,8801,11635,15333,15490,25320,
#Partially deleted in new
chr1	52896238	52905172	chr1:52896238-52905172	0	-	52896238	52896238	8553170	4	359,48,51,527,	0,1198,2935,8407,
#Partially deleted in new
chr1	52896402	52927179	chr1:52896402-52927179	0	-	52915266	52921673	789624	13	195,48,51,188,57,93,87,88,68,201,162,367,71,	0,1034,2771,8243,8631,10116,11465,15163,15320,17492,18728,25150,30706,
#Partially deleted in new
chr1	52896547	52913930	chr1:52896547-52913930	0	-	52896547	52896547	8553170	10	50,48,51,188,57,93,87,88,68,36,	0,889,2626,8098,8486,9971,11320,15018,15175,17347,
#Partially deleted in new
chr1	52897436	52921718	chr1:52897436-52921718	0	-	52897436	52921673	789624	7	48,188,57,87,88,68,166,	0,7209,7597,10431,14129,14286,24116,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	52899173	52912830	chr1:52899173-52912830	0	-	52899173	52899173	8553170	8	51,188,57,93,87,88,299,77,	0,5472,5860,7345,8694,12392,12549,13580,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	52899176	52907101	chr1:52899176-52907101	0	-	52899176	52899176	8553170	5	48,188,57,93,88,	0,5469,5857,7342,7837,
#Partially deleted in new
chr1	52904788	52914077	chr1:52904788-52914077	0	-	52904788	52904788	8553170	5	45,87,88,68,183,	0,3079,6777,6934,9106,
#Partially deleted in new
chr1	52907311	52921532	chr1:52907311-52921532	0	-	52907311	52907311	8553170	5	338,87,88,68,50,	0,556,4254,4411,14171,
#Partially deleted in new
chr1	52907447	52927212	chr1:52907447-52927212	0	-	52914066	52921673	789624	6	507,88,68,201,367,104,	0,4118,4275,6447,14105,19661,
#Partially deleted in new
chr1	52907598	52921714	chr1:52907598-52921714	0	-	52907598	52907598	8553170	5	51,87,88,68,162,	0,269,3967,4124,13954,
#Partially deleted in new
chr1	52907838	52911888	chr1:52907838-52911888	0	-	52907838	52907838	8553170	3	116,88,166,	0,3727,3884,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	52911563	52921515	chr1:52911563-52921515	0	-	52911563	52911563	8553170	5	90,299,96,201,118,	0,159,1190,2331,9834,
#Partially deleted in new
chr1	52911563	52921586	chr1:52911563-52921586	0	-	52911563	52911563	8553170	4	90,68,201,189,	0,159,2331,9834,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	52911598	52913344	chr1:52911598-52913344	0	-	52911598	52911598	8553170	3	55,68,591,	0,124,1155,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	52911599	52912225	chr1:52911599-52912225	0	-	52911599	52911599	8553170	2	54,503,	0,123,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	52913419	52921785	chr1:52913419-52921785	0	-	52917604	52921673	789624	3	676,72,233,	0,4124,8133,
#Partially deleted in new
chr1	52913719	52921721	chr1:52913719-52921721	0	-	52913719	52913719	8553170	2	376,169,	0,7833,
#Deleted in new
chr1	52920421	52920596	chr1:52920421-52920596	7	+	52920421	52920421	16724991	1	175,	0,
#Deleted in new
chr1	52925248	52925423	chr1:52925248-52925423	7	-	52925248	52925248	16724991	1	175,	0,
#Partially deleted in new
chr1	52927228	53051703	chr1:52927228-53051703	3	+	52927396	53050704	0	16	237,58,72,132,65,127,64,87,151,148,108,154,103,130,80,1095,	0,14567,20780,23526,27511,34274,47540,49454,50988,53167,60800,87661,100740,111688,120629,123380,
#Partially deleted in new
chr1	52927276	53051401	chr1:52927276-53051401	0	+	52927396	52993277	789624	17	189,58,72,132,65,127,64,87,151,148,108,2743,154,103,130,80,793,	0,14519,20732,23478,27463,34226,47492,49406,50940,53119,60752,65981,87613,100692,111640,120581,123332,
#Partially deleted in new
chr1	52927285	53050970	chr1:52927285-53050970	1	+	52927396	53050704	0	15	180,58,72,65,127,64,87,151,148,108,154,103,130,80,362,	0,14510,20723,27454,34217,47483,49397,50931,53110,60743,87604,100683,111631,120572,123323,
#Partially deleted in new
chr1	52927285	53051260	chr1:52927285-53051260	1	+	52927396	53050704	0	15	180,58,132,65,127,64,87,151,148,108,154,103,130,80,652,	0,14510,23469,27454,34217,47483,49397,50931,53110,60743,87604,100683,111631,120572,123323,
#Partially deleted in new
chr1	52927285	53050903	chr1:52927285-53050903	1	+	52950798	53050704	0	15	180,72,132,65,127,64,87,151,148,108,154,103,130,80,295,	0,20723,23469,27454,34217,47483,49397,50931,53110,60743,87604,100683,111631,120572,123323,
#Partially deleted in new
chr1	52927317	52994232	chr1:52927317-52994232	1	+	52927396	52993277	0	11	148,58,72,65,127,64,87,151,148,108,975,	0,14478,20691,27422,34185,47451,49365,50899,53078,60711,65940,
#Partially deleted in new
chr1	52927379	52976712	chr1:52927379-52976712	0	+	52927379	52927379	8553170	7	86,58,72,132,65,127,30,	0,14416,20629,23375,27360,34123,49303,
#Partially deleted in new
chr1	52927396	52993277	chr1:52927396-52993277	1	+	52927396	52993277	789624	12	69,58,72,132,65,127,64,87,151,148,108,20,	0,14399,20612,23358,27343,34106,47372,49286,50820,52999,60632,65861,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	52928673	52928772	chr1:52928673-52928772	3	+	52928673	52928673	5263520	1	99,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	52934929	52935017	chr1:52934929-52935017	3	+	52934929	52934929	5263520	1	88,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	52940313	52940413	chr1:52940313-52940413	3	+	52940313	52940313	5263520	1	100,	0,
#Partially deleted in new
chr1	52941802	52980453	chr1:52941802-52980453	0	+	52941802	52980453	789624	8	51,72,132,65,127,64,151,58,	0,6206,8952,12937,19700,32966,36414,38593,
#Partially deleted in new
chr1	52943535	52943930	chr1:52943535-52943930	7	-	52943535	52943535	16724991	1	395,	0,
#Partially deleted in new
chr1	52963640	52988080	chr1:52963640-52988080	0	+	52963640	52963640	8553170	6	80,64,87,151,148,52,	0,11128,13042,14576,16755,24388,
#Deleted in new
chr1	52993200	52993702	chr1:52993200-52993702	7	-	52993200	52993200	16724991	1	502,	0,
#Deleted in new
chr1	52994725	52996026	chr1:52994725-52996026	7	+	52994725	52994725	16724991	1	1301,	0,
#Partially deleted in new
chr1	53014927	53051126	chr1:53014927-53051126	1	+	53015020	53050704	0	5	116,94,130,80,518,	0,13050,23989,32930,35681,
#Partially deleted in new
chr1	53014937	53051617	chr1:53014937-53051617	1	+	53015020	53047911	0	4	106,103,80,1009,	0,13031,32920,35671,
#Partially deleted in new
chr1	53014965	53048515	chr1:53014965-53048515	0	+	53014965	53047967	789624	4	78,103,130,658,	0,13003,23951,32892,
#Partially deleted in new
chr1	53014965	53051018	chr1:53014965-53051018	0	+	53014965	53047911	789624	4	78,103,80,410,	0,13003,32892,35643,
#Partially deleted in new
chr1	53014965	53051062	chr1:53014965-53051062	0	+	53014965	53038935	789624	4	78,130,80,454,	0,23951,32892,35643,
#Partially deleted in new
chr1	53014967	53051113	chr1:53014967-53051113	1	+	53015020	53050704	0	5	76,103,130,80,505,	0,13001,23949,32890,35641,
#Partially deleted in new
chr1	53014973	53051610	chr1:53014973-53051610	1	+	53015020	53047911	0	3	70,103,3753,	0,12995,32884,
#Partially deleted in new
chr1	53062051	53085501	chr1:53062051-53085501	1	+	53062219	53082161	789624	7	257,367,116,658,149,208,989,	0,7749,15633,16313,18676,19929,22461,
#Partially deleted in new
chr1	53062181	53085502	chr1:53062181-53085502	1	+	53066835	53082161	789624	13	127,190,56,367,94,65,110,157,116,658,149,208,990,	0,1188,4630,7619,9353,12424,13680,15008,15503,16183,18546,19799,22331,
#Partially deleted in new
chr1	53062212	53085502	chr1:53062212-53085502	3	+	53062219	53082161	789624	11	96,367,94,65,110,157,116,658,149,208,990,	0,7588,9322,12393,13649,14977,15472,16152,18515,19768,22300,
#Partially deleted in new
chr1	53062212	53085501	chr1:53062212-53085501	1	+	53066835	53082161	789624	12	96,56,367,94,65,110,157,116,658,149,208,989,	0,4599,7588,9322,12393,13649,14977,15472,16152,18515,19768,22300,
#Partially deleted in new
chr1	53069937	53085502	chr1:53069937-53085502	3	-	53069937	53069937	8553170	2	99,368,	0,15197,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	53070908	53073754	chr1:53070908-53073754	0	+	53070908	53070908	8553170	2	720,822,	0,2024,
#Deleted in new
chr1	53073109	53073389	chr1:53073109-53073389	7	-	53073109	53073109	16724991	1	280,	0,
#Partially deleted in new
chr1	53078610	53082094	chr1:53078610-53082094	0	+	53078610	53078610	8553170	3	412,184,114,	0,2082,3370,
#Partially deleted in new
chr1	53078649	53082188	chr1:53078649-53082188	0	+	53078649	53078649	8553170	3	373,71,208,	0,2156,3331,
#Partially deleted in new
chr1	53087178	53142604	chr1:53087178-53142604	1	-	53088075	53142449	789624	10	1068,103,135,195,234,100,223,43,80,290,	0,1698,2621,3433,5375,6282,16167,18553,47171,55136,
#Partially deleted in new
chr1	53087182	53142577	chr1:53087182-53142577	3	-	53088008	53142449	789624	11	1045,103,135,195,234,100,223,43,216,80,263,	0,1694,2617,3429,5371,6278,16163,18549,27575,47167,55132,
#Partially deleted in new
chr1	53087183	53090982	chr1:53087183-53090982	0	-	53087183	53087183	8553170	3	1044,103,1183,	0,1693,2616,
#Partially deleted in new
chr1	53087183	53142621	chr1:53087183-53142621	0	-	53103614	53142449	789624	8	1044,234,100,1354,43,216,80,307,	0,5370,6277,15080,18548,27574,47166,55131,
#Partially deleted in new
chr1	53087183	53142632	chr1:53087183-53142632	0	-	53088959	53142449	789624	11	1044,103,135,167,234,100,223,43,216,80,318,	0,1693,2616,3428,5370,6277,16162,18548,27574,47166,55131,
#Partially deleted in new
chr1	53087519	53142577	chr1:53087519-53142577	1	-	53088008	53142449	789624	11	708,103,135,372,234,100,223,43,216,80,263,	0,1357,2280,3092,5034,5941,15826,18212,27238,46830,54795,
#Partially deleted in new
chr1	53107927	53142617	chr1:53107927-53142617	1	-	53108588	53142449	789624	4	707,216,80,303,	0,6830,26422,34387,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	53114575	53118609	chr1:53114575-53118609	3	+	53114575	53114575	8553170	2	1657,214,	0,3820,
#Partially deleted in new
chr1	53180920	53186900	chr1:53180920-53186900	7	+	53180920	53180920	16724991	2	102,616,	0,5364,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	53196428	53214197	chr1:53196428-53214197	3	+	53196943	53213595	789624	5	667,81,107,1305,934,	0,4290,5894,13586,16835,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	53196791	53214178	chr1:53196791-53214178	1	+	53196943	53213595	789624	5	304,81,107,1236,915,	0,3927,5531,13223,16472,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	53196799	53214160	chr1:53196799-53214160	0	+	53196943	53210027	789624	4	296,81,1305,897,	0,3919,13215,16464,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	53196799	53214170	chr1:53196799-53214170	1	+	53196943	53213365	789624	5	296,81,107,1355,907,	0,3919,5523,13215,16464,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	53196799	53214177	chr1:53196799-53214177	1	+	53196943	53213595	789624	6	296,81,107,1305,36,914,	0,3919,5523,13215,15981,16464,
#Partially deleted in new
chr1	53196812	53213595	chr1:53196812-53213595	1	+	53196943	53213595	789624	4	283,81,107,332,	0,3906,5510,16451,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	53196819	53213846	chr1:53196819-53213846	1	+	53196943	53213595	789624	6	276,81,107,1236,36,583,	0,3899,5503,13195,15961,16444,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	53196819	53214178	chr1:53196819-53214178	0	+	53196943	53197369	789624	6	276,205,81,107,1305,915,	0,483,3899,5503,13195,16444,
#Partially deleted in new
chr1	53196858	53202776	chr1:53196858-53202776	0	+	53196858	53196858	8553170	3	237,81,454,	0,3860,5464,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	53196902	53214170	chr1:53196902-53214170	0	+	53196943	53210027	789624	3	193,1305,907,	0,13112,16361,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	53199776	53204315	chr1:53199776-53204315	0	+	53199776	53199776	8553170	1	4539,	0,
#Duplicated in new
chr1	53207474	53211545	chr1:53207474-53211545	0	+	53207474	53207474	8553170	1	4071,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	53209782	53213472	chr1:53209782-53213472	0	-	53209782	53209782	8553170	3	430,120,285,	0,507,3405,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	53210455	53213775	chr1:53210455-53213775	3	-	53210455	53210455	8553170	2	89,435,	0,2885,
#Partially deleted in new
chr1	53214098	53220617	chr1:53214098-53220617	3	-	53214658	53220575	789624	8	638,66,78,32,82,57,84,48,	0,1892,2683,4073,4315,4768,6162,6471,
#Partially deleted in new
chr1	53214136	53219920	chr1:53214136-53219920	0	-	53214136	53214136	8553170	6	600,66,78,32,82,1054,	0,1854,2645,4035,4277,4730,
#Partially deleted in new
chr1	53214374	53220592	chr1:53214374-53220592	0	-	53214374	53214374	8553170	7	362,66,78,32,82,57,332,	0,1616,2407,3797,4039,4492,5886,
#Partially deleted in new
chr1	53214473	53218360	chr1:53214473-53218360	0	-	53214473	53214473	8553170	3	263,66,1579,	0,1517,2308,
#Deleted in new
chr1	53216785	53219027	chr1:53216785-53219027	0	-	53216785	53216785	8553170	3	74,32,614,	0,1386,1628,
#Deleted in new
chr1	53219534	53220600	chr1:53219534-53220600	0	-	53219534	53219534	8553170	2	810,31,	0,1035,
#Deleted in new
chr1	53220086	53220576	chr1:53220086-53220576	0	-	53220086	53220086	8553170	1	490,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	53220662	53224253	chr1:53220662-53224253	3	+	53220662	53220662	8553170	1	3591,	0,
#Partially deleted in new
chr1	53226891	53238610	chr1:53226891-53238610	3	-	53227044	53238448	0	5	253,83,111,59,250,	0,1980,6650,8685,11469,
#Partially deleted in new
chr1	53226925	53238499	chr1:53226925-53238499	1	-	53227044	53238448	0	4	219,83,59,139,	0,1946,8651,11435,
#Partially deleted in new
chr1	53226930	53233939	chr1:53226930-53233939	0	-	53226930	53226930	8553170	3	214,83,398,	0,1941,6611,
#Partially deleted in new
chr1	53233121	53238508	chr1:53233121-53238508	0	-	53233121	53233121	8553170	3	531,59,148,	0,2455,5239,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	53238609	53242783	chr1:53238609-53242783	3	+	53238609	53238609	789624	3	736,99,346,	0,3237,3828,
#Partially deleted in new
chr1	53242363	53328014	chr1:53242363-53328014	3	-	53247017	53327912	0	19	4693,177,173,69,225,153,142,140,119,228,175,126,120,123,387,129,123,120,226,	0,7016,8326,12753,14876,15955,18100,19704,20082,21805,24109,28664,28863,33267,34328,38223,47203,84509,85425,
#Partially deleted in new
chr1	53245748	53257323	chr1:53245748-53257323	0	-	53247017	53257323	789624	5	233,101,173,69,84,	0,1207,4941,9368,11491,
#Partially deleted in new
chr1	53246552	53328054	chr1:53246552-53328054	1	-	53247017	53327912	0	18	504,173,69,225,153,142,140,119,228,175,126,120,123,387,129,123,120,266,	0,4137,8564,10687,11766,13911,15515,15893,17616,19920,24475,24674,29078,30139,34034,43014,80320,81236,
#Partially deleted in new
chr1	53246567	53327912	chr1:53246567-53327912	1	-	53247017	53327912	0	16	489,173,69,153,142,140,119,228,175,126,120,123,129,123,120,124,	0,4122,8549,11751,13896,15500,15878,17601,19905,24460,24659,29063,34019,42999,80305,81221,
#Partially deleted in new
chr1	53246567	53327399	chr1:53246567-53327399	1	-	53247017	53266558	789624	16	489,173,69,225,153,142,140,119,228,175,120,123,129,123,120,142,	0,4122,8549,10672,11751,13896,15500,15878,17601,19905,24659,29063,34019,42999,80305,80690,
#Partially deleted in new
chr1	53246957	53328070	chr1:53246957-53328070	0	-	53271294	53327912	789624	20	99,177,173,69,225,153,142,140,119,228,175,126,120,121,123,387,129,123,120,282,	0,2422,3732,8159,10282,11361,13506,15110,15488,17211,19515,24070,24269,27742,28673,29734,33629,42609,79915,80831,
#Partially deleted in new
chr1	53247017	53327912	chr1:53247017-53327912	1	-	53247017	53327912	0	17	39,177,173,69,225,153,142,140,119,228,175,126,120,129,123,120,124,	0,2362,3672,8099,10222,11301,13446,15050,15428,17151,19455,24010,24209,33569,42549,79855,80771,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	53250764	53268598	chr1:53250764-53268598	0	-	53250764	53250764	8553170	9	98,69,225,153,142,140,119,228,2126,	0,4352,6475,7554,9699,11303,11681,13404,15708,
#Partially deleted in new
chr1	53257242	53262497	chr1:53257242-53262497	0	-	53257242	53257242	8553170	6	222,66,153,142,140,52,	0,766,1076,3221,4825,5203,
#Partially deleted in new
chr1	53260463	53266589	chr1:53260463-53266589	0	-	53262146	53266589	789624	4	142,140,228,117,	0,1604,3705,6009,
#Partially deleted in new
chr1	53264168	53275663	chr1:53264168-53275663	0	-	53264168	53275663	789624	6	228,175,126,120,39,33,	0,2304,6859,7058,8435,11462,
#Deleted in new
chr1	53267934	53268601	chr1:53267934-53268601	3	+	53267934	53267934	8553170	2	80,390,	0,277,
#Deleted in new
chr1	53271226	53275753	chr1:53271226-53275753	0	-	53271226	53275753	8553170	3	120,126,123,	0,3468,4404,
#Deleted in new
chr1	53288023	53289706	chr1:53288023-53289706	3	+	53288023	53288023	8553170	2	409,266,	0,1417,
#Partially deleted in new
chr1	53289331	53327817	chr1:53289331-53327817	0	-	53289331	53289331	8553170	3	358,120,29,	0,37541,38457,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	53291790	53292138	chr1:53291790-53292138	3	-	53291790	53291790	8553170	2	127,110,	0,238,
#Deleted in new
chr1	53304535	53307462	chr1:53304535-53307462	3	+	53304535	53304535	8553170	6	90,167,147,123,105,120,	0,461,742,1247,1551,2807,
#Partially deleted in new
chr1	53344030	53365473	chr1:53344030-53365473	3	+	53344030	53344030	8553170	4	116,332,94,344,	0,4928,8687,21099,
#Partially deleted in new
chr1	53348487	53349233	chr1:53348487-53349233	3	-	53348487	53348487	8553170	2	143,240,	0,506,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	53366667	53368245	chr1:53366667-53368245	3	-	53366667	53366667	8553170	2	610,240,	0,1338,
#Partially deleted in new
chr1	53413148	53439975	chr1:53413148-53439975	7	-	53413148	53413148	16724991	3	120,139,201,	0,4379,26626,
#Deleted in new
chr1	53413162	53417666	chr1:53413162-53417666	4	-	53413162	53413162	16724991	3	106,124,139,	0,2238,4365,
#Deleted in new
chr1	53437034	53439565	chr1:53437034-53439565	4	-	53437034	53437034	16724991	1	2531,	0,
#Deleted in new
chr1	53438369	53440020	chr1:53438369-53440020	5	-	53438369	53438369	16724991	2	679,246,	0,1405,
#Deleted in new
chr1	53438370	53439301	chr1:53438370-53439301	5	-	53438370	53438370	16724991	1	931,	0,
#Deleted in new
chr1	53438710	53439569	chr1:53438710-53439569	4	-	53438710	53438710	16724991	2	338,143,	0,716,
#Partially deleted in new
chr1	53459398	53467488	chr1:53459398-53467488	3	+	53459453	53466662	789624	4	632,173,211,894,	0,2074,5238,7196,
#Partially deleted in new
chr1	53459975	53464679	chr1:53459975-53464679	0	+	53459975	53459975	8553170	3	585,173,43,	0,1497,4661,
#Partially deleted in new
chr1	53506236	53734204	chr1:53506236-53734204	3	-	53506618	53594902	789624	10	540,168,179,157,133,111,162,883,178,301,	0,2883,3612,8388,14397,18540,23554,87871,93864,227667,
#Partially deleted in new
chr1	53506241	53738106	chr1:53506241-53738106	1	-	53506618	53738064	789624	10	535,168,179,157,133,111,162,883,178,301,	0,2878,3607,8383,14392,18535,23549,87866,93859,231564,
#Deleted in new
chr1	53688748	53688812	chr1:53688748-53688812	3	-	53688748	53688748	8553170	1	64,	0,
#Partially deleted in new
chr1	53765459	53838860	chr1:53765459-53838860	3	-	53767969	53838261	789624	18	2574,161,101,64,51,116,246,156,82,93,136,52,109,139,175,102,121,656,	0,6869,21698,23673,27769,31229,31439,35233,38468,40965,42196,44235,53511,60338,62539,67030,70040,72745,
#Deleted in new
chr1	53771017	53771153	chr1:53771017-53771153	3	-	53771017	53771017	8553170	1	136,	0,
#Partially deleted in new
chr1	53818969	53838463	chr1:53818969-53838463	0	-	53818969	53818969	8553170	5	110,139,175,102,259,	0,6828,9029,13520,19235,
#Deleted in new
chr1	53841546	53841832	chr1:53841546-53841832	7	+	53841546	53841546	16724991	1	286,	0,
#Partially deleted in new
chr1	53851718	53889733	chr1:53851718-53889733	0	-	53860063	53888937	789624	11	552,51,98,183,167,117,88,81,164,80,21,	0,3282,8337,14481,15039,19653,26596,26923,31394,37188,37994,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	53851732	53889834	chr1:53851732-53889834	3	-	53860063	53888937	789624	11	538,98,183,167,117,88,81,164,80,220,122,	0,8323,14467,15025,19639,26582,26909,31380,37174,37511,37980,
#Partially deleted in new
chr1	53851732	53889779	chr1:53851732-53889779	1	-	53860063	53866856	789624	9	538,98,183,167,117,88,81,164,67,	0,8323,14467,15025,19639,26582,26909,31380,37980,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	53866194	53889780	chr1:53866194-53889780	0	-	53866194	53866194	8553170	8	188,167,117,88,81,80,220,68,	0,563,5177,12120,12447,22712,23049,23518,
#Partially deleted in new
chr1	53866200	53889798	chr1:53866200-53889798	0	-	53866200	53866200	8553170	8	182,167,117,88,81,164,55,86,	0,557,5171,12114,12441,16912,20466,23512,
#Partially deleted in new
chr1	53866803	53889780	chr1:53866803-53889780	0	-	53866803	53866803	8553170	8	121,117,88,81,89,164,80,68,	0,4568,11511,11838,16139,16309,22103,22909,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	53878321	53889789	chr1:53878321-53889789	0	-	53878321	53878321	8553170	7	81,81,89,164,80,220,77,	0,320,4621,4791,10585,10922,11391,
#Partially deleted in new
chr1	53891238	53906160	chr1:53891238-53906160	0	+	53891238	53891238	8553170	5	56,234,210,144,66,	0,3075,11818,13427,14856,
#Partially deleted in new
chr1	53892166	53906294	chr1:53892166-53906294	0	+	53894339	53906294	789624	4	110,234,144,200,	0,2147,12499,13928,
#Partially deleted in new
chr1	53894186	53911086	chr1:53894186-53911086	3	+	53894210	53909999	789624	4	361,144,200,1156,	0,10479,11908,15744,
#Partially deleted in new
chr1	53894187	53911084	chr1:53894187-53911084	1	+	53894210	53909935	789624	3	360,144,1154,	0,10478,15743,
#Partially deleted in new
chr1	53894187	53911085	chr1:53894187-53911085	1	+	53894210	53909999	789624	5	360,38,103,200,1155,	0,10478,10519,11907,15743,
#Partially deleted in new
chr1	53894187	53911085	chr1:53894187-53911085	1	+	53894210	53909935	789624	4	360,38,103,1155,	0,10478,10519,15743,
#Partially deleted in new
chr1	53894188	53910109	chr1:53894188-53910109	0	+	53894210	53904686	789624	3	250,144,179,	0,10477,15742,
#Partially deleted in new
chr1	53894188	53910109	chr1:53894188-53910109	0	+	53894210	53894470	789624	5	167,109,144,200,179,	0,250,10477,11906,15742,
#Partially deleted in new
chr1	53894188	53910109	chr1:53894188-53910109	0	+	53894210	53904750	789624	3	359,76,179,	0,10545,15742,
#Partially deleted in new
chr1	53894188	53910107	chr1:53894188-53910107	0	+	53894210	53904686	789624	4	250,144,200,177,	0,10477,11906,15742,
#Partially deleted in new
chr1	53894188	53910109	chr1:53894188-53910109	1	+	53894210	53904669	789624	6	167,29,77,144,200,179,	0,250,282,10477,11906,15742,
#Partially deleted in new
chr1	53894191	53904854	chr1:53894191-53904854	0	+	53894191	53894191	8553170	2	356,189,	0,10474,
#Partially deleted in new
chr1	53894210	53909999	chr1:53894210-53909999	1	+	53894210	53909999	789624	3	337,200,69,	0,11884,15720,
#Partially deleted in new
chr1	53894210	53909999	chr1:53894210-53909999	1	+	53904715	53909999	789624	5	76,137,144,200,69,	0,200,10455,11884,15720,
#Partially deleted in new
chr1	53894210	53909999	chr1:53894210-53909999	1	+	53894210	53909999	789624	4	145,144,200,69,	0,10455,11884,15720,
#Partially deleted in new
chr1	53894210	53909999	chr1:53894210-53909999	0	+	53894210	53894470	789624	4	145,109,200,69,	0,228,11884,15720,
#Partially deleted in new
chr1	53894210	53909999	chr1:53894210-53909999	1	+	53894210	53909935	789624	2	337,69,	0,15720,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	53916573	53945572	chr1:53916573-53945572	1	-	53916789	53940082	789624	6	543,44,69,107,113,18,	0,7330,11798,13465,23411,28981,
#Partially deleted in new
chr1	53921560	53945929	chr1:53921560-53945929	3	-	53921650	53940082	0	6	207,44,69,107,113,375,	0,2343,6811,8478,18424,23994,
#Partially deleted in new
chr1	53921561	53929000	chr1:53921561-53929000	0	-	53921561	53921561	8553170	3	206,44,629,	0,2342,6810,
#Partially deleted in new
chr1	53923532	53945610	chr1:53923532-53945610	1	-	53923882	53940082	789624	5	415,69,107,113,56,	0,4839,6506,16452,22022,
#Partially deleted in new
chr1	53929496	53940100	chr1:53929496-53940100	1	-	53930018	53940082	789624	2	649,116,	0,10488,
#Partially deleted in new
chr1	53939682	53945602	chr1:53939682-53945602	0	-	53939682	53939682	8553170	2	415,48,	0,5872,
#Partially deleted in new
chr1	53946076	53968168	chr1:53946076-53968168	3	+	53951999	53967939	789624	9	473,34,487,132,119,89,114,85,504,	0,1711,5909,12072,14279,15957,16219,20219,21588,
#Partially deleted in new
chr1	53946084	53958252	chr1:53946084-53958252	0	+	53951999	53958252	789624	5	26,101,120,487,104,	0,364,1777,5901,12064,
#Partially deleted in new
chr1	53946352	53968168	chr1:53946352-53968168	1	+	53951999	53967939	789624	8	197,487,132,119,89,114,85,504,	0,5633,11796,14003,15681,15943,19943,21312,
#Partially deleted in new
chr1	53946357	53960468	chr1:53946357-53960468	0	+	53951999	53960468	789624	5	192,120,487,132,113,	0,1504,5628,11791,13998,
#Partially deleted in new
chr1	53961952	53967733	chr1:53961952-53967733	0	+	53961952	53961952	8553170	3	457,85,69,	0,4343,5712,
#Deleted in new
chr1	53974968	53976031	chr1:53974968-53976031	7	-	53974968	53974968	16724991	1	1063,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	54007298	54018186	chr1:54007298-54018186	1	-	54008981	54018176	789624	4	1832,129,138,95,	0,2983,4844,10793,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	54007298	54018186	chr1:54007298-54018186	1	-	54008981	54018112	789624	5	1832,129,138,52,95,	0,2983,4844,10077,10793,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	54008738	54018172	chr1:54008738-54018172	1	-	54008981	54018112	789624	4	392,129,52,81,	0,1543,8637,9353,
#Partially deleted in new
chr1	54008832	54018130	chr1:54008832-54018130	3	-	54008981	54018112	789624	6	298,129,138,129,52,39,	0,1449,3310,5403,8543,9259,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	54026680	54053438	chr1:54026680-54053438	3	-	54032149	54053188	789624	8	5625,109,82,82,153,95,106,439,	0,9929,14075,15043,16692,19011,20586,26319,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	54031662	54048013	chr1:54031662-54048013	1	-	54032149	54043522	789624	7	643,109,82,82,153,95,747,	0,4947,9093,10061,11710,14029,15604,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	54031675	54044942	chr1:54031675-54044942	1	-	54032149	54043522	789624	5	630,109,82,82,1570,	0,4934,9080,10048,11697,
#Partially deleted in new
chr1	54031965	54053504	chr1:54031965-54053504	1	-	54032149	54043522	789624	8	340,109,82,82,153,95,106,149,	0,4644,8790,9758,11407,13726,15301,21390,
#Partially deleted in new
chr1	54032018	54036802	chr1:54032018-54036802	0	-	54032018	54032018	8553170	2	287,193,	0,4591,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	54033125	54034880	chr1:54033125-54034880	3	-	54033125	54033125	8553170	1	1755,	0,
#Partially deleted in new
chr1	54036598	54053412	chr1:54036598-54053412	0	-	54036598	54043522	789624	8	120,82,82,153,95,106,33,57,	0,4157,5125,6774,9093,10668,12051,16757,
#Partially deleted in new
chr1	54036598	54053441	chr1:54036598-54053441	0	-	54036598	54043522	789624	6	120,82,82,153,95,86,	0,4157,5125,6774,9093,16757,
#Partially deleted in new
chr1	54036601	54053405	chr1:54036601-54053405	0	-	54036601	54053188	789624	8	117,82,82,153,95,106,33,406,	0,4154,5122,6771,9090,10665,12048,16398,
#Partially deleted in new
chr1	54045485	54053192	chr1:54045485-54053192	1	-	54045643	54053188	789624	3	301,106,193,	0,1781,7514,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	54053583	54112504	chr1:54053583-54112504	0	+	54054422	54096473	8553170	6	175,144,142,194,560,1453,	0,797,15172,35013,42701,57468,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	54053586	54112519	chr1:54053586-54112519	0	+	54053586	54053586	789624	5	172,144,194,560,1468,	0,794,35010,42698,57465,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	54053600	54106082	chr1:54053600-54106082	3	+	54054422	54096473	789624	5	158,144,142,194,9798,	0,780,15155,34996,42684,
#Partially deleted in new
chr1	54054078	54054154	chr1:54054078-54054154	3	+	54054078	54054078	5263520	1	76,	0,
#Partially deleted in new
chr1	54054133	54096493	chr1:54054133-54096493	1	+	54054332	54096473	789624	4	391,142,194,209,	0,14622,34463,42151,
#Deleted in new
chr1	54089855	54090093	chr1:54089855-54090093	7	+	54089855	54089855	16724991	1	238,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	54099967	54100224	chr1:54099967-54100224	7	-	54099967	54099967	16724991	2	156,99,	0,158,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	54104294	54106077	chr1:54104294-54106077	1	+	54104467	54104860	789624	1	1783,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	54132685	54196433	chr1:54132685-54196433	3	-	54153175	54195616	789624	10	609,179,354,336,348,163,86,105,297,65,	0,3944,7067,8412,11780,20158,20410,51475,62733,63683,
#Partially deleted in new
chr1	54132967	54152922	chr1:54132967-54152922	1	-	54132967	54152922	789624	6	327,179,354,336,348,79,	0,3662,6785,8130,11498,19876,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	54137745	54142980	chr1:54137745-54142980	3	+	54137745	54137745	8553170	2	248,4721,	0,514,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	54138994	54153770	chr1:54138994-54153770	3	-	54139519	54152922	789624	4	1112,336,348,927,	0,2103,5471,13849,
#Partially deleted in new
chr1	54141223	54172694	chr1:54141223-54172694	0	-	54141223	54141223	8553170	3	210,245,92,	0,3345,31379,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	54143391	54200073	chr1:54143391-54200073	0	-	54187724	54195616	789624	8	1422,163,86,105,88,297,123,98,	0,9452,9704,40769,44260,52027,52977,56584,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	54169650	54195681	chr1:54169650-54195681	1	-	54174618	54195616	789624	5	5172,105,88,149,263,	0,14510,18001,21097,25768,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	54172335	54195593	chr1:54172335-54195593	0	-	54187724	54195571	789624	7	2487,204,250,105,106,88,175,	0,6813,7648,11825,13845,15316,23083,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	54172335	54200010	chr1:54172335-54200010	0	-	54187724	54195616	789624	7	2487,204,105,88,297,123,35,	0,6813,11825,15316,23083,24033,27640,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	54172355	54200011	chr1:54172355-54200011	0	-	54172355	54172355	8553170	8	2467,204,2126,231,159,297,123,36,	0,6793,11805,15296,18382,23063,24013,27620,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	54173217	54200036	chr1:54173217-54200036	0	-	54187724	54195616	789624	8	1605,204,105,88,159,297,123,61,	0,5931,10943,14434,17520,22201,23151,26758,
#Partially deleted in new
chr1	54174418	54195616	chr1:54174418-54195616	3	-	54174618	54195616	789624	6	404,204,105,88,149,198,	0,4730,9742,13233,16329,21000,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	54175544	54195436	chr1:54175544-54195436	0	-	54175615	54195436	789624	5	116,204,105,159,18,	0,3604,8616,15193,19874,
#Partially deleted in new
chr1	54184040	54210132	chr1:54184040-54210132	0	+	54184040	54184040	8553170	4	260,184,116,187,	0,20977,21254,25905,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	54186152	54190837	chr1:54186152-54190837	0	-	54186152	54186152	8553170	3	134,231,90,	0,1499,4595,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	54190550	54196404	chr1:54190550-54196404	1	-	54190677	54195616	789624	3	346,297,36,	0,4868,5818,
#Partially deleted in new
chr1	54200166	54218381	chr1:54200166-54218381	1	+	54200334	54218249	789624	5	423,184,158,204,210,	0,9781,12334,15974,18005,
#Partially deleted in new
chr1	54200166	54218383	chr1:54200166-54218383	3	+	54200243	54218249	0	7	423,184,116,186,158,204,212,	0,4851,5128,9779,12334,15974,18005,
#Partially deleted in new
chr1	54200195	54225464	chr1:54200195-54225464	1	+	54200243	54225382	789624	7	394,184,116,186,158,204,340,	0,4822,5099,9750,12305,15945,24929,
#Partially deleted in new
chr1	54200203	54210131	chr1:54200203-54210131	0	+	54200203	54200203	8553170	5	38,184,116,145,186,	0,4814,5091,7156,9742,
#Partially deleted in new
chr1	54209945	54220930	chr1:54209945-54220930	0	+	54209945	54220856	789624	4	186,158,204,320,	0,2555,6195,10665,
#Partially deleted in new
chr1	54225431	54356818	chr1:54225431-54356818	0	-	54225431	54225431	8553170	14	1729,102,29,79,71,55,36,49,65,77,67,60,90,404,	0,2823,3017,3316,13697,15473,16042,16732,17803,26184,26362,31695,56006,130983,
#Partially deleted in new
chr1	54225432	54406395	chr1:54225432-54406395	1	-	54227106	54405984	789624	18	1698,27,102,29,79,71,55,36,49,65,77,67,60,90,85,62,73,443,	0,1701,2822,3016,3315,13696,15472,16041,16731,17802,26183,26361,31694,56005,176428,179143,179425,180520,
#Partially deleted in new
chr1	54226516	54228834	chr1:54226516-54228834	0	-	54226516	54226516	8553170	4	644,102,29,87,	0,1738,1932,2231,
#Partially deleted in new
chr1	54226631	54406419	chr1:54226631-54406419	3	-	54227130	54406008	789624	18	529,102,29,79,71,55,36,49,65,77,67,60,81,90,85,62,73,467,	0,1623,1817,2116,12497,14273,14842,15532,16603,24984,25162,30495,31437,54806,175229,177944,178226,179321,
#Partially deleted in new
chr1	54226631	54405504	chr1:54226631-54405504	1	-	54227130	54281473	789624	18	529,102,29,79,71,55,36,49,65,77,67,60,81,90,85,62,73,56,	0,1623,1817,2116,12497,14273,14842,15532,16603,24984,25162,30495,31437,54806,175229,177944,178226,178817,
#Partially deleted in new
chr1	54226638	54406008	chr1:54226638-54406008	1	-	54227130	54406008	789624	17	522,102,29,79,71,55,36,49,65,77,67,60,90,85,62,73,56,	0,1616,1810,2109,12490,14266,14835,15525,16596,24977,25155,30488,54799,175222,177937,178219,179314,
#Partially deleted in new
chr1	54226646	54404633	chr1:54226646-54404633	0	-	54226646	54226646	8553170	6	71,67,60,90,85,58,	0,25147,30480,54791,175214,177929,
#Partially deleted in new
chr1	54226919	54406223	chr1:54226919-54406223	1	-	54227130	54406008	789624	17	241,102,29,79,71,55,36,49,65,77,67,81,90,85,62,73,271,	0,1335,1529,1828,12209,13985,14554,15244,16315,24696,24874,31149,54518,174941,177656,177938,179033,
#Partially deleted in new
chr1	54228254	54325439	chr1:54228254-54325439	0	-	54228254	54228254	8553170	13	102,29,79,71,55,36,49,65,77,67,60,90,71,	0,194,493,10874,12650,13219,13909,14980,23361,23539,28872,53183,97114,
#Deleted in new
chr1	54236439	54239063	chr1:54236439-54239063	3	+	54236439	54236439	789624	1	2624,	0,
#Partially deleted in new
chr1	54238988	54251860	chr1:54238988-54251860	0	-	54239077	54251860	789624	7	211,55,36,49,65,77,67,	0,1916,2485,3175,4246,12627,12805,
#Partially deleted in new
chr1	54239095	54257266	chr1:54239095-54257266	0	-	54239095	54239095	8553170	8	104,55,36,49,65,77,67,140,	0,1809,2378,3068,4139,12520,12698,18031,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	54242855	54251671	chr1:54242855-54251671	0	-	54242855	54242855	8553170	2	468,56,	0,8760,
#Partially deleted in new
chr1	54243188	54326472	chr1:54243188-54326472	0	-	54243188	54243188	8553170	6	111,77,67,60,90,147,	0,8427,8605,13938,38249,83137,
#Partially deleted in new
chr1	54243236	54413479	chr1:54243236-54413479	0	-	54243236	54281473	789624	9	63,77,67,60,90,85,62,73,124,	0,8379,8557,13890,38201,158624,161339,161621,170119,
#Partially deleted in new
chr1	54243271	54335881	chr1:54243271-54335881	0	-	54243271	54243271	8553170	8	28,77,67,89,60,81,90,85,	0,8344,8522,12325,13855,14797,38166,92525,
#Deleted in new
chr1	54285404	54287371	chr1:54285404-54287371	3	+	54285404	54285404	8553170	2	78,1033,	0,934,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	54412707	54413466	chr1:54412707-54413466	0	-	54412707	54412707	8553170	3	170,173,111,	0,373,648,
#Partially deleted in new
chr1	54416255	54420860	chr1:54416255-54420860	3	+	54416255	54416255	8553170	2	27,262,	0,4343,
#Deleted in new
chr1	54516411	54517259	chr1:54516411-54517259	3	-	54516411	54516411	8553170	2	627,56,	0,792,
#Deleted in new
chr1	54524823	54524931	chr1:54524823-54524931	7	+	54524823	54524823	16724991	1	108,	0,
#Deleted in new
chr1	54536795	54537758	chr1:54536795-54537758	7	+	54536795	54536795	16724991	1	963,	0,
#Partially deleted in new
chr1	54542256	54610124	chr1:54542256-54610124	0	+	54542256	54542256	8553170	15	181,208,61,99,136,157,120,145,56,67,84,134,132,127,1168,	0,42398,50289,51684,52299,55002,57039,59012,60412,61614,62089,62819,64877,65685,66700,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	54548219	54598858	chr1:54548219-54598858	0	+	54548219	54548219	8553170	8	123,153,208,70,61,99,136,1600,	0,247,36435,37615,44326,45721,46336,49039,
#Partially deleted in new
chr1	54548227	54610327	chr1:54548227-54610327	1	+	54548309	54609112	0	16	115,208,70,61,99,136,157,120,145,56,67,84,134,132,127,1371,	0,36427,37607,44318,45713,46328,49031,51068,53041,54441,55643,56118,56848,58906,59714,60729,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	54548227	54639192	chr1:54548227-54639192	3	+	54548309	54634729	0	17	115,208,70,61,99,136,157,120,145,56,67,84,134,132,127,153,4505,	0,36427,37607,44318,45713,46328,49031,51068,53041,54441,55643,56118,56848,58906,59714,82506,86460,
#Partially deleted in new
chr1	54597263	54599658	chr1:54597263-54599658	0	+	54597263	54597263	8553170	2	152,363,	0,2032,
#Partially deleted in new
chr1	54609181	54623556	chr1:54609181-54623556	3	-	54609267	54623395	789624	8	760,144,140,225,160,153,144,279,	0,1230,2424,3304,5518,6838,10682,14096,
#Partially deleted in new
chr1	54609181	54623556	chr1:54609181-54623556	1	-	54609267	54623395	789624	7	366,117,225,160,153,144,279,	0,2447,3304,5518,6838,10682,14096,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	54621476	54628438	chr1:54621476-54628438	3	-	54621476	54621476	8553170	2	342,281,	0,6681,
#Partially deleted in new
chr1	54641753	54700208	chr1:54641753-54700208	1	+	54652926	54700208	789624	19	215,35,1305,74,84,80,130,96,105,136,113,177,155,139,191,138,115,38,133,	0,10195,11099,23413,27100,28743,29046,31337,31947,32262,36988,37509,38137,40902,44504,50670,53622,55899,58322,
#Partially deleted in new
chr1	54641785	54741733	chr1:54641785-54741733	0	+	54652926	54674083	789624	33	183,35,1305,74,84,80,130,96,105,152,113,177,155,139,191,138,115,141,180,147,103,63,88,118,162,78,125,87,64,46,82,83,323,	0,10163,11067,23381,27068,28711,29014,31305,31915,32214,36956,37477,38105,40870,44472,50638,53590,58535,59357,60304,64649,67228,73737,74814,75706,79377,80889,86560,89700,89869,91843,95796,99625,
#Partially deleted in new
chr1	54641789	54670828	chr1:54641789-54670828	0	+	54641789	54641789	8553170	6	179,74,194,84,80,29,	0,23377,23819,27064,28707,29010,
#Partially deleted in new
chr1	54641792	54710259	chr1:54641792-54710259	3	+	54652926	54710187	789624	24	176,35,1305,74,84,80,130,96,105,136,113,177,155,139,191,138,115,141,180,156,123,103,63,314,	0,10156,11060,23374,27061,28704,29007,31298,31908,32223,36949,37470,38098,40863,44465,50631,53583,58528,59350,60297,60830,64642,67221,68153,
#Partially deleted in new
chr1	54641799	54742231	chr1:54641799-54742231	3	+	54652926	54717560	789624	33	169,35,1305,74,84,80,130,96,105,136,113,177,155,139,191,138,115,141,180,156,123,103,63,88,118,162,78,125,87,215,82,83,821,	0,10149,11053,23367,27054,28697,29000,31291,31901,32216,36942,37463,38091,40856,44458,50624,53576,58521,59343,60290,60823,64635,67214,73723,74800,75692,79363,80875,86546,89686,91829,95782,99611,
#Partially deleted in new
chr1	54641800	54710241	chr1:54641800-54710241	0	+	54652926	54682694	789624	23	168,35,1305,74,84,80,130,96,105,136,113,177,139,191,138,115,141,180,156,123,103,63,296,	0,10148,11052,23366,27053,28696,28999,31290,31900,32215,36941,37462,40855,44457,50623,53575,58520,59342,60289,60822,64634,67213,68145,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	54641800	54664055	chr1:54641800-54664055	0	+	54641800	54641800	8553170	4	168,35,1305,297,	0,10148,11052,21958,
#Partially deleted in new
chr1	54641807	54710262	chr1:54641807-54710262	1	+	54665231	54710187	789624	22	161,74,84,80,130,96,105,136,113,177,155,139,191,138,115,141,180,156,123,103,63,317,	0,23359,27046,28689,28992,31283,31893,32208,36934,37455,38083,40848,44450,50616,53568,58513,59335,60282,60815,64627,67206,68138,
#Partially deleted in new
chr1	54641821	54700223	chr1:54641821-54700223	1	+	54652926	54700159	789624	19	147,35,1305,74,84,80,130,96,105,136,113,177,155,139,191,138,115,38,155,	0,10127,11031,23345,27032,28675,28978,31269,31879,32194,36920,37441,38069,40834,44436,50602,53554,55831,58247,
#Partially deleted in new
chr1	54651236	54710266	chr1:54651236-54710266	0	+	54652926	54674083	789624	21	747,1305,74,84,80,130,96,105,152,113,177,139,138,115,141,180,156,123,103,63,321,	0,1616,13930,17617,19260,19563,21854,22464,22763,27505,28026,31419,41187,44139,49084,49906,50853,51386,55198,57777,58709,
#Partially deleted in new
chr1	54651944	54710260	chr1:54651944-54710260	0	+	54652926	54674083	789624	23	39,1305,74,84,80,130,96,105,152,113,177,155,139,191,138,115,141,180,156,123,103,63,315,	0,908,13222,16909,18552,18855,21146,21756,22055,26797,27318,27946,30711,34313,40479,43431,48376,49198,50145,50678,54490,57069,58001,
#Partially deleted in new
chr1	54652890	54700223	chr1:54652890-54700223	0	+	54652926	54674083	789624	18	1267,74,84,80,130,96,105,152,113,177,155,139,191,138,115,160,38,148,	0,12276,15963,17606,17909,20200,20810,21109,25851,26372,27000,29765,33367,39533,42485,42805,44762,47185,
#Partially deleted in new
chr1	54654086	54710261	chr1:54654086-54710261	0	+	54665231	54670919	789624	20	71,74,84,130,96,105,136,113,177,155,191,138,115,132,180,156,123,103,63,316,	0,11080,14767,16713,19004,19614,19929,24655,25176,25804,32171,38337,41289,46243,47056,48003,48536,52348,54927,55859,
#Partially deleted in new
chr1	54686264	54695782	chr1:54686264-54695782	0	+	54686264	54686264	8553170	3	184,138,407,	0,6159,9111,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	54697191	54710266	chr1:54697191-54710266	0	+	54697191	54697191	8553170	7	3270,180,156,123,103,63,321,	0,3951,4898,5431,9243,11822,12754,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	54699295	54742231	chr1:54699295-54742231	0	+	54699295	54699295	8553170	17	936,141,180,156,123,103,63,88,118,162,78,125,87,215,82,83,821,	0,1025,1847,2794,3327,7139,9718,16227,17304,18196,21867,23379,29050,32190,34333,38286,42115,
#Partially deleted in new
chr1	54715821	54742657	chr1:54715821-54742657	3	+	54715908	54741513	789624	10	198,118,162,78,125,87,215,82,83,1247,	0,778,1670,5341,6853,12524,15664,17807,21760,25589,
#Partially deleted in new
chr1	54715864	54717767	chr1:54715864-54717767	0	+	54715864	54715864	8553170	3	155,118,276,	0,735,1627,
#Partially deleted in new
chr1	54715867	54742307	chr1:54715867-54742307	0	+	54715867	54715867	8553170	10	276,119,162,78,125,87,215,82,83,897,	0,731,1624,5295,6807,12478,15618,17761,21714,25543,
#Partially deleted in new
chr1	54736688	54742307	chr1:54736688-54742307	0	+	54736688	54736688	8553170	2	976,897,	0,4722,
#Partially deleted in new
chr1	54756897	54764514	chr1:54756897-54764514	3	-	54757733	54759161	789624	2	2293,54,	0,7563,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	54779711	54801267	chr1:54779711-54801267	1	-	54781242	54801163	789624	7	2068,153,162,119,116,56,671,	0,2613,6271,7245,7999,8330,20885,
#Partially deleted in new
chr1	54781595	54787995	chr1:54781595-54787995	0	-	54781595	54781595	8553170	3	184,153,2013,	0,729,4387,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	54784550	54801198	chr1:54784550-54801198	3	-	54785545	54801163	789624	6	1094,162,119,116,56,602,	0,1432,2406,3160,3491,16046,
#Partially deleted in new
chr1	54784553	54787792	chr1:54784553-54787792	0	-	54784726	54787792	789624	4	323,162,119,82,	0,1429,2403,3157,
#Deleted in new
chr1	54786642	54787905	chr1:54786642-54787905	0	-	54786642	54786642	8553170	2	433,195,	0,1068,
#Partially deleted in new
chr1	54792884	54794905	chr1:54792884-54794905	3	+	54792884	54792884	8553170	2	175,168,	0,1853,
#Partially deleted in new
chr1	54806062	54842252	chr1:54806062-54842252	3	+	54806116	54841676	789624	11	158,88,165,123,138,144,162,126,134,87,452,	0,933,1463,1826,5731,5983,7751,8851,10926,35553,35738,
#Partially deleted in new
chr1	54806101	54842252	chr1:54806101-54842252	1	+	54806116	54841873	789624	10	119,88,165,123,138,144,162,126,134,452,	0,894,1424,1787,5692,5944,7712,8812,10887,35699,
#Partially deleted in new
chr1	54849626	54887271	chr1:54849626-54887271	3	-	54852232	54887119	789624	9	2760,179,198,144,264,119,106,156,383,	0,3807,4410,15676,21723,25466,26315,33991,37262,
#Partially deleted in new
chr1	54849632	54887195	chr1:54849632-54887195	1	-	54852232	54887119	789624	9	2754,179,198,144,264,119,106,156,307,	0,3801,4404,15670,21717,25460,26309,33985,37256,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	54849632	54887185	chr1:54849632-54887185	0	-	54877923	54887119	8553170	10	2754,179,198,144,264,119,106,97,156,297,	0,3801,4404,15670,21717,25460,26309,28269,33985,37256,
#Partially deleted in new
chr1	54849642	54887167	chr1:54849642-54887167	1	-	54852232	54887119	789624	10	2744,179,198,36,144,264,119,106,156,279,	0,3791,4394,6346,15660,21707,25450,26299,33975,37246,
#Partially deleted in new
chr1	54849652	54887195	chr1:54849652-54887195	0	-	54879790	54887119	8553170	9	3960,198,144,264,119,106,57,156,307,	0,4384,15650,21697,25440,26289,30096,33965,37236,
#Partially deleted in new
chr1	54850341	54887195	chr1:54850341-54887195	0	-	54879790	54887119	8553170	10	2045,179,198,144,264,119,106,57,156,307,	0,3092,3695,14961,21008,24751,25600,29407,33276,36547,
#Partially deleted in new
chr1	54850875	54887195	chr1:54850875-54887195	1	-	54852232	54887119	789624	10	370,184,179,198,144,264,119,106,156,307,	0,1327,2558,3161,14427,20474,24217,25066,32742,36013,
#Partially deleted in new
chr1	54852366	54886836	chr1:54852366-54886836	0	-	54852366	54852366	8553170	9	20,179,198,144,264,119,106,156,35,	0,1067,1670,12936,18983,22726,23575,31251,34435,
#Partially deleted in new
chr1	54871494	54886896	chr1:54871494-54886896	0	-	54871494	54871494	8553170	5	119,119,106,156,77,	0,3598,4447,12123,15325,
#Partially deleted in new
chr1	54871591	54886490	chr1:54871591-54886490	0	-	54871591	54883737	8553170	5	22,119,106,156,166,	0,3501,4350,12026,14733,
#Partially deleted in new
chr1	54871601	54886808	chr1:54871601-54886808	0	-	54871601	54886725	8553170	5	12,119,106,156,191,	0,3491,4340,12016,15016,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	54875975	54887195	chr1:54875975-54887195	0	-	54875975	54875975	8553170	4	72,47,156,307,	0,6713,7642,10913,
#Deleted in new
chr1	54886874	54888001	chr1:54886874-54888001	3	+	54886874	54886874	8553170	2	261,314,	0,813,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	54887562	54888718	chr1:54887562-54888718	3	+	54887562	54887562	8553170	2	221,219,	0,937,
#Deleted in new
chr1	54887726	54888663	chr1:54887726-54888663	0	+	54887726	54887726	8553170	2	250,164,	0,773,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	54887727	54888850	chr1:54887727-54888850	1	+	54887727	54887727	8553170	3	56,108,351,	0,133,772,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	54887731	54888850	chr1:54887731-54888850	0	+	54887731	54887731	8553170	2	52,351,	0,768,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	54974899	54980464	chr1:54974899-54980464	3	-	54974899	54974899	8553170	4	749,136,85,625,	0,3712,4659,4940,
#Partially deleted in new
chr1	54975194	54980458	chr1:54975194-54980458	0	-	54975194	54975194	8553170	3	454,136,470,	0,3417,4794,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	54975194	54980452	chr1:54975194-54980452	0	-	54975194	54975194	8553170	4	454,138,136,464,	0,2530,3417,4794,
#Partially deleted in new
chr1	54975231	54980464	chr1:54975231-54980464	0	-	54975231	54975231	8553170	4	417,136,85,476,	0,3380,4327,4757,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	54980791	54992293	chr1:54980791-54992293	3	+	54981065	54992103	789624	3	289,350,458,	0,5305,11044,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	54980949	54992274	chr1:54980949-54992274	3	-	54980949	54980949	8553170	2	66,362,	0,10963,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	54998192	55011784	chr1:54998192-55011784	3	+	54999186	55008628	789624	4	1171,95,276,3571,	0,6829,8804,10021,
#Partially deleted in new
chr1	55039547	55064852	chr1:55039547-55064852	3	+	55039837	55063584	0	12	497,192,124,134,142,197,184,174,149,178,182,1484,	0,4295,6975,12730,13102,16445,17783,18488,18951,19938,21827,23821,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	55050933	55064850	chr1:55050933-55064850	0	+	55050933	55050933	8553170	8	1478,142,197,87,174,149,182,1482,	0,1716,5059,6494,7102,7565,10441,12435,
#Partially deleted in new
chr1	55066358	55215113	chr1:55066358-55215113	3	-	55069044	55215113	789624	68	2749,111,87,76,79,67,66,114,122,103,93,117,97,114,104,96,151,142,125,221,120,142,83,99,126,120,145,118,192,62,161,71,156,160,229,96,98,156,94,86,174,99,111,67,116,54,141,77,112,132,150,108,48,162,96,108,104,115,159,75,66,66,36,123,144,68,166,324,	0,5455,5958,6427,7469,9098,10876,12179,13179,14963,16913,17413,19583,23268,25664,26462,27578,28896,30139,30593,31239,31584,32117,33412,34480,35225,37517,39787,40880,43826,54237,55077,57088,58110,58961,59304,63118,66186,67711,67969,71156,71447,72249,72585,75257,76383,76620,77768,79639,80570,81290,82104,87511,87760,88012,88312,90589,90897,92519,93252,95840,99526,100209,105197,106018,110017,111608,148431,
#Partially deleted in new
chr1	55071272	55075499	chr1:55071272-55075499	0	-	55071433	55075499	789624	6	218,111,87,76,79,43,	0,541,1044,1513,2555,4184,
#Deleted in new
chr1	55071812	55072992	chr1:55071812-55072992	0	-	55071812	55071812	8553170	3	112,87,207,	0,504,973,
#Partially deleted in new
chr1	55081386	55086424	chr1:55081386-55086424	0	-	55081386	55081386	8553170	4	38,93,117,483,	0,1885,2385,4555,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	55083842	55086434	chr1:55083842-55086434	0	-	55083842	55083842	8553170	3	46,29,493,	0,550,2099,
#Partially deleted in new
chr1	55093552	55095319	chr1:55093552-55095319	0	-	55093552	55093552	8553170	2	535,65,	0,1702,
#Partially deleted in new
chr1	55147648	55153917	chr1:55147648-55153917	0	-	55151918	55153917	789624	4	150,108,64,48,	0,814,4263,6221,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	55217644	55324691	chr1:55217644-55324691	3	+	55217644	55217644	8553170	2	288,1714,	0,105333,
#Partially deleted in new
chr1	55217860	55234177	chr1:55217860-55234177	1	+	55217860	55217860	789624	2	72,566,	0,15751,
#Deleted in new
chr1	55222378	55223372	chr1:55222378-55223372	7	+	55222378	55222378	16724991	1	994,	0,
#Deleted in new
chr1	55225640	55225723	chr1:55225640-55225723	3	+	55225640	55225640	5263520	1	83,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	55329287	55832568	chr1:55329287-55832568	0	+	55329287	55329287	8553170	4	138,82,58,305,	0,285633,343972,502976,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	55361407	55832568	chr1:55361407-55832568	3	+	55361407	55361407	8553170	4	158,82,58,305,	0,253513,311852,470856,
#Deleted in new
chr1	55367465	55368774	chr1:55367465-55368774	7	+	55367465	55367465	16724991	1	1309,	0,
#Deleted in new
chr1	55372709	55373316	chr1:55372709-55373316	7	-	55372709	55372709	16724991	1	607,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	55376525	55376852	chr1:55376525-55376852	3	-	55376525	55376525	8553170	1	327,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	55398513	55398620	chr1:55398513-55398620	3	+	55398513	55398513	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	55484870	55484972	chr1:55484870-55484972	3	-	55484870	55484870	8553170	1	102,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	55581036	55735002	chr1:55581036-55735002	1	+	55581036	55581036	8553170	3	158,82,3823,	0,33884,150143,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	55581060	55832572	chr1:55581060-55832572	0	+	55581060	55581060	8553170	4	134,82,58,309,	0,33860,92199,251203,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	55823806	55868248	chr1:55823806-55868248	1	+	55823806	55823806	8553170	5	95,162,109,128,151,	0,8457,23622,39125,44291,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	55823815	56070513	chr1:55823815-56070513	0	+	55823815	55823815	8553170	12	86,162,109,107,144,85,132,82,87,43,154,214,	0,8448,23613,138067,151512,154678,193908,234202,235062,235231,235656,246484,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	55868253	55950118	chr1:55868253-55950118	3	+	55868253	55868253	8553170	5	2323,280,100,157,286,	0,2925,60654,71712,81579,
#Partially deleted in new
chr1	55915606	55944974	chr1:55915606-55944974	0	-	55915606	55915606	8553170	2	538,59,	0,29309,
#Partially deleted in new
chr1	55915608	55944963	chr1:55915608-55944963	3	-	55915608	55915608	789624	3	536,47,48,	0,5756,29307,
#Deleted in new
chr1	55938713	55939280	chr1:55938713-55939280	7	-	55938713	55938713	16724991	2	264,166,	0,401,
#Deleted in new
chr1	55945086	55950119	chr1:55945086-55950119	0	+	55945086	55945086	789624	2	166,287,	0,4746,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	56145720	56155224	chr1:56145720-56155224	3	+	56145720	56145720	8553170	3	161,271,299,	0,5280,9205,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	56154544	56375299	chr1:56154544-56375299	3	-	56154544	56154544	8553170	8	511,84,50,111,126,60,171,97,	0,1174,6573,18011,28950,81830,94485,220658,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	56154656	56173802	chr1:56154656-56173802	1	-	56154656	56154656	8553170	5	399,84,50,80,1247,	0,1062,6461,11423,17899,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	56154656	56225153	chr1:56154656-56225153	1	-	56154656	56154656	8553170	8	449,84,50,80,252,126,118,184,	0,1062,6461,11423,13582,28838,69751,70313,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	56154656	56194113	chr1:56154656-56194113	0	-	56154656	56154656	8553170	4	423,50,126,293,	0,6461,28838,39164,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	56165782	56172589	chr1:56165782-56172589	0	-	56165782	56165782	8553170	2	377,34,	0,6773,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	56165786	56375353	chr1:56165786-56375353	0	-	56165786	56165786	8553170	5	373,111,126,171,151,	0,6769,17708,83243,209416,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	56165805	56172730	chr1:56165805-56172730	1	-	56165805	56165805	8553170	3	354,104,175,	0,2433,6750,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	56172203	56172715	chr1:56172203-56172715	0	-	56172203	56172203	8553170	1	512,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	56173420	56285570	chr1:56173420-56285570	1	-	56173420	56173420	8553170	6	216,126,60,171,241,183,	0,10074,62954,75609,80232,111967,
#Partially deleted in new
chr1	56173421	56214865	chr1:56173421-56214865	0	-	56173421	56173421	8553170	2	215,75,	0,41369,
#Partially deleted in new
chr1	56173432	56512039	chr1:56173432-56512039	0	-	56483357	56512039	789624	6	204,126,171,192,122,64,	0,10062,75597,309830,323122,338543,
#Deleted in new
chr1	56207566	56208456	chr1:56207566-56208456	7	-	56207566	56207566	16724991	1	890,	0,
#Partially deleted in new
chr1	56235990	56375371	chr1:56235990-56375371	0	-	56235990	56235990	8553170	3	444,171,169,	0,13039,139212,
#Partially deleted in new
chr1	56236087	56383219	chr1:56236087-56383219	1	-	56236087	56236087	8553170	3	347,171,475,	0,12942,146657,
#Partially deleted in new
chr1	56248284	56523864	chr1:56248284-56523864	0	-	56483357	56523864	789624	6	916,226,192,122,177,42,	0,230601,234978,248270,263691,275538,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	56248284	56375299	chr1:56248284-56375299	1	-	56248284	56248284	8553170	4	916,241,132,97,	0,5368,10084,126918,
#Partially deleted in new
chr1	56248284	56375313	chr1:56248284-56375313	0	-	56248284	56248284	8553170	3	916,114,111,	0,84008,126918,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	56248293	56258571	chr1:56248293-56258571	0	-	56248293	56248293	8553170	3	907,241,203,	0,5359,10075,
#Partially deleted in new
chr1	56248293	56376202	chr1:56248293-56376202	0	-	56248293	56248293	8553170	2	907,365,	0,127544,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	56248293	56375308	chr1:56248293-56375308	0	-	56248293	56248293	8553170	3	907,241,106,	0,5359,126909,
#Partially deleted in new
chr1	56248293	56375314	chr1:56248293-56375314	0	-	56248293	56248293	8553170	3	907,132,112,	0,10075,126909,
#Partially deleted in new
chr1	56248293	56524495	chr1:56248293-56524495	3	-	56483357	56524495	789624	6	907,192,122,177,58,219,	0,234969,248261,263682,275529,275983,
#Partially deleted in new
chr1	56248311	56375265	chr1:56248311-56375265	1	-	56248311	56248311	8553170	3	889,96,63,	0,56153,126891,
#Partially deleted in new
chr1	56248323	56375347	chr1:56248323-56375347	1	-	56248323	56248323	8553170	3	877,191,145,	0,70062,126879,
#Partially deleted in new
chr1	56248360	56483454	chr1:56248360-56483454	0	-	56483357	56483454	789624	3	840,174,192,	0,151733,234902,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	56248366	56483454	chr1:56248366-56483454	0	-	56483357	56483454	789624	3	834,241,192,	0,5286,234896,
#Partially deleted in new
chr1	56248773	56477687	chr1:56248773-56477687	0	-	56248773	56248773	8553170	2	427,555,	0,228359,
#Partially deleted in new
chr1	56248885	56332262	chr1:56248885-56332262	0	-	56248885	56248885	8553170	2	315,139,	0,83238,
#Partially deleted in new
chr1	56258404	56375318	chr1:56258404-56375318	0	-	56258404	56258404	8553170	2	163,116,	0,116798,
#Deleted in new
chr1	56414962	56415966	chr1:56414962-56415966	3	+	56414962	56414962	789624	4	188,95,77,185,	0,285,570,819,
#Deleted in new
chr1	56415063	56415962	chr1:56415063-56415962	0	+	56415063	56415063	8553170	2	87,181,	0,718,
#Partially deleted in new
chr1	56494746	56579568	chr1:56494746-56579568	3	-	56496550	56579016	789624	6	1930,177,58,278,158,691,	0,17229,29076,29530,42208,84131,
#Partially deleted in new
chr1	56496275	56517006	chr1:56496275-56517006	0	-	56496275	56496275	8553170	3	401,177,118,	0,15700,20613,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	56496433	56513771	chr1:56496433-56513771	0	-	56496433	56496433	8553170	2	243,1796,	0,15542,
#Partially deleted in new
chr1	56524307	56645301	chr1:56524307-56645301	0	-	56524307	56524307	8553170	4	247,158,157,84,	0,12647,119160,120910,
#Deleted in new
chr1	56538451	56538911	chr1:56538451-56538911	7	+	56538451	56538451	16724991	1	460,	0,
#Partially deleted in new
chr1	56579167	56645272	chr1:56579167-56645272	0	-	56579167	56579167	8553170	3	417,125,55,	0,64332,66050,
#Deleted in new
chr1	56585611	56586242	chr1:56585611-56586242	7	-	56585611	56585611	16724991	2	190,243,	0,388,
#Deleted in new
chr1	56619408	56619549	chr1:56619408-56619549	7	-	56619408	56619408	16724991	1	141,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	56645321	56715335	chr1:56645321-56715335	3	+	56645387	56707713	0	9	160,142,94,145,88,225,505,127,7861,	0,29059,46072,47036,48443,50613,58649,60770,62153,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	56645387	56715334	chr1:56645387-56715334	1	+	56645387	56707713	789624	10	87,7,142,94,145,88,225,505,127,7860,	0,26053,28993,46006,46970,48377,50547,58583,60704,62087,
#Partially deleted in new
chr1	56718803	56819371	chr1:56718803-56819371	3	-	56719670	56819290	789624	20	889,34,157,94,87,61,29,99,61,41,115,160,97,32,35,110,34,162,748,90,	0,1218,1369,4784,7693,18283,19821,21893,23357,25222,25348,32240,35035,37092,39912,49025,68371,70169,73252,100478,
#Partially deleted in new
chr1	56718870	56762013	chr1:56718870-56762013	0	-	56718870	56718870	8553170	14	822,34,157,94,87,61,99,41,115,160,97,32,35,70,	0,1151,1302,4717,7626,18216,21826,25155,25281,32173,34968,37025,39845,43073,
#Deleted in new
chr1	56719649	56720856	chr1:56719649-56720856	0	-	56719649	56719649	8553170	3	43,34,684,	0,372,523,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	56726543	56819696	chr1:56726543-56819696	0	-	56726543	56726543	8553170	14	40,76,61,29,99,61,41,115,160,110,34,162,748,415,	0,5348,10543,12081,14153,15617,17482,17608,24500,41285,60631,62429,65512,92738,
#Partially deleted in new
chr1	56726547	56737647	chr1:56726547-56737647	0	-	56726547	56726547	8553170	2	36,561,	0,10539,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	56823678	56826920	chr1:56823678-56826920	3	-	56823678	56823678	8553170	2	1468,356,	0,2886,
#Partially deleted in new
chr1	56854805	56918221	chr1:56854805-56918221	3	+	56854901	56917716	0	11	173,94,145,148,190,201,241,126,158,223,657,	0,12803,20143,21256,26639,28675,31121,51861,53150,57597,62759,
#Partially deleted in new
chr1	56929209	56966015	chr1:56929209-56966015	3	-	56929403	56965948	789624	12	349,69,154,164,129,241,198,133,142,142,157,159,	0,2600,4125,11639,14486,16611,20345,22838,25476,27559,30810,36647,
#Partially deleted in new
chr1	56929211	56966140	chr1:56929211-56966140	1	-	56929403	56959591	789624	13	347,69,154,164,129,241,198,133,142,142,129,157,284,	0,2598,4123,11637,14484,16609,20343,22836,25474,27557,30317,30808,36645,
#Partially deleted in new
chr1	56929211	56966140	chr1:56929211-56966140	1	-	56929403	56960112	789624	13	347,69,154,164,129,241,198,133,142,142,157,222,284,	0,2598,4123,11637,14484,16609,20343,22836,25474,27557,30808,34560,36645,
#Deleted in new
chr1	56931593	56933381	chr1:56931593-56933381	0	-	56931593	56931593	8553170	2	285,47,	0,1741,
#Partially deleted in new
chr1	56956854	56966057	chr1:56956854-56966057	0	-	56956854	56956854	8553170	4	56,129,157,201,	0,2674,3165,9002,
#Partially deleted in new
chr1	56960062	56966140	chr1:56960062-56966140	0	-	56960062	56960062	8553170	3	114,222,284,	0,3709,5794,
#Partially deleted in new
chr1	56994777	57424057	chr1:56994777-57424057	3	-	57010694	57291030	789624	15	3351,111,128,549,109,63,60,66,39,120,132,99,140,203,128,	0,15902,16367,20105,28753,31203,68106,74582,76245,76744,77505,141765,150512,296186,429152,
#Partially deleted in new
chr1	56994781	57291168	chr1:56994781-57291168	1	-	57010694	57291030	789624	14	3347,111,128,549,109,63,60,66,39,120,132,99,140,205,	0,15898,16363,20101,28749,31199,68102,74578,76241,76740,77501,141761,150508,296182,
#Partially deleted in new
chr1	56997898	58546734	chr1:56997898-58546734	0	-	56997898	56997898	8553170	21	230,111,128,549,109,63,54,66,39,120,132,99,140,203,74,164,78,52,150,75,32,	0,12781,13246,16984,25632,28082,64991,71461,73124,73623,74384,138644,147391,293065,651693,886100,1152612,1345453,1508161,1529362,1548804,
#Partially deleted in new
chr1	56998024	57291066	chr1:56998024-57291066	1	-	57010694	57291030	789624	14	104,111,128,549,109,63,48,51,60,120,132,99,140,103,	0,12655,13120,16858,25506,27956,35361,35498,64859,73497,74258,138518,147265,292939,
#Partially deleted in new
chr1	57010694	57291065	chr1:57010694-57291065	1	-	57010694	57291030	789624	15	96,128,549,109,63,48,51,60,66,39,120,132,99,140,102,	0,450,4188,12836,15286,22691,22828,52189,58665,60328,60827,61588,125848,134595,280269,
#Partially deleted in new
chr1	57015351	57291065	chr1:57015351-57291065	0	-	57015351	57291030	789624	9	80,109,63,48,51,60,99,140,102,	0,8179,10629,18034,18171,47532,121191,129938,275612,
#Partially deleted in new
chr1	57062889	57291065	chr1:57062889-57291065	0	-	57062889	57291030	789624	6	54,120,132,99,140,102,	0,8632,9393,73653,82400,228074,
#Partially deleted in new
chr1	57070733	57424057	chr1:57070733-57424057	1	-	57070977	57291030	789624	7	328,120,132,99,140,203,128,	0,788,1549,65809,74556,220230,353196,
#Partially deleted in new
chr1	57071177	57136583	chr1:57071177-57136583	0	-	57071177	57071177	8553170	3	464,132,41,	0,1105,65365,
#Partially deleted in new
chr1	57145416	57307364	chr1:57145416-57307364	0	-	57145416	57145416	8553170	3	13,203,506,	0,145547,161442,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	57386575	57387450	chr1:57386575-57387450	3	+	57386575	57386575	8553170	2	147,561,	0,314,
#Deleted in new
chr1	57605846	57606206	chr1:57605846-57606206	7	-	57605846	57605846	16724991	1	360,	0,
#Partially deleted in new
chr1	57826070	57884085	chr1:57826070-57884085	0	-	57826070	57826070	8553170	2	385,87,	0,57928,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	57860531	57863215	chr1:57860531-57863215	1	+	57860531	57860531	789624	2	502,760,	0,1924,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	57860531	57862803	chr1:57860531-57862803	0	+	57860531	57860531	8553170	2	395,348,	0,1924,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	57860556	57862803	chr1:57860556-57862803	0	+	57860556	57860556	8553170	2	363,348,	0,1899,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	57860561	57862803	chr1:57860561-57862803	0	+	57860561	57860561	8553170	2	348,348,	0,1894,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	57860566	57862778	chr1:57860566-57862778	0	+	57860566	57860566	8553170	2	353,345,	0,1867,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	57860580	57862803	chr1:57860580-57862803	0	+	57860580	57860580	8553170	2	355,348,	0,1875,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	57860580	57867463	chr1:57860580-57867463	1	+	57860580	57860580	8553170	4	339,64,173,80,	0,1875,3841,6803,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	57860580	57862800	chr1:57860580-57862800	0	+	57860580	57860580	8553170	2	292,367,	0,1853,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	57860587	57863063	chr1:57860587-57863063	0	+	57860587	57860587	789624	2	285,608,	0,1868,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	57860608	57862670	chr1:57860608-57862670	0	+	57860608	57860608	8553170	2	425,237,	0,1825,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	57860638	57862803	chr1:57860638-57862803	0	+	57860638	57860638	8553170	2	288,370,	0,1795,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	57860663	57874341	chr1:57860663-57874341	0	+	57860663	57860663	8553170	3	370,64,375,	0,1792,13303,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	57862454	57880905	chr1:57862454-57880905	0	+	57862454	57862454	8553170	4	65,112,147,420,	0,14276,15842,18031,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	57862454	57864932	chr1:57862454-57864932	0	+	57862454	57862454	8553170	2	586,226,	0,2252,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	57862454	57878465	chr1:57862454-57878465	0	+	57862454	57862454	8553170	2	586,169,	0,15842,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	57862454	57865041	chr1:57862454-57865041	0	+	57862454	57862454	8553170	3	586,173,335,	0,1967,2252,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	57862454	57878344	chr1:57862454-57878344	0	+	57862454	57862454	8553170	3	473,112,48,	0,14276,15842,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	57862454	57880784	chr1:57862454-57880784	0	+	57862454	57862454	8553170	5	65,112,147,151,299,	0,14276,15842,17664,18031,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	57862454	57880740	chr1:57862454-57880740	0	+	57862454	57862454	8553170	4	586,112,147,255,	0,14276,15842,18031,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	57862454	57878467	chr1:57862454-57878467	0	+	57862454	57862454	8553170	6	65,173,118,99,112,171,	0,1967,2252,3847,14276,15842,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	57862454	57874201	chr1:57862454-57874201	0	+	57862454	57862454	8553170	2	586,235,	0,11512,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	57862776	57865041	chr1:57862776-57865041	0	+	57862776	57862776	8553170	3	151,173,335,	0,1645,1930,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	57862776	57867170	chr1:57862776-57867170	0	+	57862776	57862776	8553170	3	264,99,163,	0,3525,4231,
#Partially deleted in new
chr1	57862834	57867195	chr1:57862834-57867195	0	+	57862834	57862834	8553170	4	206,173,99,188,	0,1587,3467,4173,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	57863014	57880731	chr1:57863014-57880731	3	+	57863014	57863014	8553170	6	26,118,99,112,147,246,	0,1692,3287,13716,15282,17471,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	57875018	57878773	chr1:57875018-57878773	0	+	57875018	57875018	8553170	3	170,112,477,	0,1712,3278,
#Partially deleted in new
chr1	57876171	57878372	chr1:57876171-57878372	0	+	57876171	57876171	8553170	3	472,112,76,	0,559,2125,
#Deleted in new
chr1	58047888	58049335	chr1:58047888-58049335	7	-	58047888	58047888	16724991	1	1447,	0,
#Deleted in new
chr1	58048174	58049291	chr1:58048174-58049291	5	-	58048174	58048174	16724991	1	1117,	0,
#Deleted in new
chr1	58056132	58056480	chr1:58056132-58056480	7	-	58056132	58056132	16724991	1	348,	0,
#Partially deleted in new
chr1	58060138	58080274	chr1:58060138-58080274	3	+	58060138	58060138	8553170	5	169,85,27,75,264,	0,11411,14260,17850,19872,
#Deleted in new
chr1	58084418	58084559	chr1:58084418-58084559	7	+	58084418	58084418	16724991	1	141,	0,
#Deleted in new
chr1	58228681	58229003	chr1:58228681-58229003	7	-	58228681	58228681	16724991	1	322,	0,
#Partially deleted in new
chr1	58415383	58530662	chr1:58415383-58530662	0	-	58415383	58415383	8553170	4	102,150,75,62,	0,90676,111877,115217,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	58462551	58506199	chr1:58462551-58506199	0	-	58462551	58462551	8553170	2	243,140,	0,43508,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	58467926	58538818	chr1:58467926-58538818	0	-	58473872	58538818	789624	9	1073,143,150,75,129,108,174,229,24,	0,5899,38133,59334,62674,66026,66231,68586,70868,
#Partially deleted in new
chr1	58480718	58546800	chr1:58480718-58546800	3	-	58480964	58539294	789624	9	456,150,75,129,108,174,229,516,98,	0,25341,46542,49882,53234,53439,55794,58076,65984,
#Partially deleted in new
chr1	58480877	58530637	chr1:58480877-58530637	0	-	58480877	58480877	8553170	3	297,75,37,	0,46383,49723,
#Partially deleted in new
chr1	58533986	58546706	chr1:58533986-58546706	0	-	58533986	58539294	789624	5	74,174,229,516,43,	0,171,2526,4808,12677,
#Partially deleted in new
chr1	58534046	58546730	chr1:58534046-58546730	0	-	58534046	58534046	8553170	4	14,174,229,41,	0,111,2466,12643,
#Partially deleted in new
chr1	58534293	58546758	chr1:58534293-58546758	0	-	58534293	58539294	789624	4	38,229,516,69,	0,2219,4501,12396,
#Partially deleted in new
chr1	58534302	58546802	chr1:58534302-58546802	0	-	58534302	58539294	789624	4	29,229,516,62,	0,2210,4492,12438,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	58536690	58546714	chr1:58536690-58546714	0	-	58536690	58539294	789624	5	51,516,119,33,25,	0,2104,4800,5792,9999,
#Partially deleted in new
chr1	58539032	58546708	chr1:58539032-58546708	0	-	58539032	58539294	789624	2	278,74,	0,7602,
#Deleted in new
chr1	58552912	58553333	chr1:58552912-58553333	7	-	58552912	58552912	16724991	1	421,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	58565630	58565932	chr1:58565630-58565932	3	-	58565630	58565630	8553170	1	302,	0,
#Deleted in new
chr1	58575422	58577773	chr1:58575422-58577773	3	-	58576184	58577156	0	1	2351,	0,
#Partially deleted in new
chr1	58630840	58631530	chr1:58630840-58631530	7	-	58630840	58630840	16724991	1	690,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	58654738	58700092	chr1:58654738-58700092	3	-	58659996	58700052	0	20	5417,58,106,133,189,75,51,55,89,78,104,131,761,99,79,24,78,71,79,108,	0,6431,6667,10760,12299,13108,13893,14245,17131,18834,20738,22187,27046,30414,34299,35487,35601,38122,40390,45246,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	58654739	58689662	chr1:58654739-58689662	0	-	58654739	58654739	8553170	16	5416,58,106,133,189,75,51,55,89,78,104,131,761,99,79,369,	0,6430,6666,10759,12298,13107,13892,14244,17130,18833,20737,22186,27045,30413,34298,34554,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	58654750	58668483	chr1:58654750-58668483	1	-	58659996	58667906	0	7	5405,58,106,133,189,75,54,	0,6419,6655,10748,12287,13096,13679,
#Partially deleted in new
chr1	58659152	58690394	chr1:58659152-58690394	0	-	58659152	58659152	8553170	17	1003,58,106,133,189,75,137,55,89,78,104,131,761,99,79,24,55,	0,2017,2253,6346,7885,8694,9277,9831,12717,14420,16324,17773,22632,26000,29885,31073,31187,
#Partially deleted in new
chr1	58676771	58681896	chr1:58676771-58681896	0	-	58676771	58676771	8553170	2	285,112,	0,5013,
#Partially deleted in new
chr1	58682408	58700080	chr1:58682408-58700080	0	-	58682408	58682408	8553170	6	137,99,78,71,79,96,	0,2744,7931,10452,12720,17576,
#Partially deleted in new
chr1	58690187	58700072	chr1:58690187-58700072	0	-	58690187	58690187	8553170	5	62,78,71,79,88,	0,152,2673,4941,9797,
#Partially deleted in new
chr1	58692405	58700077	chr1:58692405-58700077	0	-	58692405	58692405	8553170	3	526,79,93,	0,2723,7579,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	58715608	58759623	chr1:58715608-58759623	1	+	58715608	58715608	8553170	7	33,164,188,512,158,27,1137,	0,2148,2952,35222,42034,42670,42878,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	58718419	58771295	chr1:58718419-58771295	3	+	58718419	58718419	8553170	4	329,78,103,2198,	0,47690,49413,50678,
#Deleted in new
chr1	58780787	58784327	chr1:58780787-58784327	3	-	58782074	58783070	0	1	3540,	0,
#Duplicated in new
chr1	58785127	58901105	chr1:58785127-58901105	3	+	58785127	58785127	8553170	3	178,129,2059,	0,111129,113919,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	58785159	58899594	chr1:58785159-58899594	1	+	58785159	58785159	789624	4	146,173,129,548,	0,108385,111097,113887,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	58812807	58813342	chr1:58812807-58813342	3	-	58812807	58812807	8553170	1	535,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	58838447	58851254	chr1:58838447-58851254	3	-	58838447	58838447	8553170	3	241,123,31,	0,2649,12776,
#Partially deleted in new
chr1	58882867	58896665	chr1:58882867-58896665	0	-	58882867	58882867	8553170	4	867,60,165,119,	0,6281,12977,13679,
#Partially deleted in new
chr1	58882871	58885662	chr1:58882871-58885662	0	-	58882871	58882871	8553170	3	863,134,90,	0,2000,2701,
#Partially deleted in new
chr1	58882871	58903679	chr1:58882871-58903679	3	-	58882871	58882871	8553170	5	863,60,165,93,112,	0,6277,12973,14126,20696,
#Partially deleted in new
chr1	58882873	58903747	chr1:58882873-58903747	0	-	58882873	58882873	8553170	4	861,60,165,180,	0,6275,12971,20694,
#Deleted in new
chr1	58895844	58896703	chr1:58895844-58896703	0	-	58895844	58895844	8553170	2	165,54,	0,805,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	58933642	59103820	chr1:58933642-59103820	3	+	58933642	58933642	8553170	14	153,182,61,129,160,90,59,1048,59,22,95,70,138,309,	0,5971,20216,86852,87484,87845,108529,114541,123048,123197,123295,128472,154372,169869,
#Deleted in new
chr1	58999675	59000494	chr1:58999675-59000494	7	+	58999675	58999675	16724991	1	819,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	59020365	59132795	chr1:59020365-59132795	1	+	59020365	59020365	8553170	6	258,90,59,95,79,449,	0,1122,21806,36572,106618,111981,
#Partially deleted in new
chr1	59020386	59033063	chr1:59020386-59033063	0	+	59020386	59020386	8553170	3	237,90,203,	0,1101,12474,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	59020587	59044614	chr1:59020587-59044614	0	+	59020587	59020587	8553170	4	36,90,59,121,	0,900,21584,23906,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	59020598	59023020	chr1:59020598-59023020	0	+	59020598	59020598	8553170	3	25,90,37,	0,889,2385,
#Deleted in new
chr1	59054396	59056049	chr1:59054396-59056049	3	-	59054396	59054396	8553170	2	134,37,	0,1616,
#Partially deleted in new
chr1	59055998	59078116	chr1:59055998-59078116	3	-	59055998	59055998	8553170	3	187,45,85,	0,3639,22033,
#Partially deleted in new
chr1	59056619	59088973	chr1:59056619-59088973	0	+	59056619	59056619	8553170	5	130,95,141,194,959,	0,318,25948,29783,31395,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	59056626	59104098	chr1:59056626-59104098	1	+	59056626	59056626	8553170	5	123,72,194,138,587,	0,26010,29776,31388,46885,
#Partially deleted in new
chr1	59056642	59088195	chr1:59056642-59088195	0	+	59056642	59056642	8553170	4	107,141,194,181,	0,25925,29760,31372,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	59056642	59088972	chr1:59056642-59088972	1	+	59056642	59056642	8553170	6	107,70,217,141,194,958,	0,5472,25578,25925,29760,31372,
#Partially deleted in new
chr1	59131935	59146875	chr1:59131935-59146875	1	-	59131935	59131935	5263520	3	811,100,200,	0,1295,14740,
#Partially deleted in new
chr1	59131959	59296491	chr1:59131959-59296491	3	-	59131959	59131959	8553170	5	787,100,1175,656,123,	0,1271,158234,163149,164409,
#Partially deleted in new
chr1	59132375	59146834	chr1:59132375-59146834	0	-	59132375	59132375	8553170	3	142,100,159,	0,855,14300,
#Partially deleted in new
chr1	59132375	59146834	chr1:59132375-59146834	0	-	59132375	59132375	8553170	3	371,75,159,	0,880,14300,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	59132375	59208105	chr1:59132375-59208105	0	-	59132375	59132375	8553170	4	371,100,212,95,	0,855,70719,75635,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	59132375	59208121	chr1:59132375-59208121	0	-	59132375	59132375	8553170	3	371,100,111,	0,855,75635,
#Partially deleted in new
chr1	59132375	59203468	chr1:59132375-59203468	0	-	59132375	59132375	8553170	3	371,100,374,	0,855,70719,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	59132375	59208087	chr1:59132375-59208087	0	-	59132375	59132375	8553170	5	371,100,330,212,77,	0,855,65807,70719,75635,
#Partially deleted in new
chr1	59132472	59146827	chr1:59132472-59146827	0	-	59132472	59132472	8553170	2	858,152,	0,14203,
#Partially deleted in new
chr1	59132472	59240555	chr1:59132472-59240555	1	+	59132472	59132472	8553170	5	109,150,92,275,248,	0,51958,68894,70938,107835,
#Partially deleted in new
chr1	59132472	59151241	chr1:59132472-59151241	0	-	59132472	59132472	8553170	3	274,100,122,	0,758,18647,
#Partially deleted in new
chr1	59132472	59150550	chr1:59132472-59150550	0	+	59132472	59132472	8553170	2	109,650,	0,17428,
#Partially deleted in new
chr1	59132513	59198621	chr1:59132513-59198621	1	-	59132513	59132513	8553170	3	233,100,439,	0,717,65669,
#Deleted in new
chr1	59289302	59289640	chr1:59289302-59289640	3	-	59289302	59289302	8553170	1	338,	0,
#Partially deleted in new
chr1	59296637	59321712	chr1:59296637-59321712	0	+	59321549	59321712	789624	3	270,116,177,	0,21955,24898,
#Partially deleted in new
chr1	59296794	59378837	chr1:59296794-59378837	0	+	59321549	59378837	789624	5	113,215,112,152,89,	0,24741,43163,49452,81954,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	59296806	59810647	chr1:59296806-59810647	0	+	59346269	59660231	789624	17	101,112,152,89,116,129,104,108,62,75,121,95,62,167,270,74,2235,	0,43151,49440,81942,160154,215504,257317,310996,329181,363412,370476,377232,461124,465696,475961,477244,511606,
#Partially deleted in new
chr1	59296837	59660293	chr1:59296837-59660293	0	+	59296837	59296837	8553170	9	70,152,89,116,129,104,108,62,75,	0,49409,81911,160123,215473,257286,310965,329150,363381,
#Partially deleted in new
chr1	59296854	59346369	chr1:59296854-59346369	0	+	59296854	59296854	8553170	5	53,215,190,112,123,	0,24681,34988,43103,49392,
#Partially deleted in new
chr1	59296980	59762724	chr1:59296980-59762724	1	+	59321549	59762584	789624	17	170,215,112,152,89,116,129,104,108,62,148,72,75,121,95,62,222,	0,24555,42977,49266,81768,159980,215330,257143,310822,329007,341247,344299,363238,370302,377058,460950,465522,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	59296983	59626854	chr1:59296983-59626854	0	+	59296983	59296983	8553170	9	167,215,152,89,116,129,104,108,867,	0,24552,49263,81765,159977,215327,257140,310819,329004,
#Partially deleted in new
chr1	59296985	59316306	chr1:59296985-59316306	0	+	59296985	59296985	8553170	3	165,145,161,	0,18606,19160,
#Partially deleted in new
chr1	59296990	59762730	chr1:59296990-59762730	3	+	59321549	59762584	789624	16	160,215,112,152,89,116,129,104,108,62,148,75,121,95,62,228,	0,24545,42967,49256,81758,159970,215320,257133,310812,328997,341237,363228,370292,377048,460940,465512,
#Partially deleted in new
chr1	59297011	59699394	chr1:59297011-59699394	0	+	59321549	59697659	789624	17	139,17,215,112,152,89,116,129,104,108,62,148,75,121,95,93,710,	0,18708,24524,42946,49235,81737,159949,215299,257112,310791,328976,341216,363207,370271,377027,400636,401673,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	59297093	59791606	chr1:59297093-59791606	0	+	59321549	59772800	789624	20	57,145,184,116,215,112,152,89,116,129,104,108,62,148,75,121,95,270,74,2988,	0,18498,19052,21499,24442,42864,49153,81655,159867,215217,257030,310709,328894,341134,363125,370189,376945,475674,476957,491525,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	59310013	59788810	chr1:59310013-59788810	0	+	59457030	59660231	789624	14	163,116,129,104,108,62,75,121,95,62,167,270,74,192,	0,146947,202297,244110,297789,315974,350205,357269,364025,447917,452489,462754,464037,478605,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	59310063	59788840	chr1:59310063-59788840	0	+	59321549	59378774	789624	20	113,215,112,89,116,101,129,104,108,62,148,72,75,121,95,62,167,270,74,222,	0,11472,29894,68685,146897,164038,202247,244060,297739,315924,328164,331216,350155,357219,363975,447867,452439,462704,463987,478555,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	59310069	59791787	chr1:59310069-59791787	0	+	59321549	59457034	789624	13	107,215,112,116,129,108,62,75,121,95,270,74,3169,	0,11466,29888,146891,202241,297733,315918,350149,357213,363969,462698,463981,478549,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	59310069	59788848	chr1:59310069-59788848	0	+	59321549	59762584	789624	17	107,215,89,116,129,104,108,62,148,75,121,95,62,167,270,74,230,	0,11466,68679,146891,202241,244054,297733,315918,328158,350149,357213,363969,447861,452433,462698,463981,478549,
#Partially deleted in new
chr1	59310086	59762728	chr1:59310086-59762728	1	+	59321549	59762584	789624	14	90,215,89,116,129,104,108,62,148,75,121,95,62,226,	0,11449,68662,146874,202224,244037,297716,315901,328141,350132,357196,363952,447844,452416,
#Partially deleted in new
chr1	59393207	59626023	chr1:59393207-59626023	0	+	59393207	59393207	8553170	6	87,116,129,104,108,36,	0,63753,119103,160916,214595,232780,
#Partially deleted in new
chr1	59512315	59660423	chr1:59512315-59660423	0	+	59512315	59512315	8553170	5	124,104,108,62,205,	0,41808,95487,113672,147903,
#Partially deleted in new
chr1	59553917	59762728	chr1:59553917-59762728	1	+	59554221	59762584	789624	10	40,104,108,62,148,75,121,95,62,226,	0,206,53885,72070,84310,106301,113365,120121,204013,208585,
#Partially deleted in new
chr1	59626014	59762730	chr1:59626014-59762730	0	+	59626014	59626014	8553170	6	35,148,75,121,62,228,	0,12213,34204,41268,131916,136488,
#Partially deleted in new
chr1	59638227	59680995	chr1:59638227-59680995	0	+	59638227	59638227	8553170	5	148,75,121,95,317,	0,21991,29055,35811,42451,
#Partially deleted in new
chr1	59660218	59767675	chr1:59660218-59767675	0	+	59660218	59660218	8553170	3	75,62,486,	0,97712,106971,
#Partially deleted in new
chr1	59673656	59762544	chr1:59673656-59762544	0	+	59673656	59673656	8553170	4	134,95,62,42,	0,382,84274,88846,
#Partially deleted in new
chr1	59673685	59762727	chr1:59673685-59762727	0	+	59673685	59673685	8553170	4	110,95,62,225,	0,353,84245,88817,
#Deleted in new
chr1	59733226	59733296	chr1:59733226-59733296	3	-	59733226	59733226	5263520	1	70,	0,
#Partially deleted in new
chr1	59754746	59789182	chr1:59754746-59789182	3	-	59754746	59754746	8553170	2	661,106,	0,34330,
#Partially deleted in new
chr1	59755671	59762724	chr1:59755671-59762724	0	+	59755671	59755671	8553170	3	392,62,222,	0,2259,6831,
#Partially deleted in new
chr1	59814785	59835350	chr1:59814785-59835350	0	+	59815117	59835350	789624	7	25,145,86,73,51,133,6,	0,250,7072,13994,17377,18619,20559,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr1	59814860	59876378	chr1:59814860-59876378	3	+	59815117	59872965	789624	22	320,86,73,51,133,68,63,84,167,141,202,111,88,61,141,94,35,83,101,102,69,3584,	0,6997,13919,17302,18544,20484,22012,25447,28571,32184,33454,34212,43567,44124,45327,47923,49771,50302,51011,53389,56181,57934,
#Partially deleted in new
chr1	59815171	59873007	chr1:59815171-59873007	0	+	59815171	59815171	8553170	20	180,86,73,51,133,68,63,84,167,141,202,111,88,61,141,94,101,102,69,213,	0,6686,13608,16991,18233,20173,21701,25136,28260,31873,33143,33901,43256,43813,45016,47612,50700,53078,55870,57623,
#Partially deleted in new
chr1	59860282	59863868	chr1:59860282-59863868	0	+	59860282	59860282	8553170	3	46,94,44,	0,2501,3542,
#Partially deleted in new
chr1	59864638	59872978	chr1:59864638-59872978	0	+	59864638	59864638	8553170	5	607,101,102,69,184,	0,1233,3611,6403,8156,
#Partially deleted in new
chr1	59870876	59872982	chr1:59870876-59872982	0	+	59870876	59870876	8553170	2	234,188,	0,1918,
#Partially deleted in new
chr1	59893307	59926790	chr1:59893307-59926790	3	-	59893650	59926746	789624	9	522,139,188,142,177,161,150,163,254,	0,7657,11563,14478,16476,18300,18854,22630,33229,
#Partially deleted in new
chr1	59893315	59913238	chr1:59893315-59913238	0	-	59893315	59893315	8553170	8	514,139,151,188,142,177,161,1077,	0,7649,11050,11555,14470,16468,18292,18846,
#Partially deleted in new
chr1	59893316	59926755	chr1:59893316-59926755	0	-	59916071	59926746	8553170	10	513,139,151,188,142,177,161,150,163,235,	0,7648,11049,11554,14469,16467,18291,18845,22621,33204,
#Partially deleted in new
chr1	59893319	59926761	chr1:59893319-59926761	0	-	59901038	59926746	789624	8	510,139,142,177,161,150,163,225,	0,7645,14466,16464,18288,18842,22618,33217,
#Partially deleted in new
chr1	59893319	59926761	chr1:59893319-59926761	0	-	59904498	59926746	789624	10	510,139,151,188,142,177,161,150,163,225,	0,7645,11046,11551,14466,16464,18288,18842,22618,33217,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	59974756	59975054	chr1:59974756-59975054	3	-	59974756	59974756	8553170	1	298,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	59987268	60008852	chr1:59987268-60008852	0	-	59987268	59987268	8553170	6	754,83,1682,208,80,205,	0,1217,1883,10340,13808,21379,
#Partially deleted in new
chr1	59990393	60073770	chr1:59990393-60073770	3	-	59990672	60072643	789624	12	440,208,80,65,98,166,116,264,141,235,134,81,	0,7215,10683,19998,35007,43082,47598,49523,50597,64810,82143,83296,
#Partially deleted in new
chr1	59990393	60073736	chr1:59990393-60073736	1	-	59990672	60072643	789624	8	440,208,80,65,98,235,134,47,	0,7215,10683,19998,35007,64810,82143,83296,
#Partially deleted in new
chr1	59990396	60008845	chr1:59990396-60008845	0	-	59990396	59990396	8553170	4	437,208,80,133,	0,7212,10680,18316,
#Partially deleted in new
chr1	59990799	60010954	chr1:59990799-60010954	0	-	59990799	59990799	8553170	5	34,208,80,65,110,	0,6809,10277,19592,20045,
#Deleted in new
chr1	60097414	60097976	chr1:60097414-60097976	7	+	60097414	60097414	16724991	1	562,	0,
#Partially deleted in new
chr1	60114874	60149679	chr1:60114874-60149679	3	+	60114874	60114874	8553170	3	99,141,443,	0,33638,34362,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	60515715	60622685	chr1:60515715-60622685	3	-	60515715	60515715	789624	8	1323,331,185,115,126,836,124,189,	0,13203,24533,26581,72321,79822,84411,106781,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	60519962	60596206	chr1:60519962-60596206	1	-	60519962	60519962	8553170	7	4144,331,108,185,115,126,669,	0,8956,17718,20286,22334,68074,75575,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	60539094	60622532	chr1:60539094-60622532	1	-	60539094	60539094	8553170	8	1339,115,96,126,162,125,144,36,	0,3202,15378,48942,56443,57154,61032,83402,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	60540249	60601677	chr1:60540249-60601677	1	-	60540249	60540249	8553170	6	184,122,45,126,836,1551,	0,2040,3227,47787,55288,59877,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	60659630	60825584	chr1:60659630-60825584	0	-	60659630	60659630	789624	6	1840,41,93,62,59,249,	0,3354,69944,72816,73833,165705,
#Partially deleted in new
chr1	60660226	60867998	chr1:60660226-60867998	3	-	60660226	60660226	8553170	9	1244,41,217,93,62,59,50,164,82,	0,2758,16969,69348,72220,73237,165109,166195,207690,
#Partially deleted in new
chr1	60667106	60867976	chr1:60667106-60867976	1	-	60667106	60667106	8553170	10	1229,217,182,67,93,62,59,50,164,60,	0,10089,37671,59303,62468,65340,66357,158229,159315,200810,
#Partially deleted in new
chr1	60865258	61455525	chr1:60865258-61455525	1	+	60865370	61455320	789624	11	208,532,66,75,118,128,129,179,166,92,223,	0,222890,412261,467253,487191,493888,517978,538845,541303,561206,590044,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	60940238	60970776	chr1:60940238-60970776	3	-	60940238	60940238	789624	7	393,73,174,49,118,239,229,	0,941,12272,14083,14246,23327,30309,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	60940394	60952849	chr1:60940394-60952849	0	-	60940394	60940394	8553170	3	237,73,339,	0,785,12116,
#Partially deleted in new
chr1	60954053	60970745	chr1:60954053-60970745	1	-	60954053	60954053	789624	4	317,118,135,198,	0,431,15877,16494,
#Partially deleted in new
chr1	61053829	61332586	chr1:61053829-61332586	0	+	61088262	61332586	789624	4	57,532,66,75,	0,34319,223690,278682,
#Partially deleted in new
chr1	61077273	61455585	chr1:61077273-61455585	1	+	61077625	61455320	789624	11	355,532,66,75,118,128,129,179,166,92,283,	0,10875,200246,255238,275176,281873,305963,326830,329288,349191,378029,
#Partially deleted in new
chr1	61081766	61406727	chr1:61081766-61406727	0	+	61081766	61081766	8553170	8	149,66,75,118,128,129,179,166,	0,195753,250745,270683,277380,301470,322337,324795,
#Partially deleted in new
chr1	61081861	61455562	chr1:61081861-61455562	1	+	61081943	61455320	789624	12	186,58,532,66,75,118,128,129,179,166,92,260,	0,899,6287,195658,250650,270588,277285,301375,322242,324700,344603,373441,
#Partially deleted in new
chr1	61082307	61462793	chr1:61082307-61462793	1	+	61082791	61455320	789624	11	511,532,66,75,118,128,129,179,166,92,7491,	0,5841,195212,250204,270142,276839,300929,321796,324254,344157,372995,
#Partially deleted in new
chr1	61082620	61456394	chr1:61082620-61456394	3	+	61082791	61455379	789624	10	198,532,66,75,118,128,129,179,166,1092,	0,5528,194899,249891,269829,276526,300616,321483,323941,372682,
#Partially deleted in new
chr1	61082722	61455524	chr1:61082722-61455524	1	+	61082791	61455320	789624	10	96,532,66,75,118,128,179,166,92,222,	0,5426,194797,249789,269727,276424,321381,323839,343742,372580,
#Partially deleted in new
chr1	61082747	61455526	chr1:61082747-61455526	1	+	61082791	61455320	789624	10	71,532,75,118,128,129,179,166,92,224,	0,5401,249764,269702,276399,300489,321356,323814,343717,372555,
#Partially deleted in new
chr1	61082753	61455487	chr1:61082753-61455487	1	+	61082791	61455320	789624	7	65,532,129,179,166,92,185,	0,5395,300483,321350,323808,343711,372549,
#Partially deleted in new
chr1	61088411	61133028	chr1:61088411-61133028	0	+	61088411	61132711	789624	2	269,334,	0,44283,
#Deleted in new
chr1	61124732	61125202	chr1:61124732-61125202	3	+	61124732	61124732	8553170	1	470,	0,
#Partially deleted in new
chr1	61248944	61253510	chr1:61248944-61253510	3	-	61248944	61248944	789624	4	165,34,85,100,	0,1003,2340,4466,
#Partially deleted in new
chr1	61248964	61253510	chr1:61248964-61253510	0	-	61248964	61248964	8553170	2	145,100,	0,4446,
#Partially deleted in new
chr1	61248993	61253510	chr1:61248993-61253510	0	-	61248993	61248993	8553170	3	116,85,100,	0,2291,4417,
#Partially deleted in new
chr1	61248993	61253510	chr1:61248993-61253510	0	-	61248993	61248993	8553170	4	116,34,123,100,	0,954,2291,4417,
#Partially deleted in new
chr1	61248995	61253510	chr1:61248995-61253510	0	-	61248995	61248995	8553170	4	114,181,85,100,	0,952,2289,4415,
#Partially deleted in new
chr1	61248997	61253484	chr1:61248997-61253484	1	-	61248997	61248997	8553170	3	112,34,74,	0,950,4413,
#Partially deleted in new
chr1	61251011	61253484	chr1:61251011-61253484	0	-	61251011	61251011	8553170	2	358,74,	0,2399,
#Partially deleted in new
chr1	61352449	61404226	chr1:61352449-61404226	0	+	61352449	61404226	789624	5	118,128,129,54,123,	0,6697,30787,33421,51654,
#Partially deleted in new
chr1	61404075	61458037	chr1:61404075-61458037	1	+	61404084	61455320	789624	4	207,166,92,2735,	0,2486,22389,51227,
#Partially deleted in new
chr1	61406671	61455874	chr1:61406671-61455874	0	+	61406671	61455320	789624	3	56,68,572,	0,32779,48631,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	61481086	61533271	chr1:61481086-61533271	3	+	61481086	61481086	8553170	3	152,155,2135,	0,42872,50050,
#Deleted in new
chr1	61654193	61654908	chr1:61654193-61654908	7	+	61654193	61654193	16724991	1	715,	0,
#Partially deleted in new
chr1	61681045	61725141	chr1:61681045-61725141	3	-	61683435	61725120	789624	7	305,130,74,92,109,74,185,	0,2371,13651,19888,28283,42667,43911,
#Partially deleted in new
chr1	61681046	61725423	chr1:61681046-61725423	1	-	61683435	61725120	789624	7	304,130,74,92,109,72,469,	0,2370,13650,19887,28282,42666,43908,
#Partially deleted in new
chr1	61681047	61683857	chr1:61681047-61683857	0	-	61681047	61681047	8553170	2	303,441,	0,2369,
#Partially deleted in new
chr1	61681048	61725423	chr1:61681048-61725423	1	-	61683435	61725306	789624	7	302,130,74,92,109,74,467,	0,2368,13648,19885,28280,42664,43908,
#Partially deleted in new
chr1	61683271	61709418	chr1:61683271-61709418	0	-	61683271	61683271	8553170	4	275,74,92,90,	0,11425,17662,26057,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	61683451	61696241	chr1:61683451-61696241	0	-	61683451	61683451	8553170	4	95,130,74,177,	0,3340,11245,12613,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	61683496	61725067	chr1:61683496-61725067	0	-	61723760	61725067	789624	7	50,104,74,92,109,60,148,	0,3295,11200,17437,25832,40216,41423,
#Partially deleted in new
chr1	61694153	61725120	chr1:61694153-61725120	0	-	61694153	61694153	8553170	5	617,92,109,74,164,	0,6780,15175,29559,30803,
#Partially deleted in new
chr1	61694697	61725144	chr1:61694697-61725144	0	-	61723760	61725120	789624	5	73,92,109,60,243,	0,6236,14631,29015,30204,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	61697508	61725133	chr1:61697508-61725133	1	-	61700152	61725120	789624	5	2766,92,109,74,177,	0,3425,11820,26204,27448,
#Partially deleted in new
chr1	61741997	61742424	chr1:61741997-61742424	3	-	61741997	61741997	8553170	1	427,	0,
#Boundary problem: need 44, got 0, diff 44, mapped 0.0
chr1	61742405	62163950	chr1:61742405-62163950	3	+	61762892	62161054	789624	44	150,57,167,195,140,196,129,219,100,92,142,147,77,57,135,162,132,210,117,396,124,172,72,178,111,78,100,197,92,73,93,118,134,84,194,148,87,115,38,123,105,107,124,3043,	0,20452,20607,23873,26877,29025,32800,45348,48942,53061,54881,59217,63042,66068,80539,85016,91248,113624,119145,121832,132837,141831,157177,158876,165966,172181,185324,247762,275450,295571,308560,337044,342109,366031,371647,374126,374726,378775,380615,385566,386435,405878,410952,418502,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr1	61742476	61918076	chr1:61742476-61918076	1	+	61762892	61918076	789624	26	79,57,167,195,140,196,129,219,100,92,142,147,77,57,135,162,132,210,117,396,124,172,72,178,109,53,	0,20381,20536,23802,26806,28954,32729,45277,48871,52990,54810,59146,62971,65997,80468,84945,91177,113553,119074,121761,132766,141760,157106,158805,165895,175547,
#Boundary problem: need 43, got 0, diff 43, mapped 0.0
chr1	61742476	62163920	chr1:61742476-62163920	1	+	61762892	62160935	0	43	79,57,167,195,140,196,129,219,100,92,142,147,77,57,135,162,132,210,117,396,124,172,72,178,111,78,100,197,92,73,93,118,134,84,194,148,87,115,38,123,105,107,3013,	0,20381,20536,23802,26806,28954,32729,45277,48871,52990,54810,59146,62971,65997,80468,84945,91177,113553,119074,121761,132766,141760,157106,158805,165895,172110,185253,247691,275379,295500,308489,336973,342038,365960,371576,374055,374655,378704,380544,385495,386364,405807,418431,
#Partially deleted in new
chr1	61742476	62114910	chr1:61742476-62114910	0	+	61742476	61742476	8553170	34	79,57,167,195,140,196,129,219,100,92,142,147,77,57,135,162,132,210,117,396,124,172,72,178,111,78,100,197,92,73,93,118,134,858,	0,20381,20536,23802,26806,28954,32729,45277,48871,52990,54810,59146,62971,65997,80468,84945,91177,113553,119074,121761,132766,141760,157106,158805,165895,172110,185253,247691,275379,295500,308489,336973,342038,371576,
#Partially deleted in new
chr1	61742476	62114925	chr1:61742476-62114925	0	+	61742476	61742476	8553170	35	79,57,167,195,140,196,129,219,100,92,142,147,77,57,135,162,132,210,117,396,124,172,72,178,111,78,100,197,92,73,93,118,134,84,873,	0,20381,20536,23802,26806,28954,32729,45277,48871,52990,54810,59146,62971,65997,80468,84945,91177,113553,119074,121761,132766,141760,157106,158805,165895,172110,185253,247691,275379,295500,308489,336973,342038,365960,371576,
#Boundary problem: need 36, got 0, diff 36, mapped 0.0
chr1	61742476	62114250	chr1:61742476-62114250	0	+	61742476	61742476	8553170	36	79,57,167,195,140,196,129,219,100,92,142,147,77,57,135,162,132,210,117,396,124,172,72,178,111,78,100,197,92,73,93,118,134,90,84,198,	0,20381,20536,23802,26806,28954,32729,45277,48871,52990,54810,59146,62971,65997,80468,84945,91177,113553,119074,121761,132766,141760,157106,158805,165895,172110,185253,247691,275379,295500,308489,336973,342038,357842,365960,371576,
#Partially deleted in new
chr1	61742544	62114767	chr1:61742544-62114767	0	+	61762892	61833705	789624	36	11,57,167,195,140,196,129,219,100,92,142,147,77,57,135,162,20,132,210,117,396,124,172,72,178,111,78,100,197,92,73,93,118,134,84,715,	0,20313,20468,23734,26738,28886,32661,45209,48803,52922,54742,59078,62903,65929,80400,84877,90813,91109,113485,119006,121693,132698,141692,157038,158737,165827,172042,185185,247623,275311,295432,308421,336905,341970,365892,371508,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr1	61805509	62163504	chr1:61805509-62163504	0	+	61805521	62123048	0	33	15,57,135,162,132,210,117,396,124,172,72,178,111,78,100,197,92,73,93,118,134,84,194,148,87,110,38,123,105,107,124,482,622,	0,2964,17435,21912,28144,50520,56041,58728,69733,78727,94073,95772,102862,109077,122220,184658,212346,232467,245456,273940,279005,302927,308543,311022,311622,315676,317511,322462,323331,342774,347848,355398,357373,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	61816418	61816522	chr1:61816418-61816522	3	+	61816418	61816418	8553170	1	104,	0,
#Deleted in new
chr1	61852498	61852602	chr1:61852498-61852602	3	+	61852498	61852498	8553170	1	104,	0,
#Partially deleted in new
chr1	61864390	61875531	chr1:61864390-61875531	0	+	61864390	61864390	8553170	2	243,289,	0,10852,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	61864430	61865611	chr1:61864430-61865611	0	+	61864430	61864430	8553170	2	203,371,	0,810,
#Partially deleted in new
chr1	61908454	61991779	chr1:61908454-61991779	0	+	61908454	61991517	789624	5	28,78,100,197,298,	0,6132,19275,81713,83027,
#Partially deleted in new
chr1	61914646	61990436	chr1:61914646-61990436	0	+	61914646	61990385	789624	3	18,100,269,	0,13083,75521,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	61952052	62163950	chr1:61952052-62163950	1	+	61952389	62161054	789624	18	359,197,92,73,93,118,134,84,194,148,87,115,38,123,105,107,124,3043,	0,38115,65803,85924,98913,127397,132462,156384,162000,164479,165079,169128,170968,175919,176788,196231,201305,208855,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	61952074	62178675	chr1:61952074-62178675	1	+	61952389	62178474	789624	17	337,197,92,73,93,118,134,84,194,148,87,115,38,123,105,107,253,	0,38093,65781,85902,98891,127375,132440,156362,161978,164457,165057,169106,170946,175897,176766,196209,226348,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	61952311	62117393	chr1:61952311-62117393	1	+	61952389	62117245	789624	12	100,197,92,73,93,118,134,90,84,194,148,262,	0,37856,65544,85665,98654,127138,132203,148007,156125,161741,164220,164820,
#Deleted in new
chr1	62038841	62039111	chr1:62038841-62039111	7	+	62038841	62038841	16724991	1	270,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	62072447	62072741	chr1:62072447-62072741	3	+	62072447	62072447	8553170	1	294,	0,
#Deleted in new
chr1	62078785	62078859	chr1:62078785-62078859	3	+	62078785	62078785	5263520	1	74,	0,
#Deleted in new
chr1	62078788	62078856	chr1:62078788-62078856	3	-	62078788	62078788	5263520	1	68,	0,
#Partially deleted in new
chr1	62114089	62117395	chr1:62114089-62117395	0	+	62114089	62117245	789624	3	157,148,264,	0,2442,3042,
#Partially deleted in new
chr1	62120873	62128457	chr1:62120873-62128457	0	+	62120873	62120873	8553170	3	422,38,486,	0,2147,7098,
#Partially deleted in new
chr1	62189130	62189953	chr1:62189130-62189953	7	+	62189130	62189130	16724991	2	373,85,	0,738,
#Deleted in new
chr1	62190521	62190926	chr1:62190521-62190926	7	+	62190521	62190521	16724991	1	405,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	62194830	62212328	chr1:62194830-62212328	3	+	62206628	62211372	0	4	91,94,1118,2546,	0,1604,11688,14952,
#Deleted in new
chr1	62208135	62208442	chr1:62208135-62208442	7	-	62208135	62208135	16724991	1	307,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	62211556	62211666	chr1:62211556-62211666	3	+	62211556	62211556	8553170	1	110,	0,
#Partially deleted in new
chr1	62236978	62263424	chr1:62236978-62263424	1	-	62238276	62253162	789624	4	1403,201,143,333,	0,10493,16088,26113,
#Partially deleted in new
chr1	62236978	62319414	chr1:62236978-62319414	3	-	62238276	62281564	789624	10	1403,201,143,220,88,219,112,1884,86,309,	0,10493,16088,26113,29753,31308,34499,36225,44570,82127,
#Partially deleted in new
chr1	62237543	62319301	chr1:62237543-62319301	1	-	62238276	62281564	789624	9	838,201,143,220,88,219,112,86,196,	0,9928,15523,25548,29188,30743,33934,44005,81562,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	62237543	62272791	chr1:62237543-62272791	1	-	62238276	62271557	789624	7	838,201,143,220,88,219,1314,	0,9928,15523,25548,29188,30743,33934,
#Deleted in new
chr1	62298148	62298256	chr1:62298148-62298256	3	-	62298148	62298148	8553170	1	108,	0,
#Partially deleted in new
chr1	62436296	62443320	chr1:62436296-62443320	0	+	62439867	62443320	789624	5	266,239,121,105,162,	0,3502,5191,5898,6862,
#Partially deleted in new
chr1	62436297	62441580	chr1:62436297-62441580	0	+	62439867	62441580	789624	3	170,239,93,	0,3501,5190,
#Partially deleted in new
chr1	62436303	62451802	chr1:62436303-62451802	3	+	62439867	62450981	789624	9	259,239,121,105,161,692,171,202,1557,	0,3495,5184,5891,6855,8434,11037,12161,13942,
#Partially deleted in new
chr1	62436654	62451804	chr1:62436654-62451804	1	+	62439867	62450981	789624	9	746,239,121,105,161,692,171,202,1559,	0,3144,4833,5540,6504,8083,10686,11810,13591,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	62454297	62483038	chr1:62454297-62483038	0	-	62454297	62454297	8553170	8	1157,168,107,144,237,90,135,1640,	0,3240,19684,20910,21409,21769,23402,27101,
#Partially deleted in new
chr1	62454725	62688264	chr1:62454725-62688264	1	-	62455413	62688264	789624	50	731,168,107,144,237,90,126,15,132,144,193,101,159,153,135,97,97,136,183,155,170,140,171,114,141,96,90,93,170,165,232,87,102,139,71,118,163,94,143,166,81,150,67,86,213,130,69,176,106,38,	0,2812,19256,20482,20981,21341,22974,32672,34208,37978,39549,40855,41613,49904,50956,53236,55851,58745,58990,73425,74551,80767,83165,84819,85026,87882,88930,90221,98006,101099,104263,106891,122536,124102,128458,131781,163980,165174,170533,176514,178772,180047,181811,192965,193380,193689,198999,199258,208299,233501,
#Partially deleted in new
chr1	62454829	62688275	chr1:62454829-62688275	1	-	62455413	62688264	789624	49	627,168,107,144,237,90,135,132,144,193,101,159,153,135,97,97,136,183,155,170,140,171,114,141,96,90,93,170,165,232,87,102,139,71,118,163,94,143,166,81,150,67,86,213,130,69,176,106,49,	0,2708,19152,20378,20877,21237,22870,34104,37874,39445,40751,41509,49800,50852,53132,55747,58641,58886,73321,74447,80663,83061,84715,84922,87778,88826,90117,97902,100995,104159,106787,122432,123998,128354,131677,163876,165070,170429,176410,178668,179943,181707,192861,193276,193585,198895,199154,208195,233397,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	62454897	62459199	chr1:62454897-62459199	0	-	62454897	62454897	8553170	2	559,1662,	0,2640,
#Partially deleted in new
chr1	62455009	62511365	chr1:62455009-62511365	0	-	62455009	62455009	8553170	16	447,168,107,144,237,90,135,3407,144,193,101,159,153,135,97,789,	0,2528,18972,20198,20697,21057,22690,30649,37694,39265,40571,41329,49620,50672,52952,55567,
#Partially deleted in new
chr1	62455012	62688264	chr1:62455012-62688264	3	-	62455413	62688264	789624	49	444,168,107,144,237,90,126,15,132,144,193,101,159,153,135,97,97,163,183,155,170,140,171,114,141,96,90,170,165,232,87,102,139,71,118,163,94,143,166,81,150,67,86,213,130,69,176,106,38,	0,2525,18969,20195,20694,21054,22687,32385,33921,37691,39262,40568,41326,49617,50669,52949,55564,58431,58703,73138,74264,80480,82878,84532,84739,87595,88643,97719,100812,103976,106604,122249,123815,128171,131494,163693,164887,170246,176227,178485,179760,181524,192678,193093,193402,198712,198971,208012,233214,
#Partially deleted in new
chr1	62455032	62552761	chr1:62455032-62552761	0	-	62455413	62552761	789624	29	424,168,107,144,237,90,135,132,144,193,101,159,153,135,97,97,136,183,155,170,140,171,114,141,96,36,90,93,30,	0,2505,18949,20175,20674,21034,22667,33901,37671,39242,40548,41306,49597,50649,52929,55544,58438,58683,73118,74244,80460,82858,84512,84719,87575,88253,88623,89914,97699,
#Partially deleted in new
chr1	62455413	62688264	chr1:62455413-62688264	1	-	62455413	62688264	789624	49	43,168,107,144,237,90,126,15,132,144,193,101,159,153,135,97,97,136,183,155,170,140,171,114,141,96,90,170,165,232,87,102,139,71,118,163,94,143,166,81,150,67,86,213,130,69,176,106,38,	0,2124,18568,19794,20293,20653,22286,31984,33520,37290,38861,40167,40925,49216,50268,52548,55163,58057,58302,72737,73863,80079,82477,84131,84338,87194,88242,97318,100411,103575,106203,121848,123414,127770,131093,163292,164486,169845,175826,178084,179359,181123,192277,192692,193001,198311,198570,207611,232813,
#Partially deleted in new
chr1	62455413	62688264	chr1:62455413-62688264	1	-	62455413	62688264	789624	48	43,168,107,144,237,90,135,132,144,193,101,159,153,135,97,97,136,183,155,170,140,171,114,141,96,90,170,165,232,87,102,139,71,118,163,94,143,166,81,150,67,86,213,130,69,176,106,38,	0,2124,18568,19794,20293,20653,22286,33520,37290,38861,40167,40925,49216,50268,52548,55163,58057,58302,72737,73863,80079,82477,84131,84338,87194,88242,97318,100411,103575,106203,121848,123414,127770,131093,163292,164486,169845,175826,178084,179359,181123,192277,192692,193001,198311,198570,207611,232813,
#Partially deleted in new
chr1	62455413	62688264	chr1:62455413-62688264	1	-	62455413	62688264	789624	50	43,168,107,144,237,90,126,15,132,144,193,101,159,153,135,97,97,163,183,155,170,140,171,114,141,96,90,93,170,165,232,87,102,139,71,118,163,94,143,166,81,150,67,86,213,130,69,176,106,38,	0,2124,18568,19794,20293,20653,22286,31984,33520,37290,38861,40167,40925,49216,50268,52548,55163,58030,58302,72737,73863,80079,82477,84131,84338,87194,88242,89533,97318,100411,103575,106203,121848,123414,127770,131093,163292,164486,169845,175826,178084,179359,181123,192277,192692,193001,198311,198570,207611,232813,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	62460933	62474044	chr1:62460933-62474044	0	-	62460933	62460933	8553170	2	37,63,	0,13048,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	62474009	62479004	chr1:62474009-62479004	0	-	62474009	62474009	8553170	5	79,144,237,90,1305,	0,1198,1697,2057,3690,
#Deleted in new
chr1	62475211	62476189	chr1:62475211-62476189	0	-	62475211	62475211	8553170	2	732,123,	0,855,
#Partially deleted in new
chr1	62476144	62492760	chr1:62476144-62492760	0	-	62477763	62492760	789624	5	12,126,55,132,57,	0,1555,11253,12789,16559,
#Partially deleted in new
chr1	62477752	62481497	chr1:62477752-62481497	0	-	62477752	62477752	8553170	2	82,18,	0,3727,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	62478700	62481474	chr1:62478700-62481474	0	-	62478700	62478700	8553170	2	41,76,	0,2698,
#Partially deleted in new
chr1	62481468	62485563	chr1:62481468-62485563	0	-	62481468	62481468	8553170	2	64,36,	0,4059,
#Partially deleted in new
chr1	62481470	62485696	chr1:62481470-62485696	0	-	62481470	62481470	8553170	2	62,38,	0,4188,
#Boundary problem: need 43, got 0, diff 43, mapped 0.0
chr1	62482860	62688344	chr1:62482860-62688344	0	-	62578957	62688264	789624	43	2793,15,132,144,193,101,159,153,135,97,97,136,183,155,170,140,171,114,141,96,90,93,170,165,232,87,102,139,118,163,94,143,166,81,150,67,86,213,130,69,176,106,118,	0,4537,6073,9843,11414,12720,13478,21769,22821,25101,27716,30610,30855,45290,46416,52632,55030,56684,56891,59747,60795,62086,69871,72964,76128,78756,94401,95967,103646,135845,137039,142398,148379,150637,151912,153676,164830,165245,165554,170864,171123,180164,205366,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	62492305	62495298	chr1:62492305-62495298	0	-	62492305	62492305	8553170	2	542,1024,	0,1969,
#Partially deleted in new
chr1	62495846	62496380	chr1:62495846-62496380	0	-	62495846	62495846	8553170	2	58,42,	0,492,
#Partially deleted in new
chr1	62505790	62516841	chr1:62505790-62516841	0	-	62505790	62505790	8553170	6	26,97,97,136,183,41,	0,2171,4786,7680,7925,11010,
#Deleted in new
chr1	62530635	62530873	chr1:62530635-62530873	7	+	62530635	62530635	16724991	1	238,	0,
#Partially deleted in new
chr1	62539843	62561669	chr1:62539843-62561669	0	-	62539843	62561669	789624	6	49,96,170,165,232,53,	0,2764,12888,15981,19145,21773,
#Partially deleted in new
chr1	62542636	62561634	chr1:62542636-62561634	0	-	62542636	62561634	789624	6	67,93,170,165,232,18,	0,2310,10095,13188,16352,18980,
#Partially deleted in new
chr1	62543638	62552899	chr1:62543638-62552899	0	-	62543638	62543638	8553170	2	107,168,	0,9093,
#Partially deleted in new
chr1	62555290	62555886	chr1:62555290-62555886	0	-	62555290	62555290	8553170	2	38,62,	0,534,
#Partially deleted in new
chr1	62558997	62618717	chr1:62558997-62618717	0	-	62578957	62618717	789624	6	223,87,102,139,118,12,	0,2619,18264,19830,27509,59708,
#Partially deleted in new
chr1	62584104	62688368	chr1:62584104-62688368	1	-	62584779	62688264	789624	16	774,118,163,94,143,166,81,150,67,86,213,130,69,176,106,142,	0,2402,34601,35795,41154,47135,49393,50668,52432,63586,64001,64310,69620,69879,78920,104122,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	62584402	62653783	chr1:62584402-62653783	0	-	62633902	62653783	789624	14	476,118,163,94,143,166,81,36,150,67,86,213,130,59,	0,2104,34303,35497,40856,46837,49095,49497,50370,52134,63288,63703,64012,69322,
#Partially deleted in new
chr1	62597486	62606159	chr1:62597486-62606159	3	+	62597566	62604817	0	7	575,111,115,114,96,267,1527,	0,1209,3595,4282,4798,6482,7146,
#Partially deleted in new
chr1	62597522	62618786	chr1:62597522-62618786	0	-	62597522	62597522	8553170	2	19,81,	0,21183,
#Deleted in new
chr1	62601033	62602380	chr1:62601033-62602380	0	+	62601033	62601033	8553170	3	163,114,96,	0,735,1251,
#Deleted in new
chr1	62602319	62604658	chr1:62602319-62604658	0	+	62602319	62602319	8553170	2	61,690,	0,1649,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	62607765	62609584	chr1:62607765-62609584	3	+	62607765	62607765	8553170	1	1819,	0,
#Partially deleted in new
chr1	62625097	62633546	chr1:62625097-62633546	0	-	62625097	62633546	789624	3	304,166,49,	0,6142,8400,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	62627558	62663106	chr1:62627558-62663106	0	-	62629563	62663106	789624	11	2115,166,81,150,67,86,213,130,69,176,82,	0,3681,5939,7214,8978,20132,20547,20856,26166,26425,35466,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	62634376	62635691	chr1:62634376-62635691	0	-	62634376	62634376	8553170	1	1315,	0,
#Partially deleted in new
chr1	62638310	62647721	chr1:62638310-62647721	0	-	62638310	62638310	8553170	2	69,31,	0,9380,
#Partially deleted in new
chr1	62641121	62641667	chr1:62641121-62641667	7	-	62641121	62641121	16724991	1	546,	0,
#Partially deleted in new
chr1	62687590	62688282	chr1:62687590-62688282	0	-	62687590	62687590	8553170	2	66,56,	0,636,
#Partially deleted in new
chr1	62688481	62710694	chr1:62688481-62710694	3	+	62688481	62688481	8553170	2	171,1057,	0,21156,
#Partially deleted in new
chr1	62784134	62865513	chr1:62784134-62865513	1	+	62803786	62864159	789624	11	139,144,84,234,331,71,137,79,77,120,1522,	0,19584,21037,32440,34870,37004,44905,49903,50641,57293,79857,
#Partially deleted in new
chr1	62784134	62865513	chr1:62784134-62865513	3	+	62803786	62864159	789624	11	91,144,84,234,331,71,137,79,77,120,1522,	0,19584,21037,32440,34870,37004,44905,49903,50641,57293,79857,
#Partially deleted in new
chr1	62784134	62819065	chr1:62784134-62819065	0	+	62803786	62819065	789624	5	139,85,84,234,61,	0,19643,21037,32440,34870,
#Partially deleted in new
chr1	62785232	62819179	chr1:62785232-62819179	0	+	62803786	62819179	789624	5	28,144,84,234,175,	0,18486,19939,31342,33772,
#Partially deleted in new
chr1	62821182	62835529	chr1:62821182-62835529	0	+	62821182	62835397	789624	5	27,137,79,77,144,	0,7857,12855,13593,14203,
#Deleted in new
chr1	62905179	62905482	chr1:62905179-62905482	7	+	62905179	62905179	16724991	1	303,	0,
#Partially deleted in new
chr1	62975750	63011197	chr1:62975750-63011197	3	-	62975750	62975750	8553170	2	461,112,	0,35335,
#Partially deleted in new
chr1	63000496	63010925	chr1:63000496-63010925	0	-	63000496	63000496	789624	2	307,48,	0,10381,
#Partially deleted in new
chr1	63000496	63012471	chr1:63000496-63012471	0	-	63000496	63000496	789624	2	307,138,	0,11837,
#Partially deleted in new
chr1	63000496	63011268	chr1:63000496-63011268	0	-	63000496	63000496	789624	2	307,183,	0,10589,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	63012210	63022504	chr1:63012210-63022504	1	-	63012210	63012210	8553170	4	260,84,125,536,	0,4451,5823,9758,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	63024206	63025658	chr1:63024206-63025658	3	+	63024206	63024206	8553170	2	104,255,	0,1197,
#Partially deleted in new
chr1	63078080	63079031	chr1:63078080-63079031	3	-	63078080	63078080	8553170	2	25,132,	0,819,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	63139249	63163153	chr1:63139249-63163153	3	+	63139249	63139249	8553170	3	248,168,407,	0,19786,23497,
#Deleted in new
chr1	63159086	63160410	chr1:63159086-63160410	0	-	63159086	63159086	8553170	2	184,250,	0,1074,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	63159086	63317222	chr1:63159086-63317222	0	-	63159086	63159086	8553170	11	184,102,162,136,140,103,85,286,52,139,165,	0,1074,2317,3460,24353,26472,31353,39629,145608,156862,157971,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	63159087	63315986	chr1:63159087-63315986	0	-	63159087	63159087	8553170	7	183,102,162,136,112,52,38,	0,1073,2316,3459,5156,145607,156861,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	63159089	63317237	chr1:63159089-63317237	3	-	63159089	63159089	789624	11	181,102,162,136,273,140,85,286,52,139,180,	0,1071,2314,3457,11062,24350,31350,39626,145605,156859,157968,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	63169927	63315986	chr1:63169927-63315986	0	-	63169927	63169927	8553170	6	497,58,85,286,52,38,	0,1190,20512,28788,134767,146021,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	63170156	63315986	chr1:63170156-63315986	1	-	63170156	63170156	8553170	10	268,58,117,103,85,286,209,63,52,38,	0,961,1408,15402,20283,28559,30648,32948,134538,145792,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	63174471	63317274	chr1:63174471-63317274	1	-	63174471	63174471	8553170	8	176,140,103,85,305,52,139,217,	0,8968,11087,15968,24244,130223,141477,142586,
#Deleted in new
chr1	63186335	63186450	chr1:63186335-63186450	7	-	63186335	63186335	16724991	1	115,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	63189988	63316087	chr1:63189988-63316087	0	-	63189988	63189988	8553170	5	536,305,66,52,139,	0,8727,67996,114706,125960,
#Partially deleted in new
chr1	63222884	63261804	chr1:63222884-63261804	0	-	63222884	63222884	8553170	2	340,63,	0,38857,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	63249919	63251771	chr1:63249919-63251771	3	+	63249919	63249919	8553170	2	557,302,	0,1550,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	63257021	63317231	chr1:63257021-63317231	1	-	63257021	63257021	8553170	7	446,66,81,101,52,139,174,	0,963,4720,5578,47673,58927,60036,
#Deleted in new
chr1	63262112	63262707	chr1:63262112-63262707	7	+	63262112	63262112	16724991	1	595,	0,
#Deleted in new
chr1	63320883	63322436	chr1:63320883-63322436	3	-	63320883	63320883	789624	4	307,97,416,121,	0,483,781,1432,
#Deleted in new
chr1	63320883	63321529	chr1:63320883-63321529	0	-	63320883	63320883	8553170	2	307,163,	0,483,
#Deleted in new
chr1	63320883	63324441	chr1:63320883-63324441	0	-	63320883	63320883	789624	3	307,97,87,	0,483,3471,
#Deleted in new
chr1	63320883	63323582	chr1:63320883-63323582	0	-	63320883	63320883	789624	3	307,97,92,	0,483,2607,
#Deleted in new
chr1	63320883	63322458	chr1:63320883-63322458	0	-	63320883	63320883	789624	3	307,97,143,	0,483,1432,
#Deleted in new
chr1	63323040	63325126	chr1:63323040-63325126	3	+	63323058	63324495	789624	1	2086,	0,
#Deleted in new
chr1	63326924	63326984	chr1:63326924-63326984	3	-	63326924	63326924	5263520	1	60,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	63338262	63338372	chr1:63338262-63338372	3	+	63338262	63338262	8553170	1	110,	0,
#Deleted in new
chr1	63359822	63361179	chr1:63359822-63361179	7	-	63359822	63359822	16724991	1	1357,	0,
#Partially deleted in new
chr1	63367574	63437126	chr1:63367574-63437126	0	+	63370977	63411939	8553170	15	113,289,85,90,89,83,65,77,136,86,85,71,69,199,304,	0,3196,28938,34679,36878,38742,39487,43680,44351,46486,48298,51795,61158,61353,69248,
#Partially deleted in new
chr1	63367580	63437182	chr1:63367580-63437182	0	+	63370977	63415821	789624	15	107,289,85,90,89,83,65,186,136,86,140,71,69,199,360,	0,3190,28932,34673,36872,38736,39481,43565,44345,46480,48237,51789,61152,61347,69242,
#Partially deleted in new
chr1	63367589	63438562	chr1:63367589-63438562	3	+	63370977	63437020	789624	15	98,289,85,90,89,83,65,186,136,86,85,71,69,199,1740,	0,3181,28923,34664,36863,38727,39472,43556,44336,46471,48283,51780,61143,61338,69233,
#Partially deleted in new
chr1	63367602	63437176	chr1:63367602-63437176	0	+	63370977	63404466	8553170	14	85,289,90,89,83,65,186,136,86,85,71,69,199,354,	0,3168,34651,36850,38714,39459,43543,44323,46458,48270,51767,61130,61325,69220,
#Partially deleted in new
chr1	63367626	63437201	chr1:63367626-63437201	1	+	63370977	63437020	789624	15	61,289,85,90,89,83,65,186,136,86,85,71,69,199,379,	0,3144,28886,34627,36826,38690,39435,43519,44299,46434,48246,51743,61106,61301,69196,
#Partially deleted in new
chr1	63367626	63429075	chr1:63367626-63429075	0	+	63370977	63411943	8553170	14	61,289,85,90,89,83,65,10,136,86,140,71,69,148,	0,3144,28886,34627,36826,38690,39435,43519,44299,46434,48191,51743,61106,61301,
#Partially deleted in new
chr1	63367642	63437176	chr1:63367642-63437176	0	+	63370977	63411694	8553170	16	45,289,85,90,89,83,65,186,125,136,76,85,71,69,199,354,	0,3128,28870,34611,36810,38674,39419,43503,44039,44283,46428,48230,51727,61090,61285,69180,
#Partially deleted in new
chr1	63367649	63402342	chr1:63367649-63402342	0	+	63370977	63371109	789624	4	38,517,85,89,	0,3121,28863,34604,
#Partially deleted in new
chr1	63367736	63370939	chr1:63367736-63370939	0	+	63367736	63367736	8553170	2	454,169,	0,3034,
#Partially deleted in new
chr1	63413655	63429126	chr1:63413655-63429126	0	+	63413655	63413655	8553170	5	491,85,71,69,199,	0,2217,5714,15077,15272,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	63419393	63429829	chr1:63419393-63429829	0	+	63419393	63419393	8553170	4	47,69,199,314,	0,9339,9534,10122,
#Partially deleted in new
chr1	63428452	63437133	chr1:63428452-63437133	0	+	63428452	63428452	8553170	2	674,311,	0,8370,
#Partially deleted in new
chr1	63440769	63447060	chr1:63440769-63447060	0	-	63440769	63440769	8553170	2	334,255,	0,6036,
#Partially deleted in new
chr1	63440772	63523215	chr1:63440772-63523215	3	-	63446806	63523133	789624	9	331,51,57,94,79,70,136,43,87,	0,6033,13145,13607,14117,37991,49310,67755,82356,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	63440772	63523194	chr1:63440772-63523194	1	-	63446806	63523133	789624	10	331,51,57,94,79,70,136,43,117,66,	0,6033,13145,13607,14117,37991,49310,67755,69292,82356,
#Partially deleted in new
chr1	63440772	63523502	chr1:63440772-63523502	0	-	63447585	63523133	789624	10	331,51,50,57,94,79,70,136,43,374,	0,6033,6792,13145,13607,14117,37991,49310,67755,82356,
#Partially deleted in new
chr1	63440799	63457695	chr1:63440799-63457695	0	-	63440799	63440799	8553170	5	304,57,94,79,562,	0,13118,13580,14090,16334,
#Partially deleted in new
chr1	63442509	63454949	chr1:63442509-63454949	0	-	63442509	63442509	8553170	5	686,51,57,94,60,	0,4296,11408,11870,12380,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	63446557	63447789	chr1:63446557-63447789	0	-	63446557	63446557	8553170	2	299,225,	0,1007,
#Partially deleted in new
chr1	63449302	63490214	chr1:63449302-63490214	0	-	63449302	63449302	8553170	6	513,57,94,79,70,132,	0,4615,5077,5587,29461,40780,
#Partially deleted in new
chr1	63451724	63523182	chr1:63451724-63523182	0	-	63451724	63451724	8553170	8	340,57,94,79,70,136,43,54,	0,2193,2655,3165,27039,38358,56803,71404,
#Partially deleted in new
chr1	63453614	63523209	chr1:63453614-63523209	0	-	63453614	63453614	8553170	5	360,94,79,43,81,	0,765,1275,54913,69514,
#Partially deleted in new
chr1	63453775	63523255	chr1:63453775-63523255	0	-	63453775	63453775	8553170	7	56,57,94,79,70,136,127,	0,142,604,1114,24988,36307,69353,
#Partially deleted in new
chr1	63457464	63523201	chr1:63457464-63523201	0	-	63457464	63457464	8553170	3	909,43,73,	0,51063,65664,
#Partially deleted in new
chr1	63457683	63523201	chr1:63457683-63523201	0	-	63457683	63457683	8553170	5	690,70,136,43,73,	0,21080,32399,50844,65445,
#Partially deleted in new
chr1	63490102	63593721	chr1:63490102-63593721	0	-	63490102	63490102	8553170	5	116,43,92,56,197,	0,18425,37776,39028,103422,
#Partially deleted in new
chr1	63523371	63532696	chr1:63523371-63532696	0	+	63523371	63523371	8553170	4	198,188,212,27,	0,2200,8448,9298,
#Partially deleted in new
chr1	63523389	63572693	chr1:63523389-63572693	3	+	63525572	63572516	789624	14	245,188,212,87,196,122,142,110,158,134,149,210,108,252,	0,2182,8430,9280,10064,10705,22526,28335,31968,33724,38319,44920,47631,49052,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	63529612	63529898	chr1:63529612-63529898	3	-	63529612	63529612	8553170	1	286,	0,
#Deleted in new
chr1	63533576	63534367	chr1:63533576-63534367	0	+	63533576	63533576	8553170	2	73,273,	0,518,
#Partially deleted in new
chr1	63534132	63551886	chr1:63534132-63551886	0	+	63534132	63534132	8553170	3	84,142,162,	0,11783,17592,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	63536710	63536770	chr1:63536710-63536770	3	-	63536710	63536710	8553170	1	60,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	63547081	63550636	chr1:63547081-63550636	3	+	63547081	63547081	8553170	1	3555,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	63548008	63571128	chr1:63548008-63571128	0	+	63548008	63548008	8553170	7	342,43,110,135,149,210,108,	0,3039,3716,9104,13700,20301,23012,
#Deleted in new
chr1	63548976	63549112	chr1:63548976-63549112	3	-	63548976	63548976	8553170	1	136,	0,
#Deleted in new
chr1	63549132	63549216	chr1:63549132-63549216	3	-	63549132	63549132	8553170	1	84,	0,
#Deleted in new
chr1	63549226	63549284	chr1:63549226-63549284	3	-	63549226	63549226	8553170	1	58,	0,
#Deleted in new
chr1	63549293	63549366	chr1:63549293-63549366	3	-	63549293	63549293	8553170	1	73,	0,
#Deleted in new
chr1	63549373	63549463	chr1:63549373-63549463	3	-	63549373	63549373	8553170	1	90,	0,
#Deleted in new
chr1	63549488	63549608	chr1:63549488-63549608	3	-	63549488	63549488	8553170	1	120,	0,
#Partially deleted in new
chr1	63555074	63572693	chr1:63555074-63572693	0	+	63555074	63555074	8553170	5	441,134,149,2819,252,	0,2039,6634,13235,17367,
#Partially deleted in new
chr1	63593275	63660245	chr1:63593275-63660245	3	+	63593488	63659675	0	11	459,163,147,126,191,155,116,136,184,135,660,	0,36149,36666,38381,41553,42958,45409,55241,58393,61056,66310,
#Partially deleted in new
chr1	63593808	63660241	chr1:63593808-63660241	1	+	63631691	63659675	0	11	336,163,147,126,191,155,116,136,184,135,656,	0,35616,36133,37848,41020,42425,44876,54708,57860,60523,65777,
#Partially deleted in new
chr1	63594071	63600222	chr1:63594071-63600222	0	+	63594071	63594071	8553170	2	73,300,	0,5851,
#Partially deleted in new
chr1	63623092	63660221	chr1:63623092-63660221	1	+	63623460	63659675	0	11	668,163,147,126,191,155,116,136,184,135,636,	0,6332,6849,8564,11736,13141,15592,25424,28576,31239,36493,
#Deleted in new
chr1	63651354	63654445	chr1:63651354-63654445	0	+	63651354	63651354	8553170	2	498,114,	0,2977,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	63655742	63656047	chr1:63655742-63656047	3	+	63655742	63655742	8553170	1	305,	0,
#Partially deleted in new
chr1	63774021	64143385	chr1:63774021-64143385	1	+	63774417	64142658	0	7	487,72,288,31,128,318,981,	0,235283,275669,276664,363347,366087,368383,
#Partially deleted in new
chr1	63774042	64181498	chr1:63774042-64181498	3	+	63774417	64178855	0	9	466,72,288,31,128,318,246,212,4071,	0,235262,275648,276643,363326,366066,368362,384938,403385,
#Partially deleted in new
chr1	63775289	64140364	chr1:63775289-64140364	0	+	63775289	63775289	8553170	6	125,72,288,31,128,256,	0,234015,274401,275396,362079,364819,
#Deleted in new
chr1	63788720	63789304	chr1:63788720-63789304	7	-	63788720	63788720	16724991	1	584,	0,
#Deleted in new
chr1	63843195	63843685	chr1:63843195-63843685	7	-	63843195	63843195	16724991	1	490,	0,
#Partially deleted in new
chr1	64009302	64181492	chr1:64009302-64181492	1	+	64049692	64178855	789624	8	74,288,31,128,318,246,212,4065,	0,40388,41383,128066,130806,133102,149678,168125,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	64028893	64029000	chr1:64028893-64029000	3	-	64028893	64028893	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	64066639	64066741	chr1:64066639-64066741	3	-	64066639	64066639	8553170	1	102,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	64094441	64112205	chr1:64094441-64112205	1	-	64094441	64094441	789624	6	763,74,144,75,258,260,	0,13878,16208,16441,16670,17504,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	64105321	64171297	chr1:64105321-64171297	3	-	64105321	64105321	789624	5	1718,144,75,163,89,	0,5328,5561,8307,65887,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	64186790	64192685	chr1:64186790-64192685	3	+	64186790	64186790	8553170	2	179,852,	0,5043,
#Partially deleted in new
chr1	64203626	64260694	chr1:64203626-64260694	0	+	64204050	64260694	789624	9	490,82,93,98,118,49,89,82,92,	0,2012,3137,7115,11188,17232,28934,38025,56976,
#Partially deleted in new
chr1	64203626	64267368	chr1:64203626-64267368	1	+	64204050	64267208	0	10	490,82,93,98,118,49,89,82,92,357,	0,2012,3137,7115,11188,17232,28934,38025,56976,63385,
#Partially deleted in new
chr1	64203806	64244344	chr1:64203806-64244344	3	+	64204050	64244133	0	9	310,82,93,98,118,49,89,82,215,	0,1832,2957,6935,11008,17052,28754,37845,40323,
#Partially deleted in new
chr1	64214814	64267368	chr1:64214814-64267368	0	+	64214814	64267208	789624	6	118,49,89,82,92,345,	0,6044,17746,26837,45788,52209,
#Partially deleted in new
chr1	64215452	64244340	chr1:64215452-64244340	0	+	64215452	64215452	8553170	5	73,49,89,82,211,	0,5406,17108,26199,28677,
#Partially deleted in new
chr1	64220863	64267249	chr1:64220863-64267249	0	+	64220863	64267208	789624	4	44,82,92,226,	0,20788,39739,46160,
#Partially deleted in new
chr1	64384397	64384459	chr1:64384397-64384459	3	-	64384397	64384397	8553170	1	62,	0,
#Partially deleted in new
chr1	64470791	64693058	chr1:64470791-64693058	3	+	64470897	64691561	789624	27	151,63,149,107,127,145,217,150,234,150,124,118,169,143,182,111,123,100,117,161,87,117,152,162,78,102,1736,	0,79802,111364,132014,158563,161807,163252,171028,177009,181369,182966,183894,187913,192903,193706,195265,200772,202366,202556,204609,205105,206103,207367,208803,210466,211213,220531,
#Partially deleted in new
chr1	64505900	64693040	chr1:64505900-64693040	1	+	64582296	64691561	789624	27	587,63,149,107,127,145,217,150,234,150,124,118,169,143,182,111,123,100,117,161,87,117,152,162,78,102,1718,	0,44693,76255,96905,123454,126698,128143,135919,141900,146260,147857,148785,152804,157794,158597,160156,165663,167257,167447,169500,169996,170994,172258,173694,175357,176104,185422,
#Partially deleted in new
chr1	64505914	64693053	chr1:64505914-64693053	0	+	64505914	64505914	8553170	26	573,63,149,107,127,217,150,234,150,124,118,169,143,182,111,123,100,117,161,87,117,152,162,78,102,1731,	0,44679,76241,96891,123440,128129,135905,141886,146246,147843,148771,152790,157780,158583,160142,165649,167243,167433,169486,169982,170980,172244,173680,175343,176090,185408,
#Partially deleted in new
chr1	64563676	64693058	chr1:64563676-64693058	0	+	64563676	64563676	8553170	27	168,149,107,31,127,145,217,150,234,150,124,118,169,143,182,111,123,100,117,161,87,117,152,162,78,102,1736,	0,18479,39129,49811,65678,68922,70367,78143,84124,88484,90081,91009,95028,100018,100821,102380,107887,109481,109671,111724,112220,113218,114482,115918,117581,118328,127646,
#Deleted in new
chr1	64579846	64579923	chr1:64579846-64579923	3	+	64579846	64579846	5263520	1	77,	0,
#Partially deleted in new
chr1	64664199	64666140	chr1:64664199-64666140	0	+	64664199	64664199	8553170	2	480,84,	0,1857,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	64745094	64833229	chr1:64745094-64833229	1	+	64745172	64830985	0	12	327,67,470,192,127,86,105,115,269,112,137,2391,	0,23561,32528,36285,44293,57881,59639,59896,62111,67643,69609,85744,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	64745094	64833232	chr1:64745094-64833232	3	+	64745172	64830985	0	12	327,67,470,192,127,86,66,115,269,112,137,2394,	0,23561,32528,36285,44293,57881,59678,59896,62111,67643,69609,85744,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	64778065	64816509	chr1:64778065-64816509	0	+	64781475	64812748	789624	8	27,192,127,86,66,115,112,1806,	0,3314,11322,24910,26707,26925,34672,36638,
#Partially deleted in new
chr1	64833228	64966504	chr1:64833228-64966504	3	-	64834561	64886264	0	25	1429,111,118,173,125,193,95,151,152,136,128,88,144,107,190,124,158,186,343,164,154,124,199,83,172,	0,2167,2869,4703,5236,6374,8016,8222,10835,11525,12284,13420,14303,17575,22280,24427,26876,31558,33637,36082,40141,45796,50048,53030,133104,
#Partially deleted in new
chr1	64839495	64841258	chr1:64839495-64841258	0	-	64839495	64839495	8553170	2	300,14,	0,1749,
#Partially deleted in new
chr1	64841473	64848107	chr1:64841473-64848107	0	-	64841473	64841473	8553170	7	128,152,136,128,88,144,38,	0,2590,3280,4039,5175,6058,6596,
#Partially deleted in new
chr1	64844095	64846909	chr1:64844095-64846909	0	-	64844095	64844095	8553170	4	120,136,128,261,	0,658,1417,2553,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	64859641	64864856	chr1:64859641-64864856	0	-	64859641	64859641	8553170	2	621,70,	0,5145,
#Deleted in new
chr1	64875984	64879063	chr1:64875984-64879063	0	-	64875984	64875984	8553170	2	489,39,	0,3040,
#Deleted in new
chr1	64918442	64918683	chr1:64918442-64918683	7	+	64918442	64918442	16724991	1	241,	0,
#Deleted in new
chr1	64941978	64942365	chr1:64941978-64942365	7	+	64941978	64941978	16724991	1	387,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	64972224	64993012	chr1:64972224-64993012	1	-	64972224	64972224	8553170	4	888,141,60,1715,	0,2350,17210,19073,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	64972364	64990062	chr1:64972364-64990062	0	-	64972364	64972364	8553170	3	748,141,628,	0,2210,17070,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	64973657	64990841	chr1:64973657-64990841	0	-	64973657	64973657	8553170	2	1058,1407,	0,15777,
#Partially deleted in new
chr1	64984607	64986087	chr1:64984607-64986087	7	-	64984607	64984607	16724991	1	1480,	0,
#Partially deleted in new
chr1	64993002	65002437	chr1:64993002-65002437	1	-	64993002	64993002	8553170	3	579,102,29,	0,1984,9406,
#Partially deleted in new
chr1	64993202	65002450	chr1:64993202-65002450	1	-	64993202	64993202	8553170	4	153,110,102,122,	0,269,1784,9126,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	65003469	65004087	chr1:65003469-65004087	3	-	65003469	65003469	8553170	1	618,	0,
#Partially deleted in new
chr1	65022967	65023074	chr1:65022967-65023074	3	-	65022967	65022967	8553170	1	107,	0,
#Deleted in new
chr1	65057754	65057842	chr1:65057754-65057842	3	-	65057754	65057754	5263520	1	88,	0,
#Deleted in new
chr1	65058433	65058508	chr1:65058433-65058508	3	-	65058433	65058433	5263520	1	75,	0,
#Deleted in new
chr1	65066626	65067737	chr1:65066626-65067737	3	-	65066626	65066626	8553170	2	176,134,	0,977,
#Partially deleted in new
chr1	65077412	65078131	chr1:65077412-65078131	7	-	65077412	65077412	16724991	2	212,215,	0,504,
#Partially deleted in new
chr1	65092391	65092614	chr1:65092391-65092614	7	-	65092391	65092391	16724991	1	223,	0,
#Partially deleted in new
chr1	65147548	65226092	chr1:65147548-65226092	0	+	65147548	65147548	8553170	6	117,275,120,173,119,30,	0,729,43161,71205,77203,78514,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	65147548	65232145	chr1:65147548-65232145	3	+	65148407	65226177	0	6	117,275,120,173,119,6083,	0,729,43161,71205,77203,78514,
#Partially deleted in new
chr1	65147668	65224837	chr1:65147668-65224837	0	+	65147668	65147668	8553170	5	389,275,120,173,86,	0,609,43041,71085,77083,
#Partially deleted in new
chr1	65147669	65226891	chr1:65147669-65226891	1	+	65190720	65226177	789624	5	94,120,173,119,829,	0,43040,71084,77082,78393,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	65147829	65232145	chr1:65147829-65232145	1	+	65148407	65226177	0	6	228,275,120,173,119,6083,	0,448,42880,70924,76922,78233,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	65148202	65232136	chr1:65148202-65232136	1	+	65148407	65226177	0	5	350,120,173,119,6074,	0,42507,70551,76549,77860,
#Partially deleted in new
chr1	65149001	65226439	chr1:65149001-65226439	0	+	65149001	65149001	8553170	5	139,120,173,119,377,	0,41708,69752,75750,77061,
#Partially deleted in new
chr1	65154479	65154650	chr1:65154479-65154650	7	+	65154479	65154479	16724991	1	171,	0,
#Partially deleted in new
chr1	65165931	65226429	chr1:65165931-65226429	0	+	65165931	65165931	8553170	5	88,120,173,119,367,	0,24778,52822,58820,60131,
#Partially deleted in new
chr1	65248218	65366194	chr1:65248218-65366194	0	+	65248218	65248218	8553170	5	85,113,151,50,147,	0,97392,116416,117666,117829,
#Partially deleted in new
chr1	65254461	65392588	chr1:65254461-65392588	0	+	65254534	65392588	789624	12	188,151,50,149,123,134,195,118,80,194,81,158,	0,110173,111423,111586,124940,129731,131250,132350,133874,134794,135085,137969,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	65264693	65415869	chr1:65264693-65415869	1	+	65364651	65413025	789624	20	239,113,151,50,149,123,134,195,118,80,194,81,435,135,69,120,264,143,177,2946,	0,80917,99941,101191,101354,114708,119499,121018,122118,123642,124562,124853,127737,130204,134119,137067,141176,143947,146556,148230,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	65264753	65415869	chr1:65264753-65415869	3	+	65264910	65413025	789624	19	179,151,50,149,123,134,195,118,80,194,81,435,135,69,120,264,143,177,2946,	0,99881,101131,101294,114648,119439,120958,122058,123582,124502,124793,127677,130144,134059,137007,141116,143887,146496,148170,
#Partially deleted in new
chr1	65264763	65364761	chr1:65264763-65364761	0	+	65264763	65264763	8553170	3	169,113,127,	0,80847,99871,
#Partially deleted in new
chr1	65279455	65306521	chr1:65279455-65306521	3	-	65279455	65279455	8553170	2	423,89,	0,26977,
#Deleted in new
chr1	65298754	65298980	chr1:65298754-65298980	7	-	65298754	65298754	16724991	1	226,	0,
#Partially deleted in new
chr1	65309544	65415276	chr1:65309544-65415276	1	+	65309745	65413025	789624	19	394,151,50,149,123,134,195,118,80,194,81,435,135,69,120,264,143,177,2353,	0,55090,56340,56503,69857,74648,76167,77267,78791,79711,80002,82886,85353,89268,92216,96325,99096,101705,103379,
#Partially deleted in new
chr1	65366064	65379788	chr1:65366064-65379788	0	+	65366064	65366064	8553170	2	132,387,	0,13337,
#Partially deleted in new
chr1	65384085	65388403	chr1:65384085-65388403	0	+	65384085	65384085	8553170	4	241,195,118,68,	0,1626,2726,4250,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	65415815	65416006	chr1:65415815-65416006	3	+	65415815	65415815	8553170	1	191,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	65420586	65436007	chr1:65420586-65436007	3	+	65420724	65431919	789624	4	154,76,187,4205,	0,4716,9275,11216,
#Partially deleted in new
chr1	65420586	65432064	chr1:65420586-65432064	1	+	65420724	65431932	8553170	3	154,76,262,	0,4716,11216,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	65420651	65641559	chr1:65420651-65641559	3	+	65565565	65637015	0	20	89,76,60,330,124,209,146,145,291,118,200,149,160,83,217,183,96,106,76,5369,	0,4651,144894,149821,151674,172005,175796,178008,180740,181191,184386,188101,189295,189562,195356,197312,199276,200701,202254,215539,
#Partially deleted in new
chr1	65420651	65635428	chr1:65420651-65635428	1	+	65565565	65633169	0	20	89,76,60,330,124,209,146,145,291,118,200,149,160,83,217,183,96,106,76,2277,	0,4651,144894,149821,151674,172005,175796,178008,180740,181191,184386,188101,189295,189562,195356,197312,199276,200701,202254,212500,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	65420667	65428009	chr1:65420667-65428009	0	+	65420667	65420667	8553170	3	73,76,228,	0,4635,7114,
#Partially deleted in new
chr1	65420707	65431920	chr1:65420707-65431920	1	+	65420724	65431919	8553170	4	33,76,118,118,	0,4595,9223,11095,
#Partially deleted in new
chr1	65420709	65430303	chr1:65420709-65430303	1	+	65420724	65430201	8553170	3	31,76,442,	0,4593,9152,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	65420715	65436007	chr1:65420715-65436007	1	+	65421416	65431919	789624	5	25,132,76,187,4205,	0,612,4587,9146,11087,
#Partially deleted in new
chr1	65486405	65494188	chr1:65486405-65494188	3	+	65486405	65486405	8553170	2	101,322,	0,7461,
#Partially deleted in new
chr1	65525688	65626234	chr1:65525688-65626234	1	+	65565565	65626170	0	19	130,60,330,124,209,146,145,291,118,200,149,160,83,217,183,96,106,76,112,	0,39857,44784,46637,66968,70759,72971,75703,76154,79349,83064,84258,84525,90319,92275,94239,95664,97217,100434,
#Partially deleted in new
chr1	65525688	65610268	chr1:65525688-65610268	0	+	65525688	65525688	8553170	13	130,60,330,124,209,146,145,291,118,200,149,160,55,	0,39857,44784,46637,66968,70759,72971,75703,76154,79349,83064,84258,84525,
#Partially deleted in new
chr1	65525688	65635409	chr1:65525688-65635409	1	+	65565565	65633169	0	19	130,60,330,124,209,146,145,291,118,200,149,160,83,217,183,96,106,76,2258,	0,39857,44784,46637,66968,70759,72971,75703,76154,79349,83064,84258,84525,90319,92275,94239,95664,97217,107463,
#Partially deleted in new
chr1	65565545	65626234	chr1:65565545-65626234	1	+	65565565	65626170	0	18	60,330,124,209,146,145,291,118,200,149,160,83,217,183,96,106,76,112,	0,4927,6780,27111,30902,33114,35846,36297,39492,43207,44401,44668,50462,52418,54382,55807,57360,60577,
#Partially deleted in new
chr1	65576128	65578380	chr1:65576128-65578380	7	-	65576128	65576128	16724991	2	1681,116,	0,2136,
#Partially deleted in new
chr1	65619939	65623384	chr1:65619939-65623384	0	+	65619939	65619939	8553170	3	84,106,479,	0,1413,2966,
#Partially deleted in new
chr1	65703961	65714847	chr1:65703961-65714847	3	+	65703961	65703961	8553170	3	345,159,1812,	0,6851,9074,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	65761057	65761352	chr1:65761057-65761352	3	-	65761057	65761057	8553170	1	295,	0,
#Partially deleted in new
chr1	65792513	66374278	chr1:65792513-66374278	3	+	65913314	66372678	0	17	117,112,239,195,37,71,50,113,94,179,99,165,100,155,123,183,1966,	0,120731,126083,454946,465133,465279,473524,539994,563013,569101,570654,570893,573153,575182,575429,576273,579799,
#Partially deleted in new
chr1	65793180	66373504	chr1:65793180-66373504	0	+	65913314	66372678	0	17	68,112,239,195,37,71,50,113,94,179,99,165,100,155,123,183,1192,	0,120064,125416,454279,464466,464612,472857,539327,562346,568434,569987,570226,572486,574515,574762,575606,579132,
#Partially deleted in new
chr1	65992421	66374573	chr1:65992421-66374573	1	+	65992906	66372678	0	15	721,195,37,71,50,113,94,179,99,165,100,155,123,183,2261,	0,255038,265225,265371,273616,340086,363105,369193,370746,370985,373245,375274,375521,376365,379891,
#Partially deleted in new
chr1	65992615	66112798	chr1:65992615-66112798	0	+	65992615	65992615	8553170	2	527,29,	0,120154,
#Partially deleted in new
chr1	65992734	66247557	chr1:65992734-66247557	0	+	65992734	65992734	8553170	3	408,64,98,	0,70159,254725,
#Partially deleted in new
chr1	65992735	66247544	chr1:65992735-66247544	0	+	65992735	65992735	8553170	3	407,66,85,	0,56089,254724,
#Partially deleted in new
chr1	66042499	66050718	chr1:66042499-66050718	3	-	66042499	66042499	789624	3	232,36,188,	0,3726,8031,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	66094460	66094546	chr1:66094460-66094546	3	-	66094460	66094460	8553170	1	86,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	66152389	66332590	chr1:66152389-66332590	0	+	66152527	66332590	789624	6	143,195,37,71,50,83,	0,95070,105257,105403,113648,180118,
#Partially deleted in new
chr1	66257364	66267509	chr1:66257364-66267509	0	+	66257364	66257364	8553170	5	140,37,71,50,838,	0,282,428,8673,9307,
#Partially deleted in new
chr1	66257424	66267139	chr1:66257424-66267139	0	+	66257424	66257424	8553170	5	102,37,71,50,468,	0,222,368,8613,9247,
#Partially deleted in new
chr1	66257646	66266155	chr1:66257646-66266155	0	+	66257646	66266128	789624	3	37,71,118,	0,146,8391,
#Partially deleted in new
chr1	66330727	66363215	chr1:66330727-66363215	0	+	66332530	66363215	789624	5	112,113,94,179,48,	0,1780,24799,30887,32440,
#Partially deleted in new
chr1	66332003	66374579	chr1:66332003-66374579	1	+	66332389	66372678	0	10	617,94,179,99,165,100,155,123,183,2267,	0,23523,29611,31164,31403,33663,35692,35939,36783,40309,
#Partially deleted in new
chr1	66332148	66363234	chr1:66332148-66363234	0	+	66332530	66363234	789624	5	111,110,94,179,67,	0,362,23378,29466,31019,
#Partially deleted in new
chr1	66332188	66363260	chr1:66332188-66363260	0	+	66332530	66363260	789624	5	71,113,94,179,93,	0,319,23338,29426,30979,
#Partially deleted in new
chr1	66354381	66372738	chr1:66354381-66372738	1	+	66354846	66372678	0	10	513,94,179,99,165,100,155,123,183,426,	0,1145,7233,8786,9025,11285,13314,13561,14405,17931,
#Partially deleted in new
chr1	66355124	66363498	chr1:66355124-66363498	0	+	66355124	66355124	8553170	4	496,179,99,92,	0,6490,8043,8282,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	66360425	66363242	chr1:66360425-66363242	0	+	66360425	66360425	8553170	3	361,179,75,	0,1189,2742,
#Partially deleted in new
chr1	66367493	66368157	chr1:66367493-66368157	0	+	66367493	66367493	8553170	2	357,215,	0,449,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr1	66533382	66744374	chr1:66533382-66744374	1	+	66534358	66743095	0	27	25,123,64,25,84,57,55,176,12,12,25,52,86,93,75,501,81,128,127,60,112,156,133,203,65,165,1302,	0,863,92464,99687,100697,106394,109427,110161,127130,134147,137612,138561,139898,143621,146295,148486,150724,155765,156807,162051,185911,195881,200365,205952,207275,207889,209690,
#Partially deleted in new
chr1	66533591	66745085	chr1:66533591-66745085	1	+	66534358	66743095	0	22	81,123,64,25,57,55,176,25,52,86,93,75,128,127,66,112,156,133,203,65,165,2013,	0,654,92255,99478,106185,109218,109952,137403,138352,139689,143412,146086,155556,156598,160847,185702,195672,200156,205743,207066,207680,209481,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	66533604	66626043	chr1:66533604-66626043	0	+	66533604	66533604	8553170	4	68,123,137,197,	0,641,56865,92242,
#Partially deleted in new
chr1	66533614	66679742	chr1:66533614-66679742	0	+	66534358	66679742	789624	13	58,123,64,25,72,57,55,176,25,52,86,93,65,	0,631,92232,99455,102329,106162,109195,109929,137380,138329,139666,143389,146063,
#Partially deleted in new
chr1	66534155	66677096	chr1:66534155-66677096	0	+	66534155	66534155	8553170	10	213,64,25,57,55,176,25,52,86,93,	0,91691,98914,105621,108654,109388,136839,137788,139125,142848,
#Partially deleted in new
chr1	66534180	66626060	chr1:66534180-66626060	0	+	66534180	66534180	8553170	2	188,214,	0,91666,
#Partially deleted in new
chr1	66534281	66748299	chr1:66534281-66748299	3	+	66534358	66743095	0	25	87,64,25,72,57,55,176,12,12,25,52,86,93,75,501,128,127,60,112,156,133,203,65,165,5227,	0,91565,98788,101662,105495,108528,109262,126231,133248,136713,137662,138999,142722,145396,147587,154866,155908,161152,185012,194982,199466,205053,206376,206990,208791,
#Partially deleted in new
chr1	66615938	66626105	chr1:66615938-66626105	0	+	66615938	66615938	8553170	2	181,259,	0,9908,
#Partially deleted in new
chr1	66625847	66644012	chr1:66625847-66644012	0	+	66625847	66625847	8553170	6	63,25,72,57,55,469,	0,7222,10096,13929,16962,17696,
#Deleted in new
chr1	66628439	66628517	chr1:66628439-66628517	3	+	66628439	66628439	5263520	1	78,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	66665863	66677027	chr1:66665863-66677027	3	-	66665863	66665863	8553170	2	1104,52,	0,11112,
#Partially deleted in new
chr1	66670994	66690531	chr1:66670994-66690531	0	+	66670994	66670994	8553170	7	25,52,86,93,75,128,342,	0,949,2286,6009,8683,18153,19195,
#Partially deleted in new
chr1	66682293	66690531	chr1:66682293-66690531	0	+	66682293	66682293	8553170	3	76,128,342,	0,6854,7896,
#Partially deleted in new
chr1	66694693	66745084	chr1:66694693-66745084	1	+	66695348	66743095	789624	8	800,112,156,133,203,65,165,2012,	0,24600,34570,39054,44641,45964,46578,48379,
#Partially deleted in new
chr1	66695050	66704509	chr1:66695050-66704509	0	+	66695050	66695050	8553170	2	443,237,	0,9222,
#Partially deleted in new
chr1	66695432	66704757	chr1:66695432-66704757	0	+	66695432	66695432	8553170	2	61,263,	0,9062,
#Partially deleted in new
chr1	66752458	66770896	chr1:66752458-66770896	0	+	66752458	66752458	8553170	3	126,122,510,	0,2197,17928,
#Partially deleted in new
chr1	66752459	66778787	chr1:66752459-66778787	3	+	66754658	66777454	789624	5	125,122,92,125,1537,	0,2196,17927,23819,24791,
#Partially deleted in new
chr1	66752494	66777701	chr1:66752494-66777701	0	+	66754658	66770598	789624	7	90,122,92,67,63,125,451,	0,2161,17892,18084,23019,23784,24756,
#Partially deleted in new
chr1	66752531	66770507	chr1:66752531-66770507	0	+	66752531	66752531	8553170	5	53,122,94,102,121,	0,2124,3148,16127,17855,
#Deleted in new
chr1	66775045	66775578	chr1:66775045-66775578	0	+	66775045	66775045	8553170	2	295,65,	0,468,
#Deleted in new
chr1	66776154	66777820	chr1:66776154-66777820	0	+	66776154	66776154	8553170	2	249,570,	0,1096,
#Partially deleted in new
chr1	66797740	66801256	chr1:66797740-66801256	3	-	66798012	66801221	0	2	505,210,	0,3306,
#Partially deleted in new
chr1	66812884	66924887	chr1:66812884-66924887	3	-	66814129	66924831	789624	17	1296,157,227,99,122,158,152,87,203,195,156,140,157,113,185,175,226,	0,9476,13935,14927,20700,21106,22741,24825,27584,34599,49262,58485,61896,78269,80344,92316,111777,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	66812890	66905303	chr1:66812890-66905303	0	-	66891076	66905303	789624	14	1290,157,227,99,122,158,87,203,195,156,140,1084,185,103,	0,9470,13929,14921,20694,21100,24819,27578,34593,49256,58479,77292,80338,92310,
#Partially deleted in new
chr1	66813969	66874878	chr1:66813969-66874878	0	-	66814129	66874878	789624	12	211,157,227,122,158,152,87,203,195,156,140,98,	0,8391,12850,19615,20021,21656,23740,26499,33514,48177,57400,60811,
#Deleted in new
chr1	66826941	66828558	chr1:66826941-66828558	3	+	66826941	66826941	8553170	2	130,731,	0,886,
#Partially deleted in new
chr1	66837602	66924840	chr1:66837602-66924840	1	-	66837652	66924831	789624	10	194,203,195,156,140,157,113,185,175,179,	0,2866,9881,24544,33767,37178,53551,55626,67598,87059,
#Partially deleted in new
chr1	66837606	66862303	chr1:66837606-66862303	0	-	66837652	66862303	789624	3	190,203,157,	0,2862,24540,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	66847923	66871509	chr1:66847923-66871509	0	-	66848240	66871509	789624	3	388,156,140,	0,14223,23446,
#Partially deleted in new
chr1	66860712	66862304	chr1:66860712-66862304	0	-	66860712	66860712	8553170	2	127,158,	0,1434,
#Partially deleted in new
chr1	66862272	66924819	chr1:66862272-66924819	0	-	66893330	66924819	789624	5	30,140,113,133,158,	0,9097,28881,30956,62389,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	66870804	66924846	chr1:66870804-66924846	1	-	66871346	66924831	789624	6	705,157,113,185,175,185,	0,3976,20349,22424,34396,53857,
#Partially deleted in new
chr1	66904858	66907016	chr1:66904858-66907016	1	-	66905179	66905329	789624	2	517,96,	0,2062,
#Partially deleted in new
chr1	66921242	66924696	chr1:66921242-66924696	0	-	66921242	66921242	8553170	2	159,35,	0,3419,
#Partially deleted in new
chr1	66924894	66988619	chr1:66924894-66988619	1	+	66958067	66986473	789624	14	201,101,25,162,133,65,73,152,82,95,128,140,21,2217,	0,1247,15133,33164,33956,34784,38193,45913,46760,48002,51700,56884,59677,61508,
#Partially deleted in new
chr1	66924894	66988619	chr1:66924894-66988619	1	+	66928903	66986473	789624	16	201,101,74,25,146,162,133,65,73,152,82,95,128,140,81,2217,	0,1247,3995,15133,21255,33164,33956,34784,38193,45913,46760,48002,51700,56884,59677,61508,
#Partially deleted in new
chr1	66924956	66988031	chr1:66924956-66988031	1	+	66928903	66984900	789624	15	139,101,77,25,146,162,133,65,73,152,82,95,128,140,3460,	0,1185,3930,15071,21193,33102,33894,34722,38131,45851,46698,47940,51638,56822,59615,
#Partially deleted in new
chr1	66924958	66986670	chr1:66924958-66986670	1	+	66925028	66986473	789624	15	137,101,25,146,162,133,65,73,152,82,95,128,140,21,268,	0,1183,15069,21191,33100,33892,34720,38129,45849,46696,47938,51636,56820,59613,61444,
#Partially deleted in new
chr1	66924958	66986670	chr1:66924958-66986670	1	+	66928903	66986473	789624	16	137,101,74,25,146,162,133,65,73,152,82,95,128,140,21,268,	0,1183,3931,15069,21191,33100,33892,34720,38129,45849,46696,47938,51636,56820,59613,61444,
#Partially deleted in new
chr1	66924958	66985684	chr1:66924958-66985684	1	+	66925028	66984900	789624	14	137,101,25,146,162,133,65,73,152,82,95,128,140,1113,	0,1183,15069,21191,33100,33892,34720,38129,45849,46696,47938,51636,56820,59613,
#Partially deleted in new
chr1	66924966	66948240	chr1:66924966-66948240	1	+	66928903	66946310	789624	5	129,101,74,25,2091,	0,1175,3923,15061,21183,
#Partially deleted in new
chr1	66930242	66988030	chr1:66930242-66988030	3	+	66930391	66984900	789624	13	158,25,146,162,133,65,73,152,82,95,128,140,3459,	0,9785,15907,27816,28608,29436,32845,40565,41412,42654,46352,51536,54329,
#Partially deleted in new
chr1	66930242	66986670	chr1:66930242-66986670	1	+	66930391	66986473	789624	14	158,25,146,162,133,65,73,152,82,95,128,140,21,268,	0,9785,15907,27816,28608,29436,32845,40565,41412,42654,46352,51536,54329,56160,
#Partially deleted in new
chr1	66932651	66959750	chr1:66932651-66959750	0	+	66932651	66932651	8553170	7	170,25,37,146,162,133,72,	0,7376,7534,13498,25407,26199,27027,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	66958910	66960078	chr1:66958910-66960078	0	+	66958910	66958910	8553170	2	73,400,	0,768,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	66999331	67054099	chr1:66999331-67054099	3	-	67004339	67054013	789624	12	5117,83,79,68,93,103,69,72,68,87,34,289,	0,9753,21037,22203,42904,47933,50450,51101,52680,53439,53624,54479,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	67092164	67231852	chr1:67092164-67231852	3	-	67093004	67127240	789624	8	1440,187,70,113,158,92,86,7,	0,3070,4087,23187,33587,35001,38977,139681,
#Partially deleted in new
chr1	67092175	67127261	chr1:67092175-67127261	1	-	67093004	67127240	789624	6	1429,187,70,113,158,96,	0,3059,4076,23176,33576,34990,
#Partially deleted in new
chr1	67092175	67127261	chr1:67092175-67127261	1	-	67093579	67127240	789624	7	1429,70,145,68,113,158,96,	0,4076,11062,19401,23176,33576,34990,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	67092394	67134970	chr1:67092394-67134970	0	-	67092394	67092394	8553170	5	3927,158,92,86,41,	0,33357,34771,38747,42535,
#Partially deleted in new
chr1	67092396	67127261	chr1:67092396-67127261	1	-	67096311	67127240	789624	3	3925,158,96,	0,33355,34769,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	67092947	67134977	chr1:67092947-67134977	0	-	67113745	67127240	789624	10	657,70,145,68,143,113,158,92,86,48,	0,3304,10290,18629,20666,22404,32804,34218,38194,41982,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	67093558	67231853	chr1:67093558-67231853	0	-	67093558	67127240	789624	10	46,187,70,145,68,113,158,92,86,8,	0,1676,2693,9679,18018,21793,32193,33607,37583,138287,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	67096295	67134977	chr1:67096295-67134977	0	-	67096295	67127240	789624	8	26,145,68,113,158,92,86,48,	0,6942,15281,19056,29456,30870,34846,38634,
#Deleted in new
chr1	67102644	67102779	chr1:67102644-67102779	3	-	67102644	67102644	8553170	1	135,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	67121604	67123956	chr1:67121604-67123956	3	-	67121604	67121604	8553170	1	2352,	0,
#Partially deleted in new
chr1	67138906	67259167	chr1:67138906-67259167	1	+	67200854	67259128	789624	11	255,99,297,124,156,146,157,90,103,91,690,	0,29185,30435,43929,61835,68003,80667,97806,101272,116930,119571,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	67166399	67259979	chr1:67166399-67259979	3	+	67168120	67259128	0	11	142,99,297,124,161,146,157,90,103,91,1502,	0,1692,2942,16436,34337,40510,53174,70313,73779,89437,92078,
#Partially deleted in new
chr1	67196139	67196243	chr1:67196139-67196243	3	+	67196139	67196139	8553170	1	104,	0,
#Partially deleted in new
chr1	67219556	67259671	chr1:67219556-67259671	1	+	67255894	67259128	0	3	174,91,1194,	0,36280,38921,
#Deleted in new
chr1	67267600	67267726	chr1:67267600-67267726	3	-	67267600	67267600	8553170	1	126,	0,
#Partially deleted in new
chr1	67278051	67278779	chr1:67278051-67278779	7	+	67278051	67278051	16724991	1	728,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	67307363	67396900	chr1:67307363-67396900	3	+	67320368	67396089	789624	16	604,112,288,115,185,143,151,80,220,201,99,159,138,91,100,1354,	0,12969,14238,19371,20836,22223,23296,31260,43506,60461,65072,65261,72622,79215,82665,88183,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	67307363	67396900	chr1:67307363-67396900	1	+	67320368	67395599	789624	14	604,112,288,115,185,143,151,80,220,201,99,159,138,1354,	0,12969,14238,19371,20836,22223,23296,31260,43506,60461,65072,65261,72622,88183,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	67307363	67396900	chr1:67307363-67396900	1	+	67320368	67396089	789624	14	604,112,288,115,185,143,151,80,220,201,138,91,100,1354,	0,12969,14238,19371,20836,22223,23296,31260,43506,60461,72622,79215,82665,88183,
#Partially deleted in new
chr1	67307872	67395835	chr1:67307872-67395835	1	+	67320368	67395580	789624	16	95,88,112,288,115,185,143,151,80,220,201,99,159,138,91,289,	0,6040,12460,13729,18862,20327,21714,22787,30751,42997,59952,64563,64752,72113,78706,87674,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	67307904	67397090	chr1:67307904-67397090	1	+	67320368	67396089	8553170	17	63,88,108,288,115,185,143,151,80,220,201,99,159,138,91,100,1544,	0,6008,12432,13697,18830,20295,21682,22755,30719,42965,59920,64531,64720,72081,78674,82124,87642,
#Partially deleted in new
chr1	67326768	67338750	chr1:67326768-67338750	0	+	67326768	67338750	789624	5	81,185,143,151,127,	0,1431,2818,3891,11855,
#Partially deleted in new
chr1	67379927	67395763	chr1:67379927-67395763	0	+	67379927	67379927	8553170	4	196,91,100,217,	0,6651,10101,15619,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	67407809	67430415	chr1:67407809-67430415	3	-	67413206	67430300	0	8	5454,174,178,78,72,141,151,428,	0,7356,12199,16390,17078,17273,18325,22178,
#Partially deleted in new
chr1	67411037	67430386	chr1:67411037-67430386	1	-	67413206	67430300	0	8	2226,174,178,123,90,141,151,399,	0,4128,8971,13162,13850,14045,15097,18950,
#Partially deleted in new
chr1	67412384	67430399	chr1:67412384-67430399	1	-	67413206	67430300	0	8	879,174,178,78,90,141,151,412,	0,2781,7624,11815,12503,12698,13750,17603,
#Partially deleted in new
chr1	67412866	67430372	chr1:67412866-67430372	1	-	67413206	67430300	0	8	397,174,178,123,72,141,151,385,	0,2299,7142,11333,12021,12216,13268,17121,
#Partially deleted in new
chr1	67413215	67424414	chr1:67413215-67424414	0	-	67413215	67413215	8553170	4	48,174,178,215,	0,1950,6793,10984,
#Partially deleted in new
chr1	67415272	67420565	chr1:67415272-67420565	0	-	67415272	67415272	8553170	2	67,557,	0,4736,
#Deleted in new
chr1	67417213	67417318	chr1:67417213-67417318	3	+	67417213	67417213	8553170	1	105,	0,
#Partially deleted in new
chr1	67419764	67425120	chr1:67419764-67425120	0	-	67419764	67419764	8553170	4	422,78,90,38,	0,4435,5123,5318,
#Partially deleted in new
chr1	67424284	67429657	chr1:67424284-67429657	0	-	67424284	67424284	8553170	5	38,72,141,151,222,	0,603,798,1850,5151,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	67522346	67532612	chr1:67522346-67532612	3	+	67522346	67522346	8553170	4	52,122,64,507,	0,7281,7968,9759,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	67522353	67532326	chr1:67522353-67532326	1	+	67522353	67522353	8553170	5	45,60,97,64,221,	0,5024,7299,7961,9752,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	67522353	67532326	chr1:67522353-67532326	0	+	67522353	67522353	8553170	4	45,60,97,221,	0,5024,7299,9752,
#Deleted in new
chr1	67561072	67561446	chr1:67561072-67561446	7	+	67561072	67561072	16724991	1	374,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	67656830	67657129	chr1:67656830-67657129	3	-	67656830	67656830	8553170	1	299,	0,
#Deleted in new
chr1	67660154	67661013	chr1:67660154-67661013	7	-	67660154	67660154	16724991	1	859,	0,
#Deleted in new
chr1	67685060	67688338	chr1:67685060-67688338	3	+	67685494	67687774	0	4	478,102,238,678,	0,964,1289,2600,
#Deleted in new
chr1	67685200	67687986	chr1:67685200-67687986	1	+	67685494	67687774	0	3	338,238,326,	0,1149,2460,
#Deleted in new
chr1	67685213	67687986	chr1:67685213-67687986	1	+	67685494	67687697	8553170	2	325,326,	0,2447,
#Deleted in new
chr1	67685213	67687986	chr1:67685213-67687986	1	+	67685494	67687697	789624	3	325,102,326,	0,811,2447,
#Deleted in new
chr1	67685228	67686588	chr1:67685228-67686588	0	+	67685228	67685228	8553170	2	310,564,	0,796,
#Deleted in new
chr1	67685404	67688333	chr1:67685404-67688333	1	+	67685494	67687774	789624	4	134,102,184,673,	0,620,999,2256,
#Deleted in new
chr1	67685675	67686586	chr1:67685675-67686586	0	+	67685675	67685675	8553170	2	451,237,	0,674,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	67701465	67833467	chr1:67701465-67833467	3	-	67705450	67707686	789624	4	4111,119,50,124,	0,6128,75992,131878,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	67772592	67772653	chr1:67772592-67772653	3	-	67772592	67772592	8553170	1	61,	0,
#Partially deleted in new
chr1	67777137	67833436	chr1:67777137-67833436	0	-	67777137	67777137	8553170	2	370,93,	0,56206,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	67832302	68202987	chr1:67832302-68202987	3	+	67832302	67832302	789624	10	134,117,74,194,64,77,282,117,154,1019,	0,202344,239497,266340,267426,268395,285148,288822,305994,369666,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	67832308	68202987	chr1:67832308-68202987	1	+	67832308	67832308	8553170	9	128,107,74,194,64,73,282,117,1019,	0,123847,239491,266334,267420,270346,285142,288816,369660,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	67955404	68026762	chr1:67955404-68026762	1	+	67955404	67955404	8553170	4	380,107,120,189,	0,751,69114,71169,
#Deleted in new
chr1	68043329	68044233	chr1:68043329-68044233	7	+	68043329	68043329	16724991	1	904,	0,
#Partially deleted in new
chr1	68045895	68051631	chr1:68045895-68051631	3	-	68046607	68047297	789624	4	1467,251,114,207,	0,4652,4988,5529,
#Partially deleted in new
chr1	68045961	68050627	chr1:68045961-68050627	1	-	68046607	68047297	789624	2	1401,80,	0,4586,
#Deleted in new
chr1	68049359	68049745	chr1:68049359-68049745	7	-	68049359	68049359	16724991	1	386,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	68098472	68232545	chr1:68098472-68232545	1	-	68098631	68232299	789624	12	281,154,84,144,64,98,169,137,162,125,267,352,	0,39307,46096,47396,49663,50090,51715,55044,56626,60650,95482,133721,
#Partially deleted in new
chr1	68125357	68232553	chr1:68125357-68232553	3	-	68126225	68232299	789624	12	978,154,84,144,64,98,169,137,162,125,273,360,	0,12422,19211,20511,22778,23205,24830,28159,29741,33765,68597,106836,
#Partially deleted in new
chr1	68125491	68232544	chr1:68125491-68232544	1	-	68126225	68232299	789624	11	844,154,84,144,64,98,169,137,162,125,351,	0,12288,19077,20377,22644,23071,24696,28025,29607,33631,106702,
#Partially deleted in new
chr1	68125973	68138162	chr1:68125973-68138162	0	-	68125973	68125973	8553170	2	362,383,	0,11806,
#Deleted in new
chr1	68138356	68141788	chr1:68138356-68141788	0	+	68138356	68138356	8553170	2	94,364,	0,3068,
#Partially deleted in new
chr1	68142603	68155184	chr1:68142603-68155184	0	-	68142603	68142603	8553170	8	259,84,144,64,98,169,137,86,	0,1965,3265,5532,5959,7584,10913,12495,
#Partially deleted in new
chr1	68148566	68176377	chr1:68148566-68176377	0	-	68148566	68148566	8553170	6	94,169,137,162,125,60,	0,1621,4950,6532,10556,27751,
#Partially deleted in new
chr1	68150267	68232280	chr1:68150267-68232280	0	-	68150267	68232280	789624	5	89,137,162,125,87,	0,3249,4831,8855,81926,
#Partially deleted in new
chr1	68153516	68233018	chr1:68153516-68233018	0	-	68153516	68194198	789624	5	137,162,125,273,359,	0,1582,5606,40438,79143,
#Partially deleted in new
chr1	68153516	68231687	chr1:68153516-68231687	0	-	68153516	68159227	789624	4	137,162,125,100,	0,1582,5606,78071,
#Partially deleted in new
chr1	68153553	68232523	chr1:68153553-68232523	0	-	68153553	68159227	789624	5	100,162,125,34,151,	0,1545,5569,40401,78819,
#Partially deleted in new
chr1	68155171	68233120	chr1:68155171-68233120	0	-	68155171	68194198	789624	4	89,125,273,68,	0,3951,38783,77881,
#Partially deleted in new
chr1	68155242	68232521	chr1:68155242-68232521	0	-	68228244	68232299	789624	5	18,125,273,35,328,	0,3880,38712,72978,76951,
#Partially deleted in new
chr1	68159183	68231825	chr1:68159183-68231825	0	-	68186587	68231825	789624	4	64,110,273,123,	0,27356,34771,72519,
#Deleted in new
chr1	68161760	68163090	chr1:68161760-68163090	7	-	68161760	68161760	16724991	1	1330,	0,
#Deleted in new
chr1	68183517	68183610	chr1:68183517-68183610	3	-	68183517	68183517	5263520	1	93,	0,
#Partially deleted in new
chr1	68193857	68232523	chr1:68193857-68232523	1	-	68193949	68232299	789624	2	370,330,	0,38336,
#Deleted in new
chr1	68242473	68243055	chr1:68242473-68243055	7	-	68242473	68242473	16724991	1	582,	0,
#Deleted in new
chr1	68282387	68282622	chr1:68282387-68282622	7	+	68282387	68282387	16724991	1	235,	0,
#Deleted in new
chr1	68375326	68375663	chr1:68375326-68375663	7	-	68375326	68375326	16724991	1	337,	0,
#Partially deleted in new
chr1	68381440	68381657	chr1:68381440-68381657	7	-	68381440	68381440	16724991	1	217,	0,
#Partially deleted in new
chr1	68428821	68449959	chr1:68428821-68449959	3	-	68429775	68449905	789624	14	1106,112,95,115,130,140,133,82,148,142,108,151,83,65,	0,2243,2460,2649,9365,10120,10369,10739,12031,15709,15954,17888,19802,21073,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	68474151	68497221	chr1:68474151-68497221	3	-	68476931	68496999	0	11	2918,186,177,173,141,48,131,119,157,266,270,	0,3635,4992,7288,9798,12785,14222,14764,15300,20278,22800,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	68474151	68497114	chr1:68474151-68497114	1	-	68476931	68496999	0	12	2918,186,177,173,852,141,48,131,119,157,266,163,	0,3635,4992,7288,7894,9798,12785,14222,14764,15300,20278,22800,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	68475573	68482238	chr1:68475573-68482238	0	-	68475573	68475573	8553170	4	1496,186,177,799,	0,2213,3570,5866,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	68476896	68494531	chr1:68476896-68494531	0	-	68481591	68494531	789624	13	173,186,177,173,257,33,141,48,131,119,34,39,102,	0,890,2247,4543,5744,6376,7053,10040,11477,12019,12555,12673,17533,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	68479128	68483539	chr1:68479128-68483539	3	+	68479128	68479128	8553170	2	181,779,	0,3632,
#Partially deleted in new
chr1	68486940	68497082	chr1:68486940-68497082	0	-	68486940	68488431	789624	5	44,131,119,157,131,	0,1433,1975,2511,10011,
#Partially deleted in new
chr1	68496675	68538627	chr1:68496675-68538627	3	+	68496675	68496675	789624	3	96,155,996,	0,32649,40956,
#Deleted in new
chr1	68514374	68514669	chr1:68514374-68514669	7	-	68514374	68514374	16724991	1	295,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	68633700	68640425	chr1:68633700-68640425	3	+	68633700	68633700	8553170	3	67,82,2487,	0,892,4238,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	68881576	68943452	chr1:68881576-68943452	1	+	68881576	68881576	8553170	2	427,872,	0,61004,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	68974009	69023558	chr1:68974009-69023558	3	+	68974009	68974009	8553170	4	76,125,83,432,	0,39493,48206,49117,
#Partially deleted in new
chr1	69055897	69185003	chr1:69055897-69185003	3	+	69055897	69055897	789624	5	150,119,48,92,218,	0,29282,32617,126872,128888,
#Partially deleted in new
chr1	69215834	69249477	chr1:69215834-69249477	3	-	69215834	69215834	8553170	4	172,201,156,263,	0,1035,2260,33380,
#Partially deleted in new
chr1	69243371	69249423	chr1:69243371-69249423	0	-	69243371	69243371	8553170	2	225,209,	0,5843,
#Partially deleted in new
chr1	69433254	69435409	chr1:69433254-69435409	3	+	69433254	69433254	789624	2	51,407,	0,1748,
#Partially deleted in new
chr1	69568397	70123488	chr1:69568397-70123488	1	+	69716217	70121887	789624	27	244,98,77,203,118,79,90,57,64,75,145,73,130,116,70,100,125,249,201,112,181,1681,120,222,93,75,1709,	0,109983,147744,191793,223645,257350,266382,269829,363109,411981,417844,426163,443399,444576,448067,450321,452607,454728,459773,467723,468046,469715,484628,507679,521329,539354,553382,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	69568449	69875004	chr1:69568449-69875004	1	+	69568639	69873473	789624	8	192,98,203,118,79,90,57,1538,	0,109931,191741,223593,257298,266330,269777,305017,
#Deleted in new
chr1	69606854	69608301	chr1:69606854-69608301	7	-	69606854	69606854	16724991	1	1447,	0,
#Partially deleted in new
chr1	69760174	70122243	chr1:69760174-70122243	3	+	69760204	70121887	789624	25	219,118,79,90,57,64,75,145,73,130,116,70,100,125,249,201,112,181,1681,141,120,222,93,75,464,	0,31868,65573,74605,78052,171332,220204,226067,234386,251622,252799,256290,258544,260830,262951,267996,275946,276269,277938,283779,292851,315902,329552,347577,361605,
#Partially deleted in new
chr1	69760186	70121994	chr1:69760186-70121994	1	+	70021103	70121887	789624	21	207,118,79,90,57,64,75,145,73,130,116,70,100,125,1681,141,120,222,93,75,215,	0,31856,65561,74593,78040,171320,220192,226055,234374,251610,252787,256278,258532,260818,277926,283767,292839,315890,329540,347565,361593,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	69879591	69879895	chr1:69879591-69879895	3	+	69879591	69879591	8553170	1	304,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	69919321	69920317	chr1:69919321-69920317	7	+	69919321	69919321	16724991	1	996,	0,
#Deleted in new
chr1	69919356	69919657	chr1:69919356-69919657	5	+	69919356	69919356	16724991	1	301,	0,
#Partially deleted in new
chr1	70013981	70031222	chr1:70013981-70031222	3	-	70013981	70013981	8553170	4	163,132,137,91,	0,7266,8280,17150,
#Deleted in new
chr1	70020822	70022398	chr1:70020822-70022398	1	-	70020822	70020822	8553170	2	557,137,	0,1439,
#Partially deleted in new
chr1	70107749	70148005	chr1:70107749-70148005	0	+	70107749	70128554	789624	6	77,91,258,175,57,117,	0,14030,20788,30360,34447,40139,
#Partially deleted in new
chr1	70121777	70142253	chr1:70121777-70142253	0	+	70121777	70128554	789624	5	93,258,129,175,57,	0,6760,8350,16332,20419,
#Partially deleted in new
chr1	70121789	70142253	chr1:70121789-70142253	0	+	70121789	70128554	789624	6	81,258,129,86,175,57,	0,6748,8338,10413,16320,20407,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	70121810	70147196	chr1:70121810-70147196	0	+	70121810	70128554	789624	6	60,258,175,72,57,170,	0,6727,16299,18732,20386,25216,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	70128596	70147196	chr1:70128596-70147196	0	+	70128596	70128596	8553170	7	199,129,86,175,72,57,170,	0,1531,3606,9513,11946,13600,18430,
#Deleted in new
chr1	70138131	70142253	chr1:70138131-70142253	0	+	70138131	70138131	8553170	3	153,266,57,	0,2217,4065,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	70138283	70148005	chr1:70138283-70148005	0	+	70138283	70138283	8553170	4	2331,57,51,117,	0,3913,8743,9605,
#Deleted in new
chr1	70141381	70144364	chr1:70141381-70144364	0	+	70141381	70141381	8553170	1	2983,	0,
#Partially deleted in new
chr1	70144804	70205620	chr1:70144804-70205620	3	-	70145799	70205540	789624	15	1101,186,78,111,108,109,46,88,173,143,124,130,74,182,231,	0,3682,6323,7628,10884,14525,28660,28817,31005,34046,36281,39980,42460,44287,60585,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	70147120	70151945	chr1:70147120-70151945	0	+	70147120	70147120	8553170	3	75,117,198,	0,768,4627,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	70180143	70180440	chr1:70180143-70180440	3	-	70180143	70180143	8553170	1	297,	0,
#Partially deleted in new
chr1	70205681	70251617	chr1:70205681-70251617	1	+	70221636	70250805	789624	13	99,225,134,110,93,50,128,82,132,90,96,139,1007,	0,15933,22740,26586,29014,29819,31743,33757,39002,41136,44270,44683,44929,
#Partially deleted in new
chr1	70205697	70228727	chr1:70205697-70228727	0	+	70205697	70205697	8553170	3	83,228,306,	0,15914,22724,
#Partially deleted in new
chr1	70205723	70253052	chr1:70205723-70253052	3	+	70221636	70250805	789624	13	57,228,134,110,93,50,128,82,132,90,96,139,2445,	0,15888,22698,26544,28972,29777,31701,33715,38960,41094,44228,44641,44884,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	70218588	70221023	chr1:70218588-70221023	3	-	70218588	70218588	8553170	2	256,201,	0,2234,
#Partially deleted in new
chr1	70221369	70235550	chr1:70221369-70235550	0	+	70221636	70231908	789624	7	31,225,134,117,110,93,50,	0,245,7052,10489,10898,13326,14131,
#Partially deleted in new
chr1	70221395	70250392	chr1:70221395-70250392	0	+	70221636	70250392	789624	11	444,134,110,93,50,128,82,132,90,117,28,	0,7026,10872,13300,14105,16029,18043,23288,25422,28535,28969,
#Partially deleted in new
chr1	70221468	70232375	chr1:70221468-70232375	0	+	70221636	70228504	789624	5	371,91,109,117,108,	0,6996,9626,10390,10799,
#Partially deleted in new
chr1	70221479	70231268	chr1:70221479-70231268	0	+	70221479	70221479	8553170	3	360,134,174,	0,6942,9615,
#Partially deleted in new
chr1	70221723	70237550	chr1:70221723-70237550	0	+	70221723	70221723	8553170	7	116,33,134,110,93,50,126,	0,1042,6698,10544,12972,13777,15701,
#Partially deleted in new
chr1	70228421	70234731	chr1:70228421-70234731	0	+	70228421	70228421	8553170	4	134,109,110,36,	0,2673,3846,6274,
#Deleted in new
chr1	70230063	70231274	chr1:70230063-70231274	0	+	70230063	70230063	8553170	2	555,180,	0,1031,
#Partially deleted in new
chr1	70230277	70251997	chr1:70230277-70251997	0	+	70230277	70230277	8553170	11	1698,110,93,50,128,82,132,90,96,139,1390,	0,1990,4418,5223,7147,9161,14406,16540,19674,20087,20330,
#Partially deleted in new
chr1	70231547	70252001	chr1:70231547-70252001	1	+	70232110	70250805	789624	10	830,93,50,128,82,132,90,96,139,1394,	0,3148,3953,5877,7891,13136,15270,18404,18817,19060,
#Partially deleted in new
chr1	70237480	70250998	chr1:70237480-70250998	0	+	70237480	70237480	8553170	8	72,82,132,90,33,96,139,391,	0,1958,7203,9337,9636,12471,12884,13127,
#Partially deleted in new
chr1	70246729	70250725	chr1:70246729-70250725	0	+	70246729	70246729	8553170	4	178,96,139,115,	0,3222,3635,3881,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	70248393	70252001	chr1:70248393-70252001	0	+	70248393	70248393	8553170	2	2110,1391,	0,2217,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	70249741	70250946	chr1:70249741-70250946	0	+	70249741	70249741	8553170	3	306,139,339,	0,623,866,
#Partially deleted in new
chr1	70260587	70354722	chr1:70260587-70354722	3	-	70262716	70354408	789624	13	2260,101,99,80,162,132,145,67,46,86,105,42,744,	0,10268,14132,16177,31800,35542,40176,45636,53157,54893,64265,75470,93391,
#Partially deleted in new
chr1	70261236	70354734	chr1:70261236-70354734	1	-	70262716	70354408	789624	12	1611,101,99,80,162,132,145,67,46,86,42,756,	0,9619,13483,15528,31151,34893,39527,44987,52508,54244,74821,92742,
#Partially deleted in new
chr1	70262273	70276843	chr1:70262273-70276843	0	-	70262273	70262273	8553170	4	530,101,99,79,	0,8582,12446,14491,
#Partially deleted in new
chr1	70292145	70313790	chr1:70292145-70313790	0	-	70292145	70292145	8553170	5	404,132,145,67,46,	0,3984,8618,14078,21599,
#Partially deleted in new
chr1	70305685	70324957	chr1:70305685-70324957	0	-	70305685	70305685	8553170	4	272,67,86,105,	0,538,9795,19167,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	70354804	70367911	chr1:70354804-70367911	3	+	70354951	70366518	789624	3	303,94,295,	0,11639,12812,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	70354811	70368023	chr1:70354811-70368023	1	+	70354951	70366531	789624	3	397,94,407,	0,11632,12805,
#Partially deleted in new
chr1	70354827	70366237	chr1:70354827-70366237	0	+	70354827	70354827	8553170	2	381,92,	0,11318,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	70354828	70368023	chr1:70354828-70368023	0	+	70354951	70366518	789624	4	279,94,52,407,	0,11615,12104,12788,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	70354835	70368021	chr1:70354835-70368021	1	+	70354951	70367728	789624	3	276,94,405,	0,11608,12781,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	70354843	70385339	chr1:70354843-70385339	1	+	70354951	70366531	789624	3	365,94,82,	0,11600,30414,
#Duplicated in new
chr1	70354854	70367723	chr1:70354854-70367723	0	+	70354951	70366214	789624	5	253,183,94,52,107,	0,11291,11589,12078,12762,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	70359561	70360437	chr1:70359561-70360437	3	-	70359561	70359561	8553170	2	434,141,	0,735,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	70411217	70439851	chr1:70411217-70439851	1	+	70411415	70439127	0	11	366,82,110,132,58,78,153,122,53,139,751,	0,4738,10348,13067,18576,19099,20865,22610,23907,27470,27883,
#Partially deleted in new
chr1	70411271	70439570	chr1:70411271-70439570	3	+	70411415	70439127	0	12	312,82,96,110,132,58,78,153,122,53,139,470,	0,4684,6665,10294,13013,18522,19045,20811,22556,23853,27416,27829,
#Partially deleted in new
chr1	70411271	70430394	chr1:70411271-70430394	0	+	70411271	70411271	8553170	6	312,82,110,132,58,78,	0,4684,10294,13013,18522,19045,
#Partially deleted in new
chr1	70411382	70439204	chr1:70411382-70439204	1	+	70411415	70439127	0	11	201,82,96,110,58,78,153,122,53,139,104,	0,4573,6554,10183,18411,18934,20700,22445,23742,27305,27718,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	70434850	70439232	chr1:70434850-70439232	0	+	70434850	70434850	8553170	3	327,139,132,	0,3837,4250,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	70445070	70445536	chr1:70445070-70445536	3	+	70445070	70445070	8553170	1	466,	0,
#Deleted in new
chr1	70530525	70531492	chr1:70530525-70531492	7	+	70530525	70530525	16724991	1	967,	0,
#Deleted in new
chr1	70660656	70661265	chr1:70660656-70661265	7	-	70660656	70660656	16724991	1	609,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	70715932	70720289	chr1:70715932-70720289	3	-	70715932	70715932	8553170	2	344,88,	0,4269,
#Partially deleted in new
chr1	70852352	71047788	chr1:70852352-71047788	1	-	70953785	71047577	789624	5	507,27,92,180,1108,	0,101410,121944,159952,194328,
#Partially deleted in new
chr1	70852352	71047808	chr1:70852352-71047808	1	-	70852795	71047577	789624	3	516,197,1128,	0,159935,194328,
#Partially deleted in new
chr1	70852352	71047808	chr1:70852352-71047808	1	-	70852838	71047577	789624	3	507,180,1128,	0,159952,194328,
#Partially deleted in new
chr1	70852441	71047788	chr1:70852441-71047788	0	-	70862368	71047577	789624	6	418,93,145,27,180,1108,	0,9863,13247,101321,159863,194239,
#Partially deleted in new
chr1	70852572	71047633	chr1:70852572-71047633	1	-	70852838	71047577	789624	4	287,27,180,953,	0,101190,159732,194108,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	70947378	70951493	chr1:70947378-70951493	3	+	70947378	70947378	8553170	3	97,59,593,	0,3356,3522,
#Partially deleted in new
chr1	70952431	71047788	chr1:70952431-71047788	3	-	70952906	71047577	789624	4	628,27,180,1108,	0,1331,59873,94249,
#Partially deleted in new
chr1	70970780	71047788	chr1:70970780-71047788	1	-	70971729	71047577	789624	4	953,92,180,1108,	0,3516,41524,75900,
#Partially deleted in new
chr1	70974292	71047808	chr1:70974292-71047808	1	-	70974292	71047577	789624	3	96,180,1128,	0,38012,72388,
#Deleted in new
chr1	71005853	71006502	chr1:71005853-71006502	3	-	71005853	71005853	8553170	1	649,	0,
#Partially deleted in new
chr1	71006630	71047808	chr1:71006630-71047808	1	-	71012214	71047577	789624	2	5854,1128,	0,40050,
#Partially deleted in new
chr1	71048854	71067184	chr1:71048854-71067184	3	+	71048854	71048854	8553170	2	134,419,	0,17911,
#Partially deleted in new
chr1	71058322	71066958	chr1:71058322-71066958	1	+	71058322	71058322	8553170	2	414,193,	0,8443,
#Partially deleted in new
chr1	71063290	71081297	chr1:71063290-71081297	3	-	71065073	71080995	0	10	1847,159,87,170,135,77,83,109,53,358,	0,3485,5985,7536,8830,9181,13504,15166,15365,17649,
#Deleted in new
chr1	71063296	71067513	chr1:71063296-71067513	0	-	71063296	71063296	8553170	2	1841,1836,	0,2381,
#Partially deleted in new
chr1	71063336	71081011	chr1:71063336-71081011	1	-	71065718	71080995	0	11	1801,75,159,87,170,135,77,83,109,53,72,	0,2341,3439,5939,7490,8784,9135,13458,15120,15319,17603,
#Partially deleted in new
chr1	71065042	71069600	chr1:71065042-71069600	0	-	71065042	71065042	8553170	3	95,159,325,	0,1733,4233,
#Deleted in new
chr1	71065053	71067086	chr1:71065053-71067086	0	-	71065053	71065053	8553170	3	84,75,311,	0,624,1722,
#Deleted in new
chr1	71065086	71067206	chr1:71065086-71067206	0	-	71065086	71065086	8553170	2	51,431,	0,1689,
#Partially deleted in new
chr1	71065718	71081289	chr1:71065718-71081289	1	-	71065718	71080995	0	10	34,159,87,170,135,77,83,109,53,350,	0,1057,3557,5108,6402,6753,11076,12738,12937,15221,
#Deleted in new
chr1	71067630	71067716	chr1:71067630-71067716	3	-	71067630	71067630	5263520	1	86,	0,
#Partially deleted in new
chr1	71081323	71237723	chr1:71081323-71237723	1	+	71081323	71081323	789624	4	90,41,58,594,	0,10340,141733,155806,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	71081323	71463501	chr1:71081323-71463501	3	+	71081323	71081323	8553170	6	90,41,58,34,157,171,	0,10340,141733,286731,320399,382007,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	71081348	71251624	chr1:71081348-71251624	0	+	71081348	71081348	8553170	5	65,41,66,58,129,	0,10315,155781,169652,170147,
#Partially deleted in new
chr1	71081349	71407684	chr1:71081349-71407684	0	+	71081349	71081349	8553170	9	64,41,58,66,57,162,157,76,64,	0,10314,141707,155780,223009,283688,320373,321146,326271,
#Partially deleted in new
chr1	71081349	71407658	chr1:71081349-71407658	0	+	71081349	71081349	8553170	12	64,41,54,32,76,109,116,66,57,157,76,38,	0,10314,112325,117517,121668,122462,126831,155780,223009,320373,321146,326271,
#Partially deleted in new
chr1	71081350	71237160	chr1:71081350-71237160	1	+	71081350	71081350	8553170	7	63,41,22,76,109,58,31,	0,10313,120684,121667,122461,141706,155779,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	71081350	71407658	chr1:71081350-71407658	0	+	71081350	71081350	8553170	9	63,41,58,66,162,34,157,76,38,	0,10313,141706,155779,283687,286704,320372,321145,326270,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	71081352	71202422	chr1:71081352-71202422	1	+	71081352	71081352	8553170	6	61,41,225,125,97,75,	0,10311,102994,117514,120682,120995,
#Partially deleted in new
chr1	71081352	71407658	chr1:71081352-71407658	0	+	71081352	71081352	8553170	6	61,41,54,125,157,38,	0,10311,112322,117514,320370,326268,
#Partially deleted in new
chr1	71081360	71268230	chr1:71081360-71268230	1	+	71081360	71081360	8553170	8	53,41,97,76,109,58,66,326,	0,10303,120674,121657,122451,141696,155769,186544,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	71081363	71407658	chr1:71081363-71407658	0	+	71081363	71081363	8553170	8	50,41,58,66,44,34,157,38,	0,10300,141693,155766,187071,286691,320359,326257,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	71081363	71407682	chr1:71081363-71407682	0	+	71081363	71081363	8553170	9	50,41,54,58,66,34,157,473,62,	0,10300,112311,141693,155766,286691,320359,320735,326257,
#Partially deleted in new
chr1	71081363	71407636	chr1:71081363-71407636	0	+	71081363	71081363	8553170	12	50,41,125,22,75,76,109,116,58,66,157,16,	0,10300,117503,120671,120984,121654,122448,126817,141693,155766,320359,326257,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	71081363	71407658	chr1:71081363-71407658	0	+	71081363	71081363	8553170	8	50,41,22,58,66,34,157,38,	0,10300,120671,141693,155766,286691,320359,326257,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	71081363	71407658	chr1:71081363-71407658	0	+	71081363	71081363	8553170	7	50,52,225,66,162,157,38,	0,10289,102983,155766,283674,320359,326257,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	71081366	71407684	chr1:71081366-71407684	0	+	71081366	71081366	8553170	6	47,41,257,34,157,64,	0,10297,155763,286688,320356,326254,
#Partially deleted in new
chr1	71081369	71407658	chr1:71081369-71407658	0	+	71081369	71081369	8553170	6	44,41,116,162,157,38,	0,10294,20779,283668,320353,326251,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	71081372	71407658	chr1:71081372-71407658	0	+	71081372	71081372	8553170	9	41,41,58,66,90,34,157,76,38,	0,10291,141684,155757,199153,286682,320350,321123,326248,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	71081393	71407658	chr1:71081393-71407658	0	+	71081393	71081393	8553170	9	20,41,225,116,58,66,157,76,38,	0,10270,102953,126787,141663,155736,320329,321102,326227,
#Partially deleted in new
chr1	71202087	71407679	chr1:71202087-71407679	0	+	71202087	71202087	8553170	8	44,75,76,109,116,66,157,59,	0,260,930,1724,6093,35042,199635,205533,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	71250998	71252119	chr1:71250998-71252119	1	+	71250998	71250998	8553170	2	60,458,	0,663,
#Deleted in new
chr1	71367053	71367303	chr1:71367053-71367303	7	-	71367053	71367053	16724991	1	250,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	71395939	72282734	chr1:71395939-72282734	3	-	71407445	72282494	789624	7	11631,152,121,132,126,233,416,	0,196877,215086,302068,380232,539139,886379,
#Deleted in new
chr1	71401721	71407658	chr1:71401721-71407658	0	+	71401721	71401721	8553170	3	158,473,38,	0,377,5899,
#Deleted in new
chr1	71401846	71407724	chr1:71401846-71407724	1	+	71401846	71401846	8553170	3	33,76,104,	0,649,5774,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	71402943	72100930	chr1:71402943-72100930	1	-	71407445	71935103	789624	7	4627,152,121,132,126,233,186,	0,189873,208082,295064,373228,532135,697801,
#Partially deleted in new
chr1	71407491	71439838	chr1:71407491-71439838	0	-	71407491	71407491	8553170	2	79,113,	0,32234,
#Partially deleted in new
chr1	71407632	71422975	chr1:71407632-71422975	0	+	71407632	71407632	8553170	4	239,74,103,472,	0,1305,13737,14871,
#Partially deleted in new
chr1	71407632	71468510	chr1:71407632-71468510	0	+	71407632	71407632	8553170	3	239,195,227,	0,55698,60651,
#Partially deleted in new
chr1	71407639	71463380	chr1:71407639-71463380	0	+	71407639	71407639	8553170	4	232,74,257,50,	0,1298,53921,55691,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	71407643	71489976	chr1:71407643-71489976	0	+	71407643	71407643	8553170	5	172,74,116,158,269,	0,1294,78754,80347,82064,
#Partially deleted in new
chr1	71407643	71422975	chr1:71407643-71422975	0	+	71407643	71407643	8553170	4	172,74,103,472,	0,1294,13726,14860,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	71408703	71489976	chr1:71408703-71489976	1	+	71408703	71408703	8553170	8	308,195,60,77,51,116,57,269,	0,54627,63878,68673,76082,77694,79287,81004,
#Partially deleted in new
chr1	71408938	71486447	chr1:71408938-71486447	1	+	71408938	71408938	8553170	6	73,257,195,60,51,50,	0,52622,54392,63643,75847,77459,
#Deleted in new
chr1	71461558	71468843	chr1:71461558-71468843	1	+	71461558	71461558	8553170	3	259,195,560,	0,1772,6725,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	71463408	71489903	chr1:71463408-71489903	1	+	71463408	71463408	8553170	6	117,60,51,137,158,196,	0,9173,21377,22989,24582,26299,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	71463448	71489919	chr1:71463448-71489919	1	+	71463448	71463448	8553170	6	77,60,107,116,57,212,	0,9133,13412,22949,24542,26259,
#Partially deleted in new
chr1	71484785	71487068	chr1:71484785-71487068	1	+	71484785	71484785	8553170	2	51,671,	0,1612,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	71570955	71573558	chr1:71570955-71573558	3	+	71570955	71570955	8553170	2	45,125,	0,2478,
#Partially deleted in new
chr1	71697935	71703405	chr1:71697935-71703405	0	-	71697935	71697935	8553170	2	204,224,	0,5246,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	71697945	72100917	chr1:71697945-72100917	0	-	71697945	71697945	8553170	4	194,126,233,173,	0,78226,237133,402799,
#Deleted in new
chr1	71738172	71738354	chr1:71738172-71738354	7	+	71738172	71738172	16724991	1	182,	0,
#Partially deleted in new
chr1	71794231	71837012	chr1:71794231-71837012	3	-	71794231	71794231	789624	3	305,196,33,	0,3843,42748,
#Deleted in new
chr1	72274551	72275159	chr1:72274551-72275159	7	+	72274551	72274551	16724991	1	608,	0,
#Deleted in new
chr1	72301471	72301829	chr1:72301471-72301829	7	+	72301471	72301471	16724991	1	358,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	72717662	72717769	chr1:72717662-72717769	3	-	72717662	72717662	8553170	1	107,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	72765030	72791282	chr1:72765030-72791282	3	+	72765030	72765030	8553170	7	50,273,85,187,214,355,218,	0,10241,13242,15076,18639,21596,26034,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	72793103	72854475	chr1:72793103-72854475	3	+	72793103	72793103	8553170	8	118,106,135,119,89,76,101,321,	0,1589,54490,55217,56248,56659,57598,61051,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	72979013	72979314	chr1:72979013-72979314	3	-	72979013	72979013	8553170	1	301,	0,
#Partially deleted in new
chr1	73104791	73106282	chr1:73104791-73106282	7	+	73104791	73104791	16724991	1	1491,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	73191603	73191855	chr1:73191603-73191855	3	-	73191603	73191603	8553170	1	252,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	73306169	73338877	chr1:73306169-73338877	3	+	73306169	73306169	789624	4	105,196,138,3432,	0,998,4683,29276,
#Partially deleted in new
chr1	73306178	73355253	chr1:73306178-73355253	0	+	73306178	73306178	8553170	3	96,217,181,	0,989,48894,
#Partially deleted in new
chr1	73306238	73307572	chr1:73306238-73307572	0	+	73306238	73306238	789624	2	36,405,	0,929,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	73635215	73709581	chr1:73635215-73709581	3	+	73635215	73635215	8553170	3	26,93,438,	0,64535,73928,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	73709367	73715214	chr1:73709367-73715214	1	+	73709367	73709367	8553170	2	58,262,	0,5585,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	73749516	73749623	chr1:73749516-73749623	7	-	73749516	73749516	16724991	1	107,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	73787369	73915315	chr1:73787369-73915315	3	-	73787369	73787369	8553170	4	1269,132,84,187,	0,2470,118559,127759,
#Deleted in new
chr1	73883713	73883822	chr1:73883713-73883822	3	+	73883713	73883713	8553170	1	109,	0,
#Partially deleted in new
chr1	74026014	74183684	chr1:74026014-74183684	1	-	74026812	74183684	789624	7	955,721,130,160,134,324,249,	0,15198,48646,83379,129718,156523,157421,
#Partially deleted in new
chr1	74026014	74074790	chr1:74026014-74074790	0	-	74026916	74074790	789624	2	955,130,	0,48646,
#Partially deleted in new
chr1	74026030	74198187	chr1:74026030-74198187	3	-	74026812	74183684	789624	8	939,721,130,160,134,324,249,192,	0,15182,48630,83363,129702,156507,157405,171965,
#Partially deleted in new
chr1	74026240	74198187	chr1:74026240-74198187	0	-	74084183	74183684	789624	10	729,243,130,64,2299,160,134,324,249,192,	0,15450,48420,52414,55677,83153,129492,156297,157195,171755,
#Partially deleted in new
chr1	74083792	74155849	chr1:74083792-74155849	0	-	74083792	74083792	8553170	4	424,94,160,117,	0,11237,25601,71940,
#Partially deleted in new
chr1	74084126	74198155	chr1:74084126-74198155	1	-	74084183	74183684	789624	5	90,160,134,249,160,	0,25267,71606,99309,113869,
#Partially deleted in new
chr1	74144383	74183511	chr1:74144383-74183511	0	-	74144439	74183511	789624	3	162,134,76,	0,11349,39052,
#Partially deleted in new
chr1	74155662	74182622	chr1:74155662-74182622	0	-	74155662	74155662	8553170	2	204,85,	0,26875,
#Partially deleted in new
chr1	74179906	74198147	chr1:74179906-74198147	1	-	74180745	74183684	789624	4	866,324,249,152,	0,2631,3529,18089,
#Partially deleted in new
chr1	74180222	74198147	chr1:74180222-74198147	0	-	74180222	74180222	8553170	2	3462,152,	0,17773,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	74198211	74207234	chr1:74198211-74207234	3	+	74198239	74205832	789624	4	149,168,93,2844,	0,1452,3106,6179,
#Partially deleted in new
chr1	74198234	74543982	chr1:74198234-74543982	3	+	74198239	74543982	789624	27	126,168,93,109,86,98,111,99,139,145,105,95,150,87,57,93,58,195,105,53,53,133,110,60,170,80,77,	0,1429,3083,37867,51224,52437,73363,133215,137776,144607,144840,155031,155745,169021,169673,170787,170972,171156,172053,237845,238239,241255,265206,290954,293862,341999,345671,
#Partially deleted in new
chr1	74198237	74204593	chr1:74198237-74204593	1	+	74198239	74201401	789624	4	123,182,93,203,	0,1426,3080,6153,
#Partially deleted in new
chr1	74198239	74234086	chr1:74198239-74234086	0	+	74198239	74198239	8553170	5	121,168,93,66,719,	0,1424,3078,6151,35128,
#Partially deleted in new
chr1	74198240	74206206	chr1:74198240-74206206	1	+	74198278	74205374	789624	4	120,168,93,999,	0,1423,3077,6967,
#Partially deleted in new
chr1	74198241	74464925	chr1:74198241-74464925	1	+	74198278	74464742	789624	24	119,168,93,109,86,98,111,99,139,145,105,95,150,87,57,93,58,195,105,53,53,133,110,291,	0,1422,3076,37860,51217,52430,73356,133208,137769,144600,144833,155024,155738,169014,169666,170780,170965,171149,172046,237838,238232,241248,265199,266393,
#Partially deleted in new
chr1	74198241	74204491	chr1:74198241-74204491	1	+	74198278	74201401	789624	4	185,182,93,101,	0,1422,3076,6149,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	74198243	74375848	chr1:74198243-74375848	1	+	74198278	74370411	8553170	19	117,168,93,109,86,98,111,99,139,145,105,95,150,87,57,93,58,195,5561,	0,1420,3074,37858,51215,52428,73354,133206,137767,144598,144831,155022,155736,169012,169664,170778,170963,171147,172044,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	74198243	74204467	chr1:74198243-74204467	0	+	74198278	74200747	789624	5	117,168,127,93,77,	0,1420,2448,3074,6147,
#Partially deleted in new
chr1	74198248	74367964	chr1:74198248-74367964	0	+	74198278	74367964	789624	5	112,168,93,87,57,	0,1415,3069,169007,169659,
#Partially deleted in new
chr1	74198263	74240683	chr1:74198263-74240683	1	+	74198278	74239959	789624	5	97,168,93,109,728,	0,1400,3054,37838,41692,
#Partially deleted in new
chr1	74198266	74206223	chr1:74198266-74206223	1	+	74198278	74205832	789624	5	94,168,93,66,1005,	0,1397,3051,6124,6952,
#Partially deleted in new
chr1	74198350	74204577	chr1:74198350-74204577	0	+	74198350	74204577	789624	4	76,168,93,187,	0,1313,2967,6040,
#Partially deleted in new
chr1	74235400	74544424	chr1:74235400-74544424	3	+	74235451	74543982	0	25	91,109,86,98,111,99,139,145,105,95,150,87,57,93,58,195,105,53,53,133,110,60,170,80,519,	0,701,14058,15271,36197,96049,100610,107441,107674,117865,118579,131855,132507,133621,133806,133990,134887,200679,201073,204089,228040,253788,256696,304833,308505,
#Partially deleted in new
chr1	74336126	74346174	chr1:74336126-74346174	0	+	74336126	74336126	8553170	4	23,145,105,297,	0,6715,6948,9751,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	74341578	74378802	chr1:74341578-74378802	3	-	74341578	74341578	8553170	4	409,144,131,107,	0,25004,27410,37117,
#Deleted in new
chr1	74369019	74369919	chr1:74369019-74369919	0	+	74369019	74369019	8553170	3	95,58,529,	0,187,371,
#Partially deleted in new
chr1	74369220	74439539	chr1:74369220-74439539	0	+	74369220	74439539	789624	6	44,195,105,119,53,50,	0,170,1067,32618,67253,70269,
#Partially deleted in new
chr1	74369233	74418346	chr1:74369233-74418346	0	+	74369233	74418177	789624	4	31,195,105,179,	0,157,1054,48934,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	74376600	74378719	chr1:74376600-74378719	0	-	74376600	74376600	8553170	2	576,65,	0,2054,
#Partially deleted in new
chr1	74439064	74463549	chr1:74439064-74463549	0	+	74439064	74439064	8553170	2	558,109,	0,24376,
#Deleted in new
chr1	74468194	74469124	chr1:74468194-74469124	1	+	74468194	74468194	8553170	2	355,142,	0,788,
#Deleted in new
chr1	74468512	74469543	chr1:74468512-74469543	3	+	74468512	74468512	8553170	2	37,408,	0,623,
#Partially deleted in new
chr1	74469877	74512614	chr1:74469877-74512614	3	-	74469877	74483349	789624	5	2324,516,816,114,89,	0,5417,10275,13384,42648,
#Partially deleted in new
chr1	74540254	74544428	chr1:74540254-74544428	0	+	74540254	74540254	8553170	3	59,74,523,	0,1282,3651,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	74568110	74673738	chr1:74568110-74673738	3	-	74571116	74673519	789624	15	2329,2393,42,450,237,302,187,181,216,159,129,72,126,94,242,	0,2988,8784,21520,31584,38490,44512,52623,63602,68169,73220,74916,78556,81111,105386,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	74568116	74579763	chr1:74568116-74579763	0	-	74568116	74568116	8553170	3	2323,2393,360,	0,2982,11287,
#Partially deleted in new
chr1	74573474	74578578	chr1:74573474-74578578	0	-	74573474	74573474	8553170	4	17,42,59,468,	0,3420,3700,4636,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	74577429	74626098	chr1:74577429-74626098	3	+	74577429	74577429	789624	3	80,91,4703,	0,37776,43966,
#Partially deleted in new
chr1	74589326	74634855	chr1:74589326-74634855	1	-	74589613	74634676	789624	7	754,237,302,187,181,216,191,	0,10368,17274,23296,31407,42386,45338,
#Partially deleted in new
chr1	74589734	74621719	chr1:74589734-74621719	0	+	74589734	74589734	789624	3	173,91,324,	0,25471,31661,
#Partially deleted in new
chr1	74589802	74592246	chr1:74589802-74592246	0	+	74589802	74589802	8553170	2	105,324,	0,2120,
#Partially deleted in new
chr1	74612783	74634741	chr1:74612783-74634741	0	-	74623180	74634676	789624	5	26,181,238,216,77,	0,7950,10264,18929,21881,
#Deleted in new
chr1	74698768	74699333	chr1:74698768-74699333	3	-	74698768	74698768	8553170	1	565,	0,
#Partially deleted in new
chr1	74705481	74733018	chr1:74705481-74733018	1	-	74706295	74723134	0	7	976,96,102,150,52,153,63,	0,1417,1621,4616,9097,17636,27474,
#Partially deleted in new
chr1	74705485	74733030	chr1:74705485-74733030	1	-	74706295	74724821	0	9	972,96,102,150,52,164,153,124,75,	0,1413,1617,4612,9093,13723,17632,19225,27470,
#Deleted in new
chr1	74705487	74708827	chr1:74705487-74708827	0	-	74705487	74705487	8553170	2	970,1929,	0,1411,
#Partially deleted in new
chr1	74705489	74733408	chr1:74705489-74733408	3	-	74706295	74724821	0	10	968,96,102,150,52,164,153,124,39,453,	0,1409,1613,4608,9089,13719,17628,19221,24892,27466,
#Partially deleted in new
chr1	74705971	74733022	chr1:74705971-74733022	1	-	74706295	74724821	0	8	486,96,150,52,164,153,124,67,	0,927,4126,8607,13237,17146,18739,26984,
#Partially deleted in new
chr1	74707104	74733061	chr1:74707104-74733061	0	-	74707104	74724821	789624	8	100,150,52,164,153,124,39,106,	0,2993,7474,12104,16013,17606,23277,25851,
#Partially deleted in new
chr1	74710108	74732811	chr1:74710108-74732811	0	-	74710108	74724821	789624	6	139,52,164,153,124,45,	0,4470,9100,13009,14602,22658,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	74733151	74766674	chr1:74733151-74766674	1	+	74733244	74764113	789624	5	267,81,72,134,2781,	0,3390,15599,19140,30742,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	74733155	74766674	chr1:74733155-74766674	3	+	74733244	74764113	789624	6	263,81,99,72,134,2781,	0,3386,5534,15595,19136,30738,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	74733246	74764400	chr1:74733246-74764400	1	+	74748756	74764113	789624	7	172,65,81,99,72,134,507,	0,871,3295,5443,15504,19045,30647,
#Partially deleted in new
chr1	74736188	74752394	chr1:74736188-74752394	0	+	74748756	74752394	789624	4	434,99,72,103,	0,2501,12562,16103,
#Partially deleted in new
chr1	74748640	74763989	chr1:74748640-74763989	0	+	74748640	74748640	8553170	4	182,134,101,96,	0,3651,13018,15253,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	74750122	74752375	chr1:74750122-74752375	0	+	74750122	74750122	8553170	3	154,394,84,	0,926,2169,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	74751133	74764001	chr1:74751133-74764001	0	+	74751133	74751133	8553170	3	309,134,108,	0,1158,12760,
#Deleted in new
chr1	75122517	75123927	chr1:75122517-75123927	3	-	75122517	75122517	8553170	1	1410,	0,
#Deleted in new
chr1	75127829	75133058	chr1:75127829-75133058	3	-	75127829	75127829	8553170	2	424,246,	0,4983,
#Partially deleted in new
chr1	75128433	75161533	chr1:75128433-75161533	1	+	75130714	75160895	789624	10	175,507,87,162,122,221,104,96,184,715,	0,1792,8169,8666,12551,14684,15411,20153,28459,32385,
#Deleted in new
chr1	75129973	75132576	chr1:75129973-75132576	3	-	75129973	75129973	8553170	2	1980,223,	0,2380,
#Partially deleted in new
chr1	75134881	75161533	chr1:75134881-75161533	3	+	75136614	75160895	789624	9	73,87,162,122,221,104,96,184,715,	0,1721,2218,6103,8236,8963,13705,22011,25937,
#Deleted in new
chr1	75159287	75161531	chr1:75159287-75161531	0	+	75159287	75159287	8553170	1	2244,	0,
#Deleted in new
chr1	75183044	75183147	chr1:75183044-75183147	3	+	75183044	75183044	8553170	1	103,	0,
#Partially deleted in new
chr1	75202130	75611116	chr1:75202130-75611116	1	-	75203726	75541447	789624	24	1703,85,89,71,74,104,95,263,88,93,100,132,113,84,124,61,126,85,85,74,49,39,82,77,	0,9337,11574,11788,12474,13623,15735,16359,17126,17669,20230,25595,31855,34856,36382,39870,40755,49079,72827,98481,137451,194452,339304,408909,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr1	75204474	75611084	chr1:75204474-75611084	3	-	75206606	75541447	789624	24	2245,85,89,71,74,104,95,263,88,93,100,132,113,84,124,61,126,85,85,74,49,39,82,45,	0,6993,9230,9444,10130,11279,13391,14015,14782,15325,17886,23251,29511,32512,34038,37526,38411,46735,70483,96137,135107,192108,336960,406565,
#Partially deleted in new
chr1	75242919	75611096	chr1:75242919-75611096	0	-	75242919	75242919	8553170	10	92,85,85,74,91,49,39,67,82,57,	0,8290,32038,57692,68695,96662,153663,155435,298515,368120,
#Deleted in new
chr1	75521561	75522231	chr1:75521561-75522231	7	+	75521561	75521561	16724991	1	670,	0,
#Deleted in new
chr1	75538014	75538119	chr1:75538014-75538119	3	-	75538014	75538014	8553170	1	105,	0,
#Deleted in new
chr1	75582098	75582555	chr1:75582098-75582555	7	+	75582098	75582098	16724991	1	457,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	75641177	75724049	chr1:75641177-75724049	7	-	75641177	75641177	16724991	3	1315,57,108,	0,79171,82764,
#Deleted in new
chr1	75641345	75642087	chr1:75641345-75642087	5	-	75641345	75641345	16724991	1	742,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	75710002	75724011	chr1:75710002-75724011	4	-	75710002	75710002	16724991	4	558,57,121,70,	0,10346,13665,13939,
#Partially deleted in new
chr1	75724346	75763679	chr1:75724346-75763679	1	+	75724807	75762763	789624	11	471,98,70,101,81,131,109,141,96,249,988,	0,8297,8506,9181,10444,15633,21459,25072,26104,36775,38345,
#Partially deleted in new
chr1	75724350	75763679	chr1:75724350-75763679	3	+	75724787	75762763	0	12	467,88,98,70,101,81,131,109,141,96,249,988,	0,4050,8293,8502,9177,10440,15629,21455,25068,26100,36771,38341,
#Partially deleted in new
chr1	75724690	75733541	chr1:75724690-75733541	0	+	75724690	75724690	8553170	3	127,98,689,	0,7953,8162,
#Partially deleted in new
chr1	75724705	75761615	chr1:75724705-75761615	0	+	75724787	75732852	789624	11	112,88,98,85,101,81,131,109,141,96,494,	0,3695,7938,8132,8822,10085,15274,21100,24713,25745,36416,
#Partially deleted in new
chr1	75724705	75762954	chr1:75724705-75762954	0	+	75724787	75732868	789624	11	112,98,70,101,81,131,109,141,96,249,263,	0,7938,8147,8822,10085,15274,21100,24713,25745,36416,37986,
#Partially deleted in new
chr1	75724708	75763491	chr1:75724708-75763491	1	+	75724787	75762763	789624	13	109,88,98,70,99,101,81,131,109,141,96,249,800,	0,3692,7935,8144,8342,8819,10082,15271,21097,24710,25742,36413,37983,
#Partially deleted in new
chr1	75724708	75749554	chr1:75724708-75749554	0	+	75724787	75732872	789624	8	109,88,70,101,81,131,109,136,	0,3692,8144,8819,10082,15271,21097,24710,
#Partially deleted in new
chr1	75724708	75733339	chr1:75724708-75733339	0	+	75724708	75724708	8553170	5	109,88,98,70,289,	0,3692,7935,8144,8342,
#Partially deleted in new
chr1	75724754	75733182	chr1:75724754-75733182	0	+	75724754	75724754	8553170	4	63,88,98,330,	0,3646,7889,8098,
#Partially deleted in new
chr1	75724760	75749541	chr1:75724760-75749541	0	+	75724787	75740014	789624	5	57,88,131,109,123,	0,3640,15219,21045,24658,
#Partially deleted in new
chr1	75724766	75763168	chr1:75724766-75763168	0	+	75724787	75732868	789624	9	51,98,70,131,109,141,96,249,477,	0,7877,8086,15213,21039,24652,25684,36355,37925,
#Partially deleted in new
chr1	75724779	75762809	chr1:75724779-75762809	1	+	75724787	75762763	0	12	38,100,98,70,101,81,131,109,141,96,249,118,	0,3609,7864,8073,8748,10011,15200,21026,24639,25671,36342,37912,
#Partially deleted in new
chr1	75732515	75762945	chr1:75732515-75762945	0	+	75732515	75732515	8553170	9	226,70,81,131,109,141,96,249,254,	0,337,2275,7464,13290,16903,17935,28606,30176,
#Partially deleted in new
chr1	75734630	75749518	chr1:75734630-75749518	0	+	75734630	75734630	8553170	4	241,131,109,100,	0,5349,11175,14788,
#Deleted in new
chr1	75743422	75744776	chr1:75743422-75744776	7	-	75743422	75743422	16724991	1	1354,	0,
#Partially deleted in new
chr1	75745476	75761208	chr1:75745476-75761208	0	+	75745476	75745476	8553170	4	438,141,96,87,	0,3942,4974,15645,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	75786196	75794833	chr1:75786196-75794833	0	+	75786196	75786196	789624	7	78,3021,53,111,126,150,324,	0,1300,5088,5264,5984,7887,8313,
#Partially deleted in new
chr1	75786200	75795079	chr1:75786200-75795079	3	+	75786271	75794650	789624	9	74,108,198,106,53,111,126,150,570,	0,1296,2958,3751,5084,5260,5980,7883,8309,
#Partially deleted in new
chr1	75786227	75791571	chr1:75786227-75791571	0	+	75786227	75786227	8553170	7	47,98,108,198,106,53,111,	0,472,1269,2931,3724,5057,5233,
#Partially deleted in new
chr1	75786227	75792254	chr1:75786227-75792254	0	+	75786227	75786227	8553170	7	47,108,323,72,53,111,74,	0,1269,3724,4218,5057,5233,5953,
#Partially deleted in new
chr1	75786230	75790113	chr1:75786230-75790113	1	+	75786271	75790101	789624	4	44,108,198,162,	0,1266,2928,3721,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	75786242	75788783	chr1:75786242-75788783	0	+	75786242	75786242	8553170	2	32,1287,	0,1254,
#Partially deleted in new
chr1	75786698	75789996	chr1:75786698-75789996	0	+	75786698	75786698	8553170	4	218,108,198,45,	0,798,2460,3253,
#Partially deleted in new
chr1	75786699	75792286	chr1:75786699-75792286	0	+	75786699	75786699	8553170	7	166,108,198,106,53,111,106,	0,797,2459,3252,4585,4761,5481,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	75786700	75794803	chr1:75786700-75794803	0	+	75786700	75786700	8553170	10	904,198,106,123,72,53,111,126,150,294,	0,2458,3251,3451,3745,4584,4760,5480,7383,7809,
#Partially deleted in new
chr1	75786702	75792302	chr1:75786702-75792302	0	+	75786702	75786702	8553170	7	263,108,198,106,53,111,122,	0,794,2456,3249,4582,4758,5478,
#Deleted in new
chr1	75787071	75787150	chr1:75787071-75787150	3	+	75787071	75787071	789624	1	79,	0,
#Partially deleted in new
chr1	75787495	75792250	chr1:75787495-75792250	0	+	75787495	75787495	8553170	5	109,1359,53,111,70,	0,1663,3789,3965,4685,
#Partially deleted in new
chr1	75787522	75791518	chr1:75787522-75791518	0	+	75787522	75787522	8553170	6	82,198,123,72,53,58,	0,1636,2629,2923,3762,3938,
#Deleted in new
chr1	75787888	75787972	chr1:75787888-75787972	3	+	75787888	75787888	789624	1	84,	0,
#Deleted in new
chr1	75789476	75789548	chr1:75789476-75789548	3	+	75789476	75789476	789624	1	72,	0,
#Partially deleted in new
chr1	75791268	75791859	chr1:75791268-75791859	0	+	75791268	75791268	8553170	2	69,399,	0,192,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	75793381	75794834	chr1:75793381-75794834	0	+	75793381	75793381	8553170	2	852,325,	0,1128,
#Partially deleted in new
chr1	75796881	75913238	chr1:75796881-75913238	3	+	75796985	75912887	789624	20	348,183,161,111,116,174,173,68,75,65,170,137,104,125,201,119,129,175,89,543,	0,6849,10099,13815,18139,19491,25527,51327,70632,80054,81267,82110,83168,84364,86739,92369,93814,101025,102736,115814,
#Partially deleted in new
chr1	75918872	75932431	chr1:75918872-75932431	3	-	75918951	75932291	789624	3	286,280,541,	0,3207,13018,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	75932478	76019356	chr1:75932478-76019356	3	+	75932478	75932478	8553170	8	138,53,116,152,114,102,71,223,	0,1955,50966,64936,78261,78818,80781,86655,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	76003025	76019350	chr1:76003025-76019350	0	+	76003025	76003025	8553170	5	152,114,102,71,217,	0,7714,8271,10234,16108,
#Partially deleted in new
chr1	76041690	76066228	chr1:76041690-76066228	3	+	76041690	76041690	8553170	2	208,191,	0,24347,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	76074718	76634601	chr1:76074718-76634601	3	+	76074866	76628806	789624	5	166,195,410,108,5982,	0,239086,337289,552733,553901,
#Partially deleted in new
chr1	76313799	76413003	chr1:76313799-76413003	1	+	76412007	76413003	789624	3	200,410,7,	0,98208,99197,
#Partially deleted in new
chr1	76313912	76577209	chr1:76313912-76577209	0	+	76313912	76313912	8553170	3	87,410,364,	0,98095,262933,
#Deleted in new
chr1	76353582	76354246	chr1:76353582-76354246	7	-	76353582	76353582	16724991	1	664,	0,
#Deleted in new
chr1	76636876	76637339	chr1:76636876-76637339	3	+	76636876	76636876	8553170	1	463,	0,
#Deleted in new
chr1	76699788	76700538	chr1:76699788-76700538	7	+	76699788	76699788	16724991	1	750,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	76753134	76753240	chr1:76753134-76753240	3	+	76753134	76753134	8553170	1	106,	0,
#Partially deleted in new
chr1	76758123	76779267	chr1:76758123-76779267	3	-	76758123	76758123	789624	3	45,125,278,	0,156,20866,
#Partially deleted in new
chr1	76867440	77065711	chr1:76867440-77065711	3	+	76867675	77063206	789624	5	250,246,410,108,2737,	0,1056,176763,182817,195534,
#Partially deleted in new
chr1	76867479	77064058	chr1:76867479-77064058	0	+	76867675	77050301	789624	5	211,246,410,104,1084,	0,1017,176724,182782,195495,
#Deleted in new
chr1	76867479	76871383	chr1:76867479-76871383	0	+	76867479	76867479	8553170	3	211,246,116,	0,1017,3788,
#Deleted in new
chr1	76867481	76869074	chr1:76867481-76869074	0	+	76867481	76867481	8553170	2	209,578,	0,1015,
#Partially deleted in new
chr1	76995456	77050316	chr1:76995456-77050316	0	+	76995456	76995456	8553170	3	64,410,59,	0,48747,54801,
#Deleted in new
chr1	77060142	77060202	chr1:77060142-77060202	3	+	77060142	77060142	5263520	1	60,	0,
#Partially deleted in new
chr1	77067919	77078482	chr1:77067919-77078482	3	+	77067919	77067919	8553170	4	82,164,108,143,	0,164,816,10420,
#Partially deleted in new
chr1	77088989	77219426	chr1:77088989-77219426	3	-	77092373	77219402	789624	11	3501,85,173,111,118,97,112,136,92,54,117,	0,33285,65459,72305,72604,74856,77729,80270,117650,121446,130320,
#Partially deleted in new
chr1	77088989	77219430	chr1:77088989-77219430	1	-	77092373	77219402	789624	8	3501,85,173,111,118,97,112,121,	0,33285,65459,72305,72604,74856,77729,130320,
#Partially deleted in new
chr1	77092201	77169319	chr1:77092201-77169319	0	-	77163918	77169319	789624	7	289,85,173,111,118,97,60,	0,30073,62247,69093,69392,71644,77058,
#Deleted in new
chr1	77129113	77129668	chr1:77129113-77129668	7	+	77129113	77129113	16724991	1	555,	0,
#Partially deleted in new
chr1	77153535	77219429	chr1:77153535-77219429	1	-	77154435	77219402	789624	9	1086,111,118,97,112,136,92,54,120,	0,7759,8058,10310,13183,15724,53104,56900,65774,
#Partially deleted in new
chr1	77154493	77219426	chr1:77154493-77219426	0	-	77154493	77154493	8553170	7	128,111,118,97,112,54,117,	0,6801,7100,9352,12225,55942,64816,
#Deleted in new
chr1	77194824	77195395	chr1:77194824-77195395	7	+	77194824	77194824	16724991	1	571,	0,
#Partially deleted in new
chr1	77282050	77559969	chr1:77282050-77559969	3	+	77282313	77558670	0	14	323,187,168,170,114,192,91,77,43,45,164,117,192,1368,	0,4890,11742,15508,15783,58326,128930,135588,201266,204257,236513,239776,253796,276551,
#Partially deleted in new
chr1	77282057	77315060	chr1:77282057-77315060	0	+	77282057	77282057	8553170	6	316,187,96,170,114,1266,	0,4883,11807,15501,15776,31737,
#Partially deleted in new
chr1	77282601	77559962	chr1:77282601-77559962	1	+	77286958	77558670	0	14	1010,185,168,170,114,192,91,77,43,45,164,117,192,1361,	0,4341,11191,14957,15232,57775,128379,135037,200715,203706,235962,239225,253245,276000,
#Partially deleted in new
chr1	77283078	77297856	chr1:77283078-77297856	0	+	77286958	77297856	789624	5	105,187,168,170,23,	0,3862,10714,14480,14755,
#Partially deleted in new
chr1	77293529	77297690	chr1:77293529-77297690	0	+	77293529	77293529	8553170	2	431,132,	0,4029,
#Partially deleted in new
chr1	77293792	77298025	chr1:77293792-77298025	0	+	77293792	77293792	8553170	3	168,170,192,	0,3766,4041,
#Partially deleted in new
chr1	77297854	77340881	chr1:77297854-77340881	0	+	77297854	77297854	8553170	2	93,505,	0,42522,
#Partially deleted in new
chr1	77340404	77417849	chr1:77340404-77417849	0	+	77340404	77340404	8553170	3	164,91,211,	0,70576,77234,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	77346045	77349585	chr1:77346045-77349585	3	-	77346045	77346045	8553170	2	221,156,	0,3384,
#Partially deleted in new
chr1	77371377	77535885	chr1:77371377-77535885	0	+	77371377	77371377	8553170	8	90,91,77,43,45,164,117,39,	0,39603,46261,111939,114930,147186,150449,164469,
#Partially deleted in new
chr1	77417692	77558729	chr1:77417692-77558729	0	+	77417692	77535973	789624	6	23,43,45,21,121,128,	0,65624,68615,100871,118225,140909,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	77420324	77420386	chr1:77420324-77420386	3	+	77420324	77420324	8553170	1	62,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	77532106	77558731	chr1:77532106-77558731	1	+	77535873	77558670	789624	3	234,192,130,	0,3740,26495,
#Partially deleted in new
chr1	77540495	77558731	chr1:77540495-77558731	0	+	77540495	77540495	8553170	2	194,130,	0,18106,
#Partially deleted in new
chr1	77557244	77558736	chr1:77557244-77558736	0	+	77557244	77557244	8553170	2	86,135,	0,1357,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	77562415	77631921	chr1:77562415-77631921	0	-	77562415	77562415	8553170	11	3369,101,135,153,96,102,72,113,148,139,72,	0,3665,5916,13652,16358,17111,18582,19360,19563,22101,69434,
#Partially deleted in new
chr1	77564499	77682658	chr1:77564499-77682658	3	-	77565639	77633354	0	15	1285,101,135,153,96,102,72,116,148,139,1556,154,63,134,74,	0,1581,3832,11568,14274,15027,16498,17276,17479,20017,67350,74949,76884,77022,118085,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	77564505	77632876	chr1:77564505-77632876	0	-	77564505	77564505	8553170	10	1279,101,135,153,96,1543,116,148,139,1027,	0,1575,3826,11562,14268,15021,17270,17473,20011,67344,
#Partially deleted in new
chr1	77564887	77683419	chr1:77564887-77683419	1	-	77565639	77639471	789624	14	897,101,135,153,96,102,72,116,148,139,154,63,134,158,	0,1193,3444,11180,13886,14639,16110,16888,17091,19629,74561,76496,76634,118374,
#Partially deleted in new
chr1	77581017	77585043	chr1:77581017-77585043	0	-	77581017	77581017	8553170	5	52,113,148,139,277,	0,758,961,3499,3749,
#Partially deleted in new
chr1	77581817	77585059	chr1:77581817-77585059	0	-	77581817	77581817	8553170	5	71,148,139,63,151,	0,161,2699,2949,3091,
#Deleted in new
chr1	77614868	77614952	chr1:77614868-77614952	7	+	77614868	77614868	16724991	1	84,	0,
#Partially deleted in new
chr1	77633181	77682675	chr1:77633181-77682675	0	-	77633181	77633354	789624	4	224,154,134,91,	0,6267,8340,49403,
#Partially deleted in new
chr1	77633245	77683374	chr1:77633245-77683374	0	-	77633245	77633354	789624	4	160,154,134,113,	0,6203,8276,50016,
#Partially deleted in new
chr1	77633311	77683403	chr1:77633311-77683403	0	-	77633311	77633311	8553170	5	94,154,63,134,142,	0,6137,8072,8210,49950,
#Partially deleted in new
chr1	77640953	77682643	chr1:77640953-77682643	0	-	77640953	77640953	8553170	3	493,134,59,	0,568,41631,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	77645323	77645618	chr1:77645323-77645618	3	+	77645323	77645323	8553170	1	295,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	77676981	77682675	chr1:77676981-77682675	0	-	77676981	77676981	8553170	2	329,91,	0,5603,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr1	77695986	77759852	chr1:77695986-77759852	3	-	77697316	77741697	0	24	1488,69,103,109,82,170,127,181,46,34,95,173,113,141,418,79,114,70,103,153,63,54,132,210,	0,1876,5382,15760,17213,18627,19755,21880,22609,25185,25844,26037,27344,29635,32308,33873,34631,38360,40069,43278,44890,45389,45630,63656,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr1	77695990	77745462	chr1:77695990-77745462	1	-	77697316	77745462	0	24	1484,69,103,109,82,170,127,181,46,34,95,173,113,141,418,79,114,70,103,153,63,54,132,42,	0,1872,5378,15756,17209,18623,19751,21876,22605,25181,25840,26033,27340,29631,32304,33869,34627,38356,40065,43274,44886,45385,45626,49430,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr1	77695990	77759852	chr1:77695990-77759852	1	-	77697316	77745462	0	25	1484,69,103,109,82,170,127,181,46,34,95,173,113,141,418,79,114,70,103,153,63,54,132,179,210,	0,1872,5378,15756,17209,18623,19751,21876,22605,25181,25840,26033,27340,29631,32304,33869,34627,38356,40065,43274,44886,45385,45626,49430,63652,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	77695990	77728336	chr1:77695990-77728336	0	-	77697874	77728336	789624	14	1484,69,109,82,170,127,181,46,34,95,173,113,141,42,	0,1872,15756,17209,18623,19751,21876,22605,25181,25840,26033,27340,29631,32304,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	77697608	77701651	chr1:77697608-77701651	0	-	77697608	77697608	8553170	2	323,283,	0,3760,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	77711501	77713508	chr1:77711501-77713508	0	-	77711501	77711501	8553170	2	354,309,	0,1698,
#Partially deleted in new
chr1	77711664	77721205	chr1:77711664-77721205	0	-	77713250	77721205	789624	6	191,82,127,181,46,34,	0,1535,4077,6202,6931,9507,
#Partially deleted in new
chr1	77711784	77714917	chr1:77711784-77714917	0	-	77711784	77711784	8553170	3	71,82,304,	0,1415,2829,
#Deleted in new
chr1	77717539	77718712	chr1:77717539-77718712	0	-	77717539	77717539	8553170	2	508,117,	0,1056,
#Partially deleted in new
chr1	77717644	77722399	chr1:77717644-77722399	0	-	77717644	77717644	8553170	5	403,46,34,95,376,	0,951,3527,4186,4379,
#Partially deleted in new
chr1	77717777	77721239	chr1:77717777-77721239	0	-	77717777	77717777	8553170	3	270,46,68,	0,818,3394,
#Partially deleted in new
chr1	77718023	77721738	chr1:77718023-77721738	0	-	77718023	77718023	8553170	3	24,46,567,	0,572,3148,
#Partially deleted in new
chr1	77739310	77759846	chr1:77739310-77759846	0	-	77739310	77739310	8553170	5	107,58,54,132,146,	0,1566,2065,2306,20390,
#Partially deleted in new
chr1	77739330	77759811	chr1:77739330-77759811	0	-	77739330	77739330	8553170	5	87,58,54,132,169,	0,1546,2045,2286,20312,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	77739376	77759388	chr1:77739376-77759388	0	-	77739376	77745462	789624	6	41,63,54,132,218,41,	0,1500,1999,2240,6044,19971,
#Partially deleted in new
chr1	77739397	77759820	chr1:77739397-77759820	0	-	77739397	77741697	789624	5	20,63,54,132,120,	0,1479,1978,2219,20303,
#Partially deleted in new
chr1	77773864	77774864	chr1:77773864-77774864	7	-	77773864	77773864	16724991	1	1000,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	77779623	77878421	chr1:77779623-77878421	3	+	77779655	77875064	789624	16	113,114,178,137,127,134,124,101,119,73,87,99,135,54,117,3576,	0,3614,21707,23646,27351,34110,35484,63683,79314,79690,80416,81600,84270,86714,93380,95222,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	77779623	77879539	chr1:77779623-77879539	1	+	77779655	77875064	789624	16	113,114,178,137,127,134,124,101,119,73,87,99,135,54,120,4694,	0,3614,21707,23646,27351,34110,35484,63683,79314,79690,80416,81600,84270,86714,93377,95222,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	77779629	77878325	chr1:77779629-77878325	0	+	77779655	77875064	789624	17	107,114,178,137,127,134,124,101,119,73,87,99,135,54,117,1318,1273,	0,3608,21701,23640,27345,34104,35478,63677,79308,79684,80410,81594,84264,86708,93374,95216,97423,
#Partially deleted in new
chr1	77779629	77879039	chr1:77779629-77879039	1	+	77783252	77878800	789624	15	107,114,178,137,127,134,124,101,119,73,87,99,135,54,284,	0,3608,21701,23640,27345,34104,35478,63677,79308,79684,80410,81594,84264,86708,99126,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	77779629	77868636	chr1:77779629-77868636	1	+	77779655	77868442	789624	15	107,114,178,137,127,134,124,101,119,73,87,99,135,54,389,	0,3608,21701,23640,27345,34104,35478,63677,79308,79684,80410,81594,84264,86708,88618,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	77779635	77878378	chr1:77779635-77878378	1	+	77779655	77875064	789624	16	101,30,178,137,127,134,124,101,119,73,87,99,135,54,117,3533,	0,3602,21695,23634,27339,34098,35472,63671,79302,79678,80404,81588,84258,86702,93368,95210,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	77779762	77878376	chr1:77779762-77878376	1	+	77783252	77875064	789624	16	430,114,178,137,127,134,124,101,119,73,87,99,135,54,120,3531,	0,3475,21568,23507,27212,33971,35345,63544,79175,79551,80277,81461,84131,86575,93238,95083,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	77779774	77878378	chr1:77779774-77878378	1	+	77783252	77875064	789624	16	193,109,178,137,127,134,124,101,119,73,87,99,135,54,117,3533,	0,3468,21556,23495,27200,33959,35333,63532,79163,79539,80265,81449,84119,86563,93229,95071,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	77779903	77779999	chr1:77779903-77779999	7	+	77779903	77779903	16724991	1	96,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	77803388	77862215	chr1:77803388-77862215	0	+	77803388	77803388	8553170	6	18,127,134,124,101,3278,	0,3586,10345,11719,39918,55549,
#Deleted in new
chr1	77810860	77811781	chr1:77810860-77811781	7	-	77810860	77810860	16724991	1	921,	0,
#Deleted in new
chr1	77847109	77848802	chr1:77847109-77848802	7	+	77847109	77847109	16724991	1	1693,	0,
#Partially deleted in new
chr1	77853354	77853893	chr1:77853354-77853893	7	+	77853354	77853354	16724991	2	90,161,	0,378,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	77881347	77889539	chr1:77881347-77889539	3	-	77881347	77881347	789624	3	551,1669,72,	0,6252,8120,
#Partially deleted in new
chr1	77888512	77933384	chr1:77888512-77933384	0	+	77916106	77933384	789624	9	247,79,79,149,42,198,177,189,103,	0,27542,29447,29612,36675,37901,38203,40803,44769,
#Partially deleted in new
chr1	77888514	77943891	chr1:77888514-77943891	1	+	77916106	77942829	789624	12	245,79,79,149,42,198,177,189,198,222,186,1431,	0,27540,29445,29610,36673,37899,38201,40801,44767,47308,53508,53946,
#Partially deleted in new
chr1	77888627	77943224	chr1:77888627-77943224	3	+	77916106	77942829	789624	13	132,79,192,79,149,42,198,177,189,198,222,186,764,	0,27427,28938,29332,29497,36560,37786,38088,40688,44654,47195,53395,53833,
#Partially deleted in new
chr1	77888661	77935919	chr1:77888661-77935919	0	+	77916106	77935919	789624	10	98,79,192,79,149,198,177,189,198,97,	0,27393,28904,29298,29463,37752,38054,40654,44620,47161,
#Partially deleted in new
chr1	77918127	77943895	chr1:77918127-77943895	0	+	77918127	77942913	789624	10	146,42,198,177,189,198,222,186,358,996,	0,7060,8286,8588,11188,15154,17695,23895,24333,24772,
#Partially deleted in new
chr1	77926568	77935970	chr1:77926568-77935970	0	+	77926568	77926568	8553170	4	324,189,198,148,	0,2747,6713,9254,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	77931661	77943199	chr1:77931661-77943199	0	+	77931661	77931661	8553170	5	393,432,222,186,739,	0,1386,4161,10361,10799,
#Deleted in new
chr1	77941710	77942753	chr1:77941710-77942753	0	+	77941710	77941710	8553170	2	498,293,	0,750,
#Deleted in new
chr1	77944054	77947692	chr1:77944054-77947692	0	-	77944054	77944054	8553170	4	215,137,47,240,	0,1451,2475,3398,
#Deleted in new
chr1	77944054	77946576	chr1:77944054-77946576	0	-	77944054	77944054	8553170	2	215,47,	0,2475,
#Deleted in new
chr1	77944054	77945895	chr1:77944054-77945895	0	-	77944054	77944054	8553170	2	215,390,	0,1451,
#Deleted in new
chr1	77944054	77949267	chr1:77944054-77949267	0	-	77944054	77944054	8553170	5	215,137,47,100,113,	0,1451,2475,3398,5100,
#Deleted in new
chr1	77944054	77948333	chr1:77944054-77948333	0	-	77944054	77944054	8553170	3	215,137,1804,	0,1451,2475,
#Partially deleted in new
chr1	77944054	77955282	chr1:77944054-77955282	0	-	77944054	77944054	8553170	6	215,137,47,95,146,28,	0,1451,2475,3398,5100,11200,
#Partially deleted in new
chr1	77944054	77955339	chr1:77944054-77955339	0	-	77944054	77944054	8553170	4	215,137,146,85,	0,1451,5100,11200,
#Partially deleted in new
chr1	77946481	77979087	chr1:77946481-77979087	0	-	77947513	77979004	0	21	95,100,146,75,129,80,152,161,142,101,103,102,99,163,58,72,50,40,39,91,203,	0,971,2673,8773,10090,13702,13862,16288,17092,17580,17772,18164,18388,18587,20212,20402,20567,21145,21683,23443,32403,
#Partially deleted in new
chr1	77948404	77979092	chr1:77948404-77979092	1	-	77948872	77979004	789624	20	510,146,75,129,80,152,161,142,101,103,102,99,163,58,72,53,40,39,91,208,	0,750,6850,8167,11779,11939,14365,15169,15657,15849,16241,16465,16664,18289,18479,18644,19222,19760,21520,30480,
#Partially deleted in new
chr1	77948404	77979086	chr1:77948404-77979086	3	-	77948765	77979004	0	20	370,146,75,129,80,152,161,142,101,103,102,99,163,58,72,53,40,39,91,202,	0,750,6850,8167,11779,11939,14365,15169,15657,15849,16241,16465,16664,18289,18479,18644,19222,19760,21520,30480,
#Partially deleted in new
chr1	77948969	77955458	chr1:77948969-77955458	0	-	77948969	77948969	8553170	2	331,204,	0,6285,
#Partially deleted in new
chr1	77955254	77960785	chr1:77955254-77960785	0	-	77955254	77955254	8553170	4	75,129,80,442,	0,1317,4929,5089,
#Partially deleted in new
chr1	77965068	77979110	chr1:77965068-77979110	0	-	77965068	77979004	789624	9	163,58,72,50,40,39,63,91,226,	0,1625,1815,1980,2558,3096,3953,4856,13816,
#Partially deleted in new
chr1	77979174	78016274	chr1:77979174-78016274	0	+	77979174	77979174	8553170	3	119,569,261,	0,33876,36839,
#Partially deleted in new
chr1	77979280	78013617	chr1:77979280-78013617	0	+	77979280	77979280	8553170	2	339,567,	0,33770,
#Partially deleted in new
chr1	77979541	78092804	chr1:77979541-78092804	0	+	77979541	77979541	8553170	3	78,186,48,	0,101133,113215,
#Partially deleted in new
chr1	77980183	78013355	chr1:77980183-78013355	0	+	78005110	78013355	789624	3	139,242,305,	0,24896,32867,
#Deleted in new
chr1	78004345	78004554	chr1:78004345-78004554	3	-	78004345	78004345	8553170	1	209,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	78004853	78017964	chr1:78004853-78017964	3	+	78005110	78016247	789624	3	468,569,1951,	0,8197,11160,
#Partially deleted in new
chr1	78004934	78016299	chr1:78004934-78016299	0	+	78004934	78004934	8553170	2	387,286,	0,11079,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	78022564	78024861	chr1:78022564-78024861	3	-	78022564	78022564	8553170	2	1770,25,	0,2272,
#Deleted in new
chr1	78043382	78044148	chr1:78043382-78044148	7	-	78043382	78043382	16724991	1	766,	0,
#Partially deleted in new
chr1	78045901	78138449	chr1:78045901-78138449	3	+	78046094	78135743	0	6	433,186,181,107,82,2858,	0,34773,49050,73491,79979,89690,
#Deleted in new
chr1	78088987	78089083	chr1:78088987-78089083	3	-	78088987	78088987	8553170	1	96,	0,
#Deleted in new
chr1	78091498	78092054	chr1:78091498-78092054	7	+	78091498	78091498	16724991	1	556,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	78094806	78094915	chr1:78094806-78094915	7	-	78094806	78094806	16724991	1	109,	0,
#Partially deleted in new
chr1	78170480	78171237	chr1:78170480-78171237	7	-	78170480	78170480	16724991	1	757,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	78229598	78293890	chr1:78229598-78293890	3	+	78229598	78229598	8553170	6	131,827,384,152,199,300,	0,20585,21895,62881,63480,63992,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	78229621	78369464	chr1:78229621-78369464	0	+	78229621	78229621	789624	6	108,190,384,115,191,182,	0,20562,21872,112904,138915,139661,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	78303883	78539749	chr1:78303883-78539749	3	+	78492743	78536687	789624	4	48,75,870,3344,	0,95067,188788,232522,
#Deleted in new
chr1	78317156	78317263	chr1:78317156-78317263	7	-	78317156	78317156	16724991	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	78375163	78375268	chr1:78375163-78375268	7	-	78375163	78375163	16724991	1	105,	0,
#Partially deleted in new
chr1	78491071	78539749	chr1:78491071-78539749	1	+	78492743	78536430	789624	4	165,870,71,3344,	0,1600,6802,45334,
#Partially deleted in new
chr1	78491071	78539749	chr1:78491071-78539749	1	+	78492743	78536687	789624	3	165,870,3344,	0,1600,45334,
#Partially deleted in new
chr1	78491071	78537010	chr1:78491071-78537010	0	+	78492743	78532237	789624	5	165,870,71,141,605,	0,1600,6802,41141,45334,
#Partially deleted in new
chr1	78619921	78628207	chr1:78619921-78628207	0	+	78627915	78628207	789624	3	137,115,302,	0,535,7984,
#Partially deleted in new
chr1	78620381	78641968	chr1:78620381-78641968	0	+	78620381	78620381	8553170	8	190,49,196,153,104,101,175,194,	0,8569,9338,14955,16718,20639,21053,21393,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	78620402	78646145	chr1:78620402-78646145	3	+	78627915	78641809	789624	9	169,488,49,196,153,172,101,175,4371,	0,7503,8548,9317,14934,16629,20618,21032,21372,
#Partially deleted in new
chr1	78620448	78637161	chr1:78620448-78637161	0	+	78620448	78620448	8553170	6	123,94,49,196,153,130,	0,429,8502,9271,14888,16583,
#Partially deleted in new
chr1	78620468	78641550	chr1:78620468-78641550	0	+	78620468	78620468	8553170	7	103,49,196,153,172,101,116,	0,8482,9251,14868,16563,20552,20966,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	78625669	78642799	chr1:78625669-78642799	0	+	78625669	78625669	8553170	7	3330,196,153,172,101,175,1025,	0,4050,9667,11362,15351,15765,16105,
#Deleted in new
chr1	78627905	78631647	chr1:78627905-78631647	0	+	78627905	78627905	8553170	4	113,49,196,207,	0,1045,1814,3535,
#Deleted in new
chr1	78627984	78630187	chr1:78627984-78630187	0	+	78627984	78630037	789624	4	409,49,196,195,	0,966,1735,2008,
#Partially deleted in new
chr1	78629634	78635983	chr1:78629634-78635983	0	+	78629634	78629634	8553170	2	281,647,	0,5702,
#Partially deleted in new
chr1	78636691	78641485	chr1:78636691-78641485	0	+	78636691	78636691	8553170	3	512,101,51,	0,4329,4743,
#Partially deleted in new
chr1	78649795	78662756	chr1:78649795-78662756	0	+	78649795	78649795	8553170	7	110,37,196,150,172,101,53,	0,4447,5218,5566,9516,10758,12908,
#Partially deleted in new
chr1	78649830	78664078	chr1:78649830-78664078	3	+	78650195	78663811	789624	9	75,467,37,196,150,172,101,175,314,	0,355,4412,5183,5531,9481,10723,12873,13934,
#Partially deleted in new
chr1	78649831	78659428	chr1:78649831-78659428	0	+	78650567	78659428	789624	6	74,112,37,196,150,117,	0,709,4411,5182,5530,9480,
#Partially deleted in new
chr1	78649832	78664078	chr1:78649832-78664078	0	+	78649832	78649832	8553170	7	73,37,196,150,172,175,314,	0,4410,5181,5529,9479,12871,13932,
#Partially deleted in new
chr1	78649841	78655511	chr1:78649841-78655511	0	+	78649841	78649841	8553170	4	64,467,37,498,	0,344,4401,5172,
#Partially deleted in new
chr1	78649857	78664078	chr1:78649857-78664078	0	+	78649857	78649857	789624	6	48,37,196,150,172,314,	0,4385,5156,5504,9454,13907,
#Partially deleted in new
chr1	78659318	78663897	chr1:78659318-78663897	0	+	78659318	78659318	8553170	4	165,138,175,133,	0,1235,3385,4446,
#Deleted in new
chr1	78662615	78664078	chr1:78662615-78664078	0	+	78662615	78662615	8553170	2	263,314,	0,1149,
#Deleted in new
chr1	78662734	78664078	chr1:78662734-78664078	0	+	78662734	78663811	789624	2	183,314,	0,1030,
#Deleted in new
chr1	78666271	78666695	chr1:78666271-78666695	7	+	78666271	78666271	16724991	1	424,	0,
#Deleted in new
chr1	78749072	78750659	chr1:78749072-78750659	7	+	78749072	78749072	16724991	1	1587,	0,
#Partially deleted in new
chr1	78889763	79006718	chr1:78889763-79006718	3	-	78891153	79006654	789624	15	1453,169,92,67,221,204,174,206,117,184,180,71,153,150,86,	0,1760,3334,27870,28066,30419,31849,37122,46531,48043,48336,49424,56510,115306,116869,
#Partially deleted in new
chr1	78889763	78917885	chr1:78889763-78917885	0	-	78889814	78917885	789624	6	58,59,169,92,67,56,	0,1394,1760,3334,27870,28066,
#Partially deleted in new
chr1	78891153	79006654	chr1:78891153-79006654	0	-	78939256	79006654	789624	16	63,169,92,67,221,204,174,206,117,184,180,71,150,153,150,22,	0,370,1944,26480,26676,29029,30459,35732,45141,46653,46946,48034,48495,55120,113916,115479,
#Deleted in new
chr1	79054944	79056055	chr1:79054944-79056055	7	-	79054944	79054944	16724991	1	1111,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	79323768	79324863	chr1:79323768-79324863	3	+	79323768	79323768	8553170	2	191,164,	0,931,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	79323768	79324852	chr1:79323768-79324852	3	-	79323768	79323768	8553170	2	292,267,	0,817,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	79325007	79346445	chr1:79325007-79346445	3	+	79325007	79325007	8553170	2	22,1485,	0,19953,
#Partially deleted in new
chr1	79521079	79522203	chr1:79521079-79522203	7	+	79521079	79521079	16724991	1	1124,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	79967732	80051404	chr1:79967732-80051404	3	-	79967732	79967732	8553170	3	138,307,152,	0,82813,83520,
#Partially deleted in new
chr1	80092102	80093237	chr1:80092102-80093237	7	-	80092102	80092102	16724991	1	1135,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	80114942	80116918	chr1:80114942-80116918	3	+	80114942	80114942	8553170	1	1976,	0,
#Deleted in new
chr1	80124003	80124361	chr1:80124003-80124361	7	+	80124003	80124003	16724991	2	79,184,	0,174,
#Deleted in new
chr1	80283351	80283970	chr1:80283351-80283970	7	+	80283351	80283351	16724991	1	619,	0,
#Deleted in new
chr1	80451082	80452004	chr1:80451082-80452004	7	-	80451082	80451082	16724991	1	922,	0,
#Deleted in new
chr1	80464300	80464718	chr1:80464300-80464718	7	-	80464300	80464300	16724991	1	418,	0,
#Deleted in new
chr1	80495902	80496233	chr1:80495902-80496233	7	+	80495902	80495902	16724991	1	331,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	80534977	80584363	chr1:80534977-80584363	3	-	80534977	80534977	8553170	2	275,74,	0,49312,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	80535754	80646788	chr1:80535754-80646788	0	+	80535754	80535754	789624	3	188,129,226,	0,108470,110808,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	80535754	80646788	chr1:80535754-80646788	3	+	80535754	80535754	789624	4	188,48,129,226,	0,4834,108470,110808,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	80641283	80646788	chr1:80641283-80646788	0	+	80641283	80641283	789624	3	118,129,226,	0,2941,5279,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	81080789	81081171	chr1:81080789-81081171	7	+	81080789	81080789	16724991	1	382,	0,
#Deleted in new
chr1	81098266	81099005	chr1:81098266-81099005	7	-	81098266	81098266	16724991	1	739,	0,
#Deleted in new
chr1	81208567	81209210	chr1:81208567-81209210	7	+	81208567	81208567	16724991	1	643,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	81209833	81222076	chr1:81209833-81222076	3	+	81209833	81209833	8553170	2	60,688,	0,11555,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	81251788	81252096	chr1:81251788-81252096	3	+	81251788	81251788	8553170	1	308,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	81306159	81735330	chr1:81306159-81735330	0	+	81306159	81306159	8553170	5	350,69,105,62,241,	0,138861,274716,393587,428930,
#Partially deleted in new
chr1	81306165	81991368	chr1:81306165-81991368	1	+	81836984	81991145	789624	25	344,54,105,42,173,214,110,12,801,96,104,186,184,126,206,174,210,221,67,92,169,129,97,129,978,	0,138870,274710,455645,530719,600851,630562,635868,636803,644221,644852,645791,649711,659892,660238,661860,663012,664148,665686,673703,675642,678417,679093,680735,684225,
#Partially deleted in new
chr1	81306165	81991368	chr1:81306165-81991368	1	+	81836984	81991145	789624	25	344,54,105,42,173,214,110,801,294,104,186,184,126,206,174,210,221,67,92,45,169,129,97,129,978,	0,138870,274710,455645,530719,600851,630562,636803,644023,644852,645791,649711,659892,660238,661860,663012,664148,665686,673703,674629,675642,678417,679093,680735,684225,
#Partially deleted in new
chr1	81306165	81991368	chr1:81306165-81991368	1	+	81836984	81991145	789624	26	344,54,105,42,173,214,110,801,294,104,186,39,184,126,206,174,210,221,67,92,45,169,129,97,129,978,	0,138870,274710,455645,530719,600851,630562,636803,644023,644852,645791,646821,649711,659892,660238,661860,663012,664148,665686,673703,674629,675642,678417,679093,680735,684225,
#Partially deleted in new
chr1	81306165	81991368	chr1:81306165-81991368	1	+	81836984	81991145	789624	25	344,54,105,42,173,214,110,801,294,104,186,39,184,126,206,174,210,221,67,92,45,169,129,97,978,	0,138870,274710,455645,530719,600851,630562,636803,644023,644852,645791,646821,649711,659892,660238,661860,663012,664148,665686,673703,674629,675642,678417,679093,684225,
#Partially deleted in new
chr1	81306165	81992422	chr1:81306165-81992422	1	+	81836984	81991145	789624	25	344,54,105,42,173,214,110,801,294,104,186,39,184,126,206,174,210,221,67,92,169,129,97,129,2032,	0,138870,274710,455645,530719,600851,630562,636803,644023,644852,645791,646821,649711,659892,660238,661860,663012,664148,665686,673703,675642,678417,679093,680735,684225,
#Partially deleted in new
chr1	81306165	81992422	chr1:81306165-81992422	3	+	81836984	81991145	789624	24	344,54,105,42,173,214,110,801,294,104,186,39,184,126,206,174,210,221,67,92,169,129,97,2032,	0,138870,274710,455645,530719,600851,630562,636803,644023,644852,645791,646821,649711,659892,660238,661860,663012,664148,665686,673703,675642,678417,679093,684225,
#Partially deleted in new
chr1	81306191	81414384	chr1:81306191-81414384	0	+	81306191	81306191	8553170	2	318,214,	0,107979,
#Partially deleted in new
chr1	81306198	81992436	chr1:81306198-81992436	0	+	81306198	81306198	8553170	9	311,69,81,105,42,173,214,110,2046,	0,138822,273101,274677,455612,530686,600818,630529,684192,
#Deleted in new
chr1	81426455	81427605	chr1:81426455-81427605	7	+	81426455	81426455	16724991	1	1150,	0,
#Deleted in new
chr1	81501793	81503468	chr1:81501793-81503468	7	+	81501793	81501793	16724991	1	1675,	0,
#Deleted in new
chr1	81505098	81506296	chr1:81505098-81506296	3	+	81505098	81505098	8553170	2	36,307,	0,891,
#Partially deleted in new
chr1	81513879	81557702	chr1:81513879-81557702	3	-	81513879	81513879	789624	4	166,77,361,39,	0,750,955,43784,
#Partially deleted in new
chr1	81557120	81557832	chr1:81557120-81557832	7	-	81557120	81557120	16724991	2	253,268,	0,444,
#Partially deleted in new
chr1	81585940	81625713	chr1:81585940-81625713	3	-	81585940	81585940	8553170	3	437,145,59,	0,2359,39714,
#Deleted in new
chr1	81596156	81596506	chr1:81596156-81596506	7	-	81596156	81596156	16724991	1	350,	0,
#Partially deleted in new
chr1	81699769	81991426	chr1:81699769-81991426	1	+	81836984	81991145	789624	21	39,42,173,214,110,801,294,104,186,184,126,206,174,210,221,67,92,169,129,97,1036,	0,62041,137115,207247,236958,243199,250419,251248,252187,256107,266288,266634,268256,269408,270544,272082,280099,282038,284813,285489,290621,
#Partially deleted in new
chr1	81721692	81723068	chr1:81721692-81723068	7	+	81721692	81721692	16724991	2	313,752,	0,624,
#Partially deleted in new
chr1	81800396	81992196	chr1:81800396-81992196	1	+	81836984	81991145	789624	20	116,173,214,110,801,294,104,186,184,126,206,174,210,221,67,92,169,129,97,1806,	0,36488,106620,136331,142572,149792,150621,151560,155480,165661,166007,167629,168781,169917,171455,179472,181411,184186,184862,189994,
#Partially deleted in new
chr1	81800396	81992196	chr1:81800396-81992196	1	+	81836984	81990402	789624	19	116,173,214,110,801,294,104,186,184,126,206,174,210,221,67,92,169,129,1806,	0,36488,106620,136331,142572,149792,150621,151560,155480,165661,166007,167629,168781,169917,171455,179472,181411,184186,189994,
#Partially deleted in new
chr1	81800396	81992196	chr1:81800396-81992196	1	+	81836984	81989680	789624	22	116,173,214,110,801,294,104,186,184,126,206,174,210,221,67,92,169,129,97,53,53,1806,	0,36488,106620,136331,142572,149792,150621,151560,155480,165661,166007,167629,168781,169917,171455,179472,181411,184186,184862,186892,189260,189994,
#Partially deleted in new
chr1	81800396	81992422	chr1:81800396-81992422	1	+	81836984	81991145	789624	22	116,173,214,110,801,294,104,186,39,184,126,206,174,210,221,67,92,169,129,97,129,2032,	0,36488,106620,136331,142572,149792,150621,151560,152590,155480,165661,166007,167629,168781,169917,171455,179472,181411,184186,184862,186504,189994,
#Partially deleted in new
chr1	81800396	81992422	chr1:81800396-81992422	1	+	81836984	81991145	789624	22	116,173,214,110,801,294,104,186,39,184,126,206,174,210,221,67,92,45,169,129,97,2032,	0,36488,106620,136331,142572,149792,150621,151560,152590,155480,165661,166007,167629,168781,169917,171455,179472,180398,181411,184186,184862,189994,
#Partially deleted in new
chr1	81942968	81991368	chr1:81942968-81991368	0	+	81942968	81991145	789624	20	801,294,104,186,39,184,126,206,174,210,221,67,92,45,27,169,129,97,129,978,	0,7220,8049,8988,10018,12908,23089,23435,25057,26209,27345,28883,36900,37826,38155,38839,41614,42290,43932,47422,
#Partially deleted in new
chr1	81955766	81966435	chr1:81955766-81966435	0	+	81955766	81955766	8553170	3	294,126,32,	0,10291,10637,
#Deleted in new
chr1	81979888	81992423	chr1:81979888-81992423	0	+	81979888	81991145	789624	8	72,45,169,129,97,129,18,2033,	0,906,1919,4694,5370,7012,7980,10502,
#Deleted in new
chr1	81979921	81990681	chr1:81979921-81990681	0	+	81979921	81979921	8553170	6	39,169,129,97,53,291,	0,1886,4661,5337,7367,10469,
#Deleted in new
chr1	81981852	81990840	chr1:81981852-81990840	0	+	81981852	81981852	8553170	5	124,129,97,82,450,	0,2730,3406,5407,8538,
#Deleted in new
chr1	81984316	81985410	chr1:81984316-81985410	0	+	81984316	81984316	8553170	2	395,152,	0,942,
#Deleted in new
chr1	81988391	81990709	chr1:81988391-81990709	0	+	81988391	81988391	8553170	2	35,319,	0,1999,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	82474633	82555551	chr1:82474633-82555551	0	-	82474633	82474633	8553170	3	803,133,403,	0,3935,80515,
#Partially deleted in new
chr1	82477889	82555561	chr1:82477889-82555561	1	-	82477889	82477889	8553170	5	812,426,110,194,413,	0,7536,8274,9241,77259,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	82973881	82984922	chr1:82973881-82984922	3	-	82973881	82973881	789624	3	1237,226,63,	0,5179,10978,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	82973928	82986208	chr1:82973928-82986208	0	-	82973928	82973928	789624	3	1190,226,60,	0,5132,12220,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	83397567	83425353	chr1:83397567-83425353	3	-	83397567	83397567	8553170	8	26,49,101,164,128,108,137,35,	0,129,4093,13779,15831,26327,26532,27751,
#Partially deleted in new
chr1	83445966	83462687	chr1:83445966-83462687	3	+	83445966	83445966	8553170	3	708,222,114,	0,8691,16607,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	83575775	83860996	chr1:83575775-83860996	3	-	83575775	83575775	789624	3	2897,102,178,	0,174422,285043,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	83790279	83801465	chr1:83790279-83801465	3	+	83790279	83790279	8553170	3	163,93,427,	0,10414,10759,
#Partially deleted in new
chr1	83801515	83860546	chr1:83801515-83860546	1	-	83801515	83801515	789624	3	1736,116,139,	0,48391,58892,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr1	83865027	83999132	chr1:83865027-83999132	3	-	83869961	83952211	0	21	5055,174,161,81,135,206,199,87,136,74,148,95,159,165,217,159,68,122,132,201,202,	0,17935,25293,39051,41301,42428,46137,52576,54671,56059,56219,64108,68580,72824,77435,82096,83600,84837,86817,87159,133903,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	83865027	83948936	chr1:83865027-83948936	0	-	83865027	83865027	8553170	18	5055,174,161,81,135,206,199,83,136,74,148,95,159,165,217,413,159,309,	0,17935,25293,39051,41301,42428,46137,52576,54671,56059,56219,64108,68580,72824,77435,80972,82096,83600,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	83865027	83999150	chr1:83865027-83999150	0	-	83887274	83933709	789624	16	5055,119,174,108,161,81,135,206,199,87,136,74,148,95,159,220,	0,17641,17935,22149,25293,39051,41301,42428,46137,52576,54671,56059,56219,64108,68580,133903,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr1	83865027	83999092	chr1:83865027-83999092	0	-	83865027	83865027	8553170	28	4950,91,34,133,174,108,161,87,81,135,206,199,60,108,87,136,74,148,95,159,165,217,159,68,122,132,201,162,	0,14865,15233,17641,17935,22149,25293,37126,39051,41301,42428,46137,47416,47905,52576,54671,56059,56219,64108,68580,72824,77435,82096,83600,84837,86817,87159,133903,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	83865027	83952381	chr1:83865027-83952381	0	-	83906505	83952211	0	20	5055,174,161,81,195,206,199,87,136,74,148,95,159,165,217,159,68,122,132,195,	0,17935,25293,39051,41301,42428,46137,52576,54671,56059,56219,64108,68580,72824,77435,82096,83600,84837,86817,87159,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr1	83865027	83999107	chr1:83865027-83999107	0	-	83865027	83865027	8553170	22	5055,174,108,161,81,135,206,199,101,136,93,74,148,95,159,165,159,68,122,132,201,177,	0,17935,22149,25293,39051,41301,42428,46137,52576,54671,55495,56059,56219,64108,68580,72824,82096,83600,84837,86817,87159,133903,
#Partially deleted in new
chr1	83869697	83882848	chr1:83869697-83882848	0	-	83869697	83869697	8553170	3	385,91,180,	0,10195,12971,
#Partially deleted in new
chr1	83869765	83890342	chr1:83869765-83890342	0	-	83869765	83869765	8553170	5	317,174,19,108,22,	0,13197,15310,17411,20555,
#Partially deleted in new
chr1	83883012	83947626	chr1:83883012-83947626	0	-	83906505	83947281	789624	15	124,161,81,195,206,199,87,136,74,148,95,159,165,217,503,	0,7308,21066,23316,24443,28152,34591,36686,38074,38234,46123,50595,54839,59450,64111,
#Partially deleted in new
chr1	83902008	83907535	chr1:83902008-83907535	0	-	83902008	83902008	8553170	4	232,81,135,80,	0,2070,4320,5447,
#Deleted in new
chr1	83911235	83912980	chr1:83911235-83912980	0	-	83911235	83911235	8553170	2	128,48,	0,1697,
#Partially deleted in new
chr1	83912995	83999150	chr1:83912995-83999150	1	-	83912995	83952211	789624	15	45,87,136,74,148,95,159,165,217,159,68,122,132,201,220,	0,4608,6703,8091,8251,16140,20612,24856,29467,34128,35632,36869,38849,39191,85935,
#Partially deleted in new
chr1	83917685	83999025	chr1:83917685-83999025	0	-	83917685	83917685	8553170	6	5,136,74,148,95,95,	0,2013,3401,3561,11450,81245,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	83949312	83951927	chr1:83949312-83951927	0	-	83949312	83949312	8553170	2	674,83,	0,2532,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	83979117	83984300	chr1:83979117-83984300	3	-	83979117	83979117	8553170	2	2452,469,	0,4714,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	84015864	84018371	chr1:84015864-84018371	7	-	84015864	84015864	16724991	5	161,361,483,213,183,	0,434,1129,1821,2324,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	84038528	84065031	chr1:84038528-84065031	3	+	84038528	84038528	8553170	2	101,340,	0,26163,
#Deleted in new
chr1	84076330	84077931	chr1:84076330-84077931	3	-	84076330	84076330	8553170	1	1601,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	84078061	84238498	chr1:84078061-84238498	1	+	84078325	84235305	789624	10	310,62,129,99,83,127,96,123,165,3319,	0,101115,104138,105975,107038,118554,119667,124621,136091,157118,
#Partially deleted in new
chr1	84078143	84205439	chr1:84078143-84205439	1	+	84078325	84204490	789624	9	228,62,129,99,83,127,96,123,958,	0,101033,104056,105893,106956,118472,119585,124539,126338,
#Deleted in new
chr1	84085740	84086233	chr1:84085740-84086233	7	+	84085740	84085740	16724991	1	493,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	84144270	84238498	chr1:84144270-84238498	3	+	84144361	84235305	789624	10	278,62,129,99,83,127,96,123,165,3319,	0,34906,37929,39766,40829,52345,53458,58412,69882,90909,
#Partially deleted in new
chr1	84144321	84196696	chr1:84144321-84196696	0	+	84144321	84144321	8553170	7	227,71,62,129,99,83,81,	0,13013,34855,37878,39715,40778,52294,
#Partially deleted in new
chr1	84164316	84204525	chr1:84164316-84204525	1	+	84164412	84204490	789624	9	106,62,129,99,83,127,96,123,44,	0,14860,17883,19720,20783,32299,33412,38366,40165,
#Partially deleted in new
chr1	84164322	84196742	chr1:84164322-84196742	0	+	84164412	84196742	789624	8	100,24,24,62,129,99,83,127,	0,9006,10710,14854,17877,19714,20777,32293,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	84164381	84238494	chr1:84164381-84238494	1	+	84164412	84235305	789624	12	41,24,24,62,129,99,83,127,96,123,165,3315,	0,8947,10651,14795,17818,19655,20718,32234,33347,38301,49771,70798,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	84164381	84238494	chr1:84164381-84238494	1	+	84164412	84235305	789624	13	41,24,24,5,63,129,99,83,127,96,123,165,3315,	0,8947,10651,14787,14794,17818,19655,20718,32234,33347,38301,49771,70798,
#Partially deleted in new
chr1	84164381	84235309	chr1:84164381-84235309	1	+	84164412	84235305	789624	13	41,24,24,9,62,129,99,83,127,96,123,165,130,	0,8947,10651,11417,14795,17818,19655,20718,32234,33347,38301,49771,70798,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	84164381	84238494	chr1:84164381-84238494	1	+	84164412	84235305	789624	10	41,62,129,99,83,127,96,123,165,3315,	0,14795,17818,19655,20718,32234,33347,38301,49771,70798,
#Partially deleted in new
chr1	84164393	84202695	chr1:84164393-84202695	0	+	84164412	84202695	789624	9	29,24,62,129,99,83,127,96,13,	0,10639,14783,17806,19643,20706,32222,33335,38289,
#Partially deleted in new
chr1	84164680	84197791	chr1:84164680-84197791	0	+	84165006	84197791	789624	9	333,24,24,62,129,99,83,127,63,	0,8648,10352,14496,17519,19356,20419,31935,33048,
#Partially deleted in new
chr1	84164694	84205297	chr1:84164694-84205297	1	+	84165006	84204490	789624	12	319,24,24,9,62,129,99,83,127,96,123,819,	0,8634,10338,11104,14482,17505,19342,20405,31921,33034,37988,39784,
#Partially deleted in new
chr1	84164903	84197824	chr1:84164903-84197824	0	+	84165006	84197824	789624	8	110,24,62,129,99,83,127,96,	0,10129,14273,17296,19133,20196,31712,32825,
#Partially deleted in new
chr1	84164911	84197812	chr1:84164911-84197812	0	+	84165006	84197812	789624	7	102,62,129,99,83,127,84,	0,14265,17288,19125,20188,31704,32817,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	84164965	84238498	chr1:84164965-84238498	1	+	84165006	84235305	789624	11	48,24,24,62,129,83,127,96,123,165,3319,	0,8363,10067,14211,17234,20134,31650,32763,37717,49187,70214,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	84164965	84238496	chr1:84164965-84238496	1	+	84165006	84235305	789624	13	48,24,24,9,62,129,99,83,127,96,123,165,3317,	0,8363,10067,10833,14211,17234,19071,20134,31650,32763,37717,49187,70214,
#Partially deleted in new
chr1	84178834	84184046	chr1:84178834-84184046	0	+	84178834	84178834	8553170	3	404,129,10,	0,3365,5202,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	84181659	84238494	chr1:84181659-84238494	1	+	84181659	84235305	789624	9	69,129,99,83,127,96,123,165,3315,	0,540,2377,3440,14956,16069,21023,32493,53520,
#Deleted in new
chr1	84244333	84244577	chr1:84244333-84244577	7	+	84244333	84244333	16724991	1	244,	0,
#Deleted in new
chr1	84277320	84277457	chr1:84277320-84277457	3	+	84277320	84277320	8553170	1	137,	0,
#Partially deleted in new
chr1	84298365	84350798	chr1:84298365-84350798	1	+	84298557	84349774	789624	4	202,85,112,1168,	0,4837,27271,51265,
#Partially deleted in new
chr1	84299557	84350070	chr1:84299557-84350070	1	+	84299616	84349774	789624	4	87,85,112,440,	0,3645,26079,50073,
#Partially deleted in new
chr1	84301605	84350022	chr1:84301605-84350022	3	+	84303234	84349774	789624	4	196,85,112,392,	0,1597,24031,48025,
#Deleted in new
chr1	84301655	84304278	chr1:84301655-84304278	0	+	84301655	84301655	8553170	2	146,1076,	0,1547,
#Partially deleted in new
chr1	84301719	84349994	chr1:84301719-84349994	1	+	84303234	84349774	789624	4	295,85,112,364,	0,1483,23917,47911,
#Deleted in new
chr1	84301722	84303888	chr1:84301722-84303888	0	+	84301722	84301722	8553170	2	292,686,	0,1480,
#Partially deleted in new
chr1	84302650	84350796	chr1:84302650-84350796	1	+	84303234	84349774	789624	4	40,85,112,1166,	0,552,22986,46980,
#Partially deleted in new
chr1	84303032	84349930	chr1:84303032-84349930	1	+	84303234	84349774	789624	4	68,85,112,300,	0,170,22604,46598,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	84325679	84389957	chr1:84325679-84389957	0	+	84325679	84388363	789624	3	69,114,179,	0,62600,64099,
#Partially deleted in new
chr1	84344677	84349939	chr1:84344677-84349939	5	+	84344677	84344677	16724991	2	596,309,	0,4953,
#Partially deleted in new
chr1	84344677	84349939	chr1:84344677-84349939	7	+	84344677	84344677	16724991	2	293,309,	0,4953,
#Partially deleted in new
chr1	84344677	84349661	chr1:84344677-84349661	5	+	84344677	84344677	16724991	2	596,31,	0,4953,
#Partially deleted in new
chr1	84363705	84370400	chr1:84363705-84370400	5	-	84363705	84363705	16724991	4	311,91,124,18,	0,3944,6198,6677,
#Partially deleted in new
chr1	84364388	84381891	chr1:84364388-84381891	4	-	84364388	84364388	16724991	6	1107,93,91,124,187,78,	0,1200,3261,5515,7653,17425,
#Deleted in new
chr1	84364957	84365841	chr1:84364957-84365841	4	-	84364957	84364957	16724991	3	538,93,33,	0,631,851,
#Partially deleted in new
chr1	84365427	84397831	chr1:84365427-84397831	7	-	84365427	84365427	16724991	8	70,88,118,187,79,115,214,28,	0,2229,4482,6615,16386,16566,19170,32376,
#Partially deleted in new
chr1	84367660	84384801	chr1:84367660-84384801	4	-	84367660	84367660	16724991	5	80,124,187,79,209,	0,2243,4381,14153,16932,
#Partially deleted in new
chr1	84398531	84415018	chr1:84398531-84415018	3	+	84398564	84414868	789624	6	158,178,82,162,198,491,	0,3369,9905,12306,13817,15996,
#Deleted in new
chr1	84408229	84415008	chr1:84408229-84415008	1	+	84412425	84414868	789624	4	289,162,198,481,	0,2608,4119,6298,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	84477038	84479157	chr1:84477038-84479157	3	+	84477038	84477038	8553170	2	1027,291,	0,1828,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	84479258	84483330	chr1:84479258-84483330	1	+	84479281	84483019	789624	3	251,57,416,	0,1697,3656,
#Partially deleted in new
chr1	84479266	84497790	chr1:84479266-84497790	3	+	84479281	84497470	789624	9	243,57,81,96,154,83,182,127,362,	0,1689,3648,10366,11052,16106,16615,16977,18162,
#Partially deleted in new
chr1	84498324	84506565	chr1:84498324-84506565	3	-	84501844	84506091	789624	4	224,145,291,130,	0,3501,7686,8111,
#Partially deleted in new
chr1	84498324	84503833	chr1:84498324-84503833	0	-	84498324	84498324	8553170	3	224,145,188,	0,3501,5321,
#Partially deleted in new
chr1	84498328	84506565	chr1:84498328-84506565	1	-	84501844	84506091	789624	3	220,145,555,	0,3497,7682,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	84498349	84556688	chr1:84498349-84556688	3	-	84498349	84498349	8553170	3	199,145,2342,	0,3476,55997,
#Deleted in new
chr1	84506299	84507320	chr1:84506299-84507320	0	+	84506299	84506299	8553170	2	119,444,	0,577,
#Deleted in new
chr1	84506381	84507001	chr1:84506381-84507001	0	+	84506381	84506381	8553170	2	37,346,	0,274,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	84506396	84554539	chr1:84506396-84554539	3	+	84516293	84553124	789624	13	22,173,107,118,54,229,115,58,103,126,179,99,1505,	0,9826,14188,15993,19299,19448,26463,27312,37805,39237,42389,44035,46638,
#Partially deleted in new
chr1	84520114	84526076	chr1:84520114-84526076	0	+	84520114	84520114	8553170	5	139,107,118,54,232,	0,470,2275,5581,5730,
#Partially deleted in new
chr1	84522417	84527653	chr1:84522417-84527653	0	+	84522417	84522417	8553170	4	90,54,229,84,	0,3278,3427,5152,
#Partially deleted in new
chr1	84544201	84566194	chr1:84544201-84566194	0	+	84544201	84544201	8553170	5	103,179,90,70,334,	0,4584,8833,11708,21659,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	84549605	84574464	chr1:84549605-84574464	3	-	84554998	84574415	789624	7	5594,162,98,172,209,139,226,	0,13651,14129,16235,20325,20976,24633,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	84553120	84574480	chr1:84553120-84574480	0	-	84553120	84553120	8553170	6	2079,162,98,172,139,242,	0,10136,10614,12720,17461,21118,
#Partially deleted in new
chr1	84554537	84574430	chr1:84554537-84574430	0	-	84574181	84574415	789624	6	662,162,98,172,139,515,	0,8719,9197,11303,16044,19378,
#Partially deleted in new
chr1	84554852	84574421	chr1:84554852-84574421	0	-	84574181	84574415	789624	7	347,162,98,172,209,139,506,	0,8404,8882,10988,15078,15729,19063,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	84574128	84583620	chr1:84574128-84583620	3	+	84574128	84574128	8553170	3	295,117,681,	0,3890,8811,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	84574584	84583616	chr1:84574584-84583616	0	+	84574584	84574584	8553170	3	90,117,677,	0,3434,8355,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	84628229	84635020	chr1:84628229-84635020	3	-	84628229	84628229	789624	3	2658,137,89,	0,3380,6702,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	84636157	84637106	chr1:84636157-84637106	7	-	84636157	84636157	16724991	2	101,146,	0,803,
#Partially deleted in new
chr1	84643706	84690545	chr1:84643706-84690545	3	-	84647432	84671219	789624	14	3901,166,115,174,137,151,178,76,136,111,213,170,132,175,	0,6655,8176,12125,12641,14611,18491,18748,20710,22415,25974,26939,27470,46664,
#Partially deleted in new
chr1	84643706	84690468	chr1:84643706-84690468	1	-	84647432	84670777	789624	13	3901,166,115,174,137,151,178,76,136,111,213,170,315,	0,6655,8176,12125,12641,14611,18491,18748,20710,22415,25974,26939,46447,
#Partially deleted in new
chr1	84647338	84690304	chr1:84647338-84690304	0	-	84649935	84671219	789624	15	269,278,166,115,174,137,151,178,76,136,111,213,170,132,151,	0,2332,3023,4544,8493,9009,10979,14859,15116,17078,18783,22342,23307,23838,42815,
#Partially deleted in new
chr1	84647340	84690757	chr1:84647340-84690757	0	-	84651983	84671219	789624	16	267,166,115,124,174,137,151,178,76,136,111,213,170,120,50,84,	0,3021,4542,8124,8491,9007,10977,14857,15114,17076,18781,22340,23305,23848,32997,43333,
#Partially deleted in new
chr1	84647375	84690444	chr1:84647375-84690444	1	-	84647432	84670777	789624	13	232,166,115,174,137,151,178,76,136,111,213,170,74,	0,2986,4507,8456,8972,10942,14822,15079,17041,18746,22305,23270,42995,
#Partially deleted in new
chr1	84649629	84690289	chr1:84649629-84690289	1	-	84650324	84651943	789624	3	898,115,136,	0,2253,40524,
#Partially deleted in new
chr1	84650370	84652441	chr1:84650370-84652441	0	-	84650370	84650370	8553170	2	157,559,	0,1512,
#Deleted in new
chr1	84655317	84656013	chr1:84655317-84656013	0	-	84655317	84655317	8553170	2	271,182,	0,514,
#Partially deleted in new
chr1	84658206	84671315	chr1:84658206-84671315	0	-	84658206	84658206	8553170	6	262,333,136,111,1135,139,	0,3991,6210,7915,11474,12970,
#Partially deleted in new
chr1	84666118	84690803	chr1:84666118-84690803	0	-	84666118	84671219	789624	5	114,213,170,132,130,	0,3562,4527,5058,24555,
#Deleted in new
chr1	84785426	84786714	chr1:84785426-84786714	3	+	84785426	84785426	8553170	2	302,870,	0,418,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	84811601	84866159	chr1:84811601-84866159	1	-	84813845	84866120	789624	2	2570,775,	0,53783,
#Partially deleted in new
chr1	84813403	84893213	chr1:84813403-84893213	3	-	84813845	84866120	789624	3	768,754,198,	0,51981,79612,
#Partially deleted in new
chr1	84813915	84866144	chr1:84813915-84866144	0	-	84813915	84813915	8553170	3	256,159,456,	0,51469,51773,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	84925582	84996940	chr1:84925582-84996940	1	-	84926684	84996872	789624	14	1139,122,207,123,102,150,113,100,97,85,154,174,160,145,	0,3975,5779,12172,12398,13970,15296,21450,26660,26863,30848,32946,39966,71213,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	84925907	84997113	chr1:84925907-84997113	0	-	84947076	84996872	789624	12	814,122,207,123,102,47,97,85,154,174,160,318,	0,3650,5454,11847,12073,21125,26335,26538,30523,32621,39641,70888,
#Partially deleted in new
chr1	84926425	84929844	chr1:84926425-84929844	0	-	84926425	84926425	8553170	2	296,287,	0,3132,
#Partially deleted in new
chr1	84926684	84997112	chr1:84926684-84997112	3	-	84926684	84965701	789624	14	37,122,207,123,102,150,113,100,97,85,154,174,160,105,	0,2873,4677,11070,11296,12868,14194,20348,25558,25761,29746,31844,38864,70323,
#Partially deleted in new
chr1	84937459	84997113	chr1:84937459-84997113	0	-	84937459	84937459	8553170	12	134,123,102,150,113,100,97,85,154,174,160,318,	0,295,521,2093,3419,9573,14783,14986,18971,21069,28089,59336,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	84965548	84997113	chr1:84965548-84997113	0	-	84965548	84965548	8553170	3	160,99,318,	0,6387,31247,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr1	84999146	85133138	chr1:84999146-85133138	1	+	85071941	85132998	789624	22	192,78,39,182,105,150,200,191,125,90,87,129,74,145,88,131,64,131,205,92,123,284,	0,72781,73907,82087,83153,85399,86684,94311,95284,96784,98422,99383,105377,108886,110901,118582,122604,124974,127364,129561,130843,133708,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	85018081	85048446	chr1:85018081-85048446	3	-	85019122	85045360	0	13	1176,207,123,102,150,113,100,97,85,154,168,230,51,	0,2988,3988,4217,7857,8090,11024,14614,14790,16016,22928,27051,30314,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	85018082	85023520	chr1:85018082-85023520	0	-	85018082	85018082	8553170	4	1175,207,123,1222,	0,2987,3987,4216,
#Partially deleted in new
chr1	85018907	85048446	chr1:85018907-85048446	1	-	85019122	85045360	0	12	350,207,123,102,150,113,100,97,85,154,230,51,	0,2162,3162,3391,7031,7264,10198,13788,13964,15190,26225,29488,
#Partially deleted in new
chr1	85024540	85048470	chr1:85024540-85048470	1	-	85026150	85045360	789624	9	1744,100,97,85,154,168,230,300,75,	0,4565,8155,8331,9557,16469,20592,22769,23855,
#Partially deleted in new
chr1	85024556	85048499	chr1:85024556-85048499	0	-	85036838	85045360	789624	11	1532,113,100,97,85,154,159,168,230,35,104,	0,1615,4549,8139,8315,9541,12153,16453,20576,23018,23839,
#Partially deleted in new
chr1	85024823	85029959	chr1:85024823-85029959	0	-	85024823	85024823	8553170	3	1265,113,854,	0,1348,4282,
#Partially deleted in new
chr1	85062311	85133138	chr1:85062311-85133138	1	+	85071941	85132998	789624	22	175,78,39,182,105,150,200,191,125,90,87,129,74,145,88,131,64,131,205,92,123,284,	0,9616,10742,18922,19988,22234,23519,31146,32119,33619,35257,36218,42212,45721,47736,55417,59439,61809,64199,66396,67678,70543,
#Partially deleted in new
chr1	85062320	85133137	chr1:85062320-85133137	3	+	85071941	85132998	789624	23	166,78,39,182,105,150,200,117,191,125,90,87,129,74,145,88,131,64,131,205,92,123,283,	0,9607,10733,18913,19979,22225,23510,27795,31137,32110,33610,35248,36209,42203,45712,47727,55408,59430,61800,64190,66387,67669,70534,
#Partially deleted in new
chr1	85062326	85084568	chr1:85062326-85084568	0	+	85071941	85084568	789624	5	160,78,182,105,23,	0,9601,18907,19973,22219,
#Partially deleted in new
chr1	85062385	85133027	chr1:85062385-85133027	0	+	85071941	85093832	789624	23	101,78,39,182,105,150,200,117,191,782,90,87,129,74,145,88,131,64,131,205,92,123,173,	0,9542,10668,18848,19914,22160,23445,27730,31072,31388,33545,35183,36144,42138,45647,47662,55343,59365,61735,64125,66322,67604,70469,
#Partially deleted in new
chr1	85126552	85130181	chr1:85126552-85130181	0	+	85126552	85130121	789624	3	163,92,192,	0,2155,3437,
#Deleted in new
chr1	85133793	85133873	chr1:85133793-85133873	3	+	85133793	85133793	5263520	1	80,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	85152486	85154203	chr1:85152486-85154203	3	-	85152486	85152486	8553170	1	1717,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	85156872	85201046	chr1:85156872-85201046	3	-	85158749	85200996	789624	7	2377,232,182,127,1103,696,795,	0,7653,12171,21273,25225,33184,43379,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	85181158	85200513	chr1:85181158-85200513	0	-	85181158	85181158	8553170	3	2042,696,262,	0,8898,19093,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	85249952	85259672	chr1:85249952-85259672	0	-	85249952	85249952	789624	4	2750,199,127,315,	0,8571,8982,9405,
#Partially deleted in new
chr1	85251967	85259642	chr1:85251967-85259642	3	-	85252628	85259633	789624	3	735,199,285,	0,6556,7390,
#Partially deleted in new
chr1	85257442	85259633	chr1:85257442-85259633	1	-	85257442	85259633	789624	3	29,199,276,	0,1081,1915,
#Partially deleted in new
chr1	85257442	85259633	chr1:85257442-85259633	0	-	85257442	85257442	8553170	4	29,199,127,276,	0,1081,1492,1915,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	85264295	85264402	chr1:85264295-85264402	3	+	85264295	85264295	8553170	1	107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	85265775	85276904	chr1:85265775-85276904	3	-	85267626	85276352	0	3	2207,289,609,	0,4842,10520,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	85265775	85276632	chr1:85265775-85276632	1	-	85267626	85276352	8553170	3	2207,289,337,	0,4842,10520,
#Partially deleted in new
chr1	85267623	85276456	chr1:85267623-85276456	1	-	85267626	85276352	789624	3	326,289,161,	0,2994,8672,
#Partially deleted in new
chr1	85267728	85275750	chr1:85267728-85275750	0	-	85267728	85267728	8553170	3	254,289,588,	0,2889,7434,
#Partially deleted in new
chr1	85270805	85276403	chr1:85270805-85276403	0	-	85276109	85276352	8553170	2	101,1460,	0,4138,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	85276714	85399963	chr1:85276714-85399963	3	+	85276714	85276714	8553170	5	83,98,70,192,1507,	0,926,100051,103659,121742,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	85277671	85448124	chr1:85277671-85448124	0	+	85277671	85277671	8553170	3	67,70,327,	0,99094,170126,
#Partially deleted in new
chr1	85318480	85578250	chr1:85318480-85578250	1	-	85321451	85358841	0	7	3088,144,120,74,100,116,267,	0,6259,31934,33025,40267,177685,259503,
#Partially deleted in new
chr1	85318484	85465140	chr1:85318484-85465140	3	-	85321451	85465045	0	6	3084,144,120,74,100,398,	0,6255,31930,33021,40263,146258,
#Partially deleted in new
chr1	85318484	85578250	chr1:85318484-85578250	0	-	85318484	85318484	8553170	7	3084,144,120,74,100,116,267,	0,6255,31930,33021,40263,177681,259499,
#Partially deleted in new
chr1	85318485	85578363	chr1:85318485-85578363	1	-	85321451	85358841	0	7	3083,144,120,74,100,116,380,	0,6254,31929,33020,40262,177680,259498,
#Partially deleted in new
chr1	85321451	85404528	chr1:85321451-85404528	1	-	85321451	85404383	789624	6	117,144,120,74,100,148,	0,3288,28963,30054,37296,82929,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	85467294	85467660	chr1:85467294-85467660	3	+	85467294	85467294	8553170	1	366,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	85482280	85496281	chr1:85482280-85496281	0	-	85482280	85482280	8553170	3	244,100,116,	0,6010,13885,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	85488298	85578250	chr1:85488298-85578250	3	-	85488298	85488298	8553170	4	92,33,116,267,	0,6430,7867,89685,
#Partially deleted in new
chr1	85493416	85578150	chr1:85493416-85578150	1	-	85493416	85493416	8553170	3	2462,116,167,	0,2749,84567,
#Partially deleted in new
chr1	85495430	85521810	chr1:85495430-85521810	0	-	85495430	85495430	8553170	2	374,143,	0,26237,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	85495738	85576858	chr1:85495738-85576858	1	-	85495738	85495738	8553170	4	140,116,73,202,	0,427,80093,80918,
#Deleted in new
chr1	85578499	85578742	chr1:85578499-85578742	3	-	85578499	85578499	8553170	1	243,	0,
#Deleted in new
chr1	85580760	85583962	chr1:85580760-85583962	3	+	85580984	85583042	0	5	287,214,357,209,1223,	0,604,1167,1655,1979,
#Deleted in new
chr1	85581199	85582099	chr1:85581199-85582099	0	+	85581199	85581199	8553170	2	379,172,	0,728,
#Partially deleted in new
chr1	85592279	85592356	chr1:85592279-85592356	3	+	85592279	85592279	8553170	1	77,	0,
#Partially deleted in new
chr1	85599130	85600734	chr1:85599130-85600734	3	+	85599130	85599130	8553170	2	101,154,	0,1450,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	85649422	85708433	chr1:85649422-85708433	1	-	85654057	85708284	789624	11	4676,125,78,81,69,104,86,107,66,308,380,	0,8424,27813,29278,31413,52734,56655,56826,57019,58206,58631,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	85652807	85708418	chr1:85652807-85708418	3	-	85654057	85708284	789624	10	1291,125,78,81,69,104,86,107,66,790,	0,5039,24428,25893,28028,49349,53270,53441,53634,54821,
#Partially deleted in new
chr1	85729232	86156763	chr1:85729232-86156763	3	-	85730545	86156396	789624	60	1460,216,110,169,66,27,36,36,54,63,54,108,108,108,54,54,54,54,57,54,54,108,54,108,54,54,54,54,54,45,45,54,54,54,54,54,45,54,45,54,54,54,54,54,45,54,45,54,45,54,45,54,45,54,54,54,54,1370,65,423,	0,5516,8163,15433,16208,32163,32298,46441,51987,54263,54880,55026,57121,87555,88801,94303,94452,109352,111989,112835,113107,118432,120120,139286,139549,145416,146044,147889,160327,166625,166788,167123,177961,179365,180717,182147,232016,235776,240994,242107,258368,287918,293007,293305,293600,293721,302645,304637,317592,320891,328698,329888,334482,359941,363034,383334,386092,395612,416886,427108,
#Partially deleted in new
chr1	85734788	85744749	chr1:85734788-85744749	0	-	85736253	85744749	789624	4	176,414,110,84,	0,1357,2607,9877,
#Deleted in new
chr1	85883679	85883798	chr1:85883679-85883798	7	-	85883679	85883679	16724991	1	119,	0,
#Deleted in new
chr1	86029853	86030589	chr1:86029853-86030589	7	+	86029853	86029853	16724991	1	736,	0,
#Partially deleted in new
chr1	86126091	86156943	chr1:86126091-86156943	0	-	86126091	86156396	789624	4	123,65,131,47,	0,20027,30249,30805,
#Deleted in new
chr1	86154072	86156772	chr1:86154072-86156772	0	-	86154072	86154072	8553170	3	2150,131,95,	0,2268,2605,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	86288703	86320711	chr1:86288703-86320711	3	-	86288703	86288703	8553170	5	436,137,144,64,2056,	0,24860,26900,29628,29952,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	86288878	86320186	chr1:86288878-86320186	0	-	86288878	86288878	8553170	4	261,137,64,1531,	0,24685,29453,29777,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	86346823	86396262	chr1:86346823-86396262	1	-	86352190	86387027	789624	18	5385,126,163,86,159,105,111,87,136,110,186,117,72,63,126,133,165,230,	0,6035,7706,7950,9620,11963,13602,21812,24194,25607,29409,35418,36107,36310,37852,38634,40091,49209,
#Partially deleted in new
chr1	86348736	86383196	chr1:86348736-86383196	0	-	86348749	86383196	789624	13	142,126,163,86,159,105,111,136,110,186,117,72,63,	0,4122,5793,6037,7707,10050,11689,22281,23694,27496,33505,34194,34397,
#Partially deleted in new
chr1	86348737	86396340	chr1:86348737-86396340	1	-	86348749	86387027	789624	16	141,126,163,86,105,111,136,110,186,117,72,63,126,133,172,308,	0,4121,5792,6036,10049,11688,22280,23693,27495,33504,34193,34396,35938,36720,38177,47295,
#Partially deleted in new
chr1	86348831	86355383	chr1:86348831-86355383	0	-	86348831	86355383	789624	5	47,126,163,86,39,	0,4027,5698,5942,6513,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	86350093	86396280	chr1:86350093-86396280	3	-	86352190	86387027	789624	18	2115,126,163,86,39,159,105,111,136,110,186,117,72,63,126,133,172,248,	0,2765,4436,4680,5251,6350,8693,10332,20924,22337,26139,32148,32837,33040,34582,35364,36821,45939,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	86350094	86396342	chr1:86350094-86396342	1	-	86352190	86387027	789624	18	2114,126,163,86,159,105,111,87,136,110,186,117,72,63,126,133,172,310,	0,2764,4435,4679,6349,8692,10331,18541,20923,22336,26138,32147,32836,33039,34581,35363,36820,45938,
#Deleted in new
chr1	86352858	86356544	chr1:86352858-86356544	0	-	86354854	86356544	789624	6	126,163,86,44,14,101,	0,1671,1915,2486,3135,3585,
#Partially deleted in new
chr1	86352901	86360812	chr1:86352901-86360812	0	-	86352901	86352901	8553170	5	83,163,86,105,387,	0,1628,1872,5885,7524,
#Deleted in new
chr1	86352919	86355317	chr1:86352919-86355317	0	-	86352919	86352919	8553170	3	65,163,544,	0,1610,1854,
#Partially deleted in new
chr1	86356461	86375000	chr1:86356461-86375000	0	-	86356461	86356461	8553170	6	141,105,111,136,110,78,	0,2325,3964,14556,15969,18461,
#Partially deleted in new
chr1	86356575	86360921	chr1:86356575-86360921	0	-	86356575	86356575	8553170	3	27,105,496,	0,2211,3850,
#Deleted in new
chr1	86357631	86357687	chr1:86357631-86357687	3	-	86357631	86357631	5263520	1	56,	0,
#Partially deleted in new
chr1	86357939	86360536	chr1:86357939-86360536	0	-	86357939	86357939	8553170	3	166,105,111,	0,847,2486,
#Partially deleted in new
chr1	86358343	86371056	chr1:86358343-86371056	0	-	86358343	86358343	8553170	3	548,111,39,	0,2082,12674,
#Partially deleted in new
chr1	86358786	86383079	chr1:86358786-86383079	0	-	86358786	86358786	8553170	6	105,111,136,110,186,149,	0,1639,12231,13644,17446,24144,
#Partially deleted in new
chr1	86358816	86396286	chr1:86358816-86396286	0	-	86384782	86387027	789624	11	75,111,136,110,186,117,72,63,126,172,254,	0,1609,12201,13614,17416,23425,24114,24317,25859,28098,37216,
#Partially deleted in new
chr1	86358818	86396283	chr1:86358818-86396283	0	-	86358818	86383175	789624	8	73,111,136,110,186,72,63,251,	0,1607,12199,13612,17414,24112,24315,37214,
#Partially deleted in new
chr1	86360431	86372581	chr1:86360431-86372581	0	-	86360431	86360431	8553170	3	105,136,151,	0,10586,11999,
#Partially deleted in new
chr1	86371055	86383104	chr1:86371055-86383104	0	-	86371055	86371055	8553170	5	98,110,186,117,174,	0,1375,5177,11186,11875,
#Deleted in new
chr1	86381941	86385544	chr1:86381941-86385544	0	-	86381941	86381941	8553170	5	417,72,63,126,87,	0,989,1192,2734,3516,
#Partially deleted in new
chr1	86382325	86396253	chr1:86382325-86396253	0	-	86382325	86383175	789624	6	33,72,63,126,133,221,	0,605,808,2350,3132,13707,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	86385727	86396323	chr1:86385727-86396323	1	-	86386844	86387027	789624	2	1359,291,	0,10305,
#Partially deleted in new
chr1	86386808	86395977	chr1:86386808-86395977	1	-	86386844	86387027	789624	2	278,33,	0,9136,
#Partially deleted in new
chr1	86404175	86404866	chr1:86404175-86404866	7	-	86404175	86404175	16724991	1	691,	0,
#Partially deleted in new
chr1	86424085	86456558	chr1:86424085-86456558	3	+	86424247	86455527	789624	14	348,138,151,109,160,228,231,178,107,225,271,171,234,1474,	0,1253,4332,6776,8283,10432,14790,16062,17351,19701,23422,26477,29283,30999,
#Partially deleted in new
chr1	86440279	86445519	chr1:86440279-86445519	0	+	86440279	86440279	8553170	4	46,107,225,136,	0,1157,3507,5104,
#Partially deleted in new
chr1	86448133	86453602	chr1:86448133-86453602	0	+	86448133	86448133	8553170	3	335,171,234,	0,2429,5235,
#Partially deleted in new
chr1	86468367	86500259	chr1:86468367-86500259	3	+	86468971	86500045	789624	15	91,422,141,148,106,178,219,228,175,107,216,262,171,240,606,	0,344,5049,5361,8080,13837,16975,18158,20628,22897,25016,25819,27137,30204,31286,
#Partially deleted in new
chr1	86468842	86500289	chr1:86468842-86500289	1	+	86468971	86500045	789624	14	291,141,148,106,178,219,228,175,107,216,262,171,240,636,	0,4574,4886,7605,13362,16500,17683,20153,22422,24541,25344,26662,29729,30811,
#Partially deleted in new
chr1	86547077	86580754	chr1:86547077-86580754	3	+	86547119	86580345	789624	14	201,141,148,109,178,219,228,178,107,216,268,171,234,813,	0,12854,13133,16583,18196,18724,20346,23999,25536,27462,28254,30824,32276,32864,
#Deleted in new
chr1	86552624	86553342	chr1:86552624-86553342	7	-	86552624	86552624	16724991	1	718,	0,
#Deleted in new
chr1	86571115	86572956	chr1:86571115-86572956	0	+	86571115	86571115	8553170	2	139,343,	0,1498,
#Partially deleted in new
chr1	86634272	86651666	chr1:86634272-86651666	5	+	86634272	86634272	16724991	14	180,141,148,109,178,225,225,178,101,224,271,165,240,22,	0,1327,1683,2527,4585,8271,9592,11704,13044,13507,14032,14861,15885,17372,
#Partially deleted in new
chr1	86634275	86655376	chr1:86634275-86655376	7	+	86634275	86634275	16724991	15	177,141,148,109,178,225,225,178,60,101,224,271,165,240,970,	0,1324,1680,2524,4582,8268,9589,11701,12887,13041,13504,14029,14858,15882,20131,
#Partially deleted in new
chr1	86634275	86654745	chr1:86634275-86654745	5	+	86634275	86634275	16724991	15	177,141,148,109,178,225,225,178,60,101,224,271,165,240,339,	0,1324,1680,2524,4582,8268,9589,11701,12887,13041,13504,14029,14858,15882,20131,
#Deleted in new
chr1	86703501	86704462	chr1:86703501-86704462	3	-	86703501	86703501	789624	1	961,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	86704569	86748176	chr1:86704569-86748176	1	+	86719592	86743235	789624	8	402,129,134,93,90,101,229,5049,	0,14937,17970,19743,30032,30509,37638,38558,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	86704569	86748176	chr1:86704569-86748176	1	+	86704899	86743235	789624	10	402,142,129,134,93,87,90,101,229,5049,	0,11154,14937,17970,19743,23833,30032,30509,37638,38558,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	86704575	86748184	chr1:86704575-86748184	3	+	86704899	86743235	789624	9	396,142,129,134,93,90,101,229,5057,	0,11148,14931,17964,19737,30026,30503,37632,38552,
#Partially deleted in new
chr1	86704894	86743268	chr1:86704894-86743268	1	+	86704899	86743235	789624	11	77,142,129,134,93,39,24,90,101,229,141,	0,10829,14612,17645,19418,23508,25193,29707,30184,37313,38233,
#Partially deleted in new
chr1	86734243	86738695	chr1:86734243-86738695	0	+	86734243	86734243	8553170	3	448,101,35,	0,835,4417,
#Deleted in new
chr1	86784912	86785467	chr1:86784912-86785467	7	+	86784912	86784912	16724991	1	555,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	86821557	86834169	chr1:86821557-86834169	3	-	86821557	86821557	8553170	3	1452,101,85,	0,10852,12527,
#Partially deleted in new
chr1	86862444	86914365	chr1:86862444-86914365	3	-	86863473	86914111	789624	5	1161,50,64,168,338,	0,5608,18217,40836,51583,
#Partially deleted in new
chr1	86862446	86914424	chr1:86862446-86914424	1	-	86863546	86914111	789624	5	1159,28,33,168,397,	0,18215,18246,40834,51581,
#Partially deleted in new
chr1	86862446	86914424	chr1:86862446-86914424	1	-	86863473	86914111	789624	6	1159,50,28,33,168,397,	0,5606,18215,18246,40834,51581,
#Partially deleted in new
chr1	86862724	86914134	chr1:86862724-86914134	1	-	86863546	86914111	789624	4	881,64,168,107,	0,17937,40556,51303,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	86862826	86914370	chr1:86862826-86914370	0	-	86866154	86914111	8553170	6	779,98,50,64,168,343,	0,3245,5226,17835,40454,51201,
#Partially deleted in new
chr1	86863166	86914424	chr1:86863166-86914424	0	-	86863166	86863166	8553170	5	439,50,64,168,110,	0,4886,17495,40114,51148,
#Partially deleted in new
chr1	86863300	86914126	chr1:86863300-86914126	1	-	86863577	86914111	789624	6	305,50,64,41,168,99,	0,4752,17361,23855,39980,50727,
#Partially deleted in new
chr1	86863516	86903352	chr1:86863516-86903352	0	-	86863516	86903352	789624	4	89,64,41,72,	0,17145,23639,39764,
#Partially deleted in new
chr1	86868095	86914065	chr1:86868095-86914065	0	-	86913970	86914065	789624	4	7,64,168,260,	0,12566,35185,45710,
#Partially deleted in new
chr1	86914647	87098445	chr1:86914647-87098445	1	+	86915036	87097939	789624	5	513,239,86,139,608,	0,158286,169546,177883,183190,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	86914673	87109998	chr1:86914673-87109998	3	+	86915036	87104696	789624	7	487,239,86,139,98,158,5529,	0,158260,169520,177857,183164,188758,189796,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	86932198	86934891	chr1:86932198-86934891	3	-	86932198	86932198	8553170	2	266,480,	0,2213,
#Partially deleted in new
chr1	86993008	87169204	chr1:86993008-87169204	3	+	86993081	87168176	8553170	8	119,239,86,139,98,158,105,1069,	0,79925,91185,99522,104829,110423,140605,175127,
#Deleted in new
chr1	87044934	87045871	chr1:87044934-87045871	7	-	87044934	87044934	16724991	1	937,	0,
#Deleted in new
chr1	87045874	87046700	chr1:87045874-87046700	7	+	87045874	87045874	16724991	1	826,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	87129764	87168505	chr1:87129764-87168505	3	+	87129764	87129764	8553170	4	230,105,593,370,	0,3849,35624,38371,
#Partially deleted in new
chr1	87129773	87169198	chr1:87129773-87169198	0	+	87129773	87129773	789624	3	221,105,1063,	0,3840,38362,
#Partially deleted in new
chr1	87129853	87134469	chr1:87129853-87134469	0	+	87129853	87129853	8553170	3	141,105,505,	0,3760,4111,
#Partially deleted in new
chr1	87129869	87136669	chr1:87129869-87136669	1	+	87129869	87129869	789624	2	125,3056,	0,3744,
#Deleted in new
chr1	87131954	87136669	chr1:87131954-87136669	1	+	87131954	87131954	789624	4	305,200,105,2705,	0,709,1659,2010,
#Deleted in new
chr1	87131968	87134131	chr1:87131968-87134131	0	+	87131968	87131968	8553170	3	284,105,167,	0,1645,1996,
#Deleted in new
chr1	87131974	87134595	chr1:87131974-87134595	1	+	87131974	87131974	8553170	2	1744,631,	0,1990,
#Deleted in new
chr1	87132001	87133035	chr1:87132001-87133035	0	+	87132001	87132001	8553170	1	1034,	0,
#Deleted in new
chr1	87132002	87136669	chr1:87132002-87136669	1	+	87132002	87132002	8553170	4	257,301,105,2705,	0,609,1611,1962,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	87132054	87162137	chr1:87132054-87162137	0	+	87132054	87132054	8553170	3	205,105,116,	0,1559,29967,
#Deleted in new
chr1	87132054	87134192	chr1:87132054-87134192	0	+	87132054	87132054	8553170	3	205,105,228,	0,1559,1910,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	87212668	87251331	chr1:87212668-87251331	0	+	87212668	87212668	8553170	4	136,162,23,831,	0,7514,30946,37832,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	87212704	87264741	chr1:87212704-87264741	3	+	87212704	87212704	8553170	4	100,68,162,3534,	0,4228,7478,48503,
#Partially deleted in new
chr1	87221096	87261717	chr1:87221096-87261717	0	+	87221096	87221096	8553170	3	52,120,510,	0,5930,40111,
#Partially deleted in new
chr1	87328467	87348923	chr1:87328467-87348923	3	+	87332015	87344796	0	5	777,239,97,156,4136,	0,3545,11068,11579,16320,
#Deleted in new
chr1	87329098	87339632	chr1:87329098-87339632	0	+	87329098	87329098	8553170	4	146,83,239,97,	0,2128,2914,10437,
#Partially deleted in new
chr1	87331667	87345408	chr1:87331667-87345408	1	+	87332015	87344796	0	5	147,239,97,156,621,	0,345,7868,8379,13120,
#Partially deleted in new
chr1	87331780	87345015	chr1:87331780-87345015	0	+	87331780	87331780	8553170	4	471,97,156,228,	0,7755,8266,13007,
#Partially deleted in new
chr1	87353523	87371655	chr1:87353523-87371655	3	-	87353523	87353523	789624	4	344,355,103,87,	0,1320,4052,18045,
#Deleted in new
chr1	87453239	87453373	chr1:87453239-87453373	7	-	87453239	87453239	16724991	1	134,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	87620802	88228297	chr1:87620802-88228297	1	-	87620802	87620802	8553170	7	1405,82,71,83,160,49,202,	0,3910,6661,9612,17094,414048,607293,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	87686229	88540659	chr1:87686229-88540659	3	-	87686229	87686229	8553170	6	2499,142,49,255,127,88,	0,116634,348621,842606,843893,854342,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	87805285	87808372	chr1:87805285-87808372	3	-	87805285	87805285	8553170	1	3087,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	87899453	88329083	chr1:87899453-88329083	0	-	87899453	87899453	8553170	4	788,49,30,138,	0,135397,427733,429492,
#Partially deleted in new
chr1	87899453	88269175	chr1:87899453-88269175	1	-	87899453	87899453	8553170	4	788,179,49,24,	0,4445,135397,369698,
#Deleted in new
chr1	87899908	87905714	chr1:87899908-87905714	0	-	87899908	87899908	8553170	3	333,179,275,	0,3990,5531,
#Partially deleted in new
chr1	87903829	87993277	chr1:87903829-87993277	1	-	87903829	87903829	8553170	9	248,106,104,90,103,104,109,102,281,	0,1610,2230,2490,5267,61473,83108,88618,89167,
#Partially deleted in new
chr1	88313152	88313302	chr1:88313152-88313302	7	+	88313152	88313152	16724991	1	150,	0,
#Partially deleted in new
chr1	88472176	88530249	chr1:88472176-88530249	0	-	88472176	88472176	8553170	4	723,85,255,127,	0,1927,56659,57946,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	88477827	88478114	chr1:88477827-88478114	3	-	88477827	88477827	8553170	1	287,	0,
#Deleted in new
chr1	88498308	88498676	chr1:88498308-88498676	7	-	88498308	88498308	16724991	1	368,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	88513129	88684945	chr1:88513129-88684945	1	-	88513129	88513129	8553170	7	1924,95,88,145,209,50,82,	0,15706,27442,43774,56857,57680,171734,
#Deleted in new
chr1	88519999	88520170	chr1:88519999-88520170	3	+	88519999	88519999	8553170	1	171,	0,
#Partially deleted in new
chr1	88537512	88685204	chr1:88537512-88685204	1	-	88537512	88537512	789624	4	3147,145,209,41,	0,19391,32474,147651,
#Partially deleted in new
chr1	88540302	88570860	chr1:88540302-88570860	0	-	88540302	88540302	8553170	4	357,145,209,51,	0,16601,29684,30507,
#Deleted in new
chr1	88577879	88578201	chr1:88577879-88578201	7	+	88577879	88577879	16724991	1	322,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	88684221	88806268	chr1:88684221-88806268	1	+	88684580	88805810	789624	11	407,301,155,118,146,217,186,110,144,76,772,	0,56766,76000,86130,87199,87441,100417,101882,120169,120624,121275,
#Partially deleted in new
chr1	88684221	88836255	chr1:88684221-88836255	3	+	88684580	88833448	0	22	407,301,155,118,146,217,186,110,144,76,175,127,131,76,92,177,63,77,143,108,81,3011,	0,56766,76000,86130,87199,87441,100417,101882,120169,120624,121275,121669,123091,123307,123462,129335,137719,140088,144259,148522,148855,149023,
#Partially deleted in new
chr1	88684572	88833519	chr1:88684572-88833519	1	+	88684580	88833448	0	21	56,301,155,118,146,217,186,110,76,175,127,131,76,92,177,63,77,143,108,81,275,	0,56415,75649,85779,86848,87090,100066,101531,120273,120924,121318,122740,122956,123111,128984,137368,139737,143908,148171,148504,148672,
#Partially deleted in new
chr1	88771454	88804894	chr1:88771454-88804894	0	+	88771454	88804894	789624	5	112,217,110,144,49,	0,208,14649,32936,33391,
#Partially deleted in new
chr1	88824345	88829167	chr1:88824345-88829167	0	+	88824345	88829021	789624	3	41,143,158,	0,4135,4664,
#Deleted in new
chr1	88829101	88829419	chr1:88829101-88829419	7	+	88829101	88829101	16724991	1	318,	0,
#Deleted in new
chr1	88832928	88833431	chr1:88832928-88833431	0	+	88832928	88832928	8553170	2	229,187,	0,316,
#Partially deleted in new
chr1	88852931	88891618	chr1:88852931-88891618	3	-	88853212	88891499	0	7	415,282,130,147,134,107,136,	0,4274,6950,7208,11049,34329,38551,
#Partially deleted in new
chr1	88853223	88891496	chr1:88853223-88891496	0	-	88853318	88891496	789624	7	123,115,130,147,134,107,14,	0,4149,6658,6916,10757,34037,38259,
#Partially deleted in new
chr1	88857264	88891527	chr1:88857264-88891527	0	-	88857264	88857264	8553170	7	223,107,130,147,134,107,45,	0,1416,2617,2875,6716,29996,34218,
#Partially deleted in new
chr1	88857314	88891589	chr1:88857314-88891589	0	-	88857314	88891499	789624	6	173,130,147,134,92,107,	0,2567,2825,6666,29961,34168,
#Partially deleted in new
chr1	88860055	88891645	chr1:88860055-88891645	0	-	88860055	88860055	8553170	3	231,134,163,	0,3925,31427,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	88863985	88888048	chr1:88863985-88888048	0	-	88863985	88863985	8553170	3	129,107,357,	0,23275,23706,
#Partially deleted in new
chr1	88864043	88891944	chr1:88864043-88891944	0	-	88864043	88864043	8553170	3	71,107,338,	0,23217,27563,
#Deleted in new
chr1	88923369	88923844	chr1:88923369-88923844	7	+	88923369	88923369	16724991	1	475,	0,
#Partially deleted in new
chr1	88935772	88992776	chr1:88935772-88992776	1	-	88936182	88969464	789624	13	473,87,74,187,90,77,121,126,87,150,145,59,192,	0,7232,7577,13318,17290,19376,25394,25608,26286,29056,32897,33636,56812,
#Partially deleted in new
chr1	88935772	88988355	chr1:88935772-88988355	0	-	88935772	88935772	8553170	14	473,87,74,187,90,77,121,126,87,157,150,145,59,104,	0,7232,7577,13318,17290,19376,25394,25608,26286,28783,29056,32897,33636,52479,
#Partially deleted in new
chr1	88935815	88992921	chr1:88935815-88992921	3	-	88936182	88988350	789624	14	430,87,74,187,90,77,121,126,87,150,145,59,100,337,	0,7189,7534,13275,17247,19333,25351,25565,26243,29013,32854,33593,52436,56769,
#Partially deleted in new
chr1	88961166	88992953	chr1:88961166-88992953	0	-	88961166	88988350	789624	9	121,126,87,150,145,59,100,164,67,	0,214,892,3662,7503,8242,27085,31418,31720,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	88979455	88992772	chr1:88979455-88992772	1	-	88982653	88983826	789624	2	4611,188,	0,13129,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	88979458	88992960	chr1:88979458-88992960	3	-	88982653	88983826	789624	3	4608,100,376,	0,8793,13126,
#Partially deleted in new
chr1	88983350	88992759	chr1:88983350-88992759	0	-	88983350	88983826	789624	3	716,100,175,	0,4901,9234,
#Partially deleted in new
chr1	89006665	89022882	chr1:89006665-89022882	3	-	89007723	89020721	789624	11	1187,194,103,213,281,243,197,110,128,212,199,	0,2281,2726,4238,5081,6519,7417,7881,8621,13866,16018,
#Partially deleted in new
chr1	89006678	89022851	chr1:89006678-89022851	0	-	89006678	89006678	8553170	10	1174,194,103,213,281,1095,110,128,212,168,	0,2268,2713,4225,5068,6506,7868,8608,13853,16005,
#Partially deleted in new
chr1	89006679	89022778	chr1:89006679-89022778	0	-	89009489	89020721	789624	9	1173,194,103,243,197,110,128,212,95,	0,2267,2712,6505,7403,7867,8607,13852,16004,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	89007269	89022894	chr1:89007269-89022894	0	-	89020125	89020721	789624	12	583,194,103,213,281,243,197,110,128,86,212,211,	0,1677,2122,3634,4477,5915,6813,7277,8017,12856,13262,15414,
#Partially deleted in new
chr1	89007768	89022838	chr1:89007768-89022838	0	-	89014545	89020721	789624	11	84,194,103,213,281,243,197,252,128,212,155,	0,1178,1623,3135,3978,5416,6314,6636,7518,12763,14915,
#Partially deleted in new
chr1	89008843	89011835	chr1:89008843-89011835	0	-	89008889	89011835	789624	4	297,103,213,89,	0,548,2060,2903,
#Partially deleted in new
chr1	89008934	89013299	chr1:89008934-89013299	0	-	89008934	89013299	789624	3	206,103,102,	0,457,4263,
#Partially deleted in new
chr1	89014101	89022866	chr1:89014101-89022866	0	-	89014101	89015367	789624	4	178,110,128,183,	0,445,1185,8582,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	89015319	89022860	chr1:89015319-89022860	0	-	89015319	89015319	8553170	4	95,82,212,177,	0,4810,5212,7364,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	89015342	89022803	chr1:89015342-89022803	0	-	89020430	89020721	789624	3	72,391,120,	0,5010,7341,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	89020245	89020365	chr1:89020245-89020365	3	-	89020245	89020245	8553170	1	120,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	89020299	89022751	chr1:89020299-89022751	0	-	89020299	89020299	8553170	2	444,68,	0,2384,
#Partially deleted in new
chr1	89052318	89065360	chr1:89052318-89065360	3	-	89053354	89063234	0	11	1150,194,103,213,281,243,203,110,128,209,201,	0,2363,2794,3697,4535,5673,6522,6998,7878,10726,12841,
#Partially deleted in new
chr1	89053299	89055341	chr1:89053299-89055341	0	-	89053299	89053299	8553170	2	169,660,	0,1382,
#Partially deleted in new
chr1	89053361	89055377	chr1:89053361-89055377	0	-	89053361	89053361	8553170	3	107,194,265,	0,1320,1751,
#Partially deleted in new
chr1	89053436	89056059	chr1:89053436-89056059	0	-	89053436	89053436	8553170	3	32,534,44,	0,1245,2579,
#Deleted in new
chr1	89055568	89056941	chr1:89055568-89056941	0	-	89055568	89055568	8553170	2	660,88,	0,1285,
#Deleted in new
chr1	89058340	89059355	chr1:89058340-89059355	0	-	89058340	89058340	8553170	2	703,39,	0,976,
#Deleted in new
chr1	89058989	89060277	chr1:89058989-89060277	0	-	89058989	89058989	8553170	2	437,81,	0,1207,
#Partially deleted in new
chr1	89062706	89065230	chr1:89062706-89065230	0	-	89062706	89062706	8553170	2	547,71,	0,2453,
#Deleted in new
chr1	89104284	89104767	chr1:89104284-89104767	7	-	89104284	89104284	16724991	1	483,	0,
#Partially deleted in new
chr1	89106131	89150456	chr1:89106131-89150456	0	-	89108174	89121966	789624	15	921,269,194,103,213,281,243,197,110,128,207,200,213,281,127,	0,1891,3545,4032,6340,7884,10860,11445,14047,15011,15645,19731,41435,43160,44198,
#Partially deleted in new
chr1	89107999	89126114	chr1:89107999-89126114	3	-	89108174	89121966	789624	11	292,194,103,213,281,243,197,110,128,207,252,	0,1677,2164,4472,6016,8992,9577,12179,13143,13777,17863,
#Partially deleted in new
chr1	89108116	89113050	chr1:89108116-89113050	0	-	89108116	89108116	8553170	5	175,194,103,213,109,	0,1560,2047,4355,4825,
#Partially deleted in new
chr1	89110186	89120220	chr1:89110186-89120220	0	-	89110186	89110186	8553170	5	80,213,281,243,2644,	0,2285,3829,6805,7390,
#Partially deleted in new
chr1	89131750	89176040	chr1:89131750-89176040	3	-	89132148	89171935	789624	11	653,194,103,213,281,246,197,110,128,209,120,	0,1507,9795,15816,17541,18579,20517,20917,32980,39995,44170,
#Partially deleted in new
chr1	89133300	89176009	chr1:89133300-89176009	0	-	89133300	89171935	8553170	9	143,213,281,246,197,110,128,209,89,	0,14266,15991,17029,18967,19367,31430,38445,42620,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	89181147	89198932	chr1:89181147-89198932	3	-	89185253	89198834	789624	11	4322,194,103,213,281,246,197,110,128,195,138,	0,5185,5852,7434,8890,10113,11756,12155,14149,15962,17647,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	89181772	89185398	chr1:89181772-89185398	0	-	89181772	89181772	8553170	2	606,162,	0,3464,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	89198713	89207040	chr1:89198713-89207040	3	+	89198713	89198713	8553170	2	345,1257,	0,7070,
#Deleted in new
chr1	89203279	89203464	chr1:89203279-89203464	7	-	89203279	89203279	16724991	1	185,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	89258949	89266579	chr1:89258949-89266579	0	-	89258949	89258949	8553170	4	1868,1729,281,234,	0,3270,5736,7396,
#Partially deleted in new
chr1	89260581	89270863	chr1:89260581-89270863	3	-	89260703	89269555	789624	11	236,182,103,213,281,243,197,110,128,209,109,	0,1638,2101,3154,4104,5764,6375,6835,8147,8784,10173,
#Partially deleted in new
chr1	89260581	89269754	chr1:89260581-89269754	3	+	89260581	89260581	8553170	2	167,157,	0,9016,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	89260581	89262274	chr1:89260581-89262274	0	-	89260581	89260581	8553170	2	236,203,	0,1490,
#Partially deleted in new
chr1	89260585	89268856	chr1:89260585-89268856	0	-	89260585	89260585	8553170	3	232,74,128,	0,6867,8143,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	89262697	89272804	chr1:89262697-89272804	0	-	89262697	89269555	789624	8	88,213,281,243,197,110,128,3439,	0,1038,1988,3648,4259,4719,6031,6668,
#Deleted in new
chr1	89289675	89290337	chr1:89289675-89290337	7	-	89289675	89289675	16724991	1	662,	0,
#Partially deleted in new
chr1	89324521	89334880	chr1:89324521-89334880	7	+	89324521	89324521	16724991	4	245,278,208,66,	0,7416,8376,10293,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	89364057	89386461	chr1:89364057-89386461	3	+	89368551	89385469	789624	11	70,213,128,110,197,246,281,213,103,194,1232,	0,4471,5488,14045,14359,16328,17636,18606,19594,20035,21172,
#Partially deleted in new
chr1	89394032	89394665	chr1:89394032-89394665	7	+	89394032	89394032	16724991	1	633,	0,
#Partially deleted in new
chr1	89407678	89424934	chr1:89407678-89424934	7	+	89407678	89407678	16724991	5	80,209,128,140,677,	0,2621,12512,13402,16579,
#Partially deleted in new
chr1	89410318	89426243	chr1:89410318-89426243	5	+	89410318	89410318	16724991	9	190,128,110,121,580,213,90,194,114,	0,9872,10762,11136,11386,12592,13590,13939,15811,
#Partially deleted in new
chr1	89524835	89582961	chr1:89524835-89582961	0	+	89582650	89582961	789624	6	187,25,61,55,98,337,	0,2126,43411,43603,54755,57789,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	89524853	89597848	chr1:89524853-89597848	3	+	89582650	89593043	789624	9	169,25,57,326,61,55,98,2165,5078,	0,2108,25061,33857,43393,43585,54737,57771,67917,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	89524882	89597848	chr1:89524882-89597848	0	+	89582650	89593043	789624	7	140,61,55,139,98,2165,5078,	0,43364,43556,47591,54708,57742,67888,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	89524902	89597864	chr1:89524902-89597864	1	+	89582650	89593043	789624	6	120,61,55,98,2165,5094,	0,43344,43536,54688,57722,67868,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	89568240	89597859	chr1:89568240-89597859	1	+	89582650	89593043	789624	5	67,55,98,2165,5089,	0,198,11350,14384,24530,
#Partially deleted in new
chr1	89568470	89584462	chr1:89568470-89584462	1	+	89582650	89583345	789624	5	23,98,704,3,1129,	0,11120,14154,14859,14863,
#Partially deleted in new
chr1	89583240	89632191	chr1:89583240-89632191	3	-	89583240	89583240	8553170	5	184,183,62,165,176,	0,4662,11920,14799,48775,
#Partially deleted in new
chr1	89624849	89632894	chr1:89624849-89632894	1	-	89624849	89624849	789624	3	356,194,238,	0,7166,7807,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	89626260	89632747	chr1:89626260-89632747	1	-	89626260	89626260	8553170	3	566,194,91,	0,5755,6396,
#Partially deleted in new
chr1	89629724	89676386	chr1:89629724-89676386	3	+	89629724	89629724	8553170	4	58,73,150,156,	0,1889,38436,46506,
#Deleted in new
chr1	89631875	89632761	chr1:89631875-89632761	0	-	89631875	89631875	8553170	2	334,105,	0,781,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	89633071	89719533	chr1:89633071-89719533	3	+	89686473	89714982	789624	3	251,142,6825,	0,53398,79637,
#Partially deleted in new
chr1	89633071	89764518	chr1:89633071-89764518	0	+	89633071	89633071	8553170	4	251,142,84,2516,	0,53398,125785,128931,
#Partially deleted in new
chr1	89633139	89933250	chr1:89633139-89933250	3	+	89686473	89843658	789624	4	183,142,145,184,	0,53330,210498,299927,
#Partially deleted in new
chr1	89633180	89708648	chr1:89633180-89708648	0	+	89686473	89706340	789624	4	142,142,99,121,	0,53289,73121,75347,
#Deleted in new
chr1	89661211	89661353	chr1:89661211-89661353	7	-	89661211	89661211	16724991	1	142,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	89763544	89769903	chr1:89763544-89769903	0	+	89763544	89763544	8553170	2	149,1686,	0,4673,
#Partially deleted in new
chr1	89788913	89790492	chr1:89788913-89790492	3	+	89788913	89788913	8553170	2	69,440,	0,1139,
#Deleted in new
chr1	89820173	89820868	chr1:89820173-89820868	3	-	89820173	89820173	8553170	1	695,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	89821013	89933160	chr1:89821013-89933160	0	+	89933068	89933160	789624	4	278,145,71,94,	0,22624,108794,112053,
#Partially deleted in new
chr1	89821031	89936611	chr1:89821031-89936611	3	+	89933068	89935645	789624	3	260,145,3545,	0,22606,112035,
#Partially deleted in new
chr1	89821920	89936001	chr1:89821920-89936001	1	+	89933068	89935645	789624	3	265,145,2935,	0,21717,111146,
#Partially deleted in new
chr1	89833692	89933433	chr1:89833692-89933433	0	+	89933068	89933433	789624	3	85,145,367,	0,9945,99374,
#Partially deleted in new
chr1	89843047	89933418	chr1:89843047-89933418	0	+	89933068	89933418	789624	3	169,145,352,	0,590,90019,
#Partially deleted in new
chr1	89843422	89933628	chr1:89843422-89933628	0	+	89933068	89933628	789624	2	360,562,	0,89644,
#Partially deleted in new
chr1	89846579	89933892	chr1:89846579-89933892	0	+	89933068	89933892	789624	2	79,826,	0,86487,
#Deleted in new
chr1	89939600	89940147	chr1:89939600-89940147	3	+	89939600	89939600	8553170	1	547,	0,
#Deleted in new
chr1	89987712	89987944	chr1:89987712-89987944	3	-	89987712	89987712	8553170	1	232,	0,
#Deleted in new
chr1	89993592	89994321	chr1:89993592-89994321	7	-	89993592	89993592	16724991	1	729,	0,
#Partially deleted in new
chr1	89995111	90028226	chr1:89995111-90028226	0	+	89995257	90010098	789624	10	162,45,90,199,112,148,100,131,96,873,	0,2998,9891,14976,18014,22205,23573,25680,27138,32242,
#Partially deleted in new
chr1	89995114	90028538	chr1:89995114-90028538	3	+	89995257	90027701	789624	12	159,45,36,112,406,199,112,148,100,131,96,1185,	0,2995,9888,10018,12230,14973,18011,22202,23570,25677,27135,32239,
#Partially deleted in new
chr1	89995133	90006449	chr1:89995133-90006449	1	+	89995257	90005248	789624	4	140,45,36,1317,	0,2976,9869,9999,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	89995136	90035531	chr1:89995136-90035531	1	+	89995257	90027701	789624	12	137,45,36,112,139,199,112,148,100,131,96,8178,	0,2973,9866,9996,12475,14951,17989,22180,23548,25655,27113,32217,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	90253455	90253559	chr1:90253455-90253559	3	-	90253455	90253455	8553170	1	104,	0,
#Partially deleted in new
chr1	90510909	90533472	chr1:90510909-90533472	3	-	90510909	90510909	8553170	4	76,22,28,105,	0,1077,3072,22458,
#Partially deleted in new
chr1	90711538	90717237	chr1:90711538-90717237	3	-	90712311	90717195	789624	3	1086,226,667,	0,2992,5032,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	90782982	90851657	chr1:90782982-90851657	3	-	90782982	90782982	789624	3	441,90,175,	0,6415,68500,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	90782983	90851600	chr1:90782983-90851600	1	-	90782983	90782983	8553170	5	440,90,267,216,118,	0,6414,48946,54566,68499,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	90782985	90851515	chr1:90782985-90851515	1	-	90782985	90782985	8553170	4	438,90,267,33,	0,6412,48944,68497,
#Partially deleted in new
chr1	90829546	90836161	chr1:90829546-90836161	0	-	90829546	90829546	789624	2	2650,336,	0,6279,
#Partially deleted in new
chr1	90829546	90851618	chr1:90829546-90851618	0	-	90829546	90829546	789624	2	2650,136,	0,21936,
#Partially deleted in new
chr1	90831787	90834689	chr1:90831787-90834689	1	-	90831787	90831787	8553170	2	409,69,	0,2833,
#Partially deleted in new
chr1	90831868	90851650	chr1:90831868-90851650	0	-	90831868	90831868	8553170	3	328,216,168,	0,5681,19614,
#Partially deleted in new
chr1	90831873	90834689	chr1:90831873-90834689	1	-	90831873	90831873	8553170	2	323,304,	0,2512,
#Partially deleted in new
chr1	90831877	90834689	chr1:90831877-90834689	1	-	90831877	90831877	8553170	2	319,180,	0,2632,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	90841586	90849472	chr1:90841586-90849472	3	+	90841586	90841586	8553170	4	58,146,66,484,	0,4067,6469,7402,
#Partially deleted in new
chr1	90851758	90855253	chr1:90851758-90855253	3	+	90851758	90851758	8553170	2	521,1026,	0,2469,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	90860549	90862920	chr1:90860549-90862920	3	-	90860549	90860549	8553170	2	815,64,	0,2307,
#Partially deleted in new
chr1	90892991	90893612	chr1:90892991-90893612	7	-	90892991	90892991	16724991	1	621,	0,
#Partially deleted in new
chr1	90915297	91021473	chr1:90915297-91021473	1	-	90916797	90982353	789624	6	1693,103,606,3038,61,201,	0,2754,22187,22974,67012,105975,
#Partially deleted in new
chr1	90915301	91022255	chr1:90915301-91022255	3	-	90916797	90982353	789624	6	1689,103,606,3038,61,266,	0,2750,22183,22970,67008,106688,
#Partially deleted in new
chr1	90915303	91021457	chr1:90915303-91021457	1	-	90916797	90982331	789624	4	1687,103,61,185,	0,2748,67006,105969,
#Partially deleted in new
chr1	90916184	91022272	chr1:90916184-91022272	1	-	90916797	90982331	789624	4	806,103,61,283,	0,1867,66125,105805,
#Partially deleted in new
chr1	90916389	91022014	chr1:90916389-91022014	0	-	90916389	90916389	8553170	5	601,103,61,61,25,	0,1662,56763,65920,105600,
#Partially deleted in new
chr1	90916489	90935528	chr1:90916489-90935528	0	-	90916489	90916489	8553170	3	501,103,121,	0,1562,18918,
#Partially deleted in new
chr1	90916790	90918391	chr1:90916790-90918391	0	-	90916790	90916790	8553170	2	200,340,	0,1261,
#Partially deleted in new
chr1	90937882	90940120	chr1:90937882-90940120	1	-	90937934	90940069	789624	3	55,152,1849,	0,56,389,
#Partially deleted in new
chr1	90940948	91022081	chr1:90940948-91022081	0	-	90940948	90940948	8553170	3	361,61,92,	0,41361,81041,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	90972743	90982370	chr1:90972743-90982370	0	-	90972743	90972743	8553170	2	470,61,	0,9566,
#Deleted in new
chr1	91020447	91022055	chr1:91020447-91022055	0	-	91020447	91020447	8553170	2	754,66,	0,1542,
#Deleted in new
chr1	91020528	91021725	chr1:91020528-91021725	0	-	91020528	91020528	8553170	2	673,37,	0,1160,
#Deleted in new
chr1	91023918	91024804	chr1:91023918-91024804	7	+	91023918	91023918	16724991	1	886,	0,
#Partially deleted in new
chr1	91260765	91404869	chr1:91260765-91404869	3	-	91261289	91401082	789624	39	594,152,112,91,111,104,80,116,81,147,104,158,84,86,132,98,48,107,92,81,48,134,95,146,102,44,89,201,159,78,152,133,71,48,260,310,113,98,72,	0,1475,1715,5251,6979,12946,13964,15862,16216,52583,53191,55049,55335,55625,58312,58527,62184,62327,63909,82664,86663,89972,90783,91740,92285,92490,114592,114761,117259,117637,118297,119338,120146,124421,124809,133327,135527,140246,144032,
#Partially deleted in new
chr1	91260765	91352637	chr1:91260765-91352637	0	-	91260765	91260765	8553170	21	594,152,112,111,104,80,116,81,147,104,158,84,86,132,98,48,107,92,81,48,132,	0,1475,1715,6979,12946,13964,15862,16216,52583,53191,55049,55335,55625,58312,58527,62184,62327,63909,82664,86663,91740,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	91261624	91261724	chr1:91261624-91261724	3	+	91261624	91261624	8553170	1	100,	0,
#Partially deleted in new
chr1	91262185	91347449	chr1:91262185-91347449	0	-	91262236	91347449	789624	19	207,112,91,111,104,80,116,81,147,104,158,84,86,98,48,107,92,81,21,	0,295,3831,5559,11526,12544,14442,14796,51163,51771,53629,53915,54205,57107,60764,60907,62489,81244,85243,
#Partially deleted in new
chr1	91316139	91328937	chr1:91316139-91328937	0	-	91316139	91316139	8553170	5	45,98,48,92,100,	0,3153,6810,8535,12698,
#Partially deleted in new
chr1	91328368	91329513	chr1:91328368-91329513	7	+	91328368	91328368	16724991	1	1145,	0,
#Partially deleted in new
chr1	91377442	91404809	chr1:91377442-91404809	0	-	91377442	91377442	8553170	11	741,78,156,133,71,48,260,310,113,98,12,	0,960,1616,2661,3469,7744,8132,16650,18850,23569,27355,
#Partially deleted in new
chr1	91377758	91404808	chr1:91377758-91404808	0	-	91377758	91377758	8553170	11	425,78,152,133,71,48,260,310,113,98,11,	0,644,1304,2345,3153,7428,7816,16334,18534,23253,27039,
#Partially deleted in new
chr1	91380232	91404856	chr1:91380232-91404856	0	-	91380232	91401082	789624	6	4,71,48,260,98,59,	0,679,4954,5342,20779,24565,
#Partially deleted in new
chr1	91385613	91404840	chr1:91385613-91404840	0	-	91385613	91401069	789624	4	221,310,98,43,	0,8479,15398,19184,
#Partially deleted in new
chr1	91394172	91404735	chr1:91394172-91404735	0	-	91394172	91401082	789624	4	230,113,98,155,	0,2120,6839,10408,
#Partially deleted in new
chr1	91500892	91525764	chr1:91500892-91525764	3	+	91501716	91524435	0	12	56,178,84,136,94,143,250,96,179,83,150,1724,	0,761,6961,7369,10704,10888,12165,13055,13926,14901,19237,23148,
#Partially deleted in new
chr1	91501107	91525764	chr1:91501107-91525764	1	+	91501716	91524435	0	12	196,178,84,136,94,143,250,96,179,83,150,1724,	0,546,6746,7154,10489,10673,11950,12840,13711,14686,19022,22933,
#Partially deleted in new
chr1	91501137	91511823	chr1:91501137-91511823	0	+	91501716	91511823	789624	6	166,178,84,136,94,43,	0,516,6716,7124,10459,10643,
#Partially deleted in new
chr1	91501159	91508405	chr1:91501159-91508405	0	+	91501159	91501159	8553170	4	323,178,84,144,	0,494,6694,7102,
#Partially deleted in new
chr1	91513126	91520280	chr1:91513126-91520280	0	+	91513126	91513126	8553170	4	181,179,83,151,	0,1692,2667,7003,
#Deleted in new
chr1	91534665	91535593	chr1:91534665-91535593	7	-	91534665	91534665	16724991	1	928,	0,
#Deleted in new
chr1	91600170	91600321	chr1:91600170-91600321	7	+	91600170	91600170	16724991	1	151,	0,
#Deleted in new
chr1	91642515	91644082	chr1:91642515-91644082	7	+	91642515	91642515	16724991	1	1567,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	91680342	91862046	chr1:91680342-91862046	0	-	91786203	91861531	789624	20	3515,108,42,121,54,159,141,153,335,190,148,169,123,68,138,129,59,42,185,576,	0,15329,17746,28320,31900,35893,36225,38969,39550,41612,47316,49462,54433,74652,78270,90499,102863,105843,116944,181128,
#Partially deleted in new
chr1	91680344	91886279	chr1:91680344-91886279	3	-	91683738	91861531	789624	17	3513,108,42,121,300,159,141,153,338,190,148,169,184,138,185,174,402,	0,15327,17744,28318,31898,35891,36223,38967,39548,41610,47314,49460,54431,78268,116942,181126,205533,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	91682425	91906335	chr1:91682425-91906335	1	-	91683738	91861531	789624	18	1432,108,42,121,300,159,141,153,335,190,148,169,184,138,185,174,61,510,	0,13246,15663,26237,29817,33810,34142,36886,37467,39529,45233,47379,52350,76187,114861,179045,217211,223400,
#Partially deleted in new
chr1	91682429	91861593	chr1:91682429-91861593	1	-	91683738	91861531	789624	16	1428,108,42,121,300,159,141,153,338,190,148,169,184,138,185,123,	0,13242,15659,26233,29813,33806,34138,36882,37463,39525,45229,47375,52346,76183,114857,179041,
#Partially deleted in new
chr1	91683728	91886109	chr1:91683728-91886109	1	-	91683738	91861531	789624	17	129,108,42,121,300,159,141,153,335,190,148,169,184,138,185,174,232,	0,11943,14360,24934,28514,32507,32839,35583,36164,38226,43930,46076,51047,74884,113558,177742,202149,
#Partially deleted in new
chr1	91695489	91712363	chr1:91695489-91712363	0	-	91695489	91695489	8553170	4	290,42,121,121,	0,2599,13173,16753,
#Partially deleted in new
chr1	91719892	91727918	chr1:91719892-91727918	0	-	91719892	91719892	8553170	3	335,190,260,	0,2062,7766,
#Partially deleted in new
chr1	91727776	91766432	chr1:91727776-91766432	0	-	91727776	91727776	8553170	5	30,169,184,138,48,	0,2028,6999,30836,38608,
#Partially deleted in new
chr1	91797426	91886122	chr1:91797426-91886122	0	-	91797426	91861531	789624	4	45,174,87,245,	0,64044,69329,88451,
#Deleted in new
chr1	91829773	91830066	chr1:91829773-91830066	3	-	91829773	91829773	8553170	1	293,	0,
#Partially deleted in new
chr1	91863838	91886151	chr1:91863838-91886151	0	-	91863838	91863838	8553170	2	441,122,	0,22191,
#Partially deleted in new
chr1	91949370	92014421	chr1:91949370-92014421	3	+	91962754	92014274	0	20	312,69,229,138,115,173,351,129,189,173,290,114,138,62,51,172,101,206,181,216,	0,519,13347,15256,18775,26895,27672,28797,30198,31272,31518,31897,32247,41813,42893,44712,52678,55043,55748,64835,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	91949370	92014421	chr1:91949370-92014421	1	+	91964653	92014274	0	19	312,585,138,115,173,351,129,189,173,290,114,138,62,51,172,101,206,181,216,	0,519,15256,18775,26895,27672,28797,30198,31272,31518,31897,32247,41813,42893,44712,52678,55043,55748,64835,
#Partially deleted in new
chr1	91949370	92014426	chr1:91949370-92014426	1	+	91962754	92014274	0	18	312,229,115,173,351,129,189,173,290,114,138,62,51,172,101,206,181,221,	0,13347,18775,26895,27672,28797,30198,31272,31518,31897,32247,41813,42893,44712,52678,55043,55748,64835,
#Partially deleted in new
chr1	91949370	92014426	chr1:91949370-92014426	1	+	91962754	92014274	0	19	312,229,138,127,173,351,129,189,173,290,114,138,62,51,172,101,206,181,221,	0,13347,15256,18775,26895,27672,28797,30198,31272,31518,31897,32247,41813,42893,44712,52678,55043,55748,64835,
#Partially deleted in new
chr1	91949371	91976350	chr1:91949371-91976350	0	+	91962754	91976350	789624	6	148,45,229,138,115,85,	0,266,13346,15255,18774,26894,
#Partially deleted in new
chr1	91949383	91976421	chr1:91949383-91976421	0	+	91962754	91976421	789624	6	105,45,229,138,115,156,	0,254,13334,15243,18762,26882,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	91949397	91976286	chr1:91949397-91976286	0	+	91962754	91976286	789624	6	285,575,229,138,115,21,	0,502,13320,15229,18748,26868,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	91949397	91962910	chr1:91949397-91962910	0	+	91962754	91962910	789624	4	91,170,96,193,	0,907,1318,13320,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	91949397	91950299	chr1:91949397-91950299	0	+	91949397	91949397	8553170	3	122,45,400,	0,240,502,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	91949397	91950302	chr1:91949397-91950302	0	+	91949397	91949397	8553170	3	91,45,403,	0,240,502,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	91949397	91950332	chr1:91949397-91950332	0	+	91949397	91949397	8553170	3	91,45,443,	0,240,492,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	91949400	91962796	chr1:91949400-91962796	0	+	91962754	91962796	789624	3	88,367,79,	0,707,13317,
#Partially deleted in new
chr1	91949400	91980743	chr1:91949400-91980743	0	+	91962754	91980743	789624	9	282,229,138,115,173,351,129,189,101,	0,13317,15226,18745,26865,27642,28767,30168,31242,
#Partially deleted in new
chr1	91949400	91976286	chr1:91949400-91976286	0	+	91962754	91976286	789624	5	88,229,138,115,21,	0,13317,15226,18745,26865,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	91949402	91950312	chr1:91949402-91950312	0	+	91949402	91949402	8553170	3	117,45,423,	0,235,487,
#Partially deleted in new
chr1	91949402	91964735	chr1:91949402-91964735	0	+	91962754	91964735	789624	5	117,45,69,229,109,	0,235,487,13315,15224,
#Partially deleted in new
chr1	91949402	91968224	chr1:91949402-91968224	0	+	91964653	91968224	789624	6	117,45,59,140,138,79,	0,235,497,13404,15224,18743,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	91949433	91962849	chr1:91949433-91962849	0	+	91962754	91962849	789624	3	249,170,132,	0,871,13284,
#Partially deleted in new
chr1	91952161	92014421	chr1:91952161-92014421	1	+	91962754	92014274	0	19	97,229,138,115,173,351,129,189,173,290,114,138,62,51,172,101,206,181,216,	0,10556,12465,15984,24104,24881,26006,27407,28481,28727,29106,29456,39022,40102,41921,49887,52252,52957,62044,
#Partially deleted in new
chr1	91977080	91979603	chr1:91977080-91979603	0	+	91977080	91977080	8553170	3	440,129,35,	0,1087,2488,
#Partially deleted in new
chr1	92029981	92063536	chr1:92029981-92063536	3	+	92030079	92063286	789624	7	329,86,158,129,104,149,482,	0,2523,12841,15550,20335,22528,33073,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	92032560	92043794	chr1:92032560-92043794	0	+	92032560	92032560	8553170	2	30,972,	0,10262,
#Deleted in new
chr1	92066305	92067839	chr1:92066305-92067839	7	+	92066305	92066305	16724991	1	1534,	0,
#Deleted in new
chr1	92074532	92075411	chr1:92074532-92075411	1	-	92074532	92075411	789624	1	879,	0,
#Deleted in new
chr1	92074532	92075441	chr1:92074532-92075441	3	-	92074532	92075441	789624	1	909,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	92080304	92139946	chr1:92080304-92139946	0	+	92080304	92080304	8553170	6	416,198,197,118,90,597,	0,8393,22168,27579,49382,59045,
#Partially deleted in new
chr1	92080304	92184725	chr1:92080304-92184725	0	+	92080571	92147198	789624	17	416,198,197,118,90,81,89,103,183,138,130,62,718,88,140,2331,862,	0,8393,22168,27579,49382,59045,66875,67379,86653,87543,88561,91094,96524,97506,98007,99960,103559,
#Partially deleted in new
chr1	92080304	92184725	chr1:92080304-92184725	3	+	92080571	92184330	789624	18	416,198,197,118,90,81,97,89,103,183,138,130,62,718,88,140,2331,862,	0,8393,22168,27579,49382,59045,60810,66875,67379,86653,87543,88561,91094,96524,97506,98007,99960,103559,
#Partially deleted in new
chr1	92080335	92147840	chr1:92080335-92147840	1	+	92080571	92147801	789624	9	385,198,197,118,90,81,97,89,157,	0,8362,22137,27548,49351,59014,60779,66844,67348,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	92107978	92150882	chr1:92107978-92150882	0	+	92107978	92107978	8553170	7	23,90,81,97,89,103,276,	0,21708,31371,33136,39201,39705,42628,
#Deleted in new
chr1	92114802	92115796	chr1:92114802-92115796	7	-	92114802	92114802	16724991	1	994,	0,
#Deleted in new
chr1	92125300	92126462	chr1:92125300-92126462	7	+	92125300	92125300	16724991	1	1162,	0,
#Partially deleted in new
chr1	92166984	92184722	chr1:92166984-92184722	1	+	92166984	92184330	789624	9	156,138,130,62,718,88,140,2331,859,	0,863,1881,4414,9844,10826,11327,13280,16879,
#Partially deleted in new
chr1	92167856	92184330	chr1:92167856-92184330	1	+	92167856	92184330	789624	8	129,130,62,718,88,140,2331,467,	0,1009,3542,8972,9954,10455,12408,16007,
#Partially deleted in new
chr1	92168922	92184723	chr1:92168922-92184723	1	+	92168961	92184330	789624	7	73,62,718,88,140,2331,860,	0,2476,7906,8888,9389,11342,14941,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	92189236	92190707	chr1:92189236-92190707	3	+	92189236	92189236	8553170	2	409,884,	0,587,
#Deleted in new
chr1	92203147	92203991	chr1:92203147-92203991	7	+	92203147	92203147	16724991	1	844,	0,
#Partially deleted in new
chr1	92217939	92245813	chr1:92217939-92245813	3	+	92231420	92245674	789624	6	109,105,94,169,79,274,	0,13442,24272,26277,26839,27600,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	92218031	92245715	chr1:92218031-92245715	1	+	92244233	92245674	789624	7	17,105,231,94,169,79,176,	0,13350,22674,24180,26185,26747,27508,
#Deleted in new
chr1	92229017	92229435	chr1:92229017-92229435	7	-	92229017	92229017	16724991	1	418,	0,
#Partially deleted in new
chr1	92246401	92298976	chr1:92246401-92298976	3	-	92246529	92297999	0	19	245,83,112,64,110,85,74,42,90,31,54,188,103,238,109,120,126,69,52,	0,660,1476,16461,17221,18152,20017,20298,21511,21703,23321,25063,40088,42512,43796,45016,51002,51559,52523,
#Partially deleted in new
chr1	92246489	92298987	chr1:92246489-92298987	0	-	92263692	92297999	0	18	157,83,112,64,110,74,42,90,31,54,188,103,238,109,120,126,69,63,	0,572,1388,16373,17133,19929,20210,21423,21615,23233,24975,40000,42424,43708,44928,50914,51471,52435,
#Partially deleted in new
chr1	92246491	92248408	chr1:92246491-92248408	0	-	92246491	92246491	8553170	3	155,83,531,	0,570,1386,
#Partially deleted in new
chr1	92247061	92271652	chr1:92247061-92271652	0	-	92247061	92271652	789624	10	83,112,64,110,85,74,90,31,54,188,	0,816,15801,16561,17492,19357,20851,21043,22661,24403,
#Partially deleted in new
chr1	92262864	92286592	chr1:92262864-92286592	0	-	92262864	92286592	789624	9	62,110,54,42,90,31,54,188,103,	0,758,3675,3835,5048,5240,6858,8600,23625,
#Deleted in new
chr1	92297520	92298987	chr1:92297520-92298987	0	-	92297520	92297520	8553170	2	509,63,	0,1404,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	92298964	92402056	chr1:92298964-92402056	3	+	92299073	92387011	789624	13	182,46,115,99,66,89,36,931,83,81,69,150,15046,	0,1229,2511,5012,5319,8223,21634,24480,34426,37382,46881,81759,88046,
#Partially deleted in new
chr1	92299084	92324084	chr1:92299084-92324084	0	+	92299084	92299084	8553170	7	62,46,99,66,89,36,640,	0,1109,4892,5199,8103,21514,24360,
#Partially deleted in new
chr1	92333241	92387233	chr1:92333241-92387233	0	+	92333241	92333241	8553170	5	232,81,69,150,223,	0,3105,12604,47482,53769,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	92402388	92402685	chr1:92402388-92402685	3	-	92402388	92402388	8553170	1	297,	0,
#Partially deleted in new
chr1	92474761	92483954	chr1:92474761-92483954	1	-	92476028	92483487	789624	7	1446,166,138,488,183,214,220,	0,3826,5586,5839,8102,8611,8973,
#Partially deleted in new
chr1	92474761	92486071	chr1:92474761-92486071	1	-	92476028	92483487	789624	7	1446,166,138,488,183,214,58,	0,3826,5586,5839,8102,8611,11252,
#Partially deleted in new
chr1	92474763	92486876	chr1:92474763-92486876	3	-	92476028	92483487	789624	7	1444,166,138,488,183,214,151,	0,3824,5584,5837,8100,8609,11962,
#Partially deleted in new
chr1	92482989	92484682	chr1:92482989-92484682	0	-	92482989	92482989	8553170	3	57,214,237,	0,383,1456,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	92508695	92792404	chr1:92508695-92792404	3	-	92513655	92792394	789624	18	5275,96,96,147,159,141,135,54,61,98,90,144,126,75,225,190,230,61,	0,54946,96611,98885,115480,117098,127506,157243,168462,185106,185603,186614,189164,193445,194699,195859,227702,283648,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	92508695	92792404	chr1:92508695-92792404	1	-	92513655	92792394	789624	19	5275,96,96,147,159,141,135,33,54,61,98,90,144,126,75,225,190,230,61,	0,54946,96611,98885,115480,117098,127506,154724,157243,168462,185106,185603,186614,189164,193445,194699,195859,227702,283648,
#Partially deleted in new
chr1	92563641	92665955	chr1:92563641-92665955	0	-	92563641	92665955	789624	9	96,96,147,159,141,135,147,33,17,	0,41665,43939,60534,62152,72560,99077,99778,102297,
#Deleted in new
chr1	92580475	92580821	chr1:92580475-92580821	7	-	92580475	92580475	16724991	1	346,	0,
#Partially deleted in new
chr1	92607448	92625934	chr1:92607448-92625934	0	-	92607448	92607448	8553170	3	279,159,141,	0,16727,18345,
#Partially deleted in new
chr1	92607615	92677177	chr1:92607615-92677177	0	-	92607615	92607615	8553170	7	112,159,141,135,33,54,20,	0,16560,18178,28586,55804,58323,69542,
#Partially deleted in new
chr1	92625689	92677218	chr1:92625689-92677218	0	-	92625689	92625689	8553170	4	245,135,54,61,	0,10512,40249,51468,
#Deleted in new
chr1	92647047	92647630	chr1:92647047-92647630	7	-	92647047	92647047	16724991	1	583,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	92700818	92700934	chr1:92700818-92700934	3	-	92700818	92700818	8553170	1	116,	0,
#Partially deleted in new
chr1	92703857	92785106	chr1:92703857-92785106	0	-	92703857	92703857	8553170	3	64,190,271,	0,697,80978,
#Partially deleted in new
chr1	92731999	92733257	chr1:92731999-92733257	7	+	92731999	92731999	16724991	2	616,181,	0,1077,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	92736559	92784966	chr1:92736559-92784966	0	-	92736559	92736559	8553170	3	68,122,131,	0,37346,48276,
#Deleted in new
chr1	92749174	92749330	chr1:92749174-92749330	7	-	92749174	92749174	16724991	1	156,	0,
#Deleted in new
chr1	92755793	92756956	chr1:92755793-92756956	7	+	92755793	92755793	16724991	1	1163,	0,
#Partially deleted in new
chr1	92831982	92841924	chr1:92831982-92841924	3	+	92832114	92841865	0	8	135,70,116,135,203,178,89,159,	0,1406,1562,2796,4207,5473,8568,9783,
#Partially deleted in new
chr1	92832012	92841835	chr1:92832012-92841835	0	+	92833621	92841835	789624	7	105,116,135,203,178,89,70,	0,1532,2766,4177,5443,8538,9753,
#Partially deleted in new
chr1	92832039	92841924	chr1:92832039-92841924	1	+	92832114	92841865	0	8	78,70,116,135,203,178,89,159,	0,1349,1505,2739,4150,5416,8511,9726,
#Partially deleted in new
chr1	92832056	92841923	chr1:92832056-92841923	1	+	92832114	92841865	789624	6	61,70,116,135,89,158,	0,1332,1488,2722,8494,9709,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	92832063	92836354	chr1:92832063-92836354	0	+	92832114	92833798	789624	6	54,70,116,154,135,165,	0,1325,1481,1732,2715,4126,
#Partially deleted in new
chr1	92832085	92835293	chr1:92832085-92835293	0	+	92832085	92832085	8553170	4	32,70,116,515,	0,1303,1459,2693,
#Partially deleted in new
chr1	92832108	92837469	chr1:92832108-92837469	0	+	92833621	92837469	789624	6	143,70,116,135,203,14,	0,1280,1436,2670,4081,5347,
#Partially deleted in new
chr1	92832736	92961522	chr1:92832736-92961522	1	-	92833019	92961429	789624	5	298,177,108,135,147,	0,14446,18111,43559,128639,
#Partially deleted in new
chr1	92832761	92836271	chr1:92832761-92836271	0	+	92832761	92832761	8553170	3	899,135,82,	0,2017,3428,
#Partially deleted in new
chr1	92834855	92837785	chr1:92834855-92837785	0	+	92834855	92834855	8553170	3	58,203,330,	0,1334,2600,
#Partially deleted in new
chr1	92836609	92841862	chr1:92836609-92841862	0	+	92836609	92836609	8553170	3	1024,89,97,	0,3941,5156,
#Deleted in new
chr1	92837288	92837383	chr1:92837288-92837383	3	+	92837288	92837288	789624	1	95,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	92840273	92840606	chr1:92840273-92840606	0	+	92840273	92840273	8553170	2	227,50,	0,283,
#Partially deleted in new
chr1	92840524	92841921	chr1:92840524-92841921	0	+	92840524	92840524	8553170	2	115,156,	0,1241,
#Deleted in new
chr1	92840718	92840851	chr1:92840718-92840851	3	+	92840718	92840718	789624	1	133,	0,
#Partially deleted in new
chr1	92842159	92877150	chr1:92842159-92877150	1	-	92843382	92876409	789624	5	2036,177,108,135,190,	0,5023,8688,34136,34801,
#Partially deleted in new
chr1	92842159	92961522	chr1:92842159-92961522	1	-	92843382	92961429	789624	4	2036,177,108,147,	0,5023,8688,119216,
#Partially deleted in new
chr1	92842159	92961522	chr1:92842159-92961522	1	-	92843382	92961429	789624	4	2036,108,135,147,	0,8688,34136,119216,
#Partially deleted in new
chr1	92842166	92961500	chr1:92842166-92961500	3	-	92843382	92961429	789624	5	2029,177,108,135,125,	0,5016,8681,34129,119209,
#Deleted in new
chr1	92846058	92846182	chr1:92846058-92846182	3	+	92846058	92846058	8553170	1	124,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	92930695	92934098	chr1:92930695-92934098	7	+	92930695	92930695	16724991	1	3403,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	92931344	92932091	chr1:92931344-92932091	5	+	92931344	92931344	16724991	2	91,513,	0,234,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	92969603	92969710	chr1:92969603-92969710	3	-	92969603	92969603	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	92974826	92975114	chr1:92974826-92975114	3	-	92974826	92974826	8553170	1	288,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	93010256	93010351	chr1:93010256-93010351	3	+	93010256	93010256	8553170	1	95,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	93026251	93026542	chr1:93026251-93026542	3	+	93026251	93026251	8553170	1	291,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	93027409	93027506	chr1:93027409-93027506	3	-	93027409	93027409	8553170	1	97,	0,
#Partially deleted in new
chr1	93079234	93139079	chr1:93079234-93139079	1	+	93114707	93137027	0	13	297,96,101,149,96,69,124,68,171,106,53,105,2410,	0,35453,35753,36235,39110,40098,41314,47997,50043,54468,54693,54856,57435,
#Partially deleted in new
chr1	93079234	93139079	chr1:93079234-93139079	1	+	93114707	93137027	0	16	297,17,102,82,96,101,149,96,69,124,68,171,106,53,105,2410,	0,30995,31092,31310,35453,35753,36235,39110,40098,41314,47997,50043,54468,54693,54856,57435,
#Partially deleted in new
chr1	93079237	93139081	chr1:93079237-93139081	3	+	93079526	93137027	0	15	294,199,82,96,101,149,96,69,124,68,171,106,53,105,2412,	0,30992,31307,35450,35750,36232,39107,40095,41311,47994,50040,54465,54690,54853,57432,
#Partially deleted in new
chr1	93079269	93115492	chr1:93079269-93115492	0	+	93079269	93079269	8553170	7	262,55,197,82,96,101,23,	0,1695,30962,31275,35418,35718,36200,
#Partially deleted in new
chr1	93079282	93119401	chr1:93079282-93119401	0	+	93079282	93079282	8553170	6	249,96,101,149,96,69,	0,35405,35705,36187,39062,40050,
#Partially deleted in new
chr1	93079295	93119338	chr1:93079295-93119338	0	+	93079295	93079295	8553170	9	236,17,102,82,96,101,149,96,6,	0,30934,31031,31249,35392,35692,36174,39049,40037,
#Partially deleted in new
chr1	93079309	93137089	chr1:93079309-93137089	0	+	93079309	93079309	8553170	14	222,199,82,96,101,149,96,69,68,171,106,53,105,420,	0,30920,31235,35378,35678,36160,39035,40023,47922,49968,54393,54618,54781,57360,
#Partially deleted in new
chr1	93079310	93137151	chr1:93079310-93137151	1	+	93079526	93137027	0	14	221,199,82,96,101,149,96,69,124,68,106,53,105,482,	0,30919,31234,35377,35677,36159,39034,40022,41238,47921,54392,54617,54780,57359,
#Partially deleted in new
chr1	93110245	93137132	chr1:93110245-93137132	0	+	93110245	93110245	8553170	14	183,86,96,101,149,96,69,124,68,171,106,53,105,463,	0,299,4442,4742,5224,8099,9087,10303,16986,19032,23457,23682,23845,26424,
#Partially deleted in new
chr1	93110423	93133740	chr1:93110423-93133740	0	+	93110423	93110423	8553170	9	5,82,96,101,149,96,69,124,38,	0,121,4264,4564,5046,7921,8909,10125,23279,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	93118344	93120274	chr1:93118344-93120274	0	+	93118344	93118344	8553170	2	96,942,	0,988,
#Partially deleted in new
chr1	93120792	93136852	chr1:93120792-93136852	0	+	93120792	93120792	8553170	7	102,68,171,106,53,105,183,	0,6439,8485,12910,13135,13298,15877,
#Partially deleted in new
chr1	93120798	93134459	chr1:93120798-93134459	0	+	93120798	93120798	8553170	6	96,68,171,106,53,369,	0,6433,8479,12904,13129,13292,
#Partially deleted in new
chr1	93128794	93137132	chr1:93128794-93137132	0	+	93128794	93128794	8553170	5	654,106,53,105,463,	0,4908,5133,5296,7875,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	93149741	93180728	chr1:93149741-93180728	3	-	93154669	93180242	789624	4	5147,184,98,675,	0,6558,10387,30312,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	93151857	93180516	chr1:93151857-93180516	0	-	93156478	93180242	789624	5	3031,184,71,98,463,	0,4442,6957,8271,28196,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	93154195	93163210	chr1:93154195-93163210	0	-	93154195	93154195	8553170	3	693,184,3082,	0,2104,5933,
#Partially deleted in new
chr1	93154231	93180361	chr1:93154231-93180361	1	-	93154826	93180242	789624	5	657,49,184,98,308,	0,1804,2068,5897,25822,
#Partially deleted in new
chr1	93156039	93180261	chr1:93156039-93180261	1	-	93156281	93180242	789624	3	444,98,208,	0,4089,24014,
#Partially deleted in new
chr1	93179918	93278477	chr1:93179918-93278477	3	+	93183361	93278477	789624	29	500,136,169,159,107,129,97,122,292,125,161,221,111,132,135,78,117,168,143,164,214,100,117,144,204,138,201,468,15,	0,3441,4059,6426,12081,13697,21973,25591,27188,30883,32182,34827,36717,37819,41690,41940,46414,52507,56329,59391,59764,66186,66919,74552,76416,78829,84782,90428,98544,
#Partially deleted in new
chr1	93179929	93186400	chr1:93179929-93186400	0	+	93179929	93179929	8553170	3	350,136,56,	0,3430,6415,
#Partially deleted in new
chr1	93180362	93278607	chr1:93180362-93278607	1	+	93183361	93278477	789624	28	520,136,169,159,107,129,97,122,292,125,161,224,111,132,135,78,117,168,143,164,214,100,117,144,204,138,201,145,	0,2997,3615,5982,11637,13253,21529,25147,26744,30439,31738,34380,36273,37375,41246,41496,45970,52063,55885,58947,59320,65742,66475,74108,75972,78385,84338,98100,
#Partially deleted in new
chr1	93180715	93186398	chr1:93180715-93186398	0	+	93180715	93186398	789624	4	137,136,169,54,	0,2644,3262,5629,
#Partially deleted in new
chr1	93180723	93278730	chr1:93180723-93278730	0	+	93180723	93278477	789624	29	159,136,169,159,107,129,97,122,292,125,161,221,111,132,135,78,117,168,143,164,214,100,117,144,204,138,201,468,268,	0,2636,3254,5621,11276,12892,21168,24786,26383,30078,31377,34022,35912,37014,40885,41135,45609,51702,55524,58586,58959,65381,66114,73747,75611,78024,83977,89623,97739,
#Partially deleted in new
chr1	93180758	93193660	chr1:93180758-93193660	0	+	93180758	93186402	789624	5	94,136,159,107,45,	0,2601,5586,11241,12857,
#Partially deleted in new
chr1	93180768	93216679	chr1:93180768-93216679	0	+	93180768	93212106	789624	12	114,136,169,159,107,129,97,122,292,161,221,44,	0,2591,3209,5576,11231,12847,21123,24741,26338,31332,33977,35867,
#Deleted in new
chr1	93190739	93191060	chr1:93190739-93191060	7	-	93190739	93190739	16724991	1	321,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	93199754	93199939	chr1:93199754-93199939	7	-	93199754	93199754	16724991	1	185,	0,
#Partially deleted in new
chr1	93205554	93246892	chr1:93205554-93246892	0	+	93205554	93246892	789624	15	77,292,125,161,221,111,135,78,117,168,143,164,214,100,55,	0,1552,5247,6546,9191,11081,16054,16304,20778,26871,30693,33755,34128,40550,41283,
#Partially deleted in new
chr1	93221664	93239473	chr1:93221664-93239473	0	+	93221664	93221664	8553170	5	79,78,117,168,164,	0,194,4668,10761,17645,
#Partially deleted in new
chr1	93254516	93264947	chr1:93254516-93264947	0	+	93254516	93254516	8553170	4	98,204,138,247,	0,1818,4231,10184,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	93262185	93345831	chr1:93262185-93345831	0	-	93262185	93262185	8553170	7	176,95,127,180,31,53,108,	0,62449,63583,77171,77463,78272,83538,
#Partially deleted in new
chr1	93264637	93273583	chr1:93264637-93273583	0	-	93264637	93264637	8553170	3	135,76,110,	0,5045,8836,
#Partially deleted in new
chr1	93264639	93338531	chr1:93264639-93338531	0	-	93264639	93264639	8553170	4	133,83,39,158,	0,40748,73590,73734,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	93264646	93324691	chr1:93264646-93324691	0	-	93264646	93264646	8553170	5	126,83,121,61,57,	0,40741,50502,53521,59988,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	93264649	93337469	chr1:93264649-93337469	0	-	93264649	93264649	8553170	3	123,83,93,	0,40738,72727,
#Partially deleted in new
chr1	93264650	93340472	chr1:93264650-93340472	0	-	93264650	93264650	8553170	5	122,83,180,31,15,	0,40737,74706,74998,75807,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	93264668	93309763	chr1:93264668-93309763	0	-	93264668	93264668	8553170	4	104,122,83,49,	0,25896,40719,45046,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	93264671	93315269	chr1:93264671-93315269	0	-	93264671	93264671	8553170	4	101,122,83,121,	0,25893,40716,50477,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	93264675	93337392	chr1:93264675-93337392	0	-	93264675	93264675	8553170	5	97,83,95,127,16,	0,40712,59959,61093,72701,
#Deleted in new
chr1	93278960	93279129	chr1:93278960-93279129	7	-	93278960	93278960	16724991	1	169,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	93305110	93339374	chr1:93305110-93339374	0	-	93305110	93305110	8553170	4	360,95,127,18,	0,19524,20658,34246,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	93311168	93345811	chr1:93311168-93345811	1	-	93311168	93311168	789624	9	440,95,127,61,1898,180,31,53,88,	0,13466,14600,15433,26208,28188,28480,29289,34555,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	93311279	93337437	chr1:93311279-93337437	0	-	93311279	93311279	8553170	4	329,25,77,61,	0,3869,14539,26097,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	93311484	93337565	chr1:93311484-93337565	0	-	93311484	93311484	8553170	4	124,95,127,189,	0,13150,14284,25892,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	93324705	93345803	chr1:93324705-93345803	0	-	93324705	93324705	8553170	8	24,127,61,119,180,31,53,80,	0,1063,1896,14450,14651,14943,15752,21018,
#Partially deleted in new
chr1	93338694	93345848	chr1:93338694-93345848	0	-	93338694	93338694	8553170	5	580,180,31,53,125,	0,662,954,1763,7029,
#Partially deleted in new
chr1	93338914	93345800	chr1:93338914-93345800	0	-	93338914	93338914	8553170	6	360,180,31,53,51,77,	0,442,734,1543,6625,6809,
#Partially deleted in new
chr1	93338928	93345783	chr1:93338928-93345783	0	-	93338928	93338928	8553170	5	346,180,31,53,138,	0,428,720,1529,6717,
#Partially deleted in new
chr1	93338937	93345846	chr1:93338937-93345846	0	-	93338937	93338937	8553170	4	599,31,53,123,	0,711,1520,6786,
#Partially deleted in new
chr1	93338938	93345827	chr1:93338938-93345827	0	-	93338938	93338938	8553170	3	336,180,104,	0,418,6785,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	93345887	93369498	chr1:93345887-93369498	3	+	93346645	93360639	0	3	978,164,9006,	0,8020,14605,
#Partially deleted in new
chr1	93345934	93361168	chr1:93345934-93361168	1	+	93346645	93360639	0	4	254,553,164,676,	0,378,7973,14558,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	93354974	93360935	chr1:93354974-93360935	0	+	93354974	93354974	8553170	2	801,443,	0,5518,
#Deleted in new
chr1	93384486	93384998	chr1:93384486-93384998	7	-	93384486	93384486	16724991	1	512,	0,
#Partially deleted in new
chr1	93448130	93554659	chr1:93448130-93554659	1	+	93448281	93551125	789624	14	175,116,54,148,63,105,129,147,204,110,133,95,149,3713,	0,51337,73951,75213,76130,81521,82624,84791,86574,95976,98711,99216,101147,102816,
#Partially deleted in new
chr1	93448130	93554659	chr1:93448130-93554659	3	+	93448281	93552416	789624	17	175,116,54,148,63,105,129,147,204,159,15,110,133,95,149,159,2251,	0,51337,73951,75213,76130,81521,82624,84791,86574,88201,92911,95976,98711,99216,101147,102816,104278,
#Partially deleted in new
chr1	93448281	93554661	chr1:93448281-93554661	1	+	93448281	93552416	789624	15	24,116,54,148,63,105,129,147,204,110,133,95,149,159,2253,	0,51186,73800,75062,75979,81370,82473,84640,86423,95825,98560,99065,100996,102665,104127,
#Partially deleted in new
chr1	93448281	93551125	chr1:93448281-93551125	1	+	93448281	93551125	789624	16	24,116,54,148,63,105,129,147,204,159,15,110,133,95,149,179,	0,51186,73800,75062,75979,81370,82473,84640,86423,88050,92760,95825,98560,99065,100996,102665,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	93488332	93488452	chr1:93488332-93488452	7	-	93488332	93488332	16724991	1	120,	0,
#Partially deleted in new
chr1	93529709	93552579	chr1:93529709-93552579	0	+	93529709	93552416	789624	12	47,129,147,204,159,15,110,133,95,149,159,171,	0,1045,3212,4995,6622,11332,14397,17132,17637,19568,21237,22699,
#Partially deleted in new
chr1	93543825	93549314	chr1:93543825-93549314	0	+	93543825	93543825	8553170	4	391,133,95,37,	0,3016,3521,5452,
#Partially deleted in new
chr1	93561785	93614097	chr1:93561785-93614097	1	-	93562240	93613930	0	10	634,213,112,172,116,653,104,443,129,251,	0,5493,5954,9884,14228,20515,22232,27191,30479,52061,
#Partially deleted in new
chr1	93561786	93585082	chr1:93561786-93585082	1	-	93562240	93584078	0	8	633,213,112,172,116,653,104,111,	0,5492,5953,9883,14227,20514,22231,23185,
#Partially deleted in new
chr1	93561790	93681829	chr1:93561790-93681829	1	-	93562240	93674930	0	12	629,213,112,172,116,653,104,443,129,40,328,232,	0,5488,5949,9879,14223,20510,22227,27186,30474,80513,112823,119807,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	93561790	93847150	chr1:93561790-93847150	3	-	93562240	93674930	0	14	629,213,112,172,116,653,104,443,129,40,328,51,146,81,	0,5488,5949,9879,14223,20510,22227,27186,30474,80513,112823,144301,283776,285279,
#Partially deleted in new
chr1	93561793	93681370	chr1:93561793-93681370	1	-	93562240	93674930	0	12	626,213,112,172,116,653,104,443,129,40,328,264,	0,5485,5946,9876,14220,20507,22224,27183,30471,80510,112820,119313,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	93562120	93568127	chr1:93562120-93568127	0	-	93562120	93562120	8553170	3	299,213,388,	0,5158,5619,
#Partially deleted in new
chr1	93582300	93585101	chr1:93582300-93585101	0	-	93582300	93582300	8553170	3	653,104,130,	0,1717,2671,
#Partially deleted in new
chr1	93589082	93590378	chr1:93589082-93590378	0	-	93589082	93589082	8553170	2	337,130,	0,1166,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	93592198	93594784	chr1:93592198-93594784	1	+	93592198	93592198	8553170	2	310,412,	0,2174,
#Partially deleted in new
chr1	93592249	93605573	chr1:93592249-93605573	0	+	93592249	93592249	8553170	3	259,77,168,	0,2123,13156,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	93592249	93602440	chr1:93592249-93602440	3	+	93592249	93592249	8553170	3	259,77,303,	0,2123,9888,
#Partially deleted in new
chr1	93594384	93600762	chr1:93594384-93600762	0	+	93594384	93594384	8553170	2	65,107,	0,6271,
#Partially deleted in new
chr1	93594389	93599740	chr1:93594389-93599740	1	+	93594389	93594389	8553170	3	60,74,580,	0,4527,4771,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	93720188	93845712	chr1:93720188-93845712	0	-	93720188	93720188	8553170	3	106,238,146,	0,3110,125378,
#Partially deleted in new
chr1	93752923	93775444	chr1:93752923-93775444	0	-	93752923	93752923	8553170	2	1423,248,	0,22273,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	93753102	93847044	chr1:93753102-93847044	0	-	93753102	93753102	8553170	4	1244,73,146,80,	0,74512,92464,93862,
#Deleted in new
chr1	93846831	93846911	chr1:93846831-93846911	3	+	93846831	93846831	5263520	1	80,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	93847173	93848939	chr1:93847173-93848939	3	+	93847173	93847173	8553170	1	1766,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	93866282	93879206	chr1:93866282-93879206	3	-	93869850	93879148	789624	7	3662,110,165,96,139,1595,130,	0,4400,5789,6836,9362,9985,12794,
#Partially deleted in new
chr1	93869779	93870997	chr1:93869779-93870997	0	-	93869779	93869779	8553170	2	165,315,	0,903,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	93869779	93873369	chr1:93869779-93873369	0	-	93869779	93869779	8553170	4	165,110,165,251,	0,903,2292,3339,
#Partially deleted in new
chr1	93869797	93879162	chr1:93869797-93879162	0	-	93872193	93879148	789624	6	147,110,165,96,1595,86,	0,885,2274,3321,6470,9279,
#Partially deleted in new
chr1	93875665	93879918	chr1:93875665-93879918	0	-	93875665	93875665	8553170	3	118,1595,1371,	0,602,2882,
#Partially deleted in new
chr1	93876758	93879156	chr1:93876758-93879156	0	-	93876758	93876758	8553170	2	731,80,	0,2318,
#Partially deleted in new
chr1	93877472	93879164	chr1:93877472-93879164	0	-	93877472	93879148	789624	2	411,88,	0,1604,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	93885204	93909410	chr1:93885204-93909410	3	-	93888989	93909163	789624	7	3955,115,203,60,85,66,373,	0,9409,11413,12634,16380,19318,23833,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	93887033	93909456	chr1:93887033-93909456	1	-	93888989	93909163	789624	6	2126,115,203,60,85,419,	0,7580,9584,10805,14551,22004,
#Partially deleted in new
chr1	93894643	93908790	chr1:93894643-93908790	0	-	93894643	93894643	8553170	6	85,203,60,85,66,126,	0,1974,3195,6941,9879,14021,
#Partially deleted in new
chr1	93904265	93908924	chr1:93904265-93908924	0	-	93904265	93904265	8553170	2	323,260,	0,4399,
#Deleted in new
chr1	93921267	93921667	chr1:93921267-93921667	7	-	93921267	93921267	16724991	1	400,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	93922573	93923945	chr1:93922573-93923945	7	-	93922573	93922573	16724991	2	967,91,	0,1281,
#Partially deleted in new
chr1	93924385	93924716	chr1:93924385-93924716	7	-	93924385	93924385	16724991	1	331,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	93924742	93925385	chr1:93924742-93925385	7	-	93924742	93924742	16724991	1	643,	0,
#Deleted in new
chr1	93925405	93926072	chr1:93925405-93926072	7	-	93925405	93925405	16724991	1	667,	0,
#Deleted in new
chr1	93926031	93926188	chr1:93926031-93926188	7	-	93926031	93926031	16724991	1	157,	0,
#Partially deleted in new
chr1	93926614	93927569	chr1:93926614-93927569	7	-	93926614	93926614	16724991	2	499,178,	0,777,
#Deleted in new
chr1	93927713	93928302	chr1:93927713-93928302	7	-	93927713	93927713	16724991	1	589,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	93934478	93935244	chr1:93934478-93935244	7	-	93934478	93934478	16724991	1	766,	0,
#Partially deleted in new
chr1	93992834	94063249	chr1:93992834-94063249	1	-	93993236	94037333	789624	28	408,87,250,93,104,135,142,107,63,121,130,124,148,116,178,170,75,106,33,95,187,99,125,266,49,206,47,76,	0,3274,5026,8001,8167,9023,12606,14799,15400,15916,17965,18427,21708,22904,26747,28405,28805,29011,30551,32119,36610,37593,38161,38943,43905,44310,47208,70339,
#Partially deleted in new
chr1	93992836	94121132	chr1:93992836-94121132	3	-	93993236	94121045	789624	50	406,87,250,93,104,135,142,107,63,121,130,124,148,116,178,170,75,106,33,95,187,99,125,266,49,206,85,194,138,140,132,175,90,66,205,222,223,177,206,198,117,140,241,90,198,128,140,142,94,153,	0,3272,5024,7999,8165,9021,12604,14797,15398,15914,17963,18425,21706,22902,26745,28403,28803,29009,30549,32117,36608,37591,38159,38941,43903,44308,47206,48372,49924,50499,51776,54082,56031,58796,62274,63764,67700,69740,70275,84853,85753,86485,87641,90515,105957,110178,115740,118601,120136,128143,
#Partially deleted in new
chr1	94001507	94010929	chr1:94001507-94010929	0	-	94001507	94001507	8553170	6	485,142,107,63,121,130,	0,3933,6126,6727,7243,9292,
#Partially deleted in new
chr1	94005374	94007752	chr1:94005374-94007752	0	-	94005374	94005374	8553170	2	208,119,	0,2259,
#Deleted in new
chr1	94019399	94021367	chr1:94019399-94021367	0	-	94019399	94019399	8553170	2	360,128,	0,1840,
#Deleted in new
chr1	94019581	94025595	chr1:94019581-94025595	0	-	94019581	94019581	8553170	7	178,170,75,106,33,95,33,	0,1658,2058,2264,3804,5372,5981,
#Partially deleted in new
chr1	94045636	94121125	chr1:94045636-94121125	1	-	94045721	94121045	8553170	19	329,175,90,66,205,223,177,206,198,117,140,241,90,198,128,140,142,94,146,	0,1282,3231,5996,9474,14900,16940,17475,32053,32953,33685,34841,37715,53157,57378,62940,65801,67336,75343,
#Deleted in new
chr1	94059468	94061439	chr1:94059468-94061439	0	-	94059468	94059468	8553170	3	190,223,57,	0,1068,1914,
#Deleted in new
chr1	94145110	94145619	chr1:94145110-94145619	3	+	94145110	94145110	8553170	2	103,249,	0,260,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	94148987	94154829	chr1:94148987-94154829	0	-	94148987	94148987	8553170	2	1528,279,	0,5563,
#Partially deleted in new
chr1	94149846	94275068	chr1:94149846-94275068	0	-	94154591	94231611	789624	26	37,164,98,146,109,316,233,138,189,140,99,105,137,158,138,189,81,111,65,138,49,73,97,135,237,57,	0,505,4704,24757,27765,28005,29878,34304,35025,35495,36652,38990,39369,40079,51873,52697,53071,53253,54083,55214,55788,58985,59407,70411,81560,125165,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	94150737	94151080	chr1:94150737-94151080	3	+	94150737	94150737	8553170	1	343,	0,
#Partially deleted in new
chr1	94171750	94237565	chr1:94171750-94237565	3	-	94173868	94231611	789624	23	2999,109,316,233,138,189,140,99,105,137,158,138,189,81,111,65,138,49,73,97,135,237,151,	0,5861,6101,7974,12400,13121,13591,14748,17086,17465,18175,29969,30793,31167,31349,32179,33310,33884,37081,37503,48507,59656,65664,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	94176612	94195940	chr1:94176612-94195940	0	-	94176612	94176612	8553170	10	1108,316,233,138,189,140,99,105,137,6015,	0,1239,3112,7538,8259,8729,9886,12224,12603,13313,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	94201894	94237633	chr1:94201894-94237633	1	-	94202504	94231611	789624	11	838,81,111,65,138,49,73,97,135,237,219,	0,1023,1205,2035,3166,3740,6937,7359,18363,29512,35520,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	94247865	94334848	chr1:94247865-94334848	3	+	94247865	94247865	8553170	5	174,107,166,101,337,	0,1547,2513,85443,86646,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	94247865	94334848	chr1:94247865-94334848	0	+	94247865	94247865	8553170	4	269,107,101,337,	0,1547,85443,86646,
#Deleted in new
chr1	94302037	94303022	chr1:94302037-94303022	7	+	94302037	94302037	16724991	1	985,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	94318478	94324569	chr1:94318478-94324569	3	-	94318478	94318478	8553170	2	429,163,	0,5928,
#Deleted in new
chr1	94406394	94406882	chr1:94406394-94406882	7	-	94406394	94406394	16724991	1	488,	0,
#Partially deleted in new
chr1	94418454	94518663	chr1:94418454-94518663	3	+	94418478	94517129	789624	23	134,37,99,89,70,98,124,57,143,70,70,98,92,92,73,64,78,66,90,120,105,57,1612,	0,40152,46320,49464,55311,56688,57159,59804,62009,64715,69087,69239,69437,71270,71448,72729,80147,80328,80490,81040,88083,96691,98597,
#Partially deleted in new
chr1	94418454	94475240	chr1:94418454-94475240	0	+	94418478	94475240	8553170	6	134,37,99,89,70,98,	0,40152,46320,49464,53718,56688,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	94418478	94478723	chr1:94418478-94478723	1	+	94418478	94478550	789624	9	110,37,99,89,70,98,124,57,200,	0,40128,46296,49440,55287,56664,57135,59780,60045,
#Partially deleted in new
chr1	94418830	94475694	chr1:94418830-94475694	0	+	94418830	94418830	8553170	8	121,66,37,99,89,70,98,81,	0,13756,39776,45944,49088,54935,56312,56783,
#Partially deleted in new
chr1	94480221	94487791	chr1:94480221-94487791	0	+	94480221	94480221	8553170	4	385,70,70,98,	0,2948,7320,7472,
#Partially deleted in new
chr1	94481492	94518666	chr1:94481492-94518666	0	+	94481492	94481492	8553170	14	1747,70,98,92,92,73,64,78,66,90,120,105,57,1615,	0,6049,6201,6399,8232,8410,9691,17109,17290,17452,18002,25045,33653,35559,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	94513473	94518496	chr1:94513473-94518496	0	+	94513473	94513473	8553170	2	1729,1445,	0,3578,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	94529224	94541800	chr1:94529224-94541800	3	-	94530459	94541636	0	6	1372,160,179,200,112,264,	0,3096,3865,6740,11032,12312,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	94529309	94541637	chr1:94529309-94541637	1	-	94530470	94541636	0	5	1287,179,200,112,101,	0,3780,6655,10947,12227,
#Partially deleted in new
chr1	94532996	94536164	chr1:94532996-94536164	0	-	94532996	94532996	8553170	2	272,200,	0,2968,
#Partially deleted in new
chr1	94533105	94541759	chr1:94533105-94541759	0	-	94533105	94533105	8553170	5	163,200,112,495,223,	0,2859,7151,7466,8431,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	94585555	94592297	chr1:94585555-94592297	3	-	94585555	94585555	8553170	2	1207,964,	0,5778,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	94613813	94820277	chr1:94613813-94820277	7	-	94613813	94613813	16724991	6	3258,1891,122,183,180,322,	0,8905,24623,65611,118444,206142,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	94616352	94820311	chr1:94616352-94820311	4	-	94616352	94616352	16724991	6	719,1891,122,183,52,356,	0,6366,22084,63072,153909,203603,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	94616376	94820266	chr1:94616376-94820266	4	-	94616376	94616376	16724991	7	695,182,731,122,183,180,311,	0,6342,7502,22060,63048,115881,203579,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	94616389	94820059	chr1:94616389-94820059	4	-	94616389	94616389	16724991	5	682,1891,122,183,104,	0,6329,22047,63035,203566,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	94616391	94820157	chr1:94616391-94820157	4	-	94616391	94616391	16724991	6	680,182,731,122,183,202,	0,6327,7487,22045,63033,203564,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	94616405	94855421	chr1:94616405-94855421	4	-	94616405	94616405	16724991	6	666,182,1084,122,183,178,	0,6313,7120,22031,63019,238838,
#Deleted in new
chr1	94621150	94624184	chr1:94621150-94624184	4	-	94621150	94621150	16724991	2	806,1466,	0,1568,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	94638460	94820096	chr1:94638460-94820096	4	-	94638460	94638460	16724991	5	98,183,180,146,141,	0,40964,93797,103808,181495,
#Deleted in new
chr1	94650543	94651378	chr1:94650543-94651378	7	-	94650543	94650543	16724991	1	835,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	94657532	94820281	chr1:94657532-94820281	4	-	94657532	94657532	16724991	5	523,183,119,180,326,	0,21892,47906,74725,162423,
#Deleted in new
chr1	94657924	94658250	chr1:94657924-94658250	4	-	94657924	94657924	16724991	2	131,45,	0,281,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	94672896	94732345	chr1:94672896-94732345	4	-	94672896	94672896	16724991	3	375,183,88,	0,6528,59361,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	94672917	94674161	chr1:94672917-94674161	5	-	94672917	94672917	16724991	2	377,235,	0,1009,
#Partially deleted in new
chr1	94673128	94820219	chr1:94673128-94820219	4	-	94673128	94673128	16724991	4	143,183,119,264,	0,6296,32310,146827,
#Partially deleted in new
chr1	94679424	94820210	chr1:94679424-94820210	4	-	94679424	94679424	16724991	2	183,255,	0,140531,
#Partially deleted in new
chr1	94679579	94820219	chr1:94679579-94820219	4	-	94679579	94679579	16724991	6	28,119,180,146,156,264,	0,25859,52678,62689,64258,140376,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	94731742	94820192	chr1:94731742-94820192	4	-	94731742	94731742	16724991	5	695,461,124,52,237,	0,10526,12095,38519,88213,
#Partially deleted in new
chr1	94732132	94742495	chr1:94732132-94742495	4	-	94732132	94732132	16724991	2	305,227,	0,10136,
#Deleted in new
chr1	94745859	94745900	chr1:94745859-94745900	3	-	94745859	94745859	5263520	1	41,	0,
#Partially deleted in new
chr1	94820341	94895052	chr1:94820341-94895052	1	+	94820451	94894922	789624	14	137,143,137,94,161,90,125,187,166,157,87,138,237,235,	0,4151,7165,8151,17369,19606,21658,24936,36993,44401,46989,70788,71939,74476,
#Partially deleted in new
chr1	94820349	94895246	chr1:94820349-94895246	1	+	94820451	94894922	789624	15	129,108,143,137,94,161,90,125,187,166,157,87,138,237,429,	0,599,4143,7157,8143,17361,19598,21650,24928,36985,44393,46981,70780,71931,74468,
#Partially deleted in new
chr1	94820396	94895052	chr1:94820396-94895052	1	+	94820451	94894922	789624	14	82,143,41,94,161,90,125,187,166,157,87,138,237,235,	0,4096,7110,8096,17314,19551,21603,24881,36938,44346,46934,70733,71884,74421,
#Partially deleted in new
chr1	94820400	94895053	chr1:94820400-94895053	1	+	94820451	94894922	789624	15	78,108,143,41,94,161,90,125,187,166,157,84,138,237,236,	0,548,4092,7106,8092,17310,19547,21599,24877,36934,44342,46933,70729,71880,74417,
#Partially deleted in new
chr1	94820620	94895053	chr1:94820620-94895053	3	+	94824501	94894922	789624	14	103,143,137,94,161,90,125,187,166,157,87,138,237,236,	0,3872,6886,7872,17090,19327,21379,24657,36714,44122,46710,70509,71660,74197,
#Partially deleted in new
chr1	94820645	94837834	chr1:94820645-94837834	0	+	94824501	94837834	789624	6	78,108,143,137,94,124,	0,303,3847,6861,7847,17065,
#Partially deleted in new
chr1	94820649	94895029	chr1:94820649-94895029	1	+	94824501	94894922	789624	14	74,143,41,94,161,90,125,187,166,157,87,138,237,212,	0,3843,6857,7843,17061,19298,21350,24628,36685,44093,46681,70480,71631,74168,
#Partially deleted in new
chr1	94824493	94895053	chr1:94824493-94895053	0	+	94824493	94825941	789624	14	142,110,137,94,161,90,125,187,166,157,87,138,237,236,	0,1339,3013,3999,13217,15454,17506,20784,32841,40249,42837,66636,67787,70324,
#Partially deleted in new
chr1	94827438	94891204	chr1:94827438-94891204	0	+	94827438	94827438	8553170	12	109,94,161,90,125,187,166,157,87,35,157,75,	0,1054,10272,12509,14561,17839,29896,37304,39892,61219,61760,63691,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	94836747	94855426	chr1:94836747-94855426	5	-	94836747	94836747	16724991	4	156,119,239,183,	0,2175,6608,18496,
#Partially deleted in new
chr1	94843107	94855426	chr1:94843107-94855426	5	-	94843107	94843107	16724991	2	487,183,	0,12136,
#Partially deleted in new
chr1	94867330	94895052	chr1:94867330-94895052	0	+	94867330	94894922	789624	3	87,138,235,	0,23799,27487,
#Partially deleted in new
chr1	94896948	94927223	chr1:94896948-94927223	1	-	94897741	94926894	789624	6	1135,147,117,67,122,386,	0,2422,4720,6173,6454,29889,
#Partially deleted in new
chr1	94896948	94925808	chr1:94896948-94925808	1	-	94897741	94903458	789624	7	1135,147,117,138,67,122,176,	0,2422,4720,5172,6173,6454,28684,
#Partially deleted in new
chr1	94896950	94927278	chr1:94896950-94927278	3	-	94897741	94926894	789624	7	1133,147,117,138,67,122,441,	0,2420,4718,5170,6171,6452,29887,
#Partially deleted in new
chr1	94897867	94901873	chr1:94897867-94901873	0	-	94897867	94897867	8553170	3	216,147,205,	0,1503,3801,
#Partially deleted in new
chr1	94897946	94903321	chr1:94897946-94903321	0	-	94897946	94897946	8553170	5	137,147,117,138,200,	0,1424,3722,4174,5175,
#Partially deleted in new
chr1	94898051	94925801	chr1:94898051-94925801	0	-	94898051	94903458	789624	7	32,147,117,138,67,122,169,	0,1319,3617,4069,5070,5351,27581,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	94902177	94924447	chr1:94902177-94924447	0	-	94902177	94902177	8553170	4	81,67,122,274,	0,944,1225,21996,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	94927565	94963270	chr1:94927565-94963270	0	+	94927565	94927565	8553170	4	60,52,114,292,	0,785,4306,35413,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	94928027	94963270	chr1:94928027-94963270	3	+	94928027	94928027	789624	4	375,114,117,346,	0,3844,33289,34897,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	94961324	94963270	chr1:94961324-94963270	0	+	94961324	94961324	8553170	2	109,292,	0,1654,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	94974406	95072945	chr1:94974406-95072945	3	-	94983075	95072898	789624	4	8900,132,152,183,	0,52722,90459,98356,
#Partially deleted in new
chr1	94983549	95027203	chr1:94983549-95027203	0	-	94983549	94983549	8553170	2	84,75,	0,43579,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	95035820	95072874	chr1:95035820-95072874	0	-	95035820	95035820	8553170	4	62,120,152,112,	0,5672,29045,36942,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	95061595	95067545	chr1:95061595-95067545	3	+	95061595	95061595	789624	2	594,502,	0,5448,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	95117337	95197607	chr1:95117337-95197607	3	+	95143901	95191868	789624	7	280,166,90,59,95,74,6058,	0,26553,31364,32870,33987,56478,74212,
#Partially deleted in new
chr1	95117438	95173878	chr1:95117438-95173878	0	+	95143901	95173878	789624	7	389,130,166,90,59,95,63,	0,3616,26452,31263,32769,33886,56377,
#Partially deleted in new
chr1	95117922	95173845	chr1:95117922-95173845	0	+	95143901	95173845	789624	6	169,166,90,59,95,30,	0,25968,30779,32285,33402,55893,
#Partially deleted in new
chr1	95117922	95244955	chr1:95117922-95244955	3	+	95143901	95244250	789624	8	169,166,90,59,95,74,93,745,	0,25968,30779,32285,33402,55893,112979,126288,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	95120146	95138554	chr1:95120146-95138554	3	+	95120146	95120146	8553170	2	140,280,	0,18128,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	95125510	95125609	chr1:95125510-95125609	3	-	95125510	95125510	8553170	1	99,	0,
#Partially deleted in new
chr1	95140671	95150229	chr1:95140671-95150229	0	+	95140671	95140671	8553170	4	71,166,90,22,	0,3219,8030,9536,
#Partially deleted in new
chr1	95151376	95247225	chr1:95151376-95247225	0	+	95151376	95246870	789624	4	43,74,93,470,	0,22439,79525,95379,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	95163218	95233982	chr1:95163218-95233982	3	-	95163218	95163218	789624	4	1980,38,146,283,	0,41877,58467,70481,
#Partially deleted in new
chr1	95174123	95233979	chr1:95174123-95233979	0	-	95174123	95174123	8553170	4	58,38,146,280,	0,30972,47562,59576,
#Partially deleted in new
chr1	95234154	95247225	chr1:95234154-95247225	3	+	95234230	95246870	0	4	161,488,116,470,	0,10056,12387,12601,
#Partially deleted in new
chr1	95234210	95247223	chr1:95234210-95247223	1	+	95234230	95244713	0	3	105,505,468,	0,10000,12545,
#Partially deleted in new
chr1	95234213	95244411	chr1:95234213-95244411	0	+	95234213	95234213	8553170	4	102,113,133,201,	0,3134,5563,9997,
#Partially deleted in new
chr1	95234220	95247217	chr1:95234220-95247217	0	+	95234220	95234220	8553170	5	95,133,488,116,462,	0,5556,9990,12321,12535,
#Partially deleted in new
chr1	95234224	95247223	chr1:95234224-95247223	0	+	95234224	95234224	789624	5	91,34,87,116,468,	0,5552,10340,12317,12531,
#Partially deleted in new
chr1	95234267	95247220	chr1:95234267-95247220	0	+	95234267	95234267	8553170	2	48,465,	0,12488,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	95243166	95264029	chr1:95243166-95264029	0	-	95243166	95243166	8553170	3	359,94,45,	0,6188,20818,
#Partially deleted in new
chr1	95243224	95264054	chr1:95243224-95264054	3	-	95243224	95243224	8553170	2	301,70,	0,20760,
#Partially deleted in new
chr1	95243476	95278940	chr1:95243476-95278940	0	-	95243476	95243476	8553170	4	49,64,79,21,	0,20508,34568,35443,
#Deleted in new
chr1	95246057	95247223	chr1:95246057-95247223	0	+	95246057	95246057	8553170	2	600,468,	0,698,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	95248699	95264054	chr1:95248699-95264054	0	-	95248699	95248699	8553170	3	98,94,70,	0,655,15285,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	95248967	95264029	chr1:95248967-95264029	0	-	95248967	95248967	8553170	2	481,45,	0,15017,
#Partially deleted in new
chr1	95260821	95264029	chr1:95260821-95264029	0	-	95260821	95260821	8553170	2	310,45,	0,3163,
#Partially deleted in new
chr1	95310927	95318263	chr1:95310927-95318263	3	-	95310927	95310927	789624	2	266,116,	0,7220,
#Deleted in new
chr1	95351250	95352254	chr1:95351250-95352254	0	-	95351250	95351250	8553170	2	379,223,	0,781,
#Deleted in new
chr1	95351252	95352648	chr1:95351252-95352648	3	-	95351252	95351252	8553170	2	536,617,	0,779,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	95356228	95381000	chr1:95356228-95381000	0	-	95356228	95356228	8553170	3	249,185,369,	0,4452,24403,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	95356234	95380972	chr1:95356234-95380972	3	-	95356234	95356234	8553170	4	243,185,76,341,	0,4446,16346,24397,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	95474736	95479356	chr1:95474736-95479356	3	+	95474736	95474736	789624	4	439,61,237,2018,	0,577,2007,2602,
#Deleted in new
chr1	95510115	95514729	chr1:95510115-95514729	0	+	95510115	95510115	789624	2	247,579,	0,4035,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	95510166	95782342	chr1:95510166-95782342	3	+	95510166	95510166	8553170	4	196,111,232,175,	0,28415,266980,272001,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	95510339	95515464	chr1:95510339-95515464	1	+	95510339	95510339	789624	3	23,103,1314,	0,2180,3811,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	95743095	95759470	chr1:95743095-95759470	3	+	95743095	95743095	8553170	2	107,180,	0,16195,
#Partially deleted in new
chr1	95937900	96022866	chr1:95937900-96022866	3	+	95937900	95937900	8553170	2	145,334,	0,84632,
#Partially deleted in new
chr1	95991985	96022781	chr1:95991985-96022781	0	+	95991985	95991985	8553170	4	253,107,74,249,	0,417,4135,30547,
#Partially deleted in new
chr1	95991986	95995844	chr1:95991986-95995844	0	+	95991986	95991986	8553170	3	252,107,608,	0,416,3250,
#Partially deleted in new
chr1	95991988	96022880	chr1:95991988-96022880	1	+	95991988	95991988	8553170	3	521,74,348,	0,4132,30544,
#Partially deleted in new
chr1	95992011	96006329	chr1:95992011-96006329	1	+	95992011	95992011	8553170	5	227,107,74,112,137,	0,391,4109,10089,14181,
#Partially deleted in new
chr1	95992011	96022778	chr1:95992011-96022778	0	+	95992011	95992011	8553170	5	227,107,74,112,246,	0,391,4109,10089,30521,
#Partially deleted in new
chr1	95992025	96022779	chr1:95992025-96022779	0	+	95992025	95992025	8553170	6	97,107,74,82,63,247,	0,377,4095,11337,14337,30507,
#Partially deleted in new
chr1	95992025	96022781	chr1:95992025-96022781	0	+	95992025	95992025	8553170	6	97,107,74,112,229,249,	0,377,4095,10075,14167,30507,
#Partially deleted in new
chr1	95992025	96022781	chr1:95992025-96022781	0	+	95992025	95992025	8553170	2	484,249,	0,30507,
#Partially deleted in new
chr1	95992025	96022781	chr1:95992025-96022781	0	+	95992025	95992025	8553170	3	213,107,249,	0,377,30507,
#Partially deleted in new
chr1	95992031	96006265	chr1:95992031-96006265	1	+	95992031	95992031	8553170	4	478,74,112,73,	0,4089,10069,14161,
#Partially deleted in new
chr1	95992067	96022866	chr1:95992067-96022866	1	+	95992067	95992067	789624	5	55,107,74,229,334,	0,335,4053,14125,30465,
#Partially deleted in new
chr1	95992089	96022781	chr1:95992089-96022781	0	+	95992089	95992089	8553170	6	149,107,74,112,59,249,	0,313,4031,10011,14273,30443,
#Partially deleted in new
chr1	95992100	96022781	chr1:95992100-96022781	0	+	95992100	95992100	8553170	5	138,107,74,59,249,	0,302,4020,14262,30432,
#Partially deleted in new
chr1	95992440	96022779	chr1:95992440-96022779	0	+	95992440	95992440	8553170	5	69,74,229,99,247,	0,3680,13752,28857,30092,
#Partially deleted in new
chr1	95995234	96022781	chr1:95995234-96022781	0	+	95995234	95995234	8553170	3	386,74,249,	0,886,27298,
#Partially deleted in new
chr1	95996120	96022866	chr1:95996120-96022866	0	+	95996120	95996120	8553170	3	74,229,334,	0,10072,26412,
#Partially deleted in new
chr1	96010695	96022678	chr1:96010695-96022678	0	+	96010695	96010695	8553170	2	13,146,	0,11837,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	96225900	96226060	chr1:96225900-96226060	3	+	96225900	96225900	8553170	1	160,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	96254068	96374125	chr1:96254068-96374125	3	-	96254068	96254068	789624	6	1682,81,66,79,42,44,	0,49415,50204,99085,101157,120013,
#Deleted in new
chr1	96390651	96391393	chr1:96390651-96391393	7	+	96390651	96390651	16724991	1	742,	0,
#Deleted in new
chr1	96418593	96418933	chr1:96418593-96418933	7	+	96418593	96418593	16724991	1	340,	0,
#Deleted in new
chr1	96446929	96448318	chr1:96446929-96448318	7	+	96446929	96446929	16724991	1	1389,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	96583208	96583527	chr1:96583208-96583527	3	+	96583208	96583208	8553170	1	319,	0,
#Deleted in new
chr1	96584421	96584727	chr1:96584421-96584727	7	-	96584421	96584421	16724991	1	306,	0,
#Deleted in new
chr1	96678873	96679620	chr1:96678873-96679620	7	-	96678873	96678873	16724991	1	747,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	96695855	96696167	chr1:96695855-96696167	3	-	96695855	96695855	8553170	1	312,	0,
#Partially deleted in new
chr1	96721664	96813711	chr1:96721664-96813711	0	+	96721664	96721664	8553170	13	208,31,173,144,165,111,196,140,34,93,217,78,439,	0,1899,48038,49043,55920,56171,63394,83135,84754,85201,91047,91364,91608,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	96721782	96823738	chr1:96721782-96823738	1	+	96721864	96813405	0	14	90,31,76,173,144,165,111,196,140,34,93,217,78,10466,	0,1781,29642,47920,48925,55802,56053,63276,83017,84636,85083,90929,91246,91490,
#Partially deleted in new
chr1	96721791	96771475	chr1:96721791-96771475	0	+	96721791	96721791	8553170	5	81,31,76,173,768,	0,1772,29633,47911,48916,
#Partially deleted in new
chr1	96721809	96814793	chr1:96721809-96814793	1	+	96721864	96813405	0	14	63,31,76,173,144,165,111,196,155,34,93,217,78,1521,	0,1754,29615,47893,48898,55775,56026,63249,82975,84609,85056,90902,91219,91463,
#Partially deleted in new
chr1	96721809	96814793	chr1:96721809-96814793	1	+	96721864	96813405	0	14	63,31,76,173,144,165,111,196,155,34,93,217,78,1518,	0,1754,29615,47893,48898,55775,56026,63249,82975,84609,85056,90902,91219,91466,
#Partially deleted in new
chr1	96721821	96814793	chr1:96721821-96814793	3	+	96721864	96813405	0	14	51,31,76,173,144,165,111,196,140,34,93,217,78,1518,	0,1742,29603,47881,48886,55763,56014,63237,82978,84597,85044,90890,91207,91454,
#Partially deleted in new
chr1	96721821	96813488	chr1:96721821-96813488	0	+	96721821	96721821	789624	13	51,31,76,173,144,165,111,196,140,93,217,78,216,	0,1742,29603,47881,48886,55763,56014,63237,82978,85044,90890,91207,91451,
#Partially deleted in new
chr1	96784947	96812928	chr1:96784947-96812928	0	+	96784947	96784947	8553170	5	307,140,34,93,217,	0,19852,21471,21918,27764,
#Partially deleted in new
chr1	96785193	96813447	chr1:96785193-96813447	0	+	96785193	96785193	8553170	6	61,155,93,217,78,175,	0,19591,21672,27518,27835,28079,
#Partially deleted in new
chr1	96785193	96813447	chr1:96785193-96813447	0	+	96785193	96785193	8553170	6	61,155,93,217,78,172,	0,19591,21672,27518,27835,28082,
#Partially deleted in new
chr1	96806810	96812928	chr1:96806810-96812928	0	+	96806810	96806810	8553170	2	148,217,	0,5901,
#Partially deleted in new
chr1	97077742	97921023	chr1:97077742-97921023	3	-	97078975	97920922	789624	23	1404,141,144,180,143,120,121,84,69,165,216,185,211,170,108,88,82,197,162,88,83,111,140,	0,4587,20746,115326,157109,227516,228434,295818,304650,372316,437983,471817,496017,515475,517316,601352,613974,621608,643767,662649,750371,805521,843141,
#Partially deleted in new
chr1	97095922	97322955	chr1:97095922-97322955	3	+	97095922	97095922	789624	5	64,64,121,35,249,	0,169491,210266,212467,226784,
#Partially deleted in new
chr1	97265445	97280208	chr1:97265445-97280208	0	+	97265445	97265445	8553170	2	32,254,	0,14509,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	97265445	97296147	chr1:97265445-97296147	0	+	97265445	97265445	8553170	2	32,692,	0,30010,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	97394153	97420141	chr1:97394153-97420141	3	-	97394153	97394153	8553170	2	266,135,	0,25853,
#Deleted in new
chr1	97545700	97546958	chr1:97545700-97546958	7	+	97545700	97545700	16724991	1	1258,	0,
#Deleted in new
chr1	97585861	97586294	chr1:97585861-97586294	7	+	97585861	97585861	16724991	1	433,	0,
#Partially deleted in new
chr1	97691206	97721654	chr1:97691206-97721654	0	-	97691206	97691206	8553170	4	592,197,102,145,	0,8144,29618,30303,
#Partially deleted in new
chr1	97719757	97921049	chr1:97719757-97921049	1	-	97720887	97920922	789624	6	1169,162,88,83,111,166,	0,1752,20634,108356,163506,201126,
#Deleted in new
chr1	97774668	97775026	chr1:97774668-97775026	7	+	97774668	97774668	16724991	1	358,	0,
#Deleted in new
chr1	97796920	97797868	chr1:97796920-97797868	0	+	97796920	97796920	8553170	2	375,401,	0,547,
#Deleted in new
chr1	97796964	97798066	chr1:97796964-97798066	3	+	97796964	97796964	789624	3	108,81,599,	0,250,503,
#Partially deleted in new
chr1	97855029	97920997	chr1:97855029-97920997	0	-	97855029	97855029	8553170	3	326,111,114,	0,28234,65854,
#Deleted in new
chr1	97855574	97856825	chr1:97855574-97856825	7	+	97855574	97855574	16724991	1	1251,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	97883263	97995000	chr1:97883263-97995000	0	-	97883263	97883263	8553170	6	111,168,137,104,194,85,	0,58309,91700,91995,107986,111652,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	97933473	98046147	chr1:97933473-98046147	3	-	97933473	97933473	8553170	6	696,168,137,104,61,140,	0,8099,41490,41785,45781,112534,
#Deleted in new
chr1	97967004	97968814	chr1:97967004-97968814	3	-	97967004	97967004	8553170	1	1810,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	97986739	98045305	chr1:97986739-98045305	1	-	97986739	97986739	8553170	2	2830,756,	0,57810,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	97987999	98049863	chr1:97987999-98049863	1	-	97987999	97987999	789624	5	1570,85,389,109,486,	0,6916,58008,58519,61378,
#Deleted in new
chr1	98043351	98045458	chr1:98043351-98045458	0	-	98043351	98043351	8553170	1	2107,	0,
#Deleted in new
chr1	98044295	98046224	chr1:98044295-98046224	0	-	98044295	98044295	8553170	2	782,217,	0,1712,
#Deleted in new
chr1	98044500	98046221	chr1:98044500-98046221	0	-	98044500	98044500	8553170	2	754,214,	0,1507,
#Deleted in new
chr1	98045241	98045351	chr1:98045241-98045351	3	-	98045241	98045241	5263520	1	110,	0,
#Deleted in new
chr1	98046069	98046171	chr1:98046069-98046171	3	-	98046069	98046069	5263520	1	102,	0,
#Deleted in new
chr1	98052076	98054592	chr1:98052076-98054592	3	-	98052076	98052076	8553170	2	1677,107,	0,2409,
#Deleted in new
chr1	98076999	98077468	chr1:98076999-98077468	7	+	98076999	98076999	16724991	1	469,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	98210746	98272658	chr1:98210746-98272658	3	+	98210746	98210746	789624	3	64,101,2064,	0,38699,59848,
#Deleted in new
chr1	98660387	98661059	chr1:98660387-98661059	3	-	98660387	98660387	8553170	1	672,	0,
#Partially deleted in new
chr1	98661700	98760498	chr1:98661700-98760498	1	+	98661731	98760131	789624	8	211,183,111,199,200,87,153,445,	0,23184,29374,33817,37005,40116,76536,98353,
#Partially deleted in new
chr1	98661722	98760500	chr1:98661722-98760500	3	+	98661731	98760131	789624	9	189,183,111,165,199,200,87,153,447,	0,23162,29352,29812,33795,36983,40094,76514,98331,
#Partially deleted in new
chr1	98661809	98677331	chr1:98661809-98677331	0	+	98661809	98661809	8553170	3	102,120,31,	0,887,15491,
#Partially deleted in new
chr1	98661861	98760500	chr1:98661861-98760500	0	+	98662705	98662816	789624	9	50,120,183,111,165,199,200,87,447,	0,835,23023,29213,29673,33656,36844,39955,98192,
#Partially deleted in new
chr1	98662222	98691577	chr1:98662222-98691577	0	+	98684896	98691577	789624	4	160,183,111,43,	0,22662,28852,29312,
#Partially deleted in new
chr1	98890244	99005032	chr1:98890244-99005032	1	-	98893071	99004671	789624	6	2860,120,177,251,133,598,	0,24556,31637,62825,66364,114190,
#Partially deleted in new
chr1	98890971	99004893	chr1:98890971-99004893	3	-	98893071	99004671	789624	6	2133,135,177,251,133,459,	0,23814,30910,62098,65637,113463,
#Partially deleted in new
chr1	98990855	99004484	chr1:98990855-99004484	0	-	98990855	98990855	8553170	2	417,50,	0,13579,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	99004275	99148852	chr1:99004275-99148852	1	+	99004275	99004275	789624	3	370,95,2079,	0,139760,142498,
#Partially deleted in new
chr1	99004426	99243009	chr1:99004426-99243009	3	+	99004426	99004426	8553170	5	219,95,144,65,193,	0,139609,197502,201672,238390,
#Deleted in new
chr1	99008217	99008474	chr1:99008217-99008474	7	+	99008217	99008217	16724991	1	257,	0,
#Partially deleted in new
chr1	99263952	99309590	chr1:99263952-99309590	3	+	99264449	99307010	789624	7	719,186,130,196,58,174,3906,	0,24012,32785,35082,36956,37771,41732,
#Partially deleted in new
chr1	99264291	99309580	chr1:99264291-99309580	1	+	99264449	99307010	789624	6	380,186,130,196,58,3896,	0,23673,32446,34743,36617,41393,
#Partially deleted in new
chr1	99298863	99309590	chr1:99298863-99309590	1	+	99298970	99307010	789624	4	367,58,174,3906,	0,2045,2860,6821,
#Deleted in new
chr1	99464377	99464776	chr1:99464377-99464776	7	+	99464377	99464377	16724991	1	399,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	99472331	99493149	chr1:99472331-99493149	3	-	99472331	99472331	8553170	5	318,124,60,58,299,	0,7782,15413,18391,20519,
#Partially deleted in new
chr1	99472385	99600995	chr1:99472385-99600995	0	-	99472385	99472385	8553170	5	264,124,60,114,49,	0,7728,15359,127926,128561,
#Partially deleted in new
chr1	99472414	99534015	chr1:99472414-99534015	0	-	99472414	99472414	789624	4	235,124,60,23,	0,7699,15330,61578,
#Partially deleted in new
chr1	99645942	99694541	chr1:99645942-99694541	3	+	99646317	99694062	789624	8	420,81,125,115,34,114,1098,523,	0,16376,21699,40733,40987,41133,42832,48076,
#Partially deleted in new
chr1	99646192	99690077	chr1:99646192-99690077	1	+	99646317	99689916	789624	7	170,81,125,115,34,114,1303,	0,16126,21449,40483,40737,40883,42582,
#Partially deleted in new
chr1	99646341	99694368	chr1:99646341-99694368	1	+	99667661	99694062	789624	9	21,81,76,4,66,34,114,1098,350,	0,15977,21300,40377,40383,40588,40734,42433,47677,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	99667579	99669823	chr1:99667579-99669823	0	+	99667579	99667579	8553170	1	2244,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	99683265	99694541	chr1:99683265-99694541	0	+	99683265	99683265	8553170	5	3525,34,114,1098,523,	0,3664,3810,5509,10753,
#Partially deleted in new
chr1	99698241	99699178	chr1:99698241-99699178	7	+	99698241	99698241	16724991	2	413,159,	0,778,
#Partially deleted in new
chr1	99708631	99766630	chr1:99708631-99766630	3	-	99709027	99748768	789624	17	489,62,144,59,98,87,116,114,148,99,183,148,95,137,196,105,24,	0,566,2174,3473,3786,6954,8778,10902,19861,21018,29454,32161,33547,38662,39941,40265,57975,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	99708702	99765793	chr1:99708702-99765793	1	-	99708897	99748768	789624	17	418,62,116,59,98,87,116,114,148,99,183,148,95,137,196,105,497,	0,495,2131,3402,3715,6883,8707,10831,19790,20947,29383,32090,33476,38591,39870,40194,56594,
#Partially deleted in new
chr1	99710824	99712508	chr1:99710824-99712508	0	-	99710824	99710824	8553170	2	125,91,	0,1593,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	99710918	99715659	chr1:99710918-99715659	0	-	99710918	99710918	8553170	5	31,178,59,98,74,	0,436,1186,1499,4667,
#Partially deleted in new
chr1	99747594	99766631	chr1:99747594-99766631	0	-	99747594	99747594	8553170	3	1174,105,25,	0,1302,19012,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	99784739	99784885	chr1:99784739-99784885	3	-	99784739	99784739	8553170	1	146,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	99791661	99791753	chr1:99791661-99791753	3	+	99791661	99791661	8553170	1	92,	0,
#Deleted in new
chr1	99842609	99842761	chr1:99842609-99842761	7	+	99842609	99842609	16724991	1	152,	0,
#Partially deleted in new
chr1	99850083	99924020	chr1:99850083-99924020	3	+	99851042	99921651	789624	34	332,150,211,167,204,182,112,124,103,98,140,188,124,164,102,156,151,125,113,135,131,137,134,176,103,226,112,136,113,212,98,88,134,2487,	0,891,11419,12173,14302,20316,20674,24603,25070,25274,26374,27557,29839,30548,30992,31208,31457,34036,34255,34485,37894,41136,41522,42348,46202,50552,52599,60628,62321,63443,65305,66326,66514,71450,
#Partially deleted in new
chr1	99850488	99924020	chr1:99850488-99924020	1	+	99851042	99921651	789624	34	410,150,211,167,204,182,112,124,103,98,140,188,124,164,102,156,151,125,113,135,131,137,134,176,103,226,112,136,113,212,98,88,134,2487,	0,486,11014,11768,13897,19911,20269,24198,24665,24869,25969,27152,29434,30143,30587,30803,31052,33631,33850,34080,37489,40731,41117,41943,45797,50147,52194,60223,61916,63038,64900,65921,66109,71045,
#Partially deleted in new
chr1	99850488	99924020	chr1:99850488-99924020	1	+	99851042	99921651	789624	34	130,150,211,167,204,182,112,124,103,98,140,188,124,164,102,156,151,125,113,135,131,137,134,176,103,226,112,136,113,212,98,88,134,2487,	0,486,11014,11768,13897,19911,20269,24198,24665,24869,25969,27152,29434,30143,30587,30803,31052,33631,33850,34080,37489,40731,41117,41943,45797,50147,52194,60223,61916,63038,64900,65921,66109,71045,
#Partially deleted in new
chr1	99850488	99924020	chr1:99850488-99924020	1	+	99851042	99921651	789624	34	130,90,211,167,204,182,112,124,103,98,140,188,124,164,102,156,151,125,113,135,131,137,134,176,103,226,112,136,113,212,98,88,134,2487,	0,546,11014,11768,13897,19911,20269,24198,24665,24869,25969,27152,29434,30143,30587,30803,31052,33631,33850,34080,37489,40731,41117,41943,45797,50147,52194,60223,61916,63038,64900,65921,66109,71045,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr1	99850974	99924020	chr1:99850974-99924020	0	+	99851042	99852685	789624	34	150,143,211,167,204,182,112,124,103,98,140,188,124,164,102,156,151,125,113,135,131,137,134,176,103,226,112,136,113,212,98,88,134,2487,	0,1586,10528,11282,13411,19425,19783,23712,24179,24383,25483,26666,28948,29657,30101,30317,30566,33145,33364,33594,37003,40245,40631,41457,45311,49661,51708,59737,61430,62552,64414,65435,65623,70559,
#Partially deleted in new
chr1	99852669	99924023	chr1:99852669-99924023	1	+	99852669	99921651	789624	33	34,211,167,204,182,112,124,103,98,140,188,124,164,102,156,151,125,113,135,131,137,134,176,103,226,112,136,113,212,98,88,134,2490,	0,8833,9587,11716,17730,18088,22017,22484,22688,23788,24971,27253,27962,28406,28622,28871,31450,31669,31899,35308,38550,38936,39762,43616,47966,50013,58042,59735,60857,62719,63740,63928,68864,
#Partially deleted in new
chr1	99861209	99924020	chr1:99861209-99924020	0	+	99861209	99861209	8553170	32	504,167,204,182,112,124,103,98,140,188,124,164,102,156,151,125,113,135,131,137,134,176,103,226,112,136,113,212,98,88,134,2487,	0,1047,3176,9190,9548,13477,13944,14148,15248,16431,18713,19422,19866,20082,20331,22910,23129,23359,26768,30010,30396,31222,35076,39426,41473,49502,51195,52317,54179,55200,55388,60324,
#Partially deleted in new
chr1	99874469	99876597	chr1:99874469-99876597	0	+	99874469	99874469	8553170	4	341,103,98,140,	0,684,888,1988,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	99969350	100027722	chr1:99969350-100027722	1	+	99993554	100027211	789624	8	812,205,155,123,169,119,134,581,	0,24186,29910,37683,42014,45951,48331,57791,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	99969560	100035637	chr1:99969560-100035637	3	+	99993554	100022476	789624	8	602,205,155,123,169,119,134,13252,	0,23976,29700,37473,41804,45741,48121,52825,
#Partially deleted in new
chr1	99970004	100022611	chr1:99970004-100022611	1	+	99993554	100022442	789624	6	158,205,155,169,119,226,	0,23532,29256,41360,45297,52381,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	99970005	100024014	chr1:99970005-100024014	1	+	99993554	100022414	789624	6	157,205,155,123,169,1629,	0,23531,29255,37028,41359,52380,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	99970005	100026472	chr1:99970005-100026472	1	+	99993554	100024744	789624	7	157,205,155,169,119,134,1828,	0,23531,29255,41359,45296,47676,54639,
#Partially deleted in new
chr1	99970010	100082698	chr1:99970010-100082698	1	+	99993554	100082209	789624	16	152,205,155,123,169,119,96,63,128,115,219,114,113,98,164,696,	0,23526,29250,37023,41354,45291,79898,88655,89867,91824,97966,98462,107154,108440,110485,111992,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	99970012	100026888	chr1:99970012-100026888	1	+	99993554	100022476	789624	8	288,205,155,123,169,119,134,4503,	0,23524,29248,37021,41352,45289,47669,52373,
#Partially deleted in new
chr1	99970012	100023453	chr1:99970012-100023453	1	+	99993554	100022442	789624	7	150,205,155,123,169,119,1068,	0,23524,29248,37021,41352,45289,52373,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	99970015	100027689	chr1:99970015-100027689	0	+	99993554	100009290	789624	9	147,205,155,123,36,169,119,134,548,	0,23521,29245,37018,39272,41349,45286,47666,57126,
#Partially deleted in new
chr1	99970017	100082494	chr1:99970017-100082494	3	+	99993554	100082209	789624	17	145,205,155,123,169,119,96,63,128,115,219,114,72,113,98,164,492,	0,23519,29243,37016,41347,45284,79891,88648,89860,91817,97959,98455,99596,107147,108433,110478,111985,
#Partially deleted in new
chr1	99970017	100082591	chr1:99970017-100082591	0	+	99993554	100049931	789624	16	145,205,155,123,169,96,63,128,115,219,114,72,113,98,164,589,	0,23519,29243,37016,41347,79891,88648,89860,91817,97959,98455,99596,107147,108433,110478,111985,
#Partially deleted in new
chr1	99970019	100017881	chr1:99970019-100017881	1	+	99993554	100017819	789624	7	143,205,155,123,169,119,200,	0,23517,29241,37014,41345,45282,47662,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	99970023	100023942	chr1:99970023-100023942	0	+	99993554	100007089	789624	7	139,205,123,169,119,134,1557,	0,23513,37010,41341,45278,47658,52362,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	99970023	100026186	chr1:99970023-100026186	0	+	99993554	100007089	789624	5	139,205,123,169,3801,	0,23513,37010,41341,52362,
#Partially deleted in new
chr1	99970029	100023247	chr1:99970029-100023247	1	+	99993554	100022476	789624	7	133,205,155,169,119,134,862,	0,23507,29231,41335,45272,47652,52356,
#Partially deleted in new
chr1	99970030	100077269	chr1:99970030-100077269	0	+	99993554	100043109	789624	15	132,205,155,169,119,134,157,96,63,128,115,219,114,72,105,	0,23506,29230,41334,45271,47651,73042,79878,88635,89847,91804,97946,98442,99583,107134,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	99970030	100009576	chr1:99970030-100009576	0	+	99970030	99970030	8553170	4	132,205,155,2543,	0,23506,29230,37003,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	99970032	100027712	chr1:99970032-100027712	0	+	99993554	100007089	789624	7	130,205,123,169,119,134,571,	0,23504,37001,41332,45269,47649,57109,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	99970032	100026851	chr1:99970032-100026851	1	+	99993554	100024744	789624	9	130,99,205,155,123,169,119,134,2207,	0,4938,23504,29228,37001,41332,45269,47649,54612,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	99970035	100026636	chr1:99970035-100026636	1	+	99993554	100024839	789624	7	127,205,155,123,169,119,1992,	0,23501,29225,36998,41329,45266,54609,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	99970038	100083292	chr1:99970038-100083292	0	+	99993554	100043170	789624	16	124,205,155,123,169,157,96,63,128,115,219,114,72,113,2209,1290,	0,23498,29222,36995,41326,73034,79870,88627,89839,91796,97938,98434,99575,107126,108412,111964,
#Partially deleted in new
chr1	99970045	100015692	chr1:99970045-100015692	0	+	99993554	100007089	789624	5	117,205,123,169,391,	0,23491,36988,41319,45256,
#Partially deleted in new
chr1	99970054	100082704	chr1:99970054-100082704	0	+	99993554	99999267	789624	18	108,209,155,123,169,119,134,96,63,128,115,219,114,72,113,98,164,702,	0,23482,29206,36979,41310,45247,47627,79854,88611,89823,91780,97922,98418,99559,107110,108396,110441,111948,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	99970056	100023824	chr1:99970056-100023824	0	+	99993554	99999267	789624	8	106,209,155,123,169,119,134,1439,	0,23480,29204,36977,41308,45245,47625,52329,
#Partially deleted in new
chr1	99970080	100083321	chr1:99970080-100083321	0	+	99993554	100049921	789624	18	82,205,155,123,169,119,134,96,63,128,115,219,114,72,113,98,164,1319,	0,23456,29180,36953,41284,45221,47601,79828,88585,89797,91754,97896,98392,99533,107084,108370,110415,111922,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	99970435	100026979	chr1:99970435-100026979	1	+	99970536	100022476	789624	8	209,205,155,123,169,119,134,4594,	0,23101,28825,36598,40929,44866,47246,51950,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	99978938	99979045	chr1:99978938-99979045	3	+	99978938	99978938	8553170	1	107,	0,
#Partially deleted in new
chr1	99993042	100015341	chr1:99993042-100015341	0	+	99993042	99993042	8553170	6	56,205,155,123,169,40,	0,494,6218,13991,18322,22259,
#Partially deleted in new
chr1	99993545	100023411	chr1:99993545-100023411	0	+	99993554	100011387	789624	5	196,169,119,134,1026,	0,17819,21756,24136,28840,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	100000636	100000739	chr1:100000636-100000739	3	-	100000636	100000636	8553170	1	103,	0,
#Partially deleted in new
chr1	100038096	100083377	chr1:100038096-100083377	3	+	100038232	100082209	789624	12	220,96,63,128,115,219,114,72,113,98,164,1375,	0,11812,20569,21781,23738,29880,30376,31517,39068,40354,42399,43906,
#Partially deleted in new
chr1	100057989	100084471	chr1:100057989-100084471	3	-	100057989	100057989	8553170	2	92,292,	0,26190,
#Partially deleted in new
chr1	100058670	100062115	chr1:100058670-100062115	0	+	100058670	100058670	8553170	3	58,128,281,	0,1207,3164,
#Partially deleted in new
chr1	100083562	100132955	chr1:100083562-100132955	3	-	100085327	100132814	789624	17	1872,95,98,129,137,82,180,90,195,192,120,66,172,105,80,61,206,	0,1973,4576,19392,22204,23349,23811,24065,24247,26729,35455,36831,37815,38817,39647,42319,49187,
#Partially deleted in new
chr1	100083562	100132955	chr1:100083562-100132955	0	-	100083562	100083562	8553170	16	1872,95,98,129,137,82,180,377,192,120,66,172,105,80,61,206,	0,1973,4576,19392,22204,23349,23811,24065,26729,35455,36831,37815,38817,39647,42319,49187,
#Deleted in new
chr1	100099238	100099490	chr1:100099238-100099490	7	+	100099238	100099238	16724991	1	252,	0,
#Partially deleted in new
chr1	100133149	100140540	chr1:100133149-100140540	1	+	100133168	100140413	789624	5	166,47,67,63,133,	0,3732,3869,6499,7258,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	100133162	100150497	chr1:100133162-100150497	3	+	100133168	100148820	789624	11	153,47,67,63,70,107,168,73,75,433,1873,	0,3719,3856,6486,7019,7245,7689,9974,10906,14731,15462,
#Partially deleted in new
chr1	100133164	100144567	chr1:100133164-100144567	0	+	100133168	100140541	789624	8	151,47,67,63,70,612,73,499,	0,3717,3854,6484,7017,7243,9972,10904,
#Partially deleted in new
chr1	100133214	100140812	chr1:100133214-100140812	1	+	100133261	100140541	789624	6	101,47,67,63,70,363,	0,3667,3804,6434,6967,7235,
#Deleted in new
chr1	100142906	100144351	chr1:100142906-100144351	0	+	100142906	100142906	8553170	2	303,283,	0,1162,
#Partially deleted in new
chr1	100148448	100178273	chr1:100148448-100178273	3	-	100149041	100168516	789624	9	649,140,153,146,137,157,106,237,156,	0,3936,6602,7723,9782,10810,12017,19955,29669,
#Partially deleted in new
chr1	100148448	100178273	chr1:100148448-100178273	1	-	100149367	100168516	789624	10	649,70,140,153,146,137,157,106,237,156,	0,917,3936,6602,7723,9782,10810,12017,19955,29669,
#Partially deleted in new
chr1	100148852	100178215	chr1:100148852-100178215	1	-	100149041	100168516	789624	10	245,140,153,146,137,157,106,191,40,81,	0,3532,6198,7319,9378,10406,11613,19551,24478,29282,
#Partially deleted in new
chr1	100148852	100178215	chr1:100148852-100178215	1	-	100149367	100168516	789624	11	245,70,140,153,146,137,157,106,191,40,81,	0,513,3532,6198,7319,9378,10406,11613,19551,24478,29282,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	100186918	100249834	chr1:100186918-100249834	3	-	100196254	100249820	789624	11	9504,72,192,78,167,217,122,182,76,124,65,	0,19311,19526,23775,27898,29064,31707,43814,48517,53842,62851,
#Partially deleted in new
chr1	100196815	100197051	chr1:100196815-100197051	7	+	100196815	100196815	16724991	1	236,	0,
#Partially deleted in new
chr1	100210542	100249820	chr1:100210542-100249820	1	-	100211100	100249820	789624	8	582,167,217,122,182,76,124,51,	0,4274,5440,8083,20190,24893,30218,39227,
#Deleted in new
chr1	100213292	100213670	chr1:100213292-100213670	7	+	100213292	100213292	16724991	1	378,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	100220487	100253414	chr1:100220487-100253414	3	+	100220487	100220487	8553170	3	61,107,3620,	0,28976,29307,
#Deleted in new
chr1	100249089	100249311	chr1:100249089-100249311	7	+	100249089	100249089	16724991	1	222,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	100251527	100266179	chr1:100251527-100266179	3	-	100251527	100251527	8553170	4	2294,95,103,176,	0,13625,14287,14476,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	100266206	100292769	chr1:100266206-100292769	3	+	100266375	100291504	789624	11	214,101,144,124,59,142,125,59,95,105,1367,	0,317,1945,4350,7187,8617,9392,11051,19021,20892,25196,
#Partially deleted in new
chr1	100266215	100274843	chr1:100266215-100274843	0	+	100266215	100266215	8553170	6	205,101,222,124,59,20,	0,308,1858,4341,7178,8608,
#Partially deleted in new
chr1	100266245	100273452	chr1:100266245-100273452	0	+	100266245	100266245	8553170	6	175,101,80,144,124,59,	0,278,920,1906,4311,7148,
#Deleted in new
chr1	100266288	100266929	chr1:100266288-100266929	1	+	100266375	100266628	789624	2	132,406,	0,235,
#Deleted in new
chr1	100281240	100281308	chr1:100281240-100281308	3	+	100281240	100281240	5263520	1	68,	0,
#Deleted in new
chr1	100331803	100332617	chr1:100331803-100332617	7	-	100331803	100331803	16724991	1	814,	0,
#Deleted in new
chr1	100344476	100345242	chr1:100344476-100345242	3	+	100344476	100344476	8553170	2	116,351,	0,415,
#Partially deleted in new
chr1	100345000	100499460	chr1:100345000-100499460	0	+	100377579	100485864	789624	16	183,91,76,93,80,67,63,88,231,139,160,76,113,48,123,532,	0,8761,32545,45731,79221,94931,97933,110404,117650,122955,139291,140825,149817,151001,153084,153928,
#Partially deleted in new
chr1	100345000	100499462	chr1:100345000-100499462	0	+	100377579	100390778	789624	15	183,91,76,175,93,80,67,63,231,139,160,113,48,123,534,	0,8761,32545,38465,45731,79221,94931,97933,117650,122955,139291,149817,151001,153084,153928,
#Partially deleted in new
chr1	100345021	100499453	chr1:100345021-100499453	1	+	100377579	100499379	789624	15	162,91,76,93,80,67,63,88,231,139,160,113,48,123,525,	0,8740,32524,45710,79200,94910,97912,110383,117629,122934,139270,149796,150980,153063,153907,
#Partially deleted in new
chr1	100345037	100518253	chr1:100345037-100518253	1	+	100377579	100504891	789624	17	146,91,76,93,80,67,63,88,231,139,160,113,48,123,334,124,3,	0,8724,32508,45694,79184,94894,97896,110367,117613,122918,139254,149780,150964,153047,153891,159776,173213,
#Partially deleted in new
chr1	100345037	100498189	chr1:100345037-100498189	0	+	100377579	100484360	789624	14	146,76,93,80,67,63,88,231,139,133,160,113,48,105,	0,32508,45694,79184,94894,97896,110367,117613,122918,135912,139254,149780,150964,153047,
#Partially deleted in new
chr1	100351697	100499460	chr1:100351697-100499460	1	+	100351756	100499379	789624	15	111,91,76,93,80,67,63,88,231,139,160,113,48,123,532,	0,2064,25848,39034,72524,88234,91236,103707,110953,116258,132594,143120,144304,146387,147231,
#Partially deleted in new
chr1	100352466	100499465	chr1:100352466-100499465	3	+	100352954	100499379	789624	15	537,91,76,93,80,67,63,88,231,139,160,113,48,123,537,	0,1295,25079,38265,71755,87465,90467,102938,110184,115489,131825,142351,143535,145618,146462,
#Partially deleted in new
chr1	100352479	100520278	chr1:100352479-100520278	1	+	100352954	100518280	789624	16	524,91,76,93,80,67,63,88,231,139,160,113,48,123,334,2028,	0,1282,25066,38252,71742,87452,90454,102925,110171,115476,131812,142338,143522,145605,146449,165771,
#Partially deleted in new
chr1	100352501	100484734	chr1:100352501-100484734	1	+	100352954	100484466	789624	11	502,91,76,93,80,67,63,88,231,139,443,	0,1260,25044,38230,71720,87430,90432,102903,110149,115454,131790,
#Partially deleted in new
chr1	100352508	100391060	chr1:100352508-100391060	0	+	100352508	100352508	8553170	4	495,91,76,329,	0,1253,25037,38223,
#Partially deleted in new
chr1	100352948	100518293	chr1:100352948-100518293	1	+	100352954	100504891	789624	17	55,91,76,93,80,67,63,88,231,139,160,113,48,123,334,124,43,	0,813,24597,37783,71273,86983,89985,102456,109702,115007,131343,141869,143053,145136,145980,151865,165302,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	100363117	100455484	chr1:100363117-100455484	0	+	100363121	100455484	789624	7	108,76,93,80,67,63,80,	0,14428,27614,61104,76814,79816,92287,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	100363160	100484639	chr1:100363160-100484639	0	+	100363169	100462707	789624	9	65,76,93,80,67,63,231,139,348,	0,14385,27571,61061,76771,79773,99490,104795,121131,
#Partially deleted in new
chr1	100393032	100394026	chr1:100393032-100394026	7	-	100393032	100393032	16724991	2	625,49,	0,945,
#Partially deleted in new
chr1	100423731	100443114	chr1:100423731-100443114	0	+	100423731	100423731	8553170	3	570,67,181,	0,16200,19202,
#Partially deleted in new
chr1	100462398	100485997	chr1:100462398-100485997	3	-	100462398	100462398	8553170	2	510,82,	0,23517,
#Deleted in new
chr1	100538136	100542018	chr1:100538136-100542018	3	+	100538966	100540121	789624	2	366,3125,	0,757,
#Partially deleted in new
chr1	100586648	100587431	chr1:100586648-100587431	7	-	100586648	100586648	16724991	1	783,	0,
#Partially deleted in new
chr1	100627048	100640613	chr1:100627048-100640613	3	-	100627048	100627048	8553170	3	254,118,125,	0,1776,13440,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	100628229	100641723	chr1:100628229-100641723	3	+	100628229	100628229	8553170	3	51,172,1191,	0,571,12303,
#Partially deleted in new
chr1	100651946	100652267	chr1:100651946-100652267	7	+	100651946	100651946	16724991	1	321,	0,
#Partially deleted in new
chr1	100719741	100738613	chr1:100719741-100738613	1	+	100719860	100738283	0	9	183,90,321,267,276,321,267,267,491,	0,734,3278,4882,9365,11456,12676,14760,18381,
#Partially deleted in new
chr1	100719741	100739029	chr1:100719741-100739029	0	+	100719860	100723130	8553170	9	183,276,221,267,276,321,267,267,907,	0,734,3378,4882,9365,11456,12676,14760,18381,
#Partially deleted in new
chr1	100719754	100739045	chr1:100719754-100739045	1	+	100719860	100738283	0	8	170,276,321,267,321,267,267,923,	0,721,3265,4869,11443,12663,14747,18368,
#Partially deleted in new
chr1	100719759	100739045	chr1:100719759-100739045	3	+	100719860	100738283	0	9	165,276,321,267,276,321,267,267,923,	0,716,3260,4864,9347,11438,12658,14742,18363,
#Partially deleted in new
chr1	100719763	100739038	chr1:100719763-100739038	1	+	100719860	100738283	789624	7	161,276,321,267,267,267,916,	0,712,3256,4860,12654,14738,18359,
#Deleted in new
chr1	100735174	100739039	chr1:100735174-100739039	0	+	100735174	100735174	8553170	1	3865,	0,
#Partially deleted in new
chr1	100872371	100895179	chr1:100872371-100895179	1	-	100874419	100888757	789624	4	2059,428,112,547,	0,5104,16381,22261,
#Partially deleted in new
chr1	100872386	100894812	chr1:100872386-100894812	1	-	100873941	100888757	789624	5	2044,71,428,112,180,	0,4407,5089,16366,22246,
#Partially deleted in new
chr1	100872386	100895998	chr1:100872386-100895998	3	-	100873941	100888757	789624	5	2044,71,428,76,1366,	0,4407,5089,16366,22246,
#Partially deleted in new
chr1	100874159	100894664	chr1:100874159-100894664	0	-	100874159	100888757	789624	6	271,71,428,24,76,32,	0,2634,3316,4264,14593,20473,
#Partially deleted in new
chr1	100877518	100894811	chr1:100877518-100894811	0	-	100877518	100877869	789624	4	385,54,112,179,	0,875,11234,17114,
#Partially deleted in new
chr1	100885597	100894681	chr1:100885597-100894681	0	-	100885597	100885597	8553170	3	315,76,49,	0,3155,9035,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	100888323	100894805	chr1:100888323-100894805	0	-	100888323	100888323	8553170	2	505,173,	0,6309,
#Deleted in new
chr1	100894927	100895356	chr1:100894927-100895356	3	+	100894927	100894927	8553170	1	429,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	100896075	100981753	chr1:100896075-100981753	3	+	100896262	100974857	789624	12	267,102,114,88,127,144,51,136,91,150,93,6535,	0,494,10776,14987,16036,17587,22001,25630,65752,69693,78734,79143,
#Partially deleted in new
chr1	100896253	100974998	chr1:100896253-100974998	1	+	100896262	100974857	789624	11	89,102,114,88,127,144,51,136,91,150,189,	0,316,10598,14809,15858,17409,21823,25452,65574,69515,78556,
#Deleted in new
chr1	100941016	100941995	chr1:100941016-100941995	7	-	100941016	100941016	16724991	1	979,	0,
#Partially deleted in new
chr1	100961827	100972658	chr1:100961827-100972658	0	+	100961827	100972297	789624	3	91,150,382,	0,3941,10449,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	100989622	101025762	chr1:100989622-101025762	0	-	100989622	100989622	8553170	9	1009,104,40,121,109,125,395,158,98,	0,3014,5487,11844,24087,32018,33312,35686,36042,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	100990062	101025772	chr1:100990062-101025772	3	-	100990407	101025443	789624	8	569,104,40,121,109,125,158,90,	0,2574,5047,11404,23647,31578,35246,35620,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	100990062	101026088	chr1:100990062-101026088	0	-	100990062	100990062	8553170	8	569,104,40,109,125,395,158,284,	0,2574,5047,23647,31578,32872,35246,35742,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	100990062	101021720	chr1:100990062-101021720	0	-	100990062	100990062	8553170	4	569,40,78,80,	0,5047,11404,31578,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	100990063	100995150	chr1:100990063-100995150	1	-	100990407	100990548	789624	2	568,41,	0,5046,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	100990094	101025351	chr1:100990094-101025351	0	-	100990094	100990094	8553170	6	534,40,121,109,125,43,	0,5015,11372,23615,31546,35214,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	100990222	101025815	chr1:100990222-101025815	0	-	100990222	100990222	8553170	7	409,104,40,78,125,158,133,	0,2414,4887,11244,31418,35086,35460,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	100990223	101025763	chr1:100990223-101025763	1	-	100990407	101025443	789624	8	405,104,40,121,109,125,158,81,	0,2413,4886,11243,23486,31417,35085,35459,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	100990314	101025771	chr1:100990314-101025771	0	-	100990314	100990314	8553170	7	317,104,40,121,109,125,132,	0,2322,4795,11152,23395,31326,35325,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	100990332	101025761	chr1:100990332-101025761	0	-	100990332	100990332	8553170	7	299,104,40,121,125,158,122,	0,2304,4777,11134,31308,34976,35307,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	100990333	101025755	chr1:100990333-101025755	0	-	100990333	100990333	8553170	7	298,104,40,78,125,158,91,	0,2303,4776,11133,31307,34975,35331,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	100990357	101025767	chr1:100990357-101025767	1	-	100990407	101025443	789624	8	274,104,40,121,109,125,158,103,	0,2279,4752,11109,23352,31283,34951,35307,
#Partially deleted in new
chr1	100990392	101025815	chr1:100990392-101025815	0	-	100990392	100990392	8553170	8	239,104,40,121,59,109,125,133,	0,2244,4717,11074,21198,23317,31248,35290,
#Deleted in new
chr1	100995472	100996260	chr1:100995472-100996260	3	+	100995472	100995472	8553170	2	47,624,	0,164,
#Partially deleted in new
chr1	101013648	101025753	chr1:101013648-101025753	0	-	101013648	101013648	8553170	4	170,125,158,71,	0,7992,11660,12034,
#Deleted in new
chr1	101024969	101025787	chr1:101024969-101025787	0	-	101024969	101024969	8553170	2	497,105,	0,713,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	101025877	101080562	chr1:101025877-101080562	1	+	101025877	101025877	8553170	5	184,171,119,146,174,	0,46782,49398,51485,54511,
#Partially deleted in new
chr1	101025918	101087171	chr1:101025918-101087171	3	+	101025918	101025918	789624	5	143,322,146,114,320,	0,49476,51444,57542,60933,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	101063610	101083483	chr1:101063610-101083483	1	+	101063610	101063610	8553170	6	29,171,119,146,225,23,	0,9049,11665,13752,16778,19850,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	101072659	101087268	chr1:101072659-101087268	1	+	101072659	101072659	8553170	7	171,119,146,225,114,106,417,	0,2616,4703,7729,10801,12392,14192,
#Partially deleted in new
chr1	101072659	101083574	chr1:101072659-101083574	1	+	101072659	101072659	8553170	4	171,322,146,114,	0,2735,4703,10801,
#Partially deleted in new
chr1	101082453	101087261	chr1:101082453-101087261	0	+	101082453	101082453	8553170	2	1121,410,	0,4398,
#Deleted in new
chr1	101133152	101133339	chr1:101133152-101133339	3	+	101133152	101133152	8553170	1	187,	0,
#Partially deleted in new
chr1	101190519	101190994	chr1:101190519-101190994	7	+	101190519	101190519	16724991	1	475,	0,
#Deleted in new
chr1	101235682	101236528	chr1:101235682-101236528	3	-	101235682	101235682	8553170	2	199,204,	0,642,
#Deleted in new
chr1	101236864	101239519	chr1:101236864-101239519	0	+	101238984	101239519	8553170	2	127,698,	0,1957,
#Deleted in new
chr1	101236887	101241518	chr1:101236887-101241518	3	+	101238984	101240133	0	2	212,2697,	0,1934,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	101236898	101243713	chr1:101236898-101243713	0	+	101236898	101236898	8553170	3	201,84,1686,	0,4790,5129,
#Deleted in new
chr1	101237497	101241189	chr1:101237497-101241189	1	+	101238984	101240133	8553170	2	268,2368,	0,1324,
#Deleted in new
chr1	101238089	101241372	chr1:101238089-101241372	1	+	101238984	101240133	8553170	2	162,2551,	0,732,
#Deleted in new
chr1	101238334	101241308	chr1:101238334-101241308	1	+	101238984	101240133	8553170	2	91,2487,	0,487,
#Deleted in new
chr1	101256273	101256616	chr1:101256273-101256616	7	+	101256273	101256273	16724991	1	343,	0,
#Deleted in new
chr1	101270874	101271363	chr1:101270874-101271363	7	-	101270874	101270874	16724991	1	489,	0,
#Partially deleted in new
chr1	101323336	101350176	chr1:101323336-101350176	0	+	101323336	101323336	8553170	2	130,130,	0,26710,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	101350048	101390303	chr1:101350048-101390303	1	+	101350048	101350048	8553170	2	137,634,	0,39621,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	101639547	101729614	chr1:101639547-101729614	0	+	101639547	101639547	8553170	3	156,134,344,	0,84194,89723,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	101639547	101787382	chr1:101639547-101787382	1	+	101639547	101639547	8553170	10	156,134,297,227,134,149,108,137,112,272,	0,84194,89723,93782,97676,134553,145376,146045,147057,147563,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	101639585	101787572	chr1:101639585-101787572	3	+	101639585	101639585	8553170	7	118,99,134,134,149,108,462,	0,6668,84156,97638,134515,145338,147525,
#Partially deleted in new
chr1	101728641	101728737	chr1:101728641-101728737	3	-	101728641	101728641	8553170	1	96,	0,
#Deleted in new
chr1	101786339	101787219	chr1:101786339-101787219	7	-	101786339	101786339	16724991	1	880,	0,
#Partially deleted in new
chr1	101802573	101997030	chr1:101802573-101997030	3	-	101804237	101996816	789624	6	2342,107,220,156,147,283,	0,3502,22452,28098,34305,194174,
#Partially deleted in new
chr1	101803485	101846973	chr1:101803485-101846973	1	-	101804237	101846973	789624	6	1430,107,220,156,147,129,	0,2590,21540,27186,33393,43359,
#Partially deleted in new
chr1	101803485	101996905	chr1:101803485-101996905	0	-	101803485	101803485	789624	7	1430,107,737,220,156,147,158,	0,2590,8924,21540,27186,33393,193262,
#Partially deleted in new
chr1	101803485	101846973	chr1:101803485-101846973	0	-	101803485	101803485	789624	7	1430,107,737,220,156,147,129,	0,2590,8924,21540,27186,33393,43359,
#Partially deleted in new
chr1	101803485	101837029	chr1:101803485-101837029	1	-	101813090	101830818	789624	6	1430,107,737,220,156,151,	0,2590,8924,21540,27186,33393,
#Partially deleted in new
chr1	101825089	101910154	chr1:101825089-101910154	0	-	101825089	101825089	8553170	5	156,156,147,239,119,	0,5582,11789,12570,84946,
#Deleted in new
chr1	101859850	101859957	chr1:101859850-101859957	3	+	101859850	101859850	8553170	1	107,	0,
#Deleted in new
chr1	101882515	101882894	chr1:101882515-101882894	7	+	101882515	101882515	16724991	1	379,	0,
#Deleted in new
chr1	101893104	101894047	chr1:101893104-101894047	7	+	101893104	101893104	16724991	1	943,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	102199738	102389630	chr1:102199738-102389630	3	-	102199738	102199738	8553170	6	259,59,47,60,95,137,	0,110531,187466,187623,188796,189755,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	102763321	102853842	chr1:102763321-102853842	3	-	102763321	102763321	8553170	7	184,100,108,28,135,125,251,	0,3235,4201,4453,9636,36482,90270,
#Partially deleted in new
chr1	102876466	103108496	chr1:102876466-103108496	1	-	102878018	103108178	789624	67	1699,234,69,113,250,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,84,75,63,42,63,255,93,153,129,163,214,168,424,	0,3216,5230,6732,10340,12110,12256,12399,12988,13984,21658,22199,22474,35692,37170,37885,38237,39164,43844,45051,46869,57982,58593,62568,63860,70382,85399,85709,86186,89020,93752,98363,102241,102393,102593,102915,107671,111166,113051,119397,119522,120613,121843,125458,125961,126280,126748,127977,128141,129371,129601,129795,131996,135946,138044,139201,141353,142351,145240,146275,149054,149333,154649,198151,202191,206338,231606,
#Partially deleted in new
chr1	102876466	103108466	chr1:102876466-103108466	3	-	102878018	103108178	789624	67	1699,234,69,113,250,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,84,75,63,42,63,255,93,117,129,163,214,168,394,	0,3216,5230,6732,10340,12110,12256,12399,12988,13984,21658,22199,22474,35692,37170,37885,38237,39164,43844,45051,46869,57982,58593,62568,63860,70382,85399,85709,86186,89020,93752,98363,102241,102393,102593,102915,107671,111166,113051,119397,119522,120613,121843,125458,125961,126280,126748,127977,128141,129371,129601,129795,131996,135946,138044,139201,141353,142351,145240,146275,149054,149749,154649,198151,202191,206338,231606,
#Partially deleted in new
chr1	102876467	103108496	chr1:102876467-103108496	1	-	102878018	103108178	789624	66	1698,234,69,113,250,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,84,75,63,42,63,255,93,129,163,214,168,424,	0,3215,5229,6731,10339,12109,12255,12398,12987,13983,21657,22198,22473,35691,37169,37884,38236,39163,43843,45050,46868,57981,58592,62567,63859,70381,85398,85708,86185,89019,93751,98362,102240,102392,102592,102914,107670,111165,113050,119396,119521,120612,121842,125457,125960,126279,126747,127976,128140,129370,129600,129794,131995,135945,138043,139200,141352,142350,145239,146274,149053,154648,198150,202190,206337,231605,
#Partially deleted in new
chr1	102877484	103031213	chr1:102877484-103031213	0	-	102978711	103031213	789624	64	681,234,69,113,250,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,16,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,84,75,63,42,63,255,93,117,98,	0,2198,4212,5714,9322,11092,11238,11381,11970,12966,20640,21181,21456,34674,36152,36867,37219,38146,42826,44033,45851,56964,57575,61550,62842,69364,84381,84691,85168,88002,92734,97345,101223,101375,101575,101897,102112,106653,110148,112033,118379,118504,119595,120825,124440,124943,125262,125730,126959,127123,128353,128583,128777,130978,134928,137026,138183,140335,141333,144222,145257,148036,148731,153631,
#Partially deleted in new
chr1	102877716	102880018	chr1:102877716-102880018	0	-	102877716	102877716	8553170	2	449,336,	0,1966,
#Partially deleted in new
chr1	102877950	103108479	chr1:102877950-103108479	1	-	102878018	103108178	789624	65	215,234,69,113,250,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,84,75,63,42,63,117,129,163,214,168,407,	0,1732,3746,5248,8856,10626,10772,10915,11504,12500,20174,20715,20990,34208,35686,36401,36753,37680,42360,43567,45385,56498,57109,61084,62376,68898,83915,84225,84702,87536,92268,96879,100757,100909,101109,101431,106187,109682,111567,117913,118038,119129,120359,123974,124477,124796,125264,126493,126657,127887,128117,128311,130512,134462,136560,137717,139869,140867,143756,148265,153165,196667,200707,204854,230122,
#Partially deleted in new
chr1	102961744	102962684	chr1:102961744-102962684	0	-	102961744	102961744	8553170	3	175,90,32,	0,431,908,
#Partially deleted in new
chr1	103001013	103108485	chr1:103001013-103108485	1	-	103001153	103108178	789624	26	188,45,54,45,54,45,54,54,54,54,54,57,84,75,63,42,63,255,93,153,117,129,163,214,168,413,	0,911,1414,1733,2201,3430,3594,4824,5054,5248,7449,11399,13497,14654,16806,17804,20693,21728,24507,24786,25202,30102,73604,77644,81791,107059,
#Partially deleted in new
chr1	103001078	103108872	chr1:103001078-103108872	1	-	103001153	103108178	789624	26	123,45,54,45,54,45,54,54,54,54,54,57,84,75,63,42,63,255,93,117,129,163,214,168,200,83,	0,846,1349,1668,2136,3365,3529,4759,4989,5183,7384,11334,13432,14589,16741,17739,20628,21663,24442,25137,30037,73539,77579,81726,106994,107711,
#Partially deleted in new
chr1	103001259	103108522	chr1:103001259-103108522	1	-	103001855	103108178	789624	24	710,54,45,54,45,54,54,54,54,54,57,84,75,63,42,63,255,93,117,129,163,214,168,450,	0,1168,1487,1955,3184,3348,4578,4808,5002,7203,11153,13251,14408,16560,17558,20447,21482,24261,24956,29856,73358,77398,81545,106813,
#Partially deleted in new
chr1	103001259	103108522	chr1:103001259-103108522	1	-	103001502	103108178	789624	25	372,45,54,45,54,45,54,54,54,54,54,57,84,75,63,42,63,255,93,117,129,163,214,168,450,	0,665,1168,1487,1955,3184,3348,4578,4808,5002,7203,11153,13251,14408,16560,17558,20447,21482,24261,24956,29856,73358,77398,81545,106813,
#Partially deleted in new
chr1	103008472	103108178	chr1:103008472-103108178	0	-	103008472	103108178	789624	15	44,57,84,75,63,42,63,255,93,153,129,163,214,168,106,	0,3940,6038,7195,9347,10345,13234,14269,17048,17327,22643,66145,70185,74332,99600,
#Partially deleted in new
chr1	103030900	103082859	chr1:103030900-103082859	0	-	103031073	103082859	789624	4	344,163,214,55,	0,43717,47757,51904,
#Partially deleted in new
chr1	103100142	103100704	chr1:103100142-103100704	7	-	103100142	103100142	16724991	1	562,	0,
#Partially deleted in new
chr1	103414878	103425465	chr1:103414878-103425465	3	+	103414878	103414878	8553170	2	57,361,	0,10226,
#Partially deleted in new
chr1	103418078	103525483	chr1:103418078-103525483	3	-	103418078	103418078	8553170	4	146,87,206,88,	0,11208,14812,107317,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	103418753	103525461	chr1:103418753-103525461	0	-	103418753	103418753	8553170	5	62,87,206,49,66,	0,10533,14137,50588,106642,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	103523561	103523879	chr1:103523561-103523879	3	+	103523561	103523561	8553170	1	318,	0,
#Partially deleted in new
chr1	103525690	103553343	chr1:103525690-103553343	1	+	103526070	103551780	0	15	572,48,119,84,112,69,143,126,149,162,95,59,133,72,70,	0,2004,8048,9083,9639,10435,11651,15659,17608,19250,20557,21286,25250,26030,27583,
#Partially deleted in new
chr1	103525696	103535441	chr1:103525696-103535441	0	+	103526070	103535441	789624	6	127,196,48,119,84,112,	0,370,1998,8042,9077,9633,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	103525698	103555112	chr1:103525698-103555112	3	+	103526070	103551780	0	16	232,196,48,119,84,112,69,143,126,152,162,95,59,133,72,1839,	0,368,1996,8040,9075,9631,10427,11643,15651,17597,19242,20549,21278,25242,26022,27575,
#Partially deleted in new
chr1	103525756	103541475	chr1:103525756-103541475	0	+	103535363	103541475	789624	8	67,48,119,84,112,69,143,126,	0,1938,7982,9017,9573,10369,11585,15593,
#Partially deleted in new
chr1	103525970	103555239	chr1:103525970-103555239	1	+	103526070	103551780	0	15	292,48,119,84,112,69,143,126,152,162,95,59,133,72,206,	0,1724,7768,8803,9359,10155,11371,15379,17325,18970,20277,21006,24970,25750,29063,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	103537387	103552778	chr1:103537387-103552778	0	+	103537387	103537387	8553170	6	97,126,149,2095,133,1058,	0,3962,5911,7553,13553,14333,
#Partially deleted in new
chr1	103541360	103547035	chr1:103541360-103547035	0	+	103541360	103547035	789624	5	115,152,126,95,59,	0,1935,3616,4887,5616,
#Partially deleted in new
chr1	103546926	103551263	chr1:103546926-103551263	0	+	103546926	103546926	8553170	2	109,323,	0,4014,
#Partially deleted in new
chr1	103551723	103553714	chr1:103551723-103553714	0	+	103551723	103551780	789624	3	69,59,109,	0,1550,1882,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	103553814	103579530	chr1:103553814-103579530	0	+	103571602	103577731	789624	10	1295,214,147,198,231,134,123,100,126,220,	0,17742,18295,19248,19893,20445,21408,21626,23905,25496,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	103554699	103579529	chr1:103554699-103579529	3	+	103571602	103579500	789624	12	410,160,214,147,198,231,134,123,100,119,126,219,	0,10735,16857,17410,18363,19008,19560,20523,20741,22790,23020,24611,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	103561756	103572229	chr1:103561756-103572229	0	+	103571602	103572229	789624	4	338,160,214,120,	0,3678,9800,10353,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	103565030	103572200	chr1:103565030-103572200	0	+	103571602	103572200	789624	3	564,214,91,	0,6526,7079,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	103568333	103579530	chr1:103568333-103579530	0	+	103568333	103568333	8553170	9	3437,147,198,231,134,123,100,126,220,	0,3776,4729,5374,5926,6889,7107,9386,10977,
#Deleted in new
chr1	103569552	103570674	chr1:103569552-103570674	7	+	103569552	103569552	16724991	1	1122,	0,
#Partially deleted in new
chr1	103571099	103579530	chr1:103571099-103579530	1	+	103571602	103579500	789624	11	124,214,147,198,231,134,123,100,119,126,220,	0,457,1010,1963,2608,3160,4123,4341,6390,6620,8211,
#Deleted in new
chr1	103575314	103575781	chr1:103575314-103575781	0	+	103575314	103575314	8553170	2	31,341,	0,126,
#Partially deleted in new
chr1	103577386	103579534	chr1:103577386-103579534	0	+	103577386	103577386	8553170	2	459,224,	0,1924,
#Partially deleted in new
chr1	103616810	103625777	chr1:103616810-103625777	3	+	103617440	103625746	0	11	249,214,147,198,231,134,123,100,119,126,221,	0,584,1143,2100,2743,3740,4766,4983,7055,7285,8746,
#Partially deleted in new
chr1	103617376	103625780	chr1:103617376-103625780	1	+	103617440	103625746	0	10	232,147,198,231,134,123,100,119,126,224,	0,577,1534,2177,3174,4200,4417,6489,6719,8180,
#Partially deleted in new
chr1	103617445	103620668	chr1:103617445-103620668	0	+	103617445	103620668	789624	4	163,147,198,118,	0,508,1465,3105,
#Partially deleted in new
chr1	103621561	103625605	chr1:103621561-103625605	0	+	103621561	103621561	8553170	5	138,100,119,126,49,	0,232,2304,2534,3995,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	103655289	103658604	chr1:103655289-103658604	0	+	103656330	103658604	789624	5	639,214,147,198,165,	0,995,1554,2504,3150,
#Deleted in new
chr1	103655754	103664554	chr1:103655754-103664554	3	+	103656330	103664520	0	11	174,214,147,198,231,134,123,100,119,126,224,	0,530,1089,2039,2685,3655,4605,4822,6902,7131,8576,
#Deleted in new
chr1	103656017	103656990	chr1:103656017-103656990	0	+	103656330	103656990	789624	3	42,214,147,	0,267,826,
#Deleted in new
chr1	103656806	103659543	chr1:103656806-103659543	0	+	103656806	103656806	8553170	4	184,198,231,134,	0,987,1633,2603,
#Deleted in new
chr1	103662743	103664549	chr1:103662743-103664549	0	+	103662743	103662743	8553170	4	32,126,171,193,	0,142,691,1613,
#Partially deleted in new
chr1	103668070	103668268	chr1:103668070-103668268	7	-	103668070	103668070	16724991	1	198,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	103687414	103696454	chr1:103687414-103696454	3	-	103687448	103695639	0	11	224,126,119,100,123,134,231,198,147,214,171,	0,1543,1779,3879,4073,5012,5885,6564,7565,8057,8869,
#Partially deleted in new
chr1	103687417	103696290	chr1:103687417-103696290	1	-	103687448	103695639	0	11	221,126,119,100,123,134,231,198,147,214,249,	0,1540,1776,3876,4070,5009,5882,6561,7562,8054,8624,
#Partially deleted in new
chr1	103692426	103695163	chr1:103692426-103695163	0	-	103692426	103692426	8553170	4	134,231,198,184,	0,873,1552,2553,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	103693365	103696680	chr1:103693365-103696680	0	-	103693365	103695639	789624	5	165,198,147,214,639,	0,613,1614,2106,2676,
#Partially deleted in new
chr1	103694979	103695952	chr1:103694979-103695952	0	-	103694979	103695639	789624	3	147,214,42,	0,492,931,
#Partially deleted in new
chr1	103713722	103719871	chr1:103713722-103719871	7	+	103713722	103713722	16724991	7	231,134,123,100,119,126,190,	0,1032,1979,2196,4268,4498,5959,
#Partially deleted in new
chr1	103750405	103758690	chr1:103750405-103758690	3	+	103750469	103758658	0	10	232,147,198,231,134,123,100,119,126,222,	0,577,1527,2173,3143,4093,4309,6389,6618,8063,
#Partially deleted in new
chr1	103926566	103927806	chr1:103926566-103927806	7	+	103926566	103926566	16724991	1	1240,	0,
#Partially deleted in new
chr1	104072982	104126914	chr1:104072982-104126914	5	+	104072982	104072982	16724991	2	922,1353,	0,52579,
#Deleted in new
chr1	104073009	104073537	chr1:104073009-104073537	5	+	104073009	104073009	16724991	1	528,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	104073022	104077087	chr1:104073022-104077087	4	+	104073022	104073022	16724991	2	882,343,	0,3722,
#Partially deleted in new
chr1	104073169	104226678	chr1:104073169-104226678	7	+	104073169	104073169	16724991	4	735,116,50,165,	0,135125,138391,153344,
#Partially deleted in new
chr1	104073850	104125845	chr1:104073850-104125845	4	+	104073850	104073850	16724991	3	54,197,284,	0,18157,51711,
#Deleted in new
chr1	104153305	104153830	chr1:104153305-104153830	7	-	104153305	104153305	16724991	1	525,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	104998405	105032365	chr1:104998405-105032365	3	-	104998405	104998405	8553170	5	43,193,43,50,290,	0,2497,24702,26648,33670,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	105433993	105434821	chr1:105433993-105434821	7	+	105433993	105433993	16724991	1	828,	0,
#Partially deleted in new
chr1	105587574	105606007	chr1:105587574-105606007	0	-	105587574	105587574	8553170	4	274,106,103,73,	0,2105,16588,18360,
#Partially deleted in new
chr1	105587579	105606007	chr1:105587579-105606007	0	-	105587579	105587579	8553170	5	269,106,129,103,73,	0,2100,13051,16583,18355,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	105587693	105618928	chr1:105587693-105618928	3	-	105587693	105587693	8553170	6	155,106,282,103,155,70,	0,1986,15583,16469,18241,31165,
#Partially deleted in new
chr1	105589679	105606007	chr1:105589679-105606007	0	-	105589679	105589679	8553170	3	106,98,73,	0,14483,16255,
#Partially deleted in new
chr1	105589692	105606007	chr1:105589692-105606007	0	-	105589692	105589692	8553170	4	93,116,103,73,	0,11577,14470,16242,
#Partially deleted in new
chr1	105589693	105618918	chr1:105589693-105618918	1	-	105589693	105589693	789624	4	92,103,155,60,	0,14469,16241,29165,
#Partially deleted in new
chr1	105589693	105606007	chr1:105589693-105606007	0	-	105589693	105589693	8553170	2	92,73,	0,16241,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	105589695	105618935	chr1:105589695-105618935	1	-	105589695	105589695	8553170	6	90,282,103,155,45,77,	0,13581,14467,16239,23204,29163,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	105589696	105606007	chr1:105589696-105606007	0	-	105589696	105589696	8553170	5	89,116,282,103,73,	0,11573,13580,14466,16238,
#Partially deleted in new
chr1	105590017	105606007	chr1:105590017-105606007	0	-	105590017	105590017	8553170	3	215,103,73,	0,14145,15917,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	105590038	105606003	chr1:105590038-105606003	0	-	105590038	105590038	8553170	4	194,286,103,69,	0,13238,14124,15896,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	105600491	105606007	chr1:105600491-105606007	0	-	105600491	105600491	8553170	3	268,103,73,	0,3671,5443,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	105601149	105606007	chr1:105601149-105606007	0	-	105601149	105601149	8553170	4	236,282,103,73,	0,2127,3013,4785,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	105602151	105618958	chr1:105602151-105618958	1	-	105602151	105602151	789624	4	1407,103,155,184,	0,2011,3783,16623,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	105602937	105618875	chr1:105602937-105618875	1	-	105602937	105602937	8553170	4	621,103,155,17,	0,1225,2997,15921,
#Deleted in new
chr1	105698038	105698218	chr1:105698038-105698218	7	+	105698038	105698038	16724991	1	180,	0,
#Deleted in new
chr1	105890692	105891430	chr1:105890692-105891430	7	-	105890692	105890692	16724991	2	280,313,	0,425,
#Deleted in new
chr1	105891738	105893517	chr1:105891738-105893517	7	+	105891738	105891738	16724991	1	1779,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	105927623	106023212	chr1:105927623-106023212	0	-	105927623	105927623	8553170	4	91,58,179,131,	0,60826,64542,95458,
#Partially deleted in new
chr1	105927623	105952894	chr1:105927623-105952894	0	-	105927623	105927623	8553170	3	91,72,391,	0,24584,24880,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	105927623	105956664	chr1:105927623-105956664	0	-	105927623	105927623	8553170	6	91,72,97,341,202,163,	0,24584,24880,25748,26886,28878,
#Partially deleted in new
chr1	105927624	105953489	chr1:105927624-105953489	0	-	105927624	105927624	8553170	4	90,72,97,118,	0,24583,24879,25747,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	105927624	106028062	chr1:105927624-106028062	3	-	105927624	105927624	8553170	9	90,72,97,341,58,191,87,136,257,	0,24583,24879,25747,60825,64529,95457,99578,100181,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	105935331	106028277	chr1:105935331-106028277	1	-	105935331	105935331	8553170	7	54,72,1209,344,131,80,472,	0,16876,17172,21170,87750,91871,92474,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	105956693	106048753	chr1:105956693-106048753	1	+	105956693	105956693	8553170	8	154,139,114,255,85,111,149,535,	0,8990,22213,81656,84873,89860,90932,91525,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	105956714	106084304	chr1:105956714-106084304	3	+	105956714	105956714	8553170	8	133,255,85,80,111,149,128,1340,	0,81635,84852,85117,89839,90911,91504,126250,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	105956715	105967623	chr1:105956715-105967623	0	+	105956715	105956715	8553170	3	132,54,1944,	0,4754,8964,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	105956715	105966202	chr1:105956715-105966202	1	+	105956715	105956715	8553170	5	132,199,117,54,523,	0,1248,2039,4754,8964,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	105956715	106042738	chr1:105956715-106042738	1	+	105956715	105956715	8553170	6	132,143,124,255,85,907,	0,8964,65302,81634,84851,85116,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	105956739	106063067	chr1:105956739-106063067	1	+	105956739	105956739	8553170	8	108,255,85,209,111,149,128,858,	0,81610,84827,85092,89814,90886,91479,105470,
#Partially deleted in new
chr1	106038366	106064920	chr1:106038366-106064920	0	+	106038366	106038366	8553170	5	238,85,111,128,412,	0,3200,8187,9852,26142,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	106038546	106124564	chr1:106038546-106124564	1	+	106038546	106038546	8553170	6	58,85,80,111,128,789,	0,3020,3285,8007,9672,85229,
#Deleted in new
chr1	106080800	106081379	chr1:106080800-106081379	7	-	106080800	106080800	16724991	1	579,	0,
#Partially deleted in new
chr1	106081160	106084496	chr1:106081160-106084496	0	+	106081160	106081160	8553170	2	264,67,	0,3269,
#Deleted in new
chr1	106544341	106544744	chr1:106544341-106544744	7	-	106544341	106544341	16724991	1	403,	0,
#Deleted in new
chr1	106780222	106780435	chr1:106780222-106780435	7	+	106780222	106780222	16724991	1	213,	0,
#Deleted in new
chr1	106802754	106803427	chr1:106802754-106803427	7	-	106802754	106802754	16724991	1	673,	0,
#Deleted in new
chr1	106804473	106806032	chr1:106804473-106806032	7	-	106804473	106804473	16724991	1	1559,	0,
#Partially deleted in new
chr1	106818238	106838167	chr1:106818238-106838167	3	+	106818238	106818238	789624	3	121,539,48,	0,1965,19881,
#Deleted in new
chr1	107056678	107059294	chr1:107056678-107059294	3	+	107056715	107057843	0	1	2616,	0,
#Partially deleted in new
chr1	107056901	107067636	chr1:107056901-107067636	0	+	107056901	107057843	8553170	3	1006,427,1282,	0,3296,9453,
#Partially deleted in new
chr1	107057436	107060634	chr1:107057436-107060634	0	+	107057436	107057436	8553170	2	471,437,	0,2761,
#Partially deleted in new
chr1	107140006	107481828	chr1:107140006-107481828	1	+	107148593	107480840	0	8	193,771,641,173,27,66,60,1218,	0,8062,184275,255147,267675,278573,281077,340604,
#Partially deleted in new
chr1	107140006	107481849	chr1:107140006-107481849	3	+	107148593	107480840	0	8	193,771,641,173,27,168,135,1239,	0,8062,184275,255147,267675,290743,296658,340604,
#Partially deleted in new
chr1	107140006	107481853	chr1:107140006-107481853	1	+	107148593	107480840	0	6	193,771,641,173,27,1243,	0,8062,184275,255147,267675,340604,
#Partially deleted in new
chr1	107140819	107482408	chr1:107140819-107482408	1	+	107148593	107480840	0	8	321,771,641,173,27,168,135,1798,	0,7249,183462,254334,266862,289930,295845,339791,
#Partially deleted in new
chr1	107140926	107410585	chr1:107140926-107410585	0	+	107140926	107140926	8553170	5	214,771,641,173,2904,	0,7142,183355,254227,266755,
#Partially deleted in new
chr1	107141038	107483458	chr1:107141038-107483458	1	+	107148593	107480840	0	7	102,771,641,173,27,66,2848,	0,7030,183243,254115,266643,277541,339572,
#Deleted in new
chr1	107141368	107148807	chr1:107141368-107148807	0	+	107141368	107141368	8553170	2	91,739,	0,6700,
#Deleted in new
chr1	107143075	107148300	chr1:107143075-107148300	0	+	107143075	107143075	8553170	2	342,232,	0,4993,
#Partially deleted in new
chr1	107148593	107480840	chr1:107148593-107480840	1	+	107148593	107480840	0	6	246,641,173,27,168,230,	0,175688,246560,259088,282156,332017,
#Partially deleted in new
chr1	107148593	107480840	chr1:107148593-107480840	1	+	107148593	107480840	0	7	246,641,173,27,66,60,230,	0,175688,246560,259088,269986,272490,332017,
#Partially deleted in new
chr1	107260802	107334023	chr1:107260802-107334023	0	+	107260802	107260802	8553170	5	214,641,78,58,75,	0,63479,68124,70015,73146,
#Deleted in new
chr1	107505202	107505448	chr1:107505202-107505448	7	+	107505202	107505202	16724991	1	246,	0,
#Partially deleted in new
chr1	107571159	107965144	chr1:107571159-107965144	3	-	107573330	107964869	0	27	2213,152,130,88,117,35,66,137,46,26,101,102,110,133,86,87,69,96,100,104,69,93,109,66,59,117,479,	0,2887,25052,31237,31887,38771,46407,71459,112328,117221,133390,133800,177808,178302,179957,184267,186101,189624,193916,195287,197281,199476,201575,206071,208274,303741,393506,
#Partially deleted in new
chr1	107571588	107965009	chr1:107571588-107965009	1	-	107573330	107964869	0	28	1784,152,84,130,88,117,35,66,137,46,26,101,102,110,133,86,87,69,96,100,104,69,93,109,66,59,117,344,	0,2458,4803,24623,30808,31458,38342,45978,71030,111899,116792,132961,133371,177379,177873,179528,183838,185672,189195,193487,194858,196852,199047,201146,205642,207845,303312,393077,
#Partially deleted in new
chr1	107572847	107688504	chr1:107572847-107688504	0	-	107642647	107688431	789624	9	525,152,130,88,117,35,66,137,124,	0,1199,23364,29549,30199,37083,44719,69771,115533,
#Partially deleted in new
chr1	107572949	107678009	chr1:107572949-107678009	0	-	107572949	107572949	8553170	10	423,152,84,130,88,117,35,66,137,191,	0,1097,3442,23262,29447,30097,36981,44617,69669,104869,
#Partially deleted in new
chr1	107572974	107688504	chr1:107572974-107688504	1	-	107573330	107688431	0	10	398,152,130,88,117,35,66,137,46,124,	0,1072,23237,29422,30072,36956,44592,69644,110513,115406,
#Partially deleted in new
chr1	107573168	107785624	chr1:107573168-107785624	0	-	107573168	107573168	8553170	26	204,152,130,88,117,35,66,137,46,26,101,102,110,133,86,87,69,96,100,104,69,93,109,66,59,167,	0,878,23043,29228,29878,36762,44398,69450,110319,115212,131381,131791,175799,176293,177948,182258,184092,187615,191907,193278,195272,197467,199566,204062,206265,212289,
#Partially deleted in new
chr1	107596294	107673649	chr1:107596294-107673649	0	-	107596294	107596294	8553170	7	47,88,117,35,66,137,59,	0,6102,6752,13636,21272,46324,77296,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	107603096	107688504	chr1:107603096-107688504	0	-	107642647	107688431	789624	6	67,116,35,66,137,124,	0,6327,6834,14470,39522,85284,
#Partially deleted in new
chr1	107609813	107688528	chr1:107609813-107688528	0	-	107609813	107609813	8553170	5	152,66,137,46,148,	0,7753,32805,73674,78567,
#Partially deleted in new
chr1	107617583	107749508	chr1:107617583-107749508	0	-	107617583	107749508	789624	6	49,137,101,102,110,47,	0,25035,86966,87376,131384,131878,
#Partially deleted in new
chr1	107668838	107963596	chr1:107668838-107963596	0	-	107668838	107668838	8553170	21	634,46,26,101,102,110,133,86,87,69,96,100,104,69,93,109,66,101,59,117,179,	0,14649,19542,35711,36121,80129,80623,82278,86588,88422,91945,96237,97608,99602,101797,103896,108392,108831,110595,206062,294579,
#Partially deleted in new
chr1	107668962	107964853	chr1:107668962-107964853	0	-	107669383	107964853	789624	20	510,46,26,101,102,110,133,86,87,69,96,100,104,69,93,109,66,59,117,188,	0,14525,19418,35587,35997,80005,80499,82154,86464,88298,91821,96113,97484,99478,101673,103772,108268,110471,205938,295703,
#Partially deleted in new
chr1	107766514	107820896	chr1:107766514-107820896	0	-	107766514	107766514	8553170	7	36,69,93,109,66,59,111,	0,1926,4121,6220,10716,12919,54271,
#Partially deleted in new
chr1	107770658	107963500	chr1:107770658-107963500	0	-	107770658	107770658	8553170	7	70,109,66,59,71,117,83,	0,2076,6572,8775,92025,104242,192759,
#Deleted in new
chr1	107897222	107897304	chr1:107897222-107897304	3	+	107897222	107897222	5263520	1	82,	0,
#Partially deleted in new
chr1	107964442	107994607	chr1:107964442-107994607	3	+	107964442	107964442	789624	3	62,131,426,	0,29062,29739,
#Partially deleted in new
chr1	108040262	108074519	chr1:108040262-108074519	3	+	108040262	108040262	8553170	5	117,187,154,149,127,	0,1475,31221,32286,34130,
#Partially deleted in new
chr1	108050378	108076020	chr1:108050378-108076020	1	+	108050378	108050378	8553170	5	357,151,154,149,1628,	0,1932,21105,22170,24014,
#Partially deleted in new
chr1	108050380	108072022	chr1:108050380-108072022	1	+	108050380	108050380	8553170	2	355,539,	0,21103,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	108059043	108074518	chr1:108059043-108074518	0	+	108059043	108059043	8553170	4	405,154,149,126,	0,12440,13505,15349,
#Partially deleted in new
chr1	108072370	108074493	chr1:108072370-108074493	0	+	108072370	108072370	8553170	2	327,101,	0,2022,
#Partially deleted in new
chr1	108134035	108200358	chr1:108134035-108200358	3	-	108136652	108200138	0	10	2802,151,168,108,153,159,112,88,127,403,	0,5022,9507,14243,20947,23426,27146,47905,51792,65920,
#Partially deleted in new
chr1	108134819	108200279	chr1:108134819-108200279	0	-	108161270	108200138	789624	9	2018,151,168,108,153,159,112,127,324,	0,4238,8723,13459,20163,22642,26362,51008,65136,
#Partially deleted in new
chr1	108134822	108192818	chr1:108134822-108192818	1	-	108136652	108192621	0	10	2015,151,168,108,153,159,112,88,127,323,	0,4235,8720,13456,20160,22639,26359,47118,51005,57673,
#Partially deleted in new
chr1	108134868	108200319	chr1:108134868-108200319	0	-	108156741	108200138	8553170	11	1969,151,168,108,102,185,159,112,88,127,364,	0,4189,8674,13410,20114,21832,22593,26313,47072,50959,65087,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	108198492	108200849	chr1:108198492-108200849	1	-	108199928	108200138	789624	1	2357,	0,
#Deleted in new
chr1	108199925	108201491	chr1:108199925-108201491	3	+	108199925	108199925	8553170	1	1566,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	108200412	108202743	chr1:108200412-108202743	3	+	108200412	108200412	8553170	1	2331,	0,
#Partially deleted in new
chr1	108223340	108244067	chr1:108223340-108244067	3	-	108223704	108243761	789624	15	406,215,237,173,52,170,52,140,52,212,79,215,100,213,169,	0,3338,5579,8915,9819,10901,11895,12929,13946,15407,16487,17609,18733,20243,20558,
#Partially deleted in new
chr1	108223704	108244081	chr1:108223704-108244081	1	-	108223704	108243761	789624	16	42,215,237,173,52,170,52,140,87,52,212,79,215,100,213,183,	0,2974,5215,8551,9455,10537,11531,12565,13306,13582,15043,16123,17245,18369,19879,20194,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	108261195	108273689	chr1:108261195-108273689	3	-	108261195	108261195	8553170	2	1595,886,	0,11608,
#Partially deleted in new
chr1	108272942	108337853	chr1:108272942-108337853	7	+	108272942	108272942	16724991	6	379,112,108,168,151,651,	0,11297,58228,60714,63034,64260,
#Partially deleted in new
chr1	108273138	108337387	chr1:108273138-108337387	5	+	108273138	108273138	16724991	8	183,112,159,153,108,168,151,186,	0,11101,37346,40943,58032,60518,62838,64063,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	108375837	108410814	chr1:108375837-108410814	7	+	108375837	108375837	16724991	10	144,213,100,215,79,212,52,140,140,311,	0,246,1869,2882,4140,5087,6708,7637,9983,34666,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	108376118	108385897	chr1:108376118-108385897	5	+	108376118	108376118	16724991	8	177,96,213,75,210,48,138,75,	0,1590,2602,3861,4807,6429,7357,9704,
#Partially deleted in new
chr1	108383735	108421295	chr1:108383735-108421295	7	-	108383735	108383735	16724991	3	159,112,239,	0,26292,37321,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	108420688	108433184	chr1:108420688-108433184	3	+	108420688	108420688	8553170	2	886,1595,	0,10901,
#Partially deleted in new
chr1	108450281	108470638	chr1:108450281-108470638	1	+	108450601	108470638	789624	16	183,213,100,215,79,212,52,87,140,52,170,52,173,237,215,42,	0,285,1908,2899,4157,5104,6725,6966,7654,8776,9651,10851,11634,14906,17169,20315,
#Partially deleted in new
chr1	108450286	108471002	chr1:108450286-108471002	3	+	108450601	108470638	789624	15	178,213,100,215,79,212,52,140,52,170,52,173,237,215,406,	0,280,1903,2894,4152,5099,6720,7649,8771,9646,10846,11629,14901,17164,20310,
#Partially deleted in new
chr1	108450320	108465395	chr1:108450320-108465395	0	+	108450601	108465395	789624	14	144,213,100,215,79,212,52,87,140,52,170,52,173,208,	0,246,1869,2860,4118,5065,6686,6927,7615,8737,9612,10812,11595,14867,
#Partially deleted in new
chr1	108495474	108501144	chr1:108495474-108501144	7	-	108495474	108495474	16724991	2	159,126,	0,5544,
#Deleted in new
chr1	108502357	108503455	chr1:108502357-108503455	7	+	108502357	108502357	16724991	1	1098,	0,
#Deleted in new
chr1	108508573	108509243	chr1:108508573-108509243	7	+	108508573	108508573	16724991	1	670,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	108560088	108639327	chr1:108560088-108639327	3	+	108560428	108635150	789624	11	477,121,30,117,47,104,96,190,128,70,4220,	0,40477,46134,52089,56293,64556,68078,68306,68588,69499,75019,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	108624664	108639322	chr1:108624664-108639322	0	+	108624664	108624664	8553170	4	3920,128,70,4215,	0,4012,4923,10443,
#Partially deleted in new
chr1	108648289	108661122	chr1:108648289-108661122	1	-	108648565	108659884	0	8	702,178,180,135,113,129,99,160,	0,1921,2740,6426,7296,9161,11574,12673,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	108648294	108661055	chr1:108648294-108661055	1	-	108648565	108659884	789624	9	697,93,178,180,135,113,129,99,93,	0,1046,1916,2735,6421,7291,9156,11569,12668,
#Partially deleted in new
chr1	108648294	108661526	chr1:108648294-108661526	3	-	108648565	108659884	0	8	697,178,180,135,113,129,99,343,	0,1916,2735,6421,7291,9156,11569,12889,
#Partially deleted in new
chr1	108648799	108661180	chr1:108648799-108661180	0	-	108648799	108659884	789624	8	192,178,180,135,113,129,99,218,	0,1411,2230,5916,6786,8651,11064,12163,
#Partially deleted in new
chr1	108648893	108661064	chr1:108648893-108661064	0	-	108648893	108648893	8553170	6	98,178,180,135,129,102,	0,1317,2136,5822,8557,12069,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	108650223	108651445	chr1:108650223-108651445	0	-	108650223	108650223	8553170	2	165,416,	0,806,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	108661532	108666246	chr1:108661532-108666246	3	+	108661532	108661532	8553170	3	311,138,497,	0,1218,4217,
#Partially deleted in new
chr1	108692322	108701803	chr1:108692322-108701803	3	+	108692591	108700020	789624	6	545,69,152,61,224,2642,	0,3379,3720,3954,6281,6839,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	108692323	108697504	chr1:108692323-108697504	1	+	108692591	108696754	789624	5	544,69,152,61,765,	0,3378,3719,3953,4416,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	108692326	108697504	chr1:108692326-108697504	0	+	108692326	108692326	8553170	5	541,53,69,152,1228,	0,1263,3375,3716,3950,
#Partially deleted in new
chr1	108692340	108701803	chr1:108692340-108701803	1	+	108695758	108700020	789624	7	527,53,69,152,61,224,2642,	0,1249,3361,3702,3936,6263,6821,
#Deleted in new
chr1	108697699	108699385	chr1:108697699-108699385	0	+	108697699	108697699	8553170	2	1128,224,	0,1462,
#Partially deleted in new
chr1	108712656	108742740	chr1:108712656-108742740	3	+	108712933	108741804	789624	13	340,19,255,261,258,255,258,255,255,261,30,69,816,	0,854,5120,6132,9678,13093,15151,15975,18017,20615,24838,29116,29268,
#Partially deleted in new
chr1	108722410	108742056	chr1:108722410-108742056	0	+	108722410	108741804	789624	8	182,255,258,255,255,261,69,132,	0,3339,5397,6221,8263,10861,19362,19514,
#Partially deleted in new
chr1	108734255	108734725	chr1:108734255-108734725	3	-	108734255	108734255	8553170	2	205,181,	0,289,
#Partially deleted in new
chr1	108746673	108757005	chr1:108746673-108757005	0	+	108746673	108746673	8553170	4	113,50,82,316,	0,5583,6389,10016,
#Partially deleted in new
chr1	108746681	108753201	chr1:108746681-108753201	0	+	108746681	108746681	8553170	3	105,50,139,	0,5575,6381,
#Partially deleted in new
chr1	108746687	108809526	chr1:108746687-108809526	3	+	108746737	108808877	789624	19	99,50,82,77,79,101,155,91,125,96,58,66,81,139,107,93,86,149,744,	0,5569,6375,10002,11822,13297,25977,29645,32598,35734,35961,46894,48139,49546,49932,51457,53532,60713,62095,
#Partially deleted in new
chr1	108759056	108776423	chr1:108759056-108776423	0	+	108759056	108759056	8553170	4	167,101,155,91,	0,928,13608,17276,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	108760052	108781542	chr1:108760052-108781542	0	+	108760052	108760052	8553170	4	33,155,91,2257,	0,12612,16280,19233,
#Deleted in new
chr1	108766840	108767584	chr1:108766840-108767584	7	-	108766840	108766840	16724991	1	744,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	108781860	108793631	chr1:108781860-108793631	0	+	108781860	108781860	8553170	3	657,58,50,	0,788,11721,
#Partially deleted in new
chr1	108796234	108807481	chr1:108796234-108807481	0	+	108796234	108796234	8553170	4	492,93,86,81,	0,1910,3985,11166,
#Partially deleted in new
chr1	108815897	108857094	chr1:108815897-108857094	3	-	108816170	108852664	789624	16	405,130,82,108,123,98,92,82,128,157,134,63,149,40,1096,166,	0,1150,4647,7472,7668,11307,14661,18549,19031,21652,27236,32854,33014,33639,35774,41031,
#Deleted in new
chr1	108815897	108817454	chr1:108815897-108817454	0	-	108815897	108815897	8553170	2	405,407,	0,1150,
#Partially deleted in new
chr1	108815900	108858228	chr1:108815900-108858228	0	-	108817175	108852664	789624	14	402,130,108,123,98,92,157,134,63,149,40,1096,132,171,	0,1147,7469,7665,11304,14658,21649,27233,32851,33011,33636,35771,41028,42157,
#Partially deleted in new
chr1	108816142	108820578	chr1:108816142-108820578	0	-	108816142	108816142	8553170	3	160,304,34,	0,731,4402,
#Partially deleted in new
chr1	108823056	108852717	chr1:108823056-108852717	1	-	108823152	108852664	789624	13	188,108,123,98,92,82,38,157,134,63,149,40,1046,	0,313,509,4148,7502,11390,11872,14493,20077,25695,25855,26480,28615,
#Partially deleted in new
chr1	108823056	108857084	chr1:108823056-108857084	1	-	108823152	108852664	789624	14	215,108,123,98,92,82,128,157,134,63,149,40,1096,156,	0,313,509,4148,7502,11390,11872,14493,20077,25695,25855,26480,28615,33872,
#Partially deleted in new
chr1	108823059	108857076	chr1:108823059-108857076	0	-	108830604	108852664	789624	12	418,123,98,92,128,157,134,63,149,40,1096,148,	0,506,4145,7499,11869,14490,20074,25692,25852,26477,28612,33869,
#Partially deleted in new
chr1	108823275	108830734	chr1:108823275-108830734	0	-	108823275	108823275	8553170	4	202,123,98,176,	0,290,3929,7283,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	108836723	108857084	chr1:108836723-108857084	0	-	108843281	108852664	789624	7	983,151,63,149,40,1096,156,	0,6410,12028,12188,12813,14948,20205,
#Partially deleted in new
chr1	108837659	108963484	chr1:108837659-108963484	3	-	108837659	108963474	789624	6	47,134,63,149,40,124,	0,5474,11092,11252,11877,125701,
#Deleted in new
chr1	108857216	108858524	chr1:108857216-108858524	3	+	108857216	108857216	789624	3	285,110,140,	0,941,1168,
#Deleted in new
chr1	108857243	108858340	chr1:108857243-108858340	0	+	108857243	108857243	789624	2	258,183,	0,914,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	108875349	108934545	chr1:108875349-108934545	3	+	108885522	108929940	0	16	33,492,304,222,136,143,124,116,156,109,130,71,177,160,215,4845,	0,1387,9925,21514,22142,22609,23292,23529,26440,27776,28775,38988,43263,47067,48650,54351,
#Partially deleted in new
chr1	108876980	108898724	chr1:108876980-108898724	0	+	108885522	108898724	789624	6	248,72,222,136,143,83,	0,8526,19883,20511,20978,21661,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	108876980	108934335	chr1:108876980-108934335	1	+	108885522	108929940	0	16	248,304,222,136,143,124,116,156,109,130,71,177,160,215,275,3023,	0,8294,19883,20511,20978,21661,21898,24809,26145,27144,37357,41632,45436,47019,52720,54332,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	108876980	108897058	chr1:108876980-108897058	0	+	108885522	108897058	789624	4	248,46,72,195,	0,5599,8526,19883,
#Partially deleted in new
chr1	108876984	108930422	chr1:108876984-108930422	1	+	108885522	108929940	0	15	244,304,222,136,143,124,116,156,109,130,71,177,160,215,722,	0,8290,19879,20507,20974,21657,21894,24805,26141,27140,37353,41628,45432,47015,52716,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	108877002	108897086	chr1:108877002-108897086	0	+	108885522	108897086	789624	4	226,46,304,223,	0,5577,8272,19861,
#Partially deleted in new
chr1	108877255	108897032	chr1:108877255-108897032	0	+	108885522	108897032	789624	3	519,304,169,	0,8019,19608,
#Partially deleted in new
chr1	108877407	108896963	chr1:108877407-108896963	0	+	108885522	108896963	789624	3	167,304,100,	0,7867,19456,
#Partially deleted in new
chr1	108897535	108904225	chr1:108897535-108904225	0	+	108897535	108904225	789624	6	92,143,124,116,109,101,	0,423,1106,1343,5590,6589,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	108901903	108926890	chr1:108901903-108926890	0	+	108901903	108926304	789624	8	42,109,130,71,177,160,215,616,	0,1222,2221,12434,16709,20513,22096,24371,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	108903169	108909981	chr1:108903169-108909981	0	+	108903169	108903169	8553170	3	65,130,368,	0,955,6444,
#Partially deleted in new
chr1	108914376	108924361	chr1:108914376-108924361	0	+	108914376	108924283	789624	4	32,177,160,362,	0,4236,8040,9623,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	108929507	108963457	chr1:108929507-108963457	1	-	108934669	108950437	789624	12	2994,318,342,147,98,94,141,222,108,102,140,97,	0,5117,7569,10128,10537,11897,13967,14328,18103,20312,20801,33853,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	108929507	108950448	chr1:108929507-108950448	1	-	108934669	108950437	789624	7	2994,318,342,147,108,102,140,	0,5117,7569,10128,18103,20312,20801,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	108929507	108950448	chr1:108929507-108950448	1	-	108934669	108950437	789624	9	2994,318,342,147,98,94,108,102,140,	0,5117,7569,10128,10537,11897,18103,20312,20801,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	108929938	108963450	chr1:108929938-108963450	1	-	108931355	108950437	789624	8	1547,98,222,108,102,140,161,90,	0,13579,13897,17672,19881,20370,32370,33422,
#Partially deleted in new
chr1	108929938	108943527	chr1:108929938-108943527	0	-	108929938	108929938	8553170	2	266,53,	0,13536,
#Partially deleted in new
chr1	108929979	108943882	chr1:108929979-108943882	0	-	108929979	108929979	8553170	6	225,147,98,94,141,47,	0,9656,10065,11425,13495,13856,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	108931985	108950448	chr1:108931985-108950448	3	-	108934669	108950437	789624	11	516,318,342,147,98,94,141,72,108,102,140,	0,2639,5091,7650,8059,9419,11489,11850,15625,17834,18323,
#Partially deleted in new
chr1	108934657	108950448	chr1:108934657-108950448	1	-	108934669	108950437	789624	8	285,342,147,98,94,108,102,140,	0,2419,4978,5387,6747,12953,15162,15651,
#Partially deleted in new
chr1	108934657	108950448	chr1:108934657-108950448	1	-	108934669	108950437	789624	6	285,342,147,108,102,140,	0,2419,4978,12953,15162,15651,
#Partially deleted in new
chr1	108970213	109042075	chr1:108970213-109042075	1	-	108971429	109023512	789624	14	1359,219,132,171,170,158,76,258,179,124,803,85,167,214,	0,4322,11519,12395,13068,16309,21040,25366,32010,34378,40702,43627,53141,71648,
#Partially deleted in new
chr1	108970213	109042075	chr1:108970213-109042075	1	-	108971429	109023512	789624	15	1359,219,132,171,170,158,76,258,179,124,803,85,84,167,214,	0,4322,11519,12395,13068,16309,21040,25366,32010,34378,40702,43627,47304,53141,71648,
#Partially deleted in new
chr1	108970213	109042113	chr1:108970213-109042113	3	-	108971429	109023512	789624	15	1359,219,132,171,170,158,76,258,179,127,803,85,84,167,252,	0,4322,11519,12395,13068,16309,21040,25366,32010,34378,40702,43627,47304,53141,71648,
#Partially deleted in new
chr1	108970213	109041986	chr1:108970213-109041986	1	-	108971429	109023512	789624	15	1359,219,132,171,170,158,76,258,179,127,803,106,84,167,125,	0,4322,11519,12395,13068,16309,21040,25366,32010,34378,40702,43606,47304,53141,71648,
#Partially deleted in new
chr1	108970217	109042102	chr1:108970217-109042102	1	-	108971429	109023512	789624	14	1355,219,132,177,170,158,76,258,179,124,803,85,167,241,	0,4318,11515,12391,13064,16305,21036,25362,32006,34374,40698,43623,53137,71644,
#Deleted in new
chr1	108986962	108987245	chr1:108986962-108987245	7	-	108986962	108986962	16724991	1	283,	0,
#Deleted in new
chr1	108992281	108992836	chr1:108992281-108992836	7	+	108992281	108992281	16724991	1	555,	0,
#Partially deleted in new
chr1	109011526	109041547	chr1:109011526-109041547	0	-	109011526	109023512	789624	5	192,85,84,167,28,	0,2314,5991,11828,29993,
#Partially deleted in new
chr1	109011545	109042105	chr1:109011545-109042105	0	-	109011545	109017540	789624	4	173,85,84,244,	0,2295,5972,30316,
#Partially deleted in new
chr1	109011575	109042102	chr1:109011575-109042102	0	-	109011575	109013867	789624	3	143,85,241,	0,2265,30286,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	109013849	109041986	chr1:109013849-109041986	0	-	109013849	109023512	789624	5	76,84,167,128,125,	0,3668,9505,11015,28012,
#Deleted in new
chr1	109030066	109030319	chr1:109030066-109030319	7	+	109030066	109030066	16724991	1	253,	0,
#Deleted in new
chr1	109046827	109047482	chr1:109046827-109047482	7	+	109046827	109046827	16724991	1	655,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	109062485	109075971	chr1:109062485-109075971	0	-	109064522	109075947	0	5	587,261,98,79,51,	0,1947,3649,12501,13435,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	109064139	109076002	chr1:109064139-109076002	3	-	109064522	109075947	0	4	554,98,79,82,	0,1995,10847,11781,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	109087970	109090858	chr1:109087970-109090858	3	-	109087970	109087970	8553170	1	2888,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	109089802	109096934	chr1:109089802-109096934	3	+	109090872	109094499	789624	3	1080,132,2518,	0,3087,4614,
#Partially deleted in new
chr1	109090779	109094989	chr1:109090779-109094989	0	+	109090779	109090779	789624	4	103,89,132,573,	0,880,2110,3637,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	109090805	109093776	chr1:109090805-109093776	0	+	109090805	109090805	8553170	2	77,887,	0,2084,
#Deleted in new
chr1	109100192	109100612	chr1:109100192-109100612	3	+	109100192	109100192	789624	1	420,	0,
#Deleted in new
chr1	109100192	109100619	chr1:109100192-109100619	3	+	109100192	109100192	8553170	1	427,	0,
#Partially deleted in new
chr1	109103534	109104766	chr1:109103534-109104766	7	-	109103534	109103534	16724991	2	137,472,	0,760,
#Partially deleted in new
chr1	109105950	109112755	chr1:109105950-109112755	1	-	109106027	109112679	789624	5	148,125,116,117,157,	0,584,1056,1970,6648,
#Partially deleted in new
chr1	109105950	109113857	chr1:109105950-109113857	3	-	109106027	109113677	789624	5	148,125,116,117,225,	0,584,1056,1970,7682,
#Partially deleted in new
chr1	109105950	109113844	chr1:109105950-109113844	0	-	109106593	109113677	789624	3	148,125,212,	0,584,7682,
#Partially deleted in new
chr1	109105954	109112747	chr1:109105954-109112747	1	-	109106027	109112679	789624	4	144,125,116,149,	0,580,1052,6644,
#Partially deleted in new
chr1	109105954	109112747	chr1:109105954-109112747	0	-	109106593	109112679	789624	3	144,125,149,	0,580,6644,
#Partially deleted in new
chr1	109106050	109113835	chr1:109106050-109113835	0	-	109106050	109106050	8553170	4	48,588,117,203,	0,484,1870,7582,
#Partially deleted in new
chr1	109113678	109162014	chr1:109113678-109162014	0	+	109114183	109162014	789624	3	237,206,121,	0,452,48215,
#Partially deleted in new
chr1	109113910	109172013	chr1:109113910-109172013	0	+	109114183	109172013	789624	5	82,206,121,193,148,	0,220,47983,50588,57955,
#Partially deleted in new
chr1	109113928	109164681	chr1:109113928-109164681	0	+	109114183	109164681	789624	4	60,206,121,183,	0,202,47965,50570,
#Partially deleted in new
chr1	109113962	109164691	chr1:109113962-109164691	0	+	109114183	109164691	789624	4	30,209,121,193,	0,165,47931,50536,
#Partially deleted in new
chr1	109114000	109203229	chr1:109114000-109203229	3	+	109114183	109203012	789624	22	336,121,193,148,81,106,150,89,178,129,91,106,138,264,174,181,97,102,127,179,166,286,	0,47893,50498,57865,58487,59473,59687,71044,74176,75065,75591,77365,77725,78610,80420,83473,83978,84572,85853,86058,86734,88943,
#Partially deleted in new
chr1	109114106	109200782	chr1:109114106-109200782	0	+	109114183	109200782	789624	20	230,121,193,148,81,106,89,178,129,91,106,138,264,174,181,97,102,127,179,48,	0,47787,50392,57759,58381,59367,70938,74070,74959,75485,77259,77619,78504,80314,83367,83872,84466,85747,85952,86628,
#Partially deleted in new
chr1	109114154	109203105	chr1:109114154-109203105	1	+	109114183	109203012	789624	20	182,121,193,148,81,84,178,129,91,106,138,264,174,181,97,102,127,179,166,162,	0,47739,50344,57711,58333,59319,74022,74911,75437,77211,77571,78456,80266,83319,83824,84418,85699,85904,86580,88789,
#Partially deleted in new
chr1	109114168	109203231	chr1:109114168-109203231	0	+	109114183	109164534	789624	21	168,193,148,81,106,150,89,178,129,91,106,138,264,174,181,97,102,127,179,166,319,	0,50330,57697,58319,59305,59519,70876,74008,74897,75423,77197,77557,78442,80252,83305,83810,84404,85685,85890,86566,88744,
#Partially deleted in new
chr1	109114172	109191605	chr1:109114172-109191605	0	+	109114172	109114172	8553170	10	164,193,148,81,106,150,178,129,91,240,	0,50326,57693,58315,59301,59515,74004,74893,75419,77193,
#Partially deleted in new
chr1	109161605	109164626	chr1:109161605-109164626	0	+	109161605	109161605	8553170	2	409,128,	0,2893,
#Partially deleted in new
chr1	109186548	109203231	chr1:109186548-109203231	0	+	109186548	109186548	8553170	15	1122,178,129,91,106,138,264,174,181,97,102,127,179,166,288,	0,1628,2517,3043,4817,5177,6062,7872,10925,11430,12024,13305,13510,14186,16395,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	109187978	109206781	chr1:109187978-109206781	0	+	109187978	109187978	8553170	14	376,129,91,106,138,264,174,181,97,102,127,179,166,3838,	0,1087,1613,3387,3747,4632,6442,9495,10000,10594,11875,12080,12756,14965,
#Deleted in new
chr1	109191371	109192661	chr1:109191371-109192661	0	+	109191371	109191371	8553170	2	492,51,	0,1239,
#Partially deleted in new
chr1	109200190	109203123	chr1:109200190-109203123	0	+	109200190	109201354	789624	4	47,166,99,180,	0,544,1128,2753,
#Partially deleted in new
chr1	109213917	109238120	chr1:109213917-109238120	3	+	109213992	109237888	0	11	211,71,81,159,144,156,222,130,158,130,390,	0,10060,14434,15496,16960,17713,21292,22059,22473,23326,23813,
#Deleted in new
chr1	109213931	109215153	chr1:109213931-109215153	0	+	109213931	109213931	8553170	2	197,607,	0,615,
#Partially deleted in new
chr1	109213967	109235431	chr1:109213967-109235431	0	+	109213967	109213967	8553170	5	161,71,81,159,222,	0,10010,14384,15446,21242,
#Partially deleted in new
chr1	109213981	109238148	chr1:109213981-109238148	1	+	109213992	109237888	789624	12	147,71,81,159,144,156,222,130,158,66,130,418,	0,9996,14370,15432,16896,17649,21228,21995,22409,22823,23262,23749,
#Partially deleted in new
chr1	109231157	109235431	chr1:109231157-109235431	0	+	109231157	109231157	8553170	2	629,222,	0,4052,
#Deleted in new
chr1	109236230	109238169	chr1:109236230-109238169	0	+	109236230	109236230	8553170	2	1143,439,	0,1500,
#Partially deleted in new
chr1	109250018	109275750	chr1:109250018-109275750	3	+	109250079	109274049	789624	34	3371,648,223,116,89,158,164,126,167,288,175,142,121,184,102,95,210,184,129,181,168,127,201,175,113,80,127,123,128,89,195,171,235,1729,	0,8413,11023,11494,11789,12268,12787,13123,13592,14059,14435,14849,15172,15716,16086,17529,17832,18562,18861,19091,19405,19675,19914,20407,20908,21198,21367,21581,22259,22621,22814,23147,23417,24003,
#Deleted in new
chr1	109265268	109266439	chr1:109265268-109266439	0	+	109265268	109265268	8553170	3	43,184,335,	0,466,836,
#Deleted in new
chr1	109269726	109274309	chr1:109269726-109274309	0	+	109269726	109269726	8553170	9	94,1107,80,337,451,195,171,235,288,	0,206,1490,1659,2551,3106,3439,3709,4295,
#Deleted in new
chr1	109270823	109275607	chr1:109270823-109275607	0	+	109270823	109270823	8553170	5	216,506,128,388,2442,	0,393,1454,1816,2342,
#Deleted in new
chr1	109279555	109283115	chr1:109279555-109283115	1	-	109280120	109282698	789624	8	601,94,140,144,442,58,52,53,	0,840,1221,1552,2063,2962,3124,3507,
#Deleted in new
chr1	109279555	109283147	chr1:109279555-109283147	1	-	109280152	109282698	789624	8	601,94,270,115,442,58,52,85,	0,840,1221,1581,2063,2962,3124,3507,
#Deleted in new
chr1	109279555	109283125	chr1:109279555-109283125	1	-	109280152	109282698	789624	8	601,94,270,115,442,58,52,98,	0,840,1221,1581,2063,2962,3124,3472,
#Deleted in new
chr1	109279556	109283168	chr1:109279556-109283168	3	-	109280152	109282698	789624	8	600,94,270,115,442,58,57,106,	0,839,1220,1580,2062,2961,3123,3506,
#Deleted in new
chr1	109279564	109283186	chr1:109279564-109283186	1	-	109280152	109282698	789624	7	592,94,475,442,58,52,113,	0,831,1212,2054,2953,3115,3509,
#Deleted in new
chr1	109279566	109282419	chr1:109279566-109282419	0	-	109279566	109279566	8553170	5	590,94,270,115,801,	0,829,1210,1570,2052,
#Deleted in new
chr1	109279584	109283122	chr1:109279584-109283122	1	-	109280152	109282698	789624	8	572,94,270,115,442,58,110,49,	0,811,1192,1552,2034,2933,3095,3489,
#Deleted in new
chr1	109280808	109281679	chr1:109280808-109281679	0	-	109280808	109281679	789624	3	161,144,61,	0,299,810,
#Deleted in new
chr1	109280985	109283122	chr1:109280985-109283122	0	-	109280985	109282698	789624	6	61,115,442,58,110,49,	0,151,633,1532,1694,2088,
#Deleted in new
chr1	109281154	109283122	chr1:109281154-109283122	0	-	109281154	109282698	789624	4	97,442,58,443,	0,464,1363,1525,
#Deleted in new
chr1	109281403	109283145	chr1:109281403-109283145	0	-	109281403	109281403	8553170	4	657,58,52,72,	0,1114,1276,1670,
#Deleted in new
chr1	109281618	109283144	chr1:109281618-109283144	0	-	109281618	109281618	8553170	3	442,214,82,	0,899,1444,
#Partially deleted in new
chr1	109292364	109307041	chr1:109292364-109307041	3	-	109294238	109306991	789624	9	224,44,187,137,160,140,196,89,195,	0,1841,2746,3869,4418,4685,5057,5804,14482,
#Partially deleted in new
chr1	109292364	109296353	chr1:109292364-109296353	0	-	109292364	109292364	8553170	4	100,44,187,120,	0,1841,2746,3869,
#Partially deleted in new
chr1	109292514	109306995	chr1:109292514-109306995	0	-	109292514	109292514	8553170	4	491,44,187,149,	0,1691,2596,14332,
#Partially deleted in new
chr1	109309567	109393357	chr1:109309567-109393357	1	-	109314042	109367439	0	20	4490,124,107,109,117,190,191,169,103,107,156,145,128,50,74,165,103,74,60,331,	0,4693,5104,7282,8285,13364,15331,17424,17931,26672,31156,32446,36183,37915,41361,44799,45799,57840,59962,83459,
#Partially deleted in new
chr1	109309569	109397951	chr1:109309569-109397951	3	-	109314042	109397892	0	20	4488,124,107,109,117,190,191,169,103,107,156,145,131,50,74,165,103,74,60,365,	0,4691,5102,7280,8283,13362,15329,17422,17929,26670,31154,32444,36181,37913,41359,44797,45797,57838,59960,88017,
#Partially deleted in new
chr1	109313800	109316927	chr1:109313800-109316927	0	-	109313800	109313800	8553170	3	257,107,78,	0,871,3049,
#Partially deleted in new
chr1	109326805	109336302	chr1:109326805-109336302	0	-	109326805	109326805	8553170	3	355,103,63,	0,693,9434,
#Partially deleted in new
chr1	109350946	109389899	chr1:109350946-109389899	0	-	109350946	109367439	789624	6	56,165,103,74,60,125,	0,3420,4420,16461,18583,38828,
#Partially deleted in new
chr1	109354484	109393357	chr1:109354484-109393357	0	-	109354484	109367439	789624	5	47,103,74,60,331,	0,882,12923,15045,38542,
#Partially deleted in new
chr1	109355440	109392988	chr1:109355440-109392988	0	-	109355440	109367439	789624	4	29,74,60,398,	0,11967,14089,37150,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	109366782	109369589	chr1:109366782-109369589	0	-	109366782	109366782	8553170	2	699,60,	0,2747,
#Partially deleted in new
chr1	109368477	109369589	chr1:109368477-109369589	0	-	109368477	109368477	8553170	2	331,60,	0,1052,
#Partially deleted in new
chr1	109369529	109397861	chr1:109369529-109397861	0	-	109397301	109397861	789624	3	60,134,275,	0,27677,28057,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	109399030	109426351	chr1:109399030-109426351	3	-	109402012	109426330	0	9	3060,87,103,59,108,68,127,67,50,	0,10897,11980,12846,13046,14037,16206,22829,27271,
#Partially deleted in new
chr1	109401849	109426132	chr1:109401849-109426132	0	-	109401849	109401849	8553170	9	241,87,103,59,108,68,127,67,807,	0,8078,9161,10027,10227,11218,13387,20010,23476,
#Partially deleted in new
chr1	109402012	109426132	chr1:109402012-109426132	1	-	109402012	109415285	0	9	78,87,103,59,108,68,127,67,807,	0,7915,8998,9864,10064,11055,13224,19847,23313,
#Deleted in new
chr1	109411869	109412285	chr1:109411869-109412285	0	-	109411869	109411869	8553170	2	66,209,	0,207,
#Partially deleted in new
chr1	109411952	109426427	chr1:109411952-109426427	0	-	109411952	109411952	8553170	4	1183,127,67,126,	0,3284,9907,14349,
#Deleted in new
chr1	109414808	109415365	chr1:109414808-109415365	0	-	109414808	109414808	8553170	2	96,129,	0,428,
#Partially deleted in new
chr1	109466627	109482137	chr1:109466627-109482137	3	+	109466843	109479548	789624	6	270,75,125,202,192,2760,	0,431,8953,10148,11190,12750,
#Deleted in new
chr1	109475241	109476843	chr1:109475241-109476843	0	+	109475241	109475241	8553170	2	464,68,	0,1534,
#Deleted in new
chr1	109483478	109492704	chr1:109483478-109492704	0	+	109483953	109486063	789624	12	602,178,66,105,211,287,83,254,199,122,796,119,	0,1853,2578,3027,3528,4039,4904,5368,6451,6792,7443,9107,
#Deleted in new
chr1	109483938	109492734	chr1:109483938-109492734	3	+	109483953	109492600	789624	11	142,66,105,211,191,83,254,199,122,796,149,	0,2118,2567,3068,3675,4444,4908,5991,6332,6983,8647,
#Deleted in new
chr1	109485545	109492727	chr1:109485545-109492727	0	+	109485545	109485545	8553170	8	1065,211,287,83,1282,122,1183,142,	0,1461,1972,2837,3301,4725,5376,7040,
#Deleted in new
chr1	109489339	109490959	chr1:109489339-109490959	0	+	109489339	109489339	8553170	4	367,199,122,38,	0,590,931,1582,
#Deleted in new
chr1	109489550	109492804	chr1:109489550-109492804	0	+	109489550	109489550	8553170	4	578,122,796,219,	0,720,1371,3035,
#Deleted in new
chr1	109491015	109492734	chr1:109491015-109492734	0	+	109491015	109491015	8553170	3	702,78,149,	0,1011,1570,
#Partially deleted in new
chr1	109494051	109496272	chr1:109494051-109496272	1	+	109494139	109496259	789624	2	103,517,	0,1704,
#Partially deleted in new
chr1	109494078	109498855	chr1:109494078-109498855	1	+	109494139	109495687	789624	3	209,38,3177,	0,1064,1600,
#Partially deleted in new
chr1	109494079	109496555	chr1:109494079-109496555	1	+	109494139	109495867	789624	3	75,38,800,	0,1063,1676,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	109494098	109500433	chr1:109494098-109500433	1	+	109494139	109495867	789624	4	189,104,38,4678,	0,421,1044,1657,
#Partially deleted in new
chr1	109494099	109498855	chr1:109494099-109498855	3	+	109494139	109496259	789624	3	188,38,3100,	0,1043,1656,
#Partially deleted in new
chr1	109494099	109496459	chr1:109494099-109496459	1	+	109494139	109495775	789624	2	188,704,	0,1656,
#Partially deleted in new
chr1	109494104	109502932	chr1:109494104-109502932	1	+	109494139	109502392	789624	4	183,38,500,550,	0,1038,1651,8278,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	109494113	109496562	chr1:109494113-109496562	1	+	109494139	109496259	789624	3	174,104,807,	0,406,1642,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	109494114	109500440	chr1:109494114-109500440	1	+	109494139	109495775	789624	4	173,104,38,4762,	0,405,1028,1564,
#Deleted in new
chr1	109504174	109509682	chr1:109504174-109509682	3	-	109507430	109508912	789624	2	4825,263,	0,5245,
#Deleted in new
chr1	109507067	109509738	chr1:109507067-109509738	1	-	109507430	109508912	789624	2	1910,319,	0,2352,
#Partially deleted in new
chr1	109539871	109545844	chr1:109539871-109545844	0	+	109543022	109544378	789624	3	82,2218,534,	0,2550,5439,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	109539871	109547260	chr1:109539871-109547260	3	+	109543022	109544378	789624	2	82,4839,	0,2550,
#Partially deleted in new
chr1	109539871	109545833	chr1:109539871-109545833	1	+	109543022	109544378	789624	3	82,2218,523,	0,2550,5439,
#Partially deleted in new
chr1	109539886	109545833	chr1:109539886-109545833	1	+	109543022	109544378	789624	4	67,185,1684,523,	0,2535,3069,5424,
#Partially deleted in new
chr1	109539905	109543837	chr1:109539905-109543837	3	-	109539905	109539905	8553170	2	148,434,	0,3498,
#Partially deleted in new
chr1	109539920	109548406	chr1:109539920-109548406	0	+	109543022	109544378	789624	5	33,2218,79,205,22,	0,2501,5390,6807,8464,
#Partially deleted in new
chr1	109539927	109542876	chr1:109539927-109542876	0	+	109539927	109539927	8553170	2	140,455,	0,2494,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	109545310	109547259	chr1:109545310-109547259	0	+	109545310	109545310	8553170	2	63,532,	0,1417,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	109548610	109618321	chr1:109548610-109618321	3	+	109548720	109592233	0	9	228,43,142,158,129,130,154,213,25977,	0,25126,25285,30593,33826,37605,38118,43432,43734,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	109591533	109591640	chr1:109591533-109591640	3	-	109591533	109591533	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	109596224	109597781	chr1:109596224-109597781	3	+	109596224	109596224	8553170	2	174,422,	0,1135,
#Partially deleted in new
chr1	109598892	109598967	chr1:109598892-109598967	3	+	109598892	109598892	5263520	1	75,	0,
#Partially deleted in new
chr1	109603266	109613057	chr1:109603266-109613057	3	-	109603353	109612870	789624	8	278,154,130,129,158,142,43,305,	0,684,2703,3041,5364,6773,7198,9486,
#Partially deleted in new
chr1	109608720	109619929	chr1:109608720-109619929	0	-	109608720	109612870	789624	5	68,142,43,171,42,	0,1319,1744,4032,11167,
#Partially deleted in new
chr1	109616103	109626198	chr1:109616103-109626198	0	+	109620268	109626198	789624	5	132,139,131,131,39,	0,4036,9199,9558,10056,
#Deleted in new
chr1	109619503	109630406	chr1:109619503-109630406	0	+	109619503	109619503	8553170	17	153,139,131,131,69,109,187,142,90,130,195,132,164,127,164,117,174,	0,636,5799,6158,6656,6815,7222,7671,7925,8270,8579,8860,9139,9605,9823,10296,10729,
#Deleted in new
chr1	109619836	109632051	chr1:109619836-109632051	1	+	109620268	109631152	0	18	442,131,131,69,109,187,142,90,130,195,132,164,127,164,121,174,111,1109,	0,5466,5825,6323,6482,6889,7338,7592,7937,8246,8527,8806,9272,9490,9959,10396,10846,11106,
#Deleted in new
chr1	109619845	109621111	chr1:109619845-109621111	0	+	109621107	109621111	8553170	2	433,80,	0,1186,
#Deleted in new
chr1	109619846	109626798	chr1:109619846-109626798	0	+	109626794	109626798	8553170	5	432,131,69,109,73,	0,5815,6313,6472,6879,
#Deleted in new
chr1	109619884	109631152	chr1:109619884-109631152	1	+	109621013	109631152	0	19	394,353,131,131,69,109,187,142,90,130,195,132,164,127,164,121,174,111,210,	0,1029,5418,5777,6275,6434,6841,7290,7544,7889,8198,8479,8758,9224,9442,9911,10348,10798,11058,
#Deleted in new
chr1	109620607	109626349	chr1:109620607-109626349	0	+	109625403	109626349	789624	6	44,169,131,131,69,31,	0,1577,4695,5054,5552,5711,
#Deleted in new
chr1	109620653	109632051	chr1:109620653-109632051	3	+	109621013	109631152	0	18	613,131,131,69,109,187,142,90,130,195,132,164,127,164,121,174,111,1109,	0,4649,5008,5506,5665,6072,6521,6775,7120,7429,7710,7989,8455,8673,9142,9579,10029,10289,
#Deleted in new
chr1	109621073	109631541	chr1:109621073-109631541	1	+	109621107	109631152	0	17	193,131,69,109,187,142,90,130,195,132,164,127,164,121,174,111,599,	0,4588,5086,5245,5652,6101,6355,6700,7009,7290,7569,8035,8253,8722,9159,9609,9869,
#Deleted in new
chr1	109621102	109631698	chr1:109621102-109631698	0	+	109621102	109631152	789624	18	164,131,131,69,109,187,142,90,130,195,132,164,127,164,121,207,111,756,	0,4200,4559,5057,5216,5623,6072,6326,6671,6980,7261,7540,8006,8224,8693,9130,9580,9840,
#Deleted in new
chr1	109621114	109626458	chr1:109621114-109626458	0	+	109621114	109621114	8553170	3	152,131,299,	0,4547,5045,
#Deleted in new
chr1	109621151	109626201	chr1:109621151-109626201	0	+	109621151	109622321	789624	5	115,169,131,131,42,	0,1033,4151,4510,5008,
#Deleted in new
chr1	109621268	109626418	chr1:109621268-109626418	0	+	109621268	109626418	789624	5	154,131,131,69,100,	0,4034,4393,4891,5050,
#Deleted in new
chr1	109623813	109631217	chr1:109623813-109631217	1	+	109625403	109631152	0	18	276,131,131,69,109,187,142,90,130,195,132,164,127,164,121,174,111,275,	0,1489,1848,2346,2505,2912,3361,3615,3960,4269,4550,4829,5295,5513,5982,6419,6869,7129,
#Deleted in new
chr1	109623838	109626417	chr1:109623838-109626417	0	+	109623838	109623838	8553170	4	251,131,69,99,	0,1823,2321,2480,
#Deleted in new
chr1	109625597	109632049	chr1:109625597-109632049	1	+	109625634	109631152	0	16	195,69,109,187,142,90,130,195,132,164,127,164,121,174,111,1107,	0,562,721,1128,1577,1831,2176,2485,2766,3045,3511,3729,4198,4635,5085,5345,
#Deleted in new
chr1	109626070	109626912	chr1:109626070-109626912	0	+	109626070	109626070	8553170	2	357,187,	0,655,
#Deleted in new
chr1	109626197	109627165	chr1:109626197-109627165	0	+	109626197	109626197	8553170	3	31,109,440,	0,121,528,
#Deleted in new
chr1	109626922	109627855	chr1:109626922-109627855	0	+	109626922	109626922	8553170	2	596,82,	0,851,
#Deleted in new
chr1	109627773	109628535	chr1:109627773-109628535	0	+	109627773	109627773	8553170	2	130,453,	0,309,
#Deleted in new
chr1	109628378	109629692	chr1:109628378-109629692	0	+	109628378	109628378	8553170	3	117,164,584,	0,264,730,
#Deleted in new
chr1	109628416	109630305	chr1:109628416-109630305	3	-	109628416	109628416	8553170	3	418,215,55,	0,686,1834,
#Deleted in new
chr1	109628533	109629552	chr1:109628533-109629552	0	+	109628533	109628533	8553170	2	273,444,	0,575,
#Deleted in new
chr1	109628713	109629360	chr1:109628713-109629360	0	+	109628713	109628713	8553170	2	522,34,	0,613,
#Deleted in new
chr1	109629092	109631040	chr1:109629092-109631040	0	+	109629092	109629092	8553170	5	143,164,174,111,98,	0,234,1140,1590,1850,
#Deleted in new
chr1	109629209	109631568	chr1:109629209-109631568	0	+	109629209	109631152	789624	5	26,164,121,174,626,	0,117,586,1023,1733,
#Deleted in new
chr1	109630637	109631500	chr1:109630637-109631500	0	+	109630637	109630637	8553170	2	156,558,	0,305,
#Deleted in new
chr1	109651369	109652099	chr1:109651369-109652099	7	+	109651369	109651369	16724991	1	730,	0,
#Deleted in new
chr1	109656080	109661700	chr1:109656080-109661700	3	+	109656389	109661254	0	8	345,76,65,82,101,96,111,536,	0,631,1134,1509,1691,2733,2919,5084,
#Deleted in new
chr1	109656116	109657671	chr1:109656116-109657671	0	+	109656116	109656116	8553170	4	309,76,65,322,	0,595,1098,1233,
#Deleted in new
chr1	109656117	109657634	chr1:109656117-109657634	0	+	109656117	109656117	8553170	3	308,76,420,	0,594,1097,
#Deleted in new
chr1	109656120	109657971	chr1:109656120-109657971	0	+	109656120	109656120	8553170	4	305,76,65,200,	0,591,1094,1651,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	109656121	109665496	chr1:109656121-109665496	1	+	109656389	109665031	0	8	304,76,65,82,101,96,111,486,	0,590,1093,1468,1650,2692,2878,8889,
#Deleted in new
chr1	109656251	109661700	chr1:109656251-109661700	0	+	109656251	109656251	789624	7	174,76,65,101,96,111,536,	0,460,963,1520,2562,2748,4913,
#Deleted in new
chr1	109656335	109661742	chr1:109656335-109661742	1	+	109657535	109659275	789624	5	90,960,101,96,2743,	0,376,1436,2478,2664,
#Deleted in new
chr1	109656346	109661345	chr1:109656346-109661345	0	+	109656346	109656346	8553170	8	79,76,65,139,101,96,111,181,	0,365,868,1186,1425,2467,2653,4818,
#Partially deleted in new
chr1	109656389	109674836	chr1:109656389-109674836	1	+	109656389	109674836	789624	8	36,76,65,82,101,96,111,90,	0,322,825,1200,1382,2424,2610,18357,
#Partially deleted in new
chr1	109656389	109674836	chr1:109656389-109674836	1	+	109656389	109656422	789624	9	36,76,65,82,23,78,96,111,90,	0,322,825,1200,1382,13104,14897,15083,18357,
#Deleted in new
chr1	109656720	109659324	chr1:109656720-109659324	0	+	109656720	109656720	8553170	5	67,65,101,96,325,	0,494,1051,2093,2279,
#Deleted in new
chr1	109658273	109661338	chr1:109658273-109661338	0	+	109658273	109658273	8553170	3	636,111,174,	0,726,2891,
#Deleted in new
chr1	109658813	109661700	chr1:109658813-109661700	0	+	109658813	109658813	8553170	4	96,111,170,536,	0,186,976,2351,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	109668021	109709549	chr1:109668021-109709549	1	+	109668115	109708576	789624	8	130,76,65,82,101,96,111,1069,	0,403,903,1268,1449,3265,3451,40459,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	109668021	109683997	chr1:109668021-109683997	1	+	109668115	109681817	0	9	130,76,65,82,101,96,111,26,791,	0,403,903,1268,1449,3265,3451,13787,15185,
#Partially deleted in new
chr1	109668035	109675283	chr1:109668035-109675283	1	+	109668115	109674836	789624	7	116,76,65,82,101,96,537,	0,389,889,1254,1435,3251,6711,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	109668050	109702442	chr1:109668050-109702442	1	+	109668115	109681817	0	9	101,76,65,82,101,96,111,26,791,	0,374,874,1239,1420,3236,3422,13758,33601,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	109668053	109670023	chr1:109668053-109670023	0	+	109668053	109668053	8553170	5	98,76,65,82,388,	0,371,871,1236,1582,
#Deleted in new
chr1	109668056	109668848	chr1:109668056-109668848	0	+	109668056	109668056	8553170	2	95,424,	0,368,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	109668060	109670099	chr1:109668060-109670099	0	+	109668060	109668060	8553170	5	91,76,65,82,629,	0,364,864,1229,1410,
#Partially deleted in new
chr1	109668065	109675286	chr1:109668065-109675286	3	+	109668115	109674836	0	8	86,76,65,82,101,96,111,540,	0,359,859,1224,1405,3221,3407,6681,
#Partially deleted in new
chr1	109668082	109671486	chr1:109668082-109671486	0	+	109668115	109671486	789624	7	69,76,65,82,101,69,14,	0,342,842,1207,1388,3231,3390,
#Partially deleted in new
chr1	109668087	109683584	chr1:109668087-109683584	1	+	109669523	109681817	789624	9	64,59,65,82,101,96,111,26,378,	0,337,837,1202,1383,3199,3385,13721,15119,
#Partially deleted in new
chr1	109668091	109673525	chr1:109668091-109673525	1	+	109668115	109673217	789624	8	60,76,65,82,101,96,111,323,	0,333,833,1198,1379,3195,3381,5111,
#Deleted in new
chr1	109668112	109669476	chr1:109668112-109669476	0	+	109668112	109668112	8553170	4	39,76,65,187,	0,312,812,1177,
#Partially deleted in new
chr1	109670658	109675079	chr1:109670658-109675079	0	+	109670658	109670658	8553170	3	724,111,333,	0,814,4088,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	109687813	109709039	chr1:109687813-109709039	0	+	109687813	109687813	8553170	5	96,65,82,101,559,	0,859,1234,1411,20667,
#Partially deleted in new
chr1	109687819	109693745	chr1:109687819-109693745	3	+	109687873	109693295	0	8	90,76,65,82,101,96,111,540,	0,350,853,1228,1405,2451,2634,5386,
#Partially deleted in new
chr1	109687828	109693388	chr1:109687828-109693388	1	+	109687873	109693295	789624	8	81,76,65,139,101,96,111,183,	0,341,844,1162,1396,2442,2625,5377,
#Partially deleted in new
chr1	109687839	109693743	chr1:109687839-109693743	1	+	109687873	109693295	0	7	70,76,65,82,101,96,538,	0,330,833,1208,1385,2431,5366,
#Deleted in new
chr1	109687844	109690319	chr1:109687844-109690319	0	+	109688235	109690319	789624	6	65,129,65,82,101,49,	0,272,828,1203,1380,2426,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	109687844	109708685	chr1:109687844-109708685	1	+	109687873	109689305	789624	5	65,76,65,101,205,	0,325,828,1380,20636,
#Deleted in new
chr1	109687855	109688986	chr1:109687855-109688986	0	+	109687855	109687855	8553170	2	54,817,	0,314,
#Partially deleted in new
chr1	109687857	109693619	chr1:109687857-109693619	1	+	109687873	109693295	789624	6	52,76,65,82,101,414,	0,312,815,1190,1367,5348,
#Deleted in new
chr1	109693116	109693742	chr1:109693116-109693742	3	-	109693116	109693116	8553170	2	350,141,	0,485,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	109705230	109709551	chr1:109705230-109709551	0	+	109705230	109705230	8553170	1	4321,	0,
#Deleted in new
chr1	109711779	109715240	chr1:109711779-109715240	0	+	109712312	109715240	8553170	8	48,56,76,65,82,101,96,111,	0,513,838,1339,1704,1881,3167,3350,
#Deleted in new
chr1	109712254	109718266	chr1:109712254-109718266	3	+	109712312	109717426	789624	8	94,76,65,82,101,96,111,930,	0,363,864,1229,1406,2692,2875,5082,
#Deleted in new
chr1	109712255	109718261	chr1:109712255-109718261	0	+	109712255	109712255	8553170	5	93,948,101,96,3132,	0,362,1405,2691,2874,
#Partially deleted in new
chr1	109712266	109775428	chr1:109712266-109775428	0	+	109712266	109712266	8553170	2	82,357,	0,62805,
#Deleted in new
chr1	109712312	109717426	chr1:109712312-109717426	1	+	109712312	109717426	789624	9	36,76,65,82,50,51,96,111,90,	0,305,806,1171,1348,1640,2634,2817,5024,
#Deleted in new
chr1	109713543	109717838	chr1:109713543-109717838	0	+	109713543	109713543	8553170	2	1499,2709,	0,1586,
#Deleted in new
chr1	109713732	109717731	chr1:109713732-109717731	0	+	109713732	109717343	8553170	5	29,96,111,89,395,	0,1214,1397,2269,3604,
#Deleted in new
chr1	109714615	109717631	chr1:109714615-109717631	0	+	109714615	109714615	8553170	3	427,111,295,	0,514,2721,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	109725819	109775252	chr1:109725819-109775252	3	+	109725819	109725819	8553170	4	249,176,202,181,	0,6355,11120,49252,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	109733931	109740516	chr1:109733931-109740516	3	-	109737070	109740287	0	8	3238,111,96,101,82,65,76,277,	0,3525,3724,4159,4353,5497,5901,6308,
#Partially deleted in new
chr1	109736493	109741038	chr1:109736493-109741038	1	-	109737070	109740287	0	9	676,111,96,101,82,65,76,272,86,	0,963,1162,1597,1791,2935,3339,3746,4459,
#Partially deleted in new
chr1	109736929	109740327	chr1:109736929-109740327	0	-	109736929	109736929	8553170	7	240,111,96,101,82,65,88,	0,527,726,1161,1355,2499,3310,
#Deleted in new
chr1	109736974	109738143	chr1:109736974-109738143	0	-	109736974	109736974	8553170	3	593,96,53,	0,681,1116,
#Partially deleted in new
chr1	109736975	109740301	chr1:109736975-109740301	0	-	109736975	109736975	8553170	7	194,111,96,101,82,65,469,	0,481,680,1115,1309,2453,2857,
#Partially deleted in new
chr1	109737364	109740304	chr1:109737364-109740304	1	-	109737386	109740287	789624	15	28,3,18,12,3,6,6,9,108,96,101,82,65,76,65,	0,29,33,52,65,69,76,84,95,291,726,920,2064,2468,2875,
#Partially deleted in new
chr1	109750079	109763924	chr1:109750079-109763924	1	-	109750390	109761749	0	19	323,133,74,129,109,35,82,149,75,62,115,116,140,56,150,159,65,55,103,	0,580,1198,1574,1915,2606,3037,6937,7401,7722,7864,8236,8444,8982,9158,9598,11415,11639,13742,
#Partially deleted in new
chr1	109750080	109764027	chr1:109750080-109764027	3	-	109750390	109761749	0	19	322,133,74,129,199,35,82,149,75,62,115,116,143,56,150,159,65,55,206,	0,579,1197,1573,1914,2605,3036,6936,7400,7721,7863,8235,8443,8981,9157,9597,11414,11638,13741,
#Partially deleted in new
chr1	109750308	109763904	chr1:109750308-109763904	1	-	109750390	109761749	0	19	94,133,74,129,199,35,82,149,75,62,115,116,140,56,150,159,65,55,83,	0,351,969,1345,1686,2377,2808,6708,7172,7493,7635,8007,8215,8753,8929,9369,11186,11410,13513,
#Deleted in new
chr1	109750355	109751546	chr1:109750355-109751546	0	-	109750355	109750355	8553170	3	47,133,269,	0,304,922,
#Deleted in new
chr1	109751287	109751940	chr1:109751287-109751940	0	-	109751287	109751287	8553170	2	64,287,	0,366,
#Deleted in new
chr1	109751394	109752074	chr1:109751394-109752074	0	-	109751394	109751394	8553170	2	388,80,	0,600,
#Partially deleted in new
chr1	109751532	109763920	chr1:109751532-109763920	0	-	109759874	109761749	789624	16	250,109,35,82,149,75,62,115,140,143,56,150,221,65,55,99,	0,462,1153,1584,5484,5948,6269,6411,6783,6991,7529,7705,8145,9962,10186,12289,
#Deleted in new
chr1	109751758	109752323	chr1:109751758-109752323	0	-	109751758	109751758	8553170	2	24,329,	0,236,
#Deleted in new
chr1	109758354	109759591	chr1:109758354-109759591	0	-	109758354	109758354	8553170	4	77,143,56,354,	0,169,707,883,
#Deleted in new
chr1	109761223	109763923	chr1:109761223-109763923	0	-	109761223	109761223	8553170	3	336,55,102,	0,495,2598,
#Deleted in new
chr1	109810641	109810998	chr1:109810641-109810998	7	-	109810641	109810641	16724991	1	357,	0,
#Deleted in new
chr1	109884175	109886264	chr1:109884175-109886264	3	-	109884175	109884175	8553170	2	410,40,	0,2049,
#Deleted in new
chr1	109895972	109897861	chr1:109895972-109897861	3	+	109895972	109895972	8553170	1	1889,	0,
#Partially deleted in new
chr1	109910241	109921880	chr1:109910241-109921880	0	+	109910367	109921880	789624	5	186,123,63,171,34,	0,4017,5392,7051,11605,
#Partially deleted in new
chr1	109910505	109921913	chr1:109910505-109921913	0	+	109914342	109921913	789624	5	127,123,63,171,67,	0,3753,5128,6787,11341,
#Deleted in new
chr1	109910604	109917425	chr1:109910604-109917425	0	+	109911023	109917425	789624	5	28,250,123,63,133,	0,208,3654,5029,6688,
#Partially deleted in new
chr1	109910632	109930992	chr1:109910632-109930992	3	+	109911023	109925189	0	9	430,123,63,171,148,1025,53,56,2141,	0,3626,5001,6660,11214,12533,14143,14514,18219,
#Partially deleted in new
chr1	109910869	109923599	chr1:109910869-109923599	0	+	109911023	109923599	789624	5	193,63,171,148,434,	0,4764,6423,10977,12296,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	109910898	109926743	chr1:109910898-109926743	1	+	109911023	109925189	0	9	164,123,63,171,148,1025,53,56,681,	0,3360,4735,6394,10948,12267,13877,14248,15164,
#Partially deleted in new
chr1	109910907	109929034	chr1:109910907-109929034	1	+	109911023	109925189	0	9	155,123,63,171,148,131,53,56,183,	0,3351,4726,6385,10939,13152,13868,14239,17944,
#Partially deleted in new
chr1	109910985	109925198	chr1:109910985-109925198	1	+	109911023	109925189	0	9	77,123,63,171,148,546,131,53,52,	0,3273,4648,6307,10861,12180,13074,13790,14161,
#Partially deleted in new
chr1	109915656	109922549	chr1:109915656-109922549	0	+	109915656	109915656	8553170	4	40,171,148,214,	0,1636,6190,6679,
#Partially deleted in new
chr1	109984685	110023735	chr1:109984685-110023735	3	+	109985052	110021680	0	17	487,112,144,101,103,95,107,117,64,89,71,95,99,69,79,121,2062,	0,24348,26528,27676,28211,30077,30739,31658,31981,32809,33260,33687,33866,34365,34862,36045,36988,
#Partially deleted in new
chr1	109984764	110023741	chr1:109984764-110023741	1	+	110009054	110021680	0	17	779,112,144,101,103,95,107,117,64,89,71,95,99,69,79,121,2068,	0,24269,26449,27597,28132,29998,30660,31579,31902,32730,33181,33608,33787,34286,34783,35966,36909,
#Partially deleted in new
chr1	109985014	110015531	chr1:109985014-110015531	0	+	109985014	109985014	8553170	7	158,112,144,76,103,95,107,	0,24019,26199,27372,27882,29748,30410,
#Partially deleted in new
chr1	110004130	110022389	chr1:110004130-110022389	1	+	110009054	110021680	0	17	321,112,144,101,103,95,107,117,64,89,71,95,99,69,79,121,716,	0,4903,7083,8231,8766,10632,11294,12213,12536,13364,13815,14242,14421,14920,15417,16600,17543,
#Partially deleted in new
chr1	110017494	110022045	chr1:110017494-110022045	0	+	110017494	110017494	8553170	5	89,71,79,121,372,	0,451,2053,3236,4179,
#Deleted in new
chr1	110018431	110019090	chr1:110018431-110019090	0	+	110018431	110018431	8553170	2	36,539,	0,120,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr1	110031576	110054639	chr1:110031576-110054639	1	+	110038717	110053912	789624	21	64,70,75,135,121,69,107,128,183,218,66,64,72,75,98,127,101,67,105,205,975,	0,6314,7106,7595,7818,9058,9959,10157,11511,12062,13263,13438,15103,15965,16195,17535,17883,18766,19379,20106,22088,
#Partially deleted in new
chr1	110034615	110054641	chr1:110034615-110054641	3	+	110034637	110053912	789624	21	202,70,75,135,121,69,107,128,183,218,66,64,72,75,98,127,101,67,105,205,977,	0,3275,4067,4556,4779,6019,6920,7118,8472,9023,10224,10399,12064,12926,13156,14496,14844,15727,16340,17067,19049,
#Partially deleted in new
chr1	110034625	110038244	chr1:110034625-110038244	0	+	110034625	110034625	8553170	2	192,354,	0,3265,
#Partially deleted in new
chr1	110034631	110054641	chr1:110034631-110054641	0	+	110034637	110039881	789624	22	186,70,75,135,121,114,69,107,128,183,218,66,64,72,75,98,127,101,67,105,205,977,	0,3259,4051,4540,4763,5192,6003,6904,7102,8456,9007,10208,10383,12048,12910,13140,14480,14828,15711,16324,17051,19033,
#Deleted in new
chr1	110039093	110039717	chr1:110039093-110039717	0	+	110039093	110039093	8553170	2	213,323,	0,301,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	110041170	110074641	chr1:110041170-110074641	0	+	110041170	110041170	8553170	14	691,183,218,66,64,72,75,98,1298,105,205,1138,142,515,	0,1917,2468,3669,3844,5509,6371,6601,7941,9785,10512,12494,31284,32956,
#Partially deleted in new
chr1	110042873	110046744	chr1:110042873-110046744	0	+	110042873	110042873	8553170	5	397,218,66,64,65,	0,765,1966,2141,3806,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	110043711	110045497	chr1:110043711-110045497	0	+	110043711	110043711	8553170	3	145,66,483,	0,1128,1303,
#Deleted in new
chr1	110047572	110048304	chr1:110047572-110048304	0	+	110047572	110047572	8553170	2	44,533,	0,199,
#Deleted in new
chr1	110058339	110062555	chr1:110058339-110062555	3	+	110058339	110058339	8553170	1	4216,	0,
#Deleted in new
chr1	110059993	110070700	chr1:110059993-110070700	3	-	110060732	110070612	789624	4	1048,129,317,365,	0,1441,4593,10342,
#Deleted in new
chr1	110059993	110070672	chr1:110059993-110070672	1	-	110060732	110070612	8553170	4	1048,129,317,337,	0,1441,4593,10342,
#Deleted in new
chr1	110060396	110064924	chr1:110060396-110064924	1	-	110060732	110064751	8553170	3	645,129,338,	0,1038,4190,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	110082687	110109719	chr1:110082687-110109719	3	+	110082687	110082687	789624	4	165,184,115,115,	0,26157,26611,26917,
#Deleted in new
chr1	110112467	110113945	chr1:110112467-110113945	3	+	110112534	110113059	789624	1	1478,	0,
#Partially deleted in new
chr1	110150485	110202202	chr1:110150485-110202202	3	+	110166929	110198444	789624	12	398,373,158,127,182,111,242,193,193,160,163,4127,	0,16357,21574,23487,24293,26143,41486,42020,44093,45100,46951,47590,
#Deleted in new
chr1	110166185	110167183	chr1:110166185-110167183	0	-	110166185	110166185	8553170	2	129,353,	0,645,
#Partially deleted in new
chr1	110166806	110172489	chr1:110166806-110172489	3	-	110166806	110166806	8553170	2	387,410,	0,5273,
#Partially deleted in new
chr1	110167080	110168220	chr1:110167080-110168220	0	-	110167080	110167080	8553170	2	113,71,	0,1069,
#Deleted in new
chr1	110192567	110194988	chr1:110192567-110194988	0	+	110192567	110192567	8553170	2	131,410,	0,2011,
#Deleted in new
chr1	110208833	110209987	chr1:110208833-110209987	3	-	110208833	110208833	789624	2	371,377,	0,777,
#Partially deleted in new
chr1	110211342	110234044	chr1:110211342-110234044	0	+	110211499	110232309	0	5	835,937,204,377,1134,	0,11621,14632,20878,21568,
#Partially deleted in new
chr1	110211342	110224083	chr1:110211342-110224083	0	+	110211342	110211342	8553170	2	835,1120,	0,11621,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	110211472	110249124	chr1:110211472-110249124	1	+	110211499	110232309	0	4	705,937,204,16904,	0,11491,14502,20748,
#Partially deleted in new
chr1	110211491	110234039	chr1:110211491-110234039	1	+	110211499	110232904	789624	4	686,937,204,1191,	0,11472,14483,21357,
#Partially deleted in new
chr1	110211499	110234044	chr1:110211499-110234044	3	+	110211499	110232972	0	4	678,937,204,1134,	0,11464,14475,21411,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	110212147	110283100	chr1:110212147-110283100	0	+	110212147	110212147	8553170	3	30,121,100,	0,70386,70853,
#Deleted in new
chr1	110219715	110234044	chr1:110219715-110234044	0	+	110219715	110219715	8553170	2	6463,1134,	0,13195,
#Deleted in new
chr1	110223829	110229151	chr1:110223829-110229151	0	+	110223829	110228699	789624	3	71,204,619,	0,2145,4703,
#Deleted in new
chr1	110256753	110256930	chr1:110256753-110256930	7	+	110256753	110256753	16724991	1	177,	0,
#Deleted in new
chr1	110272483	110272607	chr1:110272483-110272607	3	+	110272483	110272483	8553170	1	124,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	110286374	110339171	chr1:110286374-110339171	3	-	110286374	110286374	789624	4	2197,121,118,175,	0,6012,32390,52622,
#Deleted in new
chr1	110338505	110346677	chr1:110338505-110346677	3	+	110339405	110345609	789624	3	3763,111,370,	0,7033,7802,
#Deleted in new
chr1	110339322	110346677	chr1:110339322-110346677	1	+	110339405	110346354	789624	2	2946,370,	0,6985,
#Deleted in new
chr1	110339322	110342690	chr1:110339322-110342690	1	+	110339405	110342279	789624	1	3368,	0,
#Deleted in new
chr1	110339322	110346681	chr1:110339322-110346681	1	+	110339405	110345609	789624	3	2946,111,374,	0,6216,6985,
#Deleted in new
chr1	110339465	110346677	chr1:110339465-110346677	1	+	110339537	110345609	789624	3	2803,111,370,	0,6073,6842,
#Partially deleted in new
chr1	110347115	110418362	chr1:110347115-110418362	0	+	110347115	110347115	8553170	3	772,156,116,	0,8760,71131,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	110362847	110391082	chr1:110362847-110391082	3	-	110363765	110389323	789624	9	1046,94,212,504,162,144,133,119,218,	0,12610,14102,16005,18134,18804,19986,26389,28017,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	110362850	110391082	chr1:110362850-110391082	1	-	110363770	110389270	789624	7	1063,94,212,504,162,119,218,	0,12607,14099,16002,18131,26386,28014,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	110362850	110391082	chr1:110362850-110391082	1	-	110363765	110389270	789624	8	1043,94,212,504,162,144,119,218,	0,12607,14099,16002,18131,18801,26386,28014,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	110362859	110391048	chr1:110362859-110391048	1	-	110363765	110389323	789624	8	1034,94,212,162,144,133,119,184,	0,12598,14090,18122,18792,19974,26377,28005,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	110362859	110391061	chr1:110362859-110391061	0	-	110381708	110389323	789624	7	1034,94,212,162,144,119,197,	0,12598,14090,18122,18792,26377,28005,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	110362859	110391026	chr1:110362859-110391026	1	-	110363765	110389323	789624	8	1034,94,212,504,162,133,119,162,	0,12598,14090,15993,18122,19974,26377,28005,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	110363625	110391047	chr1:110363625-110391047	0	-	110381101	110389323	789624	7	288,94,212,504,162,119,183,	0,11832,13324,15227,17356,25611,27239,
#Partially deleted in new
chr1	110363761	110391048	chr1:110363761-110391048	0	-	110381708	110389323	789624	8	132,94,212,504,162,144,119,184,	0,11696,13188,15091,17220,17890,25475,27103,
#Deleted in new
chr1	110370153	110373003	chr1:110370153-110373003	3	+	110370153	110370153	8553170	1	2850,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	110375035	110379183	chr1:110375035-110379183	0	-	110375434	110379183	789624	3	516,212,331,	0,1914,3817,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	110378943	110391022	chr1:110378943-110391022	0	-	110378943	110378943	8553170	4	413,93,119,158,	0,853,10293,11921,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	110382818	110418362	chr1:110382818-110418362	0	+	110382818	110382818	8553170	6	182,121,80,180,152,116,	0,29354,31333,33190,34670,35428,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	110401248	110407694	chr1:110401248-110407694	0	-	110401248	110401248	8553170	3	335,118,1377,	0,2670,5069,
#Partially deleted in new
chr1	110401248	110407671	chr1:110401248-110407671	1	-	110401522	110407064	789624	4	335,118,62,639,	0,2670,5069,5784,
#Partially deleted in new
chr1	110401248	110407668	chr1:110401248-110407668	1	-	110401522	110407064	789624	5	335,118,62,96,83,	0,2670,5069,5784,6337,
#Partially deleted in new
chr1	110401252	110407942	chr1:110401252-110407942	3	-	110401522	110407866	0	4	331,118,62,357,	0,2666,5065,6333,
#Partially deleted in new
chr1	110401252	110407708	chr1:110401252-110407708	1	-	110401522	110407620	0	4	331,118,62,123,	0,2666,5065,6333,
#Partially deleted in new
chr1	110401256	110406425	chr1:110401256-110406425	1	-	110401522	110406378	789624	3	327,118,108,	0,2662,5061,
#Partially deleted in new
chr1	110401256	110407924	chr1:110401256-110407924	1	-	110401522	110407866	0	4	327,118,62,339,	0,2662,5061,6329,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	110403608	110407664	chr1:110403608-110407664	0	-	110403608	110403608	8553170	3	428,62,79,	0,2709,3977,
#Partially deleted in new
chr1	110407524	110416274	chr1:110407524-110416274	1	+	110407524	110407524	789624	3	430,121,266,	0,4648,8484,
#Partially deleted in new
chr1	110407627	110416089	chr1:110407627-110416089	1	+	110407627	110407627	8553170	4	188,121,80,81,	0,4545,6524,8381,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	110407819	110418313	chr1:110407819-110418313	0	+	110407819	110407819	8553170	6	135,121,90,180,152,67,	0,4353,5501,8189,9669,10427,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	110407827	110418314	chr1:110407827-110418314	0	+	110407827	110407827	8553170	6	127,121,80,180,152,68,	0,4345,6324,8181,9661,10419,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	110407828	110418307	chr1:110407828-110418307	0	+	110407828	110407828	8553170	7	126,121,90,80,180,152,61,	0,4344,5492,6323,8180,9660,10418,
#Partially deleted in new
chr1	110407839	110412498	chr1:110407839-110412498	1	+	110407839	110407839	8553170	2	115,326,	0,4333,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	110407847	110418314	chr1:110407847-110418314	0	+	110407847	110407847	8553170	4	107,121,152,68,	0,4325,9641,10399,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	110407849	110418314	chr1:110407849-110418314	0	+	110407849	110407849	8553170	6	105,237,121,80,180,68,	0,1072,4323,6302,8159,10397,
#Partially deleted in new
chr1	110407874	110418307	chr1:110407874-110418307	0	+	110407874	110407874	8553170	4	80,121,180,61,	0,4298,8134,10372,
#Partially deleted in new
chr1	110407917	110418362	chr1:110407917-110418362	0	+	110407917	110407917	8553170	6	37,77,121,80,180,116,	0,3527,4255,6234,8091,10329,
#Partially deleted in new
chr1	110408135	110418314	chr1:110408135-110418314	0	+	110408135	110408135	8553170	5	92,121,80,180,68,	0,4037,6016,7873,10111,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	110408376	110418314	chr1:110408376-110418314	2	+	110408376	110408376	8553170	2	782,68,	0,9870,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	110408604	110418311	chr1:110408604-110418311	0	+	110408604	110408604	8553170	4	554,121,180,65,	0,3568,7404,9642,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	110408652	110418312	chr1:110408652-110418312	0	+	110408652	110408652	8553170	5	506,121,80,180,66,	0,3520,5499,7356,9594,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	110408969	110416272	chr1:110408969-110416272	1	+	110408969	110408969	8553170	3	189,121,264,	0,3203,7039,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	110411019	110418356	chr1:110411019-110418356	0	+	110411019	110411019	8553170	5	502,121,56,180,110,	0,1153,2019,4989,7227,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	110412014	110416186	chr1:110412014-110416186	1	+	110412014	110412014	8553170	2	279,178,	0,3994,
#Partially deleted in new
chr1	110412176	110416274	chr1:110412176-110416274	1	+	110412176	110412176	8553170	3	117,80,266,	0,1975,3832,
#Partially deleted in new
chr1	110412934	110418274	chr1:110412934-110418274	0	+	110412934	110412934	8553170	2	160,28,	0,5312,
#Partially deleted in new
chr1	110412941	110418293	chr1:110412941-110418293	0	+	110412941	110412941	8553170	3	153,180,47,	0,3067,5305,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	110412969	110418313	chr1:110412969-110418313	0	+	110412969	110412969	8553170	5	125,80,180,152,67,	0,1182,3039,4519,5277,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	110412992	110422024	chr1:110412992-110422024	1	+	110412992	110412992	8553170	5	102,80,180,129,390,	0,1159,3016,5254,8642,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	110413030	110418311	chr1:110413030-110418311	0	+	110413030	110413030	8553170	6	64,80,180,152,98,65,	0,1121,2978,4458,4788,5216,
#Partially deleted in new
chr1	110413848	110418303	chr1:110413848-110418303	0	+	110413848	110413848	8553170	3	383,180,57,	0,2160,4398,
#Partially deleted in new
chr1	110415609	110418362	chr1:110415609-110418362	0	+	110415609	110415609	8553170	2	579,116,	0,2637,
#Partially deleted in new
chr1	110416062	110431706	chr1:110416062-110431706	0	+	110416062	110416062	8553170	4	126,129,459,45,	0,2184,9546,15599,
#Partially deleted in new
chr1	110416062	110425999	chr1:110416062-110425999	0	+	110416062	110416062	8553170	3	126,120,386,	0,2184,9551,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	110416062	110423526	chr1:110416062-110423526	0	+	110416062	110416062	8553170	3	126,120,58,	0,2184,7406,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	110416062	110426192	chr1:110416062-110426192	0	+	110416062	110416062	8553170	4	126,120,82,584,	0,2184,5572,9546,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	110416070	110443778	chr1:110416070-110443778	0	+	110416070	110416070	8553170	3	118,437,293,	0,26523,27415,
#Partially deleted in new
chr1	110416090	110437745	chr1:110416090-110437745	0	+	110416090	110416090	8553170	3	98,120,634,	0,2156,21021,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	110416090	110418673	chr1:110416090-110418673	0	+	110416090	110416090	8553170	2	98,427,	0,2156,
#Partially deleted in new
chr1	110416090	110431906	chr1:110416090-110431906	0	+	110416090	110416090	8553170	4	98,129,276,245,	0,2156,13700,15571,
#Partially deleted in new
chr1	110416090	110432246	chr1:110416090-110432246	0	+	110416090	110416090	8553170	4	98,120,85,585,	0,2156,15186,15571,
#Partially deleted in new
chr1	110416090	110425438	chr1:110416090-110425438	0	+	110416090	110416090	8553170	3	98,120,130,	0,2156,9218,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	110416091	110421638	chr1:110416091-110421638	0	+	110416091	110416091	8553170	3	97,120,286,	0,2155,5261,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	110416094	110423878	chr1:110416094-110423878	0	+	110416094	110416094	8553170	3	94,120,224,	0,2152,7560,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	110416126	110432360	chr1:110416126-110432360	0	+	110416126	110416126	8553170	3	62,120,699,	0,2120,15535,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	110416154	110443111	chr1:110416154-110443111	1	+	110416154	110416154	8553170	3	34,120,704,	0,2092,26253,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	110417488	110426085	chr1:110417488-110426085	1	+	110417488	110417488	8553170	3	152,120,477,	0,758,8120,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	110417499	110437621	chr1:110417499-110437621	1	+	110417499	110417499	8553170	3	141,129,510,	0,747,19612,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	110417578	110437632	chr1:110417578-110437632	1	+	110417578	110417578	8553170	3	62,120,521,	0,668,19533,
#Partially deleted in new
chr1	110418276	110430482	chr1:110418276-110430482	1	+	110418276	110418276	8553170	2	90,374,	0,11832,
#Deleted in new
chr1	110425970	110426775	chr1:110425970-110426775	1	+	110425970	110425970	8553170	1	805,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	110442763	110443817	chr1:110442763-110443817	1	+	110442763	110442763	8553170	2	267,241,	0,813,
#Partially deleted in new
chr1	110451199	110457354	chr1:110451199-110457354	3	+	110451216	110456351	789624	3	89,126,1123,	0,2761,5032,
#Deleted in new
chr1	110456504	110457354	chr1:110456504-110457354	3	-	110456504	110456504	8553170	2	173,309,	0,541,
#Deleted in new
chr1	110472542	110474966	chr1:110472542-110474966	3	+	110472542	110472542	8553170	4	320,228,139,259,	0,1024,1401,2165,
#Partially deleted in new
chr1	110473755	110488663	chr1:110473755-110488663	3	+	110473755	110473755	8553170	8	39,139,151,118,146,252,200,141,	0,188,9019,10158,10720,11071,13130,14767,
#Deleted in new
chr1	110473775	110474980	chr1:110473775-110474980	0	+	110473775	110473775	8553170	3	19,139,273,	0,168,932,
#Partially deleted in new
chr1	110480751	110491277	chr1:110480751-110491277	7	+	110480751	110480751	16724991	9	76,151,118,118,200,112,145,99,244,	0,2023,3162,4075,6134,7771,8675,9420,10282,
#Deleted in new
chr1	110487040	110491272	chr1:110487040-110491272	4	+	110487040	110487040	16724991	5	45,112,145,99,239,	0,1482,2386,3131,3993,
#Deleted in new
chr1	110487679	110490258	chr1:110487679-110490258	3	-	110487679	110487679	789624	2	2228,123,	0,2456,
#Deleted in new
chr1	110488528	110491270	chr1:110488528-110491270	4	+	110488528	110488528	16724991	3	106,99,237,	0,1643,2505,
#Deleted in new
chr1	110517216	110519175	chr1:110517216-110519175	3	-	110517251	110518787	789624	1	1959,	0,
#Partially deleted in new
chr1	110519836	110606354	chr1:110519836-110606354	0	-	110519836	110519836	8553170	9	955,342,24,399,200,1588,85,332,127,	0,1827,2438,12913,16779,18106,57252,85554,86391,
#Partially deleted in new
chr1	110557398	110604890	chr1:110557398-110604890	0	-	110557398	110557398	8553170	3	37,85,998,	0,19690,46494,
#Partially deleted in new
chr1	110567050	110607629	chr1:110567050-110607629	0	-	110567050	110567050	8553170	3	65,332,29,	0,38340,40550,
#Partially deleted in new
chr1	110574470	110604550	chr1:110574470-110604550	0	-	110574470	110574470	8553170	3	446,85,658,	0,2618,29422,
#Partially deleted in new
chr1	110593579	110631474	chr1:110593579-110631474	1	-	110593892	110604782	789624	5	349,141,1057,332,80,	0,8450,10309,11811,37815,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	110593579	110607429	chr1:110593579-110607429	3	-	110603282	110604782	789624	3	11366,332,179,	0,11811,13671,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	110593659	110607307	chr1:110593659-110607307	1	-	110603282	110604020	789624	3	10447,332,57,	0,11731,13591,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	110596334	110606009	chr1:110596334-110606009	1	-	110601960	110604020	789624	3	5836,218,619,	0,7554,9056,
#Deleted in new
chr1	110599440	110607368	chr1:110599440-110607368	1	-	110603282	110604200	789624	3	4806,332,118,	0,5950,7810,
#Deleted in new
chr1	110601815	110606850	chr1:110601815-110606850	1	-	110602118	110604020	789624	4	355,214,332,623,	0,2077,3575,4412,
#Deleted in new
chr1	110602295	110606019	chr1:110602295-110606019	1	-	110603282	110604782	789624	2	2650,629,	0,3095,
#Deleted in new
chr1	110602919	110606696	chr1:110602919-110606696	1	-	110603282	110604782	789624	3	2026,332,469,	0,2471,3308,
#Deleted in new
chr1	110602996	110608025	chr1:110602996-110608025	1	-	110603282	110604782	789624	3	1949,332,145,	0,2394,4884,
#Deleted in new
chr1	110602997	110607816	chr1:110602997-110607816	1	-	110603282	110604782	789624	3	1948,332,216,	0,2393,4603,
#Deleted in new
chr1	110603060	110605571	chr1:110603060-110605571	1	-	110603282	110604416	789624	2	1403,181,	0,2330,
#Deleted in new
chr1	110653559	110657040	chr1:110653559-110657040	3	-	110653559	110653559	8553170	1	3481,	0,
#Deleted in new
chr1	110672464	110675033	chr1:110672464-110675033	3	-	110673081	110674809	0	1	2569,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	110764407	110764506	chr1:110764407-110764506	3	-	110764407	110764407	8553170	1	99,	0,
#Deleted in new
chr1	110848076	110848941	chr1:110848076-110848941	7	-	110848076	110848076	16724991	1	865,	0,
#Deleted in new
chr1	110853938	110854892	chr1:110853938-110854892	7	+	110853938	110853938	16724991	1	954,	0,
#Partially deleted in new
chr1	110871187	110899922	chr1:110871187-110899922	3	+	110891408	110899195	789624	9	72,93,80,189,75,96,81,84,799,	0,1968,20204,21157,23139,23772,25465,26621,27936,
#Partially deleted in new
chr1	110873153	110899928	chr1:110873153-110899928	1	+	110891408	110899195	789624	8	95,80,189,75,96,81,84,805,	0,18238,19191,21173,21806,23499,24655,25970,
#Partially deleted in new
chr1	110873182	110892855	chr1:110873182-110892855	0	+	110873182	110873182	8553170	3	66,80,511,	0,18209,19162,
#Partially deleted in new
chr1	110880236	110899514	chr1:110880236-110899514	0	+	110880236	110880236	8553170	4	96,80,189,391,	0,11155,12108,18887,
#Partially deleted in new
chr1	110894308	110899851	chr1:110894308-110899851	0	+	110894308	110894308	8553170	3	93,96,728,	0,651,4815,
#Partially deleted in new
chr1	110897669	110899316	chr1:110897669-110899316	0	+	110897669	110897669	8553170	2	223,193,	0,1454,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	110936368	110942353	chr1:110936368-110942353	3	-	110936368	110936368	8553170	1	5985,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	110943466	110952848	chr1:110943466-110952848	3	+	110943466	110943466	8553170	2	1694,665,	0,8717,
#Partially deleted in new
chr1	110947184	110964079	chr1:110947184-110964079	3	-	110947958	110963688	789624	4	1215,273,1528,459,	0,2666,4103,16436,
#Partially deleted in new
chr1	110947190	110952961	chr1:110947190-110952961	1	-	110947958	110950111	789624	3	1209,273,430,	0,2660,5341,
#Partially deleted in new
chr1	110947221	110963965	chr1:110947221-110963965	1	-	110947958	110950111	789624	3	1178,273,345,	0,2629,16399,
#Deleted in new
chr1	110963301	110964649	chr1:110963301-110964649	3	+	110963301	110963301	8553170	1	1348,	0,
#Partially deleted in new
chr1	111007699	111015530	chr1:111007699-111015530	7	-	111007699	111007699	16724991	3	414,653,248,	0,6777,7583,
#Deleted in new
chr1	111041833	111041925	chr1:111041833-111041925	7	+	111041833	111041833	16724991	1	92,	0,
#Partially deleted in new
chr1	111117332	111140040	chr1:111117332-111140040	1	-	111118159	111131554	789624	9	935,93,83,178,140,68,145,64,540,	0,1472,2544,3183,7409,8894,14091,20190,22168,
#Partially deleted in new
chr1	111117332	111140203	chr1:111117332-111140203	0	-	111117332	111117332	789624	9	935,93,83,178,140,68,145,64,166,	0,1472,2544,3183,7409,8894,14091,20190,22705,
#Partially deleted in new
chr1	111117334	111140216	chr1:111117334-111140216	3	-	111118159	111131554	789624	9	933,93,83,178,140,68,145,64,179,	0,1470,2542,3181,7407,8892,14089,20188,22703,
#Partially deleted in new
chr1	111118123	111128027	chr1:111118123-111128027	0	-	111118123	111118123	8553170	6	144,93,83,178,68,45,	0,681,1753,2392,8103,9859,
#Partially deleted in new
chr1	111118212	111140095	chr1:111118212-111140095	0	-	111122641	111131554	789624	9	55,93,83,178,28,68,145,64,53,	0,592,1664,2303,4403,8014,13211,19310,21830,
#Deleted in new
chr1	111118559	111120596	chr1:111118559-111120596	0	-	111118559	111118559	8553170	3	338,83,81,	0,1317,1956,
#Deleted in new
chr1	111118864	111120600	chr1:111118864-111120600	0	-	111118864	111118864	8553170	4	33,67,83,85,	0,750,1012,1651,
#Partially deleted in new
chr1	111120515	111139520	chr1:111120515-111139520	0	-	111120515	111120515	8553170	6	178,68,145,64,58,20,	0,5711,10908,17007,18550,18985,
#Partially deleted in new
chr1	111120551	111140114	chr1:111120551-111140114	0	-	111120551	111120551	8553170	7	142,140,68,145,64,166,77,	0,4190,5675,10872,16971,18949,19486,
#Partially deleted in new
chr1	111125377	111140090	chr1:111125377-111140090	0	-	111125377	111125377	8553170	6	273,68,145,64,166,53,	0,849,6046,12145,14123,14660,
#Partially deleted in new
chr1	111125388	111140062	chr1:111125388-111140062	0	-	111125388	111125388	8553170	6	262,68,145,64,124,25,	0,838,6035,12134,14199,14649,
#Partially deleted in new
chr1	111139626	111184808	chr1:111139626-111184808	0	+	111139626	111139626	8553170	9	135,412,148,142,85,132,159,126,618,	0,8015,19753,21528,35252,42560,43172,43835,44564,
#Partially deleted in new
chr1	111139626	111185102	chr1:111139626-111185102	3	+	111147714	111184310	789624	9	135,412,148,142,85,132,159,126,912,	0,8015,19753,21528,35252,42560,43172,43835,44564,
#Partially deleted in new
chr1	111139654	111160970	chr1:111139654-111160970	0	+	111139654	111139654	8553170	3	107,412,1591,	0,7987,19725,
#Partially deleted in new
chr1	111139733	111161196	chr1:111139733-111161196	0	+	111139733	111139733	8553170	4	181,412,148,42,	0,7908,19646,21421,
#Partially deleted in new
chr1	111140225	111185102	chr1:111140225-111185102	1	+	111147714	111184310	789624	9	82,412,148,142,85,132,159,126,912,	0,7416,19154,20929,34653,41961,42573,43236,43965,
#Partially deleted in new
chr1	111140544	111174963	chr1:111140544-111174963	0	+	111140544	111140544	8553170	5	64,412,148,142,85,	0,7097,18835,20610,34334,
#Partially deleted in new
chr1	111143481	111185102	chr1:111143481-111185102	0	+	111143481	111143481	8553170	9	64,407,148,142,85,132,159,126,912,	0,4165,15898,17673,31397,38705,39317,39980,40709,
#Partially deleted in new
chr1	111147676	111184988	chr1:111147676-111184988	1	+	111147714	111182316	789624	9	377,148,142,85,111,20,159,126,798,	0,11703,13478,27202,34510,34622,35122,35785,36514,
#Partially deleted in new
chr1	111173137	111184331	chr1:111173137-111184331	0	+	111173137	111173137	8553170	6	121,85,132,159,126,141,	0,1741,9049,9661,10324,11053,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	111178213	111185100	chr1:111178213-111185100	0	+	111178213	111178213	8553170	4	4105,159,126,910,	0,4585,5248,5977,
#Deleted in new
chr1	111181373	111181491	chr1:111181373-111181491	3	-	111181373	111181373	8553170	1	118,	0,
#Deleted in new
chr1	111182536	111183551	chr1:111182536-111183551	0	+	111182536	111182536	8553170	2	421,90,	0,925,
#Deleted in new
chr1	111184414	111185061	chr1:111184414-111185061	3	-	111184414	111184414	8553170	1	647,	0,
#Partially deleted in new
chr1	111187173	111200689	chr1:111187173-111200689	1	-	111187604	111200459	789624	12	508,240,85,42,178,149,141,78,70,113,176,297,	0,957,1528,2038,4966,7404,8742,10002,10746,11456,12449,13219,
#Partially deleted in new
chr1	111187173	111204409	chr1:111187173-111204409	3	-	111187604	111204353	789624	12	508,240,85,42,178,149,141,78,70,113,176,114,	0,957,1528,2038,4966,7404,8742,10002,10746,11456,12449,17122,
#Deleted in new
chr1	111187173	111189328	chr1:111187173-111189328	0	-	111187173	111187173	8553170	4	508,240,85,117,	0,957,1528,2038,
#Deleted in new
chr1	111195138	111200546	chr1:111195138-111200546	0	-	111195138	111195138	8553170	5	690,2074,113,176,154,	0,777,3491,4484,5254,
#Partially deleted in new
chr1	111195913	111204302	chr1:111195913-111204302	0	-	111195913	111195913	8553170	6	143,78,70,113,176,157,	0,1262,2006,2716,3709,8232,
#Deleted in new
chr1	111195969	111200121	chr1:111195969-111200121	0	-	111195969	111195969	8553170	5	87,78,70,113,499,	0,1206,1950,2660,3653,
#Partially deleted in new
chr1	111197918	111204535	chr1:111197918-111204535	0	-	111197918	111197918	8553170	5	71,113,176,51,390,	0,711,1704,4476,6227,
#Deleted in new
chr1	111197919	111200243	chr1:111197919-111200243	0	-	111197919	111197919	8553170	4	70,113,176,329,	0,710,1703,1995,
#Partially deleted in new
chr1	111200770	111243439	chr1:111200770-111243439	3	+	111227729	111242364	0	13	615,85,111,30,202,57,151,125,130,183,117,140,223,	0,25173,26888,29081,29971,30467,34136,34868,35253,37979,40556,41456,42446,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	111227015	111236080	chr1:111227015-111236080	0	+	111227729	111236080	789624	8	117,207,30,202,57,151,125,57,	0,547,2836,3726,4222,7891,8623,9008,
#Partially deleted in new
chr1	111227609	111243440	chr1:111227609-111243440	1	+	111227729	111242364	0	10	160,202,57,151,125,130,183,117,140,224,	0,3132,3628,7297,8029,8414,11140,13717,14617,15607,
#Partially deleted in new
chr1	111227658	111243438	chr1:111227658-111243438	1	+	111227729	111242364	0	11	111,30,202,57,151,125,130,183,117,140,222,	0,2193,3083,3579,7248,7980,8365,11091,13668,14568,15558,
#Partially deleted in new
chr1	111227677	111235763	chr1:111227677-111235763	0	+	111227729	111235763	789624	6	92,30,202,57,94,125,	0,2174,3064,3560,7229,7961,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	111229691	111243439	chr1:111229691-111243439	1	+	111230908	111242364	0	10	190,202,57,151,125,130,183,117,140,223,	0,1050,1546,5215,5947,6332,9058,11635,12535,13525,
#Partially deleted in new
chr1	111229705	111238759	chr1:111229705-111238759	0	+	111230908	111238759	789624	8	52,30,202,57,151,125,130,10,	0,146,1036,1532,5201,5933,6318,9044,
#Partially deleted in new
chr1	111229752	111236148	chr1:111229752-111236148	0	+	111230908	111236148	789624	5	129,202,151,125,125,	0,989,5154,5886,6271,
#Partially deleted in new
chr1	111229756	111235763	chr1:111229756-111235763	0	+	111230908	111235763	789624	5	54,202,57,151,125,	0,985,1481,5150,5882,
#Partially deleted in new
chr1	111229777	111231472	chr1:111229777-111231472	0	+	111229777	111229777	8553170	3	104,202,235,	0,964,1460,
#Partially deleted in new
chr1	111229787	111231114	chr1:111229787-111231114	0	+	111229787	111229787	8553170	2	94,373,	0,954,
#Partially deleted in new
chr1	111229819	111242634	chr1:111229819-111242634	1	+	111230908	111242364	0	9	62,202,57,151,125,130,183,117,408,	0,922,1418,5087,5819,6204,8930,11507,12407,
#Partially deleted in new
chr1	111230765	111238866	chr1:111230765-111238866	0	+	111230765	111238866	789624	4	178,57,130,117,	0,472,5258,7984,
#Partially deleted in new
chr1	111235015	111243440	chr1:111235015-111243440	0	+	111235015	111242364	789624	6	42,125,130,117,140,224,	0,623,1008,6311,7211,8201,
#Deleted in new
chr1	111238926	111243432	chr1:111238926-111243432	0	+	111238926	111243222	789624	3	6,117,216,	0,2400,4290,
#Deleted in new
chr1	111239305	111243438	chr1:111239305-111243438	0	+	111239305	111239305	8553170	4	58,117,140,222,	0,2021,2921,3911,
#Partially deleted in new
chr1	111250253	111256715	chr1:111250253-111256715	7	+	111250253	111250253	16724991	8	47,166,125,77,188,99,129,164,	0,760,1506,2166,3064,4079,5062,6298,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	111280058	111286108	chr1:111280058-111286108	7	+	111280058	111280058	16724991	9	26,30,925,166,125,124,185,120,1128,	0,465,1492,2512,2922,3227,4006,4687,4922,
#Partially deleted in new
chr1	111280059	111284238	chr1:111280059-111284238	4	+	111280059	111280059	16724991	7	25,311,57,166,125,124,174,	0,1491,2359,2511,2921,3226,4005,
#Partially deleted in new
chr1	111280059	111286043	chr1:111280059-111286043	5	+	111280059	111280059	16724991	11	25,30,202,57,166,125,124,185,120,142,273,	0,464,1491,2359,2511,2921,3226,4005,4686,4921,5711,
#Deleted in new
chr1	111283348	111286116	chr1:111283348-111286116	5	+	111283348	111283348	16724991	4	61,120,142,346,	0,1397,1632,2422,
#Partially deleted in new
chr1	111310373	111320565	chr1:111310373-111320565	1	+	111310467	111320466	0	11	119,30,202,57,166,125,124,186,120,142,353,	0,1315,1816,4166,4896,7307,7612,8119,8746,8953,9839,
#Partially deleted in new
chr1	111310373	111320565	chr1:111310373-111320565	1	+	111317683	111320466	0	9	119,30,57,125,124,186,120,142,353,	0,1315,4166,7307,7612,8119,8746,8953,9839,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	111310444	111320557	chr1:111310444-111320557	0	+	111315279	111317691	789624	11	48,30,57,166,139,125,124,186,120,142,345,	0,1244,4095,4825,5289,7236,7541,8048,8675,8882,9768,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	111310460	111320562	chr1:111310460-111320562	0	+	111310460	111310460	8553170	8	32,30,3266,124,186,120,142,350,	0,1228,4079,7525,8032,8659,8866,9752,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	111310464	111320475	chr1:111310464-111320475	1	+	111317683	111320466	0	10	28,30,57,139,125,124,186,120,142,263,	0,1224,4075,5269,7216,7521,8028,8655,8862,9748,
#Partially deleted in new
chr1	111310467	111320380	chr1:111310467-111320380	0	+	111317683	111320380	789624	9	25,30,57,125,124,186,120,142,168,	0,1221,4072,7213,7518,8025,8652,8859,9745,
#Partially deleted in new
chr1	111310476	111320566	chr1:111310476-111320566	1	+	111315279	111320466	0	10	16,30,57,166,125,124,186,120,142,354,	0,1212,4063,4793,7204,7509,8016,8643,8850,9736,
#Partially deleted in new
chr1	111317599	111323981	chr1:111317599-111323981	3	-	111317599	111317599	8553170	2	328,148,	0,6234,
#Deleted in new
chr1	111323832	111324075	chr1:111323832-111324075	7	+	111323832	111323832	16724991	1	243,	0,
#Deleted in new
chr1	111346287	111353013	chr1:111346287-111353013	3	+	111346652	111351327	789624	6	384,140,99,131,118,1755,	0,622,1386,2228,3818,4971,
#Deleted in new
chr1	111346599	111353013	chr1:111346599-111353013	0	+	111346599	111346599	8553170	5	72,140,99,1708,1755,	0,310,1074,1916,4659,
#Deleted in new
chr1	111346619	111351563	chr1:111346619-111351563	1	+	111346652	111351327	789624	5	52,140,131,118,305,	0,290,1896,3486,4639,
#Deleted in new
chr1	111348340	111351513	chr1:111348340-111351513	0	+	111348340	111348340	8553170	3	306,118,255,	0,1765,2918,
#Partially deleted in new
chr1	111353274	111367409	chr1:111353274-111367409	7	-	111353274	111353274	16724991	9	105,145,94,79,127,125,153,56,249,	0,4199,5453,6328,7543,10233,11816,13467,13886,
#Deleted in new
chr1	111380290	111380571	chr1:111380290-111380571	7	+	111380290	111380290	16724991	1	281,	0,
#Partially deleted in new
chr1	111382859	111391819	chr1:111382859-111391819	7	-	111382859	111382859	16724991	9	306,99,147,122,200,119,118,157,90,	0,543,1589,3877,5394,6288,6902,8182,8870,
#Partially deleted in new
chr1	111384518	111389851	chr1:111384518-111389851	4	-	111384518	111384518	16724991	5	77,122,200,119,90,	0,2218,3735,4629,5243,
#Partially deleted in new
chr1	111414313	111427777	chr1:111414313-111427777	3	-	111414463	111427721	789624	11	1031,136,117,186,109,125,166,57,205,30,81,	0,2009,5296,6962,7251,8613,9229,11069,12123,12748,13383,
#Deleted in new
chr1	111415219	111416679	chr1:111415219-111416679	0	-	111415219	111415219	8553170	2	125,357,	0,1103,
#Deleted in new
chr1	111419609	111423051	chr1:111419609-111423051	0	-	111419609	111419609	8553170	3	117,398,125,	0,1666,3317,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	111431045	111433068	chr1:111431045-111433068	3	-	111431045	111431045	8553170	1	2023,	0,
#Deleted in new
chr1	111437513	111438037	chr1:111437513-111438037	7	+	111437513	111437513	16724991	1	524,	0,
#Partially deleted in new
chr1	111438637	111441364	chr1:111438637-111441364	0	-	111438637	111438637	8553170	2	188,227,	0,2500,
#Partially deleted in new
chr1	111438639	111441228	chr1:111438639-111441228	3	-	111438639	111438639	8553170	2	186,537,	0,2052,
#Partially deleted in new
chr1	111439889	111449376	chr1:111439889-111449376	3	-	111441229	111449169	0	10	1500,69,109,72,55,71,50,142,186,322,	0,2135,2763,3433,3977,4164,7205,7545,8729,9165,
#Partially deleted in new
chr1	111441227	111448729	chr1:111441227-111448729	0	-	111441229	111448729	789624	9	162,105,109,72,55,71,50,142,111,	0,797,1425,2095,2639,2826,5867,6207,7391,
#Partially deleted in new
chr1	111441297	111447532	chr1:111441297-111447532	0	-	111441297	111441297	8553170	9	92,106,69,109,72,55,71,50,98,	0,201,727,1355,2025,2569,2756,5797,6137,
#Partially deleted in new
chr1	111443348	111448891	chr1:111443348-111448891	0	-	111443348	111443348	8553170	6	46,55,71,50,142,273,	0,518,705,3746,4086,5270,
#Partially deleted in new
chr1	111448863	111456145	chr1:111448863-111456145	0	+	111448863	111448863	8553170	5	86,387,37,146,60,	0,331,973,5347,7222,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	111448935	111462773	chr1:111448935-111462773	3	+	111449541	111460994	789624	7	646,37,146,164,126,180,1857,	0,901,5275,7150,7694,10521,11981,
#Partially deleted in new
chr1	111449464	111461332	chr1:111449464-111461332	0	+	111449464	111449464	8553170	6	117,37,164,126,180,416,	0,372,6621,7165,9992,11452,
#Partially deleted in new
chr1	111449483	111461026	chr1:111449483-111461026	1	+	111449541	111460994	789624	5	98,164,126,180,110,	0,6602,7146,9973,11433,
#Partially deleted in new
chr1	111449484	111461312	chr1:111449484-111461312	0	+	111449484	111449484	8553170	6	97,37,23,126,180,396,	0,352,6742,7145,9972,11432,
#Partially deleted in new
chr1	111449681	111456748	chr1:111449681-111456748	0	+	111449681	111449681	8553170	4	192,146,164,119,	0,4529,6404,6948,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	111473791	111478512	chr1:111473791-111478512	3	+	111476028	111478123	789624	6	239,48,70,95,125,530,	0,2226,3006,3542,3859,4191,
#Deleted in new
chr1	111473868	111478472	chr1:111473868-111478472	1	+	111476028	111478123	789624	6	162,48,70,95,50,490,	0,2149,2929,3465,3857,4114,
#Deleted in new
chr1	111474567	111478511	chr1:111474567-111478511	0	+	111474567	111474567	8553170	3	1498,281,529,	0,2230,3415,
#Partially deleted in new
chr1	111483347	111503488	chr1:111483347-111503488	3	-	111483686	111503354	789624	6	410,101,67,348,107,484,	0,2392,3238,5329,7308,19657,
#Partially deleted in new
chr1	111483347	111563962	chr1:111483347-111563962	1	-	111483686	111563952	789624	6	410,101,67,348,107,117,	0,2392,3238,5329,7308,80498,
#Partially deleted in new
chr1	111483347	111489662	chr1:111483347-111489662	0	-	111483347	111483347	8553170	5	410,101,67,348,36,	0,2392,3238,5329,6279,
#Partially deleted in new
chr1	111483568	111563934	chr1:111483568-111563934	0	-	111483686	111563934	789624	5	189,101,67,191,89,	0,2171,3017,5108,80277,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	111485314	111488824	chr1:111485314-111488824	0	-	111485731	111488824	789624	3	526,67,148,	0,1271,3362,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	111486638	111489690	chr1:111486638-111489690	0	-	111486638	111486638	8553170	3	14,348,224,	0,2038,2828,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	111490316	111490423	chr1:111490316-111490423	3	-	111490316	111490316	8553170	1	107,	0,
#Deleted in new
chr1	111499428	111503760	chr1:111499428-111503760	3	-	111499949	111503354	0	2	1128,756,	0,3576,
#Deleted in new
chr1	111499827	111503412	chr1:111499827-111503412	1	-	111500598	111503354	789624	2	793,408,	0,3177,
#Deleted in new
chr1	111499930	111503633	chr1:111499930-111503633	0	-	111499930	111499930	8553170	2	626,135,	0,3568,
#Deleted in new
chr1	111500509	111503087	chr1:111500509-111503087	0	-	111500509	111500509	8553170	2	850,83,	0,2495,
#Partially deleted in new
chr1	111542217	111713113	chr1:111542217-111713113	3	+	111691360	111709235	0	8	292,84,69,57,141,144,116,683,	0,149116,153123,155223,161118,162125,166931,170213,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	111599654	111608318	chr1:111599654-111608318	3	-	111599654	111599654	5263520	5	441,64,132,74,183,	0,2537,4714,4974,8481,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	111604379	111608723	chr1:111604379-111608723	0	-	111604379	111604379	8553170	3	121,74,511,	0,249,3833,
#Partially deleted in new
chr1	111619776	111704405	chr1:111619776-111704405	0	+	111691360	111704405	789624	7	158,94,84,69,57,141,63,	0,7693,71557,75564,77664,83559,84566,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	111619782	111716691	chr1:111619782-111716691	1	+	111691360	111709235	0	8	152,84,69,57,141,144,116,4261,	0,71551,75558,77658,83553,84560,89366,92648,
#Partially deleted in new
chr1	111627468	111712696	chr1:111627468-111712696	0	+	111627468	111627468	8553170	9	91,84,69,57,141,144,115,116,266,	0,63865,67872,69972,75867,76874,79194,81680,84962,
#Deleted in new
chr1	111648290	111649544	chr1:111648290-111649544	7	-	111648290	111648290	16724991	1	1254,	0,
#Deleted in new
chr1	111650430	111650537	chr1:111650430-111650537	3	-	111650430	111650430	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	111722063	111739424	chr1:111722063-111739424	3	-	111726967	111739242	789624	2	5741,239,	0,17122,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	111722063	111755797	chr1:111722063-111755797	3	-	111726967	111755712	789624	2	5741,97,	0,33637,
#Partially deleted in new
chr1	111722350	111739363	chr1:111722350-111739363	1	-	111723101	111739242	789624	3	798,241,178,	0,5213,16835,
#Partially deleted in new
chr1	111726505	111755824	chr1:111726505-111755824	0	-	111726505	111726505	8553170	2	1299,124,	0,29195,
#Partially deleted in new
chr1	111727343	111739253	chr1:111727343-111739253	0	-	111727343	111739242	789624	2	488,68,	0,11842,
#Partially deleted in new
chr1	111739840	111747798	chr1:111739840-111747798	3	+	111739840	111739840	789624	3	237,155,1739,	0,4534,6219,
#Partially deleted in new
chr1	111739852	111746613	chr1:111739852-111746613	0	+	111739852	111739852	8553170	2	225,554,	0,6207,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	111745298	111755509	chr1:111745298-111755509	3	-	111745298	111745298	789624	3	2406,157,222,	0,7799,9989,
#Deleted in new
chr1	111746708	111747699	chr1:111746708-111747699	0	-	111746708	111746708	8553170	2	252,209,	0,782,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	111753774	111755537	chr1:111753774-111755537	0	-	111753774	111753774	8553170	1	1763,	0,
#Partially deleted in new
chr1	111755244	111765830	chr1:111755244-111765830	0	+	111755924	111760494	0	11	150,413,95,115,143,139,59,83,106,102,94,	0,568,1401,5229,5461,5742,5981,7010,7432,7661,10492,
#Partially deleted in new
chr1	111755304	111768016	chr1:111755304-111768016	3	+	111755924	111766899	0	11	921,95,169,115,143,139,59,83,106,102,2280,	0,1341,4095,5169,5401,5682,5921,6950,7372,7601,10432,
#Partially deleted in new
chr1	111760396	111767574	chr1:111760396-111767574	1	+	111762871	111766899	789624	3	192,2302,1838,	0,309,5340,
#Deleted in new
chr1	111761081	111762488	chr1:111761081-111762488	0	+	111761081	111761081	8553170	3	44,59,234,	0,144,1173,
#Partially deleted in new
chr1	111762416	111765830	chr1:111762416-111765830	0	+	111762416	111762416	8553170	3	366,102,94,	0,489,3320,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	111770661	111982796	chr1:111770661-111982796	1	-	111776076	111982726	0	6	5617,248,90,102,163,1176,	0,6364,9563,10028,16282,210959,
#Partially deleted in new
chr1	111775808	111989155	chr1:111775808-111989155	1	-	111776076	111982726	0	7	470,248,90,102,163,1178,408,	0,1217,4416,4881,11135,205812,212939,
#Partially deleted in new
chr1	111775808	111989155	chr1:111775808-111989155	3	-	111776076	111982726	0	8	470,248,57,90,102,163,1178,408,	0,1217,2627,4416,4881,11135,205812,212939,
#Deleted in new
chr1	111853761	111856905	chr1:111853761-111856905	3	-	111853761	111853761	789624	2	288,88,	0,3056,
#Deleted in new
chr1	111909335	111910161	chr1:111909335-111910161	0	+	111909335	111909335	8553170	3	194,237,39,	0,321,787,
#Deleted in new
chr1	111909647	111910931	chr1:111909647-111910931	3	+	111909647	111909647	789624	3	246,191,146,	0,475,1138,
#Deleted in new
chr1	111909684	111910930	chr1:111909684-111910930	1	+	111909684	111909684	8553170	4	32,52,154,145,	0,157,438,1101,
#Deleted in new
chr1	111989769	111991123	chr1:111989769-111991123	0	+	111989769	111989769	8553170	2	419,556,	0,798,
#Deleted in new
chr1	111990295	111991173	chr1:111990295-111991173	0	+	111990295	111990295	8553170	2	103,606,	0,272,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	111990535	111998842	chr1:111990535-111998842	3	+	111990535	111990535	789624	2	652,2416,	0,5891,
#Partially deleted in new
chr1	112177233	112360528	chr1:112177233-112360528	3	-	112177233	112177233	8553170	2	380,167,	0,183128,
#Deleted in new
chr1	112363280	112363581	chr1:112363280-112363581	7	+	112363280	112363280	16724991	1	301,	0,
#Deleted in new
chr1	112371003	112371107	chr1:112371003-112371107	3	+	112371003	112371003	8553170	1	104,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	112396180	112461164	chr1:112396180-112461164	3	+	112416165	112457412	789624	6	92,124,108,231,108,5234,	0,16013,19976,52761,58268,59750,
#Partially deleted in new
chr1	112396518	112456306	chr1:112396518-112456306	0	+	112416165	112456306	789624	6	67,124,108,231,108,376,	0,15675,19638,52423,57930,59412,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	112414716	112416287	chr1:112414716-112416287	0	+	112414716	112414716	8553170	2	191,455,	0,1116,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	112456817	112463456	chr1:112456817-112463456	0	+	112456817	112456817	8553170	2	557,902,	0,5737,
#Deleted in new
chr1	112461769	112461833	chr1:112461769-112461833	3	-	112461769	112461769	5263520	1	64,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	112466540	112521283	chr1:112466540-112521283	1	+	112514967	112520509	789624	5	1051,221,278,265,1004,	0,48333,49599,50580,53739,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	112467433	112530165	chr1:112467433-112530165	1	+	112467537	112520509	789624	6	158,71,221,278,265,9886,	0,23577,47440,48706,49687,52846,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	112508777	112522666	chr1:112508777-112522666	3	+	112509262	112520509	789624	5	667,221,278,265,2387,	0,6096,7362,8343,11502,
#Deleted in new
chr1	112514751	112516417	chr1:112514751-112516417	0	+	112514751	112514751	8553170	2	343,278,	0,1388,
#Deleted in new
chr1	112517798	112518441	chr1:112517798-112518441	3	-	112517798	112517798	8553170	1	643,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	112523517	112619418	chr1:112523517-112619418	3	-	112526012	112619113	789624	15	2594,140,93,151,103,73,115,98,155,79,116,55,163,83,510,	0,18433,27083,32350,53468,54827,58474,58857,60454,68007,74453,77276,87323,93295,95391,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	112523517	112619189	chr1:112523517-112619189	1	-	112526012	112619113	789624	14	2594,140,151,103,73,115,98,155,79,116,55,163,83,281,	0,18433,32350,53468,54827,58474,58857,60454,68007,74453,77276,87323,93295,95391,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	112523517	112619144	chr1:112523517-112619144	0	-	112540833	112619113	789624	16	2594,94,140,93,151,103,73,115,98,155,79,116,55,163,83,236,	0,17261,18433,27083,32350,53468,54827,58474,58857,60454,68007,74453,77276,87323,93295,95391,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	112523517	112619783	chr1:112523517-112619783	0	-	112540833	112619113	789624	17	2594,94,140,93,151,103,73,115,98,155,79,116,55,163,83,231,140,	0,17261,18433,27083,32350,53468,54827,58474,58857,60454,68007,74453,77276,87323,93295,95391,96126,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	112525281	112619113	chr1:112525281-112619113	0	-	112525281	112525281	8553170	10	830,140,93,103,73,79,116,55,163,205,	0,16669,25319,51704,53063,66243,72689,75512,85559,93627,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	112525529	112555876	chr1:112525529-112555876	0	-	112525529	112525529	8553170	2	582,9,	0,30338,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	112525875	112541975	chr1:112525875-112541975	0	-	112525875	112525875	8553170	4	236,117,94,25,	0,13283,14903,16075,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	112525878	112526952	chr1:112525878-112526952	0	-	112525878	112525878	8553170	2	233,67,	0,1007,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	112525882	112618928	chr1:112525882-112618928	1	-	112526012	112598043	789624	14	229,140,93,151,103,73,115,98,155,79,116,163,83,145,	0,16068,24718,29985,51103,52462,56109,56492,58089,65642,72088,84958,90930,92901,
#Partially deleted in new
chr1	112525985	112619189	chr1:112525985-112619189	1	-	112526012	112619113	789624	15	126,140,93,151,103,73,115,98,155,79,116,55,163,32,281,	0,15965,24615,29882,51000,52359,56006,56389,57986,65539,71985,74808,84855,90827,92923,
#Partially deleted in new
chr1	112541789	112619189	chr1:112541789-112619189	1	-	112541911	112619113	789624	14	301,93,151,103,73,115,98,155,79,116,55,163,83,281,	0,8811,14078,35196,36555,40202,40585,42182,49735,56181,59004,69051,75023,77119,
#Partially deleted in new
chr1	112541789	112619189	chr1:112541789-112619189	1	-	112541911	112619113	789624	14	301,93,151,103,73,115,98,155,79,116,55,163,32,281,	0,8811,14078,35196,36555,40202,40585,42182,49735,56181,59004,69051,75023,77119,
#Partially deleted in new
chr1	112541789	112619103	chr1:112541789-112619103	0	-	112541789	112541789	8553170	12	301,93,151,103,73,98,155,79,116,55,163,195,	0,8811,14078,35196,36555,40585,42182,49735,56181,59004,69051,77119,
#Partially deleted in new
chr1	112541793	112620825	chr1:112541793-112620825	0	-	112541793	112541793	8553170	15	297,93,151,77,103,73,115,98,155,79,116,55,163,83,916,	0,8807,14074,29481,35192,36551,40198,40581,42178,49731,56177,59000,69047,75019,78116,
#Partially deleted in new
chr1	112541950	112610906	chr1:112541950-112610906	0	-	112541950	112610906	789624	8	140,151,98,155,79,116,55,66,	0,13917,40424,42021,49574,56020,58843,68890,
#Partially deleted in new
chr1	112581995	112619117	chr1:112581995-112619117	0	-	112581995	112581995	8553170	7	111,98,79,116,163,83,209,	0,379,9529,15975,28845,34817,36913,
#Partially deleted in new
chr1	112583971	112618217	chr1:112583971-112618217	0	-	112583971	112618043	789624	7	155,79,116,55,163,83,211,	0,7553,13999,16822,26869,32841,34035,
#Partially deleted in new
chr1	112583974	112610962	chr1:112583974-112610962	0	-	112583974	112583974	8553170	3	152,55,122,	0,16819,26866,
#Partially deleted in new
chr1	112591481	112618941	chr1:112591481-112618941	0	-	112591481	112591481	8553170	6	122,116,55,163,83,33,	0,6489,9312,19359,25331,27427,
#Partially deleted in new
chr1	112598021	112619672	chr1:112598021-112619672	0	-	112598021	112598021	8553170	6	65,55,163,83,123,276,	0,2772,12819,18791,20225,21375,
#Partially deleted in new
chr1	112598021	112619664	chr1:112598021-112619664	0	-	112598021	112598021	8553170	5	65,55,163,83,468,	0,2772,12819,18791,21175,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	112607103	112619099	chr1:112607103-112619099	0	-	112607103	112607103	8553170	3	494,163,191,	0,3737,11805,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	112607240	112619126	chr1:112607240-112619126	0	-	112607240	112607240	8553170	4	357,163,83,218,	0,3600,9572,11668,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	112610454	112619111	chr1:112610454-112619111	0	-	112610454	112610454	8553170	2	549,203,	0,8454,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	112610454	112617286	chr1:112610454-112617286	0	-	112610454	112610454	8553170	2	549,474,	0,6358,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	112610454	112619111	chr1:112610454-112619111	0	-	112610454	112610454	8553170	4	236,163,83,203,	0,386,6358,8454,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	112610458	112619774	chr1:112610458-112619774	0	-	112610458	112610458	8553170	4	545,83,231,131,	0,6354,8450,9185,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	112610657	112619796	chr1:112610657-112619796	0	-	112610657	112610657	8553170	3	346,83,153,	0,6155,8986,
#Partially deleted in new
chr1	112619172	112671619	chr1:112619172-112671619	3	+	112619844	112670132	0	10	711,64,52,64,207,80,79,72,63,1628,	0,28037,30245,34425,35292,39849,40528,47901,50370,50819,
#Partially deleted in new
chr1	112619804	112650013	chr1:112619804-112650013	0	+	112619804	112619804	8553170	3	79,64,596,	0,27405,29613,
#Partially deleted in new
chr1	112619818	112670383	chr1:112619818-112670383	0	+	112619818	112619818	8553170	8	65,64,52,80,79,72,63,392,	0,27391,29599,39203,39882,47255,49724,50173,
#Partially deleted in new
chr1	112619831	112667085	chr1:112619831-112667085	0	+	112619831	112619831	8553170	9	52,40,64,52,64,207,80,79,12,	0,26923,27378,29586,33766,34633,39190,39869,47242,
#Deleted in new
chr1	112625905	112626224	chr1:112625905-112626224	7	-	112625905	112625905	16724991	1	319,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	112634718	112634784	chr1:112634718-112634784	3	-	112634718	112634718	8553170	1	66,	0,
#Partially deleted in new
chr1	112659328	112670170	chr1:112659328-112670170	0	+	112659328	112659328	8553170	4	451,72,63,179,	0,7745,10214,10663,
#Partially deleted in new
chr1	112666919	112669594	chr1:112666919-112669594	0	+	112666919	112666919	8553170	2	226,52,	0,2623,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	112673140	112674883	chr1:112673140-112674883	0	+	112673140	112673140	8553170	2	311,36,	0,1707,
#Partially deleted in new
chr1	112674420	112700746	chr1:112674420-112700746	3	+	112674912	112700507	789624	21	309,218,204,236,259,135,169,155,177,148,159,104,98,217,118,192,75,126,89,122,331,	0,411,14514,14994,15419,17244,18340,19597,20032,20328,20995,21727,22016,22209,23573,23866,24294,25264,25473,25798,25995,
#Partially deleted in new
chr1	112674486	112700739	chr1:112674486-112700739	1	+	112674912	112700507	789624	21	243,202,204,236,259,135,169,155,177,148,159,104,98,217,118,192,75,126,89,122,324,	0,361,14448,14928,15353,17178,18274,19531,19966,20262,20929,21661,21950,22143,23507,23800,24228,25198,25407,25732,25929,
#Partially deleted in new
chr1	112674697	112700734	chr1:112674697-112700734	1	+	112688965	112700507	789624	22	32,218,141,811,236,259,135,169,155,177,148,159,104,98,217,118,192,75,126,89,122,319,	0,134,12268,13630,14717,15142,16967,18063,19320,19755,20051,20718,21450,21739,21932,23296,23589,24017,24987,25196,25521,25718,
#Partially deleted in new
chr1	112674705	112700734	chr1:112674705-112700734	0	+	112674705	112674705	8553170	21	24,202,141,811,236,259,135,169,155,177,148,159,104,98,217,118,503,126,89,122,319,	0,142,12260,13622,14709,15134,16959,18055,19312,19747,20043,20710,21442,21731,21924,23288,23581,24979,25188,25513,25710,
#Partially deleted in new
chr1	112674719	112700726	chr1:112674719-112700726	0	+	112674719	112674719	8553170	18	10,218,204,236,259,135,169,155,177,148,159,104,98,217,118,1524,447,311,	0,112,14215,14695,15120,16945,18041,19298,19733,20029,20696,21428,21717,21910,23274,23567,25174,25696,
#Partially deleted in new
chr1	112674736	112688483	chr1:112674736-112688483	0	+	112674736	112674736	8553170	3	313,141,156,	0,12229,13591,
#Partially deleted in new
chr1	112674744	112700710	chr1:112674744-112700710	1	+	112674912	112700507	789624	20	305,204,236,259,135,169,155,177,148,159,104,98,217,118,192,75,126,89,122,295,	0,14190,14670,15095,16920,18016,19273,19708,20004,20671,21403,21692,21885,23249,23542,23970,24940,25149,25474,25671,
#Partially deleted in new
chr1	112693687	112696621	chr1:112693687-112696621	3	-	112693687	112693687	8553170	3	163,264,22,	0,813,2912,
#Partially deleted in new
chr1	112693904	112694584	chr1:112693904-112694584	0	+	112693904	112693904	8553170	2	268,132,	0,548,
#Partially deleted in new
chr1	112696738	112699192	chr1:112696738-112699192	0	+	112696738	112696738	8553170	4	108,118,192,478,	0,1255,1548,1976,
#Partially deleted in new
chr1	112696818	112698679	chr1:112696818-112698679	0	+	112696818	112696818	8553170	4	28,118,192,42,	0,1175,1468,1819,
#Deleted in new
chr1	112697859	112699761	chr1:112697859-112699761	0	+	112697859	112697859	8553170	5	31,118,192,75,77,	0,134,427,855,1825,
#Deleted in new
chr1	112698307	112698975	chr1:112698307-112698975	0	+	112698307	112698307	8553170	2	60,319,	0,349,
#Deleted in new
chr1	112698307	112700739	chr1:112698307-112700739	0	+	112698307	112698307	8553170	5	171,75,353,447,324,	0,407,1150,1586,2108,
#Deleted in new
chr1	112699623	112700722	chr1:112699623-112700722	0	+	112699623	112699623	8553170	4	187,89,122,307,	0,270,595,792,
#Deleted in new
chr1	112699686	112700725	chr1:112699686-112700725	0	+	112699686	112699686	8553170	3	124,89,507,	0,207,532,
#Deleted in new
chr1	112701105	112707403	chr1:112701105-112707403	1	-	112701539	112703799	0	6	608,131,121,163,69,326,	0,1457,1893,2538,3994,5972,
#Deleted in new
chr1	112701126	112707056	chr1:112701126-112707056	1	-	112701539	112703799	0	6	587,131,121,163,69,224,	0,1436,1872,2517,3973,5706,
#Deleted in new
chr1	112701130	112707434	chr1:112701130-112707434	3	-	112701539	112703799	0	5	583,131,121,163,357,	0,1432,1868,2513,5947,
#Deleted in new
chr1	112701132	112707127	chr1:112701132-112707127	1	-	112701539	112703799	0	6	581,131,121,163,1153,50,	0,1430,1866,2511,3967,5945,
#Deleted in new
chr1	112701209	112707102	chr1:112701209-112707102	0	-	112703412	112703799	789624	7	504,131,121,74,163,24,25,	0,1353,1789,2174,2434,3890,5868,
#Deleted in new
chr1	112701274	112707135	chr1:112701274-112707135	1	-	112701539	112703799	0	6	439,131,121,163,116,58,	0,1288,1724,2369,3778,5803,
#Deleted in new
chr1	112701312	112707125	chr1:112701312-112707125	1	-	112701539	112703799	0	6	401,131,121,163,24,48,	0,1250,1686,2331,3787,5765,
#Deleted in new
chr1	112701324	112707120	chr1:112701324-112707120	1	-	112701460	112703799	789624	5	371,88,121,163,43,	0,1281,1674,2319,5753,
#Deleted in new
chr1	112701337	112703653	chr1:112701337-112703653	0	-	112701337	112701337	8553170	3	376,557,10,	0,1225,2306,
#Deleted in new
chr1	112701436	112707133	chr1:112701436-112707133	0	-	112703412	112703799	789624	7	277,131,121,74,163,69,56,	0,1126,1562,1947,2207,3663,5641,
#Deleted in new
chr1	112701519	112707079	chr1:112701519-112707079	1	-	112701539	112703799	0	6	194,131,121,163,69,348,	0,1043,1479,2124,3580,5212,
#Deleted in new
chr1	112701555	112707056	chr1:112701555-112707056	0	-	112701555	112703799	789624	6	158,131,121,163,69,224,	0,1007,1443,2088,3544,5277,
#Deleted in new
chr1	112701613	112704997	chr1:112701613-112704997	0	-	112701613	112703799	789624	5	100,131,121,163,59,	0,949,1385,2030,3325,
#Deleted in new
chr1	112702587	112707102	chr1:112702587-112707102	0	-	112702587	112703799	789624	5	106,121,163,102,25,	0,411,1056,2512,4490,
#Partially deleted in new
chr1	112702613	112711433	chr1:112702613-112711433	0	-	112702613	112702613	8553170	6	80,121,163,152,108,168,	0,385,1030,7846,8130,8652,
#Partially deleted in new
chr1	112702647	112711355	chr1:112702647-112711355	0	-	112702647	112711355	789624	7	46,121,163,152,108,64,90,	0,351,996,7812,8096,8360,8618,
#Partially deleted in new
chr1	112702647	112711355	chr1:112702647-112711355	3	-	112702647	112711355	789624	8	46,121,163,69,152,108,64,90,	0,351,996,2452,7812,8096,8360,8618,
#Partially deleted in new
chr1	112702647	112711355	chr1:112702647-112711355	0	-	112710841	112711355	789624	6	46,121,163,152,108,90,	0,351,996,7812,8096,8618,
#Partially deleted in new
chr1	112702647	112711224	chr1:112702647-112711224	0	-	112702647	112702647	8553170	6	46,121,163,152,108,217,	0,351,996,7812,8096,8360,
#Deleted in new
chr1	112702670	112707159	chr1:112702670-112707159	0	-	112703412	112703799	789624	5	23,121,74,163,82,	0,328,713,973,4407,
#Deleted in new
chr1	112702998	112707116	chr1:112702998-112707116	0	-	112702998	112705639	789624	5	121,163,69,129,39,	0,645,2101,2606,4079,
#Deleted in new
chr1	112703000	112704921	chr1:112703000-112704921	0	-	112703000	112703799	789624	4	119,163,159,29,	0,643,1281,1892,
#Deleted in new
chr1	112703492	112707114	chr1:112703492-112707114	0	-	112703492	112703492	8553170	3	314,69,37,	0,1607,3585,
#Deleted in new
chr1	112704639	112707127	chr1:112704639-112707127	0	-	112704639	112704639	8553170	2	529,50,	0,2438,
#Partially deleted in new
chr1	112709993	112715477	chr1:112709993-112715477	3	-	112710162	112715301	789624	10	317,152,108,64,119,85,113,288,115,502,	0,466,750,1014,1272,1977,2351,2750,3503,4982,
#Partially deleted in new
chr1	112709993	112715255	chr1:112709993-112715255	0	-	112711462	112715255	789624	10	79,152,108,64,209,85,116,288,115,280,	0,466,750,1014,1272,1977,2351,2750,3503,4982,
#Partially deleted in new
chr1	112709997	112715291	chr1:112709997-112715291	1	-	112710162	112712971	789624	11	313,152,108,64,119,85,113,60,111,115,1234,	0,462,746,1010,1268,1973,2347,2746,2923,3499,4060,
#Deleted in new
chr1	112711992	112715303	chr1:112711992-112715303	0	-	112713578	112715301	789624	6	63,113,288,115,94,328,	0,352,751,1504,2641,2983,
#Deleted in new
chr1	112714233	112715328	chr1:112714233-112715328	0	-	112714233	112714233	8553170	2	494,353,	0,742,
#Deleted in new
chr1	112715671	112717796	chr1:112715671-112717796	3	+	112715671	112715671	8553170	1	2125,	0,
#Partially deleted in new
chr1	112720418	112727235	chr1:112720418-112727235	1	+	112722233	112726680	789624	5	216,116,150,193,607,	0,1814,2597,3526,6210,
#Partially deleted in new
chr1	112720576	112727235	chr1:112720576-112727235	3	+	112722233	112726640	789624	5	58,116,150,125,607,	0,1656,2439,3436,6052,
#Partially deleted in new
chr1	112748094	112748475	chr1:112748094-112748475	7	+	112748094	112748094	16724991	1	381,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	112820169	112849815	chr1:112820169-112849815	0	-	112820169	112820169	8553170	4	369,102,160,136,	0,3483,5343,29510,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	112820173	112850643	chr1:112820173-112850643	3	-	112820173	112820173	789624	7	368,102,160,35,93,97,964,	0,3479,5339,8303,20314,28780,29506,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	112850027	112877871	chr1:112850027-112877871	3	+	112850027	112850027	8553170	3	400,45,142,	0,26912,27702,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	112850075	112877867	chr1:112850075-112877867	0	+	112850075	112850075	8553170	2	352,138,	0,27654,
#Partially deleted in new
chr1	112890766	112890922	chr1:112890766-112890922	7	-	112890766	112890766	16724991	1	156,	0,
#Partially deleted in new
chr1	112911846	112956353	chr1:112911846-112956353	3	-	112913890	112929308	789624	5	2319,867,144,261,319,	0,5331,10143,17245,44188,
#Partially deleted in new
chr1	112911851	112956063	chr1:112911851-112956063	1	-	112913890	112929308	789624	5	2314,867,144,261,788,	0,5326,10138,17240,43424,
#Partially deleted in new
chr1	112914024	112956063	chr1:112914024-112956063	0	-	112914024	112929308	789624	5	141,867,144,261,788,	0,3153,7965,15067,41251,
#Partially deleted in new
chr1	112917515	112935988	chr1:112917515-112935988	0	-	112917515	112929308	789624	4	529,144,261,165,	0,4474,11576,18308,
#Partially deleted in new
chr1	112917759	112957013	chr1:112917759-112957013	0	-	112917759	112929308	789624	4	285,144,261,175,	0,4230,11332,39079,
#Partially deleted in new
chr1	112918017	112922392	chr1:112918017-112922392	0	-	112918017	112918017	8553170	2	27,403,	0,3972,
#Deleted in new
chr1	112923422	112924337	chr1:112923422-112924337	7	+	112923422	112923422	16724991	1	915,	0,
#Partially deleted in new
chr1	112929047	112956181	chr1:112929047-112956181	0	-	112929047	112929047	8553170	2	305,147,	0,26987,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	112956414	112964072	chr1:112956414-112964072	0	+	112956414	112956414	789624	3	542,99,101,	0,4062,7557,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	112956428	112999496	chr1:112956428-112999496	0	+	112956428	112956428	8553170	3	528,99,567,	0,4048,42501,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	112956460	112975430	chr1:112956460-112975430	1	+	112956460	112956460	8553170	3	1262,99,7396,	0,4016,11574,
#Partially deleted in new
chr1	112956519	112968398	chr1:112956519-112968398	0	+	112956519	112956519	8553170	3	437,99,364,	0,3957,11515,
#Partially deleted in new
chr1	112956823	113047051	chr1:112956823-113047051	3	+	112956823	112956823	8553170	6	133,99,180,231,164,266,	0,3653,42106,51306,76851,89962,
#Partially deleted in new
chr1	113008253	113047055	chr1:113008253-113047055	0	+	113008253	113008253	8553170	2	107,270,	0,38532,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	113011686	113073105	chr1:113011686-113073105	3	-	113011686	113011686	789624	3	2153,139,167,	0,36736,61252,
#Partially deleted in new
chr1	113033672	113047055	chr1:113033672-113047055	0	+	113033672	113033672	8553170	2	166,270,	0,13113,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	113073208	113132260	chr1:113073208-113132260	3	+	113073406	113124101	789624	18	437,66,75,135,144,144,144,144,81,72,69,164,321,282,450,150,291,8386,	0,18109,19997,20221,21130,21403,22665,23013,25496,27002,27211,34385,37033,39270,41218,43078,46024,50666,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	113098722	113107826	chr1:113098722-113107826	0	+	113098722	113098722	8553170	5	63,72,69,127,233,	0,1488,1697,4886,8871,
#Deleted in new
chr1	113100210	113100712	chr1:113100210-113100712	0	+	113100210	113100210	8553170	2	72,293,	0,209,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	113100396	113127200	chr1:113100396-113127200	0	+	113100396	113100396	8553170	8	92,164,321,282,450,150,291,3326,	0,7197,9845,12082,14030,15890,18836,23478,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	113103200	113124997	chr1:113103200-113124997	0	+	113103200	113103200	8553170	8	585,164,321,282,450,150,291,1123,	0,4393,7041,9278,11226,13086,16032,20674,
#Deleted in new
chr1	113125320	113126883	chr1:113125320-113126883	7	-	113125320	113125320	16724991	1	1563,	0,
#Deleted in new
chr1	113168993	113169403	chr1:113168993-113169403	7	+	113168993	113168993	16724991	1	410,	0,
#Deleted in new
chr1	113198824	113199258	chr1:113198824-113199258	7	+	113198824	113198824	16724991	1	434,	0,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr1	113390748	113682434	chr1:113390748-113682434	1	+	113391033	113682261	0	22	601,117,120,210,175,80,58,75,95,189,606,32,157,92,193,189,186,103,127,144,139,223,	0,158766,189793,194638,199735,203732,223852,227783,228987,232057,251162,252994,255737,258488,260265,263081,268331,280985,281866,282573,290449,291463,
#Partially deleted in new
chr1	113390958	113685923	chr1:113390958-113685923	1	+	113391033	113684014	0	21	391,117,120,210,175,80,58,95,189,606,32,157,92,193,189,186,103,127,144,139,3027,	0,158556,189583,194428,199525,203522,223642,228777,231847,250952,252784,255527,258278,260055,262871,268121,280775,281656,282363,290239,291938,
#Partially deleted in new
chr1	113390971	113685923	chr1:113390971-113685923	3	+	113391033	113682261	0	22	378,117,120,210,175,80,58,95,189,606,32,157,92,193,189,186,103,127,144,139,91,3027,	0,158543,189570,194415,199512,203509,223629,228764,231834,250939,252771,255514,258265,260042,262858,268108,280762,281643,282350,290226,291240,291925,
#Partially deleted in new
chr1	113390988	113682434	chr1:113390988-113682434	1	+	113391033	113682261	0	21	361,117,120,210,175,80,58,95,189,606,32,157,92,193,189,186,103,127,144,139,223,	0,158526,189553,194398,199495,203492,223612,228747,231817,250922,252754,255497,258248,260025,262841,268091,280745,281626,282333,290209,291223,
#Partially deleted in new
chr1	113391130	113581102	chr1:113391130-113581102	0	+	113391130	113391130	8553170	3	219,117,561,	0,158384,189411,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	113391260	113404455	chr1:113391260-113404455	0	+	113391260	113391260	8553170	2	89,801,	0,12394,
#Deleted in new
chr1	113449699	113450728	chr1:113449699-113450728	7	+	113449699	113449699	16724991	1	1029,	0,
#Partially deleted in new
chr1	113576756	113576899	chr1:113576756-113576899	7	-	113576756	113576756	16724991	1	143,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	113696830	113715212	chr1:113696830-113715212	0	-	113696830	113696830	8553170	12	895,126,96,156,87,132,273,129,222,90,174,1934,	0,1431,2873,3963,7250,7835,9059,9763,13423,14915,15109,16448,
#Partially deleted in new
chr1	113697201	113759155	chr1:113697201-113759155	1	-	113697704	113758703	789624	18	524,126,96,156,87,132,273,129,222,90,174,160,135,157,159,70,57,497,	0,1060,2502,3592,6879,7464,8688,9392,13052,14544,14738,16077,27557,29216,40908,41528,60497,61457,
#Partially deleted in new
chr1	113697204	113759338	chr1:113697204-113759338	1	-	113697704	113758703	789624	18	521,126,96,156,87,132,273,129,222,90,174,160,157,159,70,57,75,316,	0,1057,2499,3589,6876,7461,8685,9389,13049,14541,14735,16074,29213,40905,41525,60494,61454,61818,
#Partially deleted in new
chr1	113697204	113759437	chr1:113697204-113759437	1	-	113697704	113758703	789624	18	521,126,96,156,87,132,273,129,222,90,174,160,135,157,70,57,75,415,	0,1057,2499,3589,6876,7461,8685,9389,13049,14541,14735,16074,27554,29213,41525,60494,61454,61818,
#Partially deleted in new
chr1	113697204	113759476	chr1:113697204-113759476	3	-	113697704	113758703	789624	19	521,126,96,156,87,132,273,129,222,90,174,160,135,157,159,70,57,75,454,	0,1057,2499,3589,6876,7461,8685,9389,13049,14541,14735,16074,27554,29213,40905,41525,60494,61454,61818,
#Deleted in new
chr1	113698883	113699631	chr1:113698883-113699631	7	-	113698883	113698883	16724991	1	748,	0,
#Partially deleted in new
chr1	113699874	113705981	chr1:113699874-113705981	0	-	113699874	113699874	8553170	5	369,156,87,132,92,	0,919,4206,4791,6015,
#Partially deleted in new
chr1	113703822	113759476	chr1:113703822-113759476	1	-	113704056	113758703	789624	15	345,132,273,129,222,90,174,160,135,157,159,70,57,190,454,	0,843,2067,2771,6431,7923,8117,9456,20936,22595,34287,34907,53876,54836,55200,
#Partially deleted in new
chr1	113705764	113713328	chr1:113705764-113713328	0	-	113705832	113713328	789624	6	398,129,222,90,174,50,	0,829,4489,5981,6175,7514,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	113725334	113738268	chr1:113725334-113738268	0	-	113725334	113725334	8553170	3	627,157,159,	0,1083,12775,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	113725668	113738786	chr1:113725668-113738786	0	-	113725668	113725668	8553170	4	293,41,159,57,	0,749,12441,13061,
#Partially deleted in new
chr1	113738125	113759158	chr1:113738125-113759158	0	-	113738125	113758703	789624	4	143,70,57,500,	0,604,19573,20533,
#Partially deleted in new
chr1	113749521	113759489	chr1:113749521-113759489	0	-	113749521	113749521	8553170	3	68,57,831,	0,8177,9137,
#Partially deleted in new
chr1	113761831	113812476	chr1:113761831-113812476	3	-	113765979	113812412	789624	7	4622,109,168,143,138,674,767,	0,5267,6390,15378,15839,35531,49878,
#Partially deleted in new
chr1	113761832	113812448	chr1:113761832-113812448	1	-	113765979	113812412	789624	7	4621,109,168,143,138,674,739,	0,5266,6389,15377,15838,35530,49877,
#Partially deleted in new
chr1	113764615	113812293	chr1:113764615-113812293	0	-	113796300	113812268	789624	8	1838,109,168,143,138,118,674,584,	0,2483,3606,12594,13055,31570,32747,47094,
#Partially deleted in new
chr1	113765341	113812275	chr1:113765341-113812275	1	-	113765979	113812268	789624	8	1112,109,168,143,138,674,331,28,	0,1757,2880,11868,12329,32021,46368,46906,
#Partially deleted in new
chr1	113765847	113812289	chr1:113765847-113812289	1	-	113765979	113812268	789624	7	606,109,168,143,138,674,580,	0,1251,2374,11362,11823,31515,45862,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	113766144	113768034	chr1:113766144-113768034	0	-	113766144	113766144	8553170	3	309,109,80,	0,954,1810,
#Partially deleted in new
chr1	113812378	113823496	chr1:113812378-113823496	3	+	113812378	113812378	8553170	4	234,105,95,339,	0,2008,2999,10779,
#Partially deleted in new
chr1	113812607	113815476	chr1:113812607-113815476	1	+	113812607	113812607	8553170	3	218,105,99,	0,1779,2770,
#Partially deleted in new
chr1	113813810	113871759	chr1:113813810-113871759	3	-	113814904	113871623	789624	21	1159,78,31,116,81,28,131,84,818,77,87,78,67,143,60,72,39,96,77,109,223,	0,5766,11331,15781,16138,19300,20498,21099,23779,24733,34729,38216,40660,41096,42571,42737,43927,44667,45191,45541,57726,
#Partially deleted in new
chr1	113813810	113871712	chr1:113813810-113871712	1	-	113819582	113871623	789624	8	1159,78,60,39,96,77,109,176,	0,5766,42571,43927,44667,45191,45541,57726,
#Partially deleted in new
chr1	113813811	113871753	chr1:113813811-113871753	1	-	113814904	113871623	789624	20	1158,78,31,116,81,28,131,84,818,77,87,78,67,143,60,39,96,77,109,217,	0,5765,11330,15780,16137,19299,20497,21098,23778,24732,34728,38215,40659,41095,42570,43926,44666,45190,45540,57725,
#Partially deleted in new
chr1	113813814	113871698	chr1:113813814-113871698	1	-	113814904	113871623	789624	19	1155,78,31,116,81,28,131,84,818,77,67,143,60,72,39,96,77,109,162,	0,5762,11327,15777,16134,19296,20494,21095,23775,24729,40656,41092,42567,42733,43923,44663,45187,45537,57722,
#Partially deleted in new
chr1	113814663	113819832	chr1:113814663-113819832	0	-	113814663	113814663	8553170	2	306,256,	0,4913,
#Partially deleted in new
chr1	113814678	113871708	chr1:113814678-113871708	0	-	113854498	113871623	789624	17	291,78,31,116,81,28,131,84,818,77,87,78,67,96,77,109,172,	0,4898,10463,14913,15270,18432,19630,20231,22911,23865,33861,37348,39792,43799,44323,44673,56858,
#Partially deleted in new
chr1	113819298	113871712	chr1:113819298-113871712	1	-	113819547	113871623	789624	20	356,31,116,81,28,131,84,818,77,87,78,67,143,60,72,39,96,77,109,176,	0,5843,10293,10650,13812,15010,15611,18291,19245,29241,32728,35172,35608,37083,37249,38439,39179,39703,40053,52238,
#Partially deleted in new
chr1	113819525	113871712	chr1:113819525-113871712	1	-	113819547	113871623	789624	15	129,31,116,81,28,131,84,818,77,87,78,96,77,109,176,	0,5616,10066,10423,13585,14783,15384,18064,19018,29014,32501,38952,39476,39826,52011,
#Partially deleted in new
chr1	113823412	113829171	chr1:113823412-113829171	0	+	113823412	113823412	8553170	2	88,86,	0,5673,
#Partially deleted in new
chr1	113832946	113871664	chr1:113832946-113871664	0	-	113832946	113832946	8553170	16	192,131,84,818,77,87,78,67,143,60,72,39,96,77,109,128,	0,1362,1963,4643,5597,15593,19080,21524,21960,23435,23601,24791,25531,26055,26405,38590,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	113856634	113901237	chr1:113856634-113901237	3	+	113856634	113856634	789624	5	90,122,34,122,1366,	0,901,1348,41233,43237,
#Partially deleted in new
chr1	113856782	113871736	chr1:113856782-113871736	0	-	113856782	113856782	8553170	6	44,39,96,77,109,200,	0,955,1695,2219,2569,14754,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	113859062	113871753	chr1:113859062-113871753	0	-	113859453	113871623	789624	4	16,109,185,217,	0,289,5135,12474,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	113878167	113887459	chr1:113878167-113887459	0	-	113878167	113878167	8553170	2	3830,211,	0,9081,
#Duplicated in new
chr1	113878988	113885455	chr1:113878988-113885455	0	-	113878988	113878988	8553170	2	2152,3683,	0,2784,
#Partially deleted in new
chr1	113880702	113887547	chr1:113880702-113887547	3	-	113881122	113887375	789624	4	438,225,122,299,	0,1070,5834,6546,
#Partially deleted in new
chr1	113881014	113887305	chr1:113881014-113887305	0	-	113881014	113881014	8553170	3	126,225,57,	0,758,6234,
#Partially deleted in new
chr1	113881053	113887437	chr1:113881053-113887437	1	-	113881096	113887375	789624	2	87,189,	0,6195,
#Partially deleted in new
chr1	113881122	113887375	chr1:113881122-113887375	1	-	113881122	113887375	789624	3	18,122,127,	0,5414,6126,
#Partially deleted in new
chr1	113881763	113887375	chr1:113881763-113887375	0	-	113881763	113881763	8553170	3	234,122,127,	0,4773,5485,
#Partially deleted in new
chr1	113894747	113905070	chr1:113894747-113905070	3	-	113895064	113904717	0	11	745,282,208,104,84,497,148,131,225,189,129,	0,1009,1510,3092,3970,5156,6488,7007,7890,9857,10194,
#Partially deleted in new
chr1	113894747	113904828	chr1:113894747-113904828	1	-	113895064	113904717	789624	7	745,282,208,104,84,497,224,	0,1009,1510,3092,3970,5156,9857,
#Partially deleted in new
chr1	113894747	113904998	chr1:113894747-113904998	1	-	113895064	113904717	0	10	745,282,208,104,84,497,148,131,225,394,	0,1009,1510,3092,3970,5156,6488,7007,7890,9857,
#Partially deleted in new
chr1	113895055	113900245	chr1:113895055-113900245	0	-	113895055	113895055	8553170	4	1410,104,84,342,	0,2784,3662,4848,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	113895059	113897939	chr1:113895059-113897939	0	-	113895059	113895059	8553170	2	979,1682,	0,1198,
#Partially deleted in new
chr1	113896044	113897975	chr1:113896044-113897975	0	-	113896044	113896044	8553170	2	421,136,	0,1795,
#Partially deleted in new
chr1	113896348	113905056	chr1:113896348-113905056	0	-	113896348	113896348	8553170	8	117,104,46,131,148,131,189,115,	0,1491,2369,3921,4887,5406,8256,8593,
#Deleted in new
chr1	113899127	113900008	chr1:113899127-113900008	0	-	113899127	113899127	8553170	2	225,105,	0,776,
#Partially deleted in new
chr1	113899903	113905201	chr1:113899903-113905201	0	-	113899903	113904717	789624	5	497,148,131,189,260,	0,1332,1851,4701,5038,
#Partially deleted in new
chr1	113899941	113904833	chr1:113899941-113904833	0	-	113899941	113899941	8553170	4	459,131,225,229,	0,1813,2696,4663,
#Partially deleted in new
chr1	113899987	113905020	chr1:113899987-113905020	0	-	113899987	113904717	789624	3	413,189,79,	0,4617,4954,
#Partially deleted in new
chr1	113900061	113904844	chr1:113900061-113904844	0	-	113900061	113900061	8553170	5	339,148,131,97,240,	0,1174,1693,2576,4543,
#Partially deleted in new
chr1	113900230	113905037	chr1:113900230-113905037	0	-	113900230	113904717	789624	6	170,148,131,225,189,117,	0,1005,1524,2407,4374,4690,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	113900330	113902119	chr1:113900330-113902119	0	-	113900330	113900330	8553170	3	70,148,365,	0,905,1424,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	113905140	113914086	chr1:113905140-113914086	3	+	113905586	113912191	0	4	635,166,183,2956,	0,1855,2868,5990,
#Partially deleted in new
chr1	113905212	113912381	chr1:113905212-113912381	1	+	113905586	113912191	8553170	3	563,166,1251,	0,1783,5918,
#Partially deleted in new
chr1	113905332	113912464	chr1:113905332-113912464	0	+	113905586	113908038	8553170	3	443,183,1334,	0,2676,5798,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	113905346	113914086	chr1:113905346-113914086	1	+	113905586	113912191	789624	4	429,166,183,2956,	0,1649,2662,5784,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	113905408	113914072	chr1:113905408-113914072	0	+	113905586	113908038	789624	4	367,183,708,1941,	0,2600,5722,6723,
#Partially deleted in new
chr1	113923999	113929318	chr1:113923999-113929318	3	-	113923999	113923999	8553170	3	333,145,93,	0,4244,5226,
#Partially deleted in new
chr1	113924000	113929232	chr1:113924000-113929232	0	-	113924000	113924000	8553170	2	332,989,	0,4243,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	113924000	113929258	chr1:113924000-113929258	1	-	113924000	113924000	789624	5	332,114,970,145,556,	0,2627,2852,4243,4702,
#Deleted in new
chr1	113927634	113929492	chr1:113927634-113929492	0	-	113927634	113927634	8553170	2	754,284,	0,1574,
#Partially deleted in new
chr1	113929191	113973648	chr1:113929191-113973648	1	+	113940383	113973512	789624	16	341,1078,124,120,87,185,163,226,122,135,143,183,207,242,131,625,	0,11190,23574,25459,26371,27435,27932,28874,33125,34195,36938,38574,39250,40764,42632,43832,
#Partially deleted in new
chr1	113929373	113972073	chr1:113929373-113972073	1	+	113940383	113972038	789624	15	159,1078,124,120,87,185,163,226,122,135,143,183,207,242,250,	0,11008,23392,25277,26189,27253,27750,28692,32943,34013,36756,38392,39068,40582,42450,
#Partially deleted in new
chr1	113929373	113977869	chr1:113929373-113977869	1	+	113940383	113973512	789624	15	159,1078,124,120,87,185,163,226,122,143,183,207,242,131,4846,	0,11008,23392,25277,26189,27253,27750,28692,32943,36756,38392,39068,40582,42450,43650,
#Partially deleted in new
chr1	113929709	113977804	chr1:113929709-113977804	3	+	113940383	113973512	789624	16	230,1078,124,120,87,185,163,226,122,135,143,183,207,242,131,4781,	0,10672,23056,24941,25853,26917,27414,28356,32607,33677,36420,38056,38732,40246,42114,43314,
#Partially deleted in new
chr1	113929754	113973571	chr1:113929754-113973571	1	+	113940383	113973512	789624	16	185,1078,124,120,87,185,61,226,122,135,143,183,207,242,131,548,	0,10627,23011,24896,25808,26872,27369,28311,32562,33632,36375,38011,38687,40201,42069,43269,
#Partially deleted in new
chr1	113929858	113973897	chr1:113929858-113973897	1	+	113940383	113973512	789624	15	81,1078,124,120,87,185,163,226,122,143,183,207,242,131,874,	0,10523,22907,24792,25704,26768,27265,28207,32458,36271,37907,38583,40097,41965,43165,
#Partially deleted in new
chr1	113930504	113940740	chr1:113930504-113940740	0	+	113940383	113940740	789624	3	120,95,359,	0,2635,9877,
#Partially deleted in new
chr1	113930727	113940702	chr1:113930727-113940702	0	+	113940383	113940702	789624	4	132,22,95,321,	0,1473,2412,9654,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	113951144	113977804	chr1:113951144-113977804	1	+	113952811	113973512	789624	15	148,124,120,87,185,163,226,122,135,143,183,207,242,131,4781,	0,1621,3506,4418,5482,5979,6921,11172,12242,14985,16621,17297,18811,20679,21879,
#Partially deleted in new
chr1	113953876	113973881	chr1:113953876-113973881	1	+	113954632	113973512	789624	14	56,145,87,185,163,226,122,135,143,183,207,242,131,858,	0,749,1686,2750,3247,4189,8440,9510,12253,13889,14565,16079,17947,19147,
#Partially deleted in new
chr1	113963439	113977804	chr1:113963439-113977804	0	+	113963439	113973512	789624	7	82,140,183,207,242,131,4781,	0,2693,4326,5002,6516,8384,9584,
#Deleted in new
chr1	113979390	113982254	chr1:113979390-113982254	1	+	113980400	113981769	789624	3	240,415,1306,	0,812,1558,
#Deleted in new
chr1	113979440	113982254	chr1:113979440-113982254	1	+	113980072	113981769	789624	4	190,152,286,1306,	0,534,891,1508,
#Deleted in new
chr1	113979442	113982254	chr1:113979442-113982254	3	+	113979516	113981769	789624	3	188,286,1306,	0,889,1506,
#Deleted in new
chr1	113979490	113982254	chr1:113979490-113982254	0	+	113979490	113979490	8553170	2	140,1923,	0,841,
#Partially deleted in new
chr1	113980499	114035572	chr1:113980499-114035572	0	+	113980499	113980499	8553170	2	118,377,	0,54696,
#Partially deleted in new
chr1	114001432	114002235	chr1:114001432-114002235	7	-	114001432	114001432	16724991	2	444,121,	0,682,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	114032392	114034511	chr1:114032392-114034511	3	+	114032392	114032392	8553170	1	2119,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	114089290	114153868	chr1:114089290-114153868	0	-	114139827	114153772	789624	7	2792,151,172,121,559,266,259,	0,8436,9803,14310,48204,50324,64319,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	114089291	114152440	chr1:114089291-114152440	1	-	114093785	114139871	789624	8	2791,69,151,172,121,559,266,223,	0,4443,8435,9802,14309,48203,50323,62926,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	114089291	114152917	chr1:114089291-114152917	1	-	114093785	114139871	789624	8	2791,69,151,172,121,559,266,295,	0,4443,8435,9802,14309,48203,50323,63331,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	114089292	114153850	chr1:114089292-114153850	3	-	114093785	114139871	789624	8	2790,69,151,172,121,559,266,241,	0,4442,8434,9801,14308,48202,50322,64317,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	114089326	114153919	chr1:114089326-114153919	1	-	114093785	114153772	789624	8	2756,69,151,172,121,559,349,310,	0,4408,8400,9767,14274,48168,50288,64283,
#Partially deleted in new
chr1	114091764	114153850	chr1:114091764-114153850	0	-	114139827	114153772	789624	8	318,69,151,172,121,559,266,241,	0,1970,5962,7329,11836,45730,47850,61845,
#Partially deleted in new
chr1	114092010	114153772	chr1:114092010-114153772	1	-	114092010	114153772	789624	7	72,151,172,121,559,349,163,	0,5716,7083,11590,45484,47604,61599,
#Partially deleted in new
chr1	114137668	114152957	chr1:114137668-114152957	0	-	114137668	114139871	789624	3	385,266,192,	0,1946,15097,
#Partially deleted in new
chr1	114138045	114152980	chr1:114138045-114152980	0	-	114138045	114139871	789624	3	8,349,215,	0,1569,14720,
#Partially deleted in new
chr1	114139652	114152922	chr1:114139652-114152922	0	-	114139652	114152686	789624	2	311,300,	0,12970,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	114206426	114262278	chr1:114206426-114262278	3	-	114206426	114206426	8553170	2	259,73,	0,55779,
#Deleted in new
chr1	114279010	114279275	chr1:114279010-114279275	7	-	114279010	114279010	16724991	1	265,	0,
#Partially deleted in new
chr1	114353985	114355178	chr1:114353985-114355178	7	+	114353985	114353985	16724991	2	784,80,	0,1113,
#Partially deleted in new
chr1	114392776	114511160	chr1:114392776-114511160	3	-	114397647	114511076	0	20	5084,51,153,75,124,350,160,64,133,201,165,275,118,147,115,117,133,145,119,610,	0,5163,6680,8612,9983,12633,14164,15900,17407,28659,31814,32672,34400,34971,38021,40840,70327,70635,71493,117774,
#Deleted in new
chr1	114396257	114397838	chr1:114396257-114397838	0	-	114396257	114396257	8553170	2	248,107,	0,1474,
#Partially deleted in new
chr1	114397607	114511160	chr1:114397607-114511160	1	-	114397647	114511076	0	19	253,153,75,124,350,160,64,133,201,165,275,118,147,115,117,133,145,119,610,	0,1849,3781,5152,7802,9333,11069,12576,23828,26983,27841,29569,30140,33190,36009,65496,65804,66662,112943,
#Partially deleted in new
chr1	114397607	114463236	chr1:114397607-114463236	0	-	114397647	114463236	789624	18	253,51,153,75,124,350,160,64,133,72,201,165,275,118,147,115,117,133,	0,332,1849,3781,5152,7802,9333,11069,12576,22772,23828,26983,27841,29569,30140,33190,36009,65496,
#Deleted in new
chr1	114397607	114399609	chr1:114397607-114399609	0	-	114397607	114397607	8553170	2	383,153,	0,1849,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	114404325	114406967	chr1:114404325-114406967	0	-	114404325	114404325	8553170	2	1434,27,	0,2615,
#Partially deleted in new
chr1	114459933	114460360	chr1:114459933-114460360	7	+	114459933	114459933	16724991	1	427,	0,
#Deleted in new
chr1	114468314	114469282	chr1:114468314-114469282	7	+	114468314	114468314	16724991	1	968,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	114490723	114490832	chr1:114490723-114490832	3	+	114490723	114490723	8553170	1	109,	0,
#Partially deleted in new
chr1	114535994	114537840	chr1:114535994-114537840	7	+	114535994	114535994	16724991	2	1459,64,	0,1782,
#Partially deleted in new
chr1	114567556	114581639	chr1:114567556-114581639	3	-	114568129	114581591	0	7	700,81,51,162,71,93,141,	0,2435,3143,8033,9131,13742,13942,
#Partially deleted in new
chr1	114567883	114581629	chr1:114567883-114581629	0	-	114567883	114567883	8553170	6	373,81,51,162,93,131,	0,2108,2816,7706,13415,13615,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	114582847	114670111	chr1:114582847-114670111	3	-	114585599	114625984	789624	18	2784,87,237,106,42,178,149,141,78,70,110,188,45,97,113,137,1010,129,	0,4539,4868,11625,12984,16426,17356,17972,18660,19277,22074,25838,28225,35538,40139,40659,42331,87135,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr1	114582849	114670035	chr1:114582849-114670035	1	-	114585599	114625984	789624	21	2782,87,237,106,42,178,149,141,78,70,110,188,45,97,171,113,137,1010,112,257,53,	0,4537,4866,11623,12982,16424,17354,17970,18658,19275,22072,25836,28223,35536,39045,40137,40657,42329,62598,71655,87133,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	114582850	114626193	chr1:114582850-114626193	1	-	114585599	114625984	789624	19	704,1062,87,237,106,42,178,149,141,78,70,110,188,45,97,171,113,137,1015,	0,1719,4536,4865,11622,12981,16423,17353,17969,18657,19274,22071,25835,28222,35535,39044,40136,40656,42328,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	114582850	114588557	chr1:114582850-114588557	0	-	114582850	114582850	8553170	5	752,1100,87,237,38,	0,1681,4536,4865,5669,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	114586735	114625325	chr1:114586735-114625325	0	-	114586735	114586735	8553170	18	738,237,106,296,42,178,149,141,78,70,110,188,45,97,171,113,84,147,	0,980,7737,8619,9096,12538,13468,14084,14772,15389,18186,21950,24337,31650,35159,36251,36824,38443,
#Partially deleted in new
chr1	114625697	114670422	chr1:114625697-114670422	0	-	114625697	114625697	8553170	2	491,182,	0,44543,
#Partially deleted in new
chr1	114673089	114695473	chr1:114673089-114695473	0	-	114679682	114695473	789624	14	183,111,174,121,164,127,164,132,195,130,166,166,181,37,	0,549,819,1662,2440,2787,4261,4820,5243,6489,11109,13655,15471,22347,
#Partially deleted in new
chr1	114673097	114695586	chr1:114673097-114695586	3	-	114673113	114695570	789624	16	175,111,174,121,164,127,164,132,195,130,220,166,166,181,12,137,	0,541,811,1654,2432,2779,4253,4812,5235,6481,7161,11101,13647,15463,20338,22352,
#Partially deleted in new
chr1	114673100	114695618	chr1:114673100-114695618	1	-	114673113	114695570	789624	15	172,111,174,121,164,127,164,132,195,130,220,166,166,181,169,	0,538,808,1651,2429,2776,4250,4809,5232,6478,7158,11098,13644,15460,22349,
#Partially deleted in new
chr1	114673186	114684489	chr1:114673186-114684489	0	-	114673186	114673186	8553170	13	86,111,174,121,116,32,164,132,195,130,220,166,46,	0,452,722,1565,2343,2785,4164,4723,5146,6392,7072,11012,11257,
#Deleted in new
chr1	114673186	114676258	chr1:114673186-114676258	0	-	114673186	114673186	8553170	7	86,111,174,121,164,127,18,	0,452,722,1565,2343,2690,3054,
#Deleted in new
chr1	114673187	114676238	chr1:114673187-114676238	0	-	114673187	114673187	8553170	5	85,111,174,204,709,	0,451,721,1564,2342,
#Partially deleted in new
chr1	114679688	114686999	chr1:114679688-114686999	0	-	114679688	114679688	8553170	3	20,166,255,	0,4510,7056,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	114697626	114697924	chr1:114697626-114697924	3	-	114697626	114697626	8553170	1	298,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	114704468	114716894	chr1:114704468-114716894	3	-	114708534	114716160	0	7	3582,39,124,160,179,128,237,	0,3685,4062,5100,9331,11581,12189,
#Partially deleted in new
chr1	114716912	114757983	chr1:114716912-114757983	1	-	114718168	114739890	0	19	1304,133,164,179,120,113,176,108,165,141,213,126,129,82,98,110,199,387,59,	0,1700,2666,3626,6970,8308,9298,10070,13345,13595,15691,16819,17076,17529,19845,21050,22779,32908,41012,
#Partially deleted in new
chr1	114716913	114758050	chr1:114716913-114758050	1	-	114718168	114741664	0	21	1303,133,164,179,120,113,176,108,165,141,213,126,129,82,98,93,110,199,147,387,126,	0,1699,2665,3625,6969,8307,9297,10069,13344,13594,15690,16818,17075,17528,19844,20557,21049,22778,24613,32907,41011,
#Partially deleted in new
chr1	114716915	114750190	chr1:114716915-114750190	1	-	114718168	114741664	0	20	1301,133,164,179,120,113,176,108,165,141,213,126,129,82,98,93,110,199,147,370,	0,1697,2663,3623,6967,8305,9295,10067,13342,13592,15688,16816,17073,17526,19842,20555,21047,22776,24611,32905,
#Partially deleted in new
chr1	114716916	114757964	chr1:114716916-114757964	3	-	114718168	114739890	0	20	1300,133,164,179,120,113,176,108,165,141,213,126,129,82,98,93,110,199,387,40,	0,1696,2662,3622,6966,8304,9294,10066,13341,13591,15687,16815,17072,17525,19841,20554,21046,22775,32904,41008,
#Partially deleted in new
chr1	114717294	114757974	chr1:114717294-114757974	1	-	114718168	114739890	0	18	922,133,164,179,120,113,176,108,165,141,213,126,129,82,98,110,199,50,	0,1318,2284,3244,6588,7926,8916,9688,12963,13213,15309,16437,16694,17147,19463,20668,22397,40630,
#Partially deleted in new
chr1	114717304	114758027	chr1:114717304-114758027	1	-	114718168	114737974	789624	18	912,133,164,179,120,113,176,108,165,141,213,126,129,82,98,110,387,103,	0,1308,2274,3234,6578,7916,8906,9678,12953,13203,15299,16427,16684,17137,19453,20658,32516,40620,
#Partially deleted in new
chr1	114717311	114758003	chr1:114717311-114758003	1	-	114718168	114741664	0	20	905,133,164,179,120,113,176,108,165,141,213,126,129,82,98,110,199,147,387,79,	0,1301,2267,3227,6571,7909,8899,9671,12946,13196,15292,16420,16677,17130,19446,20651,22380,24215,32509,40613,
#Partially deleted in new
chr1	114717801	114718938	chr1:114717801-114718938	0	-	114717801	114717801	8553170	2	415,326,	0,811,
#Partially deleted in new
chr1	114717956	114757982	chr1:114717956-114757982	1	-	114718168	114739890	0	19	260,133,164,179,120,113,176,108,165,141,213,126,129,82,98,93,110,199,58,	0,656,1622,2582,5926,7264,8254,9026,12301,12551,14647,15775,16032,16485,18801,19514,20006,21735,39968,
#Partially deleted in new
chr1	114720215	114726348	chr1:114720215-114726348	0	-	114720215	114720215	8553170	4	502,120,113,138,	0,3667,5005,5995,
#Partially deleted in new
chr1	114720577	114724287	chr1:114720577-114724287	0	-	114720577	114720577	8553170	2	140,405,	0,3305,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	114727719	114727824	chr1:114727719-114727824	3	+	114727719	114727719	8553170	1	105,	0,
#Partially deleted in new
chr1	114733768	114757987	chr1:114733768-114757987	0	-	114733768	114737974	789624	6	89,129,82,98,110,63,	0,220,673,2989,4194,24156,
#Partially deleted in new
chr1	114736757	114757969	chr1:114736757-114757969	0	-	114736757	114737974	789624	5	98,110,34,234,45,	0,1205,2934,13216,21167,
#Partially deleted in new
chr1	114737987	114746859	chr1:114737987-114746859	0	-	114737987	114739890	789624	3	85,199,317,	0,1704,8555,
#Partially deleted in new
chr1	114739752	114758676	chr1:114739752-114758676	0	-	114739752	114739890	789624	3	138,387,101,	0,10068,18823,
#Partially deleted in new
chr1	114739869	114757987	chr1:114739869-114757987	0	-	114739869	114739890	789624	3	53,387,63,	0,9951,18055,
#Partially deleted in new
chr1	114748316	114757987	chr1:114748316-114757987	0	-	114748316	114748316	8553170	3	102,387,63,	0,1504,9608,
#Partially deleted in new
chr1	114749820	114757987	chr1:114749820-114757987	0	-	114749820	114749820	8553170	3	387,112,63,	0,6956,8104,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	114769478	114780685	chr1:114769478-114780685	1	-	114774270	114780607	789624	5	4894,114,143,106,249,	0,6867,9663,10631,10958,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	114772774	114780677	chr1:114772774-114780677	3	-	114774270	114780607	789624	5	1598,114,143,106,229,	0,3571,6367,7335,7674,
#Partially deleted in new
chr1	114774141	114780190	chr1:114774141-114780190	0	-	114774141	114774141	8553170	3	231,143,81,	0,5000,5968,
#Partially deleted in new
chr1	114774344	114780512	chr1:114774344-114780512	0	-	114774344	114774344	8553170	4	28,114,143,64,	0,2001,4797,6104,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	114776383	114780611	chr1:114776383-114780611	0	-	114776383	114776383	8553170	4	76,123,143,163,	0,2548,2758,4065,
#Deleted in new
chr1	114779097	114780537	chr1:114779097-114780537	0	-	114779097	114779097	8553170	3	187,106,101,	0,1012,1339,
#Deleted in new
chr1	114779106	114780685	chr1:114779106-114780685	0	-	114779106	114779106	8553170	2	178,237,	0,1342,
#Deleted in new
chr1	114779106	114780634	chr1:114779106-114780634	0	-	114779106	114779106	8553170	3	178,106,186,	0,1003,1342,
#Deleted in new
chr1	114779113	114780627	chr1:114779113-114780627	0	-	114779113	114779113	8553170	2	171,241,	0,1273,
#Deleted in new
chr1	114779201	114780495	chr1:114779201-114780495	0	-	114779201	114779201	8553170	2	83,386,	0,908,
#Partially deleted in new
chr1	114837226	114851453	chr1:114837226-114851453	7	+	114837226	114837226	16724991	7	466,136,255,100,106,103,211,	0,2044,8524,8997,10665,11448,14016,
#Partially deleted in new
chr1	114854802	114995370	chr1:114854802-114995370	3	+	114855464	114995019	0	32	216,132,85,44,54,165,68,74,59,70,74,109,95,185,68,62,105,104,118,71,82,63,63,117,111,93,75,60,177,144,90,489,	0,638,1770,2429,2641,3744,4940,5933,19703,21266,21934,23291,30732,31322,32823,40645,55594,56676,58230,59172,68646,71475,71698,89536,90069,91486,92443,122754,126533,129922,139895,140079,
#Partially deleted in new
chr1	114854867	114977610	chr1:114854867-114977610	0	+	114855464	114977610	789624	28	151,135,85,44,54,165,68,74,59,70,74,109,95,185,68,62,105,104,118,71,82,63,63,117,111,93,75,54,	0,570,1705,2364,2576,3679,4875,5868,19638,21201,21869,23226,30667,31257,32758,40580,55529,56611,58165,59107,68581,71410,71633,89471,90004,91421,92378,122689,
#Partially deleted in new
chr1	114854867	114995019	chr1:114854867-114995019	1	+	114855464	114995019	789624	31	151,135,85,44,54,165,68,74,59,70,74,109,95,185,68,62,105,104,118,71,82,63,63,117,111,93,60,177,144,90,138,	0,570,1705,2364,2576,3679,4875,5868,19638,21201,21869,23226,30667,31257,32758,40580,55529,56611,58165,59107,68581,71410,71633,89471,90004,91421,122689,126468,129857,139830,140014,
#Partially deleted in new
chr1	114854867	114995019	chr1:114854867-114995019	1	+	114855464	114995019	0	32	151,135,85,44,54,165,68,74,59,70,74,109,95,185,68,62,105,104,118,71,82,63,63,117,111,93,75,60,177,144,90,138,	0,570,1705,2364,2576,3679,4875,5868,19638,21201,21869,23226,30667,31257,32758,40580,55529,56611,58165,59107,68581,71410,71633,89471,90004,91421,92378,122689,126468,129857,139830,140014,
#Partially deleted in new
chr1	114855132	114995367	chr1:114855132-114995367	1	+	114855464	114995019	0	32	149,132,85,44,54,165,68,74,59,70,74,109,95,185,68,62,105,104,118,71,82,63,63,117,111,93,75,60,177,144,90,486,	0,308,1440,2099,2311,3414,4610,5603,19373,20936,21604,22961,30402,30992,32493,40315,55264,56346,57900,58842,68316,71145,71368,89206,89739,91156,92113,122424,126203,129592,139565,139749,
#Partially deleted in new
chr1	114858549	114876882	chr1:114858549-114876882	0	+	114858549	114858549	8553170	6	162,68,74,59,70,146,	0,1193,2186,15956,17519,18187,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	114859687	114863110	chr1:114859687-114863110	0	+	114859687	114859687	8553170	3	123,74,199,	0,1048,3224,
#Partially deleted in new
chr1	114910078	114944947	chr1:114910078-114944947	0	+	114910078	114910078	8553170	9	35,105,104,118,82,63,63,117,76,	0,318,1400,2954,13370,16199,16422,34260,34793,
#Partially deleted in new
chr1	114910197	114923634	chr1:114910197-114923634	0	+	114910197	114910197	8553170	5	304,104,118,71,186,	0,1281,2835,3777,13251,
#Partially deleted in new
chr1	114977556	114995354	chr1:114977556-114995354	0	+	114977556	114977556	8553170	4	60,177,90,473,	0,3779,17141,17325,
#Deleted in new
chr1	115029823	115034309	chr1:115029823-115034309	3	+	115033362	115034227	789624	3	37,163,337,	0,3538,4149,
#Deleted in new
chr1	115033362	115034284	chr1:115033362-115034284	1	+	115033362	115034227	789624	2	162,312,	0,610,
#Partially deleted in new
chr1	115048010	115089464	chr1:115048010-115089464	3	-	115050489	115089432	789624	8	2545,84,72,99,75,98,103,101,	0,5368,9526,10872,12453,14124,24894,41353,
#Partially deleted in new
chr1	115050355	115089500	chr1:115050355-115089500	1	-	115050489	115089432	789624	7	200,84,72,99,98,103,137,	0,3023,7181,8527,11779,22549,39008,
#Partially deleted in new
chr1	115050382	115089414	chr1:115050382-115089414	0	-	115050489	115089414	789624	7	173,72,99,75,98,103,51,	0,7154,8500,10081,11752,22522,38981,
#Partially deleted in new
chr1	115050444	115058425	chr1:115050444-115058425	0	-	115050444	115050444	8553170	4	111,84,72,197,	0,2934,7092,7784,
#Partially deleted in new
chr1	115099671	115102658	chr1:115099671-115102658	3	+	115099671	115099671	8553170	2	80,411,	0,2576,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	115270766	115283763	chr1:115270766-115283763	3	-	115270766	115270766	8553170	4	650,314,176,214,	0,2793,5692,12783,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	115283033	115368072	chr1:115283033-115368072	3	+	115283033	115283033	8553170	2	207,2403,	0,82636,
#Partially deleted in new
chr1	115285917	115338236	chr1:115285917-115338236	3	-	115286069	115286795	0	3	890,124,33,	0,7709,52286,
#Deleted in new
chr1	115471940	115476027	chr1:115471940-115476027	7	+	115471940	115471940	16724991	5	112,132,306,144,100,	0,718,2878,3556,3987,
#Partially deleted in new
chr1	115479427	115481572	chr1:115479427-115481572	7	+	115479427	115479427	16724991	2	51,247,	0,1898,
#Partially deleted in new
chr1	115556825	115557475	chr1:115556825-115557475	7	+	115556825	115556825	16724991	2	224,121,	0,529,
#Partially deleted in new
chr1	115564600	115565432	chr1:115564600-115565432	7	+	115564600	115564600	16724991	1	832,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	115577228	115577786	chr1:115577228-115577786	7	-	115577228	115577228	16724991	1	558,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	115606470	115606768	chr1:115606470-115606768	3	+	115606470	115606470	8553170	1	298,	0,
#Deleted in new
chr1	115621871	115622005	chr1:115621871-115622005	3	-	115621871	115621871	8553170	1	134,	0,
#Partially deleted in new
chr1	115641952	115698224	chr1:115641952-115698224	3	+	115651413	115691379	789624	8	134,208,133,608,134,133,235,7106,	0,9324,17688,21708,40411,41991,43340,49166,
#Partially deleted in new
chr1	115641990	115698224	chr1:115641990-115698224	1	+	115651413	115691379	789624	8	96,208,127,608,134,133,235,7106,	0,9286,17650,21670,40373,41953,43302,49128,
#Partially deleted in new
chr1	115642628	115691854	chr1:115642628-115691854	1	+	115651413	115691379	789624	8	78,208,133,608,134,133,235,736,	0,8648,17012,21032,39735,41315,42664,48490,
#Partially deleted in new
chr1	115651401	115691854	chr1:115651401-115691854	1	+	115651413	115691379	789624	7	83,133,608,134,133,235,736,	0,8239,12259,30962,32542,33891,39717,
#Partially deleted in new
chr1	115671044	115684076	chr1:115671044-115684076	0	+	115671044	115671044	8553170	3	103,127,133,	0,11326,12899,
#Partially deleted in new
chr1	115671143	115684076	chr1:115671143-115684076	0	+	115671143	115671143	8553170	3	194,134,133,	0,11220,12800,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	115700006	115768781	chr1:115700006-115768781	3	-	115701240	115768541	0	11	1420,75,101,55,46,131,74,112,101,85,474,	0,2914,5185,17833,25501,26985,32894,38217,40721,44821,68301,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	115727024	115732927	chr1:115727024-115732927	0	-	115727024	115727024	8553170	3	98,95,27,	0,5089,5876,
#Deleted in new
chr1	115836376	115841126	chr1:115836376-115841126	1	-	115837964	115838372	789624	3	2004,329,179,	0,3839,4571,
#Deleted in new
chr1	115836691	115843917	chr1:115836691-115843917	3	-	115837964	115838372	789624	1	7226,	0,
#Deleted in new
chr1	115838051	115840741	chr1:115838051-115840741	0	-	115838051	115838372	789624	2	329,526,	0,2164,
#Partially deleted in new
chr1	115856909	115857819	chr1:115856909-115857819	7	-	115856909	115856909	16724991	1	910,	0,
#Partially deleted in new
chr1	115916496	115916699	chr1:115916496-115916699	7	+	115916496	115916496	16724991	1	203,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	115919349	115931561	chr1:115919349-115931561	3	+	115919349	115919349	8553170	4	210,79,1207,247,	0,3017,5426,11965,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	115919387	115925901	chr1:115919387-115925901	0	+	115919387	115919387	789624	3	172,200,1126,	0,2979,5388,
#Partially deleted in new
chr1	115976497	116070054	chr1:115976497-116070054	3	+	115976627	116067108	789624	12	217,213,133,165,130,216,141,86,121,73,189,3036,	0,15533,43084,44223,50395,54868,58689,60805,86264,87938,90022,90521,
#Partially deleted in new
chr1	115976613	116031890	chr1:115976613-116031890	1	+	115976627	116031412	789624	6	101,213,133,165,130,488,	0,15417,42968,44107,50279,54789,
#Partially deleted in new
chr1	116013812	116017705	chr1:116013812-116017705	3	-	116013812	116013812	8553170	3	271,180,254,	0,1308,3639,
#Deleted in new
chr1	116032676	116037527	chr1:116032676-116037527	0	+	116032676	116032676	8553170	3	124,141,225,	0,2510,4626,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	116111754	116135240	chr1:116111754-116135240	3	+	116112615	116133365	789624	7	56,257,141,292,179,195,2109,	0,652,9177,12311,15711,16390,21377,
#Partially deleted in new
chr1	116123872	116128247	chr1:116123872-116128247	0	+	116123872	116123872	8553170	4	27,292,179,103,	0,193,3593,4272,
#Partially deleted in new
chr1	116164283	116166241	chr1:116164283-116166241	3	+	116164283	116164283	8553170	2	60,854,	0,1104,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	116278605	116278821	chr1:116278605-116278821	3	+	116278605	116278605	8553170	1	216,	0,
#Partially deleted in new
chr1	116372667	116388155	chr1:116372667-116388155	0	+	116384094	116388155	789624	5	254,111,60,204,25,	0,11346,12115,14620,15463,
#Partially deleted in new
chr1	116373259	116404774	chr1:116373259-116404774	3	+	116373511	116404444	789624	23	264,111,60,204,114,135,118,269,199,110,135,193,176,137,151,169,155,124,146,131,102,92,359,	0,10754,11523,14028,14871,15378,15642,16179,16953,17522,19594,20271,21850,23338,24628,25361,25670,26160,27601,27870,28294,30624,31156,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	116373268	116386144	chr1:116373268-116386144	0	+	116373268	116373268	8553170	3	255,111,1362,	0,10745,11514,
#Partially deleted in new
chr1	116373866	116404772	chr1:116373866-116404772	1	+	116374229	116404444	789624	23	375,111,60,204,114,135,118,269,199,110,135,193,176,137,151,169,155,124,146,131,102,92,357,	0,10147,10916,13421,14264,14771,15035,15572,16346,16915,18987,19664,21243,22731,24021,24754,25063,25553,26994,27263,27687,30017,30549,
#Partially deleted in new
chr1	116382410	116388663	chr1:116382410-116388663	0	+	116384094	116388663	789624	6	183,111,60,204,114,26,	0,1603,2372,4877,5720,6227,
#Partially deleted in new
chr1	116383369	116404772	chr1:116383369-116404772	1	+	116384094	116404444	789624	23	184,111,60,204,114,135,118,269,199,110,135,193,176,137,151,169,155,124,146,131,102,92,357,	0,644,1413,3918,4761,5268,5532,6069,6843,7412,9484,10161,11740,13228,14518,15251,15560,16050,17491,17760,18184,20514,21046,
#Deleted in new
chr1	116387302	116388525	chr1:116387302-116388525	0	+	116387302	116387302	8553170	2	189,395,	0,828,
#Deleted in new
chr1	116388726	116389940	chr1:116388726-116389940	0	+	116388726	116388726	8553170	3	46,118,502,	0,175,712,
#Partially deleted in new
chr1	116392246	116418622	chr1:116392246-116418622	0	-	116392246	116392246	5263520	3	780,236,164,	0,8649,26212,
#Partially deleted in new
chr1	116398999	116418575	chr1:116398999-116418575	0	-	116398999	116398999	5263520	3	315,236,117,	0,1896,19459,
#Partially deleted in new
chr1	116399470	116410261	chr1:116399470-116410261	0	+	116399470	116410156	789624	5	73,146,131,102,127,	0,1390,1659,2083,10664,
#Deleted in new
chr1	116401129	116402033	chr1:116401129-116402033	0	+	116401129	116401129	8553170	2	131,480,	0,424,
#Partially deleted in new
chr1	116405508	116418536	chr1:116405508-116418536	1	-	116405508	116405508	5263520	3	640,55,78,	0,5752,12950,
#Partially deleted in new
chr1	116405511	116418564	chr1:116405511-116418564	3	-	116405511	116405511	5263520	3	637,268,106,	0,1416,12947,
#Partially deleted in new
chr1	116406108	116410261	chr1:116406108-116410261	0	+	116406108	116406108	8553170	2	290,127,	0,4026,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	116413765	116413869	chr1:116413765-116413869	3	-	116413765	116413765	8553170	1	104,	0,
#Partially deleted in new
chr1	116423723	116478808	chr1:116423723-116478808	3	-	116423723	116423723	789624	4	192,113,121,28,	0,4658,54328,55057,
#Partially deleted in new
chr1	116429048	116433368	chr1:116429048-116433368	3	-	116429048	116429048	8553170	2	232,283,	0,4037,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	116452535	116452627	chr1:116452535-116452627	3	+	116452535	116452535	8553170	1	92,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	116452645	116478842	chr1:116452645-116478842	1	-	116452645	116452645	8553170	4	287,151,121,62,	0,2419,25406,26135,
#Partially deleted in new
chr1	116453033	116466442	chr1:116453033-116466442	1	-	116453033	116453033	8553170	3	135,151,253,	0,2031,13156,
#Partially deleted in new
chr1	116453034	116478227	chr1:116453034-116478227	0	-	116453034	116453034	8553170	3	134,151,176,	0,2030,25017,
#Partially deleted in new
chr1	116453034	116478826	chr1:116453034-116478826	1	-	116453034	116453034	789624	4	134,151,105,46,	0,2030,21199,25746,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	116463720	116466452	chr1:116463720-116466452	0	-	116463720	116463720	8553170	2	217,263,	0,2469,
#Partially deleted in new
chr1	116493015	116499212	chr1:116493015-116499212	3	-	116493015	116493015	8553170	2	1891,411,	0,5786,
#Partially deleted in new
chr1	116514534	116571039	chr1:116514534-116571039	3	-	116514812	116570972	0	6	288,37,78,264,294,137,	0,4696,7371,21430,29776,56368,
#Partially deleted in new
chr1	116514738	116570984	chr1:116514738-116570984	0	-	116519294	116570972	0	6	84,72,78,264,294,82,	0,4492,7167,21226,29572,56164,
#Partially deleted in new
chr1	116518699	116571026	chr1:116518699-116571026	1	-	116519226	116570972	0	5	568,78,264,294,124,	0,3206,17265,25611,52203,
#Partially deleted in new
chr1	116519230	116544590	chr1:116519230-116544590	0	-	116519230	116544590	789624	3	37,78,280,	0,2675,25080,
#Partially deleted in new
chr1	116521786	116571039	chr1:116521786-116571039	1	-	116521888	116570972	789624	4	197,264,294,137,	0,14178,22524,49116,
#Deleted in new
chr1	116532935	116534092	chr1:116532935-116534092	7	-	116532935	116532935	16724991	1	1157,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	116560023	116560111	chr1:116560023-116560111	3	-	116560023	116560023	5263520	1	88,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	116574398	116667755	chr1:116574398-116667755	3	-	116577311	116666326	789624	12	3164,486,408,411,405,402,60,390,411,378,673,138,	0,4993,10246,14295,25542,29225,32093,33543,39366,41681,91885,93219,
#Partially deleted in new
chr1	116574408	116667753	chr1:116574408-116667753	1	-	116577311	116666326	789624	11	3154,486,408,411,405,402,390,411,378,673,136,	0,4983,10236,14285,25532,29215,33533,39356,41671,91875,93209,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	116577219	116666431	chr1:116577219-116666431	1	-	116577311	116666326	789624	11	343,486,408,411,405,402,60,390,411,378,148,	0,2172,7425,11474,22721,26404,29272,30722,36545,38860,89064,
#Partially deleted in new
chr1	116616263	116646945	chr1:116616263-116646945	0	-	116616263	116616278	8553170	2	194,74,	0,30608,
#Deleted in new
chr1	116671748	116671827	chr1:116671748-116671827	3	+	116671748	116671748	5263520	1	79,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	116694111	116706603	chr1:116694111-116706603	3	+	116694111	116694111	789624	4	86,97,56,147,	0,647,11837,12345,
#Deleted in new
chr1	116713832	116714835	chr1:116713832-116714835	7	-	116713832	116713832	16724991	1	1003,	0,
#Deleted in new
chr1	116739980	116742609	chr1:116739980-116742609	7	-	116739980	116739980	16724991	1	2629,	0,
#Partially deleted in new
chr1	116754384	116769228	chr1:116754384-116769228	3	+	116754492	116768783	0	5	169,321,231,123,765,	0,246,6017,10099,14079,
#Deleted in new
chr1	116754466	116755021	chr1:116754466-116755021	1	+	116754492	116754971	789624	2	87,391,	0,164,
#Partially deleted in new
chr1	116775103	116775623	chr1:116775103-116775623	7	-	116775103	116775103	16724991	1	520,	0,
#Deleted in new
chr1	116909148	116909531	chr1:116909148-116909531	3	-	116909148	116909148	8553170	1	383,	0,
#Partially deleted in new
chr1	116910056	116990358	chr1:116910056-116990358	3	+	116910203	116986967	789624	9	196,369,414,381,426,420,108,306,3558,	0,31658,34622,39135,51186,56854,64159,74623,76744,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	116962346	116962471	chr1:116962346-116962471	7	-	116962346	116962346	16724991	1	125,	0,
#Partially deleted in new
chr1	116967059	116974497	chr1:116967059-116974497	0	+	116967059	116967059	8553170	2	271,282,	0,7156,
#Deleted in new
chr1	116987039	116990350	chr1:116987039-116990350	0	+	116987039	116987039	8553170	2	45,412,	0,2899,
#Partially deleted in new
chr1	117001749	117034250	chr1:117001749-117034250	1	+	117001817	117034101	789624	9	111,381,417,387,384,405,411,396,391,	0,8100,9800,11656,15340,16406,19823,23759,32110,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	117001811	117036417	chr1:117001811-117036417	3	+	117001817	117034101	789624	10	49,381,417,387,384,405,411,396,275,219,	0,8038,9738,11594,15278,16344,19761,23697,32048,34387,
#Partially deleted in new
chr1	117025481	117059490	chr1:117025481-117059490	3	-	117025481	117025481	789624	4	1305,223,168,118,	0,6632,24685,33891,
#Partially deleted in new
chr1	117026296	117032521	chr1:117026296-117032521	0	-	117026296	117026296	8553170	2	490,132,	0,6093,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr1	117060302	117107453	chr1:117060302-117107453	3	+	117060346	117101524	789624	23	72,103,87,67,990,115,183,128,82,120,151,106,182,154,92,83,134,171,59,151,83,75,6074,	0,152,2084,13358,14567,15877,16338,17613,19265,21525,23715,26114,28498,29752,30229,31025,31514,32428,35006,35846,37048,38530,41077,
#Partially deleted in new
chr1	117060361	117075444	chr1:117060361-117075444	0	+	117060361	117060361	8553170	5	13,107,87,67,575,	0,93,2025,13299,14508,
#Deleted in new
chr1	117075294	117076389	chr1:117075294-117076389	0	+	117075294	117075294	8553170	2	565,210,	0,885,
#Partially deleted in new
chr1	117092786	117101749	chr1:117092786-117101749	0	+	117092786	117092786	8553170	6	115,59,151,33,75,370,	0,2522,3362,5419,6046,8593,
#Deleted in new
chr1	117094642	117094728	chr1:117094642-117094728	3	+	117094642	117094642	5263520	1	86,	0,
#Partially deleted in new
chr1	117095324	117101656	chr1:117095324-117101656	0	+	117095324	117095324	8553170	6	43,151,83,33,75,277,	0,824,2026,2881,3508,6055,
#Partially deleted in new
chr1	117096170	117102362	chr1:117096170-117102362	0	+	117096170	117101524	789624	5	129,83,75,183,169,	0,1180,2662,5209,6023,
#Deleted in new
chr1	117098245	117101700	chr1:117098245-117101700	0	+	117098245	117098245	8553170	2	662,321,	0,3134,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	117111059	117121728	chr1:117111059-117121728	3	-	117112304	117121201	0	6	1394,127,115,130,734,1015,	0,2299,4515,5556,6974,9654,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	117111059	117121762	chr1:117111059-117121762	1	-	117112304	117121201	0	6	1394,127,115,130,680,1049,	0,2299,4515,5556,7028,9654,
#Partially deleted in new
chr1	117111059	117115612	chr1:117111059-117115612	0	-	117112304	117115612	789624	4	153,359,127,38,	0,1035,2299,4515,
#Partially deleted in new
chr1	117112184	117122587	chr1:117112184-117122587	1	-	117112304	117121864	789624	7	269,127,115,130,734,251,789,	0,1174,3390,4431,5849,8529,9614,
#Partially deleted in new
chr1	117118033	117121792	chr1:117118033-117121792	0	-	117118033	117120889	789624	3	734,188,187,	0,2680,3572,
#Partially deleted in new
chr1	117138228	117138609	chr1:117138228-117138609	7	+	117138228	117138228	16724991	1	381,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	117143586	117173266	chr1:117143586-117173266	1	-	117147657	117173227	789624	6	1639,170,279,348,65,80,	0,4026,9504,12987,26520,29600,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	117143586	117210934	chr1:117143586-117210934	3	-	117147657	117210855	789624	6	1639,170,279,348,65,111,	0,4026,9504,12987,26520,67237,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	117143587	117210960	chr1:117143587-117210960	1	-	117147657	117210855	789624	5	1638,170,279,65,137,	0,4025,9503,26519,67236,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	117143587	117203836	chr1:117143587-117203836	1	-	117147657	117156733	789624	6	1638,170,279,348,65,219,	0,4025,9503,12986,26519,60030,
#Partially deleted in new
chr1	117153208	117210927	chr1:117153208-117210927	0	-	117153208	117153208	8553170	4	161,438,65,104,	0,3365,16898,57615,
#Partially deleted in new
chr1	117156609	117210927	chr1:117156609-117210927	1	-	117156842	117210855	789624	4	365,35,65,104,	0,367,13497,54214,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	117156644	117203836	chr1:117156644-117203836	0	-	117156644	117156644	8553170	3	277,65,219,	0,13462,46973,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	117243211	117243508	chr1:117243211-117243508	3	-	117243211	117243211	8553170	1	297,	0,
#Deleted in new
chr1	117364898	117365473	chr1:117364898-117365473	3	-	117364898	117364898	8553170	1	575,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	117367448	117528872	chr1:117367448-117528872	3	+	117368183	117522957	789624	13	1037,256,97,119,81,95,124,94,116,220,173,116,6048,	0,34737,38100,47264,53120,74782,93040,98885,125698,129314,131933,135406,155376,
#Partially deleted in new
chr1	117367942	117420630	chr1:117367942-117420630	0	+	117367942	117367942	8553170	3	543,119,62,	0,46770,52626,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	117420596	117515939	chr1:117420596-117515939	0	+	117420596	117514852	789624	9	53,95,124,94,116,220,173,116,1091,	0,21634,39892,45737,72550,76166,78785,82258,94252,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	117493514	117495006	chr1:117493514-117495006	3	+	117493514	117493514	8553170	1	1492,	0,
#Partially deleted in new
chr1	117496779	117523322	chr1:117496779-117523322	0	+	117496779	117523257	789624	5	203,173,116,113,73,	0,2602,6075,26045,26470,
#Partially deleted in new
chr1	117502860	117525352	chr1:117502860-117525352	0	+	117502860	117525159	789624	3	110,113,264,	0,19964,22228,
#Partially deleted in new
chr1	117549414	117549922	chr1:117549414-117549922	7	+	117549414	117549414	16724991	1	508,	0,
#Partially deleted in new
chr1	117596831	117605711	chr1:117596831-117605711	0	-	117596831	117596831	789624	3	163,148,66,	0,7957,8814,
#Deleted in new
chr1	117603998	117605770	chr1:117603998-117605770	3	-	117603998	117603998	8553170	3	401,148,214,	0,790,1558,
#Deleted in new
chr1	117604623	117605685	chr1:117604623-117605685	1	-	117604623	117604623	8553170	2	313,129,	0,933,
#Partially deleted in new
chr1	117605933	117628372	chr1:117605933-117628372	3	+	117622868	117624044	789624	2	220,5531,	0,16908,
#Deleted in new
chr1	117640811	117641639	chr1:117640811-117641639	7	-	117640811	117640811	16724991	1	828,	0,
#Partially deleted in new
chr1	117688620	117688742	chr1:117688620-117688742	3	-	117688620	117688620	8553170	1	122,	0,
#Deleted in new
chr1	117700028	117700242	chr1:117700028-117700242	7	-	117700028	117700028	16724991	1	214,	0,
#Partially deleted in new
chr1	117778086	117778506	chr1:117778086-117778506	7	-	117778086	117778086	16724991	1	420,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	117863484	117929630	chr1:117863484-117929630	3	-	117870568	117920357	0	14	7132,144,55,140,77,77,157,160,77,89,154,140,243,183,	0,14524,18338,20003,23092,24213,33348,35572,43021,48509,49045,55112,56697,65963,
#Partially deleted in new
chr1	117870183	117887733	chr1:117870183-117887733	0	-	117870183	117870183	8553170	7	433,66,144,55,140,77,36,	0,7592,7825,11639,13304,16393,17514,
#Partially deleted in new
chr1	117877221	117929583	chr1:117877221-117929583	1	-	117877963	117920357	0	13	931,55,140,77,77,157,160,77,89,154,140,243,136,	0,4601,6266,9355,10476,19611,21835,29284,34772,35308,41375,42960,52226,
#Partially deleted in new
chr1	117882903	117899130	chr1:117882903-117899130	0	-	117882903	117882903	8553170	5	724,77,77,157,74,	0,3673,4794,13929,16153,
#Partially deleted in new
chr1	117896615	117920207	chr1:117896615-117920207	0	-	117896615	117896615	8553170	7	374,160,77,89,154,140,26,	0,2441,9890,15378,15914,21981,23566,
#Partially deleted in new
chr1	117912529	117929560	chr1:117912529-117929560	0	-	117912529	117912529	8553170	5	154,80,140,243,113,	0,890,6067,7652,16918,
#Partially deleted in new
chr1	117929719	117941788	chr1:117929719-117941788	1	+	117933319	117933682	789624	10	63,102,111,210,119,79,96,114,102,39,	0,3568,3910,4753,7049,8760,9757,11107,11404,12030,
#Partially deleted in new
chr1	117929723	117938558	chr1:117929723-117938558	0	+	117929723	117929723	8553170	6	59,102,111,210,119,79,	0,3564,3906,4749,7045,8756,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr1	117929767	117966542	chr1:117929767-117966542	3	+	117933319	117959447	789624	27	15,203,210,119,79,96,114,102,98,108,231,94,102,86,136,57,101,112,135,51,66,93,48,44,129,94,7251,	0,3520,4705,7001,8712,9709,11059,11356,11982,12669,13628,16318,18637,19983,20227,21066,22208,22529,22760,23178,23708,24239,24812,25547,27300,29142,29524,
#Partially deleted in new
chr1	117929774	117938529	chr1:117929774-117938529	0	+	117929774	117929774	8553170	5	150,203,210,119,50,	0,3513,4698,6994,8705,
#Partially deleted in new
chr1	117953860	117964810	chr1:117953860-117964810	0	-	117953860	117953860	8553170	3	189,124,130,	0,9938,10820,
#Partially deleted in new
chr1	117953863	118185223	chr1:117953863-118185223	3	-	117963798	118185157	789624	49	186,140,145,61,185,137,132,103,100,48,100,46,114,183,125,131,146,189,155,145,218,160,179,121,176,114,153,112,240,92,182,155,114,62,219,228,151,114,138,113,73,162,182,195,187,132,87,141,153,	0,9935,12745,16192,17999,19561,27406,29947,30819,33970,34241,36997,37551,38602,40542,42506,42734,51550,54180,58364,62101,69440,71374,74410,77828,82906,85428,86866,87939,100138,101869,112881,119990,120675,127237,127551,132058,132807,133007,137742,138066,139292,143806,145742,147876,161446,196679,197365,231207,
#Partially deleted in new
chr1	117953863	117966752	chr1:117953863-117966752	0	-	117953863	117953863	8553170	4	186,143,140,144,	0,1224,9935,12745,
#Partially deleted in new
chr1	117953872	117970118	chr1:117953872-117970118	0	-	117953872	117953872	8553170	6	177,124,61,53,120,63,	0,9926,10808,12300,12761,16183,
#Partially deleted in new
chr1	117965096	118008070	chr1:117965096-118008070	0	-	117966597	118008070	789624	17	1657,61,185,137,132,103,100,48,100,46,114,183,125,131,146,189,27,	0,4959,6766,8328,16173,18714,19586,22737,23008,25764,26318,27369,29309,31273,31501,40317,42947,
#Partially deleted in new
chr1	117971779	117984748	chr1:117971779-117984748	0	-	117971779	117971779	8553170	5	268,137,132,103,66,	0,1645,9490,12031,12903,
#Partially deleted in new
chr1	117973481	117987992	chr1:117973481-117987992	0	-	117973481	117973481	8553170	5	80,132,103,100,159,	0,7788,10329,11201,14352,
#Partially deleted in new
chr1	118025263	118040767	chr1:118025263-118040767	0	-	118025263	118025263	8553170	5	153,121,176,153,38,	0,3010,6428,14028,15466,
#Partially deleted in new
chr1	118031745	118039342	chr1:118031745-118039342	0	-	118031745	118031745	8553170	3	122,258,51,	0,4880,7546,
#Partially deleted in new
chr1	118054053	118081486	chr1:118054053-118081486	0	-	118054053	118054053	8553170	4	40,182,219,72,	0,1679,27047,27361,
#Partially deleted in new
chr1	118073940	118081296	chr1:118073940-118081296	0	-	118073940	118073940	8553170	4	27,62,200,196,	0,598,2393,7160,
#Deleted in new
chr1	118085977	118087162	chr1:118085977-118087162	0	-	118085977	118085977	8553170	3	95,114,292,	0,693,893,
#Partially deleted in new
chr1	118150396	118185223	chr1:118150396-118185223	0	-	118150396	118150396	8553170	3	233,141,153,	0,832,34674,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	118264371	118264489	chr1:118264371-118264489	7	-	118264371	118264371	16724991	1	118,	0,
#Partially deleted in new
chr1	118614332	118615646	chr1:118614332-118615646	7	-	118614332	118614332	16724991	1	1314,	0,
#Deleted in new
chr1	118712998	118713678	chr1:118712998-118713678	7	+	118712998	118712998	16724991	1	680,	0,
#Partially deleted in new
chr1	118883045	118989556	chr1:118883045-118989556	3	-	118884731	118931719	789624	8	2471,98,65,168,172,102,214,202,	0,15982,31069,40390,41600,43464,48573,106309,
#Partially deleted in new
chr1	118883046	118988348	chr1:118883046-118988348	1	-	118884731	118987795	789624	8	2470,98,65,168,172,102,214,758,	0,15981,31068,40389,41599,43463,48572,104544,
#Partially deleted in new
chr1	118883046	118914125	chr1:118883046-118914125	0	-	118884731	118914125	789624	4	2470,99,98,11,	0,7820,15981,31068,
#Deleted in new
chr1	119000343	119001392	chr1:119000343-119001392	3	-	119000343	119000343	789624	2	550,103,	0,946,
#Deleted in new
chr1	119000617	119001405	chr1:119000617-119001405	3	-	119000617	119000617	8553170	2	273,137,	0,651,
#Partially deleted in new
chr1	119031215	119140648	chr1:119031215-119140648	1	-	119033359	119140644	0	6	2173,119,86,81,258,94,	0,2879,11048,14366,45134,109339,
#Partially deleted in new
chr1	119031220	119140671	chr1:119031220-119140671	3	-	119032910	119140644	0	6	2139,119,86,81,258,117,	0,2874,11043,14361,45129,109334,
#Partially deleted in new
chr1	119033296	119140654	chr1:119033296-119140654	0	-	119033296	119033296	8553170	5	63,119,81,258,100,	0,798,12285,43053,107258,
#Partially deleted in new
chr1	119034128	119082541	chr1:119034128-119082541	0	-	119034128	119034128	8553170	5	85,86,81,258,202,	0,8135,11453,42221,48211,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	119047404	119064785	chr1:119047404-119064785	3	+	119047404	119047404	8553170	2	128,1932,	0,15449,
#Deleted in new
chr1	119084997	119085954	chr1:119084997-119085954	7	-	119084997	119084997	16724991	1	957,	0,
#Deleted in new
chr1	119126538	119127291	chr1:119126538-119127291	7	-	119126538	119126538	16724991	1	753,	0,
#Deleted in new
chr1	119139647	119140638	chr1:119139647-119140638	0	-	119139647	119139647	8553170	2	811,84,	0,907,
#Partially deleted in new
chr1	119140707	119142200	chr1:119140707-119142200	1	+	119140707	119140707	8553170	2	86,454,	0,1039,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	119140729	119234181	chr1:119140729-119234181	0	+	119140729	119140729	789624	5	64,67,117,182,724,	0,1017,6223,9835,92728,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	119140729	119275973	chr1:119140729-119275973	3	+	119140729	119140729	789624	7	64,67,117,182,270,43,786,	0,1017,6223,9835,120717,122172,134458,
#Deleted in new
chr1	119146408	119147033	chr1:119146408-119147033	0	+	119146408	119146408	8553170	2	428,81,	0,544,
#Deleted in new
chr1	119219313	119220096	chr1:119219313-119220096	7	-	119219313	119219313	16724991	1	783,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	119260264	119327303	chr1:119260264-119327303	3	-	119260264	119260264	8553170	3	415,142,341,	0,33761,66698,
#Deleted in new
chr1	119328175	119330815	chr1:119328175-119330815	1	+	119328175	119328175	8553170	3	112,46,284,	0,568,2356,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	119328251	119356182	chr1:119328251-119356182	3	+	119328251	119328251	789624	4	36,46,117,192,	0,492,26165,27739,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	119331396	119331525	chr1:119331396-119331525	3	-	119331396	119331396	8553170	1	129,	0,
#Partially deleted in new
chr1	119368778	119386694	chr1:119368778-119386694	0	+	119381085	119386694	789624	5	124,139,152,203,73,	0,12299,14136,16072,17843,
#Partially deleted in new
chr1	119368778	119394128	chr1:119368778-119394128	3	+	119381085	119393840	789624	9	124,220,139,152,278,210,159,70,344,	0,11725,12299,14136,15997,17843,23331,23839,25006,
#Partially deleted in new
chr1	119368808	119394130	chr1:119368808-119394130	1	+	119380692	119393840	789624	9	94,220,139,152,278,210,159,70,346,	0,11695,12269,14106,15967,17813,23301,23809,24976,
#Partially deleted in new
chr1	119368837	119394128	chr1:119368837-119394128	1	+	119381085	119393840	789624	8	65,139,152,278,210,159,70,344,	0,12240,14077,15938,17784,23272,23780,24947,
#Deleted in new
chr1	119368945	119370331	chr1:119368945-119370331	3	+	119368945	119368945	789624	2	63,248,	0,1138,
#Deleted in new
chr1	119392438	119394114	chr1:119392438-119394114	0	+	119392438	119392438	8553170	2	249,330,	0,1346,
#Partially deleted in new
chr1	119414930	119423035	chr1:119414930-119423035	3	+	119415419	119422620	789624	4	160,231,165,1227,	0,400,4487,6878,
#Partially deleted in new
chr1	119415049	119422088	chr1:119415049-119422088	0	+	119415419	119422088	789624	4	41,231,165,280,	0,281,4368,6759,
#Partially deleted in new
chr1	119415083	119423034	chr1:119415083-119423034	1	+	119415419	119422620	789624	4	119,231,165,1226,	0,247,4334,6725,
#Partially deleted in new
chr1	119415150	119419892	chr1:119415150-119419892	0	+	119415150	119415150	8553170	3	52,231,475,	0,180,4267,
#Partially deleted in new
chr1	119415162	119419605	chr1:119415162-119419605	0	+	119415162	119415162	8553170	4	40,231,131,188,	0,168,2205,4255,
#Partially deleted in new
chr1	119417412	119422023	chr1:119417412-119422023	0	+	119417412	119417412	8553170	3	86,165,215,	0,2005,4396,
#Deleted in new
chr1	119434165	119434947	chr1:119434165-119434947	7	-	119434165	119434165	16724991	1	782,	0,
#Deleted in new
chr1	119434455	119435080	chr1:119434455-119435080	5	-	119434455	119434455	16724991	1	625,	0,
#Partially deleted in new
chr1	119439000	119446086	chr1:119439000-119446086	7	+	119439000	119439000	16724991	3	144,165,809,	0,3877,6277,
#Deleted in new
chr1	119462028	119463021	chr1:119462028-119463021	7	-	119462028	119462028	16724991	1	993,	0,
#Partially deleted in new
chr1	119467220	119473803	chr1:119467220-119473803	7	+	119467220	119467220	16724991	3	145,165,801,	0,3874,5782,
#Deleted in new
chr1	119495835	119496841	chr1:119495835-119496841	7	-	119495835	119495835	16724991	1	1006,	0,
#Partially deleted in new
chr1	119507197	119511602	chr1:119507197-119511602	0	+	119507476	119511602	789624	3	22,230,100,	0,194,4305,
#Partially deleted in new
chr1	119507202	119515054	chr1:119507202-119515054	3	+	119507476	119514645	789624	4	60,230,165,1221,	0,189,4300,6631,
#Partially deleted in new
chr1	119507212	119511952	chr1:119507212-119511952	0	+	119507212	119507212	8553170	3	50,230,450,	0,179,4290,
#Deleted in new
chr1	119507239	119508024	chr1:119507239-119508024	0	+	119507239	119507239	8553170	2	23,633,	0,152,
#Partially deleted in new
chr1	119507317	119514800	chr1:119507317-119514800	1	+	119507476	119514645	789624	3	304,165,967,	0,4185,6516,
#Deleted in new
chr1	119533748	119534746	chr1:119533748-119534746	7	-	119533748	119533748	16724991	1	998,	0,
#Partially deleted in new
chr1	119538508	119545913	chr1:119538508-119545913	7	+	119538508	119538508	16724991	3	145,165,684,	0,4286,6721,
#Deleted in new
chr1	119558754	119559774	chr1:119558754-119559774	7	-	119558754	119558754	16724991	1	1020,	0,
#Partially deleted in new
chr1	119564065	119572067	chr1:119564065-119572067	7	+	119564065	119564065	16724991	3	145,163,812,	0,3825,7190,
#Partially deleted in new
chr1	119596166	119597179	chr1:119596166-119597179	7	-	119596166	119596166	16724991	1	1013,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	119597701	119599271	chr1:119597701-119599271	3	-	119597701	119597701	789624	1	1570,	0,
#Partially deleted in new
chr1	119601339	119609250	chr1:119601339-119609250	7	+	119601339	119601339	16724991	3	145,165,822,	0,3874,7089,
#Partially deleted in new
chr1	119619421	119647773	chr1:119619421-119647773	3	-	119622704	119626100	789624	3	4695,263,83,	0,6453,28269,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	119659797	119734676	chr1:119659797-119734676	0	+	119721316	119734676	789624	7	116,211,152,66,55,99,43,	0,9393,61372,63578,67053,67206,74836,
#Partially deleted in new
chr1	119708554	119721247	chr1:119708554-119721247	0	+	119712022	119721247	789624	3	46,424,78,	0,3182,12615,
#Partially deleted in new
chr1	119711714	119744226	chr1:119711714-119744226	1	+	119712022	119744040	0	12	446,152,66,55,99,133,149,153,133,131,238,341,	0,9455,11661,15136,15289,22919,23580,25399,28671,30052,31092,32171,
#Partially deleted in new
chr1	119711883	119744201	chr1:119711883-119744201	0	+	119712022	119724460	789624	13	277,152,66,151,55,99,133,149,153,133,131,238,316,	0,9286,11492,12435,14967,15120,22750,23411,25230,28502,29883,30923,32002,
#Partially deleted in new
chr1	119711883	119744094	chr1:119711883-119744094	0	+	119712022	119744040	789624	12	277,152,66,55,99,133,149,153,133,110,238,209,	0,9286,11492,14967,15120,22750,23411,25230,28502,29883,30923,32002,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	119711883	119727063	chr1:119711883-119727063	0	+	119712022	119721325	789624	5	277,485,66,55,60,	0,9286,11492,14967,15120,
#Partially deleted in new
chr1	119711885	119744212	chr1:119711885-119744212	1	+	119712022	119743018	789624	11	275,152,66,55,99,133,149,153,133,238,327,	0,9284,11490,14965,15118,22748,23409,25228,28500,30921,32000,
#Partially deleted in new
chr1	119711886	119723457	chr1:119711886-119723457	0	+	119711886	119711886	8553170	3	274,152,82,	0,9283,11489,
#Partially deleted in new
chr1	119711897	119744215	chr1:119711897-119744215	1	+	119712022	119744040	789624	10	263,152,66,55,99,133,149,153,238,330,	0,9272,11478,14953,15106,22736,23397,25216,30909,31988,
#Partially deleted in new
chr1	119711900	119744201	chr1:119711900-119744201	0	+	119711900	119711900	8553170	11	260,152,66,55,99,133,149,153,133,1278,316,	0,9269,11475,14950,15103,22733,23394,25213,28485,29866,31985,
#Partially deleted in new
chr1	119711905	119734716	chr1:119711905-119734716	0	+	119712022	119724460	789624	8	255,152,66,151,55,99,125,83,	0,9264,11470,12413,14945,15098,17603,22728,
#Partially deleted in new
chr1	119711933	119744212	chr1:119711933-119744212	1	+	119712022	119744018	789624	12	227,152,66,55,99,133,149,153,133,131,238,346,	0,9236,11442,14917,15070,22700,23361,25180,28452,29833,30873,31933,
#Partially deleted in new
chr1	119711934	119726899	chr1:119711934-119726899	0	+	119712022	119724460	789624	6	226,152,66,151,91,49,	0,9235,11441,12384,12850,14916,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	119711934	119727684	chr1:119711934-119727684	0	+	119711934	119711934	8553170	5	226,152,66,55,681,	0,9235,11441,14916,15069,
#Partially deleted in new
chr1	119711935	119744213	chr1:119711935-119744213	0	+	119712022	119724460	789624	14	225,152,66,151,183,55,99,133,149,153,133,131,238,328,	0,9234,11440,12383,12849,14915,15068,22698,23359,25178,28450,29831,30871,31950,
#Partially deleted in new
chr1	119711935	119734981	chr1:119711935-119734981	0	+	119712022	119724800	789624	7	225,152,66,91,55,99,348,	0,9234,11440,12849,14915,15068,22698,
#Partially deleted in new
chr1	119711935	119734699	chr1:119711935-119734699	0	+	119712022	119721320	789624	6	225,55,66,55,99,66,	0,9331,11440,14915,15068,22698,
#Partially deleted in new
chr1	119711935	119744202	chr1:119711935-119744202	0	+	119712022	119724460	789624	14	225,152,66,151,173,55,99,133,149,153,133,131,238,317,	0,9234,11440,12383,12849,14915,15068,22698,23359,25178,28450,29831,30871,31950,
#Partially deleted in new
chr1	119711939	119734682	chr1:119711939-119734682	0	+	119711939	119711939	8553170	7	221,152,66,55,99,125,49,	0,9230,11436,14911,15064,17569,22694,
#Partially deleted in new
chr1	119711939	119735379	chr1:119711939-119735379	0	+	119712022	119734647	789624	7	221,66,66,55,99,133,85,	0,9316,11436,14911,15064,22694,23355,
#Partially deleted in new
chr1	119711982	119735435	chr1:119711982-119735435	0	+	119712022	119735435	789624	6	178,152,55,99,133,141,	0,9187,14868,15021,22651,23312,
#Partially deleted in new
chr1	119711995	119735321	chr1:119711995-119735321	0	+	119712022	119721325	789624	7	165,165,66,55,99,133,27,	0,9174,11380,14855,15008,22638,23299,
#Partially deleted in new
chr1	119712501	119744218	chr1:119712501-119744218	0	+	119721316	119724460	789624	15	129,119,152,66,151,91,55,99,133,149,153,133,131,238,333,	0,557,8668,10874,11817,12283,14349,14502,22132,22793,24612,27884,29265,30305,31384,
#Partially deleted in new
chr1	119713098	119727080	chr1:119713098-119727080	0	+	119713098	119713098	8553170	5	362,152,66,55,77,	0,8071,10277,13752,13905,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	119714410	119744176	chr1:119714410-119744176	0	+	119714410	119714410	8553170	12	78,152,66,55,99,133,149,153,133,131,238,291,	0,6759,8965,12440,12593,20223,20884,22703,25975,27356,28396,29475,
#Partially deleted in new
chr1	119715794	119744011	chr1:119715794-119744011	0	+	119715794	119715794	8553170	12	123,152,66,55,99,133,149,153,133,131,238,126,	0,5375,7581,11056,11209,18839,19500,21319,24591,25972,27012,28091,
#Partially deleted in new
chr1	119719626	119744213	chr1:119719626-119744213	0	+	119719626	119719626	8553170	11	1695,66,55,99,133,149,153,133,131,238,328,	0,3749,7224,7377,15007,15668,17487,20759,22140,23180,24259,
#Partially deleted in new
chr1	119721275	119744215	chr1:119721275-119744215	0	+	119721275	119744014	789624	8	46,66,55,99,133,149,153,330,	0,2100,5575,5728,13358,14019,15838,22610,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	119726635	119727425	chr1:119726635-119727425	0	+	119726635	119726635	8553170	2	270,422,	0,368,
#Partially deleted in new
chr1	119727047	119730071	chr1:119727047-119730071	0	+	119727047	119727047	8553170	3	55,125,132,	0,2461,2892,
#Deleted in new
chr1	119734303	119737154	chr1:119734303-119737154	0	+	119734303	119734303	8553170	3	463,149,41,	0,991,2810,
#Deleted in new
chr1	119737218	119743012	chr1:119737218-119743012	0	+	119737218	119737218	8553170	4	48,133,131,228,	0,3167,4548,5566,
#Deleted in new
chr1	119739461	119744213	chr1:119739461-119744213	0	+	119739461	119739461	8553170	4	1057,131,238,328,	0,2305,3345,4424,
#Partially deleted in new
chr1	119747995	119768894	chr1:119747995-119768894	3	-	119750801	119768844	0	10	846,112,126,107,171,166,165,126,455,154,	0,2801,4553,5284,7431,9277,11122,11868,16176,20745,
#Partially deleted in new
chr1	119748383	119768905	chr1:119748383-119768905	1	-	119750801	119768844	0	9	458,112,126,107,171,166,165,455,165,	0,2413,4165,4896,7043,8889,10734,15788,20357,
#Partially deleted in new
chr1	119755426	119759414	chr1:119755426-119759414	0	-	119755426	119755426	8553170	3	171,166,297,	0,1846,3691,
#Partially deleted in new
chr1	119755487	119764626	chr1:119755487-119764626	0	-	119755487	119755487	8553170	4	110,166,126,455,	0,1785,4376,8684,
#Partially deleted in new
chr1	119794017	119811580	chr1:119794017-119811580	1	-	119794617	119808769	0	7	668,106,138,98,161,174,172,	0,4479,5707,9050,14685,15011,17391,
#Partially deleted in new
chr1	119794083	119811660	chr1:119794083-119811660	3	-	119794617	119808769	0	6	602,106,138,98,161,252,	0,4413,5641,8984,14619,17325,
#Partially deleted in new
chr1	119794412	119808805	chr1:119794412-119808805	1	-	119794676	119808769	789624	4	273,138,98,103,	0,5312,8655,14290,
#Partially deleted in new
chr1	119801171	119811580	chr1:119801171-119811580	1	-	119802827	119808769	0	3	1994,161,172,	0,7531,10237,
#Partially deleted in new
chr1	119834869	119844514	chr1:119834869-119844514	7	-	119834869	119834869	16724991	9	38,206,212,53,212,73,215,103,214,	0,643,1127,2437,4314,5387,6516,7563,9431,
#Deleted in new
chr1	119853315	119853748	chr1:119853315-119853748	7	+	119853315	119853315	16724991	1	433,	0,
#Deleted in new
chr1	119886303	119886927	chr1:119886303-119886927	7	+	119886303	119886303	16724991	1	624,	0,
#Deleted in new
chr1	119893532	119896495	chr1:119893532-119896495	3	-	119893963	119896336	789624	1	2963,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	119909254	119910613	chr1:119909254-119910613	3	-	119909254	119909254	8553170	1	1359,	0,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr1	119911552	120069626	chr1:119911552-120069626	3	-	119915305	120069406	0	34	5142,98,148,302,169,97,211,143,348,506,113,237,133,185,154,202,229,153,120,114,146,193,111,234,114,114,189,156,234,123,336,260,82,293,	0,6112,6853,7759,8676,10160,10683,11083,12084,13752,14946,17423,23919,25729,26304,29002,29973,36861,37454,39171,41990,43487,47839,52021,53900,54823,55880,56524,57958,75407,85444,93776,118353,157781,
#Deleted in new
chr1	119922494	119923905	chr1:119922494-119923905	0	-	119922494	119922494	8553170	2	284,269,	0,1142,
#Partially deleted in new
chr1	119935266	119937463	chr1:119935266-119937463	0	-	119935266	119935266	8553170	2	338,182,	0,2015,
#Partially deleted in new
chr1	119950119	120069626	chr1:119950119-120069626	0	-	119950119	119950119	8553170	14	718,146,193,111,234,114,114,189,156,234,123,336,260,293,	0,3423,4920,9272,13454,15333,16256,17313,17957,19391,36840,46877,55209,119214,
#Partially deleted in new
chr1	119950364	119987050	chr1:119950364-119987050	0	-	119969742	119987050	789624	12	473,146,193,111,234,114,114,189,156,234,3,91,	0,3178,4675,9027,13209,15088,16011,17068,17712,19146,25985,36595,
#Partially deleted in new
chr1	119950407	120051714	chr1:119950407-120051714	1	-	119950493	120029943	789624	15	430,146,193,111,234,114,114,189,156,234,123,336,260,83,231,	0,3135,4632,8984,13166,15045,15968,17025,17669,19103,36552,46589,54921,79498,101076,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	119992780	120054225	chr1:119992780-120054225	1	-	119996672	120029943	789624	6	3966,336,260,82,296,106,	0,4216,12548,37125,58703,61339,
#Partially deleted in new
chr1	120005232	120029963	chr1:120005232-120029963	0	-	120005232	120005232	8553170	2	356,58,	0,24673,
#Deleted in new
chr1	120076615	120077091	chr1:120076615-120077091	3	+	120076615	120076615	8553170	1	476,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	120126973	120127074	chr1:120126973-120127074	3	+	120126973	120126973	8553170	1	101,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	120150897	120176515	chr1:120150897-120176515	3	-	120157037	120176381	789624	5	6295,147,161,110,209,	0,9486,12312,17942,25409,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	120157290	120160501	chr1:120157290-120160501	0	-	120159280	120160501	789624	2	2112,118,	0,3093,
#Partially deleted in new
chr1	120197084	120319680	chr1:120197084-120319680	7	+	120197084	120197084	16724991	6	233,56,152,111,124,177,	0,54329,59518,80841,122106,122419,
#Deleted in new
chr1	120228045	120228295	chr1:120228045-120228295	3	-	120228045	120228045	8553170	1	250,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	120267333	120341871	chr1:120267333-120341871	7	-	120267333	120267333	16724991	3	505,55,155,	0,73422,74383,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	120267336	120341839	chr1:120267336-120341839	4	-	120267336	120267336	16724991	2	502,123,	0,74380,
#Partially deleted in new
chr1	120336868	120341506	chr1:120336868-120341506	4	-	120336868	120336868	16724991	4	39,194,55,159,	0,552,3887,4479,
#Partially deleted in new
chr1	120340755	120341839	chr1:120340755-120341839	5	-	120340755	120340755	16724991	2	55,123,	0,961,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	120354986	120355148	chr1:120354986-120355148	3	+	120354986	120354986	8553170	1	162,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	120432203	120434037	chr1:120432203-120434037	7	-	120432203	120432203	16724991	1	1834,	0,
#Deleted in new
chr1	120433655	120434052	chr1:120433655-120434052	5	-	120433655	120433655	16724991	1	397,	0,
#Partially deleted in new
chr1	120436352	120467739	chr1:120436352-120467739	7	+	120436352	120436352	16724991	25	345,103,215,73,212,210,103,215,73,212,210,103,215,73,206,52,164,52,173,52,173,52,173,109,1762,	0,2191,3123,4389,4925,6488,8544,9476,10741,11277,12840,14827,15764,17019,17556,19056,23014,24220,24901,25793,26441,27323,28023,28910,29625,
#Partially deleted in new
chr1	120489859	120701289	chr1:120489859-120701289	7	-	120489859	120489859	16724991	42	57,47,139,144,227,117,240,125,190,120,132,252,186,153,224,52,236,529,120,193,436,233,89,92,82,165,187,191,138,114,159,213,93,120,132,118,176,124,111,152,56,233,	0,1722,2075,3298,4374,5170,7322,11250,12068,13740,14522,15851,19625,21806,22610,23906,24965,26964,28670,29358,30374,34034,40436,46451,48463,48711,52032,53146,54087,54407,55421,58429,58781,59113,60285,83212,88846,89211,130495,151748,157013,211197,
#Partially deleted in new
chr1	120519467	120536339	chr1:120519467-120536339	4	-	120519467	120519467	16724991	7	354,436,64,233,89,212,29,	0,766,2631,4426,10828,12410,16843,
#Partially deleted in new
chr1	120528386	120548357	chr1:120528386-120548357	4	-	120528386	120528386	16724991	11	1998,212,92,82,165,195,180,138,114,159,69,	0,3491,7924,9936,10184,13505,14630,15560,15880,16894,19902,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	120571119	120571264	chr1:120571119-120571264	3	+	120571119	120571119	8553170	1	145,	0,
#Deleted in new
chr1	120670126	120670376	chr1:120670126-120670376	3	+	120670126	120670126	8553170	1	250,	0,
#Partially deleted in new
chr1	120723922	120793877	chr1:120723922-120793877	1	+	120763671	120793827	789624	6	328,82,260,336,11,116,	0,39705,61051,69238,69824,69839,
#Partially deleted in new
chr1	120723948	120840619	chr1:120723948-120840619	3	+	120724177	120840593	789624	30	302,82,260,336,210,103,215,73,212,210,103,215,73,206,52,164,52,173,52,173,52,173,109,173,52,173,52,173,109,270,	0,39679,61025,69212,81607,83658,84596,85862,86398,87937,89942,90880,92136,92673,94174,98155,99360,100025,105815,106467,107349,108039,108926,109654,112568,113220,114102,114796,115683,116401,
#Partially deleted in new
chr1	120805417	120840619	chr1:120805417-120840619	1	+	120805590	120840593	789624	19	36,210,103,215,73,212,210,103,215,73,206,52,164,52,173,52,173,109,270,	0,138,2189,3127,4393,4929,6468,8473,9411,10667,11204,12705,16686,17891,24998,25880,26570,27457,34932,
#Partially deleted in new
chr1	120805417	120840619	chr1:120805417-120840619	1	+	120805590	120840593	789624	14	36,210,103,215,73,206,52,164,52,173,52,173,52,270,	0,138,2189,3127,4393,11204,12705,16686,17891,24998,25880,26570,29077,34932,
#Partially deleted in new
chr1	120805417	120840618	chr1:120805417-120840618	1	+	120805590	120833626	789624	20	36,155,53,215,73,212,210,103,215,73,206,52,52,173,52,173,52,173,109,269,	0,138,295,3127,4393,4929,6468,8473,9411,10667,11204,12705,17891,28185,29077,31751,32633,33327,34214,34932,
#Partially deleted in new
chr1	120805417	120840619	chr1:120805417-120840619	1	+	120811920	120833626	789624	15	167,181,103,215,73,206,52,52,173,52,173,52,173,109,270,	0,6497,8473,9411,10667,11204,12705,17891,28185,29077,31751,32633,33327,34214,34932,
#Partially deleted in new
chr1	120805417	120840619	chr1:120805417-120840619	1	+	120805590	120840593	789624	21	41,210,103,215,73,212,210,103,215,73,206,52,164,52,173,52,173,52,173,109,270,	0,138,2189,3127,4393,4929,6468,8473,9411,10667,11204,12705,16686,17891,18556,19448,24998,25880,26570,27457,34932,
#Partially deleted in new
chr1	120805417	120840627	chr1:120805417-120840627	1	+	120813922	120840593	789624	19	348,215,73,212,210,103,215,73,206,52,164,52,173,52,173,52,173,109,278,	0,3127,4393,4929,6468,8473,9411,10667,11204,12705,16686,17891,18556,31099,31751,32633,33327,34214,34932,
#Partially deleted in new
chr1	120813905	120841481	chr1:120813905-120841481	1	+	120813922	120840593	789624	22	88,215,73,206,52,164,52,173,52,173,52,173,109,173,52,173,52,173,52,173,109,1132,	0,923,2179,2716,4217,8198,9403,10068,10960,16510,17392,18082,18969,19697,20589,20724,22611,23263,24145,24839,25726,26444,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	120889745	120890405	chr1:120889745-120890405	3	+	120889820	120890315	789624	1	660,	0,
#Partially deleted in new
chr1	120913150	120914238	chr1:120913150-120914238	3	-	120913150	120913150	8553170	1	1088,	0,
#Partially deleted in new
chr1	120913183	120914238	chr1:120913183-120914238	0	-	120913183	120913183	8553170	1	1055,	0,
#Partially deleted in new
chr1	120913274	121009109	chr1:120913274-121009109	0	+	120913274	120913274	8553170	3	176,244,170,	0,93572,95665,
#Partially deleted in new
chr1	120913274	120953463	chr1:120913274-120953463	1	+	120913274	120913274	8553170	3	176,347,244,	0,39164,39945,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	120913327	121001622	chr1:120913327-121001622	1	+	120913327	120913327	8553170	2	123,623,	0,87672,
#Partially deleted in new
chr1	120913378	120953449	chr1:120913378-120953449	1	+	120913378	120913378	8553170	3	72,187,227,	0,39060,39844,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	120942599	120942763	chr1:120942599-120942763	3	+	120942599	120942599	789624	1	164,	0,
#Partially deleted in new
chr1	120963644	120973561	chr1:120963644-120973561	5	+	120963644	120963644	16724991	6	123,103,236,125,139,215,	0,2770,5474,9141,9463,9702,
#Partially deleted in new
chr1	120964000	120977585	chr1:120964000-120977585	7	+	120964000	120964000	16724991	6	178,103,236,52,168,133,	0,2414,5118,9346,10221,13452,
#Partially deleted in new
chr1	120985691	121052167	chr1:120985691-121052167	7	-	120985691	120985691	16724991	3	175,236,142,	0,51870,66334,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	121008361	121008507	chr1:121008361-121008507	3	-	121008361	121008361	8553170	1	146,	0,
#Partially deleted in new
chr1	121029591	121042572	chr1:121029591-121042572	5	-	121029591	121029591	16724991	5	135,223,188,236,215,	0,1464,5472,7970,12766,
#Deleted in new
chr1	121058947	121059353	chr1:121058947-121059353	7	-	121058947	121058947	16724991	1	406,	0,
#Partially deleted in new
chr1	121087344	121093021	chr1:121087344-121093021	0	+	121087344	121087344	8553170	3	81,1088,26,	0,476,5651,
#Partially deleted in new
chr1	121087344	121095642	chr1:121087344-121095642	1	+	121087394	121094786	789624	5	81,21,258,255,969,	0,476,1306,5651,7329,
#Partially deleted in new
chr1	121087344	121095642	chr1:121087344-121095642	3	+	121087394	121094786	789624	5	81,21,255,255,969,	0,476,1309,5651,7329,
#Partially deleted in new
chr1	121087351	121096310	chr1:121087351-121096310	1	+	121087394	121096152	789624	5	74,21,255,255,439,	0,469,1302,5644,8520,
#Partially deleted in new
chr1	121087357	121095934	chr1:121087357-121095934	0	+	121087394	121094786	789624	6	68,21,255,255,285,63,	0,463,1296,5638,7316,8514,
#Partially deleted in new
chr1	121087361	121093801	chr1:121087361-121093801	0	+	121087361	121087361	8553170	4	64,21,258,806,	0,459,1289,5634,
#Partially deleted in new
chr1	121087386	121095011	chr1:121087386-121095011	0	+	121087386	121087386	8553170	5	39,21,255,255,338,	0,434,1267,5609,7287,
#Partially deleted in new
chr1	121087394	121096155	chr1:121087394-121096155	1	+	121087394	121096152	789624	3	31,255,284,	0,5601,8477,
#Partially deleted in new
chr1	121087412	121096127	chr1:121087412-121096127	0	+	121087829	121096127	789624	5	13,21,226,255,256,	0,408,1270,5583,8459,
#Partially deleted in new
chr1	121087527	121116676	chr1:121087527-121116676	3	-	121087527	121087527	8553170	2	384,75,	0,29074,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	121090288	121097655	chr1:121090288-121097655	3	-	121090288	121090288	8553170	2	2480,1063,	0,6304,
#Deleted in new
chr1	121094904	121096090	chr1:121094904-121096090	0	+	121094904	121094904	8553170	2	117,219,	0,967,
#Partially deleted in new
chr1	121108209	121117257	chr1:121108209-121117257	7	-	121108209	121108209	16724991	2	360,392,	0,8656,
#Partially deleted in new
chr1	121116861	121117242	chr1:121116861-121117242	5	-	121116861	121116861	16724991	1	381,	0,
#Partially deleted in new
chr1	121118125	121146826	chr1:121118125-121146826	3	+	121118125	121118125	8553170	4	153,41,123,177,	0,1905,9984,28524,
#Partially deleted in new
chr1	121118194	121118610	chr1:121118194-121118610	7	-	121118194	121118194	16724991	1	416,	0,
#Deleted in new
chr1	121142050	121142438	chr1:121142050-121142438	7	-	121142050	121142050	16724991	1	388,	0,
#Partially deleted in new
chr1	121167645	121184340	chr1:121167645-121184340	3	-	121168740	121183489	789624	4	1190,125,78,1003,	0,9562,13625,15692,
#Partially deleted in new
chr1	121167719	121183911	chr1:121167719-121183911	1	-	121168740	121183489	789624	4	1116,125,78,454,	0,9488,13551,15738,
#Partially deleted in new
chr1	121168231	121184314	chr1:121168231-121184314	1	-	121168780	121183489	789624	3	604,78,977,	0,13039,15106,
#Partially deleted in new
chr1	121168584	121185539	chr1:121168584-121185539	1	-	121168740	121185469	789624	4	251,125,78,222,	0,8623,12686,16733,
#Partially deleted in new
chr1	121168734	121184292	chr1:121168734-121184292	1	-	121168740	121183402	789624	5	101,125,78,132,312,	0,8473,12536,14603,15246,
#Partially deleted in new
chr1	121177295	121184316	chr1:121177295-121184316	0	-	121177295	121177295	8553170	4	37,78,16,242,	0,3975,6042,6779,
#Deleted in new
chr1	121182922	121183398	chr1:121182922-121183398	0	-	121182922	121182922	8553170	1	476,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	121184809	121392822	chr1:121184809-121392822	3	+	121187446	121387855	789624	10	315,609,193,163,63,216,129,225,102,5189,	0,2095,99993,139668,180483,189161,190016,197891,201696,202824,
#Deleted in new
chr1	121184810	121187305	chr1:121184810-121187305	0	+	121184810	121184810	8553170	2	137,401,	0,2094,
#Deleted in new
chr1	121185367	121187361	chr1:121185367-121187361	0	+	121185367	121185367	8553170	2	85,457,	0,1537,
#Deleted in new
chr1	121185381	121187295	chr1:121185381-121187295	0	+	121185381	121185381	8553170	2	93,391,	0,1523,
#Partially deleted in new
chr1	121187101	121387966	chr1:121187101-121387966	1	+	121365328	121387855	789624	7	412,63,216,129,222,102,333,	0,178191,186869,187724,195602,199404,200532,
#Deleted in new
chr1	121314946	121315055	chr1:121314946-121315055	7	-	121314946	121314946	16724991	1	109,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	121360155	121397905	chr1:121360155-121397905	3	-	121360155	121360155	789624	4	2038,137,186,143,	0,2596,37325,37607,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	121396753	121463129	chr1:121396753-121463129	0	+	121396753	121396753	8553170	2	551,3111,	0,63265,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	121396959	121463429	chr1:121396959-121463429	3	+	121396959	121396959	8553170	4	345,167,83,3411,	0,661,31022,63059,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	121397477	121398806	chr1:121397477-121398806	0	-	121397477	121397477	8553170	3	189,77,142,	0,285,1187,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	121412718	121429274	chr1:121412718-121429274	0	+	121412718	121412718	8553170	4	34,149,101,245,	0,12345,15245,16311,
#Partially deleted in new
chr1	121494378	121510383	chr1:121494378-121510383	3	-	121494378	121494378	8553170	3	217,64,28,	0,15362,15977,
#Deleted in new
chr1	121502343	121503891	chr1:121502343-121503891	7	+	121502343	121502343	16724991	1	1548,	0,
#Deleted in new
chr1	121518365	121518829	chr1:121518365-121518829	3	-	121518365	121518365	8553170	1	464,	0,
#Partially deleted in new
chr1	121519111	121571892	chr1:121519111-121571892	5	+	121519111	121519111	16724991	8	348,187,89,128,277,34,55,3117,	0,37398,37819,43116,45525,46652,49035,49664,
#Partially deleted in new
chr1	121519131	121556674	chr1:121519131-121556674	4	+	121519131	121519131	16724991	3	328,98,165,	0,19191,37378,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	121519319	121575702	chr1:121519319-121575702	7	+	121519319	121519319	16724991	9	140,98,187,89,128,277,34,55,1412,	0,19003,37190,37611,42908,45317,46444,48827,54971,
#Partially deleted in new
chr1	121519344	121568791	chr1:121519344-121568791	5	+	121519344	121519344	16724991	8	115,187,89,128,277,34,55,16,	0,37165,37586,42883,45292,46419,48802,49431,
#Partially deleted in new
chr1	121573945	121580524	chr1:121573945-121580524	3	-	121573945	121573945	8553170	2	333,93,	0,6486,
#Deleted in new
chr1	143343179	143343275	chr1:143343179-143343275	7	+	143343179	143343179	16724991	1	96,	0,
#Partially deleted in new
chr1	143354190	143386122	chr1:143354190-143386122	7	+	143354190	143354190	16724991	5	429,133,126,948,171,	0,13396,18027,22615,31761,
#Deleted in new
chr1	143419624	143420207	chr1:143419624-143420207	7	-	143419624	143419624	16724991	2	78,135,	0,448,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	143439604	143439714	chr1:143439604-143439714	3	+	143439604	143439604	8553170	1	110,	0,
#Deleted in new
chr1	143449570	143450245	chr1:143449570-143450245	7	-	143449570	143449570	16724991	1	675,	0,
#Partially deleted in new
chr1	143461220	143498767	chr1:143461220-143498767	7	-	143461220	143461220	16724991	10	239,66,110,165,182,105,102,117,122,24,	0,1505,2078,3519,3939,9394,9691,15325,18209,37523,
#Deleted in new
chr1	143487771	143488353	chr1:143487771-143488353	7	+	143487771	143487771	16724991	1	582,	0,
#Deleted in new
chr1	143498784	143499102	chr1:143498784-143499102	7	+	143498784	143498784	16724991	1	318,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	143499186	143500512	chr1:143499186-143500512	3	-	143499186	143499186	8553170	3	189,77,142,	0,285,1184,
#Partially deleted in new
chr1	143541767	143572834	chr1:143541767-143572834	7	+	143541767	143541767	16724991	17	237,52,224,153,182,252,132,120,190,125,240,116,228,141,139,47,16,	0,1244,2383,3258,5576,9105,10575,11374,12985,13863,23534,25785,26469,27617,28848,29290,31051,
#Partially deleted in new
chr1	143595215	143635641	chr1:143595215-143635641	7	-	143595215	143595215	16724991	16	244,52,173,52,167,52,173,56,164,48,206,73,215,98,213,133,	0,845,1595,2374,3141,3904,4660,5469,6570,9927,11295,11962,13076,14136,16020,40293,
#Deleted in new
chr1	143619993	143620527	chr1:143619993-143620527	7	+	143619993	143619993	16724991	1	534,	0,
#Deleted in new
chr1	143652049	143652215	chr1:143652049-143652215	3	-	143652049	143652049	8553170	1	166,	0,
#Partially deleted in new
chr1	143720509	143720644	chr1:143720509-143720644	3	-	143720509	143720509	8553170	1	135,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	143736065	143739506	chr1:143736065-143739506	3	+	143736065	143736065	8553170	2	58,2617,	0,824,
#Partially deleted in new
chr1	143745248	143760669	chr1:143745248-143760669	7	+	143745248	143745248	16724991	6	178,103,236,51,168,133,	0,2422,5151,11183,12055,15288,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	143766539	143769083	chr1:143766539-143769083	7	+	143766539	143766539	16724991	1	2544,	0,
#Deleted in new
chr1	143784375	143784671	chr1:143784375-143784671	7	+	143784375	143784375	16724991	1	296,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	143790009	143797108	chr1:143790009-143797108	3	+	143790009	143790009	789624	2	254,4989,	0,2110,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	143791541	143791687	chr1:143791541-143791687	3	-	143791541	143791541	8553170	1	146,	0,
#Partially deleted in new
chr1	143811358	143825837	chr1:143811358-143825837	7	-	143811358	143811358	16724991	6	215,135,223,188,236,179,	0,1513,2976,6983,9478,14300,
#Deleted in new
chr1	143846096	143846504	chr1:143846096-143846504	7	-	143846096	143846096	16724991	1	408,	0,
#Partially deleted in new
chr1	143874792	143883575	chr1:143874792-143883575	7	+	143874792	143874792	16724991	6	31,21,255,255,284,281,	0,426,1259,5644,7320,8502,
#Partially deleted in new
chr1	143875170	143904650	chr1:143875170-143904650	7	-	143875170	143875170	16724991	2	139,424,	0,29056,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	143877730	143885076	chr1:143877730-143885076	3	-	143877730	143877730	8553170	2	2479,1061,	0,6285,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	143894543	143905793	chr1:143894543-143905793	3	-	143894543	143894543	8553170	3	1298,364,239,	0,9683,11011,
#Partially deleted in new
chr1	143904222	143904603	chr1:143904222-143904603	5	-	143904222	143904222	16724991	1	381,	0,
#Partially deleted in new
chr1	143904300	143905964	chr1:143904300-143905964	0	-	143904300	143904300	8553170	2	290,410,	0,1254,
#Partially deleted in new
chr1	143905486	143934776	chr1:143905486-143934776	3	+	143905486	143905486	8553170	4	153,41,123,177,	0,1899,9932,29113,
#Partially deleted in new
chr1	143905555	143905966	chr1:143905555-143905966	3	-	143905555	143905966	0	1	411,	0,
#Deleted in new
chr1	143929993	143930382	chr1:143929993-143930382	7	-	143929993	143929993	16724991	1	389,	0,
#Partially deleted in new
chr1	143955363	143971965	chr1:143955363-143971965	3	-	143956386	143971141	789624	4	1118,125,78,976,	0,9491,13560,15626,
#Partially deleted in new
chr1	143955877	143971965	chr1:143955877-143971965	1	-	143956426	143971141	789624	3	604,78,976,	0,13046,15112,
#Partially deleted in new
chr1	143975086	144068350	chr1:143975086-144068350	7	+	143975086	143975086	16724991	7	67,63,216,129,222,102,222,	0,70660,79351,80206,88086,91914,93042,
#Deleted in new
chr1	144085627	144086098	chr1:144085627-144086098	7	+	144085627	144085627	16724991	2	49,298,	0,173,
#Deleted in new
chr1	144168751	144168850	chr1:144168751-144168850	7	+	144168751	144168751	16724991	1	99,	0,
#Partially deleted in new
chr1	144179776	144211729	chr1:144179776-144211729	7	+	144179776	144179776	16724991	7	429,133,38,16,126,948,171,	0,13413,13842,16548,18043,22637,31782,
#Partially deleted in new
chr1	144227029	144250288	chr1:144227029-144250288	3	-	144227029	144227029	789624	3	350,135,64,	0,18656,23195,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	144245026	144245821	chr1:144245026-144245821	1	-	144245026	144245026	8553170	2	289,136,	0,659,
#Deleted in new
chr1	144245237	144250279	chr1:144245237-144250279	0	-	144245237	144245237	8553170	3	78,135,55,	0,448,4987,
#Deleted in new
chr1	144245685	144250288	chr1:144245685-144250288	0	-	144245685	144245685	8553170	2	135,64,	0,4539,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	144265216	144265326	chr1:144265216-144265326	3	+	144265216	144265216	8553170	1	110,	0,
#Deleted in new
chr1	144274891	144277993	chr1:144274891-144277993	7	-	144274891	144274891	16724991	2	1964,48,	0,3054,
#Partially deleted in new
chr1	144286846	144305180	chr1:144286846-144305180	5	-	144286846	144286846	16724991	9	229,65,110,165,182,105,102,117,122,	0,1496,2069,3520,3940,9397,9694,15328,18212,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	144372874	144373659	chr1:144372874-144373659	3	-	144373089	144373584	789624	1	785,	0,
#Deleted in new
chr1	144401068	144401355	chr1:144401068-144401355	7	-	144401068	144401068	16724991	1	287,	0,
#Deleted in new
chr1	144418112	144419192	chr1:144418112-144419192	3	-	144418112	144418112	8553170	2	258,56,	0,1024,
#Deleted in new
chr1	144418677	144419190	chr1:144418677-144419190	7	+	144418677	144418677	16724991	1	513,	0,
#Partially deleted in new
chr1	144421385	144456809	chr1:144421385-144456809	1	-	144423012	144440003	789624	21	1871,106,173,52,173,52,173,52,164,52,206,73,215,103,210,155,180,251,142,31,273,	0,2484,3304,4131,4892,5661,6432,7220,8314,12387,13725,14395,15509,16559,18443,18755,19016,21284,27389,29386,35151,
#Partially deleted in new
chr1	144421385	144456805	chr1:144421385-144456805	1	-	144423012	144440003	789624	19	1871,106,173,52,173,52,173,52,164,52,206,73,215,103,210,155,142,31,269,	0,2484,3304,4131,4892,5661,6432,7220,8314,12387,13725,14395,15509,16559,18443,18755,27389,29386,35151,
#Partially deleted in new
chr1	144421389	144461647	chr1:144421389-144461647	3	-	144423012	144440003	789624	20	1867,106,173,52,173,52,173,52,164,52,206,73,215,103,210,155,142,31,269,267,	0,2480,3300,4127,4888,5657,6428,7216,8310,12383,13721,14391,15505,16555,18439,18751,27385,29382,35147,39991,
#Partially deleted in new
chr1	144440208	144461591	chr1:144440208-144461591	0	-	144440208	144440208	8553170	4	87,142,269,211,	0,8566,16328,21172,
#Deleted in new
chr1	144442605	144443004	chr1:144442605-144443004	7	+	144442605	144442605	16724991	1	399,	0,
#Partially deleted in new
chr1	144448774	144461644	chr1:144448774-144461644	0	-	144448774	144448774	8553170	4	142,31,269,264,	0,1997,7762,12606,
#Partially deleted in new
chr1	144448825	144456761	chr1:144448825-144456761	0	-	144448825	144448825	8553170	3	91,99,225,	0,1946,7711,
#Partially deleted in new
chr1	144472534	144474790	chr1:144472534-144474790	7	-	144472534	144472534	16724991	2	27,237,	0,2019,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	144523859	144524021	chr1:144523859-144524021	3	-	144523859	144523859	8553170	1	162,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	144551778	144551943	chr1:144551778-144551943	3	-	144551778	144551778	789624	1	165,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	144592867	144593527	chr1:144592867-144593527	3	+	144592942	144593437	789624	1	660,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	144627191	144642058	chr1:144627191-144642058	3	-	144627191	144627191	8553170	6	46,77,18,119,183,90,	0,1345,2894,3552,14295,14777,
#Partially deleted in new
chr1	144632495	144642372	chr1:144632495-144642372	1	-	144632495	144632495	8553170	2	92,404,	0,9473,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	144641370	144919902	chr1:144641370-144919902	3	+	144641370	144641370	8553170	4	141,186,137,2038,	0,237,275799,276494,
#Partially deleted in new
chr1	144661199	144679513	chr1:144661199-144679513	7	+	144661199	144661199	16724991	9	120,117,102,105,182,165,110,65,212,	0,2887,8536,8830,14209,14646,16152,16770,18102,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	144701049	144701159	chr1:144701049-144701159	7	-	144701049	144701049	16724991	1	110,	0,
#Partially deleted in new
chr1	144754571	144786606	chr1:144754571-144786606	7	-	144754571	144754571	16724991	5	261,948,126,137,420,	0,8458,13876,18499,31615,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	144887264	145095528	chr1:144887264-145095528	1	-	144892159	145092901	789624	10	5117,102,222,129,216,63,163,193,609,306,	0,6143,9851,17826,18594,27427,68174,107743,205570,207958,
#Partially deleted in new
chr1	144892020	145095528	chr1:144892020-145095528	3	-	144892159	145092901	789624	10	361,102,225,129,216,63,163,193,609,306,	0,1387,5095,13070,13838,22671,63418,102987,200814,203202,
#Partially deleted in new
chr1	144892048	145093246	chr1:144892048-145093246	1	-	144892159	144914718	789624	7	333,102,222,129,216,63,412,	0,1359,5067,13042,13810,22643,200786,
#Partially deleted in new
chr1	144897235	144955446	chr1:144897235-144955446	0	-	144905979	144955446	789624	5	105,129,181,63,8,	0,7855,8623,17456,58203,
#Deleted in new
chr1	144965024	144965135	chr1:144965024-144965135	7	+	144965024	144965024	16724991	1	111,	0,
#Deleted in new
chr1	145092986	145094979	chr1:145092986-145094979	0	-	145092986	145092986	8553170	2	457,85,	0,1908,
#Deleted in new
chr1	145093042	145095526	chr1:145093042-145095526	0	-	145093042	145093042	8553170	2	401,136,	0,2348,
#Deleted in new
chr1	145093052	145094965	chr1:145093052-145094965	0	-	145093052	145093052	8553170	2	391,93,	0,1820,
#Partially deleted in new
chr1	145095999	145112696	chr1:145095999-145112696	3	+	145096847	145111597	789624	4	1000,78,125,1194,	0,2988,7007,15503,
#Partially deleted in new
chr1	145139985	145148375	chr1:145139985-145148375	7	+	145139985	145139985	16724991	5	208,52,188,103,135,	0,1304,2515,6607,8255,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	145164099	145167488	chr1:145164099-145167488	4	-	145164099	145164099	16724991	1	3389,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	145168404	145215850	chr1:145168404-145215850	4	-	145168404	145168404	16724991	3	682,244,212,	0,2537,47234,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	145168420	145215814	chr1:145168420-145215814	4	-	145168420	145168420	16724991	4	666,244,55,176,	0,2521,46256,47218,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	145169518	145169664	chr1:145169518-145169664	3	+	145169518	145169518	8553170	1	146,	0,
#Partially deleted in new
chr1	145200690	145215872	chr1:145200690-145215872	4	-	145200690	145200690	16724991	3	100,160,234,	0,451,14948,
#Partially deleted in new
chr1	145201187	145215746	chr1:145201187-145215746	4	-	145201187	145201187	16724991	3	114,55,108,	0,13489,14451,
#Deleted in new
chr1	145214676	145215726	chr1:145214676-145215726	5	-	145214676	145214676	16724991	2	55,88,	0,962,
#Deleted in new
chr1	145214850	145215938	chr1:145214850-145215938	3	+	145214850	145214850	8553170	1	1088,	0,
#Deleted in new
chr1	145214850	145215905	chr1:145214850-145215905	0	+	145214850	145214850	8553170	1	1055,	0,
#Deleted in new
chr1	145233000	145233519	chr1:145233000-145233519	7	+	145233000	145233000	16724991	1	519,	0,
#Deleted in new
chr1	145241629	145242124	chr1:145241629-145242124	3	-	145241629	145242124	789624	1	495,	0,
#Deleted in new
chr1	145269603	145269890	chr1:145269603-145269890	7	-	145269603	145269603	16724991	1	287,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	145281115	145281279	chr1:145281115-145281279	3	+	145281115	145281115	789624	1	164,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	145281115	145281462	chr1:145281115-145281462	3	+	145281115	145281115	8553170	1	347,	0,
#Deleted in new
chr1	145286609	145287755	chr1:145286609-145287755	3	-	145286609	145286609	8553170	2	261,120,	0,1026,
#Partially deleted in new
chr1	145289899	145405567	chr1:145289899-145405567	1	-	145291525	145405272	789624	138	1870,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,109,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,52,164,52,209,73,215,103,210,158,	0,2481,3304,4121,4882,5667,6438,7239,8062,8887,9648,10429,11200,12001,12824,13633,14394,15170,15993,16816,17577,18353,19176,19997,20758,21537,22308,23109,23932,24765,25526,26307,27078,27881,28704,29535,30296,31069,31840,32643,33466,34285,35046,35819,36590,37391,38214,39045,39806,40586,41357,42158,42981,43798,44559,45342,46113,46914,47737,48554,49315,50096,50867,51664,52487,53308,54069,54850,55621,56422,57245,58078,58839,59620,60391,61194,62017,62842,63603,64384,65155,65956,66779,67590,68351,69131,69902,70703,71526,72343,73104,73885,74656,75457,76280,77103,77864,78645,79416,80217,81040,81851,82612,83393,84164,84965,85788,86605,87366,88143,88914,89717,90540,91357,92118,92899,93670,94471,95294,96113,96874,97647,98418,99221,100044,100869,101630,102403,103174,103984,105078,109149,110486,111159,112267,113316,115198,115510,
#Partially deleted in new
chr1	145289899	145405778	chr1:145289899-145405778	3	-	145291525	145393729	789624	138	1870,109,173,52,173,52,173,109,173,52,173,52,93,80,52,173,109,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,13,75,164,52,206,73,215,103,210,97,	0,2481,3304,4121,4882,5667,6438,7239,8062,8887,9648,10429,11200,12917,13633,14394,15170,15993,16816,17577,18353,19176,19997,20758,21537,22308,23109,23932,24765,25526,26307,27078,27881,28704,29535,30296,31069,31840,32643,33466,34285,35046,35819,36590,37391,38214,39045,39806,40586,41357,42158,42981,43798,44559,45342,46113,46914,47737,48554,49315,50096,50867,51664,52487,53308,54069,54850,55621,56422,57245,58078,58839,59620,60391,61194,62017,62842,63603,64384,65155,65956,66779,67590,68351,69131,69902,70703,71526,72343,73104,73885,74656,75457,76280,77103,77864,78645,79416,80217,81040,81851,82612,83393,84164,84965,85788,86605,87366,88143,88914,89717,90540,91357,92118,92899,93670,94471,95294,96113,96874,97647,98418,99221,100044,100869,101630,102403,103174,103822,103961,105078,109149,110489,111159,112267,113316,115198,115782,
#Partially deleted in new
chr1	145290619	145403303	chr1:145290619-145403303	1	-	145291525	145403286	789624	22	1150,109,173,52,173,52,173,52,173,109,173,52,173,52,173,52,164,52,206,73,215,88,	0,6519,7342,8167,20038,25587,26358,30349,59671,60474,61297,62122,67631,77925,97698,103264,104358,108429,109769,110439,111547,112596,
#Partially deleted in new
chr1	145290638	145403303	chr1:145290638-145403303	1	-	145291525	145403286	789624	22	1131,109,173,52,173,52,173,52,173,109,173,52,173,52,173,52,164,52,206,73,215,88,	0,46175,46998,62103,62864,63645,64416,87404,88175,93732,94555,95374,96135,96908,97679,103245,104339,108410,109750,110420,111528,112577,
#Partially deleted in new
chr1	145291499	145405445	chr1:145291499-145405445	1	-	145388466	145405272	789624	14	270,109,173,52,173,52,173,52,52,206,73,215,103,348,	0,881,93694,94513,95274,96047,96818,102384,107549,108889,109559,110667,111716,113598,
#Deleted in new
chr1	145407771	145408173	chr1:145407771-145408173	7	+	145407771	145407771	16724991	1	402,	0,
#Deleted in new
chr1	145431526	145431693	chr1:145431526-145431693	3	-	145431526	145431526	8553170	1	167,	0,
#Deleted in new
chr1	145507443	145508607	chr1:145507443-145508607	7	+	145507443	145507443	16724991	2	156,114,	0,1050,
#Partially deleted in new
chr1	145509046	145520594	chr1:145509046-145520594	7	+	145509046	145509046	16724991	9	190,125,239,117,227,144,139,47,42,	0,879,4091,6282,6965,8123,9353,9798,11506,
#Partially deleted in new
chr1	145572344	145607858	chr1:145572344-145607858	7	-	145572344	145572344	16724991	20	589,1006,112,173,52,173,52,173,52,164,52,206,73,215,103,210,83,135,166,38,	0,858,2476,3302,4115,4876,5667,6438,7251,8345,12411,13746,14416,15542,16592,18541,21497,22106,29529,35476,
#Partially deleted in new
chr1	145573964	145591060	chr1:145573964-145591060	5	-	145573964	145573964	16724991	15	244,112,173,52,173,52,173,52,164,52,206,73,215,103,175,	0,856,1682,2495,3256,4047,4818,5631,6725,10791,12126,12796,13922,14972,16921,
#Partially deleted in new
chr1	145607989	145670648	chr1:145607989-145670648	3	+	145608133	145670040	789624	14	186,60,104,107,102,121,81,110,89,93,96,90,66,815,	0,8244,10330,15064,15623,22697,23674,35879,38194,39185,55339,57572,61635,61844,
#Partially deleted in new
chr1	145607989	145670463	chr1:145607989-145670463	0	+	145608133	145623654	789624	14	186,60,104,107,122,121,81,110,89,93,96,90,66,630,	0,8244,10330,15064,15603,22697,23674,35879,38194,39185,55339,57572,61635,61844,
#Partially deleted in new
chr1	145608018	145623224	chr1:145608018-145623224	0	+	145608018	145608018	8553170	4	157,60,104,171,	0,8215,10301,15035,
#Partially deleted in new
chr1	145608026	145647218	chr1:145608026-145647218	0	+	145608133	145623654	789624	9	149,60,104,107,122,81,110,89,44,	0,8207,10293,15027,15566,23637,35842,38157,39148,
#Partially deleted in new
chr1	145608032	145647236	chr1:145608032-145647236	0	+	145608133	145644001	789624	8	143,104,107,102,121,81,199,62,	0,10287,15021,15580,22654,23631,35836,39142,
#Partially deleted in new
chr1	145608047	145618351	chr1:145608047-145618351	0	+	145608133	145608473	789624	4	128,328,60,32,	0,300,8186,10272,
#Partially deleted in new
chr1	145608047	145670184	chr1:145608047-145670184	1	+	145616266	145670040	789624	15	128,46,60,104,107,102,121,81,110,89,93,96,90,66,351,	0,4154,8186,10272,15006,15565,22639,23616,35821,38136,39127,55281,57514,61577,61786,
#Partially deleted in new
chr1	145608612	145670178	chr1:145608612-145670178	1	+	145616266	145670040	789624	14	63,60,104,107,102,121,81,110,89,93,96,90,66,345,	0,7621,9707,14441,15000,22074,23051,35256,37571,38562,54716,56949,61012,61221,
#Partially deleted in new
chr1	145611465	145623714	chr1:145611465-145623714	0	+	145611465	145611465	8553170	5	124,60,125,107,122,	0,4768,6833,11588,12127,
#Partially deleted in new
chr1	145630686	145663419	chr1:145630686-145663419	0	+	145630686	145630686	8553170	7	121,81,110,97,69,93,91,	0,977,13182,14960,15517,16488,32642,
#Partially deleted in new
chr1	145630713	145645928	chr1:145630713-145645928	0	+	145630713	145630713	8553170	4	94,81,110,282,	0,950,13155,14933,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	145644085	145670460	chr1:145644085-145670460	0	+	145644085	145644085	8553170	7	1658,69,93,96,90,66,627,	0,2118,3089,19243,21476,25539,25748,
#Partially deleted in new
chr1	145646243	145670463	chr1:145646243-145670463	0	+	145646243	145646243	8553170	5	1024,96,90,66,630,	0,17085,19318,23381,23590,
#Partially deleted in new
chr1	145670851	145707400	chr1:145670851-145707400	3	-	145671435	145688021	0	9	638,291,225,197,196,137,250,212,84,	0,1878,2805,7597,10060,11648,15625,16960,36465,
#Partially deleted in new
chr1	145670851	145707400	chr1:145670851-145707400	1	-	145671435	145688021	0	7	638,291,225,197,250,212,84,	0,1878,2805,7597,15625,16960,36465,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	145670984	145691802	chr1:145670984-145691802	1	-	145671435	145688021	0	9	505,291,225,197,196,137,250,212,71,	0,1745,2672,7464,9927,11515,15492,16827,20747,
#Deleted in new
chr1	145670984	145672848	chr1:145670984-145672848	0	-	145670984	145670984	8553170	4	140,48,63,119,	0,232,442,1745,
#Deleted in new
chr1	145670985	145673756	chr1:145670985-145673756	0	-	145670985	145670985	8553170	4	139,48,291,100,	0,231,1744,2671,
#Deleted in new
chr1	145670986	145673710	chr1:145670986-145673710	0	-	145670986	145670986	8553170	6	138,48,63,48,291,54,	0,230,440,605,1743,2670,
#Partially deleted in new
chr1	145680911	145708148	chr1:145680911-145708148	0	-	145680911	145688021	789624	6	196,137,250,212,84,131,	0,1588,5565,6900,26405,27106,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	145719470	145739153	chr1:145719470-145739153	1	+	145728327	145736301	789624	3	89,142,3157,	0,8788,16526,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	145719519	145739153	chr1:145719519-145739153	3	+	145728327	145738493	789624	6	40,106,145,327,138,668,	0,5281,8736,11224,16477,18966,
#Partially deleted in new
chr1	145728243	145739288	chr1:145728243-145739288	1	+	145728327	145738493	789624	4	157,327,138,803,	0,2500,7753,10242,
#Partially deleted in new
chr1	145728327	145736301	chr1:145728327-145736301	1	+	145728327	145736301	789624	3	73,327,305,	0,2416,7669,
#Partially deleted in new
chr1	145728327	145738493	chr1:145728327-145738493	1	+	145728327	145738493	789624	3	73,138,8,	0,7669,10158,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	145738867	145824077	chr1:145738867-145824077	3	-	145746865	145823873	789624	9	8130,116,94,73,72,209,58,59,306,	0,9127,11539,12570,14110,32843,45671,50040,84904,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	145746388	145773843	chr1:145746388-145773843	0	-	145746388	145746388	8553170	6	609,116,94,73,72,2133,	0,1606,4018,5049,6589,25322,
#Partially deleted in new
chr1	145824087	145836854	chr1:145824087-145836854	0	+	145824087	145824087	8553170	10	282,167,39,104,186,89,105,93,81,40,	0,1669,2366,2518,2732,4661,9172,9402,12406,12727,
#Partially deleted in new
chr1	145824175	145842493	chr1:145824175-145842493	1	+	145825776	145842353	789624	12	194,167,256,186,89,105,93,81,52,61,151,155,	0,1581,2278,2644,4573,9084,9314,12318,12639,13360,13880,18163,
#Partially deleted in new
chr1	145824228	145842505	chr1:145824228-145842505	3	+	145825776	145842420	0	15	141,167,256,186,89,105,93,81,52,61,151,102,50,150,167,	0,1528,2225,2591,4520,9031,9261,12265,12586,13307,13827,15661,15887,16693,18110,
#Partially deleted in new
chr1	145824382	145833356	chr1:145824382-145833356	0	+	145824382	145824382	8553170	7	165,167,39,104,186,89,97,	0,1374,2071,2223,2437,4366,8877,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	145836536	145840407	chr1:145836536-145840407	0	+	145836536	145836536	8553170	5	38,52,61,151,518,	0,278,999,1519,3353,
#Deleted in new
chr1	145839514	145839991	chr1:145839514-145839991	0	+	145839514	145839514	8553170	2	270,102,	0,375,
#Partially deleted in new
chr1	145845628	145848953	chr1:145845628-145848953	3	+	145845640	145848479	0	8	204,184,26,93,99,137,153,577,	0,384,804,969,1621,1954,2483,2748,
#Partially deleted in new
chr1	145845632	145848261	chr1:145845632-145848261	0	+	145845632	145845632	8553170	6	200,184,258,99,137,150,	0,380,800,1617,1950,2479,
#Partially deleted in new
chr1	145845658	145847689	chr1:145845658-145847689	0	+	145845658	145845658	8553170	4	174,258,99,107,	0,774,1591,1924,
#Partially deleted in new
chr1	145845970	145848264	chr1:145845970-145848264	0	+	145845970	145845970	8553170	5	226,258,99,137,153,	0,462,1279,1612,2141,
#Partially deleted in new
chr1	145846104	145847697	chr1:145846104-145847697	0	+	145846104	145846104	8553170	4	95,80,99,115,	0,506,1145,1478,
#Partially deleted in new
chr1	145848521	145859045	chr1:145848521-145859045	1	-	145849445	145858990	789624	15	1191,38,134,169,134,161,74,106,135,91,51,85,79,234,79,	0,1710,1931,2249,2498,4982,5291,5936,6224,7214,7546,7825,8067,8251,10445,
#Partially deleted in new
chr1	145848521	145859080	chr1:145848521-145859080	3	-	145849445	145858990	0	14	1191,38,134,169,134,161,74,106,135,91,51,85,418,114,	0,1710,1931,2249,2498,4982,5291,5936,6224,7214,7546,7825,8067,10445,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	145848521	145851354	chr1:145848521-145851354	0	-	145848521	145848521	8553170	4	1748,134,169,335,	0,1931,2249,2498,
#Partially deleted in new
chr1	145848521	145854664	chr1:145848521-145854664	0	-	145848521	145848521	8553170	7	1191,38,134,169,134,161,852,	0,1710,1931,2249,2498,4982,5291,
#Deleted in new
chr1	145850586	145850645	chr1:145850586-145850645	3	-	145850586	145850586	5263520	1	59,	0,
#Partially deleted in new
chr1	145854405	145859779	chr1:145854405-145859779	0	-	145854405	145854405	8553170	6	475,91,51,85,418,115,	0,1330,1662,1941,2183,5259,
#Partially deleted in new
chr1	145854541	145859049	chr1:145854541-145859049	0	-	145854541	145854541	8553170	6	22,135,91,51,660,83,	0,204,1194,1526,1805,4425,
#Partially deleted in new
chr1	145854609	145859035	chr1:145854609-145859035	0	-	145854609	145854609	8553170	5	271,91,51,660,69,	0,1126,1458,1737,4357,
#Partially deleted in new
chr1	145854745	145859836	chr1:145854745-145859836	0	-	145854745	145857003	789624	6	135,91,51,85,418,172,	0,990,1322,1601,1843,4919,
#Deleted in new
chr1	145856760	145859745	chr1:145856760-145859745	0	-	145856760	145857344	789624	3	246,102,81,	0,554,2904,
#Partially deleted in new
chr1	145866559	145885845	chr1:145866559-145885845	3	-	145867329	145885758	789624	14	206,106,66,90,2004,38,185,107,71,58,65,89,131,126,	0,727,1431,1751,5422,7595,8262,9580,10009,10256,11408,11831,12698,19160,
#Partially deleted in new
chr1	145866559	145885866	chr1:145866559-145885866	1	-	145867329	145885758	789624	12	206,106,66,90,2004,38,185,107,71,58,21,141,	0,727,1431,1751,5422,7595,8262,9580,10009,10256,11408,19166,
#Partially deleted in new
chr1	145891207	145910189	chr1:145891207-145910189	3	-	145892797	145910014	789624	30	1656,114,96,114,81,114,85,90,77,93,142,86,114,143,167,131,204,144,149,145,74,166,151,149,128,115,92,110,112,227,	0,1953,2332,4072,4423,4775,5060,5561,5803,6039,6304,6607,6902,7728,7967,8849,9582,9927,10308,10669,11038,11246,11603,12844,13476,15186,15525,15833,16146,18755,
#Partially deleted in new
chr1	145891213	145910090	chr1:145891213-145910090	1	-	145892797	145910014	789624	26	1650,114,96,114,81,114,85,90,77,93,142,86,114,143,167,131,204,144,149,145,74,166,151,149,128,128,	0,1947,2326,4066,4417,4769,5054,5555,5797,6033,6298,6601,6896,7722,7961,8843,9576,9921,10302,10663,11032,11240,11597,12838,13470,18749,
#Deleted in new
chr1	145892846	145893483	chr1:145892846-145893483	3	+	145892846	145892846	8553170	2	94,314,	0,323,
#Partially deleted in new
chr1	145902453	145904126	chr1:145902453-145904126	0	-	145902453	145902453	8553170	2	508,75,	0,1598,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	145905757	145910111	chr1:145905757-145910111	0	-	145905757	145905757	8553170	4	1067,110,112,149,	0,1283,1596,4205,
#Partially deleted in new
chr1	145911349	145918837	chr1:145911349-145918837	3	-	145912160	145918688	789624	4	1217,202,116,205,	0,5467,6351,7283,
#Deleted in new
chr1	145911349	145912406	chr1:145911349-145912406	0	-	145912160	145912406	789624	2	386,281,	0,776,
#Partially deleted in new
chr1	145911350	145918529	chr1:145911350-145918529	1	-	145912160	145918445	789624	4	1216,202,116,98,	0,5466,6350,7081,
#Partially deleted in new
chr1	145917713	145926741	chr1:145917713-145926741	0	-	145917713	145917713	8553170	4	103,65,137,260,	0,8149,8327,8768,
#Partially deleted in new
chr1	145917780	145926618	chr1:145917780-145926618	0	-	145925881	145926618	789624	5	36,120,65,137,137,	0,1406,8082,8260,8701,
#Partially deleted in new
chr1	145917780	145926618	chr1:145917780-145926618	0	-	145925881	145926618	789624	5	36,65,65,137,137,	0,5728,8082,8260,8701,
#Partially deleted in new
chr1	145919012	145925314	chr1:145919012-145925314	7	+	145919012	145919012	16724991	3	888,211,500,	0,5142,5802,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	145919012	145920200	chr1:145919012-145920200	5	+	145919012	145919012	16724991	2	557,521,	0,667,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	145919189	145920918	chr1:145919189-145920918	4	+	145919189	145919189	16724991	3	230,221,585,	0,490,1144,
#Partially deleted in new
chr1	145919343	145925341	chr1:145919343-145925341	5	+	145919343	145919343	16724991	4	76,221,211,527,	0,336,4811,5471,
#Partially deleted in new
chr1	145919343	145925233	chr1:145919343-145925233	5	+	145919343	145919343	16724991	3	557,211,419,	0,4811,5471,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	145921555	145927536	chr1:145921555-145927536	3	-	145925881	145927426	0	6	4372,137,137,78,60,177,	0,4485,4926,5253,5462,5804,
#Partially deleted in new
chr1	145921631	145927447	chr1:145921631-145927447	1	-	145925881	145927426	0	7	202,49,137,137,78,60,88,	0,4247,4409,4850,5177,5386,5728,
#Deleted in new
chr1	145925641	145927460	chr1:145925641-145927460	1	-	145925881	145927426	0	6	286,137,137,75,60,101,	0,399,840,1167,1376,1718,
#Deleted in new
chr1	145926145	145927495	chr1:145926145-145927495	0	-	145926145	145926145	8553170	3	32,596,136,	0,336,1214,
#Deleted in new
chr1	145926481	145927495	chr1:145926481-145927495	0	-	145926481	145926481	8553170	3	137,269,136,	0,327,878,
#Deleted in new
chr1	145926589	145927493	chr1:145926589-145927493	0	+	145926589	145926589	8553170	2	97,430,	0,474,
#Deleted in new
chr1	145926773	145927736	chr1:145926773-145927736	1	+	145926773	145926773	8553170	2	173,673,	0,290,
#Deleted in new
chr1	145926816	145927678	chr1:145926816-145927678	0	-	145926816	145926816	8553170	3	261,123,80,	0,543,782,
#Partially deleted in new
chr1	145926874	145941203	chr1:145926874-145941203	3	+	145926874	145926874	789624	3	72,406,92,	0,189,14237,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	145927235	145944626	chr1:145927235-145944626	0	+	145927235	145927235	8553170	4	422,108,116,92,	0,10121,13876,17299,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	145927235	145948823	chr1:145927235-145948823	0	+	145927235	145927235	8553170	5	234,116,92,265,39,	0,13876,17299,19861,21549,
#Partially deleted in new
chr1	145927235	145950335	chr1:145927235-145950335	0	+	145927235	145927235	8553170	3	559,92,147,	0,17299,22953,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	145927235	145949052	chr1:145927235-145949052	0	+	145927235	145927235	8553170	3	559,92,268,	0,17299,21549,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	145927235	145941206	chr1:145927235-145941206	0	+	145927235	145927235	8553170	4	234,76,138,95,	0,4848,7017,13876,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	145927235	145949043	chr1:145927235-145949043	0	+	145927235	145927235	8553170	5	234,116,92,49,259,	0,13876,17299,19861,21549,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	145927235	145941206	chr1:145927235-145941206	0	+	145927235	145927235	8553170	3	422,243,95,	0,12588,13876,
#Partially deleted in new
chr1	145927235	145959106	chr1:145927235-145959106	0	+	145927235	145927235	8553170	4	422,92,78,100,	0,17299,31125,31771,
#Partially deleted in new
chr1	145927235	145941194	chr1:145927235-145941194	0	+	145927235	145927235	8553170	3	559,198,83,	0,9155,13876,
#Partially deleted in new
chr1	145927235	145959179	chr1:145927235-145959179	0	+	145927235	145927235	8553170	3	559,92,173,	0,17299,31771,
#Partially deleted in new
chr1	145927257	145977811	chr1:145927257-145977811	3	+	145977112	145977811	789624	4	32,69,57,34,	0,49826,50225,50520,
#Partially deleted in new
chr1	145927257	145975402	chr1:145927257-145975402	0	+	145927257	145927257	8553170	6	537,78,98,60,66,96,	0,31103,31749,47567,47668,48049,
#Partially deleted in new
chr1	145927602	145941206	chr1:145927602-145941206	1	+	145927602	145927602	8553170	2	192,95,	0,13509,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	145933422	145958001	chr1:145933422-145958001	3	-	145936309	145957927	789624	6	3130,78,96,141,164,366,	0,3485,4181,9290,14196,24213,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	145941127	145948814	chr1:145941127-145948814	1	+	145941127	145941127	8553170	3	100,92,30,	0,3407,7657,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	145941195	145942249	chr1:145941195-145942249	1	+	145941195	145941195	8553170	2	32,345,	0,709,
#Deleted in new
chr1	145959441	145964582	chr1:145959441-145964582	3	-	145960268	145961759	789624	4	2438,548,228,399,	0,2979,3868,4742,
#Deleted in new
chr1	145961387	145964422	chr1:145961387-145964422	3	+	145961387	145961387	8553170	2	186,48,	0,2987,
#Deleted in new
chr1	145961403	145962596	chr1:145961403-145962596	0	-	145961403	145961759	789624	3	476,64,176,	0,851,1017,
#Deleted in new
chr1	145961448	145962955	chr1:145961448-145962955	0	-	145961448	145961759	789624	2	431,140,	0,1367,
#Partially deleted in new
chr1	145964701	145978848	chr1:145964701-145978848	0	+	145964701	145964701	8553170	3	67,167,1366,	0,10123,12781,
#Partially deleted in new
chr1	145964702	145978570	chr1:145964702-145978570	1	+	145974865	145978447	789624	7	66,167,130,57,74,114,210,	0,10122,10604,12780,13075,13280,13658,
#Partially deleted in new
chr1	145964702	145978848	chr1:145964702-145978848	3	+	145974865	145978447	0	8	66,167,130,69,57,74,114,488,	0,10122,10604,12381,12780,13075,13280,13658,
#Partially deleted in new
chr1	145964715	145978519	chr1:145964715-145978519	0	+	145964715	145964715	8553170	5	53,167,57,319,159,	0,10109,12767,13062,13645,
#Partially deleted in new
chr1	145992434	145996600	chr1:145992434-145996600	3	-	145993850	145996266	0	8	1452,152,157,257,103,148,73,584,	0,1581,1846,2109,2494,2709,2969,3582,
#Partially deleted in new
chr1	145993520	145995254	chr1:145993520-145995254	0	-	145993520	145993520	8553170	3	647,751,111,	0,760,1623,
#Partially deleted in new
chr1	145993578	145994216	chr1:145993578-145994216	0	-	145993578	145993578	8553170	2	308,201,	0,437,
#Partially deleted in new
chr1	145993838	145995763	chr1:145993838-145995763	1	-	145993850	145995561	0	7	48,152,157,257,103,148,360,	0,177,442,705,1090,1305,1565,
#Partially deleted in new
chr1	146017467	146021841	chr1:146017467-146021841	3	-	146018076	146020231	0	4	1233,560,186,255,	0,1707,2667,4119,
#Partially deleted in new
chr1	146017467	146021734	chr1:146017467-146021734	1	-	146018076	146018679	0	2	1233,148,	0,4119,
#Partially deleted in new
chr1	146017467	146021735	chr1:146017467-146021735	1	-	146018076	146018679	0	3	1233,37,149,	0,2230,4119,
#Partially deleted in new
chr1	146017469	146021918	chr1:146017469-146021918	1	-	146018076	146019492	0	3	1231,560,332,	0,1705,4117,
#Partially deleted in new
chr1	146017546	146036746	chr1:146017546-146036746	1	-	146018076	146018679	0	3	1154,37,89,	0,2151,19111,
#Partially deleted in new
chr1	146018566	146021735	chr1:146018566-146021735	1	-	146018621	146020231	789624	4	134,37,186,149,	0,1131,1568,3020,
#Partially deleted in new
chr1	146019551	146021735	chr1:146019551-146021735	0	-	146019551	146020231	789624	3	183,204,149,	0,583,2035,
#Partially deleted in new
chr1	146052565	146059356	chr1:146052565-146059356	0	+	146052565	146052565	8553170	3	383,149,361,	0,5747,6430,
#Partially deleted in new
chr1	146052602	146061948	chr1:146052602-146061948	3	+	146052602	146052602	8553170	4	346,149,1105,454,	0,5710,5955,8892,
#Partially deleted in new
chr1	146052621	146061705	chr1:146052621-146061705	0	+	146052621	146052621	8553170	2	327,211,	0,8873,
#Partially deleted in new
chr1	146052637	146058678	chr1:146052637-146058678	0	+	146052637	146052637	789624	4	311,295,149,121,	0,5056,5675,5920,
#Deleted in new
chr1	146057232	146058838	chr1:146057232-146058838	0	+	146057232	146057232	8553170	3	72,295,281,	0,461,1325,
#Partially deleted in new
chr1	146057693	146061706	chr1:146057693-146061706	0	+	146057693	146057693	8553170	3	295,149,212,	0,619,3801,
#Partially deleted in new
chr1	146064698	146144804	chr1:146064698-146144804	3	-	146066317	146144769	789624	90	1863,109,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,52,164,52,206,73,215,103,210,212,73,215,103,210,	0,2481,3304,4073,4844,5625,6448,7269,8030,8801,9572,10347,11170,12007,12768,13537,14308,15083,15906,16737,17498,18267,19038,19819,20642,21465,22225,22994,23765,24540,25363,26182,26943,27712,28483,29258,30081,30904,31665,32434,33205,33980,34803,35626,36387,37156,37927,38702,39525,40344,41105,41874,42645,43420,44243,45052,45813,46582,47355,48130,48953,49770,50531,51300,52073,52848,53671,54496,55257,56026,56799,57584,58407,59228,59989,60766,61537,62329,63420,67487,68824,69494,70608,71654,73537,75110,75785,76905,77951,79896,
#Partially deleted in new
chr1	146066317	146144804	chr1:146066317-146144804	1	-	146066317	146088470	789624	91	244,109,173,52,173,109,173,52,173,52,234,146,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,52,164,52,206,73,215,103,210,212,73,215,103,210,	0,862,1685,2454,3225,4006,4829,5650,6411,7182,7953,8254,8728,9551,10388,11149,11918,12689,13464,14287,15118,15879,16648,17419,18200,19023,19846,20606,21375,22146,22921,23744,24563,25324,26093,26864,27639,28462,29285,30046,30815,31586,32361,33184,34007,34768,35537,36308,37083,37906,38725,39486,40255,41026,41801,42624,43433,44194,44963,45736,46511,47334,48151,48912,49681,50454,51229,52052,52877,53638,54407,55180,55965,56788,57609,58370,59147,59918,60710,61801,65868,67205,67875,68989,70035,71918,73491,74166,75286,76332,78277,
#Partially deleted in new
chr1	146113651	146229000	chr1:146113651-146229000	3	-	146144978	146189337	789624	21	173,52,173,52,164,52,206,73,215,103,210,212,73,215,103,210,155,336,260,82,292,	0,817,7846,13376,14467,18534,19871,20541,21655,22701,24584,26157,26832,27952,28998,30943,31255,42828,51099,75648,115057,
#Deleted in new
chr1	146146202	146147754	chr1:146146202-146147754	0	-	146146202	146146202	8553170	3	118,70,90,	0,1123,1462,
#Partially deleted in new
chr1	146146520	146229026	chr1:146146520-146229026	1	-	146147688	146189337	789624	6	875,83,336,260,82,318,	0,1144,9959,18230,42779,82188,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	146152265	146213571	chr1:146152265-146213571	1	-	146156152	146189337	789624	6	3964,336,260,82,296,104,	0,4214,12485,37034,58568,61202,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	146155351	146229026	chr1:146155351-146229026	3	-	146156152	146189337	789624	5	878,336,260,82,318,	0,1128,9399,33948,73357,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	146235805	146237807	chr1:146235805-146237807	3	+	146235805	146235805	8553170	1	2002,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	146288595	146288696	chr1:146288595-146288696	3	+	146288595	146288595	8553170	1	101,	0,
#Deleted in new
chr1	146298169	146298715	chr1:146298169-146298715	7	+	146298169	146298169	16724991	1	546,	0,
#Partially deleted in new
chr1	146321213	146401647	chr1:146321213-146401647	7	-	146321213	146321213	16724991	5	783,147,161,225,150,	0,4010,6837,56149,80284,
#Partially deleted in new
chr1	146321841	146328211	chr1:146321841-146328211	5	-	146321841	146321841	16724991	3	155,147,161,	0,3382,6209,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	146344130	146344790	chr1:146344130-146344790	3	-	146344220	146344715	789624	1	660,	0,
#Deleted in new
chr1	146409902	146410062	chr1:146409902-146410062	3	+	146409902	146409902	8553170	1	160,	0,
#Deleted in new
chr1	146459448	146461859	chr1:146459448-146461859	7	+	146459448	146459448	16724991	2	237,214,	0,2197,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	146472565	146525291	chr1:146472565-146525291	5	+	146472565	146472565	16724991	6	98,246,122,82,194,564,	0,5740,32175,32765,43687,52162,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	146516246	146573981	chr1:146516246-146573981	4	+	146516246	146516246	16724991	8	200,122,69,100,323,200,125,149,	0,8481,11443,17038,20851,31122,41097,57586,
#Partially deleted in new
chr1	146526906	146641639	chr1:146526906-146641639	4	+	146526906	146526906	16724991	12	852,100,323,200,125,202,184,100,119,224,68,179,	0,6378,10191,20462,30437,46926,54142,68165,90122,95536,104102,114554,
#Deleted in new
chr1	146539540	146539663	chr1:146539540-146539663	3	-	146539540	146539540	8553170	1	123,	0,
#Partially deleted in new
chr1	146547366	146898974	chr1:146547366-146898974	7	+	146547366	146547366	16724991	79	202,125,202,184,100,119,224,68,236,101,136,165,153,239,274,144,144,314,141,79,120,210,138,178,128,134,137,128,192,150,240,169,180,174,174,215,79,184,142,248,612,219,209,183,120,160,173,199,100,100,169,239,118,205,236,152,190,103,288,143,219,161,98,207,213,139,166,148,208,222,170,199,159,278,220,213,164,151,231,	0,9977,26466,33682,47705,69662,75076,83642,94094,96207,98758,101265,102932,131642,135699,138370,143592,145463,177764,178578,181471,181850,184666,188428,190968,194738,195337,195707,195987,196515,199243,205167,207923,210241,214515,217462,224090,226164,229228,231875,246716,249493,259064,259491,260434,263836,264103,266991,272123,273655,275681,276326,278505,284062,285291,288438,288708,293282,293609,296015,299403,301858,304992,305919,307272,307967,310303,312898,317520,318227,327954,330296,332351,333934,335032,338287,339689,340707,351377,
#Partially deleted in new
chr1	146743159	146779280	chr1:146743159-146779280	4	+	146743159	146743159	16724991	11	42,192,150,240,169,180,174,174,184,142,39,	0,194,722,3450,9374,12130,14448,18722,30371,33435,36082,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	146862728	146862845	chr1:146862728-146862845	3	-	146862728	146862728	8553170	1	117,	0,
#Partially deleted in new
chr1	146898824	146900206	chr1:146898824-146900206	4	+	146898824	146898824	16724991	2	150,379,	0,1003,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	146898941	146914294	chr1:146898941-146914294	5	+	146898941	146898941	16724991	3	33,152,369,	0,11731,14984,
#Partially deleted in new
chr1	146938743	146996202	chr1:146938743-146996202	3	+	146960143	146994575	789624	36	239,272,142,224,148,210,103,215,73,212,210,103,215,73,212,210,103,215,73,206,52,164,52,173,52,173,52,173,109,173,52,173,52,173,109,1871,	0,4547,12604,13070,21115,21365,23417,24351,25613,26149,27720,29704,30638,31903,32439,34007,35995,36933,38185,38722,40215,44184,45390,46069,46961,47608,48490,49210,50097,50830,51722,52369,53251,53968,54855,55588,
#Partially deleted in new
chr1	146949313	146996093	chr1:146949313-146996093	1	+	146960143	146994575	789624	28	109,142,148,210,103,215,73,212,210,103,215,73,212,210,103,215,73,206,52,164,52,173,52,173,52,173,109,1762,	0,2034,10545,10795,12847,13781,15043,15579,17150,19134,20068,21333,21869,23437,25425,26363,27615,28152,29645,33614,34820,35499,36391,37038,37920,38640,39527,45018,
#Partially deleted in new
chr1	146949313	146996093	chr1:146949313-146996093	1	+	146960143	146994575	789624	34	109,142,148,210,103,215,73,212,210,103,215,73,212,210,103,215,73,206,52,164,52,173,52,173,52,173,109,173,52,173,52,173,109,1762,	0,2034,10545,10795,12847,13781,15043,15579,17150,19134,20068,21333,21869,23437,25425,26363,27615,28152,29645,33614,34820,35499,36391,37038,37920,38640,39527,40260,41152,41799,42681,43398,44285,45018,
#Deleted in new
chr1	146957116	146957659	chr1:146957116-146957659	7	-	146957116	146957116	16724991	1	543,	0,
#Partially deleted in new
chr1	146959858	146996197	chr1:146959858-146996197	1	+	146960143	146994348	789624	23	148,210,103,215,73,96,116,210,103,215,73,206,52,164,52,173,52,173,52,55,114,109,1866,	0,250,2302,3236,4498,5034,11420,12892,14880,15818,17070,17607,19100,23069,24275,24954,25846,26493,27375,28095,28154,28982,34473,
#Partially deleted in new
chr1	146959970	146994601	chr1:146959970-146994601	1	+	146960143	146994575	789624	14	36,210,103,215,73,206,52,164,52,173,52,173,52,270,	0,138,8477,9411,10676,17495,18988,22957,24163,26381,27263,27983,30495,34361,
#Partially deleted in new
chr1	146959970	146996198	chr1:146959970-146996198	1	+	146960143	146994575	789624	25	41,210,103,215,73,212,210,103,215,73,206,52,164,52,173,52,173,52,173,109,173,52,173,109,1867,	0,138,2190,3124,4386,4922,6493,8477,9411,16958,17495,18988,22957,24163,24842,25734,26381,27263,27983,28870,31142,32024,32741,33628,34361,
#Partially deleted in new
chr1	146959970	146994601	chr1:146959970-146994601	1	+	146966498	146994575	789624	19	36,210,103,215,73,212,210,103,215,73,206,52,164,52,173,52,173,109,270,	0,6493,8477,9411,10676,11212,12780,14768,15706,16958,17495,18988,22957,24163,26381,27263,27983,28870,34361,
#Partially deleted in new
chr1	146959970	146994601	chr1:146959970-146994601	1	+	146960143	146984836	789624	15	254,94,103,215,73,206,52,52,173,52,173,52,173,109,270,	0,6609,8477,9411,16958,17495,18988,24163,24842,25734,26381,27263,27983,28870,34361,
#Deleted in new
chr1	147001930	147003618	chr1:147001930-147003618	3	-	147001930	147001930	8553170	3	402,295,38,	0,966,1650,
#Deleted in new
chr1	147002281	147003184	chr1:147002281-147003184	0	-	147002281	147002281	8553170	3	51,149,288,	0,147,615,
#Partially deleted in new
chr1	147019655	147056593	chr1:147019655-147056593	7	-	147019655	147019655	16724991	15	39,45,138,144,225,117,87,129,113,136,75,90,81,169,195,	0,1703,2056,3280,4357,5153,11396,21740,23296,24707,25087,28478,35639,35886,36743,
#Deleted in new
chr1	147050816	147052481	chr1:147050816-147052481	7	+	147050816	147050816	16724991	1	1665,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	147079745	147079870	chr1:147079745-147079870	3	+	147079745	147079745	8553170	1	125,	0,
#Deleted in new
chr1	147082337	147083578	chr1:147082337-147083578	7	-	147082337	147082337	16724991	1	1241,	0,
#Partially deleted in new
chr1	147099481	147124285	chr1:147099481-147124285	7	-	147099481	147099481	16724991	13	412,214,173,52,171,52,164,52,212,73,199,103,213,	0,1974,10380,11314,13960,14738,15832,16786,18105,19470,20604,21591,24591,
#Partially deleted in new
chr1	147155105	147172544	chr1:147155105-147172544	3	-	147159564	147172144	0	8	4537,69,134,121,94,167,179,116,	0,6606,7334,11392,11740,12661,16883,17323,
#Deleted in new
chr1	147159218	147162510	chr1:147159218-147162510	0	-	147159218	147159218	8553170	4	424,37,69,71,	0,1578,2493,3221,
#Partially deleted in new
chr1	147162511	147172550	chr1:147162511-147172550	0	-	147162511	147162511	8553170	5	62,121,94,179,122,	0,3986,4334,9477,9917,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	147172743	147179126	chr1:147172743-147179126	7	+	147172743	147172743	16724991	3	816,162,1234,	0,1680,5149,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	147172770	147175205	chr1:147172770-147175205	4	+	147172770	147172770	16724991	2	789,782,	0,1653,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	147173185	147252659	chr1:147173185-147252659	3	+	147173185	147173185	8553170	3	374,162,37,	0,1238,79437,
#Partially deleted in new
chr1	147173384	147210075	chr1:147173384-147210075	1	+	147173384	147173384	8553170	3	175,83,454,	0,1118,36237,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	147175350	147243050	chr1:147175350-147243050	0	-	147201336	147225029	789624	9	1040,73,192,200,143,163,189,172,238,	0,14826,25801,33501,37042,37957,40403,49544,67462,
#Deleted in new
chr1	147178112	147179622	chr1:147178112-147179622	5	+	147178112	147178112	16724991	1	1510,	0,
#Partially deleted in new
chr1	147184304	147225353	chr1:147184304-147225353	1	-	147184491	147225029	789624	9	326,73,353,200,143,163,189,172,77,	0,5872,16847,24547,28088,29003,31449,40590,40972,
#Partially deleted in new
chr1	147184491	147225638	chr1:147184491-147225638	1	-	147184491	147225029	789624	9	139,73,353,200,143,163,189,172,352,	0,5685,16660,24360,27901,28816,31262,40403,40795,
#Partially deleted in new
chr1	147186258	147225638	chr1:147186258-147225638	3	-	147186899	147225029	789624	9	987,73,353,200,143,163,189,172,352,	0,3918,14893,22593,26134,27049,29495,38636,39028,
#Partially deleted in new
chr1	147186260	147225309	chr1:147186260-147225309	1	-	147190221	147225029	789624	7	985,73,200,143,163,189,415,	0,3916,22591,26132,27047,29493,38634,
#Deleted in new
chr1	147203275	147204932	chr1:147203275-147204932	7	-	147203275	147203275	16724991	1	1657,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	147208438	147225628	chr1:147208438-147225628	0	-	147208438	147208438	8553170	5	613,143,163,189,734,	0,3954,4869,7315,16456,
#Partially deleted in new
chr1	147212446	147225631	chr1:147212446-147225631	0	-	147212446	147225029	789624	5	89,163,189,172,58,	0,861,3307,12448,13127,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	147213358	147225873	chr1:147213358-147225873	0	-	147213358	147225029	789624	4	112,189,172,145,	0,2395,11536,12370,
#Partially deleted in new
chr1	147214781	147225339	chr1:147214781-147225339	0	-	147214781	147214781	8553170	2	1161,445,	0,10113,
#Deleted in new
chr1	147223553	147224348	chr1:147223553-147224348	7	+	147223553	147223553	16724991	1	795,	0,
#Partially deleted in new
chr1	147242640	147295766	chr1:147242640-147295766	1	+	147266035	147295509	789624	18	190,82,156,93,97,74,111,115,154,166,149,164,203,99,71,115,109,336,	0,17196,23291,24785,26141,28291,29530,32713,33463,37385,41710,42683,43657,44994,48841,50967,51768,52790,
#Partially deleted in new
chr1	147242640	147295766	chr1:147242640-147295766	1	+	147252688	147295509	789624	22	190,113,115,32,82,163,156,93,97,74,111,115,154,166,149,164,203,99,71,115,109,336,	0,9982,13172,13890,17196,21781,23291,24785,26141,28291,29530,32713,33463,37385,41710,42683,43657,44994,48841,50967,51768,52790,
#Partially deleted in new
chr1	147242683	147295762	chr1:147242683-147295762	3	+	147242703	147295509	789624	23	147,113,107,115,32,82,163,156,93,97,74,111,115,154,166,149,164,203,99,71,115,109,332,	0,9939,12186,13129,13847,17153,21738,23248,24742,26098,28248,29487,32670,33420,37342,41667,42640,43614,44951,48798,50924,51725,52747,
#Partially deleted in new
chr1	147242683	147295765	chr1:147242683-147295765	1	+	147242703	147295509	789624	17	147,156,93,97,74,111,115,154,166,149,164,203,99,71,115,109,335,	0,23248,24742,26098,28248,29487,32670,33420,37342,41667,42640,43614,44951,48798,50924,51725,52747,
#Partially deleted in new
chr1	147242683	147295762	chr1:147242683-147295762	0	+	147242703	147275402	789624	21	147,113,107,115,32,82,163,156,93,97,115,154,166,149,164,203,99,71,115,109,332,	0,9939,12186,13129,13847,17153,21738,23248,24742,26098,32670,33420,37342,41667,42640,43614,44951,48798,50924,51725,52747,
#Partially deleted in new
chr1	147242683	147295760	chr1:147242683-147295760	0	+	147242703	147254906	789624	23	147,113,79,115,32,82,167,152,93,97,74,111,115,154,166,149,164,203,99,71,115,109,330,	0,9939,12214,13129,13847,17153,21738,23252,24742,26098,28248,29487,32670,33420,37342,41667,42640,43614,44951,48798,50924,51725,52747,
#Partially deleted in new
chr1	147242703	147295760	chr1:147242703-147295760	0	+	147242703	147259880	789624	18	127,82,156,93,97,74,111,115,154,166,149,164,203,99,71,115,109,330,	0,17133,23228,24722,26078,28228,29467,32650,33400,37322,41647,42620,43594,44931,48778,50904,51705,52727,
#Partially deleted in new
chr1	147242718	147271010	chr1:147242718-147271010	1	+	147242816	147265970	789624	15	112,34,78,78,27,33,81,32,82,111,51,156,93,97,79,	0,9904,9939,12151,12231,13094,13128,13812,17118,21703,21815,23213,24707,26063,28213,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	147242745	147260046	chr1:147242745-147260046	0	+	147242745	147242745	8553170	6	85,113,107,115,32,210,	0,9877,12124,13067,13785,17091,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	147258884	147517875	chr1:147258884-147517875	3	-	147258884	147258884	8553170	6	2092,196,100,111,156,433,	0,125783,149705,255453,256636,258558,
#Partially deleted in new
chr1	147270903	147275409	chr1:147270903-147275409	0	+	147270903	147270903	8553170	3	210,111,56,	0,1267,4450,
#Partially deleted in new
chr1	147270994	147276247	chr1:147270994-147276247	0	+	147270994	147270994	8553170	5	11,111,94,63,144,	0,1176,1387,4411,5109,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	147319109	147320224	chr1:147319109-147320224	7	+	147319109	147319109	16724991	2	712,248,	0,867,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	147382191	147517875	chr1:147382191-147517875	1	-	147382191	147382191	789624	4	2672,111,156,433,	0,132146,133329,135251,
#Deleted in new
chr1	147419052	147419900	chr1:147419052-147419900	7	+	147419052	147419052	16724991	1	848,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	147420198	147420300	chr1:147420198-147420300	3	-	147420198	147420198	8553170	1	102,	0,
#Deleted in new
chr1	147445578	147446133	chr1:147445578-147446133	7	+	147445578	147445578	16724991	1	555,	0,
#Deleted in new
chr1	147482237	147482628	chr1:147482237-147482628	7	+	147482237	147482237	16724991	1	391,	0,
#Partially deleted in new
chr1	147541411	147626216	chr1:147541411-147626216	3	+	147611836	147624959	0	10	263,135,83,312,317,190,100,2242,261,2375,	0,63365,65372,70166,71471,73015,74391,77404,80859,82430,
#Partially deleted in new
chr1	147600195	147611693	chr1:147600195-147611693	0	+	147600195	147600195	8553170	4	142,135,83,116,	0,4581,6588,11382,
#Partially deleted in new
chr1	147611612	147615902	chr1:147611612-147615902	0	+	147611612	147611612	8553170	4	277,95,190,100,	0,1270,2814,4190,
#Partially deleted in new
chr1	147629651	147659001	chr1:147629651-147659001	0	-	147631052	147659001	789624	6	1414,96,101,133,88,42,	0,20491,22797,24542,25509,29308,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	147642234	147670496	chr1:147642234-147670496	3	-	147647422	147670048	0	10	5332,166,96,101,133,88,80,131,129,667,	0,6011,7908,10214,11959,12926,16725,17161,17412,27595,
#Partially deleted in new
chr1	147647367	147650682	chr1:147647367-147650682	0	-	147647367	147647367	8553170	3	199,166,540,	0,878,2775,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	147647367	147670283	chr1:147647367-147670283	0	-	147647367	147647367	789624	8	1044,2505,133,88,80,131,129,454,	0,2775,6826,7793,11592,12028,12279,22462,
#Partially deleted in new
chr1	147649816	147670048	chr1:147649816-147670048	1	-	147652611	147670048	0	8	422,56,133,88,80,131,129,219,	0,2775,4377,5344,9143,9579,9830,20013,
#Partially deleted in new
chr1	147651973	147670278	chr1:147651973-147670278	1	-	147652611	147670048	789624	6	674,133,88,80,131,449,	0,2220,3187,6986,7422,17856,
#Partially deleted in new
chr1	147652513	147670279	chr1:147652513-147670279	0	-	147659024	147670048	789624	5	134,133,88,80,450,	0,1680,2647,6446,17316,
#Partially deleted in new
chr1	147652548	147659677	chr1:147652548-147659677	0	-	147652611	147659677	789624	6	99,133,88,80,131,31,	0,1645,2612,6411,6847,7098,
#Partially deleted in new
chr1	147652586	147659349	chr1:147652586-147659349	0	-	147652586	147652586	8553170	4	61,133,88,390,	0,1607,2574,6373,
#Partially deleted in new
chr1	147655225	147670452	chr1:147655225-147670452	0	-	147655225	147669895	789624	6	23,80,131,129,120,60,	0,3734,4170,4421,14604,15167,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	147689255	147689537	chr1:147689255-147689537	3	+	147689255	147689255	8553170	1	282,	0,
#Partially deleted in new
chr1	147697793	147699335	chr1:147697793-147699335	3	+	147697793	147697793	8553170	2	56,390,	0,1152,
#Partially deleted in new
chr1	147756198	147760606	chr1:147756198-147760606	1	-	147758161	147759238	789624	2	3073,108,	0,4300,
#Partially deleted in new
chr1	147756199	147773362	chr1:147756199-147773362	3	-	147758161	147759238	789624	2	3072,111,	0,17052,
#Deleted in new
chr1	147757184	147758434	chr1:147757184-147758434	0	+	147757184	147757184	8553170	2	308,32,	0,1218,
#Deleted in new
chr1	147757292	147758409	chr1:147757292-147758409	3	+	147757292	147757292	8553170	2	479,56,	0,1061,
#Partially deleted in new
chr1	147758483	147773354	chr1:147758483-147773354	0	-	147758483	147759238	789624	2	788,103,	0,14768,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	147777589	147788953	chr1:147777589-147788953	3	+	147777589	147777589	8553170	2	134,346,	0,11018,
#Deleted in new
chr1	147840961	147842359	chr1:147840961-147842359	7	+	147840961	147840961	16724991	1	1398,	0,
#Partially deleted in new
chr1	147907955	147909257	chr1:147907955-147909257	3	+	147907955	147909257	789624	1	1302,	0,
#Partially deleted in new
chr1	147928392	147993339	chr1:147928392-147993339	3	+	147928536	147992917	789624	14	186,60,104,107,102,121,81,110,89,93,96,90,66,629,	0,8234,10321,15045,15604,24952,25929,38161,40482,41474,57806,60039,64109,64318,
#Partially deleted in new
chr1	147928392	147993521	chr1:147928392-147993521	0	+	147928392	147928392	8553170	14	186,60,104,107,102,121,81,110,606,93,96,90,66,811,	0,8234,10321,15045,15604,24952,25929,38161,39965,41474,57806,60039,64109,64318,
#Partially deleted in new
chr1	147928392	147993339	chr1:147928392-147993339	0	+	147928536	147944038	8553170	14	186,60,104,107,122,121,81,110,89,93,96,90,66,629,	0,8234,10321,15045,15584,24952,25929,38161,40482,41474,57806,60039,64109,64318,
#Partially deleted in new
chr1	147928435	147966645	chr1:147928435-147966645	0	+	147928536	147966645	789624	7	143,104,107,102,121,81,92,	0,10278,15002,15561,24909,25886,38118,
#Partially deleted in new
chr1	147944081	147986273	chr1:147944081-147986273	0	+	147944081	147968387	789624	8	17,121,81,110,97,89,93,75,	0,9263,10240,22472,24250,24793,25785,42117,
#Partially deleted in new
chr1	147953432	147986289	chr1:147953432-147986289	0	+	147953432	147968387	789624	7	33,81,110,97,69,93,91,	0,889,13121,14899,15462,16434,32766,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	147966770	147993339	chr1:147966770-147993339	0	+	147966770	147966770	8553170	7	1658,69,93,96,90,66,629,	0,2124,3096,19428,21661,25731,25940,
#Partially deleted in new
chr1	147968934	147993339	chr1:147968934-147993339	0	+	147968934	147968934	8553170	5	1025,96,90,66,629,	0,17264,19497,23567,23776,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	147993861	148012099	chr1:147993861-148012099	7	-	147993861	147993861	16724991	9	493,291,160,197,196,137,250,132,1642,	0,1734,2726,7457,9925,11511,15481,16275,16596,
#Partially deleted in new
chr1	147994300	148009592	chr1:147994300-148009592	5	-	147994300	147994300	16724991	7	54,291,225,197,196,137,250,	0,1295,2222,7018,9486,11072,15042,
#Partially deleted in new
chr1	148009420	148014956	chr1:148009420-148014956	5	-	148009420	148009420	16724991	4	172,132,162,111,	0,716,1037,5425,
#Deleted in new
chr1	148011798	148012228	chr1:148011798-148012228	3	+	148011798	148011798	8553170	1	430,	0,
#Deleted in new
chr1	148014416	148014583	chr1:148014416-148014583	3	-	148014416	148014416	8553170	1	167,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	148021849	148025931	chr1:148021849-148025931	3	+	148021849	148021849	8553170	3	149,190,155,	0,2680,3927,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	148024435	148025931	chr1:148024435-148025931	0	+	148024435	148024435	8553170	2	284,155,	0,1341,
#Partially deleted in new
chr1	148080597	148093883	chr1:148080597-148093883	7	+	148080597	148080597	16724991	11	156,114,188,125,239,117,227,144,139,46,146,	0,1050,1605,2482,5727,7919,8602,9759,10985,11429,13140,
#Partially deleted in new
chr1	148102045	148127003	chr1:148102045-148127003	1	-	148103895	148127003	789624	20	1867,109,169,52,173,52,173,52,164,52,206,73,215,103,210,212,73,215,56,117,	0,2491,3314,4135,4896,5665,6436,7238,8332,12391,13747,14417,15526,16574,18455,20009,20683,21807,24783,24841,
#Partially deleted in new
chr1	148102046	148127288	chr1:148102046-148127288	1	-	148103895	148127003	789624	21	1866,109,169,52,173,52,173,52,164,52,206,73,215,103,210,212,73,215,103,210,148,	0,2490,3313,4134,4895,5664,6435,7237,8331,12390,13746,14416,15525,16573,18454,20008,20682,21806,22852,24782,25094,
#Partially deleted in new
chr1	148102150	148151988	chr1:148102150-148151988	0	-	148109361	148126881	789624	23	1762,109,169,52,173,52,173,128,164,52,206,73,215,103,210,212,73,215,210,148,142,272,239,	0,2386,3209,4030,4791,5560,6331,7133,8227,12286,13642,14312,15421,16469,18350,19904,20578,21702,24678,24990,33521,41264,49599,
#Partially deleted in new
chr1	148102150	148152322	chr1:148102150-148152322	3	-	148103895	148127003	789624	24	1762,109,169,52,173,52,173,52,164,52,206,73,215,103,210,212,73,215,103,210,142,99,272,603,	0,2386,3209,4030,4791,5560,6331,7133,8227,12286,13642,14312,15421,16469,18350,19904,20578,21702,22748,24678,33521,35560,41264,49569,
#Partially deleted in new
chr1	148104582	148137802	chr1:148104582-148137802	0	-	148104582	148126881	789624	22	63,169,52,173,52,173,52,164,52,206,73,215,103,210,212,73,215,210,148,124,142,92,	0,777,1598,2359,3128,3899,4701,5795,9854,11210,11880,12989,14037,15918,17472,18146,19270,22246,22558,30541,31089,33128,
#Deleted in new
chr1	148129496	148129898	chr1:148129496-148129898	7	+	148129496	148129496	16724991	1	402,	0,
#Deleted in new
chr1	148146394	148149566	chr1:148146394-148149566	7	+	148146394	148146394	16724991	2	527,406,	0,2766,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	148159212	148200553	chr1:148159212-148200553	3	-	148159212	148159212	8553170	6	3647,67,106,323,100,23,	0,5184,15075,36746,40782,41318,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	148162359	148163840	chr1:148162359-148163840	3	+	148162359	148162359	8553170	2	1229,49,	0,1432,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	148162709	148163413	chr1:148162709-148163413	1	+	148162709	148162709	789624	2	283,307,	0,397,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	148162812	148163413	chr1:148162812-148163413	1	+	148162812	148162812	8553170	2	180,272,	0,329,
#Partially deleted in new
chr1	148162876	148164589	chr1:148162876-148164589	0	+	148162876	148162876	8553170	3	116,110,329,	0,880,1384,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	148162876	148174858	chr1:148162876-148174858	0	+	148162876	148162876	8553170	3	116,110,609,	0,880,11373,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	148162876	148174928	chr1:148162876-148174928	0	+	148162876	148162876	8553170	2	116,679,	0,11373,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	148162876	148174884	chr1:148162876-148174884	0	+	148162876	148162876	8553170	3	116,59,635,	0,880,11373,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	148162876	148174897	chr1:148162876-148174897	0	+	148162876	148162876	8553170	3	116,75,648,	0,915,11373,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	148162876	148186630	chr1:148162876-148186630	0	+	148162876	148162876	8553170	3	116,75,466,	0,915,23288,
#Deleted in new
chr1	148162920	148163212	chr1:148162920-148163212	0	+	148162920	148162920	8553170	2	72,29,	0,263,
#Partially deleted in new
chr1	148163571	148176331	chr1:148163571-148176331	1	-	148163571	148163571	8553170	7	101,67,197,67,114,106,34,	0,825,4782,9372,10054,10716,12726,
#Deleted in new
chr1	148193715	148193838	chr1:148193715-148193838	7	+	148193715	148193715	16724991	1	123,	0,
#Partially deleted in new
chr1	148195958	148228657	chr1:148195958-148228657	1	-	148195958	148195958	8553170	8	323,100,69,32,194,128,82,122,	0,4036,9665,10643,20978,30535,32029,32577,
#Partially deleted in new
chr1	148196097	148205749	chr1:148196097-148205749	0	-	148196097	148196097	8553170	4	184,100,103,126,	0,3897,4433,9526,
#Partially deleted in new
chr1	148196249	148205752	chr1:148196249-148205752	0	-	148196249	148196249	8553170	3	32,100,129,	0,3745,9374,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	148199999	148217078	chr1:148199999-148217078	1	-	148199999	148199999	8553170	7	95,103,71,69,139,122,142,	0,531,1408,5624,6495,8533,16937,
#Partially deleted in new
chr1	148206001	148217078	chr1:148206001-148217078	0	-	148206001	148206001	8553170	2	632,142,	0,10935,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	148206595	148228070	chr1:148206595-148228070	1	-	148206595	148206595	8553170	6	38,30,122,194,64,83,	0,1338,1937,10341,20139,21392,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	148207838	148247108	chr1:148207838-148247108	0	-	148207838	148207838	789624	4	816,194,82,480,	0,9098,20149,38790,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	148207842	148217078	chr1:148207842-148217078	0	-	148207842	148207842	8553170	4	42,122,267,142,	0,690,8196,9094,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	148208087	148246463	chr1:148208087-148246463	0	-	148208087	148208087	8553170	5	567,194,128,82,169,	0,8849,18406,19900,38207,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	148208087	148255012	chr1:148208087-148255012	0	-	148208087	148208087	8553170	3	567,194,84,	0,8849,46841,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	148208090	148246686	chr1:148208090-148246686	0	-	148208090	148208090	8553170	5	564,194,214,82,58,	0,8846,16985,19897,38538,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	148208093	148218888	chr1:148208093-148218888	1	-	148208093	148208093	8553170	2	561,1952,	0,8843,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	148208095	148246764	chr1:148208095-148246764	0	-	148208095	148208095	8553170	5	559,194,82,122,136,	0,8841,19892,20440,38533,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	148208587	148228032	chr1:148208587-148228032	0	-	148208587	148208587	8553170	5	67,194,214,128,45,	0,8349,16488,17906,19400,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	148216946	148228658	chr1:148216946-148228658	0	-	148216946	148216946	8553170	6	184,214,128,64,82,123,	0,8129,9547,9788,11041,11589,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	148216983	148228657	chr1:148216983-148228657	1	-	148216983	148216983	8553170	6	147,214,153,305,82,122,	0,8092,9117,9510,11004,11552,
#Deleted in new
chr1	148234272	148234489	chr1:148234272-148234489	7	+	148234272	148234272	16724991	1	217,	0,
#Deleted in new
chr1	148246168	148246685	chr1:148246168-148246685	7	+	148246168	148246168	16724991	1	517,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	148263475	148263632	chr1:148263475-148263632	3	+	148263475	148263475	8553170	1	157,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	148271883	148280749	chr1:148271883-148280749	3	-	148271883	148271883	8553170	3	152,184,84,	0,1016,8782,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	148288000	148288951	chr1:148288000-148288951	7	-	148288000	148288000	16724991	2	57,228,	0,723,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	148290888	148296776	chr1:148290888-148296776	0	-	148290888	148290888	8553170	4	416,164,59,504,	0,4861,5235,5384,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	148290888	148388974	chr1:148290888-148388974	0	-	148290888	148290888	8553170	7	413,164,59,227,65,235,232,	0,4861,5235,5384,42325,42990,97854,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	148290888	148459959	chr1:148290888-148459959	3	-	148290888	148290888	8553170	9	413,164,59,227,65,21,233,169,358,	0,4861,5235,5384,42325,45010,52973,53324,168713,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	148290889	148297271	chr1:148290889-148297271	0	-	148290889	148290889	8553170	6	412,135,164,59,227,143,	0,2024,4860,5234,5383,6239,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	148295179	148297556	chr1:148295179-148297556	3	+	148295179	148295179	8553170	2	117,1801,	0,576,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	148295894	148344636	chr1:148295894-148344636	3	+	148295894	148295894	8553170	4	636,84,106,408,	0,37973,38759,48334,
#Deleted in new
chr1	148317682	148318013	chr1:148317682-148318013	7	-	148317682	148317682	16724991	1	331,	0,
#Partially deleted in new
chr1	148328998	148344636	chr1:148328998-148344636	1	+	148328998	148328998	8553170	3	364,559,408,	0,527,15230,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	148330270	148330394	chr1:148330270-148330394	3	+	148330270	148330270	8553170	1	124,	0,
#Deleted in new
chr1	148334478	148334554	chr1:148334478-148334554	3	-	148334478	148334478	5263520	1	76,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	148334611	148334767	chr1:148334611-148334767	3	-	148334611	148334611	8553170	1	156,	0,
#Deleted in new
chr1	148358244	148358686	chr1:148358244-148358686	3	-	148358244	148358244	8553170	1	442,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	148362369	148362533	chr1:148362369-148362533	3	-	148362369	148362369	789624	1	164,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	148362994	148459813	chr1:148362994-148459813	1	-	148362994	148362994	8553170	4	392,109,1499,212,	0,6323,15061,96607,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	148385828	148385963	chr1:148385828-148385963	3	-	148385828	148385828	8553170	1	135,	0,
#Partially deleted in new
chr1	148388281	148388363	chr1:148388281-148388363	3	+	148388281	148388281	5263520	1	82,	0,
#Partially deleted in new
chr1	148402515	148425219	chr1:148402515-148425219	7	+	148402515	148402515	16724991	4	150,103,236,593,	0,15147,17856,22111,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	148402714	148402875	chr1:148402714-148402875	3	+	148402714	148402714	789624	1	161,	0,
#Partially deleted in new
chr1	148414866	148432545	chr1:148414866-148432545	5	+	148414866	148414866	16724991	7	130,236,127,159,120,119,451,	0,5505,9196,10639,12972,13862,17228,
#Partially deleted in new
chr1	148414866	148432545	chr1:148414866-148432545	5	+	148414866	148414866	16724991	8	130,236,127,12,159,123,119,451,	0,5505,9196,9760,10639,12969,13862,17228,
#Partially deleted in new
chr1	148414866	148432545	chr1:148414866-148432545	5	+	148414866	148414866	16724991	9	130,103,236,127,52,159,178,119,451,	0,2796,5505,9196,9760,10639,12948,13862,17228,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	148415196	148428978	chr1:148415196-148428978	4	+	148415196	148415196	16724991	6	211,236,118,127,52,250,	0,5175,5623,8866,9430,13532,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	148415196	148429361	chr1:148415196-148429361	4	+	148415196	148415196	16724991	6	211,236,52,315,108,633,	0,5175,9430,10153,12639,13532,
#Partially deleted in new
chr1	148415257	148428847	chr1:148415257-148428847	5	+	148415257	148415257	16724991	8	150,85,103,236,52,159,178,119,	0,792,2405,5114,9369,10248,12557,13471,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	148432955	148498747	chr1:148432955-148498747	1	-	148432955	148432955	8553170	6	688,87,121,363,155,107,	0,2190,3488,27775,30432,65685,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	148432955	148519604	chr1:148432955-148519604	1	-	148432955	148432955	8553170	7	688,209,121,155,73,156,132,	0,2190,3488,30432,54788,83134,86517,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	148432958	148459757	chr1:148432958-148459757	0	-	148432958	148432958	789624	3	685,209,156,	0,2187,26643,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	148434773	148459840	chr1:148434773-148459840	0	-	148434773	148434773	8553170	2	581,239,	0,24828,
#Deleted in new
chr1	148435104	148436926	chr1:148435104-148436926	7	+	148435104	148435104	16724991	2	72,1607,	0,215,
#Partially deleted in new
chr1	148458500	148460150	chr1:148458500-148460150	0	-	148458500	148458500	8553170	3	194,98,239,	0,1101,1411,
#Partially deleted in new
chr1	148458642	148459689	chr1:148458642-148459689	7	-	148458642	148458642	16724991	2	52,88,	0,959,
#Partially deleted in new
chr1	148458813	148459871	chr1:148458813-148459871	3	+	148458813	148458813	8553170	1	1058,	0,
#Partially deleted in new
chr1	148458813	148459869	chr1:148458813-148459869	0	+	148458813	148458813	8553170	1	1056,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	148479823	148483679	chr1:148479823-148483679	3	-	148482757	148483252	789624	1	3856,	0,
#Partially deleted in new
chr1	148531384	148595717	chr1:148531384-148595717	1	-	148533004	148595717	789624	66	1864,109,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,52,164,52,206,73,215,103,210,212,73,215,103,175,	0,2476,3299,4068,4839,5626,6449,7264,8025,8794,9565,10346,11169,11978,12739,13508,14279,15060,15883,16686,17447,18216,18987,19768,20591,21394,22155,22924,23695,24482,25305,26106,26867,27636,28408,29199,30022,30851,31612,32381,33154,33935,34758,35567,36328,37097,37870,38657,39480,43493,44254,45025,45798,46598,47689,51756,53086,53756,54870,55916,57799,59372,60047,61167,62213,64158,
#Partially deleted in new
chr1	148531384	148596011	chr1:148531384-148596011	0	-	148533004	148595717	789624	71	1864,109,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,109,173,52,173,52,173,52,164,52,206,73,215,103,210,212,73,215,103,210,157,	0,2476,3299,4068,4839,5626,6449,7264,8025,8794,9565,10346,11169,11978,12739,13508,14279,15060,15883,16686,17447,18216,18987,19768,20591,21394,22155,22924,23695,24482,25305,26106,26867,27636,28408,29199,30022,30851,31612,32381,33154,33935,34758,35567,36328,37097,37870,38657,39480,40297,41058,41845,42668,43493,44254,45025,45798,46598,47689,51756,53086,53756,54870,55916,57799,59372,60047,61167,62213,64158,64470,
#Partially deleted in new
chr1	148532117	148593685	chr1:148532117-148593685	1	-	148533004	148593668	789624	22	1131,109,173,52,173,52,173,52,173,109,173,52,173,52,173,52,164,52,206,73,215,88,	0,19035,19858,20661,30879,31648,32421,36364,37137,41112,41935,42760,43521,44292,45065,45865,46956,51023,52353,53023,54137,61480,
#Partially deleted in new
chr1	148532978	148595890	chr1:148532978-148595890	1	-	148533004	148595717	789624	21	270,109,173,52,173,52,173,52,164,52,206,73,215,103,210,212,73,215,103,210,41,	0,18174,18997,19800,42660,43431,44204,45004,46095,50162,51492,52162,53276,54322,56205,57778,58453,59573,60619,62564,62871,
#Partially deleted in new
chr1	148532978	148595890	chr1:148532978-148595890	1	-	148533004	148595717	789624	14	270,52,173,52,173,52,164,52,206,73,215,103,210,36,	0,2474,18997,19800,42660,45004,46095,50162,51492,58453,59573,60619,62564,62876,
#Partially deleted in new
chr1	148532978	148595890	chr1:148532978-148595890	1	-	148577331	148589358	789624	15	270,109,173,52,173,52,173,52,52,206,73,215,103,181,167,	0,18174,18997,19800,42660,43431,44204,45004,50162,51492,52162,53276,54322,56205,62745,
#Partially deleted in new
chr1	148532978	148595890	chr1:148532978-148595890	1	-	148577331	148595717	789624	14	270,109,173,52,173,52,173,52,52,206,73,215,103,348,	0,18174,18997,19800,42660,43431,44204,45004,50162,51492,52162,53276,54322,62564,
#Partially deleted in new
chr1	148532978	148595890	chr1:148532978-148595890	1	-	148533004	148595717	789624	19	270,109,173,52,173,52,164,52,206,73,215,103,210,212,73,215,103,210,36,	0,18174,18997,19800,42660,45004,46095,50162,51492,52162,53276,54322,56205,57778,58453,59573,60619,62564,62876,
#Partially deleted in new
chr1	148532979	148595890	chr1:148532979-148595890	1	-	148577331	148595717	789624	20	269,109,173,52,173,52,173,52,52,206,73,215,103,210,212,73,215,53,155,36,	0,18173,18996,19799,42659,43430,44203,45003,50161,51491,52161,53275,54321,56204,57777,58452,59572,62563,62618,62875,
#Partially deleted in new
chr1	148593644	148679742	chr1:148593644-148679742	0	-	148593644	148595717	789624	8	56,210,70,83,336,260,74,281,	0,1898,4629,4968,13765,22046,46371,85817,
#Partially deleted in new
chr1	148607037	148679751	chr1:148607037-148679751	3	-	148607082	148679464	789624	5	122,336,260,74,290,	0,372,8653,32978,72424,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	148739378	148739479	chr1:148739378-148739479	3	+	148739378	148739378	8553170	1	101,	0,
#Deleted in new
chr1	148748893	148750099	chr1:148748893-148750099	3	+	148748952	148749498	789624	1	1206,	0,
#Partially deleted in new
chr1	148772639	148784594	chr1:148772639-148784594	7	-	148772639	148772639	16724991	4	155,147,161,113,	0,3370,6201,11842,
#Deleted in new
chr1	148795796	148796325	chr1:148795796-148796325	7	+	148795796	148795796	16724991	1	529,	0,
#Partially deleted in new
chr1	148808180	148932725	chr1:148808180-148932725	1	+	148808504	148932292	789624	7	557,56,152,111,77,124,613,	0,55069,60290,81603,121016,123619,123932,
#Partially deleted in new
chr1	148808465	149032955	chr1:148808465-149032955	1	+	148808504	149031985	789624	46	272,56,152,111,77,124,176,118,132,120,93,213,159,114,138,180,195,165,82,92,117,138,113,128,89,233,436,193,117,529,236,52,224,186,252,132,120,190,125,240,117,227,144,139,47,1012,	0,54784,60005,81318,120731,123334,123647,129281,152188,153371,153730,153962,157018,158077,158373,159260,160370,163714,164045,166048,169471,169812,171271,172804,183419,189677,193125,194384,195148,196443,198735,199978,201102,204125,207833,209282,210076,211681,212563,215979,218249,218935,220094,221321,221766,223478,
#Partially deleted in new
chr1	148808477	148915750	chr1:148808477-148915750	1	+	148808504	148915614	789624	5	260,56,152,111,244,	0,54772,59993,81306,107029,
#Partially deleted in new
chr1	148808484	149032955	chr1:148808484-149032955	1	+	148808504	149031985	789624	47	253,56,152,111,77,124,176,118,132,120,93,213,159,114,138,180,195,165,82,92,117,138,113,128,89,233,436,193,117,529,236,52,224,153,186,252,132,120,190,125,240,117,227,144,139,47,1012,	0,54765,59986,81299,120712,123315,123628,129262,152169,153352,153711,153943,156999,158058,158354,159241,160351,163695,164026,166029,169452,169793,171252,172785,183400,189658,193106,194365,195129,196424,198716,199959,201083,201958,204106,207814,209263,210057,211662,212544,215960,218230,218916,220075,221302,221747,223459,
#Deleted in new
chr1	148839482	148839732	chr1:148839482-148839732	3	-	148839482	148839482	8553170	1	250,	0,
#Partially deleted in new
chr1	148844381	149033019	chr1:148844381-149033019	1	+	148844774	149031985	789624	46	413,56,152,111,77,124,176,118,132,120,93,213,159,114,138,180,195,165,82,92,117,138,113,128,89,233,106,193,120,529,236,52,224,153,252,132,120,190,125,240,117,227,144,139,47,1076,	0,18868,24089,45402,84815,87418,87731,93365,116272,117455,117814,118046,121102,122161,122457,123344,124454,127798,128129,130132,133555,133896,135355,136888,147503,153761,157209,158468,159229,160527,162819,164062,165186,166061,171917,173366,174160,175765,176647,180063,182333,183019,184178,185405,185850,187562,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	148844428	148938434	chr1:148844428-148938434	0	+	148844428	148844428	8553170	6	366,111,77,124,176,688,	0,45355,84768,87371,87684,93318,
#Partially deleted in new
chr1	148844440	148937862	chr1:148844440-148937862	0	+	148844440	148844440	8553170	6	354,56,122,152,111,116,	0,18809,21970,24030,45343,93306,
#Partially deleted in new
chr1	148844518	148868618	chr1:148844518-148868618	0	+	148844518	148844518	8553170	4	276,56,92,148,	0,18731,21895,23952,
#Partially deleted in new
chr1	148844532	148868609	chr1:148844532-148868609	0	+	148844532	148844532	8553170	4	262,56,119,139,	0,18717,21881,23938,
#Partially deleted in new
chr1	148844535	148932238	chr1:148844535-148932238	0	+	148931804	148932238	789624	4	259,77,124,118,	0,84661,87264,87585,
#Partially deleted in new
chr1	148844591	148932151	chr1:148844591-148932151	0	+	148844774	148931805	789624	6	203,56,152,111,124,39,	0,18658,23879,45192,87208,87521,
#Partially deleted in new
chr1	148844597	148868784	chr1:148844597-148868784	1	+	148844774	148868643	789624	3	197,56,314,	0,18652,23873,
#Partially deleted in new
chr1	148844604	148965514	chr1:148844604-148965514	0	+	148844774	148965514	789624	5	190,56,119,186,31,	0,18645,23866,117850,120879,
#Partially deleted in new
chr1	148844612	148870651	chr1:148844612-148870651	1	+	148844774	148870413	789624	4	182,56,152,484,	0,18637,23858,25555,
#Partially deleted in new
chr1	148845305	148931810	chr1:148845305-148931810	0	+	148845444	148931810	789624	6	162,56,152,111,77,11,	0,17944,23165,44478,83891,86494,
#Partially deleted in new
chr1	148868543	148942309	chr1:148868543-148942309	0	+	148868543	148937755	789624	4	79,111,118,511,	0,21240,69203,73255,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	148889402	148932728	chr1:148889402-148932728	1	+	148889490	148932292	789624	5	127,111,77,124,616,	0,381,39794,42397,42710,
#Partially deleted in new
chr1	148889402	148937778	chr1:148889402-148937778	0	+	148889490	148937778	789624	6	127,111,77,124,176,32,	0,381,39794,42397,42710,48344,
#Partially deleted in new
chr1	148889435	148932380	chr1:148889435-148932380	0	+	148889490	148931805	789624	4	94,111,124,268,	0,348,42364,42677,
#Partially deleted in new
chr1	148889462	149033016	chr1:148889462-149033016	3	+	148889753	149032089	789624	44	432,77,124,176,118,132,120,93,213,159,114,138,180,195,165,82,92,117,138,113,128,89,233,436,193,120,529,236,52,224,153,186,252,132,120,190,125,240,117,227,144,139,47,1017,	0,39734,42337,42650,48284,71191,72374,72733,72965,76021,77080,77376,78263,79373,82717,83048,85051,88474,88815,90274,91807,102422,108680,112128,113387,114148,115446,117738,118981,120105,120980,123128,126836,128285,129079,130684,131566,134982,137252,137938,139097,140324,140769,142537,
#Partially deleted in new
chr1	148889559	148932357	chr1:148889559-148932357	0	+	148889753	148931805	789624	3	335,124,245,	0,42240,42553,
#Partially deleted in new
chr1	148889559	148937787	chr1:148889559-148937787	0	+	148889559	148889559	8553170	2	335,41,	0,48187,
#Partially deleted in new
chr1	148889563	149033016	chr1:148889563-149033016	1	+	148889753	149031985	789624	44	331,77,124,176,118,132,120,93,213,159,114,138,180,195,165,82,92,117,138,113,128,89,233,436,193,120,529,236,52,224,153,186,252,132,120,190,125,240,117,227,144,139,47,1073,	0,39633,42236,42549,48183,71090,72273,72632,72864,75920,76979,77275,78162,79272,82616,82947,84950,88373,88714,90173,91706,102321,108579,112027,113286,114047,115345,117637,118880,120004,120879,123027,126735,128184,128978,130583,131465,134881,137151,137837,138996,140223,140668,142380,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	148889575	148932729	chr1:148889575-148932729	1	+	148889753	148932292	789624	4	319,77,124,617,	0,39621,42224,42537,
#Partially deleted in new
chr1	148889608	148993882	chr1:148889608-148993882	1	+	148889753	148992260	789624	23	286,77,124,176,118,132,120,93,213,159,114,138,180,195,165,82,92,117,138,113,128,89,1628,	0,39588,42191,42504,48138,71045,72228,72587,72819,75875,76934,77230,78117,79227,82571,82902,84905,88328,88669,90128,91661,102276,102646,
#Partially deleted in new
chr1	148889644	148993882	chr1:148889644-148993882	1	+	148889753	148992036	789624	22	250,77,124,176,118,132,120,93,213,159,114,138,180,195,165,82,92,117,138,113,128,1998,	0,39552,42155,42468,48102,71009,72192,72551,72783,75839,76898,77194,78081,79191,82535,82866,84869,88292,88633,90092,91625,102240,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	148889783	148932725	chr1:148889783-148932725	0	+	148889783	148889783	8553170	3	111,2727,613,	0,39413,42329,
#Partially deleted in new
chr1	148929136	148932437	chr1:148929136-148932437	0	+	148929136	148929136	8553170	3	137,124,325,	0,2663,2976,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	148939738	148939817	chr1:148939738-148939817	3	-	148939738	148939738	8553170	1	79,	0,
#Partially deleted in new
chr1	148951936	148981746	chr1:148951936-148981746	1	+	148960656	148981444	789624	17	218,132,120,93,213,159,114,138,180,195,165,82,92,117,138,113,477,	0,8717,9900,10259,10491,13547,14606,14902,15789,16899,20243,20574,22577,26000,26341,27800,29333,
#Partially deleted in new
chr1	148952123	148993880	chr1:148952123-148993880	1	+	148952780	148992260	789624	19	1782,132,120,93,213,159,114,138,180,195,165,82,92,117,138,113,128,89,1626,	0,8530,9713,10072,10304,13360,14419,14715,15602,16712,20056,20387,22390,25813,26154,27613,29146,39761,40131,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	148952340	148986477	chr1:148952340-148986477	1	+	148952780	148981444	789624	17	1565,132,120,93,213,159,114,138,180,195,165,82,92,117,138,113,5208,	0,8313,9496,9855,10087,13143,14202,14498,15385,16495,19839,20170,22173,25596,25937,27396,28929,
#Partially deleted in new
chr1	148962409	148967770	chr1:148962409-148967770	0	+	148962409	148962409	8553170	5	231,159,114,138,45,	0,3074,4133,4429,5316,
#Partially deleted in new
chr1	148962571	148989385	chr1:148962571-148989385	0	+	148962571	148962571	8553170	10	69,159,114,138,180,195,165,82,92,202,	0,2912,3971,4267,5154,6264,9608,9939,11942,26612,
#Partially deleted in new
chr1	148979759	149032302	chr1:148979759-149032302	0	+	148979759	149027455	789624	6	90,117,227,144,139,359,	0,46955,47641,48800,50027,52184,
#Partially deleted in new
chr1	148979794	148993882	chr1:148979794-148993882	0	+	148979794	148993499	789624	4	55,128,89,398,	0,1475,12090,13690,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	149006308	149009527	chr1:149006308-149009527	3	-	149006308	149006308	8553170	3	292,71,43,	0,867,3176,
#Partially deleted in new
chr1	149008448	149021766	chr1:149008448-149021766	0	+	149008448	149008448	8553170	7	47,224,153,252,132,120,1620,	0,1119,1994,7850,9299,10093,11698,
#Partially deleted in new
chr1	149016490	149027444	chr1:149016490-149027444	0	+	149016490	149016490	8553170	5	60,132,120,190,44,	0,1257,2051,3656,10910,
#Partially deleted in new
chr1	149017620	149024552	chr1:149017620-149024552	0	+	149017620	149017620	8553170	5	259,120,190,125,108,	0,921,2526,3408,6824,
#Partially deleted in new
chr1	149017759	149028587	chr1:149017759-149028587	0	+	149017759	149028587	789624	7	120,120,190,125,117,227,28,	0,782,2387,3269,8955,9641,10800,
#Deleted in new
chr1	149017792	149019588	chr1:149017792-149019588	0	+	149017792	149017792	8553170	3	87,120,98,	0,749,1698,
#Deleted in new
chr1	149018333	149021071	chr1:149018333-149021071	0	+	149018333	149018333	8553170	3	328,190,43,	0,1813,2695,
#Partially deleted in new
chr1	149018670	149026269	chr1:149018670-149026269	3	-	149018670	149018670	8553170	3	62,143,349,	0,6991,7250,
#Deleted in new
chr1	149024208	149026803	chr1:149024208-149026803	0	+	149024208	149024208	8553170	2	476,89,	0,2506,
#Deleted in new
chr1	149026593	149028672	chr1:149026593-149028672	0	+	149026593	149026593	8553170	3	238,227,113,	0,807,1966,
#Deleted in new
chr1	149027426	149030076	chr1:149027426-149030076	0	+	149027426	149027426	8553170	3	201,144,290,	0,1133,2360,
#Partially deleted in new
chr1	149027558	149047267	chr1:149027558-149047267	0	+	149027558	149027558	8553170	7	69,144,139,47,106,72,248,	0,1001,2228,2673,4385,19000,19461,
#Deleted in new
chr1	149029992	149032497	chr1:149029992-149032497	0	+	149029992	149029992	8553170	2	286,554,	0,1951,
#Partially deleted in new
chr1	149030245	149046787	chr1:149030245-149046787	0	+	149030245	149030245	8553170	3	33,106,229,	0,1698,16313,
#Deleted in new
chr1	149031148	149032144	chr1:149031148-149032144	0	+	149031148	149031148	8553170	2	76,201,	0,795,
#Deleted in new
chr1	149046592	149048286	chr1:149046592-149048286	0	+	149046592	149046592	8553170	3	38,295,402,	0,427,1292,
#Deleted in new
chr1	149047013	149048058	chr1:149047013-149048058	0	+	149047013	149047013	8553170	3	301,150,174,	0,625,871,
#Partially deleted in new
chr1	149048575	149051273	chr1:149048575-149051273	3	+	149048575	149048575	8553170	2	415,454,	0,2244,
#Partially deleted in new
chr1	149054026	149103539	chr1:149054026-149103539	3	-	149055655	149082139	789624	29	1873,109,173,52,173,109,173,52,173,52,173,52,164,52,206,73,215,103,210,212,73,215,103,210,154,142,31,269,239,	0,2485,3308,4137,4898,5673,6496,7305,8066,8835,9606,10404,11499,15567,16907,17577,18691,19741,21628,23181,23856,24980,26026,27938,28250,36726,38728,44411,49274,
#Partially deleted in new
chr1	149054032	149082311	chr1:149054032-149082311	1	-	149055655	149082139	789624	25	1867,109,173,52,173,109,173,52,173,52,173,52,164,52,206,73,215,103,210,212,73,215,103,210,40,	0,2479,3302,4131,4892,5667,6490,7299,8060,8829,9600,10398,11493,15561,16901,17571,18685,19735,21622,23175,23850,24974,26020,27932,28239,
#Partially deleted in new
chr1	149054032	149082311	chr1:149054032-149082311	1	-	149055655	149082139	789624	21	1867,109,173,52,173,52,173,52,164,52,206,73,215,103,210,212,73,215,103,210,40,	0,2479,6490,7299,8060,8829,9600,10398,11493,15561,16901,17571,18685,19735,21622,23175,23850,24974,26020,27932,28239,
#Partially deleted in new
chr1	149054032	149082311	chr1:149054032-149082311	1	-	149055655	149082139	789624	20	1867,109,173,52,173,52,173,52,164,52,206,73,215,103,210,212,73,215,103,347,	0,2479,3302,4131,4892,8829,9600,10398,11493,15561,16901,17571,18685,19735,21622,23175,23850,24974,26020,27932,
#Partially deleted in new
chr1	149054032	149082311	chr1:149054032-149082311	1	-	149055655	149082139	789624	19	1867,109,173,52,173,52,164,52,206,73,215,103,210,212,73,215,103,210,40,	0,2479,3302,4131,4892,10398,11493,15561,16901,17571,18685,19735,21622,23175,23850,24974,26020,27932,28239,
#Partially deleted in new
chr1	149055629	149075866	chr1:149055629-149075866	1	-	149063781	149075829	789624	14	270,109,173,52,173,52,173,52,52,206,73,215,103,212,	0,882,1705,2534,3295,7232,8003,8801,13964,15304,15974,17088,18138,20025,
#Partially deleted in new
chr1	149055629	149082311	chr1:149055629-149082311	1	-	149055655	149082139	789624	21	270,109,173,52,173,52,173,52,164,52,206,73,215,103,210,212,73,215,103,210,40,	0,882,1705,2534,6463,7232,8003,8801,9896,13964,15304,15974,17088,18138,20025,21578,22253,23377,24423,26335,26642,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	149059762	149066634	chr1:149059762-149066634	0	-	149059762	149059762	8553170	6	46,861,173,52,173,2204,	0,760,2330,3099,3870,4668,
#Partially deleted in new
chr1	149111303	149121866	chr1:149111303-149121866	7	-	149111303	149111303	16724991	3	214,226,82,	0,2183,10481,
#Deleted in new
chr1	149162782	149162944	chr1:149162782-149162944	3	-	149162782	149162782	8553170	1	162,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	149176021	149251013	chr1:149176021-149251013	3	+	149176021	149176021	8553170	3	229,160,449,	0,14614,74543,
#Partially deleted in new
chr1	149176040	149180611	chr1:149176040-149180611	0	+	149176040	149176040	8553170	2	210,316,	0,4255,
#Partially deleted in new
chr1	149176182	149191268	chr1:149176182-149191268	1	+	149176182	149176182	8553170	4	68,55,160,122,	0,975,14453,14964,
#Partially deleted in new
chr1	149197991	149321732	chr1:149197991-149321732	7	-	149197991	149197991	16724991	7	180,124,77,111,152,56,233,	0,369,3022,42385,63648,68977,123508,
#Deleted in new
chr1	149264251	149264816	chr1:149264251-149264816	3	+	149264251	149264251	8553170	1	565,	0,
#Deleted in new
chr1	149290512	149290762	chr1:149290512-149290762	3	+	149290512	149290512	8553170	1	250,	0,
#Partially deleted in new
chr1	149345660	149357612	chr1:149345660-149357612	7	+	149345660	149345660	16724991	4	110,161,147,155,	0,5590,8435,11797,
#Partially deleted in new
chr1	149390622	149556361	chr1:149390622-149556361	1	+	149475932	149554738	789624	97	300,82,260,336,467,103,215,73,206,52,164,52,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,109,1867,	0,40311,64695,72868,85018,87322,88257,89519,90056,91552,95507,96709,97390,98282,98938,99820,100516,101403,102145,103037,103695,104577,105279,106166,106902,107794,108450,109332,110034,110921,111663,112555,113211,114093,114795,115682,116424,117316,117972,118854,119556,120443,121185,122077,122733,123615,124313,125199,125941,126833,127487,128369,129065,129952,130696,131588,132242,133124,133822,134709,135447,136339,136991,137873,138551,139438,140176,141068,141722,142604,143302,144189,144931,145823,146477,147359,148053,148940,149678,150570,151230,152112,152790,153677,154415,155307,155967,156849,157527,158414,159152,160044,160704,161586,162264,163151,163872,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	149406375	149468030	chr1:149406375-149468030	3	+	149430977	149464153	8553170	6	106,296,82,260,336,3954,	0,2445,24558,48942,57115,57701,
#Partially deleted in new
chr1	149475759	149554764	chr1:149475759-149554764	1	+	149475932	149492791	789624	14	348,103,215,73,206,52,52,173,52,173,52,173,109,270,	0,2185,3120,4382,4919,6415,11572,17008,17900,42350,43232,43928,44815,78735,
#Partially deleted in new
chr1	149475932	149555644	chr1:149475932-149555644	1	+	149475932	149488036	789624	22	175,103,215,73,206,52,52,173,52,173,52,173,109,173,52,173,52,173,52,173,109,1150,	0,2012,2947,4209,4746,6242,11399,12080,12972,46932,52563,53241,54128,54866,55758,59621,60513,61167,76276,76954,77841,78562,
#Partially deleted in new
chr1	149477959	149555625	chr1:149477959-149555625	1	+	149477976	149554738	789624	22	88,215,73,206,52,164,52,173,52,173,52,173,109,173,52,173,52,173,52,173,109,1131,	0,920,2182,2719,4215,8170,9372,10053,10945,40150,41032,41728,42615,43359,44251,48110,49002,49654,50536,51214,52101,76535,
#Deleted in new
chr1	149499965	149524617	chr1:149499965-149524617	1	+	149499965	149504765	789624	20	41,168,48,173,52,173,52,173,109,173,52,173,52,173,109,173,52,173,52,173,	0,700,1639,2320,3212,3868,4750,10213,11100,11842,12734,13390,19026,19722,20609,21353,22245,22899,23781,24479,
#Partially deleted in new
chr1	149583864	149584464	chr1:149583864-149584464	3	+	149583897	149584392	789624	1	600,	0,
#Partially deleted in new
chr1	149606333	149646737	chr1:149606333-149646737	5	+	149606333	149606333	16724991	3	86,98,139,	0,1123,40265,
#Partially deleted in new
chr1	149607031	149646809	chr1:149607031-149646809	4	+	149607031	149607031	16724991	3	207,98,211,	0,425,39567,
#Partially deleted in new
chr1	149607306	149647610	chr1:149607306-149647610	4	+	149607306	149607306	16724991	2	248,1012,	0,39292,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	149607343	149679523	chr1:149607343-149679523	7	+	149607343	149607343	16724991	9	211,466,210,236,118,126,52,122,4193,	0,39255,48355,53510,53958,57177,57738,61845,67987,
#Partially deleted in new
chr1	149607408	149647624	chr1:149607408-149647624	4	+	149607408	149607408	16724991	3	146,347,244,	0,39190,39972,
#Partially deleted in new
chr1	149607466	149608516	chr1:149607466-149608516	7	+	149607466	149607466	16724991	2	88,55,	0,995,
#Partially deleted in new
chr1	149607764	149612402	chr1:149607764-149612402	3	+	149607764	149607764	8553170	4	159,55,194,39,	0,697,3890,4599,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	149636488	149661606	chr1:149636488-149661606	4	+	149636488	149636488	16724991	3	228,236,305,	0,24365,24813,
#Partially deleted in new
chr1	149636543	149669310	chr1:149636543-149669310	4	+	149636543	149636543	16724991	4	173,236,159,122,	0,24310,31756,32645,
#Partially deleted in new
chr1	149636649	149672793	chr1:149636649-149672793	4	+	149636649	149636649	16724991	6	67,236,320,123,104,215,	0,24204,29155,31650,32561,35929,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	149636765	149636929	chr1:149636765-149636929	3	+	149636765	149636765	8553170	1	164,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	149646598	149648388	chr1:149646598-149648388	4	+	149646598	149646598	16724991	2	56,1008,	0,782,
#Deleted in new
chr1	149646749	149647619	chr1:149646749-149647619	4	+	149646749	149646749	16724991	2	315,239,	0,631,
#Partially deleted in new
chr1	149655730	149669321	chr1:149655730-149669321	5	+	149655730	149655730	16724991	6	178,103,236,52,168,133,	0,2421,5123,9351,10226,13458,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	149675204	149677740	chr1:149675204-149677740	7	+	149675204	149675204	16724991	1	2536,	0,
#Partially deleted in new
chr1	149676850	149747818	chr1:149676850-149747818	7	-	149676850	149676850	16724991	5	798,167,188,236,148,	0,10584,50032,52527,70820,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	149700150	149700296	chr1:149700150-149700296	3	-	149700150	149700150	8553170	1	146,	0,
#Partially deleted in new
chr1	149720530	149734391	chr1:149720530-149734391	5	-	149720530	149720530	16724991	7	115,135,223,188,52,236,199,	0,881,2345,6352,7699,8847,13662,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	149722923	149747785	chr1:149722923-149747785	4	-	149722923	149722923	16724991	5	175,188,236,538,169,	0,3959,6454,23976,24693,
#Partially deleted in new
chr1	149722925	149727147	chr1:149722925-149727147	4	-	149722925	149722925	16724991	2	173,265,	0,3957,
#Partially deleted in new
chr1	149734010	149747777	chr1:149734010-149747777	4	-	149734010	149734010	16724991	3	372,312,84,	0,13115,13683,
#Partially deleted in new
chr1	149745615	149747787	chr1:149745615-149747787	4	-	149745615	149745615	16724991	3	228,538,94,	0,1284,2078,
#Deleted in new
chr1	149754300	149754710	chr1:149754300-149754710	7	-	149754300	149754300	16724991	1	410,	0,
#Partially deleted in new
chr1	149782670	149791390	chr1:149782670-149791390	0	+	149782743	149791390	789624	4	104,252,285,154,	0,5695,7383,8566,
#Partially deleted in new
chr1	149782688	149812373	chr1:149782688-149812373	1	-	149783232	149812323	789624	2	572,427,	0,29258,
#Partially deleted in new
chr1	149782689	149792518	chr1:149782689-149792518	3	+	149782743	149791517	0	6	85,21,255,252,285,1282,	0,480,1313,5676,7364,8547,
#Deleted in new
chr1	149782727	149783951	chr1:149782727-149783951	0	+	149782727	149782727	8553170	2	47,782,	0,442,
#Partially deleted in new
chr1	149782876	149811757	chr1:149782876-149811757	0	-	149782876	149782876	8553170	2	384,75,	0,28806,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	149785658	149793020	chr1:149785658-149793020	3	-	149785658	149785658	8553170	2	2480,1063,	0,6299,
#Deleted in new
chr1	149790367	149791675	chr1:149790367-149791675	0	+	149790367	149790367	8553170	2	38,439,	0,869,
#Partially deleted in new
chr1	149803601	149812338	chr1:149803601-149812338	0	-	149803601	149803601	8553170	2	360,392,	0,8345,
#Partially deleted in new
chr1	149805259	149812057	chr1:149805259-149812057	0	-	149805259	149805259	8553170	2	296,111,	0,6687,
#Partially deleted in new
chr1	149810405	149812359	chr1:149810405-149812359	3	-	149811942	149812323	789624	1	1954,	0,
#Partially deleted in new
chr1	149813270	149813681	chr1:149813270-149813681	3	-	149813270	149813681	0	1	411,	0,
#Deleted in new
chr1	149832658	149833241	chr1:149832658-149833241	3	+	149832684	149832996	0	1	583,	0,
#Deleted in new
chr1	149832667	149834484	chr1:149832667-149834484	0	+	149832684	149832996	0	2	1197,350,	0,1467,
#Deleted in new
chr1	149832669	149834631	chr1:149832669-149834631	0	+	149832684	149832996	0	2	445,497,	0,1465,
#Partially deleted in new
chr1	149832677	149839767	chr1:149832677-149839767	0	+	149832684	149832996	0	2	437,173,	0,6917,
#Deleted in new
chr1	149839537	149841193	chr1:149839537-149841193	3	-	149840746	149841157	0	1	1656,	0,
#Deleted in new
chr1	149842187	149842736	chr1:149842187-149842736	3	-	149842305	149842698	789624	1	549,	0,
#Deleted in new
chr1	149842874	149846486	chr1:149842874-149846486	7	+	149842874	149842874	16724991	1	3612,	0,
#Deleted in new
chr1	149843040	149843533	chr1:149843040-149843533	5	+	149843040	149843040	16724991	1	493,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	149844497	149850937	chr1:149844497-149850937	7	-	149844497	149844497	16724991	1	6440,	0,
#Deleted in new
chr1	149850192	149850772	chr1:149850192-149850772	5	-	149850192	149850192	16724991	1	580,	0,
#Deleted in new
chr1	149851060	149851624	chr1:149851060-149851624	3	+	149851113	149851506	789624	1	564,	0,
#Deleted in new
chr1	149852618	149854274	chr1:149852618-149854274	3	+	149852654	149853065	0	1	1656,	0,
#Partially deleted in new
chr1	149854044	149861138	chr1:149854044-149861138	0	-	149860819	149861131	0	2	173,437,	0,6657,
#Deleted in new
chr1	149859184	149861148	chr1:149859184-149861148	0	-	149860819	149861131	0	2	497,1197,	0,767,
#Deleted in new
chr1	149860078	149861210	chr1:149860078-149861210	3	-	149860819	149861131	0	1	1132,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	149861270	149862504	chr1:149861270-149862504	3	+	149861270	149861270	8553170	1	1234,	0,
#Deleted in new
chr1	149884458	149886652	chr1:149884458-149886652	3	-	149886259	149886640	0	1	2194,	0,
#Deleted in new
chr1	149886974	149887364	chr1:149886974-149887364	3	+	149886974	149887364	789624	1	390,	0,
#Deleted in new
chr1	149887523	149887916	chr1:149887523-149887916	3	-	149887523	149887916	789624	1	393,	0,
#Partially deleted in new
chr1	149887889	149900491	chr1:149887889-149900491	3	+	149900059	149900473	0	3	234,213,649,	0,11570,11953,
#Deleted in new
chr1	149899596	149900792	chr1:149899596-149900792	1	+	149900059	149900473	0	2	76,783,	0,413,
#Deleted in new
chr1	149899605	149900798	chr1:149899605-149900798	0	+	149899605	149899605	8553170	2	67,676,	0,517,
#Deleted in new
chr1	149899625	149900548	chr1:149899625-149900548	1	+	149900059	149900473	0	2	105,706,	0,217,
#Partially deleted in new
chr1	149903317	149917882	chr1:149903317-149917882	3	-	149905013	149913840	0	13	1880,160,207,134,165,89,111,90,134,152,181,969,144,	0,2562,3332,4382,4724,5874,6143,6483,7252,7508,8482,9901,14421,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	149905471	149917841	chr1:149905471-149917841	1	-	149905875	149913840	0	12	568,207,134,165,89,111,90,134,152,181,969,103,	0,1178,2228,2570,3720,3989,4329,5098,5354,6328,7747,12267,
#Partially deleted in new
chr1	149923316	149928344	chr1:149923316-149928344	3	-	149923541	149927759	0	6	413,174,207,543,129,619,	0,524,2519,3059,3849,4409,
#Deleted in new
chr1	149926381	149927591	chr1:149926381-149927591	0	-	149926381	149927199	789624	3	537,129,160,	0,784,1050,
#Partially deleted in new
chr1	149928650	149936825	chr1:149928650-149936825	0	-	149928650	149928650	8553170	10	667,294,183,174,136,79,143,61,76,115,	0,972,1714,2141,5540,5797,6335,6648,7503,8060,
#Partially deleted in new
chr1	149928650	149936869	chr1:149928650-149936869	0	-	149928650	149928650	8553170	15	667,294,183,174,71,67,125,333,136,79,143,61,122,220,159,	0,972,1714,2141,3293,3613,4755,4959,5540,5797,6335,6648,6933,7503,8060,
#Partially deleted in new
chr1	149928651	149936350	chr1:149928651-149936350	1	-	149928866	149936164	789624	17	250,163,294,183,174,167,71,67,125,89,88,136,79,143,61,37,197,	0,503,971,1713,2140,2608,3292,3612,4754,4958,5203,5539,5796,6334,6647,6932,7502,
#Partially deleted in new
chr1	149928651	149936867	chr1:149928651-149936867	3	-	149929128	149936647	789624	17	666,294,183,174,167,71,67,125,89,88,136,79,143,61,122,76,286,	0,971,1713,2140,2608,3292,3612,4754,4958,5203,5539,5796,6334,6647,6932,7502,7930,
#Partially deleted in new
chr1	149928651	149936834	chr1:149928651-149936834	0	-	149928651	149928651	8553170	9	1265,601,136,79,143,61,122,76,253,	0,1713,5539,5796,6334,6647,6932,7502,7930,
#Partially deleted in new
chr1	149928651	149936834	chr1:149928651-149936834	0	-	149928651	149928651	8553170	13	1265,601,71,67,125,333,136,79,143,61,122,76,253,	0,1713,3292,3612,4754,4958,5539,5796,6334,6647,6932,7502,7930,
#Deleted in new
chr1	149929673	149931592	chr1:149929673-149931592	0	-	149929673	149929673	8553170	4	243,183,174,333,	0,691,1118,1586,
#Deleted in new
chr1	149930076	149931387	chr1:149930076-149931387	0	-	149930076	149930076	8553170	2	471,596,	0,715,
#Partially deleted in new
chr1	149931367	149933907	chr1:149931367-149933907	0	-	149931367	149931367	8553170	5	59,71,67,125,298,	0,576,896,2038,2242,
#Deleted in new
chr1	149934182	149935486	chr1:149934182-149935486	0	-	149934182	149934182	8553170	4	144,79,143,188,	0,265,803,1116,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	149937811	150010676	chr1:149937811-150010676	3	-	149943856	149977510	0	12	7254,85,115,150,128,113,128,102,228,189,151,229,	0,9439,11157,11817,12282,21872,26410,27965,29482,33251,39614,72636,
#Partially deleted in new
chr1	149947290	150010675	chr1:149947290-150010675	0	-	149947290	149977510	789624	11	45,115,150,128,113,128,102,228,189,145,82,	0,1678,2338,2803,12393,16931,18486,20003,23772,30135,63303,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	149960926	149971261	chr1:149960926-149971261	0	-	149960926	149960926	8553170	4	3423,102,94,199,	0,4850,6367,10136,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	150045659	150067701	chr1:150045659-150067701	3	-	150045659	150045659	8553170	6	2286,97,59,176,104,219,	0,2795,4822,11768,12576,21823,
#Partially deleted in new
chr1	150053863	150055034	chr1:150053863-150055034	7	+	150053863	150053863	16724991	2	655,215,	0,956,
#Partially deleted in new
chr1	150067278	150145163	chr1:150067278-150145163	1	+	150068644	150144796	789624	15	328,135,61,80,69,138,111,135,114,168,159,108,122,132,455,	0,1351,4887,8954,9637,9815,10390,14063,14605,15437,24658,25023,26248,43217,77430,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	150067292	150145326	chr1:150067292-150145326	1	+	150068644	150144921	789624	14	658,135,61,80,111,135,114,168,159,108,122,132,94,618,	0,1337,4873,8940,10376,14049,14591,15423,24644,25009,26234,43203,75545,77416,
#Partially deleted in new
chr1	150067311	150145327	chr1:150067311-150145327	3	+	150067857	150144796	789624	15	639,135,61,80,69,138,111,135,114,168,159,108,122,132,619,	0,1318,4854,8921,9604,9782,10357,14030,14572,15404,24625,24990,26215,43184,77397,
#Partially deleted in new
chr1	150067347	150081926	chr1:150067347-150081926	0	+	150068644	150081424	789624	9	259,135,61,80,69,138,111,70,43,	0,1282,4818,8885,9568,9746,10321,14059,14536,
#Deleted in new
chr1	150067368	150068859	chr1:150067368-150068859	0	+	150067368	150067368	8553170	2	238,230,	0,1261,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	150067381	150145288	chr1:150067381-150145288	1	+	150068644	150144921	789624	14	225,135,61,80,111,135,114,168,159,108,122,132,94,580,	0,1248,4784,8851,10287,13960,14502,15334,24555,24920,26145,43114,75456,77327,
#Partially deleted in new
chr1	150067667	150145326	chr1:150067667-150145326	1	+	150067857	150144796	789624	12	220,39,138,111,135,114,168,159,108,122,132,618,	0,9278,9426,10001,13674,14216,15048,24269,24634,25859,42828,77041,
#Partially deleted in new
chr1	150067765	150077090	chr1:150067765-150077090	0	+	150067765	150067765	8553170	5	185,135,61,80,175,	0,864,4400,8467,9150,
#Partially deleted in new
chr1	150067775	150145329	chr1:150067775-150145329	1	+	150067857	150144796	789624	15	175,135,61,80,69,138,111,135,114,168,159,108,122,132,621,	0,854,4390,8457,9140,9318,9893,13566,14108,14940,24161,24526,25751,42720,76933,
#Deleted in new
chr1	150067798	150068859	chr1:150067798-150068859	1	+	150067857	150068821	789624	2	152,230,	0,831,
#Partially deleted in new
chr1	150067806	150145253	chr1:150067806-150145253	0	+	150067857	150098868	789624	14	144,135,61,80,111,135,114,168,159,108,122,231,132,545,	0,823,4359,8426,9862,13535,14077,14909,24130,24495,25720,31043,42689,76902,
#Partially deleted in new
chr1	150067808	150077029	chr1:150067808-150077029	0	+	150067808	150067808	8553170	4	142,135,61,797,	0,821,4357,8424,
#Partially deleted in new
chr1	150067812	150145210	chr1:150067812-150145210	0	+	150067857	150068639	789624	15	138,155,61,80,69,138,111,135,114,168,159,108,122,132,502,	0,797,4353,8420,9103,9281,9856,13529,14071,14903,24124,24489,25714,42683,76896,
#Partially deleted in new
chr1	150067846	150093628	chr1:150067846-150093628	0	+	150067857	150093628	789624	13	104,135,61,80,69,66,111,135,114,168,159,108,102,	0,783,4319,8386,9069,9319,9822,13495,14037,14869,24090,24455,25680,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	150067847	150145329	chr1:150067847-150145329	1	+	150067857	150144921	789624	16	103,135,61,80,69,138,111,135,114,168,159,108,122,132,94,621,	0,782,4318,8385,9068,9246,9821,13494,14036,14868,24089,24454,25679,42648,74990,76861,
#Partially deleted in new
chr1	150068028	150076264	chr1:150068028-150076264	0	+	150068028	150068028	8553170	4	328,135,61,32,	0,601,4137,8204,
#Partially deleted in new
chr1	150077188	150145304	chr1:150077188-150145304	0	+	150077188	150077188	8553170	9	591,135,114,168,159,108,122,132,596,	0,4153,4695,5527,14748,15113,16338,33307,67520,
#Partially deleted in new
chr1	150077734	150083307	chr1:150077734-150083307	0	+	150077734	150082898	789624	4	45,135,114,592,	0,3607,4149,4981,
#Deleted in new
chr1	150092004	150092562	chr1:150092004-150092562	0	+	150092004	150092004	8553170	2	91,261,	0,297,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	150109174	150144925	chr1:150109174-150144925	0	+	150109174	150109174	8553170	2	1453,217,	0,35534,
#Partially deleted in new
chr1	150149182	150159630	chr1:150149182-150159630	1	+	150158842	150159523	789624	5	604,147,141,105,812,	0,1729,6883,7728,9636,
#Partially deleted in new
chr1	150149979	150160065	chr1:150149979-150160065	3	+	150150257	150159523	0	6	308,147,141,105,102,1247,	0,932,6086,6931,7405,8839,
#Partially deleted in new
chr1	150150606	150159043	chr1:150150606-150159043	0	+	150150606	150150606	8553170	5	452,141,105,102,225,	0,5459,6304,6778,8212,
#Partially deleted in new
chr1	150150636	150153023	chr1:150150636-150153023	0	+	150150636	150150636	8553170	2	422,263,	0,2124,
#Partially deleted in new
chr1	150153482	150159628	chr1:150153482-150159628	0	+	150153482	150153482	8553170	4	2724,105,102,810,	0,3428,3902,5336,
#Deleted in new
chr1	150155789	150157195	chr1:150155789-150157195	0	+	150155789	150155789	8553170	2	417,285,	0,1121,
#Partially deleted in new
chr1	150156928	150159324	chr1:150156928-150159324	0	+	150156928	150156928	8553170	3	87,115,506,	0,443,1890,
#Partially deleted in new
chr1	150157016	150158986	chr1:150157016-150158986	0	+	150157016	150157016	8553170	2	470,168,	0,1802,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	150159404	150164720	chr1:150159404-150164720	0	+	150159404	150159404	8553170	3	93,107,284,	0,4791,5032,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	150173048	150181429	chr1:150173048-150181429	3	+	150173048	150173048	8553170	3	552,85,518,	0,681,7863,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	150211631	150211925	chr1:150211631-150211925	3	+	150211631	150211631	8553170	1	294,	0,
#Partially deleted in new
chr1	150218416	150236156	chr1:150218416-150236156	3	-	150220690	150235786	0	7	2345,55,188,166,123,150,424,	0,4769,8191,10655,12154,13360,17316,
#Partially deleted in new
chr1	150218417	150236156	chr1:150218417-150236156	1	-	150220690	150235786	789624	5	2344,55,188,43,424,	0,4768,8190,10654,17315,
#Partially deleted in new
chr1	150218554	150234678	chr1:150218554-150234678	1	-	150220690	150231836	0	7	2207,55,188,166,123,150,100,	0,4631,8053,10517,12016,13222,16024,
#Partially deleted in new
chr1	150220271	150236022	chr1:150220271-150236022	1	-	150220690	150235786	0	6	490,55,188,166,150,290,	0,2914,6336,8800,11505,15461,
#Partially deleted in new
chr1	150220377	150226730	chr1:150220377-150226730	0	-	150220690	150226730	789624	3	384,109,123,	0,2808,6230,
#Partially deleted in new
chr1	150220391	150236085	chr1:150220391-150236085	1	-	150220690	150235786	789624	5	367,55,123,150,353,	0,2794,10179,11385,15341,
#Partially deleted in new
chr1	150220460	150236099	chr1:150220460-150236099	1	-	150220690	150235786	789624	6	301,55,188,43,97,24,	0,2725,6147,8611,15272,15615,
#Partially deleted in new
chr1	150220537	150235955	chr1:150220537-150235955	1	-	150226624	150235786	789624	5	224,188,123,150,223,	0,6070,10033,11239,15195,
#Partially deleted in new
chr1	150226607	150235983	chr1:150226607-150235983	0	-	150226607	150235786	789624	3	188,73,251,	0,2464,9125,
#Partially deleted in new
chr1	150229071	150236064	chr1:150229071-150236064	0	-	150229071	150235786	789624	3	166,123,332,	0,1499,6661,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	150236966	150237156	chr1:150236966-150237156	3	+	150236966	150236966	8553170	1	190,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	150255094	150257286	chr1:150255094-150257286	3	-	150255094	150255094	8553170	2	661,53,	0,2139,
#Partially deleted in new
chr1	150257158	150265078	chr1:150257158-150265078	3	+	150258128	150264659	0	11	1025,21,180,143,96,67,158,121,21,85,486,	0,2992,4300,4999,5366,5645,5883,6140,6500,6635,7434,
#Partially deleted in new
chr1	150257250	150265049	chr1:150257250-150265049	1	+	150258128	150264659	789624	12	78,104,21,180,143,96,67,158,121,21,85,457,	0,829,2900,4208,4907,5274,5553,5791,6048,6408,6543,7342,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	150257850	150261331	chr1:150257850-150261331	0	+	150257850	150257850	8553170	2	333,1181,	0,2300,
#Partially deleted in new
chr1	150257874	150263831	chr1:150257874-150263831	0	+	150257874	150257874	8553170	8	309,98,61,143,96,616,21,38,	0,2276,3703,4283,4650,4929,5784,5919,
#Partially deleted in new
chr1	150258093	150263376	chr1:150258093-150263376	0	+	150258128	150260335	789624	9	90,21,105,180,143,96,67,158,78,	0,2057,2189,3365,4064,4431,4710,4948,5205,
#Partially deleted in new
chr1	150263043	150264891	chr1:150263043-150264891	0	+	150263043	150264690	789624	4	156,121,18,299,	0,255,618,1549,
#Deleted in new
chr1	150265398	150269209	chr1:150265398-150269209	1	-	150266129	150268810	0	6	796,124,128,123,35,512,	0,1134,1676,1957,2558,3299,
#Deleted in new
chr1	150265403	150268999	chr1:150265403-150268999	3	-	150266129	150268810	0	7	791,124,128,123,74,171,302,	0,1129,1671,1952,2312,2553,3294,
#Deleted in new
chr1	150265405	150269303	chr1:150265405-150269303	1	-	150266521	150268810	0	6	1251,128,123,74,171,606,	0,1669,1950,2310,2551,3292,
#Deleted in new
chr1	150266348	150269015	chr1:150266348-150269015	0	-	150266348	150266348	8553170	6	308,180,123,74,35,318,	0,726,1007,1367,1608,2349,
#Deleted in new
chr1	150266644	150269023	chr1:150266644-150269023	0	-	150266644	150268810	789624	5	12,128,123,74,326,	0,430,711,1071,2053,
#Deleted in new
chr1	150266955	150267766	chr1:150266955-150267766	0	-	150266955	150266955	8553170	2	523,51,	0,760,
#Deleted in new
chr1	150267096	150267696	chr1:150267096-150267696	0	-	150267096	150267096	8553170	2	106,341,	0,259,
#Deleted in new
chr1	150267369	150268566	chr1:150267369-150268566	0	-	150267369	150267369	8553170	3	109,74,610,	0,346,587,
#Partially deleted in new
chr1	150268199	150280916	chr1:150268199-150280916	3	+	150272817	150279738	789624	8	621,130,65,84,59,111,99,82,	0,4084,4599,5887,7541,8322,11443,12635,
#Deleted in new
chr1	150268900	150269580	chr1:150268900-150269580	0	-	150268900	150268900	8553170	2	401,184,	0,496,
#Partially deleted in new
chr1	150272698	150280916	chr1:150272698-150280916	1	+	150272817	150279738	789624	6	165,84,59,111,99,82,	0,1388,3042,3823,6944,8136,
#Partially deleted in new
chr1	150272779	150280914	chr1:150272779-150280914	1	+	150272817	150280900	789624	5	84,84,59,111,80,	0,1307,2961,3742,8055,
#Partially deleted in new
chr1	150282542	150287093	chr1:150282542-150287093	1	+	150283531	150286954	789624	6	76,172,76,79,112,664,	0,919,1262,1883,2054,3887,
#Partially deleted in new
chr1	150282542	150287093	chr1:150282542-150287093	3	+	150283267	150286954	789624	6	76,426,76,79,112,664,	0,665,1262,1883,2054,3887,
#Partially deleted in new
chr1	150282542	150286737	chr1:150282542-150286737	0	+	150283531	150286737	789624	6	76,120,76,79,112,308,	0,971,1262,1883,2054,3887,
#Partially deleted in new
chr1	150282771	150286776	chr1:150282771-150286776	0	+	150283531	150286776	789624	6	52,172,76,79,112,347,	0,690,1033,1654,1825,3658,
#Partially deleted in new
chr1	150282818	150287093	chr1:150282818-150287093	1	+	150283267	150286954	789624	5	815,76,79,112,664,	0,986,1607,1778,3611,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	150282848	150285535	chr1:150282848-150285535	0	+	150282848	150282848	8553170	3	785,79,939,	0,1577,1748,
#Partially deleted in new
chr1	150283533	150286633	chr1:150283533-150286633	0	+	150283533	150283533	8553170	4	100,79,112,204,	0,892,1063,2896,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	150293719	150308979	chr1:150293719-150308979	3	+	150294366	150308228	0	3	179,115,932,	0,615,14328,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	150293919	150308979	chr1:150293919-150308979	1	+	150294366	150308228	0	2	530,932,	0,14128,
#Partially deleted in new
chr1	150321475	150353195	chr1:150321475-150353195	3	+	150324942	150352979	0	16	117,193,131,147,84,221,307,167,80,144,100,114,119,84,62,363,	0,3419,4275,6844,11208,11503,13459,16684,18922,21833,22686,22958,24542,24932,27681,31357,
#Partially deleted in new
chr1	150321478	150335030	chr1:150321478-150335030	0	+	150321478	150321478	8553170	8	114,193,131,96,147,84,221,96,	0,3416,4272,6078,6841,11205,11500,13456,
#Partially deleted in new
chr1	150327774	150353195	chr1:150327774-150353195	0	+	150327774	150327774	8553170	13	692,84,221,307,167,80,144,100,172,119,84,62,363,	0,4909,5204,7160,10385,12623,15534,16387,16601,18243,18633,21382,25058,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	150329751	150334979	chr1:150329751-150334979	0	+	150329751	150329751	8553170	4	747,84,221,45,	0,2932,3227,5183,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	150343150	150344375	chr1:150343150-150344375	0	+	150343150	150343150	8553170	2	302,214,	0,1011,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	150345539	150349209	chr1:150345539-150349209	0	+	150345539	150345539	8553170	2	952,53,	0,3617,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	150348683	150353195	chr1:150348683-150353195	0	+	150348683	150348683	8553170	2	535,363,	0,4149,
#Partially deleted in new
chr1	150363090	150473556	chr1:150363090-150473556	0	+	150363090	150363090	8553170	11	308,147,130,101,53,127,176,283,258,201,2996,	0,45815,54505,77832,80140,81160,83135,94197,96969,101436,107470,
#Partially deleted in new
chr1	150364649	150476566	chr1:150364649-150476566	1	+	150364714	150473334	0	10	270,130,101,53,127,176,283,258,201,6006,	0,52946,76273,78581,79601,81576,92638,95410,99877,105911,
#Partially deleted in new
chr1	150364707	150441623	chr1:150364707-150441623	1	+	150364714	150441046	0	3	212,130,701,	0,52888,76215,
#Partially deleted in new
chr1	150364710	150473556	chr1:150364710-150473556	3	+	150364714	150473334	0	11	209,130,101,78,53,127,176,283,258,201,2996,	0,52885,76212,77170,78520,79540,81515,92577,95349,99816,105850,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	150487363	150507609	chr1:150487363-150507609	1	+	150488015	150507064	789624	14	153,197,23,54,79,218,163,138,78,101,102,73,115,694,	0,494,1600,3308,5047,10166,11138,11533,11852,16971,17268,17542,18227,19552,
#Partially deleted in new
chr1	150487413	150507258	chr1:150487413-150507258	1	+	150487450	150507064	789624	14	103,197,124,125,118,218,163,138,78,101,102,73,115,343,	0,444,1550,3187,3980,10116,11088,11483,11802,16921,17218,17492,18177,19502,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	150487416	150507602	chr1:150487416-150507602	3	+	150487450	150507064	789624	18	100,197,124,125,118,65,79,147,99,218,163,138,78,101,102,73,115,687,	0,441,1547,3184,3977,4181,4994,9065,9393,10113,11085,11480,11799,16918,17215,17489,18174,19499,
#Partially deleted in new
chr1	150487419	150507284	chr1:150487419-150507284	1	+	150487450	150507064	789624	16	97,197,124,125,118,65,79,218,163,138,78,101,102,73,115,369,	0,438,1544,3181,3974,4178,4991,10110,11082,11477,11796,16915,17212,17486,18171,19496,
#Partially deleted in new
chr1	150487430	150489308	chr1:150487430-150489308	0	+	150487430	150487430	8553170	3	86,197,345,	0,427,1533,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	150487434	150507598	chr1:150487434-150507598	0	+	150487450	150492478	789624	14	82,197,25,52,79,218,163,138,78,101,102,73,115,683,	0,423,1529,3239,4976,10095,11067,11462,11781,16900,17197,17471,18156,19481,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	150487441	150488632	chr1:150487441-150488632	0	+	150487441	150487441	8553170	2	75,775,	0,416,
#Partially deleted in new
chr1	150487869	150507183	chr1:150487869-150507183	0	+	150487869	150491602	789624	15	185,124,118,65,79,147,99,163,138,78,101,102,73,115,268,	0,1094,3524,3728,4541,8612,8940,10632,11027,11346,16465,16762,17036,17721,19046,
#Partially deleted in new
chr1	150487990	150491718	chr1:150487990-150491718	0	+	150487990	150487990	8553170	4	64,124,118,121,	0,973,3403,3607,
#Partially deleted in new
chr1	150491457	150504436	chr1:150491457-150504436	0	+	150491457	150491457	8553170	7	54,79,218,163,138,78,102,	0,953,6072,7044,7439,7758,12877,
#Partially deleted in new
chr1	150491588	150504436	chr1:150491588-150504436	0	+	150491588	150491588	8553170	7	74,79,218,163,138,78,102,	0,822,5941,6913,7308,7627,12746,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	150491989	150497597	chr1:150491989-150497597	0	+	150491989	150491989	8553170	2	500,68,	0,5540,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	150492184	150497587	chr1:150492184-150497587	0	+	150492184	150492184	8553170	4	305,147,99,58,	0,4297,4625,5345,
#Partially deleted in new
chr1	150492344	150492410	chr1:150492344-150492410	3	+	150492344	150492344	5263520	1	66,	0,
#Deleted in new
chr1	150504332	150506935	chr1:150504332-150506935	0	+	150504332	150504332	8553170	4	103,73,115,20,	0,573,1258,2583,
#Deleted in new
chr1	150508061	150513553	chr1:150508061-150513553	0	+	150508061	150508061	8553170	6	218,51,2171,221,88,317,	0,1469,1599,4290,4663,5175,
#Deleted in new
chr1	150508075	150513554	chr1:150508075-150513554	1	+	150508209	150513467	789624	10	204,51,96,168,81,323,375,221,88,318,	0,1455,1585,1759,2026,2800,3381,4276,4649,5161,
#Deleted in new
chr1	150508081	150511146	chr1:150508081-150511146	0	+	150508081	150508081	8553170	5	198,51,342,81,271,	0,1449,1579,2020,2794,
#Deleted in new
chr1	150508084	150513789	chr1:150508084-150513789	3	+	150508209	150513467	789624	10	195,51,102,81,81,323,375,221,88,553,	0,1446,1576,1837,2017,2791,3372,4267,4640,5152,
#Deleted in new
chr1	150508093	150510552	chr1:150508093-150510552	0	+	150508093	150508093	8553170	4	186,51,342,451,	0,1437,1567,2008,
#Deleted in new
chr1	150508106	150513560	chr1:150508106-150513560	1	+	150508209	150513467	789624	9	173,51,102,81,81,323,221,88,324,	0,1424,1554,1815,1995,2769,4245,4618,5130,
#Deleted in new
chr1	150509301	150510152	chr1:150509301-150510152	0	+	150509301	150509301	8553170	4	58,51,342,51,	0,229,359,800,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	150515756	150518032	chr1:150515756-150518032	3	+	150515756	150515756	789624	2	306,260,	0,2016,
#Partially deleted in new
chr1	150548561	150557724	chr1:150548561-150557724	3	-	150548561	150548561	8553170	6	189,198,99,70,77,32,	0,5973,7392,7586,8046,9131,
#Partially deleted in new
chr1	150549368	150560932	chr1:150549368-150560932	3	+	150552288	150560196	789624	19	131,74,104,58,356,697,103,137,205,173,112,186,130,205,177,204,180,145,873,	0,453,2836,3174,3529,4057,4996,6060,6793,7252,7570,7781,8125,8576,9104,9593,9918,10392,10691,
#Partially deleted in new
chr1	150549368	150560932	chr1:150549368-150560932	1	+	150552288	150560196	789624	20	131,74,104,58,356,697,103,69,137,205,173,112,186,130,205,177,204,180,145,873,	0,453,2836,3174,3529,4057,4996,5197,6060,6793,7252,7570,7781,8125,8576,9104,9593,9918,10392,10691,
#Partially deleted in new
chr1	150549407	150558748	chr1:150549407-150558748	1	+	150552288	150558724	789624	15	92,74,104,58,356,697,103,137,205,173,112,186,130,205,276,	0,414,2797,3135,3490,4018,4957,6021,6754,7213,7531,7742,8086,8537,9065,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	150549420	150551906	chr1:150549420-150551906	0	+	150549420	150549420	8553170	3	79,455,1292,	0,401,1194,
#Deleted in new
chr1	150551928	150552014	chr1:150551928-150552014	3	+	150551928	150551928	5263520	1	86,	0,
#Partially deleted in new
chr1	150552087	150560937	chr1:150552087-150560937	1	+	150552288	150560196	789624	17	221,58,356,697,103,137,205,173,112,186,130,205,177,204,180,145,878,	0,455,810,1338,2277,3341,4074,4533,4851,5062,5406,5857,6385,6874,7199,7673,7972,
#Deleted in new
chr1	150558253	150560937	chr1:150558253-150560937	0	+	150558253	150558253	8553170	5	396,204,180,145,878,	0,708,1033,1507,1806,
#Deleted in new
chr1	150560201	150562115	chr1:150560201-150562115	0	-	150560201	150560201	8553170	1	1914,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	150560894	150574552	chr1:150560894-150574552	3	-	150560894	150560894	789624	4	328,116,163,429,	0,2207,12764,13229,
#Deleted in new
chr1	150561003	150561493	chr1:150561003-150561493	0	-	150561003	150561003	8553170	1	490,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	150566561	150566860	chr1:150566561-150566860	3	-	150566561	150566561	8553170	1	299,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	150568970	150569269	chr1:150568970-150569269	3	-	150568970	150568970	8553170	1	299,	0,
#Partially deleted in new
chr1	150574550	150579738	chr1:150574550-150579738	1	-	150577374	150579530	789624	4	2941,248,121,316,	0,3693,4292,4872,
#Partially deleted in new
chr1	150574555	150579590	chr1:150574555-150579590	3	-	150577374	150579530	0	3	2936,248,748,	0,3688,4287,
#Partially deleted in new
chr1	150576926	150578777	chr1:150576926-150578777	0	-	150576926	150576926	8553170	2	565,534,	0,1317,
#Partially deleted in new
chr1	150577069	150579530	chr1:150577069-150579530	1	-	150577363	150579530	0	2	422,688,	0,1773,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	150600538	150600659	chr1:150600538-150600659	3	-	150600538	150600538	8553170	1	121,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	150600850	150629566	chr1:150600850-150629566	1	-	150601113	150629470	789624	5	429,167,48,126,153,	0,24791,25628,26616,28563,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	150608506	150608623	chr1:150608506-150608623	3	-	150608506	150608506	8553170	1	117,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	150621250	150629596	chr1:150621250-150629596	3	-	150622843	150629470	789624	4	1609,167,126,183,	0,4391,6216,8163,
#Partially deleted in new
chr1	150622440	150629140	chr1:150622440-150629140	1	-	150622843	150629105	789624	4	419,167,126,80,	0,3201,5026,6620,
#Partially deleted in new
chr1	150622543	150629128	chr1:150622543-150629128	1	-	150622843	150629105	789624	5	316,167,48,126,68,	0,3098,3935,4923,6517,
#Partially deleted in new
chr1	150622728	150629502	chr1:150622728-150629502	0	-	150627331	150629470	789624	5	131,167,48,281,89,	0,2913,3750,4583,6685,
#Partially deleted in new
chr1	150622730	150629576	chr1:150622730-150629576	1	-	150622843	150629470	789624	5	129,167,48,126,163,	0,2911,3748,4736,6683,
#Partially deleted in new
chr1	150622843	150629470	chr1:150622843-150629470	1	-	150622843	150629470	789624	4	16,161,126,57,	0,2798,4623,6570,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	150623280	150629577	chr1:150623280-150629577	1	-	150625637	150629470	789624	3	2528,126,164,	0,4186,6133,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	150623621	150629577	chr1:150623621-150629577	1	-	150625637	150629470	789624	3	2187,195,164,	0,3776,5792,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	150624621	150629116	chr1:150624621-150629116	1	-	150625637	150629105	789624	3	1187,126,56,	0,2845,4439,
#Partially deleted in new
chr1	150625199	150629612	chr1:150625199-150629612	0	-	150625199	150625199	8553170	2	489,63,	0,4350,
#Partially deleted in new
chr1	150625464	150629581	chr1:150625464-150629581	1	-	150627331	150629470	789624	3	344,281,168,	0,1847,3949,
#Partially deleted in new
chr1	150625505	150629139	chr1:150625505-150629139	0	-	150625505	150625505	8553170	3	303,126,140,	0,1961,3494,
#Partially deleted in new
chr1	150625554	150629559	chr1:150625554-150629559	1	-	150625637	150629470	789624	4	254,48,126,146,	0,924,1912,3859,
#Partially deleted in new
chr1	150627053	150629577	chr1:150627053-150629577	1	-	150627331	150629470	789624	2	539,164,	0,2360,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	150646224	150697024	chr1:150646224-150697024	3	-	150648320	150694838	789624	5	2524,115,132,195,33,	0,15589,17407,48431,50767,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	150648436	150697144	chr1:150648436-150697144	0	-	150648436	150694838	789624	6	312,115,132,66,195,153,	0,13377,15195,45671,46219,48555,
#Partially deleted in new
chr1	150694511	150697108	chr1:150694511-150697108	0	-	150694511	150694511	8553170	2	339,117,	0,2480,
#Partially deleted in new
chr1	150698059	150720876	chr1:150698059-150720876	1	-	150698653	150717166	789624	13	675,72,84,77,67,257,152,68,21,37,145,66,73,	0,2052,5250,6058,6217,8493,10196,10834,13773,16025,19078,21413,22744,
#Partially deleted in new
chr1	150698161	150720885	chr1:150698161-150720885	1	-	150698653	150719505	789624	14	573,72,84,77,67,257,152,68,27,37,64,145,66,82,	0,1950,5148,5956,6115,8391,10094,10732,13383,15923,16453,18976,21311,22642,
#Partially deleted in new
chr1	150698252	150720876	chr1:150698252-150720876	3	-	150698653	150719505	789624	15	482,72,84,77,67,257,152,68,27,21,37,64,145,66,73,	0,1859,5057,5865,6024,8300,10003,10641,13292,13580,15832,16362,18885,21220,22551,
#Partially deleted in new
chr1	150698390	150704307	chr1:150698390-150704307	0	-	150698390	150698390	8553170	6	344,112,72,84,77,31,	0,463,1721,4919,5727,5886,
#Partially deleted in new
chr1	150698553	150706823	chr1:150698553-150706823	0	-	150698553	150698553	8553170	5	181,84,77,67,271,	0,4756,5564,5723,7999,
#Partially deleted in new
chr1	150706571	150720840	chr1:150706571-150720840	0	-	150706571	150717166	789624	9	238,152,68,27,21,37,145,66,37,	0,1684,2322,4973,5261,7513,10566,12901,14232,
#Partially deleted in new
chr1	150706629	150720868	chr1:150706629-150720868	0	-	150706629	150717166	789624	8	180,152,68,27,37,145,66,65,	0,1626,2264,4915,7455,10508,12843,14174,
#Partially deleted in new
chr1	150713727	150720888	chr1:150713727-150720888	0	-	150713727	150713727	8553170	5	394,64,170,66,85,	0,887,3410,5745,7076,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	150730195	150765957	chr1:150730195-150765957	3	-	150733045	150764763	0	8	2950,103,166,228,150,123,127,260,	0,17581,19810,21585,24805,27662,34442,35502,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	150730881	150750091	chr1:150730881-150750091	0	-	150733045	150750091	789624	4	253,231,103,86,	0,2033,16895,19124,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	150730885	150733062	chr1:150730885-150733062	0	-	150733045	150733062	8553170	2	235,155,	0,2022,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	150732566	150765792	chr1:150732566-150765792	1	-	150733045	150764763	0	7	579,103,166,228,123,127,95,	0,15210,17439,19214,25291,32071,33131,
#Partially deleted in new
chr1	150747795	150764702	chr1:150747795-150764702	0	-	150747795	150747795	8553170	5	84,228,150,123,65,	0,3985,7205,10062,16842,
#Deleted in new
chr1	150780271	150780644	chr1:150780271-150780644	7	+	150780271	150780271	16724991	1	373,	0,
#Partially deleted in new
chr1	150796207	150808323	chr1:150796207-150808323	3	-	150796798	150806805	0	8	691,106,166,219,156,123,121,110,	0,2960,3336,7813,9653,9894,10478,12006,
#Partially deleted in new
chr1	150800472	150801031	chr1:150800472-150801031	7	+	150800472	150800472	16724991	2	211,214,	0,345,
#Partially deleted in new
chr1	150804011	150806768	chr1:150804011-150806768	0	-	150804011	150804011	8553170	3	228,156,83,	0,1849,2674,
#Partially deleted in new
chr1	150804040	150807434	chr1:150804040-150807434	0	-	150804040	150807424	789624	5	199,156,123,121,186,	0,1820,2061,2645,3208,
#Partially deleted in new
chr1	150809704	150876768	chr1:150809704-150876768	3	-	150812020	150876567	0	22	2406,167,163,148,103,121,73,111,152,75,135,77,86,66,103,214,214,45,45,45,112,226,	0,3467,4372,6554,7083,7377,7656,8215,13489,16838,19388,20199,22113,22629,24833,26575,29736,32719,36558,43057,48644,66838,
#Partially deleted in new
chr1	150810093	150876705	chr1:150810093-150876705	0	-	150818021	150876567	789624	17	2017,167,36,103,75,135,77,86,66,103,214,214,45,45,45,112,163,	0,3078,3983,7834,16449,18999,19810,21724,22240,24444,26186,29347,32330,36169,42668,48255,66449,
#Partially deleted in new
chr1	150810858	150876579	chr1:150810858-150876579	1	-	150812020	150876567	0	22	1252,167,163,142,103,121,73,111,152,75,135,77,86,66,103,214,214,45,45,45,112,37,	0,2313,3218,5400,5929,6223,6502,7061,12335,15684,18234,19045,20959,21475,23679,25421,28582,31565,35404,41903,47490,65684,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr1	150811680	150876708	chr1:150811680-150876708	1	-	150812020	150858458	0	23	430,167,163,148,103,121,73,111,152,75,135,62,86,66,103,214,214,45,45,45,112,56,166,	0,1491,2396,4578,5107,5401,5680,6239,11513,14862,17412,18223,20137,20653,22857,24599,27760,30743,34582,41081,46668,49566,64862,
#Partially deleted in new
chr1	150811960	150876609	chr1:150811960-150876609	1	-	150812020	150876567	0	21	150,167,163,148,103,121,73,111,152,75,135,77,86,66,103,214,214,45,45,112,67,	0,1211,2116,4298,4827,5121,5400,5959,11233,14582,17132,17943,19857,20373,22577,24319,27480,34302,40801,46388,64582,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	150812590	150812698	chr1:150812590-150812698	3	-	150812590	150812590	8553170	1	108,	0,
#Partially deleted in new
chr1	150817393	150818441	chr1:150817393-150818441	0	-	150817393	150817393	8553170	2	40,522,	0,526,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	150829109	150830382	chr1:150829109-150830382	0	-	150829109	150829109	8553170	2	118,479,	0,794,
#Partially deleted in new
chr1	150829908	150834863	chr1:150829908-150834863	0	-	150829908	150829908	8553170	4	72,86,66,326,	0,1909,2425,4629,
#Partially deleted in new
chr1	150831485	150836499	chr1:150831485-150836499	0	-	150831485	150831485	8553170	4	418,66,103,220,	0,848,3052,4794,
#Partially deleted in new
chr1	150836423	150876568	chr1:150836423-150876568	0	-	150836423	150836423	8553170	6	70,214,45,79,112,26,	0,3017,9839,16338,21925,40119,
#Partially deleted in new
chr1	150839398	150876609	chr1:150839398-150876609	0	-	150839398	150839398	8553170	6	256,45,45,45,112,67,	0,3025,6864,13363,18950,37144,
#Deleted in new
chr1	150881235	150881683	chr1:150881235-150881683	7	-	150881235	150881235	16724991	1	448,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	150887135	150913292	chr1:150887135-150913292	3	+	150912314	150912482	789624	2	178,1051,	0,25106,
#Deleted in new
chr1	150903895	150904213	chr1:150903895-150904213	7	+	150903895	150903895	16724991	1	318,	0,
#Partially deleted in new
chr1	150926262	150941377	chr1:150926262-150941377	0	+	150926262	150926262	8553170	4	86,271,152,49,	0,1441,3704,15066,
#Partially deleted in new
chr1	150926262	150941371	chr1:150926262-150941371	0	+	150927714	150941371	789624	5	86,271,152,35,43,	0,1441,3704,13677,15066,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	150926304	150928229	chr1:150926304-150928229	0	+	150926304	150926304	8553170	2	44,526,	0,1399,
#Partially deleted in new
chr1	150926338	150964735	chr1:150926338-150964735	1	+	150927714	150964364	0	22	179,271,152,35,100,126,202,74,191,127,157,156,633,117,170,629,29,133,166,212,89,489,	0,1365,3628,13601,14990,16224,16513,17581,18579,20547,22783,23031,24119,25026,32839,34224,35791,36248,36635,37191,37656,37908,
#Partially deleted in new
chr1	150926344	150941351	chr1:150926344-150941351	0	+	150927714	150941351	789624	5	187,271,152,35,23,	0,1359,3622,13595,14984,
#Partially deleted in new
chr1	150926348	150945320	chr1:150926348-150945320	1	+	150927714	150945162	0	9	115,271,152,35,100,126,202,74,403,	0,1355,3618,13591,14980,16214,16503,17571,18569,
#Partially deleted in new
chr1	150926394	150950783	chr1:150926394-150950783	0	+	150927714	150950783	789624	13	123,271,152,35,100,126,202,74,191,127,157,159,326,	0,1309,3572,13545,14934,16168,16457,17525,18523,20491,22727,22972,24063,
#Partially deleted in new
chr1	150926411	150964744	chr1:150926411-150964744	3	+	150927714	150964364	0	22	106,271,152,35,100,126,202,74,191,127,157,156,633,117,170,629,29,133,166,212,89,495,	0,1292,3555,13528,14917,16151,16440,17508,18506,20474,22710,22958,24046,24953,32766,34151,35718,36175,36562,37118,37583,37838,
#Partially deleted in new
chr1	150926423	150945110	chr1:150926423-150945110	1	+	150927714	150944920	789624	8	94,271,152,35,100,126,74,193,	0,1280,3543,13516,14905,16139,17496,18494,
#Partially deleted in new
chr1	150926423	150960890	chr1:150926423-150960890	0	+	150926423	150926423	8553170	4	40,271,152,328,	0,1280,3543,34139,
#Partially deleted in new
chr1	150926480	150963851	chr1:150926480-150963851	0	+	150927714	150963851	789624	20	64,271,152,35,100,126,202,74,191,127,157,156,633,117,170,629,29,133,166,322,	0,1223,3486,13459,14848,16082,16371,17439,18437,20405,22641,22889,23977,24884,32697,34082,35649,36106,36493,37049,
#Partially deleted in new
chr1	150926486	150941418	chr1:150926486-150941418	0	+	150927714	150930073	789624	5	31,271,121,35,90,	0,1217,3511,13453,14842,
#Partially deleted in new
chr1	150926639	150930116	chr1:150926639-150930116	0	+	150926777	150930116	789624	3	169,271,150,	0,1064,3327,
#Partially deleted in new
chr1	150927841	150930456	chr1:150927841-150930456	0	+	150927841	150927841	8553170	2	133,490,	0,2125,
#Partially deleted in new
chr1	150960582	150967631	chr1:150960582-150967631	0	-	150960582	150960582	8553170	7	173,187,290,127,154,447,240,	0,2375,3691,5579,5893,6173,6809,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	150961316	150964735	chr1:150961316-150964735	0	+	150961316	150961316	8553170	5	842,133,768,89,489,	0,1270,1657,2678,2930,
#Partially deleted in new
chr1	150962127	150963082	chr1:150962127-150963082	0	+	150962127	150962127	8553170	2	31,496,	0,459,
#Deleted in new
chr1	150962973	150963848	chr1:150962973-150963848	0	+	150962973	150962973	8553170	2	166,319,	0,556,
#Partially deleted in new
chr1	150963669	150969112	chr1:150963669-150969112	1	-	150964316	150969090	789624	10	806,154,107,129,93,51,58,92,118,195,	0,2806,3086,3404,3722,3994,4150,4413,4725,5248,
#Partially deleted in new
chr1	150965172	150975003	chr1:150965172-150975003	1	-	150966147	150969090	789624	11	1116,154,107,129,93,51,58,119,118,214,385,	0,1303,1583,1901,2219,2491,2647,2910,3222,3745,9446,
#Partially deleted in new
chr1	150965172	150974843	chr1:150965172-150974843	0	-	150965172	150965172	8553170	10	1116,154,107,129,93,51,58,119,118,225,	0,1303,1583,1901,2219,2491,2647,2910,3222,9446,
#Partially deleted in new
chr1	150965172	150975004	chr1:150965172-150975004	3	-	150966147	150969090	789624	11	1116,154,107,129,93,51,58,119,118,174,386,	0,1303,1583,1901,2219,2491,2647,2910,3222,3745,9446,
#Deleted in new
chr1	150965172	150967725	chr1:150965172-150967725	0	-	150966147	150967725	789624	6	1116,154,107,129,93,62,	0,1303,1583,1901,2219,2491,
#Deleted in new
chr1	150965244	150965963	chr1:150965244-150965963	0	+	150965244	150965244	8553170	2	499,132,	0,587,
#Deleted in new
chr1	150965248	150966256	chr1:150965248-150966256	3	+	150965248	150965248	8553170	2	516,126,	0,882,
#Deleted in new
chr1	150966486	150968172	chr1:150966486-150968172	0	-	150966486	150966486	8553170	6	143,107,129,323,58,90,	0,269,587,905,1333,1596,
#Partially deleted in new
chr1	150966563	150971935	chr1:150966563-150971935	0	-	150966563	150969090	789624	10	66,107,129,93,51,58,119,118,174,87,	0,192,510,828,1100,1256,1519,1831,2354,5285,
#Partially deleted in new
chr1	150967066	150974826	chr1:150967066-150974826	0	-	150967066	150969090	789624	8	136,93,51,58,119,118,214,208,	0,325,597,753,1016,1328,1851,7552,
#Deleted in new
chr1	150967130	150968132	chr1:150967130-150968132	0	-	150967130	150967130	8553170	4	72,93,27,50,	0,261,533,952,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	150967146	150969318	chr1:150967146-150969318	0	-	150967146	150969090	789624	7	56,93,51,58,119,118,401,	0,245,517,673,936,1248,1771,
#Deleted in new
chr1	150967381	150968478	chr1:150967381-150968478	0	-	150967381	150967381	8553170	4	333,58,119,84,	0,438,701,1013,
#Partially deleted in new
chr1	150967426	150974477	chr1:150967426-150974477	0	-	150967426	150969090	789624	7	58,51,58,119,118,174,160,	0,237,393,656,968,1491,6891,
#Partially deleted in new
chr1	150968106	150974435	chr1:150968106-150974435	0	-	150968106	150969090	789624	4	95,118,214,118,	0,288,811,6211,
#Partially deleted in new
chr1	150973122	150975534	chr1:150973122-150975534	3	+	150973122	150973122	8553170	3	47,99,222,	0,782,2190,
#Partially deleted in new
chr1	150982016	150995634	chr1:150982016-150995634	3	+	150983105	150995322	789624	14	363,97,91,97,95,114,91,80,60,85,96,59,123,375,	0,470,1073,1321,1958,2264,2569,4319,4585,5855,6074,6266,12560,13243,
#Partially deleted in new
chr1	150982248	150984371	chr1:150982248-150984371	0	+	150982248	150982248	8553170	5	131,97,97,95,91,	0,238,1089,1726,2032,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	150996085	151006404	chr1:150996085-151006404	1	-	150997286	151002617	0	11	202,662,156,192,143,103,159,65,58,804,93,	0,620,1538,1996,3283,3776,4371,5164,5639,6079,10226,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	150996548	151006857	chr1:150996548-151006857	1	-	150997286	151002191	0	10	819,156,192,143,103,159,65,58,159,546,	0,1075,1533,2820,3313,3908,4701,5176,5616,9763,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	150996834	151008365	chr1:150996834-151008365	3	-	150997286	151002617	0	11	533,156,192,143,103,159,65,58,804,486,118,	0,789,1247,2534,3027,3622,4415,4890,5330,9477,11413,
#Partially deleted in new
chr1	150997099	151008375	chr1:150997099-151008375	1	-	150997286	151006155	0	11	268,156,192,143,103,159,65,58,542,147,128,	0,524,982,2269,2762,3357,4150,4625,5065,9001,11148,
#Partially deleted in new
chr1	150997107	151006485	chr1:150997107-151006485	1	-	150997286	151002332	0	10	260,156,192,143,103,159,65,58,236,174,	0,516,974,2261,2754,3349,4142,4617,5057,9204,
#Deleted in new
chr1	150997360	150998170	chr1:150997360-150998170	0	-	150997440	150998170	789624	2	419,89,	0,721,
#Partially deleted in new
chr1	150999410	151006871	chr1:150999410-151006871	0	-	150999410	150999410	8553170	6	101,103,65,58,6,560,	0,451,1839,2314,2754,6901,
#Partially deleted in new
chr1	151008419	151028953	chr1:151008419-151028953	0	+	151008419	151008419	8553170	7	252,93,113,185,159,95,168,	0,9392,10137,16191,17095,18813,20366,
#Partially deleted in new
chr1	151008449	151033855	chr1:151008449-151033855	0	+	151008449	151008449	8553170	6	222,93,113,95,159,50,	0,9362,10107,18783,20336,25356,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	151008460	151035681	chr1:151008460-151035681	1	+	151008632	151034234	8553170	9	211,93,113,185,159,95,159,93,1876,	0,9351,10096,16150,17054,18772,20325,22911,25345,
#Partially deleted in new
chr1	151008466	151033966	chr1:151008466-151033966	0	+	151008466	151008466	8553170	6	205,93,203,95,159,161,	0,9345,10000,18766,20319,25339,
#Partially deleted in new
chr1	151008476	151035713	chr1:151008476-151035713	3	+	151008632	151034234	789624	8	195,93,203,185,159,95,159,1908,	0,9335,9990,16134,17038,18756,20309,25329,
#Partially deleted in new
chr1	151008476	151033837	chr1:151008476-151033837	0	+	151025540	151033837	789624	6	195,185,159,95,159,32,	0,16134,17038,18756,20309,25329,
#Partially deleted in new
chr1	151008477	151035207	chr1:151008477-151035207	1	+	151025540	151034234	789624	4	194,159,95,1402,	0,17037,18755,25328,
#Partially deleted in new
chr1	151008481	151034113	chr1:151008481-151034113	0	+	151025540	151034113	789624	5	190,93,159,95,308,	0,9330,17033,18751,25324,
#Partially deleted in new
chr1	151008482	151035713	chr1:151008482-151035713	1	+	151025540	151034234	789624	7	189,93,185,159,95,159,1908,	0,9329,16128,17032,18750,20303,25323,
#Partially deleted in new
chr1	151008529	151035713	chr1:151008529-151035713	1	+	151027249	151034234	789624	4	142,93,95,1908,	0,9282,18703,25276,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	151022745	151022852	chr1:151022745-151022852	3	-	151022745	151022745	8553170	1	107,	0,
#Partially deleted in new
chr1	151024741	151035711	chr1:151024741-151035711	1	+	151025540	151034234	789624	4	54,159,95,1906,	0,773,2491,9064,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	151036320	151047720	chr1:151036320-151047720	1	+	151038839	151046687	8553170	9	1342,65,231,183,103,132,87,99,1070,	0,2183,2475,6635,7011,7275,9476,9746,10330,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	151036569	151047600	chr1:151036569-151047600	3	+	151036725	151046687	789624	10	197,96,65,231,183,103,132,87,99,950,	0,997,1934,2226,6386,6762,7026,9227,9497,10081,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	151036614	151047586	chr1:151036614-151047586	1	+	151038839	151046687	789624	10	152,348,65,231,183,103,132,87,99,936,	0,700,1889,2181,6341,6717,6981,9182,9452,10036,
#Partially deleted in new
chr1	151037568	151046845	chr1:151037568-151046845	0	+	151037568	151046687	789624	9	94,65,225,183,103,132,87,99,195,	0,935,1233,5387,5763,6027,8228,8498,9082,
#Partially deleted in new
chr1	151038398	151043068	chr1:151038398-151043068	0	+	151038839	151043068	789624	3	166,231,113,	0,397,4557,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	151038839	151046687	chr1:151038839-151046687	0	+	151038839	151044889	789624	8	187,183,103,132,154,87,99,37,	0,4116,4492,4756,6040,6957,7227,7811,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	151045558	151046160	chr1:151045558-151046160	0	+	151045558	151045558	8553170	2	325,94,	0,508,
#Partially deleted in new
chr1	151047739	151051420	chr1:151047739-151051420	3	+	151047847	151050458	789624	2	1113,983,	0,2698,
#Partially deleted in new
chr1	151048568	151051986	chr1:151048568-151051986	0	+	151048568	151048568	8553170	3	284,47,102,	0,1869,3316,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	151048662	151049713	chr1:151048662-151049713	0	+	151048662	151048662	8553170	2	190,133,	0,918,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	151050970	151070325	chr1:151050970-151070325	3	-	151054246	151055730	789624	8	2357,91,111,317,295,203,62,62,	0,3260,4045,4706,8508,16161,17348,19293,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	151050972	151059649	chr1:151050972-151059649	1	-	151054246	151055730	789624	5	2355,91,111,317,171,	0,3258,4043,4704,8506,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	151050972	151059649	chr1:151050972-151059649	1	-	151054246	151055730	789624	6	2355,91,111,317,136,171,	0,3258,4043,4704,5678,8506,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	151052113	151059574	chr1:151052113-151059574	0	-	151052113	151052113	8553170	4	1214,91,978,96,	0,2117,2902,7365,
#Partially deleted in new
chr1	151052945	151059615	chr1:151052945-151059615	0	-	151052945	151052945	8553170	6	382,91,111,317,136,137,	0,1285,2070,2731,3705,6533,
#Partially deleted in new
chr1	151054236	151059773	chr1:151054236-151059773	0	-	151054236	151054236	8553170	5	85,111,317,131,295,	0,779,1440,2419,5242,
#Partially deleted in new
chr1	151055582	151059773	chr1:151055582-151059773	0	-	151055582	151055582	8553170	3	411,131,295,	0,1073,3896,
#Partially deleted in new
chr1	151057757	151068497	chr1:151057757-151068497	3	+	151067224	151067497	789624	2	2796,1279,	0,9461,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	151070577	151097915	chr1:151070577-151097915	0	+	151070577	151070577	8553170	6	357,119,108,168,195,64,	0,2461,17612,19828,22614,27274,
#Duplicated in new
chr1	151070603	151125542	chr1:151070603-151125542	3	+	151088189	151118256	789624	9	331,108,168,195,151,114,186,125,7586,	0,17586,19802,22588,27248,32958,36433,46788,47353,
#Partially deleted in new
chr1	151070776	151107177	chr1:151070776-151107177	0	+	151070776	151070776	8553170	7	158,108,48,195,151,114,141,	0,17413,17693,22415,27075,32785,36260,
#Partially deleted in new
chr1	151070803	151098002	chr1:151070803-151098002	0	+	151070803	151070803	8553170	6	131,140,48,168,195,151,	0,17354,17666,19602,22388,27048,
#Partially deleted in new
chr1	151088157	151118671	chr1:151088157-151118671	1	+	151088189	151118256	789624	7	140,168,195,151,186,125,715,	0,2248,5034,9694,18879,29234,29799,
#Partially deleted in new
chr1	151093245	151118495	chr1:151093245-151118495	0	+	151093245	151093245	8553170	4	141,151,186,539,	0,4606,13791,24711,
#Partially deleted in new
chr1	151111911	151112728	chr1:151111911-151112728	7	-	151111911	151111911	16724991	3	20,67,84,	0,337,733,
#Deleted in new
chr1	151130074	151131610	chr1:151130074-151131610	3	-	151130074	151130074	8553170	1	1536,	0,
#Partially deleted in new
chr1	151131684	151146457	chr1:151131684-151146457	0	-	151132483	151142621	789624	19	1833,96,45,56,78,147,174,153,132,218,89,91,102,57,64,115,172,50,25,	0,2275,2716,2935,3113,3478,3906,4326,4763,5172,6026,6631,6945,7740,7953,8291,10819,12700,14748,
#Partially deleted in new
chr1	151131684	151146457	chr1:151131684-151146457	1	-	151132483	151142621	789624	20	1833,96,45,56,78,147,174,153,132,218,89,120,91,102,57,64,115,172,50,25,	0,2275,2716,2935,3113,3478,3906,4326,4763,5172,6026,6301,6631,6945,7740,7953,8291,10819,12700,14748,
#Partially deleted in new
chr1	151131684	151146628	chr1:151131684-151146628	2	-	151132483	151142621	789624	19	1833,45,56,78,147,174,153,132,218,89,120,91,102,57,64,115,172,50,196,	0,2716,2935,3113,3478,3906,4326,4763,5172,6026,6301,6631,6945,7740,7953,8291,10819,12700,14748,
#Partially deleted in new
chr1	151131706	151146611	chr1:151131706-151146611	0	-	151132483	151142621	789624	19	1811,45,56,78,147,174,153,132,218,89,120,91,102,57,64,115,172,50,1588,	0,2694,2913,3091,3456,3884,4304,4741,5150,6004,6279,6609,6923,7718,7931,8269,10797,12678,13317,
#Partially deleted in new
chr1	151131968	151144406	chr1:151131968-151144406	1	-	151132196	151142621	789624	13	725,11,132,218,89,120,91,102,57,64,115,172,22,	0,4184,4479,4888,5742,6017,6347,6661,7456,7669,8007,10535,12416,
#Deleted in new
chr1	151132066	151132868	chr1:151132066-151132868	0	-	151132066	151132066	8553170	2	415,72,	0,730,
#Partially deleted in new
chr1	151132196	151146664	chr1:151132196-151146664	1	-	151132196	151142621	789624	14	499,9,132,218,89,120,91,102,57,64,115,172,50,232,	0,3394,4251,4660,5514,5789,6119,6433,7228,7441,7779,10307,12188,14236,
#Deleted in new
chr1	151134198	151135266	chr1:151134198-151135266	0	-	151134198	151134198	8553170	4	247,56,78,104,	0,421,599,964,
#Deleted in new
chr1	151134330	151134875	chr1:151134330-151134875	0	-	151134330	151134330	8553170	2	345,78,	0,467,
#Partially deleted in new
chr1	151137711	151139461	chr1:151137711-151139461	0	-	151137711	151137711	8553170	4	88,97,102,37,	0,297,918,1713,
#Partially deleted in new
chr1	151156628	151159749	chr1:151156628-151159749	3	+	151158697	151159252	0	2	94,1084,	0,2037,
#Partially deleted in new
chr1	151156663	151169133	chr1:151156663-151169133	0	+	151166524	151169085	789624	7	59,71,89,98,89,195,148,	0,9807,10270,10457,10662,11480,12322,
#Partially deleted in new
chr1	151159747	151165919	chr1:151159747-151165919	3	-	151160881	151165258	0	3	1273,365,841,	0,1988,5331,
#Partially deleted in new
chr1	151160584	151165948	chr1:151160584-151165948	1	-	151160881	151165782	0	3	436,365,202,	0,1151,5162,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	151166021	151167979	chr1:151166021-151167979	0	+	151166021	151166021	8553170	5	182,71,89,98,654,	0,449,912,1099,1304,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	151166041	151170297	chr1:151166041-151170297	3	+	151166152	151169085	789624	7	162,71,89,98,89,195,1312,	0,429,892,1079,1284,2102,2944,
#Deleted in new
chr1	151166065	151166950	chr1:151166065-151166950	0	+	151166065	151166065	8553170	2	138,480,	0,405,
#Partially deleted in new
chr1	151166078	151169138	chr1:151166078-151169138	1	+	151166524	151169085	789624	7	174,71,89,98,89,195,153,	0,392,855,1042,1247,2065,2907,
#Partially deleted in new
chr1	151166668	151169111	chr1:151166668-151169111	0	+	151166668	151166668	8553170	5	354,98,89,195,126,	0,452,657,1475,2317,
#Partially deleted in new
chr1	151167867	151169133	chr1:151167867-151169133	0	+	151167867	151167867	8553170	2	471,148,	0,1118,
#Partially deleted in new
chr1	151169985	151172315	chr1:151169985-151172315	0	-	151170055	151172315	789624	4	118,144,131,48,	0,934,1647,2282,
#Partially deleted in new
chr1	151169986	151176016	chr1:151169986-151176016	3	-	151170080	151174875	789624	10	117,145,144,108,131,90,117,157,165,93,	0,532,933,1446,1646,2281,3512,4404,4766,5937,
#Partially deleted in new
chr1	151169986	151190188	chr1:151169986-151190188	0	-	151169986	151169986	8553170	13	117,145,144,108,131,90,117,2641,145,177,115,153,184,	0,532,933,1446,1646,2281,3512,4404,8014,14330,15519,15811,20018,
#Partially deleted in new
chr1	151169987	151175981	chr1:151169987-151175981	0	-	151174522	151174875	789624	10	116,145,140,108,131,90,117,141,165,30,	0,531,932,1445,1645,2280,3511,4403,4765,5964,
#Partially deleted in new
chr1	151171432	151175949	chr1:151171432-151175949	0	-	151171432	151171432	8553170	6	108,131,90,117,141,26,	0,200,835,2066,2958,4491,
#Partially deleted in new
chr1	151172328	151175976	chr1:151172328-151175976	0	-	151172328	151174875	789624	5	29,117,157,165,25,	0,1170,2062,2424,3623,
#Deleted in new
chr1	151175616	151176284	chr1:151175616-151176284	0	-	151175616	151175616	8553170	1	668,	0,
#Partially deleted in new
chr1	151176303	151190213	chr1:151176303-151190213	2	-	151176643	151190121	0	6	728,145,177,115,153,209,	0,1697,8013,9202,9494,13701,
#Partially deleted in new
chr1	151176461	151190158	chr1:151176461-151190158	0	-	151176643	151190121	0	6	603,145,177,115,153,154,	0,1539,7855,9044,9336,13543,
#Partially deleted in new
chr1	151176730	151190145	chr1:151176730-151190145	0	-	151176730	151176730	8553170	6	301,145,177,115,153,22,	0,1270,7586,8775,9067,13393,
#Partially deleted in new
chr1	151176872	151190213	chr1:151176872-151190213	1	-	151176872	151190121	789624	5	35,177,115,153,209,	0,7444,8633,8925,13132,
#Partially deleted in new
chr1	151185521	151190143	chr1:151185521-151190143	0	-	151185521	151185521	8553170	2	429,139,	0,4483,
#Partially deleted in new
chr1	151185539	151195321	chr1:151185539-151195321	0	-	151185539	151185539	8553170	3	81,153,43,	0,258,9739,
#Partially deleted in new
chr1	151197948	151231761	chr1:151197948-151231761	0	+	151198017	151231761	789624	4	169,32,81,91,	0,26299,29371,33722,
#Partially deleted in new
chr1	151198550	151249536	chr1:151198550-151249536	2	+	151198996	151247865	789624	15	531,32,81,131,118,153,300,206,84,49,85,147,130,46,1674,	0,25697,28769,33120,33697,34000,35646,38007,39631,40579,41404,43572,43887,48369,49312,
#Partially deleted in new
chr1	151198551	151249504	chr1:151198551-151249504	1	+	151198996	151247865	789624	15	530,35,81,131,118,153,300,206,84,49,85,147,130,46,1642,	0,25693,28768,33119,33696,33999,35645,38006,39630,40578,41403,43571,43886,48368,49311,
#Partially deleted in new
chr1	151198552	151249531	chr1:151198552-151249531	1	+	151198996	151247865	789624	14	529,32,81,131,118,153,300,206,84,49,85,130,46,1669,	0,25695,28767,33118,33695,33998,35644,38005,39629,40577,41402,43885,48367,49310,
#Partially deleted in new
chr1	151198552	151248149	chr1:151198552-151248149	1	+	151198996	151247865	789624	14	529,35,81,131,118,153,300,206,49,85,147,130,46,287,	0,25692,28767,33118,33695,33998,35644,38005,40577,41402,43570,43885,48367,49310,
#Partially deleted in new
chr1	151198553	151216000	chr1:151198553-151216000	0	+	151198996	151216000	789624	2	528,39,	0,17408,
#Partially deleted in new
chr1	151198574	151247888	chr1:151198574-151247888	1	+	151198996	151247865	789624	16	507,35,36,81,131,118,153,300,206,84,49,85,147,130,46,26,	0,25670,25796,28745,33096,33673,33976,35622,37983,39607,40555,41380,43548,43863,48345,49288,
#Partially deleted in new
chr1	151198724	151227361	chr1:151198724-151227361	0	+	151198996	151199116	789624	3	463,35,42,	0,25520,28595,
#Partially deleted in new
chr1	151213516	151231801	chr1:151213516-151231801	0	+	151224267	151231801	789624	6	31,39,35,36,81,131,	0,2445,10728,10854,13803,18154,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	151223879	151232345	chr1:151223879-151232345	0	+	151223879	151223879	8553170	4	400,81,131,98,	0,3440,7791,8368,
#Partially deleted in new
chr1	151224138	151232307	chr1:151224138-151232307	0	+	151224138	151224138	8553170	5	141,36,81,131,60,	0,232,3181,7532,8109,
#Partially deleted in new
chr1	151227266	151232641	chr1:151227266-151232641	0	+	151227266	151227266	8553170	4	134,131,118,91,	0,4404,4981,5284,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	151233621	151236747	chr1:151233621-151236747	0	+	151233621	151233621	8553170	3	163,300,190,	0,575,2936,
#Partially deleted in new
chr1	151236633	151238605	chr1:151236633-151238605	0	+	151236633	151236633	8553170	2	130,424,	0,1548,
#Partially deleted in new
chr1	151236633	151240291	chr1:151236633-151240291	0	+	151236633	151236633	8553170	4	130,84,49,337,	0,1548,2496,3321,
#Partially deleted in new
chr1	151242111	151248483	chr1:151242111-151248483	0	+	151242111	151242111	8553170	4	158,130,46,621,	0,326,4808,5751,
#Partially deleted in new
chr1	151254702	151267479	chr1:151254702-151267479	3	+	151254782	151267343	0	10	106,141,115,87,69,216,109,132,68,307,	0,7458,9211,10129,10463,10691,11301,11605,11817,12470,
#Partially deleted in new
chr1	151254708	151267459	chr1:151254708-151267459	1	+	151254782	151267343	789624	10	100,141,115,87,69,216,118,132,68,287,	0,7452,9205,10123,10457,10685,11295,11599,11811,12464,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	151254757	151262910	chr1:151254757-151262910	0	+	151254757	151254757	8553170	2	51,750,	0,7403,
#Partially deleted in new
chr1	151254762	151265588	chr1:151254762-151265588	0	+	151254762	151254762	8553170	5	46,141,115,403,195,	0,7398,9151,10069,10631,
#Partially deleted in new
chr1	151254768	151267232	chr1:151254768-151267232	0	+	151254768	151254768	8553170	9	40,141,115,87,69,216,436,68,60,	0,7392,9145,10063,10397,10625,11235,11751,12404,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	151259062	151265609	chr1:151259062-151265609	0	+	151262179	151265609	789624	6	159,141,115,87,69,216,	0,3098,4851,5769,6103,6331,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	151262559	151264939	chr1:151262559-151264939	0	+	151262559	151262559	8553170	3	45,255,108,	0,1214,2272,
#Deleted in new
chr1	151264887	151267466	chr1:151264887-151267466	0	+	151264887	151267343	789624	6	31,69,109,132,68,294,	0,278,1116,1420,1632,2285,
#Deleted in new
chr1	151265243	151266098	chr1:151265243-151266098	0	+	151265243	151265243	8553170	2	366,95,	0,760,
#Deleted in new
chr1	151266037	151267460	chr1:151266037-151267460	0	+	151266037	151266156	789624	4	161,132,68,288,	0,270,482,1135,
#Deleted in new
chr1	151266307	151266725	chr1:151266307-151266725	0	+	151266307	151266307	8553170	2	132,206,	0,212,
#Deleted in new
chr1	151266543	151267460	chr1:151266543-151267460	0	+	151266543	151267343	789624	3	44,39,288,	0,396,629,
#Partially deleted in new
chr1	151280023	151281929	chr1:151280023-151281929	3	-	151280023	151280023	789624	2	235,387,	0,1519,
#Partially deleted in new
chr1	151280023	151281880	chr1:151280023-151281880	0	-	151280023	151280023	8553170	2	235,72,	0,1785,
#Partially deleted in new
chr1	151281617	151286705	chr1:151281617-151286705	0	+	151282069	151286705	789624	2	462,431,	0,4657,
#Partially deleted in new
chr1	151282266	151292180	chr1:151282266-151292180	2	+	151286291	151291209	789624	9	129,2132,179,177,163,330,113,142,1466,	0,4008,6261,6828,7111,7411,7855,8165,8448,
#Partially deleted in new
chr1	151282287	151291895	chr1:151282287-151291895	0	+	151286291	151289741	789624	7	108,2132,179,330,113,142,1181,	0,3987,6240,7390,7834,8144,8427,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	151282311	151291903	chr1:151282311-151291903	1	+	151286291	151291209	789624	10	84,869,2132,179,177,163,330,113,142,1189,	0,2894,3963,6216,6783,7066,7366,7810,8120,8403,
#Deleted in new
chr1	151287483	151291903	chr1:151287483-151291903	0	+	151287483	151290746	789624	8	923,179,177,163,330,113,203,1189,	0,1044,1611,1894,2194,2638,2887,3231,
#Deleted in new
chr1	151288190	151289539	chr1:151288190-151289539	0	+	151288190	151288190	8553170	3	216,179,445,	0,337,904,
#Deleted in new
chr1	151290450	151291337	chr1:151290450-151291337	0	+	151290450	151290871	789624	2	123,643,	0,244,
#Partially deleted in new
chr1	151291796	151327715	chr1:151291796-151327715	3	-	151292851	151316481	0	11	1237,121,133,266,124,105,110,228,228,937,445,	0,2221,2612,7011,10047,10397,11744,14339,15777,23776,35474,
#Partially deleted in new
chr1	151291936	151327657	chr1:151291936-151327657	1	-	151292851	151326179	789624	13	1097,121,133,266,124,105,110,228,228,45,937,202,387,	0,2081,2472,6871,9907,10257,11604,14199,15637,18274,23636,34235,35334,
#Partially deleted in new
chr1	151292131	151327411	chr1:151292131-151327411	1	-	151292851	151316481	0	12	902,121,133,266,124,105,110,228,228,45,937,141,	0,1886,2277,6676,9712,10062,11409,14004,15442,18079,23441,35139,
#Partially deleted in new
chr1	151292132	151327657	chr1:151292132-151327657	1	-	151292851	151307759	0	10	901,121,133,266,124,105,110,228,228,387,	0,1885,2276,6675,9711,10061,11408,14003,15441,35138,
#Partially deleted in new
chr1	151292478	151327419	chr1:151292478-151327419	1	-	151292851	151316481	0	13	555,121,133,266,124,105,110,228,228,937,173,202,149,	0,1539,1930,6329,9365,9715,11062,13657,15095,23094,32266,33693,34792,
#Partially deleted in new
chr1	151292601	151298992	chr1:151292601-151298992	0	-	151292851	151298992	789624	5	432,63,121,133,185,	0,798,1416,1807,6206,
#Deleted in new
chr1	151292622	151294473	chr1:151292622-151294473	0	-	151292967	151294473	789624	3	411,90,65,	0,1426,1786,
#Partially deleted in new
chr1	151293618	151299034	chr1:151293618-151299034	0	-	151293946	151299034	789624	3	520,133,227,	0,790,5189,
#Partially deleted in new
chr1	151298424	151301866	chr1:151298424-151301866	0	-	151298424	151298424	8553170	2	649,23,	0,3419,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	151300664	151300964	chr1:151300664-151300964	3	-	151300664	151300664	8553170	1	300,	0,
#Partially deleted in new
chr1	151302247	151327416	chr1:151302247-151327416	0	-	151302247	151307759	789624	6	51,110,228,228,202,146,	0,1293,3888,5326,23924,25023,
#Partially deleted in new
chr1	151303353	151306433	chr1:151303353-151306433	0	-	151303353	151303353	8553170	2	297,298,	0,2782,
#Partially deleted in new
chr1	151306263	151327400	chr1:151306263-151327400	0	-	151306263	151307759	789624	4	100,228,100,130,	0,1310,9309,21007,
#Partially deleted in new
chr1	151315639	151327377	chr1:151315639-151327377	0	-	151315639	151316481	789624	3	870,173,107,	0,9105,11631,
#Deleted in new
chr1	151327948	151328429	chr1:151327948-151328429	3	+	151327948	151327948	8553170	1	481,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	151340639	151347251	chr1:151340639-151347251	3	-	151342185	151346320	0	11	2539,101,202,82,120,120,83,34,129,125,41,	0,2702,3041,3557,3777,4088,4466,5288,5565,5842,6571,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	151340647	151341966	chr1:151340647-151341966	3	+	151340647	151340647	8553170	2	255,103,	0,1216,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	151341828	151347326	chr1:151341828-151347326	1	-	151342185	151346320	0	11	1350,101,202,82,120,120,83,34,129,122,116,	0,1513,1852,2368,2588,2899,3277,4099,4376,4656,5382,
#Deleted in new
chr1	151341959	151344756	chr1:151341959-151344756	0	-	151342016	151344756	789624	7	126,105,101,202,82,120,29,	0,1114,1382,1721,2237,2457,2768,
#Partially deleted in new
chr1	151341959	151347357	chr1:151341959-151347357	1	-	151342185	151346320	0	11	1219,101,202,82,120,120,83,34,129,118,147,	0,1382,1721,2237,2457,2768,3146,3968,4245,4529,5251,
#Partially deleted in new
chr1	151342246	151346822	chr1:151342246-151346822	0	-	151342246	151346320	789624	11	932,101,202,82,120,120,83,34,129,185,68,	0,1095,1434,1950,2170,2481,2859,3681,3958,4175,4508,
#Deleted in new
chr1	151343696	151344667	chr1:151343696-151344667	0	-	151343696	151343696	8553170	3	186,82,251,	0,500,720,
#Partially deleted in new
chr1	151343748	151347021	chr1:151343748-151347021	0	-	151343748	151346320	789624	9	134,82,120,120,83,34,129,118,82,	0,448,668,979,1357,2179,2456,2740,3191,
#Partially deleted in new
chr1	151344198	151346973	chr1:151344198-151346973	0	-	151344198	151346320	789624	8	80,120,120,83,34,129,118,219,	0,218,529,907,1729,2006,2290,2556,
#Partially deleted in new
chr1	151344255	151346606	chr1:151344255-151346606	0	-	151344255	151346320	789624	7	23,120,120,83,34,129,28,	0,161,472,850,1672,1949,2323,
#Deleted in new
chr1	151344332	151345177	chr1:151344332-151345177	0	-	151344332	151344332	8553170	3	204,120,72,	0,395,773,
#Partially deleted in new
chr1	151344514	151347206	chr1:151344514-151347206	0	-	151345938	151346320	789624	7	22,120,83,30,129,118,56,	0,213,591,1413,1690,1974,2636,
#Partially deleted in new
chr1	151344520	151347228	chr1:151344520-151347228	0	-	151344520	151346320	789624	7	16,120,83,34,129,125,78,	0,207,585,1407,1684,1961,2630,
#Partially deleted in new
chr1	151344559	151346818	chr1:151344559-151346818	0	-	151345938	151346320	789624	7	45,120,83,34,119,118,64,	0,168,546,1368,1655,1929,2195,
#Partially deleted in new
chr1	151344576	151347241	chr1:151344576-151347241	0	-	151344576	151344576	8553170	8	28,120,83,34,129,118,12,31,	0,151,529,1351,1628,1912,2178,2634,
#Partially deleted in new
chr1	151344727	151347228	chr1:151344727-151347228	0	-	151344727	151346320	789624	6	120,83,34,129,118,78,	0,378,1200,1477,1761,2423,
#Partially deleted in new
chr1	151344763	151347292	chr1:151344763-151347292	0	-	151344763	151346320	789624	6	84,83,34,129,185,82,	0,342,1164,1441,1658,2447,
#Partially deleted in new
chr1	151344791	151346872	chr1:151344791-151346872	0	-	151344791	151346320	789624	6	56,83,34,129,125,118,	0,314,1136,1413,1690,1963,
#Partially deleted in new
chr1	151344961	151347294	chr1:151344961-151347294	0	-	151344961	151344961	8553170	5	227,30,129,118,84,	0,966,1243,1527,2249,
#Partially deleted in new
chr1	151344988	151346856	chr1:151344988-151346856	0	-	151344988	151344988	8553170	5	200,34,129,118,102,	0,939,1216,1500,1766,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	151345121	151347293	chr1:151345121-151347293	0	-	151345440	151346320	789624	6	67,158,34,129,125,83,	0,164,806,1083,1360,2089,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	151345141	151346835	chr1:151345141-151346835	0	-	151345440	151346320	789624	6	47,158,34,129,118,81,	0,144,786,1063,1347,1613,
#Deleted in new
chr1	151346966	151348027	chr1:151346966-151348027	3	+	151346966	151346966	8553170	2	222,396,	0,665,
#Partially deleted in new
chr1	151364301	151372733	chr1:151364301-151372733	3	-	151364542	151372641	789624	12	404,119,93,122,79,179,183,121,186,113,57,96,	0,624,887,1261,1466,1973,2420,3897,4702,5140,5411,8336,
#Partially deleted in new
chr1	151364303	151372694	chr1:151364303-151372694	0	-	151364303	151364303	8553170	11	402,119,93,122,79,179,183,121,551,57,57,	0,622,885,1259,1464,1971,2418,3895,4700,5409,8334,
#Partially deleted in new
chr1	151364304	151372703	chr1:151364304-151372703	1	-	151364542	151369899	789624	12	401,119,93,122,79,179,183,121,186,113,266,66,	0,621,884,1258,1463,1970,2417,3894,4699,5137,5408,8333,
#Partially deleted in new
chr1	151364304	151372700	chr1:151364304-151372700	1	-	151364542	151372641	789624	11	401,119,93,122,79,179,183,121,113,57,63,	0,621,884,1258,1463,1970,2417,3894,5137,5408,8333,
#Partially deleted in new
chr1	151364304	151372705	chr1:151364304-151372705	0	-	151364304	151364304	8553170	8	401,119,496,686,183,121,766,68,	0,621,884,1463,2417,3894,4699,8333,
#Partially deleted in new
chr1	151364307	151372707	chr1:151364307-151372707	0	-	151368311	151372641	789624	12	398,119,93,122,79,179,183,121,190,113,57,70,	0,618,881,1255,1460,1967,2414,3891,4692,5134,5405,8330,
#Partially deleted in new
chr1	151364308	151372706	chr1:151364308-151372706	0	-	151364308	151364308	8553170	10	397,119,93,122,79,179,183,121,766,69,	0,617,880,1254,1459,1966,2413,3890,4695,8329,
#Partially deleted in new
chr1	151364311	151372691	chr1:151364311-151372691	0	-	151368311	151372641	789624	11	394,119,93,122,79,179,121,190,113,57,54,	0,614,877,1251,1456,1963,3887,4688,5130,5401,8326,
#Partially deleted in new
chr1	151364334	151372707	chr1:151364334-151372707	0	-	151368311	151372641	789624	12	371,119,50,79,79,179,183,121,190,113,57,70,	0,591,854,1271,1433,1940,2387,3864,4665,5107,5378,8303,
#Partially deleted in new
chr1	151364338	151372692	chr1:151364338-151372692	0	-	151368311	151369899	789624	12	367,119,93,122,79,179,183,121,190,113,266,55,	0,587,850,1224,1429,1936,2383,3860,4661,5103,5374,8299,
#Partially deleted in new
chr1	151364344	151372694	chr1:151364344-151372694	0	-	151364344	151364344	8553170	11	361,119,93,122,79,179,183,121,551,57,57,	0,581,844,1218,1423,1930,2377,3854,4659,5368,8293,
#Partially deleted in new
chr1	151365572	151369841	chr1:151365572-151369841	0	-	151365572	151369841	789624	7	112,79,179,183,121,113,129,	0,195,702,1149,2626,3869,4140,
#Partially deleted in new
chr1	151365671	151372683	chr1:151365671-151372683	0	-	151365671	151372641	789624	9	13,79,179,183,121,186,65,57,46,	0,96,603,1050,2527,3332,3770,4041,6966,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	151366440	151372705	chr1:151366440-151372705	0	-	151369106	151372641	789624	7	13,183,160,121,186,57,68,	0,281,575,1758,2563,3272,6197,
#Partially deleted in new
chr1	151366680	151368316	chr1:151366680-151368316	0	-	151366680	151366680	8553170	2	224,118,	0,1518,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	151366887	151372705	chr1:151366887-151372705	0	-	151366887	151366887	8553170	7	17,160,121,186,113,57,68,	0,128,1311,2116,2554,2825,5750,
#Deleted in new
chr1	151369067	151370285	chr1:151369067-151370285	0	-	151369067	151369719	789624	4	122,113,57,85,	0,374,645,1133,
#Partially deleted in new
chr1	151399533	151401944	chr1:151399533-151401944	3	+	151399587	151401829	0	7	194,207,147,82,117,89,128,	0,447,908,1230,1705,2008,2283,
#Partially deleted in new
chr1	151399559	151401052	chr1:151399559-151401052	0	+	151399559	151399559	8553170	3	168,207,611,	0,421,882,
#Partially deleted in new
chr1	151399578	151401071	chr1:151399578-151401071	0	+	151399578	151399578	8553170	4	149,207,147,308,	0,402,863,1185,
#Partially deleted in new
chr1	151399586	151401906	chr1:151399586-151401906	0	+	151399586	151399586	8553170	2	141,1926,	0,394,
#Partially deleted in new
chr1	151399589	151401934	chr1:151399589-151401934	0	+	151399589	151399589	8553170	4	138,205,914,393,	0,391,852,1952,
#Partially deleted in new
chr1	151400173	151401936	chr1:151400173-151401936	0	+	151400173	151400173	8553170	5	14,147,82,392,120,	0,268,590,1065,1643,
#Partially deleted in new
chr1	151400900	151401937	chr1:151400900-151401937	0	+	151400900	151400900	8553170	3	455,89,121,	0,641,916,
#Partially deleted in new
chr1	151402723	151459465	chr1:151402723-151459465	3	-	151404801	151442204	0	19	3741,25,113,57,141,173,135,147,101,155,338,107,219,291,109,176,159,125,314,	0,3883,4187,4511,5376,5685,5970,8901,9572,20673,21225,22231,25099,25399,26879,27942,38204,39357,56428,
#Partially deleted in new
chr1	151402723	151459178	chr1:151402723-151459178	0	-	151402723	151402723	8553170	17	3741,417,57,141,173,135,147,101,155,338,107,219,291,109,176,125,27,	0,3883,4511,5376,5685,5970,8901,9572,20673,21225,22231,25099,25399,26879,27942,39357,56428,
#Partially deleted in new
chr1	151402723	151442204	chr1:151402723-151442204	1	-	151404801	151442204	0	17	3741,25,113,57,141,173,135,147,101,155,338,107,219,291,109,176,124,	0,3883,4187,4511,5376,5685,5970,8901,9572,20673,21225,22231,25099,25399,26879,27942,39357,
#Partially deleted in new
chr1	151402724	151459179	chr1:151402724-151459179	1	-	151404801	151442204	0	17	3740,25,113,57,141,173,135,147,101,155,338,107,219,291,159,125,28,	0,3882,4186,4510,5375,5684,5969,8900,9571,20672,21224,22230,25098,25398,38203,39356,56427,
#Partially deleted in new
chr1	151404223	151459179	chr1:151404223-151459179	1	-	151404801	151442204	0	19	2241,25,113,57,141,173,135,147,101,155,338,107,192,291,109,176,159,125,28,	0,2383,2687,3011,3876,4185,4470,7401,8072,19173,19725,20731,23599,23899,25379,26442,36704,37857,54928,
#Partially deleted in new
chr1	151404498	151459215	chr1:151404498-151459215	1	-	151404801	151442204	0	18	1966,25,113,57,141,173,135,147,101,155,338,107,192,291,109,176,125,64,	0,2108,2412,2736,3601,3910,4195,7126,7797,18898,19450,20456,23324,23624,25104,26167,37582,54653,
#Partially deleted in new
chr1	151404801	151459179	chr1:151404801-151459179	1	-	151404801	151442204	0	18	1663,25,113,57,141,173,135,174,101,155,338,107,219,291,109,176,125,28,	0,1805,2109,2433,3298,3607,3892,6823,7494,18595,19147,20153,23021,23321,24801,25864,37279,54350,
#Partially deleted in new
chr1	151406285	151423421	chr1:151406285-151423421	0	-	151406285	151423421	789624	9	179,25,113,57,141,173,135,101,25,	0,321,625,949,1814,2123,2408,6010,17111,
#Partially deleted in new
chr1	151406898	151408196	chr1:151406898-151408196	0	-	151406898	151406898	8553170	2	393,97,	0,1201,
#Partially deleted in new
chr1	151407237	151408553	chr1:151407237-151408553	0	-	151407237	151407237	8553170	2	54,454,	0,862,
#Deleted in new
chr1	151423498	151424463	chr1:151423498-151424463	0	-	151423498	151423498	8553170	2	53,515,	0,450,
#Partially deleted in new
chr1	151423521	151427980	chr1:151423521-151427980	0	-	151424263	151427980	789624	3	30,338,158,	0,427,4301,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	151424009	151425294	chr1:151424009-151425294	0	-	151424009	151424009	8553170	2	277,340,	0,945,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	151426188	151459179	chr1:151426188-151459179	0	-	151426188	151426188	8553170	7	1853,291,109,176,159,125,28,	0,1934,3414,4477,14739,15892,32963,
#Deleted in new
chr1	151427576	151428137	chr1:151427576-151428137	0	-	151427808	151428137	789624	1	561,	0,
#Partially deleted in new
chr1	151429399	151459187	chr1:151429399-151459187	0	-	151429399	151429399	8553170	4	312,176,125,36,	0,1266,12681,29752,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	151430705	151459179	chr1:151430705-151459179	0	-	151430705	151442204	789624	5	136,159,125,138,28,	0,10222,11375,20204,28446,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	151430713	151455197	chr1:151430713-151455197	0	-	151430713	151442204	789624	3	128,125,236,	0,11367,24248,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	151438999	151439095	chr1:151438999-151439095	3	+	151438999	151438999	8553170	1	96,	0,
#Partially deleted in new
chr1	151440842	151459179	chr1:151440842-151459179	0	-	151440842	151440842	8553170	3	244,125,28,	0,1238,18309,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	151442180	151442478	chr1:151442180-151442478	0	-	151442180	151442204	789624	2	25,174,	0,124,
#Partially deleted in new
chr1	151510509	151519029	chr1:151510509-151519029	0	+	151518519	151519029	789624	2	40,524,	0,7996,
#Partially deleted in new
chr1	151510935	151519029	chr1:151510935-151519029	0	+	151518519	151519029	789624	2	65,524,	0,7570,
#Partially deleted in new
chr1	151511396	151538692	chr1:151511396-151538692	3	+	151518519	151537346	789624	21	119,887,101,70,96,128,133,213,149,133,210,207,258,171,162,90,84,119,109,164,1488,	0,7109,8769,9017,9199,12037,12829,13277,14245,15578,17953,18512,19092,21005,22578,23645,24203,24383,24840,25333,25808,
#Partially deleted in new
chr1	151519369	151523561	chr1:151519369-151523561	0	+	151519369	151523561	789624	5	23,101,70,72,128,	0,796,1044,1250,4064,
#Partially deleted in new
chr1	151525593	151529392	chr1:151525593-151529392	0	+	151525593	151525593	8553170	3	197,133,43,	0,1381,3756,
#Deleted in new
chr1	151527830	151527938	chr1:151527830-151527938	3	-	151527830	151527830	8553170	1	108,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	151534139	151538692	chr1:151534139-151538692	0	+	151534139	151534139	8553170	6	992,84,119,109,164,1488,	0,1460,1640,2097,2590,3065,
#Deleted in new
chr1	151535877	151537502	chr1:151535877-151537502	0	+	151535877	151535877	8553170	3	468,164,298,	0,852,1327,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	151540304	151583583	chr1:151540304-151583583	3	+	151540366	151581707	789624	13	122,75,102,87,90,66,114,129,95,106,84,101,1940,	0,21786,22280,23599,24220,25858,29352,33965,34606,38416,39344,40637,41339,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	151540304	151583583	chr1:151540304-151583583	1	+	151540366	151581707	789624	11	122,102,87,66,114,129,95,106,84,101,1940,	0,22280,23599,25858,29352,33965,34606,38416,39344,40637,41339,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	151540307	151583583	chr1:151540307-151583583	1	+	151540366	151581707	789624	12	119,102,87,90,66,114,129,95,106,84,101,1940,	0,22277,23596,24217,25855,29349,33962,34603,38413,39341,40634,41336,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	151540322	151583576	chr1:151540322-151583576	1	+	151540366	151582113	789624	8	104,102,87,90,66,114,68,1476,	0,22262,23581,24202,25840,29334,33947,41778,
#Partially deleted in new
chr1	151540333	151569826	chr1:151540333-151569826	0	+	151540333	151540333	8553170	7	93,75,102,87,90,66,170,	0,21757,22251,23570,24191,25829,29323,
#Partially deleted in new
chr1	151540515	151561855	chr1:151540515-151561855	3	+	151540515	151540515	8553170	2	394,132,	0,21208,
#Deleted in new
chr1	151545795	151545891	chr1:151545795-151545891	3	+	151545795	151545795	5263520	1	96,	0,
#Partially deleted in new
chr1	151557445	151557940	chr1:151557445-151557940	7	+	151557445	151557445	16724991	1	495,	0,
#Partially deleted in new
chr1	151562521	151565021	chr1:151562521-151565021	0	+	151562521	151562521	8553170	3	165,87,497,	0,1382,2003,
#Partially deleted in new
chr1	151565921	151574927	chr1:151565921-151574927	0	+	151565921	151565921	8553170	4	307,114,129,17,	0,3735,8348,8989,
#Partially deleted in new
chr1	151612005	151693618	chr1:151612005-151693618	1	+	151612201	151693601	789624	11	376,193,65,105,79,164,90,150,129,60,26,	0,46229,48792,50160,53927,56466,71350,80429,80905,81418,81587,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	151612028	151699091	chr1:151612028-151699091	1	+	151612201	151693601	0	12	484,232,193,65,105,79,164,90,150,129,60,5499,	0,26859,46206,48769,50137,53904,56443,71327,80406,80882,81395,81564,
#Partially deleted in new
chr1	151612037	151613363	chr1:151612037-151613363	3	-	151612037	151612037	8553170	2	362,173,	0,1153,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	151612063	151694505	chr1:151612063-151694505	0	+	151612201	151638905	789624	12	318,232,193,65,105,79,164,90,150,129,60,913,	0,26824,46171,48734,50102,53869,56408,71292,80371,80847,81360,81529,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	151612081	151699074	chr1:151612081-151699074	3	+	151612201	151694417	0	12	431,232,193,65,105,79,164,90,150,129,60,4705,	0,26806,46153,48716,50084,53851,56390,71274,80353,80829,81342,82288,
#Partially deleted in new
chr1	151612188	151693471	chr1:151612188-151693471	0	+	151612201	151658313	789624	10	324,193,65,105,79,164,90,150,129,48,	0,46046,48609,49977,53744,56283,71167,80246,80722,81235,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	151612336	151694484	chr1:151612336-151694484	0	+	151612336	151638905	789624	11	45,232,193,65,105,79,164,90,150,129,1061,	0,26551,45898,48461,49829,53596,56135,71019,80098,80574,81087,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	151612393	151694490	chr1:151612393-151694490	0	+	151612393	151612393	8553170	10	119,232,193,65,105,79,164,90,150,1580,	0,26494,45841,48404,49772,53539,56078,70962,80041,80517,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	151612480	151667231	chr1:151612480-151667231	0	+	151612480	151612480	8553170	6	32,232,193,65,105,1299,	0,26407,45754,48317,49685,53452,
#Partially deleted in new
chr1	151612485	151660188	chr1:151612485-151660188	0	+	151612485	151612485	8553170	4	27,232,193,605,	0,26402,45749,47098,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	151613925	151694445	chr1:151613925-151694445	0	+	151613925	151613925	8553170	11	541,193,65,105,79,164,90,150,129,60,853,	0,44309,46872,48240,52007,54546,69430,78509,78985,79498,79667,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	151629323	151629430	chr1:151629323-151629430	3	+	151629323	151629323	8553170	1	107,	0,
#Partially deleted in new
chr1	151638855	151693601	chr1:151638855-151693601	0	+	151638855	151638855	8553170	11	264,193,65,105,79,164,90,150,129,60,9,	0,19379,21942,23310,27077,29616,44500,53579,54055,54568,54737,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	151638892	151685509	chr1:151638892-151685509	0	+	151638892	151638892	8553170	8	227,193,65,105,79,164,90,164,	0,19342,21905,23273,27040,29579,44463,46453,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	151638979	151694474	chr1:151638979-151694474	0	+	151638979	151693612	8553170	10	140,193,65,105,79,164,90,150,129,931,	0,19255,21818,23186,26953,29492,44376,53455,53931,54564,
#Partially deleted in new
chr1	151658234	151661536	chr1:151658234-151661536	0	+	151658234	151658234	8553170	2	193,739,	0,2563,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	151658242	151662744	chr1:151658242-151662744	0	+	151658242	151658242	8553170	3	185,65,579,	0,2555,3923,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	151658368	151669363	chr1:151658368-151669363	0	+	151658368	151669251	789624	6	59,65,105,79,164,223,	0,2429,3797,7564,10103,10772,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	151660383	151694484	chr1:151660383-151694484	0	+	151660383	151660383	8553170	9	479,105,79,164,90,150,129,60,892,	0,1782,5549,8088,22972,32051,32527,33040,33209,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	151675855	151694485	chr1:151675855-151694485	0	+	151675855	151675855	8553170	6	4598,90,150,129,60,116,	0,7500,16579,17055,17568,18514,
#Partially deleted in new
chr1	151701025	151708386	chr1:151701025-151708386	3	+	151701025	151701025	8553170	2	113,273,	0,7088,
#Partially deleted in new
chr1	151702403	151716052	chr1:151702403-151716052	1	-	151705040	151716020	0	12	1045,138,144,138,66,142,144,80,129,49,83,177,	0,2627,3418,3820,4265,5103,5388,6594,6816,7339,12190,13472,
#Partially deleted in new
chr1	151702404	151716814	chr1:151702404-151716814	3	-	151705040	151716020	0	13	1044,138,144,138,66,150,142,144,80,129,49,83,939,	0,2626,3417,3819,4264,4740,5102,5387,6593,6815,7338,12189,13471,
#Deleted in new
chr1	151702404	151710325	chr1:151702404-151710325	0	-	151702404	151702404	8553170	10	1044,138,144,138,66,504,144,80,129,583,	0,2626,3417,3819,4264,4740,5387,6593,6815,7338,
#Partially deleted in new
chr1	151702414	151716798	chr1:151702414-151716798	0	-	151705040	151716798	789624	14	1034,138,144,138,66,150,142,144,80,126,49,83,106,44,	0,2616,3407,3809,4254,4730,5092,5377,6583,6805,7328,12179,13461,14340,
#Deleted in new
chr1	151707506	151709537	chr1:151707506-151709537	0	-	151707506	151707506	8553170	4	142,144,80,318,	0,285,1491,1713,
#Partially deleted in new
chr1	151707508	151715984	chr1:151707508-151715984	0	-	151707508	151707508	8553170	7	140,144,80,126,49,83,109,	0,283,1489,1711,2234,7085,8367,
#Partially deleted in new
chr1	151708997	151716783	chr1:151708997-151716783	0	-	151708997	151708997	8553170	6	80,129,49,83,363,29,	0,222,745,5596,6621,7757,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	151710432	151729606	chr1:151710432-151729606	1	+	151714508	151728836	789624	9	942,160,96,110,93,77,47,128,119,	0,1405,3036,3987,9163,11653,17142,18333,19055,
#Partially deleted in new
chr1	151721536	151729600	chr1:151721536-151729600	3	+	151721536	151728836	789624	5	84,77,47,128,113,	0,549,6038,7229,7951,
#Partially deleted in new
chr1	151721835	151729606	chr1:151721835-151729606	0	+	151721835	151721835	8553170	5	101,77,47,128,119,	0,250,5739,6930,7652,
#Partially deleted in new
chr1	151722128	151729805	chr1:151722128-151729805	0	+	151722128	151722128	8553170	3	34,128,318,	0,6637,7359,
#Deleted in new
chr1	151728370	151729524	chr1:151728370-151729524	0	+	151728370	151728370	8553170	3	93,128,37,	0,395,1117,
#Deleted in new
chr1	151728428	151729606	chr1:151728428-151729606	0	+	151728428	151728428	8553170	3	47,128,119,	0,337,1059,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	151747596	151747700	chr1:151747596-151747700	3	-	151747596	151747596	8553170	1	104,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	151755540	151759911	chr1:151755540-151759911	3	+	151755540	151755540	8553170	2	286,343,	0,4028,
#Partially deleted in new
chr1	151757658	151758442	chr1:151757658-151758442	7	+	151757658	151757658	16724991	2	117,345,	0,439,
#Partially deleted in new
chr1	151759642	151763564	chr1:151759642-151763564	3	-	151760049	151763479	0	7	539,84,102,51,125,157,238,	0,1173,1808,2462,2733,3347,3684,
#Partially deleted in new
chr1	151759646	151763496	chr1:151759646-151763496	0	-	151762481	151763479	789624	7	535,84,102,51,125,197,170,	0,1169,1804,2458,2729,3303,3680,
#Partially deleted in new
chr1	151759653	151761519	chr1:151759653-151761519	0	-	151759653	151759653	8553170	3	378,84,69,	0,1162,1797,
#Partially deleted in new
chr1	151759874	151763484	chr1:151759874-151763484	1	-	151760049	151763479	789624	6	307,84,51,125,157,158,	0,941,2230,2501,3115,3452,
#Partially deleted in new
chr1	151759883	151760920	chr1:151759883-151760920	0	-	151759883	151759883	8553170	2	298,105,	0,932,
#Partially deleted in new
chr1	151760873	151763390	chr1:151760873-151763390	0	-	151761545	151763390	789624	7	26,102,64,43,125,157,64,	0,577,1088,1239,1502,2116,2453,
#Partially deleted in new
chr1	151761474	151763334	chr1:151761474-151763334	0	-	151762467	151763334	789624	6	78,49,51,125,192,8,	0,487,630,901,1480,1852,
#Partially deleted in new
chr1	151761506	151763067	chr1:151761506-151763067	0	-	151762016	151763067	789624	5	46,64,51,125,78,	0,455,598,869,1483,
#Deleted in new
chr1	151761961	151763334	chr1:151761961-151763334	0	-	151761961	151763334	789624	5	49,51,125,157,8,	0,143,414,1028,1365,
#Deleted in new
chr1	151762317	151763334	chr1:151762317-151763334	0	-	151762317	151762317	8553170	3	183,157,8,	0,672,1009,
#Deleted in new
chr1	151762616	151763489	chr1:151762616-151763489	0	-	151762616	151762616	8553170	2	530,163,	0,710,
#Partially deleted in new
chr1	151762898	151771330	chr1:151762898-151771330	1	+	151763135	151770243	789624	5	269,61,75,86,254,	0,4264,4326,7273,8178,
#Partially deleted in new
chr1	151762968	151771330	chr1:151762968-151771330	1	+	151763135	151771219	789624	6	199,61,75,176,86,254,	0,4194,4256,5089,7203,8108,
#Partially deleted in new
chr1	151762968	151771329	chr1:151762968-151771329	1	+	151763135	151771219	789624	6	199,43,93,176,86,253,	0,4194,4238,5089,7203,8108,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	151763383	151769501	chr1:151763383-151769501	3	-	151763383	151763383	8553170	3	118,106,158,	0,4754,5960,
#Partially deleted in new
chr1	151763479	151771321	chr1:151763479-151771321	1	+	151763494	151771219	789624	6	86,61,75,176,86,245,	0,3683,3745,4578,6692,7597,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	151763577	151771332	chr1:151763577-151771332	1	+	151766721	151770243	789624	5	3311,61,75,86,256,	0,3585,3647,6594,7499,
#Deleted in new
chr1	151766485	151767000	chr1:151766485-151767000	3	-	151766485	151766485	8553170	1	515,	0,
#Partially deleted in new
chr1	151766654	151771334	chr1:151766654-151771334	1	+	151766721	151771219	789624	6	234,61,75,176,86,258,	0,508,570,1403,3517,4422,
#Deleted in new
chr1	151766689	151768179	chr1:151766689-151768179	0	+	151766689	151766689	8553170	3	199,137,220,	0,473,1270,
#Deleted in new
chr1	151766689	151767511	chr1:151766689-151767511	0	+	151766689	151766689	8553170	2	199,349,	0,473,
#Partially deleted in new
chr1	151766721	151771219	chr1:151766721-151771219	3	+	151766721	151771219	789624	6	167,61,75,176,86,143,	0,441,503,1336,3450,4355,
#Partially deleted in new
chr1	151767193	151771334	chr1:151767193-151771334	0	+	151767193	151771113	789624	4	30,75,176,258,	0,31,864,3883,
#Partially deleted in new
chr1	151767247	151771330	chr1:151767247-151771330	0	+	151767247	151771219	789624	4	52,89,86,254,	0,897,2924,3829,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	151770106	151790488	chr1:151770106-151790488	0	-	151779140	151783022	789624	14	456,92,97,102,152,65,173,161,322,140,90,107,151,109,	0,4306,4603,4958,5285,5713,5989,6332,8578,8996,9944,11374,12792,20273,
#Partially deleted in new
chr1	151771563	151790522	chr1:151771563-151790522	3	-	151774451	151783022	0	14	423,92,97,102,152,65,173,161,322,140,190,107,151,143,	0,2849,3146,3501,3828,4256,4532,4875,7121,7539,8387,9917,11335,18816,
#Partially deleted in new
chr1	151771582	151790522	chr1:151771582-151790522	1	-	151771890	151783022	789624	15	404,39,50,97,102,152,65,173,161,322,140,190,107,151,143,	0,2830,2872,3127,3482,3809,4237,4513,4856,7102,7520,8368,9898,11316,18797,
#Partially deleted in new
chr1	151773478	151790479	chr1:151773478-151790479	1	-	151774451	151783022	0	13	1026,97,102,152,65,173,161,322,105,90,107,151,100,	0,1231,1586,1913,2341,2617,2960,5206,5624,6572,8002,9420,16901,
#Partially deleted in new
chr1	151773483	151790522	chr1:151773483-151790522	1	-	151774451	151783022	0	13	1021,97,102,152,65,173,161,322,140,190,107,151,143,	0,1226,1581,1908,2336,2612,2955,5201,5619,6467,7997,9415,16896,
#Partially deleted in new
chr1	151773491	151790488	chr1:151773491-151790488	1	-	151774451	151783022	789624	13	1013,97,102,152,65,173,161,322,140,178,107,151,90,	0,1218,1573,1900,2328,2604,2947,5193,5611,6459,7989,9407,16907,
#Partially deleted in new
chr1	151773493	151791416	chr1:151773493-151791416	1	-	151774451	151783022	0	14	734,92,97,102,152,65,173,161,322,140,190,107,151,607,	0,919,1216,1571,1898,2326,2602,2945,5191,5609,6457,7987,9405,17316,
#Partially deleted in new
chr1	151773497	151790505	chr1:151773497-151790505	1	-	151774451	151783022	0	13	1007,97,102,152,65,173,161,322,140,190,107,151,101,	0,1212,1567,1894,2322,2598,2941,5187,5605,6453,7983,9401,16907,
#Partially deleted in new
chr1	151774098	151790430	chr1:151774098-151790430	0	-	151779140	151783022	789624	14	129,92,97,102,152,65,173,161,322,140,90,107,151,26,	0,314,611,966,1293,1721,1997,2340,4586,5004,5952,7382,8800,16306,
#Partially deleted in new
chr1	151778632	151783049	chr1:151778632-151783049	0	-	151778632	151778632	8553170	5	374,140,90,107,151,	0,470,1418,2848,4266,
#Partially deleted in new
chr1	151779742	151790483	chr1:151779742-151790483	0	-	151779742	151779742	8553170	4	398,107,151,104,	0,1738,3156,10637,
#Partially deleted in new
chr1	151779978	151783771	chr1:151779978-151783771	0	-	151779978	151783022	789624	4	162,107,151,148,	0,1502,2920,3645,
#Partially deleted in new
chr1	151779989	151783188	chr1:151779989-151783188	0	-	151779989	151779989	8553170	3	151,107,290,	0,1491,2909,
#Partially deleted in new
chr1	151780086	151790433	chr1:151780086-151790433	0	-	151781966	151783022	789624	5	54,107,111,151,54,	0,1394,1822,2812,10293,
#Partially deleted in new
chr1	151782779	151790480	chr1:151782779-151790480	0	-	151782779	151782779	8553170	2	270,101,	0,7600,
#Deleted in new
chr1	151790803	151791545	chr1:151790803-151791545	0	+	151790803	151790803	8553170	2	442,111,	0,631,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	151790841	151794402	chr1:151790841-151794402	3	+	151790841	151790841	789624	2	404,588,	0,2973,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	151798053	151798602	chr1:151798053-151798602	3	+	151798053	151798053	8553170	1	549,	0,
#Deleted in new
chr1	151800263	151806154	chr1:151800263-151806154	3	-	151800922	151802704	789624	2	2454,925,	0,4966,
#Partially deleted in new
chr1	151806070	151826091	chr1:151806070-151826091	1	-	151807471	151825936	0	10	1563,110,111,108,133,122,513,142,86,162,	0,5254,6876,7168,7417,8503,8842,10593,11124,19859,
#Partially deleted in new
chr1	151806893	151831750	chr1:151806893-151831750	0	-	151831004	151831750	789624	12	740,110,111,108,133,122,513,142,86,30,205,26,	0,4431,6053,6345,6594,7680,8019,9770,10301,22535,24034,24831,
#Partially deleted in new
chr1	151806956	151831872	chr1:151806956-151831872	3	-	151807471	151831764	0	11	677,110,111,108,133,122,513,142,86,30,148,	0,4368,5990,6282,6531,7617,7956,9707,10238,22472,24768,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	151806957	151814789	chr1:151806957-151814789	0	-	151806957	151806957	8553170	2	676,3465,	0,4367,
#Deleted in new
chr1	151837818	151840557	chr1:151837818-151840557	3	-	151837927	151838989	789624	2	1402,355,	0,2384,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	151841735	151841837	chr1:151841735-151841837	3	-	151841735	151841735	8553170	1	102,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	151841876	151850385	chr1:151841876-151850385	3	+	151841876	151841876	8553170	3	155,198,153,	0,2168,8356,
#Partially deleted in new
chr1	151847262	151853697	chr1:151847262-151853697	3	-	151847370	151853565	0	6	152,125,111,139,202,255,	0,475,919,3790,4995,6180,
#Partially deleted in new
chr1	151847281	151851163	chr1:151847281-151851163	0	-	151847281	151851163	789624	3	133,111,111,	0,900,3771,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	151873583	151909808	chr1:151873583-151909808	3	-	151874887	151909458	0	6	1345,125,111,160,187,449,	0,3417,14689,15630,21424,35776,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	151874054	151909502	chr1:151874054-151909502	0	-	151890176	151909458	789624	7	874,125,111,160,232,187,143,	0,2946,14218,15159,15928,20953,35305,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	151874376	151891440	chr1:151874376-151891440	0	-	151874376	151874376	8553170	5	552,125,111,160,1458,	0,2624,13896,14837,15606,
#Partially deleted in new
chr1	151877086	151889750	chr1:151877086-151889750	0	-	151877086	151877086	8553170	3	39,111,537,	0,11186,12127,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	151885250	151899333	chr1:151885250-151899333	3	+	151885250	151885250	8553170	3	31,1599,1165,	0,11061,12918,
#Partially deleted in new
chr1	151894829	151909637	chr1:151894829-151909637	1	-	151894960	151909458	789624	2	365,278,	0,14530,
#Partially deleted in new
chr1	151949522	151950912	chr1:151949522-151950912	7	-	151949522	151949522	16724991	1	1390,	0,
#Partially deleted in new
chr1	151982914	151994390	chr1:151982914-151994390	3	-	151983162	151986230	0	3	410,153,639,	0,3184,10837,
#Partially deleted in new
chr1	151982917	151992578	chr1:151982917-151992578	1	-	151983162	151986230	0	3	407,153,56,	0,3181,9605,
#Partially deleted in new
chr1	151983231	151993824	chr1:151983231-151993824	0	-	151983231	151983231	8553170	4	93,107,153,73,	0,845,2867,10520,
#Partially deleted in new
chr1	151985157	151993829	chr1:151985157-151993829	0	-	151985157	151985157	8553170	3	178,153,78,	0,941,8594,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	151994530	152042774	chr1:151994530-152042774	3	+	151994530	151994530	8553170	13	76,114,110,109,58,70,1629,211,103,215,151,73,1190,	0,4177,16342,19492,21144,21475,22369,24096,25706,26639,27071,27906,47054,
#Partially deleted in new
chr1	152018661	152022508	chr1:152018661-152022508	7	+	152018661	152018661	16724991	4	178,100,217,73,	0,1575,2502,3774,
#Partially deleted in new
chr1	152032505	152037035	chr1:152032505-152037035	3	-	152032661	152036915	0	3	318,153,123,	0,1142,4407,
#Partially deleted in new
chr1	152032505	152047907	chr1:152032505-152047907	0	-	152032505	152032505	8553170	3	318,153,86,	0,1142,15316,
#Deleted in new
chr1	152077951	152078211	chr1:152077951-152078211	7	+	152077951	152077951	16724991	1	260,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	152079556	152080903	chr1:152079556-152080903	7	-	152079556	152079556	16724991	1	1347,	0,
#Deleted in new
chr1	152084143	152089064	chr1:152084143-152089064	3	-	152084966	152088143	789624	3	3400,158,45,	0,3862,4876,
#Deleted in new
chr1	152106316	152114080	chr1:152106316-152114080	1	-	152107384	152114080	789624	2	6762,138,	0,7626,
#Deleted in new
chr1	152106316	152115454	chr1:152106316-152115454	3	-	152107384	152114080	789624	3	6762,169,64,	0,7626,9074,
#Partially deleted in new
chr1	152122533	152125065	chr1:152122533-152125065	3	+	152122533	152122533	8553170	2	123,666,	0,1866,
#Deleted in new
chr1	152124437	152125080	chr1:152124437-152125080	5	-	152124437	152124437	16724991	1	643,	0,
#Deleted in new
chr1	152153594	152159228	chr1:152153594-152159228	3	-	152154743	152157889	789624	3	3366,158,45,	0,4157,5589,
#Partially deleted in new
chr1	152168124	152332686	chr1:152168124-152332686	0	+	152168124	152168124	8553170	4	296,80,52,104,	0,133629,146781,164458,
#Deleted in new
chr1	152205857	152207057	chr1:152205857-152207057	3	+	152205857	152205857	8553170	2	198,199,	0,1001,
#Deleted in new
chr1	152212081	152224193	chr1:152212081-152224193	3	-	152213075	152223253	789624	3	9409,163,51,	0,11034,12061,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	152249002	152271094	chr1:152249002-152271094	1	+	152249002	152249002	8553170	3	10,106,1678,	0,2650,20414,
#Partially deleted in new
chr1	152302174	152325203	chr1:152302174-152325203	3	-	152302699	152315456	0	3	12573,159,15,	0,13144,23014,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	152337067	152366692	chr1:152337067-152366692	1	+	152337067	152337067	789624	3	27,124,2706,	0,4019,26919,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	152348734	152360006	chr1:152348734-152360006	3	-	152350609	152358884	789624	3	8913,160,51,	0,10012,11221,
#Partially deleted in new
chr1	152365378	152404507	chr1:152365378-152404507	0	+	152365378	152365378	8553170	3	445,94,78,	0,8575,39051,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	152365751	152408084	chr1:152365751-152408084	1	+	152365751	152365751	8553170	3	72,94,331,	0,8202,42002,
#Partially deleted in new
chr1	152373953	152445456	chr1:152373953-152445456	0	+	152373953	152373953	8553170	2	94,613,	0,70890,
#Deleted in new
chr1	152399576	152399769	chr1:152399576-152399769	7	+	152399576	152399576	16724991	1	193,	0,
#Deleted in new
chr1	152409242	152414263	chr1:152409242-152414263	3	-	152409593	152412233	789624	3	1701,151,50,	0,2853,4971,
#Partially deleted in new
chr1	152510843	152512177	chr1:152510843-152512177	3	+	152511534	152511891	789624	2	155,664,	0,670,
#Deleted in new
chr1	152514501	152516010	chr1:152514501-152516010	3	+	152515383	152515683	789624	2	51,649,	0,860,
#Deleted in new
chr1	152565653	152566772	chr1:152565653-152566772	3	-	152565929	152566208	789624	2	576,35,	0,1084,
#Deleted in new
chr1	152579380	152580504	chr1:152579380-152580504	3	-	152579657	152579936	789624	2	577,36,	0,1088,
#Deleted in new
chr1	152600661	152601086	chr1:152600661-152601086	3	+	152600731	152601016	789624	1	425,	0,
#Deleted in new
chr1	152613810	152614098	chr1:152613810-152614098	3	+	152613810	152614098	789624	1	288,	0,
#Deleted in new
chr1	152622833	152623103	chr1:152622833-152623103	3	-	152622833	152623103	789624	1	270,	0,
#Deleted in new
chr1	152644392	152644717	chr1:152644392-152644717	7	-	152644392	152644392	16724991	1	325,	0,
#Deleted in new
chr1	152656331	152656501	chr1:152656331-152656501	7	+	152656331	152656331	16724991	1	170,	0,
#Deleted in new
chr1	152663395	152664659	chr1:152663395-152664659	3	+	152664105	152664438	789624	2	34,575,	0,689,
#Partially deleted in new
chr1	152675294	152676574	chr1:152675294-152676574	3	+	152676015	152676348	789624	2	34,580,	0,700,
#Deleted in new
chr1	152686122	152687401	chr1:152686122-152687401	3	+	152686843	152687176	789624	2	34,578,	0,701,
#Deleted in new
chr1	152698363	152699442	chr1:152698363-152699442	3	+	152698901	152699222	789624	2	31,561,	0,518,
#Deleted in new
chr1	152708159	152709491	chr1:152708159-152709491	3	+	152709075	152709375	789624	2	235,437,	0,895,
#Deleted in new
chr1	152709046	152709434	chr1:152709046-152709434	1	+	152709075	152709375	789624	1	388,	0,
#Deleted in new
chr1	152719521	152720470	chr1:152719521-152720470	3	+	152719521	152720274	789624	1	949,	0,
#Deleted in new
chr1	152737517	152737868	chr1:152737517-152737868	7	+	152737517	152737517	16724991	1	351,	0,
#Deleted in new
chr1	152744298	152744606	chr1:152744298-152744606	7	+	152744298	152744298	16724991	1	308,	0,
#Deleted in new
chr1	152759560	152762052	chr1:152759560-152762052	3	+	152759588	152761328	789624	1	2492,	0,
#Deleted in new
chr1	152776371	152776728	chr1:152776371-152776728	3	+	152776371	152776728	789624	1	357,	0,
#Deleted in new
chr1	152786213	152787702	chr1:152786213-152787702	1	+	152787299	152787656	789624	2	150,425,	0,1064,
#Deleted in new
chr1	152786276	152788426	chr1:152786276-152788426	3	+	152787299	152787656	789624	2	31,1149,	0,1001,
#Deleted in new
chr1	152787299	152787656	chr1:152787299-152787656	1	+	152787299	152787656	789624	2	44,223,	0,134,
#Deleted in new
chr1	152796750	152798181	chr1:152796750-152798181	3	+	152797794	152798139	789624	2	21,409,	0,1022,
#Deleted in new
chr1	152804834	152805478	chr1:152804834-152805478	3	-	152805121	152805478	789624	1	644,	0,
#Deleted in new
chr1	152805225	152806628	chr1:152805225-152806628	0	-	152805225	152805478	789624	3	119,64,28,	0,209,1375,
#Deleted in new
chr1	152811970	152813109	chr1:152811970-152813109	3	+	152812446	152812803	789624	1	1139,	0,
#Deleted in new
chr1	152827472	152827894	chr1:152827472-152827894	3	+	152827472	152827805	789624	1	422,	0,
#Deleted in new
chr1	152842867	152843983	chr1:152842867-152843983	3	+	152843520	152843763	789624	2	144,484,	0,632,
#Deleted in new
chr1	152859995	152860985	chr1:152859995-152860985	3	+	152860697	152860985	8553170	2	36,309,	0,681,
#Partially deleted in new
chr1	152878316	152885047	chr1:152878316-152885047	3	+	152884422	152884773	789624	2	130,645,	0,6086,
#Deleted in new
chr1	152908544	152911886	chr1:152908544-152911886	3	+	152909797	152911555	0	2	45,2108,	0,1234,
#Partially deleted in new
chr1	152930039	152949210	chr1:152930039-152949210	3	-	152930039	152930039	8553170	2	1772,225,	0,18946,
#Partially deleted in new
chr1	152947153	152949258	chr1:152947153-152949258	3	+	152948554	152948881	789624	2	95,722,	0,1383,
#Partially deleted in new
chr1	152970665	152972574	chr1:152970665-152972574	3	+	152971890	152972130	789624	2	29,704,	0,1205,
#Partially deleted in new
chr1	152985230	152985500	chr1:152985230-152985500	3	+	152985230	152985500	789624	1	270,	0,
#Partially deleted in new
chr1	153001746	153003855	chr1:153001746-153003855	3	+	153003020	153003530	789624	3	47,84,854,	0,856,1255,
#Partially deleted in new
chr1	153001748	153002400	chr1:153001748-153002400	0	+	153001748	153001748	8553170	2	45,455,	0,197,
#Partially deleted in new
chr1	153001750	153003496	chr1:153001750-153003496	0	+	153003020	153003496	789624	3	43,84,495,	0,852,1251,
#Partially deleted in new
chr1	153001770	153003856	chr1:153001770-153003856	1	+	153003020	153003530	789624	2	23,855,	0,1231,
#Partially deleted in new
chr1	153012481	153012614	chr1:153012481-153012614	3	-	153012481	153012481	8553170	1	133,	0,
#Partially deleted in new
chr1	153023961	153024260	chr1:153023961-153024260	7	+	153023961	153023961	16724991	1	299,	0,
#Partially deleted in new
chr1	153031201	153032900	chr1:153031201-153032900	3	+	153032345	153032615	789624	2	46,574,	0,1125,
#Partially deleted in new
chr1	153039724	153041118	chr1:153039724-153041118	1	-	153040127	153040346	789624	2	641,41,	0,1353,
#Partially deleted in new
chr1	153039743	153041931	chr1:153039743-153041931	3	-	153040127	153040346	789624	2	622,160,	0,2028,
#Partially deleted in new
chr1	153039827	153041931	chr1:153039827-153041931	1	-	153040127	153040346	789624	2	538,262,	0,1842,
#Partially deleted in new
chr1	153039847	153041928	chr1:153039847-153041928	1	-	153040127	153040346	789624	3	518,113,157,	0,819,1924,
#Partially deleted in new
chr1	153056112	153057537	chr1:153056112-153057537	3	-	153056516	153056735	789624	2	642,67,	0,1358,
#Partially deleted in new
chr1	153070223	153070840	chr1:153070223-153070840	3	-	153070620	153070839	789624	1	617,	0,
#Partially deleted in new
chr1	153093134	153094525	chr1:153093134-153094525	1	-	153093532	153093751	789624	2	636,42,	0,1349,
#Partially deleted in new
chr1	153093134	153106184	chr1:153093134-153106184	3	-	153093532	153093751	789624	2	636,56,	0,12994,
#Deleted in new
chr1	153112113	153113515	chr1:153112113-153113515	3	-	153112514	153112733	789624	2	639,42,	0,1360,
#Deleted in new
chr1	153140490	153140709	chr1:153140490-153140709	7	-	153140490	153140490	16724991	1	219,	0,
#Partially deleted in new
chr1	153149581	153150869	chr1:153149581-153150869	3	-	153149888	153150110	789624	2	550,18,	0,1270,
#Partially deleted in new
chr1	153174517	153191676	chr1:153174517-153191676	3	+	153174517	153174517	789624	3	128,528,1598,	0,1595,15561,
#Partially deleted in new
chr1	153203442	153205120	chr1:153203442-153205120	3	+	153204707	153205004	789624	2	89,434,	0,1244,
#Partially deleted in new
chr1	153217583	153219317	chr1:153217583-153219317	3	+	153218144	153218495	789624	2	36,1193,	0,541,
#Partially deleted in new
chr1	153225079	153226006	chr1:153225079-153226006	7	+	153225079	153225079	16724991	1	927,	0,
#Partially deleted in new
chr1	153259699	153262122	chr1:153259699-153262122	3	+	153260949	153261888	789624	2	34,1196,	0,1227,
#Partially deleted in new
chr1	153297861	153310718	chr1:153297861-153310718	3	-	153297955	153310665	0	7	273,119,199,153,119,202,108,	0,1251,4547,5995,7085,9204,12749,
#Partially deleted in new
chr1	153330119	153348546	chr1:153330119-153348546	3	-	153330766	153347932	0	9	826,119,199,153,119,214,90,95,19,	0,7061,10261,11507,12970,15049,15982,17764,18408,
#Partially deleted in new
chr1	153330119	153348840	chr1:153330119-153348840	1	-	153330766	153347932	0	9	826,119,199,153,119,202,90,95,313,	0,7061,10261,11507,12970,15049,15982,17764,18408,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	153331621	153331728	chr1:153331621-153331728	3	+	153331621	153331621	8553170	1	107,	0,
#Partially deleted in new
chr1	153345024	153347978	chr1:153345024-153347978	0	-	153345024	153345024	8553170	3	346,90,95,	0,1077,2859,
#Partially deleted in new
chr1	153357853	153361027	chr1:153357853-153361027	3	+	153358283	153360838	0	3	28,165,384,	0,415,2790,
#Partially deleted in new
chr1	153373705	153375649	chr1:153373705-153375649	3	-	153373826	153374592	0	3	262,158,98,	0,749,1846,
#Partially deleted in new
chr1	153379820	153380799	chr1:153379820-153380799	7	-	153379820	153379820	16724991	2	347,343,	0,636,
#Deleted in new
chr1	153390031	153390976	chr1:153390031-153390976	1	-	153390102	153390535	0	3	212,163,120,	0,363,825,
#Deleted in new
chr1	153390031	153391188	chr1:153390031-153391188	3	-	153390102	153390535	0	3	212,163,148,	0,363,1009,
#Deleted in new
chr1	153390203	153391071	chr1:153390203-153391071	0	-	153390203	153390203	8553170	2	40,677,	0,191,
#Deleted in new
chr1	153396590	153396771	chr1:153396590-153396771	7	-	153396590	153396590	16724991	1	181,	0,
#Deleted in new
chr1	153416523	153423225	chr1:153416523-153423225	3	+	153418082	153419309	0	3	40,158,4081,	0,1542,2621,
#Deleted in new
chr1	153417222	153419370	chr1:153417222-153419370	1	+	153418082	153419309	0	3	56,158,226,	0,843,1922,
#Deleted in new
chr1	153417943	153419355	chr1:153417943-153419355	1	+	153418082	153419309	0	2	280,211,	0,1201,
#Deleted in new
chr1	153427019	153428401	chr1:153427019-153428401	7	-	153427019	153427019	16724991	2	149,126,	0,1256,
#Deleted in new
chr1	153437057	153439949	chr1:153437057-153439949	3	-	153437057	153438329	789624	3	165,158,16,	0,1131,2876,
#Deleted in new
chr1	153457743	153459874	chr1:153457743-153459874	1	-	153457805	153459013	0	3	227,158,57,	0,1129,2074,
#Deleted in new
chr1	153457743	153460701	chr1:153457743-153460701	3	-	153457805	153459013	0	3	227,158,94,	0,1129,2864,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	153500462	153500764	chr1:153500462-153500764	3	-	153500462	153500462	8553170	1	302,	0,
#Deleted in new
chr1	153533602	153535115	chr1:153533602-153535115	3	+	153533602	153533602	8553170	2	319,212,	0,1301,
#Deleted in new
chr1	153534598	153536222	chr1:153534598-153536222	1	-	153534695	153535339	0	3	232,159,274,	0,603,1350,
#Deleted in new
chr1	153534598	153536244	chr1:153534598-153536244	3	-	153534695	153535339	0	4	232,159,145,137,	0,603,1190,1509,
#Deleted in new
chr1	153534598	153536215	chr1:153534598-153536215	1	-	153534695	153535339	0	3	232,174,267,	0,603,1350,
#Deleted in new
chr1	153534713	153535991	chr1:153534713-153535991	0	-	153534713	153535339	789624	3	117,159,203,	0,488,1075,
#Deleted in new
chr1	153535092	153535991	chr1:153535092-153535991	0	-	153535092	153535092	8553170	2	268,43,	0,856,
#Partially deleted in new
chr1	153537146	153541765	chr1:153537146-153541765	3	-	153537295	153540191	0	4	290,152,87,181,	0,2907,4238,4438,
#Partially deleted in new
chr1	153537156	153540694	chr1:153537156-153540694	1	-	153537295	153540191	0	3	280,152,74,	0,2897,3464,
#Partially deleted in new
chr1	153543612	153545802	chr1:153543612-153545802	1	-	153543758	153544794	0	4	311,156,49,50,	0,1041,1857,2140,
#Partially deleted in new
chr1	153543612	153545063	chr1:153543612-153545063	1	-	153543758	153544794	0	3	311,156,106,	0,1041,1345,
#Partially deleted in new
chr1	153543612	153545885	chr1:153543612-153545885	1	-	153543758	153544794	0	3	311,156,133,	0,1041,2140,
#Partially deleted in new
chr1	153543612	153545806	chr1:153543612-153545806	0	-	153543612	153543612	8553170	3	327,156,54,	0,1041,2140,
#Partially deleted in new
chr1	153543612	153545097	chr1:153543612-153545097	0	-	153543612	153543612	8553170	2	311,444,	0,1041,
#Partially deleted in new
chr1	153543620	153550136	chr1:153543620-153550136	3	-	153543758	153544794	0	3	303,156,72,	0,1033,6444,
#Partially deleted in new
chr1	153547328	153549372	chr1:153547328-153549372	3	-	153547681	153548485	0	3	518,146,192,	0,1016,1852,
#Partially deleted in new
chr1	153547512	153549126	chr1:153547512-153549126	1	-	153547681	153548485	0	3	334,146,99,	0,832,1515,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	153561107	153565865	chr1:153561107-153565865	1	-	153561438	153563874	789624	3	484,154,360,	0,2626,4398,
#Partially deleted in new
chr1	153561339	153567890	chr1:153561339-153567890	3	-	153561438	153563874	789624	3	252,154,47,	0,2394,6504,
#Partially deleted in new
chr1	153561339	153564233	chr1:153561339-153564233	1	-	153561438	153563874	789624	2	252,500,	0,2394,
#Partially deleted in new
chr1	153561339	153565830	chr1:153561339-153565830	1	-	153561438	153563775	789624	3	252,120,325,	0,2394,4166,
#Partially deleted in new
chr1	153561342	153566755	chr1:153561342-153566755	1	-	153561438	153563874	789624	3	249,154,54,	0,2391,5359,
#Partially deleted in new
chr1	153561348	153565542	chr1:153561348-153565542	1	-	153561566	153563874	789624	4	243,122,154,37,	0,2066,2385,4157,
#Duplicated in new
chr1	153586812	153606283	chr1:153586812-153606283	3	-	153586812	153586812	8553170	2	3064,112,	0,19359,
#Deleted in new
chr1	153606885	153609337	chr1:153606885-153609337	1	-	153607533	153608151	0	3	807,179,160,	0,1113,2292,
#Deleted in new
chr1	153606885	153613083	chr1:153606885-153613083	3	-	153607533	153608151	0	3	807,179,132,	0,1113,6066,
#Deleted in new
chr1	153606974	153608322	chr1:153606974-153608322	1	-	153607533	153608151	0	3	718,179,49,	0,1024,1299,
#Deleted in new
chr1	153607361	153609344	chr1:153607361-153609344	1	-	153607533	153608151	0	3	331,179,446,	0,637,1537,
#Deleted in new
chr1	153607451	153613145	chr1:153607451-153613145	0	-	153607451	153607451	8553170	3	267,179,194,	0,547,5500,
#Deleted in new
chr1	153614254	153616289	chr1:153614254-153616289	1	-	153614884	153615858	0	4	768,147,108,57,	0,980,1574,1978,
#Deleted in new
chr1	153614254	153616986	chr1:153614254-153616986	3	-	153614884	153615858	0	5	768,147,108,61,134,	0,980,1574,2040,2598,
#Deleted in new
chr1	153614254	153615938	chr1:153614254-153615938	1	-	153614884	153615858	0	3	768,147,110,	0,980,1574,
#Deleted in new
chr1	153614257	153616332	chr1:153614257-153616332	1	-	153614884	153615858	0	4	765,147,108,38,	0,977,1571,2037,
#Deleted in new
chr1	153614776	153616264	chr1:153614776-153616264	0	-	153614776	153614776	8553170	4	246,147,69,32,	0,458,1091,1456,
#Deleted in new
chr1	153614917	153616927	chr1:153614917-153616927	0	-	153614917	153614917	8553170	4	105,147,108,75,	0,317,911,1935,
#Partially deleted in new
chr1	153618786	153628248	chr1:153618786-153628248	0	-	153618786	153618786	8553170	4	252,214,116,128,	0,7533,8696,9334,
#Partially deleted in new
chr1	153618798	153628180	chr1:153618798-153628180	1	-	153618894	153626472	0	3	240,214,60,	0,7521,9322,
#Partially deleted in new
chr1	153618801	153628239	chr1:153618801-153628239	3	-	153618894	153626472	0	4	237,214,116,119,	0,7518,8681,9319,
#Partially deleted in new
chr1	153618803	153627048	chr1:153618803-153627048	1	-	153618894	153626472	0	3	235,214,98,	0,7516,8147,
#Partially deleted in new
chr1	153618803	153627268	chr1:153618803-153627268	1	-	153618894	153626472	0	3	235,214,130,	0,7516,8335,
#Partially deleted in new
chr1	153618807	153631360	chr1:153618807-153631360	0	-	153618807	153618807	8553170	5	231,1279,117,207,350,	0,7512,9313,11642,12203,
#Partially deleted in new
chr1	153626331	153634340	chr1:153626331-153634340	3	-	153626331	153626331	8553170	7	202,116,68,30,86,153,98,	0,1151,4679,5702,5823,7626,7911,
#Partially deleted in new
chr1	153627490	153634049	chr1:153627490-153634049	0	-	153627490	153627490	8553170	4	108,101,207,92,	0,3520,4543,6467,
#Partially deleted in new
chr1	153627507	153634111	chr1:153627507-153634111	0	-	153627507	153627507	8553170	5	91,117,68,207,154,	0,613,3503,4526,6450,
#Deleted in new
chr1	153627925	153632034	chr1:153627925-153632034	1	+	153628072	153631841	789624	4	223,70,154,337,	0,501,2583,3772,
#Deleted in new
chr1	153628383	153632039	chr1:153628383-153632039	0	+	153628383	153628383	8553170	2	2279,342,	0,3314,
#Deleted in new
chr1	153628396	153632037	chr1:153628396-153632037	3	+	153630521	153631841	0	3	100,154,340,	0,2112,3301,
#Deleted in new
chr1	153628421	153631804	chr1:153628421-153631804	1	+	153630521	153631532	789624	3	75,154,293,	0,2087,3090,
#Deleted in new
chr1	153628463	153630625	chr1:153628463-153630625	0	+	153630521	153630625	789624	3	33,86,117,	0,318,2045,
#Deleted in new
chr1	153631437	153632197	chr1:153631437-153632197	0	-	153631437	153631437	8553170	2	388,164,	0,596,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	153631660	153634397	chr1:153631660-153634397	3	-	153631660	153631660	8553170	5	165,207,122,153,184,	0,373,1375,2297,2553,
#Partially deleted in new
chr1	153633981	153646305	chr1:153633981-153646305	1	+	153636588	153645269	789624	6	362,82,154,187,138,1242,	0,2590,4313,8261,9245,11082,
#Partially deleted in new
chr1	153633981	153646305	chr1:153633981-153646305	1	+	153636588	153645075	789624	4	362,82,154,1242,	0,2590,4313,11082,
#Partially deleted in new
chr1	153634048	153646306	chr1:153634048-153646306	3	+	153636588	153645269	789624	6	295,82,154,184,138,1243,	0,2523,4246,8197,9178,11015,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	153634074	153645470	chr1:153634074-153645470	0	+	153634074	153634074	8553170	3	269,1877,407,	0,2497,10989,
#Partially deleted in new
chr1	153634079	153646302	chr1:153634079-153646302	1	+	153636588	153645269	789624	5	264,82,154,184,1239,	0,2492,4215,8166,10984,
#Partially deleted in new
chr1	153638083	153645470	chr1:153638083-153645470	1	+	153638304	153645269	789624	4	365,184,138,407,	0,4162,5143,6980,
#Partially deleted in new
chr1	153638341	153644385	chr1:153638341-153644385	1	+	153638349	153642449	789624	2	107,2143,	0,3901,
#Partially deleted in new
chr1	153658653	153661830	chr1:153658653-153661830	3	+	153658743	153661301	789624	4	233,47,119,631,	0,484,794,2546,
#Partially deleted in new
chr1	153658711	153661250	chr1:153658711-153661250	0	+	153658711	153658711	8553170	3	473,119,51,	0,736,2488,
#Partially deleted in new
chr1	153658713	153661829	chr1:153658713-153661829	0	+	153658713	153658713	789624	3	173,119,630,	0,734,2486,
#Partially deleted in new
chr1	153658726	153661564	chr1:153658726-153661564	0	+	153658726	153658726	8553170	2	840,365,	0,2473,
#Partially deleted in new
chr1	153661787	153671028	chr1:153661787-153671028	1	-	153662395	153668551	789624	14	769,91,115,62,88,79,117,66,103,78,124,43,60,111,	0,917,1231,1427,2255,2608,3432,3875,5767,6212,6665,8048,8383,9130,
#Partially deleted in new
chr1	153662035	153671048	chr1:153662035-153671048	3	-	153662395	153670922	789624	14	521,91,115,62,88,79,117,66,103,78,105,43,60,131,	0,669,983,1179,2007,2360,3184,3627,5519,5964,6417,7800,8135,8882,
#Partially deleted in new
chr1	153662064	153664474	chr1:153662064-153664474	0	-	153662064	153662064	8553170	5	492,91,258,88,79,	0,640,954,1978,2331,
#Partially deleted in new
chr1	153665662	153670232	chr1:153665662-153670232	0	-	153665662	153668551	789624	6	66,103,78,124,43,62,	0,1892,2337,2790,4173,4508,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	153667282	153670982	chr1:153667282-153670982	1	-	153667495	153670922	789624	6	375,78,105,43,60,65,	0,717,1170,2553,2888,3635,
#Partially deleted in new
chr1	153678636	153693992	chr1:153678636-153693992	3	+	153679108	153693414	789624	22	1193,200,114,136,92,136,85,121,75,78,105,72,157,156,169,147,124,69,175,99,92,641,	0,1864,2543,3067,3861,4739,5103,6327,7169,7486,8009,8379,8563,8997,9416,10316,10551,10816,11169,11647,14469,14715,
#Deleted in new
chr1	153680800	153681792	chr1:153680800-153681792	0	+	153680800	153680800	8553170	2	229,244,	0,748,
#Partially deleted in new
chr1	153688723	153693968	chr1:153688723-153693968	0	+	153688723	153688723	8553170	6	376,124,69,175,99,863,	0,464,729,1082,1560,4382,
#Deleted in new
chr1	153689704	153689793	chr1:153689704-153689793	3	-	153689704	153689704	5263520	1	89,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	153704087	153704385	chr1:153704087-153704385	3	+	153704087	153704087	8553170	1	298,	0,
#Partially deleted in new
chr1	153717302	153718347	chr1:153717302-153718347	7	-	153717302	153717302	16724991	2	520,232,	0,813,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	153726251	153726353	chr1:153726251-153726353	3	-	153726251	153726251	8553170	1	102,	0,
#Partially deleted in new
chr1	153728066	153774808	chr1:153728066-153774808	3	+	153728634	153773270	789624	30	718,84,84,114,85,67,145,130,98,192,88,80,92,107,120,130,55,104,45,120,154,69,76,114,49,168,101,73,157,1616,	0,12584,13218,18890,19212,20622,23028,24212,26575,29505,31459,32244,32760,33503,34661,35166,35765,36051,36623,36877,39607,40826,41702,42131,42618,43729,44273,44572,44858,45126,
#Partially deleted in new
chr1	153728090	153773535	chr1:153728090-153773535	1	+	153728634	153773270	789624	31	121,232,84,84,114,85,67,145,130,98,192,88,80,92,107,120,130,55,104,45,120,154,69,76,114,49,168,101,73,157,343,	0,462,12560,13194,18866,19188,20598,23004,24188,26551,29481,31435,32220,32736,33479,34637,35142,35741,36027,36599,36853,39583,40802,41678,42107,42594,43705,44249,44548,44834,45102,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr1	153728482	153774079	chr1:153728482-153774079	0	+	153728482	153728482	8553170	29	302,84,84,1799,145,130,118,98,192,88,80,92,107,120,130,55,104,45,120,154,69,76,114,49,168,101,73,157,887,	0,12168,12802,18474,22612,23796,25218,26159,29089,31043,31828,32344,33087,34245,34750,35349,35635,36207,36461,39191,40410,41286,41715,42202,43313,43857,44156,44442,44710,
#Deleted in new
chr1	153746850	153751227	chr1:153746850-153751227	3	-	153746850	153746850	8553170	2	154,81,	0,4296,
#Partially deleted in new
chr1	153750853	153773728	chr1:153750853-153773728	1	+	153751128	153773270	789624	23	386,130,98,192,88,80,92,107,120,130,55,104,45,120,154,69,76,114,49,168,372,157,536,	0,1425,3788,6718,8672,9457,9973,10716,11874,12379,12978,13264,13836,14090,16820,18039,18915,19344,19831,20942,21486,22071,22339,
#Deleted in new
chr1	153750982	153752176	chr1:153750982-153752176	3	-	153750982	153750982	8553170	2	209,107,	0,1087,
#Partially deleted in new
chr1	153751134	153774079	chr1:153751134-153774079	0	+	153751134	153761077	789624	25	105,130,98,192,88,80,92,90,107,120,130,55,104,45,120,154,69,76,114,49,168,101,73,157,887,	0,1144,3507,6437,8391,9176,9692,9885,10435,11593,12098,12697,12983,13555,13809,16539,17758,18634,19063,19550,20661,21205,21504,21790,22058,
#Partially deleted in new
chr1	153752076	153760902	chr1:153752076-153760902	0	+	153752076	153752076	8553170	6	332,98,192,88,80,76,	0,2565,5495,7449,8234,8750,
#Partially deleted in new
chr1	153757636	153773319	chr1:153757636-153773319	0	+	153757636	153761590	789624	18	127,107,120,130,55,104,45,120,154,69,76,114,49,168,101,73,157,127,	0,3933,5091,5596,6195,6481,7053,7307,10037,11256,12132,12561,13048,14159,14703,15002,15288,15556,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	153759673	153762840	chr1:153759673-153762840	0	+	153759673	153759673	8553170	2	2003,113,	0,3054,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	153766474	153774079	chr1:153766474-153774079	0	+	153766474	153766474	8553170	10	1353,69,76,114,49,168,101,73,157,887,	0,2418,3294,3723,4210,5321,5865,6164,6450,6718,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	153766830	153774079	chr1:153766830-153774079	0	+	153766830	153766830	8553170	9	997,69,76,114,49,168,372,157,887,	0,2062,2938,3367,3854,4965,5509,6094,6362,
#Deleted in new
chr1	153773033	153774808	chr1:153773033-153774808	0	+	153773033	153773270	789624	3	48,139,291,	0,159,1484,
#Deleted in new
chr1	153774353	153780157	chr1:153774353-153780157	1	+	153775113	153780002	789624	10	1811,210,159,125,195,91,199,98,131,332,	0,2164,2708,3407,3807,4109,4333,4760,4989,5472,
#Deleted in new
chr1	153775291	153780154	chr1:153775291-153780154	1	+	153775356	153780002	789624	10	873,210,159,125,195,91,199,98,131,329,	0,1226,1770,2469,2869,3171,3395,3822,4051,4534,
#Deleted in new
chr1	153775291	153780157	chr1:153775291-153780157	3	+	153775356	153780002	789624	10	873,210,159,125,195,91,199,98,131,332,	0,1226,1770,2469,2869,3171,3395,3822,4051,4534,
#Deleted in new
chr1	153775312	153780156	chr1:153775312-153780156	0	+	153775312	153775312	8553170	11	136,198,210,159,125,195,48,199,98,131,331,	0,654,1205,1749,2448,2848,3193,3374,3801,4030,4513,
#Deleted in new
chr1	153775318	153780156	chr1:153775318-153780156	0	+	153775318	153775318	8553170	2	1409,3095,	0,1743,
#Deleted in new
chr1	153775749	153780124	chr1:153775749-153780124	0	+	153775749	153775749	8553170	5	415,210,159,1313,299,	0,768,1312,2411,4076,
#Deleted in new
chr1	153776595	153780157	chr1:153776595-153780157	0	+	153776595	153780002	789624	9	132,159,125,195,91,199,98,131,227,	0,466,1165,1565,1867,2091,2518,2747,3335,
#Deleted in new
chr1	153776599	153778085	chr1:153776599-153778085	0	+	153776599	153776599	8553170	3	128,159,325,	0,462,1161,
#Deleted in new
chr1	153777986	153778796	chr1:153777986-153778796	0	+	153777986	153777986	8553170	2	369,334,	0,476,
#Deleted in new
chr1	153778196	153779387	chr1:153778196-153779387	0	+	153778196	153779387	789624	5	159,91,40,98,45,	0,266,649,917,1146,
#Deleted in new
chr1	153778511	153779883	chr1:153778511-153779883	0	+	153778511	153779883	789624	5	42,128,98,131,58,	0,246,602,831,1314,
#Deleted in new
chr1	153778639	153779634	chr1:153778639-153779634	0	+	153778639	153778639	8553170	3	246,98,292,	0,474,703,
#Deleted in new
chr1	153779050	153780151	chr1:153779050-153780151	0	+	153779050	153779050	8553170	3	161,131,326,	0,292,775,
#Deleted in new
chr1	153779200	153780124	chr1:153779200-153780124	0	+	153779200	153779200	8553170	2	273,299,	0,625,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	153785719	153785821	chr1:153785719-153785821	3	-	153785719	153785719	8553170	1	102,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	153789029	153812038	chr1:153789029-153812038	0	-	153789484	153812038	789624	4	753,139,118,17,	0,908,22701,22992,
#Partially deleted in new
chr1	153793946	153796302	chr1:153793946-153796302	5	+	153793946	153793946	16724991	3	259,303,98,	0,1474,2258,
#Partially deleted in new
chr1	153795172	153802091	chr1:153795172-153802091	7	+	153795172	153795172	16724991	11	550,139,130,125,166,166,235,184,187,79,79,	0,1035,1263,4320,4534,4840,5305,5986,6234,6546,6840,
#Partially deleted in new
chr1	153804724	153922975	chr1:153804724-153922975	3	-	153810176	153828347	789624	11	5586,118,111,203,316,171,132,132,130,336,243,	0,7006,7297,8525,11548,12647,13315,14066,14881,23288,118008,
#Partially deleted in new
chr1	153809809	153922030	chr1:153809809-153922030	1	-	153810176	153828347	789624	11	501,118,111,203,316,171,132,132,130,336,192,	0,1921,2212,3440,6463,7562,8230,8981,9796,18203,112029,
#Partially deleted in new
chr1	153810096	153922742	chr1:153810096-153922742	1	-	153810176	153828347	789624	11	214,118,111,203,316,123,132,132,130,336,10,	0,1634,1925,3153,6176,7323,7943,8694,9509,17916,112636,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	153811595	153812275	chr1:153811595-153812275	0	-	153811595	153811595	8553170	2	253,254,	0,426,
#Partially deleted in new
chr1	153811844	153817528	chr1:153811844-153817528	0	-	153811844	153817528	789624	5	4,111,203,313,157,	0,177,1405,4428,5527,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	153819623	153922828	chr1:153819623-153922828	0	-	153819623	153828347	789624	4	112,336,98,96,	0,8389,66800,103109,
#Partially deleted in new
chr1	153819676	153827610	chr1:153819676-153827610	0	-	153819676	153819676	8553170	2	59,53,	0,7881,
#Partially deleted in new
chr1	153828257	153898951	chr1:153828257-153898951	0	-	153828257	153828257	8553170	2	91,96,	0,70598,
#Partially deleted in new
chr1	153828265	153923360	chr1:153828265-153923360	0	-	153828265	153828347	789624	2	83,62,	0,95033,
#Deleted in new
chr1	153852105	153853414	chr1:153852105-153853414	7	-	153852105	153852105	16724991	1	1309,	0,
#Deleted in new
chr1	153890594	153890865	chr1:153890594-153890865	7	+	153890594	153890594	16724991	1	271,	0,
#Partially deleted in new
chr1	153898916	153922766	chr1:153898916-153922766	0	-	153898916	153898916	8553170	2	66,34,	0,23816,
#Partially deleted in new
chr1	153923336	153935240	chr1:153923336-153935240	0	+	153923336	153923336	8553170	3	626,136,492,	0,5298,11412,
#Partially deleted in new
chr1	153923336	153935240	chr1:153923336-153935240	3	+	153923336	153923336	8553170	3	626,136,505,	0,5298,11399,
#Partially deleted in new
chr1	153929500	153946696	chr1:153929500-153946696	3	-	153930296	153944374	789624	28	942,65,166,118,237,136,170,123,389,168,205,129,207,127,140,146,216,101,176,145,59,67,245,170,70,253,340,396,	0,1038,1191,1446,2703,3141,3360,3696,3982,4634,5259,6559,7041,7987,8223,9399,10088,10655,10930,11403,11730,11873,12368,12686,13055,13377,14557,16800,
#Partially deleted in new
chr1	153929500	153933265	chr1:153929500-153933265	0	-	153929500	153929500	8553170	3	942,526,1062,	0,1038,2703,
#Partially deleted in new
chr1	153930245	153932720	chr1:153930245-153932720	0	-	153930245	153930245	8553170	5	197,65,373,237,79,	0,293,446,1958,2396,
#Partially deleted in new
chr1	153930741	153932893	chr1:153930741-153932893	0	-	153930741	153930741	8553170	5	116,118,52,136,33,	0,205,1462,1900,2119,
#Deleted in new
chr1	153932175	153933041	chr1:153932175-153933041	0	-	153932175	153932175	8553170	2	602,181,	0,685,
#Deleted in new
chr1	153932538	153933165	chr1:153932538-153933165	0	-	153932538	153932538	8553170	2	239,305,	0,322,
#Partially deleted in new
chr1	153932860	153945269	chr1:153932860-153945269	0	-	153932860	153945144	789624	22	170,123,389,168,205,129,207,127,140,146,216,101,176,145,59,67,245,170,70,253,340,135,	0,336,622,1274,1899,3199,3681,4627,4863,6039,6728,7295,7570,8043,8370,8513,9008,9326,9695,10017,11197,12274,
#Deleted in new
chr1	153935832	153936642	chr1:153935832-153936642	0	-	153935832	153935832	8553170	2	356,101,	0,709,
#Deleted in new
chr1	153939587	153940652	chr1:153939587-153940652	0	-	153939587	153939587	8553170	2	669,222,	0,843,
#Deleted in new
chr1	153940894	153941434	chr1:153940894-153941434	0	-	153940894	153940894	8553170	2	395,61,	0,479,
#Deleted in new
chr1	153941233	153942244	chr1:153941233-153942244	0	-	153941233	153941233	8553170	3	56,67,376,	0,140,635,
#Partially deleted in new
chr1	153941928	153944090	chr1:153941928-153944090	0	-	153941928	153944090	789624	4	185,70,253,33,	0,627,949,2129,
#Deleted in new
chr1	153942278	153943081	chr1:153942278-153943081	0	-	153942278	153942278	8553170	2	347,204,	0,599,
#Partially deleted in new
chr1	153947668	153958615	chr1:153947668-153958615	0	-	153953357	153958497	789624	10	661,187,270,407,245,50,65,30,104,271,	0,789,1446,3591,4349,4728,4902,5136,5597,10676,
#Partially deleted in new
chr1	153947674	153958576	chr1:153947674-153958576	1	-	153948108	153958497	789624	5	655,187,270,345,178,	0,783,1440,3585,10724,
#Partially deleted in new
chr1	153947674	153958625	chr1:153947674-153958625	3	-	153948108	153958497	0	14	655,187,270,407,245,50,65,30,104,69,62,117,102,281,	0,783,1440,3585,4343,4722,4896,5130,5591,5863,6580,7198,7390,10670,
#Partially deleted in new
chr1	153947674	153954989	chr1:153947674-153954989	0	-	153948888	153954989	789624	13	655,187,67,270,407,245,50,80,30,104,69,62,117,	0,783,1159,1440,3585,4343,4722,4896,5130,5591,5863,6580,7198,
#Partially deleted in new
chr1	153947677	153958564	chr1:153947677-153958564	0	-	153947677	153947677	8553170	12	652,187,270,245,50,80,30,104,69,62,294,220,	0,780,1437,4340,4719,4893,5127,5588,5860,6577,7195,10667,
#Partially deleted in new
chr1	153949171	153952096	chr1:153949171-153952096	0	-	153949171	153949171	8553170	2	213,837,	0,2088,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	153952131	153952962	chr1:153952131-153952962	0	-	153952131	153952131	8553170	3	131,50,392,	0,265,439,
#Deleted in new
chr1	153952155	153952496	chr1:153952155-153952496	0	-	153952155	153952155	8553170	2	107,100,	0,241,
#Partially deleted in new
chr1	153953315	153958123	chr1:153953315-153958123	0	-	153953315	153953315	8553170	6	54,69,62,117,102,63,	0,222,939,1557,1749,4745,
#Partially deleted in new
chr1	153954265	153958204	chr1:153954265-153958204	0	-	153954265	153954265	8553170	4	51,117,102,59,	0,607,799,3880,
#Partially deleted in new
chr1	153959098	153963572	chr1:153959098-153963572	1	-	153960097	153962715	789624	4	1656,131,219,78,	0,3121,3430,4396,
#Partially deleted in new
chr1	153959098	153963641	chr1:153959098-153963641	1	-	153960590	153962715	789624	3	1656,219,147,	0,3430,4396,
#Partially deleted in new
chr1	153959098	153968184	chr1:153959098-153968184	3	-	153960097	153962715	789624	5	1656,131,219,107,101,	0,3121,3430,4498,8985,
#Partially deleted in new
chr1	153959098	153963492	chr1:153959098-153963492	1	-	153960097	153962715	789624	4	1656,131,219,316,	0,3121,3430,4078,
#Partially deleted in new
chr1	153959109	153963475	chr1:153959109-153963475	1	-	153960097	153962715	789624	3	1645,131,947,	0,3110,3419,
#Partially deleted in new
chr1	153959110	153963462	chr1:153959110-153963462	1	-	153960097	153962715	789624	4	1644,131,219,404,	0,3109,3418,3948,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	153959111	153967712	chr1:153959111-153967712	1	-	153960097	153962715	789624	5	1643,131,219,107,327,	0,3108,3417,4485,8274,
#Partially deleted in new
chr1	153959150	153975887	chr1:153959150-153975887	3	-	153963652	153975887	8553170	6	1604,131,219,107,130,62,	0,3069,3378,4446,15555,16675,
#Partially deleted in new
chr1	153960109	153963322	chr1:153960109-153963322	0	-	153960109	153962715	789624	4	645,131,219,146,	0,2110,2419,3067,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	153960352	153967621	chr1:153960352-153967621	0	-	153960352	153962715	789624	5	402,131,219,107,171,	0,1867,2176,3244,7098,
#Partially deleted in new
chr1	153960453	153963262	chr1:153960453-153963262	0	-	153960453	153962715	789624	4	301,131,219,261,	0,1766,2075,2548,
#Deleted in new
chr1	153962310	153963139	chr1:153962310-153963139	0	-	153962310	153962310	8553170	3	40,219,270,	0,218,559,
#Deleted in new
chr1	153962350	153962420	chr1:153962350-153962420	3	-	153962350	153962350	5263520	1	70,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	153964360	153965070	chr1:153964360-153965070	3	+	153964360	153964360	8553170	1	710,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	153966515	153966930	chr1:153966515-153966930	3	+	153966515	153966515	8553170	1	415,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	153967533	153968968	chr1:153967533-153968968	0	+	153967533	153967533	8553170	3	351,178,39,	0,988,1396,
#Partially deleted in new
chr1	153967891	153973080	chr1:153967891-153973080	0	+	153968525	153973080	789624	6	293,118,247,122,93,109,	0,630,1038,1442,4852,5080,
#Partially deleted in new
chr1	153967902	153974363	chr1:153967902-153974363	3	+	153968525	153974065	789624	10	262,178,247,122,93,107,69,85,97,492,	0,619,1027,1431,4841,5069,5292,5477,5717,5969,
#Partially deleted in new
chr1	153967920	153974359	chr1:153967920-153974359	1	+	153968525	153974065	789624	10	264,178,247,122,93,107,69,85,97,488,	0,601,1009,1413,4823,5051,5274,5459,5699,5951,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	153967924	153972768	chr1:153967924-153972768	0	+	153967924	153967924	8553170	6	240,118,247,122,118,25,	0,597,1005,1409,1711,4819,
#Partially deleted in new
chr1	153968236	153973072	chr1:153968236-153973072	1	+	153968525	153972854	789624	5	74,178,247,122,329,	0,285,693,1097,4507,
#Partially deleted in new
chr1	153968236	153974356	chr1:153968236-153974356	1	+	153968525	153974065	789624	10	74,178,247,122,93,107,69,85,97,485,	0,285,693,1097,4507,4735,4958,5143,5383,5635,
#Partially deleted in new
chr1	153968242	153974361	chr1:153968242-153974361	1	+	153968525	153974065	789624	10	68,118,247,122,93,107,69,85,97,490,	0,279,687,1091,4501,4729,4952,5137,5377,5629,
#Deleted in new
chr1	153968258	153969311	chr1:153968258-153969311	0	+	153968258	153968258	8553170	3	52,178,382,	0,263,671,
#Partially deleted in new
chr1	153968260	153973019	chr1:153968260-153973019	0	+	153968260	153968260	8553170	5	50,118,526,93,48,	0,261,669,4483,4711,
#Deleted in new
chr1	153968263	153969354	chr1:153968263-153969354	0	+	153968263	153968263	8553170	2	47,833,	0,258,
#Deleted in new
chr1	153968309	153969458	chr1:153968309-153969458	0	+	153968525	153969458	789624	4	52,178,247,125,	0,212,620,1024,
#Partially deleted in new
chr1	153969395	153974131	chr1:153969395-153974131	0	+	153969395	153969395	8553170	6	60,335,69,85,97,260,	0,3348,3799,3984,4224,4476,
#Partially deleted in new
chr1	153974268	153977688	chr1:153974268-153977688	3	-	153974678	153977252	0	5	567,80,83,38,519,	0,1557,2424,2707,2901,
#Partially deleted in new
chr1	153974511	153977638	chr1:153974511-153977638	1	-	153974678	153976809	0	5	324,80,321,220,95,	0,1314,2181,2658,3032,
#Partially deleted in new
chr1	153974511	153977660	chr1:153974511-153977660	1	-	153974678	153976809	0	4	324,80,321,491,	0,1314,2181,2658,
#Partially deleted in new
chr1	153974681	153977394	chr1:153974681-153977394	0	-	153974681	153976809	0	4	154,80,230,56,	0,1144,2011,2657,
#Partially deleted in new
chr1	153975816	153977655	chr1:153975816-153977655	0	-	153975816	153975816	8553170	5	89,83,38,220,112,	0,876,1159,1353,1727,
#Partially deleted in new
chr1	153975838	153977626	chr1:153975838-153977626	0	-	153975838	153975838	8553170	3	67,230,457,	0,854,1331,
#Partially deleted in new
chr1	153975849	153986246	chr1:153975849-153986246	3	-	153982098	153986236	8553170	12	56,83,38,847,138,54,66,90,78,61,61,134,	0,843,1126,1320,6189,6541,6685,6869,7369,7671,8871,10263,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	153977742	153979160	chr1:153977742-153979160	3	+	153977742	153977742	8553170	1	1418,	0,
#Partially deleted in new
chr1	153981616	153985366	chr1:153981616-153985366	1	-	153982098	153983523	789624	8	560,54,66,90,78,61,61,383,	0,774,918,1102,1602,1904,3104,3367,
#Partially deleted in new
chr1	153981650	153986352	chr1:153981650-153986352	3	-	153982098	153986236	789624	8	526,54,66,90,78,61,61,240,	0,740,884,1068,1568,1870,3070,4462,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	153981653	153986246	chr1:153981653-153986246	0	-	153981653	153981653	8553170	3	1928,61,134,	0,3067,4459,
#Partially deleted in new
chr1	153982060	153986358	chr1:153982060-153986358	0	-	153982060	153982060	8553170	8	116,54,66,90,78,61,61,342,	0,330,474,658,1158,1460,2660,3956,
#Partially deleted in new
chr1	153982744	153985362	chr1:153982744-153985362	0	-	153982744	153982744	8553170	5	64,78,61,61,379,	0,474,776,1976,2239,
#Deleted in new
chr1	153990754	153992155	chr1:153990754-153992155	3	+	153990796	153992093	0	4	48,109,111,91,	0,360,811,1310,
#Deleted in new
chr1	153990761	153991698	chr1:153990761-153991698	0	+	153990761	153990761	8553170	2	41,584,	0,353,
#Deleted in new
chr1	153990762	153992145	chr1:153990762-153992145	0	+	153990762	153990762	8553170	4	272,109,111,81,	0,352,803,1302,
#Deleted in new
chr1	153990762	153992150	chr1:153990762-153992150	0	+	153990796	153991575	789624	5	40,121,109,111,86,	0,151,352,803,1302,
#Deleted in new
chr1	153990920	153992146	chr1:153990920-153992146	0	+	153990920	153990920	8553170	3	303,111,82,	0,645,1144,
#Partially deleted in new
chr1	153992684	154155116	chr1:153992684-154155116	3	-	153992834	154155044	789624	40	251,75,105,205,251,150,127,137,218,176,175,92,159,132,81,180,63,133,128,129,102,105,89,193,174,222,146,199,156,138,141,107,69,159,133,151,94,132,137,275,	0,330,2391,8171,9050,17287,19559,26248,29441,30437,32857,34821,37211,53384,53604,61543,62085,64130,65404,65880,67855,68257,68901,77588,96736,102250,107313,111327,125040,125986,133638,134626,136592,143129,145421,147117,148746,150761,160051,162157,
#Partially deleted in new
chr1	153992689	154056866	chr1:153992689-154056866	1	-	153992834	154056853	789624	16	246,75,105,150,127,137,218,176,175,92,159,132,81,180,63,52,	0,325,2386,17282,19554,26243,29436,30432,32852,34816,37206,53379,53599,61538,62080,64125,
#Partially deleted in new
chr1	153992693	154155116	chr1:153992693-154155116	1	-	153992834	154155044	789624	38	242,75,105,150,127,137,218,176,175,92,159,132,81,180,63,133,128,129,102,105,89,193,174,222,146,199,156,138,141,107,69,159,133,151,94,132,137,275,	0,321,2382,17278,19550,26239,29432,30428,32848,34812,37202,53375,53595,61534,62076,64121,65395,65871,67846,68248,68892,77579,96727,102241,107304,111318,125031,125977,133629,134617,136583,143120,145412,147108,148737,150752,160042,162148,
#Partially deleted in new
chr1	153995631	153995960	chr1:153995631-153995960	7	+	153995631	153995631	16724991	1	329,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	154039915	154040022	chr1:154039915-154040022	3	-	154039915	154039915	8553170	1	107,	0,
#Partially deleted in new
chr1	154078865	154079963	chr1:154078865-154079963	7	+	154078865	154078865	16724991	2	64,543,	0,555,
#Partially deleted in new
chr1	154104520	154104592	chr1:154104520-154104592	3	-	154104520	154104520	5263520	1	72,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	154155303	154183249	chr1:154155303-154183249	1	-	154157638	154183119	789624	7	2418,70,76,71,118,134,262,	0,15096,16725,17604,17780,20811,27684,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	154155307	154183172	chr1:154155307-154183172	1	-	154157638	154183119	789624	8	2414,70,63,76,71,118,134,185,	0,15092,15341,16721,17600,17776,20807,27680,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	154156356	154172677	chr1:154156356-154172677	0	-	154156356	154156356	8553170	4	1365,70,63,649,	0,14043,14292,15672,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	154156358	154183147	chr1:154156358-154183147	0	-	154156358	154156358	8553170	5	1363,70,2330,118,160,	0,14041,14290,16725,26629,
#Partially deleted in new
chr1	154156363	154183205	chr1:154156363-154183205	1	-	154157638	154183119	789624	8	1358,70,63,76,71,118,134,218,	0,14036,14285,15049,16544,16720,19751,26624,
#Partially deleted in new
chr1	154156363	154183208	chr1:154156363-154183208	1	-	154157638	154183119	789624	8	1358,70,63,76,71,83,121,221,	0,14036,14285,15665,16544,16720,19764,26624,
#Partially deleted in new
chr1	154156365	154183181	chr1:154156365-154183181	1	-	154157638	154183119	789624	8	1356,70,63,76,71,118,75,178,	0,14034,14283,15663,16542,16718,19749,26638,
#Partially deleted in new
chr1	154156693	154183119	chr1:154156693-154183119	1	-	154157717	154183119	789624	9	1028,79,70,63,76,71,118,134,132,	0,12611,13706,13955,15335,16214,16390,19421,26294,
#Partially deleted in new
chr1	154157111	154183227	chr1:154157111-154183227	0	-	154173183	154183119	789624	7	610,70,63,76,71,118,240,	0,13288,13537,14917,15796,15972,25876,
#Partially deleted in new
chr1	154157317	154192058	chr1:154157317-154192058	1	-	154157638	154192018	789624	9	404,70,63,76,71,118,134,126,157,	0,13082,13331,14711,15590,15766,18797,33868,34584,
#Partially deleted in new
chr1	154157525	154183078	chr1:154157525-154183078	0	-	154157525	154157525	8553170	8	196,70,63,76,71,118,65,91,	0,12874,13123,14503,15382,15558,18589,25462,
#Partially deleted in new
chr1	154157531	154171006	chr1:154157531-154171006	0	-	154157531	154157531	8553170	4	190,70,63,216,	0,12868,13117,13259,
#Partially deleted in new
chr1	154157582	154178183	chr1:154157582-154178183	1	-	154157638	154173197	789624	8	139,70,63,76,71,118,134,70,	0,12817,13066,13830,15325,15501,18532,20531,
#Partially deleted in new
chr1	154158608	154183130	chr1:154158608-154183130	1	-	154158968	154183119	789624	8	440,70,63,76,71,118,134,143,	0,11791,12040,13420,14299,14475,17506,24379,
#Partially deleted in new
chr1	154158669	154183164	chr1:154158669-154183164	1	-	154158968	154183119	789624	8	379,70,63,76,71,118,134,177,	0,11730,11979,12743,14238,14414,17445,24318,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	154166244	154166549	chr1:154166244-154166549	3	-	154166244	154166244	8553170	1	305,	0,
#Partially deleted in new
chr1	154167464	154192211	chr1:154167464-154192211	3	-	154167936	154192018	789624	10	476,79,70,63,76,71,118,134,126,310,	0,1840,2935,3184,3948,5443,5619,8650,23721,24437,
#Deleted in new
chr1	154169651	154170700	chr1:154169651-154170700	0	-	154169651	154169651	8553170	2	818,52,	0,997,
#Partially deleted in new
chr1	154170407	154183208	chr1:154170407-154183208	0	-	154172069	154183119	789624	5	62,63,63,134,221,	0,241,1621,5707,12580,
#Partially deleted in new
chr1	154171881	154176242	chr1:154171881-154176242	0	-	154171881	154171881	8553170	4	223,71,118,128,	0,1026,1202,4233,
#Partially deleted in new
chr1	154172066	154183816	chr1:154172066-154183816	0	-	154172066	154172066	8553170	5	38,71,118,134,208,	0,841,1017,4048,11542,
#Partially deleted in new
chr1	154172671	154183174	chr1:154172671-154183174	0	-	154172671	154172671	8553170	4	307,118,134,187,	0,412,3443,10316,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	154187259	154191948	chr1:154187259-154191948	0	-	154187259	154187259	789624	4	183,126,105,47,	0,3926,4369,4642,
#Deleted in new
chr1	154191202	154194648	chr1:154191202-154194648	0	-	154191202	154192018	789624	3	109,166,312,	0,699,3134,
#Deleted in new
chr1	154193664	154193743	chr1:154193664-154193743	3	-	154193664	154193664	5263520	1	79,	0,
#Partially deleted in new
chr1	154199371	154206333	chr1:154199371-154206333	3	-	154199426	154206307	789624	4	157,130,41,59,	0,1087,6226,6903,
#Partially deleted in new
chr1	154206695	154220578	chr1:154206695-154220578	0	-	154214554	154220407	8553170	8	953,59,167,54,118,70,102,237,	0,5624,5762,7197,7761,12020,13140,13646,
#Partially deleted in new
chr1	154206705	154220606	chr1:154206705-154220606	3	-	154207452	154220407	789624	7	943,59,167,54,118,102,265,	0,5614,5752,7187,7751,13130,13636,
#Partially deleted in new
chr1	154206719	154220624	chr1:154206719-154220624	1	-	154207452	154220407	789624	6	929,59,167,54,118,283,	0,5600,5738,7173,7737,13622,
#Partially deleted in new
chr1	154206719	154220619	chr1:154206719-154220619	1	-	154207452	154220407	789624	5	929,59,167,118,278,	0,5600,5738,7737,13622,
#Partially deleted in new
chr1	154207097	154220636	chr1:154207097-154220636	1	-	154207642	154220407	789624	6	551,167,54,118,102,295,	0,5360,6795,7359,12738,13244,
#Partially deleted in new
chr1	154207175	154220585	chr1:154207175-154220585	1	-	154207452	154220407	789624	6	473,59,167,118,102,244,	0,5144,5282,7281,12660,13166,
#Partially deleted in new
chr1	154207229	154208517	chr1:154207229-154208517	0	-	154207229	154207229	8553170	2	419,37,	0,1251,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	154207539	154212730	chr1:154207539-154212730	0	-	154207539	154207539	8553170	3	109,59,273,	0,4780,4918,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	154211733	154220533	chr1:154211733-154220533	1	-	154212315	154220407	789624	6	645,167,54,118,102,192,	0,724,2159,2723,8102,8608,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	154212132	154220628	chr1:154212132-154220628	1	-	154212315	154220407	789624	5	246,167,54,118,287,	0,325,1760,2324,8209,
#Partially deleted in new
chr1	154220178	154263505	chr1:154220178-154263505	1	+	154225123	154263152	789624	25	66,130,78,111,169,96,46,113,53,86,172,199,278,173,190,55,175,73,196,89,54,82,218,106,403,	0,4905,7103,8436,14412,15017,16387,16845,21334,23038,26025,29060,30862,31302,33721,34657,34973,35504,36884,37167,38798,39769,40713,41413,42924,
#Partially deleted in new
chr1	154220848	154271509	chr1:154220848-154271509	1	+	154225123	154270919	789624	27	127,130,78,111,202,96,46,113,53,86,172,199,278,173,190,55,175,73,196,89,54,82,218,106,68,198,629,	0,4235,6433,7766,13742,14347,15717,16175,20664,22368,25355,28390,30192,30632,33051,33987,34303,34834,36214,36497,38128,39099,40043,40743,45652,47908,50032,
#Partially deleted in new
chr1	154220848	154270852	chr1:154220848-154270852	3	+	154225123	154270295	789624	27	127,130,78,111,169,96,46,113,53,86,172,199,278,173,190,55,175,73,196,89,54,82,218,106,68,198,653,	0,4235,6433,7766,13742,14347,15717,16175,20664,22368,25355,28390,30192,30632,33051,33987,34303,34834,36214,36497,38128,39099,40043,40743,45652,47908,49351,
#Partially deleted in new
chr1	154220848	154263505	chr1:154220848-154263505	1	+	154225123	154263152	789624	25	127,130,78,111,148,96,46,113,53,86,172,199,278,173,190,55,175,73,196,89,54,82,218,106,403,	0,4235,6433,7766,13742,14347,15717,16175,20664,22368,25355,28390,30192,30632,33051,33987,34303,34834,36214,36497,38128,39099,40043,40743,42254,
#Partially deleted in new
chr1	154220884	154235294	chr1:154220884-154235294	0	+	154225123	154235294	789624	6	91,130,78,111,169,99,	0,4199,6397,7730,13706,14311,
#Partially deleted in new
chr1	154220942	154243302	chr1:154220942-154243302	0	+	154225123	154243302	789624	10	98,130,78,111,169,96,46,113,53,86,	0,4141,6339,7672,13648,14253,15623,16081,20570,22274,
#Partially deleted in new
chr1	154220946	154246379	chr1:154220946-154246379	0	+	154225123	154246379	789624	11	29,130,78,111,202,96,46,113,53,86,176,	0,4137,6335,7668,13644,14249,15619,16077,20566,22270,25257,
#Partially deleted in new
chr1	154220966	154243278	chr1:154220966-154243278	0	+	154225123	154243278	789624	10	74,130,78,111,148,96,46,113,53,62,	0,4117,6315,7648,13624,14229,15599,16057,20546,22250,
#Partially deleted in new
chr1	154221327	154237136	chr1:154221327-154237136	0	+	154225123	154237136	789624	8	69,130,78,111,169,96,46,113,	0,3756,5954,7287,13263,13868,15238,15696,
#Partially deleted in new
chr1	154225081	154270853	chr1:154225081-154270853	1	+	154225123	154270295	789624	26	132,78,111,169,96,46,113,53,86,172,199,278,173,190,55,175,73,196,89,54,82,218,106,68,198,654,	0,2200,3533,9509,10114,11484,11942,16431,18135,21122,24157,25959,26399,28818,29754,30070,30601,31981,32264,33895,34866,35810,36510,41419,43675,45118,
#Partially deleted in new
chr1	154242929	154251100	chr1:154242929-154251100	0	+	154242929	154242929	8553170	4	373,172,199,60,	0,3274,6309,8111,
#Partially deleted in new
chr1	154254646	154259983	chr1:154254646-154259983	0	+	154254646	154254646	8553170	7	244,175,73,196,89,54,36,	0,505,1036,2416,2699,4330,5301,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	154255246	154257846	chr1:154255246-154257846	0	+	154255246	154255246	8553170	4	80,73,196,501,	0,436,1816,2099,
#Partially deleted in new
chr1	154255251	154271510	chr1:154255251-154271510	0	+	154255251	154270919	789624	11	75,73,196,89,54,82,218,106,68,198,630,	0,431,1811,2094,3725,4696,5640,6340,11249,13505,15629,
#Partially deleted in new
chr1	154257070	154270564	chr1:154257070-154270564	0	+	154257070	154270295	789624	10	188,89,54,82,218,106,68,198,51,365,	0,275,1906,2877,3821,4521,9430,11686,12291,13129,
#Partially deleted in new
chr1	154257344	154261699	chr1:154257344-154261699	0	+	154257344	154257344	8553170	5	121,155,82,218,108,	0,1531,2603,3547,4247,
#Partially deleted in new
chr1	154258630	154261020	chr1:154258630-154261020	0	+	154258630	154258630	8553170	3	400,82,129,	0,1317,2261,
#Deleted in new
chr1	154259726	154259862	chr1:154259726-154259862	3	+	154259726	154259726	5263520	1	136,	0,
#Partially deleted in new
chr1	154259735	154263322	chr1:154259735-154263322	0	+	154259735	154259735	8553170	4	294,218,106,220,	0,1156,1856,3367,
#Partially deleted in new
chr1	154261627	154271173	chr1:154261627-154271173	0	+	154261627	154261627	8553170	5	70,68,195,51,293,	0,4873,7132,7734,9253,
#Partially deleted in new
chr1	154266451	154269695	chr1:154266451-154269695	0	+	154266451	154266451	8553170	2	117,939,	0,2305,
#Partially deleted in new
chr1	154272510	154275875	chr1:154272510-154275875	3	+	154272723	154275701	789624	7	266,263,188,52,107,91,260,	0,825,1263,2439,2643,2882,3105,
#Partially deleted in new
chr1	154272588	154275784	chr1:154272588-154275784	1	+	154272723	154275701	789624	7	188,119,188,52,107,91,169,	0,891,1185,2361,2565,2804,3027,
#Partially deleted in new
chr1	154272608	154275873	chr1:154272608-154275873	1	+	154272723	154275701	789624	7	168,263,212,52,107,91,258,	0,727,1141,2341,2545,2784,3007,
#Partially deleted in new
chr1	154272619	154275663	chr1:154272619-154275663	0	+	154272723	154275237	789624	7	157,199,188,52,107,91,48,	0,716,1154,2330,2534,2773,2996,
#Partially deleted in new
chr1	154272628	154275875	chr1:154272628-154275875	0	+	154272628	154272628	8553170	6	148,626,52,107,91,260,	0,707,2321,2525,2764,2987,
#Partially deleted in new
chr1	154272636	154275272	chr1:154272636-154275272	0	+	154272636	154272636	8553170	3	140,626,323,	0,699,2313,
#Partially deleted in new
chr1	154272667	154275483	chr1:154272667-154275483	0	+	154272723	154275483	789624	6	109,199,188,52,183,91,	0,668,1106,2282,2410,2725,
#Partially deleted in new
chr1	154272667	154275839	chr1:154272667-154275839	1	+	154273841	154275701	789624	6	109,188,52,107,91,224,	0,1106,2282,2486,2725,2948,
#Partially deleted in new
chr1	154272867	154275484	chr1:154272867-154275484	0	+	154272867	154272867	8553170	5	731,188,52,107,92,	0,906,2082,2286,2525,
#Partially deleted in new
chr1	154273868	154275873	chr1:154273868-154275873	0	+	154273868	154273868	8553170	4	93,52,330,258,	0,1081,1285,1747,
#Partially deleted in new
chr1	154273897	154275875	chr1:154273897-154275875	0	+	154273897	154273897	8553170	4	64,311,91,260,	0,1052,1495,1718,
#Deleted in new
chr1	154288459	154288527	chr1:154288459-154288527	3	+	154288459	154288459	8553170	1	68,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	154295502	154295601	chr1:154295502-154295601	3	+	154295502	154295502	8553170	1	99,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	154297649	154297748	chr1:154297649-154297748	3	+	154297649	154297649	8553170	1	99,	0,
#Deleted in new
chr1	154312461	154313084	chr1:154312461-154313084	7	+	154312461	154312461	16724991	2	105,129,	0,494,
#Partially deleted in new
chr1	154321089	154324042	chr1:154321089-154324042	0	+	154321089	154321089	8553170	4	171,138,119,454,	0,1892,2151,2499,
#Partially deleted in new
chr1	154321115	154325325	chr1:154321115-154325325	3	+	154321155	154324480	789624	6	145,127,138,119,218,1044,	0,817,1866,2125,2473,3166,
#Partially deleted in new
chr1	154321119	154325325	chr1:154321119-154325325	1	+	154321155	154323894	789624	5	141,127,138,119,1737,	0,813,1862,2121,2469,
#Partially deleted in new
chr1	154325552	154337846	chr1:154325552-154337846	1	+	154328141	154337674	789624	12	150,68,59,114,99,62,73,71,80,159,89,499,	0,2552,4843,5262,5495,5891,6053,6401,7065,8554,8950,11795,
#Partially deleted in new
chr1	154325604	154330702	chr1:154325604-154330702	0	+	154325604	154325604	8553170	3	98,68,307,	0,2500,4791,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr1	154327799	154351307	chr1:154327799-154351307	3	+	154327799	154349118	789624	28	62,68,59,114,99,62,73,71,80,159,89,197,209,44,166,189,116,165,112,106,145,184,224,84,246,139,131,2468,	0,305,2596,3015,3248,3644,3806,4154,4818,6307,6703,9548,13054,14680,14996,15313,15653,16093,16343,16595,16841,17171,17522,18000,18431,18820,20608,21040,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	154328798	154341788	chr1:154328798-154341788	0	+	154328798	154328798	8553170	14	277,59,114,99,62,73,71,80,159,89,197,7,209,622,	0,1597,2016,2249,2645,2807,3155,3819,5308,5704,8549,11738,12055,12368,
#Partially deleted in new
chr1	154331486	154331979	chr1:154331486-154331979	0	+	154331486	154331486	8553170	2	192,26,	0,467,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	154338742	154338802	chr1:154338742-154338802	3	+	154338742	154338742	8553170	1	60,	0,
#Partially deleted in new
chr1	154346614	154349459	chr1:154346614-154349459	0	+	154346614	154346614	8553170	3	144,131,620,	0,1793,2225,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	154376965	154379273	chr1:154376965-154379273	7	-	154376965	154376965	16724991	3	45,152,120,	0,987,2188,
#Deleted in new
chr1	154378206	154379089	chr1:154378206-154379089	7	-	154378206	154378206	16724991	1	883,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	154402327	154406564	chr1:154402327-154406564	3	-	154402327	154402327	789624	2	1630,126,	0,4111,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	154405192	154469450	chr1:154405192-154469450	3	+	154405629	154465380	0	10	522,249,124,182,167,142,47,70,94,4317,	0,24003,25290,29326,29797,30776,42932,44718,49295,59941,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	154405192	154437544	chr1:154405192-154437544	1	+	154405629	154437544	789624	7	522,249,124,182,167,142,110,	0,24003,25290,29326,29797,30776,32242,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	154405222	154466877	chr1:154405222-154466877	1	+	154405629	154465165	0	9	492,249,124,182,167,142,47,70,1744,	0,23973,25260,29296,29767,30746,42902,44688,59911,
#Partially deleted in new
chr1	154405614	154434583	chr1:154405614-154434583	0	+	154405629	154434583	789624	4	100,249,113,65,	0,23581,24868,28904,
#Partially deleted in new
chr1	154414368	154415137	chr1:154414368-154415137	7	-	154414368	154414368	16724991	1	769,	0,
#Partially deleted in new
chr1	154429342	154449979	chr1:154429342-154449979	0	+	154429342	154449979	789624	8	102,124,182,167,142,48,47,69,	0,1140,5176,5647,6626,15704,18782,20568,
#Partially deleted in new
chr1	154434652	154454583	chr1:154434652-154454583	0	+	154434652	154454583	789624	6	48,167,142,47,70,96,	0,337,1316,13472,15258,19835,
#Partially deleted in new
chr1	154435009	154465314	chr1:154435009-154465314	0	+	154435009	154435009	8553170	5	147,47,70,94,181,	0,13115,14901,19478,30124,
#Partially deleted in new
chr1	154454108	154465248	chr1:154454108-154465248	0	+	154454108	154454108	8553170	2	473,115,	0,11025,
#Partially deleted in new
chr1	154469771	154486044	chr1:154469771-154486044	0	-	154470340	154486044	789624	2	591,102,	0,16171,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	154479480	154502113	chr1:154479480-154502113	3	-	154484148	154502026	789624	6	4855,120,157,306,127,678,	0,6462,7046,9570,19631,21955,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	154479480	154489166	chr1:154479480-154489166	0	-	154485938	154489166	789624	3	6582,157,116,	0,7046,9570,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	154480011	154481501	chr1:154480011-154481501	3	+	154480011	154480011	8553170	2	47,634,	0,856,
#Partially deleted in new
chr1	154502218	154548147	chr1:154502218-154548147	3	+	154506903	154547710	789624	13	811,29,80,59,71,157,43,91,148,146,155,71,470,	0,4658,5022,6204,18085,19104,39805,40512,41744,42153,42576,45190,45459,
#Partially deleted in new
chr1	154502971	154548147	chr1:154502971-154548147	1	+	154506903	154547557	789624	12	58,29,80,59,71,157,43,91,148,146,155,739,	0,3905,4269,5451,17332,18351,39052,39759,40991,41400,41823,44437,
#Partially deleted in new
chr1	154521365	154548147	chr1:154521365-154548147	0	+	154521365	154521365	8553170	8	114,43,91,148,146,155,160,470,	0,20658,21365,22597,23006,23429,26043,26312,
#Partially deleted in new
chr1	154534540	154547479	chr1:154534540-154547479	0	+	154534540	154534540	8553170	6	64,43,91,148,155,71,	0,7483,8190,9422,10254,12868,
#Partially deleted in new
chr1	154541910	154544833	chr1:154541910-154544833	0	+	154541910	154541910	8553170	4	156,148,146,39,	0,2052,2461,2884,
#Deleted in new
chr1	154548576	154558633	chr1:154548576-154558633	3	-	154550437	154558553	0	13	1893,67,96,49,59,91,61,85,141,51,105,105,407,	0,2361,2820,3194,3344,3516,3827,4159,4455,6158,6851,7283,9650,
#Deleted in new
chr1	154550408	154552820	chr1:154550408-154552820	0	-	154550408	154550408	8553170	5	61,67,96,61,85,	0,529,988,1995,2327,
#Deleted in new
chr1	154550952	154551857	chr1:154550952-154551857	0	-	154550952	154550952	8553170	3	52,96,87,	0,444,818,
#Deleted in new
chr1	154551222	154551801	chr1:154551222-154551801	0	-	154551222	154551222	8553170	2	270,31,	0,548,
#Deleted in new
chr1	154551459	154553076	chr1:154551459-154553076	0	-	154551459	154551459	8553170	6	33,49,59,91,417,45,	0,311,461,633,944,1572,
#Deleted in new
chr1	154551750	154552375	chr1:154551750-154552375	0	-	154551750	154551750	8553170	2	69,455,	0,170,
#Deleted in new
chr1	154552381	154559028	chr1:154552381-154559028	0	-	154552381	154552381	8553170	8	83,85,141,51,105,105,139,121,	0,354,650,2353,3046,3478,5845,6526,
#Deleted in new
chr1	154553608	154555017	chr1:154553608-154555017	3	+	154553608	154553608	789624	2	64,368,	0,1041,
#Partially deleted in new
chr1	154567780	154580026	chr1:154567780-154580026	3	+	154568044	154575932	0	6	328,146,45,110,973,4265,	0,1681,2011,2477,3408,7981,
#Partially deleted in new
chr1	154567795	154579821	chr1:154567795-154579821	0	+	154568044	154576699	789624	9	313,146,45,110,973,167,216,248,1747,	0,1666,1996,2462,3393,7966,8852,9210,10279,
#Partially deleted in new
chr1	154567834	154576597	chr1:154567834-154576597	1	+	154568044	154575932	789624	6	274,146,51,110,973,836,	0,1627,1957,2423,3354,7927,
#Deleted in new
chr1	154569527	154570275	chr1:154569527-154570275	0	+	154569527	154569796	789624	3	80,64,18,	0,245,730,
#Deleted in new
chr1	154576808	154579262	chr1:154576808-154579262	0	+	154576808	154576808	8553170	2	55,1188,	0,1266,
#Deleted in new
chr1	154579064	154579663	chr1:154579064-154579663	3	-	154579064	154579064	8553170	2	274,47,	0,552,
#Partially deleted in new
chr1	154582056	154608186	chr1:154582056-154608186	1	-	154584805	154608006	0	15	2987,128,113,183,134,123,94,172,226,191,145,149,184,1586,195,	0,3160,3696,4124,6068,6494,7312,7700,8127,14748,15066,15771,16345,18984,25935,
#Partially deleted in new
chr1	154582060	154627980	chr1:154582060-154627980	1	-	154584805	154601756	789624	15	2983,128,113,183,134,123,94,172,226,191,145,149,184,1586,126,	0,3156,3692,4120,6064,6490,7308,7696,8123,14744,15062,15767,16341,18980,45794,
#Partially deleted in new
chr1	154582061	154608248	chr1:154582061-154608248	1	-	154584805	154608006	789624	15	2982,128,113,183,134,123,94,172,226,191,145,149,184,1586,257,	0,3155,3691,4119,6063,6489,7307,7695,8122,14743,15061,15766,16340,18979,25930,
#Partially deleted in new
chr1	154582066	154627968	chr1:154582066-154627968	1	-	154584805	154601756	0	15	2977,128,113,183,134,123,94,172,226,191,145,149,184,1586,114,	0,3150,3686,4114,6058,6484,7302,7690,8117,14738,15056,15761,16335,18974,45788,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	154582066	154606300	chr1:154582066-154606300	1	-	154584805	154601756	789624	15	2977,128,113,183,134,123,94,172,226,191,145,149,184,1586,295,	0,3150,3686,4114,6058,6484,7302,7690,8117,14738,15056,15761,16335,18974,23939,
#Partially deleted in new
chr1	154582079	154602397	chr1:154582079-154602397	0	-	154589899	154602397	8553170	14	2964,128,113,183,134,123,94,172,68,191,145,149,184,1357,	0,3137,3673,4101,6045,6471,7289,7677,8262,14725,15043,15748,16322,18961,
#Partially deleted in new
chr1	154582095	154627976	chr1:154582095-154627976	1	-	154584805	154601756	8553170	16	2948,128,113,183,134,123,94,172,226,191,145,149,184,1208,242,23,	0,3121,3657,4085,6029,6455,7273,7661,8088,14709,15027,15732,16306,18945,20289,45858,
#Partially deleted in new
chr1	154582106	154627609	chr1:154582106-154627609	1	-	154584805	154601756	8553170	15	2937,128,113,183,134,123,94,172,226,191,145,149,184,1586,174,	0,3110,3646,4074,6018,6444,7262,7650,8077,14698,15016,15721,16295,18934,45329,
#Partially deleted in new
chr1	154582106	154628013	chr1:154582106-154628013	1	-	154584805	154601756	8553170	15	2937,128,113,183,134,123,94,172,226,191,145,149,184,1586,60,	0,3110,3646,4074,6018,6444,7262,7650,8077,14698,15016,15721,16295,18934,45847,
#Partially deleted in new
chr1	154582106	154608797	chr1:154582106-154608797	1	-	154584805	154601756	8553170	15	2937,128,113,183,134,123,94,172,226,191,145,149,184,1586,47,	0,3110,3646,4074,6018,6444,7262,7650,8077,14698,15016,15721,16295,18934,26644,
#Partially deleted in new
chr1	154582110	154628004	chr1:154582110-154628004	2	-	154582110	154582110	8553170	13	2933,649,183,549,94,172,226,191,145,149,184,1586,51,	0,3106,4070,6014,7258,7646,8073,14694,15012,15717,16291,18930,45843,
#Partially deleted in new
chr1	154582229	154608170	chr1:154582229-154608170	1	-	154584805	154608006	789624	15	2814,128,113,183,134,123,94,172,148,191,145,149,184,1586,179,	0,2987,3523,3951,5895,6321,7139,7527,8032,14575,14893,15598,16172,18811,25762,
#Partially deleted in new
chr1	154583011	154602571	chr1:154583011-154602571	0	-	154584805	154602571	8553170	14	2032,128,113,183,134,123,94,172,148,134,145,149,184,1531,	0,2205,2741,3169,5113,5539,6357,6745,7250,13793,14111,14816,15390,18029,
#Partially deleted in new
chr1	154584349	154589777	chr1:154584349-154589777	0	-	154586819	154589777	8553170	9	694,128,113,183,307,134,123,94,21,	0,867,1403,1831,2285,3775,4201,5019,5407,
#Deleted in new
chr1	154584633	154585418	chr1:154584633-154585418	0	-	154584633	154584633	8553170	2	410,202,	0,583,
#Partially deleted in new
chr1	154585646	154588280	chr1:154585646-154588280	0	-	154585646	154585646	8553170	3	219,183,156,	0,534,2478,
#Partially deleted in new
chr1	154585992	154588602	chr1:154585992-154588602	0	-	154585992	154585992	8553170	2	371,478,	0,2132,
#Partially deleted in new
chr1	154589861	154608114	chr1:154589861-154608114	0	-	154589861	154589861	8553170	7	548,191,145,149,184,1208,123,	0,6943,7261,7966,8540,11179,18130,
#Partially deleted in new
chr1	154597264	154608825	chr1:154597264-154608825	0	-	154597264	154601756	8553170	5	3,149,184,1208,75,	0,563,1137,3776,11486,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	154600176	154627986	chr1:154600176-154627986	0	-	154600176	154600176	8553170	3	2072,242,33,	0,2208,27777,
#Partially deleted in new
chr1	154602055	154627583	chr1:154602055-154627583	0	-	154602055	154602055	8553170	3	193,242,148,	0,329,25380,
#Partially deleted in new
chr1	154602077	154627912	chr1:154602077-154627912	0	-	154602077	154602077	8553170	3	171,242,58,	0,307,25777,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	154602203	154606018	chr1:154602203-154606018	0	-	154602203	154602203	8553170	3	45,242,15,	0,181,3800,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	154697454	154870280	chr1:154697454-154870280	3	-	154707975	154869964	789624	8	10818,70,128,111,142,419,96,1249,	0,16009,17421,28461,35548,74520,124634,171577,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	154697473	154870278	chr1:154697473-154870278	1	-	154707975	154869964	789624	9	10799,70,128,111,142,45,419,96,1247,	0,15990,17402,28442,35529,39570,74501,124615,171558,
#Partially deleted in new
chr1	154702728	154708226	chr1:154702728-154708226	0	-	154702728	154702728	8553170	3	227,105,200,	0,4947,5298,
#Partially deleted in new
chr1	154707425	154859843	chr1:154707425-154859843	1	-	154707975	154859712	789624	8	847,70,128,111,142,419,96,149,	0,6038,7450,18490,25577,64549,114663,152269,
#Partially deleted in new
chr1	154707951	154868319	chr1:154707951-154868319	1	-	154707975	154822178	789624	8	321,70,128,111,142,419,96,371,	0,5512,6924,17964,25051,64023,114137,159997,
#Partially deleted in new
chr1	154924733	154936991	chr1:154924733-154936991	3	-	154925128	154936685	0	5	532,130,153,64,401,	0,1620,4290,7618,11857,
#Deleted in new
chr1	154937369	154938059	chr1:154937369-154938059	3	+	154937369	154937369	8553170	1	690,	0,
#Partially deleted in new
chr1	154944075	154956121	chr1:154944075-154956121	1	-	154945023	154951885	789624	10	1042,1232,132,71,24,234,166,65,125,53,	0,1496,3341,3566,3906,4057,7156,7395,7719,11993,
#Partially deleted in new
chr1	154944079	154956104	chr1:154944079-154956104	3	-	154945023	154953721	789624	11	1038,1232,132,71,24,234,166,65,127,87,36,	0,1492,3337,3562,3902,4053,7152,7391,7715,9591,11989,
#Partially deleted in new
chr1	154947097	154956111	chr1:154947097-154956111	1	-	154947245	154953721	789624	9	451,71,24,141,166,65,127,87,43,	0,544,884,1128,4134,4373,4697,6573,8971,
#Partially deleted in new
chr1	154947418	154953757	chr1:154947418-154953757	0	-	154947418	154947418	8553170	7	130,71,24,234,166,65,87,	0,223,563,714,3813,4052,6252,
#Partially deleted in new
chr1	154947652	154956123	chr1:154947652-154956123	0	-	154948366	154953721	789624	8	60,24,269,166,65,127,87,55,	0,329,480,3579,3818,4142,6018,8416,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	154950209	154950492	chr1:154950209-154950492	3	-	154950209	154950209	8553170	1	283,	0,
#Deleted in new
chr1	154951228	154953757	chr1:154951228-154953757	0	-	154951228	154951228	8553170	3	169,451,87,	0,242,2442,
#Partially deleted in new
chr1	154957025	154961748	chr1:154957025-154961748	3	-	154958778	154961576	0	3	2821,50,275,	0,3951,4448,
#Partially deleted in new
chr1	154958739	154962036	chr1:154958739-154962036	1	-	154958778	154961018	789624	3	1107,50,149,	0,2237,3148,
#Partially deleted in new
chr1	154959637	154963853	chr1:154959637-154963853	0	-	154959637	154959637	8553170	3	209,50,335,	0,1339,3881,
#Deleted in new
chr1	154961824	154962623	chr1:154961824-154962623	3	+	154961824	154961824	8553170	1	799,	0,
#Partially deleted in new
chr1	154962297	154970741	chr1:154962297-154970741	1	-	154963802	154970526	0	12	1634,239,132,70,199,127,52,54,120,64,71,710,	0,3245,3648,3864,4021,5373,5682,5906,6197,6473,7080,7734,
#Partially deleted in new
chr1	154962297	154970747	chr1:154962297-154970747	1	-	154963802	154968557	789624	10	1634,239,132,70,199,127,52,54,100,272,	0,3245,3648,3864,4021,5373,5682,5906,6197,8178,
#Partially deleted in new
chr1	154962297	154974376	chr1:154962297-154974376	1	-	154963802	154970196	0	13	1634,239,132,70,199,127,52,54,120,64,71,168,129,	0,3245,3648,3864,4021,5373,5682,5906,6197,6473,7080,7734,11950,
#Partially deleted in new
chr1	154962297	154974376	chr1:154962297-154974376	3	-	154963802	154970196	0	13	1634,239,135,70,199,127,52,54,120,64,71,168,129,	0,3245,3648,3864,4021,5373,5682,5906,6197,6473,7080,7734,11950,
#Partially deleted in new
chr1	154962297	154970747	chr1:154962297-154970747	1	-	154963802	154970526	0	12	1634,239,135,70,199,127,52,54,120,64,71,716,	0,3245,3648,3864,4021,5373,5682,5906,6197,6473,7080,7734,
#Partially deleted in new
chr1	154963328	154965762	chr1:154963328-154965762	0	-	154963328	154963328	8553170	2	603,124,	0,2310,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	154963676	154966490	chr1:154963676-154966490	0	-	154964089	154966490	789624	5	692,239,132,70,172,	0,1866,2269,2485,2642,
#Partially deleted in new
chr1	154965991	154968893	chr1:154965991-154968893	0	-	154965991	154968557	789624	7	89,70,199,127,52,120,123,	0,170,327,1679,1988,2503,2779,
#Partially deleted in new
chr1	154966424	154968874	chr1:154966424-154968874	0	-	154966424	154968557	789624	6	93,127,52,54,120,104,	0,1246,1555,1779,2070,2346,
#Partially deleted in new
chr1	154967669	154974336	chr1:154967669-154974336	0	-	154967669	154970196	789624	7	128,52,120,64,71,168,89,	0,310,825,1101,1708,2362,6578,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	154968501	154974395	chr1:154968501-154974395	0	-	154968501	154970196	789624	6	113,64,71,168,216,148,	0,269,876,1530,4791,5746,
#Partially deleted in new
chr1	154974652	154979248	chr1:154974652-154979248	1	+	154974901	154978777	789624	3	260,128,524,	0,3334,4072,
#Partially deleted in new
chr1	154974682	154978684	chr1:154974682-154978684	1	+	154974745	154978131	789624	2	122,698,	0,3304,
#Partially deleted in new
chr1	154974698	154979249	chr1:154974698-154979249	3	+	154974745	154978777	0	3	106,128,525,	0,3288,4026,
#Partially deleted in new
chr1	154975031	154979125	chr1:154975031-154979125	0	+	154975031	154975031	8553170	3	73,128,401,	0,2955,3693,
#Partially deleted in new
chr1	154975530	154979241	chr1:154975530-154979241	0	+	154975530	154975530	8553170	3	94,128,517,	0,2456,3194,
#Partially deleted in new
chr1	154975538	154978916	chr1:154975538-154978916	0	+	154975538	154975538	8553170	3	70,128,192,	0,2448,3186,
#Partially deleted in new
chr1	154975692	154975783	chr1:154975692-154975783	3	+	154975692	154975692	5263520	1	91,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	154977298	154979074	chr1:154977298-154979074	0	+	154977298	154977298	8553170	2	816,350,	0,1426,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	154983337	154988132	chr1:154983337-154988132	0	+	154983337	154983337	8553170	2	60,667,	0,4128,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	154983351	154991206	chr1:154983351-154991206	1	+	154983694	154990264	789624	4	715,745,148,1048,	0,4753,6208,6807,
#Partially deleted in new
chr1	154983358	154993111	chr1:154983358-154993111	3	+	154983985	154993037	789624	8	39,225,745,148,99,190,74,210,	0,483,4746,6201,6800,6980,9354,9543,
#Partially deleted in new
chr1	154983364	154993111	chr1:154983364-154993111	1	+	154983985	154992790	789624	7	33,225,745,148,99,190,399,	0,477,4740,6195,6794,6974,9348,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	154983366	154989012	chr1:154983366-154989012	1	+	154988029	154988914	789624	3	31,225,1547,	0,475,4099,
#Partially deleted in new
chr1	154983372	154993111	chr1:154983372-154993111	1	+	154983694	154993037	789624	7	694,745,148,99,190,74,210,	0,4732,6187,6786,6966,9340,9529,
#Partially deleted in new
chr1	154983430	154988433	chr1:154983430-154988433	0	+	154983430	154983430	8553170	3	203,225,329,	0,411,4674,
#Partially deleted in new
chr1	154988056	154993111	chr1:154988056-154993111	1	+	154988533	154992662	789624	4	793,99,109,210,	0,2102,4508,4845,
#Partially deleted in new
chr1	154988540	154993111	chr1:154988540-154993111	1	+	154990351	154993037	789624	5	309,148,370,74,210,	0,1019,1618,4172,4361,
#Partially deleted in new
chr1	154988584	154993111	chr1:154988584-154993111	0	+	154988584	154988584	8553170	4	265,99,74,210,	0,1574,4128,4317,
#Partially deleted in new
chr1	154990212	154993111	chr1:154990212-154993111	0	+	154990212	154990212	8553170	4	45,190,109,210,	0,126,2352,2689,
#Deleted in new
chr1	154992588	154993111	chr1:154992588-154993111	0	+	154992588	154992588	8553170	2	198,210,	0,313,
#Deleted in new
chr1	154993585	154994315	chr1:154993585-154994315	0	+	154993607	154993793	789624	2	263,386,	0,344,
#Deleted in new
chr1	154993587	154994142	chr1:154993587-154994142	3	+	154993607	154993793	789624	1	555,	0,
#Deleted in new
chr1	155002629	155018522	chr1:155002629-155018522	1	+	155010919	155016685	789624	5	314,140,100,1160,2303,	0,7628,8286,12025,13590,
#Deleted in new
chr1	155002629	155018522	chr1:155002629-155018522	3	+	155014660	155016685	789624	3	314,1160,2303,	0,12025,13590,
#Deleted in new
chr1	155002656	155018522	chr1:155002656-155018522	1	+	155014660	155016685	789624	4	30,101,1160,2303,	0,186,11998,13563,
#Deleted in new
chr1	155002725	155015309	chr1:155002725-155015309	0	+	155002725	155002725	8553170	2	218,655,	0,11929,
#Deleted in new
chr1	155002839	155014968	chr1:155002839-155014968	0	+	155002839	155002839	8553170	4	104,140,100,314,	0,7418,8076,11815,
#Deleted in new
chr1	155002844	155014719	chr1:155002844-155014719	0	+	155002844	155002844	8553170	3	99,79,65,	0,11170,11810,
#Deleted in new
chr1	155014447	155016981	chr1:155014447-155016981	1	+	155014660	155016685	789624	2	1367,762,	0,1772,
#Partially deleted in new
chr1	155018519	155033781	chr1:155018519-155033781	0	-	155023570	155033701	789624	16	241,141,94,68,128,131,101,168,165,158,214,66,198,102,171,348,	0,4597,4844,5033,5312,5952,7782,8028,10713,11564,11912,12649,13054,14147,14574,14914,
#Partially deleted in new
chr1	155018530	155031202	chr1:155018530-155031202	0	-	155018530	155018530	8553170	10	230,141,94,128,131,101,168,165,158,771,	0,4586,4833,5301,5941,7771,8017,10702,11553,11901,
#Partially deleted in new
chr1	155018532	155033760	chr1:155018532-155033760	3	-	155018543	155033701	789624	15	228,141,94,128,131,101,168,165,158,214,66,198,102,171,327,	0,4584,4831,5299,5939,7769,8015,10700,11551,11899,12636,13041,14134,14561,14901,
#Partially deleted in new
chr1	155018582	155026593	chr1:155018582-155026593	0	-	155023945	155026593	789624	5	178,141,94,128,46,	0,4534,4781,5249,7965,
#Partially deleted in new
chr1	155023384	155026769	chr1:155023384-155026769	0	-	155023384	155023384	8553170	4	73,128,101,222,	0,447,2917,3163,
#Partially deleted in new
chr1	155033823	155050930	chr1:155033823-155050930	3	+	155034036	155050868	789624	17	31,126,126,75,129,140,217,144,122,158,100,96,127,117,143,114,314,	0,148,611,829,5579,6661,7573,7890,8911,9528,12069,12301,12536,13372,13963,14233,16793,
#Partially deleted in new
chr1	155033823	155048139	chr1:155033823-155048139	0	+	155034058	155047205	789624	15	31,126,223,75,129,140,217,144,122,158,100,96,127,124,83,	0,148,514,829,5579,6661,7573,7890,8911,9528,12069,12301,12536,13365,14233,
#Partially deleted in new
chr1	155033828	155050930	chr1:155033828-155050930	1	+	155034036	155050868	789624	16	26,126,126,129,140,217,144,122,158,100,96,127,117,143,114,314,	0,143,606,5574,6656,7568,7885,8906,9523,12064,12296,12531,13367,13958,14228,16788,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	155033940	155035235	chr1:155033940-155035235	0	+	155033940	155033940	8553170	3	157,126,583,	0,494,712,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	155033969	155049264	chr1:155033969-155049264	1	+	155034036	155049119	789624	16	128,126,75,129,140,217,144,122,158,100,96,127,117,143,114,271,	0,465,683,5433,6515,7427,7744,8765,9382,11923,12155,12390,13226,13817,14087,15024,
#Deleted in new
chr1	155045190	155046118	chr1:155045190-155046118	3	-	155045190	155045190	8553170	2	663,159,	0,769,
#Partially deleted in new
chr1	155050565	155056238	chr1:155050565-155056238	0	+	155050565	155050565	8553170	9	357,107,77,79,77,193,63,69,159,	0,2105,2851,3344,3584,3748,5224,5366,5514,
#Partially deleted in new
chr1	155050680	155053992	chr1:155050680-155053992	0	+	155050680	155050680	8553170	4	226,158,77,83,	0,1939,2736,3229,
#Partially deleted in new
chr1	155050726	155056146	chr1:155050726-155056146	0	+	155050726	155050726	8553170	9	196,107,77,79,77,193,151,69,67,	0,1944,2690,3183,3423,3587,4975,5205,5353,
#Partially deleted in new
chr1	155050945	155062775	chr1:155050945-155062775	0	+	155050945	155050945	8553170	22	1832,77,79,77,193,63,69,170,85,149,175,93,305,196,78,73,139,70,72,72,125,316,	0,2471,2964,3204,3368,4844,4986,5134,5440,6007,6242,6691,6905,7300,7764,8956,9259,9817,10472,10958,11299,11514,
#Partially deleted in new
chr1	155051285	155062758	chr1:155051285-155062758	1	+	155051386	155062502	789624	22	180,107,77,79,77,193,63,69,170,85,149,175,93,305,196,78,73,139,70,75,125,299,	0,1385,2131,2624,2864,3028,4504,4646,4794,5100,5667,5902,6351,6565,6960,7424,8616,8919,9477,10129,10959,11174,
#Partially deleted in new
chr1	155051285	155062758	chr1:155051285-155062758	3	+	155051386	155062502	789624	23	180,107,77,79,77,193,63,69,170,85,149,175,93,305,196,78,73,139,70,75,72,125,299,	0,1385,2131,2624,2864,3028,4504,4646,4794,5100,5667,5902,6351,6565,6960,7424,8616,8919,9477,10129,10618,10959,11174,
#Partially deleted in new
chr1	155051285	155062758	chr1:155051285-155062758	1	+	155051386	155062502	789624	22	180,107,77,79,77,193,63,69,170,85,149,175,93,305,196,78,73,139,70,72,125,299,	0,1385,2131,2624,2864,3028,4504,4646,4794,5100,5667,5902,6351,6565,6960,7424,8616,8919,9477,10618,10959,11174,
#Partially deleted in new
chr1	155051285	155062758	chr1:155051285-155062758	1	+	155051386	155062356	789624	20	180,107,77,79,77,193,63,69,170,85,149,175,93,305,196,78,73,139,125,299,	0,1385,2131,2624,2864,3028,4504,4646,4794,5100,5667,5902,6351,6565,6960,7424,8616,8919,10959,11174,
#Partially deleted in new
chr1	155051285	155062758	chr1:155051285-155062758	1	+	155051386	155062356	789624	21	180,107,77,79,77,193,63,69,170,85,149,175,93,305,196,78,73,139,72,125,299,	0,1385,2131,2624,2864,3028,4504,4646,4794,5100,5667,5902,6351,6565,6960,7424,8616,8919,10132,10959,11174,
#Partially deleted in new
chr1	155051285	155062758	chr1:155051285-155062758	1	+	155051386	155062502	789624	23	180,107,77,79,77,193,63,69,170,85,149,175,93,305,196,78,73,139,70,72,72,125,299,	0,1385,2131,2624,2864,3028,4504,4646,4794,5100,5667,5902,6351,6565,6960,7424,8616,8919,9477,10132,10618,10959,11174,
#Partially deleted in new
chr1	155051285	155062758	chr1:155051285-155062758	0	+	155051386	155062020	789624	23	180,107,77,79,77,193,63,69,170,85,149,175,93,305,196,78,73,139,70,75,214,125,299,	0,1385,2131,2624,2864,3028,4504,4646,4794,5100,5667,5902,6351,6565,6960,7424,8616,8919,9477,10129,10618,10959,11174,
#Partially deleted in new
chr1	155051285	155062758	chr1:155051285-155062758	0	+	155051386	155062020	789624	22	180,107,77,79,77,193,63,69,170,85,149,175,93,305,196,78,73,139,70,214,125,299,	0,1385,2131,2624,2864,3028,4504,4646,4794,5100,5667,5902,6351,6565,6960,7424,8616,8919,9477,10618,10959,11174,
#Partially deleted in new
chr1	155051302	155054148	chr1:155051302-155054148	0	+	155051302	155051302	8553170	5	163,107,77,79,66,	0,1368,2114,2607,2780,
#Partially deleted in new
chr1	155051303	155053988	chr1:155051303-155053988	0	+	155051303	155051303	8553170	3	162,107,79,	0,1367,2606,
#Partially deleted in new
chr1	155051305	155062775	chr1:155051305-155062775	1	+	155051386	155062502	789624	21	160,107,77,79,77,193,63,69,170,85,149,175,93,305,196,78,73,139,70,125,316,	0,1365,2111,2604,2844,3008,4484,4626,4774,5080,5647,5882,6331,6545,6940,7404,8596,8899,9457,10939,11154,
#Partially deleted in new
chr1	155051307	155061758	chr1:155051307-155061758	0	+	155051307	155051307	8553170	20	158,158,77,79,77,193,63,69,170,85,149,175,93,305,196,78,73,139,70,344,	0,1312,2109,2602,2842,3006,4482,4624,4772,5078,5645,5880,6329,6543,6938,7402,8594,8897,9455,10107,
#Partially deleted in new
chr1	155051315	155062769	chr1:155051315-155062769	1	+	155051386	155062502	789624	14	150,107,77,14,164,93,305,196,78,73,139,70,125,310,	0,1355,2101,2594,5883,6321,6535,6930,7394,8586,8889,9447,10929,11144,
#Partially deleted in new
chr1	155051315	155053978	chr1:155051315-155053978	0	+	155051315	155051315	8553170	4	150,261,77,69,	0,1201,2101,2594,
#Partially deleted in new
chr1	155051325	155057100	chr1:155051325-155057100	0	+	155051325	155051325	8553170	10	140,107,77,79,77,193,69,170,85,148,	0,1345,2091,2584,2824,2988,4606,4754,5060,5627,
#Partially deleted in new
chr1	155051350	155062669	chr1:155051350-155062669	1	+	155051386	155062502	789624	21	115,137,77,79,77,193,63,69,170,85,149,175,93,305,196,78,73,139,70,125,210,	0,1290,2066,2559,2799,2963,4439,4581,4729,5035,5602,5837,6286,6500,6895,7359,8551,8854,9412,10894,11109,
#Partially deleted in new
chr1	155051350	155054323	chr1:155051350-155054323	0	+	155051350	155051350	8553170	5	115,107,77,79,174,	0,1320,2066,2559,2799,
#Partially deleted in new
chr1	155051351	155058683	chr1:155051351-155058683	1	+	155051386	155058474	789624	15	114,29,107,79,77,193,63,69,170,85,149,175,93,305,438,	0,1179,1319,2558,2798,2962,4438,4580,4728,5034,5601,5836,6285,6499,6894,
#Partially deleted in new
chr1	155051353	155062768	chr1:155051353-155062768	0	+	155051353	155051353	8553170	23	112,107,77,79,77,193,66,69,170,85,149,175,93,305,196,78,73,139,70,75,72,125,309,	0,1317,2063,2556,2796,2960,4433,4578,4726,5032,5599,5834,6283,6497,6892,7356,8548,8851,9409,10061,10550,10891,11106,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	155055408	155056407	chr1:155055408-155056407	0	+	155055408	155055408	8553170	4	444,69,170,22,	0,523,671,977,
#Deleted in new
chr1	155055801	155056261	chr1:155055801-155056261	0	+	155055801	155055801	8553170	2	51,330,	0,130,
#Deleted in new
chr1	155056095	155057227	chr1:155056095-155057227	0	+	155056095	155056095	8553170	3	375,149,40,	0,857,1092,
#Partially deleted in new
chr1	155058238	155062747	chr1:155058238-155062747	0	+	155058238	155058238	8553170	9	203,78,73,139,70,72,71,125,288,	0,471,1663,1966,2524,3179,3337,4006,4221,
#Partially deleted in new
chr1	155058245	155062704	chr1:155058245-155062704	0	+	155058245	155058245	8553170	9	196,78,73,139,70,72,71,125,245,	0,464,1656,1959,2517,3172,3330,3999,4214,
#Partially deleted in new
chr1	155058709	155062775	chr1:155058709-155062775	0	+	155058709	155058709	8553170	5	78,73,139,125,316,	0,1192,1495,3535,3750,
#Partially deleted in new
chr1	155058752	155061446	chr1:155058752-155061446	0	+	155058752	155058752	8553170	6	35,73,139,70,80,32,	0,1149,1452,2010,2361,2662,
#Deleted in new
chr1	155060265	155061332	chr1:155060265-155061332	0	+	155060265	155060265	8553170	3	78,70,219,	0,497,848,
#Deleted in new
chr1	155062160	155062775	chr1:155062160-155062775	0	+	155062160	155062160	8553170	2	209,316,	0,299,
#Partially deleted in new
chr1	155063730	155069553	chr1:155063730-155069553	3	+	155063823	155068989	789624	4	206,287,69,701,	0,2999,3641,5122,
#Partially deleted in new
chr1	155063736	155069538	chr1:155063736-155069538	1	+	155063823	155069111	789624	4	200,287,69,540,	0,2993,3635,5262,
#Partially deleted in new
chr1	155063747	155086807	chr1:155063747-155086807	3	+	155063823	155086543	789624	5	189,314,66,78,395,	0,21343,22129,22380,22665,
#Partially deleted in new
chr1	155063760	155069538	chr1:155063760-155069538	1	+	155063823	155069173	789624	4	176,287,69,520,	0,2969,3611,5258,
#Deleted in new
chr1	155078871	155087538	chr1:155078871-155087538	3	+	155078941	155086543	789624	5	198,314,66,78,1126,	0,6219,7005,7256,7541,
#Deleted in new
chr1	155085515	155086982	chr1:155085515-155086982	0	+	155085515	155085515	8553170	3	127,66,570,	0,361,897,
#Deleted in new
chr1	155085521	155086923	chr1:155085521-155086923	0	+	155085521	155085521	8553170	4	121,66,78,511,	0,355,606,891,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	155120489	155120598	chr1:155120489-155120598	3	+	155120489	155120489	8553170	1	109,	0,
#Partially deleted in new
chr1	155127459	155134857	chr1:155127459-155134857	3	+	155127977	155134067	0	5	610,296,66,51,903,	0,3879,6043,6270,6495,
#Partially deleted in new
chr1	155127875	155134857	chr1:155127875-155134857	1	+	155127977	155134067	0	4	194,296,51,903,	0,3463,5854,6079,
#Partially deleted in new
chr1	155127887	155134486	chr1:155127887-155134486	0	+	155127887	155127887	8553170	4	182,296,278,532,	0,3451,5615,6067,
#Partially deleted in new
chr1	155129561	155134307	chr1:155129561-155134307	0	+	155129561	155129561	8553170	5	317,296,66,51,353,	0,1777,3941,4168,4393,
#Partially deleted in new
chr1	155131203	155134125	chr1:155131203-155134125	0	+	155131203	155131203	8553170	4	431,66,51,171,	0,2299,2526,2751,
#Partially deleted in new
chr1	155135343	155138368	chr1:155135343-155138368	1	+	155135671	155138281	789624	5	337,78,162,120,189,	0,955,2217,2635,2836,
#Partially deleted in new
chr1	155135356	155138462	chr1:155135356-155138462	0	+	155135356	155135356	8553170	6	242,78,124,144,120,283,	0,942,1471,2222,2622,2823,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	155135390	155138751	chr1:155135390-155138751	0	+	155135671	155137646	8553170	6	290,78,124,162,120,572,	0,908,1437,2170,2588,2789,
#Partially deleted in new
chr1	155135392	155137596	chr1:155135392-155137596	0	+	155135392	155135392	8553170	4	300,78,124,36,	0,906,1435,2168,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	155135811	155138857	chr1:155135811-155138857	1	+	155135952	155138281	789624	5	180,78,162,120,678,	0,487,1749,2167,2368,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	155135811	155138857	chr1:155135811-155138857	1	+	155135952	155138281	789624	5	161,124,162,120,678,	0,1016,1749,2167,2368,
#Partially deleted in new
chr1	155135827	155138415	chr1:155135827-155138415	0	+	155135911	155137594	8553170	5	164,78,162,120,254,	0,471,1733,2151,2334,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	155135849	155138852	chr1:155135849-155138852	1	+	155135911	155138281	789624	5	142,78,124,120,673,	0,449,978,2129,2330,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	155135849	155138853	chr1:155135849-155138853	3	+	155135911	155138281	789624	6	142,78,124,162,120,674,	0,449,978,1711,2129,2330,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	155135857	155138851	chr1:155135857-155138851	0	+	155135911	155137594	8553170	5	134,78,162,120,672,	0,441,1703,2121,2322,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	155135858	155138851	chr1:155135858-155138851	0	+	155135911	155137988	8553170	4	133,78,120,672,	0,440,2120,2321,
#Partially deleted in new
chr1	155135866	155138440	chr1:155135866-155138440	0	+	155135911	155136380	8553170	6	125,98,124,162,120,261,	0,432,961,1694,2112,2313,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	155135896	155137131	chr1:155135896-155137131	0	+	155135896	155135896	8553170	2	95,833,	0,402,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	155136315	155138574	chr1:155136315-155138574	0	+	155136315	155136315	8553170	3	81,120,395,	0,1663,1864,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	155138047	155138853	chr1:155138047-155138853	0	+	155138047	155138047	8553170	3	51,330,94,	0,132,712,
#Deleted in new
chr1	155139890	155140595	chr1:155139890-155140595	3	-	155139961	155140240	789624	2	381,105,	0,600,
#Deleted in new
chr1	155139890	155140407	chr1:155139890-155140407	1	-	155139961	155140330	789624	1	517,	0,
#Deleted in new
chr1	155139890	155140544	chr1:155139890-155140544	1	-	155139961	155140240	789624	2	355,54,	0,600,
#Partially deleted in new
chr1	155148543	155148813	chr1:155148543-155148813	7	+	155148543	155148543	16724991	1	270,	0,
#Partially deleted in new
chr1	155169407	155173333	chr1:155169407-155173333	3	-	155169439	155173302	789624	5	153,67,64,155,113,	0,383,3157,3330,3813,
#Partially deleted in new
chr1	155169407	155172777	chr1:155169407-155172777	0	-	155169407	155169407	8553170	5	153,67,139,64,40,	0,383,2943,3157,3330,
#Partially deleted in new
chr1	155169407	155173238	chr1:155169407-155173238	0	-	155169407	155169407	8553170	4	153,67,64,501,	0,383,3157,3330,
#Partially deleted in new
chr1	155169407	155173475	chr1:155169407-155173475	0	-	155169407	155169407	8553170	5	153,67,64,155,159,	0,383,3157,3330,3909,
#Partially deleted in new
chr1	155169407	155173254	chr1:155169407-155173254	0	-	155169407	155169407	8553170	5	153,71,64,155,34,	0,379,3157,3330,3813,
#Partially deleted in new
chr1	155169408	155173251	chr1:155169408-155173251	0	-	155169408	155169408	8553170	4	152,67,328,31,	0,382,3156,3812,
#Partially deleted in new
chr1	155169408	155187272	chr1:155169408-155187272	3	-	155173437	155187272	789624	5	152,67,328,158,48,	0,382,3156,3908,17816,
#Partially deleted in new
chr1	155169408	155173268	chr1:155169408-155173268	0	-	155169408	155169408	8553170	3	211,155,48,	0,3329,3812,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	155169408	155173305	chr1:155169408-155173305	0	-	155169408	155169408	8553170	4	152,2699,328,85,	0,382,3156,3812,
#Partially deleted in new
chr1	155169469	155173257	chr1:155169469-155173257	0	-	155169469	155169469	8553170	4	91,67,64,49,	0,321,3095,3739,
#Partially deleted in new
chr1	155169469	155173261	chr1:155169469-155173261	0	-	155169469	155169469	8553170	5	91,67,64,155,53,	0,321,3095,3268,3739,
#Partially deleted in new
chr1	155173786	155184971	chr1:155173786-155184971	1	+	155174617	155184190	789624	11	243,41,262,344,144,75,188,122,303,298,1175,	0,814,1599,2101,3145,3408,4281,4705,5845,8065,10010,
#Partially deleted in new
chr1	155173786	155184971	chr1:155173786-155184971	1	+	155175940	155184190	789624	9	243,344,144,96,254,122,303,298,1175,	0,2101,3145,3408,4215,4705,5845,8065,10010,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	155173877	155180621	chr1:155173877-155180621	1	+	155173966	155180502	789624	9	152,262,344,144,96,254,122,303,187,	0,1508,2010,3054,3317,4124,4614,5754,6557,
#Partially deleted in new
chr1	155173890	155179935	chr1:155173890-155179935	1	+	155173966	155179805	789624	9	139,262,344,144,96,254,122,38,304,	0,1495,1997,3041,3304,4111,4601,4918,5741,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	155173899	155182862	chr1:155173899-155182862	1	+	155173966	155182198	789624	9	130,262,344,144,96,254,122,303,1011,	0,1486,1988,3032,3295,4102,4592,5732,7952,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	155173899	155182862	chr1:155173899-155182862	0	+	155173899	155173899	8553170	10	130,262,344,144,96,254,122,38,303,1011,	0,1486,1988,3032,3295,4102,4592,4909,5732,7952,
#Partially deleted in new
chr1	155173908	155184969	chr1:155173908-155184969	1	+	155175391	155184190	789624	10	131,262,344,144,96,254,122,303,298,1173,	0,1477,1979,3023,3286,4093,4583,5723,7943,9888,
#Partially deleted in new
chr1	155173966	155184971	chr1:155173966-155184971	3	+	155173966	155184190	789624	10	63,262,344,144,96,254,122,303,298,1175,	0,1419,1921,2965,3228,4035,4525,5665,7885,9830,
#Deleted in new
chr1	155174600	155178156	chr1:155174600-155178156	0	+	155174600	155174600	8553170	6	41,262,344,144,96,155,	0,785,1287,2331,2594,3401,
#Partially deleted in new
chr1	155174753	155184951	chr1:155174753-155184951	0	+	155174753	155174753	789624	12	215,87,262,344,144,96,254,122,38,303,298,1155,	0,432,632,1134,2178,2441,3248,3738,4055,4878,7098,9043,
#Partially deleted in new
chr1	155174753	155184971	chr1:155174753-155184971	1	+	155174813	155184190	789624	10	84,262,344,144,96,254,122,303,298,1175,	0,632,1134,2178,2441,3248,3738,4878,7098,9043,
#Deleted in new
chr1	155185823	155192915	chr1:155185823-155192915	1	-	155186134	155192843	789624	8	386,150,122,137,56,454,376,130,	0,1401,1631,1898,2184,2339,6084,6962,
#Deleted in new
chr1	155185825	155192915	chr1:155185825-155192915	1	-	155186134	155192843	789624	7	384,150,122,137,56,128,130,	0,1399,1629,1896,2182,6357,6960,
#Deleted in new
chr1	155185825	155192915	chr1:155185825-155192915	1	-	155186134	155192843	789624	7	384,150,122,137,50,128,130,	0,1399,1629,1896,2337,6357,6960,
#Deleted in new
chr1	155185825	155192915	chr1:155185825-155192915	1	-	155186134	155192843	789624	11	384,150,122,137,56,825,850,308,383,825,130,	0,1399,1629,1896,2182,2337,3404,4672,5129,5633,6960,
#Deleted in new
chr1	155185825	155192915	chr1:155185825-155192915	1	-	155186134	155192843	789624	5	384,150,84,275,130,	0,1399,1629,6174,6960,
#Deleted in new
chr1	155185825	155192915	chr1:155185825-155192915	1	-	155186134	155192843	789624	8	384,150,122,137,56,454,403,130,	0,1399,1629,1896,2182,2337,6082,6960,
#Deleted in new
chr1	155185825	155192915	chr1:155185825-155192915	1	-	155187569	155192843	789624	7	384,150,122,56,123,128,130,	0,1399,1629,2182,2337,6357,6960,
#Deleted in new
chr1	155185825	155192915	chr1:155185825-155192915	1	-	155186134	155192843	789624	6	384,150,90,69,128,130,	0,1399,1629,2337,6357,6960,
#Deleted in new
chr1	155185826	155188351	chr1:155185826-155188351	0	-	155186771	155188351	789624	7	383,75,150,122,137,56,189,	0,903,1398,1628,1895,2181,2336,
#Deleted in new
chr1	155185829	155187767	chr1:155185829-155187767	0	-	155187252	155187767	789624	4	380,150,90,46,	0,1395,1625,1892,
#Deleted in new
chr1	155185947	155192893	chr1:155185947-155192893	1	-	155186134	155192843	789624	8	262,150,122,137,56,69,128,108,	0,1277,1507,1774,2060,2215,6235,6838,
#Deleted in new
chr1	155185947	155192893	chr1:155185947-155192893	1	-	155187252	155192843	789624	7	262,150,137,56,123,101,108,	0,1277,1774,2060,2215,6235,6838,
#Deleted in new
chr1	155185947	155192893	chr1:155185947-155192893	1	-	155186134	155192843	789624	7	262,150,122,137,47,101,108,	0,1277,1507,1774,2060,6235,6838,
#Deleted in new
chr1	155185947	155192893	chr1:155185947-155192893	1	-	155186771	155192843	789624	9	262,75,150,122,137,56,123,128,108,	0,782,1277,1507,1774,2060,2215,6235,6838,
#Deleted in new
chr1	155185947	155192893	chr1:155185947-155192893	1	-	155188166	155192843	789624	9	262,150,122,137,56,50,176,128,108,	0,1277,1507,1774,2060,2215,2380,6235,6838,
#Deleted in new
chr1	155185947	155192893	chr1:155185947-155192893	0	-	155188166	155192843	789624	9	262,150,122,137,56,50,176,101,108,	0,1277,1507,1774,2060,2215,2380,6235,6838,
#Deleted in new
chr1	155186122	155192868	chr1:155186122-155192868	3	-	155186134	155192843	789624	8	87,150,122,137,56,123,101,83,	0,1102,1332,1599,1885,2040,6060,6663,
#Deleted in new
chr1	155186122	155192867	chr1:155186122-155192867	1	-	155186134	155192843	789624	5	87,150,90,128,82,	0,1102,1332,6060,6663,
#Deleted in new
chr1	155186122	155192867	chr1:155186122-155192867	1	-	155186134	155192843	789624	7	87,150,122,56,50,101,82,	0,1102,1332,1885,2040,6060,6663,
#Deleted in new
chr1	155186122	155192867	chr1:155186122-155192867	1	-	155186134	155192843	789624	5	87,150,123,101,82,	0,1102,2040,6060,6663,
#Deleted in new
chr1	155186122	155192867	chr1:155186122-155192867	1	-	155186134	155192843	789624	8	87,150,122,137,56,69,101,82,	0,1102,1332,1599,1885,2040,6060,6663,
#Deleted in new
chr1	155186122	155192867	chr1:155186122-155192867	1	-	155186134	155192843	789624	5	87,150,69,128,82,	0,1102,2040,6060,6663,
#Deleted in new
chr1	155186122	155192867	chr1:155186122-155192867	1	-	155186134	155192843	789624	7	87,150,122,137,50,101,82,	0,1102,1332,1599,2040,6060,6663,
#Deleted in new
chr1	155186122	155192867	chr1:155186122-155192867	0	-	155187569	155192843	789624	6	87,150,122,50,128,82,	0,1102,1332,2040,6060,6663,
#Deleted in new
chr1	155186122	155192867	chr1:155186122-155192867	1	-	155187298	155192843	789624	7	87,150,90,56,69,101,82,	0,1102,1332,1885,2040,6060,6663,
#Deleted in new
chr1	155186122	155192867	chr1:155186122-155192867	0	-	155187569	155192843	789624	7	87,150,122,56,69,101,82,	0,1102,1332,1885,2040,6060,6663,
#Deleted in new
chr1	155186707	155187831	chr1:155186707-155187831	0	-	155186707	155186707	8553170	3	667,122,110,	0,747,1014,
#Deleted in new
chr1	155191862	155192909	chr1:155191862-155192909	0	-	155191862	155191862	8553170	2	448,124,	0,923,
#Deleted in new
chr1	155192201	155192916	chr1:155192201-155192916	0	-	155192201	155192201	8553170	2	46,131,	0,584,
#Partially deleted in new
chr1	155195003	155200346	chr1:155195003-155200346	3	+	155195003	155195003	8553170	4	365,167,216,175,	0,1847,3399,5168,
#Deleted in new
chr1	155195176	155195272	chr1:155195176-155195272	3	+	155195176	155195176	5263520	1	96,	0,
#Partially deleted in new
chr1	155195587	155207897	chr1:155195587-155207897	3	-	155195840	155207876	789624	23	312,140,173,197,49,179,194,53,119,160,108,111,153,78,141,149,52,83,27,103,257,207,100,	0,399,1453,1875,2292,2454,2821,4216,4407,4863,5309,5506,5829,6369,6673,7224,7498,7635,7925,9267,9472,10612,12210,
#Deleted in new
chr1	155195587	155196442	chr1:155195587-155196442	0	-	155195587	155195587	8553170	2	312,456,	0,399,
#Partially deleted in new
chr1	155195589	155207981	chr1:155195589-155207981	1	-	155195840	155207876	789624	22	310,140,173,197,49,179,194,53,119,160,108,111,153,78,141,149,52,83,103,257,207,184,	0,397,1451,1873,2290,2452,2819,4214,4405,4861,5307,5504,5827,6367,6671,7222,7496,7633,9265,9470,10610,12208,
#Partially deleted in new
chr1	155195665	155207917	chr1:155195665-155207917	1	-	155195840	155207876	789624	21	234,140,173,197,49,179,194,53,119,160,108,111,153,78,141,149,52,83,27,207,120,	0,321,1375,1797,2214,2376,2743,4138,4329,4785,5231,5428,5751,6291,6595,7146,7420,7557,7847,10534,12132,
#Partially deleted in new
chr1	155195790	155207899	chr1:155195790-155207899	1	-	155195840	155201120	789624	22	109,140,173,197,49,179,194,53,119,160,108,111,153,158,141,149,52,83,27,257,214,102,	0,196,1250,1672,2089,2251,2618,4013,4204,4660,5106,5303,5626,6166,6470,7021,7295,7432,7722,9269,10402,12007,
#Deleted in new
chr1	155195844	155197622	chr1:155195844-155197622	0	-	155195844	155195844	8553170	3	55,140,582,	0,142,1196,
#Partially deleted in new
chr1	155197896	155207899	chr1:155197896-155207899	0	-	155200008	155207876	789624	15	32,179,329,53,119,108,111,153,78,141,149,45,27,207,102,	0,145,512,1907,2098,3000,3197,3520,4060,4364,4915,5196,5616,8303,9901,
#Partially deleted in new
chr1	155198070	155200049	chr1:155198070-155200049	0	-	155198070	155198070	8553170	4	191,194,49,55,	0,338,1733,1924,
#Partially deleted in new
chr1	155198159	155200275	chr1:155198159-155200275	0	+	155198159	155198159	8553170	2	459,104,	0,2012,
#Partially deleted in new
chr1	155198426	155200571	chr1:155198426-155200571	0	+	155198426	155198426	8553170	2	192,400,	0,1745,
#Partially deleted in new
chr1	155198583	155205495	chr1:155198583-155205495	0	+	155198583	155198583	8553170	5	35,140,127,149,461,	0,1588,2116,4539,6451,
#Partially deleted in new
chr1	155200237	155205306	chr1:155200237-155205306	0	+	155200237	155200237	8553170	3	74,127,272,	0,462,4797,
#Partially deleted in new
chr1	155200455	155209051	chr1:155200455-155209051	0	-	155200455	155200455	8553170	14	155,108,111,153,78,141,149,45,83,27,103,257,207,146,	0,441,638,961,1501,1805,2356,2637,2767,3057,4399,4604,5744,8450,
#Partially deleted in new
chr1	155200616	155202254	chr1:155200616-155202254	0	-	155200616	155200616	8553170	3	388,153,298,	0,800,1340,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	155200801	155205367	chr1:155200801-155205367	1	+	155200801	155200801	8553170	6	25,167,70,101,149,333,	0,917,1231,1524,2321,4233,
#Partially deleted in new
chr1	155200898	155203305	chr1:155200898-155203305	0	-	155200898	155200898	8553170	8	106,111,153,91,141,149,45,83,	0,195,518,1058,1362,1913,2194,2324,
#Deleted in new
chr1	155208698	155213823	chr1:155208698-155213823	3	+	155208804	155213698	789624	8	634,70,80,93,183,77,155,340,	0,1647,1849,3428,3686,3995,4538,4785,
#Deleted in new
chr1	155208796	155213823	chr1:155208796-155213823	1	+	155208804	155213698	789624	7	536,70,80,183,77,155,340,	0,1549,1751,3588,3897,4440,4687,
#Deleted in new
chr1	155209237	155213656	chr1:155209237-155213656	0	+	155209251	155212403	789624	8	95,90,80,93,183,77,155,173,	0,1108,1310,2889,3147,3456,3999,4246,
#Deleted in new
chr1	155209246	155213824	chr1:155209246-155213824	1	+	155209251	155213698	789624	8	86,70,80,93,183,77,155,341,	0,1099,1301,2880,3138,3447,3990,4237,
#Deleted in new
chr1	155209250	155213823	chr1:155209250-155213823	0	+	155209250	155209250	8553170	7	82,70,1672,183,77,155,340,	0,1095,1297,3134,3443,3986,4233,
#Deleted in new
chr1	155210847	155213708	chr1:155210847-155213708	0	+	155210847	155210847	8553170	7	47,155,93,183,77,155,225,	0,544,1279,1537,1846,2389,2636,
#Deleted in new
chr1	155211150	155213819	chr1:155211150-155213819	3	-	155211150	155211150	8553170	2	388,180,	0,2489,
#Deleted in new
chr1	155212454	155213739	chr1:155212454-155213739	0	+	155212454	155212454	8553170	3	316,155,256,	0,782,1029,
#Partially deleted in new
chr1	155213820	155218924	chr1:155213820-155218924	5	-	155213820	155213820	16724991	8	653,117,109,225,646,134,961,77,	0,747,1233,1742,2563,3419,3698,5027,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	155213824	155227422	chr1:155213824-155227422	7	-	155213824	155213824	16724991	11	649,117,109,89,26,238,173,134,86,211,41,	0,743,1229,1738,1937,2559,3032,3415,4139,11052,13557,
#Partially deleted in new
chr1	155213824	155218943	chr1:155213824-155218943	4	-	155213824	155213824	16724991	12	649,117,109,89,26,238,173,134,75,86,92,96,	0,743,1229,1738,1937,2559,3032,3415,3694,4139,4563,5023,
#Partially deleted in new
chr1	155213825	155219018	chr1:155213825-155219018	4	-	155213825	155213825	16724991	10	648,117,347,89,26,238,173,810,92,171,	0,742,1228,1737,1936,2558,3031,3414,4562,5022,
#Partially deleted in new
chr1	155213825	155218473	chr1:155213825-155218473	4	-	155213825	155213825	16724991	10	648,117,109,225,238,173,134,75,86,18,	0,742,1228,1737,2558,3031,3414,3693,4138,4630,
#Partially deleted in new
chr1	155214367	155218874	chr1:155214367-155218874	5	-	155214367	155214367	16724991	11	106,117,109,225,238,173,134,142,187,88,27,	0,200,686,1195,2016,2489,2872,3337,3596,4024,4480,
#Partially deleted in new
chr1	155216383	155218248	chr1:155216383-155218248	4	-	155216383	155216383	16724991	4	238,173,134,285,	0,473,856,1580,
#Partially deleted in new
chr1	155216896	155219023	chr1:155216896-155219023	4	-	155216896	155216896	16724991	4	133,134,86,176,	0,343,1067,1951,
#Deleted in new
chr1	155230974	155234325	chr1:155230974-155234325	7	+	155230974	155230974	16724991	7	35,80,93,183,77,155,215,	0,167,1778,2036,2345,2889,3136,
#Partially deleted in new
chr1	155234451	155244670	chr1:155234451-155244670	3	-	155234994	155241112	0	12	649,117,164,225,238,173,134,147,192,88,95,165,	0,743,1229,1793,2889,3682,4065,5164,5434,6178,6634,10054,
#Partially deleted in new
chr1	155234451	155241234	chr1:155234451-155241234	1	-	155234994	155241112	0	11	649,117,164,225,238,173,134,147,192,88,149,	0,743,1229,1793,2889,3682,4065,5164,5434,6178,6634,
#Deleted in new
chr1	155234452	155235835	chr1:155234452-155235835	0	-	155234452	155234452	8553170	2	369,190,	0,1193,
#Partially deleted in new
chr1	155234558	155241275	chr1:155234558-155241275	1	-	155234994	155241112	0	10	542,117,164,225,238,173,134,192,88,190,	0,636,1122,1686,2782,3575,3958,5327,6071,6527,
#Partially deleted in new
chr1	155234867	155244699	chr1:155234867-155244699	1	-	155234994	155239931	0	10	233,117,164,225,238,173,134,147,192,194,	0,327,813,1377,2473,3266,3649,4748,5018,9638,
#Deleted in new
chr1	155234960	155236459	chr1:155234960-155236459	0	-	155234960	155234960	8553170	3	140,650,215,	0,234,1284,
#Partially deleted in new
chr1	155235015	155241231	chr1:155235015-155241231	0	-	155235015	155235015	8553170	7	85,117,164,44,105,88,146,	0,179,665,1229,4957,5614,6070,
#Partially deleted in new
chr1	155236181	155238709	chr1:155236181-155238709	0	-	155236181	155236181	8553170	4	288,238,173,193,	0,1159,1952,2335,
#Partially deleted in new
chr1	155236395	155239962	chr1:155236395-155239962	0	-	155236395	155236395	8553170	5	74,238,173,134,77,	0,945,1738,2121,3490,
#Deleted in new
chr1	155237931	155238891	chr1:155237931-155238891	0	-	155237931	155237931	8553170	2	375,375,	0,585,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	155238212	155244636	chr1:155238212-155244636	0	-	155238212	155238212	8553170	8	94,134,147,192,88,95,139,131,	0,304,1403,1673,2417,2873,5882,6293,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	155238563	155244622	chr1:155238563-155244622	0	-	155238563	155238563	8553170	7	87,147,192,88,95,136,117,	0,1052,1322,2066,2522,5531,5942,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	155239634	155244606	chr1:155239634-155244606	0	-	155239634	155239634	8553170	6	128,77,88,95,136,101,	0,251,995,1451,4460,4871,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	155239959	155241243	chr1:155239959-155241243	0	-	155239959	155239959	8553170	4	118,123,88,158,	0,217,670,1126,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	155247204	155254960	chr1:155247204-155254960	1	-	155247781	155254877	789624	9	751,254,69,546,70,100,173,108,308,	0,845,1200,3071,3890,4297,4528,6420,7448,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	155247216	155255387	chr1:155247216-155255387	3	-	155247781	155254877	789624	12	739,254,69,546,70,100,173,108,120,111,57,735,	0,833,1188,3059,3878,4285,4516,6408,6642,6867,7183,7436,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	155247216	155251808	chr1:155247216-155251808	0	-	155247216	155247216	8553170	7	739,254,69,654,70,100,76,	0,833,1188,3059,3878,4285,4516,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	155247216	155254968	chr1:155247216-155254968	1	-	155247781	155254877	789624	11	739,254,69,546,70,100,176,108,120,111,316,	0,833,1188,3059,3878,4285,4516,6408,6642,6867,7436,
#Partially deleted in new
chr1	155247395	155255483	chr1:155247395-155255483	1	-	155247395	155254877	789624	5	134,89,173,108,831,	0,4117,4337,6229,7257,
#Partially deleted in new
chr1	155247426	155255191	chr1:155247426-155255191	0	-	155248270	155254877	789624	5	529,254,69,108,539,	0,623,978,6198,7226,
#Partially deleted in new
chr1	155248073	155254908	chr1:155248073-155254908	0	-	155248073	155254877	789624	7	230,69,70,100,173,108,256,	0,331,3021,3428,3659,5551,6579,
#Deleted in new
chr1	155250587	155252068	chr1:155250587-155252068	0	-	155250587	155250587	8553170	3	234,70,567,	0,507,914,
#Partially deleted in new
chr1	155250693	155254964	chr1:155250693-155254964	0	-	155250693	155250693	8553170	7	128,70,100,173,108,57,312,	0,401,808,1039,2931,3706,3959,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	155252748	155255483	chr1:155252748-155255483	0	-	155252748	155252748	8553170	5	984,120,111,57,831,	0,1110,1335,1651,1904,
#Partially deleted in new
chr1	155255978	155262259	chr1:155255978-155262259	3	-	155256272	155262151	789624	9	441,118,102,160,129,121,123,78,174,	0,695,1306,1519,2847,4351,4558,5678,6107,
#Partially deleted in new
chr1	155255978	155258915	chr1:155255978-155258915	0	-	155255978	155255978	8553170	3	441,118,90,	0,695,2847,
#Partially deleted in new
chr1	155255980	155262430	chr1:155255980-155262430	1	-	155256272	155262151	789624	8	439,118,102,160,129,121,123,345,	0,693,1304,1517,2845,4349,4556,6105,
#Partially deleted in new
chr1	155256006	155260450	chr1:155256006-155260450	0	-	155256006	155256006	8553170	6	413,118,89,160,129,121,	0,667,1291,1491,2819,4323,
#Partially deleted in new
chr1	155256240	155260652	chr1:155256240-155260652	0	-	155256240	155256240	8553170	6	179,118,102,160,129,323,	0,433,1044,1257,2585,4089,
#Partially deleted in new
chr1	155257284	155262227	chr1:155257284-155262227	0	-	155257284	155257284	8553170	6	102,160,67,121,123,142,	0,213,1541,3045,3252,4801,
#Partially deleted in new
chr1	155257285	155261868	chr1:155257285-155261868	0	-	155257285	155257285	8553170	6	101,160,102,121,123,212,	0,212,1505,3044,3251,4371,
#Partially deleted in new
chr1	155258825	155262339	chr1:155258825-155262339	0	-	155258825	155258825	8553170	5	129,121,123,78,394,	0,1504,1711,2831,3120,
#Deleted in new
chr1	155261226	155262329	chr1:155261226-155262329	0	-	155261226	155261226	8553170	2	508,244,	0,859,
#Partially deleted in new
chr1	155262867	155273287	chr1:155262867-155273287	3	-	155263217	155270977	0	13	533,91,80,83,130,95,167,117,67,85,229,170,87,	0,1082,1353,1600,1777,2992,3861,5142,5425,5840,6620,7940,10333,
#Partially deleted in new
chr1	155262867	155273516	chr1:155262867-155273516	1	-	155263217	155270977	0	13	533,91,80,83,130,95,167,117,67,88,229,170,316,	0,1082,1353,1600,1777,2992,3861,5142,5425,5840,6620,7940,10333,
#Partially deleted in new
chr1	155262873	155273482	chr1:155262873-155273482	1	-	155263217	155270977	789624	13	527,91,80,83,130,95,167,117,67,85,226,170,282,	0,1076,1347,1594,1771,2986,3855,5136,5419,5834,6614,7934,10327,
#Partially deleted in new
chr1	155262873	155273329	chr1:155262873-155273329	0	-	155262873	155262873	8553170	12	527,91,80,83,130,95,167,117,67,229,170,129,	0,1076,1347,1594,1771,2986,3855,5136,5419,6614,7934,10327,
#Partially deleted in new
chr1	155262879	155269363	chr1:155262879-155269363	0	-	155262879	155262879	8553170	7	521,601,130,95,167,117,1071,	0,1070,1765,2980,3849,5130,5413,
#Partially deleted in new
chr1	155268093	155278491	chr1:155268093-155278491	0	-	155268093	155268093	8553170	6	33,67,88,226,170,117,	0,199,614,1394,2714,10281,
#Partially deleted in new
chr1	155269165	155270841	chr1:155269165-155270841	0	-	155269165	155269165	8553170	2	551,34,	0,1642,
#Partially deleted in new
chr1	155277582	155289848	chr1:155277582-155289848	3	+	155277590	155288463	789624	8	286,430,162,219,147,241,165,2068,	0,4828,6391,6956,7582,8141,9590,10198,
#Partially deleted in new
chr1	155277698	155289847	chr1:155277698-155289847	0	+	155277698	155277698	8553170	8	170,430,784,147,241,89,927,457,	0,4712,6275,7466,8025,9550,10082,11692,
#Partially deleted in new
chr1	155282537	155287903	chr1:155282537-155287903	0	+	155282537	155282537	8553170	5	303,219,147,165,123,	0,2001,2627,4635,5243,
#Deleted in new
chr1	155288603	155289518	chr1:155288603-155289518	0	+	155288603	155288603	8553170	2	404,128,	0,787,
#Partially deleted in new
chr1	155289292	155301438	chr1:155289292-155301438	1	-	155290571	155301395	0	11	1386,182,167,153,151,271,187,132,92,183,143,	0,2463,3884,4145,4942,5189,5823,6144,6372,10805,12003,
#Partially deleted in new
chr1	155289838	155301001	chr1:155289838-155301001	3	-	155290571	155300887	0	11	840,182,167,153,151,271,187,132,92,183,121,	0,1917,3338,3599,4396,4643,5277,5598,5826,10259,11042,
#Partially deleted in new
chr1	155295134	155300956	chr1:155295134-155300956	0	-	155295134	155300188	789624	5	168,132,92,112,76,	0,302,530,4963,5746,
#Partially deleted in new
chr1	155308747	155320666	chr1:155308747-155320666	1	+	155317973	155320609	789624	9	218,141,81,123,89,73,78,135,258,	0,3507,9193,9421,9917,10108,10863,11046,11661,
#Partially deleted in new
chr1	155308754	155319688	chr1:155308754-155319688	0	+	155308754	155308754	8553170	8	211,142,141,81,123,89,73,78,	0,1309,3500,9186,9414,9910,10101,10856,
#Partially deleted in new
chr1	155308793	155320609	chr1:155308793-155320609	1	+	155310064	155320609	0	10	172,163,141,81,123,89,73,78,135,201,	0,1249,3461,9147,9375,9871,10062,10817,11000,11615,
#Partially deleted in new
chr1	155308802	155318663	chr1:155308802-155318663	0	+	155308802	155308802	8553170	5	163,142,141,81,495,	0,1261,3452,9138,9366,
#Partially deleted in new
chr1	155308851	155320665	chr1:155308851-155320665	3	+	155309789	155320609	0	11	114,177,163,141,81,123,89,73,78,135,257,	0,937,1191,3403,9089,9317,9813,10004,10759,10942,11557,
#Partially deleted in new
chr1	155308862	155318473	chr1:155308862-155318473	0	+	155308862	155308862	8553170	4	103,141,81,305,	0,3392,9078,9306,
#Partially deleted in new
chr1	155308888	155320647	chr1:155308888-155320647	1	+	155310064	155320609	0	10	77,142,141,81,123,89,73,78,135,239,	0,1175,3366,9052,9280,9776,9967,10722,10905,11520,
#Partially deleted in new
chr1	155308892	155318518	chr1:155308892-155318518	0	+	155308892	155308892	8553170	5	73,163,141,81,350,	0,1150,3362,9048,9276,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	155308913	155312979	chr1:155308913-155312979	0	+	155308913	155308913	8553170	2	1292,725,	0,3341,
#Partially deleted in new
chr1	155308913	155318905	chr1:155308913-155318905	0	+	155309789	155318905	789624	8	52,213,163,141,81,123,89,50,	0,839,1129,3341,9027,9255,9751,9942,
#Partially deleted in new
chr1	155308915	155320665	chr1:155308915-155320665	1	+	155309789	155320609	0	11	161,177,163,141,81,123,89,73,78,135,257,	0,873,1127,3339,9025,9253,9749,9940,10695,10878,11493,
#Partially deleted in new
chr1	155308958	155317982	chr1:155308958-155317982	0	+	155309789	155317982	789624	5	118,213,163,141,42,	0,794,1084,3296,8982,
#Partially deleted in new
chr1	155308967	155318814	chr1:155308967-155318814	0	+	155308967	155308967	8553170	6	109,142,141,81,123,150,	0,1096,3287,8973,9201,9697,
#Partially deleted in new
chr1	155308969	155320637	chr1:155308969-155320637	1	+	155310064	155320609	0	10	107,142,141,81,123,89,73,78,135,229,	0,1094,3285,8971,9199,9695,9886,10641,10824,11439,
#Partially deleted in new
chr1	155308983	155318687	chr1:155308983-155318687	0	+	155308983	155308983	8553170	5	93,142,141,81,519,	0,1080,3271,8957,9185,
#Partially deleted in new
chr1	155308984	155318928	chr1:155308984-155318928	0	+	155308984	155308984	8553170	7	92,142,141,81,123,89,73,	0,1079,3270,8956,9184,9680,9871,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	155316862	155321544	chr1:155316862-155321544	1	-	155316862	155316862	8553170	4	1143,132,151,410,	0,1402,2940,4272,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	155317432	155321527	chr1:155317432-155321527	0	-	155317432	155317432	8553170	2	964,393,	0,3702,
#Partially deleted in new
chr1	155317945	155324168	chr1:155317945-155324168	3	-	155317945	155317945	8553170	6	60,132,130,71,195,91,	0,319,1857,3679,4297,6132,
#Partially deleted in new
chr1	155318174	155319885	chr1:155318174-155319885	0	+	155318174	155318174	8553170	4	117,89,73,275,	0,490,681,1436,
#Partially deleted in new
chr1	155318187	155320665	chr1:155318187-155320665	0	+	155318187	155318187	8553170	6	104,89,73,78,72,257,	0,477,668,1423,1669,2221,
#Partially deleted in new
chr1	155318718	155320665	chr1:155318718-155320665	0	+	155318718	155318718	8553170	4	210,78,135,257,	0,892,1075,1690,
#Partially deleted in new
chr1	155319654	155320609	chr1:155319654-155320609	0	+	155319654	155319654	8553170	2	274,201,	0,754,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	155320158	155324176	chr1:155320158-155324176	1	-	155320158	155320158	789624	2	1537,99,	0,3919,
#Partially deleted in new
chr1	155320895	155331112	chr1:155320895-155331112	1	+	155321773	155330571	0	10	96,1443,99,77,175,106,47,235,126,710,	0,792,3949,4206,4420,4671,4968,6002,7254,9507,
#Partially deleted in new
chr1	155320926	155331114	chr1:155320926-155331114	1	+	155321773	155330571	0	10	65,1443,99,77,175,106,47,553,126,712,	0,761,3918,4175,4389,4640,4937,5653,7223,9476,
#Partially deleted in new
chr1	155323011	155326734	chr1:155323011-155326734	0	+	155323011	155323011	8553170	6	119,99,389,106,47,155,	0,1833,2090,2555,2852,3568,
#Partially deleted in new
chr1	155323524	155327028	chr1:155323524-155327028	0	+	155324894	155327028	789624	7	203,99,77,175,106,47,449,	0,1320,1577,1791,2042,2339,3055,
#Partially deleted in new
chr1	155323936	155331114	chr1:155323936-155331114	1	+	155324417	155330571	0	9	608,99,77,175,106,47,553,126,712,	0,908,1165,1379,1630,1927,2643,4213,6466,
#Partially deleted in new
chr1	155324277	155326922	chr1:155324277-155326922	0	+	155324894	155326922	789624	7	87,99,77,175,106,47,343,	0,567,824,1038,1289,1586,2302,
#Partially deleted in new
chr1	155324440	155330729	chr1:155324440-155330729	0	+	155324440	155324440	8553170	7	104,99,389,106,1269,126,327,	0,404,661,1126,1423,3709,5962,
#Partially deleted in new
chr1	155324512	155331112	chr1:155324512-155331112	3	+	155324894	155330571	0	9	75,99,77,175,106,47,553,126,710,	0,332,589,803,1054,1351,2067,3637,5890,
#Partially deleted in new
chr1	155324518	155326815	chr1:155324518-155326815	0	+	155324518	155324518	8553170	5	291,389,106,47,236,	0,583,1048,1345,2061,
#Partially deleted in new
chr1	155324521	155330730	chr1:155324521-155330730	1	+	155326791	155330571	789624	8	288,77,175,106,47,553,126,328,	0,580,794,1045,1342,2058,3628,5881,
#Partially deleted in new
chr1	155324522	155328275	chr1:155324522-155328275	0	+	155324894	155328275	789624	8	65,99,77,175,106,47,235,126,	0,322,579,793,1044,1341,2375,3627,
#Partially deleted in new
chr1	155324526	155326730	chr1:155324526-155326730	0	+	155324894	155325617	789624	7	61,99,77,175,72,47,151,	0,318,575,789,1074,1337,2053,
#Partially deleted in new
chr1	155324538	155331114	chr1:155324538-155331114	1	+	155327043	155330571	789624	8	271,77,175,106,47,235,126,712,	0,563,777,1028,1325,2359,3611,5864,
#Partially deleted in new
chr1	155324576	155331114	chr1:155324576-155331114	1	+	155324894	155330571	0	8	367,77,175,106,47,553,126,712,	0,525,739,990,1287,2003,3573,5826,
#Partially deleted in new
chr1	155325242	155326884	chr1:155325242-155326884	0	+	155325242	155325242	8553170	3	430,47,305,	0,621,1337,
#Partially deleted in new
chr1	155325566	155327132	chr1:155325566-155327132	0	+	155325566	155327132	789624	3	106,47,523,	0,297,1043,
#Partially deleted in new
chr1	155335267	155562693	chr1:155335267-155562693	1	-	155337659	155521519	0	28	2484,302,41,167,173,139,91,87,249,133,55,153,158,95,165,109,147,207,109,46,89,95,180,742,102,4564,519,541,	0,2821,4060,6668,8046,8336,8915,11115,12388,14059,14274,17438,19205,22048,22317,25033,35236,35509,43013,43235,44775,60191,80476,103059,124529,142618,185832,226885,
#Partially deleted in new
chr1	155336054	155562532	chr1:155336054-155562532	3	-	155337659	155521519	0	28	1697,302,41,167,173,139,91,87,249,133,55,153,158,95,165,109,147,207,109,46,74,95,180,742,102,4564,519,380,	0,2034,3273,5881,7259,7549,8128,10328,11601,13272,13487,16651,18418,21261,21530,24246,34449,34722,42226,42448,43988,59404,79689,102272,123742,141831,185045,226098,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	155343040	155346429	chr1:155343040-155346429	0	-	155343040	155343040	8553170	4	446,139,91,47,	0,563,1142,3342,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	155343450	155344591	chr1:155343450-155344591	0	-	155343450	155343450	8553170	3	36,139,409,	0,153,732,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	155343655	155349351	chr1:155343655-155349351	0	-	155346105	155349351	789624	6	87,91,245,87,249,25,	0,527,2307,2727,4000,5671,
#Deleted in new
chr1	155346349	155346445	chr1:155346349-155346445	3	-	155346349	155346349	5263520	1	96,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	155358711	155358818	chr1:155358711-155358818	3	-	155358711	155358711	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	155370146	155370868	chr1:155370146-155370868	0	-	155370146	155370146	8553170	2	504,92,	0,630,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	155396009	155396978	chr1:155396009-155396978	3	-	155396009	155396009	8553170	2	393,55,	0,914,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	155419396	155419500	chr1:155419396-155419500	3	+	155419396	155419396	8553170	1	104,	0,
#Deleted in new
chr1	155433177	155434262	chr1:155433177-155434262	7	+	155433177	155433177	16724991	1	1085,	0,
#Deleted in new
chr1	155562041	155563646	chr1:155562041-155563646	3	+	155562041	155562041	8553170	2	245,666,	0,939,
#Deleted in new
chr1	155562072	155563944	chr1:155562072-155563944	0	+	155562072	155562072	789624	2	214,695,	0,1177,
#Deleted in new
chr1	155566049	155566306	chr1:155566049-155566306	7	-	155566049	155566049	16724991	1	257,	0,
#Partially deleted in new
chr1	155586643	155602197	chr1:155586643-155602197	7	+	155586643	155586643	16724991	3	60,93,125,	0,12179,15429,
#Deleted in new
chr1	155590600	155591262	chr1:155590600-155591262	7	-	155590600	155590600	16724991	1	662,	0,
#Partially deleted in new
chr1	155609775	155610380	chr1:155609775-155610380	3	-	155609775	155609775	8553170	2	117,103,	0,502,
#Partially deleted in new
chr1	155610204	155612316	chr1:155610204-155612316	0	+	155610204	155610204	8553170	8	128,136,70,140,55,139,180,135,	0,220,834,1011,1344,1484,1716,1977,
#Partially deleted in new
chr1	155610215	155612478	chr1:155610215-155612478	0	+	155610215	155610215	8553170	8	117,136,70,76,55,164,118,297,	0,209,823,1000,1333,1473,1767,1966,
#Partially deleted in new
chr1	155610217	155614951	chr1:155610217-155614951	0	+	155610248	155611558	789624	13	115,136,70,55,139,118,135,153,132,185,105,110,893,	0,207,821,1331,1471,1765,1964,2200,2626,2831,3244,3439,3841,
#Partially deleted in new
chr1	155610217	155614933	chr1:155610217-155614933	1	+	155610248	155614200	789624	14	115,136,70,76,55,139,118,135,153,132,185,142,110,872,	0,207,821,998,1331,1471,1765,1964,2200,2626,2831,3207,3439,3844,
#Partially deleted in new
chr1	155610218	155610752	chr1:155610218-155610752	0	+	155610218	155610218	8553170	2	114,328,	0,206,
#Partially deleted in new
chr1	155610224	155614967	chr1:155610224-155614967	3	+	155610248	155614273	789624	14	108,136,70,76,55,139,118,135,153,132,185,105,110,909,	0,200,814,991,1324,1464,1758,1957,2193,2619,2824,3237,3432,3834,
#Partially deleted in new
chr1	155610240	155614935	chr1:155610240-155614935	1	+	155610248	155614273	789624	13	92,136,70,26,139,118,135,153,132,185,105,77,877,	0,184,798,975,1448,1742,1941,2177,2603,2808,3221,3416,3818,
#Partially deleted in new
chr1	155610240	155614935	chr1:155610240-155614935	0	+	155610240	155610240	789624	12	320,70,76,88,118,135,153,132,185,142,110,877,	0,798,975,1499,1742,1941,2177,2603,2808,3184,3416,3818,
#Partially deleted in new
chr1	155610242	155611347	chr1:155610242-155611347	0	+	155610242	155610242	8553170	3	90,136,309,	0,182,796,
#Partially deleted in new
chr1	155610243	155611580	chr1:155610243-155611580	0	+	155610243	155610243	8553170	5	89,136,70,76,170,	0,181,795,972,1167,
#Partially deleted in new
chr1	155610253	155612482	chr1:155610253-155612482	0	+	155610253	155610253	8553170	9	79,167,70,76,55,139,118,135,65,	0,140,785,962,1295,1435,1729,1928,2164,
#Partially deleted in new
chr1	155610262	155612342	chr1:155610262-155612342	0	+	155610262	155610262	8553170	7	70,136,70,76,88,180,161,	0,162,776,953,1477,1658,1919,
#Partially deleted in new
chr1	155610311	155612309	chr1:155610311-155612309	0	+	155610311	155610311	8553170	8	21,136,70,76,177,139,118,128,	0,113,727,904,1115,1377,1671,1870,
#Partially deleted in new
chr1	155610383	155612317	chr1:155610383-155612317	0	+	155610383	155610383	8553170	7	177,70,140,55,139,118,136,	0,655,832,1165,1305,1599,1798,
#Partially deleted in new
chr1	155610619	155614931	chr1:155610619-155614931	0	+	155610619	155610619	8553170	13	342,70,76,55,139,118,135,153,132,185,105,110,870,	0,419,596,929,1069,1363,1562,1798,2224,2429,2842,3037,3442,
#Partially deleted in new
chr1	155610684	155611916	chr1:155610684-155611916	0	+	155610684	155610684	8553170	3	424,388,228,	0,531,1004,
#Partially deleted in new
chr1	155612465	155614204	chr1:155612465-155614204	0	+	155612465	155612465	8553170	6	105,170,185,105,110,146,	0,340,583,996,1191,1593,
#Partially deleted in new
chr1	155612595	155614138	chr1:155612595-155614138	0	+	155612595	155612595	8553170	5	380,185,105,110,80,	0,453,866,1061,1463,
#Partially deleted in new
chr1	155613220	155614052	chr1:155613220-155614052	0	+	155613220	155613774	789624	3	13,105,396,	0,241,436,
#Partially deleted in new
chr1	155614725	155660245	chr1:155614725-155660245	7	-	155614725	155614725	16724991	9	142,103,637,40,145,145,262,454,577,	0,846,1041,2652,4158,31767,33675,35091,44943,
#Partially deleted in new
chr1	155659442	155688656	chr1:155659442-155688656	1	-	155659656	155688464	789624	10	1471,117,151,145,172,87,199,104,41,586,	0,1864,9184,10877,13117,15567,17105,19966,20973,28628,
#Partially deleted in new
chr1	155659445	155689000	chr1:155659445-155689000	3	-	155659656	155688976	789624	11	1468,117,91,145,172,87,199,104,41,131,71,	0,1861,9181,10874,13114,15564,17102,19963,20970,28625,29484,
#Partially deleted in new
chr1	155659445	155688294	chr1:155659445-155688294	1	-	155659656	155679500	789624	10	1468,117,91,145,172,87,199,104,75,224,	0,1861,9181,10874,13114,15564,17102,19963,20936,28625,
#Partially deleted in new
chr1	155659445	155688698	chr1:155659445-155688698	1	-	155659656	155680436	789624	10	1468,117,151,145,172,87,199,104,41,40,	0,1861,9181,10874,13114,15564,17102,19963,20970,29213,
#Partially deleted in new
chr1	155659445	155688686	chr1:155659445-155688686	0	-	155668769	155680436	789624	10	1468,117,151,172,87,199,104,41,131,28,	0,1861,9181,13114,15564,17102,19963,20970,28625,29213,
#Partially deleted in new
chr1	155659445	155688706	chr1:155659445-155688706	1	-	155659656	155680436	789624	11	1468,117,151,145,172,87,199,104,41,131,48,	0,1861,9181,10874,13114,15564,17102,19963,20970,28625,29213,
#Partially deleted in new
chr1	155659445	155688774	chr1:155659445-155688774	1	-	155659656	155679500	789624	10	1468,117,151,145,172,87,199,104,131,116,	0,1861,9181,10874,13114,15564,17102,19963,28625,29213,
#Partially deleted in new
chr1	155659445	155688748	chr1:155659445-155688748	0	-	155672640	155680436	789624	11	1468,117,151,145,168,87,199,104,41,131,90,	0,1861,9181,10874,13114,15564,17102,19963,20970,28625,29213,
#Partially deleted in new
chr1	155659445	155689000	chr1:155659445-155689000	1	-	155659656	155680436	789624	10	1468,117,151,145,172,87,199,104,41,71,	0,1861,9181,10874,13114,15564,17102,19963,20970,29484,
#Partially deleted in new
chr1	155659445	155688573	chr1:155659445-155688573	1	-	155659656	155688464	789624	10	1468,117,91,145,172,87,199,104,41,503,	0,1861,9181,10874,13114,15564,17102,19963,20970,28625,
#Partially deleted in new
chr1	155659445	155688757	chr1:155659445-155688757	1	-	155659656	155680436	789624	11	1468,117,91,145,172,87,199,104,41,131,99,	0,1861,9181,10874,13114,15564,17102,19963,20970,28625,29213,
#Partially deleted in new
chr1	155659445	155688774	chr1:155659445-155688774	1	-	155659656	155679500	789624	11	1468,117,91,145,172,87,199,104,75,131,116,	0,1861,9181,10874,13114,15564,17102,19963,20936,28625,29213,
#Partially deleted in new
chr1	155659445	155688973	chr1:155659445-155688973	0	-	155679291	155680436	789624	11	1468,117,151,145,172,87,199,156,104,41,44,	0,1861,9181,10874,13114,15564,17102,19712,19963,20970,29484,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	155659445	155671091	chr1:155659445-155671091	0	-	155659445	155659445	8553170	4	1468,117,151,772,	0,1861,9181,10874,
#Partially deleted in new
chr1	155660716	155688475	chr1:155660716-155688475	1	-	155661228	155688464	789624	9	707,151,145,172,87,199,104,41,405,	0,7910,9603,11843,14293,15831,18692,19699,27354,
#Partially deleted in new
chr1	155660739	155675074	chr1:155660739-155675074	0	-	155660739	155660739	8553170	6	174,117,151,145,211,65,	0,567,7887,9580,11781,14270,
#Partially deleted in new
chr1	155660830	155680427	chr1:155660830-155680427	0	-	155660830	155660830	8553170	8	83,117,145,211,87,199,104,12,	0,476,9489,11690,14179,15717,18578,19585,
#Partially deleted in new
chr1	155660839	155675051	chr1:155660839-155675051	0	-	155660839	155660839	8553170	6	74,117,91,145,211,42,	0,467,7787,9480,11681,14170,
#Partially deleted in new
chr1	155670323	155688975	chr1:155670323-155688975	0	-	155670323	155670323	8553170	6	141,460,87,199,104,46,	0,1948,4686,6224,9085,18606,
#Partially deleted in new
chr1	155672361	155680456	chr1:155672361-155680456	0	-	155672361	155672361	8553170	4	370,199,104,41,	0,4186,7047,8054,
#Partially deleted in new
chr1	155672559	155688654	chr1:155672559-155688654	0	-	155672559	155680436	789624	7	172,87,199,104,41,131,76,	0,2450,3988,6849,7856,15511,16019,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	155672559	155688717	chr1:155672559-155688717	0	-	155672559	155672559	8553170	8	172,134,87,199,104,41,131,59,	0,2125,2450,3988,6849,7856,15511,16099,
#Partially deleted in new
chr1	155672725	155679464	chr1:155672725-155679464	0	-	155672725	155672725	8553170	4	32,87,199,56,	0,2284,3822,6683,
#Deleted in new
chr1	155687959	155689337	chr1:155687959-155689337	0	+	155687959	155687959	8553170	2	233,499,	0,879,
#Partially deleted in new
chr1	155687966	155738526	chr1:155687966-155738526	1	+	155709779	155738242	0	13	226,80,52,102,109,93,131,81,159,60,90,118,370,	0,1128,21806,33550,37415,37960,39641,41075,41241,43389,43977,48979,50190,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	155687984	155731411	chr1:155687984-155731411	0	+	155709779	155731411	789624	12	208,80,93,52,123,102,109,93,131,81,159,56,	0,1110,21048,21788,29021,33532,37397,37942,39623,41057,41223,43371,
#Deleted in new
chr1	155687990	155689627	chr1:155687990-155689627	0	+	155687990	155687990	8553170	2	202,533,	0,1104,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	155689057	155739010	chr1:155689057-155739010	3	+	155709779	155738242	0	13	117,52,123,102,109,93,131,81,159,60,90,118,854,	0,20715,27948,32459,36324,36869,38550,39984,40150,42298,42886,47888,49099,
#Partially deleted in new
chr1	155689082	155738526	chr1:155689082-155738526	1	+	155709779	155738242	0	13	161,52,123,102,109,93,131,81,159,60,90,118,370,	0,20690,27923,32434,36299,36844,38525,39959,40125,42273,42861,47863,49074,
#Partially deleted in new
chr1	155689090	155738526	chr1:155689090-155738526	1	+	155709779	155738242	0	12	84,52,123,109,93,131,81,159,60,90,118,370,	0,20682,27915,36291,36836,38517,39951,40117,42265,42853,47855,49066,
#Partially deleted in new
chr1	155689090	155727038	chr1:155689090-155727038	0	+	155689090	155689090	8553170	6	153,52,123,102,109,203,	0,20682,27915,32426,36291,37745,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	155689090	155738971	chr1:155689090-155738971	1	+	155709779	155738242	0	12	84,52,102,109,93,131,81,159,60,90,118,815,	0,20682,32426,36291,36836,38517,39951,40117,42265,42853,47855,49066,
#Partially deleted in new
chr1	155689093	155721989	chr1:155689093-155721989	1	+	155709779	155721690	789624	4	81,52,123,473,	0,20679,27912,32423,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	155689098	155726294	chr1:155689098-155726294	0	+	155689098	155689098	8553170	7	76,52,123,102,109,93,161,	0,20674,27907,32418,36283,36828,37035,
#Partially deleted in new
chr1	155689101	155729064	chr1:155689101-155729064	0	+	155709779	155729064	789624	7	73,52,102,30,28,131,23,	0,20671,32415,36280,36890,38506,39940,
#Partially deleted in new
chr1	155709772	155729291	chr1:155709772-155729291	0	+	155709779	155729291	789624	7	52,123,102,30,28,131,84,	0,7233,11744,15609,16219,17835,19435,
#Partially deleted in new
chr1	155709772	155732014	chr1:155709772-155732014	0	+	155709779	155732014	789624	9	52,123,102,28,131,81,159,60,71,	0,7233,11744,16219,17835,19269,19435,21583,22171,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	155709776	155726120	chr1:155709776-155726120	0	+	155709776	155709776	8553170	5	48,123,102,109,194,	0,7229,11740,15605,16150,
#Partially deleted in new
chr1	155709800	155721876	chr1:155709800-155721876	0	+	155709800	155721690	789624	2	24,360,	0,11716,
#Partially deleted in new
chr1	155710097	155710563	chr1:155710097-155710563	3	-	155710097	155710097	8553170	2	131,26,	0,440,
#Partially deleted in new
chr1	155721535	155732033	chr1:155721535-155732033	0	+	155721535	155732033	789624	7	83,109,93,131,159,60,90,	0,3846,4391,6072,7672,9820,10408,
#Partially deleted in new
chr1	155727500	155729261	chr1:155727500-155729261	0	+	155727500	155727500	8553170	3	238,81,54,	0,1541,1707,
#Partially deleted in new
chr1	155727607	155732201	chr1:155727607-155732201	0	+	155727607	155727607	8553170	5	131,81,159,60,258,	0,1434,1600,3748,4336,
#Partially deleted in new
chr1	155729207	155738529	chr1:155729207-155738529	0	+	155729207	155738195	789624	4	159,60,90,373,	0,2148,2736,8949,
#Partially deleted in new
chr1	155729207	155738529	chr1:155729207-155738529	0	+	155729207	155738242	789624	4	159,60,118,373,	0,2148,7738,8949,
#Partially deleted in new
chr1	155729296	155731530	chr1:155729296-155731530	0	+	155729296	155729296	8553170	2	70,175,	0,2059,
#Partially deleted in new
chr1	155729340	155738529	chr1:155729340-155738529	0	+	155729340	155738242	789624	5	26,60,90,58,373,	0,2015,2603,7665,8816,
#Deleted in new
chr1	155736757	155738529	chr1:155736757-155738529	0	+	155736757	155736757	8553170	2	306,373,	0,1399,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	155737011	155739010	chr1:155737011-155739010	0	+	155737011	155738242	789624	3	52,102,402,	0,1145,1597,
#Partially deleted in new
chr1	155745828	155750137	chr1:155745828-155750137	7	+	155745828	155745828	16724991	14	84,136,70,76,55,139,118,135,151,132,183,105,110,215,	0,176,790,967,1300,1440,1734,1933,2148,2571,2777,3498,3693,4094,
#Partially deleted in new
chr1	155749661	155857295	chr1:155749661-155857295	1	-	155750583	155853780	789624	32	1072,103,631,211,114,120,144,144,198,185,253,1710,117,151,145,172,87,199,104,41,102,193,171,120,96,51,51,75,191,192,531,149,	0,2105,2298,3542,4713,7296,7518,8229,10782,12528,13650,15338,17763,21405,23404,25340,26733,27960,34324,35672,45388,55287,63972,64668,66143,66550,70944,71812,72624,77175,103614,107485,
#Partially deleted in new
chr1	155749661	155859400	chr1:155749661-155859400	1	-	155750583	155853780	789624	32	1072,103,631,211,114,120,144,144,198,185,253,1710,117,151,145,172,87,199,104,41,102,193,171,120,96,51,51,75,191,192,531,97,	0,2105,2298,3542,4713,7296,7518,8229,10782,12528,13650,15338,17763,21405,23404,25340,26733,27960,34324,35672,45388,55287,63972,64668,66143,66550,70944,71812,72624,77175,103614,109642,
#Partially deleted in new
chr1	155749716	155859400	chr1:155749716-155859400	3	-	155750583	155853780	789624	32	1017,103,628,211,114,120,144,144,198,185,253,1710,117,151,145,172,87,199,104,41,102,193,171,120,96,51,51,75,191,192,531,97,	0,2050,2243,3487,4658,7241,7463,8174,10727,12473,13595,15283,17708,21350,23349,25285,26678,27905,34269,35617,45333,55232,63917,64613,66088,66495,70889,71757,72569,77120,103559,109587,
#Partially deleted in new
chr1	155749941	155752202	chr1:155749941-155752202	0	-	155749941	155749941	8553170	2	792,436,	0,1825,
#Partially deleted in new
chr1	155750331	155857295	chr1:155750331-155857295	1	-	155750583	155853780	789624	32	402,103,628,211,114,120,144,144,198,185,253,1710,117,151,145,172,87,199,104,41,102,193,171,120,96,51,51,75,191,192,531,137,	0,1435,1628,2872,4043,6626,6848,7559,10112,11858,12980,14668,17093,20735,22734,24670,26063,27290,33654,35002,44718,54617,63302,63998,65473,65880,70274,71142,71954,76505,102944,106827,
#Partially deleted in new
chr1	155750331	155857295	chr1:155750331-155857295	1	-	155765253	155853780	789624	31	402,103,628,119,144,144,198,185,253,351,53,117,151,145,172,87,199,104,41,102,193,171,120,96,51,51,75,191,192,531,137,	0,1435,1628,6627,6848,7559,10112,11858,12980,14668,16325,17093,20735,22734,24670,26063,27290,33654,35002,44718,54617,63302,63998,65473,65880,70274,71142,71954,76505,102944,106827,
#Partially deleted in new
chr1	155754016	155757967	chr1:155754016-155757967	0	-	155754016	155754016	8553170	4	472,120,144,77,	0,2941,3163,3874,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	155756540	155757940	chr1:155756540-155757940	0	-	155756540	155756540	8553170	2	783,50,	0,1350,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr1	155764426	155857204	chr1:155764426-155857204	1	-	155764882	155853780	789624	21	2283,117,151,145,172,87,199,104,41,102,193,171,120,96,51,51,75,191,192,531,46,	0,2998,6640,8639,10575,11968,13195,19559,20907,30623,40522,49207,49903,51378,51785,56179,57047,57859,62410,88849,92732,
#Partially deleted in new
chr1	155764783	155857217	chr1:155764783-155857217	0	-	155764783	155764783	8553170	20	1926,117,151,145,172,87,199,104,41,102,193,171,120,458,51,75,191,192,531,71,	0,2641,6283,8282,10218,11611,12838,19202,20550,30266,40165,48850,49546,51021,55822,56690,57502,62053,88492,92363,
#Partially deleted in new
chr1	155764843	155857295	chr1:155764843-155857295	1	-	155764843	155853780	789624	22	39,1824,117,151,145,172,87,199,104,41,102,193,171,120,96,51,51,75,191,192,531,149,	0,42,2581,6223,8222,10158,11551,12778,19142,20490,30206,40105,48790,49486,50961,51368,55762,56630,57442,61993,88432,92303,
#Partially deleted in new
chr1	155765448	155773420	chr1:155765448-155773420	0	-	155765448	155765448	8553170	4	1261,117,151,355,	0,1976,5618,7617,
#Partially deleted in new
chr1	155766535	155776461	chr1:155766535-155776461	0	-	155766535	155766535	8553170	6	174,117,151,145,211,67,	0,889,4531,6530,8427,9859,
#Partially deleted in new
chr1	155767085	155771201	chr1:155767085-155771201	0	-	155767085	155767085	8553170	2	456,135,	0,3981,
#Partially deleted in new
chr1	155774806	155805024	chr1:155774806-155805024	0	-	155774806	155774806	8553170	6	367,199,104,41,102,76,	0,2815,9179,10527,20243,30142,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	155776394	155784389	chr1:155776394-155784389	0	-	155776394	155776394	8553170	3	87,199,404,	0,1227,7591,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	155784374	155821520	chr1:155784374-155821520	0	-	155784374	155784374	8553170	9	1000,102,193,171,120,96,51,51,47,	0,10675,20574,29259,29955,31430,31837,36231,37099,
#Partially deleted in new
chr1	155822446	155853405	chr1:155822446-155853405	0	-	155822446	155822446	8553170	4	30,192,119,130,	0,4390,10385,30829,
#Partially deleted in new
chr1	155826869	155853809	chr1:155826869-155853809	0	-	155826869	155826869	8553170	3	159,86,534,	0,4665,26406,
#Partially deleted in new
chr1	155845366	155846624	chr1:155845366-155846624	7	+	155845366	155845366	16724991	2	868,73,	0,1185,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	155859508	155885199	chr1:155859508-155885199	3	+	155859761	155881508	789624	4	287,827,124,4002,	0,8456,20991,21689,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	155897807	155911404	chr1:155897807-155911404	3	-	155900387	155910761	0	6	2811,192,74,57,149,162,	0,6503,6923,12642,12848,13435,
#Partially deleted in new
chr1	155900182	155911402	chr1:155900182-155911402	1	-	155900387	155910504	0	5	436,192,74,57,160,	0,4128,4548,10267,11060,
#Partially deleted in new
chr1	155900273	155910915	chr1:155900273-155910915	1	-	155900387	155910885	0	6	345,192,74,57,149,38,	0,4037,4457,10176,10382,10604,
#Partially deleted in new
chr1	155900397	155911344	chr1:155900397-155911344	0	-	155904468	155910761	789624	7	221,192,8,74,57,149,102,	0,3913,4205,4333,10052,10258,10845,
#Partially deleted in new
chr1	155900593	155910881	chr1:155900593-155910881	0	-	155900593	155910761	789624	5	25,192,74,57,226,	0,3717,4137,9856,10062,
#Deleted in new
chr1	155910094	155910791	chr1:155910094-155910791	0	-	155910094	155910094	8553170	2	412,136,	0,561,
#Partially deleted in new
chr1	155913042	155934397	chr1:155913042-155934397	3	-	155914120	155934373	0	14	1278,92,113,174,254,58,61,212,164,53,80,129,217,62,	0,2830,3582,4456,8332,8818,10584,12589,13633,14061,16253,16669,20590,21293,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	155913044	155934399	chr1:155913044-155934399	1	-	155915822	155934373	0	13	2920,113,174,254,58,61,212,164,53,80,129,217,64,	0,3580,4454,8330,8816,10582,12587,13631,14059,16251,16667,20588,21291,
#Partially deleted in new
chr1	155914111	155925763	chr1:155914111-155925763	0	-	155914111	155914111	8553170	8	209,92,85,174,254,58,61,132,	0,1761,2513,3387,7263,7749,9515,11520,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	155915576	155917574	chr1:155915576-155917574	0	-	155915576	155915576	8553170	3	388,85,76,	0,1048,1922,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	155915663	155916942	chr1:155915663-155916942	0	-	155915663	155915663	8553170	2	301,318,	0,961,
#Deleted in new
chr1	155919908	155920045	chr1:155919908-155920045	3	-	155919908	155919908	5263520	1	137,	0,
#Deleted in new
chr1	155921238	155922014	chr1:155921238-155922014	0	-	155921238	155921238	8553170	2	289,154,	0,622,
#Partially deleted in new
chr1	155921384	155934373	chr1:155921384-155934373	1	-	155921384	155934373	0	10	143,58,61,212,164,53,80,129,217,38,	0,476,2242,4247,5291,5719,7911,8327,12248,12951,
#Partially deleted in new
chr1	155921421	155934390	chr1:155921421-155934390	0	-	155921421	155921421	8553170	10	106,58,61,212,164,53,80,129,217,55,	0,439,2205,4210,5254,5682,7874,8290,12211,12914,
#Partially deleted in new
chr1	155925957	155926086	chr1:155925957-155926086	3	-	155925957	155925957	789624	1	129,	0,
#Partially deleted in new
chr1	155925957	155926085	chr1:155925957-155926085	3	-	155925957	155925957	8553170	1	128,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	155926470	155934398	chr1:155926470-155934398	0	-	155926470	155926470	8553170	6	369,53,80,129,217,63,	0,633,2825,3241,7162,7865,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	155932272	155934400	chr1:155932272-155934400	0	-	155932272	155932272	8553170	3	442,266,65,	0,1311,2063,
#Deleted in new
chr1	155941709	155942949	chr1:155941709-155942949	3	+	155941709	155942834	789624	1	1240,	0,
#Partially deleted in new
chr1	155946850	155978160	chr1:155946850-155978160	3	-	155947941	155969282	0	22	1165,184,444,51,36,68,120,201,68,170,77,249,118,126,251,141,110,130,64,68,145,94,	0,3448,3978,4632,4890,5068,5265,5777,8051,10862,11469,14810,15254,15742,16082,18137,18452,18780,19565,19969,22305,31216,
#Partially deleted in new
chr1	155946853	155978527	chr1:155946853-155978527	1	-	155947941	155978427	0	22	1162,184,444,51,36,68,120,201,68,170,77,249,118,126,251,144,110,130,64,68,145,163,	0,3445,3975,4629,4887,5065,5262,5774,8048,10859,11466,14807,15251,15739,16079,18134,18449,18777,19562,19966,22302,31511,
#Partially deleted in new
chr1	155946854	155990073	chr1:155946854-155990073	1	-	155947941	155985395	789624	26	1161,184,444,51,36,68,120,201,68,170,77,249,118,126,251,144,110,130,64,68,145,94,40,118,118,83,	0,3444,3974,4628,4886,5064,5261,5773,8047,10858,11465,14806,15250,15738,16078,18133,18448,18776,19561,19965,22301,36252,37539,38477,42379,43136,
#Partially deleted in new
chr1	155946854	156002564	chr1:155946854-156002564	0	-	155946854	155946854	8553170	3	226,533,124,	0,49240,55586,
#Partially deleted in new
chr1	155946855	155951748	chr1:155946855-155951748	0	-	155947941	155951748	789624	5	1160,214,444,51,8,	0,3413,3973,4627,4885,
#Partially deleted in new
chr1	155947366	155952721	chr1:155947366-155952721	1	-	155950845	155952721	789624	9	649,184,44,399,51,36,68,120,94,	0,2932,3462,3507,4116,4374,4552,4749,5261,
#Partially deleted in new
chr1	155947941	155978427	chr1:155947941-155978427	1	-	155947941	155978427	0	22	74,184,444,51,36,68,120,201,68,170,77,249,118,126,251,141,110,130,64,68,145,63,	0,2357,2887,3541,3799,3977,4174,4686,6960,9771,10378,13719,14163,14651,14991,17046,17361,17689,18474,18878,21214,30423,
#Deleted in new
chr1	155951272	155951336	chr1:155951272-155951336	3	-	155951272	155951272	5263520	1	64,	0,
#Partially deleted in new
chr1	155952731	155962623	chr1:155952731-155962623	0	-	155952731	155952731	8553170	6	97,170,77,249,118,31,	0,4981,5588,8929,9373,9861,
#Partially deleted in new
chr1	155952802	155961957	chr1:155952802-155961957	0	-	155952802	155952802	8553170	5	26,68,170,77,297,	0,2099,4910,5517,8858,
#Deleted in new
chr1	155961938	155962972	chr1:155961938-155962972	0	-	155961938	155961938	8553170	2	780,40,	0,994,
#Partially deleted in new
chr1	155963126	155966479	chr1:155963126-155966479	0	-	155965122	155966479	789624	4	57,141,110,64,	0,1861,2176,3289,
#Partially deleted in new
chr1	155963139	155979099	chr1:155963139-155979099	0	-	155963139	155969282	789624	8	44,144,110,130,64,68,145,187,	0,1848,2163,2491,3276,3680,6016,15773,
#Partially deleted in new
chr1	155964987	155978501	chr1:155964987-155978501	0	-	155964987	155964987	8553170	6	144,110,64,68,145,137,	0,315,1428,1832,4168,13377,
#Partially deleted in new
chr1	155964987	155978169	chr1:155964987-155978169	0	-	155964987	155969282	789624	7	144,110,130,64,68,145,103,	0,315,643,1428,1832,4168,13079,
#Partially deleted in new
chr1	155965323	155969729	chr1:155965323-155969729	0	-	155965323	155969572	789624	6	89,130,64,68,145,196,	0,307,1092,1496,3832,4210,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	155968219	155971063	chr1:155968219-155971063	0	-	155968219	155968219	8553170	2	1081,1095,	0,1749,
#Partially deleted in new
chr1	155968808	155979113	chr1:155968808-155979113	0	-	155968808	155968808	8553170	2	492,201,	0,10104,
#Partially deleted in new
chr1	155969247	155989499	chr1:155969247-155989499	0	-	155969247	155985395	789624	5	53,94,40,118,266,	0,13859,15146,16084,19986,
#Deleted in new
chr1	155978798	155982986	chr1:155978798-155982986	3	+	155978798	155978798	8553170	2	37,2120,	0,2068,
#Partially deleted in new
chr1	155985374	156007070	chr1:155985374-156007070	0	-	155985374	155985395	789624	4	75,118,87,140,	0,3859,18268,21556,
#Partially deleted in new
chr1	155989233	155991212	chr1:155989233-155991212	0	-	155989233	155989233	8553170	2	118,372,	0,1607,
#Partially deleted in new
chr1	155991389	156001787	chr1:155991389-156001787	3	+	155991389	155991389	8553170	2	121,280,	0,10118,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	156001952	156032907	chr1:156001952-156032907	3	+	156001952	156001952	8553170	4	1061,239,172,81,	0,16202,23480,30874,
#Partially deleted in new
chr1	156009047	156020959	chr1:156009047-156020959	3	-	156009539	156020167	789624	6	603,78,109,99,155,72,	0,2762,5913,9222,10965,11840,
#Partially deleted in new
chr1	156009048	156013040	chr1:156009048-156013040	0	-	156009048	156009048	8553170	2	602,1231,	0,2761,
#Partially deleted in new
chr1	156009061	156020171	chr1:156009061-156020171	0	-	156009061	156009061	8553170	5	589,756,109,99,159,	0,2748,5899,9208,10951,
#Partially deleted in new
chr1	156009085	156020917	chr1:156009085-156020917	1	-	156009622	156020167	789624	4	565,99,155,30,	0,9184,10927,11802,
#Partially deleted in new
chr1	156009104	156020933	chr1:156009104-156020933	1	-	156009622	156020167	789624	4	546,78,155,46,	0,2705,10908,11783,
#Partially deleted in new
chr1	156009106	156020912	chr1:156009106-156020912	0	-	156009106	156009106	8553170	6	544,78,109,237,155,25,	0,2703,5854,9025,10906,11781,
#Partially deleted in new
chr1	156009114	156020914	chr1:156009114-156020914	0	-	156009114	156009114	8553170	6	536,78,113,99,155,27,	0,2695,5846,9155,10898,11773,
#Partially deleted in new
chr1	156009128	156020935	chr1:156009128-156020935	0	-	156009128	156009128	8553170	5	522,78,237,155,48,	0,2681,9003,10884,11759,
#Partially deleted in new
chr1	156009334	156020946	chr1:156009334-156020946	0	-	156019232	156020167	789624	6	316,78,237,182,155,59,	0,2475,8797,9750,10678,11553,
#Partially deleted in new
chr1	156009359	156020889	chr1:156009359-156020889	1	-	156009539	156020167	789624	6	291,78,109,99,155,163,	0,2450,5601,8910,10653,11367,
#Partially deleted in new
chr1	156009549	156020912	chr1:156009549-156020912	0	-	156011886	156020167	789624	5	101,78,117,155,25,	0,2260,8702,10463,11338,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	156010220	156020950	chr1:156010220-156020950	0	-	156010220	156010220	8553170	4	4849,99,155,63,	0,8049,9792,10667,
#Partially deleted in new
chr1	156011580	156020928	chr1:156011580-156020928	0	-	156011580	156011580	8553170	5	307,109,99,155,41,	0,3380,6689,8432,9307,
#Partially deleted in new
chr1	156011809	156020931	chr1:156011809-156020931	0	-	156012526	156020167	789624	6	78,181,109,99,155,44,	0,575,3151,6460,8203,9078,
#Partially deleted in new
chr1	156011809	156020914	chr1:156011809-156020914	0	-	156012526	156020167	789624	6	78,171,109,99,155,27,	0,585,3151,6460,8203,9078,
#Partially deleted in new
chr1	156011809	156020789	chr1:156011809-156020789	0	-	156011809	156020167	789624	5	78,109,99,155,114,	0,3151,6460,8203,8866,
#Partially deleted in new
chr1	156018269	156020903	chr1:156018269-156020903	0	-	156018269	156020896	789624	4	99,155,81,16,	0,1743,1996,2618,
#Partially deleted in new
chr1	156020012	156020845	chr1:156020012-156020845	0	-	156020012	156020012	8553170	2	155,422,	0,411,
#Partially deleted in new
chr1	156035300	156053794	chr1:156035300-156053794	3	-	156036977	156053701	789624	11	1830,187,116,84,140,226,159,263,218,152,201,	0,6184,6571,6852,7473,8697,13200,14990,15809,16405,18293,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	156041871	156042538	chr1:156041871-156042538	0	-	156041871	156041871	8553170	2	116,386,	0,281,
#Partially deleted in new
chr1	156048501	156053650	chr1:156048501-156053650	0	-	156048501	156048501	8553170	5	158,69,218,152,57,	0,1789,2608,3204,5092,
#Partially deleted in new
chr1	156054751	156058510	chr1:156054751-156058510	3	+	156054889	156058371	0	4	206,163,90,196,	0,511,3226,3563,
#Partially deleted in new
chr1	156054791	156058506	chr1:156054791-156058506	1	+	156054889	156058371	0	3	166,163,192,	0,471,3523,
#Partially deleted in new
chr1	156054820	156055993	chr1:156054820-156055993	0	+	156054820	156054820	8553170	2	137,731,	0,442,
#Partially deleted in new
chr1	156054849	156058503	chr1:156054849-156058503	1	+	156054889	156058409	0	4	108,163,90,226,	0,413,3128,3428,
#Partially deleted in new
chr1	156055084	156058506	chr1:156055084-156058506	0	+	156055084	156055084	8553170	3	341,90,192,	0,2893,3230,
#Partially deleted in new
chr1	156055495	156058506	chr1:156055495-156058506	0	+	156055495	156055495	8553170	3	180,90,192,	0,2482,2819,
#Partially deleted in new
chr1	156061159	156070514	chr1:156061159-156070514	3	+	156061400	156070287	0	5	284,196,194,81,355,	0,4751,7110,8511,9000,
#Partially deleted in new
chr1	156061188	156066282	chr1:156061188-156066282	0	+	156061188	156061188	8553170	2	255,372,	0,4722,
#Partially deleted in new
chr1	156061205	156070106	chr1:156061205-156070106	0	+	156061205	156061205	8553170	3	238,194,436,	0,7064,8465,
#Partially deleted in new
chr1	156061382	156070504	chr1:156061382-156070504	0	+	156061382	156061382	789624	4	61,194,81,345,	0,6887,8288,8777,
#Partially deleted in new
chr1	156068211	156070365	chr1:156068211-156070365	0	+	156068211	156068211	8553170	3	252,81,206,	0,1459,1948,
#Partially deleted in new
chr1	156072012	156081998	chr1:156072012-156081998	3	-	156076573	156081998	789624	2	5670,454,	0,9532,
#Partially deleted in new
chr1	156077065	156081704	chr1:156077065-156081704	0	-	156077065	156077065	8553170	3	289,215,160,	0,402,4479,
#Partially deleted in new
chr1	156082572	156134487	chr1:156082572-156134487	0	+	156082572	156082572	8553170	4	91,237,157,85,	0,375,48044,51830,
#Partially deleted in new
chr1	156082577	156137865	chr1:156082577-156137865	1	+	156114918	156137764	0	13	86,237,112,562,157,126,171,126,221,223,108,120,212,	0,370,7893,32135,48039,51825,52227,52609,53323,53636,54343,54535,55076,
#Partially deleted in new
chr1	156082630	156093811	chr1:156082630-156093811	0	+	156082630	156082630	8553170	4	33,237,99,103,	0,317,8368,11078,
#Partially deleted in new
chr1	156106657	156114838	chr1:156106657-156114838	0	+	156106657	156106657	8553170	3	166,234,169,	0,2855,8012,
#Partially deleted in new
chr1	156114669	156140089	chr1:156114669-156140089	1	+	156114918	156139106	0	11	605,157,126,171,126,221,223,108,120,270,1010,	0,15947,19733,20135,20517,21231,21544,22251,22443,23818,24410,
#Partially deleted in new
chr1	156114669	156137764	chr1:156114669-156137764	1	+	156114918	156137764	789624	9	605,157,126,171,126,221,154,42,111,	0,15947,19733,20135,20517,21231,21544,22521,22984,
#Partially deleted in new
chr1	156114706	156140089	chr1:156114706-156140089	3	+	156114918	156139106	0	12	568,157,126,171,126,221,223,108,120,90,270,1010,	0,15910,19696,20098,20480,21194,21507,22214,22406,22947,23781,24373,
#Partially deleted in new
chr1	156114710	156134498	chr1:156114710-156134498	0	+	156114710	156114710	8553170	3	356,99,96,	0,15964,19692,
#Deleted in new
chr1	156114710	156115047	chr1:156114710-156115047	0	+	156114710	156114710	8553170	2	201,84,	0,253,
#Partially deleted in new
chr1	156114712	156134446	chr1:156114712-156134446	0	+	156114712	156114712	8553170	4	79,311,157,44,	0,251,15904,19690,
#Partially deleted in new
chr1	156114721	156139317	chr1:156114721-156139317	1	+	156114918	156139106	0	12	553,157,126,171,126,221,223,108,120,90,120,238,	0,15895,19681,20083,20465,21179,21492,22199,22391,22932,23766,24358,
#Partially deleted in new
chr1	156123141	156134528	chr1:156123141-156134528	0	+	156123141	156123141	8553170	3	254,157,126,	0,7475,11261,
#Partially deleted in new
chr1	156126159	156140013	chr1:156126159-156140013	1	+	156126203	156139839	0	13	64,157,126,171,126,221,223,108,120,90,270,23,244,	0,4457,8243,8645,9027,9741,10054,10761,10953,11494,12328,12920,13610,
#Partially deleted in new
chr1	156126173	156135225	chr1:156126173-156135225	0	+	156126802	156126919	789624	6	50,214,157,126,171,39,	0,562,4443,8229,8631,9013,
#Partially deleted in new
chr1	156126188	156137865	chr1:156126188-156137865	1	+	156126802	156137764	789624	11	35,180,157,126,171,126,221,223,108,120,212,	0,547,4428,8214,8616,8998,9712,10025,10732,10924,11465,
#Partially deleted in new
chr1	156126544	156134960	chr1:156126544-156134960	0	+	156126544	156134960	789624	4	107,157,126,156,	0,4072,7858,8260,
#Partially deleted in new
chr1	156126554	156139303	chr1:156126554-156139303	1	+	156129849	156139106	0	13	97,82,157,126,171,126,221,223,108,120,90,270,224,	0,3272,4062,7848,8250,8632,9346,9659,10366,10558,11099,11933,12525,
#Deleted in new
chr1	156134804	156135408	chr1:156134804-156135408	0	+	156134804	156134804	8553170	2	171,222,	0,382,
#Partially deleted in new
chr1	156134820	156139303	chr1:156134820-156139303	0	+	156134820	156134820	8553170	7	155,126,261,223,312,1104,224,	0,366,1040,1393,2100,2833,4259,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	156135112	156137267	chr1:156135112-156137267	0	+	156135112	156135112	8553170	3	200,221,1054,	0,788,1101,
#Partially deleted in new
chr1	156135732	156138161	chr1:156135732-156138161	0	+	156135732	156135732	8553170	5	389,223,108,120,508,	0,481,1188,1380,1921,
#Partially deleted in new
chr1	156136086	156139171	chr1:156136086-156139171	0	+	156136086	156139106	789624	6	35,223,108,120,270,92,	0,127,834,1026,2401,2993,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	156136292	156137292	chr1:156136292-156137292	0	+	156136292	156136292	8553170	2	736,180,	0,820,
#Deleted in new
chr1	156137461	156139103	chr1:156137461-156139103	0	+	156137461	156137461	8553170	3	282,270,24,	0,1026,1618,
#Partially deleted in new
chr1	156147365	156161498	chr1:156147365-156161498	0	+	156154578	156161498	789624	9	65,168,161,63,99,106,117,125,153,	0,7184,9048,10704,11022,11353,13077,13539,13980,
#Partially deleted in new
chr1	156147374	156156574	chr1:156147374-156156574	0	+	156154578	156156574	789624	4	56,146,168,161,	0,5956,7175,9039,
#Partially deleted in new
chr1	156149722	156161493	chr1:156149722-156161493	0	+	156156571	156161493	789624	8	156,161,63,99,106,117,125,148,	0,6691,8347,8665,8996,10720,11182,11623,
#Partially deleted in new
chr1	156150018	156177744	chr1:156150018-156177744	3	+	156154578	156176997	789624	15	75,168,161,63,99,106,117,125,173,151,181,119,158,101,1340,	0,4531,6395,8051,8369,8700,10424,10886,11327,12925,22807,24803,25067,25537,26386,
#Partially deleted in new
chr1	156150202	156156574	chr1:156150202-156156574	0	+	156150202	156150202	8553170	3	61,436,161,	0,4347,6211,
#Partially deleted in new
chr1	156153526	156177744	chr1:156153526-156177744	1	+	156154578	156176997	789624	15	238,168,161,63,99,106,117,125,173,151,181,119,158,101,1340,	0,1023,2887,4543,4861,5192,6916,7378,7819,9417,19299,21295,21559,22029,22878,
#Partially deleted in new
chr1	156153577	156177743	chr1:156153577-156177743	1	+	156156571	156176997	789624	13	187,161,63,106,117,125,173,151,181,119,158,101,1339,	0,2836,4492,5141,6865,7327,7768,9366,19248,21244,21508,21978,22827,
#Partially deleted in new
chr1	156153584	156177743	chr1:156153584-156177743	1	+	156154692	156176997	789624	16	180,31,31,161,63,99,106,117,125,173,151,181,119,158,101,1339,	0,965,1102,2829,4485,4803,5134,6858,7320,7761,9359,19241,21237,21501,21971,22820,
#Partially deleted in new
chr1	156153606	156161028	chr1:156153606-156161028	0	+	156154578	156161028	789624	7	158,168,161,63,106,117,124,	0,943,2807,4463,5112,6836,7298,
#Partially deleted in new
chr1	156154370	156177752	chr1:156154370-156177752	1	+	156154578	156176997	789624	14	347,161,63,99,106,117,125,173,151,181,119,158,101,1348,	0,2043,3699,4017,4348,6072,6534,6975,8573,18455,20451,20715,21185,22034,
#Partially deleted in new
chr1	156154876	156159031	chr1:156154876-156159031	0	+	156154876	156154876	8553170	3	1698,63,644,	0,3193,3511,
#Partially deleted in new
chr1	156156424	156175232	chr1:156156424-156175232	0	+	156156424	156156424	8553170	11	150,63,99,153,117,125,173,151,181,119,147,	0,1645,1963,2247,4018,4480,4921,6519,16401,18397,18661,
#Deleted in new
chr1	156160543	156161669	chr1:156160543-156161669	0	+	156160543	156160543	8553170	3	16,125,324,	0,361,802,
#Partially deleted in new
chr1	156160949	156163298	chr1:156160949-156163298	0	+	156160949	156160949	8553170	3	80,173,355,	0,396,1994,
#Partially deleted in new
chr1	156161226	156175647	chr1:156161226-156175647	0	+	156161226	156161226	8553170	6	292,151,181,119,158,92,	0,1717,11599,13595,13859,14329,
#Partially deleted in new
chr1	156175332	156176656	chr1:156175332-156176656	0	+	156175332	156175332	8553170	2	324,252,	0,1072,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	156192062	156192203	chr1:156192062-156192203	3	-	156192062	156192062	8553170	1	141,	0,
#Partially deleted in new
chr1	156193931	156212795	chr1:156193931-156212795	1	+	156199847	156210431	789624	4	316,638,152,2556,	0,5903,13930,16308,
#Partially deleted in new
chr1	156194088	156212796	chr1:156194088-156212796	3	+	156199847	156210431	789624	4	159,638,128,2557,	0,5746,13797,16151,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	156196204	156212795	chr1:156196204-156212795	0	+	156196204	156196204	8553170	3	4268,128,2556,	0,11681,14035,
#Deleted in new
chr1	156199617	156200186	chr1:156199617-156200186	0	+	156199617	156199617	8553170	2	104,352,	0,217,
#Partially deleted in new
chr1	156200389	156210427	chr1:156200389-156210427	0	+	156200389	156200389	8553170	2	83,188,	0,9850,
#Partially deleted in new
chr1	156212981	156243332	chr1:156212981-156243332	3	+	156213015	156242794	789624	7	195,106,101,196,39,70,300,	0,19338,20646,23306,29571,29780,30051,
#Partially deleted in new
chr1	156212992	156240040	chr1:156212992-156240040	1	+	156213015	156239587	0	5	184,106,101,135,493,	0,19327,20635,23356,26555,
#Partially deleted in new
chr1	156213005	156239851	chr1:156213005-156239851	1	+	156213015	156239601	0	5	171,112,101,196,304,	0,12551,20622,23282,26542,
#Partially deleted in new
chr1	156213006	156243263	chr1:156213006-156243263	1	+	156213015	156243083	789624	7	170,106,101,135,39,70,231,	0,19313,20621,23342,29546,29755,30026,
#Partially deleted in new
chr1	156213006	156240042	chr1:156213006-156240042	3	+	156213015	156239601	0	5	170,106,101,196,495,	0,19313,20621,23281,26541,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	156213006	156237291	chr1:156213006-156237291	0	+	156213006	156213006	8553170	3	170,101,1004,	0,20621,23281,
#Partially deleted in new
chr1	156213008	156243321	chr1:156213008-156243321	1	+	156213015	156243083	789624	6	168,106,101,39,70,289,	0,19311,20619,29544,29753,30024,
#Partially deleted in new
chr1	156213008	156243214	chr1:156213008-156243214	1	+	156213015	156242794	789624	5	168,196,39,70,182,	0,23279,29544,29753,30024,
#Partially deleted in new
chr1	156213025	156239718	chr1:156213025-156239718	0	+	156213025	156232337	789624	6	151,112,106,101,196,171,	0,12531,19294,20602,23262,26522,
#Deleted in new
chr1	156241961	156243321	chr1:156241961-156243321	3	+	156242231	156243162	789624	4	334,39,70,289,	0,591,800,1071,
#Deleted in new
chr1	156242188	156243289	chr1:156242188-156243289	0	+	156242188	156242188	8553170	2	403,528,	0,573,
#Deleted in new
chr1	156243320	156248117	chr1:156243320-156248117	1	-	156243860	156245848	789624	7	1083,222,97,127,469,76,203,	0,1369,1821,2214,2461,3360,4594,
#Deleted in new
chr1	156243320	156248117	chr1:156243320-156248117	1	-	156243860	156244853	789624	5	1083,151,206,128,161,	0,1440,2461,2802,4636,
#Deleted in new
chr1	156243320	156248117	chr1:156243320-156248117	1	-	156243860	156245646	789624	6	1083,100,97,127,469,161,	0,1369,1821,2214,2461,4636,
#Deleted in new
chr1	156243320	156248117	chr1:156243320-156248117	1	-	156243860	156244853	789624	5	1083,151,128,76,161,	0,1440,2802,3360,4636,
#Deleted in new
chr1	156243320	156248117	chr1:156243320-156248117	1	-	156243860	156244853	789624	5	1083,151,97,469,161,	0,1440,1821,2461,4636,
#Deleted in new
chr1	156243414	156248090	chr1:156243414-156248090	3	-	156244128	156246731	789624	8	989,151,97,127,206,128,76,134,	0,1346,1727,2120,2367,2708,3266,4542,
#Deleted in new
chr1	156243414	156248076	chr1:156243414-156248076	0	-	156243414	156243414	8553170	7	989,151,97,127,469,76,120,	0,1346,1727,2120,2367,3266,4542,
#Deleted in new
chr1	156243415	156248052	chr1:156243415-156248052	0	-	156243415	156243415	8553170	7	988,222,97,127,469,76,138,	0,1274,1726,2119,2366,3265,4499,
#Deleted in new
chr1	156243421	156248056	chr1:156243421-156248056	0	-	156244862	156246731	789624	7	982,151,97,206,128,76,142,	0,1339,1720,2360,2701,3259,4493,
#Deleted in new
chr1	156243421	156248056	chr1:156243421-156248056	0	-	156243421	156243421	8553170	5	982,151,97,469,100,	0,1339,1720,2360,4535,
#Deleted in new
chr1	156243422	156248031	chr1:156243422-156248031	1	-	156244128	156246229	789624	7	981,151,97,127,206,128,75,	0,1338,1719,2112,2359,2700,4534,
#Deleted in new
chr1	156243422	156248036	chr1:156243422-156248036	0	-	156243422	156243422	8553170	7	981,151,97,127,469,76,122,	0,1338,1719,2112,2359,3258,4492,
#Deleted in new
chr1	156243686	156248073	chr1:156243686-156248073	0	-	156243686	156243686	8553170	6	717,100,97,127,469,117,	0,1003,1455,1848,2095,4270,
#Deleted in new
chr1	156243911	156248056	chr1:156243911-156248056	1	-	156244128	156246731	789624	9	492,151,97,127,206,128,67,123,100,	0,849,1230,1623,1870,2211,2778,3598,4045,
#Deleted in new
chr1	156244773	156248014	chr1:156244773-156248014	0	-	156244773	156244773	8553170	6	138,136,206,128,76,58,	0,368,1008,1349,1907,3183,
#Deleted in new
chr1	156245153	156248054	chr1:156245153-156248054	0	-	156245153	156245153	8553170	6	124,127,206,128,76,98,	0,381,628,969,1527,2803,
#Deleted in new
chr1	156245216	156248056	chr1:156245216-156248056	0	-	156245216	156245216	8553170	5	61,127,206,128,100,	0,318,565,906,2740,
#Partially deleted in new
chr1	156249223	156282825	chr1:156249223-156282825	3	-	156250586	156282680	0	22	1447,139,75,91,160,60,159,176,76,176,600,138,209,69,126,79,90,90,157,124,99,219,	0,1634,2179,3190,3695,4225,9781,11227,12109,14171,16557,17317,18246,18891,19066,23096,24137,25373,27861,28701,29712,33383,
#Deleted in new
chr1	156250032	156251380	chr1:156250032-156251380	0	-	156250032	156250032	8553170	2	638,523,	0,825,
#Deleted in new
chr1	156251078	156252555	chr1:156251078-156252555	0	-	156251078	156251078	8553170	2	399,142,	0,1335,
#Deleted in new
chr1	156253047	156253762	chr1:156253047-156253762	0	-	156253047	156253047	8553170	2	31,314,	0,401,
#Partially deleted in new
chr1	156266136	156267588	chr1:156266136-156267588	0	-	156266136	156266136	8553170	3	244,172,119,	0,370,1333,
#Partially deleted in new
chr1	156282934	156292443	chr1:156282934-156292443	0	+	156282934	156282934	8553170	5	131,84,459,214,1059,	0,2249,2590,3325,8450,
#Partially deleted in new
chr1	156282947	156292443	chr1:156282947-156292443	3	+	156285226	156291598	789624	4	118,800,214,1059,	0,2236,3312,8437,
#Partially deleted in new
chr1	156282952	156291948	chr1:156282952-156291948	1	+	156285226	156291657	789624	4	113,84,214,564,	0,2231,3307,8432,
#Partially deleted in new
chr1	156284278	156292443	chr1:156284278-156292443	1	+	156285226	156291598	789624	4	128,800,214,1059,	0,905,1981,7106,
#Partially deleted in new
chr1	156284313	156292443	chr1:156284313-156292443	0	+	156284313	156284313	8553170	3	93,1290,1059,	0,870,7071,
#Partially deleted in new
chr1	156284321	156291525	chr1:156284321-156291525	0	+	156285226	156291525	789624	4	85,84,214,141,	0,862,1938,7063,
#Partially deleted in new
chr1	156286275	156293185	chr1:156286275-156293185	0	+	156286275	156286275	8553170	3	198,318,459,	0,5109,6451,
#Partially deleted in new
chr1	156290088	156293381	chr1:156290088-156293381	0	-	156293043	156293381	789624	3	272,324,62,	0,2797,3231,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	156290095	156291550	chr1:156290095-156291550	0	-	156290095	156290095	8553170	3	265,130,148,	0,881,1307,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	156290540	156295654	chr1:156290540-156295654	0	-	156293105	156295645	789624	4	566,235,258,129,	0,2345,4218,4985,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	156290579	156295680	chr1:156290579-156295680	0	-	156293043	156295645	8553170	7	527,324,257,219,201,258,155,	0,2306,2740,3438,3785,4179,4946,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	156290686	156291506	chr1:156290686-156291506	0	-	156290686	156290686	8553170	2	420,104,	0,716,
#Deleted in new
chr1	156292686	156295689	chr1:156292686-156295689	1	-	156293011	156295645	789624	5	523,219,201,258,164,	0,1331,1678,2072,2839,
#Deleted in new
chr1	156292686	156295689	chr1:156292686-156295689	1	-	156293043	156294893	789624	6	523,257,219,201,258,393,	0,633,1331,1678,2072,2610,
#Deleted in new
chr1	156292686	156295689	chr1:156292686-156295689	1	-	156293043	156295645	789624	5	523,257,219,201,164,	0,633,1331,1678,2839,
#Deleted in new
chr1	156292687	156295672	chr1:156292687-156295672	3	-	156293043	156295645	789624	6	522,257,219,201,258,147,	0,632,1330,1677,2071,2838,
#Deleted in new
chr1	156292687	156293667	chr1:156292687-156293667	0	-	156292687	156292687	8553170	2	522,50,	0,930,
#Deleted in new
chr1	156292694	156294076	chr1:156292694-156294076	0	-	156293043	156294076	789624	3	515,110,59,	0,625,1323,
#Deleted in new
chr1	156293372	156295653	chr1:156293372-156295653	0	-	156294458	156295645	789624	5	204,219,161,83,128,	0,645,992,1303,2153,
#Deleted in new
chr1	156293383	156294513	chr1:156293383-156294513	0	-	156293383	156293383	8553170	2	853,149,	0,981,
#Deleted in new
chr1	156293422	156295654	chr1:156293422-156295654	0	-	156293698	156295645	789624	4	288,219,201,129,	0,595,942,2103,
#Deleted in new
chr1	156293517	156294992	chr1:156293517-156294992	0	-	156293517	156293517	8553170	3	59,219,628,	0,500,847,
#Deleted in new
chr1	156293616	156295647	chr1:156293616-156295647	0	-	156293616	156293616	8553170	3	620,201,122,	0,748,1909,
#Deleted in new
chr1	156298623	156299299	chr1:156298623-156299299	3	-	156298769	156299189	789624	1	676,	0,
#Partially deleted in new
chr1	156308967	156338465	chr1:156308967-156338465	3	-	156309198	156338184	789624	14	336,132,246,181,82,133,150,187,118,97,63,51,62,312,	0,1590,1982,3073,8198,8447,9900,11871,16004,24579,25745,25900,26859,29186,
#Partially deleted in new
chr1	156308968	156338263	chr1:156308968-156338263	0	-	156334734	156338184	789624	13	335,132,246,181,82,133,150,187,118,97,63,51,110,	0,1589,1981,3072,8197,8446,9899,11870,16003,24578,25744,25899,29185,
#Partially deleted in new
chr1	156308968	156338245	chr1:156308968-156338245	1	-	156309198	156338184	789624	12	335,132,246,181,82,133,150,187,118,97,62,92,	0,1589,1981,3072,8197,8446,9899,11870,16003,24578,26858,29185,
#Partially deleted in new
chr1	156308991	156325089	chr1:156308991-156325089	0	-	156308991	156308991	8553170	6	312,84,12,150,187,118,	0,1566,8544,9876,11847,15980,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	156309013	156338247	chr1:156309013-156338247	0	-	156337106	156338184	789624	15	290,132,246,181,82,133,150,187,118,97,63,51,62,162,94,	0,1544,1936,3027,8152,8401,9854,11825,15958,24533,25699,25854,26813,28065,29140,
#Partially deleted in new
chr1	156309164	156338257	chr1:156309164-156338257	1	-	156309198	156334876	789624	15	139,132,246,181,82,133,150,187,118,97,63,51,62,113,104,	0,1393,1785,2876,8001,8250,9703,11674,15807,24382,25548,25703,26662,28512,28989,
#Partially deleted in new
chr1	156318869	156367859	chr1:156318869-156367859	0	-	156318869	156367846	789624	8	148,187,118,97,63,51,62,116,	0,1969,6102,14677,15843,15998,16957,48874,
#Partially deleted in new
chr1	156318920	156338229	chr1:156318920-156338229	0	-	156318920	156338184	789624	8	97,187,115,97,63,51,62,76,	0,1918,6051,14626,15792,15947,16906,19233,
#Partially deleted in new
chr1	156318956	156338292	chr1:156318956-156338292	0	-	156318956	156333613	789624	5	61,187,118,76,139,	0,1882,6015,14590,19197,
#Partially deleted in new
chr1	156320838	156367837	chr1:156320838-156367837	0	-	156320838	156320838	8553170	6	187,118,97,63,51,94,	0,4133,12708,13874,14029,46905,
#Partially deleted in new
chr1	156320839	156367873	chr1:156320839-156367873	0	-	156320839	156367846	789624	5	186,118,97,62,130,	0,4132,12707,14987,46904,
#Partially deleted in new
chr1	156320839	156336007	chr1:156320839-156336007	0	-	156320839	156320839	8553170	6	186,118,97,63,51,181,	0,4132,12707,13873,14028,14987,
#Partially deleted in new
chr1	156320922	156338305	chr1:156320922-156338305	0	-	156320922	156338184	789624	6	103,118,97,51,62,152,	0,4049,12624,13945,14904,17231,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	156332652	156338311	chr1:156332652-156338311	0	-	156332652	156332652	8553170	6	632,97,63,51,62,158,	0,894,2060,2215,3174,5501,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	156335114	156338206	chr1:156335114-156338206	0	-	156335114	156335114	8553170	2	774,53,	0,3039,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	156337313	156346995	chr1:156337313-156346995	3	+	156339757	156346982	789624	4	236,158,129,228,	0,2320,7266,9454,
#Partially deleted in new
chr1	156338502	156346990	chr1:156338502-156346990	1	+	156339757	156346982	789624	4	103,57,129,223,	0,1232,6077,8265,
#Partially deleted in new
chr1	156338506	156346993	chr1:156338506-156346993	1	+	156339757	156346918	789624	4	99,158,129,215,	0,1127,6073,8272,
#Partially deleted in new
chr1	156338522	156346995	chr1:156338522-156346995	1	+	156339757	156346982	789624	4	83,158,129,228,	0,1111,6057,8245,
#Partially deleted in new
chr1	156338627	156346995	chr1:156338627-156346995	1	+	156339757	156346918	789624	4	237,158,129,217,	0,1006,5952,8151,
#Partially deleted in new
chr1	156338693	156346995	chr1:156338693-156346995	1	+	156339757	156346982	789624	4	77,57,129,228,	0,1041,5886,8074,
#Partially deleted in new
chr1	156338787	156346992	chr1:156338787-156346992	1	+	156339757	156346918	789624	4	77,57,129,214,	0,947,5792,7991,
#Partially deleted in new
chr1	156338901	156346995	chr1:156338901-156346995	1	+	156339757	156346982	789624	4	24,57,129,228,	0,833,5678,7866,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	156369211	156371879	chr1:156369211-156371879	0	+	156369211	156369211	8553170	2	225,698,	0,1970,
#Partially deleted in new
chr1	156369211	156385219	chr1:156369211-156385219	3	+	156369249	156384845	789624	10	225,187,151,148,167,138,134,122,74,443,	0,8089,8778,9040,12135,12594,12856,13536,15315,15565,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	156369211	156385219	chr1:156369211-156385219	0	+	156369249	156378004	789624	11	225,73,187,151,148,167,138,134,122,74,443,	0,1970,8089,8778,9040,12135,12594,12856,13536,15315,15565,
#Partially deleted in new
chr1	156382142	156384884	chr1:156382142-156384884	0	+	156382142	156382142	8553170	4	59,122,35,108,	0,605,2423,2634,
#Partially deleted in new
chr1	156382312	156384603	chr1:156382312-156384603	0	+	156382312	156382312	8553170	2	557,163,	0,2128,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	156388225	156395609	chr1:156388225-156395609	3	+	156388225	156388225	8553170	2	138,5448,	0,1936,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	156404249	156417439	chr1:156404249-156417439	0	-	156404249	156404249	8553170	2	352,2786,	0,10404,
#Partially deleted in new
chr1	156404251	156429423	chr1:156404251-156429423	0	-	156404525	156429423	789624	3	350,75,48,	0,22546,25124,
#Partially deleted in new
chr1	156404252	156420336	chr1:156404252-156420336	0	-	156404553	156420336	789624	5	349,118,134,100,166,	0,2827,3589,10401,15918,
#Partially deleted in new
chr1	156404255	156426872	chr1:156404255-156426872	0	-	156404255	156404255	8553170	4	346,243,100,75,	0,9800,10398,22542,
#Partially deleted in new
chr1	156404255	156429579	chr1:156404255-156429579	0	-	156404255	156404255	789624	4	346,100,75,204,	0,10398,22542,25120,
#Partially deleted in new
chr1	156404256	156421752	chr1:156404256-156421752	0	-	156404256	156404256	789624	2	345,198,	0,17298,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	156404256	156409030	chr1:156404256-156409030	0	-	156404256	156404256	8553170	1	4774,	0,
#Partially deleted in new
chr1	156404256	156416839	chr1:156404256-156416839	1	-	156404553	156416839	789624	5	345,118,134,100,71,	0,2823,3585,10397,12512,
#Partially deleted in new
chr1	156404257	156416939	chr1:156404257-156416939	0	-	156404257	156404257	8553170	3	344,100,1543,	0,10396,11139,
#Partially deleted in new
chr1	156404258	156421752	chr1:156404258-156421752	0	-	156404258	156404258	8553170	4	343,85,100,198,	0,9154,10395,17296,
#Partially deleted in new
chr1	156404260	156429413	chr1:156404260-156429413	0	-	156404525	156429413	789624	5	341,134,100,75,38,	0,3581,10393,22537,25115,
#Partially deleted in new
chr1	156404260	156412708	chr1:156404260-156412708	0	-	156404260	156404260	8553170	2	341,187,	0,8261,
#Partially deleted in new
chr1	156404262	156429392	chr1:156404262-156429392	3	-	156404553	156416839	789624	7	339,118,134,100,96,75,17,	0,2817,3579,10391,12506,22535,25113,
#Partially deleted in new
chr1	156404263	156408091	chr1:156404263-156408091	0	-	156404263	156404263	8553170	2	338,250,	0,3578,
#Partially deleted in new
chr1	156404363	156421758	chr1:156404363-156421758	0	-	156404363	156404363	789624	3	238,100,204,	0,10290,17191,
#Partially deleted in new
chr1	156404379	156420289	chr1:156404379-156420289	0	-	156404379	156404379	8553170	3	222,134,119,	0,3462,15791,
#Partially deleted in new
chr1	156404411	156429410	chr1:156404411-156429410	0	-	156404553	156429410	789624	6	190,118,134,100,75,35,	0,2668,3430,10242,22386,24964,
#Partially deleted in new
chr1	156404507	156413478	chr1:156404507-156413478	0	-	156404507	156404507	8553170	4	94,118,134,66,	0,2572,3334,8905,
#Partially deleted in new
chr1	156407173	156421756	chr1:156407173-156421756	0	-	156407173	156407173	789624	6	24,134,243,100,123,202,	0,668,6882,7480,10738,14381,
#Partially deleted in new
chr1	156407696	156420318	chr1:156407696-156420318	0	-	156407696	156407696	8553170	2	279,148,	0,12474,
#Partially deleted in new
chr1	156407841	156429401	chr1:156407841-156429401	0	-	156407841	156407841	8553170	5	134,243,100,75,26,	0,6214,6812,18956,21534,
#Partially deleted in new
chr1	156407853	156429399	chr1:156407853-156429399	0	-	156407853	156407853	8553170	5	122,215,100,75,24,	0,6230,6800,18944,21522,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	156411830	156429429	chr1:156411830-156429429	0	-	156411830	156411830	8553170	4	2468,100,75,54,	0,2823,14967,17545,
#Partially deleted in new
chr1	156413915	156421756	chr1:156413915-156421756	0	-	156413915	156413915	8553170	3	383,100,202,	0,738,7639,
#Partially deleted in new
chr1	156414106	156421809	chr1:156414106-156421809	0	-	156414106	156414106	8553170	5	192,100,96,123,255,	0,547,2662,3805,7448,
#Deleted in new
chr1	156420340	156420429	chr1:156420340-156420429	3	-	156420340	156420340	5263520	1	89,	0,
#Deleted in new
chr1	156425636	156430701	chr1:156425636-156430701	0	-	156425636	156425636	8553170	5	1032,75,173,90,205,	0,1161,3739,4393,4860,
#Deleted in new
chr1	156425824	156429418	chr1:156425824-156429418	0	-	156425824	156425824	8553170	2	1048,43,	0,3551,
#Partially deleted in new
chr1	156446411	156456466	chr1:156446411-156456466	3	-	156446411	156446411	8553170	4	162,153,94,114,	0,8231,9216,9941,
#Partially deleted in new
chr1	156452896	156456577	chr1:156452896-156456577	1	-	156452896	156452896	8553170	3	356,94,225,	0,2731,3456,
#Partially deleted in new
chr1	156463726	156500828	chr1:156463726-156500828	1	-	156467644	156483292	789624	12	3930,307,241,130,21,191,57,211,138,204,192,343,	0,4266,5053,11381,12767,13285,15563,15859,17107,18710,19512,36759,
#Partially deleted in new
chr1	156463726	156483430	chr1:156463726-156483430	3	-	156467644	156483292	789624	10	3930,307,241,130,191,57,211,135,204,192,	0,4266,5053,11381,13285,15563,15859,16916,18710,19512,
#Partially deleted in new
chr1	156466209	156490599	chr1:156466209-156490599	1	-	156467644	156483292	789624	11	1447,307,241,130,191,57,211,138,204,180,88,	0,1783,2570,8898,10802,13080,13376,14624,16227,17029,24302,
#Partially deleted in new
chr1	156466217	156500753	chr1:156466217-156500753	1	-	156479322	156483292	789624	10	281,26,307,241,191,57,138,204,192,268,	0,1413,1775,2562,10794,13072,14616,16219,17021,34268,
#Partially deleted in new
chr1	156467627	156500753	chr1:156467627-156500753	0	-	156479322	156483292	789624	9	29,307,241,191,57,138,204,192,268,	0,365,1152,9384,11662,13206,14809,15611,32858,
#Partially deleted in new
chr1	156476928	156479780	chr1:156476928-156479780	0	-	156476928	156476928	8553170	3	274,57,195,	0,2361,2657,
#Partially deleted in new
chr1	156483260	156500779	chr1:156483260-156500779	0	-	156483260	156483292	789624	3	170,129,294,	0,16171,17225,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	156484097	156484210	chr1:156484097-156484210	3	-	156484097	156484097	8553170	1	113,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	156509853	156511681	chr1:156509853-156511681	3	+	156509853	156509853	8553170	1	1828,	0,
#Partially deleted in new
chr1	156525404	156572540	chr1:156525404-156572540	3	-	156526485	156572529	0	38	1195,109,102,167,213,88,127,103,133,233,85,141,225,164,153,209,70,72,84,171,140,168,91,164,122,158,161,88,164,79,179,114,68,77,78,157,88,48,	0,2547,3104,3511,4700,5755,7575,8368,8604,9096,9758,11776,13404,13969,14433,15303,18576,18747,18984,22668,22943,23176,24856,26300,26569,28830,31128,35529,36433,37182,37729,38148,38352,39210,40622,40985,43971,47088,
#Partially deleted in new
chr1	156525404	156572604	chr1:156525404-156572604	0	-	156526485	156566542	789624	38	148,377,109,102,167,213,88,127,103,133,233,85,141,225,164,153,209,70,72,84,171,140,168,91,164,122,158,161,88,164,79,179,114,68,77,78,157,112,	0,818,2547,3104,3511,4700,5755,7575,8368,8604,9096,9758,11776,13404,13969,14433,15303,18576,18747,18984,22668,22943,23176,24856,26300,26569,28830,31128,35529,36433,37182,37729,38148,38352,39210,40622,40985,47088,
#Partially deleted in new
chr1	156536830	156538861	chr1:156536830-156538861	0	-	156536830	156536830	8553170	2	491,53,	0,1978,
#Partially deleted in new
chr1	156537175	156539465	chr1:156537175-156539465	0	-	156537175	156537175	8553170	2	146,657,	0,1633,
#Partially deleted in new
chr1	156579726	156586770	chr1:156579726-156586770	3	+	156581364	156586550	789624	11	32,710,204,129,113,99,98,107,114,97,302,	0,1634,2504,3315,3611,4070,5150,5398,5986,6222,6742,
#Deleted in new
chr1	156581364	156586770	chr1:156581364-156586770	1	+	156581364	156586550	789624	10	706,204,129,113,99,98,107,114,97,302,	0,866,1677,1973,2432,3512,3760,4348,4584,5104,
#Deleted in new
chr1	156582066	156585244	chr1:156582066-156585244	0	+	156582066	156582066	8553170	6	4,204,129,96,98,120,	0,164,975,1733,2810,3058,
#Deleted in new
chr1	156582292	156585227	chr1:156582292-156585227	0	+	156582292	156582292	8553170	4	142,129,98,103,	0,749,2584,2832,
#Deleted in new
chr1	156582426	156585841	chr1:156582426-156585841	0	+	156582426	156582426	8553170	4	8,96,98,717,	0,1373,2450,2698,
#Deleted in new
chr1	156584548	156585516	chr1:156584548-156585516	0	+	156584548	156584548	8553170	2	426,392,	0,576,
#Partially deleted in new
chr1	156591761	156594131	chr1:156591761-156594131	1	+	156591804	156594056	789624	6	225,109,111,114,92,250,	0,339,603,795,1702,2120,
#Partially deleted in new
chr1	156591761	156594299	chr1:156591761-156594299	3	+	156591804	156594084	789624	6	225,109,111,114,148,418,	0,339,603,795,1646,2120,
#Partially deleted in new
chr1	156591777	156593876	chr1:156591777-156593876	1	+	156591804	156593629	789624	5	209,109,111,114,469,	0,323,587,779,1630,
#Deleted in new
chr1	156591891	156593024	chr1:156591891-156593024	0	+	156591891	156591891	8553170	4	95,105,111,468,	0,213,473,665,
#Deleted in new
chr1	156593274	156594129	chr1:156593274-156594129	0	+	156593274	156593274	8553170	2	281,248,	0,607,
#Partially deleted in new
chr1	156594486	156601483	chr1:156594486-156601483	3	-	156595212	156599046	789624	8	1363,51,92,87,93,74,137,75,	0,1594,1900,3548,3740,3934,4481,6922,
#Partially deleted in new
chr1	156595212	156601470	chr1:156595212-156601470	1	-	156595212	156601439	789624	8	637,51,92,87,93,74,63,62,	0,868,1174,2822,3014,3208,3755,6196,
#Partially deleted in new
chr1	156595444	156601490	chr1:156595444-156601490	0	-	156595444	156599046	789624	7	405,51,92,93,74,137,82,	0,636,942,2782,2976,3523,5964,
#Deleted in new
chr1	156595597	156598124	chr1:156595597-156598124	0	-	156595597	156595597	8553170	3	252,398,90,	0,483,2437,
#Deleted in new
chr1	156595605	156599046	chr1:156595605-156599046	0	-	156595605	156595605	8553170	7	244,168,92,87,93,74,79,	0,475,781,2429,2621,2815,3362,
#Partially deleted in new
chr1	156595666	156601462	chr1:156595666-156601462	0	-	156597858	156599046	789624	9	183,51,92,86,87,93,74,137,54,	0,414,720,2133,2368,2560,2754,3301,5742,
#Deleted in new
chr1	156595716	156596505	chr1:156595716-156596505	0	-	156595716	156595716	8553170	2	415,119,	0,670,
#Partially deleted in new
chr1	156595719	156601471	chr1:156595719-156601471	0	-	156595719	156595719	8553170	5	130,2041,93,137,63,	0,361,2507,3248,5689,
#Deleted in new
chr1	156595719	156596502	chr1:156595719-156596502	0	-	156595719	156595719	8553170	2	130,422,	0,361,
#Partially deleted in new
chr1	156596079	156601479	chr1:156596079-156601479	0	-	156596079	156596079	8553170	6	52,92,87,93,137,71,	0,307,1955,2147,2888,5329,
#Partially deleted in new
chr1	156596080	156601470	chr1:156596080-156601470	0	-	156597823	156599046	789624	8	51,92,123,87,93,74,137,62,	0,306,1719,1954,2146,2340,2887,5328,
#Partially deleted in new
chr1	156596293	156601466	chr1:156596293-156601466	0	-	156596293	156596293	8553170	6	185,87,93,74,137,58,	0,1741,1933,2127,2674,5115,
#Partially deleted in new
chr1	156597467	156601479	chr1:156597467-156601479	0	-	156597467	156597467	8553170	5	654,93,74,137,71,	0,759,953,1500,3941,
#Partially deleted in new
chr1	156597763	156601496	chr1:156597763-156601496	0	-	156597763	156597763	8553170	3	556,137,88,	0,1204,3645,
#Partially deleted in new
chr1	156597939	156601470	chr1:156597939-156601470	0	-	156597939	156597939	8553170	4	380,74,137,62,	0,481,1028,3469,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	156598966	156601479	chr1:156598966-156601479	0	-	156598966	156598966	8553170	2	442,71,	0,2442,
#Deleted in new
chr1	156614741	156615288	chr1:156614741-156615288	3	-	156614741	156614741	8553170	1	547,	0,
#Partially deleted in new
chr1	156619293	156625725	chr1:156619293-156625725	3	+	156623490	156625384	789624	7	242,141,109,354,117,183,625,	0,724,4173,4513,5057,5307,5807,
#Partially deleted in new
chr1	156619330	156623790	chr1:156619330-156623790	0	+	156619330	156619330	8553170	3	205,190,324,	0,638,4136,
#Partially deleted in new
chr1	156619423	156624467	chr1:156619423-156624467	0	+	156623490	156624467	789624	5	112,190,109,354,117,	0,545,4043,4383,4927,
#Partially deleted in new
chr1	156619445	156623914	chr1:156619445-156623914	0	+	156619445	156619445	8553170	3	90,141,448,	0,572,4021,
#Deleted in new
chr1	156624063	156625535	chr1:156624063-156625535	0	+	156624063	156624063	8553170	3	404,183,435,	0,537,1037,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	156637782	156641004	chr1:156637782-156641004	3	-	156637782	156637782	8553170	1	3222,	0,
#Deleted in new
chr1	156641389	156647144	chr1:156641389-156647144	0	+	156646054	156647144	789624	4	45,112,99,344,	0,774,4657,5411,
#Deleted in new
chr1	156641665	156644887	chr1:156641665-156644887	3	-	156641665	156641665	8553170	1	3222,	0,
#Partially deleted in new
chr1	156641947	156659528	chr1:156641947-156659528	3	+	156646054	156659134	789624	14	328,99,375,175,128,294,234,645,108,159,83,145,191,502,	0,4099,4853,5560,6035,6620,9508,10300,14334,14990,15727,16179,16595,17079,
#Deleted in new
chr1	156642113	156647682	chr1:156642113-156647682	0	+	156646054	156647682	789624	4	158,99,375,175,	0,3933,4687,5394,
#Deleted in new
chr1	156642129	156648798	chr1:156642129-156648798	0	+	156646054	156648798	789624	6	142,99,69,175,128,231,	0,3917,4977,5378,5853,6438,
#Partially deleted in new
chr1	156642131	156652678	chr1:156642131-156652678	0	+	156646054	156648107	789624	7	144,99,375,128,294,234,431,	0,3915,4669,5851,6436,9324,10116,
#Partially deleted in new
chr1	156642242	156653472	chr1:156642242-156653472	1	+	156646054	156652966	789624	8	33,99,375,175,128,294,234,1225,	0,3804,4558,5265,5740,6325,9213,10005,
#Partially deleted in new
chr1	156646506	156661424	chr1:156646506-156661424	3	-	156646506	156646506	8553170	2	648,110,	0,14808,
#Partially deleted in new
chr1	156647127	156651551	chr1:156647127-156651551	0	+	156647127	156647377	789624	6	48,49,175,128,294,96,	0,218,380,855,1440,4328,
#Deleted in new
chr1	156656728	156659532	chr1:156656728-156659532	0	+	156656728	156656728	8553170	4	1029,145,191,506,	0,1398,1814,2298,
#Deleted in new
chr1	156668762	156677397	chr1:156668762-156677397	3	-	156669321	156677264	789624	4	4443,74,125,916,	0,4691,6453,7719,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	156687694	156691997	chr1:156687694-156691997	3	-	156687694	156687694	8553170	2	3187,935,	0,3368,
#Partially deleted in new
chr1	156689675	156704757	chr1:156689675-156704757	3	+	156689675	156689675	8553170	2	149,807,	0,14275,
#Partially deleted in new
chr1	156699605	156705601	chr1:156699605-156705601	1	-	156700025	156705446	0	4	471,117,179,225,	0,936,1268,5771,
#Partially deleted in new
chr1	156699617	156705816	chr1:156699617-156705816	3	-	156700025	156705446	0	5	459,117,179,170,108,	0,924,1256,5759,6091,
#Partially deleted in new
chr1	156699755	156705747	chr1:156699755-156705747	1	-	156700025	156705446	0	5	321,117,179,127,39,	0,786,1118,5621,5953,
#Partially deleted in new
chr1	156700874	156705816	chr1:156700874-156705816	0	-	156700874	156705446	789624	3	178,170,108,	0,4502,4834,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	156712211	156713174	chr1:156712211-156713174	3	-	156712211	156712211	8553170	2	136,297,	0,666,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	156721890	156728435	chr1:156721890-156728435	3	-	156723348	156727652	789624	3	1572,201,1530,	0,2257,5015,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	156721890	156725867	chr1:156721890-156725867	0	-	156721890	156721890	8553170	3	1572,201,1405,	0,2257,2572,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	156722602	156728799	chr1:156722602-156728799	1	-	156723348	156727652	789624	4	860,201,864,385,	0,1545,4303,5812,
#Partially deleted in new
chr1	156723957	156727386	chr1:156723957-156727386	0	-	156723957	156723957	8553170	2	391,481,	0,2948,
#Deleted in new
chr1	156727210	156728429	chr1:156727210-156728429	0	-	156727210	156727210	8553170	2	559,76,	0,1143,
#Deleted in new
chr1	156727241	156728441	chr1:156727241-156728441	0	-	156727241	156727241	8553170	2	567,27,	0,1173,
#Partially deleted in new
chr1	156728441	156736949	chr1:156728441-156736949	1	+	156729104	156736644	789624	7	774,125,193,63,144,185,318,	0,3549,3839,4543,4935,7283,8190,
#Partially deleted in new
chr1	156728474	156736949	chr1:156728474-156736949	3	+	156729104	156736753	789624	8	741,125,193,63,144,485,185,318,	0,3516,3806,4510,4902,5534,7250,8157,
#Partially deleted in new
chr1	156728948	156734470	chr1:156728948-156734470	0	+	156729104	156734470	789624	5	267,125,193,144,462,	0,3042,3332,4428,5060,
#Partially deleted in new
chr1	156728959	156732994	chr1:156728959-156732994	1	+	156729104	156732454	789624	3	256,193,10,	0,3321,4025,
#Partially deleted in new
chr1	156729515	156733492	chr1:156729515-156733492	0	+	156732350	156733492	789624	4	47,483,63,116,	0,2475,3469,3861,
#Partially deleted in new
chr1	156732024	156736949	chr1:156732024-156736949	1	+	156732350	156736644	789624	4	449,144,185,318,	0,1352,3700,4607,
#Partially deleted in new
chr1	156732251	156733649	chr1:156732251-156733649	0	+	156732251	156732251	8553170	4	35,108,63,273,	0,114,733,1125,
#Partially deleted in new
chr1	156732384	156735800	chr1:156732384-156735800	0	+	156732384	156735800	789624	5	89,63,144,44,76,	0,600,992,1624,3340,
#Deleted in new
chr1	156733471	156734141	chr1:156733471-156734141	0	+	156733471	156733471	8553170	2	154,133,	0,537,
#Partially deleted in new
chr1	156735621	156736960	chr1:156735621-156736960	0	+	156735621	156735621	8553170	2	288,329,	0,1010,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	156736157	156736902	chr1:156736157-156736902	0	+	156736157	156736157	8553170	2	427,222,	0,523,
#Partially deleted in new
chr1	156737302	156741088	chr1:156737302-156741088	1	-	156737397	156738704	0	6	232,131,104,96,243,77,	0,343,728,1040,1219,3709,
#Deleted in new
chr1	156737302	156738227	chr1:156737302-156738227	0	-	156737302	156737302	8553170	3	232,131,197,	0,343,728,
#Partially deleted in new
chr1	156737304	156741131	chr1:156737304-156741131	3	-	156737397	156738704	0	6	230,131,104,96,243,79,	0,341,726,1038,1217,3748,
#Partially deleted in new
chr1	156737529	156741590	chr1:156737529-156741590	0	-	156737529	156738704	789624	6	5,131,104,96,243,411,	0,116,501,813,992,3650,
#Partially deleted in new
chr1	156738117	156741088	chr1:156738117-156741088	0	-	156738117	156738704	789624	4	17,96,243,158,	0,225,404,2813,
#Partially deleted in new
chr1	156738417	156740562	chr1:156738417-156740562	0	-	156738417	156738704	789624	3	21,243,184,	0,104,1961,
#Partially deleted in new
chr1	156742106	156751744	chr1:156742106-156751744	3	-	156743448	156751429	0	6	1349,227,186,139,77,402,	0,1545,2056,2901,3190,9236,
#Partially deleted in new
chr1	156742109	156752233	chr1:156742109-156752233	1	-	156743448	156752103	0	6	1346,227,186,139,77,196,	0,1542,2053,2898,3187,9928,
#Partially deleted in new
chr1	156742109	156751598	chr1:156742109-156751598	1	-	156743448	156751429	0	7	903,285,227,186,139,77,256,	0,1061,1542,2053,2898,3187,9233,
#Partially deleted in new
chr1	156742525	156766925	chr1:156742525-156766925	0	-	156742525	156742525	8553170	8	930,227,186,139,77,128,237,136,	0,1126,1637,2482,2771,13011,16457,24264,
#Partially deleted in new
chr1	156743155	156747471	chr1:156743155-156747471	0	-	156743155	156743155	8553170	6	300,227,186,139,77,37,	0,496,1007,1852,2141,4279,
#Deleted in new
chr1	156743306	156744276	chr1:156743306-156744276	0	-	156743306	156743306	8553170	2	572,114,	0,856,
#Partially deleted in new
chr1	156743344	156752448	chr1:156743344-156752448	1	-	156743448	156752363	0	6	111,227,186,139,77,220,	0,307,818,1663,1952,8884,
#Partially deleted in new
chr1	156743708	156751544	chr1:156743708-156751544	0	-	156743708	156743708	8553170	6	170,186,70,139,77,202,	0,454,792,1299,1588,7634,
#Partially deleted in new
chr1	156743802	156752272	chr1:156743802-156752272	0	-	156743802	156743802	8553170	6	76,186,70,139,77,44,	0,360,698,1205,1494,8426,
#Partially deleted in new
chr1	156743840	156751496	chr1:156743840-156751496	0	-	156743840	156743840	8553170	4	38,186,366,154,	0,322,1167,7502,
#Partially deleted in new
chr1	156750609	156791792	chr1:156750609-156791792	0	+	156750609	156750609	8553170	4	122,48,567,96,	0,31672,35998,41087,
#Partially deleted in new
chr1	156767499	156800817	chr1:156767499-156800817	3	+	156767771	156800460	789624	7	740,48,567,96,144,66,444,	0,14782,19108,24197,27165,29776,32874,
#Partially deleted in new
chr1	156767552	156786980	chr1:156767552-156786980	0	+	156767552	156767552	8553170	3	31,48,373,	0,14729,19055,
#Partially deleted in new
chr1	156786874	156800497	chr1:156786874-156800497	0	+	156786874	156800460	789624	4	300,144,66,124,	0,7790,10401,13499,
#Partially deleted in new
chr1	156786890	156800771	chr1:156786890-156800771	0	+	156786890	156800460	789624	6	284,96,96,144,66,398,	0,4176,4806,7774,10385,13483,
#Partially deleted in new
chr1	156791375	156794804	chr1:156791375-156794804	0	+	156791375	156791375	8553170	2	417,140,	0,3289,
#Partially deleted in new
chr1	156795811	156800812	chr1:156795811-156800812	0	+	156795811	156795811	8553170	2	1530,439,	0,4562,
#Partially deleted in new
chr1	156806242	156816834	chr1:156806242-156816834	1	-	156807177	156816685	789624	9	331,171,288,147,169,90,185,58,160,	0,932,2960,3418,7605,7962,8794,9763,10432,
#Partially deleted in new
chr1	156806242	156816862	chr1:156806242-156816862	3	-	156807177	156816708	789624	9	331,171,288,147,169,90,185,89,188,	0,932,2960,3418,7605,7962,8794,9763,10432,
#Partially deleted in new
chr1	156806243	156816848	chr1:156806243-156816848	1	-	156807177	156816708	789624	9	330,171,288,147,169,120,185,89,174,	0,931,2959,3417,7604,7961,8793,9762,10431,
#Partially deleted in new
chr1	156809202	156814111	chr1:156809202-156814111	0	-	156809202	156809202	8553170	3	288,147,264,	0,458,4645,
#Partially deleted in new
chr1	156809660	156815411	chr1:156809660-156815411	0	-	156809660	156809660	8553170	4	147,169,90,375,	0,4187,4544,5376,
#Deleted in new
chr1	156814497	156816760	chr1:156814497-156816760	0	-	156814497	156814497	8553170	3	724,89,86,	0,1508,2177,
#Partially deleted in new
chr1	156815639	156873890	chr1:156815639-156873890	0	+	156815639	156815639	8553170	3	199,113,258,	0,26441,57993,
#Partially deleted in new
chr1	156815655	156881794	chr1:156815655-156881794	1	+	156815829	156881642	0	17	183,113,75,72,69,146,143,133,327,56,103,147,131,173,241,159,338,	0,26425,48698,49072,51254,52448,52849,55967,57977,58915,59250,59864,60424,60744,63466,64343,65801,
#Partially deleted in new
chr1	156815678	156881849	chr1:156815678-156881849	0	+	156815829	156875573	789624	16	160,113,75,72,69,146,143,327,56,103,147,131,173,241,159,393,	0,26402,48675,49049,51231,52425,52826,57954,58892,59227,59841,60401,60721,63443,64320,65778,
#Partially deleted in new
chr1	156837208	156881850	chr1:156837208-156881850	0	+	156837208	156837208	8553170	17	17,140,113,75,72,69,146,143,133,327,56,103,691,173,241,159,394,	0,517,4872,27145,27519,29701,30895,31296,34414,36424,37362,37697,38311,39191,41913,42790,44248,
#Partially deleted in new
chr1	156840062	156859018	chr1:156840062-156859018	3	-	156840872	156858621	789624	22	1042,135,130,160,111,230,53,106,163,137,221,42,196,168,239,127,215,145,143,304,552,482,	0,1331,1602,2049,2335,2941,3364,4112,4399,4644,5013,5309,5556,5889,6456,8858,9183,11227,11583,11825,13689,18474,
#Partially deleted in new
chr1	156860814	156881850	chr1:156860814-156881850	1	+	156860934	156881642	0	16	332,75,72,69,146,143,133,327,56,103,147,131,173,241,159,394,	0,3539,3913,6095,7289,7690,10808,12818,13756,14091,14705,15265,15585,18307,19184,20642,
#Partially deleted in new
chr1	156860893	156881711	chr1:156860893-156881711	1	+	156860934	156881642	0	16	253,75,72,69,146,143,133,327,56,103,147,140,173,241,159,255,	0,3460,3834,6016,7210,7611,10729,12739,13677,14012,14626,15177,15506,18228,19105,20563,
#Partially deleted in new
chr1	156860893	156881642	chr1:156860893-156881642	3	+	156860934	156881642	0	17	253,75,72,69,146,143,133,327,18,56,103,147,131,173,241,159,186,	0,3460,3834,6016,7210,7611,10729,12739,13489,13677,14012,14626,15186,15506,18228,19105,20563,
#Deleted in new
chr1	156860912	156865063	chr1:156860912-156865063	0	+	156860912	156860912	8553170	3	234,75,336,	0,3441,3815,
#Deleted in new
chr1	156874152	156876199	chr1:156874152-156876199	0	+	156874152	156874152	8553170	4	474,103,147,120,	0,753,1367,1927,
#Deleted in new
chr1	156880000	156881850	chr1:156880000-156881850	0	+	156880000	156880000	8553170	3	157,91,394,	0,448,1456,
#Partially deleted in new
chr1	156893697	156906720	chr1:156893697-156906720	0	+	156903926	156904971	789624	7	140,110,105,55,101,93,84,	0,10220,11050,11246,11626,12578,12939,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr1	156893719	156916429	chr1:156893719-156916429	3	+	156903926	156914798	789624	24	118,98,110,105,101,93,244,121,137,213,175,121,164,103,147,126,129,129,213,89,133,69,249,1783,	0,8468,10198,11028,11604,12556,12917,13890,14195,14408,14935,15196,16031,16286,16514,16898,18527,18774,19050,19474,19671,19972,20132,20927,
#Partially deleted in new
chr1	156893724	156906756	chr1:156893724-156906756	0	+	156903926	156906756	789624	6	113,110,105,101,93,120,	0,10193,11023,11599,12551,12912,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr1	156893730	156916434	chr1:156893730-156916434	1	+	156903926	156914798	789624	23	107,110,105,101,93,244,121,137,213,175,121,164,103,147,126,129,129,213,89,133,69,249,1788,	0,10187,11017,11593,12545,12906,13879,14184,14397,14924,15185,16020,16275,16503,16887,18516,18763,19039,19463,19660,19961,20121,20916,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	156906316	156916426	chr1:156906316-156916426	0	+	156906316	156906316	8553170	18	52,244,121,426,175,121,164,103,147,126,129,129,213,89,133,69,249,1780,	0,320,1293,1598,2338,2599,3434,3689,3917,4301,5930,6177,6453,6877,7074,7375,7535,8330,
#Deleted in new
chr1	156909956	156910573	chr1:156909956-156910573	0	+	156909956	156909956	8553170	2	152,340,	0,277,
#Deleted in new
chr1	156913531	156915148	chr1:156913531-156915148	0	+	156913531	156913531	8553170	3	229,249,502,	0,320,1115,
#Partially deleted in new
chr1	156920649	156933094	chr1:156920649-156933094	3	+	156920803	156932969	789624	15	314,150,129,76,78,69,160,84,90,150,94,89,112,122,242,	0,3299,3774,3993,4288,6552,6846,7083,7265,8630,8986,9879,11266,11774,12203,
#Partially deleted in new
chr1	156920911	156933088	chr1:156920911-156933088	0	+	156920911	156920911	8553170	16	52,88,150,129,76,78,86,160,84,90,150,94,89,115,226,236,	0,690,3037,3512,3731,4026,6273,6584,6821,7003,8368,8724,9617,11001,11512,11941,
#Partially deleted in new
chr1	156927361	156933085	chr1:156927361-156933085	0	+	156927361	156927361	8553170	5	294,84,90,89,233,	0,371,553,3167,5491,
#Deleted in new
chr1	156932097	156933089	chr1:156932097-156933089	0	+	156932097	156932097	8553170	2	448,237,	0,755,
#Partially deleted in new
chr1	156934839	157045370	chr1:156934839-157045370	3	-	156935999	157044330	0	41	1219,190,248,96,363,219,62,126,91,168,76,179,118,126,80,147,188,48,180,127,30,97,145,24,123,97,43,99,102,75,138,77,46,120,72,179,58,50,99,92,1072,	0,1976,2409,3578,4708,5367,6532,7024,7850,9095,9518,10179,11205,11822,12096,12464,12929,13341,13479,16733,20052,20863,21580,22952,23902,24206,25578,26837,28363,28680,33147,34442,35158,36857,42143,43364,44389,45597,49499,51242,109459,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	156934844	156945631	chr1:156934844-156945631	0	-	156934844	156934844	8553170	10	1214,190,248,2008,62,126,91,168,76,613,	0,1971,2404,3573,6527,7019,7845,9090,9513,10174,
#Partially deleted in new
chr1	156935523	157045073	chr1:156935523-157045073	1	-	156935999	157044330	0	40	535,190,248,96,363,219,62,126,91,168,76,179,118,126,80,147,188,48,180,127,30,97,145,24,123,97,43,99,102,75,138,77,46,72,179,58,50,99,92,775,	0,1292,1725,2894,4024,4683,5848,6340,7166,8411,8834,9495,10521,11138,11412,11780,12245,12657,12795,16049,19368,20179,20896,22268,23218,23522,24894,26153,27679,27996,32463,33758,34474,41459,42680,43705,44913,48815,50558,108775,
#Deleted in new
chr1	156936130	156936244	chr1:156936130-156936244	3	-	156936130	156936130	5263520	1	114,	0,
#Partially deleted in new
chr1	156936815	156939740	chr1:156936815-156939740	0	-	156936815	156936815	8553170	5	190,248,96,137,193,	0,433,1602,2333,2732,
#Deleted in new
chr1	156945907	156947378	chr1:156945907-156947378	0	-	156945907	156945907	8553170	4	255,126,80,75,	0,754,1028,1396,
#Partially deleted in new
chr1	156955723	156963766	chr1:156955723-156963766	0	-	156955723	156955723	8553170	10	76,145,24,123,97,43,99,102,75,75,	0,696,2068,3018,3322,4694,5953,7479,7796,7968,
#Deleted in new
chr1	156967910	156971825	chr1:156967910-156971825	0	-	156967910	156967910	8553170	4	214,77,46,129,	0,1371,2087,3786,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	156985754	156986049	chr1:156985754-156986049	3	-	156985754	156985754	8553170	1	295,	0,
#Deleted in new
chr1	157059231	157060762	chr1:157059231-157060762	7	-	157059231	157059231	16724991	1	1531,	0,
#Deleted in new
chr1	157073256	157074703	chr1:157073256-157074703	7	+	157073256	157073256	16724991	1	1447,	0,
#Partially deleted in new
chr1	157092043	157099808	chr1:157092043-157099808	3	-	157092648	157099523	789624	5	1084,121,190,238,343,	0,5824,6662,7097,7422,
#Partially deleted in new
chr1	157121190	157138367	chr1:157121190-157138367	3	-	157124840	157136352	789624	5	4789,116,238,59,52,	0,12921,14280,15116,17125,
#Deleted in new
chr1	157128361	157128671	chr1:157128361-157128671	7	+	157128361	157128361	16724991	1	310,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	157133144	157138474	chr1:157133144-157138474	1	-	157134079	157136352	789624	4	1083,238,59,159,	0,2326,3162,5171,
#Deleted in new
chr1	157135091	157138335	chr1:157135091-157138335	0	-	157135091	157135091	8553170	3	617,59,20,	0,1215,3224,
#Partially deleted in new
chr1	157171115	157187405	chr1:157171115-157187405	7	+	157171115	157171115	16724991	4	40,155,294,445,	0,11744,14004,15845,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	157178156	157191963	chr1:157178156-157191963	5	+	157178156	157178156	16724991	4	87,393,294,5003,	0,4703,6963,8804,
#Partially deleted in new
chr1	157178170	157187081	chr1:157178170-157187081	5	+	157178170	157178170	16724991	4	73,393,294,121,	0,4689,6949,8790,
#Deleted in new
chr1	157203603	157205062	chr1:157203603-157205062	7	-	157203603	157203603	16724991	2	100,321,	0,1138,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	157232230	157237136	chr1:157232230-157237136	3	-	157232230	157232230	8553170	2	310,89,	0,4817,
#Deleted in new
chr1	157287702	157288053	chr1:157287702-157288053	3	-	157287702	157287702	8553170	2	84,72,	0,279,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	157513376	157552520	chr1:157513376-157552520	3	-	157515674	157552362	789624	17	2388,32,69,83,28,117,276,279,279,279,279,279,285,252,255,21,189,	0,2465,5052,5323,6366,7054,7640,10902,14240,21237,25709,29482,30885,31454,33566,36183,38955,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	157513376	157516073	chr1:157513376-157516073	0	-	157513376	157513376	8553170	2	2388,232,	0,2465,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	157513377	157522794	chr1:157513377-157522794	0	-	157513377	157513377	8553170	7	2387,32,69,83,28,131,1778,	0,2464,5051,5322,6365,7053,7639,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	157513377	157528669	chr1:157513377-157528669	0	-	157513377	157513377	8553170	9	2387,32,69,83,28,117,276,279,1053,	0,2464,5051,5322,6365,7053,7639,10901,14239,
#Partially deleted in new
chr1	157518428	157519076	chr1:157518428-157519076	0	-	157518428	157518428	8553170	2	69,377,	0,271,
#Partially deleted in new
chr1	157523810	157552455	chr1:157523810-157552455	1	-	157524237	157552362	789624	10	747,279,279,279,279,285,252,255,21,124,	0,3806,10803,15275,19048,20451,21020,23132,25749,28521,
#Partially deleted in new
chr1	157531963	157552455	chr1:157531963-157552455	1	-	157534515	157552362	789624	8	2929,279,279,285,252,255,21,124,	0,7122,10895,12298,12867,14979,17596,20368,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	157573748	157598080	chr1:157573748-157598080	3	-	157575523	157597944	789624	12	1862,32,69,83,28,114,288,285,255,255,21,167,	0,1950,4725,5021,6572,7782,12419,13527,14116,15455,22579,24165,
#Partially deleted in new
chr1	157574820	157589251	chr1:157574820-157589251	0	-	157574820	157574820	8553170	9	790,32,379,28,114,288,285,255,48,	0,878,3653,5500,6710,11347,12455,13044,14383,
#Partially deleted in new
chr1	157575568	157580537	chr1:157575568-157580537	0	-	157575568	157575568	8553170	5	42,32,69,83,217,	0,130,2905,3201,4752,
#Partially deleted in new
chr1	157629938	157630728	chr1:157629938-157630728	7	-	157629938	157629938	16724991	2	258,247,	0,543,
#Partially deleted in new
chr1	157636299	157640301	chr1:157636299-157640301	7	-	157636299	157636299	16724991	2	275,277,	0,3725,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	157674320	157676732	chr1:157674320-157676732	0	-	157674320	157674320	8553170	2	357,57,	0,2355,
#Partially deleted in new
chr1	157676480	157700738	chr1:157676480-157700738	1	-	157676711	157700489	789624	16	288,114,32,69,119,28,120,279,279,288,285,261,246,21,127,77,	0,2262,2461,4221,4500,6736,13317,13774,18848,19559,20659,21178,21903,23211,23978,24181,
#Partially deleted in new
chr1	157676480	157700730	chr1:157676480-157700730	0	-	157678709	157700489	789624	15	288,262,32,69,119,28,120,279,279,288,261,246,21,127,69,	0,2114,2461,4221,4500,6736,13317,13774,18848,19559,21178,21903,23211,23978,24181,
#Partially deleted in new
chr1	157676480	157700730	chr1:157676480-157700730	0	-	157676480	157676480	8553170	15	288,262,32,69,119,28,120,279,279,288,780,246,21,127,69,	0,2114,2461,4221,4500,6736,13317,13774,18848,19559,20659,21903,23211,23978,24181,
#Partially deleted in new
chr1	157676480	157700743	chr1:157676480-157700743	0	-	157678709	157700489	789624	16	288,262,32,69,119,28,120,279,279,288,285,261,246,21,127,82,	0,2114,2461,4221,4500,6736,13317,13774,18848,19559,20659,21178,21903,23211,23978,24181,
#Partially deleted in new
chr1	157676480	157700730	chr1:157676480-157700730	0	-	157678709	157700489	789624	16	288,262,32,69,119,28,120,279,297,288,285,261,246,21,127,69,	0,2114,2461,4221,4500,6736,13317,13774,18848,19559,20659,21178,21903,23211,23978,24181,
#Partially deleted in new
chr1	157676480	157700730	chr1:157676480-157700730	0	-	157676480	157676480	789624	16	288,262,32,69,119,28,120,279,279,288,190,261,246,21,127,69,	0,2114,2461,4221,4500,6736,13317,13774,18848,19559,20659,21178,21903,23211,23978,24181,
#Partially deleted in new
chr1	157676481	157700857	chr1:157676481-157700857	3	-	157678709	157700489	789624	15	2375,32,69,119,28,120,279,279,288,285,261,246,21,127,196,	0,2460,4220,4499,6735,13316,13773,18847,19558,20658,21177,21902,23210,23977,24180,
#Partially deleted in new
chr1	157678320	157698013	chr1:157678320-157698013	0	-	157678320	157678320	8553170	9	536,32,69,119,28,120,279,279,1974,	0,621,2381,2660,4896,11477,11934,17008,17719,
#Partially deleted in new
chr1	157678690	157689890	chr1:157678690-157689890	0	-	157678690	157678690	8553170	5	495,69,119,28,93,	0,2011,2290,4526,11107,
#Partially deleted in new
chr1	157691761	157696459	chr1:157691761-157696459	3	+	157691761	157691761	8553170	2	263,495,	0,4203,
#Deleted in new
chr1	157697167	157697919	chr1:157697167-157697919	0	-	157697167	157697167	8553170	2	127,261,	0,491,
#Deleted in new
chr1	157697215	157700745	chr1:157697215-157700745	0	-	157697215	157700489	789624	6	209,261,246,21,127,43,	0,443,1168,2476,3243,3487,
#Deleted in new
chr1	157709085	157709643	chr1:157709085-157709643	7	+	157709085	157709085	16724991	1	558,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	157724179	157725020	chr1:157724179-157725020	7	-	157724179	157724179	16724991	1	841,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	157745732	157777122	chr1:157745732-157777122	3	-	157746735	157777073	789624	12	1042,29,66,86,28,117,279,288,285,258,21,80,	0,1138,2820,3142,3917,21122,21498,22681,24133,24676,30042,31310,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	157745732	157770310	chr1:157745732-157770310	0	-	157745732	157745732	8553170	7	1042,29,66,86,28,117,3080,	0,1138,2820,3142,3917,21122,21498,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	157745734	157777132	chr1:157745734-157777132	1	-	157746735	157777073	789624	8	1040,29,86,28,117,258,21,90,	0,1136,3140,3915,21120,24674,30040,31308,
#Partially deleted in new
chr1	157766613	157767774	chr1:157766613-157767774	1	-	157766795	157767633	789624	2	358,544,	0,617,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	157769349	157777132	chr1:157769349-157777132	0	-	157769349	157769349	8553170	4	801,258,21,90,	0,1059,6425,7693,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	157794402	157801967	chr1:157794402-157801967	0	-	157794402	157794402	8553170	7	1768,32,62,83,28,117,53,	0,2698,3356,3758,5655,7058,7512,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	157794535	157820089	chr1:157794535-157820089	1	-	157796160	157820037	789624	10	1635,32,62,83,28,279,288,267,21,83,	0,2565,3223,3625,5522,7379,7841,9309,12566,25471,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	157794535	157804201	chr1:157794535-157804201	0	-	157794535	157794535	8553170	7	1635,29,72,83,28,750,357,	0,2565,3332,3625,5522,7379,9309,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	157794764	157820072	chr1:157794764-157820072	0	-	157794764	157794764	8553170	11	1406,32,72,83,28,131,248,50,267,21,66,	0,2336,3103,3396,5293,6696,7150,7850,9080,12337,25242,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	157794860	157820105	chr1:157794860-157820105	3	-	157796098	157820037	789624	11	1310,32,72,83,28,117,279,288,267,21,99,	0,2240,3007,3300,5197,6600,7054,7516,8984,12241,25146,
#Partially deleted in new
chr1	157795627	157797820	chr1:157795627-157797820	0	-	157795627	157795627	8553170	3	543,32,140,	0,1473,2053,
#Partially deleted in new
chr1	157795854	157820060	chr1:157795854-157820060	1	-	157796098	157820037	789624	11	316,29,72,83,28,117,279,288,267,21,54,	0,1246,2013,2306,4203,5606,6060,6522,7990,11247,24152,
#Partially deleted in new
chr1	157806647	157820091	chr1:157806647-157820091	0	-	157806647	157806647	8553170	2	475,85,	0,13359,
#Partially deleted in new
chr1	157830913	157841798	chr1:157830913-157841798	3	-	157831963	157841701	789624	6	1055,321,342,321,27,125,	0,2278,3493,4921,8470,10760,
#Deleted in new
chr1	157861196	157861460	chr1:157861196-157861460	7	+	157861196	157861196	16724991	1	264,	0,
#Partially deleted in new
chr1	157925064	157929862	chr1:157925064-157929862	5	+	157925064	157925064	16724991	3	280,280,334,	0,696,4464,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	157929530	157943196	chr1:157929530-157943196	4	+	157929530	157929530	16724991	2	261,533,	0,13133,
#Partially deleted in new
chr1	157993272	158096051	chr1:157993272-158096051	1	+	158076243	158095120	789624	13	460,150,150,106,149,128,127,101,199,108,140,78,1408,	0,82840,84718,94482,94733,95054,96229,96445,98085,100066,100350,101040,101371,
#Partially deleted in new
chr1	157993272	158100261	chr1:157993272-158100261	1	+	157993676	158095120	789624	13	456,158,151,106,149,128,127,101,199,108,140,78,5618,	0,91149,93323,94482,94733,95054,96229,96445,98085,100066,100350,101040,101371,
#Partially deleted in new
chr1	157993609	158095653	chr1:157993609-158095653	3	+	157993676	158095120	789624	15	119,150,150,158,151,106,149,128,127,101,199,108,140,78,1010,	0,82503,84381,90812,92986,94145,94396,94717,95892,96108,97748,99729,100013,100703,101034,
#Partially deleted in new
chr1	158025549	158031166	chr1:158025549-158031166	3	+	158025549	158025549	8553170	2	137,450,	0,5167,
#Partially deleted in new
chr1	158086679	158100262	chr1:158086679-158100262	1	+	158086691	158095120	789624	11	67,106,149,128,175,101,199,108,140,78,5619,	0,1075,1326,1647,2774,3038,4678,6659,6943,7633,7964,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	158132039	158146929	chr1:158132039-158146929	0	-	158132039	158132039	8553170	2	617,163,	0,14727,
#Partially deleted in new
chr1	158132043	158140639	chr1:158132043-158140639	3	-	158132043	158132043	789624	3	613,79,142,	0,1071,8454,
#Partially deleted in new
chr1	158132043	158140630	chr1:158132043-158140630	1	-	158132043	158132043	8553170	4	358,79,79,133,	0,534,1071,8454,
#Partially deleted in new
chr1	158175849	158177755	chr1:158175849-158177755	7	-	158175849	158175849	16724991	1	1906,	0,
#Deleted in new
chr1	158179946	158184896	chr1:158179946-158184896	3	+	158181101	158184150	0	7	216,344,267,279,279,100,768,	0,872,1508,2085,2931,3989,4182,
#Deleted in new
chr1	158195632	158196131	chr1:158195632-158196131	7	-	158195632	158195632	16724991	1	499,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	158197921	158203877	chr1:158197921-158203877	3	-	158197921	158197921	8553170	2	1914,85,	0,5871,
#Partially deleted in new
chr1	158254136	158258269	chr1:158254136-158258269	3	+	158254669	158257690	0	6	591,267,279,279,91,589,	0,947,1867,2649,3284,3544,
#Partially deleted in new
chr1	158266752	158267320	chr1:158266752-158267320	7	-	158266752	158266752	16724991	2	167,96,	0,472,
#Deleted in new
chr1	158289785	158293630	chr1:158289785-158293630	3	+	158290064	158293476	0	6	340,267,282,279,91,176,	0,1348,2298,2810,3426,3669,
#Deleted in new
chr1	158291269	158293617	chr1:158291269-158293617	0	+	158291269	158293606	789624	4	131,282,279,163,	0,814,1326,2185,
#Partially deleted in new
chr1	158327950	158331531	chr1:158327950-158331531	3	-	158328235	158331423	0	6	307,94,279,279,267,169,	0,970,1419,1901,2845,3412,
#Partially deleted in new
chr1	158327950	158331025	chr1:158327950-158331025	0	-	158328235	158331025	789624	5	307,94,114,279,230,	0,970,1584,1901,2845,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	158353695	158357553	chr1:158353695-158357553	1	+	158353988	158356896	0	5	351,270,279,94,826,	0,1604,2131,2802,3032,
#Deleted in new
chr1	158353749	158356948	chr1:158353749-158356948	3	+	158353988	158356896	0	6	297,297,270,279,94,221,	0,627,1550,2077,2748,2978,
#Deleted in new
chr1	158353843	158356896	chr1:158353843-158356896	1	+	158353988	158356896	0	4	203,279,94,169,	0,1983,2654,2884,
#Deleted in new
chr1	158353882	158356896	chr1:158353882-158356896	1	+	158353988	158356896	0	5	164,297,279,94,169,	0,494,1944,2615,2845,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	158353884	158357499	chr1:158353884-158357499	1	+	158353988	158356896	0	4	162,279,94,736,	0,1942,2613,2879,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	158353909	158357529	chr1:158353909-158357529	1	+	158353988	158356896	0	6	137,297,270,114,94,766,	0,467,1390,1917,2588,2854,
#Deleted in new
chr1	158353915	158357196	chr1:158353915-158357196	1	+	158353988	158356570	0	4	131,175,94,469,	0,1911,2582,2812,
#Deleted in new
chr1	158353988	158356896	chr1:158353988-158356896	1	+	158353988	158356896	0	4	58,114,94,169,	0,1838,2509,2739,
#Deleted in new
chr1	158353988	158356896	chr1:158353988-158356896	1	+	158353988	158356896	0	5	58,297,114,94,133,	0,388,1838,2509,2775,
#Deleted in new
chr1	158353988	158356896	chr1:158353988-158356896	1	+	158353988	158356896	0	5	58,297,279,94,133,	0,388,1838,2509,2775,
#Deleted in new
chr1	158353988	158356896	chr1:158353988-158356896	1	+	158353988	158356896	0	4	58,114,94,133,	0,1838,2509,2775,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	158353988	158357492	chr1:158353988-158357492	1	+	158353988	158356896	0	6	58,297,270,279,94,729,	0,388,1311,1838,2509,2775,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	158353988	158357522	chr1:158353988-158357522	1	+	158353988	158356570	0	6	58,297,270,175,94,795,	0,388,1311,1838,2509,2739,
#Deleted in new
chr1	158354179	158355338	chr1:158354179-158355338	0	+	158354179	158354179	8553170	2	86,39,	0,1120,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	158355893	158357497	chr1:158355893-158357497	0	+	158355893	158356570	789624	3	108,94,734,	0,604,870,
#Partially deleted in new
chr1	158398521	158399466	chr1:158398521-158399466	3	-	158398521	158399466	789624	1	945,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	158418209	158426237	chr1:158418209-158426237	3	-	158419927	158420866	789624	2	2718,305,	0,7723,
#Partially deleted in new
chr1	158419927	158420866	chr1:158419927-158420866	1	-	158419927	158420866	789624	1	939,	0,
#Partially deleted in new
chr1	158445067	158446014	chr1:158445067-158446014	7	-	158445067	158445067	16724991	1	947,	0,
#Partially deleted in new
chr1	158454197	158455273	chr1:158454197-158455273	7	+	158454197	158454197	16724991	1	1076,	0,
#Partially deleted in new
chr1	158461573	158470857	chr1:158461573-158470857	0	+	158461573	158461573	8553170	2	201,90,	0,9194,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	158461573	158468979	chr1:158461573-158468979	3	+	158465561	158466503	789624	2	201,3574,	0,3832,
#Partially deleted in new
chr1	158461717	158467458	chr1:158461717-158467458	1	+	158465561	158466503	789624	2	57,1908,	0,3833,
#Partially deleted in new
chr1	158461833	158467458	chr1:158461833-158467458	1	+	158465561	158466503	789624	2	71,2053,	0,3572,
#Partially deleted in new
chr1	158461833	158467458	chr1:158461833-158467458	1	+	158465561	158466503	789624	2	71,2050,	0,3575,
#Partially deleted in new
chr1	158465481	158466554	chr1:158465481-158466554	1	+	158465561	158466503	789624	1	1073,	0,
#Partially deleted in new
chr1	158472219	158480936	chr1:158472219-158480936	1	+	158472325	158480885	789624	2	133,999,	0,7718,
#Partially deleted in new
chr1	158474453	158494886	chr1:158474453-158494886	3	-	158474453	158474453	8553170	3	214,1898,485,	0,5451,19948,
#Partially deleted in new
chr1	158474455	158494717	chr1:158474455-158494717	0	-	158474455	158474455	8553170	3	212,153,63,	0,19946,20199,
#Deleted in new
chr1	158479877	158480885	chr1:158479877-158480885	3	+	158479877	158480885	789624	1	1008,	0,
#Deleted in new
chr1	158479910	158480885	chr1:158479910-158480885	1	+	158479910	158480885	789624	1	975,	0,
#Deleted in new
chr1	158491218	158492160	chr1:158491218-158492160	7	+	158491218	158491218	16724991	1	942,	0,
#Deleted in new
chr1	158514784	158515925	chr1:158514784-158515925	7	+	158514784	158514784	16724991	1	1141,	0,
#Partially deleted in new
chr1	158523671	158525838	chr1:158523671-158525838	7	+	158523671	158523671	16724991	1	2167,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	158544549	158554405	chr1:158544549-158554405	1	-	158547127	158548105	789624	2	3562,140,	0,9716,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	158544549	158554405	chr1:158544549-158554405	3	-	158547127	158548105	789624	2	4988,140,	0,9716,
#Deleted in new
chr1	158547127	158548105	chr1:158547127-158548105	1	-	158547127	158548105	789624	1	978,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	158560605	158570580	chr1:158560605-158570580	3	-	158562650	158563604	789624	3	3021,95,139,	0,6158,9836,
#Deleted in new
chr1	158562650	158563604	chr1:158562650-158563604	1	-	158562650	158563604	789624	1	954,	0,
#Deleted in new
chr1	158578918	158579899	chr1:158578918-158579899	3	-	158578918	158579899	789624	1	981,	0,
#Partially deleted in new
chr1	158605267	158612514	chr1:158605267-158612514	3	+	158606438	158607380	789624	2	134,6189,	0,1058,
#Deleted in new
chr1	158606438	158607380	chr1:158606438-158607380	1	+	158606438	158607380	789624	1	942,	0,
#Partially deleted in new
chr1	158610705	158686698	chr1:158610705-158686698	1	-	158611263	158686517	0	52	684,145,147,54,188,52,18,113,297,210,77,169,99,133,122,121,209,105,138,132,163,104,144,198,100,182,145,92,102,187,152,138,93,218,123,244,182,205,156,78,111,138,102,136,155,145,134,147,141,126,240,205,	0,2111,3015,3547,4510,6831,7333,8516,9464,12277,15440,16133,16919,23837,25207,25935,27327,28876,29164,31705,32108,32616,33547,34482,34789,36833,37803,39150,40661,41761,42568,43905,45858,46771,50581,51996,55610,57152,58702,59003,60637,61353,63623,63834,65435,66984,67695,69877,70821,72665,74402,75788,
#Partially deleted in new
chr1	158610705	158686715	chr1:158610705-158686715	3	-	158611263	158686517	0	52	684,145,147,54,188,52,18,113,297,210,77,169,99,133,122,121,209,105,138,132,163,104,144,198,100,182,145,92,102,187,152,138,93,218,123,244,182,205,156,78,111,138,102,136,155,145,134,147,141,126,240,222,	0,2111,3015,3547,4510,6831,7333,8516,9464,12277,15440,16133,16919,23837,25207,25935,27327,28876,29164,31705,32108,32616,33547,34482,34789,36833,37803,39150,40661,41761,42568,43905,45858,46771,50581,51996,55610,57152,58702,59003,60637,61353,63623,63834,65435,66984,67695,69877,70821,72665,74402,75788,
#Deleted in new
chr1	158611207	158612025	chr1:158611207-158612025	0	-	158611207	158611207	8553170	2	182,240,	0,578,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	158612748	158614535	chr1:158612748-158614535	0	-	158612748	158612748	8553170	3	213,147,283,	0,972,1504,
#Partially deleted in new
chr1	158612782	158617568	chr1:158612782-158617568	0	-	158612782	158612782	8553170	5	179,147,54,188,32,	0,938,1470,2433,4754,
#Deleted in new
chr1	158614747	158618101	chr1:158614747-158618101	0	-	158614747	158614747	8553170	3	656,52,63,	0,2789,3291,
#Deleted in new
chr1	158619185	158620789	chr1:158619185-158620789	0	-	158619185	158619185	8553170	2	149,620,	0,984,
#Partially deleted in new
chr1	158622718	158634653	chr1:158622718-158634653	0	-	158622718	158622718	8553170	5	474,77,169,99,111,	0,3427,4120,4906,11824,
#Partially deleted in new
chr1	158639228	158642532	chr1:158639228-158642532	0	-	158639228	158639228	8553170	3	458,138,122,	0,641,3182,
#Partially deleted in new
chr1	158656630	158661473	chr1:158656630-158661473	0	-	158656630	158656630	8553170	3	26,218,187,	0,846,4656,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	158694538	158695509	chr1:158694538-158695509	7	-	158694538	158694538	16724991	1	971,	0,
#Deleted in new
chr1	158699677	158700652	chr1:158699677-158700652	3	-	158699677	158700652	789624	1	975,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	158716326	158720720	chr1:158716326-158720720	3	-	158717167	158718115	789624	2	1806,38,	0,4356,
#Partially deleted in new
chr1	158717167	158718163	chr1:158717167-158718163	1	-	158717167	158718163	789624	1	996,	0,
#Partially deleted in new
chr1	158724112	158725067	chr1:158724112-158725067	7	-	158724112	158724112	16724991	1	955,	0,
#Partially deleted in new
chr1	158742145	158743415	chr1:158742145-158743415	7	-	158742145	158742145	16724991	2	102,843,	0,427,
#Partially deleted in new
chr1	158747813	158772195	chr1:158747813-158772195	0	-	158747813	158747813	8553170	2	86,175,	0,24207,
#Partially deleted in new
chr1	158754719	158755891	chr1:158754719-158755891	3	+	158754815	158755847	789624	1	1172,	0,
#Partially deleted in new
chr1	158754719	158755891	chr1:158754719-158755891	1	+	158754887	158755847	789624	1	1172,	0,
#Partially deleted in new
chr1	158764235	158772195	chr1:158764235-158772195	3	-	158765743	158766682	789624	2	2465,175,	0,7785,
#Deleted in new
chr1	158765675	158766702	chr1:158765675-158766702	1	-	158765743	158766682	789624	1	1027,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	158774221	158781204	chr1:158774221-158781204	3	-	158776681	158777635	789624	2	3420,35,	0,6948,
#Deleted in new
chr1	158776681	158777635	chr1:158776681-158777635	1	-	158776681	158777635	789624	1	954,	0,
#Deleted in new
chr1	158796013	158796213	chr1:158796013-158796213	7	+	158796013	158796013	16724991	1	200,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	158808398	158809335	chr1:158808398-158809335	7	-	158808398	158808398	16724991	1	937,	0,
#Partially deleted in new
chr1	158831316	158849504	chr1:158831316-158849504	3	+	158842153	158849237	0	7	241,285,137,168,417,189,315,	0,10817,11962,12638,14270,16411,17873,
#Partially deleted in new
chr1	158831350	158842723	chr1:158831350-158842723	0	+	158831350	158831350	8553170	2	207,590,	0,10783,
#Deleted in new
chr1	158845900	158849506	chr1:158845900-158849506	0	+	158845900	158849237	789624	3	103,162,317,	0,1827,3289,
#Partially deleted in new
chr1	158878745	158883500	chr1:158878745-158883500	7	+	158878745	158878745	16724991	4	263,146,167,147,	0,1298,1984,4608,
#Partially deleted in new
chr1	158930795	158939120	chr1:158930795-158939120	0	+	158936910	158939120	789624	5	193,106,285,146,41,	0,875,6095,7601,8284,
#Partially deleted in new
chr1	158931551	158977054	chr1:158931551-158977054	3	+	158936910	158973766	789624	9	225,285,146,168,423,189,168,125,354,	0,5339,6845,7528,10425,12238,13323,42095,45149,
#Partially deleted in new
chr1	158931558	158976728	chr1:158931558-158976728	1	+	158936910	158973766	789624	9	218,285,119,168,423,189,168,125,28,	0,5332,6865,7521,10418,12231,13316,42088,45142,
#Partially deleted in new
chr1	158931559	158976728	chr1:158931559-158976728	1	+	158936910	158976727	789624	8	217,285,119,168,423,189,168,28,	0,5331,6864,7520,10417,12230,13315,45141,
#Partially deleted in new
chr1	158931559	158976728	chr1:158931559-158976728	1	+	158936910	158976727	789624	8	217,285,146,168,423,189,168,28,	0,5331,6837,7520,10417,12230,13315,45141,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	158931567	158940256	chr1:158931567-158940256	1	+	158936910	158939561	789624	5	209,285,146,168,854,	0,5323,6829,7512,7835,
#Deleted in new
chr1	158941976	158945391	chr1:158941976-158945391	0	+	158941976	158941976	8553170	3	423,189,517,	0,1813,2898,
#Partially deleted in new
chr1	158999967	159014929	chr1:158999967-159014929	0	+	159014680	159014929	789624	3	428,159,269,	0,10035,14693,
#Partially deleted in new
chr1	159005961	159016653	chr1:159005961-159016653	0	+	159014680	159016653	789624	5	80,159,285,116,121,	0,4041,8699,9910,10571,
#Partially deleted in new
chr1	159008994	159016692	chr1:159008994-159016692	0	+	159014680	159016692	789624	5	231,159,285,116,160,	0,1008,5666,6877,7538,
#Partially deleted in new
chr1	159009891	159055153	chr1:159009891-159055153	1	+	159045425	159054901	789624	12	270,285,116,168,423,189,168,168,420,31,161,333,	0,4769,5980,6641,8337,10449,22632,35405,41787,42428,43672,44929,
#Partially deleted in new
chr1	159009891	159055155	chr1:159009891-159055155	3	+	159014680	159054901	0	11	270,285,116,168,423,189,168,168,420,192,335,	0,4769,5980,6641,8337,10449,22632,35405,41787,43641,44929,
#Partially deleted in new
chr1	159009917	159055151	chr1:159009917-159055151	1	+	159014680	159054901	0	11	244,285,116,168,423,189,168,168,420,192,331,	0,4743,5954,6615,8311,10423,22606,39514,41761,43615,44903,
#Partially deleted in new
chr1	159009917	159055151	chr1:159009917-159055151	0	+	159009917	159009917	8553170	10	244,285,116,168,423,189,168,168,2046,331,	0,4743,5954,6615,8311,10423,22606,39514,41761,44903,
#Partially deleted in new
chr1	159009917	159055151	chr1:159009917-159055151	0	+	159009917	159009917	8553170	10	244,285,116,168,423,189,168,168,2046,331,	0,4743,5954,6615,8311,10423,22606,35379,41761,44903,
#Partially deleted in new
chr1	159009926	159055155	chr1:159009926-159055155	1	+	159014680	159054901	0	12	235,285,116,168,423,189,168,168,168,420,192,335,	0,4734,5945,6606,8302,10414,22597,35370,39505,41752,43606,44894,
#Partially deleted in new
chr1	159010009	159055148	chr1:159010009-159055148	1	+	159014680	159054901	0	11	152,285,116,423,189,168,168,168,420,192,328,	0,4651,5862,8219,10331,22514,35287,39422,41669,43523,44811,
#Partially deleted in new
chr1	159014680	159055124	chr1:159014680-159055124	1	+	159014680	159054901	0	9	265,116,168,423,189,168,420,192,304,	0,1191,1852,3548,5660,17843,36998,38852,40140,
#Partially deleted in new
chr1	159015672	159020529	chr1:159015672-159020529	0	+	159016625	159020529	789624	4	315,168,423,189,	0,860,2556,4668,
#Partially deleted in new
chr1	159015672	159018376	chr1:159015672-159018376	0	+	159016625	159018376	789624	3	315,83,148,	0,945,2556,
#Partially deleted in new
chr1	159032503	159055128	chr1:159032503-159055128	0	+	159032503	159032503	8553170	4	188,420,192,308,	0,19175,21029,22317,
#Partially deleted in new
chr1	159062483	159076901	chr1:159062483-159076901	3	-	159062691	159073499	0	6	235,189,420,134,282,269,	0,1002,3426,6084,10754,14149,
#Partially deleted in new
chr1	159063531	159073265	chr1:159063531-159073265	0	-	159063531	159063531	8553170	5	143,85,118,134,28,	0,2378,2680,5036,9706,
#Partially deleted in new
chr1	159063578	159140508	chr1:159063578-159140508	0	-	159063578	159066314	789624	3	96,420,78,	0,2331,76852,
#Partially deleted in new
chr1	159081132	159081795	chr1:159081132-159081795	7	-	159081132	159081132	16724991	1	663,	0,
#Partially deleted in new
chr1	159171608	159202012	chr1:159171608-159202012	3	+	159171765	159200922	0	10	245,102,141,153,138,171,91,170,126,1209,	0,18162,20327,20969,21814,22261,24755,25282,28142,29195,
#Partially deleted in new
chr1	159171608	159203313	chr1:159171608-159203313	1	+	159171765	159200922	0	9	245,141,153,138,171,91,170,126,2510,	0,20327,20969,21814,22261,24755,25282,28142,29195,
#Partially deleted in new
chr1	159171758	159196950	chr1:159171758-159196950	0	+	159171765	159196950	789624	7	95,141,153,138,33,91,60,	0,20177,20819,21664,22111,24605,25132,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	159178472	159178559	chr1:159178472-159178559	7	+	159178472	159178472	16724991	1	87,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	159194324	159202512	chr1:159194324-159202512	1	-	159194324	159194324	789624	4	3897,74,810,263,	0,5461,6487,7925,
#Deleted in new
chr1	159201305	159207973	chr1:159201305-159207973	2	-	159201305	159201305	8553170	2	316,164,	0,6504,
#Deleted in new
chr1	159203306	159206498	chr1:159203306-159206498	3	+	159204959	159206450	0	3	164,700,1038,	0,974,2154,
#Deleted in new
chr1	159204012	159206500	chr1:159204012-159206500	1	+	159204959	159206450	0	2	968,1040,	0,1448,
#Deleted in new
chr1	159204918	159205898	chr1:159204918-159205898	0	+	159205433	159205898	789624	2	62,488,	0,492,
#Deleted in new
chr1	159205258	159206500	chr1:159205258-159206500	1	+	159205433	159206450	0	1	1242,	0,
#Partially deleted in new
chr1	159276502	159277111	chr1:159276502-159277111	7	+	159276502	159276502	16724991	1	609,	0,
#Partially deleted in new
chr1	159279040	159280001	chr1:159279040-159280001	7	-	159279040	159279040	16724991	1	961,	0,
#Partially deleted in new
chr1	159289713	159308224	chr1:159289713-159308224	3	+	159302364	159307932	0	6	40,114,21,255,258,477,	0,12592,13140,14214,16274,18034,
#Partially deleted in new
chr1	159302335	159307993	chr1:159302335-159307993	1	+	159302364	159307932	789624	5	84,21,156,258,246,	0,518,1691,3652,5412,
#Partially deleted in new
chr1	159313669	159314659	chr1:159313669-159314659	3	-	159313669	159314659	789624	1	990,	0,
#Partially deleted in new
chr1	159313719	159314659	chr1:159313719-159314659	1	-	159313719	159314659	8553170	1	940,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	159346165	159469068	chr1:159346165-159469068	3	-	159346165	159346165	8553170	4	524,126,186,227,	0,15608,18158,122676,
#Partially deleted in new
chr1	159351092	159352026	chr1:159351092-159352026	7	+	159351092	159351092	16724991	1	934,	0,
#Partially deleted in new
chr1	159366160	159367089	chr1:159366160-159367089	7	+	159366160	159366160	16724991	1	929,	0,
#Partially deleted in new
chr1	159405422	159406409	chr1:159405422-159406409	7	-	159405422	159405422	16724991	1	987,	0,
#Deleted in new
chr1	159432203	159433138	chr1:159432203-159433138	3	+	159432203	159433138	8553170	1	935,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	159437844	159443078	chr1:159437844-159443078	3	+	159439791	159440721	789624	2	200,3303,	0,1931,
#Deleted in new
chr1	159439721	159440811	chr1:159439721-159440811	1	+	159439791	159440721	789624	1	1090,	0,
#Deleted in new
chr1	159439721	159440810	chr1:159439721-159440810	1	+	159439758	159440721	789624	1	1089,	0,
#Partially deleted in new
chr1	159466320	159483376	chr1:159466320-159483376	3	+	159466320	159466320	8553170	3	303,77,473,	0,1759,16583,
#Deleted in new
chr1	159535077	159536007	chr1:159535077-159536007	3	-	159535077	159536007	789624	1	930,	0,
#Deleted in new
chr1	159557367	159558200	chr1:159557367-159558200	7	+	159557367	159557367	16724991	2	63,603,	0,230,
#Deleted in new
chr1	159581619	159582648	chr1:159581619-159582648	7	-	159581619	159581619	16724991	1	1029,	0,
#Deleted in new
chr1	159587824	159588865	chr1:159587824-159588865	3	+	159587921	159588708	0	2	161,765,	0,276,
#Deleted in new
chr1	159598297	159599227	chr1:159598297-159599227	7	+	159598297	159598297	16724991	1	930,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	159649150	159649620	chr1:159649150-159649620	7	+	159649150	159649150	16724991	1	470,	0,
#Partially deleted in new
chr1	159704982	159705607	chr1:159704982-159705607	7	-	159704982	159704982	16724991	1	625,	0,
#Partially deleted in new
chr1	159712288	159714589	chr1:159712288-159714589	3	-	159713524	159714485	0	2	1850,165,	0,2136,
#Partially deleted in new
chr1	159712290	159713767	chr1:159712290-159713767	0	-	159712290	159712290	8553170	2	504,265,	0,1212,
#Partially deleted in new
chr1	159712292	159714589	chr1:159712292-159714589	1	-	159713524	159713665	789624	3	502,470,91,	0,1210,2206,
#Partially deleted in new
chr1	159712409	159714589	chr1:159712409-159714589	1	-	159713524	159714485	0	4	385,101,136,165,	0,1093,1593,2015,
#Partially deleted in new
chr1	159712503	159714589	chr1:159712503-159714589	1	-	159713524	159714485	789624	4	77,138,132,165,	0,999,1503,1921,
#Partially deleted in new
chr1	159712534	159714080	chr1:159712534-159714080	0	-	159712534	159712534	8553170	2	260,74,	0,1472,
#Partially deleted in new
chr1	159712562	159714589	chr1:159712562-159714589	1	-	159713524	159714485	789624	4	232,138,132,165,	0,940,1444,1862,
#Partially deleted in new
chr1	159759169	159759589	chr1:159759169-159759589	7	+	159759169	159759169	16724991	1	420,	0,
#Partially deleted in new
chr1	159780931	159782543	chr1:159780931-159782543	3	+	159781100	159782338	0	3	69,269,391,	0,167,1221,
#Partially deleted in new
chr1	159780959	159782543	chr1:159780959-159782543	1	+	159781100	159782338	0	3	34,269,391,	0,139,1193,
#Partially deleted in new
chr1	159781002	159782543	chr1:159781002-159782543	1	+	159781100	159782338	0	2	365,391,	0,1150,
#Partially deleted in new
chr1	159800510	159809279	chr1:159800510-159809279	0	+	159800510	159800510	8553170	3	103,21,1102,	0,6085,7667,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	159800511	159816251	chr1:159800511-159816251	1	+	159800597	159815582	789624	11	102,36,21,267,285,282,123,66,72,32,711,	0,1908,6084,7666,8449,8890,9582,12977,13709,14916,15029,
#Partially deleted in new
chr1	159800511	159809422	chr1:159800511-159809422	0	+	159800597	159809422	789624	6	102,21,267,100,49,21,	0,6084,7666,8449,8685,8890,
#Partially deleted in new
chr1	159800545	159808648	chr1:159800545-159808648	0	+	159800545	159800545	8553170	4	68,154,21,471,	0,1756,6050,7632,
#Partially deleted in new
chr1	159802416	159815802	chr1:159802416-159815802	1	+	159802424	159815582	789624	9	39,21,267,285,282,123,66,72,267,	0,4179,5761,6544,6985,7677,11072,11804,13119,
#Partially deleted in new
chr1	159802423	159815661	chr1:159802423-159815661	3	+	159802424	159815661	789624	10	32,21,267,285,282,123,66,72,32,126,	0,4172,5754,6537,6978,7670,11065,11797,13004,13112,
#Partially deleted in new
chr1	159802423	159815592	chr1:159802423-159815592	1	+	159802424	159815582	789624	9	32,21,267,282,123,66,72,32,52,	0,4172,5754,6978,7670,11065,11797,13004,13117,
#Partially deleted in new
chr1	159826749	159837249	chr1:159826749-159837249	3	+	159826898	159835260	789624	5	189,327,306,108,2066,	0,3116,6126,6512,8434,
#Partially deleted in new
chr1	159826810	159835679	chr1:159826810-159835679	1	+	159826898	159835260	789624	4	128,306,108,496,	0,6065,6451,8373,
#Deleted in new
chr1	159830007	159837249	chr1:159830007-159837249	0	+	159830007	159830007	8553170	4	185,306,108,165,	0,2868,3254,7077,
#Deleted in new
chr1	159833004	159837249	chr1:159833004-159837249	0	+	159833004	159833004	8553170	4	177,108,126,165,	0,257,3665,4080,
#Partially deleted in new
chr1	159834473	159855347	chr1:159834473-159855347	0	-	159834473	159834473	789624	6	1682,111,156,110,270,172,	0,3443,6237,6652,20283,20702,
#Partially deleted in new
chr1	159834494	159854916	chr1:159834494-159854916	3	-	159834494	159834494	8553170	6	727,280,111,156,110,160,	0,1381,3422,6216,6631,20262,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	159834501	159873053	chr1:159834501-159873053	0	-	159858848	159873053	789624	9	6365,110,270,199,120,222,202,179,110,	0,6624,20255,21381,22022,23243,23588,24232,38442,
#Partially deleted in new
chr1	159835349	159854903	chr1:159835349-159854903	0	-	159835349	159835349	8553170	3	806,111,147,	0,2567,19407,
#Partially deleted in new
chr1	159837917	159855237	chr1:159837917-159855237	1	-	159837917	159837917	8553170	5	110,156,110,270,62,	0,2793,3208,16839,17258,
#Deleted in new
chr1	159851905	159851972	chr1:159851905-159851972	3	-	159851905	159851905	8553170	1	67,	0,
#Partially deleted in new
chr1	159854315	159862657	chr1:159854315-159862657	3	-	159854752	159862521	789624	7	711,199,120,222,202,179,185,	0,1567,2208,3429,3774,4418,8157,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	159854869	159867685	chr1:159854869-159867685	3	+	159854869	159854869	8553170	4	99,229,199,6607,	0,1026,5776,6209,
#Partially deleted in new
chr1	159857931	159873014	chr1:159857931-159873014	2	-	159858176	159873014	789624	3	35,202,71,	0,158,15012,
#Partially deleted in new
chr1	159857931	159873014	chr1:159857931-159873014	0	-	159857931	159857931	8553170	3	360,179,71,	0,802,15012,
#Partially deleted in new
chr1	159857931	159873014	chr1:159857931-159873014	0	-	159857931	159857931	8553170	2	360,71,	0,15012,
#Partially deleted in new
chr1	159857931	159873014	chr1:159857931-159873014	1	-	159858848	159873014	789624	4	35,123,179,71,	0,237,802,15012,
#Partially deleted in new
chr1	159872363	159900163	chr1:159872363-159900163	3	-	159872484	159900098	789624	12	200,225,194,114,147,130,179,171,145,143,126,68,	0,580,4192,4985,8190,12072,14147,15477,15988,18116,20816,27732,
#Partially deleted in new
chr1	159872363	159900125	chr1:159872363-159900125	0	-	159876651	159900098	789624	12	200,225,234,114,147,130,179,171,145,143,126,30,	0,580,4192,4985,8190,12072,14147,15477,15988,18116,20816,27732,
#Deleted in new
chr1	159872363	159873414	chr1:159872363-159873414	0	-	159872363	159872363	8553170	2	200,471,	0,580,
#Partially deleted in new
chr1	159872365	159898269	chr1:159872365-159898269	1	-	159872484	159890496	789624	12	198,225,194,114,147,130,179,171,145,143,126,204,	0,578,4190,4983,8188,12070,14145,15475,15986,18114,20814,25700,
#Partially deleted in new
chr1	159876262	159880700	chr1:159876262-159880700	0	-	159876262	159876262	8553170	3	487,114,147,	0,1086,4291,
#Partially deleted in new
chr1	159886598	159900112	chr1:159886598-159900112	0	-	159886598	159890496	789624	7	91,171,145,143,126,203,17,	0,1242,1753,3881,6581,11467,13497,
#Deleted in new
chr1	159899978	159900079	chr1:159899978-159900079	3	-	159899978	159899978	5263520	1	101,	0,
#Deleted in new
chr1	159910093	159910554	chr1:159910093-159910554	3	-	159910093	159910093	8553170	1	461,	0,
#Partially deleted in new
chr1	159918106	159923717	chr1:159918106-159923717	1	-	159918799	159923470	0	5	835,103,175,208,282,	0,1167,1554,2223,5329,
#Partially deleted in new
chr1	159918106	159925732	chr1:159918106-159925732	3	-	159918799	159920509	0	5	835,103,175,208,283,	0,1167,1554,2223,7343,
#Partially deleted in new
chr1	159918750	159925491	chr1:159918750-159925491	0	-	159918750	159918750	8553170	4	626,175,208,42,	0,910,1579,6699,
#Partially deleted in new
chr1	159918776	159924551	chr1:159918776-159924551	1	-	159918799	159920509	0	5	165,103,175,208,58,	0,497,884,1553,5717,
#Partially deleted in new
chr1	159918837	159925229	chr1:159918837-159925229	0	-	159918837	159920509	789624	5	104,103,175,208,211,	0,436,823,1492,6181,
#Partially deleted in new
chr1	159927038	159945596	chr1:159927038-159945596	1	-	159927344	159943454	0	21	488,128,861,43,177,85,251,176,124,151,117,141,95,146,142,118,155,153,189,232,24,	0,721,1119,2312,2599,2852,3150,3653,4099,4414,4773,5473,7151,7386,7642,9360,9715,10647,15924,16358,18534,
#Partially deleted in new
chr1	159927038	159945596	chr1:159927038-159945596	3	-	159927344	159943454	0	21	488,128,861,43,177,85,251,176,124,151,117,141,143,146,142,118,155,153,189,232,24,	0,721,1119,2312,2599,2852,3150,3653,4099,4414,4773,5473,7151,7386,7642,9360,9715,10647,15924,16358,18534,
#Partially deleted in new
chr1	159927038	159945593	chr1:159927038-159945593	0	-	159927038	159927038	8553170	20	488,128,861,43,148,85,251,176,151,117,141,143,146,142,118,155,153,189,232,21,	0,721,1119,2312,2599,2852,3150,3653,4414,4773,5473,7151,7386,7642,9360,9715,10647,15924,16358,18534,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	159927038	159933934	chr1:159927038-159933934	0	-	159927038	159927038	8553170	10	488,128,1236,177,85,251,176,124,117,1423,	0,721,1119,2599,2852,3150,3653,4099,4773,5473,
#Deleted in new
chr1	159927038	159932469	chr1:159927038-159932469	0	-	159927038	159927038	8553170	9	488,128,861,43,177,549,176,124,1017,	0,721,1119,2312,2599,2852,3653,4099,4414,
#Partially deleted in new
chr1	159927041	159945604	chr1:159927041-159945604	1	-	159927344	159943454	789624	14	485,128,499,100,141,143,146,142,118,155,153,189,232,32,	0,718,1116,4787,5470,7148,7383,7639,9357,9712,10644,15921,16355,18531,
#Deleted in new
chr1	159951491	159954220	chr1:159951491-159954220	1	-	159951660	159954137	789624	3	375,345,129,	0,1817,2600,
#Deleted in new
chr1	159951491	159954254	chr1:159951491-159954254	3	-	159951660	159954137	789624	4	375,273,345,163,	0,770,1817,2600,
#Deleted in new
chr1	159951491	159953492	chr1:159951491-159953492	0	-	159951491	159951491	8553170	3	375,273,48,	0,770,1953,
#Deleted in new
chr1	159951491	159954184	chr1:159951491-159954184	0	-	159951491	159951491	8553170	3	375,209,93,	0,1953,2600,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	159961217	159979061	chr1:159961217-159979061	1	+	159961217	159961217	8553170	4	188,147,469,462,	0,4281,15426,17382,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	159961223	159979061	chr1:159961223-159979061	0	+	159961223	159961223	789624	3	182,469,462,	0,15420,17376,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	159961298	159984750	chr1:159961298-159984750	3	+	159961298	159961298	8553170	3	107,75,1814,	0,19263,21638,
#Deleted in new
chr1	159972547	159974064	chr1:159972547-159974064	7	-	159972547	159972547	16724991	3	293,285,267,	0,449,1250,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	159998650	160070136	chr1:159998650-160070136	1	-	159999457	160042532	789624	4	844,100,487,115,	0,41851,43395,71371,
#Partially deleted in new
chr1	159998840	160070119	chr1:159998840-160070119	1	-	159999468	160042532	789624	3	654,487,98,	0,43205,71181,
#Partially deleted in new
chr1	159999153	160041957	chr1:159999153-160041957	0	-	160040532	160041957	789624	3	341,100,124,	0,41348,42680,
#Partially deleted in new
chr1	159999295	160042504	chr1:159999295-160042504	0	-	159999419	160042504	789624	2	199,671,	0,42538,
#Deleted in new
chr1	160020299	160020727	chr1:160020299-160020727	7	+	160020299	160020299	16724991	1	428,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	160024952	160031991	chr1:160024952-160031991	3	-	160030467	160031739	789624	1	7039,	0,
#Partially deleted in new
chr1	160037466	160070483	chr1:160037466-160070483	3	-	160041392	160042532	789624	2	5066,462,	0,32555,
#Partially deleted in new
chr1	160037466	160070160	chr1:160037466-160070160	1	-	160041392	160042532	789624	2	5066,139,	0,32555,
#Partially deleted in new
chr1	160038258	160070115	chr1:160038258-160070115	0	-	160038258	160038258	8553170	2	1090,94,	0,31763,
#Deleted in new
chr1	160038260	160042254	chr1:160038260-160042254	0	-	160041392	160042254	789624	2	2341,919,	0,3075,
#Deleted in new
chr1	160038302	160042502	chr1:160038302-160042502	0	-	160040532	160042502	789624	2	2299,669,	0,3531,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	160038332	160070106	chr1:160038332-160070106	1	-	160041392	160042532	789624	3	4200,66,85,	0,6423,31689,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	160038852	160068048	chr1:160038852-160068048	1	-	160041392	160042532	789624	3	3680,66,137,	0,5903,29059,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	160062487	160079821	chr1:160062487-160079821	3	+	160062487	160062487	8553170	5	143,101,115,48,238,	0,1001,2248,2496,17096,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	160081569	160090563	chr1:160081569-160090563	3	+	160084030	160087817	789624	3	128,964,3078,	0,2347,5916,
#Deleted in new
chr1	160091339	160098689	chr1:160091339-160098689	1	-	160091822	160098472	789624	7	269,131,414,408,462,378,281,	0,468,942,1584,2370,3529,7069,
#Deleted in new
chr1	160091339	160098689	chr1:160091339-160098689	1	-	160091822	160098472	789624	7	292,131,414,408,462,378,281,	0,468,942,1584,2370,3529,7069,
#Deleted in new
chr1	160091349	160098828	chr1:160091349-160098828	3	-	160091822	160098472	789624	8	259,131,414,408,462,378,109,30,	0,458,932,1574,2360,3519,7059,7449,
#Deleted in new
chr1	160093709	160098943	chr1:160093709-160098943	0	-	160093709	160098472	789624	4	462,378,109,110,	0,1159,4699,5124,
#Deleted in new
chr1	160093759	160095332	chr1:160093759-160095332	0	-	160093759	160093759	8553170	2	412,464,	0,1109,
#Partially deleted in new
chr1	160115758	160137202	chr1:160115758-160137202	0	+	160115758	160115758	8553170	20	115,105,60,204,114,135,118,269,199,110,135,190,176,137,151,169,155,124,146,302,	0,5147,5433,7454,8184,8537,9377,11793,12893,13221,13507,14343,14663,18725,19386,19675,20080,20488,20811,21142,
#Partially deleted in new
chr1	160115762	160121275	chr1:160115762-160121275	0	+	160115762	160115762	8553170	2	111,370,	0,5143,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr1	160115772	160143591	chr1:160115772-160143591	3	+	160115861	160141322	789624	23	101,105,60,204,114,135,118,269,199,110,135,190,176,137,151,169,155,124,146,131,102,92,2298,	0,5133,5419,7440,8170,8523,9363,11779,12879,13207,13493,14329,14649,18711,19372,19661,20066,20474,20797,21128,23867,24120,25521,
#Partially deleted in new
chr1	160115776	160141545	chr1:160115776-160141545	1	+	160115861	160141322	789624	23	97,105,60,204,114,135,118,269,199,110,135,190,176,137,151,169,155,124,146,131,102,59,252,	0,5129,5415,7436,8166,8519,9359,11775,12875,13203,13489,14325,14645,18707,19368,19657,20062,20470,20793,21124,23863,24149,25517,
#Deleted in new
chr1	160123957	160125542	chr1:160123957-160125542	0	+	160123957	160123957	8553170	3	99,135,407,	0,338,1178,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	160127671	160143591	chr1:160127671-160143591	0	+	160127671	160141322	789624	16	149,199,110,135,190,176,137,151,169,155,124,95,131,102,92,2298,	0,980,1308,1594,2430,2750,6812,7473,7762,8167,8575,8949,9229,11968,12221,13622,
#Partially deleted in new
chr1	160136670	160140058	chr1:160136670-160140058	0	+	160136670	160136670	8553170	4	45,131,102,166,	0,230,2969,3222,
#Partially deleted in new
chr1	160139958	160141777	chr1:160139958-160141777	0	+	160139958	160139958	8553170	3	26,124,484,	0,692,1335,
#Partially deleted in new
chr1	160151569	160186977	chr1:160151569-160186977	3	+	160152040	160186699	789624	22	618,60,204,114,135,118,269,199,110,135,190,173,137,151,169,155,124,146,131,102,92,307,	0,1595,3475,4475,7432,7839,12586,14958,15398,15708,19681,20015,22011,22541,23009,24522,24909,25949,30114,30360,34706,35101,
#Partially deleted in new
chr1	160151585	160186977	chr1:160151585-160186977	0	+	160152040	160171296	789624	22	602,60,204,114,135,118,269,199,110,152,190,173,137,151,169,155,84,146,131,102,92,307,	0,1579,3459,4459,7416,7823,12570,14942,15382,15692,19665,19999,21995,22525,22993,24506,24893,25933,30098,30344,34690,35085,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	160166527	160186977	chr1:160166527-160186977	0	+	160166527	160166527	8553170	15	199,110,152,1768,173,137,151,169,155,124,146,131,102,92,307,	0,440,750,3145,5057,7053,7583,8051,9564,9951,10991,15156,15402,19748,20143,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	160171403	160183428	chr1:160171403-160183428	0	+	160171403	160171403	8553170	11	37,173,137,151,169,155,124,146,131,102,737,	0,181,2177,2707,3175,4688,5075,6115,10280,10526,11288,
#Partially deleted in new
chr1	160177410	160186977	chr1:160177410-160186977	1	+	160177520	160186699	789624	5	254,131,102,92,307,	0,4273,4519,8865,9260,
#Partially deleted in new
chr1	160190555	160201886	chr1:160190555-160201886	3	+	160190751	160201376	0	11	475,85,101,112,74,131,46,55,101,75,642,	0,2246,3191,4456,4905,5341,7013,8121,8397,9295,10689,
#Partially deleted in new
chr1	160192637	160199053	chr1:160192637-160199053	0	+	160192637	160192637	8553170	8	249,101,112,74,131,46,55,101,	0,1109,2374,2823,3259,4931,6039,6315,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	160198209	160201493	chr1:160198209-160201493	1	+	160198685	160201376	789624	5	115,55,101,75,249,	0,467,743,1641,3035,
#Partially deleted in new
chr1	160202198	160208869	chr1:160202198-160208869	3	-	160202198	160202198	789624	5	318,64,1039,131,26,	0,2872,3139,6058,6645,
#Deleted in new
chr1	160205336	160215376	chr1:160205336-160215376	3	+	160211544	160213486	0	4	186,174,156,1955,	0,6206,7773,8085,
#Deleted in new
chr1	160205379	160214035	chr1:160205379-160214035	1	+	160211544	160213486	789624	4	143,108,156,614,	0,6163,7730,8042,
#Deleted in new
chr1	160205420	160215376	chr1:160205420-160215376	1	+	160208604	160213486	0	6	102,105,202,174,156,1955,	0,1712,3043,6122,7689,8001,
#Deleted in new
chr1	160211286	160213717	chr1:160211286-160213717	0	+	160211286	160211286	8553170	4	28,174,156,296,	0,256,1823,2135,
#Partially deleted in new
chr1	160215714	160262476	chr1:160215714-160262476	1	-	160217591	160244008	0	14	1994,117,120,131,108,58,73,111,95,141,674,75,74,201,	0,2609,3134,6936,8727,9347,9876,15582,21420,22892,23982,28245,45570,46561,
#Partially deleted in new
chr1	160215714	160262451	chr1:160215714-160262451	1	-	160217591	160244008	0	14	1994,117,120,131,108,58,73,111,95,141,674,75,74,335,	0,2609,3134,6936,8727,9347,9876,15582,21420,22892,23982,28245,45570,46402,
#Partially deleted in new
chr1	160215714	160262501	chr1:160215714-160262501	3	-	160217591	160244008	0	14	1994,117,120,131,108,58,73,111,95,141,674,75,74,53,	0,2609,3134,6936,8727,9347,9876,15582,21420,22892,23982,28245,45570,46734,
#Partially deleted in new
chr1	160216552	160224472	chr1:160216552-160224472	0	-	160216864	160224472	789624	3	356,126,31,	0,6103,7889,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	160216799	160280138	chr1:160216799-160280138	0	-	160263411	160280138	8553170	16	109,463,117,120,131,108,58,73,111,95,141,674,75,198,45,69,	0,446,1524,2049,5851,7642,8262,8791,14497,20335,21807,22897,27160,46465,63001,63270,
#Partially deleted in new
chr1	160217161	160218858	chr1:160217161-160218858	0	-	160217591	160218858	789624	4	315,131,117,10,	0,416,1162,1687,
#Partially deleted in new
chr1	160217346	160219314	chr1:160217346-160219314	0	-	160217346	160217346	8553170	3	362,117,466,	0,977,1502,
#Partially deleted in new
chr1	160217463	160285130	chr1:160217463-160285130	3	-	160217591	160282191	789624	18	245,117,120,131,108,58,73,111,95,141,674,75,61,45,177,162,166,76,	0,860,1385,5187,6978,7598,8127,13833,19671,21143,22233,26496,60667,62337,62606,64575,65480,67591,
#Partially deleted in new
chr1	160217466	160262531	chr1:160217466-160262531	0	-	160222778	160244008	789624	14	242,117,120,233,131,108,73,111,95,141,674,75,74,83,	0,857,1382,2992,5184,6975,8124,13830,19668,21140,22230,26493,43818,44982,
#Partially deleted in new
chr1	160217485	160224528	chr1:160217485-160224528	0	-	160221099	160224528	789624	7	223,117,120,74,124,131,87,	0,838,1363,2973,3601,5165,6956,
#Partially deleted in new
chr1	160217683	160220934	chr1:160217683-160220934	0	-	160217683	160217683	8553170	4	25,117,120,476,	0,640,1165,2775,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	160217850	160220139	chr1:160217850-160220139	0	-	160217850	160217850	8553170	2	590,1291,	0,998,
#Partially deleted in new
chr1	160221087	160238985	chr1:160221087-160238985	0	-	160221087	160221087	8553170	8	123,131,108,58,73,111,95,379,	0,1563,3354,3974,4503,10209,16047,17519,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	160239221	160262436	chr1:160239221-160262436	1	-	160239597	160244008	0	4	1149,75,41,161,	0,4738,22063,23054,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	160239221	160262425	chr1:160239221-160262425	1	-	160239597	160244008	0	4	1149,75,74,309,	0,4738,22063,22895,
#Partially deleted in new
chr1	160239783	160262514	chr1:160239783-160262514	0	-	160239783	160244008	789624	3	587,75,66,	0,4176,22665,
#Partially deleted in new
chr1	160239969	160261802	chr1:160239969-160261802	0	-	160239969	160240344	789624	2	401,518,	0,21315,
#Partially deleted in new
chr1	160240090	160262528	chr1:160240090-160262528	0	-	160240090	160244008	789624	4	280,75,66,80,	0,3869,21194,22358,
#Partially deleted in new
chr1	160240101	160262448	chr1:160240101-160262448	0	-	160240101	160244008	789624	3	269,75,173,	0,3858,22174,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	160240141	160282458	chr1:160240141-160282458	0	-	160240141	160282458	789624	7	229,198,61,45,177,162,42,	0,23123,37989,39659,39928,41897,42275,
#Partially deleted in new
chr1	160240297	160262407	chr1:160240297-160262407	0	-	160240297	160244008	789624	3	73,75,291,	0,3662,21819,
#Deleted in new
chr1	160261743	160262778	chr1:160261743-160262778	3	+	160261743	160261743	789624	2	179,378,	0,657,
#Deleted in new
chr1	160262014	160262720	chr1:160262014-160262720	1	+	160262014	160262014	8553170	2	264,320,	0,386,
#Deleted in new
chr1	160266339	160267225	chr1:160266339-160267225	7	-	160266339	160266339	16724991	1	886,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	160276811	160285146	chr1:160276811-160285146	3	-	160279550	160285124	0	8	2823,45,177,162,86,166,110,92,	0,2989,3258,5227,5605,6132,6718,8243,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	160276866	160285154	chr1:160276866-160285154	0	-	160283056	160285124	789624	7	2768,45,177,162,86,166,100,	0,2934,3203,5172,5550,6077,8188,
#Deleted in new
chr1	160277301	160280082	chr1:160277301-160280082	0	-	160277301	160277301	8553170	4	86,61,45,13,	0,829,2499,2768,
#Partially deleted in new
chr1	160279394	160282144	chr1:160279394-160282144	0	-	160279770	160282144	789624	3	451,177,106,	0,675,2644,
#Partially deleted in new
chr1	160279483	160284223	chr1:160279483-160284223	0	-	160280193	160284140	789624	7	151,45,177,162,166,110,93,	0,317,586,2555,3460,4046,4647,
#Partially deleted in new
chr1	160279492	160285146	chr1:160279492-160285146	0	-	160280193	160285124	789624	7	142,45,177,162,166,110,92,	0,308,577,2546,3451,4037,5562,
#Partially deleted in new
chr1	160280075	160284231	chr1:160280075-160284231	0	-	160280075	160284140	789624	6	171,162,86,166,110,101,	0,1963,2341,2868,3454,4055,
#Partially deleted in new
chr1	160280175	160282519	chr1:160280175-160282519	0	-	160280175	160280175	8553170	2	71,481,	0,1863,
#Partially deleted in new
chr1	160282070	160286348	chr1:160282070-160286348	0	-	160282070	160282070	8553170	5	130,86,166,110,64,	0,346,873,1459,4214,
#Deleted in new
chr1	160282105	160285133	chr1:160282105-160285133	0	-	160282105	160282105	8553170	4	95,86,284,79,	0,311,720,2949,
#Deleted in new
chr1	160282317	160285141	chr1:160282317-160285141	0	-	160282317	160282317	8553170	4	185,166,110,87,	0,626,1212,2737,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr1	160288685	160343273	chr1:160288685-160343273	0	-	160333677	160343170	8553170	32	1531,195,162,111,187,137,69,78,110,90,124,89,96,190,147,163,139,86,140,83,76,67,151,83,136,100,110,110,77,81,114,143,	0,1806,2649,3133,3326,3798,4480,4700,5798,6082,7050,7375,8657,8870,10159,10416,16747,17002,17668,18477,20415,21506,23182,24399,25304,34745,36857,43762,44917,46556,51495,54445,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr1	160289200	160332490	chr1:160289200-160332490	0	-	160290156	160332490	8553170	27	1016,195,162,111,187,137,69,78,110,90,124,89,96,190,163,139,86,140,83,76,67,151,83,136,100,110,43,	0,1291,2134,2618,2811,3283,3965,4185,5283,5567,6535,6860,8142,8355,9901,16232,16487,17153,17962,19900,20991,22667,23884,24789,34230,36342,43247,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr1	160289272	160343400	chr1:160289272-160343400	3	-	160290156	160343170	789624	33	944,195,162,111,187,137,69,78,110,90,124,89,96,190,147,163,139,86,140,83,76,67,151,83,136,100,110,110,77,81,74,114,270,	0,1219,2062,2546,2739,3211,3893,4113,5211,5495,6463,6788,8070,8283,9572,9829,16160,16415,17081,17890,19828,20919,22595,23812,24717,34158,36270,43175,44330,45969,50636,50908,53858,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr1	160289272	160343248	chr1:160289272-160343248	1	-	160290156	160343170	789624	33	944,195,162,111,187,137,69,78,110,90,124,89,96,190,147,163,166,86,140,83,76,67,151,83,136,100,110,110,77,81,74,114,118,	0,1219,2062,2546,2739,3211,3893,4113,5211,5495,6463,6788,8070,8283,9572,9829,16160,16415,17081,17890,19828,20919,22595,23812,24717,34158,36270,43175,44330,45969,50636,50908,53858,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr1	160289290	160343209	chr1:160289290-160343209	0	-	160289290	160289290	8553170	31	926,195,162,111,187,137,69,78,110,90,124,89,96,190,147,139,86,140,83,76,67,151,83,136,100,110,1232,81,74,114,79,	0,1201,2044,2528,2721,3193,3875,4095,5193,5477,6445,6770,8052,8265,9554,16142,16397,17063,17872,19810,20901,22577,23794,24699,34140,36252,43157,45951,50618,50890,53840,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr1	160289292	160343258	chr1:160289292-160343258	1	-	160290156	160343170	8553170	33	924,195,162,111,187,137,69,78,110,90,124,89,96,190,87,163,139,86,140,83,76,67,151,83,136,100,110,110,77,81,74,114,128,	0,1199,2042,2526,2719,3191,3873,4093,5191,5475,6443,6768,8050,8263,9552,9809,16140,16395,17061,17870,19808,20899,22575,23792,24697,34138,36250,43155,44310,45949,50616,50888,53838,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr1	160289292	160343247	chr1:160289292-160343247	0	-	160325585	160343170	8553170	31	924,195,162,111,187,137,69,78,110,90,124,89,96,190,147,163,139,86,140,83,76,67,151,83,136,100,110,110,74,114,117,	0,1199,2042,2526,2719,3191,3873,4093,5191,5475,6443,6768,8050,8263,9552,9809,16140,16395,17061,17870,19808,20899,22575,23792,24697,34138,36250,43155,50616,50888,53838,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr1	160289294	160343247	chr1:160289294-160343247	0	-	160325585	160343170	8553170	31	922,195,162,111,187,137,69,78,110,90,124,89,96,190,147,163,139,86,140,76,67,151,83,136,100,110,110,81,74,114,117,	0,1197,2040,2524,2717,3189,3871,4091,5189,5473,6441,6766,8048,8261,9550,9807,16138,16393,17059,19806,20897,22573,23790,24695,34136,36248,43153,45947,50614,50886,53836,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr1	160289300	160343244	chr1:160289300-160343244	0	-	160305746	160343170	8553170	33	916,195,162,111,187,137,69,78,110,90,124,89,96,190,147,163,139,86,39,83,76,67,151,83,136,100,110,110,77,81,74,114,114,	0,1191,2034,2518,2711,3183,3865,4085,5183,5467,6435,6760,8042,8255,9544,9801,16132,16387,17154,17862,19800,20891,22567,23784,24689,34130,36242,43147,44302,45941,50608,50880,53830,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	160289353	160297356	chr1:160289353-160297356	0	-	160290156	160297356	8553170	12	863,195,162,111,187,137,78,110,90,124,89,14,	0,1138,1981,2465,2658,3130,4032,5130,5414,6382,6707,7989,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr1	160289614	160343252	chr1:160289614-160343252	1	-	160290156	160343170	8553170	33	602,195,162,111,187,77,69,78,110,90,124,89,96,190,147,163,139,86,140,83,76,67,151,83,136,100,110,110,77,81,74,114,122,	0,877,1720,2204,2397,2869,3551,3771,4869,5153,6121,6446,7728,7941,9230,9487,15818,16073,16739,17548,19486,20577,22253,23470,24375,33816,35928,42833,43988,45627,50294,50566,53516,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr1	160289626	160343244	chr1:160289626-160343244	0	-	160297582	160343170	8553170	31	590,195,162,111,187,137,69,78,110,90,124,89,96,190,139,86,140,83,76,67,151,83,136,100,110,110,77,81,74,114,114,	0,865,1708,2192,2385,2857,3539,3759,4857,5141,6109,6434,7716,7929,15806,16061,16727,17536,19474,20565,22241,23458,24363,33804,35916,42821,43976,45615,50282,50554,53504,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr1	160289780	160332552	chr1:160289780-160332552	0	-	160313117	160332552	8553170	27	436,195,162,111,187,137,69,78,110,90,124,89,96,190,147,163,139,86,140,83,76,67,151,83,100,110,105,	0,711,1554,2038,2231,2703,3385,3605,4703,4987,5955,6280,7562,7775,9064,9321,15652,15907,16573,17382,19320,20411,22087,23304,33650,35762,42667,
#Partially deleted in new
chr1	160294802	160299279	chr1:160294802-160299279	0	-	160294802	160294802	8553170	7	55,124,89,96,190,147,178,	0,933,1258,2540,2753,4042,4299,
#Partially deleted in new
chr1	160294806	160332546	chr1:160294806-160332546	0	-	160294806	160332546	8553170	19	51,124,89,96,190,147,163,139,86,140,83,76,67,151,83,136,100,26,99,	0,929,1254,2536,2749,4038,4295,10626,10881,11547,12356,14294,15385,17061,18278,19183,28624,30736,37641,
#Partially deleted in new
chr1	160299140	160309150	chr1:160299140-160309150	0	-	160299140	160299140	8553170	5	124,139,86,140,50,	0,6292,6547,7213,9960,
#Deleted in new
chr1	160305230	160305924	chr1:160305230-160305924	0	-	160305230	160305230	8553170	2	341,237,	0,457,
#Deleted in new
chr1	160308929	160310522	chr1:160308929-160310522	0	-	160308929	160308929	8553170	2	247,331,	0,1262,
#Deleted in new
chr1	160317402	160317706	chr1:160317402-160317706	7	+	160317402	160317402	16724991	1	304,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	160326103	160326216	chr1:160326103-160326216	3	-	160326103	160326103	8553170	1	113,	0,
#Partially deleted in new
chr1	160333461	160343259	chr1:160333461-160343259	0	-	160333461	160333461	8553170	5	218,81,74,114,129,	0,1780,6447,6719,9669,
#Deleted in new
chr1	160339436	160340208	chr1:160339436-160340208	0	-	160339436	160339436	8553170	2	546,28,	0,744,
#Partially deleted in new
chr1	160343271	160358952	chr1:160343271-160358952	3	+	160343396	160358271	0	17	210,105,124,122,146,151,110,153,105,78,173,103,96,88,155,213,804,	0,1450,5727,6277,6833,7950,8424,8782,9615,9888,10846,12383,12591,12988,13328,13769,14877,
#Partially deleted in new
chr1	160343315	160358952	chr1:160343315-160358952	0	+	160343396	160344600	789624	18	166,139,105,124,122,146,151,110,153,105,78,173,103,96,88,155,213,804,	0,1160,1406,5683,6233,6789,7906,8380,8738,9571,9844,10802,12339,12547,12944,13284,13725,14833,
#Partially deleted in new
chr1	160343352	160349575	chr1:160343352-160349575	0	+	160343396	160349575	789624	4	129,105,124,90,	0,1369,5646,6133,
#Partially deleted in new
chr1	160343385	160353237	chr1:160343385-160353237	0	+	160343396	160353237	789624	7	96,105,124,122,146,105,78,	0,1336,5613,6163,6719,9501,9774,
#Deleted in new
chr1	160343386	160345171	chr1:160343386-160345171	0	+	160343386	160343386	8553170	2	95,450,	0,1335,
#Partially deleted in new
chr1	160343390	160351236	chr1:160343390-160351236	0	+	160343396	160351236	789624	7	91,99,105,124,122,146,15,	0,313,1331,5608,6158,6714,7831,
#Partially deleted in new
chr1	160343392	160350205	chr1:160343392-160350205	0	+	160343396	160343834	789624	6	89,185,105,124,122,101,	0,311,1329,5606,6156,6712,
#Partially deleted in new
chr1	160343661	160349668	chr1:160343661-160349668	0	+	160343661	160343661	8553170	4	141,105,124,120,	0,1060,5337,5887,
#Partially deleted in new
chr1	160349655	160356347	chr1:160349655-160356347	0	+	160349655	160351743	789624	11	15,146,110,153,105,78,179,173,103,96,88,	0,449,2040,2398,3231,3504,3667,4462,5999,6207,6604,
#Partially deleted in new
chr1	160350104	160355753	chr1:160350104-160355753	0	+	160350104	160355753	789624	8	146,85,110,153,105,78,173,99,	0,1183,1591,1949,2782,3055,4013,5550,
#Deleted in new
chr1	160351335	160355729	chr1:160351335-160355729	0	+	160351335	160355729	789624	7	37,110,81,105,78,173,75,	0,360,790,1551,1824,2782,4319,
#Deleted in new
chr1	160352075	160356754	chr1:160352075-160356754	0	+	160352075	160356754	789624	7	131,78,173,103,96,88,155,	0,1084,2042,3579,3787,4184,4524,
#Deleted in new
chr1	160355684	160356934	chr1:160355684-160356934	0	+	160355684	160355684	8553170	4	73,96,88,335,	0,178,575,915,
#Partially deleted in new
chr1	160356897	160358648	chr1:160356897-160358648	0	+	160356897	160356897	8553170	2	356,500,	0,1251,
#Partially deleted in new
chr1	160367066	160372848	chr1:160367066-160372848	3	+	160370731	160371133	789624	2	271,2292,	0,3490,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	160392767	160392909	chr1:160392767-160392909	3	-	160392767	160392767	8553170	1	142,	0,
#Partially deleted in new
chr1	160400585	160428678	chr1:160400585-160428678	3	+	160415837	160425378	789624	8	284,261,121,608,137,136,232,3561,	0,15062,15476,18416,19825,20466,23466,24532,
#Partially deleted in new
chr1	160419492	160424147	chr1:160419492-160424147	0	+	160419492	160419492	8553170	3	117,136,96,	0,1559,4559,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	160485029	160523262	chr1:160485029-160523262	3	-	160486706	160523192	0	8	1725,72,80,39,111,264,333,119,	0,2074,4058,5168,5545,6095,11031,38114,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	160485054	160523253	chr1:160485054-160523253	1	-	160486706	160523192	0	8	1700,72,83,39,111,264,333,110,	0,2049,4033,5143,5520,6070,11006,38089,
#Partially deleted in new
chr1	160486692	160523242	chr1:160486692-160523242	1	-	160486706	160523192	0	7	62,72,83,39,111,264,99,	0,411,2395,3505,3882,4432,36451,
#Partially deleted in new
chr1	160537072	160571458	chr1:160537072-160571458	3	+	160537072	160537072	8553170	2	115,520,	0,33866,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	160541094	160579516	chr1:160541094-160579516	1	-	160548255	160579437	0	6	7227,63,98,120,252,125,	0,8822,9843,12283,12800,38297,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	160541097	160579473	chr1:160541097-160579473	3	-	160548255	160579437	0	7	7224,63,98,120,252,342,82,	0,8819,9840,12280,12797,24306,38294,
#Deleted in new
chr1	160548088	160551410	chr1:160548088-160551410	0	-	160548088	160548088	8553170	3	233,63,473,	0,1828,2849,
#Partially deleted in new
chr1	160548244	160579504	chr1:160548244-160579504	1	-	160548255	160579437	0	8	77,63,98,33,138,252,342,113,	0,1672,2693,4460,5115,5650,17159,31147,
#Partially deleted in new
chr1	160548244	160579504	chr1:160548244-160579504	1	-	160548255	160579437	0	8	77,63,98,33,120,252,342,113,	0,1672,2693,4460,5133,5650,17159,31147,
#Partially deleted in new
chr1	160548246	160579504	chr1:160548246-160579504	1	-	160549920	160579437	0	6	75,63,120,252,342,113,	0,1670,5131,5648,17157,31145,
#Partially deleted in new
chr1	160552906	160579504	chr1:160552906-160579504	0	-	160552906	160552906	8553170	4	591,252,342,113,	0,988,12497,26485,
#Partially deleted in new
chr1	160553745	160579504	chr1:160553745-160579504	0	-	160553745	160553745	8553170	3	401,342,113,	0,11658,25646,
#Partially deleted in new
chr1	160608099	160647295	chr1:160608099-160647295	3	-	160610747	160646945	0	7	2699,93,74,90,285,339,426,	0,4388,11676,15996,26513,29091,38770,
#Partially deleted in new
chr1	160610178	160647295	chr1:160610178-160647295	1	-	160610276	160646945	789624	3	164,293,426,	0,27058,36691,
#Partially deleted in new
chr1	160610764	160646958	chr1:160610764-160646958	1	-	160610764	160646945	0	8	34,93,74,83,90,285,339,89,	0,1723,9011,12738,13331,23848,26426,36105,
#Partially deleted in new
chr1	160637010	160647021	chr1:160637010-160647021	0	-	160637010	160637010	8553170	2	519,152,	0,9859,
#Deleted in new
chr1	160670147	160670979	chr1:160670147-160670979	7	+	160670147	160670147	16724991	1	832,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	160673011	160684067	chr1:160673011-160684067	1	+	160673011	160673011	8553170	4	643,145,113,469,	0,3348,5931,10587,
#Partially deleted in new
chr1	160673521	160683908	chr1:160673521-160683908	1	+	160673521	160673521	8553170	3	133,113,310,	0,5421,10077,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	160676370	160684314	chr1:160676370-160684314	0	+	160676370	160676370	8553170	3	134,95,716,	0,2590,7228,
#Duplicated in new
chr1	160676370	160692240	chr1:160676370-160692240	0	+	160676370	160676370	8553170	5	134,113,97,119,546,	0,2572,7228,8612,15324,
#Partially deleted in new
chr1	160678745	160711851	chr1:160678745-160711851	3	-	160679051	160711763	0	4	386,267,303,170,	0,2456,6141,32936,
#Partially deleted in new
chr1	160680421	160711831	chr1:160680421-160711831	1	-	160681094	160711763	789624	3	1047,303,150,	0,4465,31260,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	160683518	160711803	chr1:160683518-160711803	1	-	160684761	160711763	0	2	1671,122,	0,28163,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	160739056	160754814	chr1:160739056-160754814	1	+	160739301	160753177	789624	5	300,321,104,63,1709,	0,9137,12288,13129,14049,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	160739056	160754814	chr1:160739056-160754814	1	+	160739301	160753164	789624	4	300,321,63,1709,	0,9137,13129,14049,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	160739056	160754814	chr1:160739056-160754814	1	+	160739301	160753164	789624	4	300,273,63,1709,	0,10764,13129,14049,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	160739056	160754814	chr1:160739056-160754814	1	+	160739301	160753177	789624	5	300,273,104,63,1709,	0,10764,12288,13129,14049,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	160739056	160754814	chr1:160739056-160754814	1	+	160739301	160753177	789624	6	300,312,120,104,63,1709,	0,10764,11247,12288,13129,14049,
#Partially deleted in new
chr1	160739246	160748368	chr1:160739246-160748368	0	+	160739246	160739246	8553170	3	110,239,175,	0,265,8947,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	160739264	160754821	chr1:160739264-160754821	3	+	160739301	160753177	789624	7	92,321,273,120,104,63,1716,	0,8929,10556,11039,12080,12921,13841,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	160739267	160754821	chr1:160739267-160754821	1	+	160739301	160753177	789624	6	89,273,120,104,63,1716,	0,10553,11036,12077,12918,13838,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	160739290	160754821	chr1:160739290-160754821	1	+	160739301	160753164	789624	6	66,321,273,120,63,1716,	0,8903,10530,11013,12895,13815,
#Partially deleted in new
chr1	160739303	160752246	chr1:160739303-160752246	0	+	160739303	160752246	789624	4	53,321,273,61,	0,8890,10517,12882,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	160750422	160754821	chr1:160750422-160754821	0	+	160750422	160750422	8553170	2	1826,1716,	0,2683,
#Deleted in new
chr1	160775953	160776608	chr1:160775953-160776608	7	-	160775953	160775953	16724991	2	261,262,	0,393,
#Partially deleted in new
chr1	160776974	160780140	chr1:160776974-160780140	7	-	160776974	160776974	16724991	2	265,290,	0,2876,
#Partially deleted in new
chr1	160796073	160828261	chr1:160796073-160828261	1	+	160796187	160827816	789624	10	238,330,276,342,270,102,54,290,69,514,	0,3679,17562,18346,20520,22144,23247,27433,28107,31674,
#Partially deleted in new
chr1	160796105	160800227	chr1:160796105-160800227	0	+	160796187	160797171	789624	3	206,166,475,	0,1004,3647,
#Partially deleted in new
chr1	160796111	160828255	chr1:160796111-160828255	1	+	160796187	160827816	789624	9	200,330,276,342,102,54,332,69,508,	0,3641,17524,18308,22106,23209,27353,28069,31636,
#Partially deleted in new
chr1	160796157	160828261	chr1:160796157-160828261	3	+	160796187	160827816	789624	10	154,330,276,342,270,102,54,332,69,514,	0,3595,17478,18262,20436,22060,23163,27307,28023,31590,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	160796186	160802698	chr1:160796186-160802698	1	+	160796187	160801917	789624	3	125,330,909,	0,3566,5603,
#Partially deleted in new
chr1	160796198	160813830	chr1:160796198-160813830	0	+	160796198	160796198	8553170	3	113,397,195,	0,3487,17437,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	160796199	160801965	chr1:160796199-160801965	0	+	160796199	160798929	789624	4	112,183,330,176,	0,2626,3553,5590,
#Partially deleted in new
chr1	160796207	160814643	chr1:160796207-160814643	0	+	160796207	160796207	8553170	4	104,397,331,224,	0,3478,17373,18212,
#Partially deleted in new
chr1	160796210	160799664	chr1:160796210-160799664	0	+	160796210	160796210	8553170	2	101,839,	0,2615,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	160809748	160815339	chr1:160809748-160815339	0	+	160809748	160809748	8553170	2	4163,920,	0,4671,
#Partially deleted in new
chr1	160814522	160828255	chr1:160814522-160828255	0	+	160814522	160827816	789624	6	239,270,102,54,290,508,	0,2071,3695,4798,8984,13225,
#Partially deleted in new
chr1	160830159	160862855	chr1:160830159-160862855	3	-	160831346	160862677	789624	9	1268,57,66,60,68,111,276,318,239,	0,2359,3891,6035,8291,8779,11050,11424,32457,
#Partially deleted in new
chr1	160831182	160862760	chr1:160831182-160862760	1	-	160831346	160862677	789624	9	245,57,66,60,68,111,291,318,144,	0,1336,2868,5012,7268,7756,10027,10401,31434,
#Partially deleted in new
chr1	160831270	160862700	chr1:160831270-160862700	1	-	160831346	160862677	789624	8	157,57,66,60,68,111,318,84,	0,1248,2780,4924,7180,7668,10313,31346,
#Partially deleted in new
chr1	160831270	160862700	chr1:160831270-160862700	0	-	160832689	160862677	789624	9	157,201,66,60,68,111,276,318,84,	0,1248,2780,4924,7180,7668,9939,10313,31346,
#Partially deleted in new
chr1	160832518	160839165	chr1:160832518-160839165	0	-	160832518	160832518	8553170	4	57,66,68,346,	0,1532,5932,6301,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	160848009	160848502	chr1:160848009-160848502	7	+	160848009	160848009	16724991	1	493,	0,
#Partially deleted in new
chr1	160876538	160885170	chr1:160876538-160885170	3	-	160876663	160884877	0	8	278,104,121,159,248,99,64,110,	0,2772,4049,4615,5418,6889,8281,8522,
#Partially deleted in new
chr1	160879311	160881521	chr1:160879311-160881521	0	-	160879311	160879311	8553170	3	103,121,368,	0,1276,1842,
#Partially deleted in new
chr1	160881153	160882295	chr1:160881153-160882295	0	-	160881153	160881153	8553170	2	159,339,	0,803,
#Partially deleted in new
chr1	160894979	160896076	chr1:160894979-160896076	7	+	160894979	160894979	16724991	1	1097,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	160931738	160934380	chr1:160931738-160934380	3	-	160931738	160931738	8553170	2	439,136,	0,2506,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	160932464	160949922	chr1:160932464-160949922	3	+	160932464	160932464	789624	6	127,410,92,101,134,1272,	0,452,1845,12393,12601,16186,
#Deleted in new
chr1	160935536	160936126	chr1:160935536-160936126	7	+	160935536	160935536	16724991	1	590,	0,
#Partially deleted in new
chr1	160945024	160954799	chr1:160945024-160954799	3	-	160945139	160954741	789624	8	268,104,121,159,248,114,64,73,	0,2904,5021,5528,6018,7595,9362,9702,
#Partially deleted in new
chr1	160945093	160951012	chr1:160945093-160951012	0	-	160945093	160945093	8553170	4	199,104,121,460,	0,2835,4952,5459,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	160950552	160951474	chr1:160950552-160951474	0	-	160950552	160950552	8553170	2	159,432,	0,490,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	160995210	161021348	chr1:160995210-161021348	3	-	160998870	161021073	0	10	3696,49,13,108,103,203,147,108,69,339,	0,3832,4185,4429,4665,4935,5420,5809,6074,25799,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	160995210	161021343	chr1:160995210-161021343	1	-	160998870	161021073	789624	11	3696,49,13,108,103,203,147,4,44,69,334,	0,3832,4185,4429,4665,4935,5420,5834,5873,6074,25799,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	160997956	161038944	chr1:160997956-161038944	3	-	161021389	161038889	789624	13	950,49,13,108,103,203,147,108,69,103,100,78,65,	0,1086,1439,1683,1919,2189,2674,3063,3328,23053,23431,24793,40923,
#Partially deleted in new
chr1	160998401	161021096	chr1:160998401-161021096	1	-	160998870	161021073	0	9	505,49,13,108,103,203,108,69,87,	0,641,994,1238,1474,1744,2618,2883,22608,
#Deleted in new
chr1	160999909	161001177	chr1:160999909-161001177	0	-	160999909	160999909	8553170	4	69,203,147,158,	0,236,721,1110,
#Partially deleted in new
chr1	161000145	161038962	chr1:161000145-161038962	0	-	161021389	161038889	789624	7	203,147,108,69,103,100,83,	0,485,874,1139,20864,21242,38734,
#Partially deleted in new
chr1	161000309	161021143	chr1:161000309-161021143	0	-	161000309	161000309	8553170	6	39,147,108,69,74,134,	0,321,710,975,2230,20700,
#Partially deleted in new
chr1	161000719	161021175	chr1:161000719-161021175	0	-	161000719	161000719	8553170	3	58,334,166,	0,300,20290,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	161034833	161035006	chr1:161034833-161035006	7	+	161034833	161034833	16724991	1	173,	0,
#Deleted in new
chr1	161037630	161038937	chr1:161037630-161038937	3	-	161037878	161038889	0	3	445,123,58,	0,920,1249,
#Deleted in new
chr1	161037630	161038950	chr1:161037630-161038950	1	-	161037774	161038889	0	4	196,163,144,71,	0,282,920,1249,
#Deleted in new
chr1	161037630	161038977	chr1:161037630-161038977	1	-	161037774	161038889	0	3	196,163,98,	0,282,1249,
#Deleted in new
chr1	161037630	161038990	chr1:161037630-161038990	1	-	161037774	161038889	0	4	196,163,123,111,	0,282,920,1249,
#Deleted in new
chr1	161037630	161038307	chr1:161037630-161038307	0	-	161037630	161037630	8553170	2	196,395,	0,282,
#Deleted in new
chr1	161037691	161038729	chr1:161037691-161038729	1	-	161037774	161038049	789624	3	135,163,179,	0,221,859,
#Deleted in new
chr1	161037897	161038916	chr1:161037897-161038916	0	-	161037897	161037897	8553170	2	776,37,	0,982,
#Partially deleted in new
chr1	161039250	161044941	chr1:161039250-161044941	1	-	161039919	161043275	0	11	759,129,95,59,88,196,102,116,50,93,30,	0,951,1325,1563,2073,2400,2865,3304,3582,4017,5661,
#Partially deleted in new
chr1	161039250	161045977	chr1:161039250-161045977	3	-	161039919	161043275	0	11	759,129,95,59,88,196,102,116,50,93,120,	0,951,1325,1563,2073,2400,2865,3304,3582,4017,6607,
#Deleted in new
chr1	161039294	161040583	chr1:161039294-161040583	0	-	161039294	161039294	8553170	2	715,382,	0,907,
#Partially deleted in new
chr1	161039854	161043359	chr1:161039854-161043359	1	-	161039919	161043275	789624	10	155,129,95,59,88,112,102,116,50,92,	0,347,721,959,1469,1880,2261,2700,2978,3413,
#Partially deleted in new
chr1	161039919	161045962	chr1:161039919-161045962	0	-	161042213	161043275	789624	11	90,129,95,59,88,196,102,85,50,93,105,	0,282,656,894,1404,1731,2196,2666,2913,3348,5938,
#Partially deleted in new
chr1	161039939	161041721	chr1:161039939-161041721	0	-	161039948	161041721	789624	6	70,122,95,59,88,71,	0,262,636,874,1384,1711,
#Partially deleted in new
chr1	161040208	161043342	chr1:161040208-161043342	0	-	161040208	161043275	789624	9	122,95,59,88,13,102,116,50,75,	0,367,605,1115,1625,1907,2346,2624,3059,
#Partially deleted in new
chr1	161040439	161045912	chr1:161040439-161045912	0	-	161040439	161040439	8553170	9	231,59,88,196,102,116,50,93,55,	0,374,884,1211,1676,2115,2393,2828,5418,
#Partially deleted in new
chr1	161041325	161045908	chr1:161041325-161045908	0	-	161041325	161041325	8553170	6	521,102,116,50,93,51,	0,790,1229,1507,1942,4532,
#Partially deleted in new
chr1	161041389	161045873	chr1:161041389-161045873	0	-	161041389	161042214	789624	7	22,196,102,116,50,108,16,	0,261,726,1165,1443,1863,4468,
#Partially deleted in new
chr1	161041606	161045939	chr1:161041606-161045939	0	-	161041606	161041606	8553170	5	240,116,50,93,82,	0,948,1226,1661,4251,
#Partially deleted in new
chr1	161046945	161069870	chr1:161046945-161069870	0	-	161046945	161046945	8553170	10	2389,266,402,258,760,108,83,145,103,343,	0,2478,4368,5340,5680,7420,7677,9442,12668,22582,
#Partially deleted in new
chr1	161046947	161069945	chr1:161046947-161069945	1	-	161047714	161069624	789624	12	2387,266,402,78,104,172,128,108,83,145,103,418,	0,2476,4366,5338,5492,5678,6310,7418,7675,9440,12666,22580,
#Partially deleted in new
chr1	161046947	161069666	chr1:161046947-161069666	3	-	161047714	161069624	789624	13	1408,346,266,402,78,104,172,128,108,83,145,103,139,	0,2041,2476,4366,5338,5492,5678,6310,7418,7675,9440,12666,22580,
#Partially deleted in new
chr1	161046948	161069970	chr1:161046948-161069970	1	-	161047714	161069624	789624	8	2386,266,402,78,104,172,128,351,	0,2475,4365,5337,5491,5677,6309,22671,
#Partially deleted in new
chr1	161048789	161069803	chr1:161048789-161069803	0	-	161054695	161069624	789624	11	545,266,402,78,104,172,128,108,83,103,276,	0,634,2524,3496,3650,3836,4468,5576,5833,10824,20738,
#Partially deleted in new
chr1	161054401	161069915	chr1:161054401-161069915	0	-	161054676	161069624	789624	3	72,83,388,	0,221,15126,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	161070994	161089599	chr1:161070994-161089599	3	-	161072660	161089296	0	9	1891,75,76,157,149,121,291,360,382,	0,2230,2725,3222,3616,5360,6458,8595,18223,
#Deleted in new
chr1	161072139	161074258	chr1:161072139-161074258	0	-	161072139	161072139	8553170	3	746,76,42,	0,1580,2077,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	161084464	161087571	chr1:161084464-161087571	3	+	161084464	161084464	8553170	3	348,92,669,	0,472,2438,
#Deleted in new
chr1	161098360	161100298	chr1:161098360-161100298	0	+	161098360	161098360	789624	5	44,397,160,199,238,	0,305,985,1237,1700,
#Deleted in new
chr1	161098362	161100343	chr1:161098362-161100343	0	+	161098362	161098362	8553170	4	42,397,199,283,	0,303,1235,1698,
#Deleted in new
chr1	161098381	161099418	chr1:161098381-161099418	0	+	161098381	161098381	8553170	2	23,753,	0,284,
#Deleted in new
chr1	161098393	161100346	chr1:161098393-161100346	3	+	161098535	161100224	789624	4	669,160,199,286,	0,952,1204,1667,
#Deleted in new
chr1	161098393	161100346	chr1:161098393-161100346	1	+	161098535	161099758	789624	4	669,160,218,286,	0,952,1185,1667,
#Deleted in new
chr1	161098439	161099735	chr1:161098439-161099735	0	+	161098439	161098439	8553170	4	42,397,160,138,	0,226,906,1158,
#Deleted in new
chr1	161098444	161099744	chr1:161098444-161099744	0	+	161098444	161098444	8553170	3	37,397,147,	0,221,1153,
#Deleted in new
chr1	161099507	161100346	chr1:161099507-161100346	0	+	161099507	161099507	8553170	2	289,286,	0,553,
#Partially deleted in new
chr1	161100555	161118111	chr1:161100555-161118111	3	-	161100682	161118026	789624	4	304,124,89,160,	0,1492,1731,17396,
#Partially deleted in new
chr1	161100555	161118055	chr1:161100555-161118055	0	-	161100555	161100555	8553170	2	304,104,	0,17396,
#Deleted in new
chr1	161118085	161120232	chr1:161118085-161120232	0	+	161118085	161118085	8553170	6	93,78,255,104,134,126,	0,718,1048,1423,1733,2021,
#Deleted in new
chr1	161118100	161121067	chr1:161118100-161121067	3	+	161118176	161120765	789624	7	78,96,255,104,134,126,569,	0,685,1033,1408,1718,2006,2398,
#Deleted in new
chr1	161118104	161119952	chr1:161118104-161119952	0	+	161118104	161118104	8553170	4	74,255,104,134,	0,1029,1404,1714,
#Deleted in new
chr1	161118111	161119897	chr1:161118111-161119897	0	+	161118111	161118111	8553170	4	67,255,104,73,	0,1022,1397,1713,
#Deleted in new
chr1	161118113	161119611	chr1:161118113-161119611	0	+	161118113	161118113	8553170	4	96,96,255,103,	0,672,1020,1395,
#Deleted in new
chr1	161118116	161121193	chr1:161118116-161121193	1	+	161118498	161120765	789624	6	435,255,104,134,126,695,	0,1017,1392,1702,1990,2382,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	161118117	161125445	chr1:161118117-161125445	1	+	161118176	161124155	789624	7	61,96,255,104,134,126,1305,	0,668,1016,1391,1701,1989,6023,
#Deleted in new
chr1	161118117	161121193	chr1:161118117-161121193	1	+	161119143	161120765	789624	7	108,96,255,104,134,126,695,	0,668,1016,1391,1701,1989,2381,
#Deleted in new
chr1	161118117	161120232	chr1:161118117-161120232	0	+	161118117	161118117	8553170	6	108,96,255,104,134,126,	0,668,1016,1391,1701,1989,
#Deleted in new
chr1	161118124	161119241	chr1:161118124-161119241	0	+	161118124	161118124	8553170	2	115,108,	0,1009,
#Deleted in new
chr1	161118139	161119307	chr1:161118139-161119307	0	+	161118139	161118139	8553170	3	100,96,174,	0,646,994,
#Deleted in new
chr1	161118219	161120568	chr1:161118219-161120568	0	+	161118219	161118219	8553170	6	662,255,104,134,126,70,	0,914,1289,1599,1887,2279,
#Deleted in new
chr1	161118380	161119916	chr1:161118380-161119916	0	+	161118380	161118380	8553170	3	501,479,98,	0,753,1438,
#Deleted in new
chr1	161118785	161120804	chr1:161118785-161120804	0	+	161118785	161118785	8553170	6	96,255,120,134,126,306,	0,348,707,1033,1321,1713,
#Deleted in new
chr1	161118907	161119943	chr1:161118907-161119943	0	+	161118907	161118907	8553170	3	481,104,125,	0,601,911,
#Partially deleted in new
chr1	161120973	161132668	chr1:161120973-161132668	1	-	161122146	161124462	789624	6	1550,147,108,389,33,118,	0,2101,2865,3164,9841,11577,
#Partially deleted in new
chr1	161120973	161131097	chr1:161120973-161131097	0	-	161120973	161120973	8553170	2	170,144,	0,9980,
#Partially deleted in new
chr1	161120976	161132466	chr1:161120976-161132466	1	-	161122146	161124462	789624	6	1547,147,108,389,33,76,	0,2098,2862,3161,9838,11414,
#Partially deleted in new
chr1	161120976	161132688	chr1:161120976-161132688	3	-	161122146	161124462	789624	5	1547,147,108,389,138,	0,2098,2862,3161,11574,
#Partially deleted in new
chr1	161121743	161132572	chr1:161121743-161132572	0	-	161121743	161121743	8553170	6	780,100,108,73,33,22,	0,1331,2095,2394,9071,10807,
#Partially deleted in new
chr1	161121786	161132667	chr1:161121786-161132667	1	-	161122146	161124462	789624	6	737,147,108,389,29,117,	0,1288,2052,2351,9028,10764,
#Partially deleted in new
chr1	161121929	161130847	chr1:161121929-161130847	0	-	161121929	161121929	8553170	6	594,147,108,73,113,33,	0,1145,1909,2208,2484,8885,
#Partially deleted in new
chr1	161122024	161130837	chr1:161122024-161130837	1	-	161122146	161124462	789624	5	499,237,108,389,23,	0,960,1814,2113,8790,
#Partially deleted in new
chr1	161122241	161132588	chr1:161122241-161132588	0	-	161122241	161124462	789624	5	282,147,108,389,38,	0,833,1597,1896,10309,
#Partially deleted in new
chr1	161122262	161132450	chr1:161122262-161132450	0	-	161122262	161122262	8553170	7	261,147,108,73,187,33,60,	0,812,1576,1875,2077,8552,10128,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	161122306	161124811	chr1:161122306-161124811	0	+	161122306	161122306	8553170	2	32,671,	0,1834,
#Partially deleted in new
chr1	161122332	161132476	chr1:161122332-161132476	0	-	161122332	161122332	8553170	6	191,147,108,389,33,86,	0,742,1506,1805,8482,10058,
#Partially deleted in new
chr1	161122350	161132151	chr1:161122350-161132151	0	-	161122350	161122350	8553170	8	173,147,108,78,113,33,177,46,	0,724,1488,1782,2063,8464,8655,9755,
#Deleted in new
chr1	161141207	161141336	chr1:161141207-161141336	3	-	161141207	161141207	8553170	1	129,	0,
#Partially deleted in new
chr1	161153751	161158856	chr1:161153751-161158856	3	+	161153997	161158492	0	6	369,68,64,77,91,445,	0,3198,3502,3865,4369,4660,
#Partially deleted in new
chr1	161153759	161159349	chr1:161153759-161159349	3	-	161153759	161153759	8553170	2	331,48,	0,5542,
#Partially deleted in new
chr1	161153983	161158682	chr1:161153983-161158682	0	+	161153983	161153983	8553170	5	137,68,64,77,271,	0,2966,3270,3633,4428,
#Partially deleted in new
chr1	161153984	161157355	chr1:161153984-161157355	0	+	161153984	161153984	8553170	2	86,406,	0,2965,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	161153993	161158245	chr1:161153993-161158245	0	+	161153993	161153993	8553170	4	127,68,64,629,	0,2956,3260,3623,
#Partially deleted in new
chr1	161154056	161157460	chr1:161154056-161157460	0	+	161154056	161154056	8553170	3	64,68,207,	0,2893,3197,
#Deleted in new
chr1	161159449	161162368	chr1:161159449-161162368	0	+	161160640	161162368	789624	5	229,141,621,60,99,	0,916,1170,2588,2820,
#Deleted in new
chr1	161159463	161165714	chr1:161159463-161165714	3	+	161160640	161165447	0	14	215,141,621,60,121,112,156,65,104,87,79,108,115,358,	0,902,1156,2574,2806,3151,3455,4091,4414,4700,5070,5371,5565,5893,
#Deleted in new
chr1	161159478	161165723	chr1:161159478-161165723	1	+	161160640	161165447	0	13	200,621,60,121,112,156,65,104,87,79,108,115,367,	0,1141,2559,2791,3136,3440,4076,4399,4685,5055,5356,5550,5878,
#Deleted in new
chr1	161159520	161160992	chr1:161159520-161160992	0	+	161160640	161160992	789624	3	158,178,373,	0,808,1099,
#Deleted in new
chr1	161159536	161165723	chr1:161159536-161165723	1	+	161160640	161165447	0	13	142,621,60,121,112,156,65,104,87,79,108,73,367,	0,1083,2501,2733,3078,3382,4018,4341,4627,4997,5298,5534,5820,
#Deleted in new
chr1	161160743	161162680	chr1:161160743-161162680	0	+	161160743	161161215	789624	5	232,119,60,121,66,	0,378,1294,1526,1871,
#Deleted in new
chr1	161161362	161165723	chr1:161161362-161165723	0	+	161161362	161161362	8553170	9	735,121,112,156,65,735,108,115,367,	0,907,1252,1556,2192,2515,3472,3666,3994,
#Deleted in new
chr1	161162623	161164822	chr1:161162623-161164822	0	+	161162623	161162623	8553170	6	103,156,65,45,87,289,	0,295,931,1254,1540,1910,
#Deleted in new
chr1	161163554	161165627	chr1:161163554-161165627	0	+	161163554	161164165	789624	7	65,45,87,79,108,115,271,	0,323,609,979,1280,1474,1802,
#Deleted in new
chr1	161163878	161165505	chr1:161163878-161165505	0	+	161163878	161163878	8553170	5	103,87,409,115,149,	0,285,655,1150,1478,
#Partially deleted in new
chr1	161166409	161171218	chr1:161166409-161171218	3	+	161166847	161171176	0	13	202,95,135,116,133,145,191,61,119,111,150,43,185,	0,430,690,961,1585,2022,2583,3250,3496,3999,4210,4497,4624,
#Partially deleted in new
chr1	161166414	161171216	chr1:161166414-161171216	1	+	161166847	161171176	0	13	258,95,135,116,133,145,191,61,119,111,150,43,183,	0,425,685,956,1580,2017,2578,3245,3491,3994,4205,4492,4619,
#Partially deleted in new
chr1	161166429	161177041	chr1:161166429-161177041	0	+	161166847	161177041	789624	5	243,95,135,150,193,	0,410,670,4190,10419,
#Partially deleted in new
chr1	161166438	161169720	chr1:161166438-161169720	0	+	161166847	161169076	789624	7	234,95,135,116,133,191,61,	0,401,661,932,1556,2554,3221,
#Partially deleted in new
chr1	161166438	161168545	chr1:161166438-161168545	0	+	161166438	161166438	8553170	5	234,95,387,133,114,	0,401,661,1556,1993,
#Partially deleted in new
chr1	161166451	161170949	chr1:161166451-161170949	0	+	161166847	161170467	789624	7	221,95,135,61,111,150,43,	0,388,648,3208,3957,4168,4455,
#Partially deleted in new
chr1	161166469	161171220	chr1:161166469-161171220	1	+	161166847	161171176	789624	6	203,95,135,150,43,187,	0,370,630,4150,4437,4564,
#Partially deleted in new
chr1	161166479	161178013	chr1:161166479-161178013	0	+	161166847	161167353	789624	11	132,95,135,148,164,191,61,119,111,150,1165,	0,360,620,859,1933,2513,3180,3426,3929,4140,10369,
#Partially deleted in new
chr1	161166497	161177092	chr1:161166497-161177092	1	+	161166847	161177082	789624	4	175,95,150,244,	0,342,4122,10351,
#Partially deleted in new
chr1	161166677	161168406	chr1:161166677-161168406	0	+	161166677	161166677	8553170	3	257,387,412,	0,422,1317,
#Partially deleted in new
chr1	161166839	161171218	chr1:161166839-161171218	1	+	161166847	161171176	789624	4	95,150,43,185,	0,3780,4067,4194,
#Partially deleted in new
chr1	161168094	161169706	chr1:161168094-161169706	0	+	161168094	161168094	8553170	3	33,145,714,	0,337,898,
#Partially deleted in new
chr1	161168259	161169840	chr1:161168259-161169840	0	+	161168259	161168259	8553170	2	317,848,	0,733,
#Partially deleted in new
chr1	161168394	161169985	chr1:161168394-161169985	0	+	161168394	161168394	8553170	4	182,191,61,80,	0,598,1265,1511,
#Partially deleted in new
chr1	161168522	161171218	chr1:161168522-161171218	0	+	161168522	161171176	789624	6	54,191,111,150,43,185,	0,470,1886,2097,2384,2511,
#Partially deleted in new
chr1	161169283	161171181	chr1:161169283-161171181	0	+	161169283	161169283	8553170	5	741,111,150,43,148,	0,1125,1336,1623,1750,
#Partially deleted in new
chr1	161169684	161171218	chr1:161169684-161171218	0	+	161169684	161170975	789624	5	36,119,111,150,312,	0,221,724,935,1222,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	161170260	161171181	chr1:161170260-161171181	0	+	161170260	161170260	8553170	2	509,275,	0,646,
#Partially deleted in new
chr1	161171309	161177485	chr1:161171309-161177485	1	-	161171815	161176060	789624	8	780,105,123,191,236,267,146,63,	0,917,2295,2549,3683,4498,5124,6113,
#Partially deleted in new
chr1	161171310	161177420	chr1:161171310-161177420	0	-	161171310	161171310	8553170	5	779,105,445,236,1613,	0,916,2294,3682,4497,
#Partially deleted in new
chr1	161171310	161177968	chr1:161171310-161177968	3	-	161171815	161176060	789624	8	779,105,123,191,236,288,146,546,	0,916,2294,2548,3682,4497,5123,6112,
#Partially deleted in new
chr1	161171311	161177497	chr1:161171311-161177497	1	-	161171815	161176060	789624	8	778,105,123,191,236,288,75,75,	0,915,2293,2547,3681,4496,5122,6111,
#Deleted in new
chr1	161171965	161172410	chr1:161171965-161172410	0	-	161171965	161171965	8553170	2	124,184,	0,261,
#Partially deleted in new
chr1	161173604	161177479	chr1:161173604-161177479	0	-	161173604	161173604	8553170	6	123,191,236,86,146,57,	0,254,1388,2203,2829,3818,
#Partially deleted in new
chr1	161173858	161176156	chr1:161173858-161176156	0	-	161173858	161173858	8553170	3	191,236,349,	0,1134,1949,
#Deleted in new
chr1	161174906	161177494	chr1:161174906-161177494	0	-	161174906	161174906	8553170	4	322,267,146,72,	0,901,1527,2516,
#Deleted in new
chr1	161174994	161177468	chr1:161174994-161177468	0	-	161174994	161174994	8553170	5	234,288,146,195,46,	0,813,1439,1917,2428,
#Deleted in new
chr1	161175051	161177149	chr1:161175051-161177149	0	-	161175051	161175051	8553170	4	177,288,146,92,	0,756,1382,2006,
#Deleted in new
chr1	161175807	161177491	chr1:161175807-161177491	0	-	161175807	161175807	8553170	4	288,75,125,69,	0,626,805,1615,
#Deleted in new
chr1	161175807	161177497	chr1:161175807-161177497	0	-	161175807	161175807	8553170	4	267,146,192,75,	0,626,1104,1615,
#Deleted in new
chr1	161175961	161177479	chr1:161175961-161177479	0	-	161175961	161175961	8553170	3	113,673,57,	0,472,1461,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	161184307	161199056	chr1:161184307-161199056	3	-	161191137	161198627	0	9	7257,176,176,187,287,171,133,324,1062,	0,7757,8905,9332,9627,11157,11863,12249,13687,
#Partially deleted in new
chr1	161194161	161195751	chr1:161194161-161195751	0	-	161194161	161194161	8553170	2	60,287,	0,1303,
#Deleted in new
chr1	161195978	161199053	chr1:161195978-161199053	1	-	161196493	161198627	789624	2	902,1059,	0,2016,
#Partially deleted in new
chr1	161197103	161206593	chr1:161197103-161206593	0	+	161197103	161197103	8553170	4	53,334,107,187,	0,5043,6333,9303,
#Partially deleted in new
chr1	161197418	161209306	chr1:161197418-161209306	0	+	161197418	161197418	8553170	5	69,334,107,191,114,	0,4728,6018,8988,11774,
#Partially deleted in new
chr1	161199314	161214395	chr1:161199314-161214395	3	+	161202385	161214193	0	15	209,334,107,191,121,113,75,78,86,120,130,96,84,58,240,	0,2832,4122,7092,9878,10168,10542,10796,10989,11276,13036,14065,14334,14549,14841,
#Partially deleted in new
chr1	161202045	161209516	chr1:161202045-161209516	0	+	161202045	161202045	8553170	5	435,107,191,121,34,	0,1391,4361,7147,7437,
#Partially deleted in new
chr1	161202146	161214392	chr1:161202146-161214392	1	+	161202385	161213941	0	13	334,107,191,121,113,75,78,86,120,130,96,84,529,	0,1290,4260,7046,7336,7710,7964,8157,8444,10204,11233,11502,11717,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	161202371	161203833	chr1:161202371-161203833	0	+	161202371	161202371	8553170	2	109,397,	0,1065,
#Partially deleted in new
chr1	161202375	161210474	chr1:161202375-161210474	0	+	161202375	161202375	8553170	7	105,107,191,121,113,75,364,	0,1061,4031,6817,7107,7481,7735,
#Partially deleted in new
chr1	161206408	161209727	chr1:161206408-161209727	0	+	161206408	161206408	8553170	3	189,121,245,	0,2784,3074,
#Partially deleted in new
chr1	161209482	161213412	chr1:161209482-161213412	0	+	161209482	161209482	8553170	5	113,75,600,130,33,	0,374,628,2868,3897,
#Partially deleted in new
chr1	161209864	161214395	chr1:161209864-161214395	0	+	161209864	161209864	8553170	8	67,78,86,120,130,96,84,532,	0,246,439,726,2486,3515,3784,3999,
#Partially deleted in new
chr1	161210674	161214296	chr1:161210674-161214296	0	+	161210674	161210674	8553170	4	36,130,96,648,	0,1676,2705,2974,
#Partially deleted in new
chr1	161213249	161213979	chr1:161213249-161213979	0	+	161213249	161213249	8553170	3	226,84,116,	0,399,614,
#Partially deleted in new
chr1	161215233	161219248	chr1:161215233-161219248	0	+	161215233	161215233	8553170	4	137,36,21,368,	0,3007,3469,3647,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	161215278	161220699	chr1:161215278-161220699	1	+	161215321	161220530	789624	5	92,92,36,21,310,	0,2707,2962,3424,5111,
#Partially deleted in new
chr1	161215296	161219248	chr1:161215296-161219248	3	+	161215321	161218943	789624	5	74,92,36,21,368,	0,2689,2944,3406,3584,
#Deleted in new
chr1	161222291	161223628	chr1:161222291-161223628	3	-	161222404	161223401	789624	4	231,133,76,34,	0,626,1058,1303,
#Deleted in new
chr1	161222291	161223631	chr1:161222291-161223631	1	-	161222404	161222958	789624	3	231,133,37,	0,626,1303,
#Deleted in new
chr1	161222291	161223631	chr1:161222291-161223631	1	-	161222404	161222958	789624	4	231,77,76,37,	0,626,1058,1303,
#Deleted in new
chr1	161222291	161223613	chr1:161222291-161223613	0	-	161222291	161222291	8553170	2	231,696,	0,626,
#Deleted in new
chr1	161222292	161223425	chr1:161222292-161223425	0	-	161223099	161223401	789624	3	230,349,76,	0,625,1057,
#Deleted in new
chr1	161222295	161223628	chr1:161222295-161223628	1	-	161222404	161223401	789624	5	158,15,133,76,34,	0,212,622,1054,1299,
#Deleted in new
chr1	161222315	161223615	chr1:161222315-161223615	1	-	161222404	161223576	789624	4	207,133,76,114,	0,602,1034,1186,
#Deleted in new
chr1	161222318	161223408	chr1:161222318-161223408	1	-	161222490	161223401	789624	2	204,59,	0,1031,
#Deleted in new
chr1	161222422	161223585	chr1:161222422-161223585	0	-	161222422	161223401	789624	3	100,133,236,	0,495,927,
#Deleted in new
chr1	161222507	161223559	chr1:161222507-161223559	0	-	161222507	161223401	789624	4	15,133,76,41,	0,410,842,1011,
#Deleted in new
chr1	161225938	161230744	chr1:161225938-161230744	1	+	161226489	161229095	789624	9	198,250,68,93,106,123,77,103,1789,	0,416,949,1319,1945,2247,2489,2776,3017,
#Deleted in new
chr1	161226002	161230607	chr1:161226002-161230607	3	+	161226489	161229095	789624	10	134,250,68,93,102,106,123,77,103,1652,	0,352,885,1255,1633,1881,2183,2425,2712,2953,
#Deleted in new
chr1	161226059	161230615	chr1:161226059-161230615	0	+	161226059	161226059	8553170	7	77,250,106,123,77,103,1660,	0,295,1824,2126,2368,2655,2896,
#Deleted in new
chr1	161226062	161228787	chr1:161226062-161228787	0	+	161226062	161226062	8553170	9	74,129,68,93,102,106,123,77,73,	0,413,825,1195,1573,1821,2123,2365,2652,
#Deleted in new
chr1	161226072	161228273	chr1:161226072-161228273	0	+	161226072	161226072	8553170	6	64,250,68,93,106,88,	0,282,815,1185,1811,2113,
#Deleted in new
chr1	161226081	161229293	chr1:161226081-161229293	0	+	161226081	161226081	8553170	8	55,250,68,106,123,77,103,338,	0,273,806,1802,2104,2346,2633,2874,
#Deleted in new
chr1	161226303	161230618	chr1:161226303-161230618	1	+	161226489	161229095	789624	9	301,68,93,102,106,123,77,103,1663,	0,584,954,1332,1580,1882,2124,2411,2652,
#Deleted in new
chr1	161227185	161227261	chr1:161227185-161227261	3	+	161227185	161227185	5263520	1	76,	0,
#Deleted in new
chr1	161227883	161228503	chr1:161227883-161228503	0	+	161227883	161227883	8553170	2	106,318,	0,302,
#Deleted in new
chr1	161228429	161229054	chr1:161228429-161229054	0	+	161228429	161228429	8553170	2	388,99,	0,526,
#Partially deleted in new
chr1	161229665	161238302	chr1:161229665-161238302	3	-	161229796	161236565	0	9	261,106,117,146,140,170,131,140,262,	0,1147,1451,1663,3141,3503,6181,6793,8375,
#Partially deleted in new
chr1	161229665	161238101	chr1:161229665-161238101	1	-	161229681	161238060	0	7	107,106,146,140,170,131,61,	0,1147,1663,3141,3503,6181,8375,
#Partially deleted in new
chr1	161229669	161232862	chr1:161229669-161232862	0	-	161229669	161229669	8553170	4	257,121,146,56,	0,1143,1659,3137,
#Partially deleted in new
chr1	161229670	161238210	chr1:161229670-161238210	1	-	161229796	161236565	0	9	256,121,129,146,140,170,131,140,170,	0,1142,1446,1658,3136,3498,6176,6788,8370,
#Partially deleted in new
chr1	161229670	161238101	chr1:161229670-161238101	1	-	161229681	161238060	0	8	102,106,117,146,140,170,131,61,	0,1142,1446,1658,3136,3498,6176,8370,
#Deleted in new
chr1	161229670	161231219	chr1:161229670-161231219	0	-	161229670	161229670	8553170	3	256,121,103,	0,1142,1446,
#Partially deleted in new
chr1	161229675	161238210	chr1:161229675-161238210	1	-	161232824	161236565	789624	8	251,106,117,146,140,131,140,170,	0,1137,1441,1653,3131,6171,6783,8365,
#Deleted in new
chr1	161229679	161231329	chr1:161229679-161231329	0	-	161229679	161229679	8553170	2	247,517,	0,1133,
#Partially deleted in new
chr1	161229681	161238101	chr1:161229681-161238101	1	-	161229681	161238060	0	8	91,121,129,146,140,170,131,61,	0,1131,1435,1647,3125,3487,6165,8359,
#Partially deleted in new
chr1	161229681	161238101	chr1:161229681-161238101	1	-	161229681	161236565	0	9	91,121,117,146,140,170,131,140,61,	0,1131,1435,1647,3125,3487,6165,6777,8359,
#Partially deleted in new
chr1	161229681	161238101	chr1:161229681-161238101	1	-	161229681	161236565	0	9	91,106,129,146,140,170,131,140,61,	0,1131,1435,1647,3125,3487,6165,6777,8359,
#Partially deleted in new
chr1	161229681	161238101	chr1:161229681-161238101	1	-	161229681	161236565	0	8	91,106,146,140,170,131,140,61,	0,1131,1647,3125,3487,6165,6777,8359,
#Partially deleted in new
chr1	161229681	161238101	chr1:161229681-161238101	1	-	161229681	161238060	0	8	91,121,117,146,140,170,131,61,	0,1131,1435,1647,3125,3487,6165,8359,
#Partially deleted in new
chr1	161229689	161238163	chr1:161229689-161238163	1	-	161229796	161236565	0	9	237,106,129,146,140,170,131,140,123,	0,1123,1427,1639,3117,3479,6157,6769,8351,
#Partially deleted in new
chr1	161229689	161238163	chr1:161229689-161238163	0	-	161231027	161238060	789624	7	237,433,146,140,170,131,123,	0,1123,1639,3117,3479,6157,8351,
#Partially deleted in new
chr1	161229736	161238101	chr1:161229736-161238101	1	-	161229796	161238060	0	8	190,121,117,146,140,170,131,61,	0,1076,1380,1592,3070,3432,6110,8304,
#Partially deleted in new
chr1	161229736	161238101	chr1:161229736-161238101	0	-	161232824	161236565	789624	7	190,106,146,140,131,140,61,	0,1076,1592,3070,6110,6722,8304,
#Partially deleted in new
chr1	161229736	161238101	chr1:161229736-161238101	1	-	161230858	161236565	789624	6	190,106,146,131,140,61,	0,1076,1592,6110,6722,8304,
#Partially deleted in new
chr1	161229736	161238101	chr1:161229736-161238101	1	-	161229796	161238060	0	7	190,106,146,140,170,131,61,	0,1076,1592,3070,3432,6110,8304,
#Partially deleted in new
chr1	161229736	161238101	chr1:161229736-161238101	0	-	161232824	161238060	789624	6	36,106,146,140,131,61,	0,1076,1592,3070,6110,8304,
#Partially deleted in new
chr1	161229736	161238101	chr1:161229736-161238101	1	-	161230858	161238060	789624	5	190,106,146,131,61,	0,1076,1592,6110,8304,
#Partially deleted in new
chr1	161229736	161238101	chr1:161229736-161238101	0	-	161232824	161238060	789624	6	190,106,146,140,131,61,	0,1076,1592,3070,6110,8304,
#Partially deleted in new
chr1	161229736	161238101	chr1:161229736-161238101	1	-	161229796	161238060	0	8	190,106,117,146,140,170,131,61,	0,1076,1380,1592,3070,3432,6110,8304,
#Partially deleted in new
chr1	161229736	161238101	chr1:161229736-161238101	1	-	161230858	161238060	789624	5	36,106,146,131,61,	0,1076,1592,6110,8304,
#Partially deleted in new
chr1	161229736	161238101	chr1:161229736-161238101	1	-	161230858	161236565	789624	6	36,106,146,131,140,61,	0,1076,1592,6110,6722,8304,
#Partially deleted in new
chr1	161229736	161238101	chr1:161229736-161238101	0	-	161232824	161238060	789624	7	190,106,117,146,140,131,61,	0,1076,1380,1592,3070,6110,8304,
#Partially deleted in new
chr1	161229736	161238101	chr1:161229736-161238101	1	-	161229796	161235859	789624	9	190,106,117,146,140,170,131,69,61,	0,1076,1380,1592,3070,3432,6110,6793,8304,
#Partially deleted in new
chr1	161229771	161238111	chr1:161229771-161238111	1	-	161229796	161236565	0	8	155,106,146,140,170,131,140,71,	0,1041,1557,3035,3397,6075,6687,8269,
#Partially deleted in new
chr1	161229771	161238111	chr1:161229771-161238111	1	-	161229796	161236565	0	8	155,121,146,140,170,131,140,71,	0,1041,1557,3035,3397,6075,6687,8269,
#Partially deleted in new
chr1	161229796	161236565	chr1:161229796-161236565	1	-	161229796	161236565	0	8	130,121,129,146,140,170,131,107,	0,1016,1320,1532,3010,3372,6050,6662,
#Partially deleted in new
chr1	161230344	161238203	chr1:161230344-161238203	1	-	161230748	161238060	789624	7	574,117,146,140,170,131,163,	0,772,984,2462,2824,5502,7696,
#Partially deleted in new
chr1	161230930	161238090	chr1:161230930-161238090	0	-	161230930	161230930	8553170	4	544,140,131,50,	0,1876,4916,7110,
#Partially deleted in new
chr1	161231166	161238244	chr1:161231166-161238244	1	-	161231305	161236565	789624	6	308,140,170,131,140,204,	0,1640,2002,4680,5292,6874,
#Partially deleted in new
chr1	161231260	161238090	chr1:161231260-161238090	0	-	161231260	161231260	8553170	4	214,140,131,50,	0,1546,4586,6780,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	161235256	161238133	chr1:161235256-161238133	0	-	161235256	161235256	8553170	2	1342,93,	0,2784,
#Partially deleted in new
chr1	161258726	161285450	chr1:161258726-161285450	3	+	161258974	161284481	789624	3	257,55,1112,	0,24941,25612,
#Partially deleted in new
chr1	161304734	161309954	chr1:161304734-161309954	0	-	161305875	161309905	0	7	555,444,61,136,214,167,116,	0,799,1373,1594,1973,2523,5104,
#Partially deleted in new
chr1	161304734	161309972	chr1:161304734-161309972	3	-	161305875	161309905	0	6	1243,61,136,214,167,134,	0,1373,1594,1973,2523,5104,
#Deleted in new
chr1	161304778	161307471	chr1:161304778-161307471	1	-	161305875	161306164	789624	5	1199,61,136,214,214,	0,1329,1550,1929,2479,
#Deleted in new
chr1	161305328	161306899	chr1:161305328-161306899	0	-	161305875	161306899	789624	4	649,61,136,111,	0,779,1000,1460,
#Deleted in new
chr1	161305334	161306372	chr1:161305334-161306372	0	-	161305334	161305334	8553170	2	834,44,	0,994,
#Deleted in new
chr1	161305694	161306190	chr1:161305694-161306190	0	-	161305694	161305694	8553170	2	283,83,	0,413,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	161314256	161375340	chr1:161314256-161375340	3	+	161314405	161362433	789624	6	169,57,102,62,164,13012,	0,9357,14139,26337,42420,48072,
#Partially deleted in new
chr1	161314380	161363189	chr1:161314380-161363189	1	+	161314405	161362540	789624	5	45,57,102,62,861,	0,9233,14015,26213,47948,
#Partially deleted in new
chr1	161314380	161328495	chr1:161314380-161328495	0	+	161314380	161314380	8553170	3	494,57,100,	0,9233,14015,
#Partially deleted in new
chr1	161314381	161362461	chr1:161314381-161362461	1	+	161314405	161362433	789624	5	44,57,62,164,133,	0,9232,26212,42295,47947,
#Partially deleted in new
chr1	161314387	161362433	chr1:161314387-161362433	1	+	161314405	161362433	789624	4	38,62,164,105,	0,26206,42289,47941,
#Partially deleted in new
chr1	161314387	161362540	chr1:161314387-161362540	1	+	161314405	161362540	789624	4	38,57,62,212,	0,9226,26206,47941,
#Partially deleted in new
chr1	161314390	161362452	chr1:161314390-161362452	0	+	161314405	161339586	789624	7	35,57,102,27,62,164,124,	0,9223,14005,25171,26203,42286,47938,
#Partially deleted in new
chr1	161364730	161367874	chr1:161364730-161367874	3	-	161364964	161367868	789624	5	420,177,81,63,33,	0,795,1467,1708,3111,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	161368021	161371964	chr1:161368021-161371964	0	+	161368021	161368021	8553170	2	1138,669,	0,3274,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	161378706	161379358	chr1:161378706-161379358	7	-	161378706	161378706	16724991	1	652,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	161399408	161422424	chr1:161399408-161422424	3	+	161399408	161399408	8553170	2	504,493,	0,22523,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	161401288	161401395	chr1:161401288-161401395	3	+	161401288	161401288	8553170	1	107,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	161403408	161470523	chr1:161403408-161470523	3	-	161403408	161403408	8553170	5	218,220,177,194,54,	0,16260,16814,24417,67061,
#Partially deleted in new
chr1	161406067	161407082	chr1:161406067-161407082	7	+	161406067	161406067	16724991	2	274,610,	0,405,
#Deleted in new
chr1	161411596	161411802	chr1:161411596-161411802	7	-	161411596	161411596	16724991	1	206,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	161433443	161440996	chr1:161433443-161440996	3	-	161433443	161433443	8553170	2	452,117,	0,7436,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	161505429	161519568	chr1:161505429-161519568	1	+	161505467	161518148	0	7	123,21,258,255,123,38,1594,	0,557,904,4390,5404,8465,12545,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	161505429	161518558	chr1:161505429-161518558	3	+	161505467	161518148	0	7	123,21,255,255,123,38,584,	0,557,907,4390,5404,8465,12545,
#Partially deleted in new
chr1	161505445	161510350	chr1:161505445-161510350	0	+	161505445	161505445	8553170	4	107,21,255,531,	0,541,891,4374,
#Deleted in new
chr1	161505452	161506368	chr1:161505452-161506368	0	+	161505452	161505452	8553170	2	555,32,	0,884,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	161505456	161518565	chr1:161505456-161518565	0	+	161505467	161506641	789624	7	96,21,371,255,123,38,591,	0,530,880,4363,5377,8438,12518,
#Partially deleted in new
chr1	161505456	161509899	chr1:161505456-161509899	0	+	161505467	161506641	789624	4	96,21,374,80,	0,530,877,4363,
#Deleted in new
chr1	161505458	161506449	chr1:161505458-161506449	0	+	161505458	161505458	8553170	2	94,463,	0,528,
#Deleted in new
chr1	161505867	161506640	chr1:161505867-161506640	0	+	161505867	161505867	8553170	2	140,304,	0,469,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	161506332	161524013	chr1:161506332-161524013	0	+	161506332	161510899	789624	6	259,255,116,163,125,724,	0,3487,4508,11642,13256,16957,
#Partially deleted in new
chr1	161506650	161518355	chr1:161506650-161518355	0	+	161506650	161506650	8553170	4	57,255,38,381,	0,3169,7244,11324,
#Partially deleted in new
chr1	161513175	161605099	chr1:161513175-161605099	3	+	161513175	161513175	8553170	5	70,38,163,125,157,	0,719,4799,88064,91767,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	161513376	161518590	chr1:161513376-161518590	0	+	161513376	161513376	8553170	3	151,38,616,	0,518,4598,
#Partially deleted in new
chr1	161513897	161519967	chr1:161513897-161519967	0	+	161513897	161519967	789624	3	35,163,61,	0,4077,6009,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	161514619	161518603	chr1:161514619-161518603	0	+	161514619	161514619	8553170	2	255,629,	0,3355,
#Partially deleted in new
chr1	161517974	161523099	chr1:161517974-161523099	0	+	161517974	161517974	8553170	4	163,72,190,305,	0,1614,1827,4820,
#Deleted in new
chr1	161524539	161526910	chr1:161524539-161526910	3	+	161524658	161526590	0	1	2371,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	161536570	161538158	chr1:161536570-161538158	7	-	161536570	161536570	16724991	3	130,112,244,	0,1171,1344,
#Partially deleted in new
chr1	161541758	161550103	chr1:161541758-161550103	1	-	161543011	161550051	789624	5	1441,258,258,21,407,	0,2942,6662,7252,7938,
#Partially deleted in new
chr1	161541762	161550028	chr1:161541762-161550028	1	-	161543011	161549736	0	5	1437,258,258,21,332,	0,2938,6658,7248,7934,
#Partially deleted in new
chr1	161541764	161550623	chr1:161541764-161550623	1	-	161543011	161549736	0	6	1435,258,258,21,102,93,	0,2936,6656,7246,7932,8766,
#Partially deleted in new
chr1	161541795	161550591	chr1:161541795-161550591	1	-	161543011	161549736	0	6	1404,258,258,21,84,61,	0,2905,6625,7215,7901,8735,
#Partially deleted in new
chr1	161541854	161549898	chr1:161541854-161549898	0	-	161543011	161549898	0	5	1345,258,255,21,202,	0,2846,6566,7156,7842,
#Partially deleted in new
chr1	161543011	161549844	chr1:161543011-161549844	3	-	161543011	161549844	789624	5	188,258,258,21,148,	0,1689,5409,5999,6685,
#Partially deleted in new
chr1	161545398	161549730	chr1:161545398-161549730	0	-	161545398	161545398	8553170	4	378,258,21,34,	0,3022,3612,4298,
#Deleted in new
chr1	161548420	161550737	chr1:161548420-161550737	0	-	161548420	161549736	789624	4	255,21,84,102,	0,590,1276,2215,
#Partially deleted in new
chr1	161581338	161589886	chr1:161581338-161589886	0	+	161581338	161581338	8553170	3	211,21,322,	0,7083,8226,
#Partially deleted in new
chr1	161581338	161589697	chr1:161581338-161589697	0	+	161581338	161581338	8553170	5	211,104,94,21,136,	0,1751,2382,7083,8223,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	161581338	161600242	chr1:161581338-161600242	3	+	161581437	161599803	789624	8	211,21,35,220,255,114,38,613,	0,7083,8223,8261,9805,10790,14214,18291,
#Partially deleted in new
chr1	161581339	161599803	chr1:161581339-161599803	1	+	161581437	161599803	8553170	7	210,21,258,255,114,38,174,	0,7082,8222,9804,10789,14213,18290,
#Partially deleted in new
chr1	161581345	161591291	chr1:161581345-161591291	0	+	161581345	161581345	8553170	5	204,21,258,138,148,	0,7076,8216,8735,9798,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	161581360	161596243	chr1:161581360-161596243	0	+	161581360	161581360	8553170	7	189,104,21,258,255,114,691,	0,1729,7061,8201,9783,10768,14192,
#Partially deleted in new
chr1	161581435	161599828	chr1:161581435-161599828	1	+	161581437	161599673	789624	7	114,21,35,220,255,114,199,	0,6986,8126,8164,9708,10693,18194,
#Partially deleted in new
chr1	161583211	161591297	chr1:161583211-161591297	0	+	161583211	161583211	8553170	5	40,94,21,258,154,	0,509,5210,6350,7932,
#Partially deleted in new
chr1	161583720	161591300	chr1:161583720-161591300	0	+	161583720	161583720	8553170	4	94,21,255,157,	0,4701,5844,7423,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	161592149	161605662	chr1:161592149-161605662	0	+	161592149	161592149	8553170	4	93,163,125,720,	0,7480,9090,12793,
#Partially deleted in new
chr1	161594834	161605099	chr1:161594834-161605099	0	+	161594834	161594834	8553170	5	70,38,163,125,157,	0,718,4795,6405,10108,
#Partially deleted in new
chr1	161599570	161605137	chr1:161599570-161605137	0	+	161599570	161599570	8553170	3	222,125,195,	0,1669,5372,
#Deleted in new
chr1	161606290	161608217	chr1:161606290-161608217	7	+	161606290	161606290	16724991	1	1927,	0,
#Partially deleted in new
chr1	161617991	161619585	chr1:161617991-161619585	7	-	161617991	161617991	16724991	3	133,100,205,	0,1211,1389,
#Partially deleted in new
chr1	161623195	161631963	chr1:161623195-161631963	3	-	161624514	161631094	789624	6	1444,258,258,21,84,78,	0,2949,6582,7172,7859,8690,
#Partially deleted in new
chr1	161623195	161631176	chr1:161623195-161631176	1	-	161624514	161631094	8553170	5	1444,258,258,21,122,	0,2949,6582,7172,7859,
#Partially deleted in new
chr1	161623199	161631462	chr1:161623199-161631462	1	-	161624514	161631094	789624	5	1440,258,258,21,408,	0,2945,6578,7168,7855,
#Partially deleted in new
chr1	161623199	161631047	chr1:161623199-161631047	1	-	161624514	161630377	789624	5	1440,258,258,21,274,	0,2945,6578,7168,7574,
#Partially deleted in new
chr1	161623199	161631047	chr1:161623199-161631047	1	-	161624514	161630377	789624	4	1440,258,21,274,	0,6578,7168,7574,
#Partially deleted in new
chr1	161623989	161631456	chr1:161623989-161631456	1	-	161624514	161631202	789624	5	650,258,258,21,402,	0,2155,5788,6378,7065,
#Partially deleted in new
chr1	161624222	161631158	chr1:161624222-161631158	0	-	161624514	161631158	789624	5	417,258,255,21,104,	0,1922,5555,6145,6832,
#Partially deleted in new
chr1	161626306	161630250	chr1:161626306-161630250	0	-	161626306	161626306	8553170	2	96,473,	0,3471,
#Partially deleted in new
chr1	161626356	161631032	chr1:161626356-161631032	0	-	161626356	161630377	789624	4	46,258,21,259,	0,3421,4011,4417,
#Deleted in new
chr1	161629889	161631126	chr1:161629889-161631126	0	-	161629889	161629889	8553170	2	499,72,	0,1165,
#Partially deleted in new
chr1	161663146	161678022	chr1:161663146-161678022	1	+	161663241	161677553	0	7	207,21,258,255,114,38,547,	0,7105,8245,9828,10813,14181,14329,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	161663160	161678654	chr1:161663160-161678654	3	+	161663241	161677553	0	8	193,21,258,255,114,57,38,1179,	0,7091,8231,9814,10799,12096,14167,14315,
#Partially deleted in new
chr1	161663160	161678032	chr1:161663160-161678032	1	+	161663241	161677553	0	7	193,258,255,114,57,38,557,	0,8231,9814,10799,12096,14167,14315,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	161663191	161678053	chr1:161663191-161678053	0	+	161663191	161663191	8553170	6	162,21,258,255,3406,578,	0,7060,8200,9783,10768,14284,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	161663198	161674116	chr1:161663198-161674116	0	+	161663198	161663198	8553170	4	155,21,1838,157,	0,7053,8193,10761,
#Partially deleted in new
chr1	161671977	161674824	chr1:161671977-161674824	3	-	161671977	161671977	8553170	3	172,25,197,	0,281,2650,
#Partially deleted in new
chr1	161673429	161674764	chr1:161673429-161674764	0	-	161673429	161673429	8553170	2	621,137,	0,1198,
#Deleted in new
chr1	161683694	161685252	chr1:161683694-161685252	7	-	161683694	161683694	16724991	1	1558,	0,
#Deleted in new
chr1	161684837	161685209	chr1:161684837-161685209	5	-	161684837	161684837	16724991	1	372,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	161699505	161699607	chr1:161699505-161699607	3	+	161699505	161699505	8553170	1	102,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	161706971	161714348	chr1:161706971-161714348	3	+	161707213	161713380	789624	5	372,153,267,285,1264,	0,3788,4236,4962,6113,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	161706971	161714351	chr1:161706971-161714351	1	+	161707213	161713380	789624	2	372,1267,	0,6113,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	161706971	161714351	chr1:161706971-161714351	1	+	161707213	161713380	789624	3	372,153,1267,	0,3788,6113,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	161706971	161714351	chr1:161706971-161714351	1	+	161707213	161713380	789624	6	372,18,153,267,285,1267,	0,3503,3788,4236,4962,6113,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	161706971	161714351	chr1:161706971-161714351	1	+	161707213	161713380	789624	4	372,18,285,1267,	0,3503,4962,6113,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	161706971	161714351	chr1:161706971-161714351	1	+	161707213	161713380	789624	4	372,153,285,1267,	0,3788,4962,6113,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	161707208	161714348	chr1:161707208-161714348	1	+	161707213	161713380	789624	3	135,285,1264,	0,4725,5876,
#Partially deleted in new
chr1	161707238	161711472	chr1:161707238-161711472	0	+	161707238	161707238	8553170	4	105,53,104,265,	0,3201,3521,3969,
#Partially deleted in new
chr1	161707243	161713452	chr1:161707243-161713452	1	+	161707264	161713380	789624	4	100,153,267,368,	0,3516,3964,5841,
#Partially deleted in new
chr1	161707264	161713468	chr1:161707264-161713468	1	+	161707264	161713380	789624	4	79,18,285,384,	0,3210,4669,5820,
#Partially deleted in new
chr1	161707264	161713468	chr1:161707264-161713468	1	+	161707264	161713380	789624	4	79,153,285,384,	0,3495,4669,5820,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	161707264	161714348	chr1:161707264-161714348	1	+	161707264	161713380	789624	6	79,18,153,267,285,1264,	0,3210,3495,3943,4669,5820,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	161707294	161713705	chr1:161707294-161713705	1	+	161707333	161713380	789624	3	49,153,621,	0,3465,5790,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	161710288	161714352	chr1:161710288-161714352	0	+	161710288	161710288	8553170	3	624,1011,1268,	0,919,2796,
#Partially deleted in new
chr1	161721562	161728143	chr1:161721562-161728143	3	+	161722672	161727662	789624	8	99,96,51,21,255,267,291,897,	0,192,1090,1426,1804,4258,5140,5684,
#Partially deleted in new
chr1	161722658	161727664	chr1:161722658-161727664	1	+	161722672	161727313	789624	6	45,21,255,267,187,418,	0,330,708,3162,4148,4588,
#Partially deleted in new
chr1	161722658	161727664	chr1:161722658-161727664	1	+	161722672	161727313	789624	5	45,255,267,187,418,	0,708,3162,4148,4588,
#Partially deleted in new
chr1	161722658	161727664	chr1:161722658-161727664	1	+	161722672	161727483	789624	5	45,255,267,146,418,	0,708,3162,4189,4588,
#Partially deleted in new
chr1	161722658	161727664	chr1:161722658-161727664	1	+	161722672	161727483	789624	6	45,21,255,267,146,418,	0,330,708,3162,4189,4588,
#Partially deleted in new
chr1	161725900	161728142	chr1:161725900-161728142	0	+	161725900	161725900	8553170	2	1093,896,	0,1346,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	161735807	161736102	chr1:161735807-161736102	3	+	161735807	161735807	8553170	1	295,	0,
#Partially deleted in new
chr1	161749757	161757238	chr1:161749757-161757238	0	+	161749801	161751724	789624	5	388,127,97,187,453,	0,1897,2610,3317,7028,
#Partially deleted in new
chr1	161749769	161757162	chr1:161749769-161757162	3	+	161749801	161756947	0	6	376,114,119,97,187,377,	0,1898,2096,2598,3305,7016,
#Partially deleted in new
chr1	161749779	161753105	chr1:161749779-161753105	0	+	161749801	161751724	789624	5	366,127,119,97,31,	0,1875,2086,2588,3295,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	161749804	161751781	chr1:161749804-161751781	0	+	161749879	161751171	789624	3	284,246,127,	0,1327,1850,
#Partially deleted in new
chr1	161752398	161753406	chr1:161752398-161753406	0	+	161752398	161752398	8553170	2	66,332,	0,676,
#Deleted in new
chr1	161765324	161766227	chr1:161765324-161766227	3	-	161765324	161765324	8553170	2	177,398,	0,505,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	161766293	161964070	chr1:161766293-161964070	3	+	161766360	161958654	789624	16	149,77,88,107,130,204,221,186,92,132,114,100,71,115,85,5625,	0,11950,15618,17696,25114,25830,35758,53339,54776,80155,85428,86930,93913,96904,146002,192152,
#Partially deleted in new
chr1	161840074	161860244	chr1:161840074-161860244	0	+	161840074	161840074	8553170	5	394,132,114,100,38,	0,6374,11647,13149,20132,
#Deleted in new
chr1	161890832	161892196	chr1:161890832-161892196	7	+	161890832	161890832	16724991	1	1364,	0,
#Deleted in new
chr1	161890939	161891680	chr1:161890939-161891680	5	+	161890939	161890939	16724991	1	741,	0,
#Partially deleted in new
chr1	161983191	162023854	chr1:161983191-162023854	3	-	161983674	162023430	789624	8	1085,177,525,226,177,108,264,598,	0,1612,14633,16921,23105,34208,36727,40065,
#Deleted in new
chr1	161983191	161983947	chr1:161983191-161983947	0	-	161983674	161983947	789624	2	144,352,	0,404,
#Deleted in new
chr1	161983192	161983941	chr1:161983192-161983941	0	-	161983674	161983941	789624	2	213,346,	0,403,
#Partially deleted in new
chr1	161983455	162023640	chr1:161983455-162023640	1	-	161983674	162023430	789624	8	821,177,525,229,177,108,264,384,	0,1348,14369,16657,22841,33944,36463,39801,
#Deleted in new
chr1	161983552	161985232	chr1:161983552-161985232	1	-	161983674	161984903	789624	2	724,429,	0,1251,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	162039015	162039567	chr1:162039015-162039567	3	+	162039015	162039015	8553170	2	228,225,	0,327,
#Partially deleted in new
chr1	162069773	162368451	chr1:162069773-162368451	3	+	162070177	162367467	789624	10	509,72,93,59,109,142,167,177,166,1400,	0,84631,217570,230874,263243,274061,285413,287186,295630,297278,
#Partially deleted in new
chr1	162069775	162370475	chr1:162069775-162370475	1	+	162070177	162367467	789624	10	507,72,93,74,109,142,167,177,166,3424,	0,84629,217568,230857,263241,274059,285411,287184,295628,297276,
#Partially deleted in new
chr1	162070089	162367492	chr1:162070089-162367492	0	+	162070177	162365416	789624	11	193,72,93,59,109,142,167,177,113,166,441,	0,84315,217254,230558,262927,273745,285097,286870,290722,295314,296962,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	162146708	162174860	chr1:162146708-162174860	3	-	162146708	162146708	8553170	4	1010,197,138,103,	0,21573,25018,28049,
#Deleted in new
chr1	162157106	162157182	chr1:162157106-162157182	3	+	162157106	162157106	5263520	1	76,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	162316851	162317794	chr1:162316851-162317794	3	-	162316851	162316851	8553170	2	469,48,	0,895,
#Deleted in new
chr1	162338642	162338742	chr1:162338642-162338742	7	+	162338642	162338642	16724991	1	100,	0,
#Deleted in new
chr1	162342545	162342640	chr1:162342545-162342640	3	+	162342545	162342545	5263520	1	95,	0,
#Partially deleted in new
chr1	162360536	162367221	chr1:162360536-162367221	0	+	162365496	162367221	789624	3	388,166,170,	0,4867,6515,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	162362982	162370023	chr1:162362982-162370023	1	+	162365349	162367467	789624	2	2587,2972,	0,4069,
#Partially deleted in new
chr1	162365406	162382115	chr1:162365406-162382115	2	+	162365496	162382115	789624	3	163,153,225,	0,1645,16484,
#Deleted in new
chr1	162366903	162367519	chr1:162366903-162367519	0	+	162366903	162366903	8553170	2	29,468,	0,148,
#Partially deleted in new
chr1	162366907	162383377	chr1:162366907-162383377	0	+	162381901	162383377	789624	4	25,153,328,196,	0,144,14983,16274,
#Partially deleted in new
chr1	162367311	162383531	chr1:162367311-162383531	1	+	162367311	162381894	789624	3	152,328,350,	0,14579,15870,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	162373202	162376870	chr1:162373202-162376870	3	-	162374047	162376790	789624	3	1414,114,183,	0,2087,3485,
#Partially deleted in new
chr1	162374443	162376808	chr1:162374443-162376808	0	-	162376667	162376790	789624	2	173,274,	0,2091,
#Deleted in new
chr1	162378840	162383711	chr1:162378840-162383711	3	+	162378913	162383683	789624	3	191,328,530,	0,3050,4341,
#Deleted in new
chr1	162381729	162386818	chr1:162381729-162386818	1	+	162381901	162383683	789624	2	489,3637,	0,1452,
#Partially deleted in new
chr1	162395265	162412126	chr1:162395265-162412126	3	-	162397279	162412016	0	4	2050,165,64,244,	0,3657,7473,16617,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	162402476	162412138	chr1:162402476-162412138	0	-	162402476	162402476	8553170	2	326,256,	0,9406,
#Deleted in new
chr1	162445548	162446566	chr1:162445548-162446566	7	+	162445548	162445548	16724991	2	333,269,	0,749,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	162497250	162529629	chr1:162497250-162529629	1	+	162497250	162522550	789624	8	46,293,192,95,77,99,89,7226,	0,2704,3662,6503,15249,15474,20851,25153,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	162497804	162529629	chr1:162497804-162529629	1	+	162498000	162522414	789624	7	464,293,192,95,77,99,7226,	0,2150,3108,5949,14695,14920,24599,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	162497842	162529610	chr1:162497842-162529610	3	+	162498000	162522550	789624	8	426,293,192,95,77,99,89,7207,	0,2112,3070,5911,14657,14882,20259,24561,
#Partially deleted in new
chr1	162498084	162524054	chr1:162498084-162524054	0	+	162498084	162498084	8553170	7	184,1150,95,77,99,89,1651,	0,1870,5669,14415,14640,20017,24319,
#Deleted in new
chr1	162541331	162541628	chr1:162541331-162541628	7	-	162541331	162541331	16724991	1	297,	0,
#Deleted in new
chr1	162560226	162561308	chr1:162560226-162561308	3	-	162560226	162560226	8553170	1	1082,	0,
#Partially deleted in new
chr1	162561505	162599842	chr1:162561505-162599842	3	+	162566068	162599363	0	11	272,337,205,176,173,194,141,189,51,67,572,	0,4506,15271,17922,19781,25969,27187,28817,31226,36286,37765,
#Partially deleted in new
chr1	162561532	162599837	chr1:162561532-162599837	1	+	162566068	162599363	0	10	245,337,205,176,173,194,141,189,67,567,	0,4479,15244,17895,19754,25942,27160,28790,36259,37738,
#Deleted in new
chr1	162561721	162562544	chr1:162561721-162562544	0	+	162561721	162561721	8553170	2	56,72,	0,751,
#Partially deleted in new
chr1	162566036	162599831	chr1:162566036-162599831	1	+	162566068	162599363	0	10	312,205,176,173,194,141,189,48,67,561,	0,10740,13391,15250,21438,22656,24286,26698,31755,33234,
#Partially deleted in new
chr1	162566036	162599831	chr1:162566036-162599831	1	+	162566068	162599363	0	10	312,205,176,173,194,141,189,51,67,561,	0,10740,13391,15250,21438,22656,24286,26695,31755,33234,
#Partially deleted in new
chr1	162581430	162588105	chr1:162581430-162588105	0	+	162581430	162581430	8553170	2	29,631,	0,6044,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	162597240	162599799	chr1:162597240-162599799	0	+	162597240	162597240	8553170	2	618,529,	0,2030,
#Partially deleted in new
chr1	162631372	162780410	chr1:162631372-162780410	1	+	162719063	162780246	789624	18	75,164,109,103,232,148,106,184,244,63,131,211,224,128,192,235,150,299,	0,23838,87664,121722,123251,123783,124291,128423,129838,134628,135856,138929,140651,142096,144279,144763,147207,148739,
#Partially deleted in new
chr1	162632010	162755182	chr1:162632010-162755182	0	+	162719063	162755182	789624	6	83,164,109,103,232,27,	0,23200,87026,121084,122613,123145,
#Partially deleted in new
chr1	162632464	162787400	chr1:162632464-162787400	3	+	162719063	162780246	0	19	167,164,80,109,103,232,148,106,184,244,63,131,211,224,128,192,235,150,7289,	0,22746,72587,86572,120630,122159,122691,123199,127331,128746,133536,134764,137837,139559,141004,143187,143671,146115,147647,
#Partially deleted in new
chr1	162632469	162780421	chr1:162632469-162780421	1	+	162719063	162780246	0	18	162,164,109,103,232,148,106,184,244,63,131,211,224,128,192,235,150,310,	0,22741,86567,120625,122154,122686,123194,127326,128741,133531,134759,137832,139554,140999,143182,143666,146110,147642,
#Deleted in new
chr1	162767236	162770736	chr1:162767236-162770736	0	+	162767236	162770679	789624	2	123,435,	0,3065,
#Deleted in new
chr1	162767289	162772435	chr1:162767289-162772435	0	+	162767289	162772256	789624	3	70,211,412,	0,3012,4734,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	162777729	162778014	chr1:162777729-162778014	3	+	162777729	162777729	8553170	1	285,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	162790701	162812817	chr1:162790701-162812817	0	+	162790701	162790701	8553170	9	134,204,93,1134,195,105,57,99,520,	0,1957,5883,7100,9041,12729,13565,14692,21596,
#Partially deleted in new
chr1	162790720	162799937	chr1:162790720-162799937	0	+	162790720	162790720	8553170	6	115,298,43,93,115,195,	0,1844,4900,5864,7081,9022,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	162790722	162793052	chr1:162790722-162793052	1	+	162790800	162792878	789624	2	113,394,	0,1936,
#Partially deleted in new
chr1	162790732	162799834	chr1:162790732-162799834	0	+	162790800	162796632	789624	6	103,204,43,93,115,92,	0,1926,4888,5852,7069,9010,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	162790745	162812529	chr1:162790745-162812529	3	+	162790800	162812420	789624	9	90,204,93,115,195,105,57,99,232,	0,1913,5839,7056,8997,12685,13521,14648,21552,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	162790788	162812551	chr1:162790788-162812551	0	+	162790788	162790788	8553170	9	47,204,93,2110,118,105,57,99,254,	0,1870,5796,7039,12043,12642,13478,14605,21509,
#Partially deleted in new
chr1	162790800	162797831	chr1:162790800-162797831	1	+	162790800	162797831	789624	4	35,204,93,4,	0,1858,5784,7027,
#Partially deleted in new
chr1	162797185	162799937	chr1:162797185-162799937	0	+	162797185	162797185	8553170	3	402,115,195,	0,616,2557,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	162799503	162804312	chr1:162799503-162804312	0	+	162799503	162799503	8553170	3	434,105,46,	0,3927,4763,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	162799831	162812526	chr1:162799831-162812526	0	+	162799831	162800293	789624	5	106,102,57,99,229,	0,381,4435,5562,12466,
#Deleted in new
chr1	162802917	162804319	chr1:162802917-162804319	0	+	162802917	162802917	8553170	2	618,53,	0,1349,
#Partially deleted in new
chr1	162824457	162855783	chr1:162824457-162855783	0	-	162824457	162824457	8553170	2	724,152,	0,31174,
#Partially deleted in new
chr1	162824794	162849467	chr1:162824794-162849467	7	+	162824794	162824794	16724991	7	202,115,178,82,52,19,31,	0,4308,7755,14340,16068,19341,24642,
#Partially deleted in new
chr1	162854296	162859664	chr1:162854296-162859664	1	-	162854764	162859646	789624	3	1063,127,205,	0,1335,5163,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	162855088	162855946	chr1:162855088-162855946	0	-	162855088	162855088	8553170	2	271,315,	0,543,
#Deleted in new
chr1	162979550	162979793	chr1:162979550-162979793	7	-	162979550	162979550	16724991	1	243,	0,
#Deleted in new
chr1	163068774	163076802	chr1:163068774-163076802	1	+	163068934	163074560	789624	6	218,277,105,62,167,2482,	0,477,3620,4030,4681,5546,
#Deleted in new
chr1	163068934	163073494	chr1:163068934-163073494	0	+	163068934	163068934	8553170	5	80,277,105,62,39,	0,317,3460,3870,4521,
#Deleted in new
chr1	163069144	163076802	chr1:163069144-163076802	3	+	163069484	163074560	789624	5	384,105,62,167,2482,	0,3250,3660,4311,5176,
#Deleted in new
chr1	163069360	163076591	chr1:163069360-163076591	1	+	163069484	163074391	789624	4	168,105,62,2271,	0,3034,3444,4960,
#Deleted in new
chr1	163069360	163074755	chr1:163069360-163074755	1	+	163072404	163074560	789624	5	48,105,62,167,435,	0,3034,3444,4095,4960,
#Deleted in new
chr1	163069360	163074708	chr1:163069360-163074708	1	+	163069484	163074630	789624	5	168,105,62,119,90,	0,3034,3444,4095,5258,
#Deleted in new
chr1	163069362	163076591	chr1:163069362-163076591	0	+	163069362	163069362	8553170	3	166,472,3136,	0,3032,4093,
#Deleted in new
chr1	163070536	163074343	chr1:163070536-163074343	0	+	163070536	163070536	8553170	5	183,105,62,167,23,	0,1858,2268,2919,3784,
#Deleted in new
chr1	163072043	163074816	chr1:163072043-163074816	1	+	163072404	163074560	789624	5	100,105,62,167,496,	0,351,761,1412,2277,
#Deleted in new
chr1	163072145	163074427	chr1:163072145-163074427	0	+	163072404	163074427	789624	5	110,105,62,167,107,	0,249,659,1310,2175,
#Partially deleted in new
chr1	163111120	163152716	chr1:163111120-163152716	0	-	163111120	163111120	8553170	2	197,167,	0,41429,
#Partially deleted in new
chr1	163142298	163321791	chr1:163142298-163321791	1	-	163147341	163152609	0	6	5205,167,62,111,97,170,	0,10251,19616,25959,163934,179323,
#Partially deleted in new
chr1	163142303	163203113	chr1:163142303-163203113	3	-	163147341	163202835	0	5	5200,167,62,111,322,	0,10246,19611,25954,60488,
#Partially deleted in new
chr1	163147055	163217636	chr1:163147055-163217636	1	-	163147341	163217594	789624	6	448,167,62,111,35,111,	0,5494,14859,21202,25502,70470,
#Partially deleted in new
chr1	163147116	163202903	chr1:163147116-163202903	1	-	163147341	163202835	0	5	387,179,62,111,112,	0,5421,14798,21141,55675,
#Partially deleted in new
chr1	163147341	163202835	chr1:163147341-163202835	1	-	163147341	163152609	0	3	162,167,44,	0,5208,55450,
#Partially deleted in new
chr1	163147473	163321735	chr1:163147473-163321735	0	-	163147473	163147473	8553170	6	30,167,62,111,97,114,	0,5076,14441,20784,158759,174148,
#Partially deleted in new
chr1	163152472	163202915	chr1:163152472-163202915	0	-	163152472	163152472	8553170	4	244,62,111,124,	0,9442,15785,50319,
#Partially deleted in new
chr1	163152607	163202898	chr1:163152607-163202898	0	-	163152607	163202835	789624	3	109,62,107,	0,9307,50184,
#Partially deleted in new
chr1	163152609	163321751	chr1:163152609-163321751	0	-	163152609	163152609	8553170	6	107,62,111,69,97,130,	0,9305,15648,95920,153623,169012,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	163152649	163321787	chr1:163152649-163321787	0	-	163152649	163152649	8553170	6	67,62,111,97,88,166,	0,9265,15608,153583,155894,168972,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	163161674	163213023	chr1:163161674-163213023	3	+	163161674	163161674	789624	4	167,91,144,2231,	0,1111,45022,49118,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	163161953	163321772	chr1:163161953-163321772	0	-	163161953	163161953	8553170	6	23,111,97,88,110,151,	0,6304,144279,146590,157228,159668,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	163237213	163239197	chr1:163237213-163239197	7	+	163237213	163237213	16724991	4	153,332,182,466,	0,498,1283,1518,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	163244504	163308577	chr1:163244504-163308577	1	-	163244504	163244504	8553170	4	527,177,97,34,	0,4025,61728,64039,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	163248274	163321792	chr1:163248274-163321792	3	-	163248274	163248274	8553170	4	432,97,88,171,	0,57958,60269,73347,
#Partially deleted in new
chr1	163248318	163321752	chr1:163248318-163321752	0	-	163248318	163248318	8553170	3	388,97,131,	0,57914,73303,
#Partially deleted in new
chr1	163259849	163260659	chr1:163259849-163260659	3	+	163259849	163259849	8553170	2	359,110,	0,700,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	163266575	163336786	chr1:163266575-163336786	0	+	163326051	163336786	789624	7	99,75,143,75,77,62,36,	0,694,59456,60912,61652,62270,70175,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	163300395	163321894	chr1:163300395-163321894	1	-	163300395	163300395	8553170	4	296,97,88,273,	0,5837,8148,21226,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	163300557	163321704	chr1:163300557-163321704	1	-	163300557	163300557	8553170	5	134,97,88,110,83,	0,5675,7986,18624,21064,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	163300662	163321752	chr1:163300662-163321752	1	-	163300662	163300662	8553170	6	29,111,97,88,110,131,	0,4540,5570,7881,18519,20959,
#Partially deleted in new
chr1	163304210	163321752	chr1:163304210-163321752	1	-	163304210	163304210	789624	4	1103,97,110,131,	0,2022,14971,17411,
#Partially deleted in new
chr1	163318837	163321741	chr1:163318837-163321741	0	-	163318837	163318837	8553170	2	454,120,	0,2784,
#Partially deleted in new
chr1	163319226	163321774	chr1:163319226-163321774	1	-	163319226	163319226	8553170	2	65,509,	0,2039,
#Partially deleted in new
chr1	163321889	163336848	chr1:163321889-163336848	0	+	163326051	163336848	789624	7	177,229,143,75,77,62,98,	0,977,4142,5598,6338,6956,14861,
#Partially deleted in new
chr1	163321899	163355727	chr1:163321899-163355727	1	+	163326051	163355469	789624	13	313,143,75,77,62,98,74,97,63,138,176,136,393,	0,4132,5588,6328,6946,14851,16120,17481,18464,21833,25863,27045,33435,
#Partially deleted in new
chr1	163321934	163355764	chr1:163321934-163355764	3	+	163326051	163355469	0	14	132,143,75,77,62,98,74,97,63,138,141,176,136,430,	0,4097,5553,6293,6911,14816,16085,17446,18429,21798,23743,25828,27010,33400,
#Partially deleted in new
chr1	163321934	163339477	chr1:163321934-163339477	0	+	163326051	163339477	789624	9	278,229,143,75,77,62,98,74,97,	0,932,4097,5553,6293,6911,14816,16085,17446,
#Partially deleted in new
chr1	163321953	163355764	chr1:163321953-163355764	1	+	163326051	163355469	0	14	259,143,75,77,62,98,74,97,63,138,141,176,136,430,	0,4078,5534,6274,6892,14797,16066,17427,18410,21779,23724,25809,26991,33381,
#Partially deleted in new
chr1	163321963	163338093	chr1:163321963-163338093	0	+	163321963	163321963	8553170	9	103,100,75,33,77,73,62,98,74,	0,4111,5524,5934,6264,6494,6882,14787,16056,
#Partially deleted in new
chr1	163321985	163328561	chr1:163321985-163328561	0	+	163321985	163321985	8553170	4	227,143,75,334,	0,4046,5502,6242,
#Partially deleted in new
chr1	163322045	163345718	chr1:163322045-163345718	0	+	163326051	163343733	789624	11	21,143,75,77,62,98,74,97,59,138,41,	0,3986,5442,6182,6800,14705,15974,17335,18322,21687,23632,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	163338014	163346240	chr1:163338014-163346240	0	+	163338014	163338014	8553170	5	79,97,63,138,563,	0,1366,2349,5718,7663,
#Partially deleted in new
chr1	163339280	163343823	chr1:163339280-163343823	0	+	163339280	163339280	8553170	3	197,63,91,	0,1083,4452,
#Partially deleted in new
chr1	163340254	163343815	chr1:163340254-163343815	0	+	163340254	163340254	8553170	2	172,83,	0,3478,
#Partially deleted in new
chr1	163422404	163423164	chr1:163422404-163423164	7	-	163422404	163422404	16724991	2	389,275,	0,485,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	163468495	163468605	chr1:163468495-163468605	7	-	163468495	163468495	16724991	1	110,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	163509483	163509595	chr1:163509483-163509595	7	+	163509483	163509483	16724991	1	112,	0,
#Deleted in new
chr1	163769338	163769691	chr1:163769338-163769691	7	-	163769338	163769338	16724991	1	353,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	163923669	163923873	chr1:163923669-163923873	3	+	163923669	163923669	8553170	1	204,	0,
#Deleted in new
chr1	164343004	164343864	chr1:164343004-164343864	7	+	164343004	164343004	16724991	1	860,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	164351272	164351388	chr1:164351272-164351388	3	+	164351272	164351272	8553170	1	116,	0,
#Deleted in new
chr1	164356766	164357364	chr1:164356766-164357364	7	+	164356766	164356766	16724991	1	598,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	164555583	164564015	chr1:164555583-164564015	0	+	164555583	164555583	8553170	3	136,74,88,	0,7654,8344,
#Deleted in new
chr1	164559199	164560357	chr1:164559199-164560357	1	+	164559822	164560167	789624	3	330,292,212,	0,522,946,
#Partially deleted in new
chr1	164559406	164792738	chr1:164559406-164792738	0	+	164559822	164792738	789624	4	123,292,74,245,	0,315,3831,233087,
#Partially deleted in new
chr1	164559634	164851831	chr1:164559634-164851831	3	+	164559822	164846676	0	9	379,74,245,191,136,160,113,90,5248,	0,3603,232859,240064,247907,252355,260437,261902,286949,
#Partially deleted in new
chr1	164559743	164849829	chr1:164559743-164849829	1	+	164559822	164849402	0	9	270,74,245,191,136,160,113,90,490,	0,3494,232750,239955,247798,252246,260328,261793,289596,
#Partially deleted in new
chr1	164559822	164846955	chr1:164559822-164846955	1	+	164559822	164821583	0	8	191,74,245,191,136,160,90,372,	0,3415,232671,239876,247719,252167,261714,286761,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	164559822	164684965	chr1:164559822-164684965	0	+	164559822	164559822	8553170	3	191,74,2836,	0,3415,122307,
#Partially deleted in new
chr1	164559822	164848522	chr1:164559822-164848522	1	+	164559822	164846676	789624	7	191,74,245,191,136,90,1939,	0,3415,232671,239876,247719,261714,286761,
#Deleted in new
chr1	164560012	164560450	chr1:164560012-164560450	0	+	164560012	164560012	8553170	1	438,	0,
#Partially deleted in new
chr1	164562804	164799883	chr1:164562804-164799883	0	+	164563262	164799883	789624	4	126,74,245,185,	0,433,229689,236894,
#Partially deleted in new
chr1	164576783	164847101	chr1:164576783-164847101	0	+	164576783	164576783	8553170	8	221,245,191,136,160,113,90,518,	0,215710,222915,230758,235206,243288,244753,269800,
#Partially deleted in new
chr1	164590349	164847101	chr1:164590349-164847101	0	+	164590349	164590349	8553170	8	85,245,191,136,160,113,90,518,	0,202144,209349,217192,221640,229722,231187,256234,
#Partially deleted in new
chr1	164605192	164847071	chr1:164605192-164847071	0	+	164605192	164605192	8553170	9	227,168,245,191,136,160,113,90,488,	0,20736,187301,194506,202349,206797,214879,216344,241391,
#Partially deleted in new
chr1	164626005	164848522	chr1:164626005-164848522	1	+	164792543	164846676	789624	9	91,260,245,191,136,160,113,90,1939,	0,31107,166488,173693,181536,185984,194066,195531,220578,
#Partially deleted in new
chr1	164626035	164682483	chr1:164626035-164682483	0	+	164626035	164626035	8553170	5	61,1165,137,327,174,	0,14993,16657,48454,56274,
#Partially deleted in new
chr1	164630980	164799889	chr1:164630980-164799889	0	+	164792543	164799889	789624	3	136,245,191,	0,161513,168718,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	164639564	164639671	chr1:164639564-164639671	3	+	164639564	164639564	8553170	1	107,	0,
#Deleted in new
chr1	164680084	164680799	chr1:164680084-164680799	3	+	164680084	164680084	8553170	1	715,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	164703025	164703309	chr1:164703025-164703309	3	-	164703025	164703025	8553170	1	284,	0,
#Deleted in new
chr1	164769115	164774641	chr1:164769115-164774641	3	-	164769115	164769115	789624	4	241,258,1251,213,	0,743,1211,5313,
#Partially deleted in new
chr1	164772911	164807571	chr1:164772911-164807571	0	+	164792543	164807571	789624	4	111,245,191,30,	0,19582,26787,34630,
#Partially deleted in new
chr1	164787642	164799796	chr1:164787642-164799796	0	+	164792543	164799796	789624	3	111,245,98,	0,4851,12056,
#Partially deleted in new
chr1	164792491	164851821	chr1:164792491-164851821	1	+	164792492	164846676	789624	7	247,191,136,160,113,90,5238,	0,7207,15050,19498,27580,29045,54092,
#Partially deleted in new
chr1	164792491	164851821	chr1:164792491-164851821	1	+	164792492	164821583	789624	6	247,191,136,160,90,5238,	0,7207,15050,19498,29045,54092,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	164812727	164850357	chr1:164812727-164850357	0	+	164812727	164812727	8553170	3	7457,90,3774,	0,8809,33856,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	164828435	164829952	chr1:164828435-164829952	3	+	164828435	164828435	8553170	1	1517,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	164854230	164854332	chr1:164854230-164854332	3	+	164854230	164854230	8553170	1	102,	0,
#Deleted in new
chr1	164921317	164921629	chr1:164921317-164921629	7	-	164921317	164921317	16724991	1	312,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	164980034	164980137	chr1:164980034-164980137	3	-	164980034	164980034	8553170	1	103,	0,
#Partially deleted in new
chr1	165201866	165356715	chr1:165201866-165356715	3	-	165203879	165355559	789624	9	2174,171,70,78,173,233,187,98,361,	0,3997,6196,8832,11774,47541,151209,153617,154488,
#Partially deleted in new
chr1	165201872	165356241	chr1:165201872-165356241	1	-	165203879	165355559	789624	9	2168,171,70,78,173,233,187,98,172,	0,3991,6190,8826,11768,47535,151203,153611,154197,
#Partially deleted in new
chr1	165203407	165213280	chr1:165203407-165213280	0	-	165203407	165203407	8553170	7	633,171,133,70,78,97,73,	0,2456,4074,4655,7291,9551,9800,
#Partially deleted in new
chr1	165203873	165355746	chr1:165203873-165355746	1	-	165203879	165355559	789624	8	167,171,70,78,173,233,187,263,	0,1990,4189,6825,9767,45534,149202,151610,
#Deleted in new
chr1	165210626	165213090	chr1:165210626-165213090	3	+	165210626	165210626	8553170	3	341,102,249,	0,609,2215,
#Partially deleted in new
chr1	165215979	165219104	chr1:165215979-165219104	3	+	165215979	165215979	8553170	2	162,512,	0,2613,
#Deleted in new
chr1	165218414	165219047	chr1:165218414-165219047	0	+	165218414	165218414	8553170	2	82,455,	0,178,
#Partially deleted in new
chr1	165400916	165445196	chr1:165400916-165445196	3	-	165401262	165444893	0	10	494,106,92,133,130,161,180,145,248,352,	0,5895,7310,8641,9785,10032,16124,18953,27802,43928,
#Partially deleted in new
chr1	165400922	165445355	chr1:165400922-165445355	1	-	165401262	165419942	789624	11	488,106,92,133,130,161,180,145,58,248,511,	0,5889,7304,8635,9779,10026,16118,18947,23828,27796,43922,
#Partially deleted in new
chr1	165410749	165424972	chr1:165410749-165424972	0	-	165410749	165410749	8553170	5	82,161,180,145,222,	0,199,6291,9120,14001,
#Partially deleted in new
chr1	165436927	165445172	chr1:165436927-165445172	0	-	165436927	165436927	789624	2	274,328,	0,7917,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	165489574	165582128	chr1:165489574-165582128	3	-	165489574	165489574	8553170	8	955,102,197,114,100,71,87,774,	0,9437,11856,33399,39208,84443,85708,91780,
#Partially deleted in new
chr1	165492960	165539612	chr1:165492960-165539612	1	-	165492960	165492960	8553170	6	243,197,92,220,43,178,	0,8470,15119,15499,15800,46474,
#Partially deleted in new
chr1	165493072	165501670	chr1:165493072-165501670	0	-	165493072	165493072	8553170	2	131,240,	0,8358,
#Deleted in new
chr1	165497723	165498348	chr1:165497723-165498348	7	+	165497723	165497723	16724991	1	625,	0,
#Partially deleted in new
chr1	165499011	165527658	chr1:165499011-165527658	0	-	165499011	165499011	8553170	3	102,197,69,	0,2419,28578,
#Partially deleted in new
chr1	165544006	165563961	chr1:165544006-165563961	3	+	165544296	165563824	789624	2	912,457,	0,19498,
#Deleted in new
chr1	165581612	165582476	chr1:165581612-165582476	7	+	165581612	165581612	16724991	1	864,	0,
#Partially deleted in new
chr1	165598462	165623331	chr1:165598462-165623331	3	+	165598462	165598462	8553170	4	222,93,90,87,	0,7133,23055,24782,
#Partially deleted in new
chr1	165630860	165655620	chr1:165630860-165655620	3	+	165649847	165655504	789624	6	433,124,74,58,73,253,	0,18980,20153,21117,23418,24507,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	165631212	165661796	chr1:165631212-165661796	1	+	165649847	165661496	789624	6	81,124,74,58,73,368,	0,18628,19801,20765,23066,30216,
#Partially deleted in new
chr1	165631225	165650774	chr1:165631225-165650774	0	+	165631225	165631225	8553170	2	68,934,	0,18615,
#Partially deleted in new
chr1	165631236	165637149	chr1:165631236-165637149	0	+	165631236	165631236	8553170	2	57,375,	0,5538,
#Partially deleted in new
chr1	165631238	165655617	chr1:165631238-165655617	0	+	165631238	165631238	8553170	6	55,210,74,58,73,250,	0,18516,19775,20739,23040,24129,
#Partially deleted in new
chr1	165631239	165655620	chr1:165631239-165655620	1	+	165632239	165655504	789624	7	54,44,124,74,58,73,253,	0,991,18601,19774,20738,23039,24128,
#Partially deleted in new
chr1	165631254	165655620	chr1:165631254-165655620	1	+	165649847	165655504	789624	7	38,96,124,74,58,73,253,	0,4472,18586,19759,20723,23024,24113,
#Partially deleted in new
chr1	165631257	165651594	chr1:165631257-165651594	0	+	165631257	165631257	8553170	3	36,124,581,	0,18583,19756,
#Partially deleted in new
chr1	165632062	165655620	chr1:165632062-165655620	1	+	165632239	165655504	789624	7	80,44,124,74,58,73,253,	0,168,17778,18951,19915,22216,23305,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	165632239	165656133	chr1:165632239-165656133	1	+	165632239	165655504	789624	6	35,124,74,58,73,766,	0,17601,18774,19738,22039,23128,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	165648791	165651892	chr1:165648791-165651892	0	+	165648791	165648791	8553170	1	3101,	0,
#Partially deleted in new
chr1	165649837	165653801	chr1:165649837-165653801	0	+	165649837	165649837	8553170	4	127,74,58,105,	0,1176,2140,3859,
#Partially deleted in new
chr1	165653832	165655620	chr1:165653832-165655620	0	+	165653832	165653832	8553170	2	519,253,	0,1535,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	165662215	165698863	chr1:165662215-165698863	3	-	165663049	165698558	789624	11	929,113,142,88,189,141,197,135,130,146,486,	0,2802,5093,6710,7046,17226,18271,19891,20765,33036,36162,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	165662584	165662687	chr1:165662584-165662687	3	-	165662584	165662584	8553170	1	103,	0,
#Deleted in new
chr1	165662774	165665206	chr1:165662774-165665206	0	-	165662774	165662774	8553170	2	370,189,	0,2243,
#Partially deleted in new
chr1	165668673	165680635	chr1:165668673-165680635	0	-	165668673	165668673	8553170	4	340,189,141,149,	0,588,10768,11813,
#Partially deleted in new
chr1	165671255	165671725	chr1:165671255-165671725	7	+	165671255	165671255	16724991	1	470,	0,
#Partially deleted in new
chr1	165676309	165676781	chr1:165676309-165676781	7	+	165676309	165676309	16724991	1	472,	0,
#Partially deleted in new
chr1	165680486	165698540	chr1:165680486-165698540	0	-	165680486	165680486	8553170	5	197,135,130,146,291,	0,1620,2494,14765,17763,
#Partially deleted in new
chr1	165682824	165698513	chr1:165682824-165698513	0	-	165682824	165682824	8553170	3	286,146,136,	0,12427,15553,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	165698749	165709968	chr1:165698749-165709968	7	+	165698749	165698749	16724991	4	96,311,205,604,	0,2931,9825,10615,
#Deleted in new
chr1	165706555	165707284	chr1:165706555-165707284	3	-	165706555	165706555	8553170	1	729,	0,
#Partially deleted in new
chr1	165708282	165709510	chr1:165708282-165709510	5	+	165708282	165708282	16724991	2	505,484,	0,744,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	165724292	165768922	chr1:165724292-165768922	1	-	165728022	165768904	789624	7	3829,145,68,47,60,78,241,	0,18874,27809,29935,35232,43899,44389,
#Partially deleted in new
chr1	165726794	165769180	chr1:165726794-165769180	1	-	165728022	165768904	789624	7	1327,145,68,47,60,78,499,	0,16372,25307,27433,32730,41397,41887,
#Partially deleted in new
chr1	165726794	165768902	chr1:165726794-165768902	3	-	165728022	165768751	789624	7	1327,145,68,47,60,78,221,	0,16372,25307,27433,32730,41397,41887,
#Partially deleted in new
chr1	165727537	165768876	chr1:165727537-165768876	1	-	165728022	165754230	789624	7	584,145,68,47,60,78,118,	0,15629,24564,26690,31987,40654,41221,
#Partially deleted in new
chr1	165728085	165768888	chr1:165728085-165768888	0	-	165754272	165768888	789624	6	36,145,68,47,78,207,	0,15081,24016,26142,40106,40596,
#Partially deleted in new
chr1	165743168	165768837	chr1:165743168-165768837	0	-	165743168	165768515	789624	6	143,68,47,60,78,356,	0,8933,11059,16356,25023,25313,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	165743178	165768918	chr1:165743178-165768918	0	-	165754892	165768904	789624	7	133,68,47,137,60,78,237,	0,8923,11049,11675,16346,25013,25503,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	165754892	165768922	chr1:165754892-165768922	1	-	165754892	165768904	789624	4	98,60,78,241,	0,4632,13299,13789,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	165768928	165775176	chr1:165768928-165775176	3	+	165768928	165768928	789624	2	447,1703,	0,4545,
#Deleted in new
chr1	165819352	165819787	chr1:165819352-165819787	7	+	165819352	165819352	16724991	1	435,	0,
#Partially deleted in new
chr1	165827530	165908109	chr1:165827530-165908109	3	+	165827833	165907823	0	7	402,160,97,143,98,49,426,	0,62673,63695,68659,75651,78390,80153,
#Partially deleted in new
chr1	165827804	165911608	chr1:165827804-165911608	1	+	165885343	165907823	789624	8	128,238,160,97,143,98,49,3925,	0,57337,62399,63421,68385,75377,78116,79879,
#Partially deleted in new
chr1	165890794	165900323	chr1:165890794-165900323	0	-	165890794	165890794	8553170	3	841,54,159,	0,1330,9370,
#Partially deleted in new
chr1	165892651	165908100	chr1:165892651-165908100	0	+	165892651	165892651	8553170	5	123,143,98,49,417,	0,3538,10530,13269,15032,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	165894165	165907790	chr1:165894165-165907790	0	+	165894165	165894165	8553170	5	414,143,98,49,107,	0,2024,9016,11755,13518,
#Partially deleted in new
chr1	165895569	165908074	chr1:165895569-165908074	1	+	165896283	165907823	0	5	72,143,98,49,391,	0,620,7612,10351,12114,
#Partially deleted in new
chr1	165895584	165907871	chr1:165895584-165907871	1	+	165896283	165907823	0	4	748,98,49,188,	0,7597,10336,12099,
#Deleted in new
chr1	165895878	165900683	chr1:165895878-165900683	3	-	165895878	165895878	8553170	2	156,519,	0,4286,
#Partially deleted in new
chr1	165897978	165908109	chr1:165897978-165908109	0	+	165897978	165897978	8553170	4	26,98,49,426,	0,5203,7942,9705,
#Partially deleted in new
chr1	165902594	165911618	chr1:165902594-165911618	0	+	165902594	165902594	8553170	3	685,49,3935,	0,3326,5089,
#Partially deleted in new
chr1	165903992	165907948	chr1:165903992-165907948	0	+	165903992	165903992	8553170	3	175,49,265,	0,1928,3691,
#Deleted in new
chr1	165907920	165907976	chr1:165907920-165907976	3	+	165907920	165907920	5263520	1	56,	0,
#Deleted in new
chr1	165941234	165941769	chr1:165941234-165941769	7	-	165941234	165941234	16724991	1	535,	0,
#Deleted in new
chr1	166022214	166023027	chr1:166022214-166023027	7	+	166022214	166022214	16724991	1	813,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	166042243	166042350	chr1:166042243-166042350	7	+	166042243	166042243	16724991	1	107,	0,
#Partially deleted in new
chr1	166057425	166166225	chr1:166057425-166166225	0	-	166070240	166166225	789624	3	3238,932,240,	0,12406,108560,
#Partially deleted in new
chr1	166059688	166166381	chr1:166059688-166166381	0	-	166070240	166166248	789624	3	975,929,396,	0,10146,106297,
#Partially deleted in new
chr1	166059900	166166234	chr1:166059900-166166234	0	-	166070240	166166234	789624	3	763,1252,249,	0,9611,106085,
#Partially deleted in new
chr1	166070018	166166715	chr1:166070018-166166715	1	-	166070240	166166248	789624	2	745,730,	0,95967,
#Partially deleted in new
chr1	166070019	166166969	chr1:166070019-166166969	3	-	166070240	166166248	789624	3	744,734,119,	0,95966,96831,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	166081182	166087483	chr1:166081182-166087483	3	+	166081182	166081182	8553170	3	70,127,397,	0,1422,5904,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	166147781	166165095	chr1:166147781-166165095	3	-	166147781	166147781	8553170	2	178,306,	0,17008,
#Deleted in new
chr1	166154742	166154798	chr1:166154742-166154798	3	-	166154742	166154742	5263520	1	56,	0,
#Partially deleted in new
chr1	166275628	166277597	chr1:166275628-166277597	7	-	166275628	166275628	16724991	1	1969,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	166334883	166335762	chr1:166334883-166335762	3	+	166334883	166334883	8553170	3	80,138,205,	0,444,674,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	166387726	166452632	chr1:166387726-166452632	3	-	166387726	166387726	8553170	3	634,105,71,	0,64577,64835,
#Partially deleted in new
chr1	166474744	166481565	chr1:166474744-166481565	7	+	166474744	166474744	16724991	4	138,148,156,326,	0,1391,3463,6495,
#Partially deleted in new
chr1	166475771	166490039	chr1:166475771-166490039	3	-	166475771	166475771	789624	3	433,89,179,	0,1109,14089,
#Partially deleted in new
chr1	166566177	166580705	chr1:166566177-166580705	7	+	166566177	166566177	16724991	8	135,182,163,143,200,351,79,347,	0,3775,4400,7457,8422,11120,12944,14181,
#Partially deleted in new
chr1	166603915	166625238	chr1:166603915-166625238	7	+	166603915	166603915	16724991	7	69,98,144,189,163,143,558,	0,844,8544,16883,17954,19728,20765,
#Partially deleted in new
chr1	166612469	166631400	chr1:166612469-166631400	5	+	166612469	166612469	16724991	8	134,189,163,143,200,353,73,280,	0,8329,9400,11174,12820,16012,16510,18651,
#Partially deleted in new
chr1	166665884	166682196	chr1:166665884-166682196	7	+	166665884	166665884	16724991	8	132,189,163,143,200,338,73,255,	0,3142,3801,5826,7508,9325,12569,16057,
#Deleted in new
chr1	166747378	166748660	chr1:166747378-166748660	7	+	166747378	166747378	16724991	1	1282,	0,
#Partially deleted in new
chr1	166796265	166797183	chr1:166796265-166797183	7	+	166796265	166796265	16724991	1	918,	0,
#Partially deleted in new
chr1	166839446	166849208	chr1:166839446-166849208	0	+	166840956	166849208	789624	5	323,134,127,99,271,	0,1508,7165,8047,9491,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	166839456	166856344	chr1:166839456-166856344	3	+	166840956	166850409	789624	6	148,134,127,99,1486,3760,	0,1498,7155,8037,9481,13128,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	166840088	166854473	chr1:166840088-166854473	1	+	166840956	166850409	789624	5	358,134,127,99,5536,	0,866,6523,7405,8849,
#Partially deleted in new
chr1	166856509	166876327	chr1:166856509-166876327	3	-	166857566	166876233	789624	8	1210,163,152,210,98,66,92,168,	0,1609,3676,5693,7314,12935,13253,19650,
#Partially deleted in new
chr1	166856509	166863216	chr1:166856509-166863216	0	-	166856509	166856509	8553170	4	1210,163,152,1014,	0,1609,3676,5693,
#Deleted in new
chr1	166868747	166869209	chr1:166868747-166869209	7	+	166868747	166868747	16724991	1	462,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	166895710	166908080	chr1:166895710-166908080	0	-	166895710	166895710	8553170	3	391,130,41,	0,11342,12329,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	166908063	166918454	chr1:166908063-166918454	0	-	166908063	166908063	8553170	2	41,663,	0,9728,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	166908190	166975324	chr1:166908190-166975324	3	-	166919354	166975268	789624	10	11200,673,217,114,177,147,57,120,333,102,	0,12516,14402,18876,27110,28400,31323,48542,49578,67032,
#Partially deleted in new
chr1	166918865	166975482	chr1:166918865-166975482	1	-	166919287	166975268	789624	9	525,217,114,177,147,57,120,333,260,	0,3727,8201,16435,17725,20648,37867,38903,56357,
#Partially deleted in new
chr1	166918865	166975482	chr1:166918865-166975482	1	-	166919354	166975268	789624	7	525,673,217,114,120,333,260,	0,1841,3727,8201,37867,38903,56357,
#Partially deleted in new
chr1	166918865	166975482	chr1:166918865-166975482	1	-	166919354	166975268	789624	8	525,673,217,114,57,120,333,260,	0,1841,3727,8201,20648,37867,38903,56357,
#Partially deleted in new
chr1	166918865	166975482	chr1:166918865-166975482	1	-	166919354	166975268	789624	9	525,673,217,114,147,57,120,333,260,	0,1841,3727,8201,17725,20648,37867,38903,56357,
#Partially deleted in new
chr1	166918865	166975482	chr1:166918865-166975482	1	-	166919354	166975268	789624	9	525,673,217,114,177,147,120,333,260,	0,1841,3727,8201,16435,17725,37867,38903,56357,
#Partially deleted in new
chr1	166918865	166975482	chr1:166918865-166975482	1	-	166919385	166975268	789624	4	525,120,333,260,	0,37867,38903,56357,
#Partially deleted in new
chr1	166975581	167022213	chr1:166975581-167022213	1	+	166989772	167021855	789624	13	85,84,93,100,156,42,125,55,142,63,133,76,546,	0,13819,14155,15796,17104,18446,28598,29494,29674,40640,42245,45503,46086,
#Partially deleted in new
chr1	166989088	167022210	chr1:166989088-167022210	1	+	166989352	167021855	0	11	396,100,156,42,125,55,142,63,133,76,543,	0,2289,3597,4939,15091,15987,16167,27133,28738,31996,32579,
#Partially deleted in new
chr1	166989108	167022214	chr1:166989108-167022214	3	+	166989352	167021855	0	12	376,93,100,156,42,125,55,142,63,133,76,547,	0,628,2269,3577,4919,15071,15967,16147,27113,28718,31976,32559,
#Partially deleted in new
chr1	166989287	167017959	chr1:166989287-167017959	0	+	166989352	167017959	789624	9	197,100,156,42,125,55,142,63,133,	0,2090,3398,4740,14892,15788,15968,26934,28539,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	166989924	167022214	chr1:166989924-167022214	0	+	166989924	166989924	8553170	12	773,100,156,42,125,55,142,143,63,133,76,547,	0,1453,2761,4103,14255,15151,15331,22444,26297,27902,31160,31743,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	167005075	167005616	chr1:167005075-167005616	0	+	167005075	167005075	8553170	2	55,361,	0,180,
#Partially deleted in new
chr1	167052550	167058542	chr1:167052550-167058542	3	+	167052550	167052550	8553170	2	216,236,	0,5756,
#Partially deleted in new
chr1	167052835	167090631	chr1:167052835-167090631	3	-	167054333	167090287	789624	7	1631,136,120,156,217,155,387,	0,2140,2894,10746,16086,20549,37409,
#Partially deleted in new
chr1	167052835	167078719	chr1:167052835-167078719	0	-	167052835	167052835	8553170	7	1631,136,120,156,217,155,134,	0,2140,2894,10746,16086,20549,25750,
#Partially deleted in new
chr1	167063629	167166479	chr1:167063629-167166479	0	-	167063629	167069012	789624	4	108,217,155,197,	0,5292,9755,102653,
#Partially deleted in new
chr1	167063689	167090326	chr1:167063689-167090326	0	-	167073403	167090287	789624	5	48,217,155,67,82,	0,5232,9695,18555,26555,
#Partially deleted in new
chr1	167094044	167129129	chr1:167094044-167129129	3	+	167094849	167128608	789624	6	150,126,95,232,218,3343,	0,789,19665,23283,25204,31742,
#Partially deleted in new
chr1	167094339	167128608	chr1:167094339-167128608	1	+	167094849	167128608	789624	6	104,126,95,232,218,2822,	0,494,19370,22988,24909,31447,
#Partially deleted in new
chr1	167094849	167129165	chr1:167094849-167129165	1	+	167094849	167128608	789624	5	110,95,232,218,3379,	0,18860,22478,24399,30937,
#Deleted in new
chr1	167125918	167129125	chr1:167125918-167129125	0	+	167125918	167125918	8553170	2	418,385,	0,2822,
#Deleted in new
chr1	167162422	167162837	chr1:167162422-167162837	7	-	167162422	167162422	16724991	1	415,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	167175916	167195789	chr1:167175916-167195789	3	-	167175916	167175916	8553170	5	496,123,152,99,101,	0,776,6125,19141,19772,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	167176073	167195480	chr1:167176073-167195480	1	-	167176073	167176073	8553170	3	742,99,89,	0,18984,19318,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	167176220	167195748	chr1:167176220-167195748	0	-	167176220	167176220	8553170	4	595,152,99,60,	0,5821,18837,19468,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	167176346	167195792	chr1:167176346-167195792	0	-	167176346	167176346	789624	4	469,152,99,136,	0,5695,18711,19310,
#Deleted in new
chr1	167219830	167220512	chr1:167219830-167220512	3	-	167219830	167219830	8553170	1	682,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	167220828	167427345	chr1:167220828-167427345	3	+	167220897	167415810	0	16	130,66,101,54,120,189,127,95,174,142,140,180,106,346,89,11846,	0,111641,144638,149332,151088,153279,155200,163028,168759,175457,177165,178357,180622,191130,192197,194671,
#Partially deleted in new
chr1	167220875	167365569	chr1:167220875-167365569	0	+	167220875	167220875	8553170	5	83,204,101,66,103,	0,20531,82598,111594,144591,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	167220889	167427345	chr1:167220889-167427345	0	+	167220897	167332481	789624	17	69,101,66,101,54,120,189,127,95,174,142,140,180,106,346,89,11846,	0,82584,111580,144577,149271,151027,153218,155139,162967,168698,175396,177104,178296,180561,191069,192136,194610,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	167220890	167427342	chr1:167220890-167427342	1	+	167220897	167415810	0	15	68,66,101,54,120,127,95,174,142,140,180,106,346,89,11843,	0,111579,144576,149270,151026,155138,162966,168697,175395,177103,178295,180560,191068,192135,194609,
#Partially deleted in new
chr1	167220890	167396318	chr1:167220890-167396318	0	+	167220897	167332481	789624	12	68,101,66,101,54,120,189,127,95,67,174,33,	0,82583,111579,144576,149270,151026,153217,155138,162966,166290,168697,175395,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	167220894	167427345	chr1:167220894-167427345	0	+	167220894	167220894	8553170	18	64,204,66,289,101,54,120,189,127,95,174,142,140,180,106,346,89,11846,	0,20512,111575,117075,144572,149266,151022,153213,155134,162962,168693,175391,177099,178291,180556,191064,192131,194605,
#Partially deleted in new
chr1	167220894	167383869	chr1:167220894-167383869	0	+	167220894	167220894	8553170	6	64,204,66,141,127,13,	0,20512,111575,153261,155134,162962,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	167220897	167427345	chr1:167220897-167427345	1	+	167332477	167415810	0	17	61,101,66,101,54,120,189,127,95,174,142,140,180,106,346,89,11846,	0,82576,111572,144569,149263,151019,153210,155131,162959,168690,175388,177096,178288,180553,191061,192128,194602,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	167329043	167427345	chr1:167329043-167427345	1	+	167329278	167415810	0	16	263,66,101,54,120,189,127,95,174,142,140,180,106,346,89,11846,	0,3426,36423,41117,42873,45064,46985,54813,60544,67242,68950,70142,72407,82915,83982,86456,
#Partially deleted in new
chr1	167329165	167413114	chr1:167329165-167413114	0	+	167329278	167413114	789624	14	141,66,101,54,120,189,127,95,142,140,180,106,346,89,	0,3304,36301,40995,42751,44942,46863,54691,67120,68828,70020,72285,82793,83860,
#Partially deleted in new
chr1	167357459	167387255	chr1:167357459-167387255	0	+	167357459	167357459	8553170	9	62,101,54,120,189,127,35,95,75,	0,8007,12701,14457,16648,18569,19093,26397,29721,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	167371979	167427342	chr1:167371979-167427342	0	+	167371979	167416089	789624	12	57,189,127,95,174,142,140,180,106,346,89,11294,	0,2128,4049,11877,17608,24306,26014,27206,29471,39979,41046,44069,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	167379107	167381000	chr1:167379107-167381000	3	+	167379107	167379107	8553170	1	1893,	0,
#Partially deleted in new
chr1	167383473	167389617	chr1:167383473-167389617	0	+	167383473	167383473	8553170	2	478,30,	0,6114,
#Partially deleted in new
chr1	167389676	167396825	chr1:167389676-167396825	0	+	167389676	167389676	8553170	3	85,142,293,	0,6609,6856,
#Partially deleted in new
chr1	167430639	167518538	chr1:167430639-167518538	3	-	167431680	167518465	0	8	1107,36,57,36,81,57,104,131,	0,2384,3380,4759,7930,8704,10024,87768,
#Partially deleted in new
chr1	167430639	167518610	chr1:167430639-167518610	1	-	167431680	167518465	0	8	1107,36,57,33,81,57,104,203,	0,2384,3380,4759,7930,8704,10024,87768,
#Partially deleted in new
chr1	167430639	167518529	chr1:167430639-167518529	0	-	167430639	167430639	8553170	7	1107,36,1415,81,57,104,122,	0,2384,3380,7930,8704,10024,87768,
#Deleted in new
chr1	167430639	167434066	chr1:167430639-167434066	0	-	167430639	167430639	8553170	4	374,170,36,47,	0,937,2384,3380,
#Partially deleted in new
chr1	167431160	167439621	chr1:167431160-167439621	0	-	167431160	167431160	8553170	6	586,36,57,36,81,278,	0,1863,2859,4238,7409,8183,
#Partially deleted in new
chr1	167431172	167439640	chr1:167431172-167439640	0	-	167431172	167431172	8553170	6	574,36,57,33,81,297,	0,1851,2847,4226,7397,8171,
#Partially deleted in new
chr1	167439872	167518610	chr1:167439872-167518610	0	-	167439872	167439872	8553170	2	895,203,	0,78535,
#Deleted in new
chr1	167457382	167458661	chr1:167457382-167458661	3	-	167457382	167457382	8553170	2	115,188,	0,1091,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	167457741	167459891	chr1:167457741-167459891	3	-	167457741	167457741	8553170	2	19,284,	0,1866,
#Deleted in new
chr1	167519535	167520586	chr1:167519535-167520586	7	+	167519535	167519535	16724991	2	90,846,	0,205,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	167529116	167553805	chr1:167529116-167553805	1	-	167533288	167553741	8553170	5	1139,135,185,120,418,	0,4146,16984,18885,24271,
#Partially deleted in new
chr1	167541012	167553767	chr1:167541012-167553767	3	-	167542297	167553741	0	4	1289,185,120,380,	0,5088,6989,12375,
#Deleted in new
chr1	167591391	167591846	chr1:167591391-167591846	7	+	167591391	167591391	16724991	1	455,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	167627384	167630674	chr1:167627384-167630674	3	-	167627384	167627384	8553170	2	2263,260,	0,3030,
#Partially deleted in new
chr1	167630092	167706249	chr1:167630092-167706249	3	+	167630423	167704696	789624	7	337,102,90,72,204,744,1586,	0,53807,55328,59956,64006,67006,74571,
#Partially deleted in new
chr1	167630092	167706248	chr1:167630092-167706248	1	+	167630423	167704696	789624	6	337,102,72,204,744,1585,	0,53807,59956,64006,67006,74571,
#Partially deleted in new
chr1	167630192	167697287	chr1:167630192-167697287	0	+	167630423	167697287	789624	5	237,102,90,204,189,	0,53707,55228,63906,66906,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	167630248	167642006	chr1:167630248-167642006	0	+	167630248	167630248	789624	3	181,142,616,	0,10322,11142,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	167630260	167665040	chr1:167630260-167665040	0	+	167630260	167630260	8553170	2	169,1550,	0,33230,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	167630265	167641741	chr1:167630265-167641741	0	+	167630265	167630265	8553170	6	164,158,53,64,142,351,	0,3383,8124,10145,10305,11125,
#Deleted in new
chr1	167721191	167722014	chr1:167721191-167722014	0	+	167721191	167721191	8553170	3	137,132,151,	0,427,672,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	167721949	167791919	chr1:167721949-167791919	3	+	167722151	167787921	789624	6	293,167,214,133,103,4100,	0,43633,50325,51286,54114,65870,
#Partially deleted in new
chr1	167721949	167765896	chr1:167721949-167765896	0	+	167721949	167721949	8553170	2	293,314,	0,43633,
#Partially deleted in new
chr1	167721983	167788753	chr1:167721983-167788753	0	+	167722151	167773265	789624	5	259,167,133,103,934,	0,43599,51252,54080,65836,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	167721988	167790819	chr1:167721988-167790819	1	+	167722151	167787921	789624	3	254,167,3000,	0,43594,65831,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	167721992	167773909	chr1:167721992-167773909	0	+	167721992	167721992	8553170	4	250,167,214,674,	0,43590,50282,51243,
#Partially deleted in new
chr1	167722151	167787844	chr1:167722151-167787844	1	+	167722151	167787844	789624	5	91,167,214,133,25,	0,43431,50123,51084,65668,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	167765057	167788012	chr1:167765057-167788012	0	+	167765057	167765057	8553170	5	692,214,133,103,193,	0,7217,8178,11006,22762,
#Partially deleted in new
chr1	167765569	167788173	chr1:167765569-167788173	0	+	167765569	167787844	789624	4	180,214,133,354,	0,6705,7666,22250,
#Partially deleted in new
chr1	167774555	167788385	chr1:167774555-167788385	0	+	167774555	167774555	8553170	3	292,103,566,	0,1508,13264,
#Deleted in new
chr1	167787066	167788154	chr1:167787066-167788154	0	+	167787066	167787066	8553170	2	199,335,	0,753,
#Partially deleted in new
chr1	167809387	167914215	chr1:167809387-167914215	1	-	167809677	167899605	0	30	452,189,196,118,116,97,205,157,176,108,232,70,291,279,129,137,275,87,193,154,56,190,77,119,192,89,97,206,39,240,	0,1337,8684,12636,13620,15088,15263,19879,23599,24582,26921,27861,36175,36597,38973,44965,46777,50419,51483,60869,65743,69058,70727,71103,74049,84465,87207,90035,92628,104588,
#Partially deleted in new
chr1	167809644	167914102	chr1:167809644-167914102	3	-	167809677	167905140	0	33	195,189,196,118,116,97,205,157,176,108,232,70,291,279,129,137,275,87,193,154,56,190,77,119,192,89,97,206,144,39,105,206,127,	0,1080,8427,12379,13363,14831,15006,19622,23342,24325,26664,27604,35918,36340,38716,44708,46520,50162,51226,60612,65486,68801,70470,70846,73792,84208,86950,89778,92017,92371,94242,95348,104331,
#Partially deleted in new
chr1	167809645	167848489	chr1:167809645-167848489	0	-	167834641	167848489	789624	15	194,189,196,50,118,116,97,205,157,176,108,248,291,279,129,	0,1079,8426,8717,12378,13362,14830,15005,19621,23341,24324,24801,35917,36339,38715,
#Partially deleted in new
chr1	167809677	167914102	chr1:167809677-167914102	1	-	167809677	167901821	0	33	162,189,196,118,116,97,205,157,176,108,232,70,291,279,129,137,275,87,193,154,56,190,77,119,192,89,97,206,181,39,105,206,127,	0,1047,8394,12346,13330,14798,14973,19589,23309,24292,26631,27571,35885,36307,38683,44675,46487,50129,51193,60579,65453,68768,70437,70813,73759,84175,86917,89745,91984,92338,94209,95315,104298,
#Deleted in new
chr1	167819897	167820248	chr1:167819897-167820248	7	-	167819897	167819897	16724991	2	170,96,	0,255,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	167820405	167821224	chr1:167820405-167821224	3	+	167820405	167820405	8553170	2	156,562,	0,257,
#Partially deleted in new
chr1	167904609	167914089	chr1:167904609-167914089	1	-	167904918	167905140	789624	2	589,114,	0,9366,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	167916728	167936040	chr1:167916728-167936040	3	-	167918322	167935841	789624	5	1631,112,85,41,308,	0,3250,3818,7768,19004,
#Partially deleted in new
chr1	167918067	167937040	chr1:167918067-167937040	1	-	167918322	167935841	789624	6	292,112,85,41,166,102,	0,1911,2479,6429,17665,18871,
#Partially deleted in new
chr1	167920010	167936805	chr1:167920010-167936805	0	-	167920010	167935841	789624	5	80,85,41,166,273,	0,536,4486,15722,16522,
#Partially deleted in new
chr1	167935782	167987547	chr1:167935782-167987547	0	+	167935782	167935782	8553170	5	330,62,93,186,53,	0,16017,30846,39047,51712,
#Partially deleted in new
chr1	167936273	167991339	chr1:167936273-167991339	0	+	167936273	167936273	8553170	6	236,62,93,186,114,136,	0,15526,30355,38556,51221,54930,
#Partially deleted in new
chr1	167936558	168075841	chr1:167936558-168075841	1	+	167936911	168075435	0	21	450,62,186,114,136,215,94,120,261,171,60,118,116,87,328,42,139,157,89,106,471,	0,15241,38271,50936,54645,56667,65923,67311,67974,79222,86429,101812,106466,108026,108341,114333,127062,129031,129818,131799,138812,
#Partially deleted in new
chr1	167936660	168075843	chr1:167936660-168075843	3	+	167936911	168075435	0	20	348,62,93,186,114,136,215,94,120,261,60,118,116,87,328,139,157,89,106,473,	0,15139,29968,38169,50834,54543,56565,65821,67209,67872,86327,101710,106364,107924,108239,126960,128929,129716,131697,138710,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	167936672	168024050	chr1:167936672-168024050	0	+	167936911	168019585	789624	12	336,62,93,186,114,136,215,94,120,261,123,1063,	0,15127,29956,38157,50822,54531,56553,65809,67197,67860,82872,86315,
#Partially deleted in new
chr1	167936707	168075834	chr1:167936707-168075834	1	+	167936911	168075435	0	19	301,62,93,186,114,136,215,94,120,261,118,116,87,328,139,157,89,106,464,	0,15092,29921,38122,50787,54496,56518,65774,67162,67825,101663,106317,107877,108192,126913,128882,129669,131650,138663,
#Partially deleted in new
chr1	167936817	168075834	chr1:167936817-168075834	1	+	167936911	168075435	0	22	191,62,93,186,114,136,215,94,120,261,171,60,118,116,87,328,42,139,157,89,106,464,	0,14982,29811,38012,50677,54386,56408,65664,67052,67715,78963,86170,101553,106207,107767,108082,114074,126803,128772,129559,131540,138553,
#Partially deleted in new
chr1	167937152	167993330	chr1:167937152-167993330	0	+	167937152	167937152	8553170	7	100,62,93,186,114,136,105,	0,14647,29476,37677,50342,54051,56073,
#Partially deleted in new
chr1	167968489	167991339	chr1:167968489-167991339	0	+	167968489	167968489	8553170	5	44,56,186,114,136,	0,714,6340,19005,22714,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	167998659	167998726	chr1:167998659-167998726	3	+	167998659	167998659	789624	1	67,	0,
#Partially deleted in new
chr1	168015886	168019961	chr1:168015886-168019961	0	+	168015886	168015886	8553170	2	65,417,	0,3658,
#Partially deleted in new
chr1	168042729	168075786	chr1:168042729-168075786	0	+	168042729	168042729	8553170	8	411,87,328,139,157,83,106,416,	0,1855,2170,20891,22860,23653,25628,32641,
#Partially deleted in new
chr1	168045080	168063967	chr1:168045080-168063967	0	+	168045080	168045080	8553170	2	147,347,	0,18540,
#Deleted in new
chr1	168055900	168056422	chr1:168055900-168056422	7	-	168055900	168055900	16724991	1	522,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	168079542	168137573	chr1:168079542-168137573	1	-	168085530	168137396	789624	6	6254,120,105,725,418,184,	0,8042,11021,16965,24934,57847,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	168079542	168137667	chr1:168079542-168137667	1	-	168085530	168134921	789624	7	6254,120,105,725,418,131,503,	0,8042,11021,16965,24934,55363,57622,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	168079542	168136707	chr1:168079542-168136707	1	-	168085530	168136396	789624	5	6254,120,105,725,451,	0,8042,11021,16965,56714,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	168079542	168137573	chr1:168079542-168137573	1	-	168085530	168137421	789624	5	6254,120,105,725,184,	0,8042,11021,16965,57847,
#Partially deleted in new
chr1	168085265	168089565	chr1:168085265-168089565	0	-	168085265	168085265	8553170	2	531,1981,	0,2319,
#Partially deleted in new
chr1	168085268	168136383	chr1:168085268-168136383	1	-	168085530	168097210	789624	6	528,120,105,725,131,374,	0,2316,5295,11239,49637,50741,
#Partially deleted in new
chr1	168090445	168104909	chr1:168090445-168104909	0	-	168090445	168090445	8553170	3	223,725,433,	0,6062,14031,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	168118600	168135037	chr1:168118600-168135037	0	-	168118600	168118600	8553170	3	135,46,132,	0,15275,16305,
#Partially deleted in new
chr1	168178932	168202114	chr1:168178932-168202114	3	+	168179077	168200046	0	7	249,180,100,132,96,63,2212,	0,4969,5846,12436,17614,19986,20970,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	168179054	168192395	chr1:168179054-168192395	1	+	168179077	168192228	0	5	127,180,100,132,188,	0,4847,5724,12314,13153,
#Deleted in new
chr1	168210615	168210969	chr1:168210615-168210969	7	+	168210615	168210615	16724991	1	354,	0,
#Deleted in new
chr1	168215404	168215652	chr1:168215404-168215652	7	+	168215404	168215404	16724991	1	248,	0,
#Partially deleted in new
chr1	168225937	168236770	chr1:168225937-168236770	0	+	168225937	168225937	8553170	7	205,111,87,86,82,36,59,	0,3664,5576,5896,9163,10651,10774,
#Partially deleted in new
chr1	168225949	168239160	chr1:168225949-168239160	1	+	168226079	168236766	789624	6	193,87,86,36,59,30,	0,5564,5884,10639,10762,13181,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	168226007	168253025	chr1:168226007-168253025	3	+	168226079	168242540	789624	8	135,87,86,82,36,59,30,10525,	0,5506,5826,9093,10581,10704,13123,16493,
#Partially deleted in new
chr1	168226007	168243140	chr1:168226007-168243140	1	+	168226079	168236766	789624	7	135,87,86,36,59,30,640,	0,5506,5826,10581,10704,13123,16493,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	168245564	168247343	chr1:168245564-168247343	7	-	168245564	168245564	16724991	1	1779,	0,
#Deleted in new
chr1	168245787	168247204	chr1:168245787-168247204	5	-	168245787	168245787	16724991	1	1417,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	168263374	168263481	chr1:168263374-168263481	3	-	168263374	168263374	8553170	1	107,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	168281039	168314426	chr1:168281039-168314426	3	+	168281090	168313002	789624	8	254,265,135,62,62,189,136,1719,	0,10120,12104,16684,19382,23968,27702,31668,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	168291159	168314424	chr1:168291159-168314424	0	+	168291159	168313002	789624	6	265,135,62,62,136,1717,	0,1984,6564,9262,17582,21548,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	168297623	168313915	chr1:168297623-168313915	0	+	168297623	168313002	789624	5	162,62,189,136,1208,	0,2798,7384,11118,15084,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	168308016	168314424	chr1:168308016-168314424	0	+	168308016	168308016	8553170	2	861,1717,	0,4691,
#Partially deleted in new
chr1	168317496	168376876	chr1:168317496-168376876	7	+	168317496	168317496	16724991	4	150,1207,155,166,	0,51327,58476,59214,
#Deleted in new
chr1	168369053	168369601	chr1:168369053-168369601	5	+	168369053	168369053	16724991	1	548,	0,
#Deleted in new
chr1	168375523	168375621	chr1:168375523-168375621	3	+	168375523	168375523	5263520	1	98,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	168400828	168422656	chr1:168400828-168422656	0	-	168400828	168400828	789624	4	1515,144,75,67,	0,11964,21301,21761,
#Partially deleted in new
chr1	168401482	168407274	chr1:168401482-168407274	3	-	168401482	168401482	8553170	3	48,305,36,	0,556,5756,
#Deleted in new
chr1	168449671	168451211	chr1:168449671-168451211	7	-	168449671	168449671	16724991	1	1540,	0,
#Deleted in new
chr1	168540764	168543997	chr1:168540764-168543997	3	-	168540951	168543964	789624	3	356,115,94,	0,1228,3139,
#Deleted in new
chr1	168542736	168543354	chr1:168542736-168543354	7	+	168542736	168542736	16724991	1	618,	0,
#Deleted in new
chr1	168576472	168582077	chr1:168576472-168582077	3	+	168576637	168581220	0	3	226,115,1026,	0,3590,4579,
#Deleted in new
chr1	168578652	168579439	chr1:168578652-168579439	7	-	168578652	168578652	16724991	1	787,	0,
#Partially deleted in new
chr1	168695458	168729264	chr1:168695458-168729264	3	-	168696548	168729174	789624	4	1157,108,126,395,	0,5558,18762,33411,
#Partially deleted in new
chr1	168763364	168774490	chr1:168763364-168774490	3	-	168763364	168763364	8553170	2	252,166,	0,10960,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	168786938	168792886	chr1:168786938-168792886	3	+	168786938	168786938	789624	3	290,109,556,	0,1842,5392,
#Deleted in new
chr1	168898135	168898439	chr1:168898135-168898439	7	+	168898135	168898135	16724991	1	304,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	168903904	169087005	chr1:168903904-169087005	3	-	168903904	168903904	789624	5	808,112,50,108,51,	0,3954,152279,156507,183050,
#Deleted in new
chr1	168938466	168938923	chr1:168938466-168938923	7	+	168938466	168938466	16724991	1	457,	0,
#Deleted in new
chr1	169067263	169067364	chr1:169067263-169067364	7	+	169067263	169067263	16724991	1	101,	0,
#Deleted in new
chr1	169104123	169104907	chr1:169104123-169104907	3	+	169104123	169104123	789624	2	370,198,	0,586,
#Partially deleted in new
chr1	169105696	169132722	chr1:169105696-169132722	3	+	169106829	169131555	789624	7	119,507,129,156,185,81,1431,	0,723,5673,19187,21527,24313,25595,
#Partially deleted in new
chr1	169106322	169132019	chr1:169106322-169132019	1	+	169106829	169131555	789624	6	604,129,156,185,81,728,	0,5047,18561,20901,23687,24969,
#Partially deleted in new
chr1	169107906	169127399	chr1:169107906-169127399	0	+	169111440	169127399	789624	4	257,129,156,176,	0,3463,16977,19317,
#Partially deleted in new
chr1	169132530	169367967	chr1:169132530-169367967	3	-	169132784	169367710	789624	12	287,108,102,69,65,106,208,51,111,167,108,260,	0,36916,98187,102600,105092,154772,166025,170614,177439,190586,191862,235177,
#Partially deleted in new
chr1	169132530	169367946	chr1:169132530-169367946	1	-	169132784	169324395	789624	12	287,108,102,69,65,106,208,51,111,167,77,239,	0,36916,98187,102600,105092,154772,166025,170614,177439,190586,191862,235177,
#Partially deleted in new
chr1	169132530	169230732	chr1:169132530-169230732	0	-	169132530	169132530	8553170	3	287,122,15,	0,36902,98187,
#Partially deleted in new
chr1	169132530	169190710	chr1:169132530-169190710	0	-	169132530	169132530	8553170	2	287,68,	0,58112,
#Partially deleted in new
chr1	169132536	169367946	chr1:169132536-169367946	0	-	169190675	169367710	789624	13	281,108,63,102,69,65,106,208,51,111,167,108,239,	0,36910,58106,98181,102594,105086,154766,166019,170608,177433,190580,191856,235171,
#Partially deleted in new
chr1	169169520	169310071	chr1:169169520-169310071	0	-	169169520	169169520	8553170	7	34,102,69,65,208,51,102,	0,61197,65610,68102,129035,133624,140449,
#Partially deleted in new
chr1	169230713	169367730	chr1:169230713-169367730	0	-	169247043	169367710	789624	11	106,69,65,73,106,208,51,111,167,108,23,	0,4417,6909,16274,56589,67842,72431,79256,92403,93679,136994,
#Partially deleted in new
chr1	169230751	169367797	chr1:169230751-169367797	0	-	169230751	169230751	8553170	8	68,69,65,106,208,51,111,90,	0,4379,6871,56551,67804,72393,79218,136956,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	169283820	169367772	chr1:169283820-169367772	0	-	169283820	169283820	8553170	7	3588,208,51,111,167,108,65,	0,14735,19324,26149,39296,40572,83887,
#Partially deleted in new
chr1	169287204	169324450	chr1:169287204-169324450	0	-	169287204	169287204	8553170	7	204,208,68,51,111,167,58,	0,11351,15102,15940,22765,35912,37188,
#Partially deleted in new
chr1	169298555	169367948	chr1:169298555-169367948	0	-	169298555	169298555	8553170	5	208,51,111,108,241,	0,4589,11414,25837,69152,
#Partially deleted in new
chr1	169298577	169303452	chr1:169298577-169303452	0	-	169298577	169298577	8553170	2	186,308,	0,4567,
#Partially deleted in new
chr1	169298604	169367797	chr1:169298604-169367797	0	-	169298604	169298604	8553170	7	159,84,51,111,167,108,90,	0,3365,4540,11365,24512,25788,69103,
#Partially deleted in new
chr1	169303099	169367782	chr1:169303099-169367782	0	-	169303099	169303099	8553170	5	96,111,167,108,75,	0,6870,20017,21293,64608,
#Partially deleted in new
chr1	169310664	169322479	chr1:169310664-169322479	3	+	169310664	169310664	8553170	2	107,261,	0,11554,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	169367969	169396540	chr1:169367969-169396540	3	+	169369522	169387182	789624	8	373,78,440,200,129,220,213,647,	0,1503,8570,10360,12511,14092,19027,27924,
#Partially deleted in new
chr1	169367969	169377383	chr1:169367969-169377383	1	+	169369522	169377036	789624	3	373,78,844,	0,1503,8570,
#Partially deleted in new
chr1	169367969	169388305	chr1:169367969-169388305	1	+	169369522	169387182	789624	7	373,78,440,200,129,220,1309,	0,1503,8570,10360,12511,14092,19027,
#Partially deleted in new
chr1	169367971	169376894	chr1:169367971-169376894	0	+	169369522	169376894	789624	3	371,69,355,	0,1510,8568,
#Partially deleted in new
chr1	169368236	169380562	chr1:169368236-169380562	0	+	169369522	169380562	789624	5	126,78,440,200,82,	0,1236,8303,10093,12244,
#Partially deleted in new
chr1	169394869	169427474	chr1:169394869-169427474	1	-	169395046	169424927	789624	6	337,152,147,951,140,187,	0,2367,24143,26493,29941,32418,
#Partially deleted in new
chr1	169394869	169427417	chr1:169394869-169427417	1	-	169395046	169424927	789624	6	337,155,147,951,140,130,	0,2367,24143,26493,29941,32418,
#Partially deleted in new
chr1	169395046	169460669	chr1:169395046-169460669	3	-	169395046	169424927	789624	7	160,152,147,951,140,68,417,	0,2190,23966,26316,29764,64750,65206,
#Partially deleted in new
chr1	169418785	169427474	chr1:169418785-169427474	1	-	169418970	169424927	789624	4	374,951,140,187,	0,2577,6025,8502,
#Deleted in new
chr1	169421362	169427462	chr1:169421362-169427462	0	-	169421362	169424927	789624	3	951,120,175,	0,3448,5925,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	169442637	169460452	chr1:169442637-169460452	0	-	169442637	169442637	8553170	6	771,179,192,81,68,200,	0,8495,9920,11862,17159,17615,
#Partially deleted in new
chr1	169454390	169460421	chr1:169454390-169460421	0	-	169454390	169454390	8553170	3	190,68,169,	0,5406,5862,
#Partially deleted in new
chr1	169463908	169486003	chr1:169463908-169486003	3	-	169465848	169485766	789624	6	2069,142,193,223,603,441,	0,4202,4735,6055,13246,21654,
#Partially deleted in new
chr1	169463928	169485931	chr1:169463928-169485931	1	-	169465848	169485766	789624	5	2049,142,193,223,369,	0,4182,4715,6035,21634,
#Partially deleted in new
chr1	169463930	169485944	chr1:169463930-169485944	1	-	169465848	169485766	789624	6	2047,142,193,223,603,382,	0,4180,4713,6033,13224,21632,
#Partially deleted in new
chr1	169463931	169469197	chr1:169463931-169469197	0	-	169463931	169463931	8553170	2	2046,1087,	0,4179,
#Partially deleted in new
chr1	169464047	169485941	chr1:169464047-169485941	1	-	169465848	169485766	789624	6	1930,142,94,223,603,379,	0,4063,4596,5916,13107,21515,
#Deleted in new
chr1	169474059	169474159	chr1:169474059-169474159	7	-	169474059	169474059	16724991	1	100,	0,
#Deleted in new
chr1	169486075	169486986	chr1:169486075-169486986	3	+	169486075	169486075	8553170	1	911,	0,
#Partially deleted in new
chr1	169514165	169586588	chr1:169514165-169586588	1	-	169514312	169586386	789624	25	294,183,152,145,156,104,72,117,180,211,237,175,2821,228,151,215,100,178,166,222,144,213,123,92,360,	0,1278,4246,6354,9031,9635,10671,11735,13749,15442,16620,22340,26128,30130,32276,35635,36474,38391,41016,42480,44987,46388,58055,68265,72063,
#Partially deleted in new
chr1	169514165	169586588	chr1:169514165-169586588	3	-	169514312	169586386	0	25	294,183,152,145,156,104,72,117,180,211,237,175,2821,213,151,215,100,178,166,222,144,213,123,92,360,	0,1278,4246,6354,9031,9635,10671,11735,13749,15442,16620,22340,26128,30130,32276,35635,36474,38391,41016,42480,44987,46388,58055,68265,72063,
#Partially deleted in new
chr1	169514165	169515745	chr1:169514165-169515745	0	-	169514165	169514165	8553170	2	294,302,	0,1278,
#Partially deleted in new
chr1	169588848	169619219	chr1:169588848-169619219	0	-	169590147	169619219	789624	15	717,56,31,186,210,186,186,186,186,186,186,186,108,387,91,	0,1298,2577,5843,7076,8142,14177,18100,20655,22643,23368,24080,24737,28179,30280,
#Partially deleted in new
chr1	169588851	169630112	chr1:169588851-169630112	3	-	169590147	169630074	789624	17	610,56,31,120,186,210,186,186,186,186,186,186,186,108,387,91,41,	0,1295,2574,4753,5840,7073,8139,14174,18097,20652,22640,23365,24077,24734,28176,30277,41220,
#Partially deleted in new
chr1	169589076	169591570	chr1:169589076-169591570	0	-	169589076	169589076	8553170	3	489,56,145,	0,1070,2349,
#Partially deleted in new
chr1	169589513	169630076	chr1:169589513-169630076	1	-	169590147	169630074	789624	16	92,56,31,120,186,210,186,186,186,186,186,186,108,387,91,5,	0,633,1912,4091,5178,6411,7477,13512,17435,19990,22703,23415,24072,27514,29615,40558,
#Partially deleted in new
chr1	169590146	169630193	chr1:169590146-169630193	1	-	169590147	169630074	789624	15	56,31,120,186,210,186,186,186,186,186,186,108,387,91,122,	0,1279,3458,4545,5778,6844,12879,16802,19357,21345,22782,23439,26881,28982,39925,
#Partially deleted in new
chr1	169590146	169630077	chr1:169590146-169630077	1	-	169590147	169630074	789624	13	56,31,120,186,210,192,186,186,186,108,387,91,6,	0,1279,3458,4545,5778,16796,19357,22070,22782,23439,26881,28982,39925,
#Partially deleted in new
chr1	169603025	169630086	chr1:169603025-169630086	0	-	169603025	169630074	789624	8	186,186,186,186,108,387,91,15,	0,3923,9191,9903,10560,14002,16103,27046,
#Duplicated in new
chr1	169662006	169853085	chr1:169662006-169853085	0	+	169662006	169662006	8553170	29	517,157,177,118,37,102,89,105,141,129,85,139,81,65,149,130,187,83,52,90,186,123,96,114,105,63,113,120,296,	0,21462,21749,121804,122870,136850,138876,140614,141162,142105,143997,145784,159672,161401,165044,165704,167256,168252,168689,170410,174920,180410,181667,185683,187493,188258,188447,189810,190783,
#Partially deleted in new
chr1	169690666	169711698	chr1:169690666-169711698	3	-	169691783	169711537	789624	9	1136,19,129,186,186,108,387,82,203,	0,5868,10893,12588,13901,16675,17750,19769,20829,
#Partially deleted in new
chr1	169691680	169703329	chr1:169691680-169703329	0	-	169691680	169691680	8553170	3	122,19,75,	0,4854,11574,
#Partially deleted in new
chr1	169701494	169711698	chr1:169701494-169711698	0	-	169701494	169701494	8553170	7	194,186,186,108,387,82,203,	0,1760,3073,5847,6922,8941,10001,
#Deleted in new
chr1	169703104	169704753	chr1:169703104-169704753	0	-	169703104	169703104	8553170	2	336,186,	0,1463,
#Deleted in new
chr1	169703316	169708640	chr1:169703316-169708640	0	-	169703316	169703316	8553170	5	124,59,186,108,224,	0,719,1251,4025,5100,
#Deleted in new
chr1	169704726	169710532	chr1:169704726-169710532	0	-	169704726	169704726	8553170	4	27,108,387,97,	0,2615,3690,5709,
#Partially deleted in new
chr1	169722640	169734062	chr1:169722640-169734062	3	-	169725743	169733612	0	14	1869,73,22,108,177,189,189,189,186,186,108,384,85,92,	0,3088,3266,4058,4708,5098,5417,6545,6847,7791,9194,9974,10935,11330,
#Partially deleted in new
chr1	169722640	169733659	chr1:169722640-169733659	1	-	169725743	169733612	789624	11	1869,73,22,108,177,189,189,186,108,384,84,	0,3088,3266,4058,4708,5098,6545,6847,9194,9974,10935,
#Partially deleted in new
chr1	169722640	169733660	chr1:169722640-169733660	1	-	169725743	169733612	789624	12	1869,73,22,108,177,189,189,186,186,108,384,85,	0,3088,3266,4058,4708,5098,6545,6847,7791,9194,9974,10935,
#Partially deleted in new
chr1	169722640	169733660	chr1:169722640-169733660	1	-	169725743	169733612	789624	12	1869,73,22,108,177,189,189,186,186,108,384,85,	0,3088,3266,4058,4708,5417,6545,6847,7791,9194,9974,10935,
#Partially deleted in new
chr1	169725728	169733660	chr1:169725728-169733660	1	-	169725743	169733612	789624	10	73,22,108,177,189,186,186,108,384,85,	0,178,970,1620,3457,3759,4703,6106,6886,7847,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	169731490	169732718	chr1:169731490-169732718	0	-	169731490	169731490	8553170	2	452,104,	0,1124,
#Partially deleted in new
chr1	169733576	169764705	chr1:169733576-169764705	0	-	169733576	169733612	789624	3	84,153,323,	0,394,30806,
#Deleted in new
chr1	169762928	169764648	chr1:169762928-169764648	3	-	169762928	169762928	8553170	2	411,266,	0,1454,
#Partially deleted in new
chr1	169792528	169794689	chr1:169792528-169794689	1	-	169792576	169793695	0	2	1369,57,	0,2104,
#Partially deleted in new
chr1	169792528	169794966	chr1:169792528-169794966	3	-	169792576	169793695	0	2	1369,152,	0,2286,
#Partially deleted in new
chr1	169793141	169794963	chr1:169793141-169794963	0	-	169793141	169793695	789624	2	756,94,	0,1728,
#Partially deleted in new
chr1	169794729	169804386	chr1:169794729-169804386	1	+	169800905	169804248	789624	6	176,102,89,105,141,312,	0,4127,6153,7891,8439,9345,
#Partially deleted in new
chr1	169795042	169807837	chr1:169795042-169807837	0	+	169795102	169802640	789624	7	171,40,105,141,166,85,47,	0,3876,7578,8126,9032,10961,12748,
#Partially deleted in new
chr1	169795042	169804347	chr1:169795042-169804347	1	+	169795102	169804168	789624	6	171,40,89,105,141,236,	0,3876,5840,7578,8126,9069,
#Partially deleted in new
chr1	169795048	169854080	chr1:169795048-169854080	3	+	169800905	169852987	789624	25	67,155,102,89,105,141,166,85,139,81,65,149,130,187,83,52,90,186,123,96,114,105,81,120,1291,	0,780,3808,5834,7572,8120,9026,10955,12742,26630,28359,32002,32662,34214,35210,35647,37368,41878,47368,48625,52641,54451,55216,56768,57741,
#Partially deleted in new
chr1	169795078	169854080	chr1:169795078-169854080	0	+	169795102	169802640	789624	23	135,40,105,141,129,85,139,81,65,149,130,187,83,52,90,186,123,96,114,105,81,120,1291,	0,3840,7542,8090,9033,10925,12712,26600,28329,31972,32632,34184,35180,35617,37338,41848,47338,48595,52611,54421,55186,56738,57711,
#Partially deleted in new
chr1	169795078	169821719	chr1:169795078-169821719	0	+	169795102	169802640	789624	8	135,40,105,141,129,85,139,41,	0,3840,7542,8090,9033,10925,12712,26600,
#Partially deleted in new
chr1	169795408	169854080	chr1:169795408-169854080	1	+	169800905	169852987	789624	24	575,102,89,105,141,166,85,139,81,65,149,130,187,83,52,90,186,123,96,114,105,81,120,1291,	0,3448,5474,7212,7760,8666,10595,12382,26270,27999,31642,32302,33854,34850,35287,37008,41518,47008,48265,52281,54091,54856,56408,57381,
#Partially deleted in new
chr1	169795920	169853037	chr1:169795920-169853037	1	+	169827171	169852987	789624	23	63,102,89,105,141,166,85,81,65,149,130,187,83,52,90,186,123,96,114,105,81,120,248,	0,2936,4962,6700,7248,8154,10083,25758,27487,31130,31790,33342,34338,34775,36496,41006,46496,47753,51769,53579,54344,55896,56869,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	169849630	169893952	chr1:169849630-169893952	1	-	169853712	169888840	789624	13	4142,695,172,185,140,78,112,103,57,114,186,215,165,	0,4639,9410,12982,14738,17265,19297,20624,24065,26347,29003,39045,44157,
#Partially deleted in new
chr1	169853073	169888888	chr1:169853073-169888888	1	-	169853712	169888840	789624	13	699,695,162,172,185,140,78,112,103,57,114,186,213,	0,1196,2722,5967,9539,11295,13822,15854,17181,20622,22904,25560,35602,
#Partially deleted in new
chr1	169853073	169893959	chr1:169853073-169893959	3	-	169853712	169888840	789624	14	699,695,162,172,185,140,78,112,103,57,114,186,215,172,	0,1196,2722,5967,9539,11295,13822,15854,17181,20622,22904,25560,35602,40714,
#Partially deleted in new
chr1	169854510	169894267	chr1:169854510-169894267	0	-	169854510	169888840	789624	12	454,172,185,140,78,112,103,57,114,186,215,261,	0,4530,8102,9858,12385,14417,15744,19185,21467,24123,34165,39496,
#Partially deleted in new
chr1	169859118	169893952	chr1:169859118-169893952	0	-	169859118	169859118	8553170	11	94,185,140,78,201,103,57,114,186,215,165,	0,3494,5250,7777,9809,11136,14577,16859,19515,29557,34669,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	169859755	169860052	chr1:169859755-169860052	3	+	169859755	169859755	8553170	1	297,	0,
#Partially deleted in new
chr1	169921325	170074695	chr1:169921325-170074695	3	-	169921675	170074467	789624	20	456,100,190,86,99,126,166,113,109,101,163,179,99,125,100,142,56,155,132,260,	0,32685,39720,51187,56759,60646,61376,61944,63256,70829,95136,103092,110560,113046,114128,116964,117907,125386,133979,153110,
#Partially deleted in new
chr1	169921325	170068917	chr1:169921325-170068917	1	-	169921675	170055348	789624	20	456,100,190,86,99,126,166,113,109,101,163,179,99,125,100,142,56,155,132,1414,	0,32685,39720,51187,56759,60646,61376,61944,63256,70829,95136,103092,110560,113046,114128,116964,117907,125386,133979,146178,
#Partially deleted in new
chr1	169921325	170074588	chr1:169921325-170074588	1	-	169921675	170074467	789624	19	456,100,190,86,99,126,166,113,109,101,163,179,99,125,100,142,56,155,153,	0,32685,39720,51187,56759,60646,61376,61944,63256,70829,95136,103092,110560,113046,114128,116964,117907,125386,153110,
#Partially deleted in new
chr1	169921330	170074738	chr1:169921330-170074738	1	-	169921675	170041761	789624	21	451,100,190,86,99,126,166,113,109,101,163,179,99,125,100,142,56,164,155,132,303,	0,32680,39715,51182,56754,60641,61371,61939,63251,70824,95131,103087,110555,113041,114123,116959,117902,120346,125381,133974,153105,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	169957941	169958246	chr1:169957941-169958246	3	-	169957941	169957941	8553170	1	305,	0,
#Deleted in new
chr1	169990066	169990196	chr1:169990066-169990196	7	+	169990066	169990066	16724991	1	130,	0,
#Deleted in new
chr1	170024076	170024683	chr1:170024076-170024683	3	+	170024076	170024076	8553170	2	207,134,	0,473,
#Partially deleted in new
chr1	170024467	170032210	chr1:170024467-170032210	0	-	170024467	170024467	8553170	2	129,325,	0,7418,
#Partially deleted in new
chr1	170035508	170085208	chr1:170035508-170085208	0	-	170035508	170035508	8553170	6	45,142,56,155,132,174,	0,2781,3724,11203,19796,49526,
#Deleted in new
chr1	170115635	170116576	chr1:170115635-170116576	7	+	170115635	170115635	16724991	1	941,	0,
#Partially deleted in new
chr1	170146000	170167790	chr1:170146000-170167790	3	+	170146107	170167757	0	4	261,176,250,305,	0,14517,20501,21485,
#Deleted in new
chr1	170151377	170151462	chr1:170151377-170151462	3	+	170151377	170151377	5263520	1	85,	0,
#Deleted in new
chr1	170151377	170151462	chr1:170151377-170151462	3	-	170151377	170151377	5263520	1	85,	0,
#Partially deleted in new
chr1	170157968	170167563	chr1:170157968-170167563	0	+	170157968	170157968	8553170	5	149,176,63,250,78,	0,2549,3637,8533,9517,
#Partially deleted in new
chr1	170174402	170241287	chr1:170174402-170241287	3	+	170174402	170174402	8553170	4	304,140,93,223,	0,52516,65827,66662,
#Deleted in new
chr1	170211009	170211457	chr1:170211009-170211457	7	-	170211009	170211009	16724991	1	448,	0,
#Partially deleted in new
chr1	170271602	170278932	chr1:170271602-170278932	3	-	170271602	170271602	8553170	3	379,975,103,	0,1930,7227,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	170271766	170284208	chr1:170271766-170284208	0	-	170271766	170271766	8553170	3	215,103,70,	0,7063,12372,
#Partially deleted in new
chr1	170369222	170370367	chr1:170369222-170370367	7	-	170369222	170369222	16724991	1	1145,	0,
#Partially deleted in new
chr1	170460452	170517706	chr1:170460452-170517706	3	-	170460452	170460452	8553170	2	1967,113,	0,57141,
#Partially deleted in new
chr1	170461316	170494540	chr1:170461316-170494540	0	-	170461316	170461316	8553170	2	1103,260,	0,32964,
#Partially deleted in new
chr1	170462208	170532647	chr1:170462208-170532647	0	-	170462208	170462208	8553170	3	211,110,200,	0,55385,70239,
#Partially deleted in new
chr1	170509960	170532000	chr1:170509960-170532000	1	-	170509960	170509960	8553170	4	460,110,68,117,	0,7633,8458,21923,
#Partially deleted in new
chr1	170532128	170553446	chr1:170532128-170553446	3	+	170532148	170552462	789624	5	156,358,102,141,1432,	0,7081,10362,12576,19886,
#Partially deleted in new
chr1	170532130	170545789	chr1:170532130-170545789	1	+	170532148	170544849	789624	4	154,358,102,1085,	0,7079,10360,12574,
#Partially deleted in new
chr1	170532150	170553446	chr1:170532150-170553446	0	+	170532150	170536366	789624	7	134,188,112,358,102,141,1432,	0,1313,4159,7059,10340,12554,19864,
#Partially deleted in new
chr1	170536274	170539659	chr1:170536274-170539659	0	+	170536274	170536274	8553170	2	147,450,	0,2935,
#Partially deleted in new
chr1	170539061	170553446	chr1:170539061-170553446	0	+	170539061	170539061	8553170	4	510,102,141,1432,	0,3429,5643,12953,
#Partially deleted in new
chr1	170544639	170552276	chr1:170544639-170552276	0	+	170544639	170544639	8553170	2	206,262,	0,7375,
#Deleted in new
chr1	170587248	170588236	chr1:170587248-170588236	3	-	170587248	170587248	8553170	2	70,60,	0,928,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	170598853	170647339	chr1:170598853-170647339	3	+	170598853	170598853	8553170	3	162,689,1072,	0,40255,47414,
#Partially deleted in new
chr1	170662727	170719903	chr1:170662727-170719903	0	+	170662727	170662727	8553170	3	197,154,178,	0,1578,56998,
#Partially deleted in new
chr1	170663133	170736508	chr1:170663133-170736508	1	+	170664218	170730331	789624	5	1326,176,182,72,461,	0,56592,63086,67143,72914,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	170663905	170739419	chr1:170663905-170739419	3	+	170664218	170736186	789624	4	554,176,182,3372,	0,55820,62314,72142,
#Partially deleted in new
chr1	170663936	170729021	chr1:170663936-170729021	1	+	170664218	170726405	789624	3	523,176,2802,	0,55789,62283,
#Deleted in new
chr1	170667380	170669425	chr1:170667380-170669425	3	+	170667380	170667380	8553170	1	2045,	0,
#Partially deleted in new
chr1	170722616	170736399	chr1:170722616-170736399	0	+	170722616	170722616	8553170	3	52,182,352,	0,3603,13431,
#Partially deleted in new
chr1	170722644	170736233	chr1:170722644-170736233	0	+	170722644	170722644	8553170	4	24,182,72,186,	0,3575,7632,13403,
#Deleted in new
chr1	170730205	170736233	chr1:170730205-170736233	0	+	170730205	170730205	8553170	2	143,186,	0,5842,
#Deleted in new
chr1	170730445	170736233	chr1:170730445-170736233	0	+	170730445	170730445	8553170	2	176,186,	0,5602,
#Partially deleted in new
chr1	170935470	171064765	chr1:170935470-171064765	1	+	170945556	171064340	789624	22	117,62,47,80,136,87,105,136,113,150,149,166,143,138,121,138,174,153,117,103,63,667,	0,10049,12056,22990,23991,26419,29680,36277,47951,51090,54384,56693,59918,61036,62683,78646,80692,88924,89178,89847,126661,128628,
#Partially deleted in new
chr1	170935525	170998806	chr1:170935525-170998806	3	+	170945556	170998400	789624	15	62,62,47,80,136,87,105,136,113,150,149,166,143,138,653,	0,9994,12001,22935,23936,26364,29625,36222,47896,51035,54329,56638,59863,60981,62628,
#Partially deleted in new
chr1	170992316	171015143	chr1:170992316-171015143	0	+	170992316	171015018	789624	6	13,143,138,121,138,134,	0,3072,4190,5837,21800,22693,
#Deleted in new
chr1	171083564	171085205	chr1:171083564-171085205	7	+	171083564	171083564	16724991	1	1641,	0,
#Partially deleted in new
chr1	171090876	171117819	chr1:171090876-171117819	3	+	171092658	171117442	789624	9	105,138,189,163,143,200,356,73,720,	0,1776,12908,16798,17202,19921,23130,25331,26223,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	171090900	171100413	chr1:171090900-171100413	0	+	171090900	171090900	8553170	3	81,138,609,	0,1752,8904,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	171090904	171100735	chr1:171090904-171100735	0	+	171090904	171090904	8553170	3	77,138,927,	0,1748,8904,
#Partially deleted in new
chr1	171090916	171107737	chr1:171090916-171107737	0	+	171092658	171101094	789624	5	65,138,127,189,63,	0,1736,10163,12868,16758,
#Partially deleted in new
chr1	171090918	171110878	chr1:171090918-171110878	0	+	171092658	171110878	789624	6	63,138,189,146,106,81,	0,1734,12866,16756,17197,19879,
#Partially deleted in new
chr1	171100761	171107753	chr1:171100761-171107753	0	+	171100761	171100761	8553170	3	445,189,79,	0,3023,6913,
#Deleted in new
chr1	171101727	171101806	chr1:171101727-171101806	3	-	171101727	171101727	5263520	1	79,	0,
#Deleted in new
chr1	171101738	171101798	chr1:171101738-171101798	3	+	171101738	171101738	5263520	1	60,	0,
#Partially deleted in new
chr1	171137739	171161568	chr1:171137739-171161568	5	+	171137739	171137739	16724991	7	905,42,143,200,356,73,411,	0,8738,9886,11820,14170,16402,23418,
#Partially deleted in new
chr1	171137739	171161568	chr1:171137739-171161568	7	+	171137739	171137739	16724991	6	414,143,200,356,73,411,	0,9886,11820,14170,16402,23418,
#Partially deleted in new
chr1	171138102	171146473	chr1:171138102-171146473	4	+	171138102	171138102	16724991	3	241,189,117,	0,5068,8254,
#Partially deleted in new
chr1	171138211	171161396	chr1:171138211-171161396	5	+	171138211	171138211	16724991	8	132,189,163,143,200,356,73,364,	0,4959,8145,9414,11348,13698,15930,22821,
#Partially deleted in new
chr1	171154190	171161568	chr1:171154190-171161568	5	+	171154190	171154190	16724991	2	24,505,	0,6873,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	171185207	171211230	chr1:171185207-171211230	3	+	171185713	171209145	789624	9	152,138,189,163,143,200,356,73,2437,	0,500,8127,11441,14138,18657,20071,22510,23586,
#Partially deleted in new
chr1	171185248	171193510	chr1:171185248-171193510	0	+	171185248	171185248	8553170	4	111,138,55,176,	0,459,3665,8086,
#Partially deleted in new
chr1	171185299	171203989	chr1:171185299-171203989	0	+	171185299	171185299	8553170	4	60,189,143,125,	0,8035,14046,18565,
#Partially deleted in new
chr1	171185299	171209196	chr1:171185299-171209196	0	+	171185299	171203914	789624	7	60,189,163,200,356,73,403,	0,8035,11349,18565,19979,22418,23494,
#Deleted in new
chr1	171185301	171186366	chr1:171185301-171186366	0	+	171185301	171185301	8553170	2	58,659,	0,406,
#Partially deleted in new
chr1	171185523	171196720	chr1:171185523-171196720	0	+	171185713	171196720	789624	3	322,189,72,	0,7811,11125,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	171199243	171224284	chr1:171199243-171224284	1	-	171199243	171199243	8553170	3	272,98,288,	0,4647,24753,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	171199246	171227725	chr1:171199246-171227725	0	-	171199246	171199246	8553170	3	269,98,75,	0,4644,28404,
#Deleted in new
chr1	171207542	171209207	chr1:171207542-171209207	0	+	171207542	171207542	8553170	2	248,414,	0,1251,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	171247579	171251794	chr1:171247579-171251794	3	-	171247579	171247579	8553170	2	144,272,	0,3943,
#Partially deleted in new
chr1	171248470	171285978	chr1:171248470-171285978	1	+	171258087	171285544	789624	8	153,138,163,143,200,356,73,777,	0,9611,26875,30258,32315,33507,34673,36731,
#Partially deleted in new
chr1	171248493	171285965	chr1:171248493-171285965	1	+	171258087	171285544	789624	9	130,138,189,163,143,200,356,73,764,	0,9588,19049,26852,30235,32292,33484,34650,36708,
#Partially deleted in new
chr1	171248498	171285978	chr1:171248498-171285978	3	+	171258087	171285544	789624	9	116,138,189,163,143,200,356,73,777,	0,9583,19044,26847,30230,32287,33479,34645,36703,
#Partially deleted in new
chr1	171257737	171285977	chr1:171257737-171285977	0	+	171258087	171270636	789624	9	113,138,189,169,163,143,200,1239,776,	0,344,9805,12839,17608,20991,23048,24240,27464,
#Partially deleted in new
chr1	171257956	171285974	chr1:171257956-171285974	1	+	171258087	171285544	789624	8	263,189,163,143,200,356,73,773,	0,9586,17389,20772,22829,24021,25187,27245,
#Partially deleted in new
chr1	171258089	171271621	chr1:171258089-171271621	0	+	171258089	171258089	8553170	3	130,189,193,	0,9453,13339,
#Partially deleted in new
chr1	171270953	171271590	chr1:171270953-171271590	7	-	171270953	171270953	16724991	1	637,	0,
#Deleted in new
chr1	171275345	171283196	chr1:171275345-171283196	0	+	171275345	171275345	8553170	5	163,143,200,88,53,	0,3383,5440,6632,7798,
#Partially deleted in new
chr1	171282257	171285521	chr1:171282257-171285521	0	+	171282257	171282257	8553170	2	76,320,	0,2944,
#Partially deleted in new
chr1	171314207	171323192	chr1:171314207-171323192	0	+	171314207	171314207	8553170	3	206,142,189,	0,1978,8796,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	171314233	171342084	chr1:171314233-171342084	3	+	171319825	171341839	789624	10	180,142,140,189,163,143,200,353,70,672,	0,1952,5584,8770,9904,17406,18475,20177,23122,27179,
#Partially deleted in new
chr1	171314233	171337423	chr1:171314233-171337423	0	+	171314233	171314233	8553170	5	180,142,140,189,68,	0,1952,5584,8770,23122,
#Partially deleted in new
chr1	171323105	171333147	chr1:171323105-171333147	0	+	171323105	171323105	8553170	4	87,163,143,439,	0,1032,8534,9603,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	171334525	171342084	chr1:171334525-171342084	0	+	171334525	171334525	8553170	4	238,70,81,140,	0,2830,6887,7419,
#Deleted in new
chr1	171339298	171339959	chr1:171339298-171339959	7	+	171339298	171339298	16724991	1	661,	0,
#Deleted in new
chr1	171345104	171345307	chr1:171345104-171345307	7	-	171345104	171345104	16724991	1	203,	0,
#Deleted in new
chr1	171392228	171392790	chr1:171392228-171392790	7	+	171392228	171392228	16724991	1	562,	0,
#Deleted in new
chr1	171444698	171444963	chr1:171444698-171444963	7	-	171444698	171444698	16724991	1	265,	0,
#Partially deleted in new
chr1	171485550	171593511	chr1:171485550-171593511	1	+	171512088	171591847	789624	34	185,169,178,110,126,224,83,134,88,145,54,619,170,250,211,2259,209,155,904,86,189,252,93,102,202,204,113,137,232,108,219,104,127,1925,	0,26481,27444,28985,30183,32040,36626,37670,37884,39270,42240,46792,49877,50478,51712,54420,59928,64535,71689,75467,80682,81041,82696,85769,89376,91883,93803,94277,98405,98868,101452,102097,102828,106036,
#Partially deleted in new
chr1	171485550	171532775	chr1:171485550-171532775	1	+	171517799	171532720	789624	12	185,169,178,95,126,229,83,134,88,145,54,433,	0,26481,27444,28985,30183,32035,36626,37670,37884,39270,42240,46792,
#Partially deleted in new
chr1	171485550	171532792	chr1:171485550-171532792	0	+	171485550	171485550	8553170	12	185,169,178,95,126,224,83,134,88,145,54,450,	0,26481,27444,28985,30183,32040,36626,37670,37884,39270,42240,46792,
#Partially deleted in new
chr1	171485555	171593511	chr1:171485555-171593511	3	+	171512088	171591847	789624	34	180,169,172,110,126,224,83,134,88,145,54,619,170,250,211,2259,209,155,904,86,189,252,93,102,202,204,113,137,232,108,219,104,127,1925,	0,26476,27445,28980,30178,32035,36621,37665,37879,39265,42235,46787,49872,50473,51707,54415,59923,64530,71684,75462,80677,81036,82691,85764,89371,91878,93798,94272,98400,98863,101447,102092,102823,106031,
#Partially deleted in new
chr1	171485595	171515859	chr1:171485595-171515859	0	+	171485595	171485595	8553170	5	140,169,172,110,126,	0,26436,27405,28940,30138,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	171509559	171515796	chr1:171509559-171515796	0	+	171509559	171509559	8553170	3	3613,95,63,	0,4976,6174,
#Partially deleted in new
chr1	171512031	171593511	chr1:171512031-171593511	1	+	171512088	171591847	789624	33	169,172,110,126,224,83,134,88,145,54,619,170,250,211,2259,209,155,904,86,189,252,93,102,202,204,113,137,232,108,219,104,127,1925,	0,969,2504,3702,5559,10145,11189,11403,12789,15759,20311,23396,23997,25231,27939,33447,38054,45208,48986,54201,54560,56215,59288,62895,65402,67322,67796,71924,72387,74971,75616,76347,79555,
#Partially deleted in new
chr1	171523348	171524870	chr1:171523348-171524870	0	+	171523348	171523348	8553170	2	174,50,	0,1472,
#Partially deleted in new
chr1	171541829	171593511	chr1:171541829-171593511	0	+	171541829	171591847	789624	17	400,209,155,904,86,189,252,202,204,113,137,232,108,219,104,127,1925,	0,3649,8256,15410,19188,24403,24762,33097,35604,37524,37998,42126,42589,45173,45818,46549,49757,
#Partially deleted in new
chr1	171557537	171593506	chr1:171557537-171593506	0	+	171557537	171591847	789624	17	606,86,189,252,93,102,202,204,113,137,232,108,219,104,127,237,1920,	0,3480,8695,9054,10709,13782,17389,19896,21816,22290,26418,26881,29465,30110,30841,31831,34049,
#Partially deleted in new
chr1	171557954	171593258	chr1:171557954-171593258	0	+	171557954	171591659	789624	18	189,83,189,252,93,102,202,204,113,137,232,123,219,104,127,237,53,1672,	0,3066,8278,8637,10292,13365,16972,19479,21399,21873,26001,26464,29048,29693,30424,31414,33197,33632,
#Partially deleted in new
chr1	171587072	171592223	chr1:171587072-171592223	0	+	171587072	171591636	789624	5	149,104,127,49,637,	0,575,1306,4079,4514,
#Partially deleted in new
chr1	171587661	171591313	chr1:171587661-171591313	0	+	171587661	171587661	8553170	3	90,127,162,	0,717,3490,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	171600620	171627747	chr1:171600620-171627747	1	+	171623883	171626601	789624	4	460,208,138,1294,	0,14177,23220,25833,
#Partially deleted in new
chr1	171622215	171638799	chr1:171622215-171638799	3	+	171623883	171638719	789624	4	117,138,139,170,	0,1625,4238,16414,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	171622215	171627747	chr1:171622215-171627747	1	+	171623883	171626601	789624	3	117,138,1294,	0,1625,4238,
#Partially deleted in new
chr1	171635416	171652683	chr1:171635416-171652683	3	-	171635924	171652611	0	3	1293,126,676,	0,3180,16591,
#Partially deleted in new
chr1	171635416	171652629	chr1:171635416-171652629	0	-	171638664	171652611	789624	4	1293,126,4,148,	0,3180,7971,17065,
#Partially deleted in new
chr1	171670516	171670939	chr1:171670516-171670939	7	-	171670516	171670516	16724991	1	423,	0,
#Deleted in new
chr1	171683127	171684438	chr1:171683127-171684438	7	-	171683127	171683127	16724991	1	1311,	0,
#Partially deleted in new
chr1	171700159	171742247	chr1:171700159-171742247	3	-	171704505	171738414	789624	8	4375,52,80,101,51,47,115,338,	0,6207,9505,10554,19011,28364,38189,41750,
#Partially deleted in new
chr1	171701091	171742060	chr1:171701091-171742060	0	-	171704505	171738414	789624	9	993,148,52,80,101,51,47,115,151,	0,3295,5275,8573,9622,18079,27432,37257,40818,
#Partially deleted in new
chr1	171703949	171742074	chr1:171703949-171742074	1	-	171704505	171738414	789624	8	585,52,80,101,48,47,115,165,	0,2417,5715,6764,15221,24574,34399,37960,
#Partially deleted in new
chr1	171704504	171742065	chr1:171704504-171742065	0	-	171704504	171704504	8553170	8	30,52,80,55,51,47,115,156,	0,1862,5160,6255,14666,24019,33844,37405,
#Deleted in new
chr1	171751542	171752025	chr1:171751542-171752025	7	-	171751542	171751542	16724991	2	237,144,	0,339,
#Deleted in new
chr1	171755802	171756323	chr1:171755802-171756323	7	-	171755802	171755802	16724991	1	521,	0,
#Partially deleted in new
chr1	171762073	171762524	chr1:171762073-171762524	7	+	171762073	171762073	16724991	1	451,	0,
#Deleted in new
chr1	171768069	171768175	chr1:171768069-171768175	3	+	171768069	171768069	8553170	1	106,	0,
#Partially deleted in new
chr1	171781663	171786080	chr1:171781663-171786080	0	+	171781663	171781663	8553170	4	132,133,300,194,	0,324,2076,4223,
#Partially deleted in new
chr1	171781681	171797717	chr1:171781681-171797717	1	+	171783844	171796756	0	8	114,760,200,196,165,219,132,1236,	0,2058,4197,6053,8770,10335,12714,14800,
#Partially deleted in new
chr1	171781695	171797717	chr1:171781695-171797717	1	+	171781967	171796756	0	8	425,300,192,196,165,219,132,1236,	0,2044,4191,6039,8756,10321,12700,14786,
#Partially deleted in new
chr1	171781701	171797717	chr1:171781701-171797717	3	+	171781967	171796756	0	8	419,760,200,196,165,219,132,1236,	0,2038,4177,6033,8750,10315,12694,14780,
#Partially deleted in new
chr1	171787824	171790925	chr1:171787824-171790925	0	+	171787824	171787824	8553170	2	106,474,	0,2627,
#Partially deleted in new
chr1	171787862	171796903	chr1:171787862-171796903	0	+	171787862	171787862	8553170	4	68,219,132,422,	0,4154,6533,8619,
#Partially deleted in new
chr1	171794393	171814023	chr1:171794393-171814023	0	+	171794393	171794393	8553170	2	134,149,	0,19481,
#Deleted in new
chr1	171803516	171803939	chr1:171803516-171803939	7	+	171803516	171803516	16724991	1	423,	0,
#Partially deleted in new
chr1	171824609	171824959	chr1:171824609-171824959	7	-	171824609	171824609	16724991	1	350,	0,
#Partially deleted in new
chr1	171841497	172133392	chr1:171841497-172133392	1	+	171841656	172132897	0	15	320,74,150,204,99,161,143,136,68,139,87,71,52,114,504,	0,80250,146158,147447,190904,191607,196821,200511,202887,207114,227321,240334,251326,289677,291391,
#Partially deleted in new
chr1	171841499	172408354	chr1:171841499-172408354	1	+	171841656	172407841	0	21	318,74,150,204,99,161,143,136,68,139,87,71,52,30,114,110,112,165,227,237,583,	0,80248,146156,147445,190902,191605,196819,200509,202885,207112,227319,240332,251324,252196,289675,412073,467228,537518,545633,547073,566272,
#Partially deleted in new
chr1	171841499	172412717	chr1:171841499-172412717	3	+	171841656	172407841	0	20	318,74,150,204,99,161,143,136,68,139,87,71,52,114,110,112,165,227,237,4946,	0,80248,146156,147445,190902,191605,196819,200509,202885,207112,227319,240332,251324,289675,412073,467228,537518,545633,547073,566272,
#Partially deleted in new
chr1	171841499	172412717	chr1:171841499-172412717	1	+	171841656	172407841	0	21	318,74,150,204,99,161,143,136,68,139,87,71,52,114,110,112,12,165,227,237,4946,	0,80248,146156,147445,190902,191605,196819,200509,202885,207112,227319,240332,251324,289675,412073,467228,481829,537518,545633,547073,566272,
#Partially deleted in new
chr1	171841528	172311284	chr1:171841528-172311284	1	+	171841656	172308878	789624	16	289,74,150,204,99,161,143,136,68,139,87,71,52,114,110,2557,	0,80219,146127,147416,190873,191576,196790,200480,202856,207083,227290,240303,251295,289646,412044,467199,
#Deleted in new
chr1	171864186	171864687	chr1:171864186-171864687	3	+	171864186	171864186	789624	2	107,289,	0,212,
#Partially deleted in new
chr1	171970121	172253578	chr1:171970121-172253578	0	+	171987750	172253578	789624	14	124,150,204,99,161,143,136,68,139,87,71,52,114,6,	0,17534,18823,62280,62983,68197,71887,74263,78490,98697,111710,122702,161053,283451,
#Deleted in new
chr1	172138396	172144840	chr1:172138396-172144840	3	-	172138396	172138396	789624	4	2200,78,73,187,	0,3739,5968,6257,
#Deleted in new
chr1	172138797	172138907	chr1:172138797-172138907	3	-	172138797	172138797	5263520	1	110,	0,
#Deleted in new
chr1	172138807	172138888	chr1:172138807-172138888	3	+	172138807	172138807	5263520	1	81,	0,
#Deleted in new
chr1	172138881	172144582	chr1:172138881-172144582	0	-	172138881	172138881	8553170	4	72,117,73,25,	0,1598,5483,5676,
#Deleted in new
chr1	172139954	172142654	chr1:172139954-172142654	0	-	172139954	172139954	8553170	2	642,519,	0,2181,
#Deleted in new
chr1	172140051	172144619	chr1:172140051-172144619	0	-	172140051	172140051	8553170	3	545,78,255,	0,2084,4313,
#Deleted in new
chr1	172140218	172144741	chr1:172140218-172144741	0	-	172140218	172140218	8553170	4	378,98,73,184,	0,1917,4146,4339,
#Deleted in new
chr1	172140448	172144568	chr1:172140448-172144568	0	-	172140448	172140448	8553170	4	148,78,73,11,	0,1687,3916,4109,
#Deleted in new
chr1	172144534	172144644	chr1:172144534-172144644	3	-	172144534	172144534	5263520	1	110,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	172366539	172366646	chr1:172366539-172366646	3	+	172366539	172366539	8553170	1	107,	0,
#Partially deleted in new
chr1	172370188	172415326	chr1:172370188-172415326	0	-	172370188	172370188	8553170	5	123,83,128,98,33,	0,6365,7942,29630,45105,
#Deleted in new
chr1	172376130	172380906	chr1:172376130-172380906	0	-	172376130	172376130	8553170	3	300,83,164,	0,423,4612,
#Partially deleted in new
chr1	172379017	172418466	chr1:172379017-172418466	0	+	172379017	172418317	789624	4	165,227,237,186,	0,8115,9555,39263,
#Partially deleted in new
chr1	172380920	172415376	chr1:172380920-172415376	0	-	172380920	172380920	8553170	4	53,177,98,83,	0,5860,18898,34373,
#Partially deleted in new
chr1	172387187	172389222	chr1:172387187-172389222	0	+	172387187	172387187	8553170	2	172,650,	0,1385,
#Partially deleted in new
chr1	172393133	172444083	chr1:172393133-172444083	0	-	172393133	172393133	8553170	5	1277,109,98,81,96,	0,4030,6685,22160,50854,
#Partially deleted in new
chr1	172420687	172468829	chr1:172420687-172468829	3	+	172420885	172468594	789624	7	219,86,91,75,68,65,381,	0,24385,27753,35727,41490,44611,47761,
#Deleted in new
chr1	172441456	172444060	chr1:172441456-172444060	1	-	172441728	172442622	789624	2	1374,73,	0,2531,
#Deleted in new
chr1	172441456	172444086	chr1:172441456-172444086	3	-	172441728	172442622	789624	1	2630,	0,
#Deleted in new
chr1	172442330	172443946	chr1:172442330-172443946	0	-	172442330	172442330	8553170	2	500,244,	0,1372,
#Partially deleted in new
chr1	172445138	172465681	chr1:172445138-172465681	0	+	172445138	172465665	789624	6	20,91,75,68,65,75,	0,3302,11276,17039,20160,20468,
#Partially deleted in new
chr1	172451040	172468827	chr1:172451040-172468827	0	+	172451040	172451040	8553170	4	77,68,65,379,	0,11137,14258,17408,
#Partially deleted in new
chr1	172452892	172468831	chr1:172452892-172468831	1	+	172453021	172468594	789624	5	297,75,68,65,383,	0,3522,9285,12406,15556,
#Partially deleted in new
chr1	172532348	172611833	chr1:172532348-172611833	1	+	172532472	172610259	789624	23	450,321,115,155,138,151,124,125,68,108,106,56,92,66,69,91,1167,88,105,155,92,56,2018,	0,828,19163,23520,24931,25295,36670,37698,38314,41542,43169,45415,45949,46853,52669,53509,56411,58635,67715,69715,70347,76398,77467,
#Partially deleted in new
chr1	172532472	172611831	chr1:172532472-172611831	1	+	172532472	172610259	789624	23	327,320,115,155,138,151,124,125,68,108,106,56,92,66,69,91,1167,88,105,155,92,56,2016,	0,705,19039,23396,24807,25171,36546,37574,38190,41418,43045,45291,45825,46729,52545,53385,56287,58511,67591,69591,70223,76274,77343,
#Partially deleted in new
chr1	172533117	172611831	chr1:172533117-172611831	1	+	172588790	172610259	789624	22	380,115,111,155,138,151,124,125,68,108,106,21,56,92,66,1167,88,105,155,92,56,2016,	0,18394,20142,22751,24162,24526,35901,36929,37545,40773,42400,44421,44646,45180,46084,55642,57866,66946,68946,69578,75629,76698,
#Partially deleted in new
chr1	172533182	172610279	chr1:172533182-172610279	1	+	172533435	172610259	789624	23	315,115,155,138,151,124,125,68,108,106,21,56,92,66,69,91,165,88,105,155,92,56,464,	0,18329,22686,24097,24461,35836,36864,37480,40708,42335,44356,44581,45115,46019,51835,52675,55577,57801,66881,68881,69513,75564,76633,
#Partially deleted in new
chr1	172533216	172611831	chr1:172533216-172611831	3	+	172533435	172610259	789624	24	281,115,111,155,138,151,124,125,68,108,106,21,56,92,66,69,91,1167,88,105,155,92,56,2016,	0,18295,20043,22652,24063,24427,35802,36830,37446,40674,42301,44322,44547,45081,45985,51801,52641,55543,57767,66847,68847,69479,75530,76599,
#Partially deleted in new
chr1	172533382	172552152	chr1:172533382-172552152	0	+	172533382	172533382	8553170	2	115,641,	0,18129,
#Partially deleted in new
chr1	172553329	172570796	chr1:172553329-172570796	0	+	172553329	172553329	8553170	7	41,155,138,151,124,125,134,	0,2539,3950,4314,15689,16717,17333,
#Deleted in new
chr1	172569026	172570513	chr1:172569026-172570513	0	+	172569026	172569026	8553170	2	116,467,	0,1020,
#Deleted in new
chr1	172602148	172603205	chr1:172602148-172603205	0	+	172602148	172602148	8553170	2	70,510,	0,547,
#Partially deleted in new
chr1	172608312	172610086	chr1:172608312-172610086	0	+	172608312	172608312	8553170	2	490,271,	0,1503,
#Deleted in new
chr1	172613427	172613534	chr1:172613427-172613534	3	-	172613427	172613427	8553170	1	107,	0,
#Deleted in new
chr1	172659017	172666874	chr1:172659017-172666874	3	+	172659201	172666016	0	4	532,46,57,1253,	0,1077,5316,6604,
#Deleted in new
chr1	172659143	172666075	chr1:172659143-172666075	1	+	172659201	172664369	0	3	406,57,454,	0,5190,6478,
#Deleted in new
chr1	172748559	172749502	chr1:172748559-172749502	7	+	172748559	172748559	16724991	1	943,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	172752585	172752924	chr1:172752585-172752924	3	+	172752585	172752585	8553170	1	339,	0,
#Deleted in new
chr1	172885946	172886258	chr1:172885946-172886258	7	-	172885946	172885946	16724991	1	312,	0,
#Deleted in new
chr1	172906899	172907684	chr1:172906899-172907684	3	+	172906899	172906899	8553170	2	353,305,	0,480,
#Partially deleted in new
chr1	173039959	173050963	chr1:173039959-173050963	3	-	173041366	173050962	0	3	1754,31,223,	0,3979,10781,
#Deleted in new
chr1	173141099	173142350	chr1:173141099-173142350	7	-	173141099	173141099	16724991	1	1251,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	173174299	173175503	chr1:173174299-173175503	3	-	173174299	173174299	8553170	2	275,415,	0,789,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	173183733	173205558	chr1:173183733-173205558	1	-	173186515	173205313	0	3	3132,49,248,	0,4787,21577,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	173183734	173207313	chr1:173183734-173207313	3	-	173186515	173207176	0	3	3131,49,290,	0,4786,23289,
#Partially deleted in new
chr1	173188463	173205724	chr1:173188463-173205724	0	-	173188463	173188463	8553170	2	106,414,	0,16847,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	173351688	173352004	chr1:173351688-173352004	7	+	173351688	173351688	16724991	1	316,	0,
#Deleted in new
chr1	173362396	173363733	chr1:173362396-173363733	7	-	173362396	173362396	16724991	1	1337,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	173417792	173461362	chr1:173417792-173461362	3	-	173417792	173417792	789624	2	830,985,	0,42585,
#Partially deleted in new
chr1	173418073	173442097	chr1:173418073-173442097	1	-	173418073	173418073	8553170	3	549,288,179,	0,22389,23845,
#Partially deleted in new
chr1	173477265	173488807	chr1:173477265-173488807	3	+	173477397	173487863	0	5	227,157,147,147,1073,	0,4060,8095,8989,10469,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	173477329	173481971	chr1:173477329-173481971	0	+	173477329	173477329	8553170	2	163,646,	0,3996,
#Partially deleted in new
chr1	173481198	173488015	chr1:173481198-173488015	0	+	173481198	173481198	8553170	4	284,147,147,281,	0,4162,5056,6536,
#Partially deleted in new
chr1	173500463	173603094	chr1:173500463-173603094	3	-	173501093	173601776	789624	28	634,61,85,186,132,168,99,126,149,52,150,189,199,120,98,96,164,82,169,144,100,162,117,166,129,101,206,344,	0,2802,4783,6392,9104,17073,20837,23505,24315,26199,29441,33145,34020,35366,36478,47225,47925,54269,56876,72718,76197,81383,83042,87201,97440,99653,101186,102287,
#Partially deleted in new
chr1	173500469	173576751	chr1:173500469-173576751	0	-	173500469	173500469	8553170	21	628,61,85,186,132,168,99,126,149,52,150,189,199,120,98,96,164,169,227,144,91,	0,2796,4777,6386,9098,17067,20831,23499,24309,26193,29435,33139,34014,35360,36472,47219,47919,56870,71032,72712,76191,
#Partially deleted in new
chr1	173521214	173556205	chr1:173521214-173556205	0	-	173521214	173521214	8553170	11	185,126,149,52,150,189,98,96,164,82,139,	0,2754,3564,5448,8690,12394,15727,26474,27174,33518,34852,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	173555250	173612772	chr1:173555250-173612772	3	+	173555250	173555250	8553170	3	68,460,149,	0,47521,57373,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	173596059	173669837	chr1:173596059-173669837	3	-	173610144	173659418	8553170	8	619,129,272,139,95,168,343,21,	0,1844,13884,28727,31005,50786,63031,73757,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	173596417	173603053	chr1:173596417-173603053	0	-	173596417	173596417	8553170	4	261,129,67,303,	0,1486,5232,6333,
#Partially deleted in new
chr1	173597905	173601752	chr1:173597905-173601752	0	-	173597905	173597905	8553170	2	127,103,	0,3744,
#Partially deleted in new
chr1	173609560	173669862	chr1:173609560-173669862	3	-	173610144	173659418	789624	6	655,139,95,168,343,46,	0,15226,17504,37285,49530,60256,
#Deleted in new
chr1	173635332	173637134	chr1:173635332-173637134	3	+	173635521	173637036	789624	2	513,308,	0,1494,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	173657625	173669832	chr1:173657625-173669832	0	-	173657625	173657625	8553170	2	1808,16,	0,12191,
#Partially deleted in new
chr1	173714940	173733828	chr1:173714940-173733828	0	+	173714940	173714940	8553170	4	138,132,64,116,	0,582,1062,18772,
#Partially deleted in new
chr1	173714983	173786702	chr1:173714983-173786702	3	+	173716043	173785247	789624	12	95,64,574,159,95,116,184,144,134,209,107,1540,	0,1019,18729,36780,38229,40939,41992,51162,59321,60650,67140,70179,
#Partially deleted in new
chr1	173715302	173734217	chr1:173715302-173734217	0	+	173715302	173715302	8553170	3	352,64,505,	0,700,18410,
#Partially deleted in new
chr1	173715566	173734513	chr1:173715566-173734513	0	+	173715566	173715566	8553170	3	88,64,801,	0,436,18146,
#Deleted in new
chr1	173741673	173741928	chr1:173741673-173741928	7	+	173741673	173741673	16724991	1	255,	0,
#Partially deleted in new
chr1	173781912	173785513	chr1:173781912-173785513	0	+	173781912	173781912	8553170	2	318,351,	0,3250,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	173791547	173791887	chr1:173791547-173791887	3	+	173791547	173791547	8553170	1	340,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	173799549	173824322	chr1:173799549-173824322	1	-	173800447	173811299	789624	7	970,543,138,252,175,94,185,	0,3413,6889,7717,11582,24376,24588,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	173799849	173824132	chr1:173799849-173824132	1	-	173800447	173811299	789624	5	670,543,252,175,207,	0,3113,7417,11282,24076,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	173799849	173824174	chr1:173799849-173824174	3	-	173800447	173811299	789624	6	670,543,252,175,94,37,	0,3113,7417,11282,24076,24288,
#Partially deleted in new
chr1	173800411	173824335	chr1:173800411-173824335	0	-	173800411	173800411	8553170	5	108,252,175,94,198,	0,6855,10720,23514,23726,
#Partially deleted in new
chr1	173802962	173824019	chr1:173802962-173824019	0	-	173802962	173802962	8553170	4	543,44,175,94,	0,4304,8169,20963,
#Partially deleted in new
chr1	173803445	173824720	chr1:173803445-173824720	0	-	173803445	173803445	8553170	5	60,252,175,94,159,	0,3821,7686,20480,21116,
#Partially deleted in new
chr1	173811119	173824145	chr1:173811119-173824145	0	-	173811119	173811119	8553170	2	187,220,	0,12806,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	173821808	173824473	chr1:173821808-173824473	0	-	173821808	173821808	8553170	2	2211,262,	0,2403,
#Partially deleted in new
chr1	173824567	173858546	chr1:173824567-173858546	3	+	173825229	173857705	0	17	789,100,67,102,96,124,47,107,70,180,108,63,153,219,111,76,1029,	0,2119,3765,6092,6967,8808,9905,12372,13622,14799,16298,20661,25759,28781,29227,32098,32950,
#Partially deleted in new
chr1	173824652	173858400	chr1:173824652-173858400	1	+	173825229	173857705	8553170	16	704,100,67,102,96,124,47,107,70,180,108,63,219,111,76,883,	0,2034,3680,6007,6882,8723,9820,12287,13537,14714,16213,20576,28696,29142,32013,32865,
#Partially deleted in new
chr1	173824652	173858389	chr1:173824652-173858389	1	+	173825229	173857705	8553170	14	704,100,67,102,96,124,47,107,70,180,108,63,76,872,	0,2034,3680,6007,6882,8723,9820,12287,13537,14714,16213,20576,32013,32865,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	173824660	173858808	chr1:173824660-173858808	0	+	173825229	173830675	8553170	12	696,100,102,96,124,47,107,70,180,108,76,1291,	0,2026,5999,6874,8715,9812,12279,13529,14706,16205,32005,32857,
#Partially deleted in new
chr1	173824662	173858400	chr1:173824662-173858400	0	+	173825229	173830675	8553170	16	694,100,102,96,124,47,107,70,180,108,63,153,219,111,76,883,	0,2024,5997,6872,8713,9810,12277,13527,14704,16203,20566,25664,28686,29132,32003,32855,
#Partially deleted in new
chr1	173824662	173858397	chr1:173824662-173858397	1	+	173825229	173856764	8553170	15	694,100,67,102,96,124,47,107,70,180,108,63,219,111,1732,	0,2024,3670,5997,6872,8713,9810,12277,13527,14704,16203,20566,28686,29132,32003,
#Partially deleted in new
chr1	173824672	173858542	chr1:173824672-173858542	1	+	173825229	173857705	789624	17	684,100,67,102,96,124,47,107,70,180,108,63,153,219,111,76,1025,	0,2014,3660,5987,6862,8703,9800,12267,13517,14694,16193,20556,25654,28676,29122,31993,32845,
#Partially deleted in new
chr1	173824683	173857873	chr1:173824683-173857873	0	+	173825229	173830675	8553170	15	673,100,102,96,124,47,107,70,180,108,63,153,219,111,1208,	0,2003,5976,6851,8692,9789,12256,13506,14683,16182,20545,25643,28665,29111,31982,
#Partially deleted in new
chr1	173824707	173858517	chr1:173824707-173858517	1	+	173825229	173857705	8553170	16	649,100,67,102,96,124,47,107,70,180,108,153,219,111,76,1000,	0,1979,3625,5952,6827,8668,9765,12232,13482,14659,16158,25619,28641,29087,31958,32810,
#Partially deleted in new
chr1	173824711	173858502	chr1:173824711-173858502	0	+	173825229	173830675	8553170	15	645,100,102,96,124,47,107,70,180,108,63,153,219,76,985,	0,1975,5948,6823,8664,9761,12228,13478,14655,16154,20517,25615,28637,31954,32806,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	173824842	173831027	chr1:173824842-173831027	0	+	173824842	173824842	8553170	3	514,1713,368,	0,1844,5817,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	173824846	173854646	chr1:173824846-173854646	0	+	173824846	173824846	8553170	14	510,100,67,102,96,124,47,107,70,180,108,63,153,1298,	0,1840,3486,5813,6688,8529,9626,12093,13343,14520,16019,20382,25480,28502,
#Partially deleted in new
chr1	173824959	173852014	chr1:173824959-173852014	1	+	173825229	173851940	8553170	14	397,100,67,102,96,124,47,107,70,180,108,63,153,179,	0,1727,3373,5700,6575,8416,9513,11980,13230,14407,15906,20269,25367,26876,
#Partially deleted in new
chr1	173833427	173853836	chr1:173833427-173853836	0	+	173833427	173853836	8553170	8	72,47,180,108,63,153,219,42,	0,1045,5939,7438,11801,16899,19921,20367,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	173863247	173863941	chr1:173863247-173863941	3	+	173863247	173863247	789624	1	694,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	173863899	173867989	chr1:173863899-173867989	1	-	173863899	173863899	789624	11	176,48,23,30,38,38,30,40,36,53,30,	0,357,584,775,1610,1957,2277,2628,2861,3091,4060,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	173863900	173867987	chr1:173863900-173867987	0	-	173863900	173863900	8553170	10	175,448,54,77,38,30,40,36,53,28,	0,356,1328,1570,1956,2276,2627,2860,3090,4059,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	173863900	173866206	chr1:173863900-173866206	1	-	173863900	173863900	8553170	7	175,48,30,54,38,38,30,	0,356,774,1328,1609,1956,2276,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	173863900	173868882	chr1:173863900-173868882	3	-	173863900	173863900	789624	13	175,48,23,30,54,38,38,30,40,36,53,29,129,	0,356,583,774,1328,1609,1956,2276,2627,2860,3090,4080,4853,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	173863900	173867989	chr1:173863900-173867989	0	-	173863900	173863900	8553170	8	175,1026,77,38,30,269,53,30,	0,356,1570,1956,2276,2627,3090,4059,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	173863900	173867043	chr1:173863900-173867043	0	-	173863900	173863900	8553170	10	175,48,221,54,77,38,30,40,36,53,	0,356,583,1328,1570,1956,2276,2627,2860,3090,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	173863900	173867989	chr1:173863900-173867989	0	-	173863900	173863900	8553170	11	175,48,23,30,319,38,30,40,36,53,30,	0,356,583,774,1328,1956,2276,2627,2860,3090,4059,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	173863900	173867043	chr1:173863900-173867043	1	-	173863900	173863900	8553170	11	175,48,23,30,54,38,38,30,40,36,53,	0,356,583,774,1328,1609,1956,2276,2627,2860,3090,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	173863900	173867987	chr1:173863900-173867987	1	-	173863900	173863900	789624	12	175,48,23,30,54,77,38,30,40,36,53,28,	0,356,583,774,1328,1570,1956,2276,2627,2860,3090,4059,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	173863900	173867983	chr1:173863900-173867983	1	-	173863900	173863900	8553170	9	175,48,23,30,54,40,36,53,24,	0,356,583,774,1328,2627,2860,3090,4059,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	173863900	173867043	chr1:173863900-173867043	0	-	173863900	173863900	8553170	9	404,30,54,38,38,30,40,36,53,	0,774,1328,1609,1956,2276,2627,2860,3090,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	173863901	173867043	chr1:173863901-173867043	0	-	173863901	173863901	8553170	10	403,23,30,54,38,38,30,40,36,53,	0,582,773,1327,1608,1955,2275,2626,2859,3089,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	173863901	173864871	chr1:173863901-173864871	0	-	173863901	173863901	8553170	3	174,250,197,	0,355,773,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	173863903	173864906	chr1:173863903-173864906	0	-	173863903	173863903	8553170	3	172,48,423,	0,353,580,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	173863910	173867815	chr1:173863910-173867815	1	-	173863910	173863910	8553170	12	165,48,23,30,54,77,38,30,40,36,53,94,	0,346,573,764,1318,1560,1946,2266,2617,2850,3080,3811,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	173863953	173864905	chr1:173863953-173864905	0	-	173863953	173863953	8553170	4	122,48,23,231,	0,303,530,721,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	173863979	173864901	chr1:173863979-173864901	0	-	173863979	173863979	8553170	3	325,23,227,	0,504,695,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	173864033	173867729	chr1:173864033-173867729	1	-	173864033	173864033	8553170	12	42,48,23,30,54,38,38,30,40,36,53,575,	0,223,450,641,1195,1476,1823,2143,2494,2727,2957,3121,
#Partially deleted in new
chr1	173864483	173867030	chr1:173864483-173867030	0	-	173864483	173864483	8553170	8	221,54,38,38,30,40,36,40,	0,745,1026,1373,1693,2044,2277,2507,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	173864630	173867043	chr1:173864630-173867043	0	-	173864630	173864630	8553170	6	917,38,30,40,36,53,	0,1226,1546,1897,2130,2360,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	173864954	173867989	chr1:173864954-173867989	0	-	173864954	173864954	8553170	8	328,77,38,30,40,36,53,30,	0,516,902,1222,1573,1806,2036,3005,
#Partially deleted in new
chr1	173865167	173867988	chr1:173865167-173867988	0	-	173865167	173865167	8553170	6	380,38,30,269,53,29,	0,689,1009,1360,1823,2792,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	173865243	173867689	chr1:173865243-173867689	1	-	173865243	173865243	8553170	7	39,77,38,30,40,36,699,	0,227,613,933,1284,1517,1747,
#Partially deleted in new
chr1	173865248	173867991	chr1:173865248-173867991	0	-	173865248	173865248	8553170	7	34,38,350,40,36,53,32,	0,261,608,1279,1512,1742,2711,
#Partially deleted in new
chr1	173865352	173867989	chr1:173865352-173867989	0	-	173865352	173865352	8553170	5	195,350,269,53,30,	0,504,1175,1638,2607,
#Partially deleted in new
chr1	173865817	173867987	chr1:173865817-173867987	0	-	173865817	173865817	8553170	3	979,53,28,	0,1173,2142,
#Deleted in new
chr1	173865866	173867040	chr1:173865866-173867040	1	-	173865866	173865866	8553170	5	86,30,40,36,50,	0,310,661,894,1124,
#Partially deleted in new
chr1	173866215	173867987	chr1:173866215-173867987	0	-	173866215	173866215	8553170	4	352,36,53,28,	0,545,775,1744,
#Partially deleted in new
chr1	173868081	173886636	chr1:173868081-173886636	1	+	173870225	173885639	789624	4	174,196,952,1001,	0,843,2115,17554,
#Partially deleted in new
chr1	173868354	173886636	chr1:173868354-173886636	1	+	173870225	173886124	789624	5	51,196,952,100,1001,	0,570,1842,5112,17281,
#Partially deleted in new
chr1	173868393	173873643	chr1:173868393-173873643	1	+	173870225	173873629	789624	4	12,196,952,177,	0,531,1803,5073,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	173868955	173903549	chr1:173868955-173903549	3	+	173870225	173886124	789624	4	165,949,100,17914,	0,1244,4511,16680,
#Partially deleted in new
chr1	173903803	173917378	chr1:173903803-173917378	1	-	173903888	173917259	789624	5	262,44,151,367,160,	0,3646,8060,10749,13415,
#Partially deleted in new
chr1	173903808	173917378	chr1:173903808-173917378	3	-	173903888	173917259	0	7	257,65,391,138,216,367,160,	0,3641,5743,6945,7990,10744,13410,
#Partially deleted in new
chr1	173909729	173914665	chr1:173909729-173914665	0	-	173909729	173909729	8553170	4	213,84,216,113,	0,1024,2069,4823,
#Partially deleted in new
chr1	173911979	173917316	chr1:173911979-173917316	0	-	173911979	173911979	8553170	4	35,367,169,98,	0,2573,3038,5239,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	173921069	173921200	chr1:173921069-173921200	7	+	173921069	173921069	16724991	1	131,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	173931213	173993064	chr1:173931213-173993064	1	-	173938720	173992985	0	19	7658,116,174,133,91,214,153,168,371,215,282,113,119,133,201,176,240,121,310,	0,10051,12228,15262,15532,16155,20772,29863,30511,32759,33625,39291,41295,47274,49595,51513,52204,53285,61541,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	173931213	174022297	chr1:173931213-174022297	3	-	173938720	173992985	0	20	7658,116,174,133,91,214,153,168,371,215,282,113,119,133,201,176,240,121,381,202,	0,10051,12228,15262,15532,16155,20772,29863,30511,32759,33625,39291,41295,47274,49595,51513,52204,53285,61541,90882,
#Partially deleted in new
chr1	173938410	173993072	chr1:173938410-173993072	1	-	173938720	173992985	0	19	464,116,147,133,91,214,153,168,371,215,282,113,119,133,201,176,240,121,318,	0,2854,5031,8065,8335,8958,13575,22666,23314,25562,26428,32094,34098,40077,42398,44316,45007,46088,54344,
#Partially deleted in new
chr1	173938575	173941449	chr1:173938575-173941449	0	-	173938575	173938575	8553170	2	296,185,	0,2689,
#Partially deleted in new
chr1	173961032	173961815	chr1:173961032-173961815	0	-	173961032	173961032	8553170	2	212,91,	0,692,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	173969317	173969436	chr1:173969317-173969436	7	-	173969317	173969317	16724991	1	119,	0,
#Partially deleted in new
chr1	173980948	173983033	chr1:173980948-173983033	0	-	173980948	173980948	8553170	2	61,307,	0,1778,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	174009266	174016206	chr1:174009266-174016206	3	-	174009266	174009266	8553170	2	95,353,	0,6587,
#Deleted in new
chr1	174022508	174022985	chr1:174022508-174022985	3	+	174022508	174022508	8553170	2	132,203,	0,274,
#Deleted in new
chr1	174090135	174090474	chr1:174090135-174090474	7	-	174090135	174090135	16724991	1	339,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	174115299	174159153	chr1:174115299-174159153	1	-	174115299	174115299	8553170	3	350,71,267,	0,40327,43587,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	174115382	174160004	chr1:174115382-174160004	3	-	174115382	174115382	8553170	4	267,109,71,88,	0,6701,40244,44534,
#Partially deleted in new
chr1	174115600	174159133	chr1:174115600-174159133	0	-	174115600	174115600	8553170	3	43,71,247,	0,40026,43286,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	174121637	174159287	chr1:174121637-174159287	1	-	174121637	174121637	789624	4	149,71,104,124,	0,33989,37249,37526,
#Partially deleted in new
chr1	174159409	174548561	chr1:174159409-174548561	1	+	174219157	174548055	0	14	248,60,193,211,175,158,111,67,103,167,142,94,151,725,	0,59715,61562,71735,82073,91065,93070,113004,116423,119203,145576,211569,234585,388427,
#Partially deleted in new
chr1	174159516	174958182	chr1:174159516-174958182	3	+	174219157	174957905	0	21	141,171,193,211,175,158,111,67,103,167,142,94,151,114,75,126,144,42,129,93,292,	0,59608,61455,71628,81966,90958,92963,112897,116316,119096,145469,211462,234478,477858,524005,540008,542596,592796,652315,797940,798374,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	174159580	174246346	chr1:174159580-174246346	0	+	174219157	174243002	789624	7	77,171,193,211,175,198,2049,	0,59544,61391,71564,81902,83401,84717,
#Partially deleted in new
chr1	174159589	174394145	chr1:174159589-174394145	0	+	174219157	174394145	789624	13	68,171,193,211,175,158,147,67,103,167,142,94,151,	0,59535,61382,71555,81893,90885,92854,112824,116243,119023,145396,211389,234405,
#Partially deleted in new
chr1	174220711	174231245	chr1:174220711-174231245	0	+	174220711	174220711	8553170	2	453,101,	0,10433,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	174275099	174545911	chr1:174275099-174545911	1	+	174275838	174544951	789624	7	90,103,167,142,94,151,1068,	0,733,3513,29886,95879,118895,269744,
#Partially deleted in new
chr1	174365229	174637488	chr1:174365229-174637488	0	+	174365229	174365229	8553170	4	80,94,151,114,	0,5749,28765,272145,
#Deleted in new
chr1	174367104	174368039	chr1:174367104-174368039	7	-	174367104	174367104	16724991	1	935,	0,
#Deleted in new
chr1	174448110	174449198	chr1:174448110-174449198	3	+	174448111	174449197	789624	1	1088,	0,
#Partially deleted in new
chr1	174637377	174705750	chr1:174637377-174705750	0	+	174637377	174705245	789624	5	111,75,126,144,550,	0,46144,62147,64735,67823,
#Partially deleted in new
chr1	174700412	174957529	chr1:174700412-174957529	0	+	174702166	174957529	789624	5	334,144,42,129,73,	0,1700,51900,111419,257044,
#Partially deleted in new
chr1	174700524	174990409	chr1:174700524-174990409	1	+	174702166	174990001	0	11	341,144,42,129,93,111,105,84,72,198,561,	0,1588,51788,111307,256932,268752,275553,278282,282309,288116,289324,
#Partially deleted in new
chr1	174700730	174990341	chr1:174700730-174990341	0	+	174702166	174877424	789624	13	135,144,42,129,214,93,283,111,105,84,72,198,493,	0,1382,51582,111101,176661,256726,257160,268546,275347,278076,282103,287910,289118,
#Partially deleted in new
chr1	174701019	174990593	chr1:174701019-174990593	1	+	174701142	174990001	0	11	126,144,42,129,93,111,105,84,72,198,745,	0,1093,51293,110812,256437,268257,275058,277787,281814,287621,288829,
#Partially deleted in new
chr1	174701021	174990513	chr1:174701021-174990513	1	+	174701116	174990001	0	11	101,144,42,129,93,111,105,84,72,198,665,	0,1091,51291,110810,256435,268255,275056,277785,281812,287619,288827,
#Deleted in new
chr1	174756849	174757119	chr1:174756849-174757119	7	-	174756849	174756849	16724991	1	270,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	174799931	174995308	chr1:174799931-174995308	1	+	174800332	174990001	0	9	569,129,93,111,105,84,72,198,5460,	0,11900,157525,169345,176146,178875,182902,188709,189917,
#Deleted in new
chr1	174849666	174850168	chr1:174849666-174850168	7	-	174849666	174849666	16724991	1	502,	0,
#Partially deleted in new
chr1	174874457	174958182	chr1:174874457-174958182	1	+	174877494	174957905	0	4	49,214,93,292,	0,2934,82999,83433,
#Partially deleted in new
chr1	174874470	174982900	chr1:174874470-174982900	0	+	174877494	174982900	789624	7	36,214,93,111,105,84,67,	0,2921,82986,94806,101607,104336,108363,
#Partially deleted in new
chr1	174875545	174958187	chr1:174875545-174958187	1	+	174877494	174957905	0	4	168,214,93,297,	0,1846,81911,82345,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	174877439	174995301	chr1:174877439-174995301	1	+	174877494	174990001	789624	8	166,93,111,105,84,72,198,5453,	0,80017,91837,98638,101367,105394,111201,112409,
#Partially deleted in new
chr1	174892416	174893155	chr1:174892416-174893155	7	+	174892416	174892416	16724991	2	286,109,	0,630,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	174896957	174897996	chr1:174896957-174897996	3	+	174896957	174896957	8553170	2	517,220,	0,819,
#Deleted in new
chr1	174922106	174922440	chr1:174922106-174922440	7	-	174922106	174922106	16724991	1	334,	0,
#Partially deleted in new
chr1	174934946	174954261	chr1:174934946-174954261	3	-	174934946	174934946	789624	6	154,108,78,71,154,105,	0,452,3500,10877,13776,19210,
#Partially deleted in new
chr1	174945522	174948876	chr1:174945522-174948876	1	-	174945522	174945522	8553170	2	372,154,	0,3200,
#Partially deleted in new
chr1	174964767	174990485	chr1:174964767-174990485	1	+	174964946	174990001	789624	7	218,111,105,84,72,198,637,	0,4509,11310,14039,18066,23873,25081,
#Partially deleted in new
chr1	174964958	174993880	chr1:174964958-174993880	0	+	174964958	174993607	789624	4	27,111,105,294,	0,4318,11119,28628,
#Partially deleted in new
chr1	174976028	174988807	chr1:174976028-174988807	0	+	174976028	174976028	8553170	4	154,84,72,167,	0,2778,6805,12612,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	174996523	174996629	chr1:174996523-174996629	3	+	174996523	174996523	8553170	1	106,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	174999162	175011715	chr1:174999162-175011715	1	+	175004727	175010079	0	6	527,220,97,100,98,1793,	0,5451,7582,7935,9446,10760,
#Partially deleted in new
chr1	174999434	175004750	chr1:174999434-175004750	0	+	175000180	175004750	789624	3	255,107,137,	0,654,5179,
#Partially deleted in new
chr1	174999470	175004968	chr1:174999470-175004968	0	+	174999470	174999470	8553170	2	219,355,	0,5143,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	174999732	175011710	chr1:174999732-175011710	3	+	175000180	175010079	0	6	463,220,97,100,98,1788,	0,4881,7012,7365,8876,10190,
#Partially deleted in new
chr1	174999944	175005050	chr1:174999944-175005050	0	+	174999944	174999944	8553170	2	251,437,	0,4669,
#Partially deleted in new
chr1	174999954	175008754	chr1:174999954-175008754	0	+	174999954	174999954	8553170	5	241,220,97,100,146,	0,4659,6790,7143,8654,
#Partially deleted in new
chr1	175000180	175006771	chr1:175000180-175006771	1	+	175000180	175006771	0	3	15,201,27,	0,4433,6564,
#Partially deleted in new
chr1	175000212	175010079	chr1:175000212-175010079	1	+	175004727	175010079	0	6	387,220,97,100,98,157,	0,4401,6532,6885,8396,9710,
#Partially deleted in new
chr1	175006582	175008897	chr1:175006582-175008897	0	+	175006582	175006582	8553170	2	615,289,	0,2026,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	175010788	175014824	chr1:175010788-175014824	0	-	175010788	175010788	8553170	3	308,79,152,	0,884,3884,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	175012957	175023425	chr1:175012957-175023425	3	-	175014668	175023408	0	3	1894,159,62,	0,5460,10406,
#Partially deleted in new
chr1	175014244	175023415	chr1:175014244-175023415	0	-	175018530	175023408	789624	3	607,159,144,	0,4173,9027,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	175022478	175022580	chr1:175022478-175022580	3	-	175022478	175022478	8553170	1	102,	0,
#Deleted in new
chr1	175044625	175045648	chr1:175044625-175045648	7	-	175044625	175044625	16724991	1	1023,	0,
#Partially deleted in new
chr1	175067857	175148066	chr1:175067857-175148066	3	+	175077418	175147071	789624	19	78,444,375,264,186,90,264,267,264,267,264,264,131,133,152,97,168,164,1136,	0,9526,11475,12305,15892,17547,26132,29559,30474,49081,50703,55542,59097,60174,60737,67987,68963,76529,79073,
#Partially deleted in new
chr1	175077388	175147391	chr1:175077388-175147391	1	+	175077418	175147071	789624	17	439,375,264,186,90,264,77,190,264,264,131,133,152,97,168,164,461,	0,1944,2774,6361,8016,16601,20028,39627,41172,46011,49566,50643,51206,58456,59432,66998,69542,
#Partially deleted in new
chr1	175077418	175147936	chr1:175077418-175147936	1	+	175077418	175147071	789624	16	409,375,264,186,90,264,267,264,264,131,133,152,97,168,164,1006,	0,1914,2744,6331,7986,16571,39520,41142,45981,49536,50613,51176,58426,59402,66968,69512,
#Partially deleted in new
chr1	175156986	175192793	chr1:175156986-175192793	1	-	175160713	175161013	789624	4	4160,176,74,154,	0,9575,20624,35653,
#Partially deleted in new
chr1	175156986	175192943	chr1:175156986-175192943	3	-	175160713	175161013	789624	4	4160,176,74,84,	0,9575,20624,35873,
#Deleted in new
chr1	175156986	175166741	chr1:175156986-175166741	1	-	175160168	175160630	789624	2	4160,180,	0,9575,
#Partially deleted in new
chr1	175158952	175192754	chr1:175158952-175192754	1	-	175160713	175161013	789624	3	2194,176,115,	0,7609,33687,
#Partially deleted in new
chr1	175161026	175192775	chr1:175161026-175192775	0	-	175161026	175161026	8553170	5	120,176,75,74,136,	0,5535,15373,16584,31613,
#Partially deleted in new
chr1	175161043	175192999	chr1:175161043-175192999	0	-	175161043	175161043	8553170	5	103,176,74,77,140,	0,5518,16567,31596,31816,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	175203227	175204849	chr1:175203227-175204849	3	-	175203227	175203227	8553170	2	681,94,	0,1528,
#Partially deleted in new
chr1	175297079	175297240	chr1:175297079-175297240	7	+	175297079	175297079	16724991	1	161,	0,
#Partially deleted in new
chr1	175307217	175335459	chr1:175307217-175335459	3	+	175307217	175307217	8553170	5	195,140,209,132,171,	0,13764,23159,26104,28071,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr1	175315193	175743770	chr1:175315193-175743770	3	-	175323356	175406714	789624	23	8283,164,162,97,152,133,131,144,120,147,120,270,264,90,186,270,151,116,264,477,562,101,545,	0,9162,14880,20517,22334,39197,40309,41125,44418,47469,48514,49816,50681,52014,64358,70838,76094,78586,81350,87946,91022,213075,428032,
#Partially deleted in new
chr1	175322798	175743616	chr1:175322798-175743616	1	-	175323356	175406714	789624	24	678,164,162,97,152,133,131,144,120,147,120,270,264,90,186,270,151,116,264,477,562,101,11,380,	0,1557,7275,12912,14729,31592,32704,33520,36813,39864,40909,42211,43076,44409,56753,63233,68489,70981,73745,80341,83417,205470,333806,420438,
#Partially deleted in new
chr1	175391427	175406364	chr1:175391427-175406364	0	-	175391427	175406364	789624	4	11,116,264,149,	0,2352,5116,14788,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	175538774	175556818	chr1:175538774-175556818	3	-	175538774	175538774	8553170	2	402,228,	0,17816,
#Partially deleted in new
chr1	175877342	175880468	chr1:175877342-175880468	3	+	175877342	175877342	789624	3	252,1287,270,	0,1472,2856,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	175904761	175920513	chr1:175904761-175920513	3	-	175904761	175904761	8553170	3	375,224,58,	0,3785,15694,
#Partially deleted in new
chr1	175921974	175922145	chr1:175921974-175922145	7	+	175921974	175921974	16724991	1	171,	0,
#Partially deleted in new
chr1	175944830	176206691	chr1:175944830-176206691	0	-	176149012	176206691	789624	18	340,45,161,125,118,117,82,109,144,136,115,58,77,60,69,98,60,120,	0,2364,42112,43457,44531,82741,98355,98879,101350,136321,140945,171793,190179,191657,204175,231079,239802,261741,
#Partially deleted in new
chr1	175944830	176207493	chr1:175944830-176207493	3	-	175945152	176206978	0	20	340,45,161,125,118,117,82,109,144,136,115,58,77,60,69,120,77,98,60,922,	0,2364,42112,43457,44531,82741,98355,98879,101350,136321,140945,171793,190179,191657,204175,218038,218984,231079,239802,261741,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	175944830	176081256	chr1:175944830-176081256	0	-	175944830	175944830	8553170	9	340,45,161,1192,117,18,9,144,105,	0,2364,42112,43457,82741,98355,98979,101350,136321,
#Partially deleted in new
chr1	175944831	176184664	chr1:175944831-176184664	0	-	175945152	176184664	789624	18	339,45,161,125,118,117,82,109,144,136,115,58,77,69,120,77,98,32,	0,2363,42111,43456,44530,82740,98354,98878,101349,136320,140944,171792,190178,204174,218037,218983,231078,239801,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr1	175944847	176206728	chr1:175944847-176206728	0	-	176201344	176206728	8553170	21	323,45,161,125,118,117,82,109,144,136,115,58,77,60,69,120,77,98,60,85,157,	0,2347,42095,43440,44514,82724,98338,98862,101333,136304,140928,171776,190162,191640,204158,218021,218967,231062,239785,256413,261724,
#Deleted in new
chr1	175944852	175947326	chr1:175944852-175947326	0	-	175944852	175944852	8553170	2	318,132,	0,2342,
#Partially deleted in new
chr1	175945152	176206978	chr1:175945152-176206978	1	-	175945152	176206978	0	19	18,45,161,125,118,117,82,109,144,136,115,58,77,69,120,65,98,60,407,	0,2042,41790,43135,44209,82419,98033,98557,101028,135999,140623,171471,189857,203853,217716,218674,230757,239480,261419,
#Deleted in new
chr1	175968397	175968540	chr1:175968397-175968540	3	-	175968397	175968397	789624	1	143,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	176017276	176018760	chr1:176017276-176018760	3	+	176017276	176017276	8553170	2	293,336,	0,1148,
#Partially deleted in new
chr1	176043215	176135082	chr1:176043215-176135082	0	-	176043215	176135082	789624	8	52,109,144,136,115,58,54,73,	0,494,2965,37936,42560,73408,90631,91794,
#Partially deleted in new
chr1	176085865	176206381	chr1:176085865-176206381	0	-	176085865	176184676	789624	9	25,58,77,69,120,77,98,60,33,	0,30758,49144,63140,77003,77949,90044,98767,120483,
#Partially deleted in new
chr1	176116645	176206440	chr1:176116645-176206440	0	-	176168683	176184676	789624	10	36,77,60,69,120,77,84,98,60,92,	0,18364,19842,32360,46223,47169,52019,59264,67987,89703,
#Partially deleted in new
chr1	176135009	176207083	chr1:176135009-176207083	0	-	176163884	176206978	0	7	77,60,69,120,77,60,512,	0,1478,13996,27859,28805,49623,71562,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	176217540	176217602	chr1:176217540-176217602	3	+	176217540	176217540	8553170	1	62,	0,
#Deleted in new
chr1	176231199	176231830	chr1:176231199-176231830	7	-	176231199	176231199	16724991	1	631,	0,
#Deleted in new
chr1	176243861	176244029	chr1:176243861-176244029	3	-	176243861	176243861	8553170	1	168,	0,
#Deleted in new
chr1	176272482	176273402	chr1:176272482-176273402	7	+	176272482	176272482	16724991	3	57,426,312,	0,124,608,
#Deleted in new
chr1	176305671	176306095	chr1:176305671-176306095	7	-	176305671	176305671	16724991	1	424,	0,
#Deleted in new
chr1	176367698	176368401	chr1:176367698-176368401	7	-	176367698	176367698	16724991	1	703,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	176463170	176691204	chr1:176463170-176691204	1	+	176556322	176690483	789624	5	248,1835,1072,146,1068,	0,92236,131353,207799,226966,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr1	176463170	176845605	chr1:176463170-176845605	3	+	176556322	176842454	789624	23	248,1835,1072,146,294,193,122,490,129,92,194,147,136,217,172,178,214,169,136,110,72,99,3226,	0,92236,131353,207799,226966,228955,232567,235929,239436,243188,246812,248664,276455,276809,302495,306436,307796,326638,328176,330389,336890,377002,379209,
#Partially deleted in new
chr1	176537302	176555711	chr1:176537302-176555711	0	+	176537302	176537302	8553170	2	47,305,	0,18104,
#Deleted in new
chr1	176553487	176555736	chr1:176553487-176555736	0	+	176553487	176553487	8553170	2	250,330,	0,1919,
#Deleted in new
chr1	176616272	176616786	chr1:176616272-176616786	7	-	176616272	176616272	16724991	1	514,	0,
#Partially deleted in new
chr1	176791444	176836802	chr1:176791444-176836802	0	+	176791444	176791444	8553170	4	38,110,72,168,	0,2115,8616,45190,
#Partially deleted in new
chr1	176857301	177164867	chr1:176857301-177164867	1	-	176857610	177164676	789624	23	349,184,101,136,152,134,269,189,105,128,195,167,151,138,75,85,168,150,108,147,394,188,474,	0,11542,19235,25557,27037,30769,37260,76850,78964,86589,88624,91883,100376,101043,107861,157489,166102,167281,172332,173504,175154,203776,307092,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr1	176861066	177164690	chr1:176861066-177164690	3	-	176864283	177164676	789624	23	3455,184,101,136,152,134,269,189,105,128,195,167,151,138,75,85,168,150,108,147,394,188,297,	0,7777,15470,21792,23272,27004,33495,73085,75199,82824,84859,88118,96611,97278,104096,153724,162337,163516,168567,169739,171389,200011,303327,
#Partially deleted in new
chr1	176868812	177164683	chr1:176868812-177164683	1	-	176868839	177164676	789624	22	215,101,136,152,134,269,189,105,128,195,167,151,138,75,85,168,150,108,147,394,188,290,	0,7724,14046,15526,19258,25749,65339,67453,75078,77113,80372,88865,89532,96350,145978,154591,155770,160821,161993,163643,192265,295581,
#Partially deleted in new
chr1	176936053	177164973	chr1:176936053-177164973	0	-	176936053	176936053	8553170	15	317,128,195,167,151,138,75,85,168,150,108,147,394,188,580,	0,7837,9872,13131,21624,22291,29109,78737,87350,88529,93580,94752,96402,125024,228340,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	176976052	177032550	chr1:176976052-177032550	0	-	176976052	176976052	8553170	8	851,359,85,82,150,108,147,95,	0,5362,38738,47351,48530,53581,54753,56403,
#Deleted in new
chr1	177029362	177029445	chr1:177029362-177029445	3	-	177029362	177029362	5263520	1	83,	0,
#Partially deleted in new
chr1	177171496	177282422	chr1:177171496-177282422	3	+	177229876	177281528	789624	8	236,345,191,209,106,237,223,2011,	0,58304,84422,85679,101991,104701,107066,108915,
#Deleted in new
chr1	177256780	177257295	chr1:177256780-177257295	0	+	177256780	177256780	8553170	2	253,120,	0,395,
#Partially deleted in new
chr1	177256859	177281814	chr1:177256859-177281814	0	+	177256859	177256859	8553170	5	525,106,237,223,1403,	0,16628,19338,21703,23552,
#Partially deleted in new
chr1	177351585	177366272	chr1:177351585-177366272	3	+	177351585	177351585	789624	4	65,219,103,104,	0,5261,11853,14583,
#Partially deleted in new
chr1	177393286	177576949	chr1:177393286-177576949	1	-	177393286	177393286	8553170	3	502,57,239,	0,180441,183424,
#Partially deleted in new
chr1	177393678	177597709	chr1:177393678-177597709	3	-	177393678	177393678	8553170	4	110,57,240,139,	0,180049,183032,203892,
#Partially deleted in new
chr1	177700523	177710330	chr1:177700523-177710330	3	+	177700523	177700523	789624	4	839,116,169,542,	0,935,8433,9265,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	177923955	177928485	chr1:177923955-177928485	0	-	177923955	177923955	8553170	3	193,91,527,	0,277,4003,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	177927565	177936366	chr1:177927565-177936366	0	-	177927565	177927565	8553170	8	458,1576,99,80,109,99,153,69,	0,788,2979,4924,5132,5648,5918,8732,
#Partially deleted in new
chr1	177928787	178022544	chr1:177928787-178022544	3	-	177928787	177928787	8553170	31	1142,99,80,109,99,153,68,300,76,105,141,106,112,118,82,98,231,136,62,152,145,109,121,113,357,72,117,213,107,70,105,	0,1757,3702,3910,4426,4696,7510,8426,10914,11822,13112,15773,17632,19037,23126,25491,29344,30052,31554,32003,32802,35383,36259,37105,38895,42608,44405,55418,56168,57072,93652,
#Partially deleted in new
chr1	177928790	178038007	chr1:177928790-178038007	0	-	177928790	177928790	8553170	27	1139,99,80,109,99,153,68,300,76,105,141,106,112,118,82,98,231,136,1393,109,121,113,357,229,97,108,111,	0,1754,3699,3907,4423,4693,7507,8423,10911,11819,13109,15770,17629,19034,23123,25488,29341,30049,31551,35380,36256,37102,38892,93649,105914,108903,109106,
#Partially deleted in new
chr1	177928790	178022587	chr1:177928790-178022587	0	-	177928790	177928790	8553170	24	1139,99,80,112,99,153,68,300,76,105,141,106,112,118,82,98,231,2100,145,109,121,113,357,148,	0,1754,3699,3907,4423,4693,7507,8423,10911,11819,13109,15770,17629,19034,23123,25488,29341,30049,32799,35380,36256,37102,38892,93649,
#Partially deleted in new
chr1	177929145	177969915	chr1:177929145-177969915	3	-	177929857	177967981	789624	26	784,99,80,109,99,153,68,300,76,105,141,106,112,118,82,98,231,136,62,149,145,109,121,113,357,32,	0,1399,3344,3552,4068,4338,7152,8068,10556,11464,12754,15415,17274,18679,22768,25133,28986,29694,31196,31645,32444,35025,35901,36747,38537,40738,
#Partially deleted in new
chr1	177929834	177948644	chr1:177929834-177948644	0	-	177929834	177929834	8553170	14	95,99,80,99,153,68,300,76,105,141,106,112,118,255,	0,710,2655,3379,3649,6463,7379,9867,10775,12065,14726,16585,17990,18555,
#Partially deleted in new
chr1	177929857	177984303	chr1:177929857-177984303	0	-	177958960	177967981	789624	25	72,99,80,109,99,153,68,300,76,105,141,106,112,118,82,98,231,136,149,145,109,121,113,357,98,	0,687,2632,2840,3356,3626,6440,7356,9844,10752,12042,14703,16562,17967,22056,24421,28274,28982,30933,31732,34313,35189,36035,37825,54348,
#Partially deleted in new
chr1	177944558	177958419	chr1:177944558-177958419	0	-	177944558	177944558	8553170	6	108,112,118,82,98,288,	0,1861,3266,7355,9720,13573,
#Partially deleted in new
chr1	177945331	177970213	chr1:177945331-177970213	1	-	177946319	177967981	789624	14	1200,118,82,98,231,136,62,152,145,109,121,113,357,24,	0,2493,6582,8947,12800,13508,15010,15459,16258,18839,19715,20561,22351,24858,
#Partially deleted in new
chr1	177946419	177958903	chr1:177946419-177958903	0	-	177946419	177958903	789624	4	112,118,231,64,	0,1405,11712,12420,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	178006135	178037950	chr1:178006135-178037950	7	-	178006135	178006135	16724991	10	2014,229,83,101,110,66,59,97,108,54,	0,16304,18268,20019,25415,26294,26891,28569,31558,31761,
#Partially deleted in new
chr1	178007965	178037947	chr1:178007965-178037947	4	-	178007965	178007965	16724991	6	184,229,101,97,108,51,	0,14474,18189,26739,29728,29931,
#Partially deleted in new
chr1	178008080	178037946	chr1:178008080-178037946	5	-	178008080	178008080	16724991	10	69,229,184,75,110,66,59,97,108,50,	0,14359,17991,22527,23470,24349,24946,26624,29613,29816,
#Deleted in new
chr1	178017126	178017343	chr1:178017126-178017343	7	+	178017126	178017126	16724991	1	217,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	178035273	178037924	chr1:178035273-178037924	4	-	178035273	178035273	16724991	2	2528,28,	0,2623,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	178091507	178093984	chr1:178091507-178093984	3	-	178091507	178091507	5263520	2	1905,424,	0,2053,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	178091508	178093600	chr1:178091508-178093600	0	-	178091508	178091508	8553170	2	1904,67,	0,2025,
#Deleted in new
chr1	178093149	178093572	chr1:178093149-178093572	0	-	178093149	178093149	8553170	2	261,39,	0,384,
#Partially deleted in new
chr1	178094140	178473422	chr1:178094140-178473422	3	+	178094492	178473239	789624	18	554,128,127,107,110,154,99,555,145,145,237,202,179,862,135,203,88,348,	0,189423,205851,295959,326370,345281,347408,348534,351377,357430,358275,360306,362580,363542,370137,371779,373193,378934,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	178120960	178300055	chr1:178120960-178300055	0	+	178120960	178120960	8553170	6	127,127,97,175,128,64,	0,2095,2758,4366,162603,179031,
#Deleted in new
chr1	178194341	178194709	chr1:178194341-178194709	7	-	178194341	178194341	16724991	2	201,110,	0,258,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	178341470	178484147	chr1:178341470-178484147	1	+	178341595	178473239	789624	16	138,107,110,154,99,555,145,145,237,202,200,862,135,203,88,11073,	0,48629,79040,97951,100078,101204,104047,110100,110945,112976,115229,116212,122807,124449,125863,131604,
#Deleted in new
chr1	178411615	178411972	chr1:178411615-178411972	7	+	178411615	178411615	16724991	1	357,	0,
#Partially deleted in new
chr1	178452436	178473522	chr1:178452436-178473522	0	+	178452436	178473217	789624	9	216,202,200,862,135,203,88,31,448,	0,2010,4263,5246,11841,13483,14897,18256,20638,
#Deleted in new
chr1	178456474	178457907	chr1:178456474-178457907	0	+	178456474	178456474	8553170	2	425,225,	0,1208,
#Partially deleted in new
chr1	178479246	178496939	chr1:178479246-178496939	3	-	178479534	178496939	789624	8	369,86,108,99,366,66,357,40,	0,3065,3928,9254,10825,13254,15207,17653,
#Partially deleted in new
chr1	178479246	178486921	chr1:178479246-178486921	1	-	178479534	178486827	789624	4	369,86,108,488,	0,3065,3928,7187,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	178484407	178484682	chr1:178484407-178484682	3	+	178484407	178484407	8553170	1	275,	0,
#Deleted in new
chr1	178511562	178513051	chr1:178511562-178513051	3	-	178511562	178511562	8553170	2	720,410,	0,1079,
#Partially deleted in new
chr1	178513076	178522649	chr1:178513076-178522649	3	+	178513188	178522440	789624	9	151,51,69,57,60,65,202,43,325,	0,950,1623,2782,3538,7295,7596,8145,9248,
#Partially deleted in new
chr1	178513111	178521810	chr1:178513111-178521810	1	+	178513188	178521724	789624	9	116,51,69,57,60,65,202,43,139,	0,915,1588,2747,3503,7260,7561,8110,8560,
#Partially deleted in new
chr1	178513117	178522648	chr1:178513117-178522648	1	+	178513188	178520567	789624	4	110,159,51,2132,	0,909,1582,7399,
#Partially deleted in new
chr1	178513129	178522649	chr1:178513129-178522649	1	+	178513188	178520937	789624	7	98,51,69,57,60,65,1977,	0,897,1570,2729,3485,7242,7543,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	178513132	178548602	chr1:178513132-178548602	0	+	178513188	178516643	789624	16	95,51,69,57,82,65,202,43,98,57,248,115,161,92,70,327,	0,894,1567,2726,3460,7239,7540,8089,12238,16988,18399,19824,20592,28754,33961,35143,
#Deleted in new
chr1	178520828	178521812	chr1:178520828-178521812	0	+	178520828	178521621	789624	3	46,43,255,	0,393,729,
#Partially deleted in new
chr1	178542751	178545500	chr1:178542751-178545500	0	+	178542751	178542751	8553170	3	134,154,288,	0,2123,2461,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	178542795	178548889	chr1:178542795-178548889	3	+	178542795	178542795	789624	3	90,691,1796,	0,2417,4298,
#Deleted in new
chr1	178560912	178561029	chr1:178560912-178561029	7	+	178560912	178560912	16724991	1	117,	0,
#Partially deleted in new
chr1	178651705	178652282	chr1:178651705-178652282	3	+	178651705	178651705	8553170	1	577,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	178677748	178677834	chr1:178677748-178677834	3	+	178677748	178677748	5263520	1	86,	0,
#Deleted in new
chr1	178724305	178726285	chr1:178724305-178726285	3	-	178724305	178724305	8553170	1	1980,	0,
#Partially deleted in new
chr1	178725146	178921841	chr1:178725146-178921841	1	+	178776764	178916359	789624	19	273,140,105,51,84,90,93,127,138,91,68,136,152,55,106,93,106,92,5512,	0,51535,59271,60410,82898,86168,96465,108277,152351,153755,158319,159929,160822,164495,168772,172517,176959,181629,191183,
#Partially deleted in new
chr1	178725164	178920103	chr1:178725164-178920103	3	+	178776764	178916359	789624	20	255,140,105,51,84,90,93,127,138,91,68,136,152,55,78,106,93,106,92,3774,	0,51517,59253,60392,82880,86150,96447,108259,152333,153737,158301,159911,160804,164477,167065,168754,172499,176941,181611,191165,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	178725164	178879788	chr1:178725164-178879788	0	+	178725164	178725164	8553170	10	255,140,105,51,84,90,93,127,138,887,	0,51517,59253,60392,82880,86150,96447,108259,152333,153737,
#Partially deleted in new
chr1	178725395	178883533	chr1:178725395-178883533	0	+	178776764	178883533	789624	10	24,140,51,84,90,93,127,138,91,68,	0,51286,60161,82649,85919,96216,108028,152102,153506,158070,
#Partially deleted in new
chr1	178746682	178747754	chr1:178746682-178747754	7	-	178746682	178746682	16724991	1	1072,	0,
#Deleted in new
chr1	178753653	178753772	chr1:178753653-178753772	3	-	178753653	178753653	8553170	1	119,	0,
#Partially deleted in new
chr1	178849704	178871052	chr1:178849704-178871052	3	-	178851128	178865776	789624	6	1612,271,194,849,110,312,	0,2978,3889,15249,19409,21036,
#Partially deleted in new
chr1	178850623	178871022	chr1:178850623-178871022	1	-	178851128	178865776	789624	5	693,271,194,849,282,	0,2059,2970,14330,20117,
#Deleted in new
chr1	178865433	178869278	chr1:178865433-178869278	0	-	178865433	178865776	789624	2	369,165,	0,3680,
#Partially deleted in new
chr1	178877539	178893991	chr1:178877539-178893991	0	+	178877539	178877539	8553170	7	96,91,68,136,152,55,73,	0,1362,5926,7536,8429,12102,16379,
#Partially deleted in new
chr1	178878944	178885621	chr1:178878944-178885621	0	+	178878944	178885257	789624	3	48,68,546,	0,4521,6131,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	178885976	178894325	chr1:178885976-178894325	0	+	178885976	178885976	8553170	4	144,55,78,407,	0,3665,6253,7942,
#Partially deleted in new
chr1	178886078	178906811	chr1:178886078-178906811	0	+	178886078	178906811	789624	6	42,55,106,93,106,36,	0,3563,7840,11585,16027,20697,
#Partially deleted in new
chr1	178893837	178916375	chr1:178893837-178916375	0	+	178893837	178893837	8553170	5	187,93,106,92,46,	0,3826,8268,12938,22492,
#Partially deleted in new
chr1	179025803	179050316	chr1:179025803-179050316	0	+	179043847	179050316	789624	3	55,510,38,	0,17911,24475,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	179025895	179076562	chr1:179025895-179076562	3	+	179043847	179072144	789624	8	203,510,87,110,172,192,60,4650,	0,17819,24383,28633,38031,38409,40904,46017,
#Deleted in new
chr1	179035308	179035652	chr1:179035308-179035652	7	-	179035308	179035308	16724991	1	344,	0,
#Partially deleted in new
chr1	179081376	179095996	chr1:179081376-179095996	3	+	179082128	179095218	789624	6	1011,114,266,179,125,1029,	0,1563,4251,6534,12716,13591,
#Partially deleted in new
chr1	179082069	179085855	chr1:179082069-179085855	0	+	179082128	179085855	789624	3	318,114,87,	0,870,3699,
#Partially deleted in new
chr1	179082077	179088083	chr1:179082077-179088083	0	+	179082128	179082753	789624	4	310,335,266,173,	0,641,3550,5833,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	179082085	179098023	chr1:179082085-179098023	1	+	179082128	179097895	789624	6	302,114,266,179,125,196,	0,854,3542,5825,12007,15742,
#Partially deleted in new
chr1	179082180	179094135	chr1:179082180-179094135	0	+	179082180	179082180	8553170	5	207,114,179,113,43,	0,759,5730,9484,11912,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	179085371	179094121	chr1:179085371-179094121	0	+	179085578	179094121	789624	3	522,179,29,	0,2539,8721,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	179085797	179088496	chr1:179085797-179088496	0	+	179085797	179085797	8553170	2	96,586,	0,2113,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	179099326	179229601	chr1:179099326-179229601	3	-	179107717	179229397	0	12	10115,174,90,153,185,178,85,273,296,171,63,361,	0,10955,12982,15551,18005,19260,20863,22268,27050,31984,33985,129914,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	179104047	179143089	chr1:179104047-179143089	1	-	179107717	179143044	0	13	4851,234,174,90,153,185,178,85,273,296,171,63,157,	0,5160,6234,8261,10830,13284,14539,16142,17547,22329,27263,29264,38885,
#Partially deleted in new
chr1	179107598	179143056	chr1:179107598-179143056	1	-	179107717	179143044	0	12	1843,174,90,153,185,178,85,273,296,171,63,124,	0,2683,4710,7279,9733,10988,12591,13996,18778,23712,25713,35334,
#Partially deleted in new
chr1	179107717	179229397	chr1:179107717-179229397	1	-	179107717	179229397	0	11	1724,174,90,153,185,178,85,273,296,171,157,	0,2564,4591,7160,9614,10869,12472,13877,18659,23593,121523,
#Partially deleted in new
chr1	179107717	179143044	chr1:179107717-179143044	1	-	179107717	179143044	0	12	1181,234,174,90,153,185,178,85,273,296,171,112,	0,1490,2564,4591,7160,9614,10869,12472,13877,18659,23593,35215,
#Partially deleted in new
chr1	179107717	179229397	chr1:179107717-179229397	1	-	179107717	179229397	0	12	1181,234,174,90,153,185,178,85,273,296,171,157,	0,1490,2564,4591,7160,9614,10869,12472,13877,18659,23593,121523,
#Partially deleted in new
chr1	179107717	179229397	chr1:179107717-179229397	1	-	179107717	179229397	0	13	1181,234,174,90,153,185,178,85,273,296,171,63,157,	0,1490,2564,4591,7160,9614,10869,12472,13877,18659,23593,25594,121523,
#Partially deleted in new
chr1	179110580	179229684	chr1:179110580-179229684	1	-	179110804	179229397	0	10	265,90,153,185,178,85,273,296,171,444,	0,1728,4297,6751,8006,9609,11014,15796,20730,118660,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	179116822	179143069	chr1:179116822-179143069	0	-	179116822	179116822	8553170	7	694,178,85,273,296,171,137,	0,1764,3367,4772,9554,14488,26110,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	179116851	179143076	chr1:179116851-179143076	0	-	179116851	179116851	8553170	8	665,178,85,273,296,171,63,144,	0,1735,3338,4743,9525,14459,16460,26081,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	179131211	179143074	chr1:179131211-179143074	0	-	179131211	179131211	8553170	2	270,142,	0,11721,
#Deleted in new
chr1	179137763	179137934	chr1:179137763-179137934	7	+	179137763	179137763	16724991	1	171,	0,
#Deleted in new
chr1	179183733	179184547	chr1:179183733-179184547	7	+	179183733	179183733	16724991	1	814,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	179196472	179196579	chr1:179196472-179196579	3	+	179196472	179196472	8553170	1	107,	0,
#Deleted in new
chr1	179201486	179201627	chr1:179201486-179201627	3	+	179201486	179201486	8553170	1	141,	0,
#Deleted in new
chr1	179201704	179201926	chr1:179201704-179201926	7	+	179201704	179201704	16724991	1	222,	0,
#Partially deleted in new
chr1	179220937	179222125	chr1:179220937-179222125	7	+	179220937	179220937	16724991	2	208,513,	0,675,
#Deleted in new
chr1	179255732	179256081	chr1:179255732-179256081	7	+	179255732	179255732	16724991	1	349,	0,
#Deleted in new
chr1	179271115	179271266	chr1:179271115-179271266	7	-	179271115	179271115	16724991	1	151,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	179293713	179358677	chr1:179293713-179358677	1	+	179335523	179353641	789624	15	223,59,152,60,108,283,79,82,46,130,98,99,136,146,5093,	0,29723,41792,44123,45724,47314,48400,49148,49876,51233,53886,55130,56582,57603,59871,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	179293713	179358677	chr1:179293713-179358677	1	+	179302799	179353641	789624	15	223,126,152,60,108,283,79,82,46,130,98,99,136,146,5093,	0,8963,41792,44123,45724,47314,48400,49148,49876,51233,53886,55130,56582,57603,59871,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	179293801	179358680	chr1:179293801-179358680	3	+	179302684	179353641	789624	16	135,126,59,152,60,108,283,79,82,46,130,98,99,136,146,5096,	0,8875,29635,41704,44035,45636,47226,48312,49060,49788,51145,53798,55042,56494,57515,59783,
#Partially deleted in new
chr1	179294319	179341310	chr1:179294319-179341310	0	+	179302684	179341310	789624	7	82,126,59,152,60,108,283,	0,8357,29117,41186,43517,45118,46708,
#Partially deleted in new
chr1	179365719	179554735	chr1:179365719-179554735	3	+	179366509	179554519	789624	26	281,203,173,104,121,86,57,103,122,141,105,121,102,155,76,235,199,94,200,97,108,114,105,83,233,224,	0,684,3080,4255,12917,13677,16980,17722,19518,28183,29378,45426,63798,64732,66547,79250,102723,117408,125818,127135,143576,159614,162607,168075,169010,188792,
#Partially deleted in new
chr1	179365719	179379482	chr1:179365719-179379482	0	+	179368828	179379482	789624	5	281,173,104,121,86,	0,3080,4255,12917,13677,
#Partially deleted in new
chr1	179365719	179554733	chr1:179365719-179554733	1	+	179366509	179468469	789624	25	281,203,173,104,121,86,57,103,122,141,105,121,102,155,76,199,94,200,97,108,114,105,83,233,222,	0,684,3080,4255,12917,13677,16980,17722,19518,28183,29378,45426,63798,64732,66547,102723,117408,125818,127135,143576,159614,162607,168075,169010,188792,
#Partially deleted in new
chr1	179365725	179370079	chr1:179365725-179370079	0	+	179365725	179365725	8553170	3	256,173,105,	0,3074,4249,
#Partially deleted in new
chr1	179365737	179368938	chr1:179365737-179368938	0	+	179366509	179368938	789624	3	244,203,139,	0,666,3062,
#Partially deleted in new
chr1	179365971	179370079	chr1:179365971-179370079	0	+	179365971	179365971	8553170	4	29,203,173,105,	0,432,2828,4003,
#Partially deleted in new
chr1	179365971	179385302	chr1:179365971-179385302	0	+	179365971	179365971	8553170	7	40,104,121,86,57,103,65,	0,4003,12665,13425,16728,17470,19266,
#Partially deleted in new
chr1	179365971	179554735	chr1:179365971-179554735	0	+	179366509	179468469	789624	26	155,203,173,104,121,86,57,103,122,141,105,121,102,155,76,199,94,200,97,94,108,114,105,83,233,224,	0,432,2828,4003,12665,13425,16728,17470,19266,27931,29126,45174,63546,64480,66295,102471,117156,125566,126883,140861,143324,159362,162355,167823,168758,188540,
#Partially deleted in new
chr1	179365971	179378757	chr1:179365971-179378757	0	+	179368828	179378757	789624	4	155,173,104,121,	0,2828,4003,12665,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	179365976	179468717	chr1:179365976-179468717	0	+	179365976	179365976	8553170	16	24,104,121,86,57,103,122,141,105,121,102,155,76,235,143,275,	0,3998,12660,13420,16723,17465,19261,27926,29121,45169,63541,64475,66290,78993,83094,102466,
#Partially deleted in new
chr1	179368900	179554735	chr1:179368900-179554735	0	+	179368900	179554519	789624	22	72,104,121,86,57,103,122,141,105,121,102,155,76,235,199,94,200,97,105,83,233,224,	0,1074,9736,10496,13799,14541,16337,25002,26197,42245,60617,61551,63366,76069,99542,114227,122637,123954,159426,164894,165829,185611,
#Partially deleted in new
chr1	179447577	179448440	chr1:179447577-179448440	7	-	179447577	179447577	16724991	1	863,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	179447601	179457315	chr1:179447601-179457315	7	-	179447601	179447601	16724991	1	9714,	0,
#Partially deleted in new
chr1	179491702	179554735	chr1:179491702-179554735	0	+	179491702	179491702	8553170	9	35,97,108,114,105,135,83,233,224,	0,1152,17593,33631,36624,41267,42092,43027,62809,
#Partially deleted in new
chr1	179534492	179554713	chr1:179534492-179554713	0	+	179534492	179534492	8553170	2	470,202,	0,20019,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	179543200	179548922	chr1:179543200-179548922	3	-	179543200	179543200	8553170	2	3053,241,	0,5481,
#Partially deleted in new
chr1	179550538	179575933	chr1:179550538-179575933	3	-	179551172	179575864	789624	8	913,79,56,204,83,73,104,343,	0,2064,3937,6488,9140,10750,14151,25052,
#Partially deleted in new
chr1	179550538	179575952	chr1:179550538-179575952	1	-	179551172	179575864	789624	7	913,79,56,83,73,104,362,	0,2064,3937,9140,10750,14151,25052,
#Partially deleted in new
chr1	179551066	179554733	chr1:179551066-179554733	0	+	179551066	179551066	8553170	2	1635,222,	0,3445,
#Deleted in new
chr1	179576267	179576349	chr1:179576267-179576349	3	+	179576267	179576267	8553170	1	82,	0,
#Deleted in new
chr1	179586704	179589175	chr1:179586704-179589175	7	+	179586704	179586704	16724991	1	2471,	0,
#Deleted in new
chr1	179590371	179591305	chr1:179590371-179591305	3	+	179590371	179590371	8553170	1	934,	0,
#Partially deleted in new
chr1	179591612	179691270	chr1:179591612-179691270	3	+	179592615	179690943	0	17	53,538,408,191,84,57,154,173,221,213,67,201,159,183,144,211,575,	0,697,1847,4015,26986,29422,39154,42844,44054,48226,48766,59254,60426,70491,71735,77581,99083,
#Partially deleted in new
chr1	179591621	179691263	chr1:179591621-179691263	1	+	179592615	179690943	0	18	504,246,408,191,84,57,154,173,221,213,67,201,159,162,183,144,211,568,	0,980,1838,4006,26977,29413,39145,42835,44045,48217,48757,59245,60417,62579,70482,71726,77572,99074,
#Partially deleted in new
chr1	179591889	179691272	chr1:179591889-179691272	1	+	179592615	179690943	0	17	236,246,408,191,84,57,154,173,221,213,67,201,159,183,144,211,577,	0,712,1570,3738,26709,29145,38877,42567,43777,47949,48489,58977,60149,70214,71458,77304,98806,
#Partially deleted in new
chr1	179639950	179691272	chr1:179639950-179691272	0	+	179639950	179690943	789624	9	101,67,201,159,162,183,144,211,577,	0,428,10916,12088,14250,22153,23397,29243,50745,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	179730216	179742697	chr1:179730216-179742697	3	+	179730216	179730216	789624	2	201,343,	0,12138,
#Deleted in new
chr1	179742008	179742697	chr1:179742008-179742697	0	+	179742008	179742008	789624	2	85,343,	0,346,
#Partially deleted in new
chr1	179743162	179816198	chr1:179743162-179816198	3	+	179813097	179814189	789624	5	261,91,22,115,2420,	0,64635,68947,69913,70616,
#Deleted in new
chr1	179816183	179818191	chr1:179816183-179818191	3	-	179816183	179816183	8553170	2	344,200,	0,1808,
#Deleted in new
chr1	179816183	179817424	chr1:179816183-179817424	0	-	179816183	179816183	8553170	2	344,57,	0,1184,
#Partially deleted in new
chr1	179829608	179836124	chr1:179829608-179836124	3	-	179829608	179829608	8553170	2	223,130,	0,6386,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	179839966	179877799	chr1:179839966-179877799	3	-	179846070	179852665	0	6	6862,102,519,180,135,107,	0,7568,10878,12665,37272,37726,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	179843930	179877803	chr1:179843930-179877803	1	-	179846070	179852665	0	7	2898,102,519,180,419,135,111,	0,3604,6914,8701,21505,33308,33762,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	179859029	179877799	chr1:179859029-179877799	1	-	179864780	179865176	789624	3	6825,135,107,	0,18209,18663,
#Partially deleted in new
chr1	179865064	179877790	chr1:179865064-179877790	0	-	179865064	179865176	789624	2	790,98,	0,12628,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	179867526	179877782	chr1:179867526-179877782	0	-	179867526	179867526	8553170	2	1670,90,	0,10166,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	179873705	179877772	chr1:179873705-179877772	0	-	179873705	179873705	8553170	3	2472,135,80,	0,3533,3987,
#Deleted in new
chr1	179881606	179882595	chr1:179881606-179882595	3	-	179881606	179881606	8553170	1	989,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	179882041	179919708	chr1:179882041-179919708	1	+	179882502	179918239	0	10	936,78,60,42,87,57,42,69,57,2257,	0,2650,7268,18084,19260,21924,25781,26563,31956,35410,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	179882296	179919277	chr1:179882296-179919277	1	+	179882502	179918239	789624	11	681,78,60,42,87,57,42,69,45,57,1826,	0,2395,7013,17829,19005,21669,25526,26308,31289,31701,35155,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	179882311	179925000	chr1:179882311-179925000	3	+	179882502	179918239	0	10	666,78,57,42,87,57,42,69,57,7549,	0,2380,7001,17814,18990,21654,25511,26293,31686,35140,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	179882695	179920077	chr1:179882695-179920077	1	+	179882865	179918239	789624	10	282,78,57,42,87,57,42,69,57,2626,	0,1996,6617,17430,18606,21270,25127,25909,31302,34756,
#Partially deleted in new
chr1	179882793	179914002	chr1:179882793-179914002	0	+	179882793	179914002	789624	8	184,78,57,87,57,42,69,5,	0,1898,6519,18508,21172,25029,25811,31204,
#Partially deleted in new
chr1	179882888	179914054	chr1:179882888-179914054	0	+	179882888	179914054	789624	9	104,78,57,42,87,57,42,69,57,	0,1803,6424,17237,18413,21077,24934,25716,31109,
#Partially deleted in new
chr1	179882965	179904022	chr1:179882965-179904022	0	+	179882965	179883703	789624	7	101,165,78,57,42,87,57,	0,648,1726,6347,17160,18336,21000,
#Partially deleted in new
chr1	179883936	179901387	chr1:179883936-179901387	0	+	179883936	179883936	8553170	6	92,78,131,57,42,86,	0,755,3892,5376,16189,17365,
#Partially deleted in new
chr1	179883961	179917725	chr1:179883961-179917725	0	+	179883961	179883961	8553170	10	67,78,57,42,87,57,42,69,57,274,	0,730,5351,16164,17340,20004,23861,24643,30036,33490,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	179900261	179900564	chr1:179900261-179900564	3	+	179900261	179900261	8553170	1	303,	0,
#Partially deleted in new
chr1	179903965	179918171	chr1:179903965-179918171	0	+	179903965	179918171	789624	4	57,42,69,720,	0,3857,4639,13486,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	179926640	179941796	chr1:179926640-179941796	3	-	179926640	179926640	8553170	3	27,102,318,	0,154,14838,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	179953183	179954440	chr1:179953183-179954440	3	-	179953183	179953183	8553170	1	1257,	0,
#Partially deleted in new
chr1	179954737	180114880	chr1:179954737-180114880	3	+	179986181	180111161	0	38	405,86,47,115,160,623,114,114,147,659,122,1061,151,164,175,221,164,111,141,137,123,170,197,185,88,147,158,200,212,145,161,140,83,2003,408,147,123,3884,	0,31431,32502,35769,37324,41815,48436,51716,57191,59109,61111,65211,67960,69681,76582,79124,82188,86400,86924,88318,89313,93798,98232,99012,99677,107482,110377,120284,123725,125779,129280,132840,135976,137876,140785,141300,144125,156259,
#Partially deleted in new
chr1	179954772	179996963	chr1:179954772-179996963	0	+	179955103	179996963	789624	5	370,74,44,160,411,	0,31408,32470,37289,41780,
#Deleted in new
chr1	179968685	179969506	chr1:179968685-179969506	7	+	179968685	179968685	16724991	1	821,	0,
#Partially deleted in new
chr1	179986181	179992221	chr1:179986181-179992221	0	+	179986181	179992221	789624	4	73,44,115,160,	0,1061,4325,5880,
#Deleted in new
chr1	180000437	180000808	chr1:180000437-180000808	7	-	180000437	180000437	16724991	1	371,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	180041202	180053834	chr1:180041202-180053834	0	+	180041202	180053834	789624	8	46,141,137,123,170,93,197,85,	0,459,1853,2848,7333,11021,11767,12547,
#Partially deleted in new
chr1	180041661	180048705	chr1:180041661-180048705	0	+	180041661	180044083	789624	3	141,123,170,	0,2389,6874,
#Partially deleted in new
chr1	180073818	180113380	chr1:180073818-180113380	0	+	180073818	180111161	789624	12	90,200,212,145,161,140,83,2003,408,147,123,2384,	0,1203,4644,6698,10199,13759,16895,18795,21704,22219,25044,37178,
#Partially deleted in new
chr1	180080516	180084280	chr1:180080516-180084280	0	+	180080516	180084205	789624	2	145,263,	0,3501,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	180085579	180090748	chr1:180085579-180090748	0	+	180085579	180085579	8553170	3	349,140,35,	0,1998,5134,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	180085603	180111192	chr1:180085603-180111192	0	+	180085603	180085603	8553170	9	325,124,140,83,2003,408,147,123,196,	0,1561,1974,5110,7010,9919,10434,13259,25393,
#Partially deleted in new
chr1	180093713	180113380	chr1:180093713-180113380	0	+	180093713	180111161	789624	6	903,408,147,123,199,944,	0,1809,2324,5149,17283,18723,
#Partially deleted in new
chr1	180095146	180111031	chr1:180095146-180111031	0	+	180095146	180095146	8553170	5	52,408,147,123,35,	0,376,891,3716,15850,
#Partially deleted in new
chr1	180117139	180123890	chr1:180117139-180123890	3	-	180117139	180117139	8553170	3	176,257,73,	0,5829,6678,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	180154833	180204030	chr1:180154833-180204030	3	+	180154907	180197037	0	12	339,101,46,103,91,146,135,130,123,148,180,7769,	0,11657,20487,21097,23960,27340,29082,31219,34718,35599,39379,41428,
#Partially deleted in new
chr1	180154869	180189674	chr1:180154869-180189674	0	+	180154907	180178849	789624	8	303,101,46,91,146,135,130,123,	0,11621,20451,23924,27304,29046,31183,34682,
#Partially deleted in new
chr1	180154896	180198034	chr1:180154896-180198034	1	+	180154907	180197341	0	13	276,101,46,103,91,146,135,130,123,148,180,338,702,	0,11594,20424,21034,23897,27277,29019,31156,34655,35536,39316,41365,42436,
#Deleted in new
chr1	180196681	180198016	chr1:180196681-180198016	0	+	180196681	180197341	789624	2	209,684,	0,651,
#Partially deleted in new
chr1	180230285	180278982	chr1:180230285-180278982	3	+	180230529	180274579	0	6	320,172,203,155,172,4798,	0,17999,36106,41094,41549,43899,
#Partially deleted in new
chr1	180230297	180248697	chr1:180230297-180248697	0	+	180230297	180230297	8553170	2	308,413,	0,17987,
#Partially deleted in new
chr1	180248284	180271894	chr1:180248284-180271894	0	+	180248284	180271445	789624	4	185,203,155,60,	0,18107,23095,23550,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	180269652	180274681	chr1:180269652-180274681	0	-	180269652	180269652	789624	5	2319,80,61,176,31,	0,2960,3685,4284,4998,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	180269652	180502954	chr1:180269652-180502954	3	-	180288362	180502266	0	14	2319,80,61,176,762,81,248,31,90,106,83,97,65,910,	0,2960,3685,4284,4998,11653,18617,45039,127863,143713,160527,222616,225808,232392,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	180269652	180502954	chr1:180269652-180502954	0	-	180326457	180502266	789624	15	2319,80,61,176,762,81,248,31,152,90,106,83,97,65,910,	0,2960,3685,4284,4998,11653,18617,45039,56758,127863,143713,160527,222616,225808,232392,
#Deleted in new
chr1	180272601	180276224	chr1:180272601-180276224	0	-	180272601	180272601	8553170	3	797,176,1574,	0,1335,2049,
#Deleted in new
chr1	180273613	180274713	chr1:180273613-180274713	0	-	180273613	180273613	8553170	2	499,63,	0,1037,
#Partially deleted in new
chr1	180275379	180430262	chr1:180275379-180430262	0	-	180275379	180275379	8553170	7	33,81,248,31,90,106,83,	0,5926,12890,39312,122136,137986,154800,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	180286982	180413388	chr1:180286982-180413388	0	-	180286982	180286982	8553170	6	420,248,31,152,90,23,	0,1287,27709,39428,110533,126383,
#Partially deleted in new
chr1	180288229	180502954	chr1:180288229-180502954	1	-	180288362	180502266	0	8	288,31,90,106,83,97,65,910,	0,26462,109286,125136,141950,204039,207231,213815,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	180434799	180435936	chr1:180434799-180435936	7	+	180434799	180434799	16724991	2	459,376,	0,761,
#Deleted in new
chr1	180438313	180438390	chr1:180438313-180438390	3	-	180438313	180438313	5263520	1	77,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	180519015	180519119	chr1:180519015-180519119	3	-	180519015	180519015	8553170	1	104,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	180552748	180566520	chr1:180552748-180566520	3	+	180552748	180552748	8553170	4	30,83,141,1270,	0,297,9455,12502,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	180632003	180890251	chr1:180632003-180890251	3	+	180632201	180884066	0	15	267,52,102,224,150,84,82,191,180,172,195,167,140,222,6246,	0,50356,155749,171384,174058,174470,179403,192749,193161,202870,204518,231704,241799,248072,252002,
#Partially deleted in new
chr1	180632031	180886126	chr1:180632031-180886126	1	+	180632201	180884066	0	14	239,52,102,224,150,84,82,191,180,172,167,140,222,2121,	0,50328,155721,171356,174030,174442,179375,192721,193133,202842,231676,241771,248044,251974,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	180758721	180758817	chr1:180758721-180758817	3	+	180758721	180758721	8553170	1	96,	0,
#Partially deleted in new
chr1	180836651	180874055	chr1:180836651-180874055	0	+	180836651	180836651	8553170	3	65,167,253,	0,27056,37151,
#Partially deleted in new
chr1	180863763	180878290	chr1:180863763-180878290	0	+	180863763	180863763	8553170	3	111,140,316,	0,10039,14211,
#Deleted in new
chr1	180887571	180888448	chr1:180887571-180888448	0	+	180887571	180887571	8553170	2	340,396,	0,481,
#Partially deleted in new
chr1	180906650	180909166	chr1:180906650-180909166	3	+	180906650	180906650	8553170	4	80,89,80,294,	0,1552,2041,2222,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	180907800	180908942	chr1:180907800-180908942	1	+	180907800	180907800	8553170	4	205,89,80,70,	0,402,891,1072,
#Partially deleted in new
chr1	180913153	180914056	chr1:180913153-180914056	0	+	180913153	180913153	8553170	2	140,223,	0,680,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	180913188	180951614	chr1:180913188-180951614	3	+	180913243	180945588	789624	9	105,947,64,144,1556,157,241,128,6312,	0,2965,4662,15241,21926,25366,27856,31200,32114,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	180928146	180946102	chr1:180928146-180946102	1	+	180928505	180945588	789624	6	427,1556,157,241,128,800,	0,6968,10408,12898,16242,17156,
#Partially deleted in new
chr1	180928454	180945323	chr1:180928454-180945323	0	+	180928454	180945323	789624	5	119,157,241,128,21,	0,10100,12590,15934,16848,
#Partially deleted in new
chr1	180941192	180950925	chr1:180941192-180950925	0	+	180941192	180950533	789624	4	93,128,185,586,	0,3196,4110,9147,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	180944041	180976482	chr1:180944041-180976482	3	-	180944041	180944041	8553170	2	2059,365,	0,32076,
#Partially deleted in new
chr1	180949698	180954887	chr1:180949698-180954887	3	-	180949698	180949698	789624	2	1220,220,	0,4969,
#Deleted in new
chr1	180964510	180965909	chr1:180964510-180965909	7	+	180964510	180964510	16724991	2	266,271,	0,1128,
#Deleted in new
chr1	180970836	180971247	chr1:180970836-180971247	7	+	180970836	180970836	16724991	1	411,	0,
#Partially deleted in new
chr1	180972711	181023121	chr1:180972711-181023121	1	-	180976569	180993422	0	6	3935,95,107,126,63,483,	0,11965,15527,17272,20651,49927,
#Partially deleted in new
chr1	180972724	181022911	chr1:180972724-181022911	3	-	180976569	181022673	0	8	3922,95,107,126,63,95,170,273,	0,11952,15514,17259,20638,29881,32569,49914,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	180973038	180989377	chr1:180973038-180989377	0	-	180973038	180973038	8553170	3	3608,95,1139,	0,11638,15200,
#Deleted in new
chr1	180987724	180988301	chr1:180987724-180988301	0	-	180987724	180987724	8553170	2	371,63,	0,514,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	181033424	181061938	chr1:181033424-181061938	1	+	181034007	181055265	0	5	40,188,261,276,6714,	0,462,15627,16586,21800,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	181033424	181061938	chr1:181033424-181061938	3	+	181034007	181055265	0	7	40,188,261,276,276,105,6714,	0,462,15627,16586,18810,20148,21800,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	181033424	181061938	chr1:181033424-181061938	1	+	181034007	181055265	0	6	40,188,261,276,105,6714,	0,462,15627,16586,20148,21800,
#Partially deleted in new
chr1	181033971	181049697	chr1:181033971-181049697	0	+	181033971	181033971	8553170	2	103,646,	0,15080,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	181034002	181056553	chr1:181034002-181056553	1	+	181034007	181055265	0	5	72,261,276,105,1329,	0,15049,16008,19570,21222,
#Partially deleted in new
chr1	181034002	181055523	chr1:181034002-181055523	1	+	181034007	181055265	0	6	72,261,141,276,105,299,	0,15049,16143,18232,19570,21222,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	181034002	181061938	chr1:181034002-181061938	1	+	181034007	181055265	0	6	72,261,276,276,105,6714,	0,15049,16008,18232,19570,21222,
#Partially deleted in new
chr1	181034009	181055284	chr1:181034009-181055284	0	+	181034009	181034009	8553170	6	65,116,261,276,105,60,	0,2987,15042,16001,19563,21215,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	181034021	181051273	chr1:181034021-181051273	0	+	181034021	181034021	8553170	3	53,261,1263,	0,15030,15989,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	181088711	181092899	chr1:181088711-181092899	3	+	181088902	181089886	789624	1	4188,	0,
#Deleted in new
chr1	181190470	181191149	chr1:181190470-181191149	3	-	181190470	181190470	8553170	2	338,194,	0,485,
#Partially deleted in new
chr1	181236387	181238604	chr1:181236387-181238604	3	+	181236387	181236387	789624	3	118,106,35,	0,1244,2182,
#Partially deleted in new
chr1	181317689	181716129	chr1:181317689-181716129	0	+	181413146	181716129	789624	12	434,448,267,106,140,104,153,182,104,116,54,90,	0,95443,166054,192787,193681,260076,261382,262905,333648,393264,397648,398350,
#Partially deleted in new
chr1	181483310	181652094	chr1:181483310-181652094	0	+	181483310	181483310	8553170	7	700,106,140,104,153,182,757,	0,27166,28060,94455,95761,97284,168027,
#Partially deleted in new
chr1	181483579	181801580	chr1:181483579-181801580	3	+	181483744	181798834	0	47	431,106,140,104,153,182,104,116,54,90,210,113,113,132,73,118,68,98,57,651,314,160,130,60,107,12,97,161,138,202,165,111,84,126,66,92,166,128,97,106,108,101,107,112,181,191,3289,	0,26897,27791,94186,95492,97015,167758,227374,231758,232460,233513,234475,236171,236626,237203,238178,240890,242485,247595,248804,249857,252695,253945,254787,255567,266896,268563,271657,272376,273345,274367,275178,278994,279826,282966,287713,288486,292521,297847,300099,301081,301738,302133,306865,311284,313088,314712,
#Partially deleted in new
chr1	181483579	181808084	chr1:181483579-181808084	1	+	181483744	181798834	0	46	431,106,140,104,153,182,104,116,54,90,210,113,113,132,73,118,68,98,651,314,160,130,60,107,12,97,161,138,202,165,111,84,126,66,92,166,128,97,106,108,101,107,112,181,191,9793,	0,26897,27791,94186,95492,97015,167758,227374,231758,232460,233513,234475,236171,236626,237203,238178,240890,242485,248804,249857,252695,253945,254787,255567,266896,268563,271657,272376,273345,274367,275178,278994,279826,282966,287713,288486,292521,297847,300099,301081,301738,302133,306865,311284,313088,314712,
#Partially deleted in new
chr1	181483737	181798912	chr1:181483737-181798912	1	+	181483744	181798834	789624	47	273,106,140,104,153,182,104,116,54,90,210,113,113,132,73,118,68,98,651,314,160,130,60,107,12,97,161,138,202,165,111,84,126,66,92,166,128,97,106,108,101,107,112,129,181,191,621,	0,26739,27633,94028,95334,96857,167600,227216,231600,232302,233355,234317,236013,236468,237045,238020,240732,242327,248646,249699,252537,253787,254629,255409,266738,268405,271499,272218,273187,274209,275020,278836,279668,282808,287555,288328,292363,297689,299941,300923,301580,301975,306707,309927,311126,312930,314554,
#Partially deleted in new
chr1	181483744	181798959	chr1:181483744-181798959	1	+	181483744	181798834	789624	50	266,106,140,104,153,182,104,116,54,90,210,113,113,132,73,118,68,98,57,208,6,434,314,160,130,60,108,10,98,161,138,202,165,111,84,126,66,92,166,128,97,106,108,101,107,112,129,181,191,668,	0,26732,27626,94021,95327,96850,167593,227209,231593,232295,233348,234310,236006,236461,237038,238013,240725,242320,247430,248639,248848,248856,249692,252530,253780,254622,255402,255515,268397,271492,272211,273180,274202,275013,278829,279661,282801,287548,288321,292356,297682,299934,300916,301573,301968,306700,309920,311119,312923,314547,
#Partially deleted in new
chr1	181483744	181806778	chr1:181483744-181806778	1	+	181483744	181798834	0	46	267,105,140,104,153,182,104,116,54,90,210,113,113,132,73,118,68,98,651,314,160,130,60,107,12,97,161,138,202,165,111,84,126,66,92,166,128,97,106,108,101,107,112,181,191,8487,	0,26733,27626,94021,95327,96850,167593,227209,231593,232295,233348,234310,236006,236461,237038,238013,240725,242320,248639,249692,252530,253780,254622,255402,266731,268398,271492,272211,273180,274202,275013,278829,279661,282801,287548,288321,292356,297682,299934,300916,301573,301968,306700,311119,312923,314547,
#Partially deleted in new
chr1	181483744	181806778	chr1:181483744-181806778	1	+	181483744	181798834	0	47	267,105,140,104,153,182,104,116,54,90,210,113,113,132,73,118,68,98,57,651,314,160,130,60,107,12,97,161,138,202,165,111,84,126,66,92,166,128,97,106,108,101,107,112,181,191,8487,	0,26733,27626,94021,95327,96850,167593,227209,231593,232295,233348,234310,236006,236461,237038,238013,240725,242320,247430,248639,249692,252530,253780,254622,255402,266731,268398,271492,272211,273180,274202,275013,278829,279661,282801,287548,288321,292356,297682,299934,300916,301573,301968,306700,311119,312923,314547,
#Partially deleted in new
chr1	181483744	181798959	chr1:181483744-181798959	1	+	181483744	181798834	0	48	266,106,140,104,153,182,104,116,54,90,210,113,113,132,73,118,68,98,57,651,314,160,130,60,107,12,97,161,138,202,165,111,84,126,66,92,166,128,97,106,108,101,107,112,129,181,191,668,	0,26732,27626,94021,95327,96850,167593,227209,231593,232295,233348,234310,236006,236461,237038,238013,240725,242320,247430,248639,249692,252530,253780,254622,255402,266731,268398,271492,272211,273180,274202,275013,278829,279661,282801,287548,288321,292356,297682,299934,300916,301573,301968,306700,309920,311119,312923,314547,
#Partially deleted in new
chr1	181483744	181806778	chr1:181483744-181806778	1	+	181483744	181798834	0	48	267,105,140,104,153,182,104,116,54,90,210,113,113,132,73,118,68,98,57,651,314,160,130,60,107,12,97,161,138,202,165,111,84,126,66,92,166,128,97,106,108,101,107,112,129,181,191,8487,	0,26733,27626,94021,95327,96850,167593,227209,231593,232295,233348,234310,236006,236461,237038,238013,240725,242320,247430,248639,249692,252530,253780,254622,255402,266731,268398,271492,272211,273180,274202,275013,278829,279661,282801,287548,288321,292356,297682,299934,300916,301573,301968,306700,309920,311119,312923,314547,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	181668748	181669028	chr1:181668748-181669028	3	+	181668748	181668748	8553170	1	280,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	181771565	181771644	chr1:181771565-181771644	7	+	181771565	181771565	16724991	1	79,	0,
#Partially deleted in new
chr1	181776100	181783784	chr1:181776100-181783784	0	+	181776100	181783784	789624	3	128,97,106,	0,3342,7578,
#Deleted in new
chr1	181812704	181813261	chr1:181812704-181813261	3	+	181812704	181812704	8553170	1	557,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	181839472	181839774	chr1:181839472-181839774	3	-	181839472	181839472	8553170	1	302,	0,
#Partially deleted in new
chr1	182054569	182061712	chr1:182054569-182061712	3	-	182056303	182058010	789624	2	3504,145,	0,6998,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	182062676	182069253	chr1:182062676-182069253	3	-	182062676	182062676	8553170	3	2225,54,184,	0,5640,6393,
#Deleted in new
chr1	182086550	182090112	chr1:182086550-182090112	3	+	182086550	182086550	8553170	3	191,206,748,	0,1720,2814,
#Deleted in new
chr1	182127296	182128665	chr1:182127296-182128665	1	-	182127296	182127296	8553170	3	250,117,261,	0,514,1108,
#Deleted in new
chr1	182127296	182128682	chr1:182127296-182128682	3	-	182127296	182127296	8553170	2	631,388,	0,998,
#Deleted in new
chr1	182182729	182183096	chr1:182182729-182183096	7	-	182182729	182182729	16724991	1	367,	0,
#Partially deleted in new
chr1	182190119	182204025	chr1:182190119-182204025	1	-	182190119	182190119	8553170	2	120,141,	0,13765,
#Partially deleted in new
chr1	182203944	182314061	chr1:182203944-182314061	1	-	182203944	182203944	789624	3	161,296,114,	0,109545,110003,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	182327067	182327174	chr1:182327067-182327174	3	+	182327067	182327067	8553170	1	107,	0,
#Deleted in new
chr1	182328496	182329007	chr1:182328496-182329007	7	+	182328496	182328496	16724991	1	511,	0,
#Deleted in new
chr1	182336000	182336334	chr1:182336000-182336334	7	+	182336000	182336000	16724991	1	334,	0,
#Partially deleted in new
chr1	182381703	182392206	chr1:182381703-182392206	3	-	182384404	182388737	0	7	3020,200,128,147,162,179,528,	0,3653,4056,4552,5427,6868,9975,
#Partially deleted in new
chr1	182381703	182391346	chr1:182381703-182391346	1	-	182384404	182391207	789624	8	3020,200,128,147,162,179,356,172,	0,3653,4056,4552,5427,6868,8793,9471,
#Partially deleted in new
chr1	182381704	182392206	chr1:182381704-182392206	1	-	182384404	182388737	0	8	3019,200,128,147,162,179,356,528,	0,3652,4055,4551,5426,6867,8792,9974,
#Partially deleted in new
chr1	182381704	182391404	chr1:182381704-182391404	1	-	182384404	182388737	0	7	3019,200,128,147,162,179,230,	0,3652,4055,4551,5426,6867,9470,
#Partially deleted in new
chr1	182382893	182391792	chr1:182382893-182391792	1	-	182384404	182388737	0	7	1830,200,128,147,162,179,1296,	0,2463,2866,3362,4237,5678,7603,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	182382893	182390304	chr1:182382893-182390304	0	-	182382893	182382893	8553170	2	4399,1733,	0,5678,
#Partially deleted in new
chr1	182384195	182391759	chr1:182384195-182391759	0	-	182384195	182384195	8553170	5	528,200,83,47,81,	0,1161,1564,4508,7483,
#Partially deleted in new
chr1	182384414	182385939	chr1:182384414-182385939	0	-	182384414	182384414	8553170	3	309,200,180,	0,942,1345,
#Partially deleted in new
chr1	182385402	182391773	chr1:182385402-182391773	0	-	182385402	182385402	8553170	6	154,128,147,162,179,599,	0,357,853,1728,3169,5772,
#Partially deleted in new
chr1	182385698	182391790	chr1:182385698-182391790	0	-	182385698	182385698	8553170	5	189,41,162,179,112,	0,663,1432,2873,5980,
#Partially deleted in new
chr1	182386194	182389069	chr1:182386194-182389069	0	-	182386194	182386194	8553170	3	208,162,498,	0,936,2377,
#Partially deleted in new
chr1	182386272	182391759	chr1:182386272-182391759	0	-	182386272	182386272	8553170	5	130,162,179,356,81,	0,858,2299,4224,5406,
#Partially deleted in new
chr1	182386774	182391774	chr1:182386774-182391774	0	-	182386774	182386774	8553170	3	518,179,96,	0,1797,4904,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	182398116	182400616	chr1:182398116-182400616	3	-	182399663	182400485	789624	1	2500,	0,
#Partially deleted in new
chr1	182407620	182414815	chr1:182407620-182414815	3	+	182407620	182407620	789624	4	412,80,118,130,	0,907,1622,7065,
#Deleted in new
chr1	182407770	182409332	chr1:182407770-182409332	0	+	182407770	182407770	8553170	3	262,80,90,	0,757,1472,
#Partially deleted in new
chr1	182409191	182473886	chr1:182409191-182473886	0	+	182473642	182473886	789624	2	169,312,	0,64383,
#Partially deleted in new
chr1	182409193	182473968	chr1:182409193-182473968	0	+	182472451	182473968	789624	3	167,162,394,	0,63202,64381,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	182433892	182434461	chr1:182433892-182434461	7	-	182433892	182433892	16724991	2	104,91,	0,478,
#Deleted in new
chr1	182441576	182442362	chr1:182441576-182442362	7	+	182441576	182441576	16724991	1	786,	0,
#Partially deleted in new
chr1	182447885	182472408	chr1:182447885-182472408	0	+	182471286	182472408	789624	7	149,22,83,75,130,105,13,	0,1392,6072,10433,12118,23396,24510,
#Partially deleted in new
chr1	182447890	182471381	chr1:182447890-182471381	0	+	182471286	182471381	789624	5	144,83,75,130,100,	0,6067,10428,12113,23391,
#Partially deleted in new
chr1	182450120	182472400	chr1:182450120-182472400	0	+	182450120	182450120	8553170	7	58,83,75,130,133,105,5,	0,3837,8198,9883,10503,21161,22275,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	182450121	182488748	chr1:182450121-182488748	0	+	182450121	182450121	8553170	8	57,83,75,130,105,162,968,464,	0,3836,8197,9882,21160,22274,23453,38163,
#Partially deleted in new
chr1	182450132	182460127	chr1:182450132-182460127	0	+	182450132	182450132	8553170	5	46,215,83,75,124,	0,229,3825,8186,9871,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	182450143	182489108	chr1:182450143-182489108	0	+	182450165	182488315	789624	8	35,83,75,130,133,63,83,129,	0,3814,8175,9860,10480,38141,38317,38836,
#Partially deleted in new
chr1	182450145	182560558	chr1:182450145-182560558	3	+	182450165	182556057	789624	22	33,83,75,130,162,968,63,223,108,106,194,118,121,130,175,139,125,110,87,67,199,280,	0,3812,8173,9858,22250,23429,38139,38834,42876,71858,77433,80098,80644,82516,90101,98171,98554,100954,103309,104481,105878,110133,
#Partially deleted in new
chr1	182450145	182560558	chr1:182450145-182560558	0	+	182450165	182551141	789624	22	33,83,75,130,105,162,968,63,223,108,106,194,118,121,130,175,139,110,87,67,199,280,	0,3812,8173,9858,21136,22250,23429,38139,38834,42876,71858,77433,80098,80644,82516,90101,98171,100954,103309,104481,105878,110133,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	182450148	182489061	chr1:182450148-182489061	0	+	182450165	182488304	789624	8	30,83,75,130,162,63,83,82,	0,3809,8170,9855,22247,38136,38312,38831,
#Partially deleted in new
chr1	182450157	182471377	chr1:182450157-182471377	0	+	182450165	182458350	789624	6	21,83,88,130,133,96,	0,3800,8148,9846,10466,21124,
#Partially deleted in new
chr1	182453381	182471375	chr1:182453381-182471375	0	+	182471286	182471375	789624	5	173,83,75,130,94,	0,576,4937,6622,17900,
#Partially deleted in new
chr1	182453383	182472487	chr1:182453383-182472487	0	+	182471286	182472487	789624	7	171,83,75,130,111,105,92,	0,574,4935,6620,7240,17898,19012,
#Partially deleted in new
chr1	182453969	182472605	chr1:182453969-182472605	0	+	182453969	182453969	8553170	4	71,75,130,210,	0,4349,6034,18426,
#Partially deleted in new
chr1	182474521	182560599	chr1:182474521-182560599	0	+	182474521	182493027	789624	16	21,63,108,106,194,118,121,130,175,139,125,110,87,67,199,321,	0,13763,18500,47482,53057,55722,56268,58140,65725,73795,74178,76578,78933,80105,81502,85757,
#Partially deleted in new
chr1	182488284	182560593	chr1:182488284-182560593	0	+	182488284	182532662	8553170	15	63,223,108,106,194,118,130,175,139,125,110,87,67,199,315,	0,695,4737,33719,39294,41959,44377,51962,60032,60415,62815,65170,66342,67739,71994,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	182492954	182560593	chr1:182492954-182560593	0	+	182492954	182492954	8553170	12	175,106,194,118,121,130,175,139,2510,87,1596,315,	0,29049,34624,37289,37835,39707,47292,55362,55745,60500,61672,67324,
#Partially deleted in new
chr1	182553469	182560593	chr1:182553469-182560593	0	+	182553469	182560312	789624	3	72,67,315,	0,1157,6809,
#Partially deleted in new
chr1	182556135	182560597	chr1:182556135-182560597	0	+	182556135	182556135	8553170	2	87,336,	0,4126,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	182573633	182589256	chr1:182573633-182589256	3	-	182575391	182586806	0	7	1945,134,133,206,86,1644,90,	0,2622,7591,8419,10447,11693,15533,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	182576771	182577040	chr1:182576771-182577040	3	-	182576771	182576771	8553170	1	269,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	182578120	182589256	chr1:182578120-182589256	1	-	182579953	182586806	0	6	1887,133,206,86,1644,90,	0,3104,3932,5960,7206,11046,
#Deleted in new
chr1	182598622	182604408	chr1:182598622-182604408	3	-	182600291	182604259	0	5	1891,167,65,111,193,	0,3343,3797,4606,5593,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	182615253	182616629	chr1:182615253-182616629	3	+	182615253	182615253	5263520	1	1376,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	182641815	182672914	chr1:182641815-182672914	1	-	182646734	182672824	0	6	5102,167,65,102,74,96,	0,6321,24153,25056,29841,31003,
#Partially deleted in new
chr1	182646103	182671929	chr1:182646103-182671929	1	-	182646734	182669649	0	7	814,167,65,102,129,74,81,	0,2033,19865,20768,23520,25553,25745,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	182646685	182672908	chr1:182646685-182672908	3	-	182646734	182669649	0	7	232,167,65,102,129,74,90,	0,1451,19283,20186,22938,24971,26133,
#Partially deleted in new
chr1	182646734	182671853	chr1:182646734-182671853	1	-	182646734	182669649	0	6	183,167,65,102,129,197,	0,1402,19234,20137,22889,24922,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	182658368	182672932	chr1:182658368-182672932	0	-	182658368	182658368	8553170	6	297,65,102,129,74,114,	0,7600,8503,11255,13288,14450,
#Partially deleted in new
chr1	182665990	182672251	chr1:182665990-182672251	0	-	182665990	182669649	789624	5	43,102,129,74,215,	0,881,3633,5666,6046,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	182666945	182684576	chr1:182666945-182684576	0	-	182666945	182666945	8553170	5	28,129,74,114,221,	0,2678,4711,5873,17410,
#Partially deleted in new
chr1	182712861	182714544	chr1:182712861-182714544	3	+	182712861	182712861	789624	2	27,232,	0,1451,
#Partially deleted in new
chr1	182733791	182734779	chr1:182733791-182734779	7	+	182733791	182733791	16724991	2	46,362,	0,626,
#Partially deleted in new
chr1	182789292	182830384	chr1:182789292-182830384	0	+	182789292	182789292	8553170	13	513,55,84,74,88,58,76,93,149,47,85,40,782,	0,2939,5063,14405,16852,22863,25490,27421,29248,29520,32822,36488,40310,
#Partially deleted in new
chr1	182789448	182830384	chr1:182789448-182830384	1	+	182806358	182828908	789624	11	357,74,387,58,76,93,149,47,85,40,1661,	0,14249,16696,22707,25334,27265,29092,29364,32666,36332,39275,
#Partially deleted in new
chr1	182789448	182812190	chr1:182789448-182812190	0	+	182789448	182789448	8553170	7	357,55,84,111,74,88,35,	0,2783,4907,6281,14249,16696,22707,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	182789736	182827020	chr1:182789736-182827020	0	+	182789736	182789736	8553170	14	69,55,84,74,88,123,128,58,76,93,149,47,85,1240,	0,2495,4619,13961,16408,19448,20106,22419,25046,26977,28804,29076,32378,36044,
#Partially deleted in new
chr1	182789768	182830384	chr1:182789768-182830384	1	+	182794371	182829679	789624	11	37,55,84,74,88,58,76,93,149,40,782,	0,2463,4587,13929,16376,22387,25014,26945,28772,36012,39834,
#Partially deleted in new
chr1	182789772	182816747	chr1:182789772-182816747	0	+	182789772	182789772	8553170	9	33,83,55,84,74,88,58,76,34,	0,1475,2459,4583,13925,16372,22383,25010,26941,
#Partially deleted in new
chr1	182792230	182806532	chr1:182792230-182806532	0	+	182792230	182792230	8553170	3	56,74,388,	0,11467,13914,
#Partially deleted in new
chr1	182792258	182830132	chr1:182792258-182830132	3	+	182794371	182828908	789624	12	28,84,74,88,58,76,93,149,47,85,40,1409,	0,2097,11439,13886,19897,22524,24455,26282,26554,29856,33522,36465,
#Partially deleted in new
chr1	182794349	182830384	chr1:182794349-182830384	1	+	182794371	182828908	789624	11	90,74,88,58,76,93,149,47,85,40,1661,	0,9348,11795,17806,20433,22364,24191,24463,27765,31431,34374,
#Partially deleted in new
chr1	182794349	182829679	chr1:182794349-182829679	1	+	182794371	182829679	789624	9	90,74,88,58,76,93,149,40,77,	0,9348,11795,17806,20433,22364,24191,31431,35253,
#Partially deleted in new
chr1	182794349	182830384	chr1:182794349-182830384	1	+	182794371	182825820	789624	10	90,74,88,58,76,93,149,47,40,1661,	0,9348,11795,17806,20433,22364,24191,24463,31431,34374,
#Partially deleted in new
chr1	182818637	182829909	chr1:182818637-182829909	0	+	182818637	182818637	8553170	2	52,307,	0,10965,
#Partially deleted in new
chr1	182839368	182887751	chr1:182839368-182887751	3	+	182842566	182887434	0	28	88,133,141,112,113,149,47,137,90,162,78,192,142,83,157,101,214,95,74,153,161,112,162,128,230,116,201,669,	0,3176,3925,12864,13937,14661,17163,18735,19182,19364,19671,20624,27075,27592,32968,35485,36681,37078,37461,38652,39881,41128,41895,42151,43770,44151,45244,47714,
#Partially deleted in new
chr1	182839733	182854142	chr1:182839733-182854142	0	+	182839733	182839733	8553170	6	202,133,141,112,113,113,	0,2811,3560,12499,13572,14296,
#Deleted in new
chr1	182854040	182856572	chr1:182854040-182856572	0	+	182854040	182854040	8553170	3	138,137,41,	0,1536,2491,
#Partially deleted in new
chr1	182858829	182860305	chr1:182858829-182860305	0	+	182858829	182858829	8553170	3	65,78,313,	0,210,1163,
#Deleted in new
chr1	182876128	182876749	chr1:182876128-182876749	0	+	182876128	182876128	8553170	2	135,303,	0,318,
#Partially deleted in new
chr1	182876913	182881645	chr1:182876913-182881645	0	+	182876913	182876913	8553170	6	134,153,161,112,162,126,	0,1107,2336,3583,4350,4606,
#Partially deleted in new
chr1	182877417	182887747	chr1:182877417-182887747	0	+	182877417	182877417	8553170	9	756,161,112,162,128,230,116,201,665,	0,1832,3079,3846,4102,5721,6102,7195,9665,
#Partially deleted in new
chr1	182881284	182887747	chr1:182881284-182887747	0	+	182881284	182881284	8553170	7	141,128,78,49,116,201,665,	0,235,1854,2035,2235,3328,5798,
#Partially deleted in new
chr1	182899864	182953370	chr1:182899864-182953370	3	-	182899982	182953133	789624	10	370,123,251,154,106,219,87,215,150,642,	0,3174,4315,5631,29782,39311,39602,40464,51453,52864,
#Partially deleted in new
chr1	182899864	182953525	chr1:182899864-182953525	0	-	182899864	182899864	8553170	9	370,123,251,154,106,378,215,146,797,	0,3174,4315,5631,29782,39311,40464,51453,52864,
#Partially deleted in new
chr1	182939473	182952749	chr1:182939473-182952749	0	-	182939473	182939473	8553170	4	80,215,150,247,	0,855,11844,13029,
#Deleted in new
chr1	182942114	182942404	chr1:182942114-182942404	7	-	182942114	182942114	16724991	1	290,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	182944364	182944490	chr1:182944364-182944490	3	-	182944364	182944364	8553170	1	126,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	182944364	182944490	chr1:182944364-182944490	7	-	182944364	182944364	16724991	1	126,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	182950522	182953111	chr1:182950522-182953111	0	-	182950522	182950522	8553170	4	159,150,48,383,	0,795,1414,2206,
#Deleted in new
chr1	182955389	182956148	chr1:182955389-182956148	7	-	182955389	182955389	16724991	1	759,	0,
#Deleted in new
chr1	182959073	182960405	chr1:182959073-182960405	7	-	182959073	182959073	16724991	1	1332,	0,
#Partially deleted in new
chr1	183023459	183145592	chr1:183023459-183145592	3	+	183023716	183142790	0	28	675,305,131,167,189,118,99,137,123,190,113,222,189,246,154,143,179,157,206,80,138,145,150,115,200,159,100,3059,	0,79868,84816,87028,91071,92060,93117,93307,93860,94074,94574,98263,98603,101171,101937,102660,103766,105134,106884,107839,108940,109946,111200,111582,112926,114209,116944,119074,
#Partially deleted in new
chr1	183096543	183110631	chr1:183096543-183110631	0	+	183110518	183110631	789624	4	77,305,131,144,	0,6784,11732,13944,
#Partially deleted in new
chr1	183110580	183116986	chr1:183110580-183116986	0	+	183110580	183110580	8553170	5	74,189,118,99,220,	0,3950,4939,5996,6186,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	183125187	183128728	chr1:183125187-183128728	0	+	183125187	183125187	8553170	4	363,143,179,135,	0,932,2038,3406,
#Partially deleted in new
chr1	183128595	183133538	chr1:183128595-183133538	0	+	183128595	183128595	8553170	5	225,206,80,138,133,	0,1748,2703,3804,4810,
#Partially deleted in new
chr1	183134689	183137905	chr1:183134689-183137905	0	+	183134689	183134689	8553170	4	120,115,200,237,	0,352,1696,2979,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr1	183186237	183241261	chr1:183186237-183241261	1	+	183186352	183240399	789624	22	194,189,136,99,137,123,190,113,219,183,246,143,157,206,80,156,145,153,115,200,159,970,	0,21643,29215,32152,34587,35851,36897,39370,40460,41277,42136,44723,45949,46414,48129,49337,50222,51114,52069,53126,53802,54054,
#Partially deleted in new
chr1	183186287	183244900	chr1:183186287-183244900	3	+	183186352	183243400	789624	23	144,189,136,99,137,123,190,113,219,183,246,143,157,206,80,156,145,153,115,200,159,100,1754,	0,21593,29165,32102,34537,35801,36847,39320,40410,41227,42086,44673,45899,46364,48079,49287,50172,51064,52019,53076,53752,54004,56859,
#Deleted in new
chr1	183239500	183240379	chr1:183239500-183240379	0	+	183239500	183239500	8553170	2	698,78,	0,801,
#Deleted in new
chr1	183243433	183243906	chr1:183243433-183243906	0	+	183243433	183243433	8553170	3	35,153,99,	0,123,374,
#Partially deleted in new
chr1	183248236	183418602	chr1:183248236-183418602	3	-	183252640	183418267	789624	11	4507,68,102,77,45,81,127,79,68,89,420,	0,12765,12965,30316,35758,36473,38425,41891,44553,45468,169946,
#Partially deleted in new
chr1	183248236	183304874	chr1:183248236-183304874	1	-	183252640	183304739	789624	11	4507,68,102,77,45,81,127,79,68,89,205,	0,12765,12965,30316,35758,36473,38425,41891,44553,45468,56433,
#Partially deleted in new
chr1	183252423	183278685	chr1:183252423-183278685	0	-	183252423	183252423	8553170	4	320,68,102,133,	0,8578,8778,26129,
#Deleted in new
chr1	183266601	183267285	chr1:183266601-183267285	7	+	183266601	183266601	16724991	1	684,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	183282865	183290743	chr1:183282865-183290743	0	-	183282865	183282865	8553170	5	1174,81,127,79,112,	0,1844,3796,7262,7766,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	183460873	183471746	chr1:183460873-183471746	3	-	183460873	183460873	789624	5	795,196,126,76,1027,	0,892,8800,9591,9846,
#Partially deleted in new
chr1	183461745	183471729	chr1:183461745-183471729	1	-	183461745	183461745	8553170	5	94,126,76,123,47,	0,7928,8719,8974,9937,
#Deleted in new
chr1	183470019	183472265	chr1:183470019-183472265	0	-	183470019	183470019	8553170	1	2246,	0,
#Partially deleted in new
chr1	183472215	183529014	chr1:183472215-183529014	0	+	183472620	183527696	789624	8	434,32,118,133,172,106,72,123,	0,40621,43658,45472,54380,55410,55740,56676,
#Partially deleted in new
chr1	183472477	183554193	chr1:183472477-183554193	1	+	183502275	183551931	789624	24	172,139,32,118,133,172,72,151,136,163,157,71,61,120,289,145,383,372,150,81,160,171,146,2376,	0,29775,40359,43396,45210,54118,55478,56414,56920,60686,61198,64667,65902,68506,69598,71875,72452,73488,74625,76730,77286,78273,78567,79340,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	183472499	183526646	chr1:183472499-183526646	0	+	183502275	183526646	789624	7	150,137,139,32,118,133,51,	0,28631,29753,40337,43374,45188,54096,
#Partially deleted in new
chr1	183472499	183552263	chr1:183472499-183552263	1	+	183515938	183551931	0	22	150,118,133,172,72,151,136,163,157,71,61,120,427,145,383,372,150,81,160,171,146,446,	0,43374,45188,54096,55456,56392,56898,60664,61176,64645,65880,68484,69576,71853,72430,73466,74603,76708,77264,78251,78545,79318,
#Partially deleted in new
chr1	183472501	183554186	chr1:183472501-183554186	3	+	183472620	183551931	0	22	148,32,118,133,172,72,151,136,163,157,71,61,120,427,145,383,372,81,160,171,146,2369,	0,40335,43372,45186,54094,55454,56390,56896,60662,61174,64643,65878,68482,69574,71851,72428,73464,76706,77262,78249,78543,79316,
#Partially deleted in new
chr1	183472501	183546129	chr1:183472501-183546129	0	+	183515938	183546129	789624	16	148,118,133,172,72,151,136,163,157,71,61,120,289,145,383,164,	0,43372,45186,54094,55454,56390,56896,60662,61174,64643,65878,68482,69574,71851,72428,73464,
#Partially deleted in new
chr1	183472501	183526682	chr1:183472501-183526682	0	+	183472620	183517668	789624	5	148,32,118,195,87,	0,40335,43372,45124,54094,
#Partially deleted in new
chr1	183472502	183554188	chr1:183472502-183554188	1	+	183472620	183553201	0	23	147,32,118,133,172,72,151,136,163,157,71,61,120,289,145,383,372,150,81,160,171,146,1212,	0,40334,43371,45185,54093,55453,56389,56895,60661,61173,64642,65877,68481,69573,71850,72427,73463,74600,76705,77261,78248,78542,80474,
#Partially deleted in new
chr1	183472526	183554190	chr1:183472526-183554190	1	+	183472620	183551931	0	22	123,32,118,133,172,72,151,136,163,157,71,61,120,289,145,383,372,81,160,171,146,2373,	0,40310,43347,45161,54069,55429,56365,56871,60637,61149,64618,65853,68457,69549,71826,72403,73439,76681,77237,78224,78518,79291,
#Partially deleted in new
chr1	183472566	183516086	chr1:183472566-183516086	0	+	183472566	183472566	8553170	3	83,32,213,	0,40270,43307,
#Partially deleted in new
chr1	183472620	183517665	chr1:183472620-183517665	1	+	183472620	183517665	789624	4	29,32,118,40,	0,40216,43253,45005,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	183472931	183515894	chr1:183472931-183515894	0	+	183502275	183515894	789624	6	59,178,137,139,32,21,	0,789,28199,29321,39905,42942,
#Partially deleted in new
chr1	183502287	183513356	chr1:183502287-183513356	0	+	183502287	183502287	8553170	2	104,520,	0,10549,
#Partially deleted in new
chr1	183518615	183529517	chr1:183518615-183529517	0	+	183518615	183518615	8553170	5	67,172,72,151,120,	0,7980,9340,10276,10782,
#Deleted in new
chr1	183548940	183550088	chr1:183548940-183550088	0	+	183548940	183548940	8553170	2	348,325,	0,823,
#Partially deleted in new
chr1	183550834	183598246	chr1:183550834-183598246	0	+	183550834	183550834	8553170	4	87,146,87,236,	0,210,46934,47176,
#Partially deleted in new
chr1	183555562	183590604	chr1:183555562-183590604	1	-	183556117	183590329	0	14	668,178,112,152,26,76,69,142,44,60,108,109,83,449,	0,4533,7632,7871,8442,10141,11357,11641,13579,15217,17622,22036,31332,34593,
#Partially deleted in new
chr1	183555562	183590604	chr1:183555562-183590604	1	-	183556117	183590329	0	13	668,178,112,152,26,76,69,142,44,60,109,83,449,	0,4533,7632,7871,8442,10141,11357,11641,13579,15217,22036,31332,34593,
#Partially deleted in new
chr1	183555724	183590581	chr1:183555724-183590581	1	-	183556117	183590329	0	15	506,178,112,152,26,76,69,142,44,60,108,135,109,83,426,	0,4371,7470,7709,8280,9979,11195,11479,13417,15055,17460,18762,21874,31170,34431,
#Partially deleted in new
chr1	183560245	183564051	chr1:183560245-183564051	0	-	183560245	183560245	8553170	3	28,112,618,	0,2949,3188,
#Partially deleted in new
chr1	183563268	183569225	chr1:183563268-183569225	0	-	183563268	183563564	789624	5	38,152,26,76,84,	0,165,736,2435,5873,
#Partially deleted in new
chr1	183563271	183569225	chr1:183563271-183569225	0	-	183563271	183567275	789624	7	35,152,26,76,69,142,84,	0,162,733,2432,3648,3932,5870,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	183620845	183635726	chr1:183620845-183635726	3	-	183627531	183635659	789624	4	6749,177,73,210,	0,9615,12236,14671,
#Partially deleted in new
chr1	183623265	183635682	chr1:183623265-183635682	1	-	183623456	183635659	789624	4	206,177,73,166,	0,7195,9816,12251,
#Partially deleted in new
chr1	183626193	183633958	chr1:183626193-183633958	0	-	183626193	183626193	8553170	3	1401,177,877,	0,4267,6888,
#Partially deleted in new
chr1	183626457	183635757	chr1:183626457-183635757	1	-	183627531	183635659	789624	4	1137,177,82,241,	0,4003,6624,9059,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	183630324	183633309	chr1:183630324-183633309	0	-	183630324	183630324	8553170	1	2985,	0,
#Partially deleted in new
chr1	183636084	183928531	chr1:183636084-183928531	3	+	183742157	183926292	789624	19	417,164,111,209,78,185,125,216,104,85,90,87,33,122,90,187,255,115,2427,	0,106041,170290,211481,229911,244531,247701,248638,252389,255992,261723,264065,266483,268765,270927,275997,280362,286137,290020,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	183646403	183653313	chr1:183646403-183653313	3	-	183647677	183648781	789624	2	2408,242,	0,6668,
#Partially deleted in new
chr1	183647566	183653316	chr1:183647566-183653316	0	-	183647566	183647566	8553170	2	231,245,	0,5505,
#Partially deleted in new
chr1	183709304	183710240	chr1:183709304-183710240	7	-	183709304	183709304	16724991	1	936,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	183754417	183754937	chr1:183754417-183754937	3	-	183754417	183754417	8553170	3	162,107,95,	0,246,425,
#Partially deleted in new
chr1	183805119	183928531	chr1:183805119-183928531	1	+	183805297	183926292	789624	18	205,111,209,78,185,125,216,104,85,90,87,33,122,90,187,255,115,2427,	0,1255,42446,60876,75496,78666,79603,83354,86957,92688,95030,97448,99730,101892,106962,111327,117102,120985,
#Partially deleted in new
chr1	183929853	184037729	chr1:183929853-184037729	1	-	183930228	184037357	789624	12	436,207,128,133,107,77,120,205,135,118,111,635,	0,10727,14342,15578,21153,24908,34047,39415,43762,45243,48556,107241,
#Partially deleted in new
chr1	183929888	183936924	chr1:183929888-183936924	0	-	183929888	183929888	8553170	2	401,1747,	0,5289,
#Partially deleted in new
chr1	183935836	184037729	chr1:183935836-184037729	3	-	183938760	184037357	789624	12	3201,207,128,133,107,77,120,205,135,118,111,635,	0,4744,8359,9595,15170,18925,28064,33432,37779,39260,42573,101258,
#Partially deleted in new
chr1	183935836	183946618	chr1:183935836-183946618	1	-	183938760	183945524	789624	4	3201,207,128,1187,	0,4744,8359,9595,
#Partially deleted in new
chr1	183937964	183964500	chr1:183937964-183964500	1	-	183938760	183964063	789624	7	1073,207,128,133,107,77,600,	0,2616,6231,7467,13042,16797,25936,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	184051650	184074212	chr1:184051650-184074212	1	+	184051755	184072863	0	4	240,82,136,1386,	0,2703,3077,21176,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	184051650	184074212	chr1:184051650-184074212	3	+	184051755	184072847	0	5	240,82,136,142,1386,	0,2703,3077,20506,21176,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	184051675	184074206	chr1:184051675-184074206	1	+	184051755	184072847	789624	5	215,82,136,154,1380,	0,2678,3052,20481,21151,
#Partially deleted in new
chr1	184051678	184072986	chr1:184051678-184072986	0	+	184051755	184058167	789624	6	212,82,136,80,142,160,	0,2675,3049,6482,20478,21148,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	184051685	184097485	chr1:184051685-184097485	1	+	184051755	184095804	789624	4	205,82,136,1796,	0,2668,3042,44004,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	184051698	184074212	chr1:184051698-184074212	1	+	184051755	184072840	789624	5	192,82,136,38,1386,	0,2655,3029,20458,21128,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	184051711	184074127	chr1:184051711-184074127	1	+	184051755	184072355	789624	4	179,82,136,1971,	0,2642,3016,20445,
#Partially deleted in new
chr1	184051717	184071220	chr1:184051717-184071220	0	+	184051717	184051717	8553170	4	173,82,136,605,	0,2636,3010,18898,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	184051717	184095845	chr1:184051717-184095845	1	+	184051755	184095070	789624	5	173,82,136,62,156,	0,2636,3010,43313,43972,
#Partially deleted in new
chr1	184051721	184121999	chr1:184051721-184121999	0	+	184051755	184054748	789624	5	169,136,96,116,213,	0,3006,61143,67998,70065,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	184051729	184073951	chr1:184051729-184073951	0	+	184051755	184054366	789624	5	161,75,136,142,1125,	0,2631,2998,20427,21097,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	184051732	184122529	chr1:184051732-184122529	0	+	184051755	184119792	789624	6	158,82,136,116,286,743,	0,2621,2995,67987,69232,70054,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	184051755	184073933	chr1:184051755-184073933	0	+	184051755	184070676	789624	5	135,82,136,117,1777,	0,2598,2972,18860,20401,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	184051759	184073846	chr1:184051759-184073846	0	+	184051759	184070676	789624	6	131,82,136,117,142,1020,	0,2594,2968,18856,20397,21067,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	184051780	184095845	chr1:184051780-184095845	0	+	184051780	184095827	789624	5	110,82,136,100,156,	0,2573,2947,41844,43909,
#Partially deleted in new
chr1	184051793	184073615	chr1:184051793-184073615	0	+	184051793	184072161	789624	4	97,82,142,789,	0,2560,20363,21033,
#Partially deleted in new
chr1	184051864	184095617	chr1:184051864-184095617	0	+	184051864	184093760	789624	4	26,82,136,1993,	0,2489,2863,41760,
#Partially deleted in new
chr1	184054356	184073568	chr1:184054356-184073568	0	+	184054356	184072120	789624	4	79,136,144,742,	0,371,17694,18470,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	184054360	184055069	chr1:184054360-184055069	0	+	184054360	184054360	8553170	2	75,342,	0,367,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	184119041	184123978	chr1:184119041-184123978	0	+	184119041	184119041	8553170	4	794,286,632,978,	0,1923,2745,3959,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	184171713	184171823	chr1:184171713-184171823	3	-	184171713	184171713	8553170	1	110,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	184315657	184315765	chr1:184315657-184315765	3	+	184315657	184315657	8553170	1	108,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	184329070	184332826	chr1:184329070-184332826	3	+	184329070	184329070	8553170	2	104,229,	0,3527,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	184335657	184335949	chr1:184335657-184335949	3	+	184335657	184335657	8553170	1	292,	0,
#Deleted in new
chr1	184385752	184386704	chr1:184385752-184386704	3	-	184385752	184385752	8553170	1	952,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	184387057	184629020	chr1:184387057-184629020	3	+	184477509	184619556	789624	6	311,218,95,77,61,9503,	0,90328,120530,203681,211343,232460,
#Partially deleted in new
chr1	184387270	184621974	chr1:184387270-184621974	0	+	184477509	184592267	8553170	7	98,218,95,77,66,61,2457,	0,90115,120317,203468,204954,211130,232247,
#Partially deleted in new
chr1	184408336	184412360	chr1:184408336-184412360	3	+	184408336	184408336	8553170	2	78,345,	0,3679,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	184539992	184592248	chr1:184539992-184592248	0	+	184539992	184539992	8553170	5	109,103,113,77,24,	0,2553,5927,50746,52232,
#Deleted in new
chr1	184566510	184567835	chr1:184566510-184567835	7	+	184566510	184566510	16724991	1	1325,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	184568398	184619936	chr1:184568398-184619936	0	+	184568398	184568398	8553170	4	87,77,61,419,	0,22340,30002,51119,
#Partially deleted in new
chr1	184590747	184599609	chr1:184590747-184599609	0	+	184590747	184590747	8553170	3	68,61,270,	0,7653,8592,
#Partially deleted in new
chr1	184635653	184664303	chr1:184635653-184664303	3	-	184635653	184635653	8553170	8	164,117,149,61,91,43,165,887,	0,854,5373,5627,6444,6669,9206,27763,
#Partially deleted in new
chr1	184690230	184754913	chr1:184690230-184754913	3	-	184694062	184754646	789624	20	4242,186,166,192,154,155,166,125,84,84,126,98,106,135,154,113,40,101,46,425,	0,12580,16412,17922,20163,21492,22202,26657,27309,28931,29212,31058,33520,36024,42606,44300,46794,47380,59316,64258,
#Partially deleted in new
chr1	184690492	184754907	chr1:184690492-184754907	1	-	184694062	184754517	789624	21	3980,48,186,166,192,154,155,166,125,84,84,126,98,106,135,154,113,40,101,46,419,	0,11004,12318,16150,17660,19901,21230,21940,26395,27047,28669,28950,30796,33258,35762,42344,44038,46532,47118,59054,63996,
#Partially deleted in new
chr1	184690502	184711757	chr1:184690502-184711757	0	-	184694062	184711757	789624	8	1643,67,429,186,166,192,154,35,	0,2863,3541,12308,16140,17650,19891,21220,
#Partially deleted in new
chr1	184694467	184710469	chr1:184694467-184710469	0	-	184694467	184694467	8553170	5	5,186,166,58,76,	0,8343,12175,13685,15926,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	184720509	184754873	chr1:184720509-184754873	0	-	184720509	184720509	8553170	8	877,106,135,154,113,40,101,385,	0,3241,5745,12327,14021,16515,17101,33979,
#Partially deleted in new
chr1	184732782	184737736	chr1:184732782-184737736	0	-	184732782	184732782	8553170	4	208,113,40,126,	0,1748,4242,4828,
#Partially deleted in new
chr1	184790723	184805985	chr1:184790723-184805985	0	-	184791024	184805985	789624	4	342,112,108,40,	0,7355,12861,15222,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	184791029	184974550	chr1:184791029-184974550	3	-	184794976	184974356	789624	14	5068,112,108,111,162,188,163,105,116,168,115,132,131,249,	0,7049,12555,14916,17044,27608,32137,32608,40817,93603,99078,103045,108149,183272,
#Partially deleted in new
chr1	184794117	184868041	chr1:184794117-184868041	0	-	184794117	184794117	8553170	9	1980,112,108,111,162,188,163,116,178,	0,3961,9467,11828,13956,24520,29049,37729,73746,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	184821427	184821489	chr1:184821427-184821489	3	-	184821427	184821427	8553170	1	62,	0,
#Partially deleted in new
chr1	184823649	184868558	chr1:184823649-184868558	0	-	184823649	184823649	8553170	3	93,116,695,	0,8197,44214,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	184887738	184890185	chr1:184887738-184890185	0	-	184887738	184887738	8553170	2	443,78,	0,2369,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	185001526	185008683	chr1:185001526-185008683	3	+	185001526	185001526	789624	2	101,990,	0,6167,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	185014950	185015067	chr1:185014950-185015067	7	-	185014950	185014950	16724991	1	117,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	185045363	185102608	chr1:185045363-185102608	3	+	185087553	185100301	0	7	286,89,161,216,273,172,2409,	0,42188,46215,47697,52708,54427,54836,
#Partially deleted in new
chr1	185045525	185101057	chr1:185045525-185101057	1	+	185087553	185100301	0	6	124,89,161,273,172,858,	0,42026,46053,52546,54265,54674,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	185045535	185092006	chr1:185045535-185092006	0	+	185045535	185045535	8553170	3	114,89,428,	0,42016,46043,
#Partially deleted in new
chr1	185046095	185098344	chr1:185046095-185098344	0	+	185087553	185098344	789624	5	200,89,161,216,273,	0,41456,45483,46965,51976,
#Deleted in new
chr1	185071566	185072035	chr1:185071566-185072035	7	-	185071566	185071566	16724991	1	469,	0,
#Partially deleted in new
chr1	185118097	185156981	chr1:185118097-185156981	3	-	185120018	185156712	789624	15	2174,127,63,167,79,191,213,250,80,124,130,65,114,111,504,	0,2285,5759,6846,10571,19508,21269,21875,25259,25808,27341,29084,32281,33727,38380,
#Deleted in new
chr1	185120052	185120869	chr1:185120052-185120869	0	-	185120052	185120052	8553170	2	219,487,	0,330,
#Partially deleted in new
chr1	185124839	185139560	chr1:185124839-185139560	0	-	185124935	185139560	789624	4	271,79,191,194,	0,3829,12766,14527,
#Partially deleted in new
chr1	185143919	185157072	chr1:185143919-185157072	0	-	185143919	185143919	8553170	6	110,130,65,114,111,89,	0,1519,3262,6459,7905,13064,
#Partially deleted in new
chr1	185157079	185291007	chr1:185157079-185291007	1	+	185160841	185290803	789624	19	85,93,81,59,742,60,112,102,189,94,146,164,139,149,188,132,67,65,334,	0,3753,9492,11260,17292,23311,24866,27163,27663,33469,45574,47620,49545,57427,64769,74497,114243,119524,133594,
#Partially deleted in new
chr1	185157158	185291765	chr1:185157158-185291765	3	+	185160841	185290803	789624	19	156,93,81,59,742,60,112,102,189,94,146,164,139,149,188,132,67,65,1092,	0,3674,9413,11181,17213,23232,24787,27084,27584,33390,45495,47541,49466,57348,64690,74418,114164,119445,133515,
#Partially deleted in new
chr1	185157481	185174626	chr1:185157481-185174626	0	+	185160841	185174626	789624	5	145,93,81,59,255,	0,3351,9090,10858,16890,
#Partially deleted in new
chr1	185171334	185171710	chr1:185171334-185171710	7	-	185171334	185171334	16724991	1	376,	0,
#Deleted in new
chr1	185226807	185227700	chr1:185226807-185227700	7	-	185226807	185226807	16724991	1	893,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	185251312	185251411	chr1:185251312-185251411	3	+	185251312	185251312	8553170	1	99,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	185257910	185258015	chr1:185257910-185258015	3	-	185257910	185257910	8553170	1	105,	0,
#Partially deleted in new
chr1	185262285	185264356	chr1:185262285-185264356	7	-	185262285	185262285	16724991	3	229,531,392,	0,985,1679,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	185266534	185266627	chr1:185266534-185266627	3	+	185266534	185266534	8553170	1	93,	0,
#Partially deleted in new
chr1	185280843	185281816	chr1:185280843-185281816	7	+	185280843	185280843	16724991	1	973,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	185292383	185294372	chr1:185292383-185294372	3	-	185292383	185292383	8553170	1	1989,	0,
#Partially deleted in new
chr1	185296387	185317329	chr1:185296387-185317329	3	-	185298034	185309493	0	15	1901,174,132,127,122,225,130,108,126,174,76,170,129,228,377,	0,3322,3611,3829,4049,4584,5046,9148,10626,11101,12412,12615,12995,14707,20565,
#Partially deleted in new
chr1	185296387	185306500	chr1:185296387-185306500	0	-	185296387	185296387	8553170	8	1901,174,132,127,122,225,130,965,	0,3322,3611,3829,4049,4584,5046,9148,
#Partially deleted in new
chr1	185297014	185317273	chr1:185297014-185317273	0	-	185297014	185297014	8553170	16	1274,174,132,127,122,225,130,108,141,126,174,76,170,129,228,321,	0,2695,2984,3202,3422,3957,4419,8521,9470,9999,10474,11785,11988,12368,14080,19938,
#Partially deleted in new
chr1	185297770	185301714	chr1:185297770-185301714	0	-	185297770	185297770	8553170	6	518,174,132,127,122,743,	0,1939,2228,2446,2666,3201,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	185298404	185301638	chr1:185298404-185301638	0	-	185298404	185298404	8553170	5	1479,132,127,122,667,	0,1594,1812,2032,2567,
#Partially deleted in new
chr1	185300096	185300918	chr1:185300096-185300918	0	-	185300096	185300096	8553170	3	34,127,482,	0,120,340,
#Partially deleted in new
chr1	185300245	185301249	chr1:185300245-185301249	0	-	185300245	185300245	8553170	2	313,278,	0,726,
#Partially deleted in new
chr1	185306749	185307662	chr1:185306749-185307662	0	-	185306959	185307662	789624	2	390,174,	0,739,
#Partially deleted in new
chr1	185307679	185311127	chr1:185307679-185311127	1	-	185307966	185309493	789624	5	338,76,170,129,33,	0,1120,1323,1703,3415,
#Deleted in new
chr1	185317778	185318530	chr1:185317778-185318530	3	+	185317778	185317778	8553170	1	752,	0,
#Partially deleted in new
chr1	185323845	185335007	chr1:185323845-185335007	4	-	185323845	185323845	16724991	4	183,283,122,47,	0,9174,10420,11115,
#Partially deleted in new
chr1	185331256	185335039	chr1:185331256-185335039	5	-	185331256	185331256	16724991	4	125,283,122,79,	0,1763,3009,3704,
#Deleted in new
chr1	185332902	185333280	chr1:185332902-185333280	5	-	185332902	185332902	16724991	1	378,	0,
#Deleted in new
chr1	185434243	185434305	chr1:185434243-185434305	3	+	185434243	185434243	8553170	1	62,	0,
#Deleted in new
chr1	185435838	185436047	chr1:185435838-185436047	7	+	185435838	185435838	16724991	1	209,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	185518650	185520986	chr1:185518650-185520986	3	+	185518650	185518650	8553170	1	2336,	0,
#Partially deleted in new
chr1	185558371	185565631	chr1:185558371-185565631	1	-	185558371	185558371	8553170	3	304,161,158,	0,4796,7102,
#Partially deleted in new
chr1	185558371	185565567	chr1:185558371-185565567	0	-	185558371	185558371	8553170	3	304,90,94,	0,4867,7102,
#Partially deleted in new
chr1	185558381	185628488	chr1:185558381-185628488	0	-	185558381	185558381	789624	4	294,161,64,82,	0,4786,68110,70025,
#Deleted in new
chr1	185630427	185630528	chr1:185630427-185630528	3	-	185630427	185630427	8553170	1	101,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	185634072	185634182	chr1:185634072-185634182	3	-	185634072	185634072	8553170	1	110,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	185655001	185657168	chr1:185655001-185657168	3	+	185655001	185655001	8553170	2	209,692,	0,1475,
#Partially deleted in new
chr1	185734550	186190949	chr1:185734550-186190949	3	+	185734779	186189878	789624	107	497,71,159,123,172,107,121,264,145,122,276,142,128,114,159,195,96,128,145,113,160,169,128,273,96,195,131,148,127,155,279,282,109,170,155,124,102,177,152,124,176,97,123,162,282,168,114,87,192,174,114,146,151,195,114,188,97,162,114,203,82,132,150,160,125,184,98,279,197,82,137,142,145,128,157,122,165,108,138,135,270,191,214,135,191,82,270,171,171,171,171,171,171,150,138,122,238,63,120,135,114,126,129,351,120,127,1438,	0,111475,129919,131190,174786,177123,187828,188839,190496,193995,198998,227967,229217,231251,235784,243236,246427,247711,249618,252881,254937,255724,258631,260264,262878,265494,266747,267043,269167,272577,280608,281407,282412,283632,284990,288479,303383,304278,305177,306462,311137,314192,318401,319274,320842,322683,327300,327963,330687,333283,335112,336061,340190,341877,343556,346656,348314,351695,352666,352892,353381,353594,354055,356207,358583,358935,359725,360692,368921,372333,373910,378261,379428,380268,380707,382443,382908,384640,385194,385460,388400,391053,393527,395415,395956,397777,402117,402947,403251,409622,409982,410852,411202,416649,417055,418199,419199,430560,431633,432257,436786,437455,439963,443865,447617,453332,454961,
#Partially deleted in new
chr1	185957068	185993437	chr1:185957068-185993437	0	+	185957068	185957068	8553170	13	72,149,128,114,159,195,96,128,145,113,160,169,256,	0,5449,6699,8733,13266,20718,23909,25193,27100,30363,32419,33206,36113,
#Partially deleted in new
chr1	185963807	185978145	chr1:185963807-185978145	0	+	185963807	185963807	8553170	4	88,114,159,359,	0,1994,6527,13979,
#Partially deleted in new
chr1	186153825	186172118	chr1:186153825-186172118	0	+	186153825	186153825	8553170	3	162,114,113,	0,17511,18180,
#Partially deleted in new
chr1	186171386	186189665	chr1:186171386-186189665	0	+	186171386	186189665	789624	6	64,126,129,120,127,154,	0,619,3127,10781,16496,18125,
#Partially deleted in new
chr1	186296278	186308682	chr1:186296278-186308682	0	+	186296875	186308682	789624	4	15,106,120,2365,	0,567,5313,10039,
#Partially deleted in new
chr1	186296278	186314562	chr1:186296278-186314562	1	+	186296875	186313778	789624	12	15,106,120,150,129,2823,78,137,157,198,126,882,	0,567,5313,7829,8515,10039,13514,14755,15161,15896,16490,17402,
#Partially deleted in new
chr1	186296278	186314562	chr1:186296278-186314562	1	+	186296875	186313778	789624	11	15,106,123,120,2823,78,137,157,198,126,882,	0,567,3812,5313,10039,13514,14755,15161,15896,16490,17402,
#Partially deleted in new
chr1	186296278	186314562	chr1:186296278-186314562	3	+	186296875	186313778	789624	13	15,106,123,120,150,129,2823,78,137,157,198,126,882,	0,567,3812,5313,7829,8515,10039,13514,14755,15161,15896,16490,17402,
#Partially deleted in new
chr1	186296278	186306478	chr1:186296278-186306478	0	+	186296875	186306478	789624	5	15,106,120,129,161,	0,567,5313,8515,10039,
#Partially deleted in new
chr1	186296278	186314562	chr1:186296278-186314562	1	+	186296875	186313778	789624	12	15,106,123,120,150,2823,78,137,157,198,126,882,	0,567,3812,5313,7829,10039,13514,14755,15161,15896,16490,17402,
#Boundary problem: need 51, got 0, diff 51, mapped 0.0
chr1	186311651	186375325	chr1:186311651-186375325	3	-	186313970	186375028	0	51	2375,96,119,157,96,107,95,69,185,91,132,201,84,149,273,209,62,206,199,144,211,131,132,138,148,185,204,117,153,167,166,141,135,163,149,134,164,227,108,198,92,141,88,81,93,165,104,97,74,105,448,	0,2977,5830,6795,7081,8660,10666,10866,12034,14112,14452,15808,19846,20543,21470,22673,23416,23686,24844,25361,26381,27990,29376,29600,31674,32254,32723,33928,34483,35640,38571,39678,40324,42036,43758,43983,44634,45745,46891,48147,48621,49113,49970,50137,50636,51185,51690,56234,59318,61707,63226,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	186311824	186311928	chr1:186311824-186311928	3	-	186311824	186311824	8553170	1	104,	0,
#Partially deleted in new
chr1	186318504	186322701	chr1:186318504-186322701	0	-	186318504	186318504	8553170	5	99,96,107,95,184,	0,228,1807,3813,4013,
#Deleted in new
chr1	186325518	186326220	chr1:186325518-186326220	0	-	186325518	186325518	8553170	2	336,117,	0,585,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	186338186	186344090	chr1:186338186-186344090	0	-	186338186	186338186	8553170	5	57,131,132,2222,185,	0,1455,2841,3065,5719,
#Partially deleted in new
chr1	186351422	186356538	chr1:186351422-186356538	0	-	186351422	186351422	8553170	6	48,135,163,149,134,253,	0,553,2265,3987,4212,4863,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	186351951	186353948	chr1:186351951-186353948	0	-	186351951	186351951	8553170	2	159,261,	0,1736,
#Partially deleted in new
chr1	186352014	186375325	chr1:186352014-186375325	0	-	186352014	186352014	8553170	19	96,193,149,134,164,227,108,198,92,141,88,81,93,165,104,97,74,105,448,	0,1673,3395,3620,4271,5382,6528,7784,8258,8750,9607,9774,10273,10822,11327,15871,18955,21344,22863,
#Partially deleted in new
chr1	186353870	186375325	chr1:186353870-186375325	1	-	186353870	186375028	0	18	10,149,134,164,227,108,198,92,141,88,81,93,165,104,97,74,105,448,	0,1539,1764,2415,3526,4672,5928,6402,6894,7751,7918,8417,8966,9471,14015,17099,19488,21007,
#Deleted in new
chr1	186373392	186375693	chr1:186373392-186375693	0	-	186373392	186375628	789624	3	71,309,135,	0,1485,2166,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	186375837	186421378	chr1:186375837-186421378	1	+	186379785	186419076	789624	13	137,118,135,96,107,37,141,96,129,91,186,111,2370,	0,3929,7184,10150,12604,13750,14873,15858,22475,23116,30245,41706,43171,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	186375837	186419551	chr1:186375837-186419551	1	+	186379785	186419076	789624	13	137,118,135,107,37,141,96,69,129,91,186,111,543,	0,3929,7184,12604,13750,14873,15858,18109,22475,23116,30245,41706,43171,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	186375868	186421378	chr1:186375868-186421378	3	+	186379785	186419076	789624	14	106,118,135,96,107,37,141,96,69,129,91,186,111,2370,	0,3898,7153,10119,12573,13719,14842,15827,18078,22444,23085,30214,41675,43140,
#Partially deleted in new
chr1	186398419	186411893	chr1:186398419-186411893	0	+	186398419	186398419	8553170	4	22,91,186,83,	0,534,7663,13391,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	186400571	186401455	chr1:186400571-186401455	3	+	186401045	186401180	789624	1	884,	0,
#Partially deleted in new
chr1	186417376	186419233	chr1:186417376-186419233	0	+	186417376	186417376	8553170	2	278,225,	0,1632,
#Partially deleted in new
chr1	186435160	186470291	chr1:186435160-186470291	3	+	186435160	186435160	789624	5	129,216,96,80,21,	0,1197,16018,31127,35110,
#Partially deleted in new
chr1	186443565	186461122	chr1:186443565-186461122	3	-	186443978	186449459	789624	4	941,152,85,64,	0,2860,5833,17493,
#Partially deleted in new
chr1	186443581	186448724	chr1:186443581-186448724	1	-	186443978	186446482	789624	3	925,152,97,	0,2844,5046,
#Deleted in new
chr1	186451080	186451749	chr1:186451080-186451749	1	+	186451080	186451080	8553170	2	194,120,	0,549,
#Deleted in new
chr1	186521772	186522304	chr1:186521772-186522304	3	+	186521772	186521772	8553170	1	532,	0,
#Deleted in new
chr1	186578278	186579299	chr1:186578278-186579299	7	+	186578278	186578278	16724991	1	1021,	0,
#Deleted in new
chr1	186580514	186581191	chr1:186580514-186581191	7	-	186580514	186580514	16724991	1	677,	0,
#Partially deleted in new
chr1	186671790	186680427	chr1:186671790-186680427	3	-	186674352	186680290	0	10	2972,148,287,247,84,182,144,144,117,189,	0,3458,4107,4676,5042,5858,6470,7267,7531,8448,
#Partially deleted in new
chr1	186672892	186680423	chr1:186672892-186680423	0	-	186672892	186672892	8553170	9	1870,148,816,84,182,144,144,117,185,	0,2356,3005,3940,4756,5368,6165,6429,7346,
#Partially deleted in new
chr1	186674352	186680290	chr1:186674352-186680290	0	-	186677685	186680290	789624	10	410,148,287,247,84,72,144,144,117,52,	0,896,1545,2114,2480,3296,3908,4705,4969,5886,
#Partially deleted in new
chr1	186674495	186675869	chr1:186674495-186675869	0	-	186674495	186674495	8553170	2	267,621,	0,753,
#Partially deleted in new
chr1	186678269	186680423	chr1:186678269-186680423	0	-	186678269	186678269	8553170	4	131,144,117,185,	0,788,1052,1969,
#Partially deleted in new
chr1	186680621	186681446	chr1:186680621-186681446	3	+	186680621	186680621	789624	1	825,	0,
#Partially deleted in new
chr1	186828952	186988981	chr1:186828952-186988981	3	+	186854354	186988508	0	18	83,102,82,149,114,38,142,137,223,115,138,93,72,243,185,196,158,605,	0,25333,41482,64058,65145,78012,82295,103810,110055,111027,117684,117916,121704,127149,136456,148640,150362,159424,
#Partially deleted in new
chr1	186854285	186939230	chr1:186854285-186939230	0	+	186854285	186854285	8553170	7	102,82,149,114,38,142,223,	0,16149,38725,39812,52679,56962,84722,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	187070699	187686130	chr1:187070699-187686130	3	+	187070699	187070699	8553170	9	206,597,103,70,93,99,64,91,430,	0,1728,256221,258291,347211,372928,500433,604652,615001,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	187072512	187480614	chr1:187072512-187480614	1	+	187072512	187072512	8553170	5	512,122,70,99,325,	0,20312,256478,371115,407777,
#Partially deleted in new
chr1	187092841	187360323	chr1:187092841-187360323	0	+	187092841	187092841	789624	4	105,74,70,609,	0,210624,236149,266873,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	187228586	187330505	chr1:187228586-187330505	1	+	187228586	187228586	8553170	8	32,168,150,113,74,103,70,167,	0,25789,26386,40809,74879,98334,100404,101752,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	187261508	187487191	chr1:187261508-187487191	0	+	187261508	187261508	8553170	4	102,113,99,2769,	0,7887,182119,222914,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	187307393	187487248	chr1:187307393-187487248	1	+	187307393	187307393	8553170	5	125,103,70,99,2826,	0,19527,21597,136234,177029,
#Deleted in new
chr1	187506837	187507119	chr1:187506837-187507119	7	-	187506837	187506837	16724991	2	146,114,	0,168,
#Deleted in new
chr1	187563060	187564131	chr1:187563060-187564131	7	+	187563060	187563060	16724991	1	1071,	0,
#Partially deleted in new
chr1	187632165	187632439	chr1:187632165-187632439	7	+	187632165	187632165	16724991	1	274,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	187641225	187643860	chr1:187641225-187643860	1	+	187641225	187641225	8553170	3	44,106,2243,	0,150,392,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	187641284	187686622	chr1:187641284-187686622	1	+	187641284	187641284	8553170	3	197,197,919,	0,333,44419,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	187641615	187643849	chr1:187641615-187643849	0	+	187641615	187641615	8553170	1	2234,	0,
#Partially deleted in new
chr1	187706560	187708898	chr1:187706560-187708898	7	+	187706560	187706560	16724991	3	137,1065,57,	0,423,2281,
#Deleted in new
chr1	187714242	187714735	chr1:187714242-187714735	7	-	187714242	187714242	16724991	1	493,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	188013641	188144763	chr1:188013641-188144763	3	+	188013641	188013641	8553170	4	358,96,80,867,	0,29250,83497,130255,
#Deleted in new
chr1	188067297	188067525	chr1:188067297-188067525	7	-	188067297	188067297	16724991	1	228,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	188155838	188156180	chr1:188155838-188156180	3	-	188155838	188155838	8553170	1	342,	0,
#Deleted in new
chr1	188218399	188220676	chr1:188218399-188220676	3	+	188218399	188218399	8553170	1	2277,	0,
#Deleted in new
chr1	188242138	188242678	chr1:188242138-188242678	7	-	188242138	188242138	16724991	1	540,	0,
#Partially deleted in new
chr1	188508537	188536465	chr1:188508537-188536465	3	+	188508537	188508537	8553170	4	128,182,103,333,	0,20658,27218,27595,
#Deleted in new
chr1	188671352	188671759	chr1:188671352-188671759	7	+	188671352	188671352	16724991	1	407,	0,
#Deleted in new
chr1	188694319	188695111	chr1:188694319-188695111	7	+	188694319	188694319	16724991	1	792,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	188705622	188710880	chr1:188705622-188710880	3	-	188705622	188705622	8553170	2	663,70,	0,5188,
#Partially deleted in new
chr1	188869476	188887434	chr1:188869476-188887434	0	-	188869476	188869476	8553170	2	272,194,	0,17764,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	188869481	188888540	chr1:188869481-188888540	3	-	188869481	188869481	8553170	3	267,370,147,	0,1655,18912,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	188905687	189037262	chr1:188905687-189037262	3	+	188905687	188905687	8553170	2	239,545,	0,131030,
#Partially deleted in new
chr1	189035960	189036444	chr1:189035960-189036444	7	-	189035960	189035960	16724991	1	484,	0,
#Partially deleted in new
chr1	189132349	189133292	chr1:189132349-189133292	7	-	189132349	189132349	16724991	1	943,	0,
#Deleted in new
chr1	189666148	189666256	chr1:189666148-189666256	7	-	189666148	189666148	16724991	1	108,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	189775464	189814918	chr1:189775464-189814918	3	+	189775464	189775464	8553170	4	101,78,185,87,	0,1795,16114,39367,
#Partially deleted in new
chr1	189868000	189868528	chr1:189868000-189868528	3	-	189868000	189868000	8553170	2	212,202,	0,326,
#Deleted in new
chr1	189989569	189993097	chr1:189989569-189993097	7	-	189989569	189989569	16724991	1	3528,	0,
#Partially deleted in new
chr1	190097661	190477882	chr1:190097661-190477882	3	-	190098017	190454890	789624	8	1473,223,237,106,191,191,286,435,	0,63006,128420,136710,167203,183898,356993,379786,
#Partially deleted in new
chr1	190216951	190226196	chr1:190216951-190226196	0	-	190216951	190216951	8553170	2	123,115,	0,9130,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	190264897	190362270	chr1:190264897-190362270	3	+	190264897	190264897	8553170	5	142,89,104,59,208,	0,37805,77531,77799,97165,
#Partially deleted in new
chr1	190265008	190475984	chr1:190265008-190475984	0	-	190265008	190454890	789624	4	47,191,286,205,	0,16551,189646,210771,
#Partially deleted in new
chr1	190454806	190474801	chr1:190454806-190474801	0	-	190454806	190454890	789624	2	134,394,	0,19601,
#Deleted in new
chr1	190477425	190478404	chr1:190477425-190478404	0	-	190477425	190477425	8553170	2	156,401,	0,578,
#Deleted in new
chr1	190478550	190480735	chr1:190478550-190480735	0	+	190478550	190478550	789624	2	81,391,	0,1794,
#Deleted in new
chr1	190479005	190480735	chr1:190479005-190480735	3	+	190479005	190479005	8553170	2	135,391,	0,1339,
#Partially deleted in new
chr1	190480378	190494297	chr1:190480378-190494297	3	+	190480378	190480378	8553170	2	46,460,	0,13459,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	190624889	190801658	chr1:190624889-190801658	3	+	190624889	190624889	789624	5	144,73,50,91,1858,	0,113548,166624,168616,174911,
#Deleted in new
chr1	190781786	190781995	chr1:190781786-190781995	7	+	190781786	190781786	16724991	1	209,	0,
#Deleted in new
chr1	190797523	190797956	chr1:190797523-190797956	7	+	190797523	190797523	16724991	1	433,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	190878144	191151410	chr1:190878144-191151410	3	-	190878144	190878144	8553170	6	1703,106,158,109,161,201,	0,98275,99024,166834,216288,273065,
#Deleted in new
chr1	191146024	191146961	chr1:191146024-191146961	7	-	191146024	191146024	16724991	1	937,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	191151509	191154634	chr1:191151509-191154634	3	+	191151509	191151509	8553170	1	3125,	0,
#Deleted in new
chr1	191179520	191179739	chr1:191179520-191179739	7	-	191179520	191179520	16724991	1	219,	0,
#Partially deleted in new
chr1	191221158	191228467	chr1:191221158-191228467	3	-	191221158	191221158	8553170	2	154,145,	0,7164,
#Partially deleted in new
chr1	191858706	191866960	chr1:191858706-191866960	3	-	191858706	191858706	8553170	2	474,141,	0,8113,
#Partially deleted in new
chr1	191858762	191890229	chr1:191858762-191890229	0	-	191858762	191858762	8553170	2	418,165,	0,31302,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	191875494	192011260	chr1:191875494-192011260	3	+	191875494	191875494	8553170	6	206,96,92,114,121,1422,	0,88899,89827,100476,101744,134344,
#Partially deleted in new
chr1	192158456	192185815	chr1:192158456-192185815	3	+	192158637	192184554	0	5	300,102,62,167,1519,	0,763,1921,22835,25840,
#Partially deleted in new
chr1	192158484	192163656	chr1:192158484-192163656	0	+	192158484	192158484	8553170	6	42,126,102,62,35,377,	0,146,735,1893,2968,4795,
#Partially deleted in new
chr1	192158513	192181454	chr1:192158513-192181454	0	+	192158513	192158513	8553170	5	243,102,62,35,163,	0,706,1864,2939,22778,
#Deleted in new
chr1	192158675	192160683	chr1:192158675-192160683	0	+	192158675	192158675	8553170	3	81,102,306,	0,544,1702,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	192167785	192392914	chr1:192167785-192392914	1	-	192167785	192167785	8553170	8	2006,153,96,33,29,78,183,122,	0,16567,32776,33194,70732,71927,219846,225007,
#Partially deleted in new
chr1	192246707	192247487	chr1:192246707-192247487	7	-	192246707	192246707	16724991	1	780,	0,
#Partially deleted in new
chr1	192247504	192247947	chr1:192247504-192247947	7	+	192247504	192247504	16724991	1	443,	0,
#Partially deleted in new
chr1	192316991	192367285	chr1:192316991-192367285	3	+	192343036	192366124	789624	5	114,71,77,167,1365,	0,25985,30321,35055,48929,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	192387631	192629085	chr1:192387631-192629085	1	-	192387631	192387631	8553170	8	183,140,149,161,70,59,81,199,	0,88407,102165,104177,179515,205967,239709,241255,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	192491451	192925715	chr1:192491451-192925715	3	-	192491451	192491451	8553170	7	518,70,58,59,148,156,104,	0,75695,77795,102147,273356,274587,434160,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	192516942	192739495	chr1:192516942-192739495	0	-	192516942	192516942	8553170	5	1021,70,59,81,105,	0,50204,76656,110398,222448,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	192517189	192538102	chr1:192517189-192538102	3	+	192517189	192517189	8553170	3	717,198,349,	0,13117,20564,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	192517636	192925804	chr1:192517636-192925804	0	-	192517636	192517636	8553170	6	327,70,59,148,156,193,	0,49510,75962,247171,248402,407975,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	192517638	192739443	chr1:192517638-192739443	0	-	192517638	192517638	8553170	4	325,70,59,53,	0,49508,75960,221752,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	192529578	192538102	chr1:192529578-192538102	0	+	192529578	192529578	8553170	3	137,198,349,	0,728,8175,
#Deleted in new
chr1	192575726	192580031	chr1:192575726-192580031	3	+	192575792	192579322	0	5	203,81,62,164,895,	0,558,1047,2495,3410,
#Deleted in new
chr1	192575762	192577276	chr1:192575762-192577276	0	+	192575762	192575762	8553170	2	167,503,	0,1011,
#Deleted in new
chr1	192575772	192576766	chr1:192575772-192576766	0	+	192575772	192575772	8553170	2	157,482,	0,512,
#Deleted in new
chr1	192575772	192578955	chr1:192575772-192578955	1	+	192575792	192578451	0	4	157,81,62,734,	0,512,1001,2449,
#Deleted in new
chr1	192575772	192576824	chr1:192575772-192576824	0	+	192575772	192575772	8553170	2	593,51,	0,1001,
#Deleted in new
chr1	192575774	192579941	chr1:192575774-192579941	0	+	192575774	192575774	8553170	4	155,81,1612,805,	0,510,999,3362,
#Partially deleted in new
chr1	192636137	192660306	chr1:192636137-192660306	3	+	192644334	192659523	789624	6	180,71,69,62,167,969,	0,1452,8193,11788,22063,23200,
#Partially deleted in new
chr1	192636144	192660260	chr1:192636144-192660260	1	+	192644334	192659523	789624	7	173,71,40,69,62,167,923,	0,1445,2019,8186,11781,22056,23193,
#Partially deleted in new
chr1	192636144	192660260	chr1:192636144-192660260	0	+	192636144	192636144	8553170	6	173,71,69,62,167,923,	0,1445,8186,11781,22056,23193,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	192644530	192659862	chr1:192644530-192659862	0	+	192644530	192644530	8553170	2	3457,1662,	0,13670,
#Partially deleted in new
chr1	192716131	192716653	chr1:192716131-192716653	3	+	192716182	192716653	789624	1	522,	0,
#Partially deleted in new
chr1	192716182	192716650	chr1:192716182-192716650	1	+	192716182	192716650	789624	1	468,	0,
#Partially deleted in new
chr1	192716327	192716390	chr1:192716327-192716390	3	+	192716327	192716327	5263520	1	63,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	192725880	192925752	chr1:192725880-192925752	1	-	192725880	192725880	8553170	6	958,148,156,170,58,141,	0,38927,40158,66418,101023,199731,
#Deleted in new
chr1	192796532	192797205	chr1:192796532-192797205	7	+	192796532	192796532	16724991	2	211,167,	0,506,
#Deleted in new
chr1	192800570	192801141	chr1:192800570-192801141	7	+	192800570	192800570	16724991	1	571,	0,
#Deleted in new
chr1	192809038	192810899	chr1:192809038-192810899	0	+	192809038	192809038	8553170	2	143,734,	0,1127,
#Deleted in new
chr1	192809040	192812283	chr1:192809040-192812283	3	+	192809071	192811596	0	5	141,102,62,167,882,	0,1125,1329,1940,2361,
#Deleted in new
chr1	192809041	192811239	chr1:192809041-192811239	0	+	192809041	192809041	8553170	3	140,266,259,	0,1124,1939,
#Deleted in new
chr1	192809142	192811032	chr1:192809142-192811032	0	+	192809142	192809142	8553170	5	39,78,102,62,52,	0,315,1023,1227,1838,
#Partially deleted in new
chr1	192835404	192955037	chr1:192835404-192955037	1	-	192835404	192835404	8553170	7	334,200,95,235,76,171,48,	0,2582,32093,37647,111908,112698,119585,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	192875685	192875985	chr1:192875685-192875985	3	-	192875685	192875685	8553170	1	300,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	192910952	192925715	chr1:192910952-192925715	0	-	192910952	192910952	8553170	2	529,104,	0,14659,
#Partially deleted in new
chr1	192935738	192955045	chr1:192935738-192955045	1	-	192935738	192935738	8553170	6	165,120,185,58,174,56,	0,1562,6566,11574,12364,19251,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	192935795	192957713	chr1:192935795-192957713	0	-	192935795	192935795	8553170	2	108,410,	0,21508,
#Partially deleted in new
chr1	192937299	192948257	chr1:192937299-192948257	0	-	192937299	192937299	8553170	2	121,155,	0,10803,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	192993448	192994677	chr1:192993448-192994677	7	-	192993448	192993448	16724991	1	1229,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	193012249	193059496	chr1:193012249-193059496	3	-	193016350	193059260	0	11	4146,99,114,103,64,131,62,126,106,64,312,	0,8847,10676,11594,15835,16929,17138,17282,37496,39504,46935,
#Partially deleted in new
chr1	193015758	193059496	chr1:193015758-193059496	1	-	193016350	193059260	0	11	637,99,111,103,64,131,62,126,106,64,312,	0,5338,7167,8085,12326,13420,13629,13773,33987,35995,43426,
#Partially deleted in new
chr1	193015758	193029575	chr1:193015758-193029575	0	-	193020342	193029575	789624	9	637,75,99,114,103,64,131,62,44,	0,4548,5338,7167,8085,12326,13420,13629,13773,
#Partially deleted in new
chr1	193015993	193023940	chr1:193015993-193023940	0	-	193020342	193023940	789624	5	402,75,99,111,97,	0,4313,5103,6932,7850,
#Partially deleted in new
chr1	193018404	193059361	chr1:193018404-193059361	1	-	193020342	193059260	0	12	416,75,99,111,103,64,131,62,126,106,64,177,	0,1902,2692,4521,5439,9680,10774,10983,11127,31341,33349,40780,
#Partially deleted in new
chr1	193018404	193059409	chr1:193018404-193059409	1	-	193018811	193059260	0	11	416,99,111,103,64,131,62,126,106,64,225,	0,2692,4521,5439,9680,10774,10983,11127,31341,33349,40780,
#Partially deleted in new
chr1	193018621	193029309	chr1:193018621-193029309	0	-	193020342	193029309	789624	7	199,75,99,114,103,64,131,	0,1685,2475,4304,5222,9463,10557,
#Partially deleted in new
chr1	193020334	193023922	chr1:193020334-193023922	0	-	193020447	193023922	789624	4	122,99,111,79,	0,762,2591,3509,
#Partially deleted in new
chr1	193022967	193059521	chr1:193022967-193059521	0	-	193022967	193059461	789624	9	69,103,64,131,62,126,106,64,109,	0,876,5117,6211,6420,6564,26778,28786,36445,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	193049531	193059217	chr1:193049531-193059217	0	-	193049531	193049531	8553170	3	320,64,33,	0,2222,9653,
#Partially deleted in new
chr1	193051791	193060080	chr1:193051791-193060080	0	-	193051791	193059998	789624	3	26,103,448,	0,7621,7841,
#Deleted in new
chr1	193057280	193057415	chr1:193057280-193057415	3	-	193057280	193057280	789624	1	135,	0,
#Partially deleted in new
chr1	193059421	193084881	chr1:193059421-193084881	1	+	193069054	193084731	789624	9	355,601,221,147,138,117,114,147,303,	0,9612,16398,17079,17491,21942,22764,23140,25157,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	193059453	193091219	chr1:193059453-193091219	1	+	193076524	193084731	789624	8	323,221,147,138,117,114,147,6641,	0,16366,17047,17459,21910,22732,23108,25125,
#Deleted in new
chr1	193059594	193060283	chr1:193059594-193060283	0	+	193059594	193059594	8553170	2	182,410,	0,279,
#Partially deleted in new
chr1	193059618	193075890	chr1:193059618-193075890	0	+	193069054	193075890	789624	3	158,148,71,	0,9415,16201,
#Partially deleted in new
chr1	193059622	193085235	chr1:193059622-193085235	0	+	193059622	193059622	8553170	7	154,147,138,117,114,147,657,	0,16878,17290,21741,22563,22939,24956,
#Partially deleted in new
chr1	193059658	193069179	chr1:193059658-193069179	0	+	193069054	193069179	789624	3	118,349,146,	0,215,9375,
#Partially deleted in new
chr1	193060033	193085985	chr1:193060033-193085985	3	+	193069054	193084731	789624	9	189,601,221,147,138,117,114,147,1407,	0,9000,15786,16467,16879,21330,22152,22528,24545,
#Partially deleted in new
chr1	193060056	193091777	chr1:193060056-193091777	1	+	193069054	193085002	789624	11	166,601,221,147,138,117,114,147,79,52,127,	0,8977,15763,16444,16856,21307,22129,22505,24522,24932,31594,
#Partially deleted in new
chr1	193060056	193091777	chr1:193060056-193091777	1	+	193069054	193091685	789624	10	166,601,221,147,138,117,114,147,79,127,	0,8977,15763,16444,16856,21307,22129,22505,24522,31594,
#Partially deleted in new
chr1	193060056	193091777	chr1:193060056-193091777	1	+	193069054	193091671	789624	10	166,601,221,147,138,117,114,147,120,127,	0,8977,15763,16444,16856,21307,22129,22505,24522,31594,
#Partially deleted in new
chr1	193069015	193084866	chr1:193069015-193084866	1	+	193069054	193084731	789624	8	619,221,147,138,117,114,147,288,	0,6804,7485,7897,12348,13170,13546,15563,
#Partially deleted in new
chr1	193069231	193075931	chr1:193069231-193075931	0	+	193069231	193075931	789624	3	403,66,112,	0,1322,6588,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	193090865	193105433	chr1:193090865-193105433	0	-	193096624	193105382	0	5	4384,817,177,64,170,	0,5077,6718,10275,14398,
#Partially deleted in new
chr1	193096467	193105431	chr1:193096467-193105431	1	-	193096624	193105382	0	4	292,177,64,168,	0,1116,4673,8796,
#Partially deleted in new
chr1	193096467	193106114	chr1:193096467-193106114	3	-	193096624	193105638	0	4	292,177,64,598,	0,1116,4673,9049,
#Partially deleted in new
chr1	193096666	193106057	chr1:193096666-193106057	0	-	193096666	193096666	8553170	4	93,177,64,440,	0,917,4474,8951,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	193121799	193254815	chr1:193121799-193254815	3	+	193122200	193250712	8553170	17	532,106,70,63,53,89,217,99,79,65,58,36,88,162,101,142,4140,	0,3312,8374,13591,13737,16285,20050,26067,28504,30580,81995,90265,90590,111193,114456,127930,128876,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	193121957	193254815	chr1:193121957-193254815	1	+	193122200	193250712	0	17	374,106,70,63,53,89,217,99,79,65,58,36,88,162,101,142,4140,	0,3154,8216,13433,13579,16127,19892,25909,28346,30422,81837,90107,90432,111035,114298,127772,128718,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	193121982	193237693	chr1:193121982-193237693	0	+	193121982	193121982	8553170	16	349,106,70,63,53,89,217,99,79,65,58,36,88,162,101,729,	0,3129,8191,13408,13554,16102,19867,25884,28321,30397,81812,90082,90407,111010,114273,114982,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	193121996	193253326	chr1:193121996-193253326	0	+	193122200	193212413	789624	18	335,106,70,63,53,89,217,99,79,65,68,58,36,88,162,101,142,2651,	0,3115,8177,13394,13540,16088,19853,25870,28307,30383,39126,81798,90068,90393,110996,114259,127733,128679,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	193122102	193251083	chr1:193122102-193251083	0	+	193122200	193237739	8553170	18	229,106,70,63,53,89,217,99,79,65,58,36,88,162,101,147,142,408,	0,3009,8071,13288,13434,15982,19747,25764,28201,30277,81692,89962,90287,110890,114153,115605,127627,128573,
#Partially deleted in new
chr1	193122122	193150381	chr1:193122122-193150381	0	+	193122200	193141861	789624	10	209,106,70,63,53,89,70,217,99,78,	0,2989,8051,13268,13414,15962,18950,19727,25744,28181,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	193122178	193250905	chr1:193122178-193250905	0	+	193122200	193127925	8553170	18	153,106,291,70,63,53,89,217,99,79,65,58,36,88,162,101,142,230,	0,2933,5669,7995,13212,13358,15906,19671,25688,28125,30201,81616,89886,90211,110814,114077,127551,128497,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	193122179	193253325	chr1:193122179-193253325	1	+	193122200	193250712	789624	14	152,106,70,63,53,89,217,58,36,88,162,101,142,2650,	0,2932,7994,13211,13357,15905,19670,81615,89885,90210,110813,114076,127550,128496,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	193122187	193159546	chr1:193122187-193159546	0	+	193122187	193122187	8553170	11	144,106,70,63,53,89,217,99,79,65,2712,	0,2924,7986,13203,13349,15897,19662,25679,28116,30192,34647,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	193122299	193153186	chr1:193122299-193153186	0	+	193122299	193122299	8553170	11	32,106,70,63,53,89,217,99,79,65,219,	0,2812,7874,13091,13237,15785,19550,25567,28004,30080,30668,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	193122469	193138173	chr1:193122469-193138173	0	+	193122469	193122469	8553170	7	92,106,291,70,63,53,89,	0,2642,5378,7704,12921,13067,15615,
#Partially deleted in new
chr1	193122534	193141955	chr1:193122534-193141955	0	+	193122534	193122534	8553170	7	72,106,70,63,53,89,106,	0,2577,7639,12856,13002,15550,19315,
#Deleted in new
chr1	193136502	193136583	chr1:193136502-193136583	3	+	193136502	193136502	5263520	1	81,	0,
#Deleted in new
chr1	193179044	193186654	chr1:193179044-193186654	3	-	193180293	193181562	789624	2	2638,636,	0,6974,
#Partially deleted in new
chr1	193186490	193251191	chr1:193186490-193251191	0	+	193186490	193186490	8553170	8	222,58,36,88,162,101,142,516,	0,17304,25574,25899,46502,49765,63239,64185,
#Partially deleted in new
chr1	193233025	193251168	chr1:193233025-193251168	0	+	193233025	193233025	8553170	3	129,142,493,	0,16704,17650,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	193236793	193237107	chr1:193236793-193237107	3	-	193236793	193236793	8553170	1	314,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	193304744	193365953	chr1:193304744-193365953	3	+	193304744	193304744	789624	4	194,143,136,306,	0,44388,46359,60903,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	193678893	193727035	chr1:193678893-193727035	3	+	193678893	193678893	8553170	3	112,85,204,	0,46707,47938,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	193684245	193688429	chr1:193684245-193688429	3	-	193684245	193684245	8553170	3	466,210,174,	0,1334,4010,
#Deleted in new
chr1	193756814	193757267	chr1:193756814-193757267	7	-	193756814	193756814	16724991	1	453,	0,
#Partially deleted in new
chr1	194149472	194198694	chr1:194149472-194198694	3	+	194149472	194149472	8553170	3	384,64,384,	0,48050,48838,
#Partially deleted in new
chr1	194188966	194190342	chr1:194188966-194190342	7	+	194188966	194188966	16724991	1	1376,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	194350942	194352426	chr1:194350942-194352426	3	+	194350942	194350942	8553170	2	296,144,	0,1340,
#Deleted in new
chr1	194488102	194488205	chr1:194488102-194488205	3	-	194488102	194488102	8553170	1	103,	0,
#Deleted in new
chr1	194718794	194719236	chr1:194718794-194719236	7	+	194718794	194718794	16724991	1	442,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	194785516	194931310	chr1:194785516-194931310	3	-	194785516	194785516	8553170	4	142,188,69,181,	0,106165,134942,145613,
#Partially deleted in new
chr1	196044995	196061073	chr1:196044995-196061073	3	-	196044995	196044995	8553170	2	544,77,	0,16001,
#Partially deleted in new
chr1	196225778	196608411	chr1:196225778-196608411	1	-	196228223	196608309	789624	27	2557,85,301,129,84,102,112,135,173,106,214,230,150,109,109,64,137,165,181,95,84,75,60,49,100,80,197,	0,10207,32415,55081,56494,59878,79455,90113,100938,105377,108068,114562,116300,147361,172784,197271,200073,202326,203798,239514,241924,243215,253400,256552,264059,266483,382436,
#Partially deleted in new
chr1	196225782	196465387	chr1:196225782-196465387	0	-	196225782	196225782	8553170	20	2553,85,301,129,84,102,112,135,96,106,214,230,150,109,109,64,137,165,181,95,	0,10203,32411,55077,56490,59874,79451,90109,91391,105373,108064,114558,116296,147357,172780,197267,200069,202322,203794,239510,
#Partially deleted in new
chr1	196225806	196608495	chr1:196225806-196608495	0	-	196317229	196608309	8553170	30	2529,85,301,38,21,129,84,102,112,135,96,173,106,214,230,150,109,109,64,137,165,181,95,84,75,60,49,100,80,281,	0,10179,32387,33780,47661,55053,56466,59850,79427,90085,91367,100910,105349,108040,114534,116272,147333,172756,197243,200045,202298,203770,239486,241896,243187,253372,256524,264031,266455,382408,
#Partially deleted in new
chr1	196227858	196608359	chr1:196227858-196608359	1	-	196316017	196465310	789624	24	477,85,301,38,21,129,84,102,130,173,106,214,230,150,109,109,95,84,75,60,49,100,80,145,	0,8127,30335,31728,45609,53001,54414,57798,88033,98858,103297,105988,112482,114220,145281,170704,237434,239844,241135,251320,254472,261979,264403,380356,
#Partially deleted in new
chr1	196227858	196608359	chr1:196227858-196608359	1	-	196228223	196608309	789624	27	477,85,301,21,129,84,102,112,135,173,106,214,230,109,109,64,137,165,181,95,84,75,60,49,100,80,145,	0,8127,30335,45609,53001,54414,57798,77375,88033,98858,103297,105988,112482,145281,170704,195191,197993,200246,201718,237434,239844,241135,251320,254472,261979,264403,380356,
#Partially deleted in new
chr1	196228138	196609225	chr1:196228138-196609225	3	-	196228223	196608309	789624	28	197,85,301,129,84,102,112,135,72,173,106,214,230,150,109,109,64,137,165,181,95,84,75,60,49,100,80,1011,	0,7847,30055,52721,54134,57518,77095,87753,91345,98578,103017,105708,112202,113940,145001,170424,194911,197713,199966,201438,237154,239564,240855,251040,254192,261699,264123,380076,
#Partially deleted in new
chr1	196258088	196608560	chr1:196258088-196608560	0	-	196258088	196258088	8553170	25	406,21,129,84,102,112,135,173,106,214,230,171,109,109,64,137,165,181,95,84,60,49,100,80,346,	0,15379,22771,24184,27568,47145,57803,68628,73067,75758,82252,83990,115051,140474,164961,167763,170016,171488,207204,209614,221090,224242,231749,234173,350126,
#Deleted in new
chr1	196582412	196582481	chr1:196582412-196582481	3	-	196582412	196582412	5263520	1	69,	0,
#Partially deleted in new
chr1	196651877	196747504	chr1:196651877-196747504	3	+	196652117	196747313	789624	22	298,186,106,77,192,171,174,195,177,183,177,177,183,180,177,183,186,174,177,177,183,394,	0,21100,21979,24111,25598,27745,33186,37542,38185,61857,63715,73243,74592,74883,76468,84946,85597,88741,89997,91574,93939,95233,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	196652044	196701566	chr1:196652044-196701566	1	+	196652117	196701331	789624	10	131,186,106,77,192,171,174,195,177,249,	0,20933,21812,23944,25431,27578,33019,37375,38018,49273,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	196652055	196701565	chr1:196652055-196701565	1	+	196652117	196701331	789624	9	120,186,106,77,171,174,195,177,248,	0,20922,21801,23933,27567,33008,37364,38007,49262,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	196652055	196673407	chr1:196652055-196673407	0	+	196652055	196652055	8553170	2	120,430,	0,20922,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	196676987	196747504	chr1:196676987-196747504	0	+	196676987	196676987	8553170	16	2806,174,195,177,183,177,177,183,180,177,183,186,1433,177,183,394,	0,8076,12432,13075,36747,38605,48133,49482,49773,51358,59836,60487,63631,66464,68829,70123,
#Partially deleted in new
chr1	196736907	196741086	chr1:196736907-196741086	0	+	196736907	196736907	8553170	3	99,186,468,	0,567,3711,
#Partially deleted in new
chr1	196774794	196794073	chr1:196774794-196794073	3	+	196774886	196793513	789624	6	150,195,177,183,183,757,	0,4367,5002,13421,15250,18522,
#Partially deleted in new
chr1	196774812	196793488	chr1:196774812-196793488	0	+	196774886	196788830	789624	7	132,195,177,183,200,183,172,	0,4349,4984,13403,13932,15232,18504,
#Partially deleted in new
chr1	196774812	196790022	chr1:196774812-196790022	1	+	196774886	196788830	789624	5	132,195,177,183,1278,	0,4349,4984,13403,13932,
#Partially deleted in new
chr1	196774815	196793675	chr1:196774815-196793675	1	+	196774886	196793513	789624	5	129,195,177,183,359,	0,4346,4981,15229,18501,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	196774815	196795406	chr1:196774815-196795406	1	+	196774886	196794603	789624	5	129,195,177,132,829,	0,4346,4981,13400,19762,
#Partially deleted in new
chr1	196789759	196793633	chr1:196789759-196793633	0	+	196789759	196789759	8553170	2	468,317,	0,3557,
#Partially deleted in new
chr1	196819756	196832189	chr1:196819756-196832189	3	+	196819844	196831999	0	6	146,195,177,177,183,393,	0,5720,7072,8313,10743,12040,
#Partially deleted in new
chr1	196819780	196832189	chr1:196819780-196832189	1	+	196819844	196831999	789624	5	122,195,177,183,393,	0,5696,7048,10719,12016,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	196819821	196821202	chr1:196819821-196821202	0	+	196819821	196819821	8553170	2	81,318,	0,1063,
#Partially deleted in new
chr1	196819864	196826026	chr1:196819864-196826026	0	+	196819864	196819864	8553170	2	38,550,	0,5612,
#Partially deleted in new
chr1	196825223	196828167	chr1:196825223-196828167	0	+	196825223	196825223	8553170	3	448,177,98,	0,1605,2846,
#Partially deleted in new
chr1	196850282	196884793	chr1:196850282-196884793	7	+	196850282	196850282	16724991	4	58,195,173,188,	0,7321,7949,34323,
#Partially deleted in new
chr1	196888013	196918713	chr1:196888013-196918713	3	+	196888150	196918406	789624	10	195,195,183,177,183,198,183,177,183,504,	0,14407,17094,18847,19302,22267,24726,26481,26942,30196,
#Partially deleted in new
chr1	196888051	196918633	chr1:196888051-196918633	1	+	196888150	196918406	789624	10	157,198,183,177,183,198,183,177,183,424,	0,14366,17056,18809,19264,22229,24688,26443,26904,30158,
#Partially deleted in new
chr1	196888081	196918633	chr1:196888081-196918633	1	+	196888150	196918406	789624	6	127,198,183,177,183,424,	0,14336,24658,26413,26874,30128,
#Partially deleted in new
chr1	196888102	196918428	chr1:196888102-196918428	1	+	196888150	196918406	789624	7	106,87,111,183,177,183,219,	0,14315,22265,24637,26392,26853,30107,
#Partially deleted in new
chr1	196914749	196916630	chr1:196914749-196916630	0	+	196914749	196914749	8553170	2	389,89,	0,1792,
#Partially deleted in new
chr1	196943767	196959226	chr1:196943767-196959226	3	+	196943880	196959080	0	5	171,195,177,183,346,	0,5687,7084,14123,15113,
#Partially deleted in new
chr1	196943771	196959226	chr1:196943771-196959226	1	+	196943880	196959080	789624	5	167,195,129,183,346,	0,5683,7128,14119,15109,
#Partially deleted in new
chr1	196943771	196959216	chr1:196943771-196959216	1	+	196943880	196959080	8553170	5	167,33,177,183,336,	0,5845,7080,14119,15109,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	196943775	196945675	chr1:196943775-196945675	0	+	196943775	196943775	8553170	2	163,754,	0,1146,
#Partially deleted in new
chr1	196943783	196949873	chr1:196943783-196949873	0	+	196943783	196943783	8553170	2	155,419,	0,5671,
#Partially deleted in new
chr1	196943816	196950939	chr1:196943816-196950939	0	+	196943816	196943816	8553170	3	122,214,88,	0,5619,7035,
#Partially deleted in new
chr1	196943836	196959219	chr1:196943836-196959219	1	+	196943880	196959080	8553170	4	102,177,183,339,	0,7015,14054,15044,
#Partially deleted in new
chr1	196943857	196959215	chr1:196943857-196959215	1	+	196943880	196959080	789624	3	81,183,335,	0,14033,15023,
#Partially deleted in new
chr1	196943884	196959106	chr1:196943884-196959106	0	+	196943884	196959080	8553170	4	54,195,183,226,	0,5570,14006,14996,
#Deleted in new
chr1	196970494	196970671	chr1:196970494-196970671	7	+	196970494	196970494	16724991	1	177,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	196977555	197009674	chr1:196977555-197009674	3	+	196977664	197008683	789624	10	167,195,177,177,183,180,177,183,183,1188,	0,5329,6405,16524,18161,18466,20572,24926,27105,30931,
#Partially deleted in new
chr1	197038740	197055823	chr1:197038740-197055823	0	-	197039377	197055823	8553170	5	671,214,183,201,109,	0,1781,11956,13893,16974,
#Partially deleted in new
chr1	197039190	197067267	chr1:197039190-197067267	3	-	197039377	197067223	789624	12	221,214,183,201,183,186,180,177,177,186,201,108,	0,1331,11506,13443,16524,17822,18095,21175,21708,22593,23666,27969,
#Partially deleted in new
chr1	197040144	197050845	chr1:197040144-197050845	0	-	197040144	197040144	8553170	3	233,214,149,	0,377,10552,
#Partially deleted in new
chr1	197084127	197146694	chr1:197084127-197146694	1	-	197084323	197146437	789624	27	299,170,177,155,193,192,150,210,97,167,195,129,143,208,222,86,146,176,131,142,68,246,147,105,1480,144,554,	0,2675,4128,5802,6068,6722,7779,8924,9956,11870,33661,37787,38031,38260,39982,40742,40918,44362,45059,45787,48157,49222,50968,55639,58203,59829,62013,
#Partially deleted in new
chr1	197084127	197146694	chr1:197084127-197146694	3	-	197084323	197146437	789624	28	299,170,177,155,193,192,150,210,97,167,4755,195,129,143,208,222,86,146,176,131,142,68,246,147,105,1480,144,554,	0,2675,4128,5802,6068,6722,7779,8924,9956,11870,16303,33661,37787,38031,38260,39982,40742,40918,44362,45059,45787,48157,49222,50968,55639,58203,59829,62013,
#Partially deleted in new
chr1	197084131	197135144	chr1:197084131-197135144	1	-	197084323	197133518	789624	23	295,170,177,155,193,192,150,210,97,167,195,129,143,208,222,86,146,176,131,142,68,246,49,	0,2671,4124,5798,6064,6718,7775,8920,9952,11866,33657,37783,38027,38256,39978,40738,40914,44358,45055,45783,48153,49218,50964,
#Deleted in new
chr1	197138747	197139307	chr1:197138747-197139307	7	-	197138747	197138747	16724991	1	560,	0,
#Partially deleted in new
chr1	197153679	197200542	chr1:197153679-197200542	3	-	197159358	197200473	789624	10	6335,89,106,107,96,130,148,70,208,1189,	0,18480,21330,22884,24737,27308,34612,37082,38012,45674,
#Partially deleted in new
chr1	197158441	197200521	chr1:197158441-197200521	0	-	197158441	197158441	789624	11	1573,89,106,84,107,96,130,148,70,208,1168,	0,13718,16568,17489,18122,19975,22546,29850,32320,33250,40912,
#Deleted in new
chr1	197222221	197223255	chr1:197222221-197223255	7	+	197222221	197222221	16724991	1	1034,	0,
#Partially deleted in new
chr1	197268203	197478454	chr1:197268203-197478454	1	+	197328558	197477879	789624	13	279,582,196,140,183,957,548,135,166,907,129,127,791,	0,60218,76077,79136,88627,152796,159250,160770,161245,166502,170343,173962,209460,
#Partially deleted in new
chr1	197268203	197478454	chr1:197268203-197478454	1	+	197268412	197477879	0	10	279,582,196,140,183,957,13,129,127,791,	0,60218,76077,79136,88627,152796,167396,170343,173962,209460,
#Partially deleted in new
chr1	197268275	197358128	chr1:197268275-197358128	0	+	197268275	197268275	8553170	5	207,582,196,140,1298,	0,60146,76005,79064,88555,
#Partially deleted in new
chr1	197268277	197478455	chr1:197268277-197478455	3	+	197268412	197477879	0	12	205,582,196,140,183,957,548,166,907,129,127,792,	0,60144,76003,79062,88553,152722,159176,161171,166428,170269,173888,209386,
#Partially deleted in new
chr1	197268277	197478455	chr1:197268277-197478455	0	+	197268412	197442418	0	12	205,582,196,140,183,957,548,166,907,129,369,792,	0,60144,76003,79062,88553,152722,159176,161171,166428,170269,173888,209386,
#Partially deleted in new
chr1	197268277	197442500	chr1:197268277-197442500	1	+	197268412	197442418	0	11	205,582,196,140,183,957,548,166,907,129,335,	0,60144,76003,79062,88553,152722,159176,161171,166428,170269,173888,
#Partially deleted in new
chr1	197268412	197477879	chr1:197268412-197477879	1	+	197268412	197477879	0	10	70,582,183,957,548,166,907,129,127,216,	0,60009,88418,152587,159041,161036,166293,170134,173753,209251,
#Deleted in new
chr1	197363816	197364078	chr1:197363816-197364078	7	+	197363816	197363816	16724991	1	262,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	197413828	197444819	chr1:197413828-197444819	1	+	197421685	197438679	789624	6	172,957,548,166,907,6273,	0,7171,13625,15620,20877,24718,
#Partially deleted in new
chr1	197422810	197427837	chr1:197422810-197427837	0	+	197422810	197422810	8553170	2	29,384,	0,4643,
#Partially deleted in new
chr1	197437975	197447469	chr1:197437975-197447469	3	-	197437975	197437975	8553170	4	138,110,259,41,	0,1098,4258,9453,
#Partially deleted in new
chr1	197442169	197478455	chr1:197442169-197478455	0	+	197442169	197477553	789624	2	123,908,	0,35378,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr1	197504747	197775493	chr1:197504747-197775493	1	-	197510459	197775155	0	23	6225,217,83,108,57,69,41,91,102,126,102,46,101,111,54,60,81,70,120,50,44,65,355,	0,6980,8123,35216,36211,41174,41985,48274,78404,90460,102325,107183,112911,137963,140942,142307,147487,153552,167289,169372,210283,268120,270391,
#Partially deleted in new
chr1	197509643	197775307	chr1:197509643-197775307	0	-	197545959	197775155	789624	20	1329,217,83,108,57,69,41,126,102,46,101,111,54,81,70,120,50,44,65,169,	0,2084,3227,30320,31315,36278,37089,85564,97429,102287,108015,133067,136046,142591,148656,162393,164476,205387,263224,265495,
#Deleted in new
chr1	197545566	197546773	chr1:197545566-197546773	0	-	197545566	197545566	8553170	2	424,41,	0,1166,
#Partially deleted in new
chr1	197552254	197775192	chr1:197552254-197775192	1	-	197552980	197735637	0	16	858,102,126,102,46,101,111,54,81,70,120,50,44,211,65,54,	0,30897,42953,54818,59676,65404,90456,93435,99980,106045,119782,121865,162776,183331,220613,222884,
#Partially deleted in new
chr1	197552254	197775325	chr1:197552254-197775325	3	-	197552980	197775155	0	16	858,102,126,102,46,101,111,54,60,81,70,120,50,44,65,187,	0,30897,42953,54818,59676,65404,90456,93435,94800,99980,106045,119782,121865,162776,220613,222884,
#Partially deleted in new
chr1	197605481	197658350	chr1:197605481-197658350	0	-	197605481	197605481	8553170	7	1693,46,101,111,54,81,51,	0,6449,12177,37229,40208,46753,52818,
#Partially deleted in new
chr1	197642772	197775633	chr1:197642772-197775633	0	-	197642772	197772885	789624	8	49,54,81,70,120,50,65,94,	0,2917,9462,15527,29264,31347,130095,132767,
#Partially deleted in new
chr1	197658299	197735529	chr1:197658299-197735529	0	-	197658299	197658299	8553170	5	70,120,50,44,224,	0,13737,15820,56731,77006,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	197685639	197685740	chr1:197685639-197685740	3	-	197685639	197685639	8553170	1	101,	0,
#Partially deleted in new
chr1	197688759	197690627	chr1:197688759-197690627	7	+	197688759	197688759	16724991	3	317,250,780,	0,703,1088,
#Partially deleted in new
chr1	197734008	197775426	chr1:197734008-197775426	0	-	197734008	197734008	8553170	3	1788,65,288,	0,38859,41130,
#Partially deleted in new
chr1	197735249	197774607	chr1:197735249-197774607	0	-	197735249	197735249	8553170	3	547,65,121,	0,37618,39237,
#Deleted in new
chr1	197735635	197736107	chr1:197735635-197736107	7	+	197735635	197735635	16724991	1	472,	0,
#Partially deleted in new
chr1	197735657	197775696	chr1:197735657-197775696	0	-	197735657	197735657	8553170	3	139,65,345,	0,37210,39694,
#Partially deleted in new
chr1	197746750	197747451	chr1:197746750-197747451	7	-	197746750	197746750	16724991	1	701,	0,
#Partially deleted in new
chr1	197757318	197761965	chr1:197757318-197761965	3	+	197757318	197757318	8553170	2	83,164,	0,4483,
#Deleted in new
chr1	197902646	197907367	chr1:197902646-197907367	3	+	197902649	197907220	789624	3	267,102,219,	0,3149,4502,
#Deleted in new
chr1	197902777	197907367	chr1:197902777-197907367	0	+	197902777	197907220	789624	3	73,102,219,	0,3018,4371,
#Deleted in new
chr1	197905516	197907364	chr1:197905516-197907364	0	+	197905516	197905516	8553170	3	23,102,216,	0,279,1632,
#Deleted in new
chr1	197911901	197917991	chr1:197911901-197917991	0	+	197917880	197917991	789624	4	143,104,71,113,	0,239,587,5977,
#Deleted in new
chr1	197912129	197913180	chr1:197912129-197913180	0	+	197912129	197912129	8553170	1	1051,	0,
#Deleted in new
chr1	197912487	197917959	chr1:197912487-197917959	0	+	197917880	197917959	789624	3	72,106,81,	0,527,5391,
#Deleted in new
chr1	197912490	197932591	chr1:197912490-197932591	1	+	197912531	197931975	0	6	69,119,203,356,203,673,	0,5388,7481,8813,15100,19428,
#Deleted in new
chr1	197912504	197935478	chr1:197912504-197935478	3	+	197912531	197929259	0	6	55,119,203,356,203,6477,	0,5374,7467,8799,15086,16497,
#Deleted in new
chr1	197915836	197932266	chr1:197915836-197932266	1	+	197916678	197931975	789624	6	915,119,203,356,203,348,	0,2042,4135,5467,11754,16082,
#Deleted in new
chr1	197917354	197918766	chr1:197917354-197918766	1	+	197917880	197918363	789624	3	188,119,451,	0,524,961,
#Deleted in new
chr1	197917398	197935476	chr1:197917398-197935476	1	+	197917823	197929259	0	5	599,203,356,203,6475,	0,2573,3905,10192,11603,
#Partially deleted in new
chr1	198156962	198322420	chr1:198156962-198322420	3	+	198232580	198319522	0	10	314,85,141,63,111,109,108,95,114,3009,	0,75590,96077,105612,107162,120998,121991,135982,140164,162449,
#Partially deleted in new
chr1	198156993	198253078	chr1:198156993-198253078	0	+	198232580	198253078	789624	4	283,112,85,39,	0,64005,75559,96046,
#Partially deleted in new
chr1	198156997	198319522	chr1:198156997-198319522	1	+	198232580	198319522	0	10	99,85,141,63,111,109,108,95,114,111,	0,75555,96042,105577,107127,120963,121956,135947,140129,162414,
#Partially deleted in new
chr1	198157120	198256531	chr1:198157120-198256531	1	+	198232580	198256489	0	4	156,85,141,204,	0,75432,95919,99207,
#Deleted in new
chr1	198197778	198198186	chr1:198197778-198198186	7	-	198197778	198197778	16724991	1	408,	0,
#Partially deleted in new
chr1	198206873	198253168	chr1:198206873-198253168	0	+	198232580	198253168	789624	3	351,85,129,	0,25679,46166,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	198208537	198245349	chr1:198208537-198245349	0	+	198208537	198208537	8553170	4	51,112,85,161,	0,12461,24015,36651,
#Partially deleted in new
chr1	198220798	198262623	chr1:198220798-198262623	0	+	198232580	198262623	789624	4	312,85,141,49,	0,11754,32241,41776,
#Partially deleted in new
chr1	198277703	198319749	chr1:198277703-198319749	0	+	198277703	198277703	8553170	5	366,108,95,114,338,	0,1250,15241,19423,41708,
#Partially deleted in new
chr1	198523221	198540945	chr1:198523221-198540945	1	-	198529129	198540650	789624	5	343,101,46,117,71,	0,5859,13457,17347,17653,
#Partially deleted in new
chr1	198523221	198540735	chr1:198523221-198540735	1	-	198523390	198540650	789624	3	343,101,167,	0,5859,17347,
#Partially deleted in new
chr1	198523223	198540945	chr1:198523223-198540945	3	-	198523390	198540650	789624	4	341,101,117,71,	0,5857,17345,17651,
#Partially deleted in new
chr1	198523340	198540674	chr1:198523340-198540674	1	-	198523390	198540650	789624	4	224,101,18,106,	0,5740,13338,17228,
#Partially deleted in new
chr1	198597723	198598868	chr1:198597723-198598868	3	-	198597723	198597723	8553170	2	260,103,	0,1042,
#Partially deleted in new
chr1	198638456	198708157	chr1:198638456-198708157	0	+	198639268	198708157	789624	7	242,116,27,75,27,219,25,	0,769,53890,64841,66015,68277,69676,
#Partially deleted in new
chr1	198638722	198706875	chr1:198638722-198706875	0	+	198639268	198706875	789624	7	64,116,27,141,75,27,142,	0,503,53624,60841,64575,65749,68011,
#Partially deleted in new
chr1	198638967	198757283	chr1:198638967-198757283	1	+	198639268	198756181	0	30	170,116,27,75,27,219,129,138,120,159,209,61,109,35,110,91,77,37,98,126,158,136,150,91,134,135,123,179,136,1378,	0,258,53379,64330,65504,67766,69165,70719,73985,77714,79126,83448,89372,90169,92649,93332,93512,95228,95360,96159,102901,103264,105086,109141,110448,111524,113281,113626,115301,116938,
#Partially deleted in new
chr1	198639006	198757476	chr1:198639006-198757476	3	+	198639268	198756181	0	33	131,116,27,198,141,144,75,27,219,129,138,120,159,209,61,109,35,110,91,77,37,98,126,158,136,150,91,134,135,123,179,136,1571,	0,219,53340,57705,60557,63380,64291,65465,67727,69126,70680,73946,77675,79087,83409,89333,90130,92610,93293,93473,95189,95321,96120,102862,103225,105047,109102,110409,111485,113242,113587,115262,116899,
#Partially deleted in new
chr1	198639018	198732556	chr1:198639018-198732556	0	+	198639268	198732556	789624	18	119,116,27,141,75,27,219,129,138,120,159,209,61,109,35,110,91,77,	0,207,53328,60545,64279,65453,67715,69114,70668,73934,77663,79075,83397,89321,90118,92598,93281,93461,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	198639045	198704485	chr1:198639045-198704485	0	+	198639268	198704485	789624	7	92,116,27,123,141,75,14,	0,180,53301,54972,60518,64252,65426,
#Partially deleted in new
chr1	198639072	198703874	chr1:198639072-198703874	0	+	198639072	198639072	8553170	5	65,116,27,141,577,	0,153,53274,60491,64225,
#Partially deleted in new
chr1	198639094	198735252	chr1:198639094-198735252	0	+	198639268	198735252	789624	22	43,116,27,141,144,75,27,219,129,138,120,159,209,61,109,35,110,91,77,37,98,126,	0,131,53252,60469,63292,64203,65377,67639,69038,70592,73858,77587,78999,83321,89245,90042,92522,93205,93385,95101,95233,96032,
#Partially deleted in new
chr1	198639096	198693206	chr1:198639096-198693206	1	+	198639268	198692384	789624	3	41,116,860,	0,129,53250,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	198639096	198695171	chr1:198639096-198695171	1	+	198639268	198694181	789624	4	41,116,27,1154,	0,129,53250,54921,
#Partially deleted in new
chr1	198639103	198735252	chr1:198639103-198735252	0	+	198639268	198735252	789624	22	34,116,27,198,141,75,27,219,129,138,120,159,209,61,109,35,110,91,77,37,98,126,	0,122,53243,57608,60460,64194,65368,67630,69029,70583,73849,77578,78990,83312,89236,90033,92513,93196,93376,95092,95224,96023,
#Partially deleted in new
chr1	198639161	198699620	chr1:198639161-198699620	0	+	198639268	198699620	789624	4	180,27,198,57,	0,53185,57550,60402,
#Partially deleted in new
chr1	198639287	198703346	chr1:198639287-198703346	0	+	198639287	198639287	8553170	5	47,27,141,144,49,	0,53059,60276,63099,64010,
#Partially deleted in new
chr1	198639287	198703346	chr1:198639287-198703346	0	+	198639287	198639287	8553170	4	47,27,141,49,	0,53059,60276,64010,
#Partially deleted in new
chr1	198657552	198667061	chr1:198657552-198667061	3	-	198657552	198657552	8553170	3	269,84,63,	0,3070,9446,
#Partially deleted in new
chr1	198679138	198680033	chr1:198679138-198680033	7	-	198679138	198679138	16724991	2	82,466,	0,429,
#Deleted in new
chr1	198696880	198700146	chr1:198696880-198700146	0	+	198696880	198696880	8553170	2	29,583,	0,2683,
#Partially deleted in new
chr1	198712789	198718299	chr1:198712789-198718299	0	+	198712789	198712789	8553170	3	283,159,206,	0,3892,5304,
#Deleted in new
chr1	198752354	198754457	chr1:198752354-198754457	0	+	198752354	198752354	8553170	2	418,189,	0,1914,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	198807492	198827216	chr1:198807492-198827216	0	-	198807492	198807492	8553170	2	751,191,	0,19533,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	198807657	198937410	chr1:198807657-198937410	3	-	198807657	198807657	789624	3	586,159,185,	0,92753,129568,
#Deleted in new
chr1	198858872	198858982	chr1:198858872-198858982	3	-	198858872	198858872	5263520	1	110,	0,
#Deleted in new
chr1	198859043	198859153	chr1:198859043-198859153	3	-	198859043	198859043	5263520	1	110,	0,
#Partially deleted in new
chr1	198898465	198937429	chr1:198898465-198937429	1	-	198898465	198898465	8553170	2	2104,204,	0,38760,
#Deleted in new
chr1	198949015	198949805	chr1:198949015-198949805	7	+	198949015	198949015	16724991	1	790,	0,
#Partially deleted in new
chr1	199006039	199021037	chr1:199006039-199021037	3	-	199006039	199006039	8553170	3	1390,175,220,	0,2354,14778,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	199016132	199076735	chr1:199016132-199076735	3	+	199016132	199016132	789624	3	333,117,212,	0,25423,60391,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	199148597	199393307	chr1:199148597-199393307	3	+	199148597	199148597	789624	4	140,63,106,1987,	0,12825,13867,242723,
#Deleted in new
chr1	199371876	199372297	chr1:199371876-199372297	7	+	199371876	199371876	16724991	1	421,	0,
#Deleted in new
chr1	199387140	199388475	chr1:199387140-199388475	7	+	199387140	199387140	16724991	1	1335,	0,
#Deleted in new
chr1	199752490	199752890	chr1:199752490-199752890	7	+	199752490	199752490	16724991	1	400,	0,
#Partially deleted in new
chr1	199876977	199877558	chr1:199876977-199877558	7	+	199876977	199876977	16724991	2	231,20,	0,561,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	199888158	199888261	chr1:199888158-199888261	3	+	199888158	199888158	8553170	1	103,	0,
#Deleted in new
chr1	199908920	199909648	chr1:199908920-199909648	7	+	199908920	199908920	16724991	1	728,	0,
#Partially deleted in new
chr1	200008504	200008607	chr1:200008504-200008607	3	-	200008504	200008504	8553170	1	103,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	200014688	200014795	chr1:200014688-200014795	3	-	200014688	200014688	8553170	1	107,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	200027601	200177424	chr1:200027601-200177424	3	+	200027847	200174210	0	8	310,138,119,142,647,120,148,3462,	0,12056,16172,17841,20570,83600,93206,146361,
#Partially deleted in new
chr1	200027613	200175603	chr1:200027613-200175603	1	+	200027847	200174210	0	7	298,119,142,647,120,148,1641,	0,16160,17829,20558,83588,93194,146349,
#Partially deleted in new
chr1	200027656	200044535	chr1:200027656-200044535	0	+	200027847	200029310	789624	3	255,696,762,	0,1376,16117,
#Partially deleted in new
chr1	200027882	200039769	chr1:200027882-200039769	0	+	200027882	200039769	789624	3	29,72,112,	0,10818,11775,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	200042824	200177420	chr1:200042824-200177420	1	+	200043787	200174210	0	7	141,119,142,647,120,148,3458,	0,949,2618,5347,68377,77983,131138,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	200043809	200058424	chr1:200043809-200058424	0	+	200043809	200057764	789624	4	83,142,647,921,	0,1633,4362,13694,
#Deleted in new
chr1	200054060	200054165	chr1:200054060-200054165	3	+	200054060	200054060	8553170	1	105,	0,
#Deleted in new
chr1	200147530	200148279	chr1:200147530-200148279	7	-	200147530	200147530	16724991	1	749,	0,
#Deleted in new
chr1	200213677	200214322	chr1:200213677-200214322	7	+	200213677	200213677	16724991	1	645,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	200253418	200374143	chr1:200253418-200374143	0	-	200253418	200253418	8553170	5	653,207,120,77,129,	0,115246,117627,119674,120596,
#Deleted in new
chr1	200315434	200315967	chr1:200315434-200315967	3	-	200315434	200315434	8553170	1	533,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	200329160	200329677	chr1:200329160-200329677	7	+	200329160	200329160	16724991	1	517,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	200342543	200373792	chr1:200342543-200373792	1	-	200342543	200342543	789624	5	867,207,120,77,146,	0,26121,28502,30549,31103,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	200342543	200374354	chr1:200342543-200374354	1	-	200342543	200342543	8553170	4	214,128,77,340,	0,739,30549,31471,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	200366590	200400705	chr1:200366590-200400705	3	-	200366590	200366590	8553170	6	640,207,120,77,232,124,	0,2074,4455,6502,7424,33991,
#Deleted in new
chr1	200404939	200410056	chr1:200404939-200410056	3	-	200407017	200409705	789624	2	4780,111,	0,5006,
#Deleted in new
chr1	200406707	200410009	chr1:200406707-200410009	1	-	200407017	200409705	789624	2	3016,64,	0,3238,
#Deleted in new
chr1	200406729	200409992	chr1:200406729-200409992	1	-	200407017	200409705	789624	3	2723,163,47,	0,2831,3216,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	200411829	200415550	chr1:200411829-200415550	0	+	200411829	200411829	8553170	2	133,186,	0,3535,
#Partially deleted in new
chr1	200473919	200478293	chr1:200473919-200478293	0	+	200473919	200473919	8553170	2	181,326,	0,4048,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	200478019	200483604	chr1:200478019-200483604	3	-	200478019	200478019	8553170	2	135,503,	0,5082,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr1	200551496	200618723	chr1:200551496-200618723	1	-	200553387	200618723	789624	29	2271,139,75,123,159,185,225,95,101,130,94,127,153,148,161,103,185,64,148,173,116,117,108,31,53,99,88,255,1112,	0,2971,3883,7833,9225,13572,13948,18414,24094,28757,29704,34604,37720,38628,40583,42170,46740,48553,48859,50399,51729,52342,53786,54367,55249,57333,62821,63858,66115,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr1	200551499	200620734	chr1:200551499-200620734	3	-	200553387	200618723	789624	30	2268,139,75,123,159,185,225,95,101,130,94,127,153,148,161,103,185,64,148,173,116,117,108,31,53,99,88,255,1227,324,	0,2968,3880,7830,9222,13569,13945,18411,24091,28754,29701,34601,37717,38625,40580,42167,46737,48550,48856,50396,51726,52339,53783,54364,55246,57330,62818,63855,66112,68911,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	200623895	200669907	chr1:200623895-200669907	1	-	200624900	200666740	0	8	1152,129,153,252,90,168,815,141,	0,24543,25178,26529,35131,40023,42041,45871,
#Partially deleted in new
chr1	200640810	200649149	chr1:200640810-200649149	0	-	200641107	200649149	789624	3	375,129,76,	0,7628,8263,
#Partially deleted in new
chr1	200640821	200650652	chr1:200640821-200650652	0	-	200641148	200650652	789624	4	435,129,153,228,	0,7617,8252,9603,
#Partially deleted in new
chr1	200644038	200669969	chr1:200644038-200669969	3	-	200644253	200666740	0	8	479,129,153,252,90,168,815,203,	0,4400,5035,6386,14988,19880,21898,25728,
#Partially deleted in new
chr1	200644120	200663964	chr1:200644120-200663964	0	-	200644253	200663964	789624	4	397,129,153,46,	0,4318,4953,19798,
#Partially deleted in new
chr1	200644368	200654869	chr1:200644368-200654869	0	-	200644368	200650667	789624	6	149,129,153,252,142,64,	0,4070,4705,6056,10072,10437,
#Partially deleted in new
chr1	200650442	200655104	chr1:200650442-200655104	0	-	200650442	200650667	789624	3	234,110,299,	0,3998,4363,
#Partially deleted in new
chr1	200666258	200669708	chr1:200666258-200669708	0	-	200666258	200666740	789624	2	493,142,	0,3308,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	200669506	200694250	chr1:200669506-200694250	3	+	200669506	200669506	789624	3	116,122,498,	0,20802,24246,
#Partially deleted in new
chr1	200739557	200860704	chr1:200739557-200860704	3	+	200739827	200858059	789624	17	409,260,162,84,142,140,94,88,83,70,2203,137,221,73,116,119,2951,	0,21281,67818,76003,92642,93148,102436,105224,107652,108082,108474,112983,113717,115259,116452,117748,118196,
#Partially deleted in new
chr1	200739778	200860701	chr1:200739778-200860701	1	+	200739827	200858059	789624	18	188,260,162,84,33,142,140,94,88,83,70,2203,137,221,73,116,119,2948,	0,21060,67597,75782,88794,92421,92927,102215,105003,107431,107861,108253,112762,113496,115038,116231,117527,117975,
#Partially deleted in new
chr1	200739778	200858119	chr1:200739778-200858119	1	+	200739827	200858059	789624	17	188,260,162,84,142,140,94,88,35,70,2203,137,221,73,116,119,366,	0,21060,67597,75782,92421,92927,102215,105003,107479,107861,108253,112762,113496,115038,116231,117527,117975,
#Partially deleted in new
chr1	200832107	200832834	chr1:200832107-200832834	0	+	200832107	200832107	8553170	2	234,129,	0,598,
#Partially deleted in new
chr1	200832715	200853415	chr1:200832715-200853415	0	+	200832715	200852545	789624	6	130,94,88,83,137,141,	0,9278,12066,14494,19825,20559,
#Deleted in new
chr1	200856093	200857724	chr1:200856093-200857724	0	+	200856093	200857442	789624	2	32,419,	0,1212,
#Deleted in new
chr1	200863807	200864152	chr1:200863807-200864152	7	+	200863807	200863807	16724991	1	345,	0,
#Deleted in new
chr1	200872954	200874178	chr1:200872954-200874178	3	+	200873037	200874123	789624	1	1224,	0,
#Partially deleted in new
chr1	200891047	200899538	chr1:200891047-200899538	0	+	200898400	200899538	789624	3	355,149,66,	0,7259,8425,
#Partially deleted in new
chr1	200891073	200901009	chr1:200891073-200901009	0	+	200898400	200901009	789624	5	329,64,125,117,73,	0,7318,8399,9030,9863,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	200891340	200915735	chr1:200891340-200915735	1	+	200891540	200913629	789624	10	361,149,125,117,223,54,211,174,685,2199,	0,6966,8132,8763,9596,16493,17389,17883,20112,22196,
#Partially deleted in new
chr1	200894820	200913728	chr1:200894820-200913728	3	+	200898400	200913629	789624	10	267,149,125,117,223,54,211,174,685,192,	0,3486,4652,5283,6116,13013,13909,14403,16632,18716,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	200902951	200908162	chr1:200902951-200908162	0	+	200902951	200902951	8553170	4	149,304,54,47,	0,3240,4882,5164,
#Partially deleted in new
chr1	200908494	200911598	chr1:200908494-200911598	0	+	200908494	200908494	8553170	4	55,211,174,146,	0,235,729,2958,
#Partially deleted in new
chr1	200917459	200966536	chr1:200917459-200966536	7	+	200917459	200917459	16724991	22	88,65,123,80,126,87,108,136,89,150,155,145,176,138,116,141,177,159,102,103,60,152,	0,2995,3534,3800,4276,5215,10854,11469,12430,14809,19720,30632,31237,32064,32299,39839,40563,41369,42872,47571,48250,48925,
#Partially deleted in new
chr1	200922690	200966668	chr1:200922690-200966668	5	+	200922690	200922690	16724991	18	71,186,136,89,150,152,145,176,138,116,141,120,177,210,102,103,60,284,	0,5541,6238,7199,9578,14489,25401,26006,26833,27068,34608,35016,35332,36138,37641,42340,43019,43694,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	200933344	200933447	chr1:200933344-200933447	3	-	200933344	200933344	8553170	1	103,	0,
#Partially deleted in new
chr1	200969389	201023700	chr1:200969389-201023700	3	-	200974094	201023383	789624	34	4805,200,171,118,165,181,137,114,75,206,58,52,166,102,195,148,233,69,108,200,192,118,82,219,64,190,196,116,168,135,150,183,223,358,	0,5324,6109,7386,7822,10145,11570,15469,17454,17606,18906,19103,19376,20552,20748,21186,21527,22267,22892,26806,28994,29959,30493,31000,31327,32771,34196,34950,35376,35918,36155,39379,39876,53953,
#Partially deleted in new
chr1	200972989	201023408	chr1:200972989-201023408	1	-	200973520	201023383	789624	34	589,200,171,118,165,181,137,114,75,206,58,52,166,102,195,148,233,69,108,200,192,118,82,219,64,190,196,116,168,135,150,183,223,66,	0,1724,2509,3786,4222,6545,7970,11869,13854,14006,15306,15503,15776,16952,17148,17586,17927,18667,19292,23206,25394,26359,26893,27400,27727,29171,30596,31350,31776,32318,32555,35779,36276,50353,
#Partially deleted in new
chr1	200972989	201023408	chr1:200972989-201023408	1	-	200973520	201023383	789624	35	589,200,171,118,165,181,137,39,114,75,206,58,52,166,102,195,148,233,69,108,200,192,118,82,219,64,190,196,116,168,135,150,183,223,66,	0,1724,2509,3786,4222,6545,7970,10066,11869,13854,14006,15306,15503,15776,16952,17148,17586,17927,18667,19292,23206,25394,26359,26893,27400,27727,29171,30596,31350,31776,32318,32555,35779,36276,50353,
#Partially deleted in new
chr1	200973806	201023700	chr1:200973806-201023700	1	-	200974094	201023383	789624	35	388,200,171,118,165,181,137,39,114,75,206,58,52,166,102,195,148,233,69,108,200,192,118,82,219,64,190,196,116,168,135,150,183,223,358,	0,907,1692,2969,3405,5728,7153,9249,11052,13037,13189,14489,14686,14959,16135,16331,16769,17110,17850,18475,22389,24577,25542,26076,26583,26910,28354,29779,30533,30959,31501,31738,34962,35459,49536,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	201001406	201005590	chr1:201001406-201005590	0	-	201001406	201001406	8553170	5	2375,116,393,135,46,	0,2933,3134,3901,4138,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	201023948	201027790	chr1:201023948-201027790	0	+	201023948	201023948	8553170	2	128,2369,	0,1473,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	201023960	201028792	chr1:201023960-201028792	3	+	201023960	201023960	8553170	2	125,3371,	0,1461,
#Partially deleted in new
chr1	201031135	201036675	chr1:201031135-201036675	1	+	201031135	201031135	8553170	3	96,72,388,	0,3916,5152,
#Partially deleted in new
chr1	201035095	201043073	chr1:201035095-201043073	3	+	201035095	201035095	8553170	4	28,182,79,219,	0,1192,6759,7759,
#Partially deleted in new
chr1	201039511	201112451	chr1:201039511-201112451	1	-	201039830	201112339	789624	43	571,144,92,86,251,129,125,102,103,97,128,160,92,66,129,84,111,159,202,147,53,108,88,107,60,130,133,70,94,115,121,208,226,161,82,146,104,206,153,143,140,106,264,	0,719,1110,1992,3769,4816,7603,8013,9070,9491,10877,11472,13045,13697,13947,18896,19677,21146,21755,22432,22950,26326,26717,27375,29625,29960,30760,33243,34037,34994,35983,37408,38367,43650,45438,45924,48314,49746,52128,52460,54370,70652,72676,
#Partially deleted in new
chr1	201039513	201112566	chr1:201039513-201112566	3	-	201039830	201112339	0	44	569,144,92,86,251,129,125,102,103,97,128,160,92,66,129,57,84,111,159,202,147,53,108,88,107,60,130,133,70,94,115,121,208,226,161,82,146,104,206,153,143,140,106,379,	0,717,1108,1990,3767,4814,7601,8011,9068,9489,10875,11470,13043,13695,13945,14991,18894,19675,21144,21753,22430,22948,26324,26715,27373,29623,29958,30758,33241,34035,34992,35981,37406,38365,43648,45436,45922,48312,49744,52126,52458,54368,70650,72674,
#Partially deleted in new
chr1	201113952	201127184	chr1:201113952-201127184	3	-	201114751	201115372	789624	2	1925,101,	0,13131,
#Deleted in new
chr1	201113952	201115372	chr1:201113952-201115372	1	-	201114751	201115372	789624	1	1420,	0,
#Partially deleted in new
chr1	201134771	201171574	chr1:201134771-201171574	3	-	201135662	201153923	789624	6	1044,132,109,92,102,85,	0,9048,11968,16989,19086,36718,
#Partially deleted in new
chr1	201134771	201154494	chr1:201134771-201154494	1	-	201135662	201153923	789624	6	1044,132,109,92,102,50,	0,9048,11968,16989,19086,19673,
#Partially deleted in new
chr1	201134772	201154440	chr1:201134772-201154440	1	-	201135662	201153923	789624	5	1043,132,109,92,583,	0,9047,11967,16988,19085,
#Partially deleted in new
chr1	201134772	201154501	chr1:201134772-201154501	1	-	201135662	201153923	789624	6	1043,132,109,92,111,57,	0,9047,11967,16988,19076,19672,
#Deleted in new
chr1	201134772	201145668	chr1:201134772-201145668	0	-	201134772	201134772	8553170	2	1043,1849,	0,9047,
#Partially deleted in new
chr1	201135508	201153961	chr1:201135508-201153961	0	-	201135508	201135508	8553170	6	307,132,227,109,92,104,	0,8311,9600,11231,16252,18349,
#Partially deleted in new
chr1	201135598	201154433	chr1:201135598-201154433	1	-	201135662	201153923	789624	6	217,132,109,92,102,286,	0,8221,11141,16162,18259,18549,
#Partially deleted in new
chr1	201135623	201154438	chr1:201135623-201154438	0	-	201143890	201153923	789624	5	192,132,78,92,581,	0,8196,11147,16137,18234,
#Partially deleted in new
chr1	201135782	201153957	chr1:201135782-201153957	0	-	201135782	201153923	789624	5	33,132,130,92,100,	0,8037,10957,15978,18075,
#Partially deleted in new
chr1	201135800	201154464	chr1:201135800-201154464	0	-	201135800	201153923	789624	6	15,132,109,92,177,20,	0,8019,10939,15960,17982,18644,
#Partially deleted in new
chr1	201135800	201154418	chr1:201135800-201154418	0	-	201135800	201153923	789624	6	15,132,109,92,102,57,	0,8019,10939,15960,18057,18561,
#Partially deleted in new
chr1	201190824	201228952	chr1:201190824-201228952	1	+	201193293	201228399	789624	25	83,54,120,140,100,45,46,175,114,169,273,52,116,125,142,300,300,174,129,303,89,196,300,327,567,	0,2422,3329,5014,6393,8509,8784,9412,10894,12913,14257,15258,22681,23352,24188,24714,25629,26462,27705,30619,31914,33854,34999,36057,37561,
#Partially deleted in new
chr1	201190824	201228952	chr1:201190824-201228952	3	+	201193293	201228399	789624	24	83,54,120,140,100,45,46,175,114,169,273,7539,125,142,300,300,174,129,303,89,196,300,327,567,	0,2422,3329,5014,6393,8509,8784,9412,10894,12913,14257,15258,23352,24188,24714,25629,26462,27705,30619,31914,33854,34999,36057,37561,
#Partially deleted in new
chr1	201190824	201228648	chr1:201190824-201228648	0	+	201193293	201215983	789624	26	83,54,120,140,100,45,46,175,114,169,273,52,116,125,142,71,179,300,174,129,303,89,196,300,327,263,	0,2422,3329,5014,6393,8509,8784,9412,10894,12913,14257,15258,22681,23352,24188,24714,25141,25629,26462,27705,30619,31914,33854,34999,36057,37561,
#Deleted in new
chr1	201205081	201206475	chr1:201205081-201206475	0	+	201205081	201205081	8553170	2	273,393,	0,1001,
#Partially deleted in new
chr1	201212641	201228952	chr1:201212641-201228952	0	+	201212641	201228399	789624	13	980,125,142,300,300,174,129,303,89,196,300,327,567,	0,1535,2371,2897,3812,4645,5888,8802,10097,12037,13182,14240,15744,
#Partially deleted in new
chr1	201213095	201228952	chr1:201213095-201228952	0	+	201213095	201213095	8553170	12	526,125,142,606,300,174,129,303,89,300,327,567,	0,1081,1917,2443,3358,4191,5434,8348,9643,12728,13786,15290,
#Deleted in new
chr1	201222112	201223123	chr1:201222112-201223123	3	-	201222112	201222112	8553170	2	313,458,	0,553,
#Partially deleted in new
chr1	201283451	201332993	chr1:201283451-201332993	1	+	201283702	201328836	0	15	453,104,395,145,208,178,63,115,156,177,154,187,85,107,2920,	0,10490,29714,33101,34120,35166,36364,36815,38526,39561,40976,41489,42302,45310,46622,
#Partially deleted in new
chr1	201283451	201332993	chr1:201283451-201332993	3	+	201283702	201328836	0	14	453,104,395,145,208,178,115,156,177,154,187,85,107,2920,	0,10490,29714,33101,34120,35166,36815,38526,39561,40976,41489,42302,45310,46622,
#Partially deleted in new
chr1	201283702	201328836	chr1:201283702-201328836	1	+	201283702	201328836	0	14	202,104,395,145,208,178,63,115,156,177,154,187,85,75,	0,10239,29463,32850,33869,34915,36113,36564,38275,39310,40725,41238,42051,45059,
#Deleted in new
chr1	201316191	201320172	chr1:201316191-201320172	0	+	201316191	201316191	8553170	5	43,145,208,178,357,	0,361,1380,2426,3624,
#Deleted in new
chr1	201328334	201330170	chr1:201328334-201330170	0	+	201328334	201328334	8553170	2	534,97,	0,1739,
#Partially deleted in new
chr1	201359007	201377661	chr1:201359007-201377661	1	-	201359209	201373254	0	16	248,41,91,110,9,111,78,117,61,34,36,66,15,11,55,39,	0,615,2271,2905,3378,4288,5290,6183,6602,7830,8763,9154,13019,13137,14206,18615,
#Partially deleted in new
chr1	201359007	201377680	chr1:201359007-201377680	1	-	201359209	201373254	0	15	248,41,91,110,111,78,117,61,34,36,66,15,11,55,58,	0,615,2271,2905,4288,5290,6183,6602,7830,8763,9154,13019,13137,14206,18615,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	201359007	201364188	chr1:201359007-201364188	0	-	201359007	201359007	8553170	6	248,41,917,110,9,893,	0,615,1445,2905,3378,4288,
#Partially deleted in new
chr1	201359007	201363350	chr1:201359007-201363350	0	-	201359007	201359007	8553170	6	248,41,91,72,9,55,	0,615,2271,2943,3378,4288,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	201359007	201377680	chr1:201359007-201377680	0	-	201359007	201359007	8553170	15	248,41,91,110,9,111,78,117,1262,36,66,15,11,55,58,	0,615,2271,2905,3378,4288,5290,6183,6602,8763,9154,13019,13137,14206,18615,
#Partially deleted in new
chr1	201359008	201373254	chr1:201359008-201373254	1	-	201359209	201373254	0	16	247,41,91,110,9,111,78,117,61,34,36,66,30,15,11,41,	0,614,2270,2904,3377,4287,5289,6182,6601,7829,8762,9153,10807,13018,13136,14205,
#Partially deleted in new
chr1	201359008	201373254	chr1:201359008-201373254	1	-	201359209	201373254	0	14	247,41,91,110,111,78,61,34,33,66,30,15,11,41,	0,614,2270,2904,4287,5289,6601,7829,8762,9153,10807,13018,13136,14205,
#Partially deleted in new
chr1	201359008	201373254	chr1:201359008-201373254	1	-	201359209	201373254	789624	14	247,41,91,110,6,111,78,117,61,34,36,66,11,41,	0,614,2270,2904,3377,4287,5289,6182,6601,7829,8762,9153,13136,14205,
#Partially deleted in new
chr1	201359008	201377700	chr1:201359008-201377700	1	-	201359209	201366863	789624	15	247,41,91,110,111,78,117,61,34,36,66,30,19,63,78,	0,614,2270,2904,4287,5289,6182,6601,7829,8762,9153,10807,13018,14197,18614,
#Partially deleted in new
chr1	201359014	201373266	chr1:201359014-201373266	1	-	201359209	201373254	789624	14	241,41,91,122,111,78,117,61,34,36,66,19,15,51,	0,608,2264,2898,4281,5283,6176,6595,7823,8756,9147,13012,14182,14201,
#Partially deleted in new
chr1	201359018	201377664	chr1:201359018-201377664	1	-	201359209	201366863	789624	13	237,41,91,110,111,78,117,61,34,36,66,60,42,	0,604,2260,2894,4277,5279,6172,6591,7819,8752,9143,14190,18604,
#Partially deleted in new
chr1	201359023	201377661	chr1:201359023-201377661	1	-	201359209	201373254	0	15	232,41,91,110,111,78,61,34,33,66,30,15,11,55,39,	0,599,2255,2889,4272,5274,6586,7814,8747,9138,10792,13003,13121,14190,18599,
#Partially deleted in new
chr1	201359033	201377762	chr1:201359033-201377762	3	-	201359209	201373254	0	16	222,41,91,110,9,111,78,117,61,34,36,66,15,11,188,140,	0,589,2245,2879,3352,4262,5264,6157,6576,7804,8737,9128,12993,13111,14180,18589,
#Partially deleted in new
chr1	201359244	201377664	chr1:201359244-201377664	0	-	201359244	201373254	789624	15	11,41,91,110,6,111,78,117,61,34,36,66,11,55,42,	0,378,2034,2668,3141,4051,5053,5946,6365,7593,8526,8917,12900,13969,18378,
#Partially deleted in new
chr1	201360826	201366966	chr1:201360826-201366966	0	-	201360826	201360826	8553170	8	543,110,9,111,78,117,61,129,	0,1086,1559,2469,3471,4364,4783,6011,
#Deleted in new
chr1	201361011	201361357	chr1:201361011-201361357	0	-	201361011	201361011	8553170	2	155,79,	0,267,
#Partially deleted in new
chr1	201363328	201373315	chr1:201363328-201373315	0	-	201363328	201363328	8553170	9	78,78,117,61,34,33,66,129,197,	0,969,1862,2281,3509,4442,4833,8698,9790,
#Partially deleted in new
chr1	201363355	201377633	chr1:201363355-201377633	0	-	201363355	201373254	789624	12	51,78,117,61,34,36,66,30,15,11,55,11,	0,942,1835,2254,3482,4415,4806,6460,8671,8789,9858,14267,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	201363926	201367808	chr1:201363926-201367808	0	-	201363926	201363926	8553170	5	449,117,61,34,38,	0,1264,1683,2911,3844,
#Partially deleted in new
chr1	201365244	201377652	chr1:201365244-201377652	0	-	201365244	201373254	789624	9	63,61,34,36,66,30,11,55,30,	0,365,1593,2526,2917,4571,6900,7969,12378,
#Partially deleted in new
chr1	201365275	201377664	chr1:201365275-201377664	0	-	201365275	201373254	789624	9	32,61,34,33,66,15,11,55,42,	0,334,1562,2495,2886,6751,6869,7938,12347,
#Deleted in new
chr1	201366394	201368314	chr1:201366394-201368314	0	-	201366394	201366394	8553170	3	477,36,153,	0,1376,1767,
#Deleted in new
chr1	201366842	201373265	chr1:201366842-201373265	0	-	201366842	201366842	8553170	6	29,33,66,15,11,147,	0,928,1319,5184,5302,6276,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	201367142	201375368	chr1:201367142-201375368	0	-	201367142	201367142	8553170	4	664,66,129,2155,	0,1019,4884,6071,
#Partially deleted in new
chr1	201367452	201377680	chr1:201367452-201377680	0	-	201367452	201367452	8553170	6	354,66,15,11,55,58,	0,709,4574,4692,5761,10170,
#Partially deleted in new
chr1	201373243	201385784	chr1:201373243-201385784	0	-	201373246	201385784	789624	8	25,56,75,87,138,73,44,84,	0,4379,9008,9409,9830,10073,11548,12457,
#Partially deleted in new
chr1	201380837	201399608	chr1:201380837-201399608	3	-	201381887	201399306	789624	10	1056,75,87,138,73,44,105,844,144,340,	0,1414,1815,2236,2479,3954,4863,5497,8322,18431,
#Partially deleted in new
chr1	201381206	201399548	chr1:201381206-201399548	1	-	201381887	201399489	789624	10	687,75,87,138,73,44,105,844,144,139,	0,1045,1446,1867,2110,3585,4494,5128,7953,18203,
#Deleted in new
chr1	201382283	201383208	chr1:201382283-201383208	0	-	201382283	201382283	8553170	3	43,153,135,	0,369,790,
#Deleted in new
chr1	201382685	201383573	chr1:201382685-201383573	0	-	201382685	201382685	8553170	3	54,138,257,	0,388,631,
#Partially deleted in new
chr1	201386810	201399915	chr1:201386810-201399915	0	-	201386810	201399915	789624	3	368,144,38,	0,2349,13067,
#Partially deleted in new
chr1	201386846	201397316	chr1:201386846-201397316	0	-	201386846	201397316	789624	3	332,144,89,	0,2313,10381,
#Partially deleted in new
chr1	201386892	201399309	chr1:201386892-201399309	0	-	201386892	201391181	789624	4	286,144,118,41,	0,2267,4185,12376,
#Deleted in new
chr1	201399632	201401190	chr1:201399632-201401190	3	+	201399632	201399632	8553170	2	158,398,	0,1160,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	201403767	201421746	chr1:201403767-201421746	1	-	201410327	201417793	789624	8	5483,110,177,90,132,46,30,74,	0,6558,7589,9264,10750,11445,14015,17905,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	201404496	201421746	chr1:201404496-201421746	1	-	201410327	201417793	789624	9	4754,110,177,90,132,42,4,30,74,	0,5829,6860,8535,10021,10716,12619,13286,17176,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	201408863	201429866	chr1:201408863-201429866	3	-	201410327	201417793	789624	12	387,110,177,90,132,42,4,30,54,119,437,168,	0,1462,2493,4168,5654,6349,8252,8919,12809,18311,19974,20835,
#Partially deleted in new
chr1	201409066	201422021	chr1:201409066-201422021	1	-	201410327	201417793	789624	9	184,68,63,132,42,4,30,54,3,	0,1259,3992,5451,6146,8049,8716,12606,12952,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	201409856	201421718	chr1:201409856-201421718	1	-	201410327	201417793	789624	8	579,177,90,132,42,4,30,46,	0,1500,3175,4661,5356,7259,7926,11816,
#Partially deleted in new
chr1	201411356	201421726	chr1:201411356-201421726	0	-	201411356	201414643	789624	7	177,90,132,42,4,66,54,	0,1675,3161,3856,5759,6390,10316,
#Partially deleted in new
chr1	201411401	201422167	chr1:201411401-201422167	0	-	201411401	201417793	789624	8	132,90,132,42,4,30,54,149,	0,1630,3116,3811,5714,6381,10271,10617,
#Partially deleted in new
chr1	201428974	201429361	chr1:201428974-201429361	7	+	201428974	201428974	16724991	1	387,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	201464382	201469184	chr1:201464382-201469184	3	-	201468402	201468786	789624	2	1796,844,	0,3958,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	201464382	201465146	chr1:201464382-201465146	3	-	201464382	201464382	8553170	2	512,86,	0,678,
#Deleted in new
chr1	201465943	201466657	chr1:201465943-201466657	0	-	201465943	201465943	8553170	2	235,347,	0,367,
#Partially deleted in new
chr1	201465957	201469237	chr1:201465957-201469237	1	-	201468402	201468786	789624	3	221,608,67,	0,2383,3213,
#Partially deleted in new
chr1	201483529	201509456	chr1:201483529-201509456	3	-	201484712	201496303	789624	7	1260,94,130,169,113,343,20,	0,1753,5325,6646,12662,23540,25907,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	201483531	201492901	chr1:201483531-201492901	0	-	201483531	201483531	8553170	4	1258,94,130,2726,	0,1751,5323,6644,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	201483531	201496301	chr1:201483531-201496301	0	-	201483531	201483531	8553170	4	1258,3702,169,110,	0,1751,6644,12660,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	201483531	201492499	chr1:201483531-201492499	0	-	201483531	201483531	8553170	2	1258,7217,	0,1751,
#Partially deleted in new
chr1	201483533	201507259	chr1:201483533-201507259	1	-	201484712	201496303	789624	6	1256,94,130,169,113,190,	0,1749,5321,6642,12658,23536,
#Partially deleted in new
chr1	201483925	201509456	chr1:201483925-201509456	1	-	201483989	201496303	789624	6	133,112,169,113,343,20,	0,4947,6250,12266,23144,25511,
#Partially deleted in new
chr1	201483978	201496573	chr1:201483978-201496573	1	-	201484712	201496303	789624	6	811,94,130,169,113,152,	0,1304,4876,6197,12213,12443,
#Partially deleted in new
chr1	201484239	201507123	chr1:201484239-201507123	1	-	201484712	201496303	789624	3	499,29,54,	0,12036,22830,
#Partially deleted in new
chr1	201484362	201506839	chr1:201484362-201506839	1	-	201484712	201496303	789624	6	427,94,130,169,113,216,	0,920,4492,5813,11829,22261,
#Partially deleted in new
chr1	201484668	201507123	chr1:201484668-201507123	0	-	201484668	201484668	8553170	5	121,94,130,169,54,	0,614,4186,5507,22401,
#Partially deleted in new
chr1	201484676	201507123	chr1:201484676-201507123	0	-	201484676	201484676	8553170	4	113,94,113,54,	0,606,11515,22393,
#Partially deleted in new
chr1	201484676	201507123	chr1:201484676-201507123	1	-	201484712	201496303	789624	6	113,94,130,116,67,54,	0,606,4178,5499,11561,22393,
#Partially deleted in new
chr1	201484724	201507123	chr1:201484724-201507123	0	-	201484724	201496192	789624	6	65,94,130,169,70,54,	0,558,4130,5451,11467,22345,
#Partially deleted in new
chr1	201486157	201507123	chr1:201486157-201507123	0	-	201486157	201486157	8553170	5	858,130,169,113,54,	0,2697,4018,10034,20912,
#Partially deleted in new
chr1	201486914	201507123	chr1:201486914-201507123	0	-	201486914	201486914	8553170	5	101,130,169,113,54,	0,1940,3261,9277,20155,
#Partially deleted in new
chr1	201488050	201506703	chr1:201488050-201506703	0	-	201488050	201488050	8553170	5	54,130,169,113,82,	0,804,2125,8141,18571,
#Partially deleted in new
chr1	201488626	201507123	chr1:201488626-201507123	0	-	201488626	201488626	8553170	3	358,169,54,	0,1549,18443,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	201489733	201507103	chr1:201489733-201507103	0	-	201489733	201489733	8553170	3	611,113,34,	0,6458,17336,
#Partially deleted in new
chr1	201495598	201507104	chr1:201495598-201507104	0	-	201495598	201495598	8553170	2	706,35,	0,11471,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	201507240	201534784	chr1:201507240-201534784	3	+	201507240	201507240	8553170	2	179,1337,	0,26207,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	201518702	201530474	chr1:201518702-201530474	5	+	201518702	201518702	16724991	2	1948,381,	0,11391,
#Partially deleted in new
chr1	201520055	201520549	chr1:201520055-201520549	5	+	201520055	201520055	16724991	1	494,	0,
#Deleted in new
chr1	201622884	201623610	chr1:201622884-201623610	1	+	201622884	201623610	8553170	1	726,	0,
#Partially deleted in new
chr1	201622926	201823344	chr1:201622926-201823344	1	+	201629503	201819932	789624	30	680,104,792,103,366,139,298,694,447,42,149,53,24,78,84,112,122,197,193,169,98,96,160,236,155,72,197,119,198,3508,	0,6477,25707,89890,95463,157494,158085,159249,160479,162383,163502,166813,167627,167762,170865,171539,180666,185026,185491,185776,186237,186515,187019,187596,188676,188976,189538,190213,194161,196910,
#Partially deleted in new
chr1	201623282	201629540	chr1:201623282-201629540	0	+	201623282	201623282	8553170	2	324,137,	0,6121,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr1	201648248	201826969	chr1:201648248-201826969	3	+	201648668	201819932	789624	30	1177,103,366,139,298,694,447,42,149,171,53,24,78,84,112,122,9,197,193,169,98,96,160,236,155,72,197,119,198,7133,	0,64568,70141,132172,132763,133927,135157,137061,138180,140219,141491,142305,142440,145543,146217,155344,156240,159704,160169,160454,160915,161193,161697,162274,163354,163654,164216,164891,168839,171588,
#Partially deleted in new
chr1	201673104	201674144	chr1:201673104-201674144	3	-	201673104	201673104	8553170	2	262,317,	0,723,
#Partially deleted in new
chr1	201688258	201829559	chr1:201688258-201829559	3	-	201688258	201688258	789624	3	155,75,609,	0,128968,140692,
#Deleted in new
chr1	201719507	201719627	chr1:201719507-201719627	3	+	201719507	201719507	5263520	1	120,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	201723293	201737506	chr1:201723293-201737506	3	-	201723293	201723293	8553170	2	1622,187,	0,14026,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	201733405	201733505	chr1:201733405-201733505	3	+	201733405	201733405	8553170	1	100,	0,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr1	201739867	201826969	chr1:201739867-201826969	1	+	201740023	201819932	789624	27	209,139,298,694,447,42,149,171,53,24,78,84,112,122,197,193,169,98,96,160,236,155,72,197,119,198,7133,	0,40553,41144,42308,43538,45442,46561,48600,49872,50686,50821,53924,54598,63725,68085,68550,68835,69296,69574,70078,70655,71735,72035,72597,73272,77220,79969,
#Partially deleted in new
chr1	201780522	201803690	chr1:201780522-201803690	0	+	201780522	201803690	789624	12	37,298,694,447,42,149,171,53,78,84,112,98,	0,489,1653,2883,4787,5906,7945,9217,10166,13269,13943,23070,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	201782629	201798608	chr1:201782629-201798608	0	+	201782629	201782629	8553170	9	240,447,42,149,171,53,78,84,4143,	0,776,2680,3799,5838,7110,8059,11162,11836,
#Partially deleted in new
chr1	201786439	201808045	chr1:201786439-201808045	0	+	201786439	201808045	789624	7	138,53,78,84,112,122,93,	0,3300,4249,7352,8026,17153,21513,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	201786549	201803706	chr1:201786549-201803706	0	+	201786549	201787705	789624	6	28,116,171,53,3889,114,	0,1103,1918,3190,4139,17043,
#Deleted in new
chr1	201808610	201808702	chr1:201808610-201808702	3	+	201808610	201808610	5263520	1	92,	0,
#Partially deleted in new
chr1	201820454	201829085	chr1:201820454-201829085	1	-	201820454	201820454	8553170	3	182,139,135,	0,1506,8496,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr1	201829140	201884294	chr1:201829140-201884294	3	+	201829209	201876054	789624	24	232,62,87,202,89,87,120,101,59,152,99,107,140,160,227,149,129,276,167,134,123,105,77,8351,	0,18138,18411,19252,22963,23870,25454,25682,25983,26642,27955,29306,29714,34307,37592,39507,40449,41442,42020,43687,45109,45691,46011,46803,
#Partially deleted in new
chr1	201829148	201853073	chr1:201829148-201853073	0	+	201829148	201829148	8553170	7	224,111,62,87,202,89,63,	0,5805,18130,18403,19244,22955,23862,
#Partially deleted in new
chr1	201847294	201850816	chr1:201847294-201850816	0	+	201847294	201847294	8553170	4	46,87,202,369,	0,257,1098,3153,
#Deleted in new
chr1	201863372	201863447	chr1:201863372-201863447	3	+	201863372	201863372	5263520	1	75,	0,
#Partially deleted in new
chr1	201874314	201876373	chr1:201874314-201876373	0	+	201874314	201876232	789624	4	58,105,77,369,	0,517,837,1690,
#Deleted in new
chr1	201888679	201892137	chr1:201888679-201892137	0	+	201888679	201888679	789624	5	102,172,134,168,338,	0,765,1774,2721,3120,
#Deleted in new
chr1	201888707	201892306	chr1:201888707-201892306	3	+	201888994	201891846	789624	5	360,172,134,168,507,	0,737,1746,2693,3092,
#Deleted in new
chr1	201888933	201890493	chr1:201888933-201890493	0	+	201888933	201888933	8553170	2	683,40,	0,1520,
#Deleted in new
chr1	201893841	201899978	chr1:201893841-201899978	0	+	201893841	201893841	8553170	3	71,174,249,	0,5331,5888,
#Partially deleted in new
chr1	201896451	201946587	chr1:201896451-201946587	3	-	201898371	201946340	0	3	1947,1515,508,	0,2785,49628,
#Partially deleted in new
chr1	201896455	201946588	chr1:201896455-201946588	1	-	201898371	201946256	789624	4	1943,192,414,509,	0,2781,3882,49624,
#Deleted in new
chr1	201898099	201899978	chr1:201898099-201899978	3	+	201898099	201898099	8553170	3	177,174,249,	0,1073,1630,
#Partially deleted in new
chr1	201955490	201970661	chr1:201955490-201970661	3	+	201955526	201969554	789624	6	62,100,64,129,111,1193,	0,1790,2020,8125,9942,13978,
#Partially deleted in new
chr1	201955505	201969717	chr1:201955505-201969717	0	+	201955505	201955505	8553170	7	47,100,64,121,129,111,249,	0,1775,2005,7298,8110,9927,13963,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	201955509	201958028	chr1:201955509-201958028	0	+	201955509	201955509	8553170	3	43,100,518,	0,1771,2001,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	201962215	201970351	chr1:201962215-201970351	0	+	201962215	201962215	8553170	3	1529,111,883,	0,3217,7253,
#Deleted in new
chr1	201978460	201978595	chr1:201978460-201978595	3	+	201978460	201978460	8553170	1	135,	0,
#Deleted in new
chr1	201978641	201978949	chr1:201978641-201978949	7	+	201978641	201978641	16724991	1	308,	0,
#Partially deleted in new
chr1	201982371	202001399	chr1:201982371-202001399	0	+	201982371	201982371	8553170	7	66,141,149,117,236,114,24,	0,6532,7011,13775,14947,17530,19004,
#Partially deleted in new
chr1	201982623	202006147	chr1:201982623-202006147	3	+	201982666	202005716	789624	11	490,141,149,117,236,114,113,109,225,143,590,	0,6280,6759,13523,14695,17278,18752,19035,20613,21730,22934,
#Partially deleted in new
chr1	201982651	202006147	chr1:201982651-202006147	1	+	201982666	202005716	789624	10	462,141,149,236,114,113,109,225,143,590,	0,6252,6731,14667,17250,18724,19007,20585,21702,22906,
#Partially deleted in new
chr1	201982756	201997554	chr1:201982756-201997554	0	+	201982756	201996164	789624	4	357,141,117,236,	0,6147,13390,14562,
#Partially deleted in new
chr1	201982818	202001488	chr1:201982818-202001488	0	+	201982818	201996164	789624	5	295,141,117,114,113,	0,6085,13328,17083,18557,
#Partially deleted in new
chr1	201982954	202006147	chr1:201982954-202006147	0	+	201982954	201982954	8553170	10	159,141,263,236,114,113,109,225,143,590,	0,5949,13192,14364,16947,18421,18704,20282,21399,22603,
#Partially deleted in new
chr1	201983329	202001767	chr1:201983329-202001767	0	+	201983462	202001767	789624	8	187,141,149,117,236,114,113,109,	0,5574,6053,12817,13989,16572,18046,18329,
#Partially deleted in new
chr1	201983374	202003420	chr1:201983374-202003420	0	+	201983374	201983374	8553170	8	142,141,149,117,114,113,109,184,	0,5529,6008,12772,16527,18001,18284,19862,
#Partially deleted in new
chr1	201983378	201999945	chr1:201983378-201999945	0	+	201983378	201983378	8553170	5	138,141,263,236,44,	0,5525,12768,13940,16523,
#Partially deleted in new
chr1	201983470	202003318	chr1:201983470-202003318	0	+	201983470	201983470	8553170	8	46,141,117,236,114,113,109,82,	0,5433,12676,13848,16431,17905,18188,19766,
#Partially deleted in new
chr1	201983490	201989530	chr1:201983490-201989530	0	+	201983490	201983490	8553170	3	394,141,148,	0,5413,5892,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	201995695	202010463	chr1:201995695-202010463	3	-	201995695	201995695	8553170	2	4632,664,	0,14104,
#Partially deleted in new
chr1	201996171	202001722	chr1:201996171-202001722	0	+	201996171	202001722	789624	4	92,236,113,64,	0,1147,5204,5487,
#Partially deleted in new
chr1	202000100	202001283	chr1:202000100-202001283	0	-	202000100	202000100	8553170	2	227,273,	0,910,
#Partially deleted in new
chr1	202001260	202003349	chr1:202001260-202003349	0	+	202001260	202001260	8553170	3	228,109,113,	0,398,1976,
#Partially deleted in new
chr1	202001468	202004496	chr1:202001468-202004496	0	+	202001468	202001468	8553170	3	299,225,143,	0,1768,2885,
#Deleted in new
chr1	202003123	202003236	chr1:202003123-202003236	3	+	202003123	202003123	5263520	1	113,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	202007944	202016009	chr1:202007944-202016009	3	+	202011136	202015323	0	8	3355,222,93,120,90,117,196,801,	0,4012,4399,4695,5002,5237,5884,7264,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	202010516	202017188	chr1:202010516-202017188	1	+	202011136	202015323	0	9	190,171,222,93,120,90,117,196,1980,	0,612,1440,1827,2123,2430,2665,3312,4692,
#Partially deleted in new
chr1	202010586	202016009	chr1:202010586-202016009	1	+	202011136	202015323	0	9	234,171,222,93,120,90,117,196,801,	0,542,1370,1757,2053,2360,2595,3242,4622,
#Partially deleted in new
chr1	202010593	202012571	chr1:202010593-202012571	0	+	202010593	202010593	8553170	3	113,171,615,	0,535,1363,
#Partially deleted in new
chr1	202010598	202013268	chr1:202010598-202013268	0	+	202010598	202010598	8553170	5	108,480,120,90,87,	0,1358,2041,2348,2583,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	202010624	202011808	chr1:202010624-202011808	0	+	202010624	202010624	8553170	2	82,680,	0,504,
#Partially deleted in new
chr1	202010643	202013197	chr1:202010643-202013197	0	+	202011136	202013197	789624	7	63,165,222,93,120,90,16,	0,485,1313,1700,1996,2303,2538,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	202011369	202015657	chr1:202011369-202015657	3	+	202011369	202011369	8553170	2	215,772,	0,3516,
#Deleted in new
chr1	202012444	202013276	chr1:202012444-202013276	0	+	202012444	202012444	8553170	3	315,90,95,	0,502,737,
#Deleted in new
chr1	202012568	202012995	chr1:202012568-202012995	0	+	202012568	202012568	8553170	2	191,139,	0,288,
#Partially deleted in new
chr1	202013777	202015794	chr1:202013777-202015794	0	+	202013777	202013777	8553170	2	247,586,	0,1431,
#Deleted in new
chr1	202028605	202028692	chr1:202028605-202028692	7	+	202028605	202028605	16724991	1	87,	0,
#Partially deleted in new
chr1	202039850	202039934	chr1:202039850-202039934	7	+	202039850	202039850	16724991	1	84,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	202070840	202070943	chr1:202070840-202070943	3	+	202070840	202070840	8553170	1	103,	0,
#Partially deleted in new
chr1	202096758	202096978	chr1:202096758-202096978	7	+	202096758	202096758	16724991	1	220,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	202122857	202133592	chr1:202122857-202133592	3	+	202122963	202128556	789624	2	736,5852,	0,4883,
#Partially deleted in new
chr1	202133403	202144741	chr1:202133403-202144741	3	-	202134466	202144572	0	7	1113,71,68,94,74,81,292,	0,1746,2055,2303,4561,4964,11046,
#Partially deleted in new
chr1	202133403	202144743	chr1:202133403-202144743	1	-	202134515	202144572	789624	6	1113,71,94,74,81,294,	0,1746,2303,4561,4964,11046,
#Deleted in new
chr1	202134382	202135608	chr1:202134382-202135608	0	-	202134382	202134382	8553170	3	134,71,150,	0,767,1076,
#Partially deleted in new
chr1	202135201	202138034	chr1:202135201-202138034	0	-	202135201	202135201	8553170	3	19,342,70,	0,257,2763,
#Partially deleted in new
chr1	202147012	202161581	chr1:202147012-202161581	3	-	202148605	202160807	0	10	1687,114,158,111,138,77,85,184,174,1037,	0,3298,5529,6712,7173,8520,10726,11105,12268,13532,
#Partially deleted in new
chr1	202147012	202159991	chr1:202147012-202159991	1	-	202148605	202159519	0	9	1687,114,158,111,138,77,85,184,711,	0,3298,5529,6712,7173,8520,10726,11105,12268,
#Partially deleted in new
chr1	202147014	202160594	chr1:202147014-202160594	0	-	202148605	202159402	0	11	1452,146,114,158,111,138,77,85,184,174,50,	0,1539,3296,5527,6710,7171,8518,10724,11103,12266,13530,
#Partially deleted in new
chr1	202148212	202160608	chr1:202148212-202160608	0	-	202153765	202159402	789624	8	248,119,114,158,86,184,174,64,	0,368,2098,4329,5512,9905,11068,12332,
#Partially deleted in new
chr1	202148288	202160608	chr1:202148288-202160608	0	-	202154315	202159402	789624	10	411,114,158,111,138,77,85,131,174,64,	0,2022,4253,5436,5897,7244,9450,9829,10992,12256,
#Partially deleted in new
chr1	202148438	202160615	chr1:202148438-202160615	0	-	202155585	202159402	789624	9	261,114,158,111,138,77,85,174,71,	0,1872,4103,5286,5747,7094,9300,10842,12106,
#Partially deleted in new
chr1	202148499	202161581	chr1:202148499-202161581	0	-	202148605	202161581	789624	10	200,114,158,111,138,77,85,184,170,195,	0,1811,4042,5225,5686,7033,9239,9618,10781,12887,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	202149850	202158569	chr1:202149850-202158569	0	-	202149850	202149850	8553170	7	574,158,111,138,77,85,452,	0,2691,3874,4335,5682,7888,8267,
#Partially deleted in new
chr1	202152537	202160644	chr1:202152537-202160644	0	-	202152537	202154278	789624	6	162,111,138,77,85,100,	0,1187,1648,2995,5201,8007,
#Partially deleted in new
chr1	202153765	202160578	chr1:202153765-202160578	1	-	202153765	202159402	789624	4	45,184,174,34,	0,4352,5515,6779,
#Partially deleted in new
chr1	202154185	202160615	chr1:202154185-202160615	0	-	202154185	202154185	8553170	5	138,77,85,174,71,	0,1347,3553,5095,6359,
#Partially deleted in new
chr1	202154238	202160602	chr1:202154238-202160602	0	-	202154238	202159339	789624	6	85,77,85,184,61,58,	0,1294,3500,3879,5042,6306,
#Partially deleted in new
chr1	202155536	202160608	chr1:202155536-202160608	0	-	202155536	202159402	789624	5	73,85,184,136,64,	0,2202,2581,3744,5008,
#Partially deleted in new
chr1	202155536	202160608	chr1:202155536-202160608	0	-	202155536	202159402	789624	5	73,82,184,174,64,	0,2202,2581,3744,5008,
#Partially deleted in new
chr1	202155560	202160608	chr1:202155560-202160608	0	-	202155560	202159402	789624	5	49,85,203,174,64,	0,2178,2557,3720,4984,
#Partially deleted in new
chr1	202155580	202160608	chr1:202155580-202160608	0	-	202155580	202159402	789624	5	29,85,184,189,64,	0,2158,2537,3700,4964,
#Partially deleted in new
chr1	202157963	202160605	chr1:202157963-202160605	0	-	202157963	202157963	8553170	3	338,174,61,	0,1317,2581,
#Partially deleted in new
chr1	202158117	202161588	chr1:202158117-202161588	0	-	202158117	202159402	789624	3	184,174,202,	0,1163,3269,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	202158457	202160608	chr1:202158457-202160608	0	-	202158457	202158457	8553170	2	997,64,	0,2087,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr1	202168050	202189353	chr1:202168050-202189353	7	+	202168050	202168050	16724991	22	461,49,269,264,255,246,285,419,279,127,48,94,91,93,98,169,159,137,88,79,166,123,	0,571,1263,1730,3134,3490,8998,9469,12060,13607,13838,15077,15333,15516,16631,18210,18482,18952,19218,19412,20776,21180,
#Partially deleted in new
chr1	202168050	202189296	chr1:202168050-202189296	5	+	202168050	202168050	16724991	29	57,49,272,269,264,255,246,297,481,264,282,145,246,289,91,77,143,146,150,120,68,88,79,77,129,117,164,136,66,	0,571,794,1263,1730,3134,3490,3893,8770,9469,10060,10708,11125,14882,15333,15532,16631,17470,18233,18521,19021,19218,19412,19580,19802,20069,20291,20806,21180,
#Deleted in new
chr1	202183597	202189449	chr1:202183597-202189449	4	+	202183597	202183597	16724991	9	62,169,159,137,88,79,129,147,219,	0,2663,2935,3405,3671,3865,4255,5248,5633,
#Deleted in new
chr1	202186619	202189449	chr1:202186619-202189449	4	+	202186619	202186619	16724991	7	72,68,88,79,129,166,219,	0,452,649,843,1233,2207,2611,
#Deleted in new
chr1	202186854	202189455	chr1:202186854-202189455	5	+	202186854	202186854	16724991	6	285,88,79,129,147,225,	0,414,608,998,1991,2376,
#Partially deleted in new
chr1	202193900	202319781	chr1:202193900-202319781	1	+	202193989	202319207	789624	18	301,72,72,72,216,72,69,72,72,69,72,66,72,72,126,161,81,1830,	0,31522,34035,42021,82405,86880,103607,106948,107263,109378,110658,111783,112967,113429,115150,116296,120901,124051,
#Partially deleted in new
chr1	202203735	202319781	chr1:202203735-202319781	3	+	202203819	202319207	789624	18	140,72,72,72,216,72,69,72,72,69,72,66,72,72,126,161,81,1830,	0,21687,24200,32186,72570,77045,93772,97113,97428,99543,100823,101948,103132,103594,105315,106461,111066,114216,
#Partially deleted in new
chr1	202203776	202319690	chr1:202203776-202319690	0	+	202203819	202306831	789624	18	99,72,72,72,216,72,69,72,72,69,72,66,175,72,126,161,81,1739,	0,21646,24159,32145,72529,77004,93731,97072,97387,99502,100782,101907,102988,103553,105274,106420,111025,114175,
#Partially deleted in new
chr1	202210707	202305749	chr1:202210707-202305749	0	+	202225432	202305749	789624	9	84,72,72,72,216,69,69,72,66,	0,14715,17228,25214,65598,86800,92571,93851,94976,
#Partially deleted in new
chr1	202214154	202319207	chr1:202214154-202319207	1	+	202214154	202319207	789624	16	83,72,72,72,69,72,72,69,72,66,72,72,126,161,81,1256,	0,11268,13781,21767,83353,86694,87009,89124,90404,91529,92713,93175,94896,96042,100647,103797,
#Partially deleted in new
chr1	202225422	202236334	chr1:202225422-202236334	0	+	202225422	202225422	8553170	3	72,72,413,	0,2513,10499,
#Partially deleted in new
chr1	202276300	202281013	chr1:202276300-202281013	0	+	202276300	202276300	8553170	2	221,233,	0,4480,
#Partially deleted in new
chr1	202331656	202341966	chr1:202331656-202341966	3	-	202331834	202335754	0	7	304,84,99,106,70,173,72,	0,1353,1580,1793,3332,3989,10238,
#Partially deleted in new
chr1	202331656	202341980	chr1:202331656-202341980	0	-	202331656	202331656	8553170	6	304,326,106,70,173,86,	0,1353,1793,3332,3989,10238,
#Partially deleted in new
chr1	202331656	202341970	chr1:202331656-202341970	0	-	202331656	202331656	8553170	6	304,84,99,106,830,76,	0,1353,1580,1793,3332,10238,
#Partially deleted in new
chr1	202331656	202341936	chr1:202331656-202341936	1	-	202331834	202335754	0	7	304,84,99,106,70,173,42,	0,1353,1580,1793,3332,3989,10238,
#Partially deleted in new
chr1	202331737	202341959	chr1:202331737-202341959	0	-	202335027	202335754	789624	7	223,84,99,106,70,177,65,	0,1272,1499,1712,3251,3904,10157,
#Partially deleted in new
chr1	202331954	202341936	chr1:202331954-202341936	0	-	202331954	202331954	8553170	5	6,326,106,177,42,	0,1055,1495,3687,9940,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr1	202348698	202592706	chr1:202348698-202592706	1	+	202348851	202580560	789624	25	444,131,119,160,145,75,80,140,113,204,83,126,183,183,91,204,190,113,42,17,145,105,54,51,12233,	0,68088,73921,76867,78341,80156,82032,82781,85957,89122,92007,93748,96347,100290,139834,144415,146594,146871,148082,210178,214079,215744,219079,220448,231775,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr1	202348698	202592706	chr1:202348698-202592706	3	+	202348851	202580560	789624	24	444,131,119,160,145,75,80,140,113,204,83,126,183,91,204,190,113,42,17,145,105,54,51,12233,	0,68088,73921,76867,78341,80156,82032,82781,85957,89122,92007,93748,100290,139834,144415,146594,146871,148082,210178,214079,215744,219079,220448,231775,
#Partially deleted in new
chr1	202348719	202438242	chr1:202348719-202438242	1	+	202348851	202438114	789624	10	423,131,119,160,145,75,80,140,113,422,	0,68067,73900,76846,78320,80135,82011,82760,85936,89101,
#Partially deleted in new
chr1	202348727	202438242	chr1:202348727-202438242	1	+	202348851	202437840	789624	9	415,131,119,160,145,75,80,140,422,	0,68059,73892,76838,78312,80127,82003,82752,89093,
#Partially deleted in new
chr1	202348727	202438242	chr1:202348727-202438242	0	+	202348851	202425572	789624	9	415,131,160,145,75,80,140,113,422,	0,68059,76838,78312,80127,82003,82752,85928,89093,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	202369525	202370145	chr1:202369525-202370145	7	-	202369525	202369525	16724991	2	274,57,	0,563,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	202410107	202410207	chr1:202410107-202410207	3	-	202410107	202410107	8553170	1	100,	0,
#Partially deleted in new
chr1	202416830	202434763	chr1:202416830-202434763	0	+	202416830	202434763	789624	6	87,145,75,80,140,108,	0,10209,12024,13900,14649,17825,
#Partially deleted in new
chr1	202428534	202434768	chr1:202428534-202434768	0	+	202428534	202428534	8553170	4	395,80,140,113,	0,2196,2945,6121,
#Deleted in new
chr1	202437819	202438623	chr1:202437819-202438623	0	+	202437819	202437819	8553170	2	205,177,	0,627,
#Deleted in new
chr1	202438395	202439566	chr1:202438395-202439566	7	+	202438395	202438395	16724991	1	1171,	0,
#Deleted in new
chr1	202439494	202439957	chr1:202439494-202439957	5	+	202439494	202439494	16724991	1	463,	0,
#Partially deleted in new
chr1	202442525	202449097	chr1:202442525-202449097	0	+	202442525	202443102	789624	4	47,41,183,109,	0,561,2520,6463,
#Partially deleted in new
chr1	202448283	202502909	chr1:202448283-202502909	0	+	202448283	202448283	8553170	8	307,183,91,204,190,113,42,1051,	0,705,40249,44830,47009,47286,48497,53575,
#Partially deleted in new
chr1	202462742	202581152	chr1:202462742-202581152	1	+	202495469	202575136	789624	13	355,91,204,190,113,42,17,145,105,54,51,181,679,	0,25790,30371,32550,32827,34038,96134,100035,101700,105035,106404,112259,117731,
#Partially deleted in new
chr1	202462742	202581152	chr1:202462742-202581152	1	+	202495469	202580560	789624	12	355,91,204,190,113,42,17,145,105,54,51,679,	0,25790,30371,32550,32827,34038,96134,100035,101700,105035,106404,117731,
#Deleted in new
chr1	202471863	202472117	chr1:202471863-202472117	7	-	202471863	202471863	16724991	1	254,	0,
#Partially deleted in new
chr1	202496818	202564479	chr1:202496818-202564479	0	+	202496818	202501879	789624	5	4,147,17,145,37,	0,5040,62058,65959,67624,
#Deleted in new
chr1	202527309	202527427	chr1:202527309-202527427	3	-	202527309	202527309	8553170	1	118,	0,
#Partially deleted in new
chr1	202539839	202580577	chr1:202539839-202580577	1	+	202540139	202580560	789624	7	402,17,145,105,54,51,104,	0,19037,22938,24603,27938,29307,40634,
#Partially deleted in new
chr1	202558617	202567827	chr1:202558617-202567827	0	+	202558617	202558617	8553170	4	276,145,105,50,	0,4160,5825,9160,
#Partially deleted in new
chr1	202567423	202580838	chr1:202567423-202580838	0	+	202567423	202567423	8553170	4	94,54,51,365,	0,354,1723,13050,
#Partially deleted in new
chr1	202567517	202580842	chr1:202567517-202580842	0	+	202567517	202567517	8553170	4	80,51,51,369,	0,263,1629,12956,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	202574917	202577250	chr1:202574917-202577250	0	+	202574917	202574917	8553170	1	2333,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	202590595	202643453	chr1:202590595-202643453	1	-	202596756	202605772	789624	9	6368,134,118,168,168,120,167,195,176,	0,8622,9761,11294,11782,12403,13859,14999,52682,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	202590595	202710417	chr1:202590595-202710417	3	-	202596756	202605772	789624	9	6368,134,118,168,168,120,167,195,160,	0,8622,9761,11294,11782,12403,13859,14999,119662,
#Deleted in new
chr1	202604267	202605293	chr1:202604267-202605293	3	+	202604267	202604267	8553170	2	68,246,	0,780,
#Deleted in new
chr1	202632427	202632911	chr1:202632427-202632911	3	+	202632427	202632427	8553170	2	86,279,	0,205,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr1	202724494	202809470	chr1:202724494-202809470	3	-	202729035	202808305	0	27	4679,321,155,112,486,159,180,139,356,115,151,125,182,195,120,163,182,159,120,159,110,97,135,171,123,78,1369,	0,5212,6414,7333,8906,10934,11718,16179,16872,17896,18160,21363,21647,24450,26164,28410,30776,31863,33896,35920,38204,39554,42431,48623,50118,52522,83607,
#Deleted in new
chr1	202724713	202729715	chr1:202724713-202729715	0	-	202726419	202729715	8553170	2	1790,9,	0,4993,
#Partially deleted in new
chr1	202724886	202808473	chr1:202724886-202808473	1	-	202729649	202808305	8553170	26	5141,155,112,486,159,180,139,356,115,151,125,182,195,120,163,182,159,120,159,110,97,135,171,123,78,372,	0,6022,6941,8514,10542,11326,15787,16480,17504,17768,20971,21255,24058,25772,28018,30384,31471,33504,35528,37812,39162,42039,48231,49726,52130,83215,
#Deleted in new
chr1	202727403	202734315	chr1:202727403-202734315	0	-	202727403	202727403	8553170	4	2624,155,112,915,	0,3505,4424,5997,
#Deleted in new
chr1	202727403	202730544	chr1:202727403-202730544	0	-	202727403	202727403	8553170	1	3141,	0,
#Partially deleted in new
chr1	202727404	202808049	chr1:202727404-202808049	0	-	202727404	202727404	8553170	27	1769,321,155,112,486,159,180,139,356,115,151,125,182,195,120,163,182,159,120,159,110,97,135,171,123,78,87,	0,2302,3504,4423,5996,8024,8808,13269,13962,14986,15250,18453,18737,21540,23254,25500,27866,28953,30986,33010,35294,36644,39521,45713,47208,49612,80558,
#Partially deleted in new
chr1	202727411	202808052	chr1:202727411-202808052	0	-	202727411	202727411	8553170	26	2616,155,112,486,159,180,139,356,115,151,125,182,195,120,163,182,159,120,159,110,97,135,171,123,78,90,	0,3497,4416,5989,8017,8801,13262,13955,14979,15243,18446,18730,21533,23247,25493,27859,28946,30979,33003,35287,36637,39514,45706,47201,49605,80551,
#Partially deleted in new
chr1	202727416	202745912	chr1:202727416-202745912	0	-	202727416	202727416	8553170	11	1757,321,1031,486,159,180,139,356,115,151,55,	0,2290,3492,5984,8012,8796,13257,13950,14974,15238,18441,
#Deleted in new
chr1	202727426	202733427	chr1:202727426-202733427	0	-	202727426	202727426	8553170	4	1747,1357,112,27,	0,2280,4401,5974,
#Partially deleted in new
chr1	202727444	202808481	chr1:202727444-202808481	1	-	202729453	202808305	8553170	27	2030,321,155,112,486,159,180,139,356,115,151,125,182,195,120,163,182,159,120,159,110,97,135,171,123,78,380,	0,2262,3464,4383,5956,7984,8768,13229,13922,14946,15210,18413,18697,21500,23214,25460,27826,28913,30946,32970,35254,36604,39481,45673,47168,49572,80657,
#Partially deleted in new
chr1	202727444	202808416	chr1:202727444-202808416	1	-	202729035	202808305	8553170	26	1729,321,155,112,486,159,180,139,356,115,151,125,182,195,120,163,182,159,120,159,110,97,171,123,78,315,	0,2262,3464,4383,5956,7984,8768,13229,13922,14946,15210,18413,18697,21500,23214,25460,27826,28913,30946,32970,35254,36604,45673,47168,49572,80657,
#Partially deleted in new
chr1	202727447	202808487	chr1:202727447-202808487	1	-	202729035	202808305	8553170	27	1726,321,155,112,486,159,180,139,356,115,151,125,182,195,120,163,182,159,120,159,110,97,135,171,123,78,371,	0,2259,3461,4380,5953,7981,8765,13226,13919,14943,15207,18410,18694,21497,23211,25457,27823,28910,30943,32967,35251,36601,39478,45670,47165,49569,80669,
#Partially deleted in new
chr1	202727493	202747565	chr1:202727493-202747565	0	-	202727493	202727493	8553170	13	1680,321,155,112,486,159,180,139,356,115,151,125,1424,	0,2213,3415,4334,5907,7935,8719,13180,13873,14897,15161,18364,18648,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	202727582	202743304	chr1:202727582-202743304	0	-	202727582	202727582	8553170	10	1591,321,155,2059,159,180,139,356,115,650,	0,2124,3326,4245,7846,8630,13091,13784,14808,15072,
#Partially deleted in new
chr1	202727674	202808421	chr1:202727674-202808421	1	-	202729058	202808305	8553170	26	1429,321,155,112,486,159,180,139,356,115,151,125,182,195,120,163,182,159,120,159,110,97,135,171,78,320,	0,2032,3234,4153,5726,7754,8538,12999,13692,14716,14980,18183,18467,21270,22984,25230,27596,28683,30716,32740,35024,36374,39251,45443,49342,80427,
#Deleted in new
chr1	202728203	202732056	chr1:202728203-202732056	0	-	202728203	202728203	8553170	2	1824,1148,	0,2705,
#Partially deleted in new
chr1	202728290	202808470	chr1:202728290-202808470	1	-	202729035	202808305	8553170	26	883,321,155,112,486,159,180,139,356,115,151,125,182,195,120,163,182,159,120,159,110,97,135,171,78,369,	0,1416,2618,3537,5110,7138,7922,12383,13076,14100,14364,17567,17851,20654,22368,24614,26980,28067,30100,32124,34408,35758,38635,44827,48726,79811,
#Partially deleted in new
chr1	202728447	202746604	chr1:202728447-202746604	0	-	202728447	202728447	8553170	13	726,321,155,112,486,159,180,139,177,115,151,125,463,	0,1259,2461,3380,4953,6981,7765,12226,13098,13943,14207,17410,17694,
#Partially deleted in new
chr1	202728480	202808481	chr1:202728480-202808481	0	-	202773119	202808305	8553170	27	693,321,155,112,486,159,180,139,356,115,151,125,182,195,120,163,182,159,120,159,110,97,135,167,123,78,380,	0,1226,2428,3347,4920,6948,7732,12193,12886,13910,14174,17377,17661,20464,22178,24424,26790,27877,29910,31934,34218,35568,38445,44637,46132,48536,79621,
#Deleted in new
chr1	202728614	202734272	chr1:202728614-202734272	0	-	202728614	202728614	8553170	5	559,321,155,112,872,	0,1092,2294,3213,4786,
#Partially deleted in new
chr1	202728697	202750702	chr1:202728697-202750702	0	-	202740791	202750702	8553170	14	1330,155,112,486,159,180,139,177,115,151,125,182,195,44,	0,2211,3130,4703,6731,7515,11976,12848,13693,13957,17160,17444,20247,21961,
#Partially deleted in new
chr1	202729904	202807348	chr1:202729904-202807348	0	-	202729904	202773219	789624	26	123,155,112,486,159,180,139,356,115,151,125,182,195,120,163,182,159,120,159,110,97,135,171,123,78,372,	0,1004,1923,3496,5524,6308,10769,11462,12486,12750,15953,16237,19040,20754,23000,25366,26453,28486,30510,32794,34144,37021,43213,44708,47112,77072,
#Deleted in new
chr1	202735171	202736240	chr1:202735171-202736240	0	-	202735171	202735171	8553170	2	416,28,	0,1041,
#Partially deleted in new
chr1	202735504	202777581	chr1:202735504-202777581	0	-	202735504	202735504	8553170	21	83,180,139,356,115,151,125,182,195,120,163,182,159,120,159,110,97,135,171,123,565,	0,708,5169,5862,6886,7150,10353,10637,13440,15154,17400,19766,20853,22886,24910,27194,28544,31421,37613,39108,41512,
#Partially deleted in new
chr1	202745554	202755370	chr1:202745554-202755370	0	-	202745849	202755370	8553170	6	428,182,195,120,163,100,	0,587,3390,5104,7350,9716,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	202748396	202759324	chr1:202748396-202759324	0	-	202748396	202748396	8553170	6	743,120,163,182,159,934,	0,2262,4508,6874,7961,9994,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	202753030	202758952	chr1:202753030-202758952	0	-	202753030	202753030	8553170	5	37,182,159,120,76,	0,2240,3327,5360,5846,
#Partially deleted in new
chr1	202754996	202762945	chr1:202754996-202762945	0	-	202754996	202754996	8553170	5	456,159,120,159,247,	0,1361,3394,5418,7702,
#Partially deleted in new
chr1	202758268	202760523	chr1:202758268-202760523	0	-	202758268	202758268	8553170	2	242,109,	0,2146,
#Partially deleted in new
chr1	202758439	202808114	chr1:202758439-202808114	0	-	202758439	202808114	8553170	9	71,159,110,97,126,171,123,78,13,	0,1975,4259,5609,8486,14678,16173,18577,49662,
#Partially deleted in new
chr1	202760529	202767209	chr1:202760529-202767209	0	-	202760529	202760529	8553170	4	44,110,97,284,	0,2169,3519,6396,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	202764073	202808433	chr1:202764073-202808433	0	-	202764073	202764073	8553170	5	2987,171,123,78,332,	0,9044,10539,12943,44028,
#Deleted in new
chr1	202767228	202767418	chr1:202767228-202767418	7	-	202767228	202767228	16724991	1	190,	0,
#Duplicated in new
chr1	202770096	202808487	chr1:202770096-202808487	1	-	202773045	202808305	8553170	4	3192,123,78,386,	0,4516,6920,38005,
#Duplicated in new
chr1	202770925	202808439	chr1:202770925-202808439	1	-	202772768	202808305	8553170	4	2128,123,78,338,	0,3687,6091,37176,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	202772694	202808216	chr1:202772694-202808216	0	-	202773045	202808216	8553170	3	594,78,115,	0,4322,35407,
#Partially deleted in new
chr1	202773188	202808449	chr1:202773188-202808449	0	-	202773188	202808305	8553170	3	100,123,348,	0,1424,34913,
#Partially deleted in new
chr1	202773216	202806751	chr1:202773216-202806751	0	-	202773216	202773216	8553170	4	72,123,78,262,	0,1396,3800,33273,
#Deleted in new
chr1	202796029	202797094	chr1:202796029-202797094	7	+	202796029	202796029	16724991	1	1065,	0,
#Deleted in new
chr1	202810237	202810829	chr1:202810237-202810829	3	-	202810237	202810237	8553170	1	592,	0,
#Deleted in new
chr1	202810953	202812156	chr1:202810953-202812156	0	+	202810953	202810953	8553170	2	417,134,	0,1069,
#Deleted in new
chr1	202810961	202811913	chr1:202810961-202811913	3	+	202810961	202810961	789624	2	409,339,	0,613,
#Deleted in new
chr1	202810961	202811913	chr1:202810961-202811913	0	+	202810961	202810961	789624	2	409,225,	0,727,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	202820265	202827225	chr1:202820265-202827225	7	+	202820265	202820265	16724991	3	120,650,2040,	0,2991,4920,
#Deleted in new
chr1	202825185	202826320	chr1:202825185-202826320	5	+	202825185	202825185	16724991	1	1135,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	202851827	202861608	chr1:202851827-202861608	7	-	202851827	202851827	16724991	3	1453,221,161,	0,7054,9620,
#Partially deleted in new
chr1	202852961	202859222	chr1:202852961-202859222	4	-	202852961	202852961	16724991	2	319,341,	0,5920,
#Partially deleted in new
chr1	202852990	202859099	chr1:202852990-202859099	5	-	202852990	202852990	16724991	4	290,605,149,218,	0,2561,4656,5891,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	202857927	202861620	chr1:202857927-202861620	5	-	202857927	202857927	16724991	3	237,221,173,	0,954,3520,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	202861753	202875241	chr1:202861753-202875241	7	+	202861753	202861753	16724991	3	56,80,2185,	0,10446,11303,
#Partially deleted in new
chr1	202873293	202874326	chr1:202873293-202874326	5	+	202873293	202873293	16724991	1	1033,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	202878956	202889135	chr1:202878956-202889135	3	-	202880977	202889098	0	2	2267,163,	0,10016,
#Partially deleted in new
chr1	202891099	202927262	chr1:202891099-202927262	3	-	202892532	202925162	0	12	1560,187,99,159,196,107,115,150,218,154,240,174,	0,2139,3084,3491,4422,5754,17910,19954,27071,28655,33868,35989,
#Partially deleted in new
chr1	202891115	202909161	chr1:202891115-202909161	1	-	202892636	202909040	789624	6	1544,99,159,196,107,152,	0,3068,3475,4406,5738,17894,
#Partially deleted in new
chr1	202909009	202928636	chr1:202909009-202928636	0	-	202909009	202928549	789624	6	115,150,218,154,240,156,	0,2044,9161,10745,15958,19471,
#Deleted in new
chr1	202911811	202912729	chr1:202911811-202912729	7	+	202911811	202911811	16724991	1	918,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	202914879	202914980	chr1:202914879-202914980	3	-	202914879	202914879	8553170	1	101,	0,
#Partially deleted in new
chr1	202940822	202958389	chr1:202940822-202958389	3	-	202941572	202951070	0	8	879,194,188,187,172,117,235,205,	0,1202,2935,4160,5616,7481,10107,17362,
#Partially deleted in new
chr1	202940825	202944796	chr1:202940825-202944796	0	-	202940825	202940825	8553170	3	876,194,1039,	0,1199,2932,
#Partially deleted in new
chr1	202941489	202958264	chr1:202941489-202958264	1	-	202943777	202951070	789624	7	212,194,106,172,117,235,80,	0,535,2268,4949,6814,9440,16695,
#Partially deleted in new
chr1	202943763	202958572	chr1:202943763-202958572	0	-	202943763	202951070	789624	7	182,187,172,117,235,67,98,	0,1219,2675,4540,7166,10477,14711,
#Partially deleted in new
chr1	202944982	202958285	chr1:202944982-202958285	0	-	202944982	202951070	789624	6	187,172,117,235,67,101,	0,1456,3321,5947,9258,13202,
#Partially deleted in new
chr1	202961868	202967280	chr1:202961868-202967280	3	-	202962526	202967205	789624	9	831,100,86,84,130,107,73,150,90,	0,1197,1773,2743,3502,4018,4659,4880,5322,
#Deleted in new
chr1	202961875	202965384	chr1:202961875-202965384	0	-	202961875	202961875	8553170	2	1290,1743,	0,1766,
#Partially deleted in new
chr1	202962546	202967243	chr1:202962546-202967243	0	-	202962546	202962546	8553170	8	153,100,86,84,130,107,150,53,	0,519,1095,2065,2824,3340,4202,4644,
#Deleted in new
chr1	202962549	202963559	chr1:202962549-202963559	0	-	202962549	202962549	8553170	2	150,494,	0,516,
#Partially deleted in new
chr1	202962925	202966560	chr1:202962925-202966560	0	-	202962925	202966560	789624	6	240,86,84,130,107,33,	0,716,1686,2445,2961,3602,
#Partially deleted in new
chr1	202965370	202967275	chr1:202965370-202967275	0	-	202965370	202965370	8553170	5	130,223,73,150,85,	0,516,1157,1378,1820,
#Deleted in new
chr1	202965886	202967225	chr1:202965886-202967225	0	-	202965886	202965886	8553170	3	714,150,35,	0,862,1304,
#Deleted in new
chr1	202986556	202988582	chr1:202986556-202988582	7	-	202986556	202986556	16724991	2	1106,133,	0,1893,
#Deleted in new
chr1	202987276	202988482	chr1:202987276-202988482	4	-	202987276	202987276	16724991	2	386,33,	0,1173,
#Partially deleted in new
chr1	202999737	203000352	chr1:202999737-203000352	7	+	202999737	202999737	16724991	2	18,292,	0,323,
#Partially deleted in new
chr1	203007385	203024848	chr1:203007385-203024848	3	+	203007465	203023040	789624	8	189,90,168,160,181,81,156,1994,	0,388,1257,7503,8574,11095,13407,15469,
#Partially deleted in new
chr1	203007402	203016094	chr1:203007402-203016094	0	+	203007402	203007402	8553170	4	461,168,160,135,	0,1240,7486,8557,
#Partially deleted in new
chr1	203007773	203017919	chr1:203007773-203017919	0	+	203007773	203007773	8553170	5	90,168,160,181,164,	0,869,7115,8186,9982,
#Partially deleted in new
chr1	203008739	203015572	chr1:203008739-203015572	0	+	203008739	203008739	8553170	2	71,684,	0,6149,
#Partially deleted in new
chr1	203015839	203020801	chr1:203015839-203020801	0	+	203015839	203015839	8553170	4	301,164,81,9,	0,1916,2641,4953,
#Partially deleted in new
chr1	203026497	203078736	chr1:203026497-203078736	3	+	203039008	203076390	789624	29	128,633,102,165,75,90,192,147,135,84,132,92,109,209,241,36,134,167,94,82,201,63,27,176,98,176,69,181,2396,	0,12112,16899,17433,17881,18198,18870,19343,19750,21729,22085,23178,25271,27255,28934,29622,29877,30286,32680,33272,33719,34472,35154,37330,41197,41955,45194,49079,49843,
#Partially deleted in new
chr1	203034483	203078735	chr1:203034483-203078735	1	+	203051775	203076390	789624	33	106,78,84,82,29,296,102,165,75,90,192,147,135,84,144,63,92,109,209,241,36,134,167,94,82,201,63,176,98,176,69,181,2395,	0,219,755,1075,2690,4463,8913,9447,9895,10212,10884,11357,11764,13743,14087,14434,15192,17285,19269,20948,21636,21891,22300,24694,25286,25733,26486,29344,33211,33969,37208,41093,41857,
#Partially deleted in new
chr1	203034483	203078740	chr1:203034483-203078740	1	+	203039008	203076390	789624	35	106,78,84,82,29,296,102,165,75,90,192,147,135,84,144,63,92,109,65,66,241,36,134,167,94,82,201,63,27,176,98,176,69,181,2400,	0,219,755,1075,2690,4463,8913,9447,9895,10212,10884,11357,11764,13743,14087,14434,15192,17285,19312,19574,20948,21636,21891,22300,24694,25286,25733,26486,27168,29344,33211,33969,37208,41093,41857,
#Deleted in new
chr1	203045408	203046507	chr1:203045408-203046507	0	+	203045408	203045408	8553170	3	151,147,260,	0,432,839,
#Partially deleted in new
chr1	203045465	203076497	chr1:203045465-203076497	0	+	203045465	203076390	789624	24	94,147,135,84,132,63,92,109,209,241,36,134,167,94,82,201,63,27,176,98,176,69,181,157,	0,375,782,2761,3117,3452,4210,6303,8287,9966,10654,10909,11318,13712,14304,14751,15504,16186,18362,22229,22987,26226,30111,30875,
#Partially deleted in new
chr1	203051182	203078736	chr1:203051182-203078736	1	+	203051775	203076390	789624	17	695,209,241,36,134,167,94,82,201,63,27,176,98,176,69,181,2396,	0,2570,4249,4937,5192,5601,7995,8587,9034,9787,10469,12645,16512,17270,20509,24394,25158,
#Partially deleted in new
chr1	203051239	203076953	chr1:203051239-203076953	1	+	203051775	203076390	789624	16	638,209,241,36,134,167,94,82,201,63,176,98,176,69,181,613,	0,2513,4192,4880,5135,5544,7938,8530,8977,9730,12588,16455,17213,20452,24337,25101,
#Partially deleted in new
chr1	203053702	203055557	chr1:203053702-203055557	0	+	203053702	203053702	8553170	2	259,126,	0,1729,
#Partially deleted in new
chr1	203053745	203056806	chr1:203053745-203056806	0	+	203053745	203056806	789624	5	216,241,36,57,23,	0,1686,2374,2706,3038,
#Partially deleted in new
chr1	203061365	203067765	chr1:203061365-203067765	0	+	203061365	203061365	8553170	3	313,176,71,	0,2462,6329,
#Partially deleted in new
chr1	203062958	203078735	chr1:203062958-203078735	0	+	203062958	203062958	8553170	5	1045,98,176,69,3159,	0,4736,5494,8733,12618,
#Deleted in new
chr1	203067444	203068600	chr1:203067444-203068600	0	+	203067444	203067444	8553170	2	348,148,	0,1008,
#Deleted in new
chr1	203076002	203076981	chr1:203076002-203076981	0	+	203076002	203076002	8553170	2	74,502,	0,477,
#Deleted in new
chr1	203083131	203086036	chr1:203083131-203086036	3	-	203083909	203085961	789624	3	900,82,546,	0,1515,2359,
#Partially deleted in new
chr1	203090653	203167404	chr1:203090653-203167404	3	+	203128841	203165900	0	6	81,18,100,155,398,2144,	0,1039,37175,37624,38131,74607,
#Partially deleted in new
chr1	203127064	203167405	chr1:203127064-203167405	1	+	203128841	203165900	0	3	864,398,2145,	0,1720,38196,
#Deleted in new
chr1	203127258	203127954	chr1:203127258-203127954	3	-	203127258	203127258	8553170	2	232,148,	0,548,
#Partially deleted in new
chr1	203127707	203167405	chr1:203127707-203167405	1	+	203128841	203165900	0	4	221,155,398,2145,	0,570,1077,37553,
#Partially deleted in new
chr1	203127707	203165089	chr1:203127707-203165089	1	+	203128841	203165089	0	3	221,398,34,	0,1077,37348,
#Partially deleted in new
chr1	203128305	203166749	chr1:203128305-203166749	1	+	203128841	203165092	0	3	127,398,1694,	0,479,36750,
#Partially deleted in new
chr1	203128372	203166062	chr1:203128372-203166062	1	+	203165267	203165900	789624	2	60,802,	0,36888,
#Partially deleted in new
chr1	203129633	203165741	chr1:203129633-203165741	0	+	203129633	203129633	8553170	2	65,686,	0,35422,
#Partially deleted in new
chr1	203144693	203152579	chr1:203144693-203152579	3	-	203144693	203144693	8553170	4	198,38,87,30,	0,343,5272,7856,
#Partially deleted in new
chr1	203150631	203166749	chr1:203150631-203166749	0	+	203150631	203150631	8553170	2	147,1489,	0,14629,
#Partially deleted in new
chr1	203152645	203166115	chr1:203152645-203166115	0	+	203152645	203152645	8553170	2	113,855,	0,12615,
#Partially deleted in new
chr1	203167810	203175813	chr1:203167810-203175813	3	-	203168658	203175755	789624	11	281,49,187,137,160,140,196,89,168,135,263,	0,816,1095,1442,2480,3250,3572,4141,6619,7516,7740,
#Partially deleted in new
chr1	203167810	203175783	chr1:203167810-203175783	1	-	203168658	203175755	789624	13	281,49,186,4,9,122,160,140,196,89,168,135,233,	0,816,1095,1442,1447,1457,2480,3250,3572,4141,6619,7516,7740,
#Partially deleted in new
chr1	203178930	203186749	chr1:203178930-203186749	3	-	203179444	203186623	0	10	655,117,183,124,122,151,57,202,30,151,	0,830,1539,2231,3800,4710,5645,6253,7385,7668,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	203178930	203182134	chr1:203178930-203182134	0	-	203178930	203178930	8553170	2	947,973,	0,2231,
#Partially deleted in new
chr1	203178980	203182805	chr1:203178980-203182805	0	-	203179444	203182805	789624	4	605,117,124,75,	0,780,2181,3750,
#Deleted in new
chr1	203179133	203180133	chr1:203179133-203180133	0	-	203179133	203179133	8553170	2	452,373,	0,627,
#Partially deleted in new
chr1	203179997	203182841	chr1:203179997-203182841	0	-	203179997	203179997	8553170	3	655,124,111,	0,1164,2733,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	203212826	203272809	chr1:203212826-203272809	0	-	203212826	203212826	8553170	12	219,127,114,186,124,166,57,202,30,58,32,4292,	0,4912,6389,6837,9375,10668,12221,12842,15706,27636,27800,55691,
#Partially deleted in new
chr1	203212834	203218021	chr1:203212834-203218021	0	-	203212834	203212834	8553170	2	211,283,	0,4904,
#Partially deleted in new
chr1	203216078	203229671	chr1:203216078-203229671	3	-	203216888	203229636	0	11	1055,127,114,186,124,125,166,57,202,30,60,	0,1660,3137,3585,6123,7056,7416,8969,9590,12454,13533,
#Partially deleted in new
chr1	203216669	203229671	chr1:203216669-203229671	1	-	203216888	203229636	0	10	464,127,114,186,124,125,166,202,30,60,	0,1069,2546,2994,5532,6465,6825,8999,11863,12942,
#Partially deleted in new
chr1	203216669	203229645	chr1:203216669-203229645	0	-	203217364	203229636	0	12	464,71,127,114,186,124,125,166,57,202,30,34,	0,632,1069,2546,2994,5532,6465,6825,8378,8999,11863,12942,
#Partially deleted in new
chr1	203216947	203229671	chr1:203216947-203229671	0	-	203218034	203229636	789624	13	186,71,127,157,114,186,124,125,166,57,202,30,60,	0,354,791,987,2268,2716,5254,6187,6547,8100,8721,11585,12664,
#Partially deleted in new
chr1	203219573	203222310	chr1:203219573-203222310	0	-	203219573	203219573	8553170	2	276,109,	0,2628,
#Partially deleted in new
chr1	203240329	203273641	chr1:203240329-203273641	0	-	203240329	203240329	8553170	3	99,32,266,	0,297,33046,
#Deleted in new
chr1	203255742	203256475	chr1:203255742-203256475	7	+	203255742	203255742	16724991	1	733,	0,
#Deleted in new
chr1	203287151	203288801	chr1:203287151-203288801	3	+	203287151	203287151	789624	3	160,318,297,	0,837,1353,
#Deleted in new
chr1	203287769	203288534	chr1:203287769-203288534	0	+	203287769	203287769	8553170	3	62,262,30,	0,219,735,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	203298757	203305309	chr1:203298757-203305309	3	-	203298757	203298757	789624	3	1890,192,457,	0,2332,6095,
#Partially deleted in new
chr1	203300513	203304548	chr1:203300513-203304548	0	-	203300513	203300513	8553170	3	134,192,29,	0,576,4006,
#Partially deleted in new
chr1	203301165	203305259	chr1:203301165-203305259	0	-	203301165	203301165	8553170	3	116,186,203,	0,3354,3891,
#Deleted in new
chr1	203305490	203309569	chr1:203305490-203309569	0	+	203305606	203307438	0	3	258,585,432,	0,1613,3647,
#Deleted in new
chr1	203305535	203309602	chr1:203305535-203309602	3	+	203305606	203307438	0	2	213,2499,	0,1568,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	203318995	203319099	chr1:203318995-203319099	3	-	203318995	203318995	8553170	1	104,	0,
#Partially deleted in new
chr1	203340627	203351489	chr1:203340627-203351489	3	-	203342342	203348270	0	3	1867,986,457,	0,6664,10405,
#Partially deleted in new
chr1	203340660	203351758	chr1:203340660-203351758	1	-	203342342	203348003	8553170	3	1834,765,91,	0,6631,11007,
#Partially deleted in new
chr1	203341336	203351088	chr1:203341336-203351088	0	-	203341336	203341336	8553170	3	493,168,56,	0,990,9696,
#Partially deleted in new
chr1	203342182	203351086	chr1:203342182-203351086	0	-	203342182	203342182	8553170	2	312,54,	0,8850,
#Deleted in new
chr1	203353364	203353651	chr1:203353364-203353651	7	-	203353364	203353364	16724991	1	287,	0,
#Deleted in new
chr1	203400265	203400581	chr1:203400265-203400581	7	-	203400265	203400265	16724991	1	316,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	203475827	203491352	chr1:203475827-203491352	3	+	203483184	203486881	789624	3	111,989,4647,	0,7341,10878,
#Partially deleted in new
chr1	203494142	203508864	chr1:203494142-203508864	3	+	203496005	203503720	789624	8	75,272,139,159,203,96,196,219,	0,1822,2834,4538,5506,8771,9407,14503,
#Partially deleted in new
chr1	203495969	203499709	chr1:203495969-203499709	0	+	203496005	203499709	789624	4	267,139,93,61,	0,1007,2777,3679,
#Partially deleted in new
chr1	203626560	203744081	chr1:203626560-203744081	3	+	203683205	203739854	789624	21	659,657,198,258,126,126,36,162,215,243,242,232,180,88,107,192,214,212,108,177,4536,	0,56181,71596,72899,73645,74237,75483,77091,80448,81301,82740,84316,85399,86604,87610,93988,94636,95917,97320,100834,112985,
#Partially deleted in new
chr1	203626786	203744079	chr1:203626786-203744079	1	+	203683205	203739571	789624	22	433,657,198,258,126,126,36,162,215,243,242,232,180,88,107,192,214,212,108,177,178,4534,	0,55955,71370,72673,73419,74011,75257,76865,80222,81075,82514,84090,85173,86378,87384,93762,94410,95691,97094,100608,106436,112759,
#Partially deleted in new
chr1	203656968	203657760	chr1:203656968-203657760	7	-	203656968	203656968	16724991	1	792,	0,
#Partially deleted in new
chr1	203682808	203740319	chr1:203682808-203740319	1	+	203683205	203739571	789624	21	590,198,258,126,126,36,162,215,243,242,232,180,88,107,192,214,212,108,177,178,774,	0,15348,16651,17397,17989,19235,20843,24200,25053,26492,28068,29151,30356,31362,37740,38388,39669,41072,44586,50414,56737,
#Partially deleted in new
chr1	203723896	203728310	chr1:203723896-203728310	0	+	203723896	203728234	789624	3	92,177,160,	0,3498,4254,
#Partially deleted in new
chr1	203723960	203727754	chr1:203723960-203727754	0	+	203723960	203723960	8553170	2	28,360,	0,3434,
#Partially deleted in new
chr1	203723962	203733632	chr1:203723962-203733632	0	+	203723962	203733408	789624	3	26,177,410,	0,3432,9260,
#Partially deleted in new
chr1	203727467	203744080	chr1:203727467-203744080	0	+	203727467	203739571	789624	4	104,178,99,4316,	0,5755,12078,12297,
#Deleted in new
chr1	203729580	203729705	chr1:203729580-203729705	3	+	203729580	203729580	789624	1	125,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	203765175	203776117	chr1:203765175-203776117	3	+	203765565	203774681	789624	5	479,110,111,80,2243,	0,5652,6191,6892,8699,
#Partially deleted in new
chr1	203765176	203774722	chr1:203765176-203774722	1	+	203765342	203774681	789624	5	207,110,111,80,848,	0,5651,6190,6891,8698,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	203769637	203776233	chr1:203769637-203776233	0	+	203769637	203769637	8553170	5	59,110,111,80,2359,	0,1190,1729,2430,4237,
#Partially deleted in new
chr1	203795653	203818665	chr1:203795653-203818665	0	+	203817070	203818665	789624	6	122,151,54,60,199,96,	0,797,5921,7303,21272,22916,
#Partially deleted in new
chr1	203795653	203847687	chr1:203795653-203847687	0	+	203817070	203847687	789624	13	141,60,199,120,124,204,117,81,111,63,99,69,504,	0,7303,21272,22916,32645,33797,34126,34469,36007,38137,42312,44652,51530,
#Deleted in new
chr1	203795653	203802173	chr1:203795653-203802173	0	+	203795653	203795653	8553170	3	141,204,599,	0,639,5921,
#Partially deleted in new
chr1	203795659	203854121	chr1:203795659-203854121	1	+	203817070	203852399	789624	18	135,1442,199,120,124,204,117,81,111,63,99,69,504,77,316,167,68,1981,	0,5915,21266,22910,32639,33791,34120,34463,36001,38131,42306,44646,51524,52671,54051,54855,55397,56481,
#Deleted in new
chr1	203795659	203802261	chr1:203795659-203802261	0	+	203795659	203795659	8553170	2	135,687,	0,5915,
#Partially deleted in new
chr1	203795659	203854999	chr1:203795659-203854999	0	+	203817070	203833968	789624	20	135,157,1442,199,120,124,204,117,81,111,63,166,99,69,504,77,316,167,68,2859,	0,791,5915,21266,22910,32639,33791,34120,34463,36001,38131,38277,42306,44646,51524,52671,54051,54855,55397,56481,
#Partially deleted in new
chr1	203795670	203852420	chr1:203795670-203852420	1	+	203817070	203852399	789624	20	124,309,54,365,199,120,124,204,117,81,111,63,99,69,504,77,316,167,68,280,	0,622,5904,6981,21255,22899,32628,33780,34109,34452,35990,38120,42295,44635,51513,52660,54040,54844,55386,56470,
#Deleted in new
chr1	203795685	203796788	chr1:203795685-203796788	0	+	203795685	203795685	8553170	2	109,338,	0,765,
#Partially deleted in new
chr1	203795694	203854999	chr1:203795694-203854999	3	+	203817070	203852399	789624	18	81,6566,199,120,124,204,117,81,111,63,99,69,504,77,316,167,68,2859,	0,756,21231,22875,32604,33756,34085,34428,35966,38096,42271,44611,51489,52636,54016,54820,55362,56446,
#Partially deleted in new
chr1	203795698	203852430	chr1:203795698-203852430	1	+	203817070	203852399	789624	20	77,204,54,60,199,120,124,204,117,81,111,63,99,69,504,77,316,167,68,290,	0,594,5876,7258,21227,22871,32600,33752,34081,34424,35962,38092,42267,44607,51485,52632,54012,54816,55358,56442,
#Partially deleted in new
chr1	203795705	203854124	chr1:203795705-203854124	1	+	203817070	203852399	789624	20	89,204,54,365,199,120,124,204,117,81,111,63,99,69,504,77,316,167,68,1984,	0,587,5869,6946,21220,22864,32593,33745,34074,34417,35955,38085,42260,44600,51478,52625,54005,54809,55351,56435,
#Partially deleted in new
chr1	203795713	203854999	chr1:203795713-203854999	1	+	203797522	203800462	789624	17	7303,199,120,124,204,117,81,111,63,99,69,504,77,316,167,68,2859,	0,21212,22856,32585,33737,34066,34409,35947,38077,42252,44592,51470,52617,53997,54801,55343,56427,
#Partially deleted in new
chr1	203798845	203854034	chr1:203798845-203854034	0	+	203817070	203850514	789624	17	4171,199,120,124,204,117,81,111,63,99,69,504,77,316,187,68,1894,	0,18080,19724,29453,30605,30934,31277,32815,34945,39120,41460,48338,49485,50865,51649,52211,53295,
#Partially deleted in new
chr1	203799334	203854118	chr1:203799334-203854118	3	+	203817070	203852399	8553170	17	3682,199,120,124,204,117,81,111,63,99,69,504,77,316,167,68,1978,	0,17591,19235,28964,30116,30445,30788,32326,34456,38631,40971,47849,48996,50376,51180,51722,52806,
#Partially deleted in new
chr1	203805620	203806263	chr1:203805620-203806263	7	-	203805620	203805620	16724991	1	643,	0,
#Deleted in new
chr1	203829270	203829896	chr1:203829270-203829896	0	+	203829270	203829270	8553170	2	384,117,	0,509,
#Deleted in new
chr1	203835584	203835912	chr1:203835584-203835912	7	-	203835584	203835584	16724991	1	328,	0,
#Partially deleted in new
chr1	203850173	203851122	chr1:203850173-203851122	0	+	203850173	203850173	8553170	2	508,66,	0,883,
#Partially deleted in new
chr1	203861602	203870084	chr1:203861602-203870084	0	+	203861602	203861602	8553170	5	141,41,63,79,208,	0,579,2060,3438,8274,
#Partially deleted in new
chr1	203861602	203870081	chr1:203861602-203870081	0	+	203861602	203861602	8553170	4	620,63,79,205,	0,2060,3438,8274,
#Partially deleted in new
chr1	203861608	203870077	chr1:203861608-203870077	0	+	203861608	203861608	789624	4	135,63,79,201,	0,2054,3432,8268,
#Partially deleted in new
chr1	203861614	203870550	chr1:203861614-203870550	3	+	203861659	203869932	0	5	99,27,63,79,674,	0,581,2048,3426,8262,
#Partially deleted in new
chr1	203861849	203865119	chr1:203861849-203865119	0	+	203861849	203861849	8553170	3	106,63,79,	0,1813,3191,
#Partially deleted in new
chr1	203863624	203870051	chr1:203863624-203870051	1	+	203863701	203869932	789624	3	101,79,175,	0,1416,6252,
#Partially deleted in new
chr1	203872573	203874187	chr1:203872573-203874187	7	-	203872573	203872573	16724991	2	343,1028,	0,586,
#Deleted in new
chr1	203903722	203904013	chr1:203903722-203904013	7	-	203903722	203903722	16724991	1	291,	0,
#Partially deleted in new
chr1	203954639	203955780	chr1:203954639-203955780	7	+	203954639	203954639	16724991	2	260,267,	0,874,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	204032446	204041265	chr1:204032446-204041265	3	-	204032446	204032446	8553170	5	804,163,620,130,174,	0,1258,4522,7818,8645,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	204032933	204041264	chr1:204032933-204041264	0	-	204032933	204032933	8553170	5	317,163,333,130,173,	0,771,4322,7331,8158,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	204032933	204041265	chr1:204032933-204041265	1	-	204032933	204032933	789624	6	317,163,116,128,130,174,	0,771,4035,4527,7331,8158,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	204073114	204119859	chr1:204073114-204119859	0	+	204073114	204073114	8553170	7	597,220,112,87,173,69,2267,	0,39800,41206,41404,43392,44007,44478,
#Partially deleted in new
chr1	204073152	204114570	chr1:204073152-204114570	0	+	204073152	204073152	8553170	3	559,112,52,	0,41168,41366,
#Partially deleted in new
chr1	204073155	204117158	chr1:204073155-204117158	0	+	204073155	204073155	8553170	3	556,176,37,	0,43348,43966,
#Partially deleted in new
chr1	204073603	204127743	chr1:204073603-204127743	3	+	204112915	204126134	789624	14	108,220,112,87,173,69,115,86,163,110,97,144,217,1886,	0,39311,40717,40915,42903,43518,43989,48296,48633,49250,49508,50057,51037,52254,
#Partially deleted in new
chr1	204074025	204113088	chr1:204074025-204113088	0	+	204112915	204113088	789624	2	364,174,	0,38889,
#Partially deleted in new
chr1	204078128	204116627	chr1:204078128-204116627	0	+	204112915	204116627	789624	5	57,220,112,87,121,	0,34786,36192,36390,38378,
#Partially deleted in new
chr1	204112915	204127741	chr1:204112915-204127741	1	+	204112915	204126134	789624	13	219,112,87,173,69,115,86,163,110,97,144,217,1884,	0,1405,1603,3591,4206,4677,8984,9321,9938,10196,10745,11725,12942,
#Partially deleted in new
chr1	204116064	204126152	chr1:204116064-204126152	0	+	204116064	204116064	8553170	11	285,173,69,115,86,163,110,97,144,217,295,	0,442,1057,1528,5835,6172,6789,7047,7596,8576,9793,
#Partially deleted in new
chr1	204116506	204122917	chr1:204116506-204122917	0	+	204116506	204121899	789624	6	173,69,115,115,163,64,	0,615,1086,5364,5730,6347,
#Deleted in new
chr1	204122385	204123729	chr1:204122385-204123729	0	+	204122385	204122385	8553170	3	578,97,69,	0,726,1275,
#Partially deleted in new
chr1	204131061	204151894	chr1:204131061-204151894	1	-	204134523	204151852	789624	8	1195,180,146,84,143,123,260,300,	0,3453,6042,8973,10253,15580,18641,20533,
#Partially deleted in new
chr1	204131061	204152003	chr1:204131061-204152003	3	-	204132183	204151852	789624	8	1195,74,146,84,143,123,260,409,	0,3453,6042,8973,10253,15580,18641,20533,
#Deleted in new
chr1	204131061	204131966	chr1:204131061-204131966	3	+	204131061	204131061	8553170	2	110,334,	0,571,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	204131955	204141262	chr1:204131955-204141262	1	-	204132183	204137163	789624	5	301,74,146,84,238,	0,2559,5148,8079,9069,
#Partially deleted in new
chr1	204131961	204141287	chr1:204131961-204141287	0	-	204132183	204141287	789624	5	295,74,146,84,72,	0,2553,5142,8073,9254,
#Partially deleted in new
chr1	204134514	204146990	chr1:204134514-204146990	0	-	204134514	204134514	8553170	5	74,146,84,143,349,	0,2589,5520,6800,12127,
#Partially deleted in new
chr1	204134537	204138919	chr1:204134537-204138919	0	-	204134537	204134537	8553170	3	157,146,301,	0,2566,4081,
#Partially deleted in new
chr1	204134547	204147575	chr1:204134547-204147575	0	-	204134547	204147575	789624	6	41,146,84,143,123,116,	0,2556,5487,6767,12094,12912,
#Partially deleted in new
chr1	204137111	204146960	chr1:204137111-204146960	0	-	204137111	204146960	789624	5	138,84,143,123,89,	0,2923,4203,9530,9760,
#Partially deleted in new
chr1	204137212	204149881	chr1:204137212-204149881	0	-	204137212	204149881	789624	4	37,84,143,179,	0,2822,4102,12490,
#Partially deleted in new
chr1	204140034	204142026	chr1:204140034-204142026	0	-	204140034	204140034	8553170	2	84,712,	0,1280,
#Deleted in new
chr1	204141407	204143009	chr1:204141407-204143009	3	+	204141407	204141407	789624	3	69,696,361,	0,157,1241,
#Deleted in new
chr1	204149872	204151428	chr1:204149872-204151428	0	-	204149872	204149908	789624	3	90,40,417,	0,627,1139,
#Partially deleted in new
chr1	204154818	204166322	chr1:204154818-204166322	3	-	204155015	204166293	0	10	359,99,142,120,9,197,119,124,151,127,	0,1001,1359,1858,2542,4580,5741,6473,7194,11377,
#Partially deleted in new
chr1	204154937	204190324	chr1:204154937-204190324	1	-	204155015	204162147	789624	12	240,99,142,120,9,197,119,124,151,111,83,93,	0,882,1240,1739,2423,4461,5622,6354,7075,17569,18900,35294,
#Deleted in new
chr1	204183005	204183537	chr1:204183005-204183537	7	+	204183005	204183005	16724991	1	532,	0,
#Deleted in new
chr1	204190340	204196486	chr1:204190340-204196486	3	-	204190483	204192876	789624	3	457,141,111,	0,2433,6035,
#Deleted in new
chr1	204190461	204192876	chr1:204190461-204192876	1	-	204190461	204192876	789624	3	21,311,103,	0,25,2312,
#Partially deleted in new
chr1	204198159	204214092	chr1:204198159-204214092	3	-	204198457	204213906	789624	5	337,64,179,92,211,	0,1035,3473,4736,15722,
#Partially deleted in new
chr1	204198941	204201701	chr1:204198941-204201701	0	-	204198941	204198941	8553170	2	317,69,	0,2691,
#Partially deleted in new
chr1	204218850	204359916	chr1:204218850-204359916	3	-	204223469	204273727	0	23	3929,124,146,134,168,174,107,130,140,112,96,150,81,69,517,483,143,101,73,105,115,81,223,	0,4611,9232,9877,10086,11562,22524,22834,26013,26764,28514,29970,30333,31695,38502,40407,42455,46091,48624,49357,54775,55878,140843,
#Partially deleted in new
chr1	204220755	204307395	chr1:204220755-204307395	1	-	204223469	204273727	789624	27	2024,124,146,134,168,174,107,130,150,140,112,96,150,81,69,81,54,87,517,483,143,101,73,105,115,81,59,	0,2706,7327,7972,8181,9657,20619,20929,22358,24108,24859,26609,28065,28428,29790,30775,34870,36046,36597,38502,40550,44186,46719,47452,52870,53973,86581,
#Partially deleted in new
chr1	204221220	204359916	chr1:204221220-204359916	1	-	204223469	204273727	789624	23	1559,124,146,134,168,174,107,130,140,112,96,150,81,69,517,483,203,101,73,105,115,81,223,	0,2241,6862,7507,7716,9192,20154,20464,23643,24394,26144,27600,27963,29325,36132,38037,40085,43721,46254,46987,52405,53508,138473,
#Deleted in new
chr1	204261337	204262100	chr1:204261337-204262100	0	-	204261337	204261337	8553170	2	171,141,	0,622,
#Partially deleted in new
chr1	204273625	204377665	chr1:204273625-204377665	0	-	204273625	204377665	789624	5	115,81,58,77,83,	0,1103,94173,97904,103957,
#Deleted in new
chr1	204277004	204277948	chr1:204277004-204277948	3	+	204277004	204277004	8553170	2	101,345,	0,599,
#Partially deleted in new
chr1	204346775	204347258	chr1:204346775-204347258	7	-	204346775	204346775	16724991	1	483,	0,
#Deleted in new
chr1	204368430	204369719	chr1:204368430-204369719	3	-	204368430	204368430	789624	1	1289,	0,
#Partially deleted in new
chr1	204377849	204435846	chr1:204377849-204435846	3	+	204377849	204377849	8553170	3	146,125,215,	0,57487,57782,
#Partially deleted in new
chr1	204394540	204394774	chr1:204394540-204394774	7	+	204394540	204394540	16724991	1	234,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	204403386	204411791	chr1:204403386-204411791	3	-	204406091	204411411	789624	2	2927,2300,	0,6105,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr1	204422627	204490424	chr1:204422627-204490424	3	-	204424851	204469802	789624	34	2413,129,107,82,118,125,202,110,157,170,137,130,93,108,181,95,94,189,143,112,168,123,196,34,147,64,80,112,121,155,101,1017,116,357,	0,2985,5020,5511,7293,9041,9572,10688,11165,11811,16307,17564,18843,19898,20789,21440,21703,23328,24808,26557,27222,32041,33228,34409,35100,37250,37696,37922,41384,41822,42591,46242,67188,67440,
#Boundary problem: need 35, got 0, diff 35, mapped 0.0
chr1	204422629	204490346	chr1:204422629-204490346	1	-	204424851	204469802	789624	35	2411,129,107,82,118,125,202,110,157,170,137,130,93,108,181,95,94,47,58,143,112,168,123,196,34,147,64,80,112,121,155,101,1017,116,279,	0,2983,5018,5509,7291,9039,9570,10686,11163,11809,16305,17562,18841,19896,20787,21438,21701,23326,23457,24806,26555,27220,32039,33226,34407,35098,37248,37694,37920,41382,41820,42589,46240,67186,67438,
#Deleted in new
chr1	204431339	204432271	chr1:204431339-204432271	0	-	204431339	204431339	8553170	2	454,72,	0,860,
#Partially deleted in new
chr1	204449175	204450130	chr1:204449175-204450130	0	-	204449175	204449175	8553170	2	121,281,	0,674,
#Deleted in new
chr1	204454576	204456291	chr1:204454576-204456291	0	-	204454576	204454576	8553170	2	215,436,	0,1279,
#Deleted in new
chr1	204464451	204467346	chr1:204464451-204467346	0	-	204464451	204467037	789624	3	153,101,576,	0,767,2319,
#Partially deleted in new
chr1	204469409	204494724	chr1:204469409-204494724	0	-	204469409	204469802	789624	2	477,369,	0,24946,
#Partially deleted in new
chr1	204469621	204494701	chr1:204469621-204494701	0	-	204469621	204469802	789624	3	265,116,346,	0,20194,24734,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	204516378	204558119	chr1:204516378-204558119	1	+	204525518	204549682	0	3	131,113,8854,	0,9105,32887,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	204516378	204558119	chr1:204516378-204558119	1	+	204525518	204538288	789624	10	131,113,75,134,56,100,161,150,81,9007,	0,9105,9981,14305,15812,21830,26405,28156,30418,32734,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	204516378	204558119	chr1:204516378-204558119	1	+	204525518	204549682	0	10	131,113,75,134,56,68,100,161,81,9007,	0,9105,9981,14305,15812,21051,21830,26405,30418,32734,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	204516378	204558119	chr1:204516378-204558119	1	+	204525518	204549682	789624	5	131,113,75,81,9007,	0,9105,9981,30418,32734,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	204516378	204558119	chr1:204516378-204558119	1	+	204525518	204549682	789624	8	131,113,39,100,161,150,81,9007,	0,9105,21080,21830,26405,28156,30418,32734,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	204516378	204558119	chr1:204516378-204558119	1	+	204525518	204546804	789624	7	131,113,75,134,56,81,9007,	0,9105,9981,14305,15812,30418,32734,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	204516382	204558120	chr1:204516382-204558120	3	+	204525518	204549682	0	11	127,113,75,134,56,68,100,161,150,81,9008,	0,9101,9977,14301,15808,21047,21826,26401,28152,30414,32730,
#Partially deleted in new
chr1	204516382	204532650	chr1:204516382-204532650	0	+	204516382	204516382	8553170	5	127,113,75,134,460,	0,9101,9977,14301,15808,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	204516405	204554201	chr1:204516405-204554201	0	+	204516405	204516405	8553170	11	104,113,75,134,56,39,100,161,150,81,5089,	0,9078,9954,14278,15785,21053,21803,26378,28129,30391,32707,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	204516405	204554200	chr1:204516405-204554200	1	+	204525518	204538288	789624	12	104,113,75,134,56,39,100,161,150,81,2916,1663,	0,9078,9954,14278,15785,21053,21803,26378,28129,30391,32707,36132,
#Partially deleted in new
chr1	204516450	204546832	chr1:204516450-204546832	0	+	204516450	204516450	8553170	9	59,113,75,134,56,100,161,150,36,	0,9033,9909,14233,15740,21758,26333,28084,30346,
#Partially deleted in new
chr1	204516471	204544599	chr1:204516471-204544599	0	+	204516471	204516471	8553170	6	38,113,75,100,161,65,	0,9012,9888,21737,26312,28063,
#Partially deleted in new
chr1	204525489	204537041	chr1:204525489-204537041	1	+	204525518	204536919	789624	6	107,75,134,56,51,124,	0,870,5194,6701,7279,11428,
#Partially deleted in new
chr1	204525518	204546834	chr1:204525518-204546834	1	+	204525518	204538288	789624	6	78,75,134,56,100,38,	0,841,5165,6672,12690,21278,
#Deleted in new
chr1	204528844	204529692	chr1:204528844-204529692	7	-	204528844	204528844	16724991	1	848,	0,
#Partially deleted in new
chr1	204537856	204549194	chr1:204537856-204549194	0	+	204537913	204549194	789624	6	135,88,161,150,81,82,	0,364,4927,6678,8940,11256,
#Partially deleted in new
chr1	204537874	204542931	chr1:204537874-204542931	0	+	204537874	204537874	8553170	2	434,148,	0,4909,
#Partially deleted in new
chr1	204542788	204549388	chr1:204542788-204549388	0	+	204542788	204549388	789624	3	156,81,276,	0,4008,6324,
#Partially deleted in new
chr1	204603034	204616565	chr1:204603034-204616565	3	+	204603034	204603034	8553170	3	117,83,483,	0,12152,13048,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	204617169	204622205	chr1:204617169-204622205	1	-	204617850	204619992	789624	1	5036,	0,
#Partially deleted in new
chr1	204617169	204685353	chr1:204617169-204685353	1	-	204617850	204619992	789624	3	3049,128,34,	0,65700,68150,
#Partially deleted in new
chr1	204617169	204685733	chr1:204617169-204685733	3	-	204617850	204619992	789624	2	3049,414,	0,68150,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	204626774	204629712	chr1:204626774-204629712	3	+	204626774	204626774	8553170	2	602,1617,	0,1321,
#Deleted in new
chr1	204663871	204664613	chr1:204663871-204664613	3	+	204663871	204663871	8553170	2	139,306,	0,436,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	204707319	204707430	chr1:204707319-204707430	7	-	204707319	204707319	16724991	1	111,	0,
#Deleted in new
chr1	204727990	204728106	chr1:204727990-204728106	3	+	204727990	204727990	8553170	1	116,	0,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr1	204828650	205010924	chr1:204828650-205010924	0	+	204828650	204828650	8553170	26	132,109,181,106,197,123,171,51,213,112,185,132,144,112,167,148,125,45,102,198,71,223,205,123,174,1368,	0,91981,115575,123360,125537,126178,129005,133457,139194,139598,140147,141965,144625,145528,146006,146620,148020,149030,150317,150711,151719,153147,157259,158767,159982,180906,
#Partially deleted in new
chr1	204828653	205022821	chr1:204828653-205022821	1	+	204944315	205016539	789624	30	129,109,181,18,106,197,123,171,112,185,132,144,112,167,148,125,45,102,198,71,223,123,174,15,237,117,153,132,70,6514,	0,91978,115572,121903,123357,125534,126175,129002,139595,140144,141962,144622,145525,146003,146617,148017,149027,150314,150708,151716,153144,158764,159979,162638,168516,172516,173942,180903,184143,187654,
#Partially deleted in new
chr1	204828653	205022821	chr1:204828653-205022821	3	+	204944315	205016539	789624	27	129,109,181,106,197,123,171,51,112,185,132,144,112,167,148,125,102,198,71,223,116,205,123,174,132,70,6514,	0,91978,115572,123357,125534,126175,129002,133454,139595,140144,141962,144622,145525,146003,146617,148017,150314,150708,151716,153144,155373,157256,158764,159979,180903,184143,187654,
#Partially deleted in new
chr1	204828653	205022821	chr1:204828653-205022821	1	+	204944315	205016539	789624	28	129,109,181,106,197,123,171,51,112,185,132,144,112,167,148,125,102,198,71,223,116,205,123,174,15,132,70,6514,	0,91978,115572,123357,125534,126175,129002,133454,139595,140144,141962,144622,145525,146003,146617,148017,150314,150708,151716,153144,155373,157256,158764,159979,162638,180903,184143,187654,
#Partially deleted in new
chr1	204828694	204977139	chr1:204828694-204977139	1	+	204944315	204976824	789624	16	88,109,181,18,106,197,123,171,112,185,132,144,112,167,148,469,	0,91937,115531,121862,123316,125493,126134,128961,139554,140103,141921,144581,145484,145962,146576,147976,
#Partially deleted in new
chr1	204870603	204945032	chr1:204870603-204945032	0	+	204870603	204870603	8553170	4	97,109,181,296,	0,50028,73622,74133,
#Partially deleted in new
chr1	204870830	205018371	chr1:204870830-205018371	1	+	204944315	205016539	789624	27	223,109,181,106,197,123,171,112,185,132,144,112,167,148,125,102,198,71,223,116,205,123,174,15,132,70,2064,	0,49801,73395,81180,83357,83998,86825,97418,97967,99785,102445,103348,103826,104440,105840,108137,108531,109539,110967,113196,115079,116587,117802,120461,138726,141966,145477,
#Partially deleted in new
chr1	204870861	204974683	chr1:204870861-204974683	0	+	204870861	204870861	8553170	13	209,109,181,106,197,123,171,51,112,185,132,144,505,	0,49770,73364,81149,83326,83967,86794,91246,97387,97936,99754,102414,103317,
#Partially deleted in new
chr1	204920631	205022822	chr1:204920631-205022822	1	+	204944315	205016539	789624	29	109,181,18,106,197,123,171,112,185,132,144,112,167,148,125,45,102,198,71,223,123,174,15,237,117,153,132,70,6515,	0,23594,29925,31379,33556,34197,37024,47617,48166,49984,52644,53547,54025,54639,56039,57049,58336,58730,59738,61166,66786,68001,70660,76538,80538,81964,88925,92165,95676,
#Partially deleted in new
chr1	204929408	204954361	chr1:204929408-204954361	0	+	204944315	204954361	789624	5	94,181,18,106,174,	0,14817,21148,22602,24779,
#Partially deleted in new
chr1	204944225	205018371	chr1:204944225-205018371	1	+	204944315	205016539	789624	26	181,106,197,123,171,51,112,185,132,144,112,167,148,125,102,198,71,223,116,205,123,174,15,132,70,2064,	0,7785,9962,10603,13430,17882,24023,24572,26390,29050,29953,30431,31045,32445,34742,35136,36144,37572,39801,41684,43192,44407,47066,65331,68571,72082,
#Partially deleted in new
chr1	204944250	205016938	chr1:204944250-205016938	0	+	204944315	204974586	789624	27	156,18,106,197,123,171,51,112,185,132,144,112,256,148,125,45,102,198,71,223,116,205,123,174,132,70,631,	0,6306,7760,9937,10578,13405,17857,23998,24547,26365,29025,29928,30317,31020,32420,33430,34717,35111,36119,37547,39776,41659,43167,44382,65306,68546,72057,
#Partially deleted in new
chr1	204944250	205016938	chr1:204944250-205016938	1	+	204944315	205016539	789624	25	156,106,197,123,171,51,112,185,132,144,112,167,148,125,102,198,71,223,116,205,123,174,132,70,631,	0,7760,9937,10578,13405,17857,23998,24547,26365,29025,29928,30406,31020,32420,34717,35111,36119,37547,39776,41659,43167,44382,65306,68546,72057,
#Partially deleted in new
chr1	204944387	205018371	chr1:204944387-205018371	0	+	204944387	205016539	789624	27	19,106,197,123,171,51,112,185,132,144,112,167,148,125,45,102,198,71,223,116,205,123,174,15,132,70,2064,	0,7623,9800,10441,13268,17720,23861,24410,26228,28888,29791,30269,30883,32283,33293,34580,34974,35982,37410,39639,41522,43030,44245,46904,65169,68409,71920,
#Deleted in new
chr1	204946607	204947169	chr1:204946607-204947169	7	+	204946607	204946607	16724991	1	562,	0,
#Partially deleted in new
chr1	204950556	205018371	chr1:204950556-205018371	0	+	204950556	205016539	789624	24	18,106,197,123,171,112,185,132,144,112,167,148,125,45,102,198,71,223,123,174,15,132,70,2064,	0,1454,3631,4272,7099,17692,18241,20059,22719,23622,24100,24714,26114,27124,28411,28805,29813,31241,36861,38076,40735,59000,62240,65751,
#Partially deleted in new
chr1	204957657	204968825	chr1:204957657-204968825	0	+	204957657	204957657	8553170	2	169,577,	0,10591,
#Partially deleted in new
chr1	204957694	204990563	chr1:204957694-204990563	0	+	204957694	204957694	8553170	17	132,112,185,132,144,112,167,148,125,102,198,71,223,116,205,123,1931,	0,10554,11103,12921,15581,16484,16962,17576,18976,21273,21667,22675,24103,26332,28215,29723,30938,
#Deleted in new
chr1	204979387	204984329	chr1:204979387-204984329	0	+	204979387	204979387	8553170	4	172,71,223,303,	0,982,2410,4639,
#Partially deleted in new
chr1	204981855	205018371	chr1:204981855-205018371	0	+	204981855	205016539	789624	6	165,123,174,132,70,2064,	0,5562,6777,27701,30941,34452,
#Deleted in new
chr1	204981883	204988806	chr1:204981883-204988806	0	+	204981883	204981883	8553170	3	137,116,174,	0,5541,6749,
#Partially deleted in new
chr1	204986674	205022822	chr1:204986674-205022822	0	+	204986674	204986674	8553170	6	866,174,153,132,70,6515,	0,1958,15921,22882,26122,29633,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	204987469	205000846	chr1:204987469-205000846	0	+	204987469	204987469	8553170	4	71,174,15,3677,	0,1163,3822,9700,
#Partially deleted in new
chr1	204988663	205016386	chr1:204988663-205016386	0	+	204988663	205016386	789624	7	143,15,117,153,132,70,79,	0,2628,12506,13932,20893,24133,27644,
#Partially deleted in new
chr1	204997183	205018739	chr1:204997183-205018739	0	+	204997183	205016539	789624	4	223,132,70,2432,	0,12373,15613,19124,
#Partially deleted in new
chr1	205008444	205021031	chr1:205008444-205021031	0	+	205008444	205008444	8553170	3	1244,70,4724,	0,4352,7863,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr1	205042936	205073107	chr1:205042936-205073107	0	+	205053185	205057263	789624	21	106,156,858,483,210,100,176,137,130,151,128,176,121,159,150,71,235,113,187,113,40,	0,10163,14271,15244,16147,16646,18308,18928,19503,21385,21686,22150,22852,23504,24164,26554,26890,27489,29010,29546,30131,
#Partially deleted in new
chr1	205042967	205074928	chr1:205042967-205074928	1	+	205053185	205073765	0	23	75,156,145,176,96,210,100,176,137,130,151,128,176,121,159,150,71,235,113,187,113,169,1273,	0,10132,14953,15213,15600,16116,16615,18277,18897,19472,21354,21655,22119,22821,23473,24133,26523,26859,27458,28979,29515,30100,30688,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr1	205043123	205078284	chr1:205043123-205078284	3	+	205053185	205073765	0	23	271,156,145,176,96,210,100,176,137,130,151,128,176,121,159,150,71,235,113,187,113,169,4629,	0,9976,14797,15057,15444,15960,16459,18121,18741,19316,21198,21499,21963,22665,23317,23977,26367,26703,27302,28823,29359,29944,30532,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	205043192	205070808	chr1:205043192-205070808	0	+	205043192	205043192	8553170	17	202,156,145,1113,100,176,137,130,151,128,176,121,159,150,71,235,383,	0,9907,14728,14988,16390,18052,18672,19247,21129,21430,21894,22596,23248,23908,26298,26634,27233,
#Partially deleted in new
chr1	205043195	205074944	chr1:205043195-205074944	1	+	205053185	205074341	789624	23	199,156,145,176,96,210,100,176,137,130,151,128,176,121,159,150,71,235,113,187,113,169,848,	0,9904,14725,14985,15372,15888,16387,18049,18669,19244,21126,21427,21891,22593,23245,23905,26295,26631,27230,28751,29287,29872,30901,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	205043201	205059143	chr1:205043201-205059143	0	+	205053185	205057263	789624	6	193,156,858,176,96,60,	0,9898,14006,14979,15366,15882,
#Partially deleted in new
chr1	205043209	205074944	chr1:205043209-205074944	0	+	205053185	205073765	0	24	185,156,145,176,96,210,100,176,137,130,151,128,176,121,159,150,71,235,113,187,113,169,186,848,	0,9890,14711,14971,15358,15874,16373,18035,18655,19230,21112,21413,21877,22579,23231,23891,26281,26617,27216,28737,29273,29858,30446,30887,
#Partially deleted in new
chr1	205043211	205074929	chr1:205043211-205074929	0	+	205053185	205069984	789624	23	183,156,145,176,96,210,100,176,137,130,151,128,176,121,159,150,71,176,113,187,113,169,1274,	0,9888,14709,14969,15356,15872,16371,18033,18653,19228,21110,21411,21875,22577,23229,23889,26279,26674,27214,28735,29271,29856,30444,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr1	205043211	205075638	chr1:205043211-205075638	0	+	205053185	205073765	0	24	183,156,145,176,96,210,100,176,137,130,151,128,176,121,159,150,71,235,113,187,113,169,257,1542,	0,9888,14709,14969,15356,15872,16371,18033,18653,19228,21110,21411,21875,22577,23229,23889,26279,26615,27214,28735,29271,29856,30444,30885,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	205058346	205060520	chr1:205058346-205060520	0	+	205058346	205058346	8553170	1	2174,	0,
#Partially deleted in new
chr1	205058382	205062335	chr1:205058382-205062335	0	+	205058382	205058382	8553170	5	281,210,100,176,471,	0,701,1200,2862,3482,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	205058430	205060687	chr1:205058430-205060687	0	+	205058430	205058430	8553170	3	233,210,1105,	0,653,1152,
#Partially deleted in new
chr1	205058485	205074893	chr1:205058485-205074893	0	+	205058485	205058485	8553170	19	178,210,100,176,137,130,151,128,176,121,159,150,71,235,113,187,113,169,797,	0,598,1097,2759,3379,3954,5836,6137,6601,7303,7955,8615,11005,11341,11940,13461,13997,14582,15611,
#Partially deleted in new
chr1	205058604	205074956	chr1:205058604-205074956	0	+	205058604	205058604	8553170	18	689,100,176,137,130,151,128,176,121,159,150,71,235,113,187,113,169,1301,	0,978,2640,3260,3835,5717,6018,6482,7184,7836,8496,10886,11222,11821,13342,13878,14463,15051,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	205059126	205077956	chr1:205059126-205077956	0	+	205059126	205073878	789624	18	167,100,176,137,130,151,128,176,121,159,150,71,235,113,187,113,497,4301,	0,456,2118,2738,3313,5195,5496,5960,6662,7314,7974,10364,10700,11299,12820,13356,13941,14529,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	205059390	205063583	chr1:205059390-205063583	0	+	205059390	205059390	8553170	4	292,176,137,1144,	0,1854,2474,3049,
#Partially deleted in new
chr1	205060775	205064641	chr1:205060775-205064641	0	+	205060775	205060775	8553170	5	645,137,130,151,19,	0,1089,1664,3546,3847,
#Partially deleted in new
chr1	205061256	205074946	chr1:205061256-205074946	0	+	205061256	205069984	789624	16	164,137,130,151,128,176,121,159,150,71,110,113,187,113,169,1291,	0,608,1183,3065,3366,3830,4532,5184,5844,8234,8695,9169,10690,11226,11811,12399,
#Partially deleted in new
chr1	205061264	205066346	chr1:205061264-205066346	0	+	205061264	205061264	8553170	7	156,137,130,151,128,176,558,	0,600,1175,3057,3358,3822,4524,
#Partially deleted in new
chr1	205061392	205070451	chr1:205061392-205070451	0	+	205061392	205061392	8553170	11	28,137,130,151,128,176,121,159,150,71,625,	0,472,1047,2929,3230,3694,4396,5048,5708,8098,8434,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	205061403	205067870	chr1:205061403-205067870	0	+	205061403	205061403	8553170	9	17,137,130,151,128,176,121,159,770,	0,461,1036,2918,3219,3683,4385,5037,5697,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	205061535	205063610	chr1:205061535-205063610	0	+	205061535	205061535	8553170	1	2075,	0,
#Partially deleted in new
chr1	205061833	205064728	chr1:205061833-205064728	0	+	205061833	205061833	8553170	4	168,130,151,106,	0,606,2488,2789,
#Partially deleted in new
chr1	205062447	205074934	chr1:205062447-205074934	0	+	205062447	205062447	8553170	12	122,151,128,176,121,159,150,71,235,113,187,2452,	0,1874,2175,2639,3341,3993,4653,7043,7379,7978,9499,10035,
#Partially deleted in new
chr1	205064712	205074929	chr1:205064712-205074929	0	+	205064712	205066080	789624	13	38,176,121,151,159,150,71,235,113,187,113,169,1274,	0,374,1076,1357,1728,2388,4778,5114,5713,7234,7770,8355,8943,
#Partially deleted in new
chr1	205065155	205068878	chr1:205065155-205068878	0	+	205065155	205065155	8553170	5	107,121,159,150,339,	0,633,1285,1945,3384,
#Partially deleted in new
chr1	205065856	205074826	chr1:205065856-205074826	0	+	205065856	205073568	789624	9	53,159,150,71,235,113,187,113,1759,	0,584,1244,3634,3970,4569,6090,6626,7211,
#Partially deleted in new
chr1	205066351	205074944	chr1:205066351-205074944	0	+	205066351	205066351	8553170	9	248,150,71,235,113,187,113,497,1289,	0,749,3139,3475,4074,5595,6131,6716,7304,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	205066465	205075176	chr1:205066465-205075176	0	+	205066465	205066465	8553170	9	134,150,71,235,113,187,754,257,1080,	0,635,3025,3361,3960,5481,6017,7190,7631,
#Partially deleted in new
chr1	205066553	205070666	chr1:205066553-205070666	0	+	205066553	205066553	8553170	4	46,150,71,781,	0,547,2937,3332,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	205068058	205070856	chr1:205068058-205070856	0	+	205068058	205068058	8553170	1	2798,	0,
#Partially deleted in new
chr1	205070003	205074804	chr1:205070003-205074804	0	+	205070003	205070003	8553170	4	58,113,1290,1149,	0,422,1943,3652,
#Deleted in new
chr1	205072990	205074042	chr1:205072990-205074042	0	+	205072990	205072990	8553170	2	246,387,	0,665,
#Deleted in new
chr1	205083128	205084460	chr1:205083128-205084460	3	-	205083552	205084320	789624	1	1332,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	205086141	205122015	chr1:205086141-205122015	3	-	205088786	205121873	0	14	2674,192,230,70,118,72,154,120,110,163,141,173,26,161,	0,8731,10540,11184,12847,13599,13769,14010,15458,17715,18886,28647,29716,35713,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	205086141	205122015	chr1:205086141-205122015	1	-	205088786	205121873	0	14	2674,78,230,70,118,72,154,120,110,163,141,173,26,161,	0,8845,10540,11184,12847,13599,13769,14010,15458,17715,18886,28647,29716,35713,
#Deleted in new
chr1	205091162	205091946	chr1:205091162-205091946	7	+	205091162	205091162	16724991	1	784,	0,
#Partially deleted in new
chr1	205105086	205121966	chr1:205105086-205121966	0	-	205105086	205105086	8553170	3	82,173,112,	0,9702,16768,
#Deleted in new
chr1	205134645	205134950	chr1:205134645-205134950	7	+	205134645	205134645	16724991	1	305,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	205142504	205211566	chr1:205142504-205211566	1	-	205147557	205211535	789624	12	5241,115,114,133,157,130,177,84,233,670,389,296,	0,8175,14768,17042,17609,18753,19531,20418,21218,26658,44913,68766,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	205142504	205211566	chr1:205142504-205211566	3	-	205147557	205211535	789624	13	5241,135,115,114,133,157,130,177,84,233,670,389,296,	0,5700,8175,14768,17042,17609,18753,19531,20418,21218,26658,44913,68766,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	205160005	205173393	chr1:205160005-205173393	1	-	205160061	205162946	789624	6	265,130,177,84,29,357,	0,1252,2030,2917,3717,13031,
#Deleted in new
chr1	205202190	205202742	chr1:205202190-205202742	7	+	205202190	205202190	16724991	1	552,	0,
#Partially deleted in new
chr1	205228175	205273343	chr1:205228175-205273343	1	+	205228564	205272124	789624	5	596,540,935,136,1531,	0,13329,40774,42944,43637,
#Partially deleted in new
chr1	205228930	205273342	chr1:205228930-205273342	1	+	205241531	205272124	789624	5	198,540,935,136,1530,	0,12574,40019,42189,42882,
#Partially deleted in new
chr1	205229731	205273343	chr1:205229731-205273343	0	+	205229731	205229731	8553170	5	438,540,935,136,1531,	0,11773,39218,41388,42081,
#Partially deleted in new
chr1	205233820	205236867	chr1:205233820-205236867	3	-	205233820	205233820	8553170	2	323,363,	0,2684,
#Partially deleted in new
chr1	205246495	205269558	chr1:205246495-205269558	0	+	205246495	205246495	8553170	3	196,87,609,	0,9834,22454,
#Partially deleted in new
chr1	205246619	205273343	chr1:205246619-205273343	0	+	205246619	205246619	8553170	4	72,935,136,1531,	0,22330,24500,25193,
#Partially deleted in new
chr1	205246619	205272124	chr1:205246619-205272124	1	+	205246619	205272124	789624	4	72,935,136,312,	0,22330,24500,25193,
#Partially deleted in new
chr1	205256200	205273343	chr1:205256200-205273343	3	+	205256389	205272124	789624	4	216,935,136,1531,	0,12749,14919,15612,
#Partially deleted in new
chr1	205256200	205272252	chr1:205256200-205272252	0	+	205256200	205256200	8553170	3	216,136,440,	0,14919,15612,
#Partially deleted in new
chr1	205257188	205273343	chr1:205257188-205273343	1	+	205257204	205272124	789624	4	178,935,136,1531,	0,11761,13931,14624,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	205272432	205285632	chr1:205272432-205285632	0	+	205272432	205272432	8553170	5	113,318,136,110,64,	0,5595,7916,11405,13136,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	205302058	205321791	chr1:205302058-205321791	3	-	205303449	205321760	789624	7	2455,133,120,66,152,121,394,	0,3140,4129,6106,6522,9646,19339,
#Partially deleted in new
chr1	205336064	205357090	chr1:205336064-205357090	3	-	205337398	205343604	789624	8	1528,102,216,165,565,215,37,103,	0,2430,3129,3579,7164,12311,20468,20923,
#Partially deleted in new
chr1	205336091	205356911	chr1:205336091-205356911	1	-	205337398	205343604	789624	6	1501,102,216,165,565,379,	0,2403,3102,3552,7137,20441,
#Partially deleted in new
chr1	205336091	205357038	chr1:205336091-205357038	1	-	205337398	205343604	789624	9	1501,102,216,165,565,325,215,37,51,	0,2403,3102,3552,7137,8042,12284,20441,20896,
#Partially deleted in new
chr1	205337314	205356578	chr1:205337314-205356578	1	-	205337398	205339782	789624	6	278,102,216,165,215,46,	0,1180,1879,2329,11061,19218,
#Deleted in new
chr1	205337522	205339861	chr1:205337522-205339861	0	-	205337522	205339782	789624	4	70,102,216,218,	0,972,1671,2121,
#Partially deleted in new
chr1	205339800	205344182	chr1:205339800-205344182	0	-	205339800	205343469	789624	4	8,370,96,49,	0,3428,3897,4333,
#Partially deleted in new
chr1	205343367	205357090	chr1:205343367-205357090	0	-	205343367	205343604	789624	3	426,37,103,	0,13165,13620,
#Partially deleted in new
chr1	205343406	205356878	chr1:205343406-205356878	0	-	205343406	205343604	789624	3	387,215,346,	0,4969,13126,
#Partially deleted in new
chr1	205343525	205357038	chr1:205343525-205357038	0	-	205343525	205343604	789624	4	268,215,37,51,	0,4850,13007,13462,
#Partially deleted in new
chr1	205343688	205357038	chr1:205343688-205357038	0	-	205343688	205343688	8553170	4	105,325,37,51,	0,445,12844,13299,
#Partially deleted in new
chr1	205344195	205356836	chr1:205344195-205356836	0	-	205344195	205344195	8553170	2	263,304,	0,12337,
#Partially deleted in new
chr1	205344410	205356836	chr1:205344410-205356836	0	-	205344410	205344410	8553170	3	48,215,304,	0,3965,12122,
#Partially deleted in new
chr1	205351246	205351471	chr1:205351246-205351471	7	+	205351246	205351246	16724991	1	225,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	205373251	205387440	chr1:205373251-205387440	3	+	205373251	205373251	789624	4	183,272,118,2208,	0,5802,8775,11981,
#Partially deleted in new
chr1	205381377	205420574	chr1:205381377-205420574	1	-	205381657	205420536	789624	4	479,77,65,120,	0,2910,34854,39077,
#Partially deleted in new
chr1	205381377	205422054	chr1:205381377-205422054	1	-	205381657	205420536	789624	6	479,77,65,123,120,65,	0,2910,34854,37852,39077,40612,
#Partially deleted in new
chr1	205381377	205449931	chr1:205381377-205449931	3	-	205381734	205420536	789624	4	479,123,120,64,	0,37852,39077,68490,
#Partially deleted in new
chr1	205381377	205422030	chr1:205381377-205422030	0	-	205381377	205381377	789624	4	479,77,120,41,	0,2910,39077,40612,
#Partially deleted in new
chr1	205381377	205455954	chr1:205381377-205455954	1	-	205381734	205420536	789624	3	479,120,38,	0,39077,74539,
#Partially deleted in new
chr1	205381380	205420582	chr1:205381380-205420582	1	-	205381734	205420536	789624	2	476,128,	0,39074,
#Partially deleted in new
chr1	205381380	205420582	chr1:205381380-205420582	1	-	205381657	205420536	789624	5	476,77,65,123,128,	0,2907,34851,37849,39074,
#Partially deleted in new
chr1	205381380	205420582	chr1:205381380-205420582	1	-	205381734	205420536	789624	3	476,123,128,	0,37849,39074,
#Deleted in new
chr1	205434885	205437879	chr1:205434885-205437879	3	-	205434885	205434885	8553170	1	2994,	0,
#Deleted in new
chr1	205436985	205456086	chr1:205436985-205456086	0	-	205436985	205436985	8553170	2	346,170,	0,18931,
#Deleted in new
chr1	205440606	205456036	chr1:205440606-205456036	0	-	205440606	205440606	8553170	2	456,120,	0,15310,
#Deleted in new
chr1	205448301	205448398	chr1:205448301-205448398	3	-	205448301	205448301	5263520	1	97,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	205455928	205469024	chr1:205455928-205469024	3	+	205455928	205455928	789624	3	295,186,2404,	0,963,10692,
#Deleted in new
chr1	205455947	205457091	chr1:205455947-205457091	0	-	205455947	205455947	8553170	2	88,226,	0,918,
#Partially deleted in new
chr1	205504594	205531378	chr1:205504594-205531378	1	+	205523167	205531378	789624	16	202,151,143,126,57,115,95,63,124,121,98,106,43,91,78,35,	0,18552,18888,19637,20544,21470,21772,22180,23199,23453,24404,24729,24926,25664,26033,26749,
#Partially deleted in new
chr1	205504595	205526835	chr1:205504595-205526835	0	+	205523173	205523392	789624	7	201,479,126,57,115,95,61,	0,18551,19636,20543,21469,21771,22179,
#Partially deleted in new
chr1	205504596	205531762	chr1:205504596-205531762	0	+	205523173	205523392	789624	15	282,617,126,57,115,95,63,124,121,98,106,43,91,78,419,	0,18412,19635,20542,21468,21770,22178,23197,23451,24402,24727,24924,25662,26031,26747,
#Partially deleted in new
chr1	205504597	205531786	chr1:205504597-205531786	3	+	205523167	205531378	789624	16	199,151,233,126,57,115,95,63,124,121,98,106,43,91,78,443,	0,18549,18885,19634,20541,21467,21769,22177,23196,23450,24401,24726,24923,25661,26030,26746,
#Partially deleted in new
chr1	205504598	205532793	chr1:205504598-205532793	1	+	205523167	205531378	789624	16	280,151,143,126,57,115,95,63,124,121,98,106,43,91,78,1450,	0,18548,18884,19633,20540,21466,21768,22176,23195,23449,24400,24725,24922,25660,26029,26745,
#Partially deleted in new
chr1	205504658	205523686	chr1:205504658-205523686	0	+	205504658	205504658	8553170	2	138,204,	0,18824,
#Partially deleted in new
chr1	205504687	205524355	chr1:205504687-205524355	0	+	205523173	205523392	789624	3	191,479,124,	0,18459,19544,
#Partially deleted in new
chr1	205504693	205527873	chr1:205504693-205527873	0	+	205523619	205527873	789624	8	103,143,126,57,115,95,63,80,	0,18789,19538,20445,21371,21673,22081,23100,
#Partially deleted in new
chr1	205504704	205525190	chr1:205504704-205525190	0	+	205523167	205525190	789624	5	92,151,170,126,52,	0,18442,18841,19527,20434,
#Partially deleted in new
chr1	205504748	205524329	chr1:205504748-205524329	0	+	205523619	205524329	789624	4	48,81,208,98,	0,18468,18759,19483,
#Partially deleted in new
chr1	205504801	205527825	chr1:205504801-205527825	0	+	205523167	205527825	789624	9	77,151,233,126,57,115,95,63,32,	0,18345,18681,19430,20337,21263,21565,21973,22992,
#Partially deleted in new
chr1	205516816	205523279	chr1:205516816-205523279	0	+	205516816	205516816	8553170	2	218,133,	0,6330,
#Partially deleted in new
chr1	205522428	205532785	chr1:205522428-205532785	0	+	205523173	205523392	789624	14	1197,126,57,115,95,63,124,121,98,106,43,91,78,1442,	0,1803,2710,3636,3938,4346,5365,5619,6570,6895,7092,7830,8199,8915,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	205523553	205527263	chr1:205523553-205527263	0	+	205523553	205523553	8553170	6	72,126,57,115,95,489,	0,678,1585,2511,2813,3221,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	205523559	205530016	chr1:205523559-205530016	0	+	205523559	205523559	8553170	11	66,126,57,115,95,105,124,121,98,106,496,	0,672,1579,2505,2807,3173,4234,4488,5439,5764,5961,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	205527409	205532793	chr1:205527409-205532793	0	+	205527409	205527409	8553170	7	508,121,98,106,829,78,1450,	0,638,1589,1914,2111,3218,3934,
#Deleted in new
chr1	205527827	205528994	chr1:205527827-205528994	0	+	205527827	205527827	8553170	3	90,121,332,	0,220,835,
#Deleted in new
chr1	205528054	205529579	chr1:205528054-205529579	0	+	205528054	205528054	8553170	3	114,98,256,	0,944,1269,
#Deleted in new
chr1	205528130	205529516	chr1:205528130-205529516	0	+	205528130	205528130	8553170	2	38,518,	0,868,
#Partially deleted in new
chr1	205529193	205531404	chr1:205529193-205531404	0	+	205529193	205529193	8553170	5	236,43,164,78,61,	0,327,992,1434,2150,
#Partially deleted in new
chr1	205529200	205531942	chr1:205529200-205531942	0	+	205529200	205529200	8553170	5	229,43,91,78,599,	0,320,1058,1427,2143,
#Partially deleted in new
chr1	205529218	205531552	chr1:205529218-205531552	0	+	205529218	205529218	8553170	4	211,43,78,209,	0,302,1409,2125,
#Partially deleted in new
chr1	205530312	205531666	chr1:205530312-205531666	0	+	205530312	205530312	8553170	2	393,323,	0,1031,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	205566715	205566799	chr1:205566715-205566799	3	+	205566715	205566715	8553170	1	84,	0,
#Partially deleted in new
chr1	205568884	205599251	chr1:205568884-205599251	0	+	205569069	205580697	789624	8	415,261,169,116,174,148,71,121,	0,11776,15070,15991,17149,23255,28895,30246,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	205568976	205602918	chr1:205568976-205602918	3	+	205569069	205600461	789624	10	323,199,261,169,116,174,148,71,121,2513,	0,10774,11684,14978,15899,17057,23163,28803,30154,31429,
#Partially deleted in new
chr1	205568983	205600784	chr1:205568983-205600784	0	+	205569069	205599156	789624	9	316,199,261,169,116,174,148,121,379,	0,10767,11677,14971,15892,17050,23156,30147,31422,
#Partially deleted in new
chr1	205569020	205600462	chr1:205569020-205600462	1	+	205569069	205600461	789624	7	279,199,261,148,71,121,57,	0,10730,11640,23119,28759,30110,31385,
#Deleted in new
chr1	205579530	205583960	chr1:205579530-205583960	0	+	205579853	205583960	789624	4	76,199,261,6,	0,220,1130,4424,
#Partially deleted in new
chr1	205579565	205600802	chr1:205579565-205600802	1	+	205579685	205600461	789624	9	384,261,169,116,174,148,71,121,397,	0,1095,4389,5310,6468,12574,18214,19565,20840,
#Deleted in new
chr1	205579586	205584068	chr1:205579586-205584068	0	+	205579685	205584068	789624	2	363,114,	0,4368,
#Deleted in new
chr1	205579597	205580834	chr1:205579597-205580834	0	+	205579597	205579597	8553170	2	352,37,	0,1200,
#Partially deleted in new
chr1	205592036	205600550	chr1:205592036-205600550	0	+	205592036	205592036	8553170	4	251,71,121,145,	0,5743,7094,8369,
#Partially deleted in new
chr1	205592128	205598141	chr1:205592128-205598141	0	+	205592128	205592128	8553170	2	159,362,	0,5651,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	205595040	205595147	chr1:205595040-205595147	3	+	205595040	205595040	8553170	1	107,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	205597555	205631893	chr1:205597555-205631893	0	-	205616545	205623882	0	10	307,195,101,144,153,167,117,873,216,262,	0,899,2269,3095,5645,18922,21401,22410,26120,34076,
#Deleted in new
chr1	205597789	205600194	chr1:205597789-205600194	0	-	205597789	205597789	8553170	3	73,195,370,	0,665,2035,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	205598039	205602918	chr1:205598039-205602918	0	+	205598039	205598039	8553170	2	1212,2513,	0,2366,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	205607942	205631962	chr1:205607942-205631962	3	-	205616545	205623882	0	5	8702,117,873,216,331,	0,11014,12023,15733,23689,
#Partially deleted in new
chr1	205619267	205631962	chr1:205619267-205631962	1	-	205619827	205623882	0	3	1571,216,331,	0,4408,12364,
#Partially deleted in new
chr1	205620613	205625667	chr1:205620613-205625667	0	-	205620613	205623882	789624	3	225,216,36,	0,3062,5018,
#Partially deleted in new
chr1	205625482	205626153	chr1:205625482-205626153	7	+	205625482	205625482	16724991	2	182,171,	0,500,
#Partially deleted in new
chr1	205657850	205680459	chr1:205657850-205680459	3	-	205659233	205664656	789624	5	1821,266,786,402,66,	0,4010,4982,6634,22543,
#Deleted in new
chr1	205657850	205662668	chr1:205657850-205662668	0	-	205657850	205657850	8553170	3	1821,266,361,	0,4010,4457,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	205684017	205684307	chr1:205684017-205684307	3	+	205684017	205684017	8553170	1	290,	0,
#Partially deleted in new
chr1	205712818	205750276	chr1:205712818-205750276	3	-	205718279	205749973	789624	7	5661,150,153,56,106,50,320,	0,6708,7682,11107,14881,16753,37138,
#Deleted in new
chr1	205718451	205719726	chr1:205718451-205719726	0	-	205718451	205718451	8553170	2	28,200,	0,1075,
#Deleted in new
chr1	205731220	205731352	chr1:205731220-205731352	3	-	205731220	205731220	8553170	1	132,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	205767985	205775446	chr1:205767985-205775446	3	-	205770341	205774956	789624	6	2468,122,182,72,254,174,	0,2747,3486,4510,6847,7287,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	205769436	205775449	chr1:205769436-205775449	1	-	205770341	205774956	789624	6	1017,122,182,72,254,76,	0,1296,2035,3059,5396,5937,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	205769446	205775460	chr1:205769446-205775460	0	-	205770849	205774956	789624	4	1007,122,254,188,	0,1286,5386,5826,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	205769702	205775451	chr1:205769702-205775451	1	-	205770341	205771633	789624	5	751,122,182,72,179,	0,1030,1769,2793,5570,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	205769717	205775233	chr1:205769717-205775233	1	-	205770341	205774956	789624	4	736,122,182,401,	0,1015,1754,5115,
#Partially deleted in new
chr1	205770160	205775440	chr1:205770160-205775440	0	-	205770160	205770160	8553170	3	293,122,168,	0,572,5112,
#Partially deleted in new
chr1	205770299	205775459	chr1:205770299-205775459	1	-	205770341	205774956	789624	5	154,122,182,72,627,	0,433,1172,2196,4533,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	205771061	205775151	chr1:205771061-205775151	0	-	205771061	205771061	8553170	2	587,319,	0,3771,
#Partially deleted in new
chr1	205771597	205775209	chr1:205771597-205775209	0	-	205771597	205771597	8553170	3	56,72,81,	0,898,3531,
#Partially deleted in new
chr1	205775558	205783623	chr1:205775558-205783623	3	+	205775558	205775558	8553170	3	96,168,891,	0,724,7174,
#Partially deleted in new
chr1	205789092	205813176	chr1:205789092-205813176	3	-	205791532	205810441	789624	11	2626,149,135,80,148,147,145,72,108,1018,369,	0,5777,6251,7831,8811,9576,9864,10666,11860,20977,23715,
#Partially deleted in new
chr1	205789093	205801488	chr1:205789093-205801488	0	-	205789093	205789093	8553170	10	2625,149,135,80,148,147,145,72,108,168,	0,5776,6250,7830,8810,9575,9863,10665,11859,12227,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	205790919	205796616	chr1:205790919-205796616	0	-	205790919	205790919	8553170	3	799,149,1273,	0,3950,4424,
#Deleted in new
chr1	205810298	205813748	chr1:205810298-205813748	0	-	205810298	205810298	8553170	2	789,54,	0,3396,
#Partially deleted in new
chr1	205828021	205850117	chr1:205828021-205850117	3	-	205828619	205850072	789624	13	722,100,169,72,79,62,76,120,131,87,233,87,214,	0,2258,4576,12230,13789,14132,14654,15645,16065,16789,17303,19863,21882,
#Partially deleted in new
chr1	205828025	205850132	chr1:205828025-205850132	0	-	205828025	205828025	789624	12	718,100,169,72,79,76,120,131,87,233,87,229,	0,2254,4572,12226,13785,14650,15641,16061,16785,17299,19859,21878,
#Partially deleted in new
chr1	205828332	205830289	chr1:205828332-205830289	0	-	205828332	205828332	8553170	2	411,457,	0,1500,
#Partially deleted in new
chr1	205828352	205841879	chr1:205828352-205841879	0	-	205828352	205828352	8553170	4	391,100,72,69,	0,1927,11899,13458,
#Partially deleted in new
chr1	205913047	205935822	chr1:205913047-205935822	1	-	205914891	205935820	789624	21	2136,44,72,146,55,282,114,93,70,107,96,78,114,148,83,153,165,176,111,140,127,	0,2313,4235,5792,7128,8518,10034,10287,10496,11335,13487,14163,14444,14854,15779,16156,16844,18812,19654,19897,22648,
#Partially deleted in new
chr1	205913047	205943460	chr1:205913047-205943460	1	-	205915356	205935820	789624	21	2357,72,146,55,282,114,93,70,107,96,78,114,148,83,153,165,176,111,140,143,96,	0,4235,5792,7128,8518,10034,10287,10496,11335,13487,14163,14444,14854,15779,16156,16844,18812,19654,19897,22648,30317,
#Partially deleted in new
chr1	205913053	205943460	chr1:205913053-205943460	3	-	205914891	205935820	789624	22	2130,44,72,146,55,282,114,93,70,107,96,78,114,148,83,153,165,176,111,140,143,96,	0,2307,4229,5786,7122,8512,10028,10281,10490,11329,13481,14157,14438,14848,15773,16150,16838,18806,19648,19891,22642,30311,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	205913053	205928386	chr1:205913053-205928386	0	-	205913053	205913053	8553170	13	2351,72,146,55,282,114,93,70,107,96,78,114,485,	0,4229,5786,7122,8512,10028,10281,10490,11329,13481,14157,14438,14848,
#Deleted in new
chr1	205923150	205924745	chr1:205923150-205924745	0	-	205923150	205923150	8553170	4	45,93,70,363,	0,184,393,1232,
#Partially deleted in new
chr1	205927491	205930292	chr1:205927491-205930292	0	-	205927491	205927491	8553170	5	114,148,83,153,401,	0,410,1335,1712,2400,
#Deleted in new
chr1	205935127	205935768	chr1:205935127-205935768	3	+	205935127	205935127	8553170	2	69,161,	0,480,
#Partially deleted in new
chr1	205976739	206003413	chr1:205976739-206003413	3	-	205978850	205994135	789624	6	2189,126,216,127,69,161,	0,8800,15740,16680,17343,26513,
#Partially deleted in new
chr1	205976740	205994439	chr1:205976740-205994439	1	-	205978850	205994135	789624	5	2188,126,216,127,357,	0,8799,15739,16679,17342,
#Partially deleted in new
chr1	205976740	205994423	chr1:205976740-205994423	0	-	205978850	205994135	789624	6	518,1002,126,216,127,341,	0,1186,8799,15739,16679,17342,
#Partially deleted in new
chr1	205977698	206003461	chr1:205977698-206003461	1	-	205978850	205994135	789624	5	1230,216,127,69,209,	0,14781,15721,16384,25554,
#Partially deleted in new
chr1	205983742	205992580	chr1:205983742-205992580	0	-	205984156	205992580	789624	3	462,126,101,	0,1797,8737,
#Partially deleted in new
chr1	206009263	206023909	chr1:206009263-206023909	3	-	206010182	206023791	0	9	1084,99,142,123,200,119,118,157,186,	0,3044,3244,4508,6667,11785,12886,13637,14460,
#Partially deleted in new
chr1	206009264	206023895	chr1:206009264-206023895	1	-	206010139	206023791	0	8	1083,99,123,200,119,118,157,172,	0,3043,4507,6666,11784,12885,13636,14459,
#Partially deleted in new
chr1	206012330	206014130	chr1:206012330-206014130	0	-	206012330	206012330	8553170	2	76,359,	0,1441,
#Partially deleted in new
chr1	206013773	206021374	chr1:206013773-206021374	0	-	206013773	206013773	8553170	3	121,200,326,	0,2157,7275,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	206035252	206053226	chr1:206035252-206053226	7	+	206035252	206035252	16724991	4	47,125,149,206,	0,6313,16600,17768,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	206037230	206053137	chr1:206037230-206053137	4	+	206037230	206037230	16724991	3	69,260,117,	0,14511,15790,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	206037246	206053334	chr1:206037246-206053334	4	+	206037246	206037246	16724991	3	53,149,314,	0,14606,15774,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	206051790	206053101	chr1:206051790-206053101	4	+	206051790	206051790	16724991	2	211,81,	0,1230,
#Partially deleted in new
chr1	206051919	206061820	chr1:206051919-206061820	5	+	206051919	206051919	16724991	5	82,49,107,53,159,	0,8481,8807,9425,9742,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	206052722	206102459	chr1:206052722-206102459	3	+	206097828	206101952	789624	6	543,107,101,144,62,708,	0,45010,45358,46932,48413,49029,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	206052844	206062257	chr1:206052844-206062257	5	+	206052844	206052844	16724991	4	421,49,53,596,	0,7556,8500,8817,
#Deleted in new
chr1	206061157	206061913	chr1:206061157-206061913	4	+	206061157	206061157	16724991	2	240,252,	0,504,
#Deleted in new
chr1	206080238	206080324	chr1:206080238-206080324	3	+	206080238	206080238	8553170	1	86,	0,
#Partially deleted in new
chr1	206083562	206102007	chr1:206083562-206102007	1	+	206097828	206101952	789624	5	88,107,101,62,256,	0,14170,14518,17573,18189,
#Partially deleted in new
chr1	206083570	206101984	chr1:206083570-206101984	1	+	206097828	206101952	789624	6	80,107,101,144,62,233,	0,14162,14510,16084,17565,18181,
#Deleted in new
chr1	206097660	206098537	chr1:206097660-206098537	0	+	206097660	206097660	8553170	2	179,457,	0,420,
#Partially deleted in new
chr1	206097698	206102448	chr1:206097698-206102448	1	+	206097828	206101952	789624	5	141,101,144,62,697,	0,382,1956,3437,4053,
#Partially deleted in new
chr1	206109691	206117355	chr1:206109691-206117355	3	-	206110188	206116890	789624	2	832,1405,	0,6259,
#Partially deleted in new
chr1	206110014	206117699	chr1:206110014-206117699	0	-	206110014	206110014	8553170	2	509,36,	0,7649,
#Partially deleted in new
chr1	206117782	206126805	chr1:206117782-206126805	3	+	206117782	206117782	8553170	3	43,271,316,	0,287,8707,
#Deleted in new
chr1	206160886	206161276	chr1:206160886-206161276	7	-	206160886	206160886	16724991	1	390,	0,
#Partially deleted in new
chr1	206175059	206177246	chr1:206175059-206177246	3	-	206175059	206175059	8553170	2	123,148,	0,2039,
#Partially deleted in new
chr1	206186178	206202873	chr1:206186178-206202873	3	-	206187278	206202025	789624	4	1195,125,78,1000,	0,9573,13628,15695,
#Partially deleted in new
chr1	206186255	206202446	chr1:206186255-206202446	1	-	206187278	206202025	789624	4	1118,125,78,453,	0,9496,13551,15738,
#Partially deleted in new
chr1	206187122	206204065	chr1:206187122-206204065	1	-	206187278	206203995	789624	4	251,125,78,222,	0,8629,12684,16721,
#Partially deleted in new
chr1	206187165	206204414	chr1:206187165-206204414	0	-	206187165	206187165	8553170	4	208,125,78,163,	0,8586,12641,17086,
#Partially deleted in new
chr1	206187280	206202827	chr1:206187280-206202827	0	-	206187280	206201938	789624	5	93,125,78,132,312,	0,8471,12526,14593,15235,
#Partially deleted in new
chr1	206195839	206202851	chr1:206195839-206202851	0	-	206195839	206195839	8553170	4	37,78,16,242,	0,3967,6034,6770,
#Deleted in new
chr1	206201280	206202419	chr1:206201280-206202419	1	-	206201869	206202025	789624	1	1139,	0,
#Deleted in new
chr1	206203179	206204093	chr1:206203179-206204093	1	-	206203497	206203995	789624	2	379,250,	0,664,
#Partially deleted in new
chr1	206203344	206303473	chr1:206203344-206303473	0	+	206205970	206303473	789624	3	306,609,193,	0,2084,99936,
#Deleted in new
chr1	206203345	206205829	chr1:206203345-206205829	0	+	206203345	206203345	8553170	2	137,401,	0,2083,
#Deleted in new
chr1	206203887	206208229	chr1:206203887-206208229	0	+	206203887	206203887	8553170	1	4342,	0,
#Deleted in new
chr1	206203907	206205819	chr1:206203907-206205819	0	+	206203907	206203907	8553170	2	93,391,	0,1521,
#Partially deleted in new
chr1	206205625	206406709	chr1:206205625-206406709	1	+	206384049	206406598	789624	7	412,63,216,129,222,102,333,	0,178388,187063,187919,195798,199623,200751,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	206205672	206454700	chr1:206205672-206454700	1	+	206205970	206454156	789624	20	365,193,163,63,216,129,222,102,198,85,28,25,61,78,135,106,225,80,181,557,	0,97608,137173,178341,187016,187872,195751,199576,200704,210216,213700,215577,224489,231292,232291,234303,240402,244713,247527,248471,
#Partially deleted in new
chr1	206205908	206464443	chr1:206205908-206464443	3	+	206205970	206461420	0	22	129,193,163,63,216,129,225,102,198,85,28,25,61,78,135,106,225,80,181,147,325,3407,	0,97372,136937,178105,186780,187636,195512,199340,200468,209980,213464,215341,224253,231056,232055,234067,240166,244477,247291,248969,252714,255128,
#Partially deleted in new
chr1	206205908	206462850	chr1:206205908-206462850	1	+	206205970	206461420	789624	22	129,193,163,63,216,129,222,102,198,85,28,25,61,78,135,106,225,80,181,147,325,1814,	0,97372,136937,178105,186780,187636,195515,199340,200468,209980,213464,215341,224253,231056,232055,234067,240166,244477,247291,248969,252714,255128,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	206214504	206384066	chr1:206214504-206384066	0	+	206214504	206214504	8553170	5	107,50,193,163,53,	0,82315,88776,128341,169509,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	206214722	206392757	chr1:206214722-206392757	0	+	206303306	206392757	789624	5	118,193,55,63,69,	0,88558,128123,169291,177966,
#Partially deleted in new
chr1	206312147	206392904	chr1:206312147-206392904	0	+	206312147	206312147	8553170	4	100,163,63,216,	0,30698,71866,80541,
#Deleted in new
chr1	206333326	206333438	chr1:206333326-206333438	7	-	206333326	206333326	16724991	1	112,	0,
#Deleted in new
chr1	206404962	206408031	chr1:206404962-206408031	0	+	206404962	206404962	8553170	2	388,1655,	0,1414,
#Partially deleted in new
chr1	206406376	206456159	chr1:206406376-206456159	0	+	206406376	206455028	789624	12	198,85,28,25,61,78,135,106,225,80,181,1282,	0,9512,12996,14873,23785,30588,31587,33599,39698,44009,46823,48501,
#Partially deleted in new
chr1	206437618	206446204	chr1:206437618-206446204	0	+	206437618	206437618	8553170	3	480,106,130,	0,2357,8456,
#Partially deleted in new
chr1	206440060	206456131	chr1:206440060-206456131	0	+	206440060	206455791	789624	6	21,225,80,181,147,359,	0,6014,10325,13139,14817,15712,
#Partially deleted in new
chr1	206453198	206461227	chr1:206453198-206461227	0	+	206453198	206461227	789624	5	182,147,39,325,191,	0,1679,5172,5424,7838,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	206453660	206456159	chr1:206453660-206456159	0	+	206453660	206453660	8553170	1	2499,	0,
#Partially deleted in new
chr1	206470475	206478297	chr1:206470475-206478297	0	+	206470475	206470475	8553170	8	223,90,119,141,130,182,161,549,	0,680,2720,3855,4389,5705,6202,7273,
#Partially deleted in new
chr1	206470494	206496274	chr1:206470494-206496274	1	+	206473227	206493961	789624	21	204,90,119,141,130,182,161,111,180,191,65,92,87,76,113,77,40,102,97,72,163,	0,661,2701,3836,4370,5686,6183,7254,7665,8448,9375,9527,9952,14502,14699,17419,20324,21153,22528,23425,25617,
#Partially deleted in new
chr1	206470494	206496889	chr1:206470494-206496889	3	+	206473227	206496145	789624	22	204,90,119,141,130,182,161,111,180,191,65,92,87,76,113,77,40,102,97,113,72,778,	0,661,2701,3836,4370,5686,6183,7254,7665,8448,9375,9527,9952,14502,14699,17419,20324,21153,22528,22771,23425,25617,
#Partially deleted in new
chr1	206470494	206496274	chr1:206470494-206496274	1	+	206474891	206496145	789624	21	204,90,141,130,182,161,111,180,191,65,92,87,76,113,77,40,102,97,113,72,163,	0,661,3836,4370,5686,6183,7254,7665,8448,9375,9527,9952,14502,14699,17419,20324,21153,22528,22771,23425,25617,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	206470641	206475135	chr1:206470641-206475135	1	+	206473227	206475098	789624	5	57,90,119,141,271,	0,514,2554,3689,4223,
#Partially deleted in new
chr1	206472853	206476260	chr1:206472853-206476260	0	+	206473227	206476260	789624	5	110,119,141,130,80,	0,342,1477,2011,3327,
#Deleted in new
chr1	206474802	206474864	chr1:206474802-206474864	3	+	206474802	206474802	5263520	1	62,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	206491115	206497728	chr1:206491115-206497728	3	-	206491115	206491115	8553170	2	1961,135,	0,6478,
#Deleted in new
chr1	206503947	206504456	chr1:206503947-206504456	3	+	206503947	206503947	8553170	1	509,	0,
#Partially deleted in new
chr1	206507529	206587712	chr1:206507529-206587712	3	+	206507602	206586978	0	6	530,122,111,298,116,887,	0,30642,75739,76857,77650,79296,
#Partially deleted in new
chr1	206507545	206587712	chr1:206507545-206587712	1	+	206507602	206586848	0	5	514,122,111,298,887,	0,30626,75723,76841,79280,
#Partially deleted in new
chr1	206507594	206589274	chr1:206507594-206589274	1	+	206507602	206584749	789624	4	465,122,111,4888,	0,30577,75674,76792,
#Partially deleted in new
chr1	206518387	206589448	chr1:206518387-206589448	1	+	206518387	206586978	789624	6	157,122,111,298,116,2623,	0,19784,64881,65999,66792,68438,
#Deleted in new
chr1	206528914	206529706	chr1:206528914-206529706	7	+	206528914	206528914	16724991	1	792,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	206541757	206544892	chr1:206541757-206544892	3	+	206541757	206541757	8553170	1	3135,	0,
#Partially deleted in new
chr1	206557164	206589267	chr1:206557164-206589267	1	+	206557573	206586978	0	5	529,111,298,116,2442,	0,26104,27222,28015,29661,
#Partially deleted in new
chr1	206557560	206583695	chr1:206557560-206583695	0	+	206557560	206557560	8553170	2	133,427,	0,25708,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	206571291	206597116	chr1:206571291-206597116	0	-	206581111	206597116	789624	6	202,105,77,228,121,17,	0,1303,9400,9643,24426,25808,
#Deleted in new
chr1	206583119	206586842	chr1:206583119-206586842	0	+	206583119	206583119	8553170	3	260,298,17,	0,1267,3706,
#Deleted in new
chr1	206583271	206589272	chr1:206583271-206589272	0	+	206583271	206585331	789624	3	108,298,4093,	0,1115,1908,
#Deleted in new
chr1	206584474	206589283	chr1:206584474-206589283	0	+	206584474	206584474	8553170	2	821,2458,	0,2351,
#Partially deleted in new
chr1	206591641	206612459	chr1:206591641-206612459	3	-	206591774	206612342	0	15	204,175,121,96,90,150,104,46,118,254,108,91,84,191,173,	0,1977,4076,5458,7361,7821,8091,8621,10694,11309,13758,16594,17734,19542,20645,
#Partially deleted in new
chr1	206591641	206612459	chr1:206591641-206612459	1	-	206591774	206612342	0	13	204,175,121,96,90,150,104,46,108,91,84,191,173,	0,1977,4076,5458,7361,7821,8091,8621,13758,16594,17734,19542,20645,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	206594039	206603501	chr1:206594039-206603501	0	-	206594039	206594039	8553170	4	1799,96,90,3239,	0,3060,4963,6223,
#Partially deleted in new
chr1	206595709	206609404	chr1:206595709-206609404	0	-	206597187	206609404	789624	6	129,96,90,46,47,29,	0,1390,3293,4553,12570,13666,
#Partially deleted in new
chr1	206595717	206602958	chr1:206595717-206602958	0	-	206599065	206602958	789624	6	121,96,90,46,118,8,	0,1382,3285,4545,6618,7233,
#Partially deleted in new
chr1	206595830	206599810	chr1:206595830-206599810	0	-	206595830	206595830	8553170	4	8,96,90,348,	0,1269,3172,3632,
#Partially deleted in new
chr1	206602341	206612450	chr1:206602341-206612450	0	-	206602341	206612342	789624	6	112,254,108,91,191,164,	0,609,3058,5894,8842,9945,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	206604732	206612463	chr1:206604732-206612463	0	-	206604732	206604732	8553170	5	775,47,84,191,177,	0,3547,4643,6451,7554,
#Partially deleted in new
chr1	206609375	206612459	chr1:206609375-206612459	0	-	206609375	206609375	8553170	3	84,227,173,	0,1772,2911,
#Deleted in new
chr1	206634648	206635622	chr1:206634648-206635622	3	-	206634648	206634648	8553170	2	335,23,	0,951,
#Partially deleted in new
chr1	206635535	206649193	chr1:206635535-206649193	3	+	206635703	206648965	0	3	245,112,1806,	0,2114,11852,
#Partially deleted in new
chr1	206635578	206649197	chr1:206635578-206649197	1	+	206636951	206648965	0	4	202,94,112,1810,	0,1296,2071,11809,
#Partially deleted in new
chr1	206635727	206684419	chr1:206635727-206684419	0	+	206635727	206635727	8553170	4	53,94,112,1513,	0,1147,1922,47179,
#Partially deleted in new
chr1	206635773	206647989	chr1:206635773-206647989	0	+	206636951	206647989	789624	4	62,94,112,602,	0,1101,1876,11614,
#Partially deleted in new
chr1	206635828	206649114	chr1:206635828-206649114	1	+	206636951	206648965	0	4	396,94,112,1727,	0,1046,1821,11559,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	206684943	206732863	chr1:206684943-206732863	3	+	206685229	206732091	0	10	565,140,65,80,127,76,125,86,81,826,	0,43766,44091,44452,45028,45744,46194,46696,46895,47094,
#Partially deleted in new
chr1	206685036	206734283	chr1:206685036-206734283	1	+	206685229	206732718	0	10	472,140,65,80,127,76,125,86,81,1709,	0,43673,43998,44359,44935,45651,46101,46603,46802,47538,
#Deleted in new
chr1	206695836	206696269	chr1:206695836-206696269	7	-	206695836	206695836	16724991	1	433,	0,
#Deleted in new
chr1	206728933	206729470	chr1:206728933-206729470	0	+	206728933	206728933	8553170	2	166,75,	0,462,
#Deleted in new
chr1	206731287	206732116	chr1:206731287-206732116	0	+	206731287	206731287	8553170	2	438,311,	0,518,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	206767601	206772494	chr1:206767601-206772494	3	-	206768635	206772435	0	5	1127,66,153,60,224,	0,2227,3305,3754,4669,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	206767601	206770575	chr1:206767601-206770575	0	-	206767601	206767601	8553170	3	1127,66,177,	0,2227,2797,
#Deleted in new
chr1	206768694	206771199	chr1:206768694-206771199	0	-	206768694	206771029	789624	3	34,66,293,	0,1134,2212,
#Deleted in new
chr1	206769620	206771189	chr1:206769620-206771189	0	-	206769620	206769620	8553170	2	274,283,	0,1286,
#Partially deleted in new
chr1	206798869	206842981	chr1:206798869-206842981	3	+	206798894	206842622	0	6	137,146,66,153,75,455,	0,37791,38088,40980,42134,43657,
#Partially deleted in new
chr1	206833707	206842979	chr1:206833707-206842979	1	+	206836662	206842622	0	6	693,146,66,153,75,453,	0,2953,3250,6142,7296,8819,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	206836662	206840614	chr1:206836662-206840614	0	+	206836662	206836662	8553170	3	144,66,765,	0,295,3187,
#Deleted in new
chr1	206865353	206869223	chr1:206865353-206869223	3	+	206865852	206868564	0	6	333,189,66,153,75,737,	0,469,945,1130,2030,3133,
#Deleted in new
chr1	206865808	206868914	chr1:206865808-206868914	1	+	206865852	206868564	0	5	203,66,153,75,428,	0,490,675,1575,2678,
#Deleted in new
chr1	206865808	206869217	chr1:206865808-206869217	1	+	206865852	206868564	0	4	203,66,153,731,	0,490,675,2678,
#Partially deleted in new
chr1	206897442	206903480	chr1:206897442-206903480	1	+	206897832	206903059	789624	7	173,146,199,63,159,75,505,	0,288,1874,2852,4051,4555,5533,
#Partially deleted in new
chr1	206897442	206904139	chr1:206897442-206904139	1	+	206897832	206902985	789624	5	173,146,63,75,1164,	0,288,2852,4555,5533,
#Partially deleted in new
chr1	206897443	206903865	chr1:206897443-206903865	3	+	206897832	206903059	789624	7	172,146,196,63,159,75,890,	0,287,1876,2851,4050,4554,5532,
#Partially deleted in new
chr1	206897443	206904139	chr1:206897443-206904139	1	+	206897832	206903059	789624	6	172,146,199,63,75,1164,	0,287,1873,2851,4554,5532,
#Partially deleted in new
chr1	206897443	206904139	chr1:206897443-206904139	0	+	206897832	206901542	789624	6	172,146,63,159,75,1164,	0,287,2851,4050,4554,5532,
#Partially deleted in new
chr1	206897464	206903150	chr1:206897464-206903150	0	+	206897464	206897464	8553170	5	151,63,159,75,175,	0,2830,4029,4533,5511,
#Partially deleted in new
chr1	206897832	206902072	chr1:206897832-206902072	0	+	206897832	206902072	789624	3	44,63,75,	0,2462,4165,
#Partially deleted in new
chr1	206904385	206921998	chr1:206904385-206921998	3	-	206905018	206921854	789624	8	762,59,144,131,223,114,336,181,	0,5076,5339,5824,7344,8543,9373,17432,
#Deleted in new
chr1	206904524	206909945	chr1:206904524-206909945	0	-	206904524	206904524	8553170	3	623,59,221,	0,4937,5200,
#Partially deleted in new
chr1	206904558	206921998	chr1:206904558-206921998	1	-	206905018	206921854	789624	7	589,59,144,131,223,114,181,	0,4903,5166,5651,7171,8370,17259,
#Partially deleted in new
chr1	206904713	206921955	chr1:206904713-206921955	0	-	206904713	206904713	8553170	2	434,138,	0,17104,
#Partially deleted in new
chr1	206904893	206921941	chr1:206904893-206921941	0	-	206912934	206921854	789624	8	254,59,144,131,223,114,233,124,	0,4568,4831,5316,6836,8035,8968,16924,
#Partially deleted in new
chr1	206905018	206921867	chr1:206905018-206921867	1	-	206905139	206921854	789624	7	129,59,144,223,114,336,50,	0,4443,4706,6711,7910,8740,16799,
#Deleted in new
chr1	206905927	206906393	chr1:206905927-206906393	7	+	206905927	206905927	16724991	1	466,	0,
#Deleted in new
chr1	206907618	206908229	chr1:206907618-206908229	7	+	206907618	206907618	16724991	1	611,	0,
#Partially deleted in new
chr1	206912962	206923196	chr1:206912962-206923196	0	-	206912962	206921854	789624	4	80,336,128,50,	0,796,8855,10184,
#Partially deleted in new
chr1	206912972	206923247	chr1:206912972-206923247	0	-	206912972	206921854	789624	4	70,336,73,101,	0,786,8845,10174,
#Partially deleted in new
chr1	206913631	206921941	chr1:206913631-206921941	0	-	206913631	206913631	8553170	2	463,124,	0,8186,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	206928517	206946466	chr1:206928517-206946466	3	-	206930317	206940531	0	11	1896,59,132,122,181,327,333,657,345,96,131,	0,2979,3153,3938,4468,5902,6968,8577,10601,11971,17818,
#Deleted in new
chr1	206931433	206931833	chr1:206931433-206931833	0	-	206931433	206931433	8553170	2	122,163,	0,237,
#Deleted in new
chr1	206937545	206939466	chr1:206937545-206939466	0	-	206937545	206937545	8553170	2	206,57,	0,1864,
#Partially deleted in new
chr1	206957964	206970460	chr1:206957964-206970460	0	-	206969244	206970125	789624	9	712,119,802,339,144,61,69,132,374,	0,1714,2457,4248,7750,9087,9618,11262,12122,
#Partially deleted in new
chr1	206957966	206970625	chr1:206957966-206970625	3	-	206958649	206970125	789624	8	710,119,339,144,61,69,134,322,	0,1712,4246,7748,9085,9616,12120,12337,
#Partially deleted in new
chr1	206958119	206970600	chr1:206958119-206970600	1	-	206958515	206970125	789624	8	557,119,802,339,144,61,69,514,	0,1559,2302,4093,7595,8932,9463,11967,
#Partially deleted in new
chr1	206958164	206970149	chr1:206958164-206970149	1	-	206958649	206970125	789624	7	512,119,339,144,61,69,63,	0,1514,4048,7550,8887,9418,11922,
#Partially deleted in new
chr1	206958507	206960835	chr1:206958507-206960835	0	-	206958507	206958507	8553170	2	169,1157,	0,1171,
#Partially deleted in new
chr1	206962292	206970482	chr1:206962292-206970482	0	-	206962292	206962292	8553170	6	259,144,61,69,134,179,	0,3422,4759,5290,7794,8011,
#Partially deleted in new
chr1	206962354	206970500	chr1:206962354-206970500	0	-	206962354	206962354	8553170	5	197,144,61,69,414,	0,3360,4697,5228,7732,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	207018520	207032747	chr1:207018520-207032747	3	-	207021957	207027598	789624	4	4960,178,186,169,	0,6366,8973,14058,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	207020694	207032756	chr1:207020694-207032756	1	-	207021957	207023025	789624	3	2786,178,178,	0,4192,11884,
#Partially deleted in new
chr1	207034365	207063209	chr1:207034365-207063209	0	+	207054717	207063209	789624	6	107,44,102,126,97,67,	0,7803,20335,27587,28254,28777,
#Partially deleted in new
chr1	207034415	207079134	chr1:207034415-207079134	0	+	207054717	207062626	789624	17	57,44,154,102,126,170,67,75,57,125,208,147,105,130,63,65,181,	0,7753,15048,20285,27537,28131,28727,28931,29357,30620,33083,33747,35008,35864,36772,37093,44538,
#Partially deleted in new
chr1	207034415	207049635	chr1:207034415-207049635	0	+	207034415	207034415	8553170	5	57,135,44,143,172,	0,530,7753,14741,15048,
#Partially deleted in new
chr1	207034415	207062014	chr1:207034415-207062014	0	+	207054717	207062014	789624	6	57,135,44,154,102,62,	0,530,7753,15048,20285,27537,
#Deleted in new
chr1	207043848	207051077	chr1:207043848-207051077	3	-	207049019	207051030	0	2	5875,390,	0,6839,
#Partially deleted in new
chr1	207043848	207052980	chr1:207043848-207052980	1	-	207049019	207052235	0	4	5875,160,139,117,	0,6839,8336,9015,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	207053259	207077823	chr1:207053259-207077823	3	+	207054717	207072371	0	15	107,102,126,97,67,75,57,125,208,147,105,130,63,65,5620,	0,1441,8693,9360,9883,10087,10513,11776,14239,14903,16164,17020,17928,18249,18944,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	207053274	207063167	chr1:207053274-207063167	0	+	207054717	207060895	789624	6	92,102,85,126,97,21,	0,1426,7571,8678,9345,9872,
#Partially deleted in new
chr1	207053282	207054955	chr1:207053282-207054955	0	+	207053282	207053282	8553170	2	84,255,	0,1418,
#Partially deleted in new
chr1	207053310	207081024	chr1:207053310-207081024	1	+	207054717	207079019	0	15	56,102,126,97,67,75,57,125,208,147,105,130,63,65,2071,	0,1390,8642,9309,9832,10036,10462,11725,14188,14852,16113,16969,17877,18198,25643,
#Partially deleted in new
chr1	207069423	207079675	chr1:207069423-207079675	0	+	207069423	207069423	8553170	3	105,65,722,	0,2085,9530,
#Deleted in new
chr1	207070644	207075565	chr1:207070644-207075565	0	+	207070644	207070644	8553170	4	120,63,65,306,	0,543,864,4615,
#Partially deleted in new
chr1	207088841	207099993	chr1:207088841-207099993	3	+	207089531	207099929	789624	7	105,108,174,177,94,115,205,	0,640,1466,2802,7680,9308,10947,
#Partially deleted in new
chr1	207088893	207091872	chr1:207088893-207091872	0	+	207088893	207088893	8553170	4	53,108,174,229,	0,588,1414,2750,
#Partially deleted in new
chr1	207089212	207098189	chr1:207089212-207098189	0	+	207089531	207098189	789624	6	149,108,174,177,94,40,	0,269,1095,2431,7309,8937,
#Partially deleted in new
chr1	207089237	207099993	chr1:207089237-207099993	1	+	207089531	207099929	789624	6	352,174,177,94,115,205,	0,1070,2406,7284,8912,10551,
#Partially deleted in new
chr1	207089238	207099993	chr1:207089238-207099993	1	+	207089531	207099929	789624	6	351,171,177,94,115,205,	0,1072,2405,7283,8911,10550,
#Partially deleted in new
chr1	207089282	207099990	chr1:207089282-207099990	1	+	207089531	207099929	789624	7	79,108,174,177,94,115,202,	0,199,1025,2361,7239,8867,10506,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	207094933	207099983	chr1:207094933-207099983	0	+	207094933	207094933	8553170	3	1682,115,195,	0,3216,4855,
#Partially deleted in new
chr1	207097817	207099993	chr1:207097817-207099993	0	+	207097817	207097817	8553170	2	447,205,	0,1971,
#Partially deleted in new
chr1	207104261	207144972	chr1:207104261-207144972	3	+	207113025	207144717	0	12	169,167,186,100,86,192,183,195,189,171,176,429,	0,8739,9838,11154,19660,19913,22451,27284,30142,36844,39556,40282,
#Partially deleted in new
chr1	207104305	207123949	chr1:207104305-207123949	0	+	207113025	207123949	789624	5	125,269,186,100,28,	0,8593,9794,11110,19616,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	207104377	207115465	chr1:207104377-207115465	0	+	207113025	207114704	789624	5	53,167,186,96,50,	0,8623,9722,10298,11038,
#Deleted in new
chr1	207127009	207127486	chr1:207127009-207127486	3	-	207127009	207127009	8553170	1	477,	0,
#Deleted in new
chr1	207150204	207150281	chr1:207150204-207150281	7	-	207150204	207150204	16724991	1	77,	0,
#Partially deleted in new
chr1	207165495	207183910	chr1:207165495-207183910	7	+	207165495	207165495	16724991	11	157,180,108,84,195,183,198,195,168,176,249,	0,1099,1826,6128,6383,8121,9641,13167,15879,17052,18166,
#Partially deleted in new
chr1	207179295	207184062	chr1:207179295-207184062	3	+	207179295	207179295	8553170	4	200,168,176,401,	0,2079,3252,4366,
#Partially deleted in new
chr1	207225797	207229202	chr1:207225797-207229202	7	+	207225797	207225797	16724991	3	160,202,116,	0,2503,3289,
#Partially deleted in new
chr1	207240121	207309292	chr1:207240121-207309292	3	+	207240121	207240121	8553170	4	72,104,138,826,	0,4311,61648,68345,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	207249066	207309121	chr1:207249066-207309121	0	+	207249066	207249066	8553170	4	84,40,138,655,	0,15930,52703,59400,
#Partially deleted in new
chr1	207321375	207360966	chr1:207321375-207360966	3	+	207321765	207359610	0	10	490,186,192,100,86,189,126,81,21,1421,	0,1006,3183,4246,5376,9732,15317,15953,18021,38170,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	207321531	207340766	chr1:207321531-207340766	1	+	207321765	207340644	789624	10	334,186,192,100,86,189,126,81,21,376,	0,850,3027,4090,5220,9576,15161,15797,17865,18859,
#Partially deleted in new
chr1	207321642	207359713	chr1:207321642-207359713	1	+	207321765	207359610	789624	9	223,186,100,86,189,126,81,21,168,	0,739,3979,5109,9465,15050,15686,17754,37903,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	207321642	207360336	chr1:207321642-207360336	1	+	207321765	207359669	0	11	223,186,192,100,86,189,126,81,21,115,791,	0,739,2916,3979,5109,9465,15050,15686,17754,25804,37903,
#Partially deleted in new
chr1	207321732	207359767	chr1:207321732-207359767	1	+	207321765	207359610	789624	10	133,186,192,100,86,189,251,463,21,222,	0,649,2826,3889,5019,9375,14960,15214,17664,37813,
#Partially deleted in new
chr1	207321747	207359876	chr1:207321747-207359876	1	+	207321765	207354080	0	11	118,186,192,100,86,189,126,81,21,93,331,	0,634,2811,3874,5004,9360,14945,15581,17649,32259,37798,
#Partially deleted in new
chr1	207321790	207336788	chr1:207321790-207336788	0	+	207321790	207336788	789624	8	75,54,186,192,100,86,189,96,	0,445,591,2768,3831,4961,9317,14902,
#Partially deleted in new
chr1	207324657	207359713	chr1:207324657-207359713	0	+	207324657	207324657	8553170	8	93,100,86,189,717,21,106,168,	0,964,2094,6450,12035,14739,33858,34888,
#Partially deleted in new
chr1	207324657	207360502	chr1:207324657-207360502	0	+	207324657	207324657	8553170	7	93,100,86,189,717,21,957,	0,964,2094,6450,12035,14739,34888,
#Partially deleted in new
chr1	207324657	207337659	chr1:207324657-207337659	0	+	207324657	207324657	8553170	6	93,100,86,189,126,331,	0,964,2094,6450,12035,12671,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	207336753	207386804	chr1:207336753-207386804	0	+	207336753	207385238	789624	5	65,81,21,185,599,	0,575,2643,48468,49452,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	207401690	207416236	chr1:207401690-207416236	3	-	207401690	207401690	8553170	3	194,100,185,	0,3161,14361,
#Partially deleted in new
chr1	207454229	207489895	chr1:207454229-207489895	1	+	207454418	207485554	0	20	247,387,189,100,83,408,177,91,77,408,177,85,83,393,186,186,24,76,109,754,	0,12296,14297,14570,14920,15465,16510,16767,17193,18542,19315,19571,20011,20594,22004,23655,25027,25748,31234,34912,
#Partially deleted in new
chr1	207454229	207489895	chr1:207454229-207489895	3	+	207454418	207485554	0	19	247,387,189,100,83,408,177,91,77,408,85,83,393,186,186,24,76,109,754,	0,12296,14297,14570,14920,15465,16510,16767,17193,18542,19571,20011,20594,22004,23655,25027,25748,31234,34912,
#Partially deleted in new
chr1	207454229	207489895	chr1:207454229-207489895	1	+	207454418	207485554	789624	18	247,387,189,100,83,408,177,91,77,408,85,83,393,186,24,76,109,754,	0,12296,14297,14570,14920,15465,16510,16767,17193,18542,19571,20011,20594,23655,25027,25748,31234,34912,
#Partially deleted in new
chr1	207454650	207466756	chr1:207454650-207466756	0	+	207454650	207454650	8553170	2	305,231,	0,11875,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	207468305	207469933	chr1:207468305-207469933	0	+	207468305	207468305	8553170	4	410,100,83,239,	0,494,844,1389,
#Deleted in new
chr1	207471014	207471972	chr1:207471014-207471972	0	+	207471014	207471014	8553170	3	73,77,119,	0,408,839,
#Partially deleted in new
chr1	207471067	207472902	chr1:207471067-207472902	1	+	207471067	207472871	789624	2	20,131,	0,1704,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	207496146	207559484	chr1:207496146-207559484	0	+	207496146	207496146	8553170	13	242,180,100,86,399,177,103,86,219,180,100,86,435,	0,9757,10567,15422,27464,49161,49429,51124,54588,55817,56605,62391,62903,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr1	207496146	207641765	chr1:207496146-207641765	1	+	207496267	207639409	789624	39	242,180,100,86,399,177,103,86,219,180,100,86,399,177,103,86,219,180,100,86,399,177,103,86,228,180,100,86,399,177,103,86,228,177,186,24,76,105,2369,	0,9757,10567,15422,27464,30606,30874,32569,36033,37262,38050,43834,46035,67717,67985,69691,71677,72912,73700,79448,81658,84093,84364,85771,88502,91239,92528,111104,113143,115530,115792,118257,120428,121924,123733,125826,126846,134370,143250,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	207496237	207507610	chr1:207496237-207507610	0	+	207496237	207496237	8553170	3	151,180,897,	0,9666,10476,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr1	207496242	207640212	chr1:207496242-207640212	1	+	207496267	207639409	789624	39	146,180,100,86,399,177,103,86,219,180,100,86,399,177,103,86,219,180,100,86,399,177,103,86,228,180,100,86,399,177,103,86,228,177,186,24,76,105,816,	0,9661,10471,15326,45939,49065,49333,51028,54492,55721,56509,62295,64496,67621,67889,69595,71581,72816,73604,79352,81562,83997,84268,85675,88406,91143,92432,111008,113047,115434,115696,118161,120332,121828,123637,125730,126750,134274,143154,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr1	207496242	207640212	chr1:207496242-207640212	1	+	207496267	207639409	789624	39	146,180,100,86,399,177,103,86,219,180,100,86,399,177,103,86,219,180,100,86,399,177,103,86,228,180,100,86,399,177,103,86,228,177,186,24,76,105,816,	0,9661,10471,15326,27368,30510,30778,32473,35937,37166,37954,43738,45939,49065,49333,51028,54492,55721,56509,79352,81562,83997,84268,85675,88406,91143,92432,111008,113047,115434,115696,118161,120332,121828,123637,125730,126750,134274,143154,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr1	207496242	207640212	chr1:207496242-207640212	1	+	207496267	207639409	789624	39	146,180,100,86,399,177,103,86,219,180,100,86,399,177,103,86,219,180,100,86,399,177,103,86,228,180,100,86,399,177,103,86,228,177,186,24,76,105,816,	0,9661,10471,15326,27368,30510,30778,32473,35937,37166,37954,43738,64496,67621,67889,69595,71581,72816,73604,79352,81562,83997,84268,85675,88406,91143,92432,111008,113047,115434,115696,118161,120332,121828,123637,125730,126750,134274,143154,
#Partially deleted in new
chr1	207496260	207609546	chr1:207496260-207609546	0	+	207496267	207569122	789624	23	128,180,100,86,399,177,103,86,219,180,100,180,100,86,399,177,103,86,228,180,100,86,257,	0,9643,10453,15308,27350,49047,49315,51010,54474,55703,56491,72798,73586,79334,81544,83979,84250,85657,88388,91125,92414,110990,113029,
#Partially deleted in new
chr1	207496267	207639409	chr1:207496267-207639409	3	+	207496267	207639409	789624	47	121,180,100,86,399,177,103,86,219,180,100,86,399,177,103,86,219,180,100,86,399,177,103,86,219,180,100,86,399,177,103,86,228,180,100,86,399,177,103,86,228,177,186,24,76,105,13,	0,9636,10446,15301,27343,30485,30753,32448,35912,37141,37929,43713,45914,49040,49308,51003,54467,55696,56484,62270,64471,67596,67864,69570,71556,72791,73579,79327,81537,83972,84243,85650,88381,91118,92407,110983,113022,115409,115671,118136,120307,121803,123612,125705,126725,134249,143129,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	207496340	207534995	chr1:207496340-207534995	0	+	207496340	207496340	8553170	11	48,180,100,86,399,177,103,86,219,180,799,	0,9563,10373,15228,27270,30412,30680,32375,35839,37068,37856,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	207496340	207570645	chr1:207496340-207570645	0	+	207496340	207496340	8553170	11	48,180,100,86,399,177,103,86,219,180,799,	0,9563,10373,15228,64398,67523,67791,69497,71483,72718,73506,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	207496340	207570645	chr1:207496340-207570645	0	+	207496340	207496340	8553170	11	48,180,100,86,399,177,103,86,219,180,799,	0,9563,10373,15228,27270,30412,49235,50930,71483,72718,73506,
#Partially deleted in new
chr1	207496340	207630627	chr1:207496340-207630627	0	+	207496340	207630627	789624	14	48,180,100,86,399,177,103,86,228,177,186,24,76,111,	0,9563,10373,15228,27270,48967,67791,69497,120234,121730,123539,125632,126652,134176,
#Deleted in new
chr1	207551924	207552979	chr1:207551924-207552979	1	-	207551924	207551924	8553170	2	425,257,	0,798,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	207552722	207606555	chr1:207552722-207606555	0	-	207552722	207552722	8553170	4	258,161,103,88,	0,46123,53158,53745,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	207569835	207606555	chr1:207569835-207606555	0	-	207569835	207569835	8553170	4	240,161,103,88,	0,29010,36045,36632,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	207569967	207606555	chr1:207569967-207606555	3	-	207569967	207569967	8553170	5	108,161,231,103,63,	0,28878,30657,35913,36525,
#Partially deleted in new
chr1	207645112	207684036	chr1:207645112-207684036	0	+	207645112	207645112	8553170	4	218,180,100,165,	0,32276,33085,38759,
#Partially deleted in new
chr1	207645173	207723703	chr1:207645173-207723703	3	+	207645233	207723685	789624	12	157,180,100,86,399,177,103,86,100,86,228,86,	0,32215,33024,38698,49179,52329,52597,54015,56345,63004,72290,78444,
#Partially deleted in new
chr1	207645233	207657410	chr1:207645233-207657410	7	+	207645233	207645233	16724991	5	97,189,103,86,288,	0,7313,7845,9956,11889,
#Deleted in new
chr1	207658453	207659142	chr1:207658453-207659142	7	+	207658453	207658453	16724991	1	689,	0,
#Partially deleted in new
chr1	207669115	207678267	chr1:207669115-207678267	0	+	207669115	207669115	8553170	3	101,180,70,	0,8273,9082,
#Partially deleted in new
chr1	207669438	207710818	chr1:207669438-207710818	0	+	207669438	207669438	8553170	5	127,180,100,86,437,	0,7950,8759,14433,40943,
#Partially deleted in new
chr1	207677459	207738416	chr1:207677459-207738416	0	+	207677459	207715318	789624	13	109,100,86,399,177,103,86,100,86,228,24,76,13,	0,738,6412,16893,20043,20311,21729,24059,37852,40004,46158,47173,60944,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	207708897	207708981	chr1:207708897-207708981	3	-	207708897	207708897	8553170	1	84,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	207709023	207711508	chr1:207709023-207711508	3	-	207709023	207709023	8553170	3	213,191,152,	0,1450,2333,
#Partially deleted in new
chr1	207752056	207795513	chr1:207752056-207795513	3	+	207752212	207793591	0	13	253,189,103,86,198,183,45,45,42,39,36,64,1995,	0,4957,5483,7582,9192,14956,15550,15722,18264,31235,33014,33562,41462,
#Partially deleted in new
chr1	207752056	207795513	chr1:207752056-207795513	1	+	207752212	207793595	0	10	253,189,103,86,198,183,42,39,36,1995,	0,4957,5483,7582,9192,14956,18264,31235,33014,41462,
#Partially deleted in new
chr1	207752056	207795513	chr1:207752056-207795513	1	+	207752212	207793591	0	12	253,189,103,86,198,183,45,42,39,36,64,1995,	0,4957,5483,7582,9192,14956,15722,18264,31235,33014,33562,41462,
#Partially deleted in new
chr1	207752056	207795513	chr1:207752056-207795513	1	+	207752212	207793591	0	11	253,189,103,86,198,183,42,39,36,64,1995,	0,4957,5483,7582,9192,14956,18264,31235,33014,33562,41462,
#Partially deleted in new
chr1	207752056	207795513	chr1:207752056-207795513	1	+	207752212	207790304	0	14	253,189,103,86,198,183,45,45,42,39,36,64,93,1995,	0,4957,5483,7582,9192,14956,15550,15722,18264,31235,33014,33562,38196,41462,
#Partially deleted in new
chr1	207752056	207795513	chr1:207752056-207795513	1	+	207752212	207790304	0	12	253,189,103,86,198,183,42,39,36,64,93,1995,	0,4957,5483,7582,9192,14956,18264,31235,33014,33562,38196,41462,
#Partially deleted in new
chr1	207752056	207795513	chr1:207752056-207795513	1	+	207752212	207790304	0	13	253,189,103,86,198,183,45,42,39,36,64,93,1995,	0,4957,5483,7582,9192,14956,15722,18264,31235,33014,33562,38196,41462,
#Partially deleted in new
chr1	207752056	207795513	chr1:207752056-207795513	1	+	207752212	207793591	0	12	253,103,86,198,183,45,45,42,39,36,64,1995,	0,5483,7582,9192,14956,15550,15722,18264,31235,33014,33562,41462,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	207752067	207795513	chr1:207752067-207795513	0	+	207752067	207752067	8553170	9	242,189,103,1808,3350,39,36,64,1995,	0,4946,5472,7571,14945,31224,33003,33551,41451,
#Partially deleted in new
chr1	207752067	207759724	chr1:207752067-207759724	0	+	207752067	207752067	8553170	4	30,189,103,86,	0,4946,5472,7571,
#Partially deleted in new
chr1	207752114	207795506	chr1:207752114-207795506	1	+	207752212	207793591	0	10	195,189,103,86,198,183,39,36,64,1988,	0,4899,5425,7524,9134,14898,31177,32956,33504,41404,
#Partially deleted in new
chr1	207752122	207793646	chr1:207752122-207793646	1	+	207752212	207793591	0	11	187,189,103,86,198,183,45,39,36,64,128,	0,4891,5417,7516,9126,14890,15656,31169,32948,33496,41396,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	207760984	207767117	chr1:207760984-207767117	0	+	207760984	207760984	8553170	2	462,105,	0,6028,
#Deleted in new
chr1	207762583	207763263	chr1:207762583-207763263	7	+	207762583	207762583	16724991	1	680,	0,
#Partially deleted in new
chr1	207767204	207770362	chr1:207767204-207770362	0	+	207767204	207767204	8553170	2	619,42,	0,3116,
#Partially deleted in new
chr1	207768117	207794780	chr1:207768117-207794780	0	+	207768117	207768117	8553170	6	655,42,39,36,64,1262,	0,2203,15174,16953,17501,25401,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	207770040	207793873	chr1:207770040-207793873	0	+	207770040	207770040	8553170	6	322,39,36,27,93,355,	0,13251,15030,15615,20212,23478,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	207770052	207783728	chr1:207770052-207783728	0	+	207770052	207770052	8553170	2	310,437,	0,13239,
#Partially deleted in new
chr1	207770309	207786062	chr1:207770309-207786062	0	+	207770309	207770309	8553170	4	53,39,36,444,	0,12982,14761,15309,
#Partially deleted in new
chr1	207770338	207795224	chr1:207770338-207795224	0	+	207770338	207793591	789624	6	24,39,36,64,90,220,	0,12953,14732,15280,23180,24666,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	207801517	207869150	chr1:207801517-207869150	1	-	207801517	207801517	8553170	5	14563,176,185,98,123,	0,15721,17444,66408,67510,
#Deleted in new
chr1	207801851	207801939	chr1:207801851-207801939	3	-	207801851	207801851	5263520	1	88,	0,
#Deleted in new
chr1	207802442	207802523	chr1:207802442-207802523	3	-	207802442	207802442	5263520	1	81,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	207805246	207879096	chr1:207805246-207879096	3	-	207805246	207805246	8553170	8	160,93,152,176,98,194,80,217,	0,758,10682,11992,62679,64668,69643,73633,
#Deleted in new
chr1	207813559	207822703	chr1:207813559-207822703	0	-	207813559	207813559	8553170	3	2521,176,500,	0,3679,8644,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	207873794	207879073	chr1:207873794-207879073	0	-	207873794	207873794	8553170	3	289,80,194,	0,1095,5085,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	207880971	207911402	chr1:207880971-207911402	3	-	207887737	207911080	789624	8	6952,165,53,157,81,254,183,401,	0,7710,8189,8493,16521,18001,18849,30030,
#Partially deleted in new
chr1	207884248	207899134	chr1:207884248-207899134	0	-	207884248	207884248	8553170	6	297,165,53,157,81,162,	0,4433,4912,5216,13244,14724,
#Partially deleted in new
chr1	207886538	207911402	chr1:207886538-207911402	1	-	207888103	207911080	789624	8	1580,165,53,157,81,254,183,401,	0,2143,2622,2926,10954,12434,13282,24463,
#Deleted in new
chr1	207886538	207890492	chr1:207886538-207890492	1	-	207887737	207889837	789624	5	1385,165,53,157,778,	0,2143,2622,2926,3176,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	207909991	207917088	chr1:207909991-207917088	3	+	207909991	207909991	8553170	4	187,184,78,1501,	0,663,4084,5596,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	207959291	207969329	chr1:207959291-207969329	3	+	207959291	207959291	8553170	5	548,68,2643,479,3702,	0,823,2029,5234,6336,
#Partially deleted in new
chr1	208022241	208244320	chr1:208022241-208244320	3	-	208027242	208217922	0	32	5097,151,213,170,191,100,104,160,147,67,269,143,235,144,240,94,168,137,118,152,191,97,201,115,97,154,124,101,135,183,1268,678,	0,5767,6588,9348,11077,12251,16129,16583,17379,17750,19856,20819,22266,22825,23636,28767,29014,30085,32179,38444,57018,60170,62138,70544,73787,74488,76604,80905,120087,188038,194493,221401,
#Partially deleted in new
chr1	208026103	208030303	chr1:208026103-208030303	0	-	208026103	208026103	8553170	3	1235,151,1474,	0,1905,2726,
#Deleted in new
chr1	208031041	208031653	chr1:208031041-208031653	0	-	208031041	208031041	8553170	2	297,64,	0,548,
#Deleted in new
chr1	208038906	208040264	chr1:208038906-208040264	0	-	208038906	208038906	8553170	3	78,147,273,	0,714,1085,
#Partially deleted in new
chr1	208209986	208217014	chr1:208209986-208217014	0	-	208209986	208209986	8553170	2	476,280,	0,6748,
#Partially deleted in new
chr1	208230190	208244301	chr1:208230190-208244301	0	-	208230190	208230190	8553170	2	280,659,	0,13452,
#Deleted in new
chr1	208255289	208255376	chr1:208255289-208255376	7	-	208255289	208255289	16724991	1	87,	0,
#Partially deleted in new
chr1	208607099	208612192	chr1:208607099-208612192	3	-	208607099	208607099	8553170	2	176,103,	0,4990,
#Partially deleted in new
chr1	208626740	208628085	chr1:208626740-208628085	3	-	208626740	208626740	8553170	2	173,112,	0,1233,
#Partially deleted in new
chr1	208697368	208697698	chr1:208697368-208697698	7	-	208697368	208697368	16724991	1	330,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	208728687	208733184	chr1:208728687-208733184	3	+	208728687	208728687	789624	4	47,135,258,87,	0,455,1130,4410,
#Partially deleted in new
chr1	208972453	208975307	chr1:208972453-208975307	3	+	208972453	208972453	789624	2	323,272,	0,2582,
#Deleted in new
chr1	209001337	209001476	chr1:209001337-209001476	7	+	209001337	209001337	16724991	1	139,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	209147266	209155101	chr1:209147266-209155101	3	-	209147266	209147266	8553170	3	328,101,44,	0,4138,7791,
#Partially deleted in new
chr1	209173013	209173375	chr1:209173013-209173375	7	+	209173013	209173013	16724991	1	362,	0,
#Deleted in new
chr1	209232195	209233419	chr1:209232195-209233419	7	+	209232195	209232195	16724991	1	1224,	0,
#Deleted in new
chr1	209267797	209268223	chr1:209267797-209268223	7	-	209267797	209267797	16724991	1	426,	0,
#Deleted in new
chr1	209325455	209328532	chr1:209325455-209328532	3	+	209325455	209325455	789624	3	125,125,242,	0,1892,2835,
#Partially deleted in new
chr1	209367661	209379690	chr1:209367661-209379690	3	+	209367661	209367661	8553170	5	123,124,55,161,264,	0,227,753,5732,11765,
#Partially deleted in new
chr1	209372054	209373559	chr1:209372054-209373559	0	+	209372054	209372054	8553170	2	160,166,	0,1339,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	209428819	209432537	chr1:209428819-209432537	3	+	209428819	209428819	8553170	5	269,228,76,83,334,	0,361,1605,2923,3384,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	209428819	209432545	chr1:209428819-209432545	0	+	209428819	209428819	8553170	2	3006,342,	0,3384,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	209428836	209432384	chr1:209428836-209432384	1	+	209428836	209428836	8553170	3	46,228,181,	0,344,3367,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	209428837	209432549	chr1:209428837-209432549	1	+	209428837	209428837	8553170	4	251,228,83,346,	0,343,2905,3366,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	209428859	209432407	chr1:209428859-209432407	0	+	209428859	209428859	8553170	4	549,52,83,204,	0,1565,2883,3344,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	209429010	209432549	chr1:209429010-209432549	1	+	209429010	209429010	8553170	4	78,228,52,346,	0,170,1414,3193,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	209429082	209430621	chr1:209429082-209430621	0	+	209429082	209429082	8553170	2	326,197,	0,1342,
#Deleted in new
chr1	209429303	209432838	chr1:209429303-209432838	1	+	209429303	209429303	8553170	4	105,52,83,166,	0,1121,2439,3369,
#Deleted in new
chr1	209429511	209431286	chr1:209429511-209431286	0	+	209429511	209429511	8553170	2	109,862,	0,913,
#Deleted in new
chr1	209429562	209432549	chr1:209429562-209432549	1	+	209429562	209429562	8553170	4	58,52,83,346,	0,862,2180,2641,
#Deleted in new
chr1	209432132	209432242	chr1:209432132-209432242	3	+	209432132	209432132	5263520	1	110,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	209528454	209567673	chr1:209528454-209567673	3	-	209528454	209528454	8553170	7	225,128,91,122,83,76,138,	0,2792,12243,12853,17602,38457,39081,
#Partially deleted in new
chr1	209528540	209547580	chr1:209528540-209547580	0	-	209528540	209528540	8553170	6	139,91,122,73,127,89,	0,12157,12767,14305,17472,18951,
#Partially deleted in new
chr1	209583716	209613938	chr1:209583716-209613938	3	+	209594983	209612875	0	13	216,121,129,75,139,124,76,113,79,88,425,128,899,	0,11238,16266,19497,21819,22603,24141,25263,26134,27748,28075,29068,29323,
#Partially deleted in new
chr1	209583728	209613938	chr1:209583728-209613938	1	+	209594983	209612875	0	13	44,121,129,75,139,124,76,113,79,88,425,128,899,	0,11226,16254,19485,21807,22591,24129,25251,26122,27736,28063,29056,29311,
#Partially deleted in new
chr1	209583728	209609913	chr1:209583728-209609913	0	+	209594983	209609913	789624	8	44,121,129,75,139,124,113,63,	0,11226,16254,19485,21807,22591,25251,26122,
#Partially deleted in new
chr1	209607793	209611944	chr1:209607793-209611944	0	+	209607793	209607793	8553170	5	140,113,79,88,153,	0,1186,2057,3671,3998,
#Partially deleted in new
chr1	209614869	209652466	chr1:209614869-209652466	3	-	209615270	209650944	789624	23	538,154,177,142,208,145,198,221,161,379,112,197,156,189,121,194,64,192,74,115,155,65,98,	0,1601,2540,3037,3582,7666,8112,8635,8970,10778,11997,12513,13165,14867,15745,17713,18200,19577,23038,23664,35094,36047,37499,
#Partially deleted in new
chr1	209614874	209651334	chr1:209614874-209651334	1	-	209615270	209650944	789624	22	533,154,177,142,208,145,198,221,161,379,112,197,156,189,121,194,64,192,74,115,155,418,	0,1596,2535,3032,3577,7661,8107,8630,8965,10773,11992,12508,13160,14862,15740,17708,18195,19572,23033,23659,35089,36042,
#Partially deleted in new
chr1	209614976	209652329	chr1:209614976-209652329	1	-	209615270	209650944	789624	23	431,154,177,142,208,145,198,221,161,379,112,197,156,189,121,194,64,192,74,115,155,65,81,	0,1494,2433,2930,3475,7559,8005,8528,8863,10671,11890,12406,13058,14760,15638,17606,18093,19470,22931,23557,34987,35940,37272,
#Deleted in new
chr1	209616580	209618798	chr1:209616580-209618798	0	-	209616580	209618567	789624	4	44,177,142,347,	0,829,1326,1871,
#Deleted in new
chr1	209623443	209623510	chr1:209623443-209623510	3	-	209623443	209623443	5263520	1	67,	0,
#Partially deleted in new
chr1	209634446	209651394	chr1:209634446-209651394	0	-	209634446	209650944	789624	6	192,74,115,155,65,307,	0,3461,4087,15517,16470,16641,
#Partially deleted in new
chr1	209661363	209675247	chr1:209661363-209675247	0	-	209661363	209661363	789624	3	204,151,26,	0,1547,13858,
#Partially deleted in new
chr1	209661365	209724125	chr1:209661365-209724125	3	-	209661365	209661365	789624	3	202,151,96,	0,1545,62664,
#Deleted in new
chr1	209675419	209676388	chr1:209675419-209676388	3	+	209675684	209675996	789624	2	130,736,	0,233,
#Partially deleted in new
chr1	209686177	209732465	chr1:209686177-209732465	0	+	209704942	209732465	789624	6	108,114,131,112,186,30,	0,18739,19633,20531,20765,46258,
#Partially deleted in new
chr1	209686179	209734949	chr1:209686179-209734949	3	+	209704942	209734521	0	7	106,136,131,112,186,144,646,	0,18715,19631,20529,20763,46256,48124,
#Partially deleted in new
chr1	209686268	209734478	chr1:209686268-209734478	0	+	209704942	209734478	789624	7	17,136,131,112,186,144,175,	0,18626,19542,20440,20674,46167,48035,
#Partially deleted in new
chr1	209704845	209734950	chr1:209704845-209734950	1	+	209704942	209734521	0	6	185,131,112,186,144,647,	0,965,1863,2097,27590,29458,
#Deleted in new
chr1	209744372	209745214	chr1:209744372-209745214	7	+	209744372	209744372	16724991	1	842,	0,
#Partially deleted in new
chr1	209756031	209779655	chr1:209756031-209779655	1	+	209760039	209779453	789624	14	278,101,343,148,58,25,30,96,72,141,138,136,63,225,	0,3002,3950,6483,6781,7036,7331,7460,16916,19317,19567,21320,22079,23399,
#Partially deleted in new
chr1	209756048	209782315	chr1:209756048-209782315	3	+	209760039	209782148	789624	17	261,101,403,148,58,25,30,96,72,141,138,136,63,60,137,114,260,	0,2985,3933,6466,6764,7019,7314,7443,16899,19300,19550,21303,22062,23266,24421,25296,26007,
#Partially deleted in new
chr1	209756065	209779655	chr1:209756065-209779655	0	+	209760039	209778119	789624	13	244,101,403,148,58,25,30,96,72,141,138,63,341,	0,2968,3916,6449,6747,7002,7297,7426,16882,19283,19533,22045,23249,
#Partially deleted in new
chr1	209756135	209762596	chr1:209756135-209762596	0	+	209756135	209756135	8553170	4	174,101,213,82,	0,2898,4036,6379,
#Partially deleted in new
chr1	209756135	209760117	chr1:209756135-209760117	0	+	209760039	209760117	789624	4	174,129,101,136,	0,2590,2898,3846,
#Partially deleted in new
chr1	209756178	209782320	chr1:209756178-209782320	1	+	209760039	209782148	789624	17	131,101,343,148,58,25,30,96,72,141,138,136,63,60,137,114,265,	0,2855,3803,6336,6634,6889,7184,7313,16769,19170,19420,21173,21932,23136,24291,25166,25877,
#Partially deleted in new
chr1	209758497	209782307	chr1:209758497-209782307	1	+	209760039	209782148	789624	17	357,101,403,148,58,25,30,96,72,141,138,136,63,60,137,114,252,	0,536,1484,4017,4315,4570,4865,4994,14450,16851,17101,18854,19613,20817,21972,22847,23558,
#Partially deleted in new
chr1	209768487	209779656	chr1:209768487-209779656	1	+	209775366	209779403	789624	7	173,72,141,138,136,63,342,	0,4460,6861,7111,8864,9623,10827,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	209768594	209779653	chr1:209768594-209779653	0	+	209768594	209768594	8553170	4	66,72,2825,339,	0,4353,6754,10720,
#Partially deleted in new
chr1	209768604	209777421	chr1:209768604-209777421	0	+	209768604	209768604	8553170	4	56,72,388,70,	0,4343,6744,8747,
#Partially deleted in new
chr1	209768604	209777384	chr1:209768604-209777384	0	+	209775366	209777384	789624	5	56,72,200,138,33,	0,4343,6685,6994,8747,
#Partially deleted in new
chr1	209768614	209782313	chr1:209768614-209782313	1	+	209775366	209782129	789624	6	46,72,141,138,136,258,	0,4333,6734,6984,8737,13441,
#Partially deleted in new
chr1	209775807	209779364	chr1:209775807-209779364	0	+	209775807	209775807	8553170	4	317,136,63,50,	0,1544,2303,3507,
#Partially deleted in new
chr1	209777438	209782320	chr1:209777438-209782320	0	+	209777438	209781382	789624	5	49,63,60,114,265,	0,672,1876,3906,4617,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	209778366	209782307	chr1:209778366-209782307	0	+	209778366	209778366	8553170	3	2240,109,252,	0,2983,3689,
#Deleted in new
chr1	209779207	209784559	chr1:209779207-209784559	3	-	209782824	209783634	789624	2	4502,182,	0,5170,
#Deleted in new
chr1	209780838	209782183	chr1:209780838-209782183	0	+	209780838	209780838	8553170	2	620,128,	0,1217,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	209785622	209806175	chr1:209785622-209806175	1	-	209788419	209796441	789624	7	3022,119,393,159,129,205,229,	0,4044,4872,6646,9667,10725,20324,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	209785690	209806044	chr1:209785690-209806044	3	-	209788419	209801413	789624	9	2954,119,393,159,129,205,177,72,98,	0,3976,4804,6578,9599,10657,15549,16281,20256,
#Partially deleted in new
chr1	209788249	209802041	chr1:209788249-209802041	0	-	209793151	209801413	789624	9	395,119,393,159,50,129,205,177,70,	0,1417,2245,4019,4884,7040,8098,12990,13722,
#Partially deleted in new
chr1	209790725	209802166	chr1:209790725-209802166	0	-	209790725	209801413	789624	6	162,159,129,205,177,195,	0,1543,4564,5622,10514,11246,
#Partially deleted in new
chr1	209790737	209792714	chr1:209790737-209792714	0	-	209790737	209790737	8553170	2	150,446,	0,1531,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	209828006	209857565	chr1:209828006-209857565	3	+	209828063	209851447	789624	12	164,40,241,174,89,411,220,203,183,113,246,6362,	0,2101,2796,5178,7068,8794,10902,12846,14258,14576,15444,23197,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	209838804	209844632	chr1:209838804-209844632	0	+	209838804	209842483	789624	3	324,203,2368,	0,2048,3460,
#Partially deleted in new
chr1	209938173	210162223	chr1:209938173-210162223	1	+	209938264	210161042	789624	9	104,48,165,216,272,450,190,57,1495,	0,14535,75459,82865,156148,161838,217547,221247,222555,
#Partially deleted in new
chr1	209938173	210164286	chr1:209938173-210164286	1	+	210013685	210161042	789624	9	104,48,205,165,216,272,450,190,3558,	0,14535,14881,75459,82865,156148,161838,217547,222555,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	209938185	210171389	chr1:209938185-210171389	1	+	210016003	210161042	789624	10	92,48,165,1416,216,272,450,190,57,10661,	0,14523,75447,77498,82853,156136,161826,217535,221235,222543,
#Partially deleted in new
chr1	209938250	210162326	chr1:209938250-210162326	3	+	209938264	210161042	789624	8	27,48,165,216,272,450,190,1598,	0,14458,75382,82788,156071,161761,217470,222478,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	209938250	210161042	chr1:209938250-210161042	1	+	209938250	210161042	789624	10	27,48,121,165,216,272,450,190,57,314,	0,14458,27642,75382,82788,156071,161761,217470,221170,222478,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	209938250	210161731	chr1:209938250-210161731	0	+	209938264	210013711	789624	10	27,48,121,165,216,272,450,190,57,1003,	0,14458,27642,75382,82788,156071,161761,217470,221170,222478,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	209938259	210171315	chr1:209938259-210171315	0	+	210013685	210155739	789624	9	18,48,205,165,216,272,179,190,10587,	0,14449,14795,75373,82779,156062,161752,217461,222469,
#Partially deleted in new
chr1	209952723	210164291	chr1:209952723-210164291	1	+	210013685	210161042	789624	8	33,205,165,216,272,450,190,3563,	0,331,60909,68315,141598,147288,202997,208005,
#Partially deleted in new
chr1	210021045	210162967	chr1:210021045-210162967	0	+	210021045	210161042	789624	6	209,272,450,190,78,2239,	0,73276,78966,134675,138354,139683,
#Deleted in new
chr1	210231455	210234044	chr1:210231455-210234044	3	-	210231455	210231455	789624	2	316,410,	0,2179,
#Deleted in new
chr1	210231455	210232972	chr1:210231455-210232972	1	-	210231455	210231455	8553170	2	316,275,	0,1242,
#Deleted in new
chr1	210231455	210234047	chr1:210231455-210234047	0	-	210231455	210231455	8553170	2	316,97,	0,2495,
#Partially deleted in new
chr1	210232798	210246255	chr1:210232798-210246255	3	+	210237960	210242337	789624	4	213,192,116,4698,	0,5145,6694,8759,
#Partially deleted in new
chr1	210237281	210242165	chr1:210237281-210242165	0	+	210237281	210237281	8553170	4	187,192,116,608,	0,662,2211,4276,
#Partially deleted in new
chr1	210237942	210246628	chr1:210237942-210246628	0	+	210237942	210237942	8553170	4	193,116,128,57,	0,1550,7857,8629,
#Partially deleted in new
chr1	210237977	210246631	chr1:210237977-210246631	0	+	210237977	210237977	8553170	3	158,160,60,	0,7790,8594,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	210265635	210267241	chr1:210265635-210267241	7	-	210265635	210265635	16724991	2	547,577,	0,1029,
#Deleted in new
chr1	210303683	210304540	chr1:210303683-210304540	7	+	210303683	210303683	16724991	1	857,	0,
#Partially deleted in new
chr1	210328251	210676296	chr1:210328251-210676296	3	+	210348975	210674379	789624	12	133,134,68,114,195,216,172,151,36,202,145,2009,	0,20681,34600,59216,72216,76212,89902,136253,184901,259646,295274,346036,
#Partially deleted in new
chr1	210328251	210676296	chr1:210328251-210676296	1	+	210348975	210674379	789624	10	133,134,68,114,172,151,36,202,145,2009,	0,20681,34600,59216,89902,136253,184901,259646,295274,346036,
#Partially deleted in new
chr1	210328905	210676296	chr1:210328905-210676296	1	+	210348975	210674379	789624	11	199,134,68,114,216,172,151,36,202,145,2009,	0,20027,33946,58562,75558,89248,135599,184247,258992,294620,345382,
#Partially deleted in new
chr1	210328905	210676296	chr1:210328905-210676296	1	+	210329010	210674379	789624	11	199,68,114,195,216,172,151,36,202,145,2009,	0,33946,58562,71562,75558,89248,135599,184247,258992,294620,345382,
#Partially deleted in new
chr1	210328952	210676296	chr1:210328952-210676296	1	+	210348975	210674379	789624	12	152,134,68,114,195,216,172,151,36,202,145,2009,	0,19980,33899,58515,71515,75511,89201,135552,184200,258945,294573,345335,
#Partially deleted in new
chr1	210329299	210676296	chr1:210329299-210676296	1	+	210348975	210674379	789624	12	184,134,68,114,195,216,172,151,36,202,145,2009,	0,19633,33552,58168,71168,75164,88854,135205,183853,258598,294226,344988,
#Partially deleted in new
chr1	210362851	210464655	chr1:210362851-210464655	0	+	210387497	210464655	789624	5	68,114,216,172,151,	0,24616,41612,55302,101653,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	210369714	210590542	chr1:210369714-210590542	1	+	210587961	210588210	789624	4	69,114,36,2645,	0,17753,143438,218183,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	210374153	210374267	chr1:210374153-210374267	3	-	210374153	210374153	8553170	1	114,	0,
#Partially deleted in new
chr1	210439582	210676296	chr1:210439582-210676296	1	+	210464578	210674379	789624	6	171,151,36,202,145,2009,	0,24922,73570,148315,183943,234705,
#Deleted in new
chr1	210462344	210463012	chr1:210462344-210463012	7	-	210462344	210462344	16724991	1	668,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	210676822	211134129	chr1:210676822-211134129	1	-	210677341	211133945	789624	12	558,672,197,253,200,430,393,119,129,107,124,263,	0,6644,98525,120685,127144,242817,342041,405957,413739,426673,430431,457044,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	210676831	211134091	chr1:210676831-211134091	1	-	210677341	211133945	789624	12	549,672,197,253,200,430,474,119,129,107,124,225,	0,6635,98516,120676,127135,242808,341951,405948,413730,426664,430422,457035,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	210676899	211134146	chr1:210676899-211134146	0	-	210683280	211133945	0	12	481,1118,197,253,200,430,393,119,129,107,124,280,	0,6121,98448,120608,127067,242740,341964,405880,413662,426596,430354,456967,
#Partially deleted in new
chr1	210678313	211134180	chr1:210678313-211134180	3	-	210683280	211133945	0	11	5825,197,253,200,430,474,119,129,107,124,314,	0,97034,119194,125653,241326,340469,404466,412248,425182,428940,455553,
#Deleted in new
chr1	210678314	210681932	chr1:210678314-210681932	3	+	210678314	210678314	8553170	1	3618,	0,
#Partially deleted in new
chr1	210678314	211134165	chr1:210678314-211134165	1	-	210683280	211133945	0	11	5824,197,253,200,430,393,119,129,107,124,299,	0,97033,119193,125652,241325,340549,404465,412247,425181,428939,455552,
#Partially deleted in new
chr1	210678327	211134128	chr1:210678327-211134128	0	-	210683280	211133945	0	12	841,1118,197,253,200,430,393,119,129,107,124,262,	0,4693,97020,119180,125639,241312,340536,404452,412234,425168,428926,455539,
#Partially deleted in new
chr1	210678335	211134155	chr1:210678335-211134155	0	-	210683280	211133945	0	12	833,1518,197,253,200,430,393,119,129,107,124,289,	0,4285,97012,119172,125631,241304,340528,404444,412226,425160,428918,455531,
#Deleted in new
chr1	210678417	210683929	chr1:210678417-210683929	0	-	210679006	210683929	789624	2	751,463,	0,5049,
#Partially deleted in new
chr1	210681646	211019228	chr1:210681646-211019228	0	-	210684103	211019228	789624	5	2492,253,200,430,365,	0,115861,122320,237993,337217,
#Partially deleted in new
chr1	210682862	211134095	chr1:210682862-211134095	0	-	210804133	211133945	789624	10	1276,197,253,200,393,119,129,107,124,229,	0,92485,114645,121104,336001,399917,407699,420633,424391,451004,
#Partially deleted in new
chr1	210683280	211133945	chr1:210683280-211133945	1	-	210683280	211133945	789624	7	858,197,253,200,107,124,79,	0,92067,114227,120686,420215,423973,450586,
#Partially deleted in new
chr1	210683280	211133945	chr1:210683280-211133945	1	-	210683280	211133945	789624	5	858,197,107,124,79,	0,92067,420215,423973,450586,
#Partially deleted in new
chr1	210775415	211134148	chr1:210775415-211134148	0	-	210804133	211133945	789624	9	129,253,200,474,119,129,107,124,282,	0,22092,28551,243367,307364,315146,328080,331838,358451,
#Partially deleted in new
chr1	210858124	211134078	chr1:210858124-211134078	1	-	210860997	211133945	789624	7	3070,430,393,119,107,124,212,	0,61515,160739,224655,245371,249129,275742,
#Partially deleted in new
chr1	210858162	211134146	chr1:210858162-211134146	3	-	210861143	211133945	789624	7	3032,393,119,129,107,124,280,	0,160701,224617,232399,245333,249091,275704,
#Deleted in new
chr1	210859176	210862285	chr1:210859176-210862285	7	-	210859176	210859176	16724991	1	3109,	0,
#Partially deleted in new
chr1	210918903	211134148	chr1:210918903-211134148	0	-	210918903	210918903	8553170	7	1166,474,119,129,107,124,282,	0,99879,163876,171658,184592,188350,214963,
#Partially deleted in new
chr1	210919174	211134047	chr1:210919174-211134047	0	-	210919174	210919174	8553170	7	895,393,119,129,107,124,181,	0,99689,163605,171387,184321,188079,214692,
#Partially deleted in new
chr1	210919758	211019190	chr1:210919758-211019190	0	-	210919758	210919758	8553170	2	303,408,	0,99024,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	211063391	211103515	chr1:211063391-211103515	0	-	211063391	211063391	8553170	4	346,119,129,20,	0,19388,27170,40104,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	211082871	211188533	chr1:211082871-211188533	3	-	211082871	211107276	789624	7	27,129,107,124,68,44,37,	0,7690,20624,24382,99285,100186,105625,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	211108444	211175173	chr1:211108444-211175173	0	-	211108444	211108444	8553170	3	182,129,85,	0,63702,66644,
#Deleted in new
chr1	211132587	211133374	chr1:211132587-211133374	3	-	211132587	211132587	8553170	2	439,187,	0,600,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	211167998	211207138	chr1:211167998-211207138	3	-	211167998	211167998	8553170	5	1660,129,68,44,105,	0,4148,14158,15059,39035,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	211172169	211188507	chr1:211172169-211188507	0	-	211172169	211172169	8553170	5	106,165,68,44,11,	0,2919,9987,10888,16327,
#Deleted in new
chr1	211173487	211173849	chr1:211173487-211173849	7	+	211173487	211173487	16724991	1	362,	0,
#Deleted in new
chr1	211207238	211207897	chr1:211207238-211207897	7	+	211207238	211207238	16724991	1	659,	0,
#Partially deleted in new
chr1	211258376	211276335	chr1:211258376-211276335	0	+	211260115	211276335	789624	6	149,148,57,78,53,79,	0,1202,1731,12855,15833,17880,
#Partially deleted in new
chr1	211258407	211278223	chr1:211258407-211278223	0	+	211260115	211278223	789624	6	83,57,78,53,162,107,	0,1700,12824,15802,17849,19709,
#Partially deleted in new
chr1	211259278	211314591	chr1:211259278-211314591	1	+	211259560	211313659	0	11	448,57,78,53,162,125,79,219,78,58,1168,	0,829,11953,14931,16978,18838,19959,29899,36397,44804,54145,
#Partially deleted in new
chr1	211259387	211313298	chr1:211259387-211313298	1	+	211259560	211312994	0	11	339,57,78,53,162,125,79,219,78,58,579,	0,720,11844,14822,16869,18729,19850,29790,36288,44695,53332,
#Partially deleted in new
chr1	211259432	211314019	chr1:211259432-211314019	3	+	211259560	211313768	0	12	294,57,78,53,162,125,79,219,78,58,242,596,	0,675,11799,14777,16824,18684,19805,29745,36243,44650,53287,53991,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	211259552	211271570	chr1:211259552-211271570	0	+	211259552	211259552	8553170	3	174,57,339,	0,555,11679,
#Deleted in new
chr1	211259605	211261202	chr1:211259605-211261202	0	+	211259605	211259605	8553170	3	121,57,274,	0,502,1323,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	211259946	211279276	chr1:211259946-211279276	0	+	211260115	211271535	789624	7	218,78,347,53,162,125,39,	0,11285,11581,14263,16310,18170,19291,
#Partially deleted in new
chr1	211259974	211316385	chr1:211259974-211316385	1	+	211260115	211313768	0	11	190,78,53,162,125,79,219,78,58,242,2962,	0,11257,14235,16282,18142,19263,29203,35701,44108,52745,53449,
#Partially deleted in new
chr1	211279237	211313474	chr1:211279237-211313474	0	+	211279237	211313474	789624	4	79,219,78,51,	0,9940,16438,34186,
#Partially deleted in new
chr1	211289177	211313672	chr1:211289177-211313672	0	+	211289177	211313672	789624	5	219,78,58,116,249,	0,6498,14905,23542,24246,
#Partially deleted in new
chr1	211289331	211312819	chr1:211289331-211312819	0	+	211289331	211312377	789624	5	65,78,58,133,100,	0,6344,14751,23023,23388,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	211301460	211314587	chr1:211301460-211314587	0	+	211301460	211301460	8553170	3	2680,242,1164,	0,11259,11963,
#Partially deleted in new
chr1	211304010	211313025	chr1:211304010-211313025	0	+	211304010	211304010	8553170	3	130,133,306,	0,8344,8709,
#Deleted in new
chr1	211312236	211313839	chr1:211312236-211313839	0	+	211312236	211312236	8553170	3	251,242,416,	0,483,1187,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	211326614	211374940	chr1:211326614-211374940	3	+	211353239	211372702	789624	11	59,219,58,102,165,78,75,93,141,169,2813,	0,26624,27795,29752,33297,34087,34473,38761,42837,44687,45513,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	211326614	211365509	chr1:211326614-211365509	0	+	211326614	211326614	8553170	6	59,219,58,4413,75,134,	0,26624,27795,29752,34473,38761,
#Partially deleted in new
chr1	211326697	211361148	chr1:211326697-211361148	0	+	211326697	211326697	8553170	7	192,219,58,102,195,78,61,	0,26541,27712,29669,33184,34004,34390,
#Partially deleted in new
chr1	211326832	211353618	chr1:211326832-211353618	0	+	211326832	211326832	8553170	2	57,380,	0,26406,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	211326836	211374946	chr1:211326836-211374946	1	+	211353239	211372702	789624	11	53,219,58,102,165,78,75,93,141,169,2819,	0,26402,27573,29530,33075,33865,34251,38539,42615,44465,45291,
#Partially deleted in new
chr1	211346363	211372795	chr1:211346363-211372795	1	+	211353239	211372702	789624	11	59,219,58,102,165,78,75,93,141,169,668,	0,6875,8046,10003,13548,14338,14724,19012,23088,24938,25764,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	211368928	211374785	chr1:211368928-211374785	0	+	211368928	211368928	8553170	3	664,169,2658,	0,2373,3199,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	211382802	211435333	chr1:211382802-211435333	3	+	211382802	211382802	789624	6	123,82,150,65,73,3015,	0,8813,9024,13964,43408,49516,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	211382819	211398638	chr1:211382819-211398638	0	+	211382819	211382819	8553170	5	106,82,150,65,603,	0,8796,9007,13947,15216,
#Partially deleted in new
chr1	211382836	211391976	chr1:211382836-211391976	0	+	211382836	211382836	8553170	4	139,107,82,150,	0,7727,8779,8990,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	211399257	211432534	chr1:211399257-211432534	0	+	211399257	211399257	8553170	3	180,73,216,	0,26953,33061,
#Deleted in new
chr1	211417024	211417934	chr1:211417024-211417934	7	+	211417024	211417024	16724991	2	596,238,	0,672,
#Deleted in new
chr1	211442273	211442806	chr1:211442273-211442806	7	+	211442273	211442273	16724991	1	533,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	211476521	211492917	chr1:211476521-211492917	3	-	211479035	211481415	789624	3	2806,310,1150,	0,4598,15246,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	211476521	211492031	chr1:211476521-211492031	0	-	211476521	211476521	8553170	2	2806,264,	0,15246,
#Deleted in new
chr1	211492254	211492917	chr1:211492254-211492917	3	+	211492254	211492254	8553170	2	169,322,	0,341,
#Deleted in new
chr1	211571567	211578742	chr1:211571567-211578742	3	-	211575387	211578612	789624	2	4722,752,	0,6423,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	211583014	211583725	chr1:211583014-211583725	3	-	211583014	211583014	8553170	1	711,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	211635905	211642867	chr1:211635905-211642867	3	-	211635905	211635905	8553170	2	540,45,	0,6917,
#Partially deleted in new
chr1	211639694	211654581	chr1:211639694-211654581	0	+	211639694	211639694	8553170	2	666,538,	0,14349,
#Partially deleted in new
chr1	211639807	211654176	chr1:211639807-211654176	3	+	211639807	211639807	789624	3	82,142,133,	0,411,14236,
#Partially deleted in new
chr1	211658656	211675630	chr1:211658656-211675630	1	-	211658656	211675479	789624	8	56,126,220,127,83,241,218,247,	0,8449,10456,11624,12545,14826,15639,16727,
#Partially deleted in new
chr1	211660188	211661277	chr1:211660188-211661277	7	-	211660188	211660188	16724991	1	1089,	0,
#Partially deleted in new
chr1	211662771	211675618	chr1:211662771-211675618	3	-	211663425	211675479	0	8	881,126,220,127,83,241,218,235,	0,4334,6341,7509,8430,10711,11524,12612,
#Partially deleted in new
chr1	211663402	211671284	chr1:211663402-211671284	0	-	211663402	211663402	8553170	5	226,126,220,113,116,	0,3703,5710,6878,7766,
#Partially deleted in new
chr1	211663524	211669519	chr1:211663524-211669519	0	-	211663524	211663524	8553170	3	128,126,407,	0,3581,5588,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	211666429	211675557	chr1:211666429-211675557	1	-	211667061	211675479	0	7	802,220,127,83,241,218,174,	0,2683,3851,4772,7053,7866,8954,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	211675761	211686790	chr1:211675761-211686790	0	+	211675761	211675761	8553170	4	105,88,241,321,	0,1305,9804,10708,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	211681763	211687459	chr1:211681763-211687459	3	+	211681763	211681763	8553170	6	101,75,154,299,227,990,	0,1786,2084,2890,3802,4706,
#Partially deleted in new
chr1	211715927	211725402	chr1:211715927-211725402	3	-	211715927	211715927	8553170	2	73,101,	0,9374,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	211743456	211830772	chr1:211743456-211830772	3	-	211749898	211829296	789624	8	6594,107,127,274,96,119,265,200,	0,7504,35461,39772,44175,49615,85602,87116,
#Partially deleted in new
chr1	211749792	211830238	chr1:211749792-211830238	1	-	211749898	211829296	789624	8	258,107,127,274,96,119,265,789,	0,1168,29125,33436,37839,43279,79266,79657,
#Partially deleted in new
chr1	211778999	211793326	chr1:211778999-211793326	0	-	211778999	211778999	8553170	2	45,255,	0,14072,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	211792110	211792406	chr1:211792110-211792406	3	-	211792110	211792110	8553170	1	296,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	211803016	211803104	chr1:211803016-211803104	3	+	211803016	211803016	8553170	1	88,	0,
#Deleted in new
chr1	211829178	211830722	chr1:211829178-211830722	0	-	211829178	211829178	8553170	3	141,148,150,	0,1004,1394,
#Partially deleted in new
chr1	211830960	211853643	chr1:211830960-211853643	3	+	211830960	211830960	789624	6	80,157,70,86,70,82,	0,295,8503,20560,20742,22601,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	211831346	211839933	chr1:211831346-211839933	0	+	211831346	211831346	8553170	3	66,70,275,	0,8117,8312,
#Partially deleted in new
chr1	211831347	211853703	chr1:211831347-211853703	0	+	211831347	211831347	8553170	5	65,70,86,70,142,	0,8116,20173,20355,22214,
#Deleted in new
chr1	211936248	211936634	chr1:211936248-211936634	7	+	211936248	211936248	16724991	1	386,	0,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr1	211940398	212035536	chr1:211940398-212035536	0	-	212020262	212035437	789624	21	1713,186,99,133,69,104,195,207,138,240,98,135,118,123,200,47,138,147,34,130,193,	0,4385,6208,12170,26031,27479,28114,34767,36183,37873,40694,42277,47487,66240,66851,70976,76487,79723,80322,80684,94945,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	211940400	212035542	chr1:211940400-212035542	3	-	211941823	212035437	789624	20	1711,186,99,133,69,104,195,207,138,240,98,135,118,123,200,47,138,147,130,199,	0,4383,6206,12168,26029,27477,28112,34765,36181,37871,40692,42275,47485,66238,66849,70974,76485,79721,80682,94943,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	211941347	212035536	chr1:211941347-212035536	1	-	211941823	212035437	789624	20	764,186,99,91,69,104,195,207,138,240,98,135,118,123,200,47,138,147,130,193,	0,3436,5259,11263,25082,26530,27165,33818,35234,36924,39745,41328,46538,65291,65902,70027,75538,78774,79735,93996,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	211941355	212035520	chr1:211941355-212035520	1	-	211941823	212035437	789624	20	756,186,39,133,69,104,195,207,138,240,98,135,118,123,200,47,138,147,130,177,	0,3428,5251,11213,25074,26522,27157,33810,35226,36916,39737,41320,46530,65283,65894,70019,75530,78766,79727,93988,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	211941531	212035539	chr1:211941531-212035539	1	-	211941823	212035437	789624	19	580,186,99,133,69,104,195,207,138,240,98,135,118,123,200,47,138,130,196,	0,3252,5075,11037,24898,26346,26981,33634,35050,36740,39561,41144,46354,65107,65718,69843,75354,79551,93812,
#Partially deleted in new
chr1	211941722	211966467	chr1:211941722-211966467	0	-	211941823	211966467	789624	3	389,133,38,	0,10846,24707,
#Partially deleted in new
chr1	211944954	211976658	chr1:211944954-211976658	0	-	211968543	211976658	789624	8	15,99,133,69,104,91,207,77,	0,1652,7614,21475,22923,23558,30211,31627,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	211952426	211975342	chr1:211952426-211975342	0	-	211952426	211952426	8553170	5	275,69,104,195,177,	0,14003,15451,16086,22739,
#Partially deleted in new
chr1	211966123	211968707	chr1:211966123-211968707	0	-	211966123	211966123	8553170	3	375,104,195,	0,1754,2389,
#Partially deleted in new
chr1	212006664	212011627	chr1:212006664-212011627	0	-	212006664	212006664	8553170	3	97,200,253,	0,585,4710,
#Partially deleted in new
chr1	212020218	212035530	chr1:212020218-212035530	0	-	212030905	212035437	789624	4	50,130,204,187,	0,864,10518,15125,
#Deleted in new
chr1	212025560	212025682	chr1:212025560-212025682	3	+	212025560	212025560	8553170	1	122,	0,
#Partially deleted in new
chr1	212035552	212105006	chr1:212035552-212105006	1	+	212035890	212102940	789624	14	390,99,62,121,66,113,74,104,105,113,90,136,833,2165,	0,9107,11598,11744,27331,29364,31259,32671,33046,36548,42620,45062,64699,67289,
#Partially deleted in new
chr1	212035576	212105006	chr1:212035576-212105006	3	+	212035890	212102940	789624	15	366,126,99,62,121,66,113,74,104,105,113,90,136,833,2165,	0,7416,9083,11574,11720,27307,29340,31235,32647,33022,36524,42596,45038,64675,67265,
#Partially deleted in new
chr1	212035845	212104594	chr1:212035845-212104594	0	+	212035845	212035845	8553170	13	97,99,62,121,66,113,74,105,113,90,136,833,1753,	0,8814,11305,11451,27038,29071,30966,32753,36255,42327,44769,64406,66996,
#Deleted in new
chr1	212051523	212052006	chr1:212051523-212052006	7	-	212051523	212051523	16724991	1	483,	0,
#Partially deleted in new
chr1	212072073	212100700	chr1:212072073-212100700	0	+	212072073	212072073	8553170	4	140,90,136,449,	0,6099,8541,28178,
#Deleted in new
chr1	212077612	212077685	chr1:212077612-212077685	3	+	212077612	212077612	5263520	1	73,	0,
#Partially deleted in new
chr1	212080368	212100426	chr1:212080368-212100426	0	+	212080368	212080368	8553170	2	382,175,	0,19883,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	212099520	212099676	chr1:212099520-212099676	3	-	212099520	212099520	8553170	1	156,	0,
#Partially deleted in new
chr1	212100645	212107400	chr1:212100645-212107400	0	+	212100645	212100645	8553170	2	439,46,	0,6709,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	212168206	212190259	chr1:212168206-212190259	3	+	212168206	212168206	8553170	4	59,122,110,219,	0,387,1979,21834,
#Partially deleted in new
chr1	212225277	212234546	chr1:212225277-212234546	0	-	212225277	212225277	789624	3	236,57,44,	0,4925,9225,
#Deleted in new
chr1	212225279	212226538	chr1:212225279-212226538	0	-	212225279	212225279	8553170	2	234,103,	0,1156,
#Partially deleted in new
chr1	212225279	212238977	chr1:212225279-212238977	3	-	212225279	212225279	789624	3	234,57,71,	0,4923,13627,
#Partially deleted in new
chr1	212285536	212361863	chr1:212285536-212361863	3	+	212286110	212360770	789624	13	755,197,102,93,131,60,109,54,51,120,128,102,1226,	0,43598,47960,56651,60266,61810,62852,63652,71089,71413,71620,73149,75101,
#Partially deleted in new
chr1	212297447	212299579	chr1:212297447-212299579	3	+	212297447	212297447	8553170	2	354,296,	0,1836,
#Partially deleted in new
chr1	212299494	212331713	chr1:212299494-212331713	3	-	212299494	212299494	8553170	2	131,256,	0,31963,
#Partially deleted in new
chr1	212301805	212360922	chr1:212301805-212360922	1	+	212302082	212360770	789624	13	287,197,102,93,131,60,109,54,51,120,128,102,285,	0,27329,31691,40382,43997,45541,46583,47383,54820,55144,55351,56880,58832,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	212301862	212342280	chr1:212301862-212342280	0	+	212301862	212301862	8553170	5	230,118,197,102,93,	0,4920,27272,31634,40325,
#Partially deleted in new
chr1	212301862	212319545	chr1:212301862-212319545	0	+	212301862	212301862	8553170	2	230,169,	0,17514,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	212301862	212342280	chr1:212301862-212342280	0	+	212301862	212301862	8553170	6	230,50,197,102,73,93,	0,11904,27272,31634,32089,40325,
#Deleted in new
chr1	212309050	212309518	chr1:212309050-212309518	7	-	212309050	212309050	16724991	1	468,	0,
#Deleted in new
chr1	212352815	212352950	chr1:212352815-212352950	3	+	212352815	212352815	789624	1	135,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	212357417	212358353	chr1:212357417-212358353	3	+	212357417	212357417	8553170	2	58,438,	0,498,
#Partially deleted in new
chr1	212363930	212414895	chr1:212363930-212414895	3	-	212365214	212414757	789624	8	1446,108,145,143,152,210,97,174,	0,11262,13631,15964,21343,22960,46494,50791,
#Partially deleted in new
chr1	212364475	212414901	chr1:212364475-212414901	1	-	212365214	212414757	789624	9	901,108,145,143,152,210,97,183,180,	0,10717,13086,15419,20798,22415,45949,49422,50246,
#Partially deleted in new
chr1	212375220	212377706	chr1:212375220-212377706	0	-	212375220	212375220	8553170	3	80,91,145,	0,1573,2341,
#Partially deleted in new
chr1	212375247	212410164	chr1:212375247-212410164	0	-	212375247	212375247	8553170	6	53,145,143,152,210,39,	0,2314,4647,10026,11643,34878,
#Partially deleted in new
chr1	212385273	212414895	chr1:212385273-212414895	0	-	212385273	212385273	8553170	5	152,210,120,97,174,	0,1617,2339,25151,29448,
#Partially deleted in new
chr1	212432886	212446379	chr1:212432886-212446379	3	+	212432943	212446006	789624	4	234,61,104,550,	0,9678,11452,12943,
#Partially deleted in new
chr1	212432922	212446372	chr1:212432922-212446372	0	+	212432922	212432922	789624	3	198,104,543,	0,11416,12907,
#Partially deleted in new
chr1	212432972	212446372	chr1:212432972-212446372	0	+	212432972	212432972	8553170	4	148,80,104,543,	0,9573,11366,12857,
#Partially deleted in new
chr1	212432990	212435033	chr1:212432990-212435033	0	+	212432990	212432990	8553170	2	130,329,	0,1714,
#Deleted in new
chr1	212466815	212467743	chr1:212466815-212467743	3	-	212466815	212466815	8553170	2	282,77,	0,851,
#Partially deleted in new
chr1	212545693	212556065	chr1:212545693-212556065	3	+	212545693	212545693	789624	3	72,37,223,	0,8718,10149,
#Deleted in new
chr1	212557832	212559731	chr1:212557832-212559731	3	-	212557832	212557832	8553170	1	1899,	0,
#Partially deleted in new
chr1	212565333	212619535	chr1:212565333-212619535	0	+	212615021	212619535	789624	4	150,244,108,178,	0,49684,52793,54024,
#Partially deleted in new
chr1	212565333	212620772	chr1:212565333-212620772	3	+	212615021	212619555	789624	4	150,244,108,1415,	0,49684,52793,54024,
#Partially deleted in new
chr1	212608627	212620772	chr1:212608627-212620772	1	+	212615192	212619555	789624	5	303,5,200,108,1415,	0,6390,6434,9499,10730,
#Partially deleted in new
chr1	212608669	212620777	chr1:212608669-212620777	1	+	212615021	212619555	789624	4	261,244,108,1420,	0,6348,9457,10688,
#Partially deleted in new
chr1	212608669	212619247	chr1:212608669-212619247	0	+	212608669	212608669	8553170	3	261,244,1121,	0,6348,9457,
#Partially deleted in new
chr1	212608914	212619611	chr1:212608914-212619611	0	+	212608914	212619555	789624	5	16,28,110,108,254,	0,6103,6237,9212,10443,
#Partially deleted in new
chr1	212613435	212620777	chr1:212613435-212620777	0	+	212613435	212613435	8553170	2	692,1411,	0,5931,
#Partially deleted in new
chr1	212615021	212619266	chr1:212615021-212619266	1	+	212615021	212619105	789624	4	39,114,108,221,	0,126,3105,4024,
#Partially deleted in new
chr1	212615021	212619555	chr1:212615021-212619555	1	+	212615021	212619105	789624	3	240,108,510,	0,3105,4024,
#Partially deleted in new
chr1	212615021	212619555	chr1:212615021-212619555	0	+	212615021	212619105	789624	4	240,108,221,198,	0,3105,4024,4336,
#Partially deleted in new
chr1	212615177	212619746	chr1:212615177-212619746	1	+	212615192	212619555	789624	3	84,108,389,	0,2949,4180,
#Deleted in new
chr1	212624283	212626771	chr1:212624283-212626771	3	-	212624283	212624283	8553170	2	687,1538,	0,950,
#Deleted in new
chr1	212624473	212626778	chr1:212624473-212626778	3	+	212624877	212626662	789624	1	2305,	0,
#Deleted in new
chr1	212647295	212647755	chr1:212647295-212647755	7	+	212647295	212647295	16724991	1	460,	0,
#Partially deleted in new
chr1	212653998	212665434	chr1:212653998-212665434	3	-	212653998	212653998	8553170	3	273,101,99,	0,10588,11337,
#Partially deleted in new
chr1	212686417	212699985	chr1:212686417-212699985	3	-	212686790	212699762	789624	3	562,105,313,	0,10543,13255,
#Deleted in new
chr1	212686417	212687509	chr1:212686417-212687509	0	-	212686417	212686417	8553170	2	562,43,	0,1049,
#Partially deleted in new
chr1	212686417	212698755	chr1:212686417-212698755	0	-	212686417	212686417	8553170	2	562,1795,	0,10543,
#Partially deleted in new
chr1	212726152	212791581	chr1:212726152-212791581	1	-	212727141	212787562	789624	5	1027,55,131,79,52,	0,56219,58210,61406,65377,
#Partially deleted in new
chr1	212736955	212791782	chr1:212736955-212791782	3	-	212738407	212791763	0	6	1731,68,55,131,79,253,	0,2578,45416,47407,50603,54574,
#Partially deleted in new
chr1	212738482	212791782	chr1:212738482-212791782	1	-	212738666	212791763	789624	5	204,55,131,79,253,	0,43889,45880,49076,53047,
#Partially deleted in new
chr1	212781931	212791615	chr1:212781931-212791615	0	-	212781931	212781931	8553170	4	495,131,79,86,	0,2431,5627,9598,
#Partially deleted in new
chr1	212784140	212791782	chr1:212784140-212791782	0	-	212784140	212784140	8553170	3	353,79,253,	0,3418,7389,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	212791827	212816626	chr1:212791827-212816626	3	+	212791921	212815156	0	10	160,33,74,85,63,110,56,113,81,1614,	0,3267,4689,5284,10873,12492,12768,15908,20420,23185,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	212791827	212815597	chr1:212791827-212815597	1	+	212791921	212815156	0	10	160,33,74,85,63,110,56,113,102,585,	0,3267,4689,5284,10873,12492,12768,15908,20399,23185,
#Partially deleted in new
chr1	212791850	212804504	chr1:212791850-212804504	1	+	212791921	212802713	789624	5	137,33,74,63,185,	0,3244,4666,10850,12469,
#Partially deleted in new
chr1	212791869	212815415	chr1:212791869-212815415	1	+	212791921	212815156	0	9	118,33,74,85,110,56,113,81,403,	0,3225,4647,5242,12450,12726,15866,20378,23143,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	212791883	212816617	chr1:212791883-212816617	1	+	212791921	212815156	0	10	104,33,74,85,63,110,56,113,78,1605,	0,3211,4633,5228,10817,12436,12712,15852,20367,23129,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	212791883	212815597	chr1:212791883-212815597	1	+	212791921	212815067	0	10	104,33,74,85,63,110,56,113,102,551,	0,3211,4633,5228,10817,12436,12712,15852,20343,23163,
#Partially deleted in new
chr1	212791905	212815225	chr1:212791905-212815225	1	+	212791921	212815023	789624	9	82,33,74,85,63,110,56,78,213,	0,3189,4611,5206,10795,12414,12690,20345,23107,
#Partially deleted in new
chr1	212791910	212812282	chr1:212791910-212812282	0	+	212791921	212807783	789624	6	77,33,74,85,113,35,	0,3184,4606,5201,15825,20337,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	212791920	212796977	chr1:212791920-212796977	0	+	212791920	212791920	8553170	3	67,33,461,	0,3174,4596,
#Partially deleted in new
chr1	212791923	212804498	chr1:212791923-212804498	0	+	212791923	212804433	789624	6	64,33,74,85,63,179,	0,3171,4593,5188,10777,12396,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	212791925	212816626	chr1:212791925-212816626	0	+	212791925	212802713	789624	9	62,33,74,63,110,56,113,81,1614,	0,3169,4591,10775,12394,12670,15810,20322,23087,
#Partially deleted in new
chr1	212792922	212802751	chr1:212792922-212802751	0	+	212792922	212792922	8553170	5	59,33,74,85,51,	0,2172,3594,4189,9778,
#Partially deleted in new
chr1	212794682	212804651	chr1:212794682-212804651	0	+	212794745	212804651	789624	7	126,33,74,85,63,110,56,	0,412,1834,2429,8018,9637,9913,
#Partially deleted in new
chr1	212794869	212815175	chr1:212794869-212815175	0	+	212794869	212794869	8553170	9	258,74,85,63,110,56,113,78,163,	0,1647,2242,7831,9450,9726,12866,17381,20143,
#Partially deleted in new
chr1	212794984	212804524	chr1:212794984-212804524	0	+	212794984	212794984	8553170	5	143,74,85,63,205,	0,1532,2127,7716,9335,
#Deleted in new
chr1	212797131	212797682	chr1:212797131-212797682	0	+	212797131	212797226	789624	1	551,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	212804618	212815844	chr1:212804618-212815844	0	+	212804618	212815023	789624	3	33,81,832,	0,7629,10394,
#Partially deleted in new
chr1	212824026	212824505	chr1:212824026-212824505	7	+	212824026	212824026	16724991	1	479,	0,
#Partially deleted in new
chr1	212830140	212847649	chr1:212830140-212847649	3	-	212830241	212836149	789624	3	121,315,70,	0,5732,17439,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	212852107	212858088	chr1:212852107-212858088	3	-	212852107	212852107	8553170	2	2202,323,	0,5658,
#Partially deleted in new
chr1	212853279	212853426	chr1:212853279-212853426	7	+	212853279	212853279	16724991	1	147,	0,
#Partially deleted in new
chr1	212855174	212855366	chr1:212855174-212855366	7	-	212855174	212855174	16724991	1	192,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	212856603	212858088	chr1:212856603-212858088	0	-	212856603	212856603	789624	2	315,323,	0,1162,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	212856603	212858088	chr1:212856603-212858088	1	-	212856603	212856603	789624	2	569,323,	0,1162,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	212858254	212899363	chr1:212858254-212899363	3	+	212858452	212895290	789624	10	936,145,141,68,104,111,106,112,68,4148,	0,5470,14423,25116,27038,29636,30234,30891,36731,36961,
#Partially deleted in new
chr1	212858915	212895334	chr1:212858915-212895334	0	+	212858915	212895290	789624	9	275,145,68,104,111,106,112,68,119,	0,4809,24455,26377,28975,29573,30230,36070,36300,
#Partially deleted in new
chr1	212863630	212870166	chr1:212863630-212870166	0	+	212863630	212863630	8553170	3	239,127,113,	0,762,6423,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	212864411	212885565	chr1:212864411-212885565	0	+	212864411	212864411	8553170	4	108,141,68,273,	0,8266,18959,20881,
#Partially deleted in new
chr1	212883408	212895394	chr1:212883408-212895394	0	+	212883408	212883408	8553170	6	30,104,106,112,68,179,	0,1884,5080,5737,11577,11807,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	212916786	212917577	chr1:212916786-212917577	3	+	212916786	212916786	8553170	3	251,85,218,	0,329,573,
#Partially deleted in new
chr1	212950519	212988698	chr1:212950519-212988698	1	+	212951737	212988584	789624	9	221,58,184,89,57,75,382,116,187,	0,819,1115,10646,15202,15751,22060,23435,37992,
#Partially deleted in new
chr1	212950593	212991585	chr1:212950593-212991585	1	+	212951737	212988584	789624	9	147,54,230,89,57,75,382,116,3074,	0,745,995,10572,15128,15677,21986,23361,37918,
#Deleted in new
chr1	212950594	212951812	chr1:212950594-212951812	0	+	212951737	212951812	789624	3	146,211,224,	0,587,994,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	212950617	212969249	chr1:212950617-212969249	1	+	212951542	212967126	789624	6	123,480,89,57,75,2136,	0,721,10548,15104,15653,16496,
#Partially deleted in new
chr1	212950634	212990910	chr1:212950634-212990910	1	+	212951542	212988584	789624	6	106,480,89,382,116,2399,	0,704,10531,21945,23320,37877,
#Partially deleted in new
chr1	212950640	212974927	chr1:212950640-212974927	0	+	212950640	212950640	8553170	6	100,195,75,382,647,331,	0,10525,15630,21939,22783,23956,
#Partially deleted in new
chr1	212950666	212988924	chr1:212950666-212988924	1	+	212961201	212988584	789624	7	74,89,57,75,382,116,413,	0,10499,15055,15604,21913,23288,37845,
#Deleted in new
chr1	212951527	212952791	chr1:212951527-212952791	0	+	212951527	212951527	8553170	2	291,362,	0,902,
#Partially deleted in new
chr1	212951542	212988584	chr1:212951542-212988584	3	+	212951542	212988584	789624	7	276,89,57,75,382,116,73,	0,9623,14179,14728,21037,22412,36969,
#Partially deleted in new
chr1	212961226	212966155	chr1:212961226-212966155	0	+	212961226	212961226	8553170	2	28,434,	0,4495,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	212966956	212972918	chr1:212966956-212972918	0	+	212966956	212966956	8553170	2	140,339,	0,5623,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	212989126	212992037	chr1:212989126-212992037	0	+	212989126	212989126	8553170	2	50,487,	0,2424,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	212992181	213015826	chr1:212992181-213015826	1	-	212995040	213008344	789624	8	3011,164,58,127,422,70,257,214,	0,4973,8144,8604,12851,14947,16028,23431,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	212992181	213015826	chr1:212992181-213015826	3	-	212995040	213015671	789624	9	3011,164,58,127,422,70,257,326,214,	0,4973,8144,8604,12851,14947,16028,20911,23431,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	212993991	213015826	chr1:212993991-213015826	1	-	212995040	213008344	789624	8	1201,164,58,127,422,70,257,218,	0,3163,6334,6794,11041,13137,14218,21617,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	212994728	213002234	chr1:212994728-213002234	0	-	212994728	212994728	8553170	4	464,164,58,1449,	0,2426,5597,6057,
#Partially deleted in new
chr1	212997199	213000570	chr1:212997199-213000570	0	-	212997199	212997199	8553170	2	119,245,	0,3126,
#Partially deleted in new
chr1	213005124	213011463	chr1:213005124-213011463	0	-	213005124	213005124	8553170	4	330,70,257,256,	0,2004,3085,6083,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	213006538	213013418	chr1:213006538-213013418	0	-	213006538	213006538	8553170	3	660,257,326,	0,1671,6554,
#Partially deleted in new
chr1	213008209	213015493	chr1:213008209-213015493	0	-	213008209	213008209	8553170	3	257,326,268,	0,4883,7016,
#Partially deleted in new
chr1	213051232	213273464	chr1:213051232-213273464	1	+	213129597	213272634	789624	14	277,36,116,94,363,116,93,48,133,1596,90,83,96,941,	0,19773,53221,66084,78294,116625,125167,179264,180890,189469,191336,210325,211488,221291,
#Partially deleted in new
chr1	213051232	213273464	chr1:213051232-213273464	1	+	213129597	213272634	789624	15	277,36,117,121,116,94,363,116,48,133,1596,90,83,96,941,	0,19773,21637,26463,53221,66084,78294,116625,179264,180890,189469,191336,210325,211488,221291,
#Partially deleted in new
chr1	213051232	213273464	chr1:213051232-213273464	1	+	213129597	213272634	789624	15	277,36,121,116,94,78,363,116,48,133,1596,90,83,96,941,	0,19773,26463,53221,66084,74533,78294,116625,179264,180890,189469,191336,210325,211488,221291,
#Partially deleted in new
chr1	213051232	213273464	chr1:213051232-213273464	1	+	213240871	213272634	789624	13	277,36,121,116,94,363,116,93,1596,90,83,96,941,	0,19773,26463,53221,66084,78294,116625,125167,189469,191336,210325,211488,221291,
#Partially deleted in new
chr1	213051254	213274773	chr1:213051254-213274773	1	+	213051404	213272634	789624	14	255,121,116,94,363,116,93,48,133,1596,90,83,96,2250,	0,26441,53199,66062,78272,116603,125145,179242,180868,189447,191314,210303,211466,221269,
#Partially deleted in new
chr1	213051254	213274773	chr1:213051254-213274773	3	+	213051404	213272634	789624	15	255,36,121,116,94,363,116,93,48,133,1596,90,83,96,2250,	0,19751,26441,53199,66062,78272,116603,125145,179242,180868,189447,191314,210303,211466,221269,
#Partially deleted in new
chr1	213072937	213274773	chr1:213072937-213274773	0	+	213072937	213072937	8553170	13	49,121,116,363,116,93,48,133,1596,90,83,96,2250,	0,4758,31516,56589,94920,103462,157559,159185,167764,169631,188620,189783,199586,
#Partially deleted in new
chr1	213129526	213176704	chr1:213129526-213176704	0	+	213129526	213129526	8553170	3	363,116,305,	0,38331,46873,
#Partially deleted in new
chr1	213242059	213262816	chr1:213242059-213262816	0	+	213242059	213242059	8553170	3	599,83,96,	0,19498,20661,
#Deleted in new
chr1	213428707	213429077	chr1:213428707-213429077	7	-	213428707	213428707	16724991	1	370,	0,
#Partially deleted in new
chr1	213492300	213546447	chr1:213492300-213546447	3	+	213492300	213492300	8553170	2	275,165,	0,53982,
#Partially deleted in new
chr1	213731415	213794587	chr1:213731415-213794587	3	+	213731415	213731415	8553170	2	143,204,	0,62968,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	213817750	213988382	chr1:213817750-213988382	3	-	213817750	213817750	8553170	6	4683,101,81,125,214,62,	0,14771,76912,77643,148320,170570,
#Partially deleted in new
chr1	213832540	213966835	chr1:213832540-213966835	0	-	213832540	213832540	8553170	6	82,169,81,125,214,118,	0,44097,62122,62853,133530,134177,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	213832540	213937423	chr1:213832540-213937423	0	-	213832540	213832540	8553170	4	108,81,125,170,	0,62122,62853,104713,
#Partially deleted in new
chr1	213832540	213979421	chr1:213832540-213979421	0	-	213832540	213832540	8553170	7	108,60,81,125,108,214,111,	0,7197,62122,62853,88932,133530,146770,
#Partially deleted in new
chr1	213832540	213894748	chr1:213832540-213894748	0	-	213832540	213832540	8553170	6	82,60,93,149,86,86,	0,7197,7967,8140,10942,62122,
#Partially deleted in new
chr1	213832540	213987585	chr1:213832540-213987585	0	-	213832540	213832540	8553170	8	82,60,93,181,81,125,165,113,	0,7197,7967,9519,62122,62853,83394,154932,
#Partially deleted in new
chr1	213832540	213988450	chr1:213832540-213988450	0	-	213832540	213832540	8553170	5	82,86,81,125,130,	0,10942,62122,62853,155780,
#Partially deleted in new
chr1	213832590	213841362	chr1:213832590-213841362	0	-	213832590	213832590	8553170	3	58,60,855,	0,7147,7917,
#Partially deleted in new
chr1	213832590	213841146	chr1:213832590-213841146	0	-	213832590	213832590	8553170	4	32,60,104,639,	0,7147,7502,7917,
#Partially deleted in new
chr1	213832590	213841224	chr1:213832590-213841224	0	-	213832590	213832590	8553170	3	32,60,717,	0,7147,7917,
#Partially deleted in new
chr1	213832590	213841041	chr1:213832590-213841041	0	-	213832590	213832590	8553170	4	32,202,60,534,	0,3262,7147,7917,
#Partially deleted in new
chr1	213832590	213987722	chr1:213832590-213987722	0	-	213832590	213832590	8553170	3	32,214,143,	0,133480,154989,
#Partially deleted in new
chr1	213832590	213981331	chr1:213832590-213981331	0	-	213832590	213832590	8553170	4	32,188,109,36,	0,133480,146720,148705,
#Partially deleted in new
chr1	213832590	213966094	chr1:213832590-213966094	0	-	213832590	213832590	8553170	10	32,60,93,149,86,81,92,44,27,24,	0,7147,7917,8090,10892,62072,62836,83344,83482,133480,
#Partially deleted in new
chr1	213832590	213988440	chr1:213832590-213988440	0	-	213832590	213832590	8553170	7	58,93,81,125,165,188,120,	0,7917,62072,62803,83344,133480,155730,
#Partially deleted in new
chr1	213832590	213988410	chr1:213832590-213988410	0	-	213832590	213832590	8553170	3	32,188,90,	0,133480,155730,
#Partially deleted in new
chr1	213832590	213981328	chr1:213832590-213981328	0	-	213832590	213832590	8553170	7	32,81,125,165,214,109,33,	0,62072,62803,83344,133480,146720,148705,
#Partially deleted in new
chr1	213832590	213986162	chr1:213832590-213986162	0	-	213832590	213832590	8553170	5	32,81,125,188,94,	0,62072,62803,133480,153478,
#Partially deleted in new
chr1	213832590	213988398	chr1:213832590-213988398	0	-	213832590	213832590	8553170	3	32,214,78,	0,133480,155730,
#Partially deleted in new
chr1	213832590	213988398	chr1:213832590-213988398	0	-	213832590	213832590	8553170	6	32,81,125,165,214,78,	0,62072,62803,83344,133480,155730,
#Partially deleted in new
chr1	213832590	213986162	chr1:213832590-213986162	0	-	213832590	213832590	8553170	3	32,188,94,	0,133480,153478,
#Partially deleted in new
chr1	213832590	213986156	chr1:213832590-213986156	0	-	213832590	213832590	8553170	6	32,81,125,214,109,88,	0,62072,62803,133480,146720,153478,
#Partially deleted in new
chr1	213832590	213988508	chr1:213832590-213988508	0	-	213832590	213832590	8553170	6	58,93,81,125,165,188,	0,7917,62072,62803,83344,155730,
#Partially deleted in new
chr1	213832590	213987531	chr1:213832590-213987531	0	-	213832590	213832590	8553170	9	32,60,93,149,81,125,165,188,28,	0,7147,7917,8090,62072,62803,83344,133480,154913,
#Partially deleted in new
chr1	213832590	213966214	chr1:213832590-213966214	0	-	213832590	213832590	8553170	4	32,81,165,144,	0,62072,83344,133480,
#Partially deleted in new
chr1	213832592	213841388	chr1:213832592-213841388	0	-	213832592	213832592	8553170	2	30,881,	0,7915,
#Partially deleted in new
chr1	213832596	213986162	chr1:213832596-213986162	0	-	213832596	213832596	8553170	7	26,60,93,81,92,188,94,	0,7141,7911,62066,62830,133474,153472,
#Partially deleted in new
chr1	213832600	213966264	chr1:213832600-213966264	0	-	213832600	213832600	8553170	8	22,60,93,81,125,84,165,194,	0,7137,7907,62062,62793,63207,83334,133470,
#Partially deleted in new
chr1	213840727	213966258	chr1:213840727-213966258	1	-	213840727	213840727	8553170	4	102,81,125,188,	0,53935,54666,125343,
#Deleted in new
chr1	213894662	213895970	chr1:213894662-213895970	0	-	213894662	213894662	8553170	2	81,577,	0,731,
#Partially deleted in new
chr1	213894662	213981324	chr1:213894662-213981324	1	-	213894662	213894662	8553170	6	81,125,115,214,109,29,	0,731,6632,71408,84648,86633,
#Deleted in new
chr1	213924748	213926654	chr1:213924748-213926654	3	-	213924748	213924748	5263520	1	1906,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	213965893	213986153	chr1:213965893-213986153	1	-	213965893	213965893	8553170	2	391,85,	0,20175,
#Partially deleted in new
chr1	213966070	213968746	chr1:213966070-213968746	1	-	213966070	213966070	8553170	3	214,454,123,	0,647,2553,
#Partially deleted in new
chr1	213966131	213987630	chr1:213966131-213987630	1	-	213966131	213966131	8553170	5	153,290,109,117,51,	0,10997,13179,15164,21448,
#Deleted in new
chr1	213983180	213997225	chr1:213983180-213997225	0	+	213996535	213997225	789624	2	143,757,	0,13288,
#Deleted in new
chr1	213983792	213986419	chr1:213983792-213986419	3	-	213983792	213983792	8553170	1	2627,	0,
#Partially deleted in new
chr1	213987934	214041502	chr1:213987934-214041502	3	+	213996535	214035834	0	5	549,1794,106,195,5854,	0,8534,17232,23586,47714,
#Partially deleted in new
chr1	213987942	214041252	chr1:213987942-214041252	1	+	213996535	214035834	0	5	541,1792,108,195,5604,	0,8526,17222,23578,47706,
#Deleted in new
chr1	213987953	213988647	chr1:213987953-213988647	0	+	213987953	213987953	8553170	2	530,32,	0,662,
#Partially deleted in new
chr1	213988500	214041502	chr1:213988500-214041502	1	+	213996535	214035834	0	5	221,1794,106,195,5854,	0,7968,16666,23020,47148,
#Partially deleted in new
chr1	213988516	214036423	chr1:213988516-214036423	1	+	213996535	214035834	0	5	205,1792,108,195,775,	0,7952,16648,23004,47132,
#Deleted in new
chr1	213989717	213996964	chr1:213989717-213996964	0	+	213996535	213996964	789624	2	64,496,	0,6751,
#Deleted in new
chr1	214028890	214030901	chr1:214028890-214030901	3	-	214028890	214028890	8553170	1	2011,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	214051193	214187773	chr1:214051193-214187773	3	-	214051193	214051193	8553170	5	858,117,242,196,661,	0,4162,7725,21049,135919,
#Partially deleted in new
chr1	214281101	214337131	chr1:214281101-214337131	0	+	214281101	214281101	8553170	11	326,64,111,61,125,68,103,111,121,2291,428,	0,24085,33660,36977,37757,43539,46520,49066,49848,50916,55602,
#Partially deleted in new
chr1	214281124	214337130	chr1:214281124-214337130	0	+	214281124	214281124	8553170	10	303,64,111,61,125,68,103,111,3359,427,	0,24062,33637,36954,37734,43516,46497,49043,49825,55579,
#Partially deleted in new
chr1	214281221	214337131	chr1:214281221-214337131	0	+	214281221	214281221	8553170	11	206,111,61,125,68,103,111,121,175,109,428,	0,33540,36857,37637,43419,46400,48946,49728,50796,52978,55482,
#Partially deleted in new
chr1	214281232	214337131	chr1:214281232-214337131	3	+	214281254	214336784	0	12	195,64,111,61,125,68,103,111,121,175,109,428,	0,23954,33529,36846,37626,43408,46389,48935,49717,50785,52967,55471,
#Deleted in new
chr1	214327493	214331070	chr1:214327493-214331070	0	+	214327493	214327493	8553170	3	231,111,121,	0,2674,3456,
#Partially deleted in new
chr1	214330976	214337131	chr1:214330976-214337131	0	+	214330976	214336725	789624	3	94,175,433,	0,1041,5722,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	214344171	214357615	chr1:214344171-214357615	3	-	214344171	214344171	8553170	3	239,128,151,	0,4014,13293,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	214348695	214551223	chr1:214348695-214551223	3	-	214357921	214464803	0	19	9355,164,235,129,219,144,1478,79,58,83,88,89,88,71,68,98,170,328,41,	0,15816,20761,24015,27523,29263,34615,38148,42292,44999,46203,49217,52989,54187,62988,65933,103109,115934,202487,
#Partially deleted in new
chr1	214357750	214551223	chr1:214357750-214551223	1	-	214397946	214464803	789624	18	300,164,235,129,219,144,1478,79,58,83,88,89,71,68,98,170,328,41,	0,6761,11706,14960,18468,20208,25560,29093,33237,35944,37148,40162,45132,53933,56878,94054,106879,193432,
#Partially deleted in new
chr1	214372245	214376406	chr1:214372245-214376406	0	-	214372245	214372245	8553170	3	125,129,188,	0,465,3973,
#Partially deleted in new
chr1	214464701	214552449	chr1:214464701-214552449	0	-	214464701	214464701	8553170	3	256,96,135,	0,86481,87613,
#Deleted in new
chr1	214482812	214483387	chr1:214482812-214483387	7	-	214482812	214482812	16724991	1	575,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	214528275	214551602	chr1:214528275-214551602	0	-	214528275	214528275	8553170	2	5132,420,	0,22907,
#Deleted in new
chr1	214532194	214533467	chr1:214532194-214533467	7	+	214532194	214532194	16724991	1	1273,	0,
#Partially deleted in new
chr1	214603194	214664588	chr1:214603194-214664588	3	+	214613754	214663794	789624	20	127,203,197,122,92,292,203,126,129,123,136,3404,2844,153,177,162,163,477,179,998,	0,10519,11637,15378,15934,17460,18884,25851,27339,29285,34671,36726,41362,45480,48515,49633,52046,53738,55655,60396,
#Partially deleted in new
chr1	214603194	214615190	chr1:214603194-214615190	0	+	214603194	214603194	8553170	3	127,203,359,	0,10519,11637,
#Partially deleted in new
chr1	214603483	214613893	chr1:214603483-214613893	0	+	214603483	214603483	8553170	2	165,180,	0,10230,
#Deleted in new
chr1	214605469	214608840	chr1:214605469-214608840	7	-	214605469	214605469	16724991	2	610,527,	0,2844,
#Deleted in new
chr1	214612959	214613398	chr1:214612959-214613398	7	-	214612959	214612959	16724991	1	439,	0,
#Partially deleted in new
chr1	214647966	214653493	chr1:214647966-214653493	1	+	214647966	214653493	789624	6	13,14,153,177,162,9,	0,518,708,3743,4861,5518,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	214648674	214654419	chr1:214648674-214654419	0	+	214648674	214648674	8553170	4	153,177,162,935,	0,3035,4153,4810,
#Partially deleted in new
chr1	214655147	214657410	chr1:214655147-214657410	0	+	214655147	214655147	8553170	2	256,478,	0,1785,
#Partially deleted in new
chr1	214870733	214871716	chr1:214870733-214871716	7	+	214870733	214870733	16724991	1	983,	0,
#Deleted in new
chr1	214943122	214943540	chr1:214943122-214943540	7	+	214943122	214943122	16724991	1	418,	0,
#Partially deleted in new
chr1	215005774	215236020	chr1:215005774-215236020	0	+	215005921	215169312	789624	7	181,311,161,187,140,352,330,	0,80593,163424,166222,189178,229053,229916,
#Partially deleted in new
chr1	215005849	215235191	chr1:215005849-215235191	0	+	215005921	215195015	0	6	106,311,118,161,140,364,	0,80518,118783,163349,189103,228978,
#Partially deleted in new
chr1	215005854	215235219	chr1:215005854-215235219	1	+	215005921	215235145	0	7	101,311,118,161,187,140,392,	0,80513,118778,163344,166142,189098,228973,
#Partially deleted in new
chr1	215081792	215169245	chr1:215081792-215169245	0	+	215086489	215169245	789624	5	69,21,311,118,47,	0,329,4575,42840,87406,
#Partially deleted in new
chr1	215083123	215235217	chr1:215083123-215235217	3	+	215083306	215235145	0	7	184,311,118,161,187,140,390,	0,3244,41509,86075,88873,111829,151704,
#Partially deleted in new
chr1	215083234	215195057	chr1:215083234-215195057	0	+	215083385	215169312	789624	5	197,311,161,187,105,	0,3133,85964,88762,111718,
#Partially deleted in new
chr1	215083234	215235154	chr1:215083234-215235154	0	+	215083306	215195015	789624	6	73,311,118,161,140,327,	0,3133,41398,85964,111718,151593,
#Partially deleted in new
chr1	215083235	215237093	chr1:215083235-215237093	1	+	215083385	215235145	0	7	196,311,118,161,187,140,2266,	0,3132,41397,85963,88761,111717,151592,
#Partially deleted in new
chr1	215083516	215169265	chr1:215083516-215169265	0	+	215086489	215169265	789624	4	148,311,118,67,	0,2851,41116,85682,
#Deleted in new
chr1	215376483	215377374	chr1:215376483-215377374	7	+	215376483	215376483	16724991	1	891,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	215393645	215394418	chr1:215393645-215394418	3	-	215393645	215393645	8553170	2	122,460,	0,313,
#Partially deleted in new
chr1	215567391	215621807	chr1:215567391-215621807	3	+	215567685	215620618	789624	18	377,54,46,74,59,81,138,91,191,116,88,117,171,156,97,185,139,1751,	0,6394,6681,8509,10278,10609,11608,12517,19103,27964,34475,34693,36740,40625,44433,51494,51761,52665,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	215573785	215581179	chr1:215573785-215581179	0	+	215573785	215581068	789624	8	54,46,74,59,81,138,91,208,	0,287,2115,3884,4215,5214,6123,7186,
#Deleted in new
chr1	215618244	215621731	chr1:215618244-215621731	0	+	215618244	215618244	8553170	2	1047,1675,	0,1812,
#Deleted in new
chr1	215618704	215620203	chr1:215618704-215620203	0	+	215618704	215618704	8553170	3	366,139,147,	0,448,1352,
#Partially deleted in new
chr1	215622893	216423396	chr1:215622893-216423396	3	-	215625780	216422336	789624	72	2977,222,245,84,177,209,239,210,322,1517,228,355,163,159,158,184,108,199,155,198,205,224,219,169,199,113,203,210,164,123,335,629,143,151,180,163,152,148,172,160,162,114,192,81,204,274,131,180,102,127,131,231,145,170,270,495,159,164,184,642,196,131,196,94,222,185,295,64,133,166,689,183,	0,5920,11565,16261,17664,24628,25634,27698,48078,51206,57255,105136,118481,120283,135701,136766,143787,156949,159148,159844,163776,167165,176013,190842,194103,215097,221400,222930,244113,254864,255870,265532,277181,277861,311722,342423,347731,370126,375993,377509,423537,425640,447207,449995,450203,455195,460562,461804,463825,466119,474189,552358,567329,573659,575421,576733,584379,594493,609059,623691,628009,666386,669281,698989,700580,701274,702411,704697,742059,795620,798958,800320,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	215630025	215630117	chr1:215630025-215630117	3	-	215630025	215630025	8553170	1	92,	0,
#Partially deleted in new
chr1	215886581	215901464	chr1:215886581-215901464	3	+	215886581	215886581	8553170	2	60,740,	0,14143,
#Partially deleted in new
chr1	216072464	216086917	chr1:216072464-216086917	3	+	216072464	216072464	789624	3	136,129,196,	0,6608,14257,
#Partially deleted in new
chr1	216072728	216086905	chr1:216072728-216086905	1	+	216072728	216072728	8553170	3	78,129,184,	0,6344,13993,
#Partially deleted in new
chr1	216072805	216086905	chr1:216072805-216086905	0	+	216072805	216072805	8553170	2	159,184,	0,13916,
#Partially deleted in new
chr1	216079072	216086905	chr1:216079072-216086905	1	+	216079072	216079072	8553170	3	129,77,184,	0,892,7649,
#Partially deleted in new
chr1	216083369	216089139	chr1:216083369-216089139	0	-	216083369	216083369	8553170	4	217,180,102,127,	0,1328,3349,5643,
#Partially deleted in new
chr1	216083379	216085108	chr1:216083379-216085108	0	-	216083379	216083379	8553170	2	207,411,	0,1318,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr1	216173945	216423396	chr1:216173945-216423396	1	-	216175237	216422336	789624	21	1537,145,170,270,495,159,164,184,642,196,131,196,94,222,185,295,64,133,166,689,183,	0,16277,22607,24369,25681,33327,43441,58007,72639,76957,115334,118229,147937,149528,150222,151359,153645,191007,244568,247906,249268,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	216194050	216204366	chr1:216194050-216204366	3	+	216194050	216194050	8553170	3	179,183,337,	0,1692,9979,
#Deleted in new
chr1	216201634	216201826	chr1:216201634-216201826	7	-	216201634	216201634	16724991	1	192,	0,
#Partially deleted in new
chr1	216503245	217089645	chr1:216503245-217089645	1	-	216506938	216677478	0	9	3938,270,162,111,117,416,118,92,139,	0,15906,60973,64742,147727,173830,361815,436336,586261,
#Partially deleted in new
chr1	216503245	216723472	chr1:216503245-216723472	1	-	216506938	216677478	0	9	3938,270,162,111,117,416,119,176,233,	0,15906,60973,64742,147727,173830,211270,211828,219994,
#Partially deleted in new
chr1	216503245	216715253	chr1:216503245-216715253	1	-	216506938	216677478	0	7	3938,270,162,111,117,416,180,	0,15906,60973,64742,147727,173830,211828,
#Partially deleted in new
chr1	216503253	217089605	chr1:216503253-217089605	1	-	216506938	216677478	0	8	3930,270,162,111,117,416,92,99,	0,15898,60965,64734,147719,173822,436328,586253,
#Partially deleted in new
chr1	216503253	216805367	chr1:216503253-216805367	1	-	216506938	216677478	0	7	3930,270,162,111,117,416,425,	0,15898,60965,64734,147719,173822,301689,
#Partially deleted in new
chr1	216503253	216939673	chr1:216503253-216939673	1	-	216506938	216677478	0	8	3930,270,162,111,117,416,118,92,	0,15898,60965,64734,147719,173822,361807,436328,
#Partially deleted in new
chr1	216503253	216723453	chr1:216503253-216723453	1	-	216506938	216707429	0	8	3930,270,183,111,117,416,128,210,	0,15898,60965,64734,147719,173822,204105,219990,
#Partially deleted in new
chr1	216503253	216939673	chr1:216503253-216939673	1	-	216506938	216677478	0	8	3930,270,162,111,117,416,176,92,	0,15898,60965,64734,147719,173822,211820,436328,
#Partially deleted in new
chr1	216503253	216723453	chr1:216503253-216723453	1	-	216506938	216723299	0	7	3930,270,162,111,117,416,210,	0,15898,60965,64734,147719,173822,219990,
#Partially deleted in new
chr1	216503253	217137754	chr1:216503253-217137754	1	-	216506938	216677478	0	9	3930,270,162,111,117,416,118,92,88,	0,15898,60965,64734,147719,173822,361807,436328,634413,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	216505453	217076931	chr1:216505453-217076931	1	-	216506938	216677478	0	8	1730,270,162,111,416,118,472,80,	0,13698,58765,62534,171622,359607,494799,571398,
#Partially deleted in new
chr1	216505489	216939670	chr1:216505489-216939670	1	-	216506938	216677478	0	9	1694,270,162,111,117,416,118,38,89,	0,13662,58729,62498,145483,171586,359571,431172,434092,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	216506787	217076889	chr1:216506787-217076889	1	-	216506938	216677478	0	9	396,270,162,111,117,416,92,472,38,	0,12364,57431,61200,144185,170288,432794,493465,570064,
#Partially deleted in new
chr1	216519151	216723332	chr1:216519151-216723332	0	-	216519151	216677478	789624	8	270,162,111,117,416,119,176,93,	0,45067,48836,131821,157924,195364,195922,204088,
#Partially deleted in new
chr1	216567987	217078288	chr1:216567987-217078288	0	-	216701436	216707429	789624	5	111,85,128,92,153,	0,133437,139371,371594,510148,
#Partially deleted in new
chr1	216677200	216723416	chr1:216677200-216723416	0	-	216677200	216677478	789624	3	291,119,173,	0,37315,46043,
#Partially deleted in new
chr1	216677311	216723452	chr1:216677311-216723452	0	-	216677311	216677478	789624	3	180,176,209,	0,37762,45932,
#Partially deleted in new
chr1	216677327	216723425	chr1:216677327-216723425	0	-	216677327	216677478	789624	4	164,131,107,182,	0,4568,8754,45916,
#Partially deleted in new
chr1	216707419	216723429	chr1:216707419-216723429	0	-	216707419	216707419	8553170	4	67,119,176,186,	0,7096,7654,15824,
#Partially deleted in new
chr1	216855041	217078360	chr1:216855041-217078360	0	-	216855041	216855041	8553170	4	84,118,92,225,	0,10019,84540,223094,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	216862229	217089636	chr1:216862229-217089636	0	-	216862229	216862229	8553170	3	2949,92,130,	0,77352,227277,
#Partially deleted in new
chr1	216865060	217090547	chr1:216865060-217090547	0	-	216865060	216865060	8553170	3	118,92,117,	0,74521,225370,
#Partially deleted in new
chr1	216865116	217089613	chr1:216865116-217089613	0	-	216865116	216865116	8553170	4	62,92,60,107,	0,74465,120641,224390,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	217426991	217631082	chr1:217426991-217631082	3	-	217431144	217630971	789624	10	4374,89,71,40,68,80,183,62,717,167,	0,22257,64688,71364,87830,183329,183897,187149,192791,203924,
#Partially deleted in new
chr1	217491505	217498764	chr1:217491505-217498764	0	-	217491505	217491505	8553170	3	245,61,409,	0,3509,6850,
#Partially deleted in new
chr1	217492500	217610400	chr1:217492500-217610400	0	-	217492500	217492500	8553170	5	193,61,40,68,80,	0,2514,5855,22321,117820,
#Partially deleted in new
chr1	217498179	217610379	chr1:217498179-217610379	0	-	217498179	217498179	8553170	3	216,68,59,	0,16642,112141,
#Partially deleted in new
chr1	217608183	217631082	chr1:217608183-217631082	1	-	217610159	217630971	789624	6	2009,80,183,62,717,167,	0,2137,2705,5957,11599,22732,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	217631323	217871696	chr1:217631323-217871696	3	+	217631378	217862854	789624	11	123,90,82,51,104,124,204,149,133,83,4675,	0,17558,19773,37709,51934,110651,143010,150850,170394,231450,235698,
#Partially deleted in new
chr1	217631323	217774424	chr1:217631323-217774424	0	+	217631378	217665281	789624	8	123,90,82,186,51,104,120,91,	0,17558,19773,33955,37709,51934,110655,143010,
#Partially deleted in new
chr1	217801717	217867588	chr1:217801717-217867588	0	+	217801717	217801717	8553170	3	133,83,711,	0,61056,65160,
#Deleted in new
chr1	217850402	217850633	chr1:217850402-217850633	7	-	217850402	217850402	16724991	1	231,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	217862774	217867133	chr1:217862774-217867133	0	+	217862774	217862774	8553170	3	82,126,112,	0,3703,4247,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	217892899	217920804	chr1:217892899-217920804	3	+	217892899	217892899	789624	4	27,224,112,1221,	0,18858,25293,26684,
#Deleted in new
chr1	218031834	218033660	chr1:218031834-218033660	3	+	218031834	218031834	8553170	2	127,88,	0,1738,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	218043504	218059140	chr1:218043504-218059140	3	+	218043504	218043504	789624	4	1093,120,108,407,	0,2629,7650,15229,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	218129794	218129952	chr1:218129794-218129952	3	+	218129794	218129794	8553170	1	158,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	218285286	218337983	chr1:218285286-218337983	3	+	218285316	218331091	789624	5	169,266,98,202,7036,	0,17007,19741,22144,45661,
#Partially deleted in new
chr1	218285341	218302671	chr1:218285341-218302671	0	+	218285341	218285341	8553170	2	114,378,	0,16952,
#Deleted in new
chr1	218301261	218301972	chr1:218301261-218301972	7	-	218301261	218301261	16724991	1	711,	0,
#Deleted in new
chr1	218338540	218338756	chr1:218338540-218338756	7	+	218338540	218338540	16724991	1	216,	0,
#Deleted in new
chr1	218344195	218345678	chr1:218344195-218345678	3	-	218344195	218344195	789624	3	267,214,76,	0,979,1407,
#Partially deleted in new
chr1	218346234	218444619	chr1:218346234-218444619	1	+	218346701	218441362	0	8	813,84,164,133,111,178,154,3416,	0,17099,58934,87847,88103,89735,91108,94969,
#Partially deleted in new
chr1	218346234	218444619	chr1:218346234-218444619	3	+	218346701	218441362	0	7	813,164,133,111,178,154,3416,	0,58934,87847,88103,89735,91108,94969,
#Partially deleted in new
chr1	218347037	218434312	chr1:218347037-218434312	0	+	218347037	218347037	8553170	3	10,164,231,	0,58131,87044,
#Partially deleted in new
chr1	218434125	218442141	chr1:218434125-218442141	0	+	218434125	218434125	8553170	5	127,111,178,154,938,	0,212,1844,3217,7078,
#Deleted in new
chr1	218442625	218443996	chr1:218442625-218443996	3	+	218442625	218442625	789624	1	1371,	0,
#Deleted in new
chr1	218524839	218525978	chr1:218524839-218525978	1	+	218524839	218524839	8553170	2	241,572,	0,567,
#Deleted in new
chr1	218881599	218882650	chr1:218881599-218882650	7	-	218881599	218881599	16724991	1	1051,	0,
#Partially deleted in new
chr1	218912756	218916184	chr1:218912756-218916184	3	-	218912756	218912756	8553170	3	259,84,47,	0,2478,3381,
#Partially deleted in new
chr1	219086601	219173961	chr1:219086601-219173961	3	-	219086601	219086601	8553170	4	59,93,80,492,	0,63337,69518,86868,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	219173843	219212865	chr1:219173843-219212865	3	+	219173890	219211728	0	5	138,100,170,116,1374,	0,5303,19238,36688,37648,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	219173868	219212865	chr1:219173868-219212865	0	+	219173868	219173868	8553170	4	113,100,116,1374,	0,5278,36663,37623,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	219173874	219212865	chr1:219173874-219212865	1	+	219173890	219211728	0	5	107,100,122,116,1374,	0,5272,19255,36657,37617,
#Partially deleted in new
chr1	219173875	219193485	chr1:219173875-219193485	0	+	219173875	219173875	8553170	4	106,100,46,404,	0,5271,5505,19206,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	219173883	219212865	chr1:219173883-219212865	0	+	219173883	219173883	8553170	5	98,100,27,116,1374,	0,5263,5516,36648,37608,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	219173894	219212865	chr1:219173894-219212865	0	+	219173894	219173894	8553170	6	87,100,27,170,116,1374,	0,5252,5505,19187,36637,37597,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	219173895	219212865	chr1:219173895-219212865	0	+	219173895	219173895	8553170	5	409,100,170,116,1374,	0,5251,19186,36636,37596,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	219173926	219212865	chr1:219173926-219212865	0	+	219173926	219173926	8553170	4	55,100,133,1374,	0,5220,36588,37565,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	219174193	219212865	chr1:219174193-219212865	0	+	219174193	219174193	8553170	4	111,100,116,1374,	0,4953,36338,37298,
#Partially deleted in new
chr1	219174970	219211530	chr1:219174970-219211530	0	+	219174970	219174970	8553170	5	50,100,170,116,39,	0,4176,18111,35561,36521,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	219198542	219212865	chr1:219198542-219212865	0	+	219198542	219198542	8553170	3	225,116,1374,	0,11989,12949,
#Deleted in new
chr1	219199913	219200567	chr1:219199913-219200567	7	-	219199913	219199913	16724991	1	654,	0,
#Deleted in new
chr1	219210341	219211827	chr1:219210341-219211827	0	+	219210341	219210341	8553170	2	306,336,	0,1150,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	219222247	219225497	chr1:219222247-219225497	3	-	219222247	219222247	8553170	2	940,186,	0,3064,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	219270773	219273387	chr1:219270773-219273387	3	+	219270773	219270773	8553170	1	2614,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	219409522	219459194	chr1:219409522-219459194	3	-	219409522	219409522	8553170	3	745,222,120,	0,2195,49552,
#Partially deleted in new
chr1	219435151	219442642	chr1:219435151-219442642	0	-	219435151	219435151	8553170	3	262,118,71,	0,1904,7420,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	219435152	219459369	chr1:219435152-219459369	1	-	219435152	219435152	8553170	3	261,118,512,	0,1903,23705,
#Deleted in new
chr1	219609626	219612062	chr1:219609626-219612062	7	-	219609626	219609626	16724991	1	2436,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	219685426	219958647	chr1:219685426-219958647	0	-	219685426	219685426	8553170	9	306,101,777,42,101,177,240,78,80,	0,104921,105852,132236,137093,198699,232828,241601,273141,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	219761788	219761875	chr1:219761788-219761875	7	+	219761788	219761788	16724991	1	87,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	219913505	219928651	chr1:219913505-219928651	0	-	219927111	219928440	789624	4	2443,240,116,851,	0,4749,13522,14295,
#Partially deleted in new
chr1	219914263	219919030	chr1:219914263-219919030	0	-	219914263	219914263	8553170	2	1685,776,	0,3991,
#Partially deleted in new
chr1	219915153	219928602	chr1:219915153-219928602	3	-	219915448	219928440	789624	4	795,240,78,802,	0,3101,11874,12647,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	219962651	219962865	chr1:219962651-219962865	3	+	219962651	219962651	8553170	1	214,	0,
#Partially deleted in new
chr1	219968600	220046658	chr1:219968600-220046658	3	-	219968805	220046388	0	32	356,65,79,161,174,198,156,102,80,73,210,52,263,234,360,118,113,208,137,111,60,85,234,172,193,127,95,140,157,100,85,316,	0,457,3468,4637,9945,10817,11484,12155,12777,14171,14588,15605,18541,19989,28382,32537,36647,37505,38601,42345,49848,50394,51387,53746,55663,56531,61785,63786,64901,66313,71584,77742,
#Deleted in new
chr1	219968688	219969247	chr1:219968688-219969247	0	-	219968688	219968688	8553170	2	268,190,	0,369,
#Partially deleted in new
chr1	219982509	219984258	chr1:219982509-219984258	0	-	219982509	219982509	8553170	3	335,210,53,	0,679,1696,
#Partially deleted in new
chr1	219987295	220046451	chr1:219987295-220046451	0	-	219987295	220046388	789624	21	109,234,360,118,113,208,137,111,21,60,85,234,172,193,127,95,140,157,100,85,109,	0,1294,9687,13842,17952,18810,19906,23650,30830,31153,31699,32692,35051,36968,37836,43090,45091,46206,47618,52889,59047,
#Partially deleted in new
chr1	219997175	220007365	chr1:219997175-220007365	0	-	219997175	219997175	8553170	5	167,118,113,208,164,	0,3962,8072,8930,10026,
#Partially deleted in new
chr1	220001200	220046530	chr1:220001200-220046530	0	-	220025201	220046388	789624	12	55,113,111,85,172,193,127,140,157,100,85,188,	0,4047,9745,17794,21146,23063,23931,31186,32301,33713,38984,45142,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	220057481	220089853	chr1:220057481-220089853	1	-	220058843	220079846	0	9	1511,106,198,92,49,108,105,128,168,	0,2204,5275,9820,11902,15368,16485,22245,32204,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	220057481	220089853	chr1:220057481-220089853	1	-	220058843	220079846	0	8	1511,106,198,92,49,105,128,168,	0,2204,5275,9820,11902,16485,22245,32204,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	220057481	220089853	chr1:220057481-220089853	1	-	220058843	220074026	0	8	1511,106,198,92,49,108,105,210,	0,2204,5275,9820,11902,15368,16485,32162,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	220057483	220090462	chr1:220057483-220090462	3	-	220058843	220079846	0	10	1509,106,198,92,49,108,105,128,266,176,	0,2202,5273,9818,11900,15366,16483,22243,32202,32803,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	220057730	220089772	chr1:220057730-220089772	1	-	220057911	220079846	789624	11	187,47,106,198,45,92,49,108,105,128,87,	0,1215,1955,5026,8342,9571,11653,15119,16236,21996,31955,
#Partially deleted in new
chr1	220062798	220089733	chr1:220062798-220089733	0	-	220062798	220062798	8553170	6	156,96,92,49,105,48,	0,4231,4503,6585,11168,26887,
#Partially deleted in new
chr1	220062810	220089769	chr1:220062810-220089769	0	-	220062810	220079846	789624	6	144,92,49,105,128,126,	0,4491,6573,11156,16916,26833,
#Partially deleted in new
chr1	220062911	220089827	chr1:220062911-220089827	0	-	220062911	220079846	789624	6	43,92,49,105,128,142,	0,4390,6472,11055,16815,26774,
#Partially deleted in new
chr1	220062915	220089833	chr1:220062915-220089833	0	-	220062915	220074026	789624	6	39,92,49,108,105,190,	0,4386,6468,9934,11051,26728,
#Partially deleted in new
chr1	220067014	220074067	chr1:220067014-220074067	0	-	220067014	220067014	8553170	4	379,49,108,101,	0,2369,5835,6952,
#Partially deleted in new
chr1	220067383	220089812	chr1:220067383-220089812	0	-	220067383	220079846	789624	6	10,49,108,105,128,169,	0,2000,5466,6583,12343,22260,
#Partially deleted in new
chr1	220094101	220148041	chr1:220094101-220148041	3	+	220094216	220147635	789624	23	382,123,160,149,50,110,91,116,170,91,152,161,103,94,109,103,126,132,107,146,191,145,549,	0,2002,6388,8027,8261,8393,8585,9345,11789,12959,16684,20212,31135,32648,40300,42707,43816,44906,46081,47701,48842,51407,53391,
#Deleted in new
chr1	220117852	220117962	chr1:220117852-220117962	3	-	220117852	220117852	5263520	1	110,	0,
#Deleted in new
chr1	220118156	220118241	chr1:220118156-220118241	3	-	220118156	220118156	5263520	1	85,	0,
#Partially deleted in new
chr1	220137641	220140218	chr1:220137641-220140218	0	+	220137641	220137641	8553170	3	402,132,36,	0,1366,2541,
#Partially deleted in new
chr1	220140180	220143344	chr1:220140180-220143344	0	+	220140180	220140180	8553170	3	109,146,401,	0,1622,2763,
#Deleted in new
chr1	220143963	220144351	chr1:220143963-220144351	7	-	220143963	220143963	16724991	1	388,	0,
#Boundary problem: need 35, got 0, diff 35, mapped 0.0
chr1	220148292	220272454	chr1:220148292-220272454	3	-	220151250	220272337	789624	35	3114,159,222,90,219,75,36,71,67,107,174,229,161,106,98,214,128,91,65,83,144,217,140,90,80,149,99,100,102,76,48,82,124,65,232,	0,3313,4892,5675,8977,9509,11093,13905,16440,19000,19209,22599,23596,24344,33964,34425,35743,37358,41410,41771,42084,42775,44947,46785,47005,47957,53983,57614,62095,62508,62662,64594,65563,84506,123930,
#Partially deleted in new
chr1	220151182	220154060	chr1:220151182-220154060	0	-	220151182	220151182	8553170	3	582,222,93,	0,2002,2785,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	220151255	220153722	chr1:220151255-220153722	0	-	220151255	220151255	8553170	3	151,159,538,	0,350,1929,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	220151604	220154428	chr1:220151604-220154428	0	-	220151604	220151604	8553170	3	160,222,461,	0,1580,2363,
#Partially deleted in new
chr1	220185654	220272430	chr1:220185654-220272430	0	-	220185654	220185654	8553170	6	87,65,83,49,83,208,	0,4048,4409,4722,85502,86568,
#Partially deleted in new
chr1	220196183	220272414	chr1:220196183-220272414	0	-	220196183	220196183	8553170	7	215,99,100,102,48,65,192,	0,6092,9723,14204,14771,36615,76039,
#Deleted in new
chr1	220200537	220200619	chr1:220200537-220200619	3	-	220200537	220200537	5263520	1	82,	0,
#Deleted in new
chr1	220200545	220200676	chr1:220200545-220200676	3	-	220200545	220200545	789624	1	131,	0,
#Partially deleted in new
chr1	220202275	220211377	chr1:220202275-220211377	0	-	220202275	220211377	789624	6	99,100,102,76,48,90,	0,3631,8112,8525,8679,9012,
#Partially deleted in new
chr1	220205906	220272370	chr1:220205906-220272370	0	-	220210855	220272337	789624	6	100,102,76,48,65,148,	0,4481,4894,5048,26892,66316,
#Deleted in new
chr1	220207617	220208282	chr1:220207617-220208282	7	+	220207617	220207617	16724991	1	665,	0,
#Partially deleted in new
chr1	220219434	220272337	chr1:220219434-220272337	0	-	220219434	220219434	8553170	3	195,65,115,	0,13364,52788,
#Deleted in new
chr1	220220290	220220593	chr1:220220290-220220593	7	+	220220290	220220290	16724991	1	303,	0,
#Partially deleted in new
chr1	220253569	220254536	chr1:220253569-220254536	7	+	220253569	220253569	16724991	1	967,	0,
#Partially deleted in new
chr1	220265984	220272361	chr1:220265984-220272361	0	-	220265984	220265984	8553170	2	1767,139,	0,6238,
#Deleted in new
chr1	220266705	220267917	chr1:220266705-220267917	7	-	220266705	220266705	16724991	1	1212,	0,
#Deleted in new
chr1	220313944	220315565	chr1:220313944-220315565	7	-	220313944	220313944	16724991	1	1621,	0,
#Deleted in new
chr1	220316666	220317599	chr1:220316666-220317599	7	-	220316666	220316666	16724991	1	933,	0,
#Deleted in new
chr1	220359730	220360183	chr1:220359730-220360183	3	-	220359730	220359730	8553170	2	195,50,	0,403,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	220401121	220404033	chr1:220401121-220404033	3	+	220401121	220401121	8553170	1	2912,	0,
#Deleted in new
chr1	220448515	220448853	chr1:220448515-220448853	7	+	220448515	220448515	16724991	1	338,	0,
#Deleted in new
chr1	220455153	220455312	chr1:220455153-220455312	7	-	220455153	220455153	16724991	1	159,	0,
#Partially deleted in new
chr1	220467953	220468808	chr1:220467953-220468808	7	+	220467953	220467953	16724991	2	505,35,	0,820,
#Partially deleted in new
chr1	220485103	220487043	chr1:220485103-220487043	3	-	220485103	220485103	8553170	2	337,53,	0,1887,
#Partially deleted in new
chr1	220528182	220664456	chr1:220528182-220664456	1	+	220528822	220662166	789624	17	691,204,54,49,66,71,57,237,120,100,113,154,194,101,165,252,2645,	0,51171,52882,70148,71615,75884,87756,90127,90453,102852,104018,107193,107650,122437,123803,124918,133629,
#Partially deleted in new
chr1	220528182	220664456	chr1:220528182-220664456	1	+	220528822	220662166	789624	18	691,204,54,49,66,71,57,237,120,100,113,154,194,101,165,255,45,2645,	0,51171,52882,70148,71615,75884,87756,90127,90453,102852,104018,107193,107650,122437,123803,124915,129607,133629,
#Partially deleted in new
chr1	220528225	220664461	chr1:220528225-220664461	1	+	220528822	220662166	0	16	648,204,54,49,71,57,237,120,100,113,154,194,101,165,252,2650,	0,51128,52839,70105,75841,87713,90084,90410,102809,103975,107150,107607,122394,123760,124875,133586,
#Partially deleted in new
chr1	220528556	220662458	chr1:220528556-220662458	3	+	220528822	220662166	0	18	317,204,54,49,66,71,57,237,120,100,113,154,194,101,165,252,45,647,	0,50797,52508,69774,71241,75510,87382,89753,90079,102478,103644,106819,107276,122063,123429,124544,129233,133255,
#Partially deleted in new
chr1	220528849	220579508	chr1:220528849-220579508	0	+	220528849	220528849	8553170	3	24,91,155,	0,47796,50504,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	220571738	220572035	chr1:220571738-220572035	3	-	220571738	220571738	8553170	1	297,	0,
#Partially deleted in new
chr1	220625739	220627448	chr1:220625739-220627448	7	+	220625739	220625739	16724991	2	793,605,	0,1104,
#Deleted in new
chr1	220627249	220628056	chr1:220627249-220628056	5	+	220627249	220627249	16724991	1	807,	0,
#Partially deleted in new
chr1	220689844	220699157	chr1:220689844-220699157	3	+	220690402	220696731	789624	2	867,2546,	0,6767,
#Partially deleted in new
chr1	220748224	220755060	chr1:220748224-220755060	0	+	220748531	220754380	789624	3	579,65,114,	0,6143,6722,
#Partially deleted in new
chr1	220748268	220784240	chr1:220748268-220784240	1	+	220748531	220783942	789624	5	535,174,163,141,322,	0,6678,13389,14641,35650,
#Partially deleted in new
chr1	220748333	220784815	chr1:220748333-220784815	3	+	220748531	220781901	789624	8	470,174,163,141,62,72,155,897,	0,6613,13324,14576,31684,31834,33444,35585,
#Partially deleted in new
chr1	220754971	220780149	chr1:220754971-220780149	0	+	220754971	220780083	789624	4	149,163,141,132,	0,6686,7938,25046,
#Partially deleted in new
chr1	220756277	220761764	chr1:220756277-220761764	0	+	220756277	220756277	8553170	2	145,107,	0,5380,
#Partially deleted in new
chr1	220779961	220784184	chr1:220779961-220784184	0	+	220779961	220779961	8553170	3	278,155,266,	0,1816,3957,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	220786758	220819657	chr1:220786758-220819657	3	+	220786944	220813418	789624	7	461,174,163,141,62,72,6366,	0,4732,9884,11115,18293,18444,26533,
#Deleted in new
chr1	220790954	220791664	chr1:220790954-220791664	0	+	220790954	220790954	8553170	2	173,174,	0,536,
#Partially deleted in new
chr1	220791490	220814388	chr1:220791490-220814388	0	+	220791490	220813418	789624	6	174,163,192,62,72,1097,	0,5152,6383,13561,13712,21801,
#Partially deleted in new
chr1	220793188	220814393	chr1:220793188-220814393	0	+	220793188	220793188	8553170	6	1167,163,141,62,72,1102,	0,3454,4685,11863,12014,20103,
#Partially deleted in new
chr1	220796752	220798905	chr1:220796752-220798905	0	+	220796752	220798205	789624	4	53,192,124,74,	0,1121,1399,2079,
#Partially deleted in new
chr1	220796754	220808976	chr1:220796754-220808976	0	+	220796754	220808892	789624	5	51,141,62,72,118,	0,1119,8297,8448,12104,
#Partially deleted in new
chr1	220797761	220805093	chr1:220797761-220805093	0	+	220797761	220797761	8553170	2	304,42,	0,7290,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	220825619	220826063	chr1:220825619-220826063	3	+	220825619	220825619	8553170	1	444,	0,
#Deleted in new
chr1	220825775	220825893	chr1:220825775-220825893	3	+	220825775	220825775	8553170	1	118,	0,
#Deleted in new
chr1	220828675	220829211	chr1:220828675-220829211	3	-	220828675	220828675	8553170	1	536,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	220829254	220832429	chr1:220829254-220832429	3	+	220829254	220829254	789624	4	188,215,242,317,	0,1438,1887,2858,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	220832762	220880140	chr1:220832762-220880140	3	-	220832762	220832762	789624	3	96,175,292,	0,255,47086,
#Deleted in new
chr1	220879399	220885059	chr1:220879399-220885059	3	+	220879857	220884704	789624	4	1050,180,185,865,	0,1794,2764,4795,
#Deleted in new
chr1	220879430	220885056	chr1:220879430-220885056	0	+	220879430	220879430	8553170	1	5626,	0,
#Deleted in new
chr1	220881068	220884493	chr1:220881068-220884493	0	+	220882192	220884493	789624	4	31,180,185,299,	0,125,1095,3126,
#Deleted in new
chr1	221133864	221134221	chr1:221133864-221134221	7	-	221133864	221133864	16724991	1	357,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	221330079	221336296	chr1:221330079-221336296	3	-	221330079	221330079	5263520	2	3906,434,	0,5783,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	221332638	221335920	chr1:221332638-221335920	1	-	221332638	221332638	8553170	3	436,151,58,	0,1196,3224,
#Deleted in new
chr1	221508558	221510979	chr1:221508558-221510979	3	+	221508558	221508558	8553170	2	612,195,	0,2226,
#Deleted in new
chr1	221549785	221550643	chr1:221549785-221550643	7	-	221549785	221549785	16724991	1	858,	0,
#Partially deleted in new
chr1	221701423	221742176	chr1:221701423-221742176	3	-	221702411	221739744	0	4	1254,372,854,196,	0,4671,37510,40557,
#Partially deleted in new
chr1	221701482	221736900	chr1:221701482-221736900	0	-	221706238	221706439	789624	3	1195,372,58,	0,4612,35360,
#Partially deleted in new
chr1	221702149	221742089	chr1:221702149-221742089	0	-	221706238	221706439	789624	3	528,372,109,	0,3945,39831,
#Partially deleted in new
chr1	221702426	221711816	chr1:221702426-221711816	0	-	221706238	221706439	789624	3	251,372,180,	0,3668,9210,
#Partially deleted in new
chr1	221827665	221840666	chr1:221827665-221840666	3	-	221827665	221827665	789624	4	91,55,146,131,	0,6626,12642,12870,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	221837333	221837437	chr1:221837333-221837437	3	-	221837333	221837333	8553170	1	104,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	221880980	221918712	chr1:221880980-221918712	1	-	221880980	221880980	8553170	5	304,89,97,109,121,	0,2819,32781,33442,37611,
#Duplicated in new
chr1	221913647	221978523	chr1:221913647-221978523	3	-	221913647	221913647	789624	4	211,109,121,164,	0,775,4944,64712,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	221966409	221984964	chr1:221966409-221984964	3	+	221966409	221966409	8553170	3	93,144,911,	0,16590,17644,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	222089168	222387434	chr1:222089168-222387434	3	-	222089168	222089168	8553170	4	397,111,52,115,	0,129210,296472,298151,
#Deleted in new
chr1	222261832	222262796	chr1:222261832-222262796	7	-	222261832	222261832	16724991	1	964,	0,
#Partially deleted in new
chr1	222452737	222454705	chr1:222452737-222454705	3	-	222452737	222452737	8553170	3	162,110,46,	0,1301,1922,
#Deleted in new
chr1	222468093	222470882	chr1:222468093-222470882	7	+	222468093	222468093	16724991	1	2789,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	222477251	222489700	chr1:222477251-222489700	1	-	222477251	222477251	8553170	5	53,191,124,65,112,	0,2116,3051,8805,12337,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	222479173	222486207	chr1:222479173-222486207	1	-	222479173	222479173	8553170	2	385,151,	0,6883,
#Partially deleted in new
chr1	222486059	222504622	chr1:222486059-222504622	0	-	222486059	222486059	8553170	2	62,257,	0,18306,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	222489585	222504481	chr1:222489585-222504481	3	-	222489585	222489585	8553170	4	200,124,65,70,	0,2488,11883,14826,
#Partially deleted in new
chr1	222501337	222504603	chr1:222501337-222504603	1	-	222501337	222501337	8553170	2	196,238,	0,3028,
#Deleted in new
chr1	222503631	222503735	chr1:222503631-222503735	3	-	222503631	222503631	8553170	1	104,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	222510168	222519732	chr1:222510168-222519732	7	-	222510168	222510168	16724991	4	78,118,66,110,	0,372,3795,9454,
#Partially deleted in new
chr1	222522257	222525239	chr1:222522257-222525239	0	-	222522257	222522257	8553170	4	630,83,178,289,	0,1354,1820,2693,
#Partially deleted in new
chr1	222522259	222548103	chr1:222522259-222548103	3	-	222522600	222548044	789624	9	628,83,82,146,127,332,144,653,380,	0,1352,4709,9706,16388,17750,19752,21277,25464,
#Partially deleted in new
chr1	222522808	222538843	chr1:222522808-222538843	0	-	222522808	222522808	8553170	5	79,83,82,146,196,	0,803,4160,9157,15839,
#Partially deleted in new
chr1	222538728	222540103	chr1:222538728-222540103	0	-	222538728	222538728	8553170	3	46,176,94,	0,158,1281,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	222557901	222589933	chr1:222557901-222589933	3	-	222558659	222588563	789624	12	367,150,155,124,67,159,131,199,114,170,123,207,	0,721,3462,5271,6157,11608,12633,19543,21857,26226,30541,31825,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	222557901	222589785	chr1:222557901-222589785	1	-	222558659	222579821	789624	11	367,150,155,124,67,159,131,199,114,123,59,	0,721,3462,5271,6157,11608,12633,19543,21857,30541,31825,
#Partially deleted in new
chr1	222558307	222589913	chr1:222558307-222589913	1	-	222558659	222588563	789624	11	465,155,124,67,159,131,199,114,170,123,187,	0,3056,4865,5751,11202,12227,19137,21451,25820,30135,31419,
#Partially deleted in new
chr1	222563284	222589759	chr1:222563284-222589759	0	-	222563284	222588563	789624	8	12,67,159,131,199,170,123,33,	0,774,6225,7250,14160,20843,25158,26442,
#Partially deleted in new
chr1	222564077	222589788	chr1:222564077-222589788	0	-	222564077	222564077	8553170	8	48,159,131,199,67,170,123,62,	0,5432,6457,13367,15681,20050,24365,25649,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	222568828	222570563	chr1:222568828-222570563	0	-	222568828	222568828	8553170	3	596,159,29,	0,681,1706,
#Partially deleted in new
chr1	222569536	222589886	chr1:222569536-222589886	0	-	222569536	222569536	8553170	7	132,131,199,132,170,123,160,	0,998,7908,10222,14591,18906,20190,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	222589824	222592486	chr1:222589824-222592486	0	+	222589824	222589824	8553170	2	138,321,	0,2341,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	222589930	222592733	chr1:222589930-222592733	1	+	222589930	222589930	789624	3	32,150,568,	0,327,2235,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	222589961	222593032	chr1:222589961-222593032	3	+	222589961	222589961	789624	2	446,867,	0,2204,
#Partially deleted in new
chr1	222618085	222668012	chr1:222618085-222668012	3	+	222618110	222665619	0	28	158,134,87,2815,162,146,132,22,89,78,111,72,105,123,112,56,91,139,102,61,36,68,101,138,69,80,151,2704,	0,3073,6682,9489,14079,15018,27468,30743,32206,32548,32707,33891,34142,34922,35142,36157,36303,36569,40636,41367,41536,41648,41820,42091,43970,44167,45912,47223,
#Partially deleted in new
chr1	222618098	222646135	chr1:222618098-222646135	0	+	222618098	222618098	8553170	7	145,134,87,2815,162,146,582,	0,3060,6669,9476,14066,15005,27455,
#Partially deleted in new
chr1	222618107	222666147	chr1:222618107-222666147	1	+	222618110	222665627	0	5	136,134,87,1120,549,	0,3051,6660,9467,47491,
#Partially deleted in new
chr1	222628473	222654661	chr1:222628473-222654661	0	+	222628473	222654661	789624	13	1916,162,146,132,22,89,78,111,123,112,56,91,7,	0,3691,4630,17080,20355,21818,22160,22319,24534,24754,25769,25915,26181,
#Deleted in new
chr1	222641413	222641858	chr1:222641413-222641858	7	-	222641413	222641413	16724991	1	445,	0,
#Partially deleted in new
chr1	222644302	222665823	chr1:222644302-222665823	1	+	222644475	222665619	0	23	284,132,22,89,78,111,72,105,123,112,56,91,139,102,61,36,68,101,138,69,80,151,515,	0,1251,4526,5989,6331,6490,7674,7925,8705,8925,9940,10086,10352,14419,15150,15319,15431,15603,15874,17753,17950,19695,21006,
#Partially deleted in new
chr1	222644393	222652283	chr1:222644393-222652283	0	+	222644393	222644393	8553170	7	193,132,89,78,111,72,56,	0,1160,5898,6240,6399,7583,7834,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	222649262	222650315	chr1:222649262-222650315	0	+	222649262	222649262	8553170	2	529,24,	0,1029,
#Deleted in new
chr1	222658641	222659993	chr1:222658641-222659993	0	+	222658641	222658641	8553170	5	182,61,36,68,88,	0,811,980,1092,1264,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	222658866	222661512	chr1:222658866-222661512	3	-	222658866	222658866	8553170	1	2646,	0,
#Partially deleted in new
chr1	222659938	222664050	chr1:222659938-222664050	0	+	222659938	222659938	8553170	6	68,138,69,80,144,53,	0,238,2117,2314,2949,4059,
#Deleted in new
chr1	222662082	222662508	chr1:222662082-222662508	0	+	222662082	222662082	8553170	2	42,256,	0,170,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	222662089	222665221	chr1:222662089-222665221	0	+	222662089	222664938	789624	4	35,80,151,339,	0,163,1908,2793,
#Partially deleted in new
chr1	222663970	222665531	chr1:222663970-222665531	0	+	222663970	222663970	8553170	2	178,223,	0,1338,
#Partially deleted in new
chr1	222668012	222712524	chr1:222668012-222712524	3	-	222669892	222712317	789624	10	1977,118,123,123,107,64,55,54,70,317,	0,2120,5300,8083,18917,19582,25776,26197,35135,44195,
#Partially deleted in new
chr1	222668012	222712737	chr1:222668012-222712737	0	-	222668012	222668012	8553170	10	1977,118,123,123,107,64,55,54,70,1359,	0,2120,5300,8083,18917,19582,25776,26197,35135,43366,
#Partially deleted in new
chr1	222669398	222676218	chr1:222669398-222676218	0	-	222669398	222669398	8553170	3	591,123,123,	0,3914,6697,
#Partially deleted in new
chr1	222669606	222712428	chr1:222669606-222712428	1	-	222669892	222712317	789624	8	383,118,107,64,55,54,70,221,	0,526,17323,17988,24182,24603,33541,42601,
#Partially deleted in new
chr1	222670189	222712263	chr1:222670189-222712263	0	-	222670189	222670189	8553170	10	61,123,123,107,64,55,54,70,167,56,	0,3123,5906,16740,17405,23599,24020,32958,41189,42018,
#Partially deleted in new
chr1	222673373	222713210	chr1:222673373-222713210	0	-	222673373	222673373	8553170	8	62,123,107,64,55,54,70,182,	0,2722,13556,14221,20415,20836,29774,39655,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	222712552	222735196	chr1:222712552-222735196	3	+	222715699	222732714	0	13	390,117,107,97,96,73,106,90,86,82,151,160,2569,	0,3131,6372,6710,9866,11539,12897,14615,16190,17067,17474,18804,20075,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	222712552	222735196	chr1:222712552-222735196	1	+	222715699	222732714	0	12	390,117,107,97,73,106,90,86,82,151,160,2569,	0,3131,6372,6710,11539,12897,14615,16190,17067,17474,18804,20075,
#Deleted in new
chr1	222712558	222713985	chr1:222712558-222713985	0	+	222712558	222712558	789624	2	384,398,	0,1029,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	222713320	222735196	chr1:222713320-222735196	1	+	222715699	222732655	789624	12	96,117,107,97,96,73,106,90,86,82,151,2569,	0,2363,5604,5942,9098,10771,12129,13847,15422,16299,16706,19307,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	222713320	222735196	chr1:222713320-222735196	1	+	222715699	222732714	0	12	96,117,107,97,73,106,90,86,82,151,160,2569,	0,2363,5604,5942,10771,12129,13847,15422,16299,16706,18036,19307,
#Partially deleted in new
chr1	222713368	222727232	chr1:222713368-222727232	0	+	222715699	222727232	789624	8	48,117,107,97,96,73,106,65,	0,2315,5556,5894,9050,10723,12081,13799,
#Partially deleted in new
chr1	222713375	222725537	chr1:222713375-222725537	0	+	222713375	222713375	8553170	6	41,117,107,97,65,88,	0,2308,5549,5887,10724,12074,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	222713380	222719313	chr1:222713380-222719313	0	+	222713380	222713380	8553170	6	36,125,117,237,107,51,	0,1764,2303,4477,5544,5882,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	222713400	222727209	chr1:222713400-222727209	0	+	222713400	222713400	8553170	7	16,125,107,97,73,106,42,	0,1744,5524,5862,10691,12049,13767,
#Partially deleted in new
chr1	222737206	222749524	chr1:222737206-222749524	0	+	222746545	222749524	789624	5	32,118,189,67,60,	0,697,9324,9808,12258,
#Partially deleted in new
chr1	222737215	222750805	chr1:222737215-222750805	0	+	222746545	222749082	789624	6	107,144,189,67,602,885,	0,662,9315,9799,11745,12705,
#Partially deleted in new
chr1	222737306	222750196	chr1:222737306-222750196	3	+	222746545	222750058	789624	6	16,118,189,67,98,276,	0,597,9224,9708,12158,12614,
#Partially deleted in new
chr1	222739683	222749521	chr1:222739683-222749521	0	+	222746545	222749521	789624	5	149,83,189,67,57,	0,2853,6847,7331,9781,
#Partially deleted in new
chr1	222739683	222747447	chr1:222739683-222747447	0	+	222739683	222739683	8553170	2	149,433,	0,7331,
#Deleted in new
chr1	222746528	222750660	chr1:222746528-222750660	1	+	222746545	222750058	789624	4	191,67,98,740,	0,486,2936,3392,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	222815021	222837384	chr1:222815021-222837384	0	+	222815021	222815021	8553170	3	57,97,389,	0,20097,21974,
#Partially deleted in new
chr1	222815036	222837339	chr1:222815036-222837339	0	+	222815036	222815036	8553170	3	42,97,417,	0,20082,21886,
#Partially deleted in new
chr1	222815046	222837229	chr1:222815046-222837229	0	+	222815046	222815046	8553170	5	32,174,97,71,11,	0,12381,20072,21949,22172,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	222815050	222837384	chr1:222815050-222837384	0	+	222815050	222815050	8553170	4	28,97,71,166,	0,20068,21945,22168,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	222815058	222837382	chr1:222815058-222837382	3	+	222815058	222815058	8553170	5	20,90,174,97,387,	0,8797,12369,20060,21937,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	222815060	222837384	chr1:222815060-222837384	0	+	222815060	222815060	8553170	3	18,97,462,	0,20058,21862,
#Partially deleted in new
chr1	222815074	222827311	chr1:222815074-222827311	0	+	222815074	222815074	8553170	2	97,33,	0,12204,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	222815077	222837383	chr1:222815077-222837383	0	+	222815077	222815077	8553170	5	94,90,97,71,165,	0,8778,20041,21918,22141,
#Partially deleted in new
chr1	222815110	222827582	chr1:222815110-222827582	0	+	222815110	222815110	8553170	2	61,155,	0,12317,
#Partially deleted in new
chr1	222815128	222837300	chr1:222815128-222837300	0	+	222815128	222815128	8553170	3	43,97,305,	0,19990,21867,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	222823883	222837384	chr1:222823883-222837384	0	+	222823883	222823883	8553170	3	62,97,389,	0,11235,13112,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	222830979	222837384	chr1:222830979-222837384	0	+	222830979	222830979	8553170	3	63,97,389,	0,4139,6016,
#Partially deleted in new
chr1	222928423	223005995	chr1:222928423-223005995	3	+	222942823	223005972	789624	8	147,526,30,124,128,98,98,3611,	0,14383,54656,62201,63096,63589,66461,73961,
#Partially deleted in new
chr1	222928440	222943550	chr1:222928440-222943550	0	+	222928440	222928440	8553170	2	130,744,	0,14366,
#Deleted in new
chr1	222945724	222945900	chr1:222945724-222945900	7	+	222945724	222945724	16724991	1	176,	0,
#Partially deleted in new
chr1	223109405	223137287	chr1:223109405-223137287	1	-	223110454	223113031	789624	4	3630,165,183,110,	0,23069,25276,27772,
#Partially deleted in new
chr1	223112967	223143238	chr1:223112967-223143238	0	-	223112967	223113031	789624	4	68,165,183,43,	0,19507,21714,30228,
#Partially deleted in new
chr1	223123487	223132579	chr1:223123487-223132579	0	-	223123487	223123487	8553170	2	405,105,	0,8987,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	223126857	223143248	chr1:223126857-223143248	0	-	223126857	223126857	8553170	6	2709,165,94,183,86,53,	0,5617,7531,7824,10320,16338,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	223141381	223143248	chr1:223141381-223143248	0	-	223141381	223141381	8553170	2	382,53,	0,1814,
#Deleted in new
chr1	223144048	223144954	chr1:223144048-223144954	3	+	223144048	223144048	8553170	2	195,418,	0,488,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	223181143	223188154	chr1:223181143-223188154	3	+	223181143	223181143	8553170	3	149,118,220,	0,5687,6791,
#Partially deleted in new
chr1	223220818	223364059	chr1:223220818-223364059	1	-	223222191	223363425	789624	8	1402,383,145,192,189,174,213,782,	0,2430,6775,8378,43811,47683,71620,142459,
#Partially deleted in new
chr1	223220820	223364202	chr1:223220820-223364202	3	-	223222191	223363425	789624	9	1400,383,145,192,189,174,213,183,146,	0,2428,6773,8376,43809,47681,71618,142457,143236,
#Partially deleted in new
chr1	223220830	223364130	chr1:223220830-223364130	1	-	223222191	223363425	789624	8	1390,383,145,198,189,174,183,74,	0,2418,6763,8366,43799,47671,142447,143226,
#Partially deleted in new
chr1	223220830	223364178	chr1:223220830-223364178	1	-	223221039	223363425	789624	9	250,365,145,192,189,174,213,183,122,	0,2436,6763,8366,43799,47671,71608,142447,143226,
#Partially deleted in new
chr1	223221016	223363337	chr1:223221016-223363337	0	-	223222191	223363337	789624	8	1204,383,145,198,189,174,213,60,	0,2232,6577,8180,43613,47485,71422,142261,
#Deleted in new
chr1	223227602	223229450	chr1:223227602-223229450	0	-	223227602	223227602	8553170	2	136,254,	0,1594,
#Deleted in new
chr1	223227614	223230747	chr1:223227614-223230747	0	-	223227614	223227614	8553170	3	124,192,210,	0,1582,2923,
#Partially deleted in new
chr1	223234914	223364167	chr1:223234914-223364167	1	-	223234951	223363425	789624	6	186,189,174,213,183,111,	0,29715,33587,57524,128363,129142,
#Partially deleted in new
chr1	223264406	223292569	chr1:223264406-223292569	0	-	223264406	223264406	8553170	3	412,174,131,	0,4095,28032,
#Partially deleted in new
chr1	223358824	223363855	chr1:223358824-223363855	0	-	223358824	223358824	8553170	4	297,109,183,138,	0,1378,4453,4893,
#Deleted in new
chr1	223373821	223373956	chr1:223373821-223373956	3	+	223373821	223373821	8553170	1	135,	0,
#Deleted in new
chr1	223393416	223395470	chr1:223393416-223395470	3	+	223393475	223395347	789624	1	2054,	0,
#Partially deleted in new
chr1	223541608	223665734	chr1:223541608-223665734	3	-	223541835	223665646	789624	21	251,59,117,79,69,65,58,69,37,212,12,176,161,75,86,84,169,134,119,70,325,	0,1499,2458,3163,3622,7709,9351,12223,16522,67544,70637,74361,77684,78583,81206,84196,85380,86400,87053,112721,123801,
#Partially deleted in new
chr1	223541611	223551017	chr1:223541611-223551017	0	-	223541835	223551017	789624	7	248,59,117,79,69,65,58,	0,1496,2455,3160,3619,7706,9348,
#Deleted in new
chr1	223541615	223545374	chr1:223541615-223545374	0	-	223541615	223541615	8553170	4	244,59,117,603,	0,1492,2451,3156,
#Deleted in new
chr1	223541647	223544270	chr1:223541647-223544270	0	-	223541647	223541647	8553170	3	212,59,204,	0,1460,2419,
#Partially deleted in new
chr1	223615969	223665734	chr1:223615969-223665734	0	-	223615969	223665646	789624	10	176,161,75,86,84,169,134,119,70,325,	0,3323,4222,6845,9835,11019,12039,12692,38360,49440,
#Partially deleted in new
chr1	223616897	223665723	chr1:223616897-223665723	1	-	223618270	223665646	789624	10	1384,161,75,86,84,169,134,119,70,314,	0,2395,3294,5917,8907,10091,11111,11764,37432,48512,
#Partially deleted in new
chr1	223620195	223654399	chr1:223620195-223654399	0	-	223642786	223654399	789624	8	71,86,84,169,134,119,151,70,	0,2619,5609,6793,7813,8466,22487,34134,
#Partially deleted in new
chr1	223622621	223628705	chr1:223622621-223628705	0	-	223622810	223628705	789624	5	279,84,169,134,44,	0,3183,4367,5387,6040,
#Deleted in new
chr1	223627039	223628970	chr1:223627039-223628970	0	-	223627039	223627039	8553170	3	118,134,309,	0,969,1622,
#Deleted in new
chr1	223644109	223644383	chr1:223644109-223644383	7	-	223644109	223644109	16724991	1	274,	0,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr1	223701592	223776016	chr1:223701592-223776016	1	+	223701828	223774857	0	21	239,70,119,134,169,84,86,75,161,170,12,212,37,66,58,65,69,79,117,59,1183,	0,16169,42507,43713,45404,47446,49297,50404,51203,53887,55776,57677,59988,60593,62557,64774,68248,68854,70216,70588,73241,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	223701644	223747063	chr1:223701644-223747063	0	+	223701828	223747063	789624	5	187,70,119,134,67,	0,16117,42455,43661,45352,
#Partially deleted in new
chr1	223712331	223776018	chr1:223712331-223776018	3	+	223712640	223774857	0	21	546,70,119,134,169,84,86,75,161,170,12,212,37,66,58,65,69,79,117,59,1185,	0,5430,31768,32974,34665,36707,38558,39665,40464,43148,45037,46938,49249,49854,51818,54035,57509,58115,59477,59849,62502,
#Partially deleted in new
chr1	223747107	223749476	chr1:223747107-223749476	0	+	223747107	223747107	8553170	2	58,438,	0,1931,
#Partially deleted in new
chr1	223752018	223757497	chr1:223752018-223757497	0	+	223752018	223752018	8553170	4	53,161,170,129,	0,777,3461,5350,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	223757623	223776018	chr1:223757623-223776018	0	+	223757623	223757623	8553170	9	1858,37,66,58,65,685,117,59,1185,	0,3957,4562,6526,8743,12217,14185,14557,17210,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	223758225	223776018	chr1:223758225-223776018	0	+	223758225	223758225	8553170	10	1256,37,66,58,65,69,79,117,59,1185,	0,3355,3960,5924,8141,11615,12221,13583,13955,16608,
#Partially deleted in new
chr1	223759433	223764207	chr1:223759433-223764207	0	+	223759433	223759433	8553170	4	48,159,66,58,	0,2147,2752,4716,
#Deleted in new
chr1	223769840	223772710	chr1:223769840-223772710	0	+	223769840	223769840	8553170	5	69,79,117,59,301,	0,606,1968,2340,2569,
#Deleted in new
chr1	223770314	223773257	chr1:223770314-223773257	0	+	223770314	223770314	8553170	3	211,117,1077,	0,1494,1866,
#Deleted in new
chr1	223770412	223772710	chr1:223770412-223772710	0	+	223770412	223770412	8553170	4	113,117,59,301,	0,1396,1768,1997,
#Partially deleted in new
chr1	223770622	223776018	chr1:223770622-223776018	0	+	223770622	223770622	8553170	3	1303,59,1185,	0,1558,4211,
#Partially deleted in new
chr1	223779898	223845972	chr1:223779898-223845972	3	-	223780852	223845680	789624	18	996,200,167,134,138,776,463,149,111,229,165,182,175,102,83,114,148,319,	0,4216,9109,12490,13404,15916,18316,20000,20801,22217,22832,23372,24275,26947,30532,34341,41321,65755,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	223779898	223845930	chr1:223779898-223845930	1	-	223780852	223806932	789624	19	996,200,167,134,138,776,463,149,111,229,165,182,175,102,83,114,132,148,277,	0,4216,9109,12490,13404,15916,18316,20000,20801,22217,22832,23372,24275,26947,30532,34341,38307,41321,65755,
#Partially deleted in new
chr1	223780644	223800726	chr1:223780644-223800726	0	-	223796572	223800726	789624	8	250,200,167,134,138,776,149,27,	0,3470,8363,11744,12658,15170,19254,20055,
#Partially deleted in new
chr1	223780788	223802736	chr1:223780788-223802736	0	-	223780788	223780788	8553170	11	106,200,167,134,138,776,463,149,111,229,308,	0,3326,8219,11600,12514,15026,17426,19110,19911,21327,21640,
#Partially deleted in new
chr1	223795837	223814328	chr1:223795837-223814328	0	-	223795837	223814328	789624	5	286,141,102,83,89,	0,8370,11008,14593,18402,
#Partially deleted in new
chr1	223796173	223800726	chr1:223796173-223800726	0	-	223796572	223800726	789624	3	417,149,27,	0,3725,4526,
#Partially deleted in new
chr1	223799916	223802731	chr1:223799916-223802731	0	-	223799916	223799916	8553170	4	131,111,229,62,	0,783,2199,2753,
#Deleted in new
chr1	223800775	223802657	chr1:223800775-223802657	0	-	223800775	223800775	8553170	2	35,542,	0,1340,
#Deleted in new
chr1	223801938	223803330	chr1:223801938-223803330	0	-	223801938	223801938	8553170	3	406,165,60,	0,792,1332,
#Deleted in new
chr1	223802300	223803223	chr1:223802300-223803223	0	-	223802300	223802300	8553170	2	44,493,	0,430,
#Partially deleted in new
chr1	223804234	223821136	chr1:223804234-223821136	0	-	223804234	223804234	8553170	5	114,102,83,114,68,	0,2611,6196,10005,16834,
#Partially deleted in new
chr1	223806910	223826069	chr1:223806910-223826069	0	-	223806910	223806910	8553170	5	37,83,114,148,185,	0,3520,7329,14309,18974,
#Partially deleted in new
chr1	223810463	223845954	chr1:223810463-223845954	0	-	223810510	223845680	789624	3	50,114,301,	0,3776,35190,
#Partially deleted in new
chr1	223814175	223845794	chr1:223814175-223845794	0	-	223814175	223814175	8553170	3	178,148,141,	0,7044,31478,
#Deleted in new
chr1	223856578	223857387	chr1:223856578-223857387	7	-	223856578	223856578	16724991	1	809,	0,
#Partially deleted in new
chr1	223863725	223864851	chr1:223863725-223864851	7	-	223863725	223863725	16724991	1	1126,	0,
#Deleted in new
chr1	223947604	223950416	chr1:223947604-223950416	7	+	223947604	223947604	16724991	3	1762,294,159,	0,1916,2653,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	223951393	223953439	chr1:223951393-223953439	5	-	223951393	223951393	16724991	1	2046,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	223951478	223992594	chr1:223951478-223992594	7	-	223951478	223951478	16724991	13	813,58,191,119,169,197,65,236,528,59,66,110,355,	0,906,2998,3940,9585,10598,22503,25401,31279,32903,35096,36566,40761,
#Deleted in new
chr1	223976145	223976249	chr1:223976145-223976249	3	-	223976145	223976145	8553170	1	104,	0,
#Partially deleted in new
chr1	223982753	223988154	chr1:223982753-223988154	5	-	223982753	223982753	16724991	4	89,95,66,110,	0,437,3821,5291,
#Partially deleted in new
chr1	223992742	224004789	chr1:223992742-224004789	7	+	223992742	223992742	16724991	4	305,101,135,83,	0,9779,10777,11964,
#Partially deleted in new
chr1	223992763	224004792	chr1:223992763-224004792	4	+	223992763	223992763	16724991	3	284,135,68,	0,10756,11961,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	223994261	223995196	chr1:223994261-223995196	3	+	223994261	223994261	8553170	2	88,485,	0,450,
#Partially deleted in new
chr1	223995894	224003654	chr1:223995894-224003654	5	+	223995894	223995894	16724991	3	107,101,135,	0,6627,7625,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	223995956	224009703	chr1:223995956-224009703	4	+	223995956	223995956	16724991	4	138,101,135,384,	0,6565,7563,13363,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	224001906	224010116	chr1:224001906-224010116	4	+	224001906	224001906	16724991	3	1748,124,797,	0,5387,7413,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	224008726	224010612	chr1:224008726-224010612	5	+	224008726	224008726	16724991	1	1886,	0,
#Partially deleted in new
chr1	224030703	224035056	chr1:224030703-224035056	7	-	224030703	224030703	16724991	3	93,50,103,	0,2769,4250,
#Deleted in new
chr1	224107281	224107541	chr1:224107281-224107541	3	-	224107281	224107281	8553170	1	260,	0,
#Partially deleted in new
chr1	224114086	224162047	chr1:224114086-224162047	3	+	224114129	224157746	789624	5	310,110,139,196,4696,	0,16385,19987,39055,43265,
#Partially deleted in new
chr1	224114110	224158150	chr1:224114110-224158150	1	+	224114129	224157375	789624	4	286,110,139,799,	0,16361,19963,43241,
#Partially deleted in new
chr1	224114118	224158182	chr1:224114118-224158182	0	+	224114129	224153145	789624	4	278,110,196,831,	0,16353,39023,43233,
#Partially deleted in new
chr1	224114170	224134365	chr1:224114170-224134365	0	+	224114170	224114170	8553170	3	226,110,292,	0,16301,19903,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	224114217	224131021	chr1:224114217-224131021	0	+	224114217	224114217	8553170	2	179,550,	0,16254,
#Deleted in new
chr1	224175475	224175706	chr1:224175475-224175706	7	-	224175475	224175475	16724991	1	231,	0,
#Partially deleted in new
chr1	224175755	224192353	chr1:224175755-224192353	0	+	224175928	224192353	789624	3	192,743,22,	0,13821,16576,
#Deleted in new
chr1	224179640	224179767	chr1:224179640-224179767	3	+	224179640	224179640	8553170	1	127,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	224183170	224193441	chr1:224183170-224193441	3	+	224183336	224192478	789624	3	248,743,1110,	0,6406,9161,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	224183265	224193157	chr1:224183265-224193157	1	+	224183336	224192478	789624	4	153,743,187,262,	0,6311,9066,9630,
#Partially deleted in new
chr1	224183674	224190052	chr1:224183674-224190052	0	+	224183674	224183674	8553170	2	157,476,	0,5902,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	224190135	224192440	chr1:224190135-224192440	0	+	224190135	224190135	8553170	3	184,65,109,	0,956,2196,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	224208746	224213279	chr1:224208746-224213279	3	-	224208746	224208746	789624	2	265,525,	0,4008,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	224208746	224210412	chr1:224208746-224210412	0	-	224208746	224208746	8553170	2	265,172,	0,1494,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	224219612	224228043	chr1:224219612-224228043	3	+	224219612	224219612	789624	3	290,415,618,	0,3801,7813,
#Partially deleted in new
chr1	224227333	224330387	chr1:224227333-224330387	3	-	224227625	224330127	0	23	337,71,89,77,107,100,120,63,105,219,250,145,118,102,135,77,133,273,58,100,53,74,317,	0,3892,5867,9172,22878,40700,48005,53789,58692,60441,62150,66933,69167,73228,76389,77402,77700,80657,84466,90360,90544,99057,102737,
#Partially deleted in new
chr1	224227333	224330170	chr1:224227333-224330170	1	-	224227625	224311823	0	22	337,71,89,77,107,100,120,63,105,219,250,145,118,102,135,77,133,273,58,100,53,100,	0,3892,5867,9172,22878,40700,48005,53789,58692,60441,62150,66933,69167,73228,76389,77402,77700,80657,84466,90360,90544,102737,
#Partially deleted in new
chr1	224227333	224330121	chr1:224227333-224330121	1	-	224227625	224311823	0	21	337,71,89,77,107,100,120,63,105,219,250,145,118,102,135,77,133,58,100,53,51,	0,3892,5867,9172,22878,40700,48005,53789,58692,60441,62150,66933,69167,73228,76389,77402,77700,84466,90360,90544,102737,
#Partially deleted in new
chr1	224227333	224236582	chr1:224227333-224236582	0	-	224227333	224227333	8553170	5	337,71,78,89,77,	0,3892,5561,5867,9172,
#Partially deleted in new
chr1	224227333	224268133	chr1:224227333-224268133	0	-	224227333	224227333	8553170	5	337,71,77,107,100,	0,3892,9172,22878,40700,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	224227333	224236647	chr1:224227333-224236647	0	-	224227333	224227333	8553170	4	337,71,89,142,	0,3892,5867,9172,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr1	224227336	224330189	chr1:224227336-224330189	1	-	224227625	224305133	0	24	334,71,89,77,107,100,120,63,105,219,250,145,118,102,81,135,77,133,273,58,100,53,74,119,	0,3889,5864,9169,22875,40697,48002,53786,58689,60438,62147,66930,69164,73225,74354,76386,77399,77697,80654,84463,90357,90541,99054,102734,
#Partially deleted in new
chr1	224227368	224330138	chr1:224227368-224330138	1	-	224227625	224330127	0	22	302,71,89,77,107,100,120,63,105,219,250,145,118,102,135,77,133,58,100,53,74,68,	0,3857,5832,9137,22843,40665,47970,53754,58657,60406,62115,66898,69132,73193,76354,77367,77665,84431,90325,90509,99022,102702,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr1	224227453	224330139	chr1:224227453-224330139	1	-	224227625	224305133	0	21	217,71,89,77,107,100,120,63,105,219,250,145,118,102,81,135,77,133,100,53,69,	0,3772,5747,9052,22758,40580,47885,53669,58572,60321,62030,66813,69047,73108,74237,76269,77282,77580,90240,90424,102617,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	224231265	224269915	chr1:224231265-224269915	0	-	224231265	224231265	8553170	6	31,89,77,107,100,184,	0,1935,5240,18946,36768,38466,
#Deleted in new
chr1	224257003	224257141	chr1:224257003-224257141	3	-	224257003	224257003	5263520	1	138,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	224289184	224294341	chr1:224289184-224294341	0	-	224289184	224289184	8553170	2	549,75,	0,5082,
#Partially deleted in new
chr1	224289681	224330137	chr1:224289681-224330137	0	-	224300655	224330127	789624	12	52,145,118,102,135,133,273,58,100,53,74,67,	0,4585,6819,10880,14041,15352,18309,22118,28012,28196,36709,40389,
#Partially deleted in new
chr1	224297645	224298600	chr1:224297645-224298600	7	+	224297645	224297645	16724991	2	120,354,	0,601,
#Partially deleted in new
chr1	224304734	224330138	chr1:224304734-224330138	0	-	224304734	224330127	789624	7	78,133,58,100,53,74,68,	0,299,7065,12959,13143,21656,25336,
#Partially deleted in new
chr1	224304734	224330139	chr1:224304734-224330139	0	-	224304734	224330127	789624	4	78,133,273,69,	0,299,3256,25336,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	224305379	224305483	chr1:224305379-224305483	3	+	224305379	224305379	8553170	1	104,	0,
#Partially deleted in new
chr1	224307985	224330187	chr1:224307985-224330187	0	-	224307985	224307985	8553170	4	278,100,53,117,	0,9708,9892,22085,
#Partially deleted in new
chr1	224308007	224312124	chr1:224308007-224312124	0	-	224308007	224308007	8553170	2	256,325,	0,3792,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	224312539	224330148	chr1:224312539-224330148	0	-	224312539	224312539	8553170	5	616,100,53,74,78,	0,5154,5338,13851,17531,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	224312726	224330132	chr1:224312726-224330132	0	-	224312726	224312726	8553170	4	425,100,53,62,	0,4967,5151,17344,
#Partially deleted in new
chr1	224317693	224330172	chr1:224317693-224330172	0	-	224317693	224317693	8553170	3	93,53,102,	0,184,12377,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	224356849	224379452	chr1:224356849-224379452	3	+	224356924	224375822	789624	5	144,69,113,141,3658,	0,3645,9029,14433,18945,
#Partially deleted in new
chr1	224356857	224379452	chr1:224356857-224379452	1	+	224356924	224379090	789624	4	136,69,113,384,	0,3637,9021,22211,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	224356870	224379452	chr1:224356870-224379452	1	+	224356924	224375822	789624	4	123,69,113,3658,	0,3624,9008,18924,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	224356886	224375998	chr1:224356886-224375998	0	+	224356886	224356886	8553170	5	107,347,113,141,204,	0,7222,8992,14396,18908,
#Partially deleted in new
chr1	224356887	224376884	chr1:224356887-224376884	0	+	224356887	224356887	789624	4	181,113,141,1090,	0,8991,14395,18907,
#Partially deleted in new
chr1	224356892	224379452	chr1:224356892-224379452	1	+	224356924	224379090	789624	5	101,69,113,141,384,	0,3602,8986,14390,22176,
#Partially deleted in new
chr1	224356920	224371297	chr1:224356920-224371297	0	+	224356920	224356920	8553170	3	692,113,15,	0,8958,14362,
#Partially deleted in new
chr1	224377050	224379459	chr1:224377050-224379459	0	+	224377050	224377050	8553170	2	127,391,	0,2018,
#Partially deleted in new
chr1	224385142	224434794	chr1:224385142-224434794	3	-	224389834	224434105	789624	14	4718,186,130,79,146,120,141,139,157,98,137,105,100,1111,	0,8685,12954,13372,13746,15807,19287,26284,33117,34375,39375,46334,46539,48541,
#Partially deleted in new
chr1	224385665	224411484	chr1:224385665-224411484	0	-	224389834	224411484	789624	9	837,28,186,130,79,146,120,141,58,	0,4167,8162,12431,12849,13223,15284,18764,25761,
#Partially deleted in new
chr1	224389135	224434081	chr1:224389135-224434081	0	-	224424647	224434081	789624	16	725,186,130,79,146,120,106,141,139,83,157,98,202,57,100,398,	0,4692,8961,9379,9753,11814,12868,15294,22291,24117,29124,30382,35382,42389,42546,44548,
#Partially deleted in new
chr1	224397726	224401019	chr1:224397726-224401019	0	-	224397726	224397726	8553170	4	500,79,146,70,	0,788,1162,3223,
#Deleted in new
chr1	224398226	224398311	chr1:224398226-224398311	3	-	224398226	224398226	5263520	1	85,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	224412908	224434013	chr1:224412908-224434013	0	-	224412908	224412908	8553170	7	427,157,98,137,57,100,330,	0,5351,6609,11609,18616,18773,20775,
#Partially deleted in new
chr1	224419444	224433856	chr1:224419444-224433856	0	-	224419444	224419444	8553170	5	171,202,105,100,173,	0,5073,12032,12237,14239,
#Partially deleted in new
chr1	224419548	224433838	chr1:224419548-224433838	0	-	224419548	224419548	8553170	4	67,202,105,155,	0,4969,11928,14135,
#Partially deleted in new
chr1	224419561	224437033	chr1:224419561-224437033	0	-	224419561	224431762	789624	6	54,137,105,100,175,213,	0,4956,11915,12120,16155,17259,
#Deleted in new
chr1	224429296	224433850	chr1:224429296-224433850	0	-	224429296	224429296	8553170	3	2285,100,167,	0,2385,4387,
#Partially deleted in new
chr1	224434659	224588616	chr1:224434659-224588616	0	+	224434659	224434659	8553170	6	203,136,111,66,104,256,	0,81081,112169,131539,148504,153701,
#Partially deleted in new
chr1	224434911	224521555	chr1:224434911-224521555	0	+	224434911	224434911	8553170	3	276,136,556,	0,80829,86088,
#Partially deleted in new
chr1	224434924	224521222	chr1:224434924-224521222	0	+	224434924	224434924	8553170	4	263,156,136,223,	0,78856,80816,86075,
#Partially deleted in new
chr1	224513687	224521221	chr1:224513687-224521221	0	+	224513687	224513687	8553170	3	93,136,222,	0,2053,7312,
#Partially deleted in new
chr1	224515861	224536981	chr1:224515861-224536981	0	+	224515861	224515861	8553170	3	15,328,46,	0,5138,21074,
#Partially deleted in new
chr1	224529190	224739621	chr1:224529190-224739621	0	+	224529190	224529190	8553170	6	230,69,48,113,144,293,	0,151767,155605,201271,205372,210138,
#Partially deleted in new
chr1	224529195	224739337	chr1:224529195-224739337	0	+	224529195	224529195	8553170	8	225,111,66,69,48,113,144,9,	0,17633,37003,151762,155600,201266,205367,210133,
#Partially deleted in new
chr1	224529217	224734706	chr1:224529217-224734706	0	+	224529217	224529217	8553170	7	203,66,104,69,48,113,144,	0,36981,53946,151740,155578,201244,205345,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	224529221	224537582	chr1:224529221-224537582	0	+	224529221	224529221	8553170	2	199,647,	0,7714,
#Partially deleted in new
chr1	224529222	224588492	chr1:224529222-224588492	0	+	224529222	224529222	8553170	6	198,111,66,104,255,132,	0,17606,36976,53941,57943,59138,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	224529309	224681026	chr1:224529309-224681026	0	+	224529309	224529309	8553170	6	111,111,66,131,124,69,	0,17519,36889,132003,135444,151648,
#Partially deleted in new
chr1	224565364	224588555	chr1:224565364-224588555	0	+	224565364	224565364	8553170	4	458,66,104,195,	0,834,17799,22996,
#Deleted in new
chr1	224574433	224575389	chr1:224574433-224575389	7	+	224574433	224574433	16724991	1	956,	0,
#Partially deleted in new
chr1	224587139	224588604	chr1:224587139-224588604	0	+	224587139	224587139	8553170	2	281,244,	0,1221,
#Partially deleted in new
chr1	224611403	224616220	chr1:224611403-224616220	3	-	224611403	224611403	8553170	4	189,224,125,146,	0,3800,4208,4671,
#Partially deleted in new
chr1	224616292	224740549	chr1:224616292-224740549	3	+	224617174	224739356	789624	6	963,69,48,113,144,1221,	0,64665,68503,114169,118270,123036,
#Partially deleted in new
chr1	224661172	224661886	chr1:224661172-224661886	7	-	224661172	224661172	16724991	1	714,	0,
#Partially deleted in new
chr1	224717503	224730662	chr1:224717503-224730662	3	-	224717503	224717503	8553170	3	307,165,365,	0,1440,12794,
#Partially deleted in new
chr1	224766899	224773341	chr1:224766899-224773341	3	+	224766899	224766899	8553170	2	254,169,	0,6273,
#Boundary problem: need 61, got 0, diff 61, mapped 0.0
chr1	224896261	225399269	chr1:224896261-225399269	1	+	224896261	225399269	789624	61	104,99,320,85,140,131,153,132,251,130,280,167,234,342,370,113,254,232,191,187,77,172,90,135,216,91,209,253,79,230,117,188,129,132,198,162,192,182,109,126,95,160,132,96,231,29,245,419,199,237,100,103,157,181,164,197,113,140,161,147,216,	0,27015,33254,56433,58697,68217,71169,111151,127353,142432,146573,153948,155189,182945,184117,189415,244506,248135,255621,256435,257488,263052,271677,289029,296434,307921,309709,310706,334811,344331,356039,368920,370379,374473,393623,404607,406894,408646,411199,412023,422321,426402,427960,428475,441004,441997,444195,449700,450194,455385,457912,461506,462234,480994,483897,485121,492117,493472,496029,502258,502792,
#Boundary problem: need 84, got 0, diff 84, mapped 0.0
chr1	224929653	225399269	chr1:224929653-225399269	3	+	224952702	225399269	789624	84	182,110,140,150,131,153,116,63,145,132,251,130,280,46,98,167,345,342,370,191,246,122,172,105,119,75,291,232,54,146,69,187,77,157,90,135,216,91,209,253,79,230,48,117,159,133,65,188,129,132,168,171,198,162,192,182,109,126,95,160,132,96,141,216,231,122,245,419,199,237,86,157,211,103,228,190,181,164,197,113,140,161,147,216,	0,23016,25305,30499,34825,37777,39105,44437,73129,77759,93961,109040,113181,114090,114232,120556,121797,149553,150725,152895,155890,167464,171059,188030,188227,189566,211077,214743,215672,217450,222351,223043,224096,229675,238285,255637,263042,274529,276317,277314,301419,310939,321002,322647,328306,329467,334543,335528,336987,341081,342252,343301,360231,371215,373502,375254,377807,378631,388929,393010,394568,395083,401783,403637,407612,408407,410803,416308,416802,421993,424149,428842,431027,435138,438151,445034,447602,450505,451729,458725,460080,462637,468866,469400,
#Partially deleted in new
chr1	224929660	224967923	chr1:224929660-224967923	1	+	224952702	224967715	789624	7	175,110,140,150,131,153,244,	0,23009,25298,30492,34818,37770,38019,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	224929666	225024289	chr1:224929666-225024289	1	+	224952702	225023869	789624	11	169,110,140,150,131,153,116,63,145,132,675,	0,23003,25292,30486,34812,37764,39092,44424,73116,77746,93948,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	224929681	225024604	chr1:224929681-225024604	1	+	224952702	225023869	789624	11	154,110,140,150,131,84,116,63,145,132,990,	0,22988,25277,30471,34797,37749,39077,44409,73101,77731,93933,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	224929714	224961329	chr1:224929714-224961329	0	+	224929714	224929714	8553170	7	121,110,89,108,140,150,233,	0,22955,23274,24754,25244,30438,31382,
#Partially deleted in new
chr1	224952669	224967924	chr1:224952669-224967924	1	+	224952702	224967715	789624	6	110,140,150,131,153,245,	0,2289,7483,11809,14761,15010,
#Partially deleted in new
chr1	224952695	224967625	chr1:224952695-224967625	0	+	224952695	224952695	8553170	5	84,140,150,131,195,	0,2263,7457,11783,14735,
#Boundary problem: need 83, got 0, diff 83, mapped 0.0
chr1	224952702	225399269	chr1:224952702-225399269	1	+	224952702	225399269	789624	83	77,140,150,131,153,116,63,145,132,251,130,280,46,98,167,345,342,370,191,246,122,172,105,119,75,291,232,54,146,69,187,77,157,90,135,216,91,209,253,79,230,48,117,159,133,65,188,129,132,168,171,198,162,192,182,109,126,95,160,132,96,141,216,231,122,245,419,199,237,86,157,211,103,228,190,181,164,197,113,140,161,147,216,	0,2256,7450,11776,14728,16056,21388,50080,54710,70912,85991,90132,91041,91183,97507,98748,126504,127676,129846,132841,144415,148010,164981,165178,166517,188028,191694,192623,194401,199302,199994,201047,206626,215236,232588,239993,251480,253268,254265,278370,287890,297953,299598,305257,306418,311494,312479,313938,318032,319203,320252,337182,348166,350453,352205,354758,355582,365880,369961,371519,372034,378734,380588,384563,385358,387754,393259,393753,398944,401100,405793,407978,412089,415102,421985,424553,427456,428680,435676,437031,439588,445817,446351,
#Partially deleted in new
chr1	224955038	224967924	chr1:224955038-224967924	0	+	224955038	224967715	789624	4	60,131,153,245,	0,9440,12392,12641,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	224967545	224969493	chr1:224967545-224969493	0	+	224967545	224967545	8553170	2	38,735,	0,1213,
#Deleted in new
chr1	225117683	225118203	chr1:225117683-225118203	0	+	225117683	225118168	789624	2	105,323,	0,197,
#Partially deleted in new
chr1	225117956	225144548	chr1:225117956-225144548	0	+	225117956	225144548	789624	5	43,75,88,254,152,	0,1263,5570,22811,26440,
#Partially deleted in new
chr1	225117970	225145379	chr1:225117970-225145379	0	+	225117970	225144411	789624	5	29,75,88,232,54,	0,1249,5556,26426,27355,
#Boundary problem: need 40, got 0, diff 40, mapped 0.0
chr1	225240793	225398064	chr1:225240793-225398064	0	+	225240793	225358509	789624	40	29,117,159,133,65,188,129,132,171,168,93,198,162,192,182,109,126,95,160,132,96,141,231,122,245,419,199,237,157,211,103,72,198,200,164,197,113,140,161,2342,	0,11507,17166,18327,23403,24388,25847,29941,32161,35120,36616,49091,60075,62362,64114,66667,67491,77789,81870,83428,83943,90643,96472,97267,99663,105168,105662,110853,117702,119887,123998,127011,133894,136443,139365,140589,147585,148940,151497,154929,
#Partially deleted in new
chr1	225240793	225351883	chr1:225240793-225351883	0	+	225240793	225351883	789624	28	29,117,159,133,65,188,129,132,171,168,93,198,162,192,182,109,126,95,160,132,96,141,231,122,245,419,199,237,	0,11507,17166,18327,23403,24388,25847,29941,32161,35120,36616,49091,60075,62362,64114,66667,67491,77789,81870,83428,83943,90643,96472,97267,99663,105168,105662,110853,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	225250662	225270796	chr1:225250662-225270796	0	+	225250662	225270796	789624	8	45,117,159,133,65,188,129,62,	0,1638,7297,8458,13534,14519,15978,20072,
#Partially deleted in new
chr1	225389739	225399292	chr1:225389739-225399292	0	+	225389739	225399269	789624	4	134,161,147,239,	0,2551,8780,9314,
#Partially deleted in new
chr1	225401501	225428035	chr1:225401501-225428035	1	-	225403302	225424075	0	14	1962,123,81,169,126,104,192,55,197,190,84,201,179,82,	0,2902,3124,5162,8789,9835,10952,13776,16482,17761,18213,20575,22409,26452,
#Partially deleted in new
chr1	225401502	225428855	chr1:225401502-225428855	3	-	225403302	225424075	0	14	1961,123,81,169,126,104,192,55,197,190,84,201,179,150,	0,2901,3123,5161,8788,9834,10951,13775,16481,17760,18212,20574,22408,27203,
#Deleted in new
chr1	225403089	225404565	chr1:225403089-225404565	0	-	225403089	225403089	8553170	2	374,162,	0,1314,
#Partially deleted in new
chr1	225406561	225411417	chr1:225406561-225411417	0	-	225406561	225406561	8553170	3	271,126,81,	0,3729,4775,
#Deleted in new
chr1	225417549	225419362	chr1:225417549-225419362	0	-	225417549	225417549	8553170	2	631,100,	0,1713,
#Partially deleted in new
chr1	225419262	225428925	chr1:225419262-225428925	0	-	225419262	225424075	789624	5	190,84,201,179,220,	0,452,2814,4648,9443,
#Partially deleted in new
chr1	225419724	225422427	chr1:225419724-225422427	0	-	225419724	225419724	8553170	2	74,351,	0,2352,
#Deleted in new
chr1	225423920	225427897	chr1:225423920-225427897	0	-	225423920	225424075	789624	2	169,567,	0,3410,
#Partially deleted in new
chr1	225447242	225465343	chr1:225447242-225465343	3	-	225447242	225447242	8553170	2	276,121,	0,17980,
#Partially deleted in new
chr1	225447990	225465283	chr1:225447990-225465283	1	-	225447990	225447990	8553170	2	595,61,	0,17232,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	225465020	225473837	chr1:225465020-225473837	3	+	225465020	225465020	8553170	2	290,269,	0,8548,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	225486834	225653142	chr1:225486834-225653142	3	-	225497774	225652690	0	15	10978,58,79,63,67,49,58,146,305,111,368,85,178,166,457,	0,11512,14157,18156,21116,24976,25822,26036,27761,30361,32363,43719,68071,80414,165851,
#Partially deleted in new
chr1	225495479	225515397	chr1:225495479-225515397	0	-	225495479	225495479	8553170	9	2333,58,79,63,67,49,58,146,802,	0,2867,5512,9511,12471,16331,17177,17391,19116,
#Partially deleted in new
chr1	225496884	225652699	chr1:225496884-225652699	1	-	225497774	225652690	789624	15	928,58,79,67,49,58,146,305,795,368,85,12,178,166,14,	0,1462,4107,11066,14926,15772,15986,17711,20311,22313,33669,34161,58021,70364,155801,
#Partially deleted in new
chr1	225497084	225653045	chr1:225497084-225653045	1	-	225497774	225652690	0	14	728,58,79,67,49,58,146,305,111,368,85,178,166,360,	0,1262,3907,10866,14726,15572,15786,17511,20111,22113,33469,57821,70164,155601,
#Partially deleted in new
chr1	225497422	225501256	chr1:225497422-225501256	0	-	225497422	225497422	8553170	3	390,58,265,	0,924,3569,
#Partially deleted in new
chr1	225497633	225508583	chr1:225497633-225508583	0	-	225497633	225497633	8553170	5	179,58,79,67,195,	0,713,3358,10317,10755,
#Partially deleted in new
chr1	225519043	225567270	chr1:225519043-225567270	0	-	225519123	225567270	789624	4	522,85,178,22,	0,11510,35862,48205,
#Partially deleted in new
chr1	225519197	225580257	chr1:225519197-225580257	0	-	225519197	225519197	8553170	5	368,85,178,166,91,	0,11356,35708,48051,60969,
#Partially deleted in new
chr1	225519417	225652716	chr1:225519417-225652716	0	-	225519417	225652690	789624	6	148,85,57,178,166,31,	0,11136,16089,35488,47831,133268,
#Partially deleted in new
chr1	225700603	225752243	chr1:225700603-225752243	3	+	225700603	225700603	8553170	3	503,103,924,	0,37491,50716,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	225741274	225741380	chr1:225741274-225741380	3	+	225741274	225741274	8553170	1	106,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	225777812	225786969	chr1:225777812-225786969	1	+	225777940	225786969	0	3	200,69,108,	0,5487,9049,
#Partially deleted in new
chr1	225777812	225789093	chr1:225777812-225789093	1	+	225777940	225789093	789624	3	200,69,60,	0,5487,11221,
#Partially deleted in new
chr1	225777828	225790466	chr1:225777828-225790466	3	+	225777940	225789359	0	3	184,69,1227,	0,5471,11411,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	225777836	225790466	chr1:225777836-225790466	1	+	225777940	225786969	0	4	176,69,124,1227,	0,5463,9025,11403,
#Partially deleted in new
chr1	225777934	225789524	chr1:225777934-225789524	1	+	225777940	225789093	789624	4	78,69,108,285,	0,5365,11099,11305,
#Partially deleted in new
chr1	225803147	225803448	chr1:225803147-225803448	7	+	225803147	225803147	16724991	1	301,	0,
#Partially deleted in new
chr1	225810091	225838773	chr1:225810091-225838773	0	+	225828729	225838773	789624	4	78,188,181,120,	0,18633,21687,28562,
#Partially deleted in new
chr1	225810094	225845559	chr1:225810094-225845559	3	+	225828729	225845347	789624	9	75,188,181,228,130,209,109,126,414,	0,18630,21684,28559,29122,29734,32271,34403,35051,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	225810133	225838697	chr1:225810133-225838697	0	+	225828729	225838697	789624	4	482,188,181,44,	0,18591,21645,28520,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	225810411	225845559	chr1:225810411-225845559	1	+	225828729	225845347	789624	9	204,188,181,228,130,209,109,126,414,	0,18313,21367,28242,28805,29417,31954,34086,34734,
#Partially deleted in new
chr1	225825353	225845563	chr1:225825353-225845563	1	+	225828729	225845347	789624	9	191,188,181,228,130,209,109,126,418,	0,3371,6425,13300,13863,14475,17012,19144,19792,
#Partially deleted in new
chr1	225828842	225832163	chr1:225828842-225832163	0	+	225828842	225828842	8553170	2	70,385,	0,2936,
#Partially deleted in new
chr1	225840882	225846522	chr1:225840882-225846522	3	-	225840882	225840882	8553170	2	305,43,	0,5597,
#Partially deleted in new
chr1	225845535	225882369	chr1:225845535-225882369	3	-	225847039	225877580	789624	25	1397,180,63,116,168,106,163,63,87,107,154,138,134,124,81,71,109,52,143,38,67,80,200,191,66,	0,1498,2956,3361,4376,7128,8093,10342,11116,11375,13660,15324,16682,16919,17235,20361,21038,21576,22352,25540,26451,28752,31859,33684,36768,
#Deleted in new
chr1	225846575	225847465	chr1:225846575-225847465	0	-	225846575	225846575	8553170	2	357,432,	0,458,
#Deleted in new
chr1	225847138	225848988	chr1:225847138-225848988	0	-	225847138	225847138	8553170	4	75,175,63,92,	0,1071,1353,1758,
#Partially deleted in new
chr1	225856703	225859541	chr1:225856703-225859541	0	-	225856703	225856703	8553170	3	35,107,346,	0,207,2492,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	225859662	225866211	chr1:225859662-225866211	0	-	225859662	225859662	8553170	4	2689,124,324,2270,	0,2792,3108,4279,
#Partially deleted in new
chr1	225860723	225866748	chr1:225860723-225866748	1	-	225860855	225862324	789624	7	274,134,124,81,154,76,175,	0,1494,1731,2047,5173,5409,5850,
#Partially deleted in new
chr1	225862539	225866410	chr1:225862539-225866410	0	-	225862539	225862539	8553170	3	39,81,514,	0,231,3357,
#Partially deleted in new
chr1	225871091	225877679	chr1:225871091-225877679	0	-	225871091	225877580	789624	4	22,67,80,285,	0,895,3196,6303,
#Partially deleted in new
chr1	225871573	225877494	chr1:225871573-225877494	0	-	225871573	225871573	8553170	3	480,80,100,	0,2714,5821,
#Partially deleted in new
chr1	225886281	225889146	chr1:225886281-225889146	3	-	225886726	225889066	789624	4	809,240,247,330,	0,1117,1504,2535,
#Partially deleted in new
chr1	225886695	225924278	chr1:225886695-225924278	3	-	225887072	225924110	789624	8	395,240,247,164,93,180,71,235,	0,703,1090,34512,34856,35508,37005,37348,
#Partially deleted in new
chr1	225887784	225911382	chr1:225887784-225911382	0	-	225887784	225887976	789624	2	248,264,	0,23334,
#Partially deleted in new
chr1	225919876	225924340	chr1:225919876-225924340	1	-	225920454	225924110	789624	6	744,164,93,180,71,297,	0,1331,1675,2327,3824,4167,
#Partially deleted in new
chr1	225919876	225924110	chr1:225919876-225924110	1	-	225920454	225924110	789624	9	744,164,93,222,102,77,71,29,36,	0,1331,1675,1981,2327,2430,3824,4168,4198,
#Partially deleted in new
chr1	225919877	225924259	chr1:225919877-225924259	3	-	225920454	225924110	789624	7	743,164,93,222,180,71,216,	0,1330,1674,1980,2326,3823,4166,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	225919877	225924278	chr1:225919877-225924278	0	-	225919877	225919877	8553170	5	743,164,93,1914,235,	0,1330,1674,1980,4166,
#Deleted in new
chr1	225921215	225921934	chr1:225921215-225921934	0	-	225921215	225921215	8553170	2	429,77,	0,642,
#Deleted in new
chr1	225921221	225923079	chr1:225921221-225923079	0	-	225921221	225921221	8553170	4	150,93,222,876,	0,330,636,982,
#Partially deleted in new
chr1	225921603	225923993	chr1:225921603-225923993	0	-	225921603	225923730	789624	5	41,222,180,71,83,	0,254,600,2097,2307,
#Partially deleted in new
chr1	225922028	225923891	chr1:225922028-225923891	0	-	225922028	225923730	789624	3	51,180,191,	0,175,1672,
#Deleted in new
chr1	225922079	225922142	chr1:225922079-225922142	3	-	225922079	225922079	5263520	1	63,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	225923139	225924000	chr1:225923139-225924000	0	-	225923139	225923139	8553170	2	632,90,	0,771,
#Deleted in new
chr1	225936410	225937557	chr1:225936410-225937557	3	-	225936410	225936410	8553170	2	167,175,	0,972,
#Partially deleted in new
chr1	225936597	225941383	chr1:225936597-225941383	1	-	225937440	225941140	789624	5	1207,240,116,29,493,	0,2763,3158,3376,4293,
#Partially deleted in new
chr1	225936603	225941489	chr1:225936603-225941489	3	-	225937440	225941140	789624	4	1201,240,247,599,	0,2757,3152,4287,
#Deleted in new
chr1	225939431	225940101	chr1:225939431-225940101	0	-	225939431	225939431	8553170	2	169,346,	0,324,
#Deleted in new
chr1	225964178	225964428	chr1:225964178-225964428	7	+	225964178	225964178	16724991	1	250,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	225982701	225999331	chr1:225982701-225999331	3	-	225985301	225999312	789624	7	2822,493,121,170,112,118,139,	0,5194,8541,9696,10189,12564,16491,
#Partially deleted in new
chr1	226060711	226061876	chr1:226060711-226061876	3	-	226060711	226060711	8553170	2	370,120,	0,1045,
#Partially deleted in new
chr1	226061850	226071523	chr1:226061850-226071523	3	+	226064351	226071479	0	5	244,77,151,154,173,	0,884,2478,3805,9500,
#Partially deleted in new
chr1	226062677	226071999	chr1:226062677-226071999	1	+	226064351	226071479	0	4	134,151,154,649,	0,1651,2978,8673,
#Partially deleted in new
chr1	226062713	226067269	chr1:226062713-226067269	1	+	226064351	226065899	789624	3	98,151,1614,	0,1615,2942,
#Partially deleted in new
chr1	226063976	226072001	chr1:226063976-226072001	1	+	226064351	226071479	0	3	503,154,651,	0,1679,7374,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	226083638	226089496	chr1:226083638-226089496	1	+	226083638	226083638	8553170	3	330,258,7,	0,3157,5851,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	226083950	226090292	chr1:226083950-226090292	3	+	226083950	226083950	8553170	4	18,172,165,68,	0,2931,5539,6274,
#Deleted in new
chr1	226127177	226127346	chr1:226127177-226127346	7	+	226127177	226127177	16724991	1	169,	0,
#Partially deleted in new
chr1	226144678	226186730	chr1:226144678-226186730	3	-	226146609	226186675	0	8	2143,285,187,175,159,141,142,341,	0,7656,9968,14505,16852,20110,21180,41711,
#Partially deleted in new
chr1	226148002	226155071	chr1:226148002-226155071	3	+	226148002	226148002	8553170	2	66,469,	0,6600,
#Partially deleted in new
chr1	226154641	226161632	chr1:226154641-226161632	0	-	226154641	226154641	8553170	2	192,102,	0,6889,
#Deleted in new
chr1	226188869	226189221	chr1:226188869-226189221	7	-	226188869	226188869	16724991	1	352,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	226223617	226227054	chr1:226223617-226227054	3	+	226223681	226225812	789624	2	457,1548,	0,1889,
#Partially deleted in new
chr1	226223617	226225864	chr1:226223617-226225864	1	+	226223681	226225812	789624	2	457,382,	0,1865,
#Deleted in new
chr1	226225502	226226389	chr1:226225502-226226389	0	+	226225502	226225502	8553170	2	145,639,	0,248,
#Partially deleted in new
chr1	226231148	226309172	chr1:226231148-226309172	0	-	226232500	226309172	789624	14	1458,98,180,126,81,102,120,134,158,126,134,95,33,64,	0,1947,2195,7822,19690,34384,35064,36808,46626,55184,56515,66570,70024,77960,
#Partially deleted in new
chr1	226231156	226309733	chr1:226231156-226309733	3	-	226232500	226309187	789624	15	1450,98,180,126,81,102,120,134,158,126,134,105,95,33,625,	0,1939,2187,7814,19682,34376,35056,36800,46618,55176,56507,64685,66562,70016,77952,
#Partially deleted in new
chr1	226231156	226309869	chr1:226231156-226309869	0	-	226232500	226309869	789624	15	1450,98,180,126,81,102,120,134,158,126,134,105,95,33,244,	0,1939,2187,7814,19682,34376,35056,36800,46618,55176,56507,64685,66562,70016,78469,
#Partially deleted in new
chr1	226232712	226309254	chr1:226232712-226309254	1	-	226233091	226309187	789624	13	481,180,126,81,102,120,134,158,126,134,95,33,146,	0,631,6258,18126,32820,33500,35244,45062,53620,54951,65006,68460,76396,
#Partially deleted in new
chr1	226287692	226309071	chr1:226287692-226309071	0	-	226287692	226297721	789624	5	105,105,95,33,348,	0,8149,10026,13480,21031,
#Partially deleted in new
chr1	226318014	226318693	chr1:226318014-226318693	7	-	226318014	226318014	16724991	1	679,	0,
#Partially deleted in new
chr1	226331998	226333655	chr1:226331998-226333655	7	-	226331998	226331998	16724991	3	259,75,206,	0,1324,1451,
#Partially deleted in new
chr1	226360690	226408073	chr1:226360690-226408073	3	-	226361459	226407929	0	23	851,115,62,128,153,99,129,123,84,129,196,133,69,243,141,148,177,117,100,215,116,166,264,	0,1278,2408,3252,4311,5263,6789,7508,9743,13535,16417,18451,18882,19231,20377,22345,24813,25635,27965,29719,31508,41523,47119,
#Partially deleted in new
chr1	226361294	226371115	chr1:226361294-226371115	0	-	226361294	226361294	8553170	8	247,115,62,128,153,1655,123,682,	0,674,1804,2648,3707,4659,6904,9139,
#Partially deleted in new
chr1	226361318	226364372	chr1:226361318-226364372	0	-	226361318	226361318	8553170	4	223,115,62,430,	0,650,1780,2624,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	226361409	226362252	chr1:226361409-226362252	0	-	226361409	226361409	8553170	2	132,284,	0,559,
#Partially deleted in new
chr1	226361707	226363160	chr1:226361707-226363160	0	-	226361707	226361707	8553170	2	376,62,	0,1391,
#Partially deleted in new
chr1	226365087	226370643	chr1:226365087-226370643	0	-	226365087	226365087	8553170	5	67,99,129,123,210,	0,866,2392,3111,5346,
#Partially deleted in new
chr1	226388697	226392792	chr1:226388697-226392792	0	-	226388697	226388697	8553170	4	58,215,116,153,	0,1712,3501,3942,
#Partially deleted in new
chr1	226392257	226408075	chr1:226392257-226408075	1	-	226392939	226407929	789624	4	57,64,166,266,	0,659,9956,15552,
#Partially deleted in new
chr1	226392939	226408079	chr1:226392939-226408079	1	-	226392939	226407929	789624	3	41,166,270,	0,9274,14870,
#Partially deleted in new
chr1	226401982	226407982	chr1:226401982-226407982	1	-	226402031	226407929	789624	2	397,173,	0,5827,
#Deleted in new
chr1	226411614	226412135	chr1:226411614-226412135	7	-	226411614	226411614	16724991	1	521,	0,
#Partially deleted in new
chr1	226438563	226439344	chr1:226438563-226439344	7	+	226438563	226438563	16724991	1	781,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	226445936	226446292	chr1:226445936-226446292	3	+	226445936	226445936	8553170	1	356,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	226493187	226493489	chr1:226493187-226493489	7	-	226493187	226493187	16724991	1	302,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	226548799	226609214	chr1:226548799-226609214	3	+	226548904	226602040	789624	4	307,180,9,7209,	0,48002,51866,53206,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	226548799	226605602	chr1:226548799-226605602	1	+	226548904	226602040	789624	4	307,180,5,3601,	0,48002,53195,53202,
#Partially deleted in new
chr1	226600588	226602194	chr1:226600588-226602194	0	+	226600588	226600588	8553170	2	86,189,	0,1417,
#Partially deleted in new
chr1	226631689	226737458	chr1:226631689-226737458	1	-	226634670	226737458	789624	7	3197,72,102,205,214,100,1932,	0,5989,7867,10231,15477,16982,103837,
#Partially deleted in new
chr1	226631689	226739175	chr1:226631689-226739175	3	-	226634670	226737458	789624	8	3197,72,102,205,214,100,2137,135,	0,5989,7867,10231,15477,16982,103837,107351,
#Deleted in new
chr1	226656639	226659670	chr1:226656639-226659670	0	-	226656639	226656639	8553170	2	635,84,	0,2947,
#Partially deleted in new
chr1	226656679	226675067	chr1:226656679-226675067	3	-	226656679	226656679	789624	2	595,151,	0,18237,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	226668896	226676345	chr1:226668896-226676345	3	+	226668896	226668896	8553170	2	306,232,	0,7217,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	226707189	226739323	chr1:226707189-226739323	1	-	226707912	226737458	789624	3	726,2137,283,	0,28337,31851,
#Deleted in new
chr1	226781500	226781744	chr1:226781500-226781744	7	+	226781500	226781500	16724991	1	244,	0,
#Partially deleted in new
chr1	226870183	226881970	chr1:226870183-226881970	0	+	226881907	226881970	789624	4	322,143,186,83,	0,1078,5181,11704,
#Partially deleted in new
chr1	226870562	226896102	chr1:226870562-226896102	3	+	226881907	226895579	789624	13	87,143,186,161,215,142,68,221,99,84,102,119,679,	0,699,4802,11325,13142,14975,17528,18266,19472,20715,21180,23444,24861,
#Partially deleted in new
chr1	226870615	226885568	chr1:226870615-226885568	0	+	226881907	226885568	789624	5	34,186,161,215,31,	0,4749,11272,13089,14922,
#Partially deleted in new
chr1	226870619	226895803	chr1:226870619-226895803	1	+	226881907	226895579	789624	13	30,143,186,161,215,142,68,221,99,84,99,119,380,	0,642,4745,11268,13085,14918,17471,18209,19415,20658,21126,23387,24804,
#Partially deleted in new
chr1	226870862	226875552	chr1:226870862-226875552	0	+	226870862	226870862	8553170	2	542,188,	0,4502,
#Partially deleted in new
chr1	226871263	226891344	chr1:226871263-226891344	0	+	226888111	226891344	789624	6	141,186,68,221,99,67,	0,4101,16827,17565,18771,20014,
#Partially deleted in new
chr1	226871267	226896098	chr1:226871267-226896098	1	+	226880645	226895579	789624	13	137,186,256,161,215,142,68,221,99,84,102,119,675,	0,4097,9201,10620,12437,14270,16823,17561,18767,20010,20475,22739,24156,
#Partially deleted in new
chr1	226880645	226896105	chr1:226880645-226896105	1	+	226880645	226895579	789624	11	79,161,215,142,68,221,99,84,102,119,682,	0,1242,3059,4892,7445,8183,9389,10632,11097,13361,14778,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	226884622	226895691	chr1:226884622-226895691	1	+	226885613	226895579	789624	9	60,142,68,221,99,84,102,119,268,	0,915,3468,4206,5412,6655,7120,9384,10801,
#Deleted in new
chr1	226890565	226891820	chr1:226890565-226891820	0	+	226890565	226890565	8553170	3	400,88,78,	0,712,1177,
#Partially deleted in new
chr1	226890818	226895544	chr1:226890818-226895544	0	+	226890818	226890818	8553170	5	147,84,99,119,121,	0,459,927,3188,4605,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	226897535	226987545	chr1:226897535-226987545	3	+	226961385	226986737	0	20	2020,162,93,169,134,184,186,411,67,75,123,86,141,82,94,142,108,66,87,1093,	0,10986,12166,13053,19991,41872,63841,67464,68135,79913,84491,85142,85358,86016,86225,86558,87012,87340,87718,88917,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	226899404	226903799	chr1:226899404-226903799	0	+	226899404	226899404	8553170	2	151,298,	0,4097,
#Partially deleted in new
chr1	226940285	226987544	chr1:226940285-226987544	1	+	226961541	226986737	0	15	114,55,411,67,75,123,86,141,82,94,142,108,66,87,1092,	0,21222,24714,25385,37163,41741,42392,42608,43266,43475,43808,44262,44590,44968,46167,
#Partially deleted in new
chr1	226940287	226987544	chr1:226940287-226987544	1	+	226961385	226986737	0	15	112,186,411,67,75,123,86,141,82,94,142,108,66,87,1092,	0,21089,24712,25383,37161,41739,42390,42606,43264,43473,43806,44260,44588,44966,46165,
#Partially deleted in new
chr1	226940293	226987543	chr1:226940293-226987543	0	+	226940293	226940293	8553170	8	106,75,737,1342,108,66,87,1091,	0,37155,41733,42600,44254,44582,44960,46159,
#Partially deleted in new
chr1	226940378	226977523	chr1:226940378-226977523	0	+	226940378	226940378	8553170	5	202,186,411,67,75,	0,20998,24621,25292,37070,
#Deleted in new
chr1	226958068	226958267	chr1:226958068-226958267	7	-	226958068	226958068	16724991	1	199,	0,
#Partially deleted in new
chr1	226974854	226977487	chr1:226974854-226977487	0	+	226974854	226974854	8553170	2	225,39,	0,2594,
#Deleted in new
chr1	226977403	226987544	chr1:226977403-226987544	0	+	226977403	226977403	8553170	11	120,123,86,141,82,94,142,108,66,87,1092,	0,4623,5274,5490,6148,6357,6690,7144,7472,7850,9049,
#Deleted in new
chr1	226983006	226987544	chr1:226983006-226987544	0	+	226983006	226983006	8553170	7	28,82,475,108,66,87,1092,	0,545,754,1541,1869,2247,3446,
#Partially deleted in new
chr1	226989864	227317714	chr1:226989864-227317714	1	-	226994267	227317182	789624	37	4535,158,118,118,124,85,98,594,63,217,82,140,137,106,84,39,77,92,149,106,125,106,248,111,243,134,123,167,80,249,201,94,149,96,84,92,710,	0,4958,15129,26215,27062,33398,36190,38792,40543,41433,43469,44790,45606,50266,58062,69508,79912,82343,83999,84394,91028,102021,111127,122447,122806,129939,139244,149711,153080,155624,157494,170678,203921,209692,223271,264199,327140,
#Partially deleted in new
chr1	226989864	227317182	chr1:226989864-227317182	1	-	226994267	227317182	789624	35	4535,158,118,118,124,85,98,594,63,217,82,140,137,106,84,77,92,149,106,125,106,248,111,134,123,167,80,249,201,94,149,96,84,92,178,	0,4958,15129,26215,27062,33398,36190,38792,40543,41433,43469,44790,45606,50266,58062,79912,82343,83999,84394,91028,102021,111127,122447,129939,139244,149711,153080,155624,157494,170678,203921,209692,223271,264199,327140,
#Partially deleted in new
chr1	226989864	227318474	chr1:226989864-227318474	3	-	226994267	227317182	789624	36	4535,158,118,118,124,85,98,594,63,217,82,140,137,106,84,77,92,149,106,125,106,248,111,243,134,123,167,80,249,201,94,149,96,84,92,1470,	0,4958,15129,26215,27062,33398,36190,38792,40543,41433,43469,44790,45606,50266,58062,79912,82343,83999,84394,91028,102021,111127,122447,122806,129939,139244,149711,153080,155624,157494,170678,203921,209692,223271,264199,327140,
#Partially deleted in new
chr1	226989865	227318125	chr1:226989865-227318125	1	-	226994267	227317182	789624	36	4534,158,118,118,124,85,98,594,63,217,82,140,137,106,84,17,92,149,106,125,106,248,111,243,134,123,167,80,249,201,94,149,96,84,92,1121,	0,4957,15128,26214,27061,33397,36189,38791,40542,41432,43468,44789,45605,50265,58061,69507,82342,83998,84393,91027,102020,111126,122446,122805,129938,139243,149710,153079,155623,157493,170677,203920,209691,223270,264198,327139,
#Partially deleted in new
chr1	226989865	227318125	chr1:226989865-227318125	1	-	226994267	227101032	789624	37	4534,158,118,118,124,85,98,594,63,217,82,140,137,106,84,105,77,92,149,106,125,106,248,111,243,134,123,167,80,249,201,94,149,96,84,92,1121,	0,4957,15128,26214,27061,33397,36189,38791,40542,41432,43468,44789,45605,50265,58061,62015,79911,82342,83998,84393,91027,102020,111126,122446,122805,129938,139243,149710,153079,155623,157493,170677,203920,209691,223270,264198,327139,
#Partially deleted in new
chr1	226989865	227080979	chr1:226989865-227080979	0	-	226994267	227080979	789624	21	4534,158,118,186,118,124,85,98,594,63,217,82,140,137,106,84,77,92,149,106,87,	0,4957,15128,21012,26214,27061,33397,36189,38791,40542,41432,43468,44789,45605,50265,58061,79911,82342,83998,84393,91027,
#Deleted in new
chr1	226992139	226993206	chr1:226992139-226993206	3	+	226992139	226992139	8553170	3	85,218,137,	0,253,930,
#Partially deleted in new
chr1	226993626	227101120	chr1:226993626-227101120	0	-	226994267	227101120	789624	23	773,158,118,118,124,85,98,594,63,217,82,140,137,106,84,105,77,92,149,106,125,106,129,	0,1196,11367,22453,23300,29636,32428,35030,36781,37671,39707,41028,41844,46504,54300,58254,76150,78581,80237,80632,87266,98259,107365,
#Partially deleted in new
chr1	227004054	227034717	chr1:227004054-227034717	0	-	227004916	227034717	789624	10	1057,118,124,85,98,594,63,217,82,63,	0,12025,12872,19208,22000,24602,26353,27243,29279,30600,
#Partially deleted in new
chr1	227023262	227074364	chr1:227023262-227074364	0	-	227023262	227074364	789624	16	85,98,594,63,217,82,140,137,106,84,105,48,77,92,149,106,	0,2792,5394,7145,8035,10071,11392,12208,16868,24664,28618,45391,46514,48945,50601,50996,
#Partially deleted in new
chr1	227068466	227081017	chr1:227068466-227081017	0	-	227068466	227068466	8553170	5	1387,92,149,106,125,	0,3741,5397,5792,12426,
#Deleted in new
chr1	227111983	227112799	chr1:227111983-227112799	0	-	227111983	227111983	8553170	2	439,129,	0,687,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	227178332	227183444	chr1:227178332-227183444	3	+	227178332	227178332	8553170	3	102,134,578,	0,2116,4534,
#Partially deleted in new
chr1	227193650	227317047	chr1:227193650-227317047	0	-	227193650	227193650	8553170	5	284,96,84,92,43,	0,5906,19485,60413,123354,
#Partially deleted in new
chr1	227199556	227254155	chr1:227199556-227254155	0	-	227199556	227199556	8553170	4	96,84,158,92,	0,13579,19706,54507,
#Partially deleted in new
chr1	227234268	227235355	chr1:227234268-227235355	7	+	227234268	227234268	16724991	2	517,304,	0,783,
#Partially deleted in new
chr1	227264775	227265207	chr1:227264775-227265207	7	-	227264775	227264775	16724991	1	432,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	227393590	227431035	chr1:227393590-227431035	3	+	227393590	227393590	8553170	4	114,96,130,1631,	0,1928,16164,35814,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	227409764	227426057	chr1:227409764-227426057	0	+	227409764	227409764	8553170	2	120,302,	0,15991,
#Partially deleted in new
chr1	227410616	227411319	chr1:227410616-227411319	7	-	227410616	227410616	16724991	1	703,	0,
#Deleted in new
chr1	227430525	227430976	chr1:227430525-227430976	7	+	227430525	227430525	16724991	1	451,	0,
#Deleted in new
chr1	227434063	227434346	chr1:227434063-227434346	7	+	227434063	227434063	16724991	1	283,	0,
#Deleted in new
chr1	227482252	227482454	chr1:227482252-227482454	7	+	227482252	227482252	16724991	1	202,	0,
#Deleted in new
chr1	227490690	227492296	chr1:227490690-227492296	7	+	227490690	227490690	16724991	5	211,240,124,95,106,	0,293,623,1083,1500,
#Deleted in new
chr1	227493028	227495142	chr1:227493028-227495142	7	-	227493028	227493028	16724991	4	1002,111,109,57,	0,1497,1687,2057,
#Deleted in new
chr1	227506181	227508292	chr1:227506181-227508292	7	+	227506181	227506181	16724991	4	57,109,111,999,	0,318,506,1112,
#Deleted in new
chr1	227509027	227510618	chr1:227509027-227510618	7	-	227509027	227509027	16724991	5	84,92,130,252,214,	0,436,850,1071,1377,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	227563542	227662461	chr1:227563542-227662461	3	+	227650991	227655828	789624	4	182,127,121,8126,	0,83001,87413,90793,
#Deleted in new
chr1	227598423	227599094	chr1:227598423-227599094	7	-	227598423	227598423	16724991	1	671,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	227650991	227662462	chr1:227650991-227662462	1	+	227650991	227655828	789624	2	85,8127,	0,3344,
#Partially deleted in new
chr1	227696891	227706699	chr1:227696891-227706699	7	-	227696891	227696891	16724991	5	535,275,74,50,143,	0,768,1238,9075,9665,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	227728538	227734352	chr1:227728538-227734352	0	+	227728538	227728538	8553170	3	248,163,1964,	0,3046,3850,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	227728548	227734352	chr1:227728548-227734352	0	+	227728548	227728548	8553170	2	238,1964,	0,3840,
#Partially deleted in new
chr1	227728617	227748186	chr1:227728617-227748186	0	+	227728617	227728617	8553170	3	169,128,495,	0,2967,19074,
#Partially deleted in new
chr1	227728656	227781226	chr1:227728656-227781226	1	+	227759088	227780673	789624	4	130,491,125,700,	0,30338,38302,51870,
#Partially deleted in new
chr1	227728706	227759485	chr1:227728706-227759485	0	+	227728706	227728706	8553170	3	80,163,491,	0,2878,30288,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	227730424	227734377	chr1:227730424-227734377	0	-	227730424	227730424	8553170	2	2252,1497,	0,2456,
#Partially deleted in new
chr1	227731188	227735411	chr1:227731188-227735411	3	-	227732391	227735411	789624	6	1488,147,268,126,166,400,	0,1692,2225,2718,3462,3823,
#Partially deleted in new
chr1	227731192	227735411	chr1:227731192-227735411	1	-	227732391	227735411	789624	6	1484,147,268,126,166,400,	0,1688,2221,2714,3458,3819,
#Partially deleted in new
chr1	227731223	227735283	chr1:227731223-227735283	1	-	227732391	227735273	789624	6	1453,147,268,126,166,272,	0,1657,2190,2683,3427,3788,
#Partially deleted in new
chr1	227731233	227735411	chr1:227731233-227735411	1	-	227732391	227735411	789624	6	1443,99,268,126,166,400,	0,1695,2180,2673,3417,3778,
#Partially deleted in new
chr1	227733147	227735076	chr1:227733147-227735076	0	-	227733147	227733147	8553170	4	534,126,166,65,	0,759,1503,1864,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	227733618	227734371	chr1:227733618-227734371	0	-	227733618	227733618	8553170	2	63,465,	0,288,
#Partially deleted in new
chr1	227734995	227781231	chr1:227734995-227781231	3	+	227735409	227780673	789624	5	504,542,491,125,705,	0,12696,23999,31963,45531,
#Partially deleted in new
chr1	227734995	227781226	chr1:227734995-227781226	1	+	227735409	227780673	789624	5	504,542,491,125,700,	0,12696,23999,31963,45531,
#Partially deleted in new
chr1	227735430	227776970	chr1:227735430-227776970	0	+	227735430	227775881	789624	4	69,491,125,1182,	0,23564,31528,40358,
#Partially deleted in new
chr1	227735435	227776969	chr1:227735435-227776969	0	+	227735435	227775881	789624	5	64,542,491,125,1181,	0,12256,23559,31523,40353,
#Partially deleted in new
chr1	227735452	227781226	chr1:227735452-227781226	1	+	227747736	227780673	789624	5	47,542,491,125,700,	0,12239,23542,31506,45074,
#Partially deleted in new
chr1	227736172	227748115	chr1:227736172-227748115	0	+	227736172	227736172	8553170	2	315,424,	0,11519,
#Deleted in new
chr1	227743830	227747191	chr1:227743830-227747191	3	-	227743830	227743830	8553170	2	291,1417,	0,1944,
#Partially deleted in new
chr1	227748062	227759652	chr1:227748062-227759652	0	+	227748062	227759490	789624	2	171,658,	0,10932,
#Partially deleted in new
chr1	227748153	227770744	chr1:227748153-227770744	0	+	227748153	227770645	789624	4	80,491,125,174,	0,10841,18805,22417,
#Partially deleted in new
chr1	227815692	227846470	chr1:227815692-227846470	3	+	227815716	227846208	789624	5	172,163,272,143,517,	0,397,1516,29777,30261,
#Partially deleted in new
chr1	227918655	227947898	chr1:227918655-227947898	3	-	227921517	227947887	789624	4	3345,263,257,106,	0,5482,6607,29137,
#Deleted in new
chr1	227941589	227941683	chr1:227941589-227941683	3	-	227941589	227941589	5263520	1	94,	0,
#Deleted in new
chr1	227975389	227978193	chr1:227975389-227978193	7	-	227975389	227975389	16724991	3	117,438,1893,	0,452,911,
#Deleted in new
chr1	227980050	227980227	chr1:227980050-227980227	7	+	227980050	227980050	16724991	1	177,	0,
#Partially deleted in new
chr1	228007050	228061260	chr1:228007050-228061260	3	+	228007128	228059465	789624	4	149,242,266,2275,	0,15616,43605,51935,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	228073908	228076550	chr1:228073908-228076550	3	-	228073908	228073908	8553170	1	2642,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	228073912	228076550	chr1:228073912-228076550	0	-	228073912	228073912	8553170	1	2638,	0,
#Partially deleted in new
chr1	228082659	228099212	chr1:228082659-228099212	3	+	228097114	228098013	0	5	106,185,111,125,1361,	0,14418,14682,14931,15192,
#Partially deleted in new
chr1	228082659	228099211	chr1:228082659-228099211	1	+	228097114	228098013	0	5	191,185,111,125,1360,	0,14418,14682,14931,15192,
#Partially deleted in new
chr1	228082729	228098027	chr1:228082729-228098027	0	+	228082729	228082729	8553170	4	36,375,125,176,	0,14348,14861,15122,
#Partially deleted in new
chr1	228082740	228098379	chr1:228082740-228098379	0	+	228082740	228082740	8553170	5	110,185,111,125,528,	0,14337,14601,14850,15111,
#Partially deleted in new
chr1	228082788	228098188	chr1:228082788-228098188	0	+	228082788	228082788	8553170	5	62,185,111,125,337,	0,14289,14553,14802,15063,
#Partially deleted in new
chr1	228082790	228097894	chr1:228082790-228097894	0	+	228082790	228082790	8553170	6	60,54,185,111,125,43,	0,13660,14287,14551,14800,15061,
#Partially deleted in new
chr1	228083084	228097655	chr1:228083084-228097655	0	+	228083084	228083084	8553170	4	428,185,111,65,	0,13993,14257,14506,
#Partially deleted in new
chr1	228083136	228098122	chr1:228083136-228098122	0	+	228083136	228083136	8553170	5	238,185,111,125,271,	0,13941,14205,14454,14715,
#Partially deleted in new
chr1	228083149	228097948	chr1:228083149-228097948	0	+	228083149	228083149	8553170	5	160,185,111,125,97,	0,13928,14192,14441,14702,
#Partially deleted in new
chr1	228083149	228099211	chr1:228083149-228099211	1	+	228097114	228098013	0	5	225,185,111,125,1360,	0,13928,14192,14441,14702,
#Partially deleted in new
chr1	228083183	228097199	chr1:228083183-228097199	0	+	228083183	228083183	8553170	2	169,122,	0,13894,
#Partially deleted in new
chr1	228083221	228097896	chr1:228083221-228097896	0	+	228083221	228083221	8553170	5	131,185,111,125,45,	0,13856,14120,14369,14630,
#Partially deleted in new
chr1	228088115	228097943	chr1:228088115-228097943	0	+	228088115	228088115	8553170	5	162,185,111,125,92,	0,8962,9226,9475,9736,
#Partially deleted in new
chr1	228090487	228097453	chr1:228090487-228097453	0	+	228090487	228090487	8553170	3	584,185,112,	0,6590,6854,
#Deleted in new
chr1	228097262	228097341	chr1:228097262-228097341	3	+	228097262	228097262	5263520	1	79,	0,
#Deleted in new
chr1	228100725	228103441	chr1:228100725-228103441	0	-	228100725	228100725	789624	5	529,1222,46,151,308,	0,613,1917,2173,2408,
#Deleted in new
chr1	228100730	228103462	chr1:228100730-228103462	3	-	228101130	228103227	789624	8	524,135,86,73,83,46,151,329,	0,608,1349,1579,1747,1912,2168,2403,
#Deleted in new
chr1	228100730	228103320	chr1:228100730-228103320	0	-	228100730	228100730	8553170	7	524,135,303,83,46,151,187,	0,608,1349,1747,1912,2168,2403,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	228100732	228105411	chr1:228100732-228105411	0	-	228100732	228100732	8553170	9	522,135,180,86,73,83,46,151,2278,	0,606,1002,1347,1577,1745,1910,2166,2401,
#Deleted in new
chr1	228101412	228103002	chr1:228101412-228103002	0	-	228101412	228101412	8553170	5	61,86,251,46,104,	0,667,897,1230,1486,
#Deleted in new
chr1	228102055	228103447	chr1:228102055-228103447	0	-	228102055	228102055	8553170	6	110,73,83,46,151,125,	0,254,422,587,843,1267,
#Deleted in new
chr1	228102241	228103389	chr1:228102241-228103389	0	-	228102241	228102241	8553170	3	447,151,256,	0,657,892,
#Partially deleted in new
chr1	228106678	228109299	chr1:228106678-228109299	1	-	228106759	228108260	0	5	240,202,84,67,39,	0,989,1556,2276,2582,
#Partially deleted in new
chr1	228106678	228109306	chr1:228106678-228109306	1	-	228106759	228108260	0	5	240,202,84,38,158,	0,989,1556,1758,2470,
#Partially deleted in new
chr1	228106678	228109299	chr1:228106678-228109299	1	-	228106759	228108260	0	5	240,202,84,67,151,	0,989,1556,2276,2470,
#Partially deleted in new
chr1	228106678	228109283	chr1:228106678-228109283	1	-	228106759	228108260	0	4	240,202,84,135,	0,989,1556,2470,
#Partially deleted in new
chr1	228106678	228109299	chr1:228106678-228109299	1	-	228106759	228107676	789624	6	240,202,161,84,585,151,	0,989,1298,1556,1758,2470,
#Partially deleted in new
chr1	228106678	228108642	chr1:228106678-228108642	1	-	228106759	228107676	789624	4	240,202,74,206,	0,989,1566,1758,
#Partially deleted in new
chr1	228106678	228108744	chr1:228106678-228108744	1	-	228106759	228108260	0	4	240,202,84,308,	0,989,1556,1758,
#Partially deleted in new
chr1	228106678	228108897	chr1:228106678-228108897	1	-	228106759	228108260	0	4	240,202,87,461,	0,989,1556,1758,
#Partially deleted in new
chr1	228106678	228109004	chr1:228106678-228109004	1	-	228106759	228108260	0	3	240,202,770,	0,989,1556,
#Partially deleted in new
chr1	228106678	228109016	chr1:228106678-228109016	1	-	228106759	228108260	0	5	240,202,84,72,62,	0,989,1556,1758,2276,
#Partially deleted in new
chr1	228106678	228109025	chr1:228106678-228109025	1	-	228106759	228108260	0	5	240,202,108,84,71,	0,989,1298,1556,2276,
#Partially deleted in new
chr1	228106678	228109031	chr1:228106678-228109031	1	-	228106759	228108260	0	5	240,202,84,38,77,	0,989,1556,1758,2276,
#Partially deleted in new
chr1	228106678	228109031	chr1:228106678-228109031	1	-	228106759	228108260	0	5	240,202,87,38,77,	0,989,1556,1758,2276,
#Partially deleted in new
chr1	228106678	228109031	chr1:228106678-228109031	1	-	228106759	228108260	0	4	240,202,84,77,	0,989,1556,2276,
#Partially deleted in new
chr1	228106678	228109055	chr1:228106678-228109055	1	-	228106759	228108260	0	4	240,202,87,101,	0,989,1556,2276,
#Partially deleted in new
chr1	228106678	228109280	chr1:228106678-228109280	1	-	228106759	228108260	0	5	240,202,84,68,132,	0,989,1556,1762,2470,
#Partially deleted in new
chr1	228106678	228109299	chr1:228106678-228109299	1	-	228106759	228108260	0	4	240,202,84,39,	0,989,1556,2582,
#Partially deleted in new
chr1	228106678	228109299	chr1:228106678-228109299	1	-	228106759	228108260	0	5	240,202,84,38,39,	0,989,1556,1758,2582,
#Partially deleted in new
chr1	228106678	228108325	chr1:228106678-228108325	1	-	228106759	228107676	789624	4	240,202,161,91,	0,989,1298,1556,
#Partially deleted in new
chr1	228106678	228108275	chr1:228106678-228108275	0	-	228106678	228106678	8553170	2	240,608,	0,989,
#Partially deleted in new
chr1	228106679	228109312	chr1:228106679-228109312	3	-	228106759	228108260	0	6	239,202,87,38,67,52,	0,988,1555,1757,2275,2581,
#Partially deleted in new
chr1	228106679	228109312	chr1:228106679-228109312	1	-	228106759	228108260	0	6	239,202,108,84,67,164,	0,988,1297,1555,2275,2469,
#Deleted in new
chr1	228107666	228109300	chr1:228107666-228109300	0	-	228107666	228108260	789624	5	203,84,38,67,152,	0,568,770,1288,1482,
#Deleted in new
chr1	228107766	228109016	chr1:228107766-228109016	0	-	228107766	228108260	789624	3	103,84,580,	0,468,670,
#Deleted in new
chr1	228107784	228108573	chr1:228107784-228108573	0	-	228107784	228107784	8553170	4	85,161,87,137,	0,192,450,652,
#Deleted in new
chr1	228107823	228109302	chr1:228107823-228109302	0	-	228107823	228108260	789624	4	46,87,461,42,	0,411,613,1437,
#Deleted in new
chr1	228108058	228109031	chr1:228108058-228109031	0	-	228108058	228108058	8553170	2	263,595,	0,378,
#Deleted in new
chr1	228108113	228109290	chr1:228108113-228109290	0	-	228108113	228108113	8553170	3	205,585,30,	0,323,1147,
#Deleted in new
chr1	228108225	228109296	chr1:228108225-228109296	0	-	228108225	228108225	8553170	2	93,148,	0,923,
#Deleted in new
chr1	228108231	228109036	chr1:228108231-228109036	0	-	228108231	228108231	8553170	2	87,82,	0,723,
#Deleted in new
chr1	228108234	228109295	chr1:228108234-228109295	0	-	228108234	228108260	789624	4	84,38,67,35,	0,202,720,1026,
#Deleted in new
chr1	228108246	228109278	chr1:228108246-228109278	0	-	228108246	228108260	8553170	3	75,585,130,	0,190,902,
#Deleted in new
chr1	228108261	228109290	chr1:228108261-228109290	0	-	228108261	228108261	8553170	2	760,30,	0,999,
#Deleted in new
chr1	228108289	228109254	chr1:228108289-228109254	0	-	228108289	228108289	8553170	2	29,818,	0,147,
#Partially deleted in new
chr1	228114996	228115473	chr1:228114996-228115473	7	-	228114996	228114996	16724991	1	477,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	228121522	228123771	chr1:228121522-228123771	3	+	228121522	228121522	8553170	1	2249,	0,
#Partially deleted in new
chr1	228134784	228134992	chr1:228134784-228134992	7	-	228134784	228134784	16724991	1	208,	0,
#Deleted in new
chr1	228139961	228148840	chr1:228139961-228148840	3	+	228145512	228148697	789624	8	198,114,42,97,139,85,86,176,	0,5549,6064,6880,7444,7653,8409,8703,
#Deleted in new
chr1	228140227	228148955	chr1:228140227-228148955	1	+	228140302	228148697	789624	8	136,114,42,97,139,85,86,291,	0,5283,5798,6614,7178,7387,8143,8437,
#Deleted in new
chr1	228140227	228147693	chr1:228140227-228147693	0	+	228140227	228140227	8553170	6	136,154,42,78,139,79,	0,5243,5798,6633,7178,7387,
#Deleted in new
chr1	228140264	228146952	chr1:228140264-228146952	0	+	228140264	228140264	8553170	6	99,165,204,114,42,111,	0,859,1361,5246,5761,6577,
#Deleted in new
chr1	228140265	228148882	chr1:228140265-228148882	0	+	228140265	228140265	8553170	7	98,114,42,78,139,85,218,	0,5245,5760,6595,7140,7349,8399,
#Deleted in new
chr1	228140278	228141833	chr1:228140278-228141833	0	+	228140278	228140278	8553170	2	85,710,	0,845,
#Deleted in new
chr1	228140281	228146908	chr1:228140281-228146908	0	+	228140281	228140281	8553170	4	82,165,557,67,	0,842,5229,6560,
#Deleted in new
chr1	228140288	228148880	chr1:228140288-228148880	1	+	228145512	228148697	789624	8	75,133,42,97,139,85,86,216,	0,5203,5737,6553,7117,7326,8082,8376,
#Deleted in new
chr1	228140289	228148946	chr1:228140289-228148946	1	+	228145512	228148697	789624	9	74,165,114,42,97,139,85,86,282,	0,834,5221,5736,6552,7116,7325,8081,8375,
#Deleted in new
chr1	228140289	228148955	chr1:228140289-228148955	1	+	228140302	228148852	789624	7	74,114,42,97,139,85,291,	0,5221,5736,6552,7116,7325,8375,
#Deleted in new
chr1	228140289	228148946	chr1:228140289-228148946	0	+	228140289	228140289	8553170	9	74,165,114,42,78,139,85,86,282,	0,834,5221,5736,6571,7116,7325,8081,8375,
#Deleted in new
chr1	228140297	228148691	chr1:228140297-228148691	0	+	228140302	228148691	789624	8	66,114,42,97,139,85,86,27,	0,5213,5728,6544,7108,7317,8073,8367,
#Deleted in new
chr1	228140301	228148833	chr1:228140301-228148833	1	+	228140302	228148697	789624	9	62,114,42,97,139,85,51,86,169,	0,5209,5724,6540,7104,7313,7932,8069,8363,
#Deleted in new
chr1	228140306	228148877	chr1:228140306-228148877	0	+	228140306	228140306	8553170	7	57,114,42,97,85,86,213,	0,5204,5719,6535,7308,8064,8358,
#Deleted in new
chr1	228140316	228148808	chr1:228140316-228148808	1	+	228145512	228148755	789624	8	47,133,42,97,139,79,169,144,	0,5175,5709,6525,7089,7304,8054,8348,
#Deleted in new
chr1	228140317	228148809	chr1:228140317-228148809	0	+	228141633	228148809	789624	8	46,197,133,42,78,139,85,145,	0,1315,5174,5708,6543,7088,7297,8347,
#Deleted in new
chr1	228140317	228147657	chr1:228140317-228147657	0	+	228140317	228140317	8553170	7	46,384,114,42,97,139,43,	0,806,5193,5708,6524,7088,7297,
#Deleted in new
chr1	228140331	228148752	chr1:228140331-228148752	1	+	228145512	228148697	789624	8	32,139,42,78,139,85,86,88,	0,5179,5694,6529,7074,7283,8039,8333,
#Deleted in new
chr1	228141122	228146883	chr1:228141122-228146883	0	+	228141122	228141122	8553170	4	166,114,42,23,	0,4388,4903,5738,
#Deleted in new
chr1	228141122	228145762	chr1:228141122-228145762	0	+	228141122	228141122	8553170	2	707,252,	0,4388,
#Deleted in new
chr1	228141131	228147710	chr1:228141131-228147710	0	+	228141131	228141131	8553170	6	157,114,55,78,139,96,	0,4379,4881,5729,6274,6483,
#Deleted in new
chr1	228141195	228146066	chr1:228141195-228146066	0	+	228141195	228141195	8553170	3	93,139,41,	0,4315,4830,
#Deleted in new
chr1	228141248	228147445	chr1:228141248-228147445	0	+	228141248	228141248	8553170	5	40,114,42,78,40,	0,4262,4777,5612,6157,
#Deleted in new
chr1	228141381	228148457	chr1:228141381-228148457	0	+	228141633	228148457	789624	7	448,114,42,97,139,85,87,	0,4129,4644,5460,6024,6233,6989,
#Deleted in new
chr1	228144327	228148951	chr1:228144327-228148951	1	+	228145512	228148697	789624	8	425,114,42,97,139,85,86,287,	0,1183,1698,2514,3078,3287,4043,4337,
#Deleted in new
chr1	228144896	228148946	chr1:228144896-228148946	0	+	228144896	228144896	8553170	4	2042,139,85,282,	0,2509,2718,3768,
#Deleted in new
chr1	228145453	228148984	chr1:228145453-228148984	1	+	228145512	228148697	789624	7	171,42,97,139,85,86,320,	0,572,1388,1952,2161,2917,3211,
#Deleted in new
chr1	228145509	228147559	chr1:228145509-228147559	0	+	228145509	228145509	8553170	4	140,42,78,154,	0,516,1351,1896,
#Deleted in new
chr1	228145509	228147487	chr1:228145509-228147487	0	+	228145509	228145509	8553170	3	558,97,82,	0,1332,1896,
#Deleted in new
chr1	228145509	228146235	chr1:228145509-228146235	0	+	228145509	228145509	8553170	2	115,210,	0,516,
#Deleted in new
chr1	228145514	228148439	chr1:228145514-228148439	0	+	228145514	228145514	8553170	6	110,55,97,139,85,69,	0,498,1327,1891,2100,2856,
#Deleted in new
chr1	228145560	228148950	chr1:228145560-228148950	0	+	228145560	228145560	8553170	6	89,42,97,139,85,286,	0,465,1281,1845,2054,3104,
#Deleted in new
chr1	228145882	228148724	chr1:228145882-228148724	0	+	228145882	228145882	8553170	6	185,78,139,85,86,60,	0,978,1523,1732,2488,2782,
#Deleted in new
chr1	228146825	228147699	chr1:228146825-228147699	0	+	228146825	228146825	8553170	3	113,135,85,	0,584,789,
#Deleted in new
chr1	228146839	228148773	chr1:228146839-228148773	0	+	228146839	228146839	8553170	3	99,294,403,	0,566,1531,
#Deleted in new
chr1	228147423	228148947	chr1:228147423-228148947	0	+	228147423	228147423	8553170	3	121,85,577,	0,191,947,
#Deleted in new
chr1	228147465	228148933	chr1:228147465-228148933	0	+	228147465	228147465	8553170	3	234,86,269,	0,905,1199,
#Deleted in new
chr1	228148090	228148955	chr1:228148090-228148955	0	+	228148090	228148090	8553170	2	366,291,	0,574,
#Deleted in new
chr1	228148117	228148955	chr1:228148117-228148955	0	+	228148117	228148117	8553170	3	167,86,291,	0,253,547,
#Partially deleted in new
chr1	228149851	228159826	chr1:228149851-228159826	3	+	228157758	228159078	789624	2	156,2087,	0,7888,
#Partially deleted in new
chr1	228164085	228165512	chr1:228164085-228165512	0	-	228164085	228164085	789624	2	407,39,	0,1388,
#Deleted in new
chr1	228164093	228164848	chr1:228164093-228164848	3	-	228164093	228164093	789624	2	399,195,	0,560,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	228165814	228182257	chr1:228165814-228182257	3	+	228165816	228175513	789624	3	343,338,7136,	0,8877,9307,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	228171177	228182257	chr1:228171177-228182257	0	+	228171177	228171177	8553170	3	2341,338,7136,	0,3514,3944,
#Deleted in new
chr1	228174549	228175575	chr1:228174549-228175575	0	+	228174549	228174549	8553170	3	61,338,454,	0,142,572,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	228203505	228213660	chr1:228203505-228213660	0	-	228203505	228203505	789624	2	650,239,	0,9916,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	228203984	228213646	chr1:228203984-228213646	3	-	228203984	228203984	8553170	4	171,104,124,225,	0,345,1339,9437,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	228204465	228213664	chr1:228204465-228213664	1	-	228204465	228204465	789624	4	2185,78,387,243,	0,5221,8055,8956,
#Partially deleted in new
chr1	228208129	228361250	chr1:228208129-228361250	1	+	228211783	228360755	0	81	56,1006,270,261,309,267,282,276,276,276,276,276,276,276,276,276,276,279,267,270,267,267,113,154,105,267,270,267,267,267,273,267,267,273,267,267,264,264,264,264,264,264,264,267,267,273,273,197,76,273,276,288,282,371,871,279,79,125,198,33,99,219,61,71,123,140,201,83,174,157,117,165,159,178,114,168,103,130,112,43,1654,	0,3636,5311,6044,6660,7433,8291,8883,16329,35053,36166,37283,38398,41835,48521,55986,60400,65640,66048,66442,67630,68320,68800,69030,69624,70559,71045,71691,72049,72400,73803,74888,75373,77948,78643,79564,79931,80495,83768,84393,85223,86022,86650,98242,98771,99129,99981,100969,101354,107717,108579,109334,109762,110754,113214,115198,124730,125069,125453,126382,126685,126950,127661,128070,128874,129114,129814,130160,130723,131815,132376,132594,132965,133307,133989,141760,142711,143191,144821,148021,151467,
#Partially deleted in new
chr1	228208129	228378874	chr1:228208129-228378874	1	+	228211783	228378795	0	105	56,1006,270,261,309,267,282,276,276,276,276,276,276,276,276,276,276,279,267,270,267,267,113,154,105,267,270,267,267,267,273,267,267,273,267,267,264,264,264,264,264,264,264,267,267,273,273,197,76,273,276,288,282,371,871,279,79,125,198,33,99,219,61,71,123,140,201,83,174,157,117,165,159,178,114,168,103,130,112,180,97,125,113,169,82,201,61,78,173,27,153,46,78,2059,81,111,168,123,171,82,240,224,76,150,257,	0,3636,5311,6044,6660,7433,8291,8883,16329,35053,36166,37283,38398,41835,48521,55986,60400,65640,66048,66442,67630,68320,68800,69030,69624,70559,71045,71691,72049,72400,73803,74888,75373,77948,78643,79564,79931,80495,83768,84393,85223,86022,86650,98242,98771,99129,99981,100969,101354,107717,108579,109334,109762,110754,113214,115198,124730,125069,125453,126382,126685,126950,127661,128070,128874,129114,129814,130160,130723,131815,132376,132594,132965,133307,133989,141760,142711,143191,144821,154446,156851,157306,157944,158270,158678,158845,159756,160209,160592,161006,161812,162063,162549,162893,165802,166184,166455,167572,167878,168663,168922,169359,169801,170141,170488,
#Partially deleted in new
chr1	228208129	228378874	chr1:228208129-228378874	3	+	228211783	228378795	789624	116	56,1006,270,261,309,267,282,276,276,276,276,276,276,276,276,276,276,276,276,297,276,279,267,270,267,267,113,154,162,105,267,270,267,267,267,273,267,267,273,267,267,264,264,264,264,264,264,264,264,264,264,264,264,264,267,267,273,273,197,76,273,276,288,282,371,871,279,79,125,198,33,99,219,61,71,123,140,201,83,174,157,117,165,159,178,114,168,103,130,112,180,97,125,113,169,82,201,61,78,173,27,153,46,78,2059,81,111,168,123,171,82,240,224,70,150,257,	0,3636,5311,6044,6660,7433,8291,8883,11194,16329,35053,36166,37283,38398,41835,48521,51371,55986,60400,63795,65142,65640,66048,66442,67630,68320,68800,69030,69375,69624,70559,71045,71691,72049,72400,73803,74888,75373,77948,78643,79564,79931,80495,83768,84393,85223,86022,86650,90324,91129,91752,95545,96173,96993,98242,98771,99129,99981,100969,101354,107717,108579,109334,109762,110754,113214,115198,124730,125069,125453,126382,126685,126950,127661,128070,128874,129114,129814,130160,130723,131815,132376,132594,132965,133307,133989,141760,142711,143191,144821,154446,156851,157306,157944,158270,158678,158845,159756,160209,160592,161006,161812,162063,162549,162893,165802,166184,166455,167572,167878,168663,168922,169359,169807,170141,170488,
#Partially deleted in new
chr1	228211783	228378795	chr1:228211783-228378795	1	+	228211783	228378795	789624	115	988,270,261,309,267,282,276,276,276,276,276,276,276,276,276,276,276,276,297,276,279,267,270,267,267,113,154,162,105,267,270,267,267,267,273,267,267,273,267,267,264,264,264,264,264,264,264,264,264,264,264,264,264,267,267,273,273,197,76,273,276,288,282,371,871,279,79,125,198,33,99,219,61,71,123,140,201,83,174,157,117,165,159,178,114,168,103,130,112,180,97,125,113,169,82,201,61,78,173,27,153,46,78,2059,81,111,168,123,171,82,240,224,70,150,178,	0,1657,2390,3006,3779,4637,5229,7540,12675,31399,32512,33629,34744,38181,44867,47717,52332,56746,60141,61488,61986,62394,62788,63976,64666,65146,65376,65721,65970,66905,67391,68037,68395,68746,70149,71234,71719,74294,74989,75910,76277,76841,80114,80739,81569,82368,82996,86670,87475,88098,91891,92519,93339,94588,95117,95475,96327,97315,97700,104063,104925,105680,106108,107100,109560,111544,121076,121415,121799,122728,123031,123296,124007,124416,125220,125460,126160,126506,127069,128161,128722,128940,129311,129653,130335,138106,139057,139537,141167,150792,153197,153652,154290,154616,155024,155191,156102,156555,156938,157352,158158,158409,158895,159239,162148,162530,162801,163918,164224,165009,165268,165705,166153,166487,166834,
#Partially deleted in new
chr1	228211783	228378795	chr1:228211783-228378795	1	+	228211783	228378795	0	104	988,270,261,309,267,282,276,276,276,276,276,276,276,276,276,276,279,267,270,267,267,113,154,105,267,270,267,267,267,273,267,267,273,267,267,264,264,264,264,264,264,264,267,267,273,273,197,76,273,276,288,282,371,871,279,79,125,198,33,99,219,61,71,123,140,201,83,174,157,117,165,159,178,114,168,103,130,112,180,97,125,113,169,82,201,61,78,173,27,153,46,78,2059,81,111,168,123,171,82,240,224,76,150,178,	0,1657,2390,3006,3779,4637,5229,12675,31399,32512,33629,34744,38181,44867,52332,56746,61986,62394,62788,63976,64666,65146,65376,65970,66905,67391,68037,68395,68746,70149,71234,71719,74294,74989,75910,76277,76841,80114,80739,81569,82368,82996,94588,95117,95475,96327,97315,97700,104063,104925,105680,106108,107100,109560,111544,121076,121415,121799,122728,123031,123296,124007,124416,125220,125460,126160,126506,127069,128161,128722,128940,129311,129653,130335,138106,139057,139537,141167,150792,153197,153652,154290,154616,155024,155191,156102,156555,156938,157352,158158,158409,158895,159239,162148,162530,162801,163918,164224,165009,165268,165705,166147,166487,166834,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	228215688	228217427	chr1:228215688-228217427	0	+	228215688	228215688	8553170	4	141,282,276,33,	0,732,1324,1706,
#Deleted in new
chr1	228270442	228274397	chr1:228270442-228274397	3	-	228270442	228270442	8553170	1	3955,	0,
#Deleted in new
chr1	228274583	228276066	chr1:228274583-228276066	3	-	228274583	228274583	8553170	1	1483,	0,
#Deleted in new
chr1	228274868	228276046	chr1:228274868-228276046	1	-	228274868	228274868	8553170	2	202,348,	0,830,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	228277177	228284204	chr1:228277177-228284204	0	+	228277177	228283798	789624	11	136,162,105,267,270,267,267,267,273,267,702,	0,327,576,1511,1997,2643,3001,3352,4755,5840,6325,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	228280207	228284991	chr1:228280207-228284991	0	+	228280207	228280207	8553170	5	238,267,273,267,1489,	0,322,1725,2810,3295,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	228280772	228356903	chr1:228280772-228356903	0	+	228280772	228356903	789624	20	24,273,267,267,273,267,267,264,264,264,264,264,264,264,264,264,264,264,151,86,	0,1160,2245,2730,5305,6000,6921,7288,7852,11125,11750,12580,13379,14007,17681,18486,19109,22902,23530,76045,
#Deleted in new
chr1	228294194	228295141	chr1:228294194-228295141	0	+	228294194	228294194	8553170	2	221,362,	0,585,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	228295910	228302998	chr1:228295910-228302998	3	-	228295910	228295910	8553170	2	154,610,	0,6478,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	228299815	228302082	chr1:228299815-228302082	0	+	228299815	228299815	8553170	1	2267,	0,
#Deleted in new
chr1	228303608	228304344	chr1:228303608-228304344	0	+	228303608	228303608	8553170	2	330,42,	0,694,
#Partially deleted in new
chr1	228334881	228378874	chr1:228334881-228378874	0	+	228334881	228378795	789624	45	32,219,61,71,123,140,201,83,174,160,117,165,159,178,114,168,103,130,112,180,97,125,113,169,82,201,61,78,173,27,153,46,78,2059,81,111,168,123,171,82,240,224,76,150,257,	0,198,909,1318,2122,2362,3062,3408,3971,5060,5624,5842,6213,6555,7237,15008,15959,16439,18069,27694,30099,30554,31192,31518,31926,32093,33004,33457,33840,34254,35060,35311,35797,36141,39050,39432,39703,40820,41126,41911,42170,42607,43049,43389,43736,
#Partially deleted in new
chr1	228353033	228361250	chr1:228353033-228361250	0	+	228353033	228356327	789624	3	29,194,1654,	0,3117,6563,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	228384113	228385016	chr1:228384113-228385016	3	-	228384113	228384113	8553170	2	346,228,	0,675,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	228393672	228405904	chr1:228393672-228405904	1	-	228394704	228402194	789624	5	1580,101,23,231,3839,	0,3274,3470,7291,8393,
#Partially deleted in new
chr1	228393675	228406840	chr1:228393675-228406840	3	-	228394704	228406561	789624	6	1577,101,23,231,96,687,	0,3271,3467,7288,8390,12478,
#Partially deleted in new
chr1	228394289	228396967	chr1:228394289-228396967	3	+	228394289	228394289	8553170	3	159,96,225,	0,1421,2453,
#Partially deleted in new
chr1	228394824	228406187	chr1:228394824-228406187	0	-	228394824	228406187	789624	5	428,101,23,96,34,	0,2122,2318,7241,11329,
#Partially deleted in new
chr1	228395207	228397689	chr1:228395207-228397689	0	-	228395207	228395207	8553170	3	45,101,547,	0,1739,1935,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	228395533	228406800	chr1:228395533-228406800	1	-	228396647	228406561	789624	5	1514,23,231,96,647,	0,1609,5430,6532,10620,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	228396612	228406186	chr1:228396612-228406186	0	-	228397033	228406186	789624	2	553,33,	0,9541,
#Deleted in new
chr1	228397047	228397109	chr1:228397047-228397109	3	-	228397047	228397047	5263520	1	62,	0,
#Deleted in new
chr1	228407380	228409694	chr1:228407380-228409694	3	+	228407380	228407380	8553170	3	98,87,98,	0,1156,2216,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	228407939	228416029	chr1:228407939-228416029	1	-	228408200	228415072	789624	6	812,104,23,231,96,1386,	0,1232,1449,3006,5857,6704,
#Partially deleted in new
chr1	228408035	228416664	chr1:228408035-228416664	3	-	228408200	228415072	789624	7	716,104,23,231,96,434,126,	0,1136,1353,2910,5761,6608,8503,
#Partially deleted in new
chr1	228408035	228416646	chr1:228408035-228416646	1	-	228408200	228415072	789624	7	716,104,23,231,96,470,108,	0,1136,1353,2910,5761,6608,8503,
#Partially deleted in new
chr1	228408699	228416757	chr1:228408699-228416757	1	-	228409022	228415072	789624	6	576,23,231,96,434,371,	0,689,2246,5097,5944,7687,
#Partially deleted in new
chr1	228409171	228416653	chr1:228409171-228416653	0	-	228409171	228414991	789624	6	104,23,231,96,356,115,	0,217,1774,4625,5472,7367,
#Partially deleted in new
chr1	228413795	228416627	chr1:228413795-228416627	0	-	228413795	228415072	789624	3	97,470,241,	0,848,2591,
#Partially deleted in new
chr1	228414899	228416861	chr1:228414899-228416861	0	-	228414899	228414991	789624	2	100,475,	0,1487,
#Partially deleted in new
chr1	228414920	228416652	chr1:228414920-228416652	0	-	228414920	228415072	789624	2	285,266,	0,1466,
#Deleted in new
chr1	228424844	228425325	chr1:228424844-228425325	3	-	228424914	228425325	0	1	481,	0,
#Partially deleted in new
chr1	228449162	228449621	chr1:228449162-228449621	7	-	228449162	228449162	16724991	1	459,	0,
#Deleted in new
chr1	228456978	228457873	chr1:228456978-228457873	3	-	228457424	228457817	789624	1	895,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	228458106	228460470	chr1:228458106-228460470	3	+	228458129	228458510	0	1	2364,	0,
#Deleted in new
chr1	228462073	228462152	chr1:228462073-228462152	3	+	228462073	228462073	5263520	1	79,	0,
#Deleted in new
chr1	228464102	228464626	chr1:228464102-228464626	7	-	228464102	228464102	16724991	1	524,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	228486187	228487120	chr1:228486187-228487120	3	-	228486187	228486187	8553170	1	933,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	228487060	228495766	chr1:228487060-228495766	1	+	228487488	228493885	789624	4	818,93,222,1884,	0,1899,5992,6822,
#Partially deleted in new
chr1	228487488	228493885	chr1:228487488-228493885	3	+	228487488	228493885	789624	4	390,93,222,3,	0,1471,5564,6394,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	228488221	228495766	chr1:228488221-228495766	0	+	228488221	228488221	8553170	4	264,97,222,1884,	0,738,4831,5661,
#Partially deleted in new
chr1	228510424	228512305	chr1:228510424-228512305	7	-	228510424	228510424	16724991	3	254,354,87,	0,1226,1794,
#Partially deleted in new
chr1	228510535	228512250	chr1:228510535-228512250	4	-	228510535	228510535	16724991	3	143,354,68,	0,1115,1647,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	228555792	228555901	chr1:228555792-228555901	7	+	228555792	228555792	16724991	1	109,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	228647911	228648032	chr1:228647911-228648032	7	-	228647911	228647911	16724991	1	121,	0,
#Partially deleted in new
chr1	228650240	228651379	chr1:228650240-228651379	7	+	228650240	228650240	16724991	1	1139,	0,
#Partially deleted in new
chr1	228652435	228652560	chr1:228652435-228652560	3	+	228652435	228652435	8553170	1	125,	0,
#Deleted in new
chr1	228687414	228687826	chr1:228687414-228687826	7	+	228687414	228687414	16724991	1	412,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	228735076	228746669	chr1:228735076-228746669	3	+	228735742	228743740	0	3	928,59,3385,	0,2596,8208,
#Deleted in new
chr1	228776311	228776865	chr1:228776311-228776865	7	+	228776311	228776311	16724991	1	554,	0,
#Deleted in new
chr1	228858009	228858556	chr1:228858009-228858556	7	+	228858009	228858009	16724991	1	547,	0,
#Partially deleted in new
chr1	229022772	229038274	chr1:229022772-229038274	3	-	229022772	229022772	8553170	4	179,144,85,251,	0,14508,15079,15251,
#Deleted in new
chr1	229042170	229042591	chr1:229042170-229042591	7	+	229042170	229042170	16724991	1	421,	0,
#Partially deleted in new
chr1	229092814	229094905	chr1:229092814-229094905	3	-	229092814	229092814	8553170	2	474,125,	0,1966,
#Partially deleted in new
chr1	229223460	229227562	chr1:229223460-229227562	3	-	229223460	229223460	8553170	2	490,302,	0,3800,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	229249635	229251810	chr1:229249635-229251810	3	+	229249635	229249635	8553170	1	2175,	0,
#Partially deleted in new
chr1	229258280	229271003	chr1:229258280-229271003	3	-	229258280	229258280	8553170	2	840,28,	0,12695,
#Partially deleted in new
chr1	229269365	229271028	chr1:229269365-229271028	0	-	229269365	229269365	8553170	2	262,53,	0,1610,
#Partially deleted in new
chr1	229271061	229305891	chr1:229271061-229305891	1	+	229295897	229302977	789624	6	309,63,117,96,128,2086,	0,24786,26458,27915,31800,32744,
#Partially deleted in new
chr1	229271074	229288882	chr1:229271074-229288882	0	+	229271074	229271074	8553170	3	296,81,154,	0,15411,17654,
#Partially deleted in new
chr1	229271131	229305894	chr1:229271131-229305894	3	+	229271339	229302977	0	8	239,81,115,63,155,96,128,2089,	0,15354,17597,24716,26350,27845,31730,32674,
#Partially deleted in new
chr1	229271193	229303894	chr1:229271193-229303894	0	+	229271193	229271193	8553170	6	177,63,155,96,128,89,	0,24654,26288,27783,31668,32612,
#Deleted in new
chr1	229286484	229289199	chr1:229286484-229289199	0	+	229286484	229286484	8553170	3	82,115,234,	0,2244,2481,
#Deleted in new
chr1	229304856	229305504	chr1:229304856-229305504	3	+	229305134	229305326	789624	1	648,	0,
#Partially deleted in new
chr1	229319402	229323087	chr1:229319402-229323087	3	+	229319402	229319402	8553170	2	494,146,	0,3539,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	229321004	229342941	chr1:229321004-229342941	3	-	229325234	229342465	789624	4	4407,269,415,30,	0,5733,21094,21907,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	229321010	229342517	chr1:229321010-229342517	1	-	229325234	229342465	789624	3	4401,269,419,	0,5727,21088,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	229321514	229340633	chr1:229321514-229340633	1	-	229325234	229340425	789624	3	3897,269,233,	0,5223,18886,
#Partially deleted in new
chr1	229323538	229343294	chr1:229323538-229343294	0	-	229323538	229323538	8553170	4	1873,821,415,383,	0,3199,18560,19373,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	229383127	229383188	chr1:229383127-229383188	3	+	229383127	229383127	8553170	1	61,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	229410499	229410767	chr1:229410499-229410767	3	-	229410499	229410499	8553170	1	268,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	229425019	229425650	chr1:229425019-229425650	7	+	229425019	229425019	16724991	2	46,304,	0,327,
#Deleted in new
chr1	229431244	229434094	chr1:229431244-229434094	3	-	229431498	229433115	789624	7	398,182,192,162,325,141,91,	0,476,749,1025,1311,1742,2759,
#Deleted in new
chr1	229431248	229434098	chr1:229431248-229434098	1	-	229431498	229433115	789624	6	394,142,25,325,141,95,	0,472,1158,1307,1738,2755,
#Partially deleted in new
chr1	229440259	229508341	chr1:229440259-229508341	3	-	229441903	229508249	0	26	1781,89,65,81,119,136,159,134,252,100,123,225,95,164,92,158,148,148,71,156,171,135,108,104,119,274,	0,4654,8866,10265,12265,17901,20351,23283,24364,25160,26374,30320,35378,37337,43794,46111,47206,49695,55235,55632,57876,59424,60496,61739,65780,67808,
#Partially deleted in new
chr1	229440283	229441020	chr1:229440283-229441020	3	-	229440283	229440283	8553170	2	283,195,	0,542,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	229441778	229450751	chr1:229441778-229450751	0	-	229441778	229441778	8553170	4	262,89,65,227,	0,3135,7347,8746,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	229448771	229451070	chr1:229448771-229451070	0	-	229448771	229448771	8553170	2	419,546,	0,1753,
#Partially deleted in new
chr1	229499166	229508326	chr1:229499166-229508326	0	-	229499166	229499166	8553170	6	54,135,108,104,119,259,	0,517,1589,2832,6873,8901,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	229508500	229514272	chr1:229508500-229514272	3	+	229508500	229508500	789624	3	179,117,295,	0,1623,5477,
#Partially deleted in new
chr1	229516581	229558695	chr1:229516581-229558695	3	-	229518178	229558652	0	13	1829,35,44,181,80,210,96,136,147,135,203,201,560,	0,2259,5010,9354,10647,13617,15054,22874,24024,25655,30917,32652,41554,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	229517796	229519103	chr1:229517796-229519103	0	-	229517796	229517796	8553170	2	614,263,	0,1044,
#Partially deleted in new
chr1	229526061	229531902	chr1:229526061-229531902	0	-	229526061	229526061	8553170	4	55,80,210,267,	0,1167,4137,5574,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	229535063	229535189	chr1:229535063-229535189	3	-	229535063	229535063	8553170	1	126,	0,
#Deleted in new
chr1	229570531	229570796	chr1:229570531-229570796	7	+	229570531	229570531	16724991	1	265,	0,
#Partially deleted in new
chr1	229593110	229614482	chr1:229593110-229614482	1	-	229594296	229614482	789624	4	1984,725,105,142,	0,9084,16995,21230,
#Partially deleted in new
chr1	229593120	229626047	chr1:229593120-229626047	3	-	229594296	229614482	789624	5	1974,725,105,145,163,	0,9074,16985,21220,32764,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	229599193	229625970	chr1:229599193-229625970	1	-	229602188	229614482	789624	4	3726,105,145,86,	0,10912,15147,26691,
#Partially deleted in new
chr1	229606833	229626038	chr1:229606833-229626038	0	-	229606833	229606833	8553170	5	43,62,105,145,154,	0,940,3272,7507,19051,
#Partially deleted in new
chr1	229614156	229626047	chr1:229614156-229626047	1	-	229614227	229614482	789624	2	329,163,	0,11728,
#Partially deleted in new
chr1	229626233	229660199	chr1:229626233-229660199	3	+	229627633	229659297	789624	10	123,139,177,3331,161,111,243,88,140,1100,	0,1387,6035,8683,17299,19625,21276,25001,28015,32866,
#Partially deleted in new
chr1	229650846	229659126	chr1:229650846-229659126	0	+	229651237	229659126	789624	3	476,140,27,	0,3402,8253,
#Partially deleted in new
chr1	229688998	229689904	chr1:229688998-229689904	7	-	229688998	229688998	16724991	1	906,	0,
#Deleted in new
chr1	229705233	229705861	chr1:229705233-229705861	7	-	229705233	229705233	16724991	1	628,	0,
#Partially deleted in new
chr1	229875549	229885752	chr1:229875549-229885752	3	-	229875549	229875549	8553170	2	172,213,	0,9990,
#Partially deleted in new
chr1	230002729	230007162	chr1:230002729-230007162	3	+	230002729	230002729	789624	2	264,390,	0,4043,
#Partially deleted in new
chr1	230057989	230243427	chr1:230057989-230243427	0	+	230057989	230057989	8553170	7	89,94,154,99,68,66,122,	0,120228,145147,178024,178363,178670,185316,
#Partially deleted in new
chr1	230067208	230282124	chr1:230067208-230282124	3	+	230067280	230279458	0	16	198,94,154,99,68,66,122,88,88,104,127,93,84,127,120,2822,	0,111009,135928,168805,169144,169451,176097,178854,181975,183248,188009,195364,195713,198032,207236,212094,
#Partially deleted in new
chr1	230067258	230092033	chr1:230067258-230092033	0	+	230067258	230067258	789624	2	148,445,	0,24330,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	230255357	230282120	chr1:230255357-230282120	0	+	230255357	230255357	8553170	6	81,800,84,127,120,2818,	0,6508,7564,9883,19087,23945,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	230258693	230268483	chr1:230258693-230268483	3	-	230258693	230258693	8553170	3	394,286,181,	0,784,9609,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	230261950	230264972	chr1:230261950-230264972	0	+	230261950	230261950	8553170	2	715,2051,	0,971,
#Deleted in new
chr1	230280311	230281893	chr1:230280311-230281893	3	-	230280311	230280311	8553170	2	625,404,	0,1178,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	230314481	230426371	chr1:230314481-230426371	3	-	230323424	230425928	789624	7	9139,106,198,181,135,428,774,	0,10828,18362,22626,36476,42412,111116,
#Partially deleted in new
chr1	230323247	230377645	chr1:230323247-230377645	1	-	230323424	230377621	789624	7	373,106,198,181,135,428,148,	0,2062,9596,13860,27710,33646,54250,
#Partially deleted in new
chr1	230323541	230336295	chr1:230323541-230336295	0	-	230323541	230323541	8553170	4	79,106,198,195,	0,1768,9302,12559,
#Partially deleted in new
chr1	230426490	230436822	chr1:230426490-230436822	3	+	230426490	230426490	8553170	2	275,265,	0,10067,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	230592659	230595583	chr1:230592659-230595583	3	-	230592659	230592659	5263520	2	181,222,	0,2702,
#Deleted in new
chr1	230612008	230612412	chr1:230612008-230612412	7	-	230612008	230612008	16724991	1	404,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	230642488	230683428	chr1:230642488-230683428	0	+	230642488	230642488	8553170	10	190,162,66,81,104,109,196,2285,127,4516,	0,16975,18269,20652,21995,26187,26438,26867,32509,36424,
#Partially deleted in new
chr1	230642491	230693982	chr1:230642491-230693982	3	+	230642606	230693393	789624	18	187,162,66,81,104,109,180,125,127,140,62,152,198,73,143,140,181,691,	0,16972,18266,20649,21992,26184,26864,29024,32506,36421,41082,42593,44443,45579,45928,47522,48892,50800,
#Partially deleted in new
chr1	230642504	230693625	chr1:230642504-230693625	0	+	230642606	230661399	789624	19	174,162,66,233,81,104,109,180,125,127,140,62,152,198,73,143,140,181,334,	0,16959,18253,18820,20636,21979,26171,26851,29011,32493,36408,41069,42580,44430,45566,45915,47509,48879,50787,
#Partially deleted in new
chr1	230642520	230660873	chr1:230642520-230660873	0	+	230642520	230642520	8553170	3	158,162,116,	0,16943,18237,
#Partially deleted in new
chr1	230642566	230693982	chr1:230642566-230693982	1	+	230642606	230693393	789624	18	112,162,66,81,104,109,180,125,127,140,62,152,198,73,140,140,181,691,	0,16897,18191,20574,21917,26109,26789,28949,32431,36346,41007,42518,44368,45504,45856,47447,48817,50725,
#Partially deleted in new
chr1	230642810	230693981	chr1:230642810-230693981	1	+	230659568	230693393	789624	18	230,162,66,81,104,109,180,125,127,140,62,152,198,73,143,140,181,690,	0,16653,17947,20330,21673,25865,26545,28705,32187,36102,40763,42274,44124,45260,45609,47203,48573,50481,
#Deleted in new
chr1	230684322	230688528	chr1:230684322-230688528	0	+	230684322	230684322	8553170	5	118,152,198,73,109,	0,762,2612,3748,4097,
#Partially deleted in new
chr1	230687989	230690319	chr1:230687989-230690319	0	+	230687989	230687989	8553170	2	573,306,	0,2024,
#Deleted in new
chr1	230689960	230691819	chr1:230689960-230691819	0	+	230689960	230689960	8553170	2	193,436,	0,1423,
#Partially deleted in new
chr1	230702522	230714297	chr1:230702522-230714297	3	-	230703140	230710850	0	5	807,145,268,859,212,	0,1670,3410,7472,11563,
#Partially deleted in new
chr1	230710697	230795492	chr1:230710697-230795492	3	-	230710697	230710697	8553170	2	156,380,	0,84415,
#Partially deleted in new
chr1	230747383	230801772	chr1:230747383-230801772	3	+	230747496	230801596	0	20	326,70,119,134,169,84,86,78,161,158,209,37,81,58,65,69,79,117,59,203,	0,7953,12128,15269,20157,21796,24630,27170,31589,32795,33116,38597,40138,42748,44480,45042,45466,47779,50778,54186,
#Partially deleted in new
chr1	230747383	230801772	chr1:230747383-230801772	1	+	230747496	230801596	789624	18	326,134,169,84,86,78,161,158,209,37,81,58,65,69,79,117,59,203,	0,15269,20157,21796,24630,27170,31589,32795,33116,38597,40138,42748,44480,45042,45466,47779,50778,54186,
#Partially deleted in new
chr1	230747414	230802003	chr1:230747414-230802003	1	+	230747496	230801596	0	19	295,70,119,134,169,84,86,161,158,209,37,81,58,65,69,79,117,59,434,	0,7922,12097,15238,20126,21765,24599,31558,32764,33085,38566,40107,42717,44449,45011,45435,47748,50747,54155,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	230776080	230795153	chr1:230776080-230795153	1	-	230776080	230776080	8553170	3	668,141,41,	0,769,19032,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	230776100	230795137	chr1:230776100-230795137	1	-	230776100	230776100	8553170	2	648,25,	0,19012,
#Partially deleted in new
chr1	230791876	230801762	chr1:230791876-230801762	0	+	230791876	230791876	8553170	5	52,69,79,117,193,	0,549,973,3286,9693,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	230823640	230824707	chr1:230823640-230824707	3	-	230823640	230823640	8553170	2	267,44,	0,1023,
#Partially deleted in new
chr1	230837118	230868653	chr1:230837118-230868653	3	-	230839851	230868512	789624	4	2790,543,51,474,	0,6235,18549,31061,
#Partially deleted in new
chr1	230837118	230869589	chr1:230837118-230869589	1	-	230839851	230868398	789624	6	2790,543,51,223,104,108,	0,6235,18549,31061,31693,32363,
#Partially deleted in new
chr1	230837119	230869316	chr1:230837119-230869316	1	-	230839851	230843629	789624	4	2789,504,104,269,	0,6234,31692,31928,
#Partially deleted in new
chr1	230839620	230856036	chr1:230839620-230856036	1	-	230839851	230843890	789624	4	288,543,51,159,	0,3733,16047,16257,
#Partially deleted in new
chr1	230843670	230868998	chr1:230843670-230868998	0	-	230843670	230868383	789624	4	226,51,211,187,	0,11997,24509,25141,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	230843836	230856134	chr1:230843836-230856134	0	-	230843836	230843836	8553170	2	60,467,	0,11831,
#Deleted in new
chr1	230868442	230869570	chr1:230868442-230869570	0	-	230868442	230868442	8553170	2	473,523,	0,605,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	230874845	230879015	chr1:230874845-230879015	3	+	230874845	230874845	789624	3	310,260,224,	0,460,3946,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	230894140	230894427	chr1:230894140-230894427	3	+	230894140	230894140	8553170	1	287,	0,
#Partially deleted in new
chr1	230906242	230978838	chr1:230906242-230978838	3	-	230906904	230978830	789624	23	777,80,79,80,136,110,85,84,93,133,131,157,175,142,83,111,117,93,66,71,76,95,279,	0,2469,2699,5227,6380,9950,14267,15178,17598,18598,19274,22694,25055,25493,27536,33143,34197,37563,39146,48090,51981,54966,72317,
#Partially deleted in new
chr1	230906242	230978859	chr1:230906242-230978859	1	-	230906904	230978830	789624	21	777,80,79,80,136,107,85,84,93,133,131,157,175,142,83,111,117,71,76,95,300,	0,2469,2699,5227,6380,9950,14267,15178,17598,18598,19274,22694,25055,25493,27536,33143,34197,48090,51981,54966,72317,
#Partially deleted in new
chr1	230911376	230921506	chr1:230911376-230921506	0	-	230911376	230911376	8553170	5	173,136,107,85,86,	0,1246,4816,9133,10044,
#Partially deleted in new
chr1	230920302	230924863	chr1:230920302-230924863	0	-	230920422	230924863	789624	4	292,84,93,23,	0,1118,3538,4538,
#Partially deleted in new
chr1	230931417	230978875	chr1:230931417-230978875	0	-	230933830	230978830	789624	9	55,142,83,107,117,71,76,95,316,	0,318,2361,4740,9022,22915,26806,29791,47142,
#Partially deleted in new
chr1	230933782	230978796	chr1:230933782-230978796	0	-	230933782	230978796	789624	5	79,71,76,95,237,	0,20550,24441,27426,44777,
#Deleted in new
chr1	230933815	230936637	chr1:230933815-230936637	0	-	230933815	230933815	8553170	2	46,480,	0,2342,
#Partially deleted in new
chr1	230939457	230978861	chr1:230939457-230978861	0	-	230939457	230978830	789624	4	39,117,71,302,	0,982,14875,39102,
#Partially deleted in new
chr1	230940508	230978835	chr1:230940508-230978835	0	-	230956549	230978830	789624	8	48,93,66,71,140,76,95,276,	0,3297,4880,13824,15912,17715,20700,38051,
#Partially deleted in new
chr1	230978980	230997154	chr1:230978980-230997154	0	+	230978980	230978980	8553170	5	539,120,154,225,34,	0,9339,11129,16779,18140,
#Partially deleted in new
chr1	230979048	231000595	chr1:230979048-231000595	3	+	230979105	230997263	789624	6	231,120,154,225,147,458,	0,9271,11061,16711,18072,21089,
#Partially deleted in new
chr1	230979093	231000595	chr1:230979093-231000595	1	+	230979105	230997263	789624	5	186,154,225,147,458,	0,11016,16666,18027,21044,
#Partially deleted in new
chr1	230979110	230999867	chr1:230979110-230999867	0	+	230979154	230997263	789624	6	146,120,154,225,147,245,	0,9209,10999,16649,18010,20512,
#Partially deleted in new
chr1	230979115	230999803	chr1:230979115-230999803	0	+	230979115	230997263	789624	6	164,120,154,225,147,181,	0,9204,10994,16644,18005,20507,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	230979145	230997267	chr1:230979145-230997267	0	+	230979145	230997263	789624	6	134,120,154,99,225,147,	0,9174,10964,11454,16614,17975,
#Partially deleted in new
chr1	230995759	231000595	chr1:230995759-231000595	0	+	230995759	230997263	789624	4	225,147,179,458,	0,1361,3863,4378,
#Partially deleted in new
chr1	231018957	231040246	chr1:231018957-231040246	3	-	231019862	231040211	789624	2	1169,326,	0,20963,
#Partially deleted in new
chr1	231019175	231026949	chr1:231019175-231026949	0	-	231019175	231019175	8553170	3	951,68,557,	0,6823,7217,
#Partially deleted in new
chr1	231019417	231028732	chr1:231019417-231028732	0	-	231019417	231019417	8553170	2	709,274,	0,9041,
#Deleted in new
chr1	231019827	231019924	chr1:231019827-231019924	3	-	231019827	231019827	5263520	1	97,	0,
#Deleted in new
chr1	231021610	231022183	chr1:231021610-231022183	7	+	231021610	231021610	16724991	1	573,	0,
#Deleted in new
chr1	231117830	231118325	chr1:231117830-231118325	7	-	231117830	231117830	16724991	1	495,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	231162111	231221556	chr1:231162111-231221556	1	+	231162969	231215440	789624	10	1902,96,123,111,154,146,139,304,163,6182,	0,35259,36935,38036,39246,41755,44540,46835,51703,53263,
#Partially deleted in new
chr1	231162969	231217024	chr1:231162969-231217024	3	+	231162969	231215440	789624	10	1044,96,123,111,160,146,139,304,163,1650,	0,34401,36077,37178,38388,40897,43682,45977,50845,52405,
#Partially deleted in new
chr1	231162969	231215440	chr1:231162969-231215440	1	+	231162969	231215440	789624	12	121,509,228,96,123,111,160,146,139,304,163,66,	0,241,816,34401,36077,37178,38388,40897,43682,45977,50845,52405,
#Partially deleted in new
chr1	231184097	231187627	chr1:231184097-231187627	3	-	231184097	231184097	8553170	3	1139,98,111,	0,1978,3419,
#Partially deleted in new
chr1	231223762	231241170	chr1:231223762-231241170	1	-	231225466	231241141	789624	6	1761,87,96,60,332,147,	0,2976,3210,5387,15094,17261,
#Partially deleted in new
chr1	231223762	231241167	chr1:231223762-231241167	3	-	231224278	231241141	789624	7	652,53,87,96,60,332,144,	0,1708,2976,3210,5387,15094,17261,
#Partially deleted in new
chr1	231223762	231241178	chr1:231223762-231241178	1	-	231224278	231241141	789624	7	652,53,87,96,57,332,155,	0,1708,2976,3210,5387,15094,17261,
#Partially deleted in new
chr1	231224254	231241090	chr1:231224254-231241090	0	-	231224278	231241090	789624	6	160,53,87,96,332,67,	0,1216,2484,2718,14602,16769,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	231224314	231225922	chr1:231224314-231225922	0	-	231224314	231224314	8553170	2	100,452,	0,1156,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	231225502	231238893	chr1:231225502-231238893	0	-	231225502	231225502	8553170	6	21,102,87,96,57,37,	0,888,1236,1470,3647,13354,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	231226385	231229209	chr1:231226385-231229209	0	-	231226385	231226385	8553170	3	440,96,60,	0,587,2764,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	231236695	231241187	chr1:231236695-231241187	0	-	231236695	231236695	8553170	2	2493,164,	0,4328,
#Partially deleted in new
chr1	231241206	231266091	chr1:231241206-231266091	0	+	231241378	231266091	789624	6	250,177,130,128,76,78,	0,19300,21516,24086,24505,24807,
#Partially deleted in new
chr1	231241209	231277973	chr1:231241209-231277973	3	+	231241378	231277542	789624	16	247,183,177,130,128,76,152,131,224,243,80,141,100,94,62,475,	0,9751,19297,21513,24083,24502,24804,25067,26470,29548,31102,32712,34011,34195,34925,36289,
#Partially deleted in new
chr1	231241215	231275268	chr1:231241215-231275268	0	+	231241378	231275268	789624	13	241,183,147,130,128,76,152,131,224,243,80,141,48,	0,9745,19291,21507,24077,24496,24798,25061,26464,29542,31096,32706,34005,
#Partially deleted in new
chr1	231241215	231277933	chr1:231241215-231277933	0	+	231241378	231260559	789624	17	241,183,88,177,130,128,76,152,131,224,243,80,141,100,94,62,435,	0,9745,17006,19291,21507,24077,24496,24798,25061,26464,29542,31096,32706,34005,34189,34919,36283,
#Partially deleted in new
chr1	231266133	231270056	chr1:231266133-231270056	0	+	231266133	231266133	8553170	4	32,131,232,194,	0,143,1546,3729,
#Deleted in new
chr1	231274895	231277530	chr1:231274895-231277530	0	+	231274895	231274895	8553170	4	425,94,62,32,	0,509,1239,2603,
#Partially deleted in new
chr1	231281413	231281524	chr1:231281413-231281524	7	-	231281413	231281413	16724991	1	111,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	231332752	231337852	chr1:231332752-231337852	3	-	231335567	231337745	789624	1	5100,	0,
#Partially deleted in new
chr1	231337103	231353132	chr1:231337103-231353132	1	+	231338383	231351606	0	4	1501,100,129,1829,	0,2665,10693,14200,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	231338047	231355023	chr1:231338047-231355023	3	+	231338383	231353361	0	5	557,100,129,268,2414,	0,1721,9749,13256,14562,
#Partially deleted in new
chr1	231338255	231352521	chr1:231338255-231352521	1	+	231338383	231351606	0	3	349,100,1218,	0,1513,13048,
#Deleted in new
chr1	231338294	231340061	chr1:231338294-231340061	0	+	231338294	231338294	8553170	2	310,293,	0,1474,
#Partially deleted in new
chr1	231339426	231352764	chr1:231339426-231352764	0	+	231344705	231352764	789624	6	51,100,92,129,268,155,	0,342,5196,8370,11877,13183,
#Partially deleted in new
chr1	231347676	231352754	chr1:231347676-231352754	0	+	231347676	231347676	8553170	3	249,268,145,	0,3627,4933,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	231363750	231425044	chr1:231363750-231425044	3	-	231366410	231421888	0	5	2725,68,137,120,4047,	0,3818,6811,10229,57247,
#Partially deleted in new
chr1	231366139	231420343	chr1:231366139-231420343	0	-	231366139	231366139	8553170	5	336,68,137,120,168,	0,1429,4422,7840,54036,
#Partially deleted in new
chr1	231475955	231476288	chr1:231475955-231476288	7	-	231475955	231475955	16724991	1	333,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	231522387	231528556	chr1:231522387-231528556	0	-	231522387	231522387	8553170	3	250,78,137,	0,4950,6032,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	231522460	231528255	chr1:231522460-231528255	1	-	231522460	231522460	8553170	4	177,78,27,134,	0,4877,5305,5661,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	231522460	231528296	chr1:231522460-231528296	0	-	231522460	231522460	8553170	3	177,78,175,	0,4877,5661,
#Partially deleted in new
chr1	231527105	231528501	chr1:231527105-231528501	1	-	231527105	231527105	8553170	2	310,82,	0,1314,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	231528652	231566524	chr1:231528652-231566524	3	+	231528810	231564905	0	6	174,105,115,131,128,1997,	0,602,8560,13828,32475,35875,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	231528652	231819244	chr1:231528652-231819244	0	+	231528810	231616709	789624	13	174,105,115,131,128,263,980,70,151,130,236,55,916,	0,602,8560,13828,32475,87991,165173,173302,221273,238487,242182,266589,289676,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	231528652	231819244	chr1:231528652-231819244	0	+	231528810	231616693	789624	13	174,105,115,131,263,980,70,151,130,236,55,103,916,	0,602,8560,13828,87991,165173,173302,221273,238487,242182,266589,271455,289676,
#Partially deleted in new
chr1	231528652	231819244	chr1:231528652-231819244	0	+	231528810	231561129	789624	11	174,105,128,980,70,151,130,236,55,103,916,	0,602,32475,165173,173302,221273,238487,242182,266589,271455,289676,
#Partially deleted in new
chr1	231528652	231819244	chr1:231528652-231819244	2	+	231528810	231693897	789624	13	174,105,115,131,128,980,70,151,130,236,55,103,916,	0,602,8560,13828,32475,165173,173302,221273,238487,242182,266589,271455,289676,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	231528652	231819244	chr1:231528652-231819244	1	+	231528810	231616709	789624	14	174,105,115,131,128,263,980,70,151,130,236,55,103,916,	0,602,8560,13828,32475,87991,165173,173302,221273,238487,242182,266589,271455,289676,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	231528652	231819244	chr1:231528652-231819244	0	+	231528810	231616693	789624	13	174,105,115,131,263,980,70,151,130,236,55,103,916,	0,602,8560,13828,87991,165173,173302,221273,238487,242182,266589,271455,289676,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	231528652	231818517	chr1:231528652-231818517	0	+	231528810	231616693	789624	12	174,105,115,131,263,980,70,151,130,236,103,189,	0,602,8560,13828,87991,165173,173302,221273,238487,242182,271455,289676,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	231528652	231750619	chr1:231528652-231750619	0	+	231528810	231616693	789624	8	174,105,115,131,263,107,980,694,	0,602,8560,13828,87991,89300,165173,221273,
#Partially deleted in new
chr1	231528654	231561229	chr1:231528654-231561229	0	+	231528810	231561229	789624	5	172,105,115,152,102,	0,600,8558,13805,32473,
#Partially deleted in new
chr1	231528666	231554694	chr1:231528666-231554694	0	+	231528666	231528666	8553170	5	160,105,115,131,74,	0,588,8546,13814,25954,
#Partially deleted in new
chr1	231529262	231542849	chr1:231529262-231542849	0	+	231529262	231529262	8553170	3	97,115,369,	0,7950,13218,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	231534119	231566524	chr1:231534119-231566524	0	+	231534119	231534119	8553170	5	3208,131,128,165,1997,	0,8361,27008,29345,30408,
#Partially deleted in new
chr1	231591291	231612090	chr1:231591291-231612090	3	-	231591291	231591291	789624	2	509,88,	0,20711,
#Partially deleted in new
chr1	231626814	231819244	chr1:231626814-231819244	0	+	231626867	231800117	789624	8	120,980,70,151,130,236,103,916,	0,67011,75140,123111,140325,144020,173293,191514,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	231626814	231724074	chr1:231626814-231724074	1	+	231626867	231722601	0	3	120,980,1536,	0,67011,95724,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	231626814	231855380	chr1:231626814-231855380	0	+	231626867	231767171	789624	9	120,980,70,130,236,55,103,189,642,	0,67011,75140,140325,144020,168427,173293,191514,227924,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	231626814	231855380	chr1:231626814-231855380	1	+	231626867	231855025	0	10	120,980,70,151,130,236,55,103,189,642,	0,67011,75140,123111,140325,144020,168427,173293,191514,227924,
#Partially deleted in new
chr1	231626814	231866712	chr1:231626814-231866712	3	+	231626867	231866578	0	10	120,980,70,151,130,236,55,103,189,190,	0,67011,75140,123111,140325,144020,168427,173293,191514,239708,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	231626814	232041127	chr1:231626814-232041127	1	+	231626867	232036831	0	13	120,980,70,151,130,236,55,103,189,61,199,118,4436,	0,67011,75140,123111,140325,144020,168427,173293,191514,332013,381970,399620,409877,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr1	231626814	232041272	chr1:231626814-232041272	1	+	231626867	232036831	0	13	120,980,70,151,130,236,55,103,189,61,265,118,4581,	0,67011,75140,123111,140325,144020,168427,173293,191514,332013,381970,399620,409877,
#Partially deleted in new
chr1	231626814	231819244	chr1:231626814-231819244	0	+	231626867	231795258	789624	10	120,980,70,151,130,236,179,55,103,916,	0,67011,75140,123111,140325,144020,147824,168427,173293,191514,
#Partially deleted in new
chr1	231626814	232009255	chr1:231626814-232009255	1	+	231626867	232008891	0	10	120,980,70,151,130,236,55,103,189,471,	0,67011,75140,123111,140325,144020,168427,173293,191514,381970,
#Partially deleted in new
chr1	231626814	231866685	chr1:231626814-231866685	1	+	231626867	231813306	789624	11	120,980,70,151,130,236,55,103,152,189,163,	0,67011,75140,123111,140325,144020,168427,173293,186415,191514,239708,
#Partially deleted in new
chr1	231626814	231819244	chr1:231626814-231819244	1	+	231626867	231818379	0	8	120,980,70,151,130,236,55,916,	0,67011,75140,123111,140325,144020,168427,191514,
#Partially deleted in new
chr1	231626814	231819244	chr1:231626814-231819244	1	+	231626867	231818525	0	9	120,980,70,151,130,236,55,103,916,	0,67011,75140,123111,140325,144020,168427,173293,191514,
#Partially deleted in new
chr1	231626814	231819244	chr1:231626814-231819244	0	+	231626867	231749949	0	6	120,980,151,130,236,916,	0,67011,123111,140325,144020,191514,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	231626814	231855380	chr1:231626814-231855380	0	+	231626867	231749949	0	9	120,980,151,130,236,55,103,189,642,	0,67011,123111,140325,144020,168427,173293,191514,227924,
#Partially deleted in new
chr1	231626814	231819244	chr1:231626814-231819244	0	+	231626867	231749949	0	8	120,980,151,130,236,55,103,916,	0,67011,123111,140325,144020,168427,173293,191514,
#Partially deleted in new
chr1	231626814	231819244	chr1:231626814-231819244	1	+	231626867	231818350	0	5	120,151,130,236,916,	0,123111,140325,144020,191514,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	231626814	232041268	chr1:231626814-232041268	1	+	231626867	232036831	789624	11	120,980,70,151,55,103,189,61,265,120,4575,	0,67011,75140,123111,168427,173293,191514,332013,381970,399620,409879,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	231626814	232041270	chr1:231626814-232041270	1	+	231626867	231770895	789624	12	120,980,70,151,236,55,103,189,61,265,118,4579,	0,67011,75140,123111,144020,168427,173293,191514,332013,381970,399620,409877,
#Partially deleted in new
chr1	231626814	231959503	chr1:231626814-231959503	1	+	231626867	231958873	0	7	120,980,70,151,130,236,676,	0,67011,75140,123111,140325,144020,332013,
#Partially deleted in new
chr1	231626836	232009654	chr1:231626836-232009654	0	+	231626867	231693897	789624	11	98,976,70,151,130,236,55,103,189,61,870,	0,66993,75118,123089,140303,143998,168405,173271,191492,331991,381948,
#Partially deleted in new
chr1	231626867	231749949	chr1:231626867-231749949	1	+	231626867	231749949	0	3	67,980,24,	0,66958,123058,
#Partially deleted in new
chr1	231629389	231702661	chr1:231629389-231702661	0	+	231629389	231629389	8553170	3	184,980,707,	0,64436,72565,
#Deleted in new
chr1	231670634	231670750	chr1:231670634-231670750	3	+	231670634	231670634	8553170	1	116,	0,
#Partially deleted in new
chr1	231684751	231693935	chr1:231684751-231693935	0	+	231684751	231684751	8553170	2	378,110,	0,9074,
#Deleted in new
chr1	231814981	231815186	chr1:231814981-231815186	3	+	231814981	231814981	8553170	1	205,	0,
#Partially deleted in new
chr1	231818904	232009022	chr1:231818904-232009022	0	+	231818904	231818904	8553170	3	246,61,238,	0,139923,189880,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	232174931	232180113	chr1:232174931-232180113	3	-	232174931	232174931	8553170	2	924,1317,	0,3865,
#Deleted in new
chr1	232221937	232222174	chr1:232221937-232222174	7	-	232221937	232221937	16724991	1	237,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	232222865	232223145	chr1:232222865-232223145	3	+	232222865	232222865	8553170	1	280,	0,
#Partially deleted in new
chr1	232397964	232561558	chr1:232397964-232561558	3	-	232399126	232515339	789624	22	1309,82,124,54,132,220,154,225,389,104,101,84,258,275,577,158,104,175,189,134,1752,90,	0,4427,5483,6160,17529,27624,30446,34282,41143,43326,43803,45637,47564,62922,66875,73406,81662,85827,92909,95562,115892,163504,
#Partially deleted in new
chr1	232397967	232515566	chr1:232397967-232515566	1	-	232399126	232515339	789624	21	1306,82,124,54,132,220,154,225,389,104,101,84,258,275,577,158,104,175,189,134,1710,	0,4424,5480,6157,17526,27621,30443,34279,41140,43323,43800,45634,47561,62919,66872,73403,81659,85824,92906,95559,115889,
#Partially deleted in new
chr1	232398709	232462417	chr1:232398709-232462417	1	-	232399126	232462234	789624	14	564,82,124,132,220,154,225,389,104,101,84,258,275,225,	0,3682,4738,16784,26879,29701,33537,40398,42581,43058,44892,46819,62177,63483,
#Partially deleted in new
chr1	232399141	232402766	chr1:232399141-232402766	0	-	232399141	232399141	8553170	2	132,375,	0,3250,
#Partially deleted in new
chr1	232403532	232415870	chr1:232403532-232415870	0	-	232403532	232403532	8553170	2	39,377,	0,11961,
#Partially deleted in new
chr1	232490685	232493660	chr1:232490685-232493660	0	-	232490685	232490685	8553170	2	377,134,	0,2841,
#Deleted in new
chr1	232700203	232700308	chr1:232700203-232700308	3	+	232700203	232700203	8553170	1	105,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	232727253	232742715	chr1:232727253-232742715	3	-	232727253	232727253	789624	4	1436,207,50,349,	0,3321,8447,15113,
#Deleted in new
chr1	232804891	232808407	chr1:232804891-232808407	3	+	232805023	232808167	789624	1	3516,	0,
#Deleted in new
chr1	232917234	232918018	chr1:232917234-232918018	7	+	232917234	232917234	16724991	1	784,	0,
#Partially deleted in new
chr1	232950604	232978482	chr1:232950604-232978482	0	+	232950604	232950604	8553170	4	140,97,210,320,	0,5742,19304,27558,
#Partially deleted in new
chr1	232950613	232978751	chr1:232950613-232978751	0	+	232950613	232950613	8553170	4	131,163,97,589,	0,4943,5733,27549,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	232950623	232983882	chr1:232950623-232983882	3	+	232950710	232978231	0	5	121,163,97,210,5720,	0,4933,5723,19285,27539,
#Partially deleted in new
chr1	232950632	232978722	chr1:232950632-232978722	0	+	232950632	232950632	8553170	3	112,210,560,	0,19276,27530,
#Partially deleted in new
chr1	232950639	232977528	chr1:232950639-232977528	1	+	232950710	232976524	789624	5	105,163,97,210,1187,	0,4917,5707,19269,25702,
#Partially deleted in new
chr1	232950841	232970118	chr1:232950841-232970118	0	+	232950841	232950841	8553170	4	291,163,97,210,	0,4715,5505,19067,
#Partially deleted in new
chr1	232955657	232976459	chr1:232955657-232976459	0	+	232955657	232955657	8553170	4	62,97,210,158,	0,689,14251,20644,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	232961902	232978651	chr1:232961902-232978651	0	+	232961902	232961902	8553170	2	8216,489,	0,16260,
#Partially deleted in new
chr1	232983434	233295713	chr1:232983434-233295713	3	-	232984303	233295478	789624	34	1043,449,188,275,231,145,113,234,254,216,59,130,109,178,142,151,93,97,110,92,111,172,33,154,146,136,94,146,148,1317,37,121,206,388,	0,2657,14816,15670,16870,18102,31230,33486,41711,70833,73797,106626,112320,151578,156279,176848,177836,194367,195631,215504,216719,225083,234464,234596,243791,253410,267304,268919,269206,274593,277850,278610,279523,311891,
#Deleted in new
chr1	232984134	232985884	chr1:232984134-232985884	0	-	232984134	232984134	8553170	2	343,255,	0,1495,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	232984135	233058518	chr1:232984135-233058518	1	-	232985953	233057322	789624	10	2405,188,275,231,145,113,234,254,216,1287,	0,14115,14969,16169,17401,30529,32785,41010,70132,73096,
#Partially deleted in new
chr1	232984135	233200191	chr1:232984135-233200191	0	-	233017098	233200191	789624	20	342,449,188,275,231,145,113,234,216,59,130,109,178,142,151,93,97,110,92,38,	0,1956,14115,14969,16169,17401,30529,32785,70132,73096,105925,111619,150877,155578,176147,177135,193666,194930,214803,216018,
#Deleted in new
chr1	232984136	232985552	chr1:232984136-232985552	0	-	232984136	232984136	8553170	2	341,42,	0,1374,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	232998322	232999627	chr1:232998322-232999627	0	-	232998322	232998322	8553170	2	116,523,	0,782,
#Partially deleted in new
chr1	233017072	233025632	chr1:233017072-233025632	0	-	233017072	233017072	8553170	2	82,487,	0,8073,
#Partially deleted in new
chr1	233025262	233054689	chr1:233025262-233054689	0	-	233025262	233025262	8553170	2	137,422,	0,29005,
#Partially deleted in new
chr1	233065460	233258152	chr1:233065460-233258152	0	-	233218178	233258152	789624	17	201,178,142,151,93,97,110,92,111,172,33,154,136,94,146,148,125,	0,69552,74253,94822,95810,112341,113605,133478,134693,143057,152438,152570,171384,185278,186893,187180,192567,
#Partially deleted in new
chr1	233089850	233135188	chr1:233089850-233135188	0	-	233089850	233089850	8553170	3	340,109,176,	0,5904,45162,
#Partially deleted in new
chr1	233090161	233139836	chr1:233090161-233139836	0	-	233112939	233139836	789624	5	29,109,122,178,123,	0,5593,22683,44851,49552,
#Partially deleted in new
chr1	233095405	233160307	chr1:233095405-233160307	0	-	233095671	233160307	789624	4	458,178,142,25,	0,39607,44308,64877,
#Partially deleted in new
chr1	233095656	233177835	chr1:233095656-233177835	0	-	233139840	233177835	789624	5	207,178,142,93,34,	0,39356,44057,65614,82145,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	233125903	233160425	chr1:233125903-233160425	0	-	233125903	233125903	8553170	4	303,178,142,143,	0,9109,13810,34379,
#Partially deleted in new
chr1	233134783	233218087	chr1:233134783-233218087	1	-	233134973	233218087	789624	11	407,142,151,93,97,110,92,111,172,33,57,	0,4930,25499,26487,43018,44282,64155,65370,73734,83115,83247,
#Partially deleted in new
chr1	233135012	233258152	chr1:233135012-233258152	1	-	233135012	233218087	789624	16	178,142,151,93,97,110,92,111,172,33,154,136,94,146,148,125,	0,4701,25270,26258,42789,44053,63926,65141,73505,82886,83018,101832,115726,117341,117628,123015,
#Partially deleted in new
chr1	233139808	233180996	chr1:233139808-233180996	0	-	233139808	233139808	8553170	6	47,151,93,97,110,249,	0,20474,21462,37993,39257,40939,
#Partially deleted in new
chr1	233139825	233181102	chr1:233139825-233181102	0	-	233139825	233139825	8553170	6	30,151,93,97,110,70,	0,20457,21445,37976,39240,41207,
#Partially deleted in new
chr1	233160246	233179174	chr1:233160246-233179174	0	-	233160246	233160246	8553170	4	187,93,97,109,	0,1024,17555,18819,
#Partially deleted in new
chr1	233198966	233227269	chr1:233198966-233227269	0	-	233198966	233227269	789624	5	64,111,172,154,44,	0,1187,9551,19064,28259,
#Partially deleted in new
chr1	233199019	233218089	chr1:233199019-233218089	0	-	233208565	233218089	789624	5	11,111,93,33,59,	0,1134,9498,18879,19011,
#Partially deleted in new
chr1	233201491	233252687	chr1:233201491-233252687	0	-	233201491	233201491	8553170	8	759,172,33,154,146,136,94,334,	0,7026,16407,16539,25734,35353,49247,50862,
#Partially deleted in new
chr1	233208658	233227347	chr1:233208658-233227347	0	-	233208658	233208658	8553170	3	31,286,122,	0,9240,18567,
#Deleted in new
chr1	233288867	233289447	chr1:233288867-233289447	7	-	233288867	233288867	16724991	1	580,	0,
#Deleted in new
chr1	233295324	233295727	chr1:233295324-233295727	7	-	233295324	233295324	16724991	2	159,165,	0,238,
#Partially deleted in new
chr1	233327767	233374134	chr1:233327767-233374134	1	+	233328028	233372198	0	6	1066,181,149,176,241,2097,	0,18674,26039,27068,34285,44270,
#Partially deleted in new
chr1	233327767	233385148	chr1:233327767-233385148	3	+	233328028	233382711	0	10	1066,181,149,176,241,123,151,98,780,2844,	0,18674,26039,27068,34285,44270,48148,48662,51163,54537,
#Partially deleted in new
chr1	233375782	233385147	chr1:233375782-233385147	1	+	233375902	233382711	0	4	284,98,780,2843,	0,647,3148,6522,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	233448625	233448781	chr1:233448625-233448781	3	-	233448625	233448625	8553170	1	156,	0,
#Partially deleted in new
chr1	233614003	233672512	chr1:233614003-233672512	3	+	233614171	233671530	0	3	523,396,1242,	0,52591,57267,
#Deleted in new
chr1	233624151	233624219	chr1:233624151-233624219	3	+	233624151	233624151	5263520	1	68,	0,
#Partially deleted in new
chr1	233629557	233671699	chr1:233629557-233671699	0	+	233629557	233629557	8553170	3	357,396,429,	0,37037,41713,
#Partially deleted in new
chr1	233629606	233672238	chr1:233629606-233672238	0	+	233629606	233629606	8553170	6	308,296,33,85,396,968,	0,901,1648,1797,36988,41664,
#Partially deleted in new
chr1	233636523	233666990	chr1:233636523-233666990	0	+	233636523	233636523	8553170	3	58,147,396,	0,764,30071,
#Partially deleted in new
chr1	233649940	233671491	chr1:233649940-233671491	0	+	233649940	233671491	789624	3	109,396,221,	0,16654,21330,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	233655694	233666686	chr1:233655694-233666686	0	+	233655694	233655694	8553170	4	107,193,81,92,	0,4779,6161,10900,
#Deleted in new
chr1	233836079	233836432	chr1:233836079-233836432	7	-	233836079	233836079	16724991	1	353,	0,
#Partially deleted in new
chr1	233904932	234324516	chr1:233904932-234324516	3	+	233905077	234323243	789624	8	198,230,325,220,126,193,90,1509,	0,596,326484,404168,411669,413818,415165,418075,
#Partially deleted in new
chr1	234026850	234027227	chr1:234026850-234027227	7	-	234026850	234026850	16724991	1	377,	0,
#Deleted in new
chr1	234212605	234215088	chr1:234212605-234215088	3	-	234212605	234212605	8553170	2	1502,221,	0,2262,
#Partially deleted in new
chr1	234214270	234324511	chr1:234214270-234324511	1	+	234214498	234323243	789624	7	304,325,220,126,193,90,1504,	0,17146,94830,102331,104480,105827,108737,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	234261705	234274465	chr1:234261705-234274465	3	+	234261705	234261705	8553170	2	154,298,	0,12462,
#Partially deleted in new
chr1	234268582	234272500	chr1:234268582-234272500	3	-	234268582	234268582	8553170	2	241,147,	0,3771,
#Partially deleted in new
chr1	234284971	234285541	chr1:234284971-234285541	7	+	234284971	234284971	16724991	1	570,	0,
#Deleted in new
chr1	234306466	234306539	chr1:234306466-234306539	3	+	234306466	234306466	5263520	1	73,	0,
#Deleted in new
chr1	234356703	234357141	chr1:234356703-234357141	7	-	234356703	234356703	16724991	1	438,	0,
#Partially deleted in new
chr1	234357005	234365828	chr1:234357005-234365828	3	+	234357005	234357005	8553170	2	85,325,	0,8498,
#Deleted in new
chr1	234372185	234372811	chr1:234372185-234372811	3	+	234372185	234372185	8553170	1	626,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	234372806	234373593	chr1:234372806-234373593	3	-	234372806	234372806	789624	2	404,171,	0,616,
#Partially deleted in new
chr1	234373455	234384049	chr1:234373455-234384049	1	+	234373466	234383818	789624	3	223,160,327,	0,774,10267,
#Partially deleted in new
chr1	234373467	234384048	chr1:234373467-234384048	3	+	234374245	234383818	789624	3	211,160,326,	0,762,10255,
#Partially deleted in new
chr1	234373682	234384045	chr1:234373682-234384045	1	+	234373718	234383818	789624	3	158,160,323,	0,547,10040,
#Partially deleted in new
chr1	234373700	234384046	chr1:234373700-234384046	1	+	234374245	234383818	789624	2	689,324,	0,10022,
#Partially deleted in new
chr1	234391312	234479103	chr1:234391312-234479103	3	-	234391576	234479103	0	30	433,137,125,192,172,82,197,87,150,111,121,72,191,189,262,215,162,98,173,100,139,90,97,136,98,53,149,70,98,931,	0,1103,2049,2333,7069,9868,14590,19132,26771,29389,34360,36004,36263,37823,38103,38774,42097,45962,55490,57167,59115,66354,67917,68948,72524,74343,76189,79875,81401,86860,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	234391338	234407955	chr1:234391338-234407955	0	-	234391338	234391338	8553170	7	407,137,115,192,96,82,2053,	0,1077,2023,2307,9514,9842,14564,
#Partially deleted in new
chr1	234391377	234406380	chr1:234391377-234406380	0	-	234391377	234391377	8553170	8	368,137,125,192,172,96,82,478,	0,1038,1984,2268,7004,9475,9803,14525,
#Partially deleted in new
chr1	234391409	234401216	chr1:234391409-234401216	0	-	234391409	234391409	8553170	5	336,137,192,172,36,	0,1006,2236,6972,9771,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	234391597	234392724	chr1:234391597-234392724	0	-	234391597	234391597	8553170	2	148,309,	0,818,
#Partially deleted in new
chr1	234398177	234400902	chr1:234398177-234400902	0	-	234398177	234398177	8553170	2	376,50,	0,2675,
#Partially deleted in new
chr1	234398381	234405993	chr1:234398381-234405993	0	-	234398381	234398381	8553170	4	172,82,169,91,	0,2799,6930,7521,
#Partially deleted in new
chr1	234400250	234410531	chr1:234400250-234410531	0	-	234400250	234400250	8553170	5	73,96,82,197,87,	0,602,930,5652,10194,
#Partially deleted in new
chr1	234410403	234420814	chr1:234410403-234420814	0	-	234410403	234410403	8553170	3	128,150,113,	0,7680,10298,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	234527890	234531779	chr1:234527890-234531779	3	-	234527890	234527890	789624	3	2452,156,252,	0,3135,3637,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	234529941	234531765	chr1:234529941-234531765	0	-	234529941	234529941	8553170	3	401,166,238,	0,1074,1586,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	234565297	234570088	chr1:234565297-234570088	3	+	234565297	234565297	8553170	2	125,265,	0,4526,
#Deleted in new
chr1	234604268	234609525	chr1:234604268-234609525	3	-	234607136	234609494	789624	2	3584,1079,	0,4178,
#Deleted in new
chr1	234604268	234609525	chr1:234604268-234609525	1	-	234607136	234609494	789624	2	3584,1031,	0,4226,
#Deleted in new
chr1	234607007	234609483	chr1:234607007-234609483	3	+	234607007	234607007	8553170	2	630,63,	0,2413,
#Deleted in new
chr1	234607230	234608094	chr1:234607230-234608094	0	-	234607230	234607230	8553170	2	622,61,	0,803,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	234629310	234634780	chr1:234629310-234634780	3	+	234629310	234629310	789624	2	437,1833,	0,3637,
#Deleted in new
chr1	234644665	234647571	chr1:234644665-234647571	3	+	234644665	234644665	8553170	2	81,445,	0,2461,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	234646288	234660924	chr1:234646288-234660924	3	+	234646288	234646288	789624	4	217,239,126,791,	0,8937,9819,13845,
#Partially deleted in new
chr1	234656124	234681122	chr1:234656124-234681122	0	+	234656124	234656124	8553170	2	109,312,	0,24686,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	234660270	234667104	chr1:234660270-234667104	3	+	234660270	234660270	8553170	3	98,62,773,	0,4571,6061,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	234669522	234696153	chr1:234669522-234696153	3	-	234669522	234669522	8553170	2	3468,96,	0,26535,
#Partially deleted in new
chr1	234674095	234683176	chr1:234674095-234683176	1	+	234674095	234674095	8553170	3	31,115,485,	0,6715,8596,
#Partially deleted in new
chr1	234709382	234720220	chr1:234709382-234720220	3	+	234709382	234709382	8553170	4	56,412,141,648,	0,3322,9908,10190,
#Partially deleted in new
chr1	234724041	234731643	chr1:234724041-234731643	1	+	234724041	234724041	789624	3	41,456,3296,	0,1181,4306,
#Deleted in new
chr1	234724968	234727108	chr1:234724968-234727108	0	+	234724968	234724968	8553170	2	710,230,	0,1910,
#Partially deleted in new
chr1	234725397	234736720	chr1:234725397-234736720	3	+	234725397	234725397	8553170	2	281,804,	0,10519,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	234757618	234760056	chr1:234757618-234760056	3	-	234757618	234757618	789624	1	2438,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	234757620	234760056	chr1:234757620-234760056	0	-	234757620	234757620	8553170	1	2436,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	234904185	234904488	chr1:234904185-234904488	3	+	234904185	234904185	8553170	1	303,	0,
#Deleted in new
chr1	234957230	234959989	chr1:234957230-234959989	3	+	234957230	234957230	8553170	2	130,293,	0,2466,
#Partially deleted in new
chr1	234957341	234963999	chr1:234957341-234963999	3	-	234957341	234957341	789624	4	180,400,76,233,	0,337,2499,6425,
#Partially deleted in new
chr1	234959660	234963827	chr1:234959660-234963827	0	-	234959660	234959660	8553170	2	256,61,	0,4106,
#Partially deleted in new
chr1	234959662	234963188	chr1:234959662-234963188	1	-	234959662	234959662	8553170	3	254,150,150,	0,1754,3376,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	234959665	234970062	chr1:234959665-234970062	0	-	234959665	234959665	8553170	3	251,103,73,	0,8722,10324,
#Deleted in new
chr1	234961375	234963126	chr1:234961375-234963126	0	-	234961375	234961375	8553170	2	191,168,	0,1583,
#Deleted in new
chr1	234979646	234980804	chr1:234979646-234980804	3	-	234979646	234979646	8553170	2	697,149,	0,1009,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	235065478	235074220	chr1:235065478-235074220	3	-	235065478	235065478	8553170	3	138,3006,118,	0,1826,8624,
#Deleted in new
chr1	235097186	235097412	chr1:235097186-235097412	7	-	235097186	235097186	16724991	1	226,	0,
#Deleted in new
chr1	235104179	235104609	chr1:235104179-235104609	3	-	235104179	235104179	8553170	1	430,	0,
#Partially deleted in new
chr1	235109335	235128936	chr1:235109335-235128936	3	-	235112063	235128715	0	5	2773,143,82,47,342,	0,4432,10482,12990,19259,
#Partially deleted in new
chr1	235112024	235119899	chr1:235112024-235119899	0	-	235112024	235112024	8553170	4	84,143,68,82,	0,1743,7314,7793,
#Partially deleted in new
chr1	235112102	235122459	chr1:235112102-235122459	0	-	235112102	235112102	8553170	4	6,143,82,134,	0,1665,7715,10223,
#Deleted in new
chr1	235127802	235127937	chr1:235127802-235127937	3	-	235127802	235127802	789624	1	135,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	235131182	235161457	chr1:235131182-235161457	3	-	235131712	235161226	789624	11	815,119,40,64,84,44,60,232,137,175,284,	0,4469,4851,6694,6908,17221,21523,23698,29328,29710,29991,
#Partially deleted in new
chr1	235131633	235194077	chr1:235131633-235194077	0	-	235161228	235194077	789624	17	364,119,40,64,84,44,60,232,137,175,284,109,147,216,114,1209,65,	0,4018,4400,6243,6457,16770,21072,23247,28877,29259,29540,36910,40984,43550,46166,49951,62379,
#Partially deleted in new
chr1	235131648	235136114	chr1:235131648-235136114	0	-	235131648	235131648	8553170	3	349,119,81,	0,4003,4385,
#Partially deleted in new
chr1	235131666	235161220	chr1:235131666-235161220	0	-	235131712	235161220	789624	10	331,119,40,64,84,44,232,137,175,47,	0,3985,4367,6210,6424,16737,23214,28844,29226,29507,
#Partially deleted in new
chr1	235135648	235161234	chr1:235135648-235161234	0	-	235155088	235161234	789624	9	122,40,64,84,44,60,232,175,61,	0,385,2228,2442,12755,17057,19232,25244,25525,
#Partially deleted in new
chr1	235152487	235161232	chr1:235152487-235161232	0	-	235152487	235152487	8553170	5	278,232,137,175,59,	0,2393,8023,8405,8686,
#Partially deleted in new
chr1	235154880	235161171	chr1:235154880-235161171	0	-	235154880	235154880	8553170	3	232,137,279,	0,5630,6012,
#Partially deleted in new
chr1	235154929	235161258	chr1:235154929-235161258	0	-	235154929	235161226	789624	5	183,87,137,175,85,	0,1665,5581,5963,6244,
#Partially deleted in new
chr1	235155087	235160962	chr1:235155087-235160962	0	-	235155087	235155087	8553170	2	25,452,	0,5423,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	235160149	235161283	chr1:235160149-235161283	0	-	235160149	235160149	8553170	3	498,175,110,	0,743,1024,
#Partially deleted in new
chr1	235166894	235328219	chr1:235166894-235328219	1	-	235168524	235326919	789624	23	1758,147,216,114,1209,199,85,176,244,98,95,73,155,77,80,139,92,80,91,66,111,55,451,	0,5723,8289,10905,14690,27118,29136,52898,53407,54670,56271,57808,62336,64218,67518,73418,79525,85835,88765,90265,93747,160019,160874,
#Partially deleted in new
chr1	235166894	235327487	chr1:235166894-235327487	3	-	235168524	235326919	789624	24	1758,147,216,114,1209,199,85,258,176,244,98,95,73,155,77,80,139,92,80,91,66,111,55,328,	0,5723,8289,10905,14690,27118,29136,46874,52898,53407,54670,56271,57808,62336,64218,67518,73418,79525,85835,88765,90265,93747,160019,160265,
#Partially deleted in new
chr1	235167883	235328134	chr1:235167883-235328134	1	-	235168524	235326919	789624	24	769,147,216,114,1209,199,85,258,176,244,98,95,73,155,77,80,139,92,80,91,66,111,55,366,	0,4734,7300,9916,13701,26129,28147,45885,51909,52418,53681,55282,56819,61347,63229,66529,72429,78536,84846,87776,89276,92758,159030,159885,
#Partially deleted in new
chr1	235167883	235328134	chr1:235167883-235328134	0	-	235176889	235326919	789624	25	769,147,216,156,114,1209,199,85,258,176,244,98,95,73,155,77,80,139,92,80,91,66,111,55,366,	0,4734,7300,8864,9916,13701,26129,28147,45885,51909,52418,53681,55282,56819,61347,63229,66529,72429,78536,84846,87776,89276,92758,159030,159885,
#Partially deleted in new
chr1	235172646	235175643	chr1:235172646-235175643	0	-	235172646	235172646	8553170	2	118,460,	0,2537,
#Partially deleted in new
chr1	235177615	235328168	chr1:235177615-235328168	0	-	235177615	235177615	8553170	20	298,1209,199,85,176,244,98,95,73,155,77,80,139,92,80,91,66,111,55,400,	0,3969,16397,18415,42177,42686,43949,45550,47087,51615,53497,56797,62697,68804,75114,78044,79544,83026,149298,150153,
#Partially deleted in new
chr1	235177786	235213916	chr1:235177786-235213916	0	-	235177786	235213916	789624	5	127,1209,199,85,40,	0,3798,16226,18244,36090,
#Partially deleted in new
chr1	235177855	235181865	chr1:235177855-235181865	0	-	235177855	235177855	8553170	3	58,114,281,	0,3215,3729,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	235180138	235234492	chr1:235180138-235234492	0	-	235180138	235180138	8553170	12	2655,199,85,258,176,244,98,95,73,155,77,80,	0,13874,15892,33630,39654,40163,41426,43027,44564,49092,50974,54274,
#Deleted in new
chr1	235190033	235190116	chr1:235190033-235190116	3	-	235190033	235190033	5263520	1	83,	0,
#Partially deleted in new
chr1	235219926	235328196	chr1:235219926-235328196	0	-	235219926	235326919	789624	16	42,244,98,95,73,155,77,80,139,92,80,91,66,111,55,261,	0,375,1638,3239,4776,9304,11186,14486,20386,26493,32803,35733,37233,40715,106987,108009,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	235228310	235328217	chr1:235228310-235328217	0	-	235228310	235228310	8553170	11	1075,77,80,139,92,80,91,66,111,55,449,	0,2802,6102,12002,18109,24419,27349,28849,32331,98603,99458,
#Deleted in new
chr1	235295864	235296335	chr1:235295864-235296335	7	+	235295864	235295864	16724991	1	471,	0,
#Deleted in new
chr1	235326790	235327863	chr1:235326790-235327863	0	-	235326790	235326790	8553170	2	178,95,	0,978,
#Partially deleted in new
chr1	235327349	235343093	chr1:235327349-235343093	1	+	235335264	235342772	0	4	149,93,71,1083,	0,7892,14358,14661,
#Partially deleted in new
chr1	235328398	235342596	chr1:235328398-235342596	0	+	235335264	235342596	789624	4	100,93,71,586,	0,6843,13309,13612,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	235328437	235344525	chr1:235328437-235344525	3	+	235335264	235342772	0	4	61,93,71,2515,	0,6804,13270,13573,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	235328569	235344532	chr1:235328569-235344532	1	+	235335264	235342772	0	4	209,93,71,2522,	0,6672,13138,13441,
#Partially deleted in new
chr1	235328569	235435840	chr1:235328569-235435840	0	+	235380049	235414473	789624	8	209,131,186,89,100,100,77,96,	0,51449,85863,90903,98570,102135,105634,107175,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr1	235328569	235448952	chr1:235328569-235448952	0	+	235342031	235367136	789624	22	209,71,336,115,403,131,85,186,89,100,100,226,77,96,65,65,153,154,69,60,92,283,	0,13138,13441,34444,38532,51449,72933,85863,90903,98570,102135,104376,105634,107175,107816,107974,108752,110199,113244,114282,119779,120100,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	235328569	235448951	chr1:235328569-235448951	3	+	235380049	235448762	0	20	209,93,115,403,131,85,186,89,100,100,77,96,65,65,153,154,69,60,92,282,	0,6672,34444,38532,51449,72933,85863,90903,98570,102135,105634,107175,107816,107974,108752,110199,113244,114282,119779,120100,
#Partially deleted in new
chr1	235328569	235448880	chr1:235328569-235448880	1	+	235419440	235448762	789624	15	209,186,145,100,100,77,96,65,65,153,154,69,60,92,211,	0,85863,90847,98570,102135,105634,107175,107816,107974,108752,110199,113244,114282,119779,120100,
#Partially deleted in new
chr1	235328570	235343138	chr1:235328570-235343138	1	+	235342031	235342772	0	3	208,71,1128,	0,13137,13440,
#Partially deleted in new
chr1	235328570	235448924	chr1:235328570-235448924	0	+	235335264	235342883	789624	23	208,93,71,336,48,403,131,85,186,145,100,100,226,77,96,65,65,153,154,69,60,92,255,	0,6671,13137,13440,14265,38531,51448,72932,85862,90846,98569,102134,104375,105633,107174,107815,107973,108751,110198,113243,114281,119778,120099,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr1	235328570	235448934	chr1:235328570-235448934	1	+	235380049	235448762	0	19	208,115,403,131,85,186,89,100,100,77,96,65,65,153,154,69,60,92,265,	0,34443,38531,51448,72932,85862,90902,98569,102134,105633,107174,107815,107973,108751,110198,113243,114281,119778,120099,
#Partially deleted in new
chr1	235328570	235448929	chr1:235328570-235448929	1	+	235380049	235448762	0	19	208,93,403,131,85,186,89,100,100,77,96,65,65,153,154,69,60,92,260,	0,6671,38531,51448,72932,85862,90902,98569,102134,105633,107174,107815,107973,108751,110198,113243,114281,119778,120099,
#Deleted in new
chr1	235328572	235329984	chr1:235328572-235329984	0	+	235328572	235328572	8553170	2	206,264,	0,1148,
#Partially deleted in new
chr1	235328572	235448944	chr1:235328572-235448944	0	+	235380049	235434253	789624	20	206,93,403,131,85,186,89,100,100,226,77,96,65,65,153,154,69,60,92,275,	0,6669,38529,51446,72930,85860,90900,98567,102132,104373,105631,107172,107813,107971,108749,110196,113241,114279,119776,120097,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	235328572	235448944	chr1:235328572-235448944	1	+	235380049	235448762	0	20	206,48,115,403,131,85,186,89,100,100,77,96,65,65,153,154,69,60,92,275,	0,14263,34441,38529,51446,72930,85860,90900,98567,102132,105631,107172,107813,107971,108749,110196,113241,114279,119776,120097,
#Partially deleted in new
chr1	235328572	235448951	chr1:235328572-235448951	1	+	235380049	235448762	0	17	206,131,85,186,89,100,100,77,96,65,65,153,154,69,60,92,282,	0,51446,72930,85860,90900,98567,102132,105631,107172,107813,107971,108749,110196,113241,114279,119776,120097,
#Partially deleted in new
chr1	235328574	235448924	chr1:235328574-235448924	0	+	235380049	235414473	789624	18	204,93,403,131,186,89,100,100,77,96,65,65,153,154,69,60,92,255,	0,6667,38527,51444,85858,90898,98565,102130,105629,107170,107811,107969,108747,110194,113239,114277,119774,120095,
#Deleted in new
chr1	235328589	235329429	chr1:235328589-235329429	0	+	235328589	235328589	8553170	2	189,317,	0,523,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	235328735	235448741	chr1:235328735-235448741	0	+	235380049	235414473	789624	18	43,115,403,131,186,89,100,100,77,96,65,65,153,154,69,60,92,72,	0,34278,38366,51283,85697,90737,98404,101969,105468,107009,107650,107808,108586,110033,113078,114116,119613,119934,
#Partially deleted in new
chr1	235328735	235437468	chr1:235328735-235437468	0	+	235380049	235437468	789624	13	43,403,131,85,186,89,100,100,77,96,65,65,147,	0,38366,51283,72767,85697,90737,98404,101969,105468,107009,107650,107808,108586,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	235328766	235430795	chr1:235328766-235430795	0	+	235380049	235414473	789624	9	12,93,115,403,131,186,89,100,91,	0,6475,34247,38335,51252,85666,90706,98373,101938,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	235328958	235401587	chr1:235328958-235401587	0	+	235380049	235401587	789624	6	1542,93,115,403,131,85,	0,6283,34055,38143,51060,72544,
#Partially deleted in new
chr1	235329028	235342559	chr1:235329028-235342559	0	+	235335264	235342559	789624	4	155,93,71,549,	0,6213,12679,12982,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	235330466	235448940	chr1:235330466-235448940	0	+	235380049	235414473	789624	18	136,93,403,131,186,89,100,100,77,96,65,65,153,154,69,60,92,271,	0,4775,36635,49552,83966,89006,96673,100238,103737,105278,105919,106077,106855,108302,111347,112385,117882,118203,
#Deleted in new
chr1	235336805	235337087	chr1:235336805-235337087	7	+	235336805	235336805	16724991	1	282,	0,
#Partially deleted in new
chr1	235342251	235448929	chr1:235342251-235448929	0	+	235342251	235342883	789624	19	95,48,403,131,85,186,89,100,100,77,96,65,65,153,154,69,60,92,260,	0,584,24850,37767,59251,72181,77221,84888,88453,91952,93493,94134,94292,95070,96517,99562,100600,106097,106418,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	235361152	235362540	chr1:235361152-235362540	7	+	235361152	235361152	16724991	1	1388,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	235362953	235448932	chr1:235362953-235448932	1	+	235380049	235448762	0	18	175,403,131,85,186,89,100,100,77,96,65,65,153,154,69,60,92,263,	0,4148,17065,38549,51479,56519,64186,67751,71250,72791,73432,73590,74368,75815,78860,79898,85395,85716,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr1	235367359	235452443	chr1:235367359-235452443	1	+	235380049	235448762	0	17	145,131,85,186,89,100,100,77,96,65,65,153,154,69,60,92,3774,	0,12659,34143,47073,52113,59780,63345,66844,68385,69026,69184,69962,71409,74454,75492,80989,81310,
#Partially deleted in new
chr1	235367390	235448926	chr1:235367390-235448926	0	+	235380049	235437343	789624	14	114,131,85,186,89,100,100,77,153,154,69,60,92,257,	0,12628,34112,47042,52082,59749,63314,66813,69931,71378,74423,75461,80958,81279,
#Partially deleted in new
chr1	235367412	235449078	chr1:235367412-235449078	1	+	235380049	235448762	0	17	140,131,85,186,89,100,100,77,96,65,65,153,154,69,60,92,409,	0,12606,34090,47020,52060,59727,63292,66791,68332,68973,69131,69909,71356,74401,75439,80936,81257,
#Partially deleted in new
chr1	235367412	235448899	chr1:235367412-235448899	0	+	235380049	235419429	789624	18	92,131,85,186,145,100,100,226,77,96,65,65,153,154,69,60,92,230,	0,12606,34090,47020,52004,59727,63292,65533,66791,68332,68973,69131,69909,71356,74401,75439,80936,81257,
#Partially deleted in new
chr1	235367415	235448617	chr1:235367415-235448617	1	+	235380049	235448512	789624	16	89,131,85,186,89,100,100,77,96,65,65,153,154,69,60,269,	0,12603,34087,47017,52057,59724,63289,66788,68329,68970,69128,69906,71353,74398,75436,80933,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	235367419	235416073	chr1:235367419-235416073	0	+	235367419	235367419	8553170	3	85,131,1641,	0,12599,47013,
#Partially deleted in new
chr1	235367419	235448952	chr1:235367419-235448952	0	+	235367419	235367419	8553170	16	85,131,85,186,89,100,100,226,77,864,153,154,69,60,92,283,	0,12599,34083,47013,52053,59720,63285,65526,66784,68325,69902,71349,74394,75432,80929,81250,
#Partially deleted in new
chr1	235367421	235448962	chr1:235367421-235448962	1	+	235380049	235448762	789624	16	83,131,85,89,100,100,77,96,65,65,153,220,69,60,92,293,	0,12597,34081,52051,59718,63283,66782,68323,68964,69122,69900,71347,74392,75430,80927,81248,
#Partially deleted in new
chr1	235367422	235448951	chr1:235367422-235448951	0	+	235380049	235414473	789624	16	82,131,186,89,100,100,77,96,65,65,153,154,69,60,92,282,	0,12596,47010,52050,59717,63282,66781,68322,68963,69121,69899,71346,74391,75429,80926,81247,
#Partially deleted in new
chr1	235367423	235434233	chr1:235367423-235434233	0	+	235380049	235434233	789624	5	81,131,100,100,30,	0,12595,59716,63281,66780,
#Partially deleted in new
chr1	235367425	235448963	chr1:235367425-235448963	0	+	235380049	235414473	789624	17	79,131,186,89,100,100,226,77,96,65,65,153,154,69,60,92,294,	0,12593,47007,52047,59714,63279,65520,66778,68319,68960,69118,69896,71343,74388,75426,80923,81244,
#Partially deleted in new
chr1	235367425	235448966	chr1:235367425-235448966	0	+	235380049	235414473	789624	16	79,131,186,145,100,100,77,96,65,65,153,154,69,60,92,297,	0,12593,47007,51991,59714,63279,66778,68319,68960,69118,69896,71343,74388,75426,80923,81244,
#Partially deleted in new
chr1	235367425	235430780	chr1:235367425-235430780	0	+	235380049	235430780	789624	6	79,131,37,89,100,76,	0,12593,47007,52047,59714,63279,
#Partially deleted in new
chr1	235367429	235448944	chr1:235367429-235448944	1	+	235380049	235448762	789624	15	75,131,85,186,100,77,96,65,65,153,154,69,60,92,275,	0,12589,34073,47003,63275,66774,68315,68956,69114,69892,71339,74384,75422,80919,81240,
#Partially deleted in new
chr1	235367429	235448899	chr1:235367429-235448899	3	+	235380049	235448762	0	18	75,131,85,186,89,100,100,153,77,96,65,65,153,154,69,60,92,230,	0,12589,34073,47003,52043,59710,63275,65516,66774,68315,68956,69114,69892,71339,74384,75422,80919,81240,
#Partially deleted in new
chr1	235367429	235448940	chr1:235367429-235448940	0	+	235380049	235427188	789624	16	75,131,85,186,100,100,77,96,65,65,153,154,69,60,92,271,	0,12589,34073,47003,59710,63275,66774,68315,68956,69114,69892,71339,74384,75422,80919,81240,
#Partially deleted in new
chr1	235367429	235448944	chr1:235367429-235448944	0	+	235380049	235414473	789624	14	75,131,186,100,77,96,65,65,153,154,69,60,92,275,	0,12589,47003,63275,66774,68315,68956,69114,69892,71339,74384,75422,80919,81240,
#Partially deleted in new
chr1	235367429	235448918	chr1:235367429-235448918	0	+	235380049	235414473	789624	16	75,131,186,89,100,100,226,77,96,65,65,153,69,60,92,249,	0,12589,47003,52043,59710,63275,65516,66774,68315,68956,69114,69892,74384,75422,80919,81240,
#Partially deleted in new
chr1	235367429	235448951	chr1:235367429-235448951	0	+	235380049	235419429	789624	14	75,131,85,186,145,100,77,864,153,154,69,60,92,282,	0,12589,34073,47003,51987,59710,66774,68315,69892,71339,74384,75422,80919,81240,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	235367429	235416142	chr1:235367429-235416142	0	+	235367429	235367429	8553170	4	75,131,85,1710,	0,12589,34073,47003,
#Partially deleted in new
chr1	235367429	235448934	chr1:235367429-235448934	0	+	235380049	235434253	789624	17	75,131,85,186,89,100,100,226,77,96,223,153,154,69,60,92,265,	0,12589,34073,47003,52043,59710,63275,65516,66774,68315,68956,69892,71339,74384,75422,80919,81240,
#Partially deleted in new
chr1	235367429	235448924	chr1:235367429-235448924	0	+	235380049	235419429	789624	17	75,131,85,186,145,100,100,77,96,65,65,153,154,69,60,92,255,	0,12589,34073,47003,51987,59710,63275,66774,68315,68956,69114,69892,71339,74384,75422,80919,81240,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	235367429	235415990	chr1:235367429-235415990	0	+	235367429	235367429	8553170	4	123,131,85,1558,	0,12589,34073,47003,
#Partially deleted in new
chr1	235367429	235448951	chr1:235367429-235448951	0	+	235380049	235419429	789624	16	75,131,85,186,145,100,100,77,96,223,153,154,69,60,92,282,	0,12589,34073,47003,51987,59710,63275,66774,68315,68956,69892,71339,74384,75422,80919,81240,
#Partially deleted in new
chr1	235367429	235448944	chr1:235367429-235448944	0	+	235380049	235434253	789624	18	75,131,85,186,89,100,100,226,77,96,65,65,153,158,69,60,92,275,	0,12589,34073,47003,52043,59710,63275,65516,66774,68315,68956,69114,69892,71339,74384,75422,80919,81240,
#Partially deleted in new
chr1	235367429	235448791	chr1:235367429-235448791	0	+	235380049	235435792	789624	16	75,131,85,186,89,100,100,96,65,65,153,154,69,60,92,122,	0,12589,34073,47003,52043,59710,63275,68315,68956,69114,69892,71339,74384,75422,80919,81240,
#Partially deleted in new
chr1	235367429	235437387	chr1:235367429-235437387	0	+	235380049	235414473	789624	8	75,131,186,77,96,65,65,66,	0,12589,47003,66774,68315,68956,69114,69892,
#Partially deleted in new
chr1	235367429	235427147	chr1:235367429-235427147	0	+	235380049	235414473	789624	5	123,131,186,89,8,	0,12589,47003,52043,59710,
#Partially deleted in new
chr1	235367430	235448782	chr1:235367430-235448782	0	+	235380049	235427188	789624	17	122,131,85,186,100,100,226,77,96,65,65,153,154,69,60,92,113,	0,12588,34072,47002,59709,63274,65515,66773,68314,68955,69113,69891,71338,74383,75421,80918,81239,
#Partially deleted in new
chr1	235367448	235448951	chr1:235367448-235448951	0	+	235380049	235434253	789624	16	56,131,85,186,100,226,77,96,65,65,153,154,69,60,92,282,	0,12570,34054,46984,63256,65497,66755,68296,68937,69095,69873,71320,74365,75403,80900,81221,
#Partially deleted in new
chr1	235367449	235448932	chr1:235367449-235448932	0	+	235367449	235367449	8553170	15	55,131,85,186,89,100,100,77,864,153,154,69,60,92,263,	0,12569,34053,46983,52023,59690,63255,66754,68295,69872,71319,74364,75402,80899,81220,
#Partially deleted in new
chr1	235367454	235442973	chr1:235367454-235442973	0	+	235380049	235437338	789624	11	50,131,85,186,89,100,77,153,154,69,122,	0,12564,34048,46978,52018,59685,66749,69867,71314,74359,75397,
#Partially deleted in new
chr1	235367469	235448929	chr1:235367469-235448929	0	+	235380049	235414473	789624	14	35,131,186,145,100,100,77,864,153,154,69,60,92,260,	0,12549,46963,51947,59670,63235,66734,68275,69852,71299,74344,75382,80879,81200,
#Partially deleted in new
chr1	235367485	235438909	chr1:235367485-235438909	0	+	235380049	235414473	789624	8	19,131,186,100,100,77,153,141,	0,12533,46947,59654,63219,66718,69836,71283,
#Partially deleted in new
chr1	235367492	235448727	chr1:235367492-235448727	0	+	235367492	235367492	8553170	15	12,131,85,186,89,100,100,77,96,223,153,154,69,60,379,	0,12526,34010,46940,51980,59647,63212,66711,68252,68893,69829,71276,74321,75359,80856,
#Partially deleted in new
chr1	235367494	235448919	chr1:235367494-235448919	0	+	235380049	235435779	789624	12	10,131,85,186,77,864,153,154,69,60,92,250,	0,12524,34008,46938,66709,68250,69827,71274,74319,75357,80854,81175,
#Partially deleted in new
chr1	235380018	235448968	chr1:235380018-235448968	0	+	235380049	235414473	789624	14	131,186,89,100,100,96,65,65,153,154,69,60,92,299,	0,34414,39454,47121,50686,55726,56367,56525,57303,58750,61795,62833,68330,68651,
#Partially deleted in new
chr1	235380046	235448881	chr1:235380046-235448881	1	+	235380049	235448762	789624	16	103,85,186,89,100,100,77,96,65,65,153,220,69,60,92,212,	0,21456,34386,39426,47093,50658,54157,55698,56339,56497,57275,58722,61767,62805,68302,68623,
#Partially deleted in new
chr1	235380053	235436559	chr1:235380053-235436559	0	+	235380053	235435779	789624	7	96,85,186,77,96,65,16,	0,21449,34379,54150,55691,56332,56490,
#Partially deleted in new
chr1	235380072	235430804	chr1:235380072-235430804	0	+	235380072	235414473	789624	5	77,186,99,100,100,	0,34360,39344,47067,50632,
#Partially deleted in new
chr1	235401518	235441823	chr1:235401518-235441823	0	+	235401518	235437338	789624	6	69,186,77,153,154,10,	0,12914,32685,35803,37250,40295,
#Partially deleted in new
chr1	235414486	235434280	chr1:235414486-235434280	0	+	235414486	235414486	8553170	4	132,89,100,77,	0,4986,12653,19717,
#Partially deleted in new
chr1	235414560	235448924	chr1:235414560-235448924	0	+	235414560	235419429	789624	13	58,145,100,100,226,77,864,153,154,69,60,92,255,	0,4856,12579,16144,18385,19643,21184,22761,24208,27253,28291,33788,34109,
#Partially deleted in new
chr1	235418467	235433066	chr1:235418467-235433066	0	+	235418467	235418467	8553170	5	101,145,100,100,121,	0,949,8672,12237,14478,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	235419078	235427174	chr1:235419078-235427174	0	+	235419078	235419078	8553170	2	483,35,	0,8061,
#Partially deleted in new
chr1	235419431	235441875	chr1:235419431-235441875	0	+	235419431	235419431	8553170	7	130,100,100,77,153,154,62,	0,7708,11273,14772,17890,19337,22382,
#Partially deleted in new
chr1	235419510	235448918	chr1:235419510-235448918	0	+	235419510	235434253	789624	11	51,100,100,226,77,153,154,69,60,92,249,	0,7629,11194,13435,14693,17811,19258,22303,23341,28838,29159,
#Partially deleted in new
chr1	235423627	235433085	chr1:235423627-235433085	0	+	235423627	235423627	8553170	4	154,100,100,140,	0,3512,7077,9318,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	235429110	235448746	chr1:235429110-235448746	0	+	235429110	235429110	8553170	8	1694,77,864,153,154,69,60,398,	0,5093,6634,8211,9658,12703,13741,19238,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr1	235429457	235448949	chr1:235429457-235448949	0	+	235429457	235429457	8553170	11	1347,77,96,65,65,153,154,69,60,92,280,	0,4746,6287,6928,7086,7864,9311,12356,13394,18891,19212,
#Deleted in new
chr1	235432984	235433231	chr1:235432984-235433231	7	+	235432984	235432984	16724991	1	247,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	235433350	235448924	chr1:235433350-235448924	0	+	235433350	235433350	8553170	8	930,864,153,154,69,60,92,255,	0,2394,3971,5418,8463,9501,14998,15319,
#Partially deleted in new
chr1	235434154	235436579	chr1:235434154-235436579	0	+	235434154	235434154	8553170	4	126,96,65,36,	0,1590,2231,2389,
#Partially deleted in new
chr1	235440821	235448951	chr1:235440821-235448951	0	+	235440821	235440821	8553170	3	1061,60,603,	0,2030,7527,
#Partially deleted in new
chr1	235441763	235448856	chr1:235441763-235448856	0	+	235441763	235441763	8553170	4	119,60,92,187,	0,1088,6585,6906,
#Partially deleted in new
chr1	235441869	235448963	chr1:235441869-235448963	0	+	235441869	235442961	789624	4	13,110,92,294,	0,982,6479,6800,
#Partially deleted in new
chr1	235449922	235504481	chr1:235449922-235504481	3	-	235450205	235504252	789624	12	418,57,160,126,184,79,111,96,194,101,148,341,	0,3167,4233,5636,8680,15713,20927,30131,34399,39245,44758,54218,
#Partially deleted in new
chr1	235454211	235465799	chr1:235454211-235465799	0	-	235454211	235454211	8553170	4	104,126,184,164,	0,1347,4391,11424,
#Partially deleted in new
chr1	235454286	235470930	chr1:235454286-235470930	0	-	235454286	235454286	8553170	4	29,126,79,81,	0,1272,11349,16563,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	235463457	235504254	chr1:235463457-235504254	0	-	235484496	235504252	789624	6	2257,111,96,194,148,114,	0,7392,16596,20864,31223,40683,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	235464895	235504422	chr1:235464895-235504422	1	-	235465618	235504252	789624	8	819,111,96,194,101,148,123,282,	0,5954,15158,19426,24272,29785,31290,39245,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	235478907	235504425	chr1:235478907-235504425	0	-	235478907	235478907	8553170	4	1242,194,148,285,	0,5414,15773,25233,
#Partially deleted in new
chr1	235480103	235484670	chr1:235480103-235484670	0	-	235480103	235480103	8553170	2	46,349,	0,4218,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	235519970	235520685	chr1:235519970-235520685	7	+	235519970	235519970	16724991	1	715,	0,
#Deleted in new
chr1	235537519	235538041	chr1:235537519-235538041	7	+	235537519	235537519	16724991	1	522,	0,
#Deleted in new
chr1	235538051	235539845	chr1:235538051-235539845	7	-	235538051	235538051	16724991	1	1794,	0,
#Deleted in new
chr1	235540052	235541415	chr1:235540052-235541415	7	-	235540052	235540052	16724991	1	1363,	0,
#Deleted in new
chr1	235541411	235541706	chr1:235541411-235541706	7	-	235541411	235541411	16724991	1	295,	0,
#Deleted in new
chr1	235541758	235542097	chr1:235541758-235542097	7	-	235541758	235541758	16724991	1	339,	0,
#Deleted in new
chr1	235542158	235542390	chr1:235542158-235542390	7	-	235542158	235542158	16724991	1	232,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	235547686	235649993	chr1:235547686-235649993	1	-	235552108	235583838	789624	4	4551,109,112,332,	0,36053,47713,101975,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	235547686	235650754	chr1:235547686-235650754	3	-	235552108	235583838	789624	4	4551,109,112,206,	0,36053,47713,102862,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	235550831	235595479	chr1:235550831-235595479	1	-	235552108	235583838	789624	3	1406,109,80,	0,32908,44568,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	235550831	235650754	chr1:235550831-235650754	1	-	235552108	235583838	789624	3	1406,109,206,	0,32908,99717,
#Partially deleted in new
chr1	235551753	235588959	chr1:235551753-235588959	1	-	235552108	235583838	789624	3	484,109,91,	0,31986,37115,
#Partially deleted in new
chr1	235565760	235566937	chr1:235565760-235566937	7	+	235565760	235565760	16724991	2	438,270,	0,907,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	235614673	235616397	chr1:235614673-235616397	7	+	235614673	235614673	16724991	1	1724,	0,
#Partially deleted in new
chr1	235661040	235866920	chr1:235661040-235866920	3	-	235662939	235830417	789624	53	2038,72,157,98,140,99,137,190,231,218,141,157,67,245,153,56,62,97,146,189,77,177,207,179,192,153,167,231,170,178,628,132,199,138,150,174,246,191,161,174,145,427,110,67,227,157,162,1030,2080,91,199,90,78,	0,2943,3424,16050,16439,25908,32309,36042,41706,48050,51016,54160,55671,59620,62987,67035,68555,69806,69991,72462,72789,73442,80381,82938,85295,90169,90964,92003,94437,96240,97931,101679,105038,109119,112801,113872,116022,119824,120886,126159,127660,130658,132462,139279,139830,141867,143463,144702,147414,151930,169185,172537,205802,
#Partially deleted in new
chr1	235661042	235738007	chr1:235661042-235738007	0	-	235661042	235661042	8553170	22	2036,72,157,98,140,99,137,190,231,218,141,157,67,245,153,56,62,97,146,189,77,3525,	0,2941,3422,16048,16437,25906,32307,36040,41704,48048,51014,54158,55669,59618,62985,67033,68553,69804,69989,72460,72787,73440,
#Partially deleted in new
chr1	235661049	235866924	chr1:235661049-235866924	1	-	235788812	235830417	789624	53	805,1161,72,157,98,140,99,137,190,231,218,141,157,67,245,153,56,62,97,146,189,77,177,207,179,192,153,167,231,170,178,628,132,199,138,150,174,246,191,161,174,145,110,67,227,157,162,1030,2080,91,199,90,82,	0,868,2934,3415,16041,16430,25899,32300,36033,41697,48041,51007,54151,55662,59611,62978,67026,68546,69797,69982,72453,72780,73433,80372,82929,85286,90160,90955,91994,94428,96231,97922,101670,105029,109110,112792,113863,116013,119815,120877,126150,127651,132453,139270,139821,141858,143454,144693,147405,151921,169176,172528,205793,
#Partially deleted in new
chr1	235709105	235712400	chr1:235709105-235712400	0	-	235709105	235709105	8553170	2	203,344,	0,2951,
#Partially deleted in new
chr1	235713108	235728103	chr1:235713108-235728103	0	-	235713108	235713108	8553170	6	68,157,67,245,153,28,	0,2092,3603,7552,10919,14967,
#Partially deleted in new
chr1	235737989	235744032	chr1:235737989-235744032	0	-	235737989	235737989	8553170	3	605,207,54,	0,3432,5989,
#Partially deleted in new
chr1	235738004	235738989	chr1:235738004-235738989	7	+	235738004	235738004	16724991	1	985,	0,
#Partially deleted in new
chr1	235746467	235752171	chr1:235746467-235752171	0	-	235746467	235752171	789624	4	60,162,153,167,	0,702,4742,5537,
#Partially deleted in new
chr1	235759174	235883640	chr1:235759174-235883640	0	-	235759174	235759174	8553170	23	425,132,39,138,150,174,246,191,161,174,145,427,110,67,227,157,162,1030,2080,91,199,90,454,	0,3545,7064,10985,14667,15738,17888,21690,22752,28025,29526,32524,34328,41145,41696,43733,45329,46568,49280,53796,71051,74403,124012,
#Partially deleted in new
chr1	235787069	235788848	chr1:235787069-235788848	0	-	235787069	235787069	8553170	2	304,148,	0,1631,
#Partially deleted in new
chr1	235791572	235883640	chr1:235791572-235883640	0	-	235791572	235791572	8553170	12	553,110,67,227,157,162,1030,2080,91,199,90,454,	0,1930,8747,9298,11335,12931,14170,16882,21398,38653,42005,91614,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	235828804	235883616	chr1:235828804-235883616	0	-	235828804	235828804	789624	4	232,199,90,430,	0,1421,4773,54382,
#Partially deleted in new
chr1	235829408	235866876	chr1:235829408-235866876	0	-	235829408	235829408	8553170	3	1016,90,34,	0,4169,37434,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	235839482	235840182	chr1:235839482-235840182	3	+	235839482	235839482	8553170	2	74,447,	0,253,
#Partially deleted in new
chr1	235852999	235853060	chr1:235852999-235853060	3	-	235852999	235852999	5263520	1	61,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	235942552	235943805	chr1:235942552-235943805	3	-	235942552	235942552	8553170	2	501,239,	0,1014,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	235957878	235971825	chr1:235957878-235971825	3	-	235957878	235957878	8553170	2	125,65,	0,13882,
#Partially deleted in new
chr1	235975829	236065162	chr1:235975829-236065162	3	-	235977866	236065079	0	20	2159,113,124,158,172,127,173,228,123,150,126,144,246,201,252,150,383,227,300,308,	0,3165,3992,4666,5781,9549,15056,17815,36091,37581,41318,48240,50066,53720,56571,62274,66080,69627,72860,89025,
#Partially deleted in new
chr1	235975829	236065109	chr1:235975829-236065109	1	-	235977866	236065079	0	17	2159,113,124,158,172,127,173,228,144,246,201,252,150,383,227,300,255,	0,3165,3992,4666,5781,9549,15056,17815,48240,50066,53720,56571,62274,66080,69627,72860,89025,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	236060676	236060772	chr1:236060676-236060772	3	+	236060676	236060676	8553170	1	96,	0,
#Deleted in new
chr1	236110060	236112370	chr1:236110060-236112370	7	+	236110060	236110060	16724991	1	2310,	0,
#Partially deleted in new
chr1	236142504	236205198	chr1:236142504-236205198	0	+	236142622	236178542	789624	5	532,223,150,129,73,	0,35909,37374,41273,62621,
#Partially deleted in new
chr1	236142531	236208909	chr1:236142531-236208909	3	+	236142622	236208158	789624	7	505,50,223,150,129,125,860,	0,26174,35882,37347,41246,62594,65518,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	236142543	236180188	chr1:236142543-236180188	0	+	236142543	236142543	8553170	2	493,310,	0,37335,
#Partially deleted in new
chr1	236168700	236208482	chr1:236168700-236208482	0	+	236168700	236208070	789624	6	55,223,150,129,125,422,	0,9713,11178,15077,36425,39360,
#Partially deleted in new
chr1	236183777	236221865	chr1:236183777-236221865	0	+	236183777	236183777	8553170	3	129,125,75,	0,21348,38013,
#Partially deleted in new
chr1	236215554	236281985	chr1:236215554-236281985	3	-	236218515	236281783	789624	16	3022,134,87,70,247,93,27,12,47,121,74,83,42,84,120,304,	0,5277,6369,9515,10714,11092,14669,17273,20234,20723,27867,34330,36495,37867,54320,66127,
#Partially deleted in new
chr1	236220172	236226495	chr1:236220172-236226495	0	-	236220827	236226495	789624	4	793,87,70,227,	0,1751,4897,6096,
#Partially deleted in new
chr1	236236331	236281601	chr1:236236331-236281601	0	-	236236331	236249958	789624	7	67,74,83,42,84,120,135,	0,7090,13553,15718,17090,33543,45135,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	236267779	236267958	chr1:236267779-236267958	3	+	236267779	236267779	8553170	1	179,	0,
#Partially deleted in new
chr1	236285975	236286960	chr1:236285975-236286960	7	-	236285975	236285975	16724991	2	301,355,	0,630,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	236348256	236484837	chr1:236348256-236484837	1	+	236409220	236482649	789624	6	28,59,40,59,46,2571,	0,60959,66003,79135,119974,134010,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	236348261	236482319	chr1:236348261-236482319	0	+	236409220	236482319	789624	8	23,242,136,59,40,59,46,53,	0,463,2442,60954,65998,79130,119969,134005,
#Partially deleted in new
chr1	236394277	236482692	chr1:236394277-236482692	1	+	236394444	236482649	789624	6	228,59,40,59,46,426,	0,14938,19982,33114,73953,87989,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	236395415	236484914	chr1:236395415-236484914	3	+	236395629	236482649	789624	6	245,59,40,59,46,2648,	0,13800,18844,31976,72815,86851,
#Partially deleted in new
chr1	236395448	236502915	chr1:236395448-236502915	0	+	236395629	236491750	789624	8	212,59,40,59,46,105,73,76,	0,13767,18811,31943,72782,96288,96634,107391,
#Partially deleted in new
chr1	236483164	236484468	chr1:236483164-236484468	7	+	236483164	236483164	16724991	1	1304,	0,
#Partially deleted in new
chr1	236517999	236539063	chr1:236517999-236539063	0	+	236526070	236539063	789624	5	285,92,148,89,185,	0,5970,7968,19497,20879,
#Partially deleted in new
chr1	236518213	236541691	chr1:236518213-236541691	0	+	236526070	236541691	789624	8	71,77,92,148,89,211,120,38,	0,210,5756,7754,19283,20665,22350,23440,
#Partially deleted in new
chr1	236518238	236548281	chr1:236518238-236548281	1	+	236526070	236548161	0	11	46,148,89,211,120,57,27,126,89,166,270,	0,7729,19258,20640,22325,23415,24522,24676,25321,26511,29773,
#Partially deleted in new
chr1	236518259	236541672	chr1:236518259-236541672	0	+	236526070	236541672	789624	6	25,77,148,89,211,19,	0,164,7708,19237,20619,23394,
#Partially deleted in new
chr1	236518264	236548283	chr1:236518264-236548283	1	+	236526070	236548161	0	12	20,77,148,89,211,120,57,27,126,89,166,272,	0,159,7703,19232,20614,22299,23389,24496,24650,25295,26485,29747,
#Partially deleted in new
chr1	236518272	236552981	chr1:236518272-236552981	3	+	236526070	236548161	0	14	12,77,236,92,148,89,211,120,57,27,126,89,166,4970,	0,151,5116,5697,7695,19224,20606,22291,23381,24488,24642,25287,26477,29739,
#Deleted in new
chr1	236523051	236524508	chr1:236523051-236524508	3	-	236523051	236523051	8553170	1	1457,	0,
#Deleted in new
chr1	236523070	236524500	chr1:236523070-236524500	0	-	236523070	236523070	789624	1	1430,	0,
#Partially deleted in new
chr1	236523438	236549263	chr1:236523438-236549263	1	+	236526070	236548161	0	11	186,92,148,89,211,120,57,27,89,166,1252,	0,531,2529,14058,15440,17125,18215,19322,20121,21311,24573,
#Partially deleted in new
chr1	236523438	236552974	chr1:236523438-236552974	1	+	236526070	236548161	789624	10	186,92,148,89,211,27,126,89,166,4963,	0,531,2529,14058,15440,19322,19476,20121,21311,24573,
#Partially deleted in new
chr1	236523438	236552981	chr1:236523438-236552981	1	+	236526070	236548161	0	12	186,92,148,89,211,120,57,27,126,89,166,4970,	0,531,2529,14058,15440,17125,18215,19322,19476,20121,21311,24573,
#Partially deleted in new
chr1	236523598	236551010	chr1:236523598-236551010	1	+	236526070	236548161	0	10	463,148,89,211,120,57,27,89,166,2999,	0,2369,13898,15280,16965,18055,19162,19961,21151,24413,
#Partially deleted in new
chr1	236523872	236544815	chr1:236523872-236544815	0	+	236526070	236544815	789624	7	189,148,89,211,27,89,66,	0,2095,13624,15006,18888,19687,20877,
#Partially deleted in new
chr1	236523968	236526435	chr1:236523968-236526435	0	+	236523968	236523968	8553170	2	93,468,	0,1999,
#Partially deleted in new
chr1	236523984	236542807	chr1:236523984-236542807	0	+	236523984	236523984	8553170	5	77,148,89,211,47,	0,1983,13512,14894,18776,
#Partially deleted in new
chr1	236523984	236539222	chr1:236523984-236539222	0	+	236523984	236523984	8553170	4	77,148,89,344,	0,1983,13512,14894,
#Partially deleted in new
chr1	236523988	236543609	chr1:236523988-236543609	0	+	236523988	236523988	8553170	7	73,148,89,211,120,57,849,	0,1979,13508,14890,16575,17665,18772,
#Partially deleted in new
chr1	236524005	236542827	chr1:236524005-236542827	0	+	236526070	236538913	789624	5	56,148,89,204,67,	0,1962,13491,14880,18755,
#Partially deleted in new
chr1	236524019	236541706	chr1:236524019-236541706	0	+	236526070	236538995	789624	5	42,148,211,120,53,	0,1948,14859,16544,17634,
#Partially deleted in new
chr1	236524023	236549002	chr1:236524023-236549002	1	+	236526070	236548161	789624	10	38,148,89,130,120,57,27,89,166,991,	0,1944,13473,14936,16540,17630,18737,19536,20726,23988,
#Partially deleted in new
chr1	236524580	236548796	chr1:236524580-236548796	1	+	236526070	236548161	0	10	160,148,89,211,120,57,27,89,166,785,	0,1387,12916,14298,15983,17073,18180,18979,20169,23431,
#Partially deleted in new
chr1	236526070	236548161	chr1:236526070-236548161	1	+	236526070	236548161	789624	8	45,89,211,27,126,89,166,150,	0,11426,12808,16690,16844,17489,18679,21941,
#Deleted in new
chr1	236536161	236536704	chr1:236536161-236536704	3	-	236536161	236536161	8553170	1	543,	0,
#Partially deleted in new
chr1	236540093	236550280	chr1:236540093-236550280	3	-	236540093	236540093	8553170	2	353,141,	0,10046,
#Partially deleted in new
chr1	236540246	236548280	chr1:236540246-236548280	0	+	236540246	236540246	8553170	6	437,57,27,89,166,269,	0,1407,2514,3313,4503,7765,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	236541272	236542856	chr1:236541272-236542856	0	+	236541272	236541272	8553170	2	438,96,	0,1488,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	236542330	236543013	chr1:236542330-236543013	0	+	236542330	236542330	8553170	2	457,99,	0,584,
#Partially deleted in new
chr1	236542714	236544848	chr1:236542714-236544848	0	+	236542714	236542714	8553170	3	326,89,99,	0,845,2035,
#Partially deleted in new
chr1	236543026	236548295	chr1:236543026-236548295	0	+	236543026	236543026	8553170	3	622,166,284,	0,1723,4985,
#Partially deleted in new
chr1	236543295	236545201	chr1:236543295-236545201	0	+	236543295	236543295	8553170	3	353,166,40,	0,1454,1866,
#Partially deleted in new
chr1	236549004	236604504	chr1:236549004-236604504	3	-	236550901	236604095	789624	45	1986,109,159,155,169,105,135,159,151,293,141,124,47,164,127,231,129,122,119,144,104,132,243,159,170,193,137,184,192,122,212,89,96,108,118,111,103,134,212,141,102,142,217,174,83,	0,2994,4576,5593,6291,6546,6800,7095,8190,9232,9990,10709,12220,15493,16914,17641,19991,22346,22563,23406,23720,25197,25656,27214,27775,32217,33731,34008,36020,36815,37236,38397,38943,41842,42988,43518,45007,46535,46828,47831,48873,50478,54155,54949,55417,
#Partially deleted in new
chr1	236550670	236604504	chr1:236550670-236604504	1	-	236550901	236604095	789624	44	320,109,159,155,169,105,135,159,151,293,141,124,47,164,127,231,129,122,119,144,104,132,159,170,193,137,184,192,122,212,89,96,108,118,111,103,134,212,141,102,142,217,174,83,	0,1328,2910,3927,4625,4880,5134,5429,6524,7566,8324,9043,10554,13827,15248,15975,18325,20680,20897,21740,22054,23531,25548,26109,30551,32065,32342,34354,35149,35570,36731,37277,40176,41322,41852,43341,44869,45162,46165,47207,48812,52489,53283,53751,
#Deleted in new
chr1	236573995	236574775	chr1:236573995-236574775	0	-	236573995	236573995	8553170	2	338,115,	0,665,
#Partially deleted in new
chr1	236595771	236599620	chr1:236595771-236599620	0	-	236595771	236595771	8553170	4	273,141,102,138,	0,1064,2106,3711,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	236602824	236604488	chr1:236602824-236604488	1	-	236603155	236604095	789624	3	552,174,67,	0,1129,1597,
#Partially deleted in new
chr1	236686453	236764620	chr1:236686453-236764620	1	+	236686673	236762619	0	21	346,115,120,87,88,79,82,86,93,231,148,151,109,141,183,135,180,147,66,159,2160,	0,31404,32440,33651,39479,41224,44779,47979,50668,52848,56442,58172,61213,62670,65016,67493,68565,71032,73270,74561,76007,
#Partially deleted in new
chr1	236686453	236764620	chr1:236686453-236764620	1	+	236735672	236762619	789624	23	346,115,120,87,88,79,82,86,86,111,93,231,148,151,109,141,183,135,180,147,66,159,2160,	0,31404,32440,33651,39479,41224,44779,47979,49181,50104,50668,52848,56442,58172,61213,62670,65016,67493,68565,71032,73270,74561,76007,
#Partially deleted in new
chr1	236686507	236764631	chr1:236686507-236764631	3	+	236686673	236762619	0	21	292,115,120,87,88,79,82,86,93,231,148,151,109,141,183,135,180,147,66,159,2171,	0,31350,32386,33597,39425,41170,44725,49127,50614,52794,56388,58118,61159,62616,64962,67439,68511,70978,73216,74507,75953,
#Partially deleted in new
chr1	236686526	236744769	chr1:236686526-236744769	0	+	236686526	236686526	8553170	13	273,115,120,87,88,79,82,86,86,93,231,148,144,	0,31331,32367,33578,39406,41151,44706,47906,49108,50595,52775,56369,58099,
#Partially deleted in new
chr1	236737018	236742921	chr1:236737018-236742921	0	+	236737018	236737018	8553170	3	196,231,26,	0,2283,5877,
#Deleted in new
chr1	236747699	236748140	chr1:236747699-236748140	0	+	236747699	236747699	8553170	2	76,265,	0,176,
#Partially deleted in new
chr1	236753898	236762566	chr1:236753898-236762566	0	+	236753898	236753898	8553170	6	183,180,147,66,159,106,	0,1120,3587,5825,7116,8562,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr1	236795280	236903981	chr1:236795280-236903981	1	+	236795703	236897644	0	32	457,215,90,70,93,107,60,95,101,62,68,80,113,141,186,180,117,141,90,108,101,68,121,82,99,76,156,197,201,193,113,6424,	0,8147,10863,13423,15222,17457,20323,21168,28838,30057,31548,33908,36685,40266,43133,55063,57240,57667,64552,66955,68173,78492,79445,85474,89840,91011,93900,95852,99076,100077,101725,102277,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr1	236795309	236903981	chr1:236795309-236903981	3	+	236795703	236897644	0	33	428,215,90,70,93,107,60,95,101,62,68,80,113,141,186,180,117,141,90,153,108,101,68,121,82,99,76,156,197,201,193,113,6424,	0,8118,10834,13394,15193,17428,20294,21139,28809,30028,31519,33879,36656,40237,43104,55034,57211,57638,64523,65815,66926,68144,78463,79416,85445,89811,90982,93871,95823,99047,100048,101696,102248,
#Partially deleted in new
chr1	236795614	236853088	chr1:236795614-236853088	0	+	236795614	236795614	8553170	17	123,215,90,93,107,60,95,101,62,68,80,113,141,186,180,117,141,	0,7813,10529,14888,17123,19989,20834,28504,29723,31214,33574,36351,39932,42799,54729,56906,57333,
#Partially deleted in new
chr1	236819633	236820518	chr1:236819633-236820518	7	+	236819633	236819633	16724991	1	885,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr1	236835615	236900418	chr1:236835615-236900418	0	+	236835615	236897644	789624	20	72,105,180,117,141,90,153,108,101,68,121,82,99,76,156,197,201,193,113,2861,	0,2798,14728,16905,17332,24217,25509,26620,27838,38157,39110,45139,49505,50676,53565,55517,58741,59742,61390,61942,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	236894340	236900409	chr1:236894340-236900409	0	+	236894340	236894340	8553170	3	1210,113,2852,	0,2665,3217,
#Deleted in new
chr1	236981338	236981708	chr1:236981338-236981708	7	+	236981338	236981338	16724991	1	370,	0,
#Partially deleted in new
chr1	237004102	237004418	chr1:237004102-237004418	3	-	237004186	237004372	789624	1	316,	0,
#Partially deleted in new
chr1	237042204	237833988	chr1:237042204-237833988	3	+	237042521	237832647	0	105	365,120,105,21,15,75,79,113,100,97,75,157,165,122,184,136,96,119,134,242,193,217,105,104,84,160,148,209,175,209,353,115,161,160,87,227,805,201,106,144,274,115,133,104,136,187,106,121,170,221,91,141,164,79,90,138,78,76,124,116,65,122,50,61,239,82,131,321,241,88,93,171,60,135,36,113,97,104,52,54,100,80,77,74,81,89,129,105,82,1298,68,148,87,219,131,43,134,61,147,135,157,65,101,52,1437,	0,228292,288673,313760,322153,327329,332512,335118,345076,345882,374844,380887,399114,403196,412186,414395,426887,449601,450749,454306,458506,461084,464505,469483,488222,506226,508339,524362,526940,547588,548435,549534,551271,553293,559820,568557,571834,575081,581560,583456,585602,589222,591373,592684,596152,596810,598692,601122,606239,607672,609206,612069,613616,615739,617780,618605,624307,625678,631891,632526,635843,638251,645250,656760,658024,659773,663008,664744,666653,667275,669540,674993,676257,680923,684068,684882,688055,689841,691500,700091,714083,715492,717571,718750,728602,729807,731315,736461,739360,741470,743764,745783,749224,749900,751662,753084,755832,759651,763932,766696,776831,786176,788325,789309,790347,
#Deleted in new
chr1	237120806	237121109	chr1:237120806-237121109	3	+	237120806	237120806	8553170	1	303,	0,
#Partially deleted in new
chr1	237270496	237832644	chr1:237270496-237832644	1	+	237270496	237832644	789624	103	120,105,21,90,79,113,100,97,75,157,165,122,184,136,96,119,134,242,193,217,105,104,84,160,148,209,175,209,353,115,161,160,87,227,805,201,106,144,274,115,133,104,136,187,106,121,170,221,91,141,164,79,90,138,78,76,124,116,65,122,50,61,239,82,131,321,241,88,93,171,60,135,36,113,97,104,52,54,100,80,77,74,81,89,129,105,82,1310,19,182,87,219,131,43,134,61,147,135,157,65,101,52,93,	0,60381,85468,99022,104220,106826,116784,117590,146552,152595,170822,174904,183894,186103,198595,221309,222457,226014,230214,232792,236213,241191,259930,277934,280047,296070,298648,319296,320143,321242,322979,325001,331528,340265,343542,346789,353268,355164,357310,360930,363081,364392,367860,368518,370400,372830,377947,379380,380914,383777,385324,387447,389488,390313,396015,397386,403599,404234,407551,409959,416958,428468,429732,431481,434716,436452,438361,438983,441248,446701,447965,452631,455776,456590,459763,461549,463208,471799,485791,487200,489279,490458,500310,501515,503023,508169,511068,513178,514491,517457,520932,521608,523370,524792,527540,531359,535640,538404,548539,557884,560033,561017,562055,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	237471118	237471191	chr1:237471118-237471191	3	+	237471118	237471118	5263520	1	73,	0,
#Deleted in new
chr1	237555039	237555171	chr1:237555039-237555171	3	-	237555039	237555039	8553170	1	132,	0,
#Partially deleted in new
chr1	237674763	237786036	chr1:237674763-237786036	0	+	237674763	237674763	8553170	31	83,122,61,239,82,131,321,241,88,93,171,60,135,36,113,97,104,52,54,57,100,80,77,74,81,89,129,105,82,1298,68,	0,5692,24201,25465,27214,30449,32185,34094,34716,36981,42434,43698,48364,51509,52323,55496,57282,58941,67532,80297,81524,82933,85012,86191,96043,97248,98756,103902,106801,108911,111205,
#Deleted in new
chr1	237723210	237727142	chr1:237723210-237727142	0	+	237723210	237723210	8553170	2	52,56,	0,3876,
#Partially deleted in new
chr1	237791845	237832758	chr1:237791845-237832758	0	+	237791845	237791845	8553170	12	74,219,131,43,134,61,147,135,157,65,52,207,	0,259,2021,3443,6191,10010,14291,17055,27190,36535,39668,40706,
#Partially deleted in new
chr1	237800028	237802375	chr1:237800028-237802375	0	+	237800028	237800028	8553170	2	47,520,	0,1827,
#Partially deleted in new
chr1	237830031	237832702	chr1:237830031-237832702	0	+	237830031	237830031	8553170	3	599,52,151,	0,1482,2520,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	237862174	237928321	chr1:237862174-237928321	3	+	237862174	237862174	789624	12	31,123,153,103,149,175,174,229,164,181,72,1573,	0,225,4848,20291,41799,43252,43762,44772,54058,58703,59070,64574,
#Partially deleted in new
chr1	237877863	237890922	chr1:237877863-237890922	3	-	237882421	237890635	789624	13	519,173,105,79,151,190,131,98,188,153,103,122,462,	0,4513,4878,6905,7301,7527,7892,8907,9510,10494,12003,12191,12597,
#Partially deleted in new
chr1	237882404	237890794	chr1:237882404-237890794	1	-	237882421	237890635	789624	12	145,105,79,151,190,131,98,188,153,103,122,334,	0,337,2364,2760,2986,3351,4366,4969,5953,7462,7650,8056,
#Deleted in new
chr1	237926830	237927605	chr1:237926830-237927605	7	+	237926830	237926830	16724991	1	775,	0,
#Deleted in new
chr1	237940761	237941061	chr1:237940761-237941061	7	-	237940761	237940761	16724991	1	300,	0,
#Deleted in new
chr1	237941451	237942492	chr1:237941451-237942492	7	-	237941451	237941451	16724991	1	1041,	0,
#Deleted in new
chr1	237942697	237943653	chr1:237942697-237943653	7	-	237942697	237942697	16724991	1	956,	0,
#Deleted in new
chr1	237943723	237945275	chr1:237943723-237945275	3	-	237944251	237944326	789624	1	1552,	0,
#Deleted in new
chr1	237948016	237949143	chr1:237948016-237949143	7	-	237948016	237948016	16724991	1	1127,	0,
#Deleted in new
chr1	237949213	237949734	chr1:237949213-237949734	7	+	237949213	237949213	16724991	1	521,	0,
#Deleted in new
chr1	237949735	237951536	chr1:237949735-237951536	7	-	237949735	237949735	16724991	1	1801,	0,
#Partially deleted in new
chr1	238107735	238108567	chr1:238107735-238108567	7	-	238107735	238107735	16724991	2	157,355,	0,477,
#Partially deleted in new
chr1	238268493	238268595	chr1:238268493-238268595	7	-	238268493	238268493	16724991	1	102,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	238276036	238287016	chr1:238276036-238287016	3	+	238276036	238276036	8553170	2	123,74,	0,10906,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	238325686	238325788	chr1:238325686-238325788	3	-	238325686	238325686	8553170	1	102,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	238476541	238486044	chr1:238476541-238486044	1	-	238476541	238476541	8553170	3	276,525,260,	0,4615,9243,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	238480371	238486053	chr1:238480371-238486053	1	-	238480371	238480371	789624	2	1310,269,	0,5413,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	238480372	238486038	chr1:238480372-238486038	1	-	238480372	238480372	8553170	2	1309,227,	0,5439,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	238480397	238486054	chr1:238480397-238486054	1	-	238480397	238480397	8553170	3	1284,112,54,	0,5387,5603,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	238480403	238486044	chr1:238480403-238486044	3	-	238480403	238480403	8553170	3	1278,112,40,	0,5381,5601,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	238480440	238486023	chr1:238480440-238486023	1	-	238480440	238480440	8553170	1	5583,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	238485444	238538305	chr1:238485444-238538305	3	+	238485444	238485444	8553170	4	129,87,64,2620,	0,3657,48004,50241,
#Deleted in new
chr1	238491357	238492644	chr1:238491357-238492644	7	+	238491357	238491357	16724991	1	1287,	0,
#Partially deleted in new
chr1	238777048	238779200	chr1:238777048-238779200	7	-	238777048	238777048	16724991	2	1672,147,	0,2005,
#Deleted in new
chr1	239052747	239052903	chr1:239052747-239052903	7	-	239052747	239052747	16724991	1	156,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	239247807	239250818	chr1:239247807-239250818	3	-	239247807	239247807	8553170	1	3011,	0,
#Partially deleted in new
chr1	239386564	239886596	chr1:239386564-239886596	0	+	239386564	239386564	8553170	9	663,99,109,63,103,104,229,127,508,	0,106144,159076,245659,291621,332231,440288,440687,499524,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	239386919	239606207	chr1:239386919-239606207	0	+	239386919	239386919	8553170	4	308,99,109,203,	0,105789,158721,219085,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	239629072	239915452	chr1:239629072-239915452	3	+	239907451	239909224	0	5	467,63,103,127,8020,	0,3151,49113,198179,278360,
#Partially deleted in new
chr1	239632205	239909415	chr1:239632205-239909415	1	+	239907451	239909224	0	4	81,103,127,1983,	0,45980,195046,275227,
#Partially deleted in new
chr1	239632250	239703649	chr1:239632250-239703649	0	+	239632250	239632250	8553170	3	26,103,452,	0,45935,70947,
#Deleted in new
chr1	239703380	239704154	chr1:239703380-239704154	0	-	239703380	239703380	8553170	1	774,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	239703891	239719066	chr1:239703891-239719066	1	-	239703891	239703891	8553170	5	1824,175,227,88,117,	0,2430,3642,10285,15058,
#Deleted in new
chr1	239706321	239707522	chr1:239706321-239707522	0	-	239706321	239706321	8553170	2	175,614,	0,587,
#Partially deleted in new
chr1	239706424	239730465	chr1:239706424-239730465	0	-	239706424	239706424	8553170	4	72,227,88,65,	0,1109,7752,23976,
#Partially deleted in new
chr1	239706424	239730455	chr1:239706424-239730455	0	-	239706424	239706424	8553170	5	72,227,88,155,55,	0,1109,7752,21229,23976,
#Partially deleted in new
chr1	239707123	239719119	chr1:239707123-239719119	1	-	239707123	239707123	789624	3	637,88,170,	0,7053,11826,
#Partially deleted in new
chr1	239707342	239730465	chr1:239707342-239730465	3	-	239707342	239707342	8553170	5	418,88,40,155,65,	0,6834,12796,20311,23058,
#Partially deleted in new
chr1	239707350	239730465	chr1:239707350-239730465	0	-	239707350	239707350	8553170	4	410,88,155,65,	0,6826,20303,23050,
#Partially deleted in new
chr1	239707614	239719127	chr1:239707614-239719127	0	-	239707614	239707614	8553170	3	146,88,178,	0,6562,11335,
#Partially deleted in new
chr1	239719542	239907780	chr1:239719542-239907780	0	+	239907451	239907780	789624	3	112,127,348,	0,107709,187890,
#Deleted in new
chr1	239898015	239899872	chr1:239898015-239899872	3	-	239898015	239898015	789624	2	377,109,	0,1748,
#Deleted in new
chr1	239915438	239916955	chr1:239915438-239916955	3	-	239915438	239915438	8553170	2	392,51,	0,1466,
#Deleted in new
chr1	239972786	239974245	chr1:239972786-239974245	7	+	239972786	239972786	16724991	1	1459,	0,
#Deleted in new
chr1	240012645	240013226	chr1:240012645-240013226	7	+	240012645	240012645	16724991	1	581,	0,
#Partially deleted in new
chr1	240014347	240207187	chr1:240014347-240207187	0	+	240123264	240207187	789624	7	88,46,167,148,12,56,389,	0,53680,108831,163573,165821,173859,192451,
#Partially deleted in new
chr1	240091879	240475189	chr1:240091879-240475189	3	+	240092109	240474154	0	18	1845,167,148,56,1934,145,88,62,92,130,147,60,121,93,52,150,82,1062,	0,31299,86041,96327,114919,119211,166065,202942,237196,237459,238723,242007,242229,263936,300631,346181,380492,382248,
#Deleted in new
chr1	240142669	240145389	chr1:240142669-240145389	7	-	240142669	240142669	16724991	1	2720,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	240154650	240154772	chr1:240154650-240154772	3	-	240154650	240154650	8553170	1	122,	0,
#Deleted in new
chr1	240170154	240171291	chr1:240170154-240171291	7	+	240170154	240170154	16724991	1	1137,	0,
#Partially deleted in new
chr1	240177838	240179644	chr1:240177838-240179644	3	-	240177838	240177838	8553170	3	259,159,79,	0,1478,1727,
#Partially deleted in new
chr1	240177838	240179644	chr1:240177838-240179644	0	-	240177838	240177838	8553170	2	259,79,	0,1727,
#Partially deleted in new
chr1	240235770	240330676	chr1:240235770-240330676	0	+	240235770	240235770	8553170	6	125,88,62,92,130,74,	0,22174,59051,93305,93568,94832,
#Partially deleted in new
chr1	240245259	240329392	chr1:240245259-240329392	0	+	240245562	240329392	789624	5	306,88,62,92,54,	0,12685,49562,83816,84079,
#Partially deleted in new
chr1	240329143	240475183	chr1:240329143-240475183	1	+	240330735	240474154	789624	11	24,130,147,60,10,109,93,52,150,82,1056,	0,195,1459,4743,4965,4977,26672,63367,108917,143228,144984,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	240341384	240341477	chr1:240341384-240341477	3	+	240341384	240341384	8553170	1	93,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	240400670	240401123	chr1:240400670-240401123	3	-	240400670	240400670	8553170	2	192,124,	0,329,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	240457481	240474267	chr1:240457481-240474267	1	+	240472351	240474154	789624	3	1962,800,140,	0,14172,16646,
#Partially deleted in new
chr1	240472097	240474709	chr1:240472097-240474709	0	+	240472097	240472097	8553170	3	29,82,582,	0,274,2030,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	240489572	240612149	chr1:240489572-240612149	3	-	240492968	240493475	789624	2	3904,266,	0,122311,
#Deleted in new
chr1	240530451	240530862	chr1:240530451-240530862	3	+	240530451	240530451	8553170	2	164,193,	0,218,
#Partially deleted in new
chr1	240549866	240550378	chr1:240549866-240550378	7	-	240549866	240549866	16724991	2	147,57,	0,455,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	240588521	240590748	chr1:240588521-240590748	3	-	240588521	240588521	8553170	2	654,21,	0,2206,
#Partially deleted in new
chr1	240636598	240637052	chr1:240636598-240637052	7	-	240636598	240636598	16724991	1	454,	0,
#Deleted in new
chr1	240653366	240653477	chr1:240653366-240653477	3	+	240653366	240653366	8553170	1	111,	0,
#Deleted in new
chr1	240654240	240654625	chr1:240654240-240654625	7	+	240654240	240654240	16724991	1	385,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	240698319	240698429	chr1:240698319-240698429	3	+	240698319	240698319	8553170	1	110,	0,
#Deleted in new
chr1	240739418	240739853	chr1:240739418-240739853	3	-	240739418	240739418	8553170	1	435,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	240763381	240776044	chr1:240763381-240776044	3	+	240763381	240763381	8553170	7	481,162,153,137,101,75,240,	0,2056,4770,7384,7701,11144,12423,
#Partially deleted in new
chr1	240765556	240768680	chr1:240765556-240768680	0	+	240765556	240765556	8553170	2	43,529,	0,2595,
#Deleted in new
chr1	240769419	240771534	chr1:240769419-240771534	7	-	240769419	240769419	16724991	1	2115,	0,
#Partially deleted in new
chr1	240775514	241355776	chr1:240775514-241355776	1	-	240800646	241355776	789624	15	699,81,90,187,126,111,62,99,75,82,77,65,51,97,78,	0,25126,27389,30625,36403,38103,39201,40802,51583,93072,93261,94540,207564,323151,580184,
#Partially deleted in new
chr1	240775514	241356915	chr1:240775514-241356915	3	-	240800646	241355776	789624	18	699,81,90,187,126,111,62,99,75,82,77,65,52,107,51,97,128,17,	0,25126,27389,30625,36403,38103,39201,40802,51583,93072,93261,94540,155202,161085,207564,323151,580184,581384,
#Partially deleted in new
chr1	240775514	241357085	chr1:240775514-241357085	1	-	240776162	241355776	789624	17	699,90,187,126,111,62,99,75,82,77,65,52,107,51,97,128,187,	0,27389,30625,36403,38103,39201,40802,51583,93072,93261,94540,155202,161085,207564,323151,580184,581384,
#Partially deleted in new
chr1	240775514	241357230	chr1:240775514-241357230	1	-	240776162	241355776	789624	18	699,54,90,187,126,111,62,99,75,82,77,65,52,107,51,97,128,332,	0,25940,27389,30625,36403,38103,39201,40802,51583,93072,93261,94540,155202,161085,207564,323151,580184,581384,
#Partially deleted in new
chr1	240775514	240868795	chr1:240775514-240868795	0	-	240800646	240868795	789624	12	699,81,54,90,187,126,111,62,99,75,82,20,	0,25126,25940,27389,30625,36403,38103,39201,40802,51583,93072,93261,
#Partially deleted in new
chr1	240823005	240823433	chr1:240823005-240823433	7	-	240823005	240823005	16724991	1	428,	0,
#Partially deleted in new
chr1	240919652	240920609	chr1:240919652-240920609	7	+	240919652	240919652	16724991	1	957,	0,
#Deleted in new
chr1	240998450	240998794	chr1:240998450-240998794	7	-	240998450	240998450	16724991	1	344,	0,
#Deleted in new
chr1	241132271	241132346	chr1:241132271-241132346	3	+	241132271	241132271	5263520	1	75,	0,
#Deleted in new
chr1	241305579	241305882	chr1:241305579-241305882	7	-	241305579	241305579	16724991	1	303,	0,
#Partially deleted in new
chr1	241497602	241519761	chr1:241497602-241519761	3	-	241497827	241519722	0	10	368,154,128,204,166,183,177,111,135,171,	0,2834,4840,6439,8400,11000,14364,16000,19579,21988,
#Deleted in new
chr1	241511866	241513676	chr1:241511866-241513676	0	-	241511866	241511866	8553170	2	277,74,	0,1736,
#Partially deleted in new
chr1	241513679	241519304	chr1:241513679-241519304	0	-	241513679	241513679	8553170	3	34,135,245,	0,3502,5380,
#Partially deleted in new
chr1	241532133	241592288	chr1:241532133-241592288	1	+	241532444	241592153	0	15	365,70,98,90,49,88,166,72,122,148,58,83,63,60,336,	0,16695,17543,18821,23478,28531,30033,32853,34357,36366,54545,56614,57917,58070,59819,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr1	241532133	241595642	chr1:241532133-241595642	3	+	241532444	241592153	0	15	365,70,98,90,49,88,166,72,122,148,58,83,102,60,3690,	0,16695,17543,18821,23478,28531,30033,32853,34357,36366,54545,56614,57878,58070,59819,
#Partially deleted in new
chr1	241532337	241562264	chr1:241532337-241562264	0	+	241532337	241532337	8553170	8	161,102,70,98,90,49,88,98,	0,4125,16491,17339,18617,23274,28327,29829,
#Partially deleted in new
chr1	241532368	241562283	chr1:241532368-241562283	0	+	241532368	241532368	8553170	8	130,93,70,98,90,49,88,117,	0,4103,16460,17308,18586,23243,28296,29798,
#Partially deleted in new
chr1	241532378	241550087	chr1:241532378-241550087	0	+	241532378	241532378	8553170	3	120,70,411,	0,16450,17298,
#Partially deleted in new
chr1	241532400	241566575	chr1:241532400-241566575	0	+	241532400	241532400	8553170	7	98,90,49,88,166,72,85,	0,18554,23211,28264,29766,32586,34090,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	241532404	241595642	chr1:241532404-241595642	1	+	241532444	241592153	0	14	94,70,98,90,49,88,166,72,122,148,58,83,60,3690,	0,16424,17272,18550,23207,28260,29762,32582,34086,36095,54274,56343,57799,59548,
#Partially deleted in new
chr1	241549661	241555801	chr1:241549661-241555801	0	+	241549661	241549661	8553170	3	113,90,190,	0,1293,5950,
#Partially deleted in new
chr1	241562052	241586736	chr1:241562052-241586736	0	+	241562052	241562052	8553170	5	280,72,46,148,58,	0,2934,4514,6447,24626,
#Partially deleted in new
chr1	241568634	241593459	chr1:241568634-241593459	0	+	241568634	241593397	789624	7	13,58,83,102,60,197,96,	0,18044,20113,21377,21569,23318,24729,
#Partially deleted in new
chr1	241590101	241601178	chr1:241590101-241601178	0	-	241590101	241590101	8553170	4	59,111,252,373,	0,1908,7644,10704,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	241593123	241640361	chr1:241593123-241640361	3	-	241594427	241640254	789624	4	1568,252,320,480,	0,4622,11136,46758,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	241593601	241640340	chr1:241593601-241640340	0	-	241597960	241640254	789624	4	1090,252,160,459,	0,4144,10818,46280,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	241593601	241640355	chr1:241593601-241640355	0	-	241597941	241640254	789624	3	1090,252,474,	0,4144,46280,
#Partially deleted in new
chr1	241594211	241677376	chr1:241594211-241677376	0	-	241594211	241594211	8553170	3	480,252,74,	0,3534,83091,
#Partially deleted in new
chr1	241597762	241601178	chr1:241597762-241601178	0	-	241597762	241597762	8553170	3	235,274,47,	0,2617,3369,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	241628852	241640254	chr1:241628852-241640254	3	-	241633795	241635766	789624	2	7221,373,	0,11029,
#Deleted in new
chr1	241635465	241640254	chr1:241635465-241640254	0	-	241635465	241635766	789624	2	332,373,	0,4416,
#Deleted in new
chr1	241635465	241640254	chr1:241635465-241640254	1	-	241635726	241640254	789624	2	332,373,	0,4416,
#Deleted in new
chr1	241635526	241640254	chr1:241635526-241640254	1	-	241636032	241640254	789624	2	547,373,	0,4355,
#Deleted in new
chr1	241635769	241639249	chr1:241635769-241639249	0	-	241635769	241635769	8553170	2	304,67,	0,3413,
#Partially deleted in new
chr1	241652277	241802133	chr1:241652277-241802133	3	+	241652484	241801215	789624	27	352,131,103,104,111,215,135,80,140,127,149,124,176,177,134,102,70,37,140,106,59,110,186,106,81,114,1002,	0,8252,18796,22366,27207,31209,35183,59524,71019,86085,89238,92115,97269,105005,113940,117126,118343,119383,120514,122827,127726,130994,135571,138313,142929,143979,148854,
#Partially deleted in new
chr1	241660527	241683657	chr1:241660527-241683657	0	+	241660527	241660527	8553170	6	133,103,104,34,111,171,	0,10546,14116,17659,18957,22959,
#Partially deleted in new
chr1	241660632	241676408	chr1:241660632-241676408	0	+	241660632	241660632	8553170	4	63,103,104,327,	0,10441,14011,15449,
#Partially deleted in new
chr1	241683579	241801463	chr1:241683579-241801463	0	+	241683579	241801215	789624	17	122,135,80,140,127,149,124,176,177,88,59,110,186,106,81,114,332,	0,3881,28222,39717,54783,57936,60813,65967,73703,82638,96424,99692,104269,107011,111627,112677,117552,
#Partially deleted in new
chr1	241683579	241801467	chr1:241683579-241801467	1	+	241687491	241801215	789624	17	122,135,80,140,127,149,124,176,177,88,59,110,186,106,81,118,332,	0,3881,28222,39717,54783,57936,60813,65967,73703,82638,96424,99692,104269,107011,111627,112677,117556,
#Partially deleted in new
chr1	241741547	241796298	chr1:241741547-241796298	0	+	241741547	241795237	789624	15	117,124,176,177,134,102,70,37,140,106,59,110,186,81,42,	0,2845,7999,15735,24670,27856,29073,30113,31244,33557,38456,41724,46301,53659,54709,
#Partially deleted in new
chr1	241749546	241801655	chr1:241749546-241801655	0	+	241749546	241801215	789624	15	176,177,134,102,70,37,140,106,59,110,186,106,81,114,524,	0,7736,16671,19857,21074,22114,23245,25558,30457,33725,38302,41044,45660,46710,51585,
#Partially deleted in new
chr1	241770454	241787894	chr1:241770454-241787894	0	+	241770454	241770454	8553170	6	236,37,140,106,59,46,	0,1206,2337,4650,9549,17394,
#Deleted in new
chr1	241831934	241832787	chr1:241831934-241832787	7	+	241831934	241831934	16724991	1	853,	0,
#Partially deleted in new
chr1	241847966	241850460	chr1:241847966-241850460	0	+	241850425	241850460	789624	3	234,297,52,	0,764,2442,
#Partially deleted in new
chr1	241848179	241889939	chr1:241848179-241889939	3	+	241850425	241889600	0	16	174,297,105,178,120,124,138,213,188,97,226,247,595,102,194,475,	0,551,932,2229,4112,5178,9165,10326,12337,13226,18650,23852,30569,33736,37134,41285,
#Partially deleted in new
chr1	241848224	241858589	chr1:241848224-241858589	0	+	241850425	241858589	789624	6	129,297,178,124,138,84,	0,506,2184,5133,9120,10281,
#Partially deleted in new
chr1	241848250	241853481	chr1:241848250-241853481	0	+	241850425	241853481	789624	4	22,297,178,124,	0,480,2158,5107,
#Partially deleted in new
chr1	241848730	241889937	chr1:241848730-241889937	1	+	241850425	241889600	0	14	297,178,120,124,138,213,188,97,226,247,595,102,194,473,	0,1678,3561,4627,8614,9775,11786,12675,18099,23301,30018,33185,36583,40734,
#Partially deleted in new
chr1	241848830	241889746	chr1:241848830-241889746	1	+	241850425	241889473	0	14	197,178,120,124,138,213,188,97,226,247,595,102,194,280,	0,1578,3461,4527,8514,9675,11686,12575,17999,23201,29918,33085,36483,40636,
#Partially deleted in new
chr1	241848949	241858589	chr1:241848949-241858589	0	+	241850425	241858589	789624	5	78,178,115,138,84,	0,1459,4408,8395,9556,
#Partially deleted in new
chr1	241848950	241853481	chr1:241848950-241853481	0	+	241850425	241853481	789624	5	77,108,178,120,124,	0,158,1458,3341,4407,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	241848982	241858718	chr1:241848982-241858718	0	+	241848982	241848982	8553170	6	45,178,124,209,138,89,	0,1426,4375,5590,8362,9647,
#Partially deleted in new
chr1	241850491	241860704	chr1:241850491-241860704	0	+	241850491	241850491	8553170	5	95,120,138,213,188,	0,1800,6853,8014,10025,
#Partially deleted in new
chr1	241879039	241889594	chr1:241879039-241889594	0	+	241879039	241889589	789624	3	304,194,130,	0,6274,10425,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	241885356	241895148	chr1:241885356-241895148	0	+	241885356	241885356	8553170	3	151,97,145,	0,7167,9647,
#Deleted in new
chr1	241916122	241916543	chr1:241916122-241916543	7	+	241916122	241916122	16724991	1	421,	0,
#Deleted in new
chr1	241957766	241959062	chr1:241957766-241959062	3	+	241957766	241959062	0	1	1296,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	241993184	241993682	chr1:241993184-241993682	7	+	241993184	241993184	16724991	1	498,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	241995489	241999073	chr1:241995489-241999073	3	-	241996162	241999008	0	4	896,107,56,123,	0,3024,3286,3461,
#Partially deleted in new
chr1	242057084	242060242	chr1:242057084-242060242	7	+	242057084	242057084	16724991	4	57,109,111,1011,	0,331,519,2147,
#Deleted in new
chr1	242060489	242062595	chr1:242060489-242062595	7	-	242060489	242060489	16724991	6	21,118,90,121,260,212,	0,478,963,1373,1583,1894,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	242082985	242524518	chr1:242082985-242524518	3	-	242089853	242524276	789624	10	7125,115,169,137,198,128,112,169,137,431,	0,17682,24685,30904,41482,137002,182351,205376,265120,441102,
#Partially deleted in new
chr1	242088386	242449456	chr1:242088386-242449456	0	-	242348101	242449356	789624	9	1724,115,169,137,198,128,112,144,103,	0,12281,19284,25503,36081,131601,176950,259712,360967,
#Partially deleted in new
chr1	242088386	242449482	chr1:242088386-242449482	1	-	242089853	242449356	789624	10	1724,115,169,137,198,128,112,169,137,129,	0,12281,19284,25503,36081,131601,176950,199975,259719,360967,
#Partially deleted in new
chr1	242088386	242524696	chr1:242088386-242524696	1	-	242089853	242524276	789624	11	1724,115,169,137,198,128,112,169,137,316,100,	0,12281,19284,25503,36081,131601,176950,199975,259719,435701,436210,
#Partially deleted in new
chr1	242088969	242524696	chr1:242088969-242524696	0	-	242348101	242524276	789624	11	1141,115,169,137,198,128,112,169,144,316,100,	0,11698,18701,24920,35498,131018,176367,199392,259129,435118,435627,
#Partially deleted in new
chr1	242124417	242524671	chr1:242124417-242524671	0	-	242220103	242524276	789624	6	248,128,87,169,137,584,	0,95570,140944,163944,223688,399670,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	242188646	242188789	chr1:242188646-242188789	3	-	242188646	242188646	8553170	1	143,	0,
#Partially deleted in new
chr1	242235461	242265433	chr1:242235461-242265433	0	-	242235461	242235461	8553170	2	460,97,	0,29875,
#Partially deleted in new
chr1	242265336	242449425	chr1:242265336-242449425	0	-	242265336	242449356	789624	4	112,169,137,72,	0,23025,82769,184017,
#Deleted in new
chr1	242345557	242345718	chr1:242345557-242345718	7	+	242345557	242345557	16724991	1	161,	0,
#Deleted in new
chr1	242365188	242365822	chr1:242365188-242365822	7	+	242365188	242365188	16724991	1	634,	0,
#Deleted in new
chr1	242376922	242377432	chr1:242376922-242377432	7	-	242376922	242376922	16724991	1	510,	0,
#Deleted in new
chr1	242671139	242671576	chr1:242671139-242671576	7	+	242671139	242671139	16724991	1	437,	0,
#Deleted in new
chr1	242772619	242773103	chr1:242772619-242773103	7	+	242772619	242772619	16724991	1	484,	0,
#Deleted in new
chr1	242882065	242883475	chr1:242882065-242883475	7	-	242882065	242882065	16724991	1	1410,	0,
#Deleted in new
chr1	242890246	242890803	chr1:242890246-242890803	7	+	242890246	242890246	16724991	1	557,	0,
#Deleted in new
chr1	242975004	242975084	chr1:242975004-242975084	7	+	242975004	242975004	16724991	1	80,	0,
#Deleted in new
chr1	243005844	243007468	chr1:243005844-243007468	3	-	243005844	243005844	8553170	3	430,267,95,	0,567,1529,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	243029511	243047825	chr1:243029511-243047825	7	-	243029511	243029511	16724991	3	405,105,114,	0,1760,18200,
#Partially deleted in new
chr1	243031271	243047869	chr1:243031271-243047869	4	-	243031271	243031271	16724991	3	105,212,158,	0,8009,16440,
#Partially deleted in new
chr1	243038913	243047875	chr1:243038913-243047875	4	-	243038913	243038913	16724991	2	579,164,	0,8798,
#Deleted in new
chr1	243047697	243047875	chr1:243047697-243047875	5	-	243047697	243047697	16724991	1	178,	0,
#Partially deleted in new
chr1	243047736	243052252	chr1:243047736-243052252	5	-	243047736	243047736	16724991	2	139,207,	0,4309,
#Deleted in new
chr1	243049781	243051619	chr1:243049781-243051619	7	+	243049781	243049781	16724991	1	1838,	0,
#Deleted in new
chr1	243054860	243056394	chr1:243054860-243056394	7	-	243054860	243054860	16724991	2	965,278,	0,1256,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr1	243056306	243101744	chr1:243056306-243101744	7	-	243056306	243056306	16724991	18	964,58,191,119,169,197,98,124,65,236,523,59,66,154,217,132,110,359,	0,1057,3171,4112,9766,10784,11318,13274,22681,25583,31403,33014,35224,35734,36172,39684,40883,45079,
#Deleted in new
chr1	243081155	243081259	chr1:243081155-243081259	3	-	243081155	243081155	8553170	1	104,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	243087709	243097299	chr1:243087709-243097299	5	-	243087709	243087709	16724991	4	82,97,66,110,	0,426,3821,9480,
#Partially deleted in new
chr1	243124427	243255050	chr1:243124427-243255050	3	-	243126448	243225280	0	20	2311,52,94,89,171,148,235,1833,127,150,294,164,477,135,163,59,79,90,146,11,	0,3821,4932,11715,15509,17888,31793,39856,45200,48269,61351,61831,66590,74632,76090,76349,87458,97296,100748,130612,
#Partially deleted in new
chr1	243124427	243255321	chr1:243124427-243255321	1	-	243126448	243225280	0	19	2311,52,94,89,171,178,127,1833,127,150,164,477,135,163,59,79,90,146,282,	0,3821,4932,11715,15509,17858,31793,39856,45200,48269,61831,66590,74632,76090,76349,87458,97296,100748,130612,
#Partially deleted in new
chr1	243124427	243255321	chr1:243124427-243255321	1	-	243126448	243225280	0	19	2311,52,94,89,171,148,235,1833,127,150,164,477,135,163,59,79,90,146,282,	0,3821,4932,11715,15509,17888,31793,39856,45200,48269,61831,66590,74632,76090,76349,87458,97296,100748,130612,
#Partially deleted in new
chr1	243124428	243140363	chr1:243124428-243140363	0	-	243124428	243124428	8553170	5	2310,52,94,89,427,	0,3820,4931,11714,15508,
#Partially deleted in new
chr1	243124892	243156821	chr1:243124892-243156821	1	-	243126448	243156309	789624	7	1846,52,94,89,171,178,601,	0,3356,4467,11250,15044,17393,31328,
#Partially deleted in new
chr1	243125163	243200814	chr1:243125163-243200814	0	-	243126448	243200814	789624	15	1575,52,94,89,171,178,235,1833,127,150,644,477,135,163,38,	0,3085,4196,10979,14773,17122,31057,39120,44464,47533,60615,65854,73896,75354,75613,
#Deleted in new
chr1	243125917	243126698	chr1:243125917-243126698	0	-	243125917	243125917	8553170	3	217,117,86,	0,460,695,
#Partially deleted in new
chr1	243125921	243129439	chr1:243125921-243129439	0	-	243125921	243125921	8553170	4	213,126,52,80,	0,691,2327,3438,
#Partially deleted in new
chr1	243126344	243163318	chr1:243126344-243163318	1	-	243126448	243156309	789624	8	394,52,94,89,171,97,127,46,	0,1904,3015,9798,13592,16022,29876,36928,
#Partially deleted in new
chr1	243126408	243136304	chr1:243126408-243136304	0	-	243126408	243126408	8553170	4	330,52,94,162,	0,1840,2951,9734,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	243126683	243128855	chr1:243126683-243128855	0	-	243126683	243126683	8553170	2	55,607,	0,1565,
#Partially deleted in new
chr1	243129359	243164494	chr1:243129359-243164494	0	-	243129359	243164494	789624	6	94,89,171,97,127,211,	0,6783,10577,13007,26861,34924,
#Partially deleted in new
chr1	243129372	243163340	chr1:243129372-243163340	0	-	243129372	243156309	789624	6	81,89,171,97,235,68,	0,6770,10564,12994,26848,33900,
#Partially deleted in new
chr1	243135751	243140074	chr1:243135751-243140074	0	-	243135751	243135751	8553170	2	480,138,	0,4185,
#Partially deleted in new
chr1	243135897	243140588	chr1:243135897-243140588	3	+	243135897	243135897	8553170	2	58,636,	0,4055,
#Partially deleted in new
chr1	243139983	243163310	chr1:243139983-243163310	0	-	243139983	243156309	789624	4	124,97,235,153,	0,2383,16237,23174,
#Partially deleted in new
chr1	243164637	243169445	chr1:243164637-243169445	3	+	243164637	243164637	8553170	3	29,124,220,	0,3649,4588,
#Partially deleted in new
chr1	243164671	243169387	chr1:243164671-243169387	0	+	243164671	243164671	8553170	2	115,162,	0,4554,
#Partially deleted in new
chr1	243164918	243166572	chr1:243164918-243166572	0	-	243164918	243164918	8553170	2	1198,46,	0,1608,
#Partially deleted in new
chr1	243165988	243175188	chr1:243165988-243175188	0	-	243165988	243165988	8553170	4	128,127,150,166,	0,3639,6708,9034,
#Partially deleted in new
chr1	243169439	243186409	chr1:243169439-243186409	0	-	243169535	243186409	789624	3	315,150,151,	0,3257,16819,
#Partially deleted in new
chr1	243169693	243186280	chr1:243169693-243186280	0	-	243176774	243186280	789624	5	61,150,115,294,22,	0,3003,7008,16085,16565,
#Partially deleted in new
chr1	243172810	243186499	chr1:243172810-243186499	0	-	243172810	243172810	8553170	3	36,294,241,	0,12968,13448,
#Partially deleted in new
chr1	243200613	243254470	chr1:243200613-243254470	0	-	243200613	243225280	789624	6	67,59,79,90,146,120,	0,163,11272,21110,24562,53737,
#Partially deleted in new
chr1	243200776	243253320	chr1:243200776-243253320	0	-	243200776	243225280	789624	5	59,79,90,146,219,	0,11109,20947,24399,52325,
#Partially deleted in new
chr1	243211212	243255231	chr1:243211212-243255231	0	-	243211212	243211212	8553170	4	752,90,146,192,	0,10511,13963,43827,
#Partially deleted in new
chr1	243211894	243255348	chr1:243211894-243255348	0	-	243211894	243225280	789624	4	70,90,146,302,	0,9829,13281,43152,
#Partially deleted in new
chr1	243221554	243255216	chr1:243221554-243255216	0	-	243221554	243221554	8553170	3	259,146,177,	0,3621,33485,
#Partially deleted in new
chr1	243256033	243286397	chr1:243256033-243286397	0	+	243256033	243256033	8553170	5	207,166,86,114,126,	0,14058,14944,18509,30238,
#Partially deleted in new
chr1	243256055	243500092	chr1:243256055-243500092	3	+	243256173	243499785	789624	18	185,153,86,114,126,129,65,189,139,153,135,117,143,128,109,132,127,337,	0,14049,14922,18487,30216,37035,48657,51933,60699,74484,84983,88159,122665,159646,161912,170371,232958,243700,
#Partially deleted in new
chr1	243267256	243268119	chr1:243267256-243268119	7	-	243267256	243267256	16724991	2	58,500,	0,363,
#Partially deleted in new
chr1	243269135	243271032	chr1:243269135-243271032	0	+	243269135	243269135	8553170	3	65,166,55,	0,956,1842,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	243271024	243305087	chr1:243271024-243305087	0	+	243271024	243271024	8553170	6	39,114,126,129,65,76,	0,3518,15247,22066,33688,33987,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	243286353	243306548	chr1:243286353-243306548	0	+	243286353	243305144	789624	5	44,129,96,65,1537,	0,6737,7045,18359,18658,
#Partially deleted in new
chr1	243286382	243500091	chr1:243286382-243500091	0	+	243286382	243499785	789624	11	15,65,189,139,153,135,117,143,132,127,336,	0,18330,21606,30372,44157,54656,57832,92338,140044,202631,213373,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	243293117	243305557	chr1:243293117-243305557	0	+	243293117	243293117	8553170	2	102,845,	0,11595,
#Partially deleted in new
chr1	243307783	243316895	chr1:243307783-243316895	0	+	243307783	243307783	8553170	3	100,189,141,	0,205,8971,
#Partially deleted in new
chr1	243338752	243415829	chr1:243338752-243415829	0	+	243338752	243338752	8553170	5	188,135,117,143,128,	0,2286,5462,39968,76949,
#Deleted in new
chr1	243346175	243346255	chr1:243346175-243346255	3	+	243346175	243346175	5263520	1	80,	0,
#Partially deleted in new
chr1	243418016	243476364	chr1:243418016-243476364	0	+	243418016	243418016	8553170	3	60,132,434,	0,8410,57914,
#Partially deleted in new
chr1	243487814	243500089	chr1:243487814-243500089	0	+	243487814	243487814	8553170	3	64,127,334,	0,1199,11941,
#Partially deleted in new
chr1	243488232	243843236	chr1:243488232-243843236	1	-	243499742	243843170	0	14	218,50,103,88,215,129,123,69,66,132,145,112,126,112,	0,11504,24091,57277,64496,75487,84693,125438,126863,149378,157660,176539,207358,354892,
#Partially deleted in new
chr1	243499718	243843584	chr1:243499718-243843584	1	-	243499742	243843170	0	14	68,103,88,215,129,123,69,66,132,145,112,126,158,41,	0,12605,45791,53010,64001,73207,113952,115377,137892,146174,165053,195872,343406,343825,
#Partially deleted in new
chr1	243499719	243843282	chr1:243499719-243843282	1	-	243505248	243843170	0	13	5615,103,88,215,129,123,69,66,132,145,112,126,158,	0,12604,45790,53009,64000,73206,113951,115376,137891,146173,165052,195871,343405,
#Partially deleted in new
chr1	243501762	243850128	chr1:243501762-243850128	3	-	243505248	243843170	0	14	3572,103,88,215,129,123,69,66,132,145,112,126,158,89,	0,10561,43747,50966,61957,71163,111908,113333,135848,144130,163009,193828,341362,348277,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	243545531	243548329	chr1:243545531-243548329	3	+	243545531	243545531	8553170	3	90,349,312,	0,1087,2486,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	243612482	243615146	chr1:243612482-243615146	0	-	243612482	243612482	8553170	3	552,69,51,	0,1188,2613,
#Deleted in new
chr1	243624665	243625056	chr1:243624665-243625056	7	-	243624665	243624665	16724991	1	391,	0,
#Partially deleted in new
chr1	243645904	243851079	chr1:243645904-243851079	0	-	243645904	243843170	789624	5	133,112,126,158,31,	0,18867,49686,197220,205144,
#Partially deleted in new
chr1	243664771	243814682	chr1:243664771-243814682	0	-	243664771	243664771	8553170	3	112,126,184,	0,30819,149727,
#Partially deleted in new
chr1	243687436	243695716	chr1:243687436-243695716	0	-	243687436	243687436	8553170	2	436,126,	0,8154,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	243702856	243740821	chr1:243702856-243740821	3	-	243702856	243702856	8553170	3	189,91,109,	0,36666,37856,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	243793204	243794400	chr1:243793204-243794400	3	-	243793204	243793204	8553170	2	376,141,	0,1055,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	243917401	244047317	chr1:243917401-244047317	3	+	243917401	243917401	789624	12	125,110,118,101,72,224,104,199,129,127,64,426,	0,61008,85981,87656,92619,93295,107564,109834,124025,126021,127826,129490,
#Deleted in new
chr1	244048938	244057472	chr1:244048938-244057472	1	+	244053801	244055370	789624	2	55,3685,	0,4849,
#Deleted in new
chr1	244051282	244057476	chr1:244051282-244057476	3	+	244051431	244055370	789624	2	162,3689,	0,2505,
#Deleted in new
chr1	244064329	244067909	chr1:244064329-244067909	3	+	244064329	244064329	8553170	1	3580,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	244068819	244093026	chr1:244068819-244093026	3	-	244068819	244068819	8553170	5	108,200,86,37,37,	0,5011,6460,22769,24170,
#Partially deleted in new
chr1	244107364	244109011	chr1:244107364-244109011	3	+	244107364	244107364	8553170	2	231,336,	0,1311,
#Partially deleted in new
chr1	244352634	244389091	chr1:244352634-244389091	3	+	244364700	244389069	789624	5	100,69,96,173,141,	0,12053,22737,25832,36316,
#Partially deleted in new
chr1	244352634	244389091	chr1:244352634-244389091	1	+	244364700	244389069	789624	5	100,69,96,77,141,	0,12053,22737,25928,36316,
#Partially deleted in new
chr1	244352648	244389091	chr1:244352648-244389091	0	+	244352648	244352648	8553170	4	86,69,96,141,	0,12039,22723,36302,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	244375099	244409592	chr1:244375099-244409592	3	-	244375099	244375099	8553170	4	412,73,49,108,	0,1291,33612,34385,
#Partially deleted in new
chr1	244378511	244389663	chr1:244378511-244389663	0	+	244378511	244378511	8553170	2	128,713,	0,10439,
#Partially deleted in new
chr1	244394975	244395660	chr1:244394975-244395660	7	-	244394975	244394975	16724991	1	685,	0,
#Partially deleted in new
chr1	244408493	244452134	chr1:244408493-244452134	3	-	244409585	244451817	0	13	1145,150,98,125,155,127,82,108,67,51,69,103,500,	0,2793,7487,9134,10266,11676,14341,15459,15827,24051,28331,29172,43141,
#Partially deleted in new
chr1	244411366	244419273	chr1:244411366-244419273	0	-	244411366	244411366	8553170	4	70,98,125,514,	0,4614,6261,7393,
#Partially deleted in new
chr1	244418893	244424914	chr1:244418893-244424914	0	-	244418893	244418893	8553170	5	21,127,82,108,594,	0,1276,3941,5059,5427,
#Partially deleted in new
chr1	244461370	244640356	chr1:244461370-244640356	1	+	244518615	244640081	789624	19	124,74,70,68,107,493,478,443,59,76,53,51,34,80,100,87,158,54,429,	0,16170,16535,18346,57221,90951,99297,110959,120425,122493,127111,130310,132024,132128,144324,148869,156158,174118,178557,
#Partially deleted in new
chr1	244461375	244640504	chr1:244461375-244640504	3	+	244461429	244640081	789624	22	119,49,74,70,68,25,78,107,493,478,443,59,76,53,51,34,80,100,87,158,54,577,	0,2532,16165,16530,18341,29071,37626,57216,90946,99292,110954,120420,122488,127106,130305,132019,132123,144319,148864,156153,174113,178552,
#Partially deleted in new
chr1	244461375	244552666	chr1:244461375-244552666	0	+	244461375	244461375	8553170	6	119,49,74,70,68,345,	0,2532,16165,16530,18341,90946,
#Partially deleted in new
chr1	244461387	244640360	chr1:244461387-244640360	1	+	244461429	244635497	789624	21	107,49,74,70,68,25,78,107,493,478,443,59,76,53,51,34,80,100,87,54,433,	0,2520,16153,16518,18329,29059,37614,57204,90934,99280,110942,120408,122476,127094,130293,132007,132111,144307,148852,174101,178540,
#Partially deleted in new
chr1	244461403	244552475	chr1:244461403-244552475	0	+	244461403	244461403	8553170	7	91,49,74,70,68,78,154,	0,2504,16137,16502,18313,37598,90918,
#Partially deleted in new
chr1	244461410	244640360	chr1:244461410-244640360	0	+	244461410	244640081	789624	18	84,74,70,68,493,478,443,59,76,53,51,34,80,100,87,158,54,433,	0,16130,16495,18306,90911,99257,110919,120385,122453,127071,130270,131984,132088,144284,148829,156118,174078,178517,
#Partially deleted in new
chr1	244461419	244552465	chr1:244461419-244552465	0	+	244461419	244461419	8553170	10	96,49,74,70,68,25,78,51,107,144,	0,2488,16121,16486,18297,29027,37582,53857,57172,90902,
#Partially deleted in new
chr1	244598390	244598687	chr1:244598390-244598687	7	-	244598390	244598390	16724991	1	297,	0,
#Partially deleted in new
chr1	244617589	244636746	chr1:244617589-244636746	0	+	244617589	244617589	8553170	3	97,54,174,	0,17899,18983,
#Partially deleted in new
chr1	244639927	244641177	chr1:244639927-244641177	0	+	244639927	244639927	8553170	2	140,173,	0,1077,
#Partially deleted in new
chr1	244652934	244709033	chr1:244652934-244709033	3	+	244653313	244705789	789624	5	421,73,94,142,3478,	0,33662,36314,38944,52621,
#Partially deleted in new
chr1	244653102	244705951	chr1:244653102-244705951	1	+	244653313	244705789	789624	4	253,73,137,396,	0,33494,38781,52453,
#Deleted in new
chr1	244653125	244656521	chr1:244653125-244656521	0	+	244653125	244653125	8553170	2	900,226,	0,3170,
#Partially deleted in new
chr1	244653750	244691922	chr1:244653750-244691922	0	+	244653932	244691922	789624	4	275,73,94,44,	0,32846,35498,38128,
#Deleted in new
chr1	244694431	244694720	chr1:244694431-244694720	7	-	244694431	244694431	16724991	1	289,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	244729897	244730962	chr1:244729897-244730962	3	-	244730374	244730923	789624	1	1065,	0,
#Deleted in new
chr1	244731023	244731586	chr1:244731023-244731586	3	+	244731023	244731023	8553170	1	563,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	244835321	244845057	chr1:244835321-244845057	3	+	244835714	244843176	789624	4	435,115,64,2017,	0,6622,6873,7719,
#Partially deleted in new
chr1	244835615	244843252	chr1:244835615-244843252	1	+	244835714	244843176	789624	5	141,36,115,64,212,	0,869,6328,6579,7425,
#Partially deleted in new
chr1	244835655	244843880	chr1:244835655-244843880	0	+	244835655	244835655	8553170	3	101,64,840,	0,6539,7385,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	244835658	244845057	chr1:244835658-244845057	0	+	244835658	244835658	8553170	4	98,115,60,2017,	0,6285,6540,7382,
#Deleted in new
chr1	244839746	244843280	chr1:244839746-244843280	0	+	244839746	244839746	8553170	3	2312,64,240,	0,2448,3294,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	244840637	244854748	chr1:244840637-244854748	0	-	244840637	244840637	8553170	2	4707,8145,	0,5966,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	244840637	244856057	chr1:244840637-244856057	0	-	244848808	244856057	789624	6	4707,103,69,72,185,154,	0,5966,8150,14335,14786,15266,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr1	244840686	244864531	chr1:244840686-244864531	0	-	244840686	244840686	8553170	16	2495,98,7900,72,185,255,169,129,120,264,113,100,140,74,112,858,	0,4560,5917,14286,14737,15217,15770,16041,16911,17324,18042,18588,19648,21774,21932,22987,
#Partially deleted in new
chr1	244843123	244860461	chr1:244843123-244860461	0	-	244848808	244860461	789624	15	18,98,103,100,69,72,185,255,169,129,120,264,113,100,127,	0,2123,3480,3878,5664,11849,12300,12780,13333,13604,14474,14887,15605,16151,17211,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	244843767	244848889	chr1:244843767-244848889	0	-	244843767	244843767	8553170	2	1919,2404,	0,2718,
#Partially deleted in new
chr1	244845199	244864488	chr1:244845199-244864488	0	-	244848808	244864307	789624	17	145,103,52,69,72,185,255,169,129,120,264,113,100,140,74,112,815,	0,1404,1802,3588,9773,10224,10704,11257,11528,12398,12811,13529,14075,15135,17261,17419,18474,
#Partially deleted in new
chr1	244845251	244854503	chr1:244845251-244854503	0	-	244854449	244854503	789624	4	93,103,69,186,	0,1352,3536,9066,
#Partially deleted in new
chr1	244846624	244855597	chr1:244846624-244855597	0	-	244846624	244846624	8553170	3	82,72,174,	0,8348,8799,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	244850296	244864560	chr1:244850296-244864560	3	-	244854449	244864307	0	14	4207,72,185,255,169,129,120,264,113,100,140,74,112,887,	0,4676,5127,5607,6160,6431,7301,7714,8432,8978,10038,12164,12322,13377,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr1	244850299	244864537	chr1:244850299-244864537	1	-	244854449	244864307	0	14	4204,72,185,255,169,129,120,264,113,100,140,74,112,921,	0,4673,5124,5604,6157,6428,7298,7711,8429,8975,10035,12161,12319,13317,
#Partially deleted in new
chr1	244853405	244863106	chr1:244853405-244863106	1	-	244854449	244862752	789624	13	1098,72,185,255,169,129,120,264,113,100,140,74,488,	0,1567,2018,2498,3051,3322,4192,4605,5323,5869,6929,9055,9213,
#Partially deleted in new
chr1	244853417	244862387	chr1:244853417-244862387	1	-	244854449	244860523	789624	11	1086,72,185,255,169,129,120,264,113,100,2053,	0,1555,2006,2486,3039,3310,4180,4593,5311,5857,6917,
#Partially deleted in new
chr1	244853466	244860536	chr1:244853466-244860536	1	-	244854449	244860523	789624	11	1037,72,185,255,169,129,120,264,107,100,202,	0,1506,1957,2437,2990,3261,4131,4544,5262,5808,6868,
#Partially deleted in new
chr1	244853466	244864538	chr1:244853466-244864538	0	-	244853466	244853466	8553170	13	1037,72,185,255,169,129,120,264,113,100,2200,112,922,	0,1506,1957,2437,2990,3261,4131,4544,5262,5808,6868,9152,10150,
#Partially deleted in new
chr1	244853689	244862950	chr1:244853689-244862950	0	-	244853689	244853689	8553170	12	814,72,185,255,169,129,120,264,113,100,140,490,	0,1283,1734,2214,2767,3038,3908,4321,5039,5585,6645,8771,
#Partially deleted in new
chr1	244853695	244862381	chr1:244853695-244862381	0	-	244859327	244860523	789624	11	808,72,185,255,169,129,120,264,113,100,2024,	0,1277,1728,2208,2761,3032,3902,4315,5033,5579,6662,
#Partially deleted in new
chr1	244853751	244864494	chr1:244853751-244864494	1	-	244854449	244864307	789624	12	752,72,185,255,169,129,120,264,113,100,140,821,	0,1221,1672,2152,2705,2976,3846,4259,4977,5523,6583,9922,
#Partially deleted in new
chr1	244853938	244864091	chr1:244853938-244864091	0	-	244854449	244864091	789624	14	565,72,185,255,169,129,120,264,113,100,122,74,112,418,	0,1034,1485,1965,2518,2789,3659,4072,4790,5336,6414,8522,8680,9735,
#Partially deleted in new
chr1	244853981	244858080	chr1:244853981-244858080	0	-	244854449	244858080	789624	7	522,185,255,169,129,120,70,	0,1442,1922,2475,2746,3616,4029,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	244854189	244860018	chr1:244854189-244860018	0	-	244854189	244854189	8553170	3	2436,1547,1290,	0,2538,4539,
#Partially deleted in new
chr1	244854197	244864492	chr1:244854197-244864492	0	-	244854197	244854197	8553170	13	306,72,185,255,169,129,120,264,113,100,2200,112,819,	0,775,1226,1706,2259,2530,3400,3813,4531,5077,6137,8421,9476,
#Partially deleted in new
chr1	244854199	244862381	chr1:244854199-244862381	1	-	244854927	244860523	789624	10	845,185,255,169,129,120,264,113,100,2047,	0,1224,1704,2257,2528,3398,3811,4529,5075,6135,
#Deleted in new
chr1	244854205	244857227	chr1:244854205-244857227	0	-	244854205	244854205	8553170	3	1403,722,500,	0,1698,2522,
#Partially deleted in new
chr1	244854205	244863653	chr1:244854205-244863653	0	-	244859327	244863653	789624	14	298,72,185,255,169,129,120,264,113,100,117,74,112,37,	0,767,1218,1698,2251,2522,3392,3805,4523,5069,6152,8255,8413,9411,
#Partially deleted in new
chr1	244855003	244862375	chr1:244855003-244862375	0	-	244856061	244860523	789624	9	41,673,169,129,120,264,113,100,2041,	0,420,1453,1724,2594,3007,3725,4271,5331,
#Deleted in new
chr1	244855525	244856850	chr1:244855525-244856850	0	-	244856134	244856850	789624	3	83,255,123,	0,378,1202,
#Partially deleted in new
chr1	244856282	244859374	chr1:244856282-244859374	0	-	244856442	244859374	789624	6	343,129,120,264,113,100,	0,445,1315,1728,2446,2992,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	244857261	244862381	chr1:244857261-244862381	0	-	244857261	244857261	8553170	4	456,264,113,3107,	0,749,1467,2013,
#Partially deleted in new
chr1	244858018	244861034	chr1:244858018-244861034	0	-	244858018	244858018	8553170	5	256,113,100,140,274,	0,710,1256,2316,2742,
#Partially deleted in new
chr1	244858047	244861665	chr1:244858047-244861665	0	-	244858047	244858047	8553170	3	794,100,1331,	0,1227,2287,
#Partially deleted in new
chr1	244858164	244864007	chr1:244858164-244864007	0	-	244860336	244864007	789624	6	110,113,100,140,74,334,	0,564,1110,2170,4296,5509,
#Deleted in new
chr1	244864737	244865272	chr1:244864737-244865272	3	+	244864737	244864737	8553170	1	535,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	244943909	244944216	chr1:244943909-244944216	3	+	244943909	244943909	8553170	1	307,	0,
#Deleted in new
chr1	244954857	244954963	chr1:244954857-244954963	3	+	244954857	244954857	8553170	1	106,	0,
#Deleted in new
chr1	244969349	244971088	chr1:244969349-244971088	3	-	244969349	244969349	8553170	1	1739,	0,
#Partially deleted in new
chr1	244969704	245091789	chr1:244969704-245091789	0	+	244969704	244969704	8553170	7	94,85,73,80,43,67,296,	0,47537,89681,112378,113737,113917,121789,
#Deleted in new
chr1	244969738	244970496	chr1:244969738-244970496	0	+	244969738	244969738	8553170	2	305,168,	0,590,
#Partially deleted in new
chr1	244969868	245087839	chr1:244969868-245087839	3	+	244970418	245087360	789624	8	175,115,85,73,80,43,67,595,	0,460,47373,89517,112214,113573,113753,117376,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	244969981	245127164	chr1:244969981-245127164	1	+	244970122	245121948	789624	8	462,112,85,73,80,43,67,5245,	0,32139,47260,89404,112101,113460,113640,151938,
#Partially deleted in new
chr1	244970285	245091806	chr1:244970285-245091806	0	+	244970285	244970285	8553170	6	158,73,80,43,67,780,	0,89100,111797,113156,113336,120741,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	244970326	245121981	chr1:244970326-245121981	1	+	244970418	245121948	789624	7	117,85,73,80,43,67,62,	0,46915,89059,111756,113115,113295,151593,
#Partially deleted in new
chr1	244970350	245087794	chr1:244970350-245087794	0	+	244970350	244970350	8553170	6	93,73,80,43,67,550,	0,89035,111732,113091,113271,116894,
#Partially deleted in new
chr1	244970355	245087556	chr1:244970355-245087556	0	+	244970355	245087360	789624	8	88,112,85,73,80,43,67,312,	0,31765,46886,89030,111727,113086,113266,116889,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	244970389	245122991	chr1:244970389-245122991	0	+	244970389	244970389	789624	6	54,73,80,43,67,1072,	0,88996,111693,113052,113232,151530,
#Partially deleted in new
chr1	244970404	245083831	chr1:244970404-245083831	0	+	244970404	244970404	8553170	6	39,112,73,80,43,210,	0,31716,88981,111678,113037,113217,
#Partially deleted in new
chr1	244970422	245087581	chr1:244970422-245087581	0	+	244970422	244970422	8553170	8	21,85,73,38,80,43,67,337,	0,46819,88963,105151,111660,113019,113199,116822,
#Partially deleted in new
chr1	245002152	245030831	chr1:245002152-245030831	0	+	245002152	245002152	8553170	3	80,85,177,	0,15089,28502,
#Partially deleted in new
chr1	245017241	245086961	chr1:245017241-245086961	0	+	245017241	245086794	789624	6	85,73,80,43,67,202,	0,42144,64841,66200,66380,69518,
#Partially deleted in new
chr1	245017241	245083860	chr1:245017241-245083860	0	+	245017241	245083735	789624	5	85,73,80,43,239,	0,42144,64841,66200,66380,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	245023014	245023118	chr1:245023014-245023118	3	+	245023014	245023014	8553170	1	104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	245043927	245044032	chr1:245043927-245044032	3	+	245043927	245043927	8553170	1	105,	0,
#Partially deleted in new
chr1	245083455	245086961	chr1:245083455-245086961	0	+	245083455	245086794	789624	3	29,67,229,	0,166,3277,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	245107178	245122521	chr1:245107178-245122521	0	+	245107178	245107178	8553170	2	119,602,	0,14741,
#Partially deleted in new
chr1	245123470	245124450	chr1:245123470-245124450	7	-	245123470	245123470	16724991	2	417,374,	0,606,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	245133926	245134090	chr1:245133926-245134090	3	-	245133926	245133926	8553170	1	164,	0,
#Partially deleted in new
chr1	245154984	245703126	chr1:245154984-245703126	3	+	245155424	245702606	789624	15	503,402,534,167,184,207,94,263,184,160,163,3403,203,151,669,	0,1297,211849,264594,385782,447592,452666,454281,456808,491136,529248,530420,543121,543902,547473,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	245206443	245234501	chr1:245206443-245234501	3	-	245206443	245206443	789624	5	350,53,166,126,115,	0,7710,9694,19573,27943,
#Deleted in new
chr1	245282830	245283089	chr1:245282830-245283089	7	-	245282830	245282830	16724991	1	259,	0,
#Partially deleted in new
chr1	245353677	245371717	chr1:245353677-245371717	0	+	245353677	245353677	8553170	4	239,534,119,297,	0,13156,16898,17743,
#Partially deleted in new
chr1	245511001	245709431	chr1:245511001-245709431	1	+	245511105	245702606	789624	12	127,184,207,94,263,184,160,163,3403,203,151,6974,	0,29765,91575,96649,98264,100791,135119,173231,174403,187104,187885,191456,
#Deleted in new
chr1	245614772	245615145	chr1:245614772-245615145	3	-	245614772	245614772	8553170	2	111,160,	0,213,
#Partially deleted in new
chr1	245646091	245687314	chr1:245646091-245687314	0	+	245646091	245646091	8553170	3	189,163,1910,	0,38141,39313,
#Partially deleted in new
chr1	245673731	245676478	chr1:245673731-245676478	3	-	245673731	245673731	8553170	2	174,273,	0,2474,
#Partially deleted in new
chr1	245749341	245930823	chr1:245749341-245930823	0	-	245749341	245749341	8553170	7	323,109,175,88,111,103,954,	0,14699,109154,114457,166188,178589,180528,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	245749341	245956102	chr1:245749341-245956102	0	-	245749341	245749341	8553170	9	323,109,175,88,111,103,68,125,270,	0,14699,109154,114457,166188,178589,180528,203889,206491,
#Partially deleted in new
chr1	245749341	245788942	chr1:245749341-245788942	0	-	245749341	245749341	8553170	3	323,109,82,	0,14699,39519,
#Partially deleted in new
chr1	245749341	246507257	chr1:245749341-246507257	3	-	245749562	246507217	0	12	323,109,175,88,111,103,68,137,58,108,64,204,	0,14699,109154,114457,166188,178589,180528,577859,581138,586025,605689,757712,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr1	245749341	246417409	chr1:245749341-246417409	1	-	245749562	246355081	0	12	323,109,175,88,111,103,68,137,58,108,64,114,	0,14699,109154,114457,166188,178589,180528,577859,581138,586025,605689,667954,
#Partially deleted in new
chr1	245749350	245929937	chr1:245749350-245929937	0	-	245749350	245749350	8553170	8	314,109,74,175,88,111,103,68,	0,14690,64991,109145,114448,166179,178580,180519,
#Partially deleted in new
chr1	245749350	245858647	chr1:245749350-245858647	0	-	245749350	245749350	8553170	2	314,152,	0,109145,
#Partially deleted in new
chr1	245749366	245814411	chr1:245749366-245814411	0	-	245749366	245749366	8553170	2	298,70,	0,64975,
#Partially deleted in new
chr1	245764040	245988562	chr1:245764040-245988562	0	-	245764040	245764040	8553170	7	109,175,88,111,103,68,169,	0,94455,99758,151489,163890,165829,224353,
#Partially deleted in new
chr1	245814341	245988538	chr1:245814341-245988538	0	-	245814341	245814341	8553170	6	74,175,88,103,68,145,	0,44154,49457,113589,115528,174052,
#Partially deleted in new
chr1	245858497	246306009	chr1:245858497-246306009	0	-	245858497	245858497	8553170	6	173,88,111,103,68,91,	0,5301,57032,69433,71372,447421,
#Partially deleted in new
chr1	245858561	246193727	chr1:245858561-246193727	0	-	245858561	245929901	789624	7	109,88,111,103,68,200,53,	0,5237,56968,69369,71308,328181,335113,
#Partially deleted in new
chr1	245863808	246096423	chr1:245863808-246096423	0	-	245863808	245863808	8553170	5	78,111,103,68,180,	0,51721,64122,66061,232435,
#Partially deleted in new
chr1	245929897	246355335	chr1:245929897-246355335	0	-	245929897	246355081	789624	6	40,137,58,108,64,155,	0,397303,400582,405469,425133,425283,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	246052556	246507144	chr1:246052556-246507144	0	-	246052556	246052556	8553170	6	513,137,58,108,64,91,	0,274644,277923,282810,302474,454497,
#Partially deleted in new
chr1	246108625	246113866	chr1:246108625-246113866	3	+	246108625	246108625	8553170	4	92,112,199,178,	0,1156,2705,5063,
#Deleted in new
chr1	246178777	246179204	chr1:246178777-246179204	7	+	246178777	246178777	16724991	1	427,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	246189013	246189118	chr1:246189013-246189118	3	-	246189013	246189013	8553170	1	105,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	246321662	246322438	chr1:246321662-246322438	3	-	246321662	246321662	8553170	2	206,155,	0,621,
#Partially deleted in new
chr1	246325812	246507312	chr1:246325812-246507312	1	-	246326377	246507217	789624	6	583,137,58,108,64,259,	0,1388,4667,9554,29218,181241,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	246326763	246507232	chr1:246326763-246507232	0	-	246326763	246326763	8553170	5	574,58,108,64,179,	0,3716,8603,28267,180290,
#Partially deleted in new
chr1	246327332	246483765	chr1:246327332-246483765	0	-	246327332	246355081	789624	5	5,58,108,64,331,	0,3147,8034,27698,156102,
#Partially deleted in new
chr1	246509037	246522592	chr1:246509037-246522592	7	-	246509037	246509037	16724991	14	63,120,179,146,93,69,90,123,48,108,102,78,39,113,	0,1034,1233,2399,2927,3481,3931,4741,5388,7682,8118,8655,9235,13442,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	246516038	246524287	chr1:246516038-246524287	3	-	246516038	246516038	789624	3	792,81,91,	0,1660,8158,
#Deleted in new
chr1	246527029	246528155	chr1:246527029-246528155	7	+	246527029	246527029	16724991	2	172,245,	0,881,
#Deleted in new
chr1	246528561	246528841	chr1:246528561-246528841	7	-	246528561	246528561	16724991	1	280,	0,
#Partially deleted in new
chr1	246540559	246566324	chr1:246540559-246566324	3	-	246541030	246566138	0	8	643,161,63,90,149,154,89,499,	0,3961,7985,10653,16013,16821,23786,25266,
#Partially deleted in new
chr1	246566443	246648235	chr1:246566443-246648235	0	+	246566443	246566443	8553170	8	220,430,206,31,664,22,97,1097,	0,25068,54985,65450,67480,75305,75497,80695,
#Partially deleted in new
chr1	246566445	246668584	chr1:246566445-246668584	3	+	246591562	246665905	789624	11	218,430,206,31,87,115,22,97,899,136,2885,	0,25066,54983,65448,67478,68027,75303,75495,80693,93753,99254,
#Partially deleted in new
chr1	246566460	246648243	chr1:246566460-246648243	1	+	246591562	246648052	789624	9	329,430,206,31,87,115,22,97,1105,	0,25051,54968,65433,67463,68012,75288,75480,80678,
#Partially deleted in new
chr1	246566513	246633957	chr1:246566513-246633957	1	+	246591562	246633927	789624	4	150,430,31,34,	0,24998,65380,67410,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	246605872	246608102	chr1:246605872-246608102	3	+	246605872	246605872	8553170	2	1468,492,	0,1738,
#Deleted in new
chr1	246632250	246632478	chr1:246632250-246632478	7	-	246632250	246632250	16724991	2	133,89,	0,139,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	246682107	246685075	chr1:246682107-246685075	3	+	246682107	246682107	8553170	1	2968,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	246690046	246691821	chr1:246690046-246691821	3	+	246690046	246690046	8553170	2	168,354,	0,1421,
#Partially deleted in new
chr1	246724046	246768137	chr1:246724046-246768137	3	+	246724422	246767300	789624	12	566,113,81,130,50,131,118,120,57,112,82,943,	0,2845,11928,16125,20029,34179,34987,35910,36124,40199,42011,43148,
#Deleted in new
chr1	246755510	246755832	chr1:246755510-246755832	7	-	246755510	246755510	16724991	1	322,	0,
#Partially deleted in new
chr1	246771836	246839611	chr1:246771836-246839611	7	-	246771836	246771836	16724991	23	155,191,145,107,167,135,275,108,118,145,124,55,88,83,93,68,112,155,225,36,203,195,81,	0,4226,4703,5097,5437,6976,8458,14156,15139,17750,18834,20440,22383,23605,25579,27867,30381,35384,37972,43410,48841,58064,67694,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	246772300	246775772	chr1:246772300-246775772	3	+	246772300	246772300	8553170	1	3472,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	246776012	246792385	chr1:246776012-246792385	3	+	246776012	246776012	8553170	6	1090,200,149,82,750,329,	0,4371,5466,13604,14433,16044,
#Partially deleted in new
chr1	246776090	246789600	chr1:246776090-246789600	1	+	246776090	246776090	8553170	4	178,124,200,93,	0,888,4293,13417,
#Partially deleted in new
chr1	246776091	246781554	chr1:246776091-246781554	1	+	246776091	246776091	8553170	4	177,124,126,76,	0,887,4292,5387,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr1	246776228	246789661	chr1:246776228-246789661	4	-	246776228	246776228	16724991	10	25,145,107,167,135,275,109,108,118,75,	0,311,705,1045,2584,4066,4720,9764,10747,13358,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	246780476	246783172	chr1:246780476-246783172	4	-	246780476	246780476	16724991	5	93,109,96,204,52,	0,472,1113,1967,2644,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	246789093	246792385	chr1:246789093-246792385	0	+	246789093	246789093	8553170	2	605,1940,	0,1352,
#Deleted in new
chr1	246790623	246792385	chr1:246790623-246792385	1	+	246790623	246790623	8553170	2	223,329,	0,1433,
#Deleted in new
chr1	246818075	246818180	chr1:246818075-246818180	7	+	246818075	246818075	16724991	1	105,	0,
#Deleted in new
chr1	246833447	246833529	chr1:246833447-246833529	3	-	246833447	246833447	8553170	1	82,	0,
#Partially deleted in new
chr1	246839097	246931424	chr1:246839097-246931424	3	-	246840805	246931327	789624	36	1901,83,134,1828,209,98,124,397,195,193,108,151,151,132,145,188,147,57,124,94,105,141,90,91,129,62,182,133,151,85,117,208,181,254,128,117,	0,3596,4697,10517,13993,16632,18593,21801,22861,24826,28146,28563,36939,37852,38060,46395,48113,49079,49296,50868,51858,52681,55561,56737,59110,60353,60967,61239,63427,64851,66443,68453,74134,77044,79152,92210,
#Partially deleted in new
chr1	246839097	246931363	chr1:246839097-246931363	1	-	246840805	246931226	789624	36	1901,83,134,1828,209,98,124,397,195,193,108,151,151,132,145,188,147,57,124,94,105,141,90,91,129,62,182,133,151,85,117,208,181,254,128,235,	0,3596,4697,10517,13993,16632,18593,21801,22861,24826,28146,28563,36939,37852,38060,46395,48113,49079,49296,50868,51858,52681,55561,56737,59110,60353,60967,61239,63427,64851,66443,68453,74134,77044,79152,92031,
#Partially deleted in new
chr1	246839097	246899480	chr1:246839097-246899480	0	-	246839097	246839097	8553170	26	1901,134,1828,209,98,124,397,195,193,79,108,151,151,132,145,188,147,57,124,94,105,141,90,91,129,30,	0,4697,10517,13993,16632,18593,21801,22861,24826,26157,28146,28563,36939,37852,38060,46395,48113,49079,49296,50868,51858,52681,55561,56737,59110,60353,
#Partially deleted in new
chr1	246839111	246931967	chr1:246839111-246931967	1	-	246840805	246918370	789624	36	1887,83,134,1828,209,98,124,397,195,193,108,151,151,132,145,188,147,57,124,94,105,141,90,91,129,62,182,133,151,85,117,208,181,254,128,390,	0,3582,4683,10503,13979,16618,18579,21787,22847,24812,28132,28549,36925,37838,38046,46381,48099,49065,49282,50854,51844,52667,55547,56723,59096,60339,60953,61225,63413,64837,66429,68439,74120,77030,79138,92466,
#Partially deleted in new
chr1	246840961	246849849	chr1:246840961-246849849	0	-	246842768	246849849	789624	3	37,83,235,	0,1732,8653,
#Partially deleted in new
chr1	246849870	246877068	chr1:246849870-246877068	0	-	246849870	246849870	8553170	12	1572,134,209,98,124,397,195,193,108,151,151,119,	0,2034,3220,5859,7820,11028,12088,14053,17373,17790,26166,27079,
#Partially deleted in new
chr1	246861957	246864298	chr1:246861957-246864298	0	-	246861957	246861957	8553170	2	196,375,	0,1966,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	246945546	247078736	chr1:246945546-247078736	2	-	246979948	247078596	789624	7	281,98,165,135,93,127,143,	0,22148,34293,42574,53801,54401,133047,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	246967661	247078811	chr1:246967661-247078811	1	-	246996047	247078596	789624	6	2017,135,161,93,127,218,	0,20459,28359,31686,32286,110932,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	246985322	247008056	chr1:246985322-247008056	3	-	246986966	247007908	789624	4	2933,93,163,151,	0,14025,14589,22583,
#Partially deleted in new
chr1	247015067	247017291	chr1:247015067-247017291	7	+	247015067	247015067	16724991	2	712,544,	0,1680,
#Partially deleted in new
chr1	247036783	247078755	chr1:247036783-247078755	3	-	247037448	247078596	789624	4	1644,61,127,162,	0,2026,2627,41810,
#Partially deleted in new
chr1	247042790	247044021	chr1:247042790-247044021	7	+	247042790	247042790	16724991	1	1231,	0,
#Partially deleted in new
chr1	247085388	247086067	chr1:247085388-247086067	7	-	247085388	247085388	16724991	2	61,260,	0,419,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	247099961	247104368	chr1:247099961-247104368	1	-	247100373	247104199	789624	4	1358,61,127,172,	0,1769,2025,4235,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	247099990	247104372	chr1:247099990-247104372	3	-	247100373	247104199	789624	4	1329,61,127,434,	0,1740,1996,3948,
#Partially deleted in new
chr1	247100855	247104278	chr1:247100855-247104278	1	-	247101731	247104199	789624	4	464,61,123,82,	0,875,1135,3341,
#Partially deleted in new
chr1	247101050	247104289	chr1:247101050-247104289	1	-	247101233	247104199	789624	3	269,127,93,	0,936,3146,
#Partially deleted in new
chr1	247101289	247104365	chr1:247101289-247104365	0	-	247101289	247104199	789624	3	30,127,427,	0,697,2649,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	247110159	247112417	chr1:247110159-247112417	3	-	247110159	247110159	8553170	1	2258,	0,
#Partially deleted in new
chr1	247119668	247120278	chr1:247119668-247120278	7	+	247119668	247119668	16724991	1	610,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	247121974	247172005	chr1:247121974-247172005	1	-	247123867	247171877	789624	4	1897,61,127,158,	0,37031,37712,49873,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	247123502	247149950	chr1:247123502-247149950	0	-	247123502	247123502	8553170	3	369,42,93,	0,15213,26355,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	247138144	247172002	chr1:247138144-247172002	1	-	247138741	247171877	789624	4	613,61,127,155,	0,20861,21542,33703,
#Partially deleted in new
chr1	247155900	247172016	chr1:247155900-247172016	1	-	247156565	247171877	789624	4	1317,61,127,169,	0,3105,3786,15947,
#Partially deleted in new
chr1	247156419	247171967	chr1:247156419-247171967	3	-	247156565	247171877	789624	4	984,61,127,120,	0,2586,3267,15428,
#Partially deleted in new
chr1	247156916	247172005	chr1:247156916-247172005	0	-	247156916	247156916	8553170	4	301,61,181,158,	0,2089,2770,14931,
#Deleted in new
chr1	247175255	247175525	chr1:247175255-247175525	7	+	247175255	247175255	16724991	1	270,	0,
#Deleted in new
chr1	247183812	247185482	chr1:247183812-247185482	7	-	247183812	247183812	16724991	1	1670,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	247187280	247188526	chr1:247187280-247188526	3	-	247187280	247187280	8553170	1	1246,	0,
#Partially deleted in new
chr1	247189850	247209493	chr1:247189850-247209493	7	-	247189850	247189850	16724991	4	1162,99,126,78,	0,9510,10217,19565,
#Partially deleted in new
chr1	247199398	247210856	chr1:247199398-247210856	5	-	247199398	247199398	16724991	4	57,127,80,166,	0,668,2617,11292,
#Partially deleted in new
chr1	247201567	247210814	chr1:247201567-247210814	4	-	247201567	247201567	16724991	2	513,124,	0,9123,
#Partially deleted in new
chr1	247201567	247210822	chr1:247201567-247210822	4	-	247201567	247201567	16724991	2	528,132,	0,9123,
#Deleted in new
chr1	247201966	247202060	chr1:247201966-247202060	3	-	247201966	247201966	5263520	1	94,	0,
#Partially deleted in new
chr1	247210690	247241823	chr1:247210690-247241823	3	-	247210690	247210690	8553170	4	303,138,218,47,	0,836,1484,31086,
#Deleted in new
chr1	247229939	247231880	chr1:247229939-247231880	7	+	247229939	247229939	16724991	1	1941,	0,
#Deleted in new
chr1	247236867	247237957	chr1:247236867-247237957	7	-	247236867	247236867	16724991	1	1090,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	247255971	247257210	chr1:247255971-247257210	3	+	247256071	247257145	789624	1	1239,	0,
#Partially deleted in new
chr1	247294834	247294941	chr1:247294834-247294941	3	+	247294834	247294834	8553170	1	107,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	247297411	247331743	chr1:247297411-247331743	3	-	247300518	247329578	789624	9	3865,114,108,133,77,184,427,116,312,	0,11063,12287,12912,25742,31271,31777,32554,34020,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	247297411	247313852	chr1:247297411-247313852	0	-	247297411	247297411	8553170	2	3865,5378,	0,11063,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	247298200	247329245	chr1:247298200-247329245	0	-	247300518	247329245	789624	8	3076,114,108,133,108,77,184,57,	0,10274,11498,12123,24497,24953,30482,30988,
#Deleted in new
chr1	247328675	247331846	chr1:247328675-247331846	0	-	247328675	247328675	8553170	5	191,427,116,216,57,	0,513,1290,2756,3114,
#Deleted in new
chr1	247328727	247331845	chr1:247328727-247331845	0	-	247328727	247328727	8553170	5	139,380,116,216,56,	0,461,1238,2704,3062,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	247416155	247449102	chr1:247416155-247449102	1	+	247418794	247448504	0	9	38,1025,120,1753,171,171,171,171,698,	0,1897,7074,7691,13429,17947,27816,28495,32249,
#Partially deleted in new
chr1	247416155	247449108	chr1:247416155-247449108	3	+	247418794	247448504	0	11	38,62,321,120,1753,171,171,171,171,171,704,	0,2073,2601,7074,7691,13429,17947,19814,27816,28495,32249,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr1	247418048	247448817	chr1:247418048-247448817	1	+	247418794	247448504	0	9	1029,120,1753,171,171,171,171,171,413,	0,5181,5798,11536,16054,17921,25923,26602,30356,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	247418048	247448817	chr1:247418048-247448817	1	+	247418794	247448504	0	7	1029,120,1753,171,171,171,413,	0,5181,5798,16054,25923,26602,30356,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr1	247418051	247448817	chr1:247418051-247448817	1	+	247418794	247448504	0	8	1026,120,1753,171,171,171,171,413,	0,5178,5795,11533,16051,25920,26599,30353,
#Partially deleted in new
chr1	247418619	247425792	chr1:247418619-247425792	1	+	247418794	247425603	0	3	458,120,1946,	0,4610,5227,
#Partially deleted in new
chr1	247418729	247448595	chr1:247418729-247448595	1	+	247418794	247448504	0	9	348,120,1753,171,111,171,171,171,191,	0,4500,5117,10855,15433,17240,25242,25921,29675,
#Partially deleted in new
chr1	247418794	247448504	chr1:247418794-247448504	1	+	247418794	247448504	0	8	283,120,1753,171,171,171,171,100,	0,4435,5052,15308,17175,25177,25856,29610,
#Partially deleted in new
chr1	247418935	247448993	chr1:247418935-247448993	0	+	247418935	247425603	789624	9	142,120,1924,171,171,171,171,171,589,	0,4294,4911,10649,15167,17034,25036,25715,29469,
#Partially deleted in new
chr1	247443906	247448576	chr1:247443906-247448576	0	+	247443906	247443906	8553170	3	236,171,172,	0,744,4498,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	247449117	247458105	chr1:247449117-247458105	1	-	247451028	247451982	789624	2	5947,467,	0,8521,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	247449117	247458105	chr1:247449117-247458105	3	-	247451028	247451982	789624	3	3966,112,467,	0,5835,8521,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	247449117	247458008	chr1:247449117-247458008	0	-	247449117	247449117	8553170	5	2794,126,117,112,370,	0,3002,3207,5835,8521,
#Deleted in new
chr1	247450952	247452006	chr1:247450952-247452006	1	-	247451028	247451982	789624	1	1054,	0,
#Deleted in new
chr1	247488092	247492415	chr1:247488092-247492415	7	+	247488092	247488092	16724991	2	299,1298,	0,3025,
#Deleted in new
chr1	247491067	247492147	chr1:247491067-247492147	4	+	247491067	247491067	16724991	1	1080,	0,
#Deleted in new
chr1	247491127	247492090	chr1:247491127-247492090	5	+	247491127	247491127	16724991	1	963,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	247507057	247575020	chr1:247507057-247575020	1	+	247563596	247574382	789624	6	176,115,60,50,29,878,	0,19882,49349,56532,58873,67085,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	247507057	247577690	chr1:247507057-247577690	3	+	247549191	247574382	789624	7	176,115,85,60,50,29,3548,	0,19882,42078,49349,56532,58873,67085,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	247507072	247574881	chr1:247507072-247574881	1	+	247563596	247574382	789624	5	161,115,50,29,739,	0,19867,56517,58858,67070,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr1	247507114	247577667	chr1:247507114-247577667	1	+	247549191	247574382	789624	7	119,115,116,176,50,29,3525,	0,19825,31561,41930,56475,58816,67028,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	247507119	247577688	chr1:247507119-247577688	1	+	247549191	247574382	789624	6	114,115,176,50,29,3546,	0,19820,41925,56470,58811,67023,
#Partially deleted in new
chr1	247507123	247574215	chr1:247507123-247574215	0	+	247549191	247574215	789624	7	110,115,85,60,50,29,73,	0,19816,42012,49283,56466,58807,67019,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	247518431	247575648	chr1:247518431-247575648	1	+	247563596	247574382	789624	5	177,60,50,29,1506,	0,37975,45158,47499,55711,
#Partially deleted in new
chr1	247518451	247574293	chr1:247518451-247574293	0	+	247563596	247574293	789624	6	157,115,60,50,29,151,	0,8488,37955,45138,47479,55691,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	247518451	247577690	chr1:247518451-247577690	1	+	247563596	247574382	789624	6	157,115,60,50,29,3548,	0,8488,37955,45138,47479,55691,
#Partially deleted in new
chr1	247518473	247549119	chr1:247518473-247549119	0	+	247518473	247518473	8553170	4	135,233,115,75,	0,701,8466,30571,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	247524676	247536440	chr1:247524676-247536440	1	-	247531548	247532511	789624	3	7864,330,273,	0,8830,11491,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	247524676	247536440	chr1:247524676-247536440	3	-	247531548	247532511	789624	3	7864,372,273,	0,8830,11491,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	247524678	247530804	chr1:247524678-247530804	0	-	247524678	247524678	789624	4	1255,377,66,215,	0,1691,3678,5911,
#Deleted in new
chr1	247530132	247532613	chr1:247530132-247532613	3	-	247531548	247532511	8553170	1	2481,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr1	247549087	247577690	chr1:247549087-247577690	1	+	247549191	247574382	789624	5	133,60,50,29,3548,	0,7319,14502,16843,25055,
#Partially deleted in new
chr1	247565638	247640854	chr1:247565638-247640854	3	-	247565638	247565638	8553170	3	313,81,144,	0,70216,75072,
#Partially deleted in new
chr1	247565907	247640203	chr1:247565907-247640203	1	-	247565907	247565907	8553170	3	44,81,356,	0,69947,73940,
#Deleted in new
chr1	247588359	247589313	chr1:247588359-247589313	3	+	247588359	247589313	789624	1	954,	0,
#Deleted in new
chr1	247605585	247606515	chr1:247605585-247606515	3	+	247605585	247606515	789624	1	930,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	247607125	247607201	chr1:247607125-247607201	3	-	247607125	247607125	8553170	1	76,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	247617142	247622372	chr1:247617142-247622372	7	+	247617142	247617142	16724991	2	258,2751,	0,2479,
#Deleted in new
chr1	247619644	247620562	chr1:247619644-247620562	5	+	247619644	247619644	16724991	1	918,	0,
#Partially deleted in new
chr1	247639748	247747062	chr1:247639748-247747062	3	+	247639748	247639748	8553170	2	681,860,	0,106454,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	247640048	247663843	chr1:247640048-247663843	0	+	247640048	247640048	8553170	2	381,341,	0,23454,
#Deleted in new
chr1	247666886	247667841	chr1:247666886-247667841	7	+	247666886	247666886	16724991	1	955,	0,
#Partially deleted in new
chr1	247670811	247679739	chr1:247670811-247679739	3	-	247672117	247673041	789624	2	2468,100,	0,8828,
#Deleted in new
chr1	247672017	247673063	chr1:247672017-247673063	1	-	247672117	247673041	789624	1	1046,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	247711435	247716646	chr1:247711435-247716646	0	-	247711435	247711435	8553170	3	998,64,316,	0,2455,4895,
#Partially deleted in new
chr1	247711435	247716646	chr1:247711435-247716646	1	-	247711828	247712755	789624	2	1382,316,	0,4895,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	247711435	247716646	chr1:247711435-247716646	3	-	247711828	247712755	789624	3	1382,64,316,	0,2455,4895,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	247711435	247716646	chr1:247711435-247716646	0	-	247711435	247711435	8553170	3	652,64,316,	0,2455,4895,
#Partially deleted in new
chr1	247711435	247716646	chr1:247711435-247716646	0	-	247711435	247711435	8553170	2	998,316,	0,4895,
#Partially deleted in new
chr1	247711742	247712803	chr1:247711742-247712803	1	-	247711828	247712755	789624	1	1061,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	247711812	247723764	chr1:247711812-247723764	3	-	247713927	247723764	789624	3	275,64,114,	0,2078,11838,
#Partially deleted in new
chr1	247722956	247723761	chr1:247722956-247723761	0	-	247723430	247723761	789624	3	278,102,111,	0,396,694,
#Partially deleted in new
chr1	247723098	247724043	chr1:247723098-247724043	3	-	247723098	247724043	789624	1	945,	0,
#Partially deleted in new
chr1	247738614	247739559	chr1:247738614-247739559	3	+	247738614	247739559	789624	1	945,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	247754845	247760556	chr1:247754845-247760556	3	-	247757461	247758406	789624	2	3574,145,	0,5566,
#Partially deleted in new
chr1	247757373	247758680	chr1:247757373-247758680	1	-	247757461	247758406	789624	1	1307,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	247770168	247779524	chr1:247770168-247779524	3	+	247774909	247775836	8553170	2	86,4802,	0,4554,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	247770168	247779524	chr1:247770168-247779524	0	+	247770168	247770168	8553170	2	86,4290,	0,5066,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	247814659	247824119	chr1:247814659-247824119	3	-	247814799	247815729	789624	3	1085,115,167,	0,4403,9293,
#Deleted in new
chr1	247814799	247815729	chr1:247814799-247815729	1	-	247814799	247815729	789624	1	930,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	247827485	247828502	chr1:247827485-247828502	7	+	247827485	247827485	16724991	1	1017,	0,
#Deleted in new
chr1	247833348	247834288	chr1:247833348-247834288	7	-	247833348	247833348	16724991	1	940,	0,
#Deleted in new
chr1	247840927	247841896	chr1:247840927-247841896	3	-	247840927	247841896	789624	1	969,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr1	247857198	247878205	chr1:247857198-247878205	3	+	247857246	247876489	789624	6	468,96,231,23,101,2306,	0,3418,7506,10646,10764,18701,
#Partially deleted in new
chr1	247895586	247896531	chr1:247895586-247896531	3	+	247895586	247896531	789624	1	945,	0,
#Deleted in new
chr1	247920251	247921956	chr1:247920251-247921956	3	+	247921017	247921956	789624	2	267,959,	0,746,
#Deleted in new
chr1	247921017	247921956	chr1:247921017-247921956	1	+	247921017	247921956	789624	1	939,	0,
#Partially deleted in new
chr1	247924888	247935339	chr1:247924888-247935339	3	+	247933768	247934755	789624	2	280,1593,	0,8858,
#Deleted in new
chr1	247936060	247937513	chr1:247936060-247937513	7	-	247936060	247936060	16724991	1	1453,	0,
#Deleted in new
chr1	247938972	247939659	chr1:247938972-247939659	7	+	247938972	247938972	16724991	1	687,	0,
#Partially deleted in new
chr1	247948857	247949796	chr1:247948857-247949796	3	+	247948857	247949796	789624	1	939,	0,
#Partially deleted in new
chr1	247965232	247966386	chr1:247965232-247966386	1	+	247965376	247966339	789624	1	1154,	0,
#Partially deleted in new
chr1	247965331	247966339	chr1:247965331-247966339	3	+	247965331	247966339	789624	1	1008,	0,
#Partially deleted in new
chr1	247974740	247975653	chr1:247974740-247975653	7	+	247974740	247974740	16724991	1	913,	0,
#Partially deleted in new
chr1	247980871	247991204	chr1:247980871-247991204	7	+	247980871	247980871	16724991	2	64,959,	0,9374,
#Partially deleted in new
chr1	247990266	247991204	chr1:247990266-247991204	5	+	247990266	247990266	16724991	1	938,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	247996999	247997096	chr1:247996999-247997096	3	+	247996999	247996999	8553170	1	97,	0,
#Partially deleted in new
chr1	248003128	248004068	chr1:248003128-248004068	7	+	248003128	248003128	16724991	1	940,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	248013659	248024276	chr1:248013659-248024276	3	+	248021947	248022886	789624	2	79,2350,	0,8267,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	248029119	248029221	chr1:248029119-248029221	3	+	248029119	248029119	8553170	1	102,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	248030069	248042305	chr1:248030069-248042305	1	+	248038267	248039206	789624	3	166,75,4059,	0,5480,8177,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	248030069	248042305	chr1:248030069-248042305	3	+	248038267	248039206	789624	2	166,4059,	0,8177,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	248038171	248039305	chr1:248038171-248039305	1	+	248038267	248039206	789624	1	1134,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	248045787	248045889	chr1:248045787-248045889	3	+	248045787	248045787	8553170	1	102,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	248046835	248063407	chr1:248046835-248063407	1	+	248060681	248061620	789624	2	45,2747,	0,13825,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	248046835	248063407	chr1:248046835-248063407	3	+	248060681	248061620	789624	3	45,54,2747,	0,4352,13825,
#Partially deleted in new
chr1	248083521	248087522	chr1:248083521-248087522	7	-	248083521	248083521	16724991	2	1083,31,	0,3970,
#Deleted in new
chr1	248083633	248084596	chr1:248083633-248084596	5	-	248083633	248083633	16724991	1	963,	0,
#Partially deleted in new
chr1	248095183	248101103	chr1:248095183-248101103	1	+	248099375	248100314	789624	3	71,125,1746,	0,3467,4174,
#Partially deleted in new
chr1	248095183	248101103	chr1:248095183-248101103	3	+	248099375	248100314	789624	2	71,1746,	0,4174,
#Deleted in new
chr1	248097275	248101103	chr1:248097275-248101103	1	+	248099375	248100314	789624	3	77,125,1746,	0,1375,2082,
#Deleted in new
chr1	248121931	248122882	chr1:248121931-248122882	7	+	248121931	248121931	16724991	1	951,	0,
#Deleted in new
chr1	248145147	248146086	chr1:248145147-248146086	3	+	248145147	248146086	789624	1	939,	0,
#Partially deleted in new
chr1	248174820	248181067	chr1:248174820-248181067	1	+	248179985	248181029	789624	3	51,78,1100,	0,3097,5147,
#Partially deleted in new
chr1	248174820	248181067	chr1:248174820-248181067	3	+	248179985	248181029	789624	2	51,1100,	0,5147,
#Deleted in new
chr1	248179985	248181029	chr1:248179985-248181029	1	+	248179985	248181029	789624	1	1044,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	248197264	248212925	chr1:248197264-248212925	3	+	248203067	248204006	789624	2	37,9876,	0,5785,
#Deleted in new
chr1	248203029	248204090	chr1:248203029-248204090	1	+	248203067	248204006	789624	1	1061,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	248231416	248244679	chr1:248231416-248244679	3	+	248238928	248239864	789624	2	164,5770,	0,7493,
#Partially deleted in new
chr1	248238928	248239864	chr1:248238928-248239864	1	+	248238928	248239864	789624	1	936,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	248269916	248277976	chr1:248269916-248277976	3	-	248272851	248273814	789624	2	3906,212,	0,7848,
#Partially deleted in new
chr1	248272770	248273836	chr1:248272770-248273836	1	-	248272851	248273814	789624	1	1066,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	248290138	248303424	chr1:248290138-248303424	3	-	248294615	248295578	789624	3	5448,181,79,	0,11234,13207,
#Deleted in new
chr1	248294534	248295600	chr1:248294534-248295600	1	-	248294615	248295578	789624	1	1066,	0,
#Deleted in new
chr1	248323629	248324568	chr1:248323629-248324568	3	-	248323629	248324568	789624	1	939,	0,
#Deleted in new
chr1	248348774	248349713	chr1:248348774-248349713	3	+	248348774	248349713	789624	1	939,	0,
#Deleted in new
chr1	248361580	248362627	chr1:248361580-248362627	3	+	248361580	248362627	789624	1	1047,	0,
#Deleted in new
chr1	248361664	248362627	chr1:248361664-248362627	1	+	248361664	248362627	789624	1	963,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	248375745	248391811	chr1:248375745-248391811	3	+	248387608	248388535	789624	3	309,154,4207,	0,8965,11859,
#Deleted in new
chr1	248387608	248388535	chr1:248387608-248388535	1	+	248387608	248388535	789624	1	927,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	248403047	248408020	chr1:248403047-248408020	3	+	248406147	248407104	789624	2	198,1906,	0,3067,
#Deleted in new
chr1	248405994	248407104	chr1:248405994-248407104	1	+	248405994	248407104	789624	1	1110,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	248436358	248444316	chr1:248436358-248444316	3	+	248441181	248442133	8553170	2	270,3139,	0,4819,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	248439144	248444316	chr1:248439144-248444316	1	+	248441181	248442133	8553170	2	324,3139,	0,2033,
#Partially deleted in new
chr1	248445511	248455725	chr1:248445511-248455725	1	+	248452797	248453772	789624	4	158,223,199,2950,	0,1077,3682,7264,
#Partially deleted in new
chr1	248445511	248455725	chr1:248445511-248455725	3	+	248452797	248453772	789624	3	158,223,2950,	0,1077,7264,
#Deleted in new
chr1	248452775	248453829	chr1:248452775-248453829	1	+	248452797	248453772	789624	1	1054,	0,
#Partially deleted in new
chr1	248473350	248474307	chr1:248473350-248474307	3	+	248473350	248474307	789624	1	957,	0,
#Partially deleted in new
chr1	248484244	248485484	chr1:248484244-248485484	3	-	248484244	248484244	8553170	2	651,316,	0,924,
#Partially deleted in new
chr1	248488588	248491113	chr1:248488588-248491113	3	+	248488588	248489536	789624	1	2525,	0,
#Partially deleted in new
chr1	248498307	248498649	chr1:248498307-248498649	7	+	248498307	248498307	16724991	1	342,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	248508072	248527337	chr1:248508072-248527337	3	+	248521646	248522597	789624	2	357,5727,	0,13538,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	248509535	248527337	chr1:248509535-248527337	1	+	248521646	248522597	789624	2	113,5727,	0,12075,
#Partially deleted in new
chr1	248521614	248522663	chr1:248521614-248522663	1	+	248521646	248522597	789624	1	1049,	0,
#Partially deleted in new
chr1	248548755	248563463	chr1:248548755-248563463	3	+	248548755	248548755	8553170	2	91,864,	0,13844,
#Partially deleted in new
chr1	248549443	248549762	chr1:248549443-248549762	7	-	248549443	248549443	16724991	1	319,	0,
#Partially deleted in new
chr1	248556911	248562772	chr1:248556911-248562772	3	-	248558543	248559491	789624	2	2590,47,	0,5814,
#Partially deleted in new
chr1	248558482	248559496	chr1:248558482-248559496	1	-	248558543	248559491	789624	1	1014,	0,
#Partially deleted in new
chr1	248562599	248563839	chr1:248562599-248563839	1	+	248562599	248562599	8553170	2	316,651,	0,589,
#Partially deleted in new
chr1	248573800	248574757	chr1:248573800-248574757	3	-	248573800	248574757	789624	1	957,	0,
#Partially deleted in new
chr1	248590486	248597700	chr1:248590486-248597700	3	-	248592829	248593768	789624	2	3310,209,	0,7005,
#Partially deleted in new
chr1	248592750	248593799	chr1:248592750-248593799	1	-	248592829	248593768	789624	1	1049,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	248594924	248595033	chr1:248594924-248595033	3	-	248594924	248594924	8553170	1	109,	0,
#Partially deleted in new
chr1	248601415	248601869	chr1:248601415-248601869	7	+	248601415	248601415	16724991	1	454,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr1	248623556	248635091	chr1:248623556-248635091	3	-	248626177	248627128	789624	2	3716,54,	0,11481,
#Partially deleted in new
chr1	248626118	248627190	chr1:248626118-248627190	1	-	248626177	248627128	789624	1	1072,	0,
#Partially deleted in new
chr1	248636355	248645278	chr1:248636355-248645278	3	-	248638286	248639258	789624	2	2925,32,	0,8891,
#Partially deleted in new
chr1	248638286	248639258	chr1:248638286-248639258	1	-	248638286	248639258	789624	1	972,	0,
#Partially deleted in new
chr1	248649837	248655528	chr1:248649837-248655528	1	-	248649930	248650884	789624	2	1051,85,	0,5606,
#Partially deleted in new
chr1	248649837	248655528	chr1:248649837-248655528	3	-	248649930	248650884	789624	3	1051,149,85,	0,1586,5606,
#Partially deleted in new
chr1	248649930	248650884	chr1:248649930-248650884	1	-	248649930	248650884	789624	1	954,	0,
#Partially deleted in new
chr1	248681368	248682304	chr1:248681368-248682304	3	-	248681368	248682304	789624	1	936,	0,
#Partially deleted in new
chr1	248691759	248699110	chr1:248691759-248699110	5	+	248691759	248691759	16724991	5	37,99,167,177,252,	0,360,844,5271,7099,
#Partially deleted in new
chr1	248692151	248698932	chr1:248692151-248698932	5	+	248692151	248692151	16724991	3	67,177,74,	0,4879,6707,
#Partially deleted in new
chr1	248708201	248708641	chr1:248708201-248708641	7	+	248708201	248708201	16724991	1	440,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	248718648	248745279	chr1:248718648-248745279	0	-	248722179	248745279	789624	3	159,936,138,	0,2621,26493,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	248721992	248722201	chr1:248721992-248722201	7	-	248721992	248721992	16724991	1	209,	0,
#Partially deleted in new
chr1	248739414	248755739	chr1:248739414-248755739	3	-	248739610	248751081	789624	7	435,138,165,120,101,148,35,	0,5727,8874,11109,11615,15824,16290,
#Partially deleted in new
chr1	248771634	248773792	chr1:248771634-248773792	7	-	248771634	248771634	16724991	1	2158,	0,
#Deleted in new
chr1	248810445	248814173	chr1:248810445-248814173	0	-	248810445	248810445	8553170	2	1925,1185,	0,2543,
#Partially deleted in new
chr1	248810450	248826633	chr1:248810450-248826633	3	-	248811899	248824935	789624	7	1920,174,162,129,63,614,799,	0,2538,3998,6083,6371,14302,15384,
#Partially deleted in new
chr1	248810451	248825635	chr1:248810451-248825635	0	-	248810451	248810451	8553170	9	1919,174,162,167,129,63,510,115,883,	0,2537,3997,4259,6082,6370,9951,10695,14301,
#Deleted in new
chr1	248816029	248816846	chr1:248816029-248816846	0	-	248816029	248816029	8553170	2	633,25,	0,792,
#Deleted in new
chr1	248826376	248826443	chr1:248826376-248826443	3	+	248826376	248826376	5263520	1	67,	0,
#Partially deleted in new
chr1	248838209	248847208	chr1:248838209-248847208	0	+	248838209	248838209	8553170	4	161,140,97,157,	0,6287,7356,8842,
#Partially deleted in new
chr1	248838279	248849517	chr1:248838279-248849517	3	+	248847274	248848633	789624	4	272,154,97,2466,	0,6203,7286,8772,
#Partially deleted in new
chr1	248838330	248847285	chr1:248838330-248847285	0	+	248847274	248847285	8553170	4	221,154,97,111,	0,6152,7235,8844,
#Partially deleted in new
chr1	248838827	248847483	chr1:248838827-248847483	0	+	248847274	248847483	789624	4	247,154,97,432,	0,5655,6738,8224,
#Partially deleted in new
chr1	248839005	248847220	chr1:248839005-248847220	0	+	248839005	248839005	8553170	4	139,154,97,169,	0,5477,6560,8046,
#Partially deleted in new
chr1	248839089	248847101	chr1:248839089-248847101	0	+	248839089	248839089	8553170	5	141,58,154,97,50,	0,3633,5393,6476,7962,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr1	248839153	248847385	chr1:248839153-248847385	0	+	248847274	248847385	789624	4	298,154,97,334,	0,5329,6412,7898,
#Partially deleted in new
chr1	248850005	248859072	chr1:248850005-248859072	3	-	248850209	248858309	0	12	511,100,115,79,78,222,135,49,264,32,191,155,	0,676,3931,5374,5552,5719,6282,6508,7228,7822,8125,8912,
#Partially deleted in new
chr1	248850005	248858713	chr1:248850005-248858713	0	-	248857953	248858309	0	10	511,100,115,79,78,222,135,49,832,583,	0,676,3931,5374,5552,5719,6282,6508,7228,8125,
#Partially deleted in new
chr1	248850007	248859085	chr1:248850007-248859085	1	-	248850209	248858309	0	11	509,100,115,79,78,222,49,264,32,191,71,	0,674,3929,5372,5550,5717,6506,7226,7820,8123,9007,
#Partially deleted in new
chr1	248850008	248857884	chr1:248850008-248857884	0	-	248850008	248850008	8553170	8	508,100,115,79,389,135,49,651,	0,673,3928,5371,5549,6279,6505,7225,
#Deleted in new
chr1	248850023	248855943	chr1:248850023-248855943	0	-	248850209	248855943	789624	5	493,100,115,79,219,	0,658,3913,5356,5701,
#Partially deleted in new
chr1	248850041	248857497	chr1:248850041-248857497	0	-	248855815	248857497	789624	8	475,100,115,79,389,50,49,264,	0,640,3895,5338,5516,6331,6472,7192,
#Partially deleted in new
chr1	248850044	248859068	chr1:248850044-248859068	0	-	248857329	248858309	789624	12	472,100,85,115,79,389,50,49,203,32,191,151,	0,637,818,3892,5335,5513,6328,6469,7189,7783,8086,8873,
#Deleted in new
chr1	248850044	248855458	chr1:248850044-248855458	0	-	248850903	248855458	789624	5	472,100,85,115,79,	0,637,818,3892,5335,
#Partially deleted in new
chr1	248850065	248858860	chr1:248850065-248858860	1	-	248850209	248858514	0	12	451,100,115,79,78,222,135,49,264,32,191,349,	0,616,3871,5314,5492,5659,6222,6448,7168,7762,8065,8446,
#Partially deleted in new
chr1	248850281	248859065	chr1:248850281-248859065	0	-	248850281	248850281	8553170	9	235,115,79,389,135,49,203,191,148,	0,3655,5098,5276,6006,6232,6952,7849,8636,
#Deleted in new
chr1	248850376	248854523	chr1:248850376-248854523	0	-	248850376	248850376	8553170	3	140,100,587,	0,305,3560,
#Deleted in new
chr1	248850383	248856086	chr1:248850383-248856086	0	-	248850383	248850383	8553170	6	133,100,115,79,78,362,	0,298,3553,4996,5174,5341,
#Partially deleted in new
chr1	248855383	248858119	chr1:248855383-248858119	0	-	248855383	248855383	8553170	7	75,78,219,135,49,203,292,	0,174,341,904,1130,1850,2444,
#Partially deleted in new
chr1	248855594	248857637	chr1:248855594-248857637	0	-	248855594	248855594	8553170	3	352,49,404,	0,919,1639,
#Partially deleted in new
chr1	248855727	248859018	chr1:248855727-248859018	0	-	248857953	248858309	789624	7	219,50,49,264,190,191,101,	0,645,786,1506,2100,2403,3190,
#Partially deleted in new
chr1	248855781	248857772	chr1:248855781-248857772	0	-	248855781	248855781	8553170	5	162,135,49,264,34,	0,506,732,1452,1957,
#Partially deleted in new
chr1	248856514	248858529	chr1:248856514-248858529	0	-	248857953	248858309	789624	4	48,264,190,399,	0,719,1313,1616,
#Deleted in new
chr1	248857272	248858324	chr1:248857272-248858324	0	-	248857953	248858309	789624	3	164,190,194,	0,555,858,
#Deleted in new
chr1	248857312	248859067	chr1:248857312-248859067	0	-	248857312	248858309	789624	4	185,32,289,150,	0,515,818,1605,
#Deleted in new
chr1	248857364	248859083	chr1:248857364-248859083	0	-	248857364	248857364	8553170	4	72,32,191,166,	0,463,766,1553,
#Deleted in new
chr1	248857390	248859085	chr1:248857390-248859085	0	-	248858003	248858309	789624	4	107,207,191,71,	0,437,740,1624,
#Deleted in new
chr1	248857439	248859066	chr1:248857439-248859066	0	-	248857439	248857439	8553170	2	882,149,	0,1478,
#Deleted in new
chr1	248857468	248859085	chr1:248857468-248859085	0	-	248858003	248858309	789624	4	29,207,191,168,	0,359,662,1449,
#Deleted in new
chr1	248857556	248859072	chr1:248857556-248859072	0	-	248857556	248857556	8553170	3	303,191,58,	0,574,1458,
#Deleted in new
chr1	248857568	248859116	chr1:248857568-248859116	0	-	248857568	248857568	8553170	3	291,191,199,	0,562,1349,
#Deleted in new
chr1	248857609	248858695	chr1:248857609-248858695	0	-	248857609	248857609	8553170	2	712,184,	0,902,
#Deleted in new
chr1	248857651	248859085	chr1:248857651-248859085	0	-	248857651	248857651	8553170	3	194,191,168,	0,479,1266,
#Deleted in new
chr1	248857668	248859071	chr1:248857668-248859071	0	-	248857668	248857668	8553170	3	349,191,154,	0,462,1249,
#Deleted in new
chr1	248857864	248859144	chr1:248857864-248859144	0	-	248857864	248857864	8553170	2	457,130,	0,1150,
#Deleted in new
chr1	248857974	248859033	chr1:248857974-248859033	0	-	248857974	248857974	8553170	2	411,116,	0,943,
#Partially deleted in new
chr1	248859163	248864796	chr1:248859163-248864796	3	+	248859163	248859163	8553170	3	83,159,220,	0,3465,5413,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr1	248906195	248919946	chr1:248906195-248919946	1	+	248917337	248918363	789624	3	147,64,2668,	0,7620,11083,
#Partially deleted in new
chr1	248906242	248918573	chr1:248906242-248918573	3	+	248913862	248918363	789624	3	100,64,1972,	0,7573,10359,
#Partially deleted in new
chr1	248906371	248917401	chr1:248906371-248917401	0	+	248906371	248906371	8553170	3	95,64,123,	0,7444,10907,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr1	248912689	248912795	chr1:248912689-248912795	3	-	248912689	248912689	8553170	1	106,	0,
#Partially deleted in new
chr1	248936580	248937043	chr1:248936580-248937043	7	+	248936580	248936580	16724991	1	463,	0,
#Deleted in new
chr10	14060	14604	chr10:14060-14604	3	-	14060	14060	8553170	2	239,108,	0,436,
#Deleted in new
chr10	14137	16544	chr10:14137-16544	0	-	14137	14137	8553170	2	162,43,	0,2364,
#Deleted in new
chr10	44711	46884	chr10:44711-46884	7	+	44711	44711	16724991	6	190,253,97,49,115,43,	0,240,597,1122,1533,2130,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	46891	74163	chr10:46891-74163	1	-	47056	48893	789624	4	1223,194,826,195,	0,1827,2516,27077,
#Deleted in new
chr10	46952	49589	chr10:46952-49589	3	-	47056	49238	789624	4	1162,111,109,408,	0,1662,1851,2229,
#Deleted in new
chr10	46952	49277	chr10:46952-49277	1	-	47056	49238	789624	3	1162,109,96,	0,1851,2229,
#Deleted in new
chr10	47056	49293	chr10:47056-49293	1	-	48054	49238	789624	4	1081,111,109,112,	0,1558,1747,2125,
#Deleted in new
chr10	47493	49269	chr10:47493-49269	1	-	48054	49238	789624	3	621,111,88,	0,1121,1688,
#Deleted in new
chr10	47577	49521	chr10:47577-49521	0	-	48545	48893	789624	4	537,301,109,114,	0,847,1226,1830,
#Deleted in new
chr10	47704	49269	chr10:47704-49269	0	-	47704	47704	8553170	3	410,298,88,	0,910,1477,
#Deleted in new
chr10	80393	86265	chr10:80393-86265	7	-	80393	80393	16724991	7	571,84,109,115,193,102,138,	0,2383,3831,4238,4899,5202,5734,
#Partially deleted in new
chr10	134464	254626	chr10:134464-254626	1	+	209892	252470	789624	13	322,135,160,78,93,88,56,119,208,69,273,186,2279,	0,45529,75424,102373,103120,104973,105591,107556,112301,112933,113871,114438,117883,
#Partially deleted in new
chr10	134464	252470	chr10:134464-252470	1	+	180012	252470	0	15	322,135,160,162,78,93,88,56,78,119,208,69,273,186,123,	0,45529,75424,86730,102373,103120,104973,105591,106428,107556,112301,112933,113871,114438,117883,
#Partially deleted in new
chr10	134464	237651	chr10:134464-237651	0	+	180012	237651	789624	5	322,135,160,78,67,	0,45529,75424,102373,103120,
#Partially deleted in new
chr10	134483	254626	chr10:134483-254626	1	+	180012	252470	789624	14	409,135,160,78,93,88,53,78,119,208,69,273,186,2279,	0,45510,75405,102354,103101,104954,105575,106409,107537,112282,112914,113852,114419,117864,
#Partially deleted in new
chr10	134483	254626	chr10:134483-254626	1	+	180012	252470	0	13	409,135,160,78,88,56,78,119,208,69,273,186,2279,	0,45510,75405,102354,104954,105572,106409,107537,112282,112914,113852,114419,117864,
#Partially deleted in new
chr10	134702	249261	chr10:134702-249261	1	+	180012	249109	0	14	190,135,160,162,78,93,88,53,78,119,208,69,273,359,	0,45291,75186,86492,102135,102882,104735,105356,106190,107318,112063,112695,113633,114200,
#Partially deleted in new
chr10	135068	254637	chr10:135068-254637	3	+	180012	252470	0	15	234,135,160,162,78,93,88,56,78,119,208,69,273,186,2290,	0,44925,74820,86126,101769,102516,104369,104987,105824,106952,111697,112329,113267,113834,117279,
#Partially deleted in new
chr10	135483	254626	chr10:135483-254626	1	+	180012	252470	0	14	76,135,160,78,93,88,56,78,119,208,69,273,186,2279,	0,44510,74405,101354,102101,103954,104572,105409,106537,111282,111914,112852,113419,116864,
#Partially deleted in new
chr10	135483	252470	chr10:135483-252470	1	+	180012	252470	789624	13	76,135,160,78,93,88,56,119,208,69,273,186,123,	0,44510,74405,101354,102101,103954,104572,106537,111282,111914,112852,113419,116864,
#Partially deleted in new
chr10	135508	254634	chr10:135508-254634	1	+	180012	252470	789624	14	51,135,160,162,78,88,56,78,119,208,69,273,186,2287,	0,44485,74380,85686,101329,103929,104547,105384,106512,111257,111889,112827,113394,116839,
#Deleted in new
chr10	147819	148751	chr10:147819-148751	7	-	147819	147819	16724991	2	408,308,	0,624,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	154830	154943	chr10:154830-154943	7	-	154830	154830	16724991	1	113,	0,
#Partially deleted in new
chr10	179989	252580	chr10:179989-252580	1	+	180012	252470	0	12	139,160,78,88,56,78,119,208,69,273,186,233,	0,29899,56848,59448,60066,60903,62031,66776,67408,68346,68913,72358,
#Partially deleted in new
chr10	179993	253256	chr10:179993-253256	1	+	197940	252470	789624	15	135,95,160,162,78,93,88,56,78,119,208,69,273,186,909,	0,17917,29895,41201,56844,57591,59444,60062,60899,62027,66772,67404,68342,68909,72354,
#Partially deleted in new
chr10	179993	237663	chr10:179993-237663	0	+	180012	237663	789624	6	135,160,45,162,78,79,	0,29895,38461,41201,56844,57591,
#Partially deleted in new
chr10	180012	249261	chr10:180012-249261	1	+	180012	249109	0	13	116,160,162,78,93,88,56,78,119,208,69,273,359,	0,29876,41182,56825,57572,59425,60043,60880,62008,66753,67385,68323,68890,
#Partially deleted in new
chr10	197940	254626	chr10:197940-254626	1	+	197940	252470	789624	14	65,160,162,78,93,88,56,78,119,208,69,273,186,2279,	0,11948,23254,38897,39644,41497,42115,42952,44080,48825,49457,50395,50962,54407,
#Partially deleted in new
chr10	239961	246999	chr10:239961-246999	0	+	239961	239961	8553170	4	150,78,119,234,	0,931,2059,6804,
#Deleted in new
chr10	244470	248531	chr10:244470-248531	0	+	244470	244470	8553170	4	130,208,69,196,	0,2295,2927,3865,
#Partially deleted in new
chr10	274189	486558	chr10:274189-486558	1	-	277324	486558	789624	36	3388,124,175,75,58,62,171,169,131,110,112,122,124,81,110,202,115,209,137,140,115,120,94,65,103,110,124,111,92,198,120,135,210,126,111,100,	0,7010,9082,12083,14174,35841,52816,55243,67009,70619,70809,74451,75141,82236,83638,88300,89007,90184,92085,95304,108457,109837,110356,113555,115801,116074,116550,124919,134736,139723,141579,144875,148634,166681,198249,212269,
#Partially deleted in new
chr10	274197	689668	chr10:274197-689668	3	-	277324	689578	789624	37	3380,124,175,75,58,62,171,169,131,110,112,122,124,81,110,202,115,209,137,140,115,120,94,65,103,110,124,111,92,198,120,135,210,126,111,72,175,	0,7002,9074,12075,14166,35833,52808,55235,67001,70611,70801,74443,75133,82228,83630,88292,88999,90176,92077,95296,108449,109829,110348,113547,115793,116066,116542,124911,134728,139715,141571,144867,148626,166673,198241,212261,415296,
#Partially deleted in new
chr10	277322	689668	chr10:277322-689668	1	-	277324	689578	789624	39	255,124,175,75,58,62,30,171,169,131,110,112,122,124,81,110,202,115,209,137,140,115,120,94,65,103,110,124,111,92,198,120,135,210,126,111,168,72,175,	0,3877,5949,8950,11041,32708,34214,49683,52110,63876,67486,67676,71318,72008,79103,80505,85167,85874,87051,88952,92171,105324,106704,107223,110422,112668,112941,113417,121786,131603,136590,138446,141742,145501,163548,195116,207458,209136,412171,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	282014	282125	chr10:282014-282125	7	-	282014	282014	16724991	1	111,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	324638	329526	chr10:324638-329526	0	-	324893	329526	789624	3	381,171,94,	0,2367,4794,
#Partially deleted in new
chr10	364961	390016	chr10:364961-390016	0	-	364997	390016	789624	8	60,137,140,115,120,94,65,26,	0,1313,4532,17685,19065,19584,22783,25029,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	430238	430504	chr10:430238-430504	3	-	430238	430238	8553170	1	266,	0,
#Partially deleted in new
chr10	437560	441170	chr10:437560-441170	3	+	437560	437560	8553170	2	355,203,	0,3407,
#Deleted in new
chr10	628637	631255	chr10:628637-631255	3	+	628637	628637	789624	2	260,1397,	0,1221,
#Deleted in new
chr10	641688	641778	chr10:641688-641778	3	-	641688	641688	5263520	1	90,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	649947	652655	chr10:649947-652655	3	+	650110	651233	789624	3	231,152,1868,	0,343,840,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	650076	669581	chr10:650076-669581	1	+	650110	662962	789624	3	366,93,6791,	0,11949,12714,
#Deleted in new
chr10	663557	666622	chr10:663557-666622	0	+	663557	663557	8553170	2	145,405,	0,2660,
#Deleted in new
chr10	743991	744958	chr10:743991-744958	3	+	743991	743991	8553170	2	42,382,	0,585,
#Partially deleted in new
chr10	806913	931705	chr10:806913-931705	3	-	812925	885721	0	18	6300,109,125,165,46,252,107,210,54,111,104,137,79,141,148,60,120,278,	0,7828,8032,10811,13886,18151,18850,22471,22767,23953,29489,36018,38063,56829,57209,77533,78727,124514,
#Partially deleted in new
chr10	806913	815010	chr10:806913-815010	0	-	812925	815010	789624	4	1359,293,109,65,	0,6007,7828,8032,
#Partially deleted in new
chr10	809541	885762	chr10:809541-885762	1	-	812925	885721	0	17	3672,109,125,165,46,252,107,210,54,111,104,137,79,141,148,60,122,	0,5200,5404,8183,11258,15523,16222,19843,20139,21325,26861,33390,35435,54201,54581,74905,76099,
#Partially deleted in new
chr10	811805	820930	chr10:811805-820930	0	-	811805	811805	8553170	4	1408,109,125,3206,	0,2936,3140,5919,
#Partially deleted in new
chr10	812505	825244	chr10:812505-825244	0	-	812925	825244	789624	6	708,214,125,165,46,180,	0,2131,2440,5219,8294,12559,
#Partially deleted in new
chr10	814441	817846	chr10:814441-817846	0	-	814525	817846	789624	3	409,125,122,	0,504,3283,
#Partially deleted in new
chr10	814441	817846	chr10:814441-817846	0	-	814441	814441	8553170	3	409,125,122,	0,504,3283,
#Deleted in new
chr10	814761	815715	chr10:814761-815715	0	-	814761	814761	8553170	2	89,770,	0,184,
#Partially deleted in new
chr10	863742	931500	chr10:863742-931500	0	-	864242	885721	789624	6	141,148,71,60,120,73,	0,380,6270,20704,21898,67685,
#Partially deleted in new
chr10	863778	931624	chr10:863778-931624	0	-	863778	885721	789624	6	105,148,60,120,51,197,	0,344,20668,21862,60604,67649,
#Partially deleted in new
chr10	864153	931476	chr10:864153-931476	0	-	864153	864153	8553170	5	117,75,60,120,49,	0,5855,20293,21487,67274,
#Partially deleted in new
chr10	864240	903515	chr10:864240-903515	0	-	864240	885721	789624	5	30,60,120,136,86,	0,20206,21400,38967,39189,
#Partially deleted in new
chr10	933025	942743	chr10:933025-942743	3	+	933025	933025	789624	3	90,53,264,	0,9161,9454,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	971145	988341	chr10:971145-988341	3	-	971145	971145	8553170	2	1848,38,	0,17158,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	985225	988329	chr10:985225-988329	0	-	985225	985225	8553170	1	3104,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr10	988018	1019936	chr10:988018-1019936	3	+	988479	1017227	789624	17	509,171,104,137,101,93,192,66,90,111,78,52,101,198,66,144,2862,	0,4470,7910,8087,9189,10984,12658,12929,17799,18999,20939,21510,22401,24446,26228,27734,29056,
#Partially deleted in new
chr10	988461	1010517	chr10:988461-1010517	0	+	988461	988461	8553170	11	66,171,1203,93,192,66,90,111,78,52,98,	0,4027,7644,10541,12215,12486,17356,18556,20496,21067,21958,
#Partially deleted in new
chr10	988705	997308	chr10:988705-997308	0	+	992581	997308	789624	5	243,171,104,137,101,	0,3783,7223,7400,8502,
#Partially deleted in new
chr10	1005837	1007320	chr10:1005837-1007320	0	+	1005837	1005837	8553170	2	70,303,	0,1180,
#Partially deleted in new
chr10	1012399	1017197	chr10:1012399-1017197	0	+	1012399	1012399	8553170	4	263,66,144,123,	0,1847,3353,4675,
#Partially deleted in new
chr10	1018906	1025859	chr10:1018906-1025859	3	-	1019516	1024723	0	5	928,131,93,163,44,	0,1860,3776,5675,6909,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	1022665	1044201	chr10:1022665-1044201	3	+	1022665	1022665	789624	3	118,105,673,	0,14123,20863,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	1022667	1043683	chr10:1022667-1043683	1	+	1022667	1022667	789624	5	116,133,163,105,155,	0,12622,13146,14121,20861,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	1022667	1044198	chr10:1022667-1044198	0	+	1022667	1022667	789624	4	116,163,105,670,	0,13146,14121,20861,
#Partially deleted in new
chr10	1022673	1035921	chr10:1022673-1035921	1	+	1022673	1022673	8553170	3	110,217,108,	0,12616,13140,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	1036822	1044024	chr10:1036822-1044024	1	+	1036822	1036822	8553170	6	71,58,93,36,33,264,	0,6706,6766,6863,6903,6938,
#Partially deleted in new
chr10	1039151	1048883	chr10:1039151-1048883	3	-	1041186	1044140	0	5	2353,131,93,173,620,	0,3480,4149,4847,9112,
#Partially deleted in new
chr10	1039907	1049170	chr10:1039907-1049170	1	-	1041186	1049003	0	5	1597,131,93,173,307,	0,2724,3393,4091,8956,
#Partially deleted in new
chr10	1040902	1049103	chr10:1040902-1049103	0	-	1040902	1040902	789624	4	602,131,93,240,	0,1729,2398,7961,
#Partially deleted in new
chr10	1042548	1048397	chr10:1042548-1048397	0	-	1042548	1048318	789624	3	214,93,134,	0,752,5715,
#Partially deleted in new
chr10	1042676	1048935	chr10:1042676-1048935	0	-	1042676	1042676	8553170	3	86,871,72,	0,624,6187,
#Partially deleted in new
chr10	1049537	1132297	chr10:1049537-1132297	3	+	1072155	1129344	789624	14	104,178,97,96,65,136,72,45,77,235,142,135,115,3085,	0,22578,28369,30473,30874,34865,36748,43914,46632,54064,55588,74680,75372,79675,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	1056403	1096626	chr10:1056403-1096626	1	+	1072155	1096270	789624	9	161,178,97,96,65,136,72,45,457,	0,15712,21503,23607,24008,27999,29882,37048,39766,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	1056403	1096625	chr10:1056403-1096625	1	+	1072155	1096315	789624	10	161,178,97,96,65,136,72,45,98,355,	0,15712,21503,23607,24008,27999,29882,37048,39766,39867,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr10	1056846	1132384	chr10:1056846-1132384	1	+	1072155	1129344	8553170	16	122,178,97,96,65,136,72,45,77,120,123,238,142,135,115,3172,	0,15269,21060,23164,23565,27556,29439,36605,39323,45611,46009,46752,48279,67371,68063,72366,
#Partially deleted in new
chr10	1056857	1132170	chr10:1056857-1132170	1	+	1072155	1129344	789624	14	111,178,97,96,65,136,72,45,77,235,142,135,115,2958,	0,15258,21049,23153,23554,27545,29428,36594,39312,46744,48268,67360,68052,72355,
#Partially deleted in new
chr10	1074382	1096246	chr10:1074382-1096246	0	+	1074469	1096246	789624	8	126,97,96,65,136,72,45,77,	0,3524,5628,6029,10020,11903,19069,21787,
#Partially deleted in new
chr10	1123806	1129252	chr10:1123806-1129252	0	+	1123806	1123806	8553170	4	296,135,115,40,	0,411,1103,5406,
#Partially deleted in new
chr10	1159767	1164672	chr10:1159767-1164672	1	+	1159767	1159767	5263520	3	223,85,2126,	0,785,2779,
#Deleted in new
chr10	1159803	1160997	chr10:1159803-1160997	0	+	1159803	1159803	8553170	2	187,445,	0,749,
#Partially deleted in new
chr10	1159811	1164789	chr10:1159811-1164789	3	+	1159811	1159811	8553170	4	179,85,525,1575,	0,741,2735,3403,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	1177317	1737476	chr10:1177317-1737476	3	-	1183192	1737150	789624	10	6052,179,182,169,152,169,115,890,87,426,	0,7543,22648,39633,56376,64813,93637,185710,201756,559733,
#Partially deleted in new
chr10	1182133	1200360	chr10:1182133-1200360	1	-	1183192	1200356	789624	3	1236,179,395,	0,2727,17832,
#Deleted in new
chr10	1182844	1186566	chr10:1182844-1186566	0	-	1182844	1182844	8553170	3	525,179,64,	0,2016,3658,
#Deleted in new
chr10	1183042	1188246	chr10:1183042-1188246	0	-	1183042	1183042	8553170	3	327,179,93,	0,1818,5111,
#Partially deleted in new
chr10	1183150	1200385	chr10:1183150-1200385	1	-	1183192	1200035	789624	4	219,179,182,123,	0,1710,16815,17112,
#Deleted in new
chr10	1199445	1200371	chr10:1199445-1200371	0	-	1199445	1199445	8553170	2	277,406,	0,520,
#Partially deleted in new
chr10	1215675	1240530	chr10:1215675-1240530	0	-	1215675	1215675	8553170	3	1444,152,145,	0,18018,24710,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	1290017	1293002	chr10:1290017-1293002	3	-	1290017	1290017	8553170	1	2985,	0,
#Deleted in new
chr10	1361000	1361637	chr10:1361000-1361637	3	-	1361000	1361000	8553170	2	141,218,	0,419,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	1526636	1556984	chr10:1526636-1556984	0	+	1526636	1526636	789624	2	263,374,	0,29974,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	1526762	1535673	chr10:1526762-1535673	3	+	1526762	1526762	8553170	3	137,406,82,	0,7827,8829,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	2005472	2014348	chr10:2005472-2014348	3	-	2005472	2005472	789624	3	1671,212,214,	0,7774,8662,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	2012264	2014348	chr10:2012264-2014348	1	-	2012264	2012264	8553170	3	304,259,214,	0,982,1870,
#Deleted in new
chr10	2012652	2013411	chr10:2012652-2013411	0	-	2012652	2012652	8553170	2	319,165,	0,594,
#Partially deleted in new
chr10	2071844	2081097	chr10:2071844-2081097	3	+	2071844	2071844	8553170	2	131,301,	0,8952,
#Deleted in new
chr10	2076018	2076089	chr10:2076018-2076089	3	-	2076018	2076018	5263520	1	71,	0,
#Deleted in new
chr10	2098166	2098269	chr10:2098166-2098269	3	+	2098166	2098166	8553170	1	103,	0,
#Partially deleted in new
chr10	2166331	2169460	chr10:2166331-2169460	3	+	2166331	2166331	8553170	2	74,2247,	0,882,
#Partially deleted in new
chr10	2169146	2176432	chr10:2169146-2176432	0	-	2169146	2169146	8553170	2	106,90,	0,7196,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	2199386	2199488	chr10:2199386-2199488	3	+	2199386	2199386	8553170	1	102,	0,
#Partially deleted in new
chr10	2305082	2315075	chr10:2305082-2315075	3	-	2305082	2305082	789624	3	654,42,46,	0,1185,9947,
#Deleted in new
chr10	2446252	2447352	chr10:2446252-2447352	0	-	2446252	2446252	8553170	2	698,58,	0,1042,
#Deleted in new
chr10	2446252	2447352	chr10:2446252-2447352	3	-	2446252	2446252	8553170	2	698,66,	0,1034,
#Deleted in new
chr10	2446257	2447352	chr10:2446257-2447352	0	-	2446257	2446257	8553170	2	656,58,	0,1037,
#Deleted in new
chr10	2499720	2500570	chr10:2499720-2500570	3	+	2499720	2499720	8553170	2	88,244,	0,606,
#Partially deleted in new
chr10	2501782	2567239	chr10:2501782-2567239	3	+	2501782	2501782	8553170	2	207,711,	0,64746,
#Partially deleted in new
chr10	2501802	2537625	chr10:2501802-2537625	0	+	2501802	2501802	8553170	2	187,133,	0,35690,
#Deleted in new
chr10	2936020	2936441	chr10:2936020-2936441	7	+	2936020	2936020	16724991	1	421,	0,
#Deleted in new
chr10	3065423	3066001	chr10:3065423-3066001	3	-	3065423	3065423	8553170	1	578,	0,
#Partially deleted in new
chr10	3066332	3101554	chr10:3066332-3101554	0	+	3082389	3101554	789624	4	90,74,78,190,	0,16055,32942,35032,
#Partially deleted in new
chr10	3067519	3136802	chr10:3067519-3136802	3	+	3067595	3136579	0	22	188,74,78,190,166,45,109,96,93,126,65,70,147,71,88,153,165,62,112,100,103,353,	0,14868,31755,33845,36259,37595,37873,39694,41181,41835,44702,45599,45852,49256,51262,52372,62299,64860,65683,66963,68216,68930,
#Deleted in new
chr10	3067671	3069380	chr10:3067671-3069380	0	+	3067671	3067671	8553170	2	36,107,	0,1602,
#Partially deleted in new
chr10	3068626	3136793	chr10:3068626-3136793	1	+	3069381	3136579	0	24	116,116,74,78,80,190,166,45,109,96,93,126,65,70,147,71,88,153,165,62,112,100,103,344,	0,647,13761,30648,32294,32738,35152,36488,36766,38587,40074,40728,43595,44492,44745,48149,50155,51265,61192,63753,64576,65856,67109,67823,
#Partially deleted in new
chr10	3069232	3103937	chr10:3069232-3103937	0	+	3069232	3069232	8553170	5	157,74,78,190,159,	0,13155,30042,32132,34546,
#Partially deleted in new
chr10	3070244	3105473	chr10:3070244-3105473	0	+	3082389	3105473	789624	7	71,74,78,190,166,45,81,	0,12143,29030,31120,33534,34870,35148,
#Partially deleted in new
chr10	3104723	3113516	chr10:3104723-3113516	0	+	3105142	3113516	789624	8	436,109,96,93,126,65,70,145,	0,669,2490,3977,4631,7498,8395,8648,
#Deleted in new
chr10	3104746	3109394	chr10:3104746-3109394	0	+	3105142	3109394	789624	6	42,45,109,96,93,40,	0,368,646,2467,3954,4608,
#Deleted in new
chr10	3104878	3107233	chr10:3104878-3107233	0	+	3104878	3104878	8553170	3	423,109,20,	0,514,2335,
#Partially deleted in new
chr10	3113457	3129941	chr10:3113457-3129941	0	+	3113457	3129941	789624	5	61,71,88,153,123,	0,3318,5324,11639,16361,
#Partially deleted in new
chr10	3129006	3136793	chr10:3129006-3136793	1	+	3129881	3136579	789624	6	977,62,112,100,103,344,	0,3373,4196,5476,6729,7443,
#Partially deleted in new
chr10	3133234	3137712	chr10:3133234-3137712	0	+	3133234	3137570	789624	4	80,100,103,170,	0,1248,2501,4308,
#Partially deleted in new
chr10	3134565	3145166	chr10:3134565-3145166	3	+	3134565	3134565	8553170	4	17,103,131,196,	0,1170,9290,10405,
#Partially deleted in new
chr10	3137727	3149399	chr10:3137727-3149399	0	-	3137727	3137727	8553170	9	397,103,146,126,343,75,121,101,1828,	0,507,1176,2959,5661,6564,7868,9422,9844,
#Deleted in new
chr10	3137727	3138615	chr10:3137727-3138615	0	-	3137727	3137727	8553170	2	397,381,	0,507,
#Partially deleted in new
chr10	3137729	3172807	chr10:3137729-3172807	1	-	3138030	3172772	0	27	395,103,146,126,113,75,121,101,166,77,121,133,117,139,135,97,114,129,89,127,161,97,115,152,107,103,91,	0,505,1174,2957,5659,6562,7866,9420,9842,10257,10441,11891,13517,17861,19200,19705,20310,21184,22118,22474,25995,27508,27683,28499,29206,32374,34987,
#Partially deleted in new
chr10	3137729	3172841	chr10:3137729-3172841	3	-	3138030	3172772	0	27	395,103,146,126,113,75,121,101,166,77,124,133,117,139,135,97,114,129,89,127,161,97,115,152,107,103,125,	0,505,1174,2957,5659,6562,7866,9420,9842,10257,10438,11891,13517,17861,19200,19705,20310,21184,22118,22474,25995,27508,27683,28499,29206,32374,34987,
#Partially deleted in new
chr10	3137729	3172841	chr10:3137729-3172841	1	-	3138030	3172779	0	24	395,103,146,126,113,75,121,101,166,133,117,139,135,97,114,129,89,127,161,97,115,152,107,125,	0,505,1174,2957,5659,6562,7866,9420,9842,11891,13517,17861,19200,19705,20310,21184,22118,22474,25995,27508,27683,28499,29206,34987,
#Partially deleted in new
chr10	3137733	3158087	chr10:3137733-3158087	1	-	3138030	3157085	789624	16	391,103,146,126,113,75,121,101,166,77,121,133,117,139,602,48,	0,501,1170,2953,5655,6558,7862,9416,9838,10253,10437,11887,13513,17857,19196,20306,
#Partially deleted in new
chr10	3138690	3144366	chr10:3138690-3144366	0	-	3138808	3144366	789624	4	359,126,113,75,	0,1996,4698,5601,
#Partially deleted in new
chr10	3141507	3148055	chr10:3141507-3148055	0	-	3141604	3148055	789624	7	230,113,75,121,101,166,69,	0,1881,2784,4088,5642,6064,6479,
#Partially deleted in new
chr10	3141631	3167972	chr10:3141631-3167972	0	+	3141631	3141631	8553170	4	138,131,191,141,	0,2224,22463,26200,
#Partially deleted in new
chr10	3141631	3164249	chr10:3141631-3164249	0	+	3141631	3141631	8553170	4	138,117,131,155,	0,1340,2224,22463,
#Partially deleted in new
chr10	3141671	3148622	chr10:3141671-3148622	3	+	3141671	3141671	789624	4	98,117,131,3652,	0,1300,2184,3299,
#Partially deleted in new
chr10	3143482	3145709	chr10:3143482-3145709	0	-	3143703	3145709	789624	3	293,75,114,	0,809,2113,
#Partially deleted in new
chr10	3151175	3158958	chr10:3151175-3158958	0	-	3151193	3158958	789624	6	188,139,135,97,114,45,	0,4415,5754,6259,6864,7738,
#Partially deleted in new
chr10	3163131	3165334	chr10:3163131-3165334	0	-	3163131	3163131	8553170	2	754,97,	0,2106,
#Partially deleted in new
chr10	3223815	3227407	chr10:3223815-3227407	3	+	3223815	3223815	8553170	3	35,141,421,	0,1772,3171,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	3266002	3267015	chr10:3266002-3267015	3	+	3266002	3266002	8553170	2	105,358,	0,655,
#Partially deleted in new
chr10	3486893	3502838	chr10:3486893-3502838	3	-	3486893	3486893	8553170	5	117,84,72,51,508,	0,9259,10759,12290,15437,
#Deleted in new
chr10	3532093	3537031	chr10:3532093-3537031	3	-	3532093	3532093	8553170	2	177,253,	0,4685,
#Deleted in new
chr10	3535111	3536857	chr10:3535111-3536857	1	-	3535111	3535111	8553170	2	293,79,	0,1667,
#Deleted in new
chr10	3767914	3768751	chr10:3767914-3768751	3	+	3767914	3767914	8553170	2	133,180,	0,657,
#Deleted in new
chr10	3775995	3780217	chr10:3775995-3780217	0	-	3775995	3775995	8553170	3	408,244,112,	0,3351,4110,
#Deleted in new
chr10	3775995	3785275	chr10:3775995-3785275	3	-	3779538	3785014	789624	4	3595,124,574,363,	0,4110,5645,8917,
#Deleted in new
chr10	3775996	3785281	chr10:3775996-3785281	1	-	3779552	3785014	789624	3	3594,574,369,	0,5644,8916,
#Deleted in new
chr10	3779046	3782051	chr10:3779046-3782051	0	-	3779046	3779046	8553170	3	544,124,257,	0,1059,2748,
#Deleted in new
chr10	3779549	3780496	chr10:3779549-3780496	0	-	3779549	3779549	8553170	2	41,391,	0,556,
#Deleted in new
chr10	3780326	3785193	chr10:3780326-3785193	1	-	3781470	3785014	789624	2	1888,281,	0,4586,
#Deleted in new
chr10	3781807	3785183	chr10:3781807-3785183	0	-	3781807	3781807	8553170	3	407,66,271,	0,1408,3105,
#Deleted in new
chr10	3833949	3834728	chr10:3833949-3834728	3	+	3833949	3833949	789624	2	288,248,	0,531,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	3912026	3935808	chr10:3912026-3935808	3	+	3912026	3912026	8553170	4	150,317,108,130,	0,20629,22493,23652,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	3934518	3935813	chr10:3934518-3935813	1	+	3934518	3934518	8553170	2	456,135,	0,1160,
#Deleted in new
chr10	3991159	3991259	chr10:3991159-3991259	3	+	3991159	3991159	5263520	1	100,	0,
#Partially deleted in new
chr10	4024939	4028394	chr10:4024939-4028394	3	+	4024939	4024939	8553170	2	417,216,	0,3239,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	4051725	4089013	chr10:4051725-4089013	3	+	4051725	4051725	789624	4	432,97,103,1655,	0,33471,33880,35633,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	4201140	4243912	chr10:4201140-4243912	3	-	4201140	4201140	789624	3	6026,184,90,	0,42363,42682,
#Partially deleted in new
chr10	4235559	4243643	chr10:4235559-4243643	0	-	4235559	4235559	8553170	2	223,140,	0,7944,
#Deleted in new
chr10	4242949	4243789	chr10:4242949-4243789	0	-	4242949	4242949	8553170	2	160,286,	0,554,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	4384245	4410612	chr10:4384245-4410612	3	+	4384245	4384245	789624	2	232,2158,	0,24209,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	4406501	4409251	chr10:4406501-4409251	0	+	4406501	4406501	8553170	2	72,797,	0,1953,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	4415304	4426179	chr10:4415304-4426179	3	-	4415304	4415304	8553170	4	231,209,142,109,	0,964,8245,10766,
#Partially deleted in new
chr10	4651102	4656800	chr10:4651102-4656800	1	-	4651102	4651102	8553170	3	101,219,98,	0,4931,5600,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	4655426	4662419	chr10:4655426-4662419	3	+	4655426	4655426	789624	3	894,130,721,	0,4555,6272,
#Partially deleted in new
chr10	4786628	4837583	chr10:4786628-4837583	0	+	4824987	4837583	789624	6	132,77,168,117,135,125,	0,38333,44046,46721,49046,50830,
#Partially deleted in new
chr10	4786708	4839819	chr10:4786708-4839819	0	+	4786708	4786708	8553170	6	52,168,117,135,123,91,	0,43966,46641,48966,50750,53020,
#Partially deleted in new
chr10	4826176	4848062	chr10:4826176-4848062	0	+	4833454	4847234	789624	10	101,168,117,135,123,98,73,84,152,575,	0,4498,7173,9498,11282,13552,15608,16244,20971,21311,
#Partially deleted in new
chr10	4826233	4848062	chr10:4826233-4848062	0	+	4826324	4847234	789624	10	130,168,117,135,123,98,73,84,152,575,	0,4441,7116,9441,11225,13495,15551,16187,20914,21254,
#Partially deleted in new
chr10	4826253	4848062	chr10:4826253-4848062	3	+	4826324	4847530	789624	10	110,168,117,135,123,98,73,84,83,575,	0,4421,7096,9421,11205,13475,15531,16167,20894,21234,
#Partially deleted in new
chr10	4826254	4846199	chr10:4826254-4846199	0	+	4826254	4826254	8553170	6	109,168,135,123,84,422,	0,4420,9420,11204,16166,19523,
#Partially deleted in new
chr10	4826285	4837566	chr10:4826285-4837566	0	+	4826285	4826285	8553170	3	78,117,124,	0,7064,11157,
#Partially deleted in new
chr10	4826295	4847745	chr10:4826295-4847745	1	+	4826324	4847530	789624	8	68,168,117,135,123,84,83,258,	0,4379,7054,9379,11163,16125,20852,21192,
#Partially deleted in new
chr10	4826295	4847745	chr10:4826295-4847745	1	+	4826324	4847530	789624	7	68,168,117,135,84,83,258,	0,4379,7054,9379,16125,20852,21192,
#Partially deleted in new
chr10	4826295	4847296	chr10:4826295-4847296	1	+	4826324	4847234	789624	7	68,168,117,135,123,84,149,	0,4379,7054,9379,11163,16125,20852,
#Partially deleted in new
chr10	4833354	4845811	chr10:4833354-4845811	0	+	4833354	4833354	8553170	5	112,135,123,84,34,	0,2320,4104,9066,12423,
#Partially deleted in new
chr10	4833399	4841857	chr10:4833399-4841857	0	+	4833399	4835709	789624	5	77,135,123,98,73,	0,2275,4059,6329,8385,
#Partially deleted in new
chr10	4839783	4847345	chr10:4839783-4847345	0	+	4839783	4842491	789624	4	43,56,84,198,	0,2001,2637,7364,
#Partially deleted in new
chr10	4871900	4891975	chr10:4871900-4891975	7	-	4871900	4871900	16724991	9	38,87,166,110,127,77,117,168,93,	0,4066,4736,5554,13493,15437,16184,17936,19982,
#Deleted in new
chr10	4962435	4962568	chr10:4962435-4962568	3	-	4962435	4962435	8553170	1	133,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	4963252	4983283	chr10:4963252-4983283	3	+	4963444	4977742	0	9	276,168,117,78,123,110,166,83,5584,	0,2661,3674,5056,5569,8948,9331,12598,14447,
#Partially deleted in new
chr10	4963252	4977950	chr10:4963252-4977950	0	+	4963252	4963252	8553170	8	276,168,1460,123,110,166,83,251,	0,2661,3674,5569,8948,9331,12598,14447,
#Partially deleted in new
chr10	4963448	4972747	chr10:4963448-4972747	0	+	4963448	4972747	789624	7	80,72,117,78,123,110,164,	0,2561,3478,4860,5373,8752,9135,
#Partially deleted in new
chr10	4963788	4969941	chr10:4963788-4969941	1	+	4963803	4969716	789624	6	105,168,117,78,123,267,	0,2125,3138,4520,5033,5886,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	4965490	4967048	chr10:4965490-4967048	0	+	4965490	4965490	8553170	2	591,122,	0,1436,
#Partially deleted in new
chr10	4987399	5004023	chr10:4987399-5004023	3	-	4989995	5003835	0	9	2639,83,166,110,123,78,117,168,272,	0,4431,7919,8356,11225,11800,13150,14114,16352,
#Partially deleted in new
chr10	4989433	5003860	chr10:4989433-5003860	1	-	4989995	5003835	789624	8	605,83,166,110,123,117,168,109,	0,2397,5885,6322,9191,11116,12080,14318,
#Partially deleted in new
chr10	4989788	5004023	chr10:4989788-5004023	0	-	4989788	4989788	8553170	8	250,83,166,110,123,1467,168,272,	0,2042,5530,5967,8836,9411,11725,13963,
#Deleted in new
chr10	4995487	4997374	chr10:4995487-4997374	3	+	4995487	4995487	8553170	3	180,110,135,	0,549,1752,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	4995833	5017955	chr10:4995833-5017955	0	-	4995833	5003835	789624	7	32,123,78,117,168,171,56,	0,2791,3366,4716,5680,7918,22066,
#Deleted in new
chr10	4995881	4997380	chr10:4995881-4997380	0	+	4995881	4995881	8553170	3	51,110,141,	0,155,1358,
#Partially deleted in new
chr10	4999910	5004014	chr10:4999910-5004014	1	-	5000409	5003835	0	4	550,117,168,263,	0,639,1603,3841,
#Partially deleted in new
chr10	5000302	5003861	chr10:5000302-5003861	0	-	5000302	5000302	8553170	4	158,117,168,110,	0,247,1211,3449,
#Deleted in new
chr10	5004709	5004842	chr10:5004709-5004842	3	+	5004709	5004709	8553170	1	133,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	5005994	5018031	chr10:5005994-5018031	0	-	5005994	5005994	8553170	4	58,100,310,132,	0,1412,4349,11905,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	5006461	5017934	chr10:5006461-5017934	0	-	5006461	5006461	8553170	4	131,100,310,35,	0,945,3882,11438,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	5013306	5015048	chr10:5013306-5015048	0	-	5013306	5013306	8553170	2	314,146,	0,1596,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	5035353	5102210	chr10:5035353-5102210	0	+	5035353	5035353	8553170	6	263,168,117,78,123,110,	0,61056,62080,63448,63973,66747,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	5035356	5097533	chr10:5035356-5097533	0	+	5035356	5035356	8553170	6	260,108,156,204,168,100,	0,42513,45389,46325,61053,62077,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	5035357	5097537	chr10:5035357-5097537	0	+	5035357	5035357	8553170	5	259,108,156,168,104,	0,42512,45388,61052,62076,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	5048788	5099414	chr10:5048788-5099414	0	+	5077962	5099414	789624	6	107,78,168,117,78,88,	0,29111,47621,48645,50013,50538,
#Partially deleted in new
chr10	5048811	5107503	chr10:5048811-5107503	1	+	5048811	5107503	789624	9	84,168,117,78,123,110,166,83,43,	0,47598,48622,49990,50515,53289,53673,56783,58649,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	5077637	5107680	chr10:5077637-5107680	1	+	5077962	5107503	789624	9	340,168,117,78,123,110,166,83,220,	0,18772,19796,21164,21689,24463,24847,27957,29823,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	5093407	5093543	chr10:5093407-5093543	3	-	5093407	5093407	8553170	1	136,	0,
#Partially deleted in new
chr10	5093792	5107686	chr10:5093792-5107686	3	+	5094444	5107503	0	9	736,168,117,78,123,110,166,83,226,	0,2617,3641,5009,5534,8308,8692,11802,13668,
#Deleted in new
chr10	5094413	5098176	chr10:5094413-5098176	0	+	5094413	5094413	8553170	3	115,168,743,	0,1996,3020,
#Deleted in new
chr10	5094417	5099893	chr10:5094417-5099893	0	+	5094417	5094417	8553170	3	111,168,567,	0,1992,4909,
#Deleted in new
chr10	5096144	5097528	chr10:5096144-5097528	0	+	5096144	5096144	8553170	2	433,95,	0,1289,
#Partially deleted in new
chr10	5105274	5107686	chr10:5105274-5107686	0	+	5105274	5105274	8553170	2	403,226,	0,2186,
#Partially deleted in new
chr10	5122086	5135226	chr10:5122086-5135226	7	-	5122086	5122086	16724991	5	81,166,110,168,84,	0,1187,1624,10515,13056,
#Partially deleted in new
chr10	5154139	5185104	chr10:5154139-5185104	3	-	5154139	5185104	8553170	9	43,83,166,110,123,78,117,168,93,	0,1535,3495,4460,5743,6672,7716,8713,30872,
#Partially deleted in new
chr10	5154142	5185104	chr10:5154142-5185104	0	-	5161755	5185104	789624	10	40,83,166,110,123,78,56,117,168,93,	0,1532,3492,4457,5740,6669,7569,7713,8710,30869,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	5154459	5185187	chr10:5154459-5185187	0	-	5154459	5154459	789624	8	1298,166,123,78,56,117,168,176,	0,3175,5423,6352,7252,7396,8393,30552,
#Partially deleted in new
chr10	5161730	5185181	chr10:5161730-5185181	1	-	5161755	5185104	789624	4	37,117,168,170,	0,125,1122,23281,
#Partially deleted in new
chr10	5195461	5196922	chr10:5195461-5196922	0	+	5195461	5195461	8553170	2	114,694,	0,767,
#Partially deleted in new
chr10	5195462	5218949	chr10:5195462-5218949	3	+	5196867	5218760	0	11	113,92,132,168,117,78,123,110,166,83,232,	0,766,1357,4718,8914,10294,10812,17153,17531,21248,23255,
#Partially deleted in new
chr10	5196834	5218947	chr10:5196834-5218947	1	+	5196867	5218760	0	9	117,168,117,78,123,110,166,83,230,	0,3346,7542,8922,9440,15781,16159,19876,21883,
#Deleted in new
chr10	5207168	5207742	chr10:5207168-5207742	7	+	5207168	5207168	16724991	1	574,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	5234357	5263408	chr10:5234357-5263408	3	+	5234357	5234357	8553170	2	236,444,	0,28607,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	5266032	5271236	chr10:5266032-5271236	3	-	5266032	5266032	789624	2	653,39,	0,5165,
#Partially deleted in new
chr10	5275172	5288470	chr10:5275172-5288470	7	-	5275172	5275172	16724991	8	65,167,114,123,78,117,168,63,	0,1955,2905,7603,8537,9642,10672,13235,
#Partially deleted in new
chr10	5275205	5285925	chr10:5275205-5285925	4	-	5275205	5275205	16724991	6	32,167,123,78,117,81,	0,1922,7570,8504,9609,10639,
#Deleted in new
chr10	5304430	5304865	chr10:5304430-5304865	7	-	5304430	5304430	16724991	1	435,	0,
#Deleted in new
chr10	5346650	5347277	chr10:5346650-5347277	3	+	5346650	5346650	8553170	1	627,	0,
#Partially deleted in new
chr10	5365008	5374692	chr10:5365008-5374692	3	+	5373720	5374206	0	2	222,978,	0,8706,
#Partially deleted in new
chr10	5393097	5404830	chr10:5393097-5404830	3	-	5393516	5404792	789624	4	1364,149,244,41,	0,2229,7746,11692,
#Partially deleted in new
chr10	5393268	5404828	chr10:5393268-5404828	1	-	5393516	5404792	789624	4	1193,149,124,39,	0,2058,7575,11521,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	5412550	5458463	chr10:5412550-5458463	1	+	5412692	5456994	0	12	270,67,60,108,168,63,97,77,258,171,187,1876,	0,14104,16619,39279,39807,40307,40699,40933,41714,42397,43536,44037,
#Partially deleted in new
chr10	5446608	5454522	chr10:5446608-5454522	0	+	5446765	5454522	789624	4	250,52,77,258,	0,6686,6875,7656,
#Partially deleted in new
chr10	5446608	5452897	chr10:5446608-5452897	0	+	5446608	5446608	8553170	4	250,108,168,73,	0,5221,5749,6216,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	5446610	5458463	chr10:5446610-5458463	3	+	5446765	5456994	0	10	248,108,168,63,97,77,258,171,187,1876,	0,5219,5747,6247,6639,6873,7654,8337,9476,9977,
#Deleted in new
chr10	5452418	5453153	chr10:5452418-5453153	0	+	5452418	5452418	8553170	2	107,296,	0,439,
#Deleted in new
chr10	5454380	5456530	chr10:5454380-5456530	0	+	5454380	5454380	8553170	3	142,171,444,	0,567,1706,
#Deleted in new
chr10	5498696	5499555	chr10:5498696-5499555	3	-	5498997	5499438	0	1	859,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	5514243	5523177	chr10:5514243-5523177	3	-	5514243	5514243	8553170	2	3269,1262,	0,7672,
#Partially deleted in new
chr10	5517280	5526246	chr10:5517280-5526246	0	-	5517280	5517280	789624	3	232,214,114,	0,4635,8852,
#Partially deleted in new
chr10	5517368	5526241	chr10:5517368-5526241	1	-	5517368	5517368	789624	4	144,214,112,109,	0,4547,6940,8764,
#Deleted in new
chr10	5524008	5526771	chr10:5524008-5526771	3	+	5525085	5525535	0	1	2763,	0,
#Deleted in new
chr10	5524975	5525742	chr10:5524975-5525742	3	-	5524975	5524975	8553170	2	523,72,	0,695,
#Deleted in new
chr10	5594990	5596118	chr10:5594990-5596118	3	-	5594990	5594990	789624	2	589,108,	0,1020,
#Deleted in new
chr10	5608474	5610793	chr10:5608474-5610793	3	-	5608474	5608474	8553170	5	257,111,60,123,62,	0,1212,1633,1839,2257,
#Deleted in new
chr10	5616861	5618161	chr10:5616861-5618161	3	-	5616861	5616861	8553170	3	326,100,231,	0,439,1069,
#Deleted in new
chr10	5624930	5625126	chr10:5624930-5625126	7	+	5624930	5624930	16724991	1	196,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	5631462	5631755	chr10:5631462-5631755	3	+	5631462	5631462	8553170	1	293,	0,
#Partially deleted in new
chr10	5638866	5641812	chr10:5638866-5641812	0	-	5638866	5638866	8553170	3	505,135,43,	0,1829,2903,
#Partially deleted in new
chr10	5638867	5666578	chr10:5638867-5666578	3	-	5640702	5666551	789624	6	1963,192,135,151,188,70,	0,2902,10102,12345,13995,27641,
#Partially deleted in new
chr10	5638867	5666578	chr10:5638867-5666578	0	-	5642548	5666551	789624	7	1963,192,81,135,151,188,70,	0,2902,3605,10102,12345,13995,27641,
#Partially deleted in new
chr10	5638867	5666595	chr10:5638867-5666595	0	-	5638867	5638867	789624	5	1963,192,135,188,87,	0,2902,10102,13995,27641,
#Partially deleted in new
chr10	5648971	5651568	chr10:5648971-5651568	0	-	5648971	5648971	8553170	2	133,356,	0,2241,
#Partially deleted in new
chr10	5684837	5763740	chr10:5684837-5763740	1	+	5720642	5763032	789624	21	338,96,92,125,20,100,101,104,73,63,717,243,880,430,3849,126,154,106,182,115,712,	0,27985,32821,35706,35917,36033,38839,39592,42047,42223,45649,50466,54780,57259,61341,71775,72682,74049,76452,77694,78191,
#Partially deleted in new
chr10	5684941	5714176	chr10:5684941-5714176	0	+	5684941	5684941	8553170	4	234,134,96,42,	0,24588,27881,29193,
#Partially deleted in new
chr10	5684941	5712539	chr10:5684941-5712539	0	+	5684941	5684941	8553170	3	234,134,146,	0,24588,27452,
#Partially deleted in new
chr10	5684947	5720668	chr10:5684947-5720668	0	+	5720642	5720668	789624	4	228,96,73,125,	0,27875,29187,35596,
#Partially deleted in new
chr10	5684964	5720611	chr10:5684964-5720611	0	+	5684964	5684964	8553170	5	211,96,73,92,68,	0,27858,29170,32694,35579,
#Partially deleted in new
chr10	5692815	5763728	chr10:5692815-5763728	3	+	5692913	5763032	789624	24	103,134,146,96,73,92,125,20,100,101,104,73,63,717,243,880,430,3849,126,154,106,182,115,700,	0,16714,19578,20007,21319,24843,27728,27939,28055,30861,31614,34069,34245,37671,42488,46802,49281,53363,63797,64704,66071,68474,69716,70213,
#Partially deleted in new
chr10	5699447	5709663	chr10:5699447-5709663	0	+	5699657	5709663	789624	2	290,134,	0,10082,
#Partially deleted in new
chr10	5699492	5714207	chr10:5699492-5714207	0	+	5699700	5714207	789624	4	245,146,96,73,	0,12901,13330,14642,
#Partially deleted in new
chr10	5709625	5714574	chr10:5709625-5714574	0	+	5709625	5709625	8553170	3	38,96,440,	0,3197,4509,
#Partially deleted in new
chr10	5712173	5744067	chr10:5712173-5744067	3	-	5712173	5712173	8553170	2	515,221,	0,31673,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	5712419	5714423	chr10:5712419-5714423	0	-	5712419	5712419	8553170	2	269,676,	0,1328,
#Partially deleted in new
chr10	5726825	5730776	chr10:5726825-5730776	0	+	5726825	5726825	8553170	3	132,63,290,	0,235,3661,
#Partially deleted in new
chr10	5730661	5739813	chr10:5730661-5739813	0	+	5730661	5739813	789624	2	542,196,	0,8956,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	5758928	5761801	chr10:5758928-5761801	0	+	5758928	5758928	8553170	2	64,512,	0,2361,
#Partially deleted in new
chr10	5760839	5763740	chr10:5760839-5763740	0	+	5760839	5760839	8553170	2	632,1209,	0,1692,
#Partially deleted in new
chr10	5765222	5813549	chr10:5765222-5813549	3	-	5766005	5813258	789624	11	930,55,145,172,100,132,199,135,100,108,336,	0,1018,1271,2990,8619,19919,20629,29662,31540,35375,47991,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	5765228	5769389	chr10:5765228-5769389	0	-	5765228	5765228	8553170	3	924,398,1177,	0,1012,2984,
#Partially deleted in new
chr10	5765848	5785922	chr10:5765848-5785922	0	-	5766070	5785922	789624	6	304,55,172,100,132,71,	0,392,2364,7993,19293,20003,
#Partially deleted in new
chr10	5765953	5813411	chr10:5765953-5813411	1	-	5766005	5813258	789624	10	199,55,145,172,100,132,199,100,108,198,	0,287,540,2259,7888,19188,19898,30809,34644,47260,
#Partially deleted in new
chr10	5773841	5813387	chr10:5773841-5813387	0	-	5773841	5813258	789624	7	100,132,199,105,100,108,174,	0,11300,12010,21043,22921,26756,39372,
#Partially deleted in new
chr10	5776070	5776858	chr10:5776070-5776858	7	+	5776070	5776070	16724991	1	788,	0,
#Partially deleted in new
chr10	5785865	5813429	chr10:5785865-5813429	0	-	5785865	5813258	789624	4	185,135,100,216,	0,9019,10897,27348,
#Partially deleted in new
chr10	5785981	5814329	chr10:5785981-5814329	0	-	5785981	5800684	789624	5	69,135,100,108,222,	0,8903,10781,14616,28126,
#Partially deleted in new
chr10	5794907	5813432	chr10:5794907-5813432	0	-	5794907	5811930	789624	5	112,100,108,83,219,	0,1855,5690,16966,18306,
#Partially deleted in new
chr10	5813984	5814441	chr10:5813984-5814441	3	+	5813984	5813984	8553170	2	61,215,	0,242,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	5861616	5889898	chr10:5861616-5889898	3	-	5878129	5889354	789624	8	1075,191,79,162,109,43,221,858,	0,16480,18681,21389,22352,24106,26230,27424,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	5861804	5862594	chr10:5861804-5862594	7	-	5861804	5861804	16724991	2	92,397,	0,393,
#Partially deleted in new
chr10	5878086	5889871	chr10:5878086-5889871	1	-	5878129	5889354	789624	7	201,79,162,109,43,221,831,	0,2211,4919,5882,7636,9760,10954,
#Partially deleted in new
chr10	5878121	5889906	chr10:5878121-5889906	1	-	5878221	5889354	789624	6	166,162,109,43,221,866,	0,4884,5847,7601,9725,10919,
#Partially deleted in new
chr10	5882702	5887970	chr10:5882702-5887970	0	-	5882702	5882702	8553170	4	465,109,43,124,	0,1266,3020,5144,
#Partially deleted in new
chr10	5890230	5937593	chr10:5890230-5937593	1	+	5890345	5937280	789624	21	116,156,596,131,136,191,93,92,169,223,88,87,137,100,122,76,198,126,107,132,484,	0,12789,15806,18694,18928,20707,23516,23947,25172,26003,27189,27359,28111,31027,31217,33390,34080,35136,37204,46225,46879,
#Partially deleted in new
chr10	5890247	5910954	chr10:5890247-5910954	0	+	5890247	5890247	8553170	5	99,596,131,136,17,	0,15789,18677,18911,20690,
#Partially deleted in new
chr10	5890279	5906621	chr10:5890279-5906621	0	+	5890279	5890279	8553170	4	67,98,156,585,	0,739,12740,15757,
#Partially deleted in new
chr10	5894385	5937593	chr10:5894385-5937593	3	+	5894489	5937280	789624	22	126,132,156,596,131,136,191,93,92,169,223,88,87,137,100,122,76,198,126,107,132,484,	0,670,8634,11651,14539,14773,16552,19361,19792,21017,21848,23034,23204,23956,26872,27062,29235,29925,30981,33049,42070,42724,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	5903165	5909237	chr10:5903165-5909237	0	+	5903165	5903165	8553170	5	10,70,596,131,79,	0,2052,2871,5759,5993,
#Partially deleted in new
chr10	5906505	5909478	chr10:5906505-5909478	0	+	5906505	5906505	8553170	3	127,131,320,	0,2419,2653,
#Deleted in new
chr10	5914177	5915944	chr10:5914177-5915944	0	+	5914177	5914177	8553170	2	92,542,	0,1225,
#Deleted in new
chr10	5917061	5917621	chr10:5917061-5917621	0	+	5917061	5917061	8553170	2	446,32,	0,528,
#Partially deleted in new
chr10	5921345	5924398	chr10:5921345-5924398	0	+	5921345	5921345	8553170	3	12,122,778,	0,102,2275,
#Partially deleted in new
chr10	5923570	5927518	chr10:5923570-5927518	0	+	5923570	5923570	8553170	4	126,198,126,84,	0,740,1796,3864,
#Partially deleted in new
chr10	5925263	5927541	chr10:5925263-5927541	0	+	5925263	5925263	8553170	2	229,107,	0,2171,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	5925410	5929866	chr10:5925410-5929866	0	+	5925410	5925410	8553170	3	82,107,492,	0,2024,3964,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	5925410	5928673	chr10:5925410-5928673	0	+	5925410	5925410	8553170	3	82,107,338,	0,2024,2925,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	5934269	5945900	chr10:5934269-5945900	3	-	5934269	5934269	8553170	2	3240,246,	0,11385,
#Deleted in new
chr10	5936632	5937511	chr10:5936632-5937511	0	+	5936632	5936632	8553170	2	98,306,	0,573,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	5943489	5945738	chr10:5943489-5945738	0	-	5943489	5943489	8553170	2	426,84,	0,2165,
#Partially deleted in new
chr10	5943503	5945749	chr10:5943503-5945749	0	-	5943503	5943503	8553170	2	286,95,	0,2151,
#Partially deleted in new
chr10	5943638	5977611	chr10:5943638-5977611	1	-	5943638	5977492	789624	8	151,76,33,201,99,195,153,207,	0,12740,16115,16728,20104,22506,25137,33766,
#Partially deleted in new
chr10	5948891	5960567	chr10:5948891-5960567	0	-	5948954	5960567	789624	4	349,76,33,201,	0,7487,10862,11475,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	5950742	5977611	chr10:5950742-5977611	1	-	5950742	5977492	789624	8	82,76,33,201,99,195,153,207,	0,5636,9011,9624,13000,15402,18033,26662,
#Partially deleted in new
chr10	5952370	5977590	chr10:5952370-5977590	3	-	5953094	5977492	0	7	836,76,33,201,99,195,186,	0,4008,7383,7996,11372,13774,25034,
#Partially deleted in new
chr10	5952371	5977611	chr10:5952371-5977611	1	-	5953094	5977597	789624	8	835,76,33,201,99,195,153,207,	0,4007,7382,7995,11371,13773,16404,25033,
#Partially deleted in new
chr10	5952371	5978187	chr10:5952371-5978187	1	-	5953094	5966319	0	7	835,76,33,201,99,195,411,	0,4007,7382,7995,11371,13773,25405,
#Partially deleted in new
chr10	5952385	5978045	chr10:5952385-5978045	0	-	5952385	5952385	8553170	7	821,76,33,201,99,195,269,	0,3993,7368,7981,11357,13759,25391,
#Partially deleted in new
chr10	5952392	5978187	chr10:5952392-5978187	0	-	5952392	5952392	8553170	6	814,76,33,102,195,411,	0,3986,7361,7974,13752,25384,
#Partially deleted in new
chr10	5952392	5978038	chr10:5952392-5978038	0	-	5952392	5952392	8553170	6	814,76,33,201,195,262,	0,3986,7361,7974,13752,25384,
#Partially deleted in new
chr10	5952792	5977522	chr10:5952792-5977522	1	-	5953094	5977492	0	6	414,76,33,201,195,118,	0,3586,6961,7574,13352,24612,
#Partially deleted in new
chr10	5952820	5963832	chr10:5952820-5963832	0	-	5953259	5963832	789624	5	506,76,33,201,90,	0,3558,6933,7546,10922,
#Partially deleted in new
chr10	5952897	5978179	chr10:5952897-5978179	0	-	5952897	5952897	789624	5	309,76,33,201,403,	0,3481,6856,7469,24879,
#Partially deleted in new
chr10	5953044	5966339	chr10:5953044-5966339	0	-	5953094	5966339	789624	6	162,76,111,33,102,195,	0,3334,5196,6709,7322,13100,
#Partially deleted in new
chr10	5953050	5977522	chr10:5953050-5977522	1	-	5953094	5977492	0	5	156,76,33,201,118,	0,3328,6703,7316,24354,
#Partially deleted in new
chr10	5953151	5977507	chr10:5953151-5977507	1	-	5953259	5977492	0	5	175,76,33,201,103,	0,3227,6602,7215,24253,
#Partially deleted in new
chr10	5953175	5977835	chr10:5953175-5977835	0	-	5953175	5966319	789624	8	31,76,33,201,195,110,153,59,	0,3203,6578,7191,12969,15418,15600,24601,
#Partially deleted in new
chr10	5953259	5977492	chr10:5953259-5977492	1	-	5953259	5977492	0	7	67,76,33,201,99,195,88,	0,3119,6494,7107,10483,12885,24145,
#Partially deleted in new
chr10	5953259	5977492	chr10:5953259-5977492	1	-	5953259	5977492	0	6	67,76,33,201,195,88,	0,3119,6494,7107,12885,24145,
#Partially deleted in new
chr10	5953805	5977611	chr10:5953805-5977611	1	-	5953805	5977492	789624	8	196,76,33,201,99,195,153,207,	0,2573,5948,6561,9937,12339,14970,23599,
#Partially deleted in new
chr10	5958202	5977611	chr10:5958202-5977611	1	-	5958202	5977492	789624	7	149,33,201,99,195,153,207,	0,1551,2164,5540,7942,10573,19202,
#Partially deleted in new
chr10	5959753	5977522	chr10:5959753-5977522	0	-	5959753	5977492	789624	4	33,201,195,118,	0,613,6391,17651,
#Partially deleted in new
chr10	5960394	5977214	chr10:5960394-5977214	0	-	5960394	5966319	789624	4	173,96,195,266,	0,3348,5750,16554,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	6010688	6062325	chr10:6010688-6062325	3	-	6012871	6062151	0	8	2208,67,72,72,216,111,192,238,	0,7364,8739,9181,10789,13555,15145,51399,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	6010714	6020339	chr10:6010714-6020339	0	-	6010714	6010714	8553170	4	2182,67,72,470,	0,7338,8713,9155,
#Partially deleted in new
chr10	6012070	6062309	chr10:6012070-6062309	1	-	6012871	6062151	789624	7	826,67,72,72,111,192,222,	0,5982,7357,7799,12173,13763,50017,
#Partially deleted in new
chr10	6012796	6062290	chr10:6012796-6062290	1	-	6012871	6062151	789624	8	100,67,72,72,189,111,192,203,	0,5256,6631,7073,8708,11447,13037,49291,
#Deleted in new
chr10	6017053	6017194	chr10:6017053-6017194	3	-	6017053	6017053	8553170	1	141,	0,
#Partially deleted in new
chr10	6019452	6026001	chr10:6019452-6026001	0	-	6019452	6026001	789624	3	47,111,168,	0,4791,6381,
#Partially deleted in new
chr10	6025977	6036427	chr10:6025977-6036427	3	+	6025977	6025977	8553170	3	91,146,243,	0,9962,10207,
#Partially deleted in new
chr10	6039399	6062370	chr10:6039399-6062370	0	-	6039399	6039399	8553170	2	343,279,	0,22692,
#Deleted in new
chr10	6071513	6071918	chr10:6071513-6071918	7	-	6071513	6071513	16724991	1	405,	0,
#Partially deleted in new
chr10	6088986	6116880	chr10:6088986-6116880	1	+	6097065	6115556	0	12	207,141,117,167,98,57,142,152,74,99,73,1428,	0,8061,12284,15944,17154,19699,20999,23223,24521,25062,26252,26466,
#Partially deleted in new
chr10	6089053	6112321	chr10:6089053-6112321	0	+	6089166	6112321	789624	7	140,117,167,98,57,142,112,	0,12217,15877,17087,19632,20932,23156,
#Partially deleted in new
chr10	6089070	6110090	chr10:6089070-6110090	0	+	6097065	6110090	789624	7	123,141,117,167,95,57,105,	0,7977,12200,15860,17073,19615,20915,
#Partially deleted in new
chr10	6089345	6117457	chr10:6089345-6117457	3	+	6097065	6115556	0	12	626,141,117,167,98,57,142,152,74,99,73,2005,	0,7702,11925,15585,16795,19340,20640,22864,24162,24703,25893,26107,
#Partially deleted in new
chr10	6096909	6110059	chr10:6096909-6110059	0	+	6097065	6110059	789624	6	279,117,167,98,57,74,	0,4361,8021,9231,11776,13076,
#Partially deleted in new
chr10	6104945	6106377	chr10:6104945-6106377	0	+	6104945	6104945	8553170	2	152,237,	0,1195,
#Partially deleted in new
chr10	6104970	6112461	chr10:6104970-6112461	0	+	6104970	6112461	789624	5	127,98,57,142,252,	0,1170,3715,5015,7239,
#Partially deleted in new
chr10	6108487	6112423	chr10:6108487-6112423	0	+	6108487	6108487	8553170	3	255,142,214,	0,1498,3722,
#Deleted in new
chr10	6112701	6115766	chr10:6112701-6115766	0	+	6112701	6112701	8553170	5	367,74,99,73,314,	0,806,1347,2537,2751,
#Deleted in new
chr10	6113362	6115834	chr10:6113362-6115834	0	+	6113362	6113362	8553170	3	219,99,596,	0,686,1876,
#Deleted in new
chr10	6113906	6115834	chr10:6113906-6115834	0	+	6113906	6113906	8553170	2	241,596,	0,1332,
#Deleted in new
chr10	6114146	6115872	chr10:6114146-6115872	0	+	6114146	6114146	8553170	2	1165,420,	0,1306,
#Partially deleted in new
chr10	6144933	6235532	chr10:6144933-6235532	1	+	6144997	6232942	0	15	80,126,97,67,75,57,125,208,147,105,130,63,65,174,2638,	0,68689,70287,71191,71772,72201,74635,75724,76447,76707,77921,79024,79215,81258,87961,
#Partially deleted in new
chr10	6146315	6233368	chr10:6146315-6233368	1	+	6146378	6232942	0	15	181,126,97,67,75,57,125,208,147,105,130,63,65,174,474,	0,67307,68905,69809,70390,70819,73253,74342,75065,75325,76539,77642,77833,79876,86579,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	6149622	6149940	chr10:6149622-6149940	3	+	6149622	6149622	8553170	1	318,	0,
#Partially deleted in new
chr10	6152195	6152277	chr10:6152195-6152277	3	+	6152195	6152195	5263520	1	82,	0,
#Partially deleted in new
chr10	6152206	6152262	chr10:6152206-6152262	3	-	6152206	6152206	5263520	1	56,	0,
#Partially deleted in new
chr10	6163832	6217177	chr10:6163832-6217177	0	+	6213663	6217177	789624	6	179,126,97,67,75,43,	0,49790,51388,52292,52873,53302,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	6197611	6202693	chr10:6197611-6202693	3	-	6197611	6197611	8553170	2	184,254,	0,4828,
#Partially deleted in new
chr10	6202865	6228284	chr10:6202865-6228284	1	+	6203260	6228222	789624	15	471,126,97,67,75,57,125,208,147,105,130,63,65,174,89,	0,10757,12355,13259,13840,14269,16703,17792,18515,18775,19989,21092,21283,23326,25330,
#Partially deleted in new
chr10	6202865	6233090	chr10:6202865-6233090	1	+	6203260	6231305	789624	17	471,126,97,67,75,57,125,208,147,105,130,63,65,174,23,52,196,	0,10757,12355,13259,13840,14269,16703,17792,18515,18775,19989,21092,21283,23326,25330,28397,30029,
#Partially deleted in new
chr10	6202865	6228295	chr10:6202865-6228295	0	+	6203260	6225187	789624	16	471,126,97,67,75,57,125,208,147,105,130,63,65,88,174,100,	0,10757,12355,13259,13840,14269,16703,17792,18515,18775,19989,21092,21283,22295,23326,25330,
#Partially deleted in new
chr10	6202865	6232952	chr10:6202865-6232952	0	+	6203260	6225187	789624	18	471,126,97,67,75,57,125,208,147,105,130,63,65,88,174,23,52,58,	0,10757,12355,13259,13840,14269,16703,17792,18515,18775,19989,21092,21283,22295,23326,25330,28397,30029,
#Partially deleted in new
chr10	6202865	6232959	chr10:6202865-6232959	0	+	6203260	6225187	789624	16	471,126,97,67,75,57,125,208,147,105,130,63,65,88,174,65,	0,10757,12355,13259,13840,14269,16703,17792,18515,18775,19989,21092,21283,22295,23326,30029,
#Partially deleted in new
chr10	6202865	6232959	chr10:6202865-6232959	0	+	6203260	6225187	789624	17	471,126,97,67,75,57,125,208,147,105,130,63,65,88,174,23,65,	0,10757,12355,13259,13840,14269,16703,17792,18515,18775,19989,21092,21283,22295,23326,25330,30029,
#Partially deleted in new
chr10	6202876	6225187	chr10:6202876-6225187	1	+	6203260	6225187	789624	14	460,126,97,67,75,57,125,208,147,105,130,63,65,27,	0,10746,12344,13248,13829,14258,16692,17781,18504,18764,19978,21081,21272,22284,
#Partially deleted in new
chr10	6202876	6231305	chr10:6202876-6231305	1	+	6203260	6231305	789624	16	460,126,97,67,75,57,125,208,147,105,130,63,65,174,23,43,	0,10746,12344,13248,13829,14258,16692,17781,18504,18764,19978,21081,21272,23315,25319,28386,
#Partially deleted in new
chr10	6202899	6235519	chr10:6202899-6235519	1	+	6203260	6232901	0	16	437,126,97,67,75,57,125,208,147,105,130,63,65,174,23,2625,	0,10723,12321,13225,13806,14235,16669,17758,18481,18741,19955,21058,21249,23292,25296,29995,
#Partially deleted in new
chr10	6202930	6235532	chr10:6202930-6235532	3	+	6203260	6232942	0	15	406,126,97,67,75,57,125,208,147,105,130,63,65,174,2638,	0,10692,12290,13194,13775,14204,16638,17727,18450,18710,19924,21027,21218,23261,29964,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr10	6202931	6254644	chr10:6202931-6254644	1	+	6203260	6254369	789624	15	405,126,97,67,75,57,125,208,147,105,130,63,65,174,467,	0,10691,12289,13193,13774,14203,16637,17726,18449,18709,19923,21026,21217,23260,51246,
#Partially deleted in new
chr10	6221403	6233107	chr10:6221403-6233107	0	+	6221403	6232942	789624	5	124,130,63,65,213,	0,1451,2554,2745,11491,
#Partially deleted in new
chr10	6222707	6226447	chr10:6222707-6226447	0	+	6222707	6222707	8553170	4	277,63,65,256,	0,1250,1441,3484,
#Partially deleted in new
chr10	6224165	6233090	chr10:6224165-6233090	0	+	6224165	6229142	789624	5	48,174,23,72,196,	0,2026,4030,4943,8729,
#Partially deleted in new
chr10	6224165	6233090	chr10:6224165-6233090	0	+	6224165	6232942	789624	2	48,196,	0,8729,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	6245730	6245831	chr10:6245730-6245831	3	-	6245730	6245730	8553170	1	101,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	6277686	6335982	chr10:6277686-6335982	3	+	6277686	6277686	789624	7	121,97,1879,64,96,103,726,	0,48859,50245,53266,53524,53814,57570,
#Partially deleted in new
chr10	6293099	6294684	chr10:6293099-6294684	7	-	6293099	6293099	16724991	4	244,294,294,58,	0,552,869,1527,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	6350315	6352762	chr10:6350315-6352762	3	+	6350315	6350315	8553170	1	2447,	0,
#Partially deleted in new
chr10	6427142	6580301	chr10:6427142-6580301	3	-	6428206	6515135	0	18	1220,129,189,139,63,92,174,161,118,110,130,86,32,163,61,200,127,91,	0,3667,14750,29531,35160,37170,51849,56297,58009,58892,64540,69892,70077,71253,80293,83852,87875,153068,
#Partially deleted in new
chr10	6427142	6580301	chr10:6427142-6580301	1	-	6428206	6515135	0	17	1220,129,139,63,92,174,161,118,110,130,86,32,163,61,200,127,91,	0,3667,29531,35160,37170,51849,56297,58009,58892,64540,69892,70077,71253,80293,83852,87875,153068,
#Partially deleted in new
chr10	6427142	6580301	chr10:6427142-6580301	1	-	6428206	6510998	0	17	1220,129,189,139,63,92,174,161,118,110,130,86,32,163,200,127,91,	0,3667,14750,29531,35160,37170,51849,56297,58009,58892,64540,69892,70077,71253,83852,87875,153068,
#Partially deleted in new
chr10	6427142	6512172	chr10:6427142-6512172	1	-	6428206	6512172	789624	17	1220,129,189,139,63,92,174,161,118,110,130,86,32,163,61,200,10,	0,3667,14750,29531,35160,37170,51849,56297,58009,58892,64540,69892,70077,71253,80293,83852,85020,
#Partially deleted in new
chr10	6580418	6584299	chr10:6580418-6584299	1	+	6580418	6580418	789624	2	509,624,	0,3257,
#Partially deleted in new
chr10	6580424	6584028	chr10:6580424-6584028	1	+	6580424	6580424	789624	3	503,64,353,	0,1713,3251,
#Partially deleted in new
chr10	6580610	6584144	chr10:6580610-6584144	0	+	6580610	6580610	8553170	3	317,64,469,	0,1527,3065,
#Deleted in new
chr10	6583675	6585679	chr10:6583675-6585679	0	+	6583675	6583675	8553170	2	243,122,	0,1882,
#Deleted in new
chr10	6583678	6584298	chr10:6583678-6584298	0	+	6583678	6583678	8553170	2	240,181,	0,439,
#Deleted in new
chr10	6583804	6588380	chr10:6583804-6588380	0	+	6583804	6583804	8553170	3	391,155,115,	0,1753,4461,
#Partially deleted in new
chr10	6583804	6591097	chr10:6583804-6591097	0	+	6583804	6583804	8553170	5	114,155,118,131,148,	0,1753,2958,4461,7145,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	6583804	6615950	chr10:6583804-6615950	3	+	6583804	6583804	8553170	7	114,155,131,185,49,61,188,	0,1753,4461,7145,13041,24543,31958,
#Partially deleted in new
chr10	6583804	6591132	chr10:6583804-6591132	0	+	6583804	6583804	8553170	5	114,78,155,131,183,	0,313,1753,4461,7145,
#Partially deleted in new
chr10	6583804	6591105	chr10:6583804-6591105	0	+	6583804	6583804	8553170	3	114,131,156,	0,4461,7145,
#Partially deleted in new
chr10	6583810	6591134	chr10:6583810-6591134	0	+	6583810	6583810	8553170	5	385,155,49,131,185,	0,1747,1987,4455,7139,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	6583860	6613903	chr10:6583860-6613903	0	+	6583860	6583860	8553170	6	58,131,185,49,61,273,	0,4405,7089,12985,24487,29770,
#Deleted in new
chr10	6586223	6586920	chr10:6586223-6586920	0	+	6586223	6586223	8553170	1	697,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	6607286	6615950	chr10:6607286-6615950	0	+	6607286	6607286	8553170	3	129,61,188,	0,1061,8476,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	6607320	6615959	chr10:6607320-6615959	1	+	6607320	6607320	8553170	5	95,61,59,119,197,	0,1027,6310,8198,8442,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	6608347	6616452	chr10:6608347-6616452	0	+	6608347	6608347	8553170	4	61,268,162,447,	0,7022,7415,7658,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	6608375	6616397	chr10:6608375-6616397	1	+	6608375	6608375	8553170	3	33,162,392,	0,7387,7630,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	6618715	6625346	chr10:6618715-6625346	3	+	6618715	6618715	8553170	4	61,256,153,30,	0,2202,2994,6601,
#Partially deleted in new
chr10	6682512	6823789	chr10:6682512-6823789	3	+	6682512	6682512	8553170	7	63,166,145,183,78,186,333,	0,372,26915,98791,134536,139274,140944,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	6709529	6738966	chr10:6709529-6738966	3	+	6709529	6709529	8553170	5	43,238,158,194,610,	0,23200,24438,27905,28827,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	6734038	6738943	chr10:6734038-6738943	1	+	6734038	6734038	8553170	4	488,21,194,587,	0,853,3396,4318,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	6737275	6740532	chr10:6737275-6740532	1	+	6737275	6737275	8553170	2	353,2176,	0,1081,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	6737336	6739432	chr10:6737336-6739432	0	+	6737336	6737336	8553170	1	2096,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	6737417	6840712	chr10:6737417-6840712	3	+	6737417	6737417	8553170	4	211,46,35,322,	0,96225,100556,102973,
#Partially deleted in new
chr10	6774306	6779180	chr10:6774306-6779180	3	-	6774306	6774306	789624	2	629,70,	0,4804,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	6779548	6840818	chr10:6779548-6840818	1	+	6779548	6779548	8553170	7	339,183,165,100,46,35,428,	0,1755,31050,32720,54094,58425,60842,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	6779569	6842906	chr10:6779569-6842906	1	+	6779569	6779569	789624	5	318,183,46,35,2516,	0,1734,54073,58404,60821,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	6779579	6840873	chr10:6779579-6840873	1	+	6779579	6779579	8553170	5	308,183,46,679,483,	0,1724,54063,58394,60811,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	6779585	6781811	chr10:6779585-6781811	0	+	6779585	6779585	8553170	2	302,508,	0,1718,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	6779587	6841158	chr10:6779587-6841158	1	+	6779587	6779587	8553170	6	300,183,307,46,35,768,	0,1716,32662,54055,58386,60803,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	6779587	6834510	chr10:6779587-6834510	0	+	6779587	6779587	8553170	3	300,183,868,	0,1716,54055,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	6779605	6790256	chr10:6779605-6790256	2	+	6779605	6779605	8553170	3	282,183,912,	0,1698,9739,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	6779607	6877888	chr10:6779607-6877888	3	+	6779607	6779607	8553170	6	280,183,46,35,74,613,	0,1696,54035,58366,94192,97668,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	6794739	6841238	chr10:6794739-6841238	1	+	6794739	6794739	8553170	7	356,165,119,78,46,35,848,	0,15859,17510,22309,38903,43234,45651,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	6872943	6879450	chr10:6872943-6879450	1	+	6872943	6872943	8553170	2	930,2175,	0,4332,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	6891456	6920472	chr10:6891456-6920472	3	-	6891456	6891456	8553170	3	147,108,44,	0,393,28972,
#Deleted in new
chr10	7097151	7097675	chr10:7097151-7097675	3	+	7097151	7097151	8553170	2	202,234,	0,290,
#Deleted in new
chr10	7154119	7154236	chr10:7154119-7154236	7	+	7154119	7154119	16724991	1	117,	0,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr10	7158623	7409341	chr10:7158623-7409341	1	-	7163769	7381898	0	21	5287,129,264,167,176,110,140,71,43,114,127,83,148,102,98,247,89,241,95,151,40,	0,12304,13271,13871,17366,30000,38924,41790,43856,47191,61787,69231,84934,89924,118268,125280,127242,209025,211657,223175,250678,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr10	7158623	7411486	chr10:7158623-7411486	3	-	7163769	7381898	0	21	5287,129,264,167,176,110,140,71,43,114,127,83,148,102,98,247,89,241,95,151,142,	0,12304,13271,13871,17366,30000,38924,41790,43856,47191,61787,69231,84934,89924,118268,125280,127242,209025,211657,223175,252721,
#Partially deleted in new
chr10	7284181	7411486	chr10:7284181-7411486	1	-	7285829	7381898	789624	5	1773,241,95,151,142,	0,83467,86099,97617,127163,
#Partially deleted in new
chr10	7295105	7295290	chr10:7295105-7295290	7	-	7295105	7295105	16724991	1	185,	0,
#Partially deleted in new
chr10	7348141	7408745	chr10:7348141-7408745	1	-	7348286	7381898	789624	5	192,241,95,151,13,	0,19507,22139,33657,60591,
#Deleted in new
chr10	7411598	7413467	chr10:7411598-7413467	3	+	7411598	7411598	8553170	1	1869,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	7445557	7471942	chr10:7445557-7471942	3	-	7445557	7445557	8553170	4	235,130,160,32,	0,21839,23876,26353,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	7486702	7486809	chr10:7486702-7486809	3	-	7486702	7486702	8553170	1	107,	0,
#Partially deleted in new
chr10	7533206	7536565	chr10:7533206-7536565	3	+	7533206	7533206	8553170	3	287,199,228,	0,882,3131,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	7559269	7666971	chr10:7559269-7666971	3	-	7563082	7666892	789624	14	4115,378,117,54,560,310,169,117,170,251,102,164,45,169,	0,6760,10398,13872,17183,20485,26631,56712,57843,77958,81484,82657,96361,107533,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	7562423	7619660	chr10:7562423-7619660	1	-	7563082	7619590	789624	10	961,378,117,54,560,310,169,117,170,80,	0,3606,7244,10718,14029,17331,23477,53558,54689,57157,
#Partially deleted in new
chr10	7566036	7570400	chr10:7566036-7570400	0	-	7566036	7566036	8553170	3	371,117,294,	0,3631,4070,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	7569161	7576597	chr10:7569161-7576597	0	-	7569161	7569161	8553170	3	623,54,145,	0,3980,7291,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	7571404	7666998	chr10:7571404-7666998	1	-	7572321	7666892	789624	12	994,54,560,310,169,117,170,251,102,164,45,196,	0,1737,5048,8350,14496,44577,45708,65823,69349,70522,84226,95398,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	7571404	7640779	chr10:7571404-7640779	0	-	7571404	7571404	8553170	9	994,54,560,310,169,117,170,251,26,	0,1737,5048,8350,14496,44577,45708,65823,69349,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	7572771	7578704	chr10:7572771-7578704	0	-	7572771	7572771	8553170	3	424,560,409,	0,3681,5524,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	7572771	7622477	chr10:7572771-7622477	0	-	7572771	7572771	8553170	6	424,560,310,169,117,5365,	0,3681,6983,13129,43210,44341,
#Partially deleted in new
chr10	7576891	7617266	chr10:7576891-7617266	0	-	7600553	7617266	789624	7	121,310,169,37,75,117,154,	0,2863,9009,23637,32528,39090,40221,
#Partially deleted in new
chr10	7703268	7749520	chr10:7703268-7749520	3	+	7703434	7749334	789624	21	250,75,33,170,105,163,108,129,117,169,126,182,186,140,170,138,114,199,173,112,334,	0,1839,3932,5753,9912,14357,17587,18380,20182,23681,24434,26683,28542,29069,31653,35352,39877,40813,41522,43324,45918,
#Partially deleted in new
chr10	7703345	7713383	chr10:7703345-7713383	0	+	7703345	7703345	8553170	5	173,75,33,170,203,	0,1762,3855,5676,9835,
#Partially deleted in new
chr10	7703367	7720901	chr10:7703367-7720901	0	+	7703367	7703367	8553170	6	151,75,33,105,163,46,	0,1740,3833,9813,14258,17488,
#Partially deleted in new
chr10	7703379	7721697	chr10:7703379-7721697	0	+	7703434	7721697	789624	7	139,33,170,105,163,108,49,	0,3821,5642,9801,14246,17476,18269,
#Partially deleted in new
chr10	7703399	7749339	chr10:7703399-7749339	1	+	7703434	7749334	789624	20	119,75,170,105,163,108,129,117,169,126,182,186,140,170,138,114,199,173,112,153,	0,1708,5622,9781,14226,17456,18249,20051,23550,24303,26552,28411,28938,31522,35221,39746,40682,41391,43193,45787,
#Partially deleted in new
chr10	7729864	7732473	chr10:7729864-7732473	0	+	7729864	7729864	8553170	3	269,186,136,	0,1946,2473,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	7750961	7787981	chr10:7750961-7787981	3	-	7756079	7787933	0	13	5181,101,100,69,51,130,61,49,182,123,44,95,162,	0,8928,11495,12761,15091,18254,23869,24789,27876,29094,29302,32119,36858,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	7753224	7766103	chr10:7753224-7766103	0	-	7754063	7766103	789624	6	378,118,101,100,69,51,	0,727,6665,9232,10498,12828,
#Partially deleted in new
chr10	7755813	7766384	chr10:7755813-7766384	0	-	7755813	7755813	8553170	6	329,101,100,69,51,49,	0,4076,6643,7909,10239,10522,
#Partially deleted in new
chr10	7755834	7766359	chr10:7755834-7766359	0	-	7755834	7755834	8553170	5	308,101,100,69,307,	0,4055,6622,7888,10218,
#Partially deleted in new
chr10	7761232	7774878	chr10:7761232-7774878	0	-	7761232	7761232	8553170	6	215,100,69,51,130,48,	0,1224,2490,4820,7983,13598,
#Partially deleted in new
chr10	7788128	7807815	chr10:7788128-7807815	1	+	7788207	7806980	789624	10	135,35,132,205,144,65,156,97,37,157,	0,7992,8918,10861,11643,11898,14141,14629,18845,19530,
#Partially deleted in new
chr10	7788146	7807801	chr10:7788146-7807801	0	+	7788146	7788146	8553170	9	117,132,205,144,65,156,97,37,143,	0,8900,10843,11625,11880,14123,14611,18827,19512,
#Partially deleted in new
chr10	7788158	7796588	chr10:7788158-7796588	0	+	7788158	7788158	8553170	2	105,468,	0,7962,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	7788174	7796895	chr10:7788174-7796895	0	+	7788174	7788174	8553170	3	89,35,290,	0,7946,8431,
#Partially deleted in new
chr10	7788176	7807815	chr10:7788176-7807815	3	+	7788207	7807662	789624	9	87,35,132,205,144,65,156,97,157,	0,7944,8870,10813,11595,11850,14093,14581,19482,
#Partially deleted in new
chr10	7788178	7807793	chr10:7788178-7807793	0	+	7788178	7788178	8553170	4	85,35,37,135,	0,7942,18795,19480,
#Partially deleted in new
chr10	7788183	7800052	chr10:7788183-7800052	0	+	7788183	7788183	8553170	6	80,35,132,205,144,26,	0,7937,8863,10806,11588,11843,
#Partially deleted in new
chr10	7788209	7799550	chr10:7788209-7799550	0	+	7788209	7788209	8553170	4	54,35,132,561,	0,7911,8837,10780,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	7800051	7807801	chr10:7800051-7807801	0	+	7800051	7800051	8553170	6	40,57,156,97,37,143,	0,1461,2218,2706,6922,7607,
#Partially deleted in new
chr10	7802242	7807801	chr10:7802242-7807801	0	+	7802242	7802242	8553170	4	183,97,37,143,	0,515,4731,5416,
#Partially deleted in new
chr10	7818503	8016627	chr10:7818503-8016627	3	+	7818709	8014751	0	7	372,243,1823,83,253,107,1991,	0,5814,145416,158737,190574,195227,196133,
#Deleted in new
chr10	7833617	7833957	chr10:7833617-7833957	7	-	7833617	7833617	16724991	1	340,	0,
#Deleted in new
chr10	8045377	8055896	chr10:8045377-8055896	0	+	8055655	8055896	789624	2	138,610,	0,9909,
#Deleted in new
chr10	8050449	8053484	chr10:8050449-8053484	3	-	8050449	8050449	789624	2	1129,1085,	0,1950,
#Deleted in new
chr10	8050475	8052495	chr10:8050475-8052495	0	-	8050475	8050475	789624	3	249,305,96,	0,798,1924,
#Deleted in new
chr10	8050475	8052495	chr10:8050475-8052495	1	-	8050475	8050475	789624	3	249,330,96,	0,773,1924,
#Deleted in new
chr10	8051540	8053084	chr10:8051540-8053084	3	+	8051540	8051540	8553170	3	79,203,120,	0,894,1424,
#Deleted in new
chr10	8052241	8053256	chr10:8052241-8053256	0	-	8052241	8052241	8553170	2	494,71,	0,944,
#Deleted in new
chr10	8052242	8053449	chr10:8052242-8053449	0	-	8052242	8052242	789624	2	493,327,	0,880,
#Deleted in new
chr10	8053603	8058494	chr10:8053603-8058494	0	+	8055655	8058494	789624	3	175,610,190,	0,1683,4701,
#Partially deleted in new
chr10	8054652	8075203	chr10:8054652-8075203	1	+	8055655	8074023	0	6	239,610,537,146,126,1465,	0,634,3652,9340,14820,19086,
#Partially deleted in new
chr10	8054687	8074894	chr10:8054687-8074894	1	+	8055655	8074023	0	6	204,610,537,146,126,1156,	0,599,3617,9305,14785,19051,
#Partially deleted in new
chr10	8054809	8074890	chr10:8054809-8074890	3	+	8055655	8074023	0	6	82,610,537,143,126,1152,	0,477,3495,9186,14663,18929,
#Partially deleted in new
chr10	8058398	8074064	chr10:8058398-8074064	0	+	8058398	8058398	8553170	3	443,126,326,	0,11074,15340,
#Deleted in new
chr10	8161259	8162192	chr10:8161259-8162192	7	+	8161259	8161259	16724991	1	933,	0,
#Partially deleted in new
chr10	8259330	8268305	chr10:8259330-8268305	3	-	8259330	8259330	789624	5	340,305,96,68,107,	0,1315,6923,7301,8868,
#Deleted in new
chr10	8259330	8260804	chr10:8259330-8260804	0	-	8259330	8259330	8553170	2	340,25,	0,1449,
#Partially deleted in new
chr10	8298896	8301667	chr10:8298896-8301667	3	+	8298896	8298896	8553170	2	231,670,	0,2101,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	8400859	8461863	chr10:8400859-8461863	3	+	8400859	8400859	8553170	4	84,57,110,179,	0,514,60206,60825,
#Deleted in new
chr10	8472718	8472952	chr10:8472718-8472952	7	+	8472718	8472718	16724991	1	234,	0,
#Deleted in new
chr10	8513686	8515106	chr10:8513686-8515106	7	-	8513686	8513686	16724991	1	1420,	0,
#Deleted in new
chr10	8619932	8620608	chr10:8619932-8620608	7	+	8619932	8619932	16724991	1	676,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	8656715	8656831	chr10:8656715-8656831	7	-	8656715	8656715	16724991	1	116,	0,
#Deleted in new
chr10	8724009	8724288	chr10:8724009-8724288	7	+	8724009	8724009	16724991	1	279,	0,
#Partially deleted in new
chr10	8897988	8914596	chr10:8897988-8914596	3	+	8897988	8897988	789624	4	94,81,81,110,	0,4645,15833,16498,
#Deleted in new
chr10	8970124	8973468	chr10:8970124-8973468	3	+	8970124	8970124	8553170	2	148,529,	0,2815,
#Partially deleted in new
chr10	9275832	9287057	chr10:9275832-9287057	3	+	9275832	9275832	8553170	2	28,466,	0,10759,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	9721962	9724416	chr10:9721962-9724416	7	-	9721962	9721962	16724991	1	2454,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	9758782	9759237	chr10:9758782-9759237	1	-	9758782	9758782	8553170	2	185,159,	0,296,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	9758782	9878060	chr10:9758782-9878060	3	-	9758782	9758782	8553170	3	185,115,313,	0,31891,118965,
#Partially deleted in new
chr10	10058721	10063502	chr10:10058721-10063502	3	+	10058721	10058721	789624	4	77,179,112,207,	0,569,2930,4574,
#Deleted in new
chr10	10174229	10174577	chr10:10174229-10174577	7	+	10174229	10174229	16724991	1	348,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	10232610	10232712	chr10:10232610-10232712	3	+	10232610	10232610	8553170	1	102,	0,
#Deleted in new
chr10	10257168	10257466	chr10:10257168-10257466	7	-	10257168	10257168	16724991	1	298,	0,
#Deleted in new
chr10	10365179	10366487	chr10:10365179-10366487	3	-	10365179	10365179	8553170	2	70,265,	0,1043,
#Deleted in new
chr10	10394669	10395737	chr10:10394669-10395737	3	+	10394669	10394669	8553170	1	1068,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	10418738	10462349	chr10:10418738-10462349	3	-	10418738	10418738	8553170	3	858,108,161,	0,15185,43450,
#Deleted in new
chr10	10776222	10776661	chr10:10776222-10776661	7	-	10776222	10776222	16724991	1	439,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	10784436	10794967	chr10:10784436-10794967	0	-	10784436	10784436	8553170	4	233,111,154,129,	0,2208,7935,10402,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	10784436	10794957	chr10:10784436-10794957	0	-	10784436	10784436	8553170	4	233,91,154,119,	0,2208,7935,10402,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	10784437	10794980	chr10:10784437-10794980	0	-	10784437	10784437	8553170	3	232,91,142,	0,2207,10401,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	10784438	10794914	chr10:10784438-10794914	3	-	10784438	10784438	5263520	4	231,91,154,217,	0,2206,7933,10259,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	10784442	10789036	chr10:10784442-10789036	0	-	10784442	10784442	8553170	3	227,91,43,	0,2202,4551,
#Partially deleted in new
chr10	10798396	11331186	chr10:10798396-11331186	1	+	10798764	11329053	789624	15	421,36,197,83,49,135,80,159,64,135,120,198,144,172,731,	0,121567,367089,419028,450756,459341,468201,472269,476660,490021,515742,522792,527439,530529,532059,
#Partially deleted in new
chr10	10798615	11329078	chr10:10798615-11329078	3	+	11165504	11329053	0	15	202,94,36,197,83,49,135,80,159,64,135,120,198,144,153,	0,47447,121348,366870,418809,450537,459122,467982,472050,476441,489802,515523,522573,527220,530310,
#Partially deleted in new
chr10	10798623	11331257	chr10:10798623-11331257	1	+	10798764	11329053	789624	14	194,36,197,83,49,135,80,159,64,135,120,180,144,2332,	0,121340,366862,418801,450529,459114,467974,472042,476433,489794,515515,522583,527212,530302,
#Partially deleted in new
chr10	10934523	10952095	chr10:10934523-10952095	1	-	10934523	10934523	789624	6	890,142,70,89,111,158,	0,9659,11501,11988,12922,17414,
#Partially deleted in new
chr10	10934939	10936663	chr10:10934939-10936663	0	-	10934939	10934939	8553170	2	474,40,	0,1684,
#Partially deleted in new
chr10	10934941	10952095	chr10:10934941-10952095	1	-	10934941	10934941	8553170	7	472,124,142,70,89,111,158,	0,2496,9241,11083,11570,12504,16996,
#Partially deleted in new
chr10	10935233	10952166	chr10:10935233-10952166	0	-	10935233	10935233	8553170	5	180,81,142,89,229,	0,1390,8949,11278,16704,
#Partially deleted in new
chr10	10935233	10952166	chr10:10935233-10952166	0	-	10935233	10935233	789624	4	180,142,89,229,	0,8949,11278,16704,
#Partially deleted in new
chr10	10946046	10952180	chr10:10946046-10952180	0	-	10946046	10946046	8553170	5	48,89,534,111,243,	0,465,739,1399,5891,
#Partially deleted in new
chr10	10946047	10952234	chr10:10946047-10952234	0	-	10946047	10946047	8553170	6	47,89,337,69,111,341,	0,464,738,1203,1398,5846,
#Partially deleted in new
chr10	10946064	10952137	chr10:10946064-10952137	0	-	10946064	10946064	8553170	4	30,89,111,342,	0,447,1381,5731,
#Partially deleted in new
chr10	10946064	10952136	chr10:10946064-10952136	0	-	10946064	10946064	8553170	6	30,89,337,69,111,199,	0,447,721,1186,1381,5873,
#Deleted in new
chr10	10946064	10948401	chr10:10946064-10948401	0	-	10946064	10946064	8553170	3	536,111,149,	0,1381,2188,
#Partially deleted in new
chr10	10946064	10951969	chr10:10946064-10951969	2	-	10946064	10946064	8553170	4	30,89,111,76,	0,447,1381,5829,
#Deleted in new
chr10	10946064	10948335	chr10:10946064-10948335	0	-	10946064	10946064	8553170	4	30,89,771,83,	0,447,721,2188,
#Partially deleted in new
chr10	10946064	10951976	chr10:10946064-10951976	0	-	10946064	10946064	8553170	5	30,89,534,111,83,	0,447,721,1381,5829,
#Partially deleted in new
chr10	10946857	10952095	chr10:10946857-10952095	0	-	10946857	10946857	8553170	3	462,111,300,	0,588,4938,
#Partially deleted in new
chr10	10947163	10952166	chr10:10947163-10952166	0	-	10947163	10947163	8553170	2	393,273,	0,4730,
#Partially deleted in new
chr10	10960150	10970816	chr10:10960150-10970816	3	+	10960150	10960150	8553170	3	213,191,133,	0,6411,10533,
#Partially deleted in new
chr10	11005320	11334353	chr10:11005320-11334353	1	+	11005387	11329053	0	13	120,197,83,49,135,80,159,64,135,120,180,144,5428,	0,160165,212104,243832,252417,261277,265345,269736,283097,308818,315886,320515,323605,
#Partially deleted in new
chr10	11005323	11334358	chr10:11005323-11334358	1	+	11005387	11329053	0	14	117,197,83,49,135,80,159,64,135,120,180,144,172,3903,	0,160162,212101,243829,252414,261274,265342,269733,283094,308815,315883,320512,323602,325132,
#Partially deleted in new
chr10	11005334	11314789	chr10:11005334-11314789	0	+	11005387	11249187	789624	8	106,197,49,135,159,64,135,651,	0,160151,243818,252403,265331,269722,283083,308804,
#Partially deleted in new
chr10	11005376	11330658	chr10:11005376-11330658	1	+	11005387	11329053	789624	14	64,197,83,49,135,80,159,64,135,120,198,144,172,203,	0,160109,212048,243776,252361,261221,265289,269680,283041,308762,315812,320459,323549,325079,
#Deleted in new
chr10	11010163	11011119	chr10:11010163-11011119	3	-	11010163	11010163	8553170	2	31,213,	0,743,
#Partially deleted in new
chr10	11017922	11329053	chr10:11017922-11329053	1	+	11018089	11329053	789624	13	241,197,83,49,135,80,159,64,135,120,198,144,128,	0,147563,199502,231230,239815,248675,252743,257134,270495,296216,303266,307913,311003,
#Partially deleted in new
chr10	11017929	11336667	chr10:11017929-11336667	1	+	11018089	11329053	789624	14	234,197,83,49,135,80,159,64,135,120,198,144,172,6212,	0,147556,199495,231223,239808,248668,252736,257127,270488,296209,303259,307906,310996,312526,
#Partially deleted in new
chr10	11017965	11329279	chr10:11017965-11329279	1	+	11018089	11329053	789624	14	198,197,83,49,135,80,159,64,135,132,42,180,144,354,	0,147520,199459,231187,239772,248632,252700,257091,270452,296173,302891,303241,307870,310960,
#Partially deleted in new
chr10	11018775	11331299	chr10:11018775-11331299	1	+	11165504	11329053	0	13	89,197,83,49,135,80,159,64,135,120,198,144,2374,	0,146710,198649,230377,238962,247822,251890,256281,269642,295363,302413,307060,310150,
#Deleted in new
chr10	11030333	11030868	chr10:11030333-11030868	3	-	11030333	11030333	8553170	2	155,278,	0,257,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	11071540	11105504	chr10:11071540-11105504	3	-	11071540	11071540	789624	6	154,388,121,125,403,36,	0,3407,24761,25744,26531,33928,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	11092275	11098162	chr10:11092275-11098162	0	-	11092275	11092275	8553170	4	120,121,125,91,	0,4026,5009,5796,
#Deleted in new
chr10	11097313	11098160	chr10:11097313-11098160	0	-	11097313	11097313	8553170	2	55,89,	0,758,
#Partially deleted in new
chr10	11098247	11105504	chr10:11098247-11105504	0	-	11098247	11098247	8553170	3	227,69,36,	0,3866,7221,
#Partially deleted in new
chr10	11165029	11334358	chr10:11165029-11334358	1	+	11165504	11329053	0	13	288,197,83,49,135,80,159,64,135,120,198,144,5433,	0,456,52395,84123,92708,101568,105636,110027,123388,149109,156159,160806,163896,
#Partially deleted in new
chr10	11165029	11336675	chr10:11165029-11336675	1	+	11165504	11329053	0	14	288,197,83,49,135,80,159,64,135,120,198,144,172,6220,	0,456,52395,84123,92708,101568,105636,110027,123388,149109,156159,160806,163896,165426,
#Partially deleted in new
chr10	11165139	11330639	chr10:11165139-11330639	1	+	11165504	11329053	0	14	178,197,83,49,135,80,159,64,135,132,180,144,172,184,	0,346,52285,84013,92598,101458,105526,109917,123278,148999,156067,160696,163786,165316,
#Partially deleted in new
chr10	11165483	11331277	chr10:11165483-11331277	1	+	11165504	11329053	789624	12	199,83,49,135,80,159,64,135,132,180,172,822,	0,51941,83669,92254,101114,105182,109573,122934,148655,155723,163442,164972,
#Partially deleted in new
chr10	11165483	11329289	chr10:11165483-11329289	0	+	11165504	11249187	789624	10	199,49,135,159,64,135,120,180,144,364,	0,83669,92254,105182,109573,122934,148655,155723,160352,163442,
#Partially deleted in new
chr10	11165485	11329279	chr10:11165485-11329279	1	+	11165504	11329053	789624	13	197,83,49,135,80,159,64,135,132,42,180,144,354,	0,51939,83667,92252,101112,105180,109571,122932,148653,155371,155721,160350,163440,
#Deleted in new
chr10	11168921	11171376	chr10:11168921-11171376	3	-	11168921	11168921	8553170	2	315,115,	0,2340,
#Deleted in new
chr10	11316833	11319884	chr10:11316833-11319884	3	-	11316833	11316833	789624	2	2377,91,	0,2960,
#Deleted in new
chr10	11395807	11398792	chr10:11395807-11398792	3	+	11395807	11395807	8553170	1	2985,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr10	11453945	11611754	chr10:11453945-11611754	1	-	11462440	11597634	789624	15	9904,153,100,66,95,121,49,110,108,81,40,83,68,87,312,	0,27824,31025,31223,31871,35156,36886,39173,47155,55649,64589,71440,73554,143685,157497,
#Partially deleted in new
chr10	11460509	11532275	chr10:11460509-11532275	3	-	11462440	11532232	789624	14	3340,153,100,66,95,121,49,110,108,81,40,83,68,98,	0,21260,24461,24659,25307,28592,30322,32609,40591,49085,58025,64876,66990,71668,
#Partially deleted in new
chr10	11460509	11573737	chr10:11460509-11573737	1	-	11462440	11573678	789624	14	3340,153,100,66,95,121,49,110,108,81,40,83,68,132,	0,21260,24461,24659,25307,28592,30322,32609,40591,49085,58025,64876,66990,113096,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	11563186	11573496	chr10:11563186-11573496	0	-	11563186	11563186	8553170	2	2452,39,	0,10271,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	11564126	11611666	chr10:11564126-11611666	0	-	11564126	11564126	789624	3	1512,87,224,	0,33504,47316,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	11564126	11573841	chr10:11564126-11573841	1	-	11565564	11573678	789624	2	1512,236,	0,9479,
#Deleted in new
chr10	11611304	11612227	chr10:11611304-11612227	3	+	11611304	11611304	8553170	1	923,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	11679674	11680514	chr10:11679674-11680514	3	+	11679674	11679674	8553170	1	840,	0,
#Partially deleted in new
chr10	11742365	11764070	chr10:11742365-11764070	3	+	11742576	11763544	0	5	381,122,98,201,847,	0,4983,7129,13042,20858,
#Partially deleted in new
chr10	11742445	11755581	chr10:11742445-11755581	0	+	11742576	11755581	789624	4	460,122,98,174,	0,4903,7049,12962,
#Partially deleted in new
chr10	11747274	11763351	chr10:11747274-11763351	0	+	11747397	11763351	789624	4	196,98,201,128,	0,2220,8133,15949,
#Partially deleted in new
chr10	11747449	11755730	chr10:11747449-11755730	0	+	11747449	11747449	8553170	3	21,98,386,	0,2045,7895,
#Partially deleted in new
chr10	11823338	11866776	chr10:11823338-11866776	0	+	11823338	11823338	8553170	4	132,219,131,246,	0,28658,39573,43192,
#Partially deleted in new
chr10	11823397	11872277	chr10:11823397-11872277	3	+	11852077	11870406	789624	4	73,219,253,2788,	0,28599,43133,46092,
#Partially deleted in new
chr10	11823397	11870872	chr10:11823397-11870872	1	+	11852077	11870406	789624	5	73,219,253,344,757,	0,28599,43133,46092,46718,
#Partially deleted in new
chr10	11831682	11866647	chr10:11831682-11866647	0	+	11852077	11866647	789624	3	140,219,117,	0,20314,34848,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	11849607	11894700	chr10:11849607-11894700	3	-	11849607	11849607	789624	6	2149,121,114,136,107,519,	0,7657,13209,19758,38239,44574,
#Partially deleted in new
chr10	11857288	11874795	chr10:11857288-11874795	0	-	11857288	11857288	8553170	4	97,114,136,128,	0,5528,12077,17379,
#Deleted in new
chr10	11869643	11870875	chr10:11869643-11870875	1	+	11869686	11870406	789624	1	1232,	0,
#Partially deleted in new
chr10	11920021	12035897	chr10:11920021-12035897	1	-	11921297	12035423	0	21	1286,121,142,168,99,105,140,184,276,204,186,117,114,109,86,104,150,198,161,780,839,	0,9843,11619,16523,22643,23042,28347,32044,35210,36298,39149,43987,47319,59035,77650,79884,81654,84508,94002,108723,115037,
#Partially deleted in new
chr10	11920021	12042834	chr10:11920021-12042834	1	-	11921297	12035423	0	22	1286,121,142,168,99,105,140,184,276,204,186,117,114,109,86,104,150,198,161,780,383,80,	0,9843,11619,16523,22643,23042,28347,32044,35210,36298,39149,43987,47319,59035,77650,79884,81654,84508,94002,108723,115037,122733,
#Partially deleted in new
chr10	11920022	12043170	chr10:11920022-12043170	3	-	11921297	12035423	0	22	1285,121,142,168,99,105,140,184,276,204,186,117,114,109,86,104,150,198,161,780,383,257,	0,9842,11618,16522,22642,23041,28346,32043,35209,36297,39148,43986,47318,59034,77649,79883,81653,84507,94001,108722,115036,122891,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	11923180	11923288	chr10:11923180-11923288	3	+	11923180	11923180	8553170	1	108,	0,
#Partially deleted in new
chr10	12035058	12043170	chr10:12035058-12043170	0	-	12035058	12035058	8553170	2	383,257,	0,7855,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr10	12068971	12123225	chr10:12068971-12123225	3	+	12069033	12120888	789624	17	216,156,212,195,270,172,199,313,85,140,151,107,165,83,170,86,2439,	0,12500,15568,18563,20014,22541,25101,28712,31206,32070,37274,38937,43928,48701,49777,51210,51815,
#Partially deleted in new
chr10	12069023	12091643	chr10:12069023-12091643	0	+	12069033	12091643	789624	5	164,156,212,270,131,	0,12448,15516,19962,22489,
#Partially deleted in new
chr10	12081523	12097958	chr10:12081523-12097958	0	+	12081523	12081523	8553170	4	104,195,199,275,	0,6011,12549,16160,
#Partially deleted in new
chr10	12089174	12094301	chr10:12089174-12094301	0	+	12089174	12094301	789624	3	81,172,229,	0,2338,4898,
#Partially deleted in new
chr10	12094259	12113029	chr10:12094259-12113029	0	+	12094259	12108001	789624	6	12,313,85,140,107,130,	0,3424,5918,6782,13649,18640,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	12116279	12116379	chr10:12116279-12116379	3	-	12116279	12116279	8553170	1	100,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	12118778	12120359	chr10:12118778-12120359	0	+	12118778	12118778	8553170	2	140,178,	0,1403,
#Partially deleted in new
chr10	12129636	12155404	chr10:12129636-12155404	1	+	12129787	12155328	789624	7	158,68,66,79,132,110,94,	0,3604,6468,13480,19958,20215,25674,
#Partially deleted in new
chr10	12129640	12165404	chr10:12129640-12165404	1	+	12129787	12164454	789624	11	154,68,79,132,110,154,161,198,192,77,1137,	0,3600,13476,19954,20211,26137,27266,28267,31289,32572,34627,
#Partially deleted in new
chr10	12129665	12157963	chr10:12129665-12157963	0	+	12129787	12157963	789624	7	129,68,66,79,132,161,56,	0,3575,6439,13451,19929,27241,28242,
#Partially deleted in new
chr10	12129693	12169961	chr10:12129693-12169961	0	+	12129787	12167765	789624	13	101,68,66,79,132,110,154,161,198,192,77,141,704,	0,3547,6411,13423,19901,20158,26084,27213,28214,31236,32519,38059,39564,
#Partially deleted in new
chr10	12129698	12164827	chr10:12129698-12164827	3	+	12129787	12164454	789624	12	96,68,66,79,132,110,154,161,198,192,77,560,	0,3542,6406,13418,19896,20153,26079,27208,28209,31231,32514,34569,
#Partially deleted in new
chr10	12129698	12169961	chr10:12129698-12169961	0	+	12129698	12129698	789624	14	96,68,66,133,79,132,110,154,161,198,192,77,141,704,	0,3542,6406,12734,13418,19896,20153,26079,27208,28209,31231,32514,38054,39559,
#Partially deleted in new
chr10	12129700	12169956	chr10:12129700-12169956	1	+	12129787	12169327	789624	12	94,68,66,79,132,110,154,161,198,192,77,699,	0,3540,6404,13416,19894,20151,26077,27206,28207,31229,32512,39557,
#Partially deleted in new
chr10	12129701	12158048	chr10:12129701-12158048	0	+	12129787	12156933	789624	8	93,68,66,79,132,110,161,141,	0,3539,6403,13415,19893,20150,27205,28206,
#Partially deleted in new
chr10	12129726	12165412	chr10:12129726-12165412	1	+	12129787	12164454	789624	11	68,68,66,79,132,110,154,161,192,77,1145,	0,3514,6378,13390,19868,20125,26051,27180,31203,32486,34541,
#Partially deleted in new
chr10	12129732	12153820	chr10:12129732-12153820	1	+	12129787	12153782	789624	7	62,68,66,79,132,110,83,	0,3508,6372,13384,19862,20119,24005,
#Partially deleted in new
chr10	12136108	12149767	chr10:12136108-12149767	0	+	12136108	12149737	789624	3	62,79,173,	0,7008,13486,
#Partially deleted in new
chr10	12143139	12158043	chr10:12143139-12158043	0	+	12143139	12158043	789624	4	56,132,110,136,	0,6455,6712,14768,
#Partially deleted in new
chr10	12149855	12164547	chr10:12149855-12164547	0	+	12149855	12164454	789624	5	106,154,161,77,280,	0,5922,7051,12357,14412,
#Partially deleted in new
chr10	12157018	12158285	chr10:12157018-12158285	0	+	12157018	12157018	8553170	2	49,378,	0,889,
#Partially deleted in new
chr10	12165324	12196124	chr10:12165324-12196124	3	-	12167701	12186291	0	10	2487,54,9,102,96,108,50,68,104,355,	0,5392,5575,7440,8393,12468,13758,19564,20904,30445,
#Partially deleted in new
chr10	12167575	12195822	chr10:12167575-12195822	1	-	12167701	12186291	789624	11	236,54,9,102,96,108,50,39,68,104,53,	0,3141,3324,5189,6142,10217,11507,16918,17313,18653,28194,
#Partially deleted in new
chr10	12167576	12196144	chr10:12167576-12196144	1	-	12167701	12186291	0	10	235,54,13,98,96,108,50,68,104,375,	0,3140,3323,5192,6141,10216,11506,17312,18652,28193,
#Partially deleted in new
chr10	12167671	12195860	chr10:12167671-12195860	0	-	12167671	12167671	8553170	11	140,54,9,102,96,108,50,95,68,104,91,	0,3045,3228,5093,6046,10121,11411,12723,17217,18557,28098,
#Partially deleted in new
chr10	12167737	12179132	chr10:12167737-12179132	0	-	12170852	12179132	789624	6	74,192,102,96,108,50,	0,2979,5027,5980,10055,11345,
#Partially deleted in new
chr10	12169721	12195869	chr10:12169721-12195869	1	-	12170145	12186291	789624	10	435,54,9,102,96,108,50,68,104,100,	0,995,1178,3043,3996,8071,9361,15167,16507,26048,
#Partially deleted in new
chr10	12170231	12195822	chr10:12170231-12195822	1	-	12170852	12186291	789624	8	677,102,96,108,50,68,104,53,	0,2533,3486,7561,8851,14657,15997,25538,
#Partially deleted in new
chr10	12172489	12173813	chr10:12172489-12173813	0	-	12172489	12172489	8553170	2	377,96,	0,1228,
#Partially deleted in new
chr10	12177842	12195845	chr10:12177842-12195845	0	-	12177842	12186291	789624	5	58,104,68,104,76,	0,1186,7046,8386,17927,
#Partially deleted in new
chr10	12195964	12230978	chr10:12195964-12230978	0	+	12196245	12230978	789624	8	59,190,72,58,33,96,107,31,	0,165,2740,14002,14325,19775,21396,34983,
#Partially deleted in new
chr10	12195965	12250588	chr10:12195965-12250588	3	+	12196245	12250337	789624	13	354,72,58,33,96,107,49,76,123,29,129,138,278,	0,2739,14001,14324,19774,21395,34982,39082,41178,42491,50183,53615,54345,
#Partially deleted in new
chr10	12196129	12249706	chr10:12196129-12249706	0	+	12196129	12196129	8553170	11	190,72,58,33,96,107,49,76,123,29,126,	0,2575,13837,14160,19610,21231,34818,38918,41014,42327,53451,
#Partially deleted in new
chr10	12196195	12198876	chr10:12196195-12198876	0	+	12196195	12196195	8553170	2	124,172,	0,2509,
#Partially deleted in new
chr10	12196222	12250359	chr10:12196222-12250359	1	+	12196245	12250337	789624	12	97,72,58,33,96,107,49,76,29,129,138,49,	0,2482,13744,14067,19517,21138,34725,38825,42234,49926,53358,54088,
#Partially deleted in new
chr10	12196231	12237224	chr10:12196231-12237224	0	+	12196245	12237224	789624	8	88,72,58,33,107,49,76,81,	0,2473,13735,14058,21129,34716,38816,40912,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	12217413	12250529	chr10:12217413-12250529	0	+	12217413	12217413	8553170	9	54,49,76,123,73,29,129,138,219,	0,13534,17634,19730,20048,21043,28735,32167,32897,
#Partially deleted in new
chr10	12230947	12250589	chr10:12230947-12250589	0	+	12230947	12250337	789624	6	49,76,123,29,129,279,	0,4100,6196,7509,15201,19363,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	12244750	12246158	chr10:12244750-12246158	0	-	12244750	12244750	8553170	2	596,281,	0,1127,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	12245627	12247845	chr10:12245627-12247845	3	-	12245627	12245627	8553170	2	1481,433,	0,1785,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	12246053	12250319	chr10:12246053-12250319	0	+	12246053	12246053	8553170	2	224,739,	0,3527,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	12328131	12328389	chr10:12328131-12328389	3	-	12328131	12328131	8553170	1	258,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	12349481	12835545	chr10:12349481-12835545	3	+	12349818	12828887	0	11	429,132,75,139,127,76,113,79,88,118,6777,	0,203743,317254,411466,420191,441676,464713,466768,474983,476091,479287,
#Partially deleted in new
chr10	12349651	12666949	chr10:12349651-12666949	0	+	12349651	12349651	8553170	2	259,214,	0,317084,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	12349732	12826143	chr10:12349732-12826143	1	+	12349818	12825725	0	10	178,132,75,139,127,76,113,79,88,571,	0,203492,317003,411215,419940,441425,464462,466517,474732,475840,
#Deleted in new
chr10	12415927	12416000	chr10:12415927-12416000	3	+	12415927	12415927	8553170	1	73,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	12456482	12456631	chr10:12456482-12456631	3	+	12456482	12456482	8553170	1	149,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	12563150	12567351	chr10:12563150-12567351	3	+	12563150	12563150	8553170	2	1845,1887,	0,2314,
#Deleted in new
chr10	12578752	12578823	chr10:12578752-12578823	3	+	12578752	12578752	5263520	1	71,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	12725253	12725353	chr10:12725253-12725353	3	-	12725253	12725253	5263520	1	100,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	12760575	12829736	chr10:12760575-12829736	1	+	12760575	12828887	789624	9	17,139,127,76,113,79,88,118,968,	0,372,9097,30582,53619,55674,63889,64997,68193,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	12877458	12965275	chr10:12877458-12965275	3	+	12877458	12877458	8553170	5	349,161,200,412,824,	0,585,21053,51065,86993,
#Partially deleted in new
chr10	12896624	13001697	chr10:12896624-13001697	3	-	12898415	13001570	789624	3	2055,175,501,	0,101713,104572,
#Partially deleted in new
chr10	12896626	13099652	chr10:12896626-13099652	1	-	12898415	12998511	789624	7	2053,175,268,233,78,226,147,	0,101711,153047,177241,201898,202457,202879,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	12924678	12924785	chr10:12924678-12924785	7	-	12924678	12924678	16724991	1	107,	0,
#Deleted in new
chr10	13057901	13058676	chr10:13057901-13058676	7	-	13057901	13057901	16724991	1	775,	0,
#Partially deleted in new
chr10	13099448	13136923	chr10:13099448-13136923	1	+	13109122	13136866	0	15	510,152,177,203,183,74,153,103,116,150,94,159,131,80,179,	0,8689,9663,10825,13004,16818,19439,22936,24546,25969,26497,28296,32618,34053,37296,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr10	13099602	13137129	chr10:13099602-13137129	1	+	13109122	13136866	0	15	356,152,177,203,183,74,135,103,116,150,94,159,131,80,385,	0,8535,9509,10671,12850,16664,19303,22782,24392,25815,26343,28142,32464,33899,37142,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	13100158	13109662	chr10:13100158-13109662	0	+	13100158	13100158	8553170	3	144,177,190,	0,8953,9314,
#Partially deleted in new
chr10	13100162	13118980	chr10:13100162-13118980	0	+	13109122	13112463	789624	5	140,177,183,74,93,	0,8949,12290,16104,18725,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	13100168	13138308	chr10:13100168-13138308	1	+	13109122	13136866	0	14	134,177,203,183,74,153,103,116,150,94,159,131,80,1564,	0,8943,10105,12284,16098,18719,22216,23826,25249,25777,27576,31898,33333,36576,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr10	13100172	13138291	chr10:13100172-13138291	1	+	13109122	13136866	0	16	130,152,54,192,203,183,74,153,103,116,150,94,159,131,80,1547,	0,7965,8789,8924,10101,12280,16094,18715,22212,23822,25245,25773,27572,31894,33329,36572,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr10	13100172	13138291	chr10:13100172-13138291	3	+	13109122	13136866	0	16	130,152,54,177,203,183,74,135,103,116,150,94,159,131,80,1547,	0,7965,8789,8939,10101,12280,16094,18733,22212,23822,25245,25773,27572,31894,33329,36572,
#Partially deleted in new
chr10	13100172	13116327	chr10:13100172-13116327	0	+	13109122	13110202	789624	5	130,177,297,183,61,	0,8939,10007,12280,16094,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr10	13100224	13138291	chr10:13100224-13138291	1	+	13109122	13136866	0	15	78,152,177,203,183,74,153,103,116,150,94,159,131,80,1547,	0,7913,8887,10049,12228,16042,18663,22160,23770,25193,25721,27520,31842,33277,36520,
#Partially deleted in new
chr10	13104573	13104793	chr10:13104573-13104793	7	-	13104573	13104573	16724991	1	220,	0,
#Partially deleted in new
chr10	13112486	13116540	chr10:13112486-13116540	0	+	13112486	13116440	789624	2	149,274,	0,3780,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	13116267	13123198	chr10:13116267-13123198	0	+	13116267	13122914	789624	4	73,153,103,335,	0,2620,6117,6596,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	13131318	13136918	chr10:13131318-13136918	0	+	13131318	13131318	8553170	4	257,131,80,174,	0,748,2183,5426,
#Deleted in new
chr10	13139195	13139533	chr10:13139195-13139533	7	-	13139195	13139195	16724991	1	338,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	13142184	13142977	chr10:13142184-13142977	7	-	13142184	13142184	16724991	1	793,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	13156683	13158136	chr10:13156683-13158136	7	-	13156683	13156683	16724991	1	1453,	0,
#Deleted in new
chr10	13159476	13159777	chr10:13159476-13159777	7	-	13159476	13159476	16724991	1	301,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr10	13161553	13211104	chr10:13161553-13211104	1	+	13164202	13209310	789624	20	53,82,342,105,138,172,166,168,117,200,101,111,118,229,145,119,114,146,43,1878,	0,2574,9368,10822,11074,13956,18888,21379,24610,27327,29745,30701,30897,33487,36069,37135,39867,42665,47537,47673,
#Partially deleted in new
chr10	13161578	13172474	chr10:13161578-13172474	0	+	13171154	13172474	789624	3	28,342,99,	0,9343,10797,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr10	13161578	13209736	chr10:13161578-13209736	3	+	13164202	13209310	789624	20	28,82,342,105,141,172,166,168,117,200,101,111,118,229,145,119,114,146,43,510,	0,2549,9343,10797,11046,13931,18863,21354,24585,27302,29720,30676,30872,33462,36044,37110,39842,42640,47512,47648,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr10	13164127	13211104	chr10:13164127-13211104	1	+	13164202	13209160	789624	18	82,342,105,138,172,166,168,117,200,101,111,118,229,145,119,114,146,2014,	0,6794,8248,8500,11382,16314,18805,22036,24753,27171,28127,28323,30913,33495,34561,37293,40091,44963,
#Partially deleted in new
chr10	13192490	13195580	chr10:13192490-13195580	0	+	13192490	13192490	8553170	2	78,540,	0,2550,
#Partially deleted in new
chr10	13195085	13201872	chr10:13195085-13201872	0	+	13195085	13195085	8553170	4	184,145,119,452,	0,2537,3603,6335,
#Partially deleted in new
chr10	13198762	13204526	chr10:13198762-13204526	0	+	13198762	13198762	8553170	3	45,114,308,	0,2658,5456,
#Partially deleted in new
chr10	13221766	13234331	chr10:13221766-13234331	1	-	13222102	13234258	789624	5	434,99,96,66,131,	0,7844,11771,11968,12434,
#Partially deleted in new
chr10	13221766	13234334	chr10:13221766-13234334	3	-	13222102	13234258	789624	4	434,99,96,134,	0,7844,11771,12434,
#Partially deleted in new
chr10	13277795	13299763	chr10:13277795-13299763	1	-	13278300	13294541	0	8	559,135,150,182,82,169,111,344,	0,3180,5894,10564,14035,16632,17700,21624,
#Partially deleted in new
chr10	13277799	13300101	chr10:13277799-13300101	3	-	13278300	13300042	0	9	555,135,150,182,82,169,111,59,134,	0,3176,5890,10560,14031,16628,17696,20387,22168,
#Partially deleted in new
chr10	13277842	13302412	chr10:13277842-13302412	1	-	13278300	13302007	789624	9	512,135,150,182,88,169,111,55,427,	0,3133,5847,10517,13982,16585,17653,20344,24143,
#Partially deleted in new
chr10	13283689	13299549	chr10:13283689-13299549	0	-	13283689	13294541	789624	7	150,182,82,169,111,59,130,	0,4670,8141,10738,11806,14497,15730,
#Partially deleted in new
chr10	13288411	13300052	chr10:13288411-13300052	0	-	13288411	13300042	789624	6	130,88,169,111,59,85,	0,3413,6016,7084,9775,11556,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	13291460	13294987	chr10:13291460-13294987	0	-	13291460	13291460	8553170	2	452,560,	0,2967,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	13295227	13300097	chr10:13295227-13300097	0	-	13295227	13295227	8553170	3	379,59,130,	0,2959,4740,
#Deleted in new
chr10	13308144	13308447	chr10:13308144-13308447	7	-	13308144	13308144	16724991	1	303,	0,
#Partially deleted in new
chr10	13317423	13348297	chr10:13317423-13348297	3	-	13319141	13344950	0	9	1933,213,100,91,155,108,104,271,298,	0,5411,10927,12274,16393,18819,21281,27334,30576,
#Partially deleted in new
chr10	13317438	13348298	chr10:13317438-13348298	1	-	13319141	13338800	0	8	1918,213,100,91,155,108,104,299,	0,5396,10912,12259,16378,18804,21266,30561,
#Partially deleted in new
chr10	13318079	13348280	chr10:13318079-13348280	1	-	13319141	13344950	0	8	1277,100,91,155,108,104,271,281,	0,10271,11618,15737,18163,20625,26678,29920,
#Partially deleted in new
chr10	13333876	13347358	chr10:13333876-13347358	0	-	13333876	13344950	789624	5	95,108,104,271,82,	0,2366,4828,10881,13400,
#Partially deleted in new
chr10	13333900	13340790	chr10:13333900-13340790	0	-	13333900	13338800	789624	4	71,108,104,100,	0,2342,4804,6790,
#Partially deleted in new
chr10	13338715	13345460	chr10:13338715-13345460	0	-	13338715	13338715	8553170	2	93,703,	0,6042,
#Partially deleted in new
chr10	13415201	13423133	chr10:13415201-13423133	3	+	13415201	13415201	8553170	2	55,399,	0,7533,
#Partially deleted in new
chr10	13438483	13460083	chr10:13438483-13460083	0	-	13438483	13438483	8553170	4	1014,51,120,579,	0,8782,14055,21021,
#Partially deleted in new
chr10	13438636	13502976	chr10:13438636-13502976	3	-	13439171	13500069	789624	9	861,54,120,226,266,123,303,170,116,	0,8629,13902,42262,53974,58129,61141,61873,64224,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	13441087	13481073	chr10:13441087-13481073	0	-	13447257	13481073	789624	3	6229,120,175,	0,11451,39811,
#Partially deleted in new
chr10	13441354	13502945	chr10:13441354-13502945	1	-	13441742	13500069	789624	8	396,51,120,226,266,123,342,85,	0,5911,11184,39544,51256,55411,58384,61506,
#Partially deleted in new
chr10	13442979	13452614	chr10:13442979-13452614	0	-	13442979	13442979	8553170	3	424,54,76,	0,4286,9559,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	13445289	13452637	chr10:13445289-13452637	0	-	13445289	13445289	8553170	3	271,51,99,	0,1976,7249,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	13445315	13480976	chr10:13445315-13480976	0	-	13445315	13445315	8553170	5	245,57,51,120,78,	0,1169,1950,7223,35583,
#Partially deleted in new
chr10	13492691	13496929	chr10:13492691-13496929	0	-	13492691	13492691	8553170	2	185,164,	0,4074,
#Partially deleted in new
chr10	13496787	13528974	chr10:13496787-13528974	0	-	13496787	13496787	8553170	4	101,303,84,502,	0,2990,29350,31685,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	13511205	13511313	chr10:13511205-13511313	3	-	13511205	13511205	8553170	1	108,	0,
#Deleted in new
chr10	13528515	13530262	chr10:13528515-13530262	3	+	13528515	13528515	8553170	2	137,243,	0,1504,
#Partially deleted in new
chr10	13586926	13630868	chr10:13586926-13630868	3	+	13587086	13630340	0	10	226,78,105,114,147,69,141,72,156,609,	0,10531,13317,18704,23112,24688,26814,27088,29471,43333,
#Partially deleted in new
chr10	13586938	13614060	chr10:13586938-13614060	0	+	13591867	13614060	789624	10	214,121,78,27,105,114,147,69,141,46,	0,4829,10519,10706,13305,18692,23100,24676,26802,27076,
#Partially deleted in new
chr10	13586967	13611652	chr10:13586967-13611652	0	+	13591867	13611652	789624	7	185,121,78,105,114,147,38,	0,4800,10490,13276,18663,23071,24647,
#Partially deleted in new
chr10	13591459	13592323	chr10:13591459-13592323	7	-	13591459	13591459	16724991	1	864,	0,
#Partially deleted in new
chr10	13610046	13655929	chr10:13610046-13655929	3	+	13610046	13654385	789624	7	139,69,141,72,156,75,552,	0,1568,3694,3968,6351,44306,45331,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	13616530	13645072	chr10:13616530-13645072	0	+	13616530	13630340	789624	5	23,206,124,223,156,	0,13729,21466,22170,28386,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	13630283	13645011	chr10:13630283-13645011	0	+	13630283	13632563	789624	5	53,266,124,223,95,	0,2276,7713,8417,14633,
#Partially deleted in new
chr10	13631142	13644984	chr10:13631142-13644984	1	+	13631142	13631142	8553170	4	221,266,278,68,	0,1417,12345,13774,
#Partially deleted in new
chr10	13631287	13655482	chr10:13631287-13655482	0	+	13631287	13631287	8553170	4	76,158,82,1130,	0,13629,21120,23065,
#Partially deleted in new
chr10	13631295	13655482	chr10:13631295-13655482	0	+	13631295	13631295	8553170	8	68,158,144,146,143,82,75,105,	0,13621,15837,16789,17330,21112,23057,24082,
#Partially deleted in new
chr10	13631332	13648230	chr10:13631332-13648230	1	+	13631332	13631332	8553170	3	31,220,146,	0,13584,16752,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	13631337	13655436	chr10:13631337-13655436	0	+	13631337	13631337	8553170	7	26,266,124,223,158,75,59,	0,1222,6659,7363,13579,23015,24040,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	13631346	13644987	chr10:13631346-13644987	1	+	13631346	13631346	8553170	5	138,266,124,223,71,	0,1213,6650,7354,13570,
#Partially deleted in new
chr10	13631721	13654427	chr10:13631721-13654427	1	+	13631721	13631721	8553170	5	99,266,158,146,75,	0,838,13195,16363,22631,
#Partially deleted in new
chr10	13631767	13655482	chr10:13631767-13655482	2	+	13631767	13631767	8553170	4	206,266,75,105,	0,792,22585,23610,
#Partially deleted in new
chr10	13632679	13655482	chr10:13632679-13655482	0	+	13632679	13632679	8553170	6	146,158,146,82,75,105,	0,12237,15405,19728,21673,22698,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	13632771	13655482	chr10:13632771-13655482	0	+	13632771	13632771	8553170	7	54,220,146,143,37,75,105,	0,12145,15313,15854,20074,21581,22606,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	13636996	13644980	chr10:13636996-13644980	1	+	13636996	13636996	8553170	4	98,124,223,64,	0,1000,1704,7920,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	13637015	13655436	chr10:13637015-13655436	0	+	13637015	13637015	8553170	6	172,124,223,158,75,59,	0,981,1685,7901,17337,18362,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	13637854	13655482	chr10:13637854-13655482	0	+	13637854	13637854	8553170	6	266,121,128,158,75,105,	0,948,4173,7062,16498,17523,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	13638015	13655482	chr10:13638015-13655482	0	+	13638015	13638015	8553170	6	105,223,128,158,75,105,	0,685,4012,6901,16337,17362,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	13638645	13644563	chr10:13638645-13644563	0	+	13638645	13638645	8553170	1	5918,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	13638824	13645279	chr10:13638824-13645279	1	+	13638824	13638824	8553170	2	99,363,	0,6092,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	13641524	13655436	chr10:13641524-13655436	0	+	13641524	13641524	8553170	4	631,158,75,59,	0,3392,12828,13853,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	13643643	13653446	chr10:13643643-13653446	1	+	13643643	13643643	8553170	6	122,158,146,82,37,228,	0,1273,4441,8764,9202,9575,
#Partially deleted in new
chr10	13643705	14330884	chr10:13643705-14330884	3	-	13651904	14330102	789624	25	3330,72,97,887,168,238,57,229,123,134,142,139,77,87,58,66,84,23,57,85,93,95,66,126,288,	0,8197,10710,12930,15617,16610,19747,22391,26700,31205,50192,57634,63331,94138,96488,96806,104030,117941,118918,139216,152790,167108,215141,686352,686891,
#Partially deleted in new
chr10	13644223	13655436	chr10:13644223-13655436	0	+	13644223	13644223	8553170	3	851,75,59,	0,10129,11154,
#Partially deleted in new
chr10	13644575	13648773	chr10:13644575-13648773	0	+	13644575	13644575	8553170	3	499,146,148,	0,3509,4050,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	13644790	13655482	chr10:13644790-13655482	0	+	13644790	13644790	8553170	6	284,146,143,37,75,105,	0,3294,3835,8055,9562,10587,
#Partially deleted in new
chr10	13644915	13655425	chr10:13644915-13655425	0	+	13644915	13644915	8553170	6	159,166,144,146,75,48,	0,1699,2217,3169,9437,10462,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	13644916	13655482	chr10:13644916-13655482	0	+	13644916	13644916	8553170	7	158,146,143,82,84,75,105,	0,3168,3709,7491,7929,9436,10461,
#Partially deleted in new
chr10	13645007	13654401	chr10:13645007-13654401	0	+	13645007	13645007	8553170	7	129,72,144,146,143,82,49,	0,1607,2125,3077,3618,7400,9345,
#Partially deleted in new
chr10	13646271	13654526	chr10:13646271-13654526	0	-	13646271	13646271	8553170	2	764,111,	0,8144,
#Partially deleted in new
chr10	13646333	13657123	chr10:13646333-13657123	0	-	13646932	13657123	789624	3	702,97,488,	0,8082,10302,
#Partially deleted in new
chr10	13646343	13655482	chr10:13646343-13655482	0	+	13646343	13646343	8553170	5	343,144,146,75,105,	0,789,1741,8009,9034,
#Partially deleted in new
chr10	13646666	13652460	chr10:13646666-13652460	0	+	13646666	13646666	8553170	5	114,144,146,143,53,	0,466,1418,1959,5741,
#Partially deleted in new
chr10	13646669	13655796	chr10:13646669-13655796	0	+	13646669	13646669	8553170	4	607,146,75,419,	0,1415,7683,8708,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	13646769	13655482	chr10:13646769-13655482	0	+	13646769	13646769	8553170	7	507,146,149,82,37,244,105,	0,1315,1850,5638,6076,7414,8608,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	13646832	13655916	chr10:13646832-13655916	0	+	13646832	13646832	8553170	5	444,146,37,75,539,	0,1252,6013,7520,8545,
#Partially deleted in new
chr10	13646843	13655482	chr10:13646843-13655482	0	+	13646843	13646843	8553170	5	433,146,149,75,105,	0,1241,1776,7509,8534,
#Partially deleted in new
chr10	13646895	13654422	chr10:13646895-13654422	0	+	13646895	13646895	8553170	5	381,146,149,82,70,	0,1189,1724,5512,7457,
#Partially deleted in new
chr10	13646965	13655436	chr10:13646965-13655436	0	+	13646965	13646965	8553170	5	311,146,149,75,59,	0,1119,1654,7387,8412,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	13647116	13655482	chr10:13647116-13655482	0	+	13647116	13647116	8553170	6	160,146,149,37,244,105,	0,968,1503,5729,7067,8261,
#Partially deleted in new
chr10	13647552	13655482	chr10:13647552-13655482	0	+	13647552	13647552	8553170	3	678,75,105,	0,6800,7825,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	13647871	13655436	chr10:13647871-13655436	0	+	13647871	13647871	8553170	4	359,37,75,59,	0,4974,6481,7506,
#Partially deleted in new
chr10	13648183	13668445	chr10:13648183-13668445	0	+	13648183	13648183	8553170	3	47,184,739,	0,19210,19523,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	13648184	13655929	chr10:13648184-13655929	0	+	13648184	13648184	8553170	5	46,149,84,75,552,	0,435,4661,6168,7193,
#Partially deleted in new
chr10	13648204	13655925	chr10:13648204-13655925	0	+	13648204	13648204	8553170	2	26,548,	0,7173,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	13648763	13655910	chr10:13648763-13655910	0	+	13648763	13648763	8553170	5	5,82,37,75,533,	0,3644,4082,5589,6614,
#Partially deleted in new
chr10	13649227	13655436	chr10:13649227-13655436	0	+	13649227	13649227	8553170	3	107,75,59,	0,5125,6150,
#Partially deleted in new
chr10	13649246	13655432	chr10:13649246-13655432	0	+	13649246	13649246	8553170	3	391,75,55,	0,5106,6131,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	13649247	13655428	chr10:13649247-13655428	0	+	13649247	13649247	8553170	4	87,84,75,51,	0,3598,5105,6130,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	13649248	13655436	chr10:13649248-13655436	0	+	13649248	13649248	8553170	4	86,37,75,59,	0,3597,5104,6129,
#Partially deleted in new
chr10	13649263	13655485	chr10:13649263-13655485	0	+	13649263	13649263	8553170	4	71,82,244,108,	0,3144,4920,6114,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	13649277	13655436	chr10:13649277-13655436	0	+	13649277	13649277	8553170	6	57,57,82,37,75,59,	0,2092,3130,3568,5075,6100,
#Partially deleted in new
chr10	13649283	13655482	chr10:13649283-13655482	0	+	13649283	13649283	8553170	4	51,82,75,105,	0,3124,5069,6094,
#Partially deleted in new
chr10	13649289	13655436	chr10:13649289-13655436	0	+	13649289	13649289	8553170	5	45,57,82,75,59,	0,2080,3118,5063,6088,
#Partially deleted in new
chr10	13649292	13655433	chr10:13649292-13655433	0	+	13649292	13649292	8553170	4	345,82,75,56,	0,3115,5060,6085,
#Partially deleted in new
chr10	13649295	13655431	chr10:13649295-13655431	0	+	13649295	13649295	8553170	4	342,82,244,54,	0,3112,4888,6082,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	13649299	13655432	chr10:13649299-13655432	0	+	13649299	13649299	8553170	6	35,57,82,303,75,55,	0,2070,3108,3546,5053,6078,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	13649457	13655423	chr10:13649457-13655423	0	+	13649457	13649457	8553170	4	180,37,75,46,	0,3388,4895,5920,
#Partially deleted in new
chr10	13651065	13655433	chr10:13651065-13655433	0	+	13651065	13651065	8553170	5	361,82,170,75,56,	0,1342,3023,3287,4312,
#Partially deleted in new
chr10	13651368	13654414	chr10:13651368-13654414	0	+	13651368	13651368	8553170	2	58,62,	0,2984,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	13651425	13655436	chr10:13651425-13655436	0	+	13651425	13651425	8553170	4	529,82,75,59,	0,982,2927,3952,
#Partially deleted in new
chr10	13652051	13655476	chr10:13652051-13655476	0	+	13652051	13652051	8553170	3	438,75,99,	0,2301,3326,
#Deleted in new
chr10	13653824	13655929	chr10:13653824-13655929	0	+	13653824	13653824	8553170	2	603,552,	0,1553,
#Partially deleted in new
chr10	13666223	13972369	chr10:13666223-13972369	0	-	13666223	13971799	789624	17	102,123,134,142,139,77,87,58,66,84,23,57,85,93,95,66,714,	0,4182,8687,27674,35116,40813,71620,73970,74288,81512,95423,96400,116698,130272,144590,192623,305432,
#Partially deleted in new
chr10	13675037	13707536	chr10:13675037-13707536	0	-	13675037	13701387	789624	6	7,36,142,139,77,261,	0,18444,18860,26302,31999,32238,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	13675645	13675990	chr10:13675645-13675990	3	+	13675645	13675645	8553170	1	345,	0,
#Partially deleted in new
chr10	13684035	13707126	chr10:13684035-13707126	0	-	13684035	13684035	8553170	5	829,36,142,139,90,	0,9446,9862,17304,23001,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	13692168	13707757	chr10:13692168-13707757	0	-	13692168	13692168	8553170	3	1871,139,721,	0,9171,14868,
#Partially deleted in new
chr10	13693702	14008533	chr10:13693702-14008533	0	-	13693702	13693702	8553170	14	337,139,77,87,58,66,84,23,57,85,93,95,66,474,	0,7637,13334,44141,46491,46809,54033,67944,68921,89219,102793,117111,165144,314357,
#Partially deleted in new
chr10	13693982	13707567	chr10:13693982-13707567	0	-	13693982	13701387	789624	4	57,139,77,222,	0,7357,13054,13363,
#Partially deleted in new
chr10	13710414	13712054	chr10:13710414-13712054	3	+	13710414	13710414	8553170	2	240,133,	0,1507,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	13727795	13727916	chr10:13727795-13727916	7	+	13727795	13727795	16724991	1	121,	0,
#Partially deleted in new
chr10	13729382	13756200	chr10:13729382-13756200	3	+	13729382	13729382	8553170	3	130,179,165,	0,15130,26653,
#Partially deleted in new
chr10	13747735	13761669	chr10:13747735-13761669	0	-	13759472	13761669	8553170	3	84,342,23,	0,11429,13911,
#Partially deleted in new
chr10	13747735	13761669	chr10:13747735-13761669	0	-	13747735	13761669	8553170	3	84,45,23,	0,5320,13911,
#Partially deleted in new
chr10	13782928	14008533	chr10:13782928-14008533	0	-	13782928	14008152	789624	5	78,93,95,66,474,	0,13567,27885,75918,225131,
#Partially deleted in new
chr10	13858846	13892296	chr10:13858846-13892296	0	-	13858846	13858912	8553170	2	66,52,	0,33398,
#Partially deleted in new
chr10	13858846	13891729	chr10:13858846-13891729	0	-	13858846	13858912	8553170	2	66,106,	0,32777,
#Partially deleted in new
chr10	13858846	13866304	chr10:13858846-13866304	0	-	13858846	13858912	8553170	2	66,44,	0,7414,
#Partially deleted in new
chr10	13858846	13890658	chr10:13858846-13890658	0	-	13858846	13858912	8553170	2	66,180,	0,31632,
#Partially deleted in new
chr10	13858846	14174363	chr10:13858846-14174363	0	-	13858846	14174044	8553170	2	66,352,	0,315165,
#Partially deleted in new
chr10	13858846	14024481	chr10:13858846-14024481	0	-	13858846	14024419	8553170	2	66,128,	0,165507,
#Deleted in new
chr10	13870796	13871175	chr10:13870796-13871175	7	+	13870796	13870796	16724991	1	379,	0,
#Partially deleted in new
chr10	13991814	14007526	chr10:13991814-14007526	3	+	13991814	13991814	8553170	3	178,52,340,	0,11711,15372,
#Partially deleted in new
chr10	14024375	14174366	chr10:14024375-14174366	0	-	14024375	14024419	8553170	2	172,355,	0,149636,
#Partially deleted in new
chr10	14074283	14087605	chr10:14074283-14087605	3	+	14074283	14074283	789624	3	543,156,91,	0,9014,13231,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	14372000	14377586	chr10:14372000-14377586	3	+	14372000	14372000	8553170	3	155,964,1472,	0,698,4114,
#Partially deleted in new
chr10	14383199	14383277	chr10:14383199-14383277	3	-	14383199	14383199	5263520	1	78,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	14391874	14392196	chr10:14391874-14392196	3	+	14391874	14391874	8553170	1	322,	0,
#Deleted in new
chr10	14436575	14436661	chr10:14436575-14436661	3	+	14436575	14436575	5263520	1	86,	0,
#Partially deleted in new
chr10	14518556	14548670	chr10:14518556-14548670	1	-	14521189	14530459	789624	4	2750,151,184,231,	0,3312,11775,29883,
#Partially deleted in new
chr10	14518558	14572189	chr10:14518558-14572189	1	-	14521189	14530459	789624	4	2748,151,184,427,	0,3310,11773,53204,
#Partially deleted in new
chr10	14518559	14774897	chr10:14518559-14774897	3	-	14521189	14774663	789624	5	2747,151,184,58,645,	0,3309,11772,149074,255693,
#Partially deleted in new
chr10	14519158	14604389	chr10:14519158-14604389	1	-	14521189	14530459	789624	4	2148,151,184,150,	0,2710,11173,85081,
#Partially deleted in new
chr10	14519512	14604418	chr10:14519512-14604418	1	-	14521189	14530459	789624	5	1794,151,184,66,179,	0,2356,10819,33809,84727,
#Partially deleted in new
chr10	14519901	14774705	chr10:14519901-14774705	0	-	14553373	14774663	789624	6	1405,151,184,66,58,453,	0,1967,10430,33420,147732,254351,
#Partially deleted in new
chr10	14520794	14572128	chr10:14520794-14572128	1	-	14521189	14530459	789624	4	512,151,184,205,	0,1074,9537,51129,
#Partially deleted in new
chr10	14520850	14572189	chr10:14520850-14572189	1	-	14521189	14530459	789624	5	456,151,184,66,427,	0,1018,9481,32471,50912,
#Partially deleted in new
chr10	14521016	14556180	chr10:14521016-14556180	1	-	14521189	14530459	789624	4	290,151,184,165,	0,852,9315,34999,
#Partially deleted in new
chr10	14521072	14572113	chr10:14521072-14572113	1	-	14521189	14530459	789624	4	234,151,184,123,	0,796,9259,50918,
#Partially deleted in new
chr10	14521088	14548640	chr10:14521088-14548640	0	-	14528011	14530459	789624	5	218,151,103,184,201,	0,780,6848,9243,27351,
#Deleted in new
chr10	14521095	14522225	chr10:14521095-14522225	0	-	14521095	14521095	8553170	2	211,357,	0,773,
#Partially deleted in new
chr10	14521136	14556414	chr10:14521136-14556414	0	-	14521136	14521136	8553170	4	170,151,184,53,	0,732,9195,35225,
#Partially deleted in new
chr10	14521136	14554229	chr10:14521136-14554229	1	-	14521189	14530459	789624	5	170,151,184,66,126,	0,732,9195,32185,32967,
#Partially deleted in new
chr10	14521157	14572314	chr10:14521157-14572314	1	-	14521189	14530459	789624	4	149,151,184,86,	0,711,9174,51071,
#Partially deleted in new
chr10	14521193	14572339	chr10:14521193-14572339	0	-	14521193	14530459	789624	5	113,151,184,66,111,	0,675,9138,32128,51035,
#Partially deleted in new
chr10	14521200	14572155	chr10:14521200-14572155	0	-	14521200	14530459	789624	4	106,151,184,393,	0,668,9131,50562,
#Partially deleted in new
chr10	14521206	14532710	chr10:14521206-14532710	0	-	14521206	14530459	789624	4	100,151,184,124,	0,662,9125,11380,
#Partially deleted in new
chr10	14521211	14555885	chr10:14521211-14555885	0	-	14521211	14530459	789624	5	95,151,184,66,65,	0,657,9120,32110,34609,
#Partially deleted in new
chr10	14521280	14556171	chr10:14521280-14556171	0	-	14521280	14530459	789624	5	26,151,184,66,156,	0,588,9051,32041,34735,
#Partially deleted in new
chr10	14521868	14572030	chr10:14521868-14572030	0	-	14521868	14530459	789624	5	151,184,66,44,107,	0,8463,31453,34493,50055,
#Partially deleted in new
chr10	14521869	14553454	chr10:14521869-14553454	0	-	14521869	14521869	8553170	3	150,184,133,	0,8462,31452,
#Partially deleted in new
chr10	14521875	14612552	chr10:14521875-14612552	0	-	14521875	14530459	789624	4	144,184,66,64,	0,8456,31446,90613,
#Partially deleted in new
chr10	14521893	14572096	chr10:14521893-14572096	0	-	14521893	14530459	789624	4	126,184,66,173,	0,8438,31428,50030,
#Partially deleted in new
chr10	14521944	14572032	chr10:14521944-14572032	0	-	14521944	14530459	789624	5	75,184,108,66,42,	0,8387,20634,31377,50046,
#Partially deleted in new
chr10	14529527	14604295	chr10:14529527-14604295	0	-	14529527	14529527	8553170	3	659,184,56,	0,804,74712,
#Partially deleted in new
chr10	14529954	14571999	chr10:14529954-14571999	0	-	14529954	14529954	8553170	4	232,184,66,76,	0,377,23367,41969,
#Partially deleted in new
chr10	14534785	14572155	chr10:14534785-14572155	0	-	14534785	14534785	8553170	3	83,66,393,	0,18536,36977,
#Deleted in new
chr10	14602456	14604270	chr10:14602456-14604270	0	-	14602456	14602456	8553170	2	394,31,	0,1783,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	14652688	14660581	chr10:14652688-14660581	3	+	14652688	14652688	8553170	5	63,133,136,56,646,	0,1145,2341,3480,7247,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	14652741	14661691	chr10:14652741-14661691	0	+	14652741	14652741	8553170	3	92,133,132,	0,1092,8818,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	14663394	14663494	chr10:14663394-14663494	7	-	14663394	14663394	16724991	1	100,	0,
#Deleted in new
chr10	14723170	14724055	chr10:14723170-14724055	7	-	14723170	14723170	16724991	1	885,	0,
#Partially deleted in new
chr10	14819249	14838575	chr10:14819249-14838575	3	-	14819979	14825557	0	6	909,142,128,117,44,152,	0,6229,8895,14967,17001,19174,
#Partially deleted in new
chr10	14819530	14837922	chr10:14819530-14837922	0	-	14819530	14819530	8553170	4	628,128,44,91,	0,8614,16720,18301,
#Partially deleted in new
chr10	14819884	14828205	chr10:14819884-14828205	0	-	14819884	14819884	8553170	3	274,127,61,	0,5609,8260,
#Partially deleted in new
chr10	14819887	14836290	chr10:14819887-14836290	0	-	14819887	14819887	8553170	4	271,142,128,40,	0,5591,8257,16363,
#Partially deleted in new
chr10	14819979	14838072	chr10:14819979-14838072	0	-	14819982	14837946	0	4	179,142,128,241,	0,5499,8165,17852,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	14838159	14846998	chr10:14838159-14846998	3	+	14838402	14843581	789624	4	300,81,83,3628,	0,1745,1915,5211,
#Partially deleted in new
chr10	14838163	14871741	chr10:14838163-14871741	3	+	14838402	14871606	789624	14	296,81,83,49,106,91,105,162,156,103,213,174,71,214,	0,1741,1911,10445,10626,11557,13055,14206,15961,17677,28919,29572,32433,33364,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	14838165	14847018	chr10:14838165-14847018	1	+	14842284	14843894	789624	5	294,81,83,713,3648,	0,1739,1909,3968,5205,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	14838301	14844737	chr10:14838301-14844737	0	+	14838301	14838301	8553170	4	158,81,83,1367,	0,1603,1773,5069,
#Partially deleted in new
chr10	14838330	14842310	chr10:14838330-14842310	0	+	14842284	14842310	789624	5	129,81,83,75,201,	0,1574,1744,2835,3779,
#Partially deleted in new
chr10	14838436	14849668	chr10:14838436-14849668	0	+	14838436	14849476	789624	6	23,81,83,49,106,236,	0,1468,1638,10172,10353,10996,
#Partially deleted in new
chr10	14850714	14854207	chr10:14850714-14854207	0	+	14850714	14850714	8553170	3	609,162,83,	0,1655,3410,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	14877687	14878686	chr10:14877687-14878686	3	-	14877687	14877687	8553170	1	999,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	14878819	14904315	chr10:14878819-14904315	0	+	14878888	14896952	789624	5	100,672,147,130,1910,	0,18026,20719,22313,23586,
#Partially deleted in new
chr10	14878847	14902456	chr10:14878847-14902456	0	+	14896848	14902456	789624	6	113,146,132,147,130,51,	0,2652,17998,20691,22285,23558,
#Partially deleted in new
chr10	14878862	14903085	chr10:14878862-14903085	1	+	14878888	14902512	0	6	57,146,132,147,130,680,	0,2637,17983,20676,22270,23543,
#Partially deleted in new
chr10	14878888	14902512	chr10:14878888-14902512	1	+	14878888	14902512	0	6	31,146,672,147,130,107,	0,2611,17957,20650,22244,23517,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	14878899	14904315	chr10:14878899-14904315	3	+	14896848	14902512	0	5	228,672,147,130,1910,	0,17946,20639,22233,23506,
#Partially deleted in new
chr10	14878921	14897510	chr10:14878921-14897510	0	+	14896848	14897510	789624	2	39,665,	0,17924,
#Partially deleted in new
chr10	14879815	14897135	chr10:14879815-14897135	0	+	14896848	14897135	789624	3	252,146,290,	0,1684,17030,
#Partially deleted in new
chr10	14881499	14903593	chr10:14881499-14903593	0	+	14881499	14902512	789624	4	146,147,130,1188,	0,18039,19633,20906,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	14897358	14954432	chr10:14897358-14954432	1	-	14899163	14954010	0	14	1954,95,89,55,137,102,141,73,102,56,60,85,52,531,	0,22379,25622,29484,30657,35495,37021,37344,38104,39179,42451,47746,51677,56543,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	14907878	14954095	chr10:14907878-14954095	1	-	14908407	14939826	0	13	1452,95,89,55,137,102,141,73,102,60,85,52,194,	0,11859,15102,18964,20137,24975,26501,26824,27584,31931,37226,41157,46023,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	14908165	14954058	chr10:14908165-14954058	1	-	14908407	14939826	0	12	1165,95,89,55,137,102,141,73,102,60,52,157,	0,11572,14815,18677,19850,24688,26214,26537,27297,31644,40870,45736,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	14908170	14954048	chr10:14908170-14954048	1	-	14908407	14939826	0	12	1160,95,89,55,137,102,141,73,102,60,85,147,	0,11567,14810,18672,19845,24683,26209,26532,27292,31639,36934,45731,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr10	14908170	14954048	chr10:14908170-14954048	1	-	14908407	14936539	0	15	1160,95,89,55,137,102,141,73,102,56,60,85,131,52,147,	0,11567,14810,18672,19845,24683,26209,26532,27292,28367,31639,36934,37264,40865,45731,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr10	14908170	14954048	chr10:14908170-14954048	1	-	14908407	14936539	0	16	1160,95,89,55,137,102,141,73,102,56,60,322,85,131,52,147,	0,11567,14810,18672,19845,24683,26209,26532,27292,28367,31639,33943,36934,37264,40865,45731,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr10	14908170	14954072	chr10:14908170-14954072	1	-	14908407	14936539	0	15	1160,95,89,55,137,102,141,73,102,56,60,85,85,52,171,	0,11567,14810,18672,19845,24683,26209,26532,27292,28367,31639,36934,39354,40865,45731,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	14908170	14954048	chr10:14908170-14954048	3	-	14908407	14954010	0	14	1160,95,89,55,137,102,141,73,102,56,60,85,52,147,	0,11567,14810,18672,19845,24683,26209,26532,27292,28367,31639,36934,40865,45731,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr10	14908170	14954048	chr10:14908170-14954048	1	-	14908407	14936539	0	16	1160,95,89,55,137,102,141,73,102,56,60,322,85,85,52,147,	0,11567,14810,18672,19845,24683,26209,26532,27292,28367,31639,33943,36934,39354,40865,45731,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	14908187	14923675	chr10:14908187-14923675	1	-	14908407	14923000	789624	3	1143,95,695,	0,11550,14793,
#Partially deleted in new
chr10	14908741	14928082	chr10:14908741-14928082	0	-	14908741	14908741	8553170	6	589,95,65,89,55,67,	0,10996,11638,14239,18101,19274,
#Partially deleted in new
chr10	14909169	14911322	chr10:14909169-14911322	0	-	14909169	14909169	8553170	2	161,133,	0,2020,
#Partially deleted in new
chr10	14919795	14928062	chr10:14919795-14928062	0	-	14919795	14919795	8553170	3	37,89,47,	0,3185,8220,
#Partially deleted in new
chr10	14928142	14954031	chr10:14928142-14954031	0	-	14928142	14935488	789624	11	10,102,141,73,61,56,60,85,131,52,130,	0,4711,6237,6560,7320,8395,11667,16962,17292,20893,25759,
#Partially deleted in new
chr10	14959438	14972851	chr10:14959438-14972851	3	+	14966468	14972641	789624	3	119,167,339,	0,7001,13074,
#Partially deleted in new
chr10	14959438	14972851	chr10:14959438-14972851	0	+	14959438	14959438	8553170	2	119,339,	0,13074,
#Partially deleted in new
chr10	14959509	14972681	chr10:14959509-14972681	0	+	14959509	14959509	8553170	3	48,299,169,	0,10738,13003,
#Partially deleted in new
chr10	14966438	14972851	chr10:14966438-14972851	1	+	14966468	14972641	789624	2	168,339,	0,6074,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	14972554	14988050	chr10:14972554-14988050	0	+	14972554	14972554	5263520	3	66,219,263,	0,14241,15233,
#Deleted in new
chr10	14986941	14987515	chr10:14986941-14987515	7	-	14986941	14986941	16724991	1	574,	0,
#Deleted in new
chr10	14999049	15000055	chr10:14999049-15000055	7	-	14999049	14999049	16724991	1	1006,	0,
#Deleted in new
chr10	15007860	15008884	chr10:15007860-15008884	7	-	15007860	15007860	16724991	1	1024,	0,
#Partially deleted in new
chr10	15015369	15021863	chr10:15015369-15021863	7	-	15015369	15015369	16724991	5	102,141,65,102,60,	0,1534,1857,2681,6434,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	15032226	15065611	chr10:15032226-15065611	0	+	15047288	15065611	789624	6	124,195,131,139,100,28,	0,14899,17408,29497,32176,33357,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	15032252	15056950	chr10:15032252-15056950	0	+	15047288	15056950	789624	4	98,195,131,127,	0,14873,17382,24571,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	15043895	15073852	chr10:15043895-15073852	3	+	15047288	15073229	0	8	91,195,131,139,100,170,83,766,	0,3230,5739,17828,20507,21688,27899,29191,
#Partially deleted in new
chr10	15043926	15062084	chr10:15043926-15062084	0	+	15047288	15061911	789624	4	60,258,131,361,	0,3199,5708,17797,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	15043962	15073852	chr10:15043962-15073852	1	+	15047288	15073229	0	9	24,195,131,159,139,100,170,83,766,	0,3163,5672,12861,17761,20440,21621,27832,29124,
#Partially deleted in new
chr10	15065537	15073368	chr10:15065537-15073368	0	+	15065537	15065537	8553170	2	216,282,	0,7549,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	15077522	15088776	chr10:15077522-15088776	3	-	15078529	15088728	0	4	1081,63,118,60,	0,1168,1400,11194,
#Partially deleted in new
chr10	15078486	15088481	chr10:15078486-15088481	0	-	15078486	15078486	8553170	4	117,63,118,176,	0,204,436,9819,
#Deleted in new
chr10	15093262	15093611	chr10:15093262-15093611	7	-	15093262	15093262	16724991	1	349,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	15095384	15097319	chr10:15095384-15097319	3	-	15095384	15095384	8553170	2	1481,233,	0,1702,
#Partially deleted in new
chr10	15097179	15104254	chr10:15097179-15104254	3	+	15103314	15104166	789624	2	587,950,	0,6125,
#Partially deleted in new
chr10	15097236	15139818	chr10:15097236-15139818	0	+	15097236	15097236	8553170	3	162,101,60,	0,14449,42522,
#Partially deleted in new
chr10	15097330	15104255	chr10:15097330-15104255	1	+	15103314	15104166	789624	2	79,951,	0,5974,
#Partially deleted in new
chr10	15097419	15103820	chr10:15097419-15103820	0	+	15103314	15103820	789624	2	347,516,	0,5885,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	15102583	15109828	chr10:15102583-15109828	0	-	15102583	15102583	8553170	2	1100,127,	0,7118,
#Partially deleted in new
chr10	15106372	15119385	chr10:15106372-15119385	0	-	15106372	15106372	8553170	4	326,138,168,43,	0,3329,6423,12970,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	15107865	15168693	chr10:15107865-15168693	3	-	15109194	15168612	0	12	1350,138,168,171,109,171,117,92,119,145,136,191,	0,1836,4930,11477,20484,22276,24951,25187,25379,27408,33556,60637,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	15108293	15168628	chr10:15108293-15168628	1	-	15109194	15168530	789624	13	922,138,168,171,109,171,117,92,119,145,43,136,126,	0,1408,4502,11049,20056,21848,24523,24759,24951,26980,32693,33128,60209,
#Partially deleted in new
chr10	15132816	15141353	chr10:15132816-15141353	0	-	15132816	15132816	8553170	5	117,92,119,145,367,	0,236,428,2457,8170,
#Deleted in new
chr10	15154801	15155320	chr10:15154801-15155320	7	-	15154801	15154801	16724991	1	519,	0,
#Partially deleted in new
chr10	15171035	15171278	chr10:15171035-15171278	7	-	15171035	15171035	16724991	1	243,	0,
#Partially deleted in new
chr10	15211642	15371059	chr10:15211642-15371059	3	-	15212914	15371052	789624	8	2959,115,117,177,159,93,228,104,	0,4353,9301,36996,43078,64212,72235,159313,
#Partially deleted in new
chr10	15214170	15248707	chr10:15214170-15248707	0	-	15214170	15214170	8553170	3	431,117,69,	0,6773,34468,
#Partially deleted in new
chr10	15237491	15241767	chr10:15237491-15241767	3	+	15237491	15237491	8553170	2	173,621,	0,3655,
#Partially deleted in new
chr10	15248638	15371062	chr10:15248638-15371062	0	-	15248638	15371052	789624	4	177,93,228,107,	0,27216,35239,122317,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr10	15513948	15720125	chr10:15513948-15720125	3	-	15517157	15719771	789624	30	3296,123,102,114,129,159,106,81,80,93,148,68,138,155,56,108,46,192,206,53,57,44,45,126,46,62,124,101,134,563,	0,5341,17101,34506,44125,58262,61540,72635,78276,83258,90259,91775,92336,93728,94286,99711,102565,130081,132897,141405,145050,146930,157654,158675,163643,164773,170055,173989,204817,205614,
#Partially deleted in new
chr10	15596512	15604270	chr10:15596512-15604270	0	-	15596512	15596512	8553170	2	787,63,	0,7695,
#Partially deleted in new
chr10	15778169	15860520	chr10:15778169-15860520	3	-	15778991	15860299	789624	15	972,72,88,73,73,81,71,80,74,115,52,174,61,80,315,	0,3985,8391,11077,17930,38665,43486,55460,56373,59034,60058,63256,65042,69694,82036,
#Partially deleted in new
chr10	15778169	15818008	chr10:15778169-15818008	1	-	15778991	15796169	789624	6	972,72,88,73,73,1174,	0,3985,8391,11077,17930,38665,
#Partially deleted in new
chr10	15778169	15860498	chr10:15778169-15860498	0	-	15778169	15778169	8553170	14	972,72,88,73,73,81,71,80,74,115,174,61,80,293,	0,3985,8391,11077,17930,38665,43486,55460,56373,59034,63256,65042,69694,82036,
#Partially deleted in new
chr10	15778853	15782335	chr10:15778853-15782335	0	-	15778853	15778853	8553170	2	288,181,	0,3301,
#Partially deleted in new
chr10	15788827	15837299	chr10:15788827-15837299	0	-	15789245	15837299	789624	7	492,73,81,71,80,74,96,	0,7272,28007,32828,44802,45715,48376,
#Partially deleted in new
chr10	15796119	15838279	chr10:15796119-15838279	0	-	15796119	15837561	789624	8	53,81,71,80,74,115,92,52,	0,20715,25536,37510,38423,41084,41422,42108,
#Deleted in new
chr10	16005807	16005923	chr10:16005807-16005923	3	+	16005807	16005807	8553170	1	116,	0,
#Deleted in new
chr10	16071415	16071809	chr10:16071415-16071809	7	-	16071415	16071415	16724991	1	394,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	16207820	16207927	chr10:16207820-16207927	3	-	16207820	16207820	8553170	1	107,	0,
#Partially deleted in new
chr10	16278700	16295858	chr10:16278700-16295858	3	+	16278700	16278700	8553170	4	49,179,60,170,	0,5029,10141,16988,
#Partially deleted in new
chr10	16278700	16289048	chr10:16278700-16289048	1	+	16278700	16278700	8553170	3	49,179,207,	0,5029,10141,
#Partially deleted in new
chr10	16436942	16513745	chr10:16436942-16513745	1	+	16486366	16511256	789624	4	105,266,141,2700,	0,49409,68077,74103,
#Partially deleted in new
chr10	16436942	16511256	chr10:16436942-16511256	1	+	16484384	16511256	789624	5	105,480,266,141,211,	0,47394,49409,68077,74103,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	16436983	16513737	chr10:16436983-16513737	3	+	16484384	16511256	789624	6	64,134,480,266,141,2692,	0,373,47353,49368,68036,74062,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	16476002	16476164	chr10:16476002-16476164	3	+	16476002	16476002	8553170	1	162,	0,
#Partially deleted in new
chr10	16484334	16513745	chr10:16484334-16513745	1	+	16484384	16511256	789624	3	482,266,2700,	0,2017,26711,
#Deleted in new
chr10	16484690	16486792	chr10:16484690-16486792	0	+	16484690	16484690	8553170	2	126,441,	0,1661,
#Deleted in new
chr10	16513742	16522005	chr10:16513742-16522005	3	-	16514527	16521065	789624	2	965,1528,	0,6735,
#Deleted in new
chr10	16514466	16521145	chr10:16514466-16521145	1	-	16514527	16521065	789624	3	241,282,260,	0,6011,6419,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	16590610	16817528	chr10:16590610-16817528	3	-	16593393	16817081	789624	9	2886,133,115,83,119,121,51,112,214,	0,104412,161928,162307,164260,173779,191423,226362,226704,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	16590610	16817383	chr10:16590610-16817383	1	-	16593393	16817081	789624	8	2886,133,115,83,119,121,51,411,	0,104412,161928,162307,164260,173779,191423,226362,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	16590619	16817454	chr10:16590619-16817454	1	-	16593393	16782034	789624	8	2877,133,115,83,119,121,51,140,	0,104403,161919,162298,164251,173770,191414,226695,
#Partially deleted in new
chr10	16593152	16817413	chr10:16593152-16817413	0	-	16593152	16593152	8553170	8	344,133,127,115,83,119,121,99,	0,101870,133878,159386,159765,161718,171237,224162,
#Partially deleted in new
chr10	16593312	16817463	chr10:16593312-16817463	0	-	16593312	16593312	8553170	8	184,133,115,83,119,121,51,149,	0,101710,159226,159605,161558,171077,188721,224002,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	16721351	16748377	chr10:16721351-16748377	3	-	16721351	16721351	8553170	3	368,121,208,	0,1736,26818,
#Deleted in new
chr10	16767234	16767416	chr10:16767234-16767416	3	+	16767234	16767234	8553170	1	182,	0,
#Boundary problem: need 67, got 0, diff 67, mapped 0.0
chr10	16823965	17129817	chr10:16823965-17129817	3	-	16824974	17129765	0	67	1117,236,166,182,148,206,163,209,218,130,201,150,157,188,226,122,150,207,172,182,141,210,179,175,184,191,147,198,193,185,206,133,129,111,114,160,170,175,182,151,188,157,182,161,190,131,217,166,179,145,191,163,182,235,113,187,119,96,132,163,127,104,102,39,96,130,174,	0,4839,7286,11048,12269,16364,16919,27269,45670,50408,52931,64451,66405,75030,76659,77372,80000,82237,83542,89845,91066,91855,94656,95997,101275,101618,104191,109121,113626,114997,116066,123269,124512,126035,128310,130423,158518,160139,166368,195867,217067,219861,221041,221968,223448,241542,244098,244639,247460,247861,260305,261631,264198,276039,279159,280453,281491,285674,286953,290061,291505,298829,299622,302795,303863,305155,305678,
#Partially deleted in new
chr10	16840404	16866855	chr10:16840404-16866855	0	-	16840404	16840404	8553170	4	131,163,209,49,	0,480,10830,26402,
#Partially deleted in new
chr10	16900826	16907746	chr10:16900826-16907746	0	-	16900826	16900826	8553170	5	24,122,150,207,67,	0,511,3139,5376,6853,
#Partially deleted in new
chr10	16901372	16907748	chr10:16901372-16907748	0	-	16901372	16901372	8553170	4	87,150,207,241,	0,2593,4830,6135,
#Partially deleted in new
chr10	16965639	16984195	chr10:16965639-16984195	0	-	16965639	16965639	8553170	3	338,170,91,	0,16844,18465,
#Partially deleted in new
chr10	17121881	17127837	chr10:17121881-17127837	0	-	17122521	17127837	789624	5	704,104,102,39,9,	0,913,1706,4879,5947,
#Partially deleted in new
chr10	17123410	17129804	chr10:17123410-17129804	0	-	17123410	17123410	8553170	5	279,39,96,130,161,	0,3350,4418,5710,6233,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	17137335	17137585	chr10:17137335-17137585	3	-	17137335	17137335	8553170	1	250,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	17142253	17201672	chr10:17142253-17201672	0	-	17169503	17201634	789624	12	6887,130,58,344,84,70,66,72,77,230,110,102,	0,11253,12423,15187,16892,18051,19229,19912,26587,27056,32297,59317,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	17146736	17201682	chr10:17146736-17201682	3	-	17149039	17201634	0	11	2404,130,58,344,84,70,66,72,77,110,112,	0,6770,7940,10704,12409,13568,14746,15429,22104,27814,54834,
#Partially deleted in new
chr10	17148915	17201851	chr10:17148915-17201851	0	-	17162219	17201634	0	9	225,130,58,344,84,70,72,110,281,	0,4591,5761,8525,10230,11389,13250,25635,52655,
#Partially deleted in new
chr10	17151413	17169419	chr10:17151413-17169419	0	-	17151413	17151413	8553170	10	686,130,58,344,84,70,66,72,77,110,	0,2093,3263,6027,7732,8891,10069,10752,17427,17896,
#Partially deleted in new
chr10	17152934	17201657	chr10:17152934-17201657	1	-	17153447	17201634	789624	5	702,58,344,110,87,	0,1742,4506,21616,48636,
#Partially deleted in new
chr10	17157443	17174660	chr10:17157443-17174660	0	-	17157443	17174660	789624	5	341,84,70,77,110,	0,1702,2861,11397,17107,
#Partially deleted in new
chr10	17159152	17201580	chr10:17159152-17201580	0	-	17161506	17201580	789624	5	77,70,66,110,10,	0,1152,2330,15398,42418,
#Partially deleted in new
chr10	17159152	17174660	chr10:17159152-17174660	0	-	17159152	17174660	789624	3	77,70,110,	0,1152,15398,
#Partially deleted in new
chr10	17159152	17201580	chr10:17159152-17201580	0	-	17159152	17201580	789624	6	77,70,66,77,110,10,	0,1152,2330,9688,15398,42418,
#Partially deleted in new
chr10	17171555	17201428	chr10:17171555-17201428	0	-	17171555	17171555	8553170	3	469,110,148,	0,2995,29725,
#Partially deleted in new
chr10	17171819	17200567	chr10:17171819-17200567	0	-	17171819	17171819	8553170	3	205,110,48,	0,2731,28700,
#Partially deleted in new
chr10	17171907	17202054	chr10:17171907-17202054	0	-	17171907	17171907	8553170	3	117,110,484,	0,2643,29663,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	17214238	17226898	chr10:17214238-17226898	1	-	17214238	17214238	789624	4	1126,108,74,43,	0,1928,3363,12617,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	17215195	17229985	chr10:17215195-17229985	3	-	17215195	17215195	789624	3	169,108,641,	0,971,14149,
#Partially deleted in new
chr10	17228258	17237592	chr10:17228258-17237592	2	+	17229422	17237271	0	10	266,710,61,96,162,126,221,44,86,363,	0,1017,2391,5328,5511,6434,6910,7587,8035,8971,
#Deleted in new
chr10	17228514	17229870	chr10:17228514-17229870	0	+	17229422	17229870	789624	2	162,595,	0,761,
#Deleted in new
chr10	17228868	17229750	chr10:17228868-17229750	0	+	17229422	17229750	789624	2	159,475,	0,407,
#Partially deleted in new
chr10	17229277	17237593	chr10:17229277-17237593	1	+	17229422	17237271	0	9	708,61,96,162,126,221,44,86,364,	0,1372,4309,4492,5415,5891,6568,7016,7952,
#Partially deleted in new
chr10	17229277	17237593	chr10:17229277-17237593	0	+	17229422	17235912	789624	8	708,61,96,162,126,221,534,364,	0,1372,4309,4492,5415,5891,6568,7952,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	17229290	17231093	chr10:17229290-17231093	0	+	17229290	17229290	8553170	2	695,444,	0,1359,
#Partially deleted in new
chr10	17230003	17237593	chr10:17230003-17237593	0	+	17230632	17235393	789624	6	707,96,162,126,1211,364,	0,3583,3766,4689,5165,7226,
#Partially deleted in new
chr10	17230608	17235085	chr10:17230608-17235085	0	+	17230608	17230608	8553170	4	102,96,162,393,	0,2978,3161,4084,
#Partially deleted in new
chr10	17230653	17234124	chr10:17230653-17234124	0	+	17230653	17230653	8553170	3	57,96,355,	0,2933,3116,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	17233224	17235034	chr10:17233224-17235034	0	+	17233224	17233224	8553170	3	458,162,342,	0,545,1468,
#Partially deleted in new
chr10	17233324	17234833	chr10:17233324-17234833	3	-	17233324	17233324	8553170	2	574,132,	0,1377,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	17318382	17327109	chr10:17318382-17327109	0	-	17318694	17327109	789624	4	351,157,93,96,	0,2807,4682,8631,
#Partially deleted in new
chr10	17319873	17454330	chr10:17319873-17454330	3	-	17320877	17454255	789624	8	1473,93,113,145,87,90,99,176,	0,3191,7140,11534,39640,70657,133685,134281,
#Partially deleted in new
chr10	17320345	17454196	chr10:17320345-17454196	0	-	17379388	17454196	8553170	9	1001,93,113,145,87,69,90,99,42,	0,2719,6668,11062,39168,59011,70185,133213,133809,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	17386935	17408286	chr10:17386935-17408286	0	+	17386935	17386935	789624	3	140,98,319,	0,12169,21032,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	17386950	17410631	chr10:17386950-17410631	3	+	17386950	17386950	8553170	4	125,98,277,1311,	0,12154,21017,22370,
#Partially deleted in new
chr10	17386993	17408286	chr10:17386993-17408286	0	+	17386993	17386993	8553170	3	82,98,224,	0,12111,21069,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	17403507	17403620	chr10:17403507-17403620	3	+	17403507	17403507	8553170	1	113,	0,
#Partially deleted in new
chr10	17408026	17413503	chr10:17408026-17413503	0	+	17408026	17408026	8553170	2	218,154,	0,5323,
#Deleted in new
chr10	17577361	17578212	chr10:17577361-17578212	7	+	17577361	17577361	16724991	1	851,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	17589031	17617377	chr10:17589031-17617377	3	-	17590363	17617339	789624	7	1415,179,122,89,19,118,295,	0,5173,10258,14528,14694,14898,28051,
#Partially deleted in new
chr10	17590274	17603744	chr10:17590274-17603744	0	-	17594377	17603744	789624	4	172,179,89,19,	0,3930,13285,13451,
#Partially deleted in new
chr10	17594208	17603828	chr10:17594208-17603828	0	-	17594208	17594208	8553170	3	175,122,269,	0,5081,9351,
#Partially deleted in new
chr10	17599073	17617235	chr10:17599073-17617235	0	-	17599267	17617235	789624	5	338,89,19,118,153,	0,4486,4652,4856,18009,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	17602905	17617374	chr10:17602905-17617374	0	-	17602905	17602905	8553170	2	1142,292,	0,14177,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	17615476	17617367	chr10:17615476-17617367	1	-	17615744	17617339	789624	2	488,285,	0,1606,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	17641283	17643878	chr10:17641283-17643878	3	-	17641283	17641283	789624	1	2595,	0,
#Partially deleted in new
chr10	17644124	17715914	chr10:17644124-17715914	3	+	17644339	17714780	0	14	255,85,76,96,147,91,193,95,89,88,55,154,176,1372,	0,16339,40550,40707,43902,49097,50924,52650,56066,60306,60845,61463,64651,70418,
#Partially deleted in new
chr10	17644207	17700221	chr10:17644207-17700221	0	+	17688062	17700221	789624	6	172,147,91,193,95,31,	0,43819,49014,50841,52567,55983,
#Partially deleted in new
chr10	17644207	17693281	chr10:17644207-17693281	0	+	17644339	17672978	789624	7	172,85,104,76,96,147,60,	0,16256,28767,40467,40624,43819,49014,
#Partially deleted in new
chr10	17684784	17688157	chr10:17684784-17688157	0	+	17684784	17684784	8553170	2	143,131,	0,3242,
#Partially deleted in new
chr10	17694925	17700241	chr10:17694925-17700241	0	+	17694925	17694925	8553170	3	316,95,51,	0,1849,5265,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	17695708	17700232	chr10:17695708-17700232	3	-	17695708	17695708	8553170	3	412,101,44,	0,894,4480,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	17752251	17800868	chr10:17752251-17800868	3	+	17752295	17796504	789624	4	301,73,142,4948,	0,19057,23777,43669,
#Partially deleted in new
chr10	17809343	17911170	chr10:17809343-17911170	3	+	17809465	17910465	0	30	183,402,174,165,114,147,186,158,111,116,149,200,128,88,145,42,164,68,101,146,115,167,103,233,166,150,114,165,42,956,	0,13730,18198,24331,31349,35945,40235,43623,46898,52043,54190,57218,60902,61504,62638,64440,65746,68556,70377,71181,71723,75925,84866,88690,91444,92629,97542,98190,99962,100871,
#Deleted in new
chr10	17845106	17845193	chr10:17845106-17845193	3	+	17845106	17845106	5263520	1	87,	0,
#Partially deleted in new
chr10	17862886	17865471	chr10:17862886-17865471	3	-	17862886	17862886	8553170	2	162,59,	0,2526,
#Partially deleted in new
chr10	17951838	18043292	chr10:17951838-18043292	1	+	17953276	18042833	789624	13	187,347,282,208,173,172,173,153,111,67,159,188,588,	0,1352,9742,13644,26063,29473,35640,39312,41342,43817,48828,51332,90866,
#Partially deleted in new
chr10	17951838	18043292	chr10:17951838-18043292	1	+	17961721	18042833	789624	12	187,282,208,173,172,173,153,111,67,159,188,588,	0,9742,13644,26063,29473,35640,39312,41342,43817,48828,51332,90866,
#Partially deleted in new
chr10	17951891	18043287	chr10:17951891-18043287	3	+	17953276	18042833	789624	12	134,347,282,208,173,172,173,153,67,159,188,583,	0,1299,9689,13591,26010,29420,35587,39259,43764,48775,51279,90813,
#Partially deleted in new
chr10	17951913	18043287	chr10:17951913-18043287	1	+	17953276	18042833	789624	13	112,347,282,208,173,172,173,153,108,67,159,188,583,	0,1277,9667,13569,25988,29398,35565,39237,41270,43742,48753,51257,90791,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	18001785	18010562	chr10:18001785-18010562	3	-	18001785	18001785	789624	5	1611,98,134,89,34,	0,2525,6764,7879,8743,
#Partially deleted in new
chr10	18003103	18007270	chr10:18003103-18007270	1	-	18003103	18003103	8553170	4	293,98,473,142,	0,1207,2260,4025,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	18140676	18543557	chr10:18140676-18543557	1	+	18140736	18539724	789624	14	180,93,120,123,137,77,134,81,59,110,152,96,186,4328,	0,10206,261247,357678,360135,365794,373559,377659,378233,386911,393399,395424,397503,398553,
#Partially deleted in new
chr10	18140736	18539724	chr10:18140736-18539724	1	+	18140736	18539724	789624	14	120,93,120,123,137,77,62,81,59,110,152,96,186,495,	0,10146,261187,357618,360075,365734,374243,377599,378173,386851,393339,395364,397443,398493,
#Partially deleted in new
chr10	18140736	18539724	chr10:18140736-18539724	1	+	18140736	18539724	789624	7	120,93,120,123,96,186,495,	0,10146,261187,357618,395364,397443,398493,
#Partially deleted in new
chr10	18140746	18151269	chr10:18140746-18151269	0	+	18140746	18140746	8553170	2	110,387,	0,10136,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	18140791	18182107	chr10:18140791-18182107	0	+	18140791	18140791	8553170	3	65,93,301,	0,10091,41015,
#Partially deleted in new
chr10	18140812	18539669	chr10:18140812-18539669	0	+	18141179	18539669	789624	14	403,93,120,123,137,77,20,81,59,110,152,96,186,440,	0,10070,261111,357542,359999,365658,373698,377523,378097,386775,393263,395288,397367,398417,
#Partially deleted in new
chr10	18140812	18539724	chr10:18140812-18539724	1	+	18141179	18539724	789624	14	403,93,120,123,137,77,62,81,59,110,152,96,186,495,	0,10070,261111,357542,359999,365658,374167,377523,378097,386775,393263,395288,397367,398417,
#Partially deleted in new
chr10	18140880	18527663	chr10:18140880-18527663	0	+	18141179	18518390	789624	11	335,93,120,123,137,77,20,62,81,59,76,	0,10002,261043,357474,359931,365590,373630,374099,377455,378029,386707,
#Partially deleted in new
chr10	18140957	18540763	chr10:18140957-18540763	3	+	18141179	18539724	789624	14	258,93,120,123,137,77,134,81,59,110,152,96,186,1534,	0,9925,260966,357397,359854,365513,373278,377378,377952,386630,393118,395143,397222,398272,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	18206126	18261192	chr10:18206126-18261192	0	-	18206126	18206126	8553170	2	668,27,	0,55039,
#Partially deleted in new
chr10	18234167	18261194	chr10:18234167-18261194	3	-	18234167	18234167	8553170	3	92,127,29,	0,4226,26998,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	18256578	18261192	chr10:18256578-18261192	0	-	18256578	18256578	8553170	2	742,27,	0,4587,
#Deleted in new
chr10	18260399	18261192	chr10:18260399-18261192	0	-	18260399	18260399	8553170	1	793,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	18260768	18541869	chr10:18260768-18541869	1	+	18261269	18539724	789624	13	549,120,123,137,77,134,81,59,110,152,96,186,2640,	0,141155,237586,240043,245702,253467,257567,258141,266819,273307,275332,277411,278461,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	18260768	18541862	chr10:18260768-18541862	1	+	18261269	18539724	789624	6	549,120,123,96,186,2633,	0,141155,237586,275332,277411,278461,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	18260768	18541862	chr10:18260768-18541862	1	+	18261269	18539724	789624	13	549,120,123,137,77,62,81,59,110,152,96,186,2633,	0,141155,237586,240043,245702,254211,257567,258141,266819,273307,275332,277411,278461,
#Partially deleted in new
chr10	18261079	18539731	chr10:18261079-18539731	1	+	18261269	18539724	789624	13	238,120,123,137,77,20,81,59,110,152,96,186,502,	0,140844,237275,239732,245391,253431,257256,257830,266508,272996,275021,277100,278150,
#Partially deleted in new
chr10	18340684	18541109	chr10:18340684-18541109	1	+	18340926	18539724	789624	13	293,120,123,137,77,134,81,59,110,152,96,186,1880,	0,61239,157670,160127,165786,173551,177651,178225,186903,193391,195416,197495,198545,
#Partially deleted in new
chr10	18340716	18498793	chr10:18340716-18498793	0	+	18340716	18340716	8553170	3	261,120,439,	0,61207,157638,
#Partially deleted in new
chr10	18340921	18539730	chr10:18340921-18539730	1	+	18401963	18539724	789624	3	56,74,467,	0,61002,198342,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	18340926	18541862	chr10:18340926-18541862	1	+	18340926	18518358	789624	12	51,120,123,137,77,81,59,110,152,96,186,2633,	0,60997,157428,159885,165544,177409,177983,186661,193149,195174,197253,198303,
#Partially deleted in new
chr10	18400574	18539724	chr10:18400574-18539724	1	+	18401031	18539724	789624	13	526,120,123,137,77,134,81,59,110,152,96,186,495,	0,1349,97780,100237,105896,113661,117761,118335,127013,133501,135526,137605,138655,
#Partially deleted in new
chr10	18400686	18520075	chr10:18400686-18520075	0	+	18400686	18400686	8553170	9	414,120,123,137,77,20,81,59,359,	0,1237,97668,100125,105784,113824,117649,118223,119030,
#Partially deleted in new
chr10	18400808	18518925	chr10:18400808-18518925	0	+	18401031	18518925	789624	8	292,120,123,137,77,20,81,16,	0,1115,97546,100003,105662,113702,117527,118101,
#Partially deleted in new
chr10	18401022	18539791	chr10:18401022-18539791	1	+	18401031	18539724	789624	13	78,120,123,137,77,20,81,59,110,152,96,186,562,	0,901,97332,99789,105448,113488,117313,117887,126565,133053,135078,137157,138207,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	18531848	18533336	chr10:18531848-18533336	3	-	18531848	18531848	8553170	2	113,300,	0,1188,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	18541585	18544387	chr10:18541585-18544387	1	-	18541585	18541585	8553170	2	592,64,	0,2738,
#Partially deleted in new
chr10	18545560	18651622	chr10:18545560-18651622	3	-	18545932	18651203	0	11	585,126,149,145,120,82,154,110,80,156,494,	0,2551,6262,40388,50647,64284,68899,70623,96915,102929,105568,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	18546061	18551822	chr10:18546061-18551822	0	-	18546061	18546061	8553170	3	84,126,105,	0,2050,5656,
#Partially deleted in new
chr10	18614551	18655194	chr10:18614551-18655194	0	-	18614551	18655063	789624	5	62,110,80,156,170,	0,1632,27924,33938,40473,
#Partially deleted in new
chr10	18651265	18659267	chr10:18651265-18659267	0	-	18651265	18651265	8553170	3	205,151,36,	0,3759,7966,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	18653283	18659285	chr10:18653283-18659285	0	-	18654955	18655063	789624	3	176,323,54,	0,1569,5948,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	18654550	18659256	chr10:18654550-18659256	0	-	18654550	18654550	8553170	2	625,64,	0,4642,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	18654687	18659267	chr10:18654687-18659267	0	-	18654687	18654687	8553170	2	488,36,	0,4544,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	18654863	18659238	chr10:18654863-18659238	0	-	18654863	18654863	8553170	3	312,279,46,	0,3355,4329,
#Partially deleted in new
chr10	18659404	18681639	chr10:18659404-18681639	3	+	18659637	18675216	0	6	279,61,148,84,152,6472,	0,7170,9125,13217,14579,15763,
#Partially deleted in new
chr10	18735744	18738631	chr10:18735744-18738631	7	+	18735744	18735744	16724991	2	541,1300,	0,1587,
#Partially deleted in new
chr10	18746432	18747853	chr10:18746432-18747853	3	+	18746432	18746432	8553170	2	359,189,	0,1232,
#Deleted in new
chr10	18940500	18940953	chr10:18940500-18940953	7	+	18940500	18940500	16724991	1	453,	0,
#Partially deleted in new
chr10	19048770	19734478	chr10:19048770-19734478	3	+	19048938	19734237	789624	40	367,141,95,162,97,102,147,167,93,208,147,98,174,121,153,106,368,413,88,177,163,157,111,214,248,292,246,158,184,129,162,158,202,264,126,67,80,97,76,322,	0,17948,39069,39253,55208,74721,75753,79450,85085,87803,97427,106304,116866,126437,154957,155537,156127,160497,208913,231276,234248,275178,278792,282598,299000,303235,338757,340681,401536,442746,449714,482423,518731,546423,559006,567086,643511,643687,681935,685386,
#Partially deleted in new
chr10	19051454	19052170	chr10:19051454-19052170	7	+	19051454	19051454	16724991	2	183,215,	0,501,
#Partially deleted in new
chr10	19203849	19734237	chr10:19203849-19734237	0	+	19203849	19734237	789624	25	31,106,368,413,88,177,163,157,111,214,248,292,246,180,158,214,129,162,158,202,264,126,97,76,81,	0,458,1048,5418,53834,76197,79169,120099,123713,127519,143921,148156,183678,185333,185602,285110,287667,294635,327344,363652,391344,403927,488608,526856,530307,
#Deleted in new
chr10	19290222	19291480	chr10:19290222-19291480	3	-	19290222	19290222	8553170	2	244,59,	0,1199,
#Partially deleted in new
chr10	19489093	19734476	chr10:19489093-19734476	0	+	19489093	19734237	789624	12	80,129,162,158,202,264,126,67,80,97,76,320,	0,2423,9391,42100,78408,106100,118683,126763,203188,203364,241612,245063,
#Deleted in new
chr10	19489100	19489400	chr10:19489100-19489400	7	+	19489100	19489100	16724991	1	300,	0,
#Deleted in new
chr10	19491071	19491299	chr10:19491071-19491299	7	-	19491071	19491071	16724991	1	228,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	19598246	19598463	chr10:19598246-19598463	3	+	19598246	19598246	8553170	1	217,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	19633682	19633812	chr10:19633682-19633812	7	-	19633682	19633682	16724991	1	130,	0,
#Partially deleted in new
chr10	19692309	19790401	chr10:19692309-19790401	0	+	19692309	19692309	8553170	3	52,97,265,	0,148,97827,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	19721977	19728550	chr10:19721977-19728550	1	-	19721977	19721977	8553170	4	248,259,55,146,	0,352,2949,6427,
#Partially deleted in new
chr10	19730573	19734478	chr10:19730573-19734478	0	+	19730573	19734272	789624	2	85,322,	0,3583,
#Deleted in new
chr10	19747171	19747435	chr10:19747171-19747435	7	-	19747171	19747171	16724991	1	264,	0,
#Deleted in new
chr10	19747822	19748621	chr10:19747822-19748621	7	+	19747822	19747822	16724991	1	799,	0,
#Deleted in new
chr10	19792997	19793101	chr10:19792997-19793101	3	-	19792997	19792997	8553170	1	104,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	19812371	19816278	chr10:19812371-19816278	3	-	19812371	19812371	8553170	2	472,1877,	0,2030,
#Partially deleted in new
chr10	19816238	20280357	chr10:19816238-20280357	1	+	19817079	20279819	789624	13	953,212,70,123,119,100,96,82,61,151,39,161,655,	0,185536,251931,327056,331545,348229,360760,361089,395430,401187,402825,429106,463464,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	19816238	20289856	chr10:19816238-20289856	3	+	19817079	20279819	789624	14	953,212,147,70,123,119,100,96,82,61,151,39,161,10154,	0,185536,230630,251931,327056,331545,348229,360760,361089,395430,401187,402825,429106,463464,
#Partially deleted in new
chr10	20043319	20280357	chr10:20043319-20280357	0	+	20043319	20043319	8553170	13	99,147,70,123,119,100,96,82,61,151,39,161,655,	0,3549,24850,99975,104464,121148,133679,134008,168349,174106,175744,202025,236383,
#Partially deleted in new
chr10	20070804	20091784	chr10:20070804-20091784	3	-	20070804	20070804	8553170	2	448,51,	0,20929,
#Deleted in new
chr10	20350048	20351100	chr10:20350048-20351100	7	+	20350048	20350048	16724991	2	79,843,	0,209,
#Deleted in new
chr10	20547170	20547422	chr10:20547170-20547422	7	+	20547170	20547170	16724991	1	252,	0,
#Deleted in new
chr10	20551969	20552046	chr10:20551969-20552046	3	+	20551969	20551969	5263520	1	77,	0,
#Partially deleted in new
chr10	20779972	20897602	chr10:20779972-20897602	1	-	20785746	20897205	0	28	5951,107,150,93,172,105,93,93,93,93,93,105,111,111,111,111,111,108,105,105,114,102,102,111,111,105,72,478,	0,7229,28537,29833,32796,33966,35652,37627,39451,43235,46474,48557,51223,51500,55540,60766,65285,70422,72572,78267,79740,88691,89767,100821,108124,109872,116985,117152,
#Partially deleted in new
chr10	20783905	21174187	chr10:20783905-21174187	3	-	20785746	21173833	0	7	2018,107,172,108,85,95,423,	0,3296,28863,177766,236211,388477,389859,
#Deleted in new
chr10	20804292	20804577	chr10:20804292-20804577	7	+	20804292	20804292	16724991	1	285,	0,
#Partially deleted in new
chr10	20809866	20835561	chr10:20809866-20835561	0	-	20809866	20809866	8553170	12	32,172,105,93,93,813,93,93,105,111,111,49,	0,2902,4072,5758,7733,8837,13341,16580,18663,21329,21606,25646,
#Partially deleted in new
chr10	20813739	20826471	chr10:20813739-20826471	0	-	20815677	20826471	789624	6	304,93,95,93,93,25,	0,1885,3858,5684,9468,12707,
#Partially deleted in new
chr10	20813739	20817650	chr10:20813739-20817650	0	-	20813902	20817650	789624	3	304,93,51,	0,1885,3860,
#Partially deleted in new
chr10	20813739	20819480	chr10:20813739-20819480	0	-	20817688	20819480	789624	5	304,93,95,131,57,	0,1885,3858,4964,5684,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	20813739	20815825	chr10:20813739-20815825	0	-	20813739	20813739	8553170	2	304,201,	0,1885,
#Deleted in new
chr10	20831145	20831583	chr10:20831145-20831583	0	-	20831145	20831145	8553170	2	161,111,	0,327,
#Partially deleted in new
chr10	20835512	20845495	chr10:20835512-20845495	0	-	20835512	20835512	8553170	3	111,111,238,	0,5226,9745,
#Deleted in new
chr10	20841374	20841560	chr10:20841374-20841560	7	+	20841374	20841374	16724991	1	186,	0,
#Partially deleted in new
chr10	20867758	20897215	chr10:20867758-20897215	0	-	20867758	20867758	8553170	7	1007,102,111,111,105,72,91,	0,1981,13035,20338,22086,29199,29366,
#Partially deleted in new
chr10	20880873	20899691	chr10:20880873-20899691	0	-	20880873	20899410	789624	5	31,111,105,72,314,	0,7223,8971,16084,18504,
#Deleted in new
chr10	21028998	21030792	chr10:21028998-21030792	7	+	21028998	21028998	16724991	1	1794,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	21110681	21113388	chr10:21110681-21113388	7	+	21110681	21110681	16724991	2	226,602,	0,2105,
#Partially deleted in new
chr10	21125762	21146559	chr10:21125762-21146559	0	-	21125762	21125762	8553170	2	396,218,	0,20579,
#Partially deleted in new
chr10	21125762	21146559	chr10:21125762-21146559	0	-	21125762	21125762	8553170	2	361,218,	0,20579,
#Partially deleted in new
chr10	21125763	21146559	chr10:21125763-21146559	3	-	21125822	21146508	789624	2	360,218,	0,20578,
#Partially deleted in new
chr10	21126085	21146508	chr10:21126085-21146508	1	-	21126085	21146508	789624	2	73,167,	0,20256,
#Partially deleted in new
chr10	21170261	21172452	chr10:21170261-21172452	0	-	21170261	21170261	8553170	2	466,70,	0,2121,
#Deleted in new
chr10	21171546	21173838	chr10:21171546-21173838	0	-	21171546	21171546	8553170	2	931,74,	0,2218,
#Deleted in new
chr10	21174013	21175048	chr10:21174013-21175048	3	+	21174013	21174013	789624	2	94,567,	0,468,
#Deleted in new
chr10	21174353	21174923	chr10:21174353-21174923	0	+	21174353	21174353	8553170	2	20,442,	0,128,
#Partially deleted in new
chr10	21217890	21218279	chr10:21217890-21218279	7	+	21217890	21217890	16724991	1	389,	0,
#Deleted in new
chr10	21247751	21248095	chr10:21247751-21248095	7	+	21247751	21247751	16724991	1	344,	0,
#Partially deleted in new
chr10	21340232	21372950	chr10:21340232-21372950	3	-	21340232	21340232	789624	5	81,94,59,149,56,	0,14438,28264,29734,32662,
#Partially deleted in new
chr10	21394032	21394592	chr10:21394032-21394592	7	+	21394032	21394032	16724991	1	560,	0,
#Deleted in new
chr10	21452196	21452412	chr10:21452196-21452412	7	+	21452196	21452196	16724991	1	216,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	21455235	21455515	chr10:21455235-21455515	3	-	21455235	21455235	8553170	1	280,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	21481715	21481817	chr10:21481715-21481817	3	+	21481715	21481715	8553170	1	102,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	21492657	21497262	chr10:21492657-21497262	3	-	21495599	21496814	789624	2	3288,513,	0,4092,
#Deleted in new
chr10	21496561	21496641	chr10:21496561-21496641	3	-	21496561	21496561	5263520	1	80,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	21513477	21525682	chr10:21513477-21525682	3	-	21515095	21517822	789624	4	6181,92,189,136,	0,7911,10205,12069,
#Deleted in new
chr10	21515015	21517919	chr10:21515015-21517919	1	-	21515095	21517822	789624	2	1901,766,	0,2138,
#Deleted in new
chr10	21518565	21526368	chr10:21518565-21526368	0	-	21518565	21518565	8553170	4	1093,92,189,78,	0,2823,5117,7725,
#Deleted in new
chr10	21519507	21523895	chr10:21519507-21523895	0	-	21519507	21519507	8553170	3	151,92,213,	0,1881,4175,
#Partially deleted in new
chr10	21524674	21743630	chr10:21524674-21743630	1	+	21534644	21741983	0	23	101,160,80,55,110,104,94,96,96,256,570,45,33,179,112,73,155,189,89,362,97,207,1692,	0,9970,14158,61619,70656,87673,90156,92437,126998,145774,148675,156657,157550,189097,201569,203181,206225,208224,208829,209093,210464,215355,217264,
#Partially deleted in new
chr10	21534164	21557182	chr10:21534164-21557182	1	+	21534644	21556942	0	4	356,160,80,540,	0,480,4668,22478,
#Partially deleted in new
chr10	21534172	21743630	chr10:21534172-21743630	3	+	21534644	21740234	0	24	348,160,80,55,110,104,94,96,96,256,570,45,33,48,179,112,73,155,189,89,362,97,83,1692,	0,472,4660,52121,61158,78175,80658,82939,117500,136276,139177,147159,148052,154318,179599,192071,193683,196727,198726,199331,199595,200966,205981,207766,
#Partially deleted in new
chr10	21534342	21743630	chr10:21534342-21743630	1	+	21534644	21741983	0	23	178,160,80,55,110,104,94,96,96,256,570,45,33,179,112,73,155,189,89,362,97,207,1692,	0,302,4490,51951,60988,78005,80488,82769,117330,136106,139007,146989,147882,179429,191901,193513,196557,198556,199161,199425,200796,205687,207596,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	21534344	21557025	chr10:21534344-21557025	1	+	21534644	21556677	0	5	176,160,80,106,383,	0,300,4488,17471,22298,
#Partially deleted in new
chr10	21534467	21538964	chr10:21534467-21538964	0	+	21534467	21534467	8553170	3	27,160,132,	0,177,4365,
#Partially deleted in new
chr10	21534489	21612451	chr10:21534489-21612451	0	+	21534489	21534489	8553170	7	31,160,80,204,55,110,104,	0,155,4343,23131,51804,60841,77858,
#Partially deleted in new
chr10	21534644	21743626	chr10:21534644-21743626	1	+	21534644	21741983	0	22	160,80,55,110,104,94,96,96,256,570,45,33,179,112,73,155,189,89,362,97,207,1688,	0,4188,51649,60686,77703,80186,82467,117028,135804,138705,146687,147580,179127,191599,193211,196255,198254,198859,199123,200494,205385,207294,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	21534644	21556677	chr10:21534644-21556677	1	+	21534644	21556677	0	4	160,80,106,35,	0,4188,17171,21998,
#Partially deleted in new
chr10	21534701	21595582	chr10:21534701-21595582	0	+	21534701	21534701	8553170	4	103,80,55,252,	0,4131,51592,60629,
#Partially deleted in new
chr10	21534748	21595378	chr10:21534748-21595378	0	+	21534748	21595378	789624	3	56,80,48,	0,4084,60582,
#Partially deleted in new
chr10	21534748	21595384	chr10:21534748-21595384	0	+	21534748	21534748	8553170	3	56,55,54,	0,51545,60582,
#Partially deleted in new
chr10	21534748	21595384	chr10:21534748-21595384	0	+	21534748	21534748	8553170	5	56,80,52,55,54,	0,4084,37226,51545,60582,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	21564470	21564577	chr10:21564470-21564577	3	-	21564470	21564470	8553170	1	107,	0,
#Deleted in new
chr10	21624591	21626286	chr10:21624591-21626286	7	-	21624591	21624591	16724991	1	1695,	0,
#Partially deleted in new
chr10	21651753	21730944	chr10:21651753-21730944	0	+	21651753	21730944	789624	10	15,256,279,45,33,48,179,112,73,45,	0,18695,21887,29578,30471,36737,62018,74490,76102,79146,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	21661634	21661741	chr10:21661634-21661741	3	-	21661634	21661634	8553170	1	107,	0,
#Deleted in new
chr10	21668971	21671014	chr10:21668971-21671014	0	+	21668971	21668971	8553170	2	81,566,	0,1477,
#Partially deleted in new
chr10	21673577	21713922	chr10:21673577-21713922	0	+	21673577	21713922	789624	3	342,45,151,	0,7754,40194,
#Partially deleted in new
chr10	21756536	22003725	chr10:21756536-22003725	3	-	21756686	22003434	0	12	219,449,49,120,158,91,94,98,166,47,102,513,	0,2633,9724,49443,125745,147985,162242,163295,164261,171969,172503,246676,
#Partially deleted in new
chr10	21759508	21860906	chr10:21759508-21860906	0	-	21759508	21759508	8553170	4	110,49,120,163,	0,6752,46471,101235,
#Deleted in new
chr10	21785291	21785587	chr10:21785291-21785587	3	+	21785291	21785291	8553170	1	296,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	21865334	21865921	chr10:21865334-21865921	3	-	21865334	21865334	8553170	1	587,	0,
#Partially deleted in new
chr10	21919888	22003585	chr10:21919888-22003585	0	-	21920957	22003434	789624	4	41,166,102,373,	0,909,9151,83324,
#Partially deleted in new
chr10	21919902	22003399	chr10:21919902-22003399	0	-	21919902	21919902	8553170	4	27,47,102,187,	0,8603,9137,83310,
#Partially deleted in new
chr10	21920609	22003769	chr10:21920609-22003769	0	-	21920609	21920609	8553170	3	354,102,557,	0,8430,82603,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	21933142	21933438	chr10:21933142-21933438	3	+	21933142	21933142	8553170	1	296,	0,
#Partially deleted in new
chr10	22162991	22165794	chr10:22162991-22165794	7	+	22162991	22162991	16724991	3	39,976,59,	0,1442,2744,
#Partially deleted in new
chr10	22163091	22164306	chr10:22163091-22164306	7	+	22163091	22163091	16724991	2	168,305,	0,910,
#Deleted in new
chr10	22208813	22210021	chr10:22208813-22210021	3	-	22208882	22209983	789624	1	1208,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	22218073	22221168	chr10:22218073-22221168	3	+	22218073	22218073	8553170	1	3095,	0,
#Partially deleted in new
chr10	22225697	22226024	chr10:22225697-22226024	7	+	22225697	22225697	16724991	1	327,	0,
#Deleted in new
chr10	22252071	22254589	chr10:22252071-22254589	3	+	22252071	22252071	8553170	1	2518,	0,
#Deleted in new
chr10	22257785	22258548	chr10:22257785-22258548	3	+	22257785	22257785	8553170	1	763,	0,
#Deleted in new
chr10	22266990	22267346	chr10:22266990-22267346	7	+	22266990	22266990	16724991	1	356,	0,
#Deleted in new
chr10	22315973	22320308	chr10:22315973-22320308	3	+	22316417	22319998	789624	8	583,112,64,35,61,57,60,370,	0,1910,2131,2298,2679,2832,2985,3965,
#Deleted in new
chr10	22316385	22320306	chr10:22316385-22320306	0	+	22316385	22316385	8553170	5	171,112,64,442,1501,	0,1498,1719,1886,2420,
#Deleted in new
chr10	22316387	22326558	chr10:22316387-22326558	0	+	22316417	22326558	789624	5	169,112,64,35,128,	0,1496,1717,1884,10043,
#Deleted in new
chr10	22316398	22319281	chr10:22316398-22319281	0	+	22316398	22316398	8553170	4	158,112,64,1010,	0,1485,1706,1873,
#Deleted in new
chr10	22316408	22320303	chr10:22316408-22320303	0	+	22316408	22316408	8553170	5	148,112,758,60,365,	0,1475,1696,2550,3530,
#Deleted in new
chr10	22316408	22329542	chr10:22316408-22329542	3	+	22316417	22329542	789624	14	148,112,64,35,60,131,97,56,51,109,46,99,81,330,	0,1475,1696,1863,2550,10022,10481,11186,11333,11541,11725,12191,12639,12804,
#Deleted in new
chr10	22316414	22318403	chr10:22316414-22318403	0	+	22316414	22316414	8553170	2	142,520,	0,1469,
#Deleted in new
chr10	22316416	22320256	chr10:22316416-22320256	0	+	22316416	22319998	789624	6	140,112,61,57,60,318,	0,1467,2236,2389,2542,3522,
#Deleted in new
chr10	22316419	22320287	chr10:22316419-22320287	0	+	22316419	22320062	789624	6	137,112,64,35,60,349,	0,1464,1685,1852,2539,3519,
#Deleted in new
chr10	22316427	22318713	chr10:22316427-22318713	0	+	22316427	22317873	789624	5	129,139,64,35,61,	0,1429,1677,1844,2225,
#Deleted in new
chr10	22316428	22320306	chr10:22316428-22320306	0	+	22316428	22316428	8553170	7	128,112,64,361,57,60,368,	0,1455,1676,1924,2377,2530,3510,
#Deleted in new
chr10	22316430	22326521	chr10:22316430-22326521	0	+	22316430	22326521	789624	3	126,112,91,	0,1453,10000,
#Deleted in new
chr10	22316431	22326521	chr10:22316431-22326521	0	+	22316431	22316431	8553170	8	125,112,64,35,61,57,60,91,	0,1452,1673,1840,2221,2374,2527,9999,
#Deleted in new
chr10	22316440	22320306	chr10:22316440-22320306	0	+	22316440	22316440	8553170	5	116,112,64,747,368,	0,1443,1664,1831,3498,
#Deleted in new
chr10	22316444	22320306	chr10:22316444-22320306	0	+	22316444	22319998	789624	7	112,64,35,61,57,60,368,	0,1660,1827,2208,2361,2514,3494,
#Deleted in new
chr10	22316451	22329098	chr10:22316451-22329098	0	+	22316451	22326486	789624	9	105,131,97,56,51,109,46,99,51,	0,9979,10438,11143,11290,11498,11682,12148,12596,
#Deleted in new
chr10	22316734	22318826	chr10:22316734-22318826	0	+	22316734	22316734	8553170	6	233,112,64,35,61,21,	0,1149,1370,1537,1918,2071,
#Deleted in new
chr10	22317493	22318364	chr10:22317493-22318364	0	+	22317493	22317493	8553170	4	49,112,64,12,	0,390,611,859,
#Deleted in new
chr10	22317883	22320306	chr10:22317883-22320306	0	+	22317883	22317883	8553170	6	112,64,61,57,60,368,	0,221,769,922,1075,2055,
#Deleted in new
chr10	22318271	22319281	chr10:22318271-22319281	0	+	22318271	22319030	789624	4	35,61,57,323,	0,381,534,687,
#Deleted in new
chr10	22318300	22326521	chr10:22318300-22326521	0	+	22318300	22318300	8553170	4	413,57,60,91,	0,505,658,8130,
#Deleted in new
chr10	22321210	22331484	chr10:22321210-22331484	3	+	22326449	22329542	0	10	486,131,97,56,51,109,46,99,81,2272,	0,5220,5679,6384,6531,6739,6923,7389,7837,8002,
#Deleted in new
chr10	22321458	22326940	chr10:22321458-22326940	0	+	22321458	22321458	8553170	2	238,510,	0,4972,
#Deleted in new
chr10	22321584	22327804	chr10:22321584-22327804	0	+	22321584	22321584	8553170	4	112,131,97,210,	0,4846,5305,6010,
#Deleted in new
chr10	22322105	22328160	chr10:22322105-22328160	0	+	22326449	22328160	789624	7	65,131,97,56,51,109,27,	0,4325,4784,5489,5636,5844,6028,
#Deleted in new
chr10	22325656	22327791	chr10:22325656-22327791	0	+	22326449	22327791	789624	5	72,131,97,56,50,	0,774,1233,1938,2085,
#Deleted in new
chr10	22325669	22328671	chr10:22325669-22328671	0	+	22325669	22325669	8553170	7	53,556,56,51,109,46,72,	0,761,1925,2072,2280,2464,2930,
#Deleted in new
chr10	22325932	22326831	chr10:22325932-22326831	0	+	22325932	22325932	8553170	2	144,401,	0,498,
#Deleted in new
chr10	22326518	22329398	chr10:22326518-22329398	0	+	22326518	22329398	789624	6	43,97,46,99,81,186,	0,371,1615,2081,2529,2694,
#Deleted in new
chr10	22327881	22329090	chr10:22327881-22329090	0	+	22327881	22327881	8553170	4	177,46,99,43,	0,252,718,1166,
#Deleted in new
chr10	22327945	22329491	chr10:22327945-22329491	0	+	22327945	22327945	8553170	4	234,99,81,279,	0,654,1102,1267,
#Deleted in new
chr10	22332403	22332987	chr10:22332403-22332987	3	+	22332403	22332403	8553170	1	584,	0,
#Deleted in new
chr10	22332586	22332981	chr10:22332586-22332981	3	-	22332586	22332586	8553170	1	395,	0,
#Deleted in new
chr10	22340376	22340615	chr10:22340376-22340615	3	-	22340376	22340376	8553170	1	239,	0,
#Partially deleted in new
chr10	22345444	22417596	chr10:22345444-22417596	1	+	22345763	22412505	789624	11	374,167,184,206,174,153,192,117,146,79,978,	0,19408,23050,41309,42378,43715,46284,55716,65586,67000,71174,
#Partially deleted in new
chr10	22345469	22417621	chr10:22345469-22417621	3	+	22345611	22416688	789624	11	167,96,167,184,206,174,153,192,117,146,1003,	0,253,19383,23025,41284,42353,43690,46259,55691,65561,71149,
#Partially deleted in new
chr10	22345486	22401255	chr10:22345486-22401255	0	+	22345611	22401255	789624	5	150,96,167,192,95,	0,236,19366,46242,55674,
#Partially deleted in new
chr10	22345486	22401277	chr10:22345486-22401277	0	+	22345486	22345486	8553170	4	150,96,192,117,	0,236,46242,55674,
#Partially deleted in new
chr10	22345496	22417610	chr10:22345496-22417610	1	+	22345611	22416681	789624	10	140,96,167,184,206,174,153,192,117,992,	0,226,19356,22998,41257,42326,43663,46232,55664,71122,
#Partially deleted in new
chr10	22345497	22386792	chr10:22345497-22386792	0	+	22345611	22386792	789624	5	139,324,167,184,39,	0,225,19355,22997,41256,
#Partially deleted in new
chr10	22360821	22417609	chr10:22360821-22417609	1	+	22360821	22416688	789624	10	46,167,184,206,174,153,192,117,146,991,	0,4031,7673,25932,27001,28338,30907,40339,50209,55797,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	22361171	22413067	chr10:22361171-22413067	3	+	22361171	22361171	8553170	2	250,219,	0,51677,
#Partially deleted in new
chr10	22391802	22411670	chr10:22391802-22411670	0	+	22391802	22391802	8553170	3	118,117,640,	0,9358,19228,
#Partially deleted in new
chr10	22391804	22454224	chr10:22391804-22454224	0	+	22391804	22391804	8553170	4	116,117,265,59,	0,9356,56920,62361,
#Partially deleted in new
chr10	22475454	22478026	chr10:22475454-22478026	3	-	22475454	22475454	8553170	1	2572,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	22534848	22714555	chr10:22534848-22714555	3	-	22537200	22714326	0	10	2433,104,244,114,39,147,153,97,98,373,	0,5122,6955,15810,33002,38462,56780,73078,74771,179334,
#Partially deleted in new
chr10	22536737	22591713	chr10:22536737-22591713	1	-	22537200	22591658	789624	8	544,104,244,114,39,42,147,85,	0,3233,5066,13921,31113,32275,36573,54891,
#Deleted in new
chr10	22536892	22539635	chr10:22536892-22539635	0	-	22536892	22536892	8553170	2	389,170,	0,2573,
#Partially deleted in new
chr10	22537014	22714108	chr10:22537014-22714108	1	-	22537200	22609684	0	10	267,104,244,114,39,147,153,97,98,173,	0,2956,4789,13644,30836,36296,54614,70912,72605,176921,
#Partially deleted in new
chr10	22541951	22591675	chr10:22541951-22591675	0	-	22541951	22591658	789624	5	96,114,39,147,47,	0,8707,25899,31359,49677,
#Partially deleted in new
chr10	22567536	22609717	chr10:22567536-22609717	0	-	22567536	22567536	8553170	6	234,39,147,153,97,98,	0,314,5774,24092,40390,42083,
#Partially deleted in new
chr10	22607817	22609717	chr10:22607817-22609717	0	-	22607817	22607817	8553170	2	206,98,	0,1802,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	22642021	22691830	chr10:22642021-22691830	0	-	22642021	22642021	8553170	5	41,54,121,133,209,	0,4197,17588,19721,49600,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	22693952	22694639	chr10:22693952-22694639	3	-	22693952	22693952	8553170	1	687,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	22787392	22787499	chr10:22787392-22787499	3	+	22787392	22787392	8553170	1	107,	0,
#Partially deleted in new
chr10	22928023	23037587	chr10:22928023-23037587	1	+	22931996	23037479	789624	19	83,49,118,126,69,176,195,184,153,106,250,137,169,98,99,117,201,163,318,	0,3972,18120,27783,31046,31375,33860,40282,53316,53571,70124,73895,75222,78860,80252,80791,102572,104837,109246,
#Partially deleted in new
chr10	22928023	23038523	chr10:22928023-23038523	1	+	22968362	23037479	789624	16	83,49,126,69,184,153,106,250,137,169,98,99,117,201,163,1254,	0,3972,27783,31046,40282,53316,53571,70124,73895,75222,78860,80252,80791,102572,104837,109246,
#Partially deleted in new
chr10	22928036	23037589	chr10:22928036-23037589	3	+	22931996	23037479	789624	19	70,49,118,126,69,176,195,184,153,106,250,137,169,98,99,96,201,163,320,	0,3959,18107,27770,31033,31362,33847,40269,53303,53558,70111,73882,75209,78847,80239,80799,102559,104824,109233,
#Partially deleted in new
chr10	22928063	23014489	chr10:22928063-23014489	1	+	22931996	23014121	789624	17	43,49,118,126,69,176,195,184,153,106,250,137,169,98,99,117,390,	0,3932,18080,27743,31006,31335,33820,40242,53276,53531,70084,73855,75182,78820,80212,80751,86036,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	22928076	22981608	chr10:22928076-22981608	0	+	22928076	22928076	8553170	10	30,49,69,176,67,92,140,184,153,14,	0,3919,30993,31322,31784,32861,33862,40229,53263,53518,
#Partially deleted in new
chr10	22928076	22981453	chr10:22928076-22981453	0	+	22928076	22928076	8553170	6	30,49,126,69,184,114,	0,3919,27730,30993,40229,53263,
#Partially deleted in new
chr10	22928084	22961966	chr10:22928084-22961966	0	+	22955904	22961966	789624	6	22,49,126,69,176,83,	0,3911,27722,30985,31314,33799,
#Partially deleted in new
chr10	22928084	22968342	chr10:22928084-22968342	0	+	22928084	22928084	8553170	7	22,49,118,126,69,176,37,	0,3911,18059,27722,30985,31314,40221,
#Partially deleted in new
chr10	22928085	22962067	chr10:22928085-22962067	0	+	22928085	22928085	8553170	7	21,49,118,126,69,176,75,	0,3910,18058,27721,30984,31313,33907,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	22931995	22946683	chr10:22931995-22946683	0	+	22931995	22931995	8553170	2	49,540,	0,14148,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	22955195	22961727	chr10:22955195-22961727	0	+	22955195	22955195	8553170	5	194,126,69,176,1867,	0,611,3874,4203,4665,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	22997254	22997358	chr10:22997254-22997358	7	+	22997254	22997254	16724991	1	104,	0,
#Partially deleted in new
chr10	23006734	23008374	chr10:23006734-23008374	0	+	23006734	23006734	8553170	2	247,99,	0,1541,
#Deleted in new
chr10	23030630	23031195	chr10:23030630-23031195	0	+	23030630	23030630	8553170	2	166,230,	0,335,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	23095505	23122013	chr10:23095505-23122013	3	+	23095608	23120862	789624	5	221,101,77,148,1256,	0,8638,14736,23798,25252,
#Partially deleted in new
chr10	23104143	23120954	chr10:23104143-23120954	0	+	23104143	23119398	789624	5	101,77,89,148,197,	0,6098,14902,15160,16614,
#Partially deleted in new
chr10	23119143	23120893	chr10:23119143-23120893	0	+	23119143	23119143	8553170	2	308,136,	0,1614,
#Deleted in new
chr10	23136923	23137661	chr10:23136923-23137661	7	+	23136923	23136923	16724991	1	738,	0,
#Deleted in new
chr10	23166984	23167101	chr10:23166984-23167101	3	+	23166984	23166984	8553170	1	117,	0,
#Deleted in new
chr10	23192326	23194252	chr10:23192326-23194252	3	+	23192530	23193906	789624	2	988,549,	0,1377,
#Deleted in new
chr10	23192563	23193997	chr10:23192563-23193997	0	+	23192563	23193748	789624	2	114,294,	0,1140,
#Deleted in new
chr10	23193270	23194163	chr10:23193270-23194163	0	+	23193270	23193906	789624	2	44,412,	0,481,
#Deleted in new
chr10	23193331	23194163	chr10:23193331-23194163	0	+	23193331	23193728	789624	2	92,460,	0,372,
#Deleted in new
chr10	23193353	23194162	chr10:23193353-23194162	0	+	23193353	23193773	789624	2	70,414,	0,395,
#Deleted in new
chr10	23193360	23194163	chr10:23193360-23194163	0	+	23193360	23193773	789624	2	63,412,	0,391,
#Partially deleted in new
chr10	23201915	23344845	chr10:23201915-23344845	3	-	23204172	23344777	789624	16	2340,61,75,88,66,80,165,60,66,59,148,156,75,144,121,277,	0,21682,21828,37813,48539,48696,64346,65279,80097,87984,89216,101388,118825,120478,131146,142653,
#Partially deleted in new
chr10	23203374	23344694	chr10:23203374-23344694	0	-	23223789	23344694	789624	15	881,61,75,71,80,165,60,66,59,148,156,75,144,121,126,	0,20223,20369,47075,47237,62887,63820,78638,86525,87757,99929,117366,119019,129687,141194,
#Deleted in new
chr10	23258210	23258545	chr10:23258210-23258545	7	+	23258210	23258210	16724991	1	335,	0,
#Partially deleted in new
chr10	23267194	23343964	chr10:23267194-23343964	0	-	23267194	23343964	789624	9	60,66,59,148,156,75,144,121,59,	0,14818,22705,23937,36109,53546,55199,65867,76711,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	23302080	23344678	chr10:23302080-23344678	0	-	23302951	23344678	8553170	6	880,156,75,144,121,110,	0,1223,18660,20313,30981,42488,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	23316736	23344845	chr10:23316736-23344845	1	-	23318909	23344777	789624	5	2182,75,144,121,277,	0,4004,5657,16325,27832,
#Deleted in new
chr10	23343956	23345181	chr10:23343956-23345181	3	+	23343956	23343956	789624	2	134,758,	0,467,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	23393404	23393467	chr10:23393404-23393467	3	+	23393404	23393404	5263520	1	63,	0,
#Deleted in new
chr10	23439457	23442390	chr10:23439457-23442390	3	+	23439457	23440903	0	1	2933,	0,
#Partially deleted in new
chr10	23694745	24547843	chr10:23694745-24547843	1	+	24219795	24546324	789624	19	489,150,284,199,199,94,833,105,50,167,176,131,148,442,184,164,168,123,2017,	0,312479,524880,686123,738249,743640,778482,799754,800401,806633,818513,825377,827036,829577,833190,837084,838324,850235,851081,
#Partially deleted in new
chr10	23694781	23877495	chr10:23694781-23877495	0	+	23694781	23694781	8553170	2	453,90,	0,182624,
#Partially deleted in new
chr10	24042130	24219909	chr10:24042130-24219909	0	+	24042284	24219909	789624	2	365,284,	0,177495,
#Partially deleted in new
chr10	24157834	24158781	chr10:24157834-24158781	7	+	24157834	24157834	16724991	1	947,	0,
#Partially deleted in new
chr10	24208790	24547848	chr10:24208790-24547848	1	+	24209193	24546324	789624	19	473,284,199,199,94,833,50,167,176,131,148,442,184,161,168,120,78,123,2022,	0,10835,172078,224204,229595,264437,286356,292588,304468,311332,312991,315532,319145,323042,324279,327983,333902,336190,337036,
#Partially deleted in new
chr10	24208790	24527942	chr10:24208790-24527942	0	+	24209193	24527942	789624	13	473,284,199,199,94,833,50,167,176,131,148,442,7,	0,10835,172078,224204,229595,264437,286356,292588,304468,311332,312991,315532,319145,
#Partially deleted in new
chr10	24208790	24547848	chr10:24208790-24547848	1	+	24219795	24546324	789624	18	473,284,199,199,94,833,105,50,167,176,131,148,442,184,164,168,123,2022,	0,10835,172078,224204,229595,264437,285709,286356,292588,304468,311332,312991,315532,319145,323039,324279,336190,337036,
#Partially deleted in new
chr10	24208790	24547848	chr10:24208790-24547848	1	+	24209193	24546324	789624	18	473,284,199,199,94,833,50,167,176,131,148,442,184,164,168,120,123,2022,	0,10835,172078,224204,229595,264437,286356,292588,304468,311332,312991,315532,319145,323039,324279,327983,336190,337036,
#Partially deleted in new
chr10	24209163	24547843	chr10:24209163-24547843	3	+	24209193	24546324	789624	21	100,284,199,199,94,833,105,50,167,176,131,148,442,184,164,168,120,78,1599,123,2017,	0,10462,171705,223831,229222,264064,285336,285983,292215,304095,310959,312618,315159,318772,322666,323906,327610,333529,333719,335817,336663,
#Partially deleted in new
chr10	24209166	24381005	chr10:24209166-24381005	0	+	24209193	24381005	789624	4	97,284,50,137,	0,10459,157952,171702,
#Partially deleted in new
chr10	24239194	24527942	chr10:24239194-24527942	0	+	24380964	24527942	789624	12	143,199,199,94,833,50,167,176,131,148,442,7,	0,141674,193800,199191,234033,255952,262184,274064,280928,282587,285128,288741,
#Partially deleted in new
chr10	24255245	24255333	chr10:24255245-24255333	3	+	24255245	24255245	8553170	1	88,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	24275684	24275781	chr10:24275684-24275781	3	+	24275684	24275684	5263520	1	97,	0,
#Partially deleted in new
chr10	24449432	24545268	chr10:24449432-24545268	1	+	24473227	24545118	789624	14	332,833,50,167,176,131,148,442,184,164,168,120,78,288,	0,23795,45714,51946,63826,70690,72349,74890,78503,82397,83637,87341,93260,95548,
#Partially deleted in new
chr10	24466530	24547843	chr10:24466530-24547843	1	+	24473227	24545118	789624	15	260,833,50,167,176,131,148,442,184,164,168,120,78,1599,2863,	0,6697,28616,34848,46728,53592,55251,57792,61405,65299,66539,70243,76162,76352,78450,
#Partially deleted in new
chr10	24466530	24547843	chr10:24466530-24547843	1	+	24473227	24545118	789624	13	260,833,50,167,176,131,148,442,184,164,168,120,2863,	0,6697,28616,34848,46728,53592,55251,57792,61405,65299,66539,70243,78450,
#Partially deleted in new
chr10	24466530	24545316	chr10:24466530-24545316	1	+	24473227	24545118	789624	12	260,833,50,167,176,131,148,442,184,164,168,336,	0,6697,28616,34848,46728,53592,55251,57792,61405,65299,66539,78450,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	24481179	24483034	chr10:24481179-24483034	3	-	24481179	24481179	8553170	1	1855,	0,
#Partially deleted in new
chr10	24494973	24513347	chr10:24494973-24513347	0	+	24494973	24494973	8553170	3	223,167,89,	0,6405,18285,
#Partially deleted in new
chr10	24533211	24543980	chr10:24533211-24543980	0	+	24533211	24543980	789624	5	26,120,36,78,1098,	0,3562,9295,9481,9671,
#Deleted in new
chr10	24542419	24543708	chr10:24542419-24543708	0	+	24542419	24542419	8553170	2	351,826,	0,463,
#Partially deleted in new
chr10	24583608	24723668	chr10:24583608-24723668	3	-	24584411	24721899	789624	26	2498,32,106,42,126,90,74,79,156,143,137,65,285,126,37,103,159,1897,30,55,79,93,25,180,443,107,	0,5662,7616,8033,8278,11341,11508,12108,12279,13131,13838,14336,17037,18369,20703,23890,24136,35864,39124,46387,49793,51402,83376,86609,138228,139953,
#Partially deleted in new
chr10	24583608	24723668	chr10:24583608-24723668	1	-	24584411	24721896	789624	19	2498,32,106,42,126,90,74,79,156,101,8,1220,55,79,93,25,180,443,107,	0,5662,7616,8033,8278,11341,11508,12108,12279,13131,22158,36541,46387,49793,51402,83376,86609,138228,139953,
#Partially deleted in new
chr10	24583613	24621369	chr10:24583613-24621369	0	-	24583613	24583613	8553170	17	2493,32,106,42,126,90,74,79,995,137,65,285,126,37,103,159,1897,	0,5657,7611,8028,8273,11336,11503,12103,12274,13833,14331,17032,18364,20698,23885,24131,35859,
#Partially deleted in new
chr10	24583630	24602103	chr10:24583630-24602103	0	-	24590509	24602103	789624	15	2476,32,97,106,42,126,90,74,79,156,143,137,65,285,126,	0,5640,6823,7594,8011,8256,11319,11486,12086,12257,13109,13816,14314,17015,18347,
#Partially deleted in new
chr10	24584386	24721990	chr10:24584386-24721990	1	-	24584411	24721896	789624	18	1720,32,106,42,126,90,74,79,156,111,4,1217,55,79,93,25,180,154,	0,4884,6838,7255,7500,10563,10730,11330,11501,12353,12465,35766,45609,49015,50624,82598,85831,137450,
#Partially deleted in new
chr10	24585919	24590042	chr10:24585919-24590042	0	-	24585919	24585919	8553170	2	187,772,	0,3351,
#Partially deleted in new
chr10	24585929	24622834	chr10:24585929-24622834	1	-	24590336	24621255	789624	20	177,32,274,106,42,126,90,74,79,156,143,137,65,285,126,37,103,159,1897,102,	0,3341,4276,5295,5712,5957,9020,9187,9787,9958,10810,11517,12015,14716,16048,18382,21569,21815,33543,36803,
#Partially deleted in new
chr10	24586032	24595960	chr10:24586032-24595960	0	-	24586032	24595960	789624	8	74,32,42,126,90,74,79,73,	0,3238,5609,5854,8917,9084,9684,9855,
#Partially deleted in new
chr10	24591344	24595036	chr10:24591344-24595036	0	-	24591344	24591344	8553170	3	339,126,87,	0,542,3605,
#Deleted in new
chr10	24594969	24596043	chr10:24594969-24596043	0	-	24594969	24596043	789624	4	31,74,79,156,	0,147,747,918,
#Partially deleted in new
chr10	24596688	24721927	chr10:24596688-24721927	1	-	24596688	24721899	789624	15	194,137,65,285,126,37,103,159,1897,55,79,93,25,180,91,	0,758,1256,3957,5289,7623,10810,11056,22784,33307,36713,38322,70296,73529,125148,
#Partially deleted in new
chr10	24596821	24723240	chr10:24596821-24723240	0	-	24596821	24721899	789624	17	61,137,65,285,126,37,103,159,1897,30,55,79,93,25,180,443,84,	0,625,1123,3824,5156,7490,10677,10923,22651,25911,33174,36580,38189,70163,73396,125015,126335,
#Partially deleted in new
chr10	24597468	24607871	chr10:24597468-24607871	0	-	24597468	24597468	8553170	7	115,65,143,126,37,103,127,	0,476,3177,4509,6843,10030,10276,
#Deleted in new
chr10	24607443	24607878	chr10:24607443-24607878	0	-	24607443	24607443	8553170	2	158,134,	0,301,
#Deleted in new
chr10	24620878	24622842	chr10:24620878-24622842	0	-	24620878	24620878	8553170	2	491,110,	0,1854,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	24629013	24722034	chr10:24629013-24722034	0	-	24629013	24629013	8553170	6	1037,79,93,25,180,198,	0,4388,5997,37971,41204,92823,
#Partially deleted in new
chr10	24629523	24721866	chr10:24629523-24721866	0	-	24629784	24721866	789624	7	339,55,79,93,25,180,30,	0,472,3878,5487,37461,40694,92313,
#Partially deleted in new
chr10	24629995	24706630	chr10:24629995-24706630	0	-	24629995	24706595	789624	6	55,79,93,25,180,119,	0,3406,5015,36989,40222,76516,
#Partially deleted in new
chr10	24670338	24723247	chr10:24670338-24723247	0	-	24670338	24670338	8553170	4	59,82,443,91,	0,43958,51498,52818,
#Deleted in new
chr10	24722011	24722760	chr10:24722011-24722760	0	-	24722011	24722011	8553170	2	268,275,	0,474,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	24816330	24822950	chr10:24816330-24822950	3	+	24816330	24816330	8553170	2	1469,588,	0,6032,
#Partially deleted in new
chr10	24848606	24952604	chr10:24848606-24952604	3	-	24849843	24952575	0	9	1285,77,47,83,18,66,184,107,77,	0,2781,6711,8306,9785,23391,88577,93723,103921,
#Partially deleted in new
chr10	24849706	24952584	chr10:24849706-24952584	1	-	24849871	24952575	0	8	185,47,83,18,66,184,107,57,	0,5611,7206,8685,22291,87477,92623,102821,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	24867644	24868190	chr10:24867644-24868190	7	+	24867644	24867644	16724991	2	163,105,	0,441,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	24908300	24952592	chr10:24908300-24952592	1	-	24908502	24952575	0	4	385,184,107,65,	0,28883,34029,44227,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	24908521	24908812	chr10:24908521-24908812	3	-	24908521	24908521	8553170	1	291,	0,
#Partially deleted in new
chr10	24952349	25161236	chr10:24952349-25161236	3	+	24952349	24952349	8553170	5	99,70,167,130,1586,	0,9456,69392,206019,207301,
#Deleted in new
chr10	24953240	24953513	chr10:24953240-24953513	3	+	24953240	24953240	8553170	1	273,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	24981978	25016156	chr10:24981978-25016156	3	-	24984369	25015936	789624	6	2398,170,147,224,146,297,	0,2757,8484,13667,17422,33881,
#Partially deleted in new
chr10	24981978	25016160	chr10:24981978-25016160	0	-	24984369	25015936	789624	7	792,167,170,147,224,146,301,	0,2231,2757,8484,13667,17422,33881,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	24981979	25062279	chr10:24981979-25062279	1	-	24984369	25061148	789624	6	2397,170,147,224,258,98,	0,2756,8483,13666,79132,80202,
#Partially deleted in new
chr10	24984401	25016156	chr10:24984401-25016156	1	-	24984731	25015936	789624	5	504,147,224,146,297,	0,6061,11244,14999,31458,
#Partially deleted in new
chr10	24984835	25015960	chr10:24984835-25015960	0	-	24984835	24995804	789624	4	70,147,224,101,	0,5627,10810,31024,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	25016657	25026664	chr10:25016657-25026664	1	+	25023223	25025455	789624	3	35,167,3489,	0,5084,6518,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	25016657	25026664	chr10:25016657-25026664	3	+	25023223	25025455	789624	3	132,167,3489,	0,5084,6518,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	25113057	25161236	chr10:25113057-25161236	3	+	25113057	25113057	789624	7	629,94,122,183,248,130,1586,	0,3554,4234,12665,13193,45311,46593,
#Partially deleted in new
chr10	25158071	25176276	chr10:25158071-25176276	3	-	25158071	25158071	789624	2	1832,601,	0,17604,
#Partially deleted in new
chr10	25174801	25602220	chr10:25174801-25602220	1	+	25175657	25599274	8553170	12	364,854,106,103,224,69,110,239,139,106,147,4449,	0,667,46250,221109,237448,291849,376174,397847,414205,419490,421841,422970,
#Partially deleted in new
chr10	25175061	25602226	chr10:25175061-25602226	3	+	25175420	25599274	789624	11	1261,106,103,224,69,110,239,139,106,147,4455,	0,45990,220849,237188,291589,375914,397587,413945,419230,421581,422710,
#Partially deleted in new
chr10	25244060	25244854	chr10:25244060-25244854	7	-	25244060	25244060	16724991	2	81,306,	0,488,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	25393556	25393844	chr10:25393556-25393844	3	-	25393556	25393556	8553170	1	288,	0,
#Partially deleted in new
chr10	25466189	25475949	chr10:25466189-25475949	0	+	25466189	25466189	8553170	3	169,69,519,	0,461,9241,
#Partially deleted in new
chr10	25594212	25602226	chr10:25594212-25602226	0	+	25594212	25594212	8553170	3	185,147,4455,	0,2430,3559,
#Deleted in new
chr10	25647569	25648104	chr10:25647569-25648104	7	-	25647569	25647569	16724991	1	535,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	25651711	25732935	chr10:25651711-25732935	3	+	25651711	25651711	789624	3	88,237,1315,	0,65033,79909,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	25651741	25673416	chr10:25651741-25673416	0	+	25651741	25651741	8553170	4	58,174,115,227,	0,1127,16474,21448,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	25651747	25732774	chr10:25651747-25732774	1	+	25651747	25651747	8553170	8	52,115,123,85,115,92,237,1154,	0,16468,48482,51861,53569,53769,64997,79873,
#Partially deleted in new
chr10	25651774	25683385	chr10:25651774-25683385	1	+	25651774	25651774	789624	4	25,174,115,865,	0,1094,16441,30746,
#Deleted in new
chr10	25691536	25692323	chr10:25691536-25692323	7	+	25691536	25691536	16724991	1	787,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	25813810	25813917	chr10:25813810-25813917	7	-	25813810	25813810	16724991	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	25819362	25819426	chr10:25819362-25819426	3	-	25819362	25819362	8553170	1	64,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	25924447	25933710	chr10:25924447-25933710	3	-	25924447	25924447	789624	4	74,196,54,157,	0,1545,7860,9106,
#Partially deleted in new
chr10	25934070	26212536	chr10:25934070-26212536	3	+	25952110	26211963	789624	35	258,87,185,135,105,100,77,146,66,156,100,117,105,84,203,99,115,127,211,148,154,89,130,80,78,206,112,163,124,895,145,107,41,144,694,	0,1673,18023,20803,62419,63088,82749,87432,89951,92306,132904,134697,136040,136247,154132,162310,162497,186605,191327,194320,209377,211375,213359,219779,220675,223239,231996,234641,236345,239592,242630,259134,267194,268893,277772,
#Partially deleted in new
chr10	25934228	26212536	chr10:25934228-26212536	1	+	25952110	26211963	789624	35	100,87,185,135,105,100,77,146,66,156,100,117,105,84,203,99,115,127,211,148,154,89,130,80,78,206,112,163,124,895,145,107,41,144,694,	0,1515,17865,20645,62261,62930,82591,87274,89793,92148,132746,134539,135882,136089,153974,162152,162339,186447,191169,194162,209219,211217,213201,219621,220517,223081,231838,234483,236187,239434,242472,258976,267036,268735,277614,
#Partially deleted in new
chr10	25934228	26166239	chr10:25934228-26166239	0	+	25934228	25934228	8553170	27	100,87,185,135,105,100,77,146,66,156,100,117,105,84,203,99,115,127,211,148,154,89,130,80,78,206,173,	0,1515,17865,20645,62261,62930,82591,87274,89793,92148,132746,134539,135882,136089,153974,162152,162339,186447,191169,194162,209219,211217,213201,219621,220517,223081,231838,
#Partially deleted in new
chr10	25934273	26023481	chr10:25934273-26023481	1	+	25952110	26021661	789624	8	55,87,185,135,105,100,77,1979,	0,1470,17820,20600,62216,62885,82546,87229,
#Partially deleted in new
chr10	25935787	26212209	chr10:25935787-26212209	1	+	25952110	26212061	789624	17	43,185,135,105,100,77,146,66,156,100,117,105,84,203,99,115,367,	0,16306,19086,60702,61371,81032,85715,88234,90589,131187,132980,134323,134530,152415,160593,160780,276055,
#Partially deleted in new
chr10	25935787	26212209	chr10:25935787-26212209	0	+	25952110	26125499	789624	30	43,185,135,105,100,77,146,66,156,100,117,105,84,203,99,115,211,148,154,89,130,80,78,206,112,163,124,107,41,367,	0,16306,19086,60702,61371,81032,85715,88234,90589,131187,132980,134323,134530,152415,160593,160780,189610,192603,207660,209658,211642,218062,218958,221522,230279,232924,234628,257417,265477,276055,
#Partially deleted in new
chr10	25952099	26016915	chr10:25952099-26016915	0	+	25952099	25952099	8553170	5	179,135,105,100,96,	0,2774,44390,45059,64720,
#Partially deleted in new
chr10	26165841	26168839	chr10:26165841-26168839	0	+	26165841	26165841	8553170	2	337,128,	0,2870,
#Partially deleted in new
chr10	26200847	26212333	chr10:26200847-26212333	0	+	26200847	26200847	8553170	4	211,41,144,491,	0,417,2116,10995,
#Partially deleted in new
chr10	26201264	26204502	chr10:26201264-26204502	0	+	26201264	26204193	789624	3	41,144,418,	0,1699,2820,
#Partially deleted in new
chr10	26202720	26212393	chr10:26202720-26212393	0	+	26202720	26202720	8553170	3	46,144,551,	0,243,9122,
#Partially deleted in new
chr10	26216306	26304558	chr10:26216306-26304558	3	+	26216809	26300961	0	16	579,60,150,234,91,113,116,80,55,117,65,79,150,108,90,3771,	0,1303,1535,2736,7580,8232,13355,29614,52812,54333,57329,64702,70038,76158,76595,84481,
#Partially deleted in new
chr10	26216664	26304558	chr10:26216664-26304558	1	+	26216809	26300961	0	17	221,60,150,234,91,113,116,80,55,117,65,79,150,108,90,208,525,	0,945,1177,2378,7222,7874,12997,29256,52454,53975,56971,64344,69680,75800,76237,84123,87369,
#Deleted in new
chr10	26216732	26219320	chr10:26216732-26219320	0	+	26216809	26219320	789624	4	153,60,150,278,	0,877,1109,2310,
#Partially deleted in new
chr10	26217144	26304513	chr10:26217144-26304513	1	+	26219098	26300961	8553170	17	104,60,150,234,91,113,116,80,55,117,65,79,150,108,90,208,480,	0,465,697,1898,6742,7394,12517,28776,51974,53495,56491,63864,69200,75320,75757,83643,86889,
#Deleted in new
chr10	26218192	26224760	chr10:26218192-26224760	0	+	26218192	26218192	8553170	4	133,234,91,222,	0,850,5694,6346,
#Partially deleted in new
chr10	26379033	26387374	chr10:26379033-26387374	7	-	26379033	26379033	16724991	3	1445,73,556,	0,7305,7785,
#Partially deleted in new
chr10	26438202	26567803	chr10:26438202-26567803	3	+	26492326	26567488	0	15	253,202,72,88,293,78,160,122,87,144,111,99,115,104,843,	0,449,54124,58101,62616,64994,73544,75336,95236,97871,103379,121902,122527,124123,128758,
#Partially deleted in new
chr10	26438424	26501938	chr10:26438424-26501938	1	+	26492326	26501177	0	5	31,202,72,88,1120,	0,227,53902,57879,62394,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	26509588	26509704	chr10:26509588-26509704	7	+	26509588	26509588	16724991	1	116,	0,
#Partially deleted in new
chr10	26561942	26567226	chr10:26561942-26567226	0	+	26561942	26561942	8553170	2	487,266,	0,5018,
#Partially deleted in new
chr10	26577675	26579095	chr10:26577675-26579095	5	-	26577675	26577675	16724991	2	172,260,	0,1160,
#Partially deleted in new
chr10	26577675	26579408	chr10:26577675-26579408	5	-	26577675	26577675	16724991	3	172,67,215,	0,1160,1518,
#Partially deleted in new
chr10	26577790	26622338	chr10:26577790-26622338	7	-	26577790	26577790	16724991	8	57,165,168,70,88,109,134,270,	0,23251,24535,27796,30592,39481,39852,44278,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	26589864	26594330	chr10:26589864-26594330	7	+	26589864	26589864	16724991	4	473,104,117,397,	0,1445,2985,4069,
#Partially deleted in new
chr10	26591309	26594271	chr10:26591309-26594271	5	+	26591309	26591309	16724991	2	104,338,	0,2624,
#Partially deleted in new
chr10	26643227	26645016	chr10:26643227-26645016	3	+	26643227	26643227	8553170	2	369,103,	0,1686,
#Partially deleted in new
chr10	26648099	26653454	chr10:26648099-26653454	5	+	26648099	26648099	16724991	4	183,203,104,390,	0,1291,2454,4965,
#Partially deleted in new
chr10	26649331	26653111	chr10:26649331-26653111	4	+	26649331	26649331	16724991	3	262,104,47,	0,1222,3733,
#Partially deleted in new
chr10	26650553	26653383	chr10:26650553-26653383	5	+	26650553	26650553	16724991	2	104,319,	0,2511,
#Partially deleted in new
chr10	26664205	26676159	chr10:26664205-26676159	5	-	26664205	26664205	16724991	3	187,88,44,	0,4201,11910,
#Partially deleted in new
chr10	26664335	26697295	chr10:26664335-26697295	7	-	26664335	26664335	16724991	10	57,80,44,146,167,70,88,129,119,272,	0,3231,11780,15257,16602,19532,22206,27452,28346,32688,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	26695090	26697625	chr10:26695090-26697625	3	-	26695090	26695090	8553170	1	2535,	0,
#Partially deleted in new
chr10	26705307	26724019	chr10:26705307-26724019	0	+	26705307	26705307	8553170	5	87,131,225,112,6,	0,4330,14827,18498,18706,
#Partially deleted in new
chr10	26714621	26715832	chr10:26714621-26715832	7	+	26714621	26714621	16724991	3	96,553,131,	0,231,1080,
#Partially deleted in new
chr10	26720342	26746541	chr10:26720342-26746541	0	+	26720342	26740686	789624	8	17,112,110,81,114,173,81,209,	0,3463,3671,14897,15123,20302,22154,25990,
#Partially deleted in new
chr10	26734650	26746782	chr10:26734650-26746782	0	+	26734650	26734650	8553170	5	73,81,114,81,450,	0,589,815,7846,11682,
#Partially deleted in new
chr10	26746592	26860935	chr10:26746592-26860935	1	-	26748569	26860863	789624	11	2153,186,87,174,101,141,101,15,177,168,189,	0,5005,9062,12469,18625,22259,23652,24482,30472,76545,114154,
#Partially deleted in new
chr10	26746592	26861030	chr10:26746592-26861030	1	-	26748569	26860863	789624	10	2153,186,177,101,141,101,15,177,168,284,	0,5005,12469,18625,22259,23652,24482,30472,76545,114154,
#Partially deleted in new
chr10	26746592	26860971	chr10:26746592-26860971	1	-	26748569	26860863	789624	10	2153,186,87,177,101,141,101,177,168,225,	0,5005,9062,12469,18625,22259,23652,30472,76545,114154,
#Partially deleted in new
chr10	26746592	26860935	chr10:26746592-26860935	1	-	26748569	26860863	789624	12	2153,186,87,177,81,101,141,101,15,177,168,189,	0,5005,9062,12469,17287,18625,22259,23652,24482,30472,76545,114154,
#Partially deleted in new
chr10	26746592	26860973	chr10:26746592-26860973	1	-	26748569	26860863	789624	10	2153,186,87,174,101,141,101,177,168,227,	0,5005,9062,12469,18625,22259,23652,30472,76545,114154,
#Partially deleted in new
chr10	26746592	26860986	chr10:26746592-26860986	1	-	26748569	26860863	789624	9	2153,186,174,101,141,101,177,168,240,	0,5005,12469,18625,22259,23652,30472,76545,114154,
#Partially deleted in new
chr10	26746592	26860892	chr10:26746592-26860892	1	-	26748569	26860863	789624	10	2153,186,174,101,141,101,15,177,168,146,	0,5005,12469,18625,22259,23652,24482,30472,76545,114154,
#Partially deleted in new
chr10	26746595	26861087	chr10:26746595-26861087	1	-	26748569	26860863	789624	10	2150,186,87,101,141,101,15,177,168,341,	0,5002,9059,18622,22256,23649,24479,30469,76542,114151,
#Partially deleted in new
chr10	26746595	26861087	chr10:26746595-26861087	1	-	26748569	26860863	789624	7	2150,186,101,141,101,168,341,	0,5002,18622,22256,23649,76542,114151,
#Partially deleted in new
chr10	26746595	26861087	chr10:26746595-26861087	1	-	26748569	26860863	789624	9	2150,186,101,141,101,15,177,168,341,	0,5002,18622,22256,23649,24479,30469,76542,114151,
#Partially deleted in new
chr10	26748569	26860863	chr10:26748569-26860863	3	-	26748569	26860863	789624	11	176,186,87,177,101,141,101,15,177,168,117,	0,3028,7085,10492,16648,20282,21675,22505,28495,74568,112177,
#Partially deleted in new
chr10	26776625	26823290	chr10:26776625-26823290	0	-	26776625	26776625	8553170	2	616,153,	0,46512,
#Deleted in new
chr10	26789016	26789157	chr10:26789016-26789157	3	+	26789016	26789016	8553170	1	141,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	26790539	26790646	chr10:26790539-26790646	3	-	26790539	26790539	8553170	1	107,	0,
#Partially deleted in new
chr10	26931205	26934923	chr10:26931205-26934923	5	-	26931205	26931205	16724991	2	357,511,	0,3207,
#Partially deleted in new
chr10	26931205	26937859	chr10:26931205-26937859	5	-	26931205	26931205	16724991	4	357,104,203,1123,	0,3207,4219,5531,
#Partially deleted in new
chr10	26931205	26942001	chr10:26931205-26942001	5	-	26931205	26931205	16724991	5	357,104,203,250,2706,	0,3207,4219,5531,8090,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	26931246	26944418	chr10:26931246-26944418	7	-	26931246	26931246	16724991	5	316,104,203,169,476,	0,3166,4178,12076,12696,
#Partially deleted in new
chr10	26931275	26934516	chr10:26931275-26934516	5	-	26931275	26931275	16724991	2	287,104,	0,3137,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr10	27004115	27100498	chr10:27004115-27100498	1	-	27005589	27100326	789624	34	1608,46,229,218,291,130,113,94,71,153,957,138,184,214,142,34,171,179,71,73,29,94,62,130,203,61,73,147,31,71,107,174,115,414,	0,2801,8766,10378,13386,18442,20331,24736,25170,29109,30680,33070,33755,35849,39310,40041,42237,44685,49204,56229,56396,59872,62371,63041,73222,73517,74973,75916,78687,82423,88290,89233,89569,95969,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr10	27004297	27100492	chr10:27004297-27100492	3	-	27005589	27100326	789624	34	1426,46,229,218,291,130,113,94,71,153,957,138,184,214,142,34,171,179,71,73,29,99,94,62,130,203,61,73,31,71,107,174,115,408,	0,2619,8584,10196,13204,18260,20149,24554,24988,28927,30498,32888,33573,35667,39128,39859,42055,44503,49022,56047,56214,56846,59690,62189,62859,73040,73335,74791,78505,82241,88108,89051,89387,95787,
#Partially deleted in new
chr10	27037995	27046293	chr10:27037995-27046293	0	-	27037995	27037995	8553170	5	59,214,142,34,183,	0,1969,5430,6161,8115,
#Partially deleted in new
chr10	27066240	27077424	chr10:27066240-27077424	0	-	27066240	27066240	8553170	3	308,130,87,	0,916,11097,
#Partially deleted in new
chr10	27077022	27080720	chr10:27077022-27080720	0	-	27077022	27077022	8553170	4	518,61,73,72,	0,610,2066,3626,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	27088320	27088427	chr10:27088320-27088427	3	-	27088320	27088320	8553170	1	107,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr10	27110111	27154420	chr10:27110111-27154420	1	-	27111976	27154210	789624	18	2009,87,74,127,152,156,113,63,133,153,91,83,84,151,110,163,135,243,	0,4409,5948,6107,7464,9182,10323,11274,12729,13435,16584,21747,23927,24719,26164,35316,38794,44066,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr10	27110453	27154359	chr10:27110453-27154359	1	-	27111976	27154210	789624	20	1667,87,74,127,152,156,113,63,133,153,91,83,84,151,110,99,163,171,135,182,	0,4067,5606,5765,7122,8840,9981,10932,12387,13093,16242,21405,23585,24377,25822,31933,34974,37044,38452,43724,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr10	27110453	27154392	chr10:27110453-27154392	3	-	27111976	27154210	789624	19	1667,87,74,127,152,156,113,63,133,153,91,83,84,151,110,99,163,135,215,	0,4067,5606,5765,7122,8840,9981,10932,12387,13093,16242,21405,23585,24377,25822,31933,34974,38452,43724,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr10	27111733	27154356	chr10:27111733-27154356	1	-	27111881	27154210	789624	21	154,39,87,74,127,152,156,113,63,133,153,91,83,84,151,110,99,163,171,135,179,	0,348,2787,4326,4485,5842,7560,8701,9652,11107,11813,14962,20125,22305,23097,24542,30653,33694,35764,37172,42444,
#Partially deleted in new
chr10	27123546	27136337	chr10:27123546-27136337	0	-	27123546	27123546	8553170	7	153,91,121,83,84,151,62,	0,3149,5690,8312,10492,11284,12729,
#Partially deleted in new
chr10	27123546	27154392	chr10:27123546-27154392	0	-	27123546	27154210	789624	7	153,91,83,84,151,135,215,	0,3149,8312,10492,11284,25359,30631,
#Partially deleted in new
chr10	27131858	27154226	chr10:27131858-27154226	0	-	27131858	27154210	789624	7	83,84,151,110,163,135,49,	0,2180,2972,4417,13569,17047,22319,
#Partially deleted in new
chr10	27134043	27154371	chr10:27134043-27154371	0	-	27134043	27153235	789624	8	79,151,110,99,163,135,55,194,	0,787,2232,8343,11384,14862,19183,20134,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	27145418	27155266	chr10:27145418-27155266	1	-	27147425	27154210	789624	3	2250,135,1089,	0,3487,8759,
#Partially deleted in new
chr10	27154823	27186919	chr10:27154823-27186919	3	+	27155426	27186536	0	12	789,138,140,89,107,151,173,1140,139,114,102,541,	0,3725,4795,6270,10240,10565,12278,15120,18297,26129,26656,31555,
#Partially deleted in new
chr10	27155369	27186924	chr10:27155369-27186924	1	+	27155426	27186536	0	11	243,138,140,89,107,151,173,1140,139,102,546,	0,3179,4249,5724,9694,10019,11732,14574,17751,26110,31009,
#Partially deleted in new
chr10	27155369	27186919	chr10:27155369-27186919	1	+	27155426	27186536	0	12	243,138,140,89,107,151,173,1140,142,114,102,541,	0,3179,4249,5724,9694,10019,11732,14574,17748,25583,26110,31009,
#Partially deleted in new
chr10	27169943	27186718	chr10:27169943-27186718	0	+	27169943	27186536	789624	3	1140,142,340,	0,3174,16435,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	27193357	27193500	chr10:27193357-27193500	3	-	27193357	27193357	8553170	1	143,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	27195213	27240815	chr10:27195213-27240815	1	-	27197429	27240688	0	13	2229,110,51,200,268,107,204,135,115,73,121,166,142,	0,9226,9984,13032,15600,20321,22766,24509,28124,36534,39878,45105,45460,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	27195214	27240879	chr10:27195214-27240879	1	-	27197429	27240493	789624	12	2228,110,51,200,268,107,204,135,115,73,121,561,	0,9225,9983,13031,15599,20320,22765,24508,28123,36533,39877,45104,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	27195216	27242088	chr10:27195216-27242088	1	-	27197429	27231795	0	12	2226,110,51,200,268,107,204,135,115,73,166,30,	0,9223,9981,13029,15597,20318,22763,24506,28121,36531,45102,46842,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	27195216	27242130	chr10:27195216-27242130	3	-	27197429	27240394	0	13	2226,110,51,200,268,107,204,135,115,73,121,166,72,	0,9223,9981,13029,15597,20318,22763,24506,28121,36531,39875,45102,46842,
#Partially deleted in new
chr10	27197352	27240558	chr10:27197352-27240558	1	-	27197429	27240493	0	13	90,110,51,200,268,107,204,135,33,115,73,121,240,	0,7087,7845,10893,13461,18182,20627,22370,25854,25985,34395,37739,42966,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	27204446	27240582	chr10:27204446-27240582	0	-	27231791	27240493	789624	12	103,51,200,268,107,204,135,92,33,115,73,264,	0,751,3799,6367,11088,13533,15276,15926,18760,18891,27301,35872,
#Partially deleted in new
chr10	27217979	27240850	chr10:27217979-27240850	0	-	27217979	27240394	789624	8	204,135,33,115,73,121,156,177,	0,1743,5227,5358,13768,17112,22339,22694,
#Partially deleted in new
chr10	27217982	27242090	chr10:27217982-27242090	0	-	27217982	27240394	789624	8	201,135,33,115,73,121,166,32,	0,1740,5224,5355,13765,17109,22336,24076,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	27232254	27232316	chr10:27232254-27232316	3	-	27232254	27232254	8553170	1	62,	0,
#Partially deleted in new
chr10	27243129	27250804	chr10:27243129-27250804	3	+	27243129	27243129	8553170	2	255,747,	0,6928,
#Deleted in new
chr10	27246349	27251793	chr10:27246349-27251793	5	-	27246349	27246349	16724991	1	5444,	0,
#Deleted in new
chr10	27247300	27250562	chr10:27247300-27250562	4	-	27247300	27247300	16724991	1	3262,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	27250997	27259455	chr10:27250997-27259455	7	-	27250997	27250997	16724991	4	183,211,81,98,	0,303,6872,8360,
#Deleted in new
chr10	27251103	27251795	chr10:27251103-27251795	4	-	27251103	27251103	16724991	2	77,495,	0,197,
#Partially deleted in new
chr10	27258761	27288824	chr10:27258761-27288824	7	+	27258761	27258761	16724991	4	141,258,96,148,	0,4195,22526,29915,
#Partially deleted in new
chr10	27262956	27288824	chr10:27262956-27288824	5	+	27262956	27262956	16724991	4	258,210,91,148,	0,16113,18336,25720,
#Partially deleted in new
chr10	27313722	27316587	chr10:27313722-27316587	7	+	27313722	27313722	16724991	2	183,109,	0,2756,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	27315119	27315226	chr10:27315119-27315226	3	+	27315119	27315119	8553170	1	107,	0,
#Partially deleted in new
chr10	27331356	27341252	chr10:27331356-27341252	7	-	27331356	27331356	16724991	6	210,65,138,107,174,114,	0,2813,5478,7474,9446,9782,
#Deleted in new
chr10	27335500	27335607	chr10:27335500-27335607	3	-	27335500	27335500	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	27343435	27344917	chr10:27343435-27344917	3	+	27343435	27343435	8553170	2	1216,179,	0,1303,
#Deleted in new
chr10	27349716	27350290	chr10:27349716-27350290	7	-	27349716	27349716	16724991	1	574,	0,
#Partially deleted in new
chr10	27378137	27378362	chr10:27378137-27378362	7	-	27378137	27378137	16724991	1	225,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	27397120	27414368	chr10:27397120-27414368	1	-	27397732	27414250	8553170	4	2120,146,122,1207,	0,6091,14687,16041,
#Partially deleted in new
chr10	27398187	27414368	chr10:27398187-27414368	3	-	27398293	27414250	789624	4	1053,146,122,1207,	0,5024,13620,14974,
#Partially deleted in new
chr10	27398280	27414368	chr10:27398280-27414368	1	-	27398280	27414250	789624	5	73,172,146,122,1207,	0,788,4931,13527,14881,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	27504173	27542237	chr10:27504173-27542237	1	+	27504369	27538051	0	5	264,56,62,67,4362,	0,5701,22654,29754,33702,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	27504173	27542237	chr10:27504173-27542237	1	+	27504369	27538051	789624	6	264,46,73,119,67,4362,	0,5701,28333,29561,29754,33702,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	27504267	27542214	chr10:27504267-27542214	3	+	27504369	27538051	0	7	170,56,62,73,119,67,4339,	0,5607,22560,28239,29467,29660,33608,
#Partially deleted in new
chr10	27504298	27510490	chr10:27504298-27510490	0	+	27504298	27504298	8553170	2	114,616,	0,5576,
#Partially deleted in new
chr10	27504327	27538140	chr10:27504327-27538140	1	+	27504369	27538051	789624	5	110,56,119,67,265,	0,5547,29407,29600,33548,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	27504369	27542237	chr10:27504369-27542237	1	+	27504369	27538051	0	8	68,56,62,87,73,119,67,4362,	0,5505,22458,27159,28137,29365,29558,33506,
#Partially deleted in new
chr10	27504376	27538489	chr10:27504376-27538489	0	+	27504376	27504376	8553170	6	61,56,62,73,119,614,	0,5498,22451,28130,29358,33499,
#Partially deleted in new
chr10	27504393	27514217	chr10:27504393-27514217	0	+	27504393	27504393	8553170	3	44,56,255,	0,5481,9569,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	27504618	27537966	chr10:27504618-27537966	0	+	27504618	27537966	789624	9	106,212,56,62,87,73,119,67,91,	0,360,5256,22209,26910,27888,29116,29309,33257,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	27564429	27594588	chr10:27564429-27594588	3	+	27564429	27564429	8553170	4	2508,147,343,628,	0,5357,13941,29531,
#Partially deleted in new
chr10	27672874	27746060	chr10:27672874-27746060	3	-	27675228	27743415	789624	7	2541,34,336,154,160,267,354,	0,2646,61581,62346,68470,70353,72832,
#Partially deleted in new
chr10	27672874	27745849	chr10:27672874-27745849	1	-	27675228	27743415	789624	7	2541,34,336,154,160,270,143,	0,2646,61581,62346,68470,70353,72832,
#Partially deleted in new
chr10	27718562	27743545	chr10:27718562-27743545	0	-	27718562	27743415	789624	5	34,336,154,160,318,	0,15893,16658,22782,24665,
#Deleted in new
chr10	27743241	27745594	chr10:27743241-27745594	0	-	27743241	27743415	789624	2	256,175,	0,2178,
#Partially deleted in new
chr10	27744785	27767794	chr10:27744785-27767794	0	+	27744785	27744785	789624	2	163,437,	0,22572,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	27761588	27767793	chr10:27761588-27767793	3	+	27761588	27761588	8553170	3	186,123,436,	0,3062,5769,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	27783845	27784053	chr10:27783845-27784053	3	-	27783845	27783845	8553170	1	208,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	27812163	27836163	chr10:27812163-27836163	0	-	27812163	27812163	8553170	2	462,183,	0,23817,
#Partially deleted in new
chr10	27812167	27999048	chr10:27812167-27999048	3	-	27812511	27995142	789624	20	458,222,189,115,243,155,111,243,210,147,148,96,206,117,137,107,193,158,262,55,	0,48457,50266,95495,122842,124558,127729,128395,132054,132648,149400,156755,158940,169298,171675,172016,172851,175218,182751,186826,
#Deleted in new
chr10	27812169	27813442	chr10:27812169-27813442	0	-	27812169	27812169	8553170	2	456,170,	0,1103,
#Partially deleted in new
chr10	27904208	27905162	chr10:27904208-27905162	7	+	27904208	27904208	16724991	2	141,164,	0,790,
#Partially deleted in new
chr10	27944822	27981904	chr10:27944822-27981904	0	-	27944822	27944822	8553170	6	140,148,96,206,117,76,	0,16745,24100,26285,36643,37006,
#Partially deleted in new
chr10	27957048	27987449	chr10:27957048-27987449	0	-	27958870	27987449	789624	10	534,135,148,96,206,117,137,107,193,64,	0,1789,4519,11874,14059,24417,26794,27135,27970,30337,
#Partially deleted in new
chr10	27994971	27997514	chr10:27994971-27997514	0	-	27994971	27995142	789624	3	209,75,24,	0,677,2519,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	27999787	28049615	chr10:27999787-28049615	3	+	27999787	27999787	8553170	4	111,101,33,224,	0,22643,44136,49604,
#Deleted in new
chr10	28004701	28004932	chr10:28004701-28004932	7	+	28004701	28004701	16724991	1	231,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr10	28050992	28280142	chr10:28050992-28280142	1	-	28054064	28238604	0	18	3252,144,109,94,81,171,65,197,75,86,82,132,81,78,119,168,103,43,	0,5487,7502,8657,18779,38678,68658,69201,69601,73038,74017,80567,96490,98989,151160,187575,203781,229107,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr10	28050992	28282138	chr10:28050992-28282138	3	-	28054064	28238604	0	17	3252,144,109,94,81,171,65,197,75,86,82,132,81,78,119,168,129,	0,5487,7502,8657,18779,38678,68658,69201,69601,73038,74017,80567,96490,98989,151160,187575,231017,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr10	28051167	28238737	chr10:28051167-28238737	0	-	28059582	28238604	789624	16	3077,144,109,228,81,171,65,197,75,86,82,132,81,78,119,170,	0,5312,7327,8348,18604,38503,68483,69026,69426,72863,73842,80392,96315,98814,150985,187400,
#Partially deleted in new
chr10	28054060	28282089	chr10:28054060-28282089	1	-	28054064	28238604	0	19	184,144,109,94,81,171,65,197,75,86,82,132,81,78,119,168,103,41,80,	0,2419,4434,5589,15711,35610,65590,66133,66533,69970,70949,77499,93422,95921,148092,184507,200713,226039,227949,
#Partially deleted in new
chr10	28054142	28334486	chr10:28054142-28334486	0	-	28054142	28238604	789624	12	102,144,109,94,81,171,65,14,119,168,74,69,	0,2337,4352,5507,15629,35528,65508,66051,148010,184425,275786,280275,
#Partially deleted in new
chr10	28124071	28282106	chr10:28124071-28282106	0	-	28124071	28124071	8553170	9	45,82,132,81,78,119,168,41,97,	0,938,7488,23411,25910,78081,114496,156028,157938,
#Partially deleted in new
chr10	28125009	28203232	chr10:28125009-28203232	0	-	28125009	28125009	8553170	6	82,132,81,78,119,340,	0,6550,22473,24972,77143,77883,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	28236600	28238700	chr10:28236600-28238700	0	-	28236600	28236600	8553170	2	339,133,	0,1967,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	28289257	28289350	chr10:28289257-28289350	3	-	28289257	28289257	5263520	1	93,	0,
#Partially deleted in new
chr10	28303299	28307658	chr10:28303299-28307658	3	+	28303299	28303299	8553170	3	169,568,106,	0,2099,4253,
#Partially deleted in new
chr10	28338553	28340942	chr10:28338553-28340942	7	-	28338553	28338553	16724991	3	482,531,707,	0,816,1682,
#Deleted in new
chr10	28408038	28408251	chr10:28408038-28408251	3	-	28408038	28408038	8553170	1	213,	0,
#Partially deleted in new
chr10	28433007	28495813	chr10:28433007-28495813	3	-	28433007	28433007	789624	3	100,80,93,	0,3134,62713,
#Deleted in new
chr10	28436200	28437078	chr10:28436200-28437078	7	+	28436200	28436200	16724991	1	878,	0,
#Partially deleted in new
chr10	28442574	28442896	chr10:28442574-28442896	3	-	28442574	28442574	8553170	1	322,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	28522651	28532743	chr10:28522651-28532743	0	-	28522651	28522651	8553170	3	1960,61,302,	0,3296,9790,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	28522684	28532354	chr10:28522684-28532354	3	-	28522684	28522684	789624	3	1927,61,620,	0,3263,9050,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	28532492	28623112	chr10:28532492-28623112	1	+	28535618	28619606	789624	14	515,37,196,107,116,113,309,246,123,149,119,190,128,3576,	0,1505,3069,50906,57243,58227,63240,75693,78206,79281,82074,83680,85164,87044,
#Deleted in new
chr10	28532772	28535726	chr10:28532772-28535726	0	+	28535618	28535726	789624	3	235,185,165,	0,1225,2789,
#Deleted in new
chr10	28532775	28535960	chr10:28532775-28535960	0	+	28532775	28532775	8553170	4	232,37,196,42,	0,1222,2786,3143,
#Partially deleted in new
chr10	28532778	28537664	chr10:28532778-28537664	0	+	28532778	28532778	8553170	4	229,37,196,81,	0,1219,2783,4805,
#Partially deleted in new
chr10	28532783	28619976	chr10:28532783-28619976	1	+	28535618	28619606	789624	13	224,37,196,107,116,113,246,111,149,119,190,128,440,	0,1214,2778,50615,56952,57936,75402,77927,78990,81783,83389,84873,86753,
#Partially deleted in new
chr10	28533312	28620543	chr10:28533312-28620543	1	+	28533579	28619606	789624	13	308,37,196,107,116,113,246,123,149,119,190,128,1007,	0,685,2249,50086,56423,57407,74873,77386,78461,81254,82860,84344,86224,
#Partially deleted in new
chr10	28533418	28620543	chr10:28533418-28620543	3	+	28533579	28619606	789624	14	202,37,196,107,116,113,309,246,123,149,119,190,128,1007,	0,579,2143,49980,56317,57301,62314,74767,77280,78355,81148,82754,84238,86118,
#Partially deleted in new
chr10	28533505	28595870	chr10:28533505-28595870	0	+	28535618	28595870	789624	7	77,37,196,107,116,113,138,	0,492,2056,49893,56230,57214,62227,
#Partially deleted in new
chr10	28533539	28610710	chr10:28533539-28610710	0	+	28533579	28534260	789624	10	81,37,113,196,107,116,113,309,246,12,	0,458,694,2022,49859,56196,57180,62193,74646,77159,
#Partially deleted in new
chr10	28533539	28608433	chr10:28533539-28608433	1	+	28535610	28590796	789624	9	81,37,113,196,107,116,113,309,248,	0,458,694,2022,49859,56196,57180,62193,74646,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	28533596	28535968	chr10:28533596-28535968	0	+	28533596	28533596	8553170	3	24,37,407,	0,401,1965,
#Partially deleted in new
chr10	28533748	28595777	chr10:28533748-28595777	0	+	28535618	28595777	789624	7	145,37,196,107,116,113,45,	0,249,1813,49650,55987,56971,61984,
#Partially deleted in new
chr10	28533762	28583436	chr10:28533762-28583436	0	+	28535618	28583436	789624	3	272,196,38,	0,1799,49636,
#Partially deleted in new
chr10	28534122	28595956	chr10:28534122-28595956	0	+	28535618	28595956	789624	6	60,196,107,116,113,224,	0,1439,49276,55613,56597,61610,
#Partially deleted in new
chr10	28535265	28619979	chr10:28535265-28619979	0	+	28535618	28611412	789624	13	492,107,116,113,309,246,123,227,149,119,190,128,443,	0,48133,54470,55454,60467,72920,75433,75989,76508,79301,80907,82391,84271,
#Partially deleted in new
chr10	28535265	28619960	chr10:28535265-28619960	1	+	28535610	28590796	789624	13	492,107,116,113,309,246,123,227,149,119,187,128,424,	0,48133,54470,55454,60467,72920,75433,75989,76508,79301,80910,82391,84271,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	28535685	28619960	chr10:28535685-28619960	0	+	28535685	28535685	8553170	10	72,107,116,113,309,246,1215,1796,128,424,	0,47713,54050,55034,60047,72500,75022,78881,81971,83851,
#Partially deleted in new
chr10	28588736	28591833	chr10:28588736-28591833	0	+	28588736	28588736	8553170	2	1115,1114,	0,1983,
#Partially deleted in new
chr10	28595926	28608593	chr10:28595926-28608593	0	+	28595926	28595926	8553170	2	115,408,	0,12259,
#Partially deleted in new
chr10	28608345	28611591	chr10:28608345-28611591	0	+	28608345	28608345	8553170	3	86,123,337,	0,2353,2909,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	28614998	28618041	chr10:28614998-28618041	0	+	28614998	28614998	8553170	2	1364,385,	0,2658,
#Deleted in new
chr10	28652629	28652755	chr10:28652629-28652755	3	+	28652629	28652629	8553170	1	126,	0,
#Partially deleted in new
chr10	28658986	28659467	chr10:28658986-28659467	7	+	28658986	28658986	16724991	1	481,	0,
#Deleted in new
chr10	28677341	28682939	chr10:28677341-28682939	3	+	28677897	28682401	789624	3	632,288,957,	0,3916,4641,
#Deleted in new
chr10	28677509	28682677	chr10:28677509-28682677	0	+	28677509	28677509	8553170	2	464,1420,	0,3748,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	28743505	28941910	chr10:28743505-28941910	3	+	28743505	28743505	8553170	8	602,36,117,71,95,97,154,164,	0,129750,165858,183503,185415,189396,190130,198241,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	28743718	28933752	chr10:28743718-28933752	0	+	28743718	28743718	8553170	10	389,92,145,36,125,117,71,95,97,117,	0,62328,103400,129537,163721,165645,183290,185202,189183,189917,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	28743744	28744663	chr10:28743744-28744663	3	+	28743744	28743744	8553170	2	363,154,	0,765,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	28760698	28760803	chr10:28760698-28760803	3	-	28760698	28760698	8553170	1	105,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	28789187	28796006	chr10:28789187-28796006	3	-	28789187	28789187	789624	2	3757,234,	0,6585,
#Partially deleted in new
chr10	28792568	28796113	chr10:28792568-28796113	0	-	28792568	28792568	8553170	2	376,220,	0,3325,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	28792667	28793984	chr10:28792667-28793984	0	+	28792667	28792667	8553170	2	202,337,	0,980,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	28792667	28806054	chr10:28792667-28806054	0	+	28792667	28792667	8553170	6	202,222,178,147,151,8,	0,1244,9119,10232,12440,13379,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	28792667	28795376	chr10:28792667-28795376	0	-	28792667	28792667	8553170	2	277,660,	0,2049,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	28792802	28808219	chr10:28792802-28808219	1	+	28792802	28792802	8553170	6	67,222,178,92,91,330,	0,1109,8984,13244,14129,15087,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	28793676	28808127	chr10:28793676-28808127	0	+	28793676	28793676	8553170	5	457,173,92,91,238,	0,2275,12370,13255,14213,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	28806120	28813458	chr10:28806120-28813458	0	+	28806120	28806120	8553170	3	18,149,100,	0,6770,7238,
#Deleted in new
chr10	28812898	28813139	chr10:28812898-28813139	7	+	28812898	28812898	16724991	1	241,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	28846407	28881898	chr10:28846407-28881898	1	+	28846407	28846407	8553170	5	56,145,151,36,1761,	0,711,1808,26848,33730,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	28847240	28881895	chr10:28847240-28881895	0	+	28847240	28847240	8553170	4	23,151,36,1758,	0,975,26015,32897,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	28874392	28874507	chr10:28874392-28874507	7	-	28874392	28874392	16724991	1	115,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	28875597	28882311	chr10:28875597-28882311	0	+	28875597	28875597	8553170	2	425,2174,	0,4540,
#Deleted in new
chr10	28898995	28899484	chr10:28898995-28899484	7	-	28898995	28898995	16724991	1	489,	0,
#Partially deleted in new
chr10	29289060	29311228	chr10:29289060-29311228	1	+	29289117	29311059	789624	5	170,164,159,79,239,	0,2782,3458,21049,21929,
#Partially deleted in new
chr10	29289060	29311232	chr10:29289060-29311232	3	+	29291867	29311059	8553170	5	170,164,159,79,243,	0,2782,3458,21049,21929,
#Partially deleted in new
chr10	29291924	29318328	chr10:29291924-29318328	0	+	29291924	29317310	789624	5	82,159,79,139,178,	0,594,18185,25385,26226,
#Partially deleted in new
chr10	29409401	29458400	chr10:29409401-29458400	5	+	29409401	29409401	16724991	3	257,56,127,	0,5955,48872,
#Partially deleted in new
chr10	29409538	29487745	chr10:29409538-29487745	5	+	29409538	29409538	16724991	3	120,56,591,	0,5818,77616,
#Partially deleted in new
chr10	29409556	29420524	chr10:29409556-29420524	6	+	29409556	29409556	16724991	4	102,56,123,34,	0,5800,8625,10934,
#Partially deleted in new
chr10	29409556	29420750	chr10:29409556-29420750	4	+	29409556	29409556	16724991	4	127,56,123,260,	0,5800,8625,10934,
#Partially deleted in new
chr10	29409557	29483918	chr10:29409557-29483918	4	+	29409557	29409557	16724991	3	101,56,1086,	0,5799,73275,
#Partially deleted in new
chr10	29409571	29422372	chr10:29409571-29422372	4	+	29409571	29409571	16724991	3	87,56,1882,	0,5785,10919,
#Partially deleted in new
chr10	29409579	29483432	chr10:29409579-29483432	4	+	29409579	29409579	16724991	4	104,56,247,600,	0,5777,48694,73253,
#Partially deleted in new
chr10	29409585	29483185	chr10:29409585-29483185	4	+	29409585	29409585	16724991	3	98,56,353,	0,5771,73247,
#Partially deleted in new
chr10	29409590	29467278	chr10:29409590-29467278	4	+	29409590	29409590	16724991	3	93,56,39,	0,5766,57649,
#Partially deleted in new
chr10	29409596	29420748	chr10:29409596-29420748	4	+	29409596	29409596	16724991	3	87,56,258,	0,5760,10894,
#Partially deleted in new
chr10	29409601	29458787	chr10:29409601-29458787	4	+	29409601	29409601	16724991	3	82,56,514,	0,5755,48672,
#Partially deleted in new
chr10	29409617	29415412	chr10:29409617-29415412	5	+	29409617	29409617	16724991	2	66,56,	0,5739,
#Partially deleted in new
chr10	29410242	29469122	chr10:29410242-29469122	4	+	29410242	29410242	16724991	3	219,56,203,	0,5114,58677,
#Deleted in new
chr10	29421475	29422012	chr10:29421475-29422012	7	-	29421475	29421475	16724991	1	537,	0,
#Partially deleted in new
chr10	29457337	29735804	chr10:29457337-29735804	1	-	29458246	29555058	0	36	996,156,125,144,156,134,208,106,152,277,145,176,146,148,137,156,173,178,87,90,148,127,226,577,244,140,62,35,667,152,58,92,58,100,99,54,	0,1096,4939,6154,8257,10404,12938,13800,16500,23199,24246,27318,28747,29072,29825,31263,33509,35876,37576,37754,41778,55397,65072,66113,67134,72367,73269,73916,93259,97445,97713,105863,111917,200631,229215,278413,
#Partially deleted in new
chr10	29457347	29634972	chr10:29457347-29634972	1	-	29458246	29555058	0	37	986,156,125,144,156,134,208,106,152,277,145,176,146,148,137,156,173,178,87,90,148,127,226,577,244,140,62,35,171,930,81,667,152,58,92,58,553,	0,1086,4929,6144,8247,10394,12928,13790,16490,23189,24236,27308,28737,29062,29815,31253,33499,35866,37566,37744,41768,55387,65062,66103,67124,72357,73259,73906,74654,75181,78641,93249,97435,97703,105853,111907,177072,
#Partially deleted in new
chr10	29458058	29634972	chr10:29458058-29634972	3	-	29458246	29555058	0	38	275,156,125,144,156,134,208,106,152,277,145,176,146,148,137,156,173,178,87,90,148,127,226,577,244,96,140,62,35,171,930,81,667,152,58,92,58,553,	0,375,4218,5433,7536,9683,12217,13079,15779,22478,23525,26597,28026,28351,29104,30542,32788,35155,36855,37033,41057,54676,64351,65392,66413,68902,71646,72548,73195,73943,74470,77930,92538,96724,96992,105142,111196,176361,
#Partially deleted in new
chr10	29465615	29522527	chr10:29465615-29522527	0	-	29465615	29522527	789624	20	135,134,208,106,152,277,145,176,146,148,137,156,173,178,87,90,148,48,127,118,	0,2126,4660,5522,8222,14921,15968,19040,20469,20794,21547,22985,25231,27598,29298,29476,33500,42726,47119,56794,
#Partially deleted in new
chr10	29473533	29481655	chr10:29473533-29481655	0	-	29473533	29473533	8553170	5	154,152,137,264,72,	0,304,1821,7016,8050,
#Deleted in new
chr10	29484686	29486307	chr10:29484686-29486307	0	-	29484686	29484686	8553170	2	145,223,	0,1398,
#Partially deleted in new
chr10	29490846	29496490	chr10:29490846-29496490	0	-	29490846	29490846	8553170	5	173,178,87,90,94,	0,2367,4067,4245,5550,
#Partially deleted in new
chr10	29494979	29508536	chr10:29494979-29508536	0	-	29494979	29494979	8553170	4	21,90,148,195,	0,112,4136,13362,
#Partially deleted in new
chr10	29508030	29522568	chr10:29508030-29522568	0	-	29508030	29508030	8553170	3	359,127,159,	0,4704,14379,
#Partially deleted in new
chr10	29545003	29545097	chr10:29545003-29545097	3	-	29545003	29545003	5263520	1	94,	0,
#Partially deleted in new
chr10	29555089	29647255	chr10:29555089-29647255	0	-	29555089	29555089	8553170	4	19,92,58,93,	0,8111,14165,92073,
#Deleted in new
chr10	29575305	29575381	chr10:29575305-29575381	3	+	29575305	29575305	8553170	1	76,	0,
#Deleted in new
chr10	29602263	29602346	chr10:29602263-29602346	3	-	29602263	29602263	5263520	1	83,	0,
#Partially deleted in new
chr10	29657869	29686640	chr10:29657869-29686640	0	-	29657869	29657869	8553170	2	199,88,	0,28683,
#Partially deleted in new
chr10	29670981	29686622	chr10:29670981-29686622	0	-	29670981	29670981	8553170	2	120,70,	0,15571,
#Partially deleted in new
chr10	29686552	29736781	chr10:29686552-29736781	0	-	29686552	29686552	8553170	2	99,97,	0,50132,
#Deleted in new
chr10	29697934	29698174	chr10:29697934-29698174	7	+	29697934	29697934	16724991	1	240,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	29711914	29712008	chr10:29711914-29712008	3	+	29711914	29711914	8553170	1	94,	0,
#Deleted in new
chr10	29891031	29891467	chr10:29891031-29891467	7	-	29891031	29891031	16724991	1	436,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	30012799	30059524	chr10:30012799-30059524	3	-	30017882	30047812	789624	4	5118,3764,340,43,	0,13303,34732,46682,
#Partially deleted in new
chr10	30012802	30013918	chr10:30012802-30013918	0	-	30012802	30012802	8553170	2	248,436,	0,680,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	30047531	30115494	chr10:30047531-30115494	0	-	30047531	30047531	8553170	3	340,122,128,	0,22168,67835,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	30299568	30299673	chr10:30299568-30299673	3	-	30299568	30299568	8553170	1	105,	0,
#Deleted in new
chr10	30301822	30302072	chr10:30301822-30302072	7	-	30301822	30301822	16724991	1	250,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	30302825	30306066	chr10:30302825-30306066	3	-	30302825	30302825	8553170	1	3241,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	30309800	30349319	chr10:30309800-30349319	3	-	30313608	30349275	0	9	4171,74,93,227,212,225,225,173,201,	0,6162,6317,12590,16623,27002,30425,31667,39318,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	30309802	30312026	chr10:30309802-30312026	3	+	30309802	30309802	8553170	3	681,172,267,	0,860,1957,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr10	30313009	30374441	chr10:30313009-30374441	0	-	30313009	30313009	8553170	17	962,74,93,227,212,225,225,173,362,417,76,113,505,114,99,87,139,	0,2953,3108,9381,13414,23793,27216,28458,51696,52139,53341,54756,55136,56036,56317,56523,61293,
#Partially deleted in new
chr10	30326563	30348977	chr10:30326563-30348977	0	-	30326563	30341602	789624	5	72,225,225,173,121,	0,10239,13662,14904,22293,
#Partially deleted in new
chr10	30339971	30349161	chr10:30339971-30349161	0	-	30340213	30349161	789624	3	479,173,43,	0,1496,9147,
#Partially deleted in new
chr10	30353705	30357365	chr10:30353705-30357365	7	+	30353705	30353705	16724991	3	33,181,212,	0,2539,3448,
#Partially deleted in new
chr10	30364326	30374448	chr10:30364326-30374448	0	-	30364326	30364326	8553170	10	293,362,103,221,505,61,99,87,194,146,	0,379,822,1018,3819,4746,5000,5206,9333,9976,
#Partially deleted in new
chr10	30364409	30374386	chr10:30364409-30374386	7	-	30364409	30364409	16724991	14	193,362,103,114,54,110,199,476,99,84,27,75,93,60,	0,296,739,935,1102,1411,2140,3736,4917,5123,6307,6391,9363,9917,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	30366063	30366299	chr10:30366063-30366299	3	-	30366063	30366063	8553170	1	236,	0,
#Partially deleted in new
chr10	30368596	30368665	chr10:30368596-30368665	3	-	30368596	30368596	5263520	1	69,	0,
#Partially deleted in new
chr10	30380173	30381062	chr10:30380173-30381062	7	+	30380173	30380173	16724991	1	889,	0,
#Partially deleted in new
chr10	30383399	30383622	chr10:30383399-30383622	7	+	30383399	30383399	16724991	1	223,	0,
#Partially deleted in new
chr10	30403196	30403776	chr10:30403196-30403776	7	-	30403196	30403196	16724991	1	580,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	30433936	30461832	chr10:30433936-30461832	3	+	30438938	30460836	0	9	442,231,359,168,262,107,153,247,1127,	0,3239,4979,13845,16321,17701,24147,25318,26769,
#Partially deleted in new
chr10	30434020	30461833	chr10:30434020-30461833	1	+	30438938	30460836	0	8	358,359,168,262,107,153,247,1128,	0,4895,13761,16237,17617,24063,25234,26685,
#Partially deleted in new
chr10	30434140	30450518	chr10:30434140-30450518	0	+	30438938	30450518	789624	4	238,359,168,261,	0,4775,13641,16117,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	30434243	30439481	chr10:30434243-30439481	1	+	30438938	30439337	789624	3	135,231,566,	0,2932,4672,
#Partially deleted in new
chr10	30434664	30450422	chr10:30434664-30450422	0	+	30438938	30450422	789624	4	84,359,168,165,	0,4251,13117,15593,
#Partially deleted in new
chr10	30438821	30461833	chr10:30438821-30461833	1	+	30438938	30460836	0	7	453,168,262,107,153,247,1128,	0,8960,11436,12816,19262,20433,21884,
#Partially deleted in new
chr10	30439176	30450638	chr10:30439176-30450638	0	+	30439176	30439176	8553170	3	98,168,381,	0,8605,11081,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	30517615	30518861	chr10:30517615-30518861	7	-	30517615	30517615	16724991	2	476,487,	0,759,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	30553853	30554483	chr10:30553853-30554483	3	-	30553853	30553853	8553170	2	383,158,	0,472,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	30555600	30555904	chr10:30555600-30555904	3	-	30555600	30555600	8553170	1	304,	0,
#Partially deleted in new
chr10	30576698	30580182	chr10:30576698-30580182	3	+	30576698	30576698	8553170	2	139,239,	0,3245,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	30587705	30591092	chr10:30587705-30591092	3	+	30587705	30587705	8553170	4	81,92,156,1488,	0,448,1340,1899,
#Partially deleted in new
chr10	30611778	30629762	chr10:30611778-30629762	3	-	30611954	30626915	8553170	5	246,79,159,164,170,	0,1043,14326,14998,17814,
#Partially deleted in new
chr10	30611785	30629762	chr10:30611785-30629762	1	-	30611954	30629705	789624	5	239,79,159,164,170,	0,1036,14319,14991,17807,
#Deleted in new
chr10	30655488	30657535	chr10:30655488-30657535	5	+	30655488	30655488	16724991	3	223,57,206,	0,1080,1841,
#Partially deleted in new
chr10	30655650	30717266	chr10:30655650-30717266	7	+	30655650	30655650	16724991	19	61,114,148,90,87,178,173,156,137,125,146,176,145,277,156,141,126,156,84,	0,15915,29611,33588,33764,35423,37845,40271,41725,42466,42719,44436,47871,48762,53647,55711,56907,61276,61532,
#Partially deleted in new
chr10	30693661	30698463	chr10:30693661-30698463	4	+	30693661	30693661	16724991	4	138,156,137,94,	0,2260,3714,4708,
#Partially deleted in new
chr10	30723250	30723740	chr10:30723250-30723740	3	+	30723250	30723250	789624	2	86,322,	0,168,
#Partially deleted in new
chr10	30820206	30923388	chr10:30820206-30923388	0	-	30834181	30877034	789624	8	238,54,92,74,146,68,83,102,	0,9907,13914,15360,30015,56791,88726,103080,
#Deleted in new
chr10	30831827	30833387	chr10:30831827-30833387	3	-	30831827	30831827	8553170	1	1560,	0,
#Partially deleted in new
chr10	30844633	30984426	chr10:30844633-30984426	1	-	30844960	30857686	789624	8	940,1837,99,68,83,81,77,58,	0,3897,13046,32364,64299,65726,96941,139735,
#Partially deleted in new
chr10	30844633	30984426	chr10:30844633-30984426	1	-	30844960	30877034	789624	7	940,1837,68,83,81,77,58,	0,3897,32364,64299,65726,96941,139735,
#Partially deleted in new
chr10	30844637	31031937	chr10:30844637-31031937	1	-	30844960	30877034	789624	6	936,1837,68,83,77,105,	0,3893,32360,64295,96937,187195,
#Partially deleted in new
chr10	30844637	31031937	chr10:30844637-31031937	1	-	30844960	30877034	789624	7	936,1837,68,83,77,58,105,	0,3893,32360,64295,96937,139731,187195,
#Partially deleted in new
chr10	30844637	31031937	chr10:30844637-31031937	3	-	30844960	30877034	789624	8	936,1837,68,83,81,77,58,105,	0,3893,32360,64295,65722,96937,139731,187195,
#Partially deleted in new
chr10	30844637	31031937	chr10:30844637-31031937	1	-	30844960	30857686	789624	9	936,1837,99,68,83,81,77,58,105,	0,3893,13042,32360,64295,65722,96937,139731,187195,
#Partially deleted in new
chr10	30844771	30999517	chr10:30844771-30999517	1	-	30844960	30850257	789624	8	802,1837,179,68,83,77,58,180,	0,3759,30559,32226,64161,96803,139597,154566,
#Partially deleted in new
chr10	30844780	31031925	chr10:30844780-31031925	1	-	30844960	30849096	789624	7	793,913,146,68,83,77,93,	0,3750,5441,32217,64152,96794,187052,
#Partially deleted in new
chr10	30919011	30921235	chr10:30919011-30921235	7	-	30919011	30919011	16724991	2	595,1338,	0,886,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	31187882	31261910	chr10:31187882-31261910	3	+	31187882	31187882	789624	2	317,1929,	0,72099,
#Partially deleted in new
chr10	31206277	31319691	chr10:31206277-31319691	3	-	31206277	31206277	8553170	2	205,177,	0,113237,
#Deleted in new
chr10	31259598	31259704	chr10:31259598-31259704	7	+	31259598	31259598	16724991	1	106,	0,
#Partially deleted in new
chr10	31307716	31319035	chr10:31307716-31319035	1	-	31307716	31307716	789624	2	436,140,	0,11179,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	31307992	31318932	chr10:31307992-31318932	1	-	31307992	31307992	8553170	3	160,123,37,	0,1900,10903,
#Deleted in new
chr10	31316527	31319030	chr10:31316527-31319030	1	-	31316527	31316527	789624	1	2503,	0,
#Deleted in new
chr10	31318087	31319027	chr10:31318087-31319027	1	-	31318087	31318087	8553170	2	453,132,	0,808,
#Deleted in new
chr10	31318229	31320447	chr10:31318229-31320447	1	-	31318229	31318229	8553170	2	311,165,	0,2053,
#Deleted in new
chr10	31318357	31319062	chr10:31318357-31319062	1	-	31318357	31318357	8553170	2	380,179,	0,526,
#Deleted in new
chr10	31318441	31320351	chr10:31318441-31320351	1	-	31318441	31318441	8553170	2	535,38,	0,1872,
#Deleted in new
chr10	31318451	31319881	chr10:31318451-31319881	1	-	31318451	31318451	8553170	2	89,367,	0,1063,
#Partially deleted in new
chr10	31318494	31529202	chr10:31318494-31529202	0	+	31318494	31318494	8553170	13	86,221,156,162,143,201,63,162,203,106,1811,181,2531,	0,418,54523,56308,68629,142542,177281,183853,192178,196108,201631,205438,208177,
#Partially deleted in new
chr10	31318782	31502447	chr10:31318782-31502447	0	+	31318782	31318782	8553170	6	351,156,143,201,63,100,	0,54235,68341,142254,176993,183565,
#Partially deleted in new
chr10	31318817	31527276	chr10:31318817-31527276	0	+	31318817	31318817	8553170	9	316,201,60,162,203,106,1811,181,605,	0,142219,176961,183530,191855,195785,201308,205115,207854,
#Partially deleted in new
chr10	31318836	31514681	chr10:31318836-31514681	0	+	31318836	31318836	8553170	9	297,156,143,79,201,63,162,203,79,	0,54181,68287,68883,142200,176939,183511,191836,195766,
#Partially deleted in new
chr10	31319124	31529202	chr10:31319124-31529202	3	+	31319234	31527264	0	9	168,201,60,162,203,106,1811,181,2531,	0,141912,176654,183223,191548,195478,201001,204808,207547,
#Partially deleted in new
chr10	31319171	31529813	chr10:31319171-31529813	1	+	31319234	31527264	0	9	121,201,63,162,203,106,1811,181,3142,	0,141865,176604,183176,191501,195431,200954,204761,207500,
#Partially deleted in new
chr10	31319211	31524007	chr10:31319211-31524007	0	+	31319211	31319211	8553170	9	81,46,201,60,162,203,106,1811,75,	0,35935,141825,176567,183136,191461,195391,200914,204721,
#Partially deleted in new
chr10	31319211	31527294	chr10:31319211-31527294	1	+	31319234	31527264	0	8	81,201,162,203,106,1811,181,623,	0,141825,183136,191461,195391,200914,204721,207460,
#Partially deleted in new
chr10	31319212	31520421	chr10:31319212-31520421	0	+	31319234	31520421	789624	5	80,201,203,106,296,	0,141824,191460,195390,200913,
#Partially deleted in new
chr10	31319215	31520200	chr10:31319215-31520200	0	+	31319234	31520200	789624	7	77,201,63,162,203,106,75,	0,141821,176560,183132,191457,195387,200910,
#Partially deleted in new
chr10	31319215	31529814	chr10:31319215-31529814	0	+	31319234	31373121	789624	11	77,156,143,201,63,162,203,106,1811,181,3143,	0,53802,67908,141821,176560,183132,191457,195387,200910,204717,207456,
#Partially deleted in new
chr10	31319221	31527294	chr10:31319221-31527294	1	+	31319234	31527264	0	8	71,60,162,203,106,1811,181,623,	0,176557,183126,191451,195381,200904,204711,207450,
#Partially deleted in new
chr10	31320112	31520811	chr10:31320112-31520811	0	+	31320112	31320112	8553170	7	95,49,60,156,203,106,686,	0,35031,175666,182241,190560,194490,200013,
#Partially deleted in new
chr10	31320125	31520811	chr10:31320125-31520811	0	+	31510845	31520811	789624	7	82,201,60,162,203,106,686,	0,140911,175653,182222,190547,194477,200000,
#Partially deleted in new
chr10	31320546	31524007	chr10:31320546-31524007	0	+	31320546	31320546	8553170	8	152,201,63,162,203,106,1811,75,	0,140490,175229,181801,190126,194056,199579,203386,
#Partially deleted in new
chr10	31320605	31514707	chr10:31320605-31514707	0	+	31320605	31320605	8553170	7	93,143,201,63,162,203,105,	0,66518,140431,175170,181742,190067,193997,
#Partially deleted in new
chr10	31321134	31529813	chr10:31321134-31529813	1	+	31321525	31527264	0	9	398,201,63,162,203,106,1811,181,3142,	0,139902,174641,181213,189538,193468,198991,202798,205537,
#Partially deleted in new
chr10	31321134	31514657	chr10:31321134-31514657	0	+	31321134	31321134	8553170	8	398,156,143,201,63,162,203,55,	0,51883,65989,139902,174641,181213,189538,193468,
#Partially deleted in new
chr10	31321151	31520214	chr10:31321151-31520214	0	+	31321525	31520214	789624	7	381,201,63,162,203,106,89,	0,139885,174624,181196,189521,193451,198974,
#Partially deleted in new
chr10	31321473	31514651	chr10:31321473-31514651	0	+	31321473	31321473	8553170	7	59,143,201,60,162,203,49,	0,65650,139563,174305,180874,189199,193129,
#Partially deleted in new
chr10	31321620	31502423	chr10:31321620-31502423	0	+	31321620	31321620	8553170	4	231,201,63,76,	0,139416,174155,180727,
#Partially deleted in new
chr10	31321689	31502406	chr10:31321689-31502406	0	+	31321689	31321689	8553170	4	162,201,60,59,	0,139347,174089,180658,
#Partially deleted in new
chr10	31322009	31358590	chr10:31322009-31358590	0	+	31322009	31322009	8553170	3	75,49,446,	0,33134,36135,
#Partially deleted in new
chr10	31355143	31461236	chr10:31355143-31461236	0	+	31355143	31355143	8553170	6	49,156,143,79,56,200,	0,17874,31980,32576,34461,105893,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	31360954	31361215	chr10:31360954-31361215	7	+	31360954	31360954	16724991	1	261,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	31362798	31364049	chr10:31362798-31364049	7	-	31362798	31362798	16724991	1	1251,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	31381722	31461180	chr10:31381722-31461180	0	+	31381722	31381722	8553170	5	107,143,79,91,144,	0,5401,5997,7882,79314,
#Partially deleted in new
chr10	31602861	31606214	chr10:31602861-31606214	3	+	31602861	31602861	8553170	4	458,159,97,289,	0,1394,1769,3064,
#Deleted in new
chr10	31604599	31606218	chr10:31604599-31606218	0	+	31604599	31604599	8553170	2	128,293,	0,1326,
#Deleted in new
chr10	31628539	31628599	chr10:31628539-31628599	7	-	31628539	31628539	16724991	1	60,	0,
#Partially deleted in new
chr10	31693083	31707388	chr10:31693083-31707388	3	-	31693083	31693083	8553170	2	264,83,	0,14222,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	31756041	31756136	chr10:31756041-31756136	3	-	31756041	31756041	8553170	1	95,	0,
#Partially deleted in new
chr10	31805403	31928876	chr10:31805403-31928876	1	-	31807657	31908855	789624	19	2429,103,135,78,99,117,103,99,102,82,62,15,75,126,81,264,755,39,194,	0,3245,3590,3826,5245,7303,8855,12384,14983,20900,26335,33901,34233,38057,47113,55991,102768,105121,123279,
#Partially deleted in new
chr10	31805403	31928876	chr10:31805403-31928876	1	-	31807657	31908855	789624	19	2429,103,135,78,99,117,103,99,102,82,62,75,126,81,141,264,755,39,194,	0,3245,3590,3826,5245,7303,8855,12384,14983,20900,26335,34233,38057,47113,48662,55991,102768,105121,123279,
#Partially deleted in new
chr10	31805436	31908874	chr10:31805436-31908874	1	-	31807657	31908855	789624	16	2396,103,135,78,99,117,103,99,102,82,62,75,126,81,264,703,	0,3212,3557,3793,5212,7270,8822,12351,14950,20867,26302,34200,38024,47080,55958,102735,
#Partially deleted in new
chr10	31805436	31928814	chr10:31805436-31928814	1	-	31807657	31908855	789624	18	2396,103,135,78,99,117,103,99,102,82,62,126,81,141,264,755,39,132,	0,3212,3557,3793,5212,7270,8822,12351,14950,20867,26302,38024,47080,48629,55958,102735,105088,123246,
#Partially deleted in new
chr10	31805713	31826974	chr10:31805713-31826974	0	-	31805713	31805713	8553170	11	2119,103,135,78,99,117,103,99,102,82,190,	0,2935,3280,3516,4935,6993,8545,12074,14673,20590,21071,
#Deleted in new
chr10	31806290	31808551	chr10:31806290-31808551	0	-	31806290	31806290	8553170	2	1542,99,	0,2162,
#Deleted in new
chr10	31806293	31809685	chr10:31806293-31809685	0	-	31806293	31806293	8553170	3	1539,103,692,	0,2355,2700,
#Partially deleted in new
chr10	31806305	31928807	chr10:31806305-31928807	3	-	31807657	31908855	789624	20	1527,103,135,78,99,117,103,99,102,82,62,15,75,126,81,141,264,755,39,125,	0,2343,2688,2924,4343,6401,7953,11482,14081,19998,25433,32999,33331,37155,46211,47760,55089,101866,104219,122377,
#Partially deleted in new
chr10	31812635	31843556	chr10:31812635-31843556	0	-	31812635	31812635	8553170	7	188,103,99,102,82,62,96,	0,1623,5152,7751,13668,19103,30825,
#Partially deleted in new
chr10	31820443	31854180	chr10:31820443-31854180	0	-	31820443	31854180	789624	7	45,82,62,75,126,81,115,	0,5860,11295,19193,23017,32073,33622,
#Deleted in new
chr10	31913142	31913754	chr10:31913142-31913754	7	+	31913142	31913142	16724991	1	612,	0,
#Partially deleted in new
chr10	31983884	31984554	chr10:31983884-31984554	7	+	31983884	31983884	16724991	2	63,279,	0,391,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	31992086	31992381	chr10:31992086-31992381	3	-	31992086	31992086	8553170	1	295,	0,
#Partially deleted in new
chr10	32009009	32056431	chr10:32009009-32056431	3	-	32015528	32055973	0	26	2507,151,217,105,72,61,102,110,62,118,189,144,207,69,194,149,146,105,125,88,56,49,105,74,88,584,	0,6499,8133,9042,9306,9492,10848,12012,12216,13130,13838,19418,22063,23696,24835,25680,26512,26880,28244,28510,29153,29768,30317,31374,39454,46838,
#Partially deleted in new
chr10	32017206	32021094	chr10:32017206-32021094	0	-	32017206	32017206	8553170	5	153,105,61,102,73,	0,845,1295,2651,3815,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	32056745	32056839	chr10:32056745-32056839	3	+	32056745	32056745	8553170	1	94,	0,
#Deleted in new
chr10	32102521	32103293	chr10:32102521-32103293	7	-	32102521	32102521	16724991	1	772,	0,
#Partially deleted in new
chr10	32109860	32111666	chr10:32109860-32111666	7	+	32109860	32109860	16724991	2	565,114,	0,1692,
#Partially deleted in new
chr10	32111643	32111789	chr10:32111643-32111789	7	-	32111643	32111643	16724991	1	146,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	32173683	32173744	chr10:32173683-32173744	3	+	32173683	32173683	8553170	1	61,	0,
#Deleted in new
chr10	32188322	32188817	chr10:32188322-32188817	7	-	32188322	32188322	16724991	1	495,	0,
#Partially deleted in new
chr10	32231848	32232245	chr10:32231848-32232245	7	-	32231848	32231848	16724991	1	397,	0,
#Partially deleted in new
chr10	32266288	32269474	chr10:32266288-32269474	3	+	32266288	32266288	8553170	2	122,574,	0,2612,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	32266329	32269075	chr10:32266329-32269075	0	+	32266329	32266329	8553170	4	81,306,107,175,	0,355,2178,2571,
#Partially deleted in new
chr10	32267750	32347218	chr10:32267750-32347218	3	-	32269062	32346915	789624	14	1385,364,142,119,353,149,90,177,160,149,207,146,160,456,	0,3803,4275,5412,16947,18943,19175,19347,23412,24745,25237,25841,38021,79012,
#Partially deleted in new
chr10	32267750	32378798	chr10:32267750-32378798	1	-	32269062	32378493	789624	14	1385,364,142,119,353,149,90,177,160,149,207,146,160,308,	0,3803,4275,5412,16947,18943,19175,19347,23412,24745,25237,25841,38021,110740,
#Partially deleted in new
chr10	32268930	32347185	chr10:32268930-32347185	1	-	32269062	32346915	789624	15	205,364,142,69,119,353,149,90,177,160,149,207,146,160,423,	0,2623,3095,4083,4232,15767,17763,17995,18167,22232,23565,24057,24661,36841,77832,
#Deleted in new
chr10	32271553	32272249	chr10:32271553-32272249	0	-	32271553	32271553	8553170	2	364,224,	0,472,
#Deleted in new
chr10	32271713	32273217	chr10:32271713-32273217	0	-	32271713	32271713	8553170	3	204,142,204,	0,312,1300,
#Partially deleted in new
chr10	32272141	32286978	chr10:32272141-32286978	0	-	32272141	32272141	8553170	6	26,119,117,353,149,53,	0,1021,1780,12556,14552,14784,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	32281858	32346819	chr10:32281858-32346819	0	-	32281858	32281858	8553170	7	5157,177,1482,207,146,160,57,	0,5239,9304,11129,11733,23913,64904,
#Deleted in new
chr10	32345111	32347218	chr10:32345111-32347218	0	-	32345111	32345111	789624	2	451,456,	0,1651,
#Deleted in new
chr10	32345391	32347121	chr10:32345391-32347121	0	-	32345391	32345391	8553170	2	232,359,	0,1371,
#Deleted in new
chr10	32346498	32347179	chr10:32346498-32347179	3	+	32346498	32346498	8553170	2	38,345,	0,336,
#Partially deleted in new
chr10	32347396	32374488	chr10:32347396-32374488	3	+	32347396	32347396	789624	2	79,186,	0,26906,
#Partially deleted in new
chr10	32377112	32378614	chr10:32377112-32378614	0	-	32377112	32377112	8553170	2	323,124,	0,1378,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	32394557	32394665	chr10:32394557-32394665	3	-	32394557	32394557	8553170	1	108,	0,
#Partially deleted in new
chr10	32446139	32574564	chr10:32446139-32574564	1	+	32451642	32574435	789624	18	258,330,93,84,21,33,167,62,57,76,31,90,86,55,63,222,35,136,	0,5452,7204,10111,16543,16877,24924,26341,27827,45782,71805,72276,97160,98107,119418,121530,125719,128289,
#Partially deleted in new
chr10	32446139	32574564	chr10:32446139-32574564	3	+	32451642	32574435	789624	18	492,330,93,84,21,33,167,62,57,76,31,90,86,55,63,222,35,136,	0,5452,7204,10111,16543,16877,24924,26341,27827,45782,71805,72276,97160,98107,119418,121530,125719,128289,
#Partially deleted in new
chr10	32446139	32574560	chr10:32446139-32574560	0	+	32451642	32517952	789624	17	258,330,93,84,21,33,167,62,57,31,90,86,55,63,222,35,132,	0,5452,7204,10111,16543,16877,24924,26341,27827,71805,72276,97160,98107,119418,121530,125719,128289,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	32446386	32514584	chr10:32446386-32514584	0	+	32451642	32472486	789624	9	245,330,93,84,21,33,62,57,3076,	0,5205,6957,9864,16296,16630,26094,27580,65122,
#Partially deleted in new
chr10	32451620	32518433	chr10:32451620-32518433	1	+	32451642	32472486	789624	9	301,93,84,21,33,62,57,31,18,	0,1723,4630,11062,11396,20860,22346,66324,66795,
#Partially deleted in new
chr10	32451620	32518433	chr10:32451620-32518433	1	+	32451642	32491939	789624	8	301,93,84,21,33,76,31,18,	0,1723,4630,11062,11396,40301,66324,66795,
#Partially deleted in new
chr10	32451620	32518433	chr10:32451620-32518433	1	+	32451642	32517956	789624	7	301,93,84,21,33,31,18,	0,1723,4630,11062,11396,66324,66795,
#Partially deleted in new
chr10	32451642	32876393	chr10:32451642-32876393	1	+	32451642	32876393	789624	42	279,93,84,21,33,167,62,57,76,31,90,86,55,63,222,35,274,73,111,102,108,111,111,114,111,99,111,126,108,84,84,87,84,84,84,84,84,84,123,126,90,47,	0,1701,4608,11040,11374,19421,20838,22324,40279,66302,66773,91657,92604,113915,116027,120216,131391,132589,182611,183414,212411,234327,237410,243236,259977,275091,277244,277689,327334,353372,362727,372875,383172,393600,393900,394233,394733,396190,396953,400164,402757,424704,
#Deleted in new
chr10	32511335	32511737	chr10:32511335-32511737	7	-	32511335	32511335	16724991	1	402,	0,
#Partially deleted in new
chr10	32512464	32543386	chr10:32512464-32543386	0	+	32512464	32512464	8553170	4	212,31,90,87,	0,5480,5951,30835,
#Partially deleted in new
chr10	32543299	32574484	chr10:32543299-32574484	0	+	32543299	32574484	789624	5	86,55,63,222,56,	0,947,22258,24370,31129,
#Deleted in new
chr10	32543325	32544437	chr10:32543325-32544437	0	+	32543325	32543325	8553170	2	60,191,	0,921,
#Partially deleted in new
chr10	32567722	32882874	chr10:32567722-32882874	0	+	32567722	32583054	789624	23	169,274,73,111,111,114,111,99,111,126,84,84,87,84,84,84,84,84,123,126,90,234,182,	0,15311,16509,118247,121330,127156,143897,159011,161164,161609,237292,246647,256795,267092,277820,278153,278653,280110,280873,284084,286677,308624,314970,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr10	32567835	32876553	chr10:32567835-32876553	0	+	32567835	32686002	789624	21	56,99,111,111,111,99,111,126,84,84,87,84,84,84,84,84,84,123,126,90,207,	0,55883,118134,121217,143784,158898,161051,161496,237179,246534,256682,266979,277407,277707,278040,278540,279997,280760,283971,286564,308511,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr10	32567835	32876553	chr10:32567835-32876553	0	+	32567835	32567835	8553170	23	56,35,98,274,73,149,111,111,114,111,99,111,126,108,84,84,84,84,84,123,126,90,207,	0,4023,6593,15198,16396,107829,118134,121217,127043,143784,158898,161051,161496,211141,266979,277707,278040,278540,279997,280760,283971,286564,308511,
#Partially deleted in new
chr10	32686018	32877139	chr10:32686018-32877139	0	+	32686018	32876393	789624	21	62,111,114,111,99,66,126,108,84,84,87,84,84,84,84,84,84,123,126,90,793,	0,3034,8860,25601,40715,42913,43313,92958,118996,128351,138499,148796,159224,159524,159857,160357,161814,162577,165788,168381,190328,
#Deleted in new
chr10	32887254	32889311	chr10:32887254-32889311	3	-	32887254	32887254	8553170	1	2057,	0,
#Partially deleted in new
chr10	32900318	32957894	chr10:32900318-32957894	1	-	32901569	32935558	0	16	1317,167,233,223,239,200,141,90,96,156,239,171,223,86,67,136,	0,8049,9904,11129,11567,19566,19926,21938,22321,23266,25552,27775,29503,32196,35173,57440,
#Partially deleted in new
chr10	32900318	32935558	chr10:32900318-32935558	1	-	32907068	32935558	0	16	1317,81,167,233,223,239,200,141,90,96,156,239,171,223,86,67,	0,6744,8049,9904,11129,11567,19566,19926,21938,22321,23266,25552,27775,29503,32196,35173,
#Partially deleted in new
chr10	32900391	32958209	chr10:32900391-32958209	3	-	32901569	32935558	0	16	1244,167,233,223,239,200,141,90,96,156,239,171,223,86,67,65,	0,7976,9831,11056,11494,19493,19853,21865,22248,23193,25479,27702,29430,32123,35100,57753,
#Partially deleted in new
chr10	32900991	32908503	chr10:32900991-32908503	0	-	32907068	32908503	789624	3	644,81,136,	0,6071,7376,
#Partially deleted in new
chr10	32901563	32912064	chr10:32901563-32912064	0	-	32908532	32912064	789624	4	72,167,144,179,	0,6804,9963,10322,
#Partially deleted in new
chr10	32925960	32958218	chr10:32925960-32958218	0	-	32925960	32925960	8553170	5	149,204,86,67,74,	0,3880,6554,9531,32184,
#Partially deleted in new
chr10	32928149	32955663	chr10:32928149-32955663	0	-	32928149	32935558	789624	5	115,223,86,67,94,	0,1672,4365,7342,27420,
#Partially deleted in new
chr10	32928173	32958232	chr10:32928173-32958232	0	-	32928173	32930026	789624	6	91,223,86,233,67,88,	0,1648,4341,5177,7318,29971,
#Partially deleted in new
chr10	32928192	32958227	chr10:32928192-32958227	0	-	32928192	32935558	789624	5	72,223,95,67,83,	0,1629,4313,7299,29952,
#Partially deleted in new
chr10	32928231	32957794	chr10:32928231-32957794	0	-	32928231	32935558	789624	5	33,223,86,67,36,	0,1590,4283,7260,29527,
#Partially deleted in new
chr10	32929823	33005792	chr10:32929823-33005792	0	-	32929823	32935558	789624	4	221,86,67,178,	0,2691,5668,75791,
#Partially deleted in new
chr10	32929884	32963283	chr10:32929884-32963283	0	-	32929884	32935558	789624	6	160,86,67,77,53,103,	0,2630,5607,30405,31223,33296,
#Partially deleted in new
chr10	32929928	32958227	chr10:32929928-32958227	0	-	32929928	32935558	789624	5	116,86,67,217,83,	0,2586,5563,23664,28216,
#Partially deleted in new
chr10	32929931	32932717	chr10:32929931-32932717	0	-	32929931	32929931	8553170	2	113,203,	0,2583,
#Partially deleted in new
chr10	32929933	32935558	chr10:32929933-32935558	0	-	32929933	32930026	789624	4	111,86,102,67,	0,2581,3548,5558,
#Partially deleted in new
chr10	32932520	32958196	chr10:32932520-32958196	0	-	32932520	32935558	789624	5	80,67,84,217,52,	0,2971,19154,21072,25624,
#Deleted in new
chr10	32944480	32944999	chr10:32944480-32944999	7	+	32944480	32944480	16724991	1	519,	0,
#Deleted in new
chr10	32958485	32960503	chr10:32958485-32960503	0	-	32958485	32958485	8553170	2	401,179,	0,1839,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	32958844	33082102	chr10:32958844-33082102	3	+	32958844	32958844	8553170	4	59,93,135,761,	0,2125,26778,122497,
#Deleted in new
chr10	33023367	33023647	chr10:33023367-33023647	7	-	33023367	33023367	16724991	1	280,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	33034654	33034924	chr10:33034654-33034924	3	-	33034654	33034654	8553170	1	270,	0,
#Deleted in new
chr10	33035468	33035664	chr10:33035468-33035664	7	-	33035468	33035468	16724991	1	196,	0,
#Partially deleted in new
chr10	33057614	33058407	chr10:33057614-33058407	7	-	33057614	33057614	16724991	1	793,	0,
#Partially deleted in new
chr10	33096256	33116672	chr10:33096256-33116672	3	-	33096256	33096256	8553170	2	350,202,	0,20214,
#Partially deleted in new
chr10	33177491	33336262	chr10:33177491-33336262	3	-	33180075	33334382	0	18	2874,51,97,272,138,60,105,145,332,145,156,167,156,228,182,175,531,68,	0,5206,8136,8725,14789,20158,25399,30080,35894,44227,48642,76536,78824,86154,93183,153216,156818,158703,
#Partially deleted in new
chr10	33177491	33334636	chr10:33177491-33334636	1	-	33180075	33263760	789624	16	2874,51,97,272,138,60,84,145,332,145,156,167,156,228,175,327,	0,5206,8136,8725,14789,20158,25420,30080,35894,44227,48642,76536,78824,86154,153216,156818,
#Partially deleted in new
chr10	33177493	33334905	chr10:33177493-33334905	1	-	33180075	33334382	0	17	2872,51,97,272,138,60,105,145,332,145,156,167,156,228,182,175,596,	0,5204,8134,8723,14787,20156,25397,30078,35892,44225,48640,76534,78822,86152,93181,153214,156816,
#Partially deleted in new
chr10	33177493	33334905	chr10:33177493-33334905	1	-	33180075	33334382	789624	16	2872,97,272,138,60,105,145,332,145,156,167,156,228,182,175,596,	0,8134,8723,14787,20156,25397,30078,35892,44225,48640,76534,78822,86152,93181,153214,156816,
#Partially deleted in new
chr10	33179896	33185655	chr10:33179896-33185655	0	-	33180075	33185655	789624	2	469,28,	0,5731,
#Partially deleted in new
chr10	33194366	33202995	chr10:33194366-33202995	0	-	33194712	33202995	789624	3	414,60,105,	0,3283,8524,
#Partially deleted in new
chr10	33194371	33213561	chr10:33194371-33213561	0	-	33194712	33213561	789624	2	353,170,	0,19020,
#Partially deleted in new
chr10	33195423	33207625	chr10:33195423-33207625	0	-	33195493	33207625	789624	4	153,60,105,54,	0,2226,7467,12148,
#Partially deleted in new
chr10	33197620	33334522	chr10:33197620-33334522	1	-	33197638	33334382	0	11	89,145,332,145,156,167,156,228,182,175,213,	0,9951,15765,24098,28513,56407,58695,66025,73054,133087,136689,
#Partially deleted in new
chr10	33197620	33334642	chr10:33197620-33334642	1	-	33197638	33334382	0	12	89,105,145,332,145,156,167,156,228,182,175,333,	0,5270,9951,15765,24098,28513,56407,58695,66025,73054,133087,136689,
#Partially deleted in new
chr10	33201017	33334382	chr10:33201017-33334382	1	-	33202639	33334382	789624	11	1978,145,332,145,156,167,156,228,182,175,73,	0,6554,12368,20701,25116,53010,55298,62628,69657,129690,133292,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	33205448	33334522	chr10:33205448-33334522	1	-	33206186	33334382	789624	11	905,145,332,145,156,167,156,228,182,175,213,	0,2123,7937,16270,20685,48579,50867,58197,65226,125259,128861,
#Partially deleted in new
chr10	33211276	33213804	chr10:33211276-33213804	3	+	33211276	33211276	8553170	2	214,567,	0,1961,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	33211409	33335078	chr10:33211409-33335078	1	-	33213205	33334382	789624	10	2308,145,156,167,156,228,182,175,531,89,	0,10309,14724,42618,44906,52236,59265,119298,122900,123580,
#Partially deleted in new
chr10	33249413	33263704	chr10:33249413-33263704	0	-	33249420	33263704	789624	4	136,167,156,59,	0,4614,6902,14232,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	33288303	33288601	chr10:33288303-33288601	3	-	33288303	33288303	8553170	1	298,	0,
#Deleted in new
chr10	33341654	33341905	chr10:33341654-33341905	3	+	33341654	33341654	8553170	1	251,	0,
#Partially deleted in new
chr10	33578930	33600040	chr10:33578930-33600040	3	-	33578930	33578930	8553170	4	439,148,92,183,	0,11691,15189,20927,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	33684754	33687064	chr10:33684754-33687064	3	+	33684754	33684754	8553170	2	427,25,	0,2285,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	33759712	33772658	chr10:33759712-33772658	3	-	33759712	33759712	789624	3	863,1597,476,	0,6037,12470,
#Deleted in new
chr10	33864312	33864723	chr10:33864312-33864723	7	+	33864312	33864312	16724991	1	411,	0,
#Partially deleted in new
chr10	34109559	34815325	chr10:34109559-34815325	1	-	34111168	34814995	0	23	2003,128,121,243,111,232,228,45,62,190,151,171,189,129,140,383,126,84,92,179,181,102,450,	0,10053,21903,160097,174575,207547,221557,226639,227805,232067,238405,249587,250511,265314,268407,272980,274569,289770,292266,360525,407419,586758,705316,
#Partially deleted in new
chr10	34109559	34815325	chr10:34109559-34815325	1	-	34111168	34814995	0	24	2003,128,121,243,111,232,228,45,152,190,151,171,189,129,140,383,126,84,92,132,179,181,102,450,	0,10053,21903,160097,174575,207547,221557,226639,227715,232067,238405,249587,250511,265314,268407,272980,274569,289770,292266,340757,360525,407419,586758,705316,
#Partially deleted in new
chr10	34109560	34815321	chr10:34109560-34815321	1	-	34111168	34814995	0	24	2002,128,121,243,232,228,45,152,190,160,171,189,39,129,140,383,126,84,92,132,179,181,102,446,	0,10052,21902,160096,207546,221556,226638,227714,232066,238395,249586,250510,262937,265313,268406,272979,274568,289769,292265,340756,360524,407418,586757,705315,
#Partially deleted in new
chr10	34109560	34815321	chr10:34109560-34815321	1	-	34111168	34814995	0	24	2002,128,121,243,111,232,228,45,62,190,151,171,189,129,140,383,126,84,92,132,179,181,102,446,	0,10052,21902,160096,174574,207546,221556,226638,227804,232066,238404,249586,250510,265313,268406,272979,274568,289769,292265,340756,360524,407418,586757,705315,
#Partially deleted in new
chr10	34109560	34815321	chr10:34109560-34815321	1	-	34111168	34814995	0	25	2002,128,121,243,111,232,228,45,152,190,151,171,189,39,129,140,383,126,84,92,132,179,181,102,446,	0,10052,21902,160096,174574,207546,221556,226638,227714,232066,238404,249586,250510,262937,265313,268406,272979,274568,289769,292265,340756,360524,407418,586757,705315,
#Partially deleted in new
chr10	34109560	34815321	chr10:34109560-34815321	1	-	34111168	34814995	0	25	2002,128,121,243,111,232,228,45,152,190,160,171,189,39,129,140,383,126,84,92,132,179,181,102,446,	0,10052,21902,160096,174574,207546,221556,226638,227714,232066,238395,249586,250510,262937,265313,268406,272979,274568,289769,292265,340756,360524,407418,586757,705315,
#Partially deleted in new
chr10	34109560	34815321	chr10:34109560-34815321	3	-	34111168	34814995	789624	23	2002,128,121,243,111,232,228,45,152,190,151,171,189,129,140,383,126,84,92,179,181,102,446,	0,10052,21902,160096,174574,207546,221556,226638,227714,232066,238404,249586,250510,265313,268406,272979,274568,289769,292265,360524,407418,586757,705315,
#Partially deleted in new
chr10	34109560	34815321	chr10:34109560-34815321	1	-	34111168	34814995	0	21	2002,128,121,243,232,228,152,190,151,171,189,129,140,383,126,84,92,179,181,102,446,	0,10052,21902,160096,207546,221556,227714,232066,238404,249586,250510,265313,268406,272979,274568,289769,292265,360524,407418,586757,705315,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	34201978	34202074	chr10:34201978-34202074	3	-	34201978	34201978	8553170	1	96,	0,
#Partially deleted in new
chr10	34269786	34336320	chr10:34269786-34336320	0	-	34269786	34269786	8553170	5	113,111,232,228,122,	0,14348,47320,61330,66412,
#Partially deleted in new
chr10	34312255	34815321	chr10:34312255-34815321	1	-	34312351	34814995	0	20	127,232,228,45,62,190,151,171,189,129,140,383,126,84,92,132,179,181,102,446,	0,4851,18861,23943,25109,29371,35709,46891,47815,62618,65711,70284,71873,87074,89570,138061,157829,204723,384062,502620,
#Partially deleted in new
chr10	34312259	34815325	chr10:34312259-34815325	1	-	34312351	34814995	0	21	123,232,228,45,152,190,151,171,189,39,129,140,383,126,84,92,132,179,181,102,450,	0,4847,18857,23939,25015,29367,35705,46887,47811,60238,62614,65707,70280,71869,87070,89566,138057,157825,204719,384058,502616,
#Partially deleted in new
chr10	34312263	34815321	chr10:34312263-34815321	1	-	34312351	34814995	789624	21	119,232,228,45,62,190,151,171,189,39,129,140,383,126,84,92,132,179,181,102,446,	0,4843,18853,23935,25101,29363,35701,46883,47807,60234,62610,65703,70276,71865,87066,89562,138053,157821,204715,384054,502612,
#Partially deleted in new
chr10	34312263	34426731	chr10:34312263-34426731	1	-	34312351	34399409	789624	16	119,232,228,45,149,190,151,171,189,129,140,383,126,84,92,47,	0,4843,18853,23935,25014,29363,35701,46883,47807,62610,65703,70276,71865,87066,89562,114421,
#Partially deleted in new
chr10	34346197	34372533	chr10:34346197-34372533	1	-	34346441	34372518	789624	5	252,151,171,189,36,	0,1767,12949,13873,26300,
#Deleted in new
chr10	34488582	34488878	chr10:34488582-34488878	7	-	34488582	34488582	16724991	1	296,	0,
#Deleted in new
chr10	34663858	34664101	chr10:34663858-34664101	7	-	34663858	34663858	16724991	1	243,	0,
#Deleted in new
chr10	34675634	34676041	chr10:34675634-34676041	7	-	34675634	34675634	16724991	1	407,	0,
#Deleted in new
chr10	34815766	34816386	chr10:34815766-34816386	3	+	34815766	34815766	789624	2	35,267,	0,353,
#Partially deleted in new
chr10	34875209	34875422	chr10:34875209-34875422	7	+	34875209	34875209	16724991	1	213,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	34926774	34926882	chr10:34926774-34926882	3	+	34926774	34926774	8553170	1	108,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	34942968	34943075	chr10:34942968-34943075	3	+	34942968	34942968	8553170	1	107,	0,
#Partially deleted in new
chr10	34965068	34966259	chr10:34965068-34966259	7	+	34965068	34965068	16724991	3	136,238,213,	0,441,978,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr10	35008550	35071339	chr10:35008550-35071339	1	-	35010310	35071317	789624	19	1892,102,203,67,78,153,87,129,60,108,125,163,111,97,83,106,95,103,141,	0,5148,7641,16581,20259,20937,22749,22940,23884,24615,26621,30369,36015,36221,41132,45883,52323,54409,62648,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr10	35008550	35090364	chr10:35008550-35090364	1	-	35010310	35071317	0	22	1892,117,102,203,67,78,153,87,129,60,108,125,163,111,97,83,106,95,103,141,106,186,	0,3297,5148,7641,16581,20259,20937,22749,22940,23884,24615,26621,30369,36015,36221,41132,45883,52323,54409,62648,81345,81628,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr10	35008550	35090366	chr10:35008550-35090366	1	-	35010310	35071317	0	21	1892,117,102,203,67,78,153,87,129,60,108,125,163,111,97,83,106,95,103,141,188,	0,3297,5148,7641,16581,20259,20937,22749,22940,23884,24615,26621,30369,36015,36221,41132,45883,52323,54409,62648,81628,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr10	35008550	35090642	chr10:35008550-35090642	3	-	35010310	35071317	0	21	1892,117,102,203,67,78,153,87,129,60,108,125,163,111,97,83,106,95,103,141,213,	0,3297,5148,7641,16581,20259,20937,22749,22940,23884,24615,26621,30369,36015,36221,41132,45883,52323,54409,62648,81879,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr10	35008550	35090642	chr10:35008550-35090642	0	-	35060873	35071317	789624	21	1892,117,102,203,67,78,153,87,129,60,108,125,163,111,97,83,106,51,103,141,464,	0,3297,5148,7641,16581,20259,20937,22749,22940,23884,24615,26621,30369,36015,36221,41132,45883,52323,54409,62648,81628,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr10	35008551	35074330	chr10:35008551-35074330	1	-	35010310	35074095	789624	21	1891,117,102,203,67,78,153,87,129,60,108,125,163,111,97,83,106,95,103,141,252,	0,3296,5147,7640,16580,20258,20936,22748,22939,23883,24614,26620,30368,36014,36220,41131,45882,52322,54408,62647,65527,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr10	35008551	35090642	chr10:35008551-35090642	1	-	35010310	35071317	789624	20	1891,102,203,67,78,153,87,129,60,108,125,163,111,97,83,106,95,103,141,213,	0,5147,7640,16580,20258,20936,22748,22939,23883,24614,26620,30368,36014,36220,41131,45882,52322,54408,62647,81878,
#Partially deleted in new
chr10	35010291	35074288	chr10:35010291-35074288	1	-	35010310	35074226	0	21	151,117,102,203,67,78,153,87,129,60,108,125,163,111,97,83,106,95,103,141,97,	0,1556,3407,5900,14840,18518,19196,21008,21199,22143,22874,24880,28628,34274,34480,39391,44142,50582,52668,60907,63900,
#Partially deleted in new
chr10	35060873	35090035	chr10:35060873-35090035	0	-	35060873	35060873	8553170	4	95,103,141,140,	0,2086,10325,29022,
#Partially deleted in new
chr10	35063845	35074286	chr10:35063845-35074286	0	-	35063845	35063845	8553170	3	271,141,95,	0,7353,10346,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	35079597	35079680	chr10:35079597-35079680	3	-	35079597	35079597	5263520	1	83,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	35098005	35126657	chr10:35098005-35126657	3	-	35098005	35098005	8553170	5	117,87,217,95,53,	0,1508,2838,22405,28599,
#Partially deleted in new
chr10	35100889	35127020	chr10:35100889-35127020	1	-	35100889	35100889	8553170	4	171,50,95,205,	0,19096,19521,25926,
#Partially deleted in new
chr10	35118182	35126660	chr10:35118182-35126660	1	-	35118182	35118182	8553170	2	558,93,	0,8385,
#Partially deleted in new
chr10	35126790	35212125	chr10:35126790-35212125	1	+	35206908	35211803	789624	3	403,157,470,	0,80104,84865,
#Partially deleted in new
chr10	35126809	35212122	chr10:35126809-35212122	1	+	35148371	35211398	789624	8	384,98,124,147,98,143,157,869,	0,10972,21558,49043,52079,52324,80085,84444,
#Partially deleted in new
chr10	35126840	35152398	chr10:35126840-35152398	0	+	35126840	35126840	8553170	3	353,124,119,	0,21527,25439,
#Partially deleted in new
chr10	35126872	35148663	chr10:35126872-35148663	0	+	35126872	35126872	8553170	3	321,98,296,	0,10909,21495,
#Partially deleted in new
chr10	35126905	35179769	chr10:35126905-35179769	0	+	35126905	35126905	8553170	3	288,98,636,	0,51983,52228,
#Partially deleted in new
chr10	35126922	35179847	chr10:35126922-35179847	1	+	35148371	35179329	789624	4	271,124,98,714,	0,21445,51966,52211,
#Partially deleted in new
chr10	35126947	35211758	chr10:35126947-35211758	0	+	35126947	35126947	8553170	5	246,98,143,157,103,	0,51941,52186,79947,84708,
#Partially deleted in new
chr10	35126958	35211811	chr10:35126958-35211811	0	+	35148371	35206963	789624	4	235,124,157,558,	0,21409,79936,84295,
#Partially deleted in new
chr10	35126988	35206952	chr10:35126988-35206952	0	+	35126988	35126988	8553170	4	205,98,124,58,	0,10793,21379,79906,
#Partially deleted in new
chr10	35127047	35179304	chr10:35127047-35179304	0	+	35127047	35127047	8553170	3	146,98,171,	0,51841,52086,
#Partially deleted in new
chr10	35127062	35211691	chr10:35127062-35211691	0	+	35148371	35178892	789624	7	131,124,115,143,189,157,36,	0,21305,51809,52071,61137,79832,84593,
#Partially deleted in new
chr10	35127101	35154565	chr10:35127101-35154565	1	+	35148371	35154120	789624	3	92,124,505,	0,21266,26959,
#Partially deleted in new
chr10	35127116	35212435	chr10:35127116-35212435	1	+	35206908	35211398	789624	3	77,157,1182,	0,79778,84137,
#Partially deleted in new
chr10	35127155	35179462	chr10:35127155-35179462	0	+	35127155	35127155	8553170	4	38,98,98,329,	0,10626,51733,51978,
#Partially deleted in new
chr10	35127423	35179498	chr10:35127423-35179498	1	+	35148371	35179329	789624	4	144,124,98,365,	0,20944,51465,51710,
#Partially deleted in new
chr10	35127456	35212955	chr10:35127456-35212955	1	+	35148371	35211803	789624	6	111,124,98,143,157,1300,	0,20911,51432,51677,79438,84199,
#Partially deleted in new
chr10	35127456	35188260	chr10:35127456-35188260	0	+	35137835	35188260	789624	6	111,98,124,98,143,61,	0,10325,20911,51432,51677,60743,
#Partially deleted in new
chr10	35127459	35212958	chr10:35127459-35212958	3	+	35137835	35211803	789624	8	108,98,124,98,143,189,157,1303,	0,10322,20908,51429,51674,60740,79435,84196,
#Partially deleted in new
chr10	35127476	35211697	chr10:35127476-35211697	0	+	35148371	35211697	789624	6	91,124,98,143,157,42,	0,20891,51412,51657,79418,84179,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	35135442	35135502	chr10:35135442-35135502	3	+	35135442	35135442	8553170	1	60,	0,
#Partially deleted in new
chr10	35137835	35211398	chr10:35137835-35211398	1	+	35137835	35211398	789624	7	44,124,98,143,189,157,145,	0,10532,41053,41298,50364,69059,73418,
#Partially deleted in new
chr10	35137835	35211398	chr10:35137835-35211398	1	+	35137835	35211398	789624	6	44,124,98,143,157,145,	0,10532,41053,41298,69059,73418,
#Partially deleted in new
chr10	35148371	35212958	chr10:35148371-35212958	1	+	35148371	35211803	789624	5	120,98,143,157,1303,	0,30517,30762,58523,63284,
#Partially deleted in new
chr10	35148400	35211860	chr10:35148400-35211860	0	+	35148400	35206963	789624	3	91,157,205,	0,58494,63255,
#Partially deleted in new
chr10	35158305	35158640	chr10:35158305-35158640	7	+	35158305	35158305	16724991	1	335,	0,
#Partially deleted in new
chr10	35167515	35212950	chr10:35167515-35212950	1	+	35167725	35211803	789624	6	288,98,143,189,157,1295,	0,11373,11618,20684,39379,44140,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	35167538	35179585	chr10:35167538-35179585	0	+	35167538	35167538	8553170	3	265,122,452,	0,3654,11595,
#Partially deleted in new
chr10	35175586	35207006	chr10:35175586-35207006	0	+	35179230	35207006	789624	4	119,143,189,112,	0,3547,12613,31308,
#Partially deleted in new
chr10	35175592	35212496	chr10:35175592-35212496	1	+	35175702	35211803	789624	6	113,98,143,189,157,841,	0,3296,3541,12607,31302,36063,
#Partially deleted in new
chr10	35175592	35212160	chr10:35175592-35212160	1	+	35188276	35211803	789624	4	113,189,157,505,	0,12607,31302,36063,
#Partially deleted in new
chr10	35175595	35188423	chr10:35175595-35188423	0	+	35175595	35175595	8553170	5	110,147,98,143,224,	0,257,3293,3538,12604,
#Partially deleted in new
chr10	35175597	35188388	chr10:35175597-35188388	0	+	35179230	35188388	789624	4	108,115,143,189,	0,3274,3536,12602,
#Partially deleted in new
chr10	35175852	35179843	chr10:35175852-35179843	0	+	35175852	35175852	8553170	3	147,98,710,	0,3036,3281,
#Partially deleted in new
chr10	35195132	35212465	chr10:35195132-35212465	1	+	35195189	35211803	789624	3	82,157,810,	0,11762,16523,
#Partially deleted in new
chr10	35195146	35212923	chr10:35195146-35212923	1	+	35195189	35211398	789624	3	68,157,1670,	0,11748,16107,
#Partially deleted in new
chr10	35195901	35211524	chr10:35195901-35211524	1	+	35196062	35211398	789624	3	198,157,271,	0,10993,15352,
#Partially deleted in new
chr10	35195916	35212495	chr10:35195916-35212495	1	+	35206908	35211398	789624	3	226,157,1242,	0,10978,15337,
#Partially deleted in new
chr10	35196008	35211876	chr10:35196008-35211876	1	+	35196062	35211803	789624	3	91,157,221,	0,10886,15647,
#Partially deleted in new
chr10	35196398	35211865	chr10:35196398-35211865	0	+	35196398	35196398	8553170	3	141,157,612,	0,10496,14855,
#Deleted in new
chr10	35210415	35210750	chr10:35210415-35210750	3	+	35210415	35210415	8553170	1	335,	0,
#Partially deleted in new
chr10	35219893	35230598	chr10:35219893-35230598	3	-	35219893	35219893	8553170	2	207,173,	0,10532,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	35231330	35231394	chr10:35231330-35231394	3	-	35231330	35231330	8553170	1	64,	0,
#Partially deleted in new
chr10	35247024	35571924	chr10:35247024-35571924	1	+	35483411	35569170	789624	12	106,103,105,75,35,101,36,58,120,167,163,2871,	0,1084,3497,236379,254476,269498,278939,282948,283099,305994,318998,322029,
#Partially deleted in new
chr10	35247024	35516575	chr10:35247024-35516575	0	+	35483411	35516575	789624	10	106,103,105,31,79,99,107,75,35,53,	0,1084,3497,42376,80654,85314,208332,236379,254476,269498,
#Partially deleted in new
chr10	35247048	35530036	chr10:35247048-35530036	0	+	35483411	35530036	789624	10	82,103,105,108,107,75,35,101,36,64,	0,1060,3473,187064,208308,236355,254452,269474,278915,282924,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	35250958	35251052	chr10:35250958-35251052	3	-	35250958	35250958	8553170	1	94,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	35314551	35320998	chr10:35314551-35320998	1	-	35314551	35314551	8553170	3	874,90,143,	0,1768,6304,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	35315331	35336401	chr10:35315331-35336401	3	-	35315331	35315331	8553170	4	94,90,123,182,	0,988,20596,20888,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	35336873	35572669	chr10:35336873-35572669	1	+	35483411	35569170	789624	11	334,63,75,35,101,36,58,120,167,163,3616,	0,57942,146530,164627,179649,189090,193099,193250,216145,229149,232180,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	35336873	35572669	chr10:35336873-35572669	1	+	35337053	35569170	789624	9	334,35,101,36,58,120,167,163,3616,	0,164627,179649,189090,193099,193250,216145,229149,232180,
#Partially deleted in new
chr10	35336873	35571924	chr10:35336873-35571924	3	+	35337053	35569170	789624	10	334,75,35,101,36,58,120,167,163,2871,	0,146530,164627,179649,189090,193099,193250,216145,229149,232180,
#Partially deleted in new
chr10	35337051	35553183	chr10:35337051-35553183	0	+	35337051	35337051	8553170	9	156,63,75,35,101,36,58,120,165,	0,57764,146352,164449,179471,188912,192921,193072,215967,
#Partially deleted in new
chr10	35434110	35501661	chr10:35434110-35501661	0	+	35434110	35434110	8553170	3	110,75,161,	0,49293,67390,
#Partially deleted in new
chr10	35525960	35566128	chr10:35525960-35566128	0	+	35525960	35525960	8553170	4	39,120,167,106,	0,4163,27058,40062,
#Partially deleted in new
chr10	35530195	35566285	chr10:35530195-35566285	0	+	35530195	35530195	8553170	3	48,167,263,	0,22823,35827,
#Partially deleted in new
chr10	35604484	35608022	chr10:35604484-35608022	3	-	35604484	35604484	8553170	2	1481,287,	0,3251,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	35605409	35608935	chr10:35605409-35608935	3	+	35605567	35608626	789624	2	222,1358,	0,2168,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	35606000	35608153	chr10:35606000-35608153	1	-	35606000	35606000	8553170	1	2153,	0,
#Deleted in new
chr10	35638248	35642278	chr10:35638248-35642278	3	-	35639344	35641429	0	1	4030,	0,
#Deleted in new
chr10	35641171	35641252	chr10:35641171-35641252	3	-	35641171	35641171	5263520	1	81,	0,
#Deleted in new
chr10	35697299	35698037	chr10:35697299-35698037	7	+	35697299	35697299	16724991	1	738,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	35778301	35800920	chr10:35778301-35800920	3	+	35778301	35778301	789624	3	214,444,2892,	0,18304,19727,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	35896873	35898963	chr10:35896873-35898963	3	-	35896873	35896873	8553170	2	624,244,	0,1846,
#Deleted in new
chr10	36089085	36089389	chr10:36089085-36089389	3	-	36089085	36089085	8553170	2	76,111,	0,193,
#Deleted in new
chr10	36432881	36434484	chr10:36432881-36434484	7	-	36432881	36432881	16724991	1	1603,	0,
#Deleted in new
chr10	36434709	36435174	chr10:36434709-36435174	7	-	36434709	36434709	16724991	1	465,	0,
#Partially deleted in new
chr10	36438615	36442392	chr10:36438615-36442392	3	+	36438615	36438615	8553170	3	54,191,76,	0,3265,3701,
#Partially deleted in new
chr10	36438615	36439797	chr10:36438615-36439797	1	+	36438615	36438615	8553170	2	54,344,	0,838,
#Deleted in new
chr10	36438660	36438788	chr10:36438660-36438788	3	+	36438660	36438660	8553170	1	128,	0,
#Deleted in new
chr10	36521720	36524234	chr10:36521720-36524234	7	-	36521720	36521720	16724991	1	2514,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	36626014	36626138	chr10:36626014-36626138	3	-	36626014	36626014	8553170	1	124,	0,
#Partially deleted in new
chr10	36940108	36943932	chr10:36940108-36943932	3	+	36940108	36940108	8553170	2	82,211,	0,3613,
#Deleted in new
chr10	36944110	36944738	chr10:36944110-36944738	7	-	36944110	36944110	16724991	1	628,	0,
#Deleted in new
chr10	36995022	36995585	chr10:36995022-36995585	7	+	36995022	36995022	16724991	1	563,	0,
#Partially deleted in new
chr10	37125787	37232567	chr10:37125787-37232567	1	+	37125787	37231469	789624	36	221,115,174,107,138,65,573,62,88,29,73,62,91,29,73,29,73,62,91,29,73,29,73,62,91,29,73,29,73,62,91,214,184,918,220,69,	0,4105,4417,6452,8128,10819,15930,19207,21582,23863,23989,26272,27784,32604,32726,36861,36988,39306,40817,55534,55656,59725,59852,62170,63679,67276,67398,71493,71620,73939,75447,90393,91907,93192,105673,106711,
#Partially deleted in new
chr10	37125856	37232567	chr10:37125856-37232567	3	+	37125955	37231469	789624	36	152,115,174,107,138,65,573,62,88,29,73,62,91,29,73,29,73,62,91,29,73,29,73,62,91,29,73,29,73,62,91,214,184,918,220,69,	0,4036,4348,6383,8059,10750,15861,19138,21513,23794,23920,26203,27715,32535,32657,36792,36919,39237,40748,43673,43795,47855,47982,50300,63610,67207,67329,71424,71551,73870,75378,90324,91838,93123,105604,106642,
#Partially deleted in new
chr10	37125856	37232567	chr10:37125856-37232567	1	+	37125955	37231469	789624	42	152,115,174,107,138,65,573,62,88,29,73,62,91,29,73,29,73,62,91,29,73,29,73,62,91,29,73,29,73,62,91,29,73,29,73,62,91,214,184,918,220,69,	0,4036,4348,6383,8059,10750,15861,19138,21513,23794,23920,26203,27715,32535,32657,36792,36919,39237,40748,43673,43795,47855,47982,50300,51809,55465,55587,59656,59783,62101,63610,67207,67329,71424,71551,73870,75378,90324,91838,93123,105604,106642,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	37135236	37135343	chr10:37135236-37135343	3	+	37135236	37135236	8553170	1	107,	0,
#Partially deleted in new
chr10	37184441	37193208	chr10:37184441-37193208	0	+	37184441	37184441	8553170	7	131,29,73,62,91,29,23,	0,1071,1198,3516,5025,8622,8744,
#Deleted in new
chr10	37240886	37242049	chr10:37240886-37242049	3	+	37240886	37240886	8553170	3	130,103,102,	0,284,1061,
#Partially deleted in new
chr10	37248117	37315801	chr10:37248117-37315801	7	+	37248117	37248117	16724991	6	123,62,57,108,84,106,	0,13746,14365,16412,60979,67578,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	37297397	37297689	chr10:37297397-37297689	3	+	37297397	37297397	8553170	1	292,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	37302999	37303109	chr10:37302999-37303109	3	-	37302999	37302999	8553170	1	110,	0,
#Deleted in new
chr10	37337414	37338871	chr10:37337414-37338871	7	+	37337414	37337414	16724991	1	1457,	0,
#Deleted in new
chr10	37348615	37349572	chr10:37348615-37349572	7	+	37348615	37348615	16724991	1	957,	0,
#Partially deleted in new
chr10	37523010	37544701	chr10:37523010-37544701	7	+	37523010	37523010	16724991	5	1009,60,207,53,125,	0,5470,7334,11588,21566,
#Deleted in new
chr10	37600795	37601368	chr10:37600795-37601368	7	-	37600795	37600795	16724991	1	573,	0,
#Deleted in new
chr10	37601439	37602974	chr10:37601439-37602974	3	-	37601969	37602044	789624	1	1535,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	37775370	37784131	chr10:37775370-37784131	3	-	37775370	37775370	8553170	3	162,310,240,	0,895,8521,
#Partially deleted in new
chr10	37776525	37857197	chr10:37776525-37857197	1	-	37776536	37856310	789624	7	50,92,96,127,42,98,13,	0,56499,61091,61459,79770,79909,80659,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	37791579	37791937	chr10:37791579-37791937	3	+	37791579	37791579	8553170	1	358,	0,
#Deleted in new
chr10	37794275	37796109	chr10:37794275-37796109	7	-	37794275	37794275	16724991	1	1834,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	37802822	37857551	chr10:37802822-37857551	0	-	37803937	37856310	789624	7	870,111,92,96,127,42,367,	0,1010,30202,34794,35162,53473,54362,
#Deleted in new
chr10	37818605	37820982	chr10:37818605-37820982	7	-	37818605	37818605	16724991	2	2159,81,	0,2296,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	37828764	37858084	chr10:37828764-37858084	3	-	37831614	37856310	789624	6	4352,96,127,42,98,80,	0,8852,9220,27531,27670,29240,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	37828764	37857610	chr10:37828764-37857610	1	-	37831614	37856310	789624	6	4352,96,127,42,98,426,	0,8852,9220,27531,27670,28420,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	37828764	37857636	chr10:37828764-37857636	1	-	37831282	37856310	789624	5	2548,92,96,127,1341,	0,4260,8852,9220,27531,
#Partially deleted in new
chr10	37829277	37838111	chr10:37829277-37838111	0	-	37829277	37829277	8553170	5	406,81,92,96,127,	0,1954,3747,8339,8707,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	37830855	37857558	chr10:37830855-37857558	1	-	37831282	37856310	789624	7	457,92,96,127,42,98,374,	0,2169,6761,7129,25440,25579,26329,
#Partially deleted in new
chr10	37833054	37858037	chr10:37833054-37858037	0	-	37833054	37856310	789624	6	62,96,127,42,98,273,	0,4562,4930,23241,23380,24710,
#Partially deleted in new
chr10	37837645	37858106	chr10:37837645-37858106	0	-	37837645	37856310	789624	5	67,127,42,98,102,	0,339,18650,18789,20359,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	37857739	37859110	chr10:37857739-37859110	3	+	37857739	37857739	8553170	2	793,33,	0,1338,
#Deleted in new
chr10	37883593	37884109	chr10:37883593-37884109	7	+	37883593	37883593	16724991	2	146,95,	0,421,
#Deleted in new
chr10	37894636	37896666	chr10:37894636-37896666	7	+	37894636	37894636	16724991	1	2030,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	37949571	37976633	chr10:37949571-37976633	3	-	37952126	37971722	789624	6	3624,64,96,127,100,128,	0,4123,7448,7848,22136,26934,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	37950566	37976627	chr10:37950566-37976627	0	-	37950566	37950566	8553170	7	2629,64,96,127,23,100,122,	0,3128,6453,6853,17350,21141,25939,
#Partially deleted in new
chr10	37953062	37976592	chr10:37953062-37976592	0	-	37953062	37953062	8553170	7	133,82,64,96,127,100,87,	0,220,632,3957,4357,18645,23443,
#Partially deleted in new
chr10	37976824	37992467	chr10:37976824-37992467	3	+	37976824	37976824	8553170	3	181,122,141,	0,3464,15502,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	38010649	38060063	chr10:38010649-38060063	1	+	38015982	38056560	789624	6	134,53,79,145,96,5689,	0,1648,5317,6221,6641,43725,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	38010649	38060063	chr10:38010649-38060063	1	+	38054460	38056560	789624	5	134,53,150,96,5689,	0,1648,6221,6641,43725,
#Partially deleted in new
chr10	38010654	38056861	chr10:38010654-38056861	1	+	38010753	38056560	789624	4	129,145,96,2484,	0,6216,6636,43723,
#Partially deleted in new
chr10	38010668	38057959	chr10:38010668-38057959	1	+	38012341	38056560	789624	5	115,53,145,96,3585,	0,1629,6202,6622,43706,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	38010669	38060053	chr10:38010669-38060053	3	+	38012341	38056560	789624	5	114,53,145,96,5676,	0,1628,6201,6621,43708,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	38010685	38065088	chr10:38010685-38065088	1	+	38012341	38064117	789624	6	98,53,145,96,137,1001,	0,1612,6185,6605,43689,53402,
#Partially deleted in new
chr10	38010692	38017707	chr10:38010692-38017707	0	+	38010692	38010692	8553170	4	91,53,145,417,	0,1605,6178,6598,
#Partially deleted in new
chr10	38010698	38054538	chr10:38010698-38054538	0	+	38010698	38010698	8553170	5	85,53,141,96,164,	0,1599,6176,6592,43676,
#Deleted in new
chr10	38043872	38043975	chr10:38043872-38043975	3	-	38043872	38043872	8553170	1	103,	0,
#Deleted in new
chr10	38068448	38068694	chr10:38068448-38068694	7	-	38068448	38068448	16724991	1	246,	0,
#Deleted in new
chr10	38080055	38080877	chr10:38080055-38080877	7	-	38080055	38080055	16724991	1	822,	0,
#Deleted in new
chr10	38091763	38092051	chr10:38091763-38092051	7	-	38091763	38091763	16724991	1	288,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	38094333	38150293	chr10:38094333-38150293	1	+	38096617	38146820	789624	8	157,294,92,61,59,127,96,3562,	0,597,1204,1410,2240,20421,20861,52398,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	38094335	38123348	chr10:38094335-38123348	1	+	38096617	38118837	789624	8	155,294,276,61,59,127,96,5959,	0,595,1022,1408,2238,20419,20859,23054,
#Deleted in new
chr10	38094335	38095559	chr10:38094335-38095559	0	+	38094335	38094335	8553170	3	155,294,22,	0,595,1202,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	38094346	38125544	chr10:38094346-38125544	3	+	38096617	38118837	789624	7	144,96,61,59,127,96,8155,	0,1191,1397,2227,20408,20848,23043,
#Partially deleted in new
chr10	38094350	38115385	chr10:38094350-38115385	0	+	38094350	38094350	8553170	7	140,294,276,61,59,127,191,	0,580,1007,1393,2223,20404,20844,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr10	38094367	38360098	chr10:38094367-38360098	3	+	38096617	38159760	789624	18	123,294,92,61,59,127,96,193,183,75,36,120,163,144,121,169,112,1787,	0,563,1170,1376,2206,20387,20827,65268,67205,83533,101240,104924,116283,153554,172912,215680,238676,263944,
#Partially deleted in new
chr10	38096573	38115693	chr10:38096573-38115693	0	+	38096573	38096573	8553170	3	59,127,499,	0,18181,18621,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	38137336	38144399	chr10:38137336-38144399	3	+	38137336	38137336	8553170	1	7063,	0,
#Deleted in new
chr10	38161569	38161749	chr10:38161569-38161749	7	+	38161569	38161569	16724991	1	180,	0,
#Partially deleted in new
chr10	38164647	38178030	chr10:38164647-38178030	5	+	38164647	38164647	16724991	3	225,73,130,	0,1338,13253,
#Partially deleted in new
chr10	38175667	38212357	chr10:38175667-38212357	4	+	38175667	38175667	16724991	7	293,75,36,52,120,163,51,	0,2233,19940,21832,23624,34983,36639,
#Partially deleted in new
chr10	38175989	38212417	chr10:38175989-38212417	7	+	38175989	38175989	16724991	9	195,75,35,101,36,52,120,163,111,	0,1911,3902,10680,19618,21510,23302,34661,36317,
#Partially deleted in new
chr10	38247921	38333155	chr10:38247921-38333155	7	+	38247921	38247921	16724991	3	144,169,112,	0,62126,85122,
#Deleted in new
chr10	38250441	38250603	chr10:38250441-38250603	7	-	38250441	38250441	16724991	1	162,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	38356379	38378505	chr10:38356379-38378505	7	+	38356379	38356379	16724991	8	110,204,99,115,196,57,99,521,	0,1932,5860,7116,9054,13573,14695,21605,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	38356454	38378107	chr10:38356454-38378107	5	+	38356454	38356454	16724991	9	35,204,99,115,196,105,57,99,123,	0,1857,5785,7041,8979,12669,13498,14620,21530,
#Partially deleted in new
chr10	38383068	38402593	chr10:38383068-38402593	7	-	38383068	38383068	16724991	4	187,66,135,25,	0,7772,8914,19500,
#Partially deleted in new
chr10	38385145	38402916	chr10:38385145-38402916	5	-	38385145	38385145	16724991	3	260,135,348,	0,6837,17423,
#Partially deleted in new
chr10	38391982	38399730	chr10:38391982-38399730	5	-	38391982	38391982	16724991	3	135,101,107,	0,1029,7641,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr10	38403188	38452153	chr10:38403188-38452153	7	+	38403188	38403188	16724991	18	362,110,132,216,154,66,59,523,231,65,124,98,197,169,119,191,58,4339,	0,4442,5614,9039,9540,10138,12355,13493,19579,22630,31941,33920,34355,35669,41356,42228,44475,44626,
#Partially deleted in new
chr10	38407630	38417204	chr10:38407630-38417204	5	+	38407630	38407630	16724991	4	110,66,95,78,	0,5696,9051,9496,
#Deleted in new
chr10	38423624	38423728	chr10:38423624-38423728	3	+	38423624	38423624	8553170	1	104,	0,
#Deleted in new
chr10	38452986	38455365	chr10:38452986-38455365	7	-	38452986	38452986	16724991	3	117,439,1357,	0,535,1022,
#Partially deleted in new
chr10	38453180	38466176	chr10:38453180-38466176	3	+	38453180	38453180	8553170	3	350,169,208,	0,4500,12788,
#Deleted in new
chr10	38601417	38605609	chr10:38601417-38605609	7	+	38601417	38601417	16724991	4	149,85,130,1237,	0,2446,2680,2955,
#Deleted in new
chr10	38617254	38617344	chr10:38617254-38617344	7	+	38617254	38617254	16724991	1	90,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	38635907	38638082	chr10:38635907-38638082	7	+	38635907	38635907	16724991	1	2175,	0,
#Partially deleted in new
chr10	38640970	38689068	chr10:38640970-38689068	7	-	38640970	38640970	16724991	9	216,136,109,150,106,175,128,143,171,	0,4322,5342,9264,10257,30934,43850,45292,47927,
#Deleted in new
chr10	38696423	38697902	chr10:38696423-38697902	7	+	38696423	38696423	16724991	1	1479,	0,
#Partially deleted in new
chr10	38713194	38719229	chr10:38713194-38719229	7	+	38713194	38713194	16724991	3	87,81,78,	0,4854,5957,
#Partially deleted in new
chr10	38762094	38762491	chr10:38762094-38762491	7	-	38762094	38762094	16724991	1	397,	0,
#Deleted in new
chr10	38783003	38783108	chr10:38783003-38783108	7	+	38783003	38783003	16724991	1	105,	0,
#Deleted in new
chr10	42149309	42149549	chr10:42149309-42149549	7	-	42149309	42149309	16724991	1	240,	0,
#Deleted in new
chr10	42185338	42185791	chr10:42185338-42185791	7	+	42185338	42185338	16724991	2	31,298,	0,155,
#Deleted in new
chr10	42209989	42210383	chr10:42209989-42210383	7	+	42209989	42209989	16724991	1	394,	0,
#Partially deleted in new
chr10	42242720	42276842	chr10:42242720-42276842	7	+	42242720	42242720	16724991	3	51,176,230,	0,8264,33892,
#Partially deleted in new
chr10	42250984	42271902	chr10:42250984-42271902	5	+	42250984	42250984	16724991	2	176,106,	0,20812,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	42279733	42281819	chr10:42279733-42281819	7	-	42279733	42279733	16724991	1	2086,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	42331865	42367974	chr10:42331865-42367974	7	-	42331865	42331865	16724991	3	6375,56,159,	0,8635,35950,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	42333728	42367971	chr10:42333728-42367971	4	-	42333728	42333728	16724991	6	4512,98,41,58,86,156,	0,5657,6787,19210,27220,34087,
#Partially deleted in new
chr10	42336100	42353011	chr10:42336100-42353011	5	-	42336100	42336100	16724991	2	2140,73,	0,16838,
#Partially deleted in new
chr10	42337782	42367933	chr10:42337782-42367933	4	-	42337782	42337782	16724991	2	458,118,	0,30033,
#Partially deleted in new
chr10	42352799	42367956	chr10:42352799-42367956	4	-	42352799	42352799	16724991	3	193,222,141,	0,14706,15016,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	42408167	42472240	chr10:42408167-42472240	7	-	42408167	42408167	16724991	9	2026,163,167,120,36,101,75,187,436,	0,3531,12595,17150,20948,25086,43441,61914,63637,
#Partially deleted in new
chr10	42409726	42454385	chr10:42409726-42454385	5	-	42409726	42409726	16724991	10	467,163,167,120,52,36,101,36,75,223,	0,1972,11036,15591,17473,19389,23527,36442,41882,44436,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	42425362	42475349	chr10:42425362-42475349	5	-	42425362	42425362	16724991	8	75,36,68,101,75,187,72,116,	0,3753,4795,7891,26246,44719,46831,49871,
#Deleted in new
chr10	42470081	42470268	chr10:42470081-42470268	7	-	42470081	42470081	16724991	1	187,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	42475542	42495336	chr10:42475542-42495336	3	+	42475542	42475542	789624	5	338,182,148,263,1322,	0,1718,11436,16537,18472,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	42475627	42495336	chr10:42475627-42495336	0	+	42475627	42475627	8553170	5	337,182,148,263,1322,	0,1633,11351,16452,18387,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	42513509	42552794	chr10:42513509-42552794	7	-	42513509	42513509	16724991	8	7618,124,127,59,242,291,155,21,	0,9672,10102,37047,38063,38480,38878,39264,
#Deleted in new
chr10	42519694	42521046	chr10:42519694-42521046	5	-	42519694	42519694	16724991	1	1352,	0,
#Partially deleted in new
chr10	42520786	42552822	chr10:42520786-42552822	5	-	42520786	42520786	16724991	6	341,124,127,59,1020,24,	0,2395,2825,29770,30790,32012,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	42520822	42552808	chr10:42520822-42552808	4	-	42520822	42520822	16724991	5	305,124,127,121,2252,	0,2359,2789,4717,29734,
#Deleted in new
chr10	42555439	42555724	chr10:42555439-42555724	7	+	42555439	42555439	16724991	1	285,	0,
#Deleted in new
chr10	42566676	42567483	chr10:42566676-42567483	7	+	42566676	42566676	16724991	1	807,	0,
#Partially deleted in new
chr10	42574184	42594667	chr10:42574184-42594667	0	-	42574640	42594667	789624	2	494,73,	0,20410,
#Deleted in new
chr10	42578499	42578727	chr10:42578499-42578727	7	+	42578499	42578499	16724991	1	228,	0,
#Deleted in new
chr10	42579723	42579858	chr10:42579723-42579858	7	+	42579723	42579723	16724991	1	135,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	42581593	42638553	chr10:42581593-42638553	0	-	42581593	42581593	789624	6	1530,105,77,96,53,80,	0,13001,32688,50335,55326,56880,
#Partially deleted in new
chr10	42582690	42632367	chr10:42582690-42632367	0	-	42583115	42632367	789624	4	433,105,96,73,	0,11904,49238,49604,
#Deleted in new
chr10	42583240	42583375	chr10:42583240-42583375	7	+	42583240	42583240	16724991	1	135,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	42589106	42638544	chr10:42589106-42638544	3	-	42592612	42636928	789624	5	5593,96,145,53,71,	0,42822,43188,47813,49367,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	42589106	42632912	chr10:42589106-42632912	1	-	42592612	42632912	789624	4	5593,96,145,9,	0,42822,43188,43797,
#Partially deleted in new
chr10	42605157	42605263	chr10:42605157-42605263	3	+	42605157	42605157	8553170	1	106,	0,
#Partially deleted in new
chr10	42631807	42638521	chr10:42631807-42638521	0	-	42631807	42631807	8553170	4	217,145,53,48,	0,487,5112,6666,
#Partially deleted in new
chr10	42631928	42638551	chr10:42631928-42638551	0	-	42631928	42638503	789624	3	96,145,78,	0,366,6545,
#Partially deleted in new
chr10	42636825	42638568	chr10:42636825-42638568	0	-	42636825	42636825	8553170	2	147,95,	0,1648,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	42638313	42645542	chr10:42638313-42645542	3	+	42638313	42638313	8553170	2	240,550,	0,6679,
#Deleted in new
chr10	42660727	42661776	chr10:42660727-42661776	7	+	42660727	42660727	16724991	1	1049,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	42674196	42691723	chr10:42674196-42691723	3	-	42674196	42674196	789624	4	161,103,66,189,	0,9161,11754,17338,
#Partially deleted in new
chr10	42694370	42714575	chr10:42694370-42714575	7	-	42694370	42694370	16724991	10	211,172,182,141,210,179,175,184,190,146,	0,1264,7624,8845,9635,12091,13447,16420,16764,20059,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	42696034	42706453	chr10:42696034-42706453	3	+	42696034	42696034	8553170	3	177,756,3032,	0,5467,7387,
#Partially deleted in new
chr10	42725856	42737159	chr10:42725856-42737159	7	+	42725856	42725856	16724991	4	121,119,83,118,	0,8851,10832,11185,
#Partially deleted in new
chr10	42747543	42748687	chr10:42747543-42748687	7	-	42747543	42747543	16724991	2	420,174,	0,970,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	42751177	42754297	chr10:42751177-42754297	3	-	42751177	42751177	789624	1	3120,	0,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr10	42782800	42834937	chr10:42782800-42834937	3	+	42784394	42831096	789624	23	30,209,191,80,189,143,122,188,140,758,102,158,82,74,177,189,181,59,123,148,176,162,4072,	0,1561,2681,4367,7522,8826,9692,10156,11051,13673,14621,15667,19336,33798,34517,37435,37707,38133,39261,40317,40808,47460,48065,
#Deleted in new
chr10	42832446	42832550	chr10:42832446-42832550	3	-	42832446	42832446	8553170	1	104,	0,
#Deleted in new
chr10	42871520	42874060	chr10:42871520-42874060	3	+	42871520	42871520	789624	2	162,1552,	0,988,
#Deleted in new
chr10	42979016	42981507	chr10:42979016-42981507	3	-	42979016	42979016	789624	3	83,277,140,	0,1266,2351,
#Deleted in new
chr10	42997562	42997681	chr10:42997562-42997681	3	+	42997562	42997562	5263520	1	119,	0,
#Partially deleted in new
chr10	43077026	43130351	chr10:43077026-43130351	3	+	43077258	43128269	0	20	305,264,288,242,196,200,259,126,111,120,257,148,108,215,123,71,138,100,148,2240,	0,23432,25315,27925,29349,32004,34180,35072,35826,36529,37453,39557,41346,42504,43054,44919,46644,47856,49548,51085,
#Partially deleted in new
chr10	43077068	43130345	chr10:43077068-43130345	1	+	43077258	43120124	789624	14	263,264,288,242,196,200,26,44,123,71,138,100,148,2234,	0,23390,25273,27883,29307,31962,34138,42633,43012,44877,46602,47814,49506,51043,
#Partially deleted in new
chr10	43077073	43114593	chr10:43077073-43114593	0	+	43077258	43114593	789624	5	258,126,111,120,114,	0,35025,35779,36482,37406,
#Partially deleted in new
chr10	43077078	43127504	chr10:43077078-43127504	1	+	43077258	43126754	0	19	253,264,288,242,196,200,259,126,111,120,257,148,108,215,123,71,138,100,930,	0,23380,25263,27873,29297,31952,34128,35020,35774,36477,37401,39505,41294,42452,43002,44867,46592,47804,49496,
#Partially deleted in new
chr10	43100483	43102835	chr10:43100483-43102835	0	+	43100483	43102405	789624	2	239,534,	0,1818,
#Partially deleted in new
chr10	43100483	43102839	chr10:43100483-43102839	0	+	43100483	43102805	789624	2	239,369,	0,1987,
#Deleted in new
chr10	43104731	43106490	chr10:43104731-43106490	0	+	43104731	43104731	8553170	2	462,115,	0,1644,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	43136823	43138334	chr10:43136823-43138334	3	-	43136823	43136823	8553170	1	1511,	0,
#Partially deleted in new
chr10	43138485	43185308	chr10:43138485-43185308	3	+	43155149	43183542	789624	8	82,914,217,102,179,95,82,2059,	0,16411,20229,22008,25380,28518,37465,44764,
#Partially deleted in new
chr10	43194534	43229739	chr10:43194534-43229739	1	-	43196243	43229654	789624	13	1734,73,124,192,80,103,93,75,222,138,123,204,103,	0,1941,2441,3469,4398,4557,5141,5647,6132,7273,8763,11384,35102,
#Partially deleted in new
chr10	43194535	43266919	chr10:43194535-43266919	3	-	43196243	43206116	789624	13	1733,73,124,192,80,103,93,75,222,138,123,204,75,	0,1940,2440,3468,4397,4556,5140,5646,6131,7272,8762,11383,72309,
#Deleted in new
chr10	43196092	43209184	chr10:43196092-43209184	1	-	43196243	43206116	789624	13	176,73,124,192,80,103,93,75,222,138,123,204,2501,	0,383,883,1911,2840,2999,3583,4089,4574,5715,7205,9826,10591,
#Deleted in new
chr10	43199115	43202682	chr10:43199115-43202682	0	-	43199115	43202682	789624	6	79,93,75,222,138,25,	0,560,1066,1551,2692,3542,
#Deleted in new
chr10	43200194	43203819	chr10:43200194-43203819	0	-	43200194	43200194	8553170	5	62,222,138,123,208,	0,472,1613,3103,3417,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	43323664	43327932	chr10:43323664-43327932	3	+	43323664	43323664	8553170	3	36,92,263,	0,3706,4005,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	43325832	43350792	chr10:43325832-43350792	3	-	43325832	43325832	8553170	3	1036,95,459,	0,2243,24501,
#Deleted in new
chr10	43341785	43341910	chr10:43341785-43341910	3	+	43341785	43341785	8553170	1	125,	0,
#Partially deleted in new
chr10	43371641	43376332	chr10:43371641-43376332	1	+	43373746	43376166	789624	9	56,46,269,33,27,75,40,38,186,	0,1085,1873,2828,2971,3857,4053,4390,4505,
#Partially deleted in new
chr10	43371643	43376335	chr10:43371643-43376335	3	+	43373746	43376166	789624	8	54,322,33,27,75,40,38,189,	0,1818,2826,2969,3855,4051,4388,4503,
#Partially deleted in new
chr10	43371652	43376332	chr10:43371652-43376332	0	+	43371652	43371652	8553170	8	45,46,33,27,75,40,38,186,	0,1074,2817,2960,3846,4042,4379,4494,
#Partially deleted in new
chr10	43374468	43376335	chr10:43374468-43376335	0	+	43374468	43374468	8553170	5	34,27,40,38,189,	0,144,1226,1563,1678,
#Partially deleted in new
chr10	43385616	43408882	chr10:43385616-43408882	3	-	43386636	43387884	0	4	2320,59,135,156,	0,9013,10839,23110,
#Partially deleted in new
chr10	43385616	43407819	chr10:43385616-43407819	1	-	43386636	43387884	0	4	2320,59,135,103,	0,9013,10839,22100,
#Partially deleted in new
chr10	43385616	43396831	chr10:43385616-43396831	1	-	43386636	43387884	0	3	2320,59,376,	0,9013,10839,
#Partially deleted in new
chr10	43385616	43397346	chr10:43385616-43397346	1	-	43386636	43387884	0	4	2320,59,135,162,	0,9013,10839,11568,
#Partially deleted in new
chr10	43386021	43409166	chr10:43386021-43409166	1	-	43386636	43387884	0	4	1915,59,135,77,	0,8608,10434,23068,
#Partially deleted in new
chr10	43387588	43397278	chr10:43387588-43397278	0	-	43387588	43387884	789624	4	348,59,135,94,	0,7041,8867,9596,
#Partially deleted in new
chr10	43387642	43396817	chr10:43387642-43396817	0	-	43387642	43387642	8553170	3	294,59,362,	0,6987,8813,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	43417248	43417438	chr10:43417248-43417438	3	-	43417248	43417248	5263520	1	190,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	43420737	43422100	chr10:43420737-43422100	3	+	43420737	43420737	8553170	2	329,431,	0,932,
#Partially deleted in new
chr10	43436840	43481678	chr10:43436840-43481678	2	+	43436840	43481678	789624	4	95,127,96,250,	0,38880,39266,44588,
#Partially deleted in new
chr10	43437125	43483179	chr10:43437125-43483179	1	+	43475810	43481922	789624	4	137,127,96,1751,	0,38595,38981,44303,
#Partially deleted in new
chr10	43437125	43481731	chr10:43437125-43481731	0	+	43475810	43481731	789624	3	137,127,303,	0,38595,44303,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	43437147	43454532	chr10:43437147-43454532	0	+	43437147	43437147	8553170	2	115,468,	0,16917,
#Partially deleted in new
chr10	43437157	43475830	chr10:43437157-43475830	0	+	43475810	43475830	8553170	2	105,135,	0,38538,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	43451919	43454664	chr10:43451919-43454664	0	+	43451919	43451919	8553170	1	2745,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	43458064	43458129	chr10:43458064-43458129	3	+	43458064	43458064	8553170	1	65,	0,
#Deleted in new
chr10	43523255	43525217	chr10:43523255-43525217	7	+	43523255	43523255	16724991	1	1962,	0,
#Partially deleted in new
chr10	43556343	43568459	chr10:43556343-43568459	1	-	43556702	43558079	789624	2	1828,561,	0,11555,
#Partially deleted in new
chr10	43556343	43574584	chr10:43556343-43574584	1	-	43556702	43558079	789624	4	1828,123,41,45,	0,11555,17293,18196,
#Partially deleted in new
chr10	43556346	43574618	chr10:43556346-43574618	1	-	43556702	43558079	789624	3	1825,123,79,	0,11552,18193,
#Partially deleted in new
chr10	43556346	43574618	chr10:43556346-43574618	3	-	43556702	43558079	789624	2	1825,79,	0,18193,
#Partially deleted in new
chr10	43557528	43574597	chr10:43557528-43574597	0	-	43557528	43557528	8553170	2	643,58,	0,17011,
#Deleted in new
chr10	43604842	43606251	chr10:43604842-43606251	7	-	43604842	43604842	16724991	1	1409,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	43606406	43617903	chr10:43606406-43617903	3	+	43607050	43617369	789624	5	140,78,127,96,1613,	0,590,2207,2848,9884,
#Partially deleted in new
chr10	43606418	43616395	chr10:43606418-43616395	0	+	43607050	43616395	789624	5	123,78,127,96,105,	0,578,2195,2836,9872,
#Deleted in new
chr10	43606418	43607400	chr10:43606418-43607400	0	+	43606418	43606418	8553170	2	128,404,	0,578,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	43606425	43617903	chr10:43606425-43617903	1	+	43607050	43617369	789624	5	138,78,127,96,1613,	0,571,2188,2829,9865,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	43628816	43674703	chr10:43628816-43674703	3	+	43628816	43628816	789624	5	162,401,361,138,870,	0,42304,42901,43491,45017,
#Deleted in new
chr10	43630881	43631564	chr10:43630881-43631564	3	-	43630881	43630881	8553170	2	164,247,	0,436,
#Deleted in new
chr10	43630946	43631382	chr10:43630946-43631382	7	+	43630946	43630946	16724991	1	436,	0,
#Partially deleted in new
chr10	43643858	43648856	chr10:43643858-43648856	3	-	43644049	43646133	0	3	943,139,55,	0,2205,4943,
#Partially deleted in new
chr10	43643859	43648704	chr10:43643859-43648704	1	-	43644049	43646133	0	3	942,139,120,	0,2204,4725,
#Deleted in new
chr10	43643871	43645047	chr10:43643871-43645047	3	+	43643871	43643871	789624	2	236,198,	0,978,
#Deleted in new
chr10	43644648	43646275	chr10:43644648-43646275	0	-	43644648	43644648	8553170	2	153,318,	0,1309,
#Partially deleted in new
chr10	43665667	43667005	chr10:43665667-43667005	3	+	43665667	43665667	8553170	2	126,336,	0,1002,
#Partially deleted in new
chr10	43728216	43728728	chr10:43728216-43728728	7	+	43728216	43728216	16724991	1	512,	0,
#Partially deleted in new
chr10	43732333	43732584	chr10:43732333-43732584	7	+	43732333	43732333	16724991	1	251,	0,
#Partially deleted in new
chr10	43741436	43742350	chr10:43741436-43742350	7	-	43741436	43741436	16724991	2	74,225,	0,689,
#Deleted in new
chr10	43777561	43778825	chr10:43777561-43778825	3	-	43777561	43777561	789624	2	289,119,	0,1145,
#Deleted in new
chr10	43777561	43778626	chr10:43777561-43778626	0	-	43777561	43777561	8553170	2	289,45,	0,1020,
#Deleted in new
chr10	43789248	43790387	chr10:43789248-43790387	7	-	43789248	43789248	16724991	1	1139,	0,
#Partially deleted in new
chr10	43845260	43875202	chr10:43845260-43875202	3	+	43845260	43845260	8553170	7	342,325,834,49,183,223,247,	0,4413,14266,16618,21896,28929,29695,
#Partially deleted in new
chr10	43845305	43850622	chr10:43845305-43850622	1	+	43845305	43845305	789624	3	102,70,949,	0,227,4368,
#Partially deleted in new
chr10	43846372	43850501	chr10:43846372-43850501	0	+	43846372	43846372	8553170	2	313,828,	0,3301,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	43859410	43895433	chr10:43859410-43895433	0	+	43859410	43859410	789624	5	950,49,183,223,569,	0,2468,7746,14779,35454,
#Partially deleted in new
chr10	43900890	43912331	chr10:43900890-43912331	3	-	43900890	43900890	8553170	3	933,794,39,	0,2537,11402,
#Partially deleted in new
chr10	43901364	43912326	chr10:43901364-43912326	0	-	43901364	43901364	8553170	2	459,34,	0,10928,
#Partially deleted in new
chr10	43912443	43914236	chr10:43912443-43914236	3	+	43912443	43912443	8553170	2	35,478,	0,1315,
#Deleted in new
chr10	43939002	43944466	chr10:43939002-43944466	3	+	43939002	43939002	8553170	5	1540,256,90,135,105,	0,1719,4189,4854,5359,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	44259601	44261813	chr10:44259601-44261813	3	-	44259601	44259601	8553170	2	544,297,	0,1915,
#Partially deleted in new
chr10	44282925	44292734	chr10:44282925-44292734	3	-	44282925	44282925	8553170	2	363,140,	0,9669,
#Partially deleted in new
chr10	44292083	44293709	chr10:44292083-44293709	1	-	44292083	44292083	8553170	2	651,438,	0,1188,
#Partially deleted in new
chr10	44292568	44293948	chr10:44292568-44293948	0	+	44292568	44292568	8553170	2	365,645,	0,735,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	44292749	44294649	chr10:44292749-44294649	3	+	44292760	44293943	789624	3	184,189,737,	0,551,1163,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	44292749	44294649	chr10:44292749-44294649	0	+	44292749	44292749	8553170	3	184,189,737,	0,551,1163,
#Deleted in new
chr10	44370164	44385092	chr10:44370164-44385092	1	-	44373327	44385005	0	4	3179,87,118,148,	0,8472,10598,14780,
#Deleted in new
chr10	44372621	44385092	chr10:44372621-44385092	1	-	44372887	44385005	0	3	469,48,148,	0,8211,12323,
#Deleted in new
chr10	44372887	44385097	chr10:44372887-44385097	1	-	44372887	44385005	0	3	202,49,153,	0,7944,12057,
#Deleted in new
chr10	44375866	44385043	chr10:44375866-44385043	1	-	44375938	44385005	0	4	166,87,118,99,	0,2770,4896,9078,
#Deleted in new
chr10	44377132	44385092	chr10:44377132-44385092	3	-	44378632	44385005	0	3	1591,118,148,	0,3630,7812,
#Deleted in new
chr10	44377163	44385049	chr10:44377163-44385049	1	-	44377748	44385005	0	4	742,87,118,105,	0,1473,3599,7781,
#Deleted in new
chr10	44378556	44386493	chr10:44378556-44386493	0	-	44378556	44378556	8553170	3	167,118,518,	0,2206,7419,
#Deleted in new
chr10	44380410	44385070	chr10:44380410-44385070	0	-	44380410	44380410	8553170	2	470,126,	0,4534,
#Partially deleted in new
chr10	44414648	44415153	chr10:44414648-44415153	7	-	44414648	44414648	16724991	1	505,	0,
#Partially deleted in new
chr10	44488334	44488445	chr10:44488334-44488445	7	-	44488334	44488334	16724991	1	111,	0,
#Partially deleted in new
chr10	44591207	44602104	chr10:44591207-44602104	3	-	44591207	44591207	8553170	2	577,155,	0,10742,
#Deleted in new
chr10	44806442	44808223	chr10:44806442-44808223	7	+	44806442	44806442	16724991	1	1781,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	44899613	44920220	chr10:44899613-44920220	3	-	44899613	44899613	8553170	3	912,234,298,	0,7271,20309,
#Partially deleted in new
chr10	44911199	44937002	chr10:44911199-44937002	2	+	44911512	44935134	789624	5	383,67,72,140,2347,	0,16721,20798,22437,23456,
#Partially deleted in new
chr10	44911315	44935194	chr10:44911315-44935194	1	+	44934660	44935134	789624	4	267,72,140,539,	0,20682,22321,23340,
#Deleted in new
chr10	44931849	44935035	chr10:44931849-44935035	0	+	44931849	44931849	8553170	3	220,140,380,	0,1787,2806,
#Partially deleted in new
chr10	44937507	44955725	chr10:44937507-44955725	3	+	44937507	44937507	8553170	2	168,257,	0,17961,
#Deleted in new
chr10	44958916	44959458	chr10:44958916-44959458	3	-	44958916	44958916	8553170	1	542,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	44959406	44994707	chr10:44959406-44994707	0	+	44959406	44959406	8553170	10	460,1684,143,92,158,102,52,122,98,1439,	0,10758,23114,24615,25406,29867,30263,31541,32498,33862,
#Partially deleted in new
chr10	44959791	44995891	chr10:44959791-44995891	3	+	44970202	44993329	789624	11	75,100,76,143,92,158,102,52,122,98,2623,	0,10373,11981,22729,24230,25021,29482,29878,31156,32113,33477,
#Partially deleted in new
chr10	44959830	44984113	chr10:44959830-44984113	0	+	44970202	44984113	789624	5	36,100,76,143,173,	0,10334,11942,22690,24110,
#Partially deleted in new
chr10	44959838	44989374	chr10:44959838-44989374	0	+	44970202	44980903	789624	8	28,100,76,36,143,92,158,101,	0,10326,11934,21053,22682,24183,24974,29435,
#Partially deleted in new
chr10	44970168	44983912	chr10:44970168-44983912	0	+	44970168	44970168	8553170	4	96,76,139,43,	0,1604,12356,13701,
#Partially deleted in new
chr10	44970223	44983084	chr10:44970223-44983084	0	+	44970223	44983021	789624	4	41,76,143,175,	0,1549,12297,12686,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	44970980	44978790	chr10:44970980-44978790	0	-	44970980	44970980	8553170	2	695,173,	0,7637,
#Partially deleted in new
chr10	44971793	44993430	chr10:44971793-44993430	0	+	44971793	44971793	8553170	8	55,143,158,102,52,122,98,162,	0,10727,13019,17480,17876,19154,20111,21475,
#Deleted in new
chr10	44976128	44978810	chr10:44976128-44978810	3	-	44977391	44978030	789624	2	1927,193,	0,2489,
#Deleted in new
chr10	44977778	44978789	chr10:44977778-44978789	0	-	44977778	44978030	789624	2	441,172,	0,839,
#Partially deleted in new
chr10	44981038	44991960	chr10:44981038-44991960	0	+	44981038	44981038	8553170	7	1625,92,158,102,52,122,56,	0,2983,3774,8235,8631,9909,10866,
#Partially deleted in new
chr10	44983027	44991960	chr10:44983027-44991960	0	+	44983027	44983027	8553170	5	1943,102,52,122,56,	0,6246,6642,7920,8877,
#Partially deleted in new
chr10	44984875	44991055	chr10:44984875-44991055	0	+	44984875	44984875	8553170	4	95,102,105,108,	0,4398,4741,6072,
#Partially deleted in new
chr10	44989332	44991343	chr10:44989332-44991343	0	+	44989332	44991105	789624	3	43,52,396,	0,337,1615,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	44990537	44991970	chr10:44990537-44991970	0	+	44990537	44990537	8553170	3	291,122,66,	0,410,1367,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	44997697	45000888	chr10:44997697-45000888	3	-	44997697	44997697	8553170	2	2719,359,	0,2832,
#Partially deleted in new
chr10	45000474	45005326	chr10:45000474-45005326	3	+	45003368	45004043	789624	2	504,2047,	0,2805,
#Partially deleted in new
chr10	45002221	45071588	chr10:45002221-45071588	7	-	45002221	45002221	16724991	7	1854,207,87,47,190,63,24,	0,13740,63305,63953,64111,69025,69343,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	45016079	45071371	chr10:45016079-45071371	4	-	45016079	45016079	16724991	5	89,87,47,505,125,	0,49447,50095,54398,55167,
#Partially deleted in new
chr10	45016079	45135640	chr10:45016079-45135640	0	-	45016079	45016079	8553170	4	89,115,83,366,	0,90536,90921,119195,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	45016100	45147221	chr10:45016100-45147221	3	-	45016100	45016100	8553170	8	68,115,83,100,128,60,118,160,	0,90515,90900,99837,104943,125994,130727,130961,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	45016104	45146916	chr10:45016104-45146916	0	-	45016104	45016104	8553170	3	64,60,89,	0,125990,130723,
#Deleted in new
chr10	45055655	45056268	chr10:45055655-45056268	7	+	45055655	45055655	16724991	1	613,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	45061426	45071620	chr10:45061426-45071620	4	-	45061426	45061426	16724991	5	214,323,87,47,73,	0,835,4100,4748,10121,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	45066171	45071620	chr10:45066171-45071620	4	-	45066171	45066171	16724991	4	50,190,505,56,	0,161,4306,5393,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	45066344	45076066	chr10:45066344-45076066	5	-	45066344	45066344	16724991	3	178,171,155,	0,8480,9567,
#Deleted in new
chr10	45070791	45071209	chr10:45070791-45071209	5	-	45070791	45070791	16724991	1	418,	0,
#Deleted in new
chr10	45073145	45073541	chr10:45073145-45073541	7	-	45073145	45073145	16724991	1	396,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	45099486	45147892	chr10:45099486-45147892	5	-	45099486	45099486	16724991	7	1013,115,87,100,60,118,89,	0,7129,7510,16451,42608,47341,48317,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	45100079	45154596	chr10:45100079-45154596	7	-	45100079	45100079	16724991	9	420,115,83,103,79,60,118,127,135,	0,6536,6921,15858,26241,42015,46748,53760,54382,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	45100165	45107988	chr10:45100165-45107988	4	-	45100165	45100165	16724991	2	334,1373,	0,6450,
#Partially deleted in new
chr10	45106609	45116101	chr10:45106609-45116101	5	-	45106609	45106609	16724991	4	121,90,110,164,	0,391,2696,9328,
#Partially deleted in new
chr10	45127317	45148914	chr10:45127317-45148914	7	+	45127317	45127317	16724991	10	146,178,184,176,179,211,141,181,177,211,	0,2592,2930,8284,9635,12124,12986,14163,20149,21386,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	45147393	45171389	chr10:45147393-45171389	3	+	45147393	45147393	8553170	11	73,96,153,207,1034,111,65,405,31,79,1383,	0,188,441,1310,2232,4190,5444,9384,14718,22041,22613,
#Deleted in new
chr10	45151444	45151915	chr10:45151444-45151915	7	-	45151444	45151444	16724991	1	471,	0,
#Partially deleted in new
chr10	45156774	45176925	chr10:45156774-45176925	7	+	45156774	45156774	16724991	7	408,31,73,79,62,215,202,	0,5337,8145,14649,15038,17641,19949,
#Deleted in new
chr10	45164013	45164088	chr10:45164013-45164088	3	+	45164013	45164013	5263520	1	75,	0,
#Partially deleted in new
chr10	45164227	45181427	chr10:45164227-45181427	3	-	45164227	45164227	8553170	2	189,346,	0,16854,
#Deleted in new
chr10	45180399	45180616	chr10:45180399-45180616	7	+	45180399	45180399	16724991	1	217,	0,
#Partially deleted in new
chr10	45187291	45198323	chr10:45187291-45198323	7	-	45187291	45187291	16724991	5	249,138,174,114,207,	0,2821,6513,6849,10825,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	45188789	45188896	chr10:45188789-45188896	3	-	45188789	45188789	8553170	1	107,	0,
#Partially deleted in new
chr10	45232025	45247361	chr10:45232025-45247361	7	-	45232025	45232025	16724991	7	100,236,116,176,143,205,163,	0,3828,6192,9907,11124,14623,15173,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	45255639	45263252	chr10:45255639-45263252	7	+	45255639	45255639	16724991	2	129,4731,	0,2882,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	45255807	45263252	chr10:45255807-45263252	5	+	45255807	45255807	16724991	2	559,4731,	0,2714,
#Deleted in new
chr10	45258184	45259123	chr10:45258184-45259123	5	+	45258184	45258184	16724991	1	939,	0,
#Partially deleted in new
chr10	45302297	45308868	chr10:45302297-45308868	1	-	45303435	45304422	789624	4	2203,142,70,159,	0,5128,5441,6412,
#Partially deleted in new
chr10	45302653	45307838	chr10:45302653-45307838	1	-	45303435	45304422	789624	3	1781,142,100,	0,4772,5085,
#Partially deleted in new
chr10	45302653	45315608	chr10:45302653-45315608	3	-	45303435	45304422	789624	4	1781,142,70,85,	0,4772,5085,12870,
#Partially deleted in new
chr10	45374175	45446119	chr10:45374175-45446119	1	+	45374279	45445687	0	13	254,199,82,123,107,173,147,204,87,179,122,101,612,	0,8307,21679,38015,49865,50784,54442,66254,67168,68862,69240,69552,71332,
#Partially deleted in new
chr10	45374226	45446115	chr10:45374226-45446115	3	+	45374279	45445687	0	14	203,199,82,123,107,173,147,204,87,179,122,101,171,608,	0,8256,21628,37964,49814,50733,54391,66203,67117,68811,69189,69501,69889,71281,
#Partially deleted in new
chr10	45374279	45445687	chr10:45374279-45445687	1	+	45374279	45412259	789624	13	150,199,125,107,173,147,204,87,179,122,101,171,180,	0,8203,37909,49761,50680,54338,66150,67064,68758,69136,69448,69836,71228,
#Deleted in new
chr10	45424083	45428486	chr10:45424083-45428486	0	+	45424083	45424083	8553170	3	64,173,126,	0,876,4277,
#Deleted in new
chr10	45440429	45441585	chr10:45440429-45441585	0	+	45440429	45440429	8553170	2	204,242,	0,914,
#Deleted in new
chr10	45442612	45443447	chr10:45442612-45443447	0	+	45442612	45442612	8553170	2	604,32,	0,803,
#Deleted in new
chr10	45443241	45444232	chr10:45443241-45444232	0	+	45443241	45443241	8553170	3	296,101,117,	0,486,874,
#Deleted in new
chr10	45443420	45444214	chr10:45443420-45444214	0	+	45443420	45443420	8553170	2	117,487,	0,307,
#Partially deleted in new
chr10	45444569	45453121	chr10:45444569-45453121	3	-	45444569	45444569	789624	3	283,97,82,	0,8274,8470,
#Partially deleted in new
chr10	45454584	45535394	chr10:45454584-45535394	1	-	45458238	45533211	0	8	3959,148,181,846,89,51,180,184,	0,4535,6646,8566,9654,34782,78525,80626,
#Partially deleted in new
chr10	45454592	45594906	chr10:45454592-45594906	3	-	45458238	45533211	0	7	3951,148,181,89,51,180,672,	0,4527,6638,9646,34774,78517,139642,
#Partially deleted in new
chr10	45457505	45535371	chr10:45457505-45535371	1	-	45458238	45533211	0	7	1038,148,181,89,51,180,161,	0,1614,3725,6733,31861,75604,77705,
#Partially deleted in new
chr10	45457510	45462204	chr10:45457510-45462204	0	-	45457510	45457510	8553170	3	1033,148,974,	0,1609,3720,
#Partially deleted in new
chr10	45461082	45594577	chr10:45461082-45594577	0	-	45461082	45461082	8553170	5	329,89,51,180,343,	0,3156,28284,72027,133152,
#Partially deleted in new
chr10	45461386	45594491	chr10:45461386-45594491	0	-	45461386	45533211	789624	6	25,89,51,180,93,257,	0,2852,27980,71723,91725,132848,
#Deleted in new
chr10	45593429	45594598	chr10:45593429-45594598	0	-	45593429	45593429	8553170	2	195,364,	0,805,
#Partially deleted in new
chr10	45615500	45672732	chr10:45615500-45672732	1	-	45616435	45653021	789624	11	1071,121,55,1155,148,241,68,76,102,301,483,	0,2639,9082,10450,24315,32793,36465,37483,47079,48041,56749,
#Partially deleted in new
chr10	45615594	45672348	chr10:45615594-45672348	3	-	45616435	45663725	789624	10	977,121,55,1155,148,241,68,76,301,99,	0,2545,8988,10356,24221,32699,36371,37389,47947,56655,
#Partially deleted in new
chr10	45615598	45672752	chr10:45615598-45672752	1	-	45618154	45663725	789624	7	973,121,241,68,76,301,503,	0,2541,32695,36367,37385,47943,56651,
#Partially deleted in new
chr10	45616384	45649779	chr10:45616384-45649779	0	-	45616384	45616384	8553170	7	187,121,55,1155,148,241,48,	0,1755,8198,9566,23431,31909,33347,
#Partially deleted in new
chr10	45617764	45620927	chr10:45617764-45620927	0	-	45617764	45617764	8553170	2	496,148,	0,3015,
#Partially deleted in new
chr10	45639705	45672762	chr10:45639705-45672762	0	-	45640354	45663725	789624	7	258,181,241,68,76,301,84,	0,535,8588,12260,13278,23836,32973,
#Partially deleted in new
chr10	45648418	45672275	chr10:45648418-45672275	0	-	45662583	45663725	789624	6	116,68,76,102,301,26,	0,3547,4565,14161,15123,23831,
#Partially deleted in new
chr10	45648474	45672762	chr10:45648474-45672762	0	-	45648474	45648474	8553170	4	60,68,301,491,	0,3491,15067,23797,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	45650124	45672780	chr10:45650124-45672780	0	-	45650124	45650124	8553170	5	1501,68,76,301,102,	0,1841,2859,13417,22554,
#Partially deleted in new
chr10	45678691	45700532	chr10:45678691-45700532	7	+	45678691	45678691	16724991	7	349,69,35,100,36,52,1777,	0,3080,5794,13367,16056,19373,20064,
#Partially deleted in new
chr10	45706430	45722439	chr10:45706430-45722439	7	-	45706430	45706430	16724991	11	132,102,87,128,173,60,58,119,71,88,113,	0,2335,6453,8711,11032,11594,12875,13406,14563,15268,15896,
#Partially deleted in new
chr10	45718025	45727054	chr10:45718025-45727054	4	-	45718025	45718025	16724991	5	59,58,119,88,224,	0,1280,1811,3673,8805,
#Partially deleted in new
chr10	45719908	45727161	chr10:45719908-45727161	4	-	45719908	45719908	16724991	4	47,71,88,331,	0,1085,1790,6922,
#Partially deleted in new
chr10	45725693	45726038	chr10:45725693-45726038	7	-	45725693	45725693	16724991	1	345,	0,
#Partially deleted in new
chr10	45726275	45727231	chr10:45726275-45727231	5	-	45726275	45726275	16724991	1	956,	0,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr10	45727199	45792961	chr10:45727199-45792961	1	+	45727416	45792400	789624	29	121,123,63,174,94,62,48,111,88,72,119,58,60,180,128,87,102,132,164,103,153,183,129,81,123,213,621,178,701,	0,217,10783,12873,16190,17621,19400,22896,23551,24282,25388,25980,27286,27736,29812,32115,36188,38479,42255,46056,50073,51753,57365,57621,58309,59835,61671,63156,65061,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr10	45727218	45792961	chr10:45727218-45792961	3	+	45727317	45792400	789624	30	102,123,165,63,174,94,62,48,111,88,72,119,58,60,180,128,87,102,132,170,103,153,183,129,81,123,213,621,178,701,	0,198,1643,10764,12854,16171,17602,19381,22877,23532,24263,25369,25961,27267,27717,29793,32096,36169,38460,42230,46037,50054,51734,57346,57602,58290,59816,61652,63137,65042,
#Partially deleted in new
chr10	45727234	45792804	chr10:45727234-45792804	1	+	45727317	45792400	789624	29	86,123,165,63,174,94,62,48,111,88,72,119,58,60,180,128,87,102,132,170,103,153,183,129,81,213,621,178,544,	0,182,1627,10748,12838,16155,17586,19365,22861,23516,24247,25353,25945,27251,27701,29777,32080,36153,38444,42214,46021,50038,51718,57330,57586,59800,61636,63121,65026,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr10	45727235	45792961	chr10:45727235-45792961	1	+	45727317	45792400	789624	31	85,123,165,63,174,94,62,48,111,88,72,119,58,60,178,130,87,102,132,170,103,153,183,129,81,123,63,213,621,178,701,	0,181,1626,10747,12837,16154,17585,19364,22860,23515,24246,25352,25944,27250,27700,29774,32079,36152,38443,42213,46020,50037,51717,57329,57585,58273,59376,59799,61635,63120,65025,
#Partially deleted in new
chr10	45727235	45792620	chr10:45727235-45792620	1	+	45727317	45792400	789624	28	85,123,165,63,174,94,62,48,111,88,119,58,60,180,128,87,102,132,170,103,183,129,81,123,213,621,178,360,	0,181,1626,10747,12837,16154,17585,19364,22860,23515,25352,25944,27250,27700,29776,32079,36152,38443,42213,46020,51717,57329,57585,58273,59799,61635,63120,65025,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr10	45727263	45792936	chr10:45727263-45792936	1	+	45727317	45792400	789624	31	57,123,165,63,174,94,62,48,111,88,72,119,58,60,180,128,87,102,132,170,103,153,183,129,81,123,63,213,621,178,676,	0,153,1598,10719,12809,16126,17557,19336,22832,23487,24218,25324,25916,27222,27672,29748,32051,36124,38415,42185,45992,50009,51689,57301,57557,58245,59348,59771,61607,63092,64997,
#Partially deleted in new
chr10	45727287	45751553	chr10:45727287-45751553	0	+	45727317	45751553	789624	10	33,123,63,174,94,62,48,111,88,72,	0,129,10695,12785,16102,17533,19312,22808,23463,24194,
#Partially deleted in new
chr10	45740190	45744943	chr10:45740190-45744943	0	+	45740190	45740190	8553170	3	56,94,123,	0,3199,4630,
#Partially deleted in new
chr10	45779015	45785963	chr10:45779015-45785963	0	+	45779015	45779015	8553170	4	120,129,81,455,	0,5549,5805,6493,
#Partially deleted in new
chr10	45786369	45792601	chr10:45786369-45792601	0	+	45786369	45786369	8553170	4	878,621,178,341,	0,2501,3986,5891,
#Partially deleted in new
chr10	45812647	45812944	chr10:45812647-45812944	7	-	45812647	45812647	16724991	1	297,	0,
#Partially deleted in new
chr10	45815427	45817324	chr10:45815427-45817324	7	-	45815427	45815427	16724991	2	192,130,	0,1767,
#Partially deleted in new
chr10	45815485	45817249	chr10:45815485-45817249	5	-	45815485	45815485	16724991	2	134,55,	0,1709,
#Partially deleted in new
chr10	45825593	45847473	chr10:45825593-45847473	3	-	45825914	45847347	789624	7	1797,52,36,101,35,69,349,	0,2435,5800,8422,16059,18732,21531,
#Partially deleted in new
chr10	45825601	45847757	chr10:45825601-45847757	1	-	45825914	45847347	789624	7	1789,52,36,101,35,69,633,	0,2427,5792,8414,16051,21085,21523,
#Partially deleted in new
chr10	45825601	45847757	chr10:45825601-45847757	1	-	45825914	45847347	789624	8	1789,52,36,101,35,71,67,633,	0,2427,5792,8414,16051,18724,21087,21523,
#Partially deleted in new
chr10	45825693	45847459	chr10:45825693-45847459	1	-	45825991	45847347	789624	10	346,3,1341,52,36,101,35,69,69,335,	0,348,356,2335,5700,8322,15959,18632,20993,21431,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	45827339	45853875	chr10:45827339-45853875	0	-	45827339	45827339	8553170	10	51,52,36,101,69,69,188,95,70,221,	0,689,4054,6676,16986,19347,19785,20520,21503,26315,
#Partially deleted in new
chr10	45831393	45847227	chr10:45831393-45847227	0	-	45831393	45847227	789624	6	36,101,35,69,69,103,	0,2622,10259,12932,15293,15731,
#Partially deleted in new
chr10	45841525	45844503	chr10:45841525-45844503	0	-	45841525	45841525	8553170	2	162,178,	0,2800,
#Partially deleted in new
chr10	45844265	45847326	chr10:45844265-45847326	0	-	45844265	45844265	8553170	3	129,69,202,	0,2421,2859,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	45854092	45892483	chr10:45854092-45892483	5	-	45854092	45854092	16724991	5	368,93,129,148,52,	0,710,8893,34072,38339,
#Partially deleted in new
chr10	45854713	45863363	chr10:45854713-45863363	4	-	45854713	45854713	16724991	2	182,378,	0,8272,
#Deleted in new
chr10	45856306	45856422	chr10:45856306-45856422	7	+	45856306	45856306	16724991	1	116,	0,
#Partially deleted in new
chr10	45888164	45972154	chr10:45888164-45972154	7	-	45888164	45888164	16724991	12	148,76,61,80,158,93,75,84,123,184,987,217,	0,4267,8019,12182,22384,27914,58672,64958,65169,74646,75720,83773,
#Deleted in new
chr10	45940521	45940851	chr10:45940521-45940851	7	+	45940521	45940521	16724991	1	330,	0,
#Partially deleted in new
chr10	45972448	46003734	chr10:45972448-46003734	3	+	45972624	46003318	789624	7	282,59,94,85,59,111,532,	0,3005,10074,10397,12934,16288,30754,
#Deleted in new
chr10	45984609	45984810	chr10:45984609-45984810	3	+	45984609	45984609	5263520	1	201,	0,
#Partially deleted in new
chr10	46005087	46023455	chr10:46005087-46023455	1	-	46006591	46016680	0	10	1510,141,984,144,90,109,89,141,155,126,	0,4323,5135,7795,8462,9356,9766,10038,11452,18242,
#Partially deleted in new
chr10	46005090	46030714	chr10:46005090-46030714	1	-	46006591	46016680	0	10	1507,141,984,144,90,109,89,141,155,189,	0,4320,5132,7792,8459,9353,9763,10035,11449,25435,
#Partially deleted in new
chr10	46006172	46030615	chr10:46006172-46030615	1	-	46006591	46015196	789624	8	425,141,984,144,90,109,141,90,	0,3238,4050,6710,7377,8271,8953,24353,
#Partially deleted in new
chr10	46006294	46019537	chr10:46006294-46019537	1	-	46006591	46016680	0	10	303,141,984,144,90,109,89,141,155,215,	0,3116,3928,6588,7255,8149,8559,8831,10245,13028,
#Partially deleted in new
chr10	46006377	46030592	chr10:46006377-46030592	1	-	46006591	46013621	789624	7	220,141,984,144,90,109,67,	0,3033,3845,6505,7172,8066,24148,
#Partially deleted in new
chr10	46006411	46030607	chr10:46006411-46030607	3	-	46009146	46027465	0	12	186,89,141,984,144,90,109,89,141,155,97,82,	0,2712,2999,3811,6471,7138,8032,8442,8714,10128,21020,24114,
#Partially deleted in new
chr10	46006426	46030615	chr10:46006426-46030615	1	-	46006591	46027465	0	11	171,141,984,144,90,109,89,141,155,97,90,	0,2984,3796,6456,7123,8017,8427,8699,10113,21005,24099,
#Partially deleted in new
chr10	46033306	46046269	chr10:46033306-46046269	1	-	46033426	46046237	0	3	245,106,35,	0,6679,12928,
#Partially deleted in new
chr10	46033310	46046269	chr10:46033310-46046269	3	-	46033421	46046237	0	4	241,106,106,35,	0,5655,6675,12924,
#Deleted in new
chr10	46063249	46063715	chr10:46063249-46063715	7	+	46063249	46063249	16724991	1	466,	0,
#Partially deleted in new
chr10	46109620	46131358	chr10:46109620-46131358	7	+	46109620	46109620	16724991	8	223,70,69,35,101,36,52,1476,	0,592,2959,5674,13549,16243,19574,20262,
#Partially deleted in new
chr10	46233884	46273557	chr10:46233884-46273557	7	-	46233884	46233884	16724991	14	537,86,175,90,214,76,70,99,61,81,69,80,117,74,	0,15001,16649,18277,18865,20136,20732,29625,34741,34892,35351,35497,36987,39599,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	46286344	46296094	chr10:46286344-46296094	0	+	46292094	46296094	789624	5	104,166,72,72,76,	0,1000,5713,7484,9674,
#Partially deleted in new
chr10	46286996	46330106	chr10:46286996-46330106	1	+	46287262	46330106	789624	19	514,72,72,82,34,77,69,81,61,99,70,79,90,39,156,81,87,97,104,	0,5061,6832,9022,9222,10255,10409,10834,11005,15725,19806,20405,22116,23464,24513,26239,42602,42847,43006,
#Partially deleted in new
chr10	46286997	46330207	chr10:46286997-46330207	0	+	46292094	46308472	789624	20	44,171,72,72,82,34,77,69,81,61,99,70,79,209,90,39,156,81,146,393,	0,342,5060,6831,9021,9221,10254,10408,10833,11004,15724,19805,20404,21460,22115,23463,24512,26238,42601,42817,
#Partially deleted in new
chr10	46286997	46330129	chr10:46286997-46330129	3	+	46287262	46330084	789624	17	513,72,72,82,34,77,69,81,61,99,70,79,90,39,156,81,531,	0,5060,6831,9021,9221,10254,10408,10833,11004,15724,19805,20404,22115,23463,24512,26238,42601,
#Deleted in new
chr10	46292809	46294110	chr10:46292809-46294110	0	+	46292809	46292809	8553170	2	291,282,	0,1019,
#Partially deleted in new
chr10	46297403	46310499	chr10:46297403-46310499	0	+	46297403	46307427	789624	6	71,81,61,99,79,39,	0,427,598,5318,9998,13057,
#Partially deleted in new
chr10	46337223	46358714	chr10:46337223-46358714	7	+	46337223	46337223	16724991	8	223,69,69,35,101,36,51,1476,	0,592,2964,5682,13294,15982,19319,20015,
#Partially deleted in new
chr10	46369112	46373508	chr10:46369112-46373508	7	+	46369112	46369112	16724991	3	73,63,132,	0,2026,4264,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	46370346	46373563	chr10:46370346-46373563	5	+	46370346	46370346	16724991	3	154,63,187,	0,792,3030,
#Partially deleted in new
chr10	46370758	46382626	chr10:46370758-46382626	3	+	46370758	46370758	8553170	5	201,63,91,95,48,	0,380,9126,10387,11820,
#Partially deleted in new
chr10	46371071	46373558	chr10:46371071-46373558	4	+	46371071	46371071	16724991	2	130,182,	0,2305,
#Partially deleted in new
chr10	46371138	46375940	chr10:46371138-46375940	0	+	46371138	46371138	8553170	2	63,176,	0,4626,
#Partially deleted in new
chr10	46375626	46391781	chr10:46375626-46391781	1	+	46375851	46390930	789624	12	246,91,209,114,91,80,60,94,96,59,123,911,	0,4258,5405,6952,7829,8579,9147,9753,10085,11959,12766,15244,
#Partially deleted in new
chr10	46375626	46391781	chr10:46375626-46391781	1	+	46375851	46390930	789624	10	246,114,91,80,60,94,96,59,123,911,	0,6952,7829,8579,9147,9753,10085,11959,12766,15244,
#Partially deleted in new
chr10	46375675	46391784	chr10:46375675-46391784	1	+	46375851	46390930	789624	9	197,91,209,114,60,94,59,123,914,	0,4209,5356,6903,9098,9704,11910,12717,15195,
#Partially deleted in new
chr10	46375726	46390930	chr10:46375726-46390930	3	+	46375851	46390930	789624	12	146,91,95,114,91,80,60,94,96,59,123,60,	0,4158,5419,6852,7729,8479,9047,9653,9985,11859,12666,15144,
#Partially deleted in new
chr10	46375755	46391419	chr10:46375755-46391419	1	+	46375851	46390930	789624	10	117,91,95,114,60,94,96,59,123,549,	0,4129,5390,6823,9018,9624,9956,11830,12637,15115,
#Partially deleted in new
chr10	46375775	46381923	chr10:46375775-46381923	0	+	46375775	46375775	8553170	3	97,91,778,	0,4109,5370,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	46398361	46453306	chr10:46398361-46453306	3	+	46398361	46398361	789624	4	432,127,119,2194,	0,51686,51991,52751,
#Deleted in new
chr10	46415852	46416413	chr10:46415852-46416413	7	+	46415852	46415852	16724991	1	561,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	46461098	46465881	chr10:46461098-46465881	1	-	46461507	46462635	0	3	1596,156,204,	0,2631,4579,
#Partially deleted in new
chr10	46461098	46465881	chr10:46461098-46465881	3	-	46461507	46462635	0	2	1596,204,	0,4579,
#Partially deleted in new
chr10	46549043	46555530	chr10:46549043-46555530	3	-	46549359	46550736	789624	3	1699,111,156,	0,5541,6331,
#Partially deleted in new
chr10	46549048	46550744	chr10:46549048-46550744	1	-	46549359	46550736	789624	1	1696,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	46578216	46592062	chr10:46578216-46592062	1	+	46578804	46587647	789624	7	959,143,296,171,121,180,4558,	0,2677,3679,5515,6278,7381,9288,
#Partially deleted in new
chr10	46579083	46583838	chr10:46579083-46583838	0	+	46579168	46583838	789624	3	92,296,107,	0,2812,4648,
#Partially deleted in new
chr10	46579101	46587683	chr10:46579101-46587683	3	+	46579168	46587647	789624	8	74,205,143,296,171,121,180,179,	0,1062,1792,2794,4630,5393,6496,8403,
#Partially deleted in new
chr10	46579132	46590499	chr10:46579132-46590499	1	+	46579168	46589648	789624	9	43,205,143,296,171,121,180,75,97,	0,1031,1761,2763,4599,5362,6465,10466,11270,
#Partially deleted in new
chr10	46582170	46594173	chr10:46582170-46594173	0	+	46582170	46589648	789624	6	21,171,121,180,75,185,	0,1561,2324,3427,7428,11818,
#Partially deleted in new
chr10	46582781	46598145	chr10:46582781-46598145	3	-	46582781	46582781	789624	2	357,312,	0,15052,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	46587889	46593626	chr10:46587889-46593626	0	+	46587889	46587889	8553170	3	123,75,340,	0,1709,5397,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	46596008	46598064	chr10:46596008-46598064	1	-	46596008	46596008	8553170	2	322,231,	0,1825,
#Partially deleted in new
chr10	46597917	46612154	chr10:46597917-46612154	3	+	46597917	46597917	8553170	2	123,246,	0,13991,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	46601908	46612009	chr10:46601908-46612009	0	+	46601908	46601908	8553170	3	607,164,101,	0,7183,10000,
#Partially deleted in new
chr10	46602064	46612009	chr10:46602064-46612009	0	+	46602064	46602064	8553170	2	451,101,	0,9844,
#Partially deleted in new
chr10	46602096	46612005	chr10:46602096-46612005	0	+	46602096	46602096	8553170	4	419,43,164,97,	0,5630,6995,9812,
#Partially deleted in new
chr10	46602289	46609122	chr10:46602289-46609122	1	+	46602289	46602289	8553170	3	226,394,31,	0,5086,6802,
#Partially deleted in new
chr10	46602354	46612154	chr10:46602354-46612154	1	+	46602354	46602354	8553170	2	161,246,	0,9554,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	46605208	46611958	chr10:46605208-46611958	0	+	46605208	46605208	8553170	3	433,164,50,	0,3883,6700,
#Partially deleted in new
chr10	46610473	46652025	chr10:46610473-46652025	7	-	46610473	46610473	16724991	8	976,116,229,207,135,194,108,1579,	0,4256,11132,15333,20479,20781,34702,39973,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	46611120	46612009	chr10:46611120-46612009	0	+	46611120	46611120	8553170	1	889,	0,
#Partially deleted in new
chr10	46625928	46635145	chr10:46625928-46635145	4	-	46625928	46625928	16724991	4	85,135,194,208,	0,5024,5326,9009,
#Partially deleted in new
chr10	46632386	46635472	chr10:46632386-46635472	3	+	46632386	46632386	8553170	4	69,83,292,107,	0,630,2422,2979,
#Partially deleted in new
chr10	46634910	46635466	chr10:46634910-46635466	7	-	46634910	46634910	16724991	1	556,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	46648947	46649276	chr10:46648947-46649276	3	+	46648947	46648947	8553170	1	329,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	46740570	46751733	chr10:46740570-46751733	3	+	46740570	46740570	8553170	3	222,154,823,	0,9529,10340,
#Partially deleted in new
chr10	46753604	46758198	chr10:46753604-46758198	7	+	46753604	46753604	16724991	3	313,59,121,	0,1229,4473,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	46756990	46759740	chr10:46756990-46759740	5	+	46756990	46756990	16724991	4	160,137,120,687,	0,1087,1843,2063,
#Partially deleted in new
chr10	46758088	46759199	chr10:46758088-46759199	5	+	46758088	46758088	16724991	3	126,120,146,	0,745,965,
#Partially deleted in new
chr10	46759018	46784204	chr10:46759018-46784204	5	-	46759018	46759018	16724991	7	142,84,64,56,81,60,119,	0,9190,11720,13410,17734,19638,25067,
#Partially deleted in new
chr10	46759022	46786770	chr10:46759022-46786770	7	-	46759022	46759022	16724991	6	138,84,64,56,81,63,	0,9186,11716,13406,17730,27685,
#Partially deleted in new
chr10	46770738	46776833	chr10:46770738-46776833	5	-	46770738	46770738	16724991	3	64,56,81,	0,1690,6014,
#Partially deleted in new
chr10	46774420	46776180	chr10:46774420-46776180	7	-	46774420	46774420	16724991	1	1760,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	46786673	46811989	chr10:46786673-46811989	7	+	46786673	46786673	16724991	9	227,204,190,80,189,148,122,140,2994,	0,1723,2823,4288,8053,9132,9998,11355,22322,
#Partially deleted in new
chr10	46788396	46799819	chr10:46788396-46799819	5	+	46788396	46788396	16724991	9	204,190,80,189,141,122,188,140,78,	0,1100,2565,6330,7408,8275,8735,9632,11345,
#Partially deleted in new
chr10	46807457	46807573	chr10:46807457-46807573	7	-	46807457	46807457	16724991	1	116,	0,
#Partially deleted in new
chr10	46816515	46832476	chr10:46816515-46832476	7	+	46816515	46816515	16724991	4	223,69,35,36,	0,2952,5662,15925,
#Partially deleted in new
chr10	46870857	46894562	chr10:46870857-46894562	7	+	46870857	46870857	16724991	9	207,105,94,86,148,215,99,344,49,	0,2858,5074,6058,7921,9806,12326,17357,23656,
#Partially deleted in new
chr10	46911395	47002322	chr10:46911395-47002322	1	+	46946578	47000710	789624	4	106,113,63,1647,	0,35167,88516,89280,
#Partially deleted in new
chr10	46911427	47002322	chr10:46911427-47002322	1	+	46946578	47000710	789624	5	74,98,113,63,1647,	0,32490,35135,88484,89248,
#Partially deleted in new
chr10	46911427	46999950	chr10:46911427-46999950	0	+	46946578	46999950	789624	6	74,98,113,152,91,39,	0,32490,35135,53558,56529,88484,
#Partially deleted in new
chr10	46911434	47002320	chr10:46911434-47002320	1	+	46932499	47000710	789624	9	67,157,95,98,113,152,91,63,1645,	0,20942,29188,32483,35128,53551,56522,88477,89241,
#Partially deleted in new
chr10	46911437	47002320	chr10:46911437-47002320	1	+	46946578	47000741	789624	10	64,95,98,113,152,91,335,216,63,1645,	0,29185,32480,35125,53548,56519,72792,75902,88474,89238,
#Partially deleted in new
chr10	46911437	47002322	chr10:46911437-47002322	1	+	46946578	47000741	789624	9	64,98,113,152,91,335,216,63,1647,	0,32480,35125,53548,56519,72792,75902,88474,89238,
#Partially deleted in new
chr10	46911437	47002320	chr10:46911437-47002320	1	+	46946578	47000710	789624	7	64,98,113,152,91,63,1645,	0,32480,35125,53548,56519,88474,89238,
#Partially deleted in new
chr10	46911780	47000789	chr10:46911780-47000789	1	+	46911835	47000741	789624	5	62,335,216,63,114,	0,72449,75559,88131,88895,
#Partially deleted in new
chr10	46911780	47000789	chr10:46911780-47000789	1	+	46932499	47000741	789624	8	62,157,95,98,113,152,63,114,	0,20596,28842,32137,34782,53205,88131,88895,
#Partially deleted in new
chr10	46911780	47000789	chr10:46911780-47000789	1	+	46911835	47000710	789624	6	62,95,98,113,63,114,	0,28842,32137,34782,88131,88895,
#Partially deleted in new
chr10	46911780	47000789	chr10:46911780-47000789	1	+	46946578	47000741	789624	9	62,98,113,152,91,335,216,63,114,	0,32137,34782,53205,56176,72449,75559,88131,88895,
#Partially deleted in new
chr10	46911780	47000789	chr10:46911780-47000789	1	+	46946578	47000741	789624	10	62,157,98,113,152,91,335,216,63,114,	0,20596,32137,34782,53205,56176,72449,75559,88131,88895,
#Partially deleted in new
chr10	46911780	47000789	chr10:46911780-47000789	1	+	46946578	47000710	789624	6	62,136,98,113,63,114,	0,28801,32137,34782,88131,88895,
#Partially deleted in new
chr10	46911780	47000789	chr10:46911780-47000789	1	+	46932499	47000710	789624	9	62,157,95,98,113,152,91,63,114,	0,20596,28842,32137,34782,53205,56176,88131,88895,
#Partially deleted in new
chr10	46911780	47000789	chr10:46911780-47000789	1	+	46911835	47000710	789624	8	62,95,98,113,152,91,63,114,	0,28842,32137,34782,53205,56176,88131,88895,
#Partially deleted in new
chr10	46911780	47000789	chr10:46911780-47000789	1	+	46946578	47000710	789624	7	62,98,113,152,91,63,114,	0,32137,34782,53205,56176,88131,88895,
#Partially deleted in new
chr10	46911780	47000789	chr10:46911780-47000789	0	+	46946578	46984295	789624	8	62,98,113,152,335,216,63,114,	0,32137,34782,53205,72449,75559,88131,88895,
#Partially deleted in new
chr10	46911780	47000789	chr10:46911780-47000789	1	+	46911835	47000741	789624	10	62,95,98,113,152,91,335,216,63,114,	0,28842,32137,34782,53205,56176,72449,75559,88131,88895,
#Partially deleted in new
chr10	46911780	47000789	chr10:46911780-47000789	1	+	46911835	47000741	789624	8	62,95,98,113,152,216,63,114,	0,28842,32137,34782,53205,75559,88131,88895,
#Partially deleted in new
chr10	46911780	47000789	chr10:46911780-47000789	1	+	46946578	47000710	789624	5	62,98,113,63,114,	0,32137,34782,88131,88895,
#Partially deleted in new
chr10	46911780	47000789	chr10:46911780-47000789	1	+	46946578	47000741	789624	7	62,98,113,152,216,63,114,	0,32137,34782,53205,75559,88131,88895,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	46920900	46981654	chr10:46920900-46981654	0	+	46946578	46947932	789624	7	305,98,113,115,152,91,339,	0,23017,25662,26940,44085,47056,60415,
#Partially deleted in new
chr10	46925997	46943992	chr10:46925997-46943992	0	+	46932499	46943992	789624	4	130,157,95,75,	0,6379,14625,17920,
#Partially deleted in new
chr10	46932416	47000788	chr10:46932416-47000788	1	+	46932499	47000710	789624	6	117,95,98,113,63,113,	0,8206,11501,14146,67495,68259,
#Partially deleted in new
chr10	46932416	47000788	chr10:46932416-47000788	1	+	46946578	47000710	789624	6	117,136,98,113,63,113,	0,8165,11501,14146,67495,68259,
#Partially deleted in new
chr10	46932422	47000789	chr10:46932422-47000789	3	+	46932499	47000741	789624	10	111,95,98,113,152,91,335,216,63,114,	0,8200,11495,14140,32563,35534,51807,54917,67489,68253,
#Partially deleted in new
chr10	46932422	47000789	chr10:46932422-47000789	1	+	46946578	47000710	789624	7	111,98,113,152,91,63,114,	0,11495,14140,32563,35534,67489,68253,
#Partially deleted in new
chr10	46932465	46946842	chr10:46932465-46946842	0	+	46932465	46932465	8553170	3	68,98,280,	0,11452,14097,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	46940581	47002488	chr10:46940581-47002488	0	+	46946578	46955187	789624	10	136,98,113,108,152,91,335,216,63,1813,	0,3336,5981,14514,24404,27375,43648,46758,59330,60094,
#Partially deleted in new
chr10	47300385	47313547	chr10:47300385-47313547	3	+	47300651	47312792	789624	3	585,926,947,	0,9410,12215,
#Deleted in new
chr10	47322489	47326270	chr10:47322489-47326270	3	+	47322668	47325784	0	2	525,1430,	0,2351,
#Partially deleted in new
chr10	47348370	47357875	chr10:47348370-47357875	3	+	47348484	47357457	789624	4	3168,191,143,774,	0,4954,7005,8731,
#Partially deleted in new
chr10	47365495	47384273	chr10:47365495-47384273	3	-	47367806	47368829	789624	2	3442,54,	0,18724,
#Partially deleted in new
chr10	47365501	47384261	chr10:47365501-47384261	1	-	47367806	47368508	789624	3	3035,295,42,	0,3141,18718,
#Partially deleted in new
chr10	47460161	47484083	chr10:47460161-47484083	1	-	47461916	47483933	789624	2	1800,171,	0,23751,
#Deleted in new
chr10	47460190	47462683	chr10:47460190-47462683	0	-	47460190	47460190	8553170	2	1771,101,	0,2392,
#Partially deleted in new
chr10	47467992	47484108	chr10:47467992-47484108	1	-	47468846	47483933	789624	9	914,123,59,94,60,114,209,91,196,	0,3269,4140,6312,6952,9088,10540,11805,15920,
#Partially deleted in new
chr10	47467992	47484055	chr10:47467992-47484055	3	-	47468846	47483933	0	12	914,123,59,96,94,60,80,91,114,95,91,143,	0,3269,4140,5977,6312,6952,7500,8239,9088,10540,11805,15920,
#Partially deleted in new
chr10	47467995	47484158	chr10:47467995-47484158	1	-	47468846	47483933	0	10	911,123,59,96,94,60,80,91,114,246,	0,3266,4137,5974,6309,6949,7497,8236,9085,15917,
#Partially deleted in new
chr10	47467995	47484158	chr10:47467995-47484158	1	-	47468846	47483933	789624	12	911,123,59,96,94,60,80,91,114,209,91,246,	0,3266,4137,5974,6309,6949,7497,8236,9085,10537,11802,15917,
#Partially deleted in new
chr10	47468540	47484016	chr10:47468540-47484016	0	-	47474990	47483933	0	12	107,137,123,59,96,94,60,91,114,95,91,104,	0,229,2721,3592,5429,5764,6404,7691,8540,9992,11257,15372,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	47477655	47484062	chr10:47477655-47484062	0	-	47477655	47477655	8553170	3	972,91,150,	0,2142,6257,
#Deleted in new
chr10	47484456	47484754	chr10:47484456-47484754	7	-	47484456	47484456	16724991	1	298,	0,
#Partially deleted in new
chr10	47487218	47491693	chr10:47487218-47491693	3	-	47487274	47491674	789624	3	190,63,92,	0,2367,4383,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	47487218	47490407	chr10:47487218-47490407	0	-	47487218	47487218	8553170	3	190,63,121,	0,2367,3068,
#Partially deleted in new
chr10	47496211	47502195	chr10:47496211-47502195	3	+	47496211	47496211	8553170	2	87,147,	0,5837,
#Partially deleted in new
chr10	47501853	47523638	chr10:47501853-47523638	3	-	47502151	47523526	789624	8	1690,52,36,101,35,69,69,335,	0,2335,5694,8317,15969,18645,21012,21450,
#Partially deleted in new
chr10	47517815	47553483	chr10:47517815-47553483	3	-	47517815	47517815	8553170	12	42,69,69,188,140,122,141,189,80,190,209,155,	0,2683,5050,5488,24351,25726,26573,27616,31489,32842,33928,35513,
#Partially deleted in new
chr10	47523357	47553514	chr10:47523357-47553514	0	-	47523357	47523357	8553170	9	134,140,122,141,189,80,190,209,36,	0,18809,20184,21031,22074,25947,27300,28386,30121,
#Deleted in new
chr10	47532351	47532467	chr10:47532351-47532467	7	+	47532351	47532351	16724991	1	116,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	47538376	47551954	chr10:47538376-47551954	7	-	47538376	47538376	16724991	8	785,140,122,141,189,80,190,211,	0,3790,5165,6012,7055,10928,12281,13367,
#Partially deleted in new
chr10	47540076	47551919	chr10:47540076-47551919	5	-	47540076	47540076	16724991	9	107,140,188,122,141,189,80,190,176,	0,2090,2939,3465,4312,5355,9228,10581,11667,
#Partially deleted in new
chr10	47563603	47569697	chr10:47563603-47569697	7	+	47563603	47563603	16724991	3	81,56,66,	0,4349,6028,
#Deleted in new
chr10	47564255	47566016	chr10:47564255-47566016	7	+	47564255	47564255	16724991	1	1761,	0,
#Partially deleted in new
chr10	47581210	47582321	chr10:47581210-47582321	7	-	47581210	47581210	16724991	3	148,120,126,	0,248,985,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	47588680	47599830	chr10:47588680-47599830	3	-	47588680	47588680	8553170	3	828,181,197,	0,1458,10953,
#Deleted in new
chr10	47589177	47590330	chr10:47589177-47590330	0	-	47589177	47589177	8553170	2	331,165,	0,988,
#Partially deleted in new
chr10	47689706	47730436	chr10:47689706-47730436	7	+	47689706	47689706	16724991	8	1523,108,194,135,207,229,116,200,	0,6696,20514,20875,25944,30126,37134,40530,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	47692398	47692727	chr10:47692398-47692727	3	-	47692398	47692398	8553170	1	329,	0,
#Partially deleted in new
chr10	47706202	47706802	chr10:47706202-47706802	7	+	47706202	47706202	16724991	1	600,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	47750863	47763592	chr10:47750863-47763592	3	-	47754171	47763004	789624	7	3451,180,121,171,296,143,959,	0,5179,6344,7057,8768,9923,11770,
#Partially deleted in new
chr10	47752136	47762793	chr10:47752136-47762793	1	-	47752172	47762640	8553170	8	86,180,121,171,296,143,205,160,	0,3906,5071,5784,7495,8650,9304,10497,
#Partially deleted in new
chr10	47754134	47762707	chr10:47754134-47762707	0	-	47754171	47762707	789624	8	180,180,121,171,296,143,205,74,	0,1908,3073,3786,5497,6652,7306,8499,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	47918738	47923524	chr10:47918738-47923524	1	+	47921987	47923115	8553170	3	204,156,1596,	0,1999,3190,
#Partially deleted in new
chr10	47918738	47923524	chr10:47918738-47923524	3	+	47921987	47923115	789624	2	204,1596,	0,3190,
#Partially deleted in new
chr10	47934347	47985987	chr10:47934347-47985987	0	-	47934347	47934347	8553170	2	240,132,	0,51508,
#Deleted in new
chr10	47970042	47973496	chr10:47970042-47973496	3	-	47970042	47970042	8553170	2	455,371,	0,3083,
#Partially deleted in new
chr10	47985518	47991850	chr10:47985518-47991850	1	-	47985518	47985518	8553170	2	1791,171,	0,6161,
#Partially deleted in new
chr10	47995354	47999791	chr10:47995354-47999791	3	-	47995377	47999765	789624	3	157,63,99,	0,2322,4338,
#Partially deleted in new
chr10	48009872	48031599	chr10:48009872-48031599	7	-	48009872	48009872	16724991	8	1773,52,36,101,35,69,69,224,	0,2403,5774,8395,16024,18699,21065,21503,
#Partially deleted in new
chr10	48010131	48031640	chr10:48010131-48031640	5	-	48010131	48010131	16724991	8	1514,52,36,101,35,69,69,265,	0,2144,5515,8136,15765,18440,20806,21244,
#Partially deleted in new
chr10	48040461	48040577	chr10:48040461-48040577	7	+	48040461	48040461	16724991	1	116,	0,
#Partially deleted in new
chr10	48050281	48060016	chr10:48050281-48060016	7	-	48050281	48050281	16724991	7	140,122,141,189,80,190,190,	0,1375,2222,3265,7104,8459,9545,
#Partially deleted in new
chr10	48064307	48119455	chr10:48064307-48119455	7	-	48064307	48064307	16724991	7	214,91,152,113,98,95,157,	0,19496,22406,40849,43509,46810,54991,
#Partially deleted in new
chr10	48153087	48192938	chr10:48153087-48192938	0	-	48153087	48153087	8553170	16	201,245,282,344,99,215,148,86,94,105,206,117,108,93,101,255,	0,2371,3005,10240,15507,17906,19858,21782,22758,24959,27715,31478,31686,32465,34104,39596,
#Partially deleted in new
chr10	48155311	48274689	chr10:48155311-48274689	0	-	48242302	48274567	789624	28	392,282,344,99,215,148,86,94,105,206,117,108,93,101,211,157,186,156,139,148,175,72,133,88,133,192,126,147,	0,781,8016,13283,15682,17634,19558,20534,22735,25491,29254,29462,30241,31880,37372,45916,51436,56642,67001,67811,76803,81170,82679,84293,85048,86849,96254,119231,
#Partially deleted in new
chr10	48155672	48274567	chr10:48155672-48274567	1	-	48155672	48274567	789624	30	31,282,344,99,215,148,86,94,105,206,117,108,93,101,211,157,186,156,139,148,175,72,133,88,133,192,66,158,126,25,	0,420,7655,12922,15321,17273,19197,20173,22374,25130,28893,29101,29880,31519,37011,45555,51075,56281,66640,67450,76442,80809,82318,83932,84687,86488,89111,93348,95893,118870,
#Partially deleted in new
chr10	48156557	48274870	chr10:48156557-48274870	3	-	48157321	48274567	789624	29	813,344,99,215,148,86,94,105,206,117,108,93,101,211,157,186,156,139,148,175,72,133,88,133,192,66,158,126,328,	0,6770,12037,14436,16388,18312,19288,21489,24245,28008,28216,28995,30634,36126,44670,50190,55396,65755,66565,75557,79924,81433,83047,83802,85603,88226,92463,95008,117985,
#Partially deleted in new
chr10	48156557	48176212	chr10:48156557-48176212	0	-	48156557	48156557	8553170	8	813,344,99,215,148,86,94,160,	0,6770,12037,14436,16388,18312,19288,19495,
#Partially deleted in new
chr10	48156558	48251757	chr10:48156558-48251757	1	-	48157321	48251710	789624	27	812,344,99,215,148,86,94,105,206,117,108,93,101,211,157,186,153,139,148,175,72,133,88,133,192,158,192,	0,6769,12036,14435,16387,18311,19287,21488,24244,28007,28215,28994,30633,36125,44669,50189,55395,65754,66564,75556,79923,81432,83046,83801,85602,92462,95007,
#Partially deleted in new
chr10	48156766	48175143	chr10:48156766-48175143	0	-	48156766	48156766	8553170	6	604,344,99,215,148,274,	0,6561,11828,14227,16179,18103,
#Partially deleted in new
chr10	48158892	48178890	chr10:48158892-48178890	0	-	48158892	48158892	8553170	9	346,344,99,215,148,86,94,440,73,	0,4435,9702,12101,14053,15977,16953,18819,19925,
#Deleted in new
chr10	48174894	48176345	chr10:48174894-48176345	0	-	48174894	48174894	8553170	2	61,500,	0,951,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr10	48177292	48274674	chr10:48177292-48274674	0	-	48177292	48177292	8553170	20	859,206,117,108,93,101,211,157,186,153,175,72,133,88,133,192,66,158,126,132,	0,3510,7273,7481,8260,9899,15391,23935,29455,34661,54822,59189,60698,62312,63067,64868,67491,71728,74273,97250,
#Partially deleted in new
chr10	48187193	48201448	chr10:48187193-48201448	0	-	48187193	48187193	8553170	3	99,211,221,	0,5490,14034,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	48199667	48201654	chr10:48199667-48201654	0	-	48199667	48199667	8553170	2	179,427,	0,1560,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	48242045	48251653	chr10:48242045-48251653	0	-	48242045	48242045	8553170	4	307,66,158,88,	0,2738,6975,9520,
#Deleted in new
chr10	48246524	48248512	chr10:48246524-48248512	3	+	48246524	48246524	8553170	2	1374,437,	0,1551,
#Partially deleted in new
chr10	48248542	48251611	chr10:48248542-48251611	0	-	48248542	48248542	8553170	2	636,46,	0,3023,
#Deleted in new
chr10	48292698	48293417	chr10:48292698-48293417	7	+	48292698	48292698	16724991	1	719,	0,
#Partially deleted in new
chr10	48306638	48439357	chr10:48306638-48439357	1	+	48401660	48435029	0	12	183,171,130,59,139,166,72,183,125,64,78,4474,	0,94973,98213,103240,103391,113516,117875,119249,119741,120441,124554,128245,
#Partially deleted in new
chr10	48306654	48410146	chr10:48306654-48410146	0	+	48401660	48410146	789624	7	167,194,69,171,130,59,117,	0,1440,19242,94957,98197,103224,103375,
#Partially deleted in new
chr10	48306679	48420246	chr10:48306679-48420246	0	+	48401660	48409879	789624	5	142,171,59,139,92,	0,94932,103199,103350,113475,
#Partially deleted in new
chr10	48306689	48439360	chr10:48306689-48439360	1	+	48401660	48435029	0	12	132,171,130,59,139,166,72,183,125,64,78,4477,	0,94922,98162,103189,103340,113465,117398,119198,119690,120390,124503,128194,
#Partially deleted in new
chr10	48306752	48439360	chr10:48306752-48439360	1	+	48401660	48434895	0	15	69,194,69,45,171,130,59,139,166,72,183,125,64,78,4482,	0,1342,19144,57859,94859,98099,103126,103277,113402,117761,119135,119627,120327,124440,128126,
#Partially deleted in new
chr10	48307025	48410144	chr10:48307025-48410144	0	+	48401660	48410144	789624	7	122,194,69,171,130,59,115,	0,1069,18871,94586,97826,102853,103004,
#Partially deleted in new
chr10	48308215	48410328	chr10:48308215-48410328	1	+	48401660	48410228	8553170	5	73,171,130,59,299,	0,93396,96636,101663,101814,
#Partially deleted in new
chr10	48401611	48439357	chr10:48401611-48439357	1	+	48401660	48434895	0	10	171,130,59,139,166,27,125,64,78,4479,	0,3240,8267,8418,18543,24432,24768,25468,29581,33267,
#Partially deleted in new
chr10	48401642	48439360	chr10:48401642-48439360	1	+	48401660	48434895	0	11	140,130,59,139,166,72,183,125,64,78,4482,	0,3209,8236,8387,18512,22445,24245,24737,25437,29550,33236,
#Partially deleted in new
chr10	48401647	48439360	chr10:48401647-48439360	3	+	48401660	48435029	0	11	135,130,59,139,166,72,183,125,64,78,4477,	0,3204,8231,8382,18507,22866,24240,24732,25432,29545,33236,
#Partially deleted in new
chr10	48401660	48425831	chr10:48401660-48425831	0	+	48401660	48401660	8553170	7	122,130,59,139,166,41,82,	0,3191,8218,8369,18494,23518,24089,
#Partially deleted in new
chr10	48424518	48434898	chr10:48424518-48434898	0	+	48424518	48424518	8553170	6	67,183,125,64,78,20,	0,1369,1861,2561,6674,10360,
#Deleted in new
chr10	48424568	48427410	chr10:48424568-48427410	0	+	48424568	48424568	8553170	4	17,183,125,331,	0,1319,1811,2511,
#Partially deleted in new
chr10	48425188	48436440	chr10:48425188-48436440	0	+	48425188	48425188	8553170	3	1955,78,1562,	0,6004,9690,
#Deleted in new
chr10	48425853	48426612	chr10:48425853-48426612	0	+	48425853	48425853	8553170	2	217,233,	0,526,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	48429892	48435877	chr10:48429892-48435877	0	+	48429892	48429892	8553170	2	1378,994,	0,4991,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	48443835	48445820	chr10:48443835-48445820	3	-	48443835	48443835	8553170	1	1985,	0,
#Partially deleted in new
chr10	48446033	48605093	chr10:48446033-48605093	3	-	48446390	48604796	789624	10	586,880,122,74,133,208,129,88,200,331,	0,4227,7270,8054,8968,13650,33602,109429,136919,158729,
#Partially deleted in new
chr10	48446035	48524236	chr10:48446035-48524236	1	-	48446390	48524104	789624	6	584,880,122,208,129,184,	0,4225,7268,13648,33600,78017,
#Partially deleted in new
chr10	48446035	48556678	chr10:48446035-48556678	1	-	48446390	48479711	789624	9	584,880,122,74,133,208,177,88,114,	0,4225,7268,8052,8966,13648,33552,109427,110529,
#Partially deleted in new
chr10	48446035	48451627	chr10:48446035-48451627	1	-	48446390	48451627	789624	2	584,1367,	0,4225,
#Partially deleted in new
chr10	48446036	48493649	chr10:48446036-48493649	1	-	48446390	48493490	789624	8	583,880,122,74,133,208,129,211,	0,4224,7267,8051,8965,13647,33599,47402,
#Partially deleted in new
chr10	48446241	48652616	chr10:48446241-48652616	1	-	48446390	48652285	789624	10	378,880,122,74,133,208,129,88,200,383,	0,4019,7062,7846,8760,13442,33394,109221,136711,205992,
#Partially deleted in new
chr10	48446339	48604952	chr10:48446339-48604952	1	-	48446390	48604796	789624	10	280,880,122,74,133,208,177,88,200,190,	0,3921,6964,7748,8662,13344,33248,109123,136613,158423,
#Partially deleted in new
chr10	48446557	48656265	chr10:48446557-48656265	0	-	48454133	48652285	789624	11	62,880,122,74,81,208,129,88,200,163,757,	0,3703,6746,7530,8496,13126,33078,108905,136395,205676,208951,
#Partially deleted in new
chr10	48453300	48479206	chr10:48453300-48479206	0	-	48453300	48453300	8553170	4	125,74,133,164,	0,787,1701,25742,
#Partially deleted in new
chr10	48453356	48605088	chr10:48453356-48605088	0	-	48453356	48453356	8553170	5	69,74,133,88,326,	0,731,1645,102106,151406,
#Partially deleted in new
chr10	48454156	48466696	chr10:48454156-48466696	0	-	48454156	48454156	8553170	4	5,133,208,121,	0,845,5527,12419,
#Deleted in new
chr10	48510524	48511589	chr10:48510524-48511589	3	-	48510524	48510524	8553170	2	415,55,	0,1010,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	48532483	48583125	chr10:48532483-48583125	0	-	48532483	48532483	8553170	3	472,88,173,	0,22979,50469,
#Deleted in new
chr10	48546471	48546713	chr10:48546471-48546713	7	-	48546471	48546471	16724991	1	242,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	48574701	48604955	chr10:48574701-48604955	0	-	48574701	48574701	8553170	3	519,200,193,	0,8251,30061,
#Partially deleted in new
chr10	48575321	48583047	chr10:48575321-48583047	0	-	48575321	48575321	8553170	2	337,95,	0,7631,
#Partially deleted in new
chr10	48582720	48652321	chr10:48582720-48652321	0	-	48582720	48582720	8553170	2	432,88,	0,69513,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	48624003	48625093	chr10:48624003-48625093	3	-	48624003	48624003	8553170	2	429,168,	0,922,
#Partially deleted in new
chr10	48664198	48672424	chr10:48664198-48672424	3	-	48664198	48664198	8553170	2	214,121,	0,8105,
#Partially deleted in new
chr10	48684875	48982956	chr10:48684875-48982956	3	+	48709732	48982575	789624	62	126,251,115,107,135,190,190,158,453,105,191,581,94,215,95,235,77,222,179,232,146,112,191,153,74,162,92,100,206,170,126,165,204,115,158,239,119,186,137,78,207,52,167,149,121,86,63,43,120,118,110,154,92,213,148,185,159,180,183,85,112,448,	0,24840,35135,36385,38557,41005,42594,44556,46234,49055,51004,58092,75471,89582,90836,91874,92543,93735,95065,101763,103654,104998,105851,111422,118410,120384,121128,122983,125654,126663,129081,132369,135358,136186,137504,141795,143902,145824,147697,182389,188615,190213,192157,205703,212578,215345,216925,256930,258454,261164,261984,272253,274846,278966,281650,284188,285255,289986,291921,293433,296491,297633,
#Partially deleted in new
chr10	48684875	48736242	chr10:48684875-48736242	1	+	48709732	48736157	789624	11	126,251,115,107,135,190,190,158,453,105,363,	0,24840,35135,36385,38557,41005,42594,44556,46234,49055,51004,
#Deleted in new
chr10	48745544	48746128	chr10:48745544-48746128	7	-	48745544	48745544	16724991	1	584,	0,
#Partially deleted in new
chr10	48802737	48824169	chr10:48802737-48824169	0	+	48802737	48802737	8553170	13	49,74,162,92,100,206,170,126,165,204,115,158,988,	0,548,2522,3266,5121,7792,8801,11219,14507,17496,18324,19642,20444,
#Deleted in new
chr10	48878021	48878649	chr10:48878021-48878649	3	+	48878021	48878021	8553170	2	105,168,	0,460,
#Partially deleted in new
chr10	48883954	48935213	chr10:48883954-48935213	3	-	48883954	48883954	8553170	3	386,136,37,	0,48531,51222,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	48909482	48914232	chr10:48909482-48914232	3	-	48910236	48914155	789624	2	776,841,	0,3909,
#Partially deleted in new
chr10	48946046	48982956	chr10:48946046-48982956	0	+	48946046	48946046	8553170	12	111,110,154,92,213,2723,159,180,183,85,112,448,	0,813,11082,13675,17795,20479,24084,28815,30750,32262,35320,36462,
#Partially deleted in new
chr10	48968983	48976959	chr10:48968983-48976959	0	+	48968983	48968983	8553170	4	265,159,180,163,	0,1147,5878,7813,
#Deleted in new
chr10	48976741	48980115	chr10:48976741-48980115	0	-	48976741	48976741	8553170	3	359,196,434,	0,2003,2940,
#Deleted in new
chr10	48978344	48982956	chr10:48978344-48982956	0	+	48978344	48982762	789624	3	49,112,267,	0,3022,4345,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	48984563	49018897	chr10:48984563-49018897	3	+	48984563	48984563	8553170	2	402,72,	0,34262,
#Deleted in new
chr10	48985511	48985587	chr10:48985511-48985587	3	-	48985511	48985511	5263520	1	76,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	49014244	49115509	chr10:49014244-49115509	1	-	49019649	49115485	789624	8	5531,62,107,34,108,69,402,79,	0,32738,34233,50458,62974,71710,93349,101186,
#Partially deleted in new
chr10	49064150	49077291	chr10:49064150-49077291	0	-	49064150	49064150	8553170	2	586,73,	0,13068,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	49102171	49115509	chr10:49102171-49115509	3	-	49103741	49115485	789624	3	1689,402,79,	0,5422,13259,
#Partially deleted in new
chr10	49121838	49151547	chr10:49121838-49151547	3	+	49121838	49121838	789624	6	438,426,115,159,119,743,	0,13817,19414,21091,23943,28966,
#Partially deleted in new
chr10	49121843	49150974	chr10:49121843-49150974	0	+	49121843	49121843	8553170	6	433,115,159,119,57,170,	0,19409,21086,23938,26763,28961,
#Partially deleted in new
chr10	49122085	49141330	chr10:49122085-49141330	0	+	49122085	49122085	8553170	3	191,205,78,	0,13791,19167,
#Partially deleted in new
chr10	49131153	49134008	chr10:49131153-49134008	3	-	49131612	49133918	789624	2	1199,202,	0,2653,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	49137494	49151150	chr10:49137494-49151150	0	+	49137494	49137494	8553170	3	216,115,346,	0,3758,13310,
#Partially deleted in new
chr10	49154724	49188400	chr10:49154724-49188400	1	-	49156190	49188318	789624	7	1535,24,79,31,141,54,107,	0,6874,10480,11041,12144,13184,33569,
#Partially deleted in new
chr10	49154727	49178401	chr10:49154727-49178401	0	-	49166737	49178293	789624	6	1182,24,31,565,54,214,	0,6871,11038,11717,13181,23460,
#Partially deleted in new
chr10	49154752	49188376	chr10:49154752-49188376	1	-	49155891	49188336	789624	7	1157,24,79,31,141,54,83,	0,6846,10452,11013,12116,13156,33541,
#Deleted in new
chr10	49155568	49166993	chr10:49155568-49166993	0	-	49155568	49155568	8553170	3	341,24,125,	0,6030,11300,
#Partially deleted in new
chr10	49155611	49188359	chr10:49155611-49188359	3	-	49155884	49188336	789624	6	298,24,31,141,54,66,	0,5987,10154,11257,12297,32682,
#Partially deleted in new
chr10	49155767	49188312	chr10:49155767-49188312	0	-	49156149	49188312	789624	5	492,24,141,54,19,	0,5831,11101,12141,32526,
#Partially deleted in new
chr10	49160347	49188391	chr10:49160347-49188391	1	-	49161568	49188336	789624	6	1275,157,31,141,54,98,	0,4857,5418,6521,7561,27946,
#Partially deleted in new
chr10	49166767	49188585	chr10:49166767-49188585	0	-	49166767	49166767	8553170	3	242,54,292,	0,1141,21526,
#Partially deleted in new
chr10	49296111	49298780	chr10:49296111-49298780	3	-	49296111	49296111	8553170	2	662,91,	0,2578,
#Partially deleted in new
chr10	49296449	49299018	chr10:49296449-49299018	0	-	49296449	49296449	8553170	2	324,210,	0,2359,
#Partially deleted in new
chr10	49299192	49327487	chr10:49299192-49327487	3	+	49322545	49326853	789624	3	41,103,5086,	0,16952,23209,
#Partially deleted in new
chr10	49299273	49316247	chr10:49299273-49316247	0	+	49299273	49299273	8553170	2	181,103,	0,16871,
#Partially deleted in new
chr10	49364180	49395451	chr10:49364180-49395451	3	-	49366115	49395440	789624	6	2201,113,179,102,98,45,	0,22297,22499,25952,26983,31226,
#Partially deleted in new
chr10	49366115	49396016	chr10:49366115-49396016	1	-	49366115	49395440	789624	7	266,113,179,102,98,115,82,	0,20362,20564,24017,25048,29291,29819,
#Partially deleted in new
chr10	49419276	49472903	chr10:49419276-49472903	3	+	49419276	49419276	8553170	2	234,201,	0,53426,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr10	49455367	49539026	chr10:49455367-49539026	3	-	49458814	49532964	0	21	3867,79,205,708,146,95,120,111,216,96,117,177,171,136,159,129,745,109,121,436,65,	0,5005,5984,14814,15607,17008,17541,18109,18659,20847,22986,27319,27978,37749,45170,50516,68665,73049,75352,77175,83594,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	49455367	49476258	chr10:49455367-49476258	0	-	49474223	49476258	789624	11	3867,79,205,708,146,95,120,111,216,170,44,	0,5005,5984,14814,15607,17008,17541,18109,18659,19959,20847,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr10	49456654	49506480	chr10:49456654-49506480	0	-	49456654	49456654	8553170	15	2580,79,205,708,146,95,120,111,216,117,177,171,222,136,5943,	0,3718,4697,13527,14320,15721,16254,16822,17372,21699,26032,26691,31503,36462,43883,
#Partially deleted in new
chr10	49458787	49502122	chr10:49458787-49502122	0	-	49458787	49458787	8553170	15	447,79,205,708,146,95,120,111,216,96,117,177,171,159,85,	0,1585,2564,11394,12187,13588,14121,14689,15239,17427,19566,23899,24558,41750,43250,
#Partially deleted in new
chr10	49460023	49470281	chr10:49460023-49470281	0	-	49460023	49460023	8553170	3	428,205,100,	0,1328,10158,
#Partially deleted in new
chr10	49483367	49505999	chr10:49483367-49505999	0	-	49483367	49483367	8553170	3	149,159,116,	0,17170,22516,
#Partially deleted in new
chr10	49483385	49502157	chr10:49483385-49502157	0	-	49483385	49483385	8553170	4	131,136,159,120,	0,9731,17152,18652,
#Partially deleted in new
chr10	49500659	49506408	chr10:49500659-49506408	0	-	49500659	49500659	8553170	2	37,525,	0,5224,
#Partially deleted in new
chr10	49515200	49539040	chr10:49515200-49539040	1	-	49515332	49532964	789624	6	1921,745,109,121,436,79,	0,8832,13216,15519,17342,23761,
#Partially deleted in new
chr10	49515200	49539538	chr10:49515200-49539538	1	-	49515332	49532964	789624	6	1921,745,109,121,436,107,	0,8832,13216,15519,17342,24231,
#Partially deleted in new
chr10	49515332	49517114	chr10:49515332-49517114	1	-	49515332	49517114	789624	1	1782,	0,
#Partially deleted in new
chr10	49524935	49530737	chr10:49524935-49530737	0	-	49524935	49524935	8553170	3	291,109,18,	0,3481,5784,
#Partially deleted in new
chr10	49530723	49539538	chr10:49530723-49539538	0	-	49530723	49532964	789624	3	117,436,107,	0,1819,8708,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	49551307	49552652	chr10:49551307-49552652	7	+	49551307	49551307	16724991	3	224,181,202,	0,526,1143,
#Partially deleted in new
chr10	49609094	49665104	chr10:49609094-49665104	1	+	49616569	49665046	0	15	105,101,192,119,54,181,178,170,101,129,123,142,63,138,328,	0,7407,10630,11400,13002,16378,18513,37410,39412,40413,42789,46000,46291,53550,55682,
#Deleted in new
chr10	49610300	49612720	chr10:49610300-49612720	3	+	49610740	49612339	789624	1	2420,	0,
#Partially deleted in new
chr10	49613107	49665104	chr10:49613107-49665104	1	+	49616569	49665046	0	16	95,172,101,192,119,54,181,178,170,101,129,123,142,63,138,328,	0,1196,3394,6617,7387,8989,12365,14500,33397,35399,36400,38776,41987,42278,49537,51669,
#Partially deleted in new
chr10	49613107	49665104	chr10:49613107-49665104	1	+	49616569	49665046	0	15	95,101,192,119,54,181,178,170,101,129,123,142,63,138,328,	0,3394,6617,7387,8989,12365,14500,33397,35399,36400,38776,41987,42278,49537,51669,
#Partially deleted in new
chr10	49613107	49625488	chr10:49613107-49625488	0	+	49613107	49613107	8553170	7	95,172,101,192,119,54,16,	0,1196,3394,6617,7387,8989,12365,
#Deleted in new
chr10	49613118	49619795	chr10:49613118-49619795	0	+	49613118	49613118	8553170	3	84,101,71,	0,3383,6606,
#Partially deleted in new
chr10	49614036	49665104	chr10:49614036-49665104	3	+	49614189	49665046	0	15	439,101,192,119,54,181,178,170,101,129,123,142,63,138,328,	0,2465,5688,6458,8060,11436,13571,32468,34470,35471,37847,41058,41349,48608,50740,
#Partially deleted in new
chr10	49614036	49665104	chr10:49614036-49665104	1	+	49616052	49665046	0	16	439,70,101,192,119,54,181,178,170,101,129,123,142,63,138,328,	0,1986,2465,5688,6458,8060,11436,13571,32468,34470,35471,37847,41058,41349,48608,50740,
#Partially deleted in new
chr10	49614036	49665104	chr10:49614036-49665104	0	+	49614189	49616075	789624	16	439,70,101,192,119,54,181,178,170,101,129,123,142,63,138,328,	0,1986,2465,5688,6458,8060,11436,13571,32468,34470,35471,37847,41058,41349,48608,50740,
#Deleted in new
chr10	49615756	49619856	chr10:49615756-49619856	0	+	49615756	49615756	8553170	3	336,101,132,	0,745,3968,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	49637528	49665076	chr10:49637528-49665076	0	+	49646530	49647171	789624	11	126,170,106,87,101,129,123,142,63,138,300,	0,8976,9568,10388,10978,11979,14355,17566,17857,25116,27248,
#Partially deleted in new
chr10	49651735	49665078	chr10:49651735-49665078	0	+	49651735	49651735	8553170	6	271,142,63,160,138,302,	0,3359,3650,9518,10909,13041,
#Partially deleted in new
chr10	49679650	49696044	chr10:49679650-49696044	1	+	49679697	49693958	789624	2	144,2271,	0,14123,
#Partially deleted in new
chr10	49679685	49695107	chr10:49679685-49695107	3	+	49679697	49694602	789624	3	109,120,570,	0,14088,14852,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	49679685	49710261	chr10:49679685-49710261	1	+	49679697	49708617	789624	3	109,120,1901,	0,14088,28675,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	49679685	49710261	chr10:49679685-49710261	1	+	49679697	49708617	789624	4	109,120,1606,255,	0,14088,28675,30321,
#Partially deleted in new
chr10	49734642	49762323	chr10:49734642-49762323	3	-	49735227	49758592	789624	23	709,155,164,73,126,72,179,128,151,129,103,153,180,129,180,91,147,155,116,103,171,205,85,	0,1380,1714,3143,3304,3548,5018,6067,8185,9351,10007,10701,11155,12107,12386,15083,16196,17184,17490,17995,22133,23746,27596,
#Partially deleted in new
chr10	49734643	49762379	chr10:49734643-49762379	1	-	49735227	49758592	789624	22	708,155,164,73,126,72,179,128,151,129,103,153,180,129,180,91,147,155,116,103,205,141,	0,1379,1713,3142,3303,3547,5017,6066,8184,9350,10006,10700,11154,12106,12385,15082,16195,17183,17489,17994,23745,27595,
#Partially deleted in new
chr10	49734643	49762379	chr10:49734643-49762379	1	-	49735227	49751948	789624	21	708,155,164,73,126,72,179,128,151,129,103,153,180,129,180,91,147,155,116,103,141,	0,1379,1713,3142,3303,3547,5017,6066,8184,9350,10006,10700,11154,12106,12385,15082,16195,17183,17489,17994,27595,
#Deleted in new
chr10	49734645	49739499	chr10:49734645-49739499	0	-	49734645	49734645	8553170	5	706,155,164,73,1553,	0,1377,1711,3140,3301,
#Deleted in new
chr10	49743570	49745357	chr10:49743570-49745357	0	-	49743570	49743570	8553170	3	552,103,14,	0,1079,1773,
#Partially deleted in new
chr10	49756589	49758576	chr10:49756589-49758576	0	-	49756589	49756589	8553170	2	357,188,	0,1799,
#Partially deleted in new
chr10	49771840	49773299	chr10:49771840-49773299	7	+	49771840	49771840	16724991	2	909,144,	0,1315,
#Deleted in new
chr10	49815095	49815562	chr10:49815095-49815562	7	+	49815095	49815095	16724991	1	467,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr10	49818278	49970203	chr10:49818278-49970203	3	-	49819339	49941725	0	19	1216,129,106,109,79,148,76,61,80,158,93,75,84,123,184,987,67,316,37,	0,1886,14524,23671,25275,39027,43309,47042,51197,61394,66924,97638,104057,104268,113821,114898,116797,123230,151888,
#Partially deleted in new
chr10	49818991	49941986	chr10:49818991-49941986	0	-	49934128	49941725	789624	17	503,129,106,109,79,148,76,61,80,158,93,75,84,123,184,987,478,	0,1173,13811,22958,24562,38314,42596,46329,50484,60681,66211,96925,103344,103555,113108,114185,122517,
#Partially deleted in new
chr10	49819144	49941998	chr10:49819144-49941998	0	-	49861646	49941725	789624	8	350,129,106,109,79,148,76,490,	0,1020,13658,22805,24409,38161,42443,122364,
#Partially deleted in new
chr10	49819333	49941985	chr10:49819333-49941985	1	-	49819339	49941725	0	18	161,129,106,109,79,148,76,61,80,158,93,75,84,123,184,987,67,477,	0,831,13469,22616,24220,37972,42254,45987,50142,60339,65869,96583,103002,103213,112766,113843,115742,122175,
#Partially deleted in new
chr10	49820209	49833274	chr10:49820209-49833274	0	-	49820209	49820209	8553170	2	84,472,	0,12593,
#Partially deleted in new
chr10	49857294	49941970	chr10:49857294-49941970	0	-	49857294	49857294	8553170	11	159,76,61,80,158,93,87,75,84,184,185,	0,4293,8026,12181,22378,27908,51160,58622,65041,74805,84491,
#Deleted in new
chr10	49865320	49867434	chr10:49865320-49867434	0	-	49865320	49865320	8553170	2	61,363,	0,1751,
#Deleted in new
chr10	49909612	49909942	chr10:49909612-49909942	7	+	49909612	49909612	16724991	1	330,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	49942032	49973477	chr10:49942032-49973477	3	+	49942194	49973064	789624	7	268,59,94,85,59,111,466,	0,2999,10093,10416,12969,16337,30979,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	49942048	49974850	chr10:49942048-49974850	0	+	49942194	49952136	789624	8	252,124,59,94,85,59,111,1839,	0,1186,2983,10077,10400,12953,16321,30963,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	49942080	49973679	chr10:49942080-49973679	1	+	49942194	49973064	789624	5	220,59,94,111,668,	0,2951,10045,16289,30931,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	49942080	49973181	chr10:49942080-49973181	0	+	49942194	49952136	789624	7	220,94,85,59,111,417,170,	0,10045,10368,12921,16289,27961,30931,
#Deleted in new
chr10	49954213	49954414	chr10:49954213-49954414	3	+	49954213	49954213	5263520	1	201,	0,
#Partially deleted in new
chr10	49972762	49981370	chr10:49972762-49981370	0	+	49972762	49972762	8553170	2	380,182,	0,8426,
#Partially deleted in new
chr10	49972834	49982053	chr10:49972834-49982053	3	+	49972834	49972834	8553170	3	308,93,149,	0,8354,9070,
#Deleted in new
chr10	49979664	49979780	chr10:49979664-49979780	7	-	49979664	49979664	16724991	1	116,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	49981419	49988899	chr10:49981419-49988899	3	-	49981419	49981419	8553170	4	312,486,187,167,	0,560,3342,7313,
#Partially deleted in new
chr10	49982189	50010497	chr10:49982189-50010497	1	+	49991741	50010186	789624	10	223,70,95,188,69,69,101,36,52,1787,	0,4975,5931,6561,7118,9486,19806,22495,25835,26521,
#Partially deleted in new
chr10	49988317	50010499	chr10:49988317-50010499	1	+	49988715	50010186	789624	7	621,69,35,101,36,52,1789,	0,3358,6077,13678,16367,19707,20393,
#Partially deleted in new
chr10	49988643	50010425	chr10:49988643-50010425	3	+	49988715	50010186	789624	8	295,69,69,35,101,36,52,1715,	0,664,3032,5751,13352,16041,19381,20067,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	50021181	50067803	chr10:50021181-50067803	7	-	50021181	50021181	16724991	7	286,132,102,87,173,119,1278,	0,27020,29350,33456,37919,40296,45344,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	50021400	50061579	chr10:50021400-50061579	4	-	50021400	50021400	16724991	9	67,132,102,87,128,173,60,58,102,	0,26801,29131,33237,35383,37700,38264,39546,40077,
#Deleted in new
chr10	50025134	50027363	chr10:50025134-50027363	7	-	50025134	50025134	16724991	1	2229,	0,
#Partially deleted in new
chr10	50048201	50063376	chr10:50048201-50063376	5	-	50048201	50048201	16724991	10	132,102,87,128,173,60,58,119,69,57,	0,2330,6436,8582,10899,11463,12745,13276,14434,15118,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr10	50067887	50133506	chr10:50067887-50133506	1	+	50068005	50132945	789624	28	121,123,165,63,174,94,62,48,111,88,119,58,60,180,128,87,102,132,170,103,183,129,81,123,213,621,178,701,	0,217,1659,10787,12870,16184,17609,19387,22888,23543,25380,25972,27260,27711,29787,32090,36154,38446,42213,46007,51699,57225,57481,58169,59695,61531,63013,64918,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr10	50067906	50133506	chr10:50067906-50133506	1	+	50068005	50132945	789624	30	102,123,165,63,174,94,62,48,111,88,72,119,58,60,180,128,87,102,132,170,103,153,183,129,81,123,213,621,178,701,	0,198,1640,10768,12851,16165,17590,19368,22869,23524,24255,25361,25953,27241,27692,29768,32071,36135,38427,42194,45988,49999,51680,57206,57462,58150,59676,61512,62994,64899,
#Partially deleted in new
chr10	50067922	50133349	chr10:50067922-50133349	1	+	50068005	50132945	789624	29	86,123,165,63,174,94,62,48,111,88,72,119,58,60,180,128,87,102,132,170,103,153,183,129,81,213,621,178,544,	0,182,1624,10752,12835,16149,17574,19352,22853,23508,24239,25345,25937,27225,27676,29752,32055,36119,38411,42178,45972,49983,51664,57190,57446,59660,61496,62978,64883,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr10	50067923	50133502	chr10:50067923-50133502	0	+	50068005	50085508	789624	28	85,123,165,18,62,48,111,88,72,119,58,60,180,128,87,102,132,170,103,153,183,129,81,123,63,213,366,65,	0,181,1623,10751,17573,19351,22852,23507,24238,25344,25936,27224,27675,29751,32054,36118,38410,42177,45971,49982,51663,57189,57445,58133,59236,59659,61495,65514,
#Partially deleted in new
chr10	50067960	50133146	chr10:50067960-50133146	3	+	50068005	50132945	789624	31	48,123,165,63,174,94,62,48,111,88,72,119,58,60,180,128,87,102,132,170,103,153,183,129,81,123,63,213,621,178,341,	0,144,1586,10714,12797,16111,17536,19314,22815,23470,24201,25307,25899,27187,27638,29714,32017,36081,38373,42140,45934,49945,51626,57152,57408,58096,59199,59622,61458,62940,64845,
#Partially deleted in new
chr10	50069509	50091505	chr10:50069509-50091505	0	+	50069509	50069509	8553170	7	202,63,174,62,48,111,75,	0,9165,11248,15987,17765,21266,21921,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr10	50078125	50133506	chr10:50078125-50133506	1	+	50078125	50132945	789624	29	27,63,174,94,62,48,111,88,72,119,58,60,180,128,87,102,132,170,103,153,183,129,81,123,63,213,621,178,701,	0,549,2632,5946,7371,9149,12650,13305,14036,15142,15734,17022,17473,19549,21852,25916,28208,31975,35769,39780,41461,46987,47243,47931,49034,49457,51293,52775,54680,
#Partially deleted in new
chr10	50080875	50085619	chr10:50080875-50085619	0	+	50080875	50080875	8553170	3	56,94,123,	0,3196,4621,
#Partially deleted in new
chr10	50119649	50126508	chr10:50119649-50126508	0	+	50119649	50126197	789624	4	120,129,81,452,	0,5463,5719,6407,
#Deleted in new
chr10	50150602	50152287	chr10:50150602-50152287	7	+	50150602	50150602	16724991	1	1685,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr10	50182777	50248610	chr10:50182777-50248610	3	-	50187314	50248610	0	20	4727,89,60,147,96,96,40,95,116,82,105,87,126,121,78,128,177,150,233,127,	0,6721,9875,13995,16273,20051,20862,22083,23204,28045,28252,30194,31965,35732,50406,51647,53110,60424,62444,65706,
#Partially deleted in new
chr10	50187210	50199146	chr10:50187210-50199146	0	-	50187314	50199146	789624	4	294,89,60,96,	0,2288,5442,11840,
#Partially deleted in new
chr10	50187241	50240547	chr10:50187241-50240547	1	-	50187314	50240547	789624	18	263,89,60,147,96,96,40,95,116,82,105,87,126,121,78,128,177,36,	0,2257,5411,9531,11809,15587,16398,17619,18740,23581,23788,25730,27501,31268,45942,47183,48646,53270,
#Partially deleted in new
chr10	50187241	50248610	chr10:50187241-50248610	1	-	50187314	50248610	0	19	263,89,60,147,96,96,40,95,116,82,87,126,121,78,128,177,150,233,127,	0,2257,5411,9531,11809,15587,16398,17619,18740,23581,25730,27501,31268,45942,47183,48646,55960,57980,61242,
#Partially deleted in new
chr10	50187311	50248553	chr10:50187311-50248553	1	-	50187314	50248553	789624	19	193,89,60,147,96,96,40,95,116,82,87,126,121,78,128,177,150,233,70,	0,2187,5341,9461,11739,15517,16328,17549,18670,23511,25660,27431,31198,45872,47113,48576,55890,57910,61172,
#Partially deleted in new
chr10	50187410	50199146	chr10:50187410-50199146	0	-	50198309	50199146	789624	6	94,89,60,147,69,96,	0,2088,5242,9362,10890,11640,
#Partially deleted in new
chr10	50264977	50266815	chr10:50264977-50266815	7	+	50264977	50264977	16724991	1	1838,	0,
#Partially deleted in new
chr10	50305585	50623977	chr10:50305585-50623977	1	-	50311378	50344114	789624	10	1736,167,154,854,81,142,43,91,95,271,	0,2396,5676,37906,127890,155087,161304,214245,284567,318121,
#Partially deleted in new
chr10	50305599	50623983	chr10:50305599-50623983	3	-	50307141	50344114	789624	11	1722,167,154,118,854,81,142,43,91,95,277,	0,2382,5662,21605,37892,127876,155073,161290,214231,284553,318107,
#Partially deleted in new
chr10	50311362	50340676	chr10:50311362-50340676	0	-	50311362	50327258	789624	3	53,118,290,	0,15842,29024,
#Partially deleted in new
chr10	50327277	50344246	chr10:50327277-50344246	1	-	50341331	50344114	789624	4	45,78,218,755,	0,13109,13939,16214,
#Partially deleted in new
chr10	50327277	50344246	chr10:50327277-50344246	0	-	50341331	50344114	789624	4	45,78,135,755,	0,13109,14022,16214,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	50334537	50336123	chr10:50334537-50336123	3	+	50334537	50334537	8553170	1	1586,	0,
#Partially deleted in new
chr10	50341331	50623977	chr10:50341331-50623977	1	-	50341331	50344114	789624	8	103,854,81,142,43,91,95,271,	0,2160,92144,119341,125558,178499,248821,282375,
#Deleted in new
chr10	50342193	50343526	chr10:50342193-50343526	0	-	50343487	50343526	789624	1	1333,	0,
#Partially deleted in new
chr10	50344135	50418478	chr10:50344135-50418478	0	-	50344135	50344135	8553170	2	210,415,	0,73928,
#Partially deleted in new
chr10	50344270	50624986	chr10:50344270-50624986	0	-	50344270	50344270	8553170	7	75,81,142,43,91,95,67,	0,89205,116402,122619,175560,245882,280649,
#Partially deleted in new
chr10	50459940	50466932	chr10:50459940-50466932	0	-	50459940	50459940	8553170	3	212,142,43,	0,732,6949,
#Partially deleted in new
chr10	50460672	50625163	chr10:50460672-50625163	0	-	50460672	50460672	8553170	5	142,43,91,95,171,	0,6217,59158,129480,164320,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	50472813	50474246	chr10:50472813-50474246	3	+	50472813	50472813	8553170	2	83,290,	0,1143,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	50590651	50590712	chr10:50590651-50590712	3	-	50590651	50590651	8553170	1	61,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	50624950	50641451	chr10:50624950-50641451	3	+	50624950	50624950	789624	4	241,136,148,11875,	0,1719,4080,4626,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	50624962	50629972	chr10:50624962-50629972	0	+	50624962	50624962	8553170	4	229,156,148,396,	0,1687,4068,4614,
#Deleted in new
chr10	50629531	50631075	chr10:50629531-50631075	7	-	50629531	50629531	16724991	1	1544,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	50655966	50660268	chr10:50655966-50660268	7	+	50655966	50655966	16724991	2	170,2592,	0,1710,
#Deleted in new
chr10	50658528	50660472	chr10:50658528-50660472	5	+	50658528	50658528	16724991	1	1944,	0,
#Partially deleted in new
chr10	50676742	50686326	chr10:50676742-50686326	7	+	50676742	50676742	16724991	8	382,699,129,137,381,148,406,216,	0,2430,5085,6186,6768,7604,8085,9368,
#Deleted in new
chr10	50695591	50695981	chr10:50695591-50695981	7	+	50695591	50695591	16724991	1	390,	0,
#Partially deleted in new
chr10	50705379	50708906	chr10:50705379-50708906	7	-	50705379	50705379	16724991	7	100,118,163,225,147,123,126,	0,614,1324,1967,2410,2659,3401,
#Deleted in new
chr10	50726946	50727969	chr10:50726946-50727969	7	-	50726946	50726946	16724991	1	1023,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	50739317	50757188	chr10:50739317-50757188	1	+	50745130	50754740	789624	6	685,96,147,60,89,2638,	0,3597,5810,10025,13150,15233,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	50739584	50759241	chr10:50739584-50759241	3	+	50745130	50754740	789624	6	399,96,147,60,89,4691,	0,3330,5543,9758,12883,14966,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	50739921	50759240	chr10:50739921-50759240	0	+	50742924	50745137	789624	7	62,96,36,147,60,89,4690,	0,2993,4775,5206,9421,12546,14629,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	50739935	50759240	chr10:50739935-50759240	0	+	50742924	50743718	789624	7	48,96,69,147,60,89,4690,	0,2979,3737,5192,9407,12532,14615,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	50739935	50759189	chr10:50739935-50759189	1	+	50742924	50754740	789624	6	48,96,73,60,89,4639,	0,2979,5266,9407,12532,14615,
#Partially deleted in new
chr10	50739947	50754809	chr10:50739947-50754809	1	+	50742924	50754740	789624	6	55,96,73,60,89,259,	0,2967,5254,9395,12520,14603,
#Partially deleted in new
chr10	50739951	50816495	chr10:50739951-50816495	0	+	50739951	50739951	8553170	7	32,96,60,89,239,109,246,	0,2963,9391,12516,66141,76063,76298,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	50799408	50885675	chr10:50799408-50885675	1	-	50806728	50859940	0	12	7472,149,137,182,274,98,165,239,131,135,144,95,	0,10485,11631,14448,16597,21143,28722,36665,42453,44579,60433,86172,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	50799420	50885675	chr10:50799420-50885675	1	-	50806728	50859940	0	14	7460,149,137,182,274,98,165,239,131,135,144,93,48,95,	0,10473,11619,14436,16585,21131,28710,36653,42441,44567,60421,63468,64612,86160,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr10	50799420	50885675	chr10:50799420-50885675	1	-	50806728	50850787	789624	15	7460,149,137,206,274,98,165,239,131,135,143,144,93,48,95,	0,10473,11619,14436,16585,21131,28710,36653,42441,44567,51244,60421,63468,64612,86160,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	50799420	50885675	chr10:50799420-50885675	1	-	50806728	50850787	0	14	7460,149,137,182,274,98,165,239,131,135,143,144,48,95,	0,10473,11619,14436,16585,21131,28710,36653,42441,44567,51244,60421,64612,86160,
#Partially deleted in new
chr10	50806561	50859985	chr10:50806561-50859985	3	-	50806728	50859940	0	11	319,149,137,206,274,98,165,239,131,135,144,	0,3332,4478,7295,9444,13990,21569,29512,35300,37426,53280,
#Partially deleted in new
chr10	50806561	50885675	chr10:50806561-50885675	1	-	50806728	50850787	0	13	319,149,137,182,274,98,165,239,131,135,143,144,95,	0,3332,4478,7295,9444,13990,21569,29512,35300,37426,44103,53280,79019,
#Partially deleted in new
chr10	50806561	50885675	chr10:50806561-50885675	1	-	50806728	50859940	0	13	319,149,137,182,274,98,165,239,131,135,144,48,95,	0,3332,4478,7295,9444,13990,21569,29512,35300,37426,53280,57471,79019,
#Partially deleted in new
chr10	50811043	50828461	chr10:50811043-50828461	0	-	50811043	50811043	8553170	6	133,182,274,98,165,74,	0,2813,4962,9508,17087,17344,
#Deleted in new
chr10	50822691	50824525	chr10:50822691-50824525	3	-	50822691	50822691	8553170	4	293,103,185,55,	0,801,1286,1779,
#Partially deleted in new
chr10	50828130	50885675	chr10:50828130-50885675	0	-	50828130	50828130	8553170	6	165,239,131,135,48,95,	0,7943,13731,15857,35902,57450,
#Partially deleted in new
chr10	50836073	50885675	chr10:50836073-50885675	0	-	50836073	50859940	789624	7	239,131,135,144,93,48,95,	0,5788,7914,23768,26815,27959,49507,
#Deleted in new
chr10	50962992	50963358	chr10:50962992-50963358	7	-	50962992	50962992	16724991	1	366,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	50964269	50965220	chr10:50964269-50965220	3	+	50964269	50964269	8553170	1	951,	0,
#Partially deleted in new
chr10	50990890	52298350	chr10:50990890-52298350	3	+	50991378	52293900	0	18	754,167,114,106,64,78,95,66,75,97,140,90,142,164,123,63,67,4549,	0,162273,476832,813694,916616,1063593,1071646,1142949,1170998,1260679,1280459,1281501,1289898,1291262,1297835,1298040,1299333,1302911,
#Partially deleted in new
chr10	50991093	52298350	chr10:50991093-52298350	1	+	50991378	52293900	0	18	551,167,114,106,64,78,95,66,75,97,140,90,142,164,123,63,67,4549,	0,162070,476629,813491,916413,1063390,1071443,1142746,1170795,1260476,1280256,1281298,1289695,1291059,1297632,1297837,1299130,1302708,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	51062578	51068553	chr10:51062578-51068553	3	-	51062578	51062578	789624	2	352,69,	0,5906,
#Partially deleted in new
chr10	51074303	52062862	chr10:51074303-52062862	1	+	51074590	52062824	789624	8	598,167,114,106,64,78,95,75,	0,78860,393419,730281,833203,980180,988233,988484,
#Partially deleted in new
chr10	51074473	52298350	chr10:51074473-52298350	1	+	51074590	52293900	0	18	428,167,114,106,64,78,95,66,75,97,140,90,142,164,123,63,67,4549,	0,78690,393249,730111,833033,980010,988063,1059366,1087415,1177096,1196876,1197918,1206315,1207679,1214252,1214457,1215750,1219328,
#Partially deleted in new
chr10	51074473	52295514	chr10:51074473-52295514	1	+	51074590	52293900	0	18	428,167,114,106,64,78,95,66,75,97,140,90,142,164,123,63,67,1713,	0,78690,393249,730111,833033,980010,988063,1059366,1087415,1177096,1196876,1197918,1206315,1207679,1214252,1214457,1215750,1219328,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	51074509	51911205	chr10:51074509-51911205	1	+	51074590	51907591	789624	5	392,167,114,106,3699,	0,78654,393213,730075,832997,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	51074509	51909460	chr10:51074509-51909460	1	+	51074590	51908856	789624	6	392,167,114,106,64,706,	0,78654,393213,730075,832997,834245,
#Partially deleted in new
chr10	51074569	52062856	chr10:51074569-52062856	1	+	51074590	52062635	789624	7	332,167,114,106,64,78,320,	0,78594,393153,730015,832937,979914,987967,
#Partially deleted in new
chr10	51244893	51245806	chr10:51244893-51245806	3	-	51244893	51244893	8553170	3	242,118,86,	0,595,827,
#Partially deleted in new
chr10	51299572	51299655	chr10:51299572-51299655	3	+	51299572	51299572	5263520	1	83,	0,
#Partially deleted in new
chr10	51302565	51306709	chr10:51302565-51306709	3	+	51302565	51302565	8553170	2	259,141,	0,4003,
#Partially deleted in new
chr10	51319825	51320660	chr10:51319825-51320660	7	+	51319825	51319825	16724991	1	835,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	51467722	51568789	chr10:51467722-51568789	0	+	51467722	51467722	8553170	2	114,364,	0,100703,
#Deleted in new
chr10	51695486	51699591	chr10:51695486-51699591	3	-	51697698	51699549	789624	1	4105,	0,
#Partially deleted in new
chr10	52046866	52294176	chr10:52046866-52294176	0	+	52046866	52046866	8553170	15	60,78,95,61,66,75,97,140,90,142,164,123,63,67,375,	0,7617,15670,34730,86973,115022,204703,224483,225525,233922,235286,241859,242064,243357,246935,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	52230741	52301302	chr10:52230741-52301302	3	-	52230741	52230741	8553170	4	656,135,53,42,	0,11365,63173,70519,
#Partially deleted in new
chr10	52251964	52297915	chr10:52251964-52297915	0	-	52251964	52251964	8553170	4	872,70,53,116,	0,1406,41950,45835,
#Partially deleted in new
chr10	52252058	52314507	chr10:52252058-52314507	1	-	52252058	52252058	8553170	8	778,70,53,140,74,138,88,874,	0,1312,41856,49202,52170,57341,61339,61575,
#Partially deleted in new
chr10	52300802	52314128	chr10:52300802-52314128	0	-	52300802	52300802	8553170	6	36,140,74,138,88,495,	0,458,3426,8597,12595,12831,
#Deleted in new
chr10	52314295	52317657	chr10:52314295-52317657	3	+	52314434	52316807	0	4	382,163,141,1104,	0,627,1999,2258,
#Deleted in new
chr10	52314679	52316435	chr10:52314679-52316435	0	+	52314679	52314679	8553170	2	406,141,	0,1615,
#Deleted in new
chr10	52315056	52318042	chr10:52315056-52318042	0	+	52315056	52315056	8553170	4	29,141,177,118,	0,1238,1497,2868,
#Deleted in new
chr10	52315251	52316901	chr10:52315251-52316901	0	+	52315251	52315251	8553170	3	55,141,348,	0,1043,1302,
#Deleted in new
chr10	52389111	52389488	chr10:52389111-52389488	7	-	52389111	52389111	16724991	1	377,	0,
#Partially deleted in new
chr10	52411134	52413492	chr10:52411134-52413492	7	+	52411134	52411134	16724991	2	210,2056,	0,302,
#Partially deleted in new
chr10	52450873	52455272	chr10:52450873-52455272	1	-	52450873	52450873	789624	3	644,164,167,	0,3712,4232,
#Partially deleted in new
chr10	52451313	52470533	chr10:52451313-52470533	1	-	52451313	52451313	789624	4	204,164,65,137,	0,3272,11954,19083,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	52451316	52755404	chr10:52451316-52755404	3	-	52451316	52451316	8553170	7	201,164,65,27,110,149,99,	0,3269,11951,105208,109689,272553,303989,
#Partially deleted in new
chr10	52556701	52561105	chr10:52556701-52561105	1	-	52556701	52556701	8553170	2	440,100,	0,4304,
#Partially deleted in new
chr10	52556982	52755409	chr10:52556982-52755409	0	-	52556982	52556982	789624	3	159,110,100,	0,4023,198327,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	52765379	52771700	chr10:52765379-52771700	3	-	52768136	52771635	0	4	3131,69,117,252,	0,3867,5290,6069,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	52852606	52852703	chr10:52852606-52852703	3	+	52852606	52852606	8553170	1	97,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	52946430	52955585	chr10:52946430-52955585	3	-	52946430	52946430	8553170	2	6540,204,	0,8951,
#Deleted in new
chr10	53038284	53038544	chr10:53038284-53038544	7	+	53038284	53038284	16724991	1	260,	0,
#Partially deleted in new
chr10	53291071	53311065	chr10:53291071-53311065	3	-	53291071	53291071	8553170	2	523,74,	0,19920,
#Deleted in new
chr10	53458196	53458288	chr10:53458196-53458288	7	+	53458196	53458196	16724991	1	92,	0,
#Partially deleted in new
chr10	53766399	53766614	chr10:53766399-53766614	7	+	53766399	53766399	16724991	1	215,	0,
#Partially deleted in new
chr10	53802770	54801291	chr10:53802770-54801291	1	-	53806578	54664262	789624	35	4360,109,6,156,9,219,177,89,216,128,141,110,113,141,117,225,306,129,94,80,133,194,150,135,207,113,109,171,111,120,156,161,66,119,367,	0,7785,22365,24622,25794,28544,37549,54404,63871,100472,136044,138095,156961,158981,192878,217421,220121,263986,276560,287213,330104,350329,380673,382363,392912,411165,434052,514500,526825,543594,566349,576011,725041,861401,998154,
#Partially deleted in new
chr10	53802770	54801291	chr10:53802770-54801291	1	-	53806578	54664262	789624	34	4360,109,157,10,220,177,89,216,128,141,110,113,141,117,225,306,129,94,80,133,194,150,135,207,113,109,171,111,120,156,161,66,119,367,	0,7785,24622,28530,28543,37549,54404,63871,100472,136044,138095,156961,158981,192878,217421,220121,263986,276560,287213,330104,350329,380673,382363,392912,411165,434052,514500,526825,543594,566349,576011,725041,861401,998154,
#Partially deleted in new
chr10	53802770	54801291	chr10:53802770-54801291	1	-	53806578	54664262	789624	35	4360,109,157,10,220,177,89,216,128,141,110,113,141,117,225,306,129,94,80,133,194,150,135,207,113,109,171,111,120,156,161,66,15,119,367,	0,7785,24622,28530,28543,37549,54404,63871,100472,136044,138095,156961,158981,192878,217421,220121,263986,276560,287213,330104,350329,380673,382363,392912,411165,434052,514500,526825,543594,566349,576011,725041,725617,861401,998154,
#Partially deleted in new
chr10	53802770	54801291	chr10:53802770-54801291	1	-	53806578	54664262	789624	38	4360,109,71,39,19,66,156,9,219,177,89,216,128,141,110,113,141,117,225,306,129,94,80,133,194,150,135,207,113,109,171,111,120,156,161,66,119,367,	0,7785,8778,13468,15224,17394,24622,25794,28544,37549,54404,63871,100472,136044,138095,156961,158981,192878,217421,220121,263986,276560,287213,330104,350329,380673,382363,392912,411165,434052,514500,526825,543594,566349,576011,725041,861401,998154,
#Partially deleted in new
chr10	53806155	54801291	chr10:53806155-54801291	1	-	53806578	54664262	0	34	975,109,156,9,219,177,89,216,128,141,110,113,141,117,225,306,129,94,80,133,194,150,135,207,113,109,171,111,120,156,161,66,119,367,	0,4400,21237,22409,25159,34164,51019,60486,97087,132659,134710,153576,155596,189493,214036,216736,260601,273175,283828,326719,346944,377288,378978,389527,407780,430667,511115,523440,540209,562964,572626,721656,858016,994769,
#Partially deleted in new
chr10	53806322	54801291	chr10:53806322-54801291	1	-	53806578	54664262	789624	36	808,109,6,156,9,219,177,89,216,128,141,110,113,141,117,225,306,129,94,80,133,194,150,135,207,113,109,171,111,120,156,161,66,15,119,367,	0,4233,18813,21070,22242,24992,33997,50852,60319,96920,132492,134543,153409,155429,189326,213869,216569,260434,273008,283661,326552,346777,377121,378811,389360,407613,430500,510948,523273,540042,562797,572459,721489,722065,857849,994602,
#Partially deleted in new
chr10	53806324	54801291	chr10:53806324-54801291	1	-	53806578	53857239	789624	9	806,109,71,39,19,219,177,89,367,	0,4231,5224,9914,11670,24990,33995,50850,994600,
#Partially deleted in new
chr10	53806325	54195846	chr10:53806325-54195846	0	-	53806578	54195846	789624	28	805,109,71,39,19,66,156,9,219,177,89,216,128,141,110,113,141,117,225,306,129,94,80,133,194,150,135,164,	0,4230,5223,9913,11669,13839,21067,22239,24989,33994,50849,60316,96917,132489,134540,153406,155426,189323,213866,216566,260431,273005,283658,326549,346774,377118,378808,389357,
#Partially deleted in new
chr10	53806500	53857206	chr10:53806500-53857206	0	-	53806578	53857206	789624	10	630,109,71,39,19,156,9,219,177,32,	0,4055,5048,9738,11494,20892,22064,24814,33819,50674,
#Partially deleted in new
chr10	53806985	53818384	chr10:53806985-53818384	0	-	53806985	53806985	8553170	5	145,109,71,39,390,	0,3570,4563,9253,11009,
#Partially deleted in new
chr10	53808069	54801291	chr10:53808069-54801291	1	-	53808691	54664262	789624	12	1477,207,113,109,171,111,120,156,161,66,119,367,	0,387613,405866,428753,509201,521526,538295,561050,570712,719742,856102,992855,
#Partially deleted in new
chr10	53808069	54801291	chr10:53808069-54801291	1	-	53808691	54664262	789624	11	1477,113,109,171,111,120,156,161,66,119,367,	0,405866,428753,509201,521526,538295,561050,570712,719742,856102,992855,
#Partially deleted in new
chr10	53808069	54801291	chr10:53808069-54801291	1	-	53809479	54664262	789624	36	1477,109,71,6,156,9,219,177,89,216,128,141,110,113,141,117,225,306,129,94,80,133,194,150,135,207,113,109,171,111,120,156,161,66,119,367,	0,2486,3479,17066,19323,20495,23245,32250,49105,58572,95173,130745,132796,151662,153682,187579,212122,214822,258687,271261,281914,324805,345030,375374,377064,387613,405866,428753,509201,521526,538295,561050,570712,719742,856102,992855,
#Partially deleted in new
chr10	53808084	54801291	chr10:53808084-54801291	1	-	53808691	54664262	789624	18	1462,94,80,133,194,150,135,207,113,109,171,111,120,156,161,66,119,367,	0,271246,281899,324790,345015,375359,377049,387598,405851,428738,509186,521511,538280,561035,570697,719727,856087,992840,
#Partially deleted in new
chr10	53808107	54801291	chr10:53808107-54801291	1	-	53809479	54195799	789624	29	1439,109,71,6,156,9,219,177,89,216,128,141,110,113,141,117,225,306,129,94,80,133,194,150,135,21,207,119,367,	0,2448,3441,17028,19285,20457,23207,32212,49067,58534,95135,130707,132758,151624,153644,187541,212084,214784,258649,271223,281876,324767,344992,375336,377026,381256,387575,856064,992817,
#Partially deleted in new
chr10	53808130	54801291	chr10:53808130-54801291	0	-	53840382	54664262	789624	14	1416,109,156,9,219,177,171,111,120,156,161,66,119,367,	0,2425,19262,20434,23184,32189,509140,521465,538234,560989,570651,719681,856041,992794,
#Partially deleted in new
chr10	53808130	54801291	chr10:53808130-54801291	1	-	53808691	54664262	789624	37	1416,109,6,156,9,219,177,89,216,128,141,110,113,141,117,225,306,129,94,80,133,194,150,135,21,207,113,109,171,111,120,156,161,66,15,119,367,	0,2425,17005,19262,20434,23184,32189,49044,58511,95112,130684,132735,151601,153621,187518,212061,214761,258626,271200,281853,324744,344969,375313,377003,381233,387552,405805,428692,509140,521465,538234,560989,570651,719681,720257,856041,992794,
#Partially deleted in new
chr10	53808521	54801291	chr10:53808521-54801291	1	-	53808691	54664262	0	35	1025,109,156,9,219,177,89,216,128,141,110,113,141,117,225,306,129,94,80,133,194,150,135,21,207,113,109,171,111,120,156,161,66,119,367,	0,2034,18871,20043,22793,31798,48653,58120,94721,130293,132344,151210,153230,187127,211670,214370,258235,270809,281462,324353,344578,374922,376612,380842,387161,405414,428301,508749,521074,537843,560598,570260,719290,855650,992403,
#Deleted in new
chr10	53808521	53810664	chr10:53808521-53810664	0	-	53810551	53810664	789624	2	1025,118,	0,2025,
#Partially deleted in new
chr10	53808691	54801291	chr10:53808691-54801291	1	-	53809479	54664262	789624	35	855,109,76,158,10,220,177,89,216,128,141,110,113,141,117,225,306,129,94,80,133,194,150,135,207,113,109,171,111,120,156,161,66,119,367,	0,1864,2857,18700,22609,22622,31628,48483,57950,94551,130123,132174,151040,153060,186957,211500,214200,258065,270639,281292,324183,344408,374752,376442,386991,405244,428131,508579,520904,537673,560428,570090,719120,855480,992233,
#Partially deleted in new
chr10	53808691	54801291	chr10:53808691-54801291	1	-	53808691	54664262	789624	36	855,109,157,10,220,177,89,216,128,141,110,113,141,117,225,306,129,94,80,133,194,150,135,21,207,113,109,171,111,120,156,161,66,15,119,367,	0,1864,18701,22609,22622,31628,48483,57950,94551,130123,132174,151040,153060,186957,211500,214200,258065,270639,281292,324183,344408,374752,376442,380672,386991,405244,428131,508579,520904,537673,560428,570090,719120,719696,855480,992233,
#Partially deleted in new
chr10	53821099	54801291	chr10:53821099-54801291	1	-	53821857	54664262	789624	31	2259,156,219,177,89,216,128,141,110,113,141,117,225,306,129,94,80,133,194,150,135,207,113,109,171,120,156,161,66,119,367,	0,6293,10215,19220,36075,45542,82143,117715,119766,138632,140652,174549,199092,201792,245657,258231,268884,311775,332000,362344,364034,374583,392836,415723,496171,525265,548020,557682,706712,843072,979825,
#Partially deleted in new
chr10	53821099	54801291	chr10:53821099-54801291	1	-	53821857	54664262	789624	34	2268,157,10,220,177,89,216,128,141,110,113,141,117,225,306,129,94,80,133,194,150,135,207,113,109,171,111,120,156,161,66,15,119,367,	0,6293,10201,10214,19220,36075,45542,82143,117715,119766,138632,140652,174549,199092,201792,245657,258231,268884,311775,332000,362344,364034,374583,392836,415723,496171,508496,525265,548020,557682,706712,707288,843072,979825,
#Partially deleted in new
chr10	53821099	54801291	chr10:53821099-54801291	1	-	53821857	54664262	789624	31	2268,157,10,220,177,89,216,128,141,110,113,141,117,225,306,129,94,194,150,135,207,113,109,171,111,120,156,161,66,119,367,	0,6293,10201,10214,19220,36075,45542,82143,117715,119766,138632,140652,174549,199092,201792,245657,258231,332000,362344,364034,374583,392836,415723,496171,508496,525265,548020,557682,706712,843072,979825,
#Partially deleted in new
chr10	53821109	54801291	chr10:53821109-54801291	1	-	53821857	54664262	789624	34	2249,6,156,9,219,177,89,216,128,141,110,113,141,117,225,306,129,94,80,133,194,150,135,207,113,109,171,111,120,156,161,66,119,367,	0,4026,6283,7455,10205,19210,36065,45532,82133,117705,119756,138622,140642,174539,199082,201782,245647,258221,268874,311765,331990,362334,364024,374573,392826,415713,496161,508486,525255,548010,557672,706702,843062,979815,
#Partially deleted in new
chr10	53821109	54801291	chr10:53821109-54801291	0	-	54079376	54664262	789624	32	2249,156,9,219,177,89,216,128,141,110,113,141,117,225,306,129,94,133,194,150,135,207,113,109,171,111,120,156,161,66,119,367,	0,6283,7455,10205,19210,36065,45532,82133,117705,119756,138622,140642,174539,199082,201782,245647,258221,311765,331990,362334,364024,374573,392826,415713,496161,508486,525255,548010,557672,706702,843062,979815,
#Partially deleted in new
chr10	53821109	54801291	chr10:53821109-54801291	1	-	53821857	54664262	789624	35	2249,6,156,9,219,177,89,216,128,141,110,113,141,117,225,306,129,94,80,133,194,150,135,207,113,109,171,111,120,156,161,66,15,119,367,	0,4026,6283,7455,10205,19210,36065,45532,82133,117705,119756,138622,140642,174539,199082,201782,245647,258221,268874,311765,331990,362334,364024,374573,392826,415713,496161,508486,525255,548010,557672,706702,707278,843062,979815,
#Partially deleted in new
chr10	53821109	54801291	chr10:53821109-54801291	1	-	53821857	54664262	789624	32	2249,156,219,177,89,216,128,141,110,113,141,117,225,306,129,94,80,133,194,150,135,207,113,109,171,111,120,156,161,66,119,367,	0,6283,10205,19210,36065,45532,82133,117705,119756,138622,140642,174539,199082,201782,245647,258221,268874,311765,331990,362334,364024,374573,392826,415713,496161,508486,525255,548010,557672,706702,843062,979815,
#Partially deleted in new
chr10	53821109	54801291	chr10:53821109-54801291	1	-	53821857	54664262	789624	32	2249,6,156,219,177,89,216,128,141,110,113,141,117,225,306,129,94,80,133,194,150,135,207,113,109,171,111,120,156,161,119,367,	0,4026,6283,10205,19210,36065,45532,82133,117705,119756,138622,140642,174539,199082,201782,245647,258221,268874,311765,331990,362334,364024,374573,392826,415713,496161,508486,525255,548010,557672,843062,979815,
#Partially deleted in new
chr10	53821109	54801291	chr10:53821109-54801291	1	-	53821857	54664262	789624	32	2249,6,156,9,219,177,89,216,128,141,110,113,141,117,225,306,129,94,194,150,135,207,113,109,171,111,120,156,161,66,119,367,	0,4026,6283,7455,10205,19210,36065,45532,82133,117705,119756,138622,140642,174539,199082,201782,245647,258221,331990,362334,364024,374573,392826,415713,496161,508486,525255,548010,557672,706702,843062,979815,
#Partially deleted in new
chr10	53821109	54801291	chr10:53821109-54801291	0	-	54079376	54664262	789624	33	2249,6,156,9,219,177,89,216,128,141,110,113,141,117,225,306,129,94,133,194,150,135,207,113,109,171,111,120,156,161,66,119,367,	0,4026,6283,7455,10205,19210,36065,45532,82133,117705,119756,138622,140642,174539,199082,201782,245647,258221,311765,331990,362334,364024,374573,392826,415713,496161,508486,525255,548010,557672,706702,843062,979815,
#Partially deleted in new
chr10	53821275	54801291	chr10:53821275-54801291	3	-	53821857	54664262	0	33	2083,156,9,219,177,89,216,128,141,110,113,141,117,225,306,129,94,80,133,194,150,135,207,113,109,171,111,120,156,161,66,119,367,	0,6117,7289,10039,19044,35899,45366,81967,117539,119590,138456,140476,174373,198916,201616,245481,258055,268708,311599,331824,362168,363858,374407,392660,415547,495995,508320,525089,547844,557506,706536,842896,979649,
#Partially deleted in new
chr10	53821275	53907217	chr10:53821275-53907217	0	-	53821275	53821275	8553170	10	2083,156,9,219,177,89,216,128,50,342,	0,6117,7289,10039,19044,35899,45366,81967,83917,85600,
#Partially deleted in new
chr10	53994578	54801188	chr10:53994578-54801188	1	-	53995630	54664262	0	21	1187,225,306,129,94,80,133,194,150,135,207,113,109,171,111,120,156,161,66,119,264,	0,25613,28313,72178,84752,95405,138296,158521,188865,190555,201104,219357,242244,322692,335017,351786,374541,384203,533233,669593,806346,
#Partially deleted in new
chr10	54378815	55627942	chr10:54378815-55627942	0	-	54378815	54664262	789624	6	127,119,51,76,129,78,	0,285356,518634,787760,1248809,1249049,
#Partially deleted in new
chr10	54378822	55319614	chr10:54378822-55319614	0	-	54378822	54664262	789624	6	120,66,119,51,76,16,	0,148989,285349,518627,787753,940776,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	54452422	54452511	chr10:54452422-54452511	3	-	54452422	54452422	8553170	1	89,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	54486229	54656051	chr10:54486229-54656051	3	+	54486229	54486229	789624	6	87,111,1294,191,117,500,	0,82335,119462,132904,168682,169322,
#Partially deleted in new
chr10	54599677	54600683	chr10:54599677-54600683	7	+	54599677	54599677	16724991	1	1006,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	54607873	54607957	chr10:54607873-54607957	3	-	54607873	54607873	5263520	1	84,	0,
#Partially deleted in new
chr10	54864673	54869122	chr10:54864673-54869122	3	-	54864673	54864673	8553170	2	123,84,	0,4365,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	55247754	55597233	chr10:55247754-55597233	3	-	55247754	55247754	8553170	4	134,122,62,121,	0,118337,327895,349358,
#Deleted in new
chr10	55468326	55469222	chr10:55468326-55469222	3	+	55468326	55468326	8553170	2	170,146,	0,750,
#Partially deleted in new
chr10	55506218	55513217	chr10:55506218-55513217	3	+	55506218	55506218	8553170	2	68,368,	0,6631,
#Deleted in new
chr10	55599302	55600041	chr10:55599302-55600041	3	+	55599899	55599974	789624	1	739,	0,
#Deleted in new
chr10	55667340	55668350	chr10:55667340-55668350	7	-	55667340	55667340	16724991	1	1010,	0,
#Deleted in new
chr10	55746550	55746908	chr10:55746550-55746908	7	+	55746550	55746550	16724991	1	358,	0,
#Deleted in new
chr10	56357227	56361275	chr10:56357227-56361275	3	-	56358417	56361236	789624	9	958,83,169,143,57,167,124,91,80,	0,1149,1328,1577,2248,2459,2790,3065,3968,
#Deleted in new
chr10	56357437	56361273	chr10:56357437-56361273	1	-	56358417	56361236	789624	8	1022,169,143,57,167,124,91,78,	0,1118,1367,2038,2249,2580,2855,3758,
#Deleted in new
chr10	56357437	56361259	chr10:56357437-56361259	0	-	56357437	56357437	8553170	7	748,83,169,143,57,697,64,	0,939,1118,1367,2038,2249,3758,
#Deleted in new
chr10	56357444	56359758	chr10:56357444-56359758	1	-	56358417	56359749	789624	5	1015,169,143,57,72,	0,1111,1360,2031,2242,
#Deleted in new
chr10	56357478	56361265	chr10:56357478-56361265	0	-	56360277	56361236	789624	8	707,83,132,39,57,167,366,70,	0,898,1077,1430,1997,2208,2539,3717,
#Deleted in new
chr10	56357815	56359731	chr10:56357815-56359731	0	-	56357815	56357815	8553170	6	370,83,132,143,57,45,	0,561,740,989,1660,1871,
#Deleted in new
chr10	56358142	56361266	chr10:56358142-56361266	1	-	56358417	56361236	789624	9	43,83,132,39,57,167,124,91,71,	0,234,413,766,1333,1544,1875,2150,3053,
#Deleted in new
chr10	56358186	56360142	chr10:56358186-56360142	0	-	56358186	56358186	8553170	6	273,132,39,57,167,125,	0,369,722,1289,1500,1831,
#Deleted in new
chr10	56358630	56360381	chr10:56358630-56360381	0	-	56358630	56358630	8553170	5	94,143,57,167,202,	0,174,845,1056,1549,
#Partially deleted in new
chr10	56595962	56596031	chr10:56595962-56596031	3	-	56595962	56595962	8553170	1	69,	0,
#Deleted in new
chr10	57304478	57304559	chr10:57304478-57304559	3	-	57304478	57304478	5263520	1	81,	0,
#Deleted in new
chr10	57513156	57513425	chr10:57513156-57513425	7	+	57513156	57513156	16724991	1	269,	0,
#Deleted in new
chr10	57955294	57957178	chr10:57955294-57957178	7	+	57955294	57955294	16724991	1	1884,	0,
#Deleted in new
chr10	57982284	57982993	chr10:57982284-57982993	7	+	57982284	57982284	16724991	1	709,	0,
#Deleted in new
chr10	58106422	58106879	chr10:58106422-58106879	7	-	58106422	58106422	16724991	1	457,	0,
#Partially deleted in new
chr10	58191516	58267934	chr10:58191516-58267934	3	-	58196075	58267611	0	6	5182,82,173,97,86,513,	0,7723,24628,35526,46212,75905,
#Deleted in new
chr10	58212540	58213036	chr10:58212540-58213036	7	-	58212540	58212540	16724991	1	496,	0,
#Partially deleted in new
chr10	58269057	58289586	chr10:58269057-58289586	3	+	58269273	58287650	0	3	247,206,2026,	0,8059,18503,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	58269177	58288348	chr10:58269177-58288348	0	+	58269177	58269177	8553170	5	127,95,206,197,73,	0,6940,7939,18383,19098,
#Partially deleted in new
chr10	58273385	58287832	chr10:58273385-58287832	0	+	58273385	58273385	8553170	3	99,206,272,	0,3731,14175,
#Partially deleted in new
chr10	58273432	58287999	chr10:58273432-58287999	0	+	58273432	58273432	8553170	4	52,206,184,439,	0,3684,9466,14128,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	58304552	58305621	chr10:58304552-58305621	3	+	58304552	58304552	8553170	2	267,61,	0,1008,
#Deleted in new
chr10	58325613	58327030	chr10:58325613-58327030	3	-	58325613	58325613	8553170	1	1417,	0,
#Partially deleted in new
chr10	58334974	58370753	chr10:58334974-58370753	3	+	58335201	58368765	0	7	251,64,32,78,106,94,2034,	0,26363,26520,28634,29796,32948,33745,
#Partially deleted in new
chr10	58334978	58370751	chr10:58334978-58370751	1	+	58361395	58368765	789624	6	247,64,78,106,94,2032,	0,26359,28630,29792,32944,33741,
#Partially deleted in new
chr10	58364455	58369043	chr10:58364455-58369043	0	+	58364455	58364455	8553170	3	421,94,324,	0,3467,4264,
#Partially deleted in new
chr10	58368207	58369595	chr10:58368207-58369595	0	+	58368207	58368207	8553170	1	1388,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	58385021	58399221	chr10:58385021-58399221	3	+	58385547	58395074	0	7	627,119,71,150,96,57,4294,	0,1198,3168,3648,5743,9336,9906,
#Partially deleted in new
chr10	58385344	58395184	chr10:58385344-58395184	0	+	58385344	58385344	8553170	8	304,119,67,71,150,96,57,257,	0,875,1305,2845,3325,5420,9013,9583,
#Partially deleted in new
chr10	58385433	58395288	chr10:58385433-58395288	1	+	58385547	58395074	0	6	215,119,71,150,57,361,	0,786,2756,3236,8924,9494,
#Partially deleted in new
chr10	58385603	58394539	chr10:58385603-58394539	0	+	58385603	58394534	789624	6	45,119,71,150,96,182,	0,616,2586,3066,5161,8754,
#Partially deleted in new
chr10	58513139	58831437	chr10:58513139-58831437	3	+	58513143	58828891	0	21	194,47,70,80,159,54,195,252,132,187,162,197,133,157,166,40,155,157,161,100,2677,	0,107715,188934,271861,273783,275230,276122,276542,280344,283200,285259,285916,287054,287750,289937,293444,293864,300690,304422,307229,315621,
#Partially deleted in new
chr10	58620848	58650867	chr10:58620848-58650867	0	+	58620848	58620848	8553170	2	53,760,	0,29259,
#Deleted in new
chr10	58715553	58716257	chr10:58715553-58716257	7	+	58715553	58715553	16724991	1	704,	0,
#Partially deleted in new
chr10	58793534	58814314	chr10:58793534-58814314	1	+	58793558	58814096	789624	10	81,187,162,197,133,157,166,40,155,485,	0,2805,4864,5521,6659,7355,9542,13049,13469,20295,
#Deleted in new
chr10	58869183	58869528	chr10:58869183-58869528	3	+	58869183	58869183	8553170	1	345,	0,
#Partially deleted in new
chr10	58999625	59001543	chr10:58999625-59001543	3	+	58999625	58999625	789624	2	162,315,	0,1603,
#Deleted in new
chr10	59088700	59089039	chr10:59088700-59089039	7	-	59088700	59088700	16724991	1	339,	0,
#Deleted in new
chr10	59136624	59138182	chr10:59136624-59138182	7	-	59136624	59136624	16724991	1	1558,	0,
#Partially deleted in new
chr10	59176589	59247774	chr10:59176589-59247774	3	+	59176853	59245591	789624	5	370,197,175,118,2718,	0,57714,59893,61998,68467,
#Partially deleted in new
chr10	59176660	59246147	chr10:59176660-59246147	0	+	59176853	59206797	789624	6	299,91,197,175,118,1091,	0,30093,57643,59822,61927,68396,
#Partially deleted in new
chr10	59177257	59247774	chr10:59177257-59247774	1	+	59177590	59245591	789624	5	361,197,175,118,2718,	0,57046,59225,61330,67799,
#Deleted in new
chr10	59236526	59238768	chr10:59236526-59238768	0	+	59236526	59236526	8553170	2	131,181,	0,2061,
#Partially deleted in new
chr10	59246128	59362550	chr10:59246128-59362550	3	-	59247613	59362460	789624	14	1609,102,200,96,212,82,139,211,85,64,119,205,57,152,	0,5446,6670,8219,16305,17956,22424,23770,37234,56672,77859,106141,109758,116270,
#Partially deleted in new
chr10	59246129	59362594	chr10:59246129-59362594	1	-	59247613	59352344	789624	15	1608,102,197,96,212,82,139,211,85,64,119,205,57,85,196,	0,5445,6669,8218,16304,17955,22423,23769,37233,56671,77858,106140,109757,114896,116269,
#Partially deleted in new
chr10	59246133	59362547	chr10:59246133-59362547	1	-	59247613	59362460	789624	14	1604,102,200,96,212,82,139,211,148,64,119,205,57,149,	0,5441,6665,8214,16300,17951,22419,23765,37229,56667,77854,106136,109753,116265,
#Partially deleted in new
chr10	59246135	59362564	chr10:59246135-59362564	1	-	59247613	59362460	789624	14	1602,102,197,96,212,82,139,211,148,64,119,205,57,166,	0,5439,6663,8212,16298,17949,22417,23763,37227,56665,77852,106134,109751,116263,
#Partially deleted in new
chr10	59246135	59362590	chr10:59246135-59362590	0	-	59355937	59362460	789624	15	1602,102,197,96,212,82,139,211,85,64,119,205,57,85,192,	0,5439,6663,8212,16298,17949,22417,23763,37227,56665,77852,106134,109751,114890,116263,
#Partially deleted in new
chr10	59246178	59362594	chr10:59246178-59362594	1	-	59247613	59362460	789624	12	1559,102,200,96,139,211,85,64,119,205,57,196,	0,5396,6620,8169,22374,23720,37184,56622,77809,106091,109708,116220,
#Partially deleted in new
chr10	59247566	59362903	chr10:59247566-59362903	1	-	59247613	59352344	789624	15	171,102,200,96,212,82,139,211,85,64,119,205,57,39,328,	0,4008,5232,6781,14867,16518,20986,22332,35796,55234,76421,104703,108320,114832,115009,
#Partially deleted in new
chr10	59247691	59302856	chr10:59247691-59302856	0	-	59254435	59302856	789624	6	46,102,200,96,85,56,	0,3883,5107,6656,35671,55109,
#Partially deleted in new
chr10	59251168	59362508	chr10:59251168-59362508	1	-	59251486	59362460	789624	13	508,200,96,212,82,139,211,85,64,119,205,57,110,	0,1630,3179,11265,12916,17384,18730,32194,51632,72819,101101,104718,111230,
#Partially deleted in new
chr10	59253716	59362460	chr10:59253716-59362460	1	-	59254302	59362460	789624	11	727,212,82,139,211,85,64,119,205,57,62,	0,8717,10368,14836,16182,29646,49084,70271,98553,102170,108682,
#Partially deleted in new
chr10	59263881	59270035	chr10:59263881-59270035	0	-	59264037	59270035	789624	3	285,139,137,	0,4671,6017,
#Deleted in new
chr10	59268591	59270321	chr10:59268591-59270321	0	-	59268591	59268591	8553170	2	100,423,	0,1307,
#Partially deleted in new
chr10	59268655	59283681	chr10:59268655-59283681	0	-	59268655	59268655	8553170	3	36,211,319,	0,1243,14707,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	59269946	59297258	chr10:59269946-59297258	0	-	59269946	59269946	8553170	3	163,85,357,	0,13416,26955,
#Partially deleted in new
chr10	59282146	59282835	chr10:59282146-59282835	3	+	59282146	59282146	8553170	2	62,274,	0,415,
#Partially deleted in new
chr10	59300705	59324106	chr10:59300705-59324106	0	-	59300705	59300705	8553170	3	542,64,119,	0,2095,23282,
#Partially deleted in new
chr10	59301151	59362701	chr10:59301151-59362701	0	-	59301151	59301151	8553170	6	96,119,205,57,39,126,	0,22836,51118,54735,61247,61424,
#Partially deleted in new
chr10	59323229	59352353	chr10:59323229-59352353	0	-	59323229	59323229	8553170	3	235,119,84,	0,758,29040,
#Partially deleted in new
chr10	59324070	59362522	chr10:59324070-59362522	0	-	59355937	59362460	789624	6	36,89,205,57,85,124,	0,3554,28199,31816,36955,38328,
#Partially deleted in new
chr10	59352269	59363181	chr10:59352269-59363181	0	-	59352269	59352344	789624	5	205,57,85,39,73,	0,3617,8756,10129,10839,
#Partially deleted in new
chr10	59352328	59362830	chr10:59352328-59362830	0	-	59352328	59352344	8553170	5	146,57,85,39,255,	0,3558,8697,10070,10247,
#Partially deleted in new
chr10	59551403	59551878	chr10:59551403-59551878	7	-	59551403	59551403	16724991	1	475,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	59578466	59596363	chr10:59578466-59596363	0	+	59578466	59578466	8553170	3	610,100,39,	0,16485,17858,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	59594951	59650345	chr10:59594951-59650345	3	+	59594951	59594951	8553170	7	100,101,78,159,98,130,1676,	0,27170,27950,33567,34393,35057,53718,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	59650760	59710079	chr10:59650760-59710079	1	-	59652771	59684291	789624	6	2190,915,96,144,232,601,	0,2914,13466,22009,33335,58718,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	59650764	59736002	chr10:59650764-59736002	3	-	59652771	59684291	789624	6	2186,915,96,144,232,73,	0,2910,13462,22005,33331,85165,
#Partially deleted in new
chr10	59684097	59709522	chr10:59684097-59709522	0	-	59684097	59684097	8553170	3	230,178,44,	0,24508,25381,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	59736691	59738573	chr10:59736691-59738573	0	-	59737059	59737200	789624	2	529,115,	0,1767,
#Partially deleted in new
chr10	59736994	59753445	chr10:59736994-59753445	1	-	59737059	59737200	789624	3	226,104,92,	0,1464,16359,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	59737197	59739291	chr10:59737197-59739291	0	-	59737197	59737197	8553170	3	23,104,294,	0,1261,1800,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	59737197	59739305	chr10:59737197-59739305	0	-	59737197	59737197	8553170	2	23,847,	0,1261,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	59738037	59739370	chr10:59738037-59739370	0	-	59738037	59738037	8553170	2	525,373,	0,960,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	59738466	59739682	chr10:59738466-59739682	0	-	59738466	59738466	8553170	2	96,685,	0,531,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	59738471	59756041	chr10:59738471-59756041	0	-	59738471	59738471	8553170	3	91,122,558,	0,526,17012,
#Partially deleted in new
chr10	59788762	59906656	chr10:59788762-59906656	3	-	59792916	59906424	789624	9	4349,125,101,157,161,104,129,150,535,	0,5710,15657,18159,23872,25889,43762,63790,117359,
#Partially deleted in new
chr10	59791751	59805576	chr10:59791751-59805576	0	-	59791751	59791751	8553170	3	1360,125,1157,	0,2721,12668,
#Partially deleted in new
chr10	59806443	59812728	chr10:59806443-59812728	0	-	59806443	59806443	8553170	2	635,94,	0,6191,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	59955429	59960882	chr10:59955429-59960882	3	-	59955429	59955429	8553170	3	3894,403,32,	0,4136,5421,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	59958216	59960913	chr10:59958216-59960913	0	-	59958216	59958216	789624	2	1752,63,	0,2634,
#Deleted in new
chr10	59958284	59958671	chr10:59958284-59958671	0	-	59958284	59958284	8553170	1	387,	0,
#Partially deleted in new
chr10	60026297	60389730	chr10:60026297-60389730	3	-	60042690	60389538	0	44	3529,88,379,91,144,132,75,7812,82,27,123,126,229,97,208,212,155,225,107,103,124,63,73,96,99,99,99,198,99,99,198,99,99,99,198,99,99,99,186,99,99,99,102,306,	0,16374,29360,33042,36813,37859,41637,42339,54239,55852,56317,57194,58304,58859,60379,61849,79607,82532,87927,107973,112666,140293,140526,146010,146602,146790,155031,160417,169847,170229,172042,173831,176704,179494,181738,187114,208390,235561,237537,243833,252476,252752,253240,363127,
#Partially deleted in new
chr10	60028400	60733490	chr10:60028400-60733490	1	-	60042690	60733319	0	44	1426,88,379,91,309,144,132,75,82,123,126,229,97,208,212,155,225,107,103,124,63,73,96,99,99,99,198,99,99,198,99,99,99,198,99,99,99,186,99,99,99,102,39,228,	0,14271,27257,30939,31297,34710,35756,39534,52136,54214,55091,56201,56756,58276,59746,77504,80429,85824,105870,110563,138190,138423,143907,144499,144687,152928,158314,167744,168126,169939,171728,174601,177391,179635,185011,206287,233458,235434,241730,250373,250649,251137,586785,704862,
#Partially deleted in new
chr10	60028867	60082686	chr10:60028867-60082686	0	-	60042690	60082686	789624	11	959,88,379,91,309,144,132,75,82,27,72,	0,13804,26790,30472,30830,34243,35289,39067,51669,53282,53747,
#Partially deleted in new
chr10	60029689	60141016	chr10:60029689-60141016	1	-	60042690	60140367	0	21	137,88,379,91,309,144,132,75,82,123,126,229,97,208,212,155,225,107,103,124,665,	0,12982,25968,29650,30008,33421,34467,38245,50847,52925,53802,54912,55467,56987,58457,76215,79140,84535,104581,109274,110662,
#Partially deleted in new
chr10	60029689	60056038	chr10:60029689-60056038	0	-	60042690	60056038	789624	4	137,88,51,381,	0,12982,23987,25968,
#Partially deleted in new
chr10	60029690	60044803	chr10:60029690-60044803	0	-	60029690	60029690	8553170	2	136,2132,	0,12981,
#Partially deleted in new
chr10	60029699	60051604	chr10:60029699-60051604	0	-	60029699	60029699	8553170	5	127,88,60,84,130,	0,12972,14374,14565,21775,
#Partially deleted in new
chr10	60029700	60059430	chr10:60029700-60059430	0	-	60042690	60059430	789624	4	126,85,379,91,	0,12971,25957,29639,
#Partially deleted in new
chr10	60029796	60572663	chr10:60029796-60572663	1	-	60042690	60572527	0	44	30,88,379,91,309,144,132,75,82,123,126,229,97,208,212,155,225,107,103,124,54,63,73,96,99,99,99,198,99,99,198,99,99,99,198,99,99,99,186,99,99,99,102,199,	0,12875,25861,29543,29901,33314,34360,38138,50740,52818,53695,54805,55360,56880,58350,76108,79033,84428,104474,109167,116171,136794,137027,142511,143103,143291,151532,156918,166348,166730,168543,170332,173205,175995,178239,183615,204891,232062,234038,240334,248977,249253,249741,542668,
#Partially deleted in new
chr10	60042671	60106059	chr10:60042671-60106059	0	-	60042690	60106059	789624	18	88,60,84,87,379,667,144,132,75,46,27,123,126,229,97,208,212,155,	0,1402,1593,8803,12986,16668,20439,21485,25263,37901,39478,39943,40820,41930,42485,44005,45475,63233,
#Partially deleted in new
chr10	60042671	60055832	chr10:60042671-60055832	0	-	60042690	60055832	789624	6	88,60,84,87,51,175,	0,1402,1593,8803,11005,12986,
#Partially deleted in new
chr10	60042690	60109054	chr10:60042690-60109054	0	-	60042690	60109054	789624	16	69,379,91,144,132,75,2583,82,123,126,229,97,208,212,155,225,	0,12967,16649,20420,21466,25244,31181,37846,39924,40801,41911,42466,43986,45456,63214,66139,
#Partially deleted in new
chr10	60050667	60059623	chr10:60050667-60059623	0	+	60050667	60050667	8553170	2	62,290,	0,8666,
#Partially deleted in new
chr10	60055775	60059816	chr10:60055775-60059816	0	-	60055775	60055775	8553170	2	261,477,	0,3564,
#Partially deleted in new
chr10	60055873	60060743	chr10:60055873-60060743	3	+	60055873	60055873	8553170	2	136,1410,	0,3460,
#Partially deleted in new
chr10	60055999	60070463	chr10:60055999-60070463	0	-	60055999	60070463	789624	6	37,91,144,132,75,486,	0,3340,7111,8157,11935,13978,
#Partially deleted in new
chr10	60059391	60064288	chr10:60059391-60064288	0	-	60059391	60064288	789624	4	39,336,144,132,	0,306,3719,4765,
#Partially deleted in new
chr10	60059699	60080620	chr10:60059699-60080620	0	-	60059699	60080620	789624	5	127,144,132,75,84,	0,3411,4457,8235,20837,
#Partially deleted in new
chr10	60059939	60070283	chr10:60059939-60070283	0	-	60059939	60070283	789624	5	67,144,132,75,306,	0,3171,4217,7995,10038,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	60061920	60064288	chr10:60061920-60064288	0	-	60063096	60064288	789624	2	1334,132,	0,2236,
#Partially deleted in new
chr10	60063108	60072569	chr10:60063108-60072569	0	-	60068855	60072569	789624	5	146,132,75,221,2592,	0,1048,4826,5540,6869,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	60081740	60081854	chr10:60081740-60081854	3	+	60081740	60081740	8553170	1	114,	0,
#Partially deleted in new
chr10	60082507	60084715	chr10:60082507-60084715	0	-	60082507	60082507	8553170	3	230,126,114,	0,984,2094,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr10	60083938	60572909	chr10:60083938-60572909	0	-	60200251	60572527	789624	33	892,97,208,212,155,225,33,107,88,12,124,73,96,99,99,99,198,99,99,198,135,99,99,198,99,99,99,186,99,99,99,102,445,	0,1218,2738,4208,21966,24891,27795,30286,50332,53403,55025,82885,88369,88961,89149,97390,102776,112206,112588,114401,116190,119063,121853,124097,129473,150749,177920,179896,186192,194835,195111,195599,488526,
#Deleted in new
chr10	60086542	60088358	chr10:60086542-60088358	0	-	60086542	60086542	8553170	2	342,212,	0,1604,
#Partially deleted in new
chr10	60088272	60114246	chr10:60088272-60114246	0	-	60088272	60114246	789624	5	86,155,99,225,22,	0,17632,19915,20557,25952,
#Partially deleted in new
chr10	60106021	60139400	chr10:60106021-60139400	0	-	60106021	60139076	789624	6	38,225,107,103,124,63,	0,2808,8203,28249,32942,33316,
#Partially deleted in new
chr10	60108829	60139087	chr10:60108829-60139087	0	-	60108829	60139087	789624	6	225,33,107,103,12,124,	0,2904,5395,25441,28512,30134,
#Partially deleted in new
chr10	60108900	60140040	chr10:60108900-60140040	0	-	60108900	60139076	789624	5	154,107,103,124,56,	0,5324,25370,30063,31084,
#Partially deleted in new
chr10	60134270	60139756	chr10:60134270-60139756	0	-	60134270	60139076	789624	3	103,124,342,	0,4693,5144,
#Partially deleted in new
chr10	60138516	60166875	chr10:60138516-60166875	1	-	60138932	60166875	789624	3	571,54,52,	0,7451,28307,
#Partially deleted in new
chr10	60138516	60166896	chr10:60138516-60166896	0	-	60138932	60166896	789624	4	571,54,63,73,	0,7451,28074,28307,
#Deleted in new
chr10	60138516	60140515	chr10:60138516-60140515	1	-	60138642	60139076	789624	3	205,124,164,	0,447,1835,
#Deleted in new
chr10	60139911	60140877	chr10:60139911-60140877	3	+	60139911	60139911	8553170	2	141,345,	0,621,
#Partially deleted in new
chr10	60234687	60300482	chr10:60234687-60300482	0	-	60234687	60300354	789624	8	99,99,186,99,99,99,102,164,	0,27171,29147,35443,44086,44362,44850,65631,
#Partially deleted in new
chr10	60507500	60733324	chr10:60507500-60733324	0	-	60507500	60507500	8553170	3	1125,39,62,	0,107685,225762,
#Deleted in new
chr10	60684504	60685209	chr10:60684504-60685209	7	+	60684504	60684504	16724991	1	705,	0,
#Partially deleted in new
chr10	60778330	60791969	chr10:60778330-60791969	0	+	60780165	60791969	789624	6	129,62,157,124,171,80,	0,1810,6374,7333,9729,13559,
#Partially deleted in new
chr10	60778364	60787069	chr10:60778364-60787069	0	+	60778364	60778364	8553170	4	95,62,157,1406,	0,1776,6340,7299,
#Partially deleted in new
chr10	60778453	60794843	chr10:60778453-60794843	1	+	60780165	60793975	0	7	117,62,157,124,164,142,967,	0,1687,6251,7210,13436,13694,15423,
#Partially deleted in new
chr10	60778453	60794852	chr10:60778453-60794852	3	+	60780165	60793975	0	8	117,62,157,124,171,164,142,976,	0,1687,6251,7210,9606,13436,13694,15423,
#Deleted in new
chr10	60778456	60783593	chr10:60778456-60783593	0	+	60778456	60778456	8553170	3	114,62,100,	0,1684,5037,
#Partially deleted in new
chr10	60778492	60794828	chr10:60778492-60794828	1	+	60780165	60793975	789624	8	176,62,157,124,175,160,142,952,	0,1648,6212,7171,9567,13401,13655,15384,
#Partially deleted in new
chr10	60778495	60794843	chr10:60778495-60794843	1	+	60780165	60792147	789624	9	75,62,157,124,171,164,7,157,967,	0,1645,6209,7168,9564,13394,13627,13637,15381,
#Partially deleted in new
chr10	60780152	60794852	chr10:60780152-60794852	1	+	60780165	60793975	0	6	50,157,124,164,142,976,	0,4552,5511,11737,11995,13724,
#Partially deleted in new
chr10	60787670	60791927	chr10:60787670-60791927	0	+	60787670	60787670	8553170	2	564,34,	0,4223,
#Partially deleted in new
chr10	60869437	60944247	chr10:60869437-60944247	1	-	60871481	60911542	789624	11	2214,106,89,151,119,974,186,104,202,51,277,	0,2747,5516,8470,16674,18774,23372,41449,41913,72366,74533,
#Partially deleted in new
chr10	60869437	61001440	chr10:60869437-61001440	3	-	60871481	60911542	789624	12	2214,106,89,151,119,974,186,104,202,51,101,42,	0,2747,5516,8470,16674,18774,23372,41449,41913,72366,116407,131961,
#Deleted in new
chr10	60871173	60871667	chr10:60871173-60871667	0	-	60871173	60871173	8553170	2	152,224,	0,270,
#Deleted in new
chr10	60871177	60872275	chr10:60871177-60872275	0	-	60871177	60871177	8553170	3	148,208,91,	0,266,1007,
#Deleted in new
chr10	60871471	60875043	chr10:60871471-60875043	0	-	60871471	60871471	8553170	3	180,248,90,	0,571,3482,
#Partially deleted in new
chr10	60877117	60888469	chr10:60877117-60888469	0	-	60877117	60877117	8553170	3	66,151,258,	0,790,11094,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	60912764	60912927	chr10:60912764-60912927	3	-	60912764	60912764	8553170	1	163,	0,
#Partially deleted in new
chr10	61016274	61026420	chr10:61016274-61026420	3	+	61016274	61016274	789624	2	67,629,	0,9517,
#Partially deleted in new
chr10	61406642	61453238	chr10:61406642-61453238	0	-	61410321	61453081	789624	7	473,1298,77,221,114,79,348,	0,2806,6816,22283,24576,29527,46248,
#Partially deleted in new
chr10	61406646	61453450	chr10:61406646-61453450	3	-	61410321	61453081	789624	6	4100,77,221,114,79,560,	0,6812,22279,24572,29523,46244,
#Partially deleted in new
chr10	61409446	61414500	chr10:61409446-61414500	0	-	61409446	61409446	8553170	2	1300,1042,	0,4012,
#Partially deleted in new
chr10	61412892	61431332	chr10:61412892-61431332	0	-	61412900	61431332	789624	4	106,77,221,114,	0,566,16033,18326,
#Partially deleted in new
chr10	61412892	61453167	chr10:61412892-61453167	0	-	61416056	61453081	789624	7	106,1655,68,221,114,79,277,	0,566,3163,16033,18326,23277,39998,
#Partially deleted in new
chr10	61452638	61481956	chr10:61452638-61481956	3	+	61452638	61452638	8553170	3	651,95,117,	0,14859,29201,
#Partially deleted in new
chr10	61662960	61766766	chr10:61662960-61766766	3	+	61681242	61766013	789624	7	205,170,145,73,123,141,828,	0,18182,23080,27588,97098,97902,102978,
#Partially deleted in new
chr10	61662960	61766400	chr10:61662960-61766400	1	+	61681242	61766013	8553170	8	72,104,170,145,73,123,141,462,	0,9671,18182,23080,27588,97098,97902,102978,
#Partially deleted in new
chr10	61662996	61690620	chr10:61662996-61690620	0	+	61686048	61690620	789624	3	36,145,72,	0,23044,27552,
#Deleted in new
chr10	61684891	61685388	chr10:61684891-61685388	3	-	61684891	61684891	8553170	1	497,	0,
#Partially deleted in new
chr10	61781744	61821246	chr10:61781744-61821246	3	-	61781744	61781744	8553170	5	95,178,115,22,100,	0,483,12606,38389,39402,
#Partially deleted in new
chr10	61901299	62096944	chr10:61901299-62096944	3	+	61901709	62093030	0	10	431,255,226,231,113,202,53,98,199,6083,	0,859,38883,98791,149588,155817,157943,168400,184402,189562,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	61901683	62025352	chr10:61901683-62025352	1	+	61901709	62024704	789624	5	47,255,226,231,680,	0,475,38499,98407,122989,
#Partially deleted in new
chr10	62046661	62057268	chr10:62046661-62057268	0	+	62046661	62046661	8553170	3	300,113,152,	0,4226,10455,
#Partially deleted in new
chr10	62049210	62093064	chr10:62049210-62093064	1	+	62049479	62093030	0	7	273,113,202,53,98,199,2203,	0,1677,7906,10032,20489,36491,41651,
#Partially deleted in new
chr10	62183034	62236263	chr10:62183034-62236263	1	-	62184321	62236094	789624	9	1353,161,108,166,63,132,107,95,198,	0,15248,16719,21822,31994,34083,35160,40203,53031,
#Partially deleted in new
chr10	62193193	62268707	chr10:62193193-62268707	3	-	62197907	62268610	789624	12	5250,108,166,132,107,95,198,118,54,59,197,157,	0,6560,11663,23924,25001,30044,42872,46454,47948,52805,69431,75357,
#Partially deleted in new
chr10	62238156	62268707	chr10:62238156-62268707	1	-	62239643	62268610	789624	5	1609,54,59,197,157,	0,2985,7842,24468,30394,
#Partially deleted in new
chr10	62289520	62304033	chr10:62289520-62304033	3	+	62289520	62289520	8553170	3	127,45,534,	0,12805,13979,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	62350005	62350297	chr10:62350005-62350297	3	+	62350005	62350005	8553170	1	292,	0,
#Partially deleted in new
chr10	62374191	62402458	chr10:62374191-62402458	3	+	62376193	62399789	789624	5	267,756,181,38,2931,	0,1989,14204,24548,25336,
#Partially deleted in new
chr10	62374191	62480288	chr10:62374191-62480288	1	+	62376193	62479896	789624	5	267,756,181,57,413,	0,1989,14204,85549,105684,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	62374191	62672011	chr10:62374191-62672011	3	+	62374191	62374191	8553170	8	267,756,181,57,148,91,74,1805,	0,1989,14204,85549,248911,282204,291937,296015,
#Partially deleted in new
chr10	62374352	62402458	chr10:62374352-62402458	0	+	62374352	62374352	8553170	4	106,181,38,2931,	0,14043,24387,25175,
#Partially deleted in new
chr10	62375543	62376352	chr10:62375543-62376352	0	+	62376193	62376352	789624	2	317,172,	0,637,
#Partially deleted in new
chr10	62376193	62670301	chr10:62376193-62670301	1	+	62376193	62670301	789624	7	743,181,57,148,91,74,95,	0,12202,83547,246909,280202,289935,294013,
#Partially deleted in new
chr10	62643772	62670374	chr10:62643772-62670374	0	+	62643772	62643772	8553170	4	191,88,91,168,	0,11070,12623,26434,
#Partially deleted in new
chr10	62643772	62670374	chr10:62643772-62670374	0	+	62643772	62643772	8553170	5	191,88,91,74,168,	0,11070,12623,22356,26434,
#Partially deleted in new
chr10	62643772	62670374	chr10:62643772-62670374	0	+	62643772	62643772	8553170	3	191,74,168,	0,22356,26434,
#Partially deleted in new
chr10	62643772	62670374	chr10:62643772-62670374	3	+	62643925	62670301	789624	6	191,88,265,91,74,168,	0,11070,11594,12623,22356,26434,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	62643870	62659272	chr10:62643870-62659272	0	+	62643870	62643870	8553170	5	93,88,265,91,1270,	0,10972,11496,12525,14132,
#Partially deleted in new
chr10	62682651	62805887	chr10:62682651-62805887	3	-	62682651	62682651	8553170	4	364,160,40,159,	0,755,3388,123077,
#Deleted in new
chr10	62741207	62741385	chr10:62741207-62741385	7	-	62741207	62741207	16724991	1	178,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	62793561	62805887	chr10:62793561-62805887	1	-	62793561	62793561	8553170	3	413,116,159,	0,731,12167,
#Deleted in new
chr10	62804856	62808483	chr10:62804856-62808483	3	+	62805059	62805872	789624	1	3627,	0,
#Deleted in new
chr10	62811995	62816355	chr10:62811995-62816355	1	-	62813206	62816029	789624	2	2473,495,	0,3865,
#Deleted in new
chr10	62811995	62816275	chr10:62811995-62816275	0	-	62811995	62811995	8553170	2	967,108,	0,4172,
#Deleted in new
chr10	62811999	62816315	chr10:62811999-62816315	1	-	62813206	62815879	789624	3	2469,109,246,	0,3861,4070,
#Deleted in new
chr10	62812002	62819167	chr10:62812002-62819167	3	-	62813206	62816029	789624	4	2466,209,107,62,	0,3858,6538,7103,
#Deleted in new
chr10	62814219	62816366	chr10:62814219-62816366	0	-	62814219	62816029	789624	3	249,209,114,	0,1641,2033,
#Partially deleted in new
chr10	62814432	62919900	chr10:62814432-62919900	0	-	62814432	62814432	8553170	8	36,109,44,81,126,97,110,83,	0,1428,79074,80024,87162,102528,104668,105385,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	63110138	63110246	chr10:63110138-63110246	3	+	63110138	63110138	8553170	1	108,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	63123937	63125537	chr10:63123937-63125537	3	-	63123937	63123937	8553170	3	245,147,113,	0,787,1487,
#Partially deleted in new
chr10	63133246	63155031	chr10:63133246-63155031	1	+	63133415	63154218	0	3	254,41,1521,	0,18903,20264,
#Partially deleted in new
chr10	63133289	63155026	chr10:63133289-63155026	3	+	63133470	63154218	0	4	211,85,41,1516,	0,12919,18860,20221,
#Partially deleted in new
chr10	63167220	63465881	chr10:63167220-63465881	3	-	63168044	63465662	0	26	914,132,177,140,123,131,91,169,279,215,214,128,90,153,215,202,2207,173,1679,193,144,125,106,114,165,387,	0,1214,9076,10496,16226,17387,18342,18994,21947,23673,25717,26124,27065,30190,31292,33255,39374,41842,46252,48042,48332,49986,52657,97430,213097,298274,
#Partially deleted in new
chr10	63167220	63176555	chr10:63167220-63176555	0	-	63167220	63167220	8553170	3	914,132,259,	0,1214,9076,
#Partially deleted in new
chr10	63167220	63217711	chr10:63167220-63217711	1	-	63168044	63217711	789624	23	914,132,177,140,123,131,91,169,279,215,214,128,90,153,215,202,2207,173,1679,193,144,126,6,	0,1214,9076,10496,16226,17387,18342,18994,21947,23673,25717,26124,27065,30190,31292,33255,39374,41842,46252,48042,48332,49986,50485,
#Partially deleted in new
chr10	63167347	63269187	chr10:63167347-63269187	0	-	63167347	63167347	789624	22	762,132,177,140,123,131,91,169,279,215,160,128,90,153,215,2207,173,1679,193,144,125,525,	0,1087,8949,10369,16099,17260,18215,18867,21820,23546,25590,25997,26938,30063,31165,39247,41715,46125,47915,48205,49859,101315,
#Partially deleted in new
chr10	63167589	63269066	chr10:63167589-63269066	1	-	63168044	63219884	0	25	545,132,177,140,123,131,91,169,279,215,214,128,90,153,215,202,2207,173,1679,193,144,125,106,114,404,	0,845,8707,10127,15857,17018,17973,18625,21578,23304,25348,25755,26696,29821,30923,32886,39005,41473,45883,47673,47963,49617,52288,97061,101073,
#Partially deleted in new
chr10	63176799	63207725	chr10:63176799-63207725	0	-	63177710	63207725	789624	12	1057,123,131,91,169,279,215,214,128,90,153,1131,	0,6647,7808,8763,9415,12368,14094,16138,16545,17486,20611,29795,
#Partially deleted in new
chr10	63189286	63193337	chr10:63189286-63193337	0	-	63189286	63189286	8553170	3	160,215,400,	0,1607,3651,
#Deleted in new
chr10	63192938	63193649	chr10:63192938-63193649	0	-	63192938	63192938	8553170	2	213,305,	0,406,
#Partially deleted in new
chr10	63193109	63194694	chr10:63193109-63194694	0	-	63193109	63193109	8553170	2	363,409,	0,1176,
#Partially deleted in new
chr10	63215423	63268875	chr10:63215423-63268875	0	-	63215423	63215423	8553170	6	32,144,125,106,114,213,	0,129,1783,4454,49227,53239,
#Partially deleted in new
chr10	63215437	63269253	chr10:63215437-63269253	0	-	63215437	63215437	8553170	5	18,65,125,114,591,	0,115,1769,49213,53225,
#Partially deleted in new
chr10	63219876	63521850	chr10:63219876-63521850	0	-	63219876	63219876	8553170	4	107,114,165,113,	0,44774,160441,301861,
#Deleted in new
chr10	63222154	63223045	chr10:63222154-63223045	7	+	63222154	63222154	16724991	1	891,	0,
#Deleted in new
chr10	63358744	63359104	chr10:63358744-63359104	7	+	63358744	63358744	16724991	1	360,	0,
#Deleted in new
chr10	63372956	63373048	chr10:63372956-63373048	3	-	63372956	63372956	5263520	1	92,	0,
#Deleted in new
chr10	63427296	63427939	chr10:63427296-63427939	7	+	63427296	63427296	16724991	1	643,	0,
#Deleted in new
chr10	63465228	63466563	chr10:63465228-63466563	3	+	63465228	63465228	789624	1	1335,	0,
#Deleted in new
chr10	63489460	63489638	chr10:63489460-63489638	7	+	63489460	63489460	16724991	1	178,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	63521362	63625123	chr10:63521362-63625123	3	+	63521545	63620869	789624	8	215,73,77,121,114,148,146,4311,	0,44975,73415,76661,77807,88824,98292,99450,
#Partially deleted in new
chr10	63598045	63620822	chr10:63598045-63620822	0	+	63598045	63599711	789624	6	99,114,43,148,146,10,	0,1124,1624,12141,21609,22767,
#Deleted in new
chr10	63634316	63634827	chr10:63634316-63634827	7	-	63634316	63634316	16724991	1	511,	0,
#Deleted in new
chr10	63658073	63658521	chr10:63658073-63658521	7	+	63658073	63658073	16724991	1	448,	0,
#Partially deleted in new
chr10	63902450	63903245	chr10:63902450-63903245	7	-	63902450	63902450	16724991	1	795,	0,
#Deleted in new
chr10	64036344	64037280	chr10:64036344-64037280	3	-	64036344	64036344	8553170	2	474,148,	0,788,
#Deleted in new
chr10	64168958	64170850	chr10:64168958-64170850	7	-	64168958	64168958	16724991	1	1892,	0,
#Partially deleted in new
chr10	64620373	64620922	chr10:64620373-64620922	7	-	64620373	64620373	16724991	1	549,	0,
#Deleted in new
chr10	64762882	64763172	chr10:64762882-64763172	7	-	64762882	64762882	16724991	1	290,	0,
#Deleted in new
chr10	64825571	64826579	chr10:64825571-64826579	7	+	64825571	64825571	16724991	1	1008,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	64901135	64924518	chr10:64901135-64924518	3	-	64901135	64901135	789624	2	2290,282,	0,23101,
#Partially deleted in new
chr10	65054459	65055003	chr10:65054459-65055003	7	+	65054459	65054459	16724991	1	544,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	65123666	65141185	chr10:65123666-65141185	0	+	65123666	65123666	8553170	2	114,806,	0,16713,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	65134494	65141011	chr10:65134494-65141011	3	+	65134494	65134494	8553170	3	180,109,632,	0,4217,5885,
#Partially deleted in new
chr10	65169437	65169869	chr10:65169437-65169869	7	-	65169437	65169437	16724991	1	432,	0,
#Partially deleted in new
chr10	65248031	65248792	chr10:65248031-65248792	7	-	65248031	65248031	16724991	1	761,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	65271318	65315080	chr10:65271318-65315080	3	+	65271318	65271318	8553170	5	45,60,111,110,281,	0,14735,36042,37689,43481,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	65313784	65314970	chr10:65313784-65314970	0	+	65313784	65313784	8553170	3	44,92,171,	0,218,1015,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	65570337	65681466	chr10:65570337-65681466	1	+	65570337	65570337	8553170	7	208,155,122,83,138,126,507,	0,1087,2597,15147,15327,45298,110622,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	65615635	65766541	chr10:65615635-65766541	3	+	65615635	65615635	8553170	4	126,109,103,64,	0,73867,121261,150842,
#Partially deleted in new
chr10	65615725	65692187	chr10:65615725-65692187	0	+	65615725	65615725	8553170	3	36,109,487,	0,73777,75975,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	65615732	65638413	chr10:65615732-65638413	0	+	65615732	65615732	8553170	2	29,544,	0,22137,
#Partially deleted in new
chr10	65615732	65632828	chr10:65615732-65632828	0	+	65615732	65615732	8553170	2	29,749,	0,16347,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	65615732	65628903	chr10:65615732-65628903	0	+	65615732	65615732	8553170	2	29,891,	0,12280,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	65615732	65670836	chr10:65615732-65670836	0	+	65615732	65615732	8553170	2	29,752,	0,54352,
#Partially deleted in new
chr10	65615732	65660522	chr10:65615732-65660522	0	+	65615732	65615732	8553170	2	29,728,	0,44062,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	65615732	65768453	chr10:65615732-65768453	0	+	65615732	65615732	8553170	4	29,109,68,61,	0,73770,150823,152660,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	65615732	65768835	chr10:65615732-65768835	0	+	65615732	65615732	8553170	3	29,109,443,	0,73770,152660,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	65615732	65751248	chr10:65615732-65751248	0	+	65615732	65615732	8553170	3	29,109,421,	0,73770,135095,
#Deleted in new
chr10	65615733	65616189	chr10:65615733-65616189	0	+	65615733	65615733	8553170	1	456,	0,
#Partially deleted in new
chr10	65615736	65683232	chr10:65615736-65683232	0	+	65615736	65615736	8553170	2	25,1043,	0,66453,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	65615736	65698716	chr10:65615736-65698716	0	+	65615736	65615736	8553170	3	25,109,614,	0,73766,82366,
#Partially deleted in new
chr10	65912517	67696169	chr10:65912517-67696169	3	-	65920329	67647513	789624	18	8100,135,106,182,93,152,201,157,93,153,81,204,264,120,167,193,104,170,	0,54094,76174,156790,190639,367952,466634,608099,709174,853746,862926,1267799,1307089,1609324,1626985,1694339,1734897,1783482,
#Partially deleted in new
chr10	65920110	66079103	chr10:65920110-66079103	0	-	65920110	65920110	8553170	5	507,135,106,182,153,	0,46501,68581,149197,158840,
#Partially deleted in new
chr10	66079242	66118326	chr10:66079242-66118326	3	+	66079242	66079242	8553170	5	67,175,95,148,74,	0,5628,18721,19427,39010,
#Partially deleted in new
chr10	66766154	67180443	chr10:66766154-67180443	0	-	66766242	67180443	789624	3	262,81,127,	0,9289,414162,
#Deleted in new
chr10	66837456	66837704	chr10:66837456-66837704	7	+	66837456	66837456	16724991	1	248,	0,
#Partially deleted in new
chr10	66926005	67099830	chr10:66926005-67099830	3	+	66926583	67097796	789624	3	582,1532,2244,	0,915,171581,
#Partially deleted in new
chr10	67012289	67097929	chr10:67012289-67097929	0	+	67012289	67012289	8553170	3	63,43,343,	0,694,85297,
#Deleted in new
chr10	67012317	67015458	chr10:67012317-67015458	0	+	67012317	67012317	8553170	3	35,43,186,	0,666,2955,
#Deleted in new
chr10	67052608	67055028	chr10:67052608-67055028	3	+	67052608	67052608	8553170	2	92,413,	0,2007,
#Partially deleted in new
chr10	67176900	67219873	chr10:67176900-67219873	1	-	67176900	67219873	789624	3	84,204,267,	0,3416,42706,
#Deleted in new
chr10	67334122	67334882	chr10:67334122-67334882	7	+	67334122	67334122	16724991	1	760,	0,
#Deleted in new
chr10	67403350	67403410	chr10:67403350-67403410	3	-	67403350	67403350	5263520	1	60,	0,
#Partially deleted in new
chr10	67521841	67665652	chr10:67521841-67665652	0	-	67521841	67647513	789624	5	120,167,193,104,112,	0,17661,85015,125573,143699,
#Partially deleted in new
chr10	67750283	67751225	chr10:67750283-67751225	7	+	67750283	67750283	16724991	1	942,	0,
#Partially deleted in new
chr10	67793769	67794245	chr10:67793769-67794245	7	+	67793769	67793769	16724991	1	476,	0,
#Partially deleted in new
chr10	67796664	67838164	chr10:67796664-67838164	3	-	67797115	67838011	0	5	546,205,140,79,231,	0,8918,14859,26649,41269,
#Partially deleted in new
chr10	67797081	67838059	chr10:67797081-67838059	1	-	67797115	67838011	789624	6	129,205,140,90,79,126,	0,8501,14442,18958,26232,40852,
#Partially deleted in new
chr10	67805586	67838063	chr10:67805586-67838063	0	-	67816116	67838011	789624	5	201,140,94,79,130,	0,5937,10453,17727,32347,
#Deleted in new
chr10	67808501	67808608	chr10:67808501-67808608	3	+	67808501	67808501	8553170	1	107,	0,
#Partially deleted in new
chr10	67810841	67838096	chr10:67810841-67838096	1	-	67811496	67838011	0	3	822,79,163,	0,12472,27092,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	67825309	67825600	chr10:67825309-67825600	3	-	67825309	67825309	8553170	1	291,	0,
#Deleted in new
chr10	67833762	67834081	chr10:67833762-67834081	7	+	67833762	67833762	16724991	1	319,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	67849524	67850746	chr10:67849524-67850746	3	+	67849524	67849524	8553170	1	1222,	0,
#Deleted in new
chr10	67858817	67858871	chr10:67858817-67858871	3	-	67858817	67858817	8553170	1	54,	0,
#Deleted in new
chr10	67874331	67874911	chr10:67874331-67874911	7	+	67874331	67874331	16724991	1	580,	0,
#Partially deleted in new
chr10	67884668	67918390	chr10:67884668-67918390	3	+	67884721	67916593	0	9	483,117,242,153,148,80,187,558,2126,	0,2748,4213,6733,22121,23377,24587,27805,31596,
#Partially deleted in new
chr10	67885180	67918389	chr10:67885180-67918389	1	+	67891497	67916593	789624	8	219,117,153,148,80,187,558,2125,	0,2236,6221,21609,22865,24075,27293,31084,
#Partially deleted in new
chr10	67885180	67891496	chr10:67885180-67891496	0	+	67885180	67885180	8553170	4	219,117,242,95,	0,2236,3701,6221,
#Partially deleted in new
chr10	67885183	67906879	chr10:67885183-67906879	0	+	67885183	67885183	8553170	4	216,117,153,90,	0,2233,6218,21606,
#Partially deleted in new
chr10	67891483	67918390	chr10:67891483-67918390	1	+	67906254	67916593	789624	7	71,125,148,80,187,558,2126,	0,14679,15306,16562,17772,20990,24781,
#Partially deleted in new
chr10	67906049	67918386	chr10:67906049-67918386	1	+	67906254	67916593	789624	6	238,148,80,187,558,2122,	0,740,1996,3206,6424,10215,
#Partially deleted in new
chr10	67921898	68039967	chr10:67921898-68039967	1	-	67922930	68039472	789624	23	1241,103,184,83,67,167,144,168,99,24,120,173,190,112,60,125,77,161,131,92,222,77,551,	0,3186,10698,14254,17689,19040,32696,33064,34979,37214,44784,66764,68312,69005,69241,70300,70707,92127,103647,110879,112066,116194,117518,
#Partially deleted in new
chr10	67921907	68075283	chr10:67921907-68075283	1	-	67922930	68073108	789624	26	1232,103,184,83,67,167,144,168,99,24,120,173,190,112,60,125,77,161,131,92,222,77,160,304,30,140,	0,3177,10689,14245,17680,19031,32687,33055,34970,37205,44775,66755,68303,68996,69232,70291,70698,92118,103638,110870,112057,116185,122496,150975,151749,153236,
#Partially deleted in new
chr10	67921907	68075283	chr10:67921907-68075283	1	-	67922930	68073108	789624	24	1232,103,184,83,144,168,99,24,120,173,190,112,60,125,77,161,131,92,222,77,160,304,30,140,	0,3177,10689,14245,32687,33055,34970,37205,44775,66755,68303,68996,69232,70291,70698,92118,103638,110870,112057,116185,122496,150975,151749,153236,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr10	67922483	68073097	chr10:67922483-68073097	0	-	67995245	68073097	789624	25	656,103,184,83,67,167,144,168,99,120,102,173,190,112,60,125,2687,93,161,131,92,222,77,160,215,	0,2601,10113,13669,17104,18455,32111,32479,34394,44199,65559,66179,67727,68420,68656,69715,70122,73562,91542,103062,110294,111481,115609,121920,150399,
#Partially deleted in new
chr10	67922483	68075283	chr10:67922483-68075283	0	-	68034135	68073108	789624	23	656,103,184,83,67,167,144,168,99,120,173,190,112,60,125,77,161,131,222,77,304,30,140,	0,2601,10113,13669,17104,18455,32111,32479,34394,44199,66179,67727,68420,68656,69715,70122,91542,103062,111481,115609,150399,151173,152660,
#Partially deleted in new
chr10	67922488	68075348	chr10:67922488-68075348	3	-	67922930	68073108	789624	25	651,103,184,83,67,167,144,168,99,120,173,190,112,60,125,77,161,131,92,222,77,160,304,30,205,	0,2596,10108,13664,17099,18450,32106,32474,34389,44194,66174,67722,68415,68651,69710,70117,91537,103057,110289,111476,115604,121915,150394,151168,152655,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	67954199	67956861	chr10:67954199-67956861	0	-	67954199	67954199	8553170	2	539,1899,	0,763,
#Partially deleted in new
chr10	67960701	67961464	chr10:67960701-67961464	7	-	67960701	67960701	16724991	1	763,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	67964791	67990241	chr10:67964791-67990241	0	-	67964791	67964791	8553170	3	2011,173,31,	0,23871,25419,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	68007717	68008017	chr10:68007717-68008017	3	-	68007717	68007717	8553170	1	300,	0,
#Partially deleted in new
chr10	68010204	68010862	chr10:68010204-68010862	7	-	68010204	68010204	16724991	1	658,	0,
#Partially deleted in new
chr10	68032818	68038365	chr10:68032818-68038365	0	-	68032818	68032818	8553170	3	51,222,273,	0,1146,5274,
#Partially deleted in new
chr10	68033999	68075257	chr10:68033999-68075257	0	-	68033999	68073108	789624	7	187,77,72,160,304,30,114,	0,4093,5417,10404,38883,39657,41144,
#Partially deleted in new
chr10	68067084	68075301	chr10:68067084-68075301	0	-	68067084	68067084	8553170	4	133,304,30,158,	0,5798,6572,8059,
#Partially deleted in new
chr10	68067181	68074857	chr10:68067181-68074857	0	-	68067181	68067181	8553170	4	36,304,30,208,	0,5701,6475,7468,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	68067688	68075283	chr10:68067688-68075283	1	-	68070492	68073108	789624	4	2911,304,30,140,	0,5194,5968,7455,
#Partially deleted in new
chr10	68073020	68074137	chr10:68073020-68074137	0	-	68073020	68073108	789624	3	166,30,344,	0,636,773,
#Partially deleted in new
chr10	68073134	68074193	chr10:68073134-68074193	0	-	68073134	68073134	8553170	2	52,537,	0,522,
#Partially deleted in new
chr10	68106116	68212012	chr10:68106116-68212012	3	+	68121438	68210455	789624	21	67,119,903,176,52,115,72,142,24,117,373,591,139,222,150,83,127,208,166,134,1727,	0,3488,15321,36823,39358,42236,43923,52369,55612,59585,60177,67949,69206,82788,88246,89333,91235,93251,95712,100653,104169,
#Partially deleted in new
chr10	68106154	68211699	chr10:68106154-68211699	1	+	68106724	68210455	789624	20	29,262,176,52,115,72,142,24,117,373,591,139,222,150,83,127,208,166,134,1414,	0,385,36785,39320,42198,43885,52331,55574,59547,60139,67911,69168,82750,88208,89295,91197,93213,95674,100615,104131,
#Partially deleted in new
chr10	68109236	68212017	chr10:68109236-68212017	1	+	68121438	68210455	789624	20	487,903,176,52,115,72,142,24,117,373,591,139,222,150,83,127,208,166,134,1732,	0,12201,33703,36238,39116,40803,49249,52492,56465,57057,64829,66086,79668,85126,86213,88115,90131,92592,97533,101049,
#Partially deleted in new
chr10	68109432	68212012	chr10:68109432-68212012	1	+	68136711	68210455	789624	24	291,64,903,54,54,132,176,52,115,72,142,24,117,373,591,139,222,150,83,127,208,166,134,1727,	0,4800,12005,26026,26777,27167,33507,36042,38920,40607,49053,52296,56269,56861,64633,65890,79472,84930,86017,87919,89935,92396,97337,100853,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	68109495	68162166	chr10:68109495-68162166	1	+	68121438	68161793	789624	8	228,903,176,52,115,72,142,438,	0,11942,33444,35979,38857,40544,48990,52233,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	68158078	68158408	chr10:68158078-68158408	3	+	68158078	68158078	8553170	1	330,	0,
#Deleted in new
chr10	68230623	68232103	chr10:68230623-68232103	3	-	68231218	68231677	789624	1	1480,	0,
#Partially deleted in new
chr10	68233250	68242379	chr10:68233250-68242379	3	-	68233250	68233250	8553170	3	323,82,60,	0,4299,9069,
#Partially deleted in new
chr10	68233252	68235433	chr10:68233252-68235433	0	-	68233252	68233252	8553170	2	321,96,	0,2085,
#Deleted in new
chr10	68260556	68261499	chr10:68260556-68261499	7	+	68260556	68260556	16724991	1	943,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	68282659	68297134	chr10:68282659-68297134	1	-	68284176	68296970	789624	8	1630,63,179,89,30,110,99,249,	0,2688,5823,6271,9350,9469,13606,14226,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	68282659	68332927	chr10:68282659-68332927	3	-	68284176	68306844	789624	10	1630,63,179,89,30,110,99,100,143,144,	0,2688,5823,6271,9350,9469,13606,14226,24101,50124,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	68283063	68332906	chr10:68283063-68332906	1	-	68284176	68306844	789624	10	1226,63,179,89,30,110,99,100,146,123,	0,2284,5419,5867,8946,9065,13202,13822,23697,49720,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	68283063	68288963	chr10:68283063-68288963	0	-	68283231	68288963	789624	3	227,179,33,	0,5419,5867,
#Partially deleted in new
chr10	68285080	68333049	chr10:68285080-68333049	1	-	68285258	68306844	789624	9	330,179,89,30,110,99,100,146,266,	0,3402,3850,6929,7048,11185,11805,21680,47703,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	68287026	68306879	chr10:68287026-68306879	0	-	68287026	68287026	8553170	5	1993,30,110,100,119,	0,4983,5102,9859,19734,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	68295946	68306829	chr10:68295946-68306829	0	-	68295946	68295946	8553170	3	418,100,69,	0,939,10814,
#Partially deleted in new
chr10	68331173	68342273	chr10:68331173-68342273	0	+	68331173	68331173	8553170	8	1043,1489,87,116,136,96,93,296,	0,6025,7966,8266,10000,10411,10585,10804,
#Deleted in new
chr10	68331720	68339546	chr10:68331720-68339546	0	+	68331720	68331720	8553170	5	134,135,185,87,107,	0,5478,6782,7419,7719,
#Partially deleted in new
chr10	68332074	68343187	chr10:68332074-68343187	3	+	68337221	68342054	789624	10	142,135,139,185,87,116,136,96,93,1210,	0,5124,5783,6428,7065,7365,9099,9510,9684,9903,
#Partially deleted in new
chr10	68332075	68341287	chr10:68332075-68341287	0	+	68332075	68332075	8553170	6	160,135,140,87,116,114,	0,5123,6427,7064,7364,9098,
#Deleted in new
chr10	68332102	68339201	chr10:68332102-68339201	0	+	68332102	68332102	8553170	5	114,135,139,185,62,	0,5096,5755,6400,7037,
#Deleted in new
chr10	68332116	68338675	chr10:68332116-68338675	0	+	68332116	68332116	8553170	4	119,135,139,173,	0,5082,5741,6386,
#Partially deleted in new
chr10	68332121	68342272	chr10:68332121-68342272	1	+	68337221	68342054	789624	10	95,135,139,140,87,116,136,96,93,295,	0,5077,5736,6381,7018,7318,9052,9463,9637,9856,
#Partially deleted in new
chr10	68336805	68342271	chr10:68336805-68342271	0	+	68336805	68336805	8553170	7	1882,87,116,136,96,93,294,	0,2334,2634,4368,4779,4953,5172,
#Partially deleted in new
chr10	68337615	68343191	chr10:68337615-68343191	0	+	68337615	68337615	8553170	8	381,185,87,116,136,96,93,1214,	0,887,1524,1824,3558,3969,4143,4362,
#Partially deleted in new
chr10	68338339	68342269	chr10:68338339-68342269	0	+	68338339	68338339	8553170	5	348,87,116,678,292,	0,800,1100,2834,3638,
#Partially deleted in new
chr10	68338805	68342269	chr10:68338805-68342269	0	+	68338805	68338805	8553170	4	421,116,678,292,	0,634,2368,3172,
#Partially deleted in new
chr10	68341106	68406950	chr10:68341106-68406950	0	-	68345767	68406950	789624	19	182,210,78,49,95,130,120,98,168,117,102,70,66,62,124,102,118,174,45,	0,4595,4900,14246,22483,22877,35746,38317,40125,42691,42944,44952,52031,52968,53221,55673,60513,63564,65799,
#Partially deleted in new
chr10	68341129	68376946	chr10:68341129-68376946	0	-	68341129	68341129	8553170	7	159,81,78,49,95,130,94,	0,4701,4877,14223,22460,22854,35723,
#Partially deleted in new
chr10	68341152	68364030	chr10:68341152-68364030	0	-	68341165	68364030	789624	5	136,78,49,95,47,	0,4854,14200,22437,22831,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	68343405	68346724	chr10:68343405-68346724	0	-	68343405	68343405	8553170	2	2506,718,	0,2601,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr10	68343518	68407189	chr10:68343518-68407189	1	-	68345767	68406862	789624	18	2393,78,49,95,130,120,98,168,117,102,70,66,62,124,102,118,174,436,	0,2488,11834,20071,20465,33334,35905,37713,40279,40532,42540,49619,50556,50809,53261,58101,61152,63235,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr10	68343826	68407290	chr10:68343826-68407290	3	-	68345767	68407189	789624	18	2085,78,49,95,130,120,98,168,117,102,70,66,62,124,102,118,174,105,	0,2180,11526,19763,20157,33026,35597,37405,39971,40224,42232,49311,50248,50501,52953,57793,60844,63359,
#Partially deleted in new
chr10	68345144	68377766	chr10:68345144-68377766	0	-	68345144	68345144	8553170	6	767,78,49,95,130,914,	0,862,10208,18445,18839,31708,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	68345732	68355698	chr10:68345732-68355698	0	-	68345732	68345732	8553170	3	179,78,346,	0,274,9620,
#Partially deleted in new
chr10	68377192	68407265	chr10:68377192-68407265	1	-	68378561	68407189	789624	12	1478,98,168,117,102,70,66,62,124,118,174,80,	0,2231,4039,6605,6858,8866,15945,16882,17135,24427,27478,29993,
#Partially deleted in new
chr10	68377193	68407294	chr10:68377193-68407294	1	-	68378561	68407189	789624	12	1477,98,168,117,102,70,66,62,124,102,118,109,	0,2230,4038,6604,6857,8865,15944,16881,17134,19586,24426,29992,
#Partially deleted in new
chr10	68379134	68381256	chr10:68379134-68381256	0	-	68379134	68379134	8553170	2	387,25,	0,2097,
#Partially deleted in new
chr10	68379492	68407236	chr10:68379492-68407236	0	-	68379492	68379492	8553170	11	29,168,117,102,66,62,124,102,118,174,51,	0,1739,4305,4558,13645,14582,14835,17287,22127,25178,27693,
#Partially deleted in new
chr10	68393763	68407277	chr10:68393763-68407277	0	-	68393763	68393763	8553170	6	373,124,102,118,174,92,	0,564,3016,7856,10907,13422,
#Partially deleted in new
chr10	68414063	68471886	chr10:68414063-68471886	1	-	68414905	68471864	789624	17	1044,149,180,90,110,110,117,231,195,163,118,220,132,146,184,183,96,	0,2643,4970,5739,17798,18142,18330,22947,28853,30857,32232,35964,45040,51603,54059,55917,57727,
#Partially deleted in new
chr10	68414064	68471915	chr10:68414064-68471915	3	-	68415038	68471864	0	21	1043,147,180,90,205,90,194,225,110,110,117,231,195,163,118,220,132,146,184,183,125,	0,2644,4969,5738,8160,8450,8632,16371,17797,18141,18329,22946,28852,30856,32231,35963,45039,51602,54058,55916,57726,
#Partially deleted in new
chr10	68414988	68472121	chr10:68414988-68472121	0	-	68430464	68471864	0	22	119,147,180,90,205,90,194,105,115,110,117,231,195,163,118,220,132,146,184,183,95,68,	0,1720,4045,4814,7236,7526,7708,15447,16868,17217,17405,22022,27928,29932,31307,35039,44115,50678,53134,54992,56802,57065,
#Partially deleted in new
chr10	68414988	68472121	chr10:68414988-68472121	1	-	68430464	68471864	0	22	117,149,180,90,205,90,194,105,115,110,117,231,195,163,118,220,132,146,184,183,95,68,	0,1718,4045,4814,7236,7526,7708,15447,16868,17217,17405,22022,27928,29932,31307,35039,44115,50678,53134,54992,56802,57065,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	68416614	68430607	chr10:68416614-68430607	0	-	68416660	68430607	789624	7	241,180,90,205,90,194,172,	0,2419,3188,5610,5900,6082,13821,
#Partially deleted in new
chr10	68416685	68419423	chr10:68416685-68419423	0	-	68416685	68416685	8553170	2	170,390,	0,2348,
#Deleted in new
chr10	68424559	68424997	chr10:68424559-68424997	7	+	68424559	68424559	16724991	1	438,	0,
#Partially deleted in new
chr10	68436853	68443006	chr10:68436853-68443006	0	-	68436853	68436853	8553170	2	388,90,	0,6063,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	68461406	68461525	chr10:68461406-68461525	7	+	68461406	68461406	16724991	1	119,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	68468166	68471886	chr10:68468166-68471886	0	-	68470566	68471864	789624	4	140,183,124,96,	0,1814,2322,3624,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	68477998	68480764	chr10:68477998-68480764	0	-	68477998	68477998	8553170	2	805,974,	0,1792,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	68478000	68527474	chr10:68478000-68527474	3	-	68483431	68527375	789624	9	5588,69,163,67,122,64,134,93,229,	0,9143,10466,15131,15448,25631,28584,38750,49245,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	68483018	68518218	chr10:68483018-68518218	0	-	68483018	68483018	789624	8	570,69,163,67,64,134,93,1135,	0,4125,5448,10113,20613,23566,33732,34065,
#Partially deleted in new
chr10	68483474	68527438	chr10:68483474-68527438	0	-	68517141	68527375	789624	10	114,69,163,67,122,64,134,93,102,193,	0,3669,4992,9657,9974,20157,23110,33276,33609,43771,
#Partially deleted in new
chr10	68487073	68488590	chr10:68487073-68488590	0	-	68487139	68488590	789624	2	139,124,	0,1393,
#Partially deleted in new
chr10	68493173	68506605	chr10:68493173-68506605	0	-	68493536	68506605	789624	5	25,122,79,64,21,	0,275,3260,10458,13411,
#Deleted in new
chr10	68499531	68499968	chr10:68499531-68499968	7	+	68499531	68499531	16724991	1	437,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	68503151	68503259	chr10:68503151-68503259	3	+	68503151	68503151	8553170	1	108,	0,
#Partially deleted in new
chr10	68506626	68527416	chr10:68506626-68527416	0	-	68517116	68527375	789624	4	92,93,182,171,	0,10124,10457,20619,
#Partially deleted in new
chr10	68544488	68544833	chr10:68544488-68544833	7	-	68544488	68544488	16724991	1	345,	0,
#Partially deleted in new
chr10	68560655	68694482	chr10:68560655-68694482	3	+	68572338	68691814	0	12	87,2036,54,2308,91,94,212,151,90,138,352,3675,	0,11561,40325,84042,91190,91845,106389,112239,120743,122180,125700,130152,
#Partially deleted in new
chr10	68632370	68632727	chr10:68632370-68632727	7	+	68632370	68632370	16724991	1	357,	0,
#Deleted in new
chr10	68674355	68675100	chr10:68674355-68675100	7	+	68674355	68674355	16724991	1	745,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	68698499	68700794	chr10:68698499-68700794	3	+	68698499	68698499	8553170	1	2295,	0,
#Partially deleted in new
chr10	68717310	68717795	chr10:68717310-68717795	7	-	68717310	68717310	16724991	2	190,60,	0,425,
#Partially deleted in new
chr10	68721011	68742408	chr10:68721011-68742408	0	+	68722504	68742408	789624	6	145,123,173,45,33,33,	0,1443,15864,16833,19617,21364,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr10	68721143	68792375	chr10:68721143-68792375	1	+	68722504	68757375	789624	24	139,123,173,45,33,194,115,193,130,162,226,114,167,84,186,192,240,112,83,147,121,186,206,1169,	0,1311,15732,16701,19485,21232,26017,26230,27992,28380,32708,33570,34226,36150,39863,44744,50062,51844,64992,65402,66783,66999,68566,70063,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr10	68721213	68792377	chr10:68721213-68792377	3	+	68722504	68791266	789624	25	69,123,173,45,33,194,115,193,130,162,226,114,167,211,84,186,192,240,112,83,147,121,186,206,1171,	0,1241,15662,16631,19415,21162,25947,26160,27922,28310,32638,33500,34156,35059,36080,39793,44674,49992,51774,64922,65332,66713,66929,68496,69993,
#Partially deleted in new
chr10	68721215	68742564	chr10:68721215-68742564	0	+	68722504	68742564	789624	6	191,123,173,45,33,189,	0,1239,15660,16629,19413,21160,
#Partially deleted in new
chr10	68721225	68791266	chr10:68721225-68791266	1	+	68722504	68791266	789624	24	63,123,173,33,194,115,193,130,162,226,114,167,211,84,186,192,240,112,83,147,121,186,206,60,	0,1229,15650,19403,21150,25935,26148,27910,28298,32626,33488,34144,35047,36068,39781,44662,49980,51762,64910,65320,66701,66917,68484,69981,
#Partially deleted in new
chr10	68721226	68771444	chr10:68721226-68771444	0	+	68722504	68757375	789624	17	56,123,173,45,33,194,115,193,130,162,226,114,167,84,186,192,239,	0,1228,15649,16618,19402,21149,25934,26147,27909,28297,32625,33487,34143,36067,39780,44661,49979,
#Partially deleted in new
chr10	68721238	68788316	chr10:68721238-68788316	0	+	68722504	68788316	789624	22	44,123,173,33,194,115,193,130,162,226,114,167,211,84,186,192,240,112,83,147,121,174,	0,1216,15637,19390,21137,25922,26135,27897,28285,32613,33475,34131,35034,36055,39768,44649,49967,51749,64897,65307,66688,66904,
#Partially deleted in new
chr10	68721238	68771418	chr10:68721238-68771418	0	+	68722504	68742436	789624	16	44,123,173,142,115,193,130,162,226,114,167,211,84,186,192,213,	0,1216,15637,21189,25922,26135,27897,28285,32613,33475,34131,35034,36055,39768,44649,49967,
#Partially deleted in new
chr10	68721241	68771431	chr10:68721241-68771431	0	+	68747227	68771431	789624	16	41,173,33,194,115,193,130,162,226,114,167,211,84,186,192,226,	0,15634,19387,21134,25919,26132,27894,28282,32610,33472,34128,35031,36052,39765,44646,49964,
#Partially deleted in new
chr10	68721241	68771301	chr10:68721241-68771301	0	+	68722504	68771301	789624	16	41,123,173,194,115,193,130,162,226,114,167,211,84,186,192,96,	0,1213,15634,21134,25919,26132,27894,28282,32610,33472,34128,35031,36052,39765,44646,49964,
#Partially deleted in new
chr10	68721251	68736910	chr10:68721251-68736910	0	+	68721536	68736910	789624	3	412,123,35,	0,1203,15624,
#Partially deleted in new
chr10	68721254	68791355	chr10:68721254-68791355	0	+	68722504	68757375	789624	24	34,123,173,45,33,194,115,193,130,162,226,114,167,84,186,192,240,112,83,147,121,186,206,149,	0,1200,15621,16590,19374,21121,25906,26119,27881,28269,32597,33459,34115,36039,39752,44633,49951,51733,64881,65291,66672,66888,68455,69952,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	68735719	68735823	chr10:68735719-68735823	3	-	68735719	68735719	8553170	1	104,	0,
#Deleted in new
chr10	68755171	68755238	chr10:68755171-68755238	3	+	68755171	68755171	789624	1	67,	0,
#Deleted in new
chr10	68755181	68757298	chr10:68755181-68757298	0	+	68755181	68755181	8553170	4	104,167,211,5,	0,188,1091,2112,
#Partially deleted in new
chr10	68755475	68765927	chr10:68755475-68765927	0	+	68755475	68756610	789624	5	61,107,84,186,40,	0,1050,1818,5531,10412,
#Partially deleted in new
chr10	68757349	68788047	chr10:68757349-68788047	0	+	68757349	68788047	789624	7	28,186,192,112,83,147,121,	0,3657,8538,15638,28786,29196,30577,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	68760809	68771331	chr10:68760809-68771331	0	+	68760809	68760809	8553170	3	383,192,126,	0,5078,10396,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	68773058	68786986	chr10:68773058-68786986	0	+	68773058	68773058	8553170	3	41,83,441,	0,13077,13487,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	68787835	68789872	chr10:68787835-68789872	0	+	68787835	68787835	8553170	3	212,186,163,	0,307,1874,
#Partially deleted in new
chr10	68827540	68893060	chr10:68827540-68893060	1	+	68827623	68892736	789624	4	393,153,2359,472,	0,54417,56719,65048,
#Partially deleted in new
chr10	68827540	68895432	chr10:68827540-68895432	3	+	68827623	68892736	789624	5	393,153,2359,185,191,	0,54417,56719,65048,67701,
#Partially deleted in new
chr10	68827623	68893060	chr10:68827623-68893060	1	+	68827623	68892635	789624	3	310,153,472,	0,54334,64965,
#Partially deleted in new
chr10	68827623	68893060	chr10:68827623-68893060	1	+	68827623	68892609	789624	4	310,153,200,472,	0,54334,56636,64965,
#Partially deleted in new
chr10	68827623	68893060	chr10:68827623-68893060	1	+	68827623	68892736	789624	4	646,153,2359,472,	0,54334,56636,64965,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	68846804	68846911	chr10:68846804-68846911	3	+	68846804	68846804	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	68896919	68900768	chr10:68896919-68900768	3	+	68896919	68896919	8553170	2	637,1143,	0,2706,
#Partially deleted in new
chr10	68901277	68946847	chr10:68901277-68946847	3	+	68901384	68946630	0	15	194,297,76,179,118,186,146,150,162,120,74,160,135,45,496,	0,5433,9029,9790,11884,12113,12781,18554,32921,33521,34728,35658,39782,41935,45074,
#Partially deleted in new
chr10	68901285	68913506	chr10:68901285-68913506	0	+	68901384	68906316	789624	7	186,54,297,76,179,118,157,	0,4998,5425,9021,9782,11876,12064,
#Partially deleted in new
chr10	68901288	68946847	chr10:68901288-68946847	1	+	68901384	68946626	789624	23	138,44,100,195,76,179,118,186,146,150,162,120,74,28,24,102,36,15,72,5,46,255,239,	0,139,5422,5524,9018,9779,11873,12102,12770,18543,32910,33510,34717,35647,35679,35705,39771,39808,39828,39901,41923,45063,45320,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	68901316	68913230	chr10:68901316-68913230	0	+	68901384	68906294	789624	6	155,112,297,76,179,69,	0,4909,5394,8990,9751,11845,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	68911652	68911759	chr10:68911652-68911759	3	-	68911652	68911652	8553170	1	107,	0,
#Partially deleted in new
chr10	68913426	68934883	chr10:68913426-68934883	0	+	68913426	68913426	8553170	4	150,146,150,85,	0,632,6405,21372,
#Partially deleted in new
chr10	68919853	68946553	chr10:68919853-68946553	0	+	68919853	68919853	8553170	6	128,74,160,135,45,202,	0,16152,17082,21206,23359,26498,
#Partially deleted in new
chr10	68956127	68985073	chr10:68956127-68985073	3	+	68956225	68982812	0	15	185,444,76,179,118,186,146,150,162,120,74,160,135,45,2531,	0,3678,5954,7163,9249,10890,12848,14073,15763,17417,18542,21401,22714,25409,26415,
#Partially deleted in new
chr10	68956439	68985067	chr10:68956439-68985067	1	+	68959922	68982812	0	15	309,444,76,179,118,186,146,150,162,120,74,160,135,45,2525,	0,3366,5642,6851,8937,10578,12536,13761,15451,17105,18230,21089,22402,25097,26103,
#Partially deleted in new
chr10	68988720	69016982	chr10:68988720-69016982	3	+	68988832	69016416	789624	7	538,99,80,184,85,116,1442,	0,11703,16325,17011,20120,22179,26820,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	68988720	69016946	chr10:68988720-69016946	0	+	68988832	69000424	789624	8	538,143,99,80,184,85,116,1406,	0,996,11703,16325,17011,20120,22179,26820,
#Partially deleted in new
chr10	68988795	69016930	chr10:68988795-69016930	0	+	68988832	69007641	789624	8	463,99,80,184,125,85,116,1390,	0,11628,16250,16936,18831,20045,22104,26745,
#Partially deleted in new
chr10	68988805	69016976	chr10:68988805-69016976	1	+	68988832	69015560	789624	6	453,99,80,184,85,1436,	0,11618,16240,16926,20035,26735,
#Partially deleted in new
chr10	68988937	69016960	chr10:68988937-69016960	0	+	68988937	69000428	789624	8	275,26,99,80,184,85,116,1420,	0,779,11486,16108,16794,19903,21962,26603,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	68988943	69043526	chr10:68988943-69043526	0	+	68988943	69041713	789624	8	315,99,80,184,85,116,443,1385,	0,11480,16102,16788,19897,21956,52620,53198,
#Partially deleted in new
chr10	68989015	69016914	chr10:68989015-69016914	0	+	68989015	69006865	789624	8	243,99,80,184,88,85,116,1374,	0,11408,16030,16716,17826,19825,21884,26525,
#Partially deleted in new
chr10	68989116	69005986	chr10:68989116-69005986	0	+	68989116	68989116	8553170	4	142,99,80,255,	0,11307,15929,16615,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	68989119	69016902	chr10:68989119-69016902	0	+	68989119	68999747	789624	8	139,100,99,80,184,85,116,1362,	0,10595,11304,15926,16612,19721,21780,26421,
#Partially deleted in new
chr10	68989135	69016946	chr10:68989135-69016946	0	+	68989135	69006865	789624	9	123,99,80,184,88,85,116,79,1406,	0,11288,15910,16596,17706,19705,21764,26222,26405,
#Partially deleted in new
chr10	68989480	69016918	chr10:68989480-69016918	0	+	68989480	68989480	8553170	7	149,99,80,184,85,116,1378,	0,10943,15565,16251,19360,21419,26060,
#Deleted in new
chr10	68991136	68991707	chr10:68991136-68991707	7	+	68991136	68991136	16724991	1	571,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	69005817	69043544	chr10:69005817-69043544	0	+	69005817	69041713	789624	2	98,1981,	0,35746,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	69007654	69011300	chr10:69007654-69011300	0	+	69007654	69007654	8553170	4	97,85,116,99,	0,1186,3245,3547,
#Deleted in new
chr10	69022777	69023866	chr10:69022777-69023866	7	+	69022777	69022777	16724991	1	1089,	0,
#Partially deleted in new
chr10	69088105	69104541	chr10:69088105-69104541	0	+	69088105	69088105	8553170	2	131,671,	0,15765,
#Partially deleted in new
chr10	69088117	69104811	chr10:69088117-69104811	3	+	69088157	69104120	789624	3	119,148,941,	0,8966,15753,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	69098495	69098794	chr10:69098495-69098794	3	+	69098495	69098495	8553170	1	299,	0,
#Partially deleted in new
chr10	69123511	69172861	chr10:69123511-69172861	3	+	69124277	69171269	0	10	35,621,150,76,157,165,107,69,143,1706,	0,148,9386,32300,33495,34535,38894,42530,44977,47644,
#Partially deleted in new
chr10	69124151	69172856	chr10:69124151-69172856	1	+	69124277	69171269	0	9	129,150,76,157,165,107,69,143,1701,	0,8746,31660,32855,33895,38254,41890,44337,47004,
#Partially deleted in new
chr10	69124151	69172856	chr10:69124151-69172856	1	+	69124277	69171184	0	8	129,150,76,157,165,107,69,1701,	0,8746,31660,32855,33895,38254,41890,47004,
#Partially deleted in new
chr10	69124155	69168532	chr10:69124155-69168532	0	+	69124277	69157045	789624	7	125,150,157,165,107,69,44,	0,8742,32851,33891,38250,41886,44333,
#Partially deleted in new
chr10	69124185	69158180	chr10:69124185-69158180	0	+	69124185	69124185	8553170	4	95,76,157,134,	0,31626,32821,33861,
#Partially deleted in new
chr10	69124211	69171260	chr10:69124211-69171260	0	+	69124211	69124211	8553170	7	69,150,157,107,69,143,105,	0,8686,32795,38194,41830,44277,46944,
#Partially deleted in new
chr10	69124245	69168628	chr10:69124245-69168628	0	+	69124245	69124245	8553170	6	35,150,165,107,69,140,	0,8652,33801,38160,41796,44243,
#Partially deleted in new
chr10	69132897	69171359	chr10:69132897-69171359	1	+	69132969	69171184	789624	7	150,76,157,165,107,69,204,	0,22914,24109,25149,29508,33144,38258,
#Deleted in new
chr10	69161529	69161906	chr10:69161529-69161906	7	-	69161529	69161529	16724991	1	377,	0,
#Deleted in new
chr10	69170033	69171277	chr10:69170033-69171277	0	+	69170033	69170033	8553170	2	336,122,	0,1122,
#Partially deleted in new
chr10	69180231	69209098	chr10:69180231-69209098	3	+	69180291	69209035	0	15	331,78,108,115,169,112,78,92,181,94,220,81,177,149,499,	0,5755,6211,7410,9035,11423,14956,16760,18140,18872,20048,22207,22635,27561,28368,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	69180249	69193263	chr10:69180249-69193263	0	+	69180249	69180249	8553170	6	313,78,108,115,169,1609,	0,5737,6193,7392,9017,11405,
#Partially deleted in new
chr10	69180280	69195213	chr10:69180280-69195213	0	+	69180280	69180280	8553170	8	282,135,78,108,115,169,112,26,	0,2239,5706,6162,7361,8986,11374,14907,
#Partially deleted in new
chr10	69180287	69200353	chr10:69180287-69200353	0	+	69180291	69200353	789624	6	275,78,92,181,94,74,	0,14900,16704,18084,18816,19992,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	69187432	69197080	chr10:69187432-69197080	0	+	69187432	69187432	8553170	6	34,115,169,112,78,89,	0,209,1834,4222,7755,9559,
#Partially deleted in new
chr10	69187712	69195380	chr10:69187712-69195380	0	+	69187712	69187712	8553170	4	44,169,112,193,	0,1554,3942,7475,
#Partially deleted in new
chr10	69207775	69209099	chr10:69207775-69209099	0	+	69207775	69207775	8553170	2	166,500,	0,824,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	69215332	69232490	chr10:69215332-69232490	3	-	69215332	69215332	789624	5	1440,149,59,165,120,	0,7544,7834,10489,17038,
#Partially deleted in new
chr10	69220302	69267559	chr10:69220302-69267559	3	+	69220435	69266757	789624	18	196,163,149,120,96,100,184,156,234,305,146,120,96,100,184,156,234,950,	0,6904,12461,12711,18739,20349,22879,25776,27057,28121,29987,30230,36733,37024,38473,40836,45282,46307,
#Deleted in new
chr10	69247509	69248955	chr10:69247509-69248955	0	+	69247509	69247509	8553170	2	84,532,	0,914,
#Partially deleted in new
chr10	69258870	69261637	chr10:69258870-69261637	0	+	69258870	69258870	8553170	2	89,499,	0,2268,
#Partially deleted in new
chr10	69265341	69268148	chr10:69265341-69268148	3	-	69265341	69265341	8553170	2	386,48,	0,2759,
#Partially deleted in new
chr10	69269983	69401884	chr10:69269983-69401884	1	+	69288743	69401135	0	21	125,122,100,48,163,149,120,96,100,184,156,234,305,149,120,96,100,184,156,234,894,	0,12545,18687,25649,73843,89913,94799,98552,99253,99457,106950,109878,112503,114349,114812,116339,119213,122141,124966,128611,131007,
#Partially deleted in new
chr10	69269999	69401879	chr10:69269999-69401879	1	+	69300834	69401135	0	22	109,176,100,48,93,163,149,120,96,100,184,156,234,305,149,120,96,100,184,156,234,889,	0,12529,18671,25633,30769,73827,89897,94783,98536,99237,99441,106934,109862,112487,114333,114796,116323,119197,122125,124950,128595,130991,
#Partially deleted in new
chr10	69269999	69401879	chr10:69269999-69401879	1	+	69288743	69401135	0	21	109,176,100,48,163,149,120,96,100,184,156,234,305,149,120,96,100,184,156,234,889,	0,12529,18671,25633,73827,89897,94783,98536,99237,99441,106934,109862,112487,114333,114796,116323,119197,122125,124950,128595,130991,
#Partially deleted in new
chr10	69269999	69343842	chr10:69269999-69343842	0	+	69288743	69343842	789624	5	109,176,100,48,16,	0,12529,18671,25633,73827,
#Partially deleted in new
chr10	69269999	69343843	chr10:69269999-69343843	0	+	69269999	69269999	8553170	6	109,122,100,48,179,17,	0,12529,18671,25633,68498,73827,
#Partially deleted in new
chr10	69270004	69300812	chr10:69270004-69300812	0	+	69270004	69270004	8553170	6	104,262,122,100,48,44,	0,8519,12524,18666,25628,30764,
#Partially deleted in new
chr10	69270004	69360016	chr10:69270004-69360016	0	+	69270004	69270004	8553170	7	104,122,100,48,93,163,120,	0,12524,18666,25628,30764,73822,89892,
#Partially deleted in new
chr10	69270026	69343840	chr10:69270026-69343840	0	+	69288743	69343840	789624	6	82,90,122,100,48,14,	0,980,12502,18644,25606,73800,
#Partially deleted in new
chr10	69278495	69401882	chr10:69278495-69401882	1	+	69288743	69401135	0	21	290,122,100,48,163,149,120,96,100,184,156,234,305,149,120,96,100,184,156,234,892,	0,4033,10175,17137,65331,81401,86287,90040,90741,90945,98438,101366,103991,105837,106300,107827,110701,113629,116454,120099,122495,
#Partially deleted in new
chr10	69278527	69343890	chr10:69278527-69343890	0	+	69278527	69278527	8553170	5	258,122,100,48,64,	0,4001,10143,17105,65299,
#Partially deleted in new
chr10	69278584	69296326	chr10:69278584-69296326	0	+	69278584	69278584	8553170	5	201,122,100,48,122,	0,3944,10086,17048,17620,
#Partially deleted in new
chr10	69282554	69364786	chr10:69282554-69364786	0	+	69300834	69364786	789624	7	150,100,48,93,163,149,4,	0,6116,13078,18214,61272,77342,82228,
#Deleted in new
chr10	69300431	69300817	chr10:69300431-69300817	7	-	69300431	69300431	16724991	1	386,	0,
#Partially deleted in new
chr10	69315784	69401443	chr10:69315784-69401443	1	+	69315954	69401135	0	18	230,163,149,120,96,100,184,156,234,305,149,120,96,100,184,156,234,453,	0,28042,44112,48998,52751,53452,53656,61149,64077,66702,68548,69011,70538,73412,76340,79165,82810,85206,
#Partially deleted in new
chr10	69318843	69401882	chr10:69318843-69401882	3	+	69318947	69401135	0	18	167,163,149,120,96,100,184,156,234,305,149,120,96,100,184,156,234,892,	0,24983,41053,45939,49692,50393,50597,58090,61018,63643,65489,65952,67479,70353,73281,76106,79751,82147,
#Partially deleted in new
chr10	69318852	69401864	chr10:69318852-69401864	0	+	69318947	69343875	789624	18	325,163,149,120,96,100,184,156,234,305,149,120,96,100,184,156,234,874,	0,24974,41044,45930,49683,50384,50588,58081,61009,63634,65480,65943,67470,70344,73272,76097,79742,82138,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	69338019	69386791	chr10:69338019-69386791	0	+	69338019	69338019	8553170	12	289,163,149,120,96,100,184,156,234,305,583,469,	0,5807,21877,26763,30516,31217,31421,38914,41842,44467,46313,48303,
#Partially deleted in new
chr10	69392278	69401118	chr10:69392278-69401118	0	+	69392278	69392278	8553170	3	30,156,128,	0,2671,8712,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	69403902	69409282	chr10:69403902-69409282	1	-	69404825	69409026	789624	3	1182,197,361,	0,3181,5019,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	69404201	69416323	chr10:69404201-69416323	1	-	69404825	69416323	789624	6	883,197,154,195,204,80,	0,2882,4720,10743,11730,12042,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	69404483	69416867	chr10:69404483-69416867	3	-	69404825	69416323	789624	5	601,197,154,195,936,	0,2600,4438,10461,11448,
#Deleted in new
chr10	69432971	69433371	chr10:69432971-69433371	7	-	69432971	69432971	16724991	1	400,	0,
#Partially deleted in new
chr10	69451472	69507669	chr10:69451472-69507669	3	+	69451594	69506978	789624	8	218,186,75,96,117,48,117,841,	0,32218,33668,44121,46807,52965,54651,55356,
#Partially deleted in new
chr10	69451476	69484092	chr10:69451476-69484092	0	+	69451476	69451476	8553170	2	214,402,	0,32214,
#Partially deleted in new
chr10	69483824	69506340	chr10:69483824-69506340	0	+	69483824	69483824	8553170	6	52,75,96,117,48,217,	0,1316,11769,14455,20613,22299,
#Partially deleted in new
chr10	69483867	69507666	chr10:69483867-69507666	0	+	69483867	69507574	789624	7	9,75,96,117,48,117,113,	0,1273,11726,14412,20570,22256,23686,
#Partially deleted in new
chr10	69494947	69506856	chr10:69494947-69506856	0	+	69494947	69494947	8553170	6	303,96,117,48,117,28,	0,646,3332,9490,11176,11881,
#Partially deleted in new
chr10	69494970	69507077	chr10:69494970-69507077	0	+	69494970	69494970	8553170	6	66,96,117,48,117,249,	0,623,3309,9467,11153,11858,
#Partially deleted in new
chr10	69495134	69506995	chr10:69495134-69506995	0	+	69495134	69495134	8553170	6	289,96,117,48,117,167,	0,459,3145,9303,10989,11694,
#Partially deleted in new
chr10	69505967	69507229	chr10:69505967-69507229	0	+	69505967	69505967	8553170	2	273,401,	0,861,
#Partially deleted in new
chr10	69523310	69523650	chr10:69523310-69523650	7	-	69523310	69523310	16724991	1	340,	0,
#Deleted in new
chr10	69571697	69573238	chr10:69571697-69573238	3	-	69572398	69573043	789624	2	1347,29,	0,1512,
#Deleted in new
chr10	69575806	69577154	chr10:69575806-69577154	3	+	69575806	69575806	8553170	2	331,172,	0,1176,
#Deleted in new
chr10	69589879	69590355	chr10:69589879-69590355	7	-	69589879	69589879	16724991	1	476,	0,
#Deleted in new
chr10	69590582	69591262	chr10:69590582-69591262	7	-	69590582	69590582	16724991	1	680,	0,
#Deleted in new
chr10	69591405	69592931	chr10:69591405-69592931	7	-	69591405	69591405	16724991	1	1526,	0,
#Deleted in new
chr10	69594040	69594932	chr10:69594040-69594932	7	-	69594040	69594040	16724991	1	892,	0,
#Deleted in new
chr10	69595486	69596436	chr10:69595486-69596436	7	-	69595486	69595486	16724991	1	950,	0,
#Partially deleted in new
chr10	69630250	69633112	chr10:69630250-69633112	0	+	69630250	69630250	8553170	3	63,360,323,	0,1229,2539,
#Partially deleted in new
chr10	69630257	69633599	chr10:69630257-69633599	3	+	69631743	69633059	789624	4	56,68,131,810,	0,1222,1451,2532,
#Partially deleted in new
chr10	69630543	69632877	chr10:69630543-69632877	0	+	69630636	69632877	789624	4	116,68,131,88,	0,936,1165,2246,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	69684898	69692452	chr10:69684898-69692452	3	+	69684898	69684898	8553170	4	220,129,76,151,	0,5702,6171,7403,
#Deleted in new
chr10	69778961	69779838	chr10:69778961-69779838	7	+	69778961	69778961	16724991	1	877,	0,
#Partially deleted in new
chr10	69801866	69959144	chr10:69801866-69959144	3	+	69802423	69958701	789624	41	851,70,8,27,36,27,51,36,27,27,27,27,27,66,108,27,36,45,33,27,63,54,87,54,45,69,24,63,45,153,45,42,27,81,36,54,54,36,87,39,446,	0,20502,65931,70317,73261,76172,78636,85589,86437,87547,92685,92808,93683,96830,100881,103066,103920,115422,116418,117195,117798,120015,120841,121935,123096,123937,125220,127070,128176,128533,130693,133483,134889,135768,139121,142258,143804,145440,151015,155137,156832,
#Partially deleted in new
chr10	69801930	69958900	chr10:69801930-69958900	0	+	69802423	69931231	789624	41	787,70,8,27,36,27,51,36,27,27,27,27,27,57,66,108,27,36,45,33,27,54,87,54,45,69,24,63,45,153,97,45,42,27,81,54,54,36,87,39,202,	0,20438,65867,70253,73197,76108,78572,85525,86373,87483,92621,92744,93619,95544,96766,100817,103002,103856,115358,116354,117131,119951,120777,121871,123032,123873,125156,127006,128112,128469,129229,130629,133419,134825,135704,142194,143740,145376,150951,155073,156768,
#Partially deleted in new
chr10	69801931	69959148	chr10:69801931-69959148	1	+	69802423	69958701	789624	39	786,70,8,27,36,51,36,27,27,27,27,27,57,108,27,36,45,33,27,54,87,54,45,69,24,63,45,153,45,42,27,81,36,54,54,36,87,39,450,	0,20437,65866,70252,73196,78571,85524,86372,87482,92620,92743,93618,95543,100816,103001,103855,115357,116353,117130,119950,120776,121870,123031,123872,125155,127005,128111,128468,130628,133418,134824,135703,139056,142193,143739,145375,150950,155072,156767,
#Partially deleted in new
chr10	69801931	69959148	chr10:69801931-69959148	1	+	69802423	69958701	789624	38	786,70,8,27,36,51,36,27,27,27,27,27,57,108,27,36,45,33,27,54,87,54,45,69,24,63,45,153,45,42,27,81,54,54,36,87,39,450,	0,20437,65866,70252,73196,78571,85524,86372,87482,92620,92743,93618,95543,100816,103001,103855,115357,116353,117130,119950,120776,121870,123031,123872,125155,127005,128111,128468,130628,133418,134824,135703,142193,143739,145375,150950,155072,156767,
#Partially deleted in new
chr10	69801931	69959148	chr10:69801931-69959148	1	+	69802423	69958701	789624	40	786,70,8,27,36,51,36,27,27,27,27,27,57,66,108,27,36,45,33,27,54,87,54,45,69,24,63,45,153,45,42,27,81,36,54,54,36,87,39,450,	0,20437,65866,70252,73196,78571,85524,86372,87482,92620,92743,93618,95543,96765,100816,103001,103855,115357,116353,117130,119950,120776,121870,123031,123872,125155,127005,128111,128468,130628,133418,134824,135703,139056,142193,143739,145375,150950,155072,156767,
#Partially deleted in new
chr10	69802117	69958733	chr10:69802117-69958733	1	+	69802423	69958701	789624	34	600,70,35,27,27,27,27,27,66,108,27,36,45,33,27,54,87,54,45,69,24,63,45,153,42,27,81,36,54,54,36,87,39,35,	0,20251,85339,86186,87296,92434,92557,93432,96579,100630,102815,103669,115171,116167,116944,119764,120590,121684,122845,123686,124969,126819,127925,128282,133232,134638,135517,138870,142007,143553,145189,150764,154886,156581,
#Partially deleted in new
chr10	69802117	69958733	chr10:69802117-69958733	1	+	69802423	69958701	789624	35	600,70,8,36,27,27,27,27,27,66,108,27,36,45,33,27,54,87,54,45,69,24,63,45,153,42,27,81,36,54,54,36,87,39,35,	0,20251,65680,85338,86186,87296,92434,92557,93432,96579,100630,102815,103669,115171,116167,116944,119764,120590,121684,122845,123686,124969,126819,127925,128282,133232,134638,135517,138870,142007,143553,145189,150764,154886,156581,
#Partially deleted in new
chr10	69802423	69958701	chr10:69802423-69958701	1	+	69802423	69958701	789624	37	294,70,8,27,36,51,36,27,27,27,27,27,57,108,27,36,45,33,27,54,87,54,45,69,24,63,45,153,42,27,81,54,54,36,87,39,3,	0,19945,65374,69760,72704,78079,85032,85880,86990,92128,92251,93126,95051,100324,102509,103363,114865,115861,116638,119458,120284,121378,122539,123380,124663,126513,127619,127976,132926,134332,135211,141701,143247,144883,150458,154580,156275,
#Partially deleted in new
chr10	69802423	69958701	chr10:69802423-69958701	1	+	69802423	69958701	789624	34	294,70,8,27,36,27,27,27,27,27,57,108,27,36,45,33,27,54,87,54,45,69,24,63,45,153,42,27,81,54,54,36,39,3,	0,19945,65374,69760,85032,85880,86990,92128,92251,93126,95051,100324,102509,103363,114865,115861,116638,119458,120284,121378,122539,123380,124663,126513,127619,127976,132926,134332,135211,141701,143247,144883,154580,156275,
#Partially deleted in new
chr10	69802423	69958701	chr10:69802423-69958701	1	+	69802423	69958701	789624	38	294,70,8,27,36,51,36,27,27,27,27,27,66,108,27,36,45,33,27,54,87,54,45,69,24,63,45,153,45,42,27,81,54,54,36,87,39,3,	0,19945,65374,69760,72704,78079,85032,85880,86990,92128,92251,93126,96273,100324,102509,103363,114865,115861,116638,119458,120284,121378,122539,123380,124663,126513,127619,127976,130136,132926,134332,135211,141701,143247,144883,150458,154580,156275,
#Partially deleted in new
chr10	69927087	69959015	chr10:69927087-69959015	0	+	69927087	69958701	789624	14	23,63,45,153,42,27,81,36,54,54,36,87,39,317,	0,1849,2955,3312,8262,9668,10547,13900,17037,18583,20219,25794,29916,31611,
#Partially deleted in new
chr10	69930452	69958927	chr10:69930452-69958927	0	+	69930452	69958701	789624	10	100,42,27,81,54,54,36,87,39,229,	0,4897,6303,7182,13672,15218,16854,22429,26551,28246,
#Partially deleted in new
chr10	69944124	69964275	chr10:69944124-69964275	0	+	69944124	69944124	8553170	6	54,54,36,78,39,29,	0,1546,3182,9823,12879,20122,
#Deleted in new
chr10	69954900	69959142	chr10:69954900-69959142	0	+	69954900	69954900	8553170	2	2142,444,	0,3798,
#Partially deleted in new
chr10	69994625	70007836	chr10:69994625-70007836	3	-	69994625	69994625	8553170	3	229,213,82,	0,12831,13129,
#Partially deleted in new
chr10	70052795	70112280	chr10:70052795-70112280	3	+	70075658	70111683	0	9	205,231,107,198,111,100,90,175,763,	0,22804,37264,38961,40939,42858,47412,56237,58722,
#Partially deleted in new
chr10	70052879	70109180	chr10:70052879-70109180	0	+	70075658	70109180	789624	7	121,231,107,111,100,90,148,	0,22720,37180,40855,42774,47328,56153,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	70098222	70124102	chr10:70098222-70124102	3	-	70114177	70124084	789624	9	1397,185,201,153,109,93,120,116,196,	0,15922,16697,18399,19589,22284,22869,25182,25684,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	70112269	70132934	chr10:70112269-70132934	1	-	70114177	70124084	789624	9	2060,201,153,109,93,120,116,194,201,	0,2650,4352,5542,8237,8822,11135,11637,20464,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	70112270	70132934	chr10:70112270-70132934	1	-	70114177	70124084	789624	9	2059,201,153,109,93,120,116,191,201,	0,2649,4351,5541,8236,8821,11134,11636,20463,
#Partially deleted in new
chr10	70114774	70118351	chr10:70114774-70118351	0	-	70114774	70114774	8553170	4	346,153,109,344,	0,1847,3037,3233,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	70137980	70146586	chr10:70137980-70146586	3	-	70139923	70146586	789624	4	2161,186,131,1166,	0,4687,5861,7440,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	70137980	70146656	chr10:70137980-70146656	1	-	70140110	70146586	789624	2	2161,1236,	0,7440,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	70137980	70144835	chr10:70137980-70144835	0	-	70137980	70137980	789624	3	2161,186,994,	0,4687,5861,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	70137982	70146676	chr10:70137982-70146676	0	-	70137982	70137982	789624	4	2159,186,131,144,	0,4685,5859,8550,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	70147288	70170523	chr10:70147288-70170523	3	-	70152475	70161915	0	8	5304,132,104,66,120,74,70,111,	0,6549,10475,13715,14330,14569,15401,23124,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	70150203	70163031	chr10:70150203-70163031	1	-	70152475	70161915	0	7	2389,132,104,66,120,74,342,	0,3634,7560,10800,11415,11654,12486,
#Partially deleted in new
chr10	70150203	70170523	chr10:70150203-70170523	1	-	70152475	70161915	0	7	2389,132,104,66,120,74,111,	0,3634,7560,10800,11415,11654,20209,
#Partially deleted in new
chr10	70150222	70161915	chr10:70150222-70161915	1	-	70152475	70161915	0	7	1156,1174,132,104,66,120,58,	0,1196,3615,7541,10781,11396,11635,
#Partially deleted in new
chr10	70152149	70157823	chr10:70152149-70157823	0	-	70152475	70157823	789624	4	443,132,37,60,	0,1688,2938,5614,
#Partially deleted in new
chr10	70157674	70161915	chr10:70157674-70161915	1	-	70157745	70161915	789624	4	193,66,120,58,	0,3329,3944,4183,
#Deleted in new
chr10	70161283	70161931	chr10:70161283-70161931	0	-	70161283	70161283	8553170	2	455,74,	0,574,
#Partially deleted in new
chr10	70163684	70164124	chr10:70163684-70164124	7	+	70163684	70163684	16724991	1	440,	0,
#Deleted in new
chr10	70198987	70199239	chr10:70198987-70199239	7	-	70198987	70198987	16724991	1	252,	0,
#Partially deleted in new
chr10	70202829	70233427	chr10:70202829-70233427	3	-	70203154	70233327	789624	11	357,43,70,86,128,127,87,120,54,59,164,	0,2043,3434,6375,6728,10633,11670,14982,15934,27511,30434,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	70203588	70210250	chr10:70203588-70210250	0	-	70203588	70203588	8553170	3	2745,86,693,	0,5616,5969,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	70209644	70233337	chr10:70209644-70233337	0	-	70210393	70233327	789624	8	41,225,127,87,120,54,59,74,	0,550,3818,4855,8167,9119,20696,23619,
#Partially deleted in new
chr10	70210393	70233434	chr10:70210393-70233434	1	-	70210393	70233327	789624	7	26,127,87,120,54,59,171,	0,3069,4106,7418,8370,19947,22870,
#Partially deleted in new
chr10	70218444	70230379	chr10:70218444-70230379	0	-	70218444	70218444	8553170	2	373,39,	0,11896,
#Partially deleted in new
chr10	70218778	70233911	chr10:70218778-70233911	0	-	70218778	70218778	8553170	3	39,59,184,	0,11562,14949,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	70247328	70283676	chr10:70247328-70283676	3	-	70254956	70283676	789624	4	8499,100,315,7,	0,13311,18748,36341,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	70298969	70382650	chr10:70298969-70382650	1	-	70301353	70340577	789624	4	2539,168,150,102,	0,24893,41583,83579,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	70298969	70376779	chr10:70298969-70376779	1	-	70301353	70376533	789624	4	2539,168,145,51,	0,24893,77482,77759,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	70298972	70381914	chr10:70298972-70381914	1	-	70301353	70376533	789624	5	2536,168,150,145,415,	0,24890,41580,77479,82527,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	70298972	70382589	chr10:70298972-70382589	3	-	70301353	70376533	789624	5	2536,168,150,145,96,	0,24890,41580,77479,83521,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	70298975	70382626	chr10:70298975-70382626	0	-	70301353	70376533	789624	4	2533,150,145,78,	0,41577,77476,83573,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	70298975	70382626	chr10:70298975-70382626	1	-	70301353	70376533	789624	4	2533,168,145,78,	0,24887,77476,83573,
#Partially deleted in new
chr10	70301384	70382624	chr10:70301384-70382624	0	-	70301384	70376533	789624	5	124,168,150,145,76,	0,22478,39168,75067,81164,
#Partially deleted in new
chr10	70389425	70390626	chr10:70389425-70390626	7	+	70389425	70389425	16724991	1	1201,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	70404378	70428618	chr10:70404378-70428618	3	+	70404401	70421747	0	3	168,186,6903,	0,15535,17337,
#Partially deleted in new
chr10	70432314	70441667	chr10:70432314-70441667	3	-	70432935	70441667	0	3	774,698,193,	0,2971,9160,
#Partially deleted in new
chr10	70432748	70447951	chr10:70432748-70447951	0	-	70432935	70447951	789624	3	340,698,28,	0,2537,15175,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	70434828	70436556	chr10:70434828-70436556	3	+	70434828	70434828	8553170	1	1728,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr10	70478820	70568449	chr10:70478820-70568449	3	+	70525951	70566733	789624	20	239,214,103,180,165,161,76,152,100,105,96,129,117,156,183,141,72,141,156,1869,	0,47102,50408,51068,52469,53800,54174,55101,55604,55918,58990,59459,60071,60271,60759,62281,62642,68485,85543,87760,
#Partially deleted in new
chr10	70485335	70486325	chr10:70485335-70486325	7	-	70485335	70485335	16724991	2	61,607,	0,383,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	70597347	70602759	chr10:70597347-70602759	1	-	70598052	70600902	789624	3	1834,543,115,	0,3016,5297,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	70597347	70602687	chr10:70597347-70602687	1	-	70597681	70600902	789624	3	494,543,43,	0,3016,5297,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	70597348	70602775	chr10:70597348-70602775	3	-	70598052	70600902	789624	3	1833,569,131,	0,3015,5296,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	70597415	70602741	chr10:70597415-70602741	0	-	70597415	70597415	8553170	2	426,97,	0,5229,
#Partially deleted in new
chr10	70672802	70762441	chr10:70672802-70762441	1	+	70672802	70760853	789624	22	82,440,157,191,84,148,106,144,133,114,149,176,134,124,81,164,169,133,208,130,111,2082,	0,1753,29509,35785,56491,57299,59451,61082,62366,63877,66039,68184,70745,71263,72423,77019,78675,79292,80997,85159,85372,87557,
#Partially deleted in new
chr10	70672802	70762441	chr10:70672802-70762441	3	+	70672802	70760853	789624	22	82,440,157,191,84,157,106,144,133,114,149,176,134,124,81,164,169,133,208,130,111,2082,	0,1753,29509,35785,56491,57299,59451,61082,62366,63877,66039,68184,70745,71263,72423,77019,78675,79292,80997,85159,85372,87557,
#Partially deleted in new
chr10	70771238	70785401	chr10:70771238-70785401	3	-	70771375	70783379	789624	11	223,53,145,82,183,80,150,236,187,127,117,	0,1275,2974,3950,5914,7318,8354,10562,12100,13408,14046,
#Partially deleted in new
chr10	70771238	70785401	chr10:70771238-70785401	1	-	70771375	70783379	789624	11	223,53,145,82,186,80,150,236,187,127,117,	0,1275,2974,3950,5914,7318,8354,10562,12100,13408,14046,
#Deleted in new
chr10	70771239	70772339	chr10:70771239-70772339	0	-	70771239	70771239	8553170	2	222,131,	0,969,
#Partially deleted in new
chr10	70794229	70794523	chr10:70794229-70794523	7	-	70794229	70794229	16724991	1	294,	0,
#Partially deleted in new
chr10	70815960	70820484	chr10:70815960-70820484	0	+	70815960	70815960	8553170	3	166,70,301,	0,850,4223,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr10	70815969	70881173	chr10:70815969-70881173	3	+	70816853	70877335	0	15	157,70,166,68,148,77,129,89,106,99,150,239,147,121,3979,	0,841,28503,35173,38738,41644,43401,52375,53822,55078,55867,57381,59432,60571,61225,
#Partially deleted in new
chr10	70844496	70860486	chr10:70844496-70860486	0	+	70844496	70860437	789624	6	142,68,148,77,129,94,	0,6646,10211,13117,14874,15896,
#Partially deleted in new
chr10	70854705	70859605	chr10:70854705-70859605	0	+	70854705	70859550	789624	3	150,77,235,	0,2908,4665,
#Partially deleted in new
chr10	70857184	70868379	chr10:70857184-70868379	0	+	70857184	70857184	8553170	3	506,129,35,	0,2186,11160,
#Partially deleted in new
chr10	70857602	70870026	chr10:70857602-70870026	0	+	70857602	70857602	8553170	4	88,129,89,235,	0,1768,10742,12189,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	70866273	70871880	chr10:70866273-70871880	0	+	70866273	70866273	8553170	6	432,89,98,106,99,44,	0,2071,3053,3518,4774,5563,
#Partially deleted in new
chr10	70869185	70871954	chr10:70869185-70871954	0	+	70869185	70869185	8553170	4	239,106,99,118,	0,606,1862,2651,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	70882279	70885899	chr10:70882279-70885899	0	-	70882279	70882279	8553170	3	206,81,102,	0,2872,3518,
#Partially deleted in new
chr10	70883509	70888784	chr10:70883509-70888784	3	-	70883949	70888533	789624	4	539,81,132,254,	0,1642,2288,5021,
#Partially deleted in new
chr10	70883931	70888254	chr10:70883931-70888254	0	-	70883931	70883931	8553170	4	117,81,132,402,	0,1220,1866,3921,
#Partially deleted in new
chr10	70927054	71077810	chr10:70927054-71077810	3	+	70927054	70927054	8553170	5	164,94,134,605,1202,	0,51802,99524,146318,149554,
#Deleted in new
chr10	70929924	70932057	chr10:70929924-70932057	3	+	70929924	70929924	8553170	2	1529,434,	0,1699,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	70939052	70955641	chr10:70939052-70955641	3	+	70939052	70939052	789624	3	128,328,78,	0,15166,16511,
#Partially deleted in new
chr10	70939132	70944144	chr10:70939132-70944144	1	+	70939132	70939132	789624	2	48,361,	0,4651,
#Partially deleted in new
chr10	71212569	71302864	chr10:71212569-71302864	3	+	71212985	71299277	789624	17	495,225,144,104,181,168,165,33,195,390,88,169,234,150,165,182,3753,	0,67251,72150,72756,74119,75028,75998,76388,78345,78862,79897,80835,81130,83241,84008,85339,86542,
#Partially deleted in new
chr10	71212926	71302864	chr10:71212926-71302864	1	+	71212985	71299277	789624	16	138,225,144,104,181,168,165,195,390,88,169,234,150,165,182,3753,	0,66894,71793,72399,73762,74671,75641,77988,78505,79540,80478,80773,82884,83651,84982,86185,
#Deleted in new
chr10	71217223	71218228	chr10:71217223-71218228	3	-	71217223	71217223	789624	2	412,235,	0,770,
#Deleted in new
chr10	71217223	71217825	chr10:71217223-71217825	0	-	71217223	71217223	8553170	2	412,60,	0,542,
#Partially deleted in new
chr10	71319257	71363390	chr10:71319257-71363390	3	+	71319309	71362608	789624	6	53,299,83,227,163,1437,	0,3498,24951,32304,36823,42696,
#Partially deleted in new
chr10	71319258	71363385	chr10:71319258-71363385	1	+	71319309	71362608	789624	6	52,299,83,227,163,1432,	0,3497,24950,32303,36822,42695,
#Partially deleted in new
chr10	71319261	71363351	chr10:71319261-71363351	0	+	71319309	71356144	789624	5	49,299,227,163,1398,	0,3494,32300,36819,42692,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	71319264	71365118	chr10:71319264-71365118	0	+	71319309	71356144	789624	6	46,299,83,163,1128,673,	0,3491,24944,36816,42689,45181,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	71319278	71381423	chr10:71319278-71381423	0	+	71319309	71356144	789624	6	32,299,227,163,117,1658,	0,3477,32283,36802,56416,60487,
#Partially deleted in new
chr10	71319281	71363352	chr10:71319281-71363352	1	+	71322988	71362608	789624	6	450,299,83,227,163,1399,	0,3474,24927,32280,36799,42672,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	71319281	71381360	chr10:71319281-71381360	0	+	71319309	71356149	789624	5	29,299,163,117,1595,	0,3474,36799,56413,60484,
#Partially deleted in new
chr10	71319281	71363351	chr10:71319281-71363351	0	+	71319309	71352625	789624	7	29,299,83,227,252,163,1398,	0,3474,24927,32280,33285,36799,42672,
#Partially deleted in new
chr10	71319282	71363390	chr10:71319282-71363390	0	+	71319309	71356149	789624	4	28,299,163,1437,	0,3473,36798,42671,
#Partially deleted in new
chr10	71319284	71363351	chr10:71319284-71363351	0	+	71319309	71352636	789624	6	26,299,227,252,163,1398,	0,3471,32277,33282,36796,42669,
#Partially deleted in new
chr10	71319354	71363229	chr10:71319354-71363229	0	+	71322988	71352636	789624	6	377,299,227,252,163,1276,	0,3401,32207,33212,36726,42599,
#Partially deleted in new
chr10	71319665	71363359	chr10:71319665-71363359	0	+	71322988	71352625	789624	7	66,299,83,227,252,163,1406,	0,3090,24543,31896,32901,36415,42288,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	71322823	71365168	chr10:71322823-71365168	0	+	71322823	71356149	789624	4	231,163,1128,723,	0,33257,39130,41622,
#Partially deleted in new
chr10	71351687	71362519	chr10:71351687-71362519	0	+	71351687	71351687	8553170	3	101,169,566,	0,4393,10266,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	71364242	71366374	chr10:71364242-71366374	3	+	71364242	71364242	8553170	1	2132,	0,
#Partially deleted in new
chr10	71396933	71815947	chr10:71396933-71815947	3	+	71439831	71815278	0	70	385,72,78,143,48,93,195,129,79,113,189,6,150,159,65,238,106,128,73,117,113,108,190,146,220,153,114,149,61,149,136,389,102,3,150,129,129,228,222,120,181,134,210,108,103,126,204,459,117,225,170,138,120,178,212,192,114,130,252,162,257,98,121,80,41,61,130,123,105,996,	0,42893,49384,113148,114020,114186,169808,173856,180980,218570,220271,246927,248897,249525,278178,280522,282453,285511,290713,293534,297213,298484,305088,305615,307977,309963,312164,315731,327111,328438,333535,335053,337306,337722,341564,342710,343888,344760,380746,381255,382333,387353,387957,388697,392006,393354,394198,396248,400170,401420,402177,402558,403702,405964,406275,408872,409234,410343,410582,410912,412886,413538,414381,414577,414779,415021,415546,415834,416310,418018,
#Partially deleted in new
chr10	71396933	71732417	chr10:71396933-71732417	1	+	71439831	71732417	789624	32	385,72,78,143,48,93,195,129,79,113,189,6,150,159,65,238,106,128,73,117,113,108,190,146,220,153,114,153,54,149,136,431,	0,42893,49384,113148,114020,114186,169808,173856,180980,218570,220271,246927,248897,249525,278178,280522,282453,285511,290713,293534,297213,298484,305088,305615,307977,309963,312164,315731,327118,328438,333535,335053,
#Partially deleted in new
chr10	71396933	71815945	chr10:71396933-71815945	1	+	71439831	71815278	789624	68	385,72,78,143,48,93,195,129,79,113,189,156,159,65,238,106,128,73,117,113,108,190,146,220,153,114,149,61,149,136,389,102,153,129,129,228,222,120,181,134,210,108,103,126,204,459,117,225,170,138,120,178,212,192,114,130,252,162,257,98,121,80,41,61,130,123,105,994,	0,42893,49384,113148,114020,114186,169808,173856,180980,218570,220271,248891,249525,278178,280522,282453,285511,290713,293534,297213,298484,305088,305615,307977,309963,312164,315731,327111,328438,333535,335053,337306,341561,342710,343888,344760,380746,381255,382333,387353,387957,388697,392006,393354,394198,396248,400170,401420,402177,402558,403702,405964,406275,408872,409234,410343,410582,410912,412886,413538,414381,414577,414779,415021,415546,415834,416310,418018,
#Partially deleted in new
chr10	71396935	71646780	chr10:71396935-71646780	1	+	71439831	71646761	0	14	383,72,78,143,48,93,195,129,79,113,189,6,150,322,	0,42891,49382,113146,114018,114184,169806,173854,180978,218568,220269,246925,248895,249523,
#Partially deleted in new
chr10	71396936	71707510	chr10:71396936-71707510	1	+	71439831	71707129	789624	26	382,72,78,143,48,93,195,129,79,113,189,6,150,159,65,238,106,128,73,117,113,108,190,146,220,614,	0,42890,49381,113145,114017,114183,169805,173853,180977,218567,220268,246924,248894,249522,278175,280519,282450,285508,290710,293531,297210,298481,305085,305612,307974,309960,
#Partially deleted in new
chr10	71396948	71646780	chr10:71396948-71646780	1	+	71510113	71646761	789624	12	370,143,48,93,191,18,43,79,113,189,150,322,	0,113133,114005,114171,169793,173879,173927,180965,218555,220256,248882,249510,
#Partially deleted in new
chr10	71396948	71511144	chr10:71396948-71511144	0	+	71397188	71511144	789624	4	370,143,48,25,	0,113133,114005,114171,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr10	71396961	71732723	chr10:71396961-71732723	1	+	71439831	71732417	789624	32	357,72,78,143,48,93,195,129,79,113,189,6,150,159,65,238,106,128,73,117,113,108,190,146,220,153,114,149,61,149,136,737,	0,42865,49356,113120,113992,114158,169780,173828,180952,218542,220243,246899,248869,249497,278150,280494,282425,285483,290685,293506,297185,298456,305060,305587,307949,309935,312136,315703,327083,328410,333507,335025,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr10	71439831	71717907	chr10:71439831-71717907	1	+	71439831	71713318	789624	28	67,78,143,48,93,195,129,79,113,189,6,150,159,65,238,106,128,73,117,113,108,190,146,220,153,114,149,4856,	0,6486,70250,71122,71288,126910,130958,138082,175672,177373,204029,205999,206627,235280,237624,239555,242613,247815,250636,254315,255586,262190,262717,265079,267065,269266,272833,273220,
#Deleted in new
chr10	71508152	71511873	chr10:71508152-71511873	3	-	71508152	71508152	789624	3	186,96,96,	0,1762,3625,
#Partially deleted in new
chr10	71511119	71647908	chr10:71511119-71647908	0	+	71511119	71647696	789624	10	93,195,129,79,113,189,6,150,159,290,	0,55622,59670,66794,104384,106085,132741,134711,135339,136499,
#Partially deleted in new
chr10	71512112	71646782	chr10:71512112-71646782	0	+	71512112	71512112	8553170	10	205,195,129,79,113,189,60,6,150,324,	0,54629,58677,65801,103391,105092,123125,131748,133718,134346,
#Partially deleted in new
chr10	71570794	71716872	chr10:71570794-71716872	0	+	71570794	71715507	789624	23	124,79,113,189,60,6,150,159,65,238,106,128,73,117,113,108,190,146,220,153,114,149,1671,	0,7119,44709,46410,64443,73066,75036,75664,104317,106661,108592,111650,116852,119673,123352,124623,131227,131754,134116,136102,138303,141870,144407,
#Partially deleted in new
chr10	71617284	71647904	chr10:71617284-71647904	0	+	71617284	71647696	789624	4	109,150,159,286,	0,28546,29174,30334,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	71711701	71719821	chr10:71711701-71719821	1	-	71715935	71716337	789624	2	4641,195,	0,7925,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	71711709	71737824	chr10:71711709-71737824	3	-	71715935	71716337	789624	2	4633,97,	0,26018,
#Partially deleted in new
chr10	71712603	71742036	chr10:71712603-71742036	0	+	71712603	71712603	8553170	9	210,61,136,389,102,150,129,129,343,	0,11441,17865,19383,21636,25894,27040,28218,29090,
#Partially deleted in new
chr10	71747558	71773498	chr10:71747558-71773498	3	-	71751252	71773439	789624	7	3732,194,28,108,57,429,141,	0,4109,5416,7800,13309,14039,25799,
#Partially deleted in new
chr10	71750915	71757630	chr10:71750915-71757630	0	-	71750915	71750915	8553170	5	375,194,28,108,53,	0,752,2059,4443,6662,
#Deleted in new
chr10	71760481	71761944	chr10:71760481-71761944	0	-	71760481	71760481	8553170	2	443,347,	0,1116,
#Deleted in new
chr10	71790746	71790800	chr10:71790746-71790800	3	+	71790746	71790746	5263520	1	54,	0,
#Partially deleted in new
chr10	71793636	71815660	chr10:71793636-71815660	0	+	71793636	71794621	789624	25	4,93,548,117,225,170,138,120,178,212,192,114,130,252,162,257,98,121,80,41,61,130,123,105,709,	0,899,1895,3467,4717,5474,5855,6999,9261,9572,12169,12531,13640,13879,14209,16183,16835,17678,17874,18076,18318,18843,19131,19607,21315,
#Partially deleted in new
chr10	71795770	71815945	chr10:71795770-71815945	1	+	71797111	71815278	0	23	309,117,225,170,138,120,178,212,192,114,130,252,162,257,98,121,80,41,61,130,123,105,994,	0,1333,2583,3340,3721,4865,7127,7438,10035,10397,11506,11745,12075,14049,14701,15544,15740,15942,16184,16709,16997,17473,19181,
#Partially deleted in new
chr10	71795770	71815945	chr10:71795770-71815945	1	+	71797111	71815278	0	22	309,117,225,170,138,120,178,212,192,114,130,252,162,257,98,121,80,41,61,130,123,994,	0,1333,2583,3340,3721,4865,7127,7438,10035,10397,11506,11745,12075,14049,14701,15544,15740,15942,16184,16709,16997,19181,
#Partially deleted in new
chr10	71795770	71815660	chr10:71795770-71815660	0	+	71795770	71795791	8553170	22	309,117,225,170,138,120,178,212,192,114,130,252,162,257,98,121,80,41,61,130,123,709,	0,1333,2583,3340,3721,4865,7127,7438,10035,10397,11506,11745,12075,14049,14701,15544,15740,15942,16184,16709,16997,19181,
#Partially deleted in new
chr10	71796855	71815896	chr10:71796855-71815896	0	+	71796855	71796855	8553170	21	365,225,170,138,120,178,212,192,114,130,252,162,257,98,121,80,41,61,130,123,945,	0,1498,2255,2636,3780,6042,6353,8950,9312,10421,10660,10990,12964,13616,14459,14655,14857,15099,15624,15912,18096,
#Partially deleted in new
chr10	71816297	71851375	chr10:71816297-71851375	3	-	71817440	71851221	0	14	1179,108,81,158,187,96,132,57,144,201,126,75,134,194,	0,2319,2733,3167,3416,3942,5578,9539,11716,12579,14828,15548,18074,34884,
#Partially deleted in new
chr10	71816298	71851325	chr10:71816298-71851325	1	-	71817440	71851221	789624	14	1178,108,81,158,187,96,141,57,144,201,126,75,134,144,	0,2318,2732,3166,3415,3941,5577,9538,11715,12578,14827,15547,18073,34883,
#Partially deleted in new
chr10	71816298	71851325	chr10:71816298-71851325	1	-	71817440	71851221	789624	9	1178,108,81,158,70,21,75,134,144,	0,2318,2732,3166,3415,14932,15547,18073,34883,
#Deleted in new
chr10	71818621	71819271	chr10:71818621-71819271	0	-	71818621	71818621	8553170	2	103,241,	0,409,
#Partially deleted in new
chr10	71819750	71822205	chr10:71819750-71822205	0	-	71819750	71819750	8553170	3	150,96,330,	0,489,2125,
#Partially deleted in new
chr10	71819815	71828134	chr10:71819815-71828134	0	-	71819815	71828134	789624	6	85,96,132,9,57,121,	0,424,2060,4072,6021,8198,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	71844734	71844794	chr10:71844734-71844794	3	-	71844734	71844734	8553170	1	60,	0,
#Deleted in new
chr10	71878355	71879107	chr10:71878355-71879107	3	+	71878355	71878355	8553170	2	130,395,	0,357,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	71964364	72013564	chr10:71964364-72013564	3	+	72005842	72008471	789624	3	330,247,6393,	0,41371,42807,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	72053293	72054037	chr10:72053293-72054037	3	-	72053293	72053293	8553170	1	744,	0,
#Partially deleted in new
chr10	72059034	72089032	chr10:72059034-72089032	3	-	72062759	72088328	789624	12	3871,138,63,219,120,115,115,115,46,9,475,42,	0,3990,5143,7867,8578,9152,11277,13109,13468,13867,29105,29956,
#Partially deleted in new
chr10	72059034	72088773	chr10:72059034-72088773	1	-	72062759	72088328	789624	11	3871,138,63,219,120,115,115,115,46,9,634,	0,3990,5143,7867,8578,9152,11277,13109,13468,13867,29105,
#Partially deleted in new
chr10	72062405	72088526	chr10:72062405-72088526	1	-	72062759	72088328	789624	10	500,138,63,219,120,115,115,115,48,391,	0,619,1772,4496,5207,5781,7906,9738,10097,25730,
#Partially deleted in new
chr10	72062804	72069251	chr10:72062804-72069251	0	-	72062804	72062804	8553170	7	101,138,63,219,120,115,42,	0,220,1373,4097,4808,5382,6405,
#Partially deleted in new
chr10	72062863	72070151	chr10:72062863-72070151	0	-	72062863	72062863	8553170	7	42,138,63,219,120,115,110,	0,161,1314,4038,4749,5323,7178,
#Partially deleted in new
chr10	72063002	72068865	chr10:72063002-72068865	0	-	72063002	72063002	8553170	6	160,63,219,120,115,135,	0,1175,3899,4610,5184,5728,
#Deleted in new
chr10	72086225	72089032	chr10:72086225-72089032	1	-	72086947	72088328	789624	3	767,475,42,	0,1914,2765,
#Deleted in new
chr10	72086680	72088521	chr10:72086680-72088521	0	-	72086680	72086680	8553170	2	312,382,	0,1459,
#Deleted in new
chr10	72088356	72089032	chr10:72088356-72089032	0	-	72088356	72088356	8553170	2	258,42,	0,634,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	72096031	72216109	chr10:72096031-72216109	3	-	72097333	72213298	789624	10	1419,86,125,120,137,179,98,100,145,274,	0,32050,37025,56837,65506,100779,107395,114700,117155,119804,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	72096520	72216288	chr10:72096520-72216288	1	-	72097333	72213298	789624	10	930,86,125,120,137,179,98,100,145,82,	0,31561,36536,56348,65017,100290,106906,114211,116666,119686,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	72096520	72216275	chr10:72096520-72216275	1	-	72102368	72213298	789624	13	930,79,118,86,125,120,137,179,98,84,100,145,69,	0,5813,6329,31561,36536,56348,65017,100290,106906,107901,114211,116666,119686,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	72096521	72210737	chr10:72096521-72210737	0	-	72097442	72210737	789624	9	929,118,86,125,120,137,179,98,6,	0,6328,31560,36535,56347,65016,100289,106905,114210,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	72096521	72134463	chr10:72096521-72134463	0	-	72096521	72096521	8553170	3	929,86,1407,	0,31560,36535,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	72097040	72161556	chr10:72097040-72161556	0	-	72097442	72161556	789624	6	410,79,86,125,120,19,	0,5293,31041,36016,55828,64497,
#Partially deleted in new
chr10	72097253	72217134	chr10:72097253-72217134	1	-	72097333	72213298	789624	10	197,86,125,120,137,179,98,100,145,314,	0,30828,35803,55615,64284,99557,106173,113478,115933,119567,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	72102368	72216109	chr10:72102368-72216109	1	-	72102368	72213298	789624	12	44,118,86,125,120,137,179,98,84,100,145,274,	0,481,25713,30688,50500,59169,94442,101058,102053,108363,110818,113467,
#Partially deleted in new
chr10	72128081	72196989	chr10:72128081-72196989	0	-	72128081	72196989	789624	4	86,125,137,179,	0,4975,33456,68729,
#Partially deleted in new
chr10	72152897	72159375	chr10:72152897-72159375	0	-	72152897	72152897	8553170	2	91,430,	0,6048,
#Partially deleted in new
chr10	72161548	72213331	chr10:72161548-72213331	0	-	72161548	72213298	789624	3	126,179,145,	0,35262,51638,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	72161612	72204505	chr10:72161612-72204505	0	-	72198636	72204505	789624	5	62,179,217,98,84,	0,35198,36836,41814,42809,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	72180857	72180989	chr10:72180857-72180989	3	+	72180857	72180857	8553170	1	132,	0,
#Partially deleted in new
chr10	72189940	72190576	chr10:72189940-72190576	7	+	72189940	72189940	16724991	1	636,	0,
#Partially deleted in new
chr10	72196810	72216286	chr10:72196810-72216286	0	-	72196810	72210826	789624	5	179,98,100,91,80,	0,6616,13921,16376,19396,
#Partially deleted in new
chr10	72196842	72216276	chr10:72196842-72216276	0	-	72196842	72213298	789624	5	147,98,100,165,70,	0,6584,13889,16344,19364,
#Partially deleted in new
chr10	72196929	72216311	chr10:72196929-72216311	0	-	72196929	72213298	789624	6	60,98,100,145,73,105,	0,6497,13802,16257,18852,19277,
#Partially deleted in new
chr10	72203426	72215973	chr10:72203426-72215973	0	-	72203426	72213298	789624	4	98,100,145,197,	0,7305,9760,12350,
#Partially deleted in new
chr10	72210774	72216275	chr10:72210774-72216275	0	-	72210774	72213298	789624	4	57,145,328,69,	0,2412,5007,5432,
#Duplicated in new
chr10	72215999	72235858	chr10:72215999-72235858	1	+	72223914	72233116	789624	3	73,169,2858,	0,7888,17001,
#Duplicated in new
chr10	72215999	72235858	chr10:72215999-72235858	3	+	72223914	72233116	0	5	139,326,169,75,2858,	0,4054,7888,14366,17001,
#Partially deleted in new
chr10	72216028	72233615	chr10:72216028-72233615	0	+	72216028	72216028	8553170	3	44,75,615,	0,14337,16972,
#Duplicated in new
chr10	72216047	72235860	chr10:72216047-72235860	1	+	72223914	72233116	0	4	91,169,75,2860,	0,7840,14318,16953,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	72220751	72220852	chr10:72220751-72220852	3	+	72220751	72220751	8553170	1	101,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	72223132	72233829	chr10:72223132-72233829	0	+	72223132	72223132	8553170	3	924,75,829,	0,7233,9868,
#Deleted in new
chr10	72273919	72276036	chr10:72273919-72276036	3	+	72274216	72275188	0	3	141,265,1342,	0,237,775,
#Deleted in new
chr10	72273924	72274950	chr10:72273924-72274950	0	+	72273924	72273924	8553170	2	497,256,	0,770,
#Deleted in new
chr10	72274018	72274635	chr10:72274018-72274635	0	+	72274018	72274018	8553170	2	42,479,	0,138,
#Deleted in new
chr10	72274914	72275980	chr10:72274914-72275980	3	-	72274914	72274914	8553170	2	566,281,	0,785,
#Partially deleted in new
chr10	72332829	72355149	chr10:72332829-72355149	1	-	72335809	72354999	789624	8	3102,173,110,80,186,146,178,385,	0,3694,5372,7959,8155,10536,12120,21935,
#Partially deleted in new
chr10	72332829	72355149	chr10:72332829-72355149	1	-	72335809	72354999	789624	9	1788,152,173,110,80,186,146,178,385,	0,2950,3694,5372,7959,8155,10536,12120,21935,
#Partially deleted in new
chr10	72332830	72355230	chr10:72332830-72355230	3	-	72335809	72354897	789624	9	1787,152,173,110,80,186,146,178,466,	0,2949,3693,5371,7958,8154,10535,12119,21934,
#Partially deleted in new
chr10	72334080	72354380	chr10:72334080-72354380	1	-	72334587	72341012	789624	8	537,98,173,110,80,186,146,1039,	0,1753,2443,4121,6708,6904,9285,19261,
#Partially deleted in new
chr10	72334522	72344961	chr10:72334522-72344961	0	-	72335809	72344961	789624	7	1409,173,110,80,186,146,12,	0,2001,3679,6266,6462,8843,10427,
#Deleted in new
chr10	72335556	72336865	chr10:72335556-72336865	0	-	72335556	72335556	8553170	2	375,342,	0,967,
#Partially deleted in new
chr10	72367326	72626191	chr10:72367326-72626191	1	-	72368194	72566793	789624	12	1029,90,109,138,198,83,117,48,163,169,162,182,	0,8456,40602,55907,107773,109847,140828,166415,183852,195568,199306,258683,
#Partially deleted in new
chr10	72367339	72626105	chr10:72367339-72626105	3	-	72368194	72566793	0	12	1016,90,109,138,198,83,115,44,163,169,162,96,	0,8443,40589,55894,107760,109834,140815,166406,183839,195555,199293,258670,
#Partially deleted in new
chr10	72367339	72551198	chr10:72367339-72551198	0	-	72379551	72551198	789624	10	1016,90,120,109,138,198,83,115,44,20,	0,8443,12124,40589,55894,107760,109834,140815,166406,183839,
#Partially deleted in new
chr10	72367545	72626131	chr10:72367545-72626131	1	-	72368194	72566793	789624	13	810,90,109,138,198,83,115,12,44,163,169,162,122,	0,8237,40383,55688,107554,109628,140609,157189,166200,183633,195349,199087,258464,
#Partially deleted in new
chr10	72367545	72626131	chr10:72367545-72626131	1	-	72368194	72566793	789624	14	810,90,109,138,198,83,115,6,12,44,163,169,162,122,	0,8237,40383,55688,107554,109628,140609,141852,157189,166200,183633,195349,199087,258464,
#Partially deleted in new
chr10	72367913	72523953	chr10:72367913-72523953	1	-	72368194	72523859	0	7	442,90,109,138,198,83,152,	0,7869,40015,55320,107186,109260,155888,
#Partially deleted in new
chr10	72368110	72523936	chr10:72368110-72523936	1	-	72368194	72477550	0	9	245,90,109,138,198,83,111,115,135,	0,7672,39818,55123,106989,109063,109382,140044,155691,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	72391963	72392069	chr10:72391963-72392069	3	+	72391963	72391963	8553170	1	106,	0,
#Partially deleted in new
chr10	72423247	72523975	chr10:72423247-72523975	0	-	72423247	72523859	789624	4	124,198,83,174,	0,51852,53926,100554,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	72467748	72473304	chr10:72467748-72473304	3	-	72467748	72467748	8553170	2	197,282,	0,5274,
#Partially deleted in new
chr10	72477169	72626078	chr10:72477169-72626078	0	-	72477169	72566691	789624	7	87,115,44,163,169,127,69,	0,30985,56576,74009,85725,89463,148840,
#Partially deleted in new
chr10	72477173	72508625	chr10:72477173-72508625	0	-	72477173	72477173	8553170	2	83,471,	0,30981,
#Deleted in new
chr10	72483244	72483812	chr10:72483244-72483812	7	+	72483244	72483244	16724991	1	568,	0,
#Partially deleted in new
chr10	72501745	72502956	chr10:72501745-72502956	3	+	72501745	72501745	8553170	2	41,121,	0,1090,
#Deleted in new
chr10	72560263	72560456	chr10:72560263-72560456	7	+	72560263	72560263	16724991	1	193,	0,
#Partially deleted in new
chr10	72562710	72626074	chr10:72562710-72626074	0	-	72562710	72562710	8553170	3	353,162,65,	0,3922,63299,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	72582802	72583086	chr10:72582802-72583086	3	+	72582802	72582802	8553170	1	284,	0,
#Deleted in new
chr10	72636496	72636765	chr10:72636496-72636765	7	-	72636496	72636496	16724991	1	269,	0,
#Partially deleted in new
chr10	72643010	72644650	chr10:72643010-72644650	7	+	72643010	72643010	16724991	2	920,380,	0,1260,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	72654164	72654276	chr10:72654164-72654276	3	-	72654164	72654164	8553170	1	112,	0,
#Partially deleted in new
chr10	72692130	72887694	chr10:72692130-72887694	3	+	72692151	72885822	0	8	171,70,171,105,161,204,117,1950,	0,142228,167046,168292,176572,179246,192135,193614,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	72692142	72887694	chr10:72692142-72887694	1	+	72692151	72885822	0	8	159,70,171,105,98,204,117,1950,	0,142216,167034,168280,169536,179234,192123,193602,
#Partially deleted in new
chr10	72692142	72834420	chr10:72692142-72834420	0	+	72692151	72715863	789624	5	159,116,49,87,62,	0,22968,23711,44342,142216,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	72692142	72871433	chr10:72692142-72871433	0	+	72692151	72715868	789624	8	159,49,122,70,171,105,161,57,	0,23711,68408,142216,167034,168280,176560,179234,
#Partially deleted in new
chr10	72692142	72871545	chr10:72692142-72871545	0	+	72692151	72715192	789624	9	159,74,116,49,70,171,105,161,169,	0,16140,22968,23711,142216,167034,168280,176560,179234,
#Partially deleted in new
chr10	72692618	72887692	chr10:72692618-72887692	1	+	72693063	72885822	0	8	448,70,171,105,161,204,117,1948,	0,141740,166558,167804,176084,178758,191647,193126,
#Partially deleted in new
chr10	72692618	72887692	chr10:72692618-72887692	0	+	72692758	72693025	789624	8	448,70,171,105,161,204,117,1948,	0,141740,166558,167804,176084,178758,191647,193126,
#Partially deleted in new
chr10	72712303	72868812	chr10:72712303-72868812	0	+	72712358	72868812	789624	5	96,74,171,105,110,	0,122055,146873,148119,156399,
#Deleted in new
chr10	72721028	72721100	chr10:72721028-72721100	3	+	72721028	72721028	5263520	1	72,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	72730556	72731175	chr10:72730556-72731175	3	+	72730556	72730556	8553170	1	619,	0,
#Partially deleted in new
chr10	72756397	72757016	chr10:72756397-72757016	3	+	72756397	72756397	8553170	1	619,	0,
#Deleted in new
chr10	72766559	72767052	chr10:72766559-72767052	3	+	72766559	72766559	8553170	1	493,	0,
#Partially deleted in new
chr10	72859994	72868806	chr10:72859994-72868806	0	+	72859994	72859994	8553170	2	533,104,	0,8708,
#Partially deleted in new
chr10	72868689	72884431	chr10:72868689-72884431	0	+	72868689	72868689	8553170	3	174,204,166,	0,2687,15576,
#Partially deleted in new
chr10	72868843	72887691	chr10:72868843-72887691	0	+	72868843	72868843	8553170	4	20,204,117,1947,	0,2533,15422,16901,
#Partially deleted in new
chr10	72893580	72933033	chr10:72893580-72933033	3	+	72893798	72932524	789624	9	279,375,108,123,123,161,416,100,680,	0,5083,6796,13015,18136,19727,30648,36957,38773,
#Partially deleted in new
chr10	72893583	72932689	chr10:72893583-72932689	1	+	72893798	72930552	789624	8	276,375,108,123,123,161,100,336,	0,5080,6793,13012,18133,19724,36954,38770,
#Deleted in new
chr10	72917640	72918534	chr10:72917640-72918534	7	-	72917640	72917640	16724991	1	894,	0,
#Partially deleted in new
chr10	72935169	72954778	chr10:72935169-72954778	3	-	72935616	72954685	789624	4	569,166,89,304,	0,5999,7482,19305,
#Deleted in new
chr10	73005832	73006595	chr10:73005832-73006595	7	-	73005832	73005832	16724991	2	317,229,	0,534,
#Partially deleted in new
chr10	73007216	73096850	chr10:73007216-73096850	1	-	73008221	73074883	0	15	1076,97,69,66,50,104,71,177,197,240,138,152,97,108,85,	0,2590,3752,7007,9629,23050,37764,39708,43836,46134,61629,64812,66514,67591,89549,
#Partially deleted in new
chr10	73007216	73096850	chr10:73007216-73096850	1	-	73008221	73074883	0	15	1076,97,69,66,50,104,71,177,197,240,138,152,97,108,85,	0,2590,3752,7007,9629,23050,36670,39708,43836,46134,61629,64812,66514,67591,89549,
#Partially deleted in new
chr10	73007223	73096974	chr10:73007223-73096974	3	-	73008221	73074883	0	15	1069,97,69,66,54,100,71,177,197,240,138,152,97,108,209,	0,2583,3745,7000,9622,23047,36663,39701,43829,46127,61622,64805,66507,67584,89542,
#Partially deleted in new
chr10	73007223	73096974	chr10:73007223-73096974	1	-	73008221	73074883	0	15	1069,97,69,66,54,100,71,177,197,240,138,152,97,108,209,	0,2583,3745,7000,9622,23047,37757,39701,43829,46127,61622,64805,66507,67584,89542,
#Partially deleted in new
chr10	73007223	73096974	chr10:73007223-73096974	1	-	73008221	73074883	0	14	1069,97,69,66,100,71,177,197,240,138,152,97,108,209,	0,2583,3745,7000,23047,36663,39701,43829,46127,61622,64805,66507,67584,89542,
#Partially deleted in new
chr10	73009639	73016861	chr10:73009639-73016861	0	-	73009639	73009639	8553170	4	264,69,66,16,	0,1329,4584,7206,
#Deleted in new
chr10	73065125	73065467	chr10:73065125-73065467	7	+	73065125	73065125	16724991	3	61,71,82,	0,98,260,
#Partially deleted in new
chr10	73071294	73074008	chr10:73071294-73074008	3	+	73071294	73071294	8553170	2	63,228,	0,2486,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	73082493	73082595	chr10:73082493-73082595	3	-	73082493	73082493	8553170	1	102,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	73098043	73101297	chr10:73098043-73101297	3	-	73098043	73098043	8553170	2	1791,1214,	0,2040,
#Partially deleted in new
chr10	73110374	73131828	chr10:73110374-73131828	1	+	73125397	73130903	789624	9	193,92,72,140,135,126,112,155,1126,	0,3982,9076,9643,11800,14743,15023,16298,20328,
#Partially deleted in new
chr10	73110374	73131828	chr10:73110374-73131828	1	+	73124233	73130903	789624	10	193,92,72,140,135,107,126,112,155,1126,	0,3982,9076,9643,11800,13839,14743,15023,16298,20328,
#Partially deleted in new
chr10	73110374	73126657	chr10:73110374-73126657	1	+	73114365	73126657	789624	8	193,92,140,135,107,126,112,23,	0,3982,9643,11800,13839,14743,15023,16260,
#Partially deleted in new
chr10	73110458	73131828	chr10:73110458-73131828	1	+	73114365	73130903	789624	7	109,92,140,135,107,126,1126,	0,3898,9559,11716,13755,14659,20244,
#Partially deleted in new
chr10	73110458	73131828	chr10:73110458-73131828	3	+	73114365	73130903	789624	9	109,92,140,135,107,126,112,155,1126,	0,3898,9559,11716,13755,14659,14939,16214,20244,
#Partially deleted in new
chr10	73110458	73131828	chr10:73110458-73131828	0	+	73110458	73110458	789624	9	109,92,140,135,107,126,112,193,1126,	0,3898,9559,11716,13755,14659,14939,16176,20244,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	73110519	73115168	chr10:73110519-73115168	0	+	73110519	73110519	8553170	3	48,92,225,	0,3837,4424,
#Partially deleted in new
chr10	73110529	73131828	chr10:73110529-73131828	1	+	73114365	73126789	789624	8	38,92,140,135,107,126,155,1126,	0,3827,9488,11645,13684,14588,16143,20173,
#Deleted in new
chr10	73124572	73125405	chr10:73124572-73125405	3	-	73124572	73124572	8553170	1	833,	0,
#Deleted in new
chr10	73124900	73125532	chr10:73124900-73125532	0	-	73124900	73124900	8553170	1	632,	0,
#Deleted in new
chr10	73126079	73126207	chr10:73126079-73126207	3	-	73126079	73126079	5263520	1	128,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	73130154	73134754	chr10:73130154-73134754	0	-	73130349	73134754	789624	2	305,152,	0,4448,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	73133655	73168059	chr10:73133655-73168059	3	-	73134582	73163937	789624	14	1158,215,68,187,107,86,129,129,193,179,88,118,218,194,	0,3048,4347,5653,5975,12620,14620,18637,20600,22619,22912,26778,30077,34210,
#Partially deleted in new
chr10	73134523	73168071	chr10:73134523-73168071	1	-	73134582	73163937	789624	13	290,215,68,187,107,86,129,193,179,88,118,218,206,	0,2180,3479,4785,5107,11752,13752,19732,21751,22044,25910,29209,33342,
#Partially deleted in new
chr10	73134523	73167948	chr10:73134523-73167948	0	-	73152297	73160534	789624	12	290,215,68,187,107,86,129,129,179,88,118,83,	0,2180,3479,4785,5107,11752,13752,17769,21751,22044,25910,33342,
#Partially deleted in new
chr10	73152345	73168095	chr10:73152345-73168095	0	-	73152345	73160534	789624	6	76,193,179,88,118,230,	0,1910,3929,4222,8088,15520,
#Partially deleted in new
chr10	73154309	73168078	chr10:73154309-73168078	0	-	73154309	73163937	789624	6	139,179,10,118,218,213,	0,1965,2258,6124,9423,13556,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	73156588	73169055	chr10:73156588-73169055	0	-	73156588	73156588	8553170	4	67,118,218,178,	0,3845,7144,12289,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	73168165	73244504	chr10:73168165-73244504	3	+	73168339	73241019	789624	14	221,105,130,143,117,168,188,125,104,225,124,126,73,3559,	0,6521,9680,24390,25311,40453,42085,59894,62256,64773,66651,67027,71146,72780,
#Partially deleted in new
chr10	73177871	73235452	chr10:73177871-73235452	0	+	73177871	73235327	789624	10	104,143,117,168,188,101,104,225,124,260,	0,14684,15605,30747,32379,50188,52550,55067,56945,57321,
#Partially deleted in new
chr10	73183361	73245981	chr10:73183361-73245981	0	-	73183361	73183361	8553170	3	215,87,60,	0,60481,62560,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	73192222	73192325	chr10:73192222-73192325	3	-	73192222	73192222	8553170	1	103,	0,
#Partially deleted in new
chr10	73199825	73201225	chr10:73199825-73201225	7	+	73199825	73199825	16724991	2	207,863,	0,537,
#Partially deleted in new
chr10	73208691	73242180	chr10:73208691-73242180	0	+	73208691	73241019	789624	8	95,188,125,104,225,124,73,1235,	0,1559,19368,21730,24247,26125,30620,32254,
#Partially deleted in new
chr10	73210266	73235452	chr10:73210266-73235452	0	+	73210266	73233167	789624	6	172,125,104,259,124,260,	0,17793,20155,22672,24550,24926,
#Partially deleted in new
chr10	73228106	73235481	chr10:73228106-73235481	0	+	73228106	73228106	8553170	3	78,124,289,	0,6710,7086,
#Partially deleted in new
chr10	73230295	73235309	chr10:73230295-73235309	0	+	73230295	73230295	8553170	4	230,225,124,117,	0,2643,4521,4897,
#Deleted in new
chr10	73230472	73231306	chr10:73230472-73231306	0	+	73230472	73230472	8553170	1	834,	0,
#Partially deleted in new
chr10	73234107	73242181	chr10:73234107-73242181	0	+	73234107	73234107	8553170	3	1211,73,1236,	0,5204,6838,
#Partially deleted in new
chr10	73238769	73243398	chr10:73238769-73243398	0	-	73238769	73238769	8553170	3	609,99,54,	0,2892,4575,
#Partially deleted in new
chr10	73242823	73248862	chr10:73242823-73248862	3	-	73243399	73247189	789624	5	696,87,255,141,1853,	0,1019,3098,3864,4186,
#Deleted in new
chr10	73247341	73248268	chr10:73247341-73248268	0	-	73247341	73247341	8553170	2	163,460,	0,467,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	73247359	73276984	chr10:73247359-73276984	3	+	73247359	73247359	789624	4	24,158,146,2537,	0,933,25453,27088,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	73248382	73249358	chr10:73248382-73249358	0	+	73248382	73248382	8553170	2	68,395,	0,581,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	73248842	73252693	chr10:73248842-73252693	3	-	73250851	73252482	0	3	2149,261,224,	0,2920,3627,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	73248842	73252625	chr10:73248842-73252625	0	-	73248842	73248842	8553170	3	2149,275,156,	0,2920,3627,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	73248937	73252693	chr10:73248937-73252693	1	-	73249292	73252482	789624	3	381,261,224,	0,2825,3532,
#Partially deleted in new
chr10	73250740	73252404	chr10:73250740-73252404	0	-	73250740	73250740	8553170	3	251,261,146,	0,1022,1518,
#Partially deleted in new
chr10	73250743	73252634	chr10:73250743-73252634	0	-	73250743	73250743	8553170	3	248,261,103,	0,1019,1788,
#Deleted in new
chr10	73252790	73254349	chr10:73252790-73254349	3	+	73252790	73252790	789624	2	305,457,	0,1102,
#Deleted in new
chr10	73253031	73254344	chr10:73253031-73254344	1	+	73253031	73253031	789624	3	32,64,452,	0,159,861,
#Deleted in new
chr10	73253168	73254349	chr10:73253168-73254349	0	+	73253168	73253168	8553170	2	86,549,	0,632,
#Partially deleted in new
chr10	73253758	73358859	chr10:73253758-73358859	3	-	73253974	73354796	789624	28	297,48,102,90,162,153,122,159,219,116,134,126,132,191,65,92,81,171,135,100,95,183,180,80,99,187,102,82,	0,2610,15855,19169,20674,21687,23481,24420,37467,37881,38122,39504,43283,45148,45842,56399,58075,58714,69204,77418,81671,87640,91306,94397,94664,99797,100975,105019,
#Partially deleted in new
chr10	73253761	73358778	chr10:73253761-73358778	1	-	73253974	73354796	789624	12	294,48,102,90,118,38,180,80,99,187,102,65,	0,2607,15852,19166,20671,87782,91303,94394,94661,99794,100972,104952,
#Partially deleted in new
chr10	73253761	73358854	chr10:73253761-73358854	1	-	73253974	73299035	789624	28	294,48,102,90,162,153,122,159,219,116,134,126,132,191,61,92,81,171,135,100,95,183,180,80,99,187,102,77,	0,2607,15852,19166,20671,21684,23478,24417,37464,37878,38119,39501,43280,45145,45843,56396,58072,58711,69201,77415,81668,87637,91303,94394,94661,99794,100972,105016,
#Partially deleted in new
chr10	73253761	73297116	chr10:73253761-73297116	0	-	73253974	73297116	789624	12	294,48,102,162,153,122,159,219,116,134,126,75,	0,2607,15852,20671,21684,23478,24417,37464,37878,38119,39501,43280,
#Partially deleted in new
chr10	73253761	73291735	chr10:73253761-73291735	0	-	73253761	73253761	8553170	9	294,48,102,162,153,122,159,95,96,	0,2607,15852,20671,21684,23478,24417,37588,37878,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr10	73253761	73358754	chr10:73253761-73358754	0	-	73253761	73253761	8553170	22	294,48,162,153,219,116,134,3911,191,65,92,81,171,65,100,95,183,177,99,187,102,41,	0,2607,20671,21684,37464,37878,38119,39501,45145,45839,56396,58072,58711,69201,77415,81668,87637,91303,94661,99794,100972,104952,
#Partially deleted in new
chr10	73253761	73291735	chr10:73253761-73291735	0	-	73253761	73253761	8553170	10	294,48,102,90,162,153,122,159,95,96,	0,2607,15852,19166,20671,21684,23478,24417,37588,37878,
#Partially deleted in new
chr10	73253765	73291735	chr10:73253765-73291735	1	-	73253974	73277238	789624	9	290,48,102,162,140,130,159,95,96,	0,2603,15848,20667,21680,23466,24413,37584,37874,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	73279061	73279168	chr10:73279061-73279168	3	+	73279061	73279061	8553170	1	107,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	73375100	73414067	chr10:73375100-73414067	1	-	73376094	73400856	789624	13	1117,113,76,171,171,114,95,103,65,111,205,55,56,	0,3810,4778,4930,8074,8476,12588,13211,21418,22063,23080,25702,38911,
#Partially deleted in new
chr10	73375444	73414067	chr10:73375444-73414067	2	-	73376094	73400856	789624	14	773,113,76,171,171,114,95,103,66,65,111,205,55,56,	0,3466,4434,4586,7730,8132,12244,12867,20599,21074,21719,22736,25358,38567,
#Partially deleted in new
chr10	73381432	73383496	chr10:73381432-73383496	3	+	73381432	73381432	8553170	2	145,256,	0,1808,
#Partially deleted in new
chr10	73383260	73414076	chr10:73383260-73414076	0	-	73383260	73383260	8553170	8	85,114,95,103,65,111,205,65,	0,316,4428,5051,13258,13903,14920,30751,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	73396519	73408407	chr10:73396519-73408407	0	-	73396519	73400856	789624	5	64,111,205,55,213,	0,644,1661,4283,11675,
#Deleted in new
chr10	73422258	73422696	chr10:73422258-73422696	7	-	73422258	73422258	16724991	1	438,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	73423578	73433560	chr10:73423578-73433560	0	-	73425902	73428284	789624	7	1194,94,136,125,156,238,48,	0,1519,2232,3028,4034,4485,9934,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	73423580	73433561	chr10:73423580-73433561	3	-	73424552	73428284	789624	7	1192,94,567,125,156,238,49,	0,1517,2230,3026,4032,4483,9932,
#Partially deleted in new
chr10	73424428	73428287	chr10:73424428-73428287	1	-	73424552	73428284	789624	6	344,94,567,125,156,224,	0,669,1382,2178,3184,3635,
#Partially deleted in new
chr10	73436427	73496001	chr10:73436427-73496001	3	-	73438241	73495889	0	14	1993,30,98,82,78,126,95,78,140,146,112,125,201,197,	0,3444,8297,10064,17984,31125,34259,34459,34642,35040,38491,42071,42889,59377,
#Partially deleted in new
chr10	73436805	73496024	chr10:73436805-73496024	1	-	73438241	73495889	0	13	1615,98,85,78,126,95,78,140,146,112,125,201,220,	0,7919,9686,17606,30747,33881,34081,34264,34662,38113,41693,42511,58999,
#Partially deleted in new
chr10	73436805	73496024	chr10:73436805-73496024	1	-	73438241	73495889	0	14	1615,30,98,85,78,126,95,78,140,146,112,125,201,220,	0,3066,7919,9686,17606,30747,33881,34081,34264,34662,38113,41693,42511,58999,
#Partially deleted in new
chr10	73438197	73467619	chr10:73438197-73467619	0	-	73438241	73467619	789624	7	223,30,98,85,27,78,67,	0,1674,6527,8294,10466,16214,29355,
#Partially deleted in new
chr10	73443779	73495996	chr10:73443779-73495996	1	-	73444599	73495889	789624	12	1043,82,78,126,95,78,140,146,112,125,201,192,	0,2712,10632,23773,26907,27107,27290,27688,31139,34719,35537,52025,
#Partially deleted in new
chr10	73466957	73471577	chr10:73466957-73471577	0	-	73466957	73466957	8553170	5	721,95,78,140,110,	0,3729,3929,4112,4510,
#Deleted in new
chr10	73495524	73496778	chr10:73495524-73496778	1	+	73495524	73495524	8553170	2	293,637,	0,617,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	73496282	73507309	chr10:73496282-73507309	3	+	73496282	73496282	789624	4	201,93,89,2505,	0,3312,7901,8522,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	73496494	73498541	chr10:73496494-73498541	1	+	73496494	73496494	8553170	2	412,244,	0,1803,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	73496749	73499926	chr10:73496749-73499926	1	+	73496749	73496749	8553170	2	157,332,	0,2845,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr10	73497537	73625650	chr10:73497537-73625650	3	-	73498628	73575658	789624	23	1651,184,141,119,1373,196,120,168,134,232,381,132,171,169,150,147,106,83,114,135,93,164,84,	0,3117,7312,7770,18837,22259,23370,26045,29109,32142,32605,33166,37062,38731,41906,43837,44095,45265,45480,48000,73883,77974,128029,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	73497537	73530831	chr10:73497537-73530831	0	-	73517715	73530831	789624	9	1651,184,119,1373,168,134,232,381,128,	0,3117,7770,18837,26045,29109,32142,32605,33166,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr10	73497537	73541702	chr10:73497537-73541702	0	-	73517715	73541702	789624	15	1651,184,119,1373,120,168,134,232,381,132,171,169,150,147,70,	0,3117,7770,18837,23370,26045,29109,32142,32605,33166,37062,38731,41906,43837,44095,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	73497537	73534770	chr10:73497537-73534770	0	-	73517715	73534770	789624	11	1651,184,141,119,1373,120,168,134,232,381,171,	0,3117,7312,7770,18837,23370,26045,29109,32142,32605,37062,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr10	73498294	73553340	chr10:73498294-73553340	0	-	73498294	73498294	789624	18	894,184,141,104,1373,168,134,232,381,132,169,150,147,106,83,114,135,126,	0,2360,6555,7028,18080,25288,28352,31385,31848,32409,37974,41149,43080,43338,44508,44723,47243,54920,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	73498366	73526757	chr10:73498366-73526757	1	-	73498628	73517689	789624	6	822,184,119,1373,168,111,	0,2288,6941,18008,25216,28280,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	73498555	73499827	chr10:73498555-73499827	0	+	73498555	73498555	8553170	2	312,233,	0,1039,
#Partially deleted in new
chr10	73500654	73505196	chr10:73500654-73505196	0	-	73500654	73500654	8553170	2	184,347,	0,4195,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr10	73518721	73576337	chr10:73518721-73576337	0	-	73518721	73518721	8553170	18	1271,120,168,134,232,381,132,171,169,150,147,106,83,114,135,93,164,543,	0,2186,4861,7925,10958,11421,11982,15878,17547,20722,22653,22911,24081,24296,26816,52699,56790,57073,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	73529050	73529157	chr10:73529050-73529157	3	-	73529050	73529050	8553170	1	107,	0,
#Deleted in new
chr10	73529540	73530411	chr10:73529540-73530411	0	-	73529540	73529540	8553170	2	371,269,	0,602,
#Partially deleted in new
chr10	73536200	73575658	chr10:73536200-73575658	0	-	73536200	73536200	8553170	9	237,150,147,106,83,114,135,93,147,	0,3243,5174,5432,6602,6817,9337,35220,39311,
#Partially deleted in new
chr10	73537802	73538391	chr10:73537802-73538391	7	+	73537802	73537802	16724991	2	115,169,	0,420,
#Partially deleted in new
chr10	73539537	73591338	chr10:73539537-73591338	0	-	73539537	73575658	789624	5	56,135,93,164,61,	0,6000,31883,35974,51740,
#Deleted in new
chr10	73541428	73541892	chr10:73541428-73541892	0	-	73541428	73541428	8553170	2	93,260,	0,204,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	73542834	73546636	chr10:73542834-73546636	0	-	73542834	73542834	8553170	4	51,114,135,103,	0,183,2703,3699,
#Partially deleted in new
chr10	73543045	73591342	chr10:73543045-73591342	0	-	73543045	73575658	789624	5	86,135,93,164,65,	0,2492,28375,32466,48232,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	73571420	73625953	chr10:73571420-73625953	0	-	73571420	73575658	789624	5	93,164,226,100,17,	0,4091,4715,34948,54516,
#Partially deleted in new
chr10	73575809	73591540	chr10:73575809-73591540	0	-	73575809	73575809	8553170	2	552,263,	0,15468,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	73625995	73626790	chr10:73625995-73626790	3	+	73625995	73625995	8553170	1	795,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	73630555	73631490	chr10:73630555-73631490	3	+	73630555	73630555	8553170	1	935,	0,
#Partially deleted in new
chr10	73631653	73641757	chr10:73631653-73641757	3	-	73631929	73640017	789624	6	508,166,250,179,91,347,	0,2246,2830,6090,8291,9757,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	73644880	73651029	chr10:73644880-73651029	1	-	73646717	73651007	789624	2	3999,122,	0,6027,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	73644880	73656072	chr10:73644880-73656072	3	-	73646717	73655922	789624	4	3999,515,152,255,	0,8258,9248,10937,
#Partially deleted in new
chr10	73653358	73663803	chr10:73653358-73663803	0	-	73653358	73654178	789624	3	295,152,104,	0,770,10341,
#Partially deleted in new
chr10	73654038	73668028	chr10:73654038-73668028	1	+	73654038	73654038	8553170	2	268,303,	0,13687,
#Partially deleted in new
chr10	73654099	73674719	chr10:73654099-73674719	3	+	73654099	73654099	8553170	3	207,87,147,	0,14175,20473,
#Partially deleted in new
chr10	73674284	73698159	chr10:73674284-73698159	1	-	73674598	73697755	789624	8	1790,52,36,101,35,71,67,627,	0,2434,5786,8409,17758,20451,22812,23248,
#Partially deleted in new
chr10	73674286	73697881	chr10:73674286-73697881	1	-	73674598	73697755	789624	7	1788,52,36,101,35,69,349,	0,2432,5784,8407,17756,20449,23246,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr10	73674294	73730466	chr10:73674294-73730466	3	-	73674294	73674294	8553170	19	1780,52,36,101,35,69,69,188,93,135,151,140,122,143,189,80,190,209,28,	0,2424,5776,8399,17748,20441,22800,23238,30691,38903,43720,44865,46243,47067,48094,51666,52998,54084,56144,
#Partially deleted in new
chr10	73674377	73697867	chr10:73674377-73697867	3	-	73674598	73697755	789624	8	1697,52,36,101,35,69,69,335,	0,2341,5693,8316,17665,20358,22717,23155,
#Partially deleted in new
chr10	73676719	73682769	chr10:73676719-73682769	0	-	73681334	73682769	789624	4	51,36,334,76,	0,3351,4288,5974,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	73699150	73730487	chr10:73699150-73730487	3	-	73699150	73699150	5263520	12	438,93,129,151,140,122,143,189,80,190,209,29,	0,5835,14053,18864,20009,21387,22211,23238,26810,28142,29228,31308,
#Partially deleted in new
chr10	73703734	73713509	chr10:73703734-73713509	3	-	73703734	73703734	8553170	3	632,93,306,	0,1251,9469,
#Partially deleted in new
chr10	73704896	73713581	chr10:73704896-73713581	0	-	73704896	73704896	8553170	2	182,378,	0,8307,
#Deleted in new
chr10	73706489	73706613	chr10:73706489-73706613	7	+	73706489	73706489	16724991	1	124,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	73715842	73730469	chr10:73715842-73730469	7	-	73715842	73715842	16724991	10	338,151,140,122,143,189,80,190,209,154,	0,2172,3317,4695,5519,6546,10118,11450,12536,14473,
#Partially deleted in new
chr10	73717114	73728580	chr10:73717114-73728580	5	-	73717114	73717114	16724991	9	78,140,188,122,143,189,80,190,202,	0,2045,2892,3423,4247,5274,8846,10178,11264,
#Deleted in new
chr10	73730561	73731771	chr10:73730561-73731771	5	+	73730561	73730561	16724991	2	312,584,	0,626,
#Partially deleted in new
chr10	73731175	73737311	chr10:73731175-73737311	7	+	73731175	73731175	16724991	3	80,56,64,	0,4387,6072,
#Deleted in new
chr10	73731823	73733638	chr10:73731823-73733638	7	+	73731823	73731823	16724991	1	1815,	0,
#Partially deleted in new
chr10	73740537	73740823	chr10:73740537-73740823	7	-	73740537	73740537	16724991	1	286,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	73742994	73744230	chr10:73742994-73744230	3	-	73742994	73742994	8553170	1	1236,	0,
#Partially deleted in new
chr10	73744383	73772161	chr10:73744383-73772161	3	+	73746832	73771095	0	23	54,200,136,173,369,137,112,128,139,116,125,192,94,117,171,97,146,139,119,180,192,90,1207,	0,2421,6724,15238,15634,16329,19106,19472,21067,21416,21702,21966,22376,22670,23453,24426,24623,24963,25231,25452,25896,26325,26571,
#Partially deleted in new
chr10	73744383	73772159	chr10:73744383-73772159	0	+	73746832	73770546	789624	22	54,200,136,173,369,137,112,128,139,116,125,192,94,117,171,97,146,139,119,180,519,1205,	0,2421,6724,15238,15634,16329,19106,19472,21067,21416,21702,21966,22376,22670,23453,24426,24623,24963,25231,25452,25896,26571,
#Partially deleted in new
chr10	73744390	73772161	chr10:73744390-73772161	1	+	73746832	73771095	0	24	47,87,200,136,173,369,137,112,128,139,116,125,192,94,117,171,97,146,139,119,180,192,90,1207,	0,2239,2414,6717,15231,15627,16322,19099,19465,21060,21409,21695,21959,22369,22663,23446,24419,24616,24956,25224,25445,25889,26318,26564,
#Partially deleted in new
chr10	73744399	73771235	chr10:73744399-73771235	0	+	73746832	73760215	789624	23	38,200,173,369,137,69,112,128,139,116,125,192,94,117,171,97,146,139,119,180,192,90,281,	0,2405,15222,15618,16313,17698,19090,19456,21051,21400,21686,21950,22360,22654,23437,24410,24607,24947,25215,25436,25880,26309,26555,
#Partially deleted in new
chr10	73746866	73752102	chr10:73746866-73752102	0	+	73746866	73746866	8553170	3	138,136,386,	0,4241,4850,
#Deleted in new
chr10	73760109	73763555	chr10:73760109-73763555	0	+	73760109	73763555	789624	4	277,137,69,66,	0,603,1988,3380,
#Partially deleted in new
chr10	73767893	73770379	chr10:73767893-73770379	0	+	73767893	73767893	8553170	6	38,97,146,387,180,100,	0,916,1113,1453,1942,2386,
#Deleted in new
chr10	73769263	73772862	chr10:73769263-73772862	3	-	73769263	73769263	8553170	1	3599,	0,
#Partially deleted in new
chr10	73772290	73776219	chr10:73772290-73776219	3	+	73772333	73775685	789624	3	751,626,679,	0,899,3250,
#Partially deleted in new
chr10	73772290	73776216	chr10:73772290-73776216	1	+	73772333	73775515	789624	3	751,626,798,	0,899,3128,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	73772563	73775123	chr10:73772563-73775123	0	+	73772563	73772563	8553170	2	478,1930,	0,630,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	73773604	73780251	chr10:73773604-73780251	0	+	73773604	73773604	8553170	2	211,1424,	0,5223,
#Deleted in new
chr10	73782046	73783371	chr10:73782046-73783371	1	+	73782075	73782492	789624	2	153,1049,	0,276,
#Deleted in new
chr10	73782062	73783652	chr10:73782062-73783652	3	+	73782075	73783187	0	3	137,119,579,	0,260,1011,
#Partially deleted in new
chr10	73785581	73801792	chr10:73785581-73801792	1	+	73785878	73801519	789624	26	505,154,95,173,108,82,121,202,176,994,132,180,184,99,125,241,159,229,290,224,489,160,177,120,179,477,	0,3088,3514,3785,4135,4374,4590,5393,5742,6277,8006,8283,8565,8959,9957,11192,11531,11795,12199,12648,13420,14429,14714,15058,15435,15734,
#Partially deleted in new
chr10	73785623	73801797	chr10:73785623-73801797	3	+	73785878	73801519	789624	26	463,154,95,173,108,82,121,202,176,994,132,180,184,99,125,241,159,229,290,224,489,184,177,120,179,482,	0,3046,3472,3743,4093,4332,4548,5351,5700,6235,7964,8241,8523,8917,9915,11150,11489,11753,12157,12606,13378,14387,14672,15016,15393,15692,
#Partially deleted in new
chr10	73785623	73801792	chr10:73785623-73801792	1	+	73785878	73801519	789624	27	463,154,95,173,108,82,121,202,176,632,263,132,180,184,84,125,241,159,229,290,224,489,160,177,120,179,477,	0,3046,3472,3743,4093,4332,4548,5351,5700,6235,6966,7964,8241,8523,8932,9915,11150,11489,11753,12157,12606,13378,14387,14672,15016,15393,15692,
#Deleted in new
chr10	73785654	73786679	chr10:73785654-73786679	0	+	73785654	73785654	8553170	1	1025,	0,
#Partially deleted in new
chr10	73785655	73801793	chr10:73785655-73801793	1	+	73785878	73801519	789624	26	431,154,95,173,108,82,121,202,176,994,132,180,184,84,125,241,159,229,290,224,52,75,177,120,179,478,	0,3014,3440,3711,4061,4300,4516,5319,5668,6203,7932,8209,8491,8900,9883,11118,11457,11721,12125,12574,13346,14464,14640,14984,15361,15660,
#Partially deleted in new
chr10	73785661	73801792	chr10:73785661-73801792	1	+	73785878	73801519	789624	26	425,154,95,173,108,82,121,202,176,994,132,180,184,84,125,241,159,229,290,224,489,184,177,120,179,477,	0,3008,3434,3705,4055,4294,4510,5313,5662,6197,7926,8203,8485,8894,9877,11112,11451,11715,12119,12568,13340,14349,14634,14978,15355,15654,
#Partially deleted in new
chr10	73785682	73801608	chr10:73785682-73801608	0	+	73785878	73798305	789624	26	404,154,95,173,108,82,121,202,176,994,111,180,184,99,125,241,159,233,290,224,489,160,177,120,179,293,	0,2987,3413,3684,4034,4273,4489,5292,5641,6176,7905,8182,8464,8858,9856,11091,11430,11694,12098,12547,13319,14328,14613,14957,15334,15633,
#Deleted in new
chr10	73789501	73790256	chr10:73789501-73790256	0	+	73789501	73789501	8553170	4	38,108,82,85,	0,215,454,670,
#Deleted in new
chr10	73791217	73791490	chr10:73791217-73791490	3	+	73791217	73791217	8553170	1	273,	0,
#Partially deleted in new
chr10	73791323	73801793	chr10:73791323-73801793	0	+	73791323	73798305	789624	18	176,994,132,180,184,84,125,241,159,229,135,224,489,184,177,120,179,478,	0,535,2264,2541,2823,3232,4215,5450,5789,6053,6612,6906,7678,8687,8972,9316,9693,9992,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	73792049	73794943	chr10:73792049-73794943	0	+	73792049	73792049	8553170	5	803,132,180,184,388,	0,1538,1815,2097,2506,
#Partially deleted in new
chr10	73792521	73801792	chr10:73792521-73801792	0	+	73792521	73801776	789624	17	331,132,180,184,84,125,241,159,229,290,224,489,160,177,120,111,477,	0,1066,1343,1625,2034,3017,4252,4591,4855,5259,5708,6480,7489,7774,8118,8563,8794,
#Partially deleted in new
chr10	73792730	73801792	chr10:73792730-73801792	0	+	73792730	73801519	789624	17	122,132,180,184,99,125,241,159,229,290,224,489,184,177,120,179,477,	0,857,1134,1416,1810,2808,4043,4382,4646,5050,5499,6271,7280,7565,7909,8286,8585,
#Partially deleted in new
chr10	73792758	73801581	chr10:73792758-73801581	0	+	73792758	73801519	789624	17	94,132,180,184,99,125,262,159,229,290,224,489,160,177,120,179,266,	0,829,1106,1388,1782,2780,3994,4354,4618,5022,5471,6243,7252,7537,7881,8258,8557,
#Deleted in new
chr10	73796370	73797450	chr10:73796370-73797450	0	+	73796370	73796370	8553170	4	33,241,159,74,	0,403,742,1006,
#Partially deleted in new
chr10	73796513	73801399	chr10:73796513-73801399	3	-	73796513	73796513	789624	4	1076,267,57,60,	0,1308,3989,4826,
#Partially deleted in new
chr10	73796513	73811651	chr10:73796513-73811651	3	-	73802714	73808388	789624	17	1076,238,57,1437,73,171,175,124,97,183,129,186,155,88,1346,105,178,	0,1308,3989,4826,6495,6675,7060,7379,8259,9073,9386,9775,10143,10594,10870,14285,14960,
#Partially deleted in new
chr10	73797128	73803077	chr10:73797128-73803077	0	-	73802714	73803077	789624	4	461,238,103,69,	0,693,5545,5880,
#Partially deleted in new
chr10	73799061	73801166	chr10:73799061-73801166	0	+	73799061	73799061	8553170	6	97,114,184,177,120,150,	0,315,949,1234,1578,1955,
#Partially deleted in new
chr10	73799073	73800935	chr10:73799073-73800935	0	+	73799073	73799073	8553170	2	426,156,	0,1706,
#Partially deleted in new
chr10	73799309	73800795	chr10:73799309-73800795	0	+	73799309	73799309	8553170	4	181,160,177,156,	0,701,986,1330,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	73799632	73800894	chr10:73799632-73800894	0	+	73799632	73799632	8553170	3	538,177,255,	0,663,1007,
#Deleted in new
chr10	73800121	73801432	chr10:73800121-73801432	0	+	73800121	73800121	8553170	4	73,177,556,117,	0,174,518,1194,
#Deleted in new
chr10	73800718	73801793	chr10:73800718-73801793	0	+	73800718	73801776	789624	3	41,111,478,	0,366,597,
#Deleted in new
chr10	73800906	73801492	chr10:73800906-73801492	0	+	73800906	73800906	8553170	2	289,177,	0,409,
#Partially deleted in new
chr10	73801910	73808731	chr10:73801910-73808731	1	-	73802450	73808388	789624	13	666,103,110,171,175,124,97,183,129,186,155,88,1348,	0,763,1061,1278,1663,1982,2862,3676,3989,4378,4746,5197,5473,
#Partially deleted in new
chr10	73801910	73811584	chr10:73801910-73811584	3	-	73802450	73808388	789624	15	666,103,110,171,175,124,97,183,129,186,155,88,1346,105,111,	0,763,1061,1278,1663,1982,2862,3676,3989,4378,4746,5197,5473,8888,9563,
#Deleted in new
chr10	73802595	73803344	chr10:73802595-73803344	0	-	73802595	73803344	789624	3	181,110,156,	0,376,593,
#Partially deleted in new
chr10	73802714	73808388	chr10:73802714-73808388	1	-	73802714	73808388	789624	12	62,73,171,175,124,97,183,129,186,155,88,1005,	0,294,474,859,1178,2058,2872,3185,3574,3942,4393,4669,
#Deleted in new
chr10	73806875	73807524	chr10:73806875-73807524	0	-	73806875	73806875	8553170	2	320,141,	0,508,
#Deleted in new
chr10	73808466	73809076	chr10:73808466-73809076	0	-	73808466	73808466	8553170	2	263,264,	0,346,
#Deleted in new
chr10	73810683	73811798	chr10:73810683-73811798	0	-	73810683	73810683	8553170	2	220,325,	0,790,
#Partially deleted in new
chr10	73812500	73874580	chr10:73812500-73874580	1	-	73815014	73874461	0	21	2005,245,95,76,49,45,33,44,63,43,84,123,95,84,103,73,66,55,60,95,184,	0,2502,4522,4978,9181,11539,15588,24967,27038,29668,29957,34724,35487,36025,36512,36760,39753,40691,48329,60488,61896,
#Partially deleted in new
chr10	73812500	73874591	chr10:73812500-73874591	3	-	73815014	73874461	789624	21	2005,245,95,76,114,49,45,69,44,43,84,123,95,84,103,73,66,55,60,95,195,	0,2502,4522,4978,7031,9181,11539,12778,24967,29668,29957,34724,35487,36025,36512,36760,39753,40691,48329,60488,61896,
#Partially deleted in new
chr10	73812500	73874519	chr10:73812500-73874519	1	-	73815014	73874461	0	19	2005,245,95,76,49,45,44,43,84,123,95,84,103,73,66,55,60,95,123,	0,2502,4522,4978,9181,11539,24967,29668,29957,34724,35487,36025,36512,36760,39753,40691,48329,60488,61896,
#Partially deleted in new
chr10	73812500	73874591	chr10:73812500-73874591	1	-	73815014	73874461	0	21	2005,245,95,76,49,45,69,44,63,43,84,123,95,84,103,73,66,55,60,95,195,	0,2502,4522,4978,9181,11539,12778,24967,27038,29668,29957,34724,35487,36025,36512,36760,39753,40691,48329,60488,61896,
#Partially deleted in new
chr10	73812500	73874591	chr10:73812500-73874591	1	-	73815014	73874461	0	22	2005,245,95,76,83,53,45,69,33,44,43,84,123,95,84,103,73,66,55,60,95,195,	0,2502,4522,4978,7031,9177,11539,12778,15588,24967,29668,29957,34724,35487,36025,36512,36760,39753,40691,48329,60488,61896,
#Deleted in new
chr10	73813517	73814737	chr10:73813517-73814737	3	+	73813517	73813517	8553170	2	136,309,	0,911,
#Partially deleted in new
chr10	73814261	73860854	chr10:73814261-73860854	0	-	73815014	73860854	789624	18	244,245,95,76,49,45,69,44,43,84,123,95,84,103,73,66,55,25,	0,741,2761,3217,7420,9778,11017,23206,27907,28196,32963,33726,34264,34751,34999,37992,38930,46568,
#Partially deleted in new
chr10	73814287	73874461	chr10:73814287-73874461	1	-	73815014	73874461	0	21	218,245,95,76,49,45,69,33,44,43,84,123,95,84,103,73,66,55,60,95,65,	0,715,2735,3191,7394,9752,10991,13801,23180,27881,28170,32937,33700,34238,34725,34973,37966,38904,46542,58701,60109,
#Partially deleted in new
chr10	73814287	73874502	chr10:73814287-73874502	1	-	73815014	73874461	789624	20	218,245,95,76,49,45,44,63,43,84,123,95,84,103,73,66,55,60,95,106,	0,715,2735,3191,7394,9752,23180,25251,27881,28170,32937,33700,34238,34725,34973,37966,38904,46542,58701,60109,
#Partially deleted in new
chr10	73814299	73848018	chr10:73814299-73848018	0	-	73815014	73848018	789624	13	206,245,95,76,114,49,45,69,44,43,84,123,31,	0,703,2723,3179,5232,7382,9740,10979,23168,27869,28158,32925,33688,
#Partially deleted in new
chr10	73814415	73874554	chr10:73814415-73874554	0	-	73814415	73814415	8553170	22	90,245,95,76,687,114,49,45,69,44,63,43,84,123,95,84,103,73,60,95,134,158,	0,587,2607,3063,3793,5116,7266,9624,10863,23052,25123,27753,28042,32809,33572,34110,34597,34845,46414,58573,58974,59981,
#Partially deleted in new
chr10	73815200	73842211	chr10:73815200-73842211	0	-	73815200	73815200	8553170	9	47,95,76,86,49,45,27,44,43,	0,1822,2278,4331,6481,8839,10120,22267,26968,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	73815866	73817782	chr10:73815866-73817782	0	-	73815866	73815866	8553170	2	1251,304,	0,1612,
#Partially deleted in new
chr10	73837013	73848012	chr10:73837013-73848012	0	-	73837013	73837013	8553170	5	498,43,84,123,25,	0,5155,5444,10211,10974,
#Partially deleted in new
chr10	73841832	73847115	chr10:73841832-73847115	3	+	73841832	73841832	8553170	2	85,781,	0,4502,
#Partially deleted in new
chr10	73847224	73852816	chr10:73847224-73852816	0	-	73847224	73847224	8553170	7	123,95,84,103,73,66,203,	0,763,1301,1788,2036,5029,5389,
#Partially deleted in new
chr10	73909176	73913049	chr10:73909176-73913049	0	+	73911555	73913049	789624	5	118,88,28,108,126,	0,2348,2864,3038,3747,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	73909968	73922777	chr10:73909968-73922777	0	-	73909968	73909968	8553170	5	2127,85,33,123,145,	0,2231,3074,6550,12664,
#Partially deleted in new
chr10	73909977	73916642	chr10:73909977-73916642	3	-	73911684	73912244	789624	4	2118,85,33,124,	0,2222,3065,6541,
#Partially deleted in new
chr10	73910604	73911539	chr10:73910604-73911539	0	+	73910604	73910604	8553170	2	145,15,	0,920,
#Partially deleted in new
chr10	73911103	73917496	chr10:73911103-73917496	1	+	73911891	73916565	789624	10	115,401,108,175,92,220,149,141,149,1108,	0,421,1111,1820,2186,2435,2876,3672,4147,5285,
#Partially deleted in new
chr10	73911146	73913753	chr10:73911146-73913753	0	+	73911146	73911146	8553170	6	72,88,108,175,92,215,	0,378,1068,1777,2143,2392,
#Partially deleted in new
chr10	73911156	73917497	chr10:73911156-73917497	3	+	73911555	73916565	789624	11	62,88,28,108,175,92,220,149,141,149,1109,	0,368,884,1058,1767,2133,2382,2823,3619,4094,5232,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr10	73995192	74120160	chr10:73995192-74120160	0	+	73995192	73995192	8553170	23	39,40,47,71,151,109,123,3006,91,148,154,176,191,200,129,150,109,303,125,186,204,105,2138,	0,1989,21639,47890,75477,75782,77537,79550,87261,88173,94003,94830,99078,100463,102011,105755,108627,109858,112037,113778,118991,119602,122830,
#Partially deleted in new
chr10	73998113	74120160	chr10:73998113-74120160	3	+	73998207	74118169	0	22	262,71,151,109,123,161,91,148,154,176,191,200,129,150,109,303,125,186,204,204,105,2138,	0,44969,72556,72861,74616,76629,84340,85252,91082,91909,96157,97542,99090,102834,105706,106937,109116,110857,113795,116070,116681,119909,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr10	73998113	74121363	chr10:73998113-74121363	1	+	73998207	74118169	0	21	262,71,151,109,123,161,91,148,154,176,191,200,129,150,109,303,125,186,204,105,3341,	0,44969,72556,72861,74616,76629,84340,85252,91082,91909,96157,97542,99090,102834,105706,106937,109116,110857,116070,116681,119909,
#Partially deleted in new
chr10	73998113	74118048	chr10:73998113-74118048	0	+	73998207	74070675	789624	21	262,151,109,123,161,91,148,154,176,191,200,129,150,109,303,125,186,204,204,105,26,	0,72556,72861,74616,76629,84340,85252,91082,91909,96157,97542,99090,102834,105706,106937,109116,110857,113795,116070,116681,119909,
#Partially deleted in new
chr10	73998115	74105293	chr10:73998115-74105293	0	+	73998115	73998115	8553170	5	260,71,44,109,243,	0,44967,102938,105704,106935,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	74005136	74027915	chr10:74005136-74027915	3	+	74005136	74005136	8553170	2	144,298,	0,22481,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	74043090	74063890	chr10:74043090-74063890	0	+	74043090	74043090	8553170	2	63,205,	0,20595,
#Partially deleted in new
chr10	74104927	74108975	chr10:74104927-74108975	0	+	74104927	74104927	8553170	3	426,125,5,	0,2302,4043,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	74120254	74151063	chr10:74120254-74151063	3	-	74123809	74138379	789624	9	3656,145,208,134,86,138,172,276,309,	0,4125,5893,8853,9652,13772,16377,17852,30500,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	74122963	74150842	chr10:74122963-74150842	1	-	74123809	74138379	789624	10	947,145,208,134,86,138,172,276,126,88,	0,1416,3184,6144,6943,11063,13668,15143,15842,27791,
#Partially deleted in new
chr10	74128877	74130004	chr10:74128877-74130004	0	-	74128877	74128877	8553170	2	364,98,	0,1029,
#Partially deleted in new
chr10	74138255	74150757	chr10:74138255-74150757	0	-	74138255	74138255	8553170	2	127,423,	0,12079,
#Partially deleted in new
chr10	74151184	74709299	chr10:74151184-74709299	1	+	74151278	74708445	0	10	159,75,54,79,173,109,36,115,87,979,	0,49579,73353,163482,242956,247286,438097,449194,518998,557136,
#Partially deleted in new
chr10	74151228	74708475	chr10:74151228-74708475	3	+	74151278	74708445	0	11	115,75,54,79,173,109,171,36,115,87,155,	0,49535,73309,163438,242912,247242,374027,438053,449150,518954,557092,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	74151234	74224593	chr10:74151234-74224593	0	+	74151234	74151234	8553170	4	109,203,75,56,	0,23181,49529,73303,
#Partially deleted in new
chr10	74176488	74709299	chr10:74176488-74709299	1	+	74176872	74708445	0	10	398,75,79,173,109,171,36,115,87,979,	0,24275,138178,217652,221982,348767,412793,423890,493694,531832,
#Partially deleted in new
chr10	74176685	74709303	chr10:74176685-74709303	1	+	74176872	74708445	0	11	201,75,54,79,173,109,171,36,115,87,983,	0,24078,47852,137981,217455,221785,348570,412596,423693,493497,531635,
#Deleted in new
chr10	74344549	74344805	chr10:74344549-74344805	7	-	74344549	74344549	16724991	1	256,	0,
#Deleted in new
chr10	74371534	74372416	chr10:74371534-74372416	7	+	74371534	74371534	16724991	1	882,	0,
#Deleted in new
chr10	74423434	74424014	chr10:74423434-74424014	7	-	74423434	74423434	16724991	1	580,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	74509352	74529318	chr10:74509352-74529318	0	-	74509352	74509352	8553170	4	157,179,227,26,	0,7370,18413,19940,
#Partially deleted in new
chr10	74525363	74528299	chr10:74525363-74528299	0	+	74525363	74525363	8553170	2	63,540,	0,2396,
#Deleted in new
chr10	74527583	74527947	chr10:74527583-74527947	7	+	74527583	74527583	16724991	1	364,	0,
#Partially deleted in new
chr10	74527765	74530553	chr10:74527765-74530553	0	-	74527765	74527765	8553170	2	227,47,	0,2741,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	74551391	74551493	chr10:74551391-74551493	3	+	74551391	74551391	8553170	1	102,	0,
#Deleted in new
chr10	74641409	74641776	chr10:74641409-74641776	7	-	74641409	74641409	16724991	1	367,	0,
#Deleted in new
chr10	74654955	74656131	chr10:74654955-74656131	7	+	74654955	74654955	16724991	1	1176,	0,
#Partially deleted in new
chr10	74744385	74744707	chr10:74744385-74744707	7	-	74744385	74744385	16724991	1	322,	0,
#Deleted in new
chr10	74821609	74822130	chr10:74821609-74822130	3	-	74821609	74821609	8553170	1	521,	0,
#Partially deleted in new
chr10	74824926	74842972	chr10:74824926-74842972	0	+	74842857	74842972	8553170	3	434,70,373,	0,13756,17673,
#Partially deleted in new
chr10	74824935	75032284	chr10:74824935-75032284	3	+	74842857	75031046	8553170	18	421,70,879,109,116,82,133,932,122,116,142,162,94,232,160,351,292,3796,	0,13747,17664,135034,144724,145084,147571,150463,152380,154288,156851,160144,164083,195646,196190,196945,200022,203553,
#Partially deleted in new
chr10	74825254	75022123	chr10:74825254-75022123	0	+	74842857	75022123	8553170	16	102,101,879,109,116,82,133,56,122,116,142,162,94,232,160,243,	0,13428,17345,134715,144405,144765,147252,150144,152061,153969,156532,159825,163764,195327,195871,196626,
#Partially deleted in new
chr10	74825483	75032237	chr10:74825483-75032237	1	+	74842857	75031046	8553170	17	52,879,109,116,82,133,56,122,116,142,162,94,232,160,351,292,3749,	0,17116,134486,144176,144536,147023,149915,151832,153740,156303,159596,163535,195098,195642,196397,199474,203005,
#Partially deleted in new
chr10	74825491	75032221	chr10:74825491-75032221	1	+	74842857	75031046	8553170	18	183,70,879,109,116,82,133,932,122,116,142,162,94,232,160,351,292,3733,	0,13191,17108,134478,144168,144528,147015,149907,151824,153732,156295,159588,163527,195090,195634,196389,199466,202997,
#Partially deleted in new
chr10	74825498	75032293	chr10:74825498-75032293	1	+	74842857	75031046	0	17	176,879,109,116,82,133,56,122,116,142,162,94,232,160,351,292,3805,	0,17101,134471,144161,144521,147008,149900,151817,153725,156288,159581,163520,195083,195627,196382,199459,202990,
#Partially deleted in new
chr10	74825526	75028863	chr10:74825526-75028863	0	+	74842857	75028863	8553170	15	148,879,109,116,82,122,116,142,162,94,232,160,351,292,375,	0,17073,134443,144133,144493,151789,153697,156260,159553,163492,195055,195599,196354,199431,202962,
#Partially deleted in new
chr10	74825534	75028921	chr10:74825534-75028921	0	+	74842857	75028921	8553170	18	140,70,879,109,116,82,133,383,122,116,142,162,94,232,160,351,292,433,	0,13148,17065,134435,144125,144485,146972,149864,151781,153689,156252,159545,163484,195047,195591,196346,199423,202954,
#Partially deleted in new
chr10	74825557	75022137	chr10:74825557-75022137	0	+	74842857	75022137	8553170	16	117,70,879,109,116,82,133,56,122,116,142,162,94,232,160,257,	0,13125,17042,134412,144102,144462,146949,149841,151758,153666,156229,159522,163461,195024,195568,196323,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	74825567	74844982	chr10:74825567-74844982	1	+	74842857	74843544	8553170	2	107,2383,	0,17032,
#Partially deleted in new
chr10	74825584	74842880	chr10:74825584-74842880	0	+	74842857	74842880	8553170	3	182,70,281,	0,13098,17015,
#Partially deleted in new
chr10	74825613	75022116	chr10:74825613-75022116	0	+	74842857	75022116	8553170	9	61,70,879,109,116,94,232,160,236,	0,13069,16986,134356,144046,163405,194968,195512,196267,
#Partially deleted in new
chr10	74826412	75032624	chr10:74826412-75032624	1	+	74842857	75031046	789624	18	373,70,879,109,116,82,133,56,122,116,142,162,94,232,160,351,292,4136,	0,12270,16187,133557,143247,143607,146094,148986,150903,152811,155374,158667,162606,194169,194713,195468,198545,202076,
#Partially deleted in new
chr10	74826418	74843060	chr10:74826418-74843060	0	+	74842857	74843060	8553170	3	51,70,461,	0,12264,16181,
#Partially deleted in new
chr10	74826448	75032279	chr10:74826448-75032279	1	+	74842857	75031046	0	18	337,70,879,109,116,82,133,383,122,116,142,162,94,232,160,351,292,3791,	0,12234,16151,133521,143211,143571,146058,148950,150867,152775,155338,158631,162570,194133,194677,195432,198509,202040,
#Partially deleted in new
chr10	74826551	75022063	chr10:74826551-75022063	0	+	74842857	75022063	8553170	14	234,70,879,109,116,82,122,116,142,162,94,232,160,183,	0,12131,16048,133418,143108,143468,150764,152672,155235,158528,162467,194030,194574,195329,
#Partially deleted in new
chr10	74826561	75031190	chr10:74826561-75031190	1	+	74842857	75031046	0	17	224,879,109,116,82,133,56,122,116,142,162,94,232,160,351,292,2702,	0,16038,133408,143098,143458,145945,148837,150754,152662,155225,158518,162457,194020,194564,195319,198396,201927,
#Partially deleted in new
chr10	74826563	75032622	chr10:74826563-75032622	1	+	74842857	75031046	0	18	222,70,879,109,116,82,133,932,122,116,142,162,94,232,160,351,292,4134,	0,12119,16036,133406,143096,143456,145943,148835,150752,152660,155223,158516,162455,194018,194562,195317,198394,201925,
#Partially deleted in new
chr10	74826579	74962584	chr10:74826579-74962584	1	+	74842857	74960128	8553170	4	206,70,879,2615,	0,12103,16020,133390,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	74826595	74847290	chr10:74826595-74847290	1	+	74842857	74843544	8553170	2	190,4691,	0,16004,
#Partially deleted in new
chr10	74826599	75022098	chr10:74826599-75022098	0	+	74842857	75022098	8553170	15	186,70,879,109,116,82,133,56,122,116,142,94,232,160,218,	0,12083,16000,133370,143060,143420,145907,148799,150716,152624,155187,162419,193982,194526,195281,
#Partially deleted in new
chr10	74826599	75028985	chr10:74826599-75028985	0	+	74842857	75028985	8553170	18	186,101,879,109,116,82,133,932,122,116,142,162,94,232,160,351,292,497,	0,12083,16000,133370,143060,143420,145907,148799,150716,152624,155187,158480,162419,193982,194526,195281,198358,201889,
#Partially deleted in new
chr10	74826602	75024971	chr10:74826602-75024971	0	+	74842857	75024971	8553170	16	183,879,109,116,82,133,383,122,116,142,162,94,232,160,351,14,	0,15997,133367,143057,143417,145904,148796,150713,152621,155184,158477,162416,193979,194523,195278,198355,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	74826627	74989957	chr10:74826627-74989957	0	+	74826627	74826627	8553170	12	158,70,879,109,116,82,133,2039,116,142,162,939,	0,12055,15972,133342,143032,143392,145879,148771,152596,155159,158452,162391,
#Partially deleted in new
chr10	74826634	75021967	chr10:74826634-75021967	0	+	74826634	74826634	8553170	15	151,70,879,109,116,82,133,2039,116,142,162,94,232,160,87,	0,12048,15965,133335,143025,143385,145872,148764,152589,155152,158445,162384,193947,194491,195246,
#Partially deleted in new
chr10	74826880	75022133	chr10:74826880-75022133	0	+	74842857	75022133	8553170	16	63,70,879,109,116,82,133,56,122,116,142,162,94,232,160,253,	0,11802,15719,133089,142779,143139,145626,148518,150435,152343,154906,158199,162138,193701,194245,195000,
#Partially deleted in new
chr10	74827057	75032285	chr10:74827057-75032285	1	+	74842857	75031046	0	18	57,70,879,109,116,82,133,383,122,116,142,162,94,232,160,351,292,3797,	0,11625,15542,132912,142602,142962,145449,148341,150258,152166,154729,158022,161961,193524,194068,194823,197900,201431,
#Partially deleted in new
chr10	74827136	74842924	chr10:74827136-74842924	0	+	74842857	74842924	8553170	3	134,70,325,	0,11546,15463,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	74842619	74908597	chr10:74842619-74908597	0	+	74842857	74907242	8553170	3	859,382,110,	0,64545,65868,
#Partially deleted in new
chr10	74842619	75020787	chr10:74842619-75020787	0	+	74842857	74979237	8553170	6	859,109,116,142,94,206,	0,117350,136604,139167,146399,177962,
#Partially deleted in new
chr10	74842619	75022125	chr10:74842619-75022125	0	+	74842857	75020794	8553170	13	859,109,116,82,133,932,122,116,142,162,232,160,245,	0,117350,127040,127400,129887,132779,134696,136604,139167,142460,177962,178506,179261,
#Partially deleted in new
chr10	74842619	75021987	chr10:74842619-75021987	0	+	74842857	75021987	8553170	11	859,109,116,82,122,116,142,94,232,160,107,	0,117350,127040,127400,134696,136604,139167,146399,177962,178506,179261,
#Partially deleted in new
chr10	74842619	74970750	chr10:74842619-74970750	0	+	74842619	74842619	8553170	4	859,109,116,731,	0,117350,127040,127400,
#Partially deleted in new
chr10	74842863	74972534	chr10:74842863-74972534	0	+	74842863	74842863	8553170	4	615,109,116,28,	0,117106,126796,129643,
#Partially deleted in new
chr10	74842882	74970271	chr10:74842882-74970271	0	+	74842882	74842882	8553170	3	596,109,612,	0,117087,126777,
#Partially deleted in new
chr10	74975945	74989096	chr10:74975945-74989096	0	+	74975945	74981810	8553170	5	385,122,142,162,78,	0,1370,5841,9134,13073,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	74976520	75026164	chr10:74976520-75026164	0	+	74976520	74976520	8553170	8	917,116,3455,94,232,160,351,1207,	0,2703,5266,12498,44061,44605,45360,48437,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	74985328	75021954	chr10:74985328-75021954	0	+	74985328	74985328	8553170	4	3784,232,160,74,	0,35253,35797,36552,
#Partially deleted in new
chr10	75003054	75025174	chr10:75003054-75025174	3	-	75003054	75003054	8553170	2	124,65,	0,22055,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	75017474	75026127	chr10:75017474-75026127	0	+	75017474	75017474	8553170	4	3339,160,351,1170,	0,3651,4406,7483,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	75019502	75024232	chr10:75019502-75024232	0	+	75019502	75019502	8553170	2	1311,3107,	0,1623,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	75019637	75024138	chr10:75019637-75024138	0	+	75019637	75019637	8553170	3	1176,160,2258,	0,1488,2243,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	75023474	75024251	chr10:75023474-75024251	3	-	75023474	75023474	8553170	2	271,109,	0,668,
#Partially deleted in new
chr10	75037835	75058514	chr10:75037835-75058514	3	-	75037835	75058514	0	3	242,221,200,	0,5961,20479,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	75041875	75055754	chr10:75041875-75055754	3	+	75041875	75041875	8553170	4	91,156,143,1947,	0,9503,11132,11932,
#Deleted in new
chr10	75089247	75089725	chr10:75089247-75089725	7	-	75089247	75089247	16724991	1	478,	0,
#Partially deleted in new
chr10	75094431	75099506	chr10:75094431-75099506	1	-	75094675	75097884	0	4	447,221,174,78,	0,1143,3280,4997,
#Partially deleted in new
chr10	75094432	75109212	chr10:75094432-75109212	3	-	75094675	75097884	0	8	446,221,174,95,204,208,218,204,	0,1142,3279,7434,9461,11228,13559,14576,
#Partially deleted in new
chr10	75094433	75109221	chr10:75094433-75109221	1	-	75105668	75109157	0	8	445,221,174,95,204,208,218,213,	0,1141,3278,7433,9460,11227,13558,14575,
#Partially deleted in new
chr10	75094435	75109185	chr10:75094435-75109185	0	-	75101927	75109157	0	5	443,221,174,95,177,	0,1139,3276,7431,14573,
#Partially deleted in new
chr10	75094435	75097884	chr10:75094435-75097884	1	-	75094675	75097884	789624	3	443,68,173,	0,1292,3276,
#Partially deleted in new
chr10	75094435	75099527	chr10:75094435-75099527	1	-	75094675	75099437	789624	4	443,221,174,497,	0,1139,3276,4595,
#Partially deleted in new
chr10	75094435	75099515	chr10:75094435-75099515	1	-	75094675	75099095	789624	5	443,221,174,90,87,	0,1139,3276,4595,4993,
#Partially deleted in new
chr10	75094438	75109212	chr10:75094438-75109212	0	-	75103963	75109157	0	7	440,221,174,95,204,218,204,	0,1136,3273,7428,9455,13553,14570,
#Partially deleted in new
chr10	75094440	75109099	chr10:75094440-75109099	1	-	75094675	75097884	0	5	438,221,174,95,91,	0,1134,3271,7426,14568,
#Partially deleted in new
chr10	75094625	75109190	chr10:75094625-75109190	0	-	75104042	75109157	0	6	253,221,174,95,204,182,	0,949,3086,7241,9268,14383,
#Partially deleted in new
chr10	75094663	75109218	chr10:75094663-75109218	0	-	75108153	75109157	0	7	215,221,174,95,204,292,210,	0,911,3048,7203,9230,13328,14345,
#Partially deleted in new
chr10	75094675	75109191	chr10:75094675-75109191	1	-	75094675	75109157	0	4	203,221,174,183,	0,899,3036,14333,
#Partially deleted in new
chr10	75095722	75109133	chr10:75095722-75109133	0	-	75095722	75109133	789624	6	73,174,95,105,208,125,	0,1989,6144,8270,9938,13286,
#Partially deleted in new
chr10	75097742	75109191	chr10:75097742-75109191	0	-	75097742	75097742	8553170	3	143,218,183,	0,10249,11266,
#Partially deleted in new
chr10	75099585	75168627	chr10:75099585-75168627	0	+	75150528	75168627	789624	4	143,593,96,87,	0,50928,65059,68955,
#Partially deleted in new
chr10	75101943	75109206	chr10:75101943-75109206	0	-	75101943	75109157	789624	4	18,204,208,198,	0,1950,3717,7065,
#Partially deleted in new
chr10	75111470	75176831	chr10:75111470-75176831	1	+	75111548	75176692	789624	6	252,593,96,118,151,444,	0,39043,53174,57070,64595,64917,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	75111634	75182123	chr10:75111634-75182123	3	+	75150528	75176692	789624	6	88,593,96,118,151,5736,	0,38879,53010,56906,64431,64753,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	75111691	75179923	chr10:75111691-75179923	0	+	75111691	75176129	8553170	7	31,593,96,118,32,151,3536,	0,38822,52953,56849,62040,64374,64696,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	75111708	75182123	chr10:75111708-75182123	1	+	75150528	75176254	789624	5	70,593,96,118,6058,	0,38805,52936,56832,64357,
#Partially deleted in new
chr10	75125216	75125862	chr10:75125216-75125862	7	+	75125216	75125216	16724991	2	105,221,	0,425,
#Partially deleted in new
chr10	75210153	75230951	chr10:75210153-75230951	0	+	75211158	75230951	789624	10	59,56,69,50,153,53,228,151,58,54,	0,980,2076,3867,8909,9150,10589,12098,19490,20744,
#Partially deleted in new
chr10	75210153	75231444	chr10:75210153-75231444	3	+	75211158	75230989	789624	10	59,56,69,50,153,53,228,151,58,547,	0,980,2076,3867,8909,9150,10589,12098,19490,20744,
#Partially deleted in new
chr10	75210644	75220970	chr10:75210644-75220970	0	+	75211158	75220970	789624	7	72,56,69,50,153,53,228,	0,489,1585,3376,8418,8659,10098,
#Partially deleted in new
chr10	75210750	75231448	chr10:75210750-75231448	1	+	75211158	75230989	789624	10	188,56,69,50,153,53,228,151,58,551,	0,383,1479,3270,8312,8553,9992,11501,18893,20147,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	75210774	75222278	chr10:75210774-75222278	0	+	75210774	75210774	8553170	9	164,56,69,50,59,153,53,228,27,	0,359,1455,3246,7158,8288,8529,9968,11477,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	75210803	75218238	chr10:75210803-75218238	0	+	75210803	75210803	8553170	5	135,56,69,50,351,	0,330,1426,3217,7084,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	75210812	75220862	chr10:75210812-75220862	0	+	75210812	75210812	8553170	7	126,56,69,50,104,294,120,	0,321,1417,3208,7075,8250,9930,
#Partially deleted in new
chr10	75210813	75220970	chr10:75210813-75220970	0	+	75210813	75210813	8553170	6	125,56,69,50,294,228,	0,320,1416,3207,8249,9929,
#Partially deleted in new
chr10	75210847	75231277	chr10:75210847-75231277	1	+	75211583	75230989	789624	11	91,56,178,69,50,153,53,228,151,58,380,	0,286,634,1382,3173,8215,8456,9895,11404,18796,20050,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	75210855	75222259	chr10:75210855-75222259	0	+	75210855	75210855	8553170	9	83,56,69,50,104,153,53,228,8,	0,278,1374,3165,7032,8207,8448,9887,11396,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	75210863	75221032	chr10:75210863-75221032	0	+	75210863	75210863	8553170	8	75,56,69,50,104,153,53,290,	0,270,1366,3157,7024,8199,8440,9879,
#Partially deleted in new
chr10	75211033	75222280	chr10:75211033-75222280	0	+	75211158	75222280	789624	7	156,69,50,153,53,228,29,	0,1196,2987,8029,8270,9709,11218,
#Partially deleted in new
chr10	75211455	75219196	chr10:75211455-75219196	0	+	75211583	75219196	789624	4	204,69,50,134,	0,774,2565,7607,
#Deleted in new
chr10	75229309	75231275	chr10:75229309-75231275	0	+	75229309	75229309	8553170	2	392,378,	0,1588,
#Deleted in new
chr10	75233968	75236011	chr10:75233968-75236011	3	-	75234072	75235928	0	7	257,134,55,119,106,128,177,	0,641,969,1091,1298,1647,1866,
#Deleted in new
chr10	75233970	75235730	chr10:75233970-75235730	0	-	75233970	75233970	8553170	4	255,134,241,464,	0,639,967,1296,
#Deleted in new
chr10	75233977	75235936	chr10:75233977-75235936	0	-	75233977	75233977	8553170	4	248,134,55,102,	0,632,960,1857,
#Deleted in new
chr10	75233983	75235925	chr10:75233983-75235925	0	-	75234072	75235925	789624	7	242,134,55,119,106,124,91,	0,626,954,1076,1283,1636,1851,
#Deleted in new
chr10	75233983	75235512	chr10:75233983-75235512	0	-	75233983	75233983	8553170	5	242,134,55,119,246,	0,626,954,1076,1283,
#Deleted in new
chr10	75234425	75235336	chr10:75234425-75235336	0	-	75234425	75234425	8553170	4	318,55,119,70,	0,512,634,841,
#Deleted in new
chr10	75235314	75236030	chr10:75235314-75236030	0	-	75235314	75235314	8553170	2	58,415,	0,301,
#Deleted in new
chr10	75269391	75269545	chr10:75269391-75269545	7	-	75269391	75269391	16724991	1	154,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	75269818	75358707	chr10:75269818-75358707	3	+	75269818	75269818	8553170	6	173,112,117,119,71,198,	0,68493,73405,80533,88457,88691,
#Partially deleted in new
chr10	75273296	75358608	chr10:75273296-75358608	1	+	75273296	75273296	8553170	4	115,198,137,99,	0,22219,23218,85213,
#Deleted in new
chr10	75276375	75276646	chr10:75276375-75276646	7	-	75276375	75276375	16724991	1	271,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	75279725	75401246	chr10:75279725-75401246	3	-	75279725	75279725	789624	4	186,63,111,142,	0,332,3547,121379,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	75279730	75283346	chr10:75279730-75283346	0	-	75279730	75279730	8553170	4	181,63,62,74,	0,327,539,3542,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	75283800	75373500	chr10:75283800-75373500	0	+	75283800	75283800	8553170	3	257,198,120,	0,74709,89580,
#Deleted in new
chr10	75288332	75288682	chr10:75288332-75288682	7	-	75288332	75288332	16724991	1	350,	0,
#Partially deleted in new
chr10	75296382	75360899	chr10:75296382-75360899	0	+	75296382	75296382	8553170	3	269,198,279,	0,62127,64238,
#Partially deleted in new
chr10	75296389	75361678	chr10:75296389-75361678	0	+	75296389	75296389	789624	3	262,540,1058,	0,62120,64231,
#Partially deleted in new
chr10	75296428	75360689	chr10:75296428-75360689	0	+	75296428	75296428	8553170	4	223,198,111,69,	0,62081,62510,64192,
#Partially deleted in new
chr10	75342250	75361680	chr10:75342250-75361680	1	+	75342250	75342250	8553170	6	31,121,117,198,111,1060,	0,125,973,16259,16688,18370,
#Deleted in new
chr10	75382392	75382844	chr10:75382392-75382844	7	-	75382392	75382392	16724991	1	452,	0,
#Deleted in new
chr10	75397829	75401906	chr10:75397829-75401906	3	-	75398748	75401419	789624	2	2545,802,	0,3275,
#Deleted in new
chr10	75401518	75407941	chr10:75401518-75407941	3	+	75401518	75401518	789624	2	743,687,	0,5736,
#Deleted in new
chr10	75402896	75407695	chr10:75402896-75407695	0	+	75402896	75402896	8553170	2	187,441,	0,4358,
#Deleted in new
chr10	75403053	75408982	chr10:75403053-75408982	1	+	75403053	75403053	789624	2	298,1728,	0,4201,
#Deleted in new
chr10	75403755	75407958	chr10:75403755-75407958	0	+	75403755	75403755	789624	2	302,704,	0,3499,
#Deleted in new
chr10	75403875	75408308	chr10:75403875-75408308	0	+	75403875	75403875	789624	2	71,1054,	0,3379,
#Deleted in new
chr10	75404164	75407694	chr10:75404164-75407694	0	+	75404164	75404164	8553170	2	120,440,	0,3090,
#Deleted in new
chr10	75408972	75409326	chr10:75408972-75409326	3	-	75408972	75408972	8553170	1	354,	0,
#Deleted in new
chr10	75409156	75411842	chr10:75409156-75411842	3	+	75409156	75409156	789624	3	284,55,1551,	0,973,1135,
#Deleted in new
chr10	75430570	75431588	chr10:75430570-75431588	3	-	75430570	75430570	8553170	2	193,67,	0,951,
#Partially deleted in new
chr10	75431452	76557375	chr10:75431452-76557375	1	+	75431724	76557288	789624	7	302,101,127,140,118,85,167,	0,6941,604555,615711,627213,892948,1125756,
#Deleted in new
chr10	75450080	75451725	chr10:75450080-75451725	3	+	75450080	75450080	8553170	1	1645,	0,
#Deleted in new
chr10	75552457	75552553	chr10:75552457-75552553	3	+	75552457	75552457	5263520	1	96,	0,
#Partially deleted in new
chr10	75601239	76036136	chr10:75601239-76036136	0	+	75601239	75601239	8553170	2	92,129,	0,434768,
#Deleted in new
chr10	75642475	75643106	chr10:75642475-75643106	3	+	75642475	75642475	8553170	1	631,	0,
#Partially deleted in new
chr10	75647508	76557377	chr10:75647508-76557377	0	+	75647508	75647508	789624	8	85,128,272,127,140,118,85,169,	0,235147,235745,388499,399655,411157,676892,909700,
#Deleted in new
chr10	75742739	75743755	chr10:75742739-75743755	3	+	75742739	75742739	8553170	2	144,290,	0,726,
#Partially deleted in new
chr10	75782760	76557375	chr10:75782760-76557375	3	+	75782975	76557288	789624	6	262,127,140,118,85,167,	0,253247,264403,275905,541640,774448,
#Partially deleted in new
chr10	76036005	76058789	chr10:76036005-76058789	1	+	76036005	76058789	789624	3	129,140,124,	0,11158,22660,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	76242021	76242301	chr10:76242021-76242301	3	-	76242021	76242021	8553170	1	280,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	76260799	76260903	chr10:76260799-76260903	3	-	76260799	76260799	8553170	1	104,	0,
#Deleted in new
chr10	76270205	76270800	chr10:76270205-76270800	3	+	76270205	76270205	8553170	1	595,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	76318333	76560167	chr10:76318333-76560167	1	+	76319209	76557288	789624	3	879,85,2959,	0,6067,238875,
#Partially deleted in new
chr10	76324400	76557306	chr10:76324400-76557306	0	+	76324400	76324400	8553170	3	85,124,98,	0,22029,232808,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	76324400	76557366	chr10:76324400-76557366	0	+	76324400	76324400	8553170	3	85,190,158,	0,211397,232808,
#Partially deleted in new
chr10	76396500	76557326	chr10:76396500-76557326	0	+	76396500	76396500	8553170	2	90,118,	0,160708,
#Partially deleted in new
chr10	76402228	76557529	chr10:76402228-76557529	0	+	76402228	76402228	8553170	3	96,146,321,	0,992,154980,
#Partially deleted in new
chr10	76402228	76557577	chr10:76402228-76557577	0	+	76402228	76402228	8553170	3	96,141,369,	0,997,154980,
#Partially deleted in new
chr10	76403220	76557356	chr10:76403220-76557356	0	+	76403220	76403220	8553170	2	146,148,	0,153988,
#Partially deleted in new
chr10	76403220	76557352	chr10:76403220-76557352	0	+	76403220	76403220	8553170	3	146,47,144,	0,30495,153988,
#Deleted in new
chr10	76437407	76438775	chr10:76437407-76438775	3	-	76437407	76437407	8553170	2	143,238,	0,1130,
#Partially deleted in new
chr10	76464813	76557340	chr10:76464813-76557340	0	+	76464813	76464813	8553170	2	114,132,	0,92395,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	76470397	76557353	chr10:76470397-76557353	0	+	76470397	76470397	8553170	3	85,123,145,	0,65400,86811,
#Deleted in new
chr10	76558349	76560994	chr10:76558349-76560994	3	-	76558349	76558349	8553170	2	293,299,	0,2346,
#Deleted in new
chr10	76835376	76835502	chr10:76835376-76835502	3	-	76835376	76835376	8553170	1	126,	0,
#Deleted in new
chr10	76836567	76836861	chr10:76836567-76836861	7	+	76836567	76836567	16724991	1	294,	0,
#Partially deleted in new
chr10	76869600	77403984	chr10:76869600-77403984	0	-	76877868	77403984	789624	28	8293,225,119,195,131,114,193,225,124,94,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,123,	0,17690,19850,21924,40365,45335,75172,79541,84200,100373,142366,149412,155845,158222,169927,203496,209880,215036,216887,220799,238880,240572,242766,251372,313820,315222,381594,534261,
#Partially deleted in new
chr10	76869601	77637819	chr10:76869601-77637819	1	-	76877868	77637642	789624	29	8292,225,119,195,131,114,193,225,124,94,9,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,555,	0,17689,19849,21923,40364,45334,75171,79540,84199,100372,138583,142365,149411,158221,169926,203495,209879,215035,216886,220798,238879,240571,242765,251371,313819,315221,381593,534260,767663,
#Partially deleted in new
chr10	76869601	77637758	chr10:76869601-77637758	1	-	76877868	77637642	789624	28	8292,225,119,195,131,114,193,225,124,94,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,494,	0,17689,19849,21923,40364,45334,75171,79540,84199,100372,142365,149411,158221,169926,203495,209879,215035,216886,220798,238879,240571,242765,251371,313819,315221,381593,534260,767663,
#Partially deleted in new
chr10	76869601	77637819	chr10:76869601-77637819	1	-	76877868	77637642	789624	30	8292,225,119,195,131,81,114,193,225,124,94,9,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,555,	0,17689,19849,21923,40364,44455,45334,75171,79540,84199,100372,138583,142365,149411,158221,169926,203495,209879,215035,216886,220798,238879,240571,242765,251371,313819,315221,381593,534260,767663,
#Partially deleted in new
chr10	76872903	77637447	chr10:76872903-77637447	0	-	76877868	77637447	789624	30	4987,225,119,195,131,81,114,193,225,124,94,9,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,183,	0,14387,16547,18621,37062,41153,42032,71869,76238,80897,97070,135281,139063,146109,154919,166624,200193,206577,211733,213584,217496,235577,237269,239463,248069,310517,311919,378291,530958,764361,
#Partially deleted in new
chr10	76872903	77637993	chr10:76872903-77637993	3	-	76877868	77637642	789624	28	4987,225,119,195,131,114,193,225,124,94,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,729,	0,14387,16547,18621,37062,42032,71869,76238,80897,97070,139063,146109,154919,166624,200193,206577,211733,213584,217496,235577,237269,239463,248069,310517,311919,378291,530958,764361,
#Partially deleted in new
chr10	76876618	77637447	chr10:76876618-77637447	0	-	76877738	77637447	789624	31	1275,29,225,119,195,131,81,114,193,225,124,94,9,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,183,	0,8370,10672,12832,14906,33347,37438,38317,68154,72523,77182,93355,131566,135348,142394,151204,162909,196478,202862,208018,209869,213781,231862,233554,235748,244354,306802,308204,374576,527243,760646,
#Partially deleted in new
chr10	76876645	77638115	chr10:76876645-77638115	1	-	76877868	77637642	789624	31	1245,225,119,195,131,114,193,225,124,94,174,9,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,851,	0,10645,12805,14879,33320,38290,68127,72496,77155,93328,124761,131539,135321,142367,148800,151177,162882,196451,202835,207991,209842,213754,231835,233527,235721,244327,306775,308177,374549,527216,760619,
#Partially deleted in new
chr10	76877166	77638369	chr10:76877166-77638369	1	-	76877868	77637642	789624	30	727,225,119,195,131,81,114,193,225,124,94,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,1105,	0,10124,12284,14358,32799,36890,37769,67606,71975,76634,92807,134800,141846,148279,150656,162361,195930,202314,207470,209321,213233,231314,233006,235200,243806,306254,307656,374028,526695,760098,
#Partially deleted in new
chr10	76877167	77637642	chr10:76877167-77637642	1	-	76877868	77637642	789624	31	726,225,119,195,131,81,114,193,225,124,94,9,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,378,	0,10123,12283,14357,32798,36889,37768,67605,71974,76633,92806,131017,134799,141845,148278,150655,162360,195929,202313,207469,209320,213232,231313,233005,235199,243805,306253,307655,374027,526694,760097,
#Partially deleted in new
chr10	76877222	77637494	chr10:76877222-77637494	0	-	76877738	77637494	789624	30	671,29,225,119,195,131,114,193,225,124,94,9,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,230,	0,7766,10068,12228,14302,32743,37713,67550,71919,76578,92751,130962,134744,141790,150600,162305,195874,202258,207414,209265,213177,231258,232950,235144,243750,306198,307600,373972,526639,760042,
#Partially deleted in new
chr10	76877245	77637722	chr10:76877245-77637722	1	-	76877868	77637642	789624	30	645,225,119,195,131,114,193,225,124,94,174,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,458,	0,10045,12205,14279,32720,37690,67527,71896,76555,92728,124161,134721,141767,148200,150577,162282,195851,202235,207391,209242,213154,231235,232927,235121,243727,306175,307577,373949,526616,760019,
#Partially deleted in new
chr10	76877245	77637775	chr10:76877245-77637775	1	-	76877738	77637642	789624	29	645,29,225,119,195,131,114,193,225,124,94,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,511,	0,7743,10045,12205,14279,32720,37690,67527,71896,76555,92728,134721,141767,150577,162282,195851,202235,207391,209242,213154,231235,232927,235121,243727,306175,307577,373949,526616,760019,
#Partially deleted in new
chr10	76877245	77637775	chr10:76877245-77637775	1	-	76877868	77637642	789624	29	645,225,119,195,131,114,193,225,124,94,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,511,	0,10045,12205,14279,32720,37690,67527,71896,76555,92728,134721,141767,148200,150577,162282,195851,202235,207391,209242,213154,231235,232927,235121,243727,306175,307577,373949,526616,760019,
#Partially deleted in new
chr10	76877249	77309643	chr10:76877249-77309643	0	-	76877249	76877249	8553170	30	641,29,225,119,195,131,81,114,193,225,124,94,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,164,	0,7739,10041,12201,14275,32716,36807,37686,67523,71892,76551,92724,134717,141763,148196,150573,162278,195847,202231,207387,209238,213150,231231,232923,235117,243723,306171,307573,373945,432230,
#Partially deleted in new
chr10	76877419	77021106	chr10:76877419-77021106	0	-	76877419	76877419	8553170	13	474,29,225,119,195,131,81,114,193,225,124,94,2094,	0,7569,9871,12031,14105,32546,36637,37516,67353,71722,76381,92554,141593,
#Partially deleted in new
chr10	76877521	77637447	chr10:76877521-77637447	0	-	76877738	77637447	789624	31	369,29,225,119,195,131,81,114,193,225,124,94,9,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,183,	0,7467,9769,11929,14003,32444,36535,37414,67251,71620,76279,92452,130663,134445,141491,150301,162006,195575,201959,207115,208966,212878,230959,232651,234845,243451,305899,307301,373673,526340,759743,
#Partially deleted in new
chr10	76877597	77637947	chr10:76877597-77637947	0	-	77090429	77637642	789624	27	296,225,119,195,131,114,193,225,124,94,77,87,69,110,156,70,83,106,111,171,76,76,112,94,62,162,683,	0,9693,11853,13927,32368,37338,67175,71544,76203,92376,134369,141415,150225,161930,195499,201883,207039,208890,212802,232575,234769,243375,305823,307225,373597,526264,759667,
#Partially deleted in new
chr10	76877597	77637462	chr10:76877597-77637462	0	-	76970063	77637462	789624	26	296,225,119,195,131,114,193,225,124,94,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,198,	0,9693,11853,13927,32368,37338,67175,71544,76203,92376,150225,161930,195499,201883,207039,208890,212802,230883,232575,234769,243375,305823,307225,373597,526264,759667,
#Partially deleted in new
chr10	76877599	77183479	chr10:76877599-77183479	0	-	77090429	77183479	789624	25	291,225,119,195,131,114,193,225,124,94,87,96,77,87,69,110,156,70,83,106,111,171,76,76,59,	0,9691,11851,13925,32366,37336,67173,71542,76201,92374,96887,99943,134367,141413,150223,161928,195497,201881,207037,208888,212800,232573,234767,243373,305821,
#Deleted in new
chr10	76877600	76887910	chr10:76877600-76887910	0	-	76877600	76877600	8553170	3	290,225,116,	0,9690,10194,
#Partially deleted in new
chr10	76877610	77637563	chr10:76877610-77637563	0	-	76877868	77637563	789624	30	280,225,119,195,131,81,114,193,225,124,94,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,299,	0,9680,11840,13914,32355,36446,37325,67162,71531,76190,92363,134356,141402,147835,150212,161917,195486,201870,207026,208877,212789,230870,232562,234756,243362,305810,307212,373584,526251,759654,
#Partially deleted in new
chr10	76877619	77309621	chr10:76877619-77309621	0	-	76877619	76877619	8553170	30	271,225,119,195,131,81,114,193,225,124,94,9,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,142,	0,9671,11831,13905,32346,36437,37316,67153,71522,76181,92354,130565,134347,141393,147826,150203,161908,195477,201861,207017,208868,212780,230861,232553,234747,243353,305801,307203,373575,431860,
#Partially deleted in new
chr10	76877686	77637453	chr10:76877686-77637453	0	-	76877738	77637453	789624	32	204,29,225,119,195,131,114,193,225,124,94,174,9,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,189,	0,7302,9604,11764,13838,32279,37249,67086,71455,76114,92287,123720,130498,134280,141326,147759,150136,161841,195410,201794,206950,208801,212713,230794,232486,234680,243286,305734,307136,373508,526175,759578,
#Partially deleted in new
chr10	76877724	77637775	chr10:76877724-77637775	1	-	76877738	77637642	789624	30	166,29,225,119,195,131,114,193,225,124,94,9,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,511,	0,7264,9566,11726,13800,32241,37211,67048,71417,76076,92249,130460,134242,141288,150098,161803,195372,201756,206912,208763,212675,230756,232448,234642,243248,305696,307098,373470,526137,759540,
#Partially deleted in new
chr10	76877724	77637775	chr10:76877724-77637775	1	-	76877738	77637642	789624	30	166,29,225,119,195,131,114,193,225,124,94,174,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,511,	0,7264,9566,11726,13800,32241,37211,67048,71417,76076,92249,123682,134242,141288,150098,161803,195372,201756,206912,208763,212675,230756,232448,234642,243248,305696,307098,373470,526137,759540,
#Partially deleted in new
chr10	76877724	77637766	chr10:76877724-77637766	1	-	76877868	77637642	789624	29	166,225,119,195,131,114,193,225,124,94,174,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,502,	0,9566,11726,13800,32241,37211,67048,71417,76076,92249,123682,134242,141288,150098,161803,195372,201756,206912,208763,212675,230756,232448,234642,243248,305696,307098,373470,526137,759540,
#Partially deleted in new
chr10	76877724	77637775	chr10:76877724-77637775	1	-	76877738	77637642	789624	29	166,29,225,119,195,131,114,193,225,124,94,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,511,	0,7264,9566,11726,13800,32241,37211,67048,71417,76076,92249,134242,141288,150098,161803,195372,201756,206912,208763,212675,230561,232448,234642,243248,305696,307098,373470,526137,759540,
#Partially deleted in new
chr10	76877724	77637775	chr10:76877724-77637775	1	-	76877868	77637642	789624	28	166,225,119,195,131,114,193,225,124,94,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,511,	0,9566,11726,13800,32241,37211,67048,71417,76076,92249,134242,141288,150098,161803,195372,201756,206912,208763,212675,230561,232448,234642,243248,305696,307098,373470,526137,759540,
#Partially deleted in new
chr10	76877724	77637775	chr10:76877724-77637775	1	-	76877738	77637642	789624	30	166,29,225,119,195,131,114,193,225,124,94,9,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,511,	0,7264,9566,11726,13800,32241,37211,67048,71417,76076,92249,130460,134242,141288,150098,161803,195372,201756,206912,208763,212675,230561,232448,234642,243248,305696,307098,373470,526137,759540,
#Partially deleted in new
chr10	76877724	77637775	chr10:76877724-77637775	1	-	76877738	77637642	789624	30	166,29,225,119,195,131,114,193,225,124,94,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,511,	0,7264,9566,11726,13800,32241,37211,67048,71417,76076,92249,134242,141288,147721,150098,161803,195372,201756,206912,208763,212675,230561,232448,234642,243248,305696,307098,373470,526137,759540,
#Partially deleted in new
chr10	76877724	77637598	chr10:76877724-77637598	0	-	76877738	77637598	789624	31	166,29,225,119,195,131,114,193,225,124,94,9,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,334,	0,7264,9566,11726,13800,32241,37211,67048,71417,76076,92249,130460,134242,141288,147721,150098,161803,195372,201756,206912,208763,212675,230561,232448,234642,243248,305696,307098,373470,526137,759540,
#Partially deleted in new
chr10	76877724	77637775	chr10:76877724-77637775	1	-	76877738	77637642	789624	31	169,29,87,119,195,131,114,193,225,124,94,174,9,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,511,	0,7264,9566,11726,13800,32241,37211,67048,71417,76076,92249,123682,130460,134242,141288,150098,161803,195372,201756,206912,208763,212675,230756,232448,234642,243248,305696,307098,373470,526137,759540,
#Partially deleted in new
chr10	76877724	77637775	chr10:76877724-77637775	1	-	76877738	77637642	789624	30	166,29,225,119,195,131,114,193,225,124,94,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,511,	0,7264,9566,11726,13800,32241,37211,67048,71417,76076,92249,134242,141288,147721,150098,161803,195372,201756,206912,208763,212675,230756,232448,234642,243248,305696,307098,373470,526137,759540,
#Partially deleted in new
chr10	76877724	77637775	chr10:76877724-77637775	1	-	76877738	77637642	789624	31	169,29,225,119,195,131,114,193,225,124,94,9,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,511,	0,7264,9566,11726,13800,32241,37211,67048,71417,76076,92249,130460,134242,141288,147721,150098,161803,195372,201756,206912,208763,212675,230756,232448,234642,243248,305696,307098,373470,526137,759540,
#Partially deleted in new
chr10	76877725	77637775	chr10:76877725-77637775	0	-	77108331	77637642	789624	33	165,29,225,119,195,131,114,193,225,124,94,174,9,77,87,12,69,110,156,70,83,106,111,92,92,171,76,76,112,94,62,162,511,	0,7263,9565,11725,13799,32240,37210,67047,71416,76075,92248,123681,130459,134241,141287,147720,150097,161802,195371,201755,206911,208762,212674,230560,230755,232447,234641,243247,305695,307097,373469,526136,759539,
#Partially deleted in new
chr10	76877738	77637447	chr10:76877738-77637447	0	-	76877738	77637447	789624	30	152,29,225,119,195,131,81,114,193,225,124,94,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,183,	0,7250,9552,11712,13786,32227,36318,37197,67034,71403,76062,92235,134228,141274,150084,161789,195358,201742,206898,208749,212661,230742,232434,234628,243234,305682,307084,373456,526123,759526,
#Partially deleted in new
chr10	76877738	77637447	chr10:76877738-77637447	0	-	76877738	77637447	789624	29	155,29,225,119,195,131,114,193,225,124,94,9,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,183,	0,7250,9552,11712,13786,32227,37197,67034,71403,76062,92235,130446,134228,141274,150084,161789,195358,201742,206898,208749,212661,230742,232434,234628,243234,305682,307084,373456,759526,
#Partially deleted in new
chr10	76877760	77350761	chr10:76877760-77350761	0	-	76877760	76877760	8553170	30	130,225,119,195,131,114,193,225,124,94,87,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,76,62,168,433,	0,9530,11690,13764,32205,37175,67012,71381,76040,92213,96726,134206,141252,150062,161767,195336,201720,206876,208727,212639,230720,232412,234606,243212,305660,307062,339722,373434,426626,472568,
#Deleted in new
chr10	76877822	76887937	chr10:76877822-76887937	0	-	76877822	76877822	8553170	3	71,225,143,	0,9468,9972,
#Partially deleted in new
chr10	76877868	77637447	chr10:76877868-77637447	0	-	76877868	77637447	789624	29	25,225,119,195,131,114,193,225,124,94,87,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,183,	0,9422,11582,13656,32097,37067,66904,71273,75932,92105,96618,134098,141144,149954,161659,195228,201612,206768,208619,212531,230612,232304,234498,243104,305552,306954,373326,525993,759396,
#Partially deleted in new
chr10	76877868	77637447	chr10:76877868-77637447	0	-	76877868	77637447	789624	28	25,225,119,195,131,114,193,225,124,94,174,77,87,69,110,70,83,106,111,92,171,76,76,112,94,62,162,183,	0,9422,11582,13656,32097,37067,66904,71273,75932,92105,123538,134098,141144,149954,161659,201612,206768,208619,212531,230612,232304,234498,243104,305552,306954,373326,525993,759396,
#Partially deleted in new
chr10	76877868	77637642	chr10:76877868-77637642	1	-	76877868	77637642	789624	29	25,225,119,195,131,114,193,225,124,94,174,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,378,	0,9422,11582,13656,32097,37067,66904,71273,75932,92105,123538,134098,141144,149954,161659,195228,201612,206768,208619,212531,230612,232304,234498,243104,305552,306954,373326,525993,759396,
#Partially deleted in new
chr10	76877868	77637447	chr10:76877868-77637447	0	-	76877868	77637447	789624	31	25,225,119,195,131,114,193,225,124,94,174,9,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,183,	0,9422,11582,13656,32097,37067,66904,71273,75932,92105,123538,130316,134098,141144,147577,149954,161659,195228,201612,206768,208619,212531,230612,232304,234498,243104,305552,306954,373326,525993,759396,
#Partially deleted in new
chr10	76877868	77637447	chr10:76877868-77637447	0	-	77108331	77637447	789624	29	25,225,119,195,131,114,193,225,124,94,77,87,69,110,156,70,83,106,111,92,92,171,76,76,112,94,62,162,183,	0,9422,11582,13656,32097,37067,66904,71273,75932,92105,134098,141144,149954,161659,195228,201612,206768,208619,212531,230417,230612,232304,234498,243104,305552,306954,373326,525993,759396,
#Partially deleted in new
chr10	76877868	77637642	chr10:76877868-77637642	1	-	76877868	77637642	789624	28	25,225,119,195,131,114,193,225,124,94,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,378,	0,9422,11582,13656,32097,37067,66904,71273,75932,92105,134098,141144,147577,149954,161659,195228,201612,206768,208619,212531,230612,232304,234498,243104,305552,306954,373326,759396,
#Partially deleted in new
chr10	76877868	77637447	chr10:76877868-77637447	0	-	76877868	77637447	789624	30	25,225,119,195,131,114,193,225,124,94,174,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,183,	0,9422,11582,13656,32097,37067,66904,71273,75932,92105,123538,134098,141144,147577,149954,161659,195228,201612,206768,208619,212531,230612,232304,234498,243104,305552,306954,373326,525993,759396,
#Partially deleted in new
chr10	76884115	77637642	chr10:76884115-77637642	1	-	76887265	77637642	0	29	426,255,119,195,131,114,193,225,124,94,87,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,378,	0,3145,5335,7409,25850,30820,60657,65026,69685,85858,90371,127851,134897,143707,155412,188981,195365,200521,202372,206284,224365,226057,228251,236857,299305,300707,367079,519746,753149,
#Partially deleted in new
chr10	76884868	77637902	chr10:76884868-77637902	1	-	76887265	77637642	0	27	2647,119,195,131,114,193,225,124,94,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,638,	0,4582,6656,25097,30067,59904,64273,68932,85105,127098,134144,142954,154659,188228,194612,199768,201619,205531,223612,225304,227498,236104,298552,299954,366326,518993,752396,
#Partially deleted in new
chr10	76884876	77637775	chr10:76884876-77637775	1	-	76887265	77637642	0	28	2639,119,195,131,114,193,225,124,94,174,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,511,	0,4574,6648,25089,30059,59896,64265,68924,85097,116530,127090,134136,142946,154651,188220,194604,199760,201611,205523,223604,225296,227490,236096,298544,299946,366318,518985,752388,
#Partially deleted in new
chr10	76884877	77404025	chr10:76884877-77404025	1	-	76887265	77403897	789624	28	2638,119,195,131,114,193,225,124,94,87,96,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,164,	0,4573,6647,25088,30058,59895,64264,68923,85096,89609,92665,127089,134135,142945,154650,188219,194603,199759,201610,205522,223603,225295,227489,236095,298543,299945,366317,518984,
#Partially deleted in new
chr10	76884877	77404025	chr10:76884877-77404025	1	-	76887265	77403897	789624	28	2638,119,195,131,81,114,193,225,124,94,9,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,164,	0,4573,6647,25088,29179,30058,59895,64264,68923,85096,123307,127089,134135,142945,154650,188219,194603,199759,201610,205522,223603,225295,227489,236095,298543,299945,366317,518984,
#Partially deleted in new
chr10	76884923	77404023	chr10:76884923-77404023	0	-	76884962	77404023	789624	30	94,225,119,195,131,81,114,193,225,124,94,87,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,	0,2367,4527,6601,25042,29133,30012,59849,64218,68877,85050,89563,127043,134089,140522,142899,154604,188173,194557,199713,201564,205476,223557,225249,227443,236049,298497,299899,366271,518938,
#Partially deleted in new
chr10	76884933	77637568	chr10:76884933-77637568	0	-	76884962	77637568	789624	31	84,225,119,195,131,81,114,193,225,124,94,9,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,304,	0,2357,4517,6591,25032,29123,30002,59839,64208,68867,85040,123251,127033,134079,140512,142889,154594,188163,194547,199703,201554,205466,223547,225239,227433,236039,298487,299889,366261,518928,752331,
#Partially deleted in new
chr10	76884933	77184875	chr10:76884933-77184875	0	-	76884962	77184875	789624	26	84,225,119,195,131,114,193,225,124,94,9,77,87,69,110,156,70,83,106,111,92,171,76,76,112,53,	0,2357,4517,6591,25032,30002,59839,64208,68867,85040,123251,127033,134079,142889,154594,188163,194547,199703,201554,205466,223547,225239,227433,236039,298487,299889,
#Partially deleted in new
chr10	76885203	77039538	chr10:76885203-77039538	0	-	76887265	77039538	789624	14	2312,119,195,131,114,193,225,124,94,77,39,87,69,11,	0,4247,6321,24762,29732,59569,63938,68597,84770,126763,127315,133809,142619,154324,
#Partially deleted in new
chr10	76885239	77637775	chr10:76885239-77637775	1	-	76887265	77637642	789624	28	2276,119,195,131,114,193,225,124,94,9,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,511,	0,4211,6285,24726,29696,59533,63902,68561,84734,122945,126727,133773,142583,154288,187857,194241,199397,201248,205160,223241,224933,227127,235733,298181,299583,365955,518622,752025,
#Partially deleted in new
chr10	76885259	77404023	chr10:76885259-77404023	0	-	76887265	77404023	789624	26	2256,119,195,131,81,114,193,225,124,94,77,87,12,69,110,156,70,111,92,171,76,76,112,94,62,162,	0,4191,6265,24706,28797,29676,59513,63882,68541,84714,126707,133753,140186,142563,154268,187837,194221,205140,223221,224913,227107,235713,298161,299563,365935,518602,
#Partially deleted in new
chr10	76885261	77403913	chr10:76885261-77403913	0	-	76885261	76885261	8553170	26	2254,119,195,5084,193,225,124,94,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,52,	0,4189,6263,24704,59511,63880,68539,84712,126705,133751,140184,142561,154266,187835,194219,199375,201226,205138,223219,224911,227105,235711,298159,299561,365933,518600,
#Partially deleted in new
chr10	76885264	77637806	chr10:76885264-77637806	1	-	76887265	77637642	0	28	2251,119,195,131,114,193,225,124,94,87,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,542,	0,4186,6260,24701,29671,59508,63877,68536,84709,89222,126702,133748,142558,154263,187832,194216,199372,201223,205135,223216,224908,227102,235708,298156,299558,365930,518597,752000,
#Partially deleted in new
chr10	76885288	77404023	chr10:76885288-77404023	0	-	77120978	77404023	789624	25	2227,119,195,131,114,193,225,124,94,9,77,87,69,110,156,70,83,106,111,92,171,76,76,62,162,	0,4162,6236,24677,29647,59484,63853,68512,84685,122896,126678,133724,142534,154239,187808,194192,199348,201199,205111,223192,224884,227078,235684,365906,518573,
#Partially deleted in new
chr10	76885405	77637722	chr10:76885405-77637722	1	-	76887265	77637642	789624	29	2110,119,195,131,81,114,193,225,124,94,9,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,458,	0,4045,6119,24560,28651,29530,59367,63736,68395,84568,122779,126561,133607,142417,154122,187691,194075,199231,201082,204994,223075,224767,226961,235567,298015,299417,365789,518456,751859,
#Partially deleted in new
chr10	76887068	77637447	chr10:76887068-77637447	0	-	76887265	77637447	789624	29	447,119,195,131,114,193,225,124,94,87,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,183,	0,2382,4456,22897,27867,57704,62073,66732,82905,87418,124898,131944,138377,140754,152459,186028,192412,197568,199419,203331,221412,223104,225298,233904,296352,297754,364126,516793,750196,
#Partially deleted in new
chr10	76887234	77637738	chr10:76887234-77637738	1	-	76887265	77637642	789624	27	281,119,195,131,114,193,225,124,94,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,474,	0,2216,4290,22731,27701,57538,61907,66566,82739,124732,131778,140588,152293,185862,192246,197402,199253,203165,221051,222938,225132,233738,296186,297588,363960,516627,750030,
#Partially deleted in new
chr10	76887265	77637642	chr10:76887265-77637642	1	-	76887265	77637642	0	28	250,119,195,131,114,193,225,123,124,94,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,378,	0,2185,4259,22700,27670,57507,61876,64771,66535,82708,124701,131747,140557,152262,185831,192215,197371,199222,203134,221215,222907,225101,233707,296155,297557,363929,516596,749999,
#Partially deleted in new
chr10	76887265	77637642	chr10:76887265-77637642	1	-	76887265	77637642	0	29	250,119,195,131,114,193,225,124,94,87,96,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,378,	0,2185,4259,22700,27670,57507,61876,66535,82708,87221,90277,124701,131747,140557,152262,185831,192215,197371,199222,203134,221215,222907,225101,233707,296155,297557,363929,516596,749999,
#Partially deleted in new
chr10	76887265	77637642	chr10:76887265-77637642	1	-	76887265	77637642	0	29	250,119,195,131,114,193,225,124,94,174,77,87,12,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,378,	0,2185,4259,22700,27670,57507,61876,66535,82708,114141,124701,131747,138180,140557,152262,185831,192215,197371,199222,203134,221215,222907,225101,233707,296155,297557,363929,516596,749999,
#Partially deleted in new
chr10	76887341	77637760	chr10:76887341-77637760	0	-	76887341	77637642	789624	28	174,119,195,131,114,193,225,124,94,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,132,496,	0,2109,4183,22624,27594,57431,61800,66459,82632,124625,131671,140481,152186,185755,192139,197295,199146,203058,221139,222831,225025,233631,296079,297481,363853,516520,606456,749923,
#Partially deleted in new
chr10	76887341	77121020	chr10:76887341-77121020	0	-	76887341	76887341	8553170	23	174,195,131,114,193,225,124,94,9,77,87,12,69,110,156,70,83,106,111,92,171,76,48,	0,4183,22624,27594,57431,61800,66459,82632,120843,124625,131671,138104,140481,152186,185755,192139,197295,199146,203058,221139,222831,225025,233631,
#Partially deleted in new
chr10	76887343	77404021	chr10:76887343-77404021	0	-	76887343	77404021	789624	24	172,119,195,131,114,193,225,124,94,77,87,69,110,156,70,111,92,171,76,76,112,94,62,160,	0,2107,4181,22622,27592,57429,61798,66457,82630,124623,131669,140479,152184,185753,192137,203056,221137,222829,225023,233629,296077,297479,363851,516518,
#Partially deleted in new
chr10	76887343	77637568	chr10:76887343-77637568	0	-	76887343	77637568	789624	29	172,119,195,131,114,193,225,124,94,87,9,77,87,69,110,156,70,83,106,111,92,171,76,76,112,94,62,162,304,	0,2107,4181,22622,27592,57429,61798,66457,82630,87143,120841,124623,131669,140479,152184,185753,192137,197293,199144,203056,221137,222829,225023,233629,296077,297479,363851,516518,749921,
#Partially deleted in new
chr10	76887411	76970999	chr10:76887411-76970999	0	-	76887411	76887411	8553170	10	104,119,195,131,81,114,193,225,124,1026,	0,2039,4113,22554,26645,27524,57361,61730,66389,82562,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	76888043	76905131	chr10:76888043-76905131	1	+	76888043	76888043	8553170	2	238,3328,	0,13760,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	76888061	76901852	chr10:76888061-76901852	1	+	76888061	76888061	8553170	3	220,235,49,	0,1472,13742,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	76888061	76891620	chr10:76888061-76891620	0	+	76888061	76888061	8553170	2	220,216,	0,3343,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	76888075	76978593	chr10:76888075-76978593	0	+	76888075	76888075	789624	4	206,219,195,152,	0,13728,89534,90366,
#Partially deleted in new
chr10	76901299	77019023	chr10:76901299-77019023	0	-	76901299	76901299	8553170	10	537,131,114,193,225,124,94,9,77,11,	0,8666,13636,43473,47842,52501,68674,106885,110667,117713,
#Partially deleted in new
chr10	76901817	76980624	chr10:76901817-76980624	3	+	76901817	76901817	8553170	5	205,106,120,195,1129,	0,37860,73463,75792,77678,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	76939107	76977804	chr10:76939107-76977804	0	+	76939107	76939107	8553170	2	676,195,	0,38502,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	76939159	76949387	chr10:76939159-76949387	0	+	76939159	76939159	8553170	2	624,244,	0,9984,
#Partially deleted in new
chr10	76939677	76949361	chr10:76939677-76949361	0	+	76939677	76939677	8553170	2	106,396,	0,9288,
#Partially deleted in new
chr10	76949161	76973202	chr10:76949161-76973202	0	-	76949161	76949161	8553170	4	205,124,94,157,	0,4639,20812,23884,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	76970027	77079712	chr10:76970027-77079712	0	-	76970027	76970027	8553170	8	40,77,87,69,110,156,70,72,	0,41939,48985,57795,69500,103069,109453,109613,
#Partially deleted in new
chr10	76970036	77140768	chr10:76970036-77140768	0	-	76970036	77140504	789624	15	31,9,77,87,69,110,70,83,106,111,92,171,76,76,475,	0,38148,41930,48976,57786,69491,109444,114600,116451,120363,138444,140136,142330,150936,170257,
#Partially deleted in new
chr10	76973992	77019063	chr10:76973992-77019063	0	-	76974400	77019063	789624	3	581,77,51,	0,37974,45020,
#Partially deleted in new
chr10	76995286	77079550	chr10:76995286-77079550	0	-	76995657	77079550	789624	7	427,77,87,69,110,156,70,	0,16680,23726,32536,44241,77810,84194,
#Partially deleted in new
chr10	77011993	77637335	chr10:77011993-77637335	0	-	77027877	77637335	789624	15	50,87,12,69,110,111,92,171,76,76,112,94,62,162,71,	0,7019,13452,15829,27534,78406,96487,98179,100373,108979,171427,172829,239201,391868,625271,
#Partially deleted in new
chr10	77012026	77404023	chr10:77012026-77404023	0	-	77249603	77404023	789624	18	17,87,69,110,156,70,83,106,111,92,171,76,76,112,94,115,62,162,	0,6986,15796,27501,61070,67454,72610,74461,78373,96454,98146,100340,108946,171394,172796,237538,239168,391835,
#Partially deleted in new
chr10	77012197	77092170	chr10:77012197-77092170	1	-	77012481	77084641	789624	9	360,87,69,110,156,70,79,106,1771,	0,6815,15625,27330,60899,67283,72439,74290,78202,
#Partially deleted in new
chr10	77012198	77078072	chr10:77012198-77078072	0	-	77012198	77012198	8553170	6	359,87,69,110,156,231,	0,6814,15624,27329,60898,65643,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr10	77039122	77637483	chr10:77039122-77637483	0	-	77587853	77637483	789624	18	194,110,156,70,83,106,111,92,171,76,76,112,94,62,162,142,88,219,	0,405,33974,40358,45514,47365,51277,69358,71050,73244,81850,144298,145700,212072,364739,547194,548661,598142,
#Partially deleted in new
chr10	77063673	77637731	chr10:77063673-77637731	1	-	77064137	77637642	789624	15	470,156,70,83,106,111,92,171,76,76,112,94,62,162,467,	0,9423,15807,20963,22814,26726,44807,46499,48693,57299,119747,121149,187521,340188,573591,
#Partially deleted in new
chr10	77071225	77079550	chr10:77071225-77079550	0	-	77071597	77079550	789624	3	420,156,70,	0,1871,8255,
#Partially deleted in new
chr10	77073235	77090722	chr10:77073235-77090722	0	-	77073235	77084641	789624	5	17,70,83,106,323,	0,6245,11401,13252,17164,
#Partially deleted in new
chr10	77147651	77150100	chr10:77147651-77150100	3	+	77147651	77147651	789624	2	167,260,	0,2189,
#Partially deleted in new
chr10	77148291	77150100	chr10:77148291-77150100	0	+	77148291	77148291	8553170	2	30,260,	0,1549,
#Partially deleted in new
chr10	77183472	77498970	chr10:77183472-77498970	0	-	77183472	77183472	8553170	6	60,94,62,162,132,387,	0,1350,67722,220389,310325,315111,
#Partially deleted in new
chr10	77183476	77350761	chr10:77183476-77350761	0	-	77183476	77183476	8553170	4	56,94,62,433,	0,1346,67718,166852,
#Partially deleted in new
chr10	77249430	77498970	chr10:77249430-77498970	0	-	77249430	77249430	8553170	4	1826,162,132,387,	0,154431,244367,249153,
#Partially deleted in new
chr10	77249529	77309618	chr10:77249529-77309618	0	-	77249529	77249529	8553170	2	1727,139,	0,59950,
#Deleted in new
chr10	77313940	77315694	chr10:77313940-77315694	3	+	77313940	77313940	8553170	2	179,239,	0,1515,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	77354403	77376613	chr10:77354403-77376613	3	+	77354403	77354403	789624	5	216,60,101,139,185,	0,765,18443,19293,22025,
#Deleted in new
chr10	77433571	77433782	chr10:77433571-77433782	7	-	77433571	77433571	16724991	1	211,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	77587048	77587159	chr10:77587048-77587159	7	+	77587048	77587048	16724991	1	111,	0,
#Deleted in new
chr10	77634109	77637821	chr10:77634109-77637821	1	-	77636386	77637642	0	2	2406,557,	0,3155,
#Deleted in new
chr10	77636198	77637789	chr10:77636198-77637789	1	-	77636560	77637642	789624	2	371,525,	0,1066,
#Deleted in new
chr10	77636198	77637725	chr10:77636198-77637725	1	-	77636742	77637642	789624	2	808,461,	0,1066,
#Duplicated in new
chr10	77730765	77734769	chr10:77730765-77734769	7	+	77730765	77730765	16724991	2	711,3000,	0,1004,
#Deleted in new
chr10	77738245	77739015	chr10:77738245-77739015	7	+	77738245	77738245	16724991	1	770,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	77776950	77777055	chr10:77776950-77777055	3	-	77776950	77776950	8553170	1	105,	0,
#Deleted in new
chr10	77780336	77781876	chr10:77780336-77781876	7	-	77780336	77780336	16724991	1	1540,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	77782865	77793176	chr10:77782865-77793176	3	+	77782865	77782865	8553170	2	464,1564,	0,8747,
#Deleted in new
chr10	77783165	77783881	chr10:77783165-77783881	0	+	77783165	77783165	8553170	1	716,	0,
#Deleted in new
chr10	77790660	77791647	chr10:77790660-77791647	0	+	77790660	77790660	8553170	1	987,	0,
#Partially deleted in new
chr10	77790790	77926526	chr10:77790790-77926526	3	-	77792439	77926520	0	32	1753,110,110,128,144,197,171,149,184,141,134,163,151,90,113,145,124,1020,93,104,176,128,133,126,185,313,260,184,144,163,69,310,	0,3217,4058,5270,5660,14874,15967,17005,18756,20303,21133,21424,25760,26216,26986,28530,29104,30291,33593,38091,38564,39426,39950,43123,44947,51090,52656,62563,63436,65939,78338,135426,
#Partially deleted in new
chr10	77790790	77829442	chr10:77790790-77829442	0	-	77792439	77829442	789624	20	1753,110,110,128,144,197,171,149,184,141,134,163,151,90,113,145,124,93,104,88,	0,3217,4058,5270,5660,14874,15967,17005,18756,20303,21133,21424,25760,26216,26986,28530,29104,33593,38091,38564,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr10	77790790	77869191	chr10:77790790-77869191	0	-	77790790	77790790	8553170	22	1753,110,110,128,144,197,171,149,184,141,134,163,151,90,113,2781,93,104,176,128,133,93,	0,3217,4058,5270,5660,14874,15967,17005,18756,20303,21133,21424,25760,26216,26986,28530,33593,38091,38564,39426,39950,78308,
#Partially deleted in new
chr10	77791900	77820048	chr10:77791900-77820048	0	-	77791900	77791900	8553170	17	643,110,110,128,144,197,171,149,184,141,134,163,151,90,113,145,154,	0,2107,2948,4160,4550,13764,14857,15895,17646,19193,20023,20314,24650,25106,25876,27420,27994,
#Partially deleted in new
chr10	77793543	77821538	chr10:77793543-77821538	0	-	77793543	77793543	8553170	17	574,110,128,144,197,171,141,184,141,134,163,151,90,113,145,124,457,	0,1305,2517,2907,12121,13214,14252,16003,17550,18380,18671,23007,23463,24233,25777,26351,27538,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr10	77796060	77889507	chr10:77796060-77889507	0	-	77845431	77889507	789624	30	128,144,264,171,149,184,141,134,163,151,90,113,145,124,1020,93,104,176,128,133,126,185,313,260,227,184,144,163,69,79,	0,390,9604,10697,11735,13486,15033,15863,16154,20490,20946,21716,23260,23834,25021,28323,32821,33294,34156,34680,37853,39677,45820,47386,49150,57293,58166,60669,73068,93368,
#Partially deleted in new
chr10	77806104	77812229	chr10:77806104-77812229	0	-	77806104	77806104	8553170	7	67,171,149,184,141,134,15,	0,653,1691,3442,4989,5819,6110,
#Deleted in new
chr10	77806795	77807977	chr10:77806795-77807977	0	-	77806795	77806795	8553170	2	133,182,	0,1000,
#Deleted in new
chr10	77816032	77820021	chr10:77816032-77820021	0	-	77816032	77816032	8553170	5	143,151,90,113,701,	0,518,974,1744,3288,
#Partially deleted in new
chr10	77821781	77824730	chr10:77821781-77824730	0	-	77821781	77821781	8553170	2	320,347,	0,2602,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	77866874	77869610	chr10:77866874-77869610	3	+	77866874	77866874	8553170	2	234,1688,	0,1048,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	77912270	77912545	chr10:77912270-77912545	3	-	77912270	77912270	8553170	1	275,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	77927371	77929824	chr10:77927371-77929824	3	+	77927371	77927371	8553170	2	251,236,	0,2217,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	77927630	77929824	chr10:77927630-77929824	0	+	77927630	77927630	789624	1	2194,	0,
#Partially deleted in new
chr10	77953494	77953876	chr10:77953494-77953876	7	+	77953494	77953494	16724991	1	382,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	77966172	77966440	chr10:77966172-77966440	3	+	77966172	77966172	8553170	1	268,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	77969250	77985320	chr10:77969250-77985320	1	-	77970038	77982694	789624	8	805,133,132,165,165,59,58,151,	0,10890,12177,12903,13402,14669,14990,15919,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr10	77975148	78029545	chr10:77975148-78029545	3	-	77977477	78029407	789624	31	2478,133,132,165,165,93,94,171,83,87,114,171,138,119,112,173,165,139,128,70,141,142,104,137,163,240,155,172,138,136,182,	0,4992,6279,7005,7504,8771,9056,10021,10754,10924,15905,18048,24832,25827,27048,29567,32553,34388,34715,35322,38501,42426,44013,46397,46711,46996,49400,49822,50473,50945,54215,
#Partially deleted in new
chr10	77991108	78009667	chr10:77991108-78009667	0	-	77991108	77991108	8553170	5	59,171,173,165,131,	0,2088,13607,16593,18428,
#Partially deleted in new
chr10	78002196	78019252	chr10:78002196-78019252	0	-	78007839	78019252	789624	8	112,173,165,128,70,141,142,91,	0,2519,5505,7667,8274,11453,15378,16965,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	78013085	78020173	chr10:78013085-78020173	0	-	78013085	78013085	8553170	3	705,142,1012,	0,4489,6076,
#Partially deleted in new
chr10	78033731	78040716	chr10:78033731-78040716	1	+	78033901	78040206	0	6	173,66,210,111,22,102,	0,1620,1779,3462,6472,6883,
#Partially deleted in new
chr10	78033759	78040713	chr10:78033759-78040713	1	+	78033901	78040206	789624	6	145,66,210,111,25,99,	0,1592,1751,3434,6441,6855,
#Partially deleted in new
chr10	78033759	78040716	chr10:78033759-78040716	3	+	78033901	78040626	0	5	145,66,210,111,102,	0,1592,1751,3434,6855,
#Partially deleted in new
chr10	78033835	78040701	chr10:78033835-78040701	1	+	78033901	78037970	789624	7	69,66,210,111,18,22,87,	0,1516,1675,3358,4129,6368,6779,
#Partially deleted in new
chr10	78033862	78040697	chr10:78033862-78040697	1	+	78033901	78040206	789624	7	42,66,210,111,3,22,83,	0,1489,1648,3331,3576,6341,6752,
#Partially deleted in new
chr10	78033862	78040716	chr10:78033862-78040716	1	+	78033901	78040206	0	6	42,66,210,111,22,102,	0,1489,1648,3331,6341,6752,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	78033862	78056813	chr10:78033862-78056813	1	+	78033901	78055010	0	5	42,66,210,111,2283,	0,1489,1648,3331,20668,
#Partially deleted in new
chr10	78033862	78040696	chr10:78033862-78040696	1	+	78033901	78037970	0	8	42,66,210,111,3,18,22,82,	0,1489,1648,3331,3576,4102,6341,6752,
#Partially deleted in new
chr10	78033862	78037883	chr10:78033862-78037883	0	+	78033862	78033862	8553170	4	42,66,210,690,	0,1489,1648,3331,
#Partially deleted in new
chr10	78033862	78038104	chr10:78033862-78038104	0	+	78033862	78033862	8553170	5	42,66,210,111,140,	0,1489,1648,3331,4102,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	78033873	78040716	chr10:78033873-78040716	0	+	78033873	78033873	8553170	6	31,66,210,111,2787,102,	0,1478,1637,3320,3565,6741,
#Partially deleted in new
chr10	78033876	78054676	chr10:78033876-78054676	0	+	78033901	78049088	789624	6	28,66,210,111,245,146,	0,1475,1634,3317,15104,20654,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	78033885	78036529	chr10:78033885-78036529	0	+	78033885	78033885	8553170	3	19,66,1019,	0,1466,1625,
#Partially deleted in new
chr10	78033890	78049164	chr10:78033890-78049164	0	+	78033890	78033890	8553170	6	14,66,210,111,133,184,	0,1461,1620,3303,6724,15090,
#Partially deleted in new
chr10	78033903	78037218	chr10:78033903-78037218	0	+	78033903	78033903	8553170	4	413,66,210,25,	0,1448,1607,3290,
#Partially deleted in new
chr10	78033916	78040696	chr10:78033916-78040696	0	+	78033916	78033916	8553170	5	70,66,210,111,82,	0,1435,1594,3277,6698,
#Partially deleted in new
chr10	78034209	78035837	chr10:78034209-78035837	0	+	78034209	78034209	8553170	3	212,66,327,	0,1142,1301,
#Partially deleted in new
chr10	78035565	78040697	chr10:78035565-78040697	0	+	78035565	78037970	789624	5	155,111,29,22,83,	0,1628,2399,4638,5049,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	78038555	78040701	chr10:78038555-78040701	0	+	78038555	78038555	8553170	1	2146,	0,
#Partially deleted in new
chr10	78068622	78069538	chr10:78068622-78069538	7	-	78068622	78068622	16724991	1	916,	0,
#Deleted in new
chr10	78176927	78178186	chr10:78176927-78178186	3	+	78176927	78176927	8553170	1	1259,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	78179173	78527338	chr10:78179173-78527338	1	+	78179173	78179173	8553170	4	73,185,155,46,	0,286820,346156,348119,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	78179184	78542627	chr10:78179184-78542627	3	+	78179184	78179184	8553170	5	62,155,295,64,75,	0,346145,348108,349566,363368,
#Partially deleted in new
chr10	78179191	78330808	chr10:78179191-78330808	0	+	78179191	78179191	8553170	2	55,716,	0,150901,
#Partially deleted in new
chr10	78179192	78353329	chr10:78179192-78353329	0	+	78179192	78179192	8553170	2	54,238,	0,173899,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	78179195	78396552	chr10:78179195-78396552	1	+	78179195	78179195	8553170	4	51,154,202,142,	0,31649,34618,217215,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	78179197	78214996	chr10:78179197-78214996	0	+	78179197	78179197	8553170	2	49,1183,	0,34616,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	78238254	78675109	chr10:78238254-78675109	3	+	78238254	78238254	8553170	3	50,64,421,	0,290496,436434,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	78248739	78551355	chr10:78248739-78551355	0	+	78248739	78248739	8553170	4	331,155,64,718,	0,276590,280011,301898,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	78248747	78252645	chr10:78248747-78252645	1	+	78248747	78248747	789624	2	323,2369,	0,1529,
#Partially deleted in new
chr10	78248807	78250451	chr10:78248807-78250451	0	+	78248807	78248807	8553170	2	263,175,	0,1469,
#Partially deleted in new
chr10	78248807	78353336	chr10:78248807-78353336	1	+	78248807	78248807	8553170	3	263,175,245,	0,1469,104284,
#Partially deleted in new
chr10	78267309	78279707	chr10:78267309-78279707	1	+	78267309	78267309	8553170	4	177,76,169,113,	0,2724,3116,12285,
#Partially deleted in new
chr10	78267327	78278065	chr10:78267327-78278065	0	+	78267327	78267327	8553170	3	159,76,149,	0,2706,10589,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	78267341	78396465	chr10:78267341-78396465	1	+	78267341	78267341	8553170	3	145,362,55,	0,113051,129069,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	78267378	78302046	chr10:78267378-78302046	0	+	78267378	78267378	8553170	2	108,696,	0,33972,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	78267409	78280213	chr10:78267409-78280213	1	+	78267409	78267409	789624	3	77,96,619,	0,11989,12185,
#Partially deleted in new
chr10	78267441	78330595	chr10:78267441-78330595	0	+	78267441	78267441	8553170	2	45,503,	0,62651,
#Partially deleted in new
chr10	78293841	78301003	chr10:78293841-78301003	3	+	78293841	78293841	8553170	2	124,396,	0,6766,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	78301193	78330708	chr10:78301193-78330708	1	+	78301193	78301193	8553170	2	928,616,	0,28899,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	78352596	78356100	chr10:78352596-78356100	3	+	78352596	78352596	8553170	2	213,168,	0,3336,
#Deleted in new
chr10	78367506	78367623	chr10:78367506-78367623	3	+	78367506	78367506	8553170	1	117,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	78406543	78550857	chr10:78406543-78550857	1	+	78406543	78406543	8553170	4	156,155,64,220,	0,118786,122207,144094,
#Partially deleted in new
chr10	78538390	78551719	chr10:78538390-78551719	3	-	78538390	78538390	8553170	3	383,84,105,	0,11309,13224,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	78696061	78697022	chr10:78696061-78697022	3	-	78696061	78696061	8553170	2	288,291,	0,670,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	78943327	78962394	chr10:78943327-78962394	1	-	78943327	78943327	8553170	4	1420,78,212,1141,	0,2584,17177,17926,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	78943327	79067895	chr10:78943327-79067895	3	-	78943327	78943327	789624	10	1420,78,154,151,63,159,133,73,139,508,	0,2584,17926,18571,19496,105446,111268,122419,123120,124060,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	79000483	79003803	chr10:79000483-79003803	3	-	79000483	79000483	8553170	2	1753,265,	0,3055,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	79044147	79067468	chr10:79044147-79067468	1	-	79044147	79044147	8553170	5	365,159,136,73,81,	0,4626,6134,21599,23240,
#Partially deleted in new
chr10	79069034	79316519	chr10:79069034-79316519	3	+	79201632	79312749	0	25	236,110,96,81,109,114,106,145,115,218,199,273,183,78,175,142,211,106,161,68,69,245,167,261,3878,	0,49880,70647,93018,132549,139301,147134,208146,220740,221924,223123,224346,227436,228578,229371,230015,231697,233072,234980,236129,236498,237065,238370,241889,243607,
#Partially deleted in new
chr10	79201594	79315753	chr10:79201594-79315753	1	+	79201632	79314258	789624	6	98,114,106,145,33,1700,	0,6741,14574,75586,88180,112459,
#Partially deleted in new
chr10	79243668	79291085	chr10:79243668-79291085	0	+	79243668	79243668	8553170	4	70,145,115,127,	0,33512,46106,47290,
#Partially deleted in new
chr10	79277178	79296935	chr10:79277178-79296935	0	+	79277178	79277178	8553170	5	147,115,218,199,3573,	0,12596,13780,14979,16184,
#Partially deleted in new
chr10	79285452	79316528	chr10:79285452-79316528	1	+	79285452	79312749	789624	20	169,113,52,218,123,83,193,183,78,175,136,211,106,158,68,66,242,164,261,3887,	0,4324,5292,5506,6781,7328,8008,11018,12160,12953,13600,15279,16654,18565,19711,20083,20650,21955,25471,27189,
#Deleted in new
chr10	79347468	79353706	chr10:79347468-79353706	0	+	79347548	79351609	789624	6	275,31,89,228,76,62,	0,1607,2196,4018,4848,6176,
#Deleted in new
chr10	79347468	79351609	chr10:79347468-79351609	0	+	79347468	79347468	8553170	4	275,31,89,123,	0,1607,2196,4018,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	79347477	79355337	chr10:79347477-79355337	3	+	79347548	79353842	0	6	266,31,89,97,76,1631,	0,1598,2187,4009,4839,6229,
#Deleted in new
chr10	79347499	79350035	chr10:79347499-79350035	0	+	79347499	79347499	8553170	3	244,31,371,	0,1576,2165,
#Deleted in new
chr10	79347657	79354086	chr10:79347657-79354086	0	+	79347657	79353762	789624	6	86,31,89,97,76,442,	0,1418,2007,3829,4659,5987,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	79382324	79445627	chr10:79382324-79445627	3	-	79386344	79445440	789624	4	4134,165,201,433,	0,11951,50233,62870,
#Partially deleted in new
chr10	79382327	79409274	chr10:79382327-79409274	3	+	79382327	79382327	8553170	2	259,252,	0,26695,
#Partially deleted in new
chr10	79386036	79444219	chr10:79386036-79444219	1	-	79386204	79444168	789624	4	422,165,201,118,	0,8239,46521,58065,
#Deleted in new
chr10	79499665	79499984	chr10:79499665-79499984	7	-	79499665	79499665	16724991	1	319,	0,
#Partially deleted in new
chr10	79504072	79506281	chr10:79504072-79506281	3	-	79504072	79504072	8553170	2	138,195,	0,2014,
#Deleted in new
chr10	79507596	79510922	chr10:79507596-79510922	5	-	79507596	79507596	16724991	3	189,62,116,	0,2932,3210,
#Deleted in new
chr10	79507602	79510982	chr10:79507602-79510982	7	-	79507602	79507602	16724991	3	449,38,176,	0,3056,3204,
#Deleted in new
chr10	79507693	79510560	chr10:79507693-79510560	4	-	79507693	79507693	16724991	2	358,32,	0,2835,
#Deleted in new
chr10	79510544	79510683	chr10:79510544-79510683	5	-	79510544	79510544	16724991	1	139,	0,
#Deleted in new
chr10	79512600	79516440	chr10:79512600-79516440	3	+	79512649	79513114	789624	1	3840,	0,
#Deleted in new
chr10	79526507	79526631	chr10:79526507-79526631	7	-	79526507	79526507	16724991	1	124,	0,
#Deleted in new
chr10	79544086	79544356	chr10:79544086-79544356	7	+	79544086	79544086	16724991	1	270,	0,
#Deleted in new
chr10	79555851	79560395	chr10:79555851-79560395	3	-	79557208	79559483	789624	6	1734,78,120,195,30,32,	0,2200,3034,3460,4117,4512,
#Deleted in new
chr10	79557186	79560386	chr10:79557186-79560386	1	-	79557208	79559483	789624	5	399,78,120,195,23,	0,865,1699,2125,3177,
#Deleted in new
chr10	79557481	79560397	chr10:79557481-79560397	0	-	79557481	79559483	789624	6	104,78,120,195,195,34,	0,570,1404,1830,2487,2882,
#Deleted in new
chr10	79558884	79559834	chr10:79558884-79559834	0	-	79558884	79559483	789624	2	121,523,	0,427,
#Deleted in new
chr10	79559413	79560402	chr10:79559413-79560402	1	-	79559414	79559689	789624	3	93,63,39,	0,254,950,
#Deleted in new
chr10	79582297	79584877	chr10:79582297-79584877	7	-	79582297	79582297	16724991	4	368,71,117,88,	0,1041,1962,2492,
#Deleted in new
chr10	79595293	79595660	chr10:79595293-79595660	7	-	79595293	79595293	16724991	1	367,	0,
#Deleted in new
chr10	79610938	79615440	chr10:79610938-79615440	1	+	79611825	79614113	789624	6	44,71,195,120,78,1704,	0,380,864,1373,2250,2798,
#Deleted in new
chr10	79610938	79615440	chr10:79610938-79615440	1	+	79611825	79614113	789624	5	44,195,120,78,1704,	0,864,1373,2250,2798,
#Deleted in new
chr10	79610944	79615455	chr10:79610944-79615455	3	+	79611619	79614113	789624	6	38,60,195,120,78,1719,	0,637,858,1367,2244,2792,
#Deleted in new
chr10	79610952	79613840	chr10:79610952-79613840	0	+	79611825	79613840	789624	5	30,195,120,78,104,	0,850,1359,2236,2784,
#Deleted in new
chr10	79610954	79613840	chr10:79610954-79613840	0	+	79611825	79613840	789624	6	28,71,195,120,78,104,	0,364,848,1357,2234,2782,
#Deleted in new
chr10	79610960	79611898	chr10:79610960-79611898	0	+	79610960	79610960	8553170	2	22,320,	0,618,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	79628756	79632188	chr10:79628756-79632188	3	-	79628756	79628756	789624	3	300,99,207,	0,2079,3225,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	79630754	79632186	chr10:79630754-79632186	0	-	79630754	79630754	8553170	2	180,205,	0,1227,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	79660890	79677996	chr10:79660890-79677996	3	+	79660890	79660890	8553170	5	104,74,87,43,1529,	0,5894,8597,10200,15577,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	79663087	79766324	chr10:79663087-79766324	1	-	79663087	79663087	8553170	4	147,98,67,54,	0,2409,5298,103183,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	79663191	79664786	chr10:79663191-79664786	3	+	79663191	79663191	8553170	1	1595,	0,
#Partially deleted in new
chr10	79667996	79766324	chr10:79667996-79766324	0	-	79667996	79667996	8553170	2	456,54,	0,98274,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	79681972	79684094	chr10:79681972-79684094	3	-	79681972	79681972	8553170	1	2122,	0,
#Partially deleted in new
chr10	79682996	79685436	chr10:79682996-79685436	7	+	79682996	79682996	16724991	1	2440,	0,
#Partially deleted in new
chr10	79684493	79684983	chr10:79684493-79684983	7	-	79684493	79684493	16724991	1	490,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	79691501	79826516	chr10:79691501-79826516	3	-	79691501	79691501	789624	7	555,54,43,84,74,104,319,	0,74769,112983,114537,117257,123111,134696,
#Partially deleted in new
chr10	79703226	79712757	chr10:79703226-79712757	3	+	79703609	79712485	789624	7	765,700,129,140,383,117,1058,	0,2815,5472,6573,7155,8023,8473,
#Partially deleted in new
chr10	79703278	79714681	chr10:79703278-79714681	1	+	79703810	79712932	789624	7	713,700,129,140,383,117,1788,	0,2763,5420,6521,7103,7971,9615,
#Partially deleted in new
chr10	79706327	79712755	chr10:79706327-79712755	0	+	79706327	79712485	789624	6	414,129,140,383,117,1056,	0,2371,3472,4054,4922,5372,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	79716444	79826299	chr10:79716444-79826299	1	-	79716444	79716444	8553170	6	7210,98,54,43,104,102,	0,7470,49826,88040,98168,109753,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	79762709	79786443	chr10:79762709-79786443	1	-	79762709	79762709	8553170	2	3615,626,	0,23108,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	79766052	79826484	chr10:79766052-79826484	0	-	79766052	79766052	789624	6	272,43,84,74,104,287,	0,38432,39986,42706,48560,60145,
#Partially deleted in new
chr10	79766289	79826404	chr10:79766289-79826404	0	-	79766289	79766289	8553170	5	35,43,74,104,207,	0,38195,42469,48323,59908,
#Partially deleted in new
chr10	79797833	79814644	chr10:79797833-79814644	0	-	79797833	79797833	8553170	5	194,43,84,74,32,	0,6651,8205,10925,16779,
#Partially deleted in new
chr10	79797833	79826353	chr10:79797833-79826353	0	-	79797833	79797833	789624	5	194,43,84,104,156,	0,6651,8205,16779,28364,
#Partially deleted in new
chr10	79804056	79814654	chr10:79804056-79814654	0	-	79804056	79804056	8553170	2	471,42,	0,10556,
#Partially deleted in new
chr10	79804056	79806122	chr10:79804056-79806122	0	-	79804056	79804056	8553170	2	471,84,	0,1982,
#Partially deleted in new
chr10	79804484	79825782	chr10:79804484-79825782	0	-	79804484	79804484	8553170	5	43,84,74,104,495,	0,1554,4274,10128,20803,
#Partially deleted in new
chr10	79804484	79826594	chr10:79804484-79826594	0	-	79804484	79804484	8553170	5	43,84,201,104,397,	0,1554,4278,10128,21713,
#Partially deleted in new
chr10	79825901	79827602	chr10:79825901-79827602	3	+	79825901	79825901	789624	1	1701,	0,
#Partially deleted in new
chr10	79841357	79850878	chr10:79841357-79850878	3	+	79841740	79850606	789624	7	765,700,129,140,383,117,1058,	0,2815,5472,6573,7155,8013,8463,
#Partially deleted in new
chr10	79841357	79850876	chr10:79841357-79850876	1	+	79841740	79849613	789624	6	765,700,129,140,383,1506,	0,2815,5472,6573,7155,8013,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	79860572	79861806	chr10:79860572-79861806	7	+	79860572	79860572	16724991	1	1234,	0,
#Partially deleted in new
chr10	79870374	79873903	chr10:79870374-79873903	7	-	79870374	79870374	16724991	7	100,118,163,225,147,123,126,	0,614,1324,1967,2412,2659,3403,
#Deleted in new
chr10	79892147	79893175	chr10:79892147-79893175	7	-	79892147	79892147	16724991	1	1028,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	79904897	79951029	chr10:79904897-79951029	3	+	79904897	79904897	789624	8	152,209,189,117,75,93,126,1002,	0,1674,2770,16054,17016,26828,31633,45130,
#Deleted in new
chr10	79906604	79907856	chr10:79906604-79907856	7	+	79906604	79906604	16724991	2	176,189,	0,1063,
#Deleted in new
chr10	79920177	79923119	chr10:79920177-79923119	7	+	79920177	79920177	16724991	3	891,75,458,	0,1736,2484,
#Deleted in new
chr10	79920326	79923032	chr10:79920326-79923032	5	+	79920326	79920326	16724991	4	195,117,75,371,	0,625,1587,2335,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	79931710	79950336	chr10:79931710-79950336	0	+	79931710	79931710	8553170	4	108,126,99,309,	0,4820,9726,18317,
#Partially deleted in new
chr10	79937739	79949103	chr10:79937739-79949103	3	-	79937851	79946659	0	8	489,84,117,117,117,117,202,38,	0,2965,3658,4214,4648,5023,8721,11326,
#Partially deleted in new
chr10	79941448	79982614	chr10:79941448-79982614	0	-	79941448	79982610	789624	6	66,117,117,117,202,40,	0,505,939,1314,5012,41126,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	79968212	79973213	chr10:79968212-79973213	3	+	79968212	79968212	8553170	1	5001,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	79970962	79973213	chr10:79970962-79973213	3	-	79970962	79970962	8553170	1	2251,	0,
#Partially deleted in new
chr10	79981838	79982212	chr10:79981838-79982212	7	+	79981838	79981838	16724991	1	374,	0,
#Partially deleted in new
chr10	79982909	79983240	chr10:79982909-79983240	7	-	79982909	79982909	16724991	1	331,	0,
#Partially deleted in new
chr10	80017712	80017911	chr10:80017712-80017911	7	-	80017712	80017712	16724991	1	199,	0,
#Deleted in new
chr10	80024736	80025159	chr10:80024736-80025159	7	-	80024736	80024736	16724991	1	423,	0,
#Deleted in new
chr10	80031967	80032393	chr10:80031967-80032393	7	-	80031967	80031967	16724991	1	426,	0,
#Partially deleted in new
chr10	80040620	80041044	chr10:80040620-80041044	7	-	80040620	80040620	16724991	1	424,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	80046859	80078895	chr10:80046859-80078895	3	-	80046859	80046859	789624	6	2319,191,211,87,144,169,	0,6536,9056,9459,13930,31867,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	80047706	80078844	chr10:80047706-80078844	0	-	80047706	80047706	789624	4	1472,191,118,118,	0,5689,13109,31020,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	80047721	80078912	chr10:80047721-80078912	0	-	80047721	80047721	789624	5	1457,191,211,144,186,	0,5674,8194,13068,31005,
#Deleted in new
chr10	80053427	80053548	chr10:80053427-80053548	7	-	80053427	80053427	16724991	1	121,	0,
#Partially deleted in new
chr10	80078645	80090412	chr10:80078645-80090412	1	+	80078699	80090412	789624	5	141,104,60,28,33,	0,3195,3499,7585,11734,
#Partially deleted in new
chr10	80078645	80091302	chr10:80078645-80091302	0	+	80078645	80078645	8553170	4	141,104,73,506,	0,3195,3499,12151,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	80078645	80092550	chr10:80078645-80092550	1	+	80078699	80082164	789624	5	141,95,104,60,1754,	0,2994,3195,3499,12151,
#Partially deleted in new
chr10	80078669	80092557	chr10:80078669-80092557	3	+	80078699	80090917	789624	4	117,104,60,1761,	0,3171,3475,12127,
#Partially deleted in new
chr10	80078681	80091335	chr10:80078681-80091335	1	+	80078699	80090383	789624	5	105,104,60,52,539,	0,3159,3463,11698,12115,
#Partially deleted in new
chr10	80078691	80090938	chr10:80078691-80090938	1	+	80078699	80090412	789624	6	95,104,60,28,52,142,	0,3149,3453,7539,11688,12105,
#Partially deleted in new
chr10	80079035	80092557	chr10:80079035-80092557	0	+	80079035	80090917	789624	4	149,104,60,1761,	0,2805,3109,11761,
#Partially deleted in new
chr10	80079269	80092557	chr10:80079269-80092557	0	+	80079269	80079269	789624	4	38,104,60,1761,	0,2571,2875,11527,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	80079272	80091349	chr10:80079272-80091349	0	+	80079272	80079272	789624	5	35,95,104,60,553,	0,2367,2568,2872,11524,
#Partially deleted in new
chr10	80079294	80091352	chr10:80079294-80091352	0	+	80079294	80079294	789624	5	13,104,60,52,556,	0,2546,2850,11085,11502,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	80079327	80091050	chr10:80079327-80091050	0	+	80079327	80079327	8553170	5	365,95,104,60,254,	0,2312,2513,2817,11469,
#Partially deleted in new
chr10	80081702	80086441	chr10:80081702-80086441	0	+	80081702	80081702	8553170	4	32,104,60,211,	0,138,442,4528,
#Partially deleted in new
chr10	80081722	80091332	chr10:80081722-80091332	0	+	80081722	80090917	789624	4	19,104,60,536,	0,118,422,9074,
#Deleted in new
chr10	80091410	80091867	chr10:80091410-80091867	3	-	80091410	80091410	8553170	1	457,	0,
#Deleted in new
chr10	80125940	80126317	chr10:80125940-80126317	7	+	80125940	80125940	16724991	1	377,	0,
#Partially deleted in new
chr10	80131681	80145064	chr10:80131681-80145064	1	+	80142143	80144910	789624	4	150,98,121,165,	0,10400,12541,13218,
#Partially deleted in new
chr10	80132590	80145037	chr10:80132590-80145037	1	+	80132762	80145001	789624	3	236,98,138,	0,9491,12309,
#Partially deleted in new
chr10	80132720	80145359	chr10:80132720-80145359	3	+	80132762	80144910	789624	4	106,98,121,460,	0,9361,11502,12179,
#Partially deleted in new
chr10	80144047	80145030	chr10:80144047-80145030	0	+	80144047	80144047	8553170	2	296,131,	0,852,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr10	80150888	80205572	chr10:80150888-80205572	1	-	80155852	80172861	789624	15	5024,123,59,96,94,57,80,91,114,95,88,390,116,63,230,	0,6752,7078,8211,11046,12460,12645,13164,15195,16001,16337,18080,19911,21918,54454,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr10	80150888	80205572	chr10:80150888-80205572	3	-	80155852	80172861	789624	17	5024,123,59,96,94,57,80,91,114,95,88,390,116,63,49,196,230,	0,6752,7078,8211,11046,12460,12645,13164,15195,16001,16337,18080,19911,21918,25218,30052,54454,
#Partially deleted in new
chr10	80155123	80172871	chr10:80155123-80172871	1	-	80155852	80170871	789624	15	789,123,59,96,94,57,80,91,114,95,88,390,116,269,65,	0,2517,2843,3976,6811,8225,8410,8929,10960,11766,12102,13845,15676,16489,17683,
#Partially deleted in new
chr10	80155123	80205572	chr10:80155123-80205572	1	-	80155852	80172861	789624	16	789,123,59,96,94,57,80,91,114,95,88,390,116,63,49,230,	0,2517,2843,3976,6811,8225,8410,8929,10960,11766,12102,13845,15676,17683,20983,50219,
#Partially deleted in new
chr10	80155587	80158018	chr10:80155587-80158018	0	-	80155587	80155587	8553170	2	325,52,	0,2379,
#Partially deleted in new
chr10	80155639	80162012	chr10:80155639-80162012	0	-	80156408	80162012	789624	6	273,121,123,59,96,78,	0,738,2001,2327,3460,6295,
#Partially deleted in new
chr10	80166398	80169087	chr10:80166398-80169087	0	-	80166398	80166398	8553170	3	586,88,119,	0,827,2570,
#Partially deleted in new
chr10	80169079	80173021	chr10:80169079-80173021	0	-	80169079	80172861	789624	3	279,116,215,	0,1720,3727,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	80172833	80205522	chr10:80172833-80205522	0	-	80172833	80172833	8553170	4	36,49,515,180,	0,3273,8107,32509,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	80181101	80204919	chr10:80181101-80204919	0	-	80181101	80181101	8553170	3	354,102,94,	0,14629,23724,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	80207709	80219657	chr10:80207709-80219657	3	+	80207709	80207709	789624	2	522,1639,	0,10309,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	80208208	80218614	chr10:80208208-80218614	0	+	80208208	80208208	8553170	2	33,596,	0,9810,
#Deleted in new
chr10	80215850	80216119	chr10:80215850-80216119	7	-	80215850	80215850	16724991	1	269,	0,
#Partially deleted in new
chr10	80233663	80245367	chr10:80233663-80245367	7	+	80233663	80233663	16724991	5	120,82,144,84,199,	0,1615,9018,11308,11505,
#Deleted in new
chr10	80247218	80247683	chr10:80247218-80247683	7	-	80247218	80247218	16724991	1	465,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	80249709	80254121	chr10:80249709-80254121	3	+	80249709	80249709	8553170	1	4412,	0,
#Partially deleted in new
chr10	80271819	80289684	chr10:80271819-80289684	3	-	80273780	80289423	0	9	2064,134,183,219,144,113,123,78,352,	0,2700,3197,4556,8353,8860,12096,13692,17513,
#Deleted in new
chr10	80271819	80275479	chr10:80271819-80275479	0	-	80271819	80271819	8553170	3	2064,134,463,	0,2700,3197,
#Deleted in new
chr10	80272057	80275199	chr10:80272057-80275199	0	-	80272057	80272057	8553170	5	29,141,303,134,183,	0,382,1523,2462,2959,
#Partially deleted in new
chr10	80276519	80289357	chr10:80276519-80289357	0	-	80276519	80289357	789624	5	75,144,113,78,25,	0,3653,4160,8992,12813,
#Partially deleted in new
chr10	80297719	80299655	chr10:80297719-80299655	7	+	80297719	80297719	16724991	2	154,1472,	0,464,
#Deleted in new
chr10	80333770	80334426	chr10:80333770-80334426	3	+	80333770	80333770	8553170	2	88,251,	0,405,
#Partially deleted in new
chr10	80336107	80352727	chr10:80336107-80352727	1	-	80336155	80352601	789624	6	78,105,57,93,102,273,	0,2359,2989,6161,15793,16347,
#Partially deleted in new
chr10	80336128	80356753	chr10:80336128-80356753	1	-	80336155	80352601	789624	7	57,105,57,93,102,156,42,	0,2338,2968,6140,15772,16326,20583,
#Partially deleted in new
chr10	80338512	80356714	chr10:80338512-80356714	0	-	80338512	80352601	789624	6	59,57,93,102,156,362,	0,584,3756,13388,13942,17840,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	80344744	80368073	chr10:80344744-80368073	1	+	80344782	80366951	789624	4	71,156,123,1386,	0,17690,18206,21943,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	80344744	80368073	chr10:80344744-80368073	3	+	80362443	80366951	789624	6	71,181,337,156,123,1386,	0,7692,11515,17690,18206,21943,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	80344758	80368073	chr10:80344758-80368073	1	+	80362443	80366951	789624	5	57,300,156,123,1386,	0,11538,17676,18192,21929,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	80356296	80367281	chr10:80356296-80367281	1	+	80362443	80366951	789624	4	300,156,123,594,	0,6138,6654,10391,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	80356767	80368073	chr10:80356767-80368073	1	+	80362443	80366951	789624	4	58,156,123,1386,	0,5667,6183,9920,
#Partially deleted in new
chr10	80356772	80366794	chr10:80356772-80366794	0	+	80362443	80366794	789624	4	53,156,123,107,	0,5662,6178,9915,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	80356801	80368073	chr10:80356801-80368073	1	+	80362443	80366951	789624	5	24,153,156,123,1386,	0,1091,5633,6149,9886,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	80407828	80432108	chr10:80407828-80432108	1	+	80420467	80432099	789624	6	128,180,92,141,165,123,	0,12637,14588,18037,19503,24157,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	80408485	80432996	chr10:80408485-80432996	1	+	80420467	80432099	789624	6	158,646,92,141,165,1011,	0,11514,13931,17380,18846,23500,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	80408492	80437115	chr10:80408492-80437115	3	+	80420467	80432099	789624	6	151,180,92,141,165,5130,	0,11973,13924,17373,18839,23493,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	80408493	80432997	chr10:80408493-80432997	1	+	80420500	80432099	789624	6	150,163,92,141,165,1012,	0,11989,13923,17372,18838,23492,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	80413818	80432996	chr10:80413818-80432996	1	+	80420467	80432099	789624	6	58,180,92,141,165,1011,	0,6647,8598,12047,13513,18167,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	80419997	80432997	chr10:80419997-80432997	1	+	80420467	80432099	789624	5	648,92,141,165,1012,	0,2419,5868,7334,11988,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	80454165	80533123	chr10:80454165-80533123	3	+	80489233	80517976	789624	9	206,98,51,147,171,126,45,120,15219,	0,35051,50562,53062,55135,57978,59853,62038,63739,
#Partially deleted in new
chr10	80454264	80518216	chr10:80454264-80518216	1	+	80489233	80517976	789624	6	107,98,126,45,120,312,	0,34952,57879,59754,61939,63640,
#Partially deleted in new
chr10	80454321	80517922	chr10:80454321-80517922	0	+	80504765	80517922	789624	9	50,98,51,176,171,126,45,120,18,	0,34895,50406,52877,54979,57822,59697,61882,63583,
#Partially deleted in new
chr10	80454328	80509920	chr10:80454328-80509920	0	+	80454328	80454328	8553170	5	43,98,51,147,620,	0,34888,50399,52899,54972,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	80454329	80522631	chr10:80454329-80522631	1	+	80489233	80517976	789624	8	42,98,147,171,126,45,120,4727,	0,34887,52898,54971,57814,59689,61874,63575,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	80454352	80518041	chr10:80454352-80518041	1	+	80489233	80517976	789624	11	19,40,141,98,51,147,171,126,45,120,137,	0,8735,14194,34864,50375,52875,54948,57791,59666,61851,63552,
#Partially deleted in new
chr10	80454354	80518337	chr10:80454354-80518337	1	+	80489233	80517976	789624	8	17,98,51,147,126,45,120,433,	0,34862,50373,52873,57789,59664,61849,63550,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	80459301	80518041	chr10:80459301-80518041	1	+	80489233	80517976	789624	12	206,40,98,141,98,51,147,171,126,45,120,137,	0,3786,7139,9245,29915,45426,47926,49999,52842,54717,56902,58603,
#Partially deleted in new
chr10	80489211	80519628	chr10:80489211-80519628	1	+	80489233	80517976	789624	7	103,147,171,126,45,120,1724,	0,18016,20089,22932,24807,26992,28693,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	80515466	80519635	chr10:80515466-80519635	0	+	80515466	80515466	8553170	2	857,1731,	0,2438,
#Partially deleted in new
chr10	80529596	80535942	chr10:80529596-80535942	3	-	80529596	80529596	789624	2	235,363,	0,5983,
#Partially deleted in new
chr10	80537901	80646560	chr10:80537901-80646560	1	+	80538331	80644081	789624	7	614,163,148,148,217,125,2568,	0,32252,33529,50728,65677,71525,106091,
#Partially deleted in new
chr10	80538331	80644085	chr10:80538331-80644085	3	+	80538331	80644085	789624	8	184,163,148,148,217,128,221,93,	0,31822,33099,50298,65247,71092,95953,105661,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	80540818	80645962	chr10:80540818-80645962	1	+	80540896	80644081	789624	7	115,163,148,148,217,128,1970,	0,29335,30612,47811,62760,68605,103174,
#Partially deleted in new
chr10	80607298	80646558	chr10:80607298-80646558	0	+	80607298	80607298	8553170	3	202,128,2566,	0,2125,36694,
#Deleted in new
chr10	80642995	80646558	chr10:80642995-80646558	0	+	80642995	80642995	8553170	2	60,2566,	0,997,
#Partially deleted in new
chr10	80649796	80653732	chr10:80649796-80653732	3	+	80649796	80649796	789624	3	52,75,243,	0,2110,3693,
#Deleted in new
chr10	80716482	80717068	chr10:80716482-80717068	7	-	80716482	80716482	16724991	1	586,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	80749631	80751231	chr10:80749631-80751231	7	-	80749631	80749631	16724991	2	158,247,	0,1353,
#Partially deleted in new
chr10	80776164	80778088	chr10:80776164-80778088	7	-	80776164	80776164	16724991	2	870,908,	0,1016,
#Deleted in new
chr10	80940664	80941201	chr10:80940664-80941201	7	-	80940664	80940664	16724991	1	537,	0,
#Deleted in new
chr10	81136539	81137335	chr10:81136539-81137335	7	-	81136539	81136539	16724991	1	796,	0,
#Partially deleted in new
chr10	81875313	82985645	chr10:81875313-82985645	3	+	81875340	82985605	789624	9	850,130,74,27,103,127,128,171,548,	0,483425,863263,990097,1076155,1083635,1098474,1103636,1109784,
#Partially deleted in new
chr10	81875340	82985605	chr10:81875340-82985605	1	+	81875340	82985605	789624	10	823,130,74,27,103,127,128,171,72,508,	0,483398,863236,990070,1076128,1083608,1098447,1103609,1109442,1109757,
#Partially deleted in new
chr10	81877686	82986967	chr10:81877686-82986967	1	+	81877960	82985605	789624	11	334,100,130,74,27,103,127,128,171,72,1870,	0,289040,481052,860890,987724,1073782,1081262,1096101,1101263,1107096,1107411,
#Partially deleted in new
chr10	81877960	82985605	chr10:81877960-82985605	1	+	81877960	82985605	789624	10	135,100,130,74,27,103,127,128,171,508,	0,288766,480778,860616,987450,1073508,1080988,1095827,1100989,1107137,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	81877960	82985605	chr10:81877960-82985605	1	+	81877960	82985605	789624	11	135,100,78,130,74,27,103,127,128,171,508,	0,288766,354781,480778,860616,987450,1073508,1080988,1095827,1100989,1107137,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	82207619	82210345	chr10:82207619-82210345	3	-	82207619	82207619	8553170	2	1377,133,	0,2593,
#Deleted in new
chr10	82224212	82229179	chr10:82224212-82229179	3	-	82224212	82224212	8553170	3	147,127,253,	0,1186,4714,
#Partially deleted in new
chr10	82228984	82232577	chr10:82228984-82232577	0	-	82228984	82228984	8553170	3	27,155,98,	0,1226,3495,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	82230129	82232919	chr10:82230129-82232919	3	-	82230129	82230129	8553170	3	236,139,180,	0,2350,2610,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	82232249	82232920	chr10:82232249-82232920	0	-	82232249	82232249	8553170	2	369,181,	0,490,
#Partially deleted in new
chr10	82738575	82987179	chr10:82738575-82987179	1	+	82865433	82985605	789624	7	75,27,103,127,128,171,2082,	0,126835,212893,220373,235212,240374,246522,
#Partially deleted in new
chr10	82799741	82985605	chr10:82799741-82985605	1	+	82865433	82985605	789624	7	110,27,103,127,128,171,508,	0,65669,151727,159207,174046,179208,185356,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	83067961	83068071	chr10:83067961-83068071	3	-	83067961	83067961	8553170	1	110,	0,
#Partially deleted in new
chr10	83311627	83314475	chr10:83311627-83314475	7	-	83311627	83311627	16724991	2	88,2098,	0,750,
#Partially deleted in new
chr10	83672405	83675439	chr10:83672405-83675439	3	-	83672405	83672405	8553170	3	160,101,90,	0,733,2944,
#Deleted in new
chr10	83735505	83736493	chr10:83735505-83736493	7	+	83735505	83735505	16724991	1	988,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	83764357	83764464	chr10:83764357-83764464	3	+	83764357	83764357	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	83911653	83912922	chr10:83911653-83912922	3	-	83911653	83911653	8553170	2	138,171,	0,1098,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	84003331	84003479	chr10:84003331-84003479	3	+	84003331	84003331	8553170	1	148,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	84081428	84081995	chr10:84081428-84081995	7	+	84081428	84081428	16724991	2	169,99,	0,468,
#Duplicated in new
chr10	84138419	84140582	chr10:84138419-84140582	3	-	84138419	84138419	8553170	1	2163,	0,
#Partially deleted in new
chr10	84139439	84153245	chr10:84139439-84153245	3	+	84141500	84152348	789624	9	154,168,100,112,142,109,189,172,982,	0,2022,3215,4555,5435,9290,10615,11269,12824,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	84167227	84172093	chr10:84167227-84172093	3	-	84167227	84167227	789624	2	1502,372,	0,4494,
#Partially deleted in new
chr10	84173737	84185294	chr10:84173737-84185294	3	+	84173851	84184766	789624	3	184,90,614,	0,2742,10943,
#Partially deleted in new
chr10	84176517	84185284	chr10:84176517-84185284	0	+	84176517	84176517	8553170	2	52,434,	0,8333,
#Partially deleted in new
chr10	84194634	84218696	chr10:84194634-84218696	3	+	84194760	84214621	789624	17	181,96,146,51,90,87,114,144,79,101,204,153,165,68,229,258,4615,	0,859,1870,3151,4397,5966,7172,8345,9892,11192,13539,14094,16366,17013,17544,18456,19447,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr10	84194649	84219621	chr10:84194649-84219621	1	+	84194760	84219276	789624	17	166,96,146,51,90,87,114,144,79,101,204,153,165,68,229,258,543,	0,844,1855,3136,4382,5951,7157,8330,9877,11177,13524,14079,16351,16998,17529,18441,24429,
#Partially deleted in new
chr10	84201901	84217363	chr10:84201901-84217363	0	+	84201901	84214621	789624	10	19,144,79,101,204,153,68,229,258,3282,	0,1078,2625,3925,6272,6827,9746,10277,11189,12180,
#Partially deleted in new
chr10	84204552	84208862	chr10:84204552-84208862	0	+	84204552	84205823	789624	4	53,196,204,134,	0,1179,3621,4176,
#Partially deleted in new
chr10	84208828	84214123	chr10:84208828-84214123	0	+	84208828	84213097	789624	6	53,165,68,114,258,42,	0,2172,2819,3350,4262,5253,
#Deleted in new
chr10	84212876	84217366	chr10:84212876-84217366	0	+	84212876	84212876	8553170	2	472,3285,	0,1205,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	84213137	84219621	chr10:84213137-84219621	0	+	84213137	84219353	789624	3	211,14,278,	0,5941,6206,
#Deleted in new
chr10	84220494	84225589	chr10:84220494-84225589	1	-	84221919	84225520	789624	4	2186,30,782,179,	0,2333,3838,4916,
#Deleted in new
chr10	84220497	84225526	chr10:84220497-84225526	3	-	84221919	84225520	789624	3	2183,782,116,	0,3835,4913,
#Partially deleted in new
chr10	84231592	84241461	chr10:84231592-84241461	3	-	84231926	84241439	789624	4	1311,306,467,144,	0,2480,5627,9725,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	84245052	84259188	chr10:84245052-84259188	1	+	84245090	84258639	789624	6	117,157,122,154,118,681,	0,2538,3869,7804,9273,13455,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	84245052	84259960	chr10:84245052-84259960	3	+	84245090	84258639	789624	7	117,157,134,154,118,114,1453,	0,2538,3857,7804,9273,12840,13455,
#Partially deleted in new
chr10	84245052	84247954	chr10:84245052-84247954	0	+	84245052	84245052	8553170	2	117,364,	0,2538,
#Partially deleted in new
chr10	84245052	84258582	chr10:84245052-84258582	0	+	84245052	84245052	8553170	6	117,157,122,154,118,75,	0,2538,3869,7804,9273,13455,
#Partially deleted in new
chr10	84245062	84258582	chr10:84245062-84258582	0	+	84245062	84245062	8553170	6	107,122,154,118,114,75,	0,3859,7794,9263,12830,13445,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	84245085	84250927	chr10:84245085-84250927	1	+	84245090	84250427	789624	4	84,107,134,543,	0,2555,3824,5299,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	84245088	84259139	chr10:84245088-84259139	0	+	84245088	84245088	8553170	6	81,1403,154,118,114,632,	0,2552,7768,9237,12804,13419,
#Partially deleted in new
chr10	84247704	84254431	chr10:84247704-84254431	0	+	84247704	84247704	8553170	4	43,179,154,106,	0,1160,5152,6621,
#Partially deleted in new
chr10	84248950	84255440	chr10:84248950-84255440	0	+	84248950	84248950	8553170	4	93,154,118,304,	0,3906,5375,6186,
#Partially deleted in new
chr10	84255169	84258915	chr10:84255169-84258915	0	+	84255169	84255169	8553170	3	225,114,408,	0,2723,3338,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	84279979	84294659	chr10:84279979-84294659	3	+	84279979	84279979	789624	6	86,197,187,70,731,1414,	0,8244,8614,8995,11427,13266,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	84328557	84518492	chr10:84328557-84518492	1	+	84371052	84514267	789624	10	251,1456,197,91,163,196,84,87,90,5044,	0,42456,45061,89213,97173,109954,135375,141814,149017,184891,
#Partially deleted in new
chr10	84328585	84374005	chr10:84328585-84374005	1	+	84371052	84373905	789624	3	223,1456,387,	0,42428,45033,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	84328662	84518517	chr10:84328662-84518517	3	+	84371052	84513543	789624	11	146,1456,197,91,163,196,84,87,90,85,5069,	0,42351,44956,89108,97068,109849,135270,141709,148912,171212,184786,
#Deleted in new
chr10	84389169	84389626	chr10:84389169-84389626	7	-	84389169	84389169	16724991	1	457,	0,
#Deleted in new
chr10	84390907	84392045	chr10:84390907-84392045	7	+	84390907	84390907	16724991	1	1138,	0,
#Partially deleted in new
chr10	84393852	84514405	chr10:84393852-84514405	0	+	84393852	84393852	8553170	7	90,91,163,84,87,90,957,	0,23918,31878,70080,76519,83722,119596,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	84424938	84518521	chr10:84424938-84518521	1	+	84425744	84513543	789624	8	110,163,196,84,87,90,85,5073,	0,792,13573,38994,45433,52636,74936,88510,
#Partially deleted in new
chr10	84424946	84463945	chr10:84424946-84463945	0	+	84425744	84463945	789624	4	102,163,196,13,	0,784,13565,38986,
#Partially deleted in new
chr10	84425181	84513661	chr10:84425181-84513661	0	+	84425744	84513661	789624	7	45,163,196,84,87,90,213,	0,549,13330,38751,45190,52393,88267,
#Partially deleted in new
chr10	84438542	84513702	chr10:84438542-84513702	0	+	84438542	84438542	8553170	7	165,84,87,90,85,40,254,	0,25390,31829,39032,61332,68751,74906,
#Partially deleted in new
chr10	84452216	84513696	chr10:84452216-84513696	0	+	84452233	84473052	789624	6	89,84,87,115,90,248,	0,11716,18155,20815,25358,61232,
#Partially deleted in new
chr10	84452216	84513870	chr10:84452216-84513870	0	+	84452233	84513870	789624	5	89,84,87,90,422,	0,11716,18155,25358,61232,
#Partially deleted in new
chr10	84454678	84456056	chr10:84454678-84456056	7	-	84454678	84454678	16724991	3	166,43,475,	0,522,903,
#Deleted in new
chr10	84560442	84561263	chr10:84560442-84561263	7	+	84560442	84560442	16724991	1	821,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	85193420	85197958	chr10:85193420-85197958	3	-	85193420	85193420	789624	3	754,1080,195,	0,2433,4343,
#Deleted in new
chr10	85431942	85432515	chr10:85431942-85432515	3	-	85431942	85431942	8553170	2	290,113,	0,460,
#Partially deleted in new
chr10	85432862	85448961	chr10:85432862-85448961	3	+	85432862	85432862	789624	3	296,206,2170,	0,11862,13929,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	85449591	85491996	chr10:85449591-85491996	3	+	85449591	85449591	789624	6	585,321,200,102,107,172,	0,1809,3279,12004,28419,42233,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	85526879	85531115	chr10:85526879-85531115	3	-	85526879	85526879	8553170	1	4236,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	85537378	85537483	chr10:85537378-85537483	3	+	85537378	85537378	8553170	1	105,	0,
#Deleted in new
chr10	85555483	85557436	chr10:85555483-85557436	3	-	85555483	85555483	8553170	1	1953,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	85577730	85607213	chr10:85577730-85607213	3	+	85577730	85577730	789624	3	168,113,1819,	0,1760,27664,
#Partially deleted in new
chr10	85577752	85605804	chr10:85577752-85605804	0	+	85577752	85577752	8553170	2	146,410,	0,27642,
#Partially deleted in new
chr10	85577858	85606506	chr10:85577858-85606506	0	+	85577858	85577858	8553170	3	40,104,324,	0,27536,28324,
#Partially deleted in new
chr10	85599554	86366478	chr10:85599554-86366478	3	-	85602272	86366392	789624	16	3147,241,167,196,139,325,198,102,120,162,171,54,206,285,156,165,	0,13852,20312,47647,123448,124797,128300,129958,254941,256474,269455,316631,539264,606809,764386,766759,
#Partially deleted in new
chr10	85601992	85613133	chr10:85601992-85613133	0	-	85601992	85601992	8553170	2	709,78,	0,11063,
#Partially deleted in new
chr10	85601993	86366493	chr10:85601993-86366493	0	-	85613572	86366392	789624	15	708,241,196,139,325,198,102,120,162,171,54,206,285,156,180,	0,11413,45208,121009,122358,125861,127519,252502,254035,267016,314192,536825,604370,761947,764320,
#Deleted in new
chr10	85613016	85613186	chr10:85613016-85613186	3	-	85613016	85613016	8553170	1	170,	0,
#Partially deleted in new
chr10	85644072	85648066	chr10:85644072-85648066	3	+	85644072	85644072	8553170	2	116,2503,	0,1491,
#Deleted in new
chr10	85650011	85650260	chr10:85650011-85650260	3	-	85650011	85650011	8553170	1	249,	0,
#Deleted in new
chr10	85708759	85709167	chr10:85708759-85709167	7	+	85708759	85708759	16724991	1	408,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	86052447	86052566	chr10:86052447-86052566	7	+	86052447	86052447	16724991	1	119,	0,
#Deleted in new
chr10	86264693	86264788	chr10:86264693-86264788	3	-	86264693	86264693	5263520	1	95,	0,
#Partially deleted in new
chr10	86435255	86521815	chr10:86435255-86521815	3	-	86437542	86518069	0	19	2353,96,89,208,165,116,176,77,98,112,228,112,137,153,96,119,1026,521,451,	0,2664,8019,10986,16711,17964,18400,23733,25143,25920,32023,35736,36952,37356,38622,61945,64462,82315,86109,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	86435255	86444032	chr10:86435255-86444032	0	-	86435255	86435255	8553170	3	2353,96,758,	0,2664,8019,
#Partially deleted in new
chr10	86435256	86521768	chr10:86435256-86521768	1	-	86437542	86467449	789624	19	2352,96,89,208,116,176,77,98,112,228,112,137,153,96,119,1026,521,177,94,	0,2663,8018,10985,17963,18399,23732,25142,25919,32022,35735,36951,37355,38621,61944,64461,82314,86108,86418,
#Partially deleted in new
chr10	86435256	86521768	chr10:86435256-86521768	1	-	86437542	86518069	0	20	2352,96,89,208,165,116,176,77,98,112,228,112,137,153,96,119,1026,521,177,94,	0,2663,8018,10985,16710,17963,18399,23732,25142,25919,32022,35735,36951,37355,38621,61944,64461,82314,86108,86418,
#Partially deleted in new
chr10	86437009	86467506	chr10:86437009-86467506	0	-	86437542	86467506	789624	10	599,96,89,208,116,176,77,98,112,228,	0,910,6265,9232,16210,16646,21979,23389,24166,30269,
#Partially deleted in new
chr10	86467052	86472287	chr10:86467052-86472287	0	-	86467052	86467052	8553170	3	454,112,80,	0,3939,5155,
#Partially deleted in new
chr10	86488445	86488549	chr10:86488445-86488549	3	+	86488445	86488445	8553170	1	104,	0,
#Deleted in new
chr10	86521944	86525101	chr10:86521944-86525101	3	+	86521944	86521944	8553170	2	465,2593,	0,564,
#Deleted in new
chr10	86630824	86631628	chr10:86630824-86631628	7	-	86630824	86630824	16724991	1	804,	0,
#Partially deleted in new
chr10	86654556	86666455	chr10:86654556-86666455	1	+	86654783	86665751	789624	11	371,146,33,134,204,172,165,108,181,144,743,	0,1598,2638,3475,3927,4740,5338,6724,7695,9102,11156,
#Partially deleted in new
chr10	86654616	86666455	chr10:86654616-86666455	3	+	86654783	86665751	789624	10	311,146,134,204,172,165,108,181,144,743,	0,1538,3415,3867,4680,5278,6664,7635,9042,11096,
#Partially deleted in new
chr10	86654616	86666848	chr10:86654616-86666848	0	+	86654783	86666848	789624	11	311,146,33,134,204,172,165,108,181,144,55,	0,1538,2578,3415,3867,4680,5278,6664,7635,9042,12177,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	86668448	86736068	chr10:86668448-86736068	1	+	86668691	86732976	0	14	122,116,152,76,368,204,170,37,146,445,181,121,116,3182,	0,220,10918,11633,12987,18620,23447,24086,41456,47878,49515,50278,57688,64438,
#Partially deleted in new
chr10	86668506	86733001	chr10:86668506-86733001	1	+	86668691	86732976	0	14	69,114,152,76,368,204,170,37,146,445,181,121,116,115,	0,164,10860,11575,12929,18562,23389,24028,41398,47820,49457,50220,57630,64380,
#Partially deleted in new
chr10	86668612	86700041	chr10:86668612-86700041	1	+	86668691	86699374	0	8	172,152,76,23,204,170,37,764,	0,10754,11469,17065,18456,23283,23922,30665,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	86668670	86736068	chr10:86668670-86736068	1	+	86668691	86732976	0	13	114,152,76,368,170,37,189,146,445,181,121,116,3182,	0,10696,11411,12765,23225,23864,37860,41234,47656,49293,50056,57466,64216,
#Partially deleted in new
chr10	86668691	86734995	chr10:86668691-86734995	3	+	86668691	86732976	0	13	93,152,76,23,204,170,37,146,445,181,121,116,2109,	0,10675,11390,16986,18377,23204,23843,41213,47635,49272,50035,57445,64195,
#Partially deleted in new
chr10	86668691	86700045	chr10:86668691-86700045	1	+	86668691	86699374	0	8	93,152,76,368,204,170,37,768,	0,10675,11390,12744,18377,23204,23843,30586,
#Partially deleted in new
chr10	86668691	86700043	chr10:86668691-86700043	1	+	86668691	86685684	789624	9	93,152,76,368,23,204,170,37,766,	0,10675,11390,12744,16986,18377,23204,23843,30586,
#Partially deleted in new
chr10	86668691	86700045	chr10:86668691-86700045	1	+	86668691	86699374	0	7	93,152,76,368,170,37,768,	0,10675,11390,12744,23204,23843,30586,
#Partially deleted in new
chr10	86718729	86726451	chr10:86718729-86726451	0	+	86718729	86726264	789624	2	118,315,	0,7407,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	86749753	86756298	chr10:86749753-86756298	3	-	86749753	86749753	8553170	1	6545,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	86756600	86932825	chr10:86756600-86932825	0	+	86876018	86923719	0	14	319,115,219,163,103,97,100,145,193,298,176,131,1048,2525,	0,82264,119266,133461,135526,143193,143426,155639,160533,162571,164919,166775,166993,173700,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	86756649	86932838	chr10:86756649-86932838	3	+	86876018	86923719	0	13	270,115,219,163,103,97,100,145,193,298,176,131,9245,	0,82215,119217,133412,135477,143144,143377,155590,160484,162522,164870,166726,166944,
#Partially deleted in new
chr10	86838861	86929746	chr10:86838861-86929746	0	+	86876018	86923719	0	13	118,219,163,103,97,100,145,193,298,176,131,1048,447,	0,37005,51200,53265,60932,61165,73378,78272,80310,82658,84514,84732,90438,
#Partially deleted in new
chr10	86838861	86929738	chr10:86838861-86929738	0	+	86876018	86923719	0	13	118,219,163,103,97,100,145,193,298,176,131,1048,442,	0,37005,51200,53265,60932,61165,73378,78272,80310,82658,84514,84732,90435,
#Partially deleted in new
chr10	86838938	86890117	chr10:86838938-86890117	0	+	86876018	86890117	789624	4	41,105,219,56,	0,4467,36928,51123,
#Partially deleted in new
chr10	86854695	86856236	chr10:86854695-86856236	7	-	86854695	86854695	16724991	3	212,304,652,	0,517,889,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	86889568	86889733	chr10:86889568-86889733	3	+	86889568	86889568	8553170	1	165,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	86935539	86957863	chr10:86935539-86957863	3	-	86936742	86957541	789624	7	1586,1812,174,81,107,129,486,	0,6777,8722,9648,9830,10021,21838,
#Partially deleted in new
chr10	86943820	86954258	chr10:86943820-86954258	0	-	86943820	86954123	789624	6	308,174,81,107,129,221,	0,441,1367,1549,1740,10217,
#Deleted in new
chr10	86943870	86944571	chr10:86943870-86944571	0	-	86943870	86943870	8553170	2	258,96,	0,605,
#Partially deleted in new
chr10	86943871	86969312	chr10:86943871-86969312	0	-	86943871	86945469	789624	5	257,174,81,107,271,	0,390,1316,1498,25170,
#Partially deleted in new
chr10	86944363	86969481	chr10:86944363-86969481	0	-	86944363	86945670	789624	5	72,81,107,129,440,	0,824,1006,1197,24678,
#Partially deleted in new
chr10	86945221	86957571	chr10:86945221-86957571	0	-	86945645	86957541	789624	4	47,107,251,194,	0,148,339,12156,
#Partially deleted in new
chr10	86945480	86957585	chr10:86945480-86957585	0	-	86945480	86945480	8553170	2	331,208,	0,11897,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	86948676	86949875	chr10:86948676-86949875	3	+	86948676	86948676	8553170	1	1199,	0,
#Deleted in new
chr10	86958617	86962873	chr10:86958617-86962873	0	+	86958617	86958617	8553170	4	201,42,128,270,	0,1015,1383,3986,
#Deleted in new
chr10	86958629	86963165	chr10:86958629-86963165	1	+	86958697	86962641	789624	5	189,42,180,72,201,	0,1003,1319,3974,4335,
#Deleted in new
chr10	86958655	86963260	chr10:86958655-86963260	3	+	86958697	86962985	789624	5	163,42,128,72,296,	0,977,1345,3948,4309,
#Deleted in new
chr10	86959374	86963258	chr10:86959374-86963258	0	+	86959374	86959374	8553170	4	300,128,72,294,	0,626,3229,3590,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	86965344	86967549	chr10:86965344-86967549	0	-	86965344	86965344	8553170	1	2205,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	86965738	86969178	chr10:86965738-86969178	0	-	86965738	86965738	8553170	2	365,137,	0,3303,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	86965739	86971311	chr10:86965739-86971311	3	-	86965739	86965739	8553170	3	498,80,2049,	0,3302,3523,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	86965740	86971311	chr10:86965740-86971311	1	-	86965740	86965740	8553170	3	363,1606,1853,	0,2028,3718,
#Deleted in new
chr10	86968191	86970915	chr10:86968191-86970915	3	+	86968544	86970582	789624	3	414,63,440,	0,2008,2284,
#Deleted in new
chr10	86968431	86970530	chr10:86968431-86970530	0	+	86968544	86970530	789624	2	174,55,	0,2044,
#Partially deleted in new
chr10	86968489	86983934	chr10:86968489-86983934	0	+	86968544	86970582	789624	4	116,63,440,81,	0,1710,1986,15364,
#Deleted in new
chr10	86970236	86970826	chr10:86970236-86970826	3	-	86970236	86970236	8553170	2	371,94,	0,496,
#Partially deleted in new
chr10	86970740	87010126	chr10:86970740-87010126	3	+	86970740	86970740	8553170	12	175,101,88,223,191,80,143,116,101,36,52,1772,	0,12399,13113,21506,22621,24083,28708,29578,30895,33584,36914,37614,
#Partially deleted in new
chr10	86992252	87000435	chr10:86992252-87000435	7	+	86992252	86992252	16724991	6	217,191,80,184,143,117,	0,1109,2571,6125,7196,8066,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	86992405	87010203	chr10:86992405-87010203	3	+	86992405	86992405	8553170	7	64,191,80,2288,36,52,1849,	0,956,2418,7043,11919,15249,15949,
#Partially deleted in new
chr10	86993431	87024732	chr10:86993431-87024732	3	+	86993431	86993431	8553170	10	121,80,143,116,101,334,36,52,63,192,	0,1392,6017,6887,8204,9656,10893,14223,28882,31109,
#Partially deleted in new
chr10	87001635	87009905	chr10:87001635-87009905	7	+	87001635	87001635	16724991	4	101,36,52,1551,	0,2689,6019,6719,
#Partially deleted in new
chr10	87009784	87015782	chr10:87009784-87015782	3	-	87009784	87009784	8553170	2	147,87,	0,5911,
#Partially deleted in new
chr10	87020305	87024730	chr10:87020305-87024730	3	+	87020324	87024674	789624	3	92,63,190,	0,2008,4235,
#Partially deleted in new
chr10	87027183	87027477	chr10:87027183-87027477	7	+	87027183	87027183	16724991	1	294,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	87041237	87041341	chr10:87041237-87041341	3	-	87041237	87041237	8553170	1	104,	0,
#Partially deleted in new
chr10	87050485	87094866	chr10:87050485-87094866	3	-	87051750	87094769	0	13	1385,63,92,124,81,138,138,180,95,64,56,81,542,	0,2856,7205,8664,9675,10202,10429,12170,17577,24065,25482,26090,43839,
#Partially deleted in new
chr10	87057717	87060380	chr10:87057717-87060380	0	-	87057717	87057717	8553170	3	65,124,220,	0,1432,2443,
#Deleted in new
chr10	87060460	87061052	chr10:87060460-87061052	0	-	87060460	87060460	8553170	2	365,138,	0,454,
#Partially deleted in new
chr10	87060952	87067839	chr10:87060952-87067839	0	-	87060952	87060952	8553170	3	100,180,114,	0,1703,6773,
#Partially deleted in new
chr10	87094160	87151634	chr10:87094160-87151634	0	+	87151354	87151634	789624	3	628,56,285,	0,2773,57189,
#Partially deleted in new
chr10	87095195	87191463	chr10:87095195-87191463	3	+	87151354	87190683	789624	9	53,56,1530,108,195,135,229,116,980,	0,1738,56154,62852,75282,75644,84879,91889,95288,
#Partially deleted in new
chr10	87095195	87191468	chr10:87095195-87191468	1	+	87151354	87190683	789624	10	53,56,1530,108,195,135,207,229,116,985,	0,1738,56154,62852,75282,75644,80693,84879,91889,95288,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	87113953	87115523	chr10:87113953-87115523	3	+	87113953	87113953	8553170	2	493,195,	0,1375,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	87154040	87154369	chr10:87154040-87154369	3	-	87154040	87154040	8553170	1	329,	0,
#Partially deleted in new
chr10	87214135	87216173	chr10:87214135-87216173	7	-	87214135	87214135	16724991	2	143,180,	0,1858,
#Partially deleted in new
chr10	87225447	87234978	chr10:87225447-87234978	3	+	87225830	87234708	789624	7	765,700,129,140,383,117,1056,	0,2815,5472,6573,7155,8025,8475,
#Partially deleted in new
chr10	87225499	87236908	chr10:87225499-87236908	1	+	87225830	87235155	789624	7	713,700,129,140,383,117,1792,	0,2763,5420,6521,7103,7973,9617,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	87244131	87342612	chr10:87244131-87342612	3	-	87244131	87244131	8553170	6	1724,98,54,43,104,371,	0,1983,44310,82498,92654,98110,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	87286897	87308584	chr10:87286897-87308584	1	-	87286897	87286897	8553170	2	1598,628,	0,21059,
#Partially deleted in new
chr10	87287956	87342287	chr10:87287956-87342287	0	-	87287956	87287956	8553170	4	539,43,104,46,	0,38673,48829,54285,
#Partially deleted in new
chr10	87319855	87330952	chr10:87319855-87330952	0	-	87319855	87319855	8553170	3	344,43,61,	0,6774,11036,
#Partially deleted in new
chr10	87320552	87342330	chr10:87320552-87342330	1	-	87320552	87320552	8553170	5	191,74,43,104,89,	0,3539,6077,16233,21689,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	87325043	87342485	chr10:87325043-87342485	1	-	87325043	87325043	8553170	6	65,43,72,205,104,244,	0,1586,4728,5848,11742,17198,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	87334039	87336829	chr10:87334039-87336829	0	-	87334039	87334039	8553170	2	775,44,	0,2746,
#Partially deleted in new
chr10	87342735	87357882	chr10:87342735-87357882	3	+	87342735	87342735	8553170	5	670,59,278,335,1945,	0,1701,11884,12355,13202,
#Partially deleted in new
chr10	87342921	87357301	chr10:87342921-87357301	0	+	87342921	87342921	789624	5	216,59,278,335,1364,	0,1515,11698,12169,13016,
#Partially deleted in new
chr10	87357667	87367195	chr10:87357667-87367195	3	+	87358265	87366924	789624	7	764,700,129,140,383,117,1057,	0,2813,5470,6571,7153,8021,8471,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	87357719	87370695	chr10:87357719-87370695	1	+	87358265	87367372	789624	7	712,700,129,140,383,117,3362,	0,2761,5418,6519,7101,7969,9614,
#Deleted in new
chr10	87364988	87366491	chr10:87364988-87366491	0	+	87364988	87365931	789624	2	215,803,	0,700,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	87376895	87378481	chr10:87376895-87378481	7	+	87376895	87376895	16724991	1	1586,	0,
#Partially deleted in new
chr10	87386684	87390203	chr10:87386684-87390203	7	-	87386684	87386684	16724991	7	100,118,163,225,147,123,126,	0,614,1324,1967,2404,2651,3393,
#Partially deleted in new
chr10	87397022	87407700	chr10:87397022-87407700	3	-	87397022	87397022	789624	3	367,181,198,	0,997,10480,
#Partially deleted in new
chr10	87397061	87424792	chr10:87397061-87424792	0	-	87397061	87397061	8553170	3	328,154,29,	0,985,27702,
#Deleted in new
chr10	87408043	87408258	chr10:87408043-87408258	7	-	87408043	87408043	16724991	1	215,	0,
#Deleted in new
chr10	87503880	87503954	chr10:87503880-87503954	3	+	87503880	87503880	5263520	1	74,	0,
#Partially deleted in new
chr10	87504874	87553388	chr10:87504874-87553388	1	+	87504915	87552185	789624	3	678,198,1307,	0,3461,47207,
#Partially deleted in new
chr10	87504874	87553388	chr10:87504874-87553388	3	+	87504915	87552478	789624	5	678,198,98,134,1307,	0,3461,8249,16161,47207,
#Partially deleted in new
chr10	87507832	87553460	chr10:87507832-87553460	1	+	87508204	87552478	789624	5	406,198,98,134,1379,	0,503,5291,13203,44249,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	87521114	87552637	chr10:87521114-87552637	0	+	87521114	87521114	8553170	3	55,123,556,	0,25458,30967,
#Partially deleted in new
chr10	87591606	87606024	chr10:87591606-87606024	3	-	87591606	87591606	8553170	2	137,31,	0,14387,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	87610162	87660003	chr10:87610162-87660003	3	-	87610162	87610162	8553170	4	312,124,162,146,	0,1793,12156,49695,
#Deleted in new
chr10	87642606	87642954	chr10:87642606-87642954	7	+	87642606	87642606	16724991	1	348,	0,
#Partially deleted in new
chr10	87659612	87747705	chr10:87659612-87747705	3	+	87659981	87745970	0	12	396,118,236,139,119,114,112,206,136,269,230,1874,	0,49583,53462,54431,55132,55372,56119,67671,81622,83760,85389,86219,
#Partially deleted in new
chr10	87659718	87747703	chr10:87659718-87747703	1	+	87659981	87745970	0	13	290,118,236,139,119,114,112,15,206,136,269,230,1872,	0,49477,53356,54325,55026,55266,56013,62037,67565,81516,83654,85283,86113,
#Partially deleted in new
chr10	87660356	87713182	chr10:87660356-87713182	0	+	87660356	87660356	8553170	3	49,118,108,	0,48839,52718,
#Partially deleted in new
chr10	87660983	87713310	chr10:87660983-87713310	0	+	87660983	87660983	8553170	3	70,118,236,	0,48212,52091,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	87751511	87818160	chr10:87751511-87818160	3	-	87754686	87814599	789624	10	3296,134,51,90,107,201,121,99,175,366,	0,5277,16161,19440,24809,32958,38798,41145,62926,66283,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	87753116	87814882	chr10:87753116-87814882	1	-	87754686	87814599	789624	9	1691,134,51,90,107,201,121,99,445,	0,3672,14556,17835,23204,31353,37193,39540,61321,
#Partially deleted in new
chr10	87784551	87841343	chr10:87784551-87841343	0	-	87784551	87784551	8553170	5	119,121,99,175,157,	0,5758,8105,29886,56635,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	87817927	87819263	chr10:87817927-87819263	5	+	87817927	87817927	16724991	2	62,362,	0,974,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	87818312	87845612	chr10:87818312-87845612	7	+	87818312	87818312	16724991	4	24,139,154,1803,	0,589,13786,25497,
#Deleted in new
chr10	87818424	87819081	chr10:87818424-87819081	4	+	87818424	87818424	16724991	2	290,180,	0,477,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	87832817	87833098	chr10:87832817-87833098	3	-	87832817	87832817	8553170	1	281,	0,
#Deleted in new
chr10	87843869	87844280	chr10:87843869-87844280	5	+	87843869	87843869	16724991	1	411,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	87859160	87863437	chr10:87859160-87863437	3	-	87861950	87862487	789624	1	4277,	0,
#Partially deleted in new
chr10	87863112	87971930	chr10:87863112-87971930	3	+	87864469	87965472	0	9	1436,85,45,44,239,142,167,225,6644,	0,30912,62400,67933,69900,89005,94740,97781,102174,
#Deleted in new
chr10	87864448	87867049	chr10:87864448-87867049	0	+	87864448	87864448	8553170	2	100,377,	0,2224,
#Partially deleted in new
chr10	87864467	87894326	chr10:87864467-87894326	0	+	87864467	87864467	8553170	2	81,302,	0,29557,
#Deleted in new
chr10	87864500	87866081	chr10:87864500-87866081	0	+	87864500	87864500	8553170	1	1581,	0,
#Partially deleted in new
chr10	87878691	87880427	chr10:87878691-87880427	3	+	87878691	87878691	8553170	3	332,39,128,	0,1380,1608,
#Partially deleted in new
chr10	87925522	87933487	chr10:87925522-87933487	0	+	87925522	87925522	8553170	3	35,44,475,	0,5523,7490,
#Deleted in new
chr10	87945501	87946024	chr10:87945501-87946024	7	+	87945501	87945501	16724991	1	523,	0,
#Partially deleted in new
chr10	87952198	87961309	chr10:87952198-87961309	0	+	87952198	87961127	789624	3	61,167,416,	0,5654,8695,
#Deleted in new
chr10	87994617	87994695	chr10:87994617-87994695	3	-	87994617	87994617	8553170	1	78,	0,
#Partially deleted in new
chr10	88048134	88049823	chr10:88048134-88049823	7	-	88048134	88048134	16724991	2	547,166,	0,1523,
#Deleted in new
chr10	88259128	88259372	chr10:88259128-88259372	7	-	88259128	88259128	16724991	1	244,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	88273863	88584530	chr10:88273863-88584530	1	-	88274960	88583190	0	7	1169,176,174,159,143,106,1458,	0,40602,88688,299039,307703,308338,309209,
#Partially deleted in new
chr10	88284958	88583213	chr10:88284958-88583213	3	-	88285353	88583190	0	7	548,176,174,159,143,106,141,	0,29507,77593,287944,296608,297243,298114,
#Partially deleted in new
chr10	88314512	88583332	chr10:88314512-88583332	0	-	88314512	88314512	8553170	5	129,174,143,106,260,	0,48039,267054,267689,268560,
#Partially deleted in new
chr10	88362551	88583330	chr10:88362551-88583330	0	-	88362551	88362551	8553170	3	174,159,258,	0,210351,220521,
#Partially deleted in new
chr10	88572903	88583190	chr10:88572903-88583190	1	-	88572903	88583190	789624	4	158,143,106,118,	0,8663,9298,10169,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	88585637	88585733	chr10:88585637-88585733	3	-	88585637	88585637	8553170	1	96,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	88586752	88594312	chr10:88586752-88594312	0	+	88586752	88586752	8553170	2	640,2935,	0,4625,
#Partially deleted in new
chr10	88586761	88606976	chr10:88586761-88606976	3	+	88590687	88606907	789624	11	84,127,112,121,199,110,137,147,72,72,303,	0,504,3823,4616,7184,7905,9518,10028,15814,18871,19912,
#Partially deleted in new
chr10	88594745	88606823	chr10:88594745-88606823	0	+	88594745	88606823	789624	5	31,137,72,72,150,	0,1534,7830,10887,11928,
#Deleted in new
chr10	88618222	88618934	chr10:88618222-88618934	7	-	88618222	88618222	16724991	1	712,	0,
#Partially deleted in new
chr10	88664440	88678811	chr10:88664440-88678811	1	+	88665540	88678681	0	11	51,81,116,118,199,110,137,147,72,72,367,	0,1038,2846,3128,4117,5396,7388,9147,11145,11768,14004,
#Partially deleted in new
chr10	88664440	88678811	chr10:88664440-88678811	1	+	88667297	88678681	0	10	51,116,118,100,110,137,147,72,72,367,	0,2846,3128,4216,5396,7388,9147,11145,11768,14004,
#Partially deleted in new
chr10	88664441	88669538	chr10:88664441-88669538	0	+	88664441	88664441	8553170	4	50,116,118,981,	0,2845,3127,4116,
#Partially deleted in new
chr10	88664456	88678814	chr10:88664456-88678814	3	+	88667297	88678681	0	10	35,116,118,199,110,137,147,72,72,370,	0,2830,3112,4101,5380,7372,9131,11129,11752,13988,
#Partially deleted in new
chr10	88664457	88678814	chr10:88664457-88678814	1	+	88665540	88678681	0	11	34,81,116,118,100,110,137,147,72,72,370,	0,1021,2829,3111,4199,5379,7371,9130,11128,11751,13987,
#Partially deleted in new
chr10	88675492	88678514	chr10:88675492-88678514	0	+	88675492	88675492	8553170	3	165,72,70,	0,716,2952,
#Deleted in new
chr10	88699682	88700401	chr10:88699682-88700401	7	+	88699682	88699682	16724991	1	719,	0,
#Partially deleted in new
chr10	88724543	88752786	chr10:88724543-88752786	3	+	88724543	88752756	789624	9	105,118,199,110,137,147,72,72,270,	0,2251,6439,7634,7871,13091,15452,18706,27973,
#Deleted in new
chr10	88727484	88728914	chr10:88727484-88728914	7	+	88727484	88727484	16724991	1	1430,	0,
#Partially deleted in new
chr10	88761405	88778242	chr10:88761405-88778242	3	+	88761405	88778242	789624	9	108,118,199,110,137,147,72,72,234,	0,782,3004,4863,7386,9439,13067,13686,16603,
#Deleted in new
chr10	88785599	88787061	chr10:88785599-88787061	7	-	88785599	88785599	16724991	1	1462,	0,
#Partially deleted in new
chr10	88802729	88820501	chr10:88802729-88820501	3	+	88802896	88820501	789624	9	314,118,199,110,137,147,72,72,270,	0,5568,10367,11800,12358,12627,14086,15095,17502,
#Partially deleted in new
chr10	88805978	88820546	chr10:88805978-88820546	1	+	88805978	88820501	789624	9	27,118,199,110,137,147,72,72,315,	0,2319,7118,8551,9109,9378,10837,11846,14253,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	88822131	88851818	chr10:88822131-88851818	3	-	88822940	88851607	789624	6	887,99,78,108,192,232,	0,1148,3906,6427,9703,29455,
#Deleted in new
chr10	88822800	88823515	chr10:88822800-88823515	0	-	88822800	88822800	8553170	2	218,236,	0,479,
#Deleted in new
chr10	88876449	88877544	chr10:88876449-88877544	7	+	88876449	88876449	16724991	1	1095,	0,
#Partially deleted in new
chr10	88879733	88923487	chr10:88879733-88923487	3	+	88901708	88923224	0	11	905,83,218,76,96,358,125,138,113,100,320,	0,21922,25709,28968,31182,33367,34800,36946,41549,42603,43434,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	88879733	88975153	chr10:88879733-88975153	1	+	88901708	88973313	0	11	905,83,218,76,96,358,125,138,113,100,1972,	0,21922,25709,28968,31182,33367,34800,36946,41549,42603,93448,
#Partially deleted in new
chr10	88880223	88893913	chr10:88880223-88893913	0	+	88880223	88880223	8553170	3	415,161,43,	0,2238,13647,
#Deleted in new
chr10	88882082	88882857	chr10:88882082-88882857	0	+	88882082	88882082	8553170	2	54,396,	0,379,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	88901074	88923487	chr10:88901074-88923487	1	+	88901708	88923224	0	10	664,218,76,96,358,125,138,113,100,320,	0,4368,7627,9841,12026,13459,15605,20208,21262,22093,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	88912355	88923487	chr10:88912355-88923487	1	+	88913178	88923224	789624	6	1103,125,138,113,100,320,	0,2178,4324,8927,9981,10812,
#Partially deleted in new
chr10	88932389	88933838	chr10:88932389-88933838	0	+	88932389	88932389	8553170	2	570,192,	0,1257,
#Partially deleted in new
chr10	88932642	88940340	chr10:88932642-88940340	3	+	88932642	88932642	789624	5	317,246,676,265,946,	0,998,2255,5569,6752,
#Partially deleted in new
chr10	88935073	88952773	chr10:88935073-88952773	3	-	88935222	88948930	789624	9	293,182,192,162,85,111,129,152,43,	0,2987,4433,6155,6711,8723,12184,13728,17657,
#Deleted in new
chr10	88939474	88940611	chr10:88939474-88940611	0	+	88939474	88939474	8553170	2	334,525,	0,612,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	88939496	88940820	chr10:88939496-88940820	0	+	88939496	88939496	8553170	2	66,609,	0,715,
#Partially deleted in new
chr10	88941000	88952747	chr10:88941000-88952747	0	-	88941000	88941000	8553170	6	390,85,111,129,152,17,	0,784,2796,6257,7801,11730,
#Partially deleted in new
chr10	88941784	88991339	chr10:88941784-88991339	0	-	88941784	88948930	789624	5	85,111,129,152,401,	0,2012,5473,7017,49154,
#Partially deleted in new
chr10	88941784	88991288	chr10:88941784-88991288	0	-	88941784	88948930	789624	5	85,111,129,152,267,	0,2012,5473,7017,49237,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	88946819	88952773	chr10:88946819-88952773	0	-	88946819	88946819	8553170	3	567,152,43,	0,1982,5911,
#Partially deleted in new
chr10	88948241	88952773	chr10:88948241-88952773	0	-	88948241	88948241	8553170	2	712,43,	0,4489,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	88990581	89014474	chr10:88990581-89014474	0	+	88990876	89012282	789624	10	325,166,138,109,62,63,83,137,25,356,	0,12447,17118,18307,19957,20171,21417,21617,22761,23537,
#Partially deleted in new
chr10	88990656	89015785	chr10:88990656-89015785	3	+	88990876	89014450	0	9	250,166,138,109,62,63,83,25,1667,	0,12372,17043,18232,19882,20096,21342,22686,23462,
#Partially deleted in new
chr10	88990686	89014955	chr10:88990686-89014955	1	+	88990876	89014125	789624	9	220,166,138,109,62,63,83,25,856,	0,12342,17013,18202,19852,20066,21312,22656,23413,
#Partially deleted in new
chr10	88990730	89014619	chr10:88990730-89014619	0	+	88990876	89010806	0	7	176,166,62,63,83,25,501,	0,12298,19808,20022,21268,22612,23388,
#Partially deleted in new
chr10	88990777	89014450	chr10:88990777-89014450	1	+	88990876	89014450	0	8	129,166,138,109,62,83,25,332,	0,12251,16922,18111,19761,21221,22565,23341,
#Partially deleted in new
chr10	88990851	89014584	chr10:88990851-89014584	0	+	88990876	89012001	0	6	55,166,62,83,25,466,	0,12177,19687,21147,22491,23267,
#Partially deleted in new
chr10	88990851	89014450	chr10:88990851-89014450	0	+	88990876	89010806	0	8	55,166,138,62,63,83,25,332,	0,12177,16848,19687,19901,21147,22491,23267,
#Partially deleted in new
chr10	88990851	89014584	chr10:88990851-89014584	0	+	88990876	89010806	0	7	55,166,138,62,63,25,466,	0,12177,16848,19687,19901,22491,23267,
#Partially deleted in new
chr10	88990876	89014450	chr10:88990876-89014450	1	+	88990876	89014130	0	8	30,166,138,109,62,63,83,332,	0,12152,16823,18012,19662,19876,21122,23242,
#Partially deleted in new
chr10	88990876	89014450	chr10:88990876-89014450	0	+	88990876	89012001	0	7	30,166,138,62,83,25,332,	0,12152,16823,19662,21122,22466,23242,
#Partially deleted in new
chr10	88990959	89008997	chr10:88990959-89008997	0	+	88990959	88990959	8553170	4	397,166,138,109,	0,12069,16740,17929,
#Partially deleted in new
chr10	88991019	89010815	chr10:88991019-89010815	0	+	88991019	88991019	8553170	6	193,166,138,109,62,63,	0,12009,16680,17869,19519,19733,
#Partially deleted in new
chr10	88991287	89014177	chr10:88991287-89014177	0	+	88991287	88991287	789624	9	339,166,138,109,62,63,83,25,59,	0,11741,16412,17601,19251,19465,20711,22055,22831,
#Partially deleted in new
chr10	88991427	89010660	chr10:88991427-89010660	0	+	88991427	88991427	8553170	4	199,166,138,122,	0,11601,16272,19111,
#Partially deleted in new
chr10	88991430	89010952	chr10:88991430-89010952	0	+	88991430	88991430	8553170	5	196,166,138,109,414,	0,11598,16269,17458,19108,
#Partially deleted in new
chr10	88991442	89014216	chr10:88991442-89014216	0	+	88991442	88991442	789624	7	184,166,62,63,83,25,98,	0,11586,19096,19310,20556,21900,22676,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	88991447	89012222	chr10:88991447-89012222	0	+	88991447	88991447	8553170	8	179,166,138,109,62,63,83,24,	0,11581,16252,17441,19091,19305,20551,20751,
#Deleted in new
chr10	88992369	88992539	chr10:88992369-88992539	3	+	88992369	88992369	8553170	1	170,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	89002579	89015542	chr10:89002579-89015542	0	+	89002579	89002579	8553170	9	151,166,138,109,62,63,83,25,1424,	0,449,5120,6309,7959,8173,9419,10763,11539,
#Partially deleted in new
chr10	89002753	89015532	chr10:89002753-89015532	0	+	89002753	89002753	8553170	9	202,166,138,109,62,63,83,25,1414,	0,275,4946,6135,7785,7999,9245,10589,11365,
#Deleted in new
chr10	89012681	89015541	chr10:89012681-89015541	0	+	89012681	89012681	8553170	3	150,25,1423,	0,661,1437,
#Deleted in new
chr10	89015835	89017059	chr10:89015835-89017059	3	+	89015835	89015835	8553170	1	1224,	0,
#Deleted in new
chr10	89063334	89063411	chr10:89063334-89063411	3	-	89063334	89063334	5263520	1	77,	0,
#Deleted in new
chr10	89063335	89063410	chr10:89063335-89063410	3	+	89063335	89063335	5263520	1	75,	0,
#Deleted in new
chr10	89139043	89139458	chr10:89139043-89139458	7	+	89139043	89139043	16724991	1	415,	0,
#Deleted in new
chr10	89205628	89207314	chr10:89205628-89207314	3	-	89206473	89207292	789624	1	1686,	0,
#Partially deleted in new
chr10	89213568	89252058	chr10:89213568-89252058	3	-	89214827	89247648	789624	10	1493,72,72,147,137,110,199,118,112,322,	0,2369,8942,10115,11523,13326,14631,32107,33969,38168,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	89213568	89414557	chr10:89213568-89414557	1	-	89214827	89412851	789624	9	1493,72,72,147,137,110,199,132,151,	0,2369,8942,10115,11523,13326,14631,199222,200838,
#Partially deleted in new
chr10	89213574	89252039	chr10:89213574-89252039	1	-	89214827	89228279	789624	8	1487,72,72,147,137,110,199,303,	0,2363,8936,10109,11517,13320,14625,38162,
#Partially deleted in new
chr10	89222532	89247831	chr10:89222532-89247831	0	-	89222532	89247648	789624	7	50,147,137,110,199,118,294,	0,1151,2559,4362,5667,23143,25005,
#Partially deleted in new
chr10	89225108	89342704	chr10:89225108-89342704	0	-	89225108	89247648	789624	6	120,110,199,118,112,94,	0,1786,3091,20567,22429,117502,
#Partially deleted in new
chr10	89283798	89292125	chr10:89283798-89292125	0	+	89283798	89283798	8553170	2	93,139,	0,8188,
#Deleted in new
chr10	89283805	89284554	chr10:89283805-89284554	1	+	89283805	89283805	8553170	2	86,517,	0,232,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	89291990	89342610	chr10:89291990-89342610	0	-	89291990	89291990	8553170	3	363,97,50,	0,1581,50570,
#Partially deleted in new
chr10	89301954	89309276	chr10:89301954-89309276	1	+	89302123	89307375	0	2	174,3315,	0,4007,
#Partially deleted in new
chr10	89302045	89308919	chr10:89302045-89308919	1	+	89302123	89307411	789624	3	83,1411,1544,	0,3916,5330,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	89327893	89340971	chr10:89327893-89340971	3	+	89328073	89340128	0	2	185,2311,	0,10767,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	89332483	89340971	chr10:89332483-89340971	1	+	89332622	89340128	0	2	144,2311,	0,6177,
#Deleted in new
chr10	89362293	89363487	chr10:89362293-89363487	7	+	89362293	89362293	16724991	1	1194,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	89378055	89385205	chr10:89378055-89385205	3	+	89378135	89384738	789624	2	85,1887,	0,5263,
#Partially deleted in new
chr10	89392545	89403988	chr10:89392545-89403988	3	+	89392712	89403712	0	2	172,1708,	0,9735,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	89392545	89406486	chr10:89392545-89406486	1	+	89402368	89403712	0	3	172,235,4206,	0,561,9735,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	89414585	89421001	chr10:89414585-89421001	3	+	89414798	89418648	0	2	218,3797,	0,2619,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	89430298	89535556	chr10:89430298-89535556	3	-	89433063	89462578	789624	8	3028,260,580,144,104,246,140,115,	0,5761,8305,10809,13457,32080,104202,105143,
#Partially deleted in new
chr10	89456063	89468140	chr10:89456063-89468140	3	+	89456063	89456063	789624	3	185,178,115,	0,6451,11962,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	89462502	89556641	chr10:89462502-89556641	0	-	89462502	89462578	789624	3	122,100,118,	0,93379,94021,
#Partially deleted in new
chr10	89462614	89468140	chr10:89462614-89468140	1	+	89462614	89462614	8553170	3	78,212,115,	0,252,5411,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	89579496	89645572	chr10:89579496-89645572	1	-	89584405	89645302	0	7	4969,126,124,177,254,353,973,	0,9155,13700,14316,19755,32199,65103,
#Partially deleted in new
chr10	89582987	89643874	chr10:89582987-89643874	1	-	89584405	89643724	0	6	1478,126,124,254,353,178,	0,5664,10209,16264,28708,60709,
#Partially deleted in new
chr10	89582987	89643887	chr10:89582987-89643887	3	-	89584405	89643724	0	7	1478,126,124,177,254,353,191,	0,5664,10209,10825,16264,28708,60709,
#Partially deleted in new
chr10	89592746	89592827	chr10:89592746-89592827	3	-	89592746	89592746	5263520	1	81,	0,
#Partially deleted in new
chr10	89599161	89611908	chr10:89599161-89611908	0	-	89599161	89599161	8553170	2	344,213,	0,12534,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	89625694	89643956	chr10:89625694-89643956	0	-	89625694	89625694	8553170	4	159,57,96,260,	0,498,842,18002,
#Deleted in new
chr10	89644602	89645223	chr10:89644602-89645223	7	-	89644602	89644602	16724991	1	621,	0,
#Partially deleted in new
chr10	89645281	89650667	chr10:89645281-89650667	3	+	89645281	89645281	8553170	4	176,99,173,115,	0,3641,4777,5271,
#Partially deleted in new
chr10	89645441	89650667	chr10:89645441-89650667	0	+	89645441	89645441	8553170	4	58,99,173,115,	0,3481,4617,5111,
#Partially deleted in new
chr10	89646288	89650822	chr10:89646288-89650822	3	-	89646288	89646288	8553170	2	258,110,	0,4424,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	89667180	89699671	chr10:89667180-89699671	3	-	89667180	89667180	8553170	3	1071,79,148,	0,25348,32343,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	89694294	89697928	chr10:89694294-89697928	3	-	89694294	89694294	8553170	2	508,159,	0,3475,
#Partially deleted in new
chr10	89701609	89774939	chr10:89701609-89774939	3	+	89705294	89774048	789624	33	71,148,87,117,139,185,37,228,112,72,147,163,288,140,139,109,41,120,154,1231,139,120,61,126,125,156,177,111,198,102,151,143,969,	0,3684,7557,7735,8317,9351,12437,13345,14826,15814,15966,17100,17809,22354,23410,24803,26246,27518,31293,35777,37348,42198,44289,49736,50957,52908,57096,58916,61028,66680,67128,71079,72361,
#Partially deleted in new
chr10	89701616	89774939	chr10:89701616-89774939	1	+	89705294	89774048	789624	33	64,148,87,117,139,185,37,228,112,72,147,163,288,140,139,229,41,120,154,1231,139,120,61,126,125,156,177,111,198,102,151,143,969,	0,3677,7550,7728,8310,9344,12430,13338,14819,15807,15959,17093,17802,22347,23403,24676,26239,27511,31286,35770,37341,42191,44282,49729,50950,52901,57089,58909,61021,66673,67121,71072,72354,
#Partially deleted in new
chr10	89701678	89711090	chr10:89701678-89711090	0	+	89705294	89711090	789624	6	39,148,87,117,139,130,	0,3615,7488,7666,8248,9282,
#Partially deleted in new
chr10	89723575	89774939	chr10:89723575-89774939	0	+	89723575	89723575	8553170	20	528,139,109,41,120,154,1231,139,120,61,126,125,156,177,111,198,102,151,143,969,	0,1444,2837,4280,5552,9327,13811,15382,20232,22323,27770,28991,30942,35130,36950,39062,44714,45162,49113,50395,
#Deleted in new
chr10	89786609	89787107	chr10:89786609-89787107	7	+	89786609	89786609	16724991	1	498,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	89829509	89840861	chr10:89829509-89840861	3	+	89829509	89829509	789624	4	236,335,57,3644,	0,460,5691,7708,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	89829555	89840861	chr10:89829555-89840861	0	+	89829555	89829555	8553170	3	190,57,3644,	0,5645,7662,
#Deleted in new
chr10	89837611	89839334	chr10:89837611-89839334	7	-	89837611	89837611	16724991	1	1723,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	89853905	89914948	chr10:89853905-89914948	3	+	89853905	89853905	789624	2	102,313,	0,60730,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	89915488	89957373	chr10:89915488-89957373	3	-	89915488	89915488	789624	4	1283,129,223,225,	0,40386,40726,41660,
#Deleted in new
chr10	89978716	89979070	chr10:89978716-89979070	7	+	89978716	89978716	16724991	1	354,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	90163650	90163960	chr10:90163650-90163960	3	-	90163650	90163650	8553170	1	310,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	90402520	90540805	chr10:90402520-90540805	3	-	90402520	90402520	789624	7	288,86,67,146,154,166,74,	0,433,1467,3929,49159,124753,138211,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	90454169	90501440	chr10:90454169-90501440	1	+	90454169	90454169	8553170	3	146,54,2168,	0,31849,45103,
#Partially deleted in new
chr10	90454679	90461501	chr10:90454679-90461501	1	+	90454679	90454679	8553170	2	144,730,	0,6092,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	90454697	90502968	chr10:90454697-90502968	3	+	90454697	90454697	8553170	4	126,54,99,183,	0,31321,44575,48088,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	90462716	90467952	chr10:90462716-90467952	3	+	90462716	90462716	8553170	3	670,73,88,	0,3199,5148,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	90622142	90623611	chr10:90622142-90623611	3	-	90622142	90622142	8553170	1	1469,	0,
#Partially deleted in new
chr10	90740822	90857698	chr10:90740822-90857698	3	-	90742485	90857671	789624	3	1706,756,566,	0,8016,116310,
#Partially deleted in new
chr10	90740822	90857698	chr10:90740822-90857698	1	-	90742481	90857671	789624	4	1706,98,756,566,	0,2770,8016,116310,
#Partially deleted in new
chr10	90740822	90857698	chr10:90740822-90857698	1	-	90748834	90857671	789624	3	1706,761,566,	0,8011,116310,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	90871715	90902190	chr10:90871715-90902190	3	+	90871986	90900679	789624	11	353,56,57,75,72,90,117,30,38,80,1621,	0,3153,3842,4308,7347,14096,23059,23738,24164,24597,28854,
#Partially deleted in new
chr10	90871972	90900762	chr10:90871972-90900762	0	+	90871972	90871972	8553170	10	96,56,57,75,72,90,709,38,80,193,	0,2896,3585,4051,7090,13839,22802,23907,24340,28597,
#Partially deleted in new
chr10	90871982	90896392	chr10:90871982-90896392	0	+	90871986	90896392	789624	10	152,56,57,75,72,90,117,30,38,80,	0,2886,3575,4041,7080,13829,22792,23471,23897,24330,
#Partially deleted in new
chr10	90875557	90900766	chr10:90875557-90900766	0	+	90875557	90900679	789624	8	57,75,72,90,117,38,80,197,	0,466,3505,10254,19217,20322,20755,25012,
#Partially deleted in new
chr10	90875603	90900847	chr10:90875603-90900847	0	+	90875603	90875603	8553170	6	11,75,72,90,117,278,	0,420,3459,10208,19171,24966,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	90880039	90880179	chr10:90880039-90880179	3	-	90880039	90880039	8553170	1	140,	0,
#Partially deleted in new
chr10	90894772	90905638	chr10:90894772-90905638	0	+	90894772	90894772	8553170	6	119,30,38,80,97,337,	0,681,1107,1540,5797,10529,
#Partially deleted in new
chr10	90895667	90900766	chr10:90895667-90900766	0	+	90895667	90895667	8553170	3	250,80,197,	0,645,4902,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	90896325	90908553	chr10:90896325-90908553	0	+	90896325	90896325	8553170	5	67,99,102,85,271,	0,4244,5917,6866,11957,
#Deleted in new
chr10	90912095	90921276	chr10:90912095-90921276	3	-	90912865	90921027	789624	9	881,99,99,99,99,108,138,180,276,	0,3447,3686,4075,5636,6769,7035,8073,8905,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	90922730	90922835	chr10:90922730-90922835	3	-	90922730	90922730	8553170	1	105,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	90994619	91006390	chr10:90994619-91006390	3	+	90994619	90994619	8553170	2	134,246,	0,11525,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	90997479	90997713	chr10:90997479-90997713	3	-	90997479	90997479	8553170	1	234,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	91033156	91062164	chr10:91033156-91062164	3	+	91033156	91033156	8553170	8	38,56,75,33,194,289,129,186,	0,6196,7646,11665,12580,13855,14744,28822,
#Deleted in new
chr10	91053050	91055047	chr10:91053050-91055047	7	+	91053050	91053050	16724991	1	1997,	0,
#Deleted in new
chr10	91152604	91153349	chr10:91152604-91153349	7	-	91152604	91152604	16724991	1	745,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	91163011	91284329	chr10:91163011-91284329	3	+	91222871	91278316	0	10	70,295,97,56,60,149,99,90,60,6061,	0,59677,77472,85493,85653,88280,98314,101419,108626,115257,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	91220150	91284329	chr10:91220150-91284329	1	+	91222871	91278316	0	10	177,295,97,56,60,149,99,90,60,6061,	0,2538,20333,28354,28514,31141,41175,44280,51487,58118,
#Deleted in new
chr10	91220176	91222929	chr10:91220176-91222929	0	+	91220176	91220176	8553170	3	104,466,241,	0,194,2512,
#Partially deleted in new
chr10	91220782	91227960	chr10:91220782-91227960	0	+	91220782	91220782	789624	3	54,295,624,	0,1906,6554,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	91220787	91284331	chr10:91220787-91284331	1	+	91222871	91278316	0	10	49,295,97,56,60,149,99,90,60,6063,	0,1901,19696,27717,27877,30504,40538,43643,50850,57481,
#Partially deleted in new
chr10	91409279	91460549	chr10:91409279-91460549	0	+	91460479	91460549	789624	3	142,130,123,	0,16001,51147,
#Partially deleted in new
chr10	91410284	91514826	chr10:91410284-91514826	1	+	91410438	91512384	789624	22	292,130,139,103,90,65,46,110,12,149,124,97,108,133,89,159,75,88,107,116,144,2563,	0,14996,50142,50969,51810,67916,70809,72682,74049,74222,74895,77397,80915,82067,83135,85929,87823,88587,88759,90217,90906,101979,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	91410343	91463664	chr10:91410343-91463664	1	+	91410438	91462208	789624	5	233,130,139,103,1570,	0,14937,50083,50910,51751,
#Partially deleted in new
chr10	91410344	91514761	chr10:91410344-91514761	3	+	91410438	91512384	789624	21	232,130,139,103,90,65,46,110,149,124,97,108,133,89,159,75,88,107,116,144,2498,	0,14936,50082,50909,51750,67856,70749,72622,74162,74835,77337,80855,82007,83075,85869,87763,88527,88699,90157,90846,101919,
#Deleted in new
chr10	91464577	91464708	chr10:91464577-91464708	7	-	91464577	91464577	16724991	1	131,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	91484089	91489981	chr10:91484089-91489981	0	+	91484089	91484089	8553170	2	566,4802,	0,1090,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	91484107	91514829	chr10:91484107-91514829	1	+	91485259	91512384	789624	13	548,124,97,108,133,89,159,75,88,107,116,144,2566,	0,1072,3574,7092,8244,9312,12106,14000,14764,14936,16394,17083,28156,
#Deleted in new
chr10	91544851	91545098	chr10:91544851-91545098	7	+	91544851	91544851	16724991	1	247,	0,
#Partially deleted in new
chr10	91628441	91633054	chr10:91628441-91633054	3	-	91629926	91632969	789624	2	2425,99,	0,4514,
#Deleted in new
chr10	91666779	91667782	chr10:91666779-91667782	7	-	91666779	91666779	16724991	1	1003,	0,
#Deleted in new
chr10	91765898	91767196	chr10:91765898-91767196	7	-	91765898	91765898	16724991	1	1298,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	91782838	91798291	chr10:91782838-91798291	0	-	91782838	91782838	789624	2	322,55,	0,15398,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	91782935	91798196	chr10:91782935-91798196	3	-	91782935	91782935	789624	2	225,384,	0,14877,
#Partially deleted in new
chr10	91798311	91865276	chr10:91798311-91865276	3	+	91798690	91862999	0	27	578,225,96,37,76,95,67,187,122,92,79,172,80,146,166,220,110,189,253,83,121,98,75,106,187,157,2340,	0,14671,18822,20958,21170,21627,23984,28705,29973,32611,32791,35541,38607,42249,42971,43860,46607,47440,50071,51200,52904,56717,57302,59113,61150,63687,64625,
#Deleted in new
chr10	91807178	91807439	chr10:91807178-91807439	7	-	91807178	91807178	16724991	1	261,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	91896703	91896897	chr10:91896703-91896897	7	+	91896703	91896703	16724991	1	194,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	91906588	91909483	chr10:91906588-91909483	3	-	91908192	91908969	789624	2	2459,86,	0,2809,
#Deleted in new
chr10	91908130	91909348	chr10:91908130-91909348	3	+	91908130	91908130	8553170	2	119,452,	0,766,
#Partially deleted in new
chr10	91923768	92030325	chr10:91923768-92030325	3	+	91924076	92028933	789624	38	322,124,115,147,164,137,130,69,90,96,177,141,125,121,105,150,143,175,204,427,191,154,110,202,149,153,122,168,78,130,142,131,126,153,212,160,171,1536,	0,11888,16183,18653,27634,29968,32759,33456,35296,36016,36209,38769,40308,42868,56685,57874,58314,58818,60432,65385,68350,69925,70766,72600,73834,84354,85060,85272,87304,87517,89898,90130,92571,95014,100987,102823,103361,105021,
#Partially deleted in new
chr10	91935151	92030321	chr10:91935151-92030321	1	+	91935151	92028933	789624	38	9,129,115,147,164,137,130,69,90,96,177,141,125,121,105,150,143,175,204,427,191,154,110,202,149,153,122,168,78,130,142,131,126,153,212,160,171,1532,	0,500,4800,7270,16251,18585,21376,22073,23913,24633,24826,27386,28925,31485,45302,46491,46931,47435,49049,54002,56967,58542,59383,61217,62451,72971,73677,73889,75921,76134,78515,78747,81188,83631,89604,91440,91978,93638,
#Partially deleted in new
chr10	91956620	91989395	chr10:91956620-91989395	0	+	91956620	91956620	8553170	14	37,69,218,96,177,141,125,121,105,150,143,175,204,242,	0,604,2444,3164,3357,5917,7456,10016,23833,25022,25462,25966,27580,32533,
#Deleted in new
chr10	91980519	91982415	chr10:91980519-91982415	0	+	91980519	91980519	8553170	3	39,150,333,	0,1123,1563,
#Partially deleted in new
chr10	92046691	92243246	chr10:92046691-92243246	1	-	92052211	92240350	0	10	5748,182,115,119,90,168,57,91,1016,78,	0,34628,45138,64384,96337,98253,134271,145854,192654,196477,
#Partially deleted in new
chr10	92048641	92243279	chr10:92048641-92243279	1	-	92052211	92240350	0	10	3798,182,115,119,90,141,57,160,1016,111,	0,32678,43188,62434,94387,96303,132321,143835,190704,194527,
#Partially deleted in new
chr10	92049630	92291087	chr10:92049630-92291087	3	-	92052211	92240350	0	10	2809,182,115,119,90,141,57,160,1016,162,	0,31689,42199,61445,93398,95314,131332,142846,189715,241295,
#Deleted in new
chr10	92076241	92076365	chr10:92076241-92076365	3	+	92076241	92076241	8553170	1	124,	0,
#Deleted in new
chr10	92118663	92119164	chr10:92118663-92119164	7	+	92118663	92118663	16724991	1	501,	0,
#Partially deleted in new
chr10	92136874	92138370	chr10:92136874-92138370	7	+	92136874	92136874	16724991	2	838,352,	0,1144,
#Deleted in new
chr10	92204228	92204306	chr10:92204228-92204306	3	-	92204228	92204228	8553170	1	78,	0,
#Deleted in new
chr10	92216331	92216793	chr10:92216331-92216793	7	+	92216331	92216331	16724991	1	462,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	92272146	92272250	chr10:92272146-92272250	3	-	92272146	92272146	8553170	1	104,	0,
#Partially deleted in new
chr10	92291162	92353964	chr10:92291162-92353964	3	+	92291494	92351207	789624	6	367,203,131,184,167,2874,	0,19972,49510,58186,58508,59928,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	92308477	92349775	chr10:92308477-92349775	0	+	92308477	92308477	8553170	5	126,203,131,184,105,	0,2657,32195,40871,41193,
#Partially deleted in new
chr10	92333506	92349423	chr10:92333506-92349423	0	+	92333506	92333506	8553170	3	119,131,75,	0,7166,15842,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	92334462	92334564	chr10:92334462-92334564	3	+	92334462	92334462	8553170	1	102,	0,
#Deleted in new
chr10	92349480	92350298	chr10:92349480-92350298	0	+	92349480	92349480	8553170	2	52,628,	0,190,
#Deleted in new
chr10	92418666	92420875	chr10:92418666-92420875	7	+	92418666	92418666	16724991	2	1675,52,	0,2157,
#Partially deleted in new
chr10	92451683	92574076	chr10:92451683-92574076	3	-	92454443	92574019	0	25	2856,68,73,62,273,168,112,92,121,111,145,83,123,103,104,81,92,93,163,113,123,170,208,185,155,	0,3892,4675,9507,12047,13992,17195,18570,23157,24200,27593,31571,35512,38809,53110,54758,55891,56429,57044,58366,63236,80064,82894,85682,122238,
#Partially deleted in new
chr10	92451683	92497761	chr10:92451683-92497761	1	-	92454443	92483328	0	15	2856,68,73,62,273,168,112,92,121,111,145,83,123,103,90,	0,3892,4675,9507,12047,13992,17195,18570,23157,24200,27593,31571,35512,38809,45988,
#Partially deleted in new
chr10	92451683	92574076	chr10:92451683-92574076	1	-	92454443	92574019	789624	25	2856,68,73,62,273,168,112,92,121,111,145,83,123,103,104,81,92,93,163,113,123,170,208,185,155,	0,3892,4675,9507,12047,13992,17195,18570,23157,24200,26961,31571,35512,38809,53110,54758,55891,56429,57044,58366,63236,80064,82894,85682,122238,
#Partially deleted in new
chr10	92454268	92497733	chr10:92454268-92497733	0	-	92454268	92454268	8553170	15	271,68,73,62,273,168,112,92,121,111,145,83,123,103,62,	0,1307,2090,6922,9462,11407,14610,15985,20572,21615,24376,28986,32927,36224,43403,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr10	92474471	92574067	chr10:92474471-92574067	0	-	92559127	92574019	789624	23	490,111,145,145,124,83,123,103,104,81,92,93,163,113,123,170,208,185,48,37,129,182,146,	0,1412,4173,4805,6321,8783,12724,16021,30322,31970,33103,33641,34256,35578,40448,57276,60106,62894,80250,80409,84322,84562,99450,
#Partially deleted in new
chr10	92475944	92479587	chr10:92475944-92479587	0	-	92475944	92475944	8553170	3	50,145,311,	0,2700,3332,
#Partially deleted in new
chr10	92475971	92479735	chr10:92475971-92479735	0	-	92475971	92475971	8553170	2	23,459,	0,3305,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	92480556	92497749	chr10:92480556-92497749	0	-	92480556	92480556	8553170	5	360,83,123,103,78,	0,2698,6639,9936,17115,
#Partially deleted in new
chr10	92510132	92541353	chr10:92510132-92541353	0	-	92510132	92541353	789624	6	30,123,170,208,185,56,	0,4787,21615,24445,27233,31165,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr10	92593285	92655395	chr10:92593285-92655395	3	+	92593375	92653796	0	22	167,133,98,79,186,125,91,243,96,89,88,189,208,173,126,159,107,280,223,152,117,1731,	0,12979,13333,13873,15734,16099,19754,20091,23451,28099,35522,36890,39200,40337,43898,44101,46508,52077,54926,56549,57115,60379,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	92596851	92597287	chr10:92596851-92597287	7	-	92596851	92596851	16724991	1	436,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	92659043	92659302	chr10:92659043-92659302	3	+	92659043	92659043	8553170	1	259,	0,
#Deleted in new
chr10	92668744	92669743	chr10:92668744-92669743	7	-	92668744	92668744	16724991	1	999,	0,
#Deleted in new
chr10	92689950	92695646	chr10:92689950-92695646	3	+	92689986	92694768	0	4	397,179,51,1100,	0,2417,2751,4596,
#Deleted in new
chr10	92689954	92692483	chr10:92689954-92692483	0	+	92689954	92689954	8553170	2	393,914,	0,1615,
#Deleted in new
chr10	92691819	92695641	chr10:92691819-92695641	1	+	92692522	92694768	789624	4	280,179,51,1095,	0,548,882,2727,
#Deleted in new
chr10	92692031	92694788	chr10:92692031-92694788	1	+	92692522	92694768	789624	3	515,51,242,	0,670,2515,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	92710498	92710608	chr10:92710498-92710608	3	-	92710498	92710498	8553170	1	110,	0,
#Partially deleted in new
chr10	92834712	93059493	chr10:92834712-93059493	1	+	92834738	93058355	789624	22	112,172,48,91,46,205,156,69,84,47,121,72,98,106,110,112,135,180,142,74,113,1271,	0,58636,60081,60217,64886,74714,81045,85269,93626,99431,99597,101101,106014,113561,117560,119917,120867,139340,162761,179481,222211,223510,
#Partially deleted in new
chr10	92848467	93059493	chr10:92848467-93059493	1	+	92848533	93058355	789624	18	167,172,48,91,46,205,156,84,98,106,110,112,135,180,142,74,113,1271,	0,44881,46326,46462,51131,60959,67290,79871,92259,99806,103805,106162,107112,125585,149006,165726,208456,209755,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	92848484	92901851	chr10:92848484-92901851	1	+	92848533	92899648	789624	5	150,172,48,91,2253,	0,44864,46309,46445,51114,
#Partially deleted in new
chr10	92848519	93059490	chr10:92848519-93059490	3	+	92848533	93058355	789624	22	115,172,48,91,46,205,156,69,84,47,121,72,98,106,110,112,135,180,142,74,113,1268,	0,44829,46274,46410,51079,60907,67238,71462,79819,85624,85790,87294,92207,99754,103753,106110,107060,125533,148954,165674,208404,209703,
#Deleted in new
chr10	92878091	92878289	chr10:92878091-92878289	7	-	92878091	92878091	16724991	1	198,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	92909483	92916030	chr10:92909483-92916030	0	+	92909483	92909483	8553170	2	148,273,	0,6274,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr10	92928373	93058524	chr10:92928373-93058524	0	+	92928419	92999338	789624	15	49,47,121,72,98,106,110,112,135,180,142,138,74,113,302,	0,5770,5936,7440,12353,19900,23899,26256,27206,45679,69100,70876,85820,128550,129849,
#Partially deleted in new
chr10	92997473	93014267	chr10:92997473-93014267	0	+	92997473	93014267	789624	2	142,74,	0,16720,
#Deleted in new
chr10	93059662	93060426	chr10:93059662-93060426	3	-	93059662	93059662	8553170	2	243,199,	0,565,
#Partially deleted in new
chr10	93060807	93069536	chr10:93060807-93069536	0	+	93061263	93063199	789624	6	660,225,1596,180,330,1217,	0,1202,1912,3775,5148,7512,
#Partially deleted in new
chr10	93061263	93068697	chr10:93061263-93068697	3	+	93061263	93068697	789624	6	204,225,276,156,330,378,	0,746,1456,3117,4692,7056,
#Partially deleted in new
chr10	93063645	93077424	chr10:93063645-93077424	3	+	93063645	93063645	8553170	4	891,135,153,462,	0,12180,12898,13317,
#Partially deleted in new
chr10	93071971	93073466	chr10:93071971-93073466	3	+	93071971	93071971	8553170	2	110,457,	0,1038,
#Deleted in new
chr10	93073474	93077884	chr10:93073474-93077884	1	+	93074325	93077304	789624	7	360,225,291,159,135,153,922,	0,833,1304,1674,2351,3069,3488,
#Deleted in new
chr10	93073889	93077890	chr10:93073889-93077890	3	+	93073934	93077304	789624	7	234,225,291,159,135,153,928,	0,418,889,1259,1936,2654,3073,
#Deleted in new
chr10	93074077	93075275	chr10:93074077-93075275	0	+	93074077	93074077	8553170	3	46,225,497,	0,230,701,
#Deleted in new
chr10	93074311	93077479	chr10:93074311-93077479	0	+	93074325	93075959	789624	6	221,271,159,135,153,517,	0,487,837,1514,2232,2651,
#Deleted in new
chr10	93075628	93077319	chr10:93075628-93077319	0	+	93075628	93075628	8553170	3	332,153,357,	0,915,1334,
#Deleted in new
chr10	93076332	93077082	chr10:93076332-93077082	0	+	93076332	93076332	8553170	2	364,120,	0,630,
#Partially deleted in new
chr10	93106871	93107383	chr10:93106871-93107383	7	-	93106871	93106871	16724991	1	512,	0,
#Partially deleted in new
chr10	93206856	93209627	chr10:93206856-93209627	7	-	93206856	93206856	16724991	4	499,443,657,206,	0,859,1623,2565,
#Deleted in new
chr10	93284003	93284558	chr10:93284003-93284558	7	-	93284003	93284003	16724991	1	555,	0,
#Partially deleted in new
chr10	93306428	93379987	chr10:93306428-93379987	0	-	93323092	93379987	789624	34	573,148,110,191,100,142,96,140,149,171,92,156,126,99,12,57,77,166,162,99,159,182,78,109,174,146,106,115,164,132,156,193,107,125,	0,3591,4105,6591,10285,13443,16649,19397,22334,23235,26792,27329,29492,31386,33724,35484,37427,41188,43379,44768,44984,45236,47382,49199,50246,53404,55023,57532,59963,63216,66501,68334,70894,73434,
#Partially deleted in new
chr10	93306429	93482194	chr10:93306429-93482194	1	-	93306962	93482194	0	53	572,148,110,191,100,142,96,89,140,149,171,92,156,126,99,12,77,166,162,99,159,182,78,109,174,146,106,115,164,132,156,193,107,125,178,117,125,83,44,69,104,127,116,31,51,63,129,167,88,109,92,56,88,	0,3590,4104,6590,10284,13442,16648,16840,19396,22333,23234,26791,27328,29491,31385,33723,37426,41187,43378,44767,44983,45235,47381,49198,50245,53403,55022,57531,59962,63215,66500,68333,70893,73433,74789,81367,82600,89712,90817,90958,92962,94988,95802,96430,97593,97727,102357,103143,119641,124978,145620,150452,175677,
#Partially deleted in new
chr10	93306429	93482194	chr10:93306429-93482194	3	-	93306962	93482194	0	54	572,148,110,191,100,142,96,89,140,149,171,92,156,126,99,12,77,166,162,99,159,182,78,109,174,146,106,115,164,132,156,193,107,125,178,117,125,39,83,44,69,104,127,116,31,51,63,129,167,88,109,92,56,88,	0,3590,4104,6590,10284,13442,16648,16840,19396,22333,23234,26791,27328,29491,31385,33723,37426,41187,43378,44767,44983,45235,47381,49198,50245,53403,55022,57531,59962,63215,66500,68333,70893,73433,74789,81367,82600,86487,89712,90817,90958,92962,94988,95802,96430,97593,97727,102357,103143,119641,124978,145620,150452,175677,
#Deleted in new
chr10	93323117	93323675	chr10:93323117-93323675	0	-	93323117	93323117	8553170	2	56,406,	0,152,
#Partially deleted in new
chr10	93324269	93329773	chr10:93324269-93329773	0	-	93324269	93324269	8553170	4	298,140,149,110,	0,1556,4493,5394,
#Partially deleted in new
chr10	93337527	93340249	chr10:93337527-93340249	0	-	93337527	93337527	8553170	2	386,97,	0,2625,
#Partially deleted in new
chr10	93397184	93482317	chr10:93397184-93482317	1	-	93397242	93482194	0	15	106,69,104,127,116,31,51,63,129,167,88,109,92,56,211,	0,203,2207,4233,5047,5675,6838,6972,11602,12388,28886,34223,54865,59697,84922,
#Partially deleted in new
chr10	93425740	93482194	chr10:93425740-93482194	1	-	93426020	93482194	0	5	418,109,92,56,88,	0,5667,26309,31141,56366,
#Partially deleted in new
chr10	93426070	93482194	chr10:93426070-93482194	0	-	93426070	93426070	8553170	6	88,109,92,56,194,88,	0,5337,25979,30811,52109,56036,
#Partially deleted in new
chr10	93496631	93529092	chr10:93496631-93529092	3	+	93500051	93528153	0	9	292,195,276,69,151,314,72,126,1143,	0,3408,6481,10356,18773,20303,22245,23050,31318,
#Partially deleted in new
chr10	93507009	93519111	chr10:93507009-93519111	0	+	93507009	93518990	789624	4	47,151,314,235,	0,8395,9925,11867,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	93510547	93510680	chr10:93510547-93510680	7	-	93510547	93510547	16724991	1	133,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	93517206	93520277	chr10:93517206-93520277	0	+	93517206	93517206	8553170	3	42,72,596,	0,1670,2475,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	93566664	93590072	chr10:93566664-93590072	3	+	93566720	93587609	789624	3	623,129,2853,	0,9426,20555,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	93566664	93590072	chr10:93566664-93590072	1	+	93566720	93587609	789624	4	623,129,48,2853,	0,9426,12494,20555,
#Partially deleted in new
chr10	93566681	93604480	chr10:93566681-93604480	1	+	93566720	93604088	789624	3	606,129,407,	0,9409,37392,
#Partially deleted in new
chr10	93591686	93601226	chr10:93591686-93601226	1	-	93592074	93601028	0	6	426,213,107,137,129,56,	0,2136,8706,8980,9231,9484,
#Partially deleted in new
chr10	93591686	93601663	chr10:93591686-93601663	3	-	93592074	93601028	0	6	426,213,107,137,129,302,	0,2136,8706,8980,9231,9675,
#Partially deleted in new
chr10	93591836	93601716	chr10:93591836-93601716	1	-	93592074	93601716	789624	6	276,213,107,137,58,47,	0,1986,8556,8830,9081,9833,
#Partially deleted in new
chr10	93591888	93601744	chr10:93591888-93601744	1	-	93592074	93601716	789624	6	224,213,107,137,54,79,	0,1934,8504,8778,9029,9777,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr10	93612587	93666010	chr10:93612587-93666010	3	+	93612725	93665418	0	22	618,153,90,141,75,65,67,48,150,144,69,147,108,110,88,101,108,64,75,84,151,651,	0,8044,8303,9344,12987,14052,14217,16670,22170,22909,24407,27482,27862,28332,33372,43172,46313,46516,49471,49972,50440,52772,
#Partially deleted in new
chr10	93662055	93665673	chr10:93662055-93665673	0	+	93662055	93662055	8553170	3	78,84,314,	0,504,3304,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	93667882	93702572	chr10:93667882-93702572	3	-	93669825	93700106	789624	14	1986,79,39,119,43,114,46,85,84,77,46,96,77,198,	0,2887,8770,13597,16173,17363,19521,24126,24763,26978,30253,30418,32147,34492,
#Deleted in new
chr10	93669623	93675304	chr10:93669623-93675304	0	-	93669623	93669623	8553170	2	245,4535,	0,1146,
#Deleted in new
chr10	93669678	93672091	chr10:93669678-93672091	0	-	93669678	93669678	8553170	4	190,79,79,50,	0,1091,2147,2363,
#Deleted in new
chr10	93670774	93673031	chr10:93670774-93673031	0	-	93670774	93670774	8553170	2	74,990,	0,1267,
#Deleted in new
chr10	93684054	93685463	chr10:93684054-93685463	0	-	93684054	93684054	8553170	2	44,218,	0,1191,
#Deleted in new
chr10	93685252	93687941	chr10:93685252-93687941	0	-	93685252	93685252	8553170	2	107,538,	0,2151,
#Partially deleted in new
chr10	93757808	93798174	chr10:93757808-93798174	3	+	93758144	93797803	0	8	551,72,72,72,72,170,165,1207,	0,951,19570,19737,32290,34934,35377,39159,
#Partially deleted in new
chr10	93757839	93798174	chr10:93757839-93798174	0	+	93758144	93758363	789624	6	529,72,135,170,165,1207,	0,920,32259,34903,35346,39128,
#Partially deleted in new
chr10	93757850	93798158	chr10:93757850-93798158	1	+	93758144	93797803	789624	7	509,72,72,72,170,165,1191,	0,19528,19695,32248,34892,35335,39117,
#Partially deleted in new
chr10	93757874	93793347	chr10:93757874-93793347	0	+	93758144	93758363	789624	7	494,72,72,72,72,170,162,	0,885,19504,19671,32224,34868,35311,
#Deleted in new
chr10	93757912	93758912	chr10:93757912-93758912	1	+	93758144	93758835	789624	2	447,153,	0,847,
#Partially deleted in new
chr10	93757935	93798059	chr10:93757935-93798059	0	+	93758144	93758363	789624	9	433,72,72,72,72,52,170,165,1092,	0,824,19443,19610,32163,33752,34807,35250,39032,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	93757937	93792396	chr10:93757937-93792396	1	+	93758144	93790174	789624	5	422,72,72,72,2298,	0,822,19441,19608,32161,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	93757961	93798108	chr10:93757961-93798108	0	+	93758144	93793901	789624	9	398,72,72,72,72,170,165,268,1141,	0,798,19417,19584,32137,34781,35224,35932,39006,
#Partially deleted in new
chr10	93757961	93798122	chr10:93757961-93798122	0	+	93758144	93790174	789624	8	398,72,72,72,135,170,165,1155,	0,798,19417,19584,32137,34781,35224,39006,
#Partially deleted in new
chr10	93757967	93798114	chr10:93757967-93798114	0	+	93758144	93758363	789624	8	397,72,72,72,72,170,165,1147,	0,792,19411,19578,32131,34775,35218,39000,
#Partially deleted in new
chr10	93757970	93797850	chr10:93757970-93797850	1	+	93758144	93797803	0	6	389,72,72,170,165,883,	0,789,32128,34772,35215,38997,
#Partially deleted in new
chr10	93757970	93798110	chr10:93757970-93798110	0	+	93758144	93783022	789624	9	389,72,72,72,301,72,170,165,1143,	0,789,19408,19575,24772,32128,34772,35215,38997,
#Partially deleted in new
chr10	93757970	93798108	chr10:93757970-93798108	1	+	93797500	93797803	789624	8	38,72,72,72,72,170,165,1141,	0,789,19408,19575,32128,34772,35215,38997,
#Partially deleted in new
chr10	93757970	93798110	chr10:93757970-93798110	0	+	93758144	93758786	789624	8	306,72,72,72,72,170,165,1143,	0,789,19408,19575,32128,34772,35215,38997,
#Partially deleted in new
chr10	93757980	93798127	chr10:93757980-93798127	0	+	93758144	93758835	789624	8	379,532,72,72,72,170,165,379,	0,779,19398,19565,32118,34762,35205,39768,
#Partially deleted in new
chr10	93758014	93798113	chr10:93758014-93798113	0	+	93758144	93780306	789624	9	345,72,72,72,51,72,170,165,1146,	0,745,19364,19531,22267,32084,34728,35171,38953,
#Partially deleted in new
chr10	93758027	93806134	chr10:93758027-93806134	1	+	93758144	93805497	789624	8	332,72,72,72,72,170,165,663,	0,732,19351,19518,32071,34715,35158,47444,
#Deleted in new
chr10	93758075	93759130	chr10:93758075-93759130	1	+	93758144	93758363	789624	2	293,371,	0,684,
#Partially deleted in new
chr10	93758144	93798157	chr10:93758144-93798157	1	+	93758144	93797786	0	8	215,72,72,72,72,170,165,409,	0,615,19234,19401,31954,34598,35041,39604,
#Partially deleted in new
chr10	93758540	93798174	chr10:93758540-93798174	0	+	93758540	93758540	8553170	7	148,72,72,72,170,165,1207,	0,18838,19005,31558,34202,34645,38427,
#Partially deleted in new
chr10	93758759	93776880	chr10:93758759-93776880	0	+	93758759	93758759	8553170	2	72,26,	0,18095,
#Deleted in new
chr10	93758789	93763625	chr10:93758789-93763625	0	+	93758789	93758789	8553170	2	42,58,	0,4778,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	93762452	93771991	chr10:93762452-93771991	3	+	93762452	93762452	8553170	2	3237,5207,	0,4332,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	93772680	93788605	chr10:93772680-93788605	3	-	93772680	93772680	8553170	4	227,70,73,74,	0,3277,4272,15851,
#Deleted in new
chr10	93776866	93777405	chr10:93776866-93777405	0	+	93776866	93776866	8553170	2	73,27,	0,512,
#Partially deleted in new
chr10	93777176	93790161	chr10:93777176-93790161	0	+	93777176	93777176	8553170	3	274,72,63,	0,369,12922,
#Partially deleted in new
chr10	93777556	93778987	chr10:93777556-93778987	0	+	93777556	93777556	8553170	2	61,204,	0,1227,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	93788324	93798158	chr10:93788324-93798158	0	+	93788324	93788324	8553170	3	4588,165,1191,	0,4861,8643,
#Partially deleted in new
chr10	93788655	93793273	chr10:93788655-93793273	0	+	93788655	93788655	8553170	4	219,72,170,88,	0,1443,4087,4530,
#Partially deleted in new
chr10	93792842	93796999	chr10:93792842-93796999	0	+	93792842	93792842	8553170	2	508,32,	0,4125,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	93794553	93798110	chr10:93794553-93798110	0	+	93794553	93794553	8553170	2	272,1143,	0,2414,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	93801167	93806272	chr10:93801167-93806272	0	+	93801167	93801167	8553170	3	1157,92,801,	0,2057,4304,
#Deleted in new
chr10	93881292	93881938	chr10:93881292-93881938	7	-	93881292	93881292	16724991	1	646,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	93893972	93903824	chr10:93893972-93903824	3	+	93894033	93901490	789624	3	239,178,3073,	0,4601,6779,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	93893972	93902733	chr10:93893972-93902733	1	+	93894033	93901490	789624	3	239,181,1982,	0,4598,6779,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	93893990	93909830	chr10:93893990-93909830	0	+	93894033	93906265	789624	3	170,134,2732,	0,12261,13108,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	93894000	93954256	chr10:93894000-93954256	0	+	93894033	93906265	789624	4	211,134,133,248,	0,12251,18666,60008,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	93894021	93909825	chr10:93894021-93909825	0	+	93894033	93906265	789624	3	190,134,1798,	0,12230,14006,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	93958190	93961540	chr10:93958190-93961540	7	-	93958190	93958190	16724991	1	3350,	0,
#Deleted in new
chr10	93958807	93961540	chr10:93958807-93961540	5	-	93958807	93958807	16724991	1	2733,	0,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr10	94030811	94332823	chr10:94030811-94332823	3	+	94031046	94325080	0	32	1441,286,317,146,259,206,676,183,118,157,123,137,239,62,166,108,117,159,130,122,118,132,291,164,262,119,129,210,159,219,213,4856,	0,101362,140368,196494,203242,205103,215134,221504,223378,224081,227988,228202,231682,234835,234981,238117,239674,242750,248970,252978,254036,262696,267567,273670,275615,277769,282442,285735,291089,293537,294080,297156,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	94081949	94108780	chr10:94081949-94108780	3	-	94081949	94081949	789624	8	257,66,112,70,118,120,139,63,	0,6186,12724,14430,14809,22388,25782,26768,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr10	94089025	94328389	chr10:94089025-94328389	1	+	94089094	94325080	0	32	351,286,317,146,259,206,676,183,118,157,123,137,239,62,166,108,117,159,130,122,118,132,291,164,262,119,129,210,159,219,213,422,	0,43148,82154,138280,145028,146889,156920,163290,165164,165867,169774,169988,173468,176621,176767,179903,181460,184536,190756,194764,195822,204482,209353,215456,217401,219555,224228,227521,232875,235323,235866,238942,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr10	94089094	94325609	chr10:94089094-94325609	1	+	94089094	94325080	0	31	282,286,317,146,259,206,676,183,118,157,123,137,239,62,166,108,117,159,130,122,118,132,291,164,262,119,129,210,159,219,718,	0,43079,82085,138211,144959,146820,156851,163221,165095,165798,169705,169919,173399,176552,176698,179834,181391,184467,190687,194695,195753,204413,209284,215387,217332,219486,224159,227452,232806,235254,235797,
#Partially deleted in new
chr10	94099647	94108785	chr10:94099647-94108785	1	-	94099647	94099647	789624	3	1046,138,428,	0,4690,8710,
#Partially deleted in new
chr10	94100495	94107872	chr10:94100495-94107872	1	-	94100495	94100495	8553170	3	198,120,141,	0,3842,7236,
#Deleted in new
chr10	94104125	94108749	chr10:94104125-94108749	1	-	94104125	94104125	8553170	4	115,120,160,32,	0,212,3585,4592,
#Deleted in new
chr10	94104125	94108785	chr10:94104125-94108785	0	-	94104125	94104125	8553170	3	115,120,428,	0,212,4232,
#Deleted in new
chr10	94104431	94107870	chr10:94104431-94107870	0	-	94104431	94104431	8553170	3	44,585,160,	0,1143,3279,
#Deleted in new
chr10	94104431	94105355	chr10:94104431-94105355	0	-	94104431	94104431	8553170	1	924,	0,
#Deleted in new
chr10	94104431	94108784	chr10:94104431-94108784	1	-	94104431	94104431	8553170	5	26,174,139,34,67,	0,1589,3300,3926,4286,
#Deleted in new
chr10	94104431	94108814	chr10:94104431-94108814	0	-	94104431	94104431	8553170	4	44,139,139,457,	0,1589,3300,3926,
#Deleted in new
chr10	94104431	94108785	chr10:94104431-94108785	1	-	94104431	94104431	8553170	5	26,139,89,139,68,	0,1589,2635,3300,4286,
#Deleted in new
chr10	94104431	94108680	chr10:94104431-94108680	1	-	94104431	94104431	8553170	4	44,139,160,323,	0,1589,3279,3926,
#Deleted in new
chr10	94105574	94108536	chr10:94105574-94108536	1	-	94105574	94105574	8553170	4	85,139,139,179,	0,446,2157,2783,
#Deleted in new
chr10	94105576	94108788	chr10:94105576-94108788	1	-	94105576	94105576	8553170	4	83,139,139,71,	0,444,2155,3141,
#Deleted in new
chr10	94107592	94108475	chr10:94107592-94108475	1	-	94107592	94107592	8553170	2	278,118,	0,765,
#Partially deleted in new
chr10	94109115	94121107	chr10:94109115-94121107	3	+	94109115	94109115	8553170	2	55,391,	0,11601,
#Partially deleted in new
chr10	94137747	94139500	chr10:94137747-94139500	7	+	94137747	94137747	16724991	2	1252,193,	0,1560,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	94155638	94155745	chr10:94155638-94155745	3	-	94155638	94155638	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	94225159	94227288	chr10:94225159-94227288	3	-	94225159	94225159	8553170	2	221,163,	0,1966,
#Partially deleted in new
chr10	94279276	94287070	chr10:94279276-94287070	3	-	94279276	94279276	8553170	3	1353,100,230,	0,4110,7564,
#Partially deleted in new
chr10	94279304	94287047	chr10:94279304-94287047	1	-	94279304	94279304	789624	4	1027,36,100,207,	0,1289,4082,7536,
#Partially deleted in new
chr10	94280011	94286987	chr10:94280011-94286987	0	-	94280011	94280011	8553170	3	320,100,147,	0,3375,6829,
#Partially deleted in new
chr10	94283160	94287478	chr10:94283160-94287478	0	-	94283160	94283160	8553170	2	326,638,	0,3680,
#Deleted in new
chr10	94314906	94315327	chr10:94314906-94315327	3	-	94314906	94314906	8553170	1	421,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	94324888	94325656	chr10:94324888-94325656	0	+	94324888	94324888	8553170	2	216,454,	0,314,
#Partially deleted in new
chr10	94333225	94362939	chr10:94333225-94362939	3	-	94334176	94362838	789624	21	1080,85,98,129,182,72,64,73,101,81,132,129,176,94,162,131,57,158,133,208,110,	0,1408,4551,5382,6513,7050,7207,8447,11189,11627,13199,16024,16887,19084,19670,21737,23309,23948,24857,28439,29604,
#Partially deleted in new
chr10	94346475	94362939	chr10:94346475-94362939	0	-	94346475	94346475	8553170	10	81,129,176,94,162,131,57,1042,208,110,	0,2774,3637,5834,6420,8487,10059,10698,15189,16354,
#Partially deleted in new
chr10	94361323	94362959	chr10:94361323-94362959	0	-	94361323	94361323	8553170	3	238,208,130,	0,341,1506,
#Partially deleted in new
chr10	94402503	94535930	chr10:94402503-94535930	3	+	94402613	94533096	789624	13	1081,124,116,83,118,107,81,89,72,129,110,259,2903,	0,39392,72164,90861,94551,97717,104763,107587,109079,119451,119840,128698,130524,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr10	94501433	94602098	chr10:94501433-94602098	1	+	94562813	94601622	789624	20	55,25,37,65,42,228,183,144,197,97,162,140,139,84,120,117,160,97,77,571,	0,49538,61257,61378,69954,72526,73120,75228,79892,81529,86795,88979,89204,90795,90961,92065,93261,95426,95601,100094,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr10	94501433	94602098	chr10:94501433-94602098	1	+	94562706	94601622	789624	19	55,25,37,42,228,183,144,197,97,162,140,139,84,120,117,160,97,77,571,	0,49538,61257,69954,72526,73120,75228,79892,81529,86795,88979,89204,90795,90961,92065,93261,95426,95601,100094,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	94508441	94533297	chr10:94508441-94533297	0	+	94508441	94508441	8553170	4	1738,72,259,270,	0,3141,22760,24586,
#Deleted in new
chr10	94534338	94535928	chr10:94534338-94535928	0	+	94534338	94534338	8553170	2	117,302,	0,1288,
#Partially deleted in new
chr10	94545789	94574106	chr10:94545789-94574106	0	+	94546393	94574106	789624	8	118,122,123,57,37,65,42,147,	0,587,8336,12349,16901,17022,25598,28170,
#Partially deleted in new
chr10	94545815	94557196	chr10:94545815-94557196	1	+	94545921	94557196	789624	4	137,122,123,18,	0,561,8310,11363,
#Partially deleted in new
chr10	94545816	94602099	chr10:94545816-94602099	3	+	94545921	94601622	789624	22	136,122,123,57,37,65,42,228,183,144,197,97,162,140,139,84,120,117,160,97,77,572,	0,560,8309,12322,16874,16995,25571,28143,28737,30845,35509,37146,42412,44596,44821,46412,46578,47682,48878,51043,51218,55711,
#Partially deleted in new
chr10	94545921	94602098	chr10:94545921-94602098	1	+	94545921	94601622	789624	23	31,122,123,57,37,65,42,228,183,144,197,97,138,162,140,139,84,120,117,160,97,77,571,	0,455,8204,12217,16769,16890,25466,28038,28632,30740,35404,37041,38066,42307,44491,44716,46307,46473,47577,48773,50938,51113,55606,
#Partially deleted in new
chr10	94545921	94602098	chr10:94545921-94602098	1	+	94545921	94601622	789624	20	31,122,123,57,37,65,42,228,183,144,162,140,139,84,120,117,160,97,77,571,	0,455,8204,12217,16769,16890,25466,28038,28632,30740,42307,44491,44716,46307,46473,47577,48773,50938,51113,55606,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	94554123	94571280	chr10:94554123-94571280	0	+	94554123	94554123	8553170	5	125,57,37,65,494,	0,4015,8567,8688,16663,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	94569194	94574448	chr10:94569194-94574448	0	+	94569194	94569194	8553170	2	2235,489,	0,4765,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	94577438	94611238	chr10:94577438-94611238	3	+	94577438	94577438	8553170	2	207,438,	0,33362,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	94590698	94613905	chr10:94590698-94613905	0	+	94590698	94608025	789624	10	78,84,120,117,160,97,77,84,117,4053,	0,1530,1696,2800,3996,6161,6336,10829,17211,19154,
#Partially deleted in new
chr10	94590741	94592514	chr10:94590741-94592514	0	+	94590741	94590741	8553170	2	35,286,	0,1487,
#Partially deleted in new
chr10	94596879	94601971	chr10:94596879-94601971	0	+	94596879	94596879	8553170	2	232,444,	0,4648,
#Partially deleted in new
chr10	94646363	94647996	chr10:94646363-94647996	7	-	94646363	94646363	16724991	2	257,1077,	0,556,
#Partially deleted in new
chr10	94683620	94736190	chr10:94683620-94736190	3	+	94683819	94735444	0	9	367,163,150,161,177,142,188,142,928,	0,4149,4504,11296,23163,36775,40725,49676,51642,
#Partially deleted in new
chr10	94683774	94735574	chr10:94683774-94735574	1	+	94683819	94735444	0	8	213,163,150,161,142,188,142,312,	0,3995,4350,11142,36621,40571,49522,51488,
#Partially deleted in new
chr10	94688153	94853073	chr10:94688153-94853073	3	+	94688153	94775131	789624	14	121,161,177,142,188,142,163,150,161,177,142,188,142,341,	0,6763,18630,32242,36192,45143,86904,87236,92345,93667,132342,154683,161763,164579,
#Partially deleted in new
chr10	94762680	94853205	chr10:94762680-94853205	3	+	94762705	94852914	789624	9	193,163,150,161,177,142,188,142,473,	0,12377,12709,17818,19140,57815,80156,87236,90052,
#Partially deleted in new
chr10	94762680	94776450	chr10:94762680-94776450	1	+	94762705	94775547	789624	3	193,163,1061,	0,12377,12709,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	94773836	94853164	chr10:94773836-94853164	0	+	94773836	94773836	8553170	7	1384,150,161,177,188,142,432,	0,1553,6662,7984,69000,76080,78896,
#Partially deleted in new
chr10	94774155	94774633	chr10:94774155-94774633	7	-	94774155	94774155	16724991	1	478,	0,
#Partially deleted in new
chr10	94865851	94873129	chr10:94865851-94873129	7	-	94865851	94865851	16724991	3	152,151,172,	0,337,7106,
#Partially deleted in new
chr10	94882553	94883343	chr10:94882553-94883343	7	+	94882553	94882553	16724991	1	790,	0,
#Partially deleted in new
chr10	94938657	94989391	chr10:94938657-94989391	3	+	94938682	94989028	0	9	193,163,150,161,177,142,188,142,545,	0,3200,3534,9121,10450,33446,42525,47375,50189,
#Partially deleted in new
chr10	94938657	94943266	chr10:94938657-94943266	1	+	94938682	94942349	0	3	193,163,1075,	0,3200,3534,
#Partially deleted in new
chr10	94938679	94989391	chr10:94938679-94989391	0	+	94938682	94981212	789624	8	171,163,150,161,177,188,142,545,	0,3178,3512,9099,10428,42503,47353,50167,
#Partially deleted in new
chr10	94940252	94941121	chr10:94940252-94941121	7	-	94940252	94940252	16724991	1	869,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	94941536	94947891	chr10:94941536-94947891	0	+	94941536	94941536	8553170	3	484,150,113,	0,655,6242,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	94941918	94949535	chr10:94941918-94949535	0	+	94941918	94941918	8553170	4	102,150,161,428,	0,273,5860,7189,
#Partially deleted in new
chr10	95007125	95007556	chr10:95007125-95007556	7	-	95007125	95007125	16724991	2	85,184,	0,247,
#Partially deleted in new
chr10	95009673	95009812	chr10:95009673-95009812	7	+	95009673	95009673	16724991	1	139,	0,
#Partially deleted in new
chr10	95031639	95032048	chr10:95031639-95032048	7	+	95031639	95031639	16724991	1	409,	0,
#Partially deleted in new
chr10	95036771	95069497	chr10:95036771-95069497	1	-	95037127	95069221	0	8	538,142,188,142,177,161,150,301,	0,2125,6118,9038,21563,28028,30436,32425,
#Partially deleted in new
chr10	95036771	95069497	chr10:95036771-95069497	1	-	95037127	95067649	789624	10	538,142,188,142,177,161,150,163,62,301,	0,2125,6118,9038,21563,28028,30436,30757,31795,32425,
#Partially deleted in new
chr10	95036771	95069497	chr10:95036771-95069497	1	-	95037127	95067649	789624	9	538,142,188,142,177,161,150,163,301,	0,2125,6118,9038,21563,28028,30436,30757,32425,
#Partially deleted in new
chr10	95036772	95069497	chr10:95036772-95069497	3	-	95037127	95069402	0	9	537,142,188,142,177,161,150,163,263,	0,2124,6117,9037,21562,28027,30435,30756,32462,
#Partially deleted in new
chr10	95036772	95069497	chr10:95036772-95069497	0	-	95067645	95069402	789624	9	537,142,188,142,177,161,150,163,301,	0,2124,6117,9037,21562,28027,30435,30756,32424,
#Partially deleted in new
chr10	95036772	95069403	chr10:95036772-95069403	0	-	95040927	95069402	789624	10	537,142,39,188,142,177,161,150,163,169,	0,2124,4149,6117,9037,21562,28027,30435,30756,32462,
#Partially deleted in new
chr10	95036777	95069486	chr10:95036777-95069486	0	-	95036777	95036777	8553170	8	532,142,188,142,177,161,484,252,	0,2119,6112,9032,21557,28022,30430,32457,
#Partially deleted in new
chr10	95036777	95069486	chr10:95036777-95069486	0	-	95036777	95036777	8553170	9	532,142,39,188,142,177,161,484,252,	0,2119,4144,6112,9032,21557,28022,30430,32457,
#Partially deleted in new
chr10	95036801	95069427	chr10:95036801-95069427	0	-	95036801	95036801	8553170	8	508,142,188,142,177,161,484,231,	0,2095,6088,9008,21533,27998,30406,32395,
#Partially deleted in new
chr10	95036983	95069497	chr10:95036983-95069497	0	-	95067263	95069402	789624	8	326,142,188,142,177,161,150,301,	0,1913,5906,8826,21351,27816,30224,32213,
#Partially deleted in new
chr10	95037181	95039375	chr10:95037181-95039375	0	-	95037181	95037181	8553170	2	128,479,	0,1715,
#Partially deleted in new
chr10	95038958	95069497	chr10:95038958-95069497	0	-	95038958	95038958	8553170	8	80,39,188,142,177,161,484,301,	0,1963,3931,6851,19376,25841,28249,30238,
#Partially deleted in new
chr10	95040927	95067430	chr10:95040927-95067430	1	-	95040927	95067430	789624	6	33,188,142,177,161,223,	0,1962,4882,17407,23872,26280,
#Deleted in new
chr10	95173084	95173187	chr10:95173084-95173187	7	-	95173084	95173084	16724991	1	103,	0,
#Deleted in new
chr10	95183652	95184217	chr10:95183652-95184217	7	+	95183652	95183652	16724991	1	565,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	95194199	95226405	chr10:95194199-95226405	0	+	95194485	95207240	789624	9	104,213,201,208,144,157,83,81,1116,	0,265,7785,13008,16450,17678,18658,25691,31090,
#Partially deleted in new
chr10	95194199	95228928	chr10:95194199-95228928	3	+	95194485	95228784	789624	11	104,213,211,208,144,157,83,124,81,102,285,	0,265,7785,13008,16450,17678,18658,20652,25691,31090,34444,
#Partially deleted in new
chr10	95194476	95228924	chr10:95194476-95228924	1	+	95194485	95228784	789624	10	201,211,208,144,157,83,124,81,102,281,	0,7508,12731,16173,17401,18381,20375,25414,30813,34167,
#Partially deleted in new
chr10	95228242	95231144	chr10:95228242-95231144	3	-	95228242	95228242	8553170	2	184,479,	0,2423,
#Partially deleted in new
chr10	95237571	95291024	chr10:95237571-95291024	3	-	95237924	95290915	0	7	540,118,152,200,85,152,205,	0,996,9643,26292,31206,34061,53248,
#Deleted in new
chr10	95237939	95238848	chr10:95237939-95238848	0	-	95237939	95237939	8553170	2	172,281,	0,628,
#Partially deleted in new
chr10	95238009	95291012	chr10:95238009-95291012	0	-	95238009	95238009	8553170	6	102,118,152,200,85,193,	0,558,9205,25854,30768,52810,
#Partially deleted in new
chr10	95238633	95247620	chr10:95238633-95247620	0	-	95238633	95238633	8553170	2	52,406,	0,8581,
#Partially deleted in new
chr10	95263875	95273406	chr10:95263875-95273406	0	-	95263875	95263875	8553170	4	188,85,152,370,	0,4902,7757,9161,
#Partially deleted in new
chr10	95311770	95561378	chr10:95311770-95561378	1	-	95315058	95441135	0	32	3356,113,59,60,774,195,126,115,47,168,86,173,50,102,66,84,115,130,48,64,173,30,145,369,113,27,129,96,66,55,86,59,	0,6549,10192,10975,24750,27362,29514,29793,34635,39438,43111,45860,55879,59555,60213,64202,69914,72214,72467,85449,87246,94347,98862,102723,110190,110419,120677,122851,125719,129355,179264,249549,
#Partially deleted in new
chr10	95311772	95561414	chr10:95311772-95561414	1	-	95315058	95441135	0	26	3354,113,59,195,126,115,47,168,86,173,50,115,130,48,64,173,30,145,113,27,129,96,66,55,86,95,	0,6547,10190,27360,29512,29791,34633,39436,43109,45858,55877,69912,72212,72465,85447,87244,94345,98860,110188,110417,120675,122849,125717,129353,179262,249547,
#Partially deleted in new
chr10	95311772	95561378	chr10:95311772-95561378	1	-	95315058	95441135	0	25	3354,113,59,195,126,115,47,86,173,50,115,130,48,64,173,30,145,369,113,27,129,66,55,86,59,	0,6547,10190,27360,29512,29791,34633,43109,45858,55877,69912,72212,72465,85447,87244,94345,98860,102721,110188,110417,120675,125717,129353,179262,249547,
#Partially deleted in new
chr10	95311772	95339327	chr10:95311772-95339327	0	-	95315058	95339327	8553170	4	3354,113,191,195,	0,6547,10190,27360,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr10	95311773	95561378	chr10:95311773-95561378	1	-	95315058	95441135	0	33	3353,113,59,285,195,126,115,47,168,86,173,50,102,66,84,115,130,48,129,75,64,173,30,145,369,113,27,129,96,66,55,86,59,	0,6546,10189,24747,27359,29511,29790,34632,39435,43108,45857,55876,59552,60210,64199,69911,72211,72464,75217,83227,85446,87243,94344,98859,102720,110187,110416,120674,122848,125716,129352,179261,249546,
#Partially deleted in new
chr10	95311773	95561378	chr10:95311773-95561378	1	-	95315058	95441135	0	33	3353,113,59,774,195,126,115,47,168,86,173,50,102,66,84,115,130,48,63,75,64,173,30,145,369,113,27,129,96,66,55,86,59,	0,6546,10189,24747,27359,29511,29790,34632,39435,43108,45857,55876,59552,60210,64199,69911,72211,72464,82837,83227,85446,87243,94344,98859,102720,110187,110416,120674,122848,125716,129352,179261,249546,
#Partially deleted in new
chr10	95314734	95384108	chr10:95314734-95384108	0	-	95315058	95384108	789624	14	392,113,59,195,126,115,47,168,86,173,50,84,115,124,	0,3585,7228,24398,26550,26829,31671,36474,40147,42896,52915,61238,66950,69250,
#Partially deleted in new
chr10	95314736	95561355	chr10:95314736-95561355	1	-	95315058	95441135	0	27	390,113,59,195,126,115,47,168,86,1479,173,50,102,84,115,130,48,64,173,145,113,27,129,66,55,86,36,	0,3583,7226,24396,26548,26827,31669,36472,40145,40890,42894,52913,56589,61236,66948,69248,69501,82483,84280,95896,107224,107453,117711,122753,126389,176298,246583,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr10	95315024	95441162	chr10:95315024-95441162	1	-	95315058	95441135	0	31	102,113,59,285,195,126,115,47,168,86,173,50,102,66,84,115,130,48,129,75,64,173,30,145,369,113,27,129,96,66,37,	0,3295,6938,21496,24108,26260,26539,31381,36184,39857,42606,52625,56301,56959,60948,66660,68960,69213,71966,79976,82195,83992,91093,95608,99469,106936,107165,117423,119597,122465,126101,
#Partially deleted in new
chr10	95315024	95441162	chr10:95315024-95441162	1	-	95315058	95441135	0	31	102,113,59,774,195,126,115,47,168,86,173,50,102,66,84,115,130,48,63,75,64,173,30,145,369,113,27,129,96,66,37,	0,3295,6938,21496,24108,26260,26539,31381,36184,39857,42606,52625,56301,56959,60948,66660,68960,69213,79586,79976,82195,83992,91093,95608,99469,106936,107165,117423,119597,122465,126101,
#Partially deleted in new
chr10	95315024	95441162	chr10:95315024-95441162	1	-	95315058	95441135	0	28	102,113,59,60,195,126,115,47,168,86,173,50,66,84,115,130,48,64,173,30,145,162,113,27,129,96,66,37,	0,3295,6938,7721,24108,26260,26539,31381,36184,39857,42606,52625,56959,60948,66660,68960,69213,82195,83992,91093,95608,99469,106936,107165,117423,119597,122465,126101,
#Partially deleted in new
chr10	95315024	95322805	chr10:95315024-95322805	0	-	95315058	95322805	8553170	4	102,113,191,60,	0,3295,6938,7721,
#Partially deleted in new
chr10	95315024	95337294	chr10:95315024-95337294	0	-	95315058	95337294	8553170	4	102,113,191,774,	0,3295,6938,21496,
#Partially deleted in new
chr10	95315058	95441135	chr10:95315058-95441135	1	-	95315058	95441135	0	28	68,113,59,195,126,115,47,168,86,173,50,102,66,84,115,130,48,75,64,173,30,145,369,113,129,96,66,10,	0,3261,6904,24074,26226,26505,31347,36150,39823,42572,52591,56267,56925,60914,66626,68926,69179,79942,82161,83958,91059,95574,99435,106902,117389,119563,122431,126067,
#Partially deleted in new
chr10	95315058	95441135	chr10:95315058-95441135	1	-	95315058	95441135	0	25	68,113,59,195,126,115,47,168,86,173,50,102,84,115,130,48,64,173,30,145,113,27,129,66,10,	0,3261,6904,24074,26226,26505,31347,36150,39823,42572,52591,56267,60914,66626,68926,69179,82161,83958,91059,95574,106902,107131,117389,122431,126067,
#Partially deleted in new
chr10	95315058	95441135	chr10:95315058-95441135	3	-	95315058	95441135	0	21	68,113,59,195,126,115,47,86,173,50,115,130,48,64,173,30,145,113,129,66,10,	0,3261,6904,24074,26226,26505,31347,39823,42572,52591,66626,68926,69179,82161,83958,91059,95574,106902,117389,122431,126067,
#Partially deleted in new
chr10	95341583	95561373	chr10:95341583-95561373	0	-	95341583	95341583	8553170	21	95,47,161,86,173,50,115,130,48,64,173,30,145,369,717,113,129,66,55,86,54,	0,4822,9632,13298,16047,26066,40101,42401,42654,55636,57433,64534,69049,72910,73885,80377,90864,95906,99542,149451,219736,
#Partially deleted in new
chr10	95341673	95356046	chr10:95341673-95356046	0	-	95341673	95356046	789624	4	5,47,86,420,	0,4732,13208,13953,
#Partially deleted in new
chr10	95381412	95384285	chr10:95381412-95384285	0	-	95381412	95381412	8553170	3	387,130,48,	0,2572,2825,
#Partially deleted in new
chr10	95384050	95413764	chr10:95384050-95413764	0	-	95384050	95384050	8553170	7	64,48,64,173,30,145,212,	0,187,13169,14966,22067,26582,29502,
#Partially deleted in new
chr10	95399016	95422073	chr10:95399016-95422073	0	-	95399016	95422073	789624	5	173,30,145,717,113,	0,7101,11616,16452,22944,
#Partially deleted in new
chr10	95414743	95482671	chr10:95414743-95482671	0	-	95414743	95441135	789624	6	119,113,129,66,55,238,	0,7217,17704,22746,26382,67690,
#Deleted in new
chr10	95594597	95595372	chr10:95594597-95595372	7	+	95594597	95594597	16724991	1	775,	0,
#Partially deleted in new
chr10	95605928	95656706	chr10:95605928-95656706	3	-	95606761	95653377	0	18	1015,96,187,122,196,138,221,94,74,145,125,91,159,105,150,215,116,110,	0,4268,5327,7813,8037,10548,15102,19433,20774,21513,22439,27030,27562,31164,31358,37063,47361,50668,
#Partially deleted in new
chr10	95605944	95656706	chr10:95605944-95656706	1	-	95606761	95653377	0	18	999,96,187,122,196,138,221,94,74,145,125,91,153,105,150,215,116,110,	0,4252,5311,7797,8021,10532,15086,19417,20758,21497,22423,27014,27552,31148,31342,37047,47345,50652,
#Partially deleted in new
chr10	95611255	95616697	chr10:95611255-95616697	0	-	95611255	95611255	8553170	4	187,122,196,221,	0,2486,2710,5221,
#Deleted in new
chr10	95625429	95628853	chr10:95625429-95628853	0	-	95625429	95625429	8553170	5	26,74,145,125,173,	0,1273,2012,2938,3251,
#Partially deleted in new
chr10	95637092	95656609	chr10:95637092-95656609	0	-	95637092	95637092	8553170	5	105,150,215,116,164,	0,194,5899,16197,19353,
#Partially deleted in new
chr10	95663395	95694143	chr10:95663395-95694143	3	-	95664066	95693899	789624	14	905,138,154,95,108,126,81,36,116,109,128,119,124,500,	0,17076,19255,19705,20126,21103,22160,23099,23648,23851,24196,29524,29957,30248,
#Partially deleted in new
chr10	95663400	95694143	chr10:95663400-95694143	1	-	95664066	95693953	789624	14	900,138,154,95,108,126,81,36,116,109,128,119,124,500,	0,17071,19250,19700,20121,21098,22155,23094,23643,23846,24191,29519,29952,30243,
#Partially deleted in new
chr10	95663400	95693923	chr10:95663400-95693923	1	-	95664066	95693899	789624	14	900,138,154,95,108,126,81,36,116,109,128,119,124,280,	0,17071,19250,19700,20121,21098,22155,23094,23643,23846,24191,29519,29952,30243,
#Partially deleted in new
chr10	95663695	95693926	chr10:95663695-95693926	1	-	95664066	95693899	789624	10	605,138,154,95,108,36,116,119,124,283,	0,16776,18955,19405,19826,22799,23348,29224,29657,29948,
#Partially deleted in new
chr10	95683260	95693899	chr10:95683260-95693899	1	-	95683392	95693899	789624	10	369,126,81,36,116,109,128,119,124,256,	0,1238,2295,3234,3783,3986,4331,9659,10092,10383,
#Partially deleted in new
chr10	95687081	95693955	chr10:95687081-95693955	0	-	95687081	95687081	8553170	3	78,119,603,	0,5838,6271,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	95692863	95693901	chr10:95692863-95693901	0	-	95692863	95692863	8553170	3	175,124,258,	0,489,780,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	95711778	95869695	chr10:95711778-95869695	1	+	95711956	95866383	789624	10	215,128,118,151,160,240,261,114,138,3519,	0,111458,127912,130565,132697,133578,135667,148690,152945,154398,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	95753205	96090214	chr10:95753205-96090214	3	-	95753205	95753205	789624	6	3509,220,94,143,42,233,	0,31820,94186,123312,336060,336776,
#Partially deleted in new
chr10	95755651	95866654	chr10:95755651-95866654	1	+	95755714	95866383	789624	10	115,128,118,151,160,240,261,114,138,478,	0,67585,84039,86692,88824,89705,91794,104817,109072,110525,
#Partially deleted in new
chr10	95755746	95845488	chr10:95755746-95845488	0	+	95755746	95755746	8553170	5	20,128,118,160,132,	0,67490,83944,88729,89610,
#Partially deleted in new
chr10	95755751	95866558	chr10:95755751-95866558	1	+	95842405	95866383	789624	9	15,118,151,160,240,261,114,138,382,	0,83939,86592,88724,89605,91694,104717,108972,110425,
#Partially deleted in new
chr10	95755956	95866602	chr10:95755956-95866602	3	+	95756239	95866383	789624	10	299,128,118,151,160,240,261,114,138,426,	0,67280,83734,86387,88519,89400,91489,104512,108767,110220,
#Partially deleted in new
chr10	95756158	95847531	chr10:95756158-95847531	0	+	95842405	95845378	789624	6	97,118,151,81,240,86,	0,83532,86185,88396,89198,91287,
#Partially deleted in new
chr10	95756161	95866753	chr10:95756161-95866753	0	+	95756239	95845378	789624	9	94,128,118,160,240,261,114,138,577,	0,67075,83529,88314,89195,91284,104307,108562,110015,
#Partially deleted in new
chr10	95756178	95866696	chr10:95756178-95866696	0	+	95756239	95844487	789624	8	77,128,160,240,261,114,138,520,	0,67058,88297,89178,91267,104290,108545,109998,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	95823235	95846396	chr10:95823235-95846396	0	+	95823235	95823235	8553170	5	129,118,151,160,1040,	0,16455,19108,21240,22121,
#Partially deleted in new
chr10	95823237	95844847	chr10:95823237-95844847	0	+	95823237	95823237	8553170	4	127,118,151,372,	0,16453,19106,21238,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	95833507	95873758	chr10:95833507-95873758	3	+	95833507	95833507	8553170	2	260,327,	0,39924,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	95839289	95844553	chr10:95839289-95844553	0	+	95839289	95839289	8553170	5	178,118,151,103,78,	0,401,3054,3909,5186,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	95839299	95842413	chr10:95839299-95842413	0	+	95839299	95839299	8553170	2	509,70,	0,3044,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	95844574	95846220	chr10:95844574-95846220	0	+	95844574	95844574	8553170	3	61,240,138,	0,782,1508,
#Partially deleted in new
chr10	95860547	95924844	chr10:95860547-95924844	3	+	95860547	95911327	789624	7	35,138,59,56,61,77,66,	0,4176,50753,52834,61468,63766,64231,
#Partially deleted in new
chr10	95861312	96090155	chr10:95861312-96090155	0	-	95861312	95861312	8553170	4	357,143,42,174,	0,15205,227953,228669,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	95875083	95907775	chr10:95875083-95907775	0	-	95875083	95875083	8553170	4	583,143,109,113,	0,1434,29746,32579,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	95875281	95907882	chr10:95875281-95907882	1	-	95875281	95875281	8553170	5	385,143,122,109,105,	0,1236,22276,29548,32496,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	95875387	96090198	chr10:95875387-96090198	1	-	95875387	95875387	8553170	6	279,143,106,71,42,217,	0,1130,29442,75070,213878,214594,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	95875525	95907863	chr10:95875525-95907863	0	-	95875525	95875525	8553170	4	141,143,106,201,	0,992,29304,32137,
#Partially deleted in new
chr10	95904655	95907883	chr10:95904655-95907883	0	-	95904655	95904655	8553170	2	283,106,	0,3122,
#Partially deleted in new
chr10	95907602	95924812	chr10:95907602-95924812	0	+	95913425	95924812	789624	6	159,59,56,61,77,34,	0,3698,5779,14413,16711,17176,
#Partially deleted in new
chr10	95907964	95938723	chr10:95907964-95938723	1	+	95913425	95938209	789624	8	93,59,56,61,77,66,96,733,	0,3336,5417,14051,16349,16814,19272,30026,
#Partially deleted in new
chr10	95911253	96032008	chr10:95911253-96032008	1	+	95911323	96032008	789624	25	106,61,65,66,84,199,137,129,210,98,141,103,113,139,204,92,171,97,183,198,90,114,135,123,189,	0,10762,13072,13525,15995,26737,27315,27543,38642,44140,50575,54642,54936,70721,72352,80116,81273,92898,100931,101278,102534,104947,107949,108448,120566,
#Partially deleted in new
chr10	95911253	96032008	chr10:95911253-96032008	3	+	95911323	96032008	789624	34	106,61,65,66,84,199,137,129,210,98,141,103,113,178,151,148,139,204,93,92,171,97,110,97,99,183,198,90,114,135,123,59,178,189,	0,10762,13072,13525,15995,26737,27315,27543,38642,44140,50575,54642,54936,57470,60812,62755,70721,72352,76996,80116,81273,84015,84889,92898,98571,100931,101278,102534,104947,107949,108448,113599,115958,120566,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	95918937	96090212	chr10:95918937-96090212	1	-	95918937	95918937	8553170	3	2660,42,231,	0,170328,171044,
#Partially deleted in new
chr10	95922003	95938658	chr10:95922003-95938658	1	+	95922003	95938209	789624	5	73,77,66,96,668,	0,2310,2775,5233,15987,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	95949967	95984695	chr10:95949967-95984695	0	+	95949967	95952328	789624	12	138,103,98,141,103,113,178,151,148,139,204,99,	0,2355,5426,11861,15928,16222,18756,22098,24041,32007,33638,34629,
#Partially deleted in new
chr10	95961573	95965953	chr10:95961573-95965953	0	+	95961573	95961573	8553170	2	396,58,	0,4322,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	95974028	96032675	chr10:95974028-96032675	0	+	95974028	95984644	789624	14	128,139,204,99,93,92,171,104,97,110,97,99,178,856,	0,7946,9577,10568,14221,17341,18498,18980,21240,22114,30123,35796,53183,57791,
#Deleted in new
chr10	95999777	96000243	chr10:95999777-96000243	7	-	95999777	95999777	16724991	1	466,	0,
#Partially deleted in new
chr10	96000090	96013872	chr10:96000090-96013872	0	+	96004227	96013872	789624	7	123,33,97,99,183,198,85,	0,704,4061,9734,12094,12441,13697,
#Partially deleted in new
chr10	96000111	96032383	chr10:96000111-96032383	1	+	96004227	96032008	789624	12	102,33,97,99,198,90,114,135,123,59,178,564,	0,683,4040,9713,12420,13676,16089,19091,19590,24741,27100,31708,
#Partially deleted in new
chr10	96000125	96032684	chr10:96000125-96032684	1	+	96004227	96032008	789624	9	88,97,99,198,90,114,135,123,865,	0,4026,9699,12406,13662,16075,19077,19576,31694,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	96018719	96090225	chr10:96018719-96090225	1	-	96018719	96018719	789624	4	2849,139,42,244,	0,8487,70546,71262,
#Partially deleted in new
chr10	96021277	96042845	chr10:96021277-96042845	1	-	96021277	96021277	8553170	3	291,171,61,	0,1266,21507,
#Partially deleted in new
chr10	96042477	96090238	chr10:96042477-96090238	0	-	96042477	96042477	8553170	3	450,42,257,	0,46788,47504,
#Partially deleted in new
chr10	96043393	96060870	chr10:96043393-96060870	1	+	96044393	96058241	789624	6	326,110,211,300,127,3041,	0,959,6862,13307,13727,14436,
#Partially deleted in new
chr10	96043393	96059588	chr10:96043393-96059588	1	+	96044393	96058241	789624	6	326,110,211,300,124,1759,	0,959,6862,13307,13730,14436,
#Partially deleted in new
chr10	96043582	96059588	chr10:96043582-96059588	3	+	96044393	96058241	789624	6	137,110,211,300,160,1759,	0,770,6673,13118,13505,14247,
#Deleted in new
chr10	96064314	96064399	chr10:96064314-96064399	3	-	96064314	96064314	5263520	1	85,	0,
#Deleted in new
chr10	96088908	96090199	chr10:96088908-96090199	0	-	96088908	96088908	8553170	2	399,218,	0,1073,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	96112746	96112851	chr10:96112746-96112851	3	+	96112746	96112746	8553170	1	105,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	96129714	96162742	chr10:96129714-96162742	1	+	96156322	96160774	789624	6	278,85,93,151,124,6546,	0,2871,3841,21701,26209,26482,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	96129734	96156019	chr10:96129734-96156019	0	+	96129734	96129734	8553170	6	258,85,66,151,73,96,	0,2851,3848,21681,25591,26189,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	96130055	96157337	chr10:96130055-96157337	0	+	96156322	96157337	789624	6	63,85,93,73,124,1141,	0,2530,3500,25270,25868,26141,
#Partially deleted in new
chr10	96130055	96151566	chr10:96130055-96151566	0	+	96130055	96130055	8553170	5	63,85,66,120,151,	0,2530,3527,5114,21360,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	96130055	96163752	chr10:96130055-96163752	3	+	96156322	96160774	789624	6	63,85,93,73,124,7556,	0,2530,3500,25270,25868,26141,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	96130071	96205288	chr10:96130071-96205288	0	+	96130071	96130071	8553170	4	47,85,93,1369,	0,2514,3484,73848,
#Deleted in new
chr10	96130678	96132909	chr10:96130678-96132909	0	+	96130678	96130678	8553170	2	144,324,	0,1907,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	96151408	96163752	chr10:96151408-96163752	1	+	96156322	96160774	789624	4	158,73,124,7556,	0,3917,4515,4788,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	96155342	96163761	chr10:96155342-96163761	0	+	96155342	96155342	8553170	2	705,7565,	0,854,
#Partially deleted in new
chr10	96156012	96204129	chr10:96156012-96204129	0	+	96156012	96156012	8553170	3	35,55,210,	0,47561,47907,
#Partially deleted in new
chr10	96189365	96190219	chr10:96189365-96190219	7	-	96189365	96189365	16724991	1	854,	0,
#Partially deleted in new
chr10	96191701	96271540	chr10:96191701-96271540	3	-	96191972	96271398	789624	17	391,156,84,77,32,85,43,28,70,69,82,164,157,41,50,66,189,	0,5206,8373,9280,12355,12830,15309,16170,18136,23619,24951,32124,35708,39092,51033,55282,79650,
#Partially deleted in new
chr10	96191701	96271540	chr10:96191701-96271540	1	-	96191972	96271398	789624	16	391,156,84,77,32,85,43,28,70,82,164,157,41,50,66,189,	0,5206,8373,9280,12355,12830,15309,16170,18136,24951,32124,35708,39092,51033,55282,79650,
#Partially deleted in new
chr10	96191706	96271516	chr10:96191706-96271516	1	-	96191972	96271398	789624	16	386,84,77,32,85,43,28,70,69,82,164,157,41,50,66,165,	0,8368,9275,12350,12825,15304,16165,18131,23614,24946,32119,35703,39087,51028,55277,79645,
#Partially deleted in new
chr10	96191706	96271516	chr10:96191706-96271516	1	-	96191972	96271398	789624	14	386,84,77,32,85,43,28,70,12,145,41,50,66,165,	0,8368,9275,12350,12825,15304,16165,18131,23614,35715,39087,51028,55277,79645,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	96199965	96204854	chr10:96199965-96204854	0	-	96199965	96199965	8553170	4	193,77,32,323,	0,1016,4091,4566,
#Partially deleted in new
chr10	96204531	96271587	chr10:96204531-96271587	0	-	96216729	96271398	789624	11	85,43,28,70,69,82,157,41,50,66,236,	0,2479,3340,5306,10789,12121,22878,26262,38203,42452,66820,
#Partially deleted in new
chr10	96204596	96210303	chr10:96204596-96210303	0	-	96204596	96204596	8553170	4	20,43,28,466,	0,2414,3275,5241,
#Partially deleted in new
chr10	96215848	96227497	chr10:96215848-96227497	0	-	96215848	96215848	8553170	3	886,164,88,	0,7977,11561,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	96238887	96271398	chr10:96238887-96271398	1	-	96239129	96271398	789624	4	277,50,66,47,	0,3847,8096,32464,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	96292684	96306695	chr10:96292684-96306695	3	-	96292684	96292684	8553170	4	1564,86,87,187,	0,2197,7578,13824,
#Partially deleted in new
chr10	96304395	96338564	chr10:96304395-96338564	3	+	96304497	96338224	0	11	305,175,129,171,72,124,133,106,246,84,427,	0,13956,14866,16222,18261,19870,23072,24329,27955,31495,33742,
#Partially deleted in new
chr10	96304408	96338562	chr10:96304408-96338562	1	+	96304497	96338224	0	11	292,175,129,171,72,124,133,106,246,81,425,	0,13943,14853,16209,18248,19857,23059,24316,27942,31485,33729,
#Partially deleted in new
chr10	96343215	96359302	chr10:96343215-96359302	3	-	96345940	96358896	789624	6	2902,57,120,33,36,409,	0,5073,6491,8162,12039,15678,
#Partially deleted in new
chr10	96343221	96359365	chr10:96343221-96359365	1	-	96345940	96358896	789624	5	2896,57,120,33,472,	0,5067,6485,8156,15672,
#Partially deleted in new
chr10	96343221	96359365	chr10:96343221-96359365	1	-	96345940	96358896	789624	4	2896,57,120,472,	0,5067,6485,15672,
#Partially deleted in new
chr10	96343221	96359365	chr10:96343221-96359365	1	-	96345940	96358896	789624	5	2896,57,120,36,472,	0,5067,6485,12033,15672,
#Partially deleted in new
chr10	96343221	96357159	chr10:96343221-96357159	1	-	96345940	96349712	789624	6	2896,57,120,33,36,250,	0,5067,6485,8156,12033,13688,
#Partially deleted in new
chr10	96343221	96353455	chr10:96343221-96353455	1	-	96345940	96353455	789624	5	2896,57,120,33,9,	0,5067,6485,8156,10225,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr10	96364605	96513911	chr10:96364605-96513911	3	-	96368087	96513685	789624	21	3617,251,214,128,126,181,161,126,196,146,117,103,116,125,106,179,118,156,78,111,401,	0,5459,8990,12086,14361,19981,21449,22347,30581,31269,32580,40626,45753,48586,56350,57943,64025,68201,81485,115743,148905,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	96373112	96375361	chr10:96373112-96375361	0	-	96373112	96373112	8553170	2	1459,53,	0,2196,
#Partially deleted in new
chr10	96395192	96513918	chr10:96395192-96513918	0	-	96395192	96395192	8553170	13	190,146,117,103,116,90,125,106,179,118,78,111,408,	0,682,1993,10039,15166,15370,17999,25763,27356,33438,50898,85156,118318,
#Partially deleted in new
chr10	96518108	96587052	chr10:96518108-96587052	3	-	96522262	96586835	789624	15	4222,77,84,147,69,140,131,95,167,132,78,161,123,196,319,	0,9104,9304,9922,12431,14942,25967,29786,33136,34819,41550,43869,47195,58525,68625,
#Partially deleted in new
chr10	96518120	96586594	chr10:96518120-96586594	0	-	96518120	96518120	8553170	15	4210,77,84,147,69,140,131,95,167,132,78,161,123,196,440,	0,9092,9292,9910,12419,14930,25955,29774,33124,34807,41538,43857,47183,58513,68034,
#Partially deleted in new
chr10	96522276	96528173	chr10:96522276-96528173	0	-	96522276	96522276	8553170	4	54,77,133,143,	0,4936,5136,5754,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	96543600	96552943	chr10:96543600-96552943	0	-	96543600	96543600	8553170	4	606,95,167,16,	0,4294,7644,9327,
#Partially deleted in new
chr10	96551310	96587452	chr10:96551310-96587452	0	-	96551310	96576799	789624	7	101,132,78,161,123,196,77,	0,1617,8348,10667,13993,25323,36065,
#Partially deleted in new
chr10	96553023	96577542	chr10:96553023-96577542	0	-	96553023	96553023	8553170	6	36,78,161,123,196,64,	0,6635,8954,12280,23610,24455,
#Deleted in new
chr10	96560184	96560922	chr10:96560184-96560922	7	+	96560184	96560184	16724991	1	738,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	96576344	96586759	chr10:96576344-96586759	0	-	96576344	96576344	8553170	2	485,26,	0,10389,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr10	96593311	96720514	chr10:96593311-96720514	3	-	96595576	96720394	0	17	2323,119,71,156,73,206,66,198,96,190,197,133,143,145,137,417,133,	0,8968,10667,16400,23327,27040,30160,33396,35086,52161,55347,57936,58197,59386,63486,116255,127070,
#Partially deleted in new
chr10	96595564	96618788	chr10:96595564-96618788	0	-	96595564	96595564	8553170	6	70,119,71,156,73,138,	0,6715,8414,14147,21074,23086,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	96603739	96620411	chr10:96603739-96620411	0	-	96603739	96603739	8553170	4	310,156,73,60,	0,5972,12899,16612,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	96619375	96619483	chr10:96619375-96619483	7	+	96619375	96619375	16724991	1	108,	0,
#Deleted in new
chr10	96620876	96621707	chr10:96620876-96621707	7	-	96620876	96620876	16724991	1	831,	0,
#Partially deleted in new
chr10	96628397	96700878	chr10:96628397-96700878	0	-	96628397	96628397	8553170	8	96,190,197,133,143,145,137,76,	0,17075,20261,22850,23111,24300,28400,72405,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	96743166	96743273	chr10:96743166-96743273	3	+	96743166	96743166	8553170	1	107,	0,
#Partially deleted in new
chr10	96750287	96750899	chr10:96750287-96750899	7	+	96750287	96750287	16724991	1	612,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	96828668	96828764	chr10:96828668-96828764	3	-	96828668	96828668	5263520	1	96,	0,
#Partially deleted in new
chr10	96832281	96964441	chr10:96832281-96964441	1	+	96949057	96955922	0	8	118,74,66,80,133,288,94,9489,	0,1124,74983,75386,111831,116726,119821,122671,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	96832297	96995959	chr10:96832297-96995959	3	+	96949057	96985134	0	8	102,74,66,80,133,288,94,15167,	0,1108,74967,75370,111815,116710,119805,148495,
#Partially deleted in new
chr10	96832318	96958926	chr10:96832318-96958926	1	+	96949057	96958418	0	9	81,74,66,80,133,288,94,882,515,	0,1087,74946,75349,111794,116689,119784,122634,126093,
#Partially deleted in new
chr10	96832954	96958891	chr10:96832954-96958891	1	+	96949057	96955922	0	8	160,74,66,80,133,288,94,3939,	0,451,74310,74713,111158,116053,119148,121998,
#Partially deleted in new
chr10	96832979	96958926	chr10:96832979-96958926	1	+	96949057	96955922	0	8	143,74,66,80,133,288,94,3974,	0,426,74285,74688,111133,116028,119123,121973,
#Partially deleted in new
chr10	96907284	96949126	chr10:96907284-96949126	0	+	96907284	96907284	8553170	3	46,80,119,	0,383,41723,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	96907285	96908090	chr10:96907285-96908090	0	+	96907285	96907285	8553170	2	45,423,	0,382,
#Deleted in new
chr10	96915632	96915902	chr10:96915632-96915902	7	-	96915632	96915632	16724991	1	270,	0,
#Partially deleted in new
chr10	96949222	96958515	chr10:96949222-96958515	0	+	96949222	96949222	8553170	3	73,94,104,	0,2880,9189,
#Deleted in new
chr10	96981283	96985825	chr10:96981283-96985825	1	+	96981390	96985134	789624	1	4542,	0,
#Partially deleted in new
chr10	96998037	97185920	chr10:96998037-97185920	3	-	97001111	97185674	789624	37	3313,212,289,155,131,238,138,94,140,98,125,164,72,72,72,69,133,167,144,144,75,145,24,164,144,72,72,72,148,164,72,72,72,72,72,72,443,	0,4120,4666,6030,6655,8445,12955,15703,15981,20548,20945,23212,32719,33568,36433,39660,41950,44863,45332,48616,48953,49652,49935,50917,58283,59172,61422,62049,62602,65417,66130,66767,67977,159780,165342,166781,187440,
#Deleted in new
chr10	96998119	96999666	chr10:96998119-96999666	0	-	96998119	96998119	8553170	4	100,133,236,21,	0,228,450,1526,
#Partially deleted in new
chr10	97001112	97185758	chr10:97001112-97185758	1	-	97001206	97185674	789624	37	238,88,289,155,131,238,138,94,140,98,125,164,72,72,72,69,133,167,144,144,75,145,24,164,144,72,72,72,148,164,72,72,72,72,72,72,281,	0,1169,1591,2955,3580,5370,9880,12628,12906,17473,17870,20137,29644,30493,33358,36585,38875,41788,42257,45541,45878,46577,46860,47842,55208,56097,58347,58974,59527,62342,63055,63692,64902,156705,162267,163706,184365,
#Partially deleted in new
chr10	97037697	97185623	chr10:97037697-97185623	0	-	97037697	97185623	789624	22	69,133,167,144,144,75,145,24,164,144,72,102,72,148,164,72,72,72,72,72,72,146,	0,2290,5203,5672,8956,9293,9992,10275,11257,18623,19512,21762,22389,22942,25757,26470,27107,28317,120120,125682,127121,147780,
#Partially deleted in new
chr10	97057741	97185920	chr10:97057741-97185920	1	-	97057960	97185674	789624	12	364,72,72,148,164,72,72,72,72,72,72,443,	0,1718,2345,2898,5713,6426,7063,8273,100076,105638,107077,127736,
#Deleted in new
chr10	97102755	97103747	chr10:97102755-97103747	3	+	97102755	97102755	789624	3	355,172,162,	0,564,830,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	97153044	97155433	chr10:97153044-97155433	0	-	97153044	97153044	8553170	1	2389,	0,
#Partially deleted in new
chr10	97153045	97292637	chr10:97153045-97292637	3	-	97163443	97292627	789624	15	176,72,72,72,79,111,99,192,66,87,227,210,81,266,66,	0,4772,10334,11773,76101,76718,82171,90922,93226,103272,106356,110374,111780,112814,139526,
#Partially deleted in new
chr10	97157333	97185853	chr10:97157333-97185853	0	-	97157333	97157333	8553170	5	356,72,72,72,376,	0,484,6046,7485,28144,
#Partially deleted in new
chr10	97222172	97292656	chr10:97222172-97292656	3	-	97226121	97292627	789624	12	3960,79,111,99,192,66,87,227,210,81,266,85,	0,6974,7591,13044,21795,24099,34145,37229,41247,42653,43687,70399,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	97222172	97292623	chr10:97222172-97292623	0	-	97258688	97292623	789624	13	3960,79,111,99,192,66,87,95,227,210,81,266,52,	0,6974,7591,13044,21795,24099,34145,36487,37229,41247,42653,43687,70399,
#Partially deleted in new
chr10	97222175	97292673	chr10:97222175-97292673	1	-	97226121	97292627	789624	11	3957,79,111,99,192,66,227,210,81,266,102,	0,6971,7588,13041,21792,24096,37226,41244,42650,43684,70396,
#Partially deleted in new
chr10	97222179	97256515	chr10:97222179-97256515	0	-	97222179	97222179	8553170	7	3953,79,111,99,192,66,53,	0,6967,7584,13037,21788,24092,34283,
#Partially deleted in new
chr10	97225308	97270664	chr10:97225308-97270664	1	-	97226121	97270634	789624	12	824,79,111,99,192,66,87,227,210,81,266,59,	0,3838,4455,9908,18659,20963,31009,34093,38111,39517,40551,45297,
#Partially deleted in new
chr10	97259429	97292635	chr10:97259429-97292635	0	-	97259429	97292627	789624	5	199,210,81,47,64,	0,3990,5396,6649,33142,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	97265379	97292637	chr10:97265379-97292637	0	-	97265379	97265379	8553170	2	746,66,	0,27192,
#Partially deleted in new
chr10	97275011	97278097	chr10:97275011-97278097	7	+	97275011	97275011	16724991	3	96,119,150,	0,2627,2936,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	97297289	97297557	chr10:97297289-97297557	3	+	97297289	97297289	8553170	1	268,	0,
#Partially deleted in new
chr10	97309137	97309958	chr10:97309137-97309958	7	-	97309137	97309137	16724991	2	95,401,	0,420,
#Deleted in new
chr10	97319266	97321915	chr10:97319266-97321915	3	+	97319453	97320293	0	1	2649,	0,
#Deleted in new
chr10	97320740	97321823	chr10:97320740-97321823	0	+	97320740	97320740	8553170	2	494,139,	0,944,
#Partially deleted in new
chr10	97332496	97334709	chr10:97332496-97334709	3	-	97333870	97334572	789624	1	2213,	0,
#Partially deleted in new
chr10	97334563	97343203	chr10:97334563-97343203	3	+	97334563	97334563	8553170	2	408,397,	0,8243,
#Partially deleted in new
chr10	97356357	97367376	chr10:97356357-97367376	0	-	97356357	97356357	8553170	9	839,83,68,73,50,126,176,168,336,	0,2179,2585,4188,7496,9750,10088,10384,10683,
#Partially deleted in new
chr10	97356700	97373593	chr10:97356700-97373593	0	-	97356700	97356700	8553170	17	496,83,68,73,50,126,176,168,92,158,108,106,81,1244,68,155,19,	0,1836,2242,3845,7153,9407,9745,10041,10340,12724,13466,13754,14015,14222,16035,16345,16874,
#Partially deleted in new
chr10	97356700	97426074	chr10:97356700-97426074	3	-	97357093	97401231	789624	35	496,83,68,73,50,126,176,168,92,158,108,106,81,159,94,68,155,163,65,122,143,115,98,112,92,99,128,136,117,106,77,84,230,276,52,	0,1836,2242,3845,7153,9407,9745,10041,10340,12724,13466,13754,14015,14222,15372,16035,16345,16874,17129,22592,22927,24098,24685,25014,28465,29194,31551,31788,33722,34038,36983,39517,43604,44392,69322,
#Partially deleted in new
chr10	97356701	97401283	chr10:97356701-97401283	1	-	97357093	97401231	789624	31	495,83,68,73,50,126,176,168,92,158,108,106,81,159,94,68,155,163,65,122,143,115,98,112,92,99,128,136,84,230,191,	0,1835,2241,3844,7152,9406,9744,10040,10339,12723,13465,13753,14014,14221,15371,16034,16344,16873,17128,22591,22926,24097,24684,25013,28464,29193,31550,31787,39516,43603,44391,
#Partially deleted in new
chr10	97356701	97401370	chr10:97356701-97401370	1	-	97357093	97401231	789624	34	495,83,68,73,50,126,176,168,92,158,108,106,81,159,94,68,155,163,65,122,143,115,98,112,92,99,128,136,117,106,77,84,230,278,	0,1835,2241,3844,7152,9406,9744,10040,10339,12723,13465,13753,14014,14221,15371,16034,16344,16873,17128,22591,22926,24097,24684,25013,28464,29193,31550,31787,33721,34037,36982,39516,43603,44391,
#Partially deleted in new
chr10	97356701	97401370	chr10:97356701-97401370	1	-	97357093	97401231	789624	32	495,83,68,73,50,126,176,168,92,158,108,106,81,159,94,68,155,163,65,122,143,115,98,112,92,99,128,136,117,84,230,278,	0,1835,2241,3844,7152,9406,9744,10040,10339,12723,13465,13753,14014,14221,15371,16034,16344,16873,17128,22591,22926,24097,24684,25013,28464,29193,31550,31787,33721,39516,43603,44391,
#Partially deleted in new
chr10	97357105	97363867	chr10:97357105-97363867	0	-	97357105	97357105	8553170	4	91,474,73,14,	0,1431,3440,6748,
#Deleted in new
chr10	97365889	97366560	chr10:97365889-97366560	0	-	97366027	97366560	789624	2	344,115,	0,556,
#Partially deleted in new
chr10	97373060	97380837	chr10:97373060-97380837	0	-	97373060	97373060	8553170	5	140,163,65,122,39,	0,514,769,6232,7738,
#Deleted in new
chr10	97387996	97388516	chr10:97387996-97388516	0	-	97387996	97387996	8553170	2	383,28,	0,492,
#Deleted in new
chr10	97393196	97393547	chr10:97393196-97393547	7	-	97393196	97393196	16724991	1	351,	0,
#Partially deleted in new
chr10	97393683	97401534	chr10:97393683-97401534	0	-	97393683	97401231	789624	4	77,84,230,442,	0,2534,6621,7409,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	97400480	97426076	chr10:97400480-97426076	0	-	97400480	97401231	789624	5	54,276,95,66,54,	0,612,24318,25193,25542,
#Partially deleted in new
chr10	97401114	97419524	chr10:97401114-97419524	3	+	97401114	97401114	8553170	2	259,289,	0,18121,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	97401133	97426074	chr10:97401133-97426074	0	-	97401133	97401231	789624	4	235,58,198,52,	0,8390,8528,24889,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	97418792	97426046	chr10:97418792-97426046	0	-	97418792	97418792	8553170	4	703,93,66,24,	0,6008,6881,7230,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	97421194	97421307	chr10:97421194-97421307	3	-	97421194	97421194	8553170	1	113,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	97423887	97426074	chr10:97423887-97426074	0	-	97423887	97423887	8553170	3	391,66,52,	0,1786,2135,
#Partially deleted in new
chr10	97426159	97433441	chr10:97426159-97433441	3	+	97426307	97432524	0	4	287,275,181,1087,	0,4219,4795,6195,
#Partially deleted in new
chr10	97426292	97427443	chr10:97426292-97427443	0	+	97426292	97426292	8553170	2	154,343,	0,808,
#Partially deleted in new
chr10	97427533	97432690	chr10:97427533-97432690	0	+	97427533	97427533	8553170	4	395,275,181,336,	0,2845,3421,4821,
#Partially deleted in new
chr10	97436141	97446017	chr10:97436141-97446017	3	-	97436444	97445985	0	8	410,85,51,34,89,75,116,63,	0,1049,1558,2528,5029,7095,9590,9813,
#Partially deleted in new
chr10	97436243	97445988	chr10:97436243-97445988	1	-	97436444	97445985	789624	7	308,85,34,89,75,116,34,	0,947,2426,4927,6993,9488,9711,
#Partially deleted in new
chr10	97436247	97445993	chr10:97436247-97445993	1	-	97436444	97445985	789624	7	304,85,51,34,89,116,39,	0,943,1452,2422,4923,9484,9707,
#Partially deleted in new
chr10	97436332	97445985	chr10:97436332-97445985	1	-	97436476	97445985	789624	6	219,34,89,75,116,31,	0,2337,4838,6904,9399,9622,
#Partially deleted in new
chr10	97436395	97445850	chr10:97436395-97445850	0	-	97436444	97445850	789624	5	156,41,89,75,119,	0,2267,4775,6841,9336,
#Partially deleted in new
chr10	97436405	97446017	chr10:97436405-97446017	0	-	97436444	97446017	789624	6	146,85,51,75,116,63,	0,785,1294,6831,9326,9549,
#Partially deleted in new
chr10	97436539	97445973	chr10:97436539-97445973	0	-	97436539	97436539	8553170	9	12,85,51,41,89,75,154,116,19,	0,651,1160,2123,4631,6697,8913,9192,9415,
#Partially deleted in new
chr10	97437259	97445910	chr10:97437259-97445910	0	-	97437259	97437259	8553170	6	16,51,41,89,75,179,	0,440,1403,3911,5977,8472,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	97440763	97446006	chr10:97440763-97446006	0	-	97440763	97440763	8553170	4	496,75,116,52,	0,2473,4968,5191,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	97443786	97446006	chr10:97443786-97446006	0	-	97443786	97443786	8553170	2	2061,52,	0,2168,
#Deleted in new
chr10	97444221	97445833	chr10:97444221-97445833	0	-	97444221	97444221	8553170	3	34,124,102,	0,532,1510,
#Partially deleted in new
chr10	97446130	97457363	chr10:97446130-97457363	3	+	97451675	97456891	789624	12	223,180,248,195,89,29,134,48,86,124,71,587,	0,4226,5540,5959,6284,6764,7399,7668,8583,9529,9843,10646,
#Partially deleted in new
chr10	97446169	97457366	chr10:97446169-97457366	1	+	97451675	97456891	789624	11	184,248,195,89,29,134,48,86,124,71,590,	0,5501,5920,6245,6725,7360,7629,8544,9490,9804,10607,
#Partially deleted in new
chr10	97446190	97453614	chr10:97446190-97453614	0	+	97451675	97453614	789624	7	163,180,248,195,89,29,85,	0,4166,5480,5899,6224,6704,7339,
#Partially deleted in new
chr10	97446194	97456924	chr10:97446194-97456924	0	+	97446194	97446194	789624	9	159,89,29,134,48,86,70,71,148,	0,6220,6700,7335,7604,8519,9519,9779,10582,
#Partially deleted in new
chr10	97446195	97456985	chr10:97446195-97456985	0	+	97446195	97446195	8553170	9	158,89,29,134,48,86,124,71,209,	0,6219,6699,7334,7603,8518,9464,9778,10581,
#Partially deleted in new
chr10	97446196	97457085	chr10:97446196-97457085	1	+	97451675	97456891	789624	8	157,248,195,89,29,182,71,309,	0,5474,5893,6218,6698,9405,9777,10580,
#Partially deleted in new
chr10	97446201	97457366	chr10:97446201-97457366	1	+	97451675	97456891	789624	10	152,248,195,89,29,134,86,124,71,590,	0,5469,5888,6213,6693,7328,8512,9458,9772,10575,
#Partially deleted in new
chr10	97446203	97457366	chr10:97446203-97457366	1	+	97451675	97456891	789624	10	150,248,195,89,46,48,86,124,71,590,	0,5467,5886,6211,7414,7595,8510,9456,9770,10573,
#Partially deleted in new
chr10	97446203	97457366	chr10:97446203-97457366	1	+	97451675	97456891	789624	11	150,161,248,195,89,29,134,86,124,71,590,	0,1986,5467,5886,6211,6691,7326,8510,9456,9770,10573,
#Partially deleted in new
chr10	97446209	97457370	chr10:97446209-97457370	1	+	97451675	97456891	789624	9	144,248,89,29,134,86,124,71,594,	0,5461,6205,6685,7320,8504,9450,9764,10567,
#Partially deleted in new
chr10	97446211	97456018	chr10:97446211-97456018	0	+	97446211	97446211	8553170	7	142,248,195,89,117,182,45,	0,5459,5878,6203,6595,9390,9762,
#Partially deleted in new
chr10	97450380	97455757	chr10:97450380-97455757	0	+	97451675	97455757	789624	8	156,248,89,29,134,48,86,98,	0,1290,2034,2514,3149,3418,4333,5279,
#Deleted in new
chr10	97450827	97452465	chr10:97450827-97452465	0	+	97450827	97450827	8553170	4	366,248,195,51,	0,843,1262,1587,
#Partially deleted in new
chr10	97451735	97457361	chr10:97451735-97457361	0	+	97451735	97451735	8553170	10	183,195,89,117,134,48,86,124,71,585,	0,354,679,1071,1794,2063,2978,3924,4238,5041,
#Partially deleted in new
chr10	97451748	97457294	chr10:97451748-97457294	0	+	97451748	97456891	789624	9	170,195,89,29,134,86,70,71,518,	0,341,666,1146,1781,2965,3965,4225,5028,
#Partially deleted in new
chr10	97451850	97457311	chr10:97451850-97457311	0	+	97451850	97456891	789624	10	68,195,89,29,134,48,86,70,71,535,	0,239,564,1044,1679,1948,2863,3863,4123,4926,
#Partially deleted in new
chr10	97453553	97457249	chr10:97453553-97457249	0	+	97453553	97453553	8553170	5	110,86,145,71,473,	0,1160,2085,2420,3223,
#Deleted in new
chr10	97455716	97456428	chr10:97455716-97456428	0	+	97455716	97455716	8553170	2	67,455,	0,257,
#Partially deleted in new
chr10	97458323	97498758	chr10:97458323-97498758	3	-	97458691	97498384	789624	32	396,101,60,165,83,187,57,101,127,69,103,100,156,150,101,82,126,79,155,139,78,75,87,62,129,70,75,86,101,49,120,63,	0,476,899,1038,1335,1722,2371,2583,3172,3504,3693,4259,5534,7481,7735,8180,8452,9181,9928,10642,11322,11805,12451,18359,18511,19023,19531,19980,22618,25779,39949,40372,
#Partially deleted in new
chr10	97458323	97498388	chr10:97458323-97498388	0	-	97481031	97498384	789624	30	396,101,60,165,83,187,57,101,127,69,103,100,156,150,98,82,126,79,155,139,78,75,87,62,129,58,75,86,101,116,	0,476,899,1038,1335,1722,2371,2583,3172,3504,3693,4259,5534,7481,7735,8180,8452,9181,9928,10642,11322,11805,12451,18359,18511,19023,19531,19980,22618,39949,
#Partially deleted in new
chr10	97458323	97467525	chr10:97458323-97467525	0	-	97458691	97467525	789624	18	396,101,60,144,83,187,57,101,127,69,103,100,156,150,101,82,126,21,	0,476,899,1038,1335,1722,2371,2583,3172,3504,3693,4259,5534,7481,7735,8180,8452,9181,
#Partially deleted in new
chr10	97458323	97498720	chr10:97458323-97498720	1	-	97458691	97498384	789624	31	396,101,60,165,83,187,57,101,127,69,103,100,156,150,101,82,126,79,155,139,78,75,87,62,129,70,75,86,101,49,448,	0,476,899,1038,1335,1722,2371,2583,3172,3504,3693,4259,5534,7481,7735,8180,8452,9181,9928,10642,11322,11805,12451,18359,18511,19023,19531,19980,22618,25779,39949,
#Deleted in new
chr10	97458323	97459741	chr10:97458323-97459741	0	-	97458691	97459741	789624	4	396,101,60,83,	0,476,899,1335,
#Partially deleted in new
chr10	97458323	97463982	chr10:97458323-97463982	0	-	97458323	97458323	8553170	12	396,101,60,165,83,187,57,101,401,103,100,125,	0,476,899,1038,1335,1722,2371,2583,3172,3693,4259,5534,
#Partially deleted in new
chr10	97458325	97498384	chr10:97458325-97498384	1	-	97458691	97498384	789624	29	394,101,60,165,83,187,57,101,127,69,103,100,156,150,101,82,126,79,78,75,87,62,129,70,75,86,101,49,112,	0,474,897,1036,1333,1720,2369,2581,3170,3502,3691,4257,5532,7479,7733,8178,8450,9179,11320,11803,12449,18357,18509,19021,19529,19978,22616,25777,39947,
#Partially deleted in new
chr10	97458325	97498609	chr10:97458325-97498609	1	-	97458691	97498384	789624	30	394,101,60,165,83,187,57,101,127,69,103,100,156,150,101,82,126,79,155,139,78,75,87,62,70,75,86,101,49,337,	0,474,897,1036,1333,1720,2369,2581,3170,3502,3691,4257,5532,7479,7733,8178,8450,9179,9926,10640,11320,11803,12449,18357,19021,19529,19978,22616,25777,39947,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	97458325	97460319	chr10:97458325-97460319	0	-	97458325	97458325	8553170	4	394,101,60,958,	0,474,897,1036,
#Partially deleted in new
chr10	97460072	97461366	chr10:97460072-97461366	0	-	97460072	97460072	8553170	3	160,57,460,	0,622,834,
#Deleted in new
chr10	97461588	97463006	chr10:97461588-97463006	0	-	97461588	97461588	8553170	3	308,103,424,	0,428,994,
#Partially deleted in new
chr10	97465864	97470140	chr10:97465864-97470140	0	-	97467537	97470140	789624	9	90,101,82,126,99,155,139,78,12,	0,194,639,911,1640,2387,3101,3781,4264,
#Partially deleted in new
chr10	97469094	97498410	chr10:97469094-97498410	0	-	97469094	97498384	789624	12	10,78,75,60,62,129,70,75,86,101,49,138,	0,551,1034,1680,7588,7740,8252,8760,9209,11847,15008,29178,
#Partially deleted in new
chr10	97469652	97498432	chr10:97469652-97498432	0	-	97481031	97498384	789624	10	71,75,87,62,129,70,75,86,101,160,	0,476,1122,7030,7182,7694,8202,8651,11289,28620,
#Partially deleted in new
chr10	97469672	97498794	chr10:97469672-97498794	0	-	97469672	97469672	8553170	11	51,75,87,62,129,70,75,86,101,49,99,	0,456,1102,7010,7162,7674,8182,8631,11269,14430,29023,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	97470830	97498429	chr10:97470830-97498429	0	-	97470830	97498384	789624	10	31,62,129,70,75,86,117,101,49,157,	0,5852,6004,6516,7024,7473,9410,10111,13272,27442,
#Partially deleted in new
chr10	97476682	97498429	chr10:97476682-97498429	0	-	97480900	97498378	789624	8	62,129,70,75,86,148,49,157,	0,152,664,1172,1621,4212,7420,21590,
#Partially deleted in new
chr10	97476728	97498399	chr10:97476728-97498399	0	-	97476890	97498384	789624	8	16,85,70,75,86,101,49,127,	0,106,618,1126,1575,4213,7374,21544,
#Partially deleted in new
chr10	97476916	97498447	chr10:97476916-97498447	0	-	97476916	97476916	8553170	6	500,75,86,101,49,175,	0,938,1387,4025,7186,21356,
#Partially deleted in new
chr10	97498867	97571209	chr10:97498867-97571209	3	+	97499203	97570523	789624	3	406,228,1072,	0,69046,71270,
#Partially deleted in new
chr10	97572498	97583882	chr10:97572498-97583882	1	+	97572707	97583725	789624	8	377,102,159,108,99,99,99,307,	0,5301,5741,5999,8356,8817,10105,11077,
#Partially deleted in new
chr10	97572498	97583882	chr10:97572498-97583882	3	+	97572707	97583725	789624	9	377,102,159,108,99,99,99,99,307,	0,5301,5741,5999,8356,8817,9816,10105,11077,
#Partially deleted in new
chr10	97572498	97583884	chr10:97572498-97583884	1	+	97572788	97583725	789624	9	377,102,159,108,99,99,99,99,309,	0,5301,5741,5999,8356,8817,9816,10105,11077,
#Partially deleted in new
chr10	97572778	97583884	chr10:97572778-97583884	1	+	97572788	97583725	789624	8	97,102,159,108,99,99,99,309,	0,5021,5461,5719,8076,8537,9825,10797,
#Partially deleted in new
chr10	97584322	97600948	chr10:97584322-97600948	0	+	97584322	97584322	8553170	3	592,129,1860,	0,14452,14766,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	97584342	97612802	chr10:97584342-97612802	3	+	97584703	97611659	0	7	572,129,128,135,97,134,1293,	0,14432,14746,15337,15724,17514,27167,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	97584342	97612802	chr10:97584342-97612802	1	+	97584703	97611659	0	3	572,134,1293,	0,17514,27167,
#Partially deleted in new
chr10	97584373	97673910	chr10:97584373-97673910	3	+	97584703	97673742	789624	10	541,134,201,132,154,62,100,134,60,330,	0,17483,66567,71911,72447,78533,80511,82064,82687,89207,
#Deleted in new
chr10	97589726	97590934	chr10:97589726-97590934	3	+	97589897	97590569	789624	1	1208,	0,
#Deleted in new
chr10	97599801	97602240	chr10:97599801-97602240	0	+	97599801	97602112	789624	4	13,97,134,140,	0,265,2055,2299,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	97614552	97633480	chr10:97614552-97633480	1	-	97616262	97619653	789624	5	1859,110,115,97,134,	0,2125,2655,5034,18794,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	97614552	97633500	chr10:97614552-97633500	3	-	97616392	97619653	789624	4	1859,115,97,154,	0,2655,5034,18794,
#Partially deleted in new
chr10	97619409	97633491	chr10:97619409-97633491	1	-	97619512	97619653	789624	2	274,145,	0,13937,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	97640685	97676434	chr10:97640685-97676434	3	+	97640742	97673742	0	9	492,201,132,154,62,100,134,60,2854,	0,10255,15599,16135,22221,24199,25752,26375,32895,
#Partially deleted in new
chr10	97677423	97687323	chr10:97677423-97687323	3	-	97677868	97679905	789624	3	602,297,558,	0,2195,9342,
#Partially deleted in new
chr10	97713172	97717348	chr10:97713172-97717348	0	+	97713172	97713172	8553170	4	113,85,257,155,	0,2148,2556,4021,
#Partially deleted in new
chr10	97713516	97717627	chr10:97713516-97717627	0	+	97713516	97713516	8553170	4	45,85,126,434,	0,1804,2343,3677,
#Partially deleted in new
chr10	97713723	97718152	chr10:97713723-97718152	3	+	97713876	97714398	789624	2	2262,959,	0,3470,
#Partially deleted in new
chr10	97714693	97717479	chr10:97714693-97717479	0	+	97714693	97714693	8553170	3	377,126,286,	0,1166,2500,
#Partially deleted in new
chr10	97737120	97760906	chr10:97737120-97760906	1	+	97738477	97759300	0	11	201,173,187,96,113,140,72,145,47,82,1671,	0,1356,7608,11148,12353,13210,14270,15917,20144,20521,22115,
#Partially deleted in new
chr10	97737120	97760906	chr10:97737120-97760906	1	+	97738477	97759300	0	10	201,198,96,113,140,72,145,47,82,1671,	0,1356,11148,12353,13210,14270,15917,20144,20521,22115,
#Partially deleted in new
chr10	97737120	97760906	chr10:97737120-97760906	1	+	97744754	97759300	0	10	201,187,96,113,140,87,145,47,82,1671,	0,7608,11148,12353,13210,14255,15917,20144,20521,22115,
#Partially deleted in new
chr10	97737120	97760906	chr10:97737120-97760906	1	+	97738477	97759300	0	9	201,198,113,140,72,145,47,82,1671,	0,1356,12353,13210,14270,15917,20144,20521,22115,
#Partially deleted in new
chr10	97737122	97760907	chr10:97737122-97760907	3	+	97738477	97759300	0	13	203,198,71,187,96,113,140,72,21,145,47,82,1672,	0,1354,5971,7606,11146,12351,13208,14268,15734,15915,20142,20519,22113,
#Partially deleted in new
chr10	97737127	97760895	chr10:97737127-97760895	1	+	97738477	97759300	0	13	198,198,71,187,96,113,140,87,21,145,47,82,1660,	0,1349,5966,7601,11141,12346,13203,14248,15729,15910,20137,20514,22108,
#Partially deleted in new
chr10	97737139	97760895	chr10:97737139-97760895	1	+	97738477	97759300	0	12	186,198,71,187,96,113,140,72,145,47,82,1660,	0,1337,5954,7589,11129,12334,13191,14251,15898,20125,20502,22096,
#Deleted in new
chr10	97737182	97738845	chr10:97737182-97738845	0	+	97737182	97737182	8553170	2	143,369,	0,1294,
#Partially deleted in new
chr10	97750032	97751421	chr10:97750032-97751421	0	+	97750032	97750032	8553170	2	438,46,	0,1343,
#Partially deleted in new
chr10	97757202	97759787	chr10:97757202-97759787	0	+	97757202	97757202	8553170	3	109,82,552,	0,439,2033,
#Deleted in new
chr10	97757641	97758171	chr10:97757641-97758171	0	+	97757641	97757641	8553170	2	82,304,	0,226,
#Partially deleted in new
chr10	97766750	97771952	chr10:97766750-97771952	3	-	97767513	97771833	789624	3	1110,78,648,	0,2917,4554,
#Partially deleted in new
chr10	97828477	97849798	chr10:97828477-97849798	3	-	97828477	97828477	789624	3	157,128,133,	0,1116,21188,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	97850238	97871578	chr10:97850238-97871578	3	+	97850303	97865700	789624	5	77,126,153,102,5989,	0,9219,13691,13929,15351,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	97859448	97871577	chr10:97859448-97871577	1	+	97859448	97865700	789624	4	135,153,102,5988,	0,4481,4719,6141,
#Partially deleted in new
chr10	97864999	98030828	chr10:97864999-98030828	3	-	97865547	98030472	789624	15	715,144,43,146,169,101,83,137,146,135,157,137,197,200,380,	0,15249,17786,19206,30245,30885,31909,36503,39669,43013,52500,58264,71170,146138,165449,
#Partially deleted in new
chr10	97864999	97936278	chr10:97864999-97936278	0	-	97865603	97936278	789624	12	715,144,146,169,101,83,137,146,135,157,137,109,	0,15249,19206,30245,30885,31909,36503,39669,43013,52500,58264,71170,
#Partially deleted in new
chr10	97866230	97871580	chr10:97866230-97871580	0	+	97866230	97866230	8553170	2	145,515,	0,4835,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	97878396	97884242	chr10:97878396-97884242	0	-	97878632	97884242	789624	3	293,144,37,	0,1852,5809,
#Partially deleted in new
chr10	97879628	98030828	chr10:97879628-98030828	1	-	97879682	98030472	789624	15	173,144,43,146,169,101,83,137,146,135,157,137,197,200,380,	0,620,3157,4577,15616,16256,17280,21874,25040,28384,37871,43635,56541,131509,150820,
#Partially deleted in new
chr10	97879650	98011337	chr10:97879650-98011337	1	-	97879682	98011337	789624	14	151,144,43,146,169,101,83,137,146,135,157,137,197,200,	0,598,3135,4555,15594,16234,17258,21852,25018,28362,37849,43613,56519,131487,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	97880345	97884548	chr10:97880345-97884548	0	-	97880345	97880345	8553170	3	47,43,343,	0,2440,3860,
#Deleted in new
chr10	98076360	98076421	chr10:98076360-98076421	3	-	98076360	98076360	8553170	1	61,	0,
#Partially deleted in new
chr10	98134623	98244894	chr10:98134623-98244894	3	+	98208114	98244158	789624	9	83,105,97,1799,176,71,96,141,804,	0,28669,51843,73477,96888,99822,100801,101400,109467,
#Partially deleted in new
chr10	98163286	98244894	chr10:98163286-98244894	1	+	98208114	98244158	789624	7	111,1799,176,71,96,141,804,	0,44814,68225,71159,72138,72737,80804,
#Partially deleted in new
chr10	98163286	98244894	chr10:98163286-98244894	1	+	98208114	98244158	789624	9	111,97,1799,42,176,71,96,141,804,	0,23180,44814,48020,68225,71159,72138,72737,80804,
#Partially deleted in new
chr10	98163286	98244892	chr10:98163286-98244892	1	+	98163394	98244158	789624	6	111,176,71,96,141,802,	0,68225,71159,72138,72737,80804,
#Partially deleted in new
chr10	98247689	98268250	chr10:98247689-98268250	3	-	98248920	98263019	789624	15	1302,112,137,116,244,163,168,155,184,220,39,206,179,309,119,	0,3375,3876,4663,5863,7887,9090,9960,10291,11319,11701,13232,14345,15053,20442,
#Partially deleted in new
chr10	98252022	98256575	chr10:98252022-98256575	3	+	98252022	98252022	8553170	2	180,988,	0,3565,
#Partially deleted in new
chr10	98383564	98415184	chr10:98383564-98415184	3	-	98383797	98415135	789624	16	304,121,107,155,157,73,135,142,98,62,154,156,74,94,20,176,	0,1382,3636,4789,7033,7445,8867,9377,11631,11826,13780,16537,24017,24339,27374,31444,
#Partially deleted in new
chr10	98383564	98411877	chr10:98383564-98411877	0	-	98383564	98383564	8553170	15	304,121,107,157,212,135,142,98,62,154,156,74,94,346,703,	0,1382,3636,7033,7306,8867,9377,11631,11826,13780,16537,24017,24339,27048,27610,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	98387200	98388436	chr10:98387200-98388436	0	-	98387200	98387200	8553170	3	107,220,83,	0,664,1153,
#Deleted in new
chr10	98395217	98395307	chr10:98395217-98395307	3	-	98395217	98395217	5263520	1	90,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	98413947	98415058	chr10:98413947-98415058	0	-	98413947	98413947	8553170	3	348,103,50,	0,784,1061,
#Deleted in new
chr10	98414166	98415158	chr10:98414166-98415158	0	-	98414166	98414166	8553170	2	129,150,	0,842,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr10	98416197	98446926	chr10:98416197-98446926	3	-	98417563	98443240	789624	20	1529,83,114,145,66,135,62,180,168,50,70,99,100,161,109,143,138,117,114,120,	0,1977,3847,6171,7405,7555,8115,9343,9620,11017,13375,13593,14373,14933,17785,19074,19437,26926,29102,30609,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr10	98416197	98446910	chr10:98416197-98446910	1	-	98417563	98443240	789624	20	1529,83,114,145,66,135,62,180,168,50,70,99,100,161,109,143,138,117,105,104,	0,1977,3847,6171,7405,7555,8115,9343,9620,11017,13375,13593,14373,14933,17785,19074,19437,26926,29102,30609,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr10	98416198	98446947	chr10:98416198-98446947	1	-	98417563	98443240	789624	20	1528,83,114,141,70,135,62,180,168,50,70,99,100,161,109,143,138,117,105,141,	0,1976,3846,6170,7400,7554,8114,9342,9619,11016,13374,13592,14372,14932,17784,19073,19436,26925,29101,30608,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr10	98417014	98446887	chr10:98417014-98446887	0	-	98417014	98417014	8553170	19	712,83,114,145,66,135,62,180,168,50,70,100,161,152,143,138,117,114,81,	0,1160,3030,5354,6588,6738,7298,8526,8803,10200,12558,13556,14116,16925,18257,18620,26109,28285,29792,
#Deleted in new
chr10	98418151	98420369	chr10:98418151-98420369	0	-	98418151	98418151	8553170	2	106,325,	0,1893,
#Partially deleted in new
chr10	98423607	98431282	chr10:98423607-98431282	0	-	98423607	98431282	789624	9	61,135,62,180,168,50,70,100,152,	0,145,705,1933,2210,3607,5965,6963,7523,
#Partially deleted in new
chr10	98423607	98434091	chr10:98423607-98434091	0	-	98423607	98423607	8553170	9	61,135,62,180,50,70,100,161,152,	0,145,705,1933,3607,5965,6963,7523,10332,
#Partially deleted in new
chr10	98423616	98434091	chr10:98423616-98434091	0	-	98423616	98423616	8553170	8	52,135,62,180,50,70,100,152,	0,136,696,1924,3598,5956,6954,10323,
#Deleted in new
chr10	98423879	98426103	chr10:98423879-98426103	0	-	98423879	98423879	8553170	4	8,62,180,286,	0,433,1661,1938,
#Partially deleted in new
chr10	98425905	98446873	chr10:98425905-98446873	0	-	98425905	98425905	8553170	9	80,50,70,100,109,138,117,114,67,	0,1309,3667,4665,8077,9729,17218,19394,20901,
#Partially deleted in new
chr10	98429150	98446913	chr10:98429150-98446913	1	-	98429534	98443240	789624	10	492,99,100,161,109,143,138,117,114,107,	0,640,1420,1980,4832,6121,6484,13973,16149,17656,
#Partially deleted in new
chr10	98429155	98434091	chr10:98429155-98434091	0	-	98429534	98434091	789624	4	487,100,161,109,	0,1415,1975,4827,
#Partially deleted in new
chr10	98430570	98446862	chr10:98430570-98446862	0	-	98430570	98430570	8553170	7	100,161,109,138,117,114,56,	0,560,3412,5064,12553,14729,16236,
#Deleted in new
chr10	98431291	98431360	chr10:98431291-98431360	3	-	98431291	98431291	5263520	1	69,	0,
#Partially deleted in new
chr10	98435085	98445413	chr10:98435085-98445413	0	-	98435085	98435085	8553170	4	329,138,117,114,	0,549,8038,10214,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	98442387	98446927	chr10:98442387-98446927	0	-	98442387	98442387	8553170	4	570,117,114,121,	0,736,2912,4419,
#Partially deleted in new
chr10	98457076	98744071	chr10:98457076-98744071	1	-	98459573	98744057	789624	9	2663,147,146,115,107,94,48,172,189,	0,25559,32974,157827,163525,184770,236823,264580,286806,
#Partially deleted in new
chr10	98459117	99235862	chr10:98459117-99235862	1	-	98459573	99235802	789624	11	622,147,146,115,107,94,48,172,162,158,350,	0,23518,30933,155786,161484,182729,234782,262539,685120,773230,776395,
#Partially deleted in new
chr10	98459117	99235862	chr10:98459117-99235862	3	-	98459573	99235802	789624	12	622,147,146,115,107,94,48,172,174,162,158,350,	0,23518,30933,155786,161484,182729,234782,262539,284765,685120,773230,776395,
#Partially deleted in new
chr10	98459316	99235862	chr10:98459316-99235862	1	-	98459573	99235802	789624	10	423,147,146,115,107,94,48,172,158,350,	0,23319,30734,155587,161285,182530,234583,262340,773031,776196,
#Partially deleted in new
chr10	98459573	99235802	chr10:98459573-99235802	1	-	98461785	99235802	789624	13	166,70,147,146,115,107,94,48,172,174,162,158,290,	0,2176,23062,30477,155330,161028,182273,234326,262083,284309,684664,772774,775939,
#Partially deleted in new
chr10	98924498	98924568	chr10:98924498-98924568	3	-	98924498	98924498	5263520	1	70,	0,
#Partially deleted in new
chr10	99013102	99013952	chr10:99013102-99013952	7	-	99013102	99013102	16724991	2	350,183,	0,667,
#Deleted in new
chr10	99047638	99048319	chr10:99047638-99048319	7	+	99047638	99047638	16724991	1	681,	0,
#Deleted in new
chr10	99232348	99235802	chr10:99232348-99235802	1	-	99232348	99235802	789624	2	157,290,	0,3164,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	99329098	99394330	chr10:99329098-99394330	3	+	99329387	99391516	789624	11	1862,144,141,170,100,48,164,184,150,102,2894,	0,28413,31736,33128,35318,35856,47956,58721,59053,61207,62338,
#Partially deleted in new
chr10	99368336	99377328	chr10:99368336-99377328	0	+	99368336	99368336	8553170	2	344,274,	0,8718,
#Partially deleted in new
chr10	99396869	99431569	chr10:99396869-99431569	3	-	99397546	99430565	0	9	817,143,166,151,105,113,124,182,1122,	0,5710,6599,6854,8886,9267,9856,23754,33578,
#Partially deleted in new
chr10	99397464	99403749	chr10:99397464-99403749	0	-	99397464	99397464	8553170	3	222,143,281,	0,5115,6004,
#Partially deleted in new
chr10	99420266	99430624	chr10:99420266-99430624	0	-	99420266	99420266	8553170	2	539,177,	0,10181,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	99430918	99438098	chr10:99430918-99438098	3	+	99430918	99430918	8553170	2	3022,468,	0,6712,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	99431190	99438117	chr10:99431190-99438117	0	+	99431190	99431190	8553170	4	75,395,119,2409,	0,2355,4314,4518,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	99433544	99461743	chr10:99433544-99461743	0	+	99433544	99433544	8553170	4	87,201,213,1135,	0,195,18240,27064,
#Deleted in new
chr10	99526349	99531177	chr10:99526349-99531177	3	-	99526349	99526349	789624	5	117,72,316,95,166,	0,273,1456,2240,4662,
#Deleted in new
chr10	99526349	99527443	chr10:99526349-99527443	0	-	99526349	99526349	8553170	3	117,72,148,	0,273,946,
#Deleted in new
chr10	99526947	99528467	chr10:99526947-99528467	3	+	99526947	99526947	8553170	2	257,474,	0,1046,
#Deleted in new
chr10	99532932	99536524	chr10:99532932-99536524	3	+	99533131	99535721	789624	2	557,1540,	0,2052,
#Deleted in new
chr10	99532952	99536521	chr10:99532952-99536521	1	+	99533131	99535605	789624	3	537,453,996,	0,2032,2573,
#Partially deleted in new
chr10	99610521	99620364	chr10:99610521-99620364	3	-	99610848	99620335	789624	4	845,57,229,320,	0,2021,3174,9523,
#Partially deleted in new
chr10	99610521	99620147	chr10:99610521-99620147	0	-	99610848	99620147	789624	3	845,57,103,	0,2021,9523,
#Partially deleted in new
chr10	99610985	99620609	chr10:99610985-99620609	0	-	99610985	99610985	8553170	4	381,57,229,77,	0,1557,2710,9547,
#Partially deleted in new
chr10	99613468	99620169	chr10:99613468-99620169	0	-	99613468	99613468	8553170	2	456,125,	0,6576,
#Deleted in new
chr10	99621054	99621918	chr10:99621054-99621918	3	+	99621054	99621054	8553170	1	864,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	99651594	99659284	chr10:99651594-99659284	3	-	99651594	99651594	8553170	3	616,81,140,	0,2230,7550,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	99651594	99732112	chr10:99651594-99732112	3	-	99724064	99732049	8553170	13	616,81,77,37,79,114,155,82,168,104,123,182,153,	0,2230,26334,28174,40011,64753,66751,69392,72361,75373,75846,77958,80365,
#Partially deleted in new
chr10	99659505	99706240	chr10:99659505-99706240	3	+	99659956	99704683	789624	13	83,103,183,206,151,104,57,134,167,325,86,162,1789,	0,356,1940,19755,20219,26286,29188,31879,36450,39028,41467,43006,44946,
#Deleted in new
chr10	99697406	99697949	chr10:99697406-99697949	7	-	99697406	99697406	16724991	1	543,	0,
#Partially deleted in new
chr10	99698665	99702674	chr10:99698665-99702674	0	+	99698665	99700884	789624	3	193,192,163,	0,2201,3846,
#Partially deleted in new
chr10	99702557	99743323	chr10:99702557-99743323	0	+	99702557	99702557	8553170	5	116,193,72,60,171,	0,20360,33688,37152,40595,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	99711843	99732100	chr10:99711843-99732100	1	-	99713413	99732049	789624	9	1636,114,155,82,168,187,123,182,141,	0,4504,6502,9143,12112,15124,15597,17709,20116,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	99713514	99732100	chr10:99713514-99732100	3	-	99714586	99732049	789624	9	1204,114,155,82,168,187,123,182,141,	0,2833,4831,7472,10441,13453,13926,16038,18445,
#Partially deleted in new
chr10	99714651	99716646	chr10:99714651-99716646	0	-	99714651	99714651	8553170	2	67,299,	0,1696,
#Partially deleted in new
chr10	99732219	99756134	chr10:99732219-99756134	3	+	99732348	99755739	0	9	190,72,60,210,36,134,28,106,510,	0,4026,7490,10933,11817,15037,18149,22309,23405,
#Partially deleted in new
chr10	99732280	99755708	chr10:99732280-99755708	0	+	99732348	99754540	789624	8	129,72,60,210,36,134,106,84,	0,3965,7429,10872,11756,14976,22248,23344,
#Partially deleted in new
chr10	99732395	99754550	chr10:99732395-99754550	0	+	99739765	99754550	789624	8	165,72,60,210,36,134,28,22,	0,3850,7314,10757,11641,14861,17973,22133,
#Partially deleted in new
chr10	99782639	99852594	chr10:99782639-99852594	3	+	99782844	99851631	789624	32	238,174,126,135,108,56,235,164,178,255,66,138,147,85,67,127,177,168,181,127,136,220,155,156,200,127,102,144,159,167,195,1093,	0,1968,9594,10911,11252,11773,14457,16567,17746,21379,22742,24744,25443,27494,28896,30378,34668,36150,36449,47667,48076,48971,49337,51740,53451,59327,61159,61682,62984,64321,67962,68862,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	99782639	99796692	chr10:99782639-99796692	0	+	99782639	99782639	8553170	7	238,174,126,135,108,56,184,	0,1968,9594,10911,11252,11773,13869,
#Partially deleted in new
chr10	99782639	99794348	chr10:99782639-99794348	1	+	99782844	99794011	8553170	5	238,174,126,135,457,	0,1968,9594,10911,11252,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	99782704	99799215	chr10:99782704-99799215	0	+	99782844	99796384	8553170	9	173,174,126,135,108,56,491,235,5,	0,1903,9529,10846,11187,11708,13658,14392,16506,
#Partially deleted in new
chr10	99782704	99799220	chr10:99782704-99799220	0	+	99782844	99794011	8553170	8	173,174,126,135,218,56,235,14,	0,1903,9529,10846,11187,11708,14392,16502,
#Partially deleted in new
chr10	99782731	99852594	chr10:99782731-99852594	1	+	99782844	99851631	789624	32	146,174,126,135,108,56,235,164,178,255,66,138,147,85,67,127,177,168,181,127,136,220,155,156,200,127,102,144,159,167,195,1093,	0,1876,9502,10819,11160,11681,14365,16475,17654,21287,22650,24652,25351,27402,28804,30286,34576,36058,36357,47575,47984,48879,49245,51648,53359,59235,61067,61590,62892,64229,67870,68770,
#Partially deleted in new
chr10	99782762	99798096	chr10:99782762-99798096	0	+	99782762	99782762	8553170	7	115,174,126,135,108,56,1000,	0,1845,9471,10788,11129,11650,14334,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	99782802	99799220	chr10:99782802-99799220	0	+	99782844	99796406	8553170	9	75,174,126,135,108,56,463,235,14,	0,1805,9431,10748,11089,11610,13588,14294,16404,
#Deleted in new
chr10	99788563	99789410	chr10:99788563-99789410	7	-	99788563	99788563	16724991	1	847,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	99792288	99794623	chr10:99792288-99794623	0	+	99792288	99792288	8553170	4	71,135,108,211,	0,1262,1603,2124,
#Partially deleted in new
chr10	99843709	99850713	chr10:99843709-99850713	0	+	99843709	99843709	8553170	5	191,144,159,167,112,	0,612,1914,3251,6892,
#Partially deleted in new
chr10	99845748	99852044	chr10:99845748-99852044	0	+	99845748	99849751	8553170	5	34,167,182,195,543,	0,1212,3975,4853,5753,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr10	99875576	100009919	chr10:99875576-100009919	3	-	99877150	99972124	0	17	1760,551,199,180,333,129,105,131,200,18,148,100,194,1992,123,155,82,	0,4234,8434,10110,10723,13248,19369,20690,22509,23166,24342,32418,33376,79637,93538,96403,134261,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	99875576	99914082	chr10:99875576-99914082	1	-	99877150	99914076	789624	14	1760,551,199,180,333,129,105,131,200,18,148,100,194,130,	0,4234,8434,10110,10723,13248,19369,20690,22509,23166,24342,32418,33376,38376,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	99875576	99930996	chr10:99875576-99930996	1	-	99877150	99930763	789624	14	1760,551,199,180,333,129,105,131,200,18,148,100,194,1389,	0,4234,8434,10110,10723,13248,19369,20690,22509,23166,24342,32418,33376,54031,
#Partially deleted in new
chr10	99886403	99889495	chr10:99886403-99889495	0	-	99886403	99886403	8553170	2	229,671,	0,2421,
#Partially deleted in new
chr10	99927009	99929838	chr10:99927009-99929838	0	+	99927009	99927009	8553170	3	290,81,103,	0,1150,2726,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	99927208	99958381	chr10:99927208-99958381	3	+	99927208	99927208	789624	5	91,81,159,110,1593,	0,951,28465,29273,29580,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	100042192	100081877	chr10:100042192-100081877	3	-	100042426	100081625	0	9	381,119,100,140,112,183,156,197,475,	0,6565,12154,14820,21421,22995,27521,33718,39210,
#Partially deleted in new
chr10	100048766	100065394	chr10:100048766-100065394	0	-	100048766	100065337	789624	5	110,100,140,112,207,	0,5580,8246,14847,16421,
#Partially deleted in new
chr10	100105753	100140151	chr10:100105753-100140151	7	-	100105753	100105753	16724991	7	65,140,174,143,149,163,158,	0,2611,11516,15194,16748,29597,34240,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	100114416	100115223	chr10:100114416-100115223	7	-	100114416	100114416	16724991	1	807,	0,
#Partially deleted in new
chr10	100143064	100143995	chr10:100143064-100143995	7	-	100143064	100143064	16724991	2	226,382,	0,549,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	100150093	100188334	chr10:100150093-100188334	3	-	100152130	100185626	789624	11	2259,80,90,92,59,74,126,62,47,82,2821,	0,4766,6051,13910,17254,24114,25851,28039,29107,33662,35420,
#Partially deleted in new
chr10	100151807	100186033	chr10:100151807-100186033	1	-	100152130	100185626	789624	12	545,80,90,92,59,74,126,62,47,82,124,72,	0,3052,4337,12196,15540,22400,24137,26325,27393,31948,33706,34154,
#Partially deleted in new
chr10	100154859	100186029	chr10:100154859-100186029	0	-	100154859	100185626	789624	11	80,90,92,59,74,126,62,47,82,124,126,	0,1285,9144,12488,19348,21085,23273,24341,28896,30654,31044,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr10	100188297	100229619	chr10:100188297-100229619	3	-	100189597	100229532	0	21	1330,100,134,148,97,50,110,62,152,124,103,195,136,108,125,90,89,70,115,95,192,	0,2571,5000,5686,6127,11673,12373,13790,16208,16778,18932,21297,29697,30420,30710,30972,32290,33814,34568,37625,41130,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	100188366	100195942	chr10:100188366-100195942	0	-	100188366	100188366	8553170	3	1261,100,3484,	0,2502,4092,
#Partially deleted in new
chr10	100189191	100194079	chr10:100189191-100194079	0	-	100189191	100189191	8553170	4	436,100,43,96,	0,1677,4197,4792,
#Partially deleted in new
chr10	100190670	100193423	chr10:100190670-100193423	0	-	100190670	100190670	8553170	2	298,126,	0,2627,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	100229666	100234000	chr10:100229666-100234000	3	+	100229666	100229666	8553170	5	58,112,415,213,48,	0,1348,1579,3564,4286,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	100232297	100267680	chr10:100232297-100267680	0	-	100260271	100267593	789624	13	1074,98,120,210,80,115,141,85,119,102,63,85,110,	0,3369,4552,5724,11400,13501,14497,17950,21123,27920,28668,29681,35273,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	100232298	100267598	chr10:100232298-100267598	0	-	100253435	100267593	789624	13	189,262,98,120,210,75,115,141,85,119,79,85,28,	0,811,3368,4551,5723,11399,13500,14496,17949,21122,28667,29680,35272,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	100232304	100254619	chr10:100232304-100254619	0	-	100232304	100232304	8553170	5	1067,98,120,210,1199,	0,3362,4545,5717,21116,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	100233108	100267673	chr10:100233108-100267673	3	-	100233226	100267593	789624	14	263,98,120,210,80,115,141,85,119,215,102,79,85,103,	0,2558,3741,4913,10589,12690,13686,17139,20312,23153,27109,27857,28870,34462,
#Deleted in new
chr10	100237155	100237302	chr10:100237155-100237302	3	-	100237155	100237155	789624	1	147,	0,
#Partially deleted in new
chr10	100238157	100267631	chr10:100238157-100267631	0	-	100238157	100238157	8553170	7	74,80,115,141,69,119,61,	0,5540,7641,8637,11952,15263,29413,
#Partially deleted in new
chr10	100238182	100246116	chr10:100238182-100246116	0	-	100238182	100238182	8553170	3	49,80,318,	0,5515,7616,
#Partially deleted in new
chr10	100245799	100267623	chr10:100245799-100267623	0	-	100245799	100245799	8553170	6	114,141,85,119,215,53,	0,995,4448,7621,10462,21771,
#Deleted in new
chr10	100248270	100249095	chr10:100248270-100249095	7	+	100248270	100248270	16724991	1	825,	0,
#Partially deleted in new
chr10	100250273	100267667	chr10:100250273-100267667	0	-	100250273	100267593	789624	6	59,119,215,79,85,97,	0,3147,5988,10692,11705,17297,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	100258570	100258677	chr10:100258570-100258677	3	+	100258570	100258570	8553170	1	107,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	100273279	100286378	chr10:100273279-100286378	1	-	100275461	100286139	789624	5	2214,105,120,117,78,	0,6844,7654,12817,13021,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	100273279	100282936	chr10:100273279-100282936	1	-	100275461	100282936	789624	4	2214,105,120,31,	0,6844,7654,9626,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	100273955	100286357	chr10:100273955-100286357	1	-	100275461	100286139	789624	4	1538,105,120,261,	0,6168,6978,12141,
#Partially deleted in new
chr10	100274694	100286712	chr10:100274694-100286712	3	-	100275461	100286659	789624	5	799,105,120,117,108,	0,5429,6239,11402,11910,
#Partially deleted in new
chr10	100280040	100286148	chr10:100280040-100286148	0	-	100280046	100286148	789624	3	188,120,52,	0,893,6056,
#Partially deleted in new
chr10	100280933	100286673	chr10:100280933-100286673	0	-	100280933	100280933	8553170	3	120,236,69,	0,5163,5671,
#Partially deleted in new
chr10	100288153	100330486	chr10:100288153-100330486	3	-	100288395	100330103	0	16	325,85,124,119,127,122,99,121,182,171,229,225,254,128,114,618,	0,818,1861,2247,3147,4794,5127,6381,6788,7968,8826,9228,10408,11437,41057,41715,
#Partially deleted in new
chr10	100288159	100329972	chr10:100288159-100329972	0	-	100288395	100329972	789624	2	319,104,	0,41709,
#Partially deleted in new
chr10	100288395	100329940	chr10:100288395-100329940	0	-	100329299	100329940	789624	16	83,85,124,119,127,122,99,121,182,171,229,225,254,128,136,72,	0,576,1619,2005,2905,4552,4885,6139,6546,7726,8584,8986,10166,11195,40815,41473,
#Partially deleted in new
chr10	100299634	100330264	chr10:100299634-100330264	0	-	100329303	100330103	789624	3	84,114,356,	0,29576,30274,
#Partially deleted in new
chr10	100335562	100346390	chr10:100335562-100346390	3	-	100335562	100335562	8553170	4	202,58,108,103,	0,1418,7162,10725,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	100347123	100364834	chr10:100347123-100364834	3	+	100347504	100360933	0	6	408,283,131,206,233,4101,	0,940,5242,7303,9408,13610,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	100373543	100413604	chr10:100373543-100413604	0	+	100373543	100373543	8553170	5	469,233,125,121,924,	0,7672,20954,21565,39137,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	100373614	100383368	chr10:100373614-100383368	1	+	100373614	100373614	8553170	2	398,2153,	0,7601,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	100398351	100398446	chr10:100398351-100398446	3	-	100398351	100398351	8553170	1	95,	0,
#Partially deleted in new
chr10	100463040	100483744	chr10:100463040-100483744	3	+	100463168	100482816	789624	6	196,34,139,126,143,1474,	0,16011,16833,17957,18871,19230,
#Partially deleted in new
chr10	100486641	100519834	chr10:100486641-100519834	3	-	100487615	100516952	789624	26	1154,72,117,147,59,315,178,162,174,146,127,179,100,99,75,231,135,162,100,143,144,96,196,124,124,53,	0,1385,2216,2610,3061,3366,4064,8743,9616,10493,11025,11387,12063,12518,12882,15612,18719,19398,19679,20783,21266,22365,22674,29454,30232,33140,
#Partially deleted in new
chr10	100486645	100490171	chr10:100486645-100490171	0	-	100486645	100486645	8553170	4	1453,541,59,164,	0,2212,3057,3362,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr10	100486646	100519859	chr10:100486646-100519859	0	-	100509047	100516952	789624	26	1149,72,117,147,59,315,178,162,174,146,127,179,100,99,75,50,57,231,841,100,143,144,96,124,124,78,	0,1380,2211,2605,3056,3361,4059,8738,9611,10488,11020,11382,12058,12513,12877,13463,15007,15607,18714,19674,20778,21261,22360,29449,30227,33135,
#Partially deleted in new
chr10	100486646	100490556	chr10:100486646-100490556	0	-	100486646	100486646	8553170	3	1149,72,1699,	0,1380,2211,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr10	100486647	100519838	chr10:100486647-100519838	0	-	100506033	100516952	789624	25	1148,72,117,147,59,178,162,174,146,127,179,100,99,75,50,231,841,100,143,141,96,196,124,87,57,	0,1379,2210,2604,3055,4058,8737,9610,10487,11019,11381,12057,12512,12876,13462,15606,18713,19673,20777,21260,22359,22668,29448,30226,33134,
#Partially deleted in new
chr10	100486784	100516995	chr10:100486784-100516995	0	-	100506033	100516952	789624	21	1011,72,117,59,178,162,174,146,127,179,99,75,231,841,100,143,144,96,196,124,122,	0,1242,2073,2918,3921,8600,9473,10350,10882,11244,12375,12739,15469,18576,19536,20640,21123,22222,22531,29311,30089,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr10	100486923	100519835	chr10:100486923-100519835	0	-	100509047	100516952	789624	25	872,72,120,147,59,178,162,174,146,127,179,100,99,75,50,231,135,162,100,143,141,96,124,170,54,	0,1103,1934,2328,2779,3782,8461,9334,10211,10743,11105,11781,12236,12600,13186,15330,18437,19116,19397,20501,20984,22083,29172,29950,32858,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	100494844	100508793	chr10:100494844-100508793	0	-	100494844	100494844	8553170	14	702,174,146,127,179,100,99,75,50,231,841,100,141,333,	0,1413,2290,2822,3184,3860,4315,4679,5265,7409,10516,11476,13063,13616,
#Deleted in new
chr10	100496257	100498239	chr10:100496257-100498239	0	-	100496257	100496257	8553170	3	174,127,211,	0,1409,1771,
#Deleted in new
chr10	100497514	100498331	chr10:100497514-100498331	0	-	100497514	100497514	8553170	2	279,303,	0,514,
#Deleted in new
chr10	100498040	100499574	chr10:100498040-100499574	0	-	100498040	100498040	8553170	4	167,100,99,158,	0,664,1119,1376,
#Partially deleted in new
chr10	100502309	100506471	chr10:100502309-100506471	0	-	100502309	100502309	8553170	4	175,135,162,151,	0,3051,3730,4011,
#Partially deleted in new
chr10	100505627	100529871	chr10:100505627-100529871	0	-	100516948	100529851	789624	12	574,100,143,144,96,196,124,87,156,100,127,105,	0,693,1797,2280,3379,3688,10468,11246,20771,21347,23752,24139,
#Partially deleted in new
chr10	100505804	100529871	chr10:100505804-100529871	0	-	100516948	100529851	789624	10	397,100,143,144,96,124,87,100,127,105,	0,516,1620,2103,3202,10291,11069,21170,23575,23962,
#Partially deleted in new
chr10	100506335	100519864	chr10:100506335-100519864	0	-	100509047	100516952	789624	7	85,143,144,96,124,124,83,	0,1089,1572,2671,9760,10538,13446,
#Partially deleted in new
chr10	100507445	100529881	chr10:100507445-100529881	3	-	100524088	100529851	8553170	10	122,144,96,124,87,163,156,100,127,115,	0,462,1561,8650,9428,16531,18953,19529,21934,22321,
#Partially deleted in new
chr10	100516120	100529877	chr10:100516120-100529877	0	-	100529375	100529851	789624	5	99,87,100,141,111,	0,753,10854,13245,13646,
#Partially deleted in new
chr10	100516873	100529864	chr10:100516873-100529864	0	-	100529375	100529851	789624	5	87,156,100,141,98,	0,9525,10101,12492,12893,
#Partially deleted in new
chr10	100523739	100529864	chr10:100523739-100529864	3	-	100523836	100529851	0	5	190,156,100,127,98,	0,2659,3235,5640,6027,
#Partially deleted in new
chr10	100523739	100526598	chr10:100523739-100526598	0	-	100523739	100523739	8553170	2	190,200,	0,2659,
#Partially deleted in new
chr10	100523742	100530000	chr10:100523742-100530000	1	-	100523836	100529498	0	5	187,156,100,127,143,	0,2656,3232,5637,6115,
#Partially deleted in new
chr10	100523936	100529864	chr10:100523936-100529864	1	-	100524088	100529851	0	5	203,156,100,127,98,	0,2462,3038,5443,5830,
#Partially deleted in new
chr10	100524032	100529870	chr10:100524032-100529870	0	-	100529375	100529851	789624	5	107,156,100,141,104,	0,2366,2942,5333,5734,
#Partially deleted in new
chr10	100526048	100529862	chr10:100526048-100529862	0	-	100526048	100526048	8553170	4	506,100,127,96,	0,926,3331,3718,
#Partially deleted in new
chr10	100526716	100529883	chr10:100526716-100529883	0	-	100526716	100526716	8553170	3	358,127,117,	0,2663,3050,
#Partially deleted in new
chr10	100526743	100529879	chr10:100526743-100529879	0	-	100526743	100526743	8553170	3	331,141,113,	0,2622,3023,
#Deleted in new
chr10	100529042	100529879	chr10:100529042-100529879	0	-	100529042	100529042	8553170	2	464,113,	0,724,
#Partially deleted in new
chr10	100529071	100546581	chr10:100529071-100546581	0	+	100536554	100546581	789624	6	325,251,149,146,107,64,	0,7339,11562,15879,16871,17446,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	100535858	100559998	chr10:100535858-100559998	3	+	100535958	100548137	0	8	277,251,149,146,107,64,111,11906,	0,552,4775,9092,10084,10659,11281,12234,
#Partially deleted in new
chr10	100535914	100545968	chr10:100535914-100545968	0	+	100535958	100536426	789624	5	136,251,149,146,26,	0,496,4719,9036,10028,
#Partially deleted in new
chr10	100536197	100540728	chr10:100536197-100540728	0	+	100536197	100536197	8553170	2	464,95,	0,4436,
#Partially deleted in new
chr10	100536469	100545497	chr10:100536469-100545497	0	+	100536469	100536469	8553170	3	192,149,547,	0,4164,8481,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	100666694	100667009	chr10:100666694-100667009	3	-	100666694	100666694	8553170	1	315,	0,
#Partially deleted in new
chr10	100735602	100806599	chr10:100735602-100806599	0	+	100735602	100735602	8553170	4	131,86,120,170,	0,43895,45643,70827,
#Partially deleted in new
chr10	100745710	100829941	chr10:100745710-100829941	3	+	100746260	100827619	789624	10	593,169,198,86,120,176,127,102,87,2399,	0,4035,4983,33787,35535,60719,63399,78937,81298,81832,
#Partially deleted in new
chr10	100745710	100829941	chr10:100745710-100829941	1	+	100746260	100827095	789624	11	593,169,198,86,120,176,127,102,83,87,2399,	0,4035,4983,33787,35535,60719,63399,78937,79191,81298,81832,
#Partially deleted in new
chr10	100745710	100829941	chr10:100745710-100829941	1	+	100746260	100827619	789624	11	593,169,198,86,120,69,176,127,102,87,2399,	0,4035,4983,33787,35535,41232,60719,63399,78937,81298,81832,
#Partially deleted in new
chr10	100746178	100809184	chr10:100746178-100809184	0	+	100746178	100746178	8553170	5	125,86,120,176,75,	0,33319,35067,60251,62931,
#Partially deleted in new
chr10	100746219	100829589	chr10:100746219-100829589	1	+	100746260	100827619	789624	10	84,166,198,86,120,176,127,102,87,2047,	0,3529,4474,33278,35026,60210,62890,78428,80789,81323,
#Partially deleted in new
chr10	100746227	100786970	chr10:100746227-100786970	0	+	100746260	100786970	789624	6	76,169,198,86,120,28,	0,3518,4466,33270,35018,40715,
#Deleted in new
chr10	100746263	100749916	chr10:100746263-100749916	0	+	100746263	100746263	8553170	3	40,1005,171,	0,751,3482,
#Partially deleted in new
chr10	100748849	100824654	chr10:100748849-100824654	0	+	100749690	100824654	789624	7	1065,198,86,96,176,127,7,	0,1844,30648,32396,57580,60260,75798,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	100907173	100907280	chr10:100907173-100907280	3	-	100907173	100907173	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	100911102	100912739	chr10:100911102-100912739	3	-	100911102	100911102	8553170	1	1637,	0,
#Partially deleted in new
chr10	100912568	100965136	chr10:100912568-100965136	3	+	100913110	100961912	789624	20	682,44,731,58,998,71,123,168,103,76,142,103,177,98,88,132,78,87,69,3260,	0,3430,4001,5815,11406,13380,16748,17261,18407,24833,26026,31457,32761,34470,35191,37507,38107,43882,46859,49308,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	100912962	100926760	chr10:100912962-100926760	1	+	100913110	100926254	789624	6	288,44,731,58,998,812,	0,3036,3607,5421,11012,12986,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr10	100912962	100965091	chr10:100912962-100965091	0	+	100913110	100925479	8553170	21	288,44,731,58,998,77,71,123,168,103,76,142,103,177,98,88,132,78,87,69,3215,	0,3036,3607,5421,11012,12442,12986,16354,16867,18013,24439,25632,31063,32367,34076,34797,37113,37713,43488,46465,48914,
#Partially deleted in new
chr10	100912978	100959590	chr10:100912978-100959590	1	+	100913110	100959571	789624	19	272,44,731,58,998,71,123,168,103,76,142,103,177,98,88,132,78,87,163,	0,3020,3591,5405,10996,12970,16338,16851,17997,24423,25616,31047,32351,34060,34781,37097,37697,43472,46449,
#Deleted in new
chr10	100912995	100913886	chr10:100912995-100913886	1	+	100913110	100913302	789624	1	891,	0,
#Partially deleted in new
chr10	100943653	100945356	chr10:100943653-100945356	0	+	100943653	100943653	8553170	2	475,27,	0,1676,
#Deleted in new
chr10	100967687	100968135	chr10:100967687-100968135	3	+	100967687	100967687	8553170	1	448,	0,
#Partially deleted in new
chr10	100969457	100987196	chr10:100969457-100987196	0	-	100969856	100987196	789624	4	447,63,227,107,	0,14297,17291,17632,
#Partially deleted in new
chr10	100969517	100980920	chr10:100969517-100980920	0	+	100972912	100980920	789624	13	74,508,149,63,99,94,114,170,170,145,223,116,99,	0,3011,3611,4029,8114,8777,9009,9331,9584,10330,10604,11060,11304,
#Partially deleted in new
chr10	100969522	100985616	chr10:100969522-100985616	0	+	100972912	100984131	789624	16	402,508,149,63,99,94,114,170,170,145,223,116,161,62,1053,1127,	0,3006,3606,4024,8109,8772,9004,9326,9579,10325,10599,11055,11299,11645,13782,14967,
#Partially deleted in new
chr10	100969526	100978371	chr10:100969526-100978371	0	+	100972912	100978371	789624	6	65,143,149,63,99,77,	0,3367,3602,4020,8105,8768,
#Deleted in new
chr10	100969529	100972885	chr10:100969529-100972885	0	+	100969529	100969529	8553170	3	62,233,357,	0,162,2999,
#Partially deleted in new
chr10	100972539	100984837	chr10:100972539-100984837	1	+	100972912	100984131	789624	14	497,149,63,99,94,114,170,170,145,223,116,161,62,1533,	0,589,1007,5092,5755,5987,6309,6562,7308,7582,8038,8282,8628,10765,
#Partially deleted in new
chr10	100972711	100985258	chr10:100972711-100985258	1	+	100972912	100984893	789624	14	325,149,63,99,94,114,170,170,145,223,116,176,62,769,	0,417,835,4920,5583,5815,6137,6390,7136,7410,7866,8110,8456,11778,
#Partially deleted in new
chr10	100972834	100985615	chr10:100972834-100985615	3	+	100972912	100984131	789624	14	202,149,63,99,94,114,170,170,145,223,116,176,62,2311,	0,294,712,4797,5460,5692,6014,6267,7013,7287,7743,7987,8333,10470,
#Partially deleted in new
chr10	100972994	100979268	chr10:100972994-100979268	0	+	100972994	100972994	8553170	7	42,149,63,99,94,114,167,	0,134,552,4637,5300,5532,6107,
#Deleted in new
chr10	100974984	100975084	chr10:100974984-100975084	3	+	100974984	100974984	5263520	1	100,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	100977820	100987497	chr10:100977820-100987497	1	-	100979252	100987443	0	5	1552,63,227,107,185,	0,5934,8928,9269,9492,
#Partially deleted in new
chr10	100978728	100987456	chr10:100978728-100987456	1	-	100978984	100987443	789624	5	283,63,227,107,144,	0,5026,8020,8361,8584,
#Partially deleted in new
chr10	100979197	100987497	chr10:100979197-100987497	1	-	100979241	100987443	0	6	175,63,127,227,107,185,	0,4557,4750,7551,7892,8115,
#Partially deleted in new
chr10	100980506	100985614	chr10:100980506-100985614	3	-	100980506	100980506	8553170	2	174,168,	0,4940,
#Deleted in new
chr10	100980859	100981420	chr10:100980859-100981420	0	+	100980859	100980859	8553170	2	123,253,	0,308,
#Partially deleted in new
chr10	100981375	100987494	chr10:100981375-100987494	1	-	100981462	100987443	0	5	168,63,227,107,182,	0,2379,5373,5714,5937,
#Partially deleted in new
chr10	100981375	100987433	chr10:100981375-100987433	0	-	100983804	100987433	789624	6	168,63,41,227,107,121,	0,2379,2658,5373,5714,5937,
#Partially deleted in new
chr10	100981375	100987270	chr10:100981375-100987270	0	-	100981375	100981375	8553170	4	168,63,127,181,	0,2379,2572,5714,
#Partially deleted in new
chr10	100981376	100987515	chr10:100981376-100987515	1	-	100981490	100987443	0	6	167,63,127,227,107,203,	0,2378,2571,5372,5713,5936,
#Deleted in new
chr10	100983716	100984790	chr10:100983716-100984790	0	+	100983716	100984790	789624	2	92,301,	0,773,
#Deleted in new
chr10	100984211	100985871	chr10:100984211-100985871	0	+	100984211	100984211	8553170	3	146,314,254,	0,278,1406,
#Deleted in new
chr10	100984310	100985613	chr10:100984310-100985613	1	+	100984509	100984893	789624	2	47,1124,	0,179,
#Deleted in new
chr10	100986273	100987483	chr10:100986273-100987483	1	-	100986733	100987443	0	4	299,289,107,171,	0,413,816,1039,
#Deleted in new
chr10	100986275	100987515	chr10:100986275-100987515	3	-	100986733	100987443	0	3	700,107,203,	0,814,1037,
#Deleted in new
chr10	100986275	100987515	chr10:100986275-100987515	1	-	100986971	100987443	789624	2	700,203,	0,1037,
#Deleted in new
chr10	100986275	100987286	chr10:100986275-100987286	0	-	100986275	100986275	8553170	2	700,197,	0,814,
#Deleted in new
chr10	100986279	100987483	chr10:100986279-100987483	1	-	100986542	100987443	0	4	293,227,107,171,	0,469,810,1033,
#Deleted in new
chr10	100986587	100987513	chr10:100986587-100987513	0	-	100986587	100986587	8553170	2	609,201,	0,725,
#Partially deleted in new
chr10	100987366	100993363	chr10:100987366-100993363	1	+	100989762	100991025	789624	5	191,179,108,186,174,	0,2339,3069,3502,5823,
#Partially deleted in new
chr10	100987535	100994401	chr10:100987535-100994401	3	+	100988210	100993510	789624	5	1918,241,108,142,1212,	0,2108,2900,3333,5654,
#Partially deleted in new
chr10	100987535	100994401	chr10:100987535-100994401	1	+	100988210	100991025	789624	5	1918,241,108,186,1212,	0,2108,2900,3333,5654,
#Partially deleted in new
chr10	100987549	100993580	chr10:100987549-100993580	1	+	100989762	100993510	789624	5	64,241,108,142,391,	0,2094,2886,3319,5640,
#Partially deleted in new
chr10	100987554	100994401	chr10:100987554-100994401	0	+	100988210	100990547	789624	5	1899,241,228,142,1212,	0,2089,2881,3314,5635,
#Partially deleted in new
chr10	100987555	100991233	chr10:100987555-100991233	0	+	100987555	100987555	8553170	4	58,241,108,365,	0,2088,2880,3313,
#Deleted in new
chr10	100987794	100989884	chr10:100987794-100989884	0	+	100989762	100989884	789624	2	86,241,	0,1849,
#Partially deleted in new
chr10	100989187	100994341	chr10:100989187-100994341	0	+	100989187	100989728	8553170	5	266,179,228,186,1152,	0,518,1248,1681,4002,
#Partially deleted in new
chr10	100989643	100993568	chr10:100989643-100993568	0	+	100989643	100989815	789624	5	33,110,108,186,379,	0,131,792,1225,3546,
#Partially deleted in new
chr10	100996617	101003818	chr10:100996617-101003818	0	+	101002538	101003818	789624	3	54,450,312,	0,5879,6889,
#Partially deleted in new
chr10	100997071	101007836	chr10:100997071-101007836	3	+	101002538	101007168	789624	5	163,450,660,258,1352,	0,5425,6435,8386,9413,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	100997113	101003177	chr10:100997113-101003177	0	+	100997113	100997113	8553170	2	121,681,	0,5383,
#Partially deleted in new
chr10	100998347	101003694	chr10:100998347-101003694	0	+	101002538	101003694	789624	3	63,450,188,	0,4149,5159,
#Deleted in new
chr10	100998686	101002946	chr10:100998686-101002946	0	+	101002538	101002946	789624	2	295,450,	0,3810,
#Partially deleted in new
chr10	100999475	101007836	chr10:100999475-101007836	1	+	101002538	101007168	789624	4	3471,660,258,1352,	0,4031,5982,7009,
#Partially deleted in new
chr10	100999852	101003760	chr10:100999852-101003760	0	+	101002538	101003760	789624	3	100,450,254,	0,2644,3654,
#Partially deleted in new
chr10	101007682	101031129	chr10:101007682-101031129	1	-	101008466	101030219	0	17	1168,101,612,72,92,92,176,51,198,396,61,148,177,175,141,391,57,	0,1567,2589,4007,4242,4484,7953,8694,10416,11139,12935,14115,14526,15753,16245,22311,23390,
#Partially deleted in new
chr10	101007682	101031155	chr10:101007682-101031155	3	-	101008466	101030219	0	17	1168,101,612,72,92,92,176,51,198,396,61,148,177,175,141,391,83,	0,1567,2589,4007,4242,4484,7953,8694,10416,11139,12935,14115,14526,15753,16245,22311,23390,
#Partially deleted in new
chr10	101007809	101031105	chr10:101007809-101031105	0	-	101023892	101030219	789624	13	1041,101,608,72,92,92,198,396,61,588,633,391,33,	0,1440,2462,3880,4115,4357,10289,11012,12808,13988,15626,22184,23263,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	101011038	101031129	chr10:101011038-101031129	1	-	101011944	101030219	789624	12	723,92,92,198,396,61,148,177,175,141,391,57,	0,886,1128,7060,7783,9579,10759,11170,12397,12889,18955,20034,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	101017331	101031133	chr10:101017331-101031133	1	-	101017583	101030219	0	10	284,198,396,61,148,177,175,141,391,61,	0,767,1490,3286,4466,4877,6104,6596,12662,13741,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	101017376	101031104	chr10:101017376-101031104	1	-	101017583	101030219	789624	10	407,198,396,61,148,177,175,141,391,32,	0,722,1445,3241,4421,4832,6059,6551,12617,13696,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	101023127	101031114	chr10:101023127-101031114	0	-	101023127	101023127	8553170	4	483,141,391,42,	0,800,6866,7945,
#Deleted in new
chr10	101030033	101032295	chr10:101030033-101032295	0	-	101030033	101030219	789624	2	351,227,	0,2035,
#Deleted in new
chr10	101030061	101031144	chr10:101030061-101031144	0	-	101030061	101030219	789624	3	323,173,72,	0,450,1011,
#Deleted in new
chr10	101030177	101030768	chr10:101030177-101030768	0	-	101030177	101030219	789624	2	207,257,	0,334,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	101031233	101041244	chr10:101031233-101041244	3	+	101034694	101039585	789624	12	301,169,164,171,99,76,86,128,50,50,48,1756,	0,1080,3458,4263,4769,5252,5489,5842,6148,7409,7941,8255,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	101031238	101041240	chr10:101031238-101041240	1	+	101032473	101039585	789624	12	296,169,164,171,99,76,86,128,50,50,48,1752,	0,1075,3453,4258,4764,5247,5484,5837,6143,7404,7936,8250,
#Deleted in new
chr10	101034691	101037167	chr10:101034691-101037167	0	+	101034694	101036693	789624	6	164,171,99,76,142,92,	0,805,1311,1794,1975,2384,
#Deleted in new
chr10	101036061	101037600	chr10:101036061-101037600	0	+	101036061	101036061	8553170	5	40,76,86,128,219,	0,424,661,1014,1320,
#Deleted in new
chr10	101036727	101038009	chr10:101036727-101038009	0	+	101036727	101036727	8553170	4	81,128,50,502,	0,348,654,780,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	101037391	101040629	chr10:101037391-101040629	0	+	101037391	101037391	8553170	2	1301,1455,	0,1783,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	101037951	101041240	chr10:101037951-101041240	0	+	101037951	101037951	8553170	3	741,48,1752,	0,1223,1537,
#Deleted in new
chr10	101060028	101061005	chr10:101060028-101061005	3	-	101060028	101060028	8553170	1	977,	0,
#Deleted in new
chr10	101061840	101065592	chr10:101061840-101065592	3	+	101062592	101064920	789624	5	275,562,161,148,767,	0,701,2420,2660,2985,
#Deleted in new
chr10	101062003	101065103	chr10:101062003-101065103	0	+	101062003	101062003	8553170	4	112,216,148,278,	0,2202,2497,2822,
#Deleted in new
chr10	101062072	101064345	chr10:101062072-101064345	0	+	101062072	101062072	8553170	3	43,118,140,	0,913,2133,
#Deleted in new
chr10	101063077	101067890	chr10:101063077-101067890	0	+	101063077	101063077	8553170	5	26,161,148,118,643,	0,1183,1423,1748,4170,
#Deleted in new
chr10	101066298	101068131	chr10:101066298-101068131	0	+	101066298	101066298	789624	2	250,884,	0,949,
#Deleted in new
chr10	101066394	101067059	chr10:101066394-101067059	0	+	101066394	101066394	8553170	1	665,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	101089320	101131126	chr10:101089320-101131126	3	-	101089320	101089320	789624	3	1382,139,341,	0,37639,41465,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	101090307	101131126	chr10:101090307-101131126	0	-	101090307	101090307	8553170	3	395,139,370,	0,36652,40449,
#Deleted in new
chr10	101130504	101137789	chr10:101130504-101137789	3	+	101131541	101136913	789624	3	1605,202,1099,	0,3670,6186,
#Deleted in new
chr10	101131303	101137497	chr10:101131303-101137497	1	+	101131541	101136671	789624	3	806,202,830,	0,2871,5364,
#Deleted in new
chr10	101131727	101134225	chr10:101131727-101134225	0	+	101131727	101134225	789624	2	382,87,	0,2411,
#Deleted in new
chr10	101132781	101134215	chr10:101132781-101134215	0	+	101132781	101132781	8553170	2	293,41,	0,1393,
#Deleted in new
chr10	101134313	101135516	chr10:101134313-101135516	0	+	101134313	101134313	8553170	2	63,163,	0,1040,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	101176322	101194147	chr10:101176322-101194147	3	+	101176322	101176322	789624	6	375,114,56,142,201,450,	0,666,5367,14748,14987,17375,
#Partially deleted in new
chr10	101181143	101181951	chr10:101181143-101181951	7	-	101181143	101181143	16724991	2	55,430,	0,378,
#Deleted in new
chr10	101226194	101229794	chr10:101226194-101229794	3	-	101227269	101228815	789624	2	1596,1304,	0,2296,
#Deleted in new
chr10	101229593	101232605	chr10:101229593-101232605	0	+	101229593	101229593	8553170	2	221,352,	0,2660,
#Partially deleted in new
chr10	101229610	101238237	chr10:101229610-101238237	0	+	101229610	101229610	789624	3	204,181,299,	0,2643,8328,
#Partially deleted in new
chr10	101232251	101238678	chr10:101232251-101238678	1	+	101232251	101232251	8553170	3	183,109,448,	0,5687,5979,
#Partially deleted in new
chr10	101236067	101238848	chr10:101236067-101238848	1	+	101236067	101236067	8553170	2	1643,910,	0,1871,
#Partially deleted in new
chr10	101237937	101270148	chr10:101237937-101270148	3	+	101237937	101237937	8553170	3	110,127,181,	0,29634,32030,
#Partially deleted in new
chr10	101238002	101238859	chr10:101238002-101238859	1	+	101238002	101238002	8553170	3	45,36,340,	0,228,517,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	101252820	101263550	chr10:101252820-101263550	3	-	101252820	101252820	789624	3	1747,99,376,	0,8046,10354,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	101307528	101307718	chr10:101307528-101307718	3	+	101307528	101307528	8553170	1	190,	0,
#Deleted in new
chr10	101311017	101311505	chr10:101311017-101311505	3	+	101311017	101311017	8553170	2	223,159,	0,329,
#Deleted in new
chr10	101322484	101323394	chr10:101322484-101323394	3	-	101322484	101322484	8553170	3	278,159,85,	0,360,825,
#Partially deleted in new
chr10	101354032	101557319	chr10:101354032-101557319	1	+	101354180	101550860	789624	14	196,108,90,232,187,97,138,119,250,119,111,79,193,4165,	0,76312,125335,167606,171980,177204,178262,178919,180628,181321,182510,184260,196666,199122,
#Partially deleted in new
chr10	101354062	101557321	chr10:101354062-101557321	3	+	101354180	101550860	0	15	166,108,78,90,232,187,97,138,119,250,119,111,79,193,4167,	0,76282,107918,125305,167576,171950,177174,178232,178889,180598,181291,182480,184230,196636,199092,
#Partially deleted in new
chr10	101354068	101521712	chr10:101354068-101521712	0	+	101354068	101354068	8553170	5	160,108,95,90,74,	0,76276,107895,125299,167570,
#Partially deleted in new
chr10	101354106	101557321	chr10:101354106-101557321	1	+	101354180	101550860	0	14	122,78,90,232,187,97,138,119,250,119,111,79,193,4167,	0,107874,125261,167532,171906,177130,178188,178845,180554,181247,182436,184186,196592,199048,
#Partially deleted in new
chr10	101354181	101526194	chr10:101354181-101526194	0	+	101354181	101354181	8553170	6	47,56,78,90,232,182,	0,99319,107799,125186,167457,171831,
#Partially deleted in new
chr10	101354533	101526083	chr10:101354533-101526083	0	+	101430350	101526083	789624	6	76,108,78,90,232,71,	0,75811,107447,124834,167105,171479,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	101364844	101365035	chr10:101364844-101365035	3	-	101364844	101364844	8553170	1	191,	0,
#Partially deleted in new
chr10	101535383	101551191	chr10:101535383-101551191	0	+	101535383	101535383	8553170	4	89,111,79,493,	0,1159,2909,15315,
#Partially deleted in new
chr10	101570559	101596651	chr10:101570559-101596651	0	+	101570559	101570559	8553170	5	190,249,182,81,59,	0,9500,16716,24098,26033,
#Partially deleted in new
chr10	101578881	101588209	chr10:101578881-101588209	1	-	101579452	101587360	0	9	936,169,129,174,318,163,295,161,325,	0,1366,3881,4626,5720,6434,6980,8364,9003,
#Partially deleted in new
chr10	101578881	101588126	chr10:101578881-101588126	1	-	101579452	101587305	789624	5	936,169,129,174,881,	0,1366,3881,4626,8364,
#Partially deleted in new
chr10	101578881	101583193	chr10:101578881-101583193	1	-	101579452	101582975	789624	3	936,169,431,	0,1366,3881,
#Partially deleted in new
chr10	101578881	101587421	chr10:101578881-101587421	1	-	101579452	101587360	0	8	936,169,129,174,318,163,295,176,	0,1366,3881,4626,5720,6434,6980,8364,
#Partially deleted in new
chr10	101578881	101588248	chr10:101578881-101588248	1	-	101579452	101586007	789624	9	936,169,129,174,318,163,295,79,45,	0,1366,3881,4626,5720,6434,6980,8240,9322,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	101578881	101582225	chr10:101578881-101582225	0	-	101578881	101578881	8553170	2	936,1978,	0,1366,
#Partially deleted in new
chr10	101578883	101588270	chr10:101578883-101588270	3	-	101579452	101587360	0	9	934,169,129,174,318,163,295,161,449,	0,1364,3879,4624,5718,6432,6978,8362,8938,
#Partially deleted in new
chr10	101578883	101588270	chr10:101578883-101588270	1	-	101579452	101587311	0	6	934,169,129,174,161,386,	0,1364,3879,4624,8362,9001,
#Partially deleted in new
chr10	101579514	101587406	chr10:101579514-101587406	0	-	101579514	101587360	789624	8	324,169,129,174,42,163,295,161,	0,733,3248,3993,5363,5801,6347,7731,
#Partially deleted in new
chr10	101579674	101584919	chr10:101579674-101584919	0	-	101579674	101579674	8553170	6	143,169,129,174,119,42,	0,573,3088,3833,4927,5203,
#Partially deleted in new
chr10	101579695	101588232	chr10:101579695-101588232	0	-	101579695	101587305	789624	6	122,169,129,174,161,29,	0,552,3067,3812,7550,8508,
#Partially deleted in new
chr10	101580251	101588228	chr10:101580251-101588228	0	-	101580251	101580251	8553170	5	165,129,174,295,25,	0,2511,3256,5610,7952,
#Partially deleted in new
chr10	101583601	101587405	chr10:101583601-101587405	0	-	101583601	101587360	789624	6	80,318,163,295,79,114,	0,1000,1714,2260,3520,3690,
#Partially deleted in new
chr10	101584610	101587200	chr10:101584610-101587200	0	-	101584610	101586007	789624	3	309,295,79,	0,1251,2511,
#Partially deleted in new
chr10	101584686	101588230	chr10:101584686-101588230	0	-	101584686	101587360	789624	5	233,163,295,137,27,	0,629,1175,2559,3517,
#Partially deleted in new
chr10	101584793	101588242	chr10:101584793-101588242	0	-	101584793	101584793	8553170	4	126,163,295,39,	0,522,1068,3410,
#Partially deleted in new
chr10	101585323	101588232	chr10:101585323-101588232	0	-	101585323	101587360	789624	4	155,295,161,411,	0,538,1922,2498,
#Partially deleted in new
chr10	101588287	101609668	chr10:101588287-101609668	3	+	101588336	101609471	789624	6	113,81,125,134,103,302,	0,6370,12450,12915,20547,21079,
#Partially deleted in new
chr10	101588308	101608902	chr10:101588308-101608902	1	+	101588336	101608902	789624	6	92,81,125,134,73,36,	0,6349,12429,12894,16831,20558,
#Partially deleted in new
chr10	101588324	101609447	chr10:101588324-101609447	1	+	101588336	101608902	789624	7	76,81,125,134,73,71,81,	0,6333,12413,12878,16815,20542,21042,
#Partially deleted in new
chr10	101594701	101609439	chr10:101594701-101609439	0	+	101594701	101609421	789624	4	37,125,134,73,	0,6036,6501,14665,
#Partially deleted in new
chr10	101600738	101609661	chr10:101600738-101609661	0	+	101600738	101600738	8553170	4	124,134,178,295,	0,464,8128,8628,
#Partially deleted in new
chr10	101601416	101601497	chr10:101601416-101601497	3	+	101601416	101601416	5263520	1	81,	0,
#Partially deleted in new
chr10	101601416	101601497	chr10:101601416-101601497	3	-	101601416	101601416	5263520	1	81,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	101610663	101626899	chr10:101610663-101626899	0	-	101610663	101610663	8553170	4	747,142,141,2155,	0,964,1673,14081,
#Partially deleted in new
chr10	101610665	101695259	chr10:101610665-101695259	3	-	101611290	101694640	789624	9	745,142,141,66,95,133,186,96,879,	0,962,1671,14079,57220,62249,62822,65675,83715,
#Deleted in new
chr10	101611656	101613153	chr10:101611656-101613153	0	-	101611656	101611656	8553170	3	113,141,150,	0,680,1347,
#Partially deleted in new
chr10	101622858	101622965	chr10:101622858-101622965	3	+	101622858	101622858	8553170	1	107,	0,
#Partially deleted in new
chr10	101624746	101695295	chr10:101624746-101695295	0	-	101624746	101624746	8553170	6	64,95,133,186,96,56,	0,43139,48168,48741,51594,70493,
#Partially deleted in new
chr10	101673564	101676714	chr10:101673564-101676714	0	-	101673564	101673564	8553170	2	109,374,	0,2776,
#Partially deleted in new
chr10	101704651	101708401	chr10:101704651-101708401	3	-	101704651	101704651	8553170	2	54,237,	0,3513,
#Deleted in new
chr10	101770129	101780369	chr10:101770129-101780369	1	-	101770328	101774756	789624	5	490,107,148,37,74,	0,1333,4602,5610,10166,
#Deleted in new
chr10	101770141	101776097	chr10:101770141-101776097	0	-	101775694	101775900	789624	5	478,107,148,235,229,	0,1321,4590,5400,5727,
#Deleted in new
chr10	101770323	101775959	chr10:101770323-101775959	3	-	101770328	101775900	0	6	296,107,181,87,37,91,	0,1139,4408,4806,5416,5545,
#Deleted in new
chr10	101770323	101775900	chr10:101770323-101775900	1	-	101770328	101775900	0	6	296,107,148,87,37,32,	0,1139,4408,4806,5416,5545,
#Deleted in new
chr10	101770323	101775974	chr10:101770323-101775974	1	-	101770328	101775900	0	5	296,107,148,37,106,	0,1139,4408,5416,5545,
#Deleted in new
chr10	101770323	101776070	chr10:101770323-101776070	1	-	101770328	101775900	0	5	296,107,181,37,202,	0,1139,4408,5416,5545,
#Deleted in new
chr10	101770323	101775900	chr10:101770323-101775900	0	-	101770323	101770323	8553170	4	296,107,181,32,	0,1139,4408,5545,
#Deleted in new
chr10	101781324	101783413	chr10:101781324-101783413	3	-	101781735	101783390	789624	6	308,128,94,120,86,141,	0,402,933,1153,1514,1948,
#Deleted in new
chr10	101781331	101783384	chr10:101781331-101783384	0	-	101781331	101781331	8553170	5	301,128,94,120,112,	0,395,926,1146,1941,
#Deleted in new
chr10	101781588	101783375	chr10:101781588-101783375	0	-	101781588	101781588	8553170	5	44,128,120,86,103,	0,138,889,1250,1684,
#Deleted in new
chr10	101781726	101782648	chr10:101781726-101782648	0	-	101781726	101781726	8553170	3	128,94,171,	0,531,751,
#Partially deleted in new
chr10	101784442	101818418	chr10:101784442-101818418	3	-	101786450	101818022	0	16	2145,160,193,86,105,86,175,614,159,285,99,172,131,98,52,595,	0,2921,6453,6911,8396,9470,13537,14399,15799,19292,21602,23287,25741,28587,29112,33381,
#Partially deleted in new
chr10	101784442	101818465	chr10:101784442-101818465	1	-	101786450	101818022	0	15	2145,160,193,86,105,86,175,614,285,99,172,131,98,52,642,	0,2921,6453,6911,8396,9470,13537,14399,19292,21602,23287,25741,28587,29112,33381,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	101786101	101787965	chr10:101786101-101787965	0	-	101786101	101786101	8553170	2	486,602,	0,1262,
#Partially deleted in new
chr10	101786133	101818418	chr10:101786133-101818418	1	-	101786450	101818022	0	15	454,160,193,86,63,86,175,614,285,99,172,131,98,52,595,	0,1230,4762,5220,6705,7779,11846,12708,17601,19911,21596,24050,26896,27421,31690,
#Partially deleted in new
chr10	101786133	101799332	chr10:101786133-101799332	0	-	101786133	101786133	8553170	7	454,160,193,86,105,175,491,	0,1230,4762,5220,6705,11846,12708,
#Partially deleted in new
chr10	101786143	101792946	chr10:101786143-101792946	0	-	101786143	101786143	8553170	3	444,160,108,	0,1220,6695,
#Partially deleted in new
chr10	101786533	101798017	chr10:101786533-101798017	0	-	101786533	101786533	8553170	7	54,160,193,86,105,59,38,	0,830,4362,4820,6305,7152,11446,
#Partially deleted in new
chr10	101786562	101791453	chr10:101786562-101791453	0	-	101786562	101786562	8553170	3	25,160,558,	0,801,4333,
#Deleted in new
chr10	101792607	101794095	chr10:101792607-101794095	0	-	101792607	101792607	8553170	2	336,183,	0,1305,
#Partially deleted in new
chr10	101797045	101818418	chr10:101797045-101818418	1	-	101797929	101818022	0	10	1109,614,159,285,99,172,131,98,52,595,	0,1796,3196,6689,8999,10684,13138,15984,16509,20778,
#Partially deleted in new
chr10	101803746	101817866	chr10:101803746-101817866	0	-	101803746	101817866	789624	6	273,172,131,98,52,43,	0,3983,6437,9283,9808,14077,
#Partially deleted in new
chr10	101819077	101828779	chr10:101819077-101828779	3	+	101819077	101819077	789624	3	171,80,599,	0,8782,9103,
#Partially deleted in new
chr10	101825973	101839872	chr10:101825973-101839872	1	-	101827352	101839840	789624	8	1427,63,105,108,71,70,125,120,	0,1715,1915,2177,2415,2653,3101,13779,
#Partially deleted in new
chr10	101825973	101843920	chr10:101825973-101843920	0	-	101825973	101825973	8553170	11	1427,63,105,108,71,70,28,125,99,96,425,	0,1715,1915,2177,2415,2653,2845,3101,3870,5098,17522,
#Partially deleted in new
chr10	101825974	101843920	chr10:101825974-101843920	1	-	101827352	101843568	789624	9	1426,63,105,108,71,70,125,96,425,	0,1714,1914,2176,2414,2652,3100,5097,17521,
#Partially deleted in new
chr10	101826452	101843844	chr10:101826452-101843844	3	-	101827352	101843568	789624	10	948,63,105,108,71,70,125,54,96,349,	0,1236,1436,1698,1936,2174,2622,3391,4619,17043,
#Deleted in new
chr10	101826972	101827955	chr10:101826972-101827955	0	-	101826972	101826972	8553170	3	298,63,67,	0,716,916,
#Partially deleted in new
chr10	101827185	101843769	chr10:101827185-101843769	1	-	101827352	101843568	789624	7	215,63,105,71,70,125,274,	0,503,703,1203,1441,1889,16310,
#Partially deleted in new
chr10	101827295	101843568	chr10:101827295-101843568	0	-	101827295	101827295	8553170	10	105,63,105,108,71,70,31,125,96,73,	0,393,593,855,1093,1331,1523,1779,3776,16200,
#Partially deleted in new
chr10	101827352	101843568	chr10:101827352-101843568	1	-	101827352	101843568	789624	8	48,63,105,108,71,70,125,73,	0,336,536,798,1036,1274,1722,16143,
#Partially deleted in new
chr10	101827352	101843568	chr10:101827352-101843568	1	-	101827352	101843568	789624	8	48,63,105,108,71,91,125,73,	0,336,536,798,1036,1274,1722,16143,
#Deleted in new
chr10	101827352	101830438	chr10:101827352-101830438	0	-	101827352	101830438	789624	7	48,63,105,108,70,125,15,	0,336,536,798,1274,1722,3071,
#Partially deleted in new
chr10	101827352	101843568	chr10:101827352-101843568	1	-	101827352	101843568	789624	10	48,63,105,108,71,70,125,99,96,73,	0,336,536,798,1036,1274,1722,2491,3719,16143,
#Deleted in new
chr10	101827352	101834369	chr10:101827352-101834369	1	-	101827352	101834369	789624	8	48,63,105,108,71,70,125,103,	0,336,536,798,1036,1274,1722,6914,
#Partially deleted in new
chr10	101827640	101843568	chr10:101827640-101843568	0	-	101827643	101843568	789624	6	111,105,71,70,125,73,	0,248,748,986,1434,15855,
#Deleted in new
chr10	101828266	101829547	chr10:101828266-101829547	0	-	101828266	101828266	8553170	3	193,70,473,	0,360,808,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr10	101845598	102056193	chr10:101845598-102056193	3	-	101847527	102040114	789624	26	2022,117,79,76,127,83,89,61,70,66,59,102,94,76,47,61,44,57,87,75,93,108,147,57,113,109,	0,4177,43813,94264,110998,112051,129613,144952,146370,147939,149698,156372,160941,163775,164378,166124,167234,168369,177878,178076,179557,184039,187427,187684,194414,210486,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	101845598	101889736	chr10:101845598-101889736	0	-	101845598	101845598	8553170	3	2022,117,325,	0,4177,43813,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	101912997	101913279	chr10:101912997-101913279	3	-	101912997	101912997	8553170	1	282,	0,
#Partially deleted in new
chr10	101952604	101952704	chr10:101952604-101952704	3	-	101952604	101952604	8553170	1	100,	0,
#Partially deleted in new
chr10	101990550	102002064	chr10:101990550-102002064	0	-	101990550	102002064	789624	4	61,70,59,94,	0,1418,4746,11420,
#Partially deleted in new
chr10	102029447	102056193	chr10:102029447-102056193	1	-	102029454	102040114	789624	5	298,147,57,113,109,	0,3578,3835,10565,26637,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	102029447	102033438	chr10:102029447-102033438	0	-	102029447	102029447	8553170	3	298,240,156,	0,3485,3835,
#Deleted in new
chr10	102065389	102068038	chr10:102065389-102068038	3	+	102065474	102067802	789624	1	2649,	0,
#Deleted in new
chr10	102085475	102085730	chr10:102085475-102085730	7	-	102085475	102085475	16724991	1	255,	0,
#Deleted in new
chr10	102089967	102090062	chr10:102089967-102090062	7	+	102089967	102089967	16724991	1	95,	0,
#Partially deleted in new
chr10	102107559	102114946	chr10:102107559-102114946	3	-	102108092	102111453	0	11	764,149,124,84,123,173,103,76,45,103,541,	0,1469,1824,2040,2361,2969,3309,3509,3696,3874,6846,
#Partially deleted in new
chr10	102107582	102120453	chr10:102107582-102120453	1	-	102108092	102120110	0	11	741,149,124,84,123,173,103,76,45,103,368,	0,1446,1801,2017,2338,2946,3286,3486,3673,3851,12503,
#Deleted in new
chr10	102110391	102111133	chr10:102110391-102111133	0	-	102110391	102110391	8553170	3	310,103,65,	0,477,677,
#Partially deleted in new
chr10	102110629	102120448	chr10:102110629-102120448	0	-	102110629	102110629	8553170	6	72,103,76,45,103,363,	0,239,439,626,804,9456,
#Partially deleted in new
chr10	102132993	102150331	chr10:102132993-102150331	1	+	102133068	102150029	789624	12	228,189,147,102,2905,54,58,150,67,122,152,406,	0,4856,5625,5885,6106,10051,11256,15378,15634,15823,16184,16932,
#Partially deleted in new
chr10	102133029	102150325	chr10:102133029-102150325	3	+	102133068	102150029	789624	14	192,189,147,102,2905,54,58,71,721,150,67,122,152,400,	0,4820,5589,5849,6070,10015,11220,11990,13642,15342,15598,15787,16148,16896,
#Partially deleted in new
chr10	102141491	102150180	chr10:102141491-102150180	1	+	102141607	102150029	789624	10	513,54,58,71,721,150,67,122,152,255,	0,1553,2758,3528,5180,6880,7136,7325,7686,8434,
#Partially deleted in new
chr10	102141754	102149220	chr10:102141754-102149220	0	+	102141754	102141754	8553170	7	250,54,58,150,67,122,43,	0,1290,2495,6617,6873,7062,7423,
#Partially deleted in new
chr10	102142954	102144834	chr10:102142954-102144834	0	+	102142954	102142954	8553170	2	144,585,	0,1295,
#Deleted in new
chr10	102148392	102149317	chr10:102148392-102149317	0	+	102148392	102148392	8553170	3	302,122,140,	0,424,785,
#Partially deleted in new
chr10	102152175	102163871	chr10:102152175-102163871	1	+	102152410	102162269	789624	13	355,56,140,125,166,146,136,129,111,642,107,93,1761,	0,4843,5013,5255,5873,7017,7257,7720,8057,8276,9380,9657,9935,
#Partially deleted in new
chr10	102152175	102163866	chr10:102152175-102163866	3	+	102152410	102162269	789624	13	355,56,140,125,166,116,136,129,111,642,107,93,1756,	0,4843,5013,5255,5873,7017,7257,7720,8057,8276,9380,9657,9935,
#Partially deleted in new
chr10	102152394	102162599	chr10:102152394-102162599	0	+	102152410	102157494	789624	12	136,56,107,166,116,136,129,111,642,107,93,489,	0,4624,5054,5654,6798,7038,7501,7838,8057,9161,9438,9716,
#Partially deleted in new
chr10	102152403	102162600	chr10:102152403-102162600	1	+	102152410	102162269	789624	13	127,56,143,125,166,116,136,129,111,642,107,93,490,	0,4615,4782,5027,5645,6789,7029,7492,7829,8048,9152,9429,9707,
#Partially deleted in new
chr10	102152403	102163866	chr10:102152403-102163866	0	+	102152410	102159213	789624	9	127,116,136,129,111,642,107,93,1756,	0,6789,7029,7492,7829,8048,9152,9429,9707,
#Partially deleted in new
chr10	102152408	102160559	chr10:102152408-102160559	0	+	102152410	102160559	789624	6	122,166,116,136,129,108,	0,5640,6784,7024,7487,8043,
#Partially deleted in new
chr10	102152412	102159938	chr10:102152412-102159938	0	+	102152412	102159938	789624	7	118,140,125,166,116,136,43,	0,4776,5018,5636,6780,7020,7483,
#Partially deleted in new
chr10	102152414	102163870	chr10:102152414-102163870	0	+	102152414	102162269	789624	13	116,56,140,125,166,146,136,129,111,642,107,93,1760,	0,4604,4774,5016,5634,6778,7018,7481,7818,8037,9141,9418,9696,
#Partially deleted in new
chr10	102160729	102163866	chr10:102160729-102163866	0	+	102160729	102160729	8553170	4	364,107,93,96,	0,826,1103,3041,
#Deleted in new
chr10	102226327	102229589	chr10:102226327-102229589	3	+	102226548	102229252	789624	4	322,132,152,765,	0,1298,2089,2497,
#Partially deleted in new
chr10	102230185	102241474	chr10:102230185-102241474	3	-	102230513	102232080	789624	4	916,203,130,142,	0,1402,1777,11147,
#Deleted in new
chr10	102230185	102232083	chr10:102230185-102232083	1	-	102230513	102232080	789624	4	239,624,203,121,	0,292,1402,1777,
#Partially deleted in new
chr10	102245531	102382899	chr10:102245531-102382899	3	+	102258938	102382336	789624	40	250,106,67,132,119,109,61,55,148,224,166,212,99,195,190,141,89,203,124,126,83,237,94,177,65,124,72,95,154,226,161,241,206,151,131,102,114,181,129,844,	0,13397,14518,98519,105724,106311,106926,108068,112507,112974,113738,114652,115490,116186,116943,117724,118178,119865,120851,121553,121946,122686,123207,123679,124179,124329,124642,124852,125175,129827,130740,131028,131403,133752,133989,134321,134717,134974,135595,136524,
#Partially deleted in new
chr10	102359098	102361187	chr10:102359098-102361187	0	+	102359098	102359098	8553170	2	337,166,	0,1923,
#Partially deleted in new
chr10	102394109	102402529	chr10:102394109-102402529	1	+	102395959	102402376	0	23	491,93,82,41,99,152,107,159,105,86,139,126,210,142,115,214,170,103,152,70,173,112,275,	0,1778,2143,2339,2615,2794,3192,3417,3871,4102,4275,4629,5178,5467,5970,6168,6545,6837,7070,7339,7635,7938,8145,
#Deleted in new
chr10	102394109	102395958	chr10:102394109-102395958	0	+	102394109	102394109	8553170	2	491,71,	0,1778,
#Deleted in new
chr10	102394109	102396298	chr10:102394109-102396298	0	+	102395959	102396298	789624	3	446,93,46,	0,1778,2143,
#Partially deleted in new
chr10	102394596	102402524	chr10:102394596-102402524	3	+	102395959	102402376	0	23	178,93,82,41,99,152,107,159,105,86,139,126,210,142,115,214,170,103,152,70,173,112,273,	0,1291,1656,1852,2128,2307,2705,2930,3384,3615,3788,4142,4691,4980,5483,5681,6058,6350,6583,6852,7148,7451,7655,
#Deleted in new
chr10	102395692	102396785	chr10:102395692-102396785	0	+	102395959	102396785	789624	4	288,82,41,61,	0,560,756,1032,
#Partially deleted in new
chr10	102395705	102402524	chr10:102395705-102402524	1	+	102395959	102402376	0	23	91,93,82,41,99,152,107,159,105,86,139,126,210,142,115,214,170,103,152,70,173,112,270,	0,182,547,743,1019,1198,1596,1821,2275,2506,2679,3033,3582,3871,4374,4572,4949,5241,5474,5743,6039,6342,6549,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	102395705	102399218	chr10:102395705-102399218	0	+	102395705	102395705	8553170	12	91,93,82,41,99,152,107,159,105,86,139,480,	0,182,547,743,1019,1198,1596,1821,2275,2506,2679,3033,
#Partially deleted in new
chr10	102398072	102400061	chr10:102398072-102400061	0	+	102398072	102398072	8553170	7	13,86,139,126,210,142,135,	0,139,312,666,1215,1504,1854,
#Deleted in new
chr10	102400577	102401269	chr10:102400577-102401269	0	+	102400577	102400577	8553170	2	247,323,	0,369,
#Partially deleted in new
chr10	102402616	102419934	chr10:102402616-102419934	3	-	102403199	102417038	789624	18	814,144,145,158,71,191,44,90,59,113,81,195,429,367,103,737,59,61,	0,1225,1966,2281,2566,2729,4606,8241,8441,9090,9530,9764,11152,12246,13400,13768,16084,17257,
#Partially deleted in new
chr10	102402616	102419727	chr10:102402616-102419727	1	-	102403199	102414184	789624	18	814,144,145,158,71,191,44,90,59,113,81,195,429,367,103,247,59,72,	0,1225,1966,2281,2566,2729,4606,8241,8441,9090,9530,9764,11152,12246,13400,13768,16084,17039,
#Partially deleted in new
chr10	102402618	102419144	chr10:102402618-102419144	1	-	102403199	102417038	789624	17	812,144,145,158,71,191,44,90,59,113,81,195,429,367,103,737,444,	0,1223,1964,2279,2564,2727,4604,8239,8439,9088,9528,9762,11150,12244,13398,13766,16082,
#Deleted in new
chr10	102404644	102405462	chr10:102404644-102405462	0	-	102404644	102404644	8553170	3	411,71,117,	0,538,701,
#Deleted in new
chr10	102404935	102406134	chr10:102404935-102406134	0	-	102404935	102404935	8553170	3	120,71,789,	0,247,410,
#Partially deleted in new
chr10	102405347	102409290	chr10:102405347-102409290	0	-	102405347	102409092	789624	3	189,44,396,	0,1875,3547,
#Partially deleted in new
chr10	102405360	102411756	chr10:102405360-102411756	0	-	102405360	102405360	8553170	5	251,44,90,59,50,	0,1862,5497,5697,6346,
#Partially deleted in new
chr10	102416653	102419718	chr10:102416653-102419718	0	-	102416653	102416653	8553170	3	468,59,63,	0,2047,3002,
#Partially deleted in new
chr10	102416709	102421539	chr10:102416709-102421539	0	-	102416709	102416709	8553170	4	412,59,208,648,	0,1991,3371,4182,
#Deleted in new
chr10	102419188	102422149	chr10:102419188-102422149	0	+	102421129	102422149	789624	4	226,131,154,363,	0,1863,2165,2598,
#Deleted in new
chr10	102419232	102420540	chr10:102419232-102420540	0	+	102419232	102419232	8553170	2	182,630,	0,678,
#Deleted in new
chr10	102419813	102423136	chr10:102419813-102423136	3	+	102421129	102422993	789624	4	1369,154,506,333,	0,1540,1973,2990,
#Deleted in new
chr10	102419813	102421512	chr10:102419813-102421512	0	+	102420116	102421512	789624	3	486,131,159,	0,1238,1540,
#Deleted in new
chr10	102419831	102423136	chr10:102419831-102423136	1	+	102421141	102422993	789624	4	1351,154,506,333,	0,1522,1955,2972,
#Deleted in new
chr10	102420528	102422203	chr10:102420528-102422203	0	+	102421129	102422203	789624	4	169,131,154,417,	0,523,825,1258,
#Deleted in new
chr10	102420840	102422188	chr10:102420840-102422188	0	+	102421129	102422188	789624	4	117,131,154,402,	0,211,513,946,
#Partially deleted in new
chr10	102423244	102432661	chr10:102423244-102432661	3	-	102423425	102425188	789624	9	328,61,62,183,131,62,144,84,136,	0,412,553,751,1019,1254,1404,1870,9281,
#Deleted in new
chr10	102423244	102424304	chr10:102423244-102424304	0	-	102423244	102423244	8553170	3	328,61,507,	0,412,553,
#Partially deleted in new
chr10	102424008	102432568	chr10:102424008-102432568	0	-	102424008	102424008	8553170	5	170,131,62,144,43,	0,255,490,640,8517,
#Partially deleted in new
chr10	102424030	102432584	chr10:102424030-102432584	0	-	102424030	102424030	8553170	5	364,62,144,84,59,	0,468,618,1084,8495,
#Deleted in new
chr10	102436511	102436584	chr10:102436511-102436584	3	+	102436511	102436511	5263520	1	73,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	102449816	102451759	chr10:102449816-102451759	1	+	102449816	102449816	8553170	3	206,144,361,	0,370,1582,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	102449830	102456297	chr10:102449830-102456297	1	+	102449830	102449830	789624	3	192,144,961,	0,356,5506,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	102449836	102451543	chr10:102449836-102451543	3	-	102450451	102451093	789624	2	1311,158,	0,1549,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	102449852	102456293	chr10:102449852-102456293	1	+	102449852	102449852	789624	5	170,174,157,98,957,	0,334,1546,2237,5484,
#Partially deleted in new
chr10	102450192	102461106	chr10:102450192-102461106	3	+	102450192	102450192	8553170	3	138,91,216,	0,5144,10698,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	102450553	102455883	chr10:102450553-102455883	1	+	102450553	102450553	8553170	2	84,547,	0,4783,
#Deleted in new
chr10	102450630	102451441	chr10:102450630-102451441	1	+	102450630	102450630	8553170	2	388,43,	0,768,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	102451601	102453539	chr10:102451601-102453539	0	+	102451601	102451601	8553170	1	1938,	0,
#Duplicated in new
chr10	102453839	102456292	chr10:102453839-102456292	0	+	102453839	102453839	8553170	1	2453,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	102461394	102477045	chr10:102461394-102477045	3	+	102469029	102475984	789624	10	56,106,243,83,453,124,97,172,194,1324,	0,4587,7560,8598,9270,9878,11459,12175,12424,14327,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	102461412	102472250	chr10:102461412-102472250	1	+	102469029	102472108	789624	6	38,106,243,83,124,229,	0,4569,7542,8580,9860,10609,
#Partially deleted in new
chr10	102461880	102502709	chr10:102461880-102502709	0	-	102472972	102502647	789624	8	180,147,217,125,126,76,65,110,	0,10954,22279,23728,26269,27182,28668,40719,
#Partially deleted in new
chr10	102465980	102470026	chr10:102465980-102470026	0	+	102469029	102470026	789624	5	107,46,90,243,34,	0,2306,2772,2974,4012,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	102466017	102468640	chr10:102466017-102468640	0	+	102466017	102466017	8553170	2	70,354,	0,2269,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	102471025	102472247	chr10:102471025-102472247	0	+	102471025	102471025	8553170	3	92,124,226,	0,247,996,
#Partially deleted in new
chr10	102479228	102502711	chr10:102479228-102502711	3	-	102480862	102502647	789624	11	1737,41,62,175,93,217,125,126,76,65,112,	0,1903,2608,2772,3782,4931,6380,8921,9834,11320,23371,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	102479229	102483680	chr10:102479229-102483680	0	-	102479229	102479229	8553170	4	1736,41,62,1680,	0,1902,2607,2771,
#Partially deleted in new
chr10	102479236	102502678	chr10:102479236-102502678	1	-	102480932	102502647	789624	10	1729,41,175,93,217,125,126,76,65,79,	0,1895,2764,3774,4923,6372,8913,9826,11312,23363,
#Partially deleted in new
chr10	102480794	102484374	chr10:102480794-102484374	0	-	102480794	102480794	8553170	4	171,41,93,215,	0,337,2216,3365,
#Partially deleted in new
chr10	102483013	102502654	chr10:102483013-102502654	0	-	102483013	102483013	8553170	6	90,217,125,126,76,55,	0,1146,2595,5136,6049,19586,
#Partially deleted in new
chr10	102483038	102483559	chr10:102483038-102483559	3	+	102483038	102483038	8553170	1	521,	0,
#Partially deleted in new
chr10	102484073	102488233	chr10:102484073-102488233	0	-	102484073	102484073	8553170	3	303,125,84,	0,1535,4076,
#Partially deleted in new
chr10	102503986	102633535	chr10:102503986-102633535	3	+	102504152	102630155	0	12	348,135,137,143,86,73,154,112,135,139,69,3470,	0,5182,45983,88595,89649,90006,93153,95446,111281,113303,123188,126079,
#Partially deleted in new
chr10	102504006	102619462	chr10:102504006-102619462	1	+	102504152	102619071	0	11	328,135,137,143,86,73,154,112,135,139,397,	0,5162,45963,88575,89629,89986,93133,95426,111261,113283,115059,
#Partially deleted in new
chr10	102504078	102618659	chr10:102504078-102618659	1	+	102504152	102617578	0	10	256,135,137,143,86,73,154,112,135,1370,	0,5090,45891,88503,89557,89914,93061,95354,111189,113211,
#Deleted in new
chr10	102572756	102573225	chr10:102572756-102573225	7	-	102572756	102572756	16724991	1	469,	0,
#Partially deleted in new
chr10	102590808	102599543	chr10:102590808-102599543	0	+	102590808	102590808	8553170	6	236,143,86,73,154,111,	0,1773,2827,3184,6331,8624,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	102591523	102591630	chr10:102591523-102591630	3	+	102591523	102591523	8553170	1	107,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	102642309	102660680	chr10:102642309-102660680	3	+	102644617	102657354	789624	6	2878,96,234,32,116,3934,	0,12343,12770,13796,13960,14437,
#Deleted in new
chr10	102642791	102644140	chr10:102642791-102644140	3	-	102642791	102642791	8553170	1	1349,	0,
#Partially deleted in new
chr10	102644494	102658262	chr10:102644494-102658262	1	+	102644617	102656519	789624	5	693,96,234,32,1993,	0,10158,10585,11611,11775,
#Partially deleted in new
chr10	102644836	102657908	chr10:102644836-102657908	0	+	102644836	102656308	789624	6	351,96,234,32,138,1162,	0,9816,10243,11269,11411,11910,
#Partially deleted in new
chr10	102644886	102656946	chr10:102644886-102656946	0	+	102644886	102656946	789624	5	301,234,32,116,200,	0,10193,11219,11383,11860,
#Partially deleted in new
chr10	102645005	102658191	chr10:102645005-102658191	0	+	102645005	102656308	789624	6	182,96,234,32,141,1445,	0,9647,10074,11100,11239,11741,
#Partially deleted in new
chr10	102645007	102657101	chr10:102645007-102657101	0	+	102645007	102657101	789624	7	180,96,234,32,116,174,68,	0,9645,10072,11098,11262,11739,12026,
#Partially deleted in new
chr10	102645252	102656893	chr10:102645252-102656893	0	+	102645252	102645252	8553170	6	151,96,234,32,116,147,	0,9400,9827,10853,11017,11494,
#Partially deleted in new
chr10	102645696	102656828	chr10:102645696-102656828	0	+	102645696	102645696	8553170	6	125,96,234,32,116,82,	0,8956,9383,10409,10573,11050,
#Partially deleted in new
chr10	102649211	102656969	chr10:102649211-102656969	0	+	102649211	102649211	8553170	6	67,96,234,32,116,223,	0,5441,5868,6894,7058,7535,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	102653460	102657029	chr10:102653460-102657029	0	+	102653460	102653460	8553170	4	1288,234,32,760,	0,1619,2645,2809,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	102653964	102658299	chr10:102653964-102658299	0	+	102653964	102653964	8553170	4	1349,32,116,1553,	0,2141,2305,2782,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	102654043	102658045	chr10:102654043-102658045	0	+	102654043	102654043	8553170	5	705,234,32,116,1299,	0,1036,2062,2226,2703,
#Partially deleted in new
chr10	102654687	102658315	chr10:102654687-102658315	0	+	102654687	102658062	789624	5	61,234,32,116,393,	0,392,1418,1582,3235,
#Partially deleted in new
chr10	102655100	102658318	chr10:102655100-102658318	0	+	102655100	102658062	789624	3	213,32,269,	0,1005,2949,
#Partially deleted in new
chr10	102655162	102656868	chr10:102655162-102656868	0	+	102655162	102656806	789624	4	151,32,116,112,	0,943,1107,1594,
#Partially deleted in new
chr10	102673730	102714407	chr10:102673730-102714407	3	-	102676893	102714275	789624	6	3211,186,51,117,144,135,	0,12085,16162,25642,31615,40542,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	102714539	102743492	chr10:102714539-102743492	3	+	102726636	102737762	789624	12	142,186,171,99,76,86,61,67,50,50,48,5830,	0,12072,12447,13891,14779,15183,17183,17612,18319,19014,21322,23123,
#Partially deleted in new
chr10	102714600	102728576	chr10:102714600-102728576	0	+	102714600	102714600	8553170	4	81,186,171,146,	0,12011,12386,13830,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	102714626	102739195	chr10:102714626-102739195	0	+	102726636	102732889	789624	9	55,123,186,171,99,50,50,48,1533,	0,1962,11985,12360,13804,18232,18927,21235,23036,
#Partially deleted in new
chr10	102714630	102728511	chr10:102714630-102728511	0	+	102726636	102727681	789624	5	51,186,171,117,81,	0,11981,12356,13044,13800,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	102714635	102739189	chr10:102714635-102739189	0	+	102724967	102729798	789624	10	46,61,186,171,99,86,50,50,48,1527,	0,10300,11976,12351,13795,15087,18223,18918,21226,23027,
#Partially deleted in new
chr10	102714635	102728485	chr10:102714635-102728485	0	+	102716327	102728485	789624	5	46,96,186,171,55,	0,1598,11976,12351,13795,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	102714635	102728503	chr10:102714635-102728503	0	+	102726636	102728503	789624	5	46,106,186,171,73,	0,587,11976,12351,13795,
#Partially deleted in new
chr10	102714658	102729506	chr10:102714658-102729506	0	+	102714658	102714658	8553170	5	23,186,171,99,188,	0,11953,12328,13772,14660,
#Partially deleted in new
chr10	102726499	102729392	chr10:102726499-102729392	0	+	102726636	102729392	789624	4	298,171,99,74,	0,487,1931,2819,
#Partially deleted in new
chr10	102743900	102813514	chr10:102743900-102813514	1	+	102744053	102813331	789624	4	243,103,162,920,	0,54092,65992,68694,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	102743981	102833848	chr10:102743981-102833848	0	+	102744053	102822032	8553170	8	162,103,162,87,524,117,211,2251,	0,54011,65911,77235,77827,82972,86754,87616,
#Partially deleted in new
chr10	102776248	102816267	chr10:102776248-102816267	3	+	102776390	102813331	789624	4	169,103,162,3673,	0,21744,33644,36346,
#Deleted in new
chr10	102803928	102804031	chr10:102803928-102804031	3	+	102803928	102803928	8553170	1	103,	0,
#Partially deleted in new
chr10	102830530	102837533	chr10:102830530-102837533	3	-	102830701	102837361	0	8	455,104,170,216,87,230,139,469,	0,977,1980,2462,3505,4254,4723,6534,
#Partially deleted in new
chr10	102830530	102837472	chr10:102830530-102837472	1	-	102830701	102837361	789624	6	455,104,170,230,139,408,	0,977,1980,4254,4723,6534,
#Partially deleted in new
chr10	102830530	102837472	chr10:102830530-102837472	1	-	102830701	102837361	789624	7	455,104,170,216,230,139,408,	0,977,1980,2462,4254,4723,6534,
#Partially deleted in new
chr10	102830604	102836772	chr10:102830604-102836772	0	-	102830604	102830604	8553170	8	381,104,170,216,87,230,139,59,	0,903,1906,2388,3431,4180,4649,6109,
#Partially deleted in new
chr10	102830606	102837422	chr10:102830606-102837422	1	-	102830701	102837361	789624	5	379,104,170,216,358,	0,901,1904,2386,6458,
#Partially deleted in new
chr10	102830608	102837422	chr10:102830608-102837422	1	-	102830701	102837361	789624	8	377,107,170,216,87,230,139,358,	0,899,1902,2384,3427,4176,4645,6456,
#Deleted in new
chr10	102830947	102831703	chr10:102830947-102831703	0	-	102830947	102830947	8553170	2	38,196,	0,560,
#Partially deleted in new
chr10	102832720	102834516	chr10:102832720-102834516	0	+	102832720	102832720	8553170	2	151,340,	0,1456,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	102833474	102837414	chr10:102833474-102837414	0	-	102833474	102833474	8553170	3	1540,340,350,	0,1779,3590,
#Partially deleted in new
chr10	102838010	102845473	chr10:102838010-102845473	7	-	102838010	102838010	16724991	2	99,290,	0,7173,
#Deleted in new
chr10	102845594	102845950	chr10:102845594-102845950	7	+	102845594	102845594	16724991	1	356,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	102845915	102854513	chr10:102845915-102854513	3	-	102845915	102845915	8553170	3	226,98,259,	0,5592,8339,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	102845982	102854512	chr10:102845982-102854512	1	-	102845982	102845982	8553170	2	321,258,	0,8272,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	102854222	102864961	chr10:102854222-102864961	3	+	102854286	102862924	789624	5	205,63,44,21,2089,	0,6109,6275,7937,8650,
#Partially deleted in new
chr10	102854261	102864213	chr10:102854261-102864213	1	+	102854286	102862924	789624	6	166,63,44,21,60,484,	0,6070,6236,7898,8611,9468,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr10	102854271	102901899	chr10:102854271-102901899	3	+	102854286	102862924	789624	15	156,63,44,21,60,41,128,151,137,70,82,132,143,135,1307,	0,6060,6226,7888,8601,15533,15812,18176,18825,20320,22682,24107,24577,36272,46321,
#Partially deleted in new
chr10	102854408	102860827	chr10:102854408-102860827	0	+	102854408	102854408	8553170	3	19,63,330,	0,5923,6089,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	102868420	102868519	chr10:102868420-102868519	3	+	102868420	102868420	8553170	1	99,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	102869515	102901899	chr10:102869515-102901899	3	+	102869592	102900700	789624	11	78,41,128,151,137,70,82,132,143,135,1307,	0,289,568,2932,3581,5076,7438,8863,9333,21028,31077,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	102869515	102901894	chr10:102869515-102901894	1	+	102869592	102890676	789624	13	78,41,128,151,137,70,82,132,143,111,23,207,420,	0,289,568,2932,3581,5076,7438,8863,9333,21028,21140,31077,31959,
#Deleted in new
chr10	102887873	102888188	chr10:102887873-102888188	7	-	102887873	102887873	16724991	1	315,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	102914584	102915404	chr10:102914584-102915404	3	+	102914584	102914584	8553170	1	820,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	102918292	103090221	chr10:102918292-103090221	3	+	102918480	103077180	0	8	1809,144,138,170,94,66,185,13251,	0,131414,136036,138502,150336,153481,157793,158678,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	102918316	102927618	chr10:102918316-102927618	1	+	102918480	102927382	0	2	1785,274,	0,9028,
#Partially deleted in new
chr10	102918356	103078351	chr10:102918356-103078351	1	+	102918480	103077180	0	7	1745,144,138,170,94,185,1381,	0,131350,135972,138438,150272,157729,158614,
#Partially deleted in new
chr10	103027335	103027498	chr10:103027335-103027498	3	+	103027335	103027335	8553170	1	163,	0,
#Partially deleted in new
chr10	103068435	103077029	chr10:103068435-103077029	0	+	103068435	103068435	8553170	3	287,185,59,	0,7650,8535,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr10	103088016	103174982	chr10:103088016-103174982	1	-	103089671	103174958	0	17	1892,177,61,52,171,67,108,42,84,54,94,58,92,96,118,74,125,	0,2594,2919,3547,5122,5955,6331,7922,9274,10914,11909,13028,13218,17689,18572,51389,86841,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr10	103088017	103193306	chr10:103088017-103193306	3	-	103089671	103174958	0	18	1891,177,61,52,171,67,108,42,84,54,94,58,92,96,118,74,125,71,	0,2593,2918,3546,5121,5954,6330,7921,9273,10913,11908,13027,13217,17688,18571,51388,86840,105218,
#Partially deleted in new
chr10	103088916	103193272	chr10:103088916-103193272	0	-	103088916	103088916	8553170	19	992,177,61,52,171,67,108,42,84,54,94,281,58,92,24,96,61,74,37,	0,1694,2019,2647,4222,5055,5431,7022,8374,10014,11009,11746,12128,12318,16441,16789,22828,50489,104319,
#Partially deleted in new
chr10	103089840	103094368	chr10:103089840-103094368	0	-	103089840	103094368	789624	6	68,61,52,171,67,21,	0,1095,1723,3298,4131,4507,
#Deleted in new
chr10	103093731	103094535	chr10:103093731-103094535	0	-	103093731	103093731	8553170	2	307,188,	0,616,
#Partially deleted in new
chr10	103097290	103193272	chr10:103097290-103193272	0	-	103097290	103174958	789624	11	84,54,94,58,92,24,96,118,74,125,37,	0,1640,2635,3754,3944,8067,8415,9298,42115,77567,95945,
#Partially deleted in new
chr10	103097307	103193298	chr10:103097307-103193298	0	-	103111791	103174958	789624	11	67,54,94,58,92,96,118,61,74,125,63,	0,1623,2618,3737,3927,8398,9281,14437,42098,77550,95928,
#Partially deleted in new
chr10	103097971	103106650	chr10:103097971-103106650	0	-	103098043	103106650	789624	8	117,54,94,58,92,24,96,62,	0,959,1954,3073,3263,7386,7734,8617,
#Partially deleted in new
chr10	103098391	103105759	chr10:103098391-103105759	0	-	103098391	103098391	8553170	5	593,94,58,92,54,	0,1534,2653,2843,7314,
#Partially deleted in new
chr10	103098970	103106684	chr10:103098970-103106684	0	-	103100813	103106684	789624	7	14,94,192,58,92,96,96,	0,955,1781,2074,2264,6735,7618,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	103099925	103140192	chr10:103099925-103140192	0	-	103099925	103099925	8553170	8	94,58,92,96,118,61,74,76,	0,1119,1309,5780,6663,11819,39480,40191,
#Partially deleted in new
chr10	103100867	103106687	chr10:103100867-103106687	0	-	103100867	103100867	8553170	5	76,58,92,96,99,	0,177,367,4838,5721,
#Partially deleted in new
chr10	103111744	103193298	chr10:103111744-103193298	1	-	103111771	103174958	789624	3	61,125,63,	0,63113,81491,
#Deleted in new
chr10	103125016	103125416	chr10:103125016-103125416	7	-	103125016	103125016	16724991	1	400,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	103169283	103181320	chr10:103169283-103181320	0	-	103169283	103169283	8553170	3	166,125,136,	0,5574,11901,
#Partially deleted in new
chr10	103175553	103176094	chr10:103175553-103176094	7	+	103175553	103175553	16724991	1	541,	0,
#Partially deleted in new
chr10	103215708	103216800	chr10:103215708-103216800	7	+	103215708	103215708	16724991	1	1092,	0,
#Deleted in new
chr10	103245886	103248016	chr10:103245886-103248016	3	+	103245996	103246683	789624	1	2130,	0,
#Partially deleted in new
chr10	103277162	103290351	chr10:103277162-103290351	3	+	103277211	103288669	789624	3	1114,125,1992,	0,9872,11197,
#Partially deleted in new
chr10	103302795	103351079	chr10:103302795-103351079	1	-	103303904	103351066	0	7	1166,87,99,28,97,100,373,	0,11390,23738,31129,45920,46104,47911,
#Partially deleted in new
chr10	103302795	103351134	chr10:103302795-103351134	3	-	103303904	103351066	0	10	1166,87,99,28,109,60,56,97,100,428,	0,11390,23738,31129,42228,44442,44599,45920,46104,47911,
#Partially deleted in new
chr10	103303126	103351081	chr10:103303126-103351081	0	-	103303126	103303126	8553170	10	835,87,99,28,109,82,56,97,100,375,	0,11059,23407,30798,41897,44111,44268,45589,45773,47580,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	103303127	103351144	chr10:103303127-103351144	0	-	103347275	103351066	8553170	10	834,87,99,117,28,268,60,97,100,438,	0,11058,23406,27124,30797,36374,44110,45588,45772,47579,
#Partially deleted in new
chr10	103312435	103312568	chr10:103312435-103312568	3	-	103312435	103312435	8553170	1	133,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	103348354	103348939	chr10:103348354-103348939	0	-	103348354	103348354	8553170	2	458,40,	0,545,
#Partially deleted in new
chr10	103367966	103389065	chr10:103367966-103389065	3	+	103367989	103388223	0	11	582,238,316,164,136,121,130,165,178,178,1060,	0,5391,10268,11641,11917,13754,15271,17359,19208,19554,20039,
#Partially deleted in new
chr10	103389040	103396492	chr10:103389040-103396492	3	-	103392193	103392457	789624	6	126,93,96,196,287,84,	0,3150,3330,5158,6705,7368,
#Partially deleted in new
chr10	103389049	103396466	chr10:103389049-103396466	1	-	103392193	103392457	789624	4	117,93,96,58,	0,3141,3321,7359,
#Partially deleted in new
chr10	103389049	103396466	chr10:103389049-103396466	1	-	103392193	103392457	789624	5	117,93,96,196,58,	0,3141,3321,5149,7359,
#Partially deleted in new
chr10	103389049	103396074	chr10:103389049-103396074	1	-	103392193	103392457	789624	4	117,93,96,329,	0,3141,3321,6696,
#Partially deleted in new
chr10	103389049	103396441	chr10:103389049-103396441	1	-	103392193	103392457	789624	5	117,93,96,287,33,	0,3141,3321,6696,7359,
#Deleted in new
chr10	103394252	103394401	chr10:103394252-103394401	3	-	103394252	103394252	5263520	1	149,	0,
#Partially deleted in new
chr10	103396625	103446281	chr10:103396625-103446281	1	+	103398426	103445549	8553170	36	105,113,132,168,162,124,182,108,207,125,61,147,252,141,195,171,220,150,116,542,63,106,90,103,178,57,123,123,292,117,150,251,169,154,166,904,	0,1790,3771,6492,8396,9359,9983,13073,16490,17340,17644,18379,19865,21166,21814,22912,24722,26362,26917,28358,30703,35503,37322,37622,38172,41389,42060,43120,43664,44108,45200,45584,46539,47289,47891,48752,
#Partially deleted in new
chr10	103396647	103446292	chr10:103396647-103446292	3	+	103398426	103445549	0	36	83,113,132,168,162,124,182,108,207,125,61,147,252,141,195,171,220,150,116,542,63,106,90,103,178,57,123,123,292,117,150,248,169,154,166,915,	0,1768,3749,6470,8374,9337,9961,13051,16468,17318,17622,18357,19843,21144,21792,22890,24700,26340,26895,28336,30681,35481,37300,37600,38150,41367,42038,43098,43642,44086,45178,45565,46517,47267,47869,48730,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	103396649	103405075	chr10:103396649-103405075	0	+	103398426	103399661	789624	6	81,113,184,132,168,54,	0,1766,2997,3747,6468,8372,
#Partially deleted in new
chr10	103403226	103405372	chr10:103403226-103405372	0	+	103403226	103403226	8553170	2	59,351,	0,1795,
#Deleted in new
chr10	103422724	103425090	chr10:103422724-103425090	0	+	103422724	103422724	8553170	3	413,116,107,	0,818,2259,
#Deleted in new
chr10	103433992	103434702	chr10:103433992-103434702	0	+	103433992	103433992	8553170	2	45,455,	0,255,
#Deleted in new
chr10	103444312	103445724	chr10:103444312-103445724	0	+	103444312	103444312	8553170	2	370,347,	0,1065,
#Partially deleted in new
chr10	103446785	103452402	chr10:103446785-103452402	3	-	103447151	103449941	789624	4	783,713,100,247,	0,2601,4297,5370,
#Partially deleted in new
chr10	103446788	103452318	chr10:103446788-103452318	1	-	103447151	103449941	789624	4	780,713,203,163,	0,2598,4294,5367,
#Deleted in new
chr10	103449624	103451572	chr10:103449624-103451572	0	-	103449624	103449624	8553170	2	475,490,	0,1458,
#Deleted in new
chr10	103449698	103452336	chr10:103449698-103452336	0	-	103449698	103449698	8553170	3	236,158,181,	0,2180,2457,
#Deleted in new
chr10	103450024	103452287	chr10:103450024-103452287	0	-	103450024	103450024	8553170	2	776,132,	0,2131,
#Deleted in new
chr10	103450195	103450852	chr10:103450195-103450852	3	+	103450195	103450195	8553170	1	657,	0,
#Deleted in new
chr10	103450295	103452391	chr10:103450295-103452391	0	-	103450295	103450295	8553170	3	505,203,236,	0,787,1860,
#Deleted in new
chr10	103450411	103451588	chr10:103450411-103451588	0	-	103450411	103450411	8553170	2	389,506,	0,671,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	103452845	103462695	chr10:103452845-103462695	3	+	103452845	103452845	8553170	2	391,266,	0,9584,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	103453386	103458888	chr10:103453386-103458888	3	-	103455261	103458751	789624	2	2361,692,	0,4810,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	103472803	103479240	chr10:103472803-103479240	3	-	103473212	103479032	789624	3	901,256,495,	0,3490,5942,
#Partially deleted in new
chr10	103479602	103517393	chr10:103479602-103517393	3	-	103479602	103479602	789624	4	395,175,62,8,	0,14958,35738,37783,
#Partially deleted in new
chr10	103493978	103592552	chr10:103493978-103592552	3	+	103494387	103590372	789624	6	494,242,322,690,147,2419,	0,76893,77522,90557,95535,96155,
#Partially deleted in new
chr10	103511778	103515402	chr10:103511778-103515402	1	-	103511778	103511778	8553170	2	377,62,	0,3562,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	103549074	103550964	chr10:103549074-103550964	3	+	103549074	103549074	8553170	2	78,446,	0,1444,
#Partially deleted in new
chr10	103555231	103571822	chr10:103555231-103571822	0	+	103555379	103571822	789624	3	182,242,322,	0,15640,16269,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	103558084	103571722	chr10:103558084-103571722	0	+	103571011	103571722	789624	3	164,242,222,	0,12787,13416,
#Partially deleted in new
chr10	103571676	103577902	chr10:103571676-103577902	0	+	103571676	103571676	8553170	2	146,301,	0,5925,
#Partially deleted in new
chr10	103594026	103855543	chr10:103594026-103855543	1	-	103601815	103855266	0	15	9763,120,50,338,118,84,114,132,45,29,92,77,76,81,349,	0,11771,17554,18826,23170,28443,33062,66956,74581,99001,130243,141705,173067,207255,261168,
#Partially deleted in new
chr10	103594028	103855406	chr10:103594028-103855406	3	-	103601815	103855266	0	14	9761,120,50,338,118,114,132,45,29,92,77,76,81,212,	0,11769,17552,18824,23168,33060,66954,74579,98999,130241,141703,173065,207253,261166,
#Partially deleted in new
chr10	103601745	103801297	chr10:103601745-103801297	0	-	103601815	103801297	789624	13	2044,120,50,338,118,114,132,45,29,92,77,76,16,	0,4052,9835,11107,15451,25343,59237,66862,91282,122524,133986,165348,199536,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	103608618	103610050	chr10:103608618-103610050	3	+	103608618	103608618	8553170	1	1432,	0,
#Deleted in new
chr10	103673157	103673265	chr10:103673157-103673265	3	+	103673157	103673157	8553170	1	108,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	103745965	103755423	chr10:103745965-103755423	3	+	103745965	103745965	8553170	4	194,114,139,1580,	0,1017,3816,7878,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	103746792	103754466	chr10:103746792-103754466	0	+	103746792	103746792	789624	3	304,139,623,	0,2989,7051,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	103877373	103879761	chr10:103877373-103879761	3	-	103877373	103877373	8553170	1	2388,	0,
#Partially deleted in new
chr10	103882541	103918205	chr10:103882541-103918205	3	-	103882683	103917594	0	10	300,73,123,172,124,162,66,96,195,106,	0,6530,9588,15006,16335,17520,22549,27985,34920,35558,
#Partially deleted in new
chr10	103882554	103917669	chr10:103882554-103917669	1	-	103882683	103917594	0	9	287,73,123,172,124,162,66,96,208,	0,6517,9575,14993,16322,17507,22536,27972,34907,
#Partially deleted in new
chr10	103882554	103918130	chr10:103882554-103918130	0	-	103882554	103882554	8553170	11	287,73,123,172,85,124,162,66,96,195,31,	0,6517,9575,14993,15738,16322,17507,22536,27972,34907,35545,
#Partially deleted in new
chr10	103882744	103900153	chr10:103882744-103900153	0	-	103882744	103882744	8553170	6	97,73,123,172,124,194,	0,6327,9385,14803,16132,17215,
#Partially deleted in new
chr10	103967200	104029233	chr10:103967200-104029233	1	+	103967745	104025720	0	18	695,165,49,150,73,195,82,129,1356,131,124,180,130,125,189,126,114,3660,	0,23474,25397,25783,31698,31918,32666,34243,34971,38360,38711,40976,50959,51583,52533,53287,54419,58373,
#Partially deleted in new
chr10	103967200	104029233	chr10:103967200-104029233	3	+	103967745	104025720	0	19	695,165,49,150,73,195,82,129,1356,131,124,180,93,130,125,189,126,114,3660,	0,23474,25397,25783,31698,31918,32666,34243,34971,38360,38711,40976,43615,50959,51583,52533,53287,54419,58373,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	103974514	103974814	chr10:103974514-103974814	3	-	103974514	103974514	8553170	1	300,	0,
#Partially deleted in new
chr10	104008197	104019116	chr10:104008197-104019116	0	+	104008197	104008197	8553170	3	159,130,333,	0,9962,10586,
#Partially deleted in new
chr10	104031285	104085957	chr10:104031285-104085957	3	-	104032234	104080673	789624	56	1005,81,63,138,390,147,111,90,141,69,138,123,51,75,33,27,60,54,42,54,36,81,36,36,27,72,36,63,36,36,54,36,63,105,63,27,27,30,222,198,45,81,162,69,72,72,159,144,48,36,48,129,105,45,63,235,	0,1388,1620,1952,2659,3335,3977,4188,5206,5759,6350,7120,7785,8159,8322,8687,9065,9779,10017,10199,11134,12215,12539,14472,15461,16453,16783,18123,18803,19335,19562,20195,20869,21745,22634,22806,23695,24086,24496,25689,26860,28352,28833,30119,30972,32461,33152,39140,40746,41924,42898,45015,46136,47256,49336,54437,
#Partially deleted in new
chr10	104031285	104080673	chr10:104031285-104080673	1	-	104032234	104080673	789624	51	1005,81,63,138,390,147,90,141,69,138,123,51,60,54,42,54,36,81,36,36,27,72,36,63,36,36,54,36,63,105,63,27,27,30,222,198,45,81,162,69,72,72,159,144,48,36,48,129,105,45,52,	0,1388,1620,1952,2659,3335,4188,5206,5759,6350,7120,7785,9065,9779,10017,10199,11134,12215,12539,14472,15461,16453,16783,18123,18803,19335,19562,20195,20869,21745,22634,22806,23695,24086,24496,25689,26860,28352,28833,30119,30972,32461,33152,39140,40746,41924,42898,45015,46136,47256,49336,
#Deleted in new
chr10	104031287	104032968	chr10:104031287-104032968	0	-	104032234	104032968	789624	4	306,87,81,63,	0,916,1386,1618,
#Partially deleted in new
chr10	104031287	104085880	chr10:104031287-104085880	1	-	104032234	104080673	789624	56	1003,81,63,138,390,147,111,90,141,69,138,123,51,75,33,27,60,54,42,54,36,81,36,36,27,72,36,63,36,36,54,36,63,105,63,27,27,30,222,198,45,81,162,69,72,72,159,144,48,36,48,129,105,45,63,158,	0,1386,1618,1950,2657,3333,3975,4186,5204,5757,6348,7118,7783,8157,8320,8685,9063,9777,10015,10197,11132,12213,12537,14470,15459,16451,16781,18121,18801,19333,19560,20193,20867,21743,22632,22804,23693,24084,24494,25687,26858,28350,28831,30117,30970,32459,33150,39138,40744,41922,42896,45013,46134,47254,49334,54435,
#Deleted in new
chr10	104031349	104034130	chr10:104031349-104034130	0	-	104033601	104034130	8553170	5	941,81,63,369,186,	0,1324,1556,1888,2595,
#Deleted in new
chr10	104048088	104048186	chr10:104048088-104048186	3	-	104048088	104048088	5263520	1	98,	0,
#Partially deleted in new
chr10	104053109	104085814	chr10:104053109-104085814	0	-	104053109	104080673	8553170	22	26,63,27,27,30,222,198,45,81,162,69,72,72,159,144,48,36,129,105,45,63,92,	0,810,982,1871,2262,2672,3865,5036,6528,7009,8295,9148,10637,11328,17316,18922,20100,23191,24312,25432,27512,32613,
#Deleted in new
chr10	104055175	104055969	chr10:104055175-104055969	0	-	104055175	104055175	8553170	2	226,188,	0,606,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr10	104059316	104085778	chr10:104059316-104085778	1	-	104059605	104080673	789624	15	402,162,69,72,72,159,144,48,36,48,129,105,45,63,56,	0,802,2088,2941,4430,5121,11109,12715,13893,14867,16984,18105,19225,21305,26406,
#Deleted in new
chr10	104059684	104064548	chr10:104059684-104064548	0	-	104060252	104064548	8553170	7	34,162,69,72,106,72,111,	0,434,1720,2573,3853,4062,4753,
#Partially deleted in new
chr10	104063186	104085826	chr10:104063186-104085826	0	-	104063186	104063186	8553170	11	632,159,144,48,36,48,129,105,45,63,104,	0,1251,7239,8845,10023,10997,13114,14235,15355,17435,22536,
#Partially deleted in new
chr10	104070460	104080654	chr10:104070460-104080654	0	-	104074011	104080654	8553170	9	109,48,36,69,48,129,105,45,33,	0,1571,2749,3490,3723,5840,6961,8081,10161,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	104122057	104126385	chr10:104122057-104126385	1	+	104122990	104125704	789624	4	97,122,411,873,	0,907,1656,3455,
#Deleted in new
chr10	104122057	104123363	chr10:104122057-104123363	0	+	104122057	104122057	8553170	2	97,399,	0,907,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	104122164	104126385	chr10:104122164-104126385	3	+	104122183	104125704	789624	4	32,122,411,873,	0,800,1549,3348,
#Partially deleted in new
chr10	104129887	104232362	chr10:104129887-104232362	3	-	104130138	104232246	789624	38	418,154,81,165,160,113,214,89,87,108,120,126,81,87,207,231,117,105,126,78,93,148,131,150,173,141,104,149,81,117,132,68,160,151,168,97,254,181,	0,1443,2228,3732,10954,12393,13538,15588,16375,18003,22719,31149,32073,32429,34206,36600,37733,38856,42522,49141,49952,52478,55128,56086,57432,58382,62311,63978,66965,68034,73784,76075,77777,82119,84371,95573,100702,102294,
#Partially deleted in new
chr10	104129888	104161122	chr10:104129888-104161122	0	-	104130138	104161122	789624	12	417,154,81,165,160,113,214,89,87,108,120,86,	0,1442,2227,3731,10953,12392,13537,15587,16374,18002,22718,31148,
#Partially deleted in new
chr10	104129933	104186065	chr10:104129933-104186065	0	-	104130138	104186065	789624	23	372,154,81,165,160,113,214,89,108,120,126,81,87,207,231,117,105,126,78,93,148,131,92,	0,1397,2182,3686,10908,12347,13492,15542,17957,22673,31103,32027,32383,34160,36554,37687,38810,42476,49095,49906,52432,55082,56040,
#Partially deleted in new
chr10	104133453	104142315	chr10:104133453-104142315	0	-	104133453	104133453	8553170	3	331,160,35,	0,7388,8827,
#Partially deleted in new
chr10	104167584	104232362	chr10:104167584-104232362	1	-	104167608	104230698	789624	22	153,105,126,78,93,148,131,150,173,141,104,149,81,117,132,71,160,151,168,97,254,181,	0,1159,4825,11444,12255,14781,17431,18389,19735,20685,24614,26281,29268,30337,36087,38378,40080,44422,46674,57876,63005,64597,
#Partially deleted in new
chr10	104192493	104232305	chr10:104192493-104232305	1	-	104193861	104230698	789624	11	1521,81,117,132,71,160,151,168,97,254,124,	0,4359,5428,11178,13469,15171,19513,21765,32967,38096,39688,
#Partially deleted in new
chr10	104203429	104232340	chr10:104203429-104232340	1	-	104203647	104230698	789624	8	374,71,160,151,168,97,254,159,	0,2533,4235,8577,10829,22031,27160,28752,
#Deleted in new
chr10	104218788	104218883	chr10:104218788-104218883	3	-	104218788	104218788	5263520	1	95,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	104254163	104266190	chr10:104254163-104266190	0	+	104254163	104254163	8553170	5	336,109,223,99,107,	0,999,5412,8815,11920,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	104254193	104267459	chr10:104254193-104267459	1	+	104255212	104267405	0	6	306,109,223,99,107,208,	0,969,5382,8785,11890,13058,
#Partially deleted in new
chr10	104254709	104267459	chr10:104254709-104267459	1	+	104254928	104267405	0	5	253,109,223,107,208,	0,453,4866,11374,12542,
#Partially deleted in new
chr10	104254734	104267457	chr10:104254734-104267457	3	+	104254928	104267405	0	6	228,109,223,99,107,206,	0,428,4841,8244,11349,12517,
#Partially deleted in new
chr10	104254985	104267365	chr10:104254985-104267365	0	+	104255212	104267365	789624	5	286,223,99,107,114,	0,4590,7993,11098,12266,
#Partially deleted in new
chr10	104255162	104267404	chr10:104255162-104267404	0	+	104255212	104267404	789624	4	109,223,107,153,	0,4413,10921,12089,
#Deleted in new
chr10	104268335	104268405	chr10:104268335-104268405	3	-	104268335	104268335	5263520	1	70,	0,
#Partially deleted in new
chr10	104268872	104299417	chr10:104268872-104299417	1	+	104274915	104299284	0	6	397,265,109,223,107,290,	0,5812,6353,9021,28705,30255,
#Partially deleted in new
chr10	104269180	104299411	chr10:104269180-104299411	3	+	104274915	104299284	0	7	89,265,109,223,102,107,284,	0,5504,6045,8713,10189,28397,29947,
#Partially deleted in new
chr10	104274897	104299414	chr10:104274897-104299414	0	+	104274897	104274897	8553170	4	52,223,107,287,	0,2996,22680,24230,
#Partially deleted in new
chr10	104274919	104291644	chr10:104274919-104291644	0	+	104274919	104274919	8553170	7	30,223,102,56,106,89,157,	0,2974,4450,11015,13463,16335,16568,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	104275161	104304945	chr10:104275161-104304945	1	+	104275275	104299284	0	5	173,223,102,107,5818,	0,2732,4208,22416,23966,
#Partially deleted in new
chr10	104285937	104299418	chr10:104285937-104299418	0	+	104285937	104285937	8553170	4	53,125,107,291,	0,9047,11640,13190,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	104295274	104299411	chr10:104295274-104299411	0	+	104295274	104295274	8553170	2	2410,284,	0,3853,
#Partially deleted in new
chr10	104309697	104333905	chr10:104309697-104333905	1	-	104314407	104316051	789624	3	6367,161,279,	0,23640,23929,
#Partially deleted in new
chr10	104312130	104338404	chr10:104312130-104338404	1	-	104314407	104316051	789624	2	3934,159,	0,26115,
#Deleted in new
chr10	104312140	104313881	chr10:104312140-104313881	3	+	104312140	104312140	8553170	2	87,157,	0,1584,
#Partially deleted in new
chr10	104312143	104328924	chr10:104312143-104328924	1	-	104314407	104316051	789624	2	3921,60,	0,16721,
#Partially deleted in new
chr10	104312156	104338448	chr10:104312156-104338448	3	-	104314407	104316051	8553170	3	3908,209,203,	0,22632,26089,
#Partially deleted in new
chr10	104315708	104333905	chr10:104315708-104333905	0	-	104315708	104316051	789624	3	356,161,279,	0,17629,17918,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	104323368	104327004	chr10:104323368-104327004	3	+	104323368	104323368	789624	3	202,86,666,	0,569,2970,
#Deleted in new
chr10	104351590	104353575	chr10:104351590-104353575	3	-	104351590	104351590	789624	2	337,458,	0,1527,
#Partially deleted in new
chr10	104353763	104455090	chr10:104353763-104455090	3	+	104353897	104454530	789624	18	143,282,149,157,195,138,160,83,192,162,147,141,224,112,105,120,134,669,	0,4577,8259,10969,12050,14659,17131,23047,26265,38469,39565,45596,46916,49965,52925,93934,96307,100658,
#Partially deleted in new
chr10	104376854	104382360	chr10:104376854-104382360	1	+	104376854	104382173	789624	3	39,192,235,	0,3174,5271,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	104474938	104480274	chr10:104474938-104480274	3	-	104474938	104474938	789624	3	715,156,142,	0,1963,5194,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	104566971	104624795	chr10:104566971-104624795	3	+	104566971	104566971	8553170	8	52,244,120,105,126,140,170,198,	0,18385,27744,29036,30397,49042,49685,57626,
#Deleted in new
chr10	104616101	104616973	chr10:104616101-104616973	0	+	104616101	104616101	8553170	2	52,317,	0,555,
#Partially deleted in new
chr10	104641100	105265235	chr10:104641100-105265235	3	+	104641327	105263374	789624	27	854,68,100,159,74,65,119,90,180,147,103,77,92,108,118,134,114,172,187,134,124,113,132,100,106,161,1926,	0,201691,274732,336234,401954,448674,464296,498296,506516,516037,517791,523202,526157,536965,558898,560019,570036,573341,575835,582015,604441,606118,611674,614601,615718,621230,622209,
#Partially deleted in new
chr10	104641327	105265235	chr10:104641327-105265235	1	+	104641327	105263374	789624	28	620,7,68,100,159,74,65,119,90,180,147,103,77,92,108,118,134,114,172,187,134,124,113,132,100,106,161,1926,	0,180769,201464,274505,336007,401727,448447,464069,498069,506289,515810,517564,522975,525930,536738,558671,559792,569809,573114,575608,581788,604214,605891,611447,614374,615491,621003,621982,
#Deleted in new
chr10	104664607	104666200	chr10:104664607-104666200	3	-	104664607	104664607	789624	2	526,752,	0,841,
#Partially deleted in new
chr10	105158927	105211250	chr10:105158927-105211250	0	+	105158927	105211250	789624	5	67,77,92,108,114,	0,5375,8330,19138,52209,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	105534658	105534765	chr10:105534658-105534765	3	+	105534658	105534658	8553170	1	107,	0,
#Deleted in new
chr10	105685382	105685865	chr10:105685382-105685865	7	-	105685382	105685382	16724991	1	483,	0,
#Deleted in new
chr10	105686321	105687051	chr10:105686321-105687051	7	+	105686321	105686321	16724991	1	730,	0,
#Partially deleted in new
chr10	105808774	105819197	chr10:105808774-105819197	3	-	105808774	105808774	8553170	3	217,109,130,	0,9143,10293,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	106140263	106188722	chr10:106140263-106188722	3	+	106140263	106140263	789624	5	63,113,48,78,161,	0,43522,44283,46691,48298,
#Partially deleted in new
chr10	106140290	106158145	chr10:106140290-106158145	1	+	106140290	106140290	8553170	2	36,515,	0,17340,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	106163347	106188620	chr10:106163347-106188620	1	+	106163347	106163347	8553170	4	483,48,75,59,	0,21199,23610,25214,
#Partially deleted in new
chr10	106550105	106551121	chr10:106550105-106551121	7	+	106550105	106550105	16724991	2	379,82,	0,934,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr10	106573662	107164534	chr10:106573662-107164534	3	-	106577419	107164526	789624	26	3893,106,100,132,113,124,134,187,172,114,131,118,108,92,77,103,147,180,90,119,65,74,159,100,68,566,	0,5706,23688,33503,38248,44486,46765,55539,78719,94026,97574,99205,101386,103650,105593,105969,114529,125551,132882,135560,156387,187925,202871,255911,382850,590306,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr10	106573670	106956583	chr10:106573670-106956583	1	-	106577547	106776692	789624	26	3885,161,106,100,132,113,124,134,187,172,114,131,118,108,92,77,103,147,180,90,119,65,74,159,100,71,	0,5420,5698,23680,33495,38240,44478,46757,55531,78711,94018,97566,99197,101378,103642,105585,105961,114521,125543,132874,135552,156379,187917,202863,255903,382842,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr10	106573670	106956583	chr10:106573670-106956583	1	-	106577419	106776692	789624	25	3885,106,100,132,113,124,134,187,172,114,131,118,108,92,77,103,147,180,90,119,65,74,159,100,71,	0,5698,23680,33495,38240,44478,46757,55531,78711,94018,97566,99197,101378,103642,105585,105961,114521,125543,132874,135552,156379,187917,202863,255903,382842,
#Partially deleted in new
chr10	106577181	106699358	chr10:106577181-106699358	1	-	106577547	106699231	789624	19	374,161,106,100,132,113,124,134,187,172,114,131,118,108,92,77,103,147,145,	0,1909,2187,20169,29984,34729,40967,43246,52020,75200,90507,94055,95686,97867,100131,102074,102450,111010,122032,
#Partially deleted in new
chr10	106577197	106607218	chr10:106577197-106607218	0	-	106577197	106577197	8553170	4	2054,106,100,53,	0,2171,20153,29968,
#Partially deleted in new
chr10	106577198	106611987	chr10:106577198-106611987	0	-	106577220	106611987	789624	6	87,161,106,100,132,77,	0,1892,2170,20152,29967,34712,
#Partially deleted in new
chr10	106577610	106956583	chr10:106577610-106956583	1	-	106577610	106776692	789624	26	32,161,106,100,132,113,124,134,187,172,114,131,118,108,92,77,103,147,180,90,119,65,74,159,100,71,	0,1480,1758,19740,29555,34300,40538,42817,51591,74771,90078,93626,95257,97438,99702,101645,102021,110581,121603,128934,131612,152439,183977,198923,251963,378902,
#Partially deleted in new
chr10	106600266	106618274	chr10:106600266-106618274	0	-	106600266	106600266	8553170	4	455,132,113,126,	0,6899,11644,17882,
#Partially deleted in new
chr10	106620117	106629389	chr10:106620117-106629389	0	-	106620117	106620117	8553170	2	444,188,	0,9084,
#Partially deleted in new
chr10	106667083	106675089	chr10:106667083-106675089	0	-	106667083	106667083	8553170	5	225,114,131,118,41,	0,605,4153,5784,7965,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	106970020	106970150	chr10:106970020-106970150	7	+	106970020	106970020	16724991	1	130,	0,
#Deleted in new
chr10	107461559	107461669	chr10:107461559-107461669	7	+	107461559	107461559	16724991	1	110,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	107694972	108041104	chr10:107694972-108041104	1	-	107694972	107694972	8553170	6	189,203,49,79,138,56,	0,158185,159462,206036,345388,346076,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	107757832	108041194	chr10:107757832-108041194	0	-	107757832	107757832	8553170	5	236,53,79,138,146,	0,2990,143176,282528,283216,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	107760822	108041194	chr10:107760822-108041194	0	-	107760822	107760822	8553170	4	53,49,138,146,	0,93612,279538,280226,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	107805937	108041194	chr10:107805937-108041194	2	-	107805937	107805937	8553170	4	411,101,138,146,	0,6868,234423,235111,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	107844328	108041194	chr10:107844328-108041194	0	-	107844328	107844328	8553170	5	341,119,52,138,146,	0,65109,66354,196032,196720,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	107853157	108041194	chr10:107853157-108041194	0	-	107853157	107853157	8553170	7	203,49,79,83,53,138,146,	0,1277,5991,105061,105859,187203,187891,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	107871575	108069294	chr10:107871575-108069294	1	-	107871575	107871575	789624	5	178,138,146,147,113,	0,168785,169473,171602,197606,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	107962903	108041194	chr10:107962903-108041194	1	-	107962903	107962903	8553170	5	145,196,117,138,146,	0,1419,5451,77457,78145,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	108001010	108041194	chr10:108001010-108041194	0	-	108001010	108001010	8553170	3	328,138,146,	0,39350,40038,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	108038611	108041194	chr10:108038611-108041194	0	-	108038611	108038611	8553170	3	108,138,146,	0,1749,2437,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	108039844	108041194	chr10:108039844-108041194	0	-	108039844	108039844	8553170	2	654,146,	0,1204,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	108040380	108049346	chr10:108040380-108049346	0	-	108040380	108040380	8553170	7	118,146,147,115,98,179,75,	0,668,2797,6065,6306,7749,8891,
#Deleted in new
chr10	108296098	108296532	chr10:108296098-108296532	7	+	108296098	108296098	16724991	1	434,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	108547974	108561815	chr10:108547974-108561815	3	-	108547974	108547974	8553170	3	383,53,139,	0,1930,13702,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	108710517	108839363	chr10:108710517-108839363	3	+	108710517	108710517	8553170	3	18,51,411,	0,51051,128435,
#Partially deleted in new
chr10	108848185	108849561	chr10:108848185-108849561	7	+	108848185	108848185	16724991	1	1376,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	108940968	108941310	chr10:108940968-108941310	3	-	108940968	108940968	8553170	1	342,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	109239638	109239746	chr10:109239638-109239746	3	+	109239638	109239638	8553170	1	108,	0,
#Deleted in new
chr10	109528118	109529008	chr10:109528118-109529008	7	+	109528118	109528118	16724991	1	890,	0,
#Deleted in new
chr10	109534654	109534990	chr10:109534654-109534990	7	+	109534654	109534654	16724991	1	336,	0,
#Partially deleted in new
chr10	109661813	109662050	chr10:109661813-109662050	7	+	109661813	109661813	16724991	1	237,	0,
#Deleted in new
chr10	109680441	109681041	chr10:109680441-109681041	7	+	109680441	109680441	16724991	1	600,	0,
#Deleted in new
chr10	109807650	109808129	chr10:109807650-109808129	7	+	109807650	109807650	16724991	1	479,	0,
#Partially deleted in new
chr10	109864765	109923553	chr10:109864765-109923553	1	-	109865183	109923433	789624	20	547,99,77,174,70,61,78,59,51,90,211,82,96,144,93,105,64,125,89,152,	0,3848,5187,5965,7026,8601,13024,13234,15422,16076,17666,19301,21480,23283,23737,26956,28246,42925,50245,58636,
#Partially deleted in new
chr10	109864765	109923511	chr10:109864765-109923511	1	-	109865183	109891794	789624	19	547,99,77,174,70,61,72,78,59,51,90,211,82,96,144,93,105,125,110,	0,3848,5187,5965,7026,8601,10762,13024,13234,15422,16076,17666,19301,21480,23283,23737,26956,42925,58636,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr10	109864765	109915075	chr10:109864765-109915075	0	-	109864765	109864765	8553170	17	547,99,77,174,70,61,2340,59,51,90,211,82,96,144,93,125,65,	0,3848,5187,5965,7026,8601,10762,13234,15422,16076,17666,19301,21480,23283,23737,42925,50245,
#Partially deleted in new
chr10	109864765	109923553	chr10:109864765-109923553	3	-	109865183	109923433	789624	21	547,99,77,174,70,61,72,78,59,51,90,211,82,96,144,93,105,64,125,89,152,	0,3848,5187,5965,7026,8601,10762,13024,13234,15422,16076,17666,19301,21480,23283,23737,26956,28246,42925,50245,58636,
#Partially deleted in new
chr10	109865053	109875668	chr10:109865053-109875668	0	-	109865053	109865053	8553170	7	259,99,77,174,70,61,141,	0,3560,4899,5677,6738,8313,10474,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	109868635	109871032	chr10:109868635-109871032	0	-	109868635	109868635	8553170	3	77,77,302,	0,1317,2095,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	109869857	109869992	chr10:109869857-109869992	3	+	109869857	109869857	8553170	1	135,	0,
#Partially deleted in new
chr10	109871788	109882609	chr10:109871788-109882609	0	-	109871788	109871788	8553170	7	73,61,72,78,59,90,178,	0,1578,3739,6001,6211,9053,10643,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	109871795	109880893	chr10:109871795-109880893	0	-	109871795	109871795	8553170	7	66,211,72,78,59,51,52,	0,1571,3732,5994,6204,8392,9046,
#Partially deleted in new
chr10	109875523	109884259	chr10:109875523-109884259	0	-	109875523	109875523	8553170	7	76,78,59,51,90,211,193,	0,2266,2476,4664,5318,6908,8543,
#Partially deleted in new
chr10	109877553	109884272	chr10:109877553-109884272	0	-	109877553	109877553	8553170	6	314,59,51,90,211,206,	0,446,2634,3288,4878,6513,
#Deleted in new
chr10	109877676	109878369	chr10:109877676-109878369	0	-	109877676	109877676	8553170	2	191,370,	0,323,
#Partially deleted in new
chr10	109877722	109882552	chr10:109877722-109882552	0	-	109877722	109877722	8553170	5	145,59,51,90,121,	0,277,2465,3119,4709,
#Partially deleted in new
chr10	109880841	109884049	chr10:109880841-109884049	0	-	109880841	109880841	8553170	3	90,211,262,	0,1590,2946,
#Partially deleted in new
chr10	109880872	109884539	chr10:109880872-109884539	0	-	109880872	109880872	8553170	4	59,211,82,47,	0,1559,3194,3620,
#Partially deleted in new
chr10	109880877	109915103	chr10:109880877-109915103	0	-	109880877	109880877	8553170	4	54,211,58,81,	0,1554,3189,34145,
#Partially deleted in new
chr10	109882431	109923467	chr10:109882431-109923467	0	-	109882431	109882431	8553170	7	211,82,96,144,93,125,66,	0,1635,3814,5617,6071,25259,40970,
#Partially deleted in new
chr10	109882434	109923490	chr10:109882434-109923490	0	-	109882434	109907807	789624	9	208,82,96,144,93,105,64,125,89,	0,1632,3811,5614,6068,9287,10577,25256,40967,
#Partially deleted in new
chr10	109882523	109923470	chr10:109882523-109923470	0	-	109882523	109882523	8553170	9	119,82,96,144,93,105,125,89,69,	0,1543,3722,5525,5979,9198,25167,32487,40878,
#Partially deleted in new
chr10	109882547	109907819	chr10:109882547-109907819	0	-	109882547	109907807	789624	7	95,82,144,93,105,64,129,	0,1519,5501,5955,9174,10464,25143,
#Partially deleted in new
chr10	109882592	109923448	chr10:109882592-109923448	0	-	109882592	109882592	8553170	9	50,82,96,144,93,105,64,89,47,	0,1474,3653,5456,5910,9129,10419,32418,40809,
#Partially deleted in new
chr10	109882600	109891354	chr10:109882600-109891354	0	-	109882600	109882600	8553170	6	42,82,96,144,93,89,	0,1466,3645,5448,5902,8665,
#Partially deleted in new
chr10	109884065	109923436	chr10:109884065-109923436	0	-	109884065	109884065	8553170	9	83,96,144,93,105,64,125,77,35,	0,2180,3983,4437,7656,8946,23625,30957,39336,
#Partially deleted in new
chr10	109884105	109892584	chr10:109884105-109892584	0	-	109884105	109884105	8553170	6	43,96,144,93,105,96,	0,2140,3943,4397,7616,8383,
#Partially deleted in new
chr10	109886265	109923431	chr10:109886265-109923431	0	-	109886265	109886265	8553170	9	76,144,93,105,64,95,125,89,30,	0,1783,2237,5456,6746,7750,21425,28745,37136,
#Partially deleted in new
chr10	109886269	109923440	chr10:109886269-109923440	0	-	109886269	109886269	8553170	7	72,93,105,64,125,89,39,	0,2233,5452,6742,21421,28741,37132,
#Partially deleted in new
chr10	109888097	109893493	chr10:109888097-109893493	0	-	109888097	109888097	8553170	5	95,93,105,64,124,	0,405,3624,4914,5272,
#Partially deleted in new
chr10	109888495	109915179	chr10:109888495-109915179	0	-	109888495	109888495	8553170	5	100,105,64,125,169,	0,3226,4516,19195,26515,
#Partially deleted in new
chr10	109891578	109907818	chr10:109891578-109907818	0	-	109891578	109891578	8553170	3	248,64,128,	0,1433,16112,
#Partially deleted in new
chr10	109891719	109893378	chr10:109891719-109893378	0	-	109891719	109891719	8553170	2	107,367,	0,1292,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	109940103	109953891	chr10:109940103-109953891	1	-	109940103	109940103	8553170	3	1566,180,136,	0,2577,13652,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	109946118	109957911	chr10:109946118-109957911	0	-	109946118	109946118	8553170	3	177,81,6068,	0,1077,5725,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	109946169	110008184	chr10:109946169-110008184	3	-	109946169	109946169	8553170	5	126,81,136,125,4,	0,1026,7586,59787,62011,
#Partially deleted in new
chr10	109996367	110118608	chr10:109996367-110118608	0	+	109996367	109996367	8553170	6	79,224,139,152,81,22,	0,104257,116409,119891,120974,122219,
#Partially deleted in new
chr10	109997513	110008381	chr10:109997513-110008381	1	-	109997513	109997513	8553170	3	62,125,201,	0,8443,10667,
#Partially deleted in new
chr10	110005803	110134330	chr10:110005803-110134330	1	+	110100653	110133618	789624	14	348,224,139,152,81,150,144,99,183,258,120,87,124,1005,	0,94821,106973,110455,111538,112783,113407,113662,116306,118213,120022,120613,124559,127522,
#Partially deleted in new
chr10	110007961	110134211	chr10:110007961-110134211	3	+	110100653	110133618	789624	15	338,224,139,152,81,150,144,99,183,258,120,87,124,96,886,	0,92663,104815,108297,109380,110625,111249,111504,114148,116055,117864,118455,122401,124343,125364,
#Partially deleted in new
chr10	110007963	110135565	chr10:110007963-110135565	1	+	110100653	110133618	789624	14	336,224,139,152,81,150,144,99,183,258,120,87,124,2240,	0,92661,104813,108295,109378,110623,111247,111502,114146,116053,117862,118453,122399,125362,
#Partially deleted in new
chr10	110008207	110117359	chr10:110008207-110117359	0	+	110008207	110008207	8553170	4	92,139,152,18,	0,104569,108051,109134,
#Partially deleted in new
chr10	110008208	110100704	chr10:110008208-110100704	0	+	110008208	110008208	8553170	3	91,58,80,	0,71031,92416,
#Partially deleted in new
chr10	110008230	110112894	chr10:110008230-110112894	0	+	110008230	110008230	8553170	5	69,92,224,54,118,	0,67387,92394,97769,104546,
#Partially deleted in new
chr10	110008230	110118630	chr10:110008230-110118630	0	+	110008230	110008230	8553170	7	69,224,54,139,152,81,44,	0,92394,97769,104546,108028,109111,110356,
#Partially deleted in new
chr10	110008251	110117379	chr10:110008251-110117379	0	+	110008251	110008251	8553170	4	48,224,139,38,	0,92373,104525,109090,
#Partially deleted in new
chr10	110016434	110117402	chr10:110016434-110117402	0	+	110016434	110016434	8553170	5	186,224,139,152,61,	0,84190,96342,99824,100907,
#Partially deleted in new
chr10	110077004	110117395	chr10:110077004-110117395	0	+	110077004	110077004	8553170	5	114,224,139,152,54,	0,23620,35772,39254,40337,
#Partially deleted in new
chr10	110077004	110112906	chr10:110077004-110112906	0	+	110077004	110077004	8553170	4	114,58,224,130,	0,2235,23620,35772,
#Partially deleted in new
chr10	110079238	110124143	chr10:110079238-110124143	0	+	110079238	110079238	8553170	4	59,51,80,127,	0,21386,42974,44778,
#Deleted in new
chr10	110119314	110119690	chr10:110119314-110119690	0	+	110119314	110119314	8553170	2	40,225,	0,151,
#Partially deleted in new
chr10	110121854	110124168	chr10:110121854-110124168	0	+	110121854	110121854	8553170	2	438,152,	0,2162,
#Partially deleted in new
chr10	110123836	110130389	chr10:110123836-110130389	0	+	110123836	110123836	8553170	4	438,120,87,27,	0,1989,2580,6526,
#Partially deleted in new
chr10	110124239	110130393	chr10:110124239-110130393	0	+	110124239	110124239	8553170	4	35,99,87,31,	0,1586,2177,6123,
#Partially deleted in new
chr10	110125754	110133348	chr10:110125754-110133348	0	+	110125754	110125754	8553170	4	191,87,124,23,	0,662,4608,7571,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	110125901	110132727	chr10:110125901-110132727	0	+	110125901	110125901	8553170	4	44,87,124,423,	0,515,4461,6403,
#Deleted in new
chr10	110139213	110139426	chr10:110139213-110139426	7	-	110139213	110139213	16724991	1	213,	0,
#Partially deleted in new
chr10	110207604	110287365	chr10:110207604-110287365	1	+	110207808	110284987	789624	6	478,133,30,115,172,2542,	0,20584,37223,71575,72309,77219,
#Partially deleted in new
chr10	110207683	110280069	chr10:110207683-110280069	0	+	110207808	110280069	789624	4	399,133,115,156,	0,20505,71496,72230,
#Deleted in new
chr10	110207849	110208591	chr10:110207849-110208591	3	-	110207849	110207849	8553170	3	205,245,20,	0,391,722,
#Partially deleted in new
chr10	110210230	110286506	chr10:110210230-110286506	1	+	110228223	110284987	789624	5	85,133,115,172,1683,	0,17958,68949,69683,74593,
#Partially deleted in new
chr10	110225992	110286506	chr10:110225992-110286506	3	+	110226210	110284987	789624	6	291,133,30,115,172,1683,	0,2196,18835,53187,53921,58831,
#Partially deleted in new
chr10	110226034	110284890	chr10:110226034-110284890	0	+	110226034	110226034	8553170	6	249,133,46,115,172,67,	0,2154,18793,53145,53879,58789,
#Partially deleted in new
chr10	110226083	110285092	chr10:110226083-110285092	1	+	110226210	110284987	789624	5	200,133,115,172,269,	0,2105,53096,53830,58740,
#Partially deleted in new
chr10	110227365	110285114	chr10:110227365-110285114	0	+	110227365	110227365	8553170	7	21,133,30,76,115,172,291,	0,823,17462,18377,51814,52548,57458,
#Partially deleted in new
chr10	110227540	110280024	chr10:110227540-110280024	0	+	110228223	110280024	789624	5	245,133,30,115,111,	0,648,17287,51639,52373,
#Partially deleted in new
chr10	110227642	110286506	chr10:110227642-110286506	0	+	110227642	110227642	8553170	6	679,30,76,115,172,1683,	0,17185,18100,51537,52271,57181,
#Partially deleted in new
chr10	110227678	110285048	chr10:110227678-110285048	1	+	110228223	110284987	789624	6	204,133,30,115,172,225,	0,510,17149,51501,52235,57145,
#Partially deleted in new
chr10	110257063	110257843	chr10:110257063-110257843	7	+	110257063	110257063	16724991	2	237,231,	0,549,
#Partially deleted in new
chr10	110290729	110304951	chr10:110290729-110304951	3	-	110294149	110303587	0	6	3558,154,162,143,120,204,	0,4498,6837,7918,12738,14018,
#Partially deleted in new
chr10	110294061	110304697	chr10:110294061-110304697	1	-	110294149	110303587	0	6	226,154,162,143,120,305,	0,1166,3505,4586,9406,10331,
#Partially deleted in new
chr10	110295229	110304906	chr10:110295229-110304906	0	-	110295229	110295229	8553170	5	152,179,143,120,159,	0,2337,3418,8238,9518,
#Partially deleted in new
chr10	110297569	110304938	chr10:110297569-110304938	0	-	110297569	110297569	8553170	5	159,163,190,120,191,	0,1078,2977,5898,7178,
#Partially deleted in new
chr10	110298676	110304131	chr10:110298676-110304131	0	-	110298676	110298676	8553170	2	114,664,	0,4791,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	110428839	110496187	chr10:110428839-110496187	3	-	110428839	110428839	8553170	4	171,84,164,69,	0,6284,13371,67279,
#Partially deleted in new
chr10	110450628	110451240	chr10:110450628-110451240	7	+	110450628	110450628	16724991	1	612,	0,
#Partially deleted in new
chr10	110475103	110496204	chr10:110475103-110496204	1	-	110475103	110475103	8553170	2	123,86,	0,21015,
#Partially deleted in new
chr10	110497837	110511544	chr10:110497837-110511544	3	+	110498121	110510426	0	4	663,149,220,1525,	0,4883,9097,12182,
#Partially deleted in new
chr10	110502746	110510437	chr10:110502746-110510437	0	+	110502746	110502746	8553170	4	123,58,220,418,	0,686,4188,7273,
#Partially deleted in new
chr10	110550114	110550854	chr10:110550114-110550854	7	-	110550114	110550114	16724991	1	740,	0,
#Partially deleted in new
chr10	110567690	110604636	chr10:110567690-110604636	3	+	110567816	110604302	789624	29	141,76,39,68,72,80,79,118,176,81,165,122,214,104,100,161,142,151,153,152,159,108,109,248,213,192,178,107,406,	0,1247,6016,7645,9730,10144,10937,13213,14232,14871,15693,16150,16492,21914,22201,22721,23300,25382,28707,30448,31963,32748,33331,33946,34275,34783,35134,35493,36540,
#Partially deleted in new
chr10	110568326	110582006	chr10:110568326-110582006	0	+	110568326	110568326	8553170	9	161,76,39,68,72,80,79,118,84,	0,611,5380,7009,9094,9508,10301,12577,13596,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	110642677	110642785	chr10:110642677-110642785	3	-	110642677	110642677	8553170	1	108,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	110644396	110839469	chr10:110644396-110839469	3	+	110644454	110835978	789624	14	249,1084,62,92,98,141,132,80,670,105,661,135,122,3602,	0,136404,138969,139944,140395,153111,155390,165986,167881,175675,176878,179083,186664,191471,
#Deleted in new
chr10	110756455	110756723	chr10:110756455-110756723	3	+	110756455	110756455	8553170	1	268,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	110761141	110761242	chr10:110761141-110761242	7	+	110761141	110761141	16724991	1	101,	0,
#Partially deleted in new
chr10	110823587	110831513	chr10:110823587-110831513	0	+	110823587	110823587	8553170	2	27,453,	0,7473,
#Partially deleted in new
chr10	110827770	110836234	chr10:110827770-110836234	0	+	110827770	110827770	8553170	3	84,122,367,	0,3290,8097,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	110835177	110836258	chr10:110835177-110836258	0	+	110835177	110835177	8553170	2	514,391,	0,690,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	110869742	110871594	chr10:110869742-110871594	3	+	110869742	110869742	8553170	2	99,302,	0,1550,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	110869867	110872233	chr10:110869867-110872233	3	-	110869867	110869867	8553170	2	571,207,	0,2159,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	110871794	110900005	chr10:110871794-110900005	1	+	110876743	110898088	0	13	224,105,84,303,95,114,222,98,115,108,111,140,1978,	0,4171,4875,9438,11208,13458,15870,17738,18761,22296,22617,24153,26233,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	110871806	110900006	chr10:110871806-110900006	3	+	110876027	110898088	0	12	212,105,303,95,114,222,98,115,108,111,140,1979,	0,4159,9426,11196,13446,15858,17726,18749,22284,22605,24141,26221,
#Partially deleted in new
chr10	110871892	110887761	chr10:110871892-110887761	0	+	110871892	110871892	8553170	5	126,303,95,114,97,	0,9340,11110,13360,15772,
#Partially deleted in new
chr10	110871918	110885339	chr10:110871918-110885339	0	+	110871918	110871918	8553170	6	100,105,84,303,95,87,	0,4047,4751,9314,11084,13334,
#Partially deleted in new
chr10	110871954	110887844	chr10:110871954-110887844	0	+	110876027	110887844	789624	6	64,105,261,95,114,180,	0,4011,9320,11048,13298,15710,
#Partially deleted in new
chr10	110880318	110887798	chr10:110880318-110887798	0	+	110880318	110880318	8553170	5	167,303,95,114,134,	0,914,2684,4934,7346,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	110884770	110894179	chr10:110884770-110894179	0	+	110884770	110884770	8553170	5	596,222,98,115,89,	0,2894,4762,5785,9320,
#Partially deleted in new
chr10	110885252	110898122	chr10:110885252-110898122	0	+	110885252	110885252	8553170	7	114,150,71,108,111,140,95,	0,2412,5347,8838,9159,10695,12775,
#Partially deleted in new
chr10	110887752	110890870	chr10:110887752-110890870	0	+	110887752	110887752	8553170	3	134,98,315,	0,1780,2803,
#Partially deleted in new
chr10	110887772	110896043	chr10:110887772-110896043	0	+	110887772	110887772	8553170	5	114,98,115,108,96,	0,1760,2783,6318,8175,
#Partially deleted in new
chr10	110890637	110898718	chr10:110890637-110898718	0	+	110890637	110890637	8553170	4	33,111,140,691,	0,3774,5310,7390,
#Deleted in new
chr10	110898089	110898155	chr10:110898089-110898155	3	+	110898089	110898089	5263520	1	66,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	110898729	110919274	chr10:110898729-110919274	1	-	110900359	110918157	789624	4	1797,75,93,154,	0,2808,19391,20391,
#Partially deleted in new
chr10	110899955	110919201	chr10:110899955-110919201	3	-	110900359	110901583	789624	3	571,75,81,	0,1582,19165,
#Partially deleted in new
chr10	110900120	110919201	chr10:110900120-110919201	1	-	110900483	110918157	789624	5	406,75,157,93,81,	0,1417,7559,18000,19000,
#Partially deleted in new
chr10	110900164	110919157	chr10:110900164-110919157	1	-	110900359	110918157	789624	3	362,93,37,	0,17956,18956,
#Partially deleted in new
chr10	110900217	110918936	chr10:110900217-110918936	1	-	110900359	110918157	789624	4	309,75,93,92,	0,1320,17903,18627,
#Partially deleted in new
chr10	110900228	110919157	chr10:110900228-110919157	1	-	110900359	110901583	789624	3	298,48,37,	0,1309,18892,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	110900233	110904945	chr10:110900233-110904945	0	-	110900233	110900233	8553170	1	4712,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	110906478	110919167	chr10:110906478-110919167	0	-	110906478	110906478	8553170	3	1358,93,47,	0,11642,12642,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	110907482	110908182	chr10:110907482-110908182	3	+	110907482	110907482	8553170	1	700,	0,
#Deleted in new
chr10	110910595	110912244	chr10:110910595-110912244	3	+	110910595	110910595	8553170	1	1649,	0,
#Deleted in new
chr10	110917958	110919161	chr10:110917958-110919161	0	-	110917958	110917958	8553170	2	255,41,	0,1162,
#Partially deleted in new
chr10	110919546	111013667	chr10:110919546-111013667	3	+	110964358	111011818	789624	9	111,937,138,131,189,123,138,118,2058,	0,44578,66081,80868,85059,87984,89701,90166,92063,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	110919592	110964524	chr10:110919592-110964524	0	+	110919592	110919592	8553170	3	65,185,400,	0,32015,44532,
#Partially deleted in new
chr10	110919602	111011670	chr10:110919602-111011670	0	+	110919602	110919602	8553170	7	55,131,189,123,138,118,61,	0,80812,85003,87928,89645,90110,92007,
#Partially deleted in new
chr10	110920002	110964729	chr10:110920002-110964729	0	+	110920002	110920002	8553170	2	144,605,	0,44122,
#Deleted in new
chr10	110936621	110937233	chr10:110936621-110937233	7	-	110936621	110936621	16724991	1	612,	0,
#Partially deleted in new
chr10	110964124	111013664	chr10:110964124-111013664	1	+	110964358	111011818	789624	7	937,131,189,123,138,118,2055,	0,36290,40481,43406,45123,45588,47485,
#Partially deleted in new
chr10	110964850	111013666	chr10:110964850-111013666	0	+	110964850	111011818	789624	7	211,131,189,123,138,118,2057,	0,35564,39755,42680,44397,44862,46759,
#Partially deleted in new
chr10	110965031	110985922	chr10:110965031-110985922	0	+	110965031	110965031	8553170	2	30,295,	0,20596,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	110988925	110989013	chr10:110988925-110989013	3	+	110988925	110988925	5263520	1	88,	0,
#Deleted in new
chr10	111077162	111080907	chr10:111077162-111080907	3	+	111077996	111079394	789624	1	3745,	0,
#Deleted in new
chr10	111104955	111105248	chr10:111104955-111105248	7	+	111104955	111104955	16724991	1	293,	0,
#Partially deleted in new
chr10	111322777	111323397	chr10:111322777-111323397	7	+	111322777	111322777	16724991	1	620,	0,
#Partially deleted in new
chr10	111349938	111352103	chr10:111349938-111352103	3	-	111349938	111349938	8553170	2	260,167,	0,1998,
#Deleted in new
chr10	111498190	111498941	chr10:111498190-111498941	7	-	111498190	111498190	16724991	1	751,	0,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr10	112149863	112183763	chr10:112149863-112183763	3	-	112153549	112181784	789624	22	3803,59,190,141,78,143,265,71,116,86,114,213,100,137,97,147,114,74,123,131,98,71,	0,4765,6000,7385,8452,10047,10740,11803,13837,14661,16538,18448,18989,22318,23106,23835,25736,28120,30609,31819,32930,33829,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr10	112153869	112183710	chr10:112153869-112183710	1	-	112157236	112181784	789624	19	3520,78,143,265,71,116,86,114,213,100,137,97,147,114,74,123,131,98,37,	0,4446,6041,6734,7797,9831,10655,12532,14442,14983,18312,19100,19829,21730,24114,26603,27813,28924,29804,
#Partially deleted in new
chr10	112180520	112215377	chr10:112180520-112215377	0	-	112180520	112180520	8553170	4	75,131,98,210,	0,1162,2273,34647,
#Partially deleted in new
chr10	112180551	112214396	chr10:112180551-112214396	0	-	112180551	112180551	8553170	4	44,131,98,78,	0,1131,2242,33767,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	112283399	112304684	chr10:112283399-112304684	1	+	112283734	112302316	789624	11	97,163,191,143,103,104,84,163,73,33,2427,	0,248,1135,2671,2889,10338,10578,14669,16092,18701,18858,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	112283399	112305035	chr10:112283399-112305035	3	+	112283734	112303312	789624	11	97,163,191,143,73,104,84,163,73,33,1773,	0,248,1135,2671,2919,10338,10578,14669,16092,18701,19863,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	112283430	112304972	chr10:112283430-112304972	1	+	112283734	112302316	789624	11	66,163,191,143,73,104,84,163,73,33,2715,	0,217,1104,2640,2888,10307,10547,14638,16061,18670,18827,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	112283655	112305027	chr10:112283655-112305027	1	+	112283734	112303312	789624	10	155,191,143,73,104,84,163,73,33,1765,	0,879,2415,2663,10082,10322,14413,15836,18445,19607,
#Deleted in new
chr10	112299611	112299690	chr10:112299611-112299690	3	+	112299611	112299611	5263520	1	79,	0,
#Deleted in new
chr10	112299611	112299688	chr10:112299611-112299688	3	-	112299611	112299611	5263520	1	77,	0,
#Partially deleted in new
chr10	112308180	112356574	chr10:112308180-112356574	7	-	112308180	112308180	16724991	21	101,92,99,174,193,141,178,156,166,71,105,84,138,149,121,126,145,186,110,333,354,	0,1028,2974,4136,6068,7120,9698,16197,19009,26857,27448,28265,30868,32576,33456,34935,37825,39982,43564,45661,48040,
#Partially deleted in new
chr10	112308218	112339099	chr10:112308218-112339099	4	-	112308218	112308218	16724991	11	63,92,99,174,193,141,178,156,169,84,51,	0,990,2936,4098,6030,7082,9660,16159,18968,28227,30830,
#Partially deleted in new
chr10	112339160	112346152	chr10:112339160-112346152	4	-	112339160	112339160	16724991	5	26,38,149,110,147,	0,838,1596,2476,6845,
#Partially deleted in new
chr10	112348159	112351795	chr10:112348159-112351795	4	-	112348159	112348159	16724991	2	189,51,	0,3585,
#Partially deleted in new
chr10	112374017	112428376	chr10:112374017-112428376	3	+	112394946	112427358	789624	21	252,185,109,65,102,100,179,33,52,74,78,135,135,96,73,89,117,144,102,72,1159,	0,20900,24883,30493,30687,34404,35489,36445,36566,37438,37884,39155,42870,43828,47575,47929,48307,51320,52240,52770,53200,
#Partially deleted in new
chr10	112375234	112408521	chr10:112375234-112408521	0	+	112375234	112375234	8553170	6	308,185,109,65,102,100,	0,19683,23666,29276,29470,33187,
#Partially deleted in new
chr10	112375264	112428379	chr10:112375264-112428379	1	+	112394946	112427358	789624	21	278,185,109,65,102,100,179,33,52,74,78,135,135,96,73,89,117,144,102,72,1162,	0,19653,23636,29246,29440,33157,34242,35198,35319,36191,36637,37908,41623,42581,46328,46682,47060,50073,50993,51523,51953,
#Partially deleted in new
chr10	112376197	112428379	chr10:112376197-112428379	1	+	112376309	112427358	789624	21	251,185,109,65,102,100,179,33,52,74,78,135,135,96,73,89,117,144,102,72,1162,	0,18720,22703,28313,28507,32224,33309,34265,34386,35258,35704,36975,40690,41648,45395,45749,46127,49140,50060,50590,51020,
#Partially deleted in new
chr10	112376197	112428379	chr10:112376197-112428379	1	+	112394946	112427358	789624	20	251,185,109,65,102,100,179,33,52,74,78,135,135,96,73,89,117,144,102,1162,	0,18720,22703,28313,28507,32224,33309,34265,34386,35258,35704,36975,40690,41648,45395,45749,46127,49140,50060,51020,
#Partially deleted in new
chr10	112376198	112428380	chr10:112376198-112428380	1	+	112394946	112427358	789624	21	250,185,109,65,102,100,179,33,52,74,78,135,135,96,73,89,117,144,102,72,1163,	0,18719,22702,28312,28506,32223,33308,34264,34385,35257,35703,36974,40689,41647,45394,45748,46126,49139,50059,50589,51019,
#Partially deleted in new
chr10	112395812	112409458	chr10:112395812-112409458	0	-	112395812	112395812	8553170	3	588,56,52,	0,13060,13594,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	112406170	112409490	chr10:112406170-112409490	0	-	112406170	112406170	8553170	4	178,89,56,477,	0,392,2702,2843,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	112406273	112409490	chr10:112406273-112409490	0	-	112406273	112406273	8553170	5	75,89,293,56,279,	0,289,2128,2599,2938,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	112406293	112409494	chr10:112406293-112409494	1	-	112406293	112406293	8553170	4	55,112,56,283,	0,269,2579,2918,
#Partially deleted in new
chr10	112409532	112421626	chr10:112409532-112421626	0	+	112409532	112409532	8553170	8	153,33,52,78,135,135,96,34,	0,930,1051,2369,3640,7355,8313,12060,
#Partially deleted in new
chr10	112411382	112417938	chr10:112411382-112417938	0	+	112411382	112411382	8553170	5	147,78,135,135,93,	0,519,1790,5505,6463,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	112419279	112419974	chr10:112419279-112419974	1	-	112419279	112419279	8553170	1	695,	0,
#Partially deleted in new
chr10	112421980	112426608	chr10:112421980-112426608	0	+	112421980	112421980	8553170	4	55,117,144,351,	0,344,3357,4277,
#Partially deleted in new
chr10	112424427	112446917	chr10:112424427-112446917	1	-	112428424	112445436	789624	12	1166,57,47,146,42,168,54,162,160,92,481,331,	0,3954,7812,7948,8812,9869,13908,16106,17764,19087,20742,22159,
#Partially deleted in new
chr10	112430299	112446914	chr10:112430299-112446914	3	-	112430803	112445436	789624	11	608,47,146,42,168,54,162,160,92,481,210,	0,1940,2076,2940,3997,8036,10234,11892,13215,14870,16405,
#Partially deleted in new
chr10	112430723	112446901	chr10:112430723-112446901	1	-	112430803	112445436	789624	11	184,47,146,42,168,54,162,160,80,481,197,	0,1516,1652,2516,3573,7612,9810,11468,12791,14446,15981,
#Partially deleted in new
chr10	112430808	112433485	chr10:112430808-112433485	0	-	112430808	112430808	8553170	4	99,47,146,246,	0,1431,1567,2431,
#Partially deleted in new
chr10	112430823	112433570	chr10:112430823-112433570	0	-	112430823	112430823	8553170	5	84,47,146,42,30,	0,1416,1552,2416,2717,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	112446997	112450726	chr10:112446997-112450726	0	+	112446997	112446997	789624	3	470,108,1845,	0,1384,1884,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	112446998	112449659	chr10:112446998-112449659	0	+	112446998	112446998	789624	2	469,778,	0,1883,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	112447233	112485291	chr10:112447233-112485291	0	+	112447233	112447233	8553170	4	234,59,111,323,	0,13290,17313,37735,
#Partially deleted in new
chr10	112447257	112818744	chr10:112447257-112818744	3	+	112447373	112815383	789624	8	210,59,111,78,85,71,62,3455,	0,13266,17289,79829,90988,220960,221679,368032,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	112447257	112737784	chr10:112447257-112737784	1	+	112447373	112736774	789624	8	210,59,111,78,85,71,62,1062,	0,13266,17289,79829,90988,220960,221679,289465,
#Partially deleted in new
chr10	112447263	112538646	chr10:112447263-112538646	0	+	112447263	112447263	8553170	5	204,59,111,78,401,	0,13260,17283,79823,90982,
#Partially deleted in new
chr10	112447275	112464758	chr10:112447275-112464758	0	+	112447275	112447275	8553170	3	192,59,212,	0,13248,17271,
#Partially deleted in new
chr10	112447348	112538301	chr10:112447348-112538301	0	+	112447348	112447348	8553170	6	119,59,111,78,21,56,	0,13175,17198,79738,86181,90897,
#Partially deleted in new
chr10	112447358	112527405	chr10:112447358-112527405	0	+	112447358	112447358	8553170	4	109,59,111,319,	0,13165,17188,79728,
#Deleted in new
chr10	112548631	112548872	chr10:112548631-112548872	7	-	112548631	112548631	16724991	1	241,	0,
#Deleted in new
chr10	112634169	112634254	chr10:112634169-112634254	3	+	112634169	112634169	5263520	1	85,	0,
#Partially deleted in new
chr10	112671811	112677819	chr10:112671811-112677819	3	-	112671811	112671811	8553170	3	133,40,185,	0,917,5823,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	112810030	112821838	chr10:112810030-112821838	3	-	112810030	112810030	8553170	3	912,209,118,	0,5185,11690,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	112823489	112827726	chr10:112823489-112827726	3	+	112823489	112823489	789624	1	4237,	0,
#Deleted in new
chr10	112831168	112832454	chr10:112831168-112832454	3	+	112831168	112831168	8553170	1	1286,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	112888734	112906111	chr10:112888734-112906111	3	+	112888734	112888734	8553170	3	73,107,135,	0,2231,17242,
#Partially deleted in new
chr10	112950249	113167678	chr10:112950249-113167678	1	+	112950756	113165972	0	15	696,67,125,69,102,133,103,87,126,160,108,49,51,73,2124,	0,957,1233,14306,89775,190934,193673,195761,200748,201475,202083,207771,208417,209670,215305,
#Partially deleted in new
chr10	112950249	113167678	chr10:112950249-113167678	1	+	112950756	113165634	789624	11	696,67,125,133,103,87,126,160,108,49,2124,	0,957,1233,190934,193673,195761,200748,201475,202083,207771,215305,
#Partially deleted in new
chr10	112950249	113167678	chr10:112950249-113167678	1	+	112950756	113165972	789624	13	696,67,125,102,133,103,87,126,160,108,49,73,2124,	0,957,1233,89775,190934,193673,195761,200748,201475,202083,207771,209670,215305,
#Partially deleted in new
chr10	112950249	113167678	chr10:112950249-113167678	1	+	112950756	113165634	0	14	696,67,125,69,102,133,103,87,126,160,108,49,51,2124,	0,957,1233,14306,89775,190934,193673,195761,200748,201475,202083,207771,208417,215305,
#Partially deleted in new
chr10	112950249	113167678	chr10:112950249-113167678	1	+	112951544	113165972	789624	15	696,67,125,102,144,133,91,87,126,160,108,49,51,73,2124,	0,957,1233,89775,139147,190934,193673,195761,200748,201475,202083,207771,208417,210369,215305,
#Partially deleted in new
chr10	112950249	113167678	chr10:112950249-113167678	1	+	112950756	113165972	789624	14	696,67,125,69,102,133,103,87,141,160,108,49,73,2124,	0,957,1233,14306,89775,190934,193673,195761,200733,201475,202083,207771,210369,215305,
#Partially deleted in new
chr10	112950406	113167493	chr10:112950406-113167493	1	+	112950756	113165972	0	14	539,67,125,69,102,133,103,87,126,160,108,49,73,1939,	0,800,1076,14149,89618,190777,193516,195604,200591,201318,201926,207614,210212,215148,
#Partially deleted in new
chr10	112950451	113167678	chr10:112950451-113167678	3	+	112950756	113165972	0	14	494,67,125,102,133,103,87,126,160,108,49,51,73,2124,	0,755,1031,89573,190732,193471,195559,200546,201273,201881,207569,208215,209468,215103,
#Partially deleted in new
chr10	112950585	113165972	chr10:112950585-113165972	1	+	112950756	113165634	0	13	360,67,125,102,141,133,103,87,126,160,108,49,418,	0,621,897,89439,138814,190598,193337,195425,200412,201139,201747,207435,214969,
#Deleted in new
chr10	112950645	112951875	chr10:112950645-112951875	3	-	112950645	112950645	8553170	2	362,98,	0,1132,
#Partially deleted in new
chr10	112950659	113165612	chr10:112950659-113165612	1	+	112950756	113161585	0	15	286,67,125,102,133,103,87,126,160,108,49,51,73,25,58,	0,547,823,89365,190524,193263,195351,200338,201065,201673,207361,208007,209260,210919,214895,
#Partially deleted in new
chr10	112950659	113165612	chr10:112950659-113165612	1	+	112950756	113161585	789624	15	286,67,125,102,133,91,87,126,160,108,49,51,73,25,58,	0,547,823,89365,190524,193263,195351,200338,201065,201673,207361,208007,209260,210919,214895,
#Partially deleted in new
chr10	112950663	113166160	chr10:112950663-113166160	1	+	112950756	113160661	789624	15	282,67,125,102,133,103,87,141,160,108,49,51,73,73,606,	0,543,819,89361,190520,193259,195347,200319,201061,201669,207357,208003,209256,209955,214891,
#Partially deleted in new
chr10	112950756	113165972	chr10:112950756-113165972	1	+	112950756	113165972	789624	13	189,67,125,102,133,103,87,141,160,108,49,73,418,	0,450,726,89268,190427,193166,195254,200226,200968,201576,207264,209862,214798,
#Partially deleted in new
chr10	112950915	113141316	chr10:112950915-113141316	0	+	112950915	113141316	789624	7	30,67,125,69,102,141,133,	0,291,567,13640,89109,138484,190268,
#Deleted in new
chr10	112987475	112987865	chr10:112987475-112987865	7	+	112987475	112987475	16724991	1	390,	0,
#Partially deleted in new
chr10	113125535	113146096	chr10:113125535-113146096	0	+	113125935	113146096	789624	4	403,133,103,86,	0,15648,18387,20475,
#Partially deleted in new
chr10	113126021	113151023	chr10:113126021-113151023	0	+	113126021	113126021	8553170	5	81,133,103,87,26,	0,15162,17901,19989,24976,
#Partially deleted in new
chr10	113126689	113151774	chr10:113126689-113151774	0	+	113126878	113151774	789624	6	192,133,103,87,126,50,	0,14494,17233,19321,24308,25035,
#Partially deleted in new
chr10	113126956	113151766	chr10:113126956-113151766	0	+	113126956	113126956	8553170	6	97,133,91,87,126,42,	0,14227,16966,19054,24041,24768,
#Partially deleted in new
chr10	113129205	113151057	chr10:113129205-113151057	0	+	113129205	113129205	8553170	5	167,133,103,87,60,	0,11978,14717,16805,21792,
#Partially deleted in new
chr10	113129356	113146088	chr10:113129356-113146088	0	+	113129864	113146088	789624	4	631,133,91,78,	0,11827,14566,16654,
#Partially deleted in new
chr10	113129645	113151087	chr10:113129645-113151087	0	+	113129645	113129645	8553170	5	169,133,103,87,90,	0,11538,14277,16365,21352,
#Partially deleted in new
chr10	113132021	113151758	chr10:113132021-113151758	0	+	113132021	113132021	8553170	6	80,133,103,87,126,34,	0,9162,11901,13989,18976,19703,
#Partially deleted in new
chr10	113132895	113146094	chr10:113132895-113146094	0	+	113132895	113132895	8553170	5	125,50,133,103,84,	0,344,8288,11027,13115,
#Partially deleted in new
chr10	113146071	113165632	chr10:113146071-113165632	0	+	113146071	113165632	789624	7	26,126,160,108,49,73,78,	0,4926,5653,6261,11949,13848,19483,
#Partially deleted in new
chr10	113151082	113166324	chr10:113151082-113166324	0	+	113151082	113160661	789624	7	41,160,108,49,73,73,770,	0,642,1250,6938,8837,9536,14472,
#Partially deleted in new
chr10	113151770	113166309	chr10:113151770-113166309	0	+	113151770	113165634	789624	4	114,108,49,755,	0,562,6250,13784,
#Partially deleted in new
chr10	113151830	113165940	chr10:113151830-113165940	0	+	113151830	113160661	789624	7	54,108,49,73,73,25,386,	0,502,6190,8089,8788,9748,13724,
#Partially deleted in new
chr10	113152413	113165961	chr10:113152413-113165961	0	+	113152413	113165961	789624	3	27,49,106,	0,5607,13442,
#Deleted in new
chr10	113157772	113165587	chr10:113157772-113165587	0	+	113157772	113157772	8553170	2	297,33,	0,7782,
#Deleted in new
chr10	113161230	113165681	chr10:113161230-113165681	0	+	113161230	113161230	8553170	2	373,127,	0,4324,
#Partially deleted in new
chr10	113353424	113353484	chr10:113353424-113353484	3	+	113353424	113353424	8553170	1	60,	0,
#Deleted in new
chr10	113482615	113483113	chr10:113482615-113483113	7	+	113482615	113482615	16724991	1	498,	0,
#Partially deleted in new
chr10	113550836	113589602	chr10:113550836-113589602	1	+	113567497	113588369	789624	13	125,37,117,108,117,120,172,98,256,143,135,146,1398,	0,16652,23452,25060,26313,27189,27790,29758,31039,32379,33311,34956,37368,
#Partially deleted in new
chr10	113553025	113589599	chr10:113553025-113589599	3	+	113553121	113588369	789624	13	165,37,117,108,117,120,172,98,256,143,135,146,1395,	0,14463,21263,22871,24124,25000,25601,27569,28850,30190,31122,32767,35179,
#Partially deleted in new
chr10	113567483	113570158	chr10:113567483-113570158	0	+	113567483	113567483	8553170	2	42,515,	0,2160,
#Partially deleted in new
chr10	113588715	113664046	chr10:113588715-113664046	3	-	113588974	113663882	789624	41	364,132,312,108,105,99,105,312,108,105,99,105,198,114,108,105,99,105,312,108,105,99,105,198,122,112,105,99,105,108,117,105,105,108,105,105,105,105,88,95,236,	0,950,1862,3478,6907,8370,9253,15893,17046,17462,19698,21743,23518,25467,26123,26996,28739,31888,33153,34813,36110,37331,40201,40872,42793,43137,44368,45396,51511,52649,57109,58207,61321,61722,63087,64219,65305,68754,73963,74636,75095,
#Partially deleted in new
chr10	113588824	113664070	chr10:113588824-113664070	1	-	113588974	113663882	789624	41	255,132,312,108,105,99,105,312,108,105,99,105,198,114,108,105,99,105,312,108,105,99,105,198,102,108,105,99,105,108,117,105,105,108,105,105,105,105,88,95,260,	0,841,1753,3369,6798,8261,9144,15784,16937,17353,19589,21634,23409,25358,26014,26887,28630,31779,33044,34704,36001,37222,40092,40763,42684,43032,44259,45287,51402,52540,57000,58098,61212,61613,62978,64110,65196,68645,73854,74527,74986,
#Partially deleted in new
chr10	113588824	113664070	chr10:113588824-113664070	1	-	113588974	113663882	789624	42	258,132,312,108,105,99,105,312,108,105,99,105,198,114,108,105,99,105,312,108,105,99,105,198,102,108,105,99,105,108,105,117,105,105,108,105,105,105,105,88,95,260,	0,841,1753,3369,6798,8261,9144,15784,16937,17353,19589,21634,23409,25358,26014,26887,28630,31779,33044,34704,36001,37222,40092,40763,42684,43032,44259,45287,51402,52540,54109,57000,58098,61212,61613,62978,64110,65196,68645,73854,74527,74986,
#Partially deleted in new
chr10	113588832	113664127	chr10:113588832-113664127	1	-	113588974	113663882	789624	42	247,132,312,108,105,99,105,312,108,105,99,105,198,114,108,105,99,105,312,108,105,99,105,198,102,108,105,99,105,108,105,117,105,105,108,105,105,105,105,88,95,317,	0,833,1745,3361,6790,8253,9136,15776,16929,17345,19581,21626,23401,25350,26006,26879,28622,31771,33036,34696,35993,37214,40084,40755,42676,43024,44251,45279,51394,52532,54101,56992,58090,61204,61605,62970,64102,65188,68637,73846,74519,74978,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	113679161	113730907	chr10:113679161-113730907	3	+	113697493	113729540	0	7	188,110,137,129,176,130,1597,	0,18332,41870,42489,46200,47143,50149,
#Partially deleted in new
chr10	113679182	113726419	chr10:113679182-113726419	0	+	113697493	113726419	789624	6	167,110,137,129,176,115,	0,18311,41849,42468,46179,47122,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	113679203	113730896	chr10:113679203-113730896	1	+	113697493	113729424	0	8	146,110,137,129,68,74,130,1586,	0,18290,41828,42447,46158,46613,47101,50107,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	113679668	113730903	chr10:113679668-113730903	1	+	113697493	113729540	0	8	310,74,110,137,129,176,130,1593,	0,12328,17825,41363,41982,45693,46636,49642,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	113679668	113730907	chr10:113679668-113730907	1	+	113679754	113729540	789624	7	310,110,168,129,176,130,1597,	0,17825,41332,41982,45693,46636,49642,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	113679668	113730907	chr10:113679668-113730907	1	+	113697493	113729424	0	8	310,110,137,129,68,74,130,1597,	0,17825,41363,41982,45693,46148,46636,49642,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	113679876	113730903	chr10:113679876-113730903	1	+	113697493	113729540	0	7	102,110,137,129,176,130,1593,	0,17617,41155,41774,45485,46428,49434,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	113679939	113730903	chr10:113679939-113730903	1	+	113697493	113729540	0	8	39,107,110,137,129,176,130,1593,	0,12024,17554,41092,41711,45422,46365,49371,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	113691971	113730907	chr10:113691971-113730907	1	+	113691971	113729540	0	7	99,110,137,129,176,130,1597,	0,5522,29060,29679,33390,34333,37339,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	113709344	113730907	chr10:113709344-113730907	1	+	113709411	113729540	0	6	102,137,129,176,130,1597,	0,11687,12306,16017,16960,19966,
#Partially deleted in new
chr10	113710680	113719332	chr10:113710680-113719332	3	-	113710680	113710680	8553170	3	329,243,120,	0,909,8532,
#Partially deleted in new
chr10	113719209	113721686	chr10:113719209-113721686	0	+	113719209	113719209	8553170	3	434,137,36,	0,1822,2441,
#Partially deleted in new
chr10	113720997	113729503	chr10:113720997-113729503	0	+	113720997	113720997	8553170	5	171,129,176,130,193,	0,653,4364,5307,8313,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	113751453	113782432	chr10:113751453-113782432	3	+	113755277	113780602	789624	12	308,47,89,107,135,76,117,120,107,210,102,1831,	0,3805,14957,15158,15891,17361,18330,20516,22773,23372,24311,29148,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	113751453	113782432	chr10:113751453-113782432	1	+	113767384	113780781	789624	13	308,147,89,107,135,76,117,120,107,168,102,136,1831,	0,3805,14957,15158,15891,17361,18330,20516,22773,23372,24311,25670,29148,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	113751453	113782432	chr10:113751453-113782432	1	+	113767384	113780781	789624	11	308,147,135,76,117,120,107,168,102,136,1831,	0,3805,15891,17361,18330,20516,22773,23372,24311,25670,29148,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	113764818	113777726	chr10:113764818-113777726	1	+	113765380	113777640	789624	12	572,89,107,135,76,117,120,107,168,102,136,317,	0,1592,1793,2526,3996,4965,7151,9408,10007,10946,12305,12591,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	113771252	113782433	chr10:113771252-113782433	1	+	113771975	113780781	789624	7	27,120,107,210,102,136,1832,	0,717,2974,3573,4512,5871,9349,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	113772027	113783429	chr10:113772027-113783429	1	+	113774322	113780781	789624	6	62,107,168,102,136,2828,	0,2199,2798,3737,5096,8574,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	113774915	113777730	chr10:113774915-113777730	0	+	113774915	113777640	789624	4	120,102,136,321,	0,849,2208,2494,
#Deleted in new
chr10	113777992	113778054	chr10:113777992-113778054	3	-	113777992	113777992	5263520	1	62,	0,
#Deleted in new
chr10	113820458	113820590	chr10:113820458-113820590	3	+	113820458	113820458	8553170	1	132,	0,
#Partially deleted in new
chr10	113834724	113854100	chr10:113834724-113854100	1	-	113835151	113853182	0	9	588,142,155,146,141,119,134,1665,1378,	0,2337,6681,7618,9379,10960,12477,14255,17998,
#Partially deleted in new
chr10	113834728	113854383	chr10:113834728-113854383	3	-	113835151	113853182	0	10	584,142,155,146,141,119,134,1665,1125,30,	0,2333,6677,7614,9375,10956,12473,14251,17994,19625,
#Deleted in new
chr10	113853242	113854340	chr10:113853242-113854340	0	-	113853242	113853242	8553170	2	605,102,	0,996,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	113854660	113917194	chr10:113854660-113917194	3	+	113854872	113908536	789624	11	390,153,456,122,130,100,232,123,210,220,8915,	0,3867,21860,24913,29590,43449,47005,47810,48866,50156,53619,
#Partially deleted in new
chr10	113854823	113858852	chr10:113854823-113858852	0	+	113854823	113854823	8553170	2	227,325,	0,3704,
#Deleted in new
chr10	114044055	114046908	chr10:114044055-114046908	3	+	114044132	114045566	789624	1	2853,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	114109855	114118700	chr10:114109855-114118700	3	-	114109855	114109855	8553170	2	1631,305,	0,8540,
#Partially deleted in new
chr10	114111413	114111517	chr10:114111413-114111517	3	+	114111413	114111413	8553170	1	104,	0,
#Deleted in new
chr10	114117146	114117551	chr10:114117146-114117551	7	+	114117146	114117146	16724991	1	405,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr10	114120861	114174220	chr10:114120861-114174220	3	-	114125142	114163268	789624	16	4365,220,211,81,190,256,143,87,99,105,120,213,129,127,693,206,	0,5024,6599,9029,10285,11067,14051,15029,15286,16324,23635,24687,30230,36692,41775,53153,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr10	114120900	114174232	chr10:114120900-114174232	1	-	114125142	114163268	789624	17	4326,220,211,81,190,256,143,87,99,105,120,213,129,127,693,125,218,	0,4985,6560,8990,10246,11028,14012,14990,15247,16285,23596,24648,30191,36653,41736,52240,53114,
#Partially deleted in new
chr10	114124928	114144602	chr10:114124928-114144602	0	-	114125195	114144602	789624	10	298,211,81,190,256,143,87,99,105,106,	0,2532,4962,6218,7000,9984,10962,11219,12257,19568,
#Deleted in new
chr10	114130198	114131336	chr10:114130198-114131336	0	-	114130198	114130198	8553170	2	471,190,	0,948,
#Deleted in new
chr10	114131025	114132094	chr10:114131025-114132094	0	-	114131025	114131025	8553170	2	311,166,	0,903,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	114161607	114174202	chr10:114161607-114174202	1	-	114162632	114163268	789624	3	1722,125,188,	0,11533,12407,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	114161607	114174220	chr10:114161607-114174220	1	-	114162632	114163268	789624	2	1722,206,	0,12407,
#Deleted in new
chr10	114168155	114168280	chr10:114168155-114168280	3	-	114168155	114168155	8553170	1	125,	0,
#Deleted in new
chr10	114174104	114174179	chr10:114174104-114174179	3	-	114174104	114174104	5263520	1	75,	0,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr10	114179269	114232304	chr10:114179269-114232304	3	+	114187831	114231517	789624	26	147,331,59,145,106,61,105,180,144,172,87,168,108,171,243,138,111,171,276,120,117,168,228,47,88,819,	0,8556,11691,19903,22140,22968,23802,24118,24803,25452,26974,31311,31590,32596,34076,34707,38275,39144,41298,42087,43317,46779,47802,48640,48768,52216,
#Partially deleted in new
chr10	114179269	114231727	chr10:114179269-114231727	1	+	114187831	114231517	789624	25	147,331,59,145,106,61,105,180,144,172,87,168,108,171,243,138,111,171,276,120,117,168,47,88,242,	0,8556,11691,19903,22140,22968,23802,24118,24803,25452,26974,31311,31590,32596,34076,34707,38275,39144,41298,42087,43317,46779,48640,48768,52216,
#Partially deleted in new
chr10	114179589	114228417	chr10:114179589-114228417	1	+	114187831	114228130	789624	24	454,331,59,145,106,61,105,180,144,172,87,168,108,171,243,138,111,171,276,120,117,168,47,380,	0,8236,11371,19583,21820,22648,23482,23798,24483,25132,26654,30991,31270,32276,33756,34387,37955,38824,40978,41767,42997,46459,48320,48448,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	114239329	114289992	chr10:114239329-114289992	0	+	114239329	114239329	8553170	12	240,62,75,134,110,195,134,133,56,108,573,1055,	0,9374,14321,15585,21856,33410,38584,39389,43186,45533,46609,49608,
#Partially deleted in new
chr10	114239329	114291513	chr10:114239329-114291513	3	+	114248713	114291237	789624	14	240,62,75,134,110,195,134,133,56,108,573,552,126,296,	0,9374,14321,15585,21856,33410,38584,39389,43186,45533,46609,49608,50910,51888,
#Partially deleted in new
chr10	114239355	114289873	chr10:114239355-114289873	1	+	114284889	114289545	789624	11	214,62,75,110,195,134,133,56,112,573,936,	0,9348,14295,21830,33384,38558,39363,43160,45507,46583,49582,
#Partially deleted in new
chr10	114246073	114246714	chr10:114246073-114246714	7	+	114246073	114246073	16724991	2	144,189,	0,452,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	114280724	114281258	chr10:114280724-114281258	3	-	114280724	114280724	8553170	1	534,	0,
#Partially deleted in new
chr10	114294823	114404485	chr10:114294823-114404485	3	-	114296041	114404455	0	19	1245,123,194,156,169,246,112,146,212,105,85,90,180,206,91,95,75,129,46,	0,2154,2396,4436,5370,5621,6530,7515,9895,12981,13609,15530,19047,20736,28347,36979,38397,45779,109616,
#Partially deleted in new
chr10	114294823	114404756	chr10:114294823-114404756	1	-	114296041	114404455	0	19	1245,123,182,156,169,246,112,146,212,105,85,90,180,206,91,95,75,129,317,	0,2154,2408,4436,5370,5621,6530,7515,9895,12981,13609,15530,19047,20736,28347,36979,38397,45779,109616,
#Partially deleted in new
chr10	114294825	114302017	chr10:114294825-114302017	0	-	114294825	114294825	8553170	6	2275,194,156,169,246,664,	0,2394,4434,5368,5619,6528,
#Partially deleted in new
chr10	114300515	114305133	chr10:114300515-114305133	0	-	114300515	114300515	8553170	4	175,112,146,415,	0,838,1823,4203,
#Partially deleted in new
chr10	114310353	114404480	chr10:114310353-114404480	0	-	114310353	114404455	789624	9	90,180,206,91,95,75,129,54,41,	0,3517,5206,12817,21449,22867,30249,88497,94086,
#Partially deleted in new
chr10	114323176	114404488	chr10:114323176-114404488	0	-	114323176	114323176	8553170	6	85,95,75,129,95,49,	0,8626,10044,17426,70307,81263,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	114423769	114424067	chr10:114423769-114424067	3	-	114423769	114423769	8553170	1	298,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	114424444	114427398	chr10:114424444-114427398	3	-	114424444	114424444	8553170	1	2954,	0,
#Partially deleted in new
chr10	114431112	114684655	chr10:114431112-114684655	1	-	114436259	114684353	789624	24	5261,81,78,5,61,65,106,92,141,48,105,130,36,156,78,84,59,88,94,127,110,184,135,366,	0,6731,8063,8146,9904,10609,12916,14199,16767,20511,22266,34585,37068,41864,42766,54184,56845,60678,113892,116537,140184,144303,170714,253177,
#Partially deleted in new
chr10	114431112	114526931	chr10:114431112-114526931	1	-	114436259	114491824	789624	18	5261,81,75,8,61,65,106,92,141,48,130,36,156,78,84,59,88,272,	0,6731,8063,8969,9904,10609,12916,14199,16767,20511,34585,37068,41864,42766,54184,56845,60678,95547,
#Partially deleted in new
chr10	114431112	114684457	chr10:114431112-114684457	1	-	114436259	114684353	789624	23	5261,81,75,8,61,65,106,92,141,48,105,130,36,156,78,59,88,94,127,110,184,135,168,	0,6731,8063,8969,9904,10609,12916,14199,16767,20511,22266,34585,37068,41864,42766,56845,60678,113892,116537,140184,144303,170714,253177,
#Partially deleted in new
chr10	114431112	114684655	chr10:114431112-114684655	1	-	114436259	114684353	789624	23	5261,81,78,5,61,65,106,92,141,48,105,130,36,156,78,59,88,94,127,110,184,135,366,	0,6731,8063,8146,9904,10609,12916,14199,16767,20511,22266,34585,37068,41864,42766,56845,60678,113892,116537,140184,144303,170714,253177,
#Partially deleted in new
chr10	114435440	114526835	chr10:114435440-114526835	1	-	114436259	114491824	789624	16	933,81,75,8,61,65,106,92,141,48,130,36,156,59,88,176,	0,2403,3735,4641,5576,6281,8588,9871,12439,16183,30257,32740,37536,52517,56350,91219,
#Partially deleted in new
chr10	114435460	114526830	chr10:114435460-114526830	1	-	114436259	114491824	789624	16	913,81,78,5,61,65,106,92,141,48,130,36,156,59,88,171,	0,2383,3715,3798,5556,6261,8568,9851,12419,16163,30237,32720,37516,52497,56330,91199,
#Partially deleted in new
chr10	114435953	114685003	chr10:114435953-114685003	1	-	114436259	114684353	789624	24	420,81,75,8,61,65,106,92,147,48,105,130,36,156,78,84,59,88,94,127,110,184,135,714,	0,1890,3222,4128,5063,5768,8075,9358,11926,15670,17425,29744,32227,37023,37925,49343,52004,55837,109051,111696,135343,139462,165873,248336,
#Partially deleted in new
chr10	114436037	114658298	chr10:114436037-114658298	3	-	114436259	114658200	789624	23	336,81,75,8,61,65,106,92,141,48,105,130,36,156,78,59,88,94,127,110,184,135,342,	0,1806,3138,4044,4979,5684,7991,9274,11842,15586,17341,29660,32143,36939,37841,51920,55753,108967,111612,135259,139378,165789,221919,
#Partially deleted in new
chr10	114436177	114658283	chr10:114436177-114658283	1	-	114436259	114658200	8553170	25	196,81,75,8,61,65,106,92,141,48,105,120,130,36,156,78,48,59,88,94,127,110,184,135,327,	0,1666,2998,3904,4839,5544,7851,9134,11702,15446,17201,26867,29520,32003,36799,37701,45301,51780,55613,108827,111472,135119,139238,165649,221779,
#Partially deleted in new
chr10	114439616	114441041	chr10:114439616-114441041	0	-	114439616	114439616	8553170	2	473,25,	0,1400,
#Partially deleted in new
chr10	114450078	114487993	chr10:114450078-114487993	0	-	114450100	114487993	789624	7	57,48,130,36,156,78,36,	0,1545,15619,18102,22898,23800,37879,
#Partially deleted in new
chr10	114451644	114526918	chr10:114451644-114526918	0	-	114451644	114491824	789624	8	27,130,36,156,78,59,88,280,	0,14053,16536,21332,22234,36313,40146,74994,
#Partially deleted in new
chr10	114465464	114468265	chr10:114465464-114468265	0	-	114465464	114465464	8553170	2	363,85,	0,2716,
#Deleted in new
chr10	114501996	114502347	chr10:114501996-114502347	7	-	114501996	114501996	16724991	1	351,	0,
#Partially deleted in new
chr10	114547490	114575537	chr10:114547490-114575537	0	-	114547490	114547490	8553170	3	286,110,122,	0,23806,27925,
#Partially deleted in new
chr10	114595001	114610717	chr10:114595001-114610717	0	-	114595001	114595001	8553170	3	132,135,89,	0,6825,15627,
#Deleted in new
chr10	114690142	114690634	chr10:114690142-114690634	7	-	114690142	114690142	16724991	1	492,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	114764787	114779903	chr10:114764787-114779903	1	+	114764787	114764787	789624	3	205,220,1953,	0,11154,13163,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	114769038	114794344	chr10:114769038-114794344	3	+	114769038	114769038	8553170	4	82,224,91,309,	0,6903,8912,24997,
#Partially deleted in new
chr10	114809374	114811170	chr10:114809374-114811170	7	+	114809374	114809374	16724991	2	253,246,	0,1550,
#Partially deleted in new
chr10	114821743	114864717	chr10:114821743-114864717	3	+	114822078	114861540	789624	17	380,79,170,105,123,294,197,115,77,193,170,144,91,144,141,104,3283,	0,9108,11489,13793,14380,21189,21997,23623,24269,24431,24815,25346,26903,33453,39005,39487,39691,
#Partially deleted in new
chr10	114821743	114899832	chr10:114821743-114899832	1	+	114822078	114899514	789624	17	380,79,170,105,123,294,197,115,77,193,170,144,91,144,141,104,343,	0,9108,11489,13793,14380,21189,21997,23623,24269,24431,24815,25346,26903,33453,39005,39487,77746,
#Partially deleted in new
chr10	114821769	114833465	chr10:114821769-114833465	1	+	114822078	114833414	789624	3	354,79,233,	0,9082,11463,
#Deleted in new
chr10	114860790	114863914	chr10:114860790-114863914	0	+	114860790	114863697	789624	3	99,104,266,	0,440,2858,
#Deleted in new
chr10	114900721	114901366	chr10:114900721-114901366	7	+	114900721	114900721	16724991	1	645,	0,
#Partially deleted in new
chr10	114938192	114977676	chr10:114938192-114977676	3	+	114938253	114975379	789624	8	347,99,56,82,73,140,57,2554,	0,4452,12901,21533,32175,33942,36136,36930,
#Partially deleted in new
chr10	114938385	114960000	chr10:114938385-114960000	0	+	114938385	114938385	8553170	4	154,99,56,275,	0,4259,12708,21340,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	114969459	114969568	chr10:114969459-114969568	3	-	114969459	114969459	8553170	1	109,	0,
#Partially deleted in new
chr10	114994656	114996593	chr10:114994656-114996593	3	+	114994656	114994656	789624	3	129,96,119,	0,786,1818,
#Partially deleted in new
chr10	115093364	115171376	chr10:115093364-115171376	1	+	115093750	115171348	789624	8	679,84,114,129,209,175,88,340,	0,26820,28334,34228,35962,66675,72193,77672,
#Partially deleted in new
chr10	115093364	115171369	chr10:115093364-115171369	0	+	115093544	115096663	789624	10	272,195,84,114,129,102,209,175,88,333,	0,3280,26820,28334,34228,35042,35962,66675,72193,77672,
#Partially deleted in new
chr10	115093370	115160169	chr10:115093370-115160169	0	+	115093544	115160169	789624	6	266,84,114,129,209,130,	0,26814,28328,34222,35956,66669,
#Partially deleted in new
chr10	115093462	115171327	chr10:115093462-115171327	1	+	115093750	115171229	789624	7	581,84,114,129,209,175,291,	0,26722,28236,34130,35864,66577,77574,
#Partially deleted in new
chr10	115093624	115948992	chr10:115093624-115948992	3	+	115093750	115944779	789624	29	419,84,114,129,209,175,88,256,184,155,85,209,119,133,182,214,189,219,138,94,53,95,79,158,62,79,108,115,4335,	0,26560,28074,33968,35702,66415,71933,77412,122072,147946,171568,173172,174701,187730,192591,206409,208230,221893,240657,301034,332625,368316,373549,375547,425638,455833,633623,754252,851033,
#Partially deleted in new
chr10	115093858	115946742	chr10:115093858-115946742	0	+	115093858	115931568	8553170	30	185,84,114,129,209,175,88,256,184,155,85,209,119,133,182,214,189,219,138,94,53,95,79,158,62,79,108,115,126,2085,	0,26326,27840,33734,35468,66181,71699,77178,121838,147712,171334,172938,174467,187496,192357,206175,207996,221659,240423,300800,332391,368082,373315,375313,425404,455599,633389,754018,837669,850799,
#Partially deleted in new
chr10	115300230	115462016	chr10:115300230-115462016	0	+	115300230	115462016	789624	6	17,189,219,94,53,76,	0,1624,15287,94428,126019,161710,
#Partially deleted in new
chr10	115301972	115549527	chr10:115301972-115549527	0	+	115301972	115301972	8553170	6	71,219,94,53,62,70,	0,13545,92686,124277,217290,247485,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	115467173	115597982	chr10:115467173-115597982	0	+	115467173	115467173	8553170	5	79,158,62,79,390,	0,1998,52089,82284,130419,
#Deleted in new
chr10	115819841	115820487	chr10:115819841-115820487	7	-	115819841	115819841	16724991	1	646,	0,
#Partially deleted in new
chr10	115909350	115944959	chr10:115909350-115944959	0	+	115909350	115909350	8553170	2	227,302,	0,35307,
#Partially deleted in new
chr10	116056924	116272282	chr10:116056924-116272282	1	-	116064397	116272029	789624	9	7620,54,182,135,110,337,84,294,293,	0,8648,32816,36777,39730,68296,212578,213897,215065,
#Partially deleted in new
chr10	116056932	116273284	chr10:116056932-116273284	3	-	116064397	116272029	789624	10	7612,54,182,135,110,337,84,294,286,122,	0,8640,32808,36769,39722,68288,212570,213889,215057,216230,
#Partially deleted in new
chr10	116063763	116273467	chr10:116063763-116273467	1	-	116064397	116272029	789624	11	781,54,182,135,110,337,15,84,294,286,305,	0,1809,25977,29938,32891,61457,147867,205739,207058,208226,209399,
#Partially deleted in new
chr10	116064400	116273033	chr10:116064400-116273033	0	-	116064400	116272029	789624	11	144,54,182,135,110,337,15,84,294,286,166,	0,1172,25340,29301,32254,60820,147230,205102,206421,207589,208467,
#Deleted in new
chr10	116272003	116272643	chr10:116272003-116272643	0	-	116272003	116272003	8553170	2	272,83,	0,557,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	116274269	116281071	chr10:116274269-116281071	3	+	116274269	116274269	8553170	2	2563,285,	0,6517,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	116324427	116380029	chr10:116324427-116380029	3	+	116325011	116379358	789624	9	186,144,86,117,166,102,103,88,707,	0,519,875,16306,17608,32952,33408,53995,54895,
#Partially deleted in new
chr10	116325007	116342279	chr10:116325007-116342279	0	+	116325007	116325007	8553170	4	83,86,81,244,	0,295,15762,17028,
#Deleted in new
chr10	116340735	116342233	chr10:116340735-116342233	0	+	116340735	116340735	8553170	2	115,198,	0,1300,
#Deleted in new
chr10	116409255	116409475	chr10:116409255-116409475	7	+	116409255	116409255	16724991	1	220,	0,
#Partially deleted in new
chr10	116427866	116477957	chr10:116427866-116477957	3	+	116428012	116477153	789624	12	195,155,120,132,109,120,123,119,133,112,168,868,	0,8844,15188,16515,27855,33099,33301,38183,41318,43901,48785,49223,
#Deleted in new
chr10	116439467	116440044	chr10:116439467-116440044	7	-	116439467	116439467	16724991	1	577,	0,
#Deleted in new
chr10	116538182	116538276	chr10:116538182-116538276	3	+	116538182	116538182	8553170	1	94,	0,
#Partially deleted in new
chr10	116545930	116567855	chr10:116545930-116567855	3	+	116546092	116567798	0	13	28,46,155,123,135,112,120,120,119,130,109,165,121,	0,162,1363,2429,5167,7796,9247,9457,10069,13223,14485,15541,21804,
#Partially deleted in new
chr10	116546092	116551288	chr10:116546092-116551288	0	+	116546092	116546092	8553170	4	46,155,123,191,	0,1201,2267,5005,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	116577307	116583317	chr10:116577307-116583317	7	+	116577307	116577307	16724991	3	40,157,478,	0,1149,5532,
#Partially deleted in new
chr10	116590384	116594350	chr10:116590384-116594350	0	+	116590384	116590384	8553170	5	200,49,155,126,35,	0,745,1386,2031,3931,
#Deleted in new
chr10	116590421	116592142	chr10:116590421-116592142	0	+	116590421	116590421	8553170	3	163,49,372,	0,708,1349,
#Partially deleted in new
chr10	116590422	116595197	chr10:116590422-116595197	0	+	116590422	116590422	8553170	5	162,49,155,126,468,	0,707,1348,1993,4307,
#Deleted in new
chr10	116590424	116592565	chr10:116590424-116592565	0	+	116590424	116590424	8553170	4	160,49,155,150,	0,705,1346,1991,
#Partially deleted in new
chr10	116590424	116596322	chr10:116590424-116596322	0	+	116591129	116596322	789624	6	160,49,155,126,135,109,	0,705,1346,1991,4305,5789,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	116590958	116593188	chr10:116590958-116593188	0	+	116590958	116590958	8553170	4	37,49,155,773,	0,171,812,1457,
#Partially deleted in new
chr10	116590958	116595220	chr10:116590958-116595220	0	+	116590958	116590958	8553170	5	37,49,155,126,491,	0,171,812,1457,3771,
#Partially deleted in new
chr10	116590958	116609167	chr10:116590958-116609167	0	+	116590958	116590958	8553170	12	37,49,155,126,2007,120,120,267,130,109,168,115,	0,171,812,1457,3357,6869,7088,9088,10113,13071,14427,18094,
#Partially deleted in new
chr10	116590959	116609175	chr10:116590959-116609175	0	+	116590959	116590959	8553170	12	36,49,155,126,2004,120,120,119,130,109,168,123,	0,170,811,1456,3359,6868,7087,9087,10112,13070,14426,18093,
#Partially deleted in new
chr10	116590959	116609175	chr10:116590959-116609175	0	+	116590959	116590959	8553170	12	36,49,155,126,2004,120,128,267,130,109,168,123,	0,170,811,1456,3359,6868,7079,9087,10112,13070,14426,18093,
#Partially deleted in new
chr10	116590961	116609175	chr10:116590961-116609175	3	+	116591129	116609116	0	13	34,49,155,126,135,109,120,120,119,130,109,168,123,	0,168,809,1454,3768,5252,6866,7085,9085,10110,13068,14424,18091,
#Partially deleted in new
chr10	116590968	116609174	chr10:116590968-116609174	1	+	116591129	116609116	0	13	71,49,155,126,135,109,120,120,119,130,109,168,122,	0,161,802,1447,3761,5245,6859,7078,9078,10103,13061,14417,18084,
#Partially deleted in new
chr10	116591015	116596322	chr10:116591015-116596322	0	+	116591129	116594342	789624	6	24,49,155,126,549,109,	0,114,755,1400,3300,5198,
#Partially deleted in new
chr10	116591015	116597945	chr10:116591015-116597945	0	+	116591129	116597945	789624	6	24,49,155,126,109,118,	0,114,755,1400,5198,6812,
#Partially deleted in new
chr10	116591041	116598062	chr10:116591041-116598062	0	+	116591129	116598062	789624	6	137,155,126,25,120,16,	0,729,1374,5256,6786,7005,
#Partially deleted in new
chr10	116591050	116594499	chr10:116591050-116594499	0	+	116591050	116591050	8553170	4	128,155,126,181,	0,720,1365,3268,
#Partially deleted in new
chr10	116591079	116594794	chr10:116591079-116594794	0	+	116591129	116594794	789624	4	99,155,126,65,	0,691,1336,3650,
#Partially deleted in new
chr10	116591129	116609171	chr10:116591129-116609171	1	+	116591129	116609116	789624	12	49,155,126,139,105,120,120,119,130,109,168,119,	0,641,1286,3600,5088,6698,6917,8917,9942,12900,14256,17923,
#Partially deleted in new
chr10	116594729	116609175	chr10:116594729-116609175	0	+	116594729	116601127	789624	8	135,109,120,120,130,109,168,123,	0,1484,3098,3317,6342,9300,10656,14323,
#Partially deleted in new
chr10	116598068	116600516	chr10:116598068-116600516	0	+	116598068	116598068	8553170	2	98,470,	0,1978,
#Partially deleted in new
chr10	116620952	116645143	chr10:116620952-116645143	1	+	116621305	116645097	789624	13	26,49,155,126,135,112,120,120,119,130,112,168,110,	0,353,2992,4993,5911,6810,8990,10285,13888,15832,17416,21162,24081,
#Partially deleted in new
chr10	116620967	116627789	chr10:116620967-116627789	0	+	116620967	116620967	8553170	6	11,122,169,126,135,27,	0,338,2977,4978,5896,6795,
#Partially deleted in new
chr10	116621305	116636872	chr10:116621305-116636872	0	+	116621305	116621305	8553170	6	49,155,91,120,119,88,	0,2639,8666,9932,13535,15479,
#Partially deleted in new
chr10	116621305	116645143	chr10:116621305-116645143	3	+	116621305	116645097	0	13	49,155,126,135,112,120,120,119,130,5,107,168,110,	0,2639,4640,5558,6457,8637,9932,13535,15479,15822,17068,20809,23728,
#Partially deleted in new
chr10	116621305	116645097	chr10:116621305-116645097	1	+	116621305	116645097	789624	13	49,155,126,135,112,120,120,119,130,2,107,168,64,	0,2639,4640,5558,6457,8637,9932,13535,15479,17063,17068,20809,23728,
#Partially deleted in new
chr10	116663695	116669970	chr10:116663695-116669970	3	-	116664169	116668312	789624	5	478,187,219,66,44,	0,1065,1912,4562,6231,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	116663785	116669959	chr10:116663785-116669959	0	-	116663785	116663785	8553170	5	266,98,1066,66,33,	0,388,975,4472,6141,
#Partially deleted in new
chr10	116663798	116669955	chr10:116663798-116669955	1	-	116663905	116668312	789624	6	253,98,187,219,66,29,	0,375,962,1809,4459,6128,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	116664285	116670264	chr10:116664285-116670264	0	-	116664285	116664285	8553170	3	1541,66,184,	0,3972,5795,
#Deleted in new
chr10	116670102	116672739	chr10:116670102-116672739	3	+	116670102	116670102	8553170	3	176,67,535,	0,316,2102,
#Partially deleted in new
chr10	116671191	116742574	chr10:116671191-116742574	3	-	116674780	116742469	789624	12	4227,104,259,105,87,172,117,105,187,128,86,145,	0,5207,8311,9960,10599,12599,21159,27443,29751,33959,36008,71238,
#Partially deleted in new
chr10	116671191	116849741	chr10:116671191-116849741	1	-	116674780	116849568	789624	13	4227,104,259,105,87,172,117,105,187,128,86,88,176,	0,5207,8311,9960,10599,12599,21159,27443,29751,33959,36008,163743,178374,
#Partially deleted in new
chr10	116683455	116692467	chr10:116683455-116692467	0	-	116683719	116692467	789624	2	507,117,	0,8895,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	116698143	116701085	chr10:116698143-116701085	0	-	116698143	116698143	8553170	2	596,143,	0,2799,
#Partially deleted in new
chr10	116700953	116708246	chr10:116700953-116708246	0	-	116700953	116708059	789624	4	176,128,86,206,	0,4197,6246,7087,
#Partially deleted in new
chr10	116749904	116751261	chr10:116749904-116751261	7	+	116749904	116749904	16724991	2	784,97,	0,1260,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	116828763	116849701	chr10:116828763-116849701	0	-	116828763	116828763	8553170	4	4610,88,60,136,	0,6171,6434,20802,
#Partially deleted in new
chr10	116833066	116850236	chr10:116833066-116850236	0	-	116833066	116833066	8553170	3	307,88,146,	0,1868,17024,
#Partially deleted in new
chr10	116849511	116882601	chr10:116849511-116882601	3	+	116849566	116881669	789624	14	220,129,191,149,170,132,54,57,168,126,196,68,118,1087,	0,6111,6980,9478,11282,11547,13287,19138,21613,24564,26553,29779,30357,32003,
#Partially deleted in new
chr10	116849511	116882527	chr10:116849511-116882527	1	+	116849566	116881669	789624	7	220,57,168,196,68,118,1013,	0,19138,21613,26553,29779,30357,32003,
#Partially deleted in new
chr10	116849582	116856628	chr10:116849582-116856628	0	+	116849582	116856628	789624	3	149,129,137,	0,6040,6909,
#Partially deleted in new
chr10	116859033	116911788	chr10:116859033-116911788	1	+	116860864	116911572	789624	11	105,170,132,54,57,168,126,196,68,118,290,	0,1760,2025,3765,9616,12091,15042,17031,20257,20835,52465,
#Partially deleted in new
chr10	116881481	117005365	chr10:116881481-117005365	3	-	116886554	117005079	789624	15	5085,54,110,83,100,154,147,95,82,98,169,95,61,53,344,	0,30308,33893,39952,46310,48367,58984,63442,67434,70427,72560,78654,87170,97774,123540,
#Partially deleted in new
chr10	116883376	117005577	chr10:116883376-117005577	1	-	116886343	116960222	789624	16	3190,193,121,54,110,83,100,154,147,95,82,98,169,95,61,556,	0,18388,23250,28413,31998,38057,44415,46472,57089,61547,65539,68532,70665,76759,85275,121645,
#Partially deleted in new
chr10	116883376	117005577	chr10:116883376-117005577	1	-	116886343	117005079	789624	17	3190,193,121,54,110,83,100,154,147,95,82,98,169,95,61,53,556,	0,18388,23250,28413,31998,38057,44415,46472,57089,61547,65539,68532,70665,76759,85275,95879,121645,
#Partially deleted in new
chr10	116884796	116974170	chr10:116884796-116974170	0	-	116884796	116884796	8553170	16	1770,193,121,54,110,83,100,154,147,95,82,98,169,95,61,315,	0,16968,21830,26993,30578,36637,42995,45052,55669,60127,64119,67112,69245,75339,83855,89059,
#Partially deleted in new
chr10	116900311	117126586	chr10:116900311-117126586	1	-	116900536	116960222	789624	18	229,193,121,54,110,83,100,154,147,95,82,98,169,95,61,53,66,280,	0,1453,6315,11478,15063,21122,27480,29537,40154,44612,48604,51597,53730,59824,68340,78944,148133,225995,
#Partially deleted in new
chr10	116900311	117005577	chr10:116900311-117005577	1	-	116900536	117005079	789624	17	229,193,121,54,110,83,100,154,147,95,82,98,169,95,61,53,556,	0,1453,6315,11478,15063,21122,27480,29537,40154,44612,48604,51597,53730,59824,68340,78944,104710,
#Partially deleted in new
chr10	116954048	116960331	chr10:116954048-116960331	0	-	116954048	116954048	8553170	2	162,196,	0,6087,
#Partially deleted in new
chr10	117023673	117023851	chr10:117023673-117023851	7	-	117023673	117023673	16724991	1	178,	0,
#Deleted in new
chr10	117128520	117138301	chr10:117128520-117138301	1	-	117132208	117138056	789624	4	3782,38,188,486,	0,3919,7951,9295,
#Deleted in new
chr10	117133289	117138056	chr10:117133289-117138056	3	-	117134007	117138056	789624	3	1294,188,241,	0,3182,4526,
#Partially deleted in new
chr10	117158655	117169059	chr10:117158655-117169059	3	-	117158655	117158655	789624	2	2185,200,	0,10204,
#Deleted in new
chr10	117167677	117167774	chr10:117167677-117167774	3	-	117167677	117167677	5263520	1	97,	0,
#Deleted in new
chr10	117196167	117196654	chr10:117196167-117196654	7	-	117196167	117196167	16724991	1	487,	0,
#Partially deleted in new
chr10	117197488	117210299	chr10:117197488-117210299	3	+	117197488	117210299	789624	3	223,129,803,	0,3670,12008,
#Deleted in new
chr10	117239599	117241923	chr10:117239599-117241923	3	-	117239599	117239599	8553170	3	582,123,39,	0,2061,2285,
#Partially deleted in new
chr10	117241072	117279430	chr10:117241072-117279430	3	+	117241693	117277266	789624	16	148,136,343,59,84,93,90,44,61,96,79,52,64,120,134,2269,	0,606,2898,12326,12975,13332,14204,14406,14524,16724,25660,25911,26600,28998,29257,36089,
#Partially deleted in new
chr10	117241092	117279430	chr10:117241092-117279430	0	+	117241092	117241092	8553170	15	128,136,343,59,450,90,44,61,96,79,52,64,120,134,2269,	0,586,2878,12306,12955,14184,14386,14504,16704,25640,25891,26580,28978,29237,36069,
#Partially deleted in new
chr10	117241113	117279430	chr10:117241113-117279430	1	+	117241693	117277266	789624	16	107,136,343,59,84,93,90,44,61,96,79,52,64,120,134,2269,	0,565,2857,12285,12934,13291,14163,14365,14483,16683,25619,25870,26559,28957,29216,36048,
#Deleted in new
chr10	117267115	117268668	chr10:117267115-117268668	3	-	117267115	117267115	8553170	1	1553,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	117277273	117375467	chr10:117277273-117375467	3	-	117283267	117375227	789624	5	8198,163,103,123,1112,	0,12912,41598,63706,97082,
#Partially deleted in new
chr10	117284306	117314235	chr10:117284306-117314235	0	-	117284306	117284306	8553170	3	1165,163,72,	0,5879,29857,
#Partially deleted in new
chr10	117285107	117318978	chr10:117285107-117318978	0	-	117285107	117285107	8553170	4	364,106,163,107,	0,586,5078,33764,
#Partially deleted in new
chr10	117290185	117374481	chr10:117290185-117374481	0	-	117290185	117290185	8553170	2	163,126,	0,84170,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	117425193	117490419	chr10:117425193-117490419	3	+	117425193	117425193	8553170	3	159,109,258,	0,11022,64968,
#Partially deleted in new
chr10	117473214	117477173	chr10:117473214-117477173	1	-	117473214	117473214	8553170	2	208,817,	0,3142,
#Partially deleted in new
chr10	117473214	117542319	chr10:117473214-117542319	0	-	117473214	117473214	8553170	3	208,89,223,	0,18806,68882,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	117473236	117486228	chr10:117473236-117486228	0	-	117473236	117473236	8553170	2	186,276,	0,12716,
#Partially deleted in new
chr10	117473298	117476919	chr10:117473298-117476919	0	-	117473298	117473298	8553170	2	124,464,	0,3157,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	117484294	117542495	chr10:117484294-117542495	0	-	117484294	117484294	789624	3	6617,89,399,	0,7726,57802,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	117484294	117545068	chr10:117484294-117545068	3	-	117484294	117484294	789624	4	6617,89,71,503,	0,7726,60011,60271,
#Partially deleted in new
chr10	117490648	117494688	chr10:117490648-117494688	0	-	117490648	117490648	8553170	3	263,89,120,	0,1372,3920,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	117542443	117549546	chr10:117542443-117549546	3	+	117543267	117548232	789624	3	1230,185,1482,	0,3188,5621,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	117542444	117549545	chr10:117542444-117549545	1	+	117543267	117548168	789624	2	1229,1481,	0,5620,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	117543567	117549542	chr10:117543567-117549542	0	+	117543567	117548168	789624	2	106,1478,	0,4497,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	117544865	117548799	chr10:117544865-117548799	0	+	117544865	117544865	8553170	3	365,185,735,	0,766,3199,
#Partially deleted in new
chr10	117562083	117572457	chr10:117562083-117572457	3	-	117562083	117562083	8553170	3	184,129,162,	0,3932,10212,
#Deleted in new
chr10	117735312	117736407	chr10:117735312-117736407	3	+	117735312	117735312	8553170	2	39,205,	0,890,
#Deleted in new
chr10	117825902	117830518	chr10:117825902-117830518	3	-	117825902	117825902	8553170	5	277,113,79,111,52,	0,369,1158,2902,4564,
#Partially deleted in new
chr10	118004915	118046603	chr10:118004915-118046603	3	-	118008997	118046163	0	5	4310,46,469,443,793,	0,10149,34056,35207,40895,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	118004947	118046592	chr10:118004947-118046592	1	-	118008997	118046163	0	6	4278,46,60,469,443,782,	0,10117,29034,34024,35175,40863,
#Deleted in new
chr10	118005755	118015110	chr10:118005755-118015110	0	-	118005755	118005755	8553170	3	83,144,46,	0,3326,9309,
#Partially deleted in new
chr10	118017486	118045810	chr10:118017486-118045810	3	+	118017486	118017486	8553170	3	163,197,535,	0,22659,27789,
#Deleted in new
chr10	118017518	118018299	chr10:118017518-118018299	0	+	118017518	118017518	8553170	1	781,	0,
#Deleted in new
chr10	118038923	118040312	chr10:118038923-118040312	0	-	118038923	118038923	8553170	2	517,190,	0,1199,
#Deleted in new
chr10	118039730	118045296	chr10:118039730-118045296	0	+	118039730	118039730	8553170	4	243,197,125,21,	0,415,3710,5545,
#Deleted in new
chr10	118039736	118045333	chr10:118039736-118045333	0	+	118039736	118039736	8553170	3	606,125,58,	0,3704,5539,
#Partially deleted in new
chr10	118046278	118206659	chr10:118046278-118206659	0	+	118046278	118046278	8553170	4	369,106,66,138,	0,3233,5852,160243,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	118046823	118210153	chr10:118046823-118210153	3	+	118046823	118046823	789624	5	280,106,66,100,2718,	0,2688,5307,159698,160612,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	118046993	118056225	chr10:118046993-118056225	1	+	118046993	118046993	8553170	4	110,106,66,2950,	0,2518,5137,6282,
#Partially deleted in new
chr10	118047003	118100139	chr10:118047003-118100139	1	+	118047003	118047003	789624	4	100,106,66,1944,	0,2508,5127,51192,
#Partially deleted in new
chr10	118047023	118206989	chr10:118047023-118206989	0	+	118047023	118047023	8553170	4	80,106,66,468,	0,2488,5107,159498,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	118049613	118207820	chr10:118049613-118207820	0	+	118049613	118049613	8553170	3	4,66,385,	0,2517,157822,
#Deleted in new
chr10	118204288	118206581	chr10:118204288-118206581	0	+	118204288	118204288	8553170	2	429,60,	0,2233,
#Deleted in new
chr10	118204752	118206581	chr10:118204752-118206581	0	+	118204752	118204752	8553170	2	702,60,	0,1769,
#Deleted in new
chr10	118241563	118242074	chr10:118241563-118242074	0	+	118241563	118241563	8553170	2	119,292,	0,219,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	118241642	118247873	chr10:118241642-118247873	1	+	118241642	118241642	8553170	5	40,104,87,88,175,	0,140,3705,3903,6056,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	118241644	118247873	chr10:118241644-118247873	0	+	118241644	118241644	8553170	4	38,104,87,175,	0,138,3703,6054,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	118241651	118267710	chr10:118241651-118267710	3	+	118241651	118241651	8553170	4	31,87,145,293,	0,3696,6047,25766,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	118297929	118342320	chr10:118297929-118342320	3	-	118310856	118336415	789624	9	12979,107,90,100,31,88,242,201,51,	0,13277,28224,37184,37466,37624,38252,43797,44340,
#Deleted in new
chr10	118308605	118309580	chr10:118308605-118309580	0	-	118308605	118308605	8553170	3	260,52,46,	0,475,929,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	118310413	118311486	chr10:118310413-118311486	0	-	118310413	118310413	8553170	2	495,280,	0,793,
#Partially deleted in new
chr10	118310635	118326349	chr10:118310635-118326349	0	-	118310635	118310635	8553170	3	273,107,196,	0,571,15518,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	118310719	118342315	chr10:118310719-118342315	0	-	118310719	118310719	8553170	9	189,107,107,90,100,88,242,201,46,	0,487,11585,15434,24394,24834,25462,31007,31550,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	118310719	118342315	chr10:118310719-118342315	0	-	118311303	118336415	789624	9	189,107,107,90,100,31,88,242,46,	0,487,11585,15434,24394,24676,24834,25462,31550,
#Partially deleted in new
chr10	118310745	118342320	chr10:118310745-118342320	1	-	118310856	118336415	789624	8	163,107,90,100,31,88,242,51,	0,461,15408,24368,24650,24808,25436,31524,
#Partially deleted in new
chr10	118335113	118342240	chr10:118335113-118342240	0	-	118335113	118336415	789624	5	100,31,88,242,514,	0,282,440,1068,6613,
#Partially deleted in new
chr10	118335257	118341746	chr10:118335257-118341746	0	-	118335257	118335257	8553170	3	384,242,20,	0,924,6469,
#Partially deleted in new
chr10	118336024	118342328	chr10:118336024-118342328	0	-	118336024	118336024	8553170	3	399,201,59,	0,5702,6245,
#Deleted in new
chr10	118357107	118359203	chr10:118357107-118359203	1	+	118357107	118357107	789624	3	51,322,207,	0,419,1889,
#Deleted in new
chr10	118357544	118359203	chr10:118357544-118359203	0	+	118357544	118357544	8553170	3	34,77,207,	0,227,1452,
#Partially deleted in new
chr10	118357558	118365103	chr10:118357558-118365103	3	+	118357558	118357558	8553170	3	20,77,391,	0,213,7154,
#Partially deleted in new
chr10	118357754	118365103	chr10:118357754-118365103	0	+	118357754	118357754	8553170	2	94,391,	0,6958,
#Deleted in new
chr10	118572870	118573620	chr10:118572870-118573620	7	+	118572870	118572870	16724991	2	349,105,	0,645,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	118589988	118595699	chr10:118589988-118595699	3	-	118594131	118595244	789624	2	5262,184,	0,5527,
#Partially deleted in new
chr10	118594094	118595369	chr10:118594094-118595369	1	-	118594131	118595244	789624	1	1275,	0,
#Deleted in new
chr10	118643759	118644198	chr10:118643759-118644198	7	+	118643759	118643759	16724991	1	439,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	118674166	118726385	chr10:118674166-118726385	0	-	118674166	118674166	8553170	8	294,186,44,139,90,103,96,108,	0,11816,12431,17098,20974,27139,33325,52111,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	118676410	118755246	chr10:118676410-118755246	3	-	118686127	118754762	789624	9	9758,44,139,90,103,96,103,127,851,	0,10187,14854,18730,24895,31081,52884,53873,77985,
#Partially deleted in new
chr10	118684555	118755249	chr10:118684555-118755249	0	-	118693723	118754762	789624	10	1613,44,139,48,90,103,96,103,127,854,	0,2042,6709,9146,10585,16750,22936,44739,45728,69840,
#Deleted in new
chr10	118685958	118686781	chr10:118685958-118686781	0	-	118685958	118685958	8553170	2	210,184,	0,639,
#Partially deleted in new
chr10	118685996	118691565	chr10:118685996-118691565	0	-	118685996	118685996	8553170	3	172,44,301,	0,601,5268,
#Deleted in new
chr10	118692360	118693535	chr10:118692360-118693535	3	-	118692360	118692360	8553170	1	1175,	0,
#Partially deleted in new
chr10	118694920	118707513	chr10:118694920-118707513	0	-	118694920	118694920	8553170	3	310,103,22,	0,6385,12571,
#Partially deleted in new
chr10	118729174	118754477	chr10:118729174-118754477	0	-	118729174	118729174	8553170	3	223,127,82,	0,1109,25221,
#Partially deleted in new
chr10	118872053	118872602	chr10:118872053-118872602	7	-	118872053	118872053	16724991	1	549,	0,
#Deleted in new
chr10	118932673	118933295	chr10:118932673-118933295	7	-	118932673	118932673	16724991	1	622,	0,
#Deleted in new
chr10	119003535	119003884	chr10:119003535-119003884	3	-	119003535	119003535	8553170	2	139,90,	0,259,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	119029715	119033732	chr10:119029715-119033732	3	+	119029801	119030680	0	1	4017,	0,
#Deleted in new
chr10	119030425	119031533	chr10:119030425-119031533	0	+	119030425	119030680	789624	1	1108,	0,
#Partially deleted in new
chr10	119033669	119080804	chr10:119033669-119080804	3	-	119036038	119080676	0	22	2599,191,202,779,89,185,154,123,114,105,348,186,117,99,105,172,209,200,164,137,191,177,	0,3449,4568,8324,10384,16131,16851,17529,23070,23266,24286,25542,25932,27076,27554,31729,35776,37216,39220,39771,40077,46958,
#Partially deleted in new
chr10	119035792	119080823	chr10:119035792-119080823	1	-	119036038	119080676	0	23	191,238,191,202,779,89,185,154,123,114,105,348,186,117,99,105,172,209,200,164,137,191,196,	0,238,1326,2445,6201,8261,14008,14728,15406,20947,21143,22163,23419,23809,24953,25431,29606,33653,35093,37097,37648,37954,44835,
#Partially deleted in new
chr10	119056875	119059890	chr10:119056875-119059890	0	-	119056875	119056875	8553170	3	165,348,679,	0,1080,2336,
#Deleted in new
chr10	119060010	119060138	chr10:119060010-119060138	3	-	119060010	119060010	789624	1	128,	0,
#Deleted in new
chr10	119060982	119061111	chr10:119060982-119061111	3	-	119060982	119060982	8553170	1	129,	0,
#Partially deleted in new
chr10	119093139	119093341	chr10:119093139-119093341	7	+	119093139	119093139	16724991	1	202,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	119104085	119105643	chr10:119104085-119105643	1	+	119104142	119104801	8553170	2	112,880,	0,678,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	119104091	119108096	chr10:119104091-119108096	0	+	119104091	119104091	8553170	4	106,259,185,149,	0,672,1219,3856,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	119104094	119111928	chr10:119104094-119111928	0	+	119104094	119104094	8553170	5	103,259,185,197,80,	0,669,1216,3873,7754,
#Partially deleted in new
chr10	119104103	119129612	chr10:119104103-119129612	0	+	119104103	119104103	8553170	7	94,217,80,149,112,101,98,	0,3844,7745,13415,16237,19365,25411,
#Partially deleted in new
chr10	119104116	119137195	chr10:119104116-119137195	3	+	119104142	119136647	789624	9	81,197,80,149,112,101,108,95,725,	0,3851,7732,13402,16224,19352,25398,28398,32354,
#Partially deleted in new
chr10	119104116	119129546	chr10:119104116-119129546	0	+	119104116	119104116	8553170	6	81,217,149,112,101,32,	0,3831,13402,16224,19352,25398,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	119104116	119137826	chr10:119104116-119137826	1	+	119117519	119136647	789624	12	81,243,185,197,122,80,149,112,101,108,95,1356,	0,647,1194,3851,6076,7732,13402,16224,19352,25398,28398,32354,
#Partially deleted in new
chr10	119114104	119137984	chr10:119114104-119137984	0	+	119114104	119114104	8553170	7	507,149,112,101,108,95,1514,	0,3414,6236,9364,15410,18410,22366,
#Partially deleted in new
chr10	119120381	119137180	chr10:119120381-119137180	0	+	119120381	119120381	8553170	5	71,101,108,95,124,	0,3087,9133,12133,16675,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	119129474	119135180	chr10:119129474-119135180	0	+	119129474	119129474	8553170	3	148,1614,735,	0,3040,4971,
#Deleted in new
chr10	119136516	119137174	chr10:119136516-119137174	0	+	119136516	119136516	8553170	2	404,118,	0,540,
#Partially deleted in new
chr10	119140766	119156756	chr10:119140766-119156756	0	-	119140766	119140766	8553170	5	553,118,86,116,79,	0,5469,7008,14295,15911,
#Partially deleted in new
chr10	119140912	119165667	chr10:119140912-119165667	3	-	119141241	119165647	789624	14	407,118,86,116,79,66,57,54,26,55,27,75,66,131,	0,5323,6862,14149,15765,16755,16958,17096,18815,20002,20142,21427,23218,24624,
#Partially deleted in new
chr10	119140912	119155123	chr10:119140912-119155123	0	-	119140912	119140912	8553170	3	407,86,62,	0,6862,14149,
#Partially deleted in new
chr10	119141255	119165654	chr10:119141255-119165654	0	-	119141255	119141255	8553170	15	64,118,86,116,79,66,57,54,26,55,27,22,75,66,118,	0,4980,6519,13806,15422,16412,16615,16753,18472,19659,19799,20883,21084,22875,24281,
#Partially deleted in new
chr10	119146289	119165563	chr10:119146289-119165563	0	-	119146289	119159739	789624	13	64,86,116,79,66,57,54,26,55,27,75,66,362,	0,1485,8772,10388,11378,11581,11719,13438,14625,14765,16050,17841,18912,
#Partially deleted in new
chr10	119147777	119165623	chr10:119147777-119165623	0	-	119147777	119147777	8553170	11	83,116,79,66,57,54,26,55,75,66,87,	0,7284,8900,9890,10093,10231,11950,13137,14562,16353,17759,
#Partially deleted in new
chr10	119157668	119165542	chr10:119157668-119165542	0	-	119157668	119159739	789624	8	65,57,54,26,55,75,66,341,	0,202,340,2059,3246,4671,6462,7533,
#Partially deleted in new
chr10	119158006	119164196	chr10:119158006-119164196	0	-	119158006	119158006	8553170	5	56,26,55,75,66,	0,1721,2908,4333,6124,
#Partially deleted in new
chr10	119167702	119178833	chr10:119167702-119178833	3	-	119168479	119178790	0	7	831,166,104,136,142,133,79,	0,1474,4679,6034,6748,9318,11052,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	119168068	119170988	chr10:119168068-119170988	0	-	119168068	119168068	8553170	2	465,1812,	0,1108,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	119173744	119174772	chr10:119173744-119174772	0	-	119173744	119173744	8553170	2	128,322,	0,706,
#Partially deleted in new
chr10	119207588	119455619	chr10:119207588-119455619	3	+	119207917	119455067	0	16	381,96,113,78,101,93,64,141,191,38,90,209,138,138,132,651,	0,118927,173226,189106,215577,217404,222786,223798,229062,232142,234410,235955,240534,245082,245556,247380,
#Deleted in new
chr10	119208530	119211760	chr10:119208530-119211760	3	+	119208530	119208530	8553170	2	120,280,	0,2950,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	119212856	119213146	chr10:119212856-119213146	3	+	119212856	119212856	8553170	1	290,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	119330232	119335957	chr10:119330232-119335957	0	-	119330232	119330232	8553170	3	117,527,37,	0,3067,5688,
#Partially deleted in new
chr10	119333180	119335957	chr10:119333180-119335957	0	-	119333180	119333180	8553170	2	646,37,	0,2740,
#Partially deleted in new
chr10	119334493	119336182	chr10:119334493-119336182	3	-	119334493	119334493	8553170	2	499,262,	0,1427,
#Deleted in new
chr10	119377971	119378043	chr10:119377971-119378043	3	+	119377971	119377971	5263520	1	72,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	119452447	119459742	chr10:119452447-119459742	0	+	119452447	119452447	8553170	3	361,132,4774,	0,697,2521,
#Partially deleted in new
chr10	119499827	119536533	chr10:119499827-119536533	1	-	119500112	119536470	0	5	432,144,87,119,70,	0,15681,26204,27478,36636,
#Partially deleted in new
chr10	119499924	119527477	chr10:119499924-119527477	1	-	119500112	119527449	0	4	335,144,87,172,	0,15584,26107,27381,
#Partially deleted in new
chr10	119499924	119542708	chr10:119499924-119542708	3	-	119500112	119542638	0	5	335,144,87,119,119,	0,15584,26107,27381,42665,
#Partially deleted in new
chr10	119500079	119526094	chr10:119500079-119526094	0	-	119500079	119500079	8553170	3	180,73,63,	0,15303,25952,
#Partially deleted in new
chr10	119515522	119516488	chr10:119515522-119516488	0	-	119515522	119515522	8553170	2	130,155,	0,811,
#Deleted in new
chr10	119562100	119562530	chr10:119562100-119562530	7	-	119562100	119562100	16724991	1	430,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	119571801	119596495	chr10:119571801-119596495	1	-	119575664	119596465	0	12	3990,140,124,85,96,109,76,88,55,150,97,62,	0,4809,5278,5649,5839,6924,8133,10120,10367,10657,16350,24632,
#Deleted in new
chr10	119575218	119577214	chr10:119575218-119577214	0	-	119575218	119575218	8553170	4	573,140,59,135,	0,1392,1628,1861,
#Partially deleted in new
chr10	119575398	119596964	chr10:119575398-119596964	0	-	119575398	119575398	789624	11	393,593,85,96,109,76,88,55,99,97,531,	0,1212,2052,2242,3327,4536,6523,6770,7060,12753,21035,
#Partially deleted in new
chr10	119575411	119597029	chr10:119575411-119597029	0	-	119580809	119596465	789624	13	380,140,124,85,96,109,76,376,88,55,99,97,596,	0,1199,1668,2039,2229,3314,4523,5059,6510,6757,7047,12740,21022,
#Partially deleted in new
chr10	119575424	119593513	chr10:119575424-119593513	0	-	119575424	119575424	789624	11	367,593,85,96,109,76,88,55,99,97,62,	0,1186,2026,2216,3301,4510,6497,6744,7034,12727,18027,
#Partially deleted in new
chr10	119575436	119596510	chr10:119575436-119596510	3	-	119575664	119596465	0	12	355,140,124,85,96,109,76,88,55,99,97,77,	0,1174,1643,2014,2204,3289,4498,6485,6732,7022,12715,20997,
#Partially deleted in new
chr10	119576775	119580782	chr10:119576775-119580782	0	-	119576775	119576775	8553170	5	428,85,96,109,848,	0,675,865,1950,3159,
#Partially deleted in new
chr10	119577474	119578940	chr10:119577474-119578940	0	-	119577474	119577474	8553170	3	61,96,215,	0,166,1251,
#Partially deleted in new
chr10	119578746	119582184	chr10:119578746-119582184	0	-	119578746	119578746	8553170	5	88,76,68,88,16,	0,1188,1724,3175,3422,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	119578766	119588357	chr10:119578766-119588357	0	-	119578766	119588163	789624	7	68,76,88,55,99,97,32,	0,1168,3155,3402,3692,9385,9559,
#Partially deleted in new
chr10	119581732	119588210	chr10:119581732-119588210	0	-	119581917	119588163	789624	4	277,55,99,59,	0,436,726,6419,
#Partially deleted in new
chr10	119582530	119593494	chr10:119582530-119593494	0	-	119582530	119582530	8553170	4	78,97,42,43,	0,5621,9724,10921,
#Partially deleted in new
chr10	119588166	119596632	chr10:119588166-119596632	0	-	119593458	119596465	789624	4	82,138,66,199,	0,3809,5281,8267,
#Partially deleted in new
chr10	119621067	119621880	chr10:119621067-119621880	7	+	119621067	119621067	16724991	1	813,	0,
#Partially deleted in new
chr10	119638455	119639082	chr10:119638455-119639082	7	+	119638455	119638455	16724991	1	627,	0,
#Partially deleted in new
chr10	119651369	119677819	chr10:119651369-119677819	3	+	119651675	119677282	789624	4	486,327,402,1356,	0,18481,20885,25094,
#Partially deleted in new
chr10	119656609	119676707	chr10:119656609-119676707	0	+	119657562	119676707	789624	5	67,109,327,402,241,	0,850,13241,15645,19857,
#Partially deleted in new
chr10	119683126	119683823	chr10:119683126-119683823	7	-	119683126	119683126	16724991	2	83,288,	0,409,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr10	119726041	119829130	chr10:119726041-119829130	0	+	119726262	119751082	8553170	21	318,37,81,137,129,168,57,199,180,68,125,78,121,129,118,199,72,74,129,88,2500,	0,1391,25034,55593,65475,65827,66115,70673,71419,72501,78131,79342,80318,81890,84058,85715,94804,96389,97029,97773,100589,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr10	119726043	119829096	chr10:119726043-119829096	0	+	119726262	119781068	8553170	21	316,81,182,137,129,168,55,199,180,68,125,78,121,129,118,199,72,74,129,88,2466,	0,25032,55017,55591,65473,65825,66113,70671,71417,72499,78129,79340,80316,81888,84056,85713,94802,96387,97027,97771,100587,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr10	119726047	119829278	chr10:119726047-119829278	3	+	119726262	119827780	0	20	312,81,137,129,168,57,199,180,68,125,78,121,129,118,199,72,74,129,88,2648,	0,25028,55587,65469,65821,66109,70667,71413,72495,78125,79336,80312,81884,84052,85709,94798,96383,97023,97767,100583,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr10	119726053	119828681	chr10:119726053-119828681	1	+	119726262	119826713	8553170	19	306,81,137,129,168,57,199,180,68,125,78,121,129,118,199,72,74,129,2051,	0,25022,55581,65463,65815,66103,70661,71407,72489,78119,79330,80306,81878,84046,85703,94792,96377,97017,100577,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr10	119726081	119828935	chr10:119726081-119828935	0	+	119726262	119807931	8553170	19	278,81,137,129,168,57,199,180,68,125,78,193,118,199,72,74,129,88,2305,	0,24994,55553,65435,65787,66075,70633,71379,72461,78091,79302,81786,84018,85675,94764,96349,96989,97733,100549,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr10	119726084	119829147	chr10:119726084-119829147	1	+	119726262	119827780	8553170	20	275,81,137,129,168,57,199,180,68,125,78,121,129,118,199,72,74,129,88,2517,	0,24991,55550,65432,65784,66072,70630,71376,72458,78088,79299,80275,81847,84015,85672,94761,96346,96986,97730,100546,
#Partially deleted in new
chr10	119726109	119828620	chr10:119726109-119828620	0	+	119726262	119781162	8553170	22	250,81,83,182,137,129,168,57,199,180,68,125,78,121,129,118,146,72,74,129,88,1990,	0,24966,31785,54951,55525,65407,65759,66047,70605,71351,72433,78063,79274,80250,81822,83990,85700,94736,96321,96961,97705,100521,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr10	119726138	119829096	chr10:119726138-119829096	0	+	119726262	119759871	8553170	23	221,81,86,212,182,137,129,168,57,199,180,68,125,78,121,129,118,199,72,74,129,88,2466,	0,24937,31753,33718,54922,55496,65378,65730,66018,70576,71322,72404,78034,79245,80221,81793,83961,85618,94707,96292,96932,97676,100492,
#Partially deleted in new
chr10	119726161	119792197	chr10:119726161-119792197	1	+	119726262	119792084	0	5	198,81,137,129,329,	0,24914,55473,65355,65707,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr10	119726207	119829127	chr10:119726207-119829127	0	+	119726262	119791873	8553170	18	152,81,168,57,199,180,68,125,78,121,129,118,199,72,74,129,88,2497,	0,24868,65661,65949,70507,71253,72335,77965,79176,80152,81724,83892,85549,94638,96223,96863,97607,100423,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr10	119726245	119828878	chr10:119726245-119828878	1	+	119726262	119827780	8553170	18	114,81,137,168,199,180,68,125,78,121,129,118,199,72,74,129,88,2248,	0,24830,55389,65623,70469,71215,72297,77927,79138,80114,81686,83854,85511,94600,96185,96825,97569,100385,
#Partially deleted in new
chr10	119726281	119751199	chr10:119726281-119751199	0	+	119726281	119726281	8553170	2	78,124,	0,24794,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr10	119726303	119828681	chr10:119726303-119828681	0	+	119726303	119759871	8553170	22	56,81,86,212,137,129,168,57,199,180,68,125,78,121,129,118,199,72,74,129,88,2051,	0,24772,31588,33553,55331,65213,65565,65853,70411,71157,72239,77869,79080,80056,81628,83796,85453,94542,96127,96767,97511,100327,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr10	119726529	119828993	chr10:119726529-119828993	1	+	119781744	119827780	8553170	21	327,81,182,137,129,168,57,199,180,68,125,78,121,129,118,199,72,74,129,88,2363,	0,24546,54531,55105,64987,65339,65627,70185,70931,72013,77643,78854,79830,81402,83570,85227,94316,95901,96541,97285,100101,
#Partially deleted in new
chr10	119750870	119823881	chr10:119750870-119823881	0	+	119781744	119823881	8553170	19	72,81,137,129,168,57,199,180,68,125,78,121,129,118,199,72,74,129,67,	0,205,30764,40646,40998,41286,45844,46590,47672,53302,54513,55489,57061,59229,60886,69975,71560,72200,72944,
#Partially deleted in new
chr10	119750876	119828360	chr10:119750876-119828360	1	+	119781744	119827780	8553170	19	280,137,129,168,57,199,180,68,125,78,121,129,118,199,72,74,129,88,1730,	0,30758,40640,40992,41280,45838,46584,47666,53296,54507,55483,57055,59223,60880,69969,71554,72194,72938,75754,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	119768246	119768538	chr10:119768246-119768538	3	+	119768246	119768246	8553170	1	292,	0,
#Partially deleted in new
chr10	119793588	119815958	chr10:119793588-119815958	7	-	119793588	119793588	16724991	3	29,130,614,	0,20899,21756,
#Deleted in new
chr10	119815228	119816642	chr10:119815228-119816642	5	-	119815228	119815228	16724991	1	1414,	0,
#Partially deleted in new
chr10	119818685	119826771	chr10:119818685-119826771	0	+	119823111	119826771	789624	7	59,20,72,74,129,88,141,	0,834,2160,3745,4385,5129,7945,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	119818715	119829147	chr10:119818715-119829147	1	+	119819483	119827780	0	6	824,72,74,129,88,2517,	0,2130,3715,4355,5099,7915,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	119818726	119829147	chr10:119818726-119829147	1	+	119819483	119827780	789624	6	813,72,74,129,88,2517,	0,2119,3704,4344,5088,7904,
#Partially deleted in new
chr10	119818809	119823819	chr10:119818809-119823819	0	+	119818812	119823819	789624	6	252,20,72,74,129,5,	0,710,2036,3621,4261,5005,
#Deleted in new
chr10	119818865	119819133	chr10:119818865-119819133	7	+	119818865	119818865	16724991	1	268,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	119819295	119829124	chr10:119819295-119829124	1	+	119819483	119825994	789624	7	244,72,74,129,88,67,2494,	0,1550,3135,3775,4519,6656,7335,
#Partially deleted in new
chr10	119819446	119826702	chr10:119819446-119826702	0	+	119823111	119826702	789624	7	93,68,72,74,129,88,72,	0,320,1399,2984,3624,4368,7184,
#Partially deleted in new
chr10	119819506	119823897	chr10:119819506-119823897	0	+	119823111	119823897	789624	5	328,72,74,129,83,	0,1339,2924,3564,4308,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr10	119829403	119872754	chr10:119829403-119872754	3	-	119831473	119872584	0	16	2197,89,165,134,166,118,124,179,101,152,145,102,42,141,86,228,	0,2608,6136,7492,9131,11439,13068,13844,18209,20021,23646,27934,29480,29637,30395,43123,
#Partially deleted in new
chr10	119831196	119872849	chr10:119831196-119872849	1	-	119831473	119872584	0	16	404,89,165,134,166,118,124,173,101,152,145,102,42,141,86,323,	0,815,4343,5699,7338,9646,11275,12057,16416,18228,21853,26141,27687,27844,28602,41330,
#Partially deleted in new
chr10	119831200	119873621	chr10:119831200-119873621	0	-	119831200	119831200	8553170	16	400,89,165,134,166,118,124,173,101,152,123,93,42,141,86,191,	0,811,4339,5695,7334,9642,11271,12053,16412,18224,21849,26146,27683,27840,28598,42230,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	119842781	119858237	chr10:119842781-119858237	0	-	119842781	119842781	8553170	5	645,101,152,145,900,	0,4831,6643,10268,14556,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	119859049	119892556	chr10:119859049-119892556	0	-	119859049	119859049	8553170	4	132,86,194,87,	0,749,31735,33420,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr10	119892710	119944658	chr10:119892710-119944658	3	+	119892782	119933767	789624	19	235,533,211,194,90,121,90,142,209,119,153,96,192,156,103,186,163,102,4073,	0,5716,10088,11373,16330,19333,22019,23037,25125,25682,26733,28178,33325,36896,37618,39422,40294,40975,47875,
#Partially deleted in new
chr10	119892744	119898327	chr10:119892744-119898327	0	+	119892744	119892744	8553170	2	201,84,	0,5499,
#Partially deleted in new
chr10	119892782	119915807	chr10:119892782-119915807	1	+	119892782	119915807	789624	9	163,533,211,194,90,121,90,8,51,	0,5644,10016,11301,16258,19261,21947,22965,22974,
#Partially deleted in new
chr10	119902806	119904662	chr10:119902806-119904662	0	+	119902806	119904340	789624	2	203,579,	0,1277,
#Partially deleted in new
chr10	119902900	119915815	chr10:119902900-119915815	0	+	119902900	119915815	789624	5	109,194,121,90,68,	0,1183,9143,11829,12847,
#Partially deleted in new
chr10	119914499	119917925	chr10:119914499-119917925	0	+	119914499	119914499	8553170	3	320,142,90,	0,1248,3336,
#Partially deleted in new
chr10	119929644	119933770	chr10:119929644-119933770	0	+	119929644	119929644	8553170	4	118,186,163,85,	0,2488,3360,4041,
#Deleted in new
chr10	119941180	119942502	chr10:119941180-119942502	0	+	119941180	119941180	8553170	2	128,329,	0,993,
#Partially deleted in new
chr10	119958512	119958592	chr10:119958512-119958592	3	+	119958512	119958512	5263520	1	80,	0,
#Deleted in new
chr10	119997085	119997709	chr10:119997085-119997709	7	-	119997085	119997085	16724991	1	624,	0,
#Deleted in new
chr10	120069979	120070159	chr10:120069979-120070159	7	-	120069979	120069979	16724991	1	180,	0,
#Deleted in new
chr10	120354700	120355183	chr10:120354700-120355183	7	-	120354700	120354700	16724991	1	483,	0,
#Partially deleted in new
chr10	120434982	120440376	chr10:120434982-120440376	7	+	120434982	120434982	16724991	6	33,106,82,322,157,176,	0,1030,1518,4282,4693,5218,
#Partially deleted in new
chr10	120456953	120589855	chr10:120456953-120589855	3	+	120457305	120589502	789624	7	408,109,91,64,125,171,553,	0,46864,56957,61879,64017,118177,132349,
#Partially deleted in new
chr10	120457221	120589487	chr10:120457221-120589487	0	+	120457305	120589487	789624	7	140,109,91,64,125,171,185,	0,46596,56689,61611,63749,117909,132081,
#Partially deleted in new
chr10	120503578	120589851	chr10:120503578-120589851	1	+	120503578	120589502	789624	7	26,109,91,64,125,171,549,	0,239,10332,15254,17392,71552,85724,
#Partially deleted in new
chr10	120575187	120587496	chr10:120575187-120587496	0	+	120575187	120575187	8553170	2	114,238,	0,12071,
#Deleted in new
chr10	120597948	120600124	chr10:120597948-120600124	3	+	120597948	120597948	5263520	1	2176,	0,
#Deleted in new
chr10	120597948	120600108	chr10:120597948-120600108	0	+	120597948	120597948	8553170	1	2160,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	120761811	120776884	chr10:120761811-120776884	0	-	120761811	120761811	8553170	2	1864,150,	0,14923,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	120761811	120851209	chr10:120761811-120851209	3	-	120761811	120761811	8553170	4	1864,150,125,103,	0,14923,68407,89295,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	120761811	120851179	chr10:120761811-120851179	0	-	120761811	120761811	789624	3	1864,150,486,	0,14923,88882,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	120762788	120831161	chr10:120762788-120831161	1	-	120762788	120762788	8553170	4	887,150,109,943,	0,13946,45444,67430,
#Partially deleted in new
chr10	120763295	120851345	chr10:120763295-120851345	0	-	120763295	120763295	8553170	3	380,150,239,	0,13439,87811,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	120763400	120793525	chr10:120763400-120793525	1	-	120763400	120763400	8553170	5	275,150,284,199,200,	0,13334,27913,28327,29925,
#Partially deleted in new
chr10	120819306	120824994	chr10:120819306-120824994	3	+	120819306	120819306	8553170	3	522,55,230,	0,5079,5458,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	120820376	120824433	chr10:120820376-120824433	1	+	120820376	120820376	8553170	2	726,48,	0,4009,
#Partially deleted in new
chr10	120821202	120830588	chr10:120821202-120830588	0	-	120821202	120821202	8553170	2	152,370,	0,9016,
#Deleted in new
chr10	120824134	120825311	chr10:120824134-120825311	0	+	120824134	120824134	8553170	2	306,547,	0,630,
#Partially deleted in new
chr10	120851174	120909524	chr10:120851174-120909524	3	+	120851420	120908713	789624	29	332,112,154,174,187,166,115,196,104,177,85,107,76,109,125,148,107,115,172,109,63,66,178,96,166,98,146,80,969,	0,1349,7468,8934,11560,13872,14455,15394,15891,19995,22664,27178,29651,32605,34639,35514,37903,38720,39541,48854,49861,51082,51880,52872,53471,54144,54701,55601,57381,
#Partially deleted in new
chr10	120851304	120860270	chr10:120851304-120860270	0	+	120851304	120851304	8553170	4	223,112,154,162,	0,1219,7338,8804,
#Partially deleted in new
chr10	120851361	120909182	chr10:120851361-120909182	0	+	120851420	120873848	789624	22	145,80,112,85,107,76,109,125,148,107,115,172,109,63,66,178,96,166,98,146,80,627,	0,1162,19873,22477,26991,29464,32418,34452,35327,37716,38533,39354,48667,49674,50895,51693,52685,53284,53957,54514,55414,57194,
#Partially deleted in new
chr10	120851391	120862910	chr10:120851391-120862910	0	+	120851391	120851391	8553170	4	115,93,174,176,	0,7312,8717,11343,
#Partially deleted in new
chr10	120851403	120862909	chr10:120851403-120862909	0	+	120851403	120851403	8553170	4	124,112,154,175,	0,1120,7239,11331,
#Partially deleted in new
chr10	120851486	120880875	chr10:120851486-120880875	0	+	120865110	120880875	789624	14	105,112,49,154,174,187,166,115,196,104,177,85,107,50,	0,1037,4595,7156,8622,11248,13560,14143,15082,15579,19683,22352,26866,29339,
#Partially deleted in new
chr10	120851780	120858796	chr10:120851780-120858796	0	+	120851780	120851780	8553170	2	855,154,	0,6862,
#Partially deleted in new
chr10	120852615	120909520	chr10:120852615-120909520	0	+	120865110	120873848	789624	26	20,154,174,187,166,115,196,177,85,107,76,109,125,148,107,115,172,109,63,66,178,96,166,98,980,965,	0,6027,7493,10119,12431,13014,13953,18554,21223,25737,28210,31164,33198,34073,36462,37279,38100,47413,48420,49641,50439,51431,52030,52703,53260,55940,
#Deleted in new
chr10	120862449	120865191	chr10:120862449-120865191	0	+	120862449	120862449	8553170	2	472,145,	0,2597,
#Partially deleted in new
chr10	120868662	120883805	chr10:120868662-120883805	0	+	120868662	120868662	8553170	6	99,177,85,107,76,26,	0,2507,5176,9690,12163,15117,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr10	120879004	120909510	chr10:120879004-120909510	0	+	120879004	120879004	8553170	16	1558,76,109,125,148,932,109,63,66,178,96,162,98,146,80,955,	0,1821,4775,6809,7684,10073,21024,22031,23252,24050,25042,25645,26314,26871,27771,29551,
#Partially deleted in new
chr10	120885009	120889968	chr10:120885009-120889968	0	+	120885009	120885009	8553170	5	116,125,148,107,74,	0,804,1679,4068,4885,
#Partially deleted in new
chr10	120885867	120903225	chr10:120885867-120903225	0	+	120885867	120885867	8553170	8	71,148,107,115,109,63,66,171,	0,821,3210,4027,14161,15168,16389,17187,
#Deleted in new
chr10	120899837	120903175	chr10:120899837-120903175	0	+	120899837	120899837	8553170	4	300,63,66,121,	0,1198,2419,3217,
#Deleted in new
chr10	120904040	120905395	chr10:120904040-120905395	0	+	120904040	120904040	8553170	2	110,75,	0,1280,
#Deleted in new
chr10	120904064	120905656	chr10:120904064-120905656	0	+	120904064	120904064	8553170	3	78,166,338,	0,581,1254,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	120907294	120909523	chr10:120907294-120909523	0	+	120907294	120907294	8553170	1	2229,	0,
#Partially deleted in new
chr10	120925546	120980700	chr10:120925546-120980700	3	-	120925546	120925546	8553170	2	894,49,	0,55105,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	120984965	120985596	chr10:120984965-120985596	3	-	120984965	120984965	8553170	1	631,	0,
#Deleted in new
chr10	121133089	121133723	chr10:121133089-121133723	7	-	121133089	121133089	16724991	2	265,323,	0,311,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	121178699	121185966	chr10:121178699-121185966	3	+	121178699	121178699	8553170	2	273,2591,	0,4676,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	121410915	121411200	chr10:121410915-121411200	3	+	121410915	121410915	8553170	1	285,	0,
#Partially deleted in new
chr10	121478333	121596645	chr10:121478333-121596645	1	-	121479580	121593817	0	17	1337,106,138,71,123,191,111,122,152,203,145,191,124,170,78,259,169,	0,5364,7061,9020,9657,18198,20161,22492,25456,36783,38985,41645,60258,72956,86168,115375,118143,
#Partially deleted in new
chr10	121478333	121593967	chr10:121478333-121593967	1	-	121479856	121593817	0	15	1688,106,138,71,123,191,111,122,152,203,124,170,78,267,259,	0,5364,7061,9020,9657,18198,20161,22492,25456,36783,60258,72956,86168,87104,115375,
#Partially deleted in new
chr10	121478333	121598458	chr10:121478333-121598458	1	-	121479856	121593817	789624	17	1688,106,138,71,123,191,111,122,152,203,145,191,124,170,78,259,497,	0,5364,7061,9020,9657,18198,20161,22492,25456,36783,38985,41645,60258,72956,86168,115375,119628,
#Partially deleted in new
chr10	121478340	121598084	chr10:121478340-121598084	1	-	121479856	121593817	0	18	1681,106,138,71,123,191,111,122,152,203,145,191,124,170,78,267,259,123,	0,5357,7054,9013,9650,18191,20154,22485,25449,36776,38978,41638,60251,72949,86161,87097,115368,119621,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr10	121478363	121531314	chr10:121478363-121531314	1	-	121479856	121526752	789624	17	1658,106,138,71,123,191,111,122,152,203,145,191,40,226,328,137,48,	0,5334,7031,8990,9627,18168,20131,22462,25426,36753,38955,41615,47791,48365,49312,51958,52903,
#Partially deleted in new
chr10	121478573	121485484	chr10:121478573-121485484	0	-	121480050	121485484	789624	3	1540,106,90,	0,5124,6821,
#Partially deleted in new
chr10	121479071	121598458	chr10:121479071-121598458	1	-	121479856	121593817	0	16	950,106,138,71,123,191,111,122,152,197,145,191,124,170,259,497,	0,4626,6323,8282,8919,17460,19423,21754,24718,36051,38247,40907,59520,72218,114637,118890,
#Partially deleted in new
chr10	121479217	121598298	chr10:121479217-121598298	1	-	121479856	121593817	0	16	804,106,138,71,123,191,111,122,152,191,124,170,78,267,259,337,	0,4480,6177,8136,8773,17314,19277,21608,24572,40761,59374,72072,85284,86220,114491,118744,
#Partially deleted in new
chr10	121479226	121598413	chr10:121479226-121598413	0	-	121517449	121593817	789624	17	795,106,138,71,123,191,111,122,152,203,145,148,191,124,170,259,452,	0,4471,6168,8127,8764,17305,19268,21599,24563,35890,38092,39455,40752,59365,72063,114482,118735,
#Partially deleted in new
chr10	121479618	121598452	chr10:121479618-121598452	1	-	121479856	121593817	789624	16	403,106,138,71,123,191,111,122,152,203,148,191,124,170,259,491,	0,4079,5776,7735,8372,16913,18876,21207,24171,35498,39063,40360,58973,71671,114090,118343,
#Deleted in new
chr10	121479784	121480485	chr10:121479784-121480485	0	-	121479784	121479784	8553170	2	237,260,	0,441,
#Partially deleted in new
chr10	121479854	121515179	chr10:121479854-121515179	0	-	121479876	121515179	789624	9	167,138,71,123,191,111,122,152,63,	0,5540,7499,8136,16677,18640,20971,23935,35262,
#Partially deleted in new
chr10	121479856	121593829	chr10:121479856-121593829	1	-	121479856	121593817	0	17	165,106,138,71,123,191,111,122,152,197,145,191,124,170,78,267,121,	0,3841,5538,7497,8134,16675,18638,20969,23933,35266,37462,40122,58735,71433,84645,85581,113852,
#Partially deleted in new
chr10	121479856	121593829	chr10:121479856-121593829	1	-	121479856	121593817	789624	18	165,106,138,71,123,191,111,122,152,197,145,6,191,124,170,78,267,121,	0,3841,5538,7497,8134,16675,18638,20969,23933,35266,37462,37610,40122,58735,71433,84645,85581,113852,
#Partially deleted in new
chr10	121479856	121598403	chr10:121479856-121598403	3	-	121479856	121593817	0	18	165,106,138,71,123,191,111,122,152,203,148,191,124,170,78,267,259,442,	0,3841,5538,7497,8134,16675,18638,20969,23933,35260,38825,40122,58735,71433,84645,85581,113852,118105,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr10	121481834	121598432	chr10:121481834-121598432	1	-	121482171	121593817	0	17	343,106,138,71,123,191,111,122,152,203,148,191,124,170,78,259,471,	0,1863,3560,5519,6156,14697,16660,18991,21955,33282,36847,38144,56757,69455,82667,111874,116127,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr10	121481855	121593841	chr10:121481855-121593841	1	-	121482171	121593817	0	17	322,106,138,71,123,191,111,122,152,203,148,191,124,170,78,267,133,	0,1842,3539,5498,6135,14676,16639,18970,21934,33261,36826,38123,56736,69434,82646,83582,111853,
#Partially deleted in new
chr10	121483697	121598234	chr10:121483697-121598234	0	-	121483697	121593817	0	17	106,138,71,123,191,111,122,152,203,148,191,124,170,78,267,259,273,	0,1697,3656,4293,12834,14797,17128,20092,31419,34984,36281,54894,67592,80804,81740,110011,114264,
#Partially deleted in new
chr10	121483717	121598396	chr10:121483717-121598396	0	-	121483717	121593817	789624	16	86,138,71,123,191,111,122,152,197,145,191,124,170,78,259,435,	0,1677,3636,4273,12814,14777,17108,20072,31405,33601,36261,54874,67572,80784,109991,114244,
#Deleted in new
chr10	121515226	121518829	chr10:121515226-121518829	0	-	121515226	121515226	8553170	3	93,145,148,	0,2092,3455,
#Partially deleted in new
chr10	121517333	121598072	chr10:121517333-121598072	0	-	121517333	121517333	8553170	9	130,148,191,124,170,78,267,259,111,	0,1348,2645,21258,33956,47168,48104,76375,80628,
#Partially deleted in new
chr10	121537965	121598298	chr10:121537965-121598298	1	-	121538393	121593817	0	7	445,124,170,78,267,259,337,	0,626,13324,26536,27472,55743,59996,
#Deleted in new
chr10	121564323	121565911	chr10:121564323-121565911	0	-	121564323	121564323	8553170	2	256,474,	0,1114,
#Partially deleted in new
chr10	121564323	121593887	chr10:121564323-121593887	1	-	121564493	121593817	789624	2	256,179,	0,29385,
#Partially deleted in new
chr10	121564323	121593764	chr10:121564323-121593764	0	-	121564493	121593764	789624	3	256,267,56,	0,1114,29385,
#Partially deleted in new
chr10	121564324	121597966	chr10:121564324-121597966	0	-	121564324	121593817	789624	4	255,68,259,5,	0,1312,29384,33637,
#Partially deleted in new
chr10	121583301	121594153	chr10:121583301-121594153	0	-	121583301	121583301	8553170	3	273,259,42,	0,10407,10810,
#Deleted in new
chr10	121615424	121615839	chr10:121615424-121615839	3	-	121615424	121615424	8553170	2	241,69,	0,346,
#Deleted in new
chr10	121713606	121713994	chr10:121713606-121713994	7	+	121713606	121713606	16724991	1	388,	0,
#Partially deleted in new
chr10	121736302	121739730	chr10:121736302-121739730	3	+	121736302	121736302	8553170	3	104,112,83,	0,488,3345,
#Partially deleted in new
chr10	121740420	121928063	chr10:121740420-121928063	1	-	121743679	121927949	789624	12	3438,121,100,182,33,129,230,246,104,63,64,220,	0,49748,96297,100661,129585,159445,161970,170485,173369,181928,183845,187423,
#Partially deleted in new
chr10	121740420	121928063	chr10:121740420-121928063	1	-	121743679	121913838	789624	10	3438,121,100,182,33,129,230,246,104,220,	0,49748,96297,100661,129585,158420,161970,170485,173369,187423,
#Partially deleted in new
chr10	121740420	121928801	chr10:121740420-121928801	1	-	121743679	121928431	789624	12	3438,121,100,182,33,129,230,246,104,63,64,455,	0,49748,96297,100661,129585,158420,161970,170485,173369,181928,183845,187926,
#Partially deleted in new
chr10	121740420	121928063	chr10:121740420-121928063	3	-	121743679	121911143	789624	11	3438,121,100,182,33,129,230,246,63,64,220,	0,49748,96297,100661,129585,159445,161970,170485,181928,183845,187423,
#Partially deleted in new
chr10	121740423	121928036	chr10:121740423-121928036	1	-	121743679	121927949	789624	12	3435,121,100,182,33,129,230,246,104,63,64,193,	0,49745,96294,100658,129582,158417,161967,170482,173366,181925,183842,187420,
#Partially deleted in new
chr10	121743194	121927938	chr10:121743194-121927938	0	-	121743679	121927938	789624	12	664,121,100,182,33,129,230,246,104,63,64,95,	0,46974,93523,97887,126811,156671,159196,167711,170595,179154,181071,184649,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	121782493	121790226	chr10:121782493-121790226	0	-	121782493	121782493	8553170	2	206,58,	0,7675,
#Partially deleted in new
chr10	121841118	121902538	chr10:121841118-121902538	0	-	121841118	121841118	8553170	3	145,33,148,	0,28887,61272,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	121846599	121846700	chr10:121846599-121846700	3	+	121846599	121846599	8553170	1	101,	0,
#Partially deleted in new
chr10	121902516	121928462	chr10:121902516-121928462	0	-	121902516	121928431	789624	6	104,246,104,63,64,116,	0,8389,11273,19832,21749,25830,
#Partially deleted in new
chr10	121928311	121951965	chr10:121928311-121951965	7	+	121928311	121928311	16724991	2	323,628,	0,23026,
#Partially deleted in new
chr10	121948187	121951622	chr10:121948187-121951622	5	+	121948187	121948187	16724991	3	43,76,387,	0,1224,3048,
#Deleted in new
chr10	121949411	121949487	chr10:121949411-121949487	3	-	121949411	121949411	8553170	1	76,	0,
#Deleted in new
chr10	121956781	121957098	chr10:121956781-121957098	3	+	121956781	121956781	8553170	1	317,	0,
#Partially deleted in new
chr10	121957087	121975217	chr10:121957087-121975217	3	-	121959335	121975165	789624	11	172,87,95,49,95,91,100,152,131,78,344,	0,2236,2413,3270,4335,6150,8198,10567,13851,16916,17786,
#Partially deleted in new
chr10	121957090	121959785	chr10:121957090-121959785	0	-	121957090	121957090	8553170	3	169,87,285,	0,2233,2410,
#Partially deleted in new
chr10	121957090	121959797	chr10:121957090-121959797	0	-	121957090	121957090	8553170	2	169,474,	0,2233,
#Partially deleted in new
chr10	121959364	121974285	chr10:121959364-121974285	0	-	121959364	121959364	8553170	9	46,95,49,95,91,100,152,131,282,	0,136,993,2058,3873,5921,8290,11574,14639,
#Partially deleted in new
chr10	121959917	121965304	chr10:121959917-121965304	0	-	121959917	121959917	8553170	4	489,95,91,19,	0,1505,3320,5368,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	121961756	121975194	chr10:121961756-121975194	1	-	121962000	121975165	789624	7	351,91,100,152,131,78,321,	0,1481,3529,5898,9182,12247,13117,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	121965342	121974807	chr10:121965342-121974807	0	-	121965342	121965342	8553170	5	43,152,131,78,418,	0,2312,5596,8661,9047,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	121965763	121967700	chr10:121965763-121967700	3	+	121965763	121965763	8553170	1	1937,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	121967377	121974788	chr10:121967377-121974788	0	-	121967377	121967377	8553170	3	429,131,785,	0,3561,6626,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	121967645	121974754	chr10:121967645-121974754	0	-	121967645	121967645	8553170	4	161,131,78,449,	0,3293,6358,6660,
#Partially deleted in new
chr10	121967692	121975122	chr10:121967692-121975122	0	-	121967692	121967692	8553170	3	114,77,249,	0,3246,7181,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	121989173	122052697	chr10:121989173-122052697	0	+	121989173	121989173	8553170	3	315,78,2260,	0,32763,61264,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr10	121989193	122254542	chr10:121989193-122254542	3	+	122021981	122254056	789624	23	295,78,113,5313,114,126,135,137,1312,61,202,62,116,172,141,90,144,77,44,161,107,121,552,	0,32743,61244,93453,99284,143415,154378,205846,221203,226197,227433,235532,237172,238643,240152,241157,248201,248767,252764,259449,259856,260350,264797,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr10	121989193	122254545	chr10:121989193-122254545	1	+	122021981	122254056	789624	20	295,78,113,126,137,1312,61,202,62,116,172,141,90,144,77,44,161,107,121,555,	0,32743,61244,143415,205846,221203,226197,227433,235532,237172,238643,240152,241157,248201,248767,252764,259449,259856,260350,264797,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr10	121989205	122254345	chr10:121989205-122254345	1	+	122021981	122254056	789624	20	283,78,113,5313,261,126,137,1312,61,202,62,116,172,144,77,44,161,107,121,355,	0,32731,61232,93441,99272,143403,205834,221191,226185,227421,235520,237160,238631,248189,248755,252752,259437,259844,260338,264785,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr10	121989205	122254348	chr10:121989205-122254348	1	+	122021981	122254056	789624	20	283,78,113,5313,114,126,137,1312,61,202,62,116,172,144,77,44,161,107,121,358,	0,32731,61232,93441,99272,143403,205834,221191,226185,227421,235520,237160,238631,248189,248755,252752,259437,259844,260338,264785,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	121989262	122079145	chr10:121989262-122079145	0	+	121989262	121989262	8553170	4	226,78,113,169,	0,32674,61175,89714,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	121994631	122023790	chr10:121994631-122023790	0	+	121994631	121994631	8553170	2	79,1854,	0,27305,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	122017981	122019160	chr10:122017981-122019160	3	-	122017981	122017981	8553170	2	303,514,	0,665,
#Partially deleted in new
chr10	122019747	122022231	chr10:122019747-122022231	0	+	122019747	122019747	8553170	2	134,295,	0,2189,
#Partially deleted in new
chr10	122021935	122254540	chr10:122021935-122254540	1	+	122021981	122254056	789624	22	79,113,5313,114,126,135,137,1312,61,202,62,116,172,141,90,144,77,44,161,107,121,550,	0,28502,60711,66542,110673,121636,173104,188461,193455,194691,202790,204430,205901,207410,208415,215459,216025,220022,226707,227114,227608,232055,
#Partially deleted in new
chr10	122021935	122254540	chr10:122021935-122254540	1	+	122021981	122254056	789624	19	79,113,126,137,1312,61,202,62,116,172,141,90,144,77,44,161,107,121,550,	0,28502,110673,173104,188461,193455,194691,202790,204430,205901,207410,208415,215459,216025,220022,226707,227114,227608,232055,
#Partially deleted in new
chr10	122021935	122254540	chr10:122021935-122254540	1	+	122021981	122254056	789624	19	79,113,5313,261,126,137,1312,61,202,62,116,172,144,77,44,161,107,121,550,	0,28502,60711,66542,110673,173104,188461,193455,194691,202790,204430,205901,215459,216025,220022,226707,227114,227608,232055,
#Partially deleted in new
chr10	122021992	122083007	chr10:122021992-122083007	0	+	122021992	122083007	789624	4	22,60,113,352,	0,11101,28445,60663,
#Partially deleted in new
chr10	122113029	122210569	chr10:122113029-122210569	0	+	122113029	122113029	8553170	4	200,135,137,173,	0,30542,82010,97367,
#Partially deleted in new
chr10	122113055	122210523	chr10:122113055-122210523	0	+	122113055	122113055	8553170	3	174,137,127,	0,81984,97341,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr10	122126713	122254544	chr10:122126713-122254544	1	+	122211313	122254056	789624	16	429,126,137,1312,49,202,62,116,172,144,77,44,161,107,121,554,	0,5895,68326,83683,88689,89913,98012,99652,101123,110681,111247,115244,121929,122336,122830,127277,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	122145105	122155176	chr10:122145105-122155176	3	-	122145105	122145105	8553170	4	1902,141,295,345,	0,5927,7414,9726,
#Partially deleted in new
chr10	122163425	122254545	chr10:122163425-122254545	1	+	122163924	122254056	789624	16	567,137,1312,61,202,62,116,172,141,144,77,44,161,107,121,555,	0,31614,46971,51965,53201,61300,62940,64411,65920,73969,74535,78532,85217,85624,86118,90565,
#Partially deleted in new
chr10	122163589	122254483	chr10:122163589-122254483	1	+	122163924	122254056	789624	18	403,137,1312,36,61,202,62,116,172,141,90,144,77,44,161,107,121,493,	0,31450,46807,49752,51801,53037,61136,62776,64247,65756,66761,73805,74371,78368,85053,85460,85954,90401,
#Partially deleted in new
chr10	122163773	122254545	chr10:122163773-122254545	1	+	122163924	122254056	789624	17	219,137,1312,36,61,202,62,116,172,141,144,77,44,161,107,121,555,	0,31266,46623,49568,51617,52853,60952,62592,64063,65572,73621,74187,78184,84869,85276,85770,90217,
#Partially deleted in new
chr10	122163843	122254538	chr10:122163843-122254538	1	+	122163924	122254056	789624	17	149,137,1312,61,202,62,116,172,141,90,144,77,44,161,107,121,548,	0,31196,46553,51547,52783,60882,62522,63993,65502,66507,73551,74117,78114,84799,85206,85700,90147,
#Partially deleted in new
chr10	122192447	122226480	chr10:122192447-122226480	0	+	122192678	122226480	789624	7	350,137,1312,61,202,62,115,	0,2592,17949,22943,24179,32278,33918,
#Partially deleted in new
chr10	122210041	122254337	chr10:122210041-122254337	0	+	122210041	122210041	8553170	13	1667,61,202,62,116,172,144,77,44,161,107,121,347,	0,5349,6585,14684,16324,17795,27353,27919,31916,38601,39008,39502,43949,
#Partially deleted in new
chr10	122210885	122227906	chr10:122210885-122227906	0	+	122210885	122215407	789624	6	537,61,202,62,116,70,	0,4505,5741,13840,15480,16951,
#Deleted in new
chr10	122210902	122216665	chr10:122210902-122216665	0	+	122210902	122216665	789624	4	255,212,61,39,	0,594,4488,5724,
#Partially deleted in new
chr10	122211208	122237522	chr10:122211208-122237522	0	+	122211208	122237522	789624	7	500,49,202,62,116,172,128,	0,4194,5418,13517,15157,16628,26186,
#Partially deleted in new
chr10	122211685	122226421	chr10:122211685-122226421	0	+	122211685	122226421	789624	5	23,61,295,62,56,	0,3705,4941,13040,14680,
#Partially deleted in new
chr10	122237958	122254538	chr10:122237958-122254538	0	+	122237958	122254258	789624	5	79,44,161,45,412,	0,3999,10684,11091,16168,
#Partially deleted in new
chr10	122238018	122254493	chr10:122238018-122254493	0	+	122238018	122254056	789624	7	19,44,9,161,107,121,503,	0,3939,7046,10624,11031,11525,15972,
#Partially deleted in new
chr10	122241633	122249128	chr10:122241633-122249128	0	+	122241633	122241633	8553170	3	368,161,79,	0,7009,7416,
#Partially deleted in new
chr10	122246472	122254540	chr10:122246472-122254540	0	+	122246472	122246472	8553170	4	2331,107,121,550,	0,2577,3071,7518,
#Partially deleted in new
chr10	122271305	122338162	chr10:122271305-122338162	3	+	122275081	122338085	789624	16	209,60,149,74,144,90,115,70,131,120,92,83,78,99,189,146,	0,3734,5485,12545,14799,18603,19774,26462,27698,35883,58174,59870,61130,63575,65188,66711,
#Deleted in new
chr10	122291080	122291690	chr10:122291080-122291690	0	+	122291080	122291080	8553170	2	114,265,	0,345,
#Partially deleted in new
chr10	122331966	122336622	chr10:122331966-122336622	0	+	122331966	122331966	8553170	4	292,78,99,129,	0,469,2914,4527,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	122345689	122345793	chr10:122345689-122345793	3	+	122345689	122345689	8553170	1	104,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	122374695	122442602	chr10:122374695-122442602	3	+	122393200	122429938	0	12	111,161,57,46,98,126,144,69,65,64,90,12979,	0,18485,23222,25647,31880,38224,41163,43204,49503,50200,52246,54928,
#Partially deleted in new
chr10	122374695	122416006	chr10:122374695-122416006	0	+	122374695	122374695	8553170	5	111,161,57,126,148,	0,18485,23222,38224,41163,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	122374759	122432345	chr10:122374759-122432345	1	+	122393200	122429834	789624	13	88,161,57,46,98,126,144,69,65,64,90,41,2722,	0,18421,23158,25583,31816,38160,41099,43140,49439,50136,52182,53516,54864,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	122374833	122412976	chr10:122374833-122412976	0	+	122393200	122412976	789624	7	128,70,161,57,46,98,57,	0,17469,18347,23084,25509,31742,38086,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	122386608	122430479	chr10:122386608-122430479	1	+	122393200	122429938	0	13	1375,70,161,57,46,98,126,144,69,65,64,90,856,	0,5694,6572,11309,13734,19967,26311,29250,31291,37590,38287,40333,43015,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	122393104	122432354	chr10:122393104-122432354	1	+	122393200	122428380	0	12	237,57,46,98,126,144,69,65,64,90,145,2731,	0,4813,7238,13471,19815,22754,24795,31094,31791,33837,35171,36519,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	122393127	122432354	chr10:122393127-122432354	1	+	122393200	122429938	0	11	214,57,46,98,126,144,69,65,64,90,2731,	0,4790,7215,13448,19792,22731,24772,31071,31768,33814,36496,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	122411770	122425731	chr10:122411770-122425731	0	+	122411770	122411770	8553170	4	1275,144,6364,836,	0,4088,6129,13125,
#Deleted in new
chr10	122416964	122417067	chr10:122416964-122417067	3	+	122416964	122416964	5263520	1	103,	0,
#Partially deleted in new
chr10	122435923	122461383	chr10:122435923-122461383	3	-	122435923	122435923	8553170	3	709,1417,435,	0,22571,25025,
#Partially deleted in new
chr10	122450525	122458676	chr10:122450525-122458676	0	-	122450525	122450525	8553170	2	384,182,	0,7969,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	122454652	122457352	chr10:122454652-122457352	3	+	122454727	122456933	789624	2	372,446,	0,2254,
#Partially deleted in new
chr10	122458550	122514894	chr10:122458550-122514894	1	+	122458555	122514359	8553170	9	159,100,205,195,33,115,58,96,704,	0,30351,30871,48140,48819,50105,51545,53419,55640,
#Partially deleted in new
chr10	122461524	122514908	chr10:122461524-122514908	3	+	122461652	122514359	0	9	600,100,205,195,33,115,58,96,718,	0,27377,27897,45166,45845,47131,48571,50445,52666,
#Partially deleted in new
chr10	122506690	122514907	chr10:122506690-122514907	0	+	122506690	122514359	789624	6	195,33,115,58,96,717,	0,679,1965,3405,5279,7500,
#Partially deleted in new
chr10	122560664	122643736	chr10:122560664-122643736	1	+	122560770	122643398	789624	40	167,30,48,48,48,48,324,30,42,324,30,33,324,30,39,324,30,33,324,30,33,324,30,33,324,30,39,324,27,33,154,203,321,21,30,151,209,185,410,615,	0,5302,9497,10225,11649,13050,15734,17146,18053,18913,20201,33831,34638,36360,37309,38109,39399,40326,41132,50553,52503,53309,54612,56563,57352,58643,59588,60392,64612,65268,69175,69623,70296,71190,72196,72526,75326,76463,79375,82457,
#Partially deleted in new
chr10	122560664	122643736	chr10:122560664-122643736	1	+	122560770	122643398	789624	56	167,30,48,48,48,48,324,30,42,324,30,33,324,30,39,324,324,30,39,324,30,33,324,30,39,324,30,33,324,30,33,324,30,33,324,30,33,324,30,33,324,30,39,324,27,33,154,203,321,21,30,151,209,185,410,615,	0,5302,9497,10225,11649,13050,15734,17146,18053,18913,20201,21128,21935,23657,24606,25395,28279,30000,30814,31607,32904,33831,34638,36360,37309,38109,39399,40326,41132,42435,44385,45191,46494,48444,49250,50553,52503,53309,54612,56563,57352,58643,59588,60392,64612,65268,69175,69623,70296,71190,72196,72526,75326,76463,79375,82457,
#Partially deleted in new
chr10	122560664	122643736	chr10:122560664-122643736	1	+	122560770	122643398	789624	52	167,30,48,48,48,48,324,30,42,324,30,33,324,39,324,324,30,39,324,30,33,324,30,39,324,30,33,324,30,33,324,30,33,324,30,33,324,30,39,324,27,33,154,203,321,21,30,151,209,185,410,615,	0,5302,9497,10225,11649,13050,15734,17146,18053,18913,20201,21128,21935,24606,25395,28279,30000,30814,31607,32904,33831,34638,36360,37309,38109,39399,40326,41132,46494,48444,49250,50553,52503,53309,54612,56563,57352,58643,59588,60392,64612,65268,69175,69623,70296,71190,72196,72526,75326,76463,79375,82457,
#Partially deleted in new
chr10	122560664	122643736	chr10:122560664-122643736	3	+	122560770	122643398	789624	53	167,30,48,48,48,48,324,30,42,324,30,33,324,30,39,324,324,30,39,324,30,33,324,30,39,324,30,33,324,30,33,324,30,33,324,30,33,324,30,39,324,27,33,154,203,321,21,30,151,209,185,410,615,	0,5302,9497,10225,11649,13050,15734,17146,18053,18913,20201,21128,21935,23657,24606,25395,28279,30000,30814,31607,32904,33831,34638,36360,37309,38109,39399,40326,41132,42435,44385,45191,46494,48444,49250,50553,56563,57352,58643,59588,60392,64612,65268,69175,69623,70296,71190,72196,72526,75326,76463,79375,82457,
#Partially deleted in new
chr10	122560664	122643736	chr10:122560664-122643736	1	+	122560770	122643398	789624	52	167,30,48,48,48,48,324,30,42,324,30,33,324,39,324,324,30,39,324,30,33,324,30,39,324,30,33,324,30,33,324,30,33,324,30,33,324,30,39,324,27,33,154,203,321,21,30,151,209,185,410,615,	0,5302,9497,10225,11649,13050,15734,17146,18053,18913,20201,21128,21935,24606,25395,28279,30000,30814,31607,32904,33831,34638,36360,37309,38109,39399,40326,41132,42435,44385,45191,46494,48444,49250,50553,56563,57352,58643,59588,60392,64612,65268,69175,69623,70296,71190,72196,72526,75326,76463,79375,82457,
#Partially deleted in new
chr10	122560664	122643736	chr10:122560664-122643736	1	+	122560770	122643398	789624	40	167,30,48,48,48,48,324,30,42,324,30,33,324,30,39,324,30,33,324,30,33,324,30,33,324,30,39,324,27,33,154,203,321,21,30,151,209,185,410,615,	0,5302,9497,10225,11649,13050,15734,17146,18053,18913,20201,21128,21935,23657,37309,38109,39399,40326,41132,42435,44385,45191,46494,56563,57352,58643,59588,60392,64612,65268,69175,69623,70296,71190,72196,72526,75326,76463,79375,82457,
#Partially deleted in new
chr10	122560664	122643736	chr10:122560664-122643736	1	+	122560770	122643398	789624	53	167,30,48,48,48,48,324,30,42,324,30,33,324,30,39,324,324,30,39,324,30,33,324,30,39,324,30,33,324,30,33,324,30,33,324,30,33,324,30,39,324,27,33,154,203,321,21,30,151,209,185,410,615,	0,5302,9497,10225,11649,13050,15734,17146,18053,18913,20201,21128,21935,23657,24606,25395,28279,30000,30814,31607,32904,33831,34638,36360,37309,38109,39399,40326,41132,42435,48444,49250,50553,52503,53309,54612,56563,57352,58643,59588,60392,64612,65268,69175,69623,70296,71190,72196,72526,75326,76463,79375,82457,
#Partially deleted in new
chr10	122697708	122699822	chr10:122697708-122699822	3	-	122697732	122699790	789624	3	780,76,208,	0,1628,1906,
#Partially deleted in new
chr10	122697708	122699768	chr10:122697708-122699768	0	-	122697857	122699768	789624	4	167,231,76,154,	0,549,1628,1906,
#Partially deleted in new
chr10	122729428	122826448	chr10:122729428-122826448	7	+	122729428	122729428	16724991	24	315,315,323,318,319,295,148,191,316,318,33,33,154,218,318,154,218,312,330,312,33,176,383,292,	0,4917,20470,27277,34917,38657,42669,45321,48306,50629,51428,53534,54889,56532,58776,62858,65840,69379,72907,89179,90934,91489,94015,96728,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr10	122756693	122797645	chr10:122756693-122797645	4	+	122756693	122756693	16724991	28	330,72,98,69,69,30,48,30,72,148,191,30,42,316,30,318,33,33,154,370,218,42,30,154,217,218,105,276,	0,467,703,4731,5066,8090,9629,12632,14349,15404,18056,19441,20120,21041,22592,23364,24163,26269,27624,28342,29267,32217,35056,35593,37837,38575,39952,40676,
#Partially deleted in new
chr10	122796690	122799180	chr10:122796690-122799180	4	+	122796690	122796690	16724991	3	60,39,373,	0,1221,2117,
#Partially deleted in new
chr10	122818815	122826868	chr10:122818815-122826868	5	+	122818815	122818815	16724991	5	104,188,176,383,712,	0,1547,2102,4628,7341,
#Partially deleted in new
chr10	122832148	122850793	chr10:122832148-122850793	3	-	122832277	122845843	789624	11	302,269,392,173,218,151,215,151,459,203,370,	0,1523,2557,4029,4682,5255,6868,9029,13613,17088,18275,
#Partially deleted in new
chr10	122832154	122846175	chr10:122832154-122846175	1	-	122832277	122845843	789624	9	296,269,392,173,218,151,215,151,414,	0,1517,2551,4023,4676,5249,6862,9023,13607,
#Partially deleted in new
chr10	122832157	122846175	chr10:122832157-122846175	0	-	122835035	122845843	789624	4	293,269,392,414,	0,1514,2548,13604,
#Partially deleted in new
chr10	122832157	122838098	chr10:122832157-122838098	0	-	122832157	122832157	8553170	6	293,269,392,173,235,695,	0,1514,2548,4020,4673,5246,
#Partially deleted in new
chr10	122832157	122846175	chr10:122832157-122846175	0	-	122839154	122845843	789624	8	293,269,392,173,69,151,215,414,	0,1514,2548,4020,4673,5246,6859,13604,
#Partially deleted in new
chr10	122832157	122846175	chr10:122832157-122846175	0	-	122839154	122845843	789624	8	293,269,392,173,218,151,215,414,	0,1514,2548,4020,4673,5246,6859,13604,
#Partially deleted in new
chr10	122849077	122879598	chr10:122849077-122879598	3	-	122849246	122850515	789624	4	362,127,142,114,	0,1346,6567,30407,
#Partially deleted in new
chr10	122849093	122879641	chr10:122849093-122879641	0	-	122849093	122849093	789624	3	346,142,157,	0,6551,30391,
#Partially deleted in new
chr10	122849095	122879605	chr10:122849095-122879605	1	-	122849246	122850515	789624	4	344,97,142,121,	0,1328,6549,30389,
#Partially deleted in new
chr10	122855255	122879581	chr10:122855255-122879581	0	-	122855255	122855255	8553170	2	531,97,	0,24229,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	122879680	122898615	chr10:122879680-122898615	7	+	122879680	122879680	16724991	6	80,86,70,136,455,823,	0,990,1917,5036,8588,18112,
#Partially deleted in new
chr10	122879850	122898024	chr10:122879850-122898024	5	+	122879850	122879850	16724991	6	161,203,70,207,455,232,	0,820,1747,3874,8418,17942,
#Partially deleted in new
chr10	122910700	122913111	chr10:122910700-122913111	3	+	122911634	122912954	789624	3	119,127,350,	0,932,2061,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	122930902	122954311	chr10:122930902-122954311	0	-	122930902	122930902	8553170	6	1759,455,207,73,200,297,	0,6802,17746,21051,21926,23112,
#Partially deleted in new
chr10	122931507	122954403	chr10:122931507-122954403	3	-	122932426	122954178	789624	6	1154,455,207,73,204,389,	0,6197,17141,20446,21321,22507,
#Partially deleted in new
chr10	122932602	122952007	chr10:122932602-122952007	0	-	122932602	122932602	8553170	4	59,455,107,54,	0,5102,16046,19351,
#Partially deleted in new
chr10	122954380	122990390	chr10:122954380-122990390	0	+	122954380	122954380	8553170	5	188,243,76,94,217,	0,28891,31919,32488,35793,
#Partially deleted in new
chr10	122980039	122990390	chr10:122980039-122990390	3	+	122980479	122987503	789624	7	656,292,199,76,94,171,217,	0,2693,3232,6260,6829,7294,10134,
#Partially deleted in new
chr10	122980477	122990392	chr10:122980477-122990392	1	+	122980479	122990373	789624	6	218,292,199,76,94,219,	0,2255,2794,5822,6391,9696,
#Partially deleted in new
chr10	122980479	122987503	chr10:122980479-122987503	1	+	122980479	122987503	789624	6	216,292,199,76,94,170,	0,2253,2792,5820,6389,6854,
#Partially deleted in new
chr10	122980530	122990335	chr10:122980530-122990335	0	+	122980530	122980530	8553170	5	165,199,76,94,162,	0,2741,5769,6338,9643,
#Partially deleted in new
chr10	122981983	122997513	chr10:122981983-122997513	0	+	122981983	122981983	8553170	7	1041,199,76,94,171,234,395,	0,1288,4316,4885,5350,8190,15135,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	122982462	122986247	chr10:122982462-122986247	0	+	122982462	122982462	8553170	2	562,2976,	0,809,
#Partially deleted in new
chr10	122982916	122990392	chr10:122982916-122990392	0	+	122982916	122982916	8553170	4	108,199,76,219,	0,355,3383,7257,
#Partially deleted in new
chr10	122983289	122994929	chr10:122983289-122994929	0	+	122983289	122983289	8553170	5	181,76,94,234,287,	0,3010,3579,6884,11353,
#Partially deleted in new
chr10	122990805	123008817	chr10:122990805-123008817	3	-	122993779	122998625	789624	5	3918,183,179,151,124,	0,5188,7687,16220,17888,
#Partially deleted in new
chr10	122990807	123008687	chr10:122990807-123008687	1	-	122993779	122998625	789624	5	3916,183,179,151,113,	0,5186,7685,16218,17767,
#Partially deleted in new
chr10	122995993	123008807	chr10:122995993-123008807	0	-	122995993	122995993	8553170	4	183,166,151,114,	0,2499,11032,12700,
#Partially deleted in new
chr10	122996146	123008773	chr10:122996146-123008773	0	-	122996146	122996146	8553170	3	30,179,80,	0,2346,12547,
#Partially deleted in new
chr10	122998226	123008812	chr10:122998226-123008812	0	-	122998226	122998226	8553170	3	445,151,119,	0,8799,10467,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	123008978	123054119	chr10:123008978-123054119	1	+	123040468	123053765	0	10	89,160,207,171,126,93,90,138,100,425,	0,25377,31487,32230,34067,35414,38230,42070,44082,44716,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	123009015	123058311	chr10:123009015-123058311	3	+	123009029	123053765	0	11	56,160,101,207,171,126,93,90,138,100,4617,	0,25340,28731,31450,32193,34030,35377,38193,42033,44045,44679,
#Deleted in new
chr10	123052760	123053878	chr10:123052760-123053878	0	+	123052760	123052760	8553170	2	400,184,	0,934,
#Deleted in new
chr10	123135961	123137741	chr10:123135961-123137741	3	+	123136050	123137731	789624	2	489,684,	0,1096,
#Deleted in new
chr10	123148121	123150672	chr10:123148121-123150672	3	+	123148378	123150123	789624	2	525,1103,	0,1448,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	123154276	123170467	chr10:123154276-123170467	3	+	123154917	123163835	789624	8	209,195,70,152,159,178,217,6648,	0,641,1381,3452,6130,7959,8335,9543,
#Partially deleted in new
chr10	123154401	123165212	chr10:123154401-123165212	1	+	123154917	123165067	789624	5	84,195,70,152,166,	0,516,1256,3327,10645,
#Partially deleted in new
chr10	123154414	123165365	chr10:123154414-123165365	1	+	123154917	123165056	789624	8	71,195,70,152,159,178,217,319,	0,503,1243,3314,5992,7821,8197,10632,
#Partially deleted in new
chr10	123154858	123162693	chr10:123154858-123162693	0	+	123154917	123162693	789624	6	254,70,152,159,178,82,	0,799,2870,5548,7377,7753,
#Deleted in new
chr10	123162253	123163241	chr10:123162253-123163241	0	+	123162253	123162253	8553170	2	160,630,	0,358,
#Deleted in new
chr10	123171534	123171875	chr10:123171534-123171875	7	-	123171534	123171534	16724991	1	341,	0,
#Deleted in new
chr10	123323421	123323586	chr10:123323421-123323586	7	-	123323421	123323421	16724991	1	165,	0,
#Partially deleted in new
chr10	123356449	123517708	chr10:123356449-123517708	3	+	123356449	123356449	8553170	5	95,232,259,160,85,	0,4869,5439,92903,161174,
#Deleted in new
chr10	123425712	123427640	chr10:123425712-123427640	3	-	123425712	123425712	8553170	2	282,134,	0,1794,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	123449352	123489336	chr10:123449352-123489336	1	+	123449352	123449352	8553170	2	160,414,	0,39570,
#Partially deleted in new
chr10	123574226	123583767	chr10:123574226-123583767	3	+	123574226	123574226	8553170	3	152,146,140,	0,7717,9401,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	123666354	123694607	chr10:123666354-123694607	3	+	123666407	123688160	789624	3	721,114,6679,	0,8463,21574,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr10	123713275	123891984	chr10:123713275-123891984	1	-	123713275	123762136	789624	15	60,110,100,140,298,180,197,124,89,151,85,140,110,99,629,	0,172,41387,43937,48596,53697,55250,57640,66891,84700,85839,129073,149338,166935,178080,
#Partially deleted in new
chr10	123745635	123891814	chr10:123745635-123891814	3	-	123746763	123891659	789624	14	1382,100,140,298,180,197,124,89,151,85,140,110,99,459,	0,9027,11577,16236,21337,22890,25280,34531,52340,53479,96713,116978,134575,145720,
#Deleted in new
chr10	123776669	123777749	chr10:123776669-123777749	3	+	123776669	123776669	8553170	2	444,362,	0,718,
#Partially deleted in new
chr10	123880208	123887166	chr10:123880208-123887166	0	-	123880208	123880208	8553170	2	101,198,	0,6760,
#Partially deleted in new
chr10	123913573	123931597	chr10:123913573-123931597	3	-	123913573	123913573	8553170	3	225,89,75,	0,455,17949,
#Deleted in new
chr10	123991909	123992669	chr10:123991909-123992669	7	+	123991909	123991909	16724991	1	760,	0,
#Deleted in new
chr10	124004303	124004828	chr10:124004303-124004828	7	-	124004303	124004303	16724991	1	525,	0,
#Partially deleted in new
chr10	124007665	124093607	chr10:124007665-124093607	3	-	124010148	124046212	789624	8	2674,148,157,157,147,340,1058,139,	0,4667,13590,30849,34635,36914,38001,85803,
#Partially deleted in new
chr10	124007667	124092454	chr10:124007667-124092454	1	-	124010148	124046212	789624	8	2672,148,157,157,147,340,1058,131,	0,4665,13588,30847,34633,36912,37999,84656,
#Partially deleted in new
chr10	124019652	124092414	chr10:124019652-124092414	1	-	124021081	124046212	789624	6	1760,157,147,340,1058,91,	0,18862,22648,24927,26014,72671,
#Partially deleted in new
chr10	124021081	124038619	chr10:124021081-124038619	0	-	124021081	124021081	8553170	2	331,105,	0,17433,
#Partially deleted in new
chr10	124046012	124093582	chr10:124046012-124093582	0	-	124046012	124046212	789624	2	712,114,	0,47456,
#Partially deleted in new
chr10	124397302	124418976	chr10:124397302-124418976	1	-	124397941	124408750	0	9	800,145,114,129,123,128,96,225,104,	0,3537,4423,5624,6495,8133,11239,11438,21570,
#Partially deleted in new
chr10	124397306	124418936	chr10:124397306-124418936	3	-	124397941	124412171	0	10	796,145,114,129,123,128,96,225,228,64,	0,3533,4419,5620,6491,8129,11235,11434,14666,21566,
#Partially deleted in new
chr10	124398020	124403336	chr10:124398020-124403336	0	-	124398020	124398020	8553170	4	82,145,114,410,	0,2819,3705,4906,
#Partially deleted in new
chr10	124401730	124408791	chr10:124401730-124408791	0	-	124401730	124401730	8553170	7	109,129,123,128,174,96,51,	0,1196,2067,3705,5572,6811,7010,
#Partially deleted in new
chr10	124403844	124405929	chr10:124403844-124405929	0	-	124403844	124403844	8553170	2	76,494,	0,1591,
#Partially deleted in new
chr10	124407355	124418193	chr10:124407355-124418193	0	-	124407355	124407355	8553170	5	61,96,225,228,36,	0,1186,1385,4617,10802,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	124408821	124415072	chr10:124408821-124415072	0	-	124408821	124408821	8553170	4	144,228,87,120,	0,3151,5524,6131,
#Partially deleted in new
chr10	124408892	124414436	chr10:124408892-124414436	0	-	124408892	124408892	8553170	3	73,228,319,	0,3080,5225,
#Deleted in new
chr10	124445238	124450184	chr10:124445238-124450184	3	-	124447428	124449943	789624	2	2909,455,	0,4491,
#Deleted in new
chr10	124447151	124448510	chr10:124447151-124448510	0	+	124447151	124447151	8553170	1	1359,	0,
#Deleted in new
chr10	124447712	124450048	chr10:124447712-124450048	3	+	124447712	124447712	8553170	3	146,50,229,	0,931,2107,
#Partially deleted in new
chr10	124461833	124498514	chr10:124461833-124498514	1	+	124461862	124498342	789624	6	154,188,154,64,93,187,	0,22305,26588,35127,36202,36494,
#Partially deleted in new
chr10	124461834	124614141	chr10:124461834-124614141	3	+	124461862	124613360	0	7	153,188,154,64,93,92,878,	0,22304,26587,35126,36201,55345,151429,
#Partially deleted in new
chr10	124461842	124614141	chr10:124461842-124614141	1	+	124461862	124613272	0	6	145,188,154,64,93,878,	0,22296,26579,35118,36193,151421,
#Partially deleted in new
chr10	124488428	124493877	chr10:124488428-124493877	0	+	124488428	124488428	8553170	2	147,158,	0,5291,
#Partially deleted in new
chr10	124488462	124517376	chr10:124488462-124517376	0	+	124488462	124488462	8553170	4	113,64,93,197,	0,8498,9573,28717,
#Deleted in new
chr10	124489822	124490578	chr10:124489822-124490578	7	-	124489822	124489822	16724991	2	144,351,	0,405,
#Partially deleted in new
chr10	124545983	124613380	chr10:124545983-124613380	0	+	124545983	124545983	8553170	2	206,117,	0,67280,
#Partially deleted in new
chr10	124546024	124617888	chr10:124546024-124617888	0	+	124546024	124546024	8553170	3	165,39,1351,	0,67239,70513,
#Partially deleted in new
chr10	124605199	124613425	chr10:124605199-124613425	0	+	124605199	124605199	8553170	2	316,162,	0,8064,
#Deleted in new
chr10	124612832	124613384	chr10:124612832-124613384	0	+	124612832	124612832	8553170	2	118,121,	0,431,
#Partially deleted in new
chr10	124617079	124791727	chr10:124617079-124791727	3	-	124760408	124791727	789624	10	1714,773,55,252,118,217,108,115,66,4,	0,64527,79078,89556,143306,148312,157595,171963,173193,174644,
#Partially deleted in new
chr10	124619291	124744050	chr10:124619291-124744050	3	-	124623241	124706713	789624	5	4313,773,55,252,38,	0,62315,76866,87344,124721,
#Partially deleted in new
chr10	124621670	124742970	chr10:124621670-124742970	1	-	124623241	124706713	789624	5	1934,773,55,252,543,	0,59936,74487,84965,120757,
#Deleted in new
chr10	124623352	124624079	chr10:124623352-124624079	3	+	124623352	124623352	8553170	1	727,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	124667189	124744269	chr10:124667189-124744269	1	-	124667408	124706713	789624	5	231,773,55,252,257,	0,14417,28968,39446,76823,
#Partially deleted in new
chr10	124703624	124714217	chr10:124703624-124714217	3	+	124703624	124703624	8553170	2	707,784,	0,9809,
#Deleted in new
chr10	124704043	124705700	chr10:124704043-124705700	0	+	124704043	124704043	8553170	2	288,129,	0,1528,
#Partially deleted in new
chr10	124704183	124713703	chr10:124704183-124713703	1	+	124704183	124704183	8553170	3	148,140,270,	0,3667,9250,
#Partially deleted in new
chr10	124748148	124760503	chr10:124748148-124760503	0	-	124760408	124760503	789624	2	338,186,	0,12169,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	124757830	124791868	chr10:124757830-124791868	0	-	124774762	124791833	789624	7	2673,259,217,108,119,66,145,	0,4469,7561,16844,31208,32442,33893,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	124759953	124791870	chr10:124759953-124791870	3	-	124760502	124791833	789624	7	550,259,217,108,115,66,147,	0,2346,5438,14721,29089,30319,31770,
#Partially deleted in new
chr10	124760145	124791868	chr10:124760145-124791868	0	-	124774762	124791833	789624	6	358,217,108,119,66,145,	0,5246,14529,28893,30127,31578,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	124760415	124774897	chr10:124760415-124774897	0	-	124760415	124760415	8553170	4	88,259,217,223,	0,1884,4976,14259,
#Partially deleted in new
chr10	124760473	124765791	chr10:124760473-124765791	0	-	124760473	124760473	8553170	2	30,400,	0,4918,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	124766195	124766297	chr10:124766195-124766297	3	+	124766195	124766195	8553170	1	102,	0,
#Partially deleted in new
chr10	124801784	124836670	chr10:124801784-124836670	3	+	124801829	124834971	789624	9	117,91,37,67,191,120,85,115,2169,	0,5046,14791,17599,24810,26971,27608,29564,32717,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	124814957	124815062	chr10:124814957-124815062	3	-	124814957	124814957	8553170	1	105,	0,
#Deleted in new
chr10	124867509	124868326	chr10:124867509-124868326	7	+	124867509	124867509	16724991	2	493,271,	0,546,
#Partially deleted in new
chr10	124917142	124942881	chr10:124917142-124942881	3	+	124917142	124917142	8553170	2	130,425,	0,25314,
#Partially deleted in new
chr10	124942122	124988189	chr10:124942122-124988189	3	+	124942493	124984992	0	9	1185,188,154,72,199,121,130,230,3416,	0,24471,29842,31522,32077,39586,41052,41336,42651,
#Deleted in new
chr10	124981410	124983496	chr10:124981410-124983496	0	+	124981410	124981410	8553170	3	419,130,38,	0,1764,2048,
#Partially deleted in new
chr10	124984316	125160513	chr10:124984316-125160513	3	-	124989517	125039054	0	11	5382,118,128,131,215,207,145,155,159,104,195,	0,8378,8885,9538,10152,13647,18643,19021,54680,126673,176002,
#Partially deleted in new
chr10	124988937	125027890	chr10:124988937-125027890	1	-	124989517	125027759	0	9	761,118,128,131,215,207,145,155,1809,	0,3757,4264,4917,5531,9026,14022,14400,37144,
#Partially deleted in new
chr10	124989134	125006013	chr10:124989134-125006013	1	-	124989517	125005808	0	9	564,118,128,131,215,207,145,155,467,	0,3560,4067,4720,5334,8829,13825,14203,16412,
#Partially deleted in new
chr10	124989224	125161026	chr10:124989224-125161026	1	-	124989517	125039054	0	11	474,118,128,131,215,207,145,155,159,104,200,	0,3470,3977,4630,5244,8739,13735,14113,49772,121765,171602,
#Partially deleted in new
chr10	124989224	125160499	chr10:124989224-125160499	1	-	124989517	125039054	0	11	474,118,128,131,215,207,145,155,159,101,181,	0,3470,3977,4630,5244,8739,13735,14113,49772,144287,171094,
#Partially deleted in new
chr10	124989224	125158716	chr10:124989224-125158716	1	-	124989517	125039054	0	11	474,118,128,131,215,207,145,155,159,104,82,	0,3470,3977,4630,5244,8739,13735,14113,49772,121765,169410,
#Deleted in new
chr10	124993266	125003000	chr10:124993266-125003000	0	-	124994502	125003000	789624	5	63,131,138,207,41,	0,588,1202,4697,9693,
#Deleted in new
chr10	124996063	125001491	chr10:124996063-125001491	3	+	124996063	124996063	8553170	1	5428,	0,
#Deleted in new
chr10	124997791	125003384	chr10:124997791-125003384	0	-	124997791	124997791	8553170	3	379,145,47,	0,5168,5546,
#Partially deleted in new
chr10	125003337	125160145	chr10:125003337-125160145	0	-	125003337	125003337	8553170	3	155,159,289,	0,35659,156519,
#Partially deleted in new
chr10	125003463	125028028	chr10:125003463-125028028	0	-	125003463	125003463	8553170	2	29,71,	0,24494,
#Deleted in new
chr10	125032782	125032870	chr10:125032782-125032870	3	-	125032782	125032782	5263520	1	88,	0,
#Partially deleted in new
chr10	125038996	125161170	chr10:125038996-125161170	0	-	125038996	125038996	8553170	3	159,202,344,	0,121322,121830,
#Partially deleted in new
chr10	125039045	125161061	chr10:125039045-125161061	0	-	125039045	125039054	8553170	4	110,129,104,235,	0,49145,71944,121781,
#Partially deleted in new
chr10	125100586	125138250	chr10:125100586-125138250	0	-	125100586	125100586	8553170	4	186,101,98,40,	0,32925,37420,37624,
#Partially deleted in new
chr10	125110996	125159957	chr10:125110996-125159957	0	-	125110996	125110996	8553170	3	97,212,101,	0,11660,48860,
#Deleted in new
chr10	125162378	125162971	chr10:125162378-125162971	3	+	125162378	125162378	8553170	1	593,	0,
#Deleted in new
chr10	125166676	125166937	chr10:125166676-125166937	7	+	125166676	125166676	16724991	1	261,	0,
#Deleted in new
chr10	125473685	125473932	chr10:125473685-125473932	7	-	125473685	125473685	16724991	1	247,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	125574370	125578445	chr10:125574370-125578445	3	+	125574370	125574370	789624	5	179,115,122,98,235,	0,654,1509,1884,3840,
#Partially deleted in new
chr10	125574444	125578366	chr10:125574444-125578366	0	+	125574444	125574444	8553170	3	105,122,156,	0,1435,3766,
#Partially deleted in new
chr10	125576521	125683106	chr10:125576521-125683106	0	-	125576748	125682989	789624	4	353,81,132,168,	0,84499,85324,106417,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	125621612	125683130	chr10:125621612-125683130	0	-	125621612	125682989	789624	4	33,81,132,192,	0,39408,40233,61326,
#Partially deleted in new
chr10	125655693	125683144	chr10:125655693-125683144	3	-	125655899	125682989	789624	4	503,81,132,206,	0,5327,6152,27245,
#Partially deleted in new
chr10	125666874	125667950	chr10:125666874-125667950	7	-	125666874	125666874	16724991	1	1076,	0,
#Partially deleted in new
chr10	125683228	125707028	chr10:125683228-125707028	0	+	125683228	125683228	8553170	6	103,171,64,108,102,74,	0,3048,15895,17284,23353,23726,
#Partially deleted in new
chr10	125683238	125686648	chr10:125683238-125686648	1	+	125683238	125683238	8553170	3	93,171,101,	0,3038,3309,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	125683242	125709677	chr10:125683242-125709677	3	+	125683242	125683242	5263520	5	89,171,64,102,2723,	0,3034,15881,23339,23712,
#Partially deleted in new
chr10	125683292	125700609	chr10:125683292-125700609	1	+	125683292	125683292	8553170	4	39,171,64,97,	0,2984,15831,17220,
#Partially deleted in new
chr10	125697528	125707028	chr10:125697528-125707028	0	+	125697528	125697528	8553170	5	295,283,64,102,74,	0,884,1595,9053,9426,
#Partially deleted in new
chr10	125697603	125707004	chr10:125697603-125707004	0	+	125697603	125697603	8553170	5	220,196,64,102,50,	0,896,1520,8978,9351,
#Partially deleted in new
chr10	125697718	125707004	chr10:125697718-125707004	0	+	125697718	125697718	8553170	4	105,283,64,423,	0,694,1405,8863,
#Partially deleted in new
chr10	125698604	125707004	chr10:125698604-125707004	0	+	125698604	125698604	8553170	4	91,122,102,50,	0,461,7977,8350,
#Partially deleted in new
chr10	125698786	125706974	chr10:125698786-125706974	0	+	125698786	125698786	8553170	3	112,122,393,	0,279,7795,
#Partially deleted in new
chr10	125698860	125707004	chr10:125698860-125707004	0	+	125698860	125698860	8553170	2	327,423,	0,7721,
#Partially deleted in new
chr10	125700435	125719460	chr10:125700435-125719460	0	-	125700435	125700435	8553170	5	147,149,359,70,39,	0,6616,6965,9062,18986,
#Partially deleted in new
chr10	125700436	125707549	chr10:125700436-125707549	1	-	125700436	125700436	8553170	4	119,29,149,149,	0,3750,6615,6964,
#Partially deleted in new
chr10	125707236	125719546	chr10:125707236-125719546	0	-	125707236	125707236	8553170	3	523,70,125,	0,2261,12185,
#Partially deleted in new
chr10	125707301	125719524	chr10:125707301-125719524	0	-	125707301	125707301	8553170	2	458,29,	0,12194,
#Partially deleted in new
chr10	125707415	125749525	chr10:125707415-125749525	3	-	125707415	125707415	8553170	3	344,70,151,	0,2082,41959,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	125709005	125719448	chr10:125709005-125719448	0	-	125709005	125709005	8553170	2	562,27,	0,10416,
#Deleted in new
chr10	125718770	125719365	chr10:125718770-125719365	3	-	125718770	125718770	8553170	2	211,89,	0,506,
#Partially deleted in new
chr10	125719514	125763579	chr10:125719514-125763579	0	+	125719807	125742239	789624	26	401,209,67,126,125,157,102,122,112,148,109,112,261,72,151,189,201,126,219,224,159,150,154,116,152,279,	0,1689,3553,4296,5803,6167,9488,9843,10773,13889,14120,14557,16129,18403,18780,20948,21486,22705,23543,26192,28021,28348,29897,33284,34179,43786,
#Partially deleted in new
chr10	125719514	125764143	chr10:125719514-125764143	0	+	125719807	125730287	789624	26	401,209,67,126,125,157,102,122,128,148,109,112,261,72,151,189,201,219,224,159,150,154,116,152,224,103,	0,1689,3553,4296,5803,6167,9488,9843,10757,13889,14120,14557,16129,18403,18780,20948,21486,23543,26192,28021,28348,29897,33284,34179,43786,44526,
#Partially deleted in new
chr10	125719575	125763651	chr10:125719575-125763651	1	+	125719807	125763472	789624	25	340,209,67,126,125,157,102,122,112,148,109,112,261,72,151,189,201,219,224,159,150,154,116,152,351,	0,1628,3492,4235,5742,6106,9427,9782,10712,13828,14059,14496,16068,18342,18719,20887,21425,23482,26131,27960,28287,29836,33223,34118,43725,
#Partially deleted in new
chr10	125719575	125763651	chr10:125719575-125763651	0	+	125719807	125737946	789624	25	340,209,67,126,125,157,102,122,112,148,109,112,261,67,151,189,201,219,224,159,150,154,116,152,351,	0,1628,3492,4235,5742,6106,9427,9782,10712,13828,14059,14496,16068,18347,18719,20887,21425,23482,26131,27960,28287,29836,33223,34118,43725,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr10	125719701	125749096	chr10:125719701-125749096	0	+	125719701	125719701	8553170	20	214,209,67,126,125,157,122,112,148,109,112,261,72,151,189,201,219,224,159,1234,	0,1502,3366,4109,5616,5980,9656,10586,13702,13933,14370,15942,18216,18593,20761,21299,23356,26005,27834,28161,
#Partially deleted in new
chr10	125719702	125764139	chr10:125719702-125764139	3	+	125719807	125763472	789624	24	213,209,67,126,125,157,122,112,148,109,112,261,72,151,189,201,219,224,159,150,154,116,152,839,	0,1501,3365,4108,5615,5979,9655,10585,13701,13932,14369,15941,18215,18592,20760,21298,23355,26004,27833,28160,29709,33096,33991,43598,
#Partially deleted in new
chr10	125725633	125749525	chr10:125725633-125749525	0	-	125725633	125725633	8553170	2	233,151,	0,23741,
#Partially deleted in new
chr10	125725636	125749525	chr10:125725636-125749525	0	-	125725636	125725636	8553170	3	223,160,151,	0,19902,23738,
#Partially deleted in new
chr10	125725765	125735749	chr10:125725765-125735749	0	+	125725765	125731909	789624	9	73,102,122,112,61,148,109,112,106,	0,3237,3592,4522,6099,7638,7869,8306,9878,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	125735886	125741665	chr10:125735886-125741665	0	+	125735886	125741524	789624	5	18,72,151,189,665,	0,2031,2408,4576,5114,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	125744726	125750466	chr10:125744726-125750466	0	-	125744726	125744726	8553170	4	164,160,154,27,	0,812,4648,5713,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	125744728	125750482	chr10:125744728-125750482	0	-	125744728	125744728	789624	4	123,160,154,43,	0,810,4646,5711,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	125744821	125752075	chr10:125744821-125752075	0	-	125744821	125744821	8553170	4	30,160,42,160,	0,717,5618,7094,
#Duplicated in new
chr10	125744821	125752072	chr10:125744821-125752072	3	-	125744821	125744821	8553170	5	30,160,272,42,88,	0,717,4553,5618,7163,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	125744836	125752074	chr10:125744836-125752074	1	-	125744836	125744836	8553170	5	54,160,154,42,159,	0,702,4538,5603,7079,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	125744854	125752073	chr10:125744854-125752073	0	-	125744854	125744854	8553170	4	36,160,42,158,	0,684,5585,7061,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	125745229	125752065	chr10:125745229-125752065	1	-	125745229	125745229	8553170	3	469,42,81,	0,5210,6755,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	125746700	125749441	chr10:125746700-125749441	0	+	125746700	125746700	8553170	3	994,150,30,	0,1162,2711,
#Partially deleted in new
chr10	125747952	125749813	chr10:125747952-125749813	0	+	125747952	125747952	8553170	2	60,402,	0,1459,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	125748814	125752074	chr10:125748814-125752074	1	-	125748814	125748814	8553170	4	426,154,42,90,	0,560,1625,3170,
#Partially deleted in new
chr10	125749272	125763706	chr10:125749272-125763706	0	+	125749272	125749272	8553170	3	293,152,406,	0,4421,14028,
#Partially deleted in new
chr10	125749296	125764143	chr10:125749296-125764143	0	+	125749296	125749296	8553170	4	269,116,152,843,	0,3502,4397,14004,
#Partially deleted in new
chr10	125753778	125763582	chr10:125753778-125763582	0	+	125753778	125761231	789624	3	67,87,282,	0,7449,9522,
#Partially deleted in new
chr10	125766452	125775821	chr10:125766452-125775821	3	-	125766661	125775821	789624	7	509,173,258,142,140,535,162,	0,1079,3881,5765,6158,7378,9207,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	125784979	125796163	chr10:125784979-125796163	0	-	125785215	125796163	789624	3	281,99,61,	0,9900,11123,
#Partially deleted in new
chr10	125785516	125798119	chr10:125785516-125798119	0	-	125785710	125798119	789624	4	323,99,86,55,	0,9363,10586,12548,
#Partially deleted in new
chr10	125788576	125795227	chr10:125788576-125795227	0	-	125788576	125788576	8553170	2	429,348,	0,6303,
#Partially deleted in new
chr10	125788577	125823256	chr10:125788577-125823256	1	-	125788867	125816499	0	10	428,99,86,81,75,75,97,84,89,228,	0,6302,7525,9487,18835,23636,26456,27599,27859,34451,
#Partially deleted in new
chr10	125788577	125823285	chr10:125788577-125823285	3	-	125788867	125816499	789624	10	428,99,86,81,75,75,97,84,89,257,	0,6302,7525,9487,18835,23636,26456,27599,27859,34451,
#Partially deleted in new
chr10	125788581	125796190	chr10:125788581-125796190	0	-	125788581	125788581	8553170	4	424,246,99,88,	0,701,6298,7521,
#Partially deleted in new
chr10	125788582	125816632	chr10:125788582-125816632	1	-	125788867	125816499	0	9	423,99,86,81,75,75,97,84,196,	0,6297,7520,9482,18830,23631,26451,27594,27854,
#Partially deleted in new
chr10	125788585	125807483	chr10:125788585-125807483	0	-	125795062	125807483	8553170	7	420,246,99,97,86,81,71,	0,697,6294,6476,7517,9479,18827,
#Partially deleted in new
chr10	125788585	125823199	chr10:125788585-125823199	0	-	125802998	125816499	8553170	13	420,246,99,97,86,81,75,75,75,97,84,89,171,	0,697,6294,6476,7517,9479,14364,18827,23628,26448,27591,27851,34443,
#Partially deleted in new
chr10	125788585	125823201	chr10:125788585-125823201	1	-	125788867	125816499	789624	10	420,81,99,86,75,75,97,84,89,173,	0,697,6294,7517,18827,23628,26448,27591,27851,34443,
#Partially deleted in new
chr10	125788585	125816510	chr10:125788585-125816510	1	-	125788867	125816499	789624	10	420,81,99,86,81,75,75,97,84,74,	0,697,6294,7517,9479,18827,23628,26448,27591,27851,
#Partially deleted in new
chr10	125788589	125815082	chr10:125788589-125815082	0	-	125802998	125815082	8553170	9	416,99,86,72,81,36,75,75,49,	0,6290,7513,8200,9475,14399,18823,23624,26444,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	125788604	125800695	chr10:125788604-125800695	0	-	125788604	125788604	8553170	5	401,99,86,230,2631,	0,6275,7498,8807,9460,
#Partially deleted in new
chr10	125788724	125798103	chr10:125788724-125798103	0	-	125794376	125798103	8553170	6	281,166,367,99,86,39,	0,3854,5297,6155,7378,9340,
#Partially deleted in new
chr10	125788914	125815060	chr10:125788914-125815060	0	-	125794376	125815060	8553170	8	91,367,99,86,81,75,75,27,	0,5107,5965,7188,9150,18498,23299,26119,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	125791519	125807465	chr10:125791519-125807465	0	-	125794376	125807465	789624	5	2869,99,86,81,53,	0,3360,4583,6545,15893,
#Partially deleted in new
chr10	125793857	125823211	chr10:125793857-125823211	0	-	125796853	125816499	8553170	11	531,99,86,72,81,75,75,97,84,89,183,	0,1022,2245,2932,4207,13555,18356,21176,22319,22579,29171,
#Partially deleted in new
chr10	125794899	125823248	chr10:125794899-125823248	0	-	125794899	125816499	789624	8	79,86,81,75,75,97,89,220,	0,1203,3165,12513,17314,20134,21537,28129,
#Partially deleted in new
chr10	125794901	125816252	chr10:125794901-125816252	0	-	125797417	125816252	8553170	9	77,86,72,14,81,75,75,97,76,	0,1201,1888,2510,3163,12511,17312,20132,21275,
#Partially deleted in new
chr10	125797502	125823039	chr10:125797502-125823039	0	-	125797502	125797502	8553170	8	139,81,75,75,97,84,89,11,	0,562,9910,14711,17531,18674,18934,25526,
#Partially deleted in new
chr10	125802056	125823196	chr10:125802056-125823196	1	-	125802998	125816499	789624	7	968,75,75,97,84,89,168,	0,5356,10157,12977,14120,14380,20972,
#Partially deleted in new
chr10	125807149	125823089	chr10:125807149-125823089	1	-	125807404	125816499	789624	6	338,75,97,84,89,61,	0,5064,7884,9027,9287,15879,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	125819739	125819822	chr10:125819739-125819822	3	+	125819739	125819739	5263520	1	83,	0,
#Partially deleted in new
chr10	125823545	125836553	chr10:125823545-125836553	1	+	125823557	125836274	789624	7	177,75,81,90,188,175,450,	0,3045,4012,7016,7874,10226,12558,
#Partially deleted in new
chr10	125823545	125842805	chr10:125823545-125842805	1	+	125823557	125841359	789624	7	177,75,81,90,188,175,1551,	0,3045,4012,7016,7874,10226,17709,
#Partially deleted in new
chr10	125823545	125853695	chr10:125823545-125853695	3	+	125823557	125853243	789624	8	177,75,81,90,188,175,76,571,	0,3045,4012,7016,7874,10226,17709,29579,
#Partially deleted in new
chr10	125823609	125831650	chr10:125823609-125831650	0	+	125823609	125823609	8553170	4	113,75,81,231,	0,2981,3948,7810,
#Partially deleted in new
chr10	125825493	125831537	chr10:125825493-125831537	0	+	125825493	125825493	8553170	4	1172,81,90,118,	0,2064,5068,5926,
#Partially deleted in new
chr10	125836336	125854859	chr10:125836336-125854859	1	-	125836686	125852606	789624	8	519,182,188,150,192,159,100,899,	0,1869,2664,4510,5406,15956,16206,17624,
#Partially deleted in new
chr10	125836339	125881315	chr10:125836339-125881315	3	-	125836686	125880824	789624	11	516,182,188,150,192,159,100,243,373,194,773,	0,1866,2661,4507,5403,15953,16203,17621,23263,30650,44203,
#Partially deleted in new
chr10	125867128	125896436	chr10:125867128-125896436	0	-	125867128	125880824	789624	3	55,529,219,	0,13414,29089,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	125869294	125869576	chr10:125869294-125869576	3	+	125869294	125869294	8553170	1	282,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	125890565	125890678	chr10:125890565-125890678	3	-	125890565	125890565	8553170	1	113,	0,
#Partially deleted in new
chr10	125896538	126009590	chr10:125896538-126009590	3	+	125896642	126009438	789624	11	117,178,125,82,75,66,166,144,78,45,218,	0,83622,92012,98878,100011,100881,108345,111868,112515,112683,112834,
#Partially deleted in new
chr10	125896538	126009592	chr10:125896538-126009592	1	+	125980165	126009438	789624	11	117,178,125,82,75,66,166,144,78,45,220,	0,83622,92012,98878,100011,100881,108345,111868,112515,112683,112834,
#Deleted in new
chr10	125960207	125960406	chr10:125960207-125960406	7	-	125960207	125960207	16724991	1	199,	0,
#Deleted in new
chr10	125972187	125973126	chr10:125972187-125973126	3	-	125972187	125972187	789624	3	154,109,165,	0,549,774,
#Partially deleted in new
chr10	125973372	125995489	chr10:125973372-125995489	0	+	125980165	125995489	789624	4	123,178,125,73,	0,6788,15178,22044,
#Partially deleted in new
chr10	125973429	125980896	chr10:125973429-125980896	0	+	125973429	125973429	8553170	2	66,736,	0,6731,
#Partially deleted in new
chr10	125973498	125995498	chr10:125973498-125995498	0	+	125980165	125995498	789624	5	269,178,125,18,82,	0,6662,15052,15931,21918,
#Partially deleted in new
chr10	125973514	126009454	chr10:125973514-126009454	0	+	125980165	126009438	789624	9	79,178,125,18,82,75,166,144,82,	0,6646,15036,15915,21902,23035,31369,34892,35858,
#Partially deleted in new
chr10	125974894	125995558	chr10:125974894-125995558	1	+	125980165	125995502	789624	5	59,178,125,18,142,	0,5266,13656,14535,20522,
#Partially deleted in new
chr10	125988550	126009592	chr10:125988550-126009592	0	+	125988550	125988550	8553170	8	125,82,75,66,166,144,78,371,	0,6866,7999,8869,16333,19856,20503,20671,
#Partially deleted in new
chr10	125995416	126009592	chr10:125995416-126009592	0	+	125995416	126009438	789624	6	82,75,66,166,144,220,	0,1133,2003,9467,12990,13956,
#Partially deleted in new
chr10	125995438	126009592	chr10:125995438-126009592	0	+	125995438	125995438	8553170	7	60,75,66,166,69,144,539,	0,1111,1981,9445,11675,12968,13615,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	126004147	126009590	chr10:126004147-126009590	0	+	126004147	126004147	8553170	3	902,144,537,	0,4259,4906,
#Partially deleted in new
chr10	126012380	126388455	chr10:126012380-126388455	3	-	126017278	126388145	789624	23	4959,131,180,109,136,109,78,199,109,196,90,178,149,85,170,72,66,187,77,88,74,98,398,	0,7314,23765,25860,26913,30659,33674,36872,37180,52425,54336,59096,81604,86035,88691,96212,97394,105657,123203,142837,266534,318031,375677,
#Partially deleted in new
chr10	126041345	126388455	chr10:126041345-126388455	1	-	126042131	126388145	789624	19	890,109,78,199,109,196,90,178,149,85,170,72,66,187,77,88,74,98,398,	0,1694,4709,7907,8215,23460,25371,30131,52639,57070,59726,67247,68429,76692,94238,113872,237569,289066,346712,
#Partially deleted in new
chr10	126049602	126070633	chr10:126049602-126070633	0	-	126049602	126049602	8553170	4	67,196,90,247,	0,15203,17114,20784,
#Deleted in new
chr10	126064694	126067006	chr10:126064694-126067006	0	-	126064694	126064694	8553170	2	307,290,	0,2022,
#Partially deleted in new
chr10	126090735	126109788	chr10:126090735-126109788	0	-	126090735	126090735	8553170	4	258,37,72,14,	0,10469,17857,19039,
#Partially deleted in new
chr10	126101147	126388455	chr10:126101147-126388455	0	-	126101147	126388145	789624	9	94,72,66,187,77,79,74,98,398,	0,7445,8627,16890,34436,54079,177767,229264,286910,
#Partially deleted in new
chr10	126135367	126155305	chr10:126135367-126155305	0	-	126135367	126135367	8553170	2	293,79,	0,19859,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	126145473	126145582	chr10:126145473-126145582	7	-	126145473	126145473	16724991	1	109,	0,
#Partially deleted in new
chr10	126272817	126273411	chr10:126272817-126273411	7	+	126272817	126272817	16724991	1	594,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	126413868	126421879	chr10:126413868-126421879	3	-	126413868	126413868	789624	4	870,112,93,93,	0,2931,3847,7918,
#Partially deleted in new
chr10	126424996	126504118	chr10:126424996-126504118	0	-	126425863	126504118	789624	6	906,100,64,178,185,162,	0,994,4790,34043,36404,78960,
#Partially deleted in new
chr10	126425008	126521441	chr10:126425008-126521441	3	-	126425863	126521320	789624	9	894,100,64,178,185,291,1129,92,143,	0,982,4778,34031,36392,39687,78948,88839,96290,
#Partially deleted in new
chr10	126425551	126463376	chr10:126425551-126463376	1	-	126425863	126459148	789624	6	351,100,64,178,185,134,	0,439,4235,33488,35849,37691,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	126425767	126520859	chr10:126425767-126520859	1	-	126425927	126505058	789624	8	323,64,178,185,291,1129,92,733,	0,4019,33272,35633,38928,78189,88080,94359,
#Partially deleted in new
chr10	126426065	126521441	chr10:126426065-126521441	0	-	126426065	126521320	789624	8	25,64,178,185,291,1129,92,143,	0,3721,32974,35335,38630,77891,87782,95233,
#Partially deleted in new
chr10	126502659	126524823	chr10:126502659-126524823	0	-	126502659	126502659	8553170	6	175,1129,92,228,97,314,	0,1297,11188,20063,20818,21850,
#Partially deleted in new
chr10	126504431	126670446	chr10:126504431-126670446	0	-	126504431	126670357	789624	4	654,92,73,206,	0,9416,142133,165809,
#Partially deleted in new
chr10	126504873	126521466	chr10:126504873-126521466	0	-	126512110	126521320	789624	4	212,94,92,168,	0,7149,8974,16425,
#Deleted in new
chr10	126779701	126779774	chr10:126779701-126779774	3	-	126779701	126779701	8553170	1	73,	0,
#Partially deleted in new
chr10	126905408	127452517	chr10:126905408-127452517	3	+	126905517	127451427	0	52	155,84,41,56,97,149,136,158,82,136,73,80,126,125,99,73,104,184,98,90,101,135,109,71,107,128,96,102,95,79,101,59,149,86,157,41,91,120,90,105,142,79,85,87,177,84,138,146,199,154,152,1186,	0,65293,72539,76509,82112,85046,91339,92683,93945,94763,103323,106886,113301,117791,119276,120943,126241,126728,132310,137216,137655,147272,156259,200822,204839,220065,222260,342599,351926,433597,438237,449260,456655,468372,468649,474673,475869,479381,497646,498916,503628,503904,505431,509743,512956,514257,520465,527874,533618,538717,541985,545923,
#Partially deleted in new
chr10	126905455	127451465	chr10:126905455-127451465	1	+	126905517	127451427	789624	52	108,84,41,56,97,149,136,158,82,136,73,143,126,125,99,73,104,184,98,90,101,135,109,71,107,128,96,102,95,79,101,59,149,86,157,41,91,120,90,105,142,79,85,87,177,84,138,146,199,154,152,134,	0,65246,72492,76462,82065,84999,91292,92636,93898,94716,103276,106776,113254,117744,119229,120896,126194,126681,132263,137169,137608,147225,156212,200775,204792,220018,222213,342552,351879,433550,438190,449213,456608,468325,468602,474626,475822,479334,497599,498869,503581,503857,505384,509696,512909,514210,520418,527827,533571,538670,541938,545876,
#Partially deleted in new
chr10	126988094	127000640	chr10:126988094-127000640	3	-	126988094	126988094	8553170	3	351,147,68,	0,12181,12478,
#Partially deleted in new
chr10	126997817	127000628	chr10:126997817-127000628	1	-	126997817	126997817	8553170	4	885,28,144,56,	0,1546,2458,2755,
#Partially deleted in new
chr10	127000276	127026422	chr10:127000276-127026422	0	-	127000276	127000276	8553170	4	146,420,55,151,	0,296,1278,25995,
#Partially deleted in new
chr10	127000572	127026423	chr10:127000572-127026423	0	-	127000572	127000572	8553170	4	420,55,154,152,	0,982,14437,25699,
#Partially deleted in new
chr10	127000706	127026423	chr10:127000706-127026423	0	-	127000706	127000706	8553170	5	286,55,154,175,152,	0,848,14303,15216,25565,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	127001353	127026423	chr10:127001353-127026423	0	-	127001353	127001353	8553170	4	256,163,154,152,	0,6057,13656,24918,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	127001372	127026423	chr10:127001372-127026423	0	-	127001372	127001372	8553170	6	237,115,74,175,84,152,	0,13484,13717,14550,15125,24899,
#Partially deleted in new
chr10	127013466	127026423	chr10:127013466-127026423	0	-	127013466	127013466	8553170	5	251,154,175,70,152,	0,1543,2456,5121,12805,
#Partially deleted in new
chr10	127013500	127026475	chr10:127013500-127026475	3	-	127013500	127013500	8553170	4	217,154,175,204,	0,1509,2422,12771,
#Partially deleted in new
chr10	127016042	127026423	chr10:127016042-127026423	0	-	127016042	127016042	8553170	3	55,373,152,	0,2545,10229,
#Partially deleted in new
chr10	127024769	127026507	chr10:127024769-127026507	1	-	127024769	127024769	8553170	2	494,236,	0,1502,
#Partially deleted in new
chr10	127110244	127128096	chr10:127110244-127128096	0	+	127110244	127110244	8553170	3	110,128,428,	0,15229,17424,
#Partially deleted in new
chr10	127135425	127196158	chr10:127135425-127196158	1	-	127137836	127176395	789624	5	2595,1189,263,126,162,	0,39786,41451,57179,60571,
#Partially deleted in new
chr10	127135429	127196158	chr10:127135429-127196158	3	-	127137836	127176395	789624	6	2591,72,1189,263,126,162,	0,18422,39782,41447,57175,60567,
#Partially deleted in new
chr10	127136193	127177009	chr10:127136193-127177009	1	-	127137836	127176395	789624	3	1827,1189,133,	0,39018,40683,
#Partially deleted in new
chr10	127248007	127344600	chr10:127248007-127344600	0	+	127248007	127248007	8553170	5	102,95,79,101,402,	0,9327,90998,95638,96191,
#Partially deleted in new
chr10	127248024	127257788	chr10:127248024-127257788	0	+	127248024	127248024	8553170	2	85,454,	0,9310,
#Partially deleted in new
chr10	127248067	127272196	chr10:127248067-127272196	0	+	127248067	127248067	8553170	3	42,95,186,	0,9267,23943,
#Deleted in new
chr10	127549368	127552639	chr10:127549368-127552639	3	+	127549368	127552639	789624	3	8,82,180,	0,120,3091,
#Deleted in new
chr10	127734561	127736996	chr10:127734561-127736996	3	-	127734561	127734561	8553170	1	2435,	0,
#Deleted in new
chr10	127737234	127741186	chr10:127737234-127741186	3	+	127737273	127738965	789624	2	550,2667,	0,1285,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	127867880	127868487	chr10:127867880-127868487	7	+	127867880	127867880	16724991	1	607,	0,
#Partially deleted in new
chr10	127877840	127892947	chr10:127877840-127892947	3	-	127878148	127892784	789624	3	580,180,392,	0,5855,14715,
#Partially deleted in new
chr10	127907060	128085855	chr10:127907060-128085855	3	+	128040881	128082906	0	21	249,23,116,100,74,137,91,77,37,98,120,164,136,150,94,77,135,126,167,136,3024,	0,75213,133814,140329,140703,142469,149062,153878,154618,156022,159014,161062,162631,163240,163747,165077,166276,169542,170556,172499,175771,
#Partially deleted in new
chr10	127907151	128049666	chr10:127907151-128049666	0	+	128040881	128049666	789624	7	158,171,23,116,100,74,137,	0,57676,75122,133723,140238,140612,142378,
#Partially deleted in new
chr10	127929375	127934517	chr10:127929375-127934517	3	-	127929375	127929375	8553170	2	306,442,	0,4700,
#Deleted in new
chr10	127934697	127936167	chr10:127934697-127936167	3	+	127934697	127934697	8553170	2	167,204,	0,1266,
#Partially deleted in new
chr10	127987343	128056170	chr10:127987343-128056170	1	+	128040881	128056157	789624	6	52,116,100,74,132,48,	0,53531,60046,60420,62191,68779,
#Partially deleted in new
chr10	127998125	128056163	chr10:127998125-128056163	0	+	128040881	128056163	789624	6	1836,116,100,74,137,41,	0,42749,49264,49638,51404,57997,
#Partially deleted in new
chr10	128047405	128056171	chr10:128047405-128056171	0	+	128047405	128056157	789624	4	84,68,137,49,	0,364,2124,8717,
#Partially deleted in new
chr10	128047569	128085855	chr10:128047569-128085855	1	+	128047648	128082906	0	18	114,74,137,91,77,37,98,120,164,136,150,94,77,135,126,167,136,3024,	0,194,1960,8553,13369,14109,15513,18505,20553,22122,22731,23238,24568,25767,29033,30047,31990,35262,
#Deleted in new
chr10	128047618	128049635	chr10:128047618-128049635	0	+	128047618	128047618	8553170	2	219,106,	0,1911,
#Partially deleted in new
chr10	128047628	128070375	chr10:128047628-128070375	0	+	128047648	128061698	789624	10	55,74,137,91,37,98,120,164,136,75,	0,135,1901,8494,14050,15454,18446,20494,22063,22672,
#Partially deleted in new
chr10	128047630	128085855	chr10:128047630-128085855	0	+	128047648	128071299	789624	18	53,74,137,91,77,37,98,120,164,136,150,934,77,135,126,167,136,3024,	0,133,1899,8492,13308,14048,15452,18444,20492,22061,22670,23177,24507,25706,28972,29986,31929,35201,
#Deleted in new
chr10	128062918	128070841	chr10:128062918-128070841	0	+	128062918	128062918	8553170	6	262,120,164,136,150,34,	0,3156,5204,6773,7382,7889,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	128068381	128072682	chr10:128068381-128072682	0	+	128068381	128068381	8553170	2	2069,1875,	0,2426,
#Partially deleted in new
chr10	128096658	128126204	chr10:128096658-128126204	1	-	128099189	128125667	0	14	2597,444,6845,156,172,119,313,176,46,67,116,79,181,106,	0,4599,5920,13719,14986,15268,15474,16768,19832,22594,26222,26432,28917,29440,
#Partially deleted in new
chr10	128096658	128126385	chr10:128096658-128126385	3	-	128099189	128125667	0	15	2597,444,6845,156,172,119,313,176,1080,46,67,116,79,181,287,	0,4599,5920,13719,14986,15268,15474,16768,18269,19832,22594,26222,26432,28917,29440,
#Deleted in new
chr10	128101483	128103128	chr10:128101483-128103128	0	-	128101483	128101483	8553170	2	142,550,	0,1095,
#Deleted in new
chr10	128111519	128112449	chr10:128111519-128112449	0	-	128111519	128111519	8553170	3	297,119,317,	0,407,613,
#Partially deleted in new
chr10	128115509	128126235	chr10:128115509-128126235	0	-	128115509	128115509	8553170	4	498,46,67,43,	0,981,3743,10683,
#Partially deleted in new
chr10	128181031	128306183	chr10:128181031-128306183	0	+	128181031	128181031	8553170	4	125,74,191,143,	0,104920,106291,125009,
#Partially deleted in new
chr10	128181135	128317726	chr10:128181135-128317726	3	+	128181135	128181135	789624	7	77,74,191,1482,169,289,804,	0,104816,106187,124905,133293,134057,135787,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	128316281	128320214	chr10:128316281-128320214	3	-	128316281	128316281	8553170	2	93,253,	0,3680,
#Deleted in new
chr10	128912878	128916271	chr10:128912878-128916271	3	+	128912878	128912878	789624	5	39,33,138,165,75,	0,1494,1880,2122,3318,
#Deleted in new
chr10	128958771	128960062	chr10:128958771-128960062	3	-	128958771	128958771	8553170	3	220,67,88,	0,840,1203,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	129278250	129291722	chr10:129278250-129291722	3	+	129278250	129278250	8553170	2	83,392,	0,13080,
#Partially deleted in new
chr10	129372193	129380753	chr10:129372193-129380753	3	-	129372193	129372193	8553170	3	931,225,111,	0,6554,8449,
#Partially deleted in new
chr10	129467183	129768007	chr10:129467183-129768007	3	+	129467215	129766997	789624	5	113,137,149,140,1220,	0,69057,240711,292018,299604,
#Partially deleted in new
chr10	129467228	129564162	chr10:129467228-129564162	0	+	129467228	129467228	8553170	3	68,137,384,	0,69012,96550,
#Partially deleted in new
chr10	129467261	129537164	chr10:129467261-129537164	0	+	129467261	129467261	8553170	2	35,924,	0,68979,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	129693721	129701182	chr10:129693721-129701182	0	-	129693721	129693721	8553170	2	178,304,	0,7157,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	129693788	129701178	chr10:129693788-129701178	0	-	129693788	129693788	8553170	3	111,197,300,	0,330,7090,
#Deleted in new
chr10	129700147	129701262	chr10:129700147-129701262	0	-	129700147	129700147	8553170	2	617,384,	0,731,
#Deleted in new
chr10	129700257	129701262	chr10:129700257-129701262	0	-	129700257	129700257	8553170	2	403,500,	0,505,
#Deleted in new
chr10	129700468	129702117	chr10:129700468-129702117	3	-	129700468	129700468	8553170	1	1649,	0,
#Deleted in new
chr10	129700715	129701546	chr10:129700715-129701546	1	-	129700715	129700715	8553170	3	49,135,417,	0,163,414,
#Partially deleted in new
chr10	129701626	129717867	chr10:129701626-129717867	0	+	129701626	129701626	8553170	4	286,149,85,256,	0,6268,13893,15985,
#Deleted in new
chr10	129768843	129769435	chr10:129768843-129769435	3	+	129768843	129768843	8553170	2	234,261,	0,331,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr10	129784982	129806971	chr10:129784982-129806971	3	+	129784982	129784982	8553170	7	324,126,187,119,102,92,55,	0,6926,14683,16611,17807,20358,21934,
#Partially deleted in new
chr10	129835282	129963841	chr10:129835282-129963841	3	-	129837928	129963768	0	16	2678,90,189,178,66,89,127,131,118,82,69,74,56,64,157,207,	0,4962,5561,6833,7854,13109,31858,32499,38196,42485,121975,123651,126888,127659,128084,128352,
#Partially deleted in new
chr10	129836799	129963841	chr10:129836799-129963841	1	-	129837928	129963768	0	16	1161,198,189,178,66,89,127,131,145,82,69,74,56,64,157,207,	0,3445,4044,5316,6337,11592,30341,30982,36652,40968,120458,122134,125371,126142,126567,126835,
#Deleted in new
chr10	129837504	129837794	chr10:129837504-129837794	3	+	129837504	129837504	8553170	1	290,	0,
#Deleted in new
chr10	129837699	129842171	chr10:129837699-129842171	0	-	129837942	129842171	789624	5	261,113,198,189,56,	0,1383,2545,3144,4416,
#Deleted in new
chr10	129843298	129843374	chr10:129843298-129843374	3	-	129843298	129843298	5263520	1	76,	0,
#Deleted in new
chr10	129845327	129845895	chr10:129845327-129845895	3	+	129845327	129845327	8553170	1	568,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	130020024	130110810	chr10:130020024-130110810	0	-	130023876	130110772	789624	6	1954,156,113,63,165,107,	0,3709,15833,59541,59712,90679,
#Partially deleted in new
chr10	130063899	130110817	chr10:130063899-130110817	3	-	130064353	130110772	789624	4	484,63,165,114,	0,15666,15837,46804,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr10	130064339	130110802	chr10:130064339-130110802	0	-	130104176	130110772	789624	8	44,1244,333,63,165,118,148,99,	0,522,3936,15226,15397,36754,39743,46364,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	130066373	130110817	chr10:130066373-130110817	0	-	130104176	130110772	789624	6	2235,63,165,118,148,114,	0,13192,13363,34720,37709,44330,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	130104568	130104998	chr10:130104568-130104998	3	-	130104568	130104568	8553170	1	430,	0,
#Partially deleted in new
chr10	130106045	130108481	chr10:130106045-130108481	7	+	130106045	130106045	16724991	1	2436,	0,
#Partially deleted in new
chr10	130131769	130132241	chr10:130131769-130132241	7	-	130131769	130131769	16724991	1	472,	0,
#Partially deleted in new
chr10	130136398	130179664	chr10:130136398-130179664	1	+	130136420	130179392	0	11	114,109,75,202,173,62,58,53,40,93,323,	0,8812,23596,24397,30108,30520,33034,35185,38468,38598,42943,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	130136398	130182881	chr10:130136398-130182881	3	+	130136420	130179392	0	12	114,109,75,202,173,62,58,53,40,93,79,2769,	0,8812,23596,24397,30108,30520,33034,35185,38468,38598,42943,43714,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr10	130136398	130184521	chr10:130136398-130184521	0	+	130136420	130179392	0	13	114,109,75,202,173,62,58,53,40,93,79,209,654,	0,8812,23596,24397,30108,30520,33034,35185,38468,38598,42943,43714,47469,
#Deleted in new
chr10	130159745	130160873	chr10:130159745-130160873	0	+	130159745	130159745	8553170	3	89,75,78,	0,249,1050,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	130179373	130180382	chr10:130179373-130180382	0	+	130179373	130179373	8553170	2	47,270,	0,739,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	130180184	130183643	chr10:130180184-130183643	0	+	130180184	130180184	8553170	2	137,359,	0,3100,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	130213487	130216381	chr10:130213487-130216381	1	+	130213487	130213487	8553170	2	542,400,	0,2494,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	130213526	130483193	chr10:130213526-130483193	3	+	130213526	130213526	8553170	2	503,313,	0,269354,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	130282444	130286604	chr10:130282444-130286604	7	-	130282444	130282444	16724991	3	1833,97,125,	0,3696,4035,
#Partially deleted in new
chr10	130439066	130483154	chr10:130439066-130483154	0	+	130439066	130439066	8553170	2	23,274,	0,43814,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	130505105	130505201	chr10:130505105-130505201	3	+	130505105	130505105	8553170	1	96,	0,
#Deleted in new
chr10	130962587	130962668	chr10:130962587-130962668	3	-	130962587	130962587	5263520	1	81,	0,
#Partially deleted in new
chr10	131092390	131311721	chr10:131092390-131311721	3	-	131093161	131311635	789624	12	928,119,90,136,70,155,89,89,186,181,147,428,	0,5915,11874,24408,41988,54115,70731,74406,167868,215820,216762,218903,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr10	131092390	131260336	chr10:131092390-131260336	0	-	131092390	131092390	8553170	12	928,119,90,136,70,155,270,2252,89,118,89,78,	0,5915,11874,24408,41988,54115,63629,68341,70731,71611,74406,167868,
#Deleted in new
chr10	131095217	131095777	chr10:131095217-131095777	3	+	131095217	131095217	789624	2	82,390,	0,170,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	131772397	131790199	chr10:131772397-131790199	3	-	131772397	131772397	789624	5	1290,349,1412,210,123,	0,1459,2486,17259,17679,
#Deleted in new
chr10	131831909	131833508	chr10:131831909-131833508	3	-	131831909	131831909	8553170	1	1599,	0,
#Partially deleted in new
chr10	131891639	131895297	chr10:131891639-131895297	3	+	131891639	131891639	8553170	2	1350,185,	0,3473,
#Partially deleted in new
chr10	131900643	131959834	chr10:131900643-131959834	3	+	131901148	131955963	789624	9	512,93,98,166,113,178,165,262,4151,	0,594,33814,39387,39938,43324,44651,46886,55040,
#Partially deleted in new
chr10	131901030	131956555	chr10:131901030-131956555	0	+	131901148	131934929	789624	10	125,93,98,113,166,113,51,165,262,872,	0,207,33427,33863,39000,39551,43064,44264,46499,54653,
#Partially deleted in new
chr10	131901265	131956555	chr10:131901265-131956555	0	+	131901265	131944103	789624	8	65,98,166,113,51,165,262,872,	0,33192,38765,39316,42829,44029,46264,54418,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	131901290	131959827	chr10:131901290-131959827	0	+	131901290	131911695	789624	9	40,1037,98,166,113,178,165,262,4144,	0,10271,33167,38740,39291,42677,44004,46239,54393,
#Partially deleted in new
chr10	131939775	131944006	chr10:131939775-131944006	0	+	131939775	131939775	8553170	3	421,113,39,	0,806,4192,
#Partially deleted in new
chr10	131940158	131956242	chr10:131940158-131956242	0	+	131940158	131940158	8553170	6	38,260,178,165,262,559,	0,423,3809,5136,7371,15525,
#Partially deleted in new
chr10	131940162	131957483	chr10:131940162-131957483	0	+	131940162	131944103	8553170	7	34,113,30,51,165,262,1800,	0,419,3805,3932,5132,7367,15521,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	131940606	131945925	chr10:131940606-131945925	0	+	131940606	131940606	8553170	3	88,51,631,	0,3488,4688,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	131966454	131982013	chr10:131966454-131982013	3	-	131968523	131982001	0	6	2115,150,107,85,151,253,	0,4183,4409,6579,7338,15306,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	131968227	131981923	chr10:131968227-131981923	0	-	131970633	131981923	789624	5	2560,107,85,151,163,	0,2636,4806,5565,13533,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	131969649	131981967	chr10:131969649-131981967	0	-	131969980	131981967	789624	6	362,150,107,85,151,207,	0,988,1214,3384,4143,12111,
#Deleted in new
chr10	131971201	131971533	chr10:131971201-131971533	3	+	131971201	131971201	8553170	1	332,	0,
#Partially deleted in new
chr10	131973396	131981965	chr10:131973396-131981965	0	-	131973396	131973396	8553170	2	547,205,	0,8364,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	131980239	131981337	chr10:131980239-131981337	3	+	131980239	131980239	8553170	1	1098,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr10	131996737	131999846	chr10:131996737-131999846	3	+	131996737	131996737	8553170	1	3109,	0,
#Partially deleted in new
chr10	132104670	132184809	chr10:132104670-132184809	3	+	132104808	132167033	789624	24	273,498,216,120,147,132,36,60,129,129,84,63,99,99,54,66,69,78,204,66,73,1081,397,2453,	0,12406,28641,30370,31259,32348,32583,33448,35780,37249,40436,40847,43281,44741,45311,48287,49088,49242,58538,59999,62312,63282,65185,77686,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	132143715	132184809	chr10:132143715-132184809	0	+	132143715	132143715	8553170	14	982,84,63,99,99,54,66,69,78,204,66,42,1081,2453,	0,1391,1802,4236,5696,6266,9242,10043,10197,19493,20954,23298,24237,38641,
#Deleted in new
chr10	132181224	132184999	chr10:132181224-132184999	3	-	132181224	132181224	8553170	3	320,126,35,	0,2972,3740,
#Deleted in new
chr10	132184073	132185962	chr10:132184073-132185962	1	-	132184073	132184073	8553170	3	249,89,140,	0,891,1749,
#Deleted in new
chr10	132186899	132205776	chr10:132186899-132205776	3	+	132187063	132204930	0	14	203,89,185,165,62,81,69,121,157,142,171,180,166,938,	0,3847,5758,7945,9961,10121,11515,11951,13456,13942,15046,15746,16862,17939,
#Deleted in new
chr10	132186977	132192832	chr10:132186977-132192832	0	+	132186977	132186977	8553170	4	125,89,238,175,	0,3769,5305,5680,
#Deleted in new
chr10	132187058	132196893	chr10:132187058-132196893	0	+	132187058	132187058	8553170	6	44,89,152,185,165,33,	0,3688,5310,5599,7786,9802,
#Deleted in new
chr10	132192759	132205235	chr10:132192759-132205235	1	+	132192760	132204930	789624	10	83,165,62,81,121,157,142,171,166,397,	0,2085,4101,4261,6091,7596,8082,9186,11002,12079,
#Deleted in new
chr10	132203552	132204907	chr10:132203552-132204907	0	+	132203552	132203552	8553170	2	375,69,	0,1286,
#Partially deleted in new
chr10	132207491	132307940	chr10:132207491-132307940	3	-	132208009	132307833	789624	12	660,68,132,126,117,104,90,38,174,152,56,369,	0,1542,15149,15369,16915,17741,18035,18255,19303,20485,38408,100080,
#Partially deleted in new
chr10	132207491	132307214	chr10:132207491-132307214	1	-	132208009	132228095	789624	12	660,68,132,126,117,104,90,38,174,152,56,293,	0,1542,15149,15369,16915,17741,18035,18255,19303,20485,38408,99430,
#Partially deleted in new
chr10	132207491	132249108	chr10:132207491-132249108	0	-	132207491	132207491	789624	13	660,68,70,132,126,117,104,90,38,174,152,56,79,	0,1542,1803,15149,15369,16915,17741,18035,18255,19303,20485,38408,41538,
#Partially deleted in new
chr10	132226819	132331847	chr10:132226819-132331847	0	-	132226819	132331736	789624	4	149,213,56,412,	0,1157,19080,104616,
#Partially deleted in new
chr10	132324036	132331831	chr10:132324036-132331831	0	-	132324233	132331736	789624	2	337,396,	0,7399,
#Partially deleted in new
chr10	132330280	132331837	chr10:132330280-132331837	1	-	132330477	132331736	789624	2	205,402,	0,1155,
#Partially deleted in new
chr10	132332153	132353395	chr10:132332153-132353395	1	+	132333524	132351737	789624	9	103,258,131,59,153,373,95,147,490,	0,1323,5411,10059,12344,15830,16809,19453,20752,
#Partially deleted in new
chr10	132332154	132353396	chr10:132332154-132353396	1	+	132333524	132352960	789624	8	102,258,131,59,153,373,147,515,	0,1322,5410,10058,12343,15829,19452,20727,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr10	132332199	132379918	chr10:132332199-132379918	3	+	132333524	132375242	789624	11	57,258,131,59,153,373,147,97,119,127,4853,	0,1277,5365,10013,12298,15784,19407,23590,29257,33224,42866,
#Partially deleted in new
chr10	132332225	132375457	chr10:132332225-132375457	0	+	132332225	132332225	8553170	12	31,258,131,153,373,95,147,97,119,127,379,392,	0,1251,5339,12272,15758,16737,19381,23564,29231,33198,34073,42840,
#Partially deleted in new
chr10	132332278	132375456	chr10:132332278-132375456	1	+	132333524	132375242	789624	11	258,258,131,59,153,373,147,97,119,127,391,	0,1198,5286,9934,12219,15705,19328,23511,29178,33145,42787,
#Partially deleted in new
chr10	132336763	132348349	chr10:132336763-132348349	0	+	132336763	132336763	8553170	5	65,131,59,153,366,	0,801,5449,7734,11220,
#Partially deleted in new
chr10	132337137	132348092	chr10:132337137-132348092	0	+	132337137	132337137	8553170	5	284,131,59,153,109,	0,427,5075,7360,10846,
#Partially deleted in new
chr10	132337665	132344867	chr10:132337665-132344867	0	+	132337665	132337665	8553170	3	30,59,370,	0,4547,6832,
#Partially deleted in new
chr10	132348191	132361589	chr10:132348191-132361589	0	+	132348191	132348191	8553170	4	165,95,147,133,	0,771,3415,13265,
#Partially deleted in new
chr10	132350399	132376028	chr10:132350399-132376028	0	+	132350399	132350399	8553170	5	1354,97,119,127,963,	0,5390,11057,15024,24666,
#Partially deleted in new
chr10	132351606	132367001	chr10:132351606-132367001	0	+	132351606	132351606	8553170	5	147,97,119,127,156,	0,4183,9850,13817,15239,
#Partially deleted in new
chr10	132365470	132367001	chr10:132365470-132367001	0	+	132365470	132365470	8553170	3	80,63,156,	0,1144,1375,
#Partially deleted in new
chr10	132365480	132366843	chr10:132365480-132366843	0	+	132365480	132365480	8553170	2	70,409,	0,954,
#Deleted in new
chr10	132397167	132417863	chr10:132397167-132417863	3	+	132397226	132406273	0	3	184,1664,803,	0,7458,19893,
#Deleted in new
chr10	132397167	132417528	chr10:132397167-132417528	1	+	132397226	132417074	0	3	184,1361,468,	0,7458,19893,
#Deleted in new
chr10	132419082	132420953	chr10:132419082-132420953	3	+	132419082	132419082	8553170	2	101,196,	0,1675,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	132433732	132441484	chr10:132433732-132441484	3	-	132433732	132433732	8553170	2	959,54,	0,7698,
#Deleted in new
chr10	132444326	132447920	chr10:132444326-132447920	1	+	132444326	132444326	8553170	3	194,84,184,	0,1369,3410,
#Deleted in new
chr10	132445188	132449386	chr10:132445188-132449386	1	+	132445188	132445188	8553170	4	90,84,700,383,	0,507,2548,3815,
#Deleted in new
chr10	132445188	132449408	chr10:132445188-132449408	3	+	132445188	132445188	8553170	3	90,84,1672,	0,507,2548,
#Partially deleted in new
chr10	132511625	132518191	chr10:132511625-132518191	3	-	132511625	132511625	8553170	2	536,98,	0,6468,
#Deleted in new
chr10	132520826	132522449	chr10:132520826-132522449	3	-	132520826	132520826	8553170	1	1623,	0,
#Partially deleted in new
chr10	132537819	132783480	chr10:132537819-132783480	3	+	132538096	132781941	789624	16	352,42,101,88,64,104,53,120,85,96,75,74,112,69,88,1444,	0,70095,108048,112598,152572,159996,170493,172517,189001,211697,211951,227953,239851,243029,244041,244217,
#Partially deleted in new
chr10	132537848	132777877	chr10:132537848-132777877	1	+	132538096	132777857	789624	13	323,42,101,88,64,104,53,120,85,96,75,74,207,	0,70066,108019,112569,152543,159967,170464,172488,188972,211668,211922,227924,239822,
#Partially deleted in new
chr10	132538138	132710456	chr10:132538138-132710456	0	+	132538138	132710456	789624	6	33,42,64,104,53,120,	0,69776,152253,159677,170174,172198,
#Partially deleted in new
chr10	132607925	132777782	chr10:132607925-132777782	0	+	132607925	132777782	789624	10	31,101,88,64,104,53,120,85,74,112,	0,37942,42492,82466,89890,100387,102411,118895,157847,169745,
#Partially deleted in new
chr10	132690391	132727349	chr10:132690391-132727349	0	+	132690391	132690391	8553170	5	64,104,53,120,529,	0,7424,17921,19945,36429,
#Partially deleted in new
chr10	132710347	132753972	chr10:132710347-132753972	0	+	132710347	132710347	8553170	5	109,85,96,75,200,	0,16473,39169,39423,43425,
#Partially deleted in new
chr10	132765823	132782405	chr10:132765823-132782405	0	+	132765823	132782110	789624	5	23,112,69,37,369,	0,11847,15025,16037,16213,
#Deleted in new
chr10	132783178	132784765	chr10:132783178-132784765	0	-	132783178	132783178	8553170	2	271,204,	0,1383,
#Deleted in new
chr10	132783180	132786052	chr10:132783180-132786052	3	-	132784915	132785948	789624	3	1990,173,510,	0,2099,2362,
#Partially deleted in new
chr10	132808391	132942585	chr10:132808391-132942585	3	-	132808420	132942484	789624	58	513,81,82,113,103,36,61,71,168,83,122,131,77,98,171,180,135,189,189,199,177,107,201,147,133,99,149,150,207,206,172,184,139,85,163,132,167,108,150,166,213,134,128,128,124,121,229,191,99,100,111,95,124,165,65,132,125,150,	0,2017,2558,4393,5760,6185,6294,6452,24966,25649,26262,26912,27750,28425,37665,38540,38795,41852,42725,49198,50679,52025,52390,57633,58983,60882,64284,68420,69489,71034,72469,76711,77429,83941,90567,91143,100076,100745,101527,104263,104654,108157,110001,110923,111667,113712,114088,116304,118176,121313,126360,128569,129160,130197,132604,133199,133588,134044,
#Deleted in new
chr10	132808442	132812804	chr10:132808442-132812804	0	-	132808791	132812804	789624	5	462,81,137,82,20,	0,1966,2142,2507,4342,
#Partially deleted in new
chr10	132832615	132835353	chr10:132832615-132835353	0	-	132832764	132835353	789624	5	187,168,83,122,50,	0,742,1425,2038,2688,
#Deleted in new
chr10	132834681	132837077	chr10:132834681-132837077	0	-	132834681	132834681	8553170	4	94,131,77,261,	0,622,1460,2135,
#Deleted in new
chr10	132872527	132876908	chr10:132872527-132876908	0	-	132872527	132872527	8553170	2	297,97,	0,4284,
#Partially deleted in new
chr10	132898516	132916682	chr10:132898516-132916682	0	-	132898516	132898516	8553170	8	605,132,167,108,150,166,213,134,	0,1018,9951,10620,11402,14138,14529,18032,
#Deleted in new
chr10	132908347	132910096	chr10:132908347-132910096	0	-	132908347	132908347	8553170	3	287,108,178,	0,789,1571,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr10	132929184	132942823	chr10:132929184-132942823	1	-	132929452	132942484	789624	9	620,111,95,124,165,65,132,125,388,	0,5567,7776,8367,9404,11811,12406,12795,13251,
#Partially deleted in new
chr10	132937114	132942543	chr10:132937114-132942543	0	-	132937114	132937114	8553170	6	561,165,65,132,125,108,	0,1474,3881,4476,4865,5321,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	132943966	132965289	chr10:132943966-132965289	3	-	132943966	132943966	789624	2	2515,104,	0,21219,
#Deleted in new
chr10	132961339	132962237	chr10:132961339-132962237	3	-	132961339	132961339	789624	2	125,479,	0,419,
#Partially deleted in new
chr10	132965533	132976354	chr10:132965533-132976354	3	+	132965533	132965533	789624	3	374,3757,1123,	0,5565,9698,
#Partially deleted in new
chr10	133070928	133131675	chr10:133070928-133131675	1	+	133070928	133129511	789624	16	222,142,371,100,270,157,112,225,174,260,130,128,124,146,96,3347,	0,1031,1898,9358,10760,11587,11818,13880,17948,22070,24722,26045,27711,31768,56304,57400,
#Deleted in new
chr10	133083072	133086697	chr10:133083072-133086697	3	-	133083072	133083072	789624	3	2321,116,209,	0,2458,3416,
#Deleted in new
chr10	133085255	133088491	chr10:133085255-133088491	1	-	133085255	133085255	8553170	1	3236,	0,
#Partially deleted in new
chr10	133087904	133131675	chr10:133087904-133131675	3	+	133088909	133129511	789624	7	234,205,128,124,146,99,3347,	0,803,9069,10735,14792,39328,40424,
#Partially deleted in new
chr10	133102245	133131428	chr10:133102245-133131428	1	+	133102732	133129511	789624	4	93,146,99,3100,	0,451,24987,26083,
#Deleted in new
chr10	133144611	133145304	chr10:133144611-133145304	7	-	133144611	133144611	16724991	1	693,	0,
#Partially deleted in new
chr10	133160446	133226412	chr10:133160446-133226412	3	+	133160467	133224890	789624	30	123,199,59,147,118,701,115,72,62,159,78,94,163,689,145,86,398,94,98,215,114,148,180,207,83,151,123,60,158,1754,	0,6934,7807,22897,23425,25527,28092,29151,29305,35216,36611,37228,37890,38131,39011,39928,41054,46238,46409,46690,50164,50975,51232,52269,53198,53525,58384,58584,59508,64212,
#Partially deleted in new
chr10	133160502	133174244	chr10:133160502-133174244	0	+	133160502	133160502	8553170	4	67,199,59,314,	0,6878,7751,13428,
#Partially deleted in new
chr10	133160502	133179374	chr10:133160502-133179374	0	+	133160502	133160502	8553170	4	67,199,59,113,	0,6878,7751,18759,
#Partially deleted in new
chr10	133164186	133179149	chr10:133164186-133179149	0	+	133164186	133164186	8553170	4	70,199,59,315,	0,3194,4067,14648,
#Partially deleted in new
chr10	133167183	133207204	chr10:133167183-133207204	1	+	133167473	133206995	789624	18	396,59,147,118,701,115,72,62,159,78,94,163,689,145,86,398,94,349,	0,1070,16160,16688,18790,21355,22414,22568,28479,29874,30491,31153,31394,32274,33191,34317,39501,39672,
#Deleted in new
chr10	133230273	133231558	chr10:133230273-133231558	3	+	133230288	133231442	789624	2	565,592,	0,693,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	133237403	133241929	chr10:133237403-133241929	3	+	133237914	133240306	789624	3	752,161,1998,	0,2272,2528,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	133246477	133247891	chr10:133246477-133247891	3	-	133246477	133246477	789624	2	573,101,	0,1313,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	133246909	133247885	chr10:133246909-133247885	1	-	133246909	133246909	789624	3	141,148,95,	0,644,881,
#Deleted in new
chr10	133247510	133247620	chr10:133247510-133247620	3	-	133247510	133247510	5263520	1	110,	0,
#Deleted in new
chr10	133257143	133257551	chr10:133257143-133257551	3	-	133257143	133257143	8553170	1	408,	0,
#Partially deleted in new
chr10	133262402	133276868	chr10:133262402-133276868	3	-	133263155	133276817	0	23	831,78,66,190,115,85,78,151,70,190,90,178,149,82,170,69,63,190,77,79,77,104,97,	0,1285,4949,5526,6345,7042,7494,7957,8333,8478,8797,9125,9403,9790,10013,10395,10554,10851,11359,11548,11756,13081,14369,
#Partially deleted in new
chr10	133262419	133276850	chr10:133262419-133276850	1	-	133263688	133276817	0	22	814,78,66,138,85,78,151,70,190,90,178,149,82,170,69,63,190,77,79,77,104,79,	0,1268,4932,5509,7025,7477,7940,8316,8461,8780,9108,9386,9773,9996,10378,10537,10834,11342,11531,11739,13064,14352,
#Partially deleted in new
chr10	133262967	133276868	chr10:133262967-133276868	1	-	133263155	133276817	0	20	266,66,190,115,85,151,70,190,90,178,149,82,170,69,63,177,77,79,77,97,	0,4384,4961,5780,6477,7392,7768,7913,8232,8560,8838,9225,9448,9830,9989,10286,10794,10983,11191,13804,
#Deleted in new
chr10	133263002	133263865	chr10:133263002-133263865	0	-	133263002	133263002	8553170	2	231,178,	0,685,
#Deleted in new
chr10	133270452	133271425	chr10:133270452-133271425	0	-	133270452	133270452	8553170	3	58,329,226,	0,283,747,
#Deleted in new
chr10	133271716	133272576	chr10:133271716-133272576	0	-	133271716	133271716	8553170	3	238,82,161,	0,476,699,
#Deleted in new
chr10	133271813	133275994	chr10:133271813-133275994	0	-	133271813	133271813	8553170	10	461,170,69,63,190,77,79,77,104,289,	0,602,984,1143,1440,1948,2137,2345,3670,3892,
#Deleted in new
chr10	133272414	133276863	chr10:133272414-133276863	0	-	133273392	133276817	789624	8	171,69,63,190,77,79,77,92,	0,383,542,839,1347,1536,1744,4357,
#Deleted in new
chr10	133272737	133276856	chr10:133272737-133276856	0	-	133272737	133272737	8553170	7	129,63,585,79,77,104,85,	0,219,516,1213,1421,2746,4034,
#Deleted in new
chr10	133273285	133276857	chr10:133273285-133276857	0	-	133273285	133276817	789624	7	158,77,79,77,195,104,86,	0,476,665,873,1510,2198,3486,
#Deleted in new
chr10	133273304	133276868	chr10:133273304-133276868	0	-	133273304	133273304	8553170	6	126,77,79,77,104,97,	0,457,646,854,2179,3467,
#Partially deleted in new
chr10	133278629	133302981	chr10:133278629-133302981	1	-	133279765	133302941	789624	17	1272,164,120,144,121,129,173,181,181,146,190,200,208,160,177,129,190,	0,2643,3593,4448,5252,6455,6826,9499,10210,11194,13869,14409,14932,19322,20797,21355,24162,
#Partially deleted in new
chr10	133278629	133309156	chr10:133278629-133309156	3	-	133279765	133302941	789624	18	1272,164,120,144,121,129,173,181,181,146,190,200,208,160,177,129,189,334,	0,2643,3593,4448,5252,6455,6826,9499,10210,11194,13869,14409,14932,19322,20797,21355,24162,30193,
#Partially deleted in new
chr10	133278629	133309156	chr10:133278629-133309156	1	-	133279765	133299492	789624	17	1272,164,120,144,121,129,173,181,181,146,190,200,208,160,177,129,334,	0,2643,3593,4448,5252,6455,6826,9499,10210,11194,13869,14409,14932,19322,20797,21355,30193,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr10	133278629	133309156	chr10:133278629-133309156	1	-	133279765	133302941	789624	19	1272,164,120,144,121,129,173,181,181,146,190,200,208,84,160,177,129,189,334,	0,2643,3593,4448,5252,6455,6826,9499,10210,11194,13869,14409,14932,18691,19322,20797,21355,24162,30193,
#Deleted in new
chr10	133279639	133281522	chr10:133279639-133281522	0	-	133279639	133279639	8553170	2	262,250,	0,1633,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr10	133279640	133291034	chr10:133279640-133291034	1	-	133279765	133289962	789624	10	261,164,120,144,121,129,173,181,181,1211,	0,1632,2582,3437,4241,5444,5815,8488,9199,10183,
#Partially deleted in new
chr10	133279641	133312337	chr10:133279641-133312337	0	-	133283163	133302941	789624	18	260,164,120,107,121,129,173,181,181,146,190,200,208,160,177,129,189,718,	0,1631,2581,3436,4240,5443,5814,8487,9198,10182,12857,13397,13920,18310,19785,20343,23150,31978,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	133297986	133308860	chr10:133297986-133308860	0	-	133300460	133302941	789624	5	125,177,563,189,38,	0,1440,1998,4805,10836,
#Partially deleted in new
chr10	133299434	133309134	chr10:133299434-133309134	0	-	133299434	133299434	8553170	4	169,129,189,312,	0,550,3357,9388,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	133301700	133308848	chr10:133301700-133308848	0	-	133301700	133301700	8553170	2	1280,26,	0,7122,
#Partially deleted in new
chr10	133308474	133313158	chr10:133308474-133313158	3	+	133308943	133312866	789624	6	622,74,202,125,126,371,	0,915,1301,1689,3241,4313,
#Partially deleted in new
chr10	133308940	133313162	chr10:133308940-133313162	1	+	133308943	133311950	789624	5	156,74,202,125,1447,	0,449,835,1223,2775,
#Deleted in new
chr10	133308948	133310546	chr10:133308948-133310546	0	+	133308948	133308948	8553170	4	148,74,202,383,	0,441,827,1215,
#Partially deleted in new
chr10	133309409	133352529	chr10:133309409-133352529	3	+	133309409	133352440	789624	8	54,202,125,126,67,53,134,283,	0,366,754,2306,40685,41971,42597,42837,
#Partially deleted in new
chr10	133309439	133313117	chr10:133309439-133313117	0	+	133309439	133309439	8553170	4	24,125,126,330,	0,724,2276,3348,
#Partially deleted in new
chr10	133324071	133336907	chr10:133324071-133336907	3	-	133325826	133328989	789624	6	1495,322,114,111,155,74,	0,1727,2806,3833,4783,12762,
#Deleted in new
chr10	133325427	133326175	chr10:133325427-133326175	0	-	133325427	133325427	8553170	2	139,416,	0,332,
#Deleted in new
chr10	133325427	133326314	chr10:133325427-133326314	0	-	133325427	133325427	8553170	2	139,516,	0,371,
#Partially deleted in new
chr10	133325931	133336935	chr10:133325931-133336935	1	-	133326265	133328989	789624	5	349,114,111,149,102,	0,946,1973,2923,10902,
#Partially deleted in new
chr10	133327426	133336872	chr10:133327426-133336872	1	-	133327673	133328989	789624	3	589,155,39,	0,1428,9407,
#Partially deleted in new
chr10	133344642	133344906	chr10:133344642-133344906	7	-	133344642	133344642	16724991	1	264,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr10	133345753	133350726	chr10:133345753-133350726	3	-	133345753	133345753	8553170	2	44,140,	0,4833,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	133347145	133352683	chr10:133347145-133352683	3	+	133347417	133352440	789624	5	280,67,53,134,437,	0,2949,4235,4861,5101,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr10	133347367	133352548	chr10:133347367-133352548	1	+	133347417	133352440	789624	5	58,67,53,107,302,	0,2727,4013,4639,4879,
#Deleted in new
chr10	133355153	133358035	chr10:133355153-133358035	3	-	133355369	133358007	789624	6	283,74,99,71,69,113,	0,584,1486,1789,2033,2769,
#Deleted in new
chr10	133355159	133358025	chr10:133355159-133358025	1	-	133355498	133358007	789624	6	346,74,99,71,69,103,	0,578,1480,1783,2027,2763,
#Deleted in new
chr10	133355163	133357995	chr10:133355163-133357995	0	-	133355369	133357995	789624	5	273,74,99,71,73,	0,574,1476,1779,2759,
#Deleted in new
chr10	133355168	133358001	chr10:133355168-133358001	0	-	133355168	133355168	8553170	6	268,74,99,71,276,79,	0,569,1471,1774,2018,2754,
#Deleted in new
chr10	133355202	133357737	chr10:133355202-133357737	1	-	133355369	133357205	789624	6	234,74,99,71,69,81,	0,535,1437,1740,1984,2454,
#Deleted in new
chr10	133355519	133356996	chr10:133355519-133356996	0	-	133355519	133355519	8553170	3	292,99,54,	0,1120,1423,
#Partially deleted in new
chr10	133362479	133373689	chr10:133362479-133373689	3	-	133362867	133373333	0	8	454,68,120,105,100,128,198,444,	0,2178,3496,4409,6443,7424,8080,10766,
#Deleted in new
chr10	133371555	133371663	chr10:133371555-133371663	3	-	133371555	133371555	5263520	1	108,	0,
#Deleted in new
chr10	133374735	133374869	chr10:133374735-133374869	3	-	133374735	133374735	8553170	1	134,	0,
#Partially deleted in new
chr10	133379233	133391694	chr10:133379233-133391694	3	+	133379316	133391455	789624	7	264,487,200,253,113,158,383,	0,765,2226,4726,9722,10356,12078,
#Partially deleted in new
chr10	133379260	133391654	chr10:133379260-133391654	1	+	133379316	133391538	789624	6	237,487,200,253,113,343,	0,738,2199,4699,9695,12051,
#Partially deleted in new
chr10	133379286	133391624	chr10:133379286-133391624	0	+	133379316	133389065	789624	6	211,487,200,113,158,313,	0,712,2173,9669,10303,12025,
#Partially deleted in new
chr10	133379286	133391624	chr10:133379286-133391624	0	+	133379316	133381488	789624	7	211,200,88,253,113,158,313,	0,2173,3565,4673,9669,10303,12025,
#Partially deleted in new
chr10	133379286	133391624	chr10:133379286-133391624	1	+	133379316	133389065	789624	5	211,487,200,113,313,	0,712,2173,9669,12025,
#Partially deleted in new
chr10	133379286	133391624	chr10:133379286-133391624	0	+	133379316	133381488	789624	5	211,200,113,158,313,	0,2173,9669,10303,12025,
#Partially deleted in new
chr10	133379286	133391624	chr10:133379286-133391624	0	+	133379316	133381488	789624	4	211,200,113,313,	0,2173,9669,12025,
#Partially deleted in new
chr10	133379527	133391694	chr10:133379527-133391694	0	+	133379527	133379527	8553170	7	143,487,200,253,113,158,383,	0,471,1932,4432,9428,10062,11784,
#Deleted in new
chr10	133379538	133380373	chr10:133379538-133380373	0	+	133379538	133379538	8553170	2	223,375,	0,460,
#Partially deleted in new
chr10	133390833	133420495	chr10:133390833-133420495	3	+	133391088	133420165	789624	12	265,117,65,105,81,57,91,62,97,82,113,470,	0,478,4879,5329,7601,8336,8695,10695,11315,11858,28646,29192,
#Partially deleted in new
chr10	133391057	133391663	chr10:133391057-133391663	0	+	133391057	133391057	8553170	2	97,352,	0,254,
#Partially deleted in new
chr10	133394093	133420464	chr10:133394093-133420464	1	+	133395723	133420165	789624	11	91,65,105,81,57,91,62,97,82,113,439,	0,1619,2069,4341,5076,5435,7435,8055,8598,25386,25932,
#Partially deleted in new
chr10	133394170	133420670	chr10:133394170-133420670	3	+	133394220	133420165	789624	11	162,65,105,81,57,91,62,97,82,113,645,	0,1542,1992,4264,4999,5358,7358,7978,8521,25309,25855,
#Partially deleted in new
chr10	133394173	133420219	chr10:133394173-133420219	0	+	133394220	133420165	789624	9	159,65,105,81,57,97,82,113,194,	0,1539,1989,4261,4996,7975,8518,25306,25852,
#Partially deleted in new
chr10	133394195	133421307	chr10:133394195-133421307	0	+	133394195	133394195	8553170	10	137,65,105,81,57,91,717,82,113,1282,	0,1517,1967,4239,4974,5333,7333,8496,25284,25830,
#Partially deleted in new
chr10	133394213	133401847	chr10:133394213-133401847	0	+	133394213	133394213	8553170	7	119,65,105,81,57,125,319,	0,1499,1949,4221,4956,5315,7315,
#Partially deleted in new
chr10	133394223	133399804	chr10:133394223-133399804	0	+	133394223	133394223	8553170	6	109,65,105,81,57,276,	0,1489,1939,4211,4946,5305,
#Partially deleted in new
chr10	133394272	133420518	chr10:133394272-133420518	0	+	133394272	133394272	8553170	10	520,65,105,81,57,91,62,625,113,493,	0,1440,1890,4162,4897,5256,7256,7876,25207,25753,
#Partially deleted in new
chr10	133401422	133402839	chr10:133401422-133402839	0	+	133401422	133401422	8553170	3	168,97,148,	0,726,1269,
#Deleted in new
chr10	133420665	133424572	chr10:133420665-133424572	3	-	133423225	133423681	789624	2	3032,96,	0,3811,
#Deleted in new
chr10	133430393	133431318	chr10:133430393-133431318	7	-	133430393	133430393	16724991	1	925,	0,
#Partially deleted in new
chr10	133453927	133468449	chr10:133453927-133468449	0	+	133453927	133453927	5263520	10	137,318,2048,318,293,569,315,147,156,603,	0,2309,3351,5559,5950,10678,11323,12307,13270,13919,
#Partially deleted in new
chr10	133453945	133469183	chr10:133453945-133469183	0	+	133453945	133453945	8553170	11	119,318,1378,306,318,293,69,315,147,156,1337,	0,2291,3333,5075,5541,5932,11160,11305,12289,13252,13901,
#Partially deleted in new
chr10	133453945	133469183	chr10:133453945-133469183	3	+	133453997	133467968	789624	12	119,318,297,297,306,684,306,69,315,147,156,1337,	0,2291,3333,4414,5075,5541,10660,11160,11305,12289,13252,13901,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr10	133456236	133523558	chr10:133456236-133523558	0	+	133456236	133456236	8553170	14	318,1572,306,684,325,69,315,50,147,156,98,204,177,288,	0,848,2784,3250,8369,8869,9014,9638,9998,10961,34985,37050,41592,67034,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr10	133464231	133468991	chr10:133464231-133468991	0	+	133464231	133464231	8553170	3	2150,156,1145,	0,2966,3615,
#Deleted in new
chr10	133466973	133468412	chr10:133466973-133468412	0	+	133466973	133466973	8553170	2	380,566,	0,873,
#Deleted in new
chr10	133481237	133481770	chr10:133481237-133481770	7	+	133481237	133481237	16724991	1	533,	0,
#Partially deleted in new
chr10	133520405	133539122	chr10:133520405-133539122	3	+	133527395	133538964	0	11	155,78,216,160,150,161,177,142,188,142,343,	0,6390,6951,8075,11179,11718,12286,13350,16657,17345,18374,
#Deleted in new
chr10	133525543	133528563	chr10:133525543-133528563	0	+	133527395	133528563	789624	4	98,78,216,83,	0,1252,1813,2937,
#Deleted in new
chr10	133526258	133527513	chr10:133526258-133527513	3	-	133526258	133526258	8553170	1	1255,	0,
#Partially deleted in new
chr10	133527362	133539116	chr10:133527362-133539116	1	+	133527395	133538964	0	9	210,160,150,161,177,142,188,142,337,	0,1118,4222,4761,5329,6393,9700,10388,11417,
#Deleted in new
chr10	133527434	133532868	chr10:133527434-133532868	0	+	133527434	133527434	8553170	4	138,160,150,177,	0,1046,4150,5257,
#Partially deleted in new
chr10	133527496	133538811	chr10:133527496-133538811	0	+	133527496	133538811	789624	7	76,161,177,142,188,142,32,	0,4627,5195,6259,9566,10254,11283,
#Partially deleted in new
chr10	133527496	133538811	chr10:133527496-133538811	0	+	133527496	133538811	789624	8	76,150,161,177,142,188,142,32,	0,4088,4627,5195,6259,9566,10254,11283,
#Partially deleted in new
chr10	133527496	133538811	chr10:133527496-133538811	0	+	133527496	133531638	789624	6	76,150,157,188,142,32,	0,4088,5215,9566,10254,11283,
#Deleted in new
chr10	133528078	133532164	chr10:133528078-133532164	0	+	133528078	133528078	8553170	3	562,150,41,	0,3506,4045,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr10	133531575	133561220	chr10:133531575-133561220	0	+	133531575	133531575	8553170	6	709,177,142,188,142,6560,	0,1116,2180,5487,6175,23085,
#Deleted in new
chr10	133537499	133539118	chr10:133537499-133539118	0	+	133537499	133537499	8553170	2	393,339,	0,1280,
#Partially deleted in new
chr10	133553900	133568291	chr10:133553900-133568291	3	-	133554289	133560118	789624	13	428,88,111,124,67,64,90,55,48,75,60,63,104,	0,1450,1696,1879,2080,2858,3166,3963,4266,4976,5400,6190,14287,
#Partially deleted in new
chr10	133553900	133565583	chr10:133553900-133565583	0	-	133553900	133553900	8553170	11	428,88,111,124,67,64,90,55,48,1277,127,	0,1450,1696,1879,2080,2858,3166,3963,4266,4976,11556,
#Partially deleted in new
chr10	133554289	133565583	chr10:133554289-133565583	1	-	133554289	133565529	789624	13	39,88,111,124,67,64,90,55,48,75,60,63,127,	0,1061,1307,1490,1691,2469,2777,3574,3877,4587,5011,5801,11167,
#Partially deleted in new
chr10	133554989	133565584	chr10:133554989-133565584	1	-	133554991	133565529	789624	13	140,88,111,124,67,64,90,55,48,75,60,63,128,	0,361,607,790,991,1769,2077,2874,3177,3887,4311,5101,10467,
#Deleted in new
chr10	133567797	133569835	chr10:133567797-133569835	1	-	133568073	133568448	789624	2	686,568,	0,1470,
#Deleted in new
chr10	133575121	133576031	chr10:133575121-133576031	7	-	133575121	133575121	16724991	1	910,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr10	133623894	133626792	chr10:133623894-133626792	1	-	133625098	133626742	789624	4	1710,78,78,228,	0,2027,2334,2670,
#Deleted in new
chr10	133625098	133626795	chr10:133625098-133626795	3	-	133625098	133626742	789624	4	506,78,75,231,	0,823,1130,1466,
#Deleted in new
chr10	133637407	133637892	chr10:133637407-133637892	7	-	133637407	133637407	16724991	1	485,	0,
#Deleted in new
chr10	133640788	133642894	chr10:133640788-133642894	7	+	133640788	133640788	16724991	1	2106,	0,
#Deleted in new
chr10	133657234	133660635	chr10:133657234-133660635	7	-	133657234	133657234	16724991	8	82,77,108,93,93,103,145,73,	0,170,1159,1395,2130,2471,3087,3328,
#Deleted in new
chr10	133664428	133665106	chr10:133664428-133665106	7	+	133664428	133664428	16724991	1	678,	0,
#Deleted in new
chr10	133667150	133668419	chr10:133667150-133668419	7	+	133667150	133667150	16724991	1	1269,	0,
#Deleted in new
chr10	133670449	133671718	chr10:133670449-133671718	7	+	133670449	133670449	16724991	1	1269,	0,
#Deleted in new
chr10	133673748	133675017	chr10:133673748-133675017	7	+	133673748	133673748	16724991	1	1269,	0,
#Deleted in new
chr10	133677058	133678327	chr10:133677058-133678327	7	+	133677058	133677058	16724991	1	1269,	0,
#Deleted in new
chr10	133680368	133681637	chr10:133680368-133681637	7	+	133680368	133680368	16724991	1	1269,	0,
#Deleted in new
chr10	133683667	133684936	chr10:133683667-133684936	7	+	133683667	133683667	16724991	1	1269,	0,
#Deleted in new
chr10	133740605	133741284	chr10:133740605-133741284	7	+	133740605	133740605	16724991	1	679,	0,
#Deleted in new
chr10	133743331	133744598	chr10:133743331-133744598	7	+	133743331	133743331	16724991	1	1267,	0,
#Deleted in new
chr10	133746640	133747907	chr10:133746640-133747907	7	+	133746640	133746640	16724991	1	1267,	0,
#Deleted in new
chr10	133749949	133751216	chr10:133749949-133751216	7	+	133749949	133749949	16724991	1	1267,	0,
#Deleted in new
chr10	133753249	133754516	chr10:133753249-133754516	7	+	133753249	133753249	16724991	1	1267,	0,
#Deleted in new
chr10	133756558	133757825	chr10:133756558-133757825	7	+	133756558	133756558	16724991	1	1267,	0,
#Deleted in new
chr10	133759858	133761125	chr10:133759858-133761125	7	+	133759858	133759858	16724991	1	1267,	0,
#Partially deleted in new
chr10	133778245	133778699	chr10:133778245-133778699	7	+	133778245	133778245	16724991	1	454,	0,
#Partially deleted in new
chr10	133778257	133778498	chr10:133778257-133778498	7	-	133778257	133778257	16724991	1	241,	0,
#Deleted in new
chr10_GL383545v1_alt	3014	3203	chr10_GL383545v1_alt:3014-3203	7	+	3014	3014	16724991	1	189,	0,
#Deleted in new
chr10_GL383545v1_alt	29465	29572	chr10_GL383545v1_alt:29465-29572	3	+	29465	29465	8553170	1	107,	0,
#Deleted in new
chr10_GL383545v1_alt	93002	102898	chr10_GL383545v1_alt:93002-102898	7	-	93002	93002	16724991	6	210,65,138,107,174,114,	0,2813,5478,7474,9446,9782,
#Deleted in new
chr10_GL383545v1_alt	97146	97253	chr10_GL383545v1_alt:97146-97253	3	-	97146	97146	8553170	1	107,	0,
#Deleted in new
chr10_GL383545v1_alt	111362	111936	chr10_GL383545v1_alt:111362-111936	7	-	111362	111362	16724991	1	574,	0,
#Deleted in new
chr10_GL383545v1_alt	139783	140008	chr10_GL383545v1_alt:139783-140008	7	-	139783	139783	16724991	1	225,	0,
#Deleted in new
chr10_GL383545v1_alt	159832	176014	chr10_GL383545v1_alt:159832-176014	3	-	159939	175896	789624	4	1054,146,122,1207,	0,5025,13621,14975,
#Deleted in new
chr10_GL383545v1_alt	159926	176014	chr10_GL383545v1_alt:159926-176014	1	-	159926	175896	789624	5	73,172,146,122,1207,	0,788,4931,13527,14881,
#Deleted in new
chr10_GL383546v1_alt	1491	1693	chr10_GL383546v1_alt:1491-1693	7	+	1491	1491	16724991	1	202,	0,
#Deleted in new
chr10_GL383546v1_alt	5849	6195	chr10_GL383546v1_alt:5849-6195	3	-	5849	5849	8553170	1	346,	0,
#Deleted in new
chr10_GL383546v1_alt	12059	23091	chr10_GL383546v1_alt:12059-23091	7	-	12059	12059	16724991	5	249,138,174,114,207,	0,2821,6513,6849,10825,
#Deleted in new
chr10_GL383546v1_alt	13557	13664	chr10_GL383546v1_alt:13557-13664	3	-	13557	13557	8553170	1	107,	0,
#Deleted in new
chr10_GL383546v1_alt	56793	72129	chr10_GL383546v1_alt:56793-72129	7	-	56793	56793	16724991	7	100,236,116,176,143,205,163,	0,3828,6192,9907,11124,14623,15173,
#Deleted in new
chr10_GL383546v1_alt	82952	83891	chr10_GL383546v1_alt:82952-83891	7	+	82952	82952	16724991	1	939,	0,
#Deleted in new
chr10_GL383546v1_alt	127421	132606	chr10_GL383546v1_alt:127421-132606	1	-	128203	129190	789624	3	1781,142,100,	0,4772,5085,
#Deleted in new
chr10_GL383546v1_alt	127421	140376	chr10_GL383546v1_alt:127421-140376	3	-	128203	129190	789624	4	1781,142,70,85,	0,4772,5085,12870,
#Deleted in new
chr10_GL383546v1_alt	128125	132227	chr10_GL383546v1_alt:128125-132227	1	-	128203	129190	789624	2	1143,34,	0,4068,
#Deleted in new
chr10_GL383546v1_alt	215006	286950	chr10_GL383546v1_alt:215006-286950	3	+	215110	286518	0	13	254,199,82,123,107,173,147,204,87,179,122,101,612,	0,8307,21679,38015,49865,50784,54442,66254,67168,68862,69240,69552,71332,
#Deleted in new
chr10_GL383546v1_alt	215057	286944	chr10_GL383546v1_alt:215057-286944	1	+	215110	286518	0	14	203,199,82,123,107,173,147,204,87,179,122,101,171,606,	0,8256,21628,37964,49814,50733,54391,66203,67117,68811,69189,69501,69889,71281,
#Deleted in new
chr10_GL383546v1_alt	215110	286518	chr10_GL383546v1_alt:215110-286518	1	+	215110	253090	789624	13	150,199,125,107,173,147,204,87,179,122,101,171,180,	0,8203,37909,49761,50680,54338,66150,67064,68758,69136,69448,69836,71228,
#Deleted in new
chr10_GL383546v1_alt	264921	269317	chr10_GL383546v1_alt:264921-269317	0	+	264921	264921	8553170	3	57,173,126,	0,869,4270,
#Deleted in new
chr10_GL383546v1_alt	281260	282416	chr10_GL383546v1_alt:281260-282416	0	+	281260	281260	8553170	2	204,242,	0,914,
#Deleted in new
chr10_GL383546v1_alt	283443	284278	chr10_GL383546v1_alt:283443-284278	0	+	283443	283443	8553170	2	604,32,	0,803,
#Deleted in new
chr10_GL383546v1_alt	284072	285063	chr10_GL383546v1_alt:284072-285063	0	+	284072	284072	8553170	3	296,101,117,	0,486,874,
#Deleted in new
chr10_GL383546v1_alt	284251	285045	chr10_GL383546v1_alt:284251-285045	0	+	284251	284251	8553170	2	117,487,	0,307,
#Deleted in new
chr10_GL383546v1_alt	285400	293952	chr10_GL383546v1_alt:285400-293952	3	-	285400	285400	789624	3	283,97,82,	0,8274,8470,
#Deleted in new
chr10_GL383546v1_alt	295417	304716	chr10_GL383546v1_alt:295417-304716	0	-	295417	295417	8553170	4	3957,148,181,735,	0,4533,6644,8564,
#Deleted in new
chr10_GL383546v1_alt	298336	305158	chr10_GL383546v1_alt:298336-305158	3	-	299069	305158	0	4	1038,148,181,89,	0,1614,3725,6733,
#Deleted in new
chr10_GL383546v1_alt	298341	303035	chr10_GL383546v1_alt:298341-303035	0	-	298341	298341	8553170	3	1033,148,974,	0,1609,3720,
#Deleted in new
chr10_GL383546v1_alt	302217	305158	chr10_GL383546v1_alt:302217-305158	0	-	302217	305158	789624	2	25,89,	0,2852,
#Deleted in new
chr10_KI270824v1_alt	46070	46310	chr10_KI270824v1_alt:46070-46310	7	-	46070	46070	16724991	1	240,	0,
#Deleted in new
chr10_KI270824v1_alt	83192	83645	chr10_KI270824v1_alt:83192-83645	7	+	83192	83192	16724991	2	31,298,	0,155,
#Deleted in new
chr10_KI270824v1_alt	125277	159399	chr10_KI270824v1_alt:125277-159399	7	+	125277	125277	16724991	3	51,176,230,	0,8264,33892,
#Deleted in new
chr10_KI270824v1_alt	133541	159385	chr10_KI270824v1_alt:133541-159385	5	+	133541	133541	16724991	3	176,106,216,	0,20812,25628,
#Deleted in new
chr10_KI270824v1_alt	162290	164376	chr10_KI270824v1_alt:162290-164376	7	-	162290	162290	16724991	1	2086,	0,
#Deleted in new
chr10_KI270825v1_alt	15642	15747	chr10_KI270825v1_alt:15642-15747	3	-	15642	15642	8553170	1	105,	0,
#Deleted in new
chr10_KI270825v1_alt	19028	20568	chr10_KI270825v1_alt:19028-20568	7	-	19028	19028	16724991	1	1540,	0,
#Deleted in new
chr10_KI270825v1_alt	21557	31868	chr10_KI270825v1_alt:21557-31868	3	+	21557	21557	8553170	2	464,1564,	0,8747,
#Deleted in new
chr10_KI270825v1_alt	21857	22577	chr10_KI270825v1_alt:21857-22577	0	+	21857	21857	8553170	1	720,	0,
#Deleted in new
chr10_KI270825v1_alt	29352	30339	chr10_KI270825v1_alt:29352-30339	1	+	29352	29352	8553170	1	987,	0,
#Deleted in new
chr10_KI270825v1_alt	29482	165218	chr10_KI270825v1_alt:29482-165218	3	-	31131	165212	0	32	1753,110,110,128,144,197,171,149,184,141,134,163,151,90,113,145,124,1020,93,104,176,128,133,126,185,313,260,184,144,163,69,310,	0,3217,4058,5270,5660,14874,15967,17005,18756,20303,21133,21424,25760,26216,26986,28530,29104,30291,33593,38091,38564,39426,39950,43123,44947,51090,52656,62563,63436,65939,78338,135426,
#Deleted in new
chr10_KI270825v1_alt	29482	107883	chr10_KI270825v1_alt:29482-107883	0	-	29482	29482	8553170	22	1753,110,110,128,144,197,171,149,184,141,134,163,151,90,113,2781,93,104,176,128,133,93,	0,3217,4058,5270,5660,14874,15967,17005,18756,20303,21133,21424,25760,26216,26986,28530,33593,38091,38564,39426,39950,78308,
#Deleted in new
chr10_KI270825v1_alt	29482	68134	chr10_KI270825v1_alt:29482-68134	0	-	31131	68134	789624	20	1753,110,110,128,144,197,171,149,184,141,134,163,151,90,113,145,124,93,104,88,	0,3217,4058,5270,5660,14874,15967,17005,18756,20303,21133,21424,25760,26216,26986,28530,29104,33593,38091,38564,
#Deleted in new
chr10_KI270825v1_alt	30592	58740	chr10_KI270825v1_alt:30592-58740	0	-	30592	30592	8553170	17	643,110,110,128,144,197,171,149,184,141,134,163,151,90,113,145,154,	0,2107,2948,4160,4550,13764,14857,15895,17646,19193,20023,20314,24650,25106,25876,27420,27994,
#Deleted in new
chr10_KI270825v1_alt	32235	60230	chr10_KI270825v1_alt:32235-60230	0	-	46535	60230	789624	17	574,110,128,144,197,171,141,184,141,134,163,151,90,113,145,124,457,	0,1305,2517,2907,12121,13214,14252,16003,17550,18380,18671,23007,23463,24233,25777,26351,27538,
#Deleted in new
chr10_KI270825v1_alt	34752	128199	chr10_KI270825v1_alt:34752-128199	0	-	84123	128199	789624	30	128,144,264,171,149,184,141,134,163,151,90,113,145,124,1020,93,104,176,128,133,126,185,313,260,227,184,144,163,69,79,	0,390,9604,10697,11735,13486,15033,15863,16154,20490,20946,21716,23260,23834,25021,28323,32821,33294,34156,34680,37853,39677,45820,47386,49150,57293,58166,60669,73068,93368,
#Deleted in new
chr10_KI270825v1_alt	44796	50921	chr10_KI270825v1_alt:44796-50921	0	-	44796	44796	8553170	7	67,171,149,184,141,134,15,	0,653,1691,3442,4989,5819,6110,
#Deleted in new
chr10_KI270825v1_alt	45487	46669	chr10_KI270825v1_alt:45487-46669	0	-	45487	45487	8553170	2	133,182,	0,1000,
#Deleted in new
chr10_KI270825v1_alt	54724	58713	chr10_KI270825v1_alt:54724-58713	0	-	54724	54724	8553170	5	143,151,90,113,701,	0,518,974,1744,3288,
#Deleted in new
chr10_KI270825v1_alt	60473	63422	chr10_KI270825v1_alt:60473-63422	0	-	60473	60473	8553170	2	320,347,	0,2602,
#Deleted in new
chr10_KI270825v1_alt	105566	108302	chr10_KI270825v1_alt:105566-108302	3	+	105566	105566	8553170	2	234,1688,	0,1048,
#Deleted in new
chr10_KI270825v1_alt	150962	151237	chr10_KI270825v1_alt:150962-151237	3	-	150962	150962	8553170	1	275,	0,
#Deleted in new
chr10_KI270825v1_alt	166063	168516	chr10_KI270825v1_alt:166063-168516	3	+	166063	166063	8553170	2	251,236,	0,2217,
#Deleted in new
chr10_KI270825v1_alt	166322	168516	chr10_KI270825v1_alt:166322-168516	0	+	166322	166322	789624	1	2194,	0,
#Deleted in new
chr10_KN196480v1_fix	26285	26806	chr10_KN196480v1_fix:26285-26806	3	-	26285	26285	8553170	1	521,	0,
#Deleted in new
chr10_KN196480v1_fix	29602	47648	chr10_KN196480v1_fix:29602-47648	0	+	47533	47648	8553170	3	434,70,373,	0,13756,17673,
#Deleted in new
chr10_KN196480v1_fix	29611	236960	chr10_KN196480v1_fix:29611-236960	1	+	47533	235722	8553170	18	421,70,879,109,116,82,133,932,122,116,142,162,94,232,160,351,292,3796,	0,13747,17664,135034,144724,145084,147571,150463,152380,154288,156851,160144,164083,195646,196190,196945,200022,203553,
#Deleted in new
chr10_KN196480v1_fix	29930	226799	chr10_KN196480v1_fix:29930-226799	0	+	47533	226799	8553170	16	102,101,879,109,116,82,133,56,122,116,142,162,94,232,160,243,	0,13428,17345,134715,144405,144765,147252,150144,152061,153969,156532,159825,163764,195327,195871,196626,
#Deleted in new
chr10_KN196480v1_fix	30159	236913	chr10_KN196480v1_fix:30159-236913	1	+	47533	235722	8553170	17	52,879,109,116,82,133,56,122,116,142,162,94,232,160,351,292,3749,	0,17116,134486,144176,144536,147023,149915,151832,153740,156303,159596,163535,195098,195642,196397,199474,203005,
#Deleted in new
chr10_KN196480v1_fix	30167	236897	chr10_KN196480v1_fix:30167-236897	1	+	47533	235722	8553170	18	183,70,879,109,116,82,133,932,122,116,142,162,94,232,160,351,292,3733,	0,13191,17108,134478,144168,144528,147015,149907,151824,153732,156295,159588,163527,195090,195634,196389,199466,202997,
#Deleted in new
chr10_KN196480v1_fix	30174	236969	chr10_KN196480v1_fix:30174-236969	1	+	47533	235722	0	17	176,879,109,116,82,133,56,122,116,142,162,94,232,160,351,292,3805,	0,17101,134471,144161,144521,147008,149900,151817,153725,156288,159581,163520,195083,195627,196382,199459,202990,
#Deleted in new
chr10_KN196480v1_fix	30202	233539	chr10_KN196480v1_fix:30202-233539	0	+	47533	233539	8553170	15	148,879,109,116,82,122,116,142,162,94,232,160,351,292,375,	0,17073,134443,144133,144493,151789,153697,156260,159553,163492,195055,195599,196354,199431,202962,
#Deleted in new
chr10_KN196480v1_fix	30210	233597	chr10_KN196480v1_fix:30210-233597	0	+	47533	233597	8553170	18	140,70,879,109,116,82,133,383,122,116,142,162,94,232,160,351,292,433,	0,13148,17065,134435,144125,144485,146972,149864,151781,153689,156252,159545,163484,195047,195591,196346,199423,202954,
#Deleted in new
chr10_KN196480v1_fix	30233	226813	chr10_KN196480v1_fix:30233-226813	0	+	47533	226813	8553170	16	117,70,879,109,116,82,133,56,122,116,142,162,94,232,160,257,	0,13125,17042,134412,144102,144462,146949,149841,151758,153666,156229,159522,163461,195024,195568,196323,
#Deleted in new
chr10_KN196480v1_fix	30243	49658	chr10_KN196480v1_fix:30243-49658	1	+	47533	48220	8553170	2	107,2383,	0,17032,
#Deleted in new
chr10_KN196480v1_fix	30260	47556	chr10_KN196480v1_fix:30260-47556	0	+	47533	47556	8553170	3	182,70,281,	0,13098,17015,
#Deleted in new
chr10_KN196480v1_fix	30289	226792	chr10_KN196480v1_fix:30289-226792	0	+	47533	226792	8553170	9	61,70,879,109,116,94,232,160,236,	0,13069,16986,134356,144046,163405,194968,195512,196267,
#Deleted in new
chr10_KN196480v1_fix	31088	237300	chr10_KN196480v1_fix:31088-237300	1	+	47533	235722	789624	18	373,70,879,109,116,82,133,56,122,116,142,162,94,232,160,351,292,4136,	0,12270,16187,133557,143247,143607,146094,148986,150903,152811,155374,158667,162606,194169,194713,195468,198545,202076,
#Deleted in new
chr10_KN196480v1_fix	31094	47736	chr10_KN196480v1_fix:31094-47736	2	+	47533	47736	8553170	3	51,70,461,	0,12264,16181,
#Deleted in new
chr10_KN196480v1_fix	31124	236955	chr10_KN196480v1_fix:31124-236955	1	+	47533	235722	0	18	337,70,879,109,116,82,133,383,122,116,142,162,94,232,160,351,292,3791,	0,12234,16151,133521,143211,143571,146058,148950,150867,152775,155338,158631,162570,194133,194677,195432,198509,202040,
#Deleted in new
chr10_KN196480v1_fix	31227	226739	chr10_KN196480v1_fix:31227-226739	0	+	47533	226739	8553170	14	234,70,879,109,116,82,122,116,142,162,94,232,160,183,	0,12131,16048,133418,143108,143468,150764,152672,155235,158528,162467,194030,194574,195329,
#Deleted in new
chr10_KN196480v1_fix	31237	235866	chr10_KN196480v1_fix:31237-235866	1	+	47533	235722	0	17	224,879,109,116,82,133,56,122,116,142,162,94,232,160,351,292,2702,	0,16038,133408,143098,143458,145945,148837,150754,152662,155225,158518,162457,194020,194564,195319,198396,201927,
#Deleted in new
chr10_KN196480v1_fix	31239	237298	chr10_KN196480v1_fix:31239-237298	1	+	47533	235722	0	18	222,70,879,109,116,82,133,932,122,116,142,162,94,232,160,351,292,4134,	0,12119,16036,133406,143096,143456,145943,148835,150752,152660,155223,158516,162455,194018,194562,195317,198394,201925,
#Deleted in new
chr10_KN196480v1_fix	31255	167260	chr10_KN196480v1_fix:31255-167260	1	+	47533	164804	8553170	4	206,70,879,2615,	0,12103,16020,133390,
#Deleted in new
chr10_KN196480v1_fix	31271	51966	chr10_KN196480v1_fix:31271-51966	1	+	47533	48220	8553170	2	190,4691,	0,16004,
#Deleted in new
chr10_KN196480v1_fix	31275	233661	chr10_KN196480v1_fix:31275-233661	0	+	47533	233661	8553170	18	186,101,879,109,116,82,133,932,122,116,142,162,94,232,160,351,292,497,	0,12083,16000,133370,143060,143420,145907,148799,150716,152624,155187,158480,162419,193982,194526,195281,198358,201889,
#Deleted in new
chr10_KN196480v1_fix	31275	226774	chr10_KN196480v1_fix:31275-226774	0	+	47533	226774	8553170	15	186,70,879,109,116,82,133,56,122,116,142,94,232,160,218,	0,12083,16000,133370,143060,143420,145907,148799,150716,152624,155187,162419,193982,194526,195281,
#Deleted in new
chr10_KN196480v1_fix	31278	229647	chr10_KN196480v1_fix:31278-229647	0	+	47533	229647	8553170	16	183,879,109,116,82,133,383,122,116,142,162,94,232,160,351,14,	0,15997,133367,143057,143417,145904,148796,150713,152621,155184,158477,162416,193979,194523,195278,198355,
#Deleted in new
chr10_KN196480v1_fix	31303	194633	chr10_KN196480v1_fix:31303-194633	0	+	31303	31303	8553170	12	158,70,879,109,116,82,133,2039,116,142,162,939,	0,12055,15972,133342,143032,143392,145879,148771,152596,155159,158452,162391,
#Deleted in new
chr10_KN196480v1_fix	31310	226643	chr10_KN196480v1_fix:31310-226643	0	+	31310	31310	8553170	15	151,70,879,109,116,82,133,2039,116,142,162,94,232,160,87,	0,12048,15965,133335,143025,143385,145872,148764,152589,155152,158445,162384,193947,194491,195246,
#Deleted in new
chr10_KN196480v1_fix	31556	226809	chr10_KN196480v1_fix:31556-226809	0	+	47533	226809	8553170	16	63,70,879,109,116,82,133,56,122,116,142,162,94,232,160,253,	0,11802,15719,133089,142779,143139,145626,148518,150435,152343,154906,158199,162138,193701,194245,195000,
#Deleted in new
chr10_KN196480v1_fix	31733	236961	chr10_KN196480v1_fix:31733-236961	1	+	47533	235722	0	18	57,70,879,109,116,82,133,383,122,116,142,162,94,232,160,351,292,3797,	0,11625,15542,132912,142602,142962,145449,148341,150258,152166,154729,158022,161961,193524,194068,194823,197900,201431,
#Deleted in new
chr10_KN196480v1_fix	31812	47600	chr10_KN196480v1_fix:31812-47600	0	+	47533	47600	8553170	3	134,70,325,	0,11546,15463,
#Deleted in new
chr10_KN196480v1_fix	47295	226801	chr10_KN196480v1_fix:47295-226801	0	+	47533	225470	8553170	13	859,109,116,82,133,932,122,116,142,162,232,160,245,	0,117350,127040,127400,129887,132779,134696,136604,139167,142460,177962,178506,179261,
#Deleted in new
chr10_KN196480v1_fix	47295	113273	chr10_KN196480v1_fix:47295-113273	0	+	47533	111918	8553170	3	859,382,110,	0,64545,65868,
#Deleted in new
chr10_KN196480v1_fix	47295	175426	chr10_KN196480v1_fix:47295-175426	0	+	47295	47295	8553170	4	859,109,116,731,	0,117350,127040,127400,
#Deleted in new
chr10_KN196480v1_fix	47295	226663	chr10_KN196480v1_fix:47295-226663	0	+	47533	226663	8553170	11	859,109,116,82,122,116,142,94,232,160,107,	0,117350,127040,127400,134696,136604,139167,146399,177962,178506,179261,
#Deleted in new
chr10_KN196480v1_fix	47295	225463	chr10_KN196480v1_fix:47295-225463	0	+	47533	183913	8553170	6	859,109,116,142,94,206,	0,117350,136604,139167,146399,177962,
#Deleted in new
chr10_KN196480v1_fix	47539	177210	chr10_KN196480v1_fix:47539-177210	0	+	47539	47539	8553170	4	615,109,116,28,	0,117106,126796,129643,
#Deleted in new
chr10_KN196480v1_fix	47558	174947	chr10_KN196480v1_fix:47558-174947	0	+	47558	47558	8553170	3	596,109,612,	0,117087,126777,
#Deleted in new
chr10_KN196480v1_fix	180621	193772	chr10_KN196480v1_fix:180621-193772	0	+	180621	186486	8553170	5	385,122,142,162,78,	0,1370,5841,9134,13073,
#Deleted in new
chr10_KN196480v1_fix	181196	230840	chr10_KN196480v1_fix:181196-230840	0	+	181196	181196	8553170	8	917,116,3455,94,232,160,351,1207,	0,2703,5266,12498,44061,44605,45360,48437,
#Deleted in new
chr10_KN196480v1_fix	190004	226630	chr10_KN196480v1_fix:190004-226630	0	+	190004	190004	8553170	4	3784,232,160,74,	0,35253,35797,36552,
#Deleted in new
chr10_KN196480v1_fix	207730	229850	chr10_KN196480v1_fix:207730-229850	3	-	207730	207730	8553170	2	124,65,	0,22055,
#Deleted in new
chr10_KN196480v1_fix	222150	230803	chr10_KN196480v1_fix:222150-230803	0	+	222150	222150	8553170	4	3339,160,351,1170,	0,3651,4406,7483,
#Deleted in new
chr10_KN196480v1_fix	224178	228908	chr10_KN196480v1_fix:224178-228908	0	+	224178	224178	8553170	2	1311,3107,	0,1623,
#Deleted in new
chr10_KN196480v1_fix	224313	228814	chr10_KN196480v1_fix:224313-228814	0	+	224313	224313	8553170	3	1176,160,2258,	0,1488,2243,
#Deleted in new
chr10_KN196480v1_fix	228150	228927	chr10_KN196480v1_fix:228150-228927	3	-	228150	228150	8553170	2	271,109,	0,668,
#Deleted in new
chr10_KN196480v1_fix	242511	263190	chr10_KN196480v1_fix:242511-263190	3	-	242511	263190	0	3	242,221,200,	0,5961,20479,
#Deleted in new
chr10_KN196480v1_fix	246551	260430	chr10_KN196480v1_fix:246551-260430	3	+	246551	246551	8553170	4	91,156,143,1947,	0,9503,11132,11932,
#Deleted in new
chr10_KQ090021v1_fix	33749	35085	chr10_KQ090021v1_fix:33749-35085	5	+	33749	33749	16724991	2	62,362,	0,974,
#Deleted in new
chr10_KQ090021v1_fix	34134	61434	chr10_KQ090021v1_fix:34134-61434	7	+	34134	34134	16724991	4	24,139,154,1803,	0,589,13786,25497,
#Deleted in new
chr10_KQ090021v1_fix	34246	34903	chr10_KQ090021v1_fix:34246-34903	4	+	34246	34246	16724991	2	290,180,	0,477,
#Deleted in new
chr10_KQ090021v1_fix	48639	48920	chr10_KQ090021v1_fix:48639-48920	3	-	48639	48639	8553170	1	281,	0,
#Deleted in new
chr10_KQ090021v1_fix	59691	60102	chr10_KQ090021v1_fix:59691-60102	5	+	59691	59691	16724991	1	411,	0,
#Deleted in new
chr10_KQ090021v1_fix	77777	78311	chr10_KQ090021v1_fix:77777-78311	1	-	77777	78311	789624	1	534,	0,
#Deleted in new
chr10_KQ090021v1_fix	77777	78311	chr10_KQ090021v1_fix:77777-78311	3	-	77777	78311	789624	1	534,	0,
#Deleted in new
chr10_KQ090021v1_fix	79261	182163	chr10_KQ090021v1_fix:79261-182163	1	+	79773	181261	8553170	9	1110,85,45,44,239,142,167,225,1088,	0,30586,62043,67576,69543,88645,94380,97421,101814,
#Deleted in new
chr10_KQ090021v1_fix	79261	182163	chr10_KQ090021v1_fix:79261-182163	3	+	79773	181261	789624	9	1110,85,45,44,239,142,167,225,1088,	0,30586,62043,67576,69543,88645,94380,97421,101814,
#Deleted in new
chr10_KQ090021v1_fix	94515	96250	chr10_KQ090021v1_fix:94515-96250	3	+	94515	94515	8553170	3	332,39,128,	0,1379,1607,
#Deleted in new
chr10_KQ090021v1_fix	161290	161813	chr10_KQ090021v1_fix:161290-161813	7	+	161290	161290	16724991	1	523,	0,
#Deleted in new
chr10_KQ090021v1_fix	210406	210484	chr10_KQ090021v1_fix:210406-210484	3	-	210406	210406	8553170	1	78,	0,
#Partially deleted in new
chr11	75779	76143	chr11:75779-76143	7	+	75779	75779	16724991	1	364,	0,
#Deleted in new
chr11	86648	87586	chr11:86648-87586	7	-	86648	86648	16724991	1	938,	0,
#Partially deleted in new
chr11	112966	125927	chr11:112966-125927	3	-	112966	112966	8553170	4	145,59,169,350,	0,149,8291,12611,
#Partially deleted in new
chr11	121278	125784	chr11:121278-125784	0	-	121278	121278	8553170	2	148,207,	0,4299,
#Deleted in new
chr11	123311	126123	chr11:123311-126123	7	+	123311	123311	16724991	2	1789,952,	0,1860,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	127203	138998	chr11:127203-138998	3	-	127203	127203	8553170	7	259,135,1802,58,191,65,43,	0,310,2368,4263,6384,10843,11752,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	129278	186136	chr11:129278-186136	3	+	129278	129278	8553170	3	235,119,235,	0,42319,56623,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	133572	139612	chr11:133572-139612	1	-	133572	133572	8553170	7	206,233,58,686,65,197,124,	0,991,1317,1602,4474,5383,5916,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	133613	139117	chr11:133613-139117	0	-	133613	133613	8553170	5	165,233,58,65,162,	0,950,1276,4433,5342,
#Deleted in new
chr11	152998	153102	chr11:152998-153102	3	-	152998	152998	8553170	1	104,	0,
#Partially deleted in new
chr11	167783	207383	chr11:167783-207383	1	-	168957	207321	789624	6	101,110,196,57,92,81,	0,1159,12425,37827,38168,39519,
#Deleted in new
chr11	193079	194573	chr11:193079-194573	3	+	193099	194450	789624	3	75,200,156,	0,632,1338,
#Deleted in new
chr11	196737	200258	chr11:196737-200258	3	+	197304	200033	789624	7	309,117,201,102,122,141,315,	0,559,823,1461,1726,2631,3206,
#Deleted in new
chr11	196794	200261	chr11:196794-200261	0	+	196794	196794	8553170	3	619,201,2233,	0,766,1234,
#Deleted in new
chr11	196952	200071	chr11:196952-200071	1	+	197304	200033	789624	6	94,117,201,102,122,128,	0,344,608,1246,1511,2991,
#Deleted in new
chr11	197302	200033	chr11:197302-200033	1	+	197304	200033	789624	4	111,104,81,90,	0,258,1202,2641,
#Deleted in new
chr11	202923	207382	chr11:202923-207382	1	-	205469	207321	789624	3	2744,92,80,	0,3028,4379,
#Deleted in new
chr11	202925	207428	chr11:202925-207428	3	-	205301	207321	789624	4	2544,57,92,126,	0,2685,3026,4377,
#Deleted in new
chr11	203622	205470	chr11:203622-205470	3	+	203622	203622	8553170	2	448,126,	0,1722,
#Deleted in new
chr11	205073	207374	chr11:205073-207374	1	-	205301	207321	789624	3	396,92,72,	0,878,2229,
#Deleted in new
chr11	205102	207356	chr11:205102-207356	1	-	205423	207321	789624	4	330,57,92,54,	0,508,849,2200,
#Deleted in new
chr11	205168	207221	chr11:205168-207221	1	-	205301	205993	789624	4	301,57,92,215,	0,442,783,1838,
#Deleted in new
chr11	205435	207378	chr11:205435-207378	0	-	205435	205435	8553170	2	608,76,	0,1867,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	207510	215113	chr11:207510-215113	3	+	208854	214350	789624	10	1428,48,594,92,151,96,145,145,120,884,	0,1760,1896,3060,3688,4905,5104,5326,5788,6719,
#Partially deleted in new
chr11	208529	215113	chr11:208529-215113	1	+	208854	214350	789624	10	409,48,594,92,151,96,163,145,120,884,	0,741,877,2041,2669,3886,4067,4307,4769,5700,
#Deleted in new
chr11	208799	210662	chr11:208799-210662	0	+	208854	209249	789624	4	139,144,594,88,	0,375,607,1775,
#Deleted in new
chr11	208799	209791	chr11:208799-209791	0	+	208854	209791	789624	3	139,48,313,	0,471,679,
#Deleted in new
chr11	208836	209788	chr11:208836-209788	0	+	208836	208836	8553170	2	102,518,	0,434,
#Deleted in new
chr11	208840	209811	chr11:208840-209811	0	+	208854	209811	789624	3	98,60,405,	0,418,566,
#Deleted in new
chr11	208854	209249	chr11:208854-209249	1	+	208854	209249	789624	2	84,75,	0,320,
#Partially deleted in new
chr11	209068	215113	chr11:209068-215113	1	+	209292	214350	789624	8	932,92,151,96,145,145,120,884,	0,1502,2130,3347,3546,3768,4230,5161,
#Deleted in new
chr11	209079	209738	chr11:209079-209738	0	+	209604	209738	789624	2	239,332,	0,327,
#Deleted in new
chr11	209335	209406	chr11:209335-209406	3	+	209335	209335	5263520	1	71,	0,
#Deleted in new
chr11	209629	212724	chr11:209629-212724	0	+	209629	212724	789624	6	371,39,92,151,96,110,	0,777,941,1569,2786,2985,
#Deleted in new
chr11	209744	212591	chr11:209744-212591	0	+	209744	209744	8553170	4	256,92,151,176,	0,826,1454,2671,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	210363	213780	chr11:210363-213780	0	+	210363	210363	8553170	1	3417,	0,
#Deleted in new
chr11	212467	212916	chr11:212467-212916	0	+	212467	212467	8553170	2	44,302,	0,147,
#Partially deleted in new
chr11	212727	214557	chr11:212727-214557	0	+	212727	214350	789624	4	32,145,120,352,	0,109,571,1478,
#Partially deleted in new
chr11	212869	214495	chr11:212869-214495	0	+	212869	214495	789624	3	112,120,208,	0,429,1418,
#Partially deleted in new
chr11	213035	214516	chr11:213035-214516	0	+	213035	213035	8553170	2	383,287,	0,1194,
#Partially deleted in new
chr11	213448	214556	chr11:213448-214556	0	+	213448	213448	8553170	2	49,327,	0,781,
#Partially deleted in new
chr11	215457	236431	chr11:215457-236431	3	-	216697	236328	0	7	1261,210,162,101,233,192,384,	0,3374,8620,14994,17525,17885,20590,
#Partially deleted in new
chr11	216144	236337	chr11:216144-236337	0	-	223753	236328	789624	5	574,264,1471,174,144,	0,2633,6234,7921,20049,
#Partially deleted in new
chr11	216178	236343	chr11:216178-236343	0	-	233528	236328	789624	7	540,210,162,101,233,192,150,	0,2653,7899,14273,16804,17164,20015,
#Partially deleted in new
chr11	216205	236354	chr11:216205-236354	1	-	216697	236328	789624	7	513,210,162,101,233,95,161,	0,2626,7872,14246,16777,17137,19988,
#Partially deleted in new
chr11	216390	236354	chr11:216390-236354	1	-	216697	236328	789624	6	328,264,162,101,233,307,	0,2387,7687,14061,16592,19657,
#Partially deleted in new
chr11	216524	236352	chr11:216524-236352	1	-	216697	236328	789624	6	194,210,101,233,192,305,	0,2307,13927,16458,16818,19523,
#Partially deleted in new
chr11	216610	236834	chr11:216610-236834	1	-	216697	233389	0	7	108,210,162,101,233,192,219,	0,2221,7467,13841,16372,16732,20005,
#Partially deleted in new
chr11	224089	233928	chr11:224089-233928	0	-	224089	224089	8553170	4	150,233,192,18,	0,8893,9253,9821,
#Partially deleted in new
chr11	224166	236330	chr11:224166-236330	0	-	233430	236328	789624	5	73,101,233,95,283,	0,6285,8816,9176,11881,
#Partially deleted in new
chr11	224221	236339	chr11:224221-236339	0	-	233528	236328	789624	5	18,190,233,192,146,	0,6230,8761,9121,11972,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	225672	236931	chr11:225672-236931	0	-	225672	225672	8553170	5	409,101,233,192,316,	0,4779,7310,7670,10943,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	225761	230692	chr11:225761-230692	0	-	225761	225761	8553170	2	320,241,	0,4690,
#Partially deleted in new
chr11	230602	236345	chr11:230602-236345	0	-	233528	236328	789624	4	104,233,192,152,	0,2380,2740,5591,
#Partially deleted in new
chr11	232982	236859	chr11:232982-236859	0	-	232982	233389	789624	4	233,192,94,244,	0,360,928,3633,
#Deleted in new
chr11	233191	233683	chr11:233191-233683	0	-	233191	233389	789624	2	24,341,	0,151,
#Partially deleted in new
chr11	233208	236326	chr11:233208-236326	0	-	233208	233389	789624	3	7,144,279,	0,134,2839,
#Partially deleted in new
chr11	236545	252956	chr11:236545-252956	3	+	237049	252600	0	13	599,79,35,56,44,87,172,80,126,63,81,117,452,	0,2452,7495,7615,7880,8129,10731,12230,12386,14257,15000,15274,15959,
#Partially deleted in new
chr11	236965	248791	chr11:236965-248791	0	+	237049	247278	789624	8	179,79,35,56,44,31,172,16,	0,2032,7075,7195,7460,7709,10311,11810,
#Partially deleted in new
chr11	236976	252981	chr11:236976-252981	1	+	237049	252600	0	11	168,176,44,87,172,80,126,63,81,117,477,	0,7064,7449,7698,10300,11799,11955,13826,14569,14843,15528,
#Partially deleted in new
chr11	236976	247300	chr11:236976-247300	0	+	236976	236976	8553170	5	168,79,429,87,24,	0,2021,7064,7698,10300,
#Partially deleted in new
chr11	236980	251611	chr11:236980-251611	0	+	237049	251611	789624	9	164,56,44,87,172,80,126,63,66,	0,7180,7445,7694,10296,11795,11951,13822,14565,
#Partially deleted in new
chr11	236995	252984	chr11:236995-252984	1	+	237049	252600	789624	15	149,79,35,56,44,87,172,80,126,63,81,126,6,30,438,	0,2002,7045,7165,7430,7679,10281,11780,11936,13807,14550,14824,15509,15520,15551,
#Partially deleted in new
chr11	236999	252966	chr11:236999-252966	0	+	237049	244079	789624	12	145,79,176,44,87,172,80,126,63,81,117,462,	0,1998,7041,7426,7675,10277,11776,11932,13803,14546,14820,15505,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	237003	248197	chr11:237003-248197	0	+	237003	237003	8553170	6	141,35,56,44,87,921,	0,7037,7157,7422,7671,10273,
#Partially deleted in new
chr11	237025	252953	chr11:237025-252953	1	+	237049	252600	789624	12	119,79,35,56,44,87,172,80,126,63,117,449,	0,1972,7015,7135,7400,7649,10251,11750,11906,13777,14794,15479,
#Partially deleted in new
chr11	237037	252981	chr11:237037-252981	0	+	237049	244205	789624	12	107,79,56,44,87,172,80,126,63,81,117,477,	0,1960,7123,7388,7637,10239,11738,11894,13765,14508,14782,15467,
#Deleted in new
chr11	243098	243483	chr11:243098-243483	7	-	243098	243098	16724991	1	385,	0,
#Partially deleted in new
chr11	244428	252827	chr11:244428-252827	0	+	244428	252600	789624	7	41,87,172,80,126,63,323,	0,246,2848,4347,4503,6374,8076,
#Deleted in new
chr11	248606	251894	chr11:248606-251894	0	+	248606	248606	8553170	4	451,63,81,75,	0,2196,2939,3213,
#Deleted in new
chr11	250783	252983	chr11:250783-252983	0	+	250783	250783	8553170	1	2200,	0,
#Deleted in new
chr11	251226	252845	chr11:251226-252845	0	+	251226	251226	8553170	4	114,81,117,341,	0,319,593,1278,
#Deleted in new
chr11	251542	252617	chr11:251542-252617	0	+	251542	251542	8553170	2	394,113,	0,962,
#Partially deleted in new
chr11	278364	285359	chr11:278364-285359	1	+	278569	285304	789624	8	234,281,39,1756,93,171,168,194,	0,962,1469,1719,4340,5865,6110,6801,
#Partially deleted in new
chr11	278569	285304	chr11:278569-285304	3	+	278569	285304	789624	8	29,281,39,1756,96,171,168,139,	0,757,1264,1514,4132,5660,5905,6596,
#Deleted in new
chr11	279058	279860	chr11:279058-279860	0	+	279058	279058	8553170	2	549,27,	0,775,
#Deleted in new
chr11	287304	288298	chr11:287304-288298	0	+	287304	287304	8553170	2	30,279,	0,715,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	288037	288987	chr11:288037-288987	3	+	288037	288037	8553170	2	774,38,	0,912,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	288085	288978	chr11:288085-288978	1	+	288085	288085	8553170	3	407,181,29,	0,533,864,
#Deleted in new
chr11	289134	295678	chr11:289134-295678	0	+	289134	289134	8553170	11	105,272,211,1418,132,617,134,96,98,212,1123,	0,669,1255,1543,3411,3751,4459,4695,4964,5132,5421,
#Deleted in new
chr11	289137	296107	chr11:289137-296107	3	+	289816	294749	789624	14	102,272,211,436,120,132,112,73,137,134,96,98,212,1552,	0,666,1252,1540,2838,3408,3748,4025,4228,4456,4692,4961,5129,5418,
#Deleted in new
chr11	289171	295676	chr11:289171-295676	1	+	290738	294749	789624	13	68,206,211,456,120,132,112,73,58,96,98,212,1121,	0,698,1218,1486,2804,3374,3714,3991,4498,4658,4927,5095,5384,
#Deleted in new
chr11	289177	290800	chr11:289177-290800	0	+	289177	289177	8553170	3	62,272,411,	0,626,1212,
#Deleted in new
chr11	289558	295258	chr11:289558-295258	1	+	289816	294749	789624	13	517,211,436,120,132,98,168,137,134,96,98,212,703,	0,831,1119,2417,2987,3327,3509,3807,4035,4271,4540,4708,4997,
#Deleted in new
chr11	289919	292576	chr11:289919-292576	0	+	289919	292003	789624	6	156,211,104,112,120,31,	0,470,758,1082,2056,2626,
#Deleted in new
chr11	291559	295683	chr11:291559-295683	0	+	291559	291559	8553170	8	536,132,112,565,96,98,212,1128,	0,986,1326,1603,2270,2539,2707,2996,
#Deleted in new
chr11	293678	294732	chr11:293678-294732	0	+	293678	294732	789624	5	49,96,98,158,177,	0,151,420,642,877,
#Deleted in new
chr11	298199	299526	chr11:298199-299526	3	-	298500	299490	789624	2	514,222,	0,1105,
#Partially deleted in new
chr11	303855	304144	chr11:303855-304144	7	-	303855	303855	16724991	1	289,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	307630	309230	chr11:307630-309230	1	+	308252	309165	789624	3	162,208,218,	0,600,1382,
#Deleted in new
chr11	307926	309392	chr11:307926-309392	3	+	308192	309165	789624	2	512,380,	0,1086,
#Deleted in new
chr11	308162	309395	chr11:308162-309395	1	+	308192	309165	789624	2	276,383,	0,850,
#Deleted in new
chr11	308216	309395	chr11:308216-309395	1	+	308252	309165	789624	2	222,383,	0,796,
#Deleted in new
chr11	308319	309392	chr11:308319-309392	0	+	308319	308802	789624	3	119,135,380,	0,435,693,
#Partially deleted in new
chr11	308407	315272	chr11:308407-315272	0	+	308407	315113	789624	2	31,351,	0,6514,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	310138	311141	chr11:310138-311141	3	-	310138	310138	8553170	2	285,107,	0,896,
#Deleted in new
chr11	313505	315272	chr11:313505-315272	3	+	314170	315113	789624	3	186,193,351,	0,658,1416,
#Deleted in new
chr11	313526	315240	chr11:313526-315240	1	+	314170	315113	789624	3	165,360,319,	0,470,1395,
#Deleted in new
chr11	313852	315272	chr11:313852-315272	1	+	314170	315113	789624	2	504,351,	0,1069,
#Deleted in new
chr11	314417	314962	chr11:314417-314962	0	+	314417	314417	8553170	2	39,41,	0,504,
#Deleted in new
chr11	318639	319615	chr11:318639-319615	0	+	318639	318639	8553170	2	107,259,	0,717,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	318652	325631	chr11:318652-325631	3	+	318652	318652	8553170	2	94,1057,	0,5922,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	318671	325069	chr11:318671-325069	1	+	318671	318671	8553170	2	75,959,	0,5439,
#Deleted in new
chr11	319668	321050	chr11:319668-321050	3	-	319837	320813	789624	2	322,486,	0,896,
#Deleted in new
chr11	319745	320683	chr11:319745-320683	0	-	320200	320683	789624	3	245,136,119,	0,367,819,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	319772	321340	chr11:319772-321340	1	-	319837	320750	789624	3	218,208,117,	0,792,1451,
#Partially deleted in new
chr11	319772	327537	chr11:319772-327537	1	-	319837	320750	789624	3	218,208,287,	0,792,7478,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	321990	322426	chr11:321990-322426	3	+	321990	321990	8553170	2	233,47,	0,389,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	322185	322727	chr11:322185-322727	3	-	322185	322185	8553170	2	215,171,	0,371,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	325702	326294	chr11:325702-326294	3	-	325702	325702	8553170	1	592,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	327170	329453	chr11:327170-329453	1	+	327170	327170	8553170	2	566,261,	0,2022,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	327309	330122	chr11:327309-330122	3	+	327309	327309	8553170	3	319,128,140,	0,1794,2673,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	327399	327957	chr11:327399-327957	0	+	327399	327399	8553170	2	229,228,	0,330,
#Deleted in new
chr11	333191	333688	chr11:333191-333688	3	+	333191	333191	8553170	1	497,	0,
#Deleted in new
chr11	369795	372807	chr11:369795-372807	0	+	369795	369795	8553170	3	159,104,146,	0,2313,2866,
#Deleted in new
chr11	369803	382116	chr11:369803-382116	3	+	369803	381792	789624	20	151,104,93,96,91,101,68,79,67,135,110,101,101,907,284,154,73,154,127,448,	0,2305,2858,3048,3222,3387,3645,3946,5657,5835,6043,6270,6447,6617,9614,10062,10326,10488,11021,11865,
#Deleted in new
chr11	375460	376108	chr11:375460-376108	0	+	375460	375460	8553170	3	67,318,35,	0,178,613,
#Deleted in new
chr11	379981	380951	chr11:379981-380951	0	+	379981	380143	789624	4	38,102,154,127,	0,119,310,843,
#Deleted in new
chr11	380291	382109	chr11:380291-382109	0	+	380291	380678	789624	3	154,281,441,	0,379,1377,
#Deleted in new
chr11	392613	397198	chr11:392613-397198	0	+	392627	397198	789624	4	95,196,80,385,	0,1715,3994,4200,
#Deleted in new
chr11	393448	397655	chr11:393448-397655	0	+	396969	397655	789624	5	86,196,80,632,117,	0,880,3159,3365,4090,
#Deleted in new
chr11	393462	397329	chr11:393462-397329	0	+	396969	397329	789624	4	55,196,80,516,	0,866,3145,3351,
#Deleted in new
chr11	394144	397438	chr11:394144-397438	0	+	396969	397438	789624	4	39,196,80,625,	0,184,2463,2669,
#Deleted in new
chr11	394216	404908	chr11:394216-404908	3	+	394292	404569	789624	13	308,80,632,124,205,175,118,171,186,154,193,88,375,	0,2391,2597,3322,4775,5750,6117,6318,8861,9401,9726,10019,10317,
#Deleted in new
chr11	394242	397312	chr11:394242-397312	0	+	394292	397312	789624	4	92,16,80,499,	0,266,2365,2571,
#Deleted in new
chr11	394242	396915	chr11:394242-396915	0	+	394242	394242	8553170	2	282,308,	0,2365,
#Deleted in new
chr11	396150	396985	chr11:396150-396985	0	+	396150	396150	8553170	3	189,80,172,	0,457,663,
#Deleted in new
chr11	397371	397776	chr11:397371-397776	0	+	397371	397371	8553170	2	74,238,	0,167,
#Deleted in new
chr11	397629	400260	chr11:397629-400260	0	+	397629	397629	8553170	3	33,205,294,	0,1362,2337,
#Deleted in new
chr11	404086	404681	chr11:404086-404681	0	+	404086	404533	789624	2	49,446,	0,149,
#Deleted in new
chr11	405715	417397	chr11:405715-417397	3	-	405895	409874	789624	10	344,190,151,103,144,141,134,199,160,73,	0,633,1127,1346,1709,2101,2357,2979,4152,11609,
#Deleted in new
chr11	405715	417325	chr11:405715-417325	1	-	405895	409874	789624	10	344,190,151,103,144,141,134,199,160,32,	0,633,1127,1346,1709,2101,2357,2979,4152,11578,
#Deleted in new
chr11	405715	414976	chr11:405715-414976	1	-	405895	409874	789624	10	344,190,151,103,144,141,134,199,160,154,	0,633,1127,1346,1709,2101,2357,2979,4152,9107,
#Deleted in new
chr11	405715	407135	chr11:405715-407135	0	-	405895	407135	789624	3	344,190,74,	0,633,1346,
#Deleted in new
chr11	405715	417455	chr11:405715-417455	0	-	405715	405715	8553170	7	344,816,110,141,134,160,162,	0,633,1709,2101,2357,4152,11578,
#Deleted in new
chr11	405715	406370	chr11:405715-406370	0	-	405895	406370	789624	2	344,229,	0,426,
#Deleted in new
chr11	405727	407191	chr11:405727-407191	0	-	405727	405727	8553170	4	332,190,151,130,	0,621,1115,1334,
#Deleted in new
chr11	405871	409977	chr11:405871-409977	1	-	405902	409874	789624	8	667,151,103,144,141,134,199,110,	0,971,1190,1553,1945,2201,2823,3996,
#Deleted in new
chr11	406426	407195	chr11:406426-407195	0	-	406426	406426	8553170	2	567,134,	0,635,
#Deleted in new
chr11	406842	414957	chr11:406842-414957	0	-	406842	408135	789624	7	151,103,144,106,134,160,135,	0,219,582,1009,1230,3025,7980,
#Deleted in new
chr11	406875	414931	chr11:406875-414931	0	-	406875	406875	8553170	6	118,103,144,141,134,109,	0,186,549,941,1197,7947,
#Deleted in new
chr11	407062	410014	chr11:407062-410014	0	-	407062	407062	8553170	5	102,144,141,199,147,	0,362,754,1632,2805,
#Deleted in new
chr11	407122	414984	chr11:407122-414984	0	-	407122	407122	8553170	6	42,144,141,134,160,162,	0,302,694,950,2745,7700,
#Deleted in new
chr11	407232	407846	chr11:407232-407846	0	-	407232	407232	8553170	2	336,30,	0,584,
#Deleted in new
chr11	407314	414923	chr11:407314-414923	0	-	407314	407314	8553170	4	220,141,134,101,	0,502,758,7508,
#Deleted in new
chr11	407451	414989	chr11:407451-414989	0	-	407451	407451	8553170	6	117,141,134,208,160,167,	0,365,621,1442,2416,7371,
#Deleted in new
chr11	407451	414948	chr11:407451-414948	0	-	407451	409874	789624	5	83,141,199,160,126,	0,365,1243,2416,7371,
#Deleted in new
chr11	407526	410016	chr11:407526-410016	0	-	407526	407526	8553170	5	42,106,134,199,149,	0,325,546,1168,2341,
#Deleted in new
chr11	407888	415004	chr11:407888-415004	0	-	407888	407888	8553170	5	69,134,199,168,182,	0,184,806,1971,6934,
#Deleted in new
chr11	407896	414999	chr11:407896-414999	0	-	407896	407896	8553170	4	61,134,199,177,	0,176,798,6926,
#Deleted in new
chr11	408762	414996	chr11:408762-414996	0	-	408762	409256	789624	4	131,92,160,174,	0,454,1105,6060,
#Deleted in new
chr11	409465	414989	chr11:409465-414989	0	-	409465	409465	8553170	2	562,167,	0,5357,
#Partially deleted in new
chr11	417932	429758	chr11:417932-429758	0	-	417932	417932	8553170	11	657,270,1034,143,98,58,112,37,165,105,189,	0,787,1649,2785,3012,3208,10155,10425,10542,10789,11637,
#Partially deleted in new
chr11	417934	429866	chr11:417934-429866	0	-	417934	417934	8553170	14	655,94,102,148,153,143,98,58,112,37,165,105,179,109,	0,785,953,1647,2528,2783,3010,3206,10153,10423,10540,10787,11539,11823,
#Partially deleted in new
chr11	417937	441996	chr11:417937-441996	0	-	417937	417937	8553170	16	652,94,102,1279,98,58,112,37,165,105,610,135,1766,123,75,76,	0,782,950,1644,3007,3203,10150,10420,10537,10784,11632,12331,13756,15877,16086,23983,
#Partially deleted in new
chr11	418191	441957	chr11:418191-441957	0	-	418191	418191	8553170	22	398,94,102,148,153,143,98,58,112,37,165,105,83,61,97,135,213,56,146,123,75,37,	0,528,696,1390,2271,2526,2753,2949,9896,10166,10283,10530,11378,11566,11891,12077,13502,13807,15122,15623,15832,23729,
#Partially deleted in new
chr11	418262	442011	chr11:418262-442011	3	-	418370	441926	789624	23	327,94,102,148,153,143,98,58,112,37,165,105,83,61,97,135,74,59,56,146,123,75,91,	0,457,625,1319,2200,2455,2682,2878,9825,10095,10212,10459,11307,11495,11820,12006,13431,13585,13736,15051,15552,15761,23658,
#Deleted in new
chr11	418540	419415	chr11:418540-419415	0	-	418540	418540	8553170	3	49,94,528,	0,179,347,
#Deleted in new
chr11	420928	421286	chr11:420928-421286	0	-	420928	420928	8553170	2	114,146,	0,212,
#Deleted in new
chr11	429542	430113	chr11:429542-430113	0	-	429542	429542	8553170	2	110,356,	0,215,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	440398	440693	chr11:440398-440693	3	-	440398	440398	8553170	1	295,	0,
#Partially deleted in new
chr11	448267	487053	chr11:448267-487053	0	+	448267	448267	8553170	4	152,102,68,115,	0,11919,30817,38671,
#Partially deleted in new
chr11	450279	491387	chr11:450279-491387	3	+	450455	490582	789624	12	358,102,83,68,135,51,114,119,115,146,186,968,	0,9907,23615,28805,36659,37140,37919,38249,39120,39308,39603,40140,
#Partially deleted in new
chr11	450295	487470	chr11:450295-487470	0	+	450455	451448	789624	7	342,109,102,83,68,135,51,	0,1089,9891,23599,28789,36643,37124,
#Partially deleted in new
chr11	450326	460879	chr11:450326-460879	0	+	450326	450326	8553170	3	311,102,119,	0,9860,10434,
#Partially deleted in new
chr11	450346	479445	chr11:450346-479445	0	+	450346	450346	8553170	4	291,102,83,361,	0,9840,23548,28738,
#Partially deleted in new
chr11	450353	461051	chr11:450353-461051	0	+	450353	450353	8553170	3	284,109,865,	0,1031,9833,
#Partially deleted in new
chr11	450419	459111	chr11:450419-459111	0	+	450419	450419	8553170	2	218,251,	0,8441,
#Partially deleted in new
chr11	450450	479090	chr11:450450-479090	0	+	450455	451352	789624	5	187,142,102,83,6,	0,901,9736,23444,28634,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	458673	491399	chr11:458673-491399	0	+	458673	458673	8553170	12	1615,83,68,135,51,114,119,115,146,186,223,279,	0,15221,20411,28265,28746,29525,29855,30726,30914,31209,31746,32447,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	462929	463899	chr11:462929-463899	3	-	462929	462929	8553170	2	112,552,	0,418,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	473919	480594	chr11:473919-480594	0	+	473919	473919	8553170	3	58,68,470,	0,5165,6205,
#Deleted in new
chr11	487238	489730	chr11:487238-489730	0	+	487238	487238	8553170	5	232,114,119,115,143,	0,960,1290,2161,2349,
#Deleted in new
chr11	489349	490546	chr11:489349-490546	0	+	489349	489349	8553170	4	165,146,186,127,	0,238,533,1070,
#Deleted in new
chr11	489790	490720	chr11:489790-490720	0	+	489790	489790	8553170	2	278,301,	0,629,
#Partially deleted in new
chr11	494511	503570	chr11:494511-503570	1	-	494690	502162	0	9	267,171,171,171,171,171,171,171,1509,	0,371,3459,3945,4251,4503,5317,5972,7550,
#Partially deleted in new
chr11	494512	506821	chr11:494512-506821	1	-	494690	502162	0	10	266,171,171,171,171,171,171,171,188,213,	0,370,3458,3944,4250,4502,5316,5971,7549,12096,
#Partially deleted in new
chr11	494514	507253	chr11:494514-507253	1	-	494690	502162	0	10	264,171,171,171,171,171,171,171,120,141,	0,368,3456,3942,4248,4500,5314,5969,7547,12598,
#Partially deleted in new
chr11	494514	506800	chr11:494514-506800	1	-	494690	502162	0	11	264,171,171,171,171,171,171,171,188,173,192,	0,368,3456,3942,4248,4500,5314,5969,7547,10309,12094,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	494515	505881	chr11:494515-505881	0	-	494515	494515	8553170	9	263,171,171,171,171,985,171,120,1058,	0,367,3455,3941,4247,4499,5968,7546,10308,
#Partially deleted in new
chr11	494522	507257	chr11:494522-507257	0	-	500731	502162	789624	10	256,171,171,171,171,171,95,255,188,145,	0,360,3448,3934,4240,4492,5306,5961,7539,12590,
#Partially deleted in new
chr11	494543	498929	chr11:494543-498929	0	-	494704	498929	789624	4	510,171,171,167,	0,3427,3913,4219,
#Partially deleted in new
chr11	494545	507218	chr11:494545-507218	1	-	494690	502162	0	11	233,171,171,171,171,171,171,171,120,173,106,	0,337,3425,3911,4217,4469,5283,5938,7516,10278,12567,
#Partially deleted in new
chr11	494547	506785	chr11:494547-506785	1	-	494690	502162	0	10	231,171,171,171,171,171,171,171,120,177,	0,335,3423,3909,4215,4467,5281,5936,7514,12061,
#Partially deleted in new
chr11	494551	507221	chr11:494551-507221	1	-	494690	502162	0	11	227,171,171,171,171,171,171,171,188,173,109,	0,331,3419,3905,4211,4463,5277,5932,7510,10272,12561,
#Partially deleted in new
chr11	494560	507300	chr11:494560-507300	3	-	494690	502162	0	10	218,171,171,171,171,171,171,171,188,188,	0,322,3410,3896,4202,4454,5268,5923,7501,12552,
#Partially deleted in new
chr11	495007	507227	chr11:495007-507227	0	-	498495	502162	789624	6	46,171,59,113,120,115,	0,2963,3449,5534,7054,12105,
#Partially deleted in new
chr11	498787	507264	chr11:498787-507264	0	-	499045	502162	789624	6	146,171,95,171,120,152,	0,227,1041,1696,3274,8325,
#Partially deleted in new
chr11	499030	506796	chr11:499030-506796	0	-	499030	502162	789624	5	155,171,171,188,188,	0,798,1453,3031,7578,
#Partially deleted in new
chr11	499046	504552	chr11:499046-504552	0	-	499046	502162	789624	5	139,171,171,120,126,	0,782,1437,3015,5380,
#Partially deleted in new
chr11	499061	506759	chr11:499061-506759	0	-	499061	502162	789624	6	124,171,171,188,65,151,	0,767,1422,3000,5762,7547,
#Partially deleted in new
chr11	499399	507212	chr11:499399-507212	0	-	499399	499399	8553170	4	600,171,188,100,	0,1084,2662,7713,
#Partially deleted in new
chr11	499500	507259	chr11:499500-507259	0	-	499500	502162	789624	5	100,171,171,120,147,	0,328,983,2561,7612,
#Partially deleted in new
chr11	499676	502215	chr11:499676-502215	0	-	499676	499676	8553170	3	247,171,154,	0,807,2385,
#Partially deleted in new
chr11	499896	507195	chr11:499896-507195	0	-	499896	499896	8553170	4	758,188,173,83,	0,2165,4927,7216,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	500634	506316	chr11:500634-506316	0	-	500634	502162	789624	5	20,188,173,84,239,	0,1427,4189,4743,5443,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	500839	503183	chr11:500839-503183	0	-	500839	500839	8553170	1	2344,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	502136	506339	chr11:502136-506339	0	-	502136	502162	789624	3	45,173,262,	0,2687,3941,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	502213	506356	chr11:502213-506356	0	-	502213	502213	8553170	3	36,173,279,	0,2610,3864,
#Deleted in new
chr11	528906	529659	chr11:528906-529659	3	+	528906	528906	8553170	2	41,506,	0,247,
#Deleted in new
chr11	532241	534375	chr11:532241-534375	1	-	533295	534322	0	5	514,82,160,179,164,	0,1035,1211,1524,1970,
#Deleted in new
chr11	532241	535339	chr11:532241-535339	1	-	532635	534322	0	5	514,160,179,164,83,	0,1211,1524,1970,3015,
#Deleted in new
chr11	532241	533612	chr11:532241-533612	0	-	532241	532241	8553170	3	389,82,160,	0,1035,1211,
#Deleted in new
chr11	532241	535538	chr11:532241-535538	0	-	533295	534322	0	7	281,125,82,160,179,164,123,	0,389,1035,1211,1524,1970,3174,
#Deleted in new
chr11	532242	535550	chr11:532242-535550	1	-	533295	534322	0	6	513,82,160,179,164,135,	0,1034,1210,1523,1969,3173,
#Deleted in new
chr11	532242	535550	chr11:532242-535550	3	-	532635	534322	0	5	513,160,179,164,135,	0,1210,1523,1969,3173,
#Deleted in new
chr11	532245	533595	chr11:532245-533595	0	-	532245	532245	8553170	4	277,125,82,143,	0,385,1031,1207,
#Deleted in new
chr11	532375	535534	chr11:532375-535534	1	-	532635	534322	0	6	147,125,160,179,164,119,	0,255,1077,1390,1836,3040,
#Deleted in new
chr11	532641	533976	chr11:532641-533976	0	-	532641	532641	8553170	3	114,160,211,	0,811,1124,
#Partially deleted in new
chr11	533794	537287	chr11:533794-537287	0	-	533794	533794	8553170	3	150,164,435,	0,417,3058,
#Deleted in new
chr11	534278	534587	chr11:534278-534587	0	-	534278	534278	8553170	2	97,70,	0,239,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr11	537526	554916	chr11:537526-554916	3	+	540684	554276	789624	14	79,263,147,188,88,61,97,201,172,177,65,143,134,954,	0,1071,2053,3147,4010,7193,12375,12545,13604,14124,14376,14563,15042,16436,
#Deleted in new
chr11	554854	556420	chr11:554854-556420	0	-	554854	554854	8553170	4	257,626,120,229,	0,450,1141,1337,
#Deleted in new
chr11	554863	560779	chr11:554863-560779	3	-	554979	560716	789624	14	248,199,197,120,184,97,263,89,69,156,88,153,124,97,	0,441,870,1132,1328,1628,1971,2535,2708,3020,3297,3750,3992,5819,
#Deleted in new
chr11	556925	560730	chr11:556925-560730	0	-	556925	559401	789624	9	172,89,69,156,88,153,124,152,48,	0,473,646,958,1235,1688,1930,2421,3757,
#Deleted in new
chr11	557398	559382	chr11:557398-559382	0	-	557398	559043	789624	7	89,69,156,88,153,207,36,	0,173,485,762,1215,1457,1948,
#Deleted in new
chr11	557594	560106	chr11:557594-560106	3	+	557594	557594	8553170	2	1882,328,	0,2184,
#Deleted in new
chr11	558475	560143	chr11:558475-560143	0	-	558475	558475	8553170	3	309,124,175,	0,380,1493,
#Deleted in new
chr11	558891	560106	chr11:558891-560106	1	+	558891	558891	8553170	3	43,156,328,	0,429,887,
#Deleted in new
chr11	559475	560107	chr11:559475-560107	0	+	559475	559475	8553170	2	208,329,	0,303,
#Deleted in new
chr11	560403	563993	chr11:560403-563993	1	+	561768	563380	789624	4	111,131,698,805,	0,1358,1675,2785,
#Deleted in new
chr11	560955	564012	chr11:560955-564012	1	+	561768	563380	789624	4	78,131,698,824,	0,806,1123,2233,
#Deleted in new
chr11	560970	563980	chr11:560970-563980	0	+	561768	562322	789624	4	63,131,693,792,	0,791,1113,2218,
#Deleted in new
chr11	560986	562456	chr11:560986-562456	0	+	560986	560986	8553170	2	47,378,	0,1092,
#Deleted in new
chr11	561051	564018	chr11:561051-564018	3	+	561768	563645	789624	6	426,131,698,129,83,461,	0,710,1027,2137,2344,2506,
#Deleted in new
chr11	561449	564021	chr11:561449-564021	1	+	561768	563569	789624	5	28,131,698,129,464,	0,312,629,1739,2108,
#Deleted in new
chr11	561546	562205	chr11:561546-562205	0	+	561768	562205	789624	2	346,127,	0,532,
#Deleted in new
chr11	562384	563685	chr11:562384-563685	0	+	562384	563380	789624	3	392,290,128,	0,804,1173,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	565659	568420	chr11:565659-568420	3	-	565659	565659	789624	2	1896,69,	0,2692,
#Deleted in new
chr11	567082	568408	chr11:567082-568408	0	-	567082	567082	8553170	2	602,57,	0,1269,
#Deleted in new
chr11	567143	568457	chr11:567143-568457	1	-	567143	567143	8553170	2	710,106,	0,1208,
#Deleted in new
chr11	567525	568369	chr11:567525-568369	0	-	567525	567525	8553170	2	328,39,	0,805,
#Deleted in new
chr11	568088	568198	chr11:568088-568198	3	-	568088	568088	5263520	1	110,	0,
#Partially deleted in new
chr11	576485	612222	chr11:576485-612222	1	+	581512	611777	789624	18	107,115,120,206,84,116,98,176,130,128,182,120,155,2655,152,261,129,589,	0,5006,5476,10773,14898,16073,20437,20909,21887,25088,28633,29119,29956,30580,33710,34015,34468,35148,
#Partially deleted in new
chr11	576485	612043	chr11:576485-612043	0	+	581512	610735	789624	18	107,115,120,206,84,116,98,176,130,128,182,120,155,2655,152,95,129,410,	0,5006,5476,10773,14898,16073,20437,20909,21887,25088,28633,29119,29956,30580,33710,34181,34468,35148,
#Partially deleted in new
chr11	576520	611964	chr11:576520-611964	1	+	581512	611777	789624	18	72,115,117,206,84,116,98,176,130,128,182,117,155,2655,152,261,129,331,	0,4971,5444,10738,14863,16038,20402,20874,21852,25053,28598,29087,29921,30545,33675,33980,34433,35113,
#Partially deleted in new
chr11	576520	611964	chr11:576520-611964	3	+	581512	611777	789624	18	72,115,120,206,84,116,98,176,130,128,182,117,155,2655,152,261,129,331,	0,4971,5441,10738,14863,16038,20402,20874,21852,25053,28598,29087,29921,30545,33675,33980,34433,35113,
#Partially deleted in new
chr11	576520	611964	chr11:576520-611964	1	+	581512	611777	789624	18	72,106,117,206,84,116,98,176,130,128,182,120,155,2655,152,261,129,331,	0,4971,5444,10738,14863,16038,20402,20874,21852,25053,28598,29084,29921,30545,33675,33980,34433,35113,
#Partially deleted in new
chr11	601656	606842	chr11:601656-606842	0	+	601656	601656	8553170	4	45,182,120,401,	0,3462,3948,4785,
#Deleted in new
chr11	612552	615999	chr11:612552-615999	1	-	612644	615364	0	11	248,119,390,81,87,226,59,211,163,303,87,	0,446,653,1232,1398,1621,1923,2244,2544,2792,3360,
#Deleted in new
chr11	612552	615252	chr11:612552-615252	0	-	614972	615252	8553170	9	248,119,390,81,87,226,59,188,156,	0,446,653,1232,1398,1621,1923,2244,2544,
#Deleted in new
chr11	612554	615921	chr11:612554-615921	1	-	612644	615364	0	10	246,119,390,81,226,59,211,163,303,9,	0,444,651,1230,1619,1921,2242,2542,2790,3358,
#Deleted in new
chr11	612554	615728	chr11:612554-615728	1	-	612644	615318	0	9	246,119,390,81,87,226,59,211,632,	0,444,651,1230,1396,1619,1921,2242,2542,
#Deleted in new
chr11	612554	615950	chr11:612554-615950	1	-	612644	615364	789624	11	246,119,390,81,87,226,59,211,163,303,38,	0,444,651,1230,1396,1619,1921,2242,2542,2790,3358,
#Deleted in new
chr11	612560	615950	chr11:612560-615950	0	-	613995	615364	0	9	240,119,390,253,59,211,163,303,38,	0,438,645,1224,1915,2236,2536,2784,3352,
#Deleted in new
chr11	612575	615728	chr11:612575-615728	1	-	612644	615318	789624	8	225,119,390,81,226,59,211,632,	0,423,630,1209,1598,1900,2221,2521,
#Deleted in new
chr11	612582	615612	chr11:612582-615612	0	-	613995	615364	0	9	218,119,390,81,87,59,211,163,268,	0,416,623,1202,1368,1893,2214,2514,2762,
#Deleted in new
chr11	612587	613591	chr11:612587-613591	0	-	612587	612587	8553170	2	213,593,	0,411,
#Deleted in new
chr11	612590	615970	chr11:612590-615970	3	-	612644	615318	0	10	210,119,390,81,87,226,59,211,551,58,	0,408,615,1194,1360,1583,1885,2206,2506,3322,
#Deleted in new
chr11	612590	615983	chr11:612590-615983	0	-	613568	615364	789624	9	210,119,390,81,56,211,163,303,71,	0,408,615,1194,1885,2206,2506,2754,3322,
#Deleted in new
chr11	613552	614397	chr11:613552-614397	0	-	613552	613552	8553170	2	43,613,	0,232,
#Deleted in new
chr11	613821	615979	chr11:613821-615979	0	-	613995	615318	789624	6	44,87,59,211,551,67,	0,129,654,975,1275,2091,
#Deleted in new
chr11	614008	614887	chr11:614008-614887	0	-	614008	614008	8553170	2	526,91,	0,788,
#Deleted in new
chr11	614089	615650	chr11:614089-615650	0	-	614089	614089	8553170	5	310,59,211,163,306,	0,386,707,1007,1255,
#Deleted in new
chr11	614387	615647	chr11:614387-615647	0	-	614387	615364	8553170	5	12,56,211,163,303,	0,88,409,709,957,
#Deleted in new
chr11	614482	615724	chr11:614482-615724	0	-	614482	615318	8553170	3	52,211,628,	0,314,614,
#Deleted in new
chr11	614782	615938	chr11:614782-615938	0	-	614871	615364	789624	3	477,303,26,	0,562,1130,
#Partially deleted in new
chr11	616564	625067	chr11:616564-625067	1	-	617350	624902	789624	15	1206,158,582,85,114,201,98,91,171,111,102,93,51,176,250,	0,1389,2034,2741,2909,3116,3502,3731,4515,4780,4997,5247,7648,7992,8253,
#Partially deleted in new
chr11	616576	626078	chr11:616576-626078	3	-	617350	624902	789624	16	1194,158,582,85,114,201,98,91,171,111,102,93,51,176,350,58,	0,1377,2022,2729,2897,3104,3490,3719,4503,4768,4985,5235,7636,7980,8241,9444,
#Partially deleted in new
chr11	617255	625169	chr11:617255-625169	1	-	617350	624902	789624	14	515,158,85,114,201,98,91,171,111,102,93,51,176,352,	0,698,2050,2218,2425,2811,3040,3824,4089,4306,4556,6957,7301,7562,
#Partially deleted in new
chr11	617255	624932	chr11:617255-624932	0	-	624356	624902	789624	15	515,158,582,85,114,201,98,91,171,111,102,93,204,176,115,	0,698,1343,2050,2218,2425,2811,3040,3824,4089,4306,4556,6957,7301,7562,
#Partially deleted in new
chr11	619415	624955	chr11:619415-624955	0	-	619415	619415	8553170	10	172,201,98,91,171,111,102,51,176,138,	0,265,651,880,1664,1929,2146,4797,5141,5402,
#Deleted in new
chr11	619687	621137	chr11:619687-621137	0	-	619687	619687	8553170	4	194,65,91,58,	0,379,608,1392,
#Partially deleted in new
chr11	621216	624955	chr11:621216-624955	0	-	621216	624902	789624	6	47,111,102,51,176,138,	0,128,345,2996,3340,3601,
#Partially deleted in new
chr11	621396	624955	chr11:621396-624955	0	-	621396	624902	789624	6	59,102,24,51,176,138,	0,165,415,2816,3160,3421,
#Partially deleted in new
chr11	621419	624955	chr11:621419-624955	0	-	621419	621570	789624	6	36,102,93,51,176,38,	0,142,392,2793,3137,3498,
#Deleted in new
chr11	624212	625169	chr11:624212-625169	0	-	624212	624212	8553170	3	51,176,200,	0,344,757,
#Deleted in new
chr11	626430	627143	chr11:626430-627143	3	-	626430	627143	789624	4	100,93,102,71,	0,266,457,642,
#Partially deleted in new
chr11	637292	640706	chr11:637292-640706	3	+	637304	640603	789624	4	297,113,659,306,	0,2140,2355,3108,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	639056	639793	chr11:639056-639793	0	+	639056	639056	8553170	3	102,113,146,	0,376,591,
#Partially deleted in new
chr11	644232	695532	chr11:644232-695532	3	-	644549	695047	0	12	422,90,248,129,129,127,66,140,147,130,98,774,	0,9729,30303,34461,35455,36730,40665,42625,43678,44098,47268,50526,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	644232	687936	chr11:644232-687936	0	-	651314	687936	789624	10	422,246,90,248,129,129,127,66,140,26,	0,6929,9729,30303,34461,35455,36730,40665,42625,43678,
#Partially deleted in new
chr11	644233	646596	chr11:644233-646596	0	-	644233	644233	8553170	2	421,270,	0,2093,
#Partially deleted in new
chr11	653940	681045	chr11:653940-681045	0	-	653940	653940	8553170	6	111,248,129,129,97,83,	0,20595,24753,25747,26037,27022,
#Partially deleted in new
chr11	653961	684971	chr11:653961-684971	0	-	653961	653961	8553170	5	90,248,129,127,74,	0,20574,25726,27001,30936,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	665909	678391	chr11:665909-678391	3	+	665909	665909	8553170	3	581,262,69,	0,8088,12413,
#Partially deleted in new
chr11	674371	678779	chr11:674371-678779	0	-	674371	674371	8553170	2	412,86,	0,4322,
#Partially deleted in new
chr11	686920	694931	chr11:686920-694931	0	-	691592	694931	789624	5	77,147,130,98,253,	0,990,1410,4580,7758,
#Partially deleted in new
chr11	686931	706715	chr11:686931-706715	0	-	686931	686931	8553170	5	66,147,130,98,144,	0,979,1399,4569,19640,
#Partially deleted in new
chr11	686971	693644	chr11:686971-693644	0	-	686971	686971	8553170	5	26,147,130,98,156,	0,939,1359,4529,6517,
#Partially deleted in new
chr11	687911	692350	chr11:687911-692350	0	-	687911	687911	8553170	4	146,130,98,101,	0,419,3589,4338,
#Partially deleted in new
chr11	689662	691597	chr11:689662-691597	0	-	689662	689662	8553170	2	151,97,	0,1838,
#Partially deleted in new
chr11	694437	720212	chr11:694437-720212	0	+	709407	720212	789624	6	38,148,122,56,65,151,	0,11703,14892,15115,15984,25624,
#Partially deleted in new
chr11	695427	703412	chr11:695427-703412	3	+	695608	703150	789624	5	419,20,94,93,468,	0,3441,4714,5187,7517,
#Partially deleted in new
chr11	695590	704127	chr11:695590-704127	1	+	695608	703735	789624	4	256,20,71,453,	0,3278,4551,8084,
#Partially deleted in new
chr11	695642	704129	chr11:695642-704129	1	+	695752	703150	789624	5	180,20,94,93,1185,	0,3226,4499,4972,7302,
#Partially deleted in new
chr11	695795	705028	chr11:695795-705028	0	+	695795	704646	789624	6	51,20,94,93,202,587,	0,3073,4346,4819,7149,8646,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	695801	704121	chr11:695801-704121	0	+	695801	695801	8553170	5	45,1367,93,202,340,	0,3067,4813,7143,7980,
#Partially deleted in new
chr11	695804	701127	chr11:695804-701127	0	+	695804	700745	789624	4	42,20,94,513,	0,3064,4337,4810,
#Partially deleted in new
chr11	697485	706624	chr11:697485-706624	0	-	697485	697485	8553170	2	514,53,	0,9086,
#Deleted in new
chr11	703006	704129	chr11:703006-704129	0	+	703006	703006	8553170	2	140,330,	0,793,
#Deleted in new
chr11	705216	709584	chr11:705216-709584	0	+	709407	709584	789624	4	238,148,122,32,	0,924,4113,4336,
#Partially deleted in new
chr11	706112	727727	chr11:706112-727727	3	+	709407	726981	0	21	176,122,56,65,162,150,80,143,68,127,89,75,149,133,113,106,120,73,181,133,827,	0,3217,3440,4309,13949,14484,14717,14951,15172,15452,15790,15978,16288,16560,17128,18611,19615,19985,20191,20506,20788,
#Partially deleted in new
chr11	706116	727724	chr11:706116-727724	1	+	709407	726981	0	22	172,125,122,56,65,162,150,80,143,68,127,89,75,149,133,113,106,120,73,181,133,824,	0,560,3213,3436,4305,13945,14480,14713,14947,15168,15448,15786,15974,16284,16556,17124,18607,19611,19981,20187,20502,20784,
#Partially deleted in new
chr11	706119	727726	chr11:706119-727726	1	+	709407	726981	0	21	169,122,56,65,162,198,80,143,68,127,89,75,149,133,113,106,120,73,181,133,826,	0,3210,3433,4302,13942,14429,14710,14944,15165,15445,15783,15971,16281,16553,17121,18604,19608,19978,20184,20499,20781,
#Partially deleted in new
chr11	706200	720135	chr11:706200-720135	0	+	709407	720135	789624	6	88,69,122,56,65,74,	0,2374,3129,3352,4221,13861,
#Partially deleted in new
chr11	706202	722302	chr11:706202-722302	0	+	706202	706202	8553170	10	86,122,56,65,162,198,80,143,68,738,	0,3127,3350,4219,13859,14346,14627,14861,15082,15362,
#Partially deleted in new
chr11	706215	727692	chr11:706215-727692	1	+	709407	727656	8553170	21	73,122,56,65,162,150,80,143,68,127,89,75,149,133,113,106,120,73,181,133,336,	0,3114,3337,4206,13846,14381,14614,14848,15069,15349,15687,15875,16185,16457,17025,18508,19512,19882,20088,20403,21141,
#Partially deleted in new
chr11	706223	727721	chr11:706223-727721	0	+	709407	709616	789624	20	65,122,934,162,150,80,143,68,127,89,75,149,133,113,106,120,73,181,133,821,	0,3106,3329,13838,14373,14606,14840,15061,15341,15679,15867,16177,16449,17017,18500,19504,19874,20080,20395,20677,
#Deleted in new
chr11	706230	709795	chr11:706230-709795	0	+	706230	706230	8553170	4	58,128,122,243,	0,443,3099,3322,
#Deleted in new
chr11	706230	710482	chr11:706230-710482	0	+	706230	706230	8553170	4	58,122,56,178,	0,3099,3322,4074,
#Partially deleted in new
chr11	706236	720147	chr11:706236-720147	0	+	709407	720147	789624	6	52,206,122,56,65,86,	0,359,3093,3316,4185,13825,
#Partially deleted in new
chr11	706241	720191	chr11:706241-720191	0	+	706241	706241	8553170	5	47,122,56,459,130,	0,3088,3311,3786,13820,
#Partially deleted in new
chr11	706594	720181	chr11:706594-720181	0	+	709407	720181	789624	5	219,122,56,65,120,	0,2735,2958,3827,13467,
#Deleted in new
chr11	706615	709789	chr11:706615-709789	0	+	706615	706615	8553170	3	186,122,237,	0,2714,2937,
#Partially deleted in new
chr11	706628	727051	chr11:706628-727051	1	+	709407	726981	0	21	173,122,56,65,162,150,80,143,68,127,89,75,149,133,113,106,120,73,181,133,151,	0,2701,2924,3793,13433,13968,14201,14435,14656,14936,15274,15462,15772,16044,16612,18095,19099,19469,19675,19990,20272,
#Partially deleted in new
chr11	708563	727047	chr11:708563-727047	3	-	708563	708563	8553170	2	460,72,	0,18412,
#Partially deleted in new
chr11	709367	727034	chr11:709367-727034	1	+	709407	726981	0	20	84,56,65,162,198,80,143,68,127,89,75,149,133,113,106,120,73,181,133,134,	0,185,1054,10694,11181,11462,11696,11917,12197,12535,12723,13033,13305,13873,15356,16360,16730,16936,17251,17533,
#Partially deleted in new
chr11	709559	720899	chr11:709559-720899	0	+	709559	709559	8553170	5	49,130,162,150,70,	0,797,10502,11037,11270,
#Deleted in new
chr11	720605	722584	chr11:720605-722584	0	+	720605	720605	8553170	8	141,80,143,68,127,89,75,184,	0,224,458,679,959,1297,1485,1795,
#Deleted in new
chr11	720971	721631	chr11:720971-721631	0	+	720971	720971	8553170	2	381,67,	0,593,
#Deleted in new
chr11	721018	722500	chr11:721018-722500	0	+	721018	721018	8553170	5	188,68,127,89,100,	0,266,546,884,1382,
#Deleted in new
chr11	721072	721800	chr11:721072-721800	0	+	721072	721072	8553170	3	115,68,236,	0,212,492,
#Partially deleted in new
chr11	721074	727723	chr11:721074-727723	0	+	721074	722501	789624	13	132,68,127,75,149,133,113,106,120,73,181,133,823,	0,210,490,1016,1326,1598,2166,3649,4653,5023,5229,5544,5826,
#Deleted in new
chr11	721084	723345	chr11:721084-723345	0	+	721084	722501	789624	6	122,68,127,149,133,105,	0,200,480,1316,1588,2156,
#Deleted in new
chr11	721281	722343	chr11:721281-722343	0	+	721281	721281	8553170	4	71,127,89,253,	0,283,621,809,
#Partially deleted in new
chr11	721925	727721	chr11:721925-727721	0	+	721925	721925	8553170	9	624,133,113,106,120,73,181,133,821,	0,747,1315,2798,3802,4172,4378,4693,4975,
#Partially deleted in new
chr11	721925	727048	chr11:721925-727048	1	+	722505	726411	789624	10	624,133,113,106,120,9,66,181,133,148,	0,747,1315,2798,3802,4168,4179,4378,4693,4975,
#Partially deleted in new
chr11	724561	727722	chr11:724561-727722	0	+	724561	724561	8553170	6	268,120,73,181,133,822,	0,1166,1536,1742,2057,2339,
#Deleted in new
chr11	726080	727113	chr11:726080-727113	0	+	726080	726080	8553170	3	404,133,213,	0,538,820,
#Deleted in new
chr11	726560	727051	chr11:726560-727051	0	+	726560	726560	8553170	2	191,151,	0,340,
#Deleted in new
chr11	726626	727722	chr11:726626-727722	0	+	726626	726626	8553170	2	125,366,	0,730,
#Deleted in new
chr11	726953	727658	chr11:726953-727658	0	+	726953	726953	8553170	2	101,302,	0,403,
#Partially deleted in new
chr11	747328	765024	chr11:747328-765024	3	+	747481	764845	0	8	250,124,108,132,176,198,146,212,	0,8550,11621,12793,16015,16418,16959,17484,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	747414	763520	chr11:747414-763520	0	+	747481	752319	789624	6	164,210,124,49,132,177,	0,4849,8464,11594,12707,15929,
#Partially deleted in new
chr11	747416	756284	chr11:747416-756284	0	+	747416	747416	8553170	2	162,406,	0,8462,
#Partially deleted in new
chr11	747427	765012	chr11:747427-765012	1	+	747481	764413	789624	8	151,124,108,132,176,194,146,200,	0,8451,11522,12694,15916,16319,16860,17385,
#Partially deleted in new
chr11	747453	763850	chr11:747453-763850	0	+	747481	760133	789624	6	125,124,49,132,176,104,	0,8425,11555,12668,15890,16293,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	747463	760965	chr11:747463-760965	0	+	747463	747463	8553170	4	115,124,108,844,	0,8415,11486,12658,
#Partially deleted in new
chr11	755743	760257	chr11:755743-760257	0	+	755743	755743	8553170	3	259,108,136,	0,3206,4378,
#Deleted in new
chr11	763981	764947	chr11:763981-764947	0	+	763981	763981	8553170	2	452,135,	0,831,
#Deleted in new
chr11	764369	765005	chr11:764369-765005	0	+	764369	764369	8553170	2	77,193,	0,443,
#Partially deleted in new
chr11	767219	771427	chr11:767219-771427	0	-	770343	771427	789624	4	154,85,112,95,	0,3094,3773,4113,
#Partially deleted in new
chr11	767221	777471	chr11:767221-777471	1	-	767249	777462	789624	8	152,85,94,95,108,106,77,73,	0,3092,4111,5205,6300,6786,7844,10177,
#Partially deleted in new
chr11	767221	774068	chr11:767221-774068	0	-	767242	774068	789624	5	152,94,95,108,61,	0,4111,5205,6300,6786,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	767224	777484	chr11:767224-777484	3	-	770896	777462	789624	8	3679,112,94,95,108,106,77,86,	0,3768,4108,5202,6297,6783,7841,10174,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	767224	777488	chr11:767224-777488	0	-	770896	777462	789624	8	3174,225,112,94,95,106,77,90,	0,3454,3768,4108,5202,6783,7841,10174,
#Partially deleted in new
chr11	767227	777487	chr11:767227-777487	1	-	771356	777462	789624	7	146,135,95,108,106,77,89,	0,4105,5199,6294,6780,7838,10171,
#Partially deleted in new
chr11	767227	774026	chr11:767227-774026	0	-	767249	774026	789624	5	141,94,95,108,19,	0,4105,5199,6294,6780,
#Partially deleted in new
chr11	770469	777475	chr11:770469-777475	1	-	770896	777462	789624	7	434,112,94,95,106,77,77,	0,523,863,1957,3538,4596,6929,
#Partially deleted in new
chr11	770549	777485	chr11:770549-777485	0	-	770549	770549	8553170	5	877,95,108,106,87,	0,1877,2972,3458,6849,
#Deleted in new
chr11	770697	772614	chr11:770697-772614	0	-	770697	770697	8553170	4	206,112,94,188,	0,295,635,1729,
#Partially deleted in new
chr11	770811	777483	chr11:770811-777483	0	-	770811	770811	789624	7	92,220,94,95,108,106,85,	0,181,521,1615,2710,3196,6587,
#Partially deleted in new
chr11	770811	777483	chr11:770811-777483	0	-	773513	777462	789624	8	92,112,94,95,202,106,77,85,	0,181,521,1615,2616,3196,4254,6587,
#Deleted in new
chr11	770843	771370	chr11:770843-771370	0	-	770843	770843	8553170	2	261,38,	0,489,
#Partially deleted in new
chr11	771034	777484	chr11:771034-777484	0	-	771034	771034	8553170	6	70,94,95,108,106,86,	0,298,1392,2487,2973,6364,
#Partially deleted in new
chr11	773329	777484	chr11:773329-777484	0	-	773329	773329	8553170	4	300,106,77,86,	0,678,1736,4069,
#Partially deleted in new
chr11	775064	777179	chr11:775064-777179	0	-	775064	775064	8553170	2	78,500,	0,1615,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	777581	784180	chr11:777581-784180	1	+	777581	777581	789624	2	114,651,	0,5948,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	777607	784297	chr11:777607-784297	3	+	777607	777607	789624	4	88,106,142,274,	0,505,5922,6416,
#Deleted in new
chr11	779616	780755	chr11:779616-780755	0	+	779616	779616	8553170	1	1139,	0,
#Deleted in new
chr11	780116	780755	chr11:780116-780755	7	+	780116	780116	16724991	3	39,510,87,	0,40,552,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	781644	782105	chr11:781644-782105	3	+	781644	781644	8553170	2	106,178,	0,283,
#Deleted in new
chr11	787103	790123	chr11:787103-790123	3	-	788126	788576	789624	2	1555,94,	0,2926,
#Deleted in new
chr11	788177	790113	chr11:788177-790113	0	-	788177	788177	8553170	2	388,84,	0,1852,
#Deleted in new
chr11	790474	796263	chr11:790474-796263	1	-	791914	795006	789624	10	1594,76,155,175,119,91,56,126,183,221,	0,1667,1829,2078,2395,3054,3983,4301,4512,5568,
#Deleted in new
chr11	790474	798333	chr11:790474-798333	3	-	791914	795006	789624	10	1594,76,155,175,119,91,56,126,183,117,	0,1667,1829,2078,2395,3054,3983,4301,4512,7742,
#Deleted in new
chr11	791643	797995	chr11:791643-797995	1	-	791914	795006	789624	10	425,76,155,175,119,91,56,126,183,384,	0,498,660,909,1226,1885,2814,3132,3343,5968,
#Deleted in new
chr11	792022	795175	chr11:792022-795175	0	-	792022	795006	789624	9	46,76,155,175,119,91,131,126,189,	0,119,281,530,847,1506,2435,2753,2964,
#Deleted in new
chr11	792304	795286	chr11:792304-795286	0	-	792304	795006	789624	7	154,175,119,91,56,126,300,	0,248,565,1224,2153,2471,2682,
#Deleted in new
chr11	792361	793689	chr11:792361-793689	0	-	792361	792361	8553170	4	97,175,119,161,	0,191,508,1167,
#Deleted in new
chr11	792444	798271	chr11:792444-798271	0	-	792444	795006	789624	8	14,175,119,91,44,126,178,55,	0,108,425,1084,2025,2331,2542,5772,
#Deleted in new
chr11	792454	795470	chr11:792454-795470	0	-	792454	795006	789624	8	4,175,119,91,56,126,183,62,	0,98,415,1074,2003,2321,2532,2954,
#Deleted in new
chr11	792569	797997	chr11:792569-797997	0	-	792569	795006	789624	7	158,119,91,56,126,183,106,	0,300,959,1888,2206,2417,5322,
#Deleted in new
chr11	792608	796250	chr11:792608-796250	0	-	792608	795006	789624	7	119,119,91,56,126,183,47,	0,261,920,1849,2167,2378,3595,
#Deleted in new
chr11	792615	797998	chr11:792615-797998	0	-	793607	795006	789624	7	112,119,91,61,126,183,387,	0,254,913,1837,2160,2371,4996,
#Deleted in new
chr11	792655	796185	chr11:792655-796185	0	-	792655	795006	789624	7	72,119,91,56,126,183,99,	0,214,873,1802,2120,2331,3431,
#Deleted in new
chr11	792671	795705	chr11:792671-795705	0	-	792671	795006	789624	7	56,119,91,56,126,183,193,	0,198,857,1786,2104,2315,2841,
#Deleted in new
chr11	792720	798270	chr11:792720-798270	0	-	793607	795006	789624	7	7,119,91,61,126,183,54,	0,149,808,1732,2055,2266,5496,
#Deleted in new
chr11	792878	795363	chr11:792878-795363	0	-	792878	795006	789624	6	110,91,56,126,183,100,	0,650,1579,1897,2108,2385,
#Deleted in new
chr11	792899	795364	chr11:792899-795364	0	-	792899	795006	789624	6	89,91,56,126,178,25,	0,629,1558,1876,2087,2440,
#Deleted in new
chr11	792921	795394	chr11:792921-795394	0	-	793607	795006	789624	6	67,91,61,126,183,55,	0,607,1531,1854,2065,2418,
#Deleted in new
chr11	792928	796240	chr11:792928-796240	0	-	792928	795006	789624	6	60,91,56,126,178,198,	0,600,1529,1847,2058,3114,
#Deleted in new
chr11	792937	795438	chr11:792937-795438	0	-	792937	795006	789624	6	51,91,56,126,183,99,	0,591,1520,1838,2049,2402,
#Deleted in new
chr11	792971	796203	chr11:792971-796203	0	-	792971	795006	789624	6	17,91,56,126,183,96,	0,557,1486,1804,2015,3136,
#Deleted in new
chr11	793477	798269	chr11:793477-798269	0	-	793477	793477	8553170	5	142,56,126,183,53,	0,980,1298,1509,4739,
#Deleted in new
chr11	793529	796237	chr11:793529-796237	0	-	793529	795006	789624	5	90,56,126,183,124,	0,928,1246,1457,2584,
#Deleted in new
chr11	793576	796237	chr11:793576-796237	0	-	793576	793576	8553170	5	43,61,126,183,195,	0,876,1199,1410,2466,
#Deleted in new
chr11	793586	795677	chr11:793586-795677	0	-	793586	795006	789624	5	33,56,126,178,165,	0,871,1189,1400,1926,
#Deleted in new
chr11	793904	796255	chr11:793904-796255	0	-	793904	793904	8553170	4	609,126,183,52,	0,871,1082,2299,
#Deleted in new
chr11	794260	795193	chr11:794260-795193	0	-	794260	794260	8553170	3	253,126,207,	0,515,726,
#Deleted in new
chr11	794368	795419	chr11:794368-795419	0	-	794368	794368	8553170	4	145,126,183,80,	0,407,618,971,
#Deleted in new
chr11	794402	796200	chr11:794402-796200	0	-	794402	794402	8553170	4	111,126,183,158,	0,373,584,1640,
#Deleted in new
chr11	794405	795419	chr11:794405-795419	0	-	794405	794405	8553170	4	108,126,178,80,	0,370,581,934,
#Deleted in new
chr11	794453	796215	chr11:794453-796215	0	-	794453	794453	8553170	4	60,126,178,173,	0,322,533,1589,
#Deleted in new
chr11	794462	798267	chr11:794462-798267	0	-	794462	795006	789624	5	51,126,183,325,51,	0,313,524,1580,3754,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	797510	799190	chr11:797510-799190	3	+	797625	798273	789624	1	1680,	0,
#Deleted in new
chr11	799178	804675	chr11:799178-804675	0	-	803615	804388	789624	15	387,200,114,119,124,151,103,148,180,126,202,55,210,474,582,	0,636,952,1154,1364,1583,1839,2039,2266,2786,3016,3364,3503,3995,4915,
#Deleted in new
chr11	799179	805103	chr11:799179-805103	0	-	803615	804388	789624	14	386,200,114,119,124,151,136,148,180,126,202,55,966,1010,	0,635,951,1153,1363,1582,1805,2038,2265,2785,3015,3363,3502,4914,
#Deleted in new
chr11	799183	805245	chr11:799183-805245	3	-	799306	804388	0	16	382,200,114,119,124,151,136,148,180,126,202,55,210,414,370,67,	0,631,947,1149,1359,1578,1801,2034,2261,2781,3011,3359,3498,3990,4910,5995,
#Deleted in new
chr11	799183	804469	chr11:799183-804469	1	-	799306	804388	0	15	382,200,114,68,124,151,136,148,180,126,202,55,210,414,376,	0,631,947,1200,1359,1578,1801,2034,2261,2781,3011,3359,3498,3990,4910,
#Deleted in new
chr11	799184	805230	chr11:799184-805230	0	-	799184	799184	8553170	10	1060,68,124,359,148,646,202,55,1782,52,	0,1199,1358,1577,2033,2260,3010,3358,3497,5994,
#Deleted in new
chr11	799184	802750	chr11:799184-802750	0	-	800795	802750	789624	13	381,200,114,68,124,151,119,148,180,126,202,55,69,	0,630,946,1199,1358,1577,1817,2033,2260,2780,3010,3358,3497,
#Partially deleted in new
chr11	799184	809499	chr11:799184-809499	0	-	799184	799184	8553170	12	381,430,119,124,359,148,180,126,202,55,1782,88,	0,630,1148,1358,1577,2033,2260,2780,3010,3358,3497,10227,
#Deleted in new
chr11	799325	802086	chr11:799325-802086	0	-	799325	799325	8553170	4	149,30,180,122,	0,2010,2119,2639,
#Deleted in new
chr11	802322	803149	chr11:802322-803149	0	-	802322	802322	8553170	3	54,55,468,	0,220,359,
#Partially deleted in new
chr11	803375	809523	chr11:803375-809523	0	-	803375	803375	8553170	3	272,370,112,	0,718,6036,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	805776	809753	chr11:805776-809753	0	-	805776	805776	8553170	2	319,342,	0,3635,
#Partially deleted in new
chr11	809646	812875	chr11:809646-812875	3	+	810234	812836	0	5	393,124,49,99,116,	0,587,1950,2888,3113,
#Partially deleted in new
chr11	809964	812880	chr11:809964-812880	0	+	809964	809964	8553170	4	84,49,99,121,	0,1632,2570,2795,
#Partially deleted in new
chr11	809983	812874	chr11:809983-812874	1	+	810234	812836	0	4	374,49,99,115,	0,1613,2551,2776,
#Partially deleted in new
chr11	810002	811839	chr11:810002-811839	0	+	810002	810002	8553170	2	355,243,	0,1594,
#Partially deleted in new
chr11	810268	812871	chr11:810268-812871	0	+	810268	812836	789624	4	53,49,99,112,	0,1328,2266,2491,
#Partially deleted in new
chr11	810397	812861	chr11:810397-812861	0	+	810397	810397	8553170	4	100,49,99,102,	0,1199,2137,2362,
#Deleted in new
chr11	811371	812875	chr11:811371-812875	0	+	811371	811371	8553170	3	274,99,116,	0,1163,1388,
#Deleted in new
chr11	811680	811814	chr11:811680-811814	3	+	811680	811680	789624	1	134,	0,
#Deleted in new
chr11	812078	812850	chr11:812078-812850	0	+	812078	812078	8553170	2	555,91,	0,681,
#Partially deleted in new
chr11	818901	825573	chr11:818901-825573	3	+	819718	824862	789624	10	57,332,233,66,210,61,162,133,123,1051,	0,672,2726,3056,3495,4625,4792,5096,5412,5621,
#Partially deleted in new
chr11	820834	825219	chr11:820834-825219	0	+	820834	820834	8553170	6	1026,66,210,604,123,697,	0,1123,1562,2692,3479,3688,
#Deleted in new
chr11	821773	822258	chr11:821773-822258	0	+	821773	821773	8553170	2	87,301,	0,184,
#Partially deleted in new
chr11	822015	823572	chr11:822015-823572	0	+	822015	822015	8553170	2	591,46,	0,1511,
#Deleted in new
chr11	823542	825218	chr11:823542-825218	0	+	823542	823542	8553170	4	45,437,123,696,	0,151,771,980,
#Partially deleted in new
chr11	823633	832883	chr11:823633-832883	3	-	823633	823633	8553170	3	230,134,172,	0,6931,9078,
#Deleted in new
chr11	823647	824437	chr11:823647-824437	0	+	823647	823647	8553170	3	208,133,124,	0,350,666,
#Deleted in new
chr11	823655	824645	chr11:823655-824645	1	-	823655	823655	8553170	2	208,256,	0,734,
#Partially deleted in new
chr11	826143	828711	chr11:826143-828711	0	+	828607	828711	789624	2	123,452,	0,2116,
#Partially deleted in new
chr11	826145	828929	chr11:826145-828929	0	+	828607	828929	789624	3	121,543,78,	0,2084,2706,
#Partially deleted in new
chr11	826156	829352	chr11:826156-829352	0	+	826156	826156	8553170	3	110,543,501,	0,2073,2695,
#Deleted in new
chr11	827247	828950	chr11:827247-828950	0	+	828607	828950	789624	3	212,513,99,	0,1012,1604,
#Deleted in new
chr11	827279	829070	chr11:827279-829070	0	+	827279	827279	8553170	4	180,30,198,219,	0,950,1295,1572,
#Deleted in new
chr11	827295	828766	chr11:827295-828766	0	+	828607	828766	789624	2	23,507,	0,964,
#Deleted in new
chr11	827577	831986	chr11:827577-831986	3	+	828607	831561	789624	9	134,513,112,181,147,88,93,72,452,	0,682,1274,1782,2408,2672,3043,3646,3957,
#Deleted in new
chr11	828259	831991	chr11:828259-831991	1	+	828607	831561	789624	8	513,112,181,147,88,93,72,457,	0,592,1100,1726,1990,2361,2964,3275,
#Deleted in new
chr11	828466	829555	chr11:828466-829555	0	+	828466	828466	8553170	3	306,332,196,	0,385,893,
#Deleted in new
chr11	828506	831986	chr11:828506-831986	1	+	828607	831709	789624	9	266,112,181,147,88,93,167,72,452,	0,345,853,1479,1743,2114,2359,2717,3028,
#Deleted in new
chr11	829296	831985	chr11:829296-831985	0	+	829296	829296	8553170	5	244,165,88,675,451,	0,671,953,1324,2238,
#Deleted in new
chr11	829304	831985	chr11:829304-831985	0	+	829304	829304	8553170	5	236,147,464,430,451,	0,681,945,1561,2230,
#Deleted in new
chr11	829306	831985	chr11:829306-831985	0	+	829306	829306	8553170	2	1989,451,	0,2228,
#Deleted in new
chr11	830484	831780	chr11:830484-831780	0	+	830484	830484	8553170	4	229,167,72,246,	0,381,739,1050,
#Partially deleted in new
chr11	832842	838835	chr11:832842-838835	3	+	836069	838192	789624	9	184,62,91,192,75,105,159,87,703,	0,1687,3220,3408,3926,4407,4617,5099,5290,
#Partially deleted in new
chr11	832886	838017	chr11:832886-838017	0	+	836069	838017	789624	9	140,80,62,91,192,75,105,159,76,	0,1101,1643,3176,3364,3882,4363,4573,5055,
#Partially deleted in new
chr11	832931	837238	chr11:832931-837238	0	+	832931	832931	8553170	6	95,62,91,192,75,10,	0,1598,3131,3319,3837,4297,
#Partially deleted in new
chr11	832951	838835	chr11:832951-838835	1	+	836069	838192	789624	9	71,62,91,192,75,105,159,87,703,	0,1578,3111,3299,3817,4298,4508,4990,5181,
#Partially deleted in new
chr11	832951	838834	chr11:832951-838834	1	+	836069	838192	789624	8	75,91,192,75,105,159,87,702,	0,3111,3299,3817,4298,4508,4990,5181,
#Partially deleted in new
chr11	832951	836480	chr11:832951-836480	0	+	832951	832951	8553170	2	75,418,	0,3111,
#Partially deleted in new
chr11	832957	836412	chr11:832957-836412	0	+	836069	836412	789624	4	65,216,91,162,	0,1572,3105,3293,
#Partially deleted in new
chr11	832960	837613	chr11:832960-837613	0	+	836069	837613	789624	5	66,91,192,105,154,	0,3102,3290,4289,4499,
#Partially deleted in new
chr11	832960	838830	chr11:832960-838830	0	+	832960	832960	8553170	8	62,62,91,593,105,159,87,698,	0,1569,3102,3290,4289,4499,4981,5172,
#Partially deleted in new
chr11	832968	837531	chr11:832968-837531	0	+	836069	837531	789624	8	54,62,120,91,192,75,105,72,	0,1561,2051,3094,3282,3800,4281,4491,
#Partially deleted in new
chr11	832985	836405	chr11:832985-836405	0	+	836069	836405	789624	4	41,274,91,155,	0,1544,3077,3265,
#Partially deleted in new
chr11	832985	836525	chr11:832985-836525	0	+	832985	832985	8553170	4	41,134,91,275,	0,1472,3077,3265,
#Partially deleted in new
chr11	832985	836539	chr11:832985-836539	0	+	832985	832985	8553170	3	41,62,477,	0,1544,3077,
#Partially deleted in new
chr11	832991	838835	chr11:832991-838835	0	+	832991	832991	8553170	8	35,62,91,593,105,159,87,703,	0,1538,3071,3259,4258,4468,4950,5141,
#Partially deleted in new
chr11	832993	837544	chr11:832993-837544	0	+	836069	837544	789624	7	33,216,91,192,75,105,85,	0,1536,3069,3257,3775,4256,4466,
#Partially deleted in new
chr11	832996	837023	chr11:832996-837023	0	+	832996	832996	8553170	3	30,91,773,	0,3066,3254,
#Partially deleted in new
chr11	833008	838831	chr11:833008-838831	0	+	836069	838192	789624	10	14,62,91,192,75,105,159,87,235,387,	0,1521,3054,3242,3760,4241,4451,4933,5124,5436,
#Partially deleted in new
chr11	834535	838798	chr11:834535-838798	1	+	836069	838192	789624	8	56,91,192,75,105,153,87,666,	0,1527,1715,2233,2714,2924,3406,3597,
#Partially deleted in new
chr11	834871	836436	chr11:834871-836436	0	+	836069	836436	789624	3	268,91,186,	0,1191,1379,
#Partially deleted in new
chr11	835193	837513	chr11:835193-837513	0	+	836069	837513	789624	6	131,91,192,75,105,54,	0,869,1057,1575,2056,2266,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	835550	836360	chr11:835550-836360	0	+	836069	836360	789624	2	603,110,	0,700,
#Deleted in new
chr11	836802	838016	chr11:836802-838016	0	+	836802	836802	8553170	3	552,159,75,	0,657,1139,
#Partially deleted in new
chr11	837355	842529	chr11:837355-842529	0	-	840371	842508	0	3	250,219,116,	0,2906,5058,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	838179	839831	chr11:838179-839831	0	+	838179	838179	8553170	2	188,176,	0,1476,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	839720	842545	chr11:839720-842545	3	-	840371	842508	0	2	760,132,	0,2693,
#Partially deleted in new
chr11	842807	867111	chr11:842807-867111	3	+	850304	866630	789624	9	108,100,80,192,75,102,132,84,550,	0,4393,7480,19742,21629,22705,22886,23110,23754,
#Partially deleted in new
chr11	842811	866817	chr11:842811-866817	1	+	850304	866630	789624	8	104,80,192,75,102,132,84,256,	0,7476,19738,21625,22701,22882,23106,23750,
#Partially deleted in new
chr11	842823	867116	chr11:842823-867116	1	+	862678	866630	789624	8	92,100,192,75,102,132,84,555,	0,4377,19726,21613,22689,22870,23094,23738,
#Partially deleted in new
chr11	842940	867116	chr11:842940-867116	1	+	850304	866630	789624	9	110,100,80,192,75,102,132,84,555,	0,4260,7347,19609,21496,22572,22753,22977,23621,
#Partially deleted in new
chr11	843314	862741	chr11:843314-862741	0	+	850304	862741	789624	4	415,131,80,192,	0,3855,6973,19235,
#Partially deleted in new
chr11	843338	865753	chr11:843338-865753	0	+	862678	865753	789624	6	331,100,192,75,102,60,	0,3862,19211,21098,22174,22355,
#Partially deleted in new
chr11	844080	867116	chr11:844080-867116	1	+	850304	866630	789624	9	106,100,80,192,75,102,132,84,555,	0,3120,6207,18469,20356,21432,21613,21837,22481,
#Partially deleted in new
chr11	844116	866857	chr11:844116-866857	1	+	850304	866630	789624	8	70,80,192,75,102,132,84,296,	0,6171,18433,20320,21396,21577,21801,22445,
#Partially deleted in new
chr11	844152	866676	chr11:844152-866676	1	+	862678	866630	789624	8	34,100,192,75,102,132,84,115,	0,3048,18397,20284,21360,21541,21765,22409,
#Partially deleted in new
chr11	844445	867116	chr11:844445-867116	1	+	850304	866630	789624	9	142,100,80,192,75,102,132,84,555,	0,2755,5842,18104,19991,21067,21248,21472,22116,
#Partially deleted in new
chr11	847196	866776	chr11:847196-866776	1	+	850304	866630	789624	7	104,80,192,75,132,84,215,	0,3091,15353,17240,18497,18721,19365,
#Partially deleted in new
chr11	847196	867109	chr11:847196-867109	0	+	847196	847196	8553170	5	104,80,1389,84,548,	0,3091,17240,18721,19365,
#Partially deleted in new
chr11	847196	864653	chr11:847196-864653	0	+	847196	847196	8553170	3	104,80,217,	0,3091,17240,
#Partially deleted in new
chr11	847196	862834	chr11:847196-862834	0	+	847196	847196	8553170	3	104,80,285,	0,3091,15353,
#Partially deleted in new
chr11	847196	865942	chr11:847196-865942	0	+	850304	865942	789624	6	104,80,75,102,132,25,	0,3091,17240,18316,18497,18721,
#Partially deleted in new
chr11	848809	867111	chr11:848809-867111	1	+	848893	866630	789624	8	124,80,192,75,102,132,84,550,	0,1478,13740,15627,16703,16884,17108,17752,
#Partially deleted in new
chr11	849815	865740	chr11:849815-865740	0	+	850304	865740	789624	5	552,192,75,102,47,	0,12734,14621,15697,15878,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	856879	859795	chr11:856879-859795	3	-	856879	856879	8553170	2	1812,249,	0,2667,
#Deleted in new
chr11	862296	867109	chr11:862296-867109	0	+	862296	862296	8553170	7	33,1803,75,102,132,84,548,	0,253,2140,3216,3397,3621,4265,
#Deleted in new
chr11	862344	865825	chr11:862344-865825	0	+	862344	862344	8553170	4	397,75,102,132,	0,2092,3168,3349,
#Deleted in new
chr11	863271	867111	chr11:863271-867111	0	+	863271	863271	8553170	4	1240,313,84,550,	0,2241,2646,3290,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	867859	915058	chr11:867859-915058	3	-	869857	904816	0	13	2097,43,81,156,102,93,62,107,45,133,150,154,314,	0,2261,2559,15288,16208,25567,31480,32144,33076,34338,35102,36846,46885,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	867859	904816	chr11:867859-904816	1	-	869857	904816	0	13	2097,43,81,156,102,93,62,107,45,133,150,75,111,	0,2261,2559,15288,16208,25567,31480,32144,33076,34338,35102,35844,36846,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	868394	883249	chr11:868394-883249	0	-	869857	883249	789624	5	277,99,43,81,102,	0,1463,1726,2024,14753,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	868394	870486	chr11:868394-870486	0	-	869857	870486	789624	5	277,132,99,43,68,	0,819,1463,1726,2024,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	868395	911461	chr11:868395-911461	1	-	869857	904816	0	13	1561,43,81,156,102,93,62,107,45,133,150,154,687,	0,1725,2023,14752,15672,25031,30944,31608,32540,33802,34566,36310,42379,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	868398	883178	chr11:868398-883178	0	-	869857	883178	789624	5	273,743,43,81,31,	0,815,1722,2020,14749,
#Partially deleted in new
chr11	869761	910835	chr11:869761-910835	1	-	869857	904816	0	12	195,43,81,156,102,62,107,45,133,150,154,61,	0,359,657,13386,14306,29578,30242,31174,32436,33200,34944,41013,
#Partially deleted in new
chr11	869766	910831	chr11:869766-910831	1	-	869857	904816	0	14	190,43,81,156,102,93,62,107,45,133,150,154,104,57,	0,354,652,13381,14301,23660,29573,30237,31169,32431,33195,34939,38775,41008,
#Deleted in new
chr11	869779	870751	chr11:869779-870751	0	-	869779	869779	8553170	3	177,43,333,	0,341,639,
#Partially deleted in new
chr11	870121	884163	chr11:870121-884163	0	-	870482	884163	789624	4	42,81,104,96,	0,297,13078,13946,
#Partially deleted in new
chr11	870418	904864	chr11:870418-904864	0	-	870418	870418	8553170	9	71,156,93,62,107,45,133,150,159,	0,12729,23008,28921,29585,30517,31779,32543,34287,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	874721	883279	chr11:874721-883279	0	-	874721	874721	8553170	2	189,132,	0,8426,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	882327	902322	chr11:882327-902322	0	-	882327	882327	8553170	8	188,156,102,93,62,107,45,125,	0,820,1740,11099,17012,17676,18608,19870,
#Deleted in new
chr11	882979	884151	chr11:882979-884151	0	-	882979	882979	8553170	2	324,84,	0,1088,
#Partially deleted in new
chr11	883145	908659	chr11:883145-908659	0	-	883145	904816	789624	7	158,102,47,105,150,154,118,	0,922,10281,19080,19816,21560,25396,
#Partially deleted in new
chr11	884067	908664	chr11:884067-908664	0	-	900935	904816	789624	9	102,93,62,107,45,183,150,154,123,	0,9359,15272,15936,16868,18080,18894,20638,24474,
#Partially deleted in new
chr11	902196	915058	chr11:902196-915058	0	-	902196	904816	789624	4	134,150,154,314,	0,765,2509,12548,
#Partially deleted in new
chr11	902234	914820	chr11:902234-914820	0	-	902234	904816	789624	5	96,150,154,104,74,	0,727,2471,6307,12512,
#Partially deleted in new
chr11	902244	910821	chr11:902244-910821	0	-	902244	904816	789624	4	86,150,154,181,	0,717,2461,8396,
#Partially deleted in new
chr11	902970	910816	chr11:902970-910816	0	-	902970	904816	789624	5	141,154,82,104,42,	0,1735,5244,5571,7804,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	904700	914801	chr11:904700-914801	0	-	904700	904816	789624	2	159,279,	0,9822,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	904736	914774	chr11:904736-914774	0	-	904736	904816	789624	2	123,471,	0,9567,
#Partially deleted in new
chr11	924893	977193	chr11:924893-977193	0	+	924893	924893	8553170	5	44,69,143,194,99,	0,34543,45275,47168,52201,
#Partially deleted in new
chr11	925808	1012245	chr11:925808-1012245	1	+	926021	1010625	789624	22	280,69,143,194,130,102,109,151,169,138,183,98,232,174,167,83,90,124,117,70,135,1698,	0,33628,44360,46253,51286,55389,58836,59623,60976,62743,66694,67475,67945,68263,74623,77913,80719,82203,83291,83519,83874,84739,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	925869	970233	chr11:925869-970233	0	+	925869	925869	8553170	4	219,197,69,65,	0,30916,33567,44299,
#Partially deleted in new
chr11	925871	985477	chr11:925871-985477	0	+	977101	985477	789624	6	129,38,130,102,109,43,	0,46346,51223,55326,58773,59563,
#Partially deleted in new
chr11	925879	1010919	chr11:925879-1010919	1	+	926021	1010707	789624	9	209,69,143,194,130,102,109,163,372,	0,33557,44289,46182,51215,55318,58765,59555,84668,
#Partially deleted in new
chr11	925880	1012239	chr11:925880-1012239	3	+	926021	1010625	789624	22	208,69,143,194,130,102,109,148,169,138,183,98,232,174,167,83,90,124,117,70,135,1692,	0,33556,44288,46181,51214,55317,58764,59554,60904,62671,66622,67403,67873,68191,74551,77841,80647,82131,83219,83447,83802,84667,
#Partially deleted in new
chr11	925899	1010919	chr11:925899-1010919	0	+	926021	1003733	789624	21	189,69,143,194,130,102,109,151,169,138,183,98,232,174,83,90,124,117,70,135,372,	0,33537,44269,46162,51195,55298,58745,59532,60885,62652,66603,67384,67854,68172,77822,80628,82112,83200,83428,83783,84648,
#Partially deleted in new
chr11	925944	1000483	chr11:925944-1000483	0	+	925944	925944	8553170	5	144,69,123,174,52,	0,33492,67918,68127,74487,
#Partially deleted in new
chr11	932692	977157	chr11:932692-977157	0	+	932692	977157	789624	5	85,69,143,194,63,	0,26744,37476,39369,44402,
#Partially deleted in new
chr11	933560	977207	chr11:933560-977207	0	+	933560	977207	789624	5	37,69,143,194,113,	0,25876,36608,38501,43534,
#Partially deleted in new
chr11	940734	972216	chr11:940734-972216	0	+	940845	972216	789624	4	160,69,143,155,	0,18702,29434,31327,
#Partially deleted in new
chr11	942278	972197	chr11:942278-972197	0	+	970260	972197	789624	4	116,69,143,136,	0,17158,27890,29783,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	943099	972191	chr11:943099-972191	0	+	970260	972191	789624	4	215,69,143,130,	0,16337,27069,28962,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	946460	977120	chr11:946460-977120	0	+	970260	977120	789624	5	503,69,143,194,26,	0,12976,23708,25601,30634,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	948420	948524	chr11:948420-948524	3	+	948420	948420	8553170	1	104,	0,
#Deleted in new
chr11	985383	986846	chr11:985383-986846	0	+	985383	985383	8553170	2	199,62,	0,1401,
#Partially deleted in new
chr11	985537	988827	chr11:985537-988827	0	+	985537	985537	8553170	3	45,169,276,	0,1247,3014,
#Partially deleted in new
chr11	996063	1009216	chr11:996063-1009216	0	+	996063	996063	8553170	6	162,167,83,90,124,117,	0,4368,7658,10464,11948,13036,
#Partially deleted in new
chr11	1001325	1009366	chr11:1001325-1009366	0	+	1001325	1001325	8553170	6	119,83,90,124,117,39,	0,2396,5202,6686,7774,8002,
#Partially deleted in new
chr11	1003666	1009774	chr11:1003666-1009774	0	+	1003666	1003666	8553170	6	138,90,124,117,70,92,	0,2861,4345,5433,5661,6016,
#Partially deleted in new
chr11	1003731	1007040	chr11:1003731-1007040	0	+	1003731	1003731	8553170	2	73,513,	0,2796,
#Deleted in new
chr11	1006543	1008282	chr11:1006543-1008282	0	+	1006543	1006543	8553170	2	74,271,	0,1468,
#Deleted in new
chr11	1006708	1010926	chr11:1006708-1010926	0	+	1006708	1006708	8553170	3	2508,70,1244,	0,2619,2974,
#Deleted in new
chr11	1009354	1010237	chr11:1009354-1010237	0	+	1009354	1009354	8553170	2	43,555,	0,328,
#Partially deleted in new
chr11	1012820	1036706	chr11:1012820-1036706	3	-	1013455	1036655	789624	33	813,103,3009,222,168,51,63,144,157,240,186,111,142,152,110,53,250,133,95,162,138,73,105,139,121,123,208,110,91,127,241,63,103,	0,1078,2941,6454,7269,7863,8394,10688,11126,12023,12361,12984,13179,13506,14120,14320,14447,14864,15144,15405,15825,16068,16225,16407,16674,17392,17752,18126,18348,18786,18992,20192,23783,
#Deleted in new
chr11	1013472	1016153	chr11:1013472-1016153	0	-	1013472	1016153	789624	3	161,103,392,	0,323,2289,
#Deleted in new
chr11	1019904	1020734	chr11:1019904-1020734	0	-	1019961	1020734	789624	2	353,51,	0,779,
#Deleted in new
chr11	1031618	1033209	chr11:1031618-1033209	0	-	1031618	1033199	789624	3	115,241,197,	0,194,1394,
#Deleted in new
chr11	1049879	1055749	chr11:1049879-1055749	3	+	1049879	1049879	8553170	4	83,221,154,636,	0,1743,4359,5234,
#Deleted in new
chr11	1052610	1055749	chr11:1052610-1055749	1	+	1052610	1052610	8553170	1	3139,	0,
#Deleted in new
chr11	1074874	1110511	chr11:1074874-1110511	0	+	1074874	1074874	8553170	49	103,271,115,91,110,211,126,118,139,111,70,138,165,95,127,256,53,101,152,139,111,180,240,157,132,148,44,204,18,5884,198,224,175,248,184,229,179,70,101,32,178,105,41,123,99,129,40,127,376,	0,776,2579,3077,3248,3437,6787,7410,7606,8003,8202,8550,8778,9416,9717,10193,10679,10870,11371,11860,12880,13072,13383,14634,15067,15889,17524,17969,18659,19267,25882,26348,26881,27542,28399,28906,29858,30428,30636,30981,32211,32775,33129,33298,33673,34406,34772,35026,35261,
#Deleted in new
chr11	1094473	1099340	chr11:1094473-1099340	4	+	1094473	1094473	16724991	6	3795,24,36,9,15,966,	0,3799,3828,3868,3882,3901,
#Deleted in new
chr11	1102454	1103456	chr11:1102454-1103456	3	+	1102454	1103456	789624	2	210,183,	0,819,
#Partially deleted in new
chr11	1157952	1201138	chr11:1157952-1201138	3	+	1157999	1200702	0	49	120,78,60,262,115,91,110,214,126,118,139,111,70,138,165,95,127,256,53,101,152,139,114,180,240,157,129,163,44,189,10371,200,175,251,184,268,179,88,104,32,172,102,38,123,99,120,70,115,701,	0,2659,3574,3954,4579,5002,5929,6153,6454,7349,7669,9924,10530,10689,10909,14476,16543,16929,17265,18198,18561,18975,19278,19501,20491,21139,22069,22401,23186,23318,24202,34830,35532,36157,36534,37059,37923,38435,38664,38924,39515,39950,40315,40921,41134,41418,41742,41902,42485,
#Partially deleted in new
chr11	1223065	1239541	chr11:1223065-1239541	0	+	1223065	1223065	8553170	26	128,57,72,262,115,91,107,202,126,118,139,111,70,138,165,95,127,256,56,101,152,139,111,177,240,671,	0,2615,3139,3549,3965,4242,4609,5498,6104,6624,6939,7424,7870,8357,8930,9384,9578,9947,10727,11139,11463,12019,12237,13320,13859,15805,
#Partially deleted in new
chr11	1223065	1262172	chr11:1223065-1262172	3	+	1223123	1261608	789624	49	128,57,72,262,115,91,107,202,126,118,139,111,70,138,165,95,127,256,56,101,152,139,111,177,240,157,129,145,44,198,10893,182,172,260,187,226,176,70,101,32,181,105,38,120,87,123,43,103,784,	0,2615,3139,3549,3965,4242,4609,5498,6104,6624,6939,7424,7870,8357,8930,9384,9578,9947,10727,11139,11463,12019,12237,13320,13859,15805,16372,16733,16979,17112,17785,29277,29743,31026,31628,31975,32317,33090,33605,34174,34464,35033,35264,35876,36690,36897,37285,37560,38323,
#Deleted in new
chr11	1228519	1229763	chr11:1228519-1229763	0	+	1228519	1228519	8553170	3	246,126,74,	0,650,1170,
#Deleted in new
chr11	1242260	1249676	chr11:1242260-1249676	3	-	1242260	1242260	789624	2	378,56,	0,7360,
#Deleted in new
chr11	1256604	1256670	chr11:1256604-1256670	3	+	1256604	1256604	5263520	1	66,	0,
#Deleted in new
chr11	1257625	1262043	chr11:1257625-1262043	0	+	1257625	1262043	789624	6	85,105,38,120,87,26,	0,473,704,1316,2130,4392,
#Deleted in new
chr11	1259522	1260085	chr11:1259522-1260085	0	+	1259522	1259522	8553170	2	320,123,	0,440,
#Partially deleted in new
chr11	1274370	1309622	chr11:1274370-1309622	3	-	1277038	1309498	0	6	2883,91,153,183,150,157,	0,11631,14253,15856,21274,35095,
#Partially deleted in new
chr11	1274371	1302790	chr11:1274371-1302790	1	-	1277038	1290385	0	6	2882,91,153,183,150,207,	0,11630,14252,15855,21273,28212,
#Partially deleted in new
chr11	1274372	1309619	chr11:1274372-1309619	1	-	1277038	1309498	789624	5	2881,91,153,150,154,	0,11629,14251,21272,35093,
#Partially deleted in new
chr11	1275652	1309654	chr11:1275652-1309654	1	-	1277038	1309498	789624	6	1601,91,153,183,87,168,	0,10349,12971,14574,19992,33834,
#Partially deleted in new
chr11	1276816	1309583	chr11:1276816-1309583	0	-	1283517	1309498	789624	6	437,315,91,153,183,118,	0,6466,9185,11807,13410,32649,
#Partially deleted in new
chr11	1277012	1309623	chr11:1277012-1309623	1	-	1277193	1309498	789624	3	241,150,158,	0,18632,32453,
#Partially deleted in new
chr11	1277154	1309623	chr11:1277154-1309623	0	-	1277154	1309498	789624	5	99,91,153,183,158,	0,8847,11469,13072,32311,
#Deleted in new
chr11	1288635	1292170	chr11:1288635-1292170	0	-	1288635	1288635	8553170	3	141,183,345,	0,1591,3190,
#Partially deleted in new
chr11	1290094	1309590	chr11:1290094-1309590	0	-	1290094	1290094	8553170	3	315,150,125,	0,5550,19371,
#Partially deleted in new
chr11	1290914	1309597	chr11:1290914-1309597	0	-	1290914	1290914	8553170	3	279,150,132,	0,4730,18551,
#Partially deleted in new
chr11	1295376	1309623	chr11:1295376-1309623	0	-	1295376	1295376	8553170	2	418,158,	0,14089,
#Partially deleted in new
chr11	1295738	1306194	chr11:1295738-1306194	0	-	1295738	1295738	8553170	2	56,372,	0,10084,
#Partially deleted in new
chr11	1298148	1309644	chr11:1298148-1309644	0	-	1298148	1298148	8553170	2	416,179,	0,11317,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	1309768	1310707	chr11:1309768-1310707	3	+	1309768	1309768	789624	1	939,	0,
#Partially deleted in new
chr11	1350358	1364286	chr11:1350358-1364286	3	+	1350358	1350358	8553170	5	404,94,170,64,726,	0,10356,12319,12595,13202,
#Partially deleted in new
chr11	1389898	1462685	chr11:1389898-1462685	3	+	1390284	1460989	789624	20	477,95,86,141,117,34,69,147,32,165,98,151,61,208,49,124,181,90,48,1716,	0,46141,48407,50889,52591,53207,53436,53590,55072,55395,55672,55858,59877,60688,61472,64586,66449,66699,69293,71071,
#Partially deleted in new
chr11	1389900	1461714	chr11:1389900-1461714	1	+	1390284	1460723	789624	20	475,95,86,141,117,34,69,147,32,165,98,151,61,208,49,124,181,90,48,1215,	0,46139,48405,50887,52589,53205,53434,53588,55070,55393,55670,55856,59875,60686,61470,64584,66447,66697,69291,70599,
#Partially deleted in new
chr11	1389900	1461714	chr11:1389900-1461714	0	+	1390284	1457040	789624	21	475,95,86,141,117,34,69,147,32,165,98,151,61,208,49,124,181,90,95,48,745,	0,46139,48405,50887,52589,53205,53434,53588,55070,55393,55670,55856,59875,60686,61470,64584,66447,66697,67054,69291,71069,
#Partially deleted in new
chr11	1389900	1461714	chr11:1389900-1461714	1	+	1390284	1457040	789624	20	475,95,86,141,117,34,69,147,32,165,98,151,61,208,49,124,181,90,95,745,	0,46139,48405,50887,52589,53205,53434,53588,55070,55393,55670,55856,59875,60686,61470,64584,66447,66697,67054,71069,
#Partially deleted in new
chr11	1390284	1457040	chr11:1390284-1457040	1	+	1390284	1457040	789624	20	91,95,86,141,117,34,69,147,32,165,98,151,66,61,208,49,124,181,90,86,	0,45755,48021,50503,52205,52821,53050,53204,54686,55009,55286,55472,57513,59491,60302,61086,64200,66063,66313,66670,
#Partially deleted in new
chr11	1409399	1442516	chr11:1409399-1442516	0	+	1436128	1442516	789624	5	232,95,86,141,27,	0,26640,28906,31388,33090,
#Partially deleted in new
chr11	1409758	1443340	chr11:1409758-1443340	0	+	1436128	1443340	789624	7	101,95,86,141,117,34,6,	0,26281,28547,31029,32731,33347,33576,
#Partially deleted in new
chr11	1410442	1462090	chr11:1410442-1462090	1	+	1436128	1457040	789624	20	464,95,86,141,117,34,69,147,32,165,98,151,61,208,49,124,181,90,95,1121,	0,25597,27863,30345,32047,32663,32892,33046,34528,34851,35128,35314,39333,40144,40928,44042,45905,46155,46512,50527,
#Partially deleted in new
chr11	1411151	1461745	chr11:1411151-1461745	1	+	1411404	1460723	789624	20	482,95,86,141,117,34,69,147,32,165,98,151,61,208,49,124,181,90,48,1198,	0,24888,27154,29636,31338,31954,32183,32337,33819,34142,34419,34605,38624,39435,40219,43333,45196,45446,48040,49396,
#Deleted in new
chr11	1440798	1461136	chr11:1440798-1461136	0	+	1440798	1445308	789624	17	130,117,34,69,147,165,98,151,61,208,49,124,181,90,95,48,167,	0,1691,2307,2536,2690,4495,4772,4958,8977,9788,10572,13686,15549,15799,16156,18393,20171,
#Deleted in new
chr11	1442444	1445593	chr11:1442444-1445593	0	+	1442444	1442444	8553170	6	162,34,69,147,165,23,	0,661,890,1044,2849,3126,
#Deleted in new
chr11	1450657	1462087	chr11:1450657-1462087	1	+	1451387	1457040	789624	8	137,49,124,181,90,95,48,1118,	0,713,3827,5690,5940,6297,8534,10312,
#Deleted in new
chr11	1450684	1462689	chr11:1450684-1462689	0	+	1450684	1460971	789624	7	110,49,124,181,90,45,1720,	0,686,3800,5663,5913,8507,10285,
#Deleted in new
chr11	1453837	1461740	chr11:1453837-1461740	0	+	1453837	1453837	8553170	6	771,181,90,95,48,771,	0,2510,2760,3117,5354,7132,
#Deleted in new
chr11	1454426	1459447	chr11:1454426-1459447	0	+	1454426	1454426	8553170	4	182,181,90,256,	0,1921,2171,4765,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	1464581	1467632	chr11:1464581-1467632	3	-	1464581	1464581	8553170	2	92,2340,	0,711,
#Deleted in new
chr11	1469456	1473436	chr11:1469456-1473436	0	-	1469456	1469456	8553170	2	1032,2142,	0,1838,
#Partially deleted in new
chr11	1469961	1486746	chr11:1469961-1486746	3	-	1470171	1486556	789624	5	527,125,94,161,300,	0,1333,10431,10763,16485,
#Partially deleted in new
chr11	1470171	1480895	chr11:1470171-1480895	1	-	1470171	1480895	789624	5	317,125,94,163,6,	0,1123,10221,10553,10718,
#Partially deleted in new
chr11	1470244	1501247	chr11:1470244-1501247	0	-	1470244	1470244	8553170	5	244,125,94,161,171,	0,1050,10148,10480,30832,
#Partially deleted in new
chr11	1471304	1480885	chr11:1471304-1480885	0	-	1471304	1471304	8553170	2	115,493,	0,9088,
#Partially deleted in new
chr11	1480578	1501247	chr11:1480578-1501247	0	-	1480578	1480578	8553170	2	307,171,	0,20498,
#Deleted in new
chr11	1480664	1481585	chr11:1480664-1481585	0	-	1480664	1480664	8553170	2	221,366,	0,555,
#Deleted in new
chr11	1554043	1571920	chr11:1554043-1571920	3	-	1556517	1565826	0	7	3531,124,160,167,139,339,20,	0,3750,4068,4845,9807,11552,17857,
#Deleted in new
chr11	1554050	1565936	chr11:1554050-1565936	1	-	1556517	1565826	0	6	3524,124,160,167,139,341,	0,3743,4061,4838,9800,11545,
#Deleted in new
chr11	1557522	1559443	chr11:1557522-1559443	0	-	1557522	1557522	8553170	5	52,124,160,167,134,	0,271,589,1366,1787,
#Partially deleted in new
chr11	1571352	1597583	chr11:1571352-1597583	0	+	1571352	1571352	8553170	2	234,336,	0,25895,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	1572740	1599184	chr11:1572740-1599184	3	+	1572740	1572740	789624	2	328,1937,	0,24507,
#Partially deleted in new
chr11	1573256	1597549	chr11:1573256-1597549	0	+	1573256	1573256	8553170	2	217,302,	0,23991,
#Partially deleted in new
chr11	1573648	1597441	chr11:1573648-1597441	0	+	1573648	1573648	8553170	2	215,194,	0,23599,
#Deleted in new
chr11	1584341	1585283	chr11:1584341-1585283	3	-	1584412	1585249	789624	1	942,	0,
#Deleted in new
chr11	1597176	1598294	chr11:1597176-1598294	3	-	1597716	1598250	789624	1	1118,	0,
#Deleted in new
chr11	1607564	1608463	chr11:1607564-1608463	3	-	1607668	1608385	789624	1	899,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	1620957	1622138	chr11:1620957-1622138	3	-	1621406	1622093	789624	1	1181,	0,
#Deleted in new
chr11	1621406	1622093	chr11:1621406-1622093	1	-	1621406	1622093	789624	2	170,490,	0,197,
#Deleted in new
chr11	1629774	1630707	chr11:1629774-1630707	3	+	1629840	1630554	789624	1	933,	0,
#Deleted in new
chr11	1662583	1663343	chr11:1662583-1663343	3	-	1662583	1662583	8553170	2	555,33,	0,727,
#Deleted in new
chr11	1665596	1667856	chr11:1665596-1667856	3	+	1665596	1665596	5263520	3	168,109,1155,	0,838,1105,
#Deleted in new
chr11	1665866	1667855	chr11:1665866-1667855	1	+	1665866	1665866	8553170	1	1989,	0,
#Deleted in new
chr11	1683268	1685629	chr11:1683268-1685629	3	-	1683268	1683268	5263520	3	766,109,192,	0,925,2169,
#Deleted in new
chr11	1688296	1689056	chr11:1688296-1689056	3	+	1688296	1688296	8553170	2	33,554,	0,206,
#Deleted in new
chr11	1697194	1697755	chr11:1697194-1697755	3	+	1697245	1697635	789624	1	561,	0,
#Partially deleted in new
chr11	1732409	1750591	chr11:1732409-1750591	3	-	1735279	1750442	789624	3	3020,453,233,	0,15257,17949,
#Partially deleted in new
chr11	1732409	1750580	chr11:1732409-1750580	0	-	1747928	1750442	789624	4	3020,453,112,222,	0,15257,16605,17949,
#Partially deleted in new
chr11	1734820	1763954	chr11:1734820-1763954	1	-	1735279	1763859	789624	10	609,453,99,145,123,233,119,124,160,163,	0,12846,18982,19173,20085,22503,24148,24695,26488,28971,
#Partially deleted in new
chr11	1735151	1753874	chr11:1735151-1753874	0	-	1735279	1753874	789624	2	278,72,	0,18651,
#Partially deleted in new
chr11	1735212	1749102	chr11:1735212-1749102	0	-	1735212	1735212	8553170	2	217,1346,	0,12544,
#Deleted in new
chr11	1744358	1763932	chr11:1744358-1763932	3	-	1746574	1763859	789624	10	2441,453,99,145,123,233,119,124,160,141,	0,3308,9444,9635,10547,12965,14610,15157,16950,19433,
#Deleted in new
chr11	1747746	1757452	chr11:1747746-1757452	0	-	1747746	1757452	789624	6	373,138,99,145,123,129,	0,5786,6056,6247,7159,9577,
#Deleted in new
chr11	1747929	1749197	chr11:1747929-1749197	0	-	1747929	1747929	8553170	2	190,179,	0,1089,
#Deleted in new
chr11	1752751	1763992	chr11:1752751-1763992	3	-	1753502	1763859	0	9	919,99,145,123,233,119,124,160,201,	0,1051,1242,2154,4572,6217,6764,8557,11040,
#Deleted in new
chr11	1752767	1763906	chr11:1752767-1763906	1	-	1753502	1763859	789624	9	903,99,145,105,233,119,124,160,115,	0,1035,1226,2156,4556,6201,6748,8541,11024,
#Deleted in new
chr11	1752774	1763901	chr11:1752774-1763901	0	-	1754901	1763859	789624	9	896,99,138,127,233,119,124,160,110,	0,1028,1219,2127,4549,6194,6741,8534,11017,
#Deleted in new
chr11	1752787	1763896	chr11:1752787-1763896	1	-	1753502	1763859	789624	9	874,99,145,123,233,119,124,160,105,	0,1015,1206,2118,4536,6181,6728,8521,11004,
#Deleted in new
chr11	1752787	1755247	chr11:1752787-1755247	0	-	1752787	1752787	8553170	5	883,99,145,123,12,	0,1015,1206,2118,2448,
#Deleted in new
chr11	1752998	1763927	chr11:1752998-1763927	1	-	1753502	1763859	789624	9	672,99,145,123,233,119,124,139,136,	0,804,995,1907,4325,5970,6517,8331,10793,
#Deleted in new
chr11	1753139	1758033	chr11:1753139-1758033	0	-	1753139	1753139	8553170	6	531,99,145,123,233,69,	0,663,854,1766,4184,4825,
#Deleted in new
chr11	1753205	1763941	chr11:1753205-1763941	1	-	1753502	1763859	789624	9	465,78,145,123,233,119,124,160,150,	0,597,788,1700,4118,5763,6310,8103,10586,
#Deleted in new
chr11	1753312	1763948	chr11:1753312-1763948	1	-	1753502	1763859	789624	9	358,99,145,123,233,119,118,160,157,	0,490,681,1593,4011,5656,6203,7996,10479,
#Deleted in new
chr11	1753382	1754946	chr11:1753382-1754946	0	-	1753502	1754946	789624	4	288,99,262,41,	0,420,611,1523,
#Deleted in new
chr11	1753798	1755348	chr11:1753798-1755348	0	-	1753798	1753798	8553170	2	340,443,	0,1107,
#Deleted in new
chr11	1754023	1761540	chr11:1754023-1761540	0	-	1754023	1761491	789624	6	115,123,233,119,124,232,	0,882,3300,4945,5492,7285,
#Deleted in new
chr11	1757323	1762403	chr11:1757323-1762403	0	-	1757323	1761431	789624	5	233,119,124,160,271,	0,1645,2192,3985,4809,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	1759051	1764573	chr11:1759051-1764573	0	-	1759051	1761431	789624	4	36,124,160,54,	0,464,2257,5468,
#Deleted in new
chr11	1760347	1762486	chr11:1760347-1762486	3	+	1760347	1760347	8553170	2	847,1168,	0,971,
#Deleted in new
chr11	1763008	1763749	chr11:1763008-1763749	3	-	1763008	1763008	8553170	2	44,208,	0,533,
#Deleted in new
chr11	1776929	1778388	chr11:1776929-1778388	3	-	1776929	1776929	8553170	2	245,93,	0,1366,
#Deleted in new
chr11	1792552	1792870	chr11:1792552-1792870	7	+	1792552	1792552	16724991	1	318,	0,
#Deleted in new
chr11	1802888	1804095	chr11:1802888-1804095	7	-	1802888	1802888	16724991	1	1207,	0,
#Partially deleted in new
chr11	1828306	1835934	chr11:1828306-1835934	0	+	1835105	1835934	789624	5	87,172,103,164,49,	0,235,6790,6989,7579,
#Partially deleted in new
chr11	1828542	1835926	chr11:1828542-1835926	0	+	1835105	1835926	789624	4	171,106,164,41,	0,6551,6753,7343,
#Partially deleted in new
chr11	1831086	1837521	chr11:1831086-1837521	0	+	1831086	1831086	8553170	6	810,106,164,976,134,330,	0,4007,4209,4799,5870,6105,
#Deleted in new
chr11	1833791	1837521	chr11:1833791-1837521	0	+	1833791	1833791	8553170	3	3070,134,330,	0,3165,3400,
#Deleted in new
chr11	1834309	1837521	chr11:1834309-1837521	0	+	1834309	1834309	8553170	6	308,106,164,707,106,565,	0,784,986,1576,2446,2647,
#Deleted in new
chr11	1834443	1837521	chr11:1834443-1837521	3	+	1834571	1837431	789624	9	158,106,164,99,159,168,106,134,330,	0,650,852,1442,1682,1981,2312,2513,2748,
#Deleted in new
chr11	1834475	1837521	chr11:1834475-1837521	0	+	1834475	1834475	8553170	7	126,106,164,707,106,134,330,	0,618,820,1410,2280,2481,2716,
#Deleted in new
chr11	1834571	1836104	chr11:1834571-1836104	0	+	1834571	1834571	8553170	4	30,106,164,219,	0,522,724,1314,
#Deleted in new
chr11	1834589	1837521	chr11:1834589-1837521	0	+	1834589	1837431	789624	9	28,103,164,99,159,168,106,134,330,	0,507,706,1296,1536,1835,2166,2367,2602,
#Deleted in new
chr11	1834803	1837521	chr11:1834803-1837521	1	+	1835105	1837431	789624	8	396,164,99,159,168,106,134,330,	0,492,1082,1322,1621,1952,2153,2388,
#Deleted in new
chr11	1834870	1837521	chr11:1834870-1837521	0	+	1835105	1836141	789624	8	329,181,99,159,168,106,134,330,	0,408,1015,1255,1554,1885,2086,2321,
#Deleted in new
chr11	1835105	1835582	chr11:1835105-1835582	0	+	1835105	1835105	8553170	2	94,287,	0,190,
#Deleted in new
chr11	1835559	1836418	chr11:1835559-1836418	0	+	1835559	1835559	8553170	2	57,533,	0,326,
#Deleted in new
chr11	1836028	1836552	chr11:1836028-1836552	0	+	1836028	1836028	8553170	2	256,128,	0,396,
#Deleted in new
chr11	1838988	1841678	chr11:1838988-1841678	3	+	1839696	1841551	0	8	45,30,7,42,129,90,177,223,	0,686,860,1414,1539,1830,2042,2467,
#Deleted in new
chr11	1839480	1841678	chr11:1839480-1841678	1	+	1839696	1841551	0	8	47,30,7,42,129,90,177,223,	0,194,368,922,1047,1338,1550,1975,
#Deleted in new
chr11	1839672	1841677	chr11:1839672-1841677	1	+	1839696	1841551	789624	6	32,49,129,90,177,222,	0,723,855,1146,1358,1783,
#Deleted in new
chr11	1839696	1841680	chr11:1839696-1841680	1	+	1839696	1841551	0	7	8,7,42,129,90,177,225,	0,152,706,831,1122,1334,1759,
#Deleted in new
chr11	1840193	1841678	chr11:1840193-1841678	1	+	1840223	1841551	0	6	45,42,129,90,177,223,	0,209,334,625,837,1262,
#Deleted in new
chr11	1840217	1840735	chr11:1840217-1840735	0	+	1840217	1840217	8553170	2	227,208,	0,310,
#Partially deleted in new
chr11	1852969	1892263	chr11:1852969-1892263	3	+	1853144	1887563	0	11	228,138,165,142,93,44,82,135,78,103,491,	0,27117,28462,30449,30962,31310,31530,33762,34267,34504,38803,
#Deleted in new
chr11	1859463	1859536	chr11:1859463-1859536	3	-	1859463	1859463	5263520	1	73,	0,
#Partially deleted in new
chr11	1863245	1883428	chr11:1863245-1883428	0	+	1880219	1883428	789624	4	369,138,165,10,	0,16841,18186,20173,
#Partially deleted in new
chr11	1864171	1883997	chr11:1864171-1883997	0	+	1880219	1883997	789624	5	63,138,165,142,66,	0,15915,17260,19247,19760,
#Deleted in new
chr11	1864176	1866667	chr11:1864176-1866667	3	+	1864176	1864176	8553170	2	166,164,	0,2327,
#Partially deleted in new
chr11	1865164	1892263	chr11:1865164-1892263	1	+	1866474	1887563	0	12	98,447,138,165,142,93,44,82,135,78,103,491,	0,1300,14922,16267,18254,18767,19115,19335,21567,22072,22309,26608,
#Partially deleted in new
chr11	1868672	1892263	chr11:1868672-1892263	1	+	1880219	1887563	0	11	314,138,165,142,93,44,82,135,78,103,491,	0,11414,12759,14746,15259,15607,15827,18059,18564,18801,23100,
#Partially deleted in new
chr11	1869143	1883442	chr11:1869143-1883442	0	+	1880219	1883442	789624	4	90,138,165,24,	0,10943,12288,14275,
#Partially deleted in new
chr11	1869641	1886866	chr11:1869641-1886866	0	+	1869703	1886866	789624	8	88,138,165,142,93,44,82,135,	0,10445,11790,13777,14290,14638,14858,17090,
#Partially deleted in new
chr11	1870149	1884009	chr11:1870149-1884009	0	+	1870206	1884009	789624	5	59,138,165,142,78,	0,9937,11282,13269,13782,
#Partially deleted in new
chr11	1870243	1892263	chr11:1870243-1892263	1	+	1880219	1887563	0	11	1169,138,165,142,93,44,82,135,78,103,491,	0,9843,11188,13175,13688,14036,14256,16488,16993,17230,21529,
#Partially deleted in new
chr11	1870243	1881552	chr11:1870243-1881552	0	+	1870458	1881552	789624	3	322,138,121,	0,9843,11188,
#Partially deleted in new
chr11	1870251	1892263	chr11:1870251-1892263	1	+	1880219	1887563	0	11	410,138,165,142,93,44,82,135,78,103,491,	0,9835,11180,13167,13680,14028,14248,16480,16985,17222,21521,
#Partially deleted in new
chr11	1870885	1886866	chr11:1870885-1886866	0	+	1880219	1886866	789624	8	88,138,165,142,93,44,82,135,	0,9201,10546,12533,13046,13394,13614,15846,
#Partially deleted in new
chr11	1871351	1887576	chr11:1871351-1887576	0	+	1871351	1871351	8553170	9	61,165,142,93,44,82,135,78,103,	0,10080,12067,12580,12928,13148,15380,15885,16122,
#Partially deleted in new
chr11	1876476	1886866	chr11:1876476-1886866	0	+	1880219	1886866	789624	8	169,138,165,142,93,44,82,135,	0,3610,4955,6942,7455,7803,8023,10255,
#Deleted in new
chr11	1880044	1880147	chr11:1880044-1880147	3	+	1880044	1880044	5263520	1	103,	0,
#Partially deleted in new
chr11	1880676	1892267	chr11:1880676-1892267	0	+	1880676	1880676	8553170	10	687,165,142,93,44,82,135,78,103,495,	0,755,2742,3255,3603,3823,6055,6560,6797,11096,
#Deleted in new
chr11	1884387	1887502	chr11:1884387-1887502	0	+	1884387	1884387	8553170	4	194,135,78,29,	0,2344,2849,3086,
#Deleted in new
chr11	1886731	1887345	chr11:1886731-1887345	0	+	1886731	1886731	8553170	2	135,109,	0,505,
#Deleted in new
chr11	1888576	1891895	chr11:1888576-1891895	3	-	1889144	1890584	789624	1	3319,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	1897014	1908656	chr11:1897014-1908656	3	+	1897014	1897014	8553170	5	131,55,135,153,825,	0,4701,5575,6089,10817,
#Deleted in new
chr11	1919561	1938706	chr11:1919561-1938706	3	+	1922874	1938492	789624	16	201,35,14,18,18,15,24,19,46,117,78,114,110,91,41,269,	0,3295,3486,3993,5537,7133,9558,10248,12907,14159,14369,14770,14984,15267,17401,18876,
#Deleted in new
chr11	1919705	1938701	chr11:1919705-1938701	1	+	1922874	1938492	789624	14	57,35,14,18,15,19,46,117,78,114,110,91,41,264,	0,3151,3342,5393,6989,10104,12763,14015,14225,14626,14840,15123,17257,18732,
#Deleted in new
chr11	1919705	1938706	chr11:1919705-1938706	1	+	1922874	1938492	789624	15	57,35,14,18,18,15,19,46,117,78,114,110,91,41,269,	0,3151,3342,3849,5393,6989,10104,12763,14015,14225,14626,14840,15123,16508,18732,
#Deleted in new
chr11	1919705	1938706	chr11:1919705-1938706	1	+	1922874	1938492	789624	16	57,35,14,18,18,21,12,19,46,117,78,114,110,91,41,269,	0,3151,3342,3849,5393,5550,6764,10104,12763,14015,14225,14626,14840,15123,17257,18732,
#Deleted in new
chr11	1919705	1934919	chr11:1919705-1934919	0	+	1922874	1934919	789624	11	57,35,14,18,19,46,117,78,114,110,91,	0,3151,3342,3849,10104,12763,14015,14225,14626,14840,15123,
#Deleted in new
chr11	1919722	1938492	chr11:1919722-1938492	1	+	1922874	1938492	789624	17	40,35,14,18,18,21,12,15,19,46,117,78,114,110,91,41,55,	0,3134,3325,3832,5376,5533,6747,6972,10087,12746,13998,14208,14609,14823,15106,17240,18715,
#Deleted in new
chr11	1919724	1938492	chr11:1919724-1938492	1	+	1922874	1938492	789624	14	38,35,14,18,18,19,46,117,78,114,110,91,41,55,	0,3132,3323,3830,5374,10085,12744,13996,14206,14607,14821,15104,17238,18713,
#Deleted in new
chr11	1919747	1938706	chr11:1919747-1938706	1	+	1922874	1938492	789624	16	15,258,35,14,18,18,15,19,46,117,78,114,110,91,41,269,	0,1614,3109,3300,3807,5351,6947,10062,12721,13973,14183,14584,14798,15081,17215,18690,
#Deleted in new
chr11	1922778	1938566	chr11:1922778-1938566	1	+	1922874	1938492	789624	15	113,14,18,18,21,12,19,46,117,78,114,110,91,41,129,	0,269,776,2320,2477,3691,7031,9690,10942,11152,11553,11767,12050,14184,15659,
#Deleted in new
chr11	1922778	1938567	chr11:1922778-1938567	1	+	1933753	1938492	789624	11	113,18,19,46,117,78,114,110,91,41,130,	0,2320,7031,9690,10942,11152,11553,11767,12050,14184,15659,
#Deleted in new
chr11	1922778	1938567	chr11:1922778-1938567	1	+	1922874	1938492	789624	14	113,14,18,18,15,19,46,117,78,114,110,91,41,130,	0,269,776,2320,3916,7031,9690,10942,11152,11553,11767,12050,14184,15659,
#Deleted in new
chr11	1922866	1938492	chr11:1922866-1938492	1	+	1922874	1938492	789624	17	25,14,18,18,21,12,15,24,19,46,117,78,114,110,91,41,55,	0,181,688,2232,2389,3603,3828,6253,6943,9602,10854,11064,11465,11679,11962,14096,15571,
#Deleted in new
chr11	1922874	1938492	chr11:1922874-1938492	1	+	1922874	1938492	789624	12	17,14,18,19,46,117,78,114,110,91,41,55,	0,173,2224,6935,9594,10846,11056,11457,11671,11954,14088,15563,
#Deleted in new
chr11	1922874	1938492	chr11:1922874-1938492	1	+	1922874	1938492	789624	12	17,14,18,19,46,117,78,114,110,91,41,55,	0,173,2224,6935,9594,10846,11056,11457,11671,11954,13339,15563,
#Deleted in new
chr11	1924917	1934655	chr11:1924917-1934655	0	+	1924917	1924917	8553170	11	199,21,12,15,76,19,46,117,78,114,110,	0,338,1552,1777,4150,4892,7551,8803,9013,9414,9628,
#Deleted in new
chr11	1927821	1938483	chr11:1927821-1938483	0	+	1927821	1927821	8553170	10	216,19,46,117,78,114,110,91,41,46,	0,1988,4647,5899,6109,6510,6724,7007,9141,10616,
#Deleted in new
chr11	1933872	1935581	chr11:1933872-1935581	0	+	1933872	1933872	8553170	4	136,114,110,753,	0,459,673,956,
#Deleted in new
chr11	1938199	1938702	chr11:1938199-1938702	0	+	1938199	1938199	8553170	2	69,265,	0,238,
#Deleted in new
chr11	1947277	1956609	chr11:1947277-1956609	1	+	1947362	1956420	0	6	102,123,83,74,193,68,	0,3621,4849,5504,8978,9264,
#Deleted in new
chr11	1947277	1956609	chr11:1947277-1956609	3	+	1947362	1956420	0	5	102,123,83,74,354,	0,3621,4849,5504,8978,
#Partially deleted in new
chr11	1947331	1984522	chr11:1947331-1984522	1	+	1947362	1984516	789624	6	48,123,83,74,200,85,	0,3567,4795,5450,25227,37106,
#Deleted in new
chr11	1947340	1962838	chr11:1947340-1962838	1	+	1947362	1962433	789624	5	39,123,83,74,600,	0,3558,4786,5441,14898,
#Partially deleted in new
chr11	1947343	1972793	chr11:1947343-1972793	1	+	1947362	1972762	789624	5	36,123,83,74,235,	0,3555,4783,5438,25215,
#Deleted in new
chr11	1947553	1956609	chr11:1947553-1956609	0	+	1947553	1947553	8553170	5	25,123,83,74,354,	0,3345,4573,5228,8702,
#Deleted in new
chr11	1949539	1951021	chr11:1949539-1951021	0	+	1949539	1949539	8553170	2	622,123,	0,1359,
#Deleted in new
chr11	1950898	1956609	chr11:1950898-1956609	0	+	1950898	1955685	789624	5	123,83,74,171,354,	0,1228,1883,4712,5357,
#Deleted in new
chr11	1950909	1953322	chr11:1950909-1953322	0	+	1950909	1950909	8553170	3	112,83,541,	0,1217,1872,
#Deleted in new
chr11	1955576	1956346	chr11:1955576-1956346	0	+	1955576	1955576	8553170	2	141,91,	0,679,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	1983236	1989920	chr11:1983236-1989920	3	-	1983236	1983236	789624	4	1449,133,199,95,	0,1613,2206,6589,
#Deleted in new
chr11	1991095	1993670	chr11:1991095-1993670	3	+	1991095	1991095	789624	3	164,343,416,	0,842,2159,
#Deleted in new
chr11	1995175	1997217	chr11:1995175-1997217	0	-	1995175	1995175	8553170	4	823,113,135,700,	0,903,1111,1342,
#Deleted in new
chr11	1995175	1997814	chr11:1995175-1997814	0	-	1995175	1995175	8553170	5	613,123,113,135,1297,	0,700,903,1111,1342,
#Deleted in new
chr11	1995175	1997875	chr11:1995175-1997875	3	-	1995175	1995175	789624	5	619,123,113,135,1358,	0,700,903,1111,1342,
#Deleted in new
chr11	1995175	1996740	chr11:1995175-1996740	0	-	1995175	1995175	8553170	4	619,113,135,223,	0,903,1111,1342,
#Deleted in new
chr11	1995175	1997460	chr11:1995175-1997460	0	-	1995175	1995175	8553170	5	619,123,113,131,943,	0,700,903,1111,1342,
#Deleted in new
chr11	1995175	1996191	chr11:1995175-1996191	0	-	1995175	1995175	8553170	3	619,66,113,	0,700,903,
#Deleted in new
chr11	1995429	2001470	chr11:1995429-2001470	0	-	1995429	1995429	789624	5	365,123,113,135,253,	0,446,649,857,5788,
#Deleted in new
chr11	1995438	1996571	chr11:1995438-1996571	0	-	1995438	1995438	8553170	4	356,316,135,54,	0,437,848,1079,
#Deleted in new
chr11	1995619	1996467	chr11:1995619-1996467	0	-	1995619	1995619	8553170	4	175,123,113,181,	0,256,459,667,
#Deleted in new
chr11	1995630	1996280	chr11:1995630-1996280	0	-	1995630	1995630	8553170	3	164,123,202,	0,245,448,
#Deleted in new
chr11	1996539	1996610	chr11:1996539-1996610	3	+	1996539	1996539	8553170	1	71,	0,
#Deleted in new
chr11	1996758	1996831	chr11:1996758-1996831	3	-	1996758	1996758	5263520	1	73,	0,
#Deleted in new
chr11	1997007	2001264	chr11:1997007-2001264	0	-	1997007	1997007	8553170	2	507,47,	0,4210,
#Deleted in new
chr11	1997075	1997875	chr11:1997075-1997875	0	-	1997075	1997075	8553170	2	439,36,	0,764,
#Deleted in new
chr11	1997483	1997552	chr11:1997483-1997552	3	+	1997483	1997483	8553170	1	69,	0,
#Deleted in new
chr11	2129111	2137290	chr11:2129111-2137290	1	-	2132986	2135523	0	4	4112,149,163,103,	0,4405,6255,8076,
#Deleted in new
chr11	2129111	2138974	chr11:2129111-2138974	1	-	2132986	2135523	0	4	4112,158,163,746,	0,4405,6255,9117,
#Deleted in new
chr11	2129111	2139389	chr11:2129111-2139389	1	-	2132986	2135523	0	4	4112,149,163,1161,	0,4405,6255,9117,
#Deleted in new
chr11	2129111	2149603	chr11:2129111-2149603	3	-	2132986	2135523	0	5	4112,149,163,242,478,	0,4405,6255,18454,20014,
#Deleted in new
chr11	2129111	2149603	chr11:2129111-2149603	3	-	2147611	2149379	789624	5	4112,149,163,242,478,	0,4405,6255,18454,20014,
#Deleted in new
chr11	2129120	2129964	chr11:2129120-2129964	3	-	2129120	2129120	8553170	2	329,44,	0,800,
#Deleted in new
chr11	2132499	2141238	chr11:2132499-2141238	1	-	2132986	2140296	0	5	724,149,163,165,382,	0,1017,2867,7635,8357,
#Partially deleted in new
chr11	2132537	2161209	chr11:2132537-2161209	0	-	2147611	2160971	789624	7	686,149,163,242,220,204,42,	0,979,2829,15028,16588,28247,28630,
#Deleted in new
chr11	2132639	2137287	chr11:2132639-2137287	1	-	2132986	2135523	0	4	584,158,163,100,	0,877,2727,4548,
#Deleted in new
chr11	2132672	2141016	chr11:2132672-2141016	1	-	2132986	2135523	0	4	551,149,163,160,	0,844,2694,8184,
#Deleted in new
chr11	2132715	2137305	chr11:2132715-2137305	1	-	2132986	2135523	0	4	508,149,163,114,	0,801,2651,4476,
#Deleted in new
chr11	2134133	2134209	chr11:2134133-2134209	3	-	2134133	2134133	5263520	1	76,	0,
#Deleted in new
chr11	2140500	2148642	chr11:2140500-2148642	0	+	2140500	2140500	789624	3	447,172,1325,	0,5855,6817,
#Deleted in new
chr11	2140516	2148666	chr11:2140516-2148666	3	+	2140516	2140516	789624	3	431,283,1349,	0,5728,6801,
#Deleted in new
chr11	2140643	2147807	chr11:2140643-2147807	0	+	2140643	2140643	8553170	2	304,1563,	0,5601,
#Partially deleted in new
chr11	2146622	2158658	chr11:2146622-2158658	0	-	2146622	2146622	8553170	4	123,242,220,392,	0,943,2503,11644,
#Partially deleted in new
chr11	2146625	2161209	chr11:2146625-2161209	3	-	2147611	2160971	789624	5	120,242,220,204,42,	0,940,2500,14159,14542,
#Partially deleted in new
chr11	2148933	2158336	chr11:2148933-2158336	0	-	2148933	2148933	8553170	2	412,70,	0,9333,
#Deleted in new
chr11	2159778	2161221	chr11:2159778-2161221	1	-	2159851	2160971	0	3	219,204,80,	0,1006,1363,
#Deleted in new
chr11	2159778	2161341	chr11:2159778-2161341	3	-	2159851	2160971	0	3	219,204,174,	0,1006,1389,
#Deleted in new
chr11	2159778	2161204	chr11:2159778-2161204	1	-	2159851	2160971	0	2	219,420,	0,1006,
#Deleted in new
chr11	2159782	2161158	chr11:2159782-2161158	0	-	2159782	2160971	789624	2	90,374,	0,1002,
#Deleted in new
chr11	2159851	2160971	chr11:2159851-2160971	1	-	2159851	2160971	789624	2	110,187,	0,933,
#Deleted in new
chr11	2163928	2171805	chr11:2163928-2171805	1	-	2164232	2171786	0	11	464,134,96,57,70,51,68,89,175,222,109,	0,1303,1739,2073,2551,3506,3937,4162,4562,5721,7768,
#Deleted in new
chr11	2163928	2171877	chr11:2163928-2171877	3	-	2164232	2171786	0	13	464,134,96,57,70,136,146,51,68,89,175,222,181,	0,1303,1739,2073,2551,2704,2958,3506,3937,4162,4562,5721,7768,
#Deleted in new
chr11	2163928	2171805	chr11:2163928-2171805	1	-	2164232	2171786	0	14	464,134,96,57,70,136,146,51,68,89,175,222,81,109,	0,1303,1739,2073,2551,2704,2958,3506,3937,4162,4562,5721,6761,7768,
#Deleted in new
chr11	2163928	2171805	chr11:2163928-2171805	1	-	2164232	2171786	0	14	464,134,96,57,70,136,146,51,68,89,175,222,81,121,	0,1303,1739,2073,2551,2704,2958,3506,3937,4162,4562,5721,6761,7756,
#Deleted in new
chr11	2165293	2171805	chr11:2165293-2171805	0	-	2169650	2171786	789624	12	72,96,57,70,136,146,51,68,89,175,46,109,	0,374,708,1186,1339,1593,2141,2572,2797,3197,4356,6403,
#Deleted in new
chr11	2165671	2167276	chr11:2165671-2167276	0	-	2165671	2165671	8553170	5	92,57,70,136,390,	0,330,808,961,1215,
#Deleted in new
chr11	2165678	2168106	chr11:2165678-2168106	0	-	2165678	2168106	789624	6	85,57,70,51,68,16,	0,323,801,1756,2187,2412,
#Deleted in new
chr11	2165678	2168106	chr11:2165678-2168106	0	-	2166767	2168106	789624	7	85,57,70,136,51,68,16,	0,323,801,954,1756,2187,2412,
#Deleted in new
chr11	2165852	2166774	chr11:2165852-2166774	0	-	2165852	2165852	8553170	2	697,142,	0,780,
#Deleted in new
chr11	2166006	2171805	chr11:2166006-2171805	0	-	2169650	2171786	789624	10	52,70,136,146,82,68,89,175,46,121,	0,473,626,880,1428,1859,2084,2484,3643,5678,
#Deleted in new
chr11	2166893	2168726	chr11:2166893-2168726	0	-	2166893	2166893	8553170	4	139,499,89,236,	0,541,1197,1597,
#Deleted in new
chr11	2173062	2173138	chr11:2173062-2173138	3	+	2173062	2173062	5263520	1	76,	0,
#Deleted in new
chr11	2268494	2270952	chr11:2268494-2270952	3	-	2269750	2270332	789624	2	632,1220,	0,1238,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	2295644	2302060	chr11:2295644-2302060	1	-	2299455	2301808	789624	4	2277,280,94,305,	0,3783,4875,6111,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	2297172	2301913	chr11:2297172-2301913	2	-	2299455	2301861	789624	5	749,280,94,85,158,	0,2255,3347,3511,4583,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	2297823	2303049	chr11:2297823-2303049	0	-	2297823	2297823	8553170	3	98,280,168,	0,1604,5058,
#Deleted in new
chr11	2299424	2301872	chr11:2299424-2301872	0	-	2299424	2299424	8553170	2	283,1189,	0,1259,
#Deleted in new
chr11	2301996	2310018	chr11:2301996-2310018	0	+	2302149	2309373	789624	6	226,115,98,75,190,30,	0,847,2110,6739,7324,7992,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	2302008	2318200	chr11:2302008-2318200	0	+	2302008	2302008	8553170	9	207,115,72,98,75,55,2183,182,338,	0,835,1401,2098,6727,11645,12476,15335,15854,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	2302012	2318142	chr11:2302012-2318142	3	+	2302149	2317924	789624	10	203,115,98,75,102,87,84,92,182,280,	0,831,2094,6723,11641,12472,14216,14563,15331,15850,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	2302012	2318142	chr11:2302012-2318142	0	+	2302149	2317457	789624	10	203,115,98,75,102,87,84,36,182,280,	0,831,2094,6723,11641,12472,14216,14619,15331,15850,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	2302012	2318200	chr11:2302012-2318200	1	+	2302867	2317924	789624	9	203,115,98,102,87,84,92,182,338,	0,831,2094,11641,12472,14216,14563,15331,15850,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	2302025	2318142	chr11:2302025-2318142	0	+	2302025	2302025	8553170	9	197,115,98,75,102,87,439,180,280,	0,818,2081,6710,11628,12459,14203,15320,15837,
#Partially deleted in new
chr11	2302030	2314634	chr11:2302030-2314634	0	+	2302030	2302030	8553170	6	185,115,98,75,102,150,	0,813,2076,6705,11623,12454,
#Partially deleted in new
chr11	2302039	2315956	chr11:2302039-2315956	0	+	2302039	2302039	8553170	7	176,115,98,75,102,87,88,	0,804,2067,6696,11614,12445,13829,
#Partially deleted in new
chr11	2302140	2316664	chr11:2302140-2316664	0	+	2302140	2302140	8553170	7	75,115,98,75,102,87,436,	0,703,1966,6595,11513,12344,14088,
#Partially deleted in new
chr11	2302146	2315660	chr11:2302146-2315660	0	+	2302146	2302146	8553170	6	69,115,98,102,87,415,	0,697,1960,11507,12338,13099,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	2302149	2318142	chr11:2302149-2318142	1	+	2302149	2317905	789624	9	66,115,98,75,102,87,84,92,280,	0,694,1957,6586,11504,12335,14079,14426,15713,
#Partially deleted in new
chr11	2302153	2314666	chr11:2302153-2314666	0	+	2302153	2302153	8553170	6	69,115,98,75,102,182,	0,690,1953,6582,11500,12331,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	2302707	2318142	chr11:2302707-2318142	0	+	2302810	2314540	789624	9	251,98,75,55,87,84,92,180,280,	0,1399,6028,10946,11777,13521,13868,14638,15155,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	2302722	2318142	chr11:2302722-2318142	1	+	2302810	2317924	789624	9	236,98,75,102,87,84,92,182,280,	0,1384,6013,10931,11762,13506,13853,14621,15140,
#Partially deleted in new
chr11	2302867	2317924	chr11:2302867-2317924	0	+	2302867	2317924	789624	8	91,98,102,87,84,92,182,62,	0,1239,10786,11617,13361,13708,14476,14995,
#Partially deleted in new
chr11	2306944	2316187	chr11:2306944-2316187	0	+	2306944	2306944	8553170	5	46,75,55,87,319,	0,1791,6709,7540,8924,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	2316635	2318142	chr11:2316635-2318142	0	+	2316635	2316635	8553170	3	32,99,280,	0,791,1227,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	2321717	2321827	chr11:2321717-2321827	3	+	2321717	2321717	8553170	1	110,	0,
#Partially deleted in new
chr11	2328748	2377992	chr11:2328748-2377992	3	-	2328748	2328748	8553170	3	944,109,407,	0,6162,48837,
#Partially deleted in new
chr11	2328748	2377989	chr11:2328748-2377989	0	-	2328748	2328748	789624	3	555,212,404,	0,814,48837,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	2335134	2347685	chr11:2335134-2347685	7	-	2335134	2335134	16724991	2	1038,140,	0,12411,
#Partially deleted in new
chr11	2335314	2335749	chr11:2335314-2335749	5	-	2335314	2335314	16724991	1	435,	0,
#Partially deleted in new
chr11	2376176	2395900	chr11:2376176-2395900	0	+	2394126	2395900	789624	6	181,115,98,75,105,32,	0,14235,17918,18795,19239,19692,
#Partially deleted in new
chr11	2376201	2395429	chr11:2376201-2395429	0	+	2394126	2395429	789624	6	156,100,115,98,75,14,	0,619,14210,17893,18770,19214,
#Partially deleted in new
chr11	2377293	2397419	chr11:2377293-2397419	3	+	2377549	2396866	0	8	322,115,98,75,105,102,87,616,	0,13118,16801,17678,18122,18575,19334,19510,
#Partially deleted in new
chr11	2379155	2395520	chr11:2379155-2395520	0	+	2379155	2395520	789624	5	51,115,98,75,105,	0,11256,14939,15816,16260,
#Partially deleted in new
chr11	2382459	2397016	chr11:2382459-2397016	1	+	2394126	2396866	789624	8	91,115,98,75,105,102,87,213,	0,7952,11635,12512,12956,13409,14168,14344,
#Partially deleted in new
chr11	2384649	2396908	chr11:2384649-2396908	0	+	2384649	2396866	789624	8	33,115,98,75,105,102,87,105,	0,5762,9445,10322,10766,11219,11978,12154,
#Partially deleted in new
chr11	2384662	2396906	chr11:2384662-2396906	0	+	2384662	2396777	789624	7	20,115,98,75,105,102,279,	0,5749,9432,10309,10753,11206,11965,
#Partially deleted in new
chr11	2385665	2395013	chr11:2385665-2395013	0	+	2385764	2395013	789624	4	141,115,98,42,	0,4746,8429,9306,
#Partially deleted in new
chr11	2386056	2396916	chr11:2386056-2396916	1	+	2386061	2396866	789624	9	100,85,115,98,75,105,102,87,113,	0,498,4355,8038,8915,9359,9812,10571,10747,
#Partially deleted in new
chr11	2386085	2396714	chr11:2386085-2396714	0	+	2386594	2396714	789624	7	554,115,98,75,105,102,87,	0,4326,8009,8886,9330,9783,10542,
#Deleted in new
chr11	2390094	2397304	chr11:2390094-2397304	1	+	2394126	2396866	789624	8	89,115,98,75,105,102,87,501,	0,317,4000,4877,5321,5774,6533,6709,
#Deleted in new
chr11	2390102	2395968	chr11:2390102-2395968	0	+	2390102	2390102	8553170	7	81,115,408,98,75,105,100,	0,309,972,3992,4869,5313,5766,
#Deleted in new
chr11	2390445	2395586	chr11:2390445-2395586	0	+	2390445	2390445	8553170	4	81,98,75,171,	0,3649,4526,4970,
#Deleted in new
chr11	2391382	2397396	chr11:2391382-2397396	0	+	2391382	2391382	8553170	2	2810,2425,	0,3589,
#Deleted in new
chr11	2393847	2396979	chr11:2393847-2396979	1	+	2393895	2396866	789624	6	345,75,105,102,87,176,	0,1124,1568,2021,2780,2956,
#Deleted in new
chr11	2394849	2397252	chr11:2394849-2397252	0	+	2394849	2394849	8553170	5	197,105,102,87,449,	0,566,1019,1778,1954,
#Deleted in new
chr11	2396312	2397299	chr11:2396312-2397299	0	+	2396312	2396312	8553170	2	402,496,	0,491,
#Deleted in new
chr11	2400487	2403878	chr11:2400487-2403878	1	+	2402633	2403623	789624	4	311,157,42,1034,	0,1806,2123,2357,
#Deleted in new
chr11	2400535	2403876	chr11:2400535-2403876	3	+	2402633	2403623	789624	3	263,157,1266,	0,1758,2075,
#Deleted in new
chr11	2400627	2403701	chr11:2400627-2403701	1	+	2402633	2403616	789624	6	171,172,157,42,305,145,	0,1348,1666,1983,2217,2929,
#Deleted in new
chr11	2400755	2403243	chr11:2400755-2403243	0	+	2402633	2403243	789624	4	43,141,157,633,	0,1083,1538,1855,
#Deleted in new
chr11	2400762	2402971	chr11:2400762-2402971	0	+	2402633	2402971	789624	4	36,309,157,361,	0,1076,1531,1848,
#Deleted in new
chr11	2401017	2402964	chr11:2401017-2402964	0	+	2402633	2402964	789624	3	468,157,354,	0,1276,1593,
#Deleted in new
chr11	2402099	2403448	chr11:2402099-2403448	0	+	2402633	2403448	789624	4	48,157,42,604,	0,194,511,745,
#Deleted in new
chr11	2402135	2403207	chr11:2402135-2403207	0	+	2402633	2403207	789624	2	315,597,	0,475,
#Deleted in new
chr11	2402292	2403875	chr11:2402292-2403875	1	+	2402633	2403623	789624	2	158,1265,	0,318,
#Deleted in new
chr11	2403100	2403876	chr11:2403100-2403876	0	+	2403100	2403100	8553170	2	49,360,	0,416,
#Partially deleted in new
chr11	2404514	2423045	chr11:2404514-2423045	3	-	2404936	2423036	789624	24	529,67,73,133,182,154,175,133,119,259,93,113,146,124,141,351,119,103,192,65,184,167,181,126,	0,1012,1504,2146,2604,3244,6837,7120,7620,8239,8619,8961,9546,10200,10392,10606,11391,13212,13652,14012,15707,16517,17626,18405,
#Deleted in new
chr11	2404514	2407908	chr11:2404514-2407908	3	+	2404514	2404514	8553170	2	319,85,	0,3309,
#Partially deleted in new
chr11	2404514	2423012	chr11:2404514-2423012	0	-	2404936	2423012	789624	24	529,67,73,133,182,154,175,133,119,259,93,113,146,124,141,351,119,103,192,65,184,173,181,93,	0,1012,1504,2146,2604,3244,6837,7120,7620,8239,8619,8961,9546,10200,10392,10606,11391,13212,13652,14012,15707,16511,17626,18405,
#Partially deleted in new
chr11	2404902	2423042	chr11:2404902-2423042	1	-	2404936	2423036	789624	24	141,67,97,133,182,154,175,133,119,259,93,113,146,124,141,351,119,103,192,65,184,167,181,123,	0,624,1116,1758,2216,2856,6449,6732,7232,7851,8231,8573,9158,9812,10004,10218,11003,12824,13264,13624,15319,16129,17238,18017,
#Partially deleted in new
chr11	2404908	2423042	chr11:2404908-2423042	1	-	2404936	2423036	789624	24	138,67,73,133,182,154,175,133,119,259,93,113,146,124,141,351,119,103,192,65,184,167,181,123,	0,618,1110,1752,2210,2850,6443,6726,7226,7845,8225,8567,9152,9806,9998,10212,10997,12818,13258,13618,15313,16123,17232,18011,
#Partially deleted in new
chr11	2444683	2572906	chr11:2444683-2572906	0	+	2444685	2572906	789624	7	25,102,91,127,79,97,61,	0,699,83244,125944,126641,127329,128162,
#Partially deleted in new
chr11	2444990	2849110	chr11:2444990-2849110	3	+	2445098	2848003	0	16	494,91,127,79,97,141,111,96,123,142,121,76,95,47,62,1344,	0,82937,125637,126334,127022,127855,138444,140221,142579,143722,216970,323853,330969,331995,332985,402776,
#Partially deleted in new
chr11	2445321	2527976	chr11:2445321-2527976	0	+	2445321	2445321	8553170	3	163,92,49,	0,76157,82606,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	2445452	2840190	chr11:2445452-2840190	0	+	2445452	2839748	789624	11	32,91,111,123,142,121,76,95,47,62,475,	0,82475,137982,142117,143260,216508,323391,330507,331533,332523,394263,
#Partially deleted in new
chr11	2461435	2848238	chr11:2461435-2848238	1	+	2461709	2848003	0	16	279,91,127,79,97,141,111,96,123,142,121,76,95,47,62,472,	0,66492,109192,109889,110577,111410,121999,123776,126134,127277,200525,307408,314524,315550,316540,386331,
#Partially deleted in new
chr11	2461886	2527973	chr11:2461886-2527973	0	+	2461893	2527973	789624	3	91,92,46,	0,59592,66041,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	2608327	2699994	chr11:2608327-2699994	3	-	2608327	2608327	789624	1	91667,	0,
#Deleted in new
chr11	2652098	2652562	chr11:2652098-2652562	3	+	2652098	2652098	8553170	1	464,	0,
#Deleted in new
chr11	2674096	2674292	chr11:2674096-2674292	3	+	2674096	2674096	8553170	1	196,	0,
#Deleted in new
chr11	2674624	2674740	chr11:2674624-2674740	3	+	2674624	2674624	8553170	1	116,	0,
#Deleted in new
chr11	2697850	2698076	chr11:2697850-2698076	3	+	2697850	2697850	8553170	1	226,	0,
#Deleted in new
chr11	2771355	2771577	chr11:2771355-2771577	7	+	2771355	2771355	16724991	1	222,	0,
#Partially deleted in new
chr11	2777574	2848293	chr11:2777574-2848293	1	+	2777677	2848003	789624	3	239,62,527,	0,401,70192,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	2840134	2861568	chr11:2840134-2861568	3	-	2840134	2840134	789624	3	308,197,579,	0,18608,20855,
#Deleted in new
chr11	2870032	2872105	chr11:2870032-2872105	3	+	2870032	2870032	789624	2	832,261,	0,1812,
#Deleted in new
chr11	2871436	2871498	chr11:2871436-2871498	3	+	2871436	2871436	8553170	1	62,	0,
#Deleted in new
chr11	2883212	2885771	chr11:2883212-2885771	3	-	2884003	2885489	789624	3	698,136,1102,	0,786,1457,
#Deleted in new
chr11	2883217	2885765	chr11:2883217-2885765	1	-	2884003	2885489	789624	3	698,136,1096,	0,781,1452,
#Deleted in new
chr11	2883217	2885773	chr11:2883217-2885773	1	-	2884003	2885456	789624	4	698,136,797,140,	0,781,1452,2416,
#Deleted in new
chr11	2883239	2885749	chr11:2883239-2885749	1	-	2883910	2885456	789624	4	676,136,265,116,	0,759,1962,2394,
#Deleted in new
chr11	2883631	2885728	chr11:2883631-2885728	1	-	2883773	2885456	789624	4	279,136,265,95,	0,367,1570,2002,
#Deleted in new
chr11	2883674	2884701	chr11:2883674-2884701	0	-	2883674	2883674	8553170	2	241,703,	0,324,
#Partially deleted in new
chr11	2887779	2903740	chr11:2887779-2903740	1	-	2888179	2899701	789624	4	856,395,126,282,	0,11616,14804,15679,
#Partially deleted in new
chr11	2888094	2889430	chr11:2888094-2889430	1	-	2888179	2888632	789624	2	541,123,	0,1213,
#Partially deleted in new
chr11	2888096	2903490	chr11:2888096-2903490	3	-	2888179	2888632	789624	3	539,126,32,	0,14487,15362,
#Partially deleted in new
chr11	2899720	2925246	chr11:2899720-2925246	3	+	2903345	2925197	789624	11	86,276,98,161,133,119,108,101,102,121,237,	0,3493,8512,9475,9857,16901,18267,19586,22381,22715,25289,
#Partially deleted in new
chr11	2902192	2925246	chr11:2902192-2925246	1	+	2903345	2925197	789624	11	172,276,98,161,133,119,108,101,102,121,237,	0,1021,6040,7003,7385,14429,15795,17114,19909,20243,22817,
#Partially deleted in new
chr11	2902281	2925241	chr11:2902281-2925241	1	+	2903345	2925197	789624	11	83,276,98,161,133,119,108,101,102,121,232,	0,932,5951,6914,7296,14340,15706,17025,19820,20154,22728,
#Partially deleted in new
chr11	2902282	2925227	chr11:2902282-2925227	1	+	2903345	2925197	789624	9	82,276,98,119,108,101,102,121,218,	0,931,5950,14339,15705,17024,19819,20153,22727,
#Partially deleted in new
chr11	2902419	2925246	chr11:2902419-2925246	1	+	2903345	2925197	789624	11	299,276,98,161,133,119,108,101,102,121,237,	0,794,5813,6776,7158,14202,15568,16887,19682,20016,22590,
#Partially deleted in new
chr11	2903113	2909356	chr11:2903113-2909356	0	+	2903345	2909356	789624	3	376,98,161,	0,5119,6082,
#Partially deleted in new
chr11	2903375	2916386	chr11:2903375-2916386	0	+	2903375	2903375	8553170	5	114,98,161,133,178,	0,4857,5820,6202,12833,
#Deleted in new
chr11	2909272	2909818	chr11:2909272-2909818	0	+	2909272	2909272	8553170	2	84,241,	0,305,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	2916145	2921238	chr11:2916145-2921238	0	+	2916145	2916145	8553170	3	595,108,1932,	0,1842,3161,
#Partially deleted in new
chr11	2916235	2925102	chr11:2916235-2925102	0	+	2916235	2916235	8553170	6	505,108,101,102,121,93,	0,1752,3071,5866,6200,8774,
#Partially deleted in new
chr11	2916642	2921826	chr11:2916642-2921826	0	+	2916642	2916642	8553170	4	98,108,101,475,	0,1345,2664,4709,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	2916681	2925246	chr11:2916681-2925246	0	+	2916681	2916681	8553170	7	59,108,103,101,102,121,237,	0,1306,2224,2625,5420,5754,8328,
#Partially deleted in new
chr11	2916947	2925183	chr11:2916947-2925183	0	+	2916947	2916947	8553170	6	76,108,101,102,121,174,	0,1040,2359,5154,5488,8062,
#Deleted in new
chr11	2921967	2925240	chr11:2921967-2925240	0	+	2921967	2921967	8553170	3	236,121,231,	0,468,3042,
#Deleted in new
chr11	2928272	2929455	chr11:2928272-2929455	3	-	2928905	2929364	789624	2	395,560,	0,623,
#Deleted in new
chr11	2928416	2929420	chr11:2928416-2929420	1	-	2928905	2929364	789624	2	251,525,	0,479,
#Partially deleted in new
chr11	2944430	2992377	chr11:2944430-2992377	1	-	2945607	2979220	789624	15	1216,57,30,120,23,146,140,72,132,87,142,100,59,31,124,	0,6828,7349,10096,11313,13968,15339,20249,25372,27017,27671,31593,33853,34776,47823,
#Partially deleted in new
chr11	2944436	2992377	chr11:2944436-2992377	3	-	2949258	2979220	789624	16	1210,38,57,30,120,23,146,140,72,132,87,142,100,59,31,124,	0,4790,6822,7343,10090,11307,13962,15333,20243,25366,27011,27665,31587,33847,34770,47817,
#Deleted in new
chr11	2944437	2952769	chr11:2944437-2952769	0	-	2944437	2944437	8553170	4	1209,38,57,990,	0,4789,6821,7342,
#Deleted in new
chr11	2945062	2951295	chr11:2945062-2951295	0	-	2945062	2945062	8553170	4	584,38,48,37,	0,4164,5906,6196,
#Partially deleted in new
chr11	2945111	2992377	chr11:2945111-2992377	1	-	2945607	2979220	789624	16	535,57,30,120,23,146,140,72,132,87,142,100,59,31,143,124,	0,6147,6668,9415,10632,13287,14658,19568,24691,26336,26990,30912,33172,34095,44017,47142,
#Partially deleted in new
chr11	2945330	2955790	chr11:2945330-2955790	0	-	2945330	2945330	8553170	5	316,57,30,120,47,	0,5928,6449,9196,10413,
#Deleted in new
chr11	2945434	2952037	chr11:2945434-2952037	0	-	2945434	2945434	8553170	5	212,38,57,30,140,	0,3792,5824,6345,6463,
#Partially deleted in new
chr11	2945596	2969904	chr11:2945596-2969904	0	-	2954398	2969904	789624	10	50,57,30,110,120,23,146,140,72,102,	0,5662,6183,8704,8930,10147,12802,14173,19083,24206,
#Partially deleted in new
chr11	2954303	2964712	chr11:2954303-2964712	0	-	2954303	2954303	8553170	5	343,23,146,140,33,	0,1440,4095,5466,10376,
#Partially deleted in new
chr11	2954487	2960131	chr11:2954487-2960131	0	-	2954487	2954487	8553170	4	159,23,146,362,	0,1256,3911,5282,
#Partially deleted in new
chr11	2954561	2958934	chr11:2954561-2958934	0	-	2954561	2954561	8553170	3	85,23,536,	0,1182,3837,
#Partially deleted in new
chr11	2958483	2992300	chr11:2958483-2992300	0	-	2958483	2979220	789624	8	61,140,39,49,100,59,31,47,	0,1286,6196,13711,17540,19800,20723,33770,
#Partially deleted in new
chr11	2958490	2992288	chr11:2958490-2992288	0	-	2958490	2979220	789624	10	54,140,72,132,87,178,100,59,31,35,	0,1279,6189,11312,12957,13611,17533,19793,20716,33763,
#Deleted in new
chr11	2963770	2963893	chr11:2963770-2963893	3	-	2963770	2963770	789624	1	123,	0,
#Partially deleted in new
chr11	2964724	2992300	chr11:2964724-2992300	0	-	2964724	2976103	789624	7	27,132,87,142,100,59,47,	0,5078,6723,7377,11299,13559,27529,
#Partially deleted in new
chr11	2969802	2992102	chr11:2969802-2992102	0	-	2969802	2979220	789624	7	132,87,142,100,59,31,309,	0,1645,2299,6221,8481,9404,21991,
#Partially deleted in new
chr11	2969864	2992258	chr11:2969864-2992258	0	-	2969864	2979220	789624	7	70,87,178,100,59,31,30,	0,1583,2237,6159,8419,9342,22364,
#Partially deleted in new
chr11	2969915	2992258	chr11:2969915-2992258	0	-	2969915	2979220	789624	9	19,87,142,100,59,31,50,69,30,	0,1532,2186,6108,8368,9291,18161,19213,22313,
#Partially deleted in new
chr11	2971449	2989268	chr11:2971449-2989268	0	-	2971449	2979220	789624	7	85,142,100,59,31,68,140,	0,652,4574,6834,7757,12296,17679,
#Partially deleted in new
chr11	2971528	2992259	chr11:2971528-2992259	0	-	2971528	2979220	789624	9	6,142,100,59,31,50,69,84,31,	0,573,4495,6755,7678,16548,17600,19380,20700,
#Partially deleted in new
chr11	2972148	2989159	chr11:2972148-2989159	0	-	2972148	2979220	789624	5	131,100,59,31,31,	0,3875,6135,7058,16980,
#Partially deleted in new
chr11	2972180	2992258	chr11:2972180-2992258	0	-	2972180	2979220	789624	8	63,100,59,31,68,50,143,30,	0,3843,6103,7026,11565,15896,16948,20048,
#Deleted in new
chr11	2989862	2991344	chr11:2989862-2991344	3	+	2989862	2989862	8553170	1	1482,	0,
#Partially deleted in new
chr11	3000921	3057437	chr11:3000921-3057437	1	-	3001113	3057367	789624	23	327,84,60,68,81,82,69,190,98,104,130,129,113,122,89,141,150,99,97,89,92,249,95,	0,1048,1619,4444,5957,11273,14859,16184,16935,17486,17698,18217,19298,25754,28074,28381,37128,38272,38913,39974,41243,46831,56421,
#Partially deleted in new
chr11	3000921	3057613	chr11:3000921-3057613	3	-	3001113	3057367	789624	22	327,84,60,68,81,82,69,190,98,104,130,129,113,122,89,141,150,99,97,89,92,271,	0,1048,1619,4444,5957,11273,14859,16184,16935,17486,17698,18217,19298,25754,28074,28381,37128,38272,38913,39974,41243,56421,
#Partially deleted in new
chr11	3000921	3057437	chr11:3000921-3057437	0	-	3041010	3057367	789624	23	327,84,60,68,81,82,69,190,98,104,130,129,113,122,89,141,150,99,97,136,92,249,95,	0,1048,1619,4444,5957,11273,14859,16184,16935,17486,17698,18217,19298,25754,28074,28381,37128,38272,38913,39974,41243,46831,56421,
#Partially deleted in new
chr11	3000928	3057418	chr11:3000928-3057418	1	-	3001187	3057367	789624	22	320,92,60,68,81,82,69,190,98,104,130,129,113,122,89,141,150,99,97,89,92,76,	0,1033,1612,4437,5950,11266,14852,16177,16928,17479,17691,18210,19291,25747,28067,28374,37121,38265,38906,39967,41236,56414,
#Partially deleted in new
chr11	3000928	3007010	chr11:3000928-3007010	0	-	3000928	3000928	8553170	4	320,631,68,132,	0,1041,4437,5950,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	3000929	3008897	chr11:3000929-3008897	0	-	3000929	3000929	8553170	5	319,205,60,68,2019,	0,1040,1611,4436,5949,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	3000929	3009533	chr11:3000929-3009533	0	-	3000929	3000929	8553170	5	319,84,68,81,1914,	0,1040,4436,5949,6690,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr11	3000929	3057380	chr11:3000929-3057380	0	-	3000929	3000929	8553170	19	319,84,60,68,81,82,69,1435,130,129,113,2409,141,150,99,97,136,92,38,	0,1040,1611,4436,5949,11265,14851,16176,17690,18209,19290,25746,28373,37120,38264,38905,39966,41235,56413,
#Partially deleted in new
chr11	3000929	3057402	chr11:3000929-3057402	1	-	3001187	3054940	789624	23	319,92,60,68,81,82,69,190,98,104,130,129,113,122,89,141,150,99,97,89,92,163,60,	0,1032,1611,4436,5949,11265,14851,16176,16927,17478,17690,18209,19290,25746,28066,28373,37120,38264,38905,39966,41235,53947,56413,
#Partially deleted in new
chr11	3019189	3029057	chr11:3019189-3029057	0	-	3019189	3019189	8553170	4	78,113,122,345,	0,1030,7486,9523,
#Deleted in new
chr11	3029008	3029753	chr11:3029008-3029753	0	+	3029008	3029008	8553170	2	19,35,	0,710,
#Partially deleted in new
chr11	3029083	3057429	chr11:3029083-3057429	0	-	3041010	3057367	789624	7	360,150,99,97,136,92,87,	0,8966,10110,10751,11812,13081,28259,
#Partially deleted in new
chr11	3029393	3041260	chr11:3029393-3041260	3	+	3029393	3029393	789624	2	2183,481,	0,11386,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	3038130	3040088	chr11:3038130-3040088	0	-	3038130	3038130	8553170	3	69,99,254,	0,1063,1704,
#Partially deleted in new
chr11	3039193	3057441	chr11:3039193-3057441	0	-	3039193	3039193	8553170	5	99,97,89,166,99,	0,641,1702,2971,18149,
#Partially deleted in new
chr11	3039214	3057416	chr11:3039214-3057416	0	-	3040556	3057367	789624	6	78,97,134,89,92,74,	0,620,1233,1681,2950,18128,
#Partially deleted in new
chr11	3040523	3057437	chr11:3040523-3057437	0	-	3040523	3040523	8553170	5	58,89,92,249,95,	0,372,1641,7229,16819,
#Partially deleted in new
chr11	3041013	3057367	chr11:3041013-3057367	1	-	3041013	3057367	789624	3	18,92,25,	0,1151,16329,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	3048358	3048521	chr11:3048358-3048521	3	-	3048358	3048358	8553170	1	163,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	3057537	3064707	chr11:3057537-3064707	3	+	3057537	3057537	8553170	2	118,2389,	0,4781,
#Partially deleted in new
chr11	3084392	3085443	chr11:3084392-3085443	7	-	3084392	3084392	16724991	2	338,392,	0,659,
#Partially deleted in new
chr11	3087115	3165354	chr11:3087115-3165354	3	-	3088204	3129148	789624	22	1228,103,139,127,186,137,90,98,99,97,99,82,185,193,175,85,204,102,81,83,157,139,	0,2730,3442,5316,5751,6411,6630,7121,13042,14487,15067,16123,17077,20147,20655,32431,33305,34881,35232,39357,41897,78100,
#Partially deleted in new
chr11	3087115	3094879	chr11:3087115-3094879	1	-	3088204	3094317	789624	8	1228,103,139,127,186,137,90,643,	0,2730,3442,5316,5751,6411,6630,7121,
#Partially deleted in new
chr11	3087120	3165300	chr11:3087120-3165300	1	-	3088204	3129148	789624	21	1223,103,139,127,186,137,90,98,99,97,99,82,185,193,175,85,102,81,83,157,78,	0,2725,3437,5311,5746,6406,6625,7116,13037,14482,15062,16118,17072,20142,20650,32426,34876,35227,39352,41892,78102,
#Partially deleted in new
chr11	3087378	3102266	chr11:3087378-3102266	0	-	3088204	3102266	789624	12	405,166,103,139,127,186,137,90,98,99,97,84,	0,799,2467,3179,5053,5488,6148,6367,6858,12779,14224,14804,
#Partially deleted in new
chr11	3087579	3090722	chr11:3087579-3090722	0	-	3087579	3087579	8553170	3	764,103,165,	0,2266,2978,
#Partially deleted in new
chr11	3087905	3126608	chr11:3087905-3126608	1	-	3088204	3126547	789624	20	438,103,139,127,186,137,90,98,99,97,99,82,185,193,175,85,81,102,81,136,	0,1940,2652,4526,4961,5621,5840,6331,12252,13697,14277,15333,16287,19357,19865,31641,32638,34091,34442,38567,
#Partially deleted in new
chr11	3087915	3165300	chr11:3087915-3165300	0	-	3104235	3129148	789624	18	428,103,139,127,186,137,90,98,99,97,99,82,59,32,81,83,157,85,	0,1930,2642,4516,4951,5611,5830,6321,12242,13687,14267,15323,16277,34151,34432,38557,41097,77300,
#Partially deleted in new
chr11	3088000	3165352	chr11:3088000-3165352	1	-	3088204	3129148	789624	21	343,103,139,127,186,137,90,98,99,97,99,82,185,193,175,85,102,81,83,157,137,	0,1845,2557,4431,4866,5526,5745,6236,12157,13602,14182,15238,16192,19262,19770,31546,33996,34347,38472,41012,77215,
#Partially deleted in new
chr11	3093384	3166739	chr11:3093384-3166739	0	-	3093384	3093384	8553170	17	279,90,98,99,97,99,82,185,193,175,85,204,102,81,83,157,115,	0,361,852,6773,8218,8798,9854,10808,13878,14386,26162,27036,28612,28963,33088,35628,73240,
#Partially deleted in new
chr11	3107789	3119987	chr11:3107789-3119987	0	-	3107789	3107789	8553170	2	156,441,	0,11757,
#Partially deleted in new
chr11	3119546	3126594	chr11:3119546-3126594	0	-	3119546	3119546	8553170	5	85,204,102,81,122,	0,874,2450,2801,6926,
#Partially deleted in new
chr11	3120607	3165336	chr11:3120607-3165336	0	-	3120607	3129148	789624	6	17,102,81,83,157,114,	0,1389,1740,5865,8405,44615,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	3121803	3165273	chr11:3121803-3165273	0	-	3121803	3121803	8553170	5	295,81,83,157,58,	0,544,4669,7209,43412,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	3121805	3126644	chr11:3121805-3126644	0	-	3121805	3121805	8553170	2	623,172,	0,4667,
#Partially deleted in new
chr11	3122025	3129329	chr11:3122025-3129329	0	-	3122025	3129148	789624	4	73,81,83,317,	0,322,4447,6987,
#Partially deleted in new
chr11	3122353	3165770	chr11:3122353-3165770	0	-	3122353	3129148	789624	4	75,83,157,260,	0,4119,6659,43157,
#Partially deleted in new
chr11	3122378	3164423	chr11:3122378-3164423	0	-	3122378	3129148	789624	4	50,83,157,484,	0,4094,6634,41561,
#Partially deleted in new
chr11	3126482	3161393	chr11:3126482-3161393	0	-	3126482	3129148	789624	3	73,157,476,	0,2530,34435,
#Partially deleted in new
chr11	3146179	3165300	chr11:3146179-3165300	0	-	3146179	3146179	8553170	2	482,85,	0,19036,
#Deleted in new
chr11	3189545	3189929	chr11:3189545-3189929	3	+	3189545	3189545	8553170	2	73,220,	0,164,
#Deleted in new
chr11	3217943	3218813	chr11:3217943-3218813	3	-	3217943	3218813	789624	1	870,	0,
#Partially deleted in new
chr11	3218331	3223131	chr11:3218331-3223131	0	+	3218331	3218331	789624	2	228,1562,	0,3238,
#Partially deleted in new
chr11	3218366	3221797	chr11:3218366-3221797	0	+	3218366	3218366	8553170	3	193,133,228,	0,1860,3203,
#Partially deleted in new
chr11	3218387	3223126	chr11:3218387-3223126	3	+	3218387	3218387	8553170	3	172,89,1557,	0,1312,3182,
#Partially deleted in new
chr11	3226060	3232838	chr11:3226060-3232838	3	+	3226060	3226060	8553170	3	122,87,226,	0,255,6552,
#Partially deleted in new
chr11	3227697	3232386	chr11:3227697-3232386	3	-	3227860	3228799	789624	2	1163,246,	0,4443,
#Deleted in new
chr11	3276044	3276390	chr11:3276044-3276390	7	+	3276044	3276044	16724991	1	346,	0,
#Deleted in new
chr11	3289310	3289642	chr11:3289310-3289642	7	-	3289310	3289310	16724991	1	332,	0,
#Deleted in new
chr11	3321861	3322202	chr11:3321861-3322202	7	+	3321861	3321861	16724991	1	341,	0,
#Deleted in new
chr11	3335124	3335407	chr11:3335124-3335407	7	-	3335124	3335124	16724991	1	283,	0,
#Partially deleted in new
chr11	3336720	3340630	chr11:3336720-3340630	3	+	3336720	3336720	8553170	2	95,688,	0,3222,
#Partially deleted in new
chr11	3339260	3379133	chr11:3339260-3379133	1	-	3339808	3379040	789624	4	562,96,127,96,	0,31714,32316,39777,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	3357926	3379145	chr11:3357926-3379145	1	-	3359117	3379040	789624	4	2639,96,127,108,	0,13048,13650,21111,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	3357927	3379222	chr11:3357927-3379222	1	-	3359117	3373591	789624	5	2638,96,127,99,185,	0,13047,13649,15649,21110,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	3357927	3379222	chr11:3357927-3379222	3	-	3359117	3373591	789624	7	2638,69,147,96,127,80,185,	0,2792,3815,13047,13649,15649,21110,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	3358102	3379181	chr11:3358102-3379181	0	-	3358102	3358102	8553170	5	2463,7113,96,127,144,	0,3640,12872,13474,20935,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	3358765	3379167	chr11:3358765-3379167	1	-	3359117	3379040	789624	6	1800,69,147,96,127,130,	0,1954,2977,12209,12811,20272,
#Partially deleted in new
chr11	3358944	3379218	chr11:3358944-3379218	1	-	3359117	3373591	789624	6	1621,96,127,80,284,181,	0,12030,12632,14632,18672,20093,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	3358993	3379116	chr11:3358993-3379116	1	-	3359117	3379040	789624	5	1572,147,96,127,79,	0,2749,11981,12583,20044,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	3359116	3379146	chr11:3359116-3379146	1	-	3359117	3373591	789624	6	1449,147,96,127,80,109,	0,2626,11858,12460,14460,19921,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	3359996	3379126	chr11:3359996-3379126	1	-	3362567	3373591	789624	6	569,57,96,127,80,89,	0,2549,10978,11580,13580,19041,
#Partially deleted in new
chr11	3360038	3379139	chr11:3360038-3379139	0	-	3360038	3373591	789624	6	527,69,96,127,80,102,	0,681,10936,11538,13538,18999,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	3360282	3379138	chr11:3360282-3379138	0	-	3362567	3373591	789624	7	283,147,57,96,127,80,101,	0,1460,2263,10692,11294,13294,18755,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	3360315	3371147	chr11:3360315-3371147	0	-	3360315	3360315	8553170	3	250,147,173,	0,1427,10659,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	3360319	3379109	chr11:3360319-3379109	0	-	3370960	3379040	789624	5	246,147,128,127,72,	0,1423,10623,11257,18718,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	3360343	3379152	chr11:3360343-3379152	0	-	3360343	3379040	789624	6	222,147,57,96,127,115,	0,1399,1632,10631,11233,18694,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	3360349	3371071	chr11:3360349-3371071	0	-	3362011	3371071	789624	4	216,147,98,97,	0,1393,1626,10625,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	3360384	3362720	chr11:3360384-3362720	0	-	3360384	3360384	8553170	4	181,69,147,188,	0,335,1358,2148,
#Partially deleted in new
chr11	3360410	3379139	chr11:3360410-3379139	0	-	3360410	3373591	789624	5	155,96,127,99,102,	0,10564,11166,13166,18627,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	3360415	3362831	chr11:3360415-3362831	0	-	3360415	3360415	8553170	3	150,147,286,	0,1327,2130,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	3360452	3367119	chr11:3360452-3367119	0	-	3360452	3360452	8553170	2	113,429,	0,6238,
#Partially deleted in new
chr11	3360477	3379100	chr11:3360477-3379100	0	-	3360477	3377664	789624	5	88,96,127,186,63,	0,10497,11099,17139,18560,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	3362017	3379130	chr11:3362017-3379130	0	-	3369485	3379040	789624	6	56,57,146,96,127,93,	0,528,7339,8957,9559,17020,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	3362567	3379139	chr11:3362567-3379139	1	-	3362567	3373591	789624	5	35,96,127,80,102,	0,8407,9009,11009,16470,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	3363317	3379146	chr11:3363317-3379146	0	-	3363317	3363317	8553170	5	74,96,127,80,109,	0,7657,8259,10259,15720,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	3366843	3379146	chr11:3366843-3379146	0	-	3366843	3379040	789624	4	214,96,127,109,	0,4131,4733,12194,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	3366945	3379102	chr11:3366945-3379102	0	-	3369485	3379040	789624	6	112,64,146,96,127,65,	0,1846,2411,4029,4631,12092,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	3368820	3379218	chr11:3368820-3379218	0	-	3368820	3373591	789624	5	35,96,127,80,181,	0,2154,2756,4756,10217,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	3369240	3379134	chr11:3369240-3379134	0	-	3369240	3369240	8553170	4	262,96,127,97,	0,1734,2336,9797,
#Partially deleted in new
chr11	3370979	3379154	chr11:3370979-3379154	0	-	3370979	3370979	8553170	5	91,127,80,166,117,	0,597,2597,4517,8058,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	3380960	3408978	chr11:3380960-3408978	7	+	3380960	3380960	16724991	9	84,85,118,290,109,117,42,1199,293,	0,2501,3206,16156,20798,21652,21954,25538,27725,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	3380977	3398090	chr11:3380977-3398090	4	+	3380977	3380977	16724991	4	67,85,118,974,	0,2484,3189,16139,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	3383461	3397239	chr11:3383461-3397239	4	+	3383461	3383461	16724991	6	85,118,70,74,176,151,	0,705,1437,9624,12251,13627,
#Partially deleted in new
chr11	3383461	3408961	chr11:3383461-3408961	4	+	3383461	3383461	16724991	10	85,118,109,117,42,60,110,217,76,276,	0,705,18297,19151,19453,20131,21392,23037,24160,25224,
#Deleted in new
chr11	3390779	3391752	chr11:3390779-3391752	7	-	3390779	3390779	16724991	1	973,	0,
#Partially deleted in new
chr11	3401758	3408810	chr11:3401758-3408810	5	+	3401758	3401758	16724991	7	109,117,60,110,112,76,125,	0,854,1834,3095,4740,5863,6927,
#Partially deleted in new
chr11	3410351	3422496	chr11:3410351-3422496	7	-	3410351	3410351	16724991	8	98,150,266,134,102,81,44,96,	0,3503,4479,4827,6188,7847,9851,12049,
#Partially deleted in new
chr11	3429757	3500621	chr11:3429757-3500621	7	-	3429757	3429757	16724991	4	193,622,139,156,	0,7485,17415,70708,
#Partially deleted in new
chr11	3469318	3531328	chr11:3469318-3531328	3	+	3469318	3469318	8553170	3	90,120,240,	0,13544,61770,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	3481519	3581211	chr11:3481519-3581211	3	-	3481519	3481519	8553170	5	220,158,136,184,285,	0,1298,18946,26693,99407,
#Deleted in new
chr11	3531419	3531608	chr11:3531419-3531608	7	+	3531419	3531419	16724991	1	189,	0,
#Partially deleted in new
chr11	3549744	3550519	chr11:3549744-3550519	7	-	3549744	3549744	16724991	1	775,	0,
#Partially deleted in new
chr11	3559656	3560022	chr11:3559656-3560022	7	+	3559656	3559656	16724991	1	366,	0,
#Partially deleted in new
chr11	3580926	3581135	chr11:3580926-3581135	7	-	3580926	3580926	16724991	1	209,	0,
#Deleted in new
chr11	3591276	3591615	chr11:3591276-3591615	7	-	3591276	3591276	16724991	1	339,	0,
#Deleted in new
chr11	3599594	3600706	chr11:3599594-3600706	7	-	3599594	3599594	16724991	1	1112,	0,
#Partially deleted in new
chr11	3609900	3637549	chr11:3609900-3637549	7	+	3609900	3609900	16724991	17	89,173,73,61,156,46,717,213,165,175,201,163,97,193,128,134,389,	0,332,1280,4065,4681,5698,6807,10286,11440,12741,16479,16771,18822,24391,25144,26206,27260,
#Partially deleted in new
chr11	3626483	3637559	chr11:3626483-3637559	5	+	3626483	3626483	16724991	7	97,163,193,128,79,130,399,	0,188,7808,8561,8791,9623,10677,
#Partially deleted in new
chr11	3638502	3642255	chr11:3638502-3642255	1	-	3638737	3641862	789624	4	291,33,730,450,	0,500,1139,3303,
#Partially deleted in new
chr11	3638511	3641992	chr11:3638511-3641992	1	-	3638815	3641862	789624	4	408,33,526,187,	0,491,1334,3294,
#Partially deleted in new
chr11	3638513	3642316	chr11:3638513-3642316	3	-	3638737	3641862	789624	5	280,33,730,59,139,	0,489,1128,3292,3664,
#Deleted in new
chr11	3638764	3640297	chr11:3638764-3640297	0	-	3638815	3640297	789624	3	155,33,656,	0,238,877,
#Deleted in new
chr11	3639010	3640365	chr11:3639010-3640365	0	-	3639010	3640365	789624	3	25,154,276,	0,631,1079,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	3645127	3659612	chr11:3645127-3659612	0	+	3645127	3645127	8553170	4	52,152,115,30,	0,10376,14034,14455,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	3645130	3664416	chr11:3645130-3664416	3	+	3659213	3664189	789624	5	49,115,781,42,325,	0,14031,14452,16241,18961,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	3663814	3663911	chr11:3663814-3663911	3	-	3663814	3663814	8553170	1	97,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	3665163	3665259	chr11:3665163-3665259	3	-	3665163	3665163	8553170	1	96,	0,
#Partially deleted in new
chr11	3665586	3671384	chr11:3665586-3671384	3	-	3666106	3671312	789624	5	978,533,155,146,133,	0,1645,3609,4209,5665,
#Partially deleted in new
chr11	3666035	3671367	chr11:3666035-3671367	0	-	3669328	3671312	789624	5	529,533,155,208,116,	0,1196,3160,3698,5216,
#Partially deleted in new
chr11	3666035	3671367	chr11:3666035-3671367	1	-	3666540	3667579	789624	5	529,533,155,141,116,	0,1196,3160,3698,5216,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	3668499	3669887	chr11:3668499-3669887	0	-	3668499	3668499	8553170	2	851,154,	0,1234,
#Partially deleted in new
chr11	3671082	3679687	chr11:3671082-3679687	0	-	3671381	3679687	789624	3	334,112,134,	0,5426,8471,
#Partially deleted in new
chr11	3675009	3797792	chr11:3675009-3797792	3	-	3676158	3782117	0	33	1367,112,155,242,222,143,144,158,267,230,430,157,183,165,178,139,114,299,117,188,134,141,93,88,138,164,181,108,140,177,102,104,393,	0,1499,4544,8190,10963,16337,18222,20439,24072,25600,27453,30190,31435,37554,38808,44402,45702,48147,50093,56381,60181,69499,78306,85529,87892,93571,96738,98622,100872,103863,104146,107032,122390,
#Partially deleted in new
chr11	3675010	3797792	chr11:3675010-3797792	1	-	3676158	3782117	0	33	1366,112,155,242,222,143,144,158,267,230,430,157,183,165,178,139,114,299,117,188,134,141,93,139,138,164,181,108,140,177,102,104,393,	0,1498,4543,8189,10962,16336,18221,20438,24071,25599,27452,30189,31434,37553,38807,44401,45701,48146,50092,56380,60180,69498,78305,85477,87891,93570,96737,98621,100871,103862,104145,107031,122389,
#Partially deleted in new
chr11	3675798	3797458	chr11:3675798-3797458	1	-	3676158	3782117	0	32	578,112,155,242,143,144,158,267,230,430,157,183,165,178,139,114,299,117,188,134,141,93,88,138,164,181,108,140,177,102,104,59,	0,710,3755,7401,15548,17433,19650,23283,24811,26664,29401,30646,36765,38019,43613,44913,47358,49304,55592,59392,68710,77517,84740,87103,92782,95949,97833,100083,103074,103357,106243,121601,
#Partially deleted in new
chr11	3675877	3706535	chr11:3675877-3706535	0	-	3676158	3706535	789624	13	499,112,155,242,222,143,144,158,267,230,121,157,91,	0,631,3676,7322,10095,15469,17354,19571,23204,24732,26894,29322,30567,
#Partially deleted in new
chr11	3676016	3679768	chr11:3676016-3679768	0	-	3676016	3676016	8553170	3	360,112,215,	0,492,3537,
#Deleted in new
chr11	3676268	3676710	chr11:3676268-3676710	0	-	3676268	3676268	8553170	2	108,202,	0,240,
#Partially deleted in new
chr11	3679637	3695558	chr11:3679637-3695558	0	-	3683271	3695558	789624	6	71,242,131,143,144,110,	0,3562,6426,11709,13594,15811,
#Partially deleted in new
chr11	3693056	3695565	chr11:3693056-3695565	0	-	3693056	3693056	8553170	2	319,117,	0,2392,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	3695470	3697260	chr11:3695470-3697260	0	-	3695470	3695470	8553170	2	136,576,	0,1214,
#Partially deleted in new
chr11	3695518	3702651	chr11:3695518-3702651	0	-	3699311	3702651	789624	3	88,267,189,	0,3563,6944,
#Partially deleted in new
chr11	3699008	3700814	chr11:3699008-3700814	0	-	3699008	3699008	8553170	2	340,205,	0,1601,
#Partially deleted in new
chr11	3711552	3797541	chr11:3711552-3797541	1	-	3712542	3782117	0	20	1176,178,139,114,299,117,188,134,141,93,88,138,164,181,108,140,177,102,104,142,	0,2265,7859,9159,11604,13550,19838,23638,32956,41763,48986,51349,57028,60195,62079,64329,67320,67603,70489,85847,
#Partially deleted in new
chr11	3711834	3797547	chr11:3711834-3797547	1	-	3712542	3782117	0	20	894,178,139,114,299,117,188,134,141,93,139,138,164,181,108,140,177,102,104,148,	0,1983,7577,8877,11322,13268,19556,23356,32674,41481,48653,51067,56746,59913,61797,64047,67038,67321,70207,85565,
#Deleted in new
chr11	3714771	3714875	chr11:3714771-3714875	3	-	3714771	3714771	8553170	1	104,	0,
#Partially deleted in new
chr11	3719487	3721039	chr11:3719487-3721039	0	-	3719487	3719487	8553170	2	63,328,	0,1224,
#Partially deleted in new
chr11	3725102	3760594	chr11:3725102-3760594	0	-	3725102	3760594	789624	6	117,188,134,141,93,32,	0,6288,10088,19406,28213,35460,
#Partially deleted in new
chr11	3731389	3762933	chr11:3731389-3762933	0	-	3731389	3762933	789624	5	189,134,93,88,32,	0,3801,21926,29149,31512,
#Partially deleted in new
chr11	3731482	3768680	chr11:3731482-3768680	0	-	3760455	3768680	789624	7	94,134,141,93,239,138,100,	0,3708,13026,21833,28905,31419,37098,
#Partially deleted in new
chr11	3760140	3762960	chr11:3760140-3762960	0	-	3760140	3760140	8553170	2	486,59,	0,2761,
#Partially deleted in new
chr11	3775893	3797552	chr11:3775893-3797552	0	-	3775893	3782117	789624	5	128,66,102,104,153,	0,3090,3262,6148,21506,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	3781394	3781456	chr11:3781394-3781456	3	+	3781394	3781394	8553170	1	62,	0,
#Partially deleted in new
chr11	3797723	3826371	chr11:3797723-3826371	0	+	3811259	3822914	789624	8	20,22,175,85,253,107,109,1044,	0,10570,13526,25185,26159,26546,27296,27604,
#Partially deleted in new
chr11	3797818	3826352	chr11:3797818-3826352	1	+	3797843	3825458	789624	7	164,22,175,253,95,109,1025,	0,10475,13431,26064,26451,27201,27509,
#Partially deleted in new
chr11	3797818	3826334	chr11:3797818-3826334	1	+	3797843	3825458	789624	7	164,22,175,253,107,109,1007,	0,10475,13431,26064,26451,27201,27509,
#Partially deleted in new
chr11	3797897	3824056	chr11:3797897-3824056	0	+	3797897	3797897	8553170	5	85,22,175,104,174,	0,10396,13352,19534,25985,
#Partially deleted in new
chr11	3797901	3826321	chr11:3797901-3826321	1	+	3824319	3825458	789624	6	81,22,253,107,109,994,	0,10392,25981,26368,27118,27426,
#Partially deleted in new
chr11	3797907	3824747	chr11:3797907-3824747	0	+	3797907	3797907	8553170	3	75,22,865,	0,10386,25975,
#Partially deleted in new
chr11	3797911	3826317	chr11:3797911-3826317	0	+	3811259	3824350	789624	6	71,22,175,107,109,990,	0,10382,13338,26358,27108,27416,
#Partially deleted in new
chr11	3797912	3826334	chr11:3797912-3826334	1	+	3823652	3825120	789624	7	70,22,128,253,107,109,1007,	0,10381,25700,25970,26357,27107,27415,
#Partially deleted in new
chr11	3797922	3824554	chr11:3797922-3824554	1	+	3811259	3824478	789624	5	60,22,175,253,285,	0,10371,13327,25960,26347,
#Partially deleted in new
chr11	3797923	3825652	chr11:3797923-3825652	1	+	3824319	3825458	789624	6	59,22,253,95,109,325,	0,10370,25959,26346,27096,27404,
#Partially deleted in new
chr11	3797924	3825354	chr11:3797924-3825354	1	+	3811259	3825120	789624	7	58,22,175,253,186,109,27,	0,10369,13325,25958,26345,27095,27403,
#Partially deleted in new
chr11	3797924	3825509	chr11:3797924-3825509	1	+	3824319	3825120	789624	6	58,22,253,186,109,182,	0,10369,25958,26345,27095,27403,
#Partially deleted in new
chr11	3797925	3825680	chr11:3797925-3825680	3	+	3811259	3825458	789624	8	57,22,175,183,253,107,109,353,	0,10368,13324,19427,25957,26344,27094,27402,
#Partially deleted in new
chr11	3797938	3823915	chr11:3797938-3823915	0	+	3811259	3822914	789624	6	44,22,175,85,124,33,	0,10355,13311,24970,25678,25944,
#Partially deleted in new
chr11	3797940	3824862	chr11:3797940-3824862	0	+	3797940	3797940	8553170	4	42,22,175,593,	0,10353,13309,26329,
#Partially deleted in new
chr11	3797946	3825635	chr11:3797946-3825635	0	+	3811259	3824350	789624	6	36,22,175,95,109,308,	0,10347,13303,26323,27073,27381,
#Partially deleted in new
chr11	3797958	3824343	chr11:3797958-3824343	0	+	3811259	3822914	789624	7	142,22,175,85,128,253,74,	0,10335,13291,24950,25654,25924,26311,
#Partially deleted in new
chr11	3797971	3825777	chr11:3797971-3825777	1	+	3824319	3825458	789624	5	11,22,107,109,450,	0,10322,26298,27048,27356,
#Partially deleted in new
chr11	3797988	3825753	chr11:3797988-3825753	0	+	3811259	3822914	789624	8	112,22,175,85,253,107,333,426,	0,10305,13261,24920,25894,26281,26807,27339,
#Partially deleted in new
chr11	3808009	3825645	chr11:3808009-3825645	1	+	3822946	3825120	789624	8	78,22,85,128,253,107,109,318,	0,284,14899,15603,15873,16260,17010,17318,
#Partially deleted in new
chr11	3808041	3826314	chr11:3808041-3826314	1	+	3811259	3825120	789624	7	46,22,175,253,180,109,987,	0,252,3208,15841,16228,16978,17286,
#Partially deleted in new
chr11	3808055	3824441	chr11:3808055-3824441	0	+	3808055	3808055	8553170	4	32,22,175,559,	0,238,3194,15827,
#Partially deleted in new
chr11	3808174	3824204	chr11:3808174-3824204	0	+	3808174	3808174	8553170	2	141,322,	0,15708,
#Partially deleted in new
chr11	3808289	3826370	chr11:3808289-3826370	1	+	3811290	3825458	789624	7	26,175,85,253,107,109,1043,	0,2960,14619,15593,15980,16730,17038,
#Partially deleted in new
chr11	3808460	3826371	chr11:3808460-3826371	1	+	3811259	3825458	789624	7	191,175,183,253,107,109,1044,	0,2789,8892,15422,15809,16559,16867,
#Partially deleted in new
chr11	3808540	3825068	chr11:3808540-3825068	0	+	3808540	3808540	8553170	3	111,494,49,	0,15342,16479,
#Partially deleted in new
chr11	3808558	3825036	chr11:3808558-3825036	0	+	3808558	3808558	8553170	5	93,175,253,95,301,	0,2691,15324,15711,16177,
#Partially deleted in new
chr11	3808564	3824305	chr11:3808564-3824305	0	+	3808564	3808564	8553170	4	87,175,128,423,	0,2685,15048,15318,
#Partially deleted in new
chr11	3808575	3824732	chr11:3808575-3824732	0	+	3808575	3808575	8553170	3	76,253,463,	0,15307,15694,
#Partially deleted in new
chr11	3808578	3825541	chr11:3808578-3825541	1	+	3811259	3825458	789624	6	73,175,253,107,109,214,	0,2671,15304,15691,16441,16749,
#Partially deleted in new
chr11	3808593	3825578	chr11:3808593-3825578	1	+	3824319	3825458	789624	6	58,128,253,95,109,251,	0,15019,15289,15676,16426,16734,
#Partially deleted in new
chr11	3808593	3826330	chr11:3808593-3826330	1	+	3824319	3825458	789624	5	58,253,107,109,1003,	0,15289,15676,16426,16734,
#Partially deleted in new
chr11	3808598	3825440	chr11:3808598-3825440	0	+	3811259	3825440	789624	6	53,175,253,95,109,113,	0,2651,15284,15671,16421,16729,
#Partially deleted in new
chr11	3811266	3824357	chr11:3811266-3824357	0	+	3811266	3811266	8553170	4	158,85,128,475,	0,11642,12346,12616,
#Partially deleted in new
chr11	3816188	3824172	chr11:3816188-3824172	0	+	3816188	3816188	8553170	3	66,183,290,	0,1164,7694,
#Deleted in new
chr11	3823619	3824320	chr11:3823619-3824320	0	+	3823619	3823619	8553170	2	516,51,	0,650,
#Deleted in new
chr11	3824570	3825875	chr11:3824570-3825875	0	+	3824570	3824570	8553170	2	558,548,	0,757,
#Partially deleted in new
chr11	3826977	3840983	chr11:3826977-3840983	3	-	3827562	3828138	789624	2	1229,90,	0,13916,
#Partially deleted in new
chr11	3826981	3837867	chr11:3826981-3837867	1	-	3827562	3828138	789624	2	1225,64,	0,10822,
#Partially deleted in new
chr11	3827415	3840842	chr11:3827415-3840842	1	-	3827562	3828138	789624	2	791,275,	0,13152,
#Deleted in new
chr11	3854317	3855509	chr11:3854317-3855509	3	-	3854317	3854317	8553170	2	341,153,	0,1039,
#Partially deleted in new
chr11	3854526	4059337	chr11:3854526-4059337	0	+	3967634	4059337	789624	5	210,131,115,112,57,	0,113025,169346,200999,204754,
#Deleted in new
chr11	3854611	3855399	chr11:3854611-3855399	3	+	3854611	3854611	8553170	2	43,484,	0,304,
#Partially deleted in new
chr11	3855701	4093209	chr11:3855701-4093209	3	+	3856270	4091798	0	12	708,131,115,112,116,178,178,168,101,236,67,1928,	0,111850,168171,199824,203579,214324,218800,226482,227180,227561,230775,235580,
#Partially deleted in new
chr11	3855702	4093210	chr11:3855702-4093210	1	+	3856270	4091798	789624	12	707,131,115,112,116,178,178,168,101,236,385,1929,	0,111849,168170,199823,203578,214323,218799,226481,227179,227560,230774,235579,
#Deleted in new
chr11	3856061	3856141	chr11:3856061-3856141	3	+	3856061	3856061	5263520	1	80,	0,
#Partially deleted in new
chr11	3856181	4091798	chr11:3856181-4091798	1	+	3856270	4091326	0	13	228,131,115,112,116,178,178,168,101,236,67,37,517,	0,111370,167691,199344,203099,213844,218320,226002,226700,227081,230295,232520,235100,
#Partially deleted in new
chr11	3867102	4059403	chr11:3867102-4059403	0	+	3967634	4059403	789624	5	43,131,115,112,123,	0,100449,156770,188423,192178,
#Partially deleted in new
chr11	3867306	4070052	chr11:3867306-4070052	0	+	3967634	4070052	789624	6	79,131,115,112,116,27,	0,100245,156566,188219,191974,202719,
#Partially deleted in new
chr11	3868047	4055604	chr11:3868047-4055604	0	+	3967634	4055604	789624	4	227,131,115,79,	0,99504,155825,187478,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	3888086	4023987	chr11:3888086-4023987	0	+	3967634	4023987	789624	4	69,100,131,115,	0,33725,79465,135786,
#Partially deleted in new
chr11	3892397	3892887	chr11:3892397-3892887	7	-	3892397	3892397	16724991	1	490,	0,
#Partially deleted in new
chr11	3903462	4055610	chr11:3903462-4055610	0	+	3967634	4055610	789624	5	147,105,131,115,85,	0,44100,64089,120410,152063,
#Partially deleted in new
chr11	3903462	4059356	chr11:3903462-4059356	0	+	3967634	4059356	789624	5	147,131,115,112,76,	0,64089,120410,152063,155818,
#Deleted in new
chr11	3922566	3922703	chr11:3922566-3922703	3	+	3922566	3922566	8553170	1	137,	0,
#Partially deleted in new
chr11	3947342	4055565	chr11:3947342-4055565	0	+	3967634	4055565	789624	4	382,131,115,40,	0,20209,76530,108183,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	3961276	3961538	chr11:3961276-3961538	7	+	3961276	3961276	16724991	1	262,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	3972880	3974237	chr11:3972880-3974237	7	-	3972880	3972880	16724991	2	523,325,	0,1032,
#Partially deleted in new
chr11	3989161	4070064	chr11:3989161-4070064	0	+	3989161	3989161	8553170	5	75,115,112,116,39,	0,34711,66364,70119,80864,
#Deleted in new
chr11	3989162	3989463	chr11:3989162-3989463	7	-	3989162	3989162	16724991	1	301,	0,
#Deleted in new
chr11	4018947	4019118	chr11:4018947-4019118	7	+	4018947	4018947	16724991	1	171,	0,
#Partially deleted in new
chr11	4055522	4082221	chr11:4055522-4082221	0	+	4055522	4055522	8553170	4	115,116,178,38,	0,3758,14503,26661,
#Partially deleted in new
chr11	4058748	4092126	chr11:4058748-4092126	1	+	4059302	4091798	789624	9	191,116,178,178,168,101,236,67,845,	0,532,11277,15753,23435,24133,24514,27728,32533,
#Partially deleted in new
chr11	4074518	4091669	chr11:4074518-4091669	0	+	4074518	4091669	789624	7	161,168,101,236,93,67,388,	0,7665,8363,8744,10154,11958,16763,
#Partially deleted in new
chr11	4082204	4083654	chr11:4082204-4083654	0	+	4082204	4082204	8553170	3	147,101,392,	0,677,1058,
#Partially deleted in new
chr11	4083156	4091433	chr11:4083156-4091433	0	+	4083156	4083156	8553170	3	342,67,152,	0,3320,8125,
#Partially deleted in new
chr11	4086204	4091966	chr11:4086204-4091966	0	+	4086204	4086204	8553170	2	339,685,	0,5077,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	4088572	4089085	chr11:4088572-4089085	0	+	4088572	4088572	8553170	2	230,202,	0,311,
#Partially deleted in new
chr11	4094706	4107480	chr11:4094706-4107480	0	+	4094706	4094706	8553170	3	325,178,46,	0,11339,12728,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr11	4094798	4138870	chr11:4094798-4138870	0	+	4095012	4106061	789624	20	233,89,86,178,101,60,40,163,142,84,162,80,202,150,222,77,136,96,189,676,	0,7194,10807,11247,12636,14845,16802,17101,23521,25046,26805,27342,28384,31885,32236,34275,37487,38764,40283,43396,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	4094804	4106147	chr11:4094804-4106147	0	+	4094804	4094804	8553170	4	227,144,89,102,	0,4520,7188,11241,
#Partially deleted in new
chr11	4094808	4138876	chr11:4094808-4138876	3	+	4095012	4138383	0	19	223,89,178,101,60,40,163,142,84,162,80,202,150,222,77,136,96,189,682,	0,7184,11237,12626,14835,16792,17091,23511,25036,26795,27332,28374,31875,32226,34265,37477,38754,40273,43386,
#Partially deleted in new
chr11	4094842	4138875	chr11:4094842-4138875	0	+	4095012	4107440	789624	18	189,89,101,60,40,163,142,84,162,80,202,150,222,77,136,96,189,681,	0,7150,12592,14801,16758,17057,23477,25002,26761,27298,28340,31841,32192,34231,37443,38720,40239,43352,
#Partially deleted in new
chr11	4094851	4107570	chr11:4094851-4107570	0	+	4094851	4094851	8553170	4	180,89,178,136,	0,7141,11194,12583,
#Partially deleted in new
chr11	4101927	4106223	chr11:4101927-4106223	0	+	4101927	4101927	8553170	2	154,178,	0,4118,
#Partially deleted in new
chr11	4111974	4123384	chr11:4111974-4123384	0	+	4111974	4121656	789624	6	88,142,84,187,80,202,	0,6345,7870,9604,10166,11208,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	4116077	4138446	chr11:4116077-4138446	1	+	4118335	4138383	789624	13	283,142,84,162,80,202,150,222,77,136,96,189,252,	0,2242,3767,5526,6063,7105,10606,10957,12996,16208,17485,19004,22117,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	4116242	4138875	chr11:4116242-4138875	0	+	4118335	4119946	789624	13	118,142,126,162,80,202,150,222,77,136,96,189,681,	0,2077,3602,5361,5898,6940,10441,10792,12831,16043,17320,18839,21952,
#Partially deleted in new
chr11	4119061	4123270	chr11:4119061-4123270	0	+	4119061	4119061	8553170	6	81,19,84,162,80,88,	0,644,783,2542,3079,4121,
#Partially deleted in new
chr11	4119068	4123271	chr11:4119068-4123271	0	+	4119068	4119068	8553170	6	145,19,84,162,80,89,	0,637,776,2535,3072,4114,
#Partially deleted in new
chr11	4121674	4126949	chr11:4121674-4126949	0	+	4121674	4121674	8553170	4	91,80,202,266,	0,466,1508,5009,
#Partially deleted in new
chr11	4122108	4126817	chr11:4122108-4126817	0	+	4122108	4122108	8553170	3	112,202,134,	0,1074,4575,
#Partially deleted in new
chr11	4146111	4151104	chr11:4146111-4151104	5	-	4146111	4146111	16724991	2	1226,50,	0,4943,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	4146111	4151104	chr11:4146111-4151104	7	-	4146111	4146111	16724991	2	2552,50,	0,4943,
#Partially deleted in new
chr11	4146281	4147295	chr11:4146281-4147295	5	-	4146281	4146281	16724991	1	1014,	0,
#Partially deleted in new
chr11	4187139	4202655	chr11:4187139-4202655	3	+	4187139	4187139	789624	2	65,397,	0,15119,
#Deleted in new
chr11	4210353	4212091	chr11:4210353-4212091	7	-	4210353	4210353	16724991	1	1738,	0,
#Deleted in new
chr11	4233287	4233872	chr11:4233287-4233872	3	+	4233287	4233872	789624	1	585,	0,
#Deleted in new
chr11	4242055	4242640	chr11:4242055-4242640	3	-	4242055	4242640	789624	1	585,	0,
#Deleted in new
chr11	4278704	4279192	chr11:4278704-4279192	7	+	4278704	4278704	16724991	1	488,	0,
#Deleted in new
chr11	4287498	4288083	chr11:4287498-4288083	3	-	4287498	4288083	789624	1	585,	0,
#Deleted in new
chr11	4329864	4330449	chr11:4329864-4330449	3	+	4329864	4330449	789624	1	585,	0,
#Deleted in new
chr11	4338659	4339244	chr11:4338659-4339244	3	-	4338659	4339244	789624	1	585,	0,
#Deleted in new
chr11	4367262	4368386	chr11:4367262-4368386	3	-	4367350	4368295	789624	1	1124,	0,
#Deleted in new
chr11	4378281	4379209	chr11:4378281-4379209	7	+	4378281	4378281	16724991	1	928,	0,
#Deleted in new
chr11	4384896	4386188	chr11:4384896-4386188	0	-	4385331	4386188	789624	3	498,176,32,	0,781,1260,
#Partially deleted in new
chr11	4384901	4393696	chr11:4384901-4393696	3	-	4385284	4390409	0	7	952,101,23,231,96,457,64,	0,1255,2066,3398,4752,5100,8731,
#Partially deleted in new
chr11	4393782	4476361	chr11:4393782-4476361	7	+	4393782	4393782	16724991	3	383,177,1600,	0,75584,80979,
#Partially deleted in new
chr11	4418059	4419011	chr11:4418059-4419011	7	+	4418059	4418059	16724991	1	952,	0,
#Partially deleted in new
chr11	4431322	4432277	chr11:4431322-4432277	7	-	4431322	4431322	16724991	1	955,	0,
#Deleted in new
chr11	4449294	4450361	chr11:4449294-4450361	3	+	4449339	4450284	789624	1	1067,	0,
#Deleted in new
chr11	4474812	4475755	chr11:4474812-4475755	5	+	4474812	4474812	16724991	1	943,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	4482645	4493497	chr11:4482645-4493497	3	+	4488900	4489845	789624	2	531,4925,	0,5927,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	4482645	4493497	chr11:4482645-4493497	1	+	4483163	4489845	789624	2	531,4545,	0,6307,
#Deleted in new
chr11	4488878	4489908	chr11:4488878-4489908	1	+	4488900	4489845	789624	1	1030,	0,
#Deleted in new
chr11	4514965	4515924	chr11:4514965-4515924	7	-	4514965	4514965	16724991	1	959,	0,
#Deleted in new
chr11	4545190	4546144	chr11:4545190-4546144	3	+	4545190	4546144	789624	1	954,	0,
#Partially deleted in new
chr11	4581742	4593340	chr11:4581742-4593340	3	+	4586890	4587865	789624	2	122,6469,	0,5129,
#Partially deleted in new
chr11	4586790	4587905	chr11:4586790-4587905	1	+	4586812	4587865	789624	1	1115,	0,
#Partially deleted in new
chr11	4586790	4587905	chr11:4586790-4587905	1	+	4586890	4587865	789624	1	1115,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	4593613	4596574	chr11:4593613-4596574	3	+	4594038	4595013	789624	1	2961,	0,
#Partially deleted in new
chr11	4593749	4595013	chr11:4593749-4595013	1	+	4593749	4595013	789624	3	10,8,1032,	0,140,232,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	4598671	4608259	chr11:4598671-4608259	3	-	4600275	4605504	789624	7	2155,101,23,261,96,483,233,	0,2355,2992,3480,4573,6407,9355,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	4598779	4608204	chr11:4598779-4608204	0	-	4602368	4605504	789624	7	2047,101,23,255,100,483,178,	0,2247,2884,3372,4461,6299,9247,
#Partially deleted in new
chr11	4600638	4608231	chr11:4600638-4608231	0	-	4600638	4602265	789624	6	188,101,23,261,96,205,	0,388,1025,1513,2606,7388,
#Partially deleted in new
chr11	4600799	4601565	chr11:4600799-4601565	0	-	4600799	4600799	8553170	2	27,539,	0,227,
#Partially deleted in new
chr11	4601640	4608176	chr11:4601640-4608176	0	-	4601640	4601640	8553170	4	46,261,96,150,	0,511,1604,6386,
#Partially deleted in new
chr11	4601671	4608168	chr11:4601671-4608168	0	-	4601671	4601671	8553170	4	741,96,483,142,	0,1573,3407,6355,
#Partially deleted in new
chr11	4602243	4608138	chr11:4602243-4608138	0	-	4602243	4605504	789624	3	169,483,112,	0,2835,5783,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	4637476	4643060	chr11:4637476-4643060	3	+	4639790	4640765	789624	2	277,3284,	0,2300,
#Deleted in new
chr11	4639714	4640838	chr11:4639714-4640838	1	+	4639790	4640765	789624	1	1124,	0,
#Partially deleted in new
chr11	4643419	4655488	chr11:4643419-4655488	3	+	4652526	4653483	789624	2	611,3001,	0,9068,
#Partially deleted in new
chr11	4643419	4655488	chr11:4643419-4655488	1	+	4652526	4653415	789624	3	611,169,2162,	0,9068,9907,
#Deleted in new
chr11	4660852	4661763	chr11:4660852-4661763	7	-	4660852	4660852	16724991	1	911,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	4680170	4697842	chr11:4680170-4697842	3	-	4681748	4682711	789624	2	2591,190,	0,17482,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	4680170	4685092	chr11:4680170-4685092	1	-	4681748	4682711	789624	2	2591,35,	0,4887,
#Partially deleted in new
chr11	4682460	4697854	chr11:4682460-4697854	0	-	4682460	4682711	789624	3	301,79,202,	0,3317,15192,
#Partially deleted in new
chr11	4690422	4697831	chr11:4690422-4697831	3	-	4690757	4697661	8553170	2	1265,179,	0,7230,
#Partially deleted in new
chr11	4704926	4989830	chr11:4704926-4989830	0	+	4704926	4704926	8553170	4	119,72,41,183,	0,62343,283343,284721,
#Deleted in new
chr11	4709568	4710510	chr11:4709568-4710510	5	+	4709568	4709568	16724991	1	942,	0,
#Deleted in new
chr11	4709568	4712421	chr11:4709568-4712421	7	+	4709568	4709568	16724991	1	2853,	0,
#Deleted in new
chr11	4718611	4719559	chr11:4718611-4719559	7	+	4718611	4718611	16724991	1	948,	0,
#Deleted in new
chr11	4722739	4724171	chr11:4722739-4724171	7	-	4722739	4722739	16724991	1	1432,	0,
#Deleted in new
chr11	4736177	4737078	chr11:4736177-4737078	7	-	4736177	4736177	16724991	1	901,	0,
#Deleted in new
chr11	4752045	4752944	chr11:4752045-4752944	7	-	4752045	4752045	16724991	1	899,	0,
#Deleted in new
chr11	4756644	4756797	chr11:4756644-4756797	3	+	4756644	4756644	8553170	1	153,	0,
#Partially deleted in new
chr11	4767269	4992429	chr11:4767269-4992429	3	+	4988211	4992242	789624	7	72,243,221,149,126,162,216,	0,220798,222378,223328,224101,224694,224944,
#Deleted in new
chr11	4768978	4769938	chr11:4768978-4769938	3	-	4768978	4769938	789624	1	960,	0,
#Deleted in new
chr11	4768978	4769917	chr11:4768978-4769917	1	-	4768978	4769917	789624	1	939,	0,
#Deleted in new
chr11	4786753	4787705	chr11:4786753-4787705	7	+	4786753	4786753	16724991	1	952,	0,
#Partially deleted in new
chr11	4793777	4795284	chr11:4793777-4795284	7	-	4793777	4793777	16724991	2	459,369,	0,1138,
#Deleted in new
chr11	4803432	4804380	chr11:4803432-4804380	3	-	4803432	4804380	789624	1	948,	0,
#Deleted in new
chr11	4821320	4822456	chr11:4821320-4822456	3	+	4821385	4822414	789624	1	1136,	0,
#Deleted in new
chr11	4821421	4822414	chr11:4821421-4822414	1	+	4821421	4822414	789624	1	993,	0,
#Deleted in new
chr11	4830174	4833072	chr11:4830174-4833072	7	+	4830174	4830174	16724991	2	64,974,	0,1924,
#Deleted in new
chr11	4832132	4833072	chr11:4832132-4833072	5	+	4832132	4832132	16724991	1	940,	0,
#Deleted in new
chr11	4847488	4849238	chr11:4847488-4849238	3	-	4848236	4849208	789624	1	1750,	0,
#Deleted in new
chr11	4859609	4860564	chr11:4859609-4860564	5	-	4859609	4859609	16724991	1	955,	0,
#Partially deleted in new
chr11	4859616	4863652	chr11:4859616-4863652	7	-	4859616	4859616	16724991	2	999,39,	0,3997,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	4871716	4878117	chr11:4871716-4878117	7	+	4871716	4871716	16724991	2	127,2919,	0,3482,
#Deleted in new
chr11	4876556	4877462	chr11:4876556-4877462	5	+	4876556	4876556	16724991	1	906,	0,
#Deleted in new
chr11	4881818	4882883	chr11:4881818-4882883	3	+	4881818	4882883	789624	1	1065,	0,
#Deleted in new
chr11	4881899	4882883	chr11:4881899-4882883	1	+	4881899	4882883	789624	1	984,	0,
#Deleted in new
chr11	4889592	4890596	chr11:4889592-4890596	7	-	4889592	4889592	16724991	1	1004,	0,
#Partially deleted in new
chr11	4903782	4909462	chr11:4903782-4909462	3	+	4907369	4908308	789624	2	62,2124,	0,3556,
#Deleted in new
chr11	4907332	4908380	chr11:4907332-4908380	1	+	4907369	4908308	789624	1	1048,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	4912587	4919350	chr11:4912587-4919350	3	-	4914718	4915663	789624	2	3152,174,	0,6589,
#Deleted in new
chr11	4914669	4915692	chr11:4914669-4915692	1	-	4914718	4915663	789624	1	1023,	0,
#Deleted in new
chr11	4923373	4924339	chr11:4923373-4924339	3	-	4923373	4924339	789624	1	966,	0,
#Deleted in new
chr11	4937370	4938294	chr11:4937370-4938294	7	-	4937370	4937370	16724991	1	924,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	4942830	4947605	chr11:4942830-4947605	3	-	4946158	4947100	789624	2	4332,61,	0,4714,
#Deleted in new
chr11	4946124	4947126	chr11:4946124-4947126	1	-	4946158	4947100	789624	1	1002,	0,
#Deleted in new
chr11	4954771	4955713	chr11:4954771-4955713	3	-	4954771	4955713	789624	1	942,	0,
#Deleted in new
chr11	4972942	4973884	chr11:4972942-4973884	7	-	4972942	4972942	16724991	1	942,	0,
#Partially deleted in new
chr11	4988193	4992427	chr11:4988193-4992427	1	+	4988211	4992242	789624	6	117,221,149,126,162,214,	0,1454,2404,3177,3770,4020,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	4994850	5005536	chr11:4994850-5005536	0	+	4994850	4994850	8553170	4	485,102,1230,307,	0,2631,7720,10379,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	4994850	5005536	chr11:4994850-5005536	3	+	4998982	4999930	789624	3	485,102,6713,	0,2631,3973,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	4994850	5005536	chr11:4994850-5005536	0	+	4994850	4994850	8553170	3	485,102,2966,	0,2631,7720,
#Deleted in new
chr11	4998982	4999930	chr11:4998982-4999930	1	+	4998982	4999930	789624	1	948,	0,
#Deleted in new
chr11	5015137	5016079	chr11:5015137-5016079	7	+	5015137	5015137	16724991	1	942,	0,
#Deleted in new
chr11	5037012	5037951	chr11:5037012-5037951	7	+	5037012	5037012	16724991	1	939,	0,
#Deleted in new
chr11	5046525	5047461	chr11:5046525-5047461	3	+	5046525	5047461	789624	1	936,	0,
#Deleted in new
chr11	5058649	5059627	chr11:5058649-5059627	3	-	5058649	5059627	789624	1	978,	0,
#Deleted in new
chr11	5069571	5070497	chr11:5069571-5070497	3	+	5069571	5070497	8553170	1	926,	0,
#Deleted in new
chr11	5076129	5077066	chr11:5076129-5077066	7	-	5076129	5076129	16724991	1	937,	0,
#Deleted in new
chr11	5092675	5093611	chr11:5092675-5093611	7	+	5092675	5092675	16724991	1	936,	0,
#Deleted in new
chr11	5104152	5105084	chr11:5104152-5105084	7	+	5104152	5104152	16724991	1	932,	0,
#Deleted in new
chr11	5120620	5121578	chr11:5120620-5121578	5	-	5120620	5120620	16724991	1	958,	0,
#Partially deleted in new
chr11	5121154	5124513	chr11:5121154-5124513	5	-	5121154	5121154	16724991	2	753,46,	0,3313,
#Partially deleted in new
chr11	5128775	5138356	chr11:5128775-5138356	3	-	5131691	5132642	789624	2	3927,46,	0,9535,
#Partially deleted in new
chr11	5128775	5138251	chr11:5128775-5138251	1	-	5131691	5132642	789624	2	3927,66,	0,9410,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	5143218	5154757	chr11:5143218-5154757	3	-	5151430	5152369	789624	2	9472,311,	0,11228,
#Deleted in new
chr11	5151430	5152369	chr11:5151430-5152369	1	-	5151430	5152369	789624	1	939,	0,
#Deleted in new
chr11	5170350	5171296	chr11:5170350-5171296	7	-	5170350	5170350	16724991	1	946,	0,
#Deleted in new
chr11	5177713	5178664	chr11:5177713-5178664	7	-	5177713	5177713	16724991	1	951,	0,
#Deleted in new
chr11	5199734	5200700	chr11:5199734-5200700	3	-	5199734	5200700	789624	1	966,	0,
#Deleted in new
chr11	5199734	5200682	chr11:5199734-5200682	1	-	5199734	5200682	789624	1	948,	0,
#Deleted in new
chr11	5205040	5207308	chr11:5205040-5207308	3	+	5205040	5205040	8553170	2	47,475,	0,1793,
#Deleted in new
chr11	5224308	5225461	chr11:5224308-5225461	3	-	5224308	5224308	8553170	1	1153,	0,
#Deleted in new
chr11	5224447	5224639	chr11:5224447-5224639	3	-	5224447	5224447	8553170	1	192,	0,
#Deleted in new
chr11	5225463	5227071	chr11:5225463-5227071	1	-	5225597	5227021	0	3	263,223,142,	0,1113,1466,
#Deleted in new
chr11	5225463	5227197	chr11:5225463-5227197	3	-	5225597	5227021	0	3	263,223,268,	0,1113,1466,
#Deleted in new
chr11	5225466	5227071	chr11:5225466-5227071	0	-	5226707	5227021	789624	3	260,223,126,	0,1110,1479,
#Deleted in new
chr11	5225654	5226823	chr11:5225654-5226823	0	-	5225654	5225654	8553170	2	72,247,	0,922,
#Deleted in new
chr11	5226262	5227072	chr11:5226262-5227072	1	-	5226555	5227021	789624	2	537,143,	0,667,
#Deleted in new
chr11	5226619	5229395	chr11:5226619-5229395	0	-	5226619	5227021	789624	4	180,110,68,144,	0,310,892,2632,
#Deleted in new
chr11	5232677	5234483	chr11:5232677-5234483	1	-	5232687	5234433	789624	3	121,223,142,	0,1313,1664,
#Deleted in new
chr11	5232837	5234648	chr11:5232837-5234648	1	-	5232963	5234433	0	3	255,223,307,	0,1153,1504,
#Partially deleted in new
chr11	5232837	5243657	chr11:5232837-5243657	3	-	5232963	5234433	0	4	255,223,120,208,	0,1153,1504,10612,
#Deleted in new
chr11	5232837	5234483	chr11:5232837-5234483	1	-	5232963	5234433	789624	3	255,223,142,	0,1153,1504,
#Deleted in new
chr11	5232929	5234483	chr11:5232929-5234483	0	-	5232929	5234433	789624	2	163,142,	0,1412,
#Deleted in new
chr11	5233992	5235370	chr11:5233992-5235370	0	-	5233992	5234433	789624	3	221,189,156,	0,349,1222,
#Deleted in new
chr11	5241104	5243533	chr11:5241104-5243533	7	-	5241104	5241104	16724991	3	1143,223,84,	0,2001,2345,
#Deleted in new
chr11	5242119	5243537	chr11:5242119-5243537	5	-	5242119	5242119	16724991	3	128,223,88,	0,986,1330,
#Deleted in new
chr11	5244553	5245546	chr11:5244553-5245546	3	-	5244553	5244553	789624	1	993,	0,
#Deleted in new
chr11	5248078	5249859	chr11:5248078-5249859	3	-	5248358	5249804	0	3	409,223,147,	0,1289,1634,
#Partially deleted in new
chr11	5248269	5254783	chr11:5248269-5254783	3	-	5248358	5254728	8553170	3	218,223,147,	0,6022,6367,
#Partially deleted in new
chr11	5248269	5254783	chr11:5248269-5254783	1	-	5248358	5254728	789624	4	218,63,223,147,	0,5073,6022,6367,
#Deleted in new
chr11	5248269	5249855	chr11:5248269-5249855	0	-	5248269	5248269	8553170	2	1321,143,	0,1443,
#Deleted in new
chr11	5248427	5249836	chr11:5248427-5249836	1	-	5249551	5249804	789624	3	60,223,86,	0,940,1323,
#Deleted in new
chr11	5253189	5254811	chr11:5253189-5254811	3	-	5253276	5254728	0	3	216,223,175,	0,1102,1447,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	5253189	5505605	chr11:5253189-5505605	1	-	5253276	5254441	789624	3	216,223,255,	0,1102,252161,
#Deleted in new
chr11	5253388	5254741	chr11:5253388-5254741	1	-	5254475	5254728	789624	3	17,223,67,	0,903,1286,
#Partially deleted in new
chr11	5254879	5328413	chr11:5254879-5328413	0	-	5254879	5254879	8553170	5	286,116,66,39,58,	0,3129,3831,4619,73476,
#Partially deleted in new
chr11	5254897	5345861	chr11:5254897-5345861	0	-	5254897	5254897	8553170	7	268,116,66,228,195,358,89,	0,3111,3813,13472,14556,14901,90875,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	5268344	5505652	chr11:5268344-5505652	3	-	5268468	5269890	0	4	253,223,358,84,	0,1109,1454,237224,
#Deleted in new
chr11	5268351	5269945	chr11:5268351-5269945	1	-	5268468	5269890	0	3	246,223,147,	0,1102,1447,
#Deleted in new
chr11	5291760	5292380	chr11:5291760-5292380	7	-	5291760	5291760	16724991	1	620,	0,
#Deleted in new
chr11	5301013	5301946	chr11:5301013-5301946	3	-	5301013	5301946	789624	1	933,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	5303443	5505613	chr11:5303443-5505613	0	-	5303443	5303443	8553170	5	1034,127,92,35,45,	0,42329,42818,43432,202125,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	5305166	5505613	chr11:5305166-5505613	0	-	5305166	5305166	8553170	5	511,127,92,35,45,	0,40606,41095,41709,200402,
#Deleted in new
chr11	5314771	5315684	chr11:5314771-5315684	7	-	5314771	5314771	16724991	1	913,	0,
#Deleted in new
chr11	5323358	5324297	chr11:5323358-5324297	3	-	5323358	5324297	789624	1	939,	0,
#Deleted in new
chr11	5330591	5331360	chr11:5330591-5331360	7	-	5330591	5330591	16724991	1	769,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	5340324	5505652	chr11:5340324-5505652	0	-	5340324	5340324	789624	5	1038,127,92,35,84,	0,5448,5937,6551,165244,
#Deleted in new
chr11	5342585	5343524	chr11:5342585-5343524	3	-	5342585	5343524	789624	1	939,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	5342941	5505652	chr11:5342941-5505652	0	-	5342941	5343524	789624	5	688,127,92,35,84,	0,2831,3320,3934,162627,
#Deleted in new
chr11	5351507	5352446	chr11:5351507-5352446	3	+	5351507	5352446	789624	1	939,	0,
#Deleted in new
chr11	5354691	5355578	chr11:5354691-5355578	7	+	5354691	5354691	16724991	1	887,	0,
#Deleted in new
chr11	5362614	5362849	chr11:5362614-5362849	7	+	5362614	5362614	16724991	1	235,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	5383811	5393263	chr11:5383811-5393263	0	+	5383811	5383811	8553170	3	106,106,1667,	0,1541,7785,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	5383811	5393263	chr11:5383811-5393263	3	+	5389398	5390379	789624	3	106,106,3880,	0,1541,5572,
#Deleted in new
chr11	5389376	5390434	chr11:5389376-5390434	1	+	5389398	5390379	789624	1	1058,	0,
#Deleted in new
chr11	5402596	5403547	chr11:5402596-5403547	7	+	5402596	5402596	16724991	1	951,	0,
#Deleted in new
chr11	5422110	5423206	chr11:5422110-5423206	3	+	5422200	5423154	789624	1	1096,	0,
#Deleted in new
chr11	5430652	5431602	chr11:5430652-5431602	7	-	5430652	5430652	16724991	1	950,	0,
#Deleted in new
chr11	5440569	5441514	chr11:5440569-5441514	3	-	5440569	5441514	789624	1	945,	0,
#Partially deleted in new
chr11	5449322	5456518	chr11:5449322-5456518	3	+	5453488	5454427	789624	2	42,3260,	0,3936,
#Deleted in new
chr11	5453407	5454477	chr11:5453407-5454477	1	+	5453488	5454427	789624	1	1070,	0,
#Deleted in new
chr11	5468485	5469422	chr11:5468485-5469422	7	-	5468485	5468485	16724991	1	937,	0,
#Deleted in new
chr11	5488684	5489749	chr11:5488684-5489749	3	+	5488706	5489663	789624	1	1065,	0,
#Deleted in new
chr11	5507299	5509985	chr11:5507299-5509985	3	-	5507590	5509558	0	2	2295,112,	0,2574,
#Deleted in new
chr11	5508895	5509958	chr11:5508895-5509958	0	-	5508895	5509558	789624	2	732,85,	0,978,
#Deleted in new
chr11	5514392	5516705	chr11:5514392-5516705	3	-	5515013	5516441	789624	1	2313,	0,
#Partially deleted in new
chr11	5518440	5524955	chr11:5518440-5524955	7	-	5518440	5518440	16724991	6	706,160,165,225,153,70,	0,2311,3180,3876,4471,6445,
#Deleted in new
chr11	5527276	5528174	chr11:5527276-5528174	7	-	5527276	5527276	16724991	1	898,	0,
#Deleted in new
chr11	5544488	5545549	chr11:5544488-5545549	1	-	5544560	5545523	789624	1	1061,	0,
#Partially deleted in new
chr11	5544560	5548533	chr11:5544560-5548533	3	-	5544560	5545505	789624	2	975,82,	0,3891,
#Deleted in new
chr11	5551661	5552563	chr11:5551661-5552563	7	-	5551661	5551661	16724991	1	902,	0,
#Partially deleted in new
chr11	5557095	5561917	chr11:5557095-5561917	5	+	5557095	5557095	16724991	3	68,53,989,	0,1901,3833,
#Partially deleted in new
chr11	5557095	5564327	chr11:5557095-5564327	5	+	5557095	5557095	16724991	2	68,1245,	0,5987,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	5557095	5564327	chr11:5557095-5564327	7	+	5557095	5557095	16724991	2	68,3399,	0,3833,
#Deleted in new
chr11	5560966	5561917	chr11:5560966-5561917	5	+	5560966	5560966	16724991	1	951,	0,
#Deleted in new
chr11	5566677	5567616	chr11:5566677-5567616	7	-	5566677	5566677	16724991	1	939,	0,
#Deleted in new
chr11	5571246	5572192	chr11:5571246-5572192	7	-	5571246	5571246	16724991	1	946,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	5572288	5624894	chr11:5572288-5624894	0	-	5572288	5572288	8553170	4	311,67,119,69,	0,18668,22943,52537,
#Deleted in new
chr11	5580876	5581884	chr11:5580876-5581884	3	+	5580876	5581884	789624	1	1008,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	5588911	5667711	chr11:5588911-5667711	0	-	5588911	5588911	8553170	6	2112,119,179,27,101,23,	0,6320,56773,76744,77069,78777,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	5596108	5612952	chr11:5596108-5612952	1	+	5603312	5611342	789624	8	73,490,96,231,23,101,27,2176,	0,7137,8425,9228,12263,14036,14426,14668,
#Partially deleted in new
chr11	5596109	5610190	chr11:5596109-5610190	0	+	5605342	5610190	789624	5	72,96,231,23,46,	0,8424,9227,12262,14035,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	5596112	5611700	chr11:5596112-5611700	1	+	5605342	5611342	789624	8	69,128,264,231,23,101,27,924,	0,7495,8421,9224,12259,14032,14422,14664,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	5596128	5612423	chr11:5596128-5612423	1	+	5603312	5611342	789624	9	53,316,96,96,231,23,101,27,1647,	0,7117,7511,8405,9208,12243,14016,14406,14648,
#Partially deleted in new
chr11	5596653	5611104	chr11:5596653-5611104	0	+	5596653	5596653	8553170	5	261,23,101,27,328,	0,11718,13491,13881,14123,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	5596655	5612952	chr11:5596655-5612952	3	+	5596897	5611342	789624	8	259,490,96,231,23,101,27,2176,	0,6590,7878,8681,11716,13489,13879,14121,
#Partially deleted in new
chr11	5596724	5644398	chr11:5596724-5644398	3	+	5596897	5643709	789624	14	190,490,96,231,23,101,27,500,96,231,23,101,27,1255,	0,6521,7809,8612,11647,13420,13810,35530,37079,37906,44442,45681,46092,46419,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	5596745	5612952	chr11:5596745-5612952	1	+	5605342	5611342	789624	8	169,128,96,231,23,101,27,2176,	0,6862,7788,8591,11626,13399,13789,14031,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	5596805	5611587	chr11:5596805-5611587	1	+	5605342	5611342	789624	7	109,96,231,23,101,27,811,	0,7728,8531,11566,13339,13729,13971,
#Partially deleted in new
chr11	5596805	5611345	chr11:5596805-5611345	1	+	5605342	5611342	789624	6	109,231,23,101,27,569,	0,8531,11566,13339,13729,13971,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	5603312	5612958	chr11:5603312-5612958	1	+	5603312	5611342	789624	8	249,96,96,231,23,101,27,2182,	0,327,1221,2024,5059,6832,7222,7464,
#Partially deleted in new
chr11	5605171	5611279	chr11:5605171-5611279	0	+	5605171	5605171	8553170	5	396,23,101,27,503,	0,3200,4973,5363,5605,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	5605548	5612958	chr11:5605548-5612958	0	+	5605548	5605548	8553170	5	19,23,101,157,2182,	0,2823,4596,4856,5228,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	5619763	5644398	chr11:5619763-5644398	3	+	5632331	5643709	0	8	260,500,96,231,23,101,27,1255,	0,12491,14040,14867,21403,22642,23053,23380,
#Partially deleted in new
chr11	5624982	5644398	chr11:5624982-5644398	1	+	5632331	5643709	0	8	78,500,96,231,23,101,27,1255,	0,7272,8821,9648,16184,17423,17834,18161,
#Partially deleted in new
chr11	5632280	5641298	chr11:5632280-5641298	0	+	5632280	5632280	8553170	4	474,96,231,132,	0,1523,2350,8886,
#Partially deleted in new
chr11	5634837	5643809	chr11:5634837-5643809	0	+	5634837	5634837	8553170	5	24,23,101,37,666,	0,6329,7568,7979,8306,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	5663556	5685063	chr11:5663556-5685063	3	-	5664808	5680177	0	8	1839,27,101,23,231,96,478,196,	0,2099,2424,4132,14647,15517,16204,21311,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	5663562	5872358	chr11:5663562-5872358	1	-	5664087	5680177	0	11	611,27,101,23,231,96,478,379,103,197,44,	0,2093,2418,4126,14641,15511,16198,21453,192189,197602,208752,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	5663563	5680232	chr11:5663563-5680232	0	-	5666009	5680177	0	6	1832,27,101,231,96,472,	0,2092,2417,14640,15510,16197,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	5663616	5685042	chr11:5663616-5685042	1	-	5665506	5680177	0	7	2066,101,23,231,96,478,175,	0,2364,4072,14587,15457,16144,21251,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	5663830	5679807	chr11:5663830-5679807	0	-	5664034	5679807	789624	6	343,27,23,231,96,47,	0,1825,3858,14373,15243,15930,
#Partially deleted in new
chr11	5665419	5679140	chr11:5665419-5679140	0	-	5665419	5665419	8553170	4	263,101,231,67,	0,561,12784,13654,
#Partially deleted in new
chr11	5665879	5679833	chr11:5665879-5679833	0	-	5665879	5665879	8553170	4	202,231,96,73,	0,12324,13194,13881,
#Deleted in new
chr11	5677945	5679931	chr11:5677945-5679931	0	-	5677945	5677945	8553170	3	489,96,171,	0,1128,1815,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	5689688	5710863	chr11:5689688-5710863	3	+	5696232	5709648	789624	8	211,489,96,231,23,101,27,1811,	0,6478,7559,8626,16905,18484,18888,19364,
#Partially deleted in new
chr11	5689696	5698406	chr11:5689696-5698406	0	+	5696232	5698406	789624	5	8,127,489,96,92,	0,76,6470,7551,8618,
#Partially deleted in new
chr11	5689820	5697013	chr11:5689820-5697013	0	+	5689820	5689820	8553170	2	79,847,	0,6346,
#Partially deleted in new
chr11	5689879	5709163	chr11:5689879-5709163	0	+	5696232	5709163	789624	7	20,489,231,23,101,27,111,	0,6287,8435,16714,18293,18697,19173,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	5691026	5698476	chr11:5691026-5698476	0	+	5696232	5698476	789624	4	150,489,96,162,	0,5140,6221,7288,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	5696491	5709447	chr11:5696491-5709447	0	+	5696491	5696491	8553170	6	164,1298,23,101,27,395,	0,756,10102,11681,12085,12561,
#Partially deleted in new
chr11	5696501	5709137	chr11:5696501-5709137	0	+	5696501	5706604	789624	8	154,96,103,66,23,101,27,85,	0,746,1813,1978,10092,11671,12075,12551,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	5706549	5709317	chr11:5706549-5709317	0	+	5706549	5706549	8553170	4	67,101,27,265,	0,1623,2027,2503,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	5706593	5715043	chr11:5706593-5715043	0	+	5706593	5714727	789624	4	23,101,27,357,	0,1579,1983,8093,
#Partially deleted in new
chr11	5708207	5737089	chr11:5708207-5737089	0	+	5708207	5734201	789624	4	66,27,54,1094,	0,369,25974,27788,
#Partially deleted in new
chr11	5708207	5737089	chr11:5708207-5737089	0	+	5708207	5734201	789624	4	66,27,57,1094,	0,369,25971,27788,
#Deleted in new
chr11	5719289	5720212	chr11:5719289-5720212	7	+	5719289	5719289	16724991	1	923,	0,
#Deleted in new
chr11	5726501	5727464	chr11:5726501-5727464	7	+	5726501	5726501	16724991	1	963,	0,
#Deleted in new
chr11	5736447	5738522	chr11:5736447-5738522	3	+	5736516	5737491	789624	1	2075,	0,
#Partially deleted in new
chr11	5754242	5755905	chr11:5754242-5755905	3	+	5754740	5755706	789624	2	63,1213,	0,450,
#Partially deleted in new
chr11	5754692	5755729	chr11:5754692-5755729	1	+	5754740	5755706	789624	1	1037,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	5761152	5767465	chr11:5761152-5767465	7	+	5761152	5761152	16724991	2	87,2366,	0,3947,
#Deleted in new
chr11	5765095	5766049	chr11:5765095-5766049	5	+	5765095	5765095	16724991	1	954,	0,
#Partially deleted in new
chr11	5776164	5783355	chr11:5776164-5783355	3	-	5777659	5778634	789624	3	2493,224,61,	0,5368,7130,
#Deleted in new
chr11	5777633	5778667	chr11:5777633-5778667	1	-	5777659	5778634	789624	1	1034,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	5786470	5791265	chr11:5786470-5791265	3	-	5787853	5788816	789624	2	2390,155,	0,4640,
#Deleted in new
chr11	5787853	5788816	chr11:5787853-5788816	1	-	5787853	5788816	789624	1	963,	0,
#Deleted in new
chr11	5800363	5801297	chr11:5800363-5801297	7	+	5800363	5800363	16724991	1	934,	0,
#Deleted in new
chr11	5820313	5821348	chr11:5820313-5821348	3	+	5820335	5821301	789624	1	1035,	0,
#Deleted in new
chr11	5840927	5841897	chr11:5840927-5841897	3	-	5840955	5841897	789624	1	970,	0,
#Deleted in new
chr11	5840955	5841952	chr11:5840955-5841952	1	-	5840955	5841952	789624	2	947,7,	0,990,
#Partially deleted in new
chr11	5856673	5857734	chr11:5856673-5857734	3	-	5856748	5857702	789624	1	1061,	0,
#Deleted in new
chr11	5873959	5874892	chr11:5873959-5874892	7	+	5873959	5873959	16724991	1	933,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	5880628	5887079	chr11:5880628-5887079	3	+	5884292	5885231	789624	2	86,2861,	0,3590,
#Deleted in new
chr11	5884270	5885297	chr11:5884270-5885297	1	+	5884292	5885231	789624	1	1027,	0,
#Partially deleted in new
chr11	5893207	5902730	chr11:5893207-5902730	3	+	5900776	5901760	789624	3	63,82,2099,	0,2424,7424,
#Deleted in new
chr11	5903766	5904448	chr11:5903766-5904448	7	+	5903766	5903766	16724991	1	682,	0,
#Partially deleted in new
chr11	5938750	5944984	chr11:5938750-5944984	0	+	5938750	5938750	8553170	3	237,157,179,	0,4579,6055,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	5942250	5951347	chr11:5942250-5951347	1	+	5947346	5948294	789624	3	124,277,4037,	0,2555,5060,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	5942250	5951347	chr11:5942250-5951347	0	+	5942250	5942250	8553170	3	124,277,2661,	0,2555,6436,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	5942250	5951347	chr11:5942250-5951347	3	+	5947346	5948294	789624	4	124,157,277,4037,	0,1079,2555,5060,
#Deleted in new
chr11	5947346	5948294	chr11:5947346-5948294	1	+	5947346	5948294	789624	1	948,	0,
#Deleted in new
chr11	5967176	5968290	chr11:5967176-5968290	1	-	5967176	5968290	789624	2	4,734,	0,380,
#Deleted in new
chr11	5967552	5968494	chr11:5967552-5968494	3	-	5967552	5968494	789624	1	942,	0,
#Deleted in new
chr11	5985891	5986985	chr11:5985891-5986985	3	-	5985940	5986930	789624	1	1094,	0,
#Deleted in new
chr11	5993875	5994995	chr11:5993875-5994995	7	-	5993875	5993875	16724991	1	1120,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	5999444	6006946	chr11:5999444-6006946	1	-	6002050	6002992	789624	3	3584,155,29,	0,6804,7473,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	5999444	6006946	chr11:5999444-6006946	3	-	6002050	6002992	789624	2	3584,29,	0,7473,
#Deleted in new
chr11	6001985	6003194	chr11:6001985-6003194	1	-	6002050	6003148	789624	1	1209,	0,
#Deleted in new
chr11	6001985	6003194	chr11:6001985-6003194	1	-	6002050	6002992	789624	1	1209,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	6016995	6017114	chr11:6016995-6017114	7	+	6016995	6016995	16724991	1	119,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	6019335	6030758	chr11:6019335-6030758	1	-	6026747	6027692	789624	2	8391,57,	0,11366,
#Partially deleted in new
chr11	6021685	6034338	chr11:6021685-6034338	3	-	6026747	6027692	789624	2	6041,55,	0,12598,
#Deleted in new
chr11	6026670	6027741	chr11:6026670-6027741	1	-	6026747	6027704	789624	1	1071,	0,
#Deleted in new
chr11	6026670	6027741	chr11:6026670-6027741	1	-	6026747	6027692	789624	1	1071,	0,
#Deleted in new
chr11	6045806	6046747	chr11:6045806-6046747	7	-	6045806	6045806	16724991	1	941,	0,
#Deleted in new
chr11	6057315	6058275	chr11:6057315-6058275	7	-	6057315	6057315	16724991	1	960,	0,
#Deleted in new
chr11	6066872	6067786	chr11:6066872-6067786	7	-	6066872	6066872	16724991	1	914,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	6107683	6108835	chr11:6107683-6108835	3	+	6107778	6108738	789624	1	1152,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	6108134	6185576	chr11:6108134-6185576	3	-	6108134	6108134	8553170	3	445,85,286,	0,2129,77156,
#Deleted in new
chr11	6128609	6129556	chr11:6128609-6129556	7	+	6128609	6128609	16724991	1	947,	0,
#Deleted in new
chr11	6151640	6152549	chr11:6151640-6152549	7	-	6151640	6151640	16724991	1	909,	0,
#Deleted in new
chr11	6169329	6170408	chr11:6169329-6170408	3	-	6169354	6170326	789624	1	1079,	0,
#Deleted in new
chr11	6199145	6200259	chr11:6199145-6200259	3	+	6199223	6200186	789624	1	1114,	0,
#Deleted in new
chr11	6201900	6203253	chr11:6201900-6203253	3	-	6201900	6201900	8553170	1	1353,	0,
#Partially deleted in new
chr11	6205565	6211132	chr11:6205565-6211132	3	+	6205615	6211042	789624	3	122,799,221,	0,4284,5346,
#Partially deleted in new
chr11	6211334	6234616	chr11:6211334-6234616	1	-	6211505	6224516	789624	12	533,163,179,780,164,80,168,87,159,639,329,73,	0,3076,3398,6036,7265,7636,11107,11476,11745,12275,13044,23209,
#Partially deleted in new
chr11	6211344	6234711	chr11:6211344-6234711	3	-	6211505	6224516	789624	12	523,163,179,780,206,80,168,87,159,639,329,168,	0,3066,3388,6026,7213,7626,11097,11466,11735,12265,13034,23199,
#Deleted in new
chr11	6211344	6215355	chr11:6211344-6215355	0	-	6211344	6211344	8553170	3	523,163,623,	0,3066,3388,
#Partially deleted in new
chr11	6216569	6234663	chr11:6216569-6234663	1	-	6217068	6224516	789624	9	1581,164,80,168,87,159,639,329,120,	0,2030,2401,5872,6241,6510,7040,7809,17974,
#Deleted in new
chr11	6217804	6218741	chr11:6217804-6218741	0	-	6217804	6217804	8553170	2	346,142,	0,795,
#Partially deleted in new
chr11	6234764	6241991	chr11:6234764-6241991	1	+	6239441	6241884	789624	5	93,102,107,73,561,	0,4619,4919,5874,6666,
#Partially deleted in new
chr11	6239091	6244429	chr11:6239091-6244429	3	+	6239206	6244409	789624	6	177,102,107,646,350,481,	0,292,592,974,2339,4857,
#Partially deleted in new
chr11	6259735	6272127	chr11:6259735-6272127	3	+	6259928	6271543	0	5	344,252,250,158,1117,	0,9933,10352,10910,11275,
#Partially deleted in new
chr11	6259805	6272062	chr11:6259805-6272062	1	+	6259928	6271543	789624	4	274,250,158,1052,	0,10282,10840,11205,
#Partially deleted in new
chr11	6259874	6270255	chr11:6259874-6270255	1	+	6259928	6269928	789624	2	205,587,	0,9794,
#Partially deleted in new
chr11	6259925	6272127	chr11:6259925-6272127	1	+	6259928	6271543	0	4	154,252,250,1482,	0,9743,10162,10720,
#Partially deleted in new
chr11	6259925	6269817	chr11:6259925-6269817	1	+	6259928	6264586	789624	3	154,160,149,	0,4548,9743,
#Deleted in new
chr11	6270775	6271214	chr11:6270775-6271214	0	+	6270775	6270775	8553170	2	43,204,	0,235,
#Deleted in new
chr11	6297188	6298606	chr11:6297188-6298606	7	-	6297188	6297188	16724991	1	1418,	0,
#Deleted in new
chr11	6318945	6320647	chr11:6318945-6320647	3	-	6319162	6320476	789624	2	619,555,	0,1147,
#Deleted in new
chr11	6318945	6320062	chr11:6318945-6320062	0	-	6318945	6318945	8553170	2	619,406,	0,711,
#Deleted in new
chr11	6319129	6320155	chr11:6319129-6320155	0	-	6319129	6319129	8553170	2	542,63,	0,963,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	6319140	6346309	chr11:6319140-6346309	3	+	6319140	6319140	8553170	7	557,108,142,225,93,138,1894,	0,4444,4753,11100,14475,23113,25275,
#Deleted in new
chr11	6319143	6320532	chr11:6319143-6320532	1	-	6319162	6320476	789624	3	421,96,440,	0,513,949,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	6362798	6365262	chr11:6362798-6365262	3	+	6362798	6362798	8553170	2	312,976,	0,1488,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	6362811	6365267	chr11:6362811-6365267	1	+	6362811	6362811	8553170	1	2456,	0,
#Partially deleted in new
chr11	6390430	6394995	chr11:6390430-6394995	1	+	6390598	6394607	789624	6	486,773,172,77,146,798,	0,953,2785,3186,3465,3767,
#Deleted in new
chr11	6390439	6392056	chr11:6390439-6392056	0	+	6390439	6390439	8553170	2	374,51,	0,1566,
#Deleted in new
chr11	6390445	6392042	chr11:6390445-6392042	0	+	6391884	6392042	789624	2	194,253,	0,1344,
#Partially deleted in new
chr11	6390472	6394991	chr11:6390472-6394991	0	+	6390598	6393293	789624	6	444,813,172,77,146,794,	0,911,2743,3144,3423,3725,
#Partially deleted in new
chr11	6390474	6394778	chr11:6390474-6394778	3	+	6390598	6394607	789624	6	442,770,172,77,146,581,	0,912,2741,3142,3421,3723,
#Partially deleted in new
chr11	6390502	6394998	chr11:6390502-6394998	0	+	6390598	6393626	789624	5	414,773,77,146,801,	0,881,3114,3393,3695,
#Partially deleted in new
chr11	6390581	6394778	chr11:6390581-6394778	0	+	6390598	6393293	789624	6	335,120,172,77,146,601,	0,802,2634,3035,3314,3596,
#Partially deleted in new
chr11	6391876	6394998	chr11:6391876-6394998	0	+	6391876	6394607	789624	4	320,77,146,801,	0,1740,2019,2321,
#Deleted in new
chr11	6393292	6394373	chr11:6393292-6394373	0	+	6393292	6393292	8553170	3	95,77,478,	0,324,603,
#Deleted in new
chr11	6393517	6394128	chr11:6393517-6394128	0	+	6393517	6393517	8553170	2	176,233,	0,378,
#Partially deleted in new
chr11	6395123	6419111	chr11:6395123-6419111	1	-	6395533	6411347	789624	14	578,177,116,84,85,121,128,150,64,86,57,176,735,127,	0,662,976,5865,6221,6450,6958,7452,8021,8195,8364,8523,15503,23861,
#Partially deleted in new
chr11	6395123	6405417	chr11:6395123-6405417	1	-	6395533	6403766	789624	14	578,177,116,84,85,121,128,150,64,86,57,176,40,285,	0,662,976,5865,6221,6450,6958,7452,8021,8195,8364,8523,9621,10009,
#Partially deleted in new
chr11	6395123	6405417	chr11:6395123-6405417	1	-	6395533	6403766	789624	13	578,177,116,84,85,121,128,150,64,86,57,176,285,	0,662,976,5865,6221,6450,6958,7452,8021,8195,8364,8523,10009,
#Partially deleted in new
chr11	6395123	6404691	chr11:6395123-6404691	1	-	6395533	6404622	789624	13	578,177,116,84,85,121,128,150,64,86,57,176,85,	0,662,976,5865,6221,6450,6958,7452,8021,8195,8364,8523,9483,
#Partially deleted in new
chr11	6395124	6419070	chr11:6395124-6419070	1	-	6395533	6411347	0	14	577,177,116,84,85,115,128,150,64,86,57,176,735,86,	0,661,975,5864,6220,6449,6957,7451,8020,8194,8363,8522,15502,23860,
#Partially deleted in new
chr11	6395124	6419414	chr11:6395124-6419414	3	-	6395533	6411347	0	14	577,177,116,84,85,115,128,150,64,86,57,176,735,69,	0,661,975,5864,6220,6449,6957,7451,8020,8194,8363,8522,15502,24221,
#Deleted in new
chr11	6395124	6396574	chr11:6395124-6396574	0	-	6395124	6395124	8553170	3	577,177,475,	0,661,975,
#Partially deleted in new
chr11	6395124	6419071	chr11:6395124-6419071	0	-	6395124	6411347	789624	15	155,177,116,84,85,115,6,128,150,64,86,57,176,735,87,	0,661,975,5864,6220,6449,6852,6957,7451,8020,8194,8363,8522,15502,23860,
#Partially deleted in new
chr11	6395124	6404843	chr11:6395124-6404843	1	-	6395533	6404805	0	14	577,177,116,84,85,115,6,128,150,64,86,57,176,99,	0,661,975,5864,6220,6449,6852,6957,7451,8020,8194,8363,8522,9620,
#Partially deleted in new
chr11	6395124	6405660	chr11:6395124-6405660	1	-	6395533	6403766	0	14	577,177,116,84,85,115,6,128,150,64,86,57,176,274,	0,661,975,5864,6220,6449,6852,6957,7451,8020,8194,8363,8522,10262,
#Partially deleted in new
chr11	6395124	6419070	chr11:6395124-6419070	1	-	6395533	6411347	0	15	577,177,116,84,85,115,6,128,150,64,86,57,176,735,86,	0,661,975,5864,6220,6449,6852,6957,7451,8020,8194,8363,8522,15502,23860,
#Partially deleted in new
chr11	6395142	6405417	chr11:6395142-6405417	1	-	6395533	6403766	0	15	559,177,116,84,85,115,6,128,150,64,86,57,176,40,285,	0,643,957,5846,6202,6431,6834,6939,7433,8002,8176,8345,8504,9602,9990,
#Partially deleted in new
chr11	6395157	6402784	chr11:6395157-6402784	0	-	6395157	6395157	8553170	8	544,177,116,84,85,115,128,209,	0,628,942,5831,6187,6416,6924,7418,
#Partially deleted in new
chr11	6395162	6405441	chr11:6395162-6405441	1	-	6395533	6401651	789624	10	539,177,116,84,85,115,128,86,57,55,	0,623,937,5826,6182,6411,6919,8156,8325,10224,
#Partially deleted in new
chr11	6395303	6405415	chr11:6395303-6405415	1	-	6395533	6403766	0	14	398,177,116,84,85,115,6,128,150,64,86,57,176,283,	0,482,796,5685,6041,6270,6673,6778,7272,7841,8015,8184,8343,9829,
#Partially deleted in new
chr11	6395429	6404664	chr11:6395429-6404664	1	-	6395533	6404622	0	14	272,177,116,84,85,115,6,128,150,64,86,57,176,58,	0,356,670,5559,5915,6144,6547,6652,7146,7715,7889,8058,8217,9177,
#Partially deleted in new
chr11	6395467	6404898	chr11:6395467-6404898	1	-	6395533	6404805	0	13	234,177,116,84,85,115,128,150,64,86,57,176,154,	0,318,632,5521,5877,6106,6614,7108,7677,7851,8020,8179,9277,
#Partially deleted in new
chr11	6401051	6419071	chr11:6401051-6419071	0	-	6401051	6401051	8553170	9	637,6,128,150,64,86,57,176,87,	0,925,1030,1524,2093,2267,2436,2595,17933,
#Deleted in new
chr11	6401073	6402209	chr11:6401073-6402209	0	-	6401073	6401073	8553170	3	356,409,128,	0,500,1008,
#Deleted in new
chr11	6401176	6404863	chr11:6401176-6404863	0	-	6401176	6401176	8553170	9	512,6,128,150,64,86,57,176,119,	0,800,905,1399,1968,2142,2311,2470,3568,
#Deleted in new
chr11	6401346	6404796	chr11:6401346-6404796	0	-	6401346	6401346	8553170	9	83,115,128,150,64,86,57,412,52,	0,227,735,1229,1798,1972,2141,2300,3398,
#Deleted in new
chr11	6401364	6404796	chr11:6401364-6404796	0	-	6401364	6403766	789624	10	65,115,128,150,64,86,57,176,121,52,	0,209,717,1211,1780,1954,2123,2282,2573,3380,
#Deleted in new
chr11	6401586	6404785	chr11:6401586-6404785	0	-	6401586	6401586	8553170	7	102,644,64,86,57,176,41,	0,495,1558,1732,1901,2060,3158,
#Partially deleted in new
chr11	6403318	6419089	chr11:6403318-6419089	0	-	6403318	6403766	789624	4	86,57,176,105,	0,169,328,15666,
#Partially deleted in new
chr11	6431048	6441064	chr11:6431048-6441064	3	-	6431210	6440963	789624	10	422,163,131,132,213,154,122,72,59,184,	0,592,838,5997,6391,7307,9116,9418,9623,9832,
#Partially deleted in new
chr11	6431301	6437708	chr11:6431301-6437708	0	-	6431301	6431301	8553170	4	169,163,131,663,	0,339,585,5744,
#Deleted in new
chr11	6431394	6432319	chr11:6431394-6432319	0	-	6431394	6431394	8553170	3	76,163,433,	0,246,492,
#Partially deleted in new
chr11	6431905	6441066	chr11:6431905-6441066	0	-	6431905	6431905	8553170	4	112,72,59,186,	0,8561,8766,8975,
#Partially deleted in new
chr11	6431949	6437667	chr11:6431949-6437667	0	-	6431949	6431949	8553170	3	126,132,228,	0,5096,5490,
#Deleted in new
chr11	6437044	6438109	chr11:6437044-6438109	0	-	6437044	6437044	8553170	2	133,670,	0,395,
#Deleted in new
chr11	6437096	6441024	chr11:6437096-6441024	1	-	6437096	6440963	789624	8	25,37,213,154,122,72,59,144,	0,44,343,1259,3068,3370,3575,3784,
#Partially deleted in new
chr11	6437624	6442617	chr11:6437624-6442617	0	-	6437624	6437624	8553170	7	28,158,122,72,59,190,131,	0,727,2540,2842,3047,3821,4862,
#Deleted in new
chr11	6438333	6440987	chr11:6438333-6440987	0	-	6438333	6438333	8553170	5	176,122,72,59,107,	0,1831,2133,2338,2547,
#Deleted in new
chr11	6438478	6440972	chr11:6438478-6440972	0	-	6438478	6438478	8553170	5	31,122,72,59,139,	0,1686,1988,2193,2355,
#Deleted in new
chr11	6439608	6440990	chr11:6439608-6440990	0	-	6439608	6439608	8553170	4	678,72,59,110,	0,858,1063,1272,
#Deleted in new
chr11	6440164	6440975	chr11:6440164-6440975	0	-	6440164	6440164	8553170	4	122,72,53,95,	0,302,507,716,
#Deleted in new
chr11	6440485	6440739	chr11:6440485-6440739	0	-	6440485	6440485	8553170	2	53,68,	0,186,
#Deleted in new
chr11	6448612	6450391	chr11:6448612-6450391	0	-	6448612	6448612	8553170	2	568,1086,	0,693,
#Partially deleted in new
chr11	6448613	6474459	chr11:6448613-6474459	3	-	6449027	6465695	789624	12	567,141,71,169,168,104,733,181,152,232,168,358,	0,692,1937,2278,2657,7458,7683,8682,9082,9451,16951,25488,
#Deleted in new
chr11	6448613	6451969	chr11:6448613-6451969	0	-	6448613	6448613	8553170	5	567,141,71,169,699,	0,692,1937,2278,2657,
#Partially deleted in new
chr11	6448614	6473984	chr11:6448614-6473984	1	-	6449027	6465695	789624	12	566,141,71,169,168,104,733,181,152,232,168,194,	0,691,1936,2277,2656,7457,7682,8681,9081,9450,16950,25176,
#Partially deleted in new
chr11	6448616	6473984	chr11:6448616-6473984	1	-	6449027	6465695	789624	13	564,141,71,169,168,104,733,181,152,232,168,165,194,	0,689,1934,2275,2654,7455,7680,8679,9079,9448,16948,24467,25174,
#Deleted in new
chr11	6448616	6453245	chr11:6448616-6453245	0	-	6448616	6448616	8553170	2	2444,1975,	0,2654,
#Partially deleted in new
chr11	6448616	6473984	chr11:6448616-6473984	1	-	6449027	6458075	789624	11	564,141,71,169,168,104,733,181,152,227,194,	0,689,1934,2275,2654,7455,7680,8679,9079,9453,25174,
#Partially deleted in new
chr11	6449002	6458340	chr11:6449002-6458340	1	-	6449027	6458340	789624	12	178,141,71,169,168,104,733,181,44,75,249,24,	0,303,1548,1889,2268,7069,7294,8293,8693,8770,9062,9314,
#Deleted in new
chr11	6450168	6451299	chr11:6450168-6451299	0	-	6450168	6450168	8553170	3	453,169,29,	0,723,1102,
#Partially deleted in new
chr11	6451537	6456144	chr11:6451537-6456144	0	-	6451537	6451537	8553170	2	585,73,	0,4534,
#Deleted in new
chr11	6456125	6457733	chr11:6456125-6457733	0	-	6456125	6456125	8553170	4	50,454,181,38,	0,450,1170,1570,
#Deleted in new
chr11	6456151	6456611	chr11:6456151-6456611	0	-	6456151	6456151	8553170	2	24,315,	0,145,
#Partially deleted in new
chr11	6456943	6473923	chr11:6456943-6473923	0	-	6456943	6465695	789624	7	86,181,152,232,168,165,133,	0,352,752,1121,8621,16140,16847,
#Partially deleted in new
chr11	6457403	6473893	chr11:6457403-6473893	0	-	6457403	6457403	8553170	4	73,152,227,103,	0,292,666,16387,
#Partially deleted in new
chr11	6458137	6474394	chr11:6458137-6474394	0	-	6458137	6465695	789624	4	159,168,165,293,	0,7427,14946,15964,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	6474682	6481479	chr11:6474682-6481479	1	-	6477112	6480421	789624	8	2586,175,158,222,218,97,141,249,	0,3035,3358,4055,4457,5289,5640,6548,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	6475679	6481312	chr11:6475679-6481312	3	-	6477112	6480421	0	8	1589,175,158,222,119,97,101,82,	0,2038,2361,3058,3460,4292,4643,5551,
#Deleted in new
chr11	6476518	6481436	chr11:6476518-6481436	1	-	6477112	6480421	0	8	750,175,158,222,119,97,141,206,	0,1199,1522,2219,2621,3453,3804,4712,
#Deleted in new
chr11	6476553	6481324	chr11:6476553-6481324	0	-	6478134	6480421	789624	8	715,175,158,101,119,97,101,94,	0,1164,1487,2305,2586,3418,3769,4677,
#Deleted in new
chr11	6476733	6481343	chr11:6476733-6481343	1	-	6477112	6480031	0	6	535,175,158,222,97,113,	0,984,1307,2004,3238,4497,
#Deleted in new
chr11	6476813	6481434	chr11:6476813-6481434	1	-	6477112	6480053	0	7	455,175,158,222,119,97,204,	0,904,1227,1924,2326,3158,4417,
#Deleted in new
chr11	6478083	6481314	chr11:6478083-6481314	1	-	6478580	6480421	789624	7	115,74,222,119,97,141,84,	0,495,654,1056,1888,2239,3147,
#Deleted in new
chr11	6479305	6481297	chr11:6479305-6481297	0	-	6479305	6479305	8553170	3	763,141,67,	0,1017,1925,
#Deleted in new
chr11	6479656	6481343	chr11:6479656-6481343	0	-	6479656	6479656	8553170	2	807,113,	0,1574,
#Deleted in new
chr11	6480706	6481323	chr11:6480706-6481323	0	-	6480706	6480706	8553170	2	524,39,	0,578,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	6481446	6484679	chr11:6481446-6484679	3	+	6481516	6482221	789624	3	109,96,2635,	0,310,598,
#Partially deleted in new
chr11	6481484	6508978	chr11:6481484-6508978	0	+	6481516	6482221	789624	4	71,245,174,99,	0,560,21268,27395,
#Deleted in new
chr11	6481500	6482285	chr11:6481500-6482285	0	+	6481500	6481500	8553170	2	352,241,	0,544,
#Deleted in new
chr11	6481500	6482798	chr11:6481500-6482798	1	+	6481516	6482221	789624	2	55,754,	0,544,
#Partially deleted in new
chr11	6481500	6498239	chr11:6481500-6498239	3	+	6481516	6482221	8553170	5	55,96,245,83,116,	0,256,544,16084,16623,
#Deleted in new
chr11	6481505	6483060	chr11:6481505-6483060	0	+	6481516	6482221	789624	3	50,245,221,	0,539,1334,
#Deleted in new
chr11	6481507	6483058	chr11:6481507-6483058	0	+	6481516	6482221	789624	4	48,96,245,219,	0,249,537,1332,
#Partially deleted in new
chr11	6488185	6489377	chr11:6488185-6489377	7	-	6488185	6488185	16724991	2	133,553,	0,639,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	6497259	6504200	chr11:6497259-6504200	0	+	6497259	6497259	8553170	4	72,83,239,1448,	0,325,1463,5493,
#Partially deleted in new
chr11	6497295	6572022	chr11:6497295-6572022	3	+	6498215	6571986	789624	43	36,83,1191,174,204,111,157,255,138,52,266,244,158,493,128,199,95,208,126,98,2875,178,193,289,1615,209,205,103,150,183,432,472,297,153,179,966,187,123,202,92,150,806,387,	0,289,475,5457,11584,11866,13977,22304,22669,22942,31226,31582,35731,36385,41087,41316,41923,42580,46825,47278,47496,50567,50914,51349,59387,61189,61606,61885,65686,66086,66397,67037,68399,68945,69291,69599,70760,71158,71369,72713,72951,73322,74340,
#Deleted in new
chr11	6497295	6498232	chr11:6497295-6498232	0	+	6498215	6498232	8553170	3	36,83,462,	0,289,475,
#Partially deleted in new
chr11	6497300	6520860	chr11:6497300-6520860	1	+	6498215	6520111	789624	8	31,1377,174,204,111,157,255,896,	0,284,5452,11579,11861,13972,22299,22664,
#Deleted in new
chr11	6497304	6498689	chr11:6497304-6498689	0	+	6497304	6497304	8553170	4	27,83,74,382,	0,280,466,1003,
#Partially deleted in new
chr11	6498215	6572022	chr11:6498215-6572022	1	+	6498215	6571986	789624	41	746,174,204,111,157,255,138,52,266,244,158,493,128,199,95,208,126,98,2875,178,193,289,1615,209,205,103,150,183,432,472,297,153,179,966,187,123,202,92,150,806,387,	0,4537,10664,10946,13057,21384,21749,22022,30306,30662,34811,35465,40167,40396,41003,41660,45905,46358,46576,49647,49994,50429,58467,60269,60686,60965,64766,65166,65477,66117,67479,68025,68371,68679,69840,70238,70449,71793,72031,72402,73420,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	6508212	6520858	chr11:6508212-6520858	0	+	6508212	6508212	8553170	5	871,111,157,255,894,	0,949,3060,11387,11752,
#Partially deleted in new
chr11	6528976	6593758	chr11:6528976-6593758	0	+	6528976	6528976	8553170	7	145,158,126,199,2011,103,125,	0,4050,4704,9635,27706,30204,64657,
#Partially deleted in new
chr11	6533923	6549035	chr11:6533923-6549035	0	+	6533923	6538654	789624	10	306,128,199,95,208,126,98,2790,540,391,	0,4459,4688,5295,5952,10197,10650,10953,13939,14721,
#Deleted in new
chr11	6546042	6549037	chr11:6546042-6549037	0	+	6546042	6546042	8553170	3	1624,540,393,	0,1820,2602,
#Partially deleted in new
chr11	6558053	6564018	chr11:6558053-6564018	0	+	6558053	6563428	789624	7	244,209,205,103,274,183,257,	0,431,848,1127,4928,5328,5708,
#Partially deleted in new
chr11	6558053	6563317	chr11:6558053-6563317	0	+	6558053	6558053	8553170	3	640,103,336,	0,1127,4928,
#Partially deleted in new
chr11	6558933	6564019	chr11:6558933-6564019	0	+	6558933	6558933	8553170	4	173,103,150,638,	0,247,4048,4448,
#Partially deleted in new
chr11	6564076	6572022	chr11:6564076-6572022	0	+	6564076	6564076	8553170	11	48,472,1071,966,187,123,202,92,150,806,387,	0,256,1618,2818,3979,4377,4588,5932,6170,6541,7559,
#Partially deleted in new
chr11	6564436	6572027	chr11:6564436-6572027	0	+	6564436	6564436	8553170	9	368,1071,936,187,123,202,388,806,392,	0,1258,2488,3619,4017,4228,5572,6181,7199,
#Partially deleted in new
chr11	6564748	6572027	chr11:6564748-6572027	0	+	6564748	6564748	8553170	9	56,297,293,179,966,187,123,202,2019,	0,946,1352,1838,2146,3307,3705,3916,5260,
#Partially deleted in new
chr11	6566104	6572019	chr11:6566104-6572019	0	+	6566104	6566104	8553170	10	289,179,966,187,123,202,92,150,806,384,	0,482,790,1951,2349,2560,3904,4142,4513,5531,
#Deleted in new
chr11	6566606	6567352	chr11:6566606-6567352	0	+	6566606	6567352	789624	2	159,428,	0,318,
#Partially deleted in new
chr11	6567348	6572027	chr11:6567348-6572027	0	+	6567348	6567348	8553170	6	512,187,123,202,1415,392,	0,707,1105,1316,2660,4287,
#Partially deleted in new
chr11	6568704	6571814	chr11:6568704-6571814	0	+	6568704	6571808	789624	3	162,92,179,	0,1304,2931,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	6595074	6603620	chr11:6595074-6603620	3	-	6600145	6603502	0	7	5191,97,107,130,454,364,217,	0,5411,5594,5851,6074,6777,8329,
#Deleted in new
chr11	6599919	6603579	chr11:6599919-6603579	1	-	6600145	6603502	789624	4	346,97,107,176,	0,566,749,3484,
#Deleted in new
chr11	6599942	6601304	chr11:6599942-6601304	0	-	6599942	6599942	8553170	3	640,107,379,	0,726,983,
#Deleted in new
chr11	6599942	6603604	chr11:6599942-6603604	0	-	6601144	6603502	789624	5	640,107,677,364,201,	0,726,983,1909,3461,
#Deleted in new
chr11	6601253	6603597	chr11:6601253-6603597	0	-	6602126	6603502	789624	3	349,413,194,	0,598,2150,
#Deleted in new
chr11	6603641	6604420	chr11:6603641-6604420	3	-	6603641	6603641	8553170	2	37,362,	0,417,
#Partially deleted in new
chr11	6603707	6610874	chr11:6603707-6610874	1	+	6608744	6610611	0	12	115,135,96,97,84,86,110,128,122,100,131,413,	0,518,4686,4986,5176,5363,5591,5804,6016,6228,6440,6754,
#Partially deleted in new
chr11	6603730	6610870	chr11:6603730-6610870	3	+	6604271	6610611	0	13	92,181,166,96,97,84,86,110,128,122,100,131,409,	0,449,4315,4663,4963,5153,5340,5568,5781,5993,6205,6417,6731,
#Partially deleted in new
chr11	6603730	6610874	chr11:6603730-6610874	0	+	6604271	6608427	789624	12	92,135,96,97,84,86,110,128,122,100,131,413,	0,495,4663,4963,5153,5340,5568,5781,5993,6205,6417,6731,
#Partially deleted in new
chr11	6603743	6610835	chr11:6603743-6610835	1	+	6604271	6610611	789624	12	79,135,166,96,274,86,110,128,122,100,131,374,	0,482,4302,4650,4950,5327,5555,5768,5980,6192,6404,6718,
#Partially deleted in new
chr11	6603757	6610833	chr11:6603757-6610833	1	+	6604271	6610611	0	13	65,135,166,96,97,84,86,110,128,122,100,131,372,	0,468,4288,4636,4936,5126,5313,5541,5754,5966,6178,6390,6704,
#Partially deleted in new
chr11	6603772	6609156	chr11:6603772-6609156	0	+	6604271	6604874	789624	8	50,181,91,166,96,97,84,86,	0,407,1080,4273,4621,4921,5111,5298,
#Partially deleted in new
chr11	6603773	6610611	chr11:6603773-6610611	0	+	6603773	6603773	8553170	11	49,181,166,96,463,110,128,122,100,131,150,	0,406,4272,4620,4920,5525,5738,5950,6162,6374,6688,
#Partially deleted in new
chr11	6603781	6609393	chr11:6603781-6609393	0	+	6604271	6604874	789624	9	41,135,91,166,96,97,84,86,95,	0,444,1071,4264,4612,4912,5102,5289,5517,
#Partially deleted in new
chr11	6603786	6610866	chr11:6603786-6610866	1	+	6604271	6610611	0	11	36,181,166,96,84,110,128,122,100,131,405,	0,393,4259,4607,5097,5512,5725,5937,6149,6361,6675,
#Deleted in new
chr11	6603795	6604726	chr11:6603795-6604726	0	+	6603795	6603795	8553170	2	27,547,	0,384,
#Partially deleted in new
chr11	6603815	6610870	chr11:6603815-6610870	1	+	6604271	6610611	0	12	545,166,96,97,84,86,110,128,122,100,131,409,	0,4230,4578,4878,5068,5255,5483,5696,5908,6120,6332,6646,
#Deleted in new
chr11	6604271	6604874	chr11:6604271-6604874	1	+	6604271	6604874	789624	2	89,22,	0,581,
#Partially deleted in new
chr11	6604295	6610871	chr11:6604295-6610871	0	+	6604295	6610611	789624	4	65,166,96,269,	0,3750,4098,6307,
#Deleted in new
chr11	6606295	6611948	chr11:6606295-6611948	0	-	6606295	6606295	8553170	3	4716,115,561,	0,4893,5092,
#Deleted in new
chr11	6607670	6608418	chr11:6607670-6608418	0	+	6607670	6607670	8553170	2	541,25,	0,723,
#Deleted in new
chr11	6608265	6610031	chr11:6608265-6610031	0	+	6608265	6608265	8553170	8	224,97,84,86,110,128,122,96,	0,428,618,805,1033,1246,1458,1670,
#Deleted in new
chr11	6608666	6610135	chr11:6608666-6610135	3	-	6608666	6608666	8553170	3	59,142,228,	0,170,1241,
#Deleted in new
chr11	6608745	6609815	chr11:6608745-6609815	0	+	6608745	6608745	8553170	4	45,525,128,92,	0,138,766,978,
#Deleted in new
chr11	6610841	6612667	chr11:6610841-6612667	3	-	6610921	6612189	0	5	170,115,65,155,710,	0,347,546,822,1116,
#Deleted in new
chr11	6610844	6612141	chr11:6610844-6612141	0	-	6610921	6612141	789624	4	167,115,65,78,	0,344,543,1219,
#Deleted in new
chr11	6610882	6616594	chr11:6610882-6616594	3	-	6610882	6610882	8553170	9	129,115,65,284,126,159,121,70,280,	0,306,505,652,3983,4288,4559,5122,5432,
#Deleted in new
chr11	6611187	6612539	chr11:6611187-6612539	0	-	6611187	6611187	8553170	4	116,65,155,166,	0,200,476,1186,
#Deleted in new
chr11	6611400	6612177	chr11:6611400-6612177	0	-	6611400	6611400	8553170	2	418,220,	0,557,
#Deleted in new
chr11	6612762	6619485	chr11:6612762-6619485	3	-	6614545	6619400	0	13	1924,126,159,121,70,189,199,179,128,151,140,72,102,	0,2103,2408,2679,3242,3552,3898,4212,4538,4863,6013,6433,6621,
#Deleted in new
chr11	6612771	6619396	chr11:6612771-6619396	1	-	6614545	6616817	0	12	1915,126,159,121,70,189,199,179,128,151,140,201,	0,2094,2399,2670,3233,3543,3889,4203,4529,4854,6004,6424,
#Deleted in new
chr11	6612781	6615455	chr11:6612781-6615455	0	-	6612781	6612781	8553170	2	2210,285,	0,2389,
#Deleted in new
chr11	6612781	6619413	chr11:6612781-6619413	1	-	6614545	6619400	789624	11	1905,126,159,121,70,189,199,179,140,72,30,	0,2084,2389,2660,3223,3533,3879,4193,5994,6414,6602,
#Deleted in new
chr11	6612783	6619353	chr11:6612783-6619353	1	-	6614545	6616817	0	12	1903,126,159,121,70,189,199,179,75,151,140,158,	0,2082,2387,2658,3221,3531,3877,4191,4570,4842,5992,6412,
#Deleted in new
chr11	6612783	6619429	chr11:6612783-6619429	0	-	6612783	6612783	8553170	12	1903,126,159,121,70,545,179,128,151,140,72,46,	0,2082,2387,2658,3221,3531,4191,4517,4842,5992,6412,6600,
#Deleted in new
chr11	6612783	6619381	chr11:6612783-6619381	0	-	6615775	6616817	789624	11	1903,126,159,121,84,70,199,179,128,151,186,	0,2082,2387,2658,2981,3221,3877,4191,4517,4842,6412,
#Deleted in new
chr11	6612783	6619429	chr11:6612783-6619429	0	-	6612783	6612783	8553170	11	1903,126,159,121,70,545,454,151,140,72,46,	0,2082,2387,2658,3221,3531,4191,4842,5992,6412,6600,
#Deleted in new
chr11	6612785	6619429	chr11:6612785-6619429	1	-	6614545	6619400	789624	12	1901,126,159,121,70,199,179,128,151,140,72,46,	0,2080,2385,2656,3219,3875,4189,4515,4840,5990,6410,6598,
#Deleted in new
chr11	6612793	6619429	chr11:6612793-6619429	0	-	6612793	6612793	8553170	12	1893,126,159,121,70,189,199,454,151,140,72,46,	0,2072,2377,2648,3211,3521,3867,4181,4832,5982,6402,6590,
#Deleted in new
chr11	6612793	6619422	chr11:6612793-6619422	0	-	6612793	6612793	8553170	8	1893,126,159,1418,802,140,72,39,	0,2072,2377,2648,4181,5982,6402,6590,
#Deleted in new
chr11	6612800	6619369	chr11:6612800-6619369	1	-	6614545	6616817	0	12	1886,126,159,121,70,189,199,179,70,151,140,174,	0,2065,2370,2641,3204,3514,3860,4174,4558,4825,5975,6395,
#Deleted in new
chr11	6612808	6619409	chr11:6612808-6619409	1	-	6614545	6616817	0	11	1878,126,159,121,70,189,199,179,128,151,214,	0,2057,2362,2633,3196,3506,3852,4166,4492,4817,6387,
#Deleted in new
chr11	6612831	6618891	chr11:6612831-6618891	0	-	6614545	6618891	789624	9	1855,126,159,121,70,189,128,151,116,	0,2034,2339,2610,3173,3483,4469,4794,5944,
#Deleted in new
chr11	6612842	6616482	chr11:6612842-6616482	0	-	6612842	6612842	8553170	3	1844,126,1312,	0,2023,2328,
#Deleted in new
chr11	6612857	6619448	chr11:6612857-6619448	0	-	6617745	6619400	789624	12	1829,126,159,121,70,189,199,179,128,151,72,65,	0,2008,2313,2584,3147,3457,3803,4117,4443,4768,6338,6526,
#Deleted in new
chr11	6612875	6619429	chr11:6612875-6619429	0	-	6617114	6619400	789624	13	1811,126,159,121,70,189,199,179,70,151,140,72,46,	0,1990,2295,2566,3129,3439,3785,4099,4483,4750,5900,6320,6508,
#Deleted in new
chr11	6612911	6619381	chr11:6612911-6619381	0	-	6615775	6616817	789624	13	1775,126,159,121,84,70,189,199,179,128,151,140,186,	0,1954,2259,2530,2853,3093,3403,3749,4063,4389,4714,5864,6284,
#Deleted in new
chr11	6612967	6618338	chr11:6612967-6618338	0	-	6612967	6612967	8553170	9	1719,126,159,121,70,189,199,454,713,	0,1898,2203,2474,3037,3347,3693,4007,4658,
#Deleted in new
chr11	6612975	6619421	chr11:6612975-6619421	0	-	6612975	6612975	8553170	12	1711,126,159,121,70,189,199,179,128,1290,72,38,	0,1890,2195,2466,3029,3339,3685,3999,4325,4650,6220,6408,
#Deleted in new
chr11	6613032	6619413	chr11:6613032-6619413	0	-	6618873	6619400	789624	13	1654,126,159,121,70,189,199,179,128,151,140,64,30,	0,1833,2138,2409,2972,3282,3628,3942,4268,4593,5743,6163,6351,
#Deleted in new
chr11	6613303	6616479	chr11:6613303-6616479	0	-	6615502	6616479	789624	6	1383,126,159,104,70,165,	0,1562,1867,2138,2701,3011,
#Deleted in new
chr11	6614600	6616269	chr11:6614600-6616269	0	-	6614600	6614600	8553170	5	86,126,159,121,265,	0,265,570,841,1404,
#Deleted in new
chr11	6615321	6618808	chr11:6615321-6618808	0	-	6615321	6618808	789624	6	8,121,70,128,151,33,	0,120,683,1979,2304,3454,
#Deleted in new
chr11	6616422	6619429	chr11:6616422-6619429	0	-	6616422	6616422	8553170	6	81,70,151,140,72,46,	0,936,1203,2353,2773,2961,
#Deleted in new
chr11	6616511	6619413	chr11:6616511-6619413	0	-	6616511	6616511	8553170	4	348,454,1290,218,	0,463,1114,2684,
#Deleted in new
chr11	6616543	6617464	chr11:6616543-6617464	0	-	6616543	6616543	8553170	3	316,179,164,	0,431,757,
#Deleted in new
chr11	6616546	6619429	chr11:6616546-6619429	0	-	6616546	6616546	8553170	4	882,1290,72,46,	0,1079,2649,2837,
#Deleted in new
chr11	6616598	6619413	chr11:6616598-6619413	0	-	6616598	6616598	8553170	5	261,454,1290,72,30,	0,376,1027,2597,2785,
#Deleted in new
chr11	6616649	6619413	chr11:6616649-6619413	0	-	6616649	6616649	8553170	4	210,454,1642,30,	0,325,976,2734,
#Deleted in new
chr11	6616974	6619401	chr11:6616974-6619401	0	-	6616974	6616974	8553170	6	179,75,151,140,72,18,	0,379,651,1801,2221,2409,
#Deleted in new
chr11	6617061	6619372	chr11:6617061-6619372	0	-	6617061	6617061	8553170	4	367,151,140,177,	0,564,1714,2134,
#Deleted in new
chr11	6617207	6619403	chr11:6617207-6619403	0	-	6617745	6619400	789624	4	221,151,72,20,	0,418,1988,2176,
#Deleted in new
chr11	6617747	6619421	chr11:6617747-6619421	0	-	6617747	6617747	8553170	3	29,492,38,	0,1028,1636,
#Deleted in new
chr11	6618056	6619448	chr11:6618056-6619448	1	-	6618758	6619400	789624	3	859,72,65,	0,1139,1327,
#Deleted in new
chr11	6618214	6619429	chr11:6618214-6619429	1	-	6619191	6619400	789624	2	1053,46,	0,1169,
#Deleted in new
chr11	6618789	6619764	chr11:6618789-6619764	3	+	6618789	6618789	8553170	2	66,398,	0,577,
#Partially deleted in new
chr11	6621322	6655854	chr11:6621322-6655854	3	-	6621778	6641613	789624	21	3068,139,284,131,155,212,114,879,210,126,240,865,158,97,194,1026,237,232,189,1917,292,	0,3407,3875,4274,4597,4846,5229,5466,7298,8129,8349,8676,9730,9988,10293,10708,12089,12466,12795,18494,34240,
#Deleted in new
chr11	6621450	6622322	chr11:6621450-6622322	3	+	6621450	6621450	8553170	2	605,215,	0,657,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	6630602	6635208	chr11:6630602-6635208	3	+	6630602	6630602	8553170	3	94,116,277,	0,711,4329,
#Deleted in new
chr11	6680781	6683401	chr11:6680781-6683401	3	-	6682117	6683296	0	3	1621,69,279,	0,1965,2341,
#Deleted in new
chr11	6681150	6682400	chr11:6681150-6682400	0	-	6681150	6681150	8553170	2	78,225,	0,1025,
#Deleted in new
chr11	6681950	6683296	chr11:6681950-6683296	0	-	6681950	6681950	8553170	2	452,550,	0,796,
#Deleted in new
chr11	6682148	6683316	chr11:6682148-6683316	0	-	6682148	6683296	789624	2	254,194,	0,974,
#Deleted in new
chr11	6685890	6686369	chr11:6685890-6686369	7	-	6685890	6685890	16724991	1	479,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	6713535	6746439	chr11:6713535-6746439	7	-	6713535	6713535	16724991	2	8347,91,	0,32813,
#Deleted in new
chr11	6714609	6721880	chr11:6714609-6721880	5	-	6714609	6714609	16724991	1	7271,	0,
#Deleted in new
chr11	6748130	6750324	chr11:6748130-6750324	7	+	6748130	6748130	16724991	1	2194,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	6765625	6771976	chr11:6765625-6771976	1	-	6768006	6768957	789624	2	3869,355,	0,5996,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	6765625	6771976	chr11:6765625-6771976	3	-	6768006	6768957	789624	2	3866,355,	0,5996,
#Deleted in new
chr11	6767986	6769055	chr11:6767986-6769055	1	-	6768006	6768957	789624	1	1069,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	6783019	6791558	chr11:6783019-6791558	3	+	6785037	6785988	789624	2	452,6541,	0,1998,
#Partially deleted in new
chr11	6783019	6791558	chr11:6783019-6791558	0	+	6783019	6783019	8553170	3	452,385,897,	0,1998,7642,
#Deleted in new
chr11	6785016	6786014	chr11:6785016-6786014	1	+	6785037	6785988	789624	1	998,	0,
#Deleted in new
chr11	6791735	6799689	chr11:6791735-6799689	3	-	6794724	6795708	789624	2	4149,146,	0,7808,
#Deleted in new
chr11	6794524	6795897	chr11:6794524-6795897	1	-	6794724	6795708	789624	1	1373,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	6821941	6926877	chr11:6821941-6926877	3	-	6821941	6821941	8553170	4	4153,65,78,526,	0,28812,102556,104410,
#Deleted in new
chr11	6843663	6844666	chr11:6843663-6844666	7	-	6843663	6843663	16724991	1	1003,	0,
#Deleted in new
chr11	6845651	6846705	chr11:6845651-6846705	3	+	6845682	6846636	789624	1	1054,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	6863056	6874717	chr11:6863056-6874717	3	+	6869754	6870666	789624	2	295,5095,	0,6566,
#Deleted in new
chr11	6869692	6870745	chr11:6869692-6870745	1	+	6869754	6870666	789624	1	1053,	0,
#Deleted in new
chr11	6876624	6877619	chr11:6876624-6877619	3	+	6876647	6877595	789624	1	995,	0,
#Deleted in new
chr11	6891489	6892599	chr11:6891489-6892599	3	-	6891573	6892500	789624	1	1110,	0,
#Deleted in new
chr11	6920973	6922043	chr11:6920973-6922043	3	+	6921001	6921994	789624	1	1070,	0,
#Partially deleted in new
chr11	6926403	6956105	chr11:6926403-6956105	0	+	6926403	6926403	8553170	6	282,146,579,83,96,416,	0,1258,5690,15167,17142,29286,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	6926422	6957837	chr11:6926422-6957837	3	+	6932272	6956531	789624	7	263,146,579,83,133,96,2148,	0,1239,5671,15148,16660,17123,29267,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	6926423	6988930	chr11:6926423-6988930	0	+	6932272	6943608	789624	7	438,146,579,83,96,93,715,	0,1238,5670,15147,17122,29266,61792,
#Partially deleted in new
chr11	6926426	7001004	chr11:6926426-7001004	0	+	6932272	6955695	789624	7	302,146,579,83,93,105,896,	0,1235,5667,15144,29263,61789,73682,
#Partially deleted in new
chr11	6926462	6956110	chr11:6926462-6956110	0	+	6926462	6926462	8553170	5	223,146,579,83,421,	0,1199,5631,15108,29227,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	6926521	6957848	chr11:6926521-6957848	1	+	6932272	6956531	789624	6	207,579,83,133,96,2159,	0,5572,15049,16561,17024,29168,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	6932185	6984632	chr11:6932185-6984632	1	+	6932272	6984238	789624	6	487,83,133,96,93,504,	0,9385,10897,11360,23504,51943,
#Partially deleted in new
chr11	6943189	6956533	chr11:6943189-6956533	0	+	6943189	6943189	8553170	4	26,96,93,362,	0,356,12500,12982,
#Partially deleted in new
chr11	6999317	7020368	chr11:6999317-7020368	3	-	6999861	7002835	789624	3	2238,147,296,	0,3391,20755,
#Partially deleted in new
chr11	6999362	7020235	chr11:6999362-7020235	1	-	6999861	7002835	789624	4	2193,143,63,163,	0,3346,20320,20710,
#Partially deleted in new
chr11	7001447	7020314	chr11:7001447-7020314	0	-	7001447	7001447	8553170	4	108,143,63,242,	0,1261,18235,18625,
#Partially deleted in new
chr11	7015819	7020342	chr11:7015819-7020342	0	-	7015819	7015819	789624	3	205,63,270,	0,3863,4253,
#Partially deleted in new
chr11	7020445	7071308	chr11:7020445-7071308	3	+	7038586	7071308	0	12	325,310,72,1597,165,168,171,171,171,171,171,136,	0,18120,19268,21942,26222,29225,37231,37834,39448,41887,49840,50727,
#Partially deleted in new
chr11	7089026	7090900	chr11:7089026-7090900	3	+	7089120	7090299	789624	1	1874,	0,
#Partially deleted in new
chr11	7222932	7230863	chr11:7222932-7230863	3	+	7222932	7222932	8553170	2	75,454,	0,7477,
#Deleted in new
chr11	7234765	7234837	chr11:7234765-7234837	3	+	7234765	7234765	5263520	1	72,	0,
#Partially deleted in new
chr11	7238777	7444547	chr11:7238777-7444547	0	+	7238867	7314196	789624	9	139,352,547,153,121,172,130,121,359,	0,64261,74617,75407,177264,179179,181728,199768,205411,
#Partially deleted in new
chr11	7251949	7469042	chr11:7251949-7469042	3	+	7252186	7466800	789624	7	382,352,547,121,172,130,2251,	0,51089,61445,164092,166007,168556,214842,
#Partially deleted in new
chr11	7252169	7469037	chr11:7252169-7469037	0	+	7252186	7416066	789624	6	162,352,121,172,130,2246,	0,50869,163872,165787,168336,214622,
#Partially deleted in new
chr11	7427265	7440525	chr11:7427265-7440525	0	-	7427265	7427265	8553170	4	389,172,134,32,	0,607,12861,13228,
#Partially deleted in new
chr11	7427265	7504872	chr11:7427265-7504872	3	-	7427265	7427265	8553170	8	389,172,1593,70,148,98,126,107,	0,607,12861,23107,30530,33973,42375,77500,
#Partially deleted in new
chr11	7427586	7435630	chr11:7427586-7435630	1	-	7427586	7427586	8553170	4	68,36,40,484,	0,422,7396,7560,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	7435722	7465790	chr11:7435722-7465790	0	-	7435722	7435722	8553170	4	255,113,98,38,	0,4404,25516,30030,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	7435827	7440692	chr11:7435827-7440692	0	-	7435827	7435827	8553170	2	150,566,	0,4299,
#Partially deleted in new
chr11	7437626	7461344	chr11:7437626-7461344	1	-	7437626	7437626	789624	4	4093,70,164,106,	0,12746,20169,23612,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	7469686	7512515	chr11:7469686-7512515	0	-	7469686	7469686	8553170	2	80,393,	0,42436,
#Partially deleted in new
chr11	7485387	7510349	chr11:7485387-7510349	1	+	7485875	7510188	789624	4	249,130,289,952,	0,487,2739,24010,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	7485481	7511377	chr11:7485481-7511377	3	+	7485875	7510188	789624	3	523,289,1980,	0,2645,23916,
#Partially deleted in new
chr11	7485505	7488206	chr11:7485505-7488206	0	+	7485875	7488206	789624	2	499,76,	0,2625,
#Partially deleted in new
chr11	7485525	7488965	chr11:7485525-7488965	0	+	7485525	7485525	8553170	2	479,839,	0,2601,
#Partially deleted in new
chr11	7485605	7510412	chr11:7485605-7510412	1	+	7485875	7509415	789624	3	399,24,1015,	0,2521,23792,
#Partially deleted in new
chr11	7513297	7565756	chr11:7513297-7565756	0	+	7549475	7565756	789624	3	180,100,204,	0,36142,52255,
#Partially deleted in new
chr11	7513767	7565756	chr11:7513767-7565756	0	+	7549475	7565756	789624	4	354,156,100,204,	0,34576,35672,51785,
#Partially deleted in new
chr11	7513769	7653756	chr11:7513769-7653756	3	+	7549475	7653218	0	24	352,100,215,93,114,132,93,115,62,76,104,68,58,42,139,142,129,151,112,89,123,126,189,733,	0,35670,51783,79362,83790,96521,107165,112007,114515,115689,117155,119097,120725,121782,125962,127709,128528,134617,135030,135377,135762,137070,137886,139254,
#Partially deleted in new
chr11	7538276	7610316	chr11:7538276-7610316	0	+	7549475	7610316	789624	6	77,100,215,93,114,26,	0,11163,27276,54855,59283,72014,
#Partially deleted in new
chr11	7539177	7565698	chr11:7539177-7565698	0	+	7549475	7565698	789624	3	288,100,146,	0,10262,26375,
#Partially deleted in new
chr11	7565624	7598303	chr11:7565624-7598303	0	+	7565624	7598303	789624	4	143,93,114,57,	0,27507,31935,32622,
#Deleted in new
chr11	7568865	7572046	chr11:7568865-7572046	3	-	7568865	7568865	8553170	2	196,354,	0,2827,
#Partially deleted in new
chr11	7573904	7629511	chr11:7573904-7629511	0	+	7597661	7629511	789624	8	118,93,114,132,93,115,62,53,	0,19227,23655,36386,47030,51872,54380,55554,
#Partially deleted in new
chr11	7576407	7653760	chr11:7576407-7653760	1	+	7597661	7653218	789624	22	109,93,114,132,93,115,62,76,104,68,58,42,139,142,129,151,112,89,123,126,189,737,	0,16724,21152,33883,44527,49369,51877,53051,54517,56459,58087,59144,63324,65071,65890,71979,72392,72739,73124,74432,75248,76616,
#Partially deleted in new
chr11	7576766	7653753	chr11:7576766-7653753	0	+	7576766	7576766	8553170	4	872,93,132,500,	0,16365,33524,76487,
#Partially deleted in new
chr11	7577023	7625829	chr11:7577023-7625829	1	+	7597661	7625829	8553170	7	138,93,114,132,183,93,53,	0,16108,20536,33267,40088,43911,48753,
#Partially deleted in new
chr11	7577039	7625799	chr11:7577039-7625799	0	+	7597661	7625799	789624	6	122,93,114,132,93,23,	0,16092,20520,33251,43895,48737,
#Partially deleted in new
chr11	7577116	7656977	chr11:7577116-7656977	0	+	7577116	7577116	8553170	3	316,35,251,	0,78297,79610,
#Partially deleted in new
chr11	7597185	7653351	chr11:7597185-7653351	1	+	7597337	7653218	0	21	188,114,132,93,115,62,76,104,68,58,42,139,142,129,151,112,89,123,126,189,328,	0,374,13105,23749,28591,31099,32273,33739,35681,37309,38366,42546,44293,45112,51201,51614,51961,52346,53654,54470,55838,
#Deleted in new
chr11	7597236	7598481	chr11:7597236-7598481	0	+	7597236	7597236	8553170	2	137,922,	0,323,
#Partially deleted in new
chr11	7597586	7610523	chr11:7597586-7610523	0	+	7597586	7597586	8553170	2	87,233,	0,12704,
#Partially deleted in new
chr11	7605737	7653760	chr11:7605737-7653760	1	+	7605958	7653218	0	20	278,132,93,115,62,76,104,68,58,42,139,142,129,151,112,89,123,126,189,737,	0,4553,15197,20039,22547,23721,25187,27129,28757,29814,33994,35741,36560,42649,43062,43409,43794,45102,45918,47286,
#Partially deleted in new
chr11	7625810	7631243	chr11:7625810-7631243	0	+	7625810	7625810	8553170	4	81,62,76,319,	0,2474,3648,5114,
#Partially deleted in new
chr11	7630922	7642382	chr11:7630922-7642382	0	+	7630922	7642382	789624	8	106,68,58,42,139,33,142,85,	0,1944,3572,4629,8809,10110,10556,11375,
#Partially deleted in new
chr11	7630998	7657127	chr11:7630998-7657127	0	+	7630998	7630998	8553170	16	30,68,58,42,139,142,129,151,112,89,123,126,189,177,66,401,	0,1868,3496,4553,8733,10480,11299,17388,17801,18148,18533,19841,20657,22025,24434,25728,
#Partially deleted in new
chr11	7632345	7639811	chr11:7632345-7639811	0	+	7632345	7632345	8553170	4	589,58,42,80,	0,2149,3206,7386,
#Partially deleted in new
chr11	7632866	7642342	chr11:7632866-7642342	0	+	7632866	7642342	789624	7	68,58,42,139,51,142,45,	0,1628,2685,6865,8166,8612,9431,
#Deleted in new
chr11	7639731	7642156	chr11:7639731-7642156	0	+	7639731	7639731	8553170	2	139,678,	0,1747,
#Partially deleted in new
chr11	7642378	7650896	chr11:7642378-7650896	0	+	7642378	7642378	8553170	6	48,151,112,89,123,38,	0,6008,6421,6768,7153,8480,
#Deleted in new
chr11	7648107	7649172	chr11:7648107-7649172	0	+	7648107	7648107	8553170	3	430,112,26,	0,692,1039,
#Deleted in new
chr11	7649209	7650998	chr11:7649209-7650998	0	+	7649209	7649209	8553170	3	26,123,159,	0,322,1630,
#Deleted in new
chr11	7650748	7653768	chr11:7650748-7653768	0	+	7650748	7650748	8553170	2	1096,745,	0,2275,
#Deleted in new
chr11	7651714	7653756	chr11:7651714-7653756	0	+	7651714	7653642	789624	3	130,177,255,	0,1309,1787,
#Partially deleted in new
chr11	7665099	7673501	chr11:7665099-7673501	1	-	7665373	7672825	789624	9	447,100,86,84,130,107,73,144,83,	0,1351,2628,3378,4105,4525,7351,7648,8319,
#Partially deleted in new
chr11	7665099	7673472	chr11:7665099-7673472	1	-	7665883	7672825	789624	10	447,113,100,86,84,130,107,73,144,54,	0,727,1351,2628,3378,4105,4525,7351,7648,8319,
#Deleted in new
chr11	7665103	7669317	chr11:7665103-7669317	0	-	7665103	7665103	8553170	4	443,86,84,113,	0,2624,3374,4101,
#Partially deleted in new
chr11	7665103	7674208	chr11:7665103-7674208	3	-	7665373	7672825	789624	9	443,100,86,84,130,107,73,144,491,	0,1347,2624,3374,4101,4521,7347,7644,8614,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	7665104	7673455	chr11:7665104-7673455	0	-	7665104	7665104	8553170	3	2709,4046,708,	0,3373,7643,
#Deleted in new
chr11	7665133	7667760	chr11:7665133-7667760	0	-	7665133	7665133	8553170	3	413,113,33,	0,693,2594,
#Deleted in new
chr11	7665281	7666684	chr11:7665281-7666684	0	-	7665281	7665281	8553170	2	265,234,	0,1169,
#Partially deleted in new
chr11	7667542	7672890	chr11:7667542-7672890	0	-	7667542	7667542	8553170	6	271,84,130,107,73,143,	0,935,1662,2082,4908,5205,
#Partially deleted in new
chr11	7667771	7674243	chr11:7667771-7674243	0	-	7667771	7672825	789624	7	42,84,130,107,73,144,292,	0,706,1433,1853,4679,4976,6180,
#Partially deleted in new
chr11	7668511	7674218	chr11:7668511-7674218	0	-	7668511	7672825	789624	6	50,130,107,73,144,107,	0,693,1113,3939,4236,5600,
#Partially deleted in new
chr11	7669018	7672806	chr11:7669018-7672806	0	-	7669018	7669018	8553170	4	316,107,73,59,	0,606,3432,3729,
#Partially deleted in new
chr11	7669243	7673770	chr11:7669243-7673770	0	-	7669243	7672825	789624	5	91,107,73,144,164,	0,381,3207,3504,4363,
#Deleted in new
chr11	7672627	7674211	chr11:7672627-7674211	0	-	7672627	7672627	8553170	2	264,100,	0,1484,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr11	7689437	7706421	chr11:7689437-7706421	3	-	7689954	7706394	789624	16	165,90,132,94,131,141,125,91,24,190,152,96,173,92,110,115,	0,486,1831,2464,5620,6132,7027,7271,9312,10858,11886,12278,12719,14260,15127,16869,
#Partially deleted in new
chr11	7689922	7706394	chr11:7689922-7706394	1	-	7689954	7706394	789624	15	91,132,94,131,141,125,91,24,190,152,96,173,92,110,88,	0,1346,1979,5135,5647,6542,6786,8827,10373,11401,11793,12234,13775,14642,16384,
#Partially deleted in new
chr11	7696504	7696965	chr11:7696504-7696965	0	-	7696504	7696504	8553170	2	85,257,	0,204,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	7698950	7699393	chr11:7698950-7699393	3	-	7698950	7698950	8553170	1	443,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	7699561	7699988	chr11:7699561-7699988	3	-	7699561	7699561	8553170	1	427,	0,
#Partially deleted in new
chr11	7705287	7709517	chr11:7705287-7709517	3	+	7705287	7705287	8553170	3	368,54,117,	0,937,4113,
#Deleted in new
chr11	7726435	7729684	chr11:7726435-7729684	7	+	7726435	7726435	16724991	2	79,1607,	0,1642,
#Deleted in new
chr11	7728399	7729337	chr11:7728399-7729337	5	+	7728399	7728399	16724991	1	938,	0,
#Deleted in new
chr11	7745989	7746906	chr11:7745989-7746906	7	+	7745989	7745989	16724991	1	917,	0,
#Deleted in new
chr11	7772889	7773814	chr11:7772889-7773814	7	-	7772889	7772889	16724991	1	925,	0,
#Partially deleted in new
chr11	7783696	7784407	chr11:7783696-7784407	7	+	7783696	7783696	16724991	1	711,	0,
#Partially deleted in new
chr11	7795904	7796973	chr11:7795904-7796973	3	-	7795973	7796942	789624	1	1069,	0,
#Partially deleted in new
chr11	7824817	7830840	chr11:7824817-7830840	3	-	7825036	7825972	789624	2	1176,17,	0,6006,
#Deleted in new
chr11	7825036	7825972	chr11:7825036-7825972	1	-	7825036	7825972	789624	1	936,	0,
#Deleted in new
chr11	7848699	7849626	chr11:7848699-7849626	7	+	7848699	7848699	16724991	1	927,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	7850750	7905955	chr11:7850750-7905955	3	-	7850750	7850750	789624	8	1574,81,77,165,61,118,74,353,	0,4132,28256,28844,30338,31205,32109,54852,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	7889181	7889279	chr11:7889181-7889279	3	-	7889181	7889181	8553170	1	98,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	7924591	7931268	chr11:7924591-7931268	1	-	7927717	7928662	789624	4	5924,29,27,72,	0,6269,6395,6605,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	7924591	7931268	chr11:7924591-7931268	3	-	7927717	7928662	789624	4	5924,81,27,72,	0,6217,6395,6605,
#Deleted in new
chr11	7927717	7928662	chr11:7927717-7928662	1	-	7927717	7928662	789624	1	945,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	7937170	7941708	chr11:7937170-7941708	3	-	7938575	7939520	789624	2	2528,122,	0,4416,
#Deleted in new
chr11	7938533	7939594	chr11:7938533-7939594	1	-	7938575	7939520	789624	1	1061,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	7959423	7963657	chr11:7959423-7963657	3	-	7959643	7963495	0	2	1899,451,	0,3783,
#Partially deleted in new
chr11	7963298	7965426	chr11:7963298-7965426	0	-	7963298	7963495	789624	2	242,181,	0,1947,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	7970250	8001862	chr11:7970250-8001862	3	+	7987352	7996022	0	10	57,114,819,71,80,138,92,137,114,5918,	0,11419,16647,21530,21833,22636,24175,24731,25003,25694,
#Deleted in new
chr11	7977480	7977708	chr11:7977480-7977708	7	+	7977480	7977480	16724991	1	228,	0,
#Partially deleted in new
chr11	7987319	7996169	chr11:7987319-7996169	1	+	7987352	7996022	0	8	397,71,80,138,92,137,114,225,	0,4461,4764,5567,7106,7662,7934,8625,
#Partially deleted in new
chr11	7987336	7996075	chr11:7987336-7996075	0	+	7987352	7992094	789624	7	380,80,138,92,137,114,131,	0,4747,5550,7089,7645,7917,8608,
#Deleted in new
chr11	7987352	7987965	chr11:7987352-7987965	1	+	7987352	7987965	789624	2	368,4,	0,609,
#Partially deleted in new
chr11	7987355	7992993	chr11:7987355-7992993	0	+	7987355	7987355	8553170	4	361,191,80,107,	0,4425,4728,5531,
#Partially deleted in new
chr11	7991821	7992998	chr11:7991821-7992998	0	+	7991821	7991821	8553170	2	342,112,	0,1065,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	7992126	7996169	chr11:7992126-7996169	0	+	7992126	7992126	8553170	4	304,526,92,1188,	0,372,2299,2855,
#Deleted in new
chr11	7994697	7996018	chr11:7994697-7996018	0	+	7994697	7994697	8553170	3	421,114,74,	0,556,1247,
#Deleted in new
chr11	7995013	7995633	chr11:7995013-7995633	0	+	7995013	7995451	789624	2	105,380,	0,240,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	8011277	8016489	chr11:8011277-8016489	3	-	8011277	8011277	789624	3	991,157,415,	0,2296,4797,
#Partially deleted in new
chr11	8019243	8101780	chr11:8019243-8101780	1	+	8019302	8101619	789624	12	115,52,163,144,168,122,198,113,118,99,172,295,	0,70366,70825,74802,76254,77441,77984,78470,79514,81259,81582,82242,
#Deleted in new
chr11	8035445	8039718	chr11:8035445-8039718	3	-	8035445	8035445	8553170	2	613,202,	0,4071,
#Deleted in new
chr11	8038588	8039699	chr11:8038588-8039699	1	-	8038588	8038588	8553170	2	414,183,	0,928,
#Partially deleted in new
chr11	8038632	8106112	chr11:8038632-8106112	3	+	8038873	8101619	0	13	396,48,52,163,144,168,122,198,113,118,99,172,4627,	0,1012,50977,51436,55413,56865,58052,58595,59081,60125,61870,62193,62853,
#Partially deleted in new
chr11	8060037	8069373	chr11:8060037-8069373	3	+	8060037	8060037	789624	4	41,159,57,1764,	0,2035,7385,7572,
#Partially deleted in new
chr11	8060037	8067940	chr11:8060037-8067940	0	+	8060037	8060037	789624	3	41,159,331,	0,2035,7572,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	8075572	8077781	chr11:8075572-8077781	3	-	8075572	8075572	8553170	1	2209,	0,
#Partially deleted in new
chr11	8081361	8101968	chr11:8081361-8101968	1	+	8081510	8101619	0	12	187,52,163,144,168,122,198,113,118,99,172,483,	0,8248,8707,12684,14136,15323,15866,16352,17396,19141,19464,20124,
#Partially deleted in new
chr11	8106092	8169043	chr11:8106092-8169043	1	-	8110697	8168989	789624	2	5045,178,	0,62773,
#Partially deleted in new
chr11	8108941	8169055	chr11:8108941-8169055	3	-	8110697	8168989	789624	6	2196,146,94,76,227,190,	0,17717,28436,29330,31025,59924,
#Partially deleted in new
chr11	8108948	8168989	chr11:8108948-8168989	1	-	8110697	8168989	789624	6	2189,149,94,76,227,124,	0,17710,28429,29323,31018,59917,
#Partially deleted in new
chr11	8109435	8169040	chr11:8109435-8169040	0	-	8126790	8168989	789624	3	1702,146,175,	0,17223,59430,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	8110243	8138559	chr11:8110243-8138559	0	-	8110243	8110243	8553170	5	164,479,146,94,288,	0,415,16415,27134,28028,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	8110469	8138778	chr11:8110469-8138778	0	-	8110469	8110469	8553170	5	668,146,136,94,507,	0,16189,17749,26908,27802,
#Partially deleted in new
chr11	8110664	8169008	chr11:8110664-8169008	0	-	8153415	8168989	789624	7	473,149,94,76,227,49,143,	0,15994,26713,27607,29302,42710,58201,
#Partially deleted in new
chr11	8110697	8168989	chr11:8110697-8168989	1	-	8110697	8168989	789624	4	440,76,227,124,	0,27574,29269,58168,
#Partially deleted in new
chr11	8110906	8169021	chr11:8110906-8169021	0	-	8110906	8168989	789624	6	231,233,94,76,227,156,	0,15752,26471,27365,29060,57959,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	8135581	8138425	chr11:8135581-8138425	0	-	8135581	8135581	8553170	3	263,94,154,	0,1796,2690,
#Partially deleted in new
chr11	8135786	8140186	chr11:8135786-8140186	0	-	8135786	8135786	8553170	4	58,94,76,220,	0,1591,2485,4180,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	8139053	8169025	chr11:8139053-8169025	1	-	8139930	8168989	789624	2	1140,160,	0,29812,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	8169166	8178903	chr11:8169166-8178903	3	+	8169166	8169166	8553170	3	23,104,3607,	0,718,6130,
#Partially deleted in new
chr11	8224303	8263858	chr11:8224303-8263858	3	-	8224615	8263362	789624	4	418,126,214,521,	0,2671,5987,39034,
#Partially deleted in new
chr11	8224313	8268716	chr11:8224313-8268716	1	-	8224615	8268448	789624	4	408,126,214,290,	0,2661,5977,44113,
#Partially deleted in new
chr11	8224448	8263388	chr11:8224448-8263388	0	-	8224448	8224448	8553170	4	273,247,214,51,	0,2405,5842,38889,
#Partially deleted in new
chr11	8224478	8263858	chr11:8224478-8263858	1	-	8224615	8230496	789624	4	243,126,214,187,	0,2496,5812,39193,
#Partially deleted in new
chr11	8391867	8452906	chr11:8391867-8452906	0	-	8391867	8391867	8553170	5	843,198,86,113,85,	0,21627,43626,44159,60954,
#Partially deleted in new
chr11	8391870	8593956	chr11:8391870-8593956	1	-	8392509	8474905	789624	14	840,198,86,113,76,85,89,139,105,114,114,386,149,213,	0,21624,43623,44156,48807,60951,62873,65470,69934,72838,81292,82810,141477,201873,
#Partially deleted in new
chr11	8391870	8594228	chr11:8391870-8594228	1	-	8392509	8457476	789624	11	840,198,86,113,76,85,89,139,105,114,146,	0,21624,43623,44156,48807,60951,62873,65470,69934,72838,202212,
#Partially deleted in new
chr11	8391870	8593956	chr11:8391870-8593956	3	-	8392509	8474905	789624	13	840,198,86,113,76,85,89,139,105,114,114,386,213,	0,21624,43623,44156,48807,60951,62873,65470,69934,72838,81292,82810,201873,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	8391870	8475824	chr11:8391870-8475824	1	-	8392509	8474905	789624	12	840,198,86,113,76,85,89,139,105,114,114,1144,	0,21624,43623,44156,48807,60951,62873,65470,69934,72838,81292,82810,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	8391870	8467654	chr11:8391870-8467654	0	-	8391870	8391870	8553170	10	840,198,86,113,76,85,89,139,105,2946,	0,21624,43623,44156,48807,60951,62873,65470,69934,72838,
#Partially deleted in new
chr11	8391878	8454794	chr11:8391878-8454794	0	-	8392509	8454794	789624	6	832,86,113,76,85,51,	0,43615,44148,48799,60943,62865,
#Partially deleted in new
chr11	8392186	8594155	chr11:8392186-8594155	1	-	8392509	8474782	789624	14	524,198,86,113,76,85,89,139,105,114,114,136,43,73,	0,21308,43307,43840,48491,60635,62557,65154,69618,72522,80976,82494,175064,201896,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	8433859	8594259	chr11:8433859-8594259	0	-	8433859	8433859	8553170	6	384,86,113,76,85,177,	0,1634,2167,6818,18962,160223,
#Partially deleted in new
chr11	8440725	8474755	chr11:8440725-8474755	0	-	8440725	8474755	789624	7	28,85,89,139,105,114,75,	0,12096,14018,16615,21079,32437,33955,
#Partially deleted in new
chr11	8454759	8594008	chr11:8454759-8594008	0	-	8454759	8474782	789624	7	73,139,105,114,114,136,265,	0,2581,7045,9949,18403,19921,138984,
#Partially deleted in new
chr11	8457340	8594160	chr11:8457340-8594160	0	-	8457340	8474782	789624	7	139,105,114,114,136,81,78,	0,4464,7368,15822,17340,23193,136742,
#Partially deleted in new
chr11	8461848	8477283	chr11:8461848-8477283	0	-	8461848	8474905	789624	5	61,114,114,386,34,	0,2860,11314,12832,15401,
#Partially deleted in new
chr11	8474647	8593985	chr11:8474647-8593985	0	-	8474647	8474647	8553170	3	419,147,242,	0,106166,119096,
#Partially deleted in new
chr11	8474714	8593969	chr11:8474714-8593969	0	-	8474714	8474905	789624	5	352,65,34,81,226,	0,1972,2535,5819,119029,
#Partially deleted in new
chr11	8474792	8594289	chr11:8474792-8594289	0	-	8474792	8474905	789624	3	274,81,207,	0,5741,119290,
#Partially deleted in new
chr11	8474818	8565911	chr11:8474818-8565911	0	-	8474818	8474905	789624	3	248,132,202,	0,5664,90891,
#Deleted in new
chr11	8555015	8555146	chr11:8555015-8555146	3	+	8555015	8555015	8553170	1	131,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr11	8612036	8658836	chr11:8612036-8658836	1	-	8617943	8651808	789624	20	5967,219,153,75,127,290,175,61,96,520,162,926,118,147,115,117,133,148,104,100,	0,6713,7346,8013,8409,8995,9608,10779,12322,12672,26617,28190,30972,33704,34410,35933,36379,37703,39763,46700,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr11	8612036	8671866	chr11:8612036-8671866	1	-	8617943	8651808	789624	22	5967,219,153,75,127,290,175,61,193,516,162,926,118,147,115,111,133,148,104,145,120,81,	0,6713,7346,8013,8409,8995,9608,10779,12322,12676,26617,28190,30972,33704,34410,35933,36379,37703,39763,42397,51092,59749,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr11	8612039	8682658	chr11:8612039-8682658	3	-	8617943	8672274	789624	25	5964,219,153,75,127,290,175,61,193,516,162,926,118,147,115,117,133,148,104,313,138,78,195,163,58,	0,6710,7343,8010,8406,8992,9605,10776,12319,12673,26614,28187,30969,33701,34407,35930,36376,37700,39760,59746,60208,62766,67580,67861,70561,
#Partially deleted in new
chr11	8615538	8658836	chr11:8615538-8658836	0	-	8615538	8615538	8553170	19	2465,219,153,75,127,290,175,61,870,162,926,118,147,115,117,133,148,104,100,	0,3211,3844,4511,4907,5493,6106,7277,8820,23115,24688,27470,30202,30908,32431,32877,34201,36261,43198,
#Deleted in new
chr11	8617568	8619284	chr11:8617568-8619284	0	-	8617568	8617568	8553170	2	435,535,	0,1181,
#Deleted in new
chr11	8617763	8621043	chr11:8617763-8621043	0	-	8617763	8617763	8553170	6	240,247,153,75,127,12,	0,958,1619,2286,2682,3268,
#Partially deleted in new
chr11	8618876	8622845	chr11:8618876-8622845	0	-	8618876	8622845	789624	7	92,153,75,127,206,175,30,	0,506,1173,1569,2155,2768,3939,
#Partially deleted in new
chr11	8644329	8671866	chr11:8644329-8671866	0	-	8644329	8644329	8553170	10	100,147,115,117,133,148,104,145,120,81,	0,1411,2117,3640,4086,5410,7470,10104,18799,27456,
#Deleted in new
chr11	8645721	8648066	chr11:8645721-8648066	0	-	8645721	8645721	8553170	3	166,115,97,	0,725,2248,
#Deleted in new
chr11	8679088	8680913	chr11:8679088-8680913	3	+	8679088	8679088	8553170	2	290,247,	0,1578,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	8682410	8689872	chr11:8682410-8689872	3	+	8682813	8685806	0	5	406,64,76,175,4195,	0,791,1595,2307,3267,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	8682787	8683779	chr11:8682787-8683779	0	+	8682787	8682787	8553170	2	29,578,	0,414,
#Partially deleted in new
chr11	8682787	8684489	chr11:8682787-8684489	0	+	8682787	8682787	8553170	3	29,64,484,	0,414,1218,
#Partially deleted in new
chr11	8682787	8685415	chr11:8682787-8685415	1	+	8682813	8684901	789624	4	29,64,76,698,	0,414,1218,1930,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	8682788	8685847	chr11:8682788-8685847	1	+	8684745	8685806	789624	5	28,64,121,175,170,	0,413,1172,1929,2889,
#Partially deleted in new
chr11	8682791	8685848	chr11:8682791-8685848	1	+	8682813	8685806	789624	5	25,64,76,70,171,	0,410,1214,2031,2886,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	8682791	8685845	chr11:8682791-8685845	0	+	8682813	8683921	789624	5	25,64,219,175,168,	0,410,1071,1926,2886,
#Partially deleted in new
chr11	8682809	8685848	chr11:8682809-8685848	1	+	8684745	8685806	789624	4	456,76,175,171,	0,1196,1908,2868,
#Partially deleted in new
chr11	8683200	8685848	chr11:8683200-8685848	1	+	8684745	8685806	789624	4	65,76,207,171,	0,805,1485,2477,
#Partially deleted in new
chr11	8683214	8685847	chr11:8683214-8685847	0	+	8683214	8685678	789624	3	51,76,170,	0,791,2463,
#Deleted in new
chr11	8684226	8684356	chr11:8684226-8684356	3	+	8684226	8684226	5263520	1	130,	0,
#Deleted in new
chr11	8684258	8685848	chr11:8684258-8685848	1	+	8684745	8685806	789624	2	634,171,	0,1419,
#Deleted in new
chr11	8685438	8685569	chr11:8685438-8685569	3	+	8685438	8685438	5263520	1	131,	0,
#Partially deleted in new
chr11	8689129	8714759	chr11:8689129-8714759	0	+	8689129	8689129	8553170	2	174,76,	0,25554,
#Partially deleted in new
chr11	8693350	8811341	chr11:8693350-8811341	1	-	8694095	8750700	789624	19	780,87,240,112,42,178,149,141,78,70,110,185,45,97,216,152,137,105,95,	0,2112,3076,4174,5582,5862,9221,13734,14426,17494,17771,19200,20647,21259,22252,24390,32722,57270,117896,
#Partially deleted in new
chr11	8693350	8910951	chr11:8693350-8910951	3	-	8694095	8750700	789624	23	780,87,240,112,42,178,149,141,78,70,110,185,45,97,216,152,137,1260,105,89,41,100,131,	0,2112,3076,4174,5582,5862,9221,13734,14426,17494,17771,19200,20647,21259,22252,24390,32722,36599,57270,117896,145959,187659,217470,
#Partially deleted in new
chr11	8693351	8810840	chr11:8693351-8810840	1	-	8694095	8750700	789624	20	779,87,240,112,42,178,149,141,78,70,110,185,45,97,216,152,137,1260,105,324,	0,2111,3075,4173,5581,5861,9220,13733,14425,17493,17770,19199,20646,21258,22251,24389,32721,36598,57269,117165,
#Partially deleted in new
chr11	8693352	8719143	chr11:8693352-8719143	1	-	8694095	8717785	789624	17	778,87,240,112,42,178,149,141,78,70,110,185,45,97,216,152,716,	0,2110,3074,4172,5580,5860,9219,13732,14424,17492,17769,19198,20645,21257,22250,24388,25075,
#Partially deleted in new
chr11	8693356	8696607	chr11:8693356-8696607	3	+	8693356	8693356	8553170	2	604,140,	0,3111,
#Partially deleted in new
chr11	8693747	8718477	chr11:8693747-8718477	1	-	8694095	8718374	789624	17	383,87,240,112,42,178,149,141,78,70,110,185,45,97,216,152,119,	0,1715,2679,3777,5185,5465,8824,13337,14029,17097,17374,18803,20250,20862,21855,23993,24611,
#Deleted in new
chr11	8693872	8694655	chr11:8693872-8694655	0	-	8693872	8693872	8553170	2	258,109,	0,674,
#Partially deleted in new
chr11	8693888	8699020	chr11:8693888-8699020	0	-	8693888	8693888	8553170	5	242,87,240,112,88,	0,1574,2538,3636,5044,
#Partially deleted in new
chr11	8693898	8708081	chr11:8693898-8708081	1	-	8694095	8707913	789624	9	232,87,240,112,42,178,149,141,171,	0,1564,2528,3626,5034,5314,8673,13186,14012,
#Partially deleted in new
chr11	8694061	8695995	chr11:8694061-8695995	0	-	8694061	8694061	8553170	2	69,533,	0,1401,
#Partially deleted in new
chr11	8694095	8811016	chr11:8694095-8811016	1	-	8694095	8750700	789624	19	35,87,240,112,42,178,149,141,78,70,110,185,45,97,216,152,137,105,500,	0,1367,2331,3429,4837,5117,8476,12989,13681,16749,17026,18455,19902,20514,21507,23645,31977,56525,116421,
#Partially deleted in new
chr11	8696435	8697773	chr11:8696435-8697773	0	-	8696435	8696435	8553170	2	231,249,	0,1089,
#Partially deleted in new
chr11	8696464	8702657	chr11:8696464-8702657	0	-	8699298	8702657	789624	6	202,112,42,178,156,86,	0,1060,2468,2748,3392,6107,
#Partially deleted in new
chr11	8697575	8707266	chr11:8697575-8707266	0	-	8697575	8697575	8553170	4	61,42,178,182,	0,1357,1637,9509,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	8697923	8707225	chr11:8697923-8707225	0	-	8697923	8697923	8553170	5	41,42,178,149,141,	0,1009,1289,4648,9161,
#Partially deleted in new
chr11	8699965	8711185	chr11:8699965-8711185	0	-	8699965	8699965	8553170	6	47,1040,141,78,70,64,	0,2606,7119,7811,10879,11156,
#Deleted in new
chr11	8702569	8702856	chr11:8702569-8702856	0	-	8702569	8702569	8553170	2	151,39,	0,248,
#Partially deleted in new
chr11	8702571	8715830	chr11:8702571-8715830	0	-	8702571	8702571	8553170	6	149,141,78,45,97,228,	0,4513,5205,11426,12038,13031,
#Partially deleted in new
chr11	8702673	8718060	chr11:8702673-8718060	0	-	8702673	8717785	789624	10	47,141,78,70,110,185,45,97,216,320,	0,4411,5103,8171,8448,9877,11324,11936,12929,15067,
#Partially deleted in new
chr11	8703398	8711185	chr11:8703398-8711185	0	-	8703398	8703398	8553170	5	213,141,78,70,64,	0,3686,4378,7446,7723,
#Partially deleted in new
chr11	8707102	8712720	chr11:8707102-8712720	0	-	8710937	8712720	789624	5	123,78,113,106,170,	0,674,3742,4023,5448,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	8707205	8766704	chr11:8707205-8766704	0	-	8711967	8766701	789624	13	20,78,66,110,133,185,45,97,216,152,137,105,68,	0,571,3639,3916,4698,5345,6792,7404,8397,10535,18867,43415,59431,
#Partially deleted in new
chr11	8711121	8726174	chr11:8711121-8726174	0	-	8711121	8717785	789624	6	110,185,97,216,152,102,	0,1429,3488,4481,6619,14951,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	8711967	8766701	chr11:8711967-8766701	1	-	8711967	8766701	789624	9	69,185,45,97,216,152,137,105,65,	0,583,2030,2642,3635,5773,14105,38653,54669,
#Partially deleted in new
chr11	8712599	8810673	chr11:8712599-8810673	0	-	8712599	8717785	789624	7	136,45,97,216,152,137,157,	0,1398,2010,3003,5141,13473,97917,
#Partially deleted in new
chr11	8715462	8717836	chr11:8715462-8717836	0	-	8715476	8717836	789624	2	356,96,	0,2278,
#Partially deleted in new
chr11	8715643	8810685	chr11:8715643-8810685	0	-	8715643	8715643	8553170	5	29,152,137,105,169,	0,2097,10429,34977,94873,
#Partially deleted in new
chr11	8715722	8871079	chr11:8715722-8871079	0	-	8715722	8717785	789624	5	96,152,137,89,126,	0,2018,10350,95524,155231,
#Partially deleted in new
chr11	8715741	8774245	chr11:8715741-8774245	0	-	8715741	8750700	789624	5	77,152,137,105,124,	0,1999,10331,34879,58380,
#Partially deleted in new
chr11	8715754	8810649	chr11:8715754-8810649	0	-	8715754	8750700	789624	5	44,152,137,105,133,	0,1986,10318,34866,94762,
#Partially deleted in new
chr11	8715780	8794842	chr11:8715780-8794842	0	-	8715780	8750700	789624	5	38,152,137,105,156,	0,1960,10292,34840,78906,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	8717793	8871416	chr11:8717793-8871416	0	-	8717793	8717793	8553170	6	99,137,89,133,41,83,	0,8279,93453,113762,121516,153540,
#Partially deleted in new
chr11	8717831	8726319	chr11:8717831-8726319	0	-	8717831	8717831	8553170	2	61,247,	0,8241,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	8717878	8771919	chr11:8717878-8771919	0	-	8717878	8750700	789624	4	14,137,105,246,	0,8194,32742,53795,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	8717881	8835711	chr11:8717881-8835711	0	-	8717881	8750700	789624	6	11,137,105,89,133,108,	0,8191,32739,93365,113674,117722,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	8726072	8871007	chr11:8726072-8871007	0	-	8726072	8750700	789624	6	137,105,89,133,41,54,	0,24548,85174,105483,113237,144881,
#Partially deleted in new
chr11	8730304	8766670	chr11:8730304-8766670	0	-	8730304	8730304	8553170	4	316,87,105,34,	0,818,20316,36332,
#Partially deleted in new
chr11	8730807	8835667	chr11:8730807-8835667	0	-	8730807	8730807	8553170	3	402,89,44,	0,80439,104816,
#Partially deleted in new
chr11	8730827	8810685	chr11:8730827-8810685	0	-	8730827	8750700	789624	3	382,105,73,	0,19793,79785,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	8730830	8766712	chr11:8730830-8766712	0	-	8730830	8766701	789624	3	379,105,76,	0,19790,35806,
#Partially deleted in new
chr11	8730841	8810747	chr11:8730841-8810747	0	-	8730841	8730841	8553170	2	368,231,	0,79675,
#Partially deleted in new
chr11	8730856	8774301	chr11:8730856-8774301	0	-	8730856	8750700	789624	3	353,105,180,	0,19764,43265,
#Partially deleted in new
chr11	8730863	8870984	chr11:8730863-8870984	0	-	8730863	8750700	789624	4	346,105,41,31,	0,19757,108446,140090,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	8730870	8835708	chr11:8730870-8835708	0	-	8730870	8750700	789624	5	339,105,89,133,85,	0,19750,80376,100685,104753,
#Partially deleted in new
chr11	8730874	8757152	chr11:8730874-8757152	0	-	8730874	8757071	789624	3	335,105,107,	0,19746,26171,
#Partially deleted in new
chr11	8730916	8871353	chr11:8730916-8871353	0	-	8730916	8750700	789624	4	293,105,89,400,	0,19704,80330,140037,
#Partially deleted in new
chr11	8730921	8835705	chr11:8730921-8835705	0	-	8730921	8750700	789624	4	288,105,89,82,	0,19699,80325,104702,
#Partially deleted in new
chr11	8730954	8870917	chr11:8730954-8870917	0	-	8730954	8750700	789624	5	255,105,89,41,83,	0,19666,80292,108355,139880,
#Partially deleted in new
chr11	8730980	8776679	chr11:8730980-8776679	0	-	8730980	8776226	789624	3	229,105,488,	0,19640,45211,
#Partially deleted in new
chr11	8731004	8871389	chr11:8731004-8871389	0	-	8731004	8750700	789624	6	205,105,89,41,135,56,	0,19616,80242,108305,139949,140329,
#Partially deleted in new
chr11	8731039	8811566	chr11:8731039-8811566	0	-	8731039	8750700	789624	4	170,105,89,150,	0,19581,80207,80377,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	8731067	8871066	chr11:8731067-8871066	0	-	8731067	8750700	789624	5	142,105,133,41,113,	0,19553,100488,108242,139886,
#Partially deleted in new
chr11	8731067	8871418	chr11:8731067-8871418	0	-	8731067	8750700	789624	5	142,105,89,135,85,	0,19553,80179,139886,140266,
#Partially deleted in new
chr11	8731117	8871367	chr11:8731117-8871367	0	-	8731117	8750700	789624	7	92,105,89,41,94,135,34,	0,19503,80129,108192,126225,139836,140216,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	8731129	8871367	chr11:8731129-8871367	0	-	8731129	8750700	789624	6	80,105,89,133,135,34,	0,19491,80117,100426,139824,140204,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	8731132	8831939	chr11:8731132-8831939	0	-	8731132	8750700	789624	5	77,105,89,133,146,	0,19488,80114,100423,100661,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	8731169	8871370	chr11:8731169-8871370	0	-	8731169	8750700	789624	7	40,105,89,133,41,135,37,	0,19451,80077,100386,108140,139784,140164,
#Partially deleted in new
chr11	8731199	8871367	chr11:8731199-8871367	0	-	8731199	8750700	789624	5	10,105,89,41,414,	0,19421,80047,108110,139754,
#Partially deleted in new
chr11	8750620	8835708	chr11:8750620-8835708	0	-	8750620	8750700	789624	3	105,89,105,	0,60626,84983,
#Partially deleted in new
chr11	8768777	8785771	chr11:8768777-8785771	1	+	8768777	8768777	8553170	3	44,190,616,	0,15241,16378,
#Partially deleted in new
chr11	8784540	8810229	chr11:8784540-8810229	3	+	8784540	8784540	8553170	3	17,307,153,	0,615,25536,
#Partially deleted in new
chr11	8785400	8810231	chr11:8785400-8810231	0	+	8785400	8785400	8553170	3	62,233,155,	0,1653,24676,
#Deleted in new
chr11	8807825	8811580	chr11:8807825-8811580	0	-	8807825	8807825	8553170	2	3510,164,	0,3591,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	8811282	8909911	chr11:8811282-8909911	0	-	8811282	8811282	8553170	6	49,133,41,100,48,165,	0,20273,28027,69727,84251,98464,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	8830700	8832587	chr11:8830700-8832587	0	-	8830700	8830700	8553170	3	174,133,26,	0,855,1861,
#Partially deleted in new
chr11	8845262	8845358	chr11:8845262-8845358	7	+	8845262	8845262	16724991	1	96,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	8877416	8877518	chr11:8877416-8877518	3	-	8877416	8877416	8553170	1	102,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	8911138	8920084	chr11:8911138-8920084	1	+	8911449	8919480	789624	5	85,228,105,81,748,	0,305,3687,6148,8198,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	8911139	8920084	chr11:8911139-8920084	3	+	8911449	8919480	789624	6	84,228,81,105,81,748,	0,304,1313,3686,6147,8197,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	8911153	8920084	chr11:8911153-8920084	1	+	8911449	8919480	789624	5	70,228,81,105,748,	0,290,1299,3672,8183,
#Partially deleted in new
chr11	8911188	8918119	chr11:8911188-8918119	1	+	8911449	8917466	789624	3	483,105,833,	0,3637,6098,
#Partially deleted in new
chr11	8911191	8917748	chr11:8911191-8917748	1	+	8911449	8917466	789624	4	480,81,105,462,	0,1261,3634,6095,
#Partially deleted in new
chr11	8911198	8917416	chr11:8911198-8917416	0	+	8911449	8917416	789624	5	25,228,81,105,130,	0,245,1254,3627,6088,
#Partially deleted in new
chr11	8911198	8917504	chr11:8911198-8917504	1	+	8911449	8917466	789624	4	25,228,105,218,	0,245,3627,6088,
#Partially deleted in new
chr11	8911287	8919414	chr11:8911287-8919414	0	+	8912494	8919414	789624	6	67,57,81,105,81,78,	0,327,1165,3538,5999,8049,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	8911337	8919900	chr11:8911337-8919900	1	+	8911449	8919480	789624	4	334,105,81,564,	0,3488,5949,7999,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	8911442	8919862	chr11:8911442-8919862	1	+	8911449	8919480	789624	5	229,81,105,81,526,	0,1010,3383,5844,7894,
#Partially deleted in new
chr11	8911464	8919537	chr11:8911464-8919537	0	+	8911464	8919480	789624	3	207,105,201,	0,3361,7872,
#Partially deleted in new
chr11	8920075	8932989	chr11:8920075-8932989	3	-	8921315	8932308	789624	7	375,222,645,235,157,185,89,	0,1218,5387,6864,9301,12066,12825,
#Partially deleted in new
chr11	8920075	8932988	chr11:8920075-8932988	1	-	8920439	8932308	789624	6	375,645,235,157,185,88,	0,5387,6864,9301,12066,12825,
#Partially deleted in new
chr11	8927099	8932947	chr11:8927099-8932947	0	-	8927099	8927099	8553170	5	75,206,52,185,47,	0,403,2277,5042,5801,
#Partially deleted in new
chr11	8927153	8932950	chr11:8927153-8932950	0	-	8927619	8932308	789624	5	21,180,157,185,50,	0,349,2223,4988,5747,
#Partially deleted in new
chr11	8927570	8932983	chr11:8927570-8932983	0	-	8927570	8927570	8553170	4	138,157,185,83,	0,1806,4571,5330,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	8928900	8933006	chr11:8928900-8933006	0	-	8928900	8928900	8553170	3	633,185,106,	0,3241,4000,
#Deleted in new
chr11	8937578	8938211	chr11:8937578-8938211	3	-	8937615	8938161	789624	1	633,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	8943379	8943467	chr11:8943379-8943467	3	-	8943379	8943379	8553170	1	88,	0,
#Partially deleted in new
chr11	8947293	8964441	chr11:8947293-8964441	1	-	8948319	8956273	789624	4	1182,135,109,233,	0,5909,8896,16915,
#Partially deleted in new
chr11	8947293	8964773	chr11:8947293-8964773	3	-	8948319	8964313	789624	5	1182,135,109,92,565,	0,5909,8896,14798,16915,
#Partially deleted in new
chr11	8947500	8965011	chr11:8947500-8965011	1	-	8948319	8956273	789624	5	975,135,109,92,122,	0,5702,8689,14591,17389,
#Partially deleted in new
chr11	8952691	8964402	chr11:8952691-8964402	1	-	8953133	8956273	789624	3	646,109,194,	0,3498,11517,
#Partially deleted in new
chr11	8953261	8964180	chr11:8953261-8964180	0	-	8953261	8956273	789624	5	76,109,92,158,190,	0,2928,8830,9433,10729,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	8964674	8976283	chr11:8964674-8976283	3	+	8964674	8964674	789624	5	474,141,116,203,119,	0,1229,1866,3164,11490,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	8965047	8977472	chr11:8965047-8977472	0	+	8965047	8965047	8553170	5	101,141,116,203,54,	0,856,1493,2791,12371,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	8966579	8977527	chr11:8966579-8977527	0	+	8966579	8966579	8553170	3	77,203,103,	0,1259,10845,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	8980575	9004049	chr11:8980575-9004049	3	-	8983544	9003935	789624	7	2985,95,53,140,83,165,288,	0,3299,3496,5135,6972,7542,23186,
#Deleted in new
chr11	8982558	8984103	chr11:8982558-8984103	0	-	8982958	8984103	789624	3	440,95,32,	0,1316,1513,
#Partially deleted in new
chr11	8983517	8985756	chr11:8983517-8985756	0	-	8983870	8985756	789624	3	452,53,46,	0,554,2193,
#Partially deleted in new
chr11	8983578	9004049	chr11:8983578-9004049	1	-	8984120	9003935	789624	5	391,53,83,165,288,	0,493,3969,4539,20183,
#Partially deleted in new
chr11	8985770	9004001	chr11:8985770-9004001	0	-	8985770	9003935	789624	4	80,83,144,240,	0,1777,2347,17991,
#Partially deleted in new
chr11	9004161	9057284	chr11:9004161-9057284	3	+	9004161	9004161	8553170	3	382,132,46,	0,26045,53077,
#Partially deleted in new
chr11	9019497	9091546	chr11:9019497-9091546	1	-	9021044	9091528	8553170	23	1700,80,153,198,162,168,171,207,156,105,87,117,123,117,123,117,90,117,126,135,126,123,151,	0,2378,6204,7866,10386,11260,14128,27858,28445,31108,33248,33601,34139,36295,39805,40910,46393,47199,49872,54983,59886,70209,71898,
#Partially deleted in new
chr11	9020390	9091601	chr11:9020390-9091601	1	-	9021044	9091528	789624	22	807,80,153,198,162,168,171,207,156,105,117,123,117,123,117,90,117,126,135,126,123,206,	0,1485,5311,6973,9493,10367,13235,26965,27552,30215,32708,33246,35402,38912,40017,45500,46306,48979,54090,58993,69316,71005,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	9020444	9027190	chr11:9020444-9027190	0	-	9020444	9020444	8553170	3	753,80,1489,	0,1431,5257,
#Partially deleted in new
chr11	9020574	9091546	chr11:9020574-9091546	1	-	9021044	9091528	789624	18	623,80,153,162,168,171,207,123,117,123,117,90,117,126,135,126,123,151,	0,1301,5127,9309,10183,13051,26781,33062,35218,38728,39833,45316,46122,48795,53906,58809,69132,70821,
#Partially deleted in new
chr11	9020883	9091599	chr11:9020883-9091599	3	-	9021044	9091528	789624	22	314,80,153,198,162,168,207,156,105,87,117,123,117,123,117,90,117,126,135,126,123,204,	0,992,4818,6480,9000,9874,26472,27059,29722,31862,32215,32753,34909,38419,39524,45007,45813,48486,53597,58500,68823,70512,
#Deleted in new
chr11	9020889	9022029	chr11:9020889-9022029	0	-	9020889	9020889	8553170	2	308,154,	0,986,
#Partially deleted in new
chr11	9022551	9025821	chr11:9022551-9025821	0	-	9022551	9022551	8553170	2	205,120,	0,3150,
#Partially deleted in new
chr11	9024206	9027539	chr11:9024206-9027539	0	-	9024405	9027539	789624	3	207,153,176,	0,1495,3157,
#Partially deleted in new
chr11	9025479	9027525	chr11:9025479-9027525	0	-	9025657	9027525	789624	2	375,162,	0,1884,
#Partially deleted in new
chr11	9027488	9031260	chr11:9027488-9031260	0	-	9027488	9027488	8553170	3	73,162,503,	0,2395,3269,
#Partially deleted in new
chr11	9048072	9050397	chr11:9048072-9050397	0	-	9048072	9048072	8553170	2	26,499,	0,1826,
#Partially deleted in new
chr11	9053138	9065911	chr11:9053138-9065911	0	-	9053138	9065911	789624	6	74,123,117,123,117,21,	0,498,2654,6164,7269,12752,
#Partially deleted in new
chr11	9053202	9066750	chr11:9053202-9066750	0	-	9053202	9066750	789624	6	13,117,123,117,90,54,	0,2590,6100,7205,12688,13494,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	9057250	9065154	chr11:9057250-9065154	1	+	9057250	9057250	8553170	3	205,132,623,	0,2357,7281,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	9079470	9138114	chr11:9079470-9138114	0	-	9079470	9079470	8553170	4	39,123,123,284,	0,10236,43301,58360,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	9090311	9090379	chr11:9090311-9090379	3	-	9090311	9090311	5263520	1	68,	0,
#Deleted in new
chr11	9094376	9095890	chr11:9094376-9095890	7	+	9094376	9094376	16724991	1	1514,	0,
#Partially deleted in new
chr11	9138824	9265390	chr11:9138824-9265390	3	-	9139670	9265069	789624	23	1030,169,124,83,182,119,146,122,129,85,85,153,132,94,151,235,216,318,188,658,110,72,430,	0,3115,3897,4578,5272,6170,6845,8205,11256,11855,13533,21888,27011,31031,31802,39307,40033,41942,54669,64835,67848,68736,126136,
#Partially deleted in new
chr11	9138829	9145460	chr11:9138829-9145460	0	-	9138829	9138829	8553170	5	1025,169,764,182,466,	0,3110,3892,5267,6165,
#Partially deleted in new
chr11	9139458	9265087	chr11:9139458-9265087	1	-	9139774	9265069	789624	23	396,135,124,83,182,119,146,122,129,85,85,153,132,94,151,235,216,318,188,658,110,72,127,	0,2515,3263,3944,4638,5536,6211,7571,10622,11221,12899,21254,26377,30397,31168,38673,39399,41308,54035,64201,67214,68102,125502,
#Partially deleted in new
chr11	9139502	9144179	chr11:9139502-9144179	0	-	9139670	9144179	789624	4	352,169,124,83,	0,2437,3219,4594,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr11	9139503	9172245	chr11:9139503-9172245	0	-	9139503	9139503	8553170	15	351,169,124,83,182,119,146,122,129,85,85,153,132,94,1619,	0,2436,3218,3899,4593,5491,6166,7526,10577,11176,12854,21209,26332,30352,31123,
#Partially deleted in new
chr11	9139514	9143452	chr11:9139514-9143452	0	-	9139670	9143452	789624	5	340,60,169,124,50,	0,674,2425,3207,3888,
#Partially deleted in new
chr11	9139688	9145815	chr11:9139688-9145815	0	-	9139688	9145815	789624	5	166,169,182,119,146,	0,2251,4408,5306,5981,
#Partially deleted in new
chr11	9141940	9150173	chr11:9141940-9150173	0	-	9145718	9150173	789624	7	168,124,83,182,119,146,93,	0,781,1462,2156,3054,3729,8140,
#Deleted in new
chr11	9145061	9152407	chr11:9145061-9152407	0	-	9145061	9152407	789624	6	52,146,122,129,67,50,	0,608,1968,5019,5618,7296,
#Partially deleted in new
chr11	9145712	9265127	chr11:9145712-9265127	0	-	9150704	9265069	789624	15	103,122,129,85,153,132,94,151,235,216,318,188,658,110,167,	0,1317,4368,4967,15000,20123,24143,24914,32419,33145,35054,47781,57947,60960,119248,
#Deleted in new
chr11	9146796	9150759	chr11:9146796-9150759	0	-	9146796	9146796	8553170	3	355,129,80,	0,3284,3883,
#Partially deleted in new
chr11	9169922	9178917	chr11:9169922-9178917	0	-	9176882	9178917	789624	5	27,151,131,235,60,	0,704,6849,8209,8935,
#Partially deleted in new
chr11	9175239	9178248	chr11:9175239-9178248	0	-	9175239	9175239	8553170	2	455,117,	0,2892,
#Partially deleted in new
chr11	9177929	9178949	chr11:9177929-9178949	0	-	9177929	9177929	8553170	2	437,92,	0,928,
#Partially deleted in new
chr11	9203531	9206718	chr11:9203531-9206718	0	-	9203531	9203531	8553170	2	786,46,	0,3141,
#Partially deleted in new
chr11	9204065	9265101	chr11:9204065-9265101	0	-	9207179	9265069	789624	5	252,110,36,72,141,	0,2607,3107,3495,60895,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	9279531	9279816	chr11:9279531-9279816	3	-	9279531	9279531	8553170	1	285,	0,
#Partially deleted in new
chr11	9280653	9314567	chr11:9280653-9314567	0	-	9283423	9314441	789624	8	388,223,139,105,94,129,118,247,	0,2717,5801,7048,7788,14605,18930,33667,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	9280653	9314636	chr11:9280653-9314636	0	-	9286588	9314441	789624	7	2940,139,105,101,129,118,316,	0,5801,7048,7788,14605,18930,33667,
#Partially deleted in new
chr11	9280656	9314567	chr11:9280656-9314567	1	-	9283423	9314441	789624	8	385,223,139,105,94,129,118,247,	0,2714,5798,7045,7785,14602,18927,33664,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	9280670	9314780	chr11:9280670-9314780	3	-	9283423	9314441	789624	7	2923,139,105,94,129,118,460,	0,5784,7031,7771,14588,18913,33650,
#Partially deleted in new
chr11	9283138	9288073	chr11:9283138-9288073	0	-	9283138	9283138	8553170	3	455,139,372,	0,3316,4563,
#Partially deleted in new
chr11	9283546	9314630	chr11:9283546-9314630	1	-	9283569	9314441	789624	6	47,105,94,129,118,310,	0,4155,4895,11712,16037,30774,
#Partially deleted in new
chr11	9295095	9314633	chr11:9295095-9314633	1	-	9295242	9314441	789624	3	292,118,313,	0,4488,19225,
#Deleted in new
chr11	9311283	9311689	chr11:9311283-9311689	7	-	9311283	9311283	16724991	1	406,	0,
#Partially deleted in new
chr11	9384621	9448126	chr11:9384621-9448126	3	+	9384763	9445194	789624	25	226,82,154,159,157,90,95,85,135,100,77,117,90,166,161,129,67,126,98,96,221,206,207,117,3030,	0,18668,23864,25306,29633,32437,35789,35992,38384,39155,40292,40524,43918,44409,45052,46253,48948,49099,50312,51649,53132,53458,55833,57459,60475,
#Partially deleted in new
chr11	9384652	9414353	chr11:9384652-9414353	0	+	9408505	9414353	789624	4	195,154,159,99,	0,23833,25275,29602,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	9402733	9403540	chr11:9402733-9403540	0	+	9402733	9402733	8553170	2	17,622,	0,185,
#Partially deleted in new
chr11	9410068	9414591	chr11:9410068-9414591	0	+	9410068	9410068	8553170	2	18,337,	0,4186,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	9420278	9420669	chr11:9420278-9420669	0	+	9420278	9420278	8553170	2	227,56,	0,335,
#Partially deleted in new
chr11	9423785	9425324	chr11:9423785-9425324	0	+	9423785	9423785	8553170	3	91,77,179,	0,1128,1360,
#Deleted in new
chr11	9428772	9428954	chr11:9428772-9428954	3	+	9428772	9428772	789624	1	182,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	9430355	9433486	chr11:9430355-9433486	3	-	9430355	9430355	8553170	2	249,348,	0,2783,
#Deleted in new
chr11	9459555	9460702	chr11:9459555-9460702	3	-	9459555	9459555	789624	1	1147,	0,
#Partially deleted in new
chr11	9460318	9478424	chr11:9460318-9478424	0	+	9471308	9478424	789624	6	140,119,93,84,84,35,	0,10983,12358,13622,14231,18071,
#Partially deleted in new
chr11	9460521	9528054	chr11:9460521-9528054	1	+	9471308	9527613	789624	16	334,119,93,84,81,197,75,120,76,126,180,228,149,162,147,525,	0,10780,12155,13419,14031,17868,18950,34124,35781,37153,40569,48097,51926,55679,64718,67008,
#Partially deleted in new
chr11	9460964	9528524	chr11:9460964-9528524	3	+	9471308	9527613	789624	16	112,119,93,84,84,197,75,120,76,126,180,228,149,162,147,995,	0,10337,11712,12976,13585,17425,18507,33681,35338,36710,40126,47654,51483,55236,64275,66565,
#Partially deleted in new
chr11	9460975	9527613	chr11:9460975-9527613	1	+	9471308	9527613	789624	16	101,119,93,84,81,197,75,120,76,126,180,228,149,162,147,84,	0,10326,11701,12965,13577,17414,18496,33670,35327,36699,40115,47643,51472,55225,64264,66554,
#Partially deleted in new
chr11	9460981	9479522	chr11:9460981-9479522	0	+	9471308	9479522	789624	6	95,119,84,81,197,51,	0,10320,12959,13571,17408,18490,
#Partially deleted in new
chr11	9460984	9478472	chr11:9460984-9478472	0	+	9471308	9478472	789624	6	92,115,93,84,81,83,	0,10321,11692,12956,13568,17405,
#Partially deleted in new
chr11	9460986	9527646	chr11:9460986-9527646	1	+	9471308	9527613	789624	15	90,119,84,84,197,75,120,76,126,180,228,149,162,147,117,	0,10315,12954,13563,17403,18485,33659,35316,36688,40104,47632,51461,55214,64253,66543,
#Partially deleted in new
chr11	9461005	9478586	chr11:9461005-9478586	0	+	9471308	9478586	789624	6	71,115,93,84,84,197,	0,10300,11671,12935,13544,17384,
#Partially deleted in new
chr11	9461011	9478434	chr11:9461011-9478434	0	+	9471308	9473832	789624	7	65,119,93,73,84,84,45,	0,10290,11665,12765,12929,13538,17378,
#Partially deleted in new
chr11	9461012	9478518	chr11:9461012-9478518	0	+	9471308	9478518	789624	6	64,115,93,84,84,125,	0,10293,11664,12928,13537,17381,
#Partially deleted in new
chr11	9461022	9528281	chr11:9461022-9528281	1	+	9471308	9527613	789624	15	54,119,93,84,197,75,120,76,126,180,228,149,162,147,752,	0,10279,11654,12918,17367,18449,33623,35280,36652,40068,47596,51425,55178,64217,66507,
#Partially deleted in new
chr11	9461026	9478541	chr11:9461026-9478541	0	+	9471308	9478541	789624	6	50,112,93,84,84,152,	0,10282,11650,12914,13523,17363,
#Partially deleted in new
chr11	9461056	9478446	chr11:9461056-9478446	0	+	9471308	9478446	789624	7	20,100,119,93,84,81,57,	0,2714,10245,11620,12884,13496,17333,
#Partially deleted in new
chr11	9461647	9473986	chr11:9461647-9473986	0	+	9471308	9473986	789624	4	293,119,93,46,	0,9654,11029,12293,
#Partially deleted in new
chr11	9462001	9473954	chr11:9462001-9473954	0	+	9471308	9473954	789624	4	39,119,93,14,	0,9300,10675,11939,
#Partially deleted in new
chr11	9471106	9472716	chr11:9471106-9472716	0	+	9471106	9471106	8553170	2	314,40,	0,1570,
#Partially deleted in new
chr11	9512496	9525479	chr11:9512496-9525479	0	+	9512496	9525479	789624	3	100,162,240,	0,3704,12743,
#Partially deleted in new
chr11	9525220	9527952	chr11:9525220-9527952	0	+	9525220	9525220	8553170	2	166,423,	0,2309,
#Partially deleted in new
chr11	9573680	9589207	chr11:9573680-9589207	3	+	9573933	9588602	0	11	829,206,64,173,122,147,96,86,171,146,759,	0,2207,2549,2806,3461,7851,11577,11761,12768,13030,14768,
#Partially deleted in new
chr11	9574686	9589984	chr11:9574686-9589984	1	+	9575953	9588602	0	11	689,206,64,173,122,147,96,86,171,146,1536,	0,1201,1543,1800,2455,6845,10571,10755,11762,12024,13762,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	9575489	9581487	chr11:9575489-9581487	0	+	9575489	9575489	8553170	4	604,64,173,4346,	0,740,997,1652,
#Partially deleted in new
chr11	9577784	9586581	chr11:9577784-9586581	0	+	9577870	9586581	789624	5	111,147,96,86,133,	0,3747,7473,7657,8664,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	9578027	9578131	chr11:9578027-9578131	3	+	9578027	9578027	8553170	1	104,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	9581226	9588487	chr11:9581226-9588487	0	+	9581572	9588487	789624	6	452,96,86,171,146,39,	0,4031,4215,5222,5484,7222,
#Partially deleted in new
chr11	9581543	9588701	chr11:9581543-9588701	0	+	9581543	9586617	789624	6	135,96,86,122,146,253,	0,3714,3898,4954,5167,6905,
#Partially deleted in new
chr11	9585182	9588456	chr11:9585182-9588456	0	+	9585182	9585182	8553170	5	171,86,171,146,8,	0,259,1266,1528,3266,
#Partially deleted in new
chr11	9586713	9593457	chr11:9586713-9593457	0	+	9586713	9593292	789624	3	143,89,233,	0,1735,6511,
#Deleted in new
chr11	9606141	9606609	chr11:9606141-9606609	7	+	9606141	9606141	16724991	1	468,	0,
#Partially deleted in new
chr11	9631007	9631359	chr11:9631007-9631359	7	-	9631007	9631007	16724991	1	352,	0,
#Deleted in new
chr11	9660437	9660920	chr11:9660437-9660920	7	+	9660437	9660437	16724991	1	483,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	9664076	9752991	chr11:9664076-9752991	3	+	9664179	9749970	0	12	202,141,174,228,147,109,182,108,167,199,97,3128,	0,30069,49389,60581,63976,65266,68452,74136,76104,83781,85010,85787,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	9664076	9751821	chr11:9664076-9751821	1	+	9664179	9749970	789624	11	202,141,228,147,109,182,108,167,199,97,1958,	0,30069,60581,63976,65266,68452,74136,76104,83781,85010,85787,
#Partially deleted in new
chr11	9664080	9728071	chr11:9664080-9728071	0	+	9664179	9713622	789624	6	198,141,53,174,228,19,	0,30065,39315,49385,60577,63972,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	9664101	9725055	chr11:9664101-9725055	0	+	9664101	9664101	8553170	3	177,141,398,	0,30044,60556,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	9664134	9741953	chr11:9664134-9741953	0	+	9664134	9664134	8553170	9	144,141,174,228,147,109,182,108,1773,	0,30011,49331,60523,63918,65208,68394,74078,76046,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	9680923	9681238	chr11:9680923-9681238	3	+	9680923	9680923	8553170	1	315,	0,
#Partially deleted in new
chr11	9720065	9738259	chr11:9720065-9738259	0	+	9724690	9738259	789624	6	418,228,147,109,182,47,	0,4592,7987,9277,12463,18147,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	9726894	9750491	chr11:9726894-9750491	0	+	9726894	9728062	789624	7	61,147,109,182,108,162,208,	0,1158,2448,5634,11318,13286,23389,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	9754769	9759533	chr11:9754769-9759533	3	-	9754769	9754769	789624	3	2129,77,105,	0,2997,4659,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	9755128	9758164	chr11:9755128-9758164	0	-	9755128	9755128	8553170	2	1770,398,	0,2638,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	9758291	9811319	chr11:9758291-9811319	0	+	9758291	9758291	789624	3	212,1437,1060,	0,49556,51968,
#Partially deleted in new
chr11	9758293	9780831	chr11:9758293-9780831	0	+	9758293	9758293	8553170	2	210,456,	0,22082,
#Partially deleted in new
chr11	9758295	9791244	chr11:9758295-9791244	0	+	9758295	9758295	8553170	4	208,200,70,376,	0,22080,24744,32573,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	9758300	9811335	chr11:9758300-9811335	3	+	9758300	9758300	8553170	5	203,126,200,1963,1201,	0,21516,22075,49547,51834,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	9775644	9808038	chr11:9775644-9808038	0	+	9775644	9775644	8553170	4	121,126,200,191,	0,4172,4731,32203,
#Duplicated in new
chr11	9775730	9808379	chr11:9775730-9808379	0	+	9775730	9775730	8553170	3	35,200,532,	0,4645,32117,
#Partially deleted in new
chr11	9778666	10294207	chr11:9778666-10294207	3	-	9780417	10294069	789624	40	1850,132,88,194,105,234,128,127,186,102,177,185,141,197,199,146,176,128,196,74,173,263,171,69,150,110,205,99,129,114,78,114,109,133,106,111,123,138,86,193,	0,2840,5684,6458,8967,10442,11889,17164,29333,30234,33865,38173,50689,53557,60831,63958,66898,68289,71356,74009,74873,77791,79559,117276,183290,185106,189674,210830,213748,214323,215254,219599,222247,223890,249785,251098,252381,264177,415235,515348,
#Partially deleted in new
chr11	9779153	9787973	chr11:9779153-9787973	0	-	9779153	9779153	8553170	5	1363,132,88,194,340,	0,2353,5197,5971,8480,
#Partially deleted in new
chr11	9781547	9785349	chr11:9781547-9785349	0	-	9781547	9781547	8553170	3	91,88,225,	0,2803,3577,
#Partially deleted in new
chr11	9784932	9789204	chr11:9784932-9789204	0	-	9785120	9789204	789624	3	386,105,96,	0,2701,4176,
#Partially deleted in new
chr11	9785150	9791237	chr11:9785150-9791237	0	+	9785150	9785150	8553170	2	119,369,	0,5718,
#Partially deleted in new
chr11	9795913	9812754	chr11:9795913-9812754	0	-	9795913	9795913	8553170	4	44,186,102,223,	0,12086,12987,16618,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	9808573	9810472	chr11:9808573-9810472	0	-	9808573	9808573	8553170	2	699,224,	0,1675,
#Partially deleted in new
chr11	9808911	9839603	chr11:9808911-9839603	0	-	9808911	9839603	789624	7	91,177,185,96,141,197,106,	0,3620,7928,19214,20444,23312,30586,
#Partially deleted in new
chr11	9812585	9819505	chr11:9812585-9819505	0	-	9812585	9812585	8553170	3	123,185,277,	0,4254,6643,
#Partially deleted in new
chr11	9812634	9829668	chr11:9812634-9829668	0	-	9812634	9812634	8553170	3	74,185,313,	0,4205,16721,
#Partially deleted in new
chr11	9838038	10193957	chr11:9838038-10193957	0	-	9838038	9838038	8553170	25	1658,146,176,128,196,74,173,263,171,69,150,110,205,99,129,114,78,114,109,133,106,111,123,138,56,	0,4586,7526,8917,11984,14637,15501,18419,20187,57904,123918,125734,130302,151458,154376,154951,155882,160227,162875,164518,190413,191726,193009,204805,355863,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	9839142	9929263	chr11:9839142-9929263	3	+	9839142	9839142	789624	3	134,78,374,	0,76463,89747,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	9843814	9843876	chr11:9843814-9843876	3	-	9843814	9843814	8553170	1	62,	0,
#Partially deleted in new
chr11	9853706	9993104	chr11:9853706-9993104	0	-	9853706	9993104	789624	9	6,263,171,69,150,110,205,99,115,	0,2751,4519,42236,108250,110066,114634,135790,139283,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	9956567	9968356	chr11:9956567-9968356	0	-	9956567	9956567	8553170	3	5539,110,16,	0,7205,11773,
#Deleted in new
chr11	9958743	9959790	chr11:9958743-9959790	7	-	9958743	9958743	16724991	1	1047,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	9993011	10044606	chr11:9993011-10044606	0	-	9993011	9993011	8553170	9	92,78,109,133,106,111,123,138,88,	0,909,7902,9545,35440,36753,38036,49832,51507,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	10016467	10042990	chr11:10016467-10042990	0	-	10016467	10016467	8553170	5	512,106,111,123,147,	0,11984,13297,14580,26376,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	10149191	10165109	chr11:10149191-10165109	3	+	10149191	10149191	8553170	2	371,151,	0,15767,
#Deleted in new
chr11	10272051	10272259	chr11:10272051-10272259	7	-	10272051	10272051	16724991	1	208,	0,
#Deleted in new
chr11	10302656	10303704	chr11:10302656-10303704	3	-	10302656	10302656	8553170	2	394,409,	0,639,
#Deleted in new
chr11	10304679	10307397	chr11:10304679-10307397	3	+	10305700	10306641	0	4	550,119,150,1066,	0,1000,1269,1652,
#Deleted in new
chr11	10305072	10307395	chr11:10305072-10307395	1	+	10305991	10306641	789624	3	157,419,1064,	0,607,1259,
#Deleted in new
chr11	10305073	10307362	chr11:10305073-10307362	1	+	10306287	10306641	789624	2	156,1683,	0,606,
#Deleted in new
chr11	10305076	10306260	chr11:10305076-10306260	1	+	10305700	10306102	789624	3	153,119,312,	0,603,872,
#Deleted in new
chr11	10305083	10307355	chr11:10305083-10307355	1	+	10305700	10306641	0	3	715,150,1024,	0,865,1248,
#Deleted in new
chr11	10305087	10306908	chr11:10305087-10306908	1	+	10305700	10306641	0	5	142,119,150,317,139,	0,592,861,1244,1682,
#Deleted in new
chr11	10305087	10306530	chr11:10305087-10306530	1	+	10305700	10306472	789624	4	142,119,150,230,	0,592,861,1213,
#Deleted in new
chr11	10305376	10306112	chr11:10305376-10306112	1	+	10305700	10306102	789624	2	422,164,	0,572,
#Partially deleted in new
chr11	10357272	10410838	chr11:10357272-10410838	0	+	10357272	10357272	8553170	2	119,82,	0,53484,
#Deleted in new
chr11	10399191	10399317	chr11:10399191-10399317	3	-	10399191	10399191	8553170	1	126,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	10408367	10410822	chr11:10408367-10410822	0	+	10408367	10408367	8553170	2	138,66,	0,2389,
#Partially deleted in new
chr11	10450320	10507579	chr11:10450320-10507579	1	+	10482113	10505884	789624	14	195,226,163,220,130,195,132,164,127,164,121,174,111,1872,	0,11194,31742,34499,36914,43028,44578,45249,46491,49765,51149,52400,54228,55387,
#Partially deleted in new
chr11	10450320	10482168	chr11:10450320-10482168	0	+	10450320	10450320	8553170	3	195,226,106,	0,11194,31742,
#Partially deleted in new
chr11	10450680	10507018	chr11:10450680-10507018	3	+	10451021	10505884	789624	15	363,226,205,163,220,130,195,132,164,127,164,121,174,111,1311,	0,10834,27845,31382,34139,36554,42668,44218,44889,46131,49405,50789,52040,53868,55027,
#Partially deleted in new
chr11	10450699	10485031	chr11:10450699-10485031	0	+	10461519	10485031	789624	6	65,109,226,205,163,212,	0,4640,10815,27826,31363,34120,
#Partially deleted in new
chr11	10450941	10505884	chr11:10450941-10505884	0	+	10451021	10484928	789624	15	102,226,205,163,134,130,195,132,164,178,164,121,174,111,177,	0,10573,27584,31121,33964,36293,42407,43957,44628,45819,49144,50528,51779,53607,54766,
#Partially deleted in new
chr11	10455319	10507126	chr11:10455319-10507126	1	+	10461519	10505884	789624	15	129,226,205,163,220,130,195,132,164,127,164,121,174,111,1419,	0,6195,23206,26743,29500,31915,38029,39579,40250,41492,44766,46150,47401,49229,50388,
#Partially deleted in new
chr11	10455406	10505812	chr11:10455406-10505812	0	+	10461519	10504597	789624	15	42,226,205,163,220,130,195,132,164,127,164,121,174,80,105,	0,6108,23119,26656,29413,31828,37942,39492,40163,41405,44679,46063,47314,49173,50301,
#Partially deleted in new
chr11	10456185	10506111	chr11:10456185-10506111	1	+	10456386	10505884	789624	15	217,226,205,163,220,130,195,132,164,127,164,121,174,111,404,	0,5329,22340,25877,28634,31049,37163,38713,39384,40626,43900,45284,46535,48363,49522,
#Partially deleted in new
chr11	10461139	10506446	chr11:10461139-10506446	1	+	10461519	10505884	789624	15	285,226,205,163,220,130,195,132,164,127,164,121,174,111,739,	0,375,17386,20923,23680,26095,32209,33759,34430,35672,38946,40330,41581,43409,44568,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	10481882	10485021	chr11:10481882-10485021	0	+	10481882	10481882	8553170	2	343,202,	0,2937,
#Partially deleted in new
chr11	10493366	10495632	chr11:10493366-10495632	0	+	10493366	10493699	789624	3	336,132,63,	0,1532,2203,
#Partially deleted in new
chr11	10500184	10505891	chr11:10500184-10505891	0	+	10500184	10502869	789624	5	65,121,112,111,184,	0,1285,2598,4364,5523,
#Deleted in new
chr11	10507886	10509189	chr11:10507886-10509189	3	-	10508151	10508226	789624	1	1303,	0,
#Deleted in new
chr11	10508269	10508326	chr11:10508269-10508326	3	-	10508269	10508269	5263520	1	57,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	10511677	10541217	chr11:10511677-10541217	3	-	10514915	10534158	0	6	3389,108,182,109,190,96,	0,7356,13514,18965,22338,29444,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	10511922	10517740	chr11:10511922-10517740	0	-	10511922	10511922	8553170	1	5818,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	10518317	10541190	chr11:10518317-10541190	1	-	10519029	10534158	789624	5	824,182,109,190,69,	0,6874,12325,15698,22804,
#Partially deleted in new
chr11	10519033	10540906	chr11:10519033-10540906	0	-	10519033	10534158	789624	5	108,182,109,190,154,	0,6158,11609,14982,21719,
#Partially deleted in new
chr11	10525191	10541230	chr11:10525191-10541230	0	-	10531999	10534158	789624	5	182,109,189,190,109,	0,5451,6635,8824,15930,
#Partially deleted in new
chr11	10541271	10599932	chr11:10541271-10599932	0	+	10541271	10541271	789624	3	271,112,204,	0,52845,58457,
#Partially deleted in new
chr11	10541296	10599877	chr11:10541296-10599877	3	+	10541296	10541296	789624	5	246,100,139,112,187,	0,44730,47715,52820,58394,
#Partially deleted in new
chr11	10556965	10568691	chr11:10556965-10568691	3	-	10559110	10568532	789624	6	2332,79,306,140,172,244,	0,2850,3529,6974,7237,11482,
#Partially deleted in new
chr11	10558362	10568718	chr11:10558362-10568718	0	-	10564040	10568532	789624	5	935,79,306,228,275,	0,1453,2132,5577,10081,
#Partially deleted in new
chr11	10558876	10568577	chr11:10558876-10568577	1	-	10559110	10568532	789624	4	421,79,306,130,	0,939,1618,9571,
#Partially deleted in new
chr11	10559815	10611689	chr11:10559815-10611689	0	-	10559815	10559815	8553170	5	79,306,140,28,123,	0,679,4124,4387,51751,
#Partially deleted in new
chr11	10573090	10652185	chr11:10573090-10652185	1	-	10576331	10626388	789624	19	3485,135,120,65,108,50,142,132,141,31,124,79,618,48,53,78,174,71,161,	0,7364,8776,18457,20401,21055,27827,30029,31314,33651,36637,50687,52875,54625,54882,55660,56447,58900,78934,
#Partially deleted in new
chr11	10573090	10693988	chr11:10573090-10693988	1	-	10576331	10626388	789624	19	3485,135,120,65,108,50,142,132,141,31,124,79,618,45,78,174,71,104,453,	0,7364,8776,18457,20401,21055,27827,30029,31314,33651,36637,50687,52875,54625,55660,56447,58900,60877,120445,
#Partially deleted in new
chr11	10573094	10693752	chr11:10573094-10693752	1	-	10576331	10693602	789624	21	3481,135,120,65,108,50,142,132,141,31,124,79,618,45,53,78,174,71,104,158,217,	0,7360,8772,18453,20397,21051,27823,30025,31310,33647,36633,50683,52871,54621,54878,55656,56443,58896,60873,78930,120441,
#Partially deleted in new
chr11	10576004	10693622	chr11:10576004-10693622	1	-	10576331	10693602	789624	20	571,135,120,65,108,50,142,132,141,31,124,79,45,53,78,174,71,104,158,87,	0,4450,5862,15543,17487,18141,24913,27115,28400,30737,33723,47773,51711,51968,52746,53533,55986,57963,76020,117531,
#Partially deleted in new
chr11	10576223	10652286	chr11:10576223-10652286	3	-	10576331	10652222	789624	20	352,135,120,65,108,50,142,132,141,31,124,79,618,48,53,78,174,71,104,262,	0,4231,5643,15324,17268,17922,24694,26896,28181,30518,33504,47554,49742,51492,51749,52527,53314,55767,57744,75801,
#Partially deleted in new
chr11	10576323	10693614	chr11:10576323-10693614	0	-	10629689	10693602	789624	19	252,135,120,65,108,50,142,132,141,31,124,79,618,45,78,174,71,104,79,	0,4131,5543,15224,17168,17822,24594,26796,28081,30418,33404,47454,49642,51392,52427,53214,55667,57644,117212,
#Partially deleted in new
chr11	10576323	10652376	chr11:10576323-10652376	1	-	10576331	10626388	789624	19	252,135,120,65,108,50,142,132,141,31,124,79,618,45,78,174,71,107,352,	0,4131,5543,15224,17168,17822,24594,26796,28081,30418,33404,47454,49642,51392,52427,53214,55667,57644,75701,
#Partially deleted in new
chr11	10581905	10693522	chr11:10581905-10693522	0	-	10593558	10652093	789624	17	81,65,108,142,132,141,31,124,79,45,53,78,174,71,107,158,61,	0,9642,11586,19012,21214,22499,24836,27822,41872,45810,46067,46845,47632,50085,52062,70119,111556,
#Partially deleted in new
chr11	10591575	10594023	chr11:10591575-10594023	0	-	10591575	10591575	8553170	2	37,532,	0,1916,
#Partially deleted in new
chr11	10593196	10599906	chr11:10593196-10599906	1	+	10593196	10593196	8553170	5	303,161,112,75,178,	0,623,920,2524,6532,
#Partially deleted in new
chr11	10609760	10633984	chr11:10609760-10633984	0	-	10627749	10633984	789624	7	91,79,48,78,174,71,17,	0,14017,17955,18990,19777,22230,24207,
#Partially deleted in new
chr11	10629684	10693957	chr11:10629684-10693957	0	-	10629684	10629684	8553170	6	27,66,71,107,158,138,	0,321,2306,4283,22340,64135,
#Partially deleted in new
chr11	10632027	10693514	chr11:10632027-10693514	0	-	10632027	10652093	789624	5	34,104,158,196,53,	0,1940,19997,26356,61434,
#Partially deleted in new
chr11	10632031	10693804	chr11:10632031-10693804	0	-	10632031	10632031	8553170	3	30,158,269,	0,19993,61504,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	10725902	10726004	chr11:10725902-10726004	3	+	10725902	10725902	8553170	1	102,	0,
#Partially deleted in new
chr11	10750986	10779743	chr11:10750986-10779743	3	+	10751412	10779105	789624	25	471,99,240,118,90,149,108,108,237,90,129,184,89,186,88,149,117,146,72,136,147,158,97,113,1065,	0,1685,3971,4691,5762,9186,10960,12444,12656,13125,13321,13561,15415,16819,17087,17356,19223,19500,20558,21533,22140,23025,24220,24534,27692,
#Partially deleted in new
chr11	10751451	10763734	chr11:10751451-10763734	0	+	10751451	10763734	789624	8	6,99,240,118,90,149,108,92,	0,1220,3506,4226,5297,8721,11979,12191,
#Deleted in new
chr11	10766333	10768476	chr11:10766333-10768476	0	+	10766333	10766333	8553170	4	157,186,88,134,	0,1472,1740,2009,
#Deleted in new
chr11	10767050	10768459	chr11:10767050-10768459	0	+	10767050	10767050	8553170	3	941,88,117,	0,1023,1292,
#Partially deleted in new
chr11	10772506	10774309	chr11:10772506-10774309	0	+	10772506	10772506	8553170	3	149,147,298,	0,620,1505,
#Partially deleted in new
chr11	10775520	10801625	chr11:10775520-10801625	0	+	10775520	10783335	789624	4	113,85,208,171,	0,7769,16574,25934,
#Partially deleted in new
chr11	10797049	10807973	chr11:10797049-10807973	1	-	10797815	10807295	789624	22	832,122,212,205,259,216,105,126,114,161,142,99,84,111,152,67,132,103,141,66,127,425,	0,1942,2163,2502,3040,3382,3681,3912,4611,4999,5244,5980,6161,6430,6849,7087,7237,7863,8857,9770,10205,10499,
#Partially deleted in new
chr11	10797052	10807462	chr11:10797052-10807462	1	-	10797815	10807295	789624	21	829,122,212,205,259,216,105,126,114,161,142,99,84,111,152,67,132,103,141,66,208,	0,1939,2160,2499,3037,3379,3678,3909,4608,4996,5241,5977,6158,6427,6846,7084,7234,7860,8854,9767,10202,
#Partially deleted in new
chr11	10797053	10809110	chr11:10797053-10809110	1	-	10797815	10807295	789624	22	828,122,212,205,259,216,105,126,114,161,142,99,84,111,152,67,132,103,141,66,127,406,	0,1938,2159,2498,3036,3378,3677,3908,4607,4995,5240,5976,6157,6426,6845,7083,7233,7859,8853,9766,10201,11651,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr11	10797053	10808028	chr11:10797053-10808028	0	-	10797053	10797053	8553170	15	828,122,212,797,216,105,126,549,142,99,84,571,67,729,2122,	0,1938,2159,2498,3378,3677,3908,4607,5240,5976,6157,6426,7083,7233,8853,
#Partially deleted in new
chr11	10797169	10808708	chr11:10797169-10808708	1	-	10797815	10807295	789624	21	712,122,212,205,259,216,105,126,161,142,99,84,111,152,67,132,103,141,66,127,4,	0,1822,2043,2382,2920,3262,3561,3792,4879,5124,5860,6041,6310,6729,6967,7117,7743,8737,9650,10085,11535,
#Partially deleted in new
chr11	10797711	10802346	chr11:10797711-10802346	0	-	10797711	10797711	8553170	2	170,53,	0,4582,
#Partially deleted in new
chr11	10797727	10799626	chr11:10797727-10799626	0	-	10797727	10797727	8553170	3	154,122,414,	0,1264,1485,
#Partially deleted in new
chr11	10797815	10807295	chr11:10797815-10807295	1	-	10797815	10807295	0	21	66,122,212,205,259,216,105,126,114,161,142,99,84,111,152,67,132,103,141,66,41,	0,1176,1397,1736,2274,2616,2915,3146,3845,4233,4478,5214,5395,5664,6083,6321,6471,7097,8091,9004,9439,
#Deleted in new
chr11	10798742	10799361	chr11:10798742-10799361	0	-	10798742	10798742	8553170	2	371,149,	0,470,
#Deleted in new
chr11	10798991	10800482	chr11:10798991-10800482	0	-	10798991	10800482	789624	5	122,212,58,259,51,	0,221,560,1098,1440,
#Deleted in new
chr11	10798991	10800295	chr11:10798991-10800295	0	-	10798991	10798991	8553170	4	122,212,205,52,	0,221,560,1252,
#Deleted in new
chr11	10800091	10801015	chr11:10800091-10801015	0	-	10800091	10801015	789624	5	77,105,216,105,54,	0,152,340,639,870,
#Deleted in new
chr11	10800530	10801588	chr11:10800530-10801588	0	-	10800530	10800530	8553170	3	117,105,627,	0,200,431,
#Partially deleted in new
chr11	10801054	10808084	chr11:10801054-10808084	2	-	10801054	10807295	789624	14	33,161,142,99,84,111,152,67,132,103,141,66,127,551,	0,994,1239,1975,2156,2425,2844,3082,3232,3858,4852,5765,6200,6479,
#Deleted in new
chr11	10801466	10801608	chr11:10801466-10801608	3	-	10801466	10801466	789624	1	142,	0,
#Partially deleted in new
chr11	10802059	10807334	chr11:10802059-10807334	0	-	10802428	10807295	789624	5	150,142,141,66,80,	0,234,3847,4760,5195,
#Partially deleted in new
chr11	10803260	10808309	chr11:10803260-10808309	0	-	10803260	10807295	789624	10	34,111,152,67,132,103,141,66,127,136,	0,219,638,876,1026,1652,2646,3559,3994,4913,
#Deleted in new
chr11	10803511	10804538	chr11:10803511-10804538	0	-	10803511	10803511	8553170	4	79,152,67,252,	0,387,625,775,
#Partially deleted in new
chr11	10803560	10808940	chr11:10803560-10808940	0	-	10803560	10807295	789624	10	30,152,67,132,103,141,66,127,232,236,	0,338,576,726,1352,2346,3259,3694,4716,5144,
#Deleted in new
chr11	10803941	10804606	chr11:10803941-10804606	0	-	10803941	10803941	8553170	2	262,320,	0,345,
#Partially deleted in new
chr11	10804180	10805949	chr11:10804180-10805949	0	-	10804399	10805949	789624	3	23,132,43,	0,106,1726,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	10804291	10806263	chr11:10804291-10806263	0	-	10804291	10804291	8553170	3	127,103,357,	0,621,1615,
#Partially deleted in new
chr11	10804296	10808923	chr11:10804296-10808923	0	-	10804296	10807295	789624	5	122,103,34,93,219,	0,616,1610,2992,4408,
#Partially deleted in new
chr11	10804339	10808923	chr11:10804339-10808923	0	-	10804339	10804339	8553170	5	79,103,118,72,219,	0,573,1567,2970,4365,
#Partially deleted in new
chr11	10804363	10808923	chr11:10804363-10808923	0	-	10804363	10804363	8553170	5	55,103,141,66,219,	0,549,1543,2456,4341,
#Partially deleted in new
chr11	10804371	10808924	chr11:10804371-10808924	0	-	10805910	10807295	789624	5	47,103,104,127,220,	0,541,1535,2883,4333,
#Partially deleted in new
chr11	10804380	10808940	chr11:10804380-10808940	0	-	10804380	10807295	789624	7	38,103,141,66,127,39,59,	0,532,1526,2439,2874,4324,4501,
#Partially deleted in new
chr11	10804915	10808923	chr11:10804915-10808923	0	-	10804915	10807295	789624	5	100,141,66,65,219,	0,991,1904,2339,3789,
#Partially deleted in new
chr11	10804926	10807876	chr11:10804926-10807876	0	-	10804926	10807295	789624	5	89,141,66,127,132,	0,980,1893,2328,2818,
#Partially deleted in new
chr11	10804945	10808929	chr11:10804945-10808929	0	-	10804945	10807295	789624	4	70,141,127,225,	0,961,2309,3759,
#Partially deleted in new
chr11	10804984	10808630	chr11:10804984-10808630	0	-	10804984	10804984	8553170	4	31,141,66,354,	0,922,1835,3292,
#Deleted in new
chr11	10806502	10807677	chr11:10806502-10807677	0	-	10806502	10806502	8553170	2	383,423,	0,752,
#Deleted in new
chr11	10807073	10808919	chr11:10807073-10808919	0	-	10807073	10807073	8553170	2	308,215,	0,1631,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	10809296	10822931	chr11:10809296-10822931	3	+	10809296	10809296	789624	3	70,65,2200,	0,560,11435,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	10812073	10856218	chr11:10812073-10856218	0	-	10812073	10812073	8553170	5	3049,164,84,305,75,	0,11030,24910,26195,44070,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	10813005	10826582	chr11:10813005-10826582	0	-	10813005	10813005	8553170	3	2117,164,933,	0,10098,12644,
#Partially deleted in new
chr11	10849896	10858073	chr11:10849896-10858073	2	-	10849896	10849896	8553170	3	207,114,212,	0,6247,7965,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	10852703	10858073	chr11:10852703-10858073	1	-	10852863	10854945	789624	3	2415,114,212,	0,3440,5158,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	10852863	10858036	chr11:10852863-10858036	1	-	10852863	10854945	789624	3	2223,114,175,	0,3280,4998,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	10854618	10858796	chr11:10854618-10858796	0	-	10854618	10854945	789624	3	463,114,935,	0,1525,3243,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	10854667	10857819	chr11:10854667-10857819	0	-	10854667	10854945	789624	3	451,114,224,	0,1476,2928,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	10854736	10857637	chr11:10854736-10857637	0	-	10854736	10854945	789624	3	350,114,415,	0,1407,2486,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	10854766	10858065	chr11:10854766-10858065	0	-	10854766	10854945	789624	3	320,62,204,	0,1377,3095,
#Deleted in new
chr11	10855657	10858065	chr11:10855657-10858065	0	-	10855657	10855657	8553170	3	226,114,204,	0,486,2204,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	10858258	10879276	chr11:10858258-10879276	3	+	10858258	10858258	789624	3	108,67,896,	0,7002,20122,
#Partially deleted in new
chr11	10858267	10878409	chr11:10858267-10878409	1	+	10858267	10858267	8553170	3	675,67,29,	0,6993,20113,
#Partially deleted in new
chr11	10865260	10906802	chr11:10865260-10906802	0	+	10865260	10865260	8553170	2	67,348,	0,41194,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	10896502	10899172	chr11:10896502-10899172	1	-	10896502	10896502	8553170	2	516,41,	0,2629,
#Partially deleted in new
chr11	11020882	11183609	chr11:11020882-11183609	0	+	11020882	11020882	8553170	7	158,114,118,98,375,242,247,	0,96953,148198,159024,161444,162127,162480,
#Partially deleted in new
chr11	11117853	11183611	chr11:11117853-11183611	3	+	11117853	11117853	8553170	7	96,12,335,118,98,925,249,	0,2670,49969,51227,62053,64473,65509,
#Partially deleted in new
chr11	11135481	11137658	chr11:11135481-11137658	7	+	11135481	11135481	16724991	2	1005,382,	0,1795,
#Deleted in new
chr11	11182106	11182413	chr11:11182106-11182413	7	-	11182106	11182106	16724991	1	307,	0,
#Deleted in new
chr11	11239758	11240280	chr11:11239758-11240280	7	+	11239758	11239758	16724991	1	522,	0,
#Deleted in new
chr11	11243187	11243715	chr11:11243187-11243715	3	-	11243187	11243187	8553170	2	399,27,	0,501,
#Partially deleted in new
chr11	11270875	11622005	chr11:11270875-11622005	3	-	11271143	11621593	789624	11	415,165,96,138,186,115,198,184,167,193,647,	0,22153,56210,61818,69943,101639,106306,108205,161745,177868,350483,
#Deleted in new
chr11	11351941	11353357	chr11:11351941-11353357	3	-	11351943	11353119	789624	1	1416,	0,
#Deleted in new
chr11	11352425	11353307	chr11:11352425-11353307	3	+	11352425	11352425	8553170	2	415,179,	0,703,
#Partially deleted in new
chr11	11475176	11621758	chr11:11475176-11621758	0	-	11475176	11475176	8553170	3	986,137,400,	0,1139,146182,
#Partially deleted in new
chr11	11570083	11573782	chr11:11570083-11573782	3	+	11570083	11570083	8553170	2	114,258,	0,3441,
#Deleted in new
chr11	11656650	11656722	chr11:11656650-11656722	3	-	11656650	11656650	5263520	1	72,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	11725331	11726702	chr11:11725331-11726702	3	-	11725331	11725331	8553170	1	1371,	0,
#Deleted in new
chr11	11759100	11759433	chr11:11759100-11759433	7	-	11759100	11759100	16724991	1	333,	0,
#Deleted in new
chr11	11783134	11783222	chr11:11783134-11783222	3	-	11783134	11783134	5263520	1	88,	0,
#Partially deleted in new
chr11	11841422	11959323	chr11:11841422-11959323	1	+	11842185	11956175	789624	27	802,114,139,97,146,80,150,96,153,168,132,77,56,113,105,208,116,120,778,176,81,116,119,131,48,131,3323,	0,43044,50545,56174,61292,61840,63976,78733,78919,81301,88011,88621,89273,91581,92408,94880,96834,99006,100912,106522,107055,108466,108941,111318,113474,113611,114578,
#Partially deleted in new
chr11	11841939	11884499	chr11:11841939-11884499	0	+	11841939	11841939	8553170	4	285,26,204,33,	0,36684,38237,42527,
#Partially deleted in new
chr11	11841974	11956421	chr11:11841974-11956421	3	+	11842185	11956175	789624	28	250,204,114,139,97,146,80,150,96,153,168,132,77,56,113,105,208,116,120,778,176,81,116,119,131,48,131,421,	0,38202,42492,49993,55622,60740,61288,63424,78181,78367,80749,87459,88069,88721,91029,91856,94328,96282,98454,100360,105970,106503,107914,108389,110766,112922,113059,114026,
#Partially deleted in new
chr11	11842065	11959323	chr11:11842065-11959323	1	+	11842185	11956175	789624	29	159,60,204,114,139,97,146,80,150,96,153,168,132,77,56,113,105,208,116,120,778,176,81,116,119,131,48,131,3323,	0,31734,38111,42401,49902,55531,60649,61197,63333,78090,78276,80658,87368,87978,88630,90938,91765,94237,96191,98363,100269,105879,106412,107823,108298,110675,112831,112968,113935,
#Deleted in new
chr11	11856489	11856859	chr11:11856489-11856859	7	-	11856489	11856489	16724991	1	370,	0,
#Partially deleted in new
chr11	11880185	11884705	chr11:11880185-11884705	0	+	11880185	11880185	8553170	2	195,239,	0,4281,
#Partially deleted in new
chr11	11938329	11943149	chr11:11938329-11943149	0	+	11938329	11938329	8553170	3	43,120,815,	0,2099,4005,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	11942949	11949074	chr11:11942949-11949074	0	+	11942949	11942949	8553170	3	163,176,597,	0,4995,5528,
#Partially deleted in new
chr11	11943426	11949975	chr11:11943426-11949975	0	+	11943426	11943426	8553170	4	423,176,81,87,	0,4518,5051,6462,
#Partially deleted in new
chr11	11948023	11952777	chr11:11948023-11952777	0	+	11948023	11948023	8553170	5	221,81,116,119,37,	0,454,1865,2340,4717,
#Partially deleted in new
chr11	11950442	11959154	chr11:11950442-11959154	0	+	11950442	11950442	8553170	6	40,73,131,48,131,3154,	0,1254,2298,4454,4591,5558,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	11950872	11956945	chr11:11950872-11956945	0	+	11950872	11950872	8553170	4	1999,48,131,945,	0,4024,4161,5128,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	11963105	12009370	chr11:11963105-12009370	3	-	11964463	12008582	789624	8	1581,157,145,93,84,138,239,199,	0,2703,3848,5289,35590,39194,45264,46066,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	11963105	12009082	chr11:11963105-12009082	1	-	11964463	12008582	789624	8	1581,157,145,93,84,138,239,213,	0,2703,3848,5289,35590,39194,45264,45764,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	11963105	12008630	chr11:11963105-12008630	0	-	11963105	11963105	8553170	2	1364,261,	0,45264,
#Partially deleted in new
chr11	11964390	12009769	chr11:11964390-12009769	1	-	11964463	12008582	789624	8	338,157,145,93,84,138,239,132,	0,1418,2563,4004,34305,37909,43979,45247,
#Partially deleted in new
chr11	11964614	11994719	chr11:11964614-11994719	0	-	11964614	11964614	8553170	5	72,157,145,93,99,	0,1194,2339,3780,30006,
#Partially deleted in new
chr11	11965849	11968746	chr11:11965849-11968746	0	-	11965849	11965849	8553170	3	116,145,352,	0,1104,2545,
#Partially deleted in new
chr11	11965872	11979916	chr11:11965872-11979916	0	-	11965872	11965872	8553170	4	93,145,93,231,	0,1081,2522,13813,
#Partially deleted in new
chr11	11965879	12008897	chr11:11965879-12008897	0	-	11965879	11965879	8553170	6	86,145,93,84,138,28,	0,1074,2515,32816,36420,42990,
#Partially deleted in new
chr11	11965934	12009211	chr11:11965934-12009211	0	-	11965934	12008582	789624	7	31,145,93,84,138,239,173,	0,1019,2460,32761,36365,42435,43104,
#Partially deleted in new
chr11	11966992	12008624	chr11:11966992-12008624	0	-	11966992	12008582	789624	4	106,93,138,255,	0,1402,35307,41377,
#Partially deleted in new
chr11	11968442	12009137	chr11:11968442-12009137	0	-	11968442	12008582	789624	4	45,138,239,99,	0,33857,39927,40596,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	11978839	12009725	chr11:11978839-12009725	0	-	11978839	11978839	8553170	6	215,98,84,138,239,88,	0,846,19856,23460,29530,30798,
#Partially deleted in new
chr11	11998199	12002426	chr11:11998199-12002426	0	-	11998199	11998199	8553170	2	580,127,	0,4100,
#Deleted in new
chr11	12001674	12009737	chr11:12001674-12009737	0	-	12001674	12001674	8553170	4	201,138,239,100,	0,625,6695,7963,
#Deleted in new
chr11	12001748	12009330	chr11:12001748-12009330	0	-	12001748	12001748	8553170	3	689,239,159,	0,6621,7423,
#Deleted in new
chr11	12001903	12009212	chr11:12001903-12009212	0	-	12001903	12001903	8553170	4	299,138,239,41,	0,396,6466,7268,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	12030874	12061785	chr11:12030874-12061785	3	+	12030874	12030874	789624	2	56,3252,	0,27659,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	12066928	12073014	chr11:12066928-12073014	3	+	12066928	12066928	8553170	2	75,824,	0,5262,
#Partially deleted in new
chr11	12086890	12089441	chr11:12086890-12089441	3	+	12086890	12086890	8553170	2	230,320,	0,2231,
#Partially deleted in new
chr11	12094007	12204280	chr11:12094007-12204280	0	+	12162155	12204280	789624	3	217,341,31,	0,68071,110242,
#Partially deleted in new
chr11	12094016	12162420	chr11:12094016-12162420	0	+	12162155	12162420	789624	3	131,73,342,	0,15684,68062,
#Partially deleted in new
chr11	12094127	12096221	chr11:12094127-12096221	0	+	12094127	12094127	8553170	3	97,86,238,	0,1416,1856,
#Partially deleted in new
chr11	12110590	12263785	chr11:12110590-12263785	1	+	12162155	12262520	0	28	136,75,341,208,117,102,156,101,258,116,127,91,148,200,107,69,150,123,219,102,126,63,108,187,89,103,58,226,	0,27799,51488,93659,97432,98906,102664,105628,109610,111053,112026,112820,114082,115580,116434,125586,128845,130449,131623,132080,133396,138593,145052,146194,147877,149204,151889,152969,
#Partially deleted in new
chr11	12110604	12208369	chr11:12110604-12208369	0	+	12110604	12110604	8553170	5	122,71,341,208,347,	0,27785,51474,93645,97418,
#Partially deleted in new
chr11	12121474	12162419	chr11:12121474-12162419	0	+	12162155	12162419	789624	2	175,341,	0,40604,
#Partially deleted in new
chr11	12138387	12262919	chr11:12138387-12262919	1	+	12162155	12262520	0	22	77,341,208,117,102,156,101,258,116,127,91,148,200,107,69,150,63,108,187,89,103,440,	0,23691,65862,69635,71109,74867,77831,81813,83256,84229,85023,86285,87783,88637,97789,101048,110796,117255,118397,120080,121407,124092,
#Partially deleted in new
chr11	12161442	12204347	chr11:12161442-12204347	0	+	12162155	12204347	789624	3	134,341,98,	0,636,42807,
#Partially deleted in new
chr11	12161445	12204387	chr11:12161445-12204387	0	+	12162155	12204387	789624	3	87,341,138,	0,633,42804,
#Partially deleted in new
chr11	12161867	12204290	chr11:12161867-12204290	0	+	12162155	12204290	789624	2	552,41,	0,42382,
#Partially deleted in new
chr11	12162155	12260172	chr11:12162155-12260172	0	+	12162155	12162155	8553170	18	264,208,117,102,156,101,258,116,127,91,148,200,107,69,150,187,89,378,	0,42094,45867,47341,51099,54063,58045,59488,60461,61255,62517,64015,64869,74021,77280,94629,96312,97639,
#Partially deleted in new
chr11	12162155	12358479	chr11:12162155-12358479	3	+	12162155	12358479	789624	35	264,208,117,102,156,101,258,116,127,91,148,200,107,69,150,123,219,102,126,63,108,187,89,103,181,167,78,155,1297,116,93,94,100,74,185,	0,42094,45867,47341,51099,54063,58045,59488,60461,61255,62517,64015,64869,74021,77280,78884,80058,80515,81831,87028,93487,94629,96312,97639,113830,118777,124931,129987,131405,157540,161822,165017,187682,192628,196139,
#Deleted in new
chr11	12163682	12163767	chr11:12163682-12163767	3	+	12163682	12163682	789624	1	85,	0,
#Partially deleted in new
chr11	12195944	12208146	chr11:12195944-12208146	0	+	12195944	12195944	8553170	3	256,208,124,	0,8305,12078,
#Deleted in new
chr11	12195944	12197811	chr11:12195944-12197811	0	+	12195944	12195944	8553170	2	256,325,	0,1542,
#Partially deleted in new
chr11	12207724	12263785	chr11:12207724-12263785	0	+	12207724	12207724	8553170	16	415,102,156,101,258,116,127,91,148,200,107,69,150,187,89,3991,	0,1772,5530,8494,12476,13919,14892,15686,16948,18446,19300,28452,31711,49060,50743,52070,
#Partially deleted in new
chr11	12213254	12216393	chr11:12213254-12216393	0	+	12213254	12213254	8553170	2	156,175,	0,2964,
#Partially deleted in new
chr11	12224437	12227193	chr11:12224437-12227193	0	+	12224437	12224437	8553170	3	383,200,169,	0,1733,2587,
#Partially deleted in new
chr11	12226206	12244034	chr11:12226206-12244034	0	+	12226206	12226206	8553170	5	164,107,69,150,48,	0,818,9970,13229,17780,
#Partially deleted in new
chr11	12239459	12257233	chr11:12239459-12257233	0	+	12239459	12239459	8553170	2	126,449,	0,17325,
#Deleted in new
chr11	12242181	12242984	chr11:12242181-12242984	0	+	12242181	12242181	8553170	3	251,102,106,	0,489,697,
#Partially deleted in new
chr11	12242320	12259942	chr11:12242320-12259942	0	+	12242320	12242320	8553170	4	112,187,89,148,	0,14464,16147,17474,
#Partially deleted in new
chr11	12243199	12256968	chr11:12243199-12256968	0	+	12243199	12243199	8553170	4	202,63,108,184,	0,5984,12443,13585,
#Partially deleted in new
chr11	12249940	12256909	chr11:12249940-12256909	0	+	12249940	12249940	8553170	3	333,108,125,	0,5702,6844,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	12252531	12263787	chr11:12252531-12263787	0	+	12252531	12252531	8553170	6	3219,187,89,103,156,228,	0,4253,5936,7263,9948,11028,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	12253233	12263782	chr11:12253233-12263782	0	+	12253233	12253233	8553170	4	3738,89,103,1303,	0,5234,6561,9246,
#Partially deleted in new
chr11	12256841	12260748	chr11:12256841-12260748	0	+	12256841	12256841	8553170	4	130,89,103,113,	0,1626,2953,3794,
#Deleted in new
chr11	12259688	12263781	chr11:12259688-12263781	0	+	12259688	12259688	8553170	3	209,58,222,	0,2791,3871,
#Deleted in new
chr11	12261425	12263173	chr11:12261425-12263173	3	-	12261425	12261425	8553170	2	47,453,	0,1295,
#Partially deleted in new
chr11	12274313	12294745	chr11:12274313-12294745	0	+	12274313	12274313	8553170	6	382,184,167,78,155,1185,	0,1669,6619,12773,17829,19247,
#Partially deleted in new
chr11	12276079	12287314	chr11:12276079-12287314	0	+	12276079	12287223	789624	3	87,167,228,	0,4853,11007,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	12276079	12287314	chr11:12276079-12287314	0	+	12276079	12276079	8553170	4	87,457,167,228,	0,179,4853,11007,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	12276079	12287314	chr11:12276079-12287314	0	+	12276079	12276667	789624	5	87,73,96,167,228,	0,179,540,4853,11007,
#Partially deleted in new
chr11	12280944	12292255	chr11:12280944-12292255	0	+	12280944	12292255	789624	3	155,75,113,	0,6145,11198,
#Partially deleted in new
chr11	12286899	12359144	chr11:12286899-12359144	1	+	12292168	12358479	0	9	265,155,1297,116,93,94,100,74,850,	0,5243,6661,32796,37078,40273,62938,67884,71395,
#Partially deleted in new
chr11	12286899	12359144	chr11:12286899-12359144	0	+	12286899	12286899	8553170	9	265,155,1297,116,93,94,100,74,850,	0,5243,6661,32796,37078,40273,62938,67884,71395,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	12303532	12308216	chr11:12303532-12308216	3	+	12303532	12303532	8553170	2	268,116,	0,4568,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	12377184	12530801	chr11:12377184-12530801	1	+	12377647	12527925	0	13	599,90,71,103,141,116,59,20,62,69,102,73,2953,	0,96560,96728,100662,119273,127129,131399,134329,136114,136812,140425,141260,150664,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	12377478	12535356	chr11:12377478-12535356	3	+	12377527	12527925	8553170	13	305,90,71,103,141,116,59,20,62,69,102,73,7508,	0,96266,96434,100368,118979,126835,131105,134035,135820,136518,140131,140966,150370,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	12377562	12480809	chr11:12377562-12480809	0	+	12377562	12377562	8553170	4	221,90,71,2963,	0,96182,96350,100284,
#Partially deleted in new
chr11	12398240	12513804	chr11:12398240-12513804	0	+	12398240	12398240	8553170	8	113,90,71,103,141,116,75,506,	0,75504,75672,79606,98217,106073,110343,115058,
#Partially deleted in new
chr11	12452734	12511533	chr11:12452734-12511533	0	+	12453003	12511533	789624	8	297,90,71,103,141,116,59,20,	0,21010,21178,25112,43723,51579,55849,58779,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	12473743	12477924	chr11:12473743-12477924	0	+	12473743	12473743	8553170	4	91,71,105,78,	0,169,3373,4103,
#Partially deleted in new
chr11	12473743	12504355	chr11:12473743-12504355	0	+	12473743	12473743	8553170	4	91,71,52,42,	0,169,22803,30570,
#Partially deleted in new
chr11	12538082	12540967	chr11:12538082-12540967	3	-	12538082	12538082	8553170	2	462,57,	0,2828,
#Partially deleted in new
chr11	12674590	12938034	chr11:12674590-12938034	1	+	12764232	12937222	789624	13	244,153,256,65,63,135,47,62,125,174,141,153,926,	0,818,89588,187659,190247,205117,206414,207305,208410,227349,250321,255583,262518,
#Partially deleted in new
chr11	12674616	12764437	chr11:12674616-12764437	0	+	12674616	12764437	789624	2	218,259,	0,89562,
#Partially deleted in new
chr11	12675502	12939065	chr11:12675502-12939065	3	+	12764277	12937222	0	12	59,256,65,63,12,135,47,62,125,141,153,1957,	0,88676,186747,189335,203386,204205,205502,206393,207498,249409,254671,261606,
#Partially deleted in new
chr11	12675502	12939065	chr11:12675502-12939065	1	+	12764232	12937222	789624	11	59,256,65,63,135,47,62,125,141,153,1957,	0,88676,186747,189335,204205,205502,206393,207498,249409,254671,261606,
#Partially deleted in new
chr11	12764232	12937222	chr11:12764232-12937222	1	+	12764232	12937222	0	11	202,65,63,135,47,62,125,174,141,153,114,	0,98017,100605,115475,116772,117663,118768,137707,160679,165941,172876,
#Partially deleted in new
chr11	12822434	12823667	chr11:12822434-12823667	3	-	12822434	12822434	8553170	2	228,261,	0,972,
#Partially deleted in new
chr11	12828120	12865539	chr11:12828120-12865539	0	+	12828120	12828120	8553170	3	215,65,854,	0,34129,36565,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	12848794	12849433	chr11:12848794-12849433	3	+	12848794	12848794	8553170	2	85,334,	0,305,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	12879442	12944483	chr11:12879442-12944483	1	+	12879665	12937222	789624	8	400,47,62,125,174,141,153,7375,	0,1562,2453,3558,22497,45469,50731,57666,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	12904816	12904988	chr11:12904816-12904988	3	-	12904816	12904816	8553170	1	172,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	12921185	12922925	chr11:12921185-12922925	3	-	12921185	12921185	8553170	2	91,475,	0,1265,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	12979534	12989548	chr11:12979534-12989548	1	-	12979534	12979534	789624	2	1465,93,	0,9921,
#Partially deleted in new
chr11	12980486	12984292	chr11:12980486-12984292	0	-	12980486	12980486	8553170	2	513,67,	0,3739,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	12980628	12989546	chr11:12980628-12989546	0	-	12980628	12980628	8553170	4	281,113,105,91,	0,3597,5411,8827,
#Partially deleted in new
chr11	13001089	13009159	chr11:13001089-13009159	3	-	13001089	13001089	8553170	2	137,533,	0,7537,
#Deleted in new
chr11	13009576	13012106	chr11:13009576-13012106	3	+	13009576	13011100	789624	1	2530,	0,
#Deleted in new
chr11	13152199	13152348	chr11:13152199-13152348	7	+	13152199	13152199	16724991	1	149,	0,
#Partially deleted in new
chr11	13276651	13354377	chr11:13276651-13354377	0	+	13354308	13354377	789624	3	421,73,77,	0,33335,77649,
#Partially deleted in new
chr11	13276651	13356777	chr11:13276651-13356777	0	+	13354308	13356777	789624	5	421,73,126,148,39,	0,33335,73293,77649,80087,
#Partially deleted in new
chr11	13277638	13358440	chr11:13277638-13358440	0	+	13354308	13358440	789624	8	29,73,55,126,148,39,42,7,	0,32348,48774,72306,76662,79100,79416,80795,
#Partially deleted in new
chr11	13277792	13358514	chr11:13277792-13358514	0	+	13354308	13358514	789624	6	131,126,148,39,42,81,	0,72152,76508,78946,79262,80641,
#Partially deleted in new
chr11	13277793	13358481	chr11:13277793-13358481	0	+	13355285	13358481	789624	7	130,73,148,71,39,42,48,	0,32193,76507,77432,78945,79261,80640,
#Partially deleted in new
chr11	13277797	13387266	chr11:13277797-13387266	3	+	13354308	13386756	0	20	126,73,55,126,148,39,42,158,80,93,118,150,244,107,151,89,109,94,103,671,	0,32189,48615,72147,76503,78941,79257,80636,82547,87702,88867,91820,94368,96297,97814,98842,100539,103363,107891,108798,
#Partially deleted in new
chr11	13277797	13387266	chr11:13277797-13387266	1	+	13355285	13386756	0	20	126,73,126,148,64,39,42,158,80,93,118,150,247,107,151,89,109,94,103,671,	0,32189,72147,76503,77435,78941,79257,80636,82547,87702,88867,91820,94365,96297,97814,98842,100539,103363,107891,108798,
#Partially deleted in new
chr11	13277801	13360372	chr11:13277801-13360372	0	+	13354308	13360372	789624	7	122,73,148,39,42,158,28,	0,32185,76499,78937,79253,80632,82543,
#Partially deleted in new
chr11	13277814	13365592	chr11:13277814-13365592	0	+	13355285	13365592	789624	10	109,73,55,148,71,39,42,158,80,93,	0,32172,48598,76486,77411,78924,79240,80619,82530,87685,
#Partially deleted in new
chr11	13277828	13356929	chr11:13277828-13356929	0	+	13277828	13277828	8553170	5	95,73,126,148,191,	0,32158,72116,76472,78910,
#Partially deleted in new
chr11	13277830	13387266	chr11:13277830-13387266	1	+	13354308	13386756	0	20	93,73,55,126,148,39,42,158,80,93,118,150,247,107,151,89,109,94,103,671,	0,32156,48582,72114,76470,78908,79224,80603,82514,87669,88834,91787,94332,96264,97781,98809,100506,103330,107858,108765,
#Partially deleted in new
chr11	13277841	13387263	chr11:13277841-13387263	1	+	13355285	13386756	0	20	82,73,126,148,71,39,42,158,80,93,118,150,244,107,151,89,109,94,103,668,	0,32145,72103,76459,77384,78897,79213,80592,82503,87658,88823,91776,94324,96253,97770,98798,100495,103319,107847,108754,
#Partially deleted in new
chr11	13277884	13358558	chr11:13277884-13358558	0	+	13355285	13358558	789624	10	39,73,55,126,148,21,71,39,42,125,	0,32102,48528,72060,76416,77105,77341,78854,79170,80549,
#Partially deleted in new
chr11	13309985	13357096	chr11:13309985-13357096	0	+	13354308	13357096	789624	4	74,126,148,42,	0,39959,44315,47069,
#Partially deleted in new
chr11	13349944	13354631	chr11:13349944-13354631	0	+	13349944	13349944	8553170	2	126,331,	0,4356,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	13353207	13353523	chr11:13353207-13353523	3	+	13353207	13353207	8553170	1	316,	0,
#Partially deleted in new
chr11	13356877	13387266	chr11:13356877-13387266	1	+	13356881	13386756	0	14	219,158,80,93,118,150,247,107,151,89,109,94,103,671,	0,1556,3467,8622,9787,12740,15285,17217,18734,19762,21459,24283,28811,29718,
#Partially deleted in new
chr11	13358433	13372409	chr11:13358433-13372409	0	+	13358433	13358433	8553170	6	158,80,93,118,71,244,	0,1911,7066,8231,11263,13732,
#Partially deleted in new
chr11	13365415	13369740	chr11:13365415-13369740	0	+	13365415	13365415	8553170	3	177,118,123,	0,1249,4202,
#Partially deleted in new
chr11	13372208	13376771	chr11:13372208-13376771	0	+	13372208	13372208	8553170	4	201,107,151,132,	0,1886,3403,4431,
#Partially deleted in new
chr11	13374092	13387266	chr11:13374092-13387266	0	+	13374092	13378408	789624	7	109,151,184,109,94,103,671,	0,1519,2452,4244,7068,11596,12503,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	13375678	13387263	chr11:13375678-13387263	0	+	13375678	13375678	8553170	5	84,89,2918,103,668,	0,961,2658,10010,10917,
#Partially deleted in new
chr11	13388000	13463280	chr11:13388000-13463280	3	-	13388830	13445124	789624	9	1141,111,198,121,103,286,197,158,189,	0,15167,17658,25529,29157,31459,33641,57023,75091,
#Partially deleted in new
chr11	13388023	13463226	chr11:13388023-13463226	0	-	13413639	13445124	789624	9	1118,111,198,121,14,286,197,158,135,	0,15144,17635,25506,29223,31436,33618,57000,75068,
#Partially deleted in new
chr11	13388682	13440279	chr11:13388682-13440279	1	-	13388830	13440008	789624	8	459,111,198,121,103,286,197,396,	0,14485,16976,24847,28475,30777,32959,51201,
#Partially deleted in new
chr11	13388701	13463297	chr11:13388701-13463297	1	-	13388830	13421795	789624	8	440,111,198,121,103,286,197,206,	0,14466,16957,24828,28456,30758,32940,74390,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	13405327	13463180	chr11:13405327-13463180	0	-	13405327	13405327	8553170	6	529,121,103,286,197,89,	0,8202,11830,14132,16314,57764,
#Partially deleted in new
chr11	13405548	13440208	chr11:13405548-13440208	0	-	13405548	13405548	8553170	6	308,121,103,286,197,110,	0,7981,11609,13911,16093,34550,
#Partially deleted in new
chr11	13405765	13463297	chr11:13405765-13463297	0	-	13421805	13445124	789624	7	91,121,103,286,174,158,206,	0,7764,11392,13694,15876,39258,57326,
#Partially deleted in new
chr11	13419492	13440208	chr11:13419492-13440208	0	-	13419492	13419492	8553170	3	253,197,110,	0,2149,20606,
#Partially deleted in new
chr11	13421741	13463276	chr11:13421741-13463276	0	-	13421741	13445124	789624	4	97,158,176,185,	0,23282,40880,41350,
#Partially deleted in new
chr11	13421746	13463181	chr11:13421746-13463181	0	-	13421746	13445124	789624	4	92,158,176,82,	0,23277,40875,41353,
#Partially deleted in new
chr11	13445164	13463252	chr11:13445164-13463252	0	-	13445164	13445164	8553170	3	17,71,161,	0,14501,17927,
#Deleted in new
chr11	13478332	13479037	chr11:13478332-13479037	7	+	13478332	13478332	16724991	1	705,	0,
#Deleted in new
chr11	13488611	13489390	chr11:13488611-13489390	7	+	13488611	13488611	16724991	2	234,96,	0,683,
#Deleted in new
chr11	13492054	13496020	chr11:13492054-13496020	1	-	13492404	13492855	0	3	612,91,110,	0,715,3856,
#Deleted in new
chr11	13492098	13496181	chr11:13492098-13496181	3	-	13492404	13492855	0	3	568,91,140,	0,671,3943,
#Deleted in new
chr11	13610362	13610771	chr11:13610362-13610771	7	-	13610362	13610362	16724991	1	409,	0,
#Partially deleted in new
chr11	13668669	13732346	chr11:13668669-13732346	3	+	13694765	13728774	789624	12	137,196,176,180,178,45,119,68,172,130,128,3735,	0,26089,31647,39230,42023,43094,43258,44296,45839,53060,58886,59942,
#Partially deleted in new
chr11	13668710	13713084	chr11:13668710-13713084	0	+	13694765	13713084	789624	8	96,196,176,180,178,45,119,119,	0,26048,31606,39189,41982,43053,43217,44255,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	13669326	13670149	chr11:13669326-13670149	3	+	13669326	13669326	8553170	2	330,38,	0,785,
#Deleted in new
chr11	13685498	13685656	chr11:13685498-13685656	7	-	13685498	13685498	16724991	1	158,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	13686549	13686658	chr11:13686549-13686658	3	-	13686549	13686549	8553170	1	109,	0,
#Partially deleted in new
chr11	13694755	13700567	chr11:13694755-13700567	0	+	13694755	13694755	8553170	2	199,251,	0,5561,
#Partially deleted in new
chr11	13694899	13711099	chr11:13694899-13711099	0	+	13694899	13694899	8553170	4	55,176,180,407,	0,5417,13000,15793,
#Deleted in new
chr11	13710723	13715843	chr11:13710723-13715843	0	+	13710723	13710723	8553170	6	147,45,128,68,172,43,	0,1040,1204,2242,3785,5077,
#Partially deleted in new
chr11	13719902	13732346	chr11:13719902-13732346	1	+	13721730	13728774	789624	3	1957,128,3735,	0,7653,8709,
#Partially deleted in new
chr11	13756026	13757560	chr11:13756026-13757560	7	+	13756026	13756026	16724991	2	349,853,	0,681,
#Deleted in new
chr11	13758110	13758345	chr11:13758110-13758345	7	-	13758110	13758110	16724991	1	235,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	13784028	13847999	chr11:13784028-13847999	3	+	13784028	13784028	8553170	7	370,92,124,193,119,264,293,	0,1333,1961,56626,59360,60894,63678,
#Partially deleted in new
chr11	13785389	13848002	chr11:13785389-13848002	0	+	13785389	13785389	789624	3	64,124,296,	0,600,62317,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	13826842	13879499	chr11:13826842-13879499	3	-	13826842	13826842	8553170	2	438,78,	0,52579,
#Partially deleted in new
chr11	13844861	13870616	chr11:13844861-13870616	3	-	13844861	13844861	789624	4	145,40,52,69,	0,23775,24477,25686,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	13907483	13907590	chr11:13907483-13907590	7	-	13907483	13907483	16724991	1	107,	0,
#Partially deleted in new
chr11	13921449	13924863	chr11:13921449-13924863	3	-	13921449	13921449	789624	2	512,172,	0,3242,
#Partially deleted in new
chr11	13962688	14267884	chr11:13962688-14267884	3	+	13962904	14265687	0	16	454,107,134,74,123,149,65,202,141,76,183,171,168,165,264,2361,	0,20158,78832,112656,117210,172731,280643,291839,292958,293928,295027,296591,296845,297899,300023,302835,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	14134985	14135100	chr11:14134985-14135100	7	+	14134985	14134985	16724991	1	115,	0,
#Partially deleted in new
chr11	14262446	14265999	chr11:14262446-14265999	0	+	14262446	14262446	8553170	2	529,476,	0,3077,
#Partially deleted in new
chr11	14262845	14273691	chr11:14262845-14273691	3	-	14262845	14262845	8553170	2	202,38,	0,10808,
#Partially deleted in new
chr11	14277925	14364506	chr11:14277925-14364506	1	-	14279336	14364393	0	6	1499,119,109,103,88,116,	0,3676,16545,16834,17842,86465,
#Partially deleted in new
chr11	14277963	14295859	chr11:14277963-14295859	1	-	14279336	14294827	0	5	1461,119,109,103,92,	0,3638,16507,16796,17804,
#Partially deleted in new
chr11	14278681	14364506	chr11:14278681-14364506	1	-	14279336	14294827	0	6	743,119,109,103,88,116,	0,2920,15789,16078,17086,85709,
#Partially deleted in new
chr11	14278749	14359184	chr11:14278749-14359184	3	-	14279336	14358870	0	6	675,119,109,103,88,422,	0,2852,15721,16010,17018,80013,
#Partially deleted in new
chr11	14278938	14354500	chr11:14278938-14354500	1	-	14279336	14294827	0	6	486,119,109,103,88,88,	0,2663,15532,15821,16829,75474,
#Partially deleted in new
chr11	14279102	14358485	chr11:14279102-14358485	1	-	14279336	14294827	0	6	322,119,109,103,88,229,	0,2499,15368,15657,16665,79154,
#Partially deleted in new
chr11	14279109	14358485	chr11:14279109-14358485	1	-	14279336	14294827	0	6	315,119,109,103,88,248,	0,2492,15361,15650,16658,79128,
#Partially deleted in new
chr11	14279396	14342094	chr11:14279396-14342094	0	-	14279396	14341860	789624	6	28,119,109,103,88,285,	0,2205,15074,15363,16371,62413,
#Partially deleted in new
chr11	14281601	14359147	chr11:14281601-14359147	0	-	14356733	14358870	789624	6	119,109,103,88,84,385,	0,12869,13158,14166,75084,77161,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	14281689	14337166	chr11:14281689-14337166	0	-	14281689	14294827	789624	5	31,109,103,88,166,	0,12781,13070,14078,55311,
#Partially deleted in new
chr11	14294459	14359155	chr11:14294459-14359155	0	-	14308266	14358870	789624	5	120,103,88,111,393,	0,300,1308,13747,64303,
#Partially deleted in new
chr11	14440786	14441677	chr11:14440786-14441677	7	+	14440786	14440786	16724991	2	103,409,	0,482,
#Partially deleted in new
chr11	14443439	14457886	chr11:14443439-14457886	0	-	14443439	14443439	8553170	2	407,103,	0,14344,
#Partially deleted in new
chr11	14451834	14461222	chr11:14451834-14461222	0	-	14451834	14451834	8553170	6	102,81,100,156,90,37,	0,1390,5949,6697,8373,9351,
#Partially deleted in new
chr11	14457505	14499852	chr11:14457505-14499852	3	-	14457823	14498928	789624	22	378,156,90,146,120,145,180,228,121,161,97,146,147,108,120,138,93,115,170,230,148,244,	0,1026,2702,3680,7405,8776,11175,11830,16989,18279,19413,22063,23253,23484,25526,28861,30986,33059,36136,36704,41332,42103,
#Partially deleted in new
chr11	14457549	14499895	chr11:14457549-14499895	1	-	14457823	14498928	789624	22	334,156,90,146,120,145,180,228,121,161,97,146,147,108,120,138,93,115,170,230,148,189,	0,982,2658,3636,7361,8732,11131,11786,16945,18235,19369,22019,23209,23440,25482,28817,30942,33015,36092,36660,41288,42157,
#Partially deleted in new
chr11	14460015	14461341	chr11:14460015-14461341	0	-	14460015	14460015	8553170	2	282,156,	0,1170,
#Partially deleted in new
chr11	14474009	14475875	chr11:14474009-14475875	0	-	14474009	14474009	8553170	2	606,91,	0,1775,
#Partially deleted in new
chr11	14476916	14499811	chr11:14476916-14499811	0	-	14476916	14498928	789624	12	99,146,147,108,120,138,93,115,170,230,148,70,	0,2652,3842,4073,6115,9450,11575,13648,16725,17293,21921,22825,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	14478891	14478953	chr11:14478891-14478953	3	+	14478891	14478891	8553170	1	62,	0,
#Partially deleted in new
chr11	14493720	14499862	chr11:14493720-14499862	0	-	14493720	14498928	789624	4	91,230,148,260,	0,489,5117,5882,
#Partially deleted in new
chr11	14493736	14500027	chr11:14493736-14500027	0	-	14493736	14498928	789624	4	75,230,148,123,	0,473,5101,6168,
#Partially deleted in new
chr11	14493782	14520344	chr11:14493782-14520344	3	-	14510942	14520299	789624	12	29,230,148,92,111,80,130,102,104,102,45,48,	0,427,5055,11374,13873,17089,19787,20607,23859,24097,25214,26514,
#Partially deleted in new
chr11	14494259	14499666	chr11:14494259-14499666	0	-	14494259	14494259	8553170	4	180,155,148,64,	0,313,4578,5343,
#Partially deleted in new
chr11	14494309	14499810	chr11:14494309-14499810	0	-	14494309	14494309	8553170	4	130,155,148,104,	0,263,4528,5397,
#Partially deleted in new
chr11	14494316	14499846	chr11:14494316-14499846	0	-	14494316	14494316	8553170	4	123,196,148,140,	0,215,4521,5390,
#Partially deleted in new
chr11	14504873	14511031	chr11:14504873-14511031	0	-	14504873	14504873	8553170	3	375,111,160,	0,2782,5998,
#Partially deleted in new
chr11	14504875	14520696	chr11:14504875-14520696	3	-	14505191	14520299	0	10	373,111,80,130,71,89,104,102,45,400,	0,2780,5996,8694,8941,9527,12766,13004,14121,15421,
#Partially deleted in new
chr11	14504912	14520363	chr11:14504912-14520363	1	-	14505191	14517954	789624	10	336,111,80,130,71,89,104,102,45,459,	0,2743,5959,8657,8904,9490,12729,12967,14084,14992,
#Partially deleted in new
chr11	14504923	14520359	chr11:14504923-14520359	0	-	14504923	14504923	8553170	7	325,80,675,104,102,45,63,	0,5948,8893,12718,12956,14073,15373,
#Partially deleted in new
chr11	14505063	14643617	chr11:14505063-14643617	1	-	14505191	14610986	0	11	185,111,80,130,71,89,104,102,45,186,163,	0,2592,5808,8506,8753,9339,12578,12816,13933,105902,138391,
#Partially deleted in new
chr11	14507586	14514002	chr11:14507586-14514002	0	-	14507586	14507586	8553170	3	180,80,433,	0,3285,5983,
#Partially deleted in new
chr11	14510913	14514293	chr11:14510913-14514293	0	-	14510913	14510913	8553170	3	38,130,477,	0,2656,2903,
#Partially deleted in new
chr11	14513459	14520380	chr11:14513459-14520380	0	-	14513459	14513459	8553170	5	240,104,102,45,84,	0,4182,4420,5537,6837,
#Partially deleted in new
chr11	14513663	14517673	chr11:14513663-14517673	0	-	14513663	14513663	8553170	3	36,675,32,	0,153,3978,
#Partially deleted in new
chr11	14514314	14520338	chr11:14514314-14520338	0	-	14514314	14514314	8553170	5	177,104,102,45,146,	0,3327,3565,4682,5878,
#Partially deleted in new
chr11	14514341	14520072	chr11:14514341-14520072	0	-	14514341	14514341	8553170	5	150,104,102,45,168,	0,3300,3538,4655,5563,
#Partially deleted in new
chr11	14517911	14520445	chr11:14517911-14520445	0	-	14517911	14517954	789624	4	70,45,307,149,	0,1085,1993,2385,
#Partially deleted in new
chr11	14517948	14520382	chr11:14517948-14520382	0	-	14517948	14517954	8553170	3	33,45,510,	0,1048,1924,
#Partially deleted in new
chr11	14610853	14643635	chr11:14610853-14643635	0	-	14610853	14610853	8553170	2	298,181,	0,32601,
#Partially deleted in new
chr11	14643722	14872044	chr11:14643722-14872044	3	+	14644075	14869660	0	16	1331,51,249,137,107,211,74,149,138,112,114,200,204,162,253,2584,	0,128214,142714,145383,160221,174460,175413,186975,187917,188999,191259,200104,215320,217482,223783,225738,
#Partially deleted in new
chr11	14643830	14869894	chr11:14643830-14869894	1	+	14644075	14869660	0	16	1223,51,96,137,107,211,74,149,138,112,114,200,204,162,253,434,	0,128106,142606,145275,160113,174352,175305,186867,187809,188891,191151,199996,215212,217374,223675,225630,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	14644259	14776663	chr11:14644259-14776663	0	+	14644259	14644259	8553170	2	794,4727,	0,127677,
#Deleted in new
chr11	14673605	14674555	chr11:14673605-14674555	7	-	14673605	14673605	16724991	1	950,	0,
#Deleted in new
chr11	14698838	14700926	chr11:14698838-14700926	0	+	14698838	14698838	8553170	2	515,273,	0,1815,
#Partially deleted in new
chr11	14788938	14819206	chr11:14788938-14819206	0	+	14788938	14788938	8553170	4	304,107,211,71,	0,15005,29244,30197,
#Partially deleted in new
chr11	14877439	14892252	chr11:14877439-14892252	3	-	14878121	14892205	0	5	858,330,633,142,272,	0,1674,2696,8336,14541,
#Partially deleted in new
chr11	14878006	14887334	chr11:14878006-14887334	0	-	14880731	14885852	789624	4	291,86,389,1559,	0,1107,2373,7769,
#Partially deleted in new
chr11	14878008	14891640	chr11:14878008-14891640	0	-	14880731	14885852	789624	5	289,330,633,142,488,	0,1105,2127,7767,13144,
#Partially deleted in new
chr11	14878008	14891662	chr11:14878008-14891662	0	-	14880731	14885852	789624	5	289,94,633,142,510,	0,1105,2127,7767,13144,
#Partially deleted in new
chr11	14878011	14885841	chr11:14878011-14885841	0	-	14879175	14885841	789624	3	286,94,66,	0,1102,7764,
#Partially deleted in new
chr11	14878037	14891651	chr11:14878037-14891651	1	-	14878121	14885852	789624	6	260,330,224,142,38,752,	0,1076,2098,7738,12394,12862,
#Partially deleted in new
chr11	14880134	14890531	chr11:14880134-14890531	0	-	14880134	14880134	8553170	3	634,142,100,	0,5641,10297,
#Partially deleted in new
chr11	14880314	14891492	chr11:14880314-14891492	0	-	14880314	14880314	8553170	3	454,142,129,	0,5461,11049,
#Partially deleted in new
chr11	14880336	14885977	chr11:14880336-14885977	0	-	14880336	14880336	8553170	2	432,202,	0,5439,
#Partially deleted in new
chr11	14880633	14891530	chr11:14880633-14891530	0	-	14880633	14880633	8553170	4	135,142,38,167,	0,5142,9798,10730,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	14904996	15078636	chr11:14904996-15078636	1	+	14978335	15077445	789624	10	473,136,47,90,71,469,95,138,185,554,	0,2862,4869,8390,21148,72894,169713,170064,172289,173086,
#Deleted in new
chr11	14907517	14907986	chr11:14907517-14907986	7	+	14907517	14907517	16724991	2	97,115,	0,354,
#Partially deleted in new
chr11	14966667	14971201	chr11:14966667-14971201	1	-	14967694	14971192	789624	4	434,181,141,95,	0,1006,3267,4439,
#Partially deleted in new
chr11	14966668	14972286	chr11:14966668-14972286	3	-	14967694	14971192	789624	5	433,181,141,95,66,	0,1005,3266,4438,5552,
#Partially deleted in new
chr11	14966670	14970016	chr11:14966670-14970016	0	-	14966670	14966670	8553170	3	431,1324,82,	0,1003,3264,
#Partially deleted in new
chr11	14967039	14972272	chr11:14967039-14972272	0	-	14967827	14971192	789624	6	62,181,172,141,95,28,	0,634,1786,2895,4067,5205,
#Partially deleted in new
chr11	14968500	14972354	chr11:14968500-14972354	1	-	14968798	14971192	789624	4	497,141,95,110,	0,1434,2606,3744,
#Partially deleted in new
chr11	14968705	14972273	chr11:14968705-14972273	1	-	14968798	14971192	789624	4	292,141,95,53,	0,1229,2401,3515,
#Deleted in new
chr11	14987670	14988694	chr11:14987670-14988694	7	-	14987670	14987670	16724991	1	1024,	0,
#Deleted in new
chr11	15073561	15078632	chr11:15073561-15078632	1	+	15074718	15077445	789624	5	102,95,138,185,550,	0,1148,1499,3724,4521,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	15073561	15082342	chr11:15073561-15082342	3	+	15074718	15077445	789624	5	102,95,138,185,1577,	0,1148,1499,3724,7204,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	15112423	15247208	chr11:15112423-15247208	3	+	15112469	15246040	0	13	142,101,346,53,124,114,126,172,179,67,156,77,1297,	0,36706,63317,64687,65900,78277,88400,109053,113226,123178,126495,128023,133488,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	15114937	15247208	chr11:15114937-15247208	1	+	15149174	15246040	0	13	66,101,346,53,124,114,126,172,179,67,156,77,1297,	0,34192,60803,62173,63386,75763,85886,106539,110712,120664,123981,125509,130974,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	15149101	15247206	chr11:15149101-15247206	1	+	15149177	15246040	789624	13	129,346,53,124,105,114,126,172,179,67,156,77,1295,	0,26639,28009,29222,35316,41599,51722,72375,76548,86500,89817,91345,96810,
#Partially deleted in new
chr11	15149101	15246526	chr11:15149101-15246526	1	+	15149174	15245925	0	13	129,346,53,124,114,126,172,179,67,156,77,79,615,	0,26639,28009,29222,41599,51722,72375,76548,86500,89817,91345,92465,96810,
#Partially deleted in new
chr11	15149107	15246076	chr11:15149107-15246076	1	+	15149174	15246040	0	11	123,346,53,124,114,172,179,67,156,77,165,	0,26633,28003,29216,41593,72369,76542,86494,89811,91339,96804,
#Partially deleted in new
chr11	15149107	15246076	chr11:15149107-15246076	1	+	15149174	15246040	0	12	123,346,53,124,114,126,172,179,67,156,77,165,	0,26633,28003,29216,41593,51716,72369,76542,86494,89811,91339,96804,
#Partially deleted in new
chr11	15188187	15246076	chr11:15188187-15246076	0	+	15188187	15188187	8553170	8	147,114,172,179,67,156,77,165,	0,2513,33289,37462,47414,50731,52259,57724,
#Partially deleted in new
chr11	15235144	15246318	chr11:15235144-15246318	0	+	15235144	15235144	8553170	5	56,67,156,77,407,	0,457,3774,5302,10767,
#Deleted in new
chr11	15481807	15481893	chr11:15481807-15481893	3	-	15481807	15481807	8553170	1	86,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	15552854	15591098	chr11:15552854-15591098	3	+	15552854	15552854	8553170	5	59,45,351,95,21,	0,4363,9023,32853,38223,
#Partially deleted in new
chr11	15571818	15622403	chr11:15571818-15622403	3	-	15571818	15571818	8553170	3	582,170,99,	0,17262,50486,
#Partially deleted in new
chr11	15572022	15622391	chr11:15572022-15622391	0	-	15572022	15572022	8553170	2	378,87,	0,50282,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	15643884	15705368	chr11:15643884-15705368	3	+	15643884	15643884	8553170	3	151,126,194,	0,60448,61290,
#Partially deleted in new
chr11	15701962	15758898	chr11:15701962-15758898	3	-	15701962	15701962	8553170	9	221,61,59,77,128,59,43,158,187,	0,319,1788,2581,5004,8999,12373,14158,56749,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	15910956	15927443	chr11:15910956-15927443	3	+	15910956	15910956	8553170	4	114,103,99,212,	0,825,12327,16275,
#Partially deleted in new
chr11	15966448	16341269	chr11:15966448-16341269	1	-	15972808	16341248	789624	15	6664,217,174,109,188,184,150,123,80,121,69,173,90,208,258,	0,19755,22548,48493,80065,83306,89303,129547,131160,145354,217437,220334,268133,351997,374563,
#Partially deleted in new
chr11	15966448	16476388	chr11:15966448-16476388	3	-	15972808	16341248	789624	16	6664,217,174,109,188,184,150,123,80,121,69,173,90,208,241,74,	0,19755,22548,48493,80065,83306,89303,129547,131160,145354,217437,220334,268133,351997,374563,509866,
#Deleted in new
chr11	15969532	15969621	chr11:15969532-15969621	3	-	15969532	15969532	5263520	1	89,	0,
#Partially deleted in new
chr11	15972698	16408884	chr11:15972698-16408884	1	-	15972808	16341248	789624	15	414,217,234,109,188,226,150,80,121,69,173,90,208,241,187,	0,13505,16298,42243,73815,77014,83053,124910,139104,211187,214084,261883,345747,368313,435999,
#Partially deleted in new
chr11	15972707	16402846	chr11:15972707-16402846	1	-	15972808	16402663	789624	15	405,217,234,109,188,226,150,80,121,69,173,90,208,241,188,	0,13496,16289,42234,73806,77005,83044,124901,139095,211178,214075,261874,345738,368304,429951,
#Partially deleted in new
chr11	15972707	16402863	chr11:15972707-16402863	1	-	15972808	16341248	789624	16	405,217,234,109,188,184,150,123,80,121,69,173,90,208,241,64,	0,13496,16289,42234,73806,77047,83044,123288,124901,139095,211178,214075,261874,345738,368304,430092,
#Partially deleted in new
chr11	15986264	16015327	chr11:15986264-16015327	0	-	15986264	15986264	8553170	4	156,234,109,75,	0,2732,28677,28988,
#Partially deleted in new
chr11	16023189	16031515	chr11:16023189-16031515	3	+	16023189	16023189	8553170	2	104,93,	0,8233,
#Partially deleted in new
chr11	16049781	16111869	chr11:16049781-16111869	0	-	16049781	16049781	8553170	5	157,150,80,80,67,	0,5970,47827,60538,62021,
#Partially deleted in new
chr11	16186780	16252536	chr11:16186780-16252536	0	-	16186780	16186780	8553170	3	175,90,164,	0,47801,65592,
#Partially deleted in new
chr11	16234639	16397562	chr11:16234639-16397562	0	-	16234639	16341248	789624	4	32,208,241,105,	0,83806,106372,162818,
#Partially deleted in new
chr11	16264448	16738643	chr11:16264448-16738643	0	-	16283883	16341248	789624	10	398,125,163,208,241,74,180,76,134,219,	0,5495,19307,53997,76563,211866,347632,450381,471890,473976,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	16311244	16341269	chr11:16311244-16341269	0	-	16311244	16311244	8553170	3	6758,208,258,	0,7201,29767,
#Partially deleted in new
chr11	16318471	16382398	chr11:16318471-16382398	0	-	16318471	16341248	789624	3	182,241,111,	0,22540,63816,
#Partially deleted in new
chr11	16341010	16434450	chr11:16341010-16434450	0	-	16341010	16341248	789624	2	242,307,	0,93133,
#Partially deleted in new
chr11	16465780	16607727	chr11:16465780-16607727	0	-	16465780	16465780	8553170	3	36,74,550,	0,10534,141397,
#Partially deleted in new
chr11	16465790	16738643	chr11:16465790-16738643	0	-	16465790	16465790	8553170	6	26,74,180,76,134,219,	0,10524,146290,249039,270548,272634,
#Partially deleted in new
chr11	16476337	16739591	chr11:16476337-16739591	0	-	16476337	16476337	8553170	5	51,180,76,134,133,	0,135743,238492,260001,263121,
#Deleted in new
chr11	16484083	16484671	chr11:16484083-16484671	7	-	16484083	16484083	16724991	1	588,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	16576850	16577135	chr11:16576850-16577135	3	+	16576850	16576850	8553170	1	285,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	16613131	16748421	chr11:16613131-16748421	0	+	16613131	16613131	8553170	4	83,321,84,325,	0,32857,131469,134965,
#Partially deleted in new
chr11	16738400	16756223	chr11:16738400-16756223	3	+	16738778	16755104	789624	5	441,84,61,110,1353,	0,6200,9696,14384,16470,
#Partially deleted in new
chr11	16738643	16754906	chr11:16738643-16754906	0	+	16738778	16754906	789624	4	198,61,110,36,	0,9453,14141,16227,
#Partially deleted in new
chr11	16738657	16755067	chr11:16738657-16755067	1	+	16738778	16754874	789624	4	184,84,110,197,	0,5943,14127,16213,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	16738657	16755055	chr11:16738657-16755055	1	+	16738778	16754874	789624	6	184,84,61,110,152,185,	0,5943,9439,14127,15226,16213,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	16738658	16748591	chr11:16738658-16748591	0	+	16738658	16738658	8553170	3	183,84,495,	0,5942,9438,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	16744235	16748196	chr11:16744235-16748196	0	+	16744235	16744235	8553170	2	449,100,	0,3861,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	16746703	16755346	chr11:16746703-16755346	0	+	16746703	16746703	8553170	3	1454,110,476,	0,6081,8167,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	16749113	16755347	chr11:16749113-16755347	0	+	16749113	16749113	8553170	2	3781,477,	0,5757,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	16756024	16756881	chr11:16756024-16756881	0	+	16756024	16756024	8553170	2	340,66,	0,791,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	16777316	16801044	chr11:16777316-16801044	0	-	16780951	16801044	789624	12	1704,111,143,134,159,201,104,118,192,227,109,71,	0,3625,5437,6383,8912,11779,12458,13481,13694,17171,17593,23657,
#Partially deleted in new
chr11	16778294	17014443	chr11:16778294-17014443	1	-	16778997	17014401	789624	27	726,143,134,159,201,104,118,189,227,109,102,150,81,69,54,87,523,471,176,101,73,105,112,84,58,77,128,	0,4459,5405,7934,10801,11480,12503,12716,16193,16615,22679,23373,24677,24932,34818,37883,38505,47825,63252,72896,73988,76594,77508,92804,235694,235830,236021,
#Partially deleted in new
chr11	16781027	16855914	chr11:16781027-16855914	0	-	16781052	16855914	789624	23	177,143,134,159,201,104,118,192,150,102,150,81,69,54,120,87,523,471,176,101,73,105,112,	0,1726,2672,5201,8068,8747,9770,9983,13460,19946,20640,21944,22199,32085,34147,35150,35772,45092,60519,70163,71255,73861,74775,
#Deleted in new
chr11	16786292	16789857	chr11:16786292-16789857	0	-	16786292	16786292	8553170	4	95,128,201,83,	0,817,2803,3482,
#Partially deleted in new
chr11	16787483	17014412	chr11:16787483-17014412	3	-	16789086	17014401	789624	23	1813,104,118,189,227,109,102,150,81,69,54,87,523,471,176,101,73,105,112,84,58,77,97,	0,2291,3314,3527,7004,7426,13490,14184,15488,15743,25629,28694,29316,38636,54063,63707,64799,67405,68319,83615,226505,226641,226832,
#Deleted in new
chr11	16787659	16791728	chr11:16787659-16791728	0	-	16787659	16787659	8553170	5	1637,104,118,192,141,	0,2115,3138,3351,3928,
#Partially deleted in new
chr11	16787659	16826354	chr11:16787659-16826354	0	-	16789086	16826354	789624	14	1637,104,118,192,227,109,102,150,81,69,54,87,523,235,	0,2115,3138,3351,6828,7250,13314,14008,15312,15567,25453,28518,29140,38460,
#Deleted in new
chr11	16787659	16791345	chr11:16787659-16791345	0	-	16787659	16787659	8553170	2	3256,335,	0,3351,
#Partially deleted in new
chr11	16787689	16816264	chr11:16787689-16816264	0	-	16789086	16816264	789624	13	1607,104,118,192,227,109,102,150,81,69,81,54,87,	0,2085,3108,3321,6798,7220,13284,13978,15282,15537,19454,25423,28488,
#Partially deleted in new
chr11	16788814	16817415	chr11:16788814-16817415	0	-	16788814	16788814	8553170	13	482,104,118,192,227,109,102,150,81,69,54,87,616,	0,960,1983,2196,5673,6095,12159,12853,14157,14412,24298,27363,27985,
#Partially deleted in new
chr11	16788982	17014412	chr11:16788982-17014412	1	-	16789238	17014337	789624	4	314,95,59,97,	0,792,225160,225333,
#Deleted in new
chr11	16789267	16790095	chr11:16789267-16790095	0	-	16789267	16789267	8553170	2	29,321,	0,507,
#Partially deleted in new
chr11	16791170	16795323	chr11:16791170-16795323	0	-	16791170	16791170	8553170	3	32,227,414,	0,3317,3739,
#Partially deleted in new
chr11	16794962	16812483	chr11:16794962-16812483	0	-	16794962	16803295	789624	6	56,102,150,81,69,81,	0,6011,6705,8009,8264,17440,
#Partially deleted in new
chr11	16801015	16813315	chr11:16801015-16813315	0	-	16801015	16801015	8553170	5	60,150,81,69,203,	0,652,1956,2211,12097,
#Partially deleted in new
chr11	16801024	16803533	chr11:16801024-16803533	0	-	16801024	16801024	8553170	4	51,150,81,307,	0,643,1947,2202,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	16842252	16842587	chr11:16842252-16842587	3	+	16842252	16842252	8553170	1	335,	0,
#Partially deleted in new
chr11	16851197	16881358	chr11:16851197-16881358	0	-	16851197	16855901	789624	6	94,73,105,112,84,75,	0,1085,3691,4605,19901,30086,
#Partially deleted in new
chr11	16854888	16881619	chr11:16854888-16881619	0	-	16854888	16854888	8553170	5	105,93,112,84,336,	0,730,914,16210,26395,
#Partially deleted in new
chr11	16854893	17013342	chr11:16854893-17013342	0	-	16854893	16854893	8553170	4	100,112,84,265,	0,909,16205,158184,
#Deleted in new
chr11	16974692	16975013	chr11:16974692-16975013	7	-	16974692	16974692	16724991	1	321,	0,
#Partially deleted in new
chr11	17013997	17052951	chr11:17013997-17052951	7	+	17013997	17013997	16724991	2	370,920,	0,38034,
#Partially deleted in new
chr11	17052024	17053024	chr11:17052024-17053024	5	+	17052024	17052024	16724991	1	1000,	0,
#Partially deleted in new
chr11	17074388	17077666	chr11:17074388-17077666	1	-	17074407	17077641	789624	6	78,67,170,79,49,48,	0,708,1065,2779,3040,3230,
#Partially deleted in new
chr11	17074388	17077787	chr11:17074388-17077787	3	-	17074432	17077641	0	6	78,101,170,79,49,169,	0,708,1065,2779,3040,3230,
#Partially deleted in new
chr11	17074388	17077706	chr11:17074388-17077706	0	-	17074388	17074388	8553170	6	78,101,170,79,45,88,	0,708,1065,2779,3040,3230,
#Partially deleted in new
chr11	17074388	17075612	chr11:17074388-17075612	0	-	17074388	17074388	8553170	2	78,516,	0,708,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	17074388	17076020	chr11:17074388-17076020	0	-	17074388	17074388	8553170	3	78,101,567,	0,708,1065,
#Partially deleted in new
chr11	17074392	17077668	chr11:17074392-17077668	0	-	17074392	17074392	8553170	5	74,101,170,79,240,	0,704,1061,2775,3036,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	17074653	17074744	chr11:17074653-17074744	3	-	17074653	17074653	789624	1	91,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	17075530	17077647	chr11:17075530-17077647	0	-	17075530	17077641	789624	5	93,105,79,49,29,	0,912,1637,1898,2088,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	17075778	17075868	chr11:17075778-17075868	3	-	17075778	17075778	789624	1	90,	0,
#Deleted in new
chr11	17076708	17077667	chr11:17076708-17077667	0	-	17076708	17076708	8553170	2	538,239,	0,720,
#Deleted in new
chr11	17076824	17077715	chr11:17076824-17077715	0	-	17076824	17076824	8553170	3	422,49,97,	0,604,794,
#Deleted in new
chr11	17076954	17077678	chr11:17076954-17077678	0	-	17076954	17076954	8553170	2	523,60,	0,664,
#Partially deleted in new
chr11	17077729	17207920	chr11:17077729-17207920	0	-	17077729	17077729	8553170	13	193,126,110,73,118,208,110,137,130,93,64,158,73,	0,13604,13817,14266,14429,19327,22130,27439,32702,34844,67938,72768,130118,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr11	17086571	17169741	chr11:17086571-17169741	3	-	17089737	17169741	0	32	3349,126,110,73,118,125,208,110,157,170,137,130,93,105,181,95,94,189,146,112,168,123,211,49,144,64,80,112,121,158,104,1065,	0,4762,4975,5424,5587,7689,10485,13288,14706,16090,18597,23860,26002,27789,30919,32073,32648,33214,35616,36130,42728,45344,48247,48539,49910,59096,59291,60945,62095,63926,68954,82105,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	17115651	17115763	chr11:17115651-17115763	3	-	17115651	17115651	8553170	1	112,	0,
#Deleted in new
chr11	17137975	17138265	chr11:17137975-17138265	7	-	17137975	17137975	16724991	1	290,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	17141321	17207947	chr11:17141321-17207947	0	-	17148662	17169741	789624	6	60,549,158,104,1130,100,	0,6917,9176,14204,27355,66526,
#Partially deleted in new
chr11	17169351	17207950	chr11:17169351-17207950	0	-	17169351	17169741	789624	3	455,26,103,	0,25037,38496,
#Partially deleted in new
chr11	17193488	17194308	chr11:17193488-17194308	7	+	17193488	17193488	16724991	2	66,388,	0,432,
#Partially deleted in new
chr11	17194393	17207983	chr11:17194393-17207983	0	-	17194393	17194393	8553170	3	21,69,136,	0,9913,13454,
#Partially deleted in new
chr11	17208152	17295424	chr11:17208152-17295424	0	+	17295323	17295424	789624	3	274,155,101,	0,74636,87171,
#Deleted in new
chr11	17228278	17229151	chr11:17228278-17229151	7	+	17228278	17228278	16724991	1	873,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr11	17260339	17349980	chr11:17260339-17349980	0	+	17295323	17311211	789624	17	162,147,196,155,144,108,127,104,186,99,59,93,90,171,82,187,636,	0,8845,15668,22449,34984,35764,41404,49232,50485,50845,51532,51688,55046,69787,70562,77008,89005,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	17260355	17310937	chr11:17260355-17310937	0	+	17295323	17310937	789624	13	146,94,147,297,196,155,80,126,144,108,127,104,113,	0,7232,8829,15257,15652,22433,26278,30884,34968,35748,41388,49216,50469,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	17260536	17275913	chr11:17260536-17275913	0	+	17260536	17260536	8553170	4	929,190,147,297,	0,7531,8648,15080,
#Partially deleted in new
chr11	17269197	17296166	chr11:17269197-17296166	0	+	17295323	17296166	789624	4	134,155,144,63,	0,13591,26126,26906,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr11	17276010	17331524	chr11:17276010-17331524	0	+	17295323	17317598	789624	15	193,155,144,108,127,104,186,91,59,93,90,123,171,82,113,	0,6778,19313,20093,25733,33561,34814,35182,35861,36017,39375,41573,54116,54891,55401,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	17276730	17282870	chr11:17276730-17282870	0	+	17276730	17276730	8553170	3	98,176,82,	0,1631,6058,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	17276733	17295441	chr11:17276733-17295441	0	+	17295323	17295441	789624	4	115,155,126,118,	0,6055,14506,18590,
#Partially deleted in new
chr11	17276740	17331390	chr11:17276740-17331390	1	+	17295323	17330991	789624	13	88,155,144,108,127,104,186,91,59,93,90,171,489,	0,6048,18583,19363,25003,32831,34084,34452,35131,35287,38645,53386,54161,
#Partially deleted in new
chr11	17276740	17295604	chr11:17276740-17295604	0	+	17276740	17276740	8553170	3	108,155,281,	0,6048,18583,
#Partially deleted in new
chr11	17276740	17296166	chr11:17276740-17296166	0	+	17295323	17296166	789624	5	88,155,84,144,63,	0,6048,9893,18583,19363,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr11	17276764	17332211	chr11:17276764-17332211	3	+	17295323	17331419	789624	14	64,155,144,108,127,104,186,91,59,93,90,171,82,800,	0,6024,18559,19339,24979,32807,34060,34428,35107,35263,38621,53362,54137,54647,
#Partially deleted in new
chr11	17276830	17295425	chr11:17276830-17295425	0	+	17295323	17295425	789624	5	18,155,104,84,102,	0,5958,6630,9803,18493,
#Partially deleted in new
chr11	17276983	17310927	chr11:17276983-17310927	0	+	17295323	17310927	789624	8	112,155,84,144,108,127,104,103,	0,5805,9650,18340,19120,24760,32588,33841,
#Partially deleted in new
chr11	17277022	17301761	chr11:17277022-17301761	0	+	17295323	17301761	789624	5	73,155,144,108,18,	0,5766,18301,19081,24721,
#Partially deleted in new
chr11	17295321	17331523	chr11:17295321-17331523	1	+	17295323	17331419	789624	11	146,108,127,104,186,91,59,93,171,82,112,	0,782,6422,14250,15503,15871,16550,16706,34805,35580,36090,
#Partially deleted in new
chr11	17295321	17331523	chr11:17295321-17331523	1	+	17295323	17331419	789624	12	146,108,127,104,186,91,59,93,90,171,82,112,	0,782,6422,14250,15503,15871,16550,16706,20064,34805,35580,36090,
#Partially deleted in new
chr11	17310919	17331525	chr11:17310919-17331525	0	+	17310919	17331419	789624	7	91,91,59,93,171,82,114,	0,273,952,1108,19207,19982,20492,
#Partially deleted in new
chr11	17311838	17331522	chr11:17311838-17331522	0	+	17311838	17311838	8553170	6	92,93,90,171,82,111,	0,189,3547,18288,19063,19573,
#Partially deleted in new
chr11	17312080	17331516	chr11:17312080-17331516	0	+	17312080	17331419	789624	4	40,90,82,105,	0,3305,18821,19331,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	17332041	17349980	chr11:17332041-17349980	0	+	17332041	17332041	5263520	3	2439,187,636,	0,5306,17303,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	17349052	17351703	chr11:17349052-17351703	3	-	17349052	17349052	8553170	2	446,667,	0,1984,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	17351725	17377341	chr11:17351725-17377341	3	+	17351969	17372512	0	5	314,351,339,98,5336,	0,4925,15283,17141,20280,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	17380648	17383531	chr11:17380648-17383531	3	+	17380648	17380648	8553170	1	2883,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	17385858	17388659	chr11:17385858-17388659	3	-	17386918	17388091	789624	1	2801,	0,
#Partially deleted in new
chr11	17385858	17389331	chr11:17385858-17389331	1	-	17386918	17387830	789624	2	1988,158,	0,3315,
#Deleted in new
chr11	17386062	17386750	chr11:17386062-17386750	0	-	17386062	17386062	8553170	2	250,168,	0,520,
#Partially deleted in new
chr11	17387369	17389085	chr11:17387369-17389085	0	-	17387369	17387830	789624	3	477,59,245,	0,648,1471,
#Partially deleted in new
chr11	17387642	17388872	chr11:17387642-17388872	0	-	17387642	17388872	789624	2	434,32,	0,1198,
#Boundary problem: need 38, got 0, diff 38, mapped 0.0
chr11	17392497	17476844	chr11:17392497-17476844	0	-	17428304	17476776	789624	38	631,63,134,104,109,79,398,114,103,93,158,70,167,242,100,126,138,81,85,99,36,33,106,76,109,106,146,41,163,135,156,165,189,243,167,122,142,216,	0,1199,1768,2674,3112,3354,4418,5186,5841,10163,12014,12996,14124,14390,14856,15894,18018,20168,20896,22014,22806,24432,34551,35369,35791,36067,38316,39706,50222,50680,56018,60621,67990,69085,70940,77603,82388,84131,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr11	17392497	17476807	chr11:17392497-17476807	1	-	17392990	17476776	789624	39	631,63,134,104,109,79,131,121,114,103,93,158,70,167,242,100,126,138,81,85,99,36,33,106,76,183,106,146,41,163,135,156,165,189,243,167,122,142,179,	0,1199,1768,2674,3112,3354,4418,4695,5186,5841,10163,12014,12996,14124,14390,14856,15894,18018,20168,20896,22014,22806,24432,34551,35369,35791,36067,38316,39706,50222,50680,56018,60621,67990,69085,70940,77603,82388,84131,
#Partially deleted in new
chr11	17392884	17476845	chr11:17392884-17476845	1	-	17392990	17476776	0	39	244,63,134,104,109,79,131,121,114,103,93,158,70,167,242,100,126,138,81,85,99,36,36,106,76,117,106,146,41,163,135,156,165,189,243,167,122,142,217,	0,812,1381,2287,2725,2967,4031,4308,4799,5454,9776,11627,12609,13737,14003,14469,15507,17631,19781,20509,21627,22419,24045,34164,34982,35404,35680,37929,39319,49835,50293,55631,60234,67603,68698,70553,77216,82001,83744,
#Partially deleted in new
chr11	17392884	17476845	chr11:17392884-17476845	3	-	17392990	17476776	0	39	244,63,134,104,109,79,131,121,114,103,93,158,70,167,242,100,126,138,81,85,99,36,33,106,76,117,106,146,41,163,135,156,165,189,243,167,122,142,217,	0,812,1381,2287,2725,2967,4031,4308,4799,5454,9776,11627,12609,13737,14003,14469,15507,17631,19781,20509,21627,22419,24045,34164,34982,35404,35680,37929,39319,49835,50293,55631,60234,67603,68698,70553,77216,82001,83744,
#Partially deleted in new
chr11	17392884	17395780	chr11:17392884-17395780	0	-	17392884	17392884	8553170	4	244,63,134,171,	0,812,1381,2725,
#Partially deleted in new
chr11	17392884	17395885	chr11:17392884-17395885	0	-	17395426	17395885	789624	6	244,63,134,299,109,34,	0,812,1381,2287,2725,2967,
#Partially deleted in new
chr11	17392884	17476807	chr11:17392884-17476807	1	-	17392990	17476776	0	39	244,63,134,104,109,79,131,121,114,103,93,158,70,167,242,100,126,138,81,85,99,36,36,106,76,117,106,146,41,163,135,156,165,189,243,167,122,142,179,	0,812,1381,2287,2725,2967,4031,4308,4799,5454,9776,11627,12609,13737,14003,14469,15507,17631,19781,20509,21627,22419,24045,34164,34982,35404,35680,37929,39319,49835,50293,55631,60234,67603,68698,70553,77216,82001,83744,
#Partially deleted in new
chr11	17392893	17461658	chr11:17392893-17461658	0	-	17428656	17461658	789624	32	235,63,134,104,109,79,131,121,114,103,93,158,70,167,322,100,126,138,81,85,99,36,36,106,76,382,163,135,156,165,189,73,	0,803,1372,2278,2716,2958,4022,4299,4790,5445,9767,11618,12600,13728,13994,14460,15498,17622,19772,20500,21618,22410,24036,34155,34973,35395,49826,50284,55622,60225,67594,68692,
#Partially deleted in new
chr11	17392893	17476834	chr11:17392893-17476834	0	-	17431026	17476776	789624	37	235,63,134,109,79,398,114,103,93,158,70,167,242,100,126,138,81,85,99,36,33,106,76,117,106,219,41,163,135,156,165,189,243,167,122,142,206,	0,803,1372,2716,2958,4022,4790,5445,9767,11618,12600,13728,13994,14460,15498,17622,19772,20500,21618,22410,24036,34155,34973,35395,35671,37920,39310,49826,50284,55622,60225,67594,68689,70544,77207,81992,83735,
#Partially deleted in new
chr11	17392896	17476845	chr11:17392896-17476845	0	-	17428696	17476776	789624	36	232,63,134,104,109,1462,114,103,93,158,70,167,288,100,126,138,81,85,99,36,33,106,76,117,138,41,163,135,156,165,189,240,167,122,142,217,	0,800,1369,2275,2713,2955,4787,5442,9764,11615,12597,13725,13991,14457,15495,17619,19769,20497,21615,22407,24033,34152,34970,35392,35668,39307,49823,50281,55619,60222,67591,68689,70541,77204,81989,83732,
#Partially deleted in new
chr11	17392897	17428568	chr11:17392897-17428568	0	-	17392990	17428568	789624	27	231,63,134,104,109,79,101,121,114,103,93,158,70,167,242,100,126,138,81,85,99,36,36,106,76,117,4,	0,799,1368,2274,2712,2954,4018,4295,4786,5441,9763,11614,12596,13724,13990,14456,15494,17618,19768,20496,21614,22406,24032,34151,34969,35391,35667,
#Partially deleted in new
chr11	17392897	17476844	chr11:17392897-17476844	1	-	17392990	17476776	789624	39	231,63,134,104,109,79,101,121,114,103,93,158,70,167,242,100,126,138,81,85,99,36,33,106,76,117,106,146,41,163,135,156,165,189,240,167,122,142,216,	0,799,1368,2274,2712,2954,4018,4295,4786,5441,9763,11614,12596,13724,13990,14456,15494,17618,19768,20496,21614,22406,24032,34151,34969,35391,35667,37916,39306,49822,50280,55618,60221,67590,68688,70540,77203,81988,83731,
#Partially deleted in new
chr11	17392902	17476811	chr11:17392902-17476811	1	-	17392990	17476776	789624	39	226,63,134,104,109,79,131,121,114,103,93,158,70,167,242,100,126,138,81,85,99,36,33,106,76,117,106,146,41,163,135,156,165,189,240,167,122,142,183,	0,794,1363,2269,2707,2949,4013,4290,4781,5436,9758,11609,12591,13719,13985,14451,15489,17613,19763,20491,21609,22401,24027,34146,34964,35386,35662,37911,39301,49817,50275,55613,60216,67585,68683,70535,77198,81983,83726,
#Partially deleted in new
chr11	17392902	17476730	chr11:17392902-17476730	0	-	17392902	17392902	8553170	36	226,63,134,104,1704,114,103,93,158,70,167,242,100,126,138,81,85,99,36,36,106,76,117,106,146,41,163,135,156,165,189,240,167,122,142,102,	0,794,1363,2269,2707,4781,5436,9758,11609,12591,13719,13985,14451,15489,17613,19763,20491,21609,22401,24027,34146,34964,35386,35662,37911,39301,49817,50275,55613,60216,67585,68683,70535,77198,81983,83726,
#Partially deleted in new
chr11	17392902	17476845	chr11:17392902-17476845	1	-	17392990	17476776	789624	39	226,63,134,104,109,79,131,121,114,103,93,158,70,167,242,100,126,138,81,85,99,36,36,106,76,117,106,146,41,163,135,156,165,189,240,167,122,142,217,	0,794,1363,2269,2707,2949,4013,4290,4781,5436,9758,11609,12591,13719,13985,14451,15489,17613,19763,20491,21609,22401,24027,34146,34964,35386,35662,37911,39301,49817,50275,55613,60216,67585,68683,70535,77198,81983,83726,
#Partially deleted in new
chr11	17392902	17476839	chr11:17392902-17476839	0	-	17430214	17476776	789624	38	226,63,134,104,109,79,101,121,103,93,158,70,167,242,100,126,138,81,85,99,36,36,106,76,117,1918,146,41,163,135,156,165,189,240,167,122,142,211,	0,794,1363,2269,2707,2949,4013,4290,5436,9758,11609,12591,13719,13985,14451,15489,17613,19763,20491,21609,22401,24027,34146,34964,35386,35662,37911,39301,49817,50275,55613,60216,67585,68683,70535,77198,81983,83726,
#Partially deleted in new
chr11	17392912	17476845	chr11:17392912-17476845	0	-	17428625	17476776	789624	35	216,63,134,104,29,79,398,114,103,93,158,70,167,242,126,138,81,99,36,36,106,76,117,106,41,163,135,156,165,189,240,167,122,142,217,	0,784,1353,2259,2697,2939,4003,4771,5426,9748,11599,12581,13709,13975,15479,17603,19753,21599,22391,24017,34136,34954,35376,35652,39291,49807,50265,55603,60206,67575,68673,70525,77188,81973,83716,
#Partially deleted in new
chr11	17392913	17476844	chr11:17392913-17476844	1	-	17392990	17476776	789624	37	215,63,134,104,109,79,131,121,114,103,93,158,70,167,242,100,126,138,81,85,99,36,36,106,76,117,41,163,135,156,165,189,243,167,122,142,216,	0,783,1352,2258,2696,2938,4002,4279,4770,5425,9747,11598,12580,13708,13974,14440,15478,17602,19752,20480,21598,22390,24016,34135,34953,35375,39290,49806,50264,55602,60205,67574,68669,70524,77187,81972,83715,
#Partially deleted in new
chr11	17392916	17407412	chr11:17392916-17407412	0	-	17392916	17392916	8553170	14	212,63,134,104,109,79,920,103,93,158,70,167,242,59,	0,780,1349,2255,2693,2935,3961,5422,9744,11595,12577,13705,13971,14437,
#Partially deleted in new
chr11	17392924	17476872	chr11:17392924-17476872	0	-	17428656	17476776	789624	39	204,63,134,104,109,79,131,121,114,103,93,158,70,167,242,100,126,138,81,85,99,36,36,106,76,117,138,146,41,163,135,156,165,189,240,167,122,142,244,	0,772,1341,2247,2685,2927,3991,4268,4759,5414,9736,11587,12569,13697,13963,14429,15467,17591,19741,20469,21587,22379,24005,34124,34942,35364,35640,37889,39279,49795,50253,55591,60194,67563,68661,70513,77176,81961,83704,
#Partially deleted in new
chr11	17392924	17476857	chr11:17392924-17476857	0	-	17432290	17476776	789624	31	56,1050,114,103,93,158,70,167,322,126,138,81,85,99,36,36,106,76,117,138,143,163,135,156,165,189,243,167,122,142,229,	0,3339,4759,5414,9736,11587,12569,13697,13963,15467,17591,19741,20469,21587,22379,24005,34124,34942,35364,35640,39279,49795,50253,55591,60194,67563,68658,70513,77176,81961,83704,
#Partially deleted in new
chr11	17392926	17476760	chr11:17392926-17476760	0	-	17428625	17476760	789624	38	202,63,134,104,109,79,131,121,114,103,93,158,70,167,189,100,126,138,81,85,99,36,33,106,76,117,106,41,163,135,156,165,189,240,167,122,142,132,	0,770,1339,2245,2683,2925,3989,4266,4757,5412,9734,11585,12567,13695,13961,14427,15465,17589,19739,20467,21585,22377,24003,34122,34940,35362,35638,39277,49793,50251,55589,60192,67561,68659,70511,77174,81959,83702,
#Partially deleted in new
chr11	17392926	17397111	chr11:17392926-17397111	0	-	17392926	17392926	8553170	7	202,63,134,186,109,79,196,	0,770,1339,2163,2683,2925,3989,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr11	17392926	17476769	chr11:17392926-17476769	0	-	17432290	17476769	789624	39	202,63,134,104,109,79,398,114,103,93,158,70,167,242,100,126,138,81,85,99,36,33,106,76,117,106,146,143,163,135,156,165,189,243,167,180,122,142,141,	0,770,1339,2245,2683,2925,3989,4757,5412,9734,11585,12567,13695,13961,14427,15465,17589,19739,20467,21585,22377,24003,34122,34940,35362,35638,37887,39277,49793,50251,55589,60192,67561,68656,70511,72471,77174,81959,83702,
#Partially deleted in new
chr11	17392926	17476784	chr11:17392926-17476784	0	-	17432235	17476776	789624	38	202,63,134,104,109,79,131,605,103,93,158,70,167,242,100,103,126,138,81,85,99,36,36,106,76,117,106,146,41,135,156,165,189,240,167,122,142,156,	0,770,1339,2245,2683,2925,3989,4266,5412,9734,11585,12567,13695,13961,14427,15273,15465,17589,19739,20467,21585,22377,24003,34122,34940,35362,35638,37887,39277,50251,55589,60192,67561,68659,70511,77174,81959,83702,
#Partially deleted in new
chr11	17392934	17427919	chr11:17392934-17427919	0	-	17412944	17427919	789624	23	194,134,104,109,79,882,103,93,158,70,167,322,100,126,138,81,104,85,99,36,36,106,53,	0,1331,2237,2675,2917,3981,5404,9726,11577,12559,13687,13953,14419,15457,17581,19731,19939,20459,21577,22369,23995,34114,34932,
#Partially deleted in new
chr11	17392936	17476844	chr11:17392936-17476844	0	-	17407186	17476776	789624	38	192,63,134,104,109,79,398,114,103,93,158,70,167,322,100,126,138,81,85,99,36,36,106,76,117,106,146,41,163,135,156,165,189,240,167,122,142,216,	0,760,1329,2235,2673,2915,3979,4747,5402,9724,11575,12557,13685,13951,14417,15455,17579,19729,20457,21575,22367,23993,34112,34930,35352,35628,37877,39267,49783,50241,55579,60182,67551,68649,70501,77164,81949,83692,
#Partially deleted in new
chr11	17392946	17461689	chr11:17392946-17461689	0	-	17407068	17461689	789624	34	182,63,134,109,79,131,121,114,103,93,158,70,167,189,100,126,138,81,85,99,36,33,106,76,117,76,146,41,163,135,156,165,189,104,	0,750,1319,2663,2905,3969,4246,4737,5392,9714,11565,12547,13675,13941,14407,15445,17569,19719,20447,21565,22357,23983,34102,34920,35342,35618,37867,39257,49773,50231,55569,60172,67541,68639,
#Partially deleted in new
chr11	17392987	17395917	chr11:17392987-17395917	0	-	17395269	17395917	789624	6	141,63,134,104,29,66,	0,709,1278,2184,2622,2864,
#Partially deleted in new
chr11	17393040	17395915	chr11:17393040-17395915	0	-	17393040	17393040	8553170	4	172,63,134,306,	0,656,1225,2569,
#Partially deleted in new
chr11	17393071	17476872	chr11:17393071-17476872	0	-	17428625	17476776	789624	37	57,63,134,104,109,79,398,114,103,93,158,70,167,242,100,126,138,81,85,99,36,36,106,76,117,106,41,163,135,156,165,189,240,167,122,142,244,	0,625,1194,2100,2538,2780,3844,4612,5267,9589,11440,12422,13550,13816,14282,15320,17444,19594,20322,21440,22232,23858,33977,34795,35217,35493,39132,49648,50106,55444,60047,67416,68514,70366,77029,81814,83557,
#Partially deleted in new
chr11	17393075	17407439	chr11:17393075-17407439	0	-	17398435	17407439	789624	16	53,63,134,104,109,79,131,121,114,125,93,158,70,167,242,86,	0,621,1190,2096,2534,2776,3840,4117,4608,5263,9585,11436,12418,13546,13812,14278,
#Partially deleted in new
chr11	17393079	17476852	chr11:17393079-17476852	0	-	17432290	17476776	789624	36	49,63,134,104,109,1462,114,103,93,158,70,167,242,100,126,138,81,85,99,36,36,106,76,117,106,143,163,135,156,165,189,240,146,122,142,224,	0,617,1186,2092,2530,2772,4604,5259,9581,11432,12414,13542,13808,14274,15312,17436,19586,20314,21432,22224,23850,33969,34787,35209,35485,39124,49640,50098,55436,60039,67408,68506,70379,77021,81806,83549,
#Partially deleted in new
chr11	17393107	17476843	chr11:17393107-17476843	0	-	17432235	17476776	789624	31	21,63,134,104,29,1946,103,93,158,70,167,242,126,138,81,85,99,36,36,106,76,117,106,146,41,189,240,167,122,142,215,	0,589,1158,2064,2502,2744,5231,9553,11404,12386,13514,13780,15284,17408,19558,20286,21404,22196,23822,33941,34759,35181,35457,37706,39096,67380,68478,70330,76993,81778,83521,
#Partially deleted in new
chr11	17394286	17476674	chr11:17394286-17476674	0	-	17431026	17476674	789624	37	113,104,109,79,131,121,114,103,93,158,70,167,242,100,126,138,81,85,99,36,36,106,76,117,138,219,41,163,135,156,165,189,243,167,122,142,46,	0,885,1323,1565,2629,2906,3397,4052,8374,10225,11207,12335,12601,13067,14105,16229,18379,19107,20225,21017,22643,32762,33580,34002,34278,36527,37917,48433,48891,54229,58832,66201,67296,69151,75814,80599,82342,
#Deleted in new
chr11	17395912	17397508	chr11:17395912-17397508	0	-	17395912	17395912	8553170	2	18,593,	0,1003,
#Partially deleted in new
chr11	17395920	17404538	chr11:17395920-17404538	0	-	17395920	17404538	789624	7	10,143,121,114,103,93,27,	0,995,1272,1763,2418,6740,8591,
#Partially deleted in new
chr11	17396810	17476819	chr11:17396810-17476819	0	-	17406925	17476776	789624	31	503,114,103,93,158,70,167,242,126,138,81,85,99,36,33,106,76,117,76,146,41,163,135,156,165,189,243,167,122,142,191,	0,873,1528,5850,7701,8683,9811,10077,11581,13705,15855,16583,17701,18493,20119,30238,31056,31478,31754,34003,35393,45909,46367,51705,56308,63677,64772,66627,73290,78075,79818,
#Partially deleted in new
chr11	17396932	17402678	chr11:17396932-17402678	0	-	17397757	17402678	789624	5	84,121,114,103,18,	0,260,751,1406,5728,
#Partially deleted in new
chr11	17396934	17404561	chr11:17396934-17404561	0	-	17396934	17396934	8553170	5	379,114,29,93,50,	0,749,1404,5726,7577,
#Partially deleted in new
chr11	17402734	17407181	chr11:17402734-17407181	0	-	17402734	17402734	8553170	5	19,158,70,167,294,	0,1777,2759,3887,4153,
#Partially deleted in new
chr11	17406447	17476841	chr11:17406447-17476841	0	-	17470217	17476776	0	24	682,100,126,138,81,85,99,36,36,106,76,117,106,146,41,163,135,156,165,189,240,167,122,213,	0,906,1944,4068,6218,6946,8064,8856,10482,20601,21419,21841,22117,24366,25756,36272,36730,42068,46671,54040,55138,56990,63653,70181,
#Partially deleted in new
chr11	17406676	17413552	chr11:17406676-17413552	0	-	17406676	17406676	8553170	7	112,242,100,126,138,81,159,	0,211,677,1715,3839,5989,6717,
#Partially deleted in new
chr11	17406882	17414570	chr11:17406882-17414570	0	-	17406882	17406882	8553170	7	247,100,126,138,81,85,59,	0,471,1509,3633,5783,6511,7629,
#Partially deleted in new
chr11	17408433	17476879	chr11:17408433-17476879	0	-	17432235	17476776	789624	21	84,138,81,85,99,36,33,106,76,117,106,146,41,156,165,189,240,167,122,142,251,	0,2082,4232,4960,6078,6870,8496,18615,19433,19855,20131,22380,23770,40082,44685,52054,53152,55004,61667,66452,68195,
#Partially deleted in new
chr11	17410245	17413536	chr11:17410245-17413536	0	-	17410245	17410245	8553170	3	408,81,58,	0,2420,3233,
#Partially deleted in new
chr11	17410596	17428093	chr11:17410596-17428093	0	-	17410596	17410596	8553170	8	57,81,85,99,36,36,106,227,	0,2069,2797,3915,4707,6333,16452,17270,
#Partially deleted in new
chr11	17427885	17476655	chr11:17427885-17476655	0	-	17428656	17476655	789624	13	57,117,106,41,149,156,165,189,240,167,122,142,27,	0,403,679,4318,15278,20630,25233,32602,33700,35552,42215,47000,48743,
#Partially deleted in new
chr11	17427904	17460548	chr11:17427904-17460548	0	-	17427904	17460548	789624	11	38,117,106,146,41,163,135,120,156,165,61,	0,384,660,2909,4299,14815,15273,16377,20611,25214,32583,
#Partially deleted in new
chr11	17430596	17442791	chr11:17430596-17442791	0	-	17430596	17430596	8553170	3	436,41,72,	0,1607,12123,
#Partially deleted in new
chr11	17430647	17476807	chr11:17430647-17476807	0	-	17430647	17430647	8553170	12	312,41,163,135,156,165,189,240,167,122,142,179,	0,1556,12072,12530,17868,22471,29840,30938,32790,39453,44238,45981,
#Partially deleted in new
chr11	17430821	17443433	chr11:17430821-17443433	0	-	17430821	17430821	8553170	4	138,41,163,256,	0,1382,11898,12356,
#Deleted in new
chr11	17435671	17436181	chr11:17435671-17436181	7	-	17435671	17435671	16724991	1	510,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	17448143	17476844	chr11:17448143-17476844	0	-	17461592	17476776	789624	6	528,165,1338,167,142,216,	0,4975,12344,15294,26742,28485,
#Partially deleted in new
chr11	17470189	17476778	chr11:17470189-17476778	1	-	17470217	17476776	0	2	33,150,	0,6439,
#Partially deleted in new
chr11	17493894	17544416	chr11:17493894-17544416	3	-	17494363	17544307	0	21	482,56,110,100,54,42,74,125,66,143,57,60,85,95,58,25,109,139,144,68,145,	0,2863,4267,7156,7587,8044,23506,26975,27451,28889,29316,29524,30556,32452,32858,33121,33328,37259,37504,39360,50377,
#Partially deleted in new
chr11	17493894	17544402	chr11:17493894-17544402	0	-	17501978	17544307	0	20	482,56,110,100,54,42,125,66,143,57,60,85,95,58,25,109,139,144,68,131,	0,2863,4267,7156,7587,8044,26975,27451,28889,29316,29524,30556,32452,32858,33121,33328,37259,37504,39360,50377,
#Partially deleted in new
chr11	17493896	17533510	chr11:17493896-17533510	1	-	17494363	17533265	0	20	480,56,110,100,54,42,74,125,66,143,57,60,85,95,58,25,109,139,144,256,	0,2861,4265,7154,7585,8042,23504,26973,27449,28887,29314,29522,30554,32450,32856,33119,33326,37257,37502,39358,
#Partially deleted in new
chr11	17493899	17544400	chr11:17493899-17544400	1	-	17494363	17544307	0	20	477,56,110,100,54,42,74,125,66,143,60,85,95,58,25,109,139,144,68,129,	0,2858,4262,7151,7582,8039,23501,26970,27446,28884,29519,30551,32447,32853,33116,33323,37254,37499,39355,50372,
#Deleted in new
chr11	17493899	17495093	chr11:17493899-17495093	0	-	17493899	17493899	8553170	1	1194,	0,
#Partially deleted in new
chr11	17493964	17516622	chr11:17493964-17516622	0	-	17493964	17493964	8553170	7	412,56,110,100,54,42,168,	0,2793,4197,7086,7517,7974,22490,
#Deleted in new
chr11	17494161	17496913	chr11:17494161-17496913	0	-	17494161	17494161	8553170	2	215,156,	0,2596,
#Partially deleted in new
chr11	17494331	17544307	chr11:17494331-17544307	1	-	17494331	17544307	0	27	45,109,56,110,100,54,42,51,120,483,117,153,50,125,66,143,57,60,85,95,58,25,109,139,144,68,36,	0,1237,2426,3830,6719,7150,7607,10315,11498,15024,16073,17570,21909,26538,27014,28452,28879,29087,30119,32015,32421,32684,32891,36822,37067,38923,49940,
#Deleted in new
chr11	17501071	17502049	chr11:17501071-17502049	0	-	17501071	17501071	8553170	3	79,54,111,	0,410,867,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	17514440	17520962	chr11:17514440-17520962	0	-	17514440	17514440	8553170	4	186,50,74,93,	0,1800,2960,6429,
#Partially deleted in new
chr11	17522882	17533874	chr11:17522882-17533874	0	-	17522882	17533787	789624	12	44,57,60,85,95,58,25,109,139,144,68,156,	0,328,536,1568,3464,3870,4133,4340,8271,8516,10372,10836,
#Partially deleted in new
chr11	17547372	17645944	chr11:17547372-17645944	1	+	17547372	17645944	789624	55	174,78,76,93,155,119,206,131,107,110,129,109,47,146,133,178,125,213,193,75,44,154,108,139,135,147,120,117,157,27,168,279,118,80,1769,169,146,90,184,221,139,195,213,105,108,102,99,41,76,179,105,120,46,80,201,	0,762,4627,5746,5992,8406,9745,10812,11165,11679,12161,13336,13718,14289,21783,22840,24707,25705,27347,29183,29495,31000,39101,44077,45820,46237,46674,48665,49478,52298,54837,58484,60923,61757,62282,64789,65247,66239,81760,84329,84715,86307,86696,87471,87707,88237,91078,92050,93372,93540,94474,94754,96088,98191,98371,
#Partially deleted in new
chr11	17547372	17647150	chr11:17547372-17647150	3	+	17547372	17645944	789624	56	94,61,61,76,93,155,119,206,131,107,110,129,109,47,146,133,178,125,213,193,75,44,154,108,139,135,147,120,117,157,27,168,279,118,80,1769,169,146,90,184,221,139,195,213,105,108,102,99,41,76,179,105,120,46,80,1407,	0,554,779,4627,5746,5992,8406,9745,10812,11165,11679,12161,13336,13718,14289,21783,22840,24707,25705,27347,29183,29495,31000,39101,44077,45820,46237,46674,48665,49478,52298,54837,58484,60923,61757,62282,64789,65247,66239,81760,84329,84715,86307,86696,87471,87707,88237,91078,92050,93372,93540,94474,94754,96088,98191,98371,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr11	17547926	17570604	chr11:17547926-17570604	0	+	17547926	17547926	8553170	16	61,61,76,93,155,119,206,131,107,110,129,109,47,146,133,392,	0,225,4073,5192,5438,7852,9191,10258,10611,11125,11607,12782,13164,13735,21229,22286,
#Partially deleted in new
chr11	17548176	17553444	chr11:17548176-17553444	0	+	17548176	17553444	789624	4	36,73,93,80,	0,3826,4942,5188,
#Partially deleted in new
chr11	17555699	17558602	chr11:17555699-17558602	0	+	17555699	17555699	8553170	3	198,206,141,	0,1418,2762,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr11	17578263	17638934	chr11:17578263-17638934	0	+	17578263	17578263	8553170	22	263,108,135,147,120,117,157,168,279,118,80,1769,169,146,90,184,221,139,195,102,99,186,	0,8210,14929,15346,15783,17774,18587,23946,27593,30032,30866,31391,33898,34356,35348,50869,53438,53824,55416,57346,60187,60485,
#Deleted in new
chr11	17695021	17697471	chr11:17695021-17697471	3	+	17695021	17695021	8553170	3	29,70,503,	0,275,1947,
#Deleted in new
chr11	17695052	17697297	chr11:17695052-17697297	0	+	17695052	17695052	8553170	2	314,329,	0,1916,
#Deleted in new
chr11	17695266	17696940	chr11:17695266-17696940	3	-	17695266	17695266	789624	2	434,122,	0,1552,
#Deleted in new
chr11	17719567	17722131	chr11:17719567-17722131	3	+	17719782	17721508	789624	3	845,79,877,	0,1334,1687,
#Partially deleted in new
chr11	17734773	17777830	chr11:17734773-17777830	1	+	17736002	17772630	789624	2	1799,6166,	0,36891,
#Partially deleted in new
chr11	17734788	17783057	chr11:17734788-17783057	3	+	17736002	17781734	789624	4	1784,934,189,1388,	0,36876,44667,46881,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	17736366	17856797	chr11:17736366-17856797	0	+	17736366	17855575	789624	5	206,934,189,136,1271,	0,35298,43089,117176,119160,
#Partially deleted in new
chr11	17765798	17772455	chr11:17765798-17772455	0	+	17765798	17765798	8553170	2	98,791,	0,5866,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	17771937	17853730	chr11:17771937-17853730	0	+	17771937	17781734	789624	4	661,189,232,188,	0,7518,9732,81605,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	17772190	17856787	chr11:17772190-17856787	0	+	17772190	17854805	789624	3	408,136,1986,	0,81352,82611,
#Deleted in new
chr11	17772438	17781918	chr11:17772438-17781918	0	+	17772438	17779467	789624	4	160,62,189,249,	0,1330,7017,9231,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	17772471	17856804	chr11:17772471-17856804	0	+	17772471	17855575	789624	3	127,136,1278,	0,81071,83055,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	17772526	17854007	chr11:17772526-17854007	0	+	17772526	17853682	789624	2	72,465,	0,81016,
#Deleted in new
chr11	17772557	17782516	chr11:17772557-17782516	0	+	17772557	17779652	789624	2	41,3061,	0,6898,
#Deleted in new
chr11	17773550	17779700	chr11:17773550-17779700	0	+	17773550	17773550	8553170	2	280,245,	0,5905,
#Deleted in new
chr11	17773625	17782124	chr11:17773625-17782124	0	+	17773625	17773625	8553170	3	205,189,455,	0,5830,8044,
#Deleted in new
chr11	17779171	17783055	chr11:17779171-17783055	0	+	17779171	17779171	8553170	2	473,1386,	0,2498,
#Partially deleted in new
chr11	17788047	18013162	chr11:17788047-18013162	3	-	17788084	18013010	789624	11	366,37,167,159,63,114,61,95,156,136,212,	0,90160,171422,200549,204883,207748,212449,216393,218543,219893,224903,
#Partially deleted in new
chr11	17788047	18013036	chr11:17788047-18013036	0	-	17918725	18013010	789624	12	366,37,85,167,159,63,114,61,95,156,136,86,	0,90160,130647,171422,200549,204883,207748,212449,216393,218543,219893,224903,
#Partially deleted in new
chr11	17788047	18012898	chr11:17788047-18012898	0	-	17999561	18006600	789624	11	366,37,159,63,114,79,61,95,156,136,48,	0,90160,200549,204883,207748,211446,212449,216393,218543,219893,224803,
#Partially deleted in new
chr11	17788047	17939632	chr11:17788047-17939632	0	-	17788047	17788047	8553170	3	366,37,156,	0,90160,151429,
#Partially deleted in new
chr11	17788047	17874278	chr11:17788047-17874278	0	-	17788047	17788047	8553170	2	366,59,	0,86172,
#Partially deleted in new
chr11	17788048	18013028	chr11:17788048-18013028	1	-	17878221	18013010	789624	10	365,37,159,63,114,61,95,156,136,78,	0,90159,200548,204882,207747,212448,216392,218542,219892,224902,
#Partially deleted in new
chr11	17788051	17863697	chr11:17788051-17863697	0	-	17788051	17788051	8553170	2	362,132,	0,75514,
#Partially deleted in new
chr11	17788051	17995835	chr11:17788051-17995835	0	-	17788051	17788051	8553170	3	362,37,40,	0,90156,207744,
#Partially deleted in new
chr11	17788154	18000804	chr11:17788154-18000804	0	-	17788154	18000804	789624	8	259,37,167,159,63,114,61,38,	0,90053,171315,200442,204776,207641,212342,212612,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	17788195	17995865	chr11:17788195-17995865	0	-	17926757	17995865	789624	7	218,177,37,109,159,63,70,	0,58389,90012,138542,200401,204735,207600,
#Partially deleted in new
chr11	17788248	18004497	chr11:17788248-18004497	0	-	17878221	18004497	789624	6	165,37,63,114,61,57,	0,89959,204682,207547,212248,216192,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	17846561	18012953	chr11:17846561-18012953	1	-	17878221	18006600	789624	10	200,37,159,63,114,61,95,156,136,103,	0,31646,142035,146369,149234,153935,157879,160029,161379,166289,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	17846587	17988757	chr11:17846587-17988757	0	-	17846693	17988757	789624	4	174,37,167,161,	0,31620,112882,142009,
#Partially deleted in new
chr11	17877846	17959623	chr11:17877846-17959623	0	-	17877846	17877846	8553170	3	151,37,154,	0,361,81623,
#Partially deleted in new
chr11	17959452	18012929	chr11:17959452-18012929	0	-	17959452	18006600	789624	9	184,159,63,114,61,95,156,136,428,	0,29144,33478,36343,41044,44988,47138,48488,53049,
#Partially deleted in new
chr11	17988604	18012898	chr11:17988604-18012898	0	-	17988604	18006600	789624	9	151,63,114,61,95,156,136,69,48,	0,4326,7191,11892,15836,17986,19336,21466,24246,
#Partially deleted in new
chr11	17988686	18012924	chr11:17988686-18012924	0	-	17988686	18006600	789624	9	69,63,114,61,95,156,136,65,74,	0,4244,7109,11810,15754,17904,19254,21388,24164,
#Partially deleted in new
chr11	17992949	18012924	chr11:17992949-18012924	0	-	18001947	18006600	789624	8	44,114,61,113,95,156,136,74,	0,2846,7547,8996,11491,13641,14991,19901,
#Partially deleted in new
chr11	17992987	18012918	chr11:17992987-18012918	0	-	18008009	18012918	789624	6	6,114,61,156,136,68,	0,2808,7509,13603,14953,19863,
#Partially deleted in new
chr11	17999545	18012928	chr11:17999545-18012928	0	-	17999545	17999545	8553170	7	27,61,95,156,136,69,78,	0,951,4895,7045,8395,10525,13305,
#Partially deleted in new
chr11	18000523	18013012	chr11:18000523-18013012	0	-	18010076	18013010	789624	6	34,95,156,136,65,62,	0,3917,6067,7417,9551,12427,
#Partially deleted in new
chr11	18000541	18022931	chr11:18000541-18022931	3	-	18000541	18000541	8553170	6	16,95,156,136,151,134,	0,3899,6049,7399,20473,22256,
#Partially deleted in new
chr11	18007940	18010342	chr11:18007940-18010342	0	-	18007940	18007940	8553170	2	136,272,	0,2130,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	18017563	18041325	chr11:18017563-18041325	3	-	18020990	18040762	0	10	3602,134,96,127,136,197,68,101,184,680,	0,5234,6324,8011,8926,11601,11948,15710,18395,23082,
#Partially deleted in new
chr11	18020990	18040762	chr11:18020990-18040762	0	-	18025686	18040762	789624	9	175,134,96,127,136,68,101,184,117,	0,1807,2897,4584,5499,8521,12283,14968,19655,
#Deleted in new
chr11	18021076	18023169	chr11:18021076-18023169	0	-	18021076	18021076	8553170	2	89,372,	0,1721,
#Partially deleted in new
chr11	18029514	18042426	chr11:18029514-18042426	0	-	18029514	18042367	789624	5	65,101,184,143,63,	0,3759,6444,11131,12849,
#Partially deleted in new
chr11	18069934	18081435	chr11:18069934-18081435	0	-	18069934	18069934	8553170	4	226,64,81,25,	0,9684,10476,11476,
#Partially deleted in new
chr11	18080291	18106091	chr11:18080291-18106091	3	-	18080398	18106041	789624	12	200,93,197,189,83,181,116,60,80,84,114,185,	0,1119,3243,6574,6851,9038,9883,10142,11953,16479,22941,25615,
#Partially deleted in new
chr11	18080343	18106082	chr11:18080343-18106082	1	-	18080398	18106041	789624	12	148,93,194,189,83,181,116,60,80,84,114,176,	0,1067,3191,6522,6799,8986,9831,10090,11901,16427,22889,25563,
#Partially deleted in new
chr11	18080344	18090274	chr11:18080344-18090274	0	-	18081417	18090274	789624	5	147,93,83,181,100,	0,1066,6798,8985,9830,
#Partially deleted in new
chr11	18080344	18106087	chr11:18080344-18106087	0	-	18083712	18106041	789624	12	147,93,194,193,83,181,116,60,80,84,114,181,	0,1066,3190,6517,6798,8985,9830,10089,11900,16426,22888,25562,
#Partially deleted in new
chr11	18080344	18092324	chr11:18080344-18092324	0	-	18081417	18092324	789624	8	147,93,189,83,181,116,60,80,	0,1066,6521,6798,8985,9830,10089,11900,
#Partially deleted in new
chr11	18080344	18086960	chr11:18080344-18086960	0	-	18080344	18080344	8553170	4	147,93,175,95,	0,1066,3190,6521,
#Deleted in new
chr11	18080347	18081737	chr11:18080347-18081737	0	-	18080347	18080347	8553170	2	144,327,	0,1063,
#Partially deleted in new
chr11	18080348	18106019	chr11:18080348-18106019	0	-	18080398	18106019	789624	5	143,93,12,90,113,	0,1062,3186,22908,25558,
#Partially deleted in new
chr11	18080372	18106087	chr11:18080372-18106087	1	-	18080398	18106041	789624	12	119,93,194,198,83,181,116,60,80,84,114,181,	0,1038,3162,6484,6770,8957,9802,10061,11872,16398,22860,25534,
#Partially deleted in new
chr11	18083214	18087206	chr11:18083214-18087206	0	-	18083214	18083214	8553170	3	517,189,64,	0,3651,3928,
#Partially deleted in new
chr11	18089351	18106071	chr11:18089351-18106071	0	-	18089351	18089351	8553170	7	159,142,60,80,84,114,165,	0,823,1082,2893,7419,13881,16555,
#Partially deleted in new
chr11	18089437	18106069	chr11:18089437-18106069	0	-	18089437	18106041	789624	7	73,87,56,80,84,114,163,	0,737,996,2807,7333,13795,16469,
#Partially deleted in new
chr11	18089495	18090936	chr11:18089495-18090936	0	-	18089495	18089495	8553170	3	15,142,503,	0,679,938,
#Partially deleted in new
chr11	18093799	18106085	chr11:18093799-18106085	0	-	18093799	18093799	8553170	4	166,84,114,179,	0,2971,9433,12107,
#Deleted in new
chr11	18106582	18106841	chr11:18106582-18106841	7	+	18106582	18106582	16724991	1	259,	0,
#Partially deleted in new
chr11	18112471	18116132	chr11:18112471-18116132	7	-	18112471	18112471	16724991	3	284,211,147,	0,605,3514,
#Partially deleted in new
chr11	18112625	18116078	chr11:18112625-18116078	5	-	18112625	18112625	16724991	3	136,141,88,	0,526,3365,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	18120954	18138480	chr11:18120954-18138480	3	+	18137202	18138171	789624	3	210,126,1303,	0,11659,16223,
#Partially deleted in new
chr11	18132511	18137940	chr11:18132511-18137940	0	+	18137202	18137940	789624	2	228,763,	0,4666,
#Partially deleted in new
chr11	18132611	18138478	chr11:18132611-18138478	1	+	18137202	18138171	789624	2	128,1301,	0,4566,
#Partially deleted in new
chr11	18140185	18189495	chr11:18140185-18189495	3	-	18140185	18140185	8553170	2	426,601,	0,48709,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	18142340	18145142	chr11:18142340-18145142	3	+	18142340	18142340	8553170	2	1331,1384,	0,1418,
#Deleted in new
chr11	18153276	18154255	chr11:18153276-18154255	7	+	18153276	18153276	16724991	1	979,	0,
#Deleted in new
chr11	18172836	18174280	chr11:18172836-18174280	3	+	18173256	18174225	789624	1	1444,	0,
#Deleted in new
chr11	18188999	18189621	chr11:18188999-18189621	7	+	18188999	18188999	16724991	1	622,	0,
#Deleted in new
chr11	18196656	18197337	chr11:18196656-18197337	7	+	18196656	18196656	16724991	1	681,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	18209137	18213562	chr11:18209137-18213562	5	+	18209137	18209137	16724991	3	56,1185,482,	0,348,3943,
#Deleted in new
chr11	18209142	18211508	chr11:18209142-18211508	4	+	18209142	18209142	16724991	2	51,2023,	0,343,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	18209207	18214562	chr11:18209207-18214562	7	+	18209207	18209207	16724991	2	1463,1482,	0,3873,
#Deleted in new
chr11	18209692	18210541	chr11:18209692-18210541	5	+	18209692	18209692	16724991	1	849,	0,
#Partially deleted in new
chr11	18231348	18236893	chr11:18231348-18236893	3	-	18231501	18235926	789624	4	316,139,95,177,	0,1046,4487,5368,
#Partially deleted in new
chr11	18231422	18248635	chr11:18231422-18248635	3	-	18231501	18248011	789624	6	242,139,95,139,95,33,	0,972,4413,14487,16498,17180,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	18239222	18248643	chr11:18239222-18248643	1	-	18239947	18248011	789624	4	747,139,95,41,	0,6687,8698,9380,
#Partially deleted in new
chr11	18240202	18248019	chr11:18240202-18248019	1	-	18240274	18248011	789624	3	85,139,99,	0,5707,7718,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	18242138	18248635	chr11:18242138-18248635	1	-	18242707	18248011	789624	4	681,139,95,33,	0,3771,5782,6464,
#Partially deleted in new
chr11	18245227	18248643	chr11:18245227-18248643	3	-	18245376	18248011	789624	4	288,139,95,41,	0,682,2693,3375,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	18245237	18248639	chr11:18245237-18248639	1	-	18245376	18248011	789624	5	278,139,95,61,37,	0,672,2683,3218,3365,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	18245242	18248635	chr11:18245242-18248635	1	-	18245376	18248011	789624	4	273,139,95,180,	0,667,2678,3213,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	18248388	18248506	chr11:18248388-18248506	7	-	18248388	18248388	16724991	1	118,	0,
#Deleted in new
chr11	18261981	18263091	chr11:18261981-18263091	7	+	18261981	18261981	16724991	1	1110,	0,
#Partially deleted in new
chr11	18266173	18269974	chr11:18266173-18269974	3	+	18266887	18269855	789624	4	123,95,139,258,	0,710,3021,3543,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	18266259	18269967	chr11:18266259-18269967	1	+	18266887	18269855	789624	5	37,61,95,139,251,	0,123,624,2935,3457,
#Partially deleted in new
chr11	18266260	18269962	chr11:18266260-18269962	1	+	18266887	18269337	8553170	4	36,95,170,246,	0,623,2934,3456,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	18266263	18269977	chr11:18266263-18269977	1	+	18266887	18269855	789624	4	180,95,139,261,	0,620,2931,3453,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	18266392	18266510	chr11:18266392-18266510	7	+	18266392	18266392	16724991	1	118,	0,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr11	18278667	18322174	chr11:18278667-18322174	1	-	18279881	18310875	789624	22	1275,271,107,114,120,156,121,578,78,150,124,187,159,179,89,72,213,134,193,65,111,229,	0,3282,5127,6678,7923,8867,9225,12774,14231,16352,17331,18130,18891,20124,22160,26754,27467,30278,32073,32719,33246,43278,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr11	18279058	18322174	chr11:18279058-18322174	3	-	18279881	18317858	789624	23	884,271,107,114,120,156,121,578,78,150,124,187,159,179,89,72,213,134,193,65,111,157,229,	0,2891,4736,6287,7532,8476,8834,12383,13840,15961,16940,17739,18500,19733,21769,26363,27076,29887,31682,32328,32855,38692,42887,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr11	18279058	18322174	chr11:18279058-18322174	1	-	18279881	18310875	789624	22	884,271,107,114,120,156,121,578,78,150,124,187,159,179,89,72,213,134,193,65,111,42,	0,2891,4736,6287,7532,8476,8834,12383,13840,15961,16940,17739,18500,19733,21769,26363,27076,29887,31682,32328,32855,43074,
#Partially deleted in new
chr11	18281913	18296101	chr11:18281913-18296101	0	-	18281913	18281913	8553170	8	307,107,120,156,121,578,150,103,	0,1881,4677,5621,5979,9528,13106,14085,
#Partially deleted in new
chr11	18283792	18291942	chr11:18283792-18291942	0	-	18283792	18283792	8553170	6	109,114,120,156,121,501,	0,1553,2798,3742,4100,7649,
#Partially deleted in new
chr11	18285372	18296045	chr11:18285372-18296045	0	-	18285372	18288011	789624	7	87,120,156,121,78,150,47,	0,1218,2162,2520,7526,9647,10626,
#Partially deleted in new
chr11	18287890	18296045	chr11:18287890-18296045	0	-	18287890	18287890	8553170	3	123,150,47,	0,7129,8108,
#Partially deleted in new
chr11	18296161	18322198	chr11:18296161-18322198	1	-	18296762	18310875	789624	11	823,159,179,89,72,213,134,193,65,111,122,	0,1397,2630,4666,9260,9973,12784,14579,15225,15752,25915,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	18311516	18322178	chr11:18311516-18322178	0	-	18311516	18311516	8553170	3	508,157,46,	0,6234,10616,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	18311955	18322088	chr11:18311955-18322088	0	-	18311955	18311955	8553170	4	69,116,157,143,	0,2448,5795,9990,
#Partially deleted in new
chr11	18322294	18366261	chr11:18322294-18366261	1	+	18333074	18365869	0	16	446,207,169,193,166,94,150,80,128,88,89,118,91,116,93,479,	0,3652,10765,13459,15814,17269,18966,19233,25293,25537,29586,30034,35657,36230,38320,43488,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	18322546	18335904	chr11:18322546-18335904	0	+	18322546	18322546	8553170	4	194,61,169,151,	0,1689,10513,13207,
#Partially deleted in new
chr11	18322556	18360770	chr11:18322556-18360770	0	+	18322556	18322556	8553170	14	184,169,193,166,94,150,80,128,88,89,118,91,116,156,	0,10503,13197,15552,17007,18704,18971,25031,25275,29324,29772,35395,35968,38058,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	18322566	18333183	chr11:18322566-18333183	0	+	18322566	18322566	8553170	4	174,61,207,124,	0,1669,3380,10493,
#Partially deleted in new
chr11	18322566	18366813	chr11:18322566-18366813	1	+	18338109	18365869	0	14	174,169,166,94,150,80,128,88,89,118,91,116,93,1031,	0,10493,15542,16997,18694,18961,25021,25265,29314,29762,35385,35958,38048,43216,
#Partially deleted in new
chr11	18322567	18333454	chr11:18322567-18333454	0	+	18322567	18322567	8553170	2	173,395,	0,10492,
#Partially deleted in new
chr11	18322568	18335884	chr11:18322568-18335884	0	+	18333074	18335884	789624	4	172,73,169,131,	0,3378,10491,13185,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	18322581	18333609	chr11:18322581-18333609	0	+	18322581	18322581	8553170	3	159,61,550,	0,1654,10478,
#Partially deleted in new
chr11	18322595	18367044	chr11:18322595-18367044	3	+	18333074	18365869	0	15	145,169,193,166,94,150,80,128,88,89,118,91,116,93,1262,	0,10464,13158,15513,16968,18665,18932,24992,25236,29285,29733,35356,35929,38019,43187,
#Partially deleted in new
chr11	18332661	18341608	chr11:18332661-18341608	0	+	18332661	18332661	8553170	6	567,193,166,94,150,81,	0,3092,5447,6902,8599,8866,
#Partially deleted in new
chr11	18338216	18348831	chr11:18338216-18348831	1	+	18341265	18348024	789624	6	58,94,150,80,128,1000,	0,1347,3044,3311,9371,9615,
#Partially deleted in new
chr11	18341408	18341958	chr11:18341408-18341958	0	+	18341408	18341408	8553170	1	550,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	18347103	18366275	chr11:18347103-18366275	1	+	18347686	18365869	789624	8	612,88,89,118,91,116,93,493,	0,728,4777,5225,10848,11421,13511,18679,
#Partially deleted in new
chr11	18351571	18365898	chr11:18351571-18365898	1	+	18352416	18365869	789624	6	398,118,91,116,93,116,	0,757,6380,6953,9043,14211,
#Partially deleted in new
chr11	18352017	18358102	chr11:18352017-18358102	0	+	18352017	18352017	8553170	2	429,151,	0,5934,
#Partially deleted in new
chr11	18352097	18358642	chr11:18352097-18358642	0	+	18352097	18352097	8553170	3	349,91,118,	0,5854,6427,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	18387786	18387860	chr11:18387786-18387860	3	+	18387786	18387786	5263520	1	74,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	18394387	18408425	chr11:18394387-18408425	3	+	18396842	18407281	0	8	249,150,118,174,174,118,124,1309,	0,2431,5043,6449,8452,9306,11061,12729,
#Partially deleted in new
chr11	18394559	18402891	chr11:18394559-18402891	0	+	18396842	18402891	789624	5	82,150,118,174,52,	0,2259,4871,6277,8280,
#Deleted in new
chr11	18394560	18397398	chr11:18394560-18397398	0	+	18394560	18394560	8553170	2	76,580,	0,2258,
#Partially deleted in new
chr11	18394561	18408218	chr11:18394561-18408218	1	+	18396842	18407376	0	7	75,150,118,174,174,95,980,	0,2257,4869,6275,8278,9132,12677,
#Partially deleted in new
chr11	18394561	18407667	chr11:18394561-18407667	1	+	18396842	18407281	0	7	75,150,118,174,118,124,551,	0,2257,4869,8278,9132,10887,12555,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	18394561	18400872	chr11:18394561-18400872	0	+	18396842	18398800	789624	5	75,150,191,118,36,	0,2257,4236,4869,6275,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	18394562	18400360	chr11:18394562-18400360	0	+	18394562	18394562	8553170	3	74,150,930,	0,2256,4868,
#Partially deleted in new
chr11	18394562	18399521	chr11:18394562-18399521	0	+	18396842	18399521	789624	4	74,150,150,91,	0,561,2256,4868,
#Partially deleted in new
chr11	18394562	18403811	chr11:18394562-18403811	0	+	18396842	18402851	789624	4	74,150,174,118,	0,2256,8277,9131,
#Partially deleted in new
chr11	18394562	18400934	chr11:18394562-18400934	0	+	18396842	18400670	789624	5	74,150,118,116,98,	0,2256,4868,6067,6274,
#Partially deleted in new
chr11	18394562	18407158	chr11:18394562-18407158	0	+	18396842	18403763	789624	6	74,150,118,74,124,42,	0,2256,4868,9175,10886,12554,
#Partially deleted in new
chr11	18394562	18403759	chr11:18394562-18403759	0	+	18396842	18400935	789624	5	74,136,104,174,66,	0,2256,6344,8277,9131,
#Partially deleted in new
chr11	18394562	18407642	chr11:18394562-18407642	0	+	18396842	18400848	789624	7	74,150,174,174,118,124,526,	0,2256,6274,8277,9131,10886,12554,
#Partially deleted in new
chr11	18394585	18408218	chr11:18394585-18408218	1	+	18396842	18407132	0	7	51,150,118,174,174,118,1102,	0,2233,4845,6251,8254,9108,12531,
#Partially deleted in new
chr11	18394611	18401025	chr11:18394611-18401025	0	+	18396842	18401025	789624	4	275,150,118,189,	0,2207,4819,6225,
#Partially deleted in new
chr11	18394703	18400936	chr11:18394703-18400936	0	+	18396842	18400936	789624	5	183,131,150,118,100,	0,1776,2115,4727,6133,
#Partially deleted in new
chr11	18396265	18408218	chr11:18396265-18408218	1	+	18396547	18407281	0	8	345,150,118,174,174,118,124,1102,	0,553,3165,4571,6574,7428,9183,10851,
#Partially deleted in new
chr11	18396277	18407847	chr11:18396277-18407847	1	+	18396842	18407281	0	8	333,150,118,174,174,118,124,731,	0,541,3153,4559,6562,7416,9171,10839,
#Partially deleted in new
chr11	18396553	18407281	chr11:18396553-18407281	1	+	18396842	18407281	0	7	415,118,174,174,118,124,165,	0,2877,4283,6286,7140,8895,10563,
#Partially deleted in new
chr11	18396817	18405495	chr11:18396817-18405495	0	+	18396842	18400848	789624	5	151,174,174,118,47,	0,4019,6022,6876,8631,
#Partially deleted in new
chr11	18396842	18400935	chr11:18396842-18400935	1	+	18396842	18400935	789624	2	112,29,	0,4064,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	18398629	18405574	chr11:18398629-18405574	0	+	18398629	18398629	8553170	5	919,174,174,118,126,	0,2207,4210,5064,6819,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	18398865	18403784	chr11:18398865-18403784	0	+	18398865	18398865	8553170	5	123,118,174,174,91,	0,565,1971,3974,4828,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	18399725	18407584	chr11:18399725-18407584	0	+	18399725	18399725	8553170	5	1285,174,118,124,468,	0,3114,3968,5723,7391,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	18402534	18407740	chr11:18402534-18407740	0	+	18402534	18402534	8553170	4	479,118,124,624,	0,1159,2914,4582,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	18405608	18406731	chr11:18405608-18406731	3	+	18405608	18405608	8553170	2	190,80,	0,1043,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	18412306	18452058	chr11:18412306-18452058	3	+	18412717	18451127	789624	8	102,135,118,174,174,118,124,1096,	0,402,2877,17430,22433,26221,33903,38656,
#Partially deleted in new
chr11	18412322	18451243	chr11:18412322-18451243	0	+	18412717	18429766	789624	7	86,135,174,174,118,124,281,	0,386,17414,22417,26205,33887,38640,
#Partially deleted in new
chr11	18412330	18451243	chr11:18412330-18451243	1	+	18412717	18451127	789624	8	132,135,118,174,174,118,124,281,	0,378,2853,17406,22409,26197,33879,38632,
#Partially deleted in new
chr11	18412359	18451243	chr11:18412359-18451243	0	+	18412717	18434751	789624	6	49,135,174,118,124,281,	0,349,22380,26168,33850,38603,
#Partially deleted in new
chr11	18412359	18451243	chr11:18412359-18451243	0	+	18412717	18429766	789624	5	49,135,174,174,281,	0,349,17377,22380,38603,
#Partially deleted in new
chr11	18412717	18451127	chr11:18412717-18451127	1	+	18412717	18451048	789624	5	126,118,174,174,165,	0,2466,17019,22022,38245,
#Partially deleted in new
chr11	18412717	18451127	chr11:18412717-18451127	1	+	18412717	18451127	789624	7	126,118,132,174,118,124,165,	0,2466,17061,22022,25810,33492,38245,
#Partially deleted in new
chr11	18412717	18451127	chr11:18412717-18451127	1	+	18412717	18451048	789624	4	126,118,174,165,	0,2466,17019,38245,
#Partially deleted in new
chr11	18412717	18451127	chr11:18412717-18451127	1	+	18412717	18450978	789624	6	126,118,174,174,118,165,	0,2466,17019,22022,25810,38245,
#Partially deleted in new
chr11	18412717	18451127	chr11:18412717-18451127	1	+	18412717	18450978	789624	5	126,118,174,118,165,	0,2466,22022,25810,38245,
#Deleted in new
chr11	18450111	18450868	chr11:18450111-18450868	7	-	18450111	18450111	16724991	1	757,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	18455823	18479323	chr11:18455823-18479323	1	+	18456680	18478870	789624	8	255,135,118,174,174,118,124,618,	0,848,8137,9813,19642,20560,21796,22882,
#Partially deleted in new
chr11	18455823	18477688	chr11:18455823-18477688	1	+	18456680	18476494	789624	8	255,135,118,174,174,104,13,69,	0,848,8137,9813,19642,20560,20665,21796,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	18455883	18479600	chr11:18455883-18479600	3	+	18456680	18478870	789624	7	923,118,174,174,118,124,895,	0,8077,9753,19582,20500,21736,22822,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	18468335	18526951	chr11:18468335-18526951	1	-	18469203	18526816	789624	10	883,240,203,92,67,124,164,66,85,177,	0,13294,15534,34150,38521,41206,46342,47763,51183,58439,
#Partially deleted in new
chr11	18469030	18481731	chr11:18469030-18481731	0	-	18480545	18481731	789624	3	188,151,102,	0,11454,12599,
#Partially deleted in new
chr11	18475218	18481771	chr11:18475218-18481771	0	-	18480545	18481771	789624	4	498,144,128,142,	0,4684,5289,6411,
#Partially deleted in new
chr11	18480310	18527232	chr11:18480310-18527232	3	-	18480545	18526816	0	10	325,240,203,92,67,124,164,66,85,458,	0,1319,3559,22175,26546,29231,34367,35788,39208,46464,
#Partially deleted in new
chr11	18481490	18484061	chr11:18481490-18484061	0	-	18481490	18481490	8553170	2	379,192,	0,2379,
#Partially deleted in new
chr11	18483835	18526913	chr11:18483835-18526913	0	-	18483835	18483835	8553170	6	237,92,164,66,85,139,	0,18650,30842,32263,35683,42939,
#Partially deleted in new
chr11	18483935	18514850	chr11:18483935-18514850	0	-	18483935	18483935	8553170	5	137,92,67,124,173,	0,18550,22921,25606,30742,
#Deleted in new
chr11	18490242	18490955	chr11:18490242-18490955	7	-	18490242	18490242	16724991	1	713,	0,
#Partially deleted in new
chr11	18490829	18514843	chr11:18490829-18514843	0	-	18490829	18490829	8553170	5	265,92,67,124,166,	0,11656,16027,18712,23848,
#Partially deleted in new
chr11	18502484	18526881	chr11:18502484-18526881	0	-	18502484	18502484	8553170	4	93,67,124,107,	0,4372,7057,24290,
#Partially deleted in new
chr11	18502542	18526899	chr11:18502542-18526899	0	-	18502542	18502542	8553170	6	35,67,124,164,66,125,	0,4314,6999,12135,13556,24232,
#Partially deleted in new
chr11	18506856	18526821	chr11:18506856-18526821	0	-	18506856	18506856	8553170	4	67,124,66,47,	0,2685,9242,19918,
#Partially deleted in new
chr11	18506865	18526920	chr11:18506865-18526920	0	-	18506865	18506865	8553170	7	58,124,164,66,85,42,146,	0,2676,7812,9233,12653,18795,19909,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	18507607	18508820	chr11:18507607-18508820	3	-	18507607	18507607	8553170	2	293,337,	0,876,
#Deleted in new
chr11	18511042	18511475	chr11:18511042-18511475	7	-	18511042	18511042	16724991	1	433,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	18529608	18588683	chr11:18529608-18588683	3	-	18532319	18588654	0	12	2879,124,64,174,171,103,119,136,164,66,85,71,	0,4721,6797,15014,17271,28619,35283,36738,40605,45738,49115,59004,
#Partially deleted in new
chr11	18531200	18588746	chr11:18531200-18588746	1	-	18532471	18588654	0	11	1287,64,174,171,103,119,136,164,66,85,134,	0,5205,13422,15679,27027,33691,35146,39013,44146,47523,57412,
#Partially deleted in new
chr11	18531676	18588674	chr11:18531676-18588674	0	-	18531676	18531676	8553170	10	811,124,64,174,171,103,119,136,66,62,	0,2653,4729,12946,15203,26551,33215,34670,43670,56936,
#Partially deleted in new
chr11	18531697	18579518	chr11:18531697-18579518	1	-	18532471	18578736	0	11	790,64,174,171,103,119,136,164,66,85,91,	0,4708,12925,15182,26530,33194,34649,38516,43649,47026,47730,
#Partially deleted in new
chr11	18531778	18588686	chr11:18531778-18588686	1	-	18532471	18588654	0	10	709,64,174,171,103,119,136,164,85,74,	0,4627,12844,15101,26449,33113,34568,38435,46945,56834,
#Partially deleted in new
chr11	18531873	18588706	chr11:18531873-18588706	1	-	18532319	18588654	0	11	614,124,64,174,171,103,119,136,164,85,94,	0,2456,4532,12749,15006,26354,33018,34473,38340,46850,56739,
#Partially deleted in new
chr11	18532280	18588717	chr11:18532280-18588717	0	-	18566477	18588654	789624	11	207,124,64,174,171,103,119,136,66,85,105,	0,2049,4125,12342,14599,25947,32611,34066,43066,46443,56332,
#Partially deleted in new
chr11	18532384	18588717	chr11:18532384-18588717	1	-	18532476	18588654	0	7	103,174,103,119,66,85,105,	0,12238,25843,32507,42962,46339,56228,
#Partially deleted in new
chr11	18532405	18536764	chr11:18532405-18536764	0	-	18532405	18532405	8553170	3	82,124,359,	0,1924,4000,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	18538884	18539189	chr11:18538884-18539189	3	+	18538884	18538884	8553170	1	305,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	18563645	18588681	chr11:18563645-18588681	1	-	18563965	18588654	0	7	356,119,136,164,66,85,69,	0,1246,2701,6568,11701,15078,24967,
#Partially deleted in new
chr11	18564894	18588681	chr11:18564894-18588681	0	-	18564894	18564894	8553170	5	116,136,164,66,69,	0,1452,5319,10452,23718,
#Partially deleted in new
chr11	18569897	18588705	chr11:18569897-18588705	0	-	18569897	18569897	8553170	4	480,66,85,93,	0,5449,8826,18715,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	18588780	18603918	chr11:18588780-18603918	0	+	18588780	18588780	8553170	4	215,93,38,147,	0,6836,14377,14991,
#Partially deleted in new
chr11	18595458	18599683	chr11:18595458-18599683	7	-	18595458	18595458	16724991	3	191,126,253,	0,711,3972,
#Deleted in new
chr11	18595628	18596571	chr11:18595628-18596571	5	-	18595628	18595628	16724991	1	943,	0,
#Partially deleted in new
chr11	18595903	18599594	chr11:18595903-18599594	4	-	18595903	18595903	16724991	2	392,164,	0,3527,
#Partially deleted in new
chr11	18599786	18603822	chr11:18599786-18603822	3	+	18599928	18603822	789624	4	211,73,38,51,	0,1305,3371,3985,
#Partially deleted in new
chr11	18599786	18603883	chr11:18599786-18603883	1	+	18599928	18603179	789624	4	211,89,38,112,	0,1305,3371,3985,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	18599788	18601764	chr11:18599788-18601764	1	+	18599928	18601502	789624	3	209,73,291,	0,1303,1685,
#Partially deleted in new
chr11	18599803	18610255	chr11:18599803-18610255	0	+	18599928	18603179	789624	5	194,89,38,98,1018,	0,1288,3354,3968,9434,
#Deleted in new
chr11	18601881	18602649	chr11:18601881-18602649	3	+	18601881	18601881	8553170	1	768,	0,
#Partially deleted in new
chr11	18602976	18609773	chr11:18602976-18609773	1	+	18603123	18603822	789624	3	219,98,536,	0,795,6261,
#Deleted in new
chr11	18602986	18603893	chr11:18602986-18603893	1	+	18603123	18603822	789624	2	209,122,	0,785,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	18606400	18634493	chr11:18606400-18634493	3	-	18609860	18634257	0	6	3554,78,175,1536,115,296,	0,5076,5913,8162,10474,27797,
#Partially deleted in new
chr11	18612164	18634389	chr11:18612164-18634389	0	-	18612164	18612164	8553170	4	324,1536,115,192,	0,2398,4710,22033,
#Partially deleted in new
chr11	18615772	18634791	chr11:18615772-18634791	0	-	18615772	18615772	8553170	3	326,115,102,	0,1102,18917,
#Deleted in new
chr11	18665049	18665548	chr11:18665049-18665548	7	+	18665049	18665049	16724991	1	499,	0,
#Partially deleted in new
chr11	18693121	18701728	chr11:18693121-18701728	0	+	18693121	18693121	8553170	3	256,265,156,	0,7811,8451,
#Deleted in new
chr11	18698778	18701115	chr11:18698778-18701115	0	+	18698778	18698778	8553170	3	129,239,183,	0,1032,2154,
#Deleted in new
chr11	18698790	18704785	chr11:18698790-18704785	3	+	18698886	18702009	789624	3	117,265,3213,	0,2142,2782,
#Deleted in new
chr11	18698803	18701154	chr11:18698803-18701154	0	+	18698803	18698803	8553170	3	104,232,222,	0,1014,2129,
#Deleted in new
chr11	18700593	18701699	chr11:18700593-18701699	0	+	18700593	18700593	8553170	3	141,265,127,	0,339,979,
#Partially deleted in new
chr11	18704304	18726180	chr11:18704304-18726180	3	-	18704467	18724236	789624	23	234,330,300,193,89,297,129,174,303,297,142,125,285,273,163,114,178,40,100,137,132,142,107,	0,1512,2609,3499,3902,5082,6022,6350,7777,9547,9972,10195,11127,12423,13626,14310,15411,15759,15881,17230,17605,19823,21769,
#Partially deleted in new
chr11	18704311	18726230	chr11:18704311-18726230	0	-	18707979	18724236	789624	21	227,330,300,193,297,129,174,297,142,125,285,273,163,114,178,40,100,137,132,142,157,	0,1505,2602,3492,5075,6015,6343,9540,9965,10188,11120,12416,13619,14303,15404,15752,15874,17223,17598,19816,21762,
#Deleted in new
chr11	18705417	18706129	chr11:18705417-18706129	0	-	18705417	18705417	8553170	2	200,313,	0,399,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	18706536	18740568	chr11:18706536-18740568	3	+	18706536	18706536	8553170	3	613,116,145,	0,741,33887,
#Partially deleted in new
chr11	18707040	18726181	chr11:18707040-18726181	0	-	18707040	18707040	8553170	20	173,193,89,297,502,303,297,142,125,285,273,163,114,178,40,100,137,132,142,108,	0,763,1166,2346,3286,5041,6811,7236,7459,8391,9687,10890,11574,12675,13023,13145,14494,14869,17087,19033,
#Partially deleted in new
chr11	18721801	18726174	chr11:18721801-18726174	0	-	18721801	18721801	8553170	3	240,142,101,	0,2326,4272,
#Partially deleted in new
chr11	18727927	18791842	chr11:18727927-18791842	1	-	18728933	18771958	0	15	1100,114,161,111,138,80,85,190,242,84,108,194,77,133,318,	0,1525,1730,4664,5307,5628,9952,12675,14334,15064,15394,16078,37879,44011,63597,
#Partially deleted in new
chr11	18727927	18743842	chr11:18727927-18743842	1	-	18728933	18742398	789624	11	1100,114,161,111,138,80,85,190,242,84,521,	0,1525,1730,4664,5307,5628,9952,12675,14334,15064,15394,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	18727929	18730744	chr11:18727929-18730744	1	-	18728933	18729965	789624	3	1098,114,1087,	0,1523,1728,
#Partially deleted in new
chr11	18727929	18792721	chr11:18727929-18792721	1	-	18728933	18771958	0	15	1098,114,161,111,138,80,85,190,242,84,12,194,77,88,1197,	0,1523,1728,4662,5305,5626,9950,12673,14332,15062,15392,16076,37877,44009,63595,
#Partially deleted in new
chr11	18727931	18791640	chr11:18727931-18791640	3	-	18728933	18765831	0	14	1096,114,161,111,138,80,85,190,242,84,108,194,77,116,	0,1521,1726,4660,5303,5624,9948,12671,14330,15060,15390,16074,37875,63593,
#Deleted in new
chr11	18740767	18744343	chr11:18740767-18744343	0	-	18740767	18740767	8553170	5	25,242,84,108,338,	0,1494,2224,2554,3238,
#Deleted in new
chr11	18836303	18837081	chr11:18836303-18837081	7	+	18836303	18836303	16724991	1	778,	0,
#Partially deleted in new
chr11	18863557	18864509	chr11:18863557-18864509	7	-	18863557	18863557	16724991	1	952,	0,
#Partially deleted in new
chr11	18870988	18873462	chr11:18870988-18873462	7	-	18870988	18870988	16724991	2	1108,610,	0,1864,
#Deleted in new
chr11	18886932	18887920	chr11:18886932-18887920	7	-	18886932	18886932	16724991	1	988,	0,
#Deleted in new
chr11	18910435	18911396	chr11:18910435-18911396	7	-	18910435	18910435	16724991	1	961,	0,
#Deleted in new
chr11	18933812	18935002	chr11:18933812-18935002	3	-	18933815	18934784	789624	1	1190,	0,
#Partially deleted in new
chr11	18934140	18939507	chr11:18934140-18939507	0	-	18934140	18934140	8553170	2	669,228,	0,5139,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	18934984	18939721	chr11:18934984-18939721	3	+	18934984	18934984	8553170	2	290,417,	0,4320,
#Deleted in new
chr11	18956054	18957015	chr11:18956054-18957015	7	-	18956054	18956054	16724991	1	961,	0,
#Deleted in new
chr11	18971745	18972703	chr11:18971745-18972703	7	-	18971745	18971745	16724991	1	958,	0,
#Deleted in new
chr11	19029696	19030438	chr11:19029696-19030438	7	-	19029696	19029696	16724991	1	742,	0,
#Partially deleted in new
chr11	19054454	19060681	chr11:19054454-19060681	3	-	19055409	19056402	789624	2	1973,63,	0,6164,
#Partially deleted in new
chr11	19117098	19149255	chr11:19117098-19149255	0	+	19117098	19117098	8553170	5	42,146,123,78,69,	0,25879,29082,30497,32088,
#Partially deleted in new
chr11	19117128	19176415	chr11:19117128-19176415	3	+	19117249	19175960	789624	17	148,146,123,78,145,65,163,126,134,101,125,63,94,84,158,98,594,	0,25849,29052,30467,32058,33598,35029,35430,38667,41811,46174,47172,47923,49173,53282,55594,58693,
#Partially deleted in new
chr11	19117144	19176415	chr11:19117144-19176415	1	+	19149202	19175960	789624	16	132,123,78,145,65,163,126,134,101,125,63,94,84,158,98,594,	0,29036,30451,32042,33582,35013,35414,38651,41795,46158,47156,47907,49157,53266,55578,58677,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr11	19117155	19176422	chr11:19117155-19176422	0	+	19117155	19117155	8553170	15	121,123,78,145,65,163,126,134,101,125,63,94,4267,98,601,	0,29025,30440,32031,33571,35002,35403,38640,41784,46147,47145,47896,49146,55567,58666,
#Deleted in new
chr11	19117183	19118817	chr11:19117183-19118817	0	+	19117183	19117183	8553170	3	93,248,92,	0,508,1542,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	19148613	19155931	chr11:19148613-19155931	0	+	19148613	19148613	8553170	6	207,145,65,163,126,136,	0,573,2113,3544,3945,7182,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	19148669	19152625	chr11:19148669-19152625	0	+	19148669	19148669	8553170	5	82,145,65,163,67,	0,517,2057,3488,3889,
#Deleted in new
chr11	19164281	19166716	chr11:19164281-19166716	0	+	19164281	19164281	8553170	2	864,415,	0,2020,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	19182036	19210571	chr11:19182036-19210571	3	-	19182669	19192448	0	7	710,94,133,169,140,89,122,	0,2915,4179,6099,10300,19917,28413,
#Partially deleted in new
chr11	19182163	19201976	chr11:19182163-19201976	1	-	19182632	19192448	8553170	5	583,94,169,140,23,	0,2788,5972,10173,19790,
#Partially deleted in new
chr11	19182167	19202030	chr11:19182167-19202030	1	-	19184977	19192448	8553170	4	579,94,140,77,	0,2784,10169,19786,
#Partially deleted in new
chr11	19182412	19202054	chr11:19182412-19202054	1	-	19182669	19192448	0	6	334,94,133,169,140,101,	0,2539,3803,5723,9924,19541,
#Partially deleted in new
chr11	19182412	19201981	chr11:19182412-19201981	1	-	19182669	19192448	8553170	7	334,94,133,169,140,169,28,	0,2539,3803,5723,9924,19066,19541,
#Partially deleted in new
chr11	19182414	19201989	chr11:19182414-19201989	1	-	19182632	19192448	8553170	5	332,94,133,140,36,	0,2537,3801,9922,19539,
#Partially deleted in new
chr11	19196774	19281426	chr11:19196774-19281426	3	+	19196774	19196774	8553170	4	145,147,47,177,	0,28059,55470,84475,
#Partially deleted in new
chr11	19224062	19241620	chr11:19224062-19241620	3	-	19224657	19240121	0	13	778,395,133,535,88,204,138,162,315,157,279,124,124,	0,1158,1669,5391,6178,6568,8171,10297,10681,13251,13791,16044,17434,
#Partially deleted in new
chr11	19224065	19241620	chr11:19224065-19241620	1	-	19224657	19240121	0	13	775,395,133,535,88,204,138,162,315,157,279,124,214,	0,1155,1666,5388,6175,6565,8168,10294,10678,13248,13788,16041,17341,
#Partially deleted in new
chr11	19224534	19240951	chr11:19224534-19240951	1	-	19224657	19240121	0	13	306,395,133,535,88,204,138,162,315,157,279,124,404,	0,686,1197,4919,5706,6096,7699,9825,10209,12779,13319,15572,16013,
#Deleted in new
chr11	19225519	19226078	chr11:19225519-19226078	0	-	19225519	19225519	8553170	2	96,347,	0,212,
#Partially deleted in new
chr11	19237346	19241598	chr11:19237346-19241598	0	-	19237346	19240121	789624	4	124,279,124,192,	0,507,2760,4060,
#Deleted in new
chr11	19274539	19275269	chr11:19274539-19275269	7	-	19274539	19274539	16724991	1	730,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	19299882	19308358	chr11:19299882-19308358	3	+	19299882	19299882	8553170	4	288,84,107,169,	0,1278,1494,8307,
#Partially deleted in new
chr11	19300001	19308358	chr11:19300001-19308358	0	+	19300001	19300001	8553170	3	169,84,169,	0,1159,8188,
#Partially deleted in new
chr11	19350723	20121598	chr11:19350723-20121598	3	+	19350952	20118258	0	38	304,118,53,73,259,161,1102,113,109,390,123,139,292,703,468,66,45,161,189,53,24,75,84,112,146,173,154,163,101,96,169,236,155,72,197,119,204,3466,	0,481760,492147,518201,529145,541710,582452,588937,595677,597967,633401,685235,693257,694244,698004,699112,700565,703356,705045,711583,717462,717600,726828,727269,729340,732283,740141,741482,742375,744948,746853,750213,752531,752929,754807,756940,763868,767409,
#Deleted in new
chr11	19380483	19385014	chr11:19380483-19385014	3	+	19380483	19380483	8553170	2	111,395,	0,4136,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	19401871	19401981	chr11:19401871-19401981	7	-	19401871	19401871	16724991	1	110,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	19502671	19507229	chr11:19502671-19507229	3	-	19502671	19502671	789624	3	1187,129,1991,	0,1613,2567,
#Deleted in new
chr11	19504890	19505900	chr11:19504890-19505900	0	-	19504890	19504890	8553170	3	203,157,209,	0,348,801,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	19510889	19519896	chr11:19510889-19519896	3	-	19510889	19510889	789624	3	835,199,147,	0,7507,8860,
#Deleted in new
chr11	19575309	19575372	chr11:19575309-19575372	3	+	19575309	19575309	5263520	1	63,	0,
#Deleted in new
chr11	19591155	19591291	chr11:19591155-19591291	3	-	19591155	19591155	8553170	1	136,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	19710933	19712619	chr11:19710933-19712619	3	-	19710933	19710933	8553170	1	1686,	0,
#Partially deleted in new
chr11	19713334	20121598	chr11:19713334-20121598	1	+	19713695	20118258	0	39	628,118,53,73,259,161,1102,113,109,390,123,139,292,703,468,66,45,161,189,53,24,75,84,112,146,9,173,154,163,101,96,169,236,155,72,197,119,204,3466,	0,119149,129536,155590,166534,179099,219841,226326,233066,235356,270790,322624,330646,331633,335393,336501,337954,340745,342434,348972,354851,354989,364217,364658,366729,369257,369672,377530,378871,379764,382337,384242,387602,389920,390318,392196,394329,401257,404798,
#Partially deleted in new
chr11	19713334	20121598	chr11:19713334-20121598	1	+	19713695	20118258	789624	40	628,118,53,73,259,69,161,1102,113,109,390,123,139,292,703,468,66,45,161,189,99,53,24,75,84,112,150,181,154,163,101,96,169,236,155,72,197,119,204,3466,	0,119149,129536,155590,166534,170959,179099,219841,226326,233066,235356,270790,322624,330646,331633,335393,336501,337954,340745,342434,343195,348972,354851,354989,364217,364658,366729,369664,377530,378871,379764,382337,384242,387602,389920,390318,392196,394329,401257,404798,
#Partially deleted in new
chr11	19713334	20121598	chr11:19713334-20121598	1	+	19713695	20118258	789624	38	628,118,53,73,259,161,1102,113,109,390,123,139,292,703,468,66,45,161,189,53,24,75,84,112,150,181,154,163,101,96,169,236,155,72,197,119,204,3466,	0,119149,129536,155590,166534,179099,219841,226326,233066,235356,270790,322624,330646,331633,335393,336501,337954,340745,342434,348972,354851,354989,364217,364658,366729,369664,377530,378871,379764,382337,384242,387602,389920,390318,392196,394329,401257,404798,
#Partially deleted in new
chr11	19713365	20121598	chr11:19713365-20121598	1	+	19713695	20118258	0	38	597,118,53,73,259,161,1102,113,109,390,123,139,292,703,468,66,45,161,189,53,24,75,84,112,146,173,154,163,101,96,169,236,155,72,197,119,204,3466,	0,119118,129505,155559,166503,179068,219810,226295,233035,235325,270759,322593,330615,331602,335362,336470,337923,340714,342403,348941,354820,354958,364186,364627,366698,369641,377499,378840,379733,382306,384211,387571,389889,390287,392165,394298,401226,404767,
#Partially deleted in new
chr11	19713596	20118574	chr11:19713596-20118574	1	+	19713695	20118258	0	41	366,118,53,73,259,69,161,1102,113,109,390,123,139,292,703,468,66,45,161,189,99,53,24,75,84,112,146,9,173,154,163,101,96,169,236,155,72,197,119,204,442,	0,118887,129274,155328,166272,170697,178837,219579,226064,232804,235094,270528,322362,330384,331371,335131,336239,337692,340483,342172,342933,348710,354589,354727,363955,364396,366467,368995,369410,377268,378609,379502,382075,383980,387340,389658,390056,391934,394067,400995,404536,
#Deleted in new
chr11	19760003	19760083	chr11:19760003-19760083	3	-	19760003	19760003	5263520	1	80,	0,
#Partially deleted in new
chr11	19777801	19880127	chr11:19777801-19880127	0	+	19777801	19777801	8553170	5	181,118,53,73,259,	0,54682,65069,91123,102067,
#Partially deleted in new
chr11	19813717	19832601	chr11:19813717-19832601	0	+	19813783	19832601	8553170	2	138,118,	0,18766,
#Partially deleted in new
chr11	19931764	19933719	chr11:19931764-19933719	0	+	19931764	19931764	8553170	2	26,544,	0,1411,
#Deleted in new
chr11	19978698	19981337	chr11:19978698-19981337	3	-	19978698	19978698	8553170	2	497,101,	0,2538,
#Partially deleted in new
chr11	20022555	20118603	chr11:20022555-20118603	1	+	20023106	20118258	0	28	240,43,139,292,703,468,45,161,189,53,24,75,84,112,146,173,154,163,101,96,169,236,155,72,197,119,204,471,	0,534,13403,21425,22412,26172,28733,31524,33213,39751,45630,45768,54996,55437,57508,60451,68309,69650,70543,73116,75021,78381,80699,81097,82975,85108,92036,95577,
#Partially deleted in new
chr11	20022837	20080184	chr11:20022837-20080184	0	+	20023106	20080184	789624	13	295,139,292,703,468,161,189,53,24,75,84,112,121,	0,13121,21143,22130,25890,31242,32931,39469,45348,45486,54714,55155,57226,
#Partially deleted in new
chr11	20022844	20044991	chr11:20022844-20044991	0	+	20023106	20044991	789624	5	58,43,139,292,24,	0,245,13114,21136,22123,
#Partially deleted in new
chr11	20027254	20044991	chr11:20027254-20044991	0	+	20027254	20027254	8553170	4	213,139,292,24,	0,8704,16726,17713,
#Partially deleted in new
chr11	20027553	20044995	chr11:20027553-20044995	0	+	20027553	20027553	8553170	4	148,139,292,28,	0,8405,16427,17414,
#Partially deleted in new
chr11	20043845	20049303	chr11:20043845-20049303	3	-	20043845	20043845	789624	2	452,330,	0,5128,
#Partially deleted in new
chr11	20104210	20118581	chr11:20104210-20118581	0	+	20104210	20104210	8553170	4	1517,119,204,449,	0,3453,10381,13922,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	20107244	20114680	chr11:20107244-20114680	0	+	20107244	20107244	8553170	2	538,89,	0,7347,
#Partially deleted in new
chr11	20114382	20118282	chr11:20114382-20118282	0	+	20114382	20114382	8553170	2	413,150,	0,3750,
#Deleted in new
chr11	20119683	20120632	chr11:20119683-20120632	3	-	20119683	20119683	8553170	2	601,59,	0,890,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	20131729	20135465	chr11:20131729-20135465	3	+	20131729	20131729	8553170	1	3736,	0,
#Deleted in new
chr11	20156154	20160613	chr11:20156154-20160613	3	-	20156213	20160324	789624	4	419,203,102,656,	0,882,3036,3803,
#Partially deleted in new
chr11	20363684	20367625	chr11:20363684-20367625	1	+	20364237	20367380	0	3	65,196,452,	0,552,3489,
#Partially deleted in new
chr11	20363722	20383334	chr11:20363722-20383334	1	+	20364237	20383205	0	6	27,196,108,138,62,355,	0,514,3451,12857,18455,19257,
#Partially deleted in new
chr11	20363724	20383368	chr11:20363724-20383368	1	+	20364237	20383205	0	6	74,196,108,138,62,389,	0,512,3449,12855,18453,19255,
#Partially deleted in new
chr11	20363742	20383782	chr11:20363742-20383782	1	+	20363811	20383205	0	6	170,196,108,138,62,803,	0,494,3431,12837,18435,19237,
#Partially deleted in new
chr11	20363796	20383783	chr11:20363796-20383783	3	+	20364237	20383205	0	5	636,108,138,62,804,	0,3377,12783,18381,19183,
#Partially deleted in new
chr11	20363853	20367513	chr11:20363853-20367513	1	+	20364237	20367380	0	3	59,196,340,	0,383,3320,
#Partially deleted in new
chr11	20364140	20367655	chr11:20364140-20367655	1	+	20364237	20367380	0	2	292,482,	0,3033,
#Partially deleted in new
chr11	20364179	20383616	chr11:20364179-20383616	1	+	20364237	20383205	789624	4	253,108,62,637,	0,2994,17998,18800,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	20376016	20383778	chr11:20376016-20383778	0	+	20376016	20376016	8553170	3	701,62,799,	0,6161,6963,
#Partially deleted in new
chr11	20387529	20509253	chr11:20387529-20509253	3	+	20387746	20508413	0	16	245,136,83,50,103,160,145,66,122,100,79,188,87,51,88,950,	0,489,2214,4681,5367,8273,10047,15389,20381,39236,64600,74450,76930,106389,106637,120774,
#Partially deleted in new
chr11	20387557	20509294	chr11:20387557-20509294	0	+	20387746	20392240	789624	15	217,83,50,103,160,145,66,122,100,79,188,87,51,88,991,	0,2186,4653,5339,8245,10019,15361,20353,39208,64572,74422,76902,106361,106609,120746,
#Partially deleted in new
chr11	20387639	20397662	chr11:20387639-20397662	0	+	20387746	20392240	789624	7	135,83,50,103,64,160,86,	0,2104,4571,5257,6151,8163,9937,
#Partially deleted in new
chr11	20387715	20508708	chr11:20387715-20508708	1	+	20387746	20508413	0	14	59,83,103,160,145,66,122,100,79,188,87,51,88,405,	0,2028,5181,8087,9861,15203,20195,39050,64414,74264,76744,106203,106451,120588,
#Partially deleted in new
chr11	20387746	20392251	chr11:20387746-20392251	0	+	20387746	20387911	789624	3	408,83,41,	0,1997,4464,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	20405445	20509282	chr11:20405445-20509282	0	+	20405445	20405445	8553170	8	2587,100,79,188,87,51,88,979,	0,21320,46684,56534,59014,88473,88721,102858,
#Partially deleted in new
chr11	20574185	20575042	chr11:20574185-20575042	7	+	20574185	20574185	16724991	2	68,472,	0,385,
#Partially deleted in new
chr11	20599399	20659285	chr11:20599399-20659285	3	+	20599672	20654868	789624	16	276,537,139,132,174,142,133,135,104,125,113,132,100,101,168,4573,	0,1729,4886,7607,8079,15279,18352,27308,28580,31291,36907,37772,39059,47434,52889,55313,
#Partially deleted in new
chr11	20599593	20654890	chr11:20599593-20654890	0	+	20599672	20607030	789624	15	82,537,132,174,142,133,135,104,125,113,132,100,101,168,178,	0,1535,7413,7885,15085,18158,27114,28386,31097,36713,37578,38865,47240,52695,55119,
#Partially deleted in new
chr11	20629183	20655064	chr11:20629183-20655064	0	+	20629183	20629183	8553170	8	30,125,113,132,100,101,168,352,	0,1507,7123,7988,9275,17650,23105,25529,
#Partially deleted in new
chr11	20669550	21575681	chr11:20669550-21575681	1	+	20669723	21575022	789624	19	228,129,151,97,73,83,135,103,74,100,129,126,123,96,141,194,177,225,710,	0,8381,114129,215893,248631,249701,257757,258826,268235,277785,290881,444038,559781,701302,864823,890638,901213,903634,905421,
#Partially deleted in new
chr11	20669570	21575681	chr11:20669570-21575681	1	+	20669723	21575022	789624	21	208,84,129,151,171,97,73,83,135,103,74,100,129,126,123,96,141,194,177,225,710,	0,4918,8361,114109,178012,215873,248611,249681,257737,258806,268215,277765,290861,444018,559761,701282,864803,890618,901193,903614,905401,
#Partially deleted in new
chr11	20669571	21575459	chr11:20669571-21575459	3	+	20669723	21575022	789624	20	207,129,151,171,97,73,83,135,103,74,100,129,126,123,96,141,194,177,225,488,	0,8360,114108,178011,215872,248610,249680,257736,258805,268214,277764,290860,444017,559760,701281,864802,890617,901192,903613,905400,
#Partially deleted in new
chr11	20669660	21575067	chr11:20669660-21575067	1	+	20669723	21575022	789624	19	118,129,151,171,97,73,83,135,103,74,100,129,126,123,96,194,177,225,96,	0,8271,114019,177922,215783,248521,249591,257647,258716,268125,277675,290771,443928,559671,701192,890528,901103,903524,905311,
#Deleted in new
chr11	20670424	20671297	chr11:20670424-20671297	3	-	20670424	20670424	8553170	2	232,164,	0,709,
#Partially deleted in new
chr11	20769224	20847646	chr11:20769224-20847646	0	+	20769224	20769224	8553170	3	367,151,64,	0,14455,78358,
#Partially deleted in new
chr11	20770828	20918246	chr11:20770828-20918246	0	+	20770828	20770828	8553170	5	72,151,171,97,65,	0,12851,76754,114615,147353,
#Partially deleted in new
chr11	20783668	20885537	chr11:20783668-20885537	0	+	20783668	20783668	8553170	2	162,94,	0,101775,
#Deleted in new
chr11	20927024	20928444	chr11:20927024-20928444	0	+	20927024	20927024	8553170	2	418,68,	0,1352,
#Partially deleted in new
chr11	20935695	21229388	chr11:20935695-21229388	0	+	20935695	20935695	8553170	6	77,74,100,129,126,57,	0,2090,11640,24736,177893,293636,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	21000880	21000997	chr11:21000880-21000997	7	-	21000880	21000880	16724991	1	117,	0,
#Deleted in new
chr11	21169747	21170137	chr11:21169747-21170137	7	+	21169747	21169747	16724991	1	390,	0,
#Partially deleted in new
chr11	21260060	21262570	chr11:21260060-21262570	3	-	21260060	21260060	8553170	2	690,33,	0,2477,
#Partially deleted in new
chr11	21283660	21575336	chr11:21283660-21575336	0	+	21283660	21283660	8553170	6	903,96,141,177,225,365,	0,87192,250713,287103,289524,291311,
#Partially deleted in new
chr11	21283736	21504199	chr11:21283736-21504199	0	+	21283736	21283736	8553170	3	827,96,114,	0,87116,220349,
#Deleted in new
chr11	21283778	21284955	chr11:21283778-21284955	7	+	21283778	21283778	16724991	1	1177,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	21383800	21383909	chr11:21383800-21383909	7	-	21383800	21383800	16724991	1	109,	0,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr11	21799933	22283344	chr11:21799933-22283344	0	+	21799933	21799933	8553170	24	55,143,71,113,162,47,78,76,114,69,285,135,106,61,152,75,223,170,98,131,206,179,106,3801,	0,53754,56407,183032,279607,403870,411303,418652,421163,426050,427368,450303,450807,451017,455437,457746,459585,462195,463012,470378,472850,474635,476160,479610,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	22113447	22117001	chr11:22113447-22117001	3	+	22113447	22113447	8553170	2	34,443,	0,3111,
#Partially deleted in new
chr11	22193175	22283357	chr11:22193175-22283357	3	+	22193492	22279765	789624	22	357,47,51,42,114,69,285,114,116,135,106,61,152,75,223,170,98,131,206,179,106,3814,	0,10628,18088,25070,27921,32808,34126,42987,46393,57061,57565,57775,62195,64504,66343,68953,69770,77136,79608,81393,82918,86368,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	22261208	22262256	chr11:22261208-22262256	3	-	22261208	22261208	8553170	2	428,88,	0,960,
#Partially deleted in new
chr11	22270396	22278034	chr11:22270396-22278034	0	+	22270396	22270396	8553170	5	46,206,179,106,249,	0,2387,4172,5697,7389,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	22283729	22338245	chr11:22283729-22338245	3	-	22283729	22283729	8553170	4	95,151,138,251,	0,21927,23507,54265,
#Partially deleted in new
chr11	22319819	22338224	chr11:22319819-22338224	1	-	22319819	22319819	8553170	2	341,230,	0,18175,
#Partially deleted in new
chr11	22338096	22379503	chr11:22338096-22379503	3	+	22338533	22377740	789624	12	523,253,119,115,88,87,143,150,133,111,128,2099,	0,3431,5150,21316,22800,24642,27450,31942,36658,37885,38448,39308,
#Partially deleted in new
chr11	22342976	22360965	chr11:22342976-22360965	0	+	22342976	22342976	8553170	3	389,115,69,	0,16436,17920,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	22359476	22366369	chr11:22359476-22366369	0	+	22359476	22359476	8553170	4	51,88,87,823,	0,1420,3262,6070,
#Deleted in new
chr11	22361212	22362294	chr11:22361212-22362294	3	-	22361212	22361212	8553170	2	93,79,	0,1003,
#Partially deleted in new
chr11	22445687	22492019	chr11:22445687-22492019	3	-	22445687	22445687	789624	4	80,99,137,105,	0,22159,34385,46227,
#Deleted in new
chr11	22445687	22447376	chr11:22445687-22447376	1	-	22445687	22445687	8553170	2	80,263,	0,1426,
#Partially deleted in new
chr11	22492111	22502846	chr11:22492111-22502846	3	+	22492111	22492111	8553170	2	93,188,	0,10547,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	22622889	22625841	chr11:22622889-22625841	3	-	22624685	22625810	0	1	2952,	0,
#Deleted in new
chr11	22625508	22626403	chr11:22625508-22626403	0	+	22625508	22625508	8553170	1	895,	0,
#Partially deleted in new
chr11	22625641	22749190	chr11:22625641-22749190	0	+	22674869	22749190	789624	6	172,165,122,142,64,71,	0,49208,60026,100650,112063,123478,
#Partially deleted in new
chr11	22666582	22702630	chr11:22666582-22702630	0	+	22666582	22666582	8553170	4	25,165,122,423,	0,8267,19085,35625,
#Partially deleted in new
chr11	22666614	22813055	chr11:22666614-22813055	3	+	22674869	22812016	789624	8	285,165,122,142,64,142,108,1258,	0,8235,19053,59677,71090,82505,89231,145183,
#Partially deleted in new
chr11	22667075	22726432	chr11:22667075-22726432	0	+	22674869	22726432	789624	4	119,165,122,141,	0,7774,18592,59216,
#Partially deleted in new
chr11	22668107	22812996	chr11:22668107-22812996	1	+	22674869	22812016	789624	8	228,165,122,142,64,142,108,1199,	0,6742,17560,58184,69597,81012,87738,143690,
#Partially deleted in new
chr11	22668107	22813001	chr11:22668107-22813001	0	+	22674869	22731347	789624	9	228,165,122,142,66,64,142,108,1204,	0,6742,17560,58184,63223,69597,81012,87738,143690,
#Partially deleted in new
chr11	22668107	22731347	chr11:22668107-22731347	1	+	22674869	22731347	789624	5	228,165,122,142,17,	0,6742,17560,58184,63223,
#Partially deleted in new
chr11	22672576	22737760	chr11:22672576-22737760	0	+	22674869	22737760	789624	5	94,165,122,142,56,	0,2273,13091,53715,65128,
#Partially deleted in new
chr11	22674772	22749261	chr11:22674772-22749261	0	+	22674869	22749261	789624	5	242,122,142,64,142,	0,10895,51519,62932,74347,
#Partially deleted in new
chr11	22755647	22755953	chr11:22755647-22755953	0	+	22755647	22755647	8553170	2	39,108,	0,198,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	22813798	22827877	chr11:22813798-22827877	0	-	22813798	22813798	8553170	4	268,145,114,54,	0,6393,13408,14025,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	22818928	22829865	chr11:22818928-22829865	3	-	22823118	22829748	789624	4	4205,114,51,171,	0,8278,8895,10766,
#Partially deleted in new
chr11	22822746	22829571	chr11:22822746-22829571	0	-	22822746	22822746	8553170	4	387,114,51,277,	0,4460,5077,6548,
#Partially deleted in new
chr11	22822866	22829373	chr11:22822866-22829373	0	-	22822866	22822866	789624	4	267,114,51,117,	0,4340,4957,6390,
#Partially deleted in new
chr11	22827244	22830299	chr11:22827244-22830299	0	-	22827244	22827244	8553170	3	76,51,136,	0,579,2919,
#Partially deleted in new
chr11	22846930	22860426	chr11:22846930-22860426	3	-	22847509	22860421	789624	4	591,105,45,50,	0,10991,12521,13446,
#Partially deleted in new
chr11	22847378	22858152	chr11:22847378-22858152	0	-	22847378	22847378	8553170	2	143,231,	0,10543,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	23164899	23166786	chr11:23164899-23166786	1	+	23164899	23164899	8553170	4	194,144,121,51,	0,290,1593,1836,
#Partially deleted in new
chr11	23370115	23377644	chr11:23370115-23377644	7	-	23370115	23370115	16724991	2	224,469,	0,7060,
#Deleted in new
chr11	23403804	23406103	chr11:23403804-23406103	7	+	23403804	23403804	16724991	1	2299,	0,
#Deleted in new
chr11	23419104	23419190	chr11:23419104-23419190	3	-	23419104	23419104	5263520	1	86,	0,
#Deleted in new
chr11	23431676	23431799	chr11:23431676-23431799	7	+	23431676	23431676	16724991	1	123,	0,
#Deleted in new
chr11	23478067	23480430	chr11:23478067-23480430	7	+	23478067	23478067	16724991	2	207,2059,	0,304,
#Deleted in new
chr11	23520321	23521202	chr11:23520321-23521202	7	+	23520321	23520321	16724991	1	881,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	23730587	23796970	chr11:23730587-23796970	3	+	23730587	23730587	8553170	4	299,59,62,263,	0,1012,64235,66120,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	23761329	23804598	chr11:23761329-23804598	3	-	23761329	23761329	8553170	3	301,85,120,	0,19458,43149,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	23849777	23849882	chr11:23849777-23849882	3	+	23849777	23849777	8553170	1	105,	0,
#Partially deleted in new
chr11	23886134	23893557	chr11:23886134-23893557	7	+	23886134	23886134	16724991	2	157,439,	0,6984,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	24235476	24262205	chr11:24235476-24262205	3	-	24235476	24235476	8553170	6	29,57,120,127,96,125,	0,13396,22715,23959,24441,26604,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	24455910	24456010	chr11:24455910-24456010	3	+	24455910	24455910	8553170	1	100,	0,
#Partially deleted in new
chr11	24496969	24893337	chr11:24496969-24893337	0	+	24496969	24496969	8553170	6	336,118,71,82,63,2419,	0,232199,235148,241251,266276,393949,
#Partially deleted in new
chr11	24497058	24786695	chr11:24497058-24786695	0	+	24497058	24497058	8553170	6	247,118,71,82,88,881,	0,232110,235059,241162,254396,288756,
#Partially deleted in new
chr11	24497138	24832049	chr11:24497138-24832049	0	+	24497138	24497138	8553170	6	167,118,71,82,63,146,	0,232030,234979,241082,266107,334765,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	24497177	25081104	chr11:24497177-25081104	3	+	24497243	25078658	789624	12	128,118,71,82,63,63,63,75,168,93,78,2551,	0,231991,234940,241043,266068,408813,417298,479413,485948,552860,580151,581376,
#Partially deleted in new
chr11	24497194	24983182	chr11:24497194-24983182	0	+	24497243	24983182	789624	7	111,118,71,82,63,75,57,	0,231974,234923,241026,266051,479396,485931,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	24497210	25082604	chr11:24497210-25082604	1	+	24738227	25078658	789624	12	95,114,71,82,63,63,63,75,168,93,78,4051,	0,231962,234907,241010,266035,408780,417265,479380,485915,552827,580118,581343,
#Deleted in new
chr11	24701274	24701575	chr11:24701274-24701575	7	+	24701274	24701274	16724991	1	301,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	24729139	25082631	chr11:24729139-25082631	1	+	24738227	25078658	789624	11	147,71,82,63,63,63,75,168,93,78,4078,	0,2978,9081,34106,176851,185336,247451,253986,320898,348189,349414,
#Deleted in new
chr11	24891764	24892521	chr11:24891764-24892521	0	+	24891764	24891764	8553170	2	164,293,	0,464,
#Partially deleted in new
chr11	25140532	25141023	chr11:25140532-25141023	7	-	25140532	25140532	16724991	1	491,	0,
#Deleted in new
chr11	25588474	25588795	chr11:25588474-25588795	7	-	25588474	25588474	16724991	1	321,	0,
#Deleted in new
chr11	25630719	25631041	chr11:25630719-25631041	7	+	25630719	25630719	16724991	1	322,	0,
#Partially deleted in new
chr11	25734769	25781666	chr11:25734769-25781666	0	+	25734769	25734769	8553170	5	100,85,98,142,38,	0,5706,42924,45711,46859,
#Partially deleted in new
chr11	25734769	25781758	chr11:25734769-25781758	3	+	25734769	25734769	8553170	5	100,98,98,142,130,	0,35701,42924,45711,46859,
#Partially deleted in new
chr11	25734808	25774423	chr11:25734808-25774423	1	+	25734808	25734808	8553170	5	61,85,77,98,254,	0,5667,32403,35662,39361,
#Partially deleted in new
chr11	25924187	25926808	chr11:25924187-25926808	3	+	25924187	25924187	8553170	2	145,203,	0,2418,
#Partially deleted in new
chr11	26045986	26047598	chr11:26045986-26047598	7	+	26045986	26045986	16724991	2	789,763,	0,849,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	26189122	26208347	chr11:26189122-26208347	3	+	26189122	26189122	8553170	2	208,302,	0,18923,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	26285710	26288007	chr11:26285710-26288007	3	-	26285710	26285710	789624	3	446,222,48,	0,1617,2249,
#Partially deleted in new
chr11	26309598	26660680	chr11:26309598-26660680	1	+	26441919	26660444	789624	27	121,195,72,119,159,101,45,132,107,56,122,135,97,61,83,141,165,37,112,58,98,134,153,148,81,106,419,	0,132319,134166,153431,198505,207228,216036,221606,224857,227807,232348,237817,243650,250120,288766,289259,289951,314863,324605,325414,329545,332297,333583,338110,346526,346777,350663,
#Partially deleted in new
chr11	26331423	26663288	chr11:26331423-26663288	3	+	26332275	26660444	789624	27	898,195,72,119,159,101,45,132,107,56,122,135,97,61,83,141,165,37,112,58,98,134,153,148,81,106,3027,	0,110494,112341,131606,176680,185403,194211,199781,203032,205982,210523,215992,221825,228295,266941,267434,268126,293038,302780,303589,307720,310472,311758,316285,324701,324952,328838,
#Partially deleted in new
chr11	26332120	26508780	chr11:26332120-26508780	1	+	26332275	26508292	789624	5	201,195,72,119,677,	0,109797,111644,130909,175983,
#Partially deleted in new
chr11	26427050	26427412	chr11:26427050-26427412	7	+	26427050	26427050	16724991	1	362,	0,
#Partially deleted in new
chr11	26473901	26660820	chr11:26473901-26660820	1	+	26508109	26660444	789624	24	227,159,101,45,132,107,56,122,135,97,61,83,141,165,37,112,58,98,134,153,148,81,106,559,	0,34202,42925,51733,57303,60554,63504,68045,73514,79347,85817,124463,124956,125648,150560,160302,161111,165242,167994,169280,173807,182223,182474,186360,
#Partially deleted in new
chr11	26541944	26563229	chr11:26541944-26563229	0	+	26541944	26541944	8553170	5	124,135,97,61,190,	0,5471,11304,17774,21095,
#Deleted in new
chr11	26559032	26567094	chr11:26559032-26567094	1	-	26561064	26567094	789624	3	2193,732,43,	0,6132,8019,
#Deleted in new
chr11	26559032	26567094	chr11:26559032-26567094	1	-	26561064	26567094	789624	4	2193,150,732,43,	0,4083,6132,8019,
#Partially deleted in new
chr11	26559032	26572121	chr11:26559032-26572121	3	-	26561064	26565858	789624	4	2193,150,732,81,	0,4083,6132,13008,
#Partially deleted in new
chr11	26560304	26572233	chr11:26560304-26572233	1	-	26561064	26567094	789624	5	921,150,732,88,193,	0,2811,4860,6747,11736,
#Partially deleted in new
chr11	26560761	26572142	chr11:26560761-26572142	1	-	26561064	26567094	789624	4	464,732,88,102,	0,4403,6290,11279,
#Partially deleted in new
chr11	26565171	26569673	chr11:26565171-26569673	0	-	26565171	26567094	8553170	3	725,88,200,	0,1880,4302,
#Partially deleted in new
chr11	26667018	26722024	chr11:26667018-26722024	3	-	26671101	26721714	789624	15	4233,128,104,167,87,68,113,89,130,141,155,68,52,66,649,	0,6383,11693,14036,16738,19458,25470,30145,31387,36512,36774,42293,44288,45622,54357,
#Partially deleted in new
chr11	26670812	26723427	chr11:26670812-26723427	0	-	26681135	26703908	789624	15	439,128,104,167,87,68,117,89,130,141,155,68,52,66,121,	0,2589,7899,10242,12944,15664,21672,26351,27593,32718,32980,38499,40494,41828,52494,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	26691657	26721999	chr11:26691657-26721999	1	-	26692450	26721714	789624	9	944,89,130,141,155,68,52,66,624,	0,5506,6748,11873,12135,17654,19649,20983,29718,
#Partially deleted in new
chr11	26697187	26723361	chr11:26697187-26723361	0	-	26697187	26703908	789624	9	65,130,141,155,68,52,66,82,55,	0,1218,6343,6605,12124,14119,15453,19085,26119,
#Partially deleted in new
chr11	26709059	26722032	chr11:26709059-26722032	0	-	26709059	26709059	8553170	4	320,52,66,657,	0,2247,3581,12316,
#Deleted in new
chr11	26994183	26996121	chr11:26994183-26996121	3	+	26994526	26995162	789624	1	1938,	0,
#Partially deleted in new
chr11	27040724	27127675	chr11:27040724-27127675	3	+	27055430	27127453	0	8	304,254,115,199,106,197,167,383,	0,14671,16476,52443,74727,78924,84929,86568,
#Partially deleted in new
chr11	27040832	27055636	chr11:27040832-27055636	0	+	27055430	27055636	789624	3	196,263,244,	0,383,14560,
#Partially deleted in new
chr11	27040870	27046286	chr11:27040870-27046286	0	+	27040870	27040870	8553170	3	149,263,45,	0,345,5371,
#Partially deleted in new
chr11	27040961	27127807	chr11:27040961-27127807	1	+	27055430	27127453	0	9	67,263,257,115,199,106,197,167,515,	0,254,14431,16239,52206,74490,78687,84692,86331,
#Partially deleted in new
chr11	27041312	27127809	chr11:27041312-27127809	1	+	27055430	27127453	0	8	166,257,115,199,106,197,167,517,	0,14080,15888,51855,74139,78336,84341,85980,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	27047185	27218735	chr11:27047185-27218735	0	-	27047185	27047185	789624	4	127,103,164,77,	0,103864,170131,171473,
#Partially deleted in new
chr11	27055216	27127671	chr11:27055216-27127671	1	+	27055430	27127453	0	7	433,115,199,106,197,167,379,	0,1984,37951,60235,64432,70437,72076,
#Partially deleted in new
chr11	27055385	27119781	chr11:27055385-27119781	0	+	27055385	27055385	8553170	4	264,115,106,133,	0,1815,60066,64263,
#Partially deleted in new
chr11	27055425	27057433	chr11:27055425-27057433	0	+	27055425	27055425	8553170	2	224,233,	0,1775,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	27062982	27220113	chr11:27062982-27220113	0	-	27062982	27062982	789624	5	78,171,103,164,67,	0,3509,88067,154334,157064,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	27063019	27220086	chr11:27063019-27220086	3	-	27063019	27063019	789624	5	41,171,103,164,400,	0,3472,88030,154297,156667,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	27217151	27220102	chr11:27217151-27220102	1	-	27217151	27217151	8553170	2	329,416,	0,2535,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	27330826	27350424	chr11:27330826-27350424	0	-	27330826	27330826	8553170	6	29,138,155,142,159,93,	0,7271,8054,9869,10565,19505,
#Partially deleted in new
chr11	27338513	27363868	chr11:27338513-27363868	3	-	27338820	27363194	789624	6	522,142,159,108,139,1033,	0,2182,2878,11818,18889,24322,
#Partially deleted in new
chr11	27348868	27363234	chr11:27348868-27363234	1	-	27350247	27363194	789624	3	1571,139,399,	0,8534,13967,
#Partially deleted in new
chr11	27365960	27472746	chr11:27365960-27472746	3	-	27367866	27472302	0	18	3183,84,116,126,72,72,66,72,69,72,72,69,72,216,72,72,72,629,	0,5654,6322,7590,8014,10338,11197,12736,14310,14679,14934,16227,18375,19292,25133,26486,46828,106157,
#Partially deleted in new
chr11	27365960	27472775	chr11:27365960-27472775	1	-	27367866	27472302	0	17	3183,84,116,126,72,72,66,72,69,72,72,69,72,216,72,72,658,	0,5654,6322,7590,8014,10338,11197,12736,14310,14679,14934,16227,18375,19292,25133,26486,106157,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	27372999	27374000	chr11:27372999-27374000	0	-	27372999	27372999	8553170	2	677,26,	0,975,
#Partially deleted in new
chr11	27377157	27379183	chr11:27377157-27379183	0	-	27377157	27377157	8553170	2	66,487,	0,1539,
#Deleted in new
chr11	27384267	27385532	chr11:27384267-27385532	0	-	27384267	27384267	8553170	2	140,280,	0,985,
#Partially deleted in new
chr11	27385245	27472314	chr11:27385245-27472314	1	-	27385248	27472302	789624	3	223,72,197,	0,27543,86872,
#Partially deleted in new
chr11	27471728	27476221	chr11:27471728-27476221	3	+	27471728	27471728	789624	5	104,180,484,129,453,	0,1049,1439,2689,4040,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	27471797	27482433	chr11:27471797-27482433	0	+	27471797	27471797	789624	4	35,180,29,226,	0,980,1370,10410,
#Deleted in new
chr11	27483849	27484128	chr11:27483849-27484128	7	+	27483849	27483849	16724991	1	279,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	27494575	27506773	chr11:27494575-27506773	3	-	27498648	27506752	0	5	4229,210,72,119,58,	0,4783,6919,7226,12140,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	27494897	27506769	chr11:27494897-27506769	1	-	27498648	27506752	789624	4	3907,210,119,54,	0,4461,6904,11818,
#Partially deleted in new
chr11	27506837	27675978	chr11:27506837-27675978	0	+	27506837	27506837	8553170	6	61,69,161,222,58,402,	0,77431,133007,151403,152333,168739,
#Deleted in new
chr11	27514969	27515047	chr11:27514969-27515047	3	-	27514969	27514969	5263520	1	78,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	27521604	27521726	chr11:27521604-27521726	7	-	27521604	27521604	16724991	1	122,	0,
#Deleted in new
chr11	27581679	27582055	chr11:27581679-27582055	7	+	27581679	27581679	16724991	1	376,	0,
#Partially deleted in new
chr11	27639888	27659649	chr11:27639888-27659649	0	+	27639888	27639888	8553170	2	117,479,	0,19282,
#Partially deleted in new
chr11	27654892	27722058	chr11:27654892-27722058	3	-	27657820	27721414	0	2	3693,647,	0,66519,
#Partially deleted in new
chr11	27654892	27700488	chr11:27654892-27700488	1	-	27657820	27658564	0	2	3693,325,	0,45271,
#Partially deleted in new
chr11	27654892	27720723	chr11:27654892-27720723	1	-	27657820	27658564	0	2	3693,295,	0,65536,
#Partially deleted in new
chr11	27654892	27701633	chr11:27654892-27701633	1	-	27657820	27658564	0	2	3693,337,	0,46404,
#Partially deleted in new
chr11	27654892	27720723	chr11:27654892-27720723	1	-	27657820	27658564	0	2	3693,378,	0,65453,
#Partially deleted in new
chr11	27654892	27701053	chr11:27654892-27701053	1	-	27657820	27658564	0	2	3693,83,	0,46078,
#Partially deleted in new
chr11	27654892	27699667	chr11:27654892-27699667	1	-	27657820	27699405	0	2	3693,286,	0,44489,
#Partially deleted in new
chr11	27654892	27700488	chr11:27654892-27700488	1	-	27657820	27658564	0	3	3693,107,325,	0,3927,45271,
#Partially deleted in new
chr11	27654892	27701053	chr11:27654892-27701053	1	-	27657820	27658564	0	4	3693,117,283,83,	0,5263,19167,46078,
#Partially deleted in new
chr11	27654892	27701053	chr11:27654892-27701053	1	-	27657820	27674284	0	3	3693,283,83,	0,19167,46078,
#Deleted in new
chr11	27654892	27659658	chr11:27654892-27659658	1	-	27657820	27658564	0	2	3693,839,	0,3927,
#Deleted in new
chr11	27654892	27659658	chr11:27654892-27659658	1	-	27657820	27658564	0	1	4766,	0,
#Partially deleted in new
chr11	27654892	27720779	chr11:27654892-27720779	1	-	27657820	27658564	0	2	3693,136,	0,65751,
#Partially deleted in new
chr11	27654892	27701053	chr11:27654892-27701053	0	-	27660263	27674284	789624	4	3693,117,283,83,	0,5263,19167,46078,
#Partially deleted in new
chr11	27654892	27700900	chr11:27654892-27700900	1	-	27657820	27658564	0	2	3693,225,	0,45783,
#Partially deleted in new
chr11	27654892	27719747	chr11:27654892-27719747	1	-	27657820	27658564	0	2	3693,237,	0,64618,
#Partially deleted in new
chr11	27654892	27699667	chr11:27654892-27699667	1	-	27657820	27658564	0	2	3693,185,	0,44590,
#Partially deleted in new
chr11	27654892	27700488	chr11:27654892-27700488	1	-	27657820	27658564	0	2	3693,307,	0,45289,
#Partially deleted in new
chr11	27654892	27701633	chr11:27654892-27701633	0	-	27654892	27654892	8553170	2	3693,337,	0,46404,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	27665259	27677807	chr11:27665259-27677807	0	+	27665259	27665259	8553170	2	133,826,	0,11722,
#Partially deleted in new
chr11	27696311	27877648	chr11:27696311-27877648	3	-	27696311	27696311	8553170	2	211,147,	0,181190,
#Partially deleted in new
chr11	27806442	27806996	chr11:27806442-27806996	7	+	27806442	27806442	16724991	1	554,	0,
#Deleted in new
chr11	27888837	27891033	chr11:27888837-27891033	7	-	27888837	27888837	16724991	1	2196,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	27978668	28019575	chr11:27978668-28019575	3	-	27978668	27978668	8553170	4	447,180,75,104,	0,3509,23757,40803,
#Partially deleted in new
chr11	28020619	28108308	chr11:28020619-28108308	3	-	28021199	28097947	0	17	663,110,108,448,236,122,165,163,113,75,177,198,111,105,158,371,245,	0,3121,14767,15597,38306,41775,48639,56387,62236,62549,64012,67904,69997,70789,74023,77003,87444,
#Deleted in new
chr11	28056814	28056910	chr11:28056814-28056910	3	+	28056814	28056814	5263520	1	96,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	28076481	28097887	chr11:28076481-28097887	0	-	28076481	28076481	8553170	10	451,163,113,75,177,198,111,105,158,265,	0,525,6374,6687,8150,12042,14135,14927,18161,21141,
#Partially deleted in new
chr11	28084273	28088580	chr11:28084273-28088580	0	-	28084273	28084273	8553170	2	535,57,	0,4250,
#Partially deleted in new
chr11	28097331	28108145	chr11:28097331-28108145	0	-	28097331	28097331	8553170	2	662,82,	0,10732,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	28108247	28333507	chr11:28108247-28333507	1	+	28113334	28330501	789624	7	205,236,287,137,192,135,3112,	0,1918,5070,102814,181958,188549,222148,
#Partially deleted in new
chr11	28108319	28125587	chr11:28108319-28125587	1	+	28113334	28123873	789624	5	133,236,287,61,78,	0,1846,4998,15542,17190,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	28108329	28332422	chr11:28108329-28332422	0	+	28113334	28211177	789624	9	123,236,287,109,137,192,179,365,240,	0,1836,4988,89111,102732,181876,188423,222066,223853,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	28108353	28333507	chr11:28108353-28333507	1	+	28113334	28330841	789624	7	99,236,287,137,192,179,3112,	0,1812,4964,102708,181852,188399,222042,
#Partially deleted in new
chr11	28110165	28527041	chr11:28110165-28527041	0	+	28113334	28290208	789624	8	236,287,192,69,100,66,43,426,	0,3152,180040,241924,251771,314133,416312,416450,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	28110311	28333507	chr11:28110311-28333507	3	+	28113334	28328138	789624	7	90,287,137,192,179,71,3112,	0,3006,100750,179894,186441,217783,220084,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	28110311	28399086	chr11:28110311-28399086	0	+	28113334	28352136	789624	8	90,287,137,192,179,69,100,299,	0,3006,100750,179894,186441,241778,251625,288476,
#Partially deleted in new
chr11	28110314	28125866	chr11:28110314-28125866	0	+	28113334	28122171	789624	5	87,287,39,61,357,	0,3003,11827,13547,15195,
#Partially deleted in new
chr11	28110314	28164136	chr11:28110314-28164136	1	+	28113334	28163508	789624	3	87,287,808,	0,3003,53014,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	28110314	28145747	chr11:28110314-28145747	1	+	28113334	28134599	789624	4	87,287,100,244,	0,3003,24231,35189,
#Deleted in new
chr11	28144906	28145204	chr11:28144906-28145204	7	-	28144906	28144906	16724991	1	298,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	28261193	28261519	chr11:28261193-28261519	3	-	28261193	28261193	8553170	1	326,	0,
#Deleted in new
chr11	28287234	28287625	chr11:28287234-28287625	7	-	28287234	28287234	16724991	1	391,	0,
#Partially deleted in new
chr11	28327580	28330629	chr11:28327580-28330629	0	+	28327580	28327580	8553170	2	585,234,	0,2815,
#Deleted in new
chr11	28477480	28477548	chr11:28477480-28477548	3	-	28477480	28477480	5263520	1	68,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	28516831	28519341	chr11:28516831-28519341	3	+	28516831	28516831	8553170	2	484,263,	0,2247,
#Partially deleted in new
chr11	28679182	28683469	chr11:28679182-28683469	3	+	28679182	28679182	8553170	3	121,97,302,	0,367,3985,
#Partially deleted in new
chr11	28702614	29044871	chr11:28702614-29044871	3	+	28702614	28702614	8553170	4	220,84,75,427,	0,39210,335127,341830,
#Deleted in new
chr11	28986634	28987498	chr11:28986634-28987498	7	+	28986634	28986634	16724991	1	864,	0,
#Deleted in new
chr11	29275654	29276565	chr11:29275654-29276565	7	+	29275654	29275654	16724991	1	911,	0,
#Partially deleted in new
chr11	29335877	29594295	chr11:29335877-29594295	3	-	29335877	29335877	8553170	4	205,90,83,70,	0,59485,195410,258348,
#Partially deleted in new
chr11	29335897	29350349	chr11:29335897-29350349	0	-	29335897	29335897	8553170	2	185,120,	0,14332,
#Partially deleted in new
chr11	29391524	29393844	chr11:29391524-29393844	7	+	29391524	29391524	16724991	3	1027,300,346,	0,1428,1974,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	29519075	29552639	chr11:29519075-29552639	3	+	29519075	29519075	8553170	2	283,280,	0,33284,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	29594917	29630664	chr11:29594917-29630664	0	+	29594917	29594917	789624	3	49,46,301,	0,1888,35446,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	29618801	29630664	chr11:29618801-29630664	3	+	29618801	29618801	789624	3	58,442,301,	0,3833,11562,
#Deleted in new
chr11	29668885	29669628	chr11:29668885-29669628	7	-	29668885	29668885	16724991	1	743,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	29713908	29881714	chr11:29713908-29881714	3	+	29713908	29713908	8553170	3	232,111,233,	0,90582,167573,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	29721398	29721684	chr11:29721398-29721684	3	-	29721398	29721398	8553170	1	286,	0,
#Partially deleted in new
chr11	29725763	29726565	chr11:29725763-29726565	7	+	29725763	29725763	16724991	1	802,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	29980112	29982392	chr11:29980112-29982392	3	-	29980112	29980112	789624	1	2280,	0,
#Deleted in new
chr11	30009740	30017023	chr11:30009740-30017023	3	-	30010716	30012678	789624	2	3720,452,	0,6831,
#Deleted in new
chr11	30012938	30016359	chr11:30012938-30016359	0	-	30012938	30012938	8553170	2	522,23,	0,3398,
#Deleted in new
chr11	30167162	30167306	chr11:30167162-30167306	7	+	30167162	30167162	16724991	1	144,	0,
#Partially deleted in new
chr11	30231015	30235039	chr11:30231015-30235039	1	+	30231902	30233800	0	3	63,165,1470,	0,881,2554,
#Partially deleted in new
chr11	30231015	30235261	chr11:30231015-30235261	3	+	30231902	30233800	0	3	33,165,1692,	0,881,2554,
#Partially deleted in new
chr11	30231872	30234748	chr11:30231872-30234748	1	+	30231902	30233800	0	2	189,1179,	0,1697,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	30323050	30338227	chr11:30323050-30338227	3	+	30330948	30336795	789624	4	152,489,128,1661,	0,7835,9815,13516,
#Partially deleted in new
chr11	30323132	30331402	chr11:30323132-30331402	0	+	30323132	30323132	8553170	2	70,517,	0,7753,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	30328035	30332943	chr11:30328035-30332943	0	+	30330948	30332943	789624	2	3339,78,	0,4830,
#Deleted in new
chr11	30331643	30332941	chr11:30331643-30332941	0	+	30331643	30331643	8553170	2	157,76,	0,1222,
#Deleted in new
chr11	30368147	30368646	chr11:30368147-30368646	7	+	30368147	30368147	16724991	1	499,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	30384492	30586281	chr11:30384492-30586281	1	-	30388888	30580373	789624	7	4464,114,116,226,182,249,240,	0,29735,33025,110803,151501,195753,201549,
#Partially deleted in new
chr11	30410070	30580496	chr11:30410070-30580496	3	-	30411467	30580373	789624	6	1516,114,116,226,182,251,	0,4157,7447,85225,125923,170175,
#Partially deleted in new
chr11	30410869	30468995	chr11:30410869-30468995	0	-	30410869	30410869	8553170	4	717,114,116,52,	0,3358,6648,58074,
#Partially deleted in new
chr11	30411121	30441403	chr11:30411121-30441403	0	-	30411121	30411121	8553170	4	465,114,116,140,	0,3106,6396,30142,
#Partially deleted in new
chr11	30411180	30584203	chr11:30411180-30584203	0	-	30504789	30580373	789624	8	406,114,116,226,98,182,249,78,	0,3047,6337,84115,93555,124813,169065,172945,
#Partially deleted in new
chr11	30425551	30429268	chr11:30425551-30429268	3	+	30425551	30425551	8553170	2	65,300,	0,3417,
#Partially deleted in new
chr11	30451653	30536084	chr11:30451653-30536084	0	-	30451653	30451653	8553170	3	430,226,91,	0,43642,84340,
#Partially deleted in new
chr11	30495136	30536065	chr11:30495136-30536065	0	-	30495136	30495136	8553170	2	385,72,	0,40857,
#Partially deleted in new
chr11	30536058	30586872	chr11:30536058-30586872	0	-	30536058	30580373	789624	3	117,249,131,	0,44187,50683,
#Deleted in new
chr11	30584162	30584960	chr11:30584162-30584960	1	+	30584162	30584162	8553170	2	71,368,	0,430,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr11	30830368	30925408	chr11:30830368-30925408	0	-	30878583	30925408	789624	21	238,82,142,108,119,168,151,180,137,102,153,193,204,186,171,94,201,159,160,136,100,	0,919,26852,27538,28571,48175,50789,62449,63879,69172,69977,73122,74592,76171,78577,80958,85142,86501,90407,92134,94940,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	30863602	30906705	chr11:30863602-30906705	0	-	30883440	30906705	789624	11	1730,168,151,1476,180,137,102,153,202,204,166,	0,14941,17555,18440,29215,30645,35938,36743,39879,41358,42937,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr11	30863603	30992686	chr11:30863603-30992686	1	-	30878583	30952480	789624	20	1729,168,151,180,137,102,153,193,204,186,171,94,201,159,160,136,100,182,124,228,	0,14940,17554,29214,30644,35937,36742,39887,41357,42936,45342,47723,51907,53266,57172,58899,61705,68167,88841,128855,
#Partially deleted in new
chr11	30864941	30992684	chr11:30864941-30992684	0	-	30864941	30864941	8553170	19	391,168,151,180,137,102,153,1674,186,171,94,201,159,160,136,100,182,124,226,	0,13602,16216,27876,29306,34599,35404,38549,41598,44004,46385,50569,51928,55834,57561,60367,66829,87503,127517,
#Partially deleted in new
chr11	30878583	31328280	chr11:30878583-31328280	1	-	30878583	31328280	789624	36	128,151,180,137,102,153,193,204,186,171,94,201,159,160,136,100,182,124,158,135,61,119,135,106,126,164,102,171,93,167,94,206,163,157,270,164,	0,2574,14234,15664,20957,21762,24907,26377,27956,30362,32743,36927,38286,42192,43919,46725,53187,73861,185885,186435,199281,212809,215466,223593,225060,228213,231676,248885,259108,362866,386923,412063,427031,427648,429055,449533,
#Partially deleted in new
chr11	30906314	30909104	chr11:30906314-30909104	0	-	30906314	30906314	8553170	2	411,159,	0,2631,
#Partially deleted in new
chr11	30931770	31127665	chr11:30931770-31127665	0	-	30931770	30931770	8553170	12	182,93,158,135,61,119,135,106,122,164,102,197,	0,11811,132698,133248,146094,159622,162279,170406,171877,175026,178489,195698,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr11	30943201	31369810	chr11:30943201-31369810	0	-	31265541	31328280	789624	22	1139,124,158,135,61,119,135,106,126,164,102,171,93,94,167,94,163,157,270,170,118,114,	0,9243,121267,121817,134663,148191,150848,158975,160442,163595,167058,184267,194490,271968,298248,322305,362413,363030,364437,384915,392245,426495,
#Partially deleted in new
chr11	31106893	31241758	chr11:31106893-31241758	0	-	31106893	31106893	8553170	6	67,102,171,93,167,26,	0,3366,20575,30798,134556,134839,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	31155902	31241616	chr11:31155902-31241616	0	-	31155902	31155902	8553170	2	161,167,	0,85547,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	31262623	31369774	chr11:31262623-31369774	3	-	31263062	31328280	789624	9	450,94,206,163,157,270,170,118,78,	0,2883,28023,42991,43608,45015,65493,72823,107073,
#Deleted in new
chr11	31280671	31280987	chr11:31280671-31280987	7	-	31280671	31280671	16724991	1	316,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	31369839	31431849	chr11:31369839-31431849	3	+	31370748	31430401	789624	5	73,144,139,69,1579,	0,876,44971,56447,60431,
#Partially deleted in new
chr11	31369839	31385100	chr11:31369839-31385100	0	+	31369839	31369839	8553170	3	73,144,507,	0,876,14754,
#Partially deleted in new
chr11	31369839	31417338	chr11:31369839-31417338	0	+	31369839	31369839	8553170	3	73,144,2528,	0,876,44971,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	31369841	31408175	chr11:31369841-31408175	0	+	31369841	31369841	8553170	4	71,144,88,66,	0,874,37614,38268,
#Partially deleted in new
chr11	31369847	31414906	chr11:31369847-31414906	0	+	31370748	31396306	789624	4	65,144,112,96,	0,868,26435,44963,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	31369856	31427978	chr11:31369856-31427978	0	+	31370748	31421979	789624	5	56,144,139,161,1692,	0,859,44954,52115,56430,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	31369863	31408319	chr11:31369863-31408319	0	+	31370751	31374126	789624	5	49,144,103,88,210,	0,852,4239,37592,38246,
#Partially deleted in new
chr11	31370806	31426385	chr11:31370806-31426385	0	+	31370806	31408184	789624	4	53,221,139,99,	0,37303,44004,55480,
#Partially deleted in new
chr11	31417011	31430403	chr11:31417011-31430403	0	+	31417011	31417011	8553170	3	231,69,133,	0,9275,13259,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	31422064	31429866	chr11:31422064-31429866	0	+	31422064	31422064	8553170	3	68,194,384,	0,4222,7418,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	31426286	31430703	chr11:31426286-31430703	0	+	31426286	31429502	789624	3	69,124,433,	0,3196,3984,
#Partially deleted in new
chr11	31432400	31509574	chr11:31432400-31509574	1	-	31432499	31463276	789624	4	168,111,134,56,	0,1059,30771,77118,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	31432400	31456338	chr11:31432400-31456338	0	-	31437142	31456338	789624	4	168,111,79,79,	0,1059,4675,23859,
#Partially deleted in new
chr11	31432400	31509574	chr11:31432400-31509574	1	-	31432499	31463276	789624	6	168,111,127,89,134,56,	0,1059,23859,28225,30771,77118,
#Partially deleted in new
chr11	31432400	31509592	chr11:31432400-31509592	1	-	31432499	31433564	789624	4	168,111,259,74,	0,1059,45100,77118,
#Partially deleted in new
chr11	31432401	31509622	chr11:31432401-31509622	3	-	31432499	31463276	789624	7	167,111,127,89,134,63,104,	0,1058,23858,28224,30770,41322,77117,
#Deleted in new
chr11	31432401	31433755	chr11:31432401-31433755	0	-	31432401	31432401	8553170	2	167,296,	0,1058,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	31432430	31509594	chr11:31432430-31509594	0	-	31449037	31463276	8553170	9	138,111,1109,127,89,134,58,63,76,	0,1029,15552,23829,28195,30741,37309,41293,77088,
#Partially deleted in new
chr11	31432492	31509645	chr11:31432492-31509645	1	-	31432499	31433564	789624	3	76,111,127,	0,967,77026,
#Partially deleted in new
chr11	31449029	31509592	chr11:31449029-31509592	0	-	31449029	31449029	8553170	5	62,127,89,134,74,	0,7230,11596,14142,60489,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	31452197	31509563	chr11:31452197-31509563	0	-	31452197	31452197	8553170	3	895,127,45,	0,4062,57321,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	31452544	31509605	chr11:31452544-31509605	0	-	31452544	31452544	8553170	5	548,127,89,134,87,	0,3715,8081,10627,56974,
#Partially deleted in new
chr11	31456259	31509603	chr11:31456259-31509603	0	-	31456259	31463276	789624	5	127,89,134,40,85,	0,4366,6912,13498,53259,
#Partially deleted in new
chr11	31456292	31509632	chr11:31456292-31509632	0	-	31456292	31463276	789624	6	94,89,134,58,63,114,	0,4333,6879,13447,17431,53226,
#Partially deleted in new
chr11	31456312	31509578	chr11:31456312-31509578	0	-	31456312	31456312	8553170	5	74,134,40,63,126,	0,6859,13445,17411,53140,
#Partially deleted in new
chr11	31477114	31509608	chr11:31477114-31509608	0	-	31477114	31477114	8553170	2	645,90,	0,32404,
#Partially deleted in new
chr11	31488196	31509595	chr11:31488196-31509595	0	-	31488196	31488196	8553170	2	45,77,	0,21322,
#Partially deleted in new
chr11	31509699	31790328	chr11:31509699-31790328	3	+	31509784	31783524	789624	10	308,36,122,132,140,85,189,109,107,6936,	0,10356,29962,85070,94068,117410,122517,138041,140415,273693,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	31509754	31707405	chr11:31509754-31707405	1	+	31509784	31707013	789624	10	253,36,122,132,140,85,189,109,107,410,	0,10301,29907,85015,94013,117355,122462,137986,140360,197241,
#Partially deleted in new
chr11	31509758	31783781	chr11:31509758-31783781	1	+	31509784	31783538	789624	11	249,36,122,132,143,85,189,109,107,139,389,	0,10297,29903,85011,94006,117351,122458,137982,140356,253652,273634,
#Partially deleted in new
chr11	31509761	31784130	chr11:31509761-31784130	1	+	31509784	31783524	789624	10	246,36,122,132,143,85,189,109,107,738,	0,10294,29900,85008,94003,117348,122455,137979,140353,273631,
#Partially deleted in new
chr11	31509761	31719957	chr11:31509761-31719957	1	+	31509784	31719517	789624	10	246,36,122,132,140,85,189,109,107,485,	0,10294,29900,85008,94006,117348,122455,137979,140353,209711,
#Partially deleted in new
chr11	31509766	31664448	chr11:31509766-31664448	1	+	31509784	31662657	789624	10	241,36,122,132,140,85,189,109,107,1923,	0,10289,29895,85003,94001,117343,122450,137974,140348,152759,
#Deleted in new
chr11	31509766	31512584	chr11:31509766-31512584	1	+	31509784	31510452	789624	2	241,2215,	0,603,
#Partially deleted in new
chr11	31509766	31654855	chr11:31509766-31654855	1	+	31509784	31650257	789624	9	241,36,122,132,140,85,189,109,4741,	0,10289,29895,85003,94001,117343,122450,137974,140348,
#Partially deleted in new
chr11	31509766	31663162	chr11:31509766-31663162	1	+	31509784	31662657	789624	10	241,36,122,132,143,85,189,109,107,637,	0,10289,29895,85003,93998,117343,122450,137974,140348,152759,
#Partially deleted in new
chr11	31509769	31784573	chr11:31509769-31784573	0	+	31509784	31541445	789624	11	238,36,122,46,132,140,85,189,109,107,1181,	0,10286,29892,31661,85000,93998,117340,122447,137971,140345,273623,
#Partially deleted in new
chr11	31509769	31719703	chr11:31509769-31719703	1	+	31509784	31719517	789624	10	238,36,122,132,143,85,189,109,107,231,	0,10286,29892,85000,93995,117340,122447,137971,140345,209703,
#Partially deleted in new
chr11	31509770	31650221	chr11:31509770-31650221	0	+	31509784	31603808	789624	9	237,36,122,136,140,85,189,109,107,	0,10285,29891,84999,93997,117339,122446,137970,140344,
#Partially deleted in new
chr11	31509771	31784159	chr11:31509771-31784159	1	+	31509784	31783538	789624	11	236,36,122,132,140,85,189,109,107,139,767,	0,10284,29890,84998,93996,117338,122445,137969,140343,253639,273621,
#Partially deleted in new
chr11	31509772	31784362	chr11:31509772-31784362	0	+	31509784	31628298	789624	11	235,36,122,132,140,85,181,189,109,107,970,	0,10283,29889,84997,93995,117337,118466,122444,137968,140342,273620,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	31509777	31783775	chr11:31509777-31783775	1	+	31509784	31783429	789624	12	230,36,122,132,140,85,189,109,107,289,139,383,	0,10278,29884,84992,93990,117332,122439,137963,140337,172009,253633,273615,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	31509777	31715092	chr11:31509777-31715092	1	+	31509784	31714840	789624	10	230,36,122,132,140,85,189,109,107,462,	0,10278,29884,84992,93990,117332,122439,137963,140337,204853,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	31509778	31600553	chr11:31509778-31600553	0	+	31509778	31509778	8553170	5	229,36,122,132,1644,	0,10277,29883,84991,89131,
#Partially deleted in new
chr11	31509851	31783775	chr11:31509851-31783775	0	+	31509851	31783524	789624	9	156,36,122,143,85,189,109,107,383,	0,10204,29810,93913,117258,122365,137889,140263,273541,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	31509886	31634301	chr11:31509886-31634301	0	+	31509886	31509886	8553170	7	121,36,122,132,140,85,2085,	0,10169,29775,84883,93881,117223,122330,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	31509901	31714896	chr11:31509901-31714896	0	+	31509901	31594863	789624	11	106,36,122,38,132,140,85,189,109,107,266,	0,10154,29760,63685,84868,93866,117208,122315,137839,140213,204729,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	31603880	31719712	chr11:31603880-31719712	0	+	31603880	31719509	789624	7	27,85,189,109,107,149,240,	0,23229,28336,43860,46234,110750,115592,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	31618123	31767922	chr11:31618123-31767922	3	-	31618123	31618123	8553170	10	2831,42,133,95,106,98,91,109,152,288,	0,10941,12892,13231,14142,17419,27542,109663,149107,149511,
#Partially deleted in new
chr11	31637327	31767953	chr11:31637327-31767953	1	-	31637327	31637327	8553170	4	15,91,152,319,	0,8338,129903,130307,
#Partially deleted in new
chr11	31645905	31783723	chr11:31645905-31783723	0	+	31645905	31645905	8553170	2	4316,331,	0,137487,
#Partially deleted in new
chr11	31647844	31784054	chr11:31647844-31784054	0	+	31647844	31780741	789624	4	5,107,83,662,	0,2270,132834,135548,
#Partially deleted in new
chr11	31650180	31783759	chr11:31650180-31783759	0	+	31650180	31783524	789624	3	41,42,367,	0,37480,133212,
#Partially deleted in new
chr11	31689181	31767825	chr11:31689181-31767825	0	-	31689181	31689181	8553170	3	255,152,191,	0,78049,78453,
#Partially deleted in new
chr11	31761911	31783632	chr11:31761911-31783632	0	+	31761911	31761911	8553170	3	197,139,240,	0,1499,21481,
#Partially deleted in new
chr11	31761920	31783976	chr11:31761920-31783976	0	+	31761920	31761920	8553170	2	188,584,	0,21472,
#Partially deleted in new
chr11	31779712	31783757	chr11:31779712-31783757	0	+	31779712	31779712	8553170	2	233,365,	0,3680,
#Deleted in new
chr11	31784778	31811134	chr11:31784778-31811134	1	-	31789933	31806411	0	13	5241,151,116,151,83,159,166,216,42,131,61,77,307,	0,5931,8659,8873,9253,9851,15912,16782,17092,17925,21623,22070,26049,
#Deleted in new
chr11	31784781	31811310	chr11:31784781-31811310	1	-	31789933	31806411	0	14	5238,151,116,151,83,159,166,216,42,131,61,77,188,196,	0,5928,8656,8870,9250,9848,15909,16779,17089,17922,21620,22067,26046,26333,
#Deleted in new
chr11	31784791	31811331	chr11:31784791-31811331	1	-	31789933	31806411	0	14	5228,151,116,151,83,159,166,216,42,131,61,77,188,119,	0,5918,8646,8860,9240,9838,15899,16769,17079,17912,21610,22057,26036,26421,
#Deleted in new
chr11	31784791	31811677	chr11:31784791-31811677	1	-	31789933	31806411	0	13	5228,151,116,151,83,159,166,216,131,61,77,188,563,	0,5918,8646,8860,9240,9838,15899,16769,17912,21610,22057,26036,26323,
#Deleted in new
chr11	31784791	31811331	chr11:31784791-31811331	1	-	31789933	31806411	0	13	5228,151,116,151,83,159,166,216,131,61,77,188,217,	0,5918,8646,8860,9240,9838,15899,16769,17912,21610,22057,26036,26323,
#Deleted in new
chr11	31788907	31817961	chr11:31788907-31817961	1	-	31789933	31806411	0	12	1112,151,116,151,83,159,166,216,131,61,77,153,	0,1802,4530,4744,5124,5722,11783,12653,13796,17494,17941,28901,
#Deleted in new
chr11	31788907	31811331	chr11:31788907-31811331	1	-	31789933	31806411	0	13	1112,151,116,151,83,159,166,216,131,61,77,188,119,	0,1802,4530,4744,5124,5722,11783,12653,13796,17494,17941,21920,22305,
#Deleted in new
chr11	31788910	31810667	chr11:31788910-31810667	1	-	31789933	31806411	0	12	1109,151,116,151,83,159,166,216,131,61,77,762,	0,1799,4527,4741,5121,5719,11780,12650,13793,17491,17938,20995,
#Deleted in new
chr11	31788911	31817961	chr11:31788911-31817961	3	-	31789933	31806411	0	13	1108,151,116,151,83,159,166,216,42,131,61,77,153,	0,1798,4526,4740,5120,5718,11779,12649,12959,13792,17490,17937,28897,
#Deleted in new
chr11	31789025	31812823	chr11:31789025-31812823	1	-	31789629	31806411	789624	8	994,116,151,83,159,61,77,731,	0,4412,4626,5006,5604,17376,17823,23067,
#Deleted in new
chr11	31789025	31811144	chr11:31789025-31811144	1	-	31789933	31806411	0	12	994,151,116,151,83,159,166,216,131,61,77,317,	0,1684,4412,4626,5006,5604,11665,12535,13678,17376,17823,21802,
#Deleted in new
chr11	31789025	31817961	chr11:31789025-31817961	1	-	31789933	31806411	0	14	994,151,116,151,83,159,166,216,42,131,61,77,188,153,	0,1684,4412,4626,5006,5604,11665,12535,12845,13678,17376,17823,21802,28783,
#Deleted in new
chr11	31789193	31810305	chr11:31789193-31810305	1	-	31789933	31806411	0	13	826,151,116,151,83,159,166,216,42,131,61,77,400,	0,1516,4244,4458,4838,5436,11497,12367,12677,13510,17208,17655,20712,
#Deleted in new
chr11	31789194	31818062	chr11:31789194-31818062	1	-	31789933	31806411	0	14	825,151,116,151,83,159,166,216,42,131,61,77,188,254,	0,1515,4243,4457,4837,5435,11496,12366,12676,13509,17207,17654,21633,28614,
#Deleted in new
chr11	31789201	31812183	chr11:31789201-31812183	1	-	31789933	31806411	0	14	818,151,116,151,83,159,166,216,42,131,61,77,188,91,	0,1508,4236,4450,4830,5428,11489,12359,12669,13502,17200,17647,21626,22891,
#Deleted in new
chr11	31789201	31812342	chr11:31789201-31812342	1	-	31789933	31806411	0	14	818,151,116,151,83,159,166,216,42,131,61,77,188,194,	0,1508,4236,4450,4830,5428,11489,12359,12669,13502,17200,17647,21626,22947,
#Deleted in new
chr11	31789516	31806456	chr11:31789516-31806456	1	-	31789629	31806411	789624	9	503,116,151,83,159,166,216,131,55,	0,3921,4135,4515,5113,11174,12044,13187,16885,
#Deleted in new
chr11	31789829	31817937	chr11:31789829-31817937	1	-	31789933	31794708	789624	7	190,151,116,151,83,159,129,	0,880,3608,3822,4202,4800,27979,
#Deleted in new
chr11	31789912	31817938	chr11:31789912-31817938	1	-	31789933	31806411	0	13	107,151,116,151,83,159,166,216,131,61,77,188,130,	0,797,3525,3739,4119,4717,10778,11648,12791,16489,16936,20915,27896,
#Deleted in new
chr11	31789917	31811328	chr11:31789917-31811328	0	-	31789917	31789917	8553170	12	102,2844,151,83,159,166,216,131,61,77,188,214,	0,792,3734,4114,4712,10773,11643,12786,16484,16931,20910,21197,
#Deleted in new
chr11	31789933	31804237	chr11:31789933-31804237	1	-	31789933	31800805	789624	11	86,151,116,151,83,159,166,216,42,131,286,	0,776,3504,3718,4098,4696,10757,11627,11937,12770,14018,
#Deleted in new
chr11	31789933	31804046	chr11:31789933-31804046	1	-	31789933	31800805	789624	10	86,151,116,151,83,159,166,547,42,1343,	0,776,3504,3718,4098,4696,10757,11296,11937,12770,
#Deleted in new
chr11	31789933	31806411	chr11:31789933-31806411	1	-	31789933	31806411	789624	11	86,151,116,151,83,159,166,108,42,131,10,	0,776,3504,3718,4098,4696,10757,11735,11937,12770,16468,
#Deleted in new
chr11	31789933	31806411	chr11:31789933-31806411	1	-	31789933	31806411	789624	10	86,151,116,151,83,159,166,108,131,10,	0,776,3504,3718,4098,4696,10757,11735,12770,16468,
#Deleted in new
chr11	31789933	31804415	chr11:31789933-31804415	1	-	31789933	31800805	789624	10	86,151,116,151,83,159,166,216,131,464,	0,776,3504,3718,4098,4696,10757,11627,12770,14018,
#Deleted in new
chr11	31789933	31804175	chr11:31789933-31804175	1	-	31789933	31800805	789624	11	86,151,116,151,83,159,166,108,42,131,224,	0,776,3504,3718,4098,4696,10757,11735,11937,12770,14018,
#Deleted in new
chr11	31789933	31804175	chr11:31789933-31804175	1	-	31789933	31800805	789624	10	86,151,116,151,83,159,166,108,131,224,	0,776,3504,3718,4098,4696,10757,11735,12770,14018,
#Deleted in new
chr11	31789935	31804460	chr11:31789935-31804460	0	-	31789935	31789935	8553170	8	84,151,116,151,83,159,1086,1757,	0,774,3502,3716,4096,4694,10755,12768,
#Deleted in new
chr11	31789935	31811308	chr11:31789935-31811308	0	-	31789935	31789935	8553170	11	84,151,116,151,83,159,166,4902,77,188,96,	0,774,3502,3716,4096,4694,10755,11625,16913,20892,21277,
#Deleted in new
chr11	31789935	31806629	chr11:31789935-31806629	0	-	31789935	31806411	0	10	84,151,116,151,83,159,166,216,131,228,	0,774,3502,3716,4096,4694,10755,11625,12768,16466,
#Deleted in new
chr11	31789937	31811118	chr11:31789937-31811118	0	-	31789937	31806411	789624	13	82,151,116,151,83,159,166,15,42,131,61,77,291,	0,772,3500,3714,4094,4692,10753,11824,11933,12766,16464,16911,20890,
#Deleted in new
chr11	31789940	31817910	chr11:31789940-31817910	0	-	31789940	31806411	789624	14	79,151,116,151,83,159,166,15,42,131,61,77,188,102,	0,769,3497,3711,4091,4689,10750,11821,11930,12763,16461,16908,20887,27868,
#Deleted in new
chr11	31789945	31811952	chr11:31789945-31811952	0	-	31789945	31806411	789624	13	74,151,116,151,83,159,166,216,131,61,77,188,145,	0,764,3492,3706,4086,4684,10745,11615,12758,16456,16903,20882,21862,
#Deleted in new
chr11	31789945	31811121	chr11:31789945-31811121	0	-	31789945	31789945	8553170	10	74,151,116,1137,166,216,131,61,77,294,	0,764,3492,3706,10745,11615,12758,16456,16903,20882,
#Deleted in new
chr11	31789945	31803245	chr11:31789945-31803245	0	-	31789945	31800805	789624	10	74,151,116,151,83,159,166,216,131,226,	0,764,3492,3706,4086,4684,10745,11615,12758,13074,
#Deleted in new
chr11	31789945	31813131	chr11:31789945-31813131	0	-	31789945	31806411	789624	13	74,151,116,151,83,159,166,216,131,61,77,188,560,	0,764,3492,3706,4086,4684,10745,11615,12758,16456,16903,20882,22626,
#Deleted in new
chr11	31789945	31805795	chr11:31789945-31805795	0	-	31789945	31800805	789624	11	74,151,116,151,83,159,166,216,131,143,407,	0,764,3492,3706,4086,4684,10745,11615,12758,13638,15443,
#Deleted in new
chr11	31789945	31806916	chr11:31789945-31806916	0	-	31789945	31806411	789624	11	74,116,151,83,159,166,216,42,131,61,68,	0,3492,3706,4086,4684,10745,11615,11925,12758,16456,16903,
#Deleted in new
chr11	31789946	31811322	chr11:31789946-31811322	0	-	31789946	31800805	789624	14	73,151,116,151,83,159,166,216,131,143,61,77,188,208,	0,763,3491,3705,4085,4683,10744,11614,12757,13637,16455,16902,20881,21168,
#Deleted in new
chr11	31789946	31800651	chr11:31789946-31800651	0	-	31789946	31789946	8553170	7	73,151,116,151,83,159,113,	0,763,3491,3705,4085,4683,10592,
#Deleted in new
chr11	31789946	31802946	chr11:31789946-31802946	0	-	31789946	31789946	8553170	7	73,116,151,83,159,1086,243,	0,3491,3705,4085,4683,10744,12757,
#Deleted in new
chr11	31789946	31811057	chr11:31789946-31811057	0	-	31789946	31800805	789624	11	73,151,116,151,83,159,166,216,61,77,230,	0,763,3491,3705,4085,4683,10744,11614,16455,16902,20881,
#Deleted in new
chr11	31789948	31794323	chr11:31789948-31794323	0	-	31789948	31789948	8553170	5	71,151,116,151,292,	0,761,3489,3703,4083,
#Deleted in new
chr11	31789950	31812745	chr11:31789950-31812745	0	-	31789950	31806411	789624	13	69,151,116,151,83,159,166,216,131,61,77,188,653,	0,759,3487,3701,4081,4679,10740,11610,12753,16451,16898,20877,22142,
#Deleted in new
chr11	31789951	31803960	chr11:31789951-31803960	0	-	31789951	31800805	789624	9	68,151,116,151,83,159,166,216,1257,	0,758,3486,3700,4080,4678,10739,11609,12752,
#Deleted in new
chr11	31789956	31811068	chr11:31789956-31811068	0	-	31801467	31806411	789624	13	63,151,116,151,83,159,166,547,42,131,61,77,241,	0,753,3481,3695,4075,4673,10734,11273,11914,12747,16445,16892,20871,
#Deleted in new
chr11	31789961	31805467	chr11:31789961-31805467	0	-	31789961	31800805	789624	12	58,151,116,151,83,159,166,97,15,42,131,79,	0,748,3476,3690,4070,4668,10729,11268,11800,11909,12742,15427,
#Deleted in new
chr11	31789961	31811341	chr11:31789961-31811341	0	-	31789961	31789961	8553170	12	58,151,116,151,83,159,1086,131,61,77,188,129,	0,748,3476,3690,4070,4668,10729,12742,16440,16887,20866,21251,
#Deleted in new
chr11	31789961	31804006	chr11:31789961-31804006	0	-	31789961	31800805	789624	9	58,151,116,151,83,159,166,547,1303,	0,748,3476,3690,4070,4668,10729,11268,12742,
#Deleted in new
chr11	31789961	31807656	chr11:31789961-31807656	0	-	31789961	31806411	789624	12	58,151,116,151,83,159,166,216,131,61,77,367,	0,748,3476,3690,4070,4668,10729,11599,12742,16440,16887,17328,
#Deleted in new
chr11	31789961	31801992	chr11:31789961-31801992	0	-	31789961	31789961	8553170	6	58,151,116,1137,166,432,	0,748,3476,3690,10729,11599,
#Deleted in new
chr11	31790005	31803673	chr11:31790005-31803673	0	-	31790005	31800805	789624	11	14,151,116,151,83,159,166,216,42,131,276,	0,704,3432,3646,4026,4624,10685,11555,11865,12698,13392,
#Deleted in new
chr11	31790013	31804267	chr11:31790013-31804267	0	-	31790013	31800805	789624	10	6,151,116,151,83,159,166,216,131,684,	0,696,3424,3638,4018,4616,10677,11547,12690,13570,
#Deleted in new
chr11	31790717	31800667	chr11:31790717-31800667	0	-	31790717	31790717	8553170	6	143,116,151,83,159,133,	0,2720,2934,3314,3912,9817,
#Deleted in new
chr11	31790726	31811322	chr11:31790726-31811322	0	-	31790726	31806411	789624	13	134,116,151,83,159,166,15,42,131,61,77,188,208,	0,2711,2925,3305,3903,9964,11035,11144,11977,15675,16122,20101,20388,
#Deleted in new
chr11	31790737	31803620	chr11:31790737-31803620	0	-	31790737	31800805	789624	11	123,116,151,83,159,166,97,216,42,131,223,	0,2700,2914,3294,3892,9953,10492,10823,11133,11966,12660,
#Deleted in new
chr11	31790761	31811118	chr11:31790761-31811118	0	-	31790761	31790761	8553170	10	99,116,151,83,159,1086,131,61,77,291,	0,2676,2890,3270,3868,9929,11942,15640,16087,20066,
#Deleted in new
chr11	31790762	31810124	chr11:31790762-31810124	0	-	31790762	31806411	789624	8	98,116,151,83,159,61,77,219,	0,2675,2889,3269,3867,15639,16086,19143,
#Deleted in new
chr11	31790768	31804258	chr11:31790768-31804258	0	-	31790768	31800805	789624	9	92,116,151,83,159,166,216,42,1555,	0,2669,2883,3263,3861,9922,10792,11102,11935,
#Deleted in new
chr11	31790773	31811231	chr11:31790773-31811231	0	-	31790773	31806411	789624	13	87,116,151,83,159,166,15,42,131,61,77,188,119,	0,2664,2878,3258,3856,9917,10988,11097,11930,15628,16075,20054,20339,
#Deleted in new
chr11	31790789	31803673	chr11:31790789-31803673	0	-	31790789	31800805	789624	9	71,116,151,83,159,166,216,131,276,	0,2648,2862,3242,3840,9901,10771,11914,12608,
#Deleted in new
chr11	31790790	31808802	chr11:31790790-31808802	0	-	31790790	31806411	789624	12	70,116,151,83,159,166,15,42,131,61,77,1513,	0,2647,2861,3241,3839,9900,10971,11080,11913,15611,16058,16499,
#Deleted in new
chr11	31790822	31814976	chr11:31790822-31814976	0	-	31790822	31806411	789624	13	38,116,151,83,159,166,216,42,131,61,77,188,609,	0,2615,2829,3209,3807,9868,10738,11048,11881,15579,16026,20005,23545,
#Deleted in new
chr11	31793172	31794126	chr11:31793172-31794126	0	-	31793172	31793172	8553170	3	381,151,95,	0,479,859,
#Deleted in new
chr11	31793208	31811331	chr11:31793208-31811331	1	-	31793263	31806411	789624	11	345,151,83,159,166,216,131,61,77,188,217,	0,443,823,1421,7482,8352,9495,13193,13640,17619,17906,
#Deleted in new
chr11	31793218	31802014	chr11:31793218-31802014	0	-	31793218	31793218	8553170	6	335,151,83,159,1086,144,	0,433,813,1411,7472,8652,
#Deleted in new
chr11	31793223	31811331	chr11:31793223-31811331	0	-	31793223	31793223	8553170	11	330,151,83,159,1086,42,131,61,77,188,217,	0,428,808,1406,7467,8647,9480,13178,13625,17604,17891,
#Deleted in new
chr11	31793246	31810991	chr11:31793246-31810991	1	-	31793263	31806411	789624	11	307,151,83,159,166,216,42,131,61,77,164,	0,405,785,1383,7444,8314,8624,9457,13155,13602,17581,
#Deleted in new
chr11	31793272	31804255	chr11:31793272-31804255	0	-	31793272	31800805	789624	7	281,151,83,159,166,216,1552,	0,379,759,1357,7418,8288,9431,
#Deleted in new
chr11	31793448	31811114	chr11:31793448-31811114	0	-	31793448	31810840	789624	8	105,151,83,159,166,216,131,287,	0,203,583,1181,7242,8112,9255,17379,
#Deleted in new
chr11	31794629	31811689	chr11:31794629-31811689	0	-	31794629	31806411	789624	9	159,166,216,42,131,61,77,188,162,	0,6061,6931,7241,8074,11772,12219,16198,16898,
#Deleted in new
chr11	31801463	31803673	chr11:31801463-31803673	0	-	31801463	31801463	8553170	5	313,42,131,74,90,	0,407,1240,1934,2120,
#Deleted in new
chr11	31801577	31804619	chr11:31801577-31804619	0	-	31801577	31801577	8553170	4	199,42,131,168,	0,293,1126,2874,
#Deleted in new
chr11	31801726	31806013	chr11:31801726-31806013	0	-	31801726	31801726	8553170	4	50,42,131,625,	0,144,977,3662,
#Deleted in new
chr11	31801741	31807619	chr11:31801741-31807619	0	-	31801741	31806411	789624	6	35,42,131,61,77,330,	0,129,962,4660,5107,5548,
#Deleted in new
chr11	31802739	31806884	chr11:31802739-31806884	0	-	31802739	31802739	8553170	3	987,61,36,	0,3662,4109,
#Deleted in new
chr11	31806343	31811118	chr11:31806343-31811118	0	-	31806343	31806343	8553170	3	119,77,291,	0,505,4484,
#Deleted in new
chr11	31806343	31817948	chr11:31806343-31817948	0	-	31806343	31806343	8553170	4	119,77,188,140,	0,505,4484,11465,
#Deleted in new
chr11	31806401	31812829	chr11:31806401-31812829	0	-	31806401	31806411	8553170	3	61,77,737,	0,447,5691,
#Deleted in new
chr11	31806430	31811270	chr11:31806430-31811270	0	-	31806430	31806430	8553170	4	32,77,97,443,	0,418,2874,4397,
#Deleted in new
chr11	31809745	31810162	chr11:31809745-31810162	0	-	31809745	31809745	8553170	1	417,	0,
#Deleted in new
chr11	31810342	31810924	chr11:31810342-31810924	0	-	31810342	31810342	8553170	2	315,97,	0,485,
#Deleted in new
chr11	31810870	31811663	chr11:31810870-31811663	0	-	31810870	31810870	8553170	3	145,137,250,	0,244,543,
#Deleted in new
chr11	31810900	31817932	chr11:31810900-31817932	0	-	31810900	31810900	8553170	3	115,129,124,	0,1248,6908,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	31812306	31829264	chr11:31812306-31829264	1	+	31812306	31812306	8553170	3	191,171,1877,	0,4162,15081,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	31812333	31829048	chr11:31812333-31829048	0	+	31812333	31812333	8553170	2	164,1560,	0,15155,
#Partially deleted in new
chr11	31812390	32100594	chr11:31812390-32100594	0	+	32098399	32100594	789624	4	107,194,179,47,	0,284753,285959,288157,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	31812428	31829282	chr11:31812428-31829282	0	+	31812428	31812428	8553170	3	69,171,1872,	0,4040,14982,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	31814150	31829282	chr11:31814150-31829282	0	+	31814150	31814150	8553170	3	166,171,1895,	0,2318,13237,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	31816265	32002405	chr11:31816265-32002405	3	+	31816265	31816265	8553170	4	374,512,255,1200,	0,69028,183459,184940,
#Partially deleted in new
chr11	31816357	32002120	chr11:31816357-32002120	1	+	31816357	31816357	8553170	6	282,53,154,91,255,915,	0,122392,128566,142357,183367,184848,
#Partially deleted in new
chr11	31816383	32104665	chr11:31816383-32104665	3	+	31816538	32104472	8553170	6	256,194,179,61,200,301,	0,280760,281966,284164,286897,287981,
#Partially deleted in new
chr11	31816386	32002387	chr11:31816386-32002387	0	+	31816386	31816386	8553170	4	253,91,137,1182,	0,142328,183456,184819,
#Partially deleted in new
chr11	31816401	32002359	chr11:31816401-32002359	1	+	31816401	31816401	8553170	4	238,232,192,1154,	0,86995,183386,184804,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	31816515	31829241	chr11:31816515-31829241	0	+	31816515	31816515	8553170	2	124,1753,	0,10973,
#Partially deleted in new
chr11	31816562	32002357	chr11:31816562-32002357	0	+	31816562	31816562	8553170	4	77,91,134,1152,	0,142152,183283,184643,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	31816565	31887043	chr11:31816565-31887043	0	+	31816565	31816565	789624	3	74,81,1503,	0,68728,68975,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	31816565	31886714	chr11:31816565-31886714	0	+	31816565	31816565	8553170	3	74,109,1421,	0,12933,68728,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	31816606	31887006	chr11:31816606-31887006	0	+	31816606	31816606	8553170	2	33,1713,	0,68687,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	31826322	31829265	chr11:31826322-31829265	0	+	31826322	31826322	8553170	2	111,1777,	0,1166,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	31826340	31829251	chr11:31826340-31829251	0	+	31826340	31826340	8553170	2	230,1841,	0,1070,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	31826346	31829311	chr11:31826346-31829311	0	+	31826346	31826346	789624	1	2965,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	31826467	31829280	chr11:31826467-31829280	0	+	31826467	31826467	8553170	2	103,1893,	0,920,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	31885773	31918339	chr11:31885773-31918339	0	+	31885773	31885773	8553170	2	32,1001,	0,31565,
#Partially deleted in new
chr11	32035980	32041318	chr11:32035980-32041318	3	-	32035980	32035980	789624	3	268,341,211,	0,675,5127,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	32040105	32041248	chr11:32040105-32041248	1	-	32040105	32040105	789624	2	272,141,	0,1002,
#Deleted in new
chr11	32052842	32053260	chr11:32052842-32053260	3	-	32052842	32052842	8553170	2	127,114,	0,304,
#Partially deleted in new
chr11	32064911	32072173	chr11:32064911-32072173	3	+	32064911	32064911	8553170	3	28,104,194,	0,2546,7068,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	32081763	32081973	chr11:32081763-32081973	3	+	32081763	32081763	8553170	1	210,	0,
#Deleted in new
chr11	32085110	32085712	chr11:32085110-32085712	7	+	32085110	32085110	16724991	2	309,190,	0,412,
#Partially deleted in new
chr11	32090903	32105755	chr11:32090903-32105755	3	+	32091196	32104472	789624	6	547,194,179,61,200,1391,	0,6240,7446,9644,12377,13461,
#Partially deleted in new
chr11	32091609	32098458	chr11:32091609-32098458	0	+	32098399	32098458	789624	3	191,194,109,	0,5534,6740,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	32096533	32105536	chr11:32096533-32105536	0	+	32096533	32096533	8553170	5	804,179,61,200,1172,	0,1816,4014,6747,7831,
#Partially deleted in new
chr11	32097142	32105091	chr11:32097142-32105091	3	-	32097142	32097142	8553170	2	64,86,	0,7863,
#Partially deleted in new
chr11	32100531	32104602	chr11:32100531-32104602	0	+	32100531	32100531	8553170	4	77,199,200,238,	0,2472,2749,3833,
#Partially deleted in new
chr11	32100546	32104684	chr11:32100546-32104684	0	+	32100546	32103113	789624	4	62,155,200,320,	0,2457,2734,3818,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	32101994	32105531	chr11:32101994-32105531	0	+	32101994	32101994	8553170	2	1486,1167,	0,2370,
#Deleted in new
chr11	32104385	32105532	chr11:32104385-32105532	0	+	32104385	32104472	789624	2	303,246,	0,901,
#Partially deleted in new
chr11	32112048	32254395	chr11:32112048-32254395	7	-	32112048	32112048	16724991	3	380,242,50,	0,118071,142297,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	32132698	32143579	chr11:32132698-32143579	3	+	32132698	32132698	8553170	3	88,122,436,	0,4422,10445,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	32136907	32143719	chr11:32136907-32143719	0	+	32136907	32136907	8553170	2	335,576,	0,6236,
#Partially deleted in new
chr11	32229719	32343409	chr11:32229719-32343409	5	-	32229719	32229719	16724991	2	642,122,	0,113568,
#Partially deleted in new
chr11	32387774	32435630	chr11:32387774-32435630	1	-	32389057	32435345	789624	10	1405,93,90,151,97,51,78,103,123,931,	0,4197,4891,8482,12173,28715,29802,40181,40722,46925,
#Partially deleted in new
chr11	32387774	32435387	chr11:32387774-32435387	0	-	32417572	32435345	789624	10	1405,93,90,151,97,51,231,103,123,688,	0,4197,4891,8482,12173,28715,29649,40181,40722,46925,
#Partially deleted in new
chr11	32387774	32430813	chr11:32387774-32430813	1	-	32389057	32430539	789624	10	1405,84,90,151,97,51,78,103,123,284,	0,4206,4891,8482,12173,28715,29802,40181,40722,42755,
#Partially deleted in new
chr11	32387777	32430813	chr11:32387777-32430813	1	-	32389057	32430539	789624	9	1402,93,90,151,97,78,103,123,284,	0,4194,4888,8479,12170,29799,40178,40719,42752,
#Partially deleted in new
chr11	32387783	32435345	chr11:32387783-32435345	1	-	32389057	32435345	789624	9	1396,84,90,151,97,78,103,123,646,	0,4197,4882,8473,12164,29793,40172,40713,46916,
#Partially deleted in new
chr11	32388678	32435535	chr11:32388678-32435535	1	-	32389057	32435345	789624	10	501,84,90,151,97,51,78,103,123,836,	0,3302,3987,7578,11269,27811,28898,39277,39818,46021,
#Partially deleted in new
chr11	32389041	32417597	chr11:32389041-32417597	0	-	32389057	32417597	789624	6	138,93,151,97,51,21,	0,2930,7215,10906,27448,28535,
#Partially deleted in new
chr11	32389057	32435345	chr11:32389057-32435345	1	-	32389057	32435345	789624	9	122,84,90,151,97,78,103,123,646,	0,2923,3608,7199,10890,28519,38898,39439,45642,
#Partially deleted in new
chr11	32389057	32435345	chr11:32389057-32435345	1	-	32389057	32435345	789624	10	122,84,90,151,97,51,78,103,123,646,	0,2923,3608,7199,10890,27432,28519,38898,39439,45642,
#Partially deleted in new
chr11	32389057	32435345	chr11:32389057-32435345	3	-	32389057	32435345	789624	10	122,93,90,151,97,51,78,103,123,646,	0,2914,3608,7199,10890,27432,28519,38898,39439,45642,
#Partially deleted in new
chr11	32396256	32400615	chr11:32396256-32400615	0	-	32396256	32396332	789624	3	151,97,470,	0,3691,3889,
#Partially deleted in new
chr11	32396365	32429029	chr11:32396365-32429029	0	-	32396365	32428518	789624	7	42,97,51,78,103,123,84,	0,3582,20124,21211,31590,32131,32580,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	32435517	32438707	chr11:32435517-32438707	0	+	32435517	32435517	789624	3	329,128,863,	0,1552,2327,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	32435578	32441404	chr11:32435578-32441404	3	+	32435578	32435578	8553170	2	268,3560,	0,2266,
#Deleted in new
chr11	32435737	32435846	chr11:32435737-32435846	3	+	32435737	32435737	8553170	1	109,	0,
#Deleted in new
chr11	32435775	32437051	chr11:32435775-32437051	0	+	32435775	32435775	8553170	2	71,257,	0,1019,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	32435800	32458769	chr11:32435800-32458769	0	+	32435800	32435800	789624	5	46,111,917,49,131,	0,16220,17461,22114,22838,
#Deleted in new
chr11	32436310	32436447	chr11:32436310-32436447	3	+	32436310	32436310	8553170	1	137,	0,
#Deleted in new
chr11	32436796	32437030	chr11:32436796-32437030	3	+	32436796	32436796	8553170	1	234,	0,
#Deleted in new
chr11	32437069	32437197	chr11:32437069-32437197	0	+	32437069	32437069	8553170	1	128,	0,
#Deleted in new
chr11	32437622	32438326	chr11:32437622-32438326	0	+	32437622	32437622	8553170	2	79,482,	0,222,
#Deleted in new
chr11	32437622	32437701	chr11:32437622-32437701	0	+	32437622	32437622	8553170	1	79,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	32438369	32439132	chr11:32438369-32439132	0	+	32438369	32438369	8553170	2	221,261,	0,502,
#Deleted in new
chr11	32439085	32439206	chr11:32439085-32439206	3	+	32439085	32439085	8553170	1	121,	0,
#Deleted in new
chr11	32439715	32440009	chr11:32439715-32440009	3	+	32439715	32439715	8553170	1	294,	0,
#Deleted in new
chr11	32440108	32440383	chr11:32440108-32440383	3	+	32440108	32440108	8553170	1	275,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	32583797	32596015	chr11:32583797-32596015	0	+	32583887	32589604	789624	6	132,133,139,95,1148,50,	0,3214,4796,5749,10068,12168,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	32583824	32606262	chr11:32583824-32606262	3	+	32583887	32602399	0	11	105,133,139,124,95,84,100,82,144,61,3984,	0,3187,4769,5187,5722,10041,11089,12141,16864,17937,18454,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	32583831	32601501	chr11:32583831-32601501	0	+	32583887	32593953	789624	5	98,95,1148,82,813,	0,5715,10034,12134,16857,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	32583831	32588927	chr11:32583831-32588927	0	+	32583831	32583831	8553170	3	98,133,334,	0,3180,4762,
#Partially deleted in new
chr11	32583833	32602823	chr11:32583833-32602823	1	+	32583887	32602399	0	8	96,95,84,100,82,144,61,545,	0,5713,10032,11080,12132,16855,17928,18445,
#Partially deleted in new
chr11	32583837	32593949	chr11:32583837-32593949	0	+	32583887	32587096	789624	6	92,99,139,124,95,84,	0,3208,4756,5174,5709,10028,
#Partially deleted in new
chr11	32583838	32596010	chr11:32583838-32596010	0	+	32588607	32596010	789624	8	91,211,139,124,95,84,100,45,	0,3095,4755,5173,5708,10027,11075,12127,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	32583847	32600793	chr11:32583847-32600793	0	+	32583887	32589551	789624	6	82,133,95,1148,82,105,	0,3164,5699,10018,12118,16841,
#Partially deleted in new
chr11	32583883	32594097	chr11:32583883-32594097	0	+	32583883	32583883	8553170	6	46,133,139,124,95,232,	0,3128,4710,5128,5663,9982,
#Partially deleted in new
chr11	32583975	32588681	chr11:32583975-32588681	0	+	32583975	32583975	8553170	3	311,133,88,	0,3036,4618,
#Partially deleted in new
chr11	32584068	32589603	chr11:32584068-32589603	0	+	32588607	32589603	789624	5	218,211,139,124,57,	0,2865,4525,4943,5478,
#Partially deleted in new
chr11	32589585	32602377	chr11:32589585-32602377	0	+	32589585	32602377	789624	8	56,84,100,82,144,61,36,99,	0,4280,5328,6380,11103,12176,12493,12693,
#Partially deleted in new
chr11	32591792	32592771	chr11:32591792-32592771	7	-	32591792	32591792	16724991	1	979,	0,
#Partially deleted in new
chr11	32593768	32602302	chr11:32593768-32602302	0	+	32593768	32593768	8553170	6	181,100,82,144,61,24,	0,1145,2197,6920,7993,8510,
#Partially deleted in new
chr11	32602245	32794641	chr11:32602245-32794641	3	-	32602810	32760243	789624	18	775,134,1521,190,135,111,105,60,129,80,136,39,75,36,72,72,150,29,	0,8886,11176,13694,33450,39726,50877,51732,52598,73319,73640,81290,97005,98545,100627,115830,157863,192367,
#Partially deleted in new
chr11	32602724	32635832	chr11:32602724-32635832	0	-	32602810	32635832	789624	2	296,137,	0,32971,
#Partially deleted in new
chr11	32615869	32794658	chr11:32615869-32794658	0	-	32615869	32615869	8553170	15	260,135,111,75,60,129,80,136,39,75,36,72,72,150,46,	0,19826,26102,37253,38108,38974,59695,60016,67666,83381,84921,87003,102206,144239,178743,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	32679860	32794610	chr11:32679860-32794610	1	-	32683487	32760243	789624	7	3714,75,36,72,72,150,262,	0,19390,20930,23012,38215,80248,114488,
#Partially deleted in new
chr11	32758267	32758614	chr11:32758267-32758614	7	+	32758267	32758267	16724991	1	347,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	32829942	32858123	chr11:32829942-32858123	3	+	32830529	32853527	789624	6	231,125,164,49,133,4828,	0,565,6715,8939,10164,23353,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	32892819	32980266	chr11:32892819-32980266	1	+	32893125	32976474	8553170	13	515,113,162,3693,323,117,134,218,138,98,153,96,3933,	0,34337,35142,38923,61037,62476,63168,65049,73480,76226,80577,82428,83514,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	32893245	32980270	chr11:32893245-32980270	3	+	32928026	32976474	789624	13	89,113,162,3693,323,117,134,218,138,98,153,96,3937,	0,33911,34716,38497,60611,62050,62742,64623,73054,75800,80151,82002,83088,
#Partially deleted in new
chr11	32893259	32932002	chr11:32893259-32932002	0	+	32893259	32932002	8553170	3	75,113,260,	0,33897,38483,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr11	32925971	32993316	chr11:32925971-32993316	0	+	32925971	32925971	8553170	16	178,113,162,632,2344,323,117,134,218,138,98,153,96,120,67,159,	0,1185,1990,5771,7120,27885,29324,30016,31897,40328,43074,47425,49276,50362,58187,67186,
#Partially deleted in new
chr11	32926708	32931837	chr11:32926708-32931837	0	+	32926708	32926708	8553170	3	561,162,95,	0,1253,5034,
#Partially deleted in new
chr11	32934583	32975630	chr11:32934583-32975630	0	+	32934583	32975556	789624	9	852,323,117,134,218,138,98,153,383,	0,19273,20712,21404,23285,31716,34462,38813,40664,
#Partially deleted in new
chr11	32957805	32969068	chr11:32957805-32969068	0	+	32957805	32957805	8553170	2	281,23,	0,11240,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	33004249	33004345	chr11:33004249-33004345	3	-	33004249	33004249	8553170	1	96,	0,
#Partially deleted in new
chr11	33015863	33033582	chr11:33015863-33033582	3	+	33015955	33033455	789624	9	165,391,128,190,212,143,126,79,321,	0,9795,11822,12739,15514,16472,16804,17025,17398,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	33015875	33026717	chr11:33015875-33026717	0	+	33015875	33015875	8553170	2	153,1059,	0,9783,
#Partially deleted in new
chr11	33015910	33028294	chr11:33015910-33028294	0	+	33015910	33015910	8553170	3	118,391,609,	0,9748,11775,
#Partially deleted in new
chr11	33016163	33033582	chr11:33016163-33033582	1	+	33016539	33033455	789624	9	422,391,128,190,212,143,126,79,321,	0,9495,11522,12439,15214,16172,16504,16725,17098,
#Partially deleted in new
chr11	33039416	33073563	chr11:33039416-33073563	3	+	33043773	33072676	789624	10	376,187,133,121,221,137,197,182,173,1090,	0,4333,15176,17698,18502,19542,22113,26413,29270,33057,
#Partially deleted in new
chr11	33039416	33057933	chr11:33039416-33057933	0	+	33043773	33057933	789624	6	376,73,187,133,121,15,	0,713,4333,15176,17698,18502,
#Partially deleted in new
chr11	33039416	33044112	chr11:33039416-33044112	0	+	33039416	33039416	8553170	2	376,363,	0,4333,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	33039571	33105942	chr11:33039571-33105942	0	+	33043773	33085120	789624	13	221,187,133,121,221,137,197,182,173,180,110,249,357,	0,4178,15021,17543,18347,19387,21958,26258,29115,32902,41543,45378,66014,
#Partially deleted in new
chr11	33039586	33058096	chr11:33039586-33058096	0	+	33039586	33039586	8553170	3	206,187,178,	0,4163,18332,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	33039785	33072845	chr11:33039785-33072845	0	+	33043773	33057147	789624	11	1531,187,133,136,121,221,137,197,182,173,372,	0,3964,14807,16802,17329,18133,19173,21744,26044,28901,32688,
#Partially deleted in new
chr11	33039801	33057136	chr11:33039801-33057136	0	+	33043773	33057136	789624	4	405,187,133,22,	0,3948,14791,17313,
#Partially deleted in new
chr11	33040014	33073563	chr11:33040014-33073563	1	+	33043773	33072676	789624	10	192,187,133,121,221,137,197,182,173,1090,	0,3735,14578,17100,17904,18944,21515,25815,28672,32459,
#Partially deleted in new
chr11	33040027	33043936	chr11:33040027-33043936	0	+	33043773	33043936	789624	2	360,187,	0,3722,
#Partially deleted in new
chr11	33040030	33072848	chr11:33040030-33072848	1	+	33043773	33072676	789624	10	172,187,133,121,221,137,197,182,173,375,	0,3719,14562,17084,17888,18928,21499,25799,28656,32443,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	33068686	33105943	chr11:33068686-33105943	0	+	33068686	33105707	789624	3	173,180,358,	0,3787,36899,
#Deleted in new
chr11	33075565	33076460	chr11:33075565-33076460	7	-	33075565	33075565	16724991	1	895,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	33076148	33079454	chr11:33076148-33079454	3	+	33076148	33076148	789624	1	3306,	0,
#Partially deleted in new
chr11	33077187	33085904	chr11:33077187-33085904	0	-	33085086	33085904	789624	4	263,258,61,10,	0,7844,8525,8707,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	33141464	33161491	chr11:33141464-33161491	1	-	33141878	33161325	0	2	522,193,	0,19834,
#Partially deleted in new
chr11	33161656	33190294	chr11:33161656-33190294	1	+	33161656	33161656	8553170	3	125,81,362,	0,27113,28276,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	33161687	33191598	chr11:33161687-33191598	3	+	33161687	33161687	789624	4	94,81,190,1666,	0,27082,27680,28245,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	33186819	33191598	chr11:33186819-33191598	0	+	33186819	33186819	8553170	2	2031,1666,	0,3113,
#Deleted in new
chr11	33190061	33190503	chr11:33190061-33190503	7	-	33190061	33190061	16724991	1	442,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	33196546	33196637	chr11:33196546-33196637	3	-	33196546	33196546	8553170	1	91,	0,
#Deleted in new
chr11	33237007	33237409	chr11:33237007-33237409	7	+	33237007	33237007	16724991	1	402,	0,
#Partially deleted in new
chr11	33256671	33353568	chr11:33256671-33353568	1	+	33286414	33353568	789624	16	81,1099,124,120,87,185,160,124,122,125,162,297,141,236,128,477,	0,29741,71838,80403,82085,82678,84296,84891,90621,90957,91180,91850,92475,94936,95466,96420,
#Partially deleted in new
chr11	33257586	33357023	chr11:33257586-33357023	3	+	33286414	33353568	789624	17	303,1099,124,120,87,185,160,124,122,125,162,63,297,141,236,128,3932,	0,28826,70923,79488,81170,81763,83381,83976,89706,90042,90265,90579,90935,91560,94021,94551,95505,
#Partially deleted in new
chr11	33257586	33357023	chr11:33257586-33357023	1	+	33286414	33353568	789624	16	303,1099,124,120,87,185,160,124,122,125,162,297,141,236,128,3932,	0,28826,70923,79488,81170,81763,83381,83976,89706,90042,90265,90935,91560,94021,94551,95505,
#Partially deleted in new
chr11	33258330	33357020	chr11:33258330-33357020	1	+	33286414	33353568	789624	16	360,1099,124,120,87,185,160,124,122,125,162,297,141,236,128,3929,	0,28082,70179,78744,80426,81019,82637,83232,88962,89298,89521,90191,90816,93277,93807,94761,
#Partially deleted in new
chr11	33258330	33286643	chr11:33258330-33286643	0	+	33286414	33286643	789624	2	360,231,	0,28082,
#Partially deleted in new
chr11	33328599	33338842	chr11:33328599-33338842	0	+	33328599	33328599	8553170	4	34,109,120,86,	0,7058,8475,10157,
#Partially deleted in new
chr11	33376465	33609892	chr11:33376465-33609892	0	+	33376651	33609892	789624	15	424,345,612,116,220,134,163,60,152,172,164,185,128,182,144,	0,165336,168301,171298,174574,175642,183283,185210,191610,198236,206872,214771,222354,230175,233283,
#Partially deleted in new
chr11	33403215	33403605	chr11:33403215-33403605	7	+	33403215	33403215	16724991	1	390,	0,
#Deleted in new
chr11	33450645	33450943	chr11:33450645-33450943	7	+	33450645	33450645	16724991	1	298,	0,
#Partially deleted in new
chr11	33542274	33674102	chr11:33542274-33674102	3	+	33542454	33668154	789624	20	2062,612,116,220,134,163,60,152,172,164,185,128,182,218,130,351,98,149,152,6230,	0,2492,5489,8765,9833,17474,19401,25801,32427,41063,48962,56545,64366,67474,76258,103411,113737,116475,118588,125598,
#Partially deleted in new
chr11	33542330	33599494	chr11:33542330-33599494	1	+	33542454	33598834	789624	11	2024,612,116,220,134,163,60,152,172,164,675,	0,2436,5433,8709,9777,17418,19345,25745,32371,41007,56489,
#Partially deleted in new
chr11	33698260	33700801	chr11:33698260-33700801	3	-	33698428	33700740	789624	2	254,557,	0,1984,
#Partially deleted in new
chr11	33698260	33722456	chr11:33698260-33722456	3	-	33698428	33722445	789624	4	254,138,102,78,	0,11945,19109,24118,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	33698261	33722448	chr11:33698261-33722448	0	-	33702717	33722445	789624	5	253,70,138,102,70,	0,4406,11944,19108,24117,
#Partially deleted in new
chr11	33698354	33722467	chr11:33698354-33722467	0	-	33710125	33722445	789624	4	160,438,102,89,	0,11551,19015,24024,
#Partially deleted in new
chr11	33698456	33700397	chr11:33698456-33700397	0	-	33699561	33700397	789624	3	58,80,153,	0,1084,1788,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	33703009	33736491	chr11:33703009-33736491	3	-	33710125	33722445	0	4	7334,102,85,110,	0,14360,19369,33372,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	33708869	33719611	chr11:33708869-33719611	0	-	33708869	33708869	8553170	2	1474,2242,	0,8500,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	33709555	33736408	chr11:33709555-33736408	1	-	33710274	33722445	789624	5	788,122,102,85,27,	0,1828,7814,12823,26826,
#Partially deleted in new
chr11	33709634	33722710	chr11:33709634-33722710	1	-	33710125	33722445	0	3	709,102,332,	0,7735,12744,
#Partially deleted in new
chr11	33709797	33722727	chr11:33709797-33722727	1	-	33710125	33722445	0	4	546,102,85,92,	0,7572,12581,12838,
#Partially deleted in new
chr11	33709825	33722952	chr11:33709825-33722952	1	-	33710125	33722445	0	4	518,102,85,36,	0,7544,12553,13091,
#Partially deleted in new
chr11	33709928	33722726	chr11:33709928-33722726	1	-	33710125	33722445	0	4	415,102,85,156,	0,7441,12450,12642,
#Partially deleted in new
chr11	33709995	33736479	chr11:33709995-33736479	1	-	33710125	33722445	0	5	348,102,85,45,98,	0,7374,12383,21428,26386,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	33710098	33736423	chr11:33710098-33736423	1	-	33710274	33722445	789624	6	245,122,102,85,45,42,	0,1285,7271,12280,21325,26283,
#Partially deleted in new
chr11	33740938	33774347	chr11:33740938-33774347	1	-	33741907	33768869	789624	10	1146,191,116,123,85,46,205,115,164,3607,	0,6191,7838,9600,10584,13516,14832,17548,27912,29802,
#Partially deleted in new
chr11	33740945	33774516	chr11:33740945-33774516	3	-	33741907	33774497	0	11	1139,191,116,123,85,46,205,115,164,90,123,	0,6184,7831,9593,10577,13509,14825,17541,27905,29795,33448,
#Partially deleted in new
chr11	33740955	33774525	chr11:33740955-33774525	0	-	33740955	33740955	8553170	11	1129,191,116,123,85,1390,205,115,164,90,132,	0,6174,7821,9583,10567,12155,14815,17531,27895,29785,33438,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	33740964	33774518	chr11:33740964-33774518	1	-	33747120	33774497	0	10	6356,116,123,85,46,205,115,164,75,125,	0,7812,9574,10558,13490,14806,17522,27886,29776,33429,
#Partially deleted in new
chr11	33741441	33753400	chr11:33741441-33753400	1	-	33741907	33748885	789624	6	643,191,116,123,85,290,	0,5688,7335,9097,10081,11669,
#Partially deleted in new
chr11	33741738	33753399	chr11:33741738-33753399	1	-	33741907	33748885	789624	6	346,191,116,123,85,57,	0,5391,7038,8800,9784,11604,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	33744684	33774504	chr11:33744684-33774504	1	-	33746601	33774497	789624	11	1971,191,116,123,85,46,205,115,164,90,111,	0,2445,4092,5854,6838,9770,11086,13802,24166,26056,29709,
#Partially deleted in new
chr11	33745936	33748812	chr11:33745936-33748812	0	-	33745936	33745936	8553170	3	123,191,36,	0,1193,2840,
#Partially deleted in new
chr11	33746742	33774543	chr11:33746742-33774543	1	-	33747120	33774497	0	10	578,116,123,85,46,205,115,164,90,150,	0,2034,3796,4780,7712,9028,11744,22108,23998,27651,
#Partially deleted in new
chr11	33747241	33774520	chr11:33747241-33774520	0	-	33754454	33774497	789624	9	79,116,123,85,46,115,164,90,127,	0,1535,3297,4281,7213,11245,21609,23499,27152,
#Partially deleted in new
chr11	33755952	33774504	chr11:33755952-33774504	0	-	33763254	33774497	789624	6	23,115,81,164,90,111,	0,2534,7253,12898,14788,18441,
#Partially deleted in new
chr11	33758502	33774314	chr11:33758502-33774314	0	-	33758502	33758502	8553170	5	99,81,164,90,136,	0,4703,10348,12238,15676,
#Partially deleted in new
chr11	33763205	33772003	chr11:33763205-33772003	0	-	33763205	33763205	8553170	5	81,28,164,90,171,	0,4402,5645,7535,8627,
#Deleted in new
chr11	33774698	33775670	chr11:33774698-33775670	3	+	33774698	33774698	789624	3	53,110,223,	0,555,749,
#Deleted in new
chr11	33774704	33775670	chr11:33774704-33775670	0	+	33774704	33774704	8553170	3	47,110,219,	0,549,747,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	33776187	33779495	chr11:33776187-33779495	3	+	33776187	33776187	8553170	2	153,333,	0,2975,
#Deleted in new
chr11	33787053	33787795	chr11:33787053-33787795	7	-	33787053	33787053	16724991	1	742,	0,
#Deleted in new
chr11	33804767	33805641	chr11:33804767-33805641	3	+	33804767	33804767	8553170	3	107,90,350,	0,229,524,
#Deleted in new
chr11	33810144	33811178	chr11:33810144-33811178	3	+	33810144	33810144	8553170	2	87,234,	0,800,
#Partially deleted in new
chr11	33814876	33822095	chr11:33814876-33822095	3	-	33814876	33814876	8553170	3	91,115,102,	0,4913,7117,
#Partially deleted in new
chr11	33858575	33892289	chr11:33858575-33892289	1	-	33859355	33869716	0	6	1000,216,241,278,64,495,	0,6026,10770,11134,23248,33219,
#Partially deleted in new
chr11	33858575	33869816	chr11:33858575-33869816	3	-	33859355	33869386	0	3	1000,216,471,	0,6026,10770,
#Partially deleted in new
chr11	33858575	33869536	chr11:33858575-33869536	0	-	33864802	33869386	0	3	1000,328,191,	0,6026,10770,
#Partially deleted in new
chr11	33858575	33865151	chr11:33858575-33865151	0	-	33858575	33858575	8553170	2	1000,550,	0,6026,
#Partially deleted in new
chr11	33864763	33870312	chr11:33864763-33870312	0	-	33864763	33864763	8553170	3	54,642,173,	0,4582,5376,
#Deleted in new
chr11	33869544	33870529	chr11:33869544-33870529	0	-	33869544	33869544	8553170	3	42,163,185,	0,280,800,
#Partially deleted in new
chr11	33880642	33881792	chr11:33880642-33881792	0	+	33880642	33880642	8553170	1	1150,	0,
#Partially deleted in new
chr11	33880642	33881800	chr11:33880642-33881800	3	+	33880642	33880642	8553170	1	1158,	0,
#Partially deleted in new
chr11	34051682	34101156	chr11:34051682-34101156	3	+	34052420	34099367	0	19	189,216,63,87,239,83,138,53,87,156,109,62,111,150,151,195,101,64,1854,	0,738,20043,20218,24553,24877,27945,31142,31272,34381,34622,37712,38496,38846,40223,44796,45513,46015,47620,
#Partially deleted in new
chr11	34051731	34099054	chr11:34051731-34099054	1	+	34052420	34097781	0	18	140,216,63,87,239,83,138,53,87,156,109,62,111,150,151,195,101,1357,	0,689,19994,20169,24504,24828,27896,31093,31223,34332,34573,37663,38447,38797,40174,44747,45464,45966,
#Deleted in new
chr11	34051731	34052867	chr11:34051731-34052867	0	+	34051731	34051731	8553170	2	140,447,	0,689,
#Partially deleted in new
chr11	34051731	34099332	chr11:34051731-34099332	0	+	34051731	34051731	8553170	6	140,216,44,101,64,30,	0,689,44898,45464,45966,47571,
#Partially deleted in new
chr11	34051750	34076623	chr11:34051750-34076623	0	+	34051750	34051750	8553170	5	121,63,87,239,64,	0,19975,20150,24485,24809,
#Partially deleted in new
chr11	34052054	34076429	chr11:34052054-34076429	0	+	34052420	34076429	789624	5	108,216,63,87,194,	0,366,19671,19846,24181,
#Partially deleted in new
chr11	34052209	34100464	chr11:34052209-34100464	1	+	34052420	34099367	0	18	427,63,87,239,83,138,53,87,156,109,62,111,150,151,195,101,64,1162,	0,19516,19691,24026,24350,27418,30615,30745,33854,34095,37185,37969,38319,39696,44269,44986,45488,47093,
#Partially deleted in new
chr11	34052328	34099058	chr11:34052328-34099058	1	+	34052420	34097781	0	17	308,63,87,239,83,138,53,87,156,109,62,111,150,151,195,101,1361,	0,19397,19572,23907,24231,27299,30496,30626,33735,33976,37066,37850,38200,39577,44150,44867,45369,
#Partially deleted in new
chr11	34052980	34099514	chr11:34052980-34099514	1	+	34071752	34099367	789624	18	205,63,87,239,83,138,53,87,156,109,62,111,150,151,195,101,64,212,	0,18745,18920,23255,23579,26647,29844,29974,33083,33324,36414,37198,37548,38925,43498,44215,44717,46322,
#Partially deleted in new
chr11	34053450	34076415	chr11:34053450-34076415	0	+	34053450	34053450	8553170	4	69,63,87,180,	0,18275,18450,22785,
#Partially deleted in new
chr11	34053521	34071940	chr11:34053521-34071940	0	+	34053521	34053521	8553170	4	150,312,63,40,	0,9530,18204,18379,
#Partially deleted in new
chr11	34055685	34076373	chr11:34055685-34076373	0	+	34055685	34055685	8553170	5	55,86,63,87,138,	0,800,16040,16215,20550,
#Partially deleted in new
chr11	34055737	34076596	chr11:34055737-34076596	0	+	34055737	34055737	8553170	6	68,86,63,87,239,37,	0,748,15988,16163,20498,20822,
#Partially deleted in new
chr11	34090025	34101151	chr11:34090025-34101151	0	+	34090025	34090025	8553170	7	264,150,151,195,101,64,1849,	0,503,1880,6453,7170,7672,9277,
#Partially deleted in new
chr11	34091618	34096625	chr11:34091618-34096625	0	+	34091618	34091618	8553170	2	438,147,	0,4860,
#Deleted in new
chr11	34095818	34099388	chr11:34095818-34099388	0	+	34095818	34095818	8553170	5	33,195,101,64,86,	0,660,1377,1879,3484,
#Deleted in new
chr11	34096159	34097272	chr11:34096159-34097272	0	+	34096159	34096159	8553170	2	514,77,	0,1036,
#Partially deleted in new
chr11	34105601	34146910	chr11:34105601-34146910	3	+	34108225	34146192	789624	29	191,123,92,172,123,62,115,108,134,94,99,137,125,151,97,117,102,75,117,134,49,97,111,173,120,99,74,84,827,	0,2609,3140,6450,8114,10221,12578,12794,16857,18160,18700,21861,25211,25779,26523,27424,28717,28910,29573,31040,31376,33589,33783,34798,35487,36117,36673,37843,40482,
#Partially deleted in new
chr11	34105616	34146574	chr11:34105616-34146574	1	+	34112067	34146192	789624	27	176,172,123,62,115,108,134,94,99,137,125,151,97,117,102,75,117,134,49,97,111,173,120,99,74,84,491,	0,6435,8099,10206,12563,12779,16842,18145,18685,21846,25196,25764,26508,27409,28702,28895,29558,31025,31361,33574,33768,34783,35472,36102,36658,37828,40467,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	34105616	34108323	chr11:34105616-34108323	0	+	34105616	34105616	8553170	3	176,267,113,	0,1436,2594,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	34106028	34108833	chr11:34106028-34108833	0	+	34106028	34106028	8553170	4	46,267,123,92,	0,1024,2182,2713,
#Partially deleted in new
chr11	34106038	34113780	chr11:34106038-34113780	0	+	34108225	34113780	789624	5	109,123,92,172,65,	0,2172,2703,6013,7677,
#Partially deleted in new
chr11	34108208	34146908	chr11:34108208-34146908	1	+	34108225	34146192	789624	8	125,92,172,123,62,115,108,803,	0,533,3843,5507,7614,9971,10187,37897,
#Partially deleted in new
chr11	34113802	34146903	chr11:34113802-34146903	1	+	34113802	34143524	789624	26	36,62,115,108,134,94,99,137,125,151,97,117,102,75,117,134,49,97,111,173,120,99,74,55,28,820,	0,2020,4377,4593,8656,9959,10499,13660,17010,17578,18322,19223,20516,20709,21372,22839,23175,25388,25582,26597,27286,27916,28472,29642,29698,32281,
#Deleted in new
chr11	34138871	34139511	chr11:34138871-34139511	0	+	34138871	34138871	8553170	2	416,127,	0,513,
#Partially deleted in new
chr11	34141986	34146252	chr11:34141986-34146252	0	+	34141986	34141986	8553170	3	362,84,169,	0,1458,4097,
#Deleted in new
chr11	34146719	34147670	chr11:34146719-34147670	0	+	34146719	34146719	8553170	2	292,128,	0,823,
#Partially deleted in new
chr11	34150987	34358008	chr11:34150987-34358008	3	-	34152386	34357583	789624	17	1597,114,69,91,103,106,179,230,136,97,102,90,166,153,214,147,1308,	0,3277,3713,8308,8918,9260,9915,11588,13698,14272,16271,16915,19918,22167,46337,53556,205713,
#Partially deleted in new
chr11	34173173	34242545	chr11:34173173-34242545	0	-	34173173	34173173	8553170	4	134,214,147,71,	0,24151,31370,69301,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	34189173	34189275	chr11:34189173-34189275	3	+	34189173	34189173	8553170	1	102,	0,
#Deleted in new
chr11	34335117	34336003	chr11:34335117-34336003	7	-	34335117	34335117	16724991	1	886,	0,
#Deleted in new
chr11	34404662	34404949	chr11:34404662-34404949	7	-	34404662	34404662	16724991	1	287,	0,
#Partially deleted in new
chr11	34430879	34431649	chr11:34430879-34431649	7	+	34430879	34430879	16724991	2	72,407,	0,363,
#Partially deleted in new
chr11	34438924	34472062	chr11:34438924-34472062	3	+	34439013	34471433	0	13	155,172,111,131,105,126,192,153,139,131,108,84,695,	0,10267,12063,13152,14165,14876,17086,17740,22326,25180,29363,32033,32443,
#Partially deleted in new
chr11	34438933	34472058	chr11:34438933-34472058	1	+	34439013	34471433	8553170	13	146,172,111,131,105,126,192,153,139,131,108,84,691,	0,10258,12054,13143,14156,14867,17077,17731,22317,25171,29354,32024,32434,
#Partially deleted in new
chr11	34449280	34461389	chr11:34449280-34461389	0	+	34449280	34450929	8553170	9	83,180,131,105,126,192,153,72,139,	0,1638,2796,3809,4520,6730,7384,8495,11970,
#Deleted in new
chr11	34453845	34457087	chr11:34453845-34457087	0	+	34453845	34453845	8553170	3	81,192,423,	0,2165,2819,
#Partially deleted in new
chr11	34460732	34464199	chr11:34460732-34464199	0	+	34460732	34460732	8553170	2	657,95,	0,3372,
#Partially deleted in new
chr11	34464110	34468510	chr11:34464110-34468510	0	+	34464110	34464110	8553170	2	125,223,	0,4177,
#Deleted in new
chr11	34470713	34471547	chr11:34470713-34471547	0	+	34470713	34470713	8553170	2	328,180,	0,654,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	34478792	34513800	chr11:34478792-34513800	3	-	34480217	34505749	0	7	1522,196,69,51,234,125,124,	0,1979,3638,11216,14686,26836,34884,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	34478794	34511799	chr11:34478794-34511799	1	-	34480217	34511569	789624	6	1520,196,69,51,125,256,	0,1977,3636,11214,26834,32749,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	34478795	34511799	chr11:34478795-34511799	1	-	34480217	34511569	0	7	1519,196,69,51,234,125,256,	0,1976,3635,11213,14683,26833,32748,
#Partially deleted in new
chr11	34480196	34513805	chr11:34480196-34513805	1	-	34480217	34505749	0	5	118,196,69,125,129,	0,575,2234,25432,33480,
#Partially deleted in new
chr11	34482429	34511828	chr11:34482429-34511828	0	-	34482429	34482429	8553170	4	70,51,125,285,	0,7579,23199,29114,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	34491596	34513765	chr11:34491596-34513765	1	-	34493416	34505749	0	3	2116,125,89,	0,14032,22080,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	34533013	34557924	chr11:34533013-34557924	3	-	34533013	34533013	8553170	3	153,108,128,	0,11747,24783,
#Partially deleted in new
chr11	34570875	34573982	chr11:34570875-34573982	3	+	34570875	34570875	8553170	2	128,436,	0,2671,
#Partially deleted in new
chr11	34621092	34646551	chr11:34621092-34646551	0	+	34621092	34621092	8553170	4	136,158,100,113,	0,20915,21535,25346,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	34621110	34661057	chr11:34621110-34661057	3	+	34642630	34658931	789624	9	118,100,246,63,69,69,63,196,2226,	0,21517,25328,27908,30431,30626,35797,37422,37721,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	34621134	34660519	chr11:34621134-34660519	1	+	34642630	34658931	789624	8	94,100,246,63,69,63,196,1688,	0,21493,25304,27884,30407,35773,37398,37697,
#Partially deleted in new
chr11	34622052	34659168	chr11:34622052-34659168	1	+	34642630	34658931	789624	9	137,100,246,63,69,69,63,196,337,	0,20575,24386,26966,29489,29684,34855,36480,36779,
#Partially deleted in new
chr11	34622202	34659312	chr11:34622202-34659312	1	+	34642630	34658931	789624	9	214,100,246,63,69,69,63,196,481,	0,20425,24236,26816,29339,29534,34705,36330,36629,
#Partially deleted in new
chr11	34624259	34656931	chr11:34624259-34656931	0	+	34642630	34656931	789624	6	58,100,246,63,69,24,	0,18368,22179,24759,27282,32648,
#Partially deleted in new
chr11	34624265	34646771	chr11:34624265-34646771	1	+	34642630	34646722	789624	3	52,100,333,	0,18362,22173,
#Partially deleted in new
chr11	34624275	34651780	chr11:34624275-34651780	0	+	34642630	34651780	789624	6	42,100,246,63,69,44,	0,18352,22163,24743,27266,27461,
#Partially deleted in new
chr11	34632463	34659317	chr11:34632463-34659317	1	+	34632589	34658931	789624	9	189,100,246,63,69,69,63,196,486,	0,10164,13975,16555,19078,19273,24444,26069,26368,
#Deleted in new
chr11	34642176	34646668	chr11:34642176-34646668	0	+	34642176	34642176	8553170	3	172,100,230,	0,451,4262,
#Deleted in new
chr11	34642384	34651610	chr11:34642384-34651610	0	+	34642630	34651610	789624	5	79,100,246,63,69,	0,243,4054,6634,9157,
#Deleted in new
chr11	34642626	34646894	chr11:34642626-34646894	1	+	34642630	34646722	789624	2	101,456,	0,3812,
#Deleted in new
chr11	34709599	34710161	chr11:34709599-34710161	7	+	34709599	34709599	16724991	1	562,	0,
#Partially deleted in new
chr11	34742905	34743199	chr11:34742905-34743199	7	+	34742905	34742905	16724991	1	294,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	34853093	34890741	chr11:34853093-34890741	0	-	34882716	34890569	789624	8	3549,116,117,141,168,136,118,238,	0,7827,22073,29582,30243,35199,35658,37410,
#Partially deleted in new
chr11	34882294	34916499	chr11:34882294-34916499	3	-	34882716	34916284	0	7	522,168,136,118,49,101,272,	0,1042,5998,6457,8209,12715,33933,
#Partially deleted in new
chr11	34882369	34916351	chr11:34882369-34916351	0	-	34882369	34882369	8553170	6	447,168,136,118,49,124,	0,967,5923,6382,8134,33858,
#Partially deleted in new
chr11	34915828	34960511	chr11:34915828-34960511	0	+	34931423	34960511	789624	5	110,81,101,200,92,	0,15575,31677,41555,44591,
#Partially deleted in new
chr11	34916129	34996122	chr11:34916129-34996122	1	+	34916371	34995172	0	11	357,81,101,200,99,175,148,59,159,65,1209,	0,15274,31376,41254,44290,50510,54009,61994,68440,76185,78784,
#Partially deleted in new
chr11	34916571	34995971	chr11:34916571-34995971	3	+	34916655	34995172	0	11	244,81,101,200,99,175,148,59,159,65,1058,	0,14832,30934,40812,43848,50068,53567,61552,67998,75743,78342,
#Partially deleted in new
chr11	34916631	34995275	chr11:34916631-34995275	1	+	34916655	34995172	0	6	184,81,101,159,65,362,	0,14772,30874,67938,75683,78282,
#Partially deleted in new
chr11	34916640	34960504	chr11:34916640-34960504	0	+	34916655	34960504	789624	4	175,101,200,85,	0,30865,40743,43779,
#Deleted in new
chr11	34941836	34941920	chr11:34941836-34941920	3	+	34941836	34941836	5263520	1	84,	0,
#Partially deleted in new
chr11	34977783	34995177	chr11:34977783-34995177	0	+	34977783	34995172	789624	5	27,59,159,65,264,	0,340,6786,14531,17130,
#Partially deleted in new
chr11	34977934	34984881	chr11:34977934-34984881	0	+	34977934	34977934	8553170	2	248,312,	0,6635,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	34984632	35020591	chr11:34984632-35020591	0	+	34984632	34984632	8553170	3	96,65,384,	0,7682,35575,
#Partially deleted in new
chr11	35132654	35138032	chr11:35132654-35138032	3	-	35132654	35132654	789624	3	486,281,335,	0,3691,5043,
#Partially deleted in new
chr11	35136233	35137726	chr11:35136233-35137726	0	-	35136233	35136233	8553170	2	393,29,	0,1464,
#Partially deleted in new
chr11	35138869	35232402	chr11:35138869-35232402	1	+	35139303	35229333	0	9	501,166,134,69,231,63,72,79,3274,	0,37705,41404,47962,50965,75982,80446,82784,90259,
#Partially deleted in new
chr11	35138869	35232402	chr11:35138869-35232402	3	+	35139303	35229333	0	18	501,166,134,69,231,129,126,114,117,129,132,102,90,204,63,72,79,3274,	0,37705,41404,47962,50965,57876,59251,62212,62801,65642,67242,69235,71095,72376,75982,80446,82784,90259,
#Partially deleted in new
chr11	35138881	35177110	chr11:35138881-35177110	1	+	35139303	35176744	789624	2	489,536,	0,37693,
#Partially deleted in new
chr11	35139169	35229468	chr11:35139169-35229468	1	+	35139303	35229333	0	17	201,166,134,69,231,126,114,117,129,132,102,90,204,63,72,79,340,	0,37405,41104,47662,50665,58951,61912,62501,65342,66942,68935,70795,72076,75682,80146,82484,89959,
#Partially deleted in new
chr11	35139170	35209974	chr11:35139170-35209974	0	+	35139170	35139170	8553170	5	200,166,134,70,10,	0,37404,41103,68966,70794,
#Partially deleted in new
chr11	35139181	35230027	chr11:35139181-35230027	0	+	35139303	35186841	789624	8	189,166,69,231,63,72,79,899,	0,37393,47650,50653,75670,80134,82472,89947,
#Partially deleted in new
chr11	35139181	35229460	chr11:35139181-35229460	1	+	35139303	35229333	789624	6	189,166,56,48,79,332,	0,37393,41092,80158,82472,89947,
#Partially deleted in new
chr11	35139187	35230027	chr11:35139187-35230027	1	+	35139303	35229333	0	12	183,166,134,69,231,102,90,204,63,72,79,899,	0,37387,41086,47644,50647,68917,70777,72058,75664,80128,82466,89941,
#Partially deleted in new
chr11	35139261	35208137	chr11:35139261-35208137	0	+	35139303	35208137	789624	7	109,166,134,69,231,132,33,	0,37313,41012,47570,50573,66850,68843,
#Partially deleted in new
chr11	35139285	35229333	chr11:35139285-35229333	1	+	35139303	35229287	0	4	85,166,28,205,	0,37289,82419,89843,
#Partially deleted in new
chr11	35139292	35229666	chr11:35139292-35229666	1	+	35139303	35229333	0	10	78,166,134,69,231,204,63,72,79,538,	0,37282,40981,47539,50542,71953,75559,80023,82361,89836,
#Partially deleted in new
chr11	35139303	35229333	chr11:35139303-35229333	1	+	35139303	35229333	0	8	67,166,134,69,231,72,79,205,	0,37271,40970,47528,50531,80012,82350,89825,
#Partially deleted in new
chr11	35139305	35223320	chr11:35139305-35223320	0	+	35139305	35222378	789624	9	65,166,134,69,231,63,72,79,946,	0,37269,40968,47526,50529,75546,80010,82348,83069,
#Partially deleted in new
chr11	35176574	35214861	chr11:35176574-35214861	0	+	35176574	35214861	789624	6	166,134,69,138,204,10,	0,3699,10257,13260,34671,38277,
#Partially deleted in new
chr11	35176627	35229322	chr11:35176627-35229322	0	+	35176627	35229322	789624	8	113,134,69,138,63,72,79,194,	0,3646,10204,13207,38224,42688,45026,52501,
#Partially deleted in new
chr11	35176640	35209969	chr11:35176640-35209969	0	+	35176640	35209969	789624	6	100,134,69,138,102,5,	0,3633,10191,13194,31464,33324,
#Partially deleted in new
chr11	35176661	35190429	chr11:35176661-35190429	0	+	35176661	35176661	8553170	4	79,134,69,595,	0,3612,10170,13173,
#Partially deleted in new
chr11	35176698	35201767	chr11:35176698-35201767	0	+	35176698	35201767	789624	6	42,134,69,231,114,97,	0,3575,10133,13136,24383,24972,
#Partially deleted in new
chr11	35180278	35211310	chr11:35180278-35211310	0	+	35180278	35211310	789624	5	129,69,231,90,65,	0,6553,9556,29686,30967,
#Partially deleted in new
chr11	35180357	35200636	chr11:35180357-35200636	0	+	35180357	35180357	8553170	5	50,69,231,126,98,	0,6474,9477,17763,20181,
#Partially deleted in new
chr11	35180382	35221673	chr11:35180382-35221673	1	+	35180382	35221673	789624	8	25,33,21,90,204,63,72,20,	0,6449,27803,29582,30863,34469,38933,41271,
#Partially deleted in new
chr11	35186842	35211309	chr11:35186842-35211309	0	+	35186842	35211309	789624	7	58,231,129,132,102,90,64,	0,2992,17669,19269,21262,23122,24403,
#Partially deleted in new
chr11	35186861	35211257	chr11:35186861-35211257	0	+	35186861	35211257	789624	7	39,231,129,126,102,90,12,	0,2973,9884,11259,21243,23103,24384,
#Partially deleted in new
chr11	35189834	35204909	chr11:35189834-35204909	0	+	35189834	35189834	8553170	4	231,114,120,398,	0,11247,11833,14677,
#Partially deleted in new
chr11	35189881	35229164	chr11:35189881-35229164	0	+	35189881	35229164	789624	6	184,126,63,72,79,36,	0,8239,24970,29434,31772,39247,
#Partially deleted in new
chr11	35189890	35229244	chr11:35189890-35229244	0	+	35189890	35229244	789624	7	175,102,90,63,72,79,116,	0,18214,20074,24961,29425,31763,39238,
#Partially deleted in new
chr11	35189899	35211342	chr11:35189899-35211342	0	+	35189899	35211342	789624	5	166,126,102,90,97,	0,8221,18205,20065,21346,
#Partially deleted in new
chr11	35189925	35204811	chr11:35189925-35204811	0	+	35189925	35189925	8553170	2	140,300,	0,14586,
#Partially deleted in new
chr11	35190009	35201753	chr11:35190009-35201753	0	+	35190009	35201753	789624	4	56,99,114,83,	0,8138,11072,11661,
#Deleted in new
chr11	35197161	35198555	chr11:35197161-35198555	0	+	35197161	35197161	8553170	2	632,687,	0,707,
#Partially deleted in new
chr11	35197856	35201731	chr11:35197856-35201731	0	+	35197856	35197856	8553170	3	390,114,64,	0,3225,3811,
#Partially deleted in new
chr11	35201082	35211253	chr11:35201082-35211253	0	+	35201082	35211253	789624	6	113,129,129,102,90,8,	0,3429,5032,7022,8882,10163,
#Deleted in new
chr11	35201143	35206047	chr11:35201143-35206047	0	+	35201143	35201143	8553170	4	52,120,129,263,	0,524,3368,4641,
#Partially deleted in new
chr11	35201620	35221716	chr11:35201620-35221716	0	+	35201620	35201620	8553170	5	167,204,63,72,63,	0,9625,13231,17695,20033,
#Partially deleted in new
chr11	35201678	35211401	chr11:35201678-35211401	0	+	35201678	35211401	789624	5	109,129,102,90,156,	0,2833,6426,8286,9567,
#Deleted in new
chr11	35205714	35208164	chr11:35205714-35208164	0	+	35205714	35205714	8553170	2	529,60,	0,2390,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	35210342	35214985	chr11:35210342-35214985	3	-	35210342	35210342	8553170	2	432,155,	0,4488,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	35212549	35214007	chr11:35212549-35214007	3	+	35212549	35212549	8553170	2	300,404,	0,1054,
#Partially deleted in new
chr11	35214665	35229446	chr11:35214665-35229446	0	+	35214665	35214665	8553170	4	249,72,79,318,	0,4650,6988,14463,
#Partially deleted in new
chr11	35218928	35221731	chr11:35218928-35221731	0	+	35218928	35218928	8553170	2	459,78,	0,2725,
#Partially deleted in new
chr11	35219343	35229789	chr11:35219343-35229789	0	+	35219343	35229333	789624	2	44,661,	0,9785,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	35251204	35419593	chr11:35251204-35419593	3	-	35260893	35418966	789624	11	9761,232,135,195,234,127,169,251,153,140,644,	0,14322,29662,35552,41082,50314,54869,60993,63818,66172,167745,
#Partially deleted in new
chr11	35251241	35301641	chr11:35251241-35301641	0	-	35260893	35301641	789624	7	3567,122,232,135,195,234,123,	0,9602,14285,29625,35515,41045,50277,
#Partially deleted in new
chr11	35254420	35265745	chr11:35254420-35265745	0	-	35254751	35265745	789624	2	388,219,	0,11106,
#Partially deleted in new
chr11	35254695	35286918	chr11:35254695-35286918	0	-	35260893	35286918	789624	4	113,122,232,162,	0,6148,10831,32061,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	35256951	35420058	chr11:35256951-35420058	1	-	35260893	35419940	789624	11	4014,232,135,195,234,127,169,251,153,140,123,	0,8575,23915,29805,35335,44567,49122,55246,58071,60425,162984,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	35256951	35420057	chr11:35256951-35420057	1	-	35260893	35317506	789624	11	4014,232,135,195,234,127,169,251,153,140,150,	0,8575,23915,29805,35335,44567,49122,55246,58071,60425,162956,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	35256951	35307275	chr11:35256951-35307275	0	-	35256951	35256951	8553170	8	4014,232,135,195,234,127,169,113,	0,8575,23915,29805,35335,44567,49122,50211,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	35256951	35419213	chr11:35256951-35419213	1	-	35261704	35418966	789624	12	4014,71,232,135,195,234,127,169,251,153,140,264,	0,4718,8575,23915,29805,35335,44567,49122,55246,58071,60425,161998,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	35256952	35419558	chr11:35256952-35419558	0	-	35261814	35418966	789624	12	4013,193,232,135,195,234,127,169,251,153,140,609,	0,4717,8574,23914,29804,35334,44566,49121,55245,58070,60424,161997,
#Partially deleted in new
chr11	35258969	35419462	chr11:35258969-35419462	1	-	35260893	35418966	789624	10	1996,232,135,195,127,169,251,153,140,513,	0,6557,21897,27787,42549,47104,53228,56053,58407,159980,
#Partially deleted in new
chr11	35258970	35419109	chr11:35258970-35419109	1	-	35260893	35380412	789624	12	1995,232,135,195,234,127,169,251,153,140,161,160,	0,6556,21896,27786,33316,42548,47103,53227,56052,58406,121410,159979,
#Partially deleted in new
chr11	35258971	35419286	chr11:35258971-35419286	1	-	35260893	35317506	789624	12	1994,232,135,195,234,127,169,251,153,140,119,337,	0,6555,21895,27785,33315,42547,47102,53226,56051,58405,63589,159978,
#Partially deleted in new
chr11	35259074	35419558	chr11:35259074-35419558	1	-	35260893	35322773	789624	14	1891,232,135,195,234,127,169,251,153,140,119,545,58,233,	0,6452,21792,27682,33212,42444,46999,53123,55948,58302,63486,63690,159875,160251,
#Partially deleted in new
chr11	35259349	35420063	chr11:35259349-35420063	1	-	35260893	35317506	789624	12	1616,232,135,195,234,127,169,251,153,140,156,156,	0,6177,21517,27407,32937,42169,46724,52848,55673,58027,111591,160558,
#Partially deleted in new
chr11	35259363	35420024	chr11:35259363-35420024	1	-	35260893	35317506	789624	11	1602,232,135,195,234,127,169,251,153,140,105,	0,6163,21503,27393,32923,42155,46710,52834,55659,58013,160556,
#Partially deleted in new
chr11	35259539	35418641	chr11:35259539-35418641	1	-	35260893	35317506	789624	11	1426,232,135,195,234,127,169,251,153,140,162,	0,5987,21327,27217,32747,41979,46534,52658,55483,57837,158940,
#Partially deleted in new
chr11	35259836	35418409	chr11:35259836-35418409	1	-	35260893	35317506	789624	11	1129,232,135,195,234,127,169,251,153,140,61,	0,5690,21030,26920,32450,41682,46237,52361,55186,57540,158512,
#Partially deleted in new
chr11	35260238	35413796	chr11:35260238-35413796	0	-	35260238	35260238	8553170	11	727,232,135,195,234,127,169,251,153,140,109,	0,5288,20628,26518,32048,41280,45835,51959,54784,57138,153449,
#Partially deleted in new
chr11	35260685	35360128	chr11:35260685-35360128	1	-	35260893	35360050	789624	11	280,232,135,195,234,127,169,251,153,140,86,	0,4841,20181,26071,31601,40833,45388,51512,54337,56691,99357,
#Partially deleted in new
chr11	35260800	35264143	chr11:35260800-35264143	0	-	35260800	35260800	8553170	3	165,193,166,	0,869,3177,
#Partially deleted in new
chr11	35260808	35360050	chr11:35260808-35360050	1	-	35261704	35360050	789624	12	157,71,232,135,195,234,127,169,251,153,140,8,	0,861,4718,20058,25948,31478,40710,45265,51389,54214,56568,99234,
#Partially deleted in new
chr11	35260809	35419985	chr11:35260809-35419985	1	-	35260893	35317506	789624	12	156,232,135,195,234,127,169,251,153,140,119,50,	0,4717,20057,25947,31477,40709,45264,51388,54213,56567,61751,159126,
#Partially deleted in new
chr11	35260856	35419355	chr11:35260856-35419355	0	-	35260856	35418966	789624	11	96,232,135,195,234,127,169,251,153,140,406,	0,4670,20010,25900,31430,40662,45217,51341,54166,56520,158093,
#Partially deleted in new
chr11	35261814	35418966	chr11:35261814-35418966	0	-	35261814	35418966	789624	11	71,232,135,195,234,127,169,251,153,140,17,	0,3712,19052,24942,30472,39704,44259,50383,53208,55562,157135,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	35264829	35360088	chr11:35264829-35360088	1	-	35265487	35360050	789624	10	929,135,195,234,127,169,251,153,140,46,	0,16037,21927,27457,36689,41244,47368,50193,52547,95213,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	35264968	35419553	chr11:35264968-35419553	1	-	35265487	35418966	789624	10	790,135,195,234,127,169,251,153,140,604,	0,15898,21788,27318,36550,41105,47229,50054,52408,153981,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	35265033	35420024	chr11:35265033-35420024	1	-	35265487	35419940	789624	10	725,135,195,234,127,169,251,153,140,89,	0,15833,21723,27253,36485,41040,47164,49989,52343,154902,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	35265103	35420024	chr11:35265103-35420024	1	-	35265487	35317506	789624	10	655,135,195,234,127,169,251,153,140,105,	0,15763,21653,27183,36415,40970,47094,49919,52273,154816,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	35265120	35420024	chr11:35265120-35420024	1	-	35265487	35317506	789624	10	638,135,195,234,127,169,251,153,140,117,	0,15746,21636,27166,36398,40953,47077,49902,52256,154787,
#Partially deleted in new
chr11	35265442	35317383	chr11:35265442-35317383	0	-	35265487	35317383	789624	8	316,135,195,127,169,251,153,7,	0,15424,21314,36076,40631,46755,49580,51934,
#Partially deleted in new
chr11	35265486	35419098	chr11:35265486-35419098	1	-	35265487	35418966	789624	9	272,195,234,127,169,251,153,140,149,	0,21270,26800,36032,40587,46711,49536,51890,153463,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	35280368	35419554	chr11:35280368-35419554	1	-	35280862	35418966	789624	9	633,195,234,127,169,251,153,140,605,	0,6388,11918,21150,25705,31829,34654,37008,138581,
#Partially deleted in new
chr11	35281812	35286009	chr11:35281812-35286009	3	+	35281812	35281812	8553170	2	103,673,	0,3524,
#Partially deleted in new
chr11	35286050	35307271	chr11:35286050-35307271	0	-	35286050	35286050	8553170	5	901,234,127,169,109,	0,6236,15468,20023,21112,
#Partially deleted in new
chr11	35286286	35306163	chr11:35286286-35306163	0	-	35286286	35286286	8553170	3	665,127,90,	0,15232,19787,
#Partially deleted in new
chr11	35286815	35419952	chr11:35286815-35419952	0	-	35286815	35418966	789624	9	136,234,127,169,251,153,140,58,45,	0,5471,14703,19258,25382,28207,30561,132134,133092,
#Partially deleted in new
chr11	35286815	35404490	chr11:35286815-35404490	0	-	35286815	35286815	8553170	8	136,127,169,251,153,140,107,172,	0,14703,19258,25382,28207,30561,112759,117503,
#Partially deleted in new
chr11	35286815	35404517	chr11:35286815-35404517	0	-	35286815	35286815	8553170	8	136,234,169,251,153,140,107,199,	0,5471,19258,25382,28207,30561,112759,117503,
#Partially deleted in new
chr11	35286815	35352360	chr11:35286815-35352360	0	-	35286815	35286815	8553170	8	136,234,127,169,251,153,140,122,	0,5471,14703,19258,25382,28207,30561,65423,
#Partially deleted in new
chr11	35286817	35404490	chr11:35286817-35404490	0	-	35286817	35286817	8553170	8	134,234,127,169,251,153,140,172,	0,5469,14701,19256,25380,28205,30559,117501,
#Partially deleted in new
chr11	35286850	35419899	chr11:35286850-35419899	0	-	35286850	35418966	789624	9	101,234,127,169,251,153,140,58,118,	0,5436,14668,19223,25347,28172,30526,132099,132931,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	35291391	35419546	chr11:35291391-35419546	0	-	35291391	35291391	8553170	7	1129,127,169,251,153,140,597,	0,10127,14682,20806,23631,25985,127558,
#Partially deleted in new
chr11	35292207	35360146	chr11:35292207-35360146	0	-	35292207	35292207	8553170	7	313,127,169,251,153,140,99,	0,9311,13866,19990,22815,25169,67840,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	35297744	35307271	chr11:35297744-35307271	0	-	35297744	35297744	8553170	4	1958,127,169,262,	0,3774,8329,9265,
#Partially deleted in new
chr11	35299377	35307276	chr11:35299377-35307276	0	-	35299377	35299377	8553170	4	325,127,169,114,	0,2141,6696,7785,
#Partially deleted in new
chr11	35312138	35317381	chr11:35312138-35317381	0	-	35312138	35312138	8553170	3	310,153,5,	0,2884,5238,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	35314989	35420024	chr11:35314989-35420024	0	-	35314989	35314989	8553170	2	2527,89,	0,104946,
#Partially deleted in new
chr11	35317503	35419955	chr11:35317503-35419955	0	-	35317503	35419940	789624	3	13,119,48,	0,5057,102404,
#Partially deleted in new
chr11	35317503	35419965	chr11:35317503-35419965	0	-	35317503	35317506	8553170	3	13,69,46,	0,74036,102416,
#Deleted in new
chr11	35374264	35374474	chr11:35374264-35374474	7	+	35374264	35374264	16724991	1	210,	0,
#Partially deleted in new
chr11	35380358	35419041	chr11:35380358-35419041	0	-	35380358	35380358	8553170	2	173,92,	0,38591,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	35390680	35392360	chr11:35390680-35392360	0	-	35390680	35390680	8553170	2	928,29,	0,1651,
#Partially deleted in new
chr11	35419056	35421002	chr11:35419056-35421002	3	+	35419056	35419056	8553170	2	51,467,	0,1479,
#Partially deleted in new
chr11	35431822	35526031	chr11:35431822-35526031	3	-	35432355	35525585	789624	11	1070,293,233,67,213,108,218,115,129,177,519,	0,2689,4080,7804,9658,36178,38778,42807,60222,62273,93690,
#Partially deleted in new
chr11	35431830	35526031	chr11:35431830-35526031	1	-	35432355	35525585	789624	9	1062,293,233,67,213,108,129,177,519,	0,2681,4072,7796,9650,36170,60214,62265,93682,
#Partially deleted in new
chr11	35431832	35494274	chr11:35431832-35494274	1	-	35432355	35441603	789624	11	1060,293,233,67,34,177,108,218,115,129,179,	0,2679,4070,7794,9648,9684,36168,38768,42797,60212,62263,
#Partially deleted in new
chr11	35432112	35530300	chr11:35432112-35530300	1	-	35432355	35494225	789624	13	780,293,233,67,213,108,218,115,129,177,107,28,374,	0,2399,3790,7514,9368,35888,38488,42517,59932,61983,81258,96839,97814,
#Partially deleted in new
chr11	35434567	35436225	chr11:35434567-35436225	0	-	35434567	35434567	8553170	2	237,323,	0,1335,
#Partially deleted in new
chr11	35441647	35525603	chr11:35441647-35525603	0	-	35441647	35525585	789624	5	46,108,129,177,91,	0,26353,50397,52448,83865,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	35579429	35585310	chr11:35579429-35585310	3	-	35579429	35579429	8553170	4	128,100,131,178,	0,653,4569,5703,
#Deleted in new
chr11	35618418	35620868	chr11:35618418-35620868	3	+	35618636	35619950	789624	1	2450,	0,
#Deleted in new
chr11	35619687	35620852	chr11:35619687-35620852	0	+	35619687	35619687	8553170	2	374,477,	0,688,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	35662804	35818007	chr11:35662804-35818007	3	+	35663111	35806385	789624	5	976,78,240,20,11650,	0,22454,63119,72621,143553,
#Partially deleted in new
chr11	35724255	35806621	chr11:35724255-35806621	0	+	35724255	35724255	8553170	4	113,240,20,264,	0,1668,11170,82102,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	35824191	35838523	chr11:35824191-35838523	3	+	35824191	35824191	8553170	3	103,526,313,	0,8740,14019,
#Partially deleted in new
chr11	35860248	35861498	chr11:35860248-35861498	7	-	35860248	35860248	16724991	1	1250,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	35894986	35897735	chr11:35894986-35897735	3	+	35894986	35894986	8553170	2	1082,1056,	0,1693,
#Partially deleted in new
chr11	35915050	35918718	chr11:35915050-35918718	3	-	35915050	35915050	8553170	3	299,104,138,	0,2960,3530,
#Deleted in new
chr11	35917666	35918739	chr11:35917666-35918739	1	-	35917666	35917666	8553170	2	448,159,	0,914,
#Partially deleted in new
chr11	35943980	36230267	chr11:35943980-36230267	1	+	35944098	36229397	789624	5	164,126,135,346,1108,	0,137672,154346,283104,285179,
#Partially deleted in new
chr11	35944077	36232136	chr11:35944077-36232136	3	+	35944098	36229397	789624	6	67,147,126,135,346,2977,	0,92025,137575,154249,283007,285082,
#Partially deleted in new
chr11	35944098	36229313	chr11:35944098-36229313	0	+	35944098	35944098	8553170	5	46,101,126,135,154,	0,56987,137554,154228,285061,
#Deleted in new
chr11	35967009	35968676	chr11:35967009-35968676	7	-	35967009	35967009	16724991	1	1667,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	35972427	35989007	chr11:35972427-35989007	3	+	35972427	35972427	8553170	2	347,147,	0,16433,
#Deleted in new
chr11	35997225	35997675	chr11:35997225-35997675	7	-	35997225	35997225	16724991	1	450,	0,
#Deleted in new
chr11	36010097	36010204	chr11:36010097-36010204	3	+	36010097	36010097	5263520	1	107,	0,
#Partially deleted in new
chr11	36109924	36229211	chr11:36109924-36229211	0	+	36109924	36109924	8553170	3	170,346,52,	0,117160,119235,
#Partially deleted in new
chr11	36163298	36227429	chr11:36163298-36227429	0	+	36163298	36163298	8553170	2	292,345,	0,63786,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	36196247	36197901	chr11:36196247-36197901	3	+	36196247	36196247	8553170	1	1654,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	36269283	36273359	chr11:36269283-36273359	0	-	36269283	36269283	8553170	2	2544,194,	0,3882,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	36272291	36289429	chr11:36272291-36289429	3	-	36274631	36289412	0	6	2481,104,35,140,126,68,	0,3845,4797,6185,8420,17070,
#Deleted in new
chr11	36273959	36274683	chr11:36273959-36274683	0	-	36273959	36273959	8553170	3	265,65,44,	0,396,680,
#Partially deleted in new
chr11	36274222	36289449	chr11:36274222-36289449	1	-	36274631	36289412	0	5	550,104,35,140,88,	0,1914,2866,4254,15139,
#Partially deleted in new
chr11	36274324	36289424	chr11:36274324-36289424	1	-	36274635	36289412	789624	5	448,104,140,126,63,	0,1812,4152,6387,15037,
#Partially deleted in new
chr11	36274472	36276416	chr11:36274472-36276416	0	-	36274472	36274472	8553170	2	300,280,	0,1664,
#Partially deleted in new
chr11	36276466	36289426	chr11:36276466-36289426	0	-	36276466	36276466	8553170	4	657,140,126,65,	0,2010,4245,12895,
#Partially deleted in new
chr11	36278200	36289428	chr11:36278200-36289428	0	-	36278200	36278200	8553170	3	416,126,67,	0,2511,11161,
#Partially deleted in new
chr11	36296287	36431893	chr11:36296287-36431893	0	+	36296287	36296287	8553170	4	151,289,81,41,	0,104709,107010,135565,
#Partially deleted in new
chr11	36296287	36463644	chr11:36296287-36463644	3	+	36401121	36462736	789624	9	151,289,81,49,58,92,141,127,1303,	0,104709,107010,122967,135565,141097,150012,154921,166054,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	36300960	36401264	chr11:36300960-36401264	0	+	36401121	36401264	789624	3	110,166,268,	0,92885,100036,
#Partially deleted in new
chr11	36321157	36323440	chr11:36321157-36323440	3	-	36321157	36321157	8553170	2	446,89,	0,2194,
#Partially deleted in new
chr11	36349867	36419258	chr11:36349867-36419258	0	+	36401121	36419258	789624	4	198,289,81,4,	0,51129,53430,69387,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	36362107	36403360	chr11:36362107-36403360	0	+	36401121	36403360	789624	4	74,166,289,63,	0,31738,38889,41190,
#Partially deleted in new
chr11	36376004	36465204	chr11:36376004-36465204	1	+	36401121	36462736	789624	10	154,76,289,81,49,58,92,141,127,2863,	0,624,24992,27293,43250,55848,61380,70295,75204,86337,
#Partially deleted in new
chr11	36376037	36464965	chr11:36376037-36464965	0	+	36376037	36376037	8553170	6	121,49,58,92,127,2624,	0,43217,55815,61347,75171,86304,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	36376201	36401266	chr11:36376201-36401266	0	+	36401121	36401266	789624	4	36,76,166,270,	0,427,17644,24795,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	36376380	36403323	chr11:36376380-36403323	0	+	36401121	36403323	789624	4	324,166,289,26,	0,17465,24616,26917,
#Deleted in new
chr11	36376381	36381695	chr11:36376381-36381695	0	+	36376381	36376381	8553170	4	323,87,69,56,	0,2999,4138,5258,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	36376400	36396196	chr11:36376400-36396196	0	+	36376400	36376400	8553170	3	304,166,83,	0,17445,19713,
#Partially deleted in new
chr11	36376401	36401270	chr11:36376401-36401270	0	+	36401121	36401270	789624	2	303,274,	0,24595,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	36376543	36394434	chr11:36376543-36394434	0	+	36376543	36376543	8553170	3	161,166,39,	0,17302,17852,
#Partially deleted in new
chr11	36377521	36403359	chr11:36377521-36403359	0	+	36401121	36403359	789624	3	203,289,62,	0,23475,25776,
#Partially deleted in new
chr11	36386520	36388250	chr11:36386520-36388250	3	+	36386520	36386520	8553170	2	38,113,	0,1617,
#Partially deleted in new
chr11	36398411	36403375	chr11:36398411-36403375	0	+	36401121	36403375	789624	3	416,289,78,	0,2585,4886,
#Partially deleted in new
chr11	36401064	36462439	chr11:36401064-36462439	1	+	36401121	36462374	789624	7	221,81,49,58,92,141,98,	0,2233,18190,30788,36320,45235,61277,
#Deleted in new
chr11	36425446	36426122	chr11:36425446-36426122	3	-	36425446	36425446	8553170	2	354,124,	0,552,
#Partially deleted in new
chr11	36453949	36462781	chr11:36453949-36462781	0	+	36453949	36453949	8553170	2	157,440,	0,8392,
#Partially deleted in new
chr11	36453958	36462613	chr11:36453958-36462613	0	+	36453958	36453958	8553170	3	63,150,272,	0,710,8383,
#Partially deleted in new
chr11	36455288	36463676	chr11:36455288-36463676	0	+	36455288	36455288	8553170	2	158,1335,	0,7053,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	36487026	36510272	chr11:36487026-36510272	3	-	36489837	36501515	0	7	3624,78,72,159,151,318,225,	0,5524,7949,10081,11463,14193,23021,
#Partially deleted in new
chr11	36489172	36510256	chr11:36489172-36510256	1	-	36489837	36501515	0	8	1478,78,72,159,151,318,93,209,	0,3378,5803,7935,9317,12047,12546,20875,
#Deleted in new
chr11	36510360	36510537	chr11:36510360-36510537	3	+	36510360	36510360	8553170	1	177,	0,
#Partially deleted in new
chr11	36510708	36536012	chr11:36510708-36536012	0	+	36510708	36510708	8553170	3	330,98,54,	0,9423,25250,
#Partially deleted in new
chr11	36568024	36579756	chr11:36568024-36579756	3	+	36573304	36576436	789624	2	98,6466,	0,5266,
#Partially deleted in new
chr11	36575573	36598232	chr11:36575573-36598232	0	-	36575573	36575573	8553170	2	398,131,	0,22528,
#Partially deleted in new
chr11	36591942	36598236	chr11:36591942-36598236	1	-	36592584	36594168	789624	2	2253,135,	0,6159,
#Partially deleted in new
chr11	36591944	36598279	chr11:36591944-36598279	3	-	36592584	36594168	789624	3	2251,389,178,	0,2862,6157,
#Deleted in new
chr11	36593716	36594755	chr11:36593716-36594755	0	-	36593716	36594168	789624	2	479,93,	0,946,
#Partially deleted in new
chr11	36593956	36598236	chr11:36593956-36598236	0	-	36593956	36594168	789624	3	239,195,135,	0,850,4145,
#Partially deleted in new
chr11	36594165	36598236	chr11:36594165-36598236	0	-	36594165	36594168	8553170	3	30,389,135,	0,641,3936,
#Partially deleted in new
chr11	36594492	36659290	chr11:36594492-36659290	3	+	36610103	36659186	789624	6	269,159,155,67,140,272,	0,15588,38791,41558,53523,64526,
#Partially deleted in new
chr11	36594500	36659268	chr11:36594500-36659268	1	+	36610103	36659186	789624	6	92,159,155,67,140,250,	0,15580,38783,41550,53515,64518,
#Partially deleted in new
chr11	36594512	36659272	chr11:36594512-36659272	1	+	36610103	36659186	789624	4	80,159,140,254,	0,15568,53503,64506,
#Partially deleted in new
chr11	36594512	36659062	chr11:36594512-36659062	0	+	36610103	36659062	789624	6	129,159,155,67,140,44,	0,15568,38771,41538,53503,64506,
#Partially deleted in new
chr11	36594515	36659274	chr11:36594515-36659274	1	+	36610103	36659186	789624	4	246,159,140,256,	0,15565,53500,64503,
#Partially deleted in new
chr11	36594530	36648326	chr11:36594530-36648326	0	+	36594530	36594530	8553170	3	111,159,311,	0,15550,53485,
#Partially deleted in new
chr11	36594556	36633396	chr11:36594556-36633396	0	+	36610103	36633396	789624	3	359,159,113,	0,15524,38727,
#Partially deleted in new
chr11	36594570	36648151	chr11:36594570-36648151	0	+	36610103	36648151	789624	3	71,159,136,	0,15510,53445,
#Partially deleted in new
chr11	36594594	36598233	chr11:36594594-36598233	0	-	36594594	36594594	8553170	2	407,132,	0,3507,
#Partially deleted in new
chr11	36594620	36659284	chr11:36594620-36659284	0	+	36610103	36648054	789624	5	141,159,155,140,266,	0,15460,38663,53395,64398,
#Partially deleted in new
chr11	36594740	36598279	chr11:36594740-36598279	0	-	36594740	36594740	8553170	2	455,178,	0,3361,
#Partially deleted in new
chr11	36594771	36659290	chr11:36594771-36659290	1	+	36610103	36659186	789624	6	144,159,155,67,140,272,	0,15309,38512,41279,53244,64247,
#Partially deleted in new
chr11	36594849	36659274	chr11:36594849-36659274	0	+	36610103	36659186	789624	7	66,87,159,155,67,140,256,	0,2794,15231,38434,41201,53166,64169,
#Partially deleted in new
chr11	36594862	36598233	chr11:36594862-36598233	0	-	36594862	36594862	8553170	2	405,132,	0,3239,
#Partially deleted in new
chr11	36696316	36697867	chr11:36696316-36697867	7	+	36696316	36696316	16724991	2	774,109,	0,1442,
#Deleted in new
chr11	37702124	37702220	chr11:37702124-37702220	3	-	37702124	37702124	8553170	1	96,	0,
#Partially deleted in new
chr11	37725665	37726456	chr11:37725665-37726456	7	+	37725665	37725665	16724991	1	791,	0,
#Partially deleted in new
chr11	37938600	37954663	chr11:37938600-37954663	3	+	37938600	37938600	789624	3	103,60,213,	0,12140,15850,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	38013509	38014141	chr11:38013509-38014141	3	-	38013509	38013509	8553170	1	632,	0,
#Partially deleted in new
chr11	38211388	38212799	chr11:38211388-38212799	7	+	38211388	38211388	16724991	2	329,556,	0,855,
#Partially deleted in new
chr11	38618263	38646348	chr11:38618263-38646348	0	-	38618263	38618263	789624	5	49,167,62,125,26,	0,1440,15483,16707,28059,
#Partially deleted in new
chr11	38618328	38646356	chr11:38618328-38646356	3	-	38618328	38618328	789624	5	89,167,62,125,34,	0,1375,15418,16642,27994,
#Partially deleted in new
chr11	38646450	38686323	chr11:38646450-38686323	3	+	38646450	38646450	8553170	7	144,166,224,231,146,80,265,	0,2318,29559,31898,35006,38167,39608,
#Partially deleted in new
chr11	38646475	38674241	chr11:38646475-38674241	1	+	38646475	38646475	8553170	4	119,181,122,159,	0,1948,17386,27607,
#Partially deleted in new
chr11	38648763	38666857	chr11:38648763-38666857	0	+	38648763	38648763	8553170	3	77,122,261,	0,15098,17833,
#Partially deleted in new
chr11	38648857	38655252	chr11:38648857-38655252	1	+	38648857	38648857	789624	3	77,139,293,	0,4123,6102,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	39024630	39161638	chr11:39024630-39161638	3	-	39024630	39024630	8553170	3	2174,95,114,	0,95958,136894,
#Partially deleted in new
chr11	39161452	39161967	chr11:39161452-39161967	7	+	39161452	39161452	16724991	1	515,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	39261106	39261213	chr11:39261106-39261213	3	+	39261106	39261106	8553170	1	107,	0,
#Deleted in new
chr11	39873781	39874388	chr11:39873781-39874388	7	+	39873781	39873781	16724991	1	607,	0,
#Partially deleted in new
chr11	40083709	40084517	chr11:40083709-40084517	7	-	40083709	40083709	16724991	1	808,	0,
#Partially deleted in new
chr11	40107243	40112599	chr11:40107243-40112599	3	-	40107243	40107243	8553170	1	5356,	0,
#Partially deleted in new
chr11	40114202	40294114	chr11:40114202-40294114	1	-	40114369	40116292	0	2	2132,1922,	0,177990,
#Partially deleted in new
chr11	40114204	40319730	chr11:40114204-40319730	1	-	40114369	40116292	0	3	2130,53,103,	0,26596,205423,
#Partially deleted in new
chr11	40114240	40293130	chr11:40114240-40293130	1	-	40114369	40116292	0	3	2094,53,938,	0,26560,177952,
#Partially deleted in new
chr11	40114292	41459585	chr11:40114292-41459585	1	-	40114369	40116292	0	7	2042,53,80,94,137,89,155,	0,26508,127226,205335,533849,819342,1345138,
#Partially deleted in new
chr11	40114292	41459773	chr11:40114292-41459773	3	-	40114369	40116292	0	5	2042,53,94,137,343,	0,26508,205335,533849,1345138,
#Partially deleted in new
chr11	40116169	40241883	chr11:40116169-40241883	0	-	40116169	40116292	789624	3	165,53,365,	0,24631,125349,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	40351563	40351672	chr11:40351563-40351672	3	+	40351563	40351563	8553170	1	109,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	40444370	40513269	chr11:40444370-40513269	4	-	40444370	40444370	16724991	2	3658,160,	0,68739,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	40445303	40447141	chr11:40445303-40447141	7	-	40445303	40445303	16724991	1	1838,	0,
#Partially deleted in new
chr11	40648223	41459636	chr11:40648223-41459636	0	-	40648223	40648223	8553170	4	55,89,212,206,	0,285411,574573,811207,
#Deleted in new
chr11	41122906	41123012	chr11:41122906-41123012	3	-	41122906	41122906	8553170	1	106,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	41394594	41426504	chr11:41394594-41426504	3	+	41394594	41394594	8553170	3	255,69,254,	0,29316,31656,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	41518894	41714448	chr11:41518894-41714448	3	-	41518894	41518894	8553170	7	270,70,227,91,52,105,44,	0,9245,70524,72211,101453,193454,195510,
#Deleted in new
chr11	41538433	41538986	chr11:41538433-41538986	7	+	41538433	41538433	16724991	1	553,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	41586734	41712408	chr11:41586734-41712408	0	-	41586734	41586734	8553170	3	167,227,60,	0,2684,125614,
#Deleted in new
chr11	41660029	41660221	chr11:41660029-41660221	7	+	41660029	41660029	16724991	1	192,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	41714567	41836442	chr11:41714567-41836442	1	+	41714567	41714567	789624	6	36,105,101,127,90,94,	0,20104,106725,111583,120603,121781,
#Partially deleted in new
chr11	41720442	41734754	chr11:41720442-41734754	1	+	41720442	41720442	8553170	2	472,83,	0,14229,
#Deleted in new
chr11	41797542	41797964	chr11:41797542-41797964	7	+	41797542	41797542	16724991	1	422,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	41855919	41861830	chr11:41855919-41861830	3	+	41855919	41855919	8553170	3	138,227,130,	0,408,5781,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	41856345	41875997	chr11:41856345-41875997	0	+	41856345	41856345	8553170	2	209,222,	0,19430,
#Partially deleted in new
chr11	41859842	41862330	chr11:41859842-41862330	1	+	41859842	41859842	8553170	3	63,90,380,	0,1858,2108,
#Deleted in new
chr11	41876633	41877078	chr11:41876633-41877078	3	+	41876633	41876633	8553170	2	47,223,	0,222,
#Partially deleted in new
chr11	41993384	42085458	chr11:41993384-42085458	1	-	41993384	41993384	8553170	4	282,118,114,70,	0,75363,77149,92004,
#Partially deleted in new
chr11	42068574	42163851	chr11:42068574-42163851	3	-	42068574	42068574	8553170	5	291,114,91,85,44,	0,1959,41932,58040,95233,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	42183291	42239819	chr11:42183291-42239819	0	-	42183291	42183291	8553170	4	99,171,67,110,	0,19042,54801,56418,
#Partially deleted in new
chr11	42183296	42239735	chr11:42183296-42239735	3	-	42183296	42183296	8553170	5	94,164,111,67,26,	0,4318,5249,54796,56413,
#Partially deleted in new
chr11	42214794	42253712	chr11:42214794-42253712	1	-	42214794	42214794	8553170	5	192,67,117,71,99,	0,23298,24915,26253,38819,
#Deleted in new
chr11	42939774	42939998	chr11:42939774-42939998	7	+	42939774	42939774	16724991	1	224,	0,
#Partially deleted in new
chr11	43063636	43065932	chr11:43063636-43065932	7	-	43063636	43063636	16724991	2	1219,229,	0,2067,
#Deleted in new
chr11	43065685	43066076	chr11:43065685-43066076	7	-	43065685	43065685	16724991	1	391,	0,
#Partially deleted in new
chr11	43120761	43269393	chr11:43120761-43269393	7	-	43120761	43120761	16724991	3	244,216,129,	0,423,148503,
#Partially deleted in new
chr11	43261503	43269369	chr11:43261503-43269369	4	-	43261503	43261503	16724991	2	1777,105,	0,7761,
#Deleted in new
chr11	43262106	43263427	chr11:43262106-43263427	5	-	43262106	43262106	16724991	1	1321,	0,
#Partially deleted in new
chr11	43311977	43342980	chr11:43311977-43342980	1	+	43318446	43342510	0	15	219,62,162,94,66,152,207,105,90,182,94,57,77,137,553,	0,6443,6662,8843,9433,10007,11452,14529,15811,16734,17987,18530,23300,23880,30450,
#Partially deleted in new
chr11	43311988	43318984	chr11:43311988-43318984	0	+	43311988	43311988	8553170	2	208,345,	0,6651,
#Partially deleted in new
chr11	43311988	43342664	chr11:43311988-43342664	1	+	43312127	43342510	0	14	208,162,94,66,152,207,105,90,182,94,57,77,137,237,	0,6651,8832,9422,9996,11441,14518,15800,16723,17976,18519,23289,23869,30439,
#Partially deleted in new
chr11	43311997	43342981	chr11:43311997-43342981	1	+	43312127	43342455	0	13	199,94,66,152,207,105,90,182,94,57,77,137,549,	0,8823,9413,9987,11432,14509,15791,16714,17967,18510,23280,23860,30435,
#Partially deleted in new
chr11	43312002	43344529	chr11:43312002-43344529	3	+	43312127	43342455	0	14	194,162,94,66,152,207,105,90,182,94,57,77,137,2097,	0,6637,8818,9408,9982,11427,14504,15786,16709,17962,18505,23275,23855,30430,
#Partially deleted in new
chr11	43312095	43336230	chr11:43312095-43336230	1	+	43312127	43336035	789624	13	101,162,94,66,152,207,105,90,182,94,57,77,373,	0,6544,8725,9315,9889,11334,14411,15693,16616,17869,18412,23182,23762,
#Partially deleted in new
chr11	43322043	43335940	chr11:43322043-43335940	0	+	43322043	43335940	789624	8	93,207,90,182,94,57,77,83,	0,1386,5745,6668,7921,8464,13234,13814,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	43328747	43359296	chr11:43328747-43359296	3	-	43328747	43328747	8553170	4	591,46,74,76,	0,3293,6511,30473,
#Partially deleted in new
chr11	43329985	43336064	chr11:43329985-43336064	0	+	43329985	43329985	8553170	3	73,57,207,	0,522,5872,
#Partially deleted in new
chr11	43330232	43336221	chr11:43330232-43336221	0	+	43330232	43330232	8553170	3	332,77,364,	0,5045,5625,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	43331260	43331356	chr11:43331260-43331356	3	+	43331260	43331260	8553170	1	96,	0,
#Partially deleted in new
chr11	43335278	43339373	chr11:43335278-43339373	0	+	43335278	43335278	8553170	3	76,137,133,	0,579,3962,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr11	43358931	43446719	chr11:43358931-43446719	1	+	43358954	43445965	789624	20	182,90,170,112,132,110,145,140,161,113,147,116,166,78,225,187,171,260,154,789,	0,20301,30720,32533,32889,37777,38415,39042,40956,42514,45066,46582,46854,48206,48421,55658,77232,84393,85124,86999,
#Partially deleted in new
chr11	43358940	43494933	chr11:43358940-43494933	3	+	43358954	43493904	789624	24	173,90,170,112,132,110,145,140,161,113,147,116,166,78,225,187,260,154,121,160,84,120,144,1161,	0,20292,30711,32524,32880,37768,38406,39033,40947,42505,45057,46573,46845,48197,48412,55649,84384,85115,89061,91141,92241,131298,133079,134832,
#Partially deleted in new
chr11	43358953	43391870	chr11:43358953-43391870	0	+	43358954	43370084	789624	6	160,307,90,170,112,50,	0,11125,20279,30698,32511,32867,
#Partially deleted in new
chr11	43378881	43385671	chr11:43378881-43385671	3	-	43378881	43378881	8553170	2	387,57,	0,6733,
#Partially deleted in new
chr11	43379257	43391788	chr11:43379257-43391788	0	+	43379257	43379257	8553170	3	65,170,324,	0,10394,12207,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	43390282	43395495	chr11:43390282-43395495	3	+	43390282	43390282	8553170	2	51,132,	0,5081,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr11	43396135	43446544	chr11:43396135-43446544	0	+	43396135	43396135	8553170	15	683,145,140,161,113,147,116,166,78,225,187,171,260,154,614,	0,1211,1838,3752,5310,7862,9378,9650,11002,11217,18454,40028,47189,47920,49795,
#Deleted in new
chr11	43396996	43398058	chr11:43396996-43398058	0	+	43396996	43396996	8553170	2	495,85,	0,977,
#Partially deleted in new
chr11	43398032	43401622	chr11:43398032-43401622	0	+	43398032	43401622	789624	3	81,161,177,	0,1855,3413,
#Deleted in new
chr11	43404051	43405876	chr11:43404051-43405876	0	+	43404051	43404051	8553170	2	93,363,	0,1462,
#Deleted in new
chr11	43435131	43435397	chr11:43435131-43435397	3	-	43435131	43435131	8553170	1	266,	0,
#Partially deleted in new
chr11	43436221	43444505	chr11:43436221-43444505	0	+	43436221	43436221	8553170	3	113,260,450,	0,7103,7834,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	43447583	43492164	chr11:43447583-43492164	0	+	43447583	43447583	8553170	5	539,160,84,120,145,	0,2498,3598,42655,44436,
#Partially deleted in new
chr11	43448602	43494927	chr11:43448602-43494927	0	+	43448602	43448602	8553170	5	1639,84,120,144,1155,	0,2579,41636,43417,45170,
#Partially deleted in new
chr11	43450137	43468363	chr11:43450137-43468363	0	+	43450137	43450137	8553170	3	104,84,208,	0,1044,18018,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	43451179	43493961	chr11:43451179-43493961	0	+	43451179	43493904	789624	5	86,36,120,144,189,	0,35236,39059,40840,42593,
#Partially deleted in new
chr11	43466391	43466871	chr11:43466391-43466871	7	+	43466391	43466391	16724991	1	480,	0,
#Deleted in new
chr11	43489796	43494083	chr11:43489796-43494083	0	+	43489796	43489796	8553170	3	562,144,311,	0,2223,3976,
#Deleted in new
chr11	43490717	43494933	chr11:43490717-43494933	0	+	43490717	43490717	8553170	2	1446,1161,	0,3055,
#Deleted in new
chr11	43522035	43523264	chr11:43522035-43523264	7	+	43522035	43522035	16724991	1	1229,	0,
#Partially deleted in new
chr11	43556435	43673393	chr11:43556435-43673393	3	+	43556435	43556435	8553170	5	26,62,115,83,403,	0,464,28124,84516,116555,
#Deleted in new
chr11	43559655	43559753	chr11:43559655-43559753	3	+	43559655	43559655	5263520	1	98,	0,
#Deleted in new
chr11	43569305	43570395	chr11:43569305-43570395	3	+	43569305	43569305	789624	2	268,629,	0,461,
#Partially deleted in new
chr11	43576587	43673243	chr11:43576587-43673243	0	+	43576587	43576587	8553170	4	24,115,83,253,	0,7972,64364,96403,
#Partially deleted in new
chr11	43578888	43840030	chr11:43578888-43840030	3	+	43578888	43578888	8553170	11	83,115,83,47,76,108,65,45,35,82,32,	0,5671,62063,172022,175157,219431,236548,237458,252087,259428,261110,
#Deleted in new
chr11	43579194	43584601	chr11:43579194-43584601	0	+	43579194	43579194	8553170	2	322,42,	0,5365,
#Deleted in new
chr11	43581393	43581483	chr11:43581393-43581483	3	+	43581393	43581393	5263520	1	90,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	43644237	43646371	chr11:43644237-43646371	0	+	43644237	43644237	8553170	1	2134,	0,
#Partially deleted in new
chr11	43644265	43831005	chr11:43644265-43831005	0	+	43644265	43644265	8553170	10	190,121,22,44,47,76,108,65,45,30,	0,943,28725,28830,106645,109780,154054,171171,172081,186710,
#Partially deleted in new
chr11	43670285	43673282	chr11:43670285-43673282	1	+	43670285	43670285	8553170	2	189,292,	0,2705,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	43680557	43856610	chr11:43680557-43856610	3	+	43680827	43855248	789624	11	430,47,76,108,65,45,35,82,66,150,1467,	0,70353,73488,117762,134879,135789,150418,157759,159441,174157,174586,
#Partially deleted in new
chr11	43680679	43838374	chr11:43680679-43838374	0	+	43680681	43754049	789624	8	125,47,76,108,65,45,35,58,	0,70231,73366,117640,134757,135667,150296,157637,
#Partially deleted in new
chr11	43680708	43838395	chr11:43680708-43838395	0	+	43680827	43838395	789624	6	279,108,65,45,35,79,	0,117611,134728,135638,150267,157608,
#Partially deleted in new
chr11	43680777	43855163	chr11:43680777-43855163	0	+	43680827	43840033	789624	6	210,35,82,66,150,20,	0,150198,157539,159221,173937,174366,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	43680780	43755536	chr11:43680780-43755536	1	+	43680827	43754886	789624	4	207,47,76,664,	0,70130,73265,74092,
#Partially deleted in new
chr11	43680794	43754149	chr11:43680794-43754149	0	+	43680827	43681163	789624	3	389,47,104,	0,70116,73251,
#Partially deleted in new
chr11	43680794	43855250	chr11:43680794-43855250	1	+	43680827	43855248	789624	10	193,47,76,65,45,35,82,66,150,107,	0,70116,73251,134642,135552,150181,157522,159204,173920,174349,
#Partially deleted in new
chr11	43681282	43840011	chr11:43681282-43840011	0	+	43681293	43840011	789624	9	75,47,76,108,65,45,35,82,13,	0,69628,72763,117037,134154,135064,149693,157034,158716,
#Partially deleted in new
chr11	43718675	43719146	chr11:43718675-43719146	7	+	43718675	43718675	16724991	1	471,	0,
#Partially deleted in new
chr11	43718675	43719143	chr11:43718675-43719143	7	+	43718675	43718675	16724991	1	468,	0,
#Partially deleted in new
chr11	43724038	43840033	chr11:43724038-43840033	0	+	43724038	43724038	8553170	9	78,47,76,108,65,45,35,82,35,	0,26872,30007,74281,91398,92308,106937,114278,115960,
#Deleted in new
chr11	43733758	43734564	chr11:43733758-43734564	7	+	43733758	43733758	16724991	1	806,	0,
#Deleted in new
chr11	43733760	43734564	chr11:43733760-43734564	7	+	43733760	43733760	16724991	1	804,	0,
#Partially deleted in new
chr11	43754043	43806461	chr11:43754043-43806461	0	+	43754043	43754043	8553170	3	78,108,217,	0,44276,52201,
#Partially deleted in new
chr11	43829708	43833917	chr11:43829708-43833917	1	-	43829708	43829708	8553170	2	1882,308,	0,3901,
#Partially deleted in new
chr11	43830062	43856404	chr11:43830062-43856404	0	+	43830062	43830062	8553170	5	948,82,66,150,1261,	0,8254,9936,24652,25081,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	43833054	43833942	chr11:43833054-43833942	0	-	43833054	43833054	8553170	2	371,333,	0,555,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	43833171	43880726	chr11:43833171-43880726	3	-	43833171	43833171	8553170	4	254,92,94,153,	0,15253,44811,47402,
#Partially deleted in new
chr11	43834073	43855305	chr11:43834073-43855305	0	+	43834073	43834073	8553170	5	51,82,66,150,162,	0,4243,5925,20641,21070,
#Partially deleted in new
chr11	43837948	43854781	chr11:43837948-43854781	0	+	43837948	43837948	8553170	3	450,66,67,	0,2050,16766,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	43852046	43856617	chr11:43852046-43856617	0	+	43852046	43852046	8553170	2	2818,1474,	0,3097,
#Deleted in new
chr11	43855912	43856404	chr11:43855912-43856404	3	-	43855912	43855912	8553170	2	238,51,	0,441,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	43874558	43878073	chr11:43874558-43878073	0	-	43874558	43874558	8553170	2	371,91,	0,3424,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	43880810	43920010	chr11:43880810-43920010	0	+	43882652	43897340	789624	10	369,149,104,35,48,104,160,210,99,93,	0,1772,2274,3172,5795,8914,16384,20705,38227,39107,
#Deleted in new
chr11	43880830	43882802	chr11:43880830-43882802	0	+	43880830	43880830	8553170	2	349,220,	0,1752,
#Partially deleted in new
chr11	43880838	43920212	chr11:43880838-43920212	3	+	43882652	43920010	0	10	341,149,104,35,48,104,89,210,99,295,	0,1744,2246,3144,5767,8886,11202,20677,38199,39079,
#Partially deleted in new
chr11	43880849	43901544	chr11:43880849-43901544	0	+	43882652	43886623	789624	6	330,149,104,48,104,29,	0,1733,2235,5756,8875,20666,
#Deleted in new
chr11	43880854	43883185	chr11:43880854-43883185	0	+	43882652	43883185	789624	3	592,149,101,	0,1728,2230,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	43880873	43920266	chr11:43880873-43920266	0	+	43882652	43897340	0	10	306,149,104,35,45,104,160,210,95,349,	0,1709,2211,3109,5735,8851,16321,20642,38168,39044,
#Partially deleted in new
chr11	43882576	43919042	chr11:43882576-43919042	0	+	43882652	43919042	789624	8	155,104,35,45,104,89,210,5,	0,508,1406,4032,7148,9464,18939,36461,
#Partially deleted in new
chr11	43882580	43897700	chr11:43882580-43897700	0	+	43882580	43882580	8553170	6	151,104,35,48,104,75,	0,504,1402,4025,7144,15045,
#Partially deleted in new
chr11	43883081	43901714	chr11:43883081-43901714	0	+	43883081	43883081	8553170	6	107,35,48,104,89,199,	0,901,3524,6643,8959,18434,
#Partially deleted in new
chr11	43883082	43920173	chr11:43883082-43920173	0	+	43883082	43883082	8553170	6	106,35,48,104,99,256,	0,900,3523,6642,35955,36835,
#Partially deleted in new
chr11	43889761	43920266	chr11:43889761-43920266	0	+	43889761	43920010	789624	4	67,210,99,349,	0,11754,29276,30156,
#Deleted in new
chr11	43897455	43899636	chr11:43897455-43899636	7	+	43897455	43897455	16724991	1	2181,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	43909291	43920926	chr11:43909291-43920926	3	-	43909291	43909291	789624	6	1222,222,253,77,79,53,	0,2971,7377,10294,11094,11582,
#Partially deleted in new
chr11	43912261	43920944	chr11:43912261-43920944	0	-	43912261	43912261	8553170	4	223,77,79,71,	0,7324,8124,8612,
#Partially deleted in new
chr11	43912315	43920859	chr11:43912315-43920859	0	-	43912315	43912315	8553170	4	169,77,79,217,	0,7270,8070,8327,
#Partially deleted in new
chr11	43912446	43920894	chr11:43912446-43920894	1	-	43912446	43912446	8553170	2	38,509,	0,7939,
#Partially deleted in new
chr11	43918803	43920266	chr11:43918803-43920266	0	+	43918803	43918803	8553170	2	333,349,	0,1114,
#Partially deleted in new
chr11	43921058	43933410	chr11:43921058-43933410	0	+	43921058	43921058	8553170	4	113,63,56,321,	0,1154,3971,12031,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	43921075	44001157	chr11:43921075-44001157	3	+	43921075	43921075	8553170	7	96,57,85,223,41,182,59,	0,12014,50367,52782,73938,74234,80023,
#Partially deleted in new
chr11	43925341	43943273	chr11:43925341-43943273	1	+	43925341	43925341	8553170	4	131,115,54,1008,	0,1091,7751,16924,
#Deleted in new
chr11	43942504	43944338	chr11:43942504-43944338	1	+	43942555	43943809	789624	1	1834,	0,
#Deleted in new
chr11	43942589	43943883	chr11:43942589-43943883	3	+	43942904	43943273	789624	1	1294,	0,
#Partially deleted in new
chr11	44047980	44059977	chr11:44047980-44059977	3	+	44048036	44059920	789624	14	560,60,71,70,67,98,78,101,90,46,142,143,154,140,	0,2081,2571,3354,3672,4681,5010,5425,7221,8059,8204,10336,10565,11857,
#Partially deleted in new
chr11	44048014	44059950	chr11:44048014-44059950	0	+	44048036	44050038	789624	14	526,107,71,70,67,98,78,101,90,46,142,143,154,113,	0,2000,2537,3320,3638,4647,4976,5391,7187,8025,8170,10302,10531,11823,
#Partially deleted in new
chr11	44065924	44077699	chr11:44065924-44077699	0	+	44065924	44065924	8553170	7	88,151,60,71,70,67,377,	0,1703,5331,7522,8687,9601,11398,
#Partially deleted in new
chr11	44066178	44073517	chr11:44066178-44073517	0	+	44067627	44073517	789624	4	144,288,60,71,	0,1449,5077,7268,
#Partially deleted in new
chr11	44066267	44084214	chr11:44066267-44084214	3	+	44067627	44083792	789624	15	434,288,60,71,70,67,98,78,101,90,46,142,143,154,520,	0,1360,4988,7179,8344,9258,11011,11577,12416,13263,14752,14911,16901,17156,17427,
#Partially deleted in new
chr11	44066523	44075856	chr11:44066523-44075856	0	+	44066523	44066523	8553170	6	178,147,60,174,70,331,	0,1104,4732,6820,8088,9002,
#Partially deleted in new
chr11	44066535	44077445	chr11:44066535-44077445	0	+	44066535	44066535	8553170	7	166,288,60,89,70,67,167,	0,1092,4720,6911,8076,8990,10743,
#Deleted in new
chr11	44067128	44067859	chr11:44067128-44067859	0	+	44067627	44067859	789624	2	168,232,	0,499,
#Partially deleted in new
chr11	44074629	44079607	chr11:44074629-44079607	0	+	44074629	44074629	8553170	5	52,67,98,940,77,	0,896,2649,3215,4901,
#Partially deleted in new
chr11	44075530	44084222	chr11:44075530-44084222	0	+	44075530	44075530	8553170	7	62,2298,46,142,143,154,528,	0,1792,5489,5648,7638,7893,8164,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	44079337	44083208	chr11:44079337-44083208	0	+	44079337	44079337	8553170	5	283,46,142,128,40,	0,1682,1841,2727,3831,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	44079337	44082120	chr11:44079337-44082120	0	+	44079337	44079337	8553170	4	283,46,142,56,	0,1682,1841,2727,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	44079528	44082181	chr11:44079528-44082181	0	+	44079528	44079528	8553170	4	92,46,142,117,	0,1491,1650,2536,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	44080509	44083270	chr11:44080509-44083270	0	+	44080509	44080509	8553170	2	811,102,	0,2659,
#Partially deleted in new
chr11	44081017	44083893	chr11:44081017-44083893	0	+	44081017	44081017	8553170	4	48,142,143,199,	0,161,2151,2677,
#Partially deleted in new
chr11	44095548	44244932	chr11:44095548-44244932	3	+	44107712	44244287	789624	14	304,566,90,117,196,140,94,132,190,167,144,129,83,784,	0,12134,13645,18636,29240,31267,34496,76062,102280,111244,136804,138566,140744,148600,
#Partially deleted in new
chr11	44095672	44107859	chr11:44095672-44107859	0	+	44107712	44107859	789624	4	180,56,167,177,	0,8017,8944,12010,
#Partially deleted in new
chr11	44095678	44108049	chr11:44095678-44108049	0	+	44107712	44108049	789624	3	174,39,367,	0,8028,12004,
#Partially deleted in new
chr11	44095716	44244931	chr11:44095716-44244931	1	+	44107712	44244287	789624	15	136,566,90,117,196,140,94,93,69,190,167,144,129,83,783,	0,11966,13477,18468,29072,31099,34328,48530,75957,102112,111076,136636,138398,140576,148432,
#Partially deleted in new
chr11	44096196	44245429	chr11:44096196-44245429	1	+	44096252	44244287	789624	14	125,566,90,117,196,140,94,132,190,167,144,129,83,1281,	0,11486,12997,17988,28592,30619,33848,75414,101632,110596,136156,137918,140096,147952,
#Partially deleted in new
chr11	44096222	44245425	chr11:44096222-44245425	1	+	44107712	44244287	789624	14	99,566,90,117,196,140,94,132,190,167,144,129,83,1277,	0,11460,12971,17962,28566,30593,33822,75388,101606,110570,136130,137892,140070,147926,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	44108014	44116839	chr11:44108014-44116839	0	+	44108014	44108014	8553170	4	234,90,117,939,	0,1179,6170,7886,
#Partially deleted in new
chr11	44124868	44232450	chr11:44124868-44232450	0	+	44124868	44124868	8553170	6	116,140,94,132,167,98,	0,1947,5176,46742,81924,107484,
#Partially deleted in new
chr11	44126902	44171911	chr11:44126902-44171911	0	+	44126902	44126902	8553170	3	53,94,301,	0,3142,44708,
#Partially deleted in new
chr11	44130042	44198120	chr11:44130042-44198120	0	+	44130042	44130042	8553170	3	96,132,292,	0,41568,67786,
#Partially deleted in new
chr11	44206864	44244301	chr11:44206864-44244301	0	+	44206864	44206864	8553170	4	95,144,129,153,	0,25488,27250,37284,
#Partially deleted in new
chr11	44260439	44310166	chr11:44260439-44310166	3	-	44264853	44310062	0	4	4744,129,311,570,	0,7054,14908,49157,
#Partially deleted in new
chr11	44468463	44470429	chr11:44468463-44470429	3	+	44468463	44468463	8553170	3	58,132,330,	0,1019,1636,
#Deleted in new
chr11	44539777	44540693	chr11:44539777-44540693	7	-	44539777	44539777	16724991	2	332,460,	0,456,
#Partially deleted in new
chr11	44564426	44615295	chr11:44564426-44615295	0	+	44564481	44615295	789624	7	76,82,83,73,125,75,24,	0,23048,30216,35731,40631,40928,50845,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	44565590	44620363	chr11:44565590-44620363	3	+	44594662	44619126	789624	10	146,82,83,73,125,75,102,204,84,1315,	0,21884,29052,34567,39467,39764,49681,52571,53049,53458,
#Partially deleted in new
chr11	44565600	44619126	chr11:44565600-44619126	1	+	44594662	44619126	789624	9	136,82,83,73,125,102,204,84,78,	0,21874,29042,34557,39457,49671,52561,53039,53448,
#Partially deleted in new
chr11	44565640	44605417	chr11:44565640-44605417	0	+	44594662	44605417	789624	7	96,58,82,83,73,125,63,	0,632,21834,29002,34517,39417,39714,
#Partially deleted in new
chr11	44565641	44619334	chr11:44565641-44619334	0	+	44565641	44565641	8553170	5	95,29,88,84,286,	0,21833,52636,52998,53407,
#Partially deleted in new
chr11	44565662	44600209	chr11:44565662-44600209	0	+	44594662	44600209	789624	5	74,82,177,83,52,	0,21812,22047,28980,34495,
#Partially deleted in new
chr11	44565666	44619383	chr11:44565666-44619383	0	+	44565666	44565666	8553170	9	70,82,83,73,372,102,204,84,335,	0,21808,28976,34491,39391,49605,52495,52973,53382,
#Partially deleted in new
chr11	44565679	44605438	chr11:44565679-44605438	0	+	44585202	44605438	789624	7	57,150,82,83,73,125,84,	0,19463,21795,28963,34478,39378,39675,
#Partially deleted in new
chr11	44565722	44605125	chr11:44565722-44605125	0	+	44594662	44605125	789624	5	278,82,83,73,68,	0,21752,28920,34435,39335,
#Partially deleted in new
chr11	44573077	44605407	chr11:44573077-44605407	0	+	44594662	44605407	789624	6	157,82,83,73,125,53,	0,14397,21565,27080,31980,32277,
#Partially deleted in new
chr11	44587231	44594996	chr11:44587231-44594996	0	+	44587231	44587231	8553170	2	325,354,	0,7411,
#Partially deleted in new
chr11	44596855	44618253	chr11:44596855-44618253	0	+	44596963	44618253	789624	6	114,73,125,75,102,92,	0,3302,8202,8499,18416,21306,
#Partially deleted in new
chr11	44604427	44619275	chr11:44604427-44619275	0	+	44604427	44604427	8553170	7	74,125,75,102,204,84,227,	0,630,927,10844,13734,14212,14621,
#Deleted in new
chr11	44604507	44605337	chr11:44604507-44605337	3	-	44604507	44604507	8553170	2	223,320,	0,510,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	44606169	44608101	chr11:44606169-44608101	3	-	44606169	44606169	8553170	4	291,98,82,96,	0,501,683,1836,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	44618269	44619709	chr11:44618269-44619709	0	+	44618269	44619126	789624	2	96,661,	0,779,
#Deleted in new
chr11	44629356	44629674	chr11:44629356-44629674	7	+	44629356	44629356	16724991	1	318,	0,
#Deleted in new
chr11	44656770	44656920	chr11:44656770-44656920	7	+	44656770	44656770	16724991	1	150,	0,
#Deleted in new
chr11	44694862	44696301	chr11:44694862-44696301	3	-	44694862	44694862	8553170	2	708,81,	0,1358,
#Partially deleted in new
chr11	44719391	44736692	chr11:44719391-44736692	3	-	44719391	44719391	8553170	3	225,115,288,	0,16783,17013,
#Partially deleted in new
chr11	44726464	44919318	chr11:44726464-44919318	0	+	44906416	44919318	789624	7	49,87,142,73,195,75,105,	0,37961,133863,179942,183240,191507,192749,
#Partially deleted in new
chr11	44726810	44909880	chr11:44726810-44909880	0	+	44906416	44909880	789624	5	71,87,142,73,176,	0,37615,133517,179596,182894,
#Partially deleted in new
chr11	44727102	44919995	chr11:44727102-44919995	0	+	44906416	44919995	789624	7	185,87,142,73,75,99,179,	0,37323,133225,179304,190869,192111,192714,
#Partially deleted in new
chr11	44727111	44931332	chr11:44727111-44931332	3	+	44906416	44929178	789624	10	176,87,142,73,195,75,99,183,84,2202,	0,37314,133216,179295,182593,190860,192102,192705,199562,202019,
#Partially deleted in new
chr11	44727173	44919321	chr11:44727173-44919321	0	+	44897808	44919321	789624	8	114,87,142,77,73,195,75,108,	0,37252,133154,170578,179233,182531,190798,192040,
#Partially deleted in new
chr11	44764425	44932421	chr11:44764425-44932421	1	+	44906416	44929178	789624	9	87,142,73,195,75,99,183,84,3291,	0,95902,141981,145279,153546,154788,155391,162248,164705,
#Partially deleted in new
chr11	44859602	44909839	chr11:44859602-44909839	0	+	44897808	44909839	789624	5	138,142,77,73,135,	0,725,38149,46804,50102,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	44885902	44951289	chr11:44885902-44951289	0	-	44903393	44938335	789624	9	662,99,304,111,97,49,59,160,413,	0,15317,17453,17877,50900,51401,51652,52304,64974,
#Partially deleted in new
chr11	44906406	44931336	chr11:44906406-44931336	0	+	44906406	44930966	789624	7	73,195,75,99,183,84,475,	0,3298,11565,12807,13410,20267,24455,
#Partially deleted in new
chr11	44909522	44919974	chr11:44909522-44919974	0	+	44909522	44909522	8553170	4	377,75,99,158,	0,8449,9691,10294,
#Partially deleted in new
chr11	44917581	44929280	chr11:44917581-44929280	0	+	44917581	44917581	8553170	5	465,99,183,84,150,	0,1632,2235,9092,11549,
#Partially deleted in new
chr11	44919665	44929456	chr11:44919665-44929456	0	+	44919665	44919665	8553170	4	334,83,84,326,	0,6051,7008,9465,
#Partially deleted in new
chr11	44919673	44929420	chr11:44919673-44929420	0	+	44919673	44919673	8553170	3	326,84,290,	0,7000,9457,
#Partially deleted in new
chr11	44926366	44929556	chr11:44926366-44929556	0	+	44926366	44926366	8553170	2	391,426,	0,2764,
#Partially deleted in new
chr11	44932347	44951306	chr11:44932347-44951306	1	-	44934883	44938335	789624	8	2670,102,97,49,59,160,116,430,	0,3213,4455,4956,5207,5859,6818,18529,
#Partially deleted in new
chr11	44932347	44950845	chr11:44932347-44950845	1	-	44934883	44938335	789624	8	2670,102,97,49,59,160,75,169,	0,3213,4455,4956,5207,5859,8655,18329,
#Partially deleted in new
chr11	44932347	44951306	chr11:44932347-44951306	3	-	44934883	44938335	789624	7	2670,102,97,49,59,160,430,	0,3213,4455,4956,5207,5859,18529,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	44932355	44950160	chr11:44932355-44950160	1	-	44934883	44938335	789624	10	2662,102,97,49,59,160,77,234,75,188,	0,3205,4447,4948,5199,5851,6758,8158,8647,17617,
#Partially deleted in new
chr11	44933035	44950874	chr11:44933035-44950874	1	-	44934883	44938335	789624	7	1982,102,97,49,59,160,198,	0,2525,3767,4268,4519,5171,17641,
#Partially deleted in new
chr11	44933482	44950778	chr11:44933482-44950778	0	-	44936882	44938335	789624	6	1535,102,97,49,160,102,	0,2078,3320,3821,4724,17194,
#Deleted in new
chr11	44934947	44936056	chr11:44934947-44936056	0	-	44934947	44934947	8553170	2	70,496,	0,613,
#Partially deleted in new
chr11	44934979	44950752	chr11:44934979-44950752	0	-	44934979	44938335	789624	8	38,102,97,49,59,160,77,76,	0,581,1823,2324,2575,3227,4134,15697,
#Partially deleted in new
chr11	44935567	44950874	chr11:44935567-44950874	0	-	44935567	44938335	789624	4	95,49,160,198,	0,1736,2639,15109,
#Partially deleted in new
chr11	44935577	44950833	chr11:44935577-44950833	0	-	44935577	44935577	8553170	6	85,20,49,59,160,157,	0,1302,1726,1977,2629,15099,
#Partially deleted in new
chr11	44935619	44950845	chr11:44935619-44950845	0	-	44935619	44935619	8553170	7	43,131,97,49,59,160,169,	0,939,1183,1684,1935,2587,15057,
#Partially deleted in new
chr11	44936217	44950866	chr11:44936217-44950866	1	-	44936558	44938335	789624	6	472,97,49,59,211,190,	0,585,1086,1337,1989,14459,
#Deleted in new
chr11	44936455	44937250	chr11:44936455-44937250	0	-	44936455	44936455	8553170	2	444,142,	0,653,
#Partially deleted in new
chr11	44936667	44950833	chr11:44936667-44950833	0	-	44936667	44936667	8553170	4	685,59,160,157,	0,887,1539,14009,
#Partially deleted in new
chr11	44936803	44950837	chr11:44936803-44950837	0	-	44937159	44938335	789624	5	96,244,59,160,161,	0,305,751,1403,13873,
#Partially deleted in new
chr11	44936842	44943191	chr11:44936842-44943191	0	-	44936842	44938335	789624	7	57,49,59,160,116,75,40,	0,461,712,1364,2323,4160,6309,
#Partially deleted in new
chr11	44936849	44947219	chr11:44936849-44947219	0	-	44936849	44947091	789624	5	50,49,59,160,181,	0,454,705,1357,10189,
#Partially deleted in new
chr11	44936856	44947253	chr11:44936856-44947253	0	-	44936856	44938335	789624	6	43,49,59,160,116,215,	0,447,698,1350,2309,10182,
#Partially deleted in new
chr11	44936882	44938335	chr11:44936882-44938335	1	-	44936882	44938335	789624	3	17,49,129,	0,421,1324,
#Partially deleted in new
chr11	44937303	44950894	chr11:44937303-44950894	0	-	44937303	44938335	789624	5	49,59,160,116,218,	0,251,903,1862,13373,
#Partially deleted in new
chr11	44937320	44951042	chr11:44937320-44951042	0	-	44937320	44938335	789624	5	32,59,160,116,166,	0,234,886,1845,13556,
#Partially deleted in new
chr11	44937554	44950208	chr11:44937554-44950208	0	-	44937554	44938335	789624	4	59,160,116,236,	0,652,1611,12418,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	44973901	44978028	chr11:44973901-44978028	3	+	44973901	44973901	5263520	4	506,98,94,541,	0,894,3407,3586,
#Partially deleted in new
chr11	45095805	45224908	chr11:45095805-45224908	1	+	45095805	45224908	0	7	96,125,104,263,68,188,692,	0,85955,86440,87055,108905,123764,128411,
#Partially deleted in new
chr11	45146674	45204777	chr11:45146674-45204777	0	+	45181766	45204777	789624	5	203,125,104,263,67,	0,35086,35571,36186,58036,
#Partially deleted in new
chr11	45147342	45225087	chr11:45147342-45225087	1	+	45181766	45224908	0	7	239,125,104,263,68,188,871,	0,34418,34903,35518,57368,72227,76874,
#Partially deleted in new
chr11	45147342	45235110	chr11:45147342-45235110	3	+	45181766	45228159	789624	8	239,125,104,263,68,188,627,9116,	0,34418,34903,35518,57368,72227,76874,78652,
#Partially deleted in new
chr11	45181876	45214713	chr11:45181876-45214713	0	+	45181876	45213043	789624	6	9,104,263,68,422,2245,	0,369,984,22834,26997,30592,
#Partially deleted in new
chr11	45182916	45226183	chr11:45182916-45226183	0	+	45182916	45182916	8553170	4	207,68,188,189,	0,21794,36653,43078,
#Partially deleted in new
chr11	45215814	45235292	chr11:45215814-45235292	3	-	45215814	45215814	8553170	2	389,178,	0,19300,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	45240300	45286319	chr11:45240300-45286319	3	-	45244051	45286207	0	6	4056,130,302,135,226,295,	0,6082,12120,13969,15365,45724,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	45243700	45286067	chr11:45243700-45286067	0	-	45269490	45286067	789624	8	656,130,302,135,226,116,102,43,	0,2682,8720,10569,11965,14680,25706,42324,
#Partially deleted in new
chr11	45252588	45285924	chr11:45252588-45285924	0	-	45252588	45285924	789624	4	134,135,226,62,	0,1681,3077,33274,
#Deleted in new
chr11	45253883	45254583	chr11:45253883-45254583	3	+	45253883	45253883	8553170	2	24,399,	0,301,
#Deleted in new
chr11	45253981	45254649	chr11:45253981-45254649	1	+	45253981	45253981	8553170	3	81,92,276,	0,203,392,
#Partially deleted in new
chr11	45355370	45366121	chr11:45355370-45366121	3	+	45355370	45355370	8553170	2	232,373,	0,10378,
#Deleted in new
chr11	45355499	45356653	chr11:45355499-45356653	0	+	45355499	45355499	789624	2	103,258,	0,896,
#Deleted in new
chr11	45355500	45356648	chr11:45355500-45356648	1	+	45355500	45355500	789624	2	102,770,	0,378,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	45371396	45388508	chr11:45371396-45388508	3	+	45371396	45371396	789624	5	1444,233,204,83,633,	0,7958,8538,15830,16479,
#Partially deleted in new
chr11	45387214	45513802	chr11:45387214-45513802	3	-	45387214	45387214	8553170	3	71,5,530,	0,102763,126058,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	45399447	45400528	chr11:45399447-45400528	3	+	45399447	45399447	8553170	2	118,443,	0,638,
#Partially deleted in new
chr11	45489688	45542474	chr11:45489688-45542474	3	-	45489688	45489688	8553170	5	83,93,232,134,31,	0,41836,42960,43303,52755,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	45489698	45542474	chr11:45489698-45542474	1	-	45489698	45489698	8553170	6	73,93,134,110,127,31,	0,41826,43293,43724,51444,52745,
#Deleted in new
chr11	45514186	45514451	chr11:45514186-45514451	7	+	45514186	45514186	16724991	1	265,	0,
#Deleted in new
chr11	45531215	45533534	chr11:45531215-45533534	0	-	45531215	45531215	8553170	4	402,232,134,112,	0,1433,1776,2207,
#Partially deleted in new
chr11	45531319	45542473	chr11:45531319-45542473	0	-	45531319	45531319	8553170	4	298,134,110,30,	0,1672,2103,11124,
#Deleted in new
chr11	45582524	45583474	chr11:45582524-45583474	3	+	45582524	45582524	8553170	2	205,359,	0,591,
#Partially deleted in new
chr11	45648876	45665622	chr11:45648876-45665622	3	-	45649687	45650923	789624	4	2089,98,86,445,	0,3116,3644,16301,
#Deleted in new
chr11	45648878	45649634	chr11:45648878-45649634	0	-	45648878	45648878	8553170	2	212,304,	0,452,
#Partially deleted in new
chr11	45651232	45665594	chr11:45651232-45665594	0	-	45651232	45651232	8553170	3	858,86,417,	0,1288,13945,
#Deleted in new
chr11	45651528	45652691	chr11:45651528-45652691	3	+	45651528	45651528	8553170	2	26,223,	0,940,
#Deleted in new
chr11	45691703	45691776	chr11:45691703-45691776	3	-	45691703	45691703	5263520	1	73,	0,
#Partially deleted in new
chr11	45722307	45724299	chr11:45722307-45724299	1	+	45722307	45722307	8553170	3	150,253,138,	0,1012,1854,
#Partially deleted in new
chr11	45722307	45724553	chr11:45722307-45724553	0	+	45722307	45722307	8553170	2	150,1234,	0,1012,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	45722361	45744254	chr11:45722361-45744254	0	+	45722361	45722361	8553170	5	96,95,259,133,226,	0,1116,12179,17048,21667,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	45722374	45744254	chr11:45722374-45744254	3	+	45722374	45722374	8553170	7	83,95,259,133,63,199,226,	0,1103,12166,17035,18526,19289,21654,
#Partially deleted in new
chr11	45722400	45724551	chr11:45722400-45724551	1	+	45722400	45722400	789624	3	57,95,390,	0,1077,1761,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	45722411	45744254	chr11:45722411-45744254	1	+	45722411	45722411	8553170	7	46,95,259,133,318,247,226,	0,1066,12129,16998,19133,20012,21617,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	45722461	45742163	chr11:45722461-45742163	1	+	45722461	45722461	8553170	4	70,95,133,619,	0,1016,16948,19083,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	45722461	45739777	chr11:45722461-45739777	0	+	45722461	45722461	8553170	4	70,95,259,368,	0,1016,12079,16948,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	45723308	45744250	chr11:45723308-45744250	1	+	45723308	45723308	8553170	4	264,259,133,222,	0,11232,16101,20720,
#Partially deleted in new
chr11	45733993	45735766	chr11:45733993-45735766	3	-	45733993	45733993	8553170	2	797,63,	0,1710,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	45739449	45744250	chr11:45739449-45744250	0	+	45739449	45739449	8553170	3	93,318,222,	0,2095,4579,
#Partially deleted in new
chr11	45750822	45751871	chr11:45750822-45751871	3	-	45750822	45750822	8553170	2	386,148,	0,901,
#Partially deleted in new
chr11	45751105	45751573	chr11:45751105-45751573	0	-	45751105	45751105	8553170	2	103,63,	0,405,
#Deleted in new
chr11	45771431	45772358	chr11:45771431-45772358	3	+	45771431	45771431	5263520	2	283,366,	0,561,
#Partially deleted in new
chr11	45804071	45811558	chr11:45804071-45811558	1	+	45805840	45811335	789624	3	446,527,783,	0,1738,6704,
#Deleted in new
chr11	45804085	45806056	chr11:45804085-45806056	0	+	45805840	45806056	789624	2	335,247,	0,1724,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	45804405	45813015	chr11:45804405-45813015	3	+	45805801	45811335	789624	2	1931,2240,	0,6370,
#Deleted in new
chr11	45805148	45806336	chr11:45805148-45806336	0	+	45805840	45806336	789624	2	168,527,	0,661,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	45813218	45825258	chr11:45813218-45825258	3	+	45813218	45813218	8553170	3	56,282,131,	0,10642,11909,
#Partially deleted in new
chr11	45847117	45881233	chr11:45847117-45881233	1	+	45847249	45872231	789624	12	164,109,143,185,89,141,312,152,203,93,142,320,	0,8864,11613,13730,14942,20494,22388,22935,23212,23724,24974,33796,
#Partially deleted in new
chr11	45847405	45883247	chr11:45847405-45883247	1	+	45847427	45872231	789624	12	300,109,143,185,89,141,312,152,203,93,142,2334,	0,8576,11325,13442,14654,20206,22100,22647,22924,23436,24686,33508,
#Partially deleted in new
chr11	45847405	45883248	chr11:45847405-45883248	3	+	45847427	45872231	789624	12	300,109,143,185,89,141,312,152,203,93,142,2335,	0,8576,11325,13442,14654,20206,22100,22647,22924,23436,24686,33508,
#Partially deleted in new
chr11	45847474	45881049	chr11:45847474-45881049	1	+	45847490	45872231	789624	12	231,109,143,185,89,141,312,152,203,93,142,136,	0,8507,11256,13373,14585,20137,22031,22578,22855,23367,24617,33439,
#Partially deleted in new
chr11	45847477	45862115	chr11:45847477-45862115	0	+	45847477	45847477	8553170	4	228,109,143,56,	0,8504,11253,14582,
#Partially deleted in new
chr11	45847477	45856316	chr11:45847477-45856316	0	+	45847477	45847477	8553170	2	228,335,	0,8504,
#Partially deleted in new
chr11	45847477	45860954	chr11:45847477-45860954	0	+	45847477	45847477	8553170	4	228,109,143,55,	0,8504,11253,13422,
#Partially deleted in new
chr11	45858274	45862148	chr11:45858274-45862148	0	+	45858274	45858274	8553170	4	107,143,185,89,	0,456,2573,3785,
#Partially deleted in new
chr11	45860979	45867940	chr11:45860979-45867940	0	+	45860979	45860979	8553170	2	53,329,	0,6632,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	45861161	45869671	chr11:45861161-45869671	0	+	45861161	45861161	8553170	3	987,141,166,	0,6450,8344,
#Partially deleted in new
chr11	45867427	45869723	chr11:45867427-45869723	0	+	45867427	45867427	8553170	2	325,218,	0,2078,
#Partially deleted in new
chr11	45870612	45880992	chr11:45870612-45880992	0	+	45870612	45870612	8553170	3	322,142,79,	0,1479,10301,
#Partially deleted in new
chr11	45885650	45906465	chr11:45885650-45906465	3	+	45885820	45905721	0	12	271,106,315,82,813,76,173,110,117,71,99,817,	0,12434,14487,16329,16721,17714,18338,18804,19067,19320,19500,19998,
#Deleted in new
chr11	45896549	45906465	chr11:45896549-45906465	1	+	45896879	45905721	789624	12	401,106,315,82,813,76,173,110,117,71,99,817,	0,1535,3588,5430,5822,6815,7439,7905,8168,8421,8601,9099,
#Deleted in new
chr11	45901932	45902743	chr11:45901932-45902743	0	+	45901932	45901932	8553170	2	129,372,	0,439,
#Deleted in new
chr11	45905940	45906461	chr11:45905940-45906461	3	-	45905940	45905940	8553170	2	356,53,	0,468,
#Deleted in new
chr11	45906512	45907272	chr11:45906512-45907272	0	-	45906512	45906512	8553170	1	760,	0,
#Deleted in new
chr11	45906533	45907282	chr11:45906533-45907282	3	-	45906568	45907245	789624	3	157,74,138,	0,335,611,
#Partially deleted in new
chr11	45909668	45917829	chr11:45909668-45917829	1	-	45910088	45917811	789624	11	509,65,120,73,153,81,101,134,77,36,130,	0,1229,4150,4462,4647,4935,5799,6034,6558,7789,8031,
#Partially deleted in new
chr11	45910173	45918055	chr11:45910173-45918055	3	-	45910253	45917811	789624	11	139,65,120,73,153,81,101,134,77,36,356,	0,724,3645,3957,4142,4430,5294,5529,6053,7284,7526,
#Partially deleted in new
chr11	45910204	45918812	chr11:45910204-45918812	1	-	45910253	45915776	789624	11	108,65,120,73,153,81,101,134,77,36,691,	0,693,3614,3926,4111,4399,5263,5498,6022,7253,7917,
#Partially deleted in new
chr11	45913844	45917825	chr11:45913844-45917825	0	-	45913844	45917811	789624	6	94,73,153,81,36,126,	0,286,471,759,3613,3855,
#Partially deleted in new
chr11	45914122	45917867	chr11:45914122-45917867	0	-	45914122	45914122	8553170	6	81,153,81,101,36,94,	0,193,481,1345,3335,3651,
#Partially deleted in new
chr11	45914130	45918021	chr11:45914130-45918021	0	-	45914130	45915776	789624	8	73,153,81,101,134,77,36,248,	0,185,473,1337,1572,2096,3327,3643,
#Deleted in new
chr11	45914263	45915543	chr11:45914263-45915543	0	-	45914263	45914263	8553170	3	205,81,76,	0,340,1204,
#Partially deleted in new
chr11	45915468	45917828	chr11:45915468-45917828	0	-	45917652	45917811	789624	5	100,134,77,36,241,	0,234,758,1989,2119,
#Partially deleted in new
chr11	45915495	45918080	chr11:45915495-45918080	0	-	45917020	45917811	789624	6	73,134,77,168,36,307,	0,207,731,1478,1962,2278,
#Partially deleted in new
chr11	45915702	45918078	chr11:45915702-45918078	0	-	45917106	45917811	789624	5	134,77,168,36,379,	0,524,1271,1755,1997,
#Partially deleted in new
chr11	45921620	45929096	chr11:45921620-45929096	1	+	45922882	45928845	789624	15	73,144,110,83,124,172,105,113,126,156,161,279,150,196,467,	0,1200,1437,1852,2533,2885,3164,4418,4601,4821,5090,5694,6299,6556,7009,
#Partially deleted in new
chr11	45921644	45929096	chr11:45921644-45929096	3	+	45922882	45928845	789624	14	49,347,83,124,172,105,113,126,156,161,279,150,196,467,	0,1176,1828,2509,2861,3140,4394,4577,4797,5066,5670,6275,6532,6985,
#Partially deleted in new
chr11	45922691	45929096	chr11:45922691-45929096	1	+	45922882	45928845	789624	14	37,347,83,124,172,105,113,126,156,161,279,150,196,467,	0,129,781,1462,1814,2093,3347,3530,3750,4019,4623,5228,5485,5938,
#Partially deleted in new
chr11	45922777	45929096	chr11:45922777-45929096	1	+	45922882	45928845	789624	13	390,83,124,172,105,113,126,156,161,279,150,196,467,	0,695,1376,1728,2007,3261,3444,3664,3933,4537,5142,5399,5852,
#Partially deleted in new
chr11	45924149	45929096	chr11:45924149-45929096	0	+	45924149	45924149	8553170	10	128,172,105,309,156,161,279,321,196,467,	0,356,635,1889,2292,2561,3165,3599,4027,4480,
#Partially deleted in new
chr11	45924453	45926552	chr11:45924453-45926552	0	+	45924453	45924453	8553170	4	224,105,126,111,	0,331,1768,1988,
#Partially deleted in new
chr11	45924616	45926830	chr11:45924616-45926830	0	+	45924616	45924616	8553170	4	273,126,156,120,	0,1605,1825,2094,
#Deleted in new
chr11	45926362	45929082	chr11:45926362-45929082	0	+	45926362	45926362	8553170	6	235,161,279,150,196,453,	0,348,952,1557,1814,2267,
#Deleted in new
chr11	45926450	45927938	chr11:45926450-45927938	0	+	45926450	45927938	789624	4	147,161,149,19,	0,260,994,1469,
#Deleted in new
chr11	45928035	45929096	chr11:45928035-45929096	0	+	45928035	45928924	789624	2	34,467,	0,594,
#Partially deleted in new
chr11	45929322	45971369	chr11:45929322-45971369	0	-	45929322	45929322	8553170	10	6417,76,156,164,61,80,52,99,294,1555,	0,7171,8834,16517,19563,20079,20883,24204,35992,40492,
#Partially deleted in new
chr11	45932565	46121178	chr11:45932565-46121178	3	-	45933967	46084219	0	18	1660,104,76,156,23,61,80,52,99,294,90,252,207,66,33,137,41,244,	0,3070,3928,5591,13510,16320,16836,17640,20961,32749,37249,38550,47194,144188,146568,151600,159617,188369,
#Partially deleted in new
chr11	45933346	45938264	chr11:45933346-45938264	0	-	45935183	45938264	789624	5	879,126,104,76,108,	0,1774,2289,3147,4810,
#Partially deleted in new
chr11	45933480	46121010	chr11:45933480-46121010	1	-	45933967	46084219	0	18	745,104,76,156,164,61,80,52,99,294,87,252,207,66,33,137,41,76,	0,2155,3013,4676,12359,15405,15921,16725,20046,31834,36334,37635,46279,143273,145653,150685,158702,187454,
#Partially deleted in new
chr11	45933830	45936507	chr11:45933830-45936507	0	-	45934100	45936507	789624	4	395,37,104,14,	0,1290,1805,2663,
#Partially deleted in new
chr11	45933984	45945869	chr11:45933984-45945869	0	-	45933984	45945869	789624	4	241,104,76,30,	0,1651,2509,11855,
#Partially deleted in new
chr11	45935693	45936837	chr11:45935693-45936837	0	-	45935693	45935693	8553170	2	46,344,	0,800,
#Partially deleted in new
chr11	45938156	45965458	chr11:45938156-45965458	0	-	45938156	45938156	8553170	6	156,61,80,52,99,144,	0,10729,11245,12049,15370,27158,
#Partially deleted in new
chr11	45938218	45953615	chr11:45938218-45953615	0	-	45938218	45938218	8553170	6	94,259,61,80,52,89,	0,7621,10667,11183,11987,15308,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	45971138	46121047	chr11:45971138-46121047	0	-	46049401	46084219	789624	9	229,207,98,66,33,137,127,41,113,	0,8621,78261,105615,107995,113027,119316,121044,149796,
#Partially deleted in new
chr11	45971277	46027078	chr11:45971277-46027078	0	-	45971277	45971277	8553170	3	90,207,268,	0,8482,55533,
#Partially deleted in new
chr11	45971346	46120963	chr11:45971346-46120963	0	-	45971346	46084219	789624	7	21,207,87,33,137,41,29,	0,8413,105407,107787,112819,120836,149588,
#Partially deleted in new
chr11	45971347	46092205	chr11:45971347-46092205	0	-	45971347	46084219	789624	6	20,207,87,33,137,23,	0,8412,105406,107786,112818,120835,
#Partially deleted in new
chr11	45979815	46121104	chr11:45979815-46121104	0	-	45979815	46084219	789624	5	151,66,33,137,170,	0,96938,99318,104350,141119,
#Partially deleted in new
chr11	45979862	46119787	chr11:45979862-46119787	0	-	45979862	46079151	789624	8	104,66,33,57,137,41,59,64,	0,96891,99271,103692,104303,112320,138879,139861,
#Partially deleted in new
chr11	46076753	46119853	chr11:46076753-46119853	0	-	46076753	46084219	789624	6	66,33,137,41,59,130,	0,2380,7412,15429,41988,42970,
#Partially deleted in new
chr11	46079140	46119844	chr11:46079140-46119844	0	-	46079140	46084219	789624	6	26,137,41,193,59,121,	0,5025,13042,38781,39601,40583,
#Partially deleted in new
chr11	46084185	46119862	chr11:46084185-46119862	0	-	46084185	46084219	789624	4	117,41,193,139,	0,7997,33736,35538,
#Partially deleted in new
chr11	46084192	46119835	chr11:46084192-46119835	0	-	46084192	46084219	789624	5	110,41,224,59,112,	0,7990,33729,34549,35531,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	46116577	46117318	chr11:46116577-46117318	3	+	46116577	46116577	8553170	2	149,456,	0,285,
#Deleted in new
chr11	46120388	46121058	chr11:46120388-46121058	0	-	46120388	46120388	8553170	2	152,124,	0,546,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	46123030	46177104	chr11:46123030-46177104	0	+	46123030	46123030	8553170	4	142,139,106,756,	0,8582,51554,53318,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	46123572	46177106	chr11:46123572-46177106	3	+	46123572	46123572	8553170	4	203,139,106,758,	0,8040,51012,52776,
#Partially deleted in new
chr11	46142715	46143594	chr11:46142715-46143594	7	+	46142715	46142715	16724991	1	879,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	46171946	46177105	chr11:46171946-46177105	0	+	46171946	46171946	789624	3	78,106,757,	0,2638,4402,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	46213823	46219655	chr11:46213823-46219655	0	-	46213823	46213823	8553170	3	401,165,75,	0,1903,5757,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	46213823	46219854	chr11:46213823-46219854	0	-	46213823	46213823	8553170	3	401,165,83,	0,1903,5948,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	46213823	46220229	chr11:46213823-46220229	3	-	46213823	46213823	8553170	3	401,165,288,	0,1903,6118,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	46213827	46220438	chr11:46213827-46220438	0	-	46213827	46213827	8553170	3	397,165,76,	0,1899,6535,
#Partially deleted in new
chr11	46214099	46219655	chr11:46214099-46219655	1	-	46214099	46214099	8553170	4	125,165,116,75,	0,1627,2153,5481,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	46238381	46239267	chr11:46238381-46239267	3	+	46238381	46238381	8553170	2	124,529,	0,357,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	46256354	46274547	chr11:46256354-46274547	3	-	46256354	46256354	8553170	2	187,167,	0,18026,
#Partially deleted in new
chr11	46277660	46321422	chr11:46277660-46321422	3	+	46278111	46320746	789624	12	553,229,185,79,158,150,59,69,100,127,265,713,	0,22274,30155,32328,33371,34664,34951,35190,38625,39700,42603,43049,
#Partially deleted in new
chr11	46295125	46307939	chr11:46295125-46307939	0	+	46299970	46307939	789624	3	208,229,124,	0,4809,12690,
#Partially deleted in new
chr11	46310913	46312623	chr11:46310913-46312623	0	+	46310913	46310913	8553170	3	276,150,12,	0,1411,1698,
#Partially deleted in new
chr11	46311156	46315387	chr11:46311156-46315387	0	+	46311156	46315231	789624	5	33,150,59,69,217,	0,1168,1455,1694,4014,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	46315478	46320299	chr11:46315478-46320299	0	+	46315478	46315478	8553170	3	602,127,36,	0,1882,4785,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	46315660	46321409	chr11:46315660-46321409	0	+	46315660	46315660	8553170	4	725,127,265,700,	0,1700,4603,5049,
#Partially deleted in new
chr11	46332904	46380554	chr11:46332904-46380554	1	+	46333275	46379947	0	31	583,109,96,75,57,69,72,117,72,96,83,61,114,141,79,56,63,74,112,200,101,80,70,41,140,32,44,121,34,100,724,	0,34386,34747,35100,36589,37036,38408,38582,38799,39170,39523,39712,39866,40056,41252,41494,41699,41861,42029,42527,42946,43161,43423,43619,44168,45293,45552,46086,46298,46564,46926,
#Partially deleted in new
chr11	46338597	46368045	chr11:46338597-46368045	0	+	46367741	46368045	789624	4	293,109,96,44,	0,28693,29054,29404,
#Partially deleted in new
chr11	46345266	46380120	chr11:46345266-46380120	3	+	46345409	46379947	0	31	319,109,93,78,57,69,72,117,72,96,83,61,114,141,79,56,63,74,112,200,101,80,70,41,140,32,44,121,34,100,290,	0,22024,22388,22735,24227,24674,26046,26220,26437,26808,27161,27350,27504,27694,28890,29132,29337,29499,29667,30165,30584,30799,31061,31257,31806,32931,33190,33724,33936,34202,34564,
#Partially deleted in new
chr11	46345402	46380110	chr11:46345402-46380110	1	+	46371510	46379947	789624	28	183,57,69,72,117,72,96,83,61,114,141,79,56,63,74,112,200,101,80,70,41,140,32,44,121,34,100,280,	0,24091,24538,25910,26084,26301,26672,27025,27214,27368,27558,28754,28996,29201,29363,29531,30029,30448,30663,30925,31121,31670,32795,33054,33588,33800,34066,34428,
#Partially deleted in new
chr11	46345431	46379080	chr11:46345431-46379080	0	+	46345431	46345431	8553170	26	154,109,96,78,57,72,117,72,96,83,61,114,141,79,56,63,74,112,200,101,80,70,41,140,32,624,	0,21859,22220,22570,24062,25881,26055,26272,26643,26996,27185,27339,27529,28725,28967,29172,29334,29502,30000,30419,30634,30896,31092,31641,32766,33025,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	46345433	46369175	chr11:46345433-46369175	0	+	46345433	46345433	8553170	3	152,109,1524,	0,21857,22218,
#Partially deleted in new
chr11	46345436	46380554	chr11:46345436-46380554	0	+	46345526	46369432	789624	31	149,109,96,75,187,69,72,117,72,96,83,61,114,141,79,56,63,74,112,200,101,80,70,41,140,32,44,121,34,100,724,	0,21854,22215,22568,23927,24504,25876,26050,26267,26638,26991,27180,27334,27524,28720,28962,29167,29329,29497,29995,30414,30629,30891,31087,31636,32761,33020,33554,33766,34032,34394,
#Partially deleted in new
chr11	46347462	46380282	chr11:46347462-46380282	1	+	46347659	46379947	0	31	358,109,96,78,57,69,72,117,72,96,83,61,114,141,79,56,63,74,112,200,101,80,70,41,140,32,44,121,34,115,452,	0,19828,20189,20539,22031,22478,23850,24024,24241,24612,24965,25154,25308,25498,26694,26936,27141,27303,27471,27969,28388,28603,28865,29061,29610,30735,30994,31528,31740,31991,32368,
#Partially deleted in new
chr11	46347522	46371384	chr11:46347522-46371384	0	+	46347659	46369497	789624	4	298,57,69,72,	0,21971,22418,23790,
#Partially deleted in new
chr11	46347571	46380554	chr11:46347571-46380554	1	+	46347659	46379947	0	31	249,109,96,75,57,69,72,117,72,96,83,61,114,141,79,56,63,74,112,200,101,80,70,41,140,32,44,121,34,100,724,	0,19719,20080,20433,21922,22369,23741,23915,24132,24503,24856,25045,25199,25389,26585,26827,27032,27194,27362,27860,28279,28494,28756,28952,29501,30626,30885,31419,31631,31897,32259,
#Partially deleted in new
chr11	46347587	46380367	chr11:46347587-46380367	1	+	46347659	46379947	0	30	233,109,96,78,57,72,117,72,96,83,61,114,141,79,56,63,74,112,200,101,80,70,41,140,32,44,121,34,100,537,	0,19703,20064,20414,21906,23725,23899,24116,24487,24840,25029,25183,25373,26569,26811,27016,27178,27346,27844,28263,28478,28740,28936,29485,30610,30869,31403,31615,31881,32243,
#Partially deleted in new
chr11	46347587	46379947	chr11:46347587-46379947	1	+	46347659	46379947	0	31	233,109,96,78,57,69,72,117,72,96,83,61,114,141,79,56,63,74,112,200,101,80,70,41,140,32,44,121,34,100,117,	0,19703,20064,20414,21906,22353,23725,23899,24116,24487,24840,25029,25183,25373,26569,26811,27016,27178,27346,27844,28263,28478,28740,28936,29485,30610,30869,31403,31615,31881,32243,
#Partially deleted in new
chr11	46361521	46367656	chr11:46361521-46367656	0	+	46361521	46361521	8553170	4	185,283,109,5,	0,4722,5769,6130,
#Partially deleted in new
chr11	46361594	46380554	chr11:46361594-46380554	1	+	46366256	46379947	0	32	112,741,109,96,75,57,69,72,117,72,96,83,61,114,141,79,56,63,74,112,200,101,80,70,41,140,32,44,121,34,100,724,	0,4649,5696,6057,6410,7899,8346,9718,9892,10109,10480,10833,11022,11176,11366,12562,12804,13009,13171,13339,13837,14256,14471,14733,14929,15478,16603,16862,17396,17608,17874,18236,
#Partially deleted in new
chr11	46361606	46368007	chr11:46361606-46368007	0	+	46361606	46361606	8553170	4	357,109,96,6,	0,5684,6045,6395,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr11	46367314	46380553	chr11:46367314-46380553	0	+	46367314	46367314	8553170	26	85,96,2008,72,117,72,96,83,61,114,141,79,56,63,74,112,200,101,80,70,41,140,32,655,366,723,	0,337,687,3998,4172,4389,4760,5113,5302,5456,5646,6842,7084,7289,7451,7619,8117,8536,8751,9013,9209,9758,10883,11142,11888,12516,
#Partially deleted in new
chr11	46367651	46371384	chr11:46367651-46371384	0	+	46367651	46371384	789624	4	96,57,69,72,	0,1842,2289,3661,
#Deleted in new
chr11	46371724	46372897	chr11:46371724-46372897	0	+	46371724	46371724	8553170	3	51,96,470,	0,350,703,
#Deleted in new
chr11	46374428	46375868	chr11:46374428-46375868	0	+	46374428	46375868	789624	5	26,236,112,200,18,	0,175,505,1003,1422,
#Deleted in new
chr11	46375023	46377350	chr11:46375023-46377350	0	+	46375023	46375023	8553170	7	22,200,101,80,70,41,278,	0,408,827,1042,1304,1500,2049,
#Deleted in new
chr11	46376401	46376484	chr11:46376401-46376484	3	+	46376401	46376401	5263520	1	83,	0,
#Deleted in new
chr11	46376519	46380551	chr11:46376519-46380551	0	+	46376519	46376519	8553170	3	2592,366,721,	0,2683,3311,
#Deleted in new
chr11	46377147	46379568	chr11:46377147-46379568	0	+	46377147	46377147	8553170	6	65,32,44,218,34,100,	0,1050,1309,1746,2055,2321,
#Deleted in new
chr11	46377967	46380551	chr11:46377967-46380551	0	+	46377967	46377967	8553170	4	1144,34,100,721,	0,1235,1501,1863,
#Deleted in new
chr11	46377969	46378927	chr11:46377969-46378927	0	+	46377969	46377969	8553170	2	260,471,	0,487,
#Deleted in new
chr11	46380755	46383799	chr11:46380755-46383799	3	+	46382057	46383494	0	5	428,77,168,162,331,	0,1301,1538,1831,2713,
#Deleted in new
chr11	46380936	46382364	chr11:46380936-46382364	0	+	46382057	46382364	789624	3	392,77,71,	0,1120,1357,
#Deleted in new
chr11	46381060	46382821	chr11:46381060-46382821	0	+	46381060	46381060	8553170	4	123,77,168,235,	0,996,1233,1526,
#Deleted in new
chr11	46381067	46383825	chr11:46381067-46383825	1	+	46382057	46383494	0	5	221,77,168,162,357,	0,989,1226,1519,2401,
#Deleted in new
chr11	46381206	46382736	chr11:46381206-46382736	0	+	46382057	46382736	789624	4	82,77,168,150,	0,850,1087,1380,
#Deleted in new
chr11	46381654	46383837	chr11:46381654-46383837	1	+	46382057	46383766	789624	4	104,77,85,369,	0,402,1009,1814,
#Deleted in new
chr11	46381668	46383825	chr11:46381668-46383825	1	+	46382057	46383494	0	4	90,77,162,357,	0,388,918,1800,
#Deleted in new
chr11	46381675	46383806	chr11:46381675-46383806	1	+	46382057	46383494	0	5	83,77,168,162,338,	0,381,618,911,1793,
#Deleted in new
chr11	46381692	46383570	chr11:46381692-46383570	0	+	46381692	46381692	789624	4	66,168,162,102,	0,601,894,1776,
#Deleted in new
chr11	46381710	46383837	chr11:46381710-46383837	1	+	46382057	46383494	0	5	175,77,168,162,369,	0,346,583,876,1758,
#Deleted in new
chr11	46381710	46382770	chr11:46381710-46382770	0	+	46381710	46381710	8553170	3	423,168,184,	0,583,876,
#Deleted in new
chr11	46381736	46383806	chr11:46381736-46383806	0	+	46382057	46382813	789624	5	149,77,168,607,338,	0,320,557,850,1732,
#Deleted in new
chr11	46381752	46383783	chr11:46381752-46383783	1	+	46382057	46383494	0	4	381,168,162,315,	0,541,834,1716,
#Deleted in new
chr11	46385097	46386608	chr11:46385097-46386608	3	-	46385117	46386557	0	1	1511,	0,
#Partially deleted in new
chr11	46396413	46591364	chr11:46396413-46591364	3	-	46397449	46548380	789624	19	1530,194,93,140,155,189,111,101,81,180,87,1037,147,67,173,184,59,255,240,	0,12099,13862,21499,37060,38435,47074,97194,97710,111777,116313,145531,146838,147561,149190,150699,151403,151832,194711,
#Partially deleted in new
chr11	46396413	46593948	chr11:46396413-46593948	1	-	46397449	46548380	789624	18	1530,194,93,140,155,189,111,101,81,180,1037,147,67,173,184,59,255,121,	0,12099,13862,21499,37060,38435,47074,97194,97710,111777,145531,146838,147561,149190,150699,151403,151832,197414,
#Partially deleted in new
chr11	46396413	46594021	chr11:46396413-46594021	1	-	46397449	46548380	789624	17	1530,194,93,140,155,189,111,101,81,87,1454,67,173,184,59,255,194,	0,12099,13862,21499,37060,38435,47074,97194,97710,116313,145531,147561,149190,150699,151403,151832,197414,
#Partially deleted in new
chr11	46396414	46591423	chr11:46396414-46591423	1	-	46397449	46548380	789624	18	1529,194,93,140,155,189,111,101,81,180,87,1454,67,173,184,59,255,299,	0,12098,13861,21498,37059,38434,47073,97193,97709,111776,116312,145530,147560,149189,150698,151402,151831,194710,
#Partially deleted in new
chr11	46397383	46417995	chr11:46397383-46417995	0	-	46397449	46417995	789624	3	560,194,83,	0,11129,20529,
#Partially deleted in new
chr11	46397449	46594045	chr11:46397449-46594045	1	-	46397449	46548380	789624	17	494,194,93,140,155,189,111,101,81,180,1454,67,173,184,59,209,218,	0,11063,12826,20463,36024,37399,46038,96158,96674,110741,144495,146525,148154,149663,150367,150796,196378,
#Deleted in new
chr11	46428652	46429150	chr11:46428652-46429150	7	-	46428652	46428652	16724991	1	498,	0,
#Partially deleted in new
chr11	46434848	46493893	chr11:46434848-46493893	0	-	46434848	46434848	8553170	3	189,111,286,	0,8639,58759,
#Deleted in new
chr11	46451804	46451889	chr11:46451804-46451889	3	-	46451804	46451804	5263520	1	85,	0,
#Deleted in new
chr11	46451806	46451887	chr11:46451806-46451887	3	+	46451806	46451806	5263520	1	81,	0,
#Partially deleted in new
chr11	46490997	46495511	chr11:46490997-46495511	0	-	46490997	46490997	8553170	4	405,101,81,942,	0,2610,3126,3572,
#Partially deleted in new
chr11	46504478	46530607	chr11:46504478-46530607	0	-	46504478	46504478	8553170	4	191,180,87,25,	0,3712,8248,26104,
#Partially deleted in new
chr11	46545700	46593998	chr11:46545700-46593998	0	-	46545700	46545700	8553170	4	76,59,255,171,	0,2116,2545,48127,
#Partially deleted in new
chr11	46548308	46594125	chr11:46548308-46594125	0	-	46548308	46548380	789624	3	192,32,298,	0,711,45519,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	46572947	46587808	chr11:46572947-46587808	3	+	46572947	46572947	8553170	3	51,596,531,	0,11887,14330,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	46602860	46617227	chr11:46602860-46617227	3	-	46603529	46616237	789624	3	1049,814,104,	0,12707,14263,
#Deleted in new
chr11	46616011	46616849	chr11:46616011-46616849	0	-	46616011	46616237	789624	2	370,347,	0,491,
#Deleted in new
chr11	46616109	46617909	chr11:46616109-46617909	0	-	46616109	46616237	789624	2	272,348,	0,1452,
#Partially deleted in new
chr11	46617540	46673041	chr11:46617540-46673041	1	+	46644291	46672332	0	17	350,51,82,81,120,47,141,41,97,99,94,137,115,78,117,129,787,	0,784,26738,27798,28329,31596,32636,38692,39554,39983,41851,47842,50232,50958,51253,51863,54714,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	46617544	46630022	chr11:46617544-46630022	0	+	46617544	46617544	8553170	3	346,116,116,	0,715,12362,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	46617548	46650216	chr11:46617548-46650216	0	+	46644291	46650216	789624	9	342,116,56,137,82,81,120,47,40,	0,711,12496,14774,26730,27790,28321,31588,32628,
#Partially deleted in new
chr11	46617562	46674520	chr11:46617562-46674520	1	+	46644291	46672332	0	18	328,116,82,81,120,47,141,41,97,99,94,111,137,115,78,117,129,2266,	0,697,26716,27776,28307,31574,32614,38670,39532,39961,41829,47286,47820,50210,50936,51231,51841,54692,
#Partially deleted in new
chr11	46617562	46672660	chr11:46617562-46672660	1	+	46645956	46672332	0	15	328,81,120,47,141,41,97,99,94,137,115,78,117,129,406,	0,27776,28307,31574,32614,38670,39532,39961,41829,47820,50210,50936,51231,51841,54692,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	46617567	46645889	chr11:46617567-46645889	0	+	46644291	46645889	789624	6	323,51,56,82,81,20,	0,757,12477,26711,27771,28302,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	46617567	46645369	chr11:46617567-46645369	0	+	46644291	46645369	789624	5	323,56,95,82,31,	0,12477,13329,26711,27771,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr11	46617576	46674520	chr11:46617576-46674520	3	+	46644291	46672332	0	17	314,56,82,81,120,47,141,41,97,99,94,137,115,78,117,129,2266,	0,12468,26702,27762,28293,31560,32600,38656,39518,39947,41815,47806,50196,50922,51217,51827,54678,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	46617577	46630028	chr11:46617577-46630028	0	+	46617577	46617577	8553170	3	313,117,122,	0,7723,12329,
#Partially deleted in new
chr11	46617581	46660029	chr11:46617581-46660029	0	+	46617581	46617581	8553170	10	309,82,81,120,47,141,41,97,99,638,	0,26697,27757,28288,31555,32595,38651,39513,39942,41810,
#Partially deleted in new
chr11	46617595	46674818	chr11:46617595-46674818	1	+	46644291	46672332	0	17	295,82,81,120,47,141,41,97,99,94,111,137,115,78,117,129,2564,	0,26683,27743,28274,31541,32581,38637,39499,39928,41796,47253,47787,50177,50903,51198,51808,54659,
#Partially deleted in new
chr11	46617599	46672726	chr11:46617599-46672726	1	+	46644291	46672332	0	18	291,82,81,120,47,141,41,97,99,94,99,111,137,115,78,117,129,472,	0,26679,27739,28270,31537,32577,38633,39495,39924,41792,46397,47249,47783,50173,50899,51194,51804,54655,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	46617790	46657191	chr11:46617790-46657191	0	+	46644291	46657191	789624	10	100,116,112,82,81,120,47,141,41,97,	0,469,20708,26488,27548,28079,31346,32386,38442,39304,
#Partially deleted in new
chr11	46644336	46656398	chr11:46644336-46656398	0	+	46644336	46644336	8553170	6	24,81,120,47,141,166,	0,1002,1533,4800,5840,11896,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	46648726	46657618	chr11:46648726-46657618	0	+	46648726	46648726	8553170	6	141,47,141,41,97,95,	0,410,1450,7506,8368,8797,
#Partially deleted in new
chr11	46656950	46664149	chr11:46656950-46664149	0	+	46656950	46656950	8553170	4	241,99,94,153,	0,573,2441,7046,
#Partially deleted in new
chr11	46656952	46667865	chr11:46656952-46667865	0	+	46656952	46656952	8553170	5	239,99,94,137,93,	0,571,2439,8430,10820,
#Partially deleted in new
chr11	46657059	46659402	chr11:46657059-46659402	0	+	46657059	46657059	8553170	2	563,11,	0,2332,
#Partially deleted in new
chr11	46659334	46668890	chr11:46659334-46668890	0	+	46659334	46659334	8553170	5	151,137,115,78,97,	0,6048,8438,9164,9459,
#Partially deleted in new
chr11	46659421	46672773	chr11:46659421-46672773	0	+	46659421	46672332	789624	2	64,519,	0,12833,
#Partially deleted in new
chr11	46663999	46669441	chr11:46663999-46669441	0	+	46663999	46669441	789624	6	96,137,115,78,117,38,	0,1383,3773,4499,4794,5404,
#Partially deleted in new
chr11	46665508	46669532	chr11:46665508-46669532	0	+	46665508	46668609	789624	4	11,115,412,129,	0,2264,2990,3895,
#Deleted in new
chr11	46667871	46668882	chr11:46667871-46668882	0	+	46667871	46668609	789624	3	16,192,89,	0,627,922,
#Deleted in new
chr11	46672794	46674513	chr11:46672794-46674513	0	+	46672794	46672794	8553170	2	448,189,	0,1530,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	46677079	46700599	chr11:46677079-46700599	3	-	46679036	46696107	0	13	2146,104,129,78,77,108,99,87,132,88,96,182,49,	0,2285,2568,3125,3407,3560,3931,4213,4971,11093,18580,18895,23471,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	46678722	46681516	chr11:46678722-46681516	0	-	46678722	46678722	8553170	8	503,104,184,78,77,108,99,224,	0,642,925,1482,1764,1917,2288,2570,
#Partially deleted in new
chr11	46679216	46696099	chr11:46679216-46696099	0	-	46679216	46696099	789624	11	9,104,129,78,77,108,99,87,88,96,125,	0,148,431,988,1270,1423,1794,2076,8956,16443,16758,
#Partially deleted in new
chr11	46681068	46697284	chr11:46681068-46697284	0	-	46681068	46696107	789624	7	41,87,132,88,96,182,264,	0,224,982,7104,14591,14906,15952,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	46686746	46697572	chr11:46686746-46697572	0	-	46686746	46686746	8553170	4	1514,96,182,552,	0,8913,9228,10274,
#Partially deleted in new
chr11	46687690	46700603	chr11:46687690-46700603	0	-	46687690	46687690	8553170	4	570,96,182,53,	0,7969,8284,12860,
#Partially deleted in new
chr11	46695082	46700615	chr11:46695082-46700615	0	-	46695082	46695082	8553170	3	673,182,65,	0,892,5468,
#Partially deleted in new
chr11	46700817	46705912	chr11:46700817-46705912	3	+	46701047	46705863	789624	5	282,278,62,260,1560,	0,581,1886,2166,3535,
#Deleted in new
chr11	46701029	46701903	chr11:46701029-46701903	0	+	46701029	46701029	8553170	2	70,505,	0,369,
#Partially deleted in new
chr11	46701030	46702895	chr11:46701030-46702895	0	+	46701030	46701030	8553170	3	69,278,192,	0,368,1673,
#Partially deleted in new
chr11	46701207	46702763	chr11:46701207-46702763	0	+	46701207	46701207	8553170	2	469,60,	0,1496,
#Partially deleted in new
chr11	46702714	46704522	chr11:46702714-46704522	0	+	46702714	46702714	8553170	2	529,170,	0,1638,
#Partially deleted in new
chr11	46719179	46739506	chr11:46719179-46739506	3	+	46719235	46739408	0	14	135,161,25,51,106,137,315,129,127,168,174,182,71,242,	0,522,1343,1610,4000,4202,6679,7318,7531,8816,9484,10200,19868,20085,
#Deleted in new
chr11	46719195	46720192	chr11:46719195-46720192	0	+	46719195	46719195	8553170	2	119,491,	0,506,
#Partially deleted in new
chr11	46719230	46739500	chr11:46719230-46739500	1	+	46719235	46739408	789624	14	84,161,25,51,106,137,315,129,127,168,57,182,71,236,	0,471,1292,1559,3949,4151,6628,7267,7480,8765,9433,10149,19817,20034,
#Partially deleted in new
chr11	46719308	46726626	chr11:46719308-46726626	0	+	46719366	46726626	789624	8	107,161,25,51,106,137,315,129,	0,393,1214,1481,3871,4073,6550,7189,
#Partially deleted in new
chr11	46723179	46726064	chr11:46723179-46726064	0	+	46723179	46723179	8553170	2	339,206,	0,2679,
#Partially deleted in new
chr11	46743047	46846229	chr11:46743047-46846229	3	-	46744022	46821231	0	44	1218,152,160,84,138,189,76,188,180,121,174,173,194,136,204,150,126,89,136,195,129,114,175,140,126,58,95,186,93,111,114,183,129,165,90,105,114,101,133,172,207,194,94,10,	0,1378,7226,7480,8070,8298,9587,10262,11840,15875,16221,17564,18952,19579,19928,20433,22083,24527,26915,27740,33207,34391,35091,35412,37146,37380,40226,41440,45633,47028,47422,52546,53764,54757,55035,58152,64983,66352,66694,67959,73150,75262,78127,103172,
#Partially deleted in new
chr11	46743535	46846308	chr11:46743535-46846308	1	-	46744022	46821231	0	43	730,152,160,84,138,189,76,188,121,174,173,194,136,204,150,126,89,136,195,129,114,175,140,126,58,95,186,93,111,114,183,129,165,90,105,114,101,133,172,207,194,94,89,	0,890,6738,6992,7582,7810,9099,9774,15387,15733,17076,18464,19091,19440,19945,21595,24039,26427,27252,32719,33903,34603,34924,36658,36892,39738,40952,45145,46540,46934,52058,53276,54269,54547,57664,64495,65864,66206,67471,72662,74774,77639,102684,
#Partially deleted in new
chr11	46743539	46821257	chr11:46743539-46821257	1	-	46744022	46821231	0	42	726,152,160,84,138,189,76,188,121,174,173,194,136,204,150,126,89,136,195,129,114,175,140,126,58,95,186,93,111,114,183,129,165,90,105,114,101,133,172,207,194,83,	0,886,6734,6988,7578,7806,9095,9770,15383,15729,17072,18460,19087,19436,19941,21591,24035,26423,27248,32715,33899,34599,34920,36654,36888,39734,40948,45141,46536,46930,52054,53272,54265,54543,57660,64491,65860,66202,67467,72658,74770,77635,
#Partially deleted in new
chr11	46744016	46770263	chr11:46744016-46770263	0	-	46744016	46744016	8553170	19	249,152,160,84,138,189,76,188,180,121,174,173,194,136,204,150,126,89,301,	0,409,6257,6511,7101,7329,8618,9293,10871,14906,15252,16595,17983,18610,18959,19464,21114,23558,25946,
#Partially deleted in new
chr11	46744164	46751382	chr11:46744164-46751382	0	-	46744386	46751382	789624	5	413,160,84,138,37,	0,6109,6363,6953,7181,
#Deleted in new
chr11	46753124	46753192	chr11:46753124-46753192	3	-	46753124	46753124	5263520	1	68,	0,
#Partially deleted in new
chr11	46753453	46760650	chr11:46753453-46760650	0	-	46753453	46760650	789624	6	44,96,121,174,24,39,	0,1434,5469,5815,6898,7158,
#Partially deleted in new
chr11	46753488	46760673	chr11:46753488-46760673	0	-	46753488	46760673	789624	6	9,180,121,174,24,62,	0,1399,5434,5780,6863,7123,
#Deleted in new
chr11	46758765	46758873	chr11:46758765-46758873	3	-	46758765	46758765	8553170	1	108,	0,
#Deleted in new
chr11	46762388	46762499	chr11:46762388-46762499	3	-	46762388	46762388	789624	1	111,	0,
#Partially deleted in new
chr11	46763145	46770263	chr11:46763145-46770263	0	-	46763145	46763145	8553170	6	34,150,126,89,136,28,	0,335,1985,4429,6817,7090,
#Partially deleted in new
chr11	46783189	46784674	chr11:46783189-46784674	0	-	46783189	46783189	8553170	2	179,187,	0,1298,
#Partially deleted in new
chr11	46797843	46802318	chr11:46797843-46802318	0	-	46797843	46797843	8553170	4	126,90,105,265,	0,239,3356,4210,
#Partially deleted in new
chr11	46816202	46826853	chr11:46816202-46826853	0	-	46816202	46821231	789624	4	202,194,94,92,	0,2107,4972,10559,
#Partially deleted in new
chr11	46820627	46846296	chr11:46820627-46846296	0	-	46820627	46820627	8553170	2	621,77,	0,25592,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	46846426	46874396	chr11:46846426-46874396	3	+	46846426	46846426	789624	3	73,108,1323,	0,183,26647,
#Partially deleted in new
chr11	46856867	46918622	chr11:46856867-46918622	3	-	46858982	46918379	789624	38	2448,142,88,68,136,114,145,109,135,219,304,226,163,172,87,141,132,190,202,106,82,209,123,177,218,157,231,126,135,126,126,120,129,117,114,117,147,295,	0,5738,7580,8251,11111,11732,12120,14657,16232,16507,17932,18588,18936,19598,19876,20331,22039,22258,24834,27003,29223,29457,32543,33076,33409,36105,37721,38298,39016,39342,40001,41690,42036,42519,42995,43394,45915,61460,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	46856869	46862933	chr11:46856869-46862933	0	-	46856869	46856869	8553170	2	2446,328,	0,5736,
#Partially deleted in new
chr11	46871524	46873754	chr11:46871524-46873754	0	-	46871524	46871524	8553170	3	109,135,380,	0,1575,1850,
#Partially deleted in new
chr11	46883923	46889687	chr11:46883923-46889687	0	-	46883923	46883923	8553170	4	53,82,178,277,	0,2167,2401,5487,
#Partially deleted in new
chr11	46899386	46918642	chr11:46899386-46918642	0	-	46899386	46918379	789624	4	117,114,117,315,	0,476,875,18941,
#Partially deleted in new
chr11	46936688	47109318	chr11:46936688-47109318	0	+	46936688	46936688	8553170	3	163,131,265,	0,115699,172365,
#Partially deleted in new
chr11	46936696	47161911	chr11:46936696-47161911	0	+	46936805	47137344	789624	10	155,103,131,245,85,86,196,110,64,448,	0,50511,115691,200619,200948,218479,220326,221116,224430,224767,
#Partially deleted in new
chr11	46936729	47155238	chr11:46936729-47155238	0	+	46936805	47023339	789624	6	122,103,56,131,85,63,	0,50478,86609,115658,200915,218446,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	46936744	47053002	chr11:46936744-47053002	0	+	46936744	46936744	8553170	3	107,103,615,	0,50463,115643,
#Partially deleted in new
chr11	46936746	47162228	chr11:46936746-47162228	3	+	46936805	47161638	789624	9	105,103,131,85,86,196,110,64,765,	0,50461,115641,200898,218429,220276,221066,224380,224717,
#Partially deleted in new
chr11	46936747	47161203	chr11:46936747-47161203	0	+	46936747	46936747	8553170	6	104,131,85,86,110,77,	0,115640,200897,218428,221065,224379,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	46936747	46987873	chr11:46936747-46987873	0	+	46936747	46936747	8553170	2	104,666,	0,50460,
#Partially deleted in new
chr11	46936753	47164385	chr11:46936753-47164385	1	+	46936805	47164252	789624	9	98,103,131,85,86,196,110,64,293,	0,50454,115634,200891,218422,220269,221059,224373,227339,
#Partially deleted in new
chr11	46936759	47138037	chr11:46936759-47138037	0	+	46936759	46936759	8553170	4	92,103,131,393,	0,50448,115628,200885,
#Partially deleted in new
chr11	46936767	47162247	chr11:46936767-47162247	1	+	46936805	47161194	789624	8	84,103,131,85,86,196,110,1121,	0,50440,115620,200877,218408,220255,221045,224359,
#Partially deleted in new
chr11	46936777	47162247	chr11:46936777-47162247	1	+	46936805	47161638	789624	9	74,103,131,85,86,196,110,64,802,	0,50430,115610,200867,218398,220245,221035,224349,224668,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	46936777	47137512	chr11:46936777-47137512	0	+	46936805	47004365	789624	5	74,103,92,131,197,	0,50430,67587,115610,200538,
#Partially deleted in new
chr11	46936778	47162245	chr11:46936778-47162245	0	+	46936805	47137653	789624	8	73,131,85,86,196,110,64,782,	0,115609,200866,218397,220244,221034,224348,224685,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	46936778	47103811	chr11:46936778-47103811	0	+	46936805	46987277	789624	5	73,139,103,131,110,	0,11247,50429,115609,166923,
#Partially deleted in new
chr11	46936779	47155209	chr11:46936779-47155209	0	+	46936805	46991543	789624	6	72,103,105,131,85,34,	0,50428,54763,115608,200865,218396,
#Partially deleted in new
chr11	46936779	47161816	chr11:46936779-47161816	0	+	46936805	47137645	789624	8	72,103,85,86,196,110,64,353,	0,50428,200865,218396,220243,221033,224347,224684,
#Deleted in new
chr11	47041026	47041945	chr11:47041026-47041945	7	-	47041026	47041026	16724991	1	919,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	47051922	47157922	chr11:47051922-47157922	0	+	47051922	47051922	8553170	6	285,131,85,86,196,110,	0,465,85722,103253,105100,105890,
#Partially deleted in new
chr11	47052453	47161190	chr11:47052453-47161190	0	+	47052453	47155210	789624	6	65,85,106,196,110,64,	0,85191,102702,104569,105359,108673,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	47052460	47159811	chr11:47052460-47159811	0	+	47052460	47159679	789624	6	58,85,86,196,110,179,	0,85184,102715,104562,105352,107172,
#Partially deleted in new
chr11	47123103	47130801	chr11:47123103-47130801	3	-	47123103	47123103	8553170	2	238,94,	0,7604,
#Partially deleted in new
chr11	47137695	47155952	chr11:47137695-47155952	0	+	47137695	47137695	8553170	3	34,86,357,	0,17480,17900,
#Deleted in new
chr11	47154394	47157979	chr11:47154394-47157979	0	+	47154394	47154394	8553170	4	77,86,196,167,	0,781,2628,3418,
#Partially deleted in new
chr11	47154943	47161508	chr11:47154943-47161508	0	+	47154943	47154943	8553170	6	41,86,196,110,64,45,	0,232,2079,2869,6183,6520,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	47160104	47162245	chr11:47160104-47162245	0	+	47160104	47160104	8553170	1	2141,	0,
#Partially deleted in new
chr11	47164298	47177125	chr11:47164298-47177125	1	-	47165481	47176853	789624	15	1204,119,94,127,135,129,132,137,53,57,82,132,73,119,344,	0,1969,2207,2461,3610,3824,7127,7365,7982,9127,9460,10883,11552,12217,12483,
#Partially deleted in new
chr11	47164298	47177125	chr11:47164298-47177125	1	-	47165481	47176853	789624	11	1204,119,94,127,135,129,132,137,73,119,344,	0,1969,2207,2461,3610,3824,7127,7365,11552,12217,12483,
#Partially deleted in new
chr11	47164300	47177082	chr11:47164300-47177082	3	-	47165481	47176853	0	16	1202,119,94,127,135,129,132,137,53,57,82,84,132,73,119,301,	0,1967,2205,2459,3608,3822,7125,7363,7980,9125,9458,10714,10881,11550,12215,12481,
#Partially deleted in new
chr11	47165214	47176859	chr11:47165214-47176859	0	-	47165214	47165214	8553170	16	288,119,94,127,68,129,132,137,53,57,82,84,132,73,119,78,	0,1053,1291,1545,2761,2908,6211,6449,7066,8211,8544,9800,9967,10636,11301,11567,
#Partially deleted in new
chr11	47165280	47177125	chr11:47165280-47177125	0	-	47171778	47176853	789624	10	222,119,94,127,135,129,132,137,119,344,	0,987,1225,1479,2628,2842,6145,6383,11235,11501,
#Partially deleted in new
chr11	47166267	47171557	chr11:47166267-47171557	0	-	47166267	47171557	789624	6	119,94,127,135,129,105,	0,238,492,1641,1855,5185,
#Partially deleted in new
chr11	47166584	47176859	chr11:47166584-47176859	0	-	47166584	47176853	789624	5	15,127,135,119,78,	0,175,1324,9931,10197,
#Partially deleted in new
chr11	47166860	47176880	chr11:47166860-47176880	0	-	47166860	47176853	789624	8	26,135,129,132,137,73,119,99,	0,1048,1262,4565,4803,8990,9655,9921,
#Partially deleted in new
chr11	47167908	47176846	chr11:47167908-47176846	0	-	47172327	47176846	789624	9	135,129,132,137,53,84,132,73,65,	0,214,3517,3755,4372,7106,7273,7942,8873,
#Deleted in new
chr11	47167973	47168503	chr11:47167973-47168503	0	-	47167973	47167973	8553170	2	70,381,	0,149,
#Partially deleted in new
chr11	47168123	47176879	chr11:47168123-47176879	0	-	47172327	47176853	789624	7	128,132,137,53,73,119,98,	0,3302,3540,4157,7727,8392,8658,
#Partially deleted in new
chr11	47168127	47176851	chr11:47168127-47176851	0	-	47172327	47176851	789624	8	124,132,137,53,132,73,119,70,	0,3298,3536,4153,7054,7723,8388,8654,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	47168280	47169563	chr11:47168280-47169563	3	-	47168280	47168280	8553170	2	306,268,	0,1015,
#Partially deleted in new
chr11	47171425	47176870	chr11:47171425-47176870	0	-	47171425	47176853	789624	10	132,137,53,57,124,84,132,73,119,89,	0,238,855,2000,2333,3589,3756,4425,5090,5356,
#Deleted in new
chr11	47171524	47172186	chr11:47171524-47172186	0	-	47171524	47171524	8553170	2	33,523,	0,139,
#Partially deleted in new
chr11	47171711	47176880	chr11:47171711-47176880	0	-	47171711	47171711	8553170	7	89,53,84,132,73,119,99,	0,569,3303,3470,4139,4804,5070,
#Partially deleted in new
chr11	47171758	47176882	chr11:47171758-47176882	0	-	47171758	47176853	789624	10	42,53,42,57,82,84,132,73,119,101,	0,522,951,1667,2000,3256,3423,4092,4757,5023,
#Partially deleted in new
chr11	47171778	47176853	chr11:47171778-47176853	1	-	47171778	47176853	789624	3	22,119,72,	0,4737,5003,
#Partially deleted in new
chr11	47172025	47176868	chr11:47172025-47176868	0	-	47172025	47172025	8553170	8	308,57,82,84,132,73,119,87,	0,1400,1733,2989,3156,3825,4490,4756,
#Partially deleted in new
chr11	47172311	47176867	chr11:47172311-47176867	0	-	47172311	47176853	789624	8	22,57,157,84,132,73,119,86,	0,1114,1447,2703,2870,3539,4204,4470,
#Partially deleted in new
chr11	47173097	47176859	chr11:47173097-47176859	0	-	47173097	47173097	8553170	7	385,124,84,132,73,119,78,	0,661,1917,2084,2753,3418,3684,
#Partially deleted in new
chr11	47173433	47176879	chr11:47173433-47176879	0	-	47173433	47173433	8553170	6	49,84,132,73,119,98,	0,1581,1748,2417,3082,3348,
#Partially deleted in new
chr11	47173461	47176879	chr11:47173461-47176879	0	-	47175088	47176853	789624	6	21,124,84,132,119,98,	0,297,1553,1720,3054,3320,
#Partially deleted in new
chr11	47173758	47176784	chr11:47173758-47176784	0	-	47176733	47176784	789624	4	82,132,73,269,	0,1423,2092,2757,
#Partially deleted in new
chr11	47173780	47176868	chr11:47173780-47176868	0	-	47173780	47176853	789624	6	60,84,132,52,119,87,	0,1234,1401,2091,2735,3001,
#Partially deleted in new
chr11	47173855	47176847	chr11:47173855-47176847	0	-	47173855	47173855	8553170	6	103,84,132,73,119,66,	0,1159,1326,1995,2660,2926,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	47174406	47176868	chr11:47174406-47176868	0	-	47174406	47174406	8553170	3	1517,119,87,	0,2109,2375,
#Deleted in new
chr11	47175025	47176787	chr11:47175025-47176787	0	-	47176733	47176787	789624	4	73,132,73,272,	0,156,825,1490,
#Deleted in new
chr11	47175060	47176867	chr11:47175060-47176867	0	-	47175392	47176853	789624	5	38,232,73,119,86,	0,121,790,1455,1721,
#Deleted in new
chr11	47175153	47176880	chr11:47175153-47176880	0	-	47175153	47175153	8553170	4	160,73,119,99,	0,697,1362,1628,
#Deleted in new
chr11	47176213	47176879	chr11:47176213-47176879	0	-	47176213	47176213	8553170	2	421,98,	0,568,
#Partially deleted in new
chr11	47177524	47186407	chr11:47177524-47186407	3	-	47177930	47182727	789624	11	522,122,137,121,176,156,236,157,91,66,59,	0,841,1369,1634,1886,2661,2930,4878,5149,5479,8824,
#Partially deleted in new
chr11	47177539	47185881	chr11:47177539-47185881	1	-	47177930	47182727	789624	11	507,122,137,121,176,156,236,157,91,66,240,	0,826,1354,1619,1871,2646,2915,4863,5134,5464,8102,
#Partially deleted in new
chr11	47177556	47186440	chr11:47177556-47186440	0	-	47178968	47182727	789624	11	490,122,134,125,176,156,236,157,91,66,92,	0,809,1337,1598,1854,2629,2898,4846,5117,5447,8792,
#Deleted in new
chr11	47177807	47179225	chr11:47177807-47179225	0	-	47178021	47179225	789624	3	239,137,67,	0,1086,1351,
#Partially deleted in new
chr11	47177988	47185881	chr11:47177988-47185881	0	-	47177988	47182727	789624	11	58,122,137,121,176,156,236,157,91,66,240,	0,377,905,1170,1422,2197,2466,4414,4685,5015,7653,
#Partially deleted in new
chr11	47179253	47186443	chr11:47179253-47186443	0	-	47179253	47179529	789624	7	26,176,156,236,157,66,95,	0,157,932,1201,3149,3750,7095,
#Partially deleted in new
chr11	47179421	47186436	chr11:47179421-47186436	0	-	47179421	47179529	789624	6	165,156,236,157,62,88,	0,764,1033,2981,3582,6927,
#Deleted in new
chr11	47179610	47179737	chr11:47179610-47179737	3	-	47179610	47179610	5263520	1	127,	0,
#Partially deleted in new
chr11	47180456	47186409	chr11:47180456-47186409	0	-	47180456	47182727	789624	5	234,157,136,66,61,	0,1946,2217,2547,5892,
#Partially deleted in new
chr11	47180475	47185419	chr11:47180475-47185419	0	-	47180475	47182727	789624	5	215,157,91,66,154,	0,1927,2198,2528,4790,
#Partially deleted in new
chr11	47182405	47186413	chr11:47182405-47186413	0	-	47182405	47182727	789624	5	154,91,66,178,65,	0,268,598,1914,3943,
#Deleted in new
chr11	47182405	47183321	chr11:47182405-47183321	0	-	47182405	47182727	789624	3	154,91,318,	0,268,598,
#Deleted in new
chr11	47191180	47191542	chr11:47191180-47191542	7	-	47191180	47191180	16724991	1	362,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	47214464	47216873	chr11:47214464-47216873	0	+	47215136	47216873	789624	4	210,193,137,16,	0,606,1871,2393,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	47214569	47234653	chr11:47214569-47234653	0	+	47215136	47234653	789624	6	105,191,137,192,146,81,	0,503,1766,2288,18244,20003,
#Partially deleted in new
chr11	47214941	47239240	chr11:47214941-47239240	3	+	47215136	47238849	0	10	322,137,192,146,100,178,143,165,46,441,	0,1394,1916,17872,19631,19815,20328,22895,23196,23858,
#Partially deleted in new
chr11	47214991	47239189	chr11:47214991-47239189	0	+	47215136	47235302	0	9	272,137,192,146,100,143,165,46,390,	0,1344,1866,17822,19581,20278,22845,23146,23808,
#Partially deleted in new
chr11	47215044	47232836	chr11:47215044-47232836	0	+	47215136	47232836	789624	4	228,137,192,23,	0,1291,1813,17769,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	47215057	47217411	chr11:47215057-47217411	0	+	47215057	47215057	8553170	3	206,137,554,	0,1278,1800,
#Partially deleted in new
chr11	47215087	47232959	chr11:47215087-47232959	0	+	47215136	47216342	789624	4	176,279,192,146,	0,1106,1770,17726,
#Partially deleted in new
chr11	47215094	47239217	chr11:47215094-47239217	0	+	47215094	47215094	8553170	8	1378,192,146,100,656,165,46,418,	0,1763,17719,19478,19662,22742,23043,23705,
#Partially deleted in new
chr11	47215111	47239216	chr11:47215111-47239216	0	+	47215111	47215111	8553170	5	1361,192,165,46,417,	0,1746,22725,23026,23688,
#Partially deleted in new
chr11	47215136	47238849	chr11:47215136-47238849	1	+	47215136	47238849	0	6	127,137,192,165,46,50,	0,1199,1721,22700,23001,23663,
#Partially deleted in new
chr11	47215136	47238849	chr11:47215136-47238849	1	+	47215136	47238849	0	9	127,137,146,100,178,143,165,46,50,	0,1199,17677,19436,19620,20133,22700,23001,23663,
#Partially deleted in new
chr11	47215136	47238849	chr11:47215136-47238849	0	+	47215136	47234587	0	8	127,137,192,100,143,165,46,50,	0,1199,1721,19436,20133,22700,23001,23663,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	47220217	47221751	chr11:47220217-47221751	3	-	47220217	47220217	8553170	2	548,62,	0,1472,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	47234580	47236087	chr11:47234580-47236087	0	+	47234580	47234580	8553170	3	92,178,818,	0,176,689,
#Partially deleted in new
chr11	47237805	47239217	chr11:47237805-47239217	0	+	47237805	47237805	8553170	3	196,46,418,	0,332,994,
#Partially deleted in new
chr11	47239301	47248906	chr11:47239301-47248906	3	-	47240115	47248789	789624	11	948,176,107,83,133,90,99,153,87,96,231,	0,3421,3716,3937,5433,6003,6172,6380,8339,8736,9374,
#Partially deleted in new
chr11	47239308	47245576	chr11:47239308-47245576	0	-	47239308	47239308	8553170	3	81,90,103,	0,5996,6165,
#Partially deleted in new
chr11	47239492	47248802	chr11:47239492-47248802	1	-	47240115	47248789	789624	9	757,176,107,83,133,153,87,96,127,	0,3230,3525,3746,5242,6189,8148,8545,9183,
#Partially deleted in new
chr11	47239554	47248816	chr11:47239554-47248816	0	-	47239554	47239554	8553170	10	695,176,107,83,133,90,99,153,493,141,	0,3168,3463,3684,5180,5750,5919,6127,8086,9121,
#Partially deleted in new
chr11	47239822	47248819	chr11:47239822-47248819	1	-	47240115	47248789	789624	10	427,176,107,83,133,90,99,153,87,144,	0,2900,3195,3416,4912,5482,5651,5859,7818,8853,
#Partially deleted in new
chr11	47239884	47248814	chr11:47239884-47248814	0	-	47245416	47248789	789624	10	365,176,107,83,133,118,153,87,96,139,	0,2838,3133,3354,4850,5420,5797,7756,8153,8791,
#Partially deleted in new
chr11	47240051	47248628	chr11:47240051-47248628	1	-	47240115	47248514	789624	11	198,176,107,83,133,90,99,153,87,96,144,	0,2671,2966,3187,4683,5253,5422,5630,7589,7986,8433,
#Partially deleted in new
chr11	47240085	47244960	chr11:47240085-47244960	0	-	47240085	47240085	8553170	5	164,176,107,83,226,	0,2637,2932,3153,4649,
#Partially deleted in new
chr11	47242839	47248814	chr11:47242839-47248814	0	-	47245394	47248789	789624	9	59,107,83,133,123,153,87,96,139,	0,178,399,1895,2465,2842,4801,5198,5836,
#Partially deleted in new
chr11	47242845	47248840	chr11:47242845-47248840	0	-	47242845	47248789	789624	9	53,107,83,133,90,153,87,96,165,	0,172,393,1889,2459,2836,4795,5192,5830,
#Partially deleted in new
chr11	47243238	47245378	chr11:47243238-47245378	0	-	47243238	47243238	8553170	2	83,644,	0,1496,
#Partially deleted in new
chr11	47244898	47248805	chr11:47244898-47248805	1	-	47245219	47248789	789624	5	360,153,87,96,130,	0,783,2742,3139,3777,
#Partially deleted in new
chr11	47245518	47248816	chr11:47245518-47248816	0	-	47245518	47245518	8553170	4	316,87,96,141,	0,2122,2519,3157,
#Deleted in new
chr11	47247392	47248814	chr11:47247392-47248814	0	-	47247392	47247392	8553170	3	335,96,139,	0,645,1283,
#Partially deleted in new
chr11	47248299	47260506	chr11:47248299-47260506	0	+	47248299	47248299	8553170	4	56,226,189,98,	0,339,11491,12109,
#Partially deleted in new
chr11	47248299	47261974	chr11:47248299-47261974	0	+	47248299	47248299	8553170	7	56,226,189,267,209,180,56,	0,339,11491,12109,12941,13247,13619,
#Partially deleted in new
chr11	47248299	47269032	chr11:47248299-47269032	1	+	47248803	47268696	789624	10	56,226,189,267,209,180,100,114,95,483,	0,339,11491,12109,12941,13247,13619,19613,19961,20250,
#Partially deleted in new
chr11	47248310	47268838	chr11:47248310-47268838	0	+	47248310	47248310	8553170	10	45,185,189,267,209,180,100,114,95,289,	0,369,11480,12098,12930,13236,13608,19602,19950,20239,
#Partially deleted in new
chr11	47248915	47268812	chr11:47248915-47268812	1	+	47259882	47268696	0	9	84,189,267,209,180,100,114,95,263,	0,10875,11493,12325,12631,13003,18997,19345,19634,
#Partially deleted in new
chr11	47248915	47268843	chr11:47248915-47268843	1	+	47259882	47268696	789624	8	84,189,267,209,100,114,95,294,	0,10875,11493,12325,13003,18997,19345,19634,
#Partially deleted in new
chr11	47248923	47268831	chr11:47248923-47268831	0	+	47248923	47248923	8553170	8	76,189,267,209,472,114,95,282,	0,10867,11485,12317,12623,18989,19337,19626,
#Partially deleted in new
chr11	47248923	47268831	chr11:47248923-47268831	1	+	47259882	47268696	789624	8	76,189,267,209,472,114,95,282,	0,10867,11485,12317,12623,18989,19337,19626,
#Partially deleted in new
chr11	47248926	47261347	chr11:47248926-47261347	0	+	47259216	47261347	789624	6	73,86,80,189,267,107,	0,1539,10253,10864,11482,12314,
#Partially deleted in new
chr11	47248926	47262019	chr11:47248926-47262019	0	+	47248926	47248926	8553170	2	73,779,	0,12314,
#Partially deleted in new
chr11	47248926	47268008	chr11:47248926-47268008	0	+	47259882	47268008	789624	5	73,189,209,100,96,	0,10864,12314,12992,18986,
#Partially deleted in new
chr11	47248926	47268816	chr11:47248926-47268816	0	+	47248926	47248926	8553170	4	73,114,95,267,	0,18986,19334,19623,
#Partially deleted in new
chr11	47248955	47268781	chr11:47248955-47268781	3	+	47259216	47268696	0	9	44,80,189,267,209,100,114,95,232,	0,10224,10835,11453,12285,12963,18957,19305,19594,
#Partially deleted in new
chr11	47257603	47261322	chr11:47257603-47261322	0	+	47259216	47261322	789624	6	32,134,80,189,267,82,	0,392,1576,2187,2805,3637,
#Partially deleted in new
chr11	47257622	47259979	chr11:47257622-47259979	0	+	47259216	47259979	789624	4	113,170,80,189,	0,373,1557,2168,
#Partially deleted in new
chr11	47257657	47261280	chr11:47257657-47261280	0	+	47259882	47261280	789624	4	78,189,267,40,	0,2133,2751,3583,
#Partially deleted in new
chr11	47257696	47261356	chr11:47257696-47261356	0	+	47259216	47261356	789624	6	39,134,80,189,267,116,	0,299,1483,2094,2712,3544,
#Deleted in new
chr11	47257707	47258506	chr11:47257707-47258506	0	+	47257707	47257707	8553170	2	28,511,	0,288,
#Partially deleted in new
chr11	47257709	47259823	chr11:47257709-47259823	0	+	47259216	47259482	789624	5	26,170,80,246,33,	0,286,1470,1651,2081,
#Partially deleted in new
chr11	47257916	47261280	chr11:47257916-47261280	0	+	47257916	47257916	8553170	5	213,159,189,125,40,	0,1184,1874,2634,3324,
#Partially deleted in new
chr11	47257961	47268784	chr11:47257961-47268784	1	+	47259216	47268696	0	10	168,80,189,267,209,180,100,114,95,235,	0,1218,1829,2447,3279,3585,3957,9951,10299,10588,
#Partially deleted in new
chr11	47257962	47259952	chr11:47257962-47259952	0	+	47259216	47259952	789624	3	203,75,162,	0,1222,1828,
#Partially deleted in new
chr11	47257969	47261421	chr11:47257969-47261421	0	+	47257969	47257969	8553170	4	160,80,189,181,	0,1210,1821,3271,
#Partially deleted in new
chr11	47257970	47261377	chr11:47257970-47261377	0	+	47259216	47261377	789624	5	159,159,189,267,137,	0,1130,1820,2438,3270,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	47257978	47268845	chr11:47257978-47268845	1	+	47259216	47268696	0	9	1281,189,267,209,180,100,114,95,296,	0,1812,2430,3262,3568,3940,9934,10282,10571,
#Partially deleted in new
chr11	47257995	47261345	chr11:47257995-47261345	0	+	47259216	47260516	789624	5	134,80,194,267,105,	0,1184,1790,2413,3245,
#Partially deleted in new
chr11	47257997	47268843	chr11:47257997-47268843	1	+	47259216	47268696	0	9	132,80,189,267,209,100,114,95,294,	0,1182,1793,2411,3243,3921,9915,10263,10552,
#Partially deleted in new
chr11	47258000	47260678	chr11:47258000-47260678	0	+	47258000	47258000	8553170	3	129,189,270,	0,1790,2408,
#Partially deleted in new
chr11	47258105	47260616	chr11:47258105-47260616	0	+	47258105	47258105	8553170	4	60,80,194,208,	0,1074,1680,2303,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	47258879	47259969	chr11:47258879-47259969	0	+	47258879	47258879	8553170	2	380,179,	0,911,
#Deleted in new
chr11	47259463	47260625	chr11:47259463-47260625	0	+	47259463	47259463	8553170	3	143,189,217,	0,327,945,
#Deleted in new
chr11	47259586	47260587	chr11:47259586-47260587	0	+	47259586	47259586	8553170	2	393,179,	0,822,
#Partially deleted in new
chr11	47260396	47268817	chr11:47260396-47268817	1	+	47260449	47268696	789624	6	279,209,100,114,95,268,	0,844,1522,7516,7864,8153,
#Deleted in new
chr11	47267944	47268844	chr11:47267944-47268844	0	+	47267944	47267944	8553170	2	411,295,	0,605,
#Deleted in new
chr11	47268140	47268844	chr11:47268140-47268844	0	+	47268140	47268140	8553170	2	215,295,	0,409,
#Partially deleted in new
chr11	47269160	47274726	chr11:47269160-47274726	0	+	47273914	47274726	789624	3	123,150,164,	0,4666,5402,
#Partially deleted in new
chr11	47269375	47330031	chr11:47269375-47330031	1	+	47273914	47329150	789624	33	269,150,597,304,132,114,81,179,236,157,104,191,254,140,102,103,187,151,207,101,84,159,109,121,106,111,108,165,73,107,70,47,986,	0,4451,5187,6523,7356,8789,9623,12199,13005,13437,14802,14999,15565,16075,17057,20015,20491,20773,21234,24507,26120,26521,39215,39905,40131,42356,45844,54295,54889,55095,57362,59282,59670,
#Partially deleted in new
chr11	47269671	47278198	chr11:47269671-47278198	0	+	47275905	47278198	789624	4	79,304,132,34,	0,6227,7060,8493,
#Partially deleted in new
chr11	47269673	47330031	chr11:47269673-47330031	3	+	47273914	47329150	789624	36	77,150,597,304,132,114,81,179,236,157,104,191,254,140,102,60,103,187,151,207,54,101,84,159,109,63,121,106,111,108,165,73,107,70,47,986,	0,4153,4889,6225,7058,8491,9325,11901,12707,13139,14504,14701,15267,15777,16759,19294,19717,20193,20475,20936,22869,24209,25822,26223,38917,39306,39607,39833,42058,45546,53997,54591,54797,57064,58984,59372,
#Partially deleted in new
chr11	47269673	47330031	chr11:47269673-47330031	1	+	47273914	47329150	789624	34	77,150,597,304,132,114,81,179,236,157,104,191,254,140,102,60,103,187,151,207,101,84,159,109,121,106,111,108,165,73,107,70,47,986,	0,4153,4889,6225,7058,8491,9325,11901,12707,13139,14504,14701,15267,15777,16759,19294,19717,20193,20475,20936,24209,25822,26223,38917,39607,39833,42058,45546,53997,54591,54797,57064,58984,59372,
#Partially deleted in new
chr11	47269673	47330031	chr11:47269673-47330031	1	+	47273914	47329150	789624	33	77,150,597,304,132,114,81,179,236,157,104,191,125,140,102,103,187,151,207,101,84,159,109,121,106,111,108,165,73,107,70,47,986,	0,4153,4889,6225,7058,8491,9325,11901,12707,13139,14504,14701,15267,15777,16759,19717,20193,20475,20936,24209,25822,26223,38917,39607,39833,42058,45546,53997,54591,54797,57064,58984,59372,
#Partially deleted in new
chr11	47269673	47330031	chr11:47269673-47330031	1	+	47273914	47328681	789624	32	77,150,597,304,132,114,81,179,236,157,104,191,125,140,102,103,187,151,207,101,84,159,109,121,106,111,108,165,73,107,47,986,	0,4153,4889,6225,7058,8491,9325,11901,12707,13139,14504,14701,15267,15777,16759,19717,20193,20475,20936,24209,25822,26223,38917,39607,39833,42058,45546,53997,54591,54797,58984,59372,
#Partially deleted in new
chr11	47269673	47330031	chr11:47269673-47330031	1	+	47273914	47329150	789624	34	77,150,597,304,132,114,81,179,236,157,104,191,125,140,102,60,103,187,151,207,101,84,159,109,121,106,111,108,165,73,107,70,47,986,	0,4153,4889,6225,7058,8491,9325,11901,12707,13139,14504,14701,15267,15777,16759,19294,19717,20193,20475,20936,24209,25822,26223,38917,39607,39833,42058,45546,53997,54591,54797,57064,58984,59372,
#Partially deleted in new
chr11	47269676	47274997	chr11:47269676-47274997	0	+	47269676	47269676	8553170	2	74,435,	0,4886,
#Partially deleted in new
chr11	47269683	47329357	chr11:47269683-47329357	1	+	47273914	47329150	789624	33	67,150,597,304,132,114,81,179,236,157,104,191,125,140,102,103,187,151,207,101,72,159,109,121,106,111,108,165,73,107,70,47,312,	0,4143,4879,6215,7048,8481,9315,11891,12697,13129,14494,14691,15257,15767,16749,19707,20183,20465,20926,24199,25812,26213,38907,39597,39823,42048,45536,53987,54581,54787,57054,58974,59362,
#Partially deleted in new
chr11	47269692	47274909	chr11:47269692-47274909	0	+	47273914	47274909	789624	3	214,150,347,	0,4134,4870,
#Partially deleted in new
chr11	47270147	47330031	chr11:47270147-47330031	1	+	47273914	47328681	789624	35	99,150,597,304,132,114,81,179,236,157,104,191,254,140,102,60,103,187,151,207,54,101,84,159,109,63,121,106,111,108,165,73,107,47,986,	0,3679,4415,5751,6584,8017,8851,11427,12233,12665,14030,14227,14793,15303,16285,18820,19243,19719,20001,20462,22395,23735,25348,25749,38443,38832,39133,39359,41584,45072,53523,54117,54323,58510,58898,
#Partially deleted in new
chr11	47270155	47330030	chr11:47270155-47330030	1	+	47273914	47329150	789624	33	91,150,597,304,132,114,81,179,236,157,104,191,254,140,102,103,187,151,207,101,81,159,109,121,106,111,108,165,73,107,70,47,985,	0,3671,4407,5743,6576,8009,8843,11419,12225,12657,14022,14219,14785,15295,16277,19235,19711,19993,20454,23727,25340,25741,38435,39125,39351,41576,45064,53515,54109,54315,56582,58502,58890,
#Partially deleted in new
chr11	47270155	47275005	chr11:47270155-47275005	0	+	47270155	47270155	8553170	2	91,443,	0,4407,
#Deleted in new
chr11	47270656	47272110	chr11:47270656-47272110	0	-	47270656	47270656	789624	3	324,63,35,	0,422,1419,
#Deleted in new
chr11	47270665	47272075	chr11:47270665-47272075	3	-	47270665	47270665	789624	3	315,63,114,	0,413,1296,
#Partially deleted in new
chr11	47272243	47274905	chr11:47272243-47274905	0	+	47273914	47274905	789624	3	87,150,343,	0,1583,2319,
#Partially deleted in new
chr11	47276027	47282595	chr11:47276027-47282595	0	+	47276027	47276027	8553170	6	175,159,114,81,179,215,	0,677,2137,2971,5547,6353,
#Partially deleted in new
chr11	47284945	47290069	chr11:47284945-47290069	0	+	47284945	47284945	8553170	4	120,140,103,203,	0,505,4445,4921,
#Partially deleted in new
chr11	47285270	47289921	chr11:47285270-47289921	0	+	47285270	47285270	8553170	4	320,102,103,55,	0,1162,4120,4596,
#Partially deleted in new
chr11	47292526	47325035	chr11:47292526-47325035	1	+	47295537	47324745	789624	13	70,101,72,159,109,63,121,106,111,108,165,73,565,	0,1356,2969,3370,16064,16453,16754,16980,19205,22693,31144,31738,31944,
#Partially deleted in new
chr11	47315305	47329210	chr11:47315305-47329210	0	+	47315305	47329150	789624	8	22,165,73,107,9,70,47,165,	0,8365,8959,9165,11238,11432,13352,13740,
#Deleted in new
chr11	47323670	47327186	chr11:47323670-47327186	0	+	47323670	47323670	8553170	4	165,73,107,449,	0,594,800,3067,
#Deleted in new
chr11	47323982	47324181	chr11:47323982-47324181	7	+	47323982	47323982	16724991	1	199,	0,
#Deleted in new
chr11	47324303	47325300	chr11:47324303-47325300	0	+	47324303	47324303	8553170	3	34,107,39,	0,167,958,
#Deleted in new
chr11	47328141	47329406	chr11:47328141-47329406	0	+	47328141	47328141	8553170	2	563,361,	0,904,
#Partially deleted in new
chr11	47331396	47352702	chr11:47331396-47352702	3	-	47331870	47352647	0	35	320,37,187,137,160,140,196,89,168,135,189,105,160,81,140,30,107,166,167,106,125,3,133,164,18,3,54,30,49,118,149,99,114,267,80,	0,448,675,1169,1417,1797,2160,2525,3645,4480,5994,6293,7123,7927,8254,9606,9741,10594,11181,11433,11624,11863,12095,14810,15230,15630,16029,16254,16460,17027,18377,18617,19105,19842,21226,
#Partially deleted in new
chr11	47331405	47352702	chr11:47331405-47352702	1	-	47331870	47352647	789624	33	311,37,187,137,160,140,196,89,168,135,189,105,160,81,140,30,107,166,167,106,128,133,164,21,54,30,49,118,149,99,114,267,80,	0,439,666,1160,1408,1788,2151,2516,3636,4471,5985,6284,7114,7918,8245,9597,9732,10585,11172,11424,11615,12086,14801,15221,16020,16245,16451,17018,18368,18608,19096,19833,21217,
#Partially deleted in new
chr11	47331405	47352702	chr11:47331405-47352702	1	-	47331870	47352647	789624	34	311,37,187,137,160,140,196,89,168,135,189,105,160,81,140,30,107,166,167,106,125,3,133,164,21,54,30,49,118,149,99,114,267,80,	0,439,666,1160,1408,1788,2151,2516,3636,4471,5985,6284,7114,7918,8245,9597,9732,10585,11172,11424,11615,11854,12086,14801,15221,16020,16245,16451,17018,18368,18608,19096,19833,21217,
#Partially deleted in new
chr11	47354859	47378576	chr11:47354859-47378576	3	-	47355226	47378353	789624	5	687,163,188,97,268,	0,3984,4993,20773,23449,
#Partially deleted in new
chr11	47354912	47378391	chr11:47354912-47378391	1	-	47355226	47378353	789624	5	634,163,188,100,83,	0,3931,4940,20720,23396,
#Partially deleted in new
chr11	47355100	47378523	chr11:47355100-47378523	1	-	47355483	47378353	789624	2	446,215,	0,23208,
#Partially deleted in new
chr11	47358180	47378487	chr11:47358180-47378487	1	-	47358598	47378353	789624	4	826,188,97,179,	0,1672,17452,20128,
#Partially deleted in new
chr11	47383147	47395640	chr11:47383147-47395640	0	-	47383147	47383147	8553170	2	685,151,	0,12342,
#Partially deleted in new
chr11	47383248	47409092	chr11:47383248-47409092	3	-	47383248	47383248	8553170	4	584,88,38,141,	0,12241,22261,25703,
#Partially deleted in new
chr11	47383543	47409190	chr11:47383543-47409190	0	-	47383543	47383543	8553170	3	289,38,239,	0,21966,25408,
#Deleted in new
chr11	47400969	47401042	chr11:47400969-47401042	3	+	47400969	47400969	5263520	1	73,	0,
#Partially deleted in new
chr11	47407131	47416495	chr11:47407131-47416495	1	+	47410094	47415122	789624	11	402,309,114,122,108,90,51,129,100,209,171,	0,2955,4794,5214,6268,6465,7293,7645,7928,8156,9193,
#Partially deleted in new
chr11	47408583	47412393	chr11:47408583-47412393	1	+	47410094	47412047	789624	3	79,309,468,	0,1503,3342,
#Partially deleted in new
chr11	47408604	47413778	chr11:47408604-47413778	0	+	47410094	47413713	789624	5	58,309,114,122,182,	0,1482,3321,3741,4992,
#Partially deleted in new
chr11	47408627	47414901	chr11:47408627-47414901	0	+	47410094	47414874	789624	7	35,309,114,122,90,51,125,	0,1459,3298,3718,4969,5797,6149,
#Partially deleted in new
chr11	47408628	47416501	chr11:47408628-47416501	1	+	47410094	47415363	789624	10	34,309,114,122,108,90,51,133,121,1214,	0,1458,3297,3717,4771,4968,5796,6148,6410,6659,
#Partially deleted in new
chr11	47408630	47416496	chr11:47408630-47416496	3	+	47410094	47415363	789624	10	32,330,114,122,108,90,51,133,100,1209,	0,1435,3295,3715,4769,4966,5794,6146,6429,6657,
#Partially deleted in new
chr11	47409590	47413697	chr11:47409590-47413697	0	+	47410094	47413697	789624	6	73,309,114,122,108,101,	0,496,2335,2755,3809,4006,
#Partially deleted in new
chr11	47409820	47412039	chr11:47409820-47412039	0	+	47410094	47412039	789624	3	145,309,114,	0,266,2105,
#Partially deleted in new
chr11	47410084	47416494	chr11:47410084-47416494	1	+	47410094	47413917	789624	5	311,114,122,108,2898,	0,1841,2261,3315,3512,
#Partially deleted in new
chr11	47412301	47413880	chr11:47412301-47413880	0	+	47412301	47412301	8553170	3	166,108,284,	0,1098,1295,
#Deleted in new
chr11	47414295	47415095	chr11:47414295-47415095	0	+	47414295	47414295	8553170	2	180,319,	0,481,
#Deleted in new
chr11	47414436	47415416	chr11:47414436-47415416	0	+	47414436	47414436	8553170	3	39,133,357,	0,340,623,
#Deleted in new
chr11	47414861	47415434	chr11:47414861-47415434	0	+	47414861	47414861	8553170	2	298,147,	0,426,
#Partially deleted in new
chr11	47418768	47426437	chr11:47418768-47426437	1	-	47418834	47426279	0	12	177,82,146,97,149,144,138,63,105,126,84,233,	0,347,1495,1862,3805,4061,5277,5660,5838,6352,7098,7436,
#Partially deleted in new
chr11	47418768	47426266	chr11:47418768-47426266	1	-	47418834	47426231	789624	12	177,82,146,97,149,144,138,63,105,126,84,62,	0,347,1495,1862,3805,4061,5277,5660,5838,6352,7098,7436,
#Partially deleted in new
chr11	47418768	47426473	chr11:47418768-47426473	3	-	47418834	47426279	0	12	177,82,146,97,149,144,138,63,105,126,84,269,	0,347,1495,1862,3805,4061,5277,5660,5838,6352,7098,7436,
#Partially deleted in new
chr11	47418801	47426442	chr11:47418801-47426442	1	-	47418834	47426279	789624	11	144,82,146,97,149,144,138,63,105,84,238,	0,314,1462,1829,3772,4028,5244,5627,5805,7065,7403,
#Partially deleted in new
chr11	47420338	47426225	chr11:47420338-47426225	0	-	47420338	47426225	789624	10	71,97,149,144,75,63,105,126,84,21,	0,292,2235,2491,3770,4090,4268,4782,5528,5866,
#Partially deleted in new
chr11	47422573	47426216	chr11:47422573-47426216	0	-	47422573	47426216	789624	8	149,144,138,63,105,126,80,100,	0,256,1472,1855,2033,2547,3293,3543,
#Partially deleted in new
chr11	47422573	47426198	chr11:47422573-47426198	0	-	47425873	47426198	789624	8	149,144,138,63,105,126,84,82,	0,256,1472,1855,2033,2547,3293,3543,
#Partially deleted in new
chr11	47422573	47426235	chr11:47422573-47426235	0	-	47422573	47426231	789624	7	149,144,138,105,126,84,31,	0,256,1472,2033,2547,3293,3631,
#Partially deleted in new
chr11	47422932	47426255	chr11:47422932-47426255	0	-	47425239	47426231	789624	7	41,138,63,105,126,80,51,	0,1113,1496,1674,2188,2934,3272,
#Partially deleted in new
chr11	47424107	47426258	chr11:47424107-47426258	0	-	47424107	47426231	789624	6	76,63,105,126,84,126,	0,321,499,1013,1759,2025,
#Partially deleted in new
chr11	47424363	47426259	chr11:47424363-47426259	0	-	47424363	47424363	8553170	5	128,105,126,84,55,	0,243,757,1503,1841,
#Partially deleted in new
chr11	47424422	47426251	chr11:47424422-47426251	0	-	47424422	47424422	8553170	4	289,126,84,47,	0,698,1444,1782,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	47425438	47426255	chr11:47425438-47426255	0	-	47425438	47425438	8553170	2	512,51,	0,766,
#Partially deleted in new
chr11	47437756	47449178	chr11:47437756-47449178	3	-	47437974	47448964	789624	8	291,200,54,123,99,159,339,406,	0,975,3402,3854,4066,4899,10055,11016,
#Partially deleted in new
chr11	47437763	47449143	chr11:47437763-47449143	1	-	47437974	47448964	789624	6	284,200,99,159,339,371,	0,968,4059,4892,10048,11009,
#Partially deleted in new
chr11	47437763	47441731	chr11:47437763-47441731	0	-	47437763	47437763	8553170	2	284,121,	0,3847,
#Partially deleted in new
chr11	47437764	47449136	chr11:47437764-47449136	1	-	47437974	47448964	789624	7	283,200,54,123,99,339,364,	0,967,3394,3846,4058,10047,11008,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	47438484	47449136	chr11:47438484-47449136	1	-	47438658	47448964	789624	5	447,99,159,339,364,	0,3338,4171,9327,10288,
#Partially deleted in new
chr11	47465932	47553117	chr11:47465932-47553117	1	-	47472229	47489014	0	14	2959,167,144,186,111,129,64,162,80,135,49,83,188,126,	0,6258,7155,9403,10913,11364,12944,16762,17520,18456,20817,21226,22904,87059,
#Partially deleted in new
chr11	47465943	47489024	chr11:47465943-47489024	1	-	47472229	47489014	0	13	6159,167,144,186,111,129,76,162,80,132,49,83,188,	0,6247,7144,9392,10902,11353,12933,16751,17509,18445,20806,21215,22893,
#Partially deleted in new
chr11	47468283	47489014	chr11:47468283-47489014	3	-	47472229	47489014	0	13	608,167,144,186,111,129,76,162,80,135,49,83,178,	0,3907,4804,7052,8562,9013,10593,14411,15169,16105,18466,18875,20553,
#Partially deleted in new
chr11	47468392	47494521	chr11:47468392-47494521	1	-	47472229	47489014	0	14	499,167,144,186,114,129,64,162,80,135,49,83,188,191,	0,3798,4695,6943,8453,8904,10484,14302,15060,15996,18357,18766,20444,25938,
#Partially deleted in new
chr11	47468813	47489025	chr11:47468813-47489025	1	-	47472229	47489014	0	13	78,167,144,186,114,129,64,162,80,135,49,83,189,	0,3377,4274,6522,8032,8483,10063,13881,14639,15575,17936,18345,20023,
#Partially deleted in new
chr11	47470293	47475457	chr11:47470293-47475457	0	-	47470293	47470293	8553170	5	262,105,167,144,122,	0,1704,1897,2794,5042,
#Partially deleted in new
chr11	47470315	47553117	chr11:47470315-47553117	1	-	47472229	47499523	789624	16	1787,167,144,186,114,129,76,162,80,135,49,83,188,152,72,126,	0,1875,2772,5020,6530,6981,8561,12379,13137,14073,16434,16843,18521,29137,30545,82676,
#Partially deleted in new
chr11	47470317	47523988	chr11:47470317-47523988	1	-	47472229	47499523	0	16	572,167,144,186,111,129,76,162,80,132,49,83,188,152,72,741,	0,1873,2770,5018,6528,6979,8559,12377,13135,14071,16432,16841,18519,29135,30543,52930,
#Deleted in new
chr11	47470328	47472356	chr11:47470328-47472356	0	-	47470328	47470328	8553170	2	227,166,	0,1862,
#Partially deleted in new
chr11	47472330	47477060	chr11:47472330-47477060	0	-	47472330	47472330	8553170	4	27,144,186,215,	0,757,3005,4515,
#Partially deleted in new
chr11	47475455	47477683	chr11:47475455-47477683	0	-	47475455	47475455	8553170	3	66,114,387,	0,1390,1841,
#Partially deleted in new
chr11	47477295	47486799	chr11:47477295-47486799	0	-	47477295	47477295	8553170	5	130,76,162,135,50,	0,1581,5399,7093,9454,
#Partially deleted in new
chr11	47482441	47483510	chr11:47482441-47483510	0	-	47482441	47482441	8553170	2	415,58,	0,1011,
#Partially deleted in new
chr11	47486773	47565520	chr11:47486773-47565520	0	-	47486773	47489014	789624	5	25,83,188,40,247,	0,385,2063,20084,78500,
#Partially deleted in new
chr11	47487158	47523647	chr11:47487158-47523647	0	-	47487158	47499523	789624	5	83,188,152,72,48,	0,1678,12294,13702,36441,
#Partially deleted in new
chr11	47487183	47524781	chr11:47487183-47524781	0	-	47487183	47489014	789624	4	58,188,72,258,	0,1653,13677,37340,
#Partially deleted in new
chr11	47487191	47499763	chr11:47487191-47499763	0	-	47487191	47499523	789624	3	50,188,311,	0,1645,12261,
#Partially deleted in new
chr11	47488844	47565569	chr11:47488844-47565569	0	-	47488844	47489014	789624	2	180,296,	0,76429,
#Partially deleted in new
chr11	47488971	47524674	chr11:47488971-47524674	0	-	47488971	47489014	789624	6	53,113,152,72,40,151,	0,5359,10481,11889,17886,35552,
#Partially deleted in new
chr11	47488982	47523537	chr11:47488982-47523537	0	-	47488982	47499523	789624	4	42,152,72,290,	0,10470,11878,34265,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	47513604	47514889	chr11:47513604-47514889	3	-	47513604	47513604	8553170	2	390,40,	0,1245,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	47557533	47557833	chr11:47557533-47557833	3	-	47557533	47557533	8553170	1	300,	0,
#Partially deleted in new
chr11	47565335	47584561	chr11:47565335-47584561	0	+	47565335	47565335	8553170	7	461,81,273,460,126,120,248,	0,570,6135,15189,16752,17013,18978,
#Partially deleted in new
chr11	47565429	47571927	chr11:47565429-47571927	1	+	47565622	47571562	789624	2	557,457,	0,6041,
#Partially deleted in new
chr11	47565457	47572360	chr11:47565457-47572360	1	+	47565622	47569842	789624	3	529,192,890,	0,4242,6013,
#Partially deleted in new
chr11	47565598	47572119	chr11:47565598-47572119	1	+	47565622	47571629	789624	3	198,81,649,	0,307,5872,
#Partially deleted in new
chr11	47565600	47571769	chr11:47565600-47571769	3	+	47565622	47571629	789624	4	196,81,192,299,	0,305,4099,5870,
#Partially deleted in new
chr11	47565897	47573461	chr11:47565897-47573461	0	+	47565897	47565897	8553170	3	89,192,1991,	0,3802,5573,
#Partially deleted in new
chr11	47572196	47578956	chr11:47572196-47578956	1	-	47572929	47577999	0	4	1594,107,614,129,	0,3396,5214,6631,
#Partially deleted in new
chr11	47572197	47578969	chr11:47572197-47578969	3	-	47572929	47577999	0	4	1593,107,618,142,	0,3395,5213,6630,
#Partially deleted in new
chr11	47572197	47578789	chr11:47572197-47578789	1	-	47572929	47578074	789624	3	1593,107,1379,	0,3395,5213,
#Partially deleted in new
chr11	47572226	47579015	chr11:47572226-47579015	1	-	47572929	47578951	0	4	1564,107,618,83,	0,3366,5184,6706,
#Partially deleted in new
chr11	47575565	47578768	chr11:47575565-47578768	1	-	47575574	47578658	789624	3	134,618,228,	0,1845,2975,
#Partially deleted in new
chr11	47575631	47578973	chr11:47575631-47578973	0	-	47578000	47578951	789624	3	68,667,41,	0,1779,3301,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	47576470	47576588	chr11:47576470-47576588	3	-	47576470	47576470	8553170	1	118,	0,
#Deleted in new
chr11	47577403	47578939	chr11:47577403-47578939	0	-	47577403	47577999	789624	2	652,112,	0,1424,
#Deleted in new
chr11	47577516	47578768	chr11:47577516-47578768	0	-	47577516	47577999	789624	2	512,84,	0,1168,
#Deleted in new
chr11	47577522	47578947	chr11:47577522-47578947	0	-	47577522	47577999	789624	2	506,36,	0,1389,
#Deleted in new
chr11	47577553	47578976	chr11:47577553-47578976	0	-	47577553	47578951	789624	2	502,44,	0,1379,
#Deleted in new
chr11	47577724	47578277	chr11:47577724-47578277	3	+	47577724	47577724	8553170	1	553,	0,
#Partially deleted in new
chr11	47579009	47584562	chr11:47579009-47584562	3	+	47579091	47584481	0	7	149,66,98,150,126,120,249,	0,259,1515,1825,3078,3339,5304,
#Deleted in new
chr11	47579028	47579696	chr11:47579028-47579696	1	+	47579091	47579405	789624	2	130,428,	0,240,
#Deleted in new
chr11	47579071	47580902	chr11:47579071-47580902	0	+	47579091	47580902	789624	3	87,98,68,	0,1453,1763,
#Deleted in new
chr11	47579071	47580954	chr11:47579071-47580954	1	+	47579091	47580757	789624	3	87,66,430,	0,197,1453,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	47579073	47581848	chr11:47579073-47581848	1	+	47579091	47581002	0	4	85,66,98,1014,	0,195,1451,1761,
#Deleted in new
chr11	47579084	47580841	chr11:47579084-47580841	0	+	47579084	47579084	8553170	2	250,317,	0,1440,
#Partially deleted in new
chr11	47579098	47582471	chr11:47579098-47582471	0	+	47579098	47579098	8553170	5	236,98,150,126,123,	0,1426,1736,2989,3250,
#Deleted in new
chr11	47579267	47581111	chr11:47579267-47581111	0	+	47579267	47579267	8553170	3	67,79,277,	0,1257,1567,
#Partially deleted in new
chr11	47581768	47584527	chr11:47581768-47584527	0	+	47581768	47581768	8553170	3	445,120,214,	0,580,2545,
#Partially deleted in new
chr11	47582051	47584561	chr11:47582051-47584561	0	+	47582051	47582051	8553170	3	162,120,248,	0,297,2262,
#Partially deleted in new
chr11	47582241	47584355	chr11:47582241-47584355	0	+	47582241	47582241	8553170	2	227,42,	0,2072,
#Deleted in new
chr11	47586692	47589194	chr11:47586692-47589194	3	+	47586714	47588434	789624	3	161,71,1156,	0,1058,1346,
#Partially deleted in new
chr11	47589663	47594659	chr11:47589663-47594659	3	-	47589820	47590810	789624	2	1152,512,	0,4484,
#Deleted in new
chr11	47589821	47590810	chr11:47589821-47590810	0	-	47590510	47590810	789624	2	230,300,	0,689,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	47617314	47642452	chr11:47617314-47642452	0	-	47617314	47617314	8553170	6	225,63,27,107,85,74,	0,17357,18230,21384,21652,25064,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	47617315	47642623	chr11:47617315-47642623	3	-	47618832	47642465	789624	13	1604,76,68,48,94,60,52,58,63,27,107,85,245,	0,5385,8358,9764,11637,13239,13720,14338,17356,18229,21383,21651,25063,
#Partially deleted in new
chr11	47618703	47629355	chr11:47618703-47629355	0	-	47618703	47618703	8553170	5	216,76,68,48,403,	0,3997,6970,8376,10249,
#Partially deleted in new
chr11	47618838	47638791	chr11:47618838-47638791	0	-	47618838	47618838	8553170	9	81,76,68,48,94,60,52,27,93,	0,3862,6835,8241,10114,11716,12197,16706,19860,
#Partially deleted in new
chr11	47622710	47642607	chr11:47622710-47642607	0	-	47622710	47642465	789624	11	66,68,48,94,60,52,58,63,107,85,229,	0,2963,4369,6242,7844,8325,8943,11961,15988,16256,19668,
#Partially deleted in new
chr11	47631653	47642595	chr11:47631653-47642595	0	-	47631653	47631653	8553170	6	58,63,27,107,85,195,	0,3018,3891,7045,7313,10747,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr11	47659590	47715360	chr11:47659590-47715360	3	-	47660172	47714650	789624	19	756,87,108,126,67,131,101,127,157,783,154,108,186,114,54,135,64,133,186,	0,3435,7365,7980,9250,17680,20382,22378,26302,30485,32512,39855,44952,45930,46273,50786,54693,55027,55584,
#Partially deleted in new
chr11	47659590	47690370	chr11:47659590-47690370	0	-	47682010	47690370	789624	9	756,87,108,126,67,131,101,127,295,	0,3435,7365,7980,9250,17680,20382,22378,30485,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr11	47659592	47714650	chr11:47659592-47714650	1	-	47660172	47714650	789624	18	754,87,108,126,73,131,101,127,157,783,154,108,186,114,54,135,64,33,	0,3433,7363,7978,9248,17678,20380,22376,26300,30483,32510,39853,44950,45928,46271,50784,54691,55025,
#Partially deleted in new
chr11	47666614	47715369	chr11:47666614-47715369	1	-	47666814	47714650	789624	16	449,126,67,131,101,127,157,783,154,108,186,54,135,64,92,195,	0,956,2226,10656,13358,15354,19278,23461,25488,32831,37928,39249,43762,47669,48003,48560,
#Partially deleted in new
chr11	47668840	47715352	chr11:47668840-47715352	0	-	47668840	47668840	8553170	11	67,101,127,157,783,154,108,186,135,64,735,	0,11132,13128,17052,21235,23262,30605,35702,41536,45443,45777,
#Partially deleted in new
chr11	47690545	47715369	chr11:47690545-47715369	0	-	47690545	47714650	789624	8	313,154,108,186,135,64,133,195,	0,1557,8900,13997,19831,23738,24072,24629,
#Partially deleted in new
chr11	47692165	47710312	chr11:47692165-47710312	0	-	47692165	47692165	8553170	5	91,108,186,54,99,	0,7280,12377,13698,18048,
#Partially deleted in new
chr11	47699520	47714427	chr11:47699520-47714427	0	-	47699520	47714320	789624	5	33,186,54,135,144,	0,5022,6343,10856,14763,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	47705099	47710459	chr11:47705099-47710459	0	-	47705099	47705099	8553170	2	818,83,	0,5277,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	47705863	47714709	chr11:47705863-47714709	0	-	47710813	47714650	789624	5	54,135,205,64,92,	0,4513,4834,8420,8754,
#Partially deleted in new
chr11	47705863	47715382	chr11:47705863-47715382	0	-	47705863	47714650	789624	5	54,135,64,133,541,	0,4513,8420,8754,8978,
#Partially deleted in new
chr11	47710383	47715369	chr11:47710383-47715369	0	-	47710383	47710383	8553170	5	128,72,64,133,195,	0,3691,3900,4234,4791,
#Deleted in new
chr11	47714283	47715389	chr11:47714283-47715389	0	-	47714283	47714650	789624	3	64,133,282,	0,334,824,
#Deleted in new
chr11	47714312	47714887	chr11:47714312-47714887	0	-	47714312	47714312	8553170	2	35,270,	0,305,
#Partially deleted in new
chr11	47716516	47767301	chr11:47716516-47767301	3	-	47717421	47767288	789624	17	996,158,341,145,311,188,134,105,125,211,339,121,148,187,137,93,233,	0,3412,6459,7511,7951,14857,16020,17508,20099,27436,29539,34399,34626,36399,38011,48753,50552,
#Partially deleted in new
chr11	47717226	47724551	chr11:47717226-47724551	0	-	47717226	47717226	8553170	4	286,158,145,84,	0,2702,6801,7241,
#Partially deleted in new
chr11	47722975	47724900	chr11:47722975-47724900	0	-	47722975	47722975	8553170	3	341,145,433,	0,1052,1492,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	47722981	47726904	chr11:47722981-47726904	0	-	47722981	47722981	8553170	3	335,145,2437,	0,1046,1486,
#Partially deleted in new
chr11	47724471	47734135	chr11:47724471-47734135	0	-	47724471	47724471	8553170	5	307,100,188,134,111,	0,1265,6902,8065,9553,
#Partially deleted in new
chr11	47724503	47732258	chr11:47724503-47732258	0	-	47724503	47724503	8553170	3	275,188,142,	0,6870,7613,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	47726893	47726992	chr11:47726893-47726992	3	-	47726893	47726893	8553170	1	99,	0,
#Deleted in new
chr11	47729967	47731562	chr11:47729967-47731562	0	-	47729967	47729967	8553170	2	223,189,	0,1406,
#Deleted in new
chr11	47731283	47732182	chr11:47731283-47732182	0	-	47731283	47731283	8553170	2	278,66,	0,833,
#Deleted in new
chr11	47731832	47732397	chr11:47731832-47732397	0	-	47731832	47731832	8553170	2	200,281,	0,284,
#Partially deleted in new
chr11	47731832	47744015	chr11:47731832-47744015	0	-	47731832	47731832	8553170	5	387,134,105,125,63,	0,704,2192,4783,12120,
#Partially deleted in new
chr11	47731839	47767286	chr11:47731839-47767286	0	-	47731839	47731839	8553170	11	831,105,125,211,339,121,148,187,137,93,218,	0,2185,4776,12113,14216,19076,19303,21076,22688,33430,35229,
#Partially deleted in new
chr11	47732481	47744143	chr11:47732481-47744143	0	-	47732481	47732481	8553170	4	189,105,125,191,	0,1543,4134,11471,
#Partially deleted in new
chr11	47743816	47746199	chr11:47743816-47746199	0	-	47743816	47743816	8553170	2	347,144,	0,2239,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	47752719	47754616	chr11:47752719-47754616	0	-	47752719	47752719	8553170	2	383,89,	0,1808,
#Partially deleted in new
chr11	47752986	47767441	chr11:47752986-47767441	0	-	47752986	47767288	789624	3	116,93,373,	0,12283,14082,
#Partially deleted in new
chr11	47753037	47767443	chr11:47753037-47767443	0	-	47753037	47753037	8553170	3	65,137,375,	0,1490,14031,
#Partially deleted in new
chr11	47778086	47848467	chr11:47778086-47848467	3	-	47779104	47848420	0	36	1108,105,126,142,102,124,111,61,161,106,97,95,96,120,99,70,160,71,134,161,128,166,100,171,84,69,85,98,78,159,115,79,223,211,112,249,	0,2256,4986,6835,8366,10095,10414,13843,14699,19692,19891,20081,20281,23724,25351,26462,28066,28983,30309,33977,34215,34795,35229,37392,37859,39969,41287,43637,44000,57564,58800,59458,61756,62291,69761,70132,
#Partially deleted in new
chr11	47778236	47848313	chr11:47778236-47848313	0	-	47779104	47848313	789624	34	928,142,102,124,111,61,161,106,97,95,96,120,99,70,160,71,134,161,128,166,100,171,84,69,85,98,78,159,115,79,223,211,112,95,	0,6685,8216,9945,10264,13693,14549,19542,19741,19931,20131,23574,25201,26312,27916,28833,30159,33827,34065,34645,35079,37242,37709,39819,41137,43487,43850,57414,58650,59308,61606,62141,69611,69982,
#Partially deleted in new
chr11	47792011	47848334	chr11:47792011-47848334	0	-	47792779	47848334	789624	28	935,106,97,95,96,120,99,70,160,71,134,161,128,166,100,171,84,69,85,98,78,159,115,79,223,211,112,116,	0,5767,5966,6156,6356,9799,11426,12537,14141,15058,16384,20052,20290,20870,21304,23467,23934,26044,27362,29712,30075,43639,44875,45533,47831,48366,55836,56207,
#Partially deleted in new
chr11	47796168	47796379	chr11:47796168-47796379	7	+	47796168	47796168	16724991	1	211,	0,
#Partially deleted in new
chr11	47803436	47806515	chr11:47803436-47806515	0	-	47803436	47803436	8553170	3	100,70,363,	0,1112,2716,
#Partially deleted in new
chr11	47804295	47804402	chr11:47804295-47804402	7	-	47804295	47804295	16724991	1	107,	0,
#Partially deleted in new
chr11	47804353	47806240	chr11:47804353-47806240	0	-	47804353	47804353	8553170	2	265,88,	0,1799,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr11	47808482	47848330	chr11:47808482-47848330	0	-	47836995	47848330	789624	16	47,366,166,100,171,84,69,85,98,78,120,159,115,79,112,112,	0,3581,4399,4833,6996,7463,9573,10891,13241,13604,18592,27168,28404,29062,39365,39736,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	47815090	47816020	chr11:47815090-47816020	0	-	47815090	47815090	8553170	2	559,75,	0,855,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	47820199	47820289	chr11:47820199-47820289	3	-	47820199	47820199	8553170	1	90,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	47821375	47822167	chr11:47821375-47822167	0	-	47821375	47821375	8553170	2	446,81,	0,711,
#Partially deleted in new
chr11	47839500	47848555	chr11:47839500-47848555	1	-	47840227	47848420	0	3	1088,112,337,	0,8347,8718,
#Partially deleted in new
chr11	47839945	47848334	chr11:47839945-47848334	0	-	47839945	47839945	8553170	3	120,112,116,	0,7902,8273,
#Deleted in new
chr11	47841323	47841682	chr11:47841323-47841682	7	+	47841323	47841323	16724991	1	359,	0,
#Deleted in new
chr11	47905322	47905607	chr11:47905322-47905607	7	-	47905322	47905322	16724991	1	285,	0,
#Partially deleted in new
chr11	47980557	48170841	chr11:47980557-48170841	1	+	47980912	48167362	789624	25	451,19,237,264,258,219,264,258,258,279,291,132,211,125,88,40,12,90,91,74,135,120,161,136,3638,	0,129500,132189,140445,143055,144410,147222,149901,155481,156445,158928,162361,164117,164442,166318,168889,168933,169536,173238,175243,175427,179372,182900,183822,186646,
#Partially deleted in new
chr11	47980560	48168118	chr11:47980560-48168118	3	+	47980912	48167362	0	25	448,19,237,264,258,219,264,258,258,279,291,132,211,125,88,42,9,88,91,74,135,120,161,136,915,	0,129497,132186,140442,143052,144407,147219,149898,155478,156442,158925,162358,164114,164439,166315,168886,169429,169535,173235,175240,175424,179369,182897,183819,186643,
#Partially deleted in new
chr11	47980568	48167762	chr11:47980568-48167762	1	+	47980912	48167362	789624	26	440,19,237,264,258,219,264,258,258,279,291,132,212,9,127,88,40,12,90,91,74,135,120,161,136,559,	0,129489,132178,140434,143044,144399,147211,149890,155470,156434,158917,162350,164106,164321,164429,166307,168878,168922,169525,173227,175232,175416,179361,182889,183811,186635,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	47980579	48132720	chr11:47980579-48132720	1	+	47980912	48131515	0	9	429,19,237,264,258,219,264,258,1210,	0,129478,132167,140423,143033,144388,147200,149879,150931,
#Partially deleted in new
chr11	47980726	48123700	chr11:47980726-48123700	0	+	47980912	48123700	789624	4	282,19,237,88,	0,129331,132020,142886,
#Partially deleted in new
chr11	47980726	48121247	chr11:47980726-48121247	0	+	47980912	48121247	789624	3	282,19,245,	0,129331,140276,
#Partially deleted in new
chr11	48096781	48096858	chr11:48096781-48096858	3	+	48096781	48096781	5263520	1	77,	0,
#Partially deleted in new
chr11	48145077	48149866	chr11:48145077-48149866	0	+	48145077	48145077	8553170	3	47,88,420,	0,1798,4369,
#Deleted in new
chr11	48216809	48217739	chr11:48216809-48217739	3	+	48216809	48217739	789624	1	930,	0,
#Deleted in new
chr11	48227428	48228310	chr11:48227428-48228310	7	+	48227428	48227428	16724991	1	882,	0,
#Deleted in new
chr11	48245055	48246080	chr11:48245055-48246080	3	+	48245103	48246015	789624	1	1025,	0,
#Deleted in new
chr11	48263860	48264778	chr11:48263860-48264778	3	+	48263860	48264778	789624	1	918,	0,
#Partially deleted in new
chr11	48306222	48307152	chr11:48306222-48307152	3	+	48306222	48307152	789624	1	930,	0,
#Partially deleted in new
chr11	48324919	48325955	chr11:48324919-48325955	3	+	48325021	48325930	789624	1	1036,	0,
#Partially deleted in new
chr11	48324940	48325930	chr11:48324940-48325930	1	+	48324940	48325930	789624	1	990,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	48345350	48352447	chr11:48345350-48352447	7	-	48345350	48345350	16724991	2	601,330,	0,6767,
#Partially deleted in new
chr11	48365484	48366465	chr11:48365484-48366465	3	-	48365484	48366465	789624	1	981,	0,
#Deleted in new
chr11	48420209	48421273	chr11:48420209-48421273	7	+	48420209	48420209	16724991	1	1064,	0,
#Deleted in new
chr11	48432216	48433147	chr11:48432216-48433147	7	-	48432216	48432216	16724991	1	931,	0,
#Deleted in new
chr11	48464052	48464977	chr11:48464052-48464977	7	-	48464052	48464052	16724991	1	925,	0,
#Deleted in new
chr11	48486362	48486825	chr11:48486362-48486825	7	-	48486362	48486362	16724991	1	463,	0,
#Deleted in new
chr11	48488716	48489780	chr11:48488716-48489780	3	+	48488792	48489722	789624	1	1064,	0,
#Deleted in new
chr11	48492025	48492416	chr11:48492025-48492416	7	+	48492025	48492025	16724991	1	391,	0,
#Deleted in new
chr11	48496347	48497280	chr11:48496347-48497280	7	+	48496347	48496347	16724991	1	933,	0,
#Deleted in new
chr11	48512272	48513220	chr11:48512272-48513220	7	+	48512272	48512272	16724991	1	948,	0,
#Deleted in new
chr11	48526063	48526971	chr11:48526063-48526971	7	+	48526063	48526063	16724991	1	908,	0,
#Deleted in new
chr11	48579435	48580336	chr11:48579435-48580336	7	+	48579435	48579435	16724991	1	901,	0,
#Deleted in new
chr11	48589759	48590687	chr11:48589759-48590687	7	+	48589759	48589759	16724991	1	928,	0,
#Partially deleted in new
chr11	48610062	48611000	chr11:48610062-48611000	7	+	48610062	48610062	16724991	1	938,	0,
#Partially deleted in new
chr11	48627545	48628493	chr11:48627545-48628493	7	+	48627545	48627545	16724991	1	948,	0,
#Partially deleted in new
chr11	48880110	48885237	chr11:48880110-48885237	7	+	48880110	48880110	16724991	3	277,175,479,	0,2201,4648,
#Partially deleted in new
chr11	48881722	48902181	chr11:48881722-48902181	7	-	48881722	48881722	16724991	10	324,259,124,93,376,58,477,532,986,478,	0,435,3621,5357,6852,10925,13468,16111,18555,19981,
#Partially deleted in new
chr11	48893255	48898703	chr11:48893255-48898703	7	+	48893255	48893255	16724991	4	93,124,283,316,	0,1705,4732,5132,
#Partially deleted in new
chr11	48907102	48908946	chr11:48907102-48908946	7	+	48907102	48907102	16724991	2	96,659,	0,1185,
#Deleted in new
chr11	48945693	48951895	chr11:48945693-48951895	7	+	48945693	48945693	16724991	6	411,96,231,23,98,498,	0,694,2592,3545,4511,5704,
#Deleted in new
chr11	48959927	48961810	chr11:48959927-48961810	7	+	48959927	48959927	16724991	4	157,81,93,109,	0,295,1005,1774,
#Partially deleted in new
chr11	48975323	48983826	chr11:48975323-48983826	3	-	48975497	48981695	8553170	7	674,98,23,231,96,415,88,	0,1761,2814,3548,5582,5961,8415,
#Deleted in new
chr11	48975497	48981695	chr11:48975497-48981695	1	-	48975497	48981695	8553170	6	500,98,23,231,96,411,	0,1587,2640,3374,5408,5787,
#Deleted in new
chr11	48985867	48991881	chr11:48985867-48991881	7	-	48985867	48985867	16724991	6	499,98,23,231,96,411,	0,1588,2549,3273,5222,5603,
#Partially deleted in new
chr11	49009958	49012164	chr11:49009958-49012164	5	-	49009958	49009958	16724991	2	714,391,	0,1815,
#Partially deleted in new
chr11	49010178	49015894	chr11:49010178-49015894	7	-	49010178	49010178	16724991	6	494,98,23,231,96,411,	0,1595,3131,3764,4771,5305,
#Partially deleted in new
chr11	49015483	49018589	chr11:49015483-49018589	5	-	49015483	49015483	16724991	2	415,372,	0,2734,
#Partially deleted in new
chr11	49027500	49038451	chr11:49027500-49038451	3	+	49031599	49037977	789624	8	139,186,415,96,231,23,98,974,	0,1289,4095,4775,6645,7594,8800,9977,
#Partially deleted in new
chr11	49028856	49038029	chr11:49028856-49038029	1	+	49031599	49037977	789624	7	119,415,96,231,23,98,552,	0,2739,3419,5289,6238,7444,8621,
#Deleted in new
chr11	49053713	49059112	chr11:49053713-49059112	3	-	49053713	49059112	789624	6	494,98,23,231,95,412,	0,1596,2645,3434,4364,4987,
#Deleted in new
chr11	49067609	49069301	chr11:49067609-49069301	7	+	49067609	49067609	16724991	2	99,474,	0,1218,
#Deleted in new
chr11	49070751	49071000	chr11:49070751-49071000	7	-	49070751	49070751	16724991	1	249,	0,
#Deleted in new
chr11	49081906	49083097	chr11:49081906-49083097	7	+	49081906	49081906	16724991	1	1191,	0,
#Deleted in new
chr11	49092403	49092767	chr11:49092403-49092767	7	+	49092403	49092403	16724991	1	364,	0,
#Deleted in new
chr11	49098162	49101168	chr11:49098162-49101168	7	-	49098162	49098162	16724991	1	3006,	0,
#Deleted in new
chr11	49110755	49111220	chr11:49110755-49111220	7	+	49110755	49110755	16724991	1	465,	0,
#Partially deleted in new
chr11	49117009	49124570	chr11:49117009-49124570	7	-	49117009	49117009	16724991	6	494,98,23,231,96,411,	0,1899,2704,3462,6354,7150,
#Deleted in new
chr11	49133652	49134800	chr11:49133652-49134800	7	-	49133652	49133652	16724991	1	1148,	0,
#Partially deleted in new
chr11	49146634	49208670	chr11:49146634-49208670	3	-	49146755	49208409	0	19	311,93,82,265,91,92,68,64,83,120,86,99,94,187,126,102,187,106,379,	0,2004,7211,7593,10082,11317,18070,22560,24560,26722,28257,29224,36514,39034,40009,46158,53620,59432,61657,
#Partially deleted in new
chr11	49146634	49186096	chr11:49146634-49186096	0	-	49146634	49146634	8553170	14	311,93,82,265,91,92,68,64,83,120,86,99,94,428,	0,2004,7211,7593,10082,11317,18070,22560,24560,26722,28257,29224,36514,39034,
#Partially deleted in new
chr11	49146635	49208636	chr11:49146635-49208636	1	-	49146755	49206850	0	20	310,93,82,265,91,92,68,64,83,120,86,99,94,187,126,102,187,106,97,345,	0,2003,7210,7592,10081,11316,18069,22559,24559,26721,28256,29223,36513,39033,40008,46157,53619,59431,60142,61656,
#Partially deleted in new
chr11	49146635	49208532	chr11:49146635-49208532	1	-	49146755	49208409	0	18	310,82,265,91,92,68,64,83,120,86,99,94,187,126,102,187,106,241,	0,7210,7592,10081,11316,18069,22559,24559,26721,28256,29223,36513,39033,40008,46157,53619,59431,61656,
#Partially deleted in new
chr11	49146635	49208602	chr11:49146635-49208602	0	-	49192893	49208409	789624	17	310,93,82,265,91,92,68,64,83,120,86,99,94,126,102,106,311,	0,2003,7210,7592,10081,11316,18069,22559,24559,26721,28256,29223,36513,40008,46157,59431,61656,
#Partially deleted in new
chr11	49146750	49208372	chr11:49146750-49208372	1	-	49146755	49206850	0	19	195,82,265,91,92,68,64,83,120,86,99,94,187,126,102,187,106,97,81,	0,7095,7477,9966,11201,17954,22444,24444,26606,28141,29108,36398,38918,39893,46042,53504,59316,60027,61541,
#Partially deleted in new
chr11	49154031	49156753	chr11:49154031-49156753	0	-	49154031	49154031	8553170	2	461,37,	0,2685,
#Partially deleted in new
chr11	49162802	49175960	chr11:49162802-49175960	0	-	49162802	49162802	8553170	7	88,68,64,83,120,86,102,	0,1902,6392,8392,10554,12089,13056,
#Deleted in new
chr11	49185593	49186768	chr11:49185593-49186768	0	-	49185593	49185593	8553170	2	262,125,	0,1050,
#Partially deleted in new
chr11	49192753	49208327	chr11:49192753-49208327	0	-	49192753	49192753	8553170	5	141,187,106,97,36,	0,7501,13313,14024,15538,
#Partially deleted in new
chr11	49192791	49208593	chr11:49192791-49208593	0	-	49206309	49208409	789624	5	103,187,106,53,302,	0,7463,13275,13488,15500,
#Partially deleted in new
chr11	49200300	49208160	chr11:49200300-49208160	0	-	49200300	49206119	789624	3	141,106,293,	0,5766,7567,
#Partially deleted in new
chr11	49200372	49208638	chr11:49200372-49208638	0	-	49207872	49208409	789624	4	69,106,138,347,	0,5694,7391,7919,
#Partially deleted in new
chr11	49305713	49379488	chr11:49305713-49379488	7	+	49305713	49305713	16724991	8	228,177,72,87,123,108,114,126,	0,2146,2458,45484,58340,60358,64586,73649,
#Partially deleted in new
chr11	49366070	49379669	chr11:49366070-49379669	5	+	49366070	49366070	16724991	4	109,69,101,299,	0,2643,4232,13300,
#Deleted in new
chr11	49405090	49415789	chr11:49405090-49415789	7	-	49405090	49405090	16724991	2	224,217,	0,10482,
#Deleted in new
chr11	49406189	49406714	chr11:49406189-49406714	7	+	49406189	49406189	16724991	1	525,	0,
#Deleted in new
chr11	49433479	49434438	chr11:49433479-49434438	7	-	49433479	49433479	16724991	1	959,	0,
#Partially deleted in new
chr11	49558545	49810417	chr11:49558545-49810417	7	+	49558545	49558545	16724991	7	170,861,250,85,23,98,676,	0,17500,225277,233429,249109,249992,251196,
#Partially deleted in new
chr11	49560817	49810419	chr11:49560817-49810419	5	+	49560817	49560817	16724991	7	201,861,250,85,23,98,678,	0,15228,223005,231157,246837,247720,248924,
#Partially deleted in new
chr11	49560817	49810417	chr11:49560817-49810417	5	+	49560817	49560817	16724991	7	201,861,250,85,23,98,676,	0,15228,223005,231157,246837,247720,248924,
#Partially deleted in new
chr11	49817777	49825553	chr11:49817777-49825553	7	+	49817777	49817777	16724991	5	132,177,306,120,60,	0,2333,4847,5201,7716,
#Partially deleted in new
chr11	49824838	49826724	chr11:49824838-49826724	7	-	49824838	49824838	16724991	3	106,93,405,	0,785,1481,
#Partially deleted in new
chr11	49833139	49839320	chr11:49833139-49839320	7	-	49833139	49833139	16724991	10	495,96,60,57,54,87,36,24,33,411,	0,1572,2224,2775,3403,3493,3697,4941,5026,5770,
#Partially deleted in new
chr11	49843487	49846533	chr11:49843487-49846533	7	-	49843487	49843487	16724991	3	970,98,23,	0,2062,3023,
#Partially deleted in new
chr11	49850628	49862528	chr11:49850628-49862528	7	+	49850628	49850628	16724991	8	226,313,185,195,307,121,58,97,	0,954,1680,4016,6502,6856,9364,11803,
#Partially deleted in new
chr11	49854079	49859402	chr11:49854079-49859402	7	-	49854079	49854079	16724991	4	328,253,121,37,	0,441,3639,5286,
#Partially deleted in new
chr11	49871825	49874067	chr11:49871825-49874067	7	-	49871825	49871825	16724991	2	245,284,	0,1958,
#Partially deleted in new
chr11	49874944	49876638	chr11:49874944-49876638	7	+	49874944	49874944	16724991	2	99,497,	0,1197,
#Partially deleted in new
chr11	49882998	49884093	chr11:49882998-49884093	7	+	49882998	49882998	16724991	2	402,91,	0,1004,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	49892261	49893777	chr11:49892261-49893777	7	-	49892261	49892261	16724991	1	1516,	0,
#Partially deleted in new
chr11	49898266	49899186	chr11:49898266-49899186	7	-	49898266	49898266	16724991	1	920,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	49915012	49915644	chr11:49915012-49915644	7	-	49915012	49915012	16724991	1	632,	0,
#Partially deleted in new
chr11	49917390	49918478	chr11:49917390-49918478	7	-	49917390	49917390	16724991	1	1088,	0,
#Partially deleted in new
chr11	49920311	49921414	chr11:49920311-49921414	7	-	49920311	49920311	16724991	1	1103,	0,
#Partially deleted in new
chr11	49923048	49923886	chr11:49923048-49923886	7	+	49923048	49923048	16724991	1	838,	0,
#Deleted in new
chr11	49952390	49953419	chr11:49952390-49953419	3	+	49952422	49953352	789624	1	1029,	0,
#Deleted in new
chr11	49981472	49982535	chr11:49981472-49982535	3	-	49981571	49982501	789624	1	1063,	0,
#Partially deleted in new
chr11	50018797	50019695	chr11:50018797-50019695	7	+	50018797	50018797	16724991	1	898,	0,
#Partially deleted in new
chr11	50032873	50033794	chr11:50032873-50033794	3	+	50032873	50033794	789624	1	921,	0,
#Partially deleted in new
chr11	50053409	50054309	chr11:50053409-50054309	7	-	50053409	50053409	16724991	1	900,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	50100891	50102898	chr11:50100891-50102898	7	-	50100891	50100891	16724991	3	84,54,282,	0,488,1725,
#Partially deleted in new
chr11	50170155	50190441	chr11:50170155-50190441	7	+	50170155	50170155	16724991	3	674,147,141,	0,17687,20145,
#Partially deleted in new
chr11	50246553	50247761	chr11:50246553-50247761	7	-	50246553	50246553	16724991	4	148,49,202,91,	0,631,845,1117,
#Partially deleted in new
chr11	50268160	50269273	chr11:50268160-50269273	7	+	50268160	50268160	16724991	1	1113,	0,
#Partially deleted in new
chr11	50279827	50298452	chr11:50279827-50298452	7	-	50279827	50279827	16724991	6	320,52,118,135,107,273,	0,5121,7833,13672,15400,18352,
#Partially deleted in new
chr11	50284948	50295334	chr11:50284948-50295334	5	-	50284948	50284948	16724991	4	52,118,135,107,	0,2712,8551,10279,
#Partially deleted in new
chr11	50290748	50290933	chr11:50290748-50290933	7	+	50290748	50290748	16724991	1	185,	0,
#Partially deleted in new
chr11	50298578	50302128	chr11:50298578-50302128	1	+	50298578	50298578	8553170	2	339,185,	0,3365,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	50298617	50304656	chr11:50298617-50304656	3	+	50298617	50298617	8553170	3	300,124,76,	0,4521,5963,
#Partially deleted in new
chr11	50307680	50361706	chr11:50307680-50361706	7	+	50307680	50307680	16724991	7	47,182,140,85,91,97,168,	0,7734,12686,13233,46304,53291,53858,
#Partially deleted in new
chr11	50315413	50315597	chr11:50315413-50315597	5	+	50315413	50315413	16724991	1	184,	0,
#Partially deleted in new
chr11	50320667	50343927	chr11:50320667-50343927	4	+	50320667	50320667	16724991	2	331,289,	0,22971,
#Partially deleted in new
chr11	50341907	50343864	chr11:50341907-50343864	4	+	50341907	50341907	16724991	3	64,151,226,	0,791,1731,
#Partially deleted in new
chr11	50409041	50422316	chr11:50409041-50422316	7	+	50409041	50409041	16724991	8	147,83,157,101,236,91,74,153,	0,526,7022,9852,11100,11528,11904,13122,
#Deleted in new
chr11	54591479	54592409	chr11:54591479-54592409	7	+	54591479	54591479	16724991	1	930,	0,
#Deleted in new
chr11	54603068	54603998	chr11:54603068-54603998	3	-	54603068	54603998	789624	1	930,	0,
#Deleted in new
chr11	54635036	54635955	chr11:54635036-54635955	7	-	54635036	54635036	16724991	1	919,	0,
#Deleted in new
chr11	54657119	54657716	chr11:54657119-54657716	7	-	54657119	54657119	16724991	1	597,	0,
#Deleted in new
chr11	54659665	54660595	chr11:54659665-54660595	7	+	54659665	54659665	16724991	1	930,	0,
#Deleted in new
chr11	54662579	54663450	chr11:54662579-54663450	7	+	54662579	54662579	16724991	1	871,	0,
#Deleted in new
chr11	54667297	54668210	chr11:54667297-54668210	7	+	54667297	54667297	16724991	1	913,	0,
#Deleted in new
chr11	54682876	54683821	chr11:54682876-54683821	3	+	54682876	54683821	8553170	1	945,	0,
#Deleted in new
chr11	54692449	54693359	chr11:54692449-54693359	7	+	54692449	54692449	16724991	1	910,	0,
#Partially deleted in new
chr11	54706831	54707902	chr11:54706831-54707902	3	+	54706884	54707832	789624	1	1071,	0,
#Deleted in new
chr11	54724846	54725816	chr11:54724846-54725816	7	+	54724846	54724846	16724991	1	970,	0,
#Partially deleted in new
chr11	55262181	55271119	chr11:55262181-55271119	3	+	55262267	55269338	789624	6	130,415,96,23,98,683,	0,2718,3418,6168,7060,8255,
#Deleted in new
chr11	55267407	55267636	chr11:55267407-55267636	7	+	55267407	55267407	16724991	1	229,	0,
#Partially deleted in new
chr11	55279446	55284749	chr11:55279446-55284749	7	-	55279446	55279446	16724991	4	332,251,121,95,	0,444,3638,5208,
#Deleted in new
chr11	55279948	55280289	chr11:55279948-55280289	7	+	55279948	55279948	16724991	1	341,	0,
#Deleted in new
chr11	55291882	55298270	chr11:55291882-55298270	7	-	55291882	55291882	16724991	5	680,98,23,230,792,	0,1776,2839,3578,5596,
#Deleted in new
chr11	55295405	55298232	chr11:55295405-55298232	4	-	55295405	55295405	16724991	3	285,97,374,	0,2073,2453,
#Deleted in new
chr11	55302289	55305060	chr11:55302289-55305060	7	-	55302289	55302289	16724991	3	672,98,32,	0,1771,2739,
#Deleted in new
chr11	55318559	55319465	chr11:55318559-55319465	7	+	55318559	55318559	16724991	1	906,	0,
#Deleted in new
chr11	55325755	55326673	chr11:55325755-55326673	7	+	55325755	55325755	16724991	1	918,	0,
#Deleted in new
chr11	55343150	55344231	chr11:55343150-55344231	3	+	55343200	55344187	789624	1	1081,	0,
#Deleted in new
chr11	55367883	55368918	chr11:55367883-55368918	3	+	55367883	55368918	789624	1	1035,	0,
#Deleted in new
chr11	55367973	55368918	chr11:55367973-55368918	1	+	55367973	55368918	789624	1	945,	0,
#Partially deleted in new
chr11	55388528	55389472	chr11:55388528-55389472	7	+	55388528	55388528	16724991	1	944,	0,
#Deleted in new
chr11	55411525	55411717	chr11:55411525-55411717	7	+	55411525	55411525	16724991	1	192,	0,
#Partially deleted in new
chr11	55430477	55432370	chr11:55430477-55432370	7	+	55430477	55430477	16724991	2	517,411,	0,1482,
#Deleted in new
chr11	55444434	55445338	chr11:55444434-55445338	7	+	55444434	55444434	16724991	1	904,	0,
#Deleted in new
chr11	55466770	55467712	chr11:55466770-55467712	7	+	55466770	55466770	16724991	1	942,	0,
#Partially deleted in new
chr11	55475942	55478512	chr11:55475942-55478512	7	+	55475942	55475942	16724991	2	453,455,	0,2115,
#Deleted in new
chr11	55491204	55492148	chr11:55491204-55492148	7	+	55491204	55491204	16724991	1	944,	0,
#Partially deleted in new
chr11	55506634	55511169	chr11:55506634-55511169	7	+	55506634	55506634	16724991	2	88,1481,	0,3054,
#Deleted in new
chr11	55509728	55510665	chr11:55509728-55510665	5	+	55509728	55509728	16724991	1	937,	0,
#Deleted in new
chr11	55537001	55537924	chr11:55537001-55537924	7	+	55537001	55537001	16724991	1	923,	0,
#Deleted in new
chr11	55554306	55555419	chr11:55554306-55555419	3	+	55554306	55555419	789624	1	1113,	0,
#Deleted in new
chr11	55554468	55555419	chr11:55554468-55555419	1	+	55554468	55555419	789624	1	951,	0,
#Deleted in new
chr11	55572127	55573060	chr11:55572127-55573060	3	+	55572127	55573060	789624	1	933,	0,
#Deleted in new
chr11	55602359	55607645	chr11:55602359-55607645	3	-	55603440	55604373	789624	4	2058,162,158,359,	0,2766,4162,4927,
#Deleted in new
chr11	55603353	55604398	chr11:55603353-55604398	1	-	55603440	55604373	789624	1	1045,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	55635112	55640309	chr11:55635112-55640309	3	+	55638357	55639296	789624	2	104,1982,	0,3215,
#Deleted in new
chr11	55638357	55639296	chr11:55638357-55639296	1	+	55638357	55639296	789624	1	939,	0,
#Deleted in new
chr11	55648326	55652854	chr11:55648326-55652854	3	+	55650903	55651839	789624	2	224,1987,	0,2541,
#Deleted in new
chr11	55650903	55651839	chr11:55650903-55651839	1	+	55650903	55651839	789624	1	936,	0,
#Deleted in new
chr11	55662200	55666096	chr11:55662200-55666096	3	+	55665166	55666096	789624	2	48,972,	0,2924,
#Deleted in new
chr11	55665137	55666195	chr11:55665137-55666195	1	+	55665166	55666096	789624	1	1058,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	55673535	55674675	chr11:55673535-55674675	7	+	55673535	55673535	16724991	1	1140,	0,
#Deleted in new
chr11	55683238	55684374	chr11:55683238-55684374	7	+	55683238	55683238	16724991	1	1136,	0,
#Deleted in new
chr11	55714798	55715727	chr11:55714798-55715727	7	+	55714798	55714798	16724991	1	929,	0,
#Deleted in new
chr11	55723775	55729621	chr11:55723775-55729621	3	+	55724025	55727158	789624	2	279,3406,	0,2440,
#Deleted in new
chr11	55754976	55755957	chr11:55754976-55755957	7	+	55754976	55754976	16724991	1	981,	0,
#Deleted in new
chr11	55773437	55774382	chr11:55773437-55774382	3	+	55773437	55774382	789624	1	945,	0,
#Deleted in new
chr11	55786963	55787905	chr11:55786963-55787905	7	+	55786963	55786963	16724991	1	942,	0,
#Deleted in new
chr11	55795555	55796500	chr11:55795555-55796500	3	+	55795555	55796500	789624	1	945,	0,
#Deleted in new
chr11	55811366	55812476	chr11:55811366-55812476	3	+	55811466	55812402	789624	1	1110,	0,
#Deleted in new
chr11	55819606	55820597	chr11:55819606-55820597	3	+	55819629	55820571	789624	1	991,	0,
#Deleted in new
chr11	55827218	55828154	chr11:55827218-55828154	3	+	55827218	55828154	789624	1	936,	0,
#Deleted in new
chr11	55838751	55839738	chr11:55838751-55839738	3	+	55838751	55839738	789624	1	987,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	55850346	55858547	chr11:55850346-55858547	7	+	55850346	55850346	16724991	2	179,2984,	0,5217,
#Partially deleted in new
chr11	55855591	55856512	chr11:55855591-55856512	5	+	55855591	55855591	16724991	1	921,	0,
#Partially deleted in new
chr11	55863931	55881243	chr11:55863931-55881243	7	+	55863931	55863931	16724991	2	405,496,	0,16816,
#Partially deleted in new
chr11	55865708	55865820	chr11:55865708-55865820	7	+	55865708	55865708	16724991	1	112,	0,
#Partially deleted in new
chr11	55867568	55874537	chr11:55867568-55874537	7	-	55867568	55867568	16724991	4	477,178,708,219,	0,2773,5312,6750,
#Partially deleted in new
chr11	55883296	55891810	chr11:55883296-55891810	3	+	55885428	55891632	789624	7	88,415,96,231,23,98,678,	0,2128,2826,4735,5682,6645,7836,
#Partially deleted in new
chr11	55885919	55891810	chr11:55885919-55891810	1	+	55886140	55891632	789624	5	299,231,23,98,678,	0,2112,3059,4022,5213,
#Deleted in new
chr11	55903340	55904278	chr11:55903340-55904278	7	-	55903340	55903340	16724991	1	938,	0,
#Deleted in new
chr11	55913649	55914582	chr11:55913649-55914582	3	-	55913649	55914582	789624	1	933,	0,
#Deleted in new
chr11	55935455	55936400	chr11:55935455-55936400	3	-	55935455	55936400	789624	1	945,	0,
#Deleted in new
chr11	55948119	55948924	chr11:55948119-55948924	7	-	55948119	55948119	16724991	1	805,	0,
#Deleted in new
chr11	55957215	55957630	chr11:55957215-55957630	7	-	55957215	55957215	16724991	1	415,	0,
#Deleted in new
chr11	55965754	55969945	chr11:55965754-55969945	1	-	55967557	55969907	789624	2	2753,54,	0,4137,
#Deleted in new
chr11	55967498	55968514	chr11:55967498-55968514	3	-	55967557	55968463	789624	1	1016,	0,
#Deleted in new
chr11	55979397	55980103	chr11:55979397-55980103	7	-	55979397	55979397	16724991	1	706,	0,
#Deleted in new
chr11	55993680	55994625	chr11:55993680-55994625	3	-	55993680	55994625	789624	1	945,	0,
#Partially deleted in new
chr11	56015016	56015957	chr11:56015016-56015957	7	-	56015016	56015016	16724991	1	941,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	56027653	56038191	chr11:56027653-56038191	3	+	56030418	56031393	789624	2	59,7801,	0,2737,
#Partially deleted in new
chr11	56030418	56031393	chr11:56030418-56031393	1	+	56030418	56031393	789624	1	975,	0,
#Partially deleted in new
chr11	56049784	56055730	chr11:56049784-56055730	5	+	56049784	56049784	16724991	2	48,1486,	0,4460,
#Partially deleted in new
chr11	56049784	56055730	chr11:56049784-56055730	7	+	56049784	56049784	16724991	2	48,1481,	0,4465,
#Partially deleted in new
chr11	56054376	56055303	chr11:56054376-56055303	5	+	56054376	56054376	16724991	1	927,	0,
#Partially deleted in new
chr11	56071110	56072049	chr11:56071110-56072049	7	+	56071110	56071110	16724991	1	939,	0,
#Partially deleted in new
chr11	56082800	56083739	chr11:56082800-56083739	5	+	56082800	56082800	16724991	1	939,	0,
#Partially deleted in new
chr11	56082800	56084840	chr11:56082800-56084840	7	+	56082800	56082800	16724991	2	986,190,	0,1850,
#Partially deleted in new
chr11	56093276	56094286	chr11:56093276-56094286	3	+	56093307	56094240	789624	1	1010,	0,
#Partially deleted in new
chr11	56097243	56097384	chr11:56097243-56097384	7	-	56097243	56097243	16724991	1	141,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	56103686	56107658	chr11:56103686-56107658	1	+	56105042	56105981	789624	2	301,2787,	0,1185,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	56103686	56107658	chr11:56103686-56107658	3	+	56105042	56105981	789624	2	301,2791,	0,1181,
#Partially deleted in new
chr11	56105017	56106055	chr11:56105017-56106055	1	+	56105045	56105981	789624	1	1038,	0,
#Deleted in new
chr11	56116638	56117256	chr11:56116638-56117256	7	-	56116638	56116638	16724991	1	618,	0,
#Deleted in new
chr11	56122372	56123311	chr11:56122372-56123311	3	+	56122372	56123311	789624	1	939,	0,
#Deleted in new
chr11	56132665	56133494	chr11:56132665-56133494	7	-	56132665	56132665	16724991	1	829,	0,
#Partially deleted in new
chr11	56134720	56140201	chr11:56134720-56140201	0	-	56134720	56134720	8553170	2	2318,29,	0,5452,
#Partially deleted in new
chr11	56134720	56140201	chr11:56134720-56140201	1	-	56136770	56137718	789624	2	3018,29,	0,5452,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	56134720	56140201	chr11:56134720-56140201	3	-	56136770	56137718	789624	2	3777,29,	0,5452,
#Deleted in new
chr11	56136770	56137718	chr11:56136770-56137718	1	-	56136770	56137718	789624	1	948,	0,
#Deleted in new
chr11	56142515	56143387	chr11:56142515-56143387	7	-	56142515	56142515	16724991	1	872,	0,
#Deleted in new
chr11	56159393	56160317	chr11:56159393-56160317	3	-	56159393	56160317	789624	1	924,	0,
#Deleted in new
chr11	56165499	56165921	chr11:56165499-56165921	7	+	56165499	56165499	16724991	1	422,	0,
#Deleted in new
chr11	56176617	56177556	chr11:56176617-56177556	3	+	56176617	56177556	789624	1	939,	0,
#Deleted in new
chr11	56188378	56189251	chr11:56188378-56189251	7	-	56188378	56188378	16724991	1	873,	0,
#Deleted in new
chr11	56205124	56205625	chr11:56205124-56205625	7	-	56205124	56205124	16724991	1	501,	0,
#Partially deleted in new
chr11	56208984	56215222	chr11:56208984-56215222	3	-	56210872	56211820	8553170	2	2861,22,	0,6216,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	56231281	56234255	chr11:56231281-56234255	1	-	56232105	56233062	789624	2	1983,79,	0,2895,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	56232013	56233261	chr11:56232013-56233261	3	-	56232105	56233185	789624	1	1248,	0,
#Partially deleted in new
chr11	56252199	56253222	chr11:56252199-56253222	3	+	56252199	56253222	789624	1	1023,	0,
#Partially deleted in new
chr11	56252253	56253222	chr11:56252253-56253222	1	+	56252253	56253222	789624	1	969,	0,
#Partially deleted in new
chr11	56274153	56276819	chr11:56274153-56276819	3	+	56275638	56276619	789624	3	19,118,1334,	0,482,1332,
#Deleted in new
chr11	56275552	56276670	chr11:56275552-56276670	1	+	56275638	56276619	789624	1	1118,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	56288461	56292254	chr11:56288461-56292254	3	-	56290126	56291062	789624	2	2623,304,	0,3489,
#Deleted in new
chr11	56290052	56291090	chr11:56290052-56291090	1	-	56290126	56291062	789624	1	1038,	0,
#Deleted in new
chr11	56290054	56291050	chr11:56290054-56291050	1	-	56290054	56291050	789624	2	20,907,	0,89,
#Deleted in new
chr11	56296540	56297471	chr11:56296540-56297471	7	-	56296540	56296540	16724991	1	931,	0,
#Partially deleted in new
chr11	56315143	56320639	chr11:56315143-56320639	1	+	56318306	56319245	789624	3	24,58,2356,	0,856,3140,
#Partially deleted in new
chr11	56315143	56320639	chr11:56315143-56320639	3	+	56318306	56319245	789624	2	24,2356,	0,3140,
#Deleted in new
chr11	56318306	56319245	chr11:56318306-56319245	1	+	56318306	56319245	789624	1	939,	0,
#Partially deleted in new
chr11	56331346	56332488	chr11:56331346-56332488	7	-	56331346	56331346	16724991	1	1142,	0,
#Deleted in new
chr11	56335141	56336068	chr11:56335141-56336068	7	+	56335141	56335141	16724991	1	927,	0,
#Deleted in new
chr11	56345944	56347031	chr11:56345944-56347031	3	+	56346038	56346998	789624	1	1087,	0,
#Partially deleted in new
chr11	56354290	56361511	chr11:56354290-56361511	3	+	56360246	56361197	789624	2	35,1285,	0,5936,
#Partially deleted in new
chr11	56354290	56361511	chr11:56354290-56361511	0	+	56354290	56354290	8553170	2	35,1219,	0,6002,
#Deleted in new
chr11	56357327	56358221	chr11:56357327-56358221	7	+	56357327	56357327	16724991	1	894,	0,
#Deleted in new
chr11	56360214	56361288	chr11:56360214-56361288	1	+	56360246	56361197	789624	1	1074,	0,
#Deleted in new
chr11	56375623	56376553	chr11:56375623-56376553	3	+	56375623	56376553	789624	1	930,	0,
#Deleted in new
chr11	56381634	56382589	chr11:56381634-56382589	7	+	56381634	56381634	16724991	1	955,	0,
#Deleted in new
chr11	56393728	56394648	chr11:56393728-56394648	7	+	56393728	56393728	16724991	1	920,	0,
#Deleted in new
chr11	56412695	56413680	chr11:56412695-56413680	3	+	56412695	56413680	8553170	1	985,	0,
#Deleted in new
chr11	56417257	56418232	chr11:56417257-56418232	3	-	56417257	56418232	789624	1	975,	0,
#Deleted in new
chr11	56448667	56449592	chr11:56448667-56449592	7	+	56448667	56448667	16724991	1	925,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	56459220	56473352	chr11:56459220-56473352	3	-	56462468	56470497	789624	4	4210,142,188,132,	0,6886,11133,14000,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	56459220	56473352	chr11:56459220-56473352	1	-	56463379	56470497	789624	3	4210,188,132,	0,11133,14000,
#Deleted in new
chr11	56462468	56463401	chr11:56462468-56463401	3	-	56462468	56463401	789624	1	933,	0,
#Deleted in new
chr11	56469273	56473352	chr11:56469273-56473352	3	-	56469573	56470497	789624	2	1268,132,	0,3947,
#Deleted in new
chr11	56469487	56470538	chr11:56469487-56470538	1	-	56469573	56470497	789624	1	1051,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	56476286	56484839	chr11:56476286-56484839	7	-	56476286	56476286	16724991	2	4176,66,	0,8487,
#Deleted in new
chr11	56479491	56480427	chr11:56479491-56480427	5	-	56479491	56479491	16724991	1	936,	0,
#Deleted in new
chr11	56490348	56491395	chr11:56490348-56491395	3	-	56490434	56491370	789624	1	1047,	0,
#Deleted in new
chr11	56495759	56496412	chr11:56495759-56496412	7	+	56495759	56495759	16724991	1	653,	0,
#Deleted in new
chr11	56500299	56501271	chr11:56500299-56501271	7	-	56500299	56500299	16724991	1	972,	0,
#Deleted in new
chr11	56509572	56510195	chr11:56509572-56510195	7	+	56509572	56509572	16724991	1	623,	0,
#Deleted in new
chr11	56512234	56513171	chr11:56512234-56513171	7	-	56512234	56512234	16724991	1	937,	0,
#Deleted in new
chr11	56526567	56527503	chr11:56526567-56527503	7	-	56526567	56526567	16724991	1	936,	0,
#Deleted in new
chr11	56542261	56543281	chr11:56542261-56543281	3	-	56542339	56543257	789624	1	1020,	0,
#Deleted in new
chr11	56576735	56577787	chr11:56576735-56577787	3	-	56576773	56577721	789624	1	1052,	0,
#Deleted in new
chr11	56597425	56598362	chr11:56597425-56598362	7	-	56597425	56597425	16724991	1	937,	0,
#Deleted in new
chr11	56609235	56614874	chr11:56609235-56614874	3	-	56612554	56613502	789624	2	4284,18,	0,5621,
#Deleted in new
chr11	56612554	56613502	chr11:56612554-56613502	1	-	56612554	56613502	789624	1	948,	0,
#Deleted in new
chr11	56619778	56620810	chr11:56619778-56620810	7	-	56619778	56619778	16724991	1	1032,	0,
#Deleted in new
chr11	56628931	56629860	chr11:56628931-56629860	7	+	56628931	56628931	16724991	1	929,	0,
#Deleted in new
chr11	56633163	56634103	chr11:56633163-56634103	7	-	56633163	56633163	16724991	1	940,	0,
#Deleted in new
chr11	56641465	56642471	chr11:56641465-56642471	3	-	56641488	56642439	789624	1	1006,	0,
#Deleted in new
chr11	56663661	56664687	chr11:56663661-56664687	3	+	56663685	56664618	789624	1	1026,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	56667544	56674664	chr11:56667544-56674664	7	-	56667544	56667544	16724991	4	2439,126,118,61,	0,3750,6603,7059,
#Deleted in new
chr11	56669016	56669944	chr11:56669016-56669944	5	-	56669016	56669016	16724991	1	928,	0,
#Deleted in new
chr11	56690464	56690723	chr11:56690464-56690723	7	+	56690464	56690464	16724991	1	259,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	56699094	56703884	chr11:56699094-56703884	3	+	56700387	56701305	789624	2	96,3515,	0,1275,
#Deleted in new
chr11	56700387	56701305	chr11:56700387-56701305	1	+	56700387	56701305	789624	1	918,	0,
#Partially deleted in new
chr11	56736315	56736462	chr11:56736315-56736462	7	-	56736315	56736315	16724991	1	147,	0,
#Deleted in new
chr11	56740178	56741096	chr11:56740178-56741096	7	+	56740178	56740178	16724991	1	918,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	56741222	56748696	chr11:56741222-56748696	0	-	56741222	56741222	8553170	2	2489,41,	0,7433,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	56741222	56748696	chr11:56741222-56748696	1	-	56742827	56743766	789624	2	2562,41,	0,7433,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	56741222	56748697	chr11:56741222-56748697	3	-	56742827	56743766	789624	2	2566,42,	0,7433,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	56741222	56748696	chr11:56741222-56748696	0	-	56741222	56741222	8553170	2	2486,41,	0,7433,
#Deleted in new
chr11	56742827	56743811	chr11:56742827-56743811	1	-	56742827	56743811	789624	1	984,	0,
#Deleted in new
chr11	56743872	56743981	chr11:56743872-56743981	3	+	56743872	56743872	5263520	1	109,	0,
#Deleted in new
chr11	56751022	56751902	chr11:56751022-56751902	7	-	56751022	56751022	16724991	1	880,	0,
#Deleted in new
chr11	56775260	56776206	chr11:56775260-56776206	7	-	56775260	56775260	16724991	1	946,	0,
#Deleted in new
chr11	56790205	56790965	chr11:56790205-56790965	7	-	56790205	56790205	16724991	1	760,	0,
#Deleted in new
chr11	56801855	56802794	chr11:56801855-56802794	5	-	56801855	56801855	16724991	1	939,	0,
#Partially deleted in new
chr11	56802075	56819647	chr11:56802075-56819647	4	-	56802075	56802075	16724991	2	96,67,	0,17505,
#Partially deleted in new
chr11	56802083	56819708	chr11:56802083-56819708	4	-	56802083	56802083	16724991	3	299,284,128,	0,441,17497,
#Partially deleted in new
chr11	56802083	56820422	chr11:56802083-56820422	7	-	56802083	56802083	16724991	2	299,322,	0,18017,
#Deleted in new
chr11	56819572	56820516	chr11:56819572-56820516	3	-	56819572	56820516	8553170	1	944,	0,
#Partially deleted in new
chr11	56890612	56927885	chr11:56890612-56927885	7	+	56890612	56890612	16724991	12	321,111,198,102,126,60,75,111,96,78,123,45,	0,9426,12259,13795,20473,25625,31695,31950,33080,33658,35726,37228,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	56970849	56972146	chr11:56970849-56972146	7	+	56970849	56970849	16724991	1	1297,	0,
#Partially deleted in new
chr11	56988871	56989867	chr11:56988871-56989867	3	+	56988913	56989843	789624	1	996,	0,
#Partially deleted in new
chr11	57018099	57019021	chr11:57018099-57019021	7	+	57018099	57018099	16724991	1	922,	0,
#Deleted in new
chr11	57029407	57029722	chr11:57029407-57029722	7	+	57029407	57029407	16724991	1	315,	0,
#Deleted in new
chr11	57037533	57038436	chr11:57037533-57038436	7	+	57037533	57037533	16724991	1	903,	0,
#Deleted in new
chr11	57045090	57045390	chr11:57045090-57045390	7	+	57045090	57045090	16724991	1	300,	0,
#Deleted in new
chr11	57055586	57056132	chr11:57055586-57056132	7	+	57055586	57055586	16724991	1	546,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	57181746	57191717	chr11:57181746-57191717	3	+	57181893	57187480	789624	2	937,4473,	0,5498,
#Deleted in new
chr11	57233576	57237235	chr11:57233576-57237235	0	-	57235861	57237004	0	2	282,1444,	0,2215,
#Deleted in new
chr11	57233592	57237201	chr11:57233592-57237201	1	-	57235861	57237004	0	1	3609,	0,
#Deleted in new
chr11	57233592	57237314	chr11:57233592-57237314	3	-	57235861	57237004	0	2	266,1523,	0,2199,
#Partially deleted in new
chr11	57299637	57324952	chr11:57299637-57324952	0	-	57320074	57321885	789624	7	324,1666,1356,70,648,159,113,	0,9253,12896,18180,20427,22154,25202,
#Partially deleted in new
chr11	57299641	57324927	chr11:57299641-57324927	3	-	57300539	57321885	789624	12	440,73,158,137,151,367,2162,1356,70,634,159,88,	0,886,1242,2165,2432,2817,8753,12892,18176,20437,22150,25198,
#Deleted in new
chr11	57299641	57300679	chr11:57299641-57300679	0	-	57299641	57299641	8553170	2	440,152,	0,886,
#Partially deleted in new
chr11	57299643	57322197	chr11:57299643-57322197	1	-	57300539	57321885	789624	11	438,73,158,137,151,367,2162,1356,70,634,406,	0,884,1240,2163,2430,2815,8751,12890,18174,20435,22148,
#Deleted in new
chr11	57299675	57303479	chr11:57299675-57303479	0	-	57299675	57299675	8553170	6	406,73,158,137,151,1021,	0,852,1208,2131,2398,2783,
#Partially deleted in new
chr11	57309831	57311469	chr11:57309831-57311469	0	-	57309831	57311363	789624	2	725,232,	0,1406,
#Deleted in new
chr11	57320376	57322335	chr11:57320376-57322335	0	-	57320376	57321885	789624	3	336,159,99,	0,1415,1860,
#Deleted in new
chr11	57325602	57327958	chr11:57325602-57327958	3	+	57325602	57325602	8553170	2	95,216,	0,2140,
#Partially deleted in new
chr11	57325984	57335877	chr11:57325984-57335877	3	-	57326406	57335121	0	17	494,187,89,171,130,46,139,73,222,129,104,231,191,106,186,173,148,	0,718,1441,1727,2312,4108,4306,4870,5683,6167,6398,6640,6974,7450,8478,9083,9745,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	57325985	57335851	chr11:57325985-57335851	0	-	57325985	57325985	8553170	11	493,812,171,1842,637,222,129,104,916,186,784,	0,717,1726,2311,4305,5682,6166,6397,6639,8477,9082,
#Partially deleted in new
chr11	57326871	57330927	chr11:57326871-57330927	0	-	57326871	57330927	789624	8	18,89,171,130,46,139,9,73,	0,554,840,1425,3221,3419,3861,3983,
#Partially deleted in new
chr11	57332444	57335473	chr11:57332444-57335473	0	-	57332444	57333489	789624	6	42,231,191,106,186,192,	0,180,514,990,2018,2837,
#Partially deleted in new
chr11	57332834	57335873	chr11:57332834-57335873	0	-	57332834	57333489	789624	5	21,191,106,186,144,	0,124,600,1628,2895,
#Deleted in new
chr11	57338373	57340727	chr11:57338373-57340727	0	+	57338373	57338373	8553170	2	296,172,	0,2182,
#Partially deleted in new
chr11	57338474	57370076	chr11:57338474-57370076	1	+	57338550	57369997	789624	13	195,136,72,64,94,78,142,137,82,9,66,78,193,	0,8069,8641,8940,9695,10152,11282,12287,29534,29617,29897,30886,31409,
#Partially deleted in new
chr11	57338516	57370600	chr11:57338516-57370600	3	+	57338550	57369997	0	12	153,136,72,64,94,78,142,137,94,66,78,717,	0,8027,8599,8898,9653,10110,11240,12245,29492,29855,30844,31367,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	57347423	57350701	chr11:57347423-57350701	0	+	57347423	57348267	789624	5	55,185,78,142,377,	0,746,1203,2333,2901,
#Partially deleted in new
chr11	57376768	57381150	chr11:57376768-57381150	3	-	57376849	57380708	789624	6	140,112,132,314,134,37,	0,956,1912,2725,3879,4345,
#Partially deleted in new
chr11	57386793	57390657	chr11:57386793-57390657	3	-	57387474	57389944	0	6	740,112,132,308,70,62,	0,960,1783,2216,3093,3802,
#Partially deleted in new
chr11	57386814	57390637	chr11:57386814-57390637	1	-	57387474	57389944	0	6	719,112,132,275,70,42,	0,939,1762,2228,3072,3781,
#Partially deleted in new
chr11	57386942	57390636	chr11:57386942-57390636	1	-	57387474	57389944	0	6	591,112,132,308,70,154,	0,811,1634,2067,2944,3540,
#Partially deleted in new
chr11	57387364	57424059	chr11:57387364-57424059	0	-	57387364	57387364	8553170	13	169,112,132,308,70,71,117,174,98,140,93,77,78,	0,389,1212,1645,2522,12131,27250,27568,29208,30383,33607,33932,36617,
#Partially deleted in new
chr11	57387442	57390629	chr11:57387442-57390629	0	-	57387442	57387442	8553170	5	91,112,741,70,34,	0,311,1134,2444,3153,
#Partially deleted in new
chr11	57389009	57410113	chr11:57389009-57410113	3	-	57389009	57410113	789624	4	308,70,124,179,	0,877,20165,20925,
#Partially deleted in new
chr11	57389154	57407879	chr11:57389154-57407879	0	-	57407791	57407879	789624	3	163,70,300,	0,732,18425,
#Partially deleted in new
chr11	57406953	57426945	chr11:57406953-57426945	1	-	57407791	57426172	789624	14	943,124,187,117,174,98,140,93,77,47,130,364,65,60,	0,2221,2981,7661,7979,9619,10794,14018,14343,17028,18587,19035,19634,19932,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	57406953	57408749	chr11:57406953-57408749	0	-	57406953	57406953	8553170	1	1796,	0,
#Partially deleted in new
chr11	57406955	57427580	chr11:57406955-57427580	3	-	57407791	57426172	789624	14	941,124,187,117,174,98,140,93,77,47,130,364,65,38,	0,2219,2979,7659,7977,9617,10792,14016,14341,17026,18585,19033,19632,20587,
#Partially deleted in new
chr11	57406955	57427121	chr11:57406955-57427121	1	-	57407791	57426172	789624	14	941,124,187,117,174,98,140,93,77,47,130,364,65,60,	0,2219,2979,7659,7977,9617,10792,14016,14341,17026,18585,19033,19632,20106,
#Partially deleted in new
chr11	57407405	57426752	chr11:57407405-57426752	1	-	57407791	57426172	789624	13	491,124,187,117,174,98,140,93,77,47,130,364,165,	0,1769,2529,7209,7527,9167,10342,13566,13891,16576,18135,18583,19182,
#Partially deleted in new
chr11	57407530	57416653	chr11:57407530-57416653	0	-	57409257	57416653	789624	5	366,124,117,174,81,	0,1644,7084,7402,9042,
#Partially deleted in new
chr11	57407769	57427121	chr11:57407769-57427121	1	-	57407791	57426172	789624	14	127,124,187,117,174,98,140,93,77,47,169,401,65,60,	0,1405,2165,6845,7163,8803,9978,13202,13527,16212,17771,18219,18818,19292,
#Partially deleted in new
chr11	57414680	57427043	chr11:57414680-57427043	0	-	57414680	57426172	789624	11	51,174,98,140,93,77,47,130,401,65,158,	0,252,1892,3067,6291,6616,9301,10860,11308,11907,12205,
#Partially deleted in new
chr11	57415213	57426479	chr11:57415213-57426479	0	-	57415213	57415213	8553170	8	184,98,140,93,77,47,130,491,	0,1359,2534,5758,6083,8768,10327,10775,
#Partially deleted in new
chr11	57417879	57425856	chr11:57417879-57425856	0	-	57417879	57425695	789624	5	8,93,77,47,316,	0,3092,3417,6102,7661,
#Partially deleted in new
chr11	57420995	57427420	chr11:57420995-57427420	0	-	57420995	57426172	789624	7	69,77,47,130,364,65,49,	0,301,2986,4545,4993,5592,6376,
#Partially deleted in new
chr11	57421058	57426652	chr11:57421058-57426652	0	-	57421058	57426172	789624	6	6,77,47,130,328,65,	0,238,2923,4482,4930,5529,
#Partially deleted in new
chr11	57421355	57427121	chr11:57421355-57427121	0	-	57421355	57421355	8553170	5	18,47,364,65,60,	0,2626,4633,5232,5706,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	57423682	57426159	chr11:57423682-57426159	0	-	57423682	57423682	8553170	4	41,47,130,171,	0,299,1858,2306,
#Partially deleted in new
chr11	57423981	57427100	chr11:57423981-57427100	0	-	57423981	57426172	789624	5	47,169,328,65,39,	0,1559,2007,2606,3080,
#Partially deleted in new
chr11	57423984	57427119	chr11:57423984-57427119	0	-	57423984	57426172	789624	4	44,130,328,58,	0,1556,2004,3077,
#Partially deleted in new
chr11	57424013	57427121	chr11:57424013-57427121	0	-	57424013	57426172	789624	4	15,130,384,60,	0,1527,1975,3048,
#Partially deleted in new
chr11	57424019	57427485	chr11:57424019-57427485	0	-	57424019	57426172	789624	4	9,130,364,78,	0,1521,1969,3388,
#Partially deleted in new
chr11	57425549	57427115	chr11:57425549-57427115	0	-	57425549	57426172	789624	3	121,364,54,	0,439,1512,
#Partially deleted in new
chr11	57425561	57427456	chr11:57425561-57427456	0	-	57425561	57426172	789624	4	109,364,65,49,	0,427,1026,1846,
#Partially deleted in new
chr11	57425619	57427115	chr11:57425619-57427115	0	-	57425619	57426172	789624	4	51,401,65,54,	0,369,968,1442,
#Deleted in new
chr11	57425647	57426655	chr11:57425647-57426655	0	-	57425647	57426172	789624	3	62,364,68,	0,341,940,
#Partially deleted in new
chr11	57425702	57427496	chr11:57425702-57427496	0	-	57425702	57426172	789624	4	7,401,65,89,	0,286,885,1705,
#Partially deleted in new
chr11	57426039	57427121	chr11:57426039-57427121	0	-	57426039	57426172	789624	3	350,163,60,	0,548,1022,
#Partially deleted in new
chr11	57426106	57427344	chr11:57426106-57427344	0	-	57426106	57426172	789624	3	246,65,86,	0,481,1152,
#Partially deleted in new
chr11	57426167	57427043	chr11:57426167-57427043	0	-	57426167	57426172	8553170	3	185,163,158,	0,420,718,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	57450182	57450299	chr11:57450182-57450299	7	+	57450182	57450182	16724991	1	117,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	57451689	57452022	chr11:57451689-57452022	3	+	57451689	57451689	8553170	1	333,	0,
#Partially deleted in new
chr11	57460548	57477534	chr11:57460548-57477534	3	+	57460865	57476911	789624	3	348,482,1373,	0,7060,15613,
#Partially deleted in new
chr11	57460856	57468884	chr11:57460856-57468884	1	+	57460865	57468871	789624	3	40,482,115,	0,6752,7913,
#Partially deleted in new
chr11	57460865	57468630	chr11:57460865-57468630	1	+	57460865	57468630	789624	3	31,482,69,	0,6743,7696,
#Deleted in new
chr11	57476492	57477534	chr11:57476492-57477534	3	-	57476492	57476492	8553170	2	146,538,	0,504,
#Partially deleted in new
chr11	57484533	57515786	chr11:57484533-57515786	3	-	57485095	57514111	789624	15	709,124,74,142,139,36,147,179,134,93,77,56,178,167,343,	0,2561,4382,4717,6690,7057,7182,9459,11497,13219,16245,16454,16618,29424,30910,
#Partially deleted in new
chr11	57484535	57514885	chr11:57484535-57514885	1	-	57485095	57514111	789624	15	707,124,74,142,139,36,147,179,134,93,77,56,178,167,105,	0,2559,4380,4715,6688,7055,7180,9457,11495,13217,16243,16452,16616,29422,30245,
#Partially deleted in new
chr11	57487179	57501319	chr11:57487179-57501319	0	-	57487179	57501319	789624	6	39,74,142,77,56,168,	0,1736,2071,13599,13808,13972,
#Partially deleted in new
chr11	57491252	57494520	chr11:57491252-57494520	0	-	57491252	57491252	8553170	4	110,36,147,528,	0,338,463,2740,
#Partially deleted in new
chr11	57491302	57499677	chr11:57491302-57499677	0	-	57491302	57491302	8553170	7	60,36,147,179,134,93,125,	0,288,413,2690,4728,6450,8250,
#Partially deleted in new
chr11	57491802	57514851	chr11:57491802-57514851	0	-	57494120	57514111	789624	7	60,179,77,56,178,167,71,	0,2190,8976,9185,9349,22155,22978,
#Partially deleted in new
chr11	57493992	57514615	chr11:57493992-57514615	0	-	57493992	57514111	789624	7	179,134,77,56,178,167,208,	0,2038,6786,6995,7159,19965,20415,
#Partially deleted in new
chr11	57497752	57515780	chr11:57497752-57515780	0	-	57501351	57514111	789624	6	93,77,56,223,167,337,	0,3026,3235,3399,16205,17691,
#Partially deleted in new
chr11	57497841	57514833	chr11:57497841-57514833	0	-	57501351	57514111	789624	6	4,77,56,223,167,53,	0,2937,3146,3310,16116,16939,
#Partially deleted in new
chr11	57501151	57515686	chr11:57501151-57515686	0	-	57501151	57514111	789624	4	178,167,102,243,	0,12806,13948,14292,
#Partially deleted in new
chr11	57528462	57530765	chr11:57528462-57530765	3	-	57528716	57530189	0	3	456,116,108,	0,1656,2195,
#Partially deleted in new
chr11	57528625	57530803	chr11:57528625-57530803	1	-	57528716	57530189	0	3	293,116,77,	0,1493,2101,
#Partially deleted in new
chr11	57528640	57530734	chr11:57528640-57530734	1	-	57528716	57530189	0	3	278,175,77,	0,1478,2017,
#Partially deleted in new
chr11	57542640	57550274	chr11:57542640-57550274	3	+	57542642	57550112	789624	7	734,133,52,156,115,152,307,	0,983,1228,3240,3592,3860,7327,
#Partially deleted in new
chr11	57542642	57550274	chr11:57542642-57550274	1	+	57542642	57550112	789624	8	538,83,133,52,156,115,152,307,	0,616,981,1226,3238,3590,3858,7325,
#Partially deleted in new
chr11	57551655	57568284	chr11:57551655-57568284	1	-	57552357	57554548	0	4	854,187,96,436,	0,2781,8681,16193,
#Partially deleted in new
chr11	57551661	57567807	chr11:57551661-57567807	3	-	57552357	57567611	0	4	848,187,96,223,	0,2775,8675,15923,
#Partially deleted in new
chr11	57552271	57560516	chr11:57552271-57560516	0	-	57552271	57552271	8553170	3	238,187,180,	0,2165,8065,
#Partially deleted in new
chr11	57552424	57567326	chr11:57552424-57567326	0	-	57552424	57554548	789624	4	85,187,96,300,	0,2012,7912,14602,
#Partially deleted in new
chr11	57552458	57567303	chr11:57552458-57567303	0	-	57552458	57567057	789624	4	51,187,96,294,	0,1978,7878,14551,
#Deleted in new
chr11	57576291	57577080	chr11:57576291-57577080	7	-	57576291	57576291	16724991	1	789,	0,
#Partially deleted in new
chr11	57597386	57600308	chr11:57597386-57600308	0	+	57598270	57600308	789624	3	145,73,430,	0,862,2492,
#Partially deleted in new
chr11	57597517	57614853	chr11:57597517-57614853	3	+	57598270	57614581	0	8	205,73,499,135,204,140,220,526,	0,731,2361,4517,8492,8890,14199,16810,
#Partially deleted in new
chr11	57597680	57600092	chr11:57597680-57600092	0	+	57598168	57600092	789624	3	42,313,214,	0,328,2198,
#Partially deleted in new
chr11	57597682	57614846	chr11:57597682-57614846	1	+	57598270	57614581	789624	8	40,73,499,135,204,140,109,519,	0,566,2196,4352,8327,8725,14145,16645,
#Partially deleted in new
chr11	57597687	57614739	chr11:57597687-57614739	1	+	57598270	57614581	0	8	35,73,514,135,204,140,220,412,	0,561,2176,4347,8322,8720,14029,16640,
#Partially deleted in new
chr11	57597689	57614847	chr11:57597689-57614847	1	+	57599983	57614581	0	7	33,499,135,204,140,220,520,	0,2189,4345,8320,8718,14027,16638,
#Partially deleted in new
chr11	57597802	57614814	chr11:57597802-57614814	1	+	57598168	57614581	789624	7	519,499,135,204,167,220,487,	0,2076,4232,8207,8578,13914,16525,
#Partially deleted in new
chr11	57598232	57614790	chr11:57598232-57614790	0	+	57598270	57602115	789624	4	89,135,220,463,	0,3802,13484,16095,
#Partially deleted in new
chr11	57598270	57614581	chr11:57598270-57614581	0	+	57598270	57602115	789624	6	51,135,204,140,220,254,	0,3764,7739,8137,13446,16057,
#Partially deleted in new
chr11	57598270	57614581	chr11:57598270-57614581	1	+	57598270	57614349	789624	4	51,297,32,254,	0,1608,13634,16057,
#Partially deleted in new
chr11	57602044	57606056	chr11:57602044-57606056	0	+	57602044	57602044	8553170	2	125,454,	0,3558,
#Partially deleted in new
chr11	57606406	57614833	chr11:57606406-57614833	0	+	57606406	57611747	789624	4	141,89,220,506,	0,304,5310,7921,
#Partially deleted in new
chr11	57611230	57614529	chr11:57611230-57614529	0	+	57611230	57611230	8553170	2	706,202,	0,3097,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	57638023	57650709	chr11:57638023-57650709	0	+	57638023	57638023	8553170	2	155,412,	0,12274,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	57638375	57652790	chr11:57638375-57652790	3	+	57638375	57638375	8553170	2	297,2493,	0,11922,
#Deleted in new
chr11	57641197	57641286	chr11:57641197-57641286	3	+	57641197	57641197	5263520	1	89,	0,
#Deleted in new
chr11	57645086	57647577	chr11:57645086-57647577	0	-	57645086	57645086	8553170	4	984,498,325,105,	0,1210,1880,2386,
#Deleted in new
chr11	57645086	57649904	chr11:57645086-57649904	0	-	57646378	57647107	789624	4	984,109,325,220,	0,1210,1880,4598,
#Deleted in new
chr11	57645087	57649944	chr11:57645087-57649944	1	-	57645980	57647107	789624	5	983,109,44,325,260,	0,1209,1663,1879,4597,
#Deleted in new
chr11	57645087	57649944	chr11:57645087-57649944	3	-	57645980	57647107	789624	5	983,109,44,2812,52,	0,1209,1663,1879,4805,
#Deleted in new
chr11	57645091	57649775	chr11:57645091-57649775	0	-	57645091	57645091	8553170	4	979,498,325,91,	0,1205,1875,4593,
#Deleted in new
chr11	57645792	57647516	chr11:57645792-57647516	1	-	57645980	57647107	789624	5	278,109,44,325,133,	0,504,958,1174,1591,
#Deleted in new
chr11	57646349	57649909	chr11:57646349-57649909	0	-	57646349	57647107	789624	4	56,44,236,225,	0,401,617,3335,
#Deleted in new
chr11	57646721	57649938	chr11:57646721-57649938	0	-	57646721	57646721	8553170	3	73,236,254,	0,245,2963,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	57646885	57650732	chr11:57646885-57650732	0	+	57646885	57646885	8553170	2	135,435,	0,3412,
#Deleted in new
chr11	57647196	57649938	chr11:57647196-57649938	0	-	57647196	57647196	8553170	3	95,214,254,	0,276,2488,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	57648345	57650775	chr11:57648345-57650775	0	+	57648345	57648345	8553170	2	102,478,	0,1952,
#Deleted in new
chr11	57648459	57649936	chr11:57648459-57649936	0	-	57648459	57648459	8553170	2	324,252,	0,1225,
#Partially deleted in new
chr11	57648991	57659752	chr11:57648991-57659752	0	+	57659476	57659752	789624	2	268,298,	0,10463,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	57649218	57650813	chr11:57649218-57650813	0	+	57649218	57649218	8553170	2	41,516,	0,1079,
#Partially deleted in new
chr11	57657015	57661849	chr11:57657015-57661849	1	+	57657069	57661436	789624	3	65,628,1085,	0,2439,3749,
#Partially deleted in new
chr11	57657157	57661868	chr11:57657157-57661868	3	+	57659476	57661436	789624	3	703,628,1104,	0,2297,3607,
#Partially deleted in new
chr11	57657751	57659873	chr11:57657751-57659873	0	+	57659476	57659873	789624	2	109,444,	0,1678,
#Partially deleted in new
chr11	57657759	57661436	chr11:57657759-57661436	1	+	57659476	57661436	789624	3	101,619,672,	0,1704,3005,
#Partially deleted in new
chr11	57657762	57661864	chr11:57657762-57661864	1	+	57659476	57661436	789624	3	98,436,1100,	0,1692,3002,
#Partially deleted in new
chr11	57667746	57700363	chr11:57667746-57700363	1	+	57682476	57700031	789624	11	441,122,158,173,103,92,133,124,113,860,498,	0,14675,20761,22284,22588,24864,26036,28173,29014,30812,32119,
#Partially deleted in new
chr11	57667895	57701187	chr11:57667895-57701187	3	+	57673090	57700031	789624	12	292,1174,122,158,173,103,92,133,124,113,860,1322,	0,4125,14526,20612,22135,22439,24715,25887,28024,28865,30663,31970,
#Partially deleted in new
chr11	57668104	57692670	chr11:57668104-57692670	0	+	57688587	57692670	789624	5	83,158,173,103,60,	0,20403,21926,22230,24506,
#Partially deleted in new
chr11	57668291	57672418	chr11:57668291-57672418	0	+	57668291	57668291	8553170	2	116,398,	0,3729,
#Partially deleted in new
chr11	57668449	57672413	chr11:57668449-57672413	0	+	57668449	57668449	8553170	2	147,393,	0,3571,
#Partially deleted in new
chr11	57673143	57690392	chr11:57673143-57690392	0	+	57688587	57690392	789624	4	51,158,173,58,	0,15364,16887,17191,
#Partially deleted in new
chr11	57681478	57701182	chr11:57681478-57701182	0	+	57681478	57681478	8553170	10	220,122,158,407,92,133,124,113,860,1317,	0,943,7029,8552,11132,12304,14441,15282,17080,18387,
#Partially deleted in new
chr11	57682539	57698835	chr11:57682539-57698835	0	+	57682539	57698835	789624	7	4,158,92,133,124,113,277,	0,5968,10071,11243,13380,14221,16019,
#Partially deleted in new
chr11	57703713	57712323	chr11:57703713-57712323	1	-	57704621	57712230	789624	4	922,97,257,361,	0,1005,1259,8249,
#Partially deleted in new
chr11	57703713	57712323	chr11:57703713-57712323	3	-	57704037	57712230	789624	5	393,95,97,257,361,	0,588,1005,1259,8249,
#Partially deleted in new
chr11	57703787	57712214	chr11:57703787-57712214	0	-	57704621	57712214	789624	5	319,334,97,257,252,	0,514,931,1185,8175,
#Partially deleted in new
chr11	57704229	57712207	chr11:57704229-57712207	0	-	57704229	57704229	8553170	3	586,257,245,	0,743,7733,
#Partially deleted in new
chr11	57704748	57712221	chr11:57704748-57712221	0	-	57704748	57704748	8553170	2	481,259,	0,7214,
#Partially deleted in new
chr11	57712599	57739181	chr11:57712599-57739181	0	+	57712618	57738725	789624	4	208,61,376,51,	0,25008,26064,26531,
#Partially deleted in new
chr11	57712602	57740973	chr11:57712602-57740973	1	+	57712618	57740245	0	7	205,61,77,107,66,130,875,	0,25005,25751,26061,26371,26528,27496,
#Partially deleted in new
chr11	57712604	57791586	chr11:57712604-57791586	3	+	57712618	57789098	789624	4	203,61,119,202,	0,25003,76432,78780,
#Partially deleted in new
chr11	57712606	57740973	chr11:57712606-57740973	3	+	57712618	57740245	0	8	201,61,114,77,107,66,130,875,	0,25001,25306,25747,26057,26367,26524,27492,
#Partially deleted in new
chr11	57712606	57740369	chr11:57712606-57740369	0	+	57712618	57739141	789624	4	201,61,130,271,	0,25001,26524,27492,
#Partially deleted in new
chr11	57712611	57739212	chr11:57712611-57739212	0	+	57712618	57737933	789624	6	196,61,191,107,66,82,	0,24996,25224,26052,26362,26519,
#Partially deleted in new
chr11	57712613	57740369	chr11:57712613-57740369	0	+	57712618	57738725	789624	6	194,61,107,66,130,271,	0,24994,26050,26360,26517,27485,
#Partially deleted in new
chr11	57712613	57740969	chr11:57712613-57740969	0	+	57712618	57737933	789624	8	194,61,191,77,107,66,130,871,	0,24994,25222,25740,26050,26360,26517,27485,
#Partially deleted in new
chr11	57712613	57738417	chr11:57712613-57738417	0	+	57712618	57737790	789624	4	194,61,241,64,	0,24994,25172,25740,
#Partially deleted in new
chr11	57712624	57738187	chr11:57712624-57738187	0	+	57712624	57712624	8553170	2	183,580,	0,24983,
#Partially deleted in new
chr11	57718043	57718530	chr11:57718043-57718530	7	-	57718043	57718043	16724991	1	487,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	57741249	57743411	chr11:57741249-57743411	1	+	57741595	57742217	789624	5	468,7,136,131,549,	0,559,569,867,1613,
#Deleted in new
chr11	57741352	57743038	chr11:57741352-57743038	3	+	57741595	57742217	789624	4	365,146,131,176,	0,456,764,1510,
#Deleted in new
chr11	57741512	57743057	chr11:57741512-57743057	0	+	57741512	57741512	8553170	2	205,1249,	0,296,
#Deleted in new
chr11	57741571	57742657	chr11:57741571-57742657	1	+	57741595	57742217	789624	3	146,146,541,	0,237,545,
#Deleted in new
chr11	57741681	57743038	chr11:57741681-57743038	0	+	57741681	57742217	789624	4	36,146,111,176,	0,127,435,1181,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	57741698	57743514	chr11:57741698-57743514	0	+	57741698	57741698	8553170	3	256,131,652,	0,418,1164,
#Partially deleted in new
chr11	57742162	57793243	chr11:57742162-57793243	3	+	57742162	57742217	789624	4	85,122,289,84,	0,700,49222,50997,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	57743031	57743554	chr11:57743031-57743554	0	+	57743031	57743031	8553170	1	523,	0,
#Partially deleted in new
chr11	57743513	57751376	chr11:57743513-57751376	1	-	57744133	57751188	789624	2	2635,312,	0,7551,
#Partially deleted in new
chr11	57743517	57751781	chr11:57743517-57751781	3	-	57744133	57751188	789624	3	2631,172,241,	0,7547,8023,
#Partially deleted in new
chr11	57746004	57751781	chr11:57746004-57751781	0	-	57746004	57751188	789624	3	144,172,241,	0,5060,5536,
#Partially deleted in new
chr11	57753242	57819546	chr11:57753242-57819546	1	+	57791478	57816308	0	19	300,119,289,72,153,536,464,184,118,154,69,128,151,193,115,88,63,107,3250,	0,35794,38142,40767,42334,43214,48490,50378,51420,52639,53672,54922,55147,56031,56866,58156,61068,62151,63054,
#Partially deleted in new
chr11	57753289	57817940	chr11:57753289-57817940	1	+	57791478	57816308	789624	20	118,119,289,72,153,536,464,184,118,154,18,69,128,151,193,115,88,63,107,1641,	0,35747,38095,40720,42287,43167,48443,50331,51373,52592,53171,53625,54875,55100,55984,56819,58109,61021,62104,63010,
#Partially deleted in new
chr11	57753301	57802124	chr11:57753301-57802124	0	+	57801745	57802124	789624	2	106,392,	0,48431,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57791478	57816308	0	19	250,119,289,72,153,536,464,184,118,154,69,128,151,193,115,88,63,107,2882,	0,27240,29588,32213,33780,34660,39936,41824,42866,44085,45118,46368,46593,47477,48312,49602,52514,53597,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57791478	57816308	0	20	323,119,289,72,153,536,464,184,118,154,69,128,151,193,115,88,63,107,87,2882,	0,27240,29588,32213,33780,34660,39936,41824,42866,44085,45118,46368,46593,47477,48312,49602,52514,53597,54118,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57791478	57816308	0	19	323,119,289,72,153,536,464,184,118,154,69,128,151,193,115,88,107,87,2882,	0,27240,29588,32213,33780,34660,39936,41824,42866,44085,45118,46368,46593,47477,48312,49602,53597,54118,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57791478	57816308	0	20	323,119,289,72,153,536,464,184,118,154,18,69,128,151,193,115,88,63,107,2882,	0,27240,29588,32213,33780,34660,39936,41824,42866,44085,44664,45118,46368,46593,47477,48312,49602,52514,53597,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	3	+	57791478	57816308	0	21	323,119,289,72,153,536,464,184,118,154,18,69,128,151,193,115,88,63,107,87,2882,	0,27240,29588,32213,33780,34660,39936,41824,42866,44085,44664,45118,46368,46593,47477,48312,49602,52514,53597,54118,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57795612	57816308	0	19	250,72,153,536,464,184,118,154,18,69,128,151,193,115,88,63,107,87,2882,	0,32213,33780,34660,39936,41824,42866,44085,44664,45118,46368,46593,47477,48312,49602,52514,53597,54118,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57795612	57816308	0	17	323,72,153,536,464,184,118,154,69,128,151,193,115,88,63,107,2882,	0,32213,33780,34660,39936,41824,42866,44085,45118,46368,46593,47477,48312,49602,52514,53597,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57791478	57816308	0	18	250,289,72,153,536,464,184,118,154,69,128,151,193,115,88,63,107,2882,	0,29588,32213,33780,34660,39936,41824,42866,44085,45118,46368,46593,47477,48312,49602,52514,53597,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57801745	57816308	0	15	250,464,184,118,154,18,69,128,151,193,115,88,63,107,2882,	0,39936,41824,42866,44085,44664,45118,46368,46593,47477,48312,49602,52514,53597,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57791640	57816308	0	19	250,180,72,153,536,464,184,118,154,69,128,151,193,115,88,63,107,87,2882,	0,29697,32213,33780,34660,39936,41824,42866,44085,45118,46368,46593,47477,48312,49602,52514,53597,54118,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57801745	57816308	0	14	250,464,184,118,154,69,128,151,193,115,88,63,107,2882,	0,39936,41824,42866,44085,45118,46368,46593,47477,48312,49602,52514,53597,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57801745	57816308	0	16	250,464,184,118,154,18,69,128,151,193,115,88,63,107,87,2882,	0,39936,41824,42866,44085,44664,45118,46368,46593,47477,48312,49602,52514,53597,54118,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57795612	57816308	0	18	250,72,153,536,464,184,118,154,18,69,128,151,193,115,88,63,107,2882,	0,32213,33780,34660,39936,41824,42866,44085,44664,45118,46368,46593,47477,48312,49602,52514,53597,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57791640	57816308	0	18	250,180,72,153,536,464,184,118,154,69,128,151,193,115,88,63,107,2882,	0,29697,32213,33780,34660,39936,41824,42866,44085,45118,46368,46593,47477,48312,49602,52514,53597,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57791640	57816308	0	19	323,119,180,72,153,536,464,184,118,154,69,128,151,193,115,88,63,107,2882,	0,27240,29697,32213,33780,34660,39936,41824,42866,44085,45118,46368,46593,47477,48312,49602,52514,53597,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57791640	57816308	0	18	250,180,72,153,536,464,184,118,154,69,128,151,193,115,88,107,87,2882,	0,29697,32213,33780,34660,39936,41824,42866,44085,45118,46368,46593,47477,48312,49602,53597,54118,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57795612	57816308	0	17	250,72,153,536,464,184,118,154,69,128,151,193,115,88,63,107,2882,	0,32213,33780,34660,39936,41824,42866,44085,45118,46368,46593,47477,48312,49602,52514,53597,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57795612	57816308	0	18	250,72,153,536,464,184,118,154,69,128,151,193,115,88,63,107,87,2882,	0,32213,33780,34660,39936,41824,42866,44085,45118,46368,46593,47477,48312,49602,52514,53597,54118,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57791640	57816308	0	19	250,180,72,153,536,464,184,118,154,18,69,128,151,193,115,88,63,107,2882,	0,29697,32213,33780,34660,39936,41824,42866,44085,44664,45118,46368,46593,47477,48312,49602,52514,53597,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57801745	57816308	0	15	250,464,184,118,154,69,128,151,193,115,88,63,107,87,2882,	0,39936,41824,42866,44085,45118,46368,46593,47477,48312,49602,52514,53597,54118,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57795612	57816308	0	16	250,153,536,464,184,118,154,69,128,151,193,115,88,63,107,2882,	0,33780,34660,39936,41824,42866,44085,45118,46368,46593,47477,48312,49602,52514,53597,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57795612	57816308	0	17	272,72,153,536,464,184,118,154,69,128,151,193,115,88,63,107,2882,	0,32213,33780,34660,39936,41824,42866,44085,45118,46368,46593,47477,48312,49602,52514,53597,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57791640	57816308	0	19	250,119,180,72,153,536,464,184,118,154,69,128,151,193,115,88,63,107,2882,	0,27240,29697,32213,33780,34660,39936,41824,42866,44085,45118,46368,46593,47477,48312,49602,52514,53597,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57795612	57816308	0	17	250,72,153,536,464,184,118,154,69,128,151,193,115,88,107,87,2882,	0,32213,33780,34660,39936,41824,42866,44085,45118,46368,46593,47477,48312,49602,53597,54118,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57791640	57816308	0	20	250,180,72,153,536,464,184,118,154,18,69,128,151,193,115,88,63,107,87,2882,	0,29697,32213,33780,34660,39936,41824,42866,44085,44664,45118,46368,46593,47477,48312,49602,52514,53597,54118,54500,
#Partially deleted in new
chr11	57761796	57819178	chr11:57761796-57819178	1	+	57801745	57816308	0	14	250,464,184,118,154,69,128,151,193,115,88,107,87,2882,	0,39936,41824,42866,44085,45118,46368,46593,47477,48312,49602,53597,54118,54500,
#Partially deleted in new
chr11	57761800	57819178	chr11:57761800-57819178	1	+	57791640	57816308	0	19	246,119,182,72,153,536,464,184,118,154,69,128,151,193,115,88,63,107,2882,	0,27236,29691,32209,33776,34656,39932,41820,42862,44081,45114,46364,46589,47473,48308,49598,52510,53593,54496,
#Partially deleted in new
chr11	57761817	57816717	chr11:57761817-57816717	1	+	57791478	57816308	0	18	229,289,72,153,536,464,184,118,154,18,69,128,151,193,115,88,107,421,	0,29567,32192,33759,34639,39915,41803,42845,44064,44643,45097,46347,46572,47456,48291,49581,53576,54479,
#Partially deleted in new
chr11	57763852	57791490	chr11:57763852-57791490	0	+	57791478	57791490	8553170	3	280,119,106,	0,25184,27532,
#Partially deleted in new
chr11	57781602	57796584	chr11:57781602-57796584	0	+	57791640	57796584	789624	5	44,182,72,153,128,	0,9889,12407,13974,14854,
#Partially deleted in new
chr11	57791558	57801794	chr11:57791558-57801794	0	+	57791640	57801794	789624	4	115,153,536,62,	0,4018,4898,10174,
#Partially deleted in new
chr11	57801994	57803990	chr11:57801994-57803990	0	+	57801994	57801994	8553170	2	202,370,	0,1626,
#Partially deleted in new
chr11	57806522	57808535	chr11:57806522-57808535	0	+	57806522	57806522	8553170	2	461,371,	0,1642,
#Partially deleted in new
chr11	57810144	57816011	chr11:57810144-57816011	0	+	57810144	57815533	789624	4	79,88,63,618,	0,1254,4166,5249,
#Partially deleted in new
chr11	57813916	57815481	chr11:57813916-57815481	0	+	57813916	57813916	8553170	2	457,88,	0,1477,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	57861947	57873588	chr11:57861947-57873588	7	-	57861947	57861947	16724991	3	5311,72,81,	0,5883,11560,
#Partially deleted in new
chr11	57866297	57867279	chr11:57866297-57867279	5	-	57866297	57866297	16724991	1	982,	0,
#Partially deleted in new
chr11	57870321	57870571	chr11:57870321-57870571	7	-	57870321	57870321	16724991	1	250,	0,
#Deleted in new
chr11	57917296	57918239	chr11:57917296-57918239	7	-	57917296	57917296	16724991	1	943,	0,
#Deleted in new
chr11	57945597	57946414	chr11:57945597-57946414	7	-	57945597	57945597	16724991	1	817,	0,
#Deleted in new
chr11	58005385	58005705	chr11:58005385-58005705	7	+	58005385	58005385	16724991	1	320,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	58023880	58181616	chr11:58023880-58181616	3	+	58179444	58180377	789624	3	224,78,2186,	0,31989,155550,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	58026705	58026812	chr11:58026705-58026812	3	-	58026705	58026705	8553170	1	107,	0,
#Deleted in new
chr11	58030929	58031931	chr11:58030929-58031931	3	+	58030952	58031906	789624	1	1002,	0,
#Deleted in new
chr11	58040707	58041660	chr11:58040707-58041660	7	-	58040707	58040707	16724991	1	953,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	58044109	58060138	chr11:58044109-58060138	3	-	58044109	58044109	8553170	4	1233,291,153,213,	0,3147,13573,15816,
#Partially deleted in new
chr11	58072377	58075438	chr11:58072377-58075438	7	-	58072377	58072377	16724991	2	1252,37,	0,3024,
#Partially deleted in new
chr11	58077347	58078603	chr11:58077347-58078603	7	-	58077347	58077347	16724991	2	518,415,	0,841,
#Deleted in new
chr11	58108719	58109661	chr11:58108719-58109661	7	-	58108719	58108719	16724991	1	942,	0,
#Partially deleted in new
chr11	58116741	58125530	chr11:58116741-58125530	1	-	58118499	58119444	789624	3	2725,202,257,	0,7696,8532,
#Partially deleted in new
chr11	58116741	58125530	chr11:58116741-58125530	3	-	58118499	58119444	789624	3	2725,202,100,	0,7696,8689,
#Deleted in new
chr11	58118499	58119444	chr11:58118499-58119444	1	-	58118499	58119444	789624	1	945,	0,
#Deleted in new
chr11	58144494	58145397	chr11:58144494-58145397	7	+	58144494	58144494	16724991	1	903,	0,
#Deleted in new
chr11	58171097	58171721	chr11:58171097-58171721	7	+	58171097	58171097	16724991	1	624,	0,
#Deleted in new
chr11	58179430	58181564	chr11:58179430-58181564	1	+	58179444	58180377	789624	1	2134,	0,
#Partially deleted in new
chr11	58189069	58194053	chr11:58189069-58194053	3	+	58190490	58191435	789624	2	39,3735,	0,1249,
#Deleted in new
chr11	58190433	58191518	chr11:58190433-58191518	1	+	58190490	58191435	789624	1	1085,	0,
#Deleted in new
chr11	58203201	58204142	chr11:58203201-58204142	1	-	58203203	58204142	789624	1	941,	0,
#Deleted in new
chr11	58203203	58204181	chr11:58203203-58204181	3	-	58203203	58204181	789624	1	978,	0,
#Deleted in new
chr11	58212719	58216084	chr11:58212719-58216084	1	+	58214783	58215722	789624	2	118,1356,	0,2009,
#Deleted in new
chr11	58214744	58215722	chr11:58214744-58215722	3	+	58214744	58215722	789624	1	978,	0,
#Deleted in new
chr11	58227881	58228918	chr11:58227881-58228918	3	-	58227915	58228875	789624	1	1037,	0,
#Partially deleted in new
chr11	58242042	58243097	chr11:58242042-58243097	7	-	58242042	58242042	16724991	1	1055,	0,
#Deleted in new
chr11	58266791	58268260	chr11:58266791-58268260	3	-	58266940	58267858	789624	1	1469,	0,
#Deleted in new
chr11	58291825	58292765	chr11:58291825-58292765	7	-	58291825	58291825	16724991	1	940,	0,
#Deleted in new
chr11	58317636	58318375	chr11:58317636-58318375	7	-	58317636	58317636	16724991	1	739,	0,
#Deleted in new
chr11	58343736	58344664	chr11:58343736-58344664	7	-	58343736	58343736	16724991	1	928,	0,
#Deleted in new
chr11	58348988	58349630	chr11:58348988-58349630	7	-	58348988	58348988	16724991	1	642,	0,
#Deleted in new
chr11	58354003	58354499	chr11:58354003-58354499	7	-	58354003	58354003	16724991	1	496,	0,
#Deleted in new
chr11	58358123	58359069	chr11:58358123-58359069	3	-	58358124	58359069	789624	1	946,	0,
#Deleted in new
chr11	58365835	58366763	chr11:58365835-58366763	7	-	58365835	58365835	16724991	1	928,	0,
#Deleted in new
chr11	58387582	58388486	chr11:58387582-58388486	7	-	58387582	58387582	16724991	1	904,	0,
#Partially deleted in new
chr11	58402463	58406874	chr11:58402463-58406874	3	-	58402464	58403409	789624	2	972,74,	0,4337,
#Deleted in new
chr11	58402464	58403409	chr11:58402464-58403409	1	-	58402464	58403409	789624	1	945,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	58421263	58428121	chr11:58421263-58428121	3	-	58422331	58423261	789624	3	2026,55,103,	0,5358,6755,
#Deleted in new
chr11	58422264	58423313	chr11:58422264-58423313	1	-	58422331	58423261	789624	1	1049,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	58439076	58442758	chr11:58439076-58442758	3	-	58439206	58440151	789624	2	1094,713,	0,2969,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	58439119	58440173	chr11:58439119-58440173	1	-	58439206	58440151	789624	1	1054,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	58497887	58503036	chr11:58497887-58503036	1	-	58497887	58497887	8553170	3	117,218,250,	0,285,4899,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	58497914	58505595	chr11:58497914-58505595	3	-	58497914	58497914	8553170	4	90,218,127,127,	0,258,5775,7554,
#Partially deleted in new
chr11	58497983	58505758	chr11:58497983-58505758	0	-	58497983	58497983	8553170	3	21,218,290,	0,189,7485,
#Deleted in new
chr11	58507174	58508105	chr11:58507174-58508105	3	-	58507175	58508105	789624	1	931,	0,
#Partially deleted in new
chr11	58526870	58575861	chr11:58526870-58575861	3	-	58527453	58575772	0	9	853,149,82,174,168,100,47,158,102,	0,1172,22915,23102,24194,27970,37284,43685,48889,
#Partially deleted in new
chr11	58526870	58578166	chr11:58526870-58578166	1	-	58527453	58578046	0	9	853,149,82,174,168,100,47,158,148,	0,1172,22915,23102,24194,27970,37284,43685,51148,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	58526870	58575836	chr11:58526870-58575836	0	-	58554142	58575772	789624	10	853,149,82,174,168,291,100,47,158,77,	0,1172,22915,23102,24194,26984,27970,37284,43685,48889,
#Partially deleted in new
chr11	58527038	58578220	chr11:58527038-58578220	1	-	58527453	58570713	789624	8	685,149,82,174,168,100,158,235,	0,1004,22747,22934,24026,27802,43517,50947,
#Partially deleted in new
chr11	58554754	58575883	chr11:58554754-58575883	0	-	58554754	58554754	8553170	4	186,47,158,124,	0,9400,15801,21005,
#Partially deleted in new
chr11	58579110	58621042	chr11:58579110-58621042	3	+	58579281	58617706	0	11	512,29,210,37,105,135,51,79,115,100,3847,	0,5745,30719,31187,31839,32493,33167,33651,35118,37605,38085,
#Partially deleted in new
chr11	58579171	58624566	chr11:58579171-58624566	3	+	58579281	58622780	789624	13	451,29,210,37,105,135,51,79,115,100,373,101,533,	0,5684,30658,31126,31778,32432,33106,33590,35057,37544,38024,43594,44862,
#Partially deleted in new
chr11	58609978	58624639	chr11:58609978-58624639	0	+	58609978	58622749	789624	11	61,37,105,135,51,79,115,100,373,126,606,	0,319,971,1625,2299,2783,4250,6737,7217,12762,14055,
#Deleted in new
chr11	58611118	58612642	chr11:58611118-58612642	3	-	58611118	58611118	8553170	1	1524,	0,
#Deleted in new
chr11	58622672	58625733	chr11:58622672-58625733	3	+	58622752	58624522	0	2	194,1700,	0,1361,
#Deleted in new
chr11	58627434	58628528	chr11:58627434-58628528	3	+	58627434	58627434	8553170	1	1094,	0,
#Partially deleted in new
chr11	58640425	58712849	chr11:58640425-58712849	0	-	58643130	58712849	789624	3	251,141,90,	0,2689,72334,
#Partially deleted in new
chr11	58685085	58691861	chr11:58685085-58691861	7	+	58685085	58685085	16724991	4	101,115,131,394,	0,242,3891,6382,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	58708757	58724496	chr11:58708757-58724496	1	-	58709765	58724496	789624	5	1411,172,127,108,81,	0,1832,4002,6558,15658,
#Partially deleted in new
chr11	58709063	58731961	chr11:58709063-58731961	3	-	58709765	58724496	789624	6	1105,172,127,108,96,127,	0,1526,3696,6252,15352,22771,
#Partially deleted in new
chr11	58709667	58728729	chr11:58709667-58728729	1	-	58709765	58724496	789624	6	501,172,127,108,96,66,	0,922,3092,5648,14748,18996,
#Partially deleted in new
chr11	58710082	58731974	chr11:58710082-58731974	1	-	58710585	58724496	789624	5	679,127,108,96,140,	0,2677,5233,14333,21752,
#Partially deleted in new
chr11	58724234	58731928	chr11:58724234-58731928	0	-	58724234	58724234	8553170	2	277,94,	0,7600,
#Partially deleted in new
chr11	58748998	58761053	chr11:58748998-58761053	7	-	58748998	58748998	16724991	4	398,171,133,81,	0,8505,9526,11974,
#Deleted in new
chr11	58796236	58796854	chr11:58796236-58796854	7	-	58796236	58796236	16724991	1	618,	0,
#Partially deleted in new
chr11	58834064	58844784	chr11:58834064-58844784	3	-	58834428	58839612	789624	6	773,163,127,108,118,351,	0,2950,3206,4196,5470,10369,
#Partially deleted in new
chr11	58834729	58904215	chr11:58834729-58904215	0	-	58834729	58834729	8553170	5	108,163,127,108,60,	0,2285,2541,3531,69426,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	58878301	58892972	chr11:58878301-58892972	7	+	58878301	58878301	16724991	3	80,119,311,	0,6604,14360,
#Partially deleted in new
chr11	58884946	58893460	chr11:58884946-58893460	5	+	58884946	58884946	16724991	5	78,106,127,173,418,	0,489,7270,7715,8096,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	58905397	58947937	chr11:58905397-58947937	0	+	58905397	58905397	8553170	3	264,124,80,	0,38145,42460,
#Deleted in new
chr11	58905423	58908598	chr11:58905423-58908598	0	+	58905423	58905423	8553170	2	238,1358,	0,1817,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	58917014	58928689	chr11:58917014-58928689	3	-	58917014	58917014	8553170	2	270,373,	0,11302,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	58927628	58954789	chr11:58927628-58954789	0	+	58947087	58954789	789624	5	201,124,120,108,20,	0,15914,19417,20229,27141,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	58927634	58955313	chr11:58927634-58955313	0	+	58943542	58955313	789624	7	195,45,124,23,108,127,138,	0,14905,15908,19411,20223,27135,27541,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	58927700	58956405	chr11:58927700-58956405	1	+	58947087	58956027	789624	8	129,45,124,120,108,127,178,796,	0,14839,15842,19345,20157,27069,27475,27909,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	58927712	58955319	chr11:58927712-58955319	0	+	58927712	58927712	8553170	6	117,124,23,108,127,144,	0,15830,19333,20145,27057,27463,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	58933642	59058659	chr11:58933642-59058659	3	-	58933642	58933642	5263520	6	2056,198,49,49,170,288,	0,45485,60360,117617,119814,124729,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	58939447	58954898	chr11:58939447-58954898	0	+	58939447	58939447	8553170	4	203,124,108,129,	0,4095,8410,15322,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	58939447	58947949	chr11:58939447-58947949	0	+	58943542	58947074	789624	5	203,45,124,120,92,	0,3092,4095,7598,8410,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	58939483	58954821	chr11:58939483-58954821	0	+	58947087	58954821	789624	5	167,124,120,108,52,	0,4059,7562,8374,15286,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	58943248	58957043	chr11:58943248-58957043	3	+	58943298	58956027	789624	7	74,124,23,108,127,178,1434,	0,294,3797,4609,11521,11927,12361,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	58943248	58956406	chr11:58943248-58956406	0	+	58943298	58947074	789624	7	74,124,120,108,127,178,797,	0,294,3797,4609,11521,11927,12361,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	58943259	58955656	chr11:58943259-58955656	0	+	58943298	58947931	789624	6	63,124,108,127,178,47,	0,283,4598,11510,11916,12350,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	58943286	58947475	chr11:58943286-58947475	0	+	58943286	58943286	8553170	3	36,124,430,	0,256,3759,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	58943311	58956430	chr11:58943311-58956430	0	+	58943542	58947074	789624	6	355,120,108,127,178,821,	0,3734,4546,11458,11864,12298,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	58943315	58947261	chr11:58943315-58947261	0	+	58943315	58943315	8553170	2	351,216,	0,3730,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	58943370	58955334	chr11:58943370-58955334	0	+	58943542	58947074	789624	6	90,124,120,108,127,159,	0,172,3675,4487,11399,11805,
#Partially deleted in new
chr11	58946783	58956403	chr11:58946783-58956403	0	+	58946783	58946783	8553170	4	1182,127,178,794,	0,7986,8392,8826,
#Partially deleted in new
chr11	58947045	59043527	chr11:58947045-59043527	0	+	58947045	58947045	8553170	2	120,28,	0,96454,
#Partially deleted in new
chr11	58947087	58956027	chr11:58947087-58956027	1	+	58947087	58956027	789624	5	78,108,127,178,418,	0,770,7682,8088,8522,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	58958216	58979285	chr11:58958216-58979285	1	-	58958216	58958216	8553170	3	604,132,158,	0,10725,20911,
#Deleted in new
chr11	58967595	58968291	chr11:58967595-58968291	7	-	58967595	58967595	16724991	1	696,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	58968952	59058450	chr11:58968952-59058450	0	-	58968952	58968952	8553170	5	121,49,170,152,79,	0,82307,84504,86342,89419,
#Partially deleted in new
chr11	58978786	58994120	chr11:58978786-58994120	7	+	58978786	58978786	16724991	4	122,108,133,1244,	0,529,13676,14090,
#Deleted in new
chr11	58995438	58999689	chr11:58995438-58999689	7	-	58995438	58995438	16724991	4	733,155,126,108,	0,2904,3152,4143,
#Partially deleted in new
chr11	59042736	59050971	chr11:59042736-59050971	7	+	59042736	59042736	16724991	5	78,108,127,178,415,	0,763,6980,7385,7820,
#Partially deleted in new
chr11	59086306	59094786	chr11:59086306-59094786	3	+	59086306	59094786	789624	5	78,108,127,178,418,	0,757,7222,7627,8062,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	59107184	59127410	chr11:59107184-59127410	1	+	59124187	59126302	789624	2	112,3232,	0,16994,
#Partially deleted in new
chr11	59107235	59110007	chr11:59107235-59110007	0	+	59107235	59107235	8553170	3	61,45,468,	0,1432,2304,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	59107235	59126436	chr11:59107235-59126436	1	+	59124187	59126302	789624	3	61,45,2258,	0,1432,16943,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	59107236	59127394	chr11:59107236-59127394	3	+	59109625	59126302	789624	4	60,45,167,3216,	0,1431,2303,16942,
#Partially deleted in new
chr11	59107236	59124675	chr11:59107236-59124675	0	+	59124187	59124675	789624	2	60,497,	0,16942,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	59109533	59127410	chr11:59109533-59127410	1	+	59109625	59126302	789624	2	173,3232,	0,14645,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	59130132	59142755	chr11:59130132-59142755	3	-	59130132	59130132	789624	5	168,1365,225,211,141,	0,4091,5924,9824,12482,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	59135289	59143015	chr11:59135289-59143015	0	-	59135289	59135289	8553170	4	299,225,211,145,	0,767,4667,7581,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	59135924	59140115	chr11:59135924-59140115	0	-	59135924	59135924	8553170	2	357,159,	0,4032,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	59139714	59142771	chr11:59139714-59142771	0	-	59139714	59139714	8553170	2	377,157,	0,2900,
#Partially deleted in new
chr11	59142120	59142610	chr11:59142120-59142610	7	-	59142120	59142120	16724991	1	490,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	59142747	59155039	chr11:59142747-59155039	3	+	59148872	59153504	789624	5	199,222,2360,118,3290,	0,335,749,6088,9002,
#Duplicated in new
chr11	59142844	59155034	chr11:59142844-59155034	1	+	59148872	59153504	789624	5	125,222,30,118,3285,	0,238,2982,5991,8905,
#Partially deleted in new
chr11	59142855	59148983	chr11:59142855-59148983	0	+	59142855	59142855	8553170	4	114,222,30,187,	0,227,2971,5941,
#Partially deleted in new
chr11	59142856	59143697	chr11:59142856-59143697	0	+	59142856	59142856	8553170	3	113,222,201,	0,226,640,
#Partially deleted in new
chr11	59142858	59143547	chr11:59142858-59143547	0	+	59142858	59142858	8553170	2	111,465,	0,224,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	59144778	59155036	chr11:59144778-59155036	1	+	59148872	59153504	789624	4	118,30,157,3287,	0,1048,4018,6971,
#Partially deleted in new
chr11	59144778	59152218	chr11:59144778-59152218	0	+	59148872	59152218	789624	4	118,30,250,469,	0,1048,3925,6971,
#Partially deleted in new
chr11	59144798	59151956	chr11:59144798-59151956	0	+	59148872	59151956	789624	3	98,118,207,	0,4037,6951,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	59144861	59149179	chr11:59144861-59149179	0	+	59144861	59144861	8553170	3	39,30,476,	0,965,3842,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	59145062	59155039	chr11:59145062-59155039	1	+	59148872	59153504	789624	3	794,118,3290,	0,3773,6687,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	59148244	59155036	chr11:59148244-59155036	1	+	59148872	59153504	789624	2	709,3287,	0,3505,
#Partially deleted in new
chr11	59171429	59204909	chr11:59171429-59204909	1	+	59181845	59204909	789624	9	59,724,62,162,62,153,162,90,234,	0,10309,17305,17732,19684,20668,23778,28254,33246,
#Partially deleted in new
chr11	59172491	59208587	chr11:59172491-59208587	3	+	59172595	59204909	789624	9	315,724,62,162,62,153,162,90,3912,	0,9247,16243,16670,18622,19606,22716,27192,32184,
#Partially deleted in new
chr11	59185259	59192251	chr11:59185259-59192251	0	+	59185259	59185259	8553170	5	54,62,162,62,154,	0,3475,3902,5854,6838,
#Partially deleted in new
chr11	59194891	59204758	chr11:59194891-59204758	0	+	59194891	59194891	8553170	3	478,90,83,	0,4792,9784,
#Partially deleted in new
chr11	59208509	59212951	chr11:59208509-59212951	3	-	59210714	59212865	789624	1	4442,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	59214405	59214699	chr11:59214405-59214699	3	-	59214405	59214405	8553170	1	294,	0,
#Partially deleted in new
chr11	59255359	59259486	chr11:59255359-59259486	7	+	59255359	59255359	16724991	3	192,138,124,	0,2431,4003,
#Deleted in new
chr11	59263388	59263802	chr11:59263388-59263802	7	-	59263388	59263388	16724991	1	414,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	59268875	59284033	chr11:59268875-59284033	3	-	59268875	59268875	8553170	2	2733,72,	0,15086,
#Deleted in new
chr11	59287338	59289486	chr11:59287338-59289486	7	-	59287338	59287338	16724991	1	2148,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	59291051	59291333	chr11:59291051-59291333	3	-	59291051	59291051	8553170	1	282,	0,
#Deleted in new
chr11	59309680	59310576	chr11:59309680-59310576	7	-	59309680	59309680	16724991	1	896,	0,
#Deleted in new
chr11	59332756	59334086	chr11:59332756-59334086	7	-	59332756	59332756	16724991	1	1330,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	59358894	59371714	chr11:59358894-59371714	1	+	59364458	59365394	789624	2	1199,7269,	0,5551,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	59358894	59371714	chr11:59358894-59371714	3	+	59364458	59365394	789624	2	378,7269,	0,5551,
#Deleted in new
chr11	59364411	59365448	chr11:59364411-59365448	1	+	59364458	59365394	789624	1	1037,	0,
#Deleted in new
chr11	59391353	59392292	chr11:59391353-59392292	7	-	59391353	59391353	16724991	1	939,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	59416968	59426412	chr11:59416968-59426412	1	-	59421978	59422953	789624	2	6076,242,	0,9202,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	59416968	59426412	chr11:59416968-59426412	1	-	59421978	59422953	789624	2	6413,242,	0,9202,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	59416968	59426412	chr11:59416968-59426412	3	-	59421978	59422953	789624	1	9444,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	59436468	59451380	chr11:59436468-59451380	3	+	59443168	59444116	789624	2	367,8245,	0,6667,
#Deleted in new
chr11	59443143	59444194	chr11:59443143-59444194	1	+	59443168	59444116	789624	1	1051,	0,
#Deleted in new
chr11	59456937	59457991	chr11:59456937-59457991	3	+	59456960	59457905	789624	1	1054,	0,
#Partially deleted in new
chr11	59473314	59479361	chr11:59473314-59479361	3	+	59477429	59478365	789624	3	327,55,2100,	0,424,3947,
#Deleted in new
chr11	59491651	59492581	chr11:59491651-59492581	7	+	59491651	59491651	16724991	1	930,	0,
#Deleted in new
chr11	59503575	59504511	chr11:59503575-59504511	3	+	59503575	59504511	789624	1	936,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	59511367	59520703	chr11:59511367-59520703	3	+	59514912	59515857	789624	3	151,91,5821,	0,3308,3515,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	59511538	59520703	chr11:59511538-59520703	1	+	59514912	59515857	789624	3	208,94,5821,	0,3134,3344,
#Deleted in new
chr11	59514912	59515857	chr11:59514912-59515857	1	+	59514912	59515857	789624	1	945,	0,
#Partially deleted in new
chr11	59531753	59532695	chr11:59531753-59532695	7	+	59531753	59531753	16724991	1	942,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	59561145	59566074	chr11:59561145-59566074	3	-	59561145	59561145	8553170	6	98,66,93,86,116,310,	0,1373,2668,3869,4307,4619,
#Partially deleted in new
chr11	59574397	59616144	chr11:59574397-59616144	3	-	59576576	59615664	0	14	2322,221,182,96,104,121,246,132,55,103,199,251,209,842,	0,2407,3751,5776,7053,19206,19612,26098,26421,26885,27242,34086,35983,40905,
#Partially deleted in new
chr11	59576832	59600856	chr11:59576832-59600856	0	-	59581455	59600856	789624	7	193,182,96,104,246,132,38,	0,1316,3341,4618,17177,23663,23986,
#Partially deleted in new
chr11	59593479	59600592	chr11:59593479-59600592	0	-	59593479	59593479	8553170	2	776,97,	0,7016,
#Partially deleted in new
chr11	59595076	59595158	chr11:59595076-59595158	3	-	59595076	59595076	5263520	1	82,	0,
#Partially deleted in new
chr11	59616428	59639542	chr11:59616428-59639542	3	+	59616428	59616428	8553170	4	46,58,113,223,	0,3986,18991,22891,
#Partially deleted in new
chr11	59620413	59639861	chr11:59620413-59639861	1	+	59620413	59620413	8553170	2	59,542,	0,18906,
#Partially deleted in new
chr11	59636715	59668980	chr11:59636715-59668980	3	-	59638389	59668895	0	19	1696,150,92,156,160,149,60,98,124,181,90,218,90,102,195,81,218,112,100,	0,2332,2576,6164,11038,12746,14038,14828,15748,16122,17267,18807,19240,19783,20814,22150,22536,30137,32165,
#Partially deleted in new
chr11	59642673	59647886	chr11:59642673-59647886	0	-	59642673	59642673	8553170	2	307,133,	0,5080,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	59669311	59675795	chr11:59669311-59675795	0	+	59669311	59669311	8553170	2	231,399,	0,6085,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	59674935	59676041	chr11:59674935-59676041	3	+	59674935	59674935	8553170	2	38,645,	0,461,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	59706056	59706383	chr11:59706056-59706383	3	-	59706056	59706056	8553170	1	327,	0,
#Deleted in new
chr11	59712915	59713845	chr11:59712915-59713845	3	-	59712915	59713845	789624	1	930,	0,
#Partially deleted in new
chr11	59713455	59802708	chr11:59713455-59802708	1	+	59773273	59797366	789624	12	335,177,84,100,75,68,109,74,135,111,114,1854,	0,15058,59755,73581,75417,77063,78651,79643,79924,81916,83827,87399,
#Deleted in new
chr11	59728518	59729492	chr11:59728518-59729492	7	+	59728518	59728518	16724991	1	974,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	59741324	59742049	chr11:59741324-59742049	7	+	59741324	59741324	16724991	1	725,	0,
#Deleted in new
chr11	59748810	59749574	chr11:59748810-59749574	7	+	59748810	59748810	16724991	1	764,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	59752577	59754718	chr11:59752577-59754718	3	-	59752577	59752577	8553170	2	1266,439,	0,1702,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	59753014	59754975	chr11:59753014-59754975	0	-	59753014	59753014	8553170	2	183,696,	0,1265,
#Partially deleted in new
chr11	59755058	59802706	chr11:59755058-59802706	3	+	59755605	59797366	789624	11	577,84,100,75,68,109,74,135,111,114,1852,	0,18152,31978,33814,35460,37048,38040,38321,40313,42224,45796,
#Partially deleted in new
chr11	59755375	59800962	chr11:59755375-59800962	0	+	59755605	59788890	789624	9	260,84,75,68,109,74,135,111,108,	0,17835,33497,35143,36731,37723,38004,40226,45479,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	59755397	59805882	chr11:59755397-59805882	1	+	59755605	59803295	789624	11	238,84,100,75,68,109,74,135,111,83,2034,	0,17813,31639,33475,35121,36709,37701,37982,40204,47820,48451,
#Partially deleted in new
chr11	59755451	59801485	chr11:59755451-59801485	1	+	59755605	59800902	789624	10	184,84,100,75,68,109,74,135,111,631,	0,17759,31585,33421,35067,36655,37647,37928,39920,45403,
#Partially deleted in new
chr11	59755458	59789201	chr11:59755458-59789201	0	+	59755458	59755458	8553170	4	177,84,100,329,	0,17752,31578,33414,
#Deleted in new
chr11	59781317	59781722	chr11:59781317-59781722	7	-	59781317	59781317	16724991	1	405,	0,
#Partially deleted in new
chr11	59787066	59797366	chr11:59787066-59797366	0	+	59787066	59797366	789624	7	70,75,68,109,74,135,84,	0,1806,3452,5040,6032,6313,10216,
#Partially deleted in new
chr11	59793478	59799947	chr11:59793478-59799947	1	+	59793478	59797366	789624	4	36,111,114,273,	0,1893,3804,6196,
#Partially deleted in new
chr11	59806134	59810872	chr11:59806134-59810872	3	-	59806346	59810658	0	4	698,149,66,269,	0,1566,3720,4469,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	59807235	59810022	chr11:59807235-59810022	0	-	59807235	59807235	8553170	3	614,140,168,	0,1497,2619,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	59809533	59810773	chr11:59809533-59810773	0	-	59809533	59809533	8553170	2	387,170,	0,1070,
#Partially deleted in new
chr11	59829267	59845501	chr11:59829267-59845501	3	-	59829483	59845453	0	9	278,119,202,178,182,141,114,177,127,	0,2410,6540,7906,11875,13175,13760,14611,16107,
#Partially deleted in new
chr11	59829274	59845499	chr11:59829274-59845499	0	-	59845306	59845453	789624	9	271,119,202,178,182,141,114,177,239,	0,2403,6533,7899,11868,13168,13753,14604,15986,
#Partially deleted in new
chr11	59831530	59835927	chr11:59831530-59835927	0	-	59831530	59831530	8553170	2	266,120,	0,4277,
#Partially deleted in new
chr11	59835787	59841321	chr11:59835787-59841321	0	-	59835787	59835787	8553170	3	222,178,345,	0,1386,5189,
#Partially deleted in new
chr11	59842466	59845499	chr11:59842466-59845499	0	-	59842466	59842466	8553170	3	675,177,125,	0,1412,2908,
#Partially deleted in new
chr11	59852799	59866575	chr11:59852799-59866575	3	-	59852974	59866470	0	9	237,119,184,190,191,156,141,180,184,	0,403,1852,3069,6277,8727,9782,11107,13592,
#Partially deleted in new
chr11	59852799	59854767	chr11:59852799-59854767	0	-	59852799	59852799	8553170	3	237,119,120,	0,403,1848,
#Partially deleted in new
chr11	59854665	59866489	chr11:59854665-59866489	0	-	59854665	59854665	8553170	5	170,156,141,180,98,	0,6861,7916,9241,11726,
#Partially deleted in new
chr11	59855942	59866471	chr11:59855942-59866471	0	-	59855942	59855942	8553170	5	116,191,156,141,80,	0,3134,5584,6639,10449,
#Partially deleted in new
chr11	59859181	59862635	chr11:59859181-59862635	0	-	59859181	59859181	8553170	3	86,153,54,	0,2345,3400,
#Partially deleted in new
chr11	59878808	59896481	chr11:59878808-59896481	3	+	59878808	59896213	789624	5	73,179,98,151,349,	0,1452,15270,16693,17324,
#Deleted in new
chr11	59898184	59899133	chr11:59898184-59899133	7	+	59898184	59898184	16724991	1	949,	0,
#Partially deleted in new
chr11	59938431	59949026	chr11:59938431-59949026	3	+	59938454	59948822	789624	5	99,182,98,130,321,	0,4415,6737,9301,10274,
#Partially deleted in new
chr11	59938431	59957480	chr11:59938431-59957480	1	+	59938454	59957263	789624	5	99,182,98,130,286,	0,4415,6737,9301,18763,
#Partially deleted in new
chr11	59942878	59970146	chr11:59942878-59970146	3	+	59942878	59942878	789624	7	150,98,130,179,98,135,98,	0,2290,4854,22656,24188,26271,27170,
#Partially deleted in new
chr11	59964032	59970146	chr11:59964032-59970146	3	+	59964032	59970124	789624	5	67,179,98,135,98,	0,1502,3034,5117,6016,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	59978019	60031077	chr11:59978019-60031077	0	+	59978019	59978019	8553170	10	141,119,233,111,145,30,182,98,148,276,	0,33651,39161,41450,43446,44265,45860,46888,51762,52782,
#Partially deleted in new
chr11	60017180	60031077	chr11:60017180-60031077	3	+	60017391	60030834	789624	5	233,182,98,148,276,	0,6699,7727,12601,13621,
#Partially deleted in new
chr11	60022066	60031077	chr11:60022066-60031077	0	+	60022066	60022066	8553170	5	248,182,98,148,276,	0,1813,2841,7715,8735,
#Partially deleted in new
chr11	60040274	60048044	chr11:60040274-60048044	3	+	60040459	60047073	789624	4	249,179,104,1101,	0,3194,4396,6669,
#Partially deleted in new
chr11	60040459	60043733	chr11:60040459-60043733	0	+	60040459	60040459	8553170	2	64,265,	0,3009,
#Partially deleted in new
chr11	60040488	60046891	chr11:60040488-60046891	1	+	60043497	60046720	789624	4	35,179,104,178,	0,2980,4182,6225,
#Partially deleted in new
chr11	60056586	60070595	chr11:60056586-60070595	1	+	60066968	60070233	789624	5	154,57,162,102,392,	0,7675,10364,12987,13617,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	60056627	60071114	chr11:60056627-60071114	1	+	60061160	60070233	789624	6	113,171,57,162,102,911,	0,4518,7634,10323,12946,13576,
#Partially deleted in new
chr11	60056627	60062669	chr11:60056627-60062669	0	+	60056627	60056627	8553170	3	113,171,202,	0,4518,5840,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	60056682	60071128	chr11:60056682-60071128	3	+	60061160	60070233	789624	7	58,171,138,57,162,102,925,	0,4463,5785,7579,10268,12891,13521,
#Partially deleted in new
chr11	60061160	60070233	chr11:60061160-60070233	1	+	60061160	60070233	789624	5	156,57,162,102,30,	0,3101,5790,8413,9043,
#Deleted in new
chr11	60069530	60070981	chr11:60069530-60070981	0	+	60069530	60069530	8553170	2	145,778,	0,673,
#Partially deleted in new
chr11	60077349	60078401	chr11:60077349-60078401	7	+	60077349	60077349	16724991	2	382,355,	0,697,
#Deleted in new
chr11	60088260	60089759	chr11:60088260-60089759	0	+	60088765	60089759	789624	3	401,72,68,	0,489,1431,
#Partially deleted in new
chr11	60088663	60095971	chr11:60088663-60095971	3	+	60088765	60095656	789624	7	158,130,135,57,159,99,414,	0,1028,1672,4128,4736,5300,6894,
#Partially deleted in new
chr11	60088663	60094031	chr11:60088663-60094031	0	+	60088663	60088663	8553170	5	158,130,135,57,632,	0,1028,1672,4128,4736,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	60088663	60098466	chr11:60088663-60098466	1	+	60088765	60095656	789624	6	158,130,57,159,99,2909,	0,1028,4128,4736,5300,6894,
#Deleted in new
chr11	60159686	60160822	chr11:60159686-60160822	3	-	60159686	60159686	8553170	3	183,104,98,	0,592,1038,
#Partially deleted in new
chr11	60172013	60183104	chr11:60172013-60183104	1	-	60173000	60181727	789624	6	1116,210,57,135,161,127,	0,3388,6246,7817,9567,10964,
#Partially deleted in new
chr11	60172014	60183040	chr11:60172014-60183040	1	-	60173037	60181727	789624	7	239,102,106,57,135,161,63,	0,1013,3491,6245,7816,9566,10963,
#Partially deleted in new
chr11	60172014	60184666	chr11:60172014-60184666	3	-	60172157	60181727	789624	8	239,102,210,57,135,161,354,125,	0,1013,3387,6245,7816,9566,10963,12527,
#Partially deleted in new
chr11	60172018	60181666	chr11:60172018-60181666	0	-	60173037	60181666	789624	5	235,102,106,57,86,	0,1009,3487,6241,9562,
#Partially deleted in new
chr11	60172019	60178353	chr11:60172019-60178353	0	-	60172019	60172019	8553170	4	234,102,210,94,	0,1008,3382,6240,
#Partially deleted in new
chr11	60172046	60184633	chr11:60172046-60184633	1	-	60172157	60183205	789624	8	207,102,210,57,135,161,196,92,	0,981,3355,6213,7784,9534,11089,12495,
#Partially deleted in new
chr11	60172496	60183223	chr11:60172496-60183223	1	-	60173000	60183205	789624	6	633,210,57,135,161,88,	0,2905,5763,7334,9084,10639,
#Partially deleted in new
chr11	60172499	60184666	chr11:60172499-60184666	1	-	60173000	60183205	789624	7	630,210,57,135,161,196,347,	0,2902,5760,7331,9081,10636,11820,
#Partially deleted in new
chr11	60172670	60183031	chr11:60172670-60183031	1	-	60173037	60181727	789624	4	459,106,161,54,	0,2835,8910,10307,
#Partially deleted in new
chr11	60173027	60183067	chr11:60173027-60183067	0	-	60178270	60181727	789624	7	102,210,57,35,135,161,90,	0,2374,5232,5766,6803,8553,9950,
#Deleted in new
chr11	60177018	60179965	chr11:60177018-60179965	0	-	60177018	60177018	8553170	3	397,57,135,	0,1241,2812,
#Deleted in new
chr11	60177978	60183030	chr11:60177978-60183030	0	-	60177978	60177978	8553170	3	338,161,53,	0,3602,4999,
#Deleted in new
chr11	60178170	60183083	chr11:60178170-60183083	0	-	60178170	60178170	8553170	4	146,135,161,106,	0,1660,3410,4807,
#Deleted in new
chr11	60179490	60183142	chr11:60179490-60183142	0	-	60179490	60179490	8553170	2	2251,165,	0,3487,
#Deleted in new
chr11	60179490	60184418	chr11:60179490-60184418	1	-	60179686	60181727	789624	4	475,161,354,146,	0,2090,3487,4782,
#Deleted in new
chr11	60179893	60184420	chr11:60179893-60184420	0	-	60179893	60183205	789624	4	72,161,196,148,	0,1687,3242,4379,
#Deleted in new
chr11	60181411	60182558	chr11:60181411-60182558	0	-	60181411	60181411	8553170	2	330,241,	0,906,
#Deleted in new
chr11	60181580	60184513	chr11:60181580-60184513	0	-	60181580	60183205	789624	3	161,196,210,	0,1555,2723,
#Deleted in new
chr11	60181658	60183966	chr11:60181658-60183966	0	-	60181658	60181727	789624	3	83,354,245,	0,1319,2063,
#Deleted in new
chr11	60182804	60183743	chr11:60182804-60183743	0	-	60182804	60182804	8553170	2	527,22,	0,917,
#Deleted in new
chr11	60183169	60184666	chr11:60183169-60184666	0	-	60183169	60183169	8553170	2	162,347,	0,1150,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	60201252	60243088	chr11:60201252-60243088	0	-	60225058	60230055	789624	6	627,44,129,34,160,131,	0,13318,23712,27341,28659,41705,
#Partially deleted in new
chr11	60206672	60230071	chr11:60206672-60230071	3	-	60206674	60230055	789624	5	74,102,57,129,160,	0,1920,7898,18292,23239,
#Deleted in new
chr11	60209070	60209156	chr11:60209070-60209156	3	-	60209070	60209070	5263520	1	86,	0,
#Partially deleted in new
chr11	60213088	60230055	chr11:60213088-60230055	1	-	60213250	60230055	789624	5	44,118,44,129,144,	0,126,1482,11876,16823,
#Partially deleted in new
chr11	60213088	60230055	chr11:60213088-60230055	1	-	60213250	60230055	789624	4	44,118,44,144,	0,126,1482,16823,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	60213088	60230044	chr11:60213088-60230044	0	-	60225058	60230044	789624	5	44,44,129,34,133,	0,1482,11876,15505,16823,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	60213088	60230050	chr11:60213088-60230050	0	-	60225058	60230050	789624	6	44,118,44,129,34,139,	0,126,1482,11876,15505,16823,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	60213094	60230055	chr11:60213094-60230055	1	-	60213221	60230055	789624	4	238,44,34,144,	0,1476,15499,16817,
#Partially deleted in new
chr11	60213094	60230055	chr11:60213094-60230055	1	-	60213250	60230055	789624	4	238,44,129,144,	0,1476,11870,16817,
#Partially deleted in new
chr11	60280540	60308180	chr11:60280540-60308180	1	+	60280675	60308178	789624	6	176,160,129,57,102,74,	0,11684,16656,20460,25559,27566,
#Partially deleted in new
chr11	60280585	60308972	chr11:60280585-60308972	3	+	60280675	60308178	789624	7	131,160,129,57,159,102,866,	0,11639,16611,20415,21973,25514,27521,
#Partially deleted in new
chr11	60280655	60308968	chr11:60280655-60308968	0	+	60280675	60292244	789624	8	61,146,160,129,57,159,102,862,	0,1938,11569,16541,20345,21903,25444,27451,
#Partially deleted in new
chr11	60280668	60302717	chr11:60280668-60302717	0	+	60280675	60292244	789624	7	48,146,160,152,129,57,159,	0,1925,11556,16202,16528,20332,21890,
#Partially deleted in new
chr11	60280684	60302644	chr11:60280684-60302644	0	+	60280684	60290124	789624	6	32,194,160,129,57,86,	0,9364,11540,16512,20316,21874,
#Partially deleted in new
chr11	60305732	60308364	chr11:60305732-60308364	0	+	60305732	60305732	8553170	2	469,258,	0,2374,
#Partially deleted in new
chr11	60334830	60340968	chr11:60334830-60340968	3	+	60334895	60339955	789624	4	212,207,99,193,	0,2910,5035,5945,
#Partially deleted in new
chr11	60334970	60396596	chr11:60334970-60396596	0	+	60334970	60339955	789624	5	72,207,99,153,35,	0,2770,4895,5805,61591,
#Partially deleted in new
chr11	60334976	60338700	chr11:60334976-60338700	0	+	60334976	60335643	789624	4	66,120,106,191,	0,553,2764,3533,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	60378481	60394811	chr11:60378481-60394811	3	+	60383141	60393861	789624	7	183,160,135,57,207,102,1025,	0,4647,6606,8235,10908,14203,15305,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	60378484	60395951	chr11:60378484-60395951	1	+	60383141	60393861	789624	6	180,160,57,207,102,2165,	0,4644,8232,10905,14200,15302,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	60378500	60394522	chr11:60378500-60394522	1	+	60383141	60393861	789624	6	116,160,57,207,102,736,	0,4628,8216,10889,14184,15286,
#Partially deleted in new
chr11	60378527	60393813	chr11:60378527-60393813	0	+	60383141	60393813	789624	5	137,160,207,102,27,	0,4601,10862,14157,15259,
#Partially deleted in new
chr11	60378527	60392780	chr11:60378527-60392780	0	+	60383141	60392780	789624	5	137,160,57,207,96,	0,4601,8189,10862,14157,
#Partially deleted in new
chr11	60378529	60417688	chr11:60378529-60417688	1	+	60402929	60417008	789624	3	135,150,2252,	0,24382,36907,
#Partially deleted in new
chr11	60378531	60389985	chr11:60378531-60389985	0	+	60378531	60378531	8553170	4	133,160,57,596,	0,4597,8185,10858,
#Partially deleted in new
chr11	60378538	60395254	chr11:60378538-60395254	1	+	60383141	60394960	789624	4	126,160,135,309,	0,4590,6549,16407,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	60378548	60383666	chr11:60378548-60383666	0	+	60378548	60378548	8553170	2	116,538,	0,4580,
#Partially deleted in new
chr11	60378563	60386774	chr11:60378563-60386774	0	+	60383228	60386774	789624	3	101,109,58,	0,4616,8153,
#Partially deleted in new
chr11	60386499	60392786	chr11:60386499-60392786	0	+	60386499	60386499	8553170	3	274,207,102,	0,2890,6185,
#Partially deleted in new
chr11	60389035	60393977	chr11:60389035-60393977	0	+	60389035	60389035	8553170	2	561,191,	0,4751,
#Partially deleted in new
chr11	60389181	60393977	chr11:60389181-60393977	0	+	60389181	60389181	8553170	3	415,102,191,	0,3503,4605,
#Partially deleted in new
chr11	60396013	60417756	chr11:60396013-60417756	1	+	60396578	60417008	789624	5	703,129,150,99,2320,	0,1838,6898,9875,19423,
#Partially deleted in new
chr11	60396301	60417688	chr11:60396301-60417688	3	+	60396578	60417008	789624	5	415,129,51,150,2252,	0,1550,4102,6610,19135,
#Partially deleted in new
chr11	60396434	60417688	chr11:60396434-60417688	1	+	60396578	60417008	789624	4	282,129,150,2252,	0,1417,6477,19002,
#Partially deleted in new
chr11	60396464	60405916	chr11:60396464-60405916	0	+	60396578	60405916	789624	4	252,129,150,28,	0,1387,6447,9424,
#Partially deleted in new
chr11	60396467	60417685	chr11:60396467-60417685	0	+	60396578	60404590	789624	5	249,129,150,121,2249,	0,1384,6444,8078,18969,
#Partially deleted in new
chr11	60396467	60417685	chr11:60396467-60417685	0	+	60396578	60404590	789624	6	249,129,150,121,99,2249,	0,1384,6444,8078,9421,18969,
#Partially deleted in new
chr11	60396479	60417563	chr11:60396479-60417563	0	+	60396578	60404590	789624	6	237,129,51,150,121,2127,	0,1372,3924,6432,8066,18957,
#Partially deleted in new
chr11	60396487	60417688	chr11:60396487-60417688	1	+	60396578	60417008	789624	6	229,129,51,150,99,2252,	0,1364,3916,6424,9401,18949,
#Deleted in new
chr11	60396495	60400452	chr11:60396495-60400452	0	+	60396578	60397998	789624	3	221,320,49,	0,1356,3908,
#Partially deleted in new
chr11	60396702	60403168	chr11:60396702-60403168	0	+	60396702	60403136	789624	4	14,129,51,257,	0,1149,3701,6209,
#Partially deleted in new
chr11	60429588	60447792	chr11:60429588-60447792	3	+	60429674	60447759	789624	5	239,129,57,153,144,	0,1207,2822,4176,18060,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	60429604	60455214	chr11:60429604-60455214	0	+	60429674	60435412	789624	5	223,129,57,109,66,	0,1191,2806,5802,25544,
#Partially deleted in new
chr11	60429620	60433887	chr11:60429620-60433887	0	+	60429620	60429620	8553170	4	207,26,57,123,	0,1278,2790,4144,
#Partially deleted in new
chr11	60429642	60447792	chr11:60429642-60447792	0	+	60429674	60432435	789624	5	185,26,57,68,144,	0,1256,2768,4207,18006,
#Partially deleted in new
chr11	60429754	60447792	chr11:60429754-60447792	0	+	60429754	60447759	789624	4	73,129,57,144,	0,1041,2656,17894,
#Partially deleted in new
chr11	60429775	60447792	chr11:60429775-60447792	0	+	60429775	60432435	789624	4	52,26,57,144,	0,1123,2635,17873,
#Partially deleted in new
chr11	60455751	60462396	chr11:60455751-60462396	0	+	60462374	60462396	789624	3	194,89,212,	0,5320,6433,
#Partially deleted in new
chr11	60455808	60470752	chr11:60455808-60470752	3	+	60462374	60468468	0	7	137,175,120,57,237,102,2503,	0,6550,7193,8479,10112,11150,12441,
#Partially deleted in new
chr11	60455845	60462393	chr11:60455845-60462393	0	+	60462374	60462393	8553170	4	100,160,89,209,	0,2203,5226,6339,
#Partially deleted in new
chr11	60455846	60463805	chr11:60455846-60463805	0	+	60455846	60455846	8553170	6	99,89,114,116,120,44,	0,5225,6338,6571,7155,7915,
#Partially deleted in new
chr11	60455846	60470058	chr11:60455846-60470058	1	+	60462374	60468468	789624	7	99,175,120,57,237,63,1809,	0,6512,7155,8441,10074,11151,12403,
#Partially deleted in new
chr11	60455846	60470760	chr11:60455846-60470760	1	+	60462374	60468468	0	7	99,349,120,57,237,102,2511,	0,6338,7155,8441,10074,11112,12403,
#Partially deleted in new
chr11	60455850	60468892	chr11:60455850-60468892	1	+	60462374	60468468	0	4	95,127,63,643,	0,6508,11147,12399,
#Partially deleted in new
chr11	60455858	60465944	chr11:60455858-60465944	0	+	60462246	60465944	789624	7	87,89,114,116,120,57,24,	0,5213,6326,6559,7143,8429,10062,
#Partially deleted in new
chr11	60455858	60464312	chr11:60455858-60464312	0	+	60455858	60455858	8553170	4	87,175,120,551,	0,6500,7143,7903,
#Partially deleted in new
chr11	60462180	60470752	chr11:60462180-60470752	1	+	60462374	60468468	0	6	353,120,57,237,102,2503,	0,821,2107,3740,4778,6069,
#Partially deleted in new
chr11	60465759	60468331	chr11:60465759-60468331	0	+	60465759	60465759	8553170	3	398,102,82,	0,1199,2490,
#Partially deleted in new
chr11	60466596	60468269	chr11:60466596-60468269	0	+	60466596	60466596	8553170	2	464,20,	0,1653,
#Partially deleted in new
chr11	60492777	60507430	chr11:60492777-60507430	3	+	60497318	60507124	789624	7	51,282,138,57,117,111,411,	0,4535,8267,9205,10923,13950,14242,
#Partially deleted in new
chr11	60492777	60498062	chr11:60492777-60498062	0	+	60492777	60492777	8553170	3	51,113,750,	0,142,4535,
#Partially deleted in new
chr11	60492777	60506798	chr11:60492777-60506798	0	+	60497318	60506798	789624	5	51,282,57,117,71,	0,4535,9205,10923,13950,
#Partially deleted in new
chr11	60492777	60507420	chr11:60492777-60507420	1	+	60497318	60507124	789624	6	51,282,57,117,111,401,	0,4535,9205,10923,13950,14242,
#Partially deleted in new
chr11	60492799	60501111	chr11:60492799-60501111	0	+	60497318	60501111	789624	3	233,282,67,	0,4513,8245,
#Partially deleted in new
chr11	60515412	60542721	chr11:60515412-60542721	1	+	60518083	60542575	789624	6	195,116,141,57,96,203,	0,556,2659,8484,13952,27106,
#Partially deleted in new
chr11	60515412	60542721	chr11:60515412-60542721	3	+	60518083	60542575	789624	7	195,116,141,57,120,96,203,	0,556,2659,8484,9794,13952,27106,
#Partially deleted in new
chr11	60515412	60542721	chr11:60515412-60542721	1	+	60518083	60542575	789624	5	195,116,141,96,203,	0,556,2659,13952,27106,
#Partially deleted in new
chr11	60515538	60542621	chr11:60515538-60542621	1	+	60518083	60542575	789624	3	546,141,103,	0,2533,26980,
#Partially deleted in new
chr11	60577855	60608418	chr11:60577855-60608418	7	+	60577855	60577855	16724991	4	145,57,119,40,	0,10936,28062,30523,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	60615728	60687262	chr11:60615728-60687262	7	+	60615728	60615728	16724991	9	124,98,120,143,95,298,144,54,353,	0,5292,12560,33439,37960,41374,42998,44993,71181,
#Partially deleted in new
chr11	60615735	60687149	chr11:60615735-60687149	4	+	60615735	60615735	16724991	6	117,98,120,143,54,240,	0,5285,12553,33432,44986,71174,
#Partially deleted in new
chr11	60615735	60687267	chr11:60615735-60687267	5	+	60615735	60615735	16724991	8	117,98,120,143,95,144,54,358,	0,5285,12553,33432,37953,42991,44986,71174,
#Partially deleted in new
chr11	60615743	60687262	chr11:60615743-60687262	4	+	60615743	60615743	16724991	10	109,98,120,143,95,144,41,110,121,353,	0,5277,12545,33424,37945,42983,44991,59395,64159,71166,
#Partially deleted in new
chr11	60615750	60687149	chr11:60615750-60687149	4	+	60615750	60615750	16724991	7	102,98,120,143,95,54,240,	0,5270,12538,33417,37938,44971,71159,
#Partially deleted in new
chr11	60647280	60687149	chr11:60647280-60687149	4	+	60647280	60647280	16724991	4	312,143,54,240,	0,1887,13441,39629,
#Partially deleted in new
chr11	60653717	60687149	chr11:60653717-60687149	4	+	60653717	60653717	16724991	4	66,54,110,240,	0,7004,21421,33192,
#Partially deleted in new
chr11	60653738	60686983	chr11:60653738-60686983	5	+	60653738	60653738	16724991	6	45,144,41,110,121,74,	0,4988,6996,21400,26164,33171,
#Partially deleted in new
chr11	60699573	60715811	chr11:60699573-60715811	3	+	60700860	60715414	789624	7	202,220,123,60,132,114,502,	0,1286,3804,7414,9076,15447,15736,
#Partially deleted in new
chr11	60699584	60709206	chr11:60699584-60709206	0	+	60699584	60699584	8553170	5	191,220,223,60,557,	0,1275,3693,7403,9065,
#Partially deleted in new
chr11	60699585	60709219	chr11:60699585-60709219	0	+	60699585	60699585	8553170	5	190,220,123,60,570,	0,1274,3792,7402,9064,
#Partially deleted in new
chr11	60699656	60709065	chr11:60699656-60709065	0	+	60699656	60699656	8553170	4	119,473,60,416,	0,3371,7331,8993,
#Partially deleted in new
chr11	60699693	60708863	chr11:60699693-60708863	0	+	60699693	60699693	8553170	5	82,103,123,60,214,	0,1283,3684,7294,8956,
#Partially deleted in new
chr11	60699702	60715386	chr11:60699702-60715386	0	+	60700860	60715386	789624	7	73,220,123,60,79,114,77,	0,1157,3675,7285,8947,15318,15607,
#Partially deleted in new
chr11	60699746	60703486	chr11:60699746-60703486	0	+	60700860	60701331	789624	4	29,220,190,109,	0,1113,1537,3631,
#Partially deleted in new
chr11	60699754	60701527	chr11:60699754-60701527	0	+	60699754	60699754	8553170	3	21,220,244,	0,1105,1529,
#Partially deleted in new
chr11	60700915	60712027	chr11:60700915-60712027	0	+	60700915	60711841	789624	5	164,123,60,132,198,	0,2462,6072,7734,10914,
#Partially deleted in new
chr11	60729303	60744212	chr11:60729303-60744212	3	+	60729315	60743994	789624	6	489,114,57,96,114,563,	0,4230,7674,9598,11726,14346,
#Partially deleted in new
chr11	60729315	60743766	chr11:60729315-60743766	1	+	60729315	60743766	789624	6	471,114,57,96,114,117,	0,4218,7662,9586,11714,14334,
#Partially deleted in new
chr11	60756952	60775799	chr11:60756952-60775799	1	+	60763733	60775715	789624	6	106,253,57,93,114,195,	0,6753,14338,16439,16884,18652,
#Partially deleted in new
chr11	60757002	60776731	chr11:60757002-60776731	1	+	60767586	60775715	789624	6	56,89,57,93,114,1127,	0,10564,14288,16389,16834,18602,
#Partially deleted in new
chr11	60757003	60776732	chr11:60757003-60776732	0	+	60763733	60771630	789624	8	55,253,89,57,321,93,114,1128,	0,6702,10563,14287,14434,16388,16833,18601,
#Partially deleted in new
chr11	60757007	60776731	chr11:60757007-60776731	3	+	60763733	60775715	789624	7	51,253,123,57,93,114,1127,	0,6698,10525,14283,16384,16829,18597,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	60785347	60801305	chr11:60785347-60801305	3	+	60790335	60799909	789624	8	74,205,120,57,132,111,119,1478,	0,4966,5626,6917,8624,10207,13048,14480,
#Partially deleted in new
chr11	60813931	60821739	chr11:60813931-60821739	3	-	60813931	60813931	8553170	3	189,123,43,	0,7342,7765,
#Partially deleted in new
chr11	60835995	60842965	chr11:60835995-60842965	3	-	60835995	60835995	8553170	2	152,349,	0,6621,
#Partially deleted in new
chr11	60841805	60851081	chr11:60841805-60851081	3	-	60841805	60841805	8553170	2	175,316,	0,8960,
#Partially deleted in new
chr11	60842070	60851081	chr11:60842070-60851081	3	+	60842124	60850325	789624	4	812,130,75,876,	0,5853,7869,8135,
#Partially deleted in new
chr11	60842144	60851046	chr11:60842144-60851046	0	+	60842144	60842705	789624	5	260,182,130,75,841,	0,556,5779,7795,8061,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	60846432	60851076	chr11:60846432-60851076	0	+	60846432	60846432	8553170	3	1621,75,871,	0,3507,3773,
#Deleted in new
chr11	60847472	60850546	chr11:60847472-60850546	1	+	60847933	60850325	789624	4	151,130,75,341,	0,451,2467,2733,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	60850939	60855971	chr11:60850939-60855971	3	-	60852534	60853722	789624	2	2792,103,	0,4929,
#Partially deleted in new
chr11	60867561	60875693	chr11:60867561-60875693	3	+	60867561	60875656	789624	12	196,122,364,144,188,98,128,190,142,82,120,180,	0,1583,1975,2770,3395,3655,5600,5813,6072,7371,7567,7952,
#Deleted in new
chr11	60869156	60871120	chr11:60869156-60871120	0	+	60869156	60870343	789624	3	110,144,164,	0,1175,1800,
#Partially deleted in new
chr11	60870511	60875693	chr11:60870511-60875693	0	+	60870511	60870511	8553170	8	633,98,128,190,142,82,120,180,	0,705,2650,2863,3122,4421,4617,5002,
#Partially deleted in new
chr11	60870840	60873281	chr11:60870840-60873281	0	+	60870840	60870840	8553170	3	304,98,71,	0,376,2370,
#Deleted in new
chr11	60873124	60874971	chr11:60873124-60874971	0	+	60873124	60873124	8553170	4	165,190,142,39,	0,250,509,1808,
#Partially deleted in new
chr11	60890729	60906588	chr11:60890729-60906588	3	-	60891165	60906382	0	16	534,106,171,86,70,156,110,76,75,42,63,74,142,77,150,225,	0,7116,7371,7811,8132,8419,9852,10124,10565,10769,11673,11853,12010,12729,12982,15634,
#Partially deleted in new
chr11	60890735	60902414	chr11:60890735-60902414	0	-	60890766	60902414	789624	4	55,60,42,12,	0,10574,10763,11667,
#Partially deleted in new
chr11	60890746	60898931	chr11:60890746-60898931	0	-	60891165	60898931	789624	4	517,106,86,70,	0,7099,7794,8115,
#Deleted in new
chr11	60897549	60899215	chr11:60897549-60899215	0	-	60897549	60897549	8553170	5	402,171,86,70,67,	0,551,991,1312,1599,
#Deleted in new
chr11	60897879	60898469	chr11:60897879-60898469	0	-	60897879	60897879	8553170	2	72,369,	0,221,
#Partially deleted in new
chr11	60898540	60906569	chr11:60898540-60906569	0	-	60898540	60906382	789624	10	38,76,75,42,63,74,142,77,150,206,	0,2313,2754,2958,3862,4042,4199,4918,5171,7823,
#Partially deleted in new
chr11	60901498	60906541	chr11:60901498-60906541	0	-	60901498	60902872	789624	8	42,63,74,142,77,150,88,178,	0,904,1084,1241,1960,2213,3866,4865,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	60906788	60909742	chr11:60906788-60909742	3	+	60906788	60906788	8553170	2	494,316,	0,2638,
#Partially deleted in new
chr11	60913873	60923443	chr11:60913873-60923443	3	+	60919693	60922165	789624	4	395,245,103,1670,	0,5812,7012,7900,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	60918468	60925397	chr11:60918468-60925397	3	-	60918468	60918468	8553170	2	685,179,	0,6750,
#Partially deleted in new
chr11	60919677	60923376	chr11:60919677-60923376	1	+	60919693	60922165	789624	3	253,103,1603,	0,1208,2096,
#Deleted in new
chr11	60922617	60923443	chr11:60922617-60923443	0	+	60922617	60922617	8553170	2	24,700,	0,126,
#Deleted in new
chr11	60924462	60926631	chr11:60924462-60926631	0	+	60924462	60924462	8553170	2	271,53,	0,2116,
#Deleted in new
chr11	60924469	60930659	chr11:60924469-60930659	0	+	60928880	60930659	789624	5	74,215,219,332,150,	0,2734,3171,4159,6040,
#Partially deleted in new
chr11	60924475	60937023	chr11:60924475-60937023	1	+	60924633	60936907	789624	11	258,215,219,332,150,196,144,203,277,192,1160,	0,2728,3165,4153,6034,7213,7508,9066,10012,10776,11388,
#Partially deleted in new
chr11	60924480	60937159	chr11:60924480-60937159	3	+	60924633	60936907	789624	11	253,215,219,332,150,199,144,203,277,192,1296,	0,2723,3160,4148,6029,7205,7503,9061,10007,10771,11383,
#Deleted in new
chr11	60924491	60925707	chr11:60924491-60925707	0	+	60924491	60924491	8553170	2	242,500,	0,716,
#Deleted in new
chr11	60924497	60927858	chr11:60924497-60927858	0	+	60924497	60924497	8553170	3	236,60,218,	0,2861,3143,
#Deleted in new
chr11	60925703	60926643	chr11:60925703-60926643	0	+	60925703	60925703	8553170	2	381,65,	0,875,
#Partially deleted in new
chr11	60927048	60934607	chr11:60927048-60934607	0	+	60927048	60927048	8553170	7	370,219,332,150,196,144,1066,	0,592,1580,3461,4640,4935,6493,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	60927067	60934617	chr11:60927067-60934617	0	+	60927067	60927067	8553170	5	351,219,332,150,2929,	0,573,1561,3442,4621,
#Partially deleted in new
chr11	60931754	60934608	chr11:60931754-60934608	0	+	60931754	60934608	789624	3	130,203,121,	0,1787,2733,
#Deleted in new
chr11	60933996	60935347	chr11:60933996-60935347	0	+	60933996	60933996	8553170	3	209,277,96,	0,491,1255,
#Deleted in new
chr11	60934337	60935415	chr11:60934337-60935415	0	+	60934337	60934337	8553170	2	427,164,	0,914,
#Deleted in new
chr11	60934642	60937142	chr11:60934642-60937142	0	+	60934642	60935470	789624	2	122,1891,	0,609,
#Deleted in new
chr11	60935317	60937159	chr11:60935317-60937159	0	+	60935317	60936779	789624	3	126,153,413,	0,546,1429,
#Partially deleted in new
chr11	60937083	60951785	chr11:60937083-60951785	3	-	60937218	60951551	789624	8	290,156,159,169,111,148,290,792,	0,786,2396,4038,4951,6605,9448,13910,
#Deleted in new
chr11	60937083	60937984	chr11:60937083-60937984	0	-	60937549	60937984	789624	3	290,51,115,	0,432,786,
#Partially deleted in new
chr11	60937083	60951646	chr11:60937083-60951646	0	-	60937920	60951551	789624	7	290,156,159,111,148,290,653,	0,786,2396,4951,6605,9448,13910,
#Deleted in new
chr11	60937087	60938132	chr11:60937087-60938132	0	-	60937087	60937087	8553170	2	286,263,	0,782,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	60937090	60943619	chr11:60937090-60943619	0	-	60937090	60937090	8553170	3	283,156,4140,	0,779,2389,
#Partially deleted in new
chr11	60937160	60943792	chr11:60937160-60943792	0	-	60937218	60943792	789624	5	213,156,159,169,104,	0,709,2319,3961,6528,
#Partially deleted in new
chr11	60941208	60947819	chr11:60941208-60947819	0	-	60941208	60946818	789624	5	82,111,148,290,45,	0,826,2480,5323,6566,
#Partially deleted in new
chr11	60943505	60946766	chr11:60943505-60946766	0	-	60943505	60943505	8553170	2	331,235,	0,3026,
#Partially deleted in new
chr11	60946533	60952530	chr11:60946533-60952530	0	-	60946533	60951152	789624	3	288,373,30,	0,4460,5967,
#Partially deleted in new
chr11	60971679	61020377	chr11:60971679-61020377	3	+	60971865	61019318	0	13	235,69,351,312,303,66,141,96,123,72,255,105,1124,	0,34894,35880,36854,37892,39390,41743,42239,44033,45799,46079,46609,47574,
#Partially deleted in new
chr11	60971735	61007712	chr11:60971735-61007712	0	+	60971865	60982692	789624	4	179,146,69,153,	0,10889,34838,35824,
#Partially deleted in new
chr11	60971737	61014011	chr11:60971737-61014011	0	+	60971737	60971737	8553170	6	177,69,28,66,141,93,	0,34836,38109,39332,41685,42181,
#Partially deleted in new
chr11	60971745	61020338	chr11:60971745-61020338	0	+	60971865	61015752	789624	12	169,69,351,312,303,66,141,96,103,72,255,1085,	0,34828,35814,36788,37826,39324,41677,42173,43987,45733,46013,47508,
#Partially deleted in new
chr11	60971749	60989392	chr11:60971749-60989392	0	+	60971749	60971749	8553170	3	165,120,121,	0,16158,17522,
#Partially deleted in new
chr11	60971865	61019321	chr11:60971865-61019321	1	+	60971865	61019318	0	11	49,69,351,312,303,66,141,123,72,255,68,	0,34708,35694,36668,37706,39204,41557,43847,45613,45893,47388,
#Partially deleted in new
chr11	60971865	61017843	chr11:60971865-61017843	0	+	60971865	61017843	789624	9	49,69,351,312,66,141,123,72,85,	0,34708,35694,36668,39204,41557,43847,45613,45893,
#Partially deleted in new
chr11	60971865	61019321	chr11:60971865-61019321	1	+	60971865	61019318	0	11	49,69,351,312,303,66,141,96,72,255,68,	0,34708,35694,36668,37706,39204,41557,42053,45613,45893,47388,
#Partially deleted in new
chr11	60971865	61013476	chr11:60971865-61013476	0	+	60971865	61013476	789624	5	49,69,351,312,54,	0,34708,35694,36668,41557,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	60985060	60985167	chr11:60985060-60985167	3	-	60985060	60985060	8553170	1	107,	0,
#Partially deleted in new
chr11	61004410	61007713	chr11:61004410-61007713	0	+	61004410	61004410	8553170	3	200,69,154,	0,2163,3149,
#Partially deleted in new
chr11	61008350	61009636	chr11:61008350-61009636	0	+	61008350	61008350	8553170	2	495,65,	0,1221,
#Partially deleted in new
chr11	61008533	61013955	chr11:61008533-61013955	0	+	61008533	61013955	789624	4	312,66,141,37,	0,2536,4889,5385,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	61015420	61017549	chr11:61015420-61017549	0	+	61015420	61015420	8553170	2	415,71,	0,2058,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	61016902	61020374	chr11:61016902-61020374	0	+	61016902	61016902	8553170	2	1111,2086,	0,1386,
#Partially deleted in new
chr11	61055736	61067535	chr11:61055736-61067535	3	+	61055736	61055736	8553170	4	57,125,165,105,	0,5565,5974,11694,
#Partially deleted in new
chr11	61102394	61127852	chr11:61102394-61127852	3	+	61102560	61125839	0	11	221,39,306,63,342,294,126,54,120,91,1565,	0,12661,15780,16520,16839,19216,20512,21489,22637,23356,23893,
#Partially deleted in new
chr11	61102508	61119359	chr11:61102508-61119359	0	+	61102560	61119359	789624	5	107,39,306,63,32,	0,12547,15666,16406,16819,
#Partially deleted in new
chr11	61130255	61161617	chr11:61130255-61161617	3	-	61131819	61138829	789624	5	2284,83,172,99,227,	0,2999,3780,8481,31135,
#Partially deleted in new
chr11	61132443	61161136	chr11:61132443-61161136	0	-	61132443	61138829	789624	5	96,83,172,99,56,	0,811,1592,6293,28637,
#Partially deleted in new
chr11	61132756	61161453	chr11:61132756-61161453	0	-	61132756	61132756	8553170	4	581,172,99,63,	0,1279,5980,28634,
#Partially deleted in new
chr11	61138195	61161615	chr11:61138195-61161615	0	-	61138195	61138195	8553170	2	640,225,	0,23195,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	61143379	61145464	chr11:61143379-61145464	3	-	61143379	61143379	8553170	1	2085,	0,
#Partially deleted in new
chr11	61203306	61207864	chr11:61203306-61207864	0	+	61203306	61203306	8553170	3	963,118,368,	0,3203,4190,
#Partially deleted in new
chr11	61203379	61213098	chr11:61203379-61213098	3	+	61203564	61212702	789624	9	241,163,118,119,200,117,145,99,546,	0,727,3130,4117,4911,6462,7710,7957,9173,
#Deleted in new
chr11	61203514	61204739	chr11:61203514-61204739	0	+	61203514	61203514	8553170	2	106,633,	0,592,
#Partially deleted in new
chr11	61203514	61206816	chr11:61203514-61206816	0	+	61203514	61203514	8553170	3	106,163,307,	0,592,2995,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	61205679	61211434	chr11:61205679-61211434	0	+	61206509	61211434	789624	6	948,119,200,117,145,98,	0,1817,2611,4162,5410,5657,
#Partially deleted in new
chr11	61207926	61211435	chr11:61207926-61211435	0	+	61207926	61207926	8553170	4	564,117,145,99,	0,1915,3163,3410,
#Partially deleted in new
chr11	61209547	61212865	chr11:61209547-61212865	1	+	61209647	61212702	789624	4	411,145,99,313,	0,1542,1789,3005,
#Partially deleted in new
chr11	61210753	61212839	chr11:61210753-61212839	1	+	61211096	61212702	789624	3	481,99,287,	0,583,1799,
#Partially deleted in new
chr11	61222215	61231927	chr11:61222215-61231927	3	+	61222400	61231531	0	9	241,163,118,119,200,117,145,99,546,	0,727,3123,4110,4904,6455,7703,7950,9166,
#Partially deleted in new
chr11	61222350	61225645	chr11:61222350-61225645	0	+	61222350	61222350	8553170	3	106,163,307,	0,592,2988,
#Deleted in new
chr11	61222350	61223413	chr11:61222350-61223413	0	+	61222350	61222350	8553170	2	106,471,	0,592,
#Partially deleted in new
chr11	61222350	61226693	chr11:61222350-61226693	0	+	61222350	61222350	8553170	4	106,163,118,368,	0,592,2988,3975,
#Partially deleted in new
chr11	61227109	61231452	chr11:61227109-61231452	0	+	61227109	61227109	8553170	5	210,117,145,99,71,	0,1561,2809,3056,4272,
#Partially deleted in new
chr11	61227167	61248533	chr11:61227167-61248533	3	+	61227167	61227167	8553170	2	152,115,	0,21251,
#Partially deleted in new
chr11	61228376	61231566	chr11:61228376-61231566	1	+	61228476	61231531	789624	4	411,145,99,185,	0,1542,1789,3005,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	61228376	61231694	chr11:61228376-61231694	0	+	61228376	61228376	8553170	1	3318,	0,
#Partially deleted in new
chr11	61229582	61231668	chr11:61229582-61231668	1	+	61229925	61231531	789624	3	481,99,287,	0,583,1799,
#Partially deleted in new
chr11	61241041	61251448	chr11:61241041-61251448	3	+	61241226	61251281	789624	9	241,163,118,119,200,117,145,99,317,	0,727,3123,4110,4904,7377,8627,8874,10090,
#Partially deleted in new
chr11	61241176	61244471	chr11:61241176-61244471	0	+	61241176	61241176	8553170	3	106,163,307,	0,592,2988,
#Deleted in new
chr11	61241176	61242254	chr11:61241176-61242254	0	+	61241176	61241176	8553170	2	106,486,	0,592,
#Partially deleted in new
chr11	61241845	61245519	chr11:61241845-61245519	0	+	61241845	61241845	8553170	3	86,118,368,	0,2319,3306,
#Partially deleted in new
chr11	61248121	61251444	chr11:61248121-61251444	1	+	61248224	61251281	789624	4	414,145,99,313,	0,1547,1794,3010,
#Partially deleted in new
chr11	61249332	61251418	chr11:61249332-61251418	1	+	61249675	61251281	789624	3	481,99,287,	0,583,1799,
#Partially deleted in new
chr11	61258285	61295091	chr11:61258285-61295091	0	-	61281908	61295037	789624	20	1027,91,83,91,83,158,86,118,86,88,83,94,443,129,113,117,129,90,95,164,	0,6201,6670,6836,9176,10636,13389,14913,16213,18307,20108,22338,22507,23500,24507,28028,32513,32978,33196,36642,
#Partially deleted in new
chr11	61258288	61291342	chr11:61258288-61291342	1	-	61258674	61281173	789624	22	521,207,201,36,53,91,83,91,83,97,86,118,86,88,83,94,443,129,117,117,129,79,	0,522,731,934,972,6198,6667,6833,9173,10633,13386,14910,16210,18304,20105,22335,22504,23497,24500,28025,32510,32975,
#Partially deleted in new
chr11	61258289	61295424	chr11:61258289-61295424	3	-	61258674	61295037	789624	20	1023,91,83,91,83,97,86,118,86,88,83,94,443,129,117,117,129,90,95,497,	0,6197,6666,6832,9172,10632,13385,14909,16209,18303,20104,22334,22503,23496,24499,28024,32509,32974,33192,36638,
#Partially deleted in new
chr11	61258623	61273806	chr11:61258623-61273806	1	-	61258674	61273292	789624	9	689,91,83,91,83,97,86,118,99,	0,5863,6332,6498,8838,10298,13051,14575,15084,
#Partially deleted in new
chr11	61259080	61269417	chr11:61259080-61269417	0	-	61259080	61259080	8553170	6	232,91,83,91,83,496,	0,5406,5875,6041,8381,9841,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	61271164	61273319	chr11:61271164-61273319	0	-	61271164	61271164	8553170	2	596,121,	0,2034,
#Partially deleted in new
chr11	61282497	61295095	chr11:61282497-61295095	0	-	61290828	61295037	789624	6	39,117,117,129,313,168,	0,291,3816,8301,8766,12430,
#Partially deleted in new
chr11	61286262	61295026	chr11:61286262-61295026	0	-	61286262	61286262	8553170	5	168,129,90,95,99,	0,4536,5001,5219,8665,
#Partially deleted in new
chr11	61299450	61333366	chr11:61299450-61333366	3	-	61300135	61332968	0	27	769,124,103,170,110,171,95,165,124,112,96,208,108,164,179,109,76,103,117,84,159,98,115,222,117,149,459,	0,1358,2806,3131,3595,4414,9532,10345,10844,12333,12538,14048,14411,14596,14857,16834,17041,22144,22845,23560,24528,26160,27328,29912,30507,32092,33457,
#Partially deleted in new
chr11	61299555	61302914	chr11:61299555-61302914	0	-	61299555	61299555	8553170	4	664,124,103,333,	0,1253,2701,3026,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	61299680	61302551	chr11:61299680-61302551	0	-	61299680	61299680	8553170	2	539,1743,	0,1128,
#Partially deleted in new
chr11	61300050	61342596	chr11:61300050-61342596	0	-	61300872	61332968	789624	29	169,128,103,170,110,171,95,165,124,112,96,208,108,164,179,109,76,103,117,84,159,98,115,222,117,149,101,125,229,	0,758,2206,2531,2995,3814,8932,9745,10244,11733,11938,13448,13811,13996,14257,16234,16441,21544,22245,22960,23928,25560,26728,29312,29907,31492,32857,35260,42317,
#Partially deleted in new
chr11	61300070	61303357	chr11:61300070-61303357	0	-	61300070	61300070	8553170	5	149,124,103,170,312,	0,738,2186,2511,2975,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	61302580	61311349	chr11:61302580-61311349	0	-	61302580	61302580	8553170	6	171,110,171,95,165,1055,	0,465,1284,6402,7215,7714,
#Partially deleted in new
chr11	61309808	61333053	chr11:61309808-61333053	0	-	61309808	61332968	789624	4	152,124,149,146,	0,486,21734,23099,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	61310295	61316285	chr11:61310295-61316285	0	-	61310295	61310295	8553170	7	123,112,96,208,108,164,1978,	0,1488,1693,3203,3566,3751,4012,
#Partially deleted in new
chr11	61313537	61322164	chr11:61313537-61322164	0	-	61313537	61313537	8553170	7	169,108,164,179,109,76,570,	0,324,509,770,2747,2954,8057,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	61313672	61315750	chr11:61313672-61315750	0	-	61313672	61313672	8553170	3	297,164,1443,	0,374,635,
#Partially deleted in new
chr11	61313859	61322958	chr11:61313859-61322958	0	-	61313859	61313859	8553170	7	110,164,179,109,76,103,663,	0,187,448,2425,2632,7735,8436,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	61314046	61323886	chr11:61314046-61323886	0	-	61314046	61314046	8553170	7	164,179,109,76,103,117,876,	0,261,2238,2445,7548,8249,8964,
#Partially deleted in new
chr11	61314047	61324266	chr11:61314047-61324266	0	-	61314047	61314047	8553170	8	163,179,109,76,103,117,84,288,	0,260,2237,2444,7547,8248,8963,9931,
#Partially deleted in new
chr11	61314337	61316569	chr11:61314337-61316569	0	-	61314337	61314337	8553170	2	149,78,	0,2154,
#Partially deleted in new
chr11	61314452	61327551	chr11:61314452-61327551	0	-	61314452	61314452	8553170	12	34,192,109,76,103,117,84,159,150,98,115,41,	0,879,1832,2039,7142,7843,8558,9526,9785,11158,12326,13058,
#Partially deleted in new
chr11	61316280	61326924	chr11:61316280-61326924	0	-	61316280	61316280	8553170	8	113,76,103,117,84,159,98,146,	0,211,5314,6015,6730,7698,9330,10498,
#Partially deleted in new
chr11	61321254	61326897	chr11:61321254-61326897	0	-	61321254	61321254	8553170	6	443,117,84,159,98,119,	0,1041,1756,2724,4356,5524,
#Partially deleted in new
chr11	61322316	61326229	chr11:61322316-61326229	0	-	61322316	61322316	8553170	4	96,84,159,619,	0,694,1662,3294,
#Partially deleted in new
chr11	61323757	61333041	chr11:61323757-61333041	0	-	61323757	61323757	8553170	7	380,98,115,222,117,149,134,	0,1853,3021,5605,6200,7785,9150,
#Partially deleted in new
chr11	61324083	61333066	chr11:61324083-61333066	0	-	61324083	61324083	8553170	5	54,98,115,149,159,	0,1527,2695,7459,8824,
#Partially deleted in new
chr11	61326778	61332835	chr11:61326778-61332835	0	-	61326778	61331584	789624	5	115,222,117,149,202,	0,2584,3179,4764,5855,
#Partially deleted in new
chr11	61329325	61332386	chr11:61329325-61332386	0	-	61329325	61331584	789624	3	259,117,844,	0,632,2217,
#Partially deleted in new
chr11	61329361	61330209	chr11:61329361-61330209	0	-	61329361	61329361	8553170	2	223,252,	0,596,
#Partially deleted in new
chr11	61329473	61333224	chr11:61329473-61333224	0	-	61329473	61332968	789624	5	111,117,149,101,80,	0,484,2069,3434,3671,
#Partially deleted in new
chr11	61329956	61333775	chr11:61329956-61333775	0	-	61329956	61332968	789624	4	118,149,101,172,	0,1586,2951,3647,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr11	61333209	61349242	chr11:61333209-61349242	3	+	61334728	61346503	789624	18	120,112,190,111,182,79,90,35,85,90,117,120,138,107,104,34,90,2892,	0,1410,4731,5856,6044,8226,8613,9251,9364,9545,10132,10646,10926,12050,12252,12502,12647,13141,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	61333219	61333935	chr11:61333219-61333935	0	+	61333219	61333219	8553170	2	93,387,	0,329,
#Partially deleted in new
chr11	61333221	61339435	chr11:61333221-61339435	0	+	61334728	61339435	789624	6	108,102,112,190,111,182,	0,327,1398,4719,5844,6032,
#Partially deleted in new
chr11	61333271	61338035	chr11:61333271-61338035	0	+	61333271	61333271	8553170	4	58,112,168,95,	0,1348,2932,4669,
#Partially deleted in new
chr11	61333279	61339123	chr11:61333279-61339123	0	+	61333279	61333279	8553170	5	50,112,187,190,58,	0,1340,2924,4661,5786,
#Partially deleted in new
chr11	61334341	61338108	chr11:61334341-61338108	0	+	61334728	61338108	789624	2	390,168,	0,3599,
#Partially deleted in new
chr11	61337940	61346503	chr11:61337940-61346503	0	+	61337940	61346324	789624	16	190,111,182,79,90,35,85,90,117,120,138,107,104,34,90,209,	0,1125,1313,3495,3882,4520,4633,4814,5401,5915,6195,7319,7521,7771,7916,8354,
#Deleted in new
chr11	61339117	61339526	chr11:61339117-61339526	0	+	61339117	61339117	8553170	2	59,273,	0,136,
#Deleted in new
chr11	61341674	61342778	chr11:61341674-61342778	0	+	61341674	61341674	8553170	3	238,198,24,	0,786,1080,
#Deleted in new
chr11	61342322	61342993	chr11:61342322-61342993	0	+	61342322	61342322	8553170	2	336,239,	0,432,
#Deleted in new
chr11	61342400	61343159	chr11:61342400-61343159	0	+	61342400	61342400	8553170	3	95,85,405,	0,173,354,
#Deleted in new
chr11	61343209	61343966	chr11:61343209-61343966	0	+	61343209	61343209	8553170	2	249,111,	0,646,
#Partially deleted in new
chr11	61343615	61345316	chr11:61343615-61345316	0	+	61343615	61343615	8553170	3	360,138,57,	0,520,1644,
#Partially deleted in new
chr11	61343920	61353295	chr11:61343920-61353295	0	+	61343920	61352991	789624	7	55,138,107,104,34,90,436,	0,215,1339,1541,1791,1936,8939,
#Deleted in new
chr11	61345313	61346890	chr11:61345313-61346890	0	+	61345313	61345313	8553170	4	252,34,90,540,	0,398,543,1037,
#Deleted in new
chr11	61345318	61345960	chr11:61345318-61345960	0	+	61345318	61345318	8553170	2	247,249,	0,393,
#Deleted in new
chr11	61345355	61346190	chr11:61345355-61346190	0	+	61345355	61345355	8553170	4	11,104,34,334,	0,106,356,501,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	61348744	61362299	chr11:61348744-61362299	3	-	61350398	61356713	789624	7	1678,157,155,209,199,96,567,	0,2246,4240,5039,7785,8988,12988,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	61348753	61362283	chr11:61348753-61362283	1	-	61350398	61357238	789624	8	1669,157,155,209,199,169,96,551,	0,2237,4231,5030,7776,8449,8979,12979,
#Partially deleted in new
chr11	61348817	61361913	chr11:61348817-61361913	0	-	61348817	61348817	8553170	5	826,157,184,209,181,	0,2173,4138,4966,12915,
#Partially deleted in new
chr11	61348837	61361913	chr11:61348837-61361913	1	-	61349556	61356713	789624	7	806,157,155,209,199,96,181,	0,2153,4147,4946,7692,8895,12895,
#Deleted in new
chr11	61348889	61351284	chr11:61348889-61351284	0	-	61348889	61348889	8553170	2	1533,294,	0,2101,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	61349646	61361890	chr11:61349646-61361890	1	-	61353075	61356713	789624	5	3493,40,199,96,158,	0,4137,6883,8086,12086,
#Partially deleted in new
chr11	61349656	61361853	chr11:61349656-61361853	0	-	61353005	61356713	789624	6	766,157,155,199,96,121,	0,1334,3328,6873,8076,12076,
#Partially deleted in new
chr11	61349840	61361849	chr11:61349840-61361849	1	-	61351001	61356713	789624	5	582,142,199,96,117,	0,1150,6689,7892,11892,
#Partially deleted in new
chr11	61350125	61357279	chr11:61350125-61357279	1	-	61350398	61356713	789624	6	297,157,155,209,199,77,	0,865,2859,3658,6404,7077,
#Partially deleted in new
chr11	61350279	61356801	chr11:61350279-61356801	1	-	61351001	61356713	789624	3	143,157,272,	0,711,6250,
#Partially deleted in new
chr11	61351058	61354741	chr11:61351058-61354741	0	-	61351058	61353912	789624	3	89,155,958,	0,1926,2725,
#Partially deleted in new
chr11	61351096	61357347	chr11:61351096-61357347	0	-	61351096	61356713	789624	5	51,155,209,199,36,	0,1888,2687,5433,6215,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	61352243	61354477	chr11:61352243-61354477	3	+	61352243	61352243	8553170	1	2234,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	61352985	61361264	chr11:61352985-61361264	0	-	61352985	61356713	789624	4	154,209,199,3532,	0,798,3544,4747,
#Partially deleted in new
chr11	61353105	61356889	chr11:61353105-61356889	0	-	61353105	61353105	8553170	3	457,209,360,	0,678,3424,
#Partially deleted in new
chr11	61353830	61361885	chr11:61353830-61361885	0	-	61353830	61356713	789624	5	162,199,169,96,153,	0,2699,3372,3902,7902,
#Partially deleted in new
chr11	61356410	61361876	chr11:61356410-61361876	0	-	61356410	61356410	8553170	3	318,96,144,	0,1322,5322,
#Partially deleted in new
chr11	61356521	61362271	chr11:61356521-61362271	0	-	61356521	61356521	8553170	2	207,539,	0,5211,
#Partially deleted in new
chr11	61356547	61361882	chr11:61356547-61361882	0	-	61356547	61356713	789624	4	181,96,146,150,	0,1185,2878,5185,
#Partially deleted in new
chr11	61356627	61362262	chr11:61356627-61362262	0	-	61356627	61356713	789624	4	101,96,87,256,	0,1105,5105,5379,
#Partially deleted in new
chr11	61356732	61362248	chr11:61356732-61362248	0	-	61356732	61356732	8553170	3	52,96,516,	0,1000,5000,
#Partially deleted in new
chr11	61362000	61369509	chr11:61362000-61369509	3	+	61364390	61368709	789624	5	420,267,172,76,913,	0,2251,4044,5922,6596,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	61362343	61366557	chr11:61362343-61366557	0	+	61362343	61362343	8553170	4	77,64,86,513,	0,1908,2089,3701,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	61362360	61368556	chr11:61362360-61368556	1	+	61364390	61366234	789624	3	60,267,2512,	0,1891,3684,
#Partially deleted in new
chr11	61362360	61364802	chr11:61362360-61364802	0	+	61362360	61362360	8553170	2	60,551,	0,1891,
#Partially deleted in new
chr11	61362385	61367540	chr11:61362385-61367540	0	+	61362385	61362385	8553170	4	35,267,172,113,	0,1866,3659,5042,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	61362386	61368583	chr11:61362386-61368583	0	+	61362386	61362386	8553170	4	34,267,172,661,	0,1865,3658,5536,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	61362668	61368769	chr11:61362668-61368769	0	+	61362668	61362668	8553170	4	1647,172,76,173,	0,3376,5254,5928,
#Partially deleted in new
chr11	61364249	61368751	chr11:61364249-61368751	0	+	61364249	61364249	8553170	5	66,86,172,76,155,	0,183,1795,3673,4347,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	61365702	61369211	chr11:61365702-61369211	1	+	61366090	61368709	789624	3	514,76,615,	0,2220,2894,
#Partially deleted in new
chr11	61366978	61369211	chr11:61366978-61369211	0	+	61366978	61366978	8553170	2	1020,615,	0,1618,
#Partially deleted in new
chr11	61367904	61369211	chr11:61367904-61369211	0	+	61367904	61367904	8553170	2	94,440,	0,867,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	61391686	61398851	chr11:61391686-61398851	3	+	61392631	61398276	789624	5	979,102,93,202,582,	0,1544,2197,6087,6583,
#Partially deleted in new
chr11	61392359	61398863	chr11:61392359-61398863	1	+	61392631	61398276	789624	5	306,102,93,202,603,	0,871,1524,5414,5901,
#Partially deleted in new
chr11	61392392	61398493	chr11:61392392-61398493	1	+	61393930	61398276	789624	5	287,102,93,202,224,	0,838,1491,5381,5877,
#Partially deleted in new
chr11	61392629	61397975	chr11:61392629-61397975	0	+	61392629	61392629	8553170	4	50,102,93,248,	0,601,1254,5098,
#Deleted in new
chr11	61392631	61394301	chr11:61392631-61394301	0	+	61392631	61392631	8553170	3	48,102,418,	0,599,1252,
#Partially deleted in new
chr11	61402640	61429911	chr11:61402640-61429911	1	-	61410942	61429830	0	10	2064,168,169,119,415,173,104,219,109,155,	0,8297,9128,13025,13464,17281,17829,18749,26541,27116,
#Partially deleted in new
chr11	61402648	61430031	chr11:61402648-61430031	3	-	61410942	61429235	0	10	2056,168,169,119,415,173,104,219,109,118,	0,8289,9120,13017,13456,17273,17821,18741,26533,27265,
#Partially deleted in new
chr11	61402730	61430014	chr11:61402730-61430014	1	-	61410942	61429235	0	10	1974,168,169,119,415,146,104,219,109,101,	0,8207,9038,12935,13374,17218,17739,18659,26451,27183,
#Deleted in new
chr11	61404287	61406170	chr11:61404287-61406170	0	-	61404287	61404287	8553170	2	417,239,	0,1644,
#Partially deleted in new
chr11	61404418	61429304	chr11:61404418-61429304	1	-	61410942	61429235	0	9	286,168,169,119,415,146,104,219,123,	0,6519,7350,11247,11686,15530,16051,16971,24763,
#Partially deleted in new
chr11	61410571	61429975	chr11:61410571-61429975	0	-	61410571	61410571	8553170	5	534,169,854,109,62,	0,1197,5094,18610,19342,
#Partially deleted in new
chr11	61411006	61429968	chr11:61411006-61429968	0	-	61411006	61429235	789624	10	99,169,119,58,156,146,104,219,109,55,	0,762,4659,5098,5357,8942,9463,10383,18175,18907,
#Partially deleted in new
chr11	61416177	61429950	chr11:61416177-61429950	0	-	61416177	61416177	8553170	5	342,173,1139,109,37,	0,3744,4292,13004,13736,
#Partially deleted in new
chr11	61416178	61429920	chr11:61416178-61429920	0	-	61416178	61429235	789624	6	341,146,104,219,109,34,	0,3770,4291,5211,13003,13708,
#Partially deleted in new
chr11	61416296	61429978	chr11:61416296-61429978	0	-	61421097	61429235	789624	7	223,146,104,74,219,109,65,	0,3652,4173,4757,5093,12885,13617,
#Partially deleted in new
chr11	61416368	61429284	chr11:61416368-61429284	0	-	61420085	61429235	789624	5	151,146,27,219,103,	0,3580,4178,5021,12813,
#Partially deleted in new
chr11	61416384	61429922	chr11:61416384-61429922	0	-	61416384	61429235	789624	6	135,146,104,219,109,9,	0,3564,4085,5005,12797,13529,
#Partially deleted in new
chr11	61416428	61429814	chr11:61416428-61429814	0	-	61416428	61429235	789624	6	91,146,104,219,109,58,	0,3520,4041,4961,12753,13328,
#Partially deleted in new
chr11	61416464	61429988	chr11:61416464-61429988	0	-	61421224	61429235	789624	7	55,173,104,66,219,109,75,	0,3457,4005,4727,4925,12717,13449,
#Partially deleted in new
chr11	61416499	61429264	chr11:61416499-61429264	0	-	61420085	61429235	789624	4	20,173,219,83,	0,3422,4890,12682,
#Partially deleted in new
chr11	61419969	61429948	chr11:61419969-61429948	1	-	61420506	61429235	789624	5	125,61,219,109,35,	0,500,1420,9212,9944,
#Partially deleted in new
chr11	61420030	61429922	chr11:61420030-61429922	0	-	61421224	61429235	789624	6	64,104,66,219,109,36,	0,439,1161,1359,9151,9856,
#Partially deleted in new
chr11	61420034	61429922	chr11:61420034-61429922	0	-	61420034	61429235	789624	5	60,104,219,109,82,	0,435,1355,9147,9806,
#Partially deleted in new
chr11	61420040	61429715	chr11:61420040-61429715	0	-	61420040	61429235	789624	5	54,104,219,109,81,	0,429,1349,9141,9594,
#Partially deleted in new
chr11	61420056	61429550	chr11:61420056-61429550	0	-	61420056	61429235	789624	5	38,104,219,109,101,	0,413,1333,9125,9393,
#Partially deleted in new
chr11	61420057	61429290	chr11:61420057-61429290	0	-	61421097	61429235	789624	5	37,104,77,219,109,	0,412,996,1332,9124,
#Partially deleted in new
chr11	61420493	61429920	chr11:61420493-61429920	0	-	61420493	61420493	8553170	5	80,77,219,109,80,	0,560,896,8688,9347,
#Partially deleted in new
chr11	61420992	61429992	chr11:61420992-61429992	0	-	61420992	61420992	8553170	4	138,219,109,79,	0,397,8189,8921,
#Partially deleted in new
chr11	61421224	61429235	chr11:61421224-61429235	1	-	61421224	61429235	789624	3	33,219,54,	0,165,7957,
#Partially deleted in new
chr11	61421313	61429533	chr11:61421313-61429533	0	-	61421313	61421313	8553170	3	295,109,84,	0,7868,8136,
#Partially deleted in new
chr11	61421394	61429941	chr11:61421394-61429941	0	-	61421394	61421394	8553170	3	214,393,28,	0,7503,8519,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	61426447	61427325	chr11:61426447-61427325	3	-	61426447	61426447	8553170	1	878,	0,
#Partially deleted in new
chr11	61429219	61481879	chr11:61429219-61481879	0	+	61429219	61429219	8553170	4	131,224,110,98,	0,8405,8784,52562,
#Partially deleted in new
chr11	61430041	61446342	chr11:61430041-61446342	0	+	61430146	61436922	789624	5	141,200,224,110,402,	0,6719,7583,7962,15899,
#Partially deleted in new
chr11	61430055	61481842	chr11:61430055-61481842	2	+	61430146	61481842	789624	5	127,224,117,51,61,	0,7569,7948,38608,51726,
#Partially deleted in new
chr11	61430072	61447529	chr11:61430072-61447529	3	+	61430146	61446071	789624	4	110,224,110,1589,	0,7552,7931,15868,
#Partially deleted in new
chr11	61430104	61446697	chr11:61430104-61446697	1	+	61430146	61445991	789624	2	78,757,	0,15836,
#Partially deleted in new
chr11	61430120	61468716	chr11:61430120-61468716	0	+	61430120	61430120	8553170	4	62,224,110,53,	0,7504,7883,38543,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	61430123	61438243	chr11:61430123-61438243	1	+	61430146	61438169	789624	3	59,224,240,	0,7501,7880,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	61430123	61436135	chr11:61430123-61436135	0	+	61430123	61430123	8553170	1	6012,	0,
#Partially deleted in new
chr11	61430124	61484727	chr11:61430124-61484727	0	+	61430146	61481813	789624	5	58,224,110,137,40,	0,7500,7879,51657,54563,
#Partially deleted in new
chr11	61430125	61484762	chr11:61430125-61484762	0	+	61430146	61481813	789624	7	57,224,110,137,118,154,75,	0,7499,7878,51656,52185,52529,54562,
#Partially deleted in new
chr11	61430130	61438186	chr11:61430130-61438186	0	+	61430146	61436922	789624	4	52,200,224,183,	0,6630,7494,7873,
#Partially deleted in new
chr11	61430142	61485822	chr11:61430142-61485822	0	+	61430142	61430142	8553170	6	40,224,110,129,64,24,	0,7482,7861,54545,55195,55656,
#Partially deleted in new
chr11	61430143	61446115	chr11:61430143-61446115	1	+	61430146	61445947	789624	3	39,224,175,	0,7481,15797,
#Partially deleted in new
chr11	61430149	61482398	chr11:61430149-61482398	1	+	61437624	61446071	789624	6	33,224,110,291,137,88,	0,7475,7854,15791,51632,52161,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	61444148	61444423	chr11:61444148-61444423	3	+	61444148	61444148	8553170	1	275,	0,
#Partially deleted in new
chr11	61481119	61490931	chr11:61481119-61490931	3	+	61481809	61490570	789624	14	97,137,118,154,129,64,113,60,87,114,95,165,84,118,	0,662,1191,1535,3568,4218,4679,5224,5404,5828,6026,8662,9381,9694,
#Partially deleted in new
chr11	61481119	61490928	chr11:61481119-61490928	1	+	61481809	61490570	789624	13	97,137,118,154,129,64,113,87,114,95,165,84,115,	0,662,1191,1535,3568,4218,4679,5404,5828,6026,8662,9381,9694,
#Partially deleted in new
chr11	61485884	61490862	chr11:61485884-61490862	0	+	61485884	61490570	789624	7	27,60,114,95,165,84,49,	0,459,1063,1261,3897,4616,4929,
#Partially deleted in new
chr11	61486355	61490918	chr11:61486355-61490918	0	+	61486355	61490570	789624	6	48,87,114,95,84,105,	0,168,592,790,4145,4458,
#Deleted in new
chr11	61488841	61490931	chr11:61488841-61490931	1	+	61489848	61490570	789624	4	121,165,84,118,	0,940,1659,1972,
#Deleted in new
chr11	61489037	61490927	chr11:61489037-61490927	1	+	61489707	61490570	789624	3	909,84,114,	0,1463,1776,
#Partially deleted in new
chr11	61496439	61500076	chr11:61496439-61500076	3	+	61496439	61496439	8553170	2	240,314,	0,3323,
#Deleted in new
chr11	61508595	61508657	chr11:61508595-61508657	3	+	61508595	61508595	5263520	1	62,	0,
#Deleted in new
chr11	61508799	61511018	chr11:61508799-61511018	3	+	61508998	61509877	789624	1	2219,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	61515312	61581148	chr11:61515312-61581148	3	-	61518626	61580820	0	9	3419,200,115,170,271,136,80,104,359,	0,7762,8514,9050,12602,17676,36071,40791,65477,
#Partially deleted in new
chr11	61518056	61580826	chr11:61518056-61580826	1	-	61518626	61580820	0	10	675,200,115,170,271,136,225,80,104,37,	0,5018,5770,6306,9858,14932,27974,33327,38047,62733,
#Partially deleted in new
chr11	61518626	61580872	chr11:61518626-61580872	1	-	61518626	61580820	0	11	105,200,115,170,271,136,225,132,80,104,83,	0,4448,5200,5736,9288,14362,27404,28550,32757,37477,62163,
#Partially deleted in new
chr11	61518626	61580820	chr11:61518626-61580820	1	-	61518626	61580820	0	13	105,200,115,170,271,136,123,369,225,132,80,104,31,	0,4448,5200,5736,9288,14362,19517,23584,27404,28550,32757,37477,62163,
#Partially deleted in new
chr11	61518626	61580820	chr11:61518626-61580820	0	-	61546637	61580820	789624	13	105,200,115,170,271,136,123,369,125,132,80,104,31,	0,4448,5200,5736,9288,14362,19517,23584,27908,28550,32757,37477,62163,
#Partially deleted in new
chr11	61518626	61580820	chr11:61518626-61580820	0	-	61546637	61580820	789624	14	105,200,115,170,271,136,123,369,225,125,132,80,104,31,	0,4448,5200,5736,9288,14362,19517,23584,27404,27908,28550,32757,37477,62163,
#Partially deleted in new
chr11	61518626	61580871	chr11:61518626-61580871	1	-	61518626	61580820	0	12	105,200,115,170,271,136,123,369,132,80,104,82,	0,4448,5200,5736,9288,14362,19517,23584,28550,32757,37477,62163,
#Partially deleted in new
chr11	61518626	61580838	chr11:61518626-61580838	1	-	61518626	61580820	0	10	105,200,115,170,271,136,132,80,104,49,	0,4448,5200,5736,9288,14362,28550,32757,37477,62163,
#Partially deleted in new
chr11	61523899	61533103	chr11:61523899-61533103	0	-	61523899	61523899	8553170	5	42,170,125,271,115,	0,463,789,4015,9089,
#Deleted in new
chr11	61525707	61526602	chr11:61525707-61526602	3	-	61525707	61525707	8553170	1	895,	0,
#Partially deleted in new
chr11	61528010	61580872	chr11:61528010-61580872	0	-	61528010	61580820	789624	5	175,136,80,104,83,	0,4978,23373,28093,52779,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	61539515	61542259	chr11:61539515-61542259	3	-	61539515	61539515	8553170	2	1782,49,	0,2695,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	61615035	61639449	chr11:61615035-61639449	7	+	61615035	61615035	16724991	5	93,143,198,226,2865,	0,9949,13806,21093,21549,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	61615036	61636241	chr11:61615036-61636241	4	+	61615036	61615036	16724991	4	92,143,198,140,	0,9948,13805,21065,
#Partially deleted in new
chr11	61628772	61636312	chr11:61628772-61636312	4	+	61628772	61628772	16724991	3	267,120,211,	0,1396,7329,
#Partially deleted in new
chr11	61628827	61636387	chr11:61628827-61636387	4	+	61628827	61628827	16724991	3	212,120,259,	0,1341,7301,
#Partially deleted in new
chr11	61628860	61636522	chr11:61628860-61636522	4	+	61628860	61628860	16724991	2	179,394,	0,7268,
#Deleted in new
chr11	61636679	61637640	chr11:61636679-61637640	5	+	61636679	61636679	16724991	1	961,	0,
#Duplicated in new
chr11	61654664	61655702	chr11:61654664-61655702	3	-	61654664	61654664	8553170	2	407,55,	0,983,
#Partially deleted in new
chr11	61680432	61747001	chr11:61680432-61747001	3	+	61720155	61744489	789624	20	72,139,212,102,139,88,135,78,125,154,84,78,81,143,69,73,197,130,188,3470,	0,39679,40246,42426,43001,45562,47720,48498,50884,54416,55128,55306,55837,56749,57254,57702,59032,60030,60729,63099,
#Partially deleted in new
chr11	61680466	61747000	chr11:61680466-61747000	0	+	61720155	61723551	789624	20	38,139,189,102,139,88,135,78,125,154,84,78,81,143,69,73,197,130,188,3469,	0,39645,40212,42392,42967,45528,47686,48464,50850,54382,55094,55272,55803,56715,57220,57668,58998,59996,60695,63065,
#Partially deleted in new
chr11	61746492	61757649	chr11:61746492-61757649	3	-	61746492	61746492	8553170	6	649,113,1200,62,281,161,	0,858,2050,9142,10590,10996,
#Deleted in new
chr11	61746924	61748693	chr11:61746924-61748693	0	-	61746924	61746924	8553170	3	199,113,151,	0,426,1618,
#Partially deleted in new
chr11	61752641	61766867	chr11:61752641-61766867	0	+	61752641	61752641	8553170	2	149,1243,	0,12983,
#Partially deleted in new
chr11	61752648	61788518	chr11:61752648-61788518	1	+	61752744	61786143	0	27	142,88,264,62,280,251,124,196,77,111,91,201,112,110,161,73,89,69,81,86,192,252,103,75,106,75,2456,	0,12976,13309,16611,17597,18851,19180,21318,23407,23673,24138,24615,25085,25731,26614,26849,27193,27573,28063,28311,28489,28924,30849,31202,31631,33151,33414,
#Deleted in new
chr11	61754028	61757655	chr11:61754028-61757655	0	-	61754028	61754028	5263520	4	417,62,281,167,	0,1606,3054,3460,
#Partially deleted in new
chr11	61755388	61788517	chr11:61755388-61788517	3	+	61755423	61786143	0	26	54,88,264,62,280,251,124,196,77,111,91,201,112,110,161,73,89,69,89,192,252,88,75,106,75,2455,	0,10236,10569,13871,14857,16111,16440,18578,20667,20933,21398,21875,22345,22991,23874,24109,24453,24833,25568,25749,26184,28124,28462,28891,30411,30674,
#Partially deleted in new
chr11	61768500	61790603	chr11:61768500-61790603	0	-	61768500	61768500	8553170	5	273,169,231,137,111,	0,5478,10352,21284,21992,
#Partially deleted in new
chr11	61777605	61786417	chr11:61777605-61786417	1	+	61777769	61786143	789624	15	240,110,161,73,89,69,81,86,192,252,88,75,106,75,355,	0,774,1657,1892,2236,2616,3106,3354,3532,3967,5907,6245,6674,8194,8457,
#Deleted in new
chr11	61778828	61781045	chr11:61778828-61781045	0	+	61778828	61778828	8553170	5	742,89,69,81,86,	0,1013,1393,1883,2131,
#Deleted in new
chr11	61778828	61782312	chr11:61778828-61782312	0	+	61778828	61778828	8553170	7	595,73,89,69,86,192,740,	0,669,1013,1393,2131,2309,2744,
#Deleted in new
chr11	61780211	61783545	chr11:61780211-61783545	0	+	61780211	61780211	8553170	5	79,89,192,252,33,	0,745,926,1361,3301,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	61781936	61785510	chr11:61781936-61785510	0	+	61781936	61781936	8553170	2	1664,1660,	0,1914,
#Partially deleted in new
chr11	61788962	61792610	chr11:61788962-61792610	3	-	61789794	61792558	789624	4	273,137,110,55,	0,822,1530,3593,
#Partially deleted in new
chr11	61789129	61792601	chr11:61789129-61792601	0	-	61789794	61792558	789624	4	106,206,110,46,	0,586,1363,3426,
#Partially deleted in new
chr11	61789129	61792616	chr11:61789129-61792616	0	-	61790455	61792558	789624	3	106,228,61,	0,1245,3426,
#Partially deleted in new
chr11	61789129	61792580	chr11:61789129-61792580	0	-	61790455	61792558	789624	4	106,206,180,25,	0,655,1293,3426,
#Partially deleted in new
chr11	61789129	61792594	chr11:61789129-61792594	0	-	61790455	61792558	789624	4	106,206,228,39,	0,655,1245,3426,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	61789130	61792802	chr11:61789130-61792802	1	-	61789794	61790590	789624	4	105,137,110,1340,	0,654,1362,2332,
#Partially deleted in new
chr11	61790096	61792602	chr11:61790096-61792602	0	-	61790096	61790096	8553170	2	506,47,	0,2459,
#Deleted in new
chr11	61792494	61792561	chr11:61792494-61792561	3	-	61792494	61792494	5263520	1	67,	0,
#Partially deleted in new
chr11	61792636	61797244	chr11:61792636-61797244	3	+	61795361	61796504	0	2	392,1904,	0,2704,
#Partially deleted in new
chr11	61792950	61795856	chr11:61792950-61795856	0	+	61795361	61795856	789624	2	260,516,	0,2390,
#Partially deleted in new
chr11	61792979	61826512	chr11:61792979-61826512	1	+	61826085	61826398	789624	3	49,106,230,	0,33052,33303,
#Deleted in new
chr11	61795939	61797232	chr11:61795939-61797232	0	+	61795939	61796927	789624	2	457,311,	0,982,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	61799624	61817162	chr11:61799624-61817162	3	-	61802410	61816929	789624	12	2838,126,80,97,98,77,61,129,102,198,111,608,	0,3176,3407,3738,4045,5060,7039,11126,11349,12846,13618,16930,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	61802006	61806528	chr11:61802006-61806528	1	-	61802410	61804810	789624	6	456,126,80,97,98,1844,	0,794,1025,1356,1663,2678,
#Partially deleted in new
chr11	61802057	61816148	chr11:61802057-61816148	1	-	61802410	61813305	789624	12	405,126,80,97,98,77,61,129,102,198,111,206,	0,743,974,1305,1612,2627,4606,8693,8916,10413,11185,13885,
#Deleted in new
chr11	61802217	61804680	chr11:61802217-61804680	1	-	61802410	61803755	789624	5	245,126,80,97,1011,	0,583,814,1145,1452,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	61802312	61815291	chr11:61802312-61815291	1	-	61802410	61813305	789624	12	150,126,80,97,98,77,61,129,102,198,111,496,	0,488,719,1050,1357,2372,4351,8438,8661,10158,10930,12483,
#Partially deleted in new
chr11	61802835	61812483	chr11:61802835-61812483	0	-	61802835	61802835	8553170	8	91,80,97,98,65,153,102,7,	0,196,527,834,1849,7891,8138,9641,
#Partially deleted in new
chr11	61803425	61810885	chr11:61803425-61810885	0	-	61803425	61810852	789624	5	34,98,77,61,135,	0,244,1259,3238,7325,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	61810741	61816771	chr11:61810741-61816771	0	-	61811819	61816771	789624	6	138,102,160,198,111,217,	0,232,1077,1729,2501,5813,
#Partially deleted in new
chr11	61810747	61816460	chr11:61810747-61816460	0	-	61810747	61813305	789624	5	132,102,198,111,199,	0,226,1723,2495,5514,
#Partially deleted in new
chr11	61810750	61815132	chr11:61810750-61815132	0	-	61810750	61813305	789624	5	129,102,198,111,169,	0,223,1720,2492,4213,
#Partially deleted in new
chr11	61810783	61815148	chr11:61810783-61815148	0	-	61810783	61813305	789624	5	96,102,198,111,75,	0,190,1687,2459,4290,
#Partially deleted in new
chr11	61810825	61829318	chr11:61810825-61829318	0	-	61810825	61813305	789624	5	54,102,198,111,118,	0,148,1645,2417,18375,
#Partially deleted in new
chr11	61810972	61816778	chr11:61810972-61816778	0	-	61810972	61816778	789624	3	103,198,224,	0,1498,5582,
#Partially deleted in new
chr11	61810999	61816108	chr11:61810999-61816108	0	-	61810999	61813305	789624	4	76,198,111,182,	0,1471,2243,4927,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	61811004	61816461	chr11:61811004-61816461	0	-	61811004	61813305	789624	4	71,198,326,45,	0,1466,2238,5412,
#Partially deleted in new
chr11	61811009	61817197	chr11:61811009-61817197	0	-	61811009	61813305	789624	4	66,198,111,206,	0,1461,2233,5982,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	61812471	61815111	chr11:61812471-61815111	0	-	61812471	61813305	789624	3	197,111,255,	0,771,2385,
#Partially deleted in new
chr11	61812588	61829309	chr11:61812588-61829309	0	-	61812588	61813305	789624	4	80,111,259,109,	0,654,15861,16612,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	61813256	61816148	chr11:61813256-61816148	0	-	61813256	61813305	789624	3	97,114,363,	0,198,2529,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	61813502	61814649	chr11:61813502-61814649	0	-	61813502	61813502	8553170	2	66,508,	0,639,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	61814338	61816602	chr11:61814338-61816602	0	-	61814338	61814338	8553170	2	1796,48,	0,2216,
#Deleted in new
chr11	61815160	61815240	chr11:61815160-61815240	3	-	61815160	61815160	5263520	1	80,	0,
#Partially deleted in new
chr11	61816255	61867354	chr11:61816255-61867354	1	+	61816285	61865689	789624	12	171,111,198,102,126,61,77,98,97,80,126,1717,	0,21522,24078,24368,31903,40755,41198,46716,47026,47451,48896,49382,
#Partially deleted in new
chr11	61816402	61826512	chr11:61816402-61826512	1	+	61826085	61826398	789624	3	24,106,230,	0,9629,9880,
#Partially deleted in new
chr11	61816403	61865957	chr11:61816403-61865957	1	+	61816582	61865689	789624	12	293,111,198,102,126,61,77,98,97,80,126,320,	0,21374,23930,24220,31755,40607,41050,46568,46878,47303,48748,49234,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	61816545	61826512	chr11:61816545-61826512	1	+	61816582	61821425	789624	3	151,88,230,	0,4835,9737,
#Partially deleted in new
chr11	61827391	61848217	chr11:61827391-61848217	0	+	61840381	61848217	789624	5	40,111,198,102,59,	0,10386,12942,13232,20767,
#Partially deleted in new
chr11	61827760	61867354	chr11:61827760-61867354	3	+	61828390	61865689	789624	12	837,111,198,102,126,61,77,98,97,80,126,1717,	0,10017,12573,12863,20398,29250,29693,35211,35521,35946,37391,37877,
#Partially deleted in new
chr11	61828178	61848186	chr11:61828178-61848186	0	+	61840381	61848186	789624	6	46,103,111,198,102,28,	0,316,9599,12155,12445,19980,
#Partially deleted in new
chr11	61828279	61864221	chr11:61828279-61864221	1	+	61828390	61863790	789624	10	318,111,198,102,126,61,77,98,97,515,	0,9498,12054,12344,19879,28731,29174,34692,35002,35427,
#Partially deleted in new
chr11	61840296	61863077	chr11:61840296-61863077	0	+	61848242	61863077	789624	5	429,126,61,77,106,	0,7862,16714,17157,22675,
#Partially deleted in new
chr11	61840641	61848164	chr11:61840641-61848164	0	+	61840641	61840641	8553170	2	84,344,	0,7179,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	61846590	61863786	chr11:61846590-61863786	0	+	61848242	61863786	789624	6	1694,61,77,98,97,80,	0,10420,10863,16381,16691,17116,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	61848163	61849800	chr11:61848163-61849800	0	+	61848163	61848163	8553170	3	121,181,52,	0,517,1585,
#Partially deleted in new
chr11	61854186	61867347	chr11:61854186-61867347	0	+	61854186	61854186	8553170	7	2885,77,98,97,80,126,1710,	0,3267,8785,9095,9520,10965,11451,
#Partially deleted in new
chr11	61861972	61865319	chr11:61861972-61865319	0	+	61861972	61861972	8553170	3	1406,80,168,	0,1734,3179,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	61873518	61892051	chr11:61873518-61892051	1	-	61873813	61879461	789624	12	347,153,80,97,98,77,61,123,102,198,111,193,	0,2332,2592,2840,3347,3992,4636,4993,5227,5793,6522,18340,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	61873523	61882526	chr11:61873523-61882526	0	-	61873523	61873523	8553170	8	342,126,80,1857,123,102,198,2486,	0,2327,2587,2835,4988,5222,5788,6517,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	61873525	61891534	chr11:61873525-61891534	3	-	61873813	61891381	789624	12	340,126,80,97,98,77,61,123,102,198,111,366,	0,2325,2585,2833,3340,3985,4629,4986,5220,5786,6515,17643,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	61873526	61880702	chr11:61873526-61880702	0	-	61873526	61873526	8553170	10	339,126,86,605,77,61,123,102,198,662,	0,2324,2578,2832,3984,4628,4985,5219,5785,6514,
#Partially deleted in new
chr11	61873734	61878582	chr11:61873734-61878582	0	-	61873813	61878582	789624	8	131,153,80,97,98,77,61,71,	0,2116,2376,2624,3131,3776,4420,4777,
#Partially deleted in new
chr11	61873759	61876871	chr11:61873759-61876871	0	-	61873813	61876871	789624	5	106,126,80,85,6,	0,2091,2351,2611,3106,
#Partially deleted in new
chr11	61873813	61891381	chr11:61873813-61891381	1	-	61873813	61891381	789624	12	52,126,80,97,98,77,61,123,102,114,111,213,	0,2037,2297,2545,3052,3697,4341,4698,4932,5582,6227,17355,
#Partially deleted in new
chr11	61876877	61880463	chr11:61876877-61880463	0	-	61876877	61879461	789624	8	86,77,61,123,102,198,111,83,	0,633,1277,1634,1868,2434,3163,3503,
#Partially deleted in new
chr11	61876911	61886331	chr11:61876911-61886331	0	-	61876911	61879461	789624	8	52,77,61,123,102,198,111,76,	0,599,1243,1600,1834,2400,3129,9344,
#Partially deleted in new
chr11	61877445	61879433	chr11:61877445-61879433	0	-	61877445	61877445	8553170	5	142,61,123,102,122,	0,709,1066,1300,1866,
#Partially deleted in new
chr11	61877583	61891454	chr11:61877583-61891454	0	-	61877583	61877583	8553170	6	632,123,102,198,111,286,	0,928,1162,1728,2457,13585,
#Deleted in new
chr11	61878215	61878278	chr11:61878215-61878278	3	-	61878215	61878215	5263520	1	63,	0,
#Partially deleted in new
chr11	61878640	61880193	chr11:61878640-61880193	0	-	61878640	61878640	8553170	3	207,198,153,	0,671,1400,
#Deleted in new
chr11	61890212	61891507	chr11:61890212-61891507	0	-	61890212	61890212	8553170	2	191,339,	0,956,
#Partially deleted in new
chr11	61897300	61920269	chr11:61897300-61920269	1	-	61898277	61920192	0	9	1060,67,100,113,129,78,96,253,229,	0,2013,5141,7245,7453,10092,10264,10753,22740,
#Partially deleted in new
chr11	61897300	61917525	chr11:61897300-61917525	3	-	61898277	61917367	0	10	1060,67,100,113,129,219,78,96,253,169,	0,2013,5141,7245,7453,9165,10092,10264,10753,20056,
#Deleted in new
chr11	61897839	61899338	chr11:61897839-61899338	0	-	61898277	61899338	789624	3	521,90,25,	0,1002,1474,
#Deleted in new
chr11	61897928	61899739	chr11:61897928-61899739	0	-	61897928	61897928	8553170	2	432,426,	0,1385,
#Partially deleted in new
chr11	61902509	61904702	chr11:61902509-61904702	0	-	61902509	61902509	8553170	2	32,157,	0,2036,
#Partially deleted in new
chr11	61906472	61920267	chr11:61906472-61920267	0	-	61906472	61920192	789624	5	212,78,96,253,227,	0,920,1092,1581,13568,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	61937893	61938000	chr11:61937893-61938000	3	+	61937893	61937893	8553170	1	107,	0,
#Partially deleted in new
chr11	61949820	61964461	chr11:61949820-61964461	3	+	61951806	61964122	789624	11	607,188,95,234,155,78,153,81,152,639,358,	0,1950,5286,5897,7023,7566,8325,9677,10071,12434,14283,
#Partially deleted in new
chr11	61950062	61963344	chr11:61950062-61963344	1	+	61955788	61962259	789624	5	365,95,45,234,1090,	0,5044,5280,5655,12192,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	61950352	61958929	chr11:61950352-61958929	0	+	61950352	61950352	8553170	6	75,95,234,155,78,784,	0,4754,5365,6491,7034,7793,
#Partially deleted in new
chr11	61950355	61956866	chr11:61950355-61956866	0	+	61950355	61950355	8553170	4	72,188,845,23,	0,1415,4751,6488,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	61950359	61964294	chr11:61950359-61964294	0	+	61950359	61950359	8553170	7	68,845,155,78,1433,3002,191,	0,4747,6484,7027,7786,9532,13744,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	61950359	61964461	chr11:61950359-61964461	0	+	61951806	61962259	789624	11	68,188,95,234,155,78,356,81,152,639,358,	0,1411,4747,5358,6484,7027,7786,9138,9532,11895,13744,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	61950369	61965515	chr11:61950369-61965515	1	+	61955134	61963149	789624	9	58,95,234,155,78,153,81,152,3261,	0,4737,5348,6474,7017,7776,9128,9522,11885,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	61955156	61962371	chr11:61955156-61962371	1	+	61955788	61962259	789624	9	45,45,234,155,78,356,81,152,117,	0,186,561,1687,2230,2989,4341,4735,7098,
#Partially deleted in new
chr11	61959717	61967631	chr11:61959717-61967631	1	-	61959732	61967425	789624	2	210,320,	0,7594,
#Partially deleted in new
chr11	61959717	61967631	chr11:61959717-61967631	1	-	61959772	61967425	789624	2	187,320,	0,7594,
#Partially deleted in new
chr11	61959821	61967631	chr11:61959821-61967631	0	-	61959821	61967425	789624	3	83,147,320,	0,5547,7490,
#Partially deleted in new
chr11	61964284	61967660	chr11:61964284-61967660	3	-	61964726	61967425	0	4	607,126,147,349,	0,702,1084,3027,
#Partially deleted in new
chr11	61964565	61967631	chr11:61964565-61967631	0	-	61965078	61967425	789624	4	326,119,147,320,	0,421,803,2746,
#Partially deleted in new
chr11	61964565	61967633	chr11:61964565-61967633	0	-	61965538	61967425	789624	4	326,126,209,322,	0,421,803,2746,
#Partially deleted in new
chr11	61964565	61967631	chr11:61964565-61967631	1	-	61964726	61967425	0	5	326,126,147,142,84,	0,421,803,2746,2982,
#Partially deleted in new
chr11	61964584	61967607	chr11:61964584-61967607	1	-	61964726	61967425	789624	4	307,126,147,206,	0,402,784,2817,
#Partially deleted in new
chr11	61964600	61967166	chr11:61964600-61967166	1	-	61964726	61965419	789624	4	291,126,147,178,	0,386,768,2388,
#Partially deleted in new
chr11	61964746	61967586	chr11:61964746-61967586	0	-	61964746	61964746	8553170	3	366,147,275,	0,622,2565,
#Partially deleted in new
chr11	61964837	61967613	chr11:61964837-61967613	0	-	61964837	61964837	8553170	3	54,529,302,	0,149,2474,
#Partially deleted in new
chr11	61964988	61967631	chr11:61964988-61967631	0	-	61964988	61965419	789624	4	124,209,60,174,	0,380,2323,2469,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	61967793	61969490	chr11:61967793-61969490	3	+	61967793	61967793	8553170	1	1697,	0,
#Deleted in new
chr11	62011750	62012602	chr11:62011750-62012602	7	-	62011750	62011750	16724991	1	852,	0,
#Deleted in new
chr11	62072881	62073052	chr11:62072881-62073052	7	-	62072881	62072881	16724991	1	171,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	62077276	62082184	chr11:62077276-62082184	3	-	62077276	62077276	8553170	2	217,571,	0,4337,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	62116469	62123767	chr11:62116469-62123767	3	-	62116469	62116469	8553170	2	877,111,	0,7187,
#Partially deleted in new
chr11	62123972	62152981	chr11:62123972-62152981	1	+	62128161	62151976	0	19	191,151,114,809,52,58,118,52,118,132,12,110,121,123,245,79,108,151,1220,	0,4178,4797,5809,13859,14740,14915,16261,16731,16940,17527,21009,21196,21656,22685,24503,24766,26084,27789,
#Partially deleted in new
chr11	62123997	62152752	chr11:62123997-62152752	3	+	62128161	62151976	0	18	166,151,114,809,52,58,118,52,118,132,110,121,123,245,79,108,151,991,	0,4153,4772,5784,13834,14715,14890,16236,16706,16915,20984,21171,21631,22660,24478,24741,26059,27764,
#Partially deleted in new
chr11	62123997	62130028	chr11:62123997-62130028	0	+	62128161	62130028	789624	4	58,151,114,247,	0,4153,4772,5784,
#Partially deleted in new
chr11	62124010	62137976	chr11:62124010-62137976	0	+	62124010	62124010	8553170	5	153,151,114,809,145,	0,4140,4759,5771,13821,
#Partially deleted in new
chr11	62130558	62141745	chr11:62130558-62141745	0	+	62130558	62130558	8553170	8	32,52,58,118,52,118,132,246,	0,7273,8154,8329,9675,10145,10354,10941,
#Deleted in new
chr11	62152481	62153163	chr11:62152481-62153163	0	+	62152481	62152481	8553170	2	70,491,	0,191,
#Deleted in new
chr11	62169292	62169828	chr11:62169292-62169828	7	+	62169292	62169292	16724991	1	536,	0,
#Deleted in new
chr11	62190215	62193539	chr11:62190215-62193539	3	+	62190284	62193428	789624	3	124,188,141,	0,1840,3183,
#Partially deleted in new
chr11	62208667	62213939	chr11:62208667-62213939	3	+	62208731	62213770	789624	3	119,188,214,	0,1745,5058,
#Partially deleted in new
chr11	62242209	62244808	chr11:62242209-62244808	3	+	62242307	62244699	789624	3	153,188,139,	0,1079,2460,
#Partially deleted in new
chr11	62270154	62273156	chr11:62270154-62273156	3	+	62270216	62272995	789624	3	117,188,200,	0,726,2802,
#Partially deleted in new
chr11	62270157	62272071	chr11:62270157-62272071	1	+	62270216	62271188	789624	2	114,1191,	0,723,
#Partially deleted in new
chr11	62296276	62299064	chr11:62296276-62299064	3	-	62296409	62299010	789624	3	143,187,109,	0,1195,2679,
#Deleted in new
chr11	62330945	62331813	chr11:62330945-62331813	7	+	62330945	62330945	16724991	1	868,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	62336910	62338090	chr11:62336910-62338090	3	-	62336910	62336910	8553170	2	305,180,	0,1000,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	62337447	62393412	chr11:62337447-62393412	3	+	62337977	62392284	0	7	127,278,143,158,119,111,1334,	0,442,18877,19539,51685,54074,54631,
#Partially deleted in new
chr11	62337450	62389826	chr11:62337450-62389826	0	+	62337977	62357009	789624	4	124,201,158,694,	0,516,19536,51682,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	62337452	62393406	chr11:62337452-62393406	1	+	62337977	62392284	0	7	122,201,143,158,119,111,1328,	0,514,18872,19534,51680,54069,54626,
#Deleted in new
chr11	62337458	62338338	chr11:62337458-62338338	0	+	62337458	62337458	8553170	2	116,449,	0,431,
#Partially deleted in new
chr11	62337469	62389165	chr11:62337469-62389165	0	+	62337977	62357009	789624	4	105,278,158,33,	0,420,19517,51663,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	62337492	62392568	chr11:62337492-62392568	1	+	62337977	62357009	789624	6	82,201,158,119,111,490,	0,474,19494,51640,54029,54586,
#Partially deleted in new
chr11	62337494	62357201	chr11:62337494-62357201	1	+	62337977	62357148	789624	4	80,201,143,215,	0,472,18830,19492,
#Partially deleted in new
chr11	62337502	62357132	chr11:62337502-62357132	0	+	62338055	62357132	789624	4	72,174,143,146,	0,491,18822,19484,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	62357052	62383247	chr11:62357052-62383247	0	+	62357052	62381875	789624	2	92,1451,	0,24744,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	62371145	62373168	chr11:62371145-62373168	7	+	62371145	62371145	16724991	3	283,73,1201,	0,450,822,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	62391497	62392585	chr11:62391497-62392585	0	+	62391497	62391497	8553170	2	135,507,	0,581,
#Partially deleted in new
chr11	62391515	62393372	chr11:62391515-62393372	3	-	62391515	62391515	8553170	2	98,492,	0,1365,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	62391896	62392568	chr11:62391896-62392568	0	+	62391896	62391896	8553170	2	38,490,	0,182,
#Partially deleted in new
chr11	62405102	62423195	chr11:62405102-62423195	1	+	62422270	62423091	789624	4	67,74,188,137,	0,11461,17118,17956,
#Partially deleted in new
chr11	62419034	62423195	chr11:62419034-62423195	3	+	62419095	62423091	789624	3	116,188,137,	0,3186,4024,
#Partially deleted in new
chr11	62421844	62426724	chr11:62421844-62426724	3	-	62421844	62421844	8553170	2	472,38,	0,4842,
#Partially deleted in new
chr11	62433541	62536107	chr11:62433541-62536107	1	-	62433837	62536098	789624	3	350,188,163,	0,101461,102403,
#Partially deleted in new
chr11	62433545	62546796	chr11:62433545-62546796	3	-	62433883	62536098	0	6	346,100,188,154,99,137,	0,58186,101457,102399,102923,113114,
#Partially deleted in new
chr11	62433546	62517357	chr11:62433546-62517357	0	-	62433546	62433546	8553170	3	345,100,348,	0,58185,83463,
#Partially deleted in new
chr11	62491810	62545687	chr11:62491810-62545687	0	-	62491810	62536098	789624	5	21,188,154,99,122,	0,43192,44134,44658,53755,
#Partially deleted in new
chr11	62515904	62546835	chr11:62515904-62546835	1	-	62516743	62536098	0	5	18170,188,154,99,176,	0,19098,20040,20564,30755,
#Partially deleted in new
chr11	62533983	62556235	chr11:62533983-62556235	0	-	62533983	62536098	789624	5	91,188,154,99,48,	0,1019,1961,2485,22204,
#Partially deleted in new
chr11	62534045	62545663	chr11:62534045-62545663	0	-	62534045	62536098	789624	5	29,188,154,99,98,	0,957,1899,2423,11520,
#Partially deleted in new
chr11	62535087	62546833	chr11:62535087-62546833	0	-	62535087	62536098	789624	5	103,154,49,99,174,	0,857,1151,1381,11572,
#Deleted in new
chr11	62545998	62547699	chr11:62545998-62547699	3	+	62545998	62545998	8553170	2	72,319,	0,1382,
#Partially deleted in new
chr11	62559600	62573973	chr11:62559600-62573973	3	-	62559678	62573842	0	10	237,125,173,205,130,144,143,64,159,143,	0,468,681,7205,7798,11364,11939,12237,12983,14230,
#Partially deleted in new
chr11	62559602	62591531	chr11:62559602-62591531	3	-	62574804	62591485	789624	17	235,125,173,205,130,144,143,64,2325,93,111,110,470,101,316,191,128,	0,466,679,7203,7796,11362,11937,12235,12981,17054,17304,17579,18958,21503,21783,29428,31801,
#Partially deleted in new
chr11	62559602	62573860	chr11:62559602-62573860	0	-	62559602	62559602	8553170	9	235,125,173,205,130,144,143,64,1277,	0,466,679,7203,7796,11362,11937,12235,12981,
#Partially deleted in new
chr11	62559602	62577321	chr11:62559602-62577321	0	-	62559602	62559602	8553170	13	235,125,173,205,130,144,143,64,159,232,93,111,140,	0,466,679,7203,7796,11362,11937,12235,12981,15074,17054,17304,17579,
#Partially deleted in new
chr11	62567010	62567071	chr11:62567010-62567071	3	-	62567010	62567010	5263520	1	61,	0,
#Partially deleted in new
chr11	62567398	62572743	chr11:62567398-62572743	0	-	62567398	62567398	8553170	5	130,144,59,64,160,	0,3566,4225,4439,5185,
#Deleted in new
chr11	62571001	62574086	chr11:62571001-62574086	0	-	62571001	62571001	8553170	5	107,143,64,159,105,	0,538,836,1582,2980,
#Partially deleted in new
chr11	62573885	62576852	chr11:62573885-62576852	0	-	62573885	62573885	8553170	3	118,232,196,	0,791,2771,
#Partially deleted in new
chr11	62575044	62591637	chr11:62575044-62591637	1	-	62575093	62591599	789624	9	1200,93,111,110,470,101,316,191,234,	0,1612,1862,2137,3516,6061,6341,13986,16359,
#Partially deleted in new
chr11	62575047	62592177	chr11:62575047-62592177	3	-	62575093	62591485	0	9	1197,93,111,110,470,101,316,191,774,	0,1609,1859,2134,3513,6058,6338,13983,16356,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	62575057	62577257	chr11:62575057-62577257	0	-	62575057	62575057	8553170	2	1960,76,	0,2124,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	62576243	62577316	chr11:62576243-62577316	0	-	62576243	62576243	8553170	3	506,111,135,	0,663,938,
#Partially deleted in new
chr11	62578808	62591523	chr11:62578808-62591523	0	-	62578808	62591485	789624	3	222,191,120,	0,10222,12595,
#Partially deleted in new
chr11	62581107	62591612	chr11:62581107-62591612	0	-	62581107	62589045	789624	4	99,316,191,93,	0,278,7923,10412,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	62581491	62591523	chr11:62581491-62591523	0	-	62582562	62591485	789624	4	210,122,191,120,	0,979,7539,9912,
#Partially deleted in new
chr11	62593213	62601840	chr11:62593213-62601840	3	-	62593874	62601450	789624	18	827,149,119,90,229,140,98,59,75,189,100,103,118,64,118,94,68,418,	0,1045,1302,1767,2050,2538,2796,3065,3244,3423,4102,4396,4810,5113,5308,6952,7408,8209,
#Partially deleted in new
chr11	62593214	62599317	chr11:62593214-62599317	1	-	62593874	62597683	789624	16	826,149,119,90,229,140,98,59,75,189,100,103,118,64,118,100,	0,1044,1301,1766,2049,2537,2795,3064,3243,3422,4101,4395,4809,5112,5307,6003,
#Partially deleted in new
chr11	62593841	62601275	chr11:62593841-62601275	1	-	62593874	62597683	789624	18	199,149,119,90,229,140,98,59,75,189,100,103,118,64,118,94,68,253,	0,417,674,1139,1422,1910,2168,2437,2616,2795,3474,3768,4182,4485,4680,6324,6780,7181,
#Deleted in new
chr11	62595747	62596661	chr11:62595747-62596661	0	-	62595747	62595747	8553170	3	144,98,383,	0,262,531,
#Partially deleted in new
chr11	62596765	62598129	chr11:62596765-62598129	0	-	62596765	62596765	8553170	3	60,397,106,	0,550,1258,
#Deleted in new
chr11	62598108	62601487	chr11:62598108-62601487	0	-	62598108	62598108	8553170	5	282,118,94,68,65,	0,413,2057,2513,3314,
#Deleted in new
chr11	62598288	62600346	chr11:62598288-62600346	0	-	62598288	62598288	8553170	2	351,181,	0,1877,
#Partially deleted in new
chr11	62602217	62612765	chr11:62602217-62612765	3	-	62602474	62612457	789624	22	461,131,99,88,98,89,68,132,126,152,142,156,96,111,70,171,124,68,114,258,172,330,	0,541,931,1511,1726,1895,2895,3424,3637,3845,4740,5448,5983,6324,6518,6744,7136,7411,8661,8869,9207,10218,
#Deleted in new
chr11	62602217	62603738	chr11:62602217-62603738	0	-	62602474	62603738	789624	3	562,99,10,	0,931,1511,
#Partially deleted in new
chr11	62602218	62612524	chr11:62602218-62612524	1	-	62602474	62612457	789624	22	460,131,99,88,98,89,68,132,126,152,142,156,96,111,70,171,124,68,114,261,172,89,	0,540,930,1510,1725,1894,2894,3423,3636,3844,4739,5447,5982,6323,6517,6743,7135,7410,8660,8868,9206,10217,
#Partially deleted in new
chr11	62602218	62611596	chr11:62602218-62611596	0	-	62602301	62611596	789624	21	460,21,99,88,98,89,68,132,126,152,142,156,96,111,70,171,124,68,114,261,172,	0,540,930,1510,1725,1894,2894,3423,3636,3844,4739,5447,5982,6323,6517,6743,7135,7410,8660,8868,9206,
#Partially deleted in new
chr11	62602219	62606212	chr11:62602219-62606212	0	-	62602219	62602219	8553170	8	459,489,88,258,68,132,126,150,	0,539,1509,1724,2893,3422,3635,3843,
#Partially deleted in new
chr11	62602219	62611680	chr11:62602219-62611680	1	-	62602301	62611531	789624	21	459,21,99,88,98,89,68,132,126,152,142,156,96,111,70,171,124,68,114,261,256,	0,539,929,1509,1724,1893,2893,3422,3635,3843,4738,5446,5981,6322,6516,6742,7134,7409,8659,8867,9205,
#Partially deleted in new
chr11	62602219	62612530	chr11:62602219-62612530	1	-	62602301	62612457	789624	22	459,21,99,88,98,89,68,132,126,152,142,156,96,111,70,171,124,68,114,258,172,95,	0,539,929,1509,1724,1893,2893,3422,3635,3843,4738,5446,5981,6322,6516,6742,7134,7409,8659,8867,9205,10216,
#Partially deleted in new
chr11	62602219	62611007	chr11:62602219-62611007	1	-	62602474	62609460	789624	19	459,131,99,88,98,89,68,132,126,152,142,156,96,111,70,171,124,68,129,	0,539,929,1509,1724,1893,2893,3422,3635,3843,4738,5446,5981,6322,6516,6742,7134,7409,8659,
#Partially deleted in new
chr11	62602225	62612381	chr11:62602225-62612381	0	-	62609401	62611531	789624	21	453,131,99,88,98,89,68,132,126,152,142,156,96,111,70,171,124,68,76,258,957,	0,533,923,1503,1718,1887,2887,3416,3629,3837,4732,5440,5975,6316,6510,6736,7128,7403,8653,8861,9199,
#Partially deleted in new
chr11	62603115	62605229	chr11:62603115-62605229	0	-	62603115	62603115	8553170	5	132,88,98,89,117,	0,613,828,997,1997,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	62604072	62607392	chr11:62604072-62607392	0	-	62604072	62604072	8553170	6	129,68,132,126,152,435,	0,1040,1569,1782,1990,2885,
#Deleted in new
chr11	62604707	62605682	chr11:62604707-62605682	0	-	62604707	62604707	8553170	2	473,41,	0,934,
#Partially deleted in new
chr11	62605595	62607082	chr11:62605595-62607082	0	-	62605595	62605595	8553170	4	178,126,152,125,	0,259,467,1362,
#Partially deleted in new
chr11	62605836	62607042	chr11:62605836-62607042	0	-	62605836	62605836	8553170	2	378,85,	0,1121,
#Partially deleted in new
chr11	62605909	62607993	chr11:62605909-62607993	0	-	62605909	62605909	8553170	4	71,152,142,128,	0,153,1048,1956,
#Deleted in new
chr11	62606160	62606405	chr11:62606160-62606405	3	+	62606160	62606160	8553170	2	72,20,	0,225,
#Deleted in new
chr11	62610975	62612376	chr11:62610975-62612376	0	-	62610975	62611531	789624	4	17,258,172,152,	0,111,449,1249,
#Deleted in new
chr11	62610976	62612280	chr11:62610976-62612280	0	-	62610976	62611531	789624	4	16,261,172,116,	0,110,448,1188,
#Deleted in new
chr11	62611111	62612746	chr11:62611111-62612746	0	-	62611111	62611531	789624	3	233,172,173,	0,313,1462,
#Deleted in new
chr11	62611721	62614471	chr11:62611721-62614471	2	+	62614295	62614471	789624	2	370,214,	0,2536,
#Deleted in new
chr11	62611785	62615100	chr11:62611785-62615100	1	+	62614295	62614729	789624	3	135,247,480,	0,2472,2835,
#Deleted in new
chr11	62612411	62612742	chr11:62612411-62612742	0	+	62612411	62612411	8553170	2	220,29,	0,302,
#Deleted in new
chr11	62612740	62615120	chr11:62612740-62615120	1	+	62613281	62614839	789624	3	1131,247,500,	0,1517,1880,
#Deleted in new
chr11	62613528	62614713	chr11:62613528-62614713	0	+	62614295	62614713	789624	3	247,247,93,	0,729,1092,
#Partially deleted in new
chr11	62615295	62622175	chr11:62615295-62622175	3	-	62615700	62621947	0	5	504,291,361,175,310,	0,1210,1691,5201,6570,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	62615296	62622154	chr11:62615296-62622154	1	-	62616185	62621947	789624	5	940,291,361,175,289,	0,1209,1690,5200,6569,
#Partially deleted in new
chr11	62615450	62621984	chr11:62615450-62621984	0	-	62621258	62621947	789624	6	349,291,361,175,239,119,	0,1055,1536,5046,5604,6415,
#Deleted in new
chr11	62616688	62617454	chr11:62616688-62617454	0	-	62616688	62616688	8553170	2	108,468,	0,298,
#Partially deleted in new
chr11	62617004	62622146	chr11:62617004-62622146	0	-	62617004	62621947	789624	4	343,175,69,281,	0,3492,4050,4861,
#Partially deleted in new
chr11	62624825	62646615	chr11:62624825-62646615	1	-	62625814	62646599	789624	25	1099,101,113,114,75,77,65,244,102,97,144,80,127,236,154,181,97,88,70,66,180,128,109,105,54,	0,1239,1509,1745,2034,2222,2463,3943,4368,4762,4988,5371,5553,5775,6204,7739,8179,8358,8619,9484,9995,14157,14533,14801,21736,
#Partially deleted in new
chr11	62624825	62646602	chr11:62624825-62646602	0	-	62639094	62646599	789624	23	1099,101,113,114,75,77,65,244,102,97,144,80,127,236,154,181,97,88,70,180,128,105,41,	0,1239,1509,1745,2034,2222,2463,3943,4368,4762,4988,5371,5553,5775,6204,7739,8179,8358,8619,9995,14157,14801,21736,
#Partially deleted in new
chr11	62624831	62646726	chr11:62624831-62646726	1	-	62625814	62639071	789624	23	1093,101,113,114,75,77,65,244,102,97,144,80,127,236,154,181,97,88,70,180,128,105,165,	0,1233,1503,1739,2028,2216,2457,3937,4362,4756,4982,5365,5547,5769,6198,7733,8173,8352,8613,9989,14151,14795,21730,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr11	62624950	62646606	chr11:62624950-62646606	1	-	62625814	62639071	789624	25	974,101,113,114,75,77,65,244,102,97,144,80,127,236,154,181,97,88,70,180,128,109,105,140,45,	0,1114,1384,1620,1909,2097,2338,3818,4243,4637,4863,5246,5428,5650,6079,7614,8054,8233,8494,9870,14032,14408,14676,14979,21611,
#Partially deleted in new
chr11	62625058	62646616	chr11:62625058-62646616	3	-	62625814	62646599	789624	24	866,101,113,114,75,77,65,244,102,97,144,80,127,236,154,181,97,88,70,180,128,109,105,55,	0,1006,1276,1512,1801,1989,2230,3710,4135,4529,4755,5138,5320,5542,5971,7506,7946,8125,8386,9762,13924,14300,14568,21503,
#Deleted in new
chr11	62625730	62626770	chr11:62625730-62626770	0	-	62625730	62625730	8553170	4	194,101,113,200,	0,334,604,840,
#Partially deleted in new
chr11	62625780	62646632	chr11:62625780-62646632	1	-	62625814	62646599	789624	22	144,101,113,114,75,77,65,244,102,97,144,80,127,236,154,181,97,88,70,66,180,71,	0,284,554,790,1079,1267,1508,2988,3413,3807,4033,4416,4598,4820,5249,6784,7224,7403,7664,8529,9040,20781,
#Deleted in new
chr11	62626399	62627111	chr11:62626399-62627111	0	-	62626399	62626399	8553170	3	48,114,252,	0,171,460,
#Deleted in new
chr11	62632592	62633930	chr11:62632592-62633930	0	-	62632592	62632592	8553170	4	153,97,88,486,	0,412,591,852,
#Partially deleted in new
chr11	62633027	62639467	chr11:62633027-62639467	0	-	62633027	62633027	8553170	6	74,84,127,180,128,109,	0,156,413,1793,5955,6331,
#Partially deleted in new
chr11	62633056	62646616	chr11:62633056-62646616	0	-	62639094	62646599	789624	8	45,88,70,66,180,128,105,55,	0,127,388,1253,1764,5926,6570,13505,
#Partially deleted in new
chr11	62633441	62646632	chr11:62633441-62646632	0	-	62633441	62646599	789624	4	73,66,180,71,	0,868,1379,13120,
#Partially deleted in new
chr11	62634570	62639471	chr11:62634570-62639471	0	-	62634570	62634570	8553170	3	430,128,113,	0,4412,4788,
#Partially deleted in new
chr11	62634752	62646613	chr11:62634752-62646613	0	-	62639094	62646599	789624	4	248,128,105,52,	0,4230,4874,11809,
#Partially deleted in new
chr11	62634788	62646606	chr11:62634788-62646606	0	-	62634788	62634788	8553170	2	212,45,	0,11773,
#Partially deleted in new
chr11	62634823	62646623	chr11:62634823-62646623	0	-	62639375	62646599	789624	5	177,128,109,101,62,	0,4159,4535,4807,11738,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	62634895	62646617	chr11:62634895-62646617	0	-	62634895	62634895	8553170	6	105,128,109,105,137,56,	0,4087,4463,4731,5034,11666,
#Partially deleted in new
chr11	62646847	62653302	chr11:62646847-62653302	3	-	62647019	62653249	789624	2	3152,133,	0,6322,
#Partially deleted in new
chr11	62649693	62665178	chr11:62649693-62665178	3	-	62649961	62665169	789624	4	306,98,125,48,	0,13542,15155,15437,
#Partially deleted in new
chr11	62662815	62665217	chr11:62662815-62665217	3	-	62663049	62665169	789624	4	344,98,125,87,	0,420,2033,2315,
#Partially deleted in new
chr11	62662816	62671769	chr11:62662816-62671769	3	-	62663128	62670031	789624	7	343,98,125,225,163,160,206,	0,419,2032,4706,6824,7065,8747,
#Partially deleted in new
chr11	62662816	62665181	chr11:62662816-62665181	0	-	62662816	62662816	789624	3	343,98,333,	0,419,2032,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	62662817	62671765	chr11:62662817-62671765	1	-	62663128	62670031	789624	5	342,98,125,225,2125,	0,418,2031,4705,6823,
#Partially deleted in new
chr11	62662847	62671540	chr11:62662847-62671540	1	-	62663128	62670031	789624	7	312,98,125,225,163,284,301,	0,388,2001,4675,6793,7034,8392,
#Partially deleted in new
chr11	62663114	62665191	chr11:62663114-62665191	1	-	62663128	62665169	789624	3	219,125,61,	0,1734,2016,
#Partially deleted in new
chr11	62664885	62671774	chr11:62664885-62671774	0	-	62664885	62671747	789624	5	88,225,163,134,211,	0,2637,4755,4996,6678,
#Partially deleted in new
chr11	62665308	62667397	chr11:62665308-62667397	0	+	62665308	62665308	8553170	3	24,300,1044,	0,338,1045,
#Partially deleted in new
chr11	62665308	62668108	chr11:62665308-62668108	3	+	62665879	62667051	789624	3	24,300,1713,	0,338,1087,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	62665312	62668496	chr11:62665312-62668496	0	+	62665312	62665312	8553170	2	20,2850,	0,334,
#Deleted in new
chr11	62665335	62665711	chr11:62665335-62665711	0	+	62665335	62665335	8553170	1	376,	0,
#Deleted in new
chr11	62665421	62665570	chr11:62665421-62665570	3	+	62665421	62665421	789624	1	149,	0,
#Partially deleted in new
chr11	62667214	62671614	chr11:62667214-62671614	0	-	62667214	62667214	8553170	4	533,163,160,51,	0,2426,2667,4349,
#Partially deleted in new
chr11	62667370	62671765	chr11:62667370-62671765	0	-	62667370	62667370	8553170	2	377,202,	0,4193,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	62667403	62670685	chr11:62667403-62670685	0	-	62667403	62667403	8553170	3	344,163,804,	0,2237,2478,
#Partially deleted in new
chr11	62667619	62670014	chr11:62667619-62670014	0	-	62667619	62667619	8553170	2	128,133,	0,2262,
#Partially deleted in new
chr11	62667636	62672255	chr11:62667636-62672255	0	-	62667636	62672219	789624	3	111,163,129,	0,2004,4490,
#Partially deleted in new
chr11	62669664	62671633	chr11:62669664-62671633	0	-	62669664	62671330	789624	4	139,134,149,70,	0,217,1575,1899,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	62670272	62673577	chr11:62670272-62673577	3	+	62671745	62672114	789624	3	81,582,1625,	0,1011,1680,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	62671653	62673687	chr11:62671653-62673687	1	+	62671745	62672114	789624	2	212,1735,	0,299,
#Deleted in new
chr11	62676497	62679055	chr11:62676497-62679055	1	-	62676717	62678923	789624	8	508,117,52,192,70,107,54,191,	0,1020,1283,1429,1841,1997,2192,2367,
#Deleted in new
chr11	62676497	62679090	chr11:62676497-62679090	3	-	62676589	62678923	789624	9	142,193,117,52,192,70,107,54,226,	0,315,1020,1283,1429,1841,1997,2192,2367,
#Deleted in new
chr11	62676497	62679058	chr11:62676497-62679058	0	-	62676497	62676497	8553170	5	1335,192,70,107,369,	0,1429,1841,1997,2192,
#Deleted in new
chr11	62676498	62677983	chr11:62676498-62677983	1	-	62676561	62677982	789624	4	141,117,52,57,	0,1019,1282,1428,
#Deleted in new
chr11	62676498	62679117	chr11:62676498-62679117	1	-	62676589	62678923	789624	7	141,193,117,52,192,54,253,	0,314,1019,1282,1428,2191,2366,
#Deleted in new
chr11	62676500	62679073	chr11:62676500-62679073	0	-	62676500	62676500	8553170	6	139,1020,192,70,107,384,	0,312,1426,1838,1994,2189,
#Deleted in new
chr11	62676503	62679065	chr11:62676503-62679065	1	-	62676589	62678923	789624	9	136,193,117,52,180,70,107,54,201,	0,309,1014,1277,1435,1835,1991,2186,2361,
#Deleted in new
chr11	62676516	62679067	chr11:62676516-62679067	0	-	62676516	62676516	8553170	8	123,193,315,192,70,107,54,203,	0,296,1001,1410,1822,1978,2173,2348,
#Deleted in new
chr11	62676612	62679081	chr11:62676612-62679081	0	-	62676612	62678923	789624	10	27,193,117,52,192,70,107,54,88,43,	0,200,905,1168,1314,1726,1882,2077,2252,2426,
#Deleted in new
chr11	62676896	62678537	chr11:62676896-62678537	0	-	62676896	62676896	8553170	5	109,68,192,70,43,	0,621,1030,1442,1598,
#Deleted in new
chr11	62676979	62679080	chr11:62676979-62679080	0	-	62676979	62676979	8553170	8	26,46,52,192,70,107,54,216,	0,538,801,947,1359,1515,1710,1885,
#Deleted in new
chr11	62676980	62679065	chr11:62676980-62679065	0	-	62676980	62676980	8553170	6	25,315,192,70,107,376,	0,537,946,1358,1514,1709,
#Deleted in new
chr11	62677537	62679010	chr11:62677537-62679010	0	-	62677537	62677537	8553170	7	97,93,192,70,107,54,146,	0,202,389,801,957,1152,1327,
#Deleted in new
chr11	62677804	62679058	chr11:62677804-62679058	0	-	62677804	62677804	8553170	5	314,70,107,54,194,	0,534,690,885,1060,
#Deleted in new
chr11	62677917	62679073	chr11:62677917-62679073	0	-	62677917	62677917	8553170	4	491,107,54,209,	0,577,772,947,
#Deleted in new
chr11	62678088	62679077	chr11:62678088-62679077	0	-	62678088	62678088	8553170	4	30,263,54,213,	0,250,601,776,
#Deleted in new
chr11	62678208	62679095	chr11:62678208-62679095	0	-	62678208	62678208	8553170	4	200,107,54,231,	0,286,481,656,
#Deleted in new
chr11	62678443	62679073	chr11:62678443-62679073	0	-	62678443	62678443	8553170	2	158,384,	0,246,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	62686401	62689899	chr11:62686401-62689899	3	-	62687791	62688508	789624	2	2112,473,	0,3025,
#Partially deleted in new
chr11	62690274	62727384	chr11:62690274-62727384	3	-	62707246	62727156	789624	24	247,81,81,67,142,98,135,144,82,317,216,108,74,201,169,129,123,264,113,91,140,77,136,766,	0,337,512,800,1005,2101,2388,4293,12193,15026,16834,25225,25589,26714,29748,31020,31545,31842,32326,32538,33312,33639,34016,36344,
#Partially deleted in new
chr11	62690274	62709514	chr11:62690274-62709514	1	-	62690366	62707195	789624	12	247,81,87,67,142,98,135,144,82,317,216,368,	0,337,512,800,1005,2101,2388,4293,12193,15026,16834,18872,
#Partially deleted in new
chr11	62690274	62691339	chr11:62690274-62691339	0	-	62690366	62691339	789624	5	247,120,51,67,60,	0,337,542,800,1005,
#Partially deleted in new
chr11	62690275	62706315	chr11:62690275-62706315	1	-	62690647	62705512	789624	10	246,81,81,67,98,135,144,82,317,113,	0,336,511,799,2100,2387,4292,12192,15025,15927,
#Partially deleted in new
chr11	62690275	62707398	chr11:62690275-62707398	1	-	62690366	62707195	789624	11	246,81,81,67,142,98,135,144,82,317,290,	0,336,511,799,1004,2100,2387,4292,12192,15025,16833,
#Partially deleted in new
chr11	62690275	62691178	chr11:62690275-62691178	0	-	62690275	62690275	8553170	4	246,81,81,104,	0,336,511,799,
#Partially deleted in new
chr11	62690277	62691342	chr11:62690277-62691342	0	-	62690277	62690277	8553170	3	244,81,556,	0,334,509,
#Partially deleted in new
chr11	62690280	62692749	chr11:62690280-62692749	0	-	62690366	62692749	789624	3	141,98,87,	0,2095,2382,
#Partially deleted in new
chr11	62690294	62706234	chr11:62690294-62706234	1	-	62690366	62705512	789624	11	227,81,81,67,142,98,135,144,82,317,319,	0,317,492,780,985,2081,2368,4273,12173,15006,15621,
#Partially deleted in new
chr11	62690294	62706344	chr11:62690294-62706344	3	-	62690366	62705512	789624	11	227,81,81,67,142,98,135,144,82,317,142,	0,317,492,780,985,2081,2368,4273,12173,15006,15908,
#Partially deleted in new
chr11	62690311	62707518	chr11:62690311-62707518	0	-	62691395	62707195	789624	11	210,81,81,67,142,98,76,148,82,317,410,	0,300,475,763,968,2064,2351,4252,12156,14989,16797,
#Partially deleted in new
chr11	62690314	62706344	chr11:62690314-62706344	1	-	62690366	62705512	789624	11	207,81,81,67,142,98,135,144,82,317,86,	0,297,472,760,965,2061,2348,4253,12153,14986,15944,
#Partially deleted in new
chr11	62690969	62692797	chr11:62690969-62692797	0	-	62690969	62690969	8553170	4	172,142,98,135,	0,310,1406,1693,
#Partially deleted in new
chr11	62691335	62694711	chr11:62691335-62694711	0	-	62691335	62691335	8553170	3	86,98,144,	0,1040,3232,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	62691391	62697566	chr11:62691391-62697566	0	-	62691391	62691391	8553170	5	30,98,135,144,84,	0,984,1271,3176,6091,
#Partially deleted in new
chr11	62692375	62706218	chr11:62692375-62706218	0	-	62692375	62705512	789624	6	98,135,144,82,317,216,	0,287,2192,10092,12925,13627,
#Partially deleted in new
chr11	62692409	62694712	chr11:62692409-62694712	0	-	62692409	62692409	8553170	3	64,144,145,	0,244,2158,
#Partially deleted in new
chr11	62692695	62709528	chr11:62692695-62709528	0	-	62692695	62707195	789624	4	102,144,216,382,	0,1872,14413,16451,
#Partially deleted in new
chr11	62692748	62709320	chr11:62692748-62709320	0	-	62692748	62707195	789624	6	49,144,82,317,216,57,	0,1819,9719,12552,14360,16515,
#Partially deleted in new
chr11	62694557	62706220	chr11:62694557-62706220	0	-	62694557	62694557	8553170	4	154,82,150,305,	0,7910,10910,11358,
#Partially deleted in new
chr11	62694599	62706256	chr11:62694599-62706256	0	-	62694599	62694599	8553170	4	112,82,150,54,	0,7868,10868,11603,
#Partially deleted in new
chr11	62694675	62707144	chr11:62694675-62707144	0	-	62694675	62707144	789624	3	36,82,36,	0,7792,12433,
#Partially deleted in new
chr11	62694707	62707349	chr11:62694707-62707349	0	-	62694707	62705512	789624	4	4,82,258,241,	0,7760,10593,12401,
#Deleted in new
chr11	62705335	62709731	chr11:62705335-62709731	0	-	62705335	62707195	789624	3	282,216,164,	0,1773,4232,
#Deleted in new
chr11	62705425	62709845	chr11:62705425-62709845	0	-	62705425	62707195	789624	4	192,216,108,278,	0,1683,3721,4142,
#Deleted in new
chr11	62705493	62707463	chr11:62705493-62707463	0	-	62706678	62707195	789624	3	124,99,355,	0,1119,1615,
#Deleted in new
chr11	62707110	62709845	chr11:62707110-62709845	0	-	62707110	62707195	789624	3	214,131,194,	0,767,2541,
#Deleted in new
chr11	62707125	62709064	chr11:62707125-62709064	0	-	62707125	62707195	789624	2	199,354,	0,1585,
#Deleted in new
chr11	62707657	62709201	chr11:62707657-62709201	3	+	62708295	62708806	789624	3	258,100,524,	0,637,1020,
#Partially deleted in new
chr11	62712629	62727472	chr11:62712629-62727472	3	-	62715298	62727156	789624	14	2750,108,74,201,169,129,123,264,113,91,140,77,136,854,	0,2870,3234,4359,7393,8665,9190,9487,9971,10183,10957,11284,11661,13989,
#Partially deleted in new
chr11	62722863	62723985	chr11:62722863-62723985	0	-	62722863	62722863	8553170	2	40,399,	0,723,
#Partially deleted in new
chr11	62728068	62735564	chr11:62728068-62735564	0	+	62728848	62735564	789624	3	159,264,183,	0,754,7313,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	62728111	62736243	chr11:62728111-62736243	0	+	62728848	62733128	789624	4	625,264,82,862,	0,711,5006,7270,
#Partially deleted in new
chr11	62728538	62738636	chr11:62728538-62738636	3	+	62728848	62738382	789624	3	548,183,349,	0,6843,9749,
#Partially deleted in new
chr11	62728641	62738603	chr11:62728641-62738603	1	+	62728848	62738382	789624	4	95,264,183,316,	0,181,6740,9646,
#Partially deleted in new
chr11	62735449	62740284	chr11:62735449-62740284	0	+	62735449	62738382	789624	3	115,203,309,	0,2838,4526,
#Partially deleted in new
chr11	62739947	62740293	chr11:62739947-62740293	0	+	62739947	62739947	8553170	1	346,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	62748318	62752099	chr11:62748318-62752099	0	-	62752089	62752099	8553170	2	370,120,	0,3661,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	62750962	62754188	chr11:62750962-62754188	3	-	62752089	62754062	789624	2	2753,225,	0,3001,
#Deleted in new
chr11	62753317	62754159	chr11:62753317-62754159	0	-	62753317	62753664	789624	2	398,34,	0,808,
#Partially deleted in new
chr11	62761543	62766710	chr11:62761543-62766710	3	+	62761648	62766507	0	8	117,110,160,51,66,72,34,217,	0,251,1323,3638,3796,4109,4699,4950,
#Partially deleted in new
chr11	62761564	62765356	chr11:62761564-62765356	0	+	62765208	62765356	789624	5	50,110,160,51,17,	0,230,1302,3617,3775,
#Partially deleted in new
chr11	62761579	62766673	chr11:62761579-62766673	0	+	62761648	62762614	789624	8	81,110,325,51,66,72,34,180,	0,215,962,3602,3760,4073,4663,4914,
#Partially deleted in new
chr11	62761582	62766695	chr11:62761582-62766695	0	+	62761648	62761908	789624	8	78,390,160,51,66,72,34,202,	0,212,1284,3599,3757,4070,4660,4911,
#Partially deleted in new
chr11	62761616	62766710	chr11:62761616-62766710	0	+	62761648	62761908	789624	7	44,1072,51,66,72,34,217,	0,178,3565,3723,4036,4626,4877,
#Partially deleted in new
chr11	62761636	62766710	chr11:62761636-62766710	0	+	62761636	62761636	8553170	7	268,160,51,66,72,34,217,	0,1230,3545,3703,4016,4606,4857,
#Partially deleted in new
chr11	62761794	62765724	chr11:62761794-62765724	0	+	62761794	62762614	789624	6	110,201,160,51,66,72,	0,747,1072,3387,3545,3858,
#Partially deleted in new
chr11	62762753	62766707	chr11:62762753-62766707	0	+	62762753	62762753	8553170	6	273,51,66,72,34,214,	0,2428,2586,2899,3489,3740,
#Partially deleted in new
chr11	62771119	62771606	chr11:62771119-62771606	3	-	62771119	62771119	8553170	1	487,	0,
#Partially deleted in new
chr11	62771302	62787342	chr11:62771302-62787342	3	+	62775783	62787296	789624	11	188,160,87,151,51,95,75,221,133,129,826,	0,4468,5081,6675,6982,7566,10591,10810,11390,14957,15214,
#Partially deleted in new
chr11	62771356	62776387	chr11:62771356-62776387	0	+	62775783	62776387	789624	3	134,281,4,	0,4293,5027,
#Partially deleted in new
chr11	62771366	62778894	chr11:62771366-62778894	0	+	62775783	62776433	789624	6	124,160,82,151,51,26,	0,4404,5022,6611,6918,7502,
#Partially deleted in new
chr11	62771401	62782465	chr11:62771401-62782465	0	+	62771401	62771401	8553170	8	89,160,87,151,51,95,75,353,	0,4369,4982,6576,6883,7467,10492,10711,
#Partially deleted in new
chr11	62771402	62778788	chr11:62771402-62778788	0	+	62771402	62771402	8553170	5	88,160,87,151,504,	0,4368,4981,6575,6882,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	62771628	62791743	chr11:62771628-62791743	0	-	62771628	62771628	8553170	4	371,56,71,65,	0,448,2966,20050,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	62771660	62791992	chr11:62771660-62791992	0	-	62772105	62791992	789624	3	472,71,314,	0,2934,20018,
#Partially deleted in new
chr11	62772038	62778335	chr11:62772038-62778335	0	+	62775783	62778335	789624	5	79,160,87,151,51,	0,3732,4345,5939,6246,
#Partially deleted in new
chr11	62778686	62781941	chr11:62778686-62781941	0	+	62778686	62778686	8553170	2	277,48,	0,3207,
#Deleted in new
chr11	62781725	62782333	chr11:62781725-62782333	0	+	62781725	62781725	8553170	2	243,221,	0,387,
#Deleted in new
chr11	62786022	62786785	chr11:62786022-62786785	3	-	62786022	62786022	8553170	1	763,	0,
#Partially deleted in new
chr11	62787414	62790167	chr11:62787414-62790167	0	+	62787414	62787414	8553170	4	113,24,135,567,	0,1772,1877,2186,
#Partially deleted in new
chr11	62787414	62790246	chr11:62787414-62790246	1	+	62787431	62789901	789624	4	113,188,135,361,	0,1608,1877,2471,
#Partially deleted in new
chr11	62787426	62790405	chr11:62787426-62790405	3	+	62787431	62790047	789624	5	101,188,135,79,520,	0,1596,1865,2174,2459,
#Partially deleted in new
chr11	62787508	62791997	chr11:62787508-62791997	1	-	62787920	62791994	789624	2	417,319,	0,4170,
#Deleted in new
chr11	62789059	62790110	chr11:62789059-62790110	0	+	62789059	62789059	8553170	2	620,225,	0,826,
#Deleted in new
chr11	62789168	62789823	chr11:62789168-62789823	0	+	62789168	62789709	789624	3	42,135,223,	0,123,432,
#Deleted in new
chr11	62789814	62789885	chr11:62789814-62789885	3	+	62789814	62789814	5263520	1	71,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	62789970	62792021	chr11:62789970-62792021	3	-	62790622	62791994	789624	2	945,343,	0,1708,
#Partially deleted in new
chr11	62792122	62805470	chr11:62792122-62805470	1	-	62800321	62805356	0	20	392,61,183,73,43,116,59,108,56,69,1948,108,89,70,81,105,84,154,187,142,	0,518,2135,2812,3778,3943,4164,4337,5060,5195,6416,8971,9206,9439,9616,9819,10054,11296,11669,13206,
#Partially deleted in new
chr11	62792125	62805492	chr11:62792125-62805492	1	-	62792475	62805356	0	21	389,61,183,73,43,116,59,108,56,69,37,110,108,89,70,81,105,84,154,187,164,	0,515,2132,2809,3775,3940,4161,4334,5057,5192,6413,8251,8968,9203,9436,9613,9816,10051,11293,11666,13203,
#Partially deleted in new
chr11	62792170	62806302	chr11:62792170-62806302	3	-	62792475	62805356	0	22	344,61,183,73,43,116,59,108,56,69,37,110,108,89,70,81,105,84,154,187,546,112,	0,470,2087,2764,3730,3895,4116,4289,5012,5147,6368,8206,8923,9158,9391,9568,9771,10006,11248,11621,13158,14020,
#Partially deleted in new
chr11	62792230	62796082	chr11:62792230-62796082	0	-	62792475	62796082	789624	6	284,61,141,73,43,17,	0,410,2027,2704,3670,3835,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	62792352	62797058	chr11:62792352-62797058	0	-	62792352	62792352	8553170	9	162,61,183,73,43,116,59,108,117,	0,288,1905,2582,3548,3713,3934,4107,4589,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	62792414	62795400	chr11:62792414-62795400	0	-	62792414	62792414	8553170	3	287,183,466,	0,1843,2520,
#Partially deleted in new
chr11	62792417	62794628	chr11:62792417-62794628	0	-	62792417	62792417	8553170	3	97,61,371,	0,223,1840,
#Deleted in new
chr11	62792701	62792771	chr11:62792701-62792771	3	-	62792701	62792701	5263520	1	70,	0,
#Partially deleted in new
chr11	62794337	62805469	chr11:62794337-62805469	0	-	62794337	62805356	789624	20	103,73,43,116,59,108,56,69,37,110,108,89,70,81,105,84,154,187,129,141,	0,597,1563,1728,1949,2122,2845,2980,4201,6039,6756,6991,7224,7401,7604,7839,9081,9454,9744,10991,
#Partially deleted in new
chr11	62794750	62796563	chr11:62794750-62796563	0	-	62794750	62794750	8553170	5	257,43,116,59,104,	0,1150,1315,1536,1709,
#Partially deleted in new
chr11	62796148	62798606	chr11:62796148-62798606	0	-	62796148	62796148	8553170	6	33,56,108,56,69,68,	0,138,311,1034,1169,2390,
#Partially deleted in new
chr11	62796304	62805469	chr11:62796304-62805469	0	-	62796304	62796304	8553170	7	41,56,69,110,89,84,141,	0,878,1013,4072,5024,5872,9024,
#Partially deleted in new
chr11	62798844	62805440	chr11:62798844-62805440	0	-	62798844	62798844	8553170	3	412,45,112,	0,5089,6484,
#Partially deleted in new
chr11	62800112	62805440	chr11:62800112-62805440	1	-	62800321	62802218	789624	8	374,108,89,70,81,105,84,112,	0,981,1216,1449,1626,1829,2064,5216,
#Partially deleted in new
chr11	62801973	62805193	chr11:62801973-62805193	0	-	62801973	62803826	789624	5	73,84,154,187,91,	0,203,1445,1818,3129,
#Partially deleted in new
chr11	62802003	62805440	chr11:62802003-62805440	0	-	62803548	62805356	789624	5	43,84,154,179,112,	0,173,1415,1796,3325,
#Deleted in new
chr11	62803418	62804185	chr11:62803418-62804185	0	-	62803418	62803826	789624	2	154,394,	0,373,
#Deleted in new
chr11	62803549	62805471	chr11:62803549-62805471	0	-	62803549	62803549	8553170	2	429,143,	0,1779,
#Partially deleted in new
chr11	62806896	62832088	chr11:62806896-62832088	3	-	62807468	62831243	0	11	732,122,107,82,57,117,71,56,71,244,135,	0,17269,17562,18139,18386,18526,20258,20446,20664,24122,25057,
#Partially deleted in new
chr11	62806896	62832041	chr11:62806896-62832041	1	-	62807608	62831243	0	11	770,122,107,82,57,117,71,56,71,244,88,	0,17269,17562,18139,18386,18526,20258,20446,20664,24122,25057,
#Partially deleted in new
chr11	62806924	62832042	chr11:62806924-62832042	1	-	62807468	62831081	0	11	704,122,107,82,57,117,71,56,71,92,89,	0,17241,17534,18111,18358,18498,20230,20418,20636,24094,25029,
#Partially deleted in new
chr11	62806935	62832031	chr11:62806935-62832031	0	-	62827377	62831243	789624	10	693,122,107,82,57,117,71,56,244,78,	0,17230,17523,18100,18347,18487,20219,20407,24083,25018,
#Partially deleted in new
chr11	62806936	62832042	chr11:62806936-62832042	0	-	62824502	62831243	789624	11	692,122,107,93,57,117,71,56,71,244,89,	0,17229,17522,18088,18346,18486,20218,20406,20624,24082,25017,
#Deleted in new
chr11	62807681	62808063	chr11:62807681-62808063	3	-	62807681	62807681	8553170	1	382,	0,
#Partially deleted in new
chr11	62815965	62816067	chr11:62815965-62816067	3	-	62815965	62815965	8553170	1	102,	0,
#Partially deleted in new
chr11	62823914	62825526	chr11:62823914-62825526	0	-	62824161	62825526	789624	5	373,107,82,57,104,	0,544,1121,1368,1508,
#Partially deleted in new
chr11	62832233	62834043	chr11:62832233-62834043	3	+	62832233	62832233	789624	2	84,481,	0,1329,
#Deleted in new
chr11	62832318	62832803	chr11:62832318-62832803	3	-	62832375	62832750	789624	1	485,	0,
#Deleted in new
chr11	62832341	62833067	chr11:62832341-62833067	0	-	62832951	62833067	789624	2	237,134,	0,592,
#Partially deleted in new
chr11	62832910	62839581	chr11:62832910-62839581	1	-	62832951	62839570	789624	10	221,146,56,101,102,147,76,122,107,75,	0,881,1365,1516,2520,2784,3050,6203,6411,6596,
#Partially deleted in new
chr11	62832911	62839661	chr11:62832911-62839661	1	-	62832951	62839570	789624	11	220,57,146,56,101,102,147,76,122,107,155,	0,706,880,1364,1515,2519,2783,3049,6202,6410,6595,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	62832911	62841809	chr11:62832911-62841809	3	-	62832951	62839570	789624	12	220,57,146,56,101,102,147,76,122,107,361,241,	0,706,880,1364,1515,2519,2783,3049,6202,6410,6595,8657,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	62832911	62840156	chr11:62832911-62840156	1	-	62832951	62839570	789624	12	220,57,146,56,101,102,147,76,122,107,153,79,	0,706,880,1364,1515,2519,2783,3049,6202,6410,6595,7166,
#Partially deleted in new
chr11	62832934	62833919	chr11:62832934-62833919	0	+	62832934	62832934	8553170	2	200,357,	0,628,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	62832951	62840380	chr11:62832951-62840380	1	-	62832951	62839235	789624	12	180,57,146,56,101,102,147,76,122,107,327,303,	0,666,840,1324,1475,2479,2743,3009,6162,6370,6589,7126,
#Partially deleted in new
chr11	62832957	62834807	chr11:62832957-62834807	0	-	62832957	62832957	8553170	5	174,57,146,56,381,	0,660,834,1318,1469,
#Deleted in new
chr11	62833617	62834587	chr11:62833617-62834587	0	-	62833617	62833617	8553170	3	320,56,161,	0,658,809,
#Partially deleted in new
chr11	62833814	62839582	chr11:62833814-62839582	0	-	62839444	62839570	789624	8	123,56,101,102,147,76,122,261,	0,461,612,1616,1880,2146,5299,5507,
#Partially deleted in new
chr11	62834386	62839596	chr11:62834386-62839596	0	-	62834386	62834386	8553170	7	141,102,147,118,122,107,90,	0,1044,1308,1532,4727,4935,5120,
#Partially deleted in new
chr11	62834896	62839577	chr11:62834896-62839577	0	-	62834896	62834896	8553170	7	359,102,147,76,122,107,71,	0,534,798,1064,4217,4425,4610,
#Deleted in new
chr11	62835239	62836007	chr11:62835239-62836007	0	-	62835239	62835239	8553170	3	293,147,47,	0,455,721,
#Partially deleted in new
chr11	62835488	62839558	chr11:62835488-62839558	0	-	62835488	62835488	8553170	4	353,76,122,237,	0,472,3625,3833,
#Partially deleted in new
chr11	62835604	62839581	chr11:62835604-62839581	0	-	62835604	62835604	8553170	5	237,76,122,107,75,	0,356,3509,3717,3902,
#Deleted in new
chr11	62835761	62836676	chr11:62835761-62836676	0	-	62835761	62835761	8553170	2	80,716,	0,199,
#Partially deleted in new
chr11	62835778	62839584	chr11:62835778-62839584	0	-	62835778	62835778	8553170	4	258,122,107,78,	0,3335,3543,3728,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	62839321	62841809	chr11:62839321-62841809	0	-	62839321	62839570	789624	3	107,200,241,	0,185,2247,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	62841618	62841809	chr11:62841618-62841809	3	-	62841618	62841618	8553170	1	191,	0,
#Partially deleted in new
chr11	62851987	62855881	chr11:62851987-62855881	3	-	62851987	62851987	8553170	9	288,45,39,33,47,33,84,43,17,	0,1083,1564,1813,2030,2531,3145,3436,3877,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	62851987	62855867	chr11:62851987-62855867	1	-	62851987	62851987	789624	10	694,29,41,39,33,47,33,51,76,444,	0,823,1087,1564,1813,2030,2531,2900,3145,3436,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	62851987	62855236	chr11:62851987-62855236	1	-	62851987	62851987	8553170	9	694,29,41,39,33,47,33,51,104,	0,823,1087,1564,1813,2030,2531,2900,3145,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	62851987	62855746	chr11:62851987-62855746	1	-	62851987	62851987	8553170	10	694,29,41,39,33,47,33,51,84,323,	0,823,1087,1564,1813,2030,2531,2900,3145,3436,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	62851988	62855885	chr11:62851988-62855885	0	-	62851988	62851988	8553170	5	693,780,264,33,998,	0,822,1812,2530,2899,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	62851990	62855460	chr11:62851990-62855460	1	-	62851990	62851990	789624	9	691,29,41,39,33,33,51,84,37,	0,820,1084,1561,1810,2528,2897,3142,3433,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	62852019	62855236	chr11:62852019-62855236	1	-	62852019	62852019	8553170	7	662,29,41,39,33,47,104,	0,791,1055,1532,1781,1998,3113,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	62852047	62853696	chr11:62852047-62853696	0	-	62852047	62852047	8553170	4	634,29,41,145,	0,763,1027,1504,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	62852251	62855488	chr11:62852251-62855488	1	-	62852251	62852251	8553170	8	430,29,41,39,33,33,84,65,	0,559,823,1300,1549,2267,2881,3172,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	62852257	62855914	chr11:62852257-62855914	1	-	62852257	62852257	8553170	9	424,29,41,39,33,47,33,84,50,	0,553,817,1294,1543,1760,2261,2875,3607,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	62852289	62855488	chr11:62852289-62855488	1	-	62852289	62852289	8553170	9	377,29,41,39,33,47,33,84,65,	0,521,785,1262,1511,1728,2229,2843,3134,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	62852296	62855488	chr11:62852296-62855488	1	-	62852296	62852296	8553170	11	140,26,29,41,39,33,47,33,51,84,65,	0,359,514,778,1255,1504,1721,2222,2591,2836,3127,
#Deleted in new
chr11	62852608	62855467	chr11:62852608-62855467	1	-	62852608	62852608	8553170	7	73,41,39,33,33,84,44,	0,466,943,1192,1910,2524,2815,
#Deleted in new
chr11	62852748	62855460	chr11:62852748-62855460	0	-	62852748	62852748	8553170	9	245,41,39,33,47,33,51,84,37,	0,326,803,1052,1269,1770,2139,2384,2675,
#Deleted in new
chr11	62852831	62855488	chr11:62852831-62855488	0	-	62852831	62852831	8553170	8	284,39,33,47,33,51,84,65,	0,720,969,1186,1687,2056,2301,2592,
#Deleted in new
chr11	62852909	62853035	chr11:62852909-62853035	3	-	62852909	62852909	789624	1	126,	0,
#Deleted in new
chr11	62853071	62854342	chr11:62853071-62854342	0	-	62853071	62853071	8553170	3	44,39,542,	0,480,729,
#Deleted in new
chr11	62853072	62855488	chr11:62853072-62855488	0	-	62853072	62853072	8553170	6	518,33,33,51,84,65,	0,728,1446,1815,2060,2351,
#Deleted in new
chr11	62853353	62855488	chr11:62853353-62855488	0	-	62853353	62853353	8553170	7	237,33,47,33,51,84,65,	0,447,664,1165,1534,1779,2070,
#Deleted in new
chr11	62853546	62855479	chr11:62853546-62855479	0	-	62853546	62853546	8553170	6	44,264,33,51,84,56,	0,254,972,1341,1586,1877,
#Deleted in new
chr11	62853572	62855174	chr11:62853572-62855174	1	-	62853572	62853572	8553170	6	18,49,47,33,51,42,	0,228,445,946,1315,1560,
#Deleted in new
chr11	62853662	62853732	chr11:62853662-62853732	3	-	62853662	62853662	789624	1	70,	0,
#Deleted in new
chr11	62854079	62855812	chr11:62854079-62855812	0	-	62854079	62854079	8553170	4	472,51,84,389,	0,808,1053,1344,
#Deleted in new
chr11	62854160	62854285	chr11:62854160-62854285	3	-	62854160	62854160	8553170	1	125,	0,
#Deleted in new
chr11	62854367	62855488	chr11:62854367-62855488	0	-	62854367	62854367	8553170	3	184,329,65,	0,520,1056,
#Deleted in new
chr11	62854441	62855488	chr11:62854441-62855488	0	-	62854441	62854441	8553170	3	497,84,65,	0,691,982,
#Deleted in new
chr11	62854620	62854695	chr11:62854620-62854695	3	-	62854620	62854620	789624	1	75,	0,
#Deleted in new
chr11	62854679	62855488	chr11:62854679-62855488	0	-	62854679	62854679	8553170	2	529,65,	0,744,
#Deleted in new
chr11	62854681	62855758	chr11:62854681-62855758	0	-	62854681	62854681	8553170	2	535,335,	0,742,
#Deleted in new
chr11	62855011	62855083	chr11:62855011-62855083	3	-	62855011	62855011	789624	1	72,	0,
#Deleted in new
chr11	62855291	62855366	chr11:62855291-62855366	3	-	62855291	62855291	789624	1	75,	0,
#Deleted in new
chr11	62855563	62855632	chr11:62855563-62855632	3	-	62855563	62855563	789624	1	69,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	62856101	62888793	chr11:62856101-62888793	1	+	62856269	62888693	0	12	280,93,93,429,174,92,69,59,181,144,84,463,	0,14643,15475,24917,25791,26806,28355,28530,29075,29363,32033,32229,
#Partially deleted in new
chr11	62856143	62888853	chr11:62856143-62888853	3	+	62856269	62888693	0	10	238,429,174,92,69,59,181,144,84,523,	0,24875,25749,26764,28313,28488,29033,29321,31991,32187,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	62856167	62888875	chr11:62856167-62888875	1	+	62856269	62888693	789624	11	214,93,429,174,92,69,59,181,144,84,545,	0,15409,24851,25725,26740,28289,28464,29009,29297,31967,32163,
#Deleted in new
chr11	62880421	62881428	chr11:62880421-62881428	0	+	62881023	62881428	789624	2	179,410,	0,597,
#Partially deleted in new
chr11	62880871	62888855	chr11:62880871-62888855	1	+	62881023	62888693	0	9	576,174,92,69,59,181,144,84,525,	0,1021,2036,3585,3760,4305,4593,7263,7459,
#Deleted in new
chr11	62880895	62882037	chr11:62880895-62882037	0	+	62881023	62882037	789624	2	420,145,	0,997,
#Deleted in new
chr11	62880895	62881290	chr11:62880895-62881290	0	+	62881023	62881290	789624	2	161,108,	0,287,
#Partially deleted in new
chr11	62881667	62885314	chr11:62881667-62885314	0	+	62881667	62881667	8553170	6	51,174,92,69,59,138,	0,225,1240,2789,2964,3509,
#Deleted in new
chr11	62881697	62882386	chr11:62881697-62882386	0	+	62881697	62881697	8553170	2	21,494,	0,195,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	62881698	62888368	chr11:62881698-62888368	0	+	62885527	62888368	789624	10	368,141,92,124,69,59,181,144,84,38,	0,968,1209,2290,2758,2933,3478,3766,6436,6632,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	62881708	62888455	chr11:62881708-62888455	0	+	62881708	62881708	8553170	10	358,92,124,69,59,181,144,132,84,125,	0,1199,2280,2748,2923,3468,3756,4728,6426,6622,
#Partially deleted in new
chr11	62881724	62888845	chr11:62881724-62888845	1	+	62885527	62888693	789624	8	342,92,69,59,181,144,84,515,	0,1183,2732,2907,3452,3740,6410,6606,
#Partially deleted in new
chr11	62882774	62885387	chr11:62882774-62885387	0	+	62882774	62882774	8553170	4	225,69,59,211,	0,1682,1857,2402,
#Partially deleted in new
chr11	62882960	62885587	chr11:62882960-62885587	0	+	62882960	62884024	789624	6	39,124,69,59,181,123,	0,1028,1496,1671,2216,2504,
#Partially deleted in new
chr11	62883347	62888858	chr11:62883347-62888858	0	+	62883347	62883347	8553170	6	1178,59,181,144,84,528,	0,1284,1829,2117,4787,4983,
#Partially deleted in new
chr11	62884454	62888169	chr11:62884454-62888169	0	+	62884454	62884454	8553170	4	71,59,432,35,	0,177,722,3680,
#Partially deleted in new
chr11	62885176	62888860	chr11:62885176-62888860	0	+	62885176	62888693	789624	3	181,144,209,	0,288,3475,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	62887869	62888520	chr11:62887869-62888520	0	+	62887869	62887869	8553170	2	349,190,	0,461,
#Partially deleted in new
chr11	62908678	62921681	chr11:62908678-62921681	3	-	62909717	62911100	0	2	2500,464,	0,12539,
#Partially deleted in new
chr11	62909545	62918361	chr11:62909545-62918361	3	+	62909545	62909545	8553170	3	70,243,436,	0,1057,8380,
#Partially deleted in new
chr11	62909737	62921807	chr11:62909737-62921807	0	-	62909737	62911100	0	3	1441,92,590,	0,10935,11480,
#Partially deleted in new
chr11	62910697	62916941	chr11:62910697-62916941	0	-	62910697	62911100	789624	2	481,68,	0,6176,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	62935981	62936234	chr11:62935981-62936234	3	-	62935981	62935981	8553170	1	253,	0,
#Partially deleted in new
chr11	62936384	62984824	chr11:62936384-62984824	0	-	62981371	62984690	789624	10	102,204,109,215,116,124,169,155,81,503,	0,40799,43103,43349,44600,44875,45457,47152,47559,47937,
#Partially deleted in new
chr11	62936426	62959852	chr11:62936426-62959852	7	-	62936426	62936426	16724991	6	57,212,162,66,124,375,	0,347,9822,12446,12664,23051,
#Partially deleted in new
chr11	62976596	62984983	chr11:62976596-62984983	3	-	62976793	62984690	789624	10	285,204,109,215,116,124,169,155,104,662,	0,587,2891,3137,4388,4663,5245,6940,7347,7725,
#Partially deleted in new
chr11	62976601	62984957	chr11:62976601-62984957	1	-	62976793	62984690	789624	10	280,243,109,215,116,124,169,155,104,636,	0,543,2886,3132,4383,4658,5240,6935,7342,7720,
#Partially deleted in new
chr11	62976793	62984690	chr11:62976793-62984690	1	-	62976793	62984690	789624	10	88,111,109,215,116,124,169,155,104,369,	0,351,2694,2940,4191,4466,5048,6743,7150,7528,
#Partially deleted in new
chr11	62976793	62984690	chr11:62976793-62984690	1	-	62976793	62984690	789624	10	88,72,109,215,116,124,169,155,104,369,	0,390,2694,2940,4191,4466,5048,6743,7150,7528,
#Partially deleted in new
chr11	62979867	62983892	chr11:62979867-62983892	0	-	62979867	62979867	8553170	6	81,116,124,169,155,123,	0,1117,1392,1974,3669,3902,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	62989153	62999499	chr11:62989153-62999499	0	-	62989153	62989153	8553170	2	6999,579,	0,9767,
#Partially deleted in new
chr11	62992823	63015839	chr11:62992823-63015839	3	-	62993236	63014958	789624	11	513,204,109,215,116,124,169,155,104,358,111,	0,600,946,1718,2880,3205,6097,6864,7896,21802,22905,
#Deleted in new
chr11	62992824	62995457	chr11:62992824-62995457	0	-	62992824	62992824	8553170	2	803,1688,	0,945,
#Partially deleted in new
chr11	62993082	63015815	chr11:62993082-63015815	1	-	62993236	63014685	789624	11	254,204,109,215,116,124,169,155,104,85,87,	0,341,687,1459,2621,2946,5838,6605,7637,21543,22646,
#Partially deleted in new
chr11	62993227	63015810	chr11:62993227-63015810	1	-	62993236	63000787	789624	10	109,204,109,215,116,124,169,155,104,82,	0,196,542,1314,2476,2801,5693,6460,7492,22501,
#Partially deleted in new
chr11	62993236	63014958	chr11:62993236-63014958	1	-	62993350	63014958	789624	9	391,109,215,116,124,169,155,104,333,	0,533,1305,2467,2792,5684,6451,7483,21389,
#Partially deleted in new
chr11	62993236	63015839	chr11:62993236-63015839	1	-	62993236	63014958	789624	11	100,204,109,215,116,124,169,155,104,337,111,	0,187,533,1305,2467,2792,5684,6451,7483,21389,22492,
#Partially deleted in new
chr11	62996091	63000995	chr11:62996091-63000995	0	-	62996091	62996091	8553170	5	61,169,155,104,54,	0,2829,3596,4628,4850,
#Partially deleted in new
chr11	62996105	63000996	chr11:62996105-63000996	0	-	62996105	62996105	8553170	4	47,169,155,277,	0,2815,3582,4614,
#Deleted in new
chr11	63014573	63015839	chr11:63014573-63015839	0	-	63014573	63014573	8553170	2	410,111,	0,1155,
#Partially deleted in new
chr11	63032502	63033103	chr11:63032502-63033103	7	-	63032502	63032502	16724991	1	601,	0,
#Deleted in new
chr11	63046784	63048126	chr11:63046784-63048126	7	+	63046784	63046784	16724991	1	1342,	0,
#Partially deleted in new
chr11	63079939	63144221	chr11:63079939-63144221	1	-	63079939	63143779	789624	10	58,204,109,215,116,124,169,155,104,844,	0,980,1618,3303,16051,24235,38972,39241,54725,63438,
#Partially deleted in new
chr11	63079939	63144221	chr11:63079939-63144221	3	-	63079939	63143779	789624	10	61,204,109,215,116,124,169,155,104,844,	0,980,1618,3303,16051,24235,38972,39241,54725,63438,
#Partially deleted in new
chr11	63115879	63116338	chr11:63115879-63116338	7	-	63115879	63115879	16724991	1	459,	0,
#Partially deleted in new
chr11	63118520	63144221	chr11:63118520-63144221	1	-	63118772	63143779	789624	4	560,155,104,844,	0,660,16144,24857,
#Partially deleted in new
chr11	63163775	63229652	chr11:63163775-63229652	3	-	63163823	63229652	789624	9	298,109,215,116,124,169,155,104,402,	0,750,2268,16884,19918,53538,53805,64685,65475,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	63163826	63229650	chr11:63163826-63229650	0	-	63219918	63229650	789624	11	247,109,2017,116,124,169,155,145,113,104,400,	0,699,2217,16833,19867,53487,53754,54254,56082,64634,65424,
#Partially deleted in new
chr11	63237956	63239114	chr11:63237956-63239114	7	-	63237956	63237956	16724991	2	55,393,	0,765,
#Partially deleted in new
chr11	63243084	63244004	chr11:63243084-63244004	7	+	63243084	63243084	16724991	2	165,634,	0,286,
#Deleted in new
chr11	63265835	63266256	chr11:63265835-63266256	7	-	63265835	63265835	16724991	1	421,	0,
#Partially deleted in new
chr11	63289899	63311771	chr11:63289899-63311771	0	+	63290321	63304705	789624	11	122,290,104,155,169,124,116,76,109,204,765,	0,378,1640,7403,7659,9020,9614,12429,14208,14786,21107,
#Partially deleted in new
chr11	63290091	63291622	chr11:63290091-63291622	0	+	63290091	63290091	8553170	2	476,83,	0,1448,
#Partially deleted in new
chr11	63290163	63311432	chr11:63290163-63311432	3	+	63290165	63311034	789624	10	404,104,155,169,124,116,215,109,204,426,	0,1376,7139,7395,8756,9350,12165,13944,14522,20843,
#Partially deleted in new
chr11	63290298	63304751	chr11:63290298-63304751	0	+	63290321	63304705	789624	7	269,104,124,116,76,109,66,	0,1241,8621,9215,12030,13809,14387,
#Partially deleted in new
chr11	63290307	63311101	chr11:63290307-63311101	1	+	63290321	63311034	789624	5	260,104,124,116,95,	0,1232,8612,9206,20699,
#Partially deleted in new
chr11	63369788	63409958	chr11:63369788-63409958	0	+	63370056	63375686	789624	7	670,104,169,124,119,215,157,	0,1346,4105,5856,12370,36708,40013,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	63369807	63410294	chr11:63369807-63410294	3	+	63370056	63409862	789624	10	651,104,155,169,124,119,215,109,204,493,	0,1327,3836,4086,5837,12351,36689,38304,38868,39994,
#Partially deleted in new
chr11	63461403	63490939	chr11:63461403-63490939	0	-	63466368	63490939	789624	4	2192,263,91,53,	0,4706,28839,29483,
#Partially deleted in new
chr11	63461413	63491167	chr11:63461413-63491167	1	-	63463502	63491034	789624	6	2182,263,109,106,91,281,	0,4696,6943,27457,28829,29473,
#Partially deleted in new
chr11	63463259	63491168	chr11:63463259-63491168	1	-	63463530	63491034	789624	6	336,213,109,106,121,282,	0,2900,5097,25611,26983,27627,
#Partially deleted in new
chr11	63463336	63491194	chr11:63463336-63491194	3	-	63463502	63491034	789624	6	259,263,109,106,121,308,	0,2773,5020,25534,26906,27550,
#Partially deleted in new
chr11	63463475	63490965	chr11:63463475-63490965	0	-	63468430	63490965	789624	4	120,263,109,79,	0,2634,4881,27411,
#Partially deleted in new
chr11	63466145	63490532	chr11:63466145-63490532	0	-	63466145	63466202	789624	4	227,109,106,290,	0,2211,22725,24097,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	63469375	63470944	chr11:63469375-63470944	7	+	63469375	63469375	16724991	2	408,844,	0,725,
#Partially deleted in new
chr11	63506083	63516767	chr11:63506083-63516767	1	+	63506392	63516393	789624	8	444,89,214,120,39,89,151,521,	0,2469,2694,3694,4379,5668,9479,10163,
#Partially deleted in new
chr11	63506101	63516709	chr11:63506101-63516709	3	+	63506392	63516393	789624	9	426,89,214,120,39,27,89,151,463,	0,2451,2676,3676,4361,4977,5650,9461,10145,
#Partially deleted in new
chr11	63506362	63516774	chr11:63506362-63516774	1	+	63506392	63516393	789624	9	165,89,217,120,39,27,89,151,528,	0,2190,2412,3415,4100,4716,5389,9200,9884,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	63507986	63516767	chr11:63507986-63516767	1	+	63508600	63516393	789624	8	655,214,120,39,27,89,151,521,	0,791,1791,2476,3092,3765,7576,8260,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	63507986	63516767	chr11:63507986-63516767	1	+	63508600	63516393	789624	7	655,214,120,39,89,151,521,	0,791,1791,2476,3765,7576,8260,
#Partially deleted in new
chr11	63536808	63546462	chr11:63536808-63546462	0	+	63536808	63536808	8553170	3	69,269,314,	0,7812,9340,
#Partially deleted in new
chr11	63536815	63545387	chr11:63536815-63545387	1	+	63536868	63544973	0	3	62,109,767,	0,2700,7805,
#Partially deleted in new
chr11	63536820	63546462	chr11:63536820-63546462	3	+	63536868	63546256	0	4	57,109,269,314,	0,2695,7800,9328,
#Partially deleted in new
chr11	63536844	63546325	chr11:63536844-63546325	0	+	63536844	63536844	8553170	3	33,290,177,	0,7755,9304,
#Partially deleted in new
chr11	63538395	63546457	chr11:63538395-63546457	1	+	63538395	63546256	789624	4	19,99,269,309,	0,1130,6225,7753,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	63552769	63563383	chr11:63552769-63563383	3	-	63552963	63563324	0	4	296,269,109,68,	0,5622,7315,10546,
#Partially deleted in new
chr11	63573194	63614369	chr11:63573194-63614369	3	-	63574944	63614014	0	4	1852,269,103,370,	0,16905,24866,40805,
#Partially deleted in new
chr11	63574473	63614469	chr11:63574473-63614469	1	-	63574944	63614014	0	5	573,269,103,69,85,	0,15626,23587,39526,39911,
#Partially deleted in new
chr11	63574473	63598715	chr11:63574473-63598715	1	-	63574944	63598715	789624	4	573,269,103,12,	0,15626,23587,24230,
#Partially deleted in new
chr11	63574849	63614158	chr11:63574849-63614158	0	-	63574849	63574849	8553170	4	197,269,53,159,	0,15250,23211,39150,
#Partially deleted in new
chr11	63590253	63608581	chr11:63590253-63608581	0	-	63590253	63590336	789624	2	115,128,	0,18200,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	63590338	63616883	chr11:63590338-63616883	0	-	63590338	63590338	8553170	3	30,103,297,	0,7722,26248,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	63616307	63621671	chr11:63616307-63621671	3	+	63616307	63616307	8553170	2	105,468,	0,4896,
#Duplicated in new
chr11	63624086	63671612	chr11:63624086-63671612	3	-	63629318	63671335	0	13	5319,432,72,57,128,139,93,57,51,105,144,215,323,	0,6953,8939,11447,12120,19270,20082,22420,27849,28384,34674,34951,47203,
#Partially deleted in new
chr11	63629252	63671909	chr11:63629252-63671909	1	-	63629318	63659244	789624	13	153,432,72,57,128,139,93,57,51,105,144,215,274,	0,1787,3773,6281,6954,14104,14916,17254,22683,23218,29508,29785,42383,
#Deleted in new
chr11	63632232	63632720	chr11:63632232-63632720	7	+	63632232	63632232	16724991	1	488,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	63637676	63658962	chr11:63637676-63658962	3	+	63637676	63637676	8553170	3	59,188,176,	0,12883,21110,
#Partially deleted in new
chr11	63658813	63671921	chr11:63658813-63671921	0	-	63658813	63671715	789624	4	91,215,122,286,	0,224,12476,12822,
#Partially deleted in new
chr11	63659037	63671746	chr11:63659037-63671746	0	-	63659037	63659037	8553170	3	215,156,457,	0,11319,12252,
#Partially deleted in new
chr11	63681445	63759882	chr11:63681445-63759882	1	+	63681636	63758275	789624	6	333,208,139,70,47,1727,	0,68545,71061,71623,72216,76710,
#Partially deleted in new
chr11	63681449	63759891	chr11:63681449-63759891	1	+	63681636	63758201	789624	8	329,57,208,139,70,47,59,1736,	0,23401,68541,71057,71619,72212,74662,76706,
#Partially deleted in new
chr11	63681457	63752634	chr11:63681457-63752634	0	+	63681636	63752634	789624	4	321,78,208,128,	0,65489,68533,71049,
#Partially deleted in new
chr11	63681473	63714479	chr11:63681473-63714479	0	+	63681473	63681473	8553170	2	305,509,	0,32497,
#Partially deleted in new
chr11	63681482	63759891	chr11:63681482-63759891	3	+	63681636	63758201	789624	8	296,2331,208,139,70,47,59,1736,	0,37219,68508,71024,71586,72179,74629,76673,
#Partially deleted in new
chr11	63681482	63759885	chr11:63681482-63759885	1	+	63681636	63758201	789624	9	296,57,2331,208,139,70,47,59,1730,	0,23368,37219,68508,71024,71586,72179,74629,76673,
#Partially deleted in new
chr11	63681495	63758421	chr11:63681495-63758421	1	+	63681636	63758201	789624	8	283,2052,208,139,70,47,59,266,	0,37485,68495,71011,71573,72166,74616,76660,
#Partially deleted in new
chr11	63681499	63758543	chr11:63681499-63758543	0	+	63681636	63753090	789624	5	279,208,70,47,388,	0,68491,71569,72162,76656,
#Partially deleted in new
chr11	63681499	63759885	chr11:63681499-63759885	1	+	63681636	63758201	789624	7	279,208,139,70,47,59,1730,	0,68491,71007,71569,72162,74612,76656,
#Partially deleted in new
chr11	63681499	63750423	chr11:63681499-63750423	0	+	63681499	63681499	8553170	2	279,433,	0,68491,
#Partially deleted in new
chr11	63681499	63719197	chr11:63681499-63719197	0	+	63681636	63719197	789624	2	279,250,	0,37448,
#Partially deleted in new
chr11	63681499	63719189	chr11:63681499-63719189	0	+	63681636	63719189	789624	3	279,57,209,	0,23351,37481,
#Partially deleted in new
chr11	63681538	63714166	chr11:63681538-63714166	0	+	63681538	63681538	8553170	3	240,57,196,	0,23312,32432,
#Partially deleted in new
chr11	63681572	63759089	chr11:63681572-63759089	1	+	63681636	63758391	789624	4	206,208,59,934,	0,68418,74539,76583,
#Deleted in new
chr11	63698595	63698764	chr11:63698595-63698764	7	-	63698595	63698595	16724991	1	169,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	63759891	63768775	chr11:63759891-63768775	3	-	63763417	63768622	789624	5	3978,561,387,498,292,	0,4146,4976,5915,8592,
#Deleted in new
chr11	63763302	63765962	chr11:63763302-63765962	0	-	63763417	63765962	789624	2	567,156,	0,2504,
#Deleted in new
chr11	63764181	63765952	chr11:63764181-63765952	0	-	63764181	63765952	789624	4	417,52,212,146,	0,686,861,1625,
#Deleted in new
chr11	63767322	63768641	chr11:63767322-63768641	1	-	63767549	63768622	789624	2	232,158,	0,1161,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	63797783	63798071	chr11:63797783-63798071	3	-	63797783	63797783	8553170	1	288,	0,
#Partially deleted in new
chr11	63813387	63827718	chr11:63813387-63827718	3	+	63813686	63827139	789624	6	426,330,150,126,201,791,	0,4417,4828,5139,5414,13540,
#Partially deleted in new
chr11	63818594	63823371	chr11:63818594-63823371	0	+	63818594	63823156	789624	4	58,201,58,237,	0,207,4196,4540,
#Partially deleted in new
chr11	63818946	63823261	chr11:63818946-63823261	0	+	63818946	63822620	789624	2	56,673,	0,3642,
#Deleted in new
chr11	63834666	63834943	chr11:63834666-63834943	7	-	63834666	63834666	16724991	1	277,	0,
#Partially deleted in new
chr11	63838927	63911019	chr11:63838927-63911019	3	+	63895203	63909237	789624	18	633,180,54,49,66,71,57,237,120,100,113,133,179,72,50,258,45,2143,	0,56231,56652,59304,59680,59835,60124,60946,61631,61852,62029,63270,63676,64133,65170,65858,69332,69949,
#Partially deleted in new
chr11	63838927	63911019	chr11:63838927-63911019	1	+	63839506	63909237	0	19	633,180,54,49,66,71,57,237,120,100,113,133,182,98,162,258,27,45,2143,	0,56231,56652,59304,59680,59835,60124,60946,61631,61852,62029,63270,63673,64133,65058,65858,67160,69332,69949,
#Partially deleted in new
chr11	63839004	63909579	chr11:63839004-63909579	1	+	63839506	63909237	0	17	556,180,54,49,66,71,57,237,120,100,113,133,182,98,258,27,703,	0,56154,56575,59227,59603,59758,60047,60869,61554,61775,61952,63193,63596,64056,65781,67083,69872,
#Partially deleted in new
chr11	63839004	63909484	chr11:63839004-63909484	1	+	63839506	63909237	0	17	556,180,54,49,66,71,57,237,120,100,113,133,179,98,258,45,608,	0,56154,56575,59227,59603,59758,60047,60869,61554,61775,61952,63193,63599,64056,65781,69255,69872,
#Partially deleted in new
chr11	63839092	63909596	chr11:63839092-63909596	1	+	63839506	63909237	0	16	468,180,54,49,66,71,57,237,120,100,113,133,179,98,258,720,	0,56066,56487,59139,59515,59670,59959,60781,61466,61687,61864,63105,63511,63968,65693,69784,
#Partially deleted in new
chr11	63839294	63909573	chr11:63839294-63909573	1	+	63839506	63909237	789624	18	266,180,54,49,66,71,57,237,120,100,113,133,179,98,162,258,45,697,	0,55864,56285,58937,59313,59468,59757,60579,61264,61485,61662,62903,63309,63766,64691,65491,68965,69582,
#Partially deleted in new
chr11	63849962	63899924	chr11:63849962-63899924	0	+	63895203	63899924	789624	8	67,180,54,49,66,71,57,51,	0,45196,45617,48269,48645,48800,49089,49911,
#Partially deleted in new
chr11	63868469	63895275	chr11:63868469-63895275	0	+	63868753	63895275	789624	2	440,117,	0,26689,
#Partially deleted in new
chr11	63869275	63898793	chr11:63869275-63898793	0	+	63895203	63898793	789624	7	97,81,180,54,49,66,31,	0,10872,25883,26304,28956,29332,29487,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	63882586	63882685	chr11:63882586-63882685	3	-	63882586	63882586	8553170	1	99,	0,
#Partially deleted in new
chr11	63888546	63909398	chr11:63888546-63909398	1	+	63895203	63909237	0	18	418,180,54,49,66,71,57,237,120,100,113,133,179,98,162,258,45,522,	0,6612,7033,9685,10061,10216,10505,11327,12012,12233,12410,13651,14057,14514,15439,16239,19713,20330,
#Partially deleted in new
chr11	63888695	63895226	chr11:63888695-63895226	0	+	63888924	63895226	789624	3	269,74,68,	0,1526,6463,
#Partially deleted in new
chr11	63895154	63909591	chr11:63895154-63909591	1	+	63895203	63909237	0	18	184,54,49,66,71,57,237,120,100,113,133,182,98,162,258,27,45,715,	0,425,3077,3453,3608,3897,4719,5404,5625,5802,7043,7446,7906,8831,9631,10933,13105,13722,
#Partially deleted in new
chr11	63895185	63909255	chr11:63895185-63909255	1	+	63895203	63909237	0	16	153,54,49,66,71,57,237,120,100,113,133,179,98,258,45,379,	0,394,3046,3422,3577,3866,4688,5373,5594,5771,7012,7418,7875,9600,13074,13691,
#Partially deleted in new
chr11	63895203	63909237	chr11:63895203-63909237	1	+	63895203	63909237	789624	17	135,54,49,66,71,57,237,120,100,113,133,179,72,50,258,45,361,	0,376,3028,3404,3559,3848,4670,5355,5576,5753,6994,7400,7857,8894,9582,13056,13673,
#Deleted in new
chr11	63902686	63903403	chr11:63902686-63903403	0	+	63902686	63902686	8553170	2	96,343,	0,374,
#Partially deleted in new
chr11	63911220	63916844	chr11:63911220-63916844	3	-	63911864	63916456	789624	12	959,230,58,78,216,70,125,162,53,81,57,515,	0,1084,1455,1649,2733,3040,3196,3434,3681,3957,4334,5109,
#Deleted in new
chr11	63911887	63912956	chr11:63911887-63912956	0	-	63911887	63911887	8553170	3	647,58,87,	0,788,982,
#Deleted in new
chr11	63911954	63912307	chr11:63911954-63912307	0	-	63911954	63911954	8553170	2	225,51,	0,302,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	63938958	63957319	chr11:63938958-63957319	0	+	63938958	63938958	8553170	7	144,1164,96,159,84,78,2982,	0,6881,13279,13448,13797,15013,15379,
#Partially deleted in new
chr11	63938993	63952619	chr11:63938993-63952619	0	+	63938993	63938993	8553170	5	109,96,53,96,213,	0,6846,7957,13244,13413,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	63938995	63957328	chr11:63938995-63957328	3	+	63939096	63954479	0	8	107,96,53,96,159,84,78,2991,	0,6844,7955,13242,13411,13760,14976,15342,
#Partially deleted in new
chr11	63938995	63954675	chr11:63938995-63954675	0	+	63939096	63952255	789624	7	107,96,96,159,84,78,338,	0,6844,13242,13411,13760,14976,15342,
#Partially deleted in new
chr11	63939001	63954586	chr11:63939001-63954586	1	+	63939096	63954479	789624	5	101,96,53,78,249,	0,6838,7949,14970,15336,
#Partially deleted in new
chr11	63939001	63954591	chr11:63939001-63954591	0	+	63939096	63946832	789624	5	101,96,279,78,254,	0,6838,7723,14970,15336,
#Partially deleted in new
chr11	63939247	63954519	chr11:63939247-63954519	1	+	63945896	63954479	0	8	287,96,53,96,159,84,78,182,	0,6592,7703,12990,13159,13508,14724,15090,
#Deleted in new
chr11	63952147	63952571	chr11:63952147-63952571	0	+	63952147	63952147	8553170	2	186,165,	0,259,
#Partially deleted in new
chr11	63952368	63954717	chr11:63952368-63954717	0	+	63952368	63952368	8553170	3	471,78,380,	0,1603,1969,
#Partially deleted in new
chr11	63952402	63954474	chr11:63952402-63954474	0	+	63952402	63952402	8553170	4	163,181,78,137,	0,256,1569,1935,
#Partially deleted in new
chr11	63974606	63976543	chr11:63974606-63976543	3	+	63974680	63976320	789624	2	188,319,	0,1618,
#Partially deleted in new
chr11	63974619	63988346	chr11:63974619-63988346	3	+	63974680	63988343	789624	3	175,374,10,	0,11521,13717,
#Partially deleted in new
chr11	63985852	63998411	chr11:63985852-63998411	0	+	63985852	63985852	789624	6	662,62,99,412,195,1063,	0,2484,2801,10677,11197,11496,
#Partially deleted in new
chr11	63985852	63998420	chr11:63985852-63998420	1	+	63986456	63997546	789624	7	662,62,99,119,88,195,1072,	0,2484,2801,10677,11001,11197,11496,
#Partially deleted in new
chr11	63985996	63998376	chr11:63985996-63998376	1	+	63986456	63997546	789624	4	518,62,195,1028,	0,2340,11053,11352,
#Partially deleted in new
chr11	63986004	64001811	chr11:63986004-64001811	1	+	63986456	64001733	789624	10	510,62,99,119,85,195,78,82,65,96,	0,2332,2649,10525,10852,11045,11344,11682,15451,15711,
#Partially deleted in new
chr11	63986011	63997703	chr11:63986011-63997703	1	+	63986456	63997546	0	8	227,154,62,99,119,85,195,355,	0,349,2325,2642,10518,10845,11038,11337,
#Partially deleted in new
chr11	63986412	63998415	chr11:63986412-63998415	3	+	63986456	63997546	0	7	102,62,99,119,85,195,1067,	0,1924,2241,10117,10444,10637,10936,
#Partially deleted in new
chr11	63986445	63998339	chr11:63986445-63998339	1	+	63986456	63997546	789624	7	69,62,126,119,85,195,991,	0,1891,2181,10084,10411,10604,10903,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	63986448	63990585	chr11:63986448-63990585	0	+	63986448	63986448	8553170	2	66,2249,	0,1888,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	63986468	63990632	chr11:63986468-63990632	0	+	63986468	63986468	8553170	4	46,62,99,346,	0,1868,2185,3818,
#Partially deleted in new
chr11	63986841	63997850	chr11:63986841-63997850	1	+	63988368	63997546	789624	7	197,62,99,119,85,195,502,	0,1495,1812,9688,10015,10208,10507,
#Partially deleted in new
chr11	63986843	63997425	chr11:63986843-63997425	0	+	63988354	63997117	789624	6	107,62,99,119,174,77,	0,1493,1810,9686,10227,10505,
#Partially deleted in new
chr11	63998557	64166061	chr11:63998557-64166061	3	-	63998867	64165994	0	11	130,35,82,74,31,122,117,30,117,102,365,	0,280,397,773,972,1084,1669,16694,152681,153734,167139,
#Deleted in new
chr11	63998559	63999222	chr11:63998559-63999222	0	-	63998559	63998559	8553170	3	128,35,268,	0,278,395,
#Deleted in new
chr11	63998565	63999390	chr11:63998565-63999390	0	-	63998565	63998565	8553170	3	122,82,60,	0,389,765,
#Deleted in new
chr11	63998569	63999361	chr11:63998569-63999361	0	-	63998569	63998569	8553170	4	118,35,46,31,	0,268,385,761,
#Partially deleted in new
chr11	63999382	64126934	chr11:63999382-64126934	0	-	63999382	63999382	8553170	6	22,31,122,117,30,81,	0,147,259,844,15869,127471,
#Partially deleted in new
chr11	64000073	64166106	chr11:64000073-64166106	0	-	64000073	64000073	8553170	4	270,117,102,410,	0,151165,152218,165623,
#Deleted in new
chr11	64001114	64001767	chr11:64001114-64001767	0	+	64001114	64001114	8553170	2	406,52,	0,601,
#Partially deleted in new
chr11	64009012	64165775	chr11:64009012-64165775	0	-	64009012	64009012	8553170	5	131,30,117,102,79,	0,6239,142226,143279,156684,
#Partially deleted in new
chr11	64035969	64103653	chr11:64035969-64103653	3	+	64035969	64035969	8553170	2	190,460,	0,67224,
#Partially deleted in new
chr11	64060423	64103513	chr11:64060423-64103513	0	+	64060423	64060423	8553170	2	233,320,	0,42770,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	64081689	64087175	chr11:64081689-64087175	3	+	64081689	64081689	8553170	3	352,118,262,	0,1263,5224,
#Partially deleted in new
chr11	64103187	64119173	chr11:64103187-64119173	3	+	64116267	64118292	789624	2	994,2955,	0,13031,
#Deleted in new
chr11	64118271	64119210	chr11:64118271-64119210	3	-	64118271	64118271	8553170	2	506,69,	0,870,
#Partially deleted in new
chr11	64148746	64166057	chr11:64148746-64166057	0	-	64148746	64148746	8553170	4	288,117,102,361,	0,2492,3545,16950,
#Partially deleted in new
chr11	64185271	64204543	chr11:64185271-64204543	1	+	64185824	64204126	0	14	703,210,142,142,169,127,103,121,97,125,37,104,173,490,	0,7806,8917,9207,10373,11999,12221,12582,14668,14897,17604,17853,18178,18782,
#Partially deleted in new
chr11	64186114	64204543	chr11:64186114-64204543	3	+	64186261	64204126	0	14	156,210,142,142,169,127,103,121,97,125,37,104,173,490,	0,6963,8074,8364,9530,11156,11378,11739,13825,14054,16761,17010,17335,17939,
#Partially deleted in new
chr11	64186184	64204219	chr11:64186184-64204219	0	+	64186261	64203544	789624	5	86,210,142,134,166,	0,6893,8004,17304,17869,
#Partially deleted in new
chr11	64186203	64204408	chr11:64186203-64204408	1	+	64186261	64204126	0	14	67,210,70,142,169,127,103,121,97,125,37,104,173,355,	0,6874,8057,8275,9441,11067,11289,11650,13736,13965,16672,16921,17246,17850,
#Partially deleted in new
chr11	64186224	64195876	chr11:64186224-64195876	1	+	64186261	64195852	789624	5	46,210,142,142,232,	0,6853,7964,8254,9420,
#Partially deleted in new
chr11	64186233	64193439	chr11:64186233-64193439	0	+	64186233	64186233	8553170	2	37,362,	0,6844,
#Partially deleted in new
chr11	64186302	64195811	chr11:64186302-64195811	0	+	64186302	64186302	8553170	5	219,210,142,142,167,	0,6775,7886,8176,9342,
#Deleted in new
chr11	64196835	64197974	chr11:64196835-64197974	0	+	64196835	64196835	8553170	4	211,127,103,121,	0,435,657,1018,
#Partially deleted in new
chr11	64196995	64200008	chr11:64196995-64200008	0	+	64196995	64196995	8553170	5	181,127,103,121,69,	0,275,497,858,2944,
#Partially deleted in new
chr11	64197189	64200221	chr11:64197189-64200221	0	+	64197189	64197189	8553170	5	208,103,121,97,53,	0,303,664,2750,2979,
#Partially deleted in new
chr11	64200251	64204143	chr11:64200251-64204143	0	+	64200251	64203680	789624	4	42,37,104,694,	0,2624,2873,3198,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	64202404	64203144	chr11:64202404-64203144	0	+	64202404	64202404	8553170	2	508,20,	0,720,
#Partially deleted in new
chr11	64206677	64219322	chr11:64206677-64219322	0	+	64207364	64219322	789624	7	137,171,234,120,169,103,72,	0,676,3933,4374,4597,4967,12573,
#Partially deleted in new
chr11	64206733	64223882	chr11:64206733-64223882	1	+	64207364	64223492	0	15	81,174,234,120,169,103,108,135,50,137,107,234,125,142,570,	0,617,3877,4318,4541,4911,12517,12790,13006,13145,13486,13702,14282,16314,16579,
#Partially deleted in new
chr11	64206733	64223886	chr11:64206733-64223886	3	+	64207364	64223492	0	15	81,174,234,120,169,103,108,135,50,125,107,234,125,142,574,	0,617,3877,4318,4541,4911,12517,12790,13006,13157,13486,13702,14282,16314,16579,
#Partially deleted in new
chr11	64207816	64211745	chr11:64207816-64211745	0	+	64211300	64211745	789624	5	90,234,120,169,101,	0,2794,3235,3458,3828,
#Partially deleted in new
chr11	64211649	64220598	chr11:64211649-64220598	0	+	64211649	64211649	8553170	6	98,108,135,45,125,379,	0,7601,7874,8095,8241,8570,
#Partially deleted in new
chr11	64211703	64220016	chr11:64211703-64220016	0	+	64211703	64211703	8553170	4	44,108,135,277,	0,7547,7820,8036,
#Deleted in new
chr11	64219476	64220450	chr11:64219476-64220450	0	+	64219476	64219476	8553170	4	182,50,125,231,	0,263,414,743,
#Partially deleted in new
chr11	64220436	64223848	chr11:64220436-64223848	0	+	64220436	64223492	789624	3	233,142,536,	0,2611,2876,
#Partially deleted in new
chr11	64220834	64223120	chr11:64220834-64223120	0	+	64220834	64220834	8553170	2	306,73,	0,2213,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	64223798	64226150	chr11:64223798-64226150	1	-	64223875	64225508	789624	7	169,111,57,175,170,82,101,	0,301,486,744,1002,1700,2251,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	64223799	64226254	chr11:64223799-64226254	1	-	64223875	64225860	789624	8	168,111,57,175,176,82,84,205,	0,300,485,743,995,1699,1986,2250,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	64223799	64226254	chr11:64223799-64226254	1	-	64223875	64225860	789624	7	168,57,175,170,82,84,205,	0,485,743,1001,1699,1986,2250,
#Deleted in new
chr11	64223829	64224824	chr11:64223829-64224824	0	-	64223829	64223829	8553170	5	138,111,207,64,24,	0,270,455,824,971,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	64223829	64226229	chr11:64223829-64226229	0	-	64223829	64223829	8553170	6	138,111,433,780,84,180,	0,270,455,971,1956,2220,
#Deleted in new
chr11	64223829	64224666	chr11:64223829-64224666	1	-	64223875	64224666	789624	4	138,63,57,124,	0,270,455,713,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	64223832	64226164	chr11:64223832-64226164	0	-	64223832	64223832	8553170	5	135,63,207,82,115,	0,267,452,1666,2217,
#Deleted in new
chr11	64223832	64224634	chr11:64223832-64224634	0	-	64224013	64224634	789624	3	378,57,92,	0,452,710,
#Deleted in new
chr11	64223841	64224669	chr11:64223841-64224669	0	-	64223841	64223841	8553170	3	126,242,127,	0,258,701,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	64223844	64226209	chr11:64223844-64226209	3	-	64223875	64225860	789624	8	123,111,57,175,170,82,84,160,	0,255,440,698,956,1654,1941,2205,
#Deleted in new
chr11	64223852	64225870	chr11:64223852-64225870	1	-	64223875	64225508	789624	6	115,57,175,170,82,85,	0,432,690,948,1646,1933,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	64223855	64226158	chr11:64223855-64226158	0	-	64223855	64223855	8553170	5	112,111,433,780,373,	0,244,429,945,1930,
#Partially deleted in new
chr11	64223876	64226233	chr11:64223876-64226233	0	-	64223876	64223876	8553170	4	841,780,84,43,	0,924,1909,2314,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	64224202	64226148	chr11:64224202-64226148	0	-	64224202	64225860	789624	7	8,57,175,176,82,84,99,	0,82,340,592,1296,1583,1847,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	64224758	64226141	chr11:64224758-64226141	0	-	64224758	64224758	8553170	2	822,92,	0,1291,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	64224800	64226234	chr11:64224800-64226234	0	-	64224800	64224800	8553170	2	170,185,	0,1249,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	64225940	64227023	chr11:64225940-64227023	0	+	64226652	64227023	789624	2	357,389,	0,694,
#Partially deleted in new
chr11	64226267	64230219	chr11:64226267-64230219	0	+	64226652	64229495	789624	4	30,498,94,37,	0,367,3210,3915,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	64226274	64228986	chr11:64226274-64228986	0	+	64226274	64226274	8553170	2	1640,415,	0,2297,
#Partially deleted in new
chr11	64226289	64230016	chr11:64226289-64230016	3	+	64226652	64229990	0	6	138,498,99,98,94,167,	0,345,1278,2957,3188,3560,
#Partially deleted in new
chr11	64226289	64230007	chr11:64226289-64230007	1	+	64226652	64229990	0	5	138,498,98,94,158,	0,345,2957,3188,3560,
#Partially deleted in new
chr11	64226289	64229983	chr11:64226289-64229983	0	+	64226652	64229495	789624	3	843,94,134,	0,3188,3560,
#Deleted in new
chr11	64226299	64227492	chr11:64226299-64227492	0	+	64226299	64226299	8553170	2	128,858,	0,335,
#Partially deleted in new
chr11	64226608	64229539	chr11:64226608-64229539	0	+	64226652	64229539	789624	5	524,93,99,98,62,	0,792,959,2638,2869,
#Deleted in new
chr11	64229130	64230016	chr11:64229130-64230016	0	+	64229130	64229130	8553170	3	214,94,167,	0,347,719,
#Partially deleted in new
chr11	64229213	64234292	chr11:64229213-64234292	3	-	64229213	64229213	8553170	2	824,99,	0,4980,
#Deleted in new
chr11	64229262	64230015	chr11:64229262-64230015	0	+	64229262	64229262	8553170	2	309,166,	0,587,
#Deleted in new
chr11	64229301	64230015	chr11:64229301-64230015	0	+	64229301	64229301	8553170	2	43,538,	0,176,
#Deleted in new
chr11	64229541	64230686	chr11:64229541-64230686	0	+	64229541	64229990	789624	4	30,221,137,255,	0,308,641,890,
#Partially deleted in new
chr11	64230277	64234281	chr11:64230277-64234281	3	+	64230854	64234184	789624	7	42,509,94,185,162,87,209,	0,154,1593,2152,2426,3616,3795,
#Partially deleted in new
chr11	64230277	64234278	chr11:64230277-64234278	1	+	64230854	64233917	789624	5	42,509,94,87,206,	0,154,1593,3616,3795,
#Partially deleted in new
chr11	64230566	64234184	chr11:64230566-64234184	1	+	64230854	64233917	789624	3	374,94,291,	0,1304,3327,
#Partially deleted in new
chr11	64230651	64232712	chr11:64230651-64232712	0	+	64230854	64231089	789624	5	289,116,94,185,9,	0,380,1219,1778,2052,
#Partially deleted in new
chr11	64230757	64234281	chr11:64230757-64234281	1	+	64230854	64234113	789624	5	183,94,185,165,388,	0,1113,1672,1943,3136,
#Partially deleted in new
chr11	64231222	64234352	chr11:64231222-64234352	0	-	64231222	64231222	8553170	2	68,159,	0,2971,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	64231615	64233044	chr11:64231615-64233044	0	+	64231615	64231615	8553170	2	999,341,	0,1088,
#Deleted in new
chr11	64231800	64232530	chr11:64231800-64232530	0	+	64231800	64231800	8553170	2	164,101,	0,629,
#Deleted in new
chr11	64231877	64232977	chr11:64231877-64232977	0	+	64231877	64231877	8553170	3	87,185,274,	0,552,826,
#Deleted in new
chr11	64231877	64232884	chr11:64231877-64232884	0	+	64231877	64231877	8553170	3	87,221,181,	0,516,826,
#Partially deleted in new
chr11	64231891	64234147	chr11:64231891-64234147	0	+	64231891	64234147	789624	5	73,105,162,87,75,	0,618,812,2002,2181,
#Deleted in new
chr11	64231961	64233046	chr11:64231961-64233046	0	+	64231961	64231961	8553170	3	3,185,346,	0,468,739,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	64233491	64234286	chr11:64233491-64234286	0	+	64233491	64233491	8553170	2	489,214,	0,581,
#Partially deleted in new
chr11	64234537	64238793	chr11:64234537-64238793	3	+	64234833	64237633	0	7	356,43,197,74,36,236,438,	0,920,1275,1716,2649,2882,3818,
#Partially deleted in new
chr11	64234819	64238775	chr11:64234819-64238775	1	+	64234833	64238377	0	7	74,43,197,74,36,135,420,	0,638,993,1434,2367,2701,3536,
#Deleted in new
chr11	64237126	64238787	chr11:64237126-64238787	0	+	64237126	64237126	8553170	3	96,135,432,	0,394,1229,
#Deleted in new
chr11	64237535	64237901	chr11:64237535-64237901	0	+	64237535	64237633	789624	2	120,105,	0,261,
#Partially deleted in new
chr11	64241002	64243669	chr11:64241002-64243669	0	+	64241002	64241002	8553170	4	130,175,113,219,	0,1381,2196,2448,
#Partially deleted in new
chr11	64241003	64244124	chr11:64241003-64244124	3	+	64242387	64244029	0	6	129,175,113,47,36,157,	0,1380,2195,2447,2837,2964,
#Partially deleted in new
chr11	64241073	64244103	chr11:64241073-64244103	0	+	64241073	64241073	8553170	5	59,175,299,36,136,	0,1310,2125,2767,2894,
#Partially deleted in new
chr11	64241155	64244126	chr11:64241155-64244126	1	+	64242387	64244029	0	6	83,175,113,47,36,159,	0,1228,2043,2295,2685,2812,
#Partially deleted in new
chr11	64241665	64243472	chr11:64241665-64243472	0	+	64242387	64243472	789624	4	329,175,113,22,	0,718,1533,1785,
#Partially deleted in new
chr11	64241747	64244132	chr11:64241747-64244132	1	+	64242387	64244029	0	6	466,175,113,47,36,165,	0,636,1451,1703,2093,2220,
#Deleted in new
chr11	64244479	64246193	chr11:64244479-64246193	1	-	64244753	64245239	789624	4	343,33,84,140,	0,450,724,1574,
#Deleted in new
chr11	64244483	64246941	chr11:64244483-64246941	3	-	64244753	64246673	789624	4	339,33,84,526,	0,446,720,1932,
#Deleted in new
chr11	64244548	64245816	chr11:64244548-64245816	1	-	64244753	64245320	789624	3	274,33,613,	0,381,655,
#Deleted in new
chr11	64245963	64248217	chr11:64245963-64248217	3	+	64245963	64245963	789624	2	126,265,	0,1989,
#Deleted in new
chr11	64246938	64249494	chr11:64246938-64249494	3	-	64246938	64246938	8553170	4	421,123,198,111,	0,1111,1462,2445,
#Deleted in new
chr11	64247053	64248177	chr11:64247053-64248177	1	+	64247053	64247053	789624	2	206,225,	0,899,
#Partially deleted in new
chr11	64251522	64267921	chr11:64251522-64267921	1	+	64251649	64267556	0	31	226,78,69,141,80,54,76,101,167,147,241,85,187,206,97,85,125,155,162,100,105,92,154,36,193,154,77,90,58,87,569,	0,2892,3225,3375,3711,3873,4018,4198,4853,5095,6950,7362,7535,8506,9877,10058,10429,10884,11124,11975,12168,12498,13428,13669,13787,14363,14603,14792,14972,15662,15830,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr11	64251546	64269150	chr11:64251546-64269150	3	+	64251649	64267556	0	32	202,78,69,141,80,54,76,101,167,147,241,85,187,206,97,85,125,155,162,100,105,92,154,36,193,154,77,90,58,87,218,647,	0,2868,3201,3351,3687,3849,3994,4174,4829,5071,6926,7338,7511,8482,9853,10034,10405,10860,11100,11951,12144,12474,13404,13645,13763,14339,14579,14768,14948,15638,15806,16957,
#Partially deleted in new
chr11	64251574	64267923	chr11:64251574-64267923	1	+	64251649	64267556	0	29	174,87,80,54,76,101,167,147,241,85,187,206,97,85,125,155,162,100,105,92,154,36,193,154,77,90,58,87,571,	0,3377,3659,3821,3966,4146,4801,5043,6898,7310,7483,8454,9825,10006,10377,10832,11072,11923,12116,12446,13376,13617,13735,14311,14551,14740,14920,15610,15778,
#Deleted in new
chr11	64263379	64265006	chr11:64263379-64265006	0	+	64263379	64263379	8553170	4	218,105,92,56,	0,311,641,1571,
#Partially deleted in new
chr11	64269829	64284639	chr11:64269829-64284639	1	-	64270208	64284368	0	3	508,191,458,	0,1783,14352,
#Partially deleted in new
chr11	64269833	64284669	chr11:64269833-64284669	3	-	64270208	64284368	0	4	504,191,195,39,	0,1779,14348,14797,
#Partially deleted in new
chr11	64270000	64284369	chr11:64270000-64284369	1	-	64270050	64284368	789624	2	337,188,	0,14181,
#Partially deleted in new
chr11	64270061	64288090	chr11:64270061-64288090	2	+	64270658	64288090	789624	5	600,372,50,226,26,	0,16448,16903,17659,18003,
#Partially deleted in new
chr11	64270255	64284653	chr11:64270255-64284653	1	-	64271638	64284368	789624	5	82,191,140,195,23,	0,1357,6648,13926,14375,
#Partially deleted in new
chr11	64270268	64271868	chr11:64270268-64271868	0	-	64270268	64271735	789624	2	69,256,	0,1344,
#Partially deleted in new
chr11	64270307	64272856	chr11:64270307-64272856	0	-	64270307	64271735	789624	3	30,191,138,	0,1305,2411,
#Partially deleted in new
chr11	64276760	64284704	chr11:64276760-64284704	0	-	64276760	64276760	8553170	3	283,195,74,	0,7421,7870,
#Partially deleted in new
chr11	64284338	64289404	chr11:64284338-64289404	1	+	64284366	64289365	789624	9	104,83,372,50,226,150,129,119,262,	0,342,2171,2626,3382,3726,4001,4264,4804,
#Partially deleted in new
chr11	64284810	64289500	chr11:64284810-64289500	1	+	64286524	64289087	789624	7	452,372,50,226,150,129,464,	0,1699,2154,2910,3254,3529,4226,
#Partially deleted in new
chr11	64284879	64287744	chr11:64284879-64287744	0	+	64286860	64287744	789624	4	501,225,50,24,	0,1777,2085,2841,
#Partially deleted in new
chr11	64285056	64288090	chr11:64285056-64288090	0	+	64286524	64288090	789624	5	324,372,50,226,26,	0,1453,1908,2664,3008,
#Partially deleted in new
chr11	64285253	64288714	chr11:64285253-64288714	0	+	64286524	64288352	789624	5	127,372,50,129,112,	0,1256,1711,3086,3349,
#Partially deleted in new
chr11	64285256	64289494	chr11:64285256-64289494	1	+	64286524	64289196	789624	7	124,372,50,226,129,119,458,	0,1253,1708,2464,3083,3346,3780,
#Deleted in new
chr11	64285476	64287003	chr11:64285476-64287003	0	+	64286524	64287003	789624	3	131,372,39,	0,1033,1488,
#Partially deleted in new
chr11	64285494	64288151	chr11:64285494-64288151	0	+	64286524	64288151	789624	5	70,372,50,226,87,	0,1015,1470,2226,2570,
#Partially deleted in new
chr11	64285698	64287814	chr11:64285698-64287814	0	+	64286524	64287814	789624	4	44,372,50,94,	0,811,1266,2022,
#Deleted in new
chr11	64285858	64286760	chr11:64285858-64286760	0	+	64286524	64286760	789624	2	276,251,	0,651,
#Partially deleted in new
chr11	64286109	64288013	chr11:64286109-64288013	0	+	64286109	64286109	8553170	3	772,50,293,	0,855,1611,
#Partially deleted in new
chr11	64286417	64289494	chr11:64286417-64289494	1	+	64286524	64289196	789624	7	464,50,226,150,129,119,458,	0,547,1303,1647,1922,2185,2619,
#Partially deleted in new
chr11	64286419	64289491	chr11:64286419-64289491	1	+	64286524	64289365	789624	7	462,50,226,150,129,119,349,	0,545,1301,1645,1920,2183,2723,
#Partially deleted in new
chr11	64286511	64288005	chr11:64286511-64288005	0	+	64286524	64288005	789624	3	370,50,11,	0,453,1483,
#Partially deleted in new
chr11	64286520	64288089	chr11:64286520-64288089	0	+	64286524	64288089	789624	4	361,50,37,25,	0,444,1389,1544,
#Deleted in new
chr11	64288082	64288680	chr11:64288082-64288680	0	+	64288082	64288082	8553170	2	386,78,	0,520,
#Deleted in new
chr11	64288362	64289292	chr11:64288362-64289292	0	+	64288362	64289196	789624	2	106,256,	0,674,
#Partially deleted in new
chr11	64291301	64297426	chr11:64291301-64297426	0	+	64291301	64291301	8553170	2	265,549,	0,5576,
#Partially deleted in new
chr11	64291324	64300028	chr11:64291324-64300028	1	+	64296887	64299824	789624	6	242,124,161,39,140,683,	0,5553,5794,6290,6785,8021,
#Partially deleted in new
chr11	64291408	64300006	chr11:64291408-64300006	3	+	64293018	64299726	0	7	158,266,124,161,187,140,661,	0,1533,5469,5710,6058,6701,7937,
#Partially deleted in new
chr11	64291419	64299440	chr11:64291419-64299440	0	+	64291419	64291419	8553170	5	147,402,187,140,95,	0,5458,6047,6690,7926,
#Partially deleted in new
chr11	64291703	64298202	chr11:64291703-64298202	0	+	64291703	64291703	8553170	5	91,124,161,76,93,	0,5174,5415,5874,6406,
#Partially deleted in new
chr11	64291721	64304769	chr11:64291721-64304769	3	+	64291721	64291721	789624	11	64,266,124,161,187,140,1086,331,80,67,227,	0,1220,5156,5397,5745,6388,7624,8935,11760,12051,12821,
#Partially deleted in new
chr11	64291731	64300011	chr11:64291731-64300011	0	+	64293018	64297617	789624	7	54,266,124,161,39,140,666,	0,1210,5146,5387,5883,6378,7614,
#Partially deleted in new
chr11	64291741	64297365	chr11:64291741-64297365	0	+	64291741	64291741	8553170	2	44,488,	0,5136,
#Partially deleted in new
chr11	64292009	64300031	chr11:64292009-64300031	1	+	64293018	64299726	0	7	109,266,124,161,187,140,686,	0,932,4868,5109,5457,6100,7336,
#Partially deleted in new
chr11	64292658	64299907	chr11:64292658-64299907	1	+	64293018	64299726	0	6	549,124,161,187,140,562,	0,4219,4460,4808,5451,6687,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	64296036	64296138	chr11:64296036-64296138	3	+	64296036	64296036	8553170	1	102,	0,
#Partially deleted in new
chr11	64296861	64299973	chr11:64296861-64299973	0	+	64296861	64296861	8553170	3	792,140,628,	0,1248,2484,
#Partially deleted in new
chr11	64300390	64304766	chr11:64300390-64304766	3	+	64300410	64304646	789624	5	41,331,80,67,224,	0,266,3091,3382,4152,
#Partially deleted in new
chr11	64300445	64304770	chr11:64300445-64304770	1	+	64300761	64304646	789624	4	542,80,67,228,	0,3036,3327,4097,
#Deleted in new
chr11	64303654	64304749	chr11:64303654-64304749	0	+	64303654	64303654	8553170	2	185,207,	0,888,
#Partially deleted in new
chr11	64305571	64316738	chr11:64305571-64316738	1	+	64307179	64315966	0	7	165,337,117,129,168,270,1032,	0,1596,8379,8667,9172,9429,10135,
#Partially deleted in new
chr11	64305577	64316738	chr11:64305577-64316738	3	+	64307179	64315966	0	7	159,337,117,129,171,270,1032,	0,1590,8373,8661,9163,9423,10129,
#Partially deleted in new
chr11	64305579	64315173	chr11:64305579-64315173	0	+	64314054	64315173	789624	5	157,117,129,171,173,	0,8371,8659,9161,9421,
#Partially deleted in new
chr11	64306226	64316743	chr11:64306226-64316743	1	+	64307179	64315966	0	7	222,337,117,129,171,270,1037,	0,941,7724,8012,8514,8774,9480,
#Deleted in new
chr11	64306445	64307508	chr11:64306445-64307508	0	+	64307179	64307508	789624	2	401,341,	0,722,
#Deleted in new
chr11	64313770	64315890	chr11:64313770-64315890	0	+	64313770	64313770	8553170	3	297,129,184,	0,468,1936,
#Deleted in new
chr11	64314283	64316029	chr11:64314283-64316029	0	+	64314283	64315945	789624	3	84,270,323,	0,717,1423,
#Deleted in new
chr11	64316459	64317487	chr11:64316459-64317487	1	-	64316860	64317311	789624	3	509,90,224,	0,598,804,
#Deleted in new
chr11	64316690	64317510	chr11:64316690-64317510	1	-	64317300	64317492	789624	2	457,247,	0,573,
#Deleted in new
chr11	64316690	64318084	chr11:64316690-64318084	3	-	64316860	64317526	0	4	278,90,102,636,	0,367,573,758,
#Deleted in new
chr11	64316693	64317341	chr11:64316693-64317341	0	-	64316693	64316693	8553170	2	275,284,	0,364,
#Deleted in new
chr11	64316694	64317558	chr11:64316694-64317558	1	-	64316860	64317526	0	4	274,75,102,110,	0,363,569,754,
#Deleted in new
chr11	64316695	64317553	chr11:64316695-64317553	1	-	64317006	64317526	789624	3	452,102,105,	0,568,753,
#Partially deleted in new
chr11	64318087	64321811	chr11:64318087-64321811	3	+	64318215	64321691	0	6	299,135,132,39,62,226,	0,1646,2573,2777,2919,3498,
#Partially deleted in new
chr11	64318181	64321742	chr11:64318181-64321742	1	+	64318215	64321691	0	4	205,39,62,157,	0,2683,2825,3404,
#Partially deleted in new
chr11	64318181	64321740	chr11:64318181-64321740	1	+	64318215	64321691	0	5	205,135,39,62,155,	0,1552,2683,2825,3404,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	64325049	64329504	chr11:64325049-64329504	3	-	64325049	64325049	8553170	3	282,53,337,	0,2434,4118,
#Partially deleted in new
chr11	64340222	64357534	chr11:64340222-64357534	3	+	64340266	64357094	789624	27	104,146,112,70,59,84,144,146,82,159,147,109,137,1161,128,118,96,141,257,144,187,146,99,167,207,69,496,	0,384,684,886,1047,1198,1376,1771,2071,2299,2956,3284,3555,3774,9108,9328,10937,11253,11907,12521,12831,13128,13492,13781,14971,15337,16816,
#Partially deleted in new
chr11	64340222	64357524	chr11:64340222-64357524	0	+	64340222	64340222	8553170	25	104,146,112,70,59,84,144,146,82,159,147,109,137,1161,128,118,457,257,144,443,99,167,207,69,486,	0,384,684,886,1047,1198,1376,1771,2071,2299,2956,3284,3555,3774,9108,9328,10937,11907,12521,12831,13492,13781,14971,15337,16816,
#Partially deleted in new
chr11	64341605	64357524	chr11:64341605-64357524	0	+	64341605	64341605	8553170	20	137,146,82,179,147,109,137,1161,128,118,457,257,144,187,146,99,167,207,69,486,	0,388,688,896,1573,1901,2172,2391,7725,7945,9554,10524,11138,11448,11745,12109,12398,13588,13954,15433,
#Deleted in new
chr11	64341848	64341904	chr11:64341848-64341904	3	-	64341848	64341848	5263520	1	56,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	64342730	64350695	chr11:64342730-64350695	0	+	64342730	64342730	8553170	7	77,152,109,137,1161,128,1145,	0,448,776,1047,1266,6600,6820,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	64343538	64350387	chr11:64343538-64350387	0	+	64343538	64343538	8553170	6	77,137,1161,128,118,497,	0,239,458,5792,6012,6352,
#Partially deleted in new
chr11	64348830	64357525	chr11:64348830-64357525	1	+	64348980	64357488	789624	14	222,128,118,96,141,257,144,187,146,99,25,207,69,487,	0,500,720,2329,2645,3299,3913,4223,4520,4884,5173,6363,6729,8208,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	64352885	64357528	chr11:64352885-64357528	0	+	64352885	64352885	8553170	5	355,146,99,167,2335,	0,465,829,1118,2308,
#Partially deleted in new
chr11	64353420	64357370	chr11:64353420-64357370	0	+	64353420	64353420	8553170	5	76,99,207,69,332,	0,294,1773,2139,3618,
#Partially deleted in new
chr11	64353714	64357533	chr11:64353714-64357533	1	+	64353725	64357094	789624	4	99,207,69,495,	0,1479,1845,3324,
#Partially deleted in new
chr11	64355342	64357531	chr11:64355342-64357531	0	+	64355342	64355342	8553170	2	286,493,	0,1696,
#Partially deleted in new
chr11	64359147	64372215	chr11:64359147-64372215	1	+	64359235	64371480	789624	17	143,72,219,116,108,81,104,151,165,129,113,94,174,195,160,164,933,	0,230,1015,1329,1986,2321,2494,2704,6153,8984,9341,9556,10298,10551,11077,11415,12135,
#Partially deleted in new
chr11	64359170	64372215	chr11:64359170-64372215	3	+	64359235	64371480	789624	17	120,72,219,116,108,81,104,151,165,129,134,94,174,195,160,164,933,	0,207,992,1306,1963,2298,2471,2681,6130,8961,9297,9533,10275,10528,11054,11392,12112,
#Deleted in new
chr11	64359180	64359788	chr11:64359180-64359788	0	+	64359180	64359180	8553170	2	110,411,	0,197,
#Partially deleted in new
chr11	64359181	64371685	chr11:64359181-64371685	0	+	64359235	64360228	789624	17	109,26,219,116,108,81,104,151,165,129,134,94,174,195,160,164,403,	0,196,981,1295,1952,2287,2460,2670,6119,8950,9286,9522,10264,10517,11043,11381,12101,
#Deleted in new
chr11	64359181	64360631	chr11:64359181-64360631	0	+	64359181	64359181	8553170	4	109,72,219,155,	0,196,981,1295,
#Partially deleted in new
chr11	64359283	64371341	chr11:64359283-64371341	0	+	64359283	64371341	789624	17	7,72,219,116,108,81,104,151,165,129,116,94,174,195,160,164,59,	0,94,879,1193,1850,2185,2358,2568,6017,8848,9202,9420,10162,10415,10941,11279,11999,
#Partially deleted in new
chr11	64360516	64368403	chr11:64360516-64368403	0	+	64360516	64360516	8553170	7	76,108,81,104,96,165,272,	0,617,952,1125,1390,4784,7615,
#Deleted in new
chr11	64360989	64362002	chr11:64360989-64362002	0	+	64360989	64360989	8553170	4	252,81,104,151,	0,479,652,862,
#Deleted in new
chr11	64368601	64368703	chr11:64368601-64368703	3	+	64368601	64368601	5263520	1	102,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	64394341	64395831	chr11:64394341-64395831	3	-	64394341	64394341	8553170	2	358,627,	0,863,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	64420390	64421057	chr11:64420390-64421057	1	+	64420390	64420390	8553170	2	232,326,	0,341,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	64420534	64432670	chr11:64420534-64432670	3	+	64420534	64420534	8553170	4	27,38,65,211,	0,7626,11769,11925,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	64449073	64451657	chr11:64449073-64451657	3	+	64449073	64449073	789624	2	579,1761,	0,823,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	64500852	64505386	chr11:64500852-64505386	3	+	64500852	64500852	8553170	3	62,144,316,	0,1585,4218,
#Partially deleted in new
chr11	64531043	64532970	chr11:64531043-64532970	7	+	64531043	64531043	16724991	3	178,78,139,	0,943,1788,
#Partially deleted in new
chr11	64555625	64572875	chr11:64555625-64572875	3	+	64555999	64571042	789624	10	767,104,155,169,121,116,215,109,207,1897,	0,3509,6378,6641,8682,9596,11973,13044,14026,15353,
#Partially deleted in new
chr11	64555689	64571527	chr11:64555689-64571527	1	+	64555999	64571042	789624	8	703,104,155,169,121,116,207,549,	0,3445,6314,6577,8618,9532,13962,15289,
#Partially deleted in new
chr11	64555955	64571527	chr11:64555955-64571527	1	+	64555999	64571042	789624	9	437,104,155,169,121,116,215,109,549,	0,3179,6048,6311,8352,9266,11643,12714,15023,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	64555966	64566283	chr11:64555966-64566283	0	+	64555966	64555966	8553170	5	426,104,155,169,1062,	0,3168,6037,6300,9255,
#Partially deleted in new
chr11	64555966	64565365	chr11:64555966-64565365	0	+	64555966	64555966	8553170	4	426,155,169,144,	0,6037,6300,9255,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	64562081	64566699	chr11:64562081-64566699	0	+	64562081	64562081	8553170	4	77,169,121,1478,	0,185,2226,3140,
#Deleted in new
chr11	64567598	64571527	chr11:64567598-64571527	0	+	64567598	64569656	789624	3	215,207,549,	0,2053,3380,
#Deleted in new
chr11	64567599	64571527	chr11:64567599-64571527	0	+	64567599	64571042	789624	4	214,109,75,549,	0,1070,2184,3379,
#Deleted in new
chr11	64590640	64602348	chr11:64590640-64602348	1	+	64591556	64601551	789624	9	178,688,104,124,116,215,109,204,861,	0,630,2138,7875,8167,9035,9726,10094,10847,
#Deleted in new
chr11	64590809	64602353	chr11:64590809-64602353	1	+	64591556	64601551	789624	8	1149,104,124,116,215,109,204,866,	0,1969,7706,7998,8866,9557,9925,10678,
#Deleted in new
chr11	64590809	64602348	chr11:64590809-64602348	3	+	64591556	64601551	789624	10	1149,104,155,169,124,116,215,109,204,861,	0,1969,2595,2825,7706,7998,8866,9557,9925,10678,
#Deleted in new
chr11	64591227	64602348	chr11:64591227-64602348	1	+	64593636	64601551	789624	10	320,300,104,169,124,116,215,109,204,861,	0,431,1551,2407,7288,7580,8448,9139,9507,10260,
#Deleted in new
chr11	64591262	64601551	chr11:64591262-64601551	1	+	64591556	64601551	789624	10	696,104,53,169,124,116,215,109,204,64,	0,1516,2142,2372,7253,7545,8413,9104,9472,10225,
#Partially deleted in new
chr11	64606173	64643315	chr11:64606173-64643315	1	-	64607195	64642803	0	7	1909,79,326,90,172,182,777,	0,14120,16579,20289,24228,29097,36365,
#Partially deleted in new
chr11	64606173	64713911	chr11:64606173-64713911	1	-	64607195	64713699	789624	22	1909,79,326,90,172,182,120,174,191,382,120,27,204,387,439,162,45,302,72,30,18,942,	0,14120,16579,20289,24228,29097,42045,42560,44274,45081,45861,47522,54158,54579,61076,62269,70819,79472,84231,86673,91601,106796,
#Partially deleted in new
chr11	64606173	64723188	chr11:64606173-64723188	1	-	64607195	64713699	789624	20	1909,79,326,172,182,120,174,191,382,120,204,387,439,162,24,302,30,18,974,218,	0,14120,16579,24228,29097,42045,42560,44274,45081,45861,54158,54579,61076,62269,70840,79472,86673,91601,106796,116797,
#Partially deleted in new
chr11	64606173	64623996	chr11:64606173-64623996	0	-	64606173	64606173	8553170	3	1909,79,1244,	0,14120,16579,
#Partially deleted in new
chr11	64606175	64723188	chr11:64606175-64723188	3	-	64607195	64713699	789624	23	1907,79,326,90,172,182,120,174,191,382,120,27,204,387,439,162,45,302,72,30,18,974,218,	0,14118,16577,20287,24226,29095,42043,42558,44272,45079,45859,47520,54156,54577,61074,62267,70817,79470,84229,86671,91599,106794,116795,
#Partially deleted in new
chr11	64606176	64713943	chr11:64606176-64713943	1	-	64607195	64713699	789624	22	1906,79,326,90,172,182,120,174,191,382,120,27,204,387,439,162,24,302,72,30,18,974,	0,14117,16576,20286,24225,29094,42042,42557,44271,45078,45858,47519,54155,54576,61073,62266,70837,79469,84228,86670,91598,106793,
#Partially deleted in new
chr11	64607043	64622796	chr11:64607043-64622796	0	-	64607043	64607043	8553170	3	457,79,44,	0,13250,15709,
#Partially deleted in new
chr11	64622752	64642686	chr11:64622752-64642686	0	-	64622752	64642686	789624	4	326,172,182,148,	0,7649,12518,19786,
#Partially deleted in new
chr11	64630404	64637445	chr11:64630404-64637445	0	-	64630404	64630404	8553170	3	169,182,41,	0,4866,7000,
#Partially deleted in new
chr11	64630485	64643486	chr11:64630485-64643486	0	-	64630485	64630485	8553170	4	88,182,62,230,	0,4785,12053,12771,
#Partially deleted in new
chr11	64646398	64659681	chr11:64646398-64659681	3	+	64646398	64646398	8553170	2	180,289,	0,12994,
#Deleted in new
chr11	64651278	64656120	chr11:64651278-64656120	0	-	64651278	64651278	8553170	4	358,120,27,33,	0,756,2417,4809,
#Deleted in new
chr11	64660469	64661378	chr11:64660469-64661378	0	-	64660469	64660469	8553170	3	66,387,158,	0,283,751,
#Partially deleted in new
chr11	64667437	64712745	chr11:64667437-64712745	0	-	64667437	64712745	789624	7	251,162,302,72,30,18,43,	0,1005,18208,22967,25409,30337,45265,
#Partially deleted in new
chr11	64667666	64712981	chr11:64667666-64712981	0	-	64667666	64712981	789624	7	22,162,302,72,30,18,12,	0,776,17979,22738,25180,30108,45303,
#Partially deleted in new
chr11	64668481	64713097	chr11:64668481-64713097	0	-	64668481	64713097	789624	5	123,302,72,18,128,	0,17164,21923,29293,44488,
#Partially deleted in new
chr11	64675176	64713943	chr11:64675176-64713943	0	-	64675176	64675176	8553170	4	1861,302,18,974,	0,10469,22598,37793,
#Partially deleted in new
chr11	64726910	64745456	chr11:64726910-64745456	3	-	64727301	64742866	0	17	221,65,180,37,142,116,123,78,282,117,174,151,132,63,103,144,182,	0,385,1952,2851,3142,8201,8631,8992,9842,12449,12725,13102,14037,14528,15099,15883,18364,
#Partially deleted in new
chr11	64726910	64743789	chr11:64726910-64743789	1	-	64727301	64742866	0	16	221,68,180,37,142,116,123,78,282,117,174,151,132,63,103,996,	0,385,1952,2851,3142,8201,8631,8992,9842,12449,12725,13102,14037,14528,15099,15883,
#Partially deleted in new
chr11	64726910	64744834	chr11:64726910-64744834	1	-	64727301	64742866	0	17	221,65,180,37,142,116,123,78,282,117,174,151,132,63,103,144,93,	0,385,1952,2851,3142,8201,8631,8992,9842,12449,12725,13102,14037,14528,15099,15883,17831,
#Partially deleted in new
chr11	64726910	64744178	chr11:64726910-64744178	1	-	64727301	64742866	0	17	221,65,180,37,142,116,123,78,282,117,174,151,132,63,103,144,176,	0,385,1952,2851,3142,8201,8631,8992,9842,12449,12725,13102,14037,14528,15099,15883,17092,
#Partially deleted in new
chr11	64726910	64744122	chr11:64726910-64744122	0	-	64741046	64742866	789624	17	221,65,180,37,142,116,123,78,282,117,174,151,132,63,23,144,120,	0,385,1952,2851,3142,8201,8631,8992,9842,12449,12725,13102,14037,14528,15099,15883,17092,
#Partially deleted in new
chr11	64726910	64740883	chr11:64726910-64740883	0	-	64726910	64726910	8553170	12	221,68,180,37,142,116,123,78,282,117,174,871,	0,385,1952,2851,3142,8201,8631,8992,9842,12449,12725,13102,
#Partially deleted in new
chr11	64726945	64735266	chr11:64726945-64735266	0	-	64726945	64726945	8553170	5	415,180,37,142,155,	0,1917,2816,3107,8166,
#Partially deleted in new
chr11	64730180	64737034	chr11:64730180-64737034	0	-	64730180	64730180	8553170	4	14,116,439,282,	0,4931,5361,6572,
#Deleted in new
chr11	64735111	64737254	chr11:64735111-64737254	0	-	64735111	64735111	8553170	4	116,123,78,502,	0,430,791,1641,
#Deleted in new
chr11	64735373	64737244	chr11:64735373-64737244	0	-	64735373	64735373	8553170	3	291,78,492,	0,529,1379,
#Deleted in new
chr11	64739378	64742946	chr11:64739378-64742946	0	-	64740439	64742866	789624	8	98,174,151,82,132,63,103,153,	0,257,634,989,1569,2060,2631,3415,
#Deleted in new
chr11	64739635	64744118	chr11:64739635-64744118	0	-	64739635	64742866	789624	8	174,151,132,63,103,144,52,116,	0,377,1312,1803,2374,3158,4181,4367,
#Deleted in new
chr11	64740125	64744831	chr11:64740125-64744831	0	-	64740439	64742866	789624	7	38,79,132,63,103,144,90,	0,242,822,1313,1884,2668,4616,
#Deleted in new
chr11	64740865	64744145	chr11:64740865-64744145	1	-	64740871	64742866	789624	5	214,63,103,144,143,	0,573,1144,1928,3137,
#Deleted in new
chr11	64740865	64744859	chr11:64740865-64744859	1	-	64740871	64742866	789624	5	214,63,103,144,118,	0,573,1144,1928,3876,
#Deleted in new
chr11	64740865	64745333	chr11:64740865-64745333	1	-	64740871	64742866	789624	5	214,63,103,144,59,	0,573,1144,1928,4409,
#Deleted in new
chr11	64740865	64742937	chr11:64740865-64742937	1	-	64741046	64742866	789624	4	214,63,23,144,	0,573,1144,1928,
#Deleted in new
chr11	64740865	64742937	chr11:64740865-64742937	1	-	64741046	64742866	789624	3	214,95,144,	0,573,1928,
#Deleted in new
chr11	64740867	64744589	chr11:64740867-64744589	1	-	64740871	64742866	789624	4	212,63,103,1796,	0,571,1142,1926,
#Deleted in new
chr11	64741025	64744997	chr11:64741025-64744997	0	-	64741025	64742866	789624	5	54,63,103,144,65,	0,413,984,1768,3907,
#Deleted in new
chr11	64741067	64744867	chr11:64741067-64744867	0	-	64741067	64742866	789624	6	12,63,103,144,150,126,	0,371,942,1726,3265,3674,
#Deleted in new
chr11	64742510	64744860	chr11:64742510-64744860	0	-	64742510	64742510	8553170	2	427,119,	0,2231,
#Deleted in new
chr11	64742825	64744317	chr11:64742825-64744317	0	-	64742825	64742866	789624	2	112,288,	0,1204,
#Partially deleted in new
chr11	64746388	64760297	chr11:64746388-64760297	3	-	64746658	64759898	0	20	420,67,135,208,142,59,148,102,115,164,147,93,144,83,112,132,104,79,102,642,	0,532,835,3987,4936,5208,5535,6014,6684,7130,7490,7864,8304,8884,9058,11390,11857,12048,12214,13267,
#Partially deleted in new
chr11	64746388	64759974	chr11:64746388-64759974	1	-	64746658	64759898	0	18	420,67,135,208,142,59,148,102,115,164,147,93,144,83,112,132,21,319,	0,532,835,3987,4936,5208,5535,6014,6684,7130,7490,7864,8304,8884,9058,11390,11857,13267,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	64746388	64748888	chr11:64746388-64748888	0	-	64746388	64746388	8553170	3	420,67,1665,	0,532,835,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	64751147	64752015	chr11:64751147-64752015	0	-	64751147	64751147	8553170	3	319,59,92,	0,449,776,
#Deleted in new
chr11	64753670	64754421	chr11:64753670-64754421	0	-	64753670	64753670	8553170	3	12,147,169,	0,208,582,
#Partially deleted in new
chr11	64764605	64778747	chr11:64764605-64778747	1	-	64765453	64778392	0	13	913,180,60,274,181,108,116,184,90,153,76,129,386,	0,2294,2586,2965,3500,4416,4617,4820,5358,5650,8824,11892,13756,
#Partially deleted in new
chr11	64764605	64778786	chr11:64764605-64778786	3	-	64765388	64778392	0	14	913,205,180,60,274,181,108,116,184,90,153,76,129,425,	0,1345,2294,2586,2965,3500,4416,4617,4820,5358,5650,8824,11892,13756,
#Partially deleted in new
chr11	64764605	64778469	chr11:64764605-64778469	1	-	64765453	64778392	0	13	913,180,60,274,181,108,116,184,90,153,76,129,483,	0,2294,2586,2965,3500,4416,4617,4820,5358,5650,8824,11892,13381,
#Partially deleted in new
chr11	64764605	64778730	chr11:64764605-64778730	1	-	64765817	64778392	0	13	1550,180,60,274,181,108,116,184,90,153,76,129,369,	0,2294,2586,2965,3500,4416,4617,4820,5358,5650,8824,11892,13756,
#Partially deleted in new
chr11	64764605	64778747	chr11:64764605-64778747	1	-	64765388	64778392	0	13	913,180,60,278,181,108,116,184,90,153,76,129,386,	0,2294,2586,2961,3500,4416,4617,4820,5358,5650,8824,11892,13756,
#Partially deleted in new
chr11	64764605	64778747	chr11:64764605-64778747	0	-	64770033	64778392	789624	12	913,180,60,278,181,108,116,184,90,153,129,386,	0,2294,2586,2961,3500,4416,4617,4820,5358,5650,11892,13756,
#Deleted in new
chr11	64765289	64767844	chr11:64765289-64767844	0	-	64765453	64767844	789624	4	229,180,84,274,	0,1610,1902,2281,
#Deleted in new
chr11	64765603	64767617	chr11:64765603-64767617	0	-	64765905	64767617	789624	4	552,180,60,51,	0,1296,1588,1963,
#Partially deleted in new
chr11	64765651	64777760	chr11:64765651-64777760	1	-	64765817	64776579	0	13	504,180,60,274,181,108,116,184,90,153,76,129,262,	0,1248,1540,1919,2454,3370,3571,3774,4312,4604,7778,10846,11847,
#Deleted in new
chr11	64766020	64769071	chr11:64766020-64769071	0	-	64766020	64769071	789624	6	135,180,55,274,181,50,	0,879,1171,1550,2085,3001,
#Deleted in new
chr11	64766413	64767646	chr11:64766413-64767646	0	-	64766413	64766413	8553170	3	666,60,76,	0,778,1157,
#Deleted in new
chr11	64768170	64769669	chr11:64768170-64769669	0	-	64768170	64768170	8553170	4	116,108,116,244,	0,851,1052,1255,
#Deleted in new
chr11	64769277	64770639	chr11:64769277-64770639	0	-	64769277	64769277	8553170	4	61,184,90,384,	0,148,686,978,
#Deleted in new
chr11	64769541	64771607	chr11:64769541-64771607	0	-	64769541	64769541	8553170	4	68,90,153,144,	0,422,714,1922,
#Partially deleted in new
chr11	64770033	64778763	chr11:64770033-64778763	1	-	64770033	64778392	789624	4	20,153,129,402,	0,222,6464,8328,
#Partially deleted in new
chr11	64770277	64778542	chr11:64770277-64778542	0	-	64770277	64770277	8553170	5	131,74,76,129,181,	0,1186,3152,6220,8084,
#Partially deleted in new
chr11	64770296	64778507	chr11:64770296-64778507	0	-	64778021	64778392	789624	5	112,76,129,160,146,	0,3133,6201,7690,8065,
#Partially deleted in new
chr11	64770379	64777761	chr11:64770379-64777761	0	-	64770379	64776579	789624	4	29,76,129,241,	0,3050,6118,7141,
#Partially deleted in new
chr11	64773022	64778504	chr11:64773022-64778504	0	-	64773022	64773022	8553170	3	483,129,143,	0,3475,5339,
#Deleted in new
chr11	64776045	64778763	chr11:64776045-64778763	0	-	64776045	64776045	8553170	2	581,402,	0,2316,
#Deleted in new
chr11	64776045	64778037	chr11:64776045-64778037	0	-	64776045	64776045	8553170	2	581,51,	0,1941,
#Deleted in new
chr11	64778953	64779405	chr11:64778953-64779405	3	+	64778953	64778953	8553170	1	452,	0,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr11	64784913	64803241	chr11:64784913-64803241	3	-	64789536	64803149	789624	32	4711,56,71,87,69,178,104,59,118,61,80,85,42,89,106,34,39,44,59,79,108,82,63,132,73,43,48,56,65,91,58,188,	0,4816,4975,5274,5480,6995,7258,7450,11359,11579,11720,11895,12068,12190,12361,12587,12712,13880,14507,14691,15195,15397,15850,15986,16197,16665,16796,17152,17505,17649,17971,18140,
#Partially deleted in new
chr11	64788817	64803162	chr11:64788817-64803162	0	-	64802607	64803149	789624	32	807,56,71,87,69,178,104,59,118,61,80,85,42,89,106,34,39,44,59,79,108,82,63,132,73,43,48,56,65,65,58,109,	0,912,1071,1370,1576,3091,3354,3546,7455,7675,7816,7991,8164,8286,8457,8683,8808,9976,10603,10787,11291,11493,11946,12082,12293,12761,12892,13248,13601,13745,14067,14236,
#Partially deleted in new
chr11	64789136	64803241	chr11:64789136-64803241	1	-	64789536	64803149	789624	32	488,56,71,87,69,178,104,59,118,61,80,85,42,65,106,34,39,44,59,79,108,82,63,132,73,43,48,56,65,91,58,188,	0,593,752,1051,1257,2772,3035,3227,7136,7356,7497,7672,7845,7967,8138,8364,8489,9657,10284,10468,10972,11174,11627,11763,11974,12442,12573,12929,13282,13426,13748,13917,
#Partially deleted in new
chr11	64789136	64796498	chr11:64789136-64796498	0	-	64790432	64796498	789624	10	488,56,71,87,57,129,104,59,118,6,	0,593,752,1051,1257,2821,3035,3227,7136,7356,
#Partially deleted in new
chr11	64789136	64797343	chr11:64789136-64797343	0	-	64789136	64789136	8553170	13	488,56,71,87,69,514,118,61,80,85,42,65,69,	0,593,752,1051,1257,2772,7136,7356,7497,7672,7845,7967,8138,
#Partially deleted in new
chr11	64789536	64803149	chr11:64789536-64803149	0	-	64802607	64803149	789624	32	88,56,71,87,69,178,104,59,118,61,80,85,42,89,106,34,39,44,59,79,108,82,36,132,73,43,48,56,65,65,58,96,	0,193,352,651,857,2372,2635,2827,6736,6956,7097,7272,7445,7567,7738,7964,8089,9257,9884,10068,10572,10774,11227,11363,11574,12042,12173,12529,12882,13026,13348,13517,
#Partially deleted in new
chr11	64789888	64799659	chr11:64789888-64799659	0	-	64789888	64789888	8553170	17	71,87,69,178,251,118,61,80,85,42,89,106,34,39,44,59,55,	0,299,505,2020,2283,6384,6604,6745,6920,7093,7215,7386,7612,7737,8905,9532,9716,
#Partially deleted in new
chr11	64796970	64799634	chr11:64796970-64799634	0	-	64796970	64796970	8553170	7	53,89,260,39,44,59,30,	0,133,304,655,1823,2450,2634,
#Partially deleted in new
chr11	64799420	64803175	chr11:64799420-64803175	0	-	64799420	64803149	789624	13	59,79,108,82,63,73,43,48,56,65,91,58,122,	0,184,688,890,1343,1690,2158,2289,2645,2998,3142,3464,3633,
#Partially deleted in new
chr11	64800181	64801813	chr11:64800181-64801813	0	-	64800181	64800181	8553170	7	35,82,63,132,73,43,104,	0,129,582,718,929,1397,1528,
#Partially deleted in new
chr11	64800335	64803010	chr11:64800335-64803010	0	-	64800335	64800335	8553170	8	57,63,73,48,56,65,91,126,	0,428,775,1374,1730,2083,2227,2549,
#Partially deleted in new
chr11	64800347	64803129	chr11:64800347-64803129	0	-	64800347	64800347	8553170	9	45,63,132,73,48,56,65,91,245,	0,416,552,763,1362,1718,2071,2215,2537,
#Partially deleted in new
chr11	64801709	64803227	chr11:64801709-64803227	0	-	64802607	64803149	789624	6	48,56,65,68,58,174,	0,356,709,853,1175,1344,
#Partially deleted in new
chr11	64803509	64810485	chr11:64803509-64810485	1	-	64804333	64810109	789624	8	1307,136,137,88,41,129,209,821,	0,2125,2722,3501,3669,4042,4381,6155,
#Partially deleted in new
chr11	64803515	64810716	chr11:64803515-64810716	1	-	64804333	64810109	0	10	1301,165,136,137,88,41,129,209,468,87,	0,1518,2119,2716,3495,3663,4036,4375,6149,7114,
#Partially deleted in new
chr11	64803515	64810741	chr11:64803515-64810741	3	-	64804333	64810109	0	10	1301,165,136,137,88,41,129,209,468,474,	0,1518,2119,2716,3495,3663,4036,4375,6149,6752,
#Partially deleted in new
chr11	64803515	64810558	chr11:64803515-64810558	1	-	64804333	64810109	0	10	1301,165,136,137,88,41,129,104,468,45,	0,1518,2119,2716,3495,3663,4036,4480,6149,6998,
#Partially deleted in new
chr11	64803515	64810608	chr11:64803515-64810608	1	-	64804333	64810109	0	9	1301,165,136,137,88,41,129,209,944,	0,1518,2119,2716,3495,3663,4036,4375,6149,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	64803523	64811294	chr11:64803523-64811294	1	-	64804333	64810109	0	10	1293,165,136,137,88,41,129,209,483,481,	0,1510,2111,2708,3487,3655,4028,4367,6126,7290,
#Partially deleted in new
chr11	64803523	64810741	chr11:64803523-64810741	1	-	64804333	64810109	0	10	1293,165,136,137,88,41,129,209,483,474,	0,1510,2111,2708,3487,3655,4028,4367,6126,6744,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	64803523	64811294	chr11:64803523-64811294	1	-	64804333	64810109	0	11	1293,165,136,137,88,41,129,209,483,92,261,	0,1510,2111,2708,3487,3655,4028,4367,6126,7290,7510,
#Partially deleted in new
chr11	64804333	64810132	chr11:64804333-64810132	1	-	64804333	64810109	0	9	483,165,136,137,88,41,129,209,483,	0,700,1301,1898,2677,2845,3218,3557,5316,
#Partially deleted in new
chr11	64804374	64806368	chr11:64804374-64806368	0	-	64804374	64804374	8553170	3	442,165,734,	0,659,1260,
#Partially deleted in new
chr11	64805125	64805992	chr11:64805125-64805992	0	-	64805125	64805125	8553170	3	73,136,105,	0,509,762,
#Partially deleted in new
chr11	64806241	64810558	chr11:64806241-64810558	0	-	64806241	64810109	789624	7	127,88,41,129,209,468,45,	0,769,937,1310,1649,3423,4272,
#Partially deleted in new
chr11	64807079	64810581	chr11:64807079-64810581	0	-	64807079	64810109	789624	6	19,41,129,209,468,56,	0,99,472,811,2585,3446,
#Partially deleted in new
chr11	64807551	64810521	chr11:64807551-64810521	0	-	64807551	64810109	789624	4	129,209,468,64,	0,339,2113,2906,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	64809669	64811294	chr11:64809669-64811294	0	-	64809669	64810109	789624	3	463,92,261,	0,1144,1364,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	64809669	64811294	chr11:64809669-64811294	0	-	64809669	64810109	789624	2	463,481,	0,1144,
#Partially deleted in new
chr11	64823386	64844569	chr11:64823386-64844569	3	-	64824472	64844569	789624	37	1143,86,124,118,121,85,98,600,63,217,82,140,134,106,60,99,53,89,149,115,107,73,122,90,180,104,81,98,80,249,201,94,149,96,84,92,160,	0,3083,3284,3663,3891,4140,4299,6084,6807,8118,9041,9217,9439,9844,10213,10351,10538,10879,11042,11462,11660,11960,12113,12375,12730,13040,13352,13535,14696,15267,15646,16091,16733,17166,18263,18426,21023,
#Partially deleted in new
chr11	64830391	64832482	chr11:64830391-64832482	0	-	64830391	64830391	8553170	3	67,217,55,	0,1113,2036,
#Deleted in new
chr11	64832919	64833785	chr11:64832919-64833785	0	-	64832919	64832919	8553170	4	40,146,60,48,	0,271,680,818,
#Deleted in new
chr11	64833279	64833811	chr11:64833279-64833811	0	-	64833279	64833279	8553170	2	380,74,	0,458,
#Partially deleted in new
chr11	64851641	64878719	chr11:64851641-64878719	3	-	64854332	64878464	0	5	3216,165,413,98,659,	0,3680,8282,22779,26419,
#Partially deleted in new
chr11	64852726	64879713	chr11:64852726-64879713	1	-	64854332	64879630	789624	6	2131,165,413,98,427,102,	0,2595,7197,21694,25334,26885,
#Partially deleted in new
chr11	64852730	64879677	chr11:64852730-64879677	1	-	64854332	64878464	0	7	2127,165,413,98,427,322,66,	0,2591,7193,21690,25330,26104,26881,
#Partially deleted in new
chr11	64852730	64856663	chr11:64852730-64856663	0	-	64852730	64852730	8553170	2	2127,1342,	0,2591,
#Partially deleted in new
chr11	64854291	64855095	chr11:64854291-64855095	0	-	64854291	64854291	8553170	2	566,82,	0,722,
#Partially deleted in new
chr11	64854611	64877917	chr11:64854611-64877917	0	-	64854611	64874514	789624	5	246,165,413,98,93,	0,710,5312,19809,23213,
#Partially deleted in new
chr11	64855051	64860045	chr11:64855051-64860045	0	-	64855051	64855051	8553170	2	435,122,	0,4872,
#Partially deleted in new
chr11	64855321	64879699	chr11:64855321-64879699	0	-	64855321	64879630	789624	5	165,413,98,427,88,	0,4602,19099,22739,24290,
#Partially deleted in new
chr11	64859625	64878541	chr11:64859625-64878541	0	-	64859625	64859625	8553170	3	711,98,481,	0,14795,18435,
#Partially deleted in new
chr11	64859944	64875666	chr11:64859944-64875666	0	-	64859944	64874514	789624	3	392,98,56,	0,14476,15666,
#Partially deleted in new
chr11	64874477	64888296	chr11:64874477-64888296	0	-	64874477	64878464	789624	3	41,424,69,	0,3583,13750,
#Partially deleted in new
chr11	64874487	64879700	chr11:64874487-64879700	0	-	64874487	64878464	789624	3	31,427,99,	0,3573,5114,
#Deleted in new
chr11	64878638	64879681	chr11:64878638-64879681	0	-	64878638	64878638	8553170	2	518,70,	0,973,
#Deleted in new
chr11	64881534	64881945	chr11:64881534-64881945	7	+	64881534	64881534	16724991	1	411,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	64889559	64893449	chr11:64889559-64893449	3	-	64889559	64889559	789624	2	3608,39,	0,3851,
#Partially deleted in new
chr11	64891136	64891246	chr11:64891136-64891246	3	-	64891136	64891136	5263520	1	110,	0,
#Partially deleted in new
chr11	64891354	64891439	chr11:64891354-64891439	3	-	64891354	64891354	5263520	1	85,	0,
#Partially deleted in new
chr11	64894545	64917248	chr11:64894545-64917248	3	-	64894972	64917135	789624	41	664,153,155,122,83,73,136,85,102,207,136,209,215,127,165,77,71,93,107,81,200,151,185,140,143,160,97,244,156,93,148,238,141,165,97,99,136,103,153,163,284,	0,744,1916,2202,2866,3125,3293,3540,3715,4090,5948,6338,7416,7714,7970,8742,9044,11017,11196,11567,11788,12119,12709,12979,13202,14445,14725,15135,15494,16070,16261,16492,17296,17539,17781,18492,18720,19275,19535,19792,22419,
#Partially deleted in new
chr11	64894545	64913395	chr11:64894545-64913395	0	-	64894972	64913395	789624	37	664,153,155,122,83,73,136,85,102,207,136,209,215,127,171,77,71,93,107,81,200,151,185,140,143,160,97,244,156,93,148,238,141,165,97,99,130,	0,744,1916,2202,2866,3125,3293,3540,3715,4090,5948,6338,7416,7714,7964,8742,9044,11017,11196,11567,11788,12119,12709,12979,13202,14445,14725,15135,15494,16070,16261,16492,17296,17539,17781,18492,18720,
#Partially deleted in new
chr11	64894571	64917211	chr11:64894571-64917211	1	-	64894972	64917127	789624	7	638,153,155,100,25,163,247,	0,718,1890,2176,19637,19766,22393,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	64897039	64897730	chr11:64897039-64897730	0	-	64897039	64897039	8553170	2	455,60,	0,631,
#Deleted in new
chr11	64898362	64898437	chr11:64898362-64898437	3	-	64898362	64898362	5263520	1	75,	0,
#Deleted in new
chr11	64902386	64902455	chr11:64902386-64902455	3	-	64902386	64902386	5263520	1	69,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	64912610	64917206	chr11:64912610-64917206	0	-	64912610	64912610	8553170	3	526,1235,270,	0,655,4326,
#Partially deleted in new
chr11	64914195	64917206	chr11:64914195-64917206	0	-	64914195	64914195	8553170	2	305,270,	0,2741,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	64917552	64924460	chr11:64917552-64924460	0	+	64917552	64917552	8553170	4	88,82,118,275,	0,715,5432,6633,
#Partially deleted in new
chr11	64917598	64928148	chr11:64917598-64928148	0	+	64925734	64928148	789624	5	42,463,197,102,83,	0,7872,9113,10203,10467,
#Partially deleted in new
chr11	64924670	64934473	chr11:64924670-64934473	3	+	64925734	64933844	789624	14	358,463,197,102,93,131,60,109,54,51,120,128,102,777,	0,800,2041,3131,3395,3624,5651,5810,6765,6888,7078,8094,8474,9026,
#Partially deleted in new
chr11	64924720	64928158	chr11:64924720-64928158	0	+	64926770	64928158	789624	5	308,86,197,102,93,	0,1127,1991,3081,3345,
#Partially deleted in new
chr11	64927733	64930334	chr11:64927733-64930334	0	+	64927733	64927733	8553170	4	170,93,131,13,	0,332,561,2588,
#Deleted in new
chr11	64934470	64935888	chr11:64934470-64935888	3	-	64934772	64935460	789624	4	404,185,103,55,	0,520,887,1363,
#Deleted in new
chr11	64934643	64935523	chr11:64934643-64935523	1	-	64934772	64935460	789624	3	231,185,166,	0,347,714,
#Deleted in new
chr11	64934861	64935882	chr11:64934861-64935882	1	-	64934921	64935460	789624	3	314,103,49,	0,496,972,
#Partially deleted in new
chr11	64937516	64940646	chr11:64937516-64940646	0	-	64939662	64940646	789624	3	154,106,73,	0,2145,3057,
#Partially deleted in new
chr11	64938229	64972023	chr11:64938229-64972023	1	-	64938524	64959405	789624	9	344,106,73,64,92,46,118,47,147,	0,1432,2344,7860,9144,16527,21075,21859,33647,
#Partially deleted in new
chr11	64938230	64939865	chr11:64938230-64939865	0	-	64938230	64938230	8553170	2	343,204,	0,1431,
#Partially deleted in new
chr11	64938230	64972085	chr11:64938230-64972085	0	-	64954558	64959405	789624	12	343,106,73,64,92,32,126,76,760,118,47,209,	0,1431,2343,7859,9143,9557,11512,12124,15812,21074,21858,33646,
#Partially deleted in new
chr11	64938453	64960137	chr11:64938453-64960137	1	-	64939662	64959405	789624	10	120,106,73,92,32,126,76,46,118,49,	0,1208,2120,8920,9334,11289,11901,16303,20851,21635,
#Partially deleted in new
chr11	64938456	64971886	chr11:64938456-64971886	3	-	64939662	64959405	789624	11	117,106,73,92,32,126,76,46,118,47,10,	0,1205,2117,8917,9331,11286,11898,16300,20848,21632,33420,
#Partially deleted in new
chr11	64987942	64997045	chr11:64987942-64997045	3	-	64989128	64996914	789624	3	1870,102,170,	0,6505,8933,
#Deleted in new
chr11	64987944	64990273	chr11:64987944-64990273	1	-	64989128	64989698	789624	2	1868,81,	0,2248,
#Deleted in new
chr11	64987945	64990514	chr11:64987945-64990514	0	-	64987945	64987945	8553170	1	2569,	0,
#Deleted in new
chr11	64988783	64990274	chr11:64988783-64990274	1	-	64989128	64990142	789624	2	1029,201,	0,1290,
#Partially deleted in new
chr11	64989485	64997018	chr11:64989485-64997018	0	-	64989485	64996914	789624	3	324,102,143,	0,4962,7390,
#Partially deleted in new
chr11	65014112	65022184	chr11:65014112-65022184	3	+	65014207	65021855	0	5	160,111,163,81,464,	0,4251,4458,6306,7608,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	65014170	65019585	chr11:65014170-65019585	0	+	65014170	65014170	8553170	3	102,111,1015,	0,4193,4400,
#Partially deleted in new
chr11	65014179	65022184	chr11:65014179-65022184	1	+	65014207	65021855	0	6	93,111,163,81,168,214,	0,4184,4391,6239,7541,7791,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	65014181	65040570	chr11:65014181-65040570	3	+	65014207	65027320	789624	11	91,111,163,319,36,121,116,148,144,258,885,	0,4182,4389,13136,17986,18249,20665,20877,21338,24390,25504,
#Partially deleted in new
chr11	65014191	65022160	chr11:65014191-65022160	1	+	65014207	65021855	0	4	81,111,163,440,	0,4172,4379,7529,
#Deleted in new
chr11	65018504	65018570	chr11:65018504-65018570	3	+	65018504	65018504	5263520	1	66,	0,
#Partially deleted in new
chr11	65018581	65020547	chr11:65018581-65020547	0	+	65018581	65018581	8553170	2	152,129,	0,1837,
#Deleted in new
chr11	65021515	65022116	chr11:65021515-65022116	0	+	65021515	65021515	8553170	1	601,	0,
#Partially deleted in new
chr11	65025389	65026515	chr11:65025389-65026515	7	-	65025389	65025389	16724991	2	391,409,	0,717,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	65027407	65040572	chr11:65027407-65040572	3	+	65027537	65039792	789624	8	229,36,121,116,148,144,258,887,	0,4760,5023,7439,7651,8112,11164,12278,
#Partially deleted in new
chr11	65027471	65035125	chr11:65027471-65035125	0	+	65027537	65034867	789624	5	165,104,121,116,67,	0,4696,4959,7375,7587,
#Partially deleted in new
chr11	65027485	65035663	chr11:65027485-65035663	0	+	65027537	65035663	789624	6	139,36,121,116,148,144,	0,4682,4945,7361,7573,8034,
#Partially deleted in new
chr11	65027486	65035611	chr11:65027486-65035611	0	+	65027537	65035611	789624	5	150,121,116,148,92,	0,4944,7360,7572,8033,
#Partially deleted in new
chr11	65027537	65039792	chr11:65027537-65039792	1	+	65027537	65039792	789624	7	99,36,121,116,148,144,107,	0,4630,4893,7309,7521,7982,12148,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	65027539	65040570	chr11:65027539-65040570	0	+	65027539	65027539	8553170	7	97,36,121,116,148,3310,885,	0,4628,4891,7307,7519,7980,12146,
#Partially deleted in new
chr11	65027547	65035124	chr11:65027547-65035124	0	+	65032192	65035124	789624	4	89,36,121,66,	0,4620,4883,7511,
#Partially deleted in new
chr11	65040900	65044799	chr11:65040900-65044799	1	+	65041292	65044727	789624	3	206,581,575,	0,385,3324,
#Partially deleted in new
chr11	65040903	65044827	chr11:65040903-65044827	3	+	65041292	65044727	789624	2	963,603,	0,3321,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	65040940	65044673	chr11:65040940-65044673	0	+	65040940	65040940	8553170	3	166,140,449,	0,2084,3284,
#Partially deleted in new
chr11	65040952	65044828	chr11:65040952-65044828	0	+	65040952	65040952	8553170	2	914,604,	0,3272,
#Partially deleted in new
chr11	65040969	65044828	chr11:65040969-65044828	0	+	65040969	65040969	8553170	2	959,604,	0,3255,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	65041244	65044828	chr11:65041244-65044828	0	+	65041244	65043122	789624	3	622,140,604,	0,1780,2980,
#Partially deleted in new
chr11	65044817	65047732	chr11:65044817-65047732	0	-	65046301	65047732	789624	5	194,93,88,174,86,	0,1004,1209,1371,2829,
#Deleted in new
chr11	65044817	65046264	chr11:65044817-65046264	0	-	65045210	65046264	789624	4	433,93,88,76,	0,1004,1209,1371,
#Partially deleted in new
chr11	65044822	65058549	chr11:65044822-65058549	3	-	65045270	65058521	0	18	635,93,88,174,82,91,92,68,64,86,120,86,105,284,123,122,173,213,	0,999,1204,1366,1622,2652,2824,3158,3329,3477,8395,8668,9427,9632,12548,13052,13255,13514,
#Partially deleted in new
chr11	65045225	65048433	chr11:65045225-65048433	1	-	65045270	65045898	789624	8	232,93,88,174,82,92,64,134,	0,596,801,963,1219,2421,2926,3074,
#Partially deleted in new
chr11	65045235	65058542	chr11:65045235-65058542	0	-	65045235	65045235	8553170	17	222,93,88,174,82,91,92,68,64,86,120,86,125,284,123,122,465,	0,586,791,953,1209,2239,2411,2745,2916,3064,7982,8255,9014,9219,12135,12639,12842,
#Partially deleted in new
chr11	65045235	65058542	chr11:65045235-65058542	0	-	65045235	65045235	8553170	15	222,93,88,174,82,92,68,64,86,359,105,284,123,122,465,	0,586,791,953,1209,2411,2745,2916,3064,7982,9014,9219,12135,12639,12842,
#Partially deleted in new
chr11	65045270	65058521	chr11:65045270-65058521	1	-	65045270	65058521	0	17	187,93,88,174,82,91,92,68,64,86,359,105,284,123,122,173,185,	0,551,756,918,1174,2204,2376,2710,2881,3029,7947,8979,9184,12100,12604,12807,13066,
#Partially deleted in new
chr11	65045270	65058521	chr11:65045270-65058521	1	-	65045270	65058521	0	17	187,93,88,174,82,91,92,68,64,86,120,86,105,284,122,173,185,	0,551,756,918,1174,2204,2376,2710,2881,3029,7947,8220,8979,9184,12604,12807,13066,
#Partially deleted in new
chr11	65045270	65058521	chr11:65045270-65058521	1	-	65045270	65058521	789624	17	187,93,88,174,82,91,92,68,64,86,120,86,284,123,122,173,185,	0,551,756,918,1174,2204,2376,2710,2881,3029,7947,8220,9184,12100,12604,12807,13066,
#Partially deleted in new
chr11	65045303	65047937	chr11:65045303-65047937	0	-	65045303	65045898	789624	5	154,93,88,174,291,	0,518,723,885,2343,
#Partially deleted in new
chr11	65045312	65047886	chr11:65045312-65047886	0	-	65045312	65045898	789624	4	145,93,88,240,	0,509,714,2334,
#Partially deleted in new
chr11	65045350	65048473	chr11:65045350-65048473	0	-	65045350	65045898	789624	9	107,93,88,174,82,92,68,64,174,	0,471,676,838,1094,2296,2630,2801,2949,
#Partially deleted in new
chr11	65045429	65047861	chr11:65045429-65047861	0	-	65045429	65045898	789624	6	28,93,88,174,92,20,	0,392,597,759,2217,2412,
#Deleted in new
chr11	65045447	65046371	chr11:65045447-65046371	0	-	65045447	65045447	8553170	2	667,183,	0,741,
#Partially deleted in new
chr11	65045453	65048483	chr11:65045453-65048483	0	-	65045453	65045898	789624	7	4,93,88,174,92,68,332,	0,368,573,735,2193,2527,2698,
#Partially deleted in new
chr11	65045473	65047856	chr11:65045473-65047856	0	-	65045473	65045473	8553170	2	889,210,	0,2173,
#Partially deleted in new
chr11	65045517	65048457	chr11:65045517-65048457	1	-	65045817	65045898	789624	6	397,88,174,92,64,158,	0,509,671,2129,2634,2782,
#Partially deleted in new
chr11	65045998	65047887	chr11:65045998-65047887	0	-	65045998	65045998	8553170	2	528,241,	0,1648,
#Partially deleted in new
chr11	65046056	65048127	chr11:65046056-65048127	0	-	65046056	65046056	8553170	5	58,338,91,92,25,	0,132,1418,1590,2046,
#Partially deleted in new
chr11	65046259	65047933	chr11:65046259-65047933	0	-	65046259	65047501	789624	4	103,82,91,287,	0,185,1215,1387,
#Partially deleted in new
chr11	65046381	65048468	chr11:65046381-65048468	0	-	65046381	65046381	8553170	4	145,92,68,317,	0,1265,1599,1770,
#Deleted in new
chr11	65047890	65048457	chr11:65047890-65048457	0	-	65047890	65047890	8553170	2	158,306,	0,261,
#Partially deleted in new
chr11	65066299	65079389	chr11:65066299-65079389	0	-	65066325	65079389	789624	6	380,67,99,92,114,37,	0,513,1355,1727,2188,13053,
#Partially deleted in new
chr11	65066364	65079415	chr11:65066364-65079415	0	-	65066364	65079415	789624	7	109,128,67,99,92,114,63,	0,187,448,1290,1662,2123,12988,
#Partially deleted in new
chr11	65068043	65083900	chr11:65068043-65083900	0	-	65068043	65068043	8553170	5	75,114,36,66,272,	0,444,15320,15441,15585,
#Partially deleted in new
chr11	65077451	65084151	chr11:65077451-65084151	3	-	65079106	65083978	789624	6	1736,435,36,66,95,219,	0,1901,5912,6033,6177,6481,
#Partially deleted in new
chr11	65078632	65083531	chr11:65078632-65083531	0	-	65079420	65083531	789624	4	555,197,36,47,	0,720,4731,4852,
#Partially deleted in new
chr11	65079087	65084047	chr11:65079087-65084047	1	-	65079106	65083978	789624	5	700,36,66,95,115,	0,4276,4397,4541,4845,
#Partially deleted in new
chr11	65079131	65084039	chr11:65079131-65084039	0	-	65079131	65079131	8553170	5	56,435,36,66,411,	0,221,4232,4353,4497,
#Partially deleted in new
chr11	65079140	65084164	chr11:65079140-65084164	0	-	65079140	65079140	8553170	5	47,435,187,95,94,	0,212,4223,4488,4930,
#Partially deleted in new
chr11	65079165	65083977	chr11:65079165-65083977	0	-	65083510	65083977	789624	6	22,435,36,66,88,45,	0,187,4198,4319,4463,4767,
#Deleted in new
chr11	65083249	65083896	chr11:65083249-65083896	0	-	65083249	65083249	8553170	2	301,268,	0,379,
#Partially deleted in new
chr11	65084209	65088385	chr11:65084209-65088385	0	+	65084209	65084209	8553170	7	151,110,1494,73,147,118,458,	0,481,905,2510,2718,3106,3718,
#Deleted in new
chr11	65084222	65085012	chr11:65084222-65085012	1	+	65084698	65084896	789624	2	156,322,	0,468,
#Deleted in new
chr11	65084229	65086784	chr11:65084229-65086784	0	+	65084698	65086555	789624	4	149,110,194,65,	0,461,2185,2490,
#Partially deleted in new
chr11	65084234	65088400	chr11:65084234-65088400	3	+	65084698	65088114	789624	8	144,110,112,194,73,147,118,473,	0,456,880,2180,2485,2693,3081,3693,
#Deleted in new
chr11	65084234	65086789	chr11:65084234-65086789	0	+	65084698	65086442	789624	5	144,110,200,194,70,	0,456,880,2180,2485,
#Deleted in new
chr11	65084240	65085864	chr11:65084240-65085864	0	+	65084240	65084240	8553170	3	120,110,750,	0,450,874,
#Partially deleted in new
chr11	65084241	65087011	chr11:65084241-65087011	0	+	65084698	65087011	789624	6	119,110,112,194,73,84,	0,449,873,2173,2478,2686,
#Deleted in new
chr11	65084241	65086439	chr11:65084241-65086439	0	+	65084241	65084241	8553170	3	559,200,25,	0,873,2173,
#Deleted in new
chr11	65084241	65086013	chr11:65084241-65086013	0	+	65084241	65084241	8553170	3	137,110,899,	0,449,873,
#Deleted in new
chr11	65084289	65085003	chr11:65084289-65085003	1	+	65084698	65084896	789624	2	71,313,	0,401,
#Partially deleted in new
chr11	65084328	65086982	chr11:65084328-65086982	0	+	65084698	65086982	789624	6	50,92,112,194,73,55,	0,362,786,2086,2391,2599,
#Partially deleted in new
chr11	65084518	65087068	chr11:65084518-65087068	0	+	65084698	65087068	789624	5	282,112,194,73,141,	0,596,1896,2201,2409,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	65084978	65089107	chr11:65084978-65089107	0	-	65084978	65084978	8553170	1	4129,	0,
#Deleted in new
chr11	65085152	65086789	chr11:65085152-65086789	0	+	65085152	65086789	789624	2	74,84,	0,1553,
#Partially deleted in new
chr11	65085286	65087410	chr11:65085286-65087410	0	+	65085286	65085318	789624	4	98,73,147,95,	0,1433,1641,2029,
#Partially deleted in new
chr11	65086338	65087416	chr11:65086338-65087416	0	+	65086338	65086338	8553170	4	270,73,147,101,	0,381,589,977,
#Deleted in new
chr11	65088371	65089070	chr11:65088371-65089070	0	-	65088371	65088371	8553170	2	379,213,	0,486,
#Deleted in new
chr11	65088371	65089025	chr11:65088371-65089025	0	-	65088428	65089025	789624	3	160,68,168,	0,311,486,
#Deleted in new
chr11	65088371	65089091	chr11:65088371-65089091	3	-	65088454	65089031	789624	3	160,100,234,	0,279,486,
#Deleted in new
chr11	65088374	65089091	chr11:65088374-65089091	0	-	65088374	65089031	789624	2	157,234,	0,483,
#Deleted in new
chr11	65088486	65089375	chr11:65088486-65089375	0	-	65088486	65089031	789624	4	45,100,226,65,	0,164,371,824,
#Partially deleted in new
chr11	65089323	65107628	chr11:65089323-65107628	0	+	65090475	65107628	789624	5	159,129,257,130,48,	0,1084,6898,7674,18257,
#Partially deleted in new
chr11	65096114	65108319	chr11:65096114-65108319	0	+	65096250	65108319	789624	4	364,130,220,123,	0,883,11688,12082,
#Partially deleted in new
chr11	65096158	65111860	chr11:65096158-65111860	3	+	65096250	65111587	0	10	320,130,147,220,718,216,219,122,88,534,	0,839,11422,11644,12038,13121,13546,14323,14535,15168,
#Deleted in new
chr11	65096213	65097158	chr11:65096213-65097158	0	+	65096213	65096213	8553170	2	265,161,	0,784,
#Partially deleted in new
chr11	65096226	65108399	chr11:65096226-65108399	0	+	65096250	65108399	789624	4	252,130,442,203,	0,771,11354,11970,
#Partially deleted in new
chr11	65096226	65107727	chr11:65096226-65107727	0	+	65096226	65096226	8553170	3	252,130,541,	0,771,10960,
#Partially deleted in new
chr11	65096226	65108350	chr11:65096226-65108350	0	+	65096250	65107320	789624	6	252,130,186,147,220,154,	0,771,10960,11354,11576,11970,
#Partially deleted in new
chr11	65096243	65108020	chr11:65096243-65108020	0	+	65096250	65107598	789624	3	235,147,218,	0,11337,11559,
#Deleted in new
chr11	65096250	65096782	chr11:65096250-65096782	1	+	65096250	65096782	789624	2	230,13,	0,519,
#Partially deleted in new
chr11	65096478	65107885	chr11:65096478-65107885	0	+	65097027	65107885	789624	4	174,130,147,83,	0,519,11102,11324,
#Partially deleted in new
chr11	65096752	65108494	chr11:65096752-65108494	0	+	65097027	65108494	789624	5	59,130,147,220,298,	0,245,10828,11050,11444,
#Partially deleted in new
chr11	65105407	65111707	chr11:65105407-65111707	0	+	65105407	65105407	8553170	9	33,147,220,718,216,219,122,88,381,	0,2173,2395,2789,3872,4297,5074,5286,5919,
#Partially deleted in new
chr11	65109054	65109857	chr11:65109054-65109857	0	+	65109054	65109054	8553170	2	441,153,	0,650,
#Partially deleted in new
chr11	65109290	65111674	chr11:65109290-65111674	0	+	65109290	65109507	789624	5	301,219,122,88,348,	0,414,1191,1403,2036,
#Partially deleted in new
chr11	65109317	65111664	chr11:65109317-65111664	0	+	65109317	65109317	8553170	4	178,899,88,338,	0,387,1376,2009,
#Partially deleted in new
chr11	65109343	65110891	chr11:65109343-65110891	0	+	65109343	65110799	789624	4	152,219,122,198,	0,361,1138,1350,
#Partially deleted in new
chr11	65110481	65111672	chr11:65110481-65111672	0	+	65110481	65111339	789624	4	122,88,77,346,	0,212,679,845,
#Partially deleted in new
chr11	65110713	65111695	chr11:65110713-65111695	3	-	65110713	65110713	8553170	2	135,409,	0,573,
#Partially deleted in new
chr11	65111844	65115514	chr11:65111844-65115514	0	+	65112015	65115514	789624	6	223,197,120,169,81,39,	0,670,2868,3068,3469,3631,
#Partially deleted in new
chr11	65111853	65116356	chr11:65111853-65116356	3	+	65112015	65116053	789624	10	214,197,55,195,104,120,169,81,123,464,	0,661,957,1366,1637,2859,3059,3460,3622,4039,
#Partially deleted in new
chr11	65111866	65114946	chr11:65111866-65114946	0	+	65112549	65114946	789624	7	24,197,55,195,104,120,34,	0,648,944,1353,1624,2846,3046,
#Partially deleted in new
chr11	65111871	65114857	chr11:65111871-65114857	0	+	65111871	65111871	8553170	3	196,197,189,	0,643,2797,
#Partially deleted in new
chr11	65111871	65115390	chr11:65111871-65115390	0	+	65111871	65111871	8553170	6	196,197,604,104,369,77,	0,643,939,1619,2841,3442,
#Partially deleted in new
chr11	65111871	65115394	chr11:65111871-65115394	0	+	65112015	65115394	789624	7	196,197,46,104,120,169,81,	0,643,1497,1619,2841,3041,3442,
#Partially deleted in new
chr11	65111874	65113082	chr11:65111874-65113082	0	+	65111874	65111874	8553170	3	193,172,121,	0,640,1087,
#Partially deleted in new
chr11	65111877	65116384	chr11:65111877-65116384	0	+	65112015	65113240	789624	9	190,197,195,104,120,169,81,123,492,	0,637,1342,1613,2835,3035,3436,3598,4015,
#Partially deleted in new
chr11	65111878	65115384	chr11:65111878-65115384	0	+	65112549	65115384	789624	8	103,197,55,195,104,120,169,71,	0,636,932,1341,1612,2834,3034,3435,
#Partially deleted in new
chr11	65111883	65116235	chr11:65111883-65116235	1	+	65112015	65116053	789624	9	184,197,55,195,104,120,169,123,343,	0,631,927,1336,1607,2829,3029,3592,4009,
#Partially deleted in new
chr11	65111885	65115598	chr11:65111885-65115598	0	+	65112549	65115598	789624	8	96,197,55,104,120,169,81,123,	0,629,925,1605,2827,3027,3428,3590,
#Partially deleted in new
chr11	65111888	65116273	chr11:65111888-65116273	0	+	65112015	65114816	789624	8	179,197,55,120,169,81,123,381,	0,626,922,2824,3024,3425,3587,4004,
#Partially deleted in new
chr11	65111889	65114765	chr11:65111889-65114765	0	+	65112015	65114765	789624	6	178,197,55,195,71,53,	0,625,921,1330,1634,2823,
#Partially deleted in new
chr11	65111890	65115081	chr11:65111890-65115081	0	+	65112015	65115081	789624	4	177,104,120,169,	0,1600,2822,3022,
#Partially deleted in new
chr11	65111901	65116230	chr11:65111901-65116230	0	+	65111901	65111901	8553170	8	964,195,104,120,169,81,123,338,	0,1318,1589,2811,3011,3412,3574,3991,
#Partially deleted in new
chr11	65111997	65113533	chr11:65111997-65113533	0	+	65112015	65113533	789624	4	70,197,55,43,	0,517,813,1493,
#Partially deleted in new
chr11	65112047	65115035	chr11:65112047-65115035	0	+	65112047	65112873	789624	7	20,197,84,195,104,120,123,	0,467,763,1172,1443,2665,2865,
#Partially deleted in new
chr11	65112270	65113414	chr11:65112270-65113414	0	+	65112270	65112270	8553170	3	441,55,195,	0,540,949,
#Partially deleted in new
chr11	65112643	65115004	chr11:65112643-65115004	0	+	65112643	65112643	8553170	5	68,55,195,120,92,	0,167,576,2069,2269,
#Partially deleted in new
chr11	65112704	65115550	chr11:65112704-65115550	0	+	65112704	65112704	8553170	7	161,46,104,120,169,81,75,	0,664,786,2008,2208,2609,2771,
#Partially deleted in new
chr11	65112738	65114832	chr11:65112738-65114832	0	+	65112738	65112738	8553170	2	856,120,	0,1974,
#Partially deleted in new
chr11	65113213	65113782	chr11:65113213-65113782	0	+	65113213	65113213	8553170	2	201,292,	0,277,
#Partially deleted in new
chr11	65113370	65115436	chr11:65113370-65115436	0	+	65113370	65113370	8553170	5	44,104,120,169,123,	0,120,1342,1542,1943,
#Partially deleted in new
chr11	65113495	65115967	chr11:65113495-65115967	0	+	65113495	65115967	789624	5	99,120,169,81,75,	0,1217,1417,1818,2397,
#Partially deleted in new
chr11	65113508	65115957	chr11:65113508-65115957	0	+	65113508	65115821	789624	7	86,120,169,81,123,48,65,	0,1204,1404,1805,1967,2266,2384,
#Partially deleted in new
chr11	65113549	65116209	chr11:65113549-65116209	0	+	65113549	65113549	8553170	4	45,120,686,317,	0,1163,1363,2343,
#Partially deleted in new
chr11	65116402	65117708	chr11:65116402-65117708	3	-	65116441	65117653	0	1	1306,	0,
#Partially deleted in new
chr11	65116599	65117673	chr11:65116599-65117673	0	-	65116599	65117653	789624	2	412,167,	0,907,
#Partially deleted in new
chr11	65117156	65117458	chr11:65117156-65117458	3	+	65117156	65117156	8553170	2	88,87,	0,215,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	65118309	65119111	chr11:65118309-65119111	3	+	65118309	65118309	8553170	1	802,	0,
#Partially deleted in new
chr11	65120627	65122473	chr11:65120627-65122473	3	-	65120680	65121813	789624	5	179,56,145,83,384,	0,353,872,1111,1462,
#Partially deleted in new
chr11	65120629	65122057	chr11:65120629-65122057	1	-	65120680	65121813	789624	4	177,56,145,319,	0,351,870,1109,
#Partially deleted in new
chr11	65120630	65121821	chr11:65120630-65121821	1	-	65120680	65121813	0	4	176,56,40,83,	0,350,869,1108,
#Partially deleted in new
chr11	65120630	65122113	chr11:65120630-65122113	1	-	65120680	65121813	789624	5	176,56,145,83,78,	0,350,869,1108,1405,
#Partially deleted in new
chr11	65120633	65122117	chr11:65120633-65122117	0	-	65120633	65120633	8553170	1	1484,	0,
#Partially deleted in new
chr11	65120637	65122153	chr11:65120637-65122153	1	-	65120762	65121813	789624	4	169,145,83,64,	0,862,1101,1452,
#Partially deleted in new
chr11	65120696	65121915	chr11:65120696-65121915	1	-	65121491	65121813	789624	2	948,177,	0,1042,
#Partially deleted in new
chr11	65120756	65122113	chr11:65120756-65122113	0	-	65120756	65121813	789624	5	50,56,145,83,173,	0,224,743,982,1184,
#Partially deleted in new
chr11	65121282	65122177	chr11:65121282-65122177	1	-	65121491	65121813	789624	3	362,83,88,	0,456,807,
#Partially deleted in new
chr11	65121779	65129986	chr11:65121779-65129986	0	-	65121779	65121779	8553170	3	42,356,258,	0,310,7949,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	65122182	65127356	chr11:65122182-65127356	0	+	65122182	65122182	789624	4	158,151,125,1631,	0,2319,3305,3543,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	65122290	65126302	chr11:65122290-65126302	0	+	65122290	65122290	8553170	3	50,125,577,	0,3197,3435,
#Partially deleted in new
chr11	65122310	65126004	chr11:65122310-65126004	1	+	65122346	65125580	789624	3	114,125,279,	0,3177,3415,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	65122318	65127363	chr11:65122318-65127363	0	+	65122346	65125872	0	5	106,151,125,217,1307,	0,2183,3169,3407,3738,
#Partially deleted in new
chr11	65122320	65125733	chr11:65122320-65125733	1	+	65122346	65125681	789624	3	104,151,246,	0,2181,3167,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	65122327	65127371	chr11:65122327-65127371	3	+	65122346	65125872	0	4	97,151,125,1646,	0,2174,3160,3398,
#Partially deleted in new
chr11	65122335	65127250	chr11:65122335-65127250	1	+	65122346	65127072	789624	3	89,151,249,	0,2166,4666,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	65122354	65126178	chr11:65122354-65126178	0	+	65122354	65125872	789624	3	110,125,453,	0,3133,3371,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	65124724	65127363	chr11:65124724-65127363	0	+	65124724	65124724	8553170	2	888,1638,	0,1001,
#Partially deleted in new
chr11	65127278	65134532	chr11:65127278-65134532	3	-	65128381	65133601	789624	16	1210,152,187,171,129,164,117,66,100,127,104,49,153,93,149,77,	0,1284,2450,2723,2972,3381,3641,3853,3995,4191,4969,5453,5643,5881,6191,7177,
#Partially deleted in new
chr11	65127278	65134533	chr11:65127278-65134533	1	-	65128381	65133601	789624	16	1210,152,187,174,129,164,117,66,100,127,104,49,153,93,149,78,	0,1284,2450,2723,2972,3381,3641,3853,3995,4191,4969,5453,5643,5881,6191,7177,
#Partially deleted in new
chr11	65127280	65134480	chr11:65127280-65134480	1	-	65128381	65133601	789624	14	1208,152,187,171,129,164,117,66,100,127,153,93,149,25,	0,1282,2448,2721,2970,3379,3639,3851,3993,4189,5641,5879,6189,7175,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	65127280	65134487	chr11:65127280-65134487	0	-	65127280	65127280	8553170	12	2635,378,164,117,66,100,127,533,153,93,149,32,	0,2721,3379,3639,3851,3993,4189,4967,5641,5879,6189,7175,
#Partially deleted in new
chr11	65127281	65134429	chr11:65127281-65134429	1	-	65128381	65133601	789624	16	1207,152,187,171,129,164,117,66,100,127,104,49,153,93,149,176,	0,1281,2447,2720,2969,3378,3638,3850,3992,4188,4966,5450,5640,5878,6188,6972,
#Partially deleted in new
chr11	65128671	65130289	chr11:65128671-65130289	0	-	65128671	65128671	8553170	4	119,187,171,39,	0,1057,1330,1579,
#Partially deleted in new
chr11	65129915	65129978	chr11:65129915-65129978	3	-	65129915	65129915	5263520	1	63,	0,
#Partially deleted in new
chr11	65130727	65132341	chr11:65130727-65132341	0	-	65130727	65130727	8553170	6	74,117,66,100,127,94,	0,192,404,546,742,1520,
#Partially deleted in new
chr11	65130970	65133320	chr11:65130970-65133320	0	-	65130970	65133204	789624	8	66,66,100,127,104,49,153,161,	0,161,303,499,1277,1761,1951,2189,
#Partially deleted in new
chr11	65130994	65133548	chr11:65130994-65133548	0	-	65131522	65133548	789624	8	42,66,100,127,49,153,93,79,	0,137,279,475,1737,1927,2165,2475,
#Partially deleted in new
chr11	65131131	65133616	chr11:65131131-65133616	0	-	65132285	65133601	789624	8	66,100,127,61,49,153,93,147,	0,142,338,1116,1600,1790,2028,2338,
#Partially deleted in new
chr11	65131131	65133324	chr11:65131131-65133324	0	-	65131131	65131131	8553170	5	66,323,104,153,165,	0,142,1116,1790,2028,
#Partially deleted in new
chr11	65131273	65134500	chr11:65131273-65134500	0	-	65131273	65133601	789624	8	100,127,104,49,153,48,149,45,	0,196,974,1458,1648,1886,2196,3182,
#Partially deleted in new
chr11	65132626	65133327	chr11:65132626-65133327	0	-	65132626	65132626	8553170	3	154,153,168,	0,295,533,
#Partially deleted in new
chr11	65132694	65133320	chr11:65132694-65133320	0	-	65132694	65132694	8553170	2	86,399,	0,227,
#Deleted in new
chr11	65145690	65145972	chr11:65145690-65145972	7	-	65145690	65145690	16724991	1	282,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	65147583	65147778	chr11:65147583-65147778	3	+	65147583	65147583	8553170	1	195,	0,
#Partially deleted in new
chr11	65160193	65160382	chr11:65160193-65160382	7	-	65160193	65160193	16724991	1	189,	0,
#Partially deleted in new
chr11	65170153	65173244	chr11:65170153-65173244	3	+	65170235	65173217	789624	7	108,173,59,86,172,331,62,	0,1173,1789,2092,2280,2530,3029,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	65174116	65176470	chr11:65174116-65176470	7	-	65174116	65174116	16724991	1	2354,	0,
#Deleted in new
chr11	65175034	65175487	chr11:65175034-65175487	5	-	65175034	65175034	16724991	1	453,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	65180020	65181834	chr11:65180020-65181834	3	-	65180020	65180020	789624	2	1052,610,	0,1204,
#Partially deleted in new
chr11	65180565	65185950	chr11:65180565-65185950	0	+	65182701	65185950	789624	5	80,268,70,119,34,	0,2135,2562,2908,5351,
#Partially deleted in new
chr11	65181036	65186033	chr11:65181036-65186033	0	+	65182701	65186033	789624	5	19,268,70,119,117,	0,1664,2091,2437,4880,
#Partially deleted in new
chr11	65181193	65212006	chr11:65181193-65212006	3	+	65182701	65211286	0	22	217,268,70,119,134,169,84,86,75,161,176,12,212,40,66,58,65,69,79,117,59,747,	0,1507,1934,2280,4723,4976,6021,6761,7220,7392,23489,24516,25269,25586,26861,27011,28129,28655,28824,29142,29620,30066,
#Partially deleted in new
chr11	65181686	65185945	chr11:65181686-65185945	0	+	65182701	65185945	789624	5	96,268,70,119,29,	0,1014,1441,1787,4230,
#Partially deleted in new
chr11	65181722	65185945	chr11:65181722-65185945	0	+	65182701	65185945	789624	5	64,268,70,119,29,	0,978,1405,1751,4194,
#Partially deleted in new
chr11	65181732	65211858	chr11:65181732-65211858	1	+	65182701	65211286	0	22	74,268,70,119,134,169,84,86,75,161,176,12,212,40,66,58,65,69,79,117,59,599,	0,968,1395,1741,4184,4437,5482,6222,6681,6853,22950,23977,24730,25047,26322,26472,27590,28116,28285,28603,29081,29527,
#Partially deleted in new
chr11	65181744	65212001	chr11:65181744-65212001	1	+	65182701	65211286	0	22	99,268,70,119,134,169,84,86,75,161,176,12,212,40,66,58,65,69,79,117,59,742,	0,956,1383,1729,4172,4425,5470,6210,6669,6841,22938,23965,24718,25035,26310,26460,27578,28104,28273,28591,29069,29515,
#Deleted in new
chr11	65181799	65183668	chr11:65181799-65183668	0	+	65181799	65181799	8553170	4	44,268,70,195,	0,901,1328,1674,
#Partially deleted in new
chr11	65181871	65212005	chr11:65181871-65212005	1	+	65182701	65211286	0	22	142,268,70,119,134,169,84,86,75,161,176,12,212,40,66,58,65,69,79,117,59,746,	0,829,1256,1602,4045,4298,5343,6083,6542,6714,22811,23838,24591,24908,26183,26333,27451,27977,28146,28464,28942,29388,
#Deleted in new
chr11	65181918	65183582	chr11:65181918-65183582	0	+	65181918	65181918	8553170	4	95,67,70,109,	0,983,1209,1555,
#Partially deleted in new
chr11	65181930	65186004	chr11:65181930-65186004	0	+	65181930	65181930	8553170	4	83,268,119,88,	0,770,1543,3986,
#Deleted in new
chr11	65181930	65182890	chr11:65181930-65182890	0	+	65182701	65182890	789624	2	378,190,	0,770,
#Partially deleted in new
chr11	65181933	65185937	chr11:65181933-65185937	0	+	65181933	65181933	8553170	5	80,268,70,119,47,	0,767,1194,1540,3957,
#Deleted in new
chr11	65181937	65183543	chr11:65181937-65183543	0	+	65182701	65183543	789624	5	76,97,268,70,70,	0,446,763,1190,1536,
#Partially deleted in new
chr11	65181999	65188019	chr11:65181999-65188019	0	+	65182701	65187230	789624	7	14,268,70,119,134,84,65,	0,701,1128,1474,3917,5215,5955,
#Deleted in new
chr11	65182434	65183592	chr11:65182434-65183592	0	+	65182701	65183592	789624	4	107,268,70,119,	0,266,693,1039,
#Deleted in new
chr11	65182434	65183503	chr11:65182434-65183503	0	+	65182701	65183503	789624	4	128,268,70,30,	0,266,693,1039,
#Deleted in new
chr11	65182452	65183581	chr11:65182452-65183581	0	+	65182701	65183581	789624	4	127,268,70,108,	0,248,675,1021,
#Partially deleted in new
chr11	65182461	65211987	chr11:65182461-65211987	1	+	65182701	65211286	0	21	507,70,119,134,169,84,86,75,161,176,12,212,40,66,58,65,69,79,117,59,728,	0,666,1012,3455,3708,4753,5493,5952,6124,22221,23248,24001,24318,25593,25743,26861,27387,27556,27874,28352,28798,
#Partially deleted in new
chr11	65183335	65188000	chr11:65183335-65188000	0	+	65183451	65188000	789624	5	257,134,169,84,46,	0,2581,2834,3879,4619,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	65185931	65187686	chr11:65185931-65187686	0	+	65185931	65185931	8553170	2	407,472,	0,1283,
#Partially deleted in new
chr11	65187940	65206075	chr11:65187940-65206075	0	+	65187940	65187940	8553170	5	100,75,161,176,366,	0,473,645,16742,17769,
#Deleted in new
chr11	65188244	65188689	chr11:65188244-65188689	0	+	65188244	65188244	8553170	2	244,104,	0,341,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	65203371	65206669	chr11:65203371-65206669	0	+	65203371	65203371	8553170	5	83,94,176,12,207,	0,173,1311,2338,3091,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	65206256	65209383	chr11:65206256-65209383	0	+	65206256	65206256	8553170	5	418,40,66,58,61,	0,523,1798,1948,3066,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	65208477	65212005	chr11:65208477-65212005	0	+	65208477	65208477	8553170	4	1440,79,117,1192,	0,1540,1858,2336,
#Deleted in new
chr11	65208949	65210392	chr11:65208949-65210392	0	+	65208949	65208949	8553170	4	438,69,79,57,	0,899,1068,1386,
#Deleted in new
chr11	65209143	65212006	chr11:65209143-65212006	0	+	65209143	65209143	8553170	5	244,248,117,59,747,	0,705,1192,1670,2116,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	65213839	65242757	chr11:65213839-65242757	7	+	65213839	65213839	16724991	11	414,104,154,169,124,116,215,109,204,819,768,	0,486,3695,7156,8633,9625,19310,22569,22845,24822,28150,
#Partially deleted in new
chr11	65213847	65226040	chr11:65213847-65226040	4	+	65213847	65213847	16724991	6	406,104,154,124,116,515,	0,478,3687,8625,9617,11678,
#Partially deleted in new
chr11	65213872	65242086	chr11:65213872-65242086	5	+	65213872	65213872	16724991	10	381,104,154,169,124,116,215,109,204,97,	0,453,3662,7123,8600,9592,19277,22536,22812,28117,
#Partially deleted in new
chr11	65213875	65242355	chr11:65213875-65242355	4	+	65213875	65213875	16724991	10	378,104,154,169,124,116,215,109,204,366,	0,450,3659,7120,8597,9589,19274,22533,22809,28114,
#Partially deleted in new
chr11	65221160	65223852	chr11:65221160-65223852	4	+	65221160	65221160	16724991	3	4,124,388,	0,1312,2304,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr11	65261761	65298685	chr11:65261761-65298685	3	+	65262292	65297269	0	18	610,125,92,58,107,194,89,156,63,43,125,39,74,109,107,60,127,1566,	0,4820,5715,6910,14130,16968,17776,19230,19908,20717,25954,27288,28037,32391,32784,33778,34102,35358,
#Partially deleted in new
chr11	65261919	65296498	chr11:65261919-65296498	0	+	65262292	65267511	789624	16	452,92,58,107,194,89,156,63,43,125,39,74,109,107,60,635,	0,5557,6752,13972,16810,17618,19072,19750,20559,25796,27130,27879,32233,32626,33620,33944,
#Partially deleted in new
chr11	65261927	65326543	chr11:65261927-65326543	3	+	65262292	65320572	8553170	20	444,125,92,58,107,194,89,156,63,43,125,39,74,109,107,60,127,70,2018,156,	0,4654,5549,6744,13964,16802,17610,19064,19742,20551,25788,27122,27871,32225,32618,33612,33936,56986,58616,64460,
#Partially deleted in new
chr11	65261931	65280020	chr11:65261931-65280020	0	+	65261931	65261931	8553170	7	440,125,92,58,107,194,483,	0,4650,5545,6740,13960,16798,17606,
#Partially deleted in new
chr11	65266480	65278826	chr11:65266480-65278826	0	+	65266622	65278826	789624	5	226,92,58,107,97,	0,996,2191,9411,12249,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	65280467	65297616	chr11:65280467-65297616	0	+	65280467	65280467	8553170	11	680,63,43,125,39,74,109,107,60,127,497,	0,1202,2011,7248,8582,9331,13685,14078,15072,15396,16652,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	65282506	65305589	chr11:65282506-65305589	0	+	65282506	65305501	789624	9	15,125,39,74,109,107,60,127,217,	0,5209,6543,7292,11646,12039,13033,13357,22866,
#Partially deleted in new
chr11	65287601	65294776	chr11:65287601-65294776	0	+	65287601	65287601	8553170	5	239,39,74,109,231,	0,1448,2197,6551,6944,
#Partially deleted in new
chr11	65294177	65297552	chr11:65294177-65297552	0	+	65294177	65294177	8553170	5	84,107,60,57,433,	0,368,1362,1756,2942,
#Partially deleted in new
chr11	65314817	65322429	chr11:65314817-65322429	3	+	65320898	65321531	789624	2	137,1886,	0,5726,
#Partially deleted in new
chr11	65317041	65321621	chr11:65317041-65321621	1	+	65320898	65321531	789624	2	201,1078,	0,3502,
#Partially deleted in new
chr11	65333753	65353249	chr11:65333753-65353249	3	+	65333886	65351759	0	11	165,161,108,164,93,79,138,129,113,82,1567,	0,6631,7212,7645,9991,10237,11912,12176,12493,15096,17929,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	65333851	65342002	chr11:65333851-65342002	0	+	65333851	65333851	8553170	4	67,161,108,604,	0,6533,7114,7547,
#Partially deleted in new
chr11	65333854	65353188	chr11:65333854-65353188	1	+	65333886	65351759	0	6	64,161,108,164,82,1506,	0,6530,7111,7544,14995,17828,
#Partially deleted in new
chr11	65333861	65345746	chr11:65333861-65345746	0	+	65333861	65333861	8553170	7	57,108,164,93,79,42,81,	0,7104,7537,9883,10129,10718,11804,
#Partially deleted in new
chr11	65333866	65352983	chr11:65333866-65352983	1	+	65333886	65351759	789624	12	52,161,108,164,93,79,42,138,129,113,82,1301,	0,6518,7099,7532,9878,10124,10713,11799,12063,12380,14983,17816,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	65333872	65352981	chr11:65333872-65352981	0	+	65333872	65333872	8553170	7	46,108,164,83,138,3002,1299,	0,7093,7526,9882,11793,12057,17810,
#Partially deleted in new
chr11	65333874	65346029	chr11:65333874-65346029	0	+	65333874	65333874	8553170	7	44,108,164,93,79,138,100,	0,7091,7524,9870,10116,11791,12055,
#Partially deleted in new
chr11	65333876	65345706	chr11:65333876-65345706	0	+	65333886	65343764	789624	6	42,161,108,93,79,41,	0,6508,7089,9868,10114,11789,
#Partially deleted in new
chr11	65341486	65346119	chr11:65341486-65346119	0	+	65341486	65341486	8553170	4	76,93,79,454,	0,2258,2504,4179,
#Partially deleted in new
chr11	65343504	65344095	chr11:65343504-65344095	0	+	65343504	65343504	8553170	2	333,105,	0,486,
#Partially deleted in new
chr11	65344259	65352979	chr11:65344259-65352979	0	+	65344259	65344259	8553170	5	1544,129,113,82,1297,	0,1670,1987,4590,7423,
#Partially deleted in new
chr11	65345740	65352981	chr11:65345740-65352981	0	+	65345740	65351759	789624	4	63,129,82,1299,	0,189,3109,5942,
#Deleted in new
chr11	65354766	65357613	chr11:65354766-65357613	3	+	65355808	65357224	789624	2	191,1821,	0,1026,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	65367437	65375299	chr11:65367437-65375299	3	+	65367437	65367437	8553170	3	378,117,69,	0,489,7793,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	65375191	65382671	chr11:65375191-65382671	3	-	65376406	65381951	789624	7	1484,259,186,72,44,55,186,	0,1626,4184,4675,4940,6723,7294,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	65375191	65382007	chr11:65375191-65382007	1	-	65376406	65381951	789624	6	1484,259,186,72,44,93,	0,1626,4184,4675,4940,6723,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	65375191	65382373	chr11:65375191-65382373	1	-	65376406	65381951	789624	5	1484,259,186,44,459,	0,1626,4184,4940,6723,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	65375191	65378025	chr11:65375191-65378025	0	-	65375191	65375191	8553170	3	705,140,1208,	0,1344,1626,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	65375193	65382638	chr11:65375193-65382638	1	-	65376406	65379893	789624	6	1482,259,186,72,44,153,	0,1624,4182,4673,4938,7292,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	65375193	65382646	chr11:65375193-65382646	0	-	65375193	65375193	8553170	3	1482,3121,2515,	0,1624,4938,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	65375194	65383701	chr11:65375194-65383701	0	-	65380565	65381951	789624	10	1481,259,186,72,103,99,95,86,323,384,	0,1623,4181,4672,4937,5339,6680,7291,7530,8123,
#Partially deleted in new
chr11	65376193	65381951	chr11:65376193-65381951	1	-	65376406	65381951	789624	5	482,259,72,44,37,	0,624,3673,3938,5721,
#Partially deleted in new
chr11	65376556	65382631	chr11:65376556-65382631	0	-	65380141	65381951	789624	8	119,259,91,186,72,44,95,146,	0,261,776,2819,3310,3575,5318,5929,
#Partially deleted in new
chr11	65376910	65381978	chr11:65376910-65381978	0	-	65380141	65381951	789624	5	166,186,72,44,104,	0,2465,2956,3221,4964,
#Partially deleted in new
chr11	65377061	65382674	chr11:65377061-65382674	0	-	65377061	65381951	789624	6	15,186,72,44,55,189,	0,2314,2805,3070,4853,5424,
#Partially deleted in new
chr11	65379452	65382645	chr11:65379452-65382645	0	-	65380546	65381951	789624	6	109,72,44,89,95,160,	0,414,679,1081,2422,3033,
#Partially deleted in new
chr11	65379456	65382673	chr11:65379456-65382673	0	-	65380565	65381951	789624	6	105,72,44,99,95,188,	0,410,675,1077,2418,3029,
#Deleted in new
chr11	65379457	65380989	chr11:65379457-65380989	0	-	65379457	65379457	8553170	4	104,72,44,456,	0,409,674,1076,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	65381587	65382642	chr11:65381587-65382642	0	-	65381587	65381587	8553170	2	382,157,	0,898,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	65386598	65413525	chr11:65386598-65413525	3	+	65387036	65411360	789624	11	163,85,168,102,59,167,222,124,144,205,2284,	0,438,2762,6974,7442,7660,10200,13137,14125,18265,24643,
#Deleted in new
chr11	65386620	65387261	chr11:65386620-65387261	1	+	65387036	65387237	789624	2	141,225,	0,416,
#Partially deleted in new
chr11	65386625	65393755	chr11:65386625-65393755	0	+	65386625	65386625	8553170	4	136,85,168,183,	0,411,2735,6947,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	65386636	65413522	chr11:65386636-65413522	1	+	65387036	65411360	789624	10	125,85,102,59,167,222,124,144,205,2281,	0,400,6936,7404,7622,10162,13099,14087,18227,24605,
#Partially deleted in new
chr11	65386636	65396937	chr11:65386636-65396937	0	+	65387036	65396937	789624	6	125,85,102,59,167,139,	0,400,6936,7404,7622,10162,
#Partially deleted in new
chr11	65386656	65411780	chr11:65386656-65411780	1	+	65387036	65411360	789624	10	105,85,168,59,167,222,124,144,205,539,	0,380,2704,7384,7602,10142,13079,14067,18207,24585,
#Partially deleted in new
chr11	65386659	65396809	chr11:65386659-65396809	0	+	65387036	65396809	789624	6	102,85,144,59,167,11,	0,377,2725,7381,7599,10139,
#Partially deleted in new
chr11	65386927	65393590	chr11:65386927-65393590	0	+	65387036	65393590	789624	3	194,168,18,	0,2433,6645,
#Partially deleted in new
chr11	65394261	65399897	chr11:65394261-65399897	0	+	65394261	65394261	8553170	3	164,222,162,	0,2537,5474,
#Deleted in new
chr11	65422773	65426457	chr11:65422773-65426457	1	+	65422773	65422773	8553170	2	610,2831,	0,853,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	65422797	65445540	chr11:65422797-65445540	1	+	65422797	65422797	789624	1	22743,	0,
#Deleted in new
chr11	65422799	65426405	chr11:65422799-65426405	1	+	65422799	65422799	789624	2	413,3111,	0,495,
#Deleted in new
chr11	65422803	65424404	chr11:65422803-65424404	1	+	65422803	65422803	8553170	3	580,31,442,	0,823,1159,
#Deleted in new
chr11	65423095	65426513	chr11:65423095-65426513	1	+	65423095	65423095	8553170	3	18,89,2887,	0,199,531,
#Deleted in new
chr11	65423124	65426499	chr11:65423124-65426499	1	+	65423124	65423124	8553170	2	95,3205,	0,170,
#Deleted in new
chr11	65423272	65423392	chr11:65423272-65423392	3	+	65423272	65423272	8553170	1	120,	0,
#Deleted in new
chr11	65423538	65424967	chr11:65423538-65424967	1	+	65423538	65423538	8553170	2	140,1005,	0,424,
#Deleted in new
chr11	65423637	65423742	chr11:65423637-65423742	3	+	65423637	65423637	8553170	1	105,	0,
#Deleted in new
chr11	65423959	65424118	chr11:65423959-65424118	3	+	65423959	65423959	8553170	1	159,	0,
#Deleted in new
chr11	65425550	65426385	chr11:65425550-65426385	3	+	65425550	65425550	8553170	2	187,325,	0,510,
#Deleted in new
chr11	65444457	65444557	chr11:65444457-65444557	3	+	65444457	65444457	5263520	1	100,	0,
#Deleted in new
chr11	65445540	65445598	chr11:65445540-65445598	3	+	65445540	65445540	8553170	1	58,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	65455257	65456318	chr11:65455257-65456318	5	+	65455257	65455257	16724991	3	74,145,625,	0,179,436,
#Partially deleted in new
chr11	65455268	65455581	chr11:65455268-65455581	5	+	65455268	65455268	16724991	2	63,145,	0,168,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	65455312	65466720	chr11:65455312-65466720	7	+	65455312	65455312	16724991	3	19,145,636,	0,124,10772,
#Deleted in new
chr11	65487240	65488136	chr11:65487240-65488136	0	-	65487240	65487240	8553170	3	194,95,247,	0,285,649,
#Deleted in new
chr11	65487245	65488228	chr11:65487245-65488228	3	-	65487245	65487245	8553170	3	189,95,343,	0,280,640,
#Deleted in new
chr11	65497687	65506431	chr11:65497687-65506431	3	+	65497687	65497687	8553170	4	178,53,4937,172,	0,994,1281,8572,
#Deleted in new
chr11	65497761	65506469	chr11:65497761-65506469	0	+	65497761	65497761	789624	1	8708,	0,
#Deleted in new
chr11	65498009	65498405	chr11:65498009-65498405	3	-	65498009	65498009	8553170	1	396,	0,
#Deleted in new
chr11	65499041	65500970	chr11:65499041-65500970	0	+	65499041	65499041	8553170	2	421,59,	0,1870,
#Deleted in new
chr11	65499041	65499785	chr11:65499041-65499785	0	+	65499041	65499041	8553170	2	297,97,	0,647,
#Deleted in new
chr11	65499041	65499706	chr11:65499041-65499706	0	+	65499041	65499041	8553170	2	264,88,	0,577,
#Deleted in new
chr11	65500222	65500713	chr11:65500222-65500713	0	+	65500222	65500222	8553170	2	176,177,	0,314,
#Deleted in new
chr11	65501847	65503609	chr11:65501847-65503609	1	+	65501847	65501847	8553170	2	546,973,	0,789,
#Deleted in new
chr11	65501959	65504463	chr11:65501959-65504463	0	+	65501959	65501959	8553170	2	434,138,	0,2366,
#Deleted in new
chr11	65502728	65503760	chr11:65502728-65503760	0	+	65502728	65502728	8553170	2	392,32,	0,1000,
#Deleted in new
chr11	65502913	65503008	chr11:65502913-65503008	3	+	65502913	65502913	8553170	1	95,	0,
#Deleted in new
chr11	65503678	65504463	chr11:65503678-65504463	0	+	65503678	65503678	8553170	3	121,74,138,	0,454,647,
#Deleted in new
chr11	65503704	65504689	chr11:65503704-65504689	1	+	65503704	65503704	8553170	4	95,74,33,32,	0,428,621,953,
#Deleted in new
chr11	65504004	65504848	chr11:65504004-65504848	1	+	65504004	65504004	8553170	2	202,523,	0,321,
#Deleted in new
chr11	65504495	65504851	chr11:65504495-65504851	0	+	65504495	65504495	8553170	2	100,32,	0,324,
#Deleted in new
chr11	65504518	65506468	chr11:65504518-65506468	0	+	65504518	65504518	8553170	2	501,83,	0,1867,
#Deleted in new
chr11	65504837	65506465	chr11:65504837-65506465	1	+	65504837	65504837	8553170	3	441,72,80,	0,753,1548,
#Deleted in new
chr11	65505203	65506469	chr11:65505203-65506469	1	+	65505203	65505203	8553170	3	75,159,84,	0,300,1182,
#Deleted in new
chr11	65505206	65506516	chr11:65505206-65506516	1	+	65505206	65505206	8553170	2	456,131,	0,1179,
#Deleted in new
chr11	65506116	65506173	chr11:65506116-65506173	3	+	65506116	65506116	8553170	1	57,	0,
#Partially deleted in new
chr11	65514402	65514923	chr11:65514402-65514923	7	-	65514402	65514402	16724991	2	168,21,	0,500,
#Partially deleted in new
chr11	65525076	65538704	chr11:65525076-65538704	3	+	65525153	65538566	789624	18	188,141,123,227,91,156,159,108,114,156,189,76,165,143,72,216,55,263,	0,497,844,1047,1706,1885,5552,6499,7615,10150,10876,11182,11509,11909,12732,12890,13193,13365,
#Partially deleted in new
chr11	65525076	65538704	chr11:65525076-65538704	1	+	65525153	65538540	789624	17	188,141,123,227,91,156,159,108,114,156,189,76,165,143,69,216,263,	0,497,844,1047,1706,1885,5552,6499,7615,10150,10876,11182,11509,11909,12735,12890,13365,
#Partially deleted in new
chr11	65525084	65538704	chr11:65525084-65538704	1	+	65525153	65538566	789624	18	180,141,123,227,91,156,159,108,114,156,189,76,165,92,72,216,55,263,	0,489,836,1039,1698,1877,5544,6491,7607,10142,10868,11174,11501,11952,12724,12882,13185,13357,
#Partially deleted in new
chr11	65525111	65538704	chr11:65525111-65538704	1	+	65525153	65538540	789624	18	153,141,123,227,91,156,159,108,114,156,189,76,165,143,72,179,55,263,	0,462,809,1012,1671,1850,5517,6464,7580,10115,10841,11147,11474,11874,12697,12892,13158,13330,
#Partially deleted in new
chr11	65525120	65538704	chr11:65525120-65538704	1	+	65525153	65538350	789624	17	144,141,123,227,91,156,159,108,114,156,189,76,165,143,72,216,435,	0,453,800,1003,1662,1841,5508,6455,7571,10106,10832,11138,11465,11865,12688,12846,13149,
#Partially deleted in new
chr11	65525412	65538675	chr11:65525412-65538675	1	+	65526177	65538566	789624	17	302,123,227,91,156,159,108,114,156,189,76,165,143,72,216,55,234,	0,508,711,1370,1549,5216,6163,7279,9814,10540,10846,11173,11573,12396,12554,12857,13029,
#Partially deleted in new
chr11	65530638	65538701	chr11:65530638-65538701	1	+	65531635	65537094	789624	13	149,108,114,156,189,76,161,6,97,72,216,55,260,	0,937,2053,4588,5314,5620,5947,6385,6393,7170,7328,7631,7803,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	65530766	65533258	chr11:65530766-65533258	0	+	65530766	65530766	8553170	3	21,108,567,	0,809,1925,
#Partially deleted in new
chr11	65532747	65538008	chr11:65532747-65538008	0	+	65532747	65536637	789624	8	58,156,189,76,160,143,72,42,	0,2479,3205,3511,3843,4238,5061,5219,
#Deleted in new
chr11	65535130	65537123	chr11:65535130-65537123	0	+	65535130	65535130	8553170	5	252,189,76,165,138,	0,822,1128,1455,1855,
#Deleted in new
chr11	65535333	65536404	chr11:65535333-65536404	0	+	65535333	65535333	8553170	2	808,146,	0,925,
#Deleted in new
chr11	65535440	65536626	chr11:65535440-65536626	0	+	65535440	65535440	8553170	4	191,189,76,41,	0,512,818,1145,
#Deleted in new
chr11	65536264	65538704	chr11:65536264-65538704	0	+	65536264	65538566	789624	7	70,165,143,69,216,55,263,	0,321,721,1547,1702,2005,2177,
#Deleted in new
chr11	65537830	65538704	chr11:65537830-65538704	0	+	65537830	65537830	8553170	4	50,216,55,258,	0,136,439,616,
#Deleted in new
chr11	65537848	65538704	chr11:65537848-65538704	0	+	65537848	65537848	8553170	1	856,	0,
#Partially deleted in new
chr11	65538804	65557959	chr11:65538804-65557959	1	-	65539079	65557959	789624	27	427,132,81,162,138,129,84,168,129,120,123,123,123,129,132,126,99,73,17,186,159,123,93,106,203,330,331,	0,523,743,915,1440,1681,2066,2321,2795,4300,4622,7637,7993,8634,8885,9115,12321,12597,12743,13167,13443,14055,14359,14620,14896,15246,18824,
#Deleted in new
chr11	65538816	65542038	chr11:65538816-65542038	0	-	65538816	65538816	8553170	10	415,132,81,162,141,138,129,84,168,439,	0,511,731,903,1196,1428,1669,2054,2309,2783,
#Partially deleted in new
chr11	65538817	65558228	chr11:65538817-65558228	3	-	65539079	65557959	789624	28	414,132,81,162,141,138,129,84,168,129,120,123,123,123,129,132,126,99,73,17,186,159,123,93,106,203,330,600,	0,510,730,902,1195,1427,1668,2053,2308,2782,4287,4609,7624,7980,8621,8872,9102,12308,12584,12730,13154,13430,14042,14346,14607,14883,15233,18811,
#Partially deleted in new
chr11	65538818	65546759	chr11:65538818-65546759	1	-	65539079	65540600	789624	12	413,132,81,162,138,129,84,168,129,120,123,318,	0,509,729,901,1426,1667,2052,2307,2781,4286,4608,7623,
#Partially deleted in new
chr11	65538818	65544704	chr11:65538818-65544704	1	-	65539079	65540600	789624	13	413,132,81,162,141,138,129,84,168,129,120,123,641,	0,509,729,901,1194,1426,1667,2052,2307,2781,4286,4608,5245,
#Partially deleted in new
chr11	65538818	65548919	chr11:65538818-65548919	1	-	65539079	65548055	789624	17	413,132,81,162,141,138,129,84,168,129,120,123,123,123,129,132,1000,	0,509,729,901,1194,1426,1667,2052,2307,2781,4286,4608,7623,7979,8620,8871,9101,
#Partially deleted in new
chr11	65538990	65558038	chr11:65538990-65558038	0	-	65554356	65557959	789624	27	241,132,81,162,138,129,84,168,129,120,123,123,123,129,132,126,99,73,17,186,159,123,93,106,203,330,406,	0,337,557,729,1254,1495,1880,2135,2609,4114,4436,7451,7807,8448,8699,8929,12135,12411,12557,12981,13257,13869,14173,14434,14710,15060,18642,
#Partially deleted in new
chr11	65539051	65557765	chr11:65539051-65557765	0	-	65539079	65557765	789624	22	180,132,81,162,138,129,84,168,129,120,123,123,123,129,132,126,99,73,17,186,159,137,	0,276,496,668,1193,1434,1819,2074,2548,4053,4375,7390,7746,8387,8638,8868,12074,12350,12496,12920,13196,18577,
#Deleted in new
chr11	65539194	65540683	chr11:65539194-65540683	0	-	65539194	65540600	789624	6	37,132,81,162,138,198,	0,133,353,525,1050,1291,
#Deleted in new
chr11	65539335	65540452	chr11:65539335-65540452	0	-	65539335	65540248	789624	4	124,81,162,208,	0,212,384,909,
#Partially deleted in new
chr11	65539410	65558930	chr11:65539410-65558930	0	-	65539410	65557692	789624	28	49,81,162,141,138,129,84,168,129,120,123,123,123,129,132,126,99,73,17,186,159,123,93,106,203,330,83,327,	0,137,309,602,834,1075,1460,1715,2189,3694,4016,7031,7387,8028,8279,8509,11715,11991,12137,12561,12837,13449,13753,14014,14290,14640,18218,19193,
#Deleted in new
chr11	65540796	65541620	chr11:65540796-65541620	0	-	65540796	65540796	8553170	3	158,168,21,	0,329,803,
#Deleted in new
chr11	65540994	65541831	chr11:65540994-65541831	0	-	65540994	65540994	8553170	2	299,232,	0,605,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	65542406	65545770	chr11:65542406-65545770	0	-	65542406	65542406	8553170	2	818,2344,	0,1020,
#Partially deleted in new
chr11	65546195	65547565	chr11:65546195-65547565	0	-	65546391	65547565	789624	3	369,123,127,	0,602,1243,
#Partially deleted in new
chr11	65547969	65551779	chr11:65547969-65551779	0	-	65547969	65547969	8553170	3	76,99,378,	0,3156,3432,
#Partially deleted in new
chr11	65548018	65551876	chr11:65548018-65551876	0	-	65548018	65548018	8553170	4	27,99,73,329,	0,3107,3383,3529,
#Deleted in new
chr11	65551511	65552977	chr11:65551511-65552977	0	-	65551511	65551511	8553170	3	646,159,118,	0,736,1348,
#Partially deleted in new
chr11	65551971	65557765	chr11:65551971-65557765	0	-	65553827	65557765	789624	7	186,159,123,93,106,198,137,	0,276,888,1192,1453,1729,5657,
#Deleted in new
chr11	65552111	65553727	chr11:65552111-65553727	0	-	65552111	65553727	789624	5	46,159,93,106,27,	0,136,1052,1313,1589,
#Deleted in new
chr11	65552123	65554140	chr11:65552123-65554140	0	-	65552123	65552123	8553170	5	34,159,123,93,440,	0,124,736,1040,1577,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	65561483	65561607	chr11:65561483-65561607	3	+	65561483	65561483	8553170	1	124,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	65568481	65570423	chr11:65568481-65570423	0	-	65568481	65568481	8553170	1	1942,	0,
#Deleted in new
chr11	65569659	65570273	chr11:65569659-65570273	3	-	65569659	65569659	8553170	1	614,	0,
#Deleted in new
chr11	65570429	65571770	chr11:65570429-65571770	3	+	65570491	65571734	789624	4	81,152,85,380,	0,174,456,961,
#Deleted in new
chr11	65570459	65571888	chr11:65570459-65571888	1	+	65570695	65571734	789624	3	296,85,498,	0,426,931,
#Deleted in new
chr11	65570484	65572892	chr11:65570484-65572892	1	+	65570695	65572480	789624	3	271,85,450,	0,401,1958,
#Deleted in new
chr11	65570486	65571858	chr11:65570486-65571858	1	+	65570491	65571396	789624	4	24,136,85,468,	0,117,399,904,
#Deleted in new
chr11	65570602	65572892	chr11:65570602-65572892	0	+	65570602	65571734	789624	4	153,85,389,450,	0,283,788,1840,
#Deleted in new
chr11	65570681	65573942	chr11:65570681-65573942	0	+	65570681	65573526	789624	3	74,85,580,	0,204,2681,
#Deleted in new
chr11	65570816	65571768	chr11:65570816-65571768	0	+	65570816	65570816	8553170	2	154,378,	0,574,
#Deleted in new
chr11	65572348	65574198	chr11:65572348-65574198	1	+	65572669	65573641	789624	2	612,797,	0,1053,
#Deleted in new
chr11	65572461	65574190	chr11:65572461-65574190	1	+	65572669	65573526	789624	2	499,838,	0,891,
#Deleted in new
chr11	65572527	65574192	chr11:65572527-65574192	3	+	65572669	65573641	789624	2	433,830,	0,835,
#Partially deleted in new
chr11	65576037	65592650	chr11:65576037-65592650	3	+	65576302	65592302	789624	19	369,58,96,54,179,143,69,163,2227,158,49,633,70,56,124,100,74,115,448,	0,3040,3303,3898,4043,4299,5020,5173,5501,8203,8448,8921,13713,13898,14049,14455,15762,15938,16165,
#Partially deleted in new
chr11	65576045	65585417	chr11:65576045-65585417	0	+	65576302	65585417	789624	12	361,58,96,54,179,143,69,163,478,158,49,459,	0,3032,3295,3890,4035,4291,5012,5165,5493,8195,8440,8913,
#Partially deleted in new
chr11	65576061	65585373	chr11:65576061-65585373	0	+	65576302	65585373	789624	12	345,58,96,54,179,143,36,69,41,158,49,415,	0,3016,3279,3874,4019,4275,4866,4996,5149,8179,8424,8897,
#Deleted in new
chr11	65578200	65579380	chr11:65578200-65579380	0	+	65578200	65578200	8553170	3	78,58,40,	0,877,1140,
#Deleted in new
chr11	65581523	65584692	chr11:65581523-65584692	0	+	65581523	65581523	8553170	1	3169,	0,
#Deleted in new
chr11	65581898	65585303	chr11:65581898-65585303	0	+	65581898	65585303	789624	5	67,174,158,49,345,	0,1693,2342,2587,3060,
#Partially deleted in new
chr11	65584294	65592462	chr11:65584294-65592462	0	+	65584294	65584294	8553170	4	104,49,77,260,	0,191,7719,7908,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	65591194	65592478	chr11:65591194-65592478	0	+	65591194	65591194	8553170	3	441,82,276,	0,814,1008,
#Partially deleted in new
chr11	65591388	65592371	chr11:65591388-65592371	0	+	65591388	65591388	8553170	3	485,115,169,	0,587,814,
#Partially deleted in new
chr11	65591807	65592462	chr11:65591807-65592462	0	+	65591807	65591807	8553170	2	283,260,	0,395,
#Partially deleted in new
chr11	65591821	65592480	chr11:65591821-65592480	0	+	65591821	65591821	8553170	3	52,131,278,	0,138,381,
#Partially deleted in new
chr11	65592854	65595996	chr11:65592854-65595996	3	-	65593004	65595772	789624	3	356,399,543,	0,621,2599,
#Partially deleted in new
chr11	65592854	65595808	chr11:65592854-65595808	1	-	65593342	65595772	789624	3	529,399,355,	0,621,2599,
#Partially deleted in new
chr11	65592854	65595996	chr11:65592854-65595996	1	-	65593419	65595772	789624	2	1020,543,	0,2599,
#Partially deleted in new
chr11	65592854	65595996	chr11:65592854-65595996	1	-	65593342	65595772	789624	4	356,74,399,543,	0,455,621,2599,
#Partially deleted in new
chr11	65592865	65593501	chr11:65592865-65593501	0	-	65593004	65593501	789624	2	330,26,	0,610,
#Partially deleted in new
chr11	65592868	65593519	chr11:65592868-65593519	0	-	65593342	65593519	789624	3	327,74,44,	0,441,607,
#Partially deleted in new
chr11	65597754	65614242	chr11:65597754-65614242	3	-	65598290	65613756	0	10	874,375,92,136,114,244,176,149,181,1225,	0,1639,8006,8191,8936,9515,9886,10167,10513,15263,
#Partially deleted in new
chr11	65597755	65611301	chr11:65597755-65611301	1	-	65598290	65608416	0	10	873,375,92,136,114,244,176,149,181,490,	0,1638,8005,8190,8935,9514,9885,10166,10512,13056,
#Partially deleted in new
chr11	65597755	65607026	chr11:65597755-65607026	1	-	65598290	65605839	789624	5	873,375,92,136,336,	0,1638,8005,8190,8935,
#Partially deleted in new
chr11	65597757	65608422	chr11:65597757-65608422	0	-	65606761	65608422	789624	9	817,375,92,136,114,244,57,149,155,	0,1636,8003,8188,8933,9512,9883,10164,10510,
#Partially deleted in new
chr11	65599450	65606758	chr11:65599450-65606758	0	-	65599450	65599450	8553170	5	318,50,92,136,68,	0,6142,6310,6495,7240,
#Deleted in new
chr11	65605721	65606396	chr11:65605721-65606396	0	-	65605721	65605721	8553170	2	131,451,	0,224,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	65606434	65615382	chr11:65606434-65615382	0	-	65606434	65606434	8553170	4	370,244,808,2365,	0,835,1206,6583,
#Deleted in new
chr11	65607164	65607870	chr11:65607164-65607870	0	-	65607164	65607164	8553170	2	349,230,	0,476,
#Deleted in new
chr11	65607705	65608448	chr11:65607705-65608448	0	-	65607705	65607705	8553170	2	365,181,	0,562,
#Partially deleted in new
chr11	65607801	65614249	chr11:65607801-65614249	0	-	65607801	65614012	789624	4	15,149,167,240,	0,120,466,6208,
#Partially deleted in new
chr11	65607929	65614248	chr11:65607929-65614248	0	-	65607929	65608416	789624	3	141,181,239,	0,338,6080,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	65608023	65608805	chr11:65608023-65608805	0	-	65608023	65608023	8553170	2	47,538,	0,244,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	65608631	65614236	chr11:65608631-65614236	0	-	65608631	65608631	8553170	1	5605,	0,
#Partially deleted in new
chr11	65615772	65637439	chr11:65615772-65637439	3	+	65616311	65636978	789624	35	692,188,100,40,96,1128,124,179,91,136,122,154,33,172,111,92,110,106,93,151,145,178,109,130,59,216,254,231,104,148,231,275,134,299,674,	0,1051,1477,1697,1838,2167,3764,3981,4566,5058,6472,7718,8156,8422,8698,9152,9398,9632,9879,10131,11131,11632,12822,13046,13584,13747,14578,18353,18765,19200,19445,19756,20401,20618,20993,
#Deleted in new
chr11	65619857	65622299	chr11:65619857-65622299	0	+	65619857	65619857	8553170	3	75,136,55,	0,973,2387,
#Deleted in new
chr11	65625126	65626779	chr11:65625126-65626779	0	+	65625126	65625126	8553170	4	154,106,93,876,	0,278,525,777,
#Partially deleted in new
chr11	65626852	65637305	chr11:65626852-65637305	0	+	65626852	65626852	8553170	15	196,178,109,130,59,216,254,231,104,148,231,275,134,299,540,	0,552,1742,1966,2504,2667,3498,7273,7685,8120,8365,8676,9321,9538,9913,
#Partially deleted in new
chr11	65630410	65634356	chr11:65630410-65634356	0	+	65630410	65630410	8553170	2	194,278,	0,3668,
#Deleted in new
chr11	65636309	65636369	chr11:65636309-65636369	3	+	65636309	65636309	5263520	1	60,	0,
#Partially deleted in new
chr11	65638096	65650930	chr11:65638096-65650930	3	+	65640921	65650715	789624	16	86,770,128,177,175,104,158,610,275,219,112,109,102,55,79,362,	0,2734,4153,4366,6858,7757,8124,8359,9287,11165,11464,11660,11853,12041,12304,12472,
#Partially deleted in new
chr11	65638151	65640940	chr11:65638151-65640940	0	+	65640921	65640940	8553170	2	269,110,	0,2679,
#Partially deleted in new
chr11	65639865	65650880	chr11:65639865-65650880	1	+	65640921	65650715	789624	17	156,770,128,177,175,104,158,208,96,275,219,112,109,102,55,79,312,	0,965,2384,2597,5089,5988,6355,6590,7104,7518,9396,9695,9891,10084,10272,10535,10703,
#Partially deleted in new
chr11	65640120	65650918	chr11:65640120-65650918	1	+	65640921	65650715	789624	16	175,800,128,177,175,104,158,610,275,219,112,109,102,55,79,350,	0,680,2129,2342,4834,5733,6100,6335,7263,9141,9440,9636,9829,10017,10280,10448,
#Deleted in new
chr11	65642117	65642553	chr11:65642117-65642553	0	+	65642117	65642117	8553170	2	260,91,	0,345,
#Deleted in new
chr11	65645810	65646710	chr11:65645810-65646710	0	+	65645810	65645810	8553170	3	147,158,255,	0,410,645,
#Partially deleted in new
chr11	65647365	65650479	chr11:65647365-65650479	0	+	65647365	65647365	8553170	6	293,161,109,102,55,79,	0,2146,2391,2584,2772,3035,
#Deleted in new
chr11	65649191	65649253	chr11:65649191-65649253	3	+	65649191	65649191	5263520	1	62,	0,
#Deleted in new
chr11	65649685	65650587	chr11:65649685-65650587	0	+	65649685	65649685	8553170	5	180,102,55,79,19,	0,264,452,715,883,
#Deleted in new
chr11	65650281	65650918	chr11:65650281-65650918	0	+	65650281	65650281	8553170	2	198,350,	0,287,
#Partially deleted in new
chr11	65653595	65663094	chr11:65653595-65663094	3	-	65654377	65662832	0	11	1405,75,81,213,105,132,92,149,152,27,269,	0,2092,2259,4691,5122,6070,6528,8091,8341,8583,9230,
#Partially deleted in new
chr11	65653596	65662972	chr11:65653596-65662972	1	-	65654951	65662832	789624	10	1404,17,11,105,132,92,149,152,27,147,	0,2091,4892,5121,6069,6527,8090,8340,8582,9229,
#Partially deleted in new
chr11	65653598	65662972	chr11:65653598-65662972	1	-	65654377	65662832	789624	12	911,182,75,81,213,105,132,92,149,152,27,147,	0,1220,2089,2256,4688,5119,6067,6525,8088,8338,8580,9227,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	65653600	65662895	chr11:65653600-65662895	1	-	65655586	65662832	789624	10	2162,81,213,105,132,92,149,152,27,70,	0,2254,4686,5117,6065,6523,8086,8336,8578,9225,
#Partially deleted in new
chr11	65653601	65663090	chr11:65653601-65663090	1	-	65654377	65662832	0	11	1399,75,81,213,105,123,92,149,152,27,265,	0,2086,2253,4685,5116,6064,6522,8085,8335,8577,9224,
#Partially deleted in new
chr11	65653601	65662895	chr11:65653601-65662895	0	-	65655916	65662832	789624	12	908,182,75,81,31,105,132,92,149,152,27,70,	0,1217,2086,2253,4685,5116,6064,6522,8085,8335,8577,9224,
#Partially deleted in new
chr11	65653966	65662915	chr11:65653966-65662915	0	-	65653966	65653966	8553170	10	1034,75,81,213,105,132,92,402,27,90,	0,1721,1888,4320,4751,5699,6157,7720,8212,8859,
#Partially deleted in new
chr11	65654811	65662918	chr11:65654811-65662918	0	-	65654811	65662832	789624	11	189,75,81,213,105,132,92,182,152,27,93,	0,876,1043,3475,3906,4854,5312,6875,7125,7367,8014,
#Partially deleted in new
chr11	65655706	65659743	chr11:65655706-65659743	0	-	65655706	65659743	789624	3	56,81,78,	0,148,3959,
#Partially deleted in new
chr11	65655856	65662960	chr11:65655856-65662960	0	-	65659670	65662832	789624	8	79,213,105,132,149,152,27,135,	0,2430,2861,3809,5830,6080,6322,6969,
#Partially deleted in new
chr11	65658286	65662915	chr11:65658286-65662915	0	-	65661719	65662832	789624	7	213,105,132,92,149,27,90,	0,431,1379,1837,3400,3892,4539,
#Partially deleted in new
chr11	65658429	65662908	chr11:65658429-65662908	0	-	65659788	65662832	789624	6	70,105,132,152,27,83,	0,288,1236,3507,3749,4396,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	65658601	65660792	chr11:65658601-65660792	0	-	65658601	65658601	8553170	3	221,132,669,	0,1064,1522,
#Partially deleted in new
chr11	65658717	65662908	chr11:65658717-65662908	0	-	65659670	65662832	789624	6	105,132,92,152,27,83,	0,948,1406,3219,3461,4108,
#Partially deleted in new
chr11	65658729	65662899	chr11:65658729-65662899	0	-	65658729	65662832	789624	6	93,132,92,149,152,74,	0,936,1394,2957,3207,4096,
#Partially deleted in new
chr11	65658731	65662792	chr11:65658731-65662792	0	-	65658731	65662029	789624	7	91,132,92,149,152,27,128,	0,934,1392,2955,3205,3447,3933,
#Deleted in new
chr11	65658768	65660162	chr11:65658768-65660162	0	-	65658768	65658768	8553170	2	54,497,	0,897,
#Partially deleted in new
chr11	65659681	65662915	chr11:65659681-65662915	0	-	65659681	65662832	789624	6	57,92,149,152,27,90,	0,442,2005,2255,2497,3144,
#Partially deleted in new
chr11	65659743	65662908	chr11:65659743-65662908	0	-	65661747	65662832	789624	6	54,92,133,152,27,83,	0,380,1943,2193,2435,3082,
#Partially deleted in new
chr11	65660051	65662918	chr11:65660051-65662918	0	-	65660051	65660051	8553170	5	164,149,152,27,93,	0,1635,1885,2127,2774,
#Partially deleted in new
chr11	65660155	65662918	chr11:65660155-65662918	0	-	65660155	65660155	8553170	5	60,149,152,169,93,	0,1531,1781,2023,2670,
#Partially deleted in new
chr11	65660171	65662793	chr11:65660171-65662793	0	-	65660171	65662029	789624	5	44,149,152,27,84,	0,1515,1765,2007,2538,
#Partially deleted in new
chr11	65660188	65662428	chr11:65660188-65662428	0	-	65660188	65662029	789624	4	27,149,152,250,	0,1498,1748,1990,
#Partially deleted in new
chr11	65661407	65662972	chr11:65661407-65662972	0	-	65661407	65661407	8553170	4	428,152,27,147,	0,529,771,1418,
#Partially deleted in new
chr11	65661510	65662897	chr11:65661510-65662897	0	-	65661510	65661510	8553170	3	325,269,72,	0,426,1315,
#Partially deleted in new
chr11	65661632	65662944	chr11:65661632-65662944	0	-	65661632	65661632	8553170	3	456,27,119,	0,546,1193,
#Partially deleted in new
chr11	65661942	65662780	chr11:65661942-65662780	0	-	65661942	65662029	789624	3	146,27,402,	0,236,436,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	65663085	65671716	chr11:65663085-65671716	3	+	65663085	65663085	8553170	5	63,257,123,87,294,	0,341,2335,3045,8337,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	65695551	65695837	chr11:65695551-65695837	3	+	65695551	65695551	8553170	1	286,	0,
#Partially deleted in new
chr11	65711995	65719604	chr11:65711995-65719604	1	+	65712267	65719181	0	14	284,67,69,137,156,75,75,249,90,141,94,160,82,558,	0,383,770,926,1352,1597,1778,2499,2825,4671,4893,6594,6877,7051,
#Partially deleted in new
chr11	65712017	65719604	chr11:65712017-65719604	1	+	65712267	65719181	0	13	262,67,69,137,75,75,249,90,141,94,160,82,558,	0,361,748,904,1575,1756,2477,2803,4649,4871,6572,6855,7029,
#Partially deleted in new
chr11	65712033	65719602	chr11:65712033-65719602	3	+	65712267	65719181	0	13	412,69,137,156,75,75,249,90,141,94,160,82,556,	0,732,888,1314,1559,1740,2461,2787,4633,4855,6556,6839,7013,
#Partially deleted in new
chr11	65712050	65713319	chr11:65712050-65713319	0	+	65712050	65712050	8553170	4	229,67,69,398,	0,328,715,871,
#Partially deleted in new
chr11	65712238	65719364	chr11:65712238-65719364	1	+	65712267	65719181	0	12	207,69,137,75,75,249,90,141,94,160,82,318,	0,527,683,1354,1535,2256,2582,4428,4650,6351,6634,6808,
#Partially deleted in new
chr11	65712245	65714584	chr11:65712245-65714584	0	+	65714536	65714584	789624	7	34,96,69,137,75,75,90,	0,104,520,676,1347,1528,2249,
#Partially deleted in new
chr11	65712377	65713664	chr11:65712377-65713664	0	+	65712377	65713664	789624	5	68,69,134,156,72,	0,388,544,970,1215,
#Partially deleted in new
chr11	65712416	65714910	chr11:65712416-65714910	0	+	65712416	65712416	8553170	7	29,69,137,75,75,84,90,	0,349,505,1176,1357,2243,2404,
#Partially deleted in new
chr11	65712423	65714938	chr11:65712423-65714938	0	+	65712423	65712423	8553170	7	22,69,137,75,75,249,118,	0,342,498,1169,1350,2071,2397,
#Partially deleted in new
chr11	65712495	65714645	chr11:65712495-65714645	0	+	65712536	65714645	789624	6	102,69,137,75,75,151,	0,270,426,1097,1278,1999,
#Partially deleted in new
chr11	65712499	65714729	chr11:65712499-65714729	0	+	65712536	65714729	789624	7	98,69,137,156,75,75,235,	0,266,422,848,1093,1274,1995,
#Partially deleted in new
chr11	65712619	65719603	chr11:65712619-65719603	1	+	65714536	65719181	789624	11	215,137,75,75,249,90,141,94,160,82,557,	0,302,973,1154,1875,2201,4047,4269,5970,6253,6427,
#Partially deleted in new
chr11	65712626	65713665	chr11:65712626-65713665	0	+	65712626	65712626	8553170	4	208,137,156,73,	0,295,721,966,
#Partially deleted in new
chr11	65712804	65714673	chr11:65712804-65714673	0	+	65714536	65714673	789624	4	254,75,75,179,	0,788,969,1690,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	65714004	65720486	chr11:65714004-65720486	0	-	65714004	65714004	8553170	4	1313,129,120,245,	0,5676,6040,6237,
#Partially deleted in new
chr11	65715000	65720526	chr11:65715000-65720526	0	-	65715000	65715000	8553170	5	317,231,129,120,285,	0,2662,4680,5044,5241,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	65715031	65718469	chr11:65715031-65718469	0	-	65715031	65715031	8553170	3	286,85,1225,	0,901,2213,
#Partially deleted in new
chr11	65715079	65720798	chr11:65715079-65720798	0	-	65719782	65720758	0	5	238,2565,120,176,212,	0,2165,4965,5162,5507,
#Deleted in new
chr11	65716232	65717048	chr11:65716232-65717048	0	+	65716232	65716232	8553170	2	575,160,	0,656,
#Deleted in new
chr11	65717672	65720947	chr11:65717672-65720947	3	-	65719782	65720758	0	4	2137,120,176,361,	0,2372,2569,2914,
#Deleted in new
chr11	65717708	65720818	chr11:65717708-65720818	0	-	65717708	65717708	8553170	3	2101,120,577,	0,2336,2533,
#Deleted in new
chr11	65717708	65720798	chr11:65717708-65720798	0	-	65719782	65720758	0	5	1448,129,120,176,212,	0,1972,2336,2533,2878,
#Deleted in new
chr11	65717708	65720586	chr11:65717708-65720586	0	-	65717708	65717708	8553170	2	2101,542,	0,2336,
#Deleted in new
chr11	65717714	65720803	chr11:65717714-65720803	0	-	65719782	65720758	0	5	1108,129,120,176,217,	0,1966,2330,2527,2872,
#Deleted in new
chr11	65717737	65720482	chr11:65717737-65720482	0	-	65717737	65717737	8553170	4	1419,129,120,241,	0,1943,2307,2504,
#Deleted in new
chr11	65718343	65719070	chr11:65718343-65719070	0	+	65718343	65718343	8553170	3	406,82,24,	0,529,703,
#Deleted in new
chr11	65718535	65720468	chr11:65718535-65720468	0	-	65718535	65718535	8553170	4	234,129,120,227,	0,1145,1509,1706,
#Deleted in new
chr11	65718705	65719603	chr11:65718705-65719603	0	+	65718705	65719181	789624	3	70,82,557,	0,167,341,
#Deleted in new
chr11	65719720	65720801	chr11:65719720-65720801	1	-	65719768	65720758	789624	3	444,176,215,	0,521,866,
#Deleted in new
chr11	65720053	65720798	chr11:65720053-65720798	0	-	65720053	65720053	8553170	2	364,212,	0,533,
#Partially deleted in new
chr11	65726938	65728214	chr11:65726938-65728214	7	+	65726938	65726938	16724991	1	1276,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	65745728	65771585	chr11:65745728-65771585	3	+	65745728	65745728	8553170	2	70,394,	0,25463,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	65775892	65780802	chr11:65775892-65780802	3	-	65777855	65780591	789624	2	4450,361,	0,4549,
#Deleted in new
chr11	65787021	65797219	chr11:65787021-65797219	3	+	65787373	65795341	789624	4	452,218,190,2174,	0,7009,7516,8024,
#Deleted in new
chr11	65789050	65790021	chr11:65789050-65790021	0	-	65789050	65789050	8553170	2	387,85,	0,886,
#Deleted in new
chr11	65789050	65790868	chr11:65789050-65790868	3	-	65789050	65789050	789624	2	387,107,	0,1711,
#Deleted in new
chr11	65789050	65789875	chr11:65789050-65789875	1	-	65789050	65789050	8553170	2	387,106,	0,719,
#Deleted in new
chr11	65790128	65794095	chr11:65790128-65794095	0	+	65790128	65790128	8553170	3	360,133,65,	0,2189,3902,
#Deleted in new
chr11	65793708	65796089	chr11:65793708-65796089	1	+	65794116	65795341	789624	3	540,190,1044,	0,829,1337,
#Deleted in new
chr11	65795945	65797219	chr11:65795945-65797219	3	-	65795945	65795945	8553170	2	684,360,	0,914,
#Partially deleted in new
chr11	65823021	65858157	chr11:65823021-65858157	0	-	65823021	65823021	8553170	4	245,126,334,61,	0,1501,3254,35075,
#Deleted in new
chr11	65823021	65824103	chr11:65823021-65824103	0	-	65823021	65823021	8553170	1	1082,	0,
#Partially deleted in new
chr11	65826321	65831770	chr11:65826321-65831770	0	-	65826321	65826321	8553170	2	288,473,	0,4976,
#Partially deleted in new
chr11	65833640	65853701	chr11:65833640-65853701	3	+	65834065	65853335	789624	13	461,105,111,122,124,105,106,76,40,87,160,86,420,	0,15837,16279,16509,16790,17110,17414,17687,17999,18824,18989,19232,19641,
#Partially deleted in new
chr11	65833833	65850760	chr11:65833833-65850760	0	+	65833833	65833833	8553170	4	268,105,635,10,	0,15644,16086,16917,
#Partially deleted in new
chr11	65833898	65850253	chr11:65833898-65850253	0	+	65833898	65833898	8553170	3	203,168,776,	0,1607,15579,
#Partially deleted in new
chr11	65833942	65849512	chr11:65833942-65849512	0	+	65833942	65833942	8553170	3	141,168,35,	0,1563,15535,
#Partially deleted in new
chr11	65833958	65851454	chr11:65833958-65851454	0	+	65833958	65833958	8553170	5	143,63,635,105,400,	0,15519,15961,16792,17096,
#Partially deleted in new
chr11	65833966	65850563	chr11:65833966-65850563	0	+	65833966	65833966	8553170	3	107,105,644,	0,15511,15953,
#Partially deleted in new
chr11	65833972	65850259	chr11:65833972-65850259	0	+	65833972	65833972	8553170	2	129,782,	0,15505,
#Partially deleted in new
chr11	65833978	65856896	chr11:65833978-65856896	0	+	65833978	65833978	8553170	11	123,105,111,122,124,105,625,87,160,86,768,	0,15499,15941,16171,16452,16772,17076,18486,18651,18894,22150,
#Partially deleted in new
chr11	65834003	65851348	chr11:65834003-65851348	0	+	65834003	65834003	8553170	7	98,105,352,124,105,106,21,	0,15474,15916,16427,16747,17051,17324,
#Deleted in new
chr11	65854674	65859415	chr11:65854674-65859415	3	-	65855335	65858099	0	5	774,77,308,534,185,	0,979,1260,3422,4556,
#Deleted in new
chr11	65854831	65858194	chr11:65854831-65858194	0	-	65854831	65854831	8553170	2	1411,98,	0,3265,
#Deleted in new
chr11	65854836	65858333	chr11:65854836-65858333	1	-	65855335	65858099	0	4	612,77,308,237,	0,817,1098,3260,
#Deleted in new
chr11	65854974	65857033	chr11:65854974-65857033	1	-	65855335	65856194	789624	4	474,77,308,103,	0,679,960,1956,
#Deleted in new
chr11	65855008	65857868	chr11:65855008-65857868	1	-	65855335	65856194	789624	4	440,77,308,237,	0,645,926,2623,
#Deleted in new
chr11	65855053	65856964	chr11:65855053-65856964	1	-	65855335	65856194	789624	4	395,77,308,80,	0,600,881,1831,
#Deleted in new
chr11	65855240	65861421	chr11:65855240-65861421	1	-	65855335	65861373	789624	4	208,77,308,165,	0,413,694,6016,
#Deleted in new
chr11	65855256	65859289	chr11:65855256-65859289	1	-	65855335	65856194	789624	4	192,77,308,59,	0,397,678,3974,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	65855357	65862026	chr11:65855357-65862026	0	-	65855357	65861373	789624	5	91,77,308,218,161,	0,296,577,6013,6508,
#Deleted in new
chr11	65855417	65856473	chr11:65855417-65856473	0	-	65855417	65856194	789624	3	31,77,539,	0,236,517,
#Deleted in new
chr11	65855956	65857543	chr11:65855956-65857543	0	-	65855956	65856194	789624	2	286,451,	0,1136,
#Deleted in new
chr11	65855973	65859282	chr11:65855973-65859282	0	-	65855973	65858099	789624	3	269,246,52,	0,2123,3257,
#Partially deleted in new
chr11	65857125	65862008	chr11:65857125-65862008	0	+	65857423	65862008	789624	6	306,108,214,130,86,62,	0,3099,3549,3847,4224,4821,
#Partially deleted in new
chr11	65860061	65866440	chr11:65860061-65866440	1	+	65861062	65866052	789624	16	271,130,86,99,69,86,141,93,122,98,117,96,129,104,84,455,	0,911,1288,1885,2149,2382,3003,3348,3538,3742,4435,4658,4955,5158,5749,5924,
#Partially deleted in new
chr11	65860404	65866439	chr11:65860404-65866439	3	+	65860753	65866052	0	16	484,130,86,99,69,86,141,93,122,98,117,96,129,104,84,454,	0,568,945,1542,1806,2039,2660,3005,3195,3399,4092,4315,4612,4815,5406,5581,
#Partially deleted in new
chr11	65860544	65863089	chr11:65860544-65863089	0	+	65861062	65863089	789624	6	558,86,99,69,86,25,	0,805,1402,1666,1899,2520,
#Partially deleted in new
chr11	65860859	65866417	chr11:65860859-65866417	0	+	65860859	65865117	789624	16	29,130,86,99,69,86,141,93,122,98,117,96,31,104,84,432,	0,113,490,1087,1351,1584,2205,2550,2740,2944,3637,3860,4255,4360,4951,5126,
#Partially deleted in new
chr11	65861064	65865274	chr11:65861064-65865274	0	+	65861064	65865274	789624	13	38,86,99,69,86,141,93,122,101,117,96,129,55,	0,285,882,1146,1379,2000,2345,2535,2736,3432,3655,3952,4155,
#Partially deleted in new
chr11	65861296	65863422	chr11:65861296-65863422	0	+	65861296	65861296	8553170	6	139,99,69,86,141,13,	0,650,914,1147,1768,2113,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	65861357	65866438	chr11:65861357-65866438	0	+	65861357	65861357	8553170	7	688,69,86,141,1204,604,628,	0,853,1086,1707,2052,3362,4453,
#Partially deleted in new
chr11	65861398	65863890	chr11:65861398-65863890	0	+	65861398	65863890	789624	8	37,99,69,86,141,93,80,87,	0,548,812,1045,1666,2011,2179,2405,
#Deleted in new
chr11	65863076	65866418	chr11:65863076-65866418	0	+	65863076	65863076	8553170	9	129,93,122,285,117,426,104,84,433,	0,333,523,727,1420,1643,2143,2734,2909,
#Deleted in new
chr11	65863632	65864815	chr11:65863632-65864815	0	+	65863632	65863632	8553170	3	269,117,96,	0,864,1087,
#Deleted in new
chr11	65863805	65864815	chr11:65863805-65864815	0	+	65863805	65863805	8553170	3	96,117,72,	0,691,938,
#Deleted in new
chr11	65863885	65865644	chr11:65863885-65865644	0	+	65863885	65863885	8553170	4	16,117,96,530,	0,611,834,1229,
#Deleted in new
chr11	65864859	65866175	chr11:65864859-65866175	0	+	65864859	65864859	8553170	3	286,104,365,	0,360,951,
#Deleted in new
chr11	65865167	65866439	chr11:65865167-65866439	0	+	65865167	65865167	8553170	3	156,84,454,	0,643,818,
#Deleted in new
chr11	65865219	65866439	chr11:65865219-65866439	0	+	65865219	65865898	789624	2	104,629,	0,591,
#Deleted in new
chr11	65865857	65867653	chr11:65865857-65867653	0	+	65865857	65865857	8553170	2	37,397,	0,1399,
#Deleted in new
chr11	65866440	65867080	chr11:65866440-65867080	0	-	65866917	65867080	789624	2	272,271,	0,369,
#Deleted in new
chr11	65866440	65872811	chr11:65866440-65872811	0	-	65866917	65872354	0	12	272,235,196,127,120,120,117,123,207,49,118,129,	0,404,1420,1854,2069,3416,3680,4095,4716,5529,5803,6242,
#Deleted in new
chr11	65866441	65869922	chr11:65866441-65869922	0	-	65866441	65866441	8553170	5	271,270,196,127,1413,	0,368,1419,1853,2068,
#Deleted in new
chr11	65866446	65872906	chr11:65866446-65872906	3	-	65866917	65872354	0	11	633,196,127,120,120,117,123,207,49,118,224,	0,1414,1848,2063,3410,3674,4089,4710,5523,5797,6236,
#Deleted in new
chr11	65866446	65868007	chr11:65866446-65868007	0	-	65866693	65868007	789624	3	266,59,147,	0,574,1414,
#Deleted in new
chr11	65866446	65872743	chr11:65866446-65872743	1	-	65866571	65872354	789624	11	266,196,127,120,120,117,123,207,49,118,61,	0,1414,1848,2063,3410,3674,4089,4710,5523,5797,6236,
#Deleted in new
chr11	65866446	65868416	chr11:65866446-65868416	0	-	65866571	65868416	789624	4	266,90,196,122,	0,398,1414,1848,
#Deleted in new
chr11	65866447	65867906	chr11:65866447-65867906	0	-	65866917	65867906	789624	3	265,214,46,	0,418,1413,
#Deleted in new
chr11	65866564	65867667	chr11:65866564-65867667	0	-	65866564	65866564	8553170	3	148,235,25,	0,280,1078,
#Deleted in new
chr11	65866824	65868512	chr11:65866824-65868512	0	-	65866824	65866824	8553170	3	255,196,207,	0,1036,1481,
#Deleted in new
chr11	65866978	65868536	chr11:65866978-65868536	0	-	65866978	65867989	789624	4	101,153,127,27,	0,882,1316,1531,
#Deleted in new
chr11	65867672	65868429	chr11:65867672-65868429	0	-	65867672	65867672	8553170	2	384,135,	0,622,
#Deleted in new
chr11	65867885	65869512	chr11:65867885-65869512	0	-	65867885	65867885	8553170	4	171,127,120,153,	0,409,624,1474,
#Deleted in new
chr11	65867889	65872019	chr11:65867889-65872019	0	-	65867889	65867889	8553170	6	167,127,120,120,117,1484,	0,405,620,1967,2231,2646,
#Deleted in new
chr11	65868479	65871202	chr11:65868479-65871202	0	-	65868479	65868479	8553170	4	361,617,538,46,	0,880,1641,2677,
#Deleted in new
chr11	65869856	65872942	chr11:65869856-65872942	0	-	65871335	65872354	789624	7	120,117,123,253,49,118,260,	0,264,679,1300,2113,2387,2826,
#Deleted in new
chr11	65870120	65872654	chr11:65870120-65872654	0	-	65870120	65872354	789624	5	117,123,207,49,411,	0,415,1036,1849,2123,
#Deleted in new
chr11	65870178	65873592	chr11:65870178-65873592	0	-	65870178	65872354	789624	6	59,123,207,49,118,58,	0,357,978,1791,2065,3356,
#Deleted in new
chr11	65870215	65872740	chr11:65870215-65872740	0	-	65871335	65872354	789624	5	22,123,207,156,58,	0,320,941,1990,2467,
#Deleted in new
chr11	65871415	65872772	chr11:65871415-65872772	0	-	65871415	65871415	8553170	3	603,118,90,	0,828,1267,
#Partially deleted in new
chr11	65879808	65883741	chr11:65879808-65883741	3	+	65879854	65883618	789624	10	133,85,114,155,97,81,126,65,210,234,	0,393,1598,2366,2621,2800,2970,3260,3406,3699,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	65879841	65880622	chr11:65879841-65880622	0	+	65879841	65879841	8553170	2	100,421,	0,360,
#Partially deleted in new
chr11	65879850	65883741	chr11:65879850-65883741	1	+	65879854	65883499	789624	9	91,85,114,155,97,81,126,65,527,	0,351,1556,2324,2579,2758,2928,3218,3364,
#Partially deleted in new
chr11	65879857	65882877	chr11:65879857-65882877	0	+	65879857	65882877	789624	6	84,85,114,155,97,99,	0,344,1549,2317,2572,2921,
#Partially deleted in new
chr11	65883740	65885572	chr11:65883740-65885572	0	-	65883740	65883740	8553170	5	303,98,429,109,43,	0,651,829,1337,1789,
#Partially deleted in new
chr11	65883920	65888531	chr11:65883920-65888531	1	-	65883973	65888418	789624	10	123,98,87,64,109,155,101,127,199,198,	0,471,649,1014,1157,1588,2401,3679,4013,4413,
#Partially deleted in new
chr11	65883920	65888539	chr11:65883920-65888539	3	-	65883973	65888418	789624	10	123,98,87,64,109,134,101,127,199,206,	0,471,649,1014,1157,1609,2401,3679,4013,4413,
#Partially deleted in new
chr11	65883922	65885629	chr11:65883922-65885629	0	-	65883922	65883922	8553170	5	121,98,87,202,100,	0,469,647,1012,1607,
#Partially deleted in new
chr11	65883924	65885580	chr11:65883924-65885580	0	-	65884387	65885580	789624	6	119,179,87,64,109,51,	0,386,645,1010,1153,1605,
#Partially deleted in new
chr11	65883947	65888514	chr11:65883947-65888514	1	-	65883977	65888418	789624	10	96,117,54,64,109,134,101,127,199,172,	0,444,655,987,1130,1582,2374,3652,3986,4395,
#Partially deleted in new
chr11	65884008	65888490	chr11:65884008-65888490	0	-	65885633	65888418	789624	9	35,98,87,64,109,134,127,199,157,	0,383,561,926,1069,1521,3591,3925,4325,
#Partially deleted in new
chr11	65884911	65885710	chr11:65884911-65885710	0	-	65884911	65884911	8553170	3	87,109,181,	0,166,618,
#Partially deleted in new
chr11	65884934	65888436	chr11:65884934-65888436	0	-	65885633	65888418	789624	6	64,109,155,127,199,103,	0,143,574,2665,2999,3399,
#Partially deleted in new
chr11	65885330	65888461	chr11:65885330-65888461	0	-	65885330	65885330	8553170	5	491,101,127,199,128,	0,991,2269,2603,3003,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	65886727	65888513	chr11:65886727-65888513	0	-	65886727	65886727	8553170	3	999,199,180,	0,1206,1606,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	65887329	65888510	chr11:65887329-65888510	0	-	65887329	65887329	8553170	2	803,177,	0,1004,
#Partially deleted in new
chr11	65890111	65891635	chr11:65890111-65891635	3	+	65890783	65891392	789624	1	1524,	0,
#Partially deleted in new
chr11	65892048	65900419	chr11:65892048-65900419	1	-	65892885	65900339	789624	2	1248,179,	0,8192,
#Partially deleted in new
chr11	65892219	65900526	chr11:65892219-65900526	3	-	65892885	65900339	789624	4	1077,108,198,286,	0,1794,4589,8021,
#Partially deleted in new
chr11	65892473	65900419	chr11:65892473-65900419	1	-	65892885	65900339	789624	3	823,198,179,	0,4335,7767,
#Partially deleted in new
chr11	65892644	65900419	chr11:65892644-65900419	1	-	65893288	65900339	789624	4	652,103,198,179,	0,1369,4164,7596,
#Partially deleted in new
chr11	65893003	65900573	chr11:65893003-65900573	0	-	65893003	65893041	789624	3	293,108,183,	0,1010,7387,
#Partially deleted in new
chr11	65916807	65919117	chr11:65916807-65919117	1	-	65917458	65919031	0	2	1411,208,	0,2102,
#Partially deleted in new
chr11	65916809	65919062	chr11:65916809-65919062	3	-	65917458	65919031	0	2	1406,153,	0,2100,
#Deleted in new
chr11	65916832	65918360	chr11:65916832-65918360	1	-	65917458	65918214	0	1	1528,	0,
#Deleted in new
chr11	65919256	65921561	chr11:65919256-65921561	3	+	65919501	65921435	0	7	287,73,94,120,94,89,232,	0,523,691,1086,1312,1627,2073,
#Deleted in new
chr11	65919273	65921401	chr11:65919273-65921401	0	+	65919501	65921401	789624	7	270,73,50,47,94,89,72,	0,506,674,1142,1295,1610,2056,
#Deleted in new
chr11	65919334	65921448	chr11:65919334-65921448	1	+	65919501	65921435	789624	7	209,73,94,120,115,89,119,	0,445,613,1008,1213,1549,1995,
#Deleted in new
chr11	65919436	65920972	chr11:65919436-65920972	0	+	65919436	65919436	8553170	5	107,262,120,94,89,	0,343,906,1132,1447,
#Deleted in new
chr11	65919501	65921530	chr11:65919501-65921530	1	+	65919501	65921435	789624	6	42,35,120,94,89,201,	0,505,841,1067,1382,1828,
#Deleted in new
chr11	65919723	65921554	chr11:65919723-65921554	1	+	65919797	65921435	789624	6	129,94,120,94,89,225,	0,224,619,845,1160,1606,
#Deleted in new
chr11	65920129	65921544	chr11:65920129-65921544	0	+	65920129	65920129	8553170	3	533,89,215,	0,754,1200,
#Deleted in new
chr11	65920313	65921450	chr11:65920313-65921450	0	+	65920313	65920313	8553170	4	149,94,89,121,	0,255,570,1016,
#Deleted in new
chr11	65921051	65921525	chr11:65921051-65921525	0	+	65921051	65921051	8553170	1	474,	0,
#Partially deleted in new
chr11	65945444	65959963	chr11:65945444-65959963	3	+	65945675	65959940	789624	8	378,137,719,148,171,100,125,147,	0,1435,1665,2556,8122,13438,13745,14372,
#Partially deleted in new
chr11	65945643	65959963	chr11:65945643-65959963	0	+	65945675	65958909	789624	5	179,171,100,125,147,	0,7923,13239,13546,14173,
#Partially deleted in new
chr11	65945643	65959963	chr11:65945643-65959963	0	+	65945675	65958909	789624	8	179,137,719,11,171,100,125,147,	0,1236,1466,2494,7923,13239,13546,14173,
#Partially deleted in new
chr11	65945655	65947296	chr11:65945655-65947296	0	+	65945655	65945655	8553170	2	211,417,	0,1224,
#Partially deleted in new
chr11	65945690	65947359	chr11:65945690-65947359	0	+	65945690	65945840	789624	3	176,137,250,	0,1189,1419,
#Partially deleted in new
chr11	65961688	65979828	chr11:65961688-65979828	3	+	65961780	65979030	0	20	405,58,56,127,106,78,100,143,207,125,116,143,174,111,88,91,136,90,122,817,	0,2385,2826,3403,3653,4013,4198,4387,4661,5570,5782,5990,14706,14967,15325,15874,16075,16911,17104,17323,
#Partially deleted in new
chr11	65961727	65967316	chr11:65961727-65967316	0	+	65961727	65961727	8553170	9	366,58,56,168,106,78,100,481,58,	0,2346,2787,3323,3614,3974,4159,4348,5531,
#Partially deleted in new
chr11	65961727	65964512	chr11:65961727-65964512	0	+	65961727	65961727	8553170	2	366,507,	0,2278,
#Partially deleted in new
chr11	65961728	65965129	chr11:65961728-65965129	0	+	65961728	65961728	8553170	4	365,126,56,38,	0,2277,2786,3363,
#Partially deleted in new
chr11	65961728	65965447	chr11:65961728-65965447	0	+	65961780	65965118	789624	5	365,58,56,168,106,	0,2345,2786,3322,3613,
#Deleted in new
chr11	65976748	65978152	chr11:65976748-65978152	0	+	65976748	65976748	8553170	4	18,88,91,389,	0,265,814,1015,
#Deleted in new
chr11	65977764	65978957	chr11:65977764-65978957	0	+	65977764	65977764	8553170	3	135,90,165,	0,835,1028,
#Deleted in new
chr11	65978486	65979089	chr11:65978486-65979089	0	+	65978486	65978486	8553170	3	203,122,78,	0,306,525,
#Deleted in new
chr11	65983678	65984331	chr11:65983678-65984331	7	-	65983678	65983678	16724991	1	653,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	65996544	66002157	chr11:65996544-66002157	3	-	65998598	66000389	0	6	2199,48,109,109,174,248,	0,2805,3022,3508,3758,5365,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	65996544	66002156	chr11:65996544-66002156	1	-	65998598	66000389	0	6	2199,48,109,109,179,117,	0,2805,3022,3508,3758,5495,
#Partially deleted in new
chr11	65998388	66002161	chr11:65998388-66002161	1	-	65998598	66000092	789624	5	355,48,109,109,122,	0,961,1178,1664,3651,
#Partially deleted in new
chr11	65998432	66002166	chr11:65998432-66002166	1	-	65998598	66000389	0	6	311,48,109,109,104,127,	0,917,1134,1620,1870,3607,
#Partially deleted in new
chr11	65998492	66002154	chr11:65998492-66002154	1	-	65998598	66000389	0	6	251,48,109,109,203,245,	0,857,1074,1560,1810,3417,
#Partially deleted in new
chr11	65998566	66002176	chr11:65998566-66002176	1	-	65998598	66000389	0	6	177,48,109,109,179,267,	0,783,1000,1486,1736,3343,
#Partially deleted in new
chr11	65998613	66000482	chr11:65998613-66000482	0	-	65999630	66000389	789624	5	130,48,109,63,180,	0,736,953,1485,1689,
#Partially deleted in new
chr11	65999359	66002160	chr11:65999359-66002160	0	-	65999359	66000389	789624	5	38,109,109,203,121,	0,207,693,943,2680,
#Partially deleted in new
chr11	65999362	66002136	chr11:65999362-66002136	0	-	65999362	66000389	789624	5	35,109,109,104,227,	0,204,690,940,2547,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	65999636	66000742	chr11:65999636-66000742	0	-	65999636	66000389	789624	3	39,109,440,	0,416,666,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	65999897	66002157	chr11:65999897-66002157	0	-	65999897	65999897	8553170	3	264,179,118,	0,405,2142,
#Deleted in new
chr11	66002078	66004149	chr11:66002078-66004149	3	+	66003250	66003772	0	3	492,139,524,	0,1156,1547,
#Deleted in new
chr11	66002227	66004146	chr11:66002227-66004146	1	+	66003250	66003772	0	3	286,139,521,	0,1007,1398,
#Deleted in new
chr11	66002255	66003335	chr11:66002255-66003335	0	+	66003250	66003335	789624	3	258,227,101,	0,588,979,
#Deleted in new
chr11	66002315	66003678	chr11:66002315-66003678	0	+	66002315	66002315	8553170	2	198,53,	0,1310,
#Deleted in new
chr11	66002479	66004146	chr11:66002479-66004146	0	+	66002479	66002479	8553170	2	91,521,	0,1146,
#Deleted in new
chr11	66002580	66004131	chr11:66002580-66004131	1	+	66003250	66003772	0	3	490,139,506,	0,654,1045,
#Deleted in new
chr11	66002781	66003898	chr11:66002781-66003898	1	+	66003250	66003772	0	3	258,139,273,	0,453,844,
#Deleted in new
chr11	66003235	66003893	chr11:66003235-66003893	0	+	66003235	66003235	8553170	2	94,268,	0,390,
#Partially deleted in new
chr11	66011840	66013505	chr11:66011840-66013505	3	+	66012044	66013400	0	3	444,126,189,	0,985,1476,
#Partially deleted in new
chr11	66016751	66026517	chr11:66016751-66026517	3	-	66016889	66026379	789624	12	165,115,76,61,73,64,144,92,148,114,213,1354,	0,308,2075,3388,3565,3812,4059,4342,4744,5014,6097,8412,
#Partially deleted in new
chr11	66016752	66021214	chr11:66016752-66021214	0	-	66016752	66016752	8553170	6	164,115,115,61,144,121,	0,307,2035,3387,4058,4341,
#Partially deleted in new
chr11	66041951	66049180	chr11:66041951-66049180	3	-	66042506	66045415	789624	3	1726,237,170,	0,3339,7059,
#Partially deleted in new
chr11	66042363	66045575	chr11:66042363-66045575	1	-	66042506	66045415	789624	2	1314,285,	0,2927,
#Partially deleted in new
chr11	66044990	66049151	chr11:66044990-66049151	0	-	66044990	66044990	8553170	2	537,141,	0,4020,
#Deleted in new
chr11	66050728	66052319	chr11:66050728-66052319	0	+	66050728	66050728	8553170	3	95,84,427,	0,791,1164,
#Deleted in new
chr11	66050825	66052390	chr11:66050825-66052390	0	+	66050825	66050825	8553170	3	186,84,355,	0,694,1210,
#Partially deleted in new
chr11	66052330	66069308	chr11:66052330-66069308	1	+	66052384	66068745	789624	21	187,47,78,240,118,110,97,92,216,138,81,228,150,90,108,108,143,102,100,186,635,	0,342,696,2745,4507,4935,5723,5983,6499,6870,7184,7451,8251,9355,9560,10678,11069,11297,15615,15817,16343,
#Partially deleted in new
chr11	66052335	66068911	chr11:66052335-66068911	3	+	66052384	66068745	0	22	182,47,78,240,51,118,110,97,92,216,138,81,228,150,90,108,108,143,102,100,186,238,	0,337,691,2740,3199,4502,4930,5718,5978,6494,6865,7179,7446,8246,9350,9555,10673,11064,11292,15610,15812,16338,
#Partially deleted in new
chr11	66052364	66058100	chr11:66052364-66058100	0	+	66052384	66058100	789624	8	153,47,78,240,48,118,110,47,	0,308,662,2711,3173,4473,4901,5689,
#Partially deleted in new
chr11	66052364	66058930	chr11:66052364-66058930	0	+	66052384	66058930	789624	10	153,47,78,240,48,118,107,97,92,101,	0,308,662,2711,3173,4473,4904,5689,5949,6465,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	66052365	66053960	chr11:66052365-66053960	0	+	66052365	66052365	8553170	2	152,1288,	0,307,
#Partially deleted in new
chr11	66052392	66055441	chr11:66052392-66055441	0	+	66052392	66052392	8553170	4	125,47,78,366,	0,280,634,2683,
#Partially deleted in new
chr11	66052399	66059044	chr11:66052399-66059044	0	+	66052399	66059044	789624	10	118,47,78,240,51,118,107,97,92,215,	0,273,627,2676,3135,4438,4869,5654,5914,6430,
#Partially deleted in new
chr11	66052595	66055305	chr11:66052595-66055305	0	+	66053092	66055305	789624	3	124,78,230,	0,431,2480,
#Partially deleted in new
chr11	66052687	66055586	chr11:66052687-66055586	0	+	66052687	66052687	8553170	4	32,78,245,52,	0,339,2388,2847,
#Partially deleted in new
chr11	66055292	66055840	chr11:66055292-66055840	0	+	66055292	66055292	8553170	2	23,306,	0,242,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	66057269	66058603	chr11:66057269-66058603	0	+	66057269	66057269	8553170	3	106,97,290,	0,784,1044,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	66058606	66060699	chr11:66058606-66060699	0	+	66058606	66058606	8553170	5	439,138,81,228,118,	0,594,908,1175,1975,
#Partially deleted in new
chr11	66060690	66068878	chr11:66060690-66068878	0	+	66060690	66068745	789624	9	41,90,108,108,143,102,97,186,205,	0,995,1200,2318,2709,2937,7258,7457,7983,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	66064640	66068674	chr11:66064640-66068674	0	+	66064640	66064640	8553170	2	3405,527,	0,3507,
#Deleted in new
chr11	66067276	66069619	chr11:66067276-66069619	3	-	66067276	66067276	8553170	2	263,239,	0,2104,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	66070362	66218697	chr11:66070362-66218697	0	+	66070362	66070362	8553170	7	480,88,90,126,145,92,2003,	0,123123,139999,140771,145756,146157,146332,
#Partially deleted in new
chr11	66070453	66244747	chr11:66070453-66244747	3	+	66070486	66243280	789624	24	389,88,90,126,145,92,81,60,161,94,81,116,136,105,107,155,111,103,43,43,136,227,120,1583,	0,123032,139908,140680,145665,146066,146241,149292,150177,150700,157050,160094,160351,161718,162506,163331,163678,164847,165444,168350,168688,170973,172458,172711,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	66083972	66211228	chr11:66083972-66211228	0	+	66121020	66211228	789624	5	258,47,88,90,95,	0,37048,109513,126389,127161,
#Partially deleted in new
chr11	66100762	66216250	chr11:66100762-66216250	0	+	66100812	66216250	789624	5	112,88,90,126,132,	0,92723,109599,110371,115356,
#Partially deleted in new
chr11	66216197	66220677	chr11:66216197-66220677	0	+	66216197	66219661	789624	5	66,92,81,261,47,	0,322,497,3347,4433,
#Partially deleted in new
chr11	66216542	66221210	chr11:66216542-66221210	0	+	66216542	66219753	789624	6	69,81,112,60,161,57,	0,152,963,3203,4088,4611,
#Deleted in new
chr11	66220287	66221190	chr11:66220287-66221190	0	+	66220287	66220287	8553170	2	504,37,	0,866,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	66220669	66221643	chr11:66220669-66221643	0	+	66220669	66220669	8553170	2	122,490,	0,484,
#Partially deleted in new
chr11	66230379	66243282	chr11:66230379-66243282	1	+	66230565	66243280	789624	13	284,136,105,107,155,111,103,43,43,136,227,120,118,	0,425,1792,2580,3405,3752,4921,5518,8424,8762,11047,12532,12785,
#Deleted in new
chr11	66231793	66234232	chr11:66231793-66234232	0	+	66233803	66234232	789624	4	483,107,155,101,	0,1166,1991,2338,
#Partially deleted in new
chr11	66233819	66235517	chr11:66233819-66235517	0	+	66233819	66233819	8553170	3	120,111,217,	0,312,1481,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	66238515	66241548	chr11:66238515-66241548	0	+	66238515	66238515	8553170	3	331,136,122,	0,626,2911,
#Partially deleted in new
chr11	66240947	66243318	chr11:66240947-66243318	1	+	66241613	66243280	789624	4	127,227,120,154,	0,479,1964,2217,
#Partially deleted in new
chr11	66241226	66243234	chr11:66241226-66243234	0	+	66241613	66243234	789624	3	427,120,70,	0,1685,1938,
#Partially deleted in new
chr11	66241447	66243637	chr11:66241447-66243637	0	+	66241447	66243280	789624	2	206,473,	0,1717,
#Partially deleted in new
chr11	66244839	66246239	chr11:66244839-66246239	3	-	66244839	66244839	8553170	2	273,124,	0,1276,
#Partially deleted in new
chr11	66257293	66267859	chr11:66257293-66267859	3	+	66258594	66266956	0	16	195,276,231,70,223,88,102,174,100,50,68,109,159,125,58,987,	0,1253,4448,4829,5520,6366,6557,6752,7051,7729,7874,8361,8560,8799,9139,9579,
#Partially deleted in new
chr11	66257293	66261829	chr11:66257293-66261829	0	+	66258594	66261829	789624	3	195,276,88,	0,1253,4448,
#Partially deleted in new
chr11	66257619	66262161	chr11:66257619-66262161	0	+	66258594	66262161	789624	4	111,239,231,39,	0,964,4122,4503,
#Partially deleted in new
chr11	66257619	66261948	chr11:66257619-66261948	0	+	66258594	66261948	789624	3	111,276,207,	0,927,4122,
#Partially deleted in new
chr11	66257702	66267860	chr11:66257702-66267860	1	+	66258594	66266956	0	16	169,276,231,70,223,88,102,174,100,50,68,109,159,125,58,988,	0,844,4039,4420,5111,5957,6148,6343,6642,7320,7465,7952,8151,8390,8730,9170,
#Partially deleted in new
chr11	66257702	66267805	chr11:66257702-66267805	1	+	66258594	66266956	0	16	169,239,231,70,223,88,102,174,100,50,68,109,159,125,58,933,	0,881,4039,4420,5111,5957,6148,6343,6642,7320,7465,7952,8151,8390,8730,9170,
#Partially deleted in new
chr11	66257702	66267859	chr11:66257702-66267859	1	+	66258594	66266956	0	15	169,239,70,223,88,102,174,100,50,68,109,159,125,58,987,	0,881,4420,5111,5957,6148,6343,6642,7320,7465,7952,8151,8390,8730,9170,
#Partially deleted in new
chr11	66257718	66267829	chr11:66257718-66267829	1	+	66258594	66267438	789624	6	153,239,231,70,223,641,	0,865,4023,4404,5095,9470,
#Partially deleted in new
chr11	66257807	66263706	chr11:66257807-66263706	0	+	66258594	66263706	789624	5	64,239,70,223,47,	0,776,4315,5006,5852,
#Partially deleted in new
chr11	66258035	66262177	chr11:66258035-66262177	0	+	66258594	66262177	789624	3	787,231,55,	0,3706,4087,
#Partially deleted in new
chr11	66258544	66267859	chr11:66258544-66267859	1	+	66258594	66266956	0	14	278,70,223,88,102,174,100,50,68,109,159,125,58,987,	0,3578,4269,5115,5306,5501,5800,6478,6623,7110,7309,7548,7888,8328,
#Partially deleted in new
chr11	66259566	66261834	chr11:66259566-66261834	3	-	66259566	66259566	8553170	3	276,153,110,	0,1697,2158,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	66260912	66267859	chr11:66260912-66267859	1	+	66261930	66266688	789624	13	1060,70,223,88,102,174,100,50,68,109,159,125,1427,	0,1210,1901,2747,2938,3133,3432,4110,4255,4742,4941,5180,5520,
#Deleted in new
chr11	66261835	66262655	chr11:66261835-66262655	0	+	66261835	66261835	8553170	2	137,533,	0,287,
#Deleted in new
chr11	66261929	66263062	chr11:66261929-66263062	0	+	66261929	66261929	8553170	3	43,70,249,	0,193,884,
#Deleted in new
chr11	66264776	66265666	chr11:66264776-66265666	3	-	66264776	66264776	8553170	3	86,78,315,	0,366,575,
#Deleted in new
chr11	66267634	66268129	chr11:66267634-66268129	3	-	66267634	66267634	8553170	2	197,75,	0,420,
#Partially deleted in new
chr11	66268532	66277492	chr11:66268532-66277492	3	+	66268679	66276238	0	6	161,73,96,96,132,1449,	0,3264,3624,3832,7271,7511,
#Partially deleted in new
chr11	66268589	66276629	chr11:66268589-66276629	1	+	66268679	66276238	789624	5	104,73,96,132,586,	0,3207,3567,7214,7454,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	66269831	66278525	chr11:66269831-66278525	3	-	66269831	66269831	8553170	2	2761,31,	0,8663,
#Deleted in new
chr11	66276778	66277487	chr11:66276778-66277487	0	-	66276778	66276778	8553170	2	265,188,	0,521,
#Deleted in new
chr11	66276868	66277492	chr11:66276868-66277492	3	-	66276868	66276868	8553170	2	156,324,	0,300,
#Deleted in new
chr11	66278189	66284193	chr11:66278189-66284193	1	+	66278456	66283395	789624	5	348,69,48,113,946,	0,4069,4543,4845,5058,
#Deleted in new
chr11	66278198	66284212	chr11:66278198-66284212	3	+	66278456	66283597	789624	6	339,69,48,113,144,643,	0,4060,4534,4836,5049,5371,
#Deleted in new
chr11	66278235	66282771	chr11:66278235-66282771	0	+	66278456	66281455	789624	4	302,158,69,39,	0,3181,4023,4497,
#Deleted in new
chr11	66278341	66284115	chr11:66278341-66284115	0	+	66278456	66282745	789624	6	196,95,48,113,144,546,	0,3917,4391,4693,4906,5228,
#Deleted in new
chr11	66278461	66285301	chr11:66278461-66285301	0	+	66278461	66278461	8553170	6	76,69,48,113,144,203,	0,3797,4271,4573,4786,6637,
#Deleted in new
chr11	66282593	66283750	chr11:66282593-66283750	0	+	66282593	66282593	8553170	4	187,113,144,181,	0,441,654,976,
#Partially deleted in new
chr11	66284579	66289145	chr11:66284579-66289145	1	-	66284636	66288985	789624	7	204,94,58,79,105,212,191,	0,293,1121,3018,3232,3501,4375,
#Partially deleted in new
chr11	66284579	66289170	chr11:66284579-66289170	3	-	66284636	66288985	789624	8	204,94,156,58,79,105,212,216,	0,293,801,1121,3018,3232,3501,4375,
#Partially deleted in new
chr11	66284579	66289128	chr11:66284579-66289128	1	-	66284701	66285756	789624	5	387,156,58,79,174,	0,801,1121,3018,4375,
#Deleted in new
chr11	66284579	66285646	chr11:66284579-66285646	0	-	66284579	66284579	8553170	2	387,266,	0,801,
#Deleted in new
chr11	66284579	66285335	chr11:66284579-66285335	1	-	66284636	66284965	789624	2	204,463,	0,293,
#Deleted in new
chr11	66284579	66285758	chr11:66284579-66285758	0	-	66284579	66284579	8553170	4	204,98,156,58,	0,289,801,1121,
#Deleted in new
chr11	66284580	66285623	chr11:66284580-66285623	0	-	66284580	66284580	8553170	3	203,94,243,	0,292,800,
#Partially deleted in new
chr11	66284915	66289128	chr11:66284915-66289128	0	-	66287650	66288985	789624	6	51,58,74,79,105,174,	0,785,2025,2682,2896,4039,
#Partially deleted in new
chr11	66285460	66289007	chr11:66285460-66289007	0	-	66285460	66288985	789624	6	112,58,79,105,212,53,	0,240,2137,2351,2620,3494,
#Partially deleted in new
chr11	66285483	66289037	chr11:66285483-66289037	0	-	66285483	66288985	789624	5	53,79,105,212,83,	0,2114,2328,2597,3471,
#Deleted in new
chr11	66287140	66289143	chr11:66287140-66289143	0	-	66287140	66287140	8553170	4	536,105,212,189,	0,671,940,1814,
#Deleted in new
chr11	66287211	66289137	chr11:66287211-66289137	0	-	66287211	66287211	8553170	3	465,212,183,	0,869,1743,
#Deleted in new
chr11	66287933	66289135	chr11:66287933-66289135	0	-	66287933	66287933	8553170	2	359,181,	0,1021,
#Partially deleted in new
chr11	66291869	66296664	chr11:66291869-66296664	3	+	66292013	66295653	789624	2	219,2343,	0,2452,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	66312852	66319237	chr11:66312852-66319237	3	+	66312852	66312852	8553170	2	140,404,	0,5981,
#Deleted in new
chr11	66314486	66317044	chr11:66314486-66317044	3	-	66314753	66317027	789624	1	2558,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	66330241	66336008	chr11:66330241-66336008	0	-	66330241	66330241	8553170	7	2511,152,132,306,1169,115,31,	0,3016,3285,3677,4272,5520,5736,
#Partially deleted in new
chr11	66332061	66336529	chr11:66332061-66336529	3	-	66332275	66336402	789624	10	691,152,132,306,738,92,73,115,181,213,	0,1196,1465,1857,2452,3345,3548,3700,3916,4255,
#Partially deleted in new
chr11	66332209	66335691	chr11:66332209-66335691	0	-	66335179	66335691	789624	7	543,152,132,120,738,67,82,	0,1048,1317,1709,2304,3197,3400,
#Partially deleted in new
chr11	66332222	66336840	chr11:66332222-66336840	1	-	66332275	66335828	789624	9	530,152,132,123,738,92,73,115,167,	0,1035,1304,1696,2291,3184,3387,3539,4451,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	66332589	66333553	chr11:66332589-66333553	0	-	66332589	66332589	8553170	2	820,27,	0,937,
#Partially deleted in new
chr11	66332608	66336436	chr11:66332608-66336436	0	-	66335640	66336402	789624	9	144,152,132,306,738,92,73,115,120,	0,649,918,1310,1905,2798,3001,3153,3708,
#Deleted in new
chr11	66334998	66335700	chr11:66334998-66335700	0	-	66334998	66334998	8553170	2	500,91,	0,611,
#Deleted in new
chr11	66335640	66336402	chr11:66335640-66336402	1	-	66335640	66336402	789624	3	42,115,86,	0,121,676,
#Partially deleted in new
chr11	66337332	66345119	chr11:66337332-66345119	1	-	66337667	66342234	789624	10	475,40,65,93,97,80,128,91,146,148,	0,910,1388,2788,3441,3634,3873,4200,4763,7639,
#Partially deleted in new
chr11	66337338	66345125	chr11:66337338-66345125	3	-	66337881	66342234	0	10	551,40,65,93,97,80,128,91,146,154,	0,904,1382,2782,3435,3628,3867,4194,4757,7633,
#Partially deleted in new
chr11	66337338	66342121	chr11:66337338-66342121	0	-	66337667	66342121	789624	8	551,65,93,97,80,128,91,26,	0,1382,2782,3435,3628,3867,4194,4757,
#Partially deleted in new
chr11	66337368	66345089	chr11:66337368-66345089	0	-	66337368	66337368	8553170	9	521,543,93,97,80,128,91,146,118,	0,874,2752,3405,3598,3837,4164,4727,7603,
#Partially deleted in new
chr11	66337777	66345079	chr11:66337777-66345079	0	-	66341016	66342234	789624	9	112,65,93,97,80,121,91,146,108,	0,943,2343,2996,3189,3435,3755,4318,7194,
#Partially deleted in new
chr11	66338242	66344812	chr11:66338242-66344812	0	-	66338242	66342234	789624	9	40,65,93,97,80,128,91,146,223,	0,478,1878,2531,2724,2963,3290,3853,6347,
#Partially deleted in new
chr11	66340773	66345083	chr11:66340773-66345083	0	-	66340773	66340773	8553170	5	273,128,91,146,112,	0,432,759,1322,4198,
#Partially deleted in new
chr11	66340773	66345079	chr11:66340773-66345079	0	-	66340773	66340773	8553170	4	560,91,146,108,	0,759,1322,4198,
#Partially deleted in new
chr11	66341948	66345125	chr11:66341948-66345125	0	-	66341948	66341948	8553170	2	293,154,	0,3023,
#Deleted in new
chr11	66345371	66347692	chr11:66345371-66347692	3	-	66346048	66347545	789624	2	869,1203,	0,1118,
#Partially deleted in new
chr11	66347949	66363760	chr11:66347949-66363760	0	+	66347949	66347949	789624	2	121,492,	0,15319,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	66347949	66353619	chr11:66347949-66353619	0	+	66347949	66347949	8553170	2	121,165,	0,5505,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	66360162	66364190	chr11:66360162-66364190	1	+	66360162	66360162	8553170	2	582,922,	0,3106,
#Partially deleted in new
chr11	66362520	66372099	chr11:66362520-66372099	1	-	66364263	66371591	789624	12	1027,200,86,106,85,98,135,140,164,82,49,90,	0,1704,3415,3605,4943,5251,6016,6539,6848,8723,9042,9489,
#Partially deleted in new
chr11	66362521	66371820	chr11:66362521-66371820	1	-	66363435	66371591	789624	12	1026,200,86,106,134,85,98,135,140,164,82,258,	0,1703,3414,3604,3909,4942,5250,6015,6538,6847,8722,9041,
#Partially deleted in new
chr11	66362521	66371820	chr11:66362521-66371820	0	-	66366152	66371591	789624	12	1026,200,86,66,134,85,98,135,140,164,82,258,	0,1703,3414,3604,3909,4942,5250,6015,6538,6847,8722,9041,
#Partially deleted in new
chr11	66362521	66372174	chr11:66362521-66372174	1	-	66363435	66371591	789624	13	1026,200,86,106,134,85,98,135,140,164,82,84,165,	0,1703,3414,3604,3909,4942,5250,6015,6538,6847,8722,9041,9488,
#Partially deleted in new
chr11	66362521	66371820	chr11:66362521-66371820	1	-	66364263	66371591	789624	11	1026,200,86,106,85,98,135,140,164,82,258,	0,1703,3414,3604,4942,5250,6015,6538,6847,8722,9041,
#Partially deleted in new
chr11	66362522	66371647	chr11:66362522-66371647	0	-	66367519	66371591	789624	12	1025,200,86,106,134,85,98,135,72,164,82,85,	0,1702,3413,3603,3908,4941,5249,6014,6537,6846,8721,9040,
#Partially deleted in new
chr11	66362522	66372214	chr11:66362522-66372214	3	-	66363435	66371591	789624	13	1025,200,86,106,134,85,98,135,140,164,82,49,205,	0,1702,3413,3603,3908,4941,5249,6014,6537,6846,8721,9040,9487,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	66374137	66374435	chr11:66374137-66374435	3	-	66374137	66374137	8553170	1	298,	0,
#Partially deleted in new
chr11	66389608	66390168	chr11:66389608-66390168	7	+	66389608	66389608	16724991	1	560,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	66393448	66393612	chr11:66393448-66393612	3	+	66393448	66393448	8553170	1	164,	0,
#Deleted in new
chr11	66409157	66410003	chr11:66409157-66410003	0	+	66409157	66409157	8553170	2	305,162,	0,684,
#Partially deleted in new
chr11	66409193	66417137	chr11:66409193-66417137	3	+	66409193	66409193	8553170	4	269,216,118,345,	0,959,1662,7599,
#Partially deleted in new
chr11	66410671	66417127	chr11:66410671-66417127	0	+	66410671	66410671	8553170	2	302,335,	0,6121,
#Deleted in new
chr11	66421003	66426707	chr11:66421003-66426707	3	+	66421179	66425989	789624	8	351,152,103,268,110,136,1436,747,	0,1116,1447,1670,2119,2574,2831,4957,
#Deleted in new
chr11	66421003	66423504	chr11:66421003-66423504	1	+	66421179	66423504	789624	5	351,152,103,268,4,	0,1116,1447,1670,2497,
#Deleted in new
chr11	66421090	66426055	chr11:66421090-66426055	0	+	66421179	66423584	789624	7	264,152,103,268,136,1436,95,	0,1029,1360,1583,2487,2744,4870,
#Deleted in new
chr11	66422883	66423845	chr11:66422883-66423845	0	+	66422883	66422883	8553170	2	58,268,	0,694,
#Deleted in new
chr11	66432762	66432902	chr11:66432762-66432902	3	+	66432762	66432762	8553170	1	140,	0,
#Partially deleted in new
chr11	66435074	66438848	chr11:66435074-66438848	3	-	66436006	66438754	0	5	1038,160,94,96,217,	0,2029,2275,3089,3557,
#Partially deleted in new
chr11	66435074	66438848	chr11:66435074-66438848	1	-	66436006	66438754	0	5	1038,160,94,96,139,	0,2029,2275,3089,3635,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	66435079	66466738	chr11:66435079-66466738	0	-	66435079	66435079	8553170	5	1033,160,94,96,826,	0,2024,2270,3084,30833,
#Deleted in new
chr11	66435833	66437222	chr11:66435833-66437222	0	-	66436836	66437222	789624	3	279,108,119,	0,968,1270,
#Partially deleted in new
chr11	66435837	66438834	chr11:66435837-66438834	1	-	66436836	66438754	0	6	275,94,160,94,96,203,	0,978,1266,1512,2326,2794,
#Partially deleted in new
chr11	66435837	66438826	chr11:66435837-66438826	0	-	66437426	66438754	789624	5	275,160,86,96,195,	0,1266,1512,2326,2794,
#Partially deleted in new
chr11	66454233	66454581	chr11:66454233-66454581	7	+	66454233	66454233	16724991	1	348,	0,
#Partially deleted in new
chr11	66466326	66477334	chr11:66466326-66477334	1	+	66468128	66476167	789624	7	119,142,24,102,195,189,1737,	0,1801,5021,6042,6914,7410,9271,
#Partially deleted in new
chr11	66466744	66477328	chr11:66466744-66477328	3	+	66468128	66476167	789624	7	283,153,130,102,195,189,1731,	0,1383,4497,5624,6496,6992,8853,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	66466868	66477337	chr11:66466868-66477337	1	+	66468128	66476167	789624	8	159,153,72,130,102,195,189,1740,	0,1259,1964,4373,5500,6372,6868,8729,
#Partially deleted in new
chr11	66466917	66477278	chr11:66466917-66477278	0	+	66468128	66472350	789624	7	110,153,121,123,195,189,1681,	0,1210,4324,5430,6323,6819,8680,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	66466923	66474651	chr11:66466923-66474651	1	+	66468128	66474081	789624	7	104,153,72,130,102,195,915,	0,1204,1909,4318,5445,6317,6813,
#Partially deleted in new
chr11	66466925	66475843	chr11:66466925-66475843	0	+	66471338	66475843	789624	6	102,130,102,195,189,246,	0,4316,5443,6315,6811,8672,
#Partially deleted in new
chr11	66466957	66476009	chr11:66466957-66476009	0	+	66466957	66466957	8553170	2	70,219,	0,8833,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	66467391	66471374	chr11:66467391-66471374	0	+	66468128	66471374	789624	4	167,153,72,133,	0,736,1441,3850,
#Partially deleted in new
chr11	66473423	66477337	chr11:66473423-66477337	0	+	66473423	66475574	789624	3	12,189,1766,	0,313,2148,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	66473489	66480231	chr11:66473489-66480231	3	-	66473489	66473489	789624	4	378,82,175,193,	0,654,1440,6549,
#Deleted in new
chr11	66474249	66474725	chr11:66474249-66474725	0	-	66474249	66474249	8553170	1	476,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	66474358	66480192	chr11:66474358-66480192	1	-	66474358	66474358	8553170	3	252,175,154,	0,571,5680,
#Partially deleted in new
chr11	66477345	66480231	chr11:66477345-66480231	0	-	66477345	66477345	8553170	2	751,193,	0,2693,
#Partially deleted in new
chr11	66477719	66480233	chr11:66477719-66480233	1	-	66477719	66477719	8553170	2	372,195,	0,2319,
#Partially deleted in new
chr11	66480012	66509550	chr11:66480012-66509550	1	+	66480413	66509251	789624	18	453,278,90,138,75,94,131,131,59,195,113,93,63,125,121,180,163,472,	0,2180,5160,6527,7255,7901,11240,11481,11685,12703,13054,13528,15193,15352,15617,17285,24599,29066,
#Partially deleted in new
chr11	66480012	66509657	chr11:66480012-66509657	1	+	66480413	66509251	789624	18	453,275,90,138,75,94,131,131,59,195,113,93,63,125,121,180,163,579,	0,2183,5160,6527,7255,7901,11240,11481,11685,12703,13054,13528,15193,15352,15617,17285,24599,29066,
#Partially deleted in new
chr11	66480430	66509657	chr11:66480430-66509657	3	+	66482200	66509251	0	18	35,291,90,138,75,94,131,131,59,195,113,93,63,125,121,180,163,579,	0,1749,4742,6109,6837,7483,10822,11063,11267,12285,12636,13110,14775,14934,15199,16867,24181,28648,
#Partially deleted in new
chr11	66480434	66487958	chr11:66480434-66487958	0	+	66485208	66487958	789624	6	31,182,90,138,75,45,	0,1854,4738,6105,6833,7479,
#Partially deleted in new
chr11	66480437	66487941	chr11:66480437-66487941	0	+	66482200	66487941	789624	5	28,278,138,75,28,	0,1755,6102,6830,7476,
#Partially deleted in new
chr11	66480437	66509345	chr11:66480437-66509345	1	+	66482200	66509251	0	17	28,275,138,75,94,131,131,59,195,113,93,63,125,121,180,163,267,	0,1758,6102,6830,7476,10815,11056,11260,12278,12629,13103,14768,14927,15192,16860,24174,28641,
#Partially deleted in new
chr11	66480438	66491533	chr11:66480438-66491533	0	+	66485208	66491533	789624	7	27,90,138,75,94,131,40,	0,4734,6101,6829,7475,10814,11055,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	66480740	66482470	chr11:66480740-66482470	0	+	66482200	66482470	789624	2	285,278,	0,1452,
#Partially deleted in new
chr11	66482070	66487943	chr11:66482070-66487943	0	+	66482200	66487943	789624	5	400,90,138,75,30,	0,3102,4469,5197,5843,
#Partially deleted in new
chr11	66491604	66495750	chr11:66491604-66495750	0	+	66491604	66491604	8553170	6	152,195,113,93,63,121,	0,1111,1462,1936,3601,4025,
#Partially deleted in new
chr11	66491730	66495750	chr11:66491730-66495750	0	+	66491730	66491730	8553170	6	26,195,113,93,284,121,	0,985,1336,1810,3475,3899,
#Partially deleted in new
chr11	66492428	66495424	chr11:66492428-66495424	0	+	66492428	66492428	8553170	6	93,195,113,93,63,60,	0,287,638,1112,2777,2936,
#Deleted in new
chr11	66492466	66493179	chr11:66492466-66493179	0	+	66492466	66492466	8553170	3	155,195,113,	0,249,600,
#Partially deleted in new
chr11	66504644	66509331	chr11:66504644-66509331	0	+	66504644	66504644	8553170	2	138,253,	0,4434,
#Partially deleted in new
chr11	66509078	66533613	chr11:66509078-66533613	3	+	66509156	66532037	8553170	17	236,77,35,273,47,39,73,132,107,121,159,70,159,134,135,87,1663,	0,1934,2126,5327,6461,6614,6782,10538,12191,14377,14645,17044,17570,20740,21815,22577,22872,
#Partially deleted in new
chr11	66510605	66533613	chr11:66510605-66533613	0	+	66510659	66514539	789624	15	101,77,273,47,39,73,132,107,121,159,70,159,134,135,1958,	0,407,3800,4934,5087,5255,9011,10664,12850,13118,15517,16043,19213,20288,21050,
#Partially deleted in new
chr11	66510608	66533627	chr11:66510608-66533627	3	+	66510659	66532037	789624	17	98,77,35,273,47,39,73,132,107,121,159,70,159,134,135,87,1677,	0,404,596,3797,4931,5084,5252,9008,10661,12847,13115,15514,16040,19210,20285,21047,21342,
#Partially deleted in new
chr11	66510608	66523531	chr11:66510608-66523531	0	+	66510659	66515884	789624	9	98,77,35,273,39,73,132,107,76,	0,404,596,3797,5084,5252,9008,10661,12847,
#Partially deleted in new
chr11	66510615	66519744	chr11:66510615-66519744	0	+	66511055	66514539	789624	6	474,273,47,39,73,128,	0,3790,4924,5077,5245,9001,
#Partially deleted in new
chr11	66510633	66514498	chr11:66510633-66514498	0	+	66511055	66514498	789624	3	456,35,93,	0,571,3772,
#Partially deleted in new
chr11	66510634	66523531	chr11:66510634-66523531	0	+	66510659	66514539	789624	9	72,77,273,39,73,132,107,194,76,	0,378,3771,5058,5226,8982,10635,12537,12821,
#Partially deleted in new
chr11	66510635	66523475	chr11:66510635-66523475	0	+	66510659	66523475	789624	9	71,77,35,47,39,73,132,107,20,	0,377,569,4904,5057,5225,8981,10634,12820,
#Partially deleted in new
chr11	66510641	66532080	chr11:66510641-66532080	1	+	66510659	66532037	789624	13	65,77,35,273,107,121,159,70,159,134,135,87,130,	0,371,563,3764,10628,12814,13082,15481,16007,19177,20252,21014,21309,
#Partially deleted in new
chr11	66510641	66533603	chr11:66510641-66533603	0	+	66510641	66510641	8553170	16	65,77,35,273,39,73,132,107,121,159,70,159,134,135,550,1308,	0,371,563,3764,5051,5219,8975,10628,12814,13082,15481,16007,19177,20252,21014,21654,
#Partially deleted in new
chr11	66510643	66523470	chr11:66510643-66523470	0	+	66510659	66514539	789624	9	63,77,273,47,39,73,128,107,15,	0,369,3762,4896,5049,5217,8977,10626,12812,
#Partially deleted in new
chr11	66510647	66515828	chr11:66510647-66515828	0	+	66510647	66510647	8553170	6	59,77,35,273,47,136,	0,365,557,3758,4892,5045,
#Partially deleted in new
chr11	66510648	66523844	chr11:66510648-66523844	0	+	66510659	66514539	789624	9	58,77,273,39,73,132,107,121,121,	0,364,3757,5044,5212,8968,10621,12807,13075,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr11	66510652	66527701	chr11:66510652-66527701	0	+	66510652	66510652	8553170	14	54,77,35,273,47,39,73,132,107,121,159,70,274,129,	0,360,552,3753,4887,5040,5208,8964,10617,12803,13071,15470,15996,16920,
#Partially deleted in new
chr11	66510654	66532219	chr11:66510654-66532219	1	+	66510659	66531775	789624	13	52,77,35,273,47,39,73,132,70,159,134,135,564,	0,358,550,3751,4885,5038,5206,8962,15468,15994,19164,20239,21001,
#Partially deleted in new
chr11	66510654	66532219	chr11:66510654-66532219	1	+	66510659	66514539	789624	16	52,77,273,47,39,73,132,107,121,159,70,159,134,135,87,269,	0,358,3751,4885,5038,5206,8962,10615,12801,13069,15468,15994,19164,20239,21001,21296,
#Partially deleted in new
chr11	66510669	66519757	chr11:66510669-66519757	0	+	66510669	66510669	8553170	7	37,77,35,273,192,73,141,	0,343,535,3736,4870,5191,8947,
#Partially deleted in new
chr11	66511011	66515586	chr11:66511011-66515586	0	+	66514525	66515586	789624	4	78,35,173,47,	0,193,3494,4528,
#Partially deleted in new
chr11	66511018	66523522	chr11:66511018-66523522	0	+	66511055	66514539	789624	6	71,273,241,132,107,67,	0,3387,4674,8598,10251,12437,
#Partially deleted in new
chr11	66514468	66521612	chr11:66514468-66521612	0	+	66514468	66514468	8553170	6	210,47,39,73,132,343,	0,1071,1224,1392,5148,6801,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	66514594	66520889	chr11:66514594-66520889	0	+	66514594	66514594	8553170	7	84,47,39,73,132,118,111,	0,945,1098,1266,5022,5715,6184,
#Partially deleted in new
chr11	66515691	66519887	chr11:66515691-66519887	0	+	66515691	66515691	8553170	3	40,73,271,	0,169,3925,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	66519682	66521302	chr11:66519682-66521302	0	+	66519682	66519682	8553170	2	66,524,	0,1096,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	66520636	66546036	chr11:66520636-66546036	0	-	66526956	66546003	789624	5	830,122,71,278,314,	0,3518,6299,23067,25086,
#Partially deleted in new
chr11	66521081	66546235	chr11:66521081-66546235	1	-	66526956	66546003	789624	5	385,71,177,278,513,	0,5854,8230,22622,24641,
#Deleted in new
chr11	66522850	66523512	chr11:66522850-66523512	0	+	66522850	66522850	8553170	2	515,57,	0,605,
#Deleted in new
chr11	66523176	66523883	chr11:66523176-66523883	0	+	66523176	66523176	8553170	2	400,160,	0,547,
#Partially deleted in new
chr11	66523481	66527058	chr11:66523481-66527058	0	+	66523481	66523481	8553170	4	95,159,70,410,	0,242,2641,3167,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	66535897	66546238	chr11:66535897-66546238	3	-	66539528	66546003	789624	3	3927,278,516,	0,7806,9825,
#Partially deleted in new
chr11	66542483	66546006	chr11:66542483-66546006	0	-	66542483	66542483	8553170	3	345,278,284,	0,1220,3239,
#Partially deleted in new
chr11	66546394	66563326	chr11:66546394-66563326	1	+	66546510	66563193	789624	21	392,115,120,87,88,79,82,86,93,231,148,151,109,141,183,135,180,147,66,159,292,	0,4844,5133,7650,8141,8735,8891,9750,10738,11304,11632,12841,13573,13776,14178,14832,15063,15627,15862,16401,16640,
#Partially deleted in new
chr11	66546840	66563329	chr11:66546840-66563329	3	+	66546937	66563193	0	21	244,115,120,87,88,79,82,86,93,231,148,151,109,141,183,135,180,147,66,159,295,	0,4398,4687,7204,7695,8289,8445,9304,10292,10858,11186,12395,13127,13330,13732,14386,14617,15181,15416,15955,16194,
#Partially deleted in new
chr11	66546914	66554561	chr11:66546914-66554561	0	+	66546937	66551124	789624	5	170,301,120,87,26,	0,4138,4613,7130,7621,
#Partially deleted in new
chr11	66558865	66560384	chr11:66558865-66560384	3	-	66558865	66558865	8553170	2	360,220,	0,1299,
#Partially deleted in new
chr11	66563462	66568596	chr11:66563462-66568596	3	-	66563932	66568486	0	13	545,59,91,65,120,81,97,146,114,76,219,99,323,	0,625,1095,1279,1424,2208,2368,2559,2828,3783,3981,4521,4811,
#Partially deleted in new
chr11	66563463	66567495	chr11:66563463-66567495	0	-	66563463	66563463	8553170	10	544,561,65,120,81,97,146,114,76,52,	0,624,1278,1423,2207,2367,2558,2827,3782,3980,
#Partially deleted in new
chr11	66564536	66566157	chr11:66564536-66566157	0	-	66565735	66566157	789624	6	112,65,120,79,97,136,	0,205,350,1134,1294,1485,
#Partially deleted in new
chr11	66564574	66567519	chr11:66564574-66567519	0	-	66564574	66567519	789624	9	74,65,120,81,97,146,111,76,76,	0,167,312,1096,1256,1447,1716,2671,2869,
#Partially deleted in new
chr11	66564741	66566134	chr11:66564741-66566134	0	-	66564741	66564741	8553170	4	65,120,257,113,	0,145,929,1280,
#Partially deleted in new
chr11	66564797	66566148	chr11:66564797-66566148	0	-	66564797	66564797	8553170	3	194,257,127,	0,873,1224,
#Partially deleted in new
chr11	66566290	66567827	chr11:66566290-66567827	0	-	66566290	66566290	8553170	3	114,61,384,	0,955,1153,
#Partially deleted in new
chr11	66566290	66567829	chr11:66566290-66567829	0	-	66566290	66566290	8553170	3	114,76,386,	0,955,1153,
#Partially deleted in new
chr11	66566374	66568841	chr11:66566374-66568841	0	-	66566374	66568019	789624	5	30,76,219,99,124,	0,871,1069,1609,2343,
#Deleted in new
chr11	66590175	66593083	chr11:66590175-66593083	3	-	66590465	66593015	789624	1	2908,	0,
#Partially deleted in new
chr11	66592820	66606019	chr11:66592820-66606019	3	+	66593261	66605855	0	8	480,73,138,178,61,78,104,318,	0,821,6295,6638,7668,12518,12668,12881,
#Partially deleted in new
chr11	66593152	66605912	chr11:66593152-66605912	0	+	66593152	66593152	8553170	7	148,73,521,61,78,104,211,	0,489,5963,7336,12186,12336,12549,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	66593189	66599803	chr11:66593189-66599803	0	+	66593189	66593189	8553170	3	111,73,688,	0,452,5926,
#Partially deleted in new
chr11	66593200	66605998	chr11:66593200-66605998	0	+	66593261	66605414	789624	8	100,73,138,178,61,263,104,297,	0,441,5915,6258,7288,11953,12288,12501,
#Partially deleted in new
chr11	66593203	66599611	chr11:66593203-66599611	0	+	66593203	66593203	8553170	2	97,496,	0,5912,
#Partially deleted in new
chr11	66593232	66605298	chr11:66593232-66605298	0	+	66593232	66593232	8553170	5	68,73,521,61,145,	0,409,5883,7256,11921,
#Partially deleted in new
chr11	66593240	66605919	chr11:66593240-66605919	1	+	66593659	66605855	789624	8	60,105,138,178,61,78,104,218,	0,369,5875,6218,7248,12098,12248,12461,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	66600033	66605780	chr11:66600033-66605780	0	+	66605395	66605780	789624	4	516,78,104,79,	0,5305,5455,5668,
#Partially deleted in new
chr11	66600434	66606017	chr11:66600434-66606017	0	+	66600434	66600434	8553170	4	115,263,104,316,	0,4719,5054,5267,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	66614963	66615090	chr11:66614963-66615090	3	-	66614963	66614963	8553170	1	127,	0,
#Partially deleted in new
chr11	66616581	66627347	chr11:66616581-66627347	3	+	66616720	66626668	0	3	476,1465,887,	0,7632,9879,
#Partially deleted in new
chr11	66616625	66627343	chr11:66616625-66627343	1	+	66616720	66626483	0	3	432,111,883,	0,7588,9835,
#Partially deleted in new
chr11	66616625	66646469	chr11:66616625-66646469	3	+	66616720	66644132	789624	3	432,691,443,	0,26824,29401,
#Partially deleted in new
chr11	66616629	66624593	chr11:66616629-66624593	1	+	66616720	66624288	789624	3	428,68,380,	0,7271,7584,
#Partially deleted in new
chr11	66616629	66638653	chr11:66616629-66638653	0	+	66616629	66616629	8553170	2	428,95,	0,21929,
#Deleted in new
chr11	66616629	66617373	chr11:66616629-66617373	0	+	66616629	66616629	8553170	2	428,139,	0,605,
#Partially deleted in new
chr11	66616630	66644632	chr11:66616630-66644632	0	+	66616720	66639806	789624	3	427,424,1183,	0,23069,26819,
#Partially deleted in new
chr11	66616645	66624467	chr11:66616645-66624467	1	+	66616720	66618548	789624	3	412,66,254,	0,1850,7568,
#Partially deleted in new
chr11	66616669	66646467	chr11:66616669-66646467	1	+	66616720	66646046	789624	2	388,441,	0,29357,
#Partially deleted in new
chr11	66616714	66626489	chr11:66616714-66626489	1	+	66616720	66626483	0	2	343,29,	0,9746,
#Deleted in new
chr11	66617128	66618532	chr11:66617128-66618532	0	+	66617128	66617128	8553170	2	422,37,	0,1367,
#Partially deleted in new
chr11	66617142	66624498	chr11:66617142-66624498	0	+	66617142	66617142	8553170	2	408,285,	0,7071,
#Partially deleted in new
chr11	66619044	66624222	chr11:66619044-66624222	0	+	66619044	66619044	8553170	3	460,93,9,	0,1801,5169,
#Partially deleted in new
chr11	66638616	66646469	chr11:66638616-66646469	3	+	66639711	66644132	0	4	136,424,691,443,	0,1083,4833,7410,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	66638666	66668374	chr11:66638666-66668374	1	+	66639711	66665965	0	3	86,424,2519,	0,1033,27189,
#Partially deleted in new
chr11	66638671	66646452	chr11:66638671-66646452	1	+	66639711	66644132	0	4	222,424,691,426,	0,1028,4778,7355,
#Partially deleted in new
chr11	66638697	66646468	chr11:66638697-66646468	1	+	66639711	66646046	0	3	55,424,442,	0,1002,7329,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	66638697	66641192	chr11:66638697-66641192	1	+	66639711	66640245	0	2	55,1493,	0,1002,
#Partially deleted in new
chr11	66638704	66644089	chr11:66638704-66644089	0	+	66639711	66644089	789624	4	48,424,79,231,	0,995,4745,5154,
#Partially deleted in new
chr11	66638715	66646468	chr11:66638715-66646468	0	+	66638715	66638715	8553170	3	37,285,442,	0,1123,7311,
#Partially deleted in new
chr11	66638717	66649930	chr11:66638717-66649930	1	+	66639711	66649776	789624	3	35,424,195,	0,982,11018,
#Partially deleted in new
chr11	66638719	66646439	chr11:66638719-66646439	1	+	66639711	66646046	0	3	174,424,413,	0,980,7307,
#Deleted in new
chr11	66638726	66640289	chr11:66638726-66640289	1	+	66639711	66640245	0	2	167,590,	0,973,
#Partially deleted in new
chr11	66638934	66646467	chr11:66638934-66646467	1	+	66639711	66644132	0	3	1189,691,441,	0,4515,7092,
#Deleted in new
chr11	66643749	66646468	chr11:66643749-66646468	0	+	66643749	66643749	8553170	3	391,110,442,	0,884,2277,
#Partially deleted in new
chr11	66664997	66677921	chr11:66664997-66677921	3	-	66668623	66677079	0	4	581,677,424,158,	0,3617,11670,12766,
#Partially deleted in new
chr11	66664997	66677748	chr11:66664997-66677748	1	-	66668623	66677079	0	3	581,677,1081,	0,3617,11670,
#Partially deleted in new
chr11	66665294	66677824	chr11:66665294-66677824	1	-	66665558	66677079	789624	3	284,424,61,	0,11373,12469,
#Deleted in new
chr11	66665453	66666495	chr11:66665453-66666495	0	-	66665453	66665453	8553170	2	207,224,	0,818,
#Partially deleted in new
chr11	66665547	66668685	chr11:66665547-66668685	0	-	66668623	66668685	789624	3	31,222,71,	0,724,3067,
#Partially deleted in new
chr11	66665905	66668835	chr11:66665905-66668835	0	-	66665905	66665905	8553170	2	588,221,	0,2709,
#Partially deleted in new
chr11	66668970	66677837	chr11:66668970-66677837	1	-	66670951	66677079	789624	4	321,48,424,74,	0,1965,7697,8793,
#Deleted in new
chr11	66675559	66677877	chr11:66675559-66677877	1	-	66676623	66677079	789624	2	1532,114,	0,2204,
#Partially deleted in new
chr11	66685247	66728959	chr11:66685247-66728959	3	-	66685870	66721240	0	38	857,43,174,221,51,76,143,197,85,139,245,375,205,131,261,90,225,264,147,91,203,757,138,871,154,303,159,118,188,113,116,81,92,174,152,179,91,219,	0,1150,1746,2179,2620,2756,2921,3405,3848,4557,4791,6036,7288,7722,7938,8524,8891,11029,13391,13744,14158,15278,16336,19350,20436,22268,22893,23654,25334,25669,28383,28843,29068,29974,30582,35836,36102,43493,
#Partially deleted in new
chr11	66685247	66728490	chr11:66685247-66728490	0	-	66685247	66685247	8553170	37	857,43,174,221,51,76,143,197,85,139,245,375,205,131,261,90,225,264,147,91,203,757,138,871,154,303,159,118,188,113,116,81,92,174,152,179,505,	0,1150,1746,2179,2620,2756,2921,3405,3848,4557,4791,6036,7288,7722,7938,8524,8891,11029,13391,13744,14158,15278,16336,19350,20436,22268,22893,23654,25334,25669,28383,28843,29068,29974,30582,35836,42738,
#Partially deleted in new
chr11	66685249	66721399	chr11:66685249-66721399	1	-	66685870	66721240	0	37	855,43,174,221,51,76,143,197,85,139,245,375,205,131,261,90,225,264,147,91,203,757,138,871,154,303,159,118,188,113,116,81,92,174,152,179,50,	0,1148,1744,2177,2618,2754,2919,3403,3846,4555,4789,6034,7286,7720,7936,8522,8889,11027,13389,13742,14156,15276,16334,19348,20434,22266,22891,23652,25332,25667,28381,28841,29066,29972,30580,35834,36100,
#Partially deleted in new
chr11	66685251	66721240	chr11:66685251-66721240	1	-	66686238	66721240	0	35	1189,174,221,51,76,143,197,85,139,245,375,205,131,261,90,225,264,147,91,203,757,138,871,154,303,159,118,188,113,116,81,92,174,152,157,	0,1742,2175,2616,2752,2917,3401,3844,4553,4787,6032,7284,7718,7934,8520,8887,11025,13387,13740,14154,15274,16332,19346,20432,22264,22889,23650,25330,25665,28379,28839,29064,29970,30578,35832,
#Partially deleted in new
chr11	66685651	66686517	chr11:66685651-66686517	0	-	66685651	66685651	8553170	2	453,120,	0,746,
#Partially deleted in new
chr11	66685828	66721370	chr11:66685828-66721370	1	-	66685870	66721240	789624	22	276,43,174,221,51,76,143,9,47,154,303,159,118,188,113,116,81,92,174,152,179,21,	0,569,1165,1598,2039,2175,2340,2824,19593,19855,21687,22312,23073,24753,25088,27802,28262,28487,29393,30001,35255,35521,
#Partially deleted in new
chr11	66686792	66687524	chr11:66686792-66687524	0	-	66686792	66686792	8553170	2	375,98,	0,634,
#Partially deleted in new
chr11	66687611	66688917	chr11:66687611-66688917	0	-	66687611	66687611	8553170	5	36,51,76,143,265,	0,256,392,557,1041,
#Partially deleted in new
chr11	66688820	66690358	chr11:66688820-66690358	0	-	66688820	66688820	8553170	4	29,85,139,320,	0,275,984,1218,
#Partially deleted in new
chr11	66694334	66698807	chr11:66694334-66698807	0	-	66694334	66694334	8553170	3	29,264,169,	0,1942,4304,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	66712719	66713009	chr11:66712719-66713009	3	-	66712719	66712719	8553170	1	290,	0,
#Partially deleted in new
chr11	66715353	66729226	chr11:66715353-66729226	0	-	66715353	66721240	789624	4	42,152,179,486,	0,476,5730,13387,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	66744450	66759084	chr11:66744450-66759084	0	+	66756501	66759084	789624	4	249,139,153,42,	0,3928,11902,14592,
#Partially deleted in new
chr11	66744617	66804194	chr11:66744617-66804194	0	+	66796304	66804194	789624	6	82,54,84,56,72,200,	0,14425,51663,56023,56413,59377,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr11	66744735	66843328	chr11:66744735-66843328	3	+	66744889	66843234	789624	17	184,139,153,54,110,84,56,72,193,151,147,122,111,99,79,221,160,	0,3643,11617,14307,43424,51545,55905,56295,59262,69129,71317,76907,77828,83530,93631,98113,98433,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr11	66744742	66843234	chr11:66744742-66843234	1	+	66744742	66843234	789624	17	177,139,153,54,110,84,56,72,193,151,147,122,111,99,79,221,66,	0,3636,11610,14300,43417,51538,55898,56288,59255,69122,71310,76900,77821,83523,93624,98106,98426,
#Partially deleted in new
chr11	66744770	66843290	chr11:66744770-66843290	1	+	66796304	66843234	789624	14	149,54,84,56,72,190,160,147,122,111,99,79,221,122,	0,14272,51510,55870,56260,59224,69085,71282,76872,77793,83495,93596,98078,98398,
#Partially deleted in new
chr11	66744773	66800686	chr11:66744773-66800686	0	+	66744773	66744773	8553170	6	146,54,372,110,84,46,	0,14269,17305,43386,51507,55867,
#Partially deleted in new
chr11	66744786	66843323	chr11:66744786-66843323	1	+	66759071	66843234	789624	15	133,54,110,84,56,72,196,151,147,122,111,99,76,221,155,	0,14256,43373,51494,55854,56244,59208,69078,71266,76856,77777,83479,93583,98062,98382,
#Partially deleted in new
chr11	66744819	66801077	chr11:66744819-66801077	0	+	66759071	66801042	789624	5	100,54,110,56,47,	0,14223,43340,55821,56211,
#Partially deleted in new
chr11	66744889	66843234	chr11:66744889-66843234	1	+	66744889	66843234	789624	16	30,139,54,110,84,56,72,193,151,147,122,111,99,79,221,66,	0,3489,14153,43270,51391,55751,56141,59108,68975,71163,76753,77674,83376,93477,97959,98279,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr11	66744891	66843290	chr11:66744891-66843290	1	+	66796304	66843234	789624	17	28,139,153,54,114,84,56,72,187,160,147,122,111,99,79,221,122,	0,3487,11461,14151,43268,51389,55749,56139,59106,68964,71161,76751,77672,83374,93475,97957,98277,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr11	66748393	66843324	chr11:66748393-66843324	1	+	66756501	66843234	789624	15	124,153,54,110,84,56,72,193,151,147,122,99,79,221,156,	0,7959,10649,39766,47887,52247,52637,55604,65471,67659,73249,79872,89973,94455,94775,
#Partially deleted in new
chr11	66759059	66843292	chr11:66759059-66843292	0	+	66759071	66796285	789624	14	37,114,84,56,72,190,160,147,122,111,99,79,221,124,	0,29100,37221,41581,41971,44935,54796,56993,62583,63504,69206,79307,83789,84109,
#Deleted in new
chr11	66761574	66762399	chr11:66761574-66762399	7	-	66761574	66761574	16724991	1	825,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	66771245	66771667	chr11:66771245-66771667	7	-	66771245	66771245	16724991	1	422,	0,
#Partially deleted in new
chr11	66788159	66804194	chr11:66788159-66804194	0	+	66788159	66801106	789624	5	110,84,56,131,200,	0,8121,12481,12871,15835,
#Partially deleted in new
chr11	66788159	66804194	chr11:66788159-66804194	0	+	66788159	66804194	789624	4	110,84,56,200,	0,8121,12481,15835,
#Partially deleted in new
chr11	66795896	66804168	chr11:66795896-66804168	0	+	66795896	66795896	8553170	4	468,56,72,174,	0,4744,5134,8098,
#Partially deleted in new
chr11	66815707	66828407	chr11:66815707-66828407	0	+	66815707	66815707	8553170	2	492,142,	0,12558,
#Partially deleted in new
chr11	66815833	66822660	chr11:66815833-66822660	0	+	66815833	66815833	8553170	3	366,122,97,	0,5809,6730,
#Partially deleted in new
chr11	66821642	66843273	chr11:66821642-66843273	0	+	66821642	66842996	789624	7	122,111,99,76,76,221,105,	0,921,6623,16727,17489,21206,21526,
#Partially deleted in new
chr11	66821713	66828797	chr11:66821713-66828797	0	+	66821713	66821713	8553170	4	51,111,99,82,	0,850,6552,7002,
#Deleted in new
chr11	66842834	66846526	chr11:66842834-66846526	0	+	66842834	66842834	8553170	5	1027,84,79,168,1361,	0,1121,1451,2034,2331,
#Deleted in new
chr11	66843411	66846546	chr11:66843411-66846546	3	+	66843455	66846095	789624	8	229,103,84,79,168,72,63,687,	0,347,544,874,1457,1754,2088,2448,
#Deleted in new
chr11	66843436	66846528	chr11:66843436-66846528	1	+	66843455	66846095	789624	7	204,103,84,79,168,72,669,	0,322,519,849,1432,1729,2423,
#Deleted in new
chr11	66843450	66846532	chr11:66843450-66846532	0	+	66843455	66843980	789624	8	190,103,80,79,168,72,63,673,	0,308,509,835,1418,1715,2049,2409,
#Deleted in new
chr11	66843509	66844138	chr11:66843509-66844138	0	+	66843509	66843509	8553170	3	131,103,179,	0,249,450,
#Deleted in new
chr11	66843534	66844018	chr11:66843534-66844018	0	+	66843534	66843534	8553170	2	106,260,	0,224,
#Deleted in new
chr11	66843647	66845008	chr11:66843647-66845008	0	+	66843647	66843647	8553170	4	214,80,79,140,	0,312,638,1221,
#Deleted in new
chr11	66843722	66846528	chr11:66843722-66846528	1	+	66844036	66846095	789624	7	139,80,79,168,72,63,669,	0,237,563,1146,1443,1777,2137,
#Deleted in new
chr11	66843783	66844759	chr11:66843783-66844759	0	+	66843783	66843783	8553170	4	78,80,79,63,	0,176,502,913,
#Deleted in new
chr11	66848232	66850341	chr11:66848232-66850341	1	-	66848898	66850297	789624	5	915,141,249,180,122,	0,997,1378,1704,1987,
#Partially deleted in new
chr11	66848512	66907901	chr11:66848512-66907901	1	-	66848898	66872159	0	21	635,141,249,180,245,250,241,157,222,90,145,183,163,119,152,118,146,166,185,136,81,	0,717,1098,1424,1707,2161,2527,3277,3926,4234,4726,15261,17674,20333,21789,22262,22539,22802,23174,23511,59308,
#Partially deleted in new
chr11	66848524	66958376	chr11:66848524-66958376	3	-	66848898	66872159	0	22	623,141,249,180,245,250,241,157,222,90,145,183,163,119,152,118,146,166,185,136,39,55,	0,705,1086,1412,1695,2149,2515,3265,3914,4222,4714,15249,17662,20321,21777,22250,22527,22790,23162,23499,103905,109797,
#Partially deleted in new
chr11	66848525	66958376	chr11:66848525-66958376	1	-	66848898	66872159	0	23	622,141,249,180,245,250,241,157,222,90,145,183,163,119,152,118,146,166,185,136,39,188,55,	0,704,1085,1411,1694,2148,2514,3264,3913,4221,4713,15248,17661,20320,21776,22249,22526,22789,23161,23498,103904,105723,109796,
#Deleted in new
chr11	66848557	66849887	chr11:66848557-66849887	0	-	66848557	66848557	8553170	3	590,141,277,	0,672,1053,
#Deleted in new
chr11	66848898	66849271	chr11:66848898-66849271	0	-	66848898	66848898	8553170	2	249,42,	0,331,
#Deleted in new
chr11	66850853	66852962	chr11:66850853-66852962	0	-	66850853	66850853	8553170	5	70,241,157,222,216,	0,186,936,1585,1893,
#Deleted in new
chr11	66856646	66857790	chr11:66856646-66857790	0	+	66856646	66856646	8553170	2	218,56,	0,1088,
#Deleted in new
chr11	66857117	66860475	chr11:66857117-66860475	1	+	66857744	66860371	789624	3	179,1142,229,	0,617,3129,
#Deleted in new
chr11	66857501	66860475	chr11:66857501-66860475	3	+	66857744	66860195	789624	2	1592,839,	0,2135,
#Deleted in new
chr11	66857882	66860475	chr11:66857882-66860475	0	-	66857882	66857882	8553170	3	387,21,213,	0,453,2380,
#Partially deleted in new
chr11	66860417	66958376	chr11:66860417-66958376	1	-	66860447	66872039	789624	12	252,183,163,119,152,118,146,166,185,136,39,55,	0,3356,5769,8428,9884,10357,10634,10897,11269,11606,92012,97904,
#Partially deleted in new
chr11	66860447	66872039	chr11:66860447-66872039	1	-	66860447	66872039	789624	10	222,183,163,119,152,118,146,166,185,16,	0,3326,5739,8398,9854,10327,10604,10867,11239,11576,
#Partially deleted in new
chr11	66871313	66957902	chr11:66871313-66957902	0	-	66871313	66871313	8553170	5	167,185,136,39,163,	0,373,710,81116,86426,
#Partially deleted in new
chr11	66871371	66958370	chr11:66871371-66958370	0	-	66871371	66871371	8553170	6	109,185,136,39,188,49,	0,315,652,81058,82877,86950,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	66919761	66919823	chr11:66919761-66919823	3	+	66919761	66919761	8553170	1	62,	0,
#Deleted in new
chr11	66934433	66934506	chr11:66934433-66934506	3	-	66934433	66934433	5263520	1	73,	0,
#Partially deleted in new
chr11	66952295	66958344	chr11:66952295-66958344	0	-	66952295	66952295	8553170	4	173,188,128,23,	0,1953,5573,6026,
#Partially deleted in new
chr11	66952429	66954409	chr11:66952429-66954409	0	-	66952429	66952429	8553170	2	39,161,	0,1819,
#Deleted in new
chr11	66975276	66977004	chr11:66975276-66977004	3	+	66975362	66976251	789624	2	362,825,	0,903,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	67006777	67050863	chr11:67006777-67050863	3	+	67030144	67048757	789624	11	678,244,172,45,57,194,393,216,121,134,2280,	0,3101,4045,15091,23344,27867,33033,36860,37815,38966,41806,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	67022718	67048939	chr11:67022718-67048939	1	+	67030144	67048757	789624	8	207,57,194,393,216,121,134,356,	0,7403,11926,17092,20919,21874,23025,25865,
#Partially deleted in new
chr11	67023344	67049013	chr11:67023344-67049013	1	+	67030144	67048757	789624	8	116,57,194,393,216,121,134,430,	0,6777,11300,16466,20293,21248,22399,25239,
#Partially deleted in new
chr11	67023385	67040205	chr11:67023385-67040205	0	+	67023385	67023385	8553170	3	75,57,395,	0,6736,16425,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	67026621	67032905	chr11:67026621-67032905	0	+	67026621	67026621	8553170	2	3557,2471,	0,3813,
#Partially deleted in new
chr11	67027559	67039876	chr11:67027559-67039876	0	+	67030144	67039876	789624	4	276,57,194,66,	0,2562,7085,12251,
#Partially deleted in new
chr11	67030099	67039931	chr11:67030099-67039931	0	+	67030099	67030099	8553170	4	79,125,194,121,	0,335,4545,9711,
#Deleted in new
chr11	67045642	67045708	chr11:67045642-67045708	3	+	67045642	67045642	5263520	1	66,	0,
#Partially deleted in new
chr11	67056817	67072013	chr11:67056817-67072013	3	+	67056902	67071602	789624	5	217,88,110,135,579,	0,9078,9920,13607,14617,
#Partially deleted in new
chr11	67056859	67070517	chr11:67056859-67070517	0	+	67056859	67056859	8553170	4	175,88,110,229,	0,9036,9878,13429,
#Partially deleted in new
chr11	67056888	67071691	chr11:67056888-67071691	1	+	67056902	67071602	789624	3	146,135,257,	0,13536,14546,
#Partially deleted in new
chr11	67119268	67257665	chr11:67119268-67257665	1	+	67121316	67252726	0	21	781,125,139,79,47,179,107,94,154,116,127,395,84,270,132,90,261,164,159,216,2792,	0,1965,60810,62051,62577,88241,96071,96587,98462,100019,108768,112297,123740,125920,126716,129012,130817,133425,134184,134934,135605,
#Partially deleted in new
chr11	67119686	67258087	chr11:67119686-67258087	3	+	67121316	67255055	0	21	363,125,139,79,47,179,107,94,154,116,127,395,84,270,132,90,713,164,159,216,3214,	0,1547,60392,61633,62159,87823,95653,96169,98044,99601,108350,111879,123322,125502,126298,128594,130399,133007,133766,134516,135187,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	67119890	67149207	chr11:67119890-67149207	0	+	67119890	67119890	8553170	4	159,125,168,153,	0,1343,23313,29164,
#Partially deleted in new
chr11	67119975	67180453	chr11:67119975-67180453	0	+	67119975	67119975	8553170	3	74,125,375,	0,1258,60103,
#Partially deleted in new
chr11	67121268	67255062	chr11:67121268-67255062	1	+	67180087	67255055	789624	21	90,122,139,79,47,179,107,94,154,116,127,395,84,270,132,90,713,164,159,216,189,	0,10683,58810,60051,60577,86241,94071,94587,96462,98019,106768,110297,121740,123920,124716,127012,128817,131425,132184,132934,133605,
#Partially deleted in new
chr11	67195568	67196126	chr11:67195568-67196126	5	-	67195568	67195568	16724991	1	558,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	67195912	67197167	chr11:67195912-67197167	7	-	67195912	67195912	16724991	1	1255,	0,
#Partially deleted in new
chr11	67207567	67215673	chr11:67207567-67215673	0	+	67207567	67207567	8553170	2	121,334,	0,7772,
#Partially deleted in new
chr11	67207601	67257661	chr11:67207601-67257661	0	+	67207601	67207601	8553170	16	87,107,94,129,116,127,395,84,270,132,90,713,164,159,216,2788,	0,7738,8254,10154,11686,20435,23964,35407,37587,38383,40679,42484,45092,45851,46601,47272,
#Partially deleted in new
chr11	67215910	67256374	chr11:67215910-67256374	0	+	67215910	67215910	8553170	14	39,154,116,127,395,84,270,132,90,713,164,159,216,1501,	0,1820,3377,12126,15655,27098,29278,30074,32370,34175,36783,37542,38292,38963,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	67217542	67219688	chr11:67217542-67219688	0	+	67217542	67217542	8553170	2	342,401,	0,1745,
#Partially deleted in new
chr11	67231764	67248379	chr11:67231764-67248379	0	+	67231764	67231764	8553170	4	196,270,132,99,	0,13424,14220,16516,
#Partially deleted in new
chr11	67240046	67256373	chr11:67240046-67256373	1	+	67240207	67255055	0	10	323,84,270,132,90,713,164,159,216,1500,	0,2962,5142,5938,8234,10039,12647,13406,14156,14827,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	67240300	67243816	chr11:67240300-67243816	0	+	67240300	67240300	8553170	3	69,84,310,	0,2708,3206,
#Partially deleted in new
chr11	67245077	67248605	chr11:67245077-67248605	0	+	67245077	67245077	8553170	4	381,132,90,61,	0,907,3203,3467,
#Partially deleted in new
chr11	67245538	67248368	chr11:67245538-67248368	0	+	67245538	67245538	8553170	2	578,88,	0,2742,
#Deleted in new
chr11	67252337	67257670	chr11:67252337-67257670	0	+	67252337	67252337	8553170	4	520,159,216,2797,	0,1115,1865,2536,
#Partially deleted in new
chr11	67266409	67286556	chr11:67266409-67286556	3	+	67266699	67285450	0	21	403,77,74,102,75,62,52,92,100,79,131,95,108,67,101,67,96,163,137,114,1271,	0,10862,12790,13008,13216,13429,14322,14683,15049,15240,15412,15861,16025,16342,16718,17297,17444,17801,18437,18665,18876,
#Partially deleted in new
chr11	67266480	67286536	chr11:67266480-67286536	1	+	67266699	67286524	789624	14	332,77,74,102,75,62,52,92,100,79,131,95,43,144,	0,10791,12719,12937,13145,13358,14251,14612,14978,15169,15341,15790,15954,19912,
#Partially deleted in new
chr11	67270937	67279519	chr11:67270937-67279519	0	+	67270937	67270937	8553170	4	71,77,74,102,	0,6334,8262,8480,
#Partially deleted in new
chr11	67276536	67286555	chr11:67276536-67286555	0	+	67276536	67276536	8553170	17	812,74,102,75,62,453,100,79,721,67,101,67,96,163,137,114,1270,	0,2663,2881,3089,3302,4195,4922,5113,5285,6215,6591,7170,7317,7674,8310,8538,8749,
#Partially deleted in new
chr11	67279473	67286372	chr11:67279473-67286372	0	+	67279473	67279473	8553170	4	46,75,62,317,	0,152,365,6582,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	67280193	67284622	chr11:67280193-67284622	0	+	67280193	67280193	8553170	6	991,100,79,721,67,1495,	0,1265,1456,1628,2558,2934,
#Deleted in new
chr11	67281458	67282066	chr11:67281458-67282066	0	+	67281458	67281458	8553170	3	100,79,245,	0,191,363,
#Deleted in new
chr11	67281508	67284369	chr11:67281508-67284369	0	+	67281508	67281508	8553170	9	50,79,131,95,108,67,101,96,159,	0,141,313,762,926,1243,1619,2345,2702,
#Deleted in new
chr11	67281683	67283959	chr11:67281683-67283959	0	+	67281683	67281683	8553170	7	45,131,272,67,101,67,106,	0,138,587,1068,1444,2023,2170,
#Partially deleted in new
chr11	67281875	67285137	chr11:67281875-67285137	0	+	67281875	67281875	8553170	8	77,108,67,101,67,96,163,291,	0,559,876,1252,1831,1978,2335,2971,
#Deleted in new
chr11	67282124	67283231	chr11:67282124-67283231	0	+	67282124	67282124	8553170	3	418,67,104,	0,627,1003,
#Deleted in new
chr11	67282780	67284171	chr11:67282780-67284171	0	+	67282780	67282780	8553170	4	38,101,67,318,	0,347,926,1073,
#Deleted in new
chr11	67283174	67284323	chr11:67283174-67284323	0	+	67283174	67283174	8553170	3	54,243,113,	0,532,1036,
#Partially deleted in new
chr11	67284270	67285591	chr11:67284270-67285591	0	+	67284270	67284270	8553170	3	103,342,306,	0,576,1015,
#Partially deleted in new
chr11	67288546	67302481	chr11:67288546-67302481	1	+	67290356	67302332	789624	15	1004,136,125,46,144,190,67,82,62,131,158,117,164,92,363,	0,1531,1775,2929,3056,3444,10511,10983,11280,11446,12443,12735,12941,13185,13572,
#Partially deleted in new
chr11	67289290	67302483	chr11:67289290-67302483	3	+	67289460	67302332	789624	15	260,136,125,46,144,190,67,82,62,131,158,117,164,92,365,	0,787,1031,2185,2312,2700,9767,10239,10536,10702,11699,11991,12197,12441,12828,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	67289299	67291651	chr11:67289299-67291651	0	+	67289299	67289299	8553170	5	251,136,125,930,49,	0,778,1022,1292,2303,
#Partially deleted in new
chr11	67289347	67302483	chr11:67289347-67302483	1	+	67290356	67302332	789624	16	203,137,136,125,46,144,190,67,82,62,131,158,117,164,92,365,	0,481,730,974,2128,2255,2643,9710,10182,10479,10645,11642,11934,12140,12384,12771,
#Deleted in new
chr11	67289347	67290540	chr11:67289347-67290540	0	+	67289347	67289347	8553170	3	203,136,219,	0,730,974,
#Partially deleted in new
chr11	67289401	67302485	chr11:67289401-67302485	1	+	67290356	67302332	789624	14	149,369,46,144,190,67,82,62,131,158,117,164,92,367,	0,676,2074,2201,2589,9656,10128,10425,10591,11588,11880,12086,12330,12717,
#Partially deleted in new
chr11	67289933	67292037	chr11:67289933-67292037	0	+	67290356	67292037	789624	5	280,125,46,144,47,	0,388,1542,1669,2057,
#Partially deleted in new
chr11	67290366	67300034	chr11:67290366-67300034	0	+	67290366	67290366	8553170	7	80,46,144,190,554,62,42,	0,1109,1236,1624,8691,9460,9626,
#Partially deleted in new
chr11	67290411	67292174	chr11:67290411-67292174	0	+	67290411	67290411	8553170	3	35,271,184,	0,1064,1579,
#Partially deleted in new
chr11	67292137	67300302	chr11:67292137-67300302	0	+	67292137	67292137	8553170	5	43,67,82,62,310,	0,6920,7392,7689,7855,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	67297890	67302483	chr11:67297890-67302483	0	+	67297890	67297890	8553170	2	1731,278,	0,4315,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	67297932	67302483	chr11:67297932-67302483	0	+	67297932	67297932	8553170	8	1679,62,131,158,117,164,92,365,	0,1894,2060,3057,3349,3555,3799,4186,
#Deleted in new
chr11	67298629	67302483	chr11:67298629-67302483	0	+	67298629	67298629	8553170	8	992,62,131,158,117,164,92,365,	0,1197,1363,2360,2652,2858,3102,3489,
#Deleted in new
chr11	67299422	67302483	chr11:67299422-67302483	0	+	67299422	67299422	8553170	2	199,278,	0,2783,
#Deleted in new
chr11	67299991	67302451	chr11:67299991-67302451	0	+	67299991	67299991	8553170	4	132,158,542,333,	0,998,1290,2127,
#Deleted in new
chr11	67300029	67301128	chr11:67300029-67301128	0	+	67300029	67300127	789624	2	470,139,	0,960,
#Deleted in new
chr11	67300775	67302484	chr11:67300775-67302484	1	+	67300966	67302332	789624	5	372,117,164,92,366,	0,506,712,956,1343,
#Deleted in new
chr11	67301472	67302484	chr11:67301472-67302484	0	+	67301472	67301472	8553170	3	179,35,366,	0,316,646,
#Partially deleted in new
chr11	67303447	67312600	chr11:67303447-67312600	3	+	67303625	67311887	789624	14	244,38,235,125,72,66,189,94,129,47,147,201,274,1010,	0,670,1325,3390,3594,3923,4101,4398,4726,4964,5949,6320,6618,8143,
#Partially deleted in new
chr11	67303477	67312605	chr11:67303477-67312605	1	+	67307015	67311887	789624	13	214,107,231,276,66,189,94,129,47,147,201,274,1015,	0,571,1299,3360,3893,4071,4368,4696,4934,5919,6290,6588,8113,
#Partially deleted in new
chr11	67303479	67312602	chr11:67303479-67312602	1	+	67303625	67311887	789624	10	212,38,235,125,72,66,189,61,36,1012,	0,638,1293,3358,3562,3891,4069,4366,6824,8111,
#Partially deleted in new
chr11	67303529	67307074	chr11:67303529-67307074	0	+	67303625	67304832	789624	4	162,235,125,33,	0,1243,3308,3512,
#Partially deleted in new
chr11	67303625	67312592	chr11:67303625-67312592	0	+	67303625	67310170	789624	14	66,38,235,125,72,66,189,94,129,47,147,201,176,1002,	0,492,1147,3212,3416,3745,3923,4220,4548,4786,5771,6142,6538,7965,
#Deleted in new
chr11	67303708	67304869	chr11:67303708-67304869	0	+	67303708	67303708	8553170	2	447,97,	0,1064,
#Partially deleted in new
chr11	67304122	67309543	chr11:67304122-67309543	0	+	67304122	67309543	789624	9	33,235,125,72,66,94,129,47,147,	0,650,2715,2919,3248,3723,4051,4289,5274,
#Partially deleted in new
chr11	67307572	67309526	chr11:67307572-67309526	0	+	67307572	67307572	8553170	4	367,129,47,130,	0,601,839,1824,
#Partially deleted in new
chr11	67307656	67310169	chr11:67307656-67310169	0	+	67307656	67310169	789624	6	81,94,129,47,201,104,	0,189,517,755,2111,2409,
#Partially deleted in new
chr11	67309229	67310098	chr11:67309229-67310098	0	+	67309229	67309229	8553170	3	314,201,33,	0,538,836,
#Partially deleted in new
chr11	67311624	67312607	chr11:67311624-67312607	0	+	67311624	67311624	8553170	2	39,225,	0,758,
#Partially deleted in new
chr11	67317870	67391434	chr11:67317870-67391434	0	+	67317870	67317870	789624	4	327,64,137,37,	0,3399,69664,73527,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	67350776	67353579	chr11:67350776-67353579	1	-	67351994	67352764	789624	4	1243,112,90,41,	0,1914,2211,2762,
#Partially deleted in new
chr11	67351547	67353546	chr11:67351547-67353546	3	-	67351994	67353399	789624	4	472,112,90,244,	0,1143,1440,1755,
#Partially deleted in new
chr11	67351547	67353518	chr11:67351547-67353518	1	-	67351994	67352764	789624	4	472,112,90,225,	0,1143,1440,1746,
#Partially deleted in new
chr11	67351547	67356972	chr11:67351547-67356972	1	-	67351994	67352764	789624	4	472,112,90,230,	0,1143,1440,5195,
#Partially deleted in new
chr11	67351547	67353078	chr11:67351547-67353078	0	-	67351547	67351547	8553170	2	472,388,	0,1143,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	67351552	67353561	chr11:67351552-67353561	0	-	67351552	67351552	8553170	2	1525,268,	0,1741,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	67351564	67353490	chr11:67351564-67353490	0	-	67351564	67351564	8553170	2	1513,188,	0,1738,
#Partially deleted in new
chr11	67351571	67373584	chr11:67351571-67373584	3	-	67351994	67373539	789624	4	448,112,90,61,	0,1119,1416,21952,
#Partially deleted in new
chr11	67351607	67353514	chr11:67351607-67353514	1	-	67351966	67353399	789624	3	412,90,212,	0,1380,1695,
#Partially deleted in new
chr11	67351808	67353534	chr11:67351808-67353534	1	-	67351994	67352764	789624	4	211,112,90,171,	0,882,1179,1555,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	67352458	67353595	chr11:67352458-67353595	0	-	67352458	67352458	8553170	3	344,173,41,	0,529,1096,
#Deleted in new
chr11	67352531	67353525	chr11:67352531-67353525	0	-	67352531	67352531	8553170	2	271,538,	0,456,
#Deleted in new
chr11	67352892	67353534	chr11:67352892-67353534	0	-	67352892	67352892	8553170	2	219,324,	0,318,
#Deleted in new
chr11	67353628	67354348	chr11:67353628-67354348	3	+	67353628	67353628	8553170	2	35,492,	0,228,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	67362413	67362708	chr11:67362413-67362708	3	+	67362413	67362413	8553170	1	295,	0,
#Deleted in new
chr11	67364167	67373737	chr11:67364167-67373737	3	-	67365135	67373539	789624	3	1463,167,214,	0,3292,9356,
#Deleted in new
chr11	67364961	67374177	chr11:67364961-67374177	1	-	67365135	67367612	789624	3	669,167,131,	0,2498,9085,
#Deleted in new
chr11	67374415	67374932	chr11:67374415-67374932	3	+	67374415	67374415	8553170	1	517,	0,
#Partially deleted in new
chr11	67376012	67392074	chr11:67376012-67392074	0	+	67392044	67392074	789624	3	98,137,677,	0,11522,15385,
#Partially deleted in new
chr11	67391704	67396022	chr11:67391704-67396022	0	+	67391704	67391704	8553170	7	186,71,129,115,100,110,111,	0,456,949,1791,1986,4011,4207,
#Partially deleted in new
chr11	67391951	67398409	chr11:67391951-67398409	3	+	67392044	67397559	0	11	127,71,129,115,100,110,110,65,138,208,946,	0,209,702,1544,1739,3764,3960,4159,4311,5227,5512,
#Partially deleted in new
chr11	67391957	67397424	chr11:67391957-67397424	0	+	67392044	67392769	789624	7	121,129,115,110,65,138,246,	0,696,1538,3954,4153,4305,5221,
#Partially deleted in new
chr11	67391957	67396312	chr11:67391957-67396312	0	+	67392044	67396312	789624	9	121,71,129,73,100,110,110,65,50,	0,203,696,1580,1733,3758,3954,4153,4305,
#Partially deleted in new
chr11	67391975	67395807	chr11:67391975-67395807	0	+	67392044	67393730	789624	6	103,71,129,115,68,92,	0,185,678,1520,1747,3740,
#Partially deleted in new
chr11	67391982	67393783	chr11:67391982-67393783	0	+	67391982	67391982	8553170	4	249,129,115,93,	0,671,1513,1708,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	67392881	67396315	chr11:67392881-67396315	0	+	67392881	67392881	8553170	5	729,100,110,264,53,	0,809,2834,3030,3381,
#Partially deleted in new
chr11	67393304	67397390	chr11:67393304-67397390	0	+	67393304	67393304	8553170	7	306,100,110,110,61,138,212,	0,386,2411,2607,2806,2958,3874,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	67395209	67395311	chr11:67395209-67395311	3	-	67395209	67395209	8553170	1	102,	0,
#Deleted in new
chr11	67395669	67398410	chr11:67395669-67398410	0	+	67395669	67395669	8553170	6	156,110,65,138,208,947,	0,242,441,593,1509,1794,
#Partially deleted in new
chr11	67398182	67401793	chr11:67398182-67401793	1	-	67398534	67401782	0	7	463,135,224,105,231,165,66,	0,539,757,1378,2506,2885,3545,
#Partially deleted in new
chr11	67398200	67401931	chr11:67398200-67401931	3	-	67398534	67401782	0	7	445,135,224,105,231,132,204,	0,521,739,1360,2488,2867,3527,
#Partially deleted in new
chr11	67398200	67401604	chr11:67398200-67401604	0	-	67398200	67398200	8553170	6	445,135,224,105,231,537,	0,521,739,1360,2488,2867,
#Partially deleted in new
chr11	67398200	67401577	chr11:67398200-67401577	0	-	67398200	67398200	8553170	7	445,135,224,105,231,132,193,	0,521,739,1360,2488,2867,3184,
#Partially deleted in new
chr11	67398430	67401871	chr11:67398430-67401871	1	-	67398534	67401782	0	6	215,135,224,105,231,144,	0,291,509,1130,2258,3297,
#Deleted in new
chr11	67398581	67399606	chr11:67398581-67399606	0	-	67398581	67398581	8553170	3	64,442,46,	0,140,979,
#Partially deleted in new
chr11	67398739	67401788	chr11:67398739-67401788	0	-	67398739	67401782	789624	5	117,224,231,132,61,	0,200,1949,2328,2988,
#Partially deleted in new
chr11	67398935	67407264	chr11:67398935-67407264	0	-	67398935	67398935	8553170	5	228,105,231,132,186,	0,625,1753,2132,8143,
#Deleted in new
chr11	67400715	67401815	chr11:67400715-67401815	0	-	67400715	67400715	8553170	2	484,88,	0,1012,
#Partially deleted in new
chr11	67400854	67421181	chr11:67400854-67421181	0	-	67400854	67421134	789624	4	65,132,154,203,	0,213,18589,20124,
#Partially deleted in new
chr11	67400858	67421183	chr11:67400858-67421183	0	-	67400858	67421134	789624	4	61,132,190,205,	0,209,18549,20120,
#Deleted in new
chr11	67403914	67410089	chr11:67403914-67410089	1	+	67404202	67409540	789624	9	26,164,100,108,107,111,66,155,683,	0,276,1170,1484,1680,1992,2712,5064,5492,
#Deleted in new
chr11	67404122	67406932	chr11:67404122-67406932	0	+	67404122	67404122	8553170	6	232,100,108,107,111,306,	0,962,1276,1472,1784,2504,
#Deleted in new
chr11	67404128	67410089	chr11:67404128-67410089	0	+	67404202	67406704	789624	9	226,100,108,107,115,112,190,155,683,	0,956,1270,1466,1774,2498,2698,4850,5278,
#Deleted in new
chr11	67404186	67410088	chr11:67404186-67410088	1	+	67404202	67409540	789624	8	168,100,108,107,111,66,155,682,	0,898,1212,1408,1720,2440,4792,5220,
#Deleted in new
chr11	67404188	67410058	chr11:67404188-67410058	3	+	67404202	67409754	789624	9	166,100,108,107,115,66,190,155,652,	0,896,1210,1406,1714,2438,2638,4790,5218,
#Deleted in new
chr11	67404930	67406661	chr11:67404930-67406661	0	+	67404930	67404930	8553170	5	254,108,107,115,35,	0,468,664,972,1696,
#Deleted in new
chr11	67405045	67406088	chr11:67405045-67406088	0	+	67405045	67405045	8553170	3	139,108,494,	0,353,549,
#Deleted in new
chr11	67405247	67410088	chr11:67405247-67410088	0	+	67405247	67405247	8553170	3	259,3539,682,	0,347,4159,
#Deleted in new
chr11	67408866	67410089	chr11:67408866-67410089	0	+	67408866	67408866	8553170	3	267,48,218,	0,540,1005,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	67414967	67415486	chr11:67414967-67415486	0	+	67414967	67414967	8553170	2	249,119,	0,400,
#Deleted in new
chr11	67415360	67418521	chr11:67415360-67418521	0	+	67415360	67415360	8553170	4	157,27,271,91,	0,815,2046,3070,
#Partially deleted in new
chr11	67415677	67425607	chr11:67415677-67425607	3	+	67418760	67424601	789624	9	86,271,90,488,175,86,232,281,2233,	0,1729,2753,3078,3809,4075,4931,5261,7697,
#Partially deleted in new
chr11	67415677	67424684	chr11:67415677-67424684	1	+	67416199	67424601	789624	11	86,27,271,90,488,175,86,69,85,281,1310,	0,498,1729,2753,3078,3809,4075,4931,5078,5261,7697,
#Partially deleted in new
chr11	67415677	67425237	chr11:67415677-67425237	0	+	67415677	67415677	8553170	5	86,1502,90,443,248,	0,498,2753,3078,9312,
#Partially deleted in new
chr11	67416085	67425605	chr11:67416085-67425605	1	+	67416199	67424601	789624	9	117,271,90,488,175,86,232,281,2231,	0,1321,2345,2670,3401,3667,4523,4853,7289,
#Partially deleted in new
chr11	67416195	67425605	chr11:67416195-67425605	0	+	67416195	67416195	8553170	8	1482,90,488,175,86,232,281,2231,	0,2235,2560,3291,3557,4413,4743,7179,
#Partially deleted in new
chr11	67428459	67431582	chr11:67428459-67431582	0	+	67428459	67428459	8553170	4	164,121,69,215,	0,660,1067,2908,
#Partially deleted in new
chr11	67428482	67432985	chr11:67428482-67432985	0	+	67428545	67432360	789624	9	141,41,121,69,148,137,58,101,34,	0,499,637,1044,2885,3873,4117,4254,4469,
#Partially deleted in new
chr11	67428493	67432981	chr11:67428493-67432981	0	+	67428493	67428493	8553170	7	130,41,121,69,58,101,30,	0,488,626,1033,4106,4243,4458,
#Partially deleted in new
chr11	67428493	67431403	chr11:67428493-67431403	0	+	67428545	67431403	789624	5	130,110,121,69,36,	0,419,626,1033,2874,
#Partially deleted in new
chr11	67428497	67432995	chr11:67428497-67432995	0	+	67432821	67432995	789624	5	126,121,69,101,44,	0,622,1029,4239,4454,
#Partially deleted in new
chr11	67428500	67435408	chr11:67428500-67435408	3	+	67428545	67435169	789624	15	123,41,121,69,148,58,101,91,91,108,63,78,108,113,420,	0,481,619,1026,2867,4099,4236,4451,4625,4839,5494,5697,5876,6081,6488,
#Partially deleted in new
chr11	67428503	67435344	chr11:67428503-67435344	0	+	67428545	67432360	789624	16	120,41,121,69,148,140,58,101,91,91,108,63,78,108,113,356,	0,478,616,1023,2864,3849,4096,4233,4448,4622,4836,5491,5694,5873,6078,6485,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	67428504	67435401	chr11:67428504-67435401	0	+	67428504	67428504	8553170	8	736,3131,101,243,108,281,108,820,	0,1022,4232,4447,4835,5490,5872,6077,
#Partially deleted in new
chr11	67429526	67435018	chr11:67429526-67435018	0	+	67429526	67433000	789624	11	69,148,58,91,91,108,63,78,108,113,30,	0,1841,3073,3425,3599,3813,4468,4671,4850,5055,5462,
#Deleted in new
chr11	67431366	67435399	chr11:67431366-67435399	3	-	67431366	67431366	8553170	2	127,343,	0,3690,
#Deleted in new
chr11	67432239	67432815	chr11:67432239-67432815	0	+	67432239	67432239	8553170	2	418,79,	0,497,
#Deleted in new
chr11	67432775	67434644	chr11:67432775-67434644	0	+	67432775	67432775	8553170	7	62,91,322,63,78,108,63,	0,176,350,1219,1422,1601,1806,
#Deleted in new
chr11	67433443	67434954	chr11:67433443-67434954	0	+	67433443	67433443	8553170	4	4,63,78,578,	0,551,754,933,
#Deleted in new
chr11	67435509	67438067	chr11:67435509-67438067	3	-	67435732	67437619	789624	2	841,451,	0,2107,
#Deleted in new
chr11	67435509	67443484	chr11:67435509-67443484	0	-	67440457	67442628	789624	11	2992,279,58,146,150,120,182,130,123,203,81,	0,3161,4276,4608,4825,5615,5823,6223,6456,6918,7894,
#Deleted in new
chr11	67438047	67443821	chr11:67438047-67443821	3	-	67438375	67442628	789624	12	454,279,58,146,105,120,182,130,123,203,62,69,	0,623,1738,2070,2287,3077,3285,3685,3918,4380,5356,5705,
#Deleted in new
chr11	67438075	67443512	chr11:67438075-67443512	1	-	67438375	67442628	789624	11	426,279,58,146,105,120,182,130,123,203,109,	0,595,1710,2042,2259,3049,3257,3657,3890,4352,5328,
#Deleted in new
chr11	67438081	67443456	chr11:67438081-67443456	0	-	67440743	67442628	789624	12	420,279,58,146,105,135,120,182,130,123,203,53,	0,589,1704,2036,2253,2620,3043,3251,3651,3884,4346,5322,
#Deleted in new
chr11	67438282	67440199	chr11:67438282-67440199	0	-	67438282	67438282	8553170	4	219,279,58,59,	0,388,1503,1858,
#Deleted in new
chr11	67440230	67440521	chr11:67440230-67440521	0	-	67440230	67440230	8553170	2	33,187,	0,104,
#Deleted in new
chr11	67440743	67443512	chr11:67440743-67443512	1	-	67440743	67442628	789624	7	93,120,182,130,123,203,109,	0,381,589,989,1222,1684,2660,
#Deleted in new
chr11	67440790	67443472	chr11:67440790-67443472	0	-	67440790	67440790	8553170	6	454,182,130,123,203,69,	0,542,942,1175,1637,2613,
#Deleted in new
chr11	67441235	67443487	chr11:67441235-67443487	0	-	67441235	67441235	8553170	4	627,123,203,84,	0,730,1192,2168,
#Deleted in new
chr11	67441768	67443821	chr11:67441768-67443821	0	-	67441768	67442628	789624	5	94,123,203,62,69,	0,197,659,1635,1984,
#Deleted in new
chr11	67451300	67452729	chr11:67451300-67452729	3	-	67451311	67452724	789624	1	1429,	0,
#Partially deleted in new
chr11	67452405	67455699	chr11:67452405-67455699	0	+	67452405	67452405	8553170	2	295,266,	0,3028,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	67452414	67459228	chr11:67452414-67459228	1	+	67456136	67458659	789624	7	232,81,113,144,110,148,598,	0,3294,3691,3884,5158,5956,6216,
#Partially deleted in new
chr11	67452418	67455790	chr11:67452418-67455790	0	+	67452418	67452418	8553170	2	407,357,	0,3015,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	67452435	67453440	chr11:67452435-67453440	0	+	67452435	67452435	8553170	2	211,703,	0,302,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	67452737	67453669	chr11:67452737-67453669	0	+	67452737	67452737	8553170	2	244,109,	0,823,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	67455346	67460313	chr11:67455346-67460313	3	+	67455423	67458659	789624	6	443,31,144,110,148,1683,	0,841,952,2226,3024,3284,
#Partially deleted in new
chr11	67455402	67457649	chr11:67455402-67457649	0	+	67455423	67456140	789624	4	387,99,119,77,	0,717,896,2170,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	67461709	67469234	chr11:67461709-67469234	3	-	67464613	67469192	789624	7	2987,54,45,77,90,65,216,	0,3093,3346,5602,5791,6318,7309,
#Partially deleted in new
chr11	67464352	67469239	chr11:67464352-67469239	0	-	67465094	67469192	789624	7	344,54,212,77,90,65,221,	0,450,703,2959,3148,3675,4666,
#Partially deleted in new
chr11	67464357	67467590	chr11:67464357-67467590	0	-	67464613	67467590	789624	4	339,45,77,90,	0,698,2954,3143,
#Deleted in new
chr11	67464357	67465108	chr11:67464357-67465108	0	-	67464357	67464357	8553170	2	304,306,	0,445,
#Partially deleted in new
chr11	67464391	67469250	chr11:67464391-67469250	1	-	67464613	67469192	789624	6	305,54,77,90,65,232,	0,411,2920,3109,3636,4627,
#Deleted in new
chr11	67464463	67465333	chr11:67464463-67465333	0	-	67464463	67464463	8553170	3	233,54,278,	0,339,592,
#Partially deleted in new
chr11	67464504	67467534	chr11:67464504-67467534	0	-	67467297	67467534	789624	5	192,54,212,224,34,	0,298,551,2660,2996,
#Partially deleted in new
chr11	67464536	67469268	chr11:67464536-67469268	0	-	67467368	67469192	789624	6	160,54,77,63,76,250,	0,266,2775,2964,3480,4482,
#Partially deleted in new
chr11	67464622	67468199	chr11:67464622-67468199	0	-	67464622	67464622	8553170	6	74,54,45,77,90,172,	0,180,433,2689,2878,3405,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	67465906	67469236	chr11:67465906-67469236	0	-	67465906	67465906	8553170	4	1482,90,76,218,	0,1594,2110,3112,
#Partially deleted in new
chr11	67466807	67469168	chr11:67466807-67469168	0	-	67466807	67466807	8553170	4	581,63,65,150,	0,693,1220,2211,
#Partially deleted in new
chr11	67467047	67469233	chr11:67467047-67469233	0	-	67467368	67469192	789624	5	117,77,90,76,215,	0,264,453,969,1971,
#Partially deleted in new
chr11	67467297	67469272	chr11:67467297-67469272	0	-	67467297	67467297	8553170	4	91,63,65,254,	0,203,730,1721,
#Partially deleted in new
chr11	67467298	67469236	chr11:67467298-67469236	0	-	67467298	67467298	8553170	3	292,65,218,	0,729,1720,
#Partially deleted in new
chr11	67467338	67469233	chr11:67467338-67469233	0	-	67467338	67467338	8553170	3	252,76,215,	0,678,1680,
#Partially deleted in new
chr11	67467483	67469243	chr11:67467483-67469243	0	-	67467483	67467483	8553170	3	107,65,225,	0,544,1535,
#Partially deleted in new
chr11	67467763	67469272	chr11:67467763-67469272	0	-	67467763	67467763	8553170	2	329,254,	0,1255,
#Partially deleted in new
chr11	67483040	67491103	chr11:67483040-67491103	3	+	67483158	67490993	789624	6	217,180,189,177,142,316,	0,3965,6226,6997,7275,7747,
#Partially deleted in new
chr11	67483040	67490886	chr11:67483040-67490886	0	+	67483158	67490886	789624	5	217,180,177,142,99,	0,3965,6997,7275,7747,
#Partially deleted in new
chr11	67483048	67489678	chr11:67483048-67489678	0	+	67483048	67483048	8553170	3	209,180,412,	0,3957,6218,
#Deleted in new
chr11	67489335	67490653	chr11:67489335-67490653	0	+	67489335	67490585	789624	3	120,177,338,	0,702,980,
#Deleted in new
chr11	67490244	67490315	chr11:67490244-67490315	3	+	67490244	67490244	5263520	1	71,	0,
#Partially deleted in new
chr11	67491767	67505365	chr11:67491767-67505365	1	-	67492032	67504180	789624	24	529,129,184,150,149,117,111,149,165,168,206,158,108,190,251,62,108,96,327,225,122,215,119,178,	0,1166,1642,1920,2154,2476,3078,3309,3670,4410,5463,5754,6149,6365,6828,7172,7955,8146,8327,10094,10524,10736,12335,13420,
#Partially deleted in new
chr11	67491767	67504369	chr11:67491767-67504369	1	-	67492032	67504180	789624	23	529,129,184,150,149,117,111,149,165,171,206,158,108,190,251,62,108,96,327,225,122,215,267,	0,1166,1642,1920,2154,2476,3078,3309,3670,4410,5463,5754,6149,6365,6828,7172,7955,8146,8327,10094,10524,10736,12335,
#Partially deleted in new
chr11	67491768	67505372	chr11:67491768-67505372	3	-	67492032	67504180	789624	24	528,129,184,150,149,117,111,149,165,171,206,158,108,190,251,62,108,96,327,225,122,215,119,185,	0,1165,1641,1919,2153,2475,3077,3308,3669,4409,5462,5753,6148,6364,6827,7171,7954,8145,8326,10093,10523,10735,12334,13419,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	67491768	67498637	chr11:67491768-67498637	0	-	67491768	67491768	8553170	13	528,129,184,150,149,117,111,149,165,1259,158,108,505,	0,1165,1641,1919,2153,2475,3077,3308,3669,4409,5753,6148,6364,
#Deleted in new
chr11	67493443	67494945	chr11:67493443-67494945	0	-	67493443	67493443	8553170	4	150,383,117,100,	0,244,800,1402,
#Deleted in new
chr11	67494295	67495279	chr11:67494295-67495279	0	-	67494295	67494295	8553170	3	65,111,203,	0,550,781,
#Deleted in new
chr11	67495139	67496439	chr11:67495139-67496439	0	-	67495139	67495139	8553170	3	86,165,262,	0,298,1038,
#Deleted in new
chr11	67499638	67500013	chr11:67499638-67500013	0	-	67499638	67499638	8553170	2	192,100,	0,275,
#Deleted in new
chr11	67499770	67500408	chr11:67499770-67500408	0	-	67499770	67499770	8553170	2	239,314,	0,324,
#Deleted in new
chr11	67501967	67502628	chr11:67501967-67502628	0	-	67501967	67501967	8553170	2	446,125,	0,536,
#Deleted in new
chr11	67502012	67504252	chr11:67502012-67504252	0	-	67502012	67504180	789624	4	74,122,215,150,	0,279,491,2090,
#Deleted in new
chr11	67502038	67504557	chr11:67502038-67504557	0	-	67502038	67504180	789624	5	48,122,215,119,36,	0,253,465,2064,2483,
#Deleted in new
chr11	67502046	67506263	chr11:67502046-67506263	0	-	67502046	67504180	789624	5	40,122,215,119,88,	0,245,457,2056,4129,
#Deleted in new
chr11	67502296	67505314	chr11:67502296-67505314	0	-	67502296	67502296	8553170	3	117,215,127,	0,207,2891,
#Deleted in new
chr11	67502532	67505038	chr11:67502532-67505038	0	-	67502532	67504180	789624	3	186,119,245,	0,1570,2261,
#Deleted in new
chr11	67503839	67505339	chr11:67503839-67505339	0	-	67503839	67503839	8553170	3	37,119,152,	0,263,1348,
#Deleted in new
chr11	67506496	67508631	chr11:67506496-67508631	3	-	67506944	67508082	0	4	516,133,98,631,	0,868,1095,1504,
#Deleted in new
chr11	67506511	67508649	chr11:67506511-67508649	0	-	67506511	67506511	789624	3	501,133,1058,	0,853,1080,
#Deleted in new
chr11	67506619	67508158	chr11:67506619-67508158	0	-	67507896	67508082	789624	4	393,133,98,299,	0,745,972,1240,
#Deleted in new
chr11	67507052	67508091	chr11:67507052-67508091	1	-	67507356	67508082	789624	3	445,98,91,	0,539,948,
#Deleted in new
chr11	67507210	67508076	chr11:67507210-67508076	0	-	67507210	67507210	8553170	2	287,485,	0,381,
#Partially deleted in new
chr11	67518911	67523396	chr11:67518911-67523396	1	-	67519138	67523326	789624	6	253,148,110,135,31,112,	0,881,1139,2113,3040,4373,
#Partially deleted in new
chr11	67518915	67523614	chr11:67518915-67523614	0	-	67521980	67523326	789624	7	249,148,110,135,31,175,330,	0,877,1135,2109,3036,3626,4369,
#Partially deleted in new
chr11	67518946	67523396	chr11:67518946-67523396	3	-	67519138	67523326	789624	7	218,148,110,135,31,171,112,	0,846,1104,2078,3005,3599,4338,
#Partially deleted in new
chr11	67518953	67524517	chr11:67518953-67524517	1	-	67519138	67524376	789624	6	211,148,110,135,31,306,	0,839,1097,2071,2998,5258,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	67538898	67540584	chr11:67538898-67540584	7	+	67538898	67538898	16724991	4	87,106,54,129,	0,200,476,1557,
#Deleted in new
chr11	67583594	67586656	chr11:67583594-67586656	3	+	67583843	67586577	0	7	250,36,107,88,104,108,268,	0,539,869,1090,1543,2509,2794,
#Deleted in new
chr11	67583741	67586650	chr11:67583741-67586650	1	+	67583843	67586577	789624	6	103,36,107,88,104,262,	0,392,722,943,1396,2647,
#Deleted in new
chr11	67583811	67586653	chr11:67583811-67586653	1	+	67583843	67586577	0	7	33,36,107,88,104,108,265,	0,322,652,873,1326,2292,2577,
#Deleted in new
chr11	67583821	67586653	chr11:67583821-67586653	0	+	67583821	67583821	8553170	3	23,1108,550,	0,312,2282,
#Deleted in new
chr11	67583826	67586505	chr11:67583826-67586505	0	+	67583843	67585189	789624	6	18,36,88,104,108,117,	0,307,858,1311,2277,2562,
#Deleted in new
chr11	67584133	67585064	chr11:67584133-67585064	0	+	67584133	67584133	8553170	3	36,107,380,	0,330,551,
#Deleted in new
chr11	67584463	67586604	chr11:67584463-67586604	0	+	67584463	67585081	789624	5	107,88,204,108,216,	0,221,574,1640,1925,
#Deleted in new
chr11	67584794	67586569	chr11:67584794-67586569	0	+	67584794	67584794	8553170	3	447,108,181,	0,1309,1594,
#Deleted in new
chr11	67586103	67586439	chr11:67586103-67586439	0	+	67586103	67586428	789624	2	170,51,	0,285,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	67602879	67606706	chr11:67602879-67606706	3	-	67602879	67602879	789624	3	2224,119,88,	0,3013,3739,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	67604052	67605964	chr11:67604052-67605964	0	-	67604052	67604052	8553170	2	1054,72,	0,1840,
#Partially deleted in new
chr11	67605520	67606642	chr11:67605520-67606642	3	+	67605520	67605520	8553170	2	272,283,	0,839,
#Partially deleted in new
chr11	67605652	67612554	chr11:67605652-67612554	3	+	67607004	67612458	789624	11	392,717,83,171,184,190,213,167,82,146,183,	0,707,2743,2899,3799,4728,5342,5750,6244,6467,6719,
#Partially deleted in new
chr11	67606851	67612506	chr11:67606851-67612506	1	+	67607004	67612458	0	10	225,83,171,184,190,213,167,82,146,135,	0,1544,1700,2600,3529,4143,4551,5045,5268,5520,
#Partially deleted in new
chr11	67606899	67612534	chr11:67606899-67612534	1	+	67608699	67612458	789624	9	177,171,184,190,213,167,82,146,163,	0,1652,2552,3481,4095,4503,4997,5220,5472,
#Partially deleted in new
chr11	67606926	67610582	chr11:67606926-67610582	0	+	67608699	67610582	789624	5	150,79,171,184,202,	0,1473,1625,2525,3454,
#Partially deleted in new
chr11	67606932	67608674	chr11:67606932-67608674	0	+	67607471	67608674	789624	4	144,131,79,123,	0,433,1467,1619,
#Partially deleted in new
chr11	67606939	67612528	chr11:67606939-67612528	1	+	67607004	67612458	0	10	110,83,171,184,190,213,167,82,146,157,	0,1456,1612,2512,3441,4055,4463,4957,5180,5432,
#Partially deleted in new
chr11	67606943	67612535	chr11:67606943-67612535	1	+	67607004	67612458	789624	10	112,83,171,184,190,213,167,82,146,164,	0,1452,1608,2508,3437,4051,4459,4953,5176,5428,
#Partially deleted in new
chr11	67606943	67610268	chr11:67606943-67610268	0	+	67606943	67606943	8553170	4	133,79,171,817,	0,1456,1608,2508,
#Partially deleted in new
chr11	67606943	67608668	chr11:67606943-67608668	0	+	67606943	67606943	8553170	4	133,251,83,117,	0,422,1452,1608,
#Partially deleted in new
chr11	67606943	67610460	chr11:67606943-67610460	0	+	67608699	67610460	789624	5	106,79,171,184,80,	0,1456,1608,2508,3437,
#Partially deleted in new
chr11	67606953	67608606	chr11:67606953-67608606	0	+	67606953	67606953	8553170	4	123,318,83,55,	0,345,1442,1598,
#Partially deleted in new
chr11	67606957	67609627	chr11:67606957-67609627	0	+	67606957	67606957	8553170	4	119,83,171,202,	0,1438,1594,2468,
#Partially deleted in new
chr11	67606957	67610441	chr11:67606957-67610441	0	+	67607004	67610441	789624	5	119,47,171,184,61,	0,1474,1594,2494,3423,
#Partially deleted in new
chr11	67606957	67609596	chr11:67606957-67609596	0	+	67606957	67606957	8553170	4	367,83,171,145,	0,1438,1594,2494,
#Partially deleted in new
chr11	67606957	67609596	chr11:67606957-67609596	0	+	67607004	67608429	789624	5	119,26,83,171,145,	0,341,1438,1594,2494,
#Partially deleted in new
chr11	67606957	67608434	chr11:67606957-67608434	0	+	67606957	67606957	8553170	2	539,35,	0,1442,
#Partially deleted in new
chr11	67606957	67610426	chr11:67606957-67610426	0	+	67607004	67610426	789624	5	119,62,171,184,46,	0,1438,1594,2494,3423,
#Partially deleted in new
chr11	67606957	67609635	chr11:67606957-67609635	0	+	67606957	67606957	8553170	3	119,323,184,	0,1442,2494,
#Partially deleted in new
chr11	67606960	67608518	chr11:67606960-67608518	0	+	67606960	67606960	8553170	3	116,318,123,	0,338,1435,
#Partially deleted in new
chr11	67606960	67610420	chr11:67606960-67610420	0	+	67608432	67610420	789624	5	116,79,163,184,40,	0,1439,1599,2491,3420,
#Partially deleted in new
chr11	67608225	67609586	chr11:67608225-67609586	0	+	67608699	67609586	789624	3	253,171,135,	0,326,1226,
#Partially deleted in new
chr11	67608225	67609852	chr11:67608225-67609852	0	+	67608225	67608225	8553170	2	497,401,	0,1226,
#Partially deleted in new
chr11	67608537	67612528	chr11:67608537-67612528	0	+	67608537	67608537	8553170	7	185,184,827,167,82,146,157,	0,914,1843,2865,3359,3582,3834,
#Partially deleted in new
chr11	67608654	67611967	chr11:67608654-67611967	0	+	67608654	67608654	8553170	6	68,184,190,213,48,71,	0,797,1726,2340,2867,3242,
#Partially deleted in new
chr11	67610392	67612433	chr11:67610392-67612433	0	+	67610392	67611487	789624	6	178,213,93,82,146,62,	0,602,1084,1504,1727,1979,
#Partially deleted in new
chr11	67611005	67612535	chr11:67611005-67612535	0	+	67611005	67612134	789624	4	202,167,146,164,	0,397,1114,1366,
#Partially deleted in new
chr11	67611147	67612209	chr11:67611147-67612209	0	+	67611147	67611147	8553170	3	422,82,90,	0,749,972,
#Partially deleted in new
chr11	67611552	67612535	chr11:67611552-67612535	0	+	67611552	67611552	8553170	3	426,146,164,	0,567,819,
#Partially deleted in new
chr11	67611718	67612397	chr11:67611718-67612397	0	+	67611718	67611718	8553170	2	547,26,	0,653,
#Partially deleted in new
chr11	67612650	67615198	chr11:67612650-67615198	5	-	67612650	67612650	16724991	1	2548,	0,
#Partially deleted in new
chr11	67612652	67613581	chr11:67612652-67613581	4	-	67612652	67612652	16724991	2	315,539,	0,390,
#Partially deleted in new
chr11	67612836	67616257	chr11:67612836-67616257	7	-	67612836	67612836	16724991	10	131,97,82,158,51,135,110,72,80,247,	0,206,438,617,2052,2234,2451,2778,2926,3174,
#Partially deleted in new
chr11	67613051	67616162	chr11:67613051-67616162	4	-	67613051	67613051	16724991	8	88,87,51,135,110,72,80,152,	0,473,1837,2019,2236,2563,2711,2959,
#Partially deleted in new
chr11	67614857	67615801	chr11:67614857-67615801	4	-	67614857	67614857	16724991	2	540,39,	0,905,
#Partially deleted in new
chr11	67627937	67629930	chr11:67627937-67629930	3	-	67628304	67629911	789624	3	463,133,213,	0,981,1780,
#Partially deleted in new
chr11	67627938	67629921	chr11:67627938-67629921	1	-	67627945	67629911	789624	4	313,78,133,204,	0,384,980,1779,
#Partially deleted in new
chr11	67627938	67629921	chr11:67627938-67629921	0	-	67627938	67627938	8553170	2	462,1003,	0,980,
#Partially deleted in new
chr11	67631302	67639560	chr11:67631302-67639560	3	-	67631604	67639472	789624	8	592,95,68,156,172,102,268,95,	0,1015,1300,1645,2886,3513,3693,8163,
#Partially deleted in new
chr11	67642554	67650659	chr11:67642554-67650659	3	-	67642723	67647043	789624	8	385,110,108,94,196,256,74,77,	0,2205,2490,2732,3137,4253,4961,8028,
#Partially deleted in new
chr11	67642700	67647583	chr11:67642700-67647583	1	-	67642723	67645760	789624	7	239,110,108,94,196,118,68,	0,2059,2344,2586,2991,4107,4815,
#Partially deleted in new
chr11	67651575	67653404	chr11:67651575-67653404	7	-	67651575	67651575	16724991	3	36,708,149,	0,678,1680,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	67662161	67681200	chr11:67662161-67681200	3	-	67663214	67666935	789624	10	1238,100,167,387,82,86,121,111,163,25,	0,1500,2234,3123,3960,4154,4412,4744,5311,19014,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	67662162	67674631	chr11:67662162-67674631	1	-	67663214	67666935	789624	10	1237,100,167,387,82,86,121,111,163,195,	0,1499,2233,3122,3959,4153,4411,4743,5310,12274,
#Partially deleted in new
chr11	67663066	67665301	chr11:67663066-67665301	0	-	67663173	67665301	789624	3	333,142,17,	0,1354,2218,
#Partially deleted in new
chr11	67664228	67667635	chr11:67664228-67667635	0	-	67664228	67664228	8553170	7	334,387,82,86,121,111,163,	0,1056,1893,2087,2345,2677,3244,
#Partially deleted in new
chr11	67665547	67674731	chr11:67665547-67674731	0	-	67665547	67666935	789624	7	124,82,86,121,111,163,39,	0,574,768,1026,1358,1925,9145,
#Partially deleted in new
chr11	67666156	67667970	chr11:67666156-67667970	0	-	67666156	67666935	789624	6	47,86,121,111,163,33,	0,159,417,749,1316,1781,
#Partially deleted in new
chr11	67666573	67673791	chr11:67666573-67673791	0	-	67666573	67666573	8553170	5	121,111,163,259,58,	0,332,899,4489,7160,
#Partially deleted in new
chr11	67666646	67671325	chr11:67666646-67671325	0	-	67666646	67666646	8553170	4	48,111,163,263,	0,259,826,4416,
#Partially deleted in new
chr11	67682771	67683058	chr11:67682771-67683058	7	-	67682771	67682771	16724991	1	287,	0,
#Partially deleted in new
chr11	67711701	67716005	chr11:67711701-67716005	7	-	67711701	67711701	16724991	3	306,119,274,	0,2117,4030,
#Deleted in new
chr11	67722482	67723455	chr11:67722482-67723455	7	-	67722482	67722482	16724991	1	973,	0,
#Duplicated in new
chr11	67735599	67784229	chr11:67735599-67784229	3	-	67735599	67735599	8553170	7	962,656,81,88,86,107,61,	0,12876,16138,21012,21276,26469,48569,
#Deleted in new
chr11	67735607	67736559	chr11:67735607-67736559	7	-	67735607	67735607	16724991	1	952,	0,
#Deleted in new
chr11	67744321	67744645	chr11:67744321-67744645	7	+	67744321	67744321	16724991	1	324,	0,
#Partially deleted in new
chr11	67749042	67756968	chr11:67749042-67756968	7	-	67749042	67749042	16724991	3	89,81,204,	0,2695,7722,
#Partially deleted in new
chr11	67785272	67792335	chr11:67785272-67792335	7	+	67785272	67785272	16724991	8	111,122,39,60,111,112,76,129,	0,851,1155,1836,3100,4769,5887,6934,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	67791647	67805322	chr11:67791647-67805322	7	-	67791647	67791647	16724991	3	1646,63,105,	0,11354,13570,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	67791766	67805334	chr11:67791766-67805334	4	-	67791766	67791766	16724991	4	1527,150,63,117,	0,4917,11235,13451,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	67791783	67797669	chr11:67791783-67797669	4	-	67791783	67791783	16724991	2	1510,986,	0,4900,
#Partially deleted in new
chr11	67793195	67805313	chr11:67793195-67805313	5	-	67793195	67793195	16724991	8	98,150,266,134,102,81,77,96,	0,3488,4464,4812,6178,7841,9792,12022,
#Partially deleted in new
chr11	67796682	67805336	chr11:67796682-67805336	5	-	67796682	67796682	16724991	4	151,102,63,119,	0,2691,6319,8535,
#Partially deleted in new
chr11	67812556	67873367	chr11:67812556-67873367	7	-	67812556	67812556	16724991	4	190,598,148,166,	0,7344,17178,60645,
#Deleted in new
chr11	67840941	67841049	chr11:67840941-67841049	7	+	67840941	67840941	16724991	1	108,	0,
#Partially deleted in new
chr11	67925650	67926431	chr11:67925650-67926431	7	-	67925650	67925650	16724991	1	781,	0,
#Partially deleted in new
chr11	67934562	67955802	chr11:67934562-67955802	7	-	67934562	67934562	16724991	4	146,217,92,321,	0,2212,5120,20919,
#Deleted in new
chr11	67935557	67935926	chr11:67935557-67935926	7	+	67935557	67935557	16724991	1	369,	0,
#Partially deleted in new
chr11	67955481	67955690	chr11:67955481-67955690	5	-	67955481	67955481	16724991	1	209,	0,
#Deleted in new
chr11	67965872	67966227	chr11:67965872-67966227	7	-	67965872	67965872	16724991	1	355,	0,
#Deleted in new
chr11	67974285	67975243	chr11:67974285-67975243	7	-	67974285	67974285	16724991	1	958,	0,
#Partially deleted in new
chr11	67991103	68004123	chr11:67991103-68004123	3	-	67991545	68004043	789624	11	754,119,274,183,125,94,133,162,154,142,176,	0,2572,4507,5498,6571,7255,8069,8415,11918,12553,12844,
#Partially deleted in new
chr11	67991103	67999194	chr11:67991103-67999194	0	-	67991103	67991103	8553170	5	259,13,125,94,22,	0,5668,6571,7255,8069,
#Partially deleted in new
chr11	67991817	67995980	chr11:67991817-67995980	0	-	67991817	67991817	8553170	3	40,119,370,	0,1858,3793,
#Partially deleted in new
chr11	67997557	68004041	chr11:67997557-68004041	0	-	67997557	67997557	8553170	7	242,94,133,162,154,142,94,	0,801,1615,1961,5464,6099,6390,
#Partially deleted in new
chr11	67998358	68004056	chr11:67998358-68004056	0	-	67998358	67998358	8553170	5	94,133,162,777,109,	0,814,1160,4663,5589,
#Partially deleted in new
chr11	67998376	68004046	chr11:67998376-68004046	0	-	67999284	68004043	789624	6	76,203,162,154,142,99,	0,796,1142,4645,5280,5571,
#Partially deleted in new
chr11	67998386	68004982	chr11:67998386-68004982	0	-	67998386	68003681	789624	6	66,133,162,154,142,176,	0,786,1132,4635,5270,6420,
#Partially deleted in new
chr11	67999175	68003469	chr11:67999175-68003469	0	-	67999175	67999175	8553170	2	505,448,	0,3846,
#Partially deleted in new
chr11	67999315	68004107	chr11:67999315-68004107	0	-	67999315	67999315	8553170	4	365,154,142,160,	0,3706,4341,4632,
#Partially deleted in new
chr11	67999518	68004069	chr11:67999518-68004069	0	-	67999518	67999518	8553170	3	162,154,413,	0,3503,4138,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	68008577	68028696	chr11:68008577-68028696	3	+	68015297	68027939	789624	10	115,163,111,121,86,82,387,167,100,948,	0,6719,9949,10195,10592,11137,12907,14017,17431,19171,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	68010322	68028676	chr11:68010322-68028676	1	+	68015297	68028140	789624	8	70,163,111,121,86,82,43,624,	0,4974,8204,8450,8847,9392,11162,17730,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	68010326	68029282	chr11:68010326-68029282	0	+	68010326	68010326	8553170	9	66,3341,121,86,82,387,167,100,1534,	0,4970,8446,8843,9388,11158,12268,15682,17422,
#Partially deleted in new
chr11	68010342	68028157	chr11:68010342-68028157	0	+	68015297	68021514	789624	9	50,163,111,121,86,387,167,100,409,	0,4954,8184,8430,8827,11142,12252,15666,17406,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	68010351	68029276	chr11:68010351-68029276	1	+	68015297	68027939	789624	10	41,163,111,121,86,82,387,167,100,1528,	0,4945,8175,8421,8818,9363,11133,12243,15657,17397,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	68010366	68028694	chr11:68010366-68028694	1	+	68015297	68027939	789624	9	26,163,121,86,82,387,167,100,946,	0,4930,8406,8803,9348,11118,12228,15642,17382,
#Partially deleted in new
chr11	68014967	68021522	chr11:68014967-68021522	0	+	68015043	68021522	789624	7	108,163,111,121,86,82,38,	0,329,3559,3805,4202,4747,6517,
#Partially deleted in new
chr11	68015293	68028110	chr11:68015293-68028110	1	+	68015297	68027939	789624	8	166,111,121,86,118,167,100,362,	0,3233,3479,3876,6460,7301,10715,12455,
#Partially deleted in new
chr11	68018580	68021852	chr11:68018580-68021852	0	+	68018580	68019088	789624	5	57,121,190,82,368,	0,192,485,1134,2904,
#Partially deleted in new
chr11	68021843	68024615	chr11:68021843-68024615	0	+	68021843	68024228	789624	3	28,167,408,	0,751,2364,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	68024808	68030461	chr11:68024808-68030461	3	-	68024808	68024808	8553170	4	253,146,137,203,	0,378,4475,5450,
#Partially deleted in new
chr11	68030616	68033730	chr11:68030616-68033730	0	+	68030616	68030616	8553170	5	117,58,51,90,620,	0,1535,1669,2306,2494,
#Partially deleted in new
chr11	68030626	68036644	chr11:68030626-68036644	3	+	68032151	68036593	0	7	107,58,51,90,173,129,183,	0,1525,1659,2296,2484,5626,5835,
#Partially deleted in new
chr11	68030652	68032685	chr11:68030652-68032685	0	+	68030652	68030652	8553170	2	81,534,	0,1499,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	68030664	68033284	chr11:68030664-68033284	0	+	68032151	68033284	789624	6	69,178,58,51,90,174,	0,868,1487,1621,2258,2446,
#Partially deleted in new
chr11	68030683	68036537	chr11:68030683-68036537	0	+	68032151	68032359	789624	7	50,58,238,90,173,129,76,	0,1468,1602,2239,2427,5569,5778,
#Partially deleted in new
chr11	68030687	68036639	chr11:68030687-68036639	1	+	68036318	68036593	789624	3	46,129,178,	0,5565,5774,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	68030712	68035278	chr11:68030712-68035278	0	+	68030712	68030712	8553170	3	21,58,2993,	0,1439,1573,
#Partially deleted in new
chr11	68030742	68036514	chr11:68030742-68036514	0	+	68032151	68036514	789624	7	135,58,51,90,173,129,53,	0,1409,1543,2180,2368,5510,5719,
#Partially deleted in new
chr11	68030742	68033223	chr11:68030742-68033223	0	+	68030906	68032971	789624	5	219,58,51,90,113,	0,1409,1543,2180,2368,
#Partially deleted in new
chr11	68030759	68036348	chr11:68030759-68036348	0	+	68030906	68036348	789624	4	202,90,173,96,	0,2163,2351,5493,
#Partially deleted in new
chr11	68030965	68033241	chr11:68030965-68033241	0	+	68032151	68033241	789624	5	185,58,51,90,131,	0,1186,1320,1957,2145,
#Partially deleted in new
chr11	68032160	68035683	chr11:68032160-68035683	0	+	68032160	68032359	789624	5	49,238,90,173,56,	0,125,762,950,3467,
#Deleted in new
chr11	68032863	68032922	chr11:68032863-68032922	3	+	68032863	68032863	5263520	1	59,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	68033140	68036644	chr11:68033140-68036644	0	+	68033140	68035765	789624	4	143,161,129,183,	0,2487,3112,3321,
#Partially deleted in new
chr11	68033851	68036301	chr11:68033851-68036301	0	+	68033851	68033851	8553170	2	323,49,	0,2401,
#Deleted in new
chr11	68033896	68033981	chr11:68033896-68033981	3	+	68033896	68033896	5263520	1	85,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	68036028	68036644	chr11:68036028-68036644	0	+	68036028	68036028	8553170	2	353,183,	0,433,
#Partially deleted in new
chr11	68039015	68050895	chr11:68039015-68050895	3	+	68041271	68050819	789624	20	104,121,79,221,86,127,83,94,213,145,140,158,91,119,214,126,105,118,178,155,	0,2252,2737,3627,3930,4355,4555,4798,5116,5942,8417,8631,8866,9863,10065,10647,10946,11121,11471,11725,
#Partially deleted in new
chr11	68039028	68044204	chr11:68039028-68044204	0	+	68041271	68043592	789624	8	91,121,79,221,86,83,94,73,	0,2239,2724,3614,3917,4542,4785,5103,
#Partially deleted in new
chr11	68039081	68044264	chr11:68039081-68044264	0	+	68041271	68044264	789624	9	38,79,79,221,86,127,83,94,133,	0,2186,2671,3561,3864,4289,4489,4732,5050,
#Partially deleted in new
chr11	68039105	68043593	chr11:68039105-68043593	0	+	68041271	68043593	789624	8	14,171,121,79,221,86,127,23,	0,686,2162,2647,3537,3840,4265,4465,
#Partially deleted in new
chr11	68039114	68043590	chr11:68039114-68043590	0	+	68039114	68039114	8553170	6	5,79,79,221,552,20,	0,2153,2638,3528,3831,4456,
#Partially deleted in new
chr11	68042979	68050895	chr11:68042979-68050895	1	+	68043588	68050819	789624	15	518,83,94,213,145,140,158,91,119,214,126,105,118,178,155,	0,591,834,1152,1978,4453,4667,4902,5899,6101,6683,6982,7157,7507,7761,
#Deleted in new
chr11	68043322	68044235	chr11:68043322-68044235	0	+	68043322	68043322	8553170	3	331,94,104,	0,491,809,
#Partially deleted in new
chr11	68043367	68047798	chr11:68043367-68047798	0	+	68043367	68047798	789624	7	130,83,94,213,56,140,152,	0,203,446,764,1679,4065,4279,
#Partially deleted in new
chr11	68043788	68050878	chr11:68043788-68050878	0	+	68043788	68043788	8553170	13	119,213,145,140,158,91,119,214,126,105,118,178,138,	0,343,1169,3644,3858,4093,5090,5292,5874,6173,6348,6698,6952,
#Partially deleted in new
chr11	68044288	68050868	chr11:68044288-68050868	0	+	68044288	68044288	8553170	11	56,145,140,326,119,214,126,105,118,178,128,	0,669,3144,3358,4590,4792,5374,5673,5848,6198,6452,
#Deleted in new
chr11	68044793	68044957	chr11:68044793-68044957	3	+	68044793	68044793	5263520	1	164,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	68047473	68048332	chr11:68047473-68048332	0	+	68047473	68047473	8553170	3	99,158,451,	0,173,408,
#Deleted in new
chr11	68049147	68050220	chr11:68049147-68050220	0	+	68049147	68049147	8553170	3	641,105,84,	0,814,989,
#Deleted in new
chr11	68050045	68050821	chr11:68050045-68050821	0	+	68050045	68050787	789624	3	21,118,81,	0,91,695,
#Deleted in new
chr11	68050052	68050647	chr11:68050052-68050647	0	+	68050052	68050052	8553170	2	14,511,	0,84,
#Deleted in new
chr11	68050282	68050821	chr11:68050282-68050821	0	+	68050282	68050282	8553170	2	142,81,	0,458,
#Deleted in new
chr11	68050739	68053385	chr11:68050739-68053385	0	+	68050739	68050739	8553170	3	193,106,27,	0,2240,2619,
#Deleted in new
chr11	68052092	68053694	chr11:68052092-68053694	3	+	68052092	68052092	8553170	3	349,106,336,	0,887,1266,
#Deleted in new
chr11	68052822	68053762	chr11:68052822-68053762	1	+	68052822	68052822	8553170	2	263,401,	0,539,
#Partially deleted in new
chr11	68052858	68121204	chr11:68052858-68121204	3	-	68053987	68121177	0	12	1189,82,107,109,88,59,105,134,114,54,112,377,	0,9094,11666,12927,13570,16020,17330,17865,21858,28545,44160,67969,
#Partially deleted in new
chr11	68053511	68061725	chr11:68053511-68061725	0	-	68053511	68053511	8553170	2	536,126,	0,8088,
#Partially deleted in new
chr11	68053514	68066460	chr11:68053514-68066460	0	-	68061665	68066460	789624	6	533,338,82,107,109,32,	0,7978,8438,11010,12271,12914,
#Partially deleted in new
chr11	68053819	68121444	chr11:68053819-68121444	1	-	68053987	68121177	0	11	228,82,107,109,88,59,105,134,114,112,617,	0,8133,10705,11966,12609,15059,16369,16904,20897,43199,67008,
#Partially deleted in new
chr11	68066471	68081810	chr11:68066471-68081810	0	-	68066471	68066471	8553170	6	45,59,105,134,114,407,	0,2407,3717,4252,8245,14932,
#Partially deleted in new
chr11	68066502	68089880	chr11:68066502-68089880	0	-	68066502	68066502	8553170	8	14,59,105,134,114,54,30,60,	0,2376,3686,4221,8214,14901,15988,23318,
#Partially deleted in new
chr11	68070222	68120828	chr11:68070222-68120828	0	-	68070222	68097114	789624	6	71,134,114,54,112,39,	0,501,4494,11181,26796,50567,
#Partially deleted in new
chr11	68070815	68082098	chr11:68070815-68082098	0	-	68070815	68070815	8553170	4	42,114,54,372,	0,3901,10588,10911,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	68122052	68130518	chr11:68122052-68130518	3	+	68122052	68122052	8553170	2	151,340,	0,8126,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	68129797	68130444	chr11:68129797-68130444	1	+	68129797	68129797	8553170	2	285,266,	0,381,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	68154862	68213415	chr11:68154862-68213415	3	-	68157687	68190076	789624	11	4309,197,137,20,167,110,166,69,148,236,278,	0,12119,16152,16369,16680,18941,20155,25269,30918,35054,58275,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	68156039	68190076	chr11:68156039-68190076	1	-	68157687	68190076	789624	10	3132,197,137,20,167,110,166,69,148,160,	0,10942,14975,15192,15503,17764,18978,24092,29741,33877,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	68157579	68190081	chr11:68157579-68190081	0	-	68171279	68190076	789624	10	1592,197,137,65,167,110,166,69,148,165,	0,9402,13435,13652,13963,16224,17438,22552,28201,32337,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	68158292	68213415	chr11:68158292-68213415	0	-	68175148	68190076	789624	12	879,197,137,20,167,110,166,68,69,148,236,278,	0,8689,12722,12939,13250,15511,16725,21177,21839,27488,31624,54845,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	68165714	68213286	chr11:68165714-68213286	1	-	68166973	68190076	789624	10	1464,137,20,167,110,166,69,148,236,149,	0,5300,5517,5828,8089,9303,14417,20066,24202,47423,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	68165714	68213828	chr11:68165714-68213828	1	-	68166973	68190076	789624	10	1464,137,20,167,110,166,69,148,236,352,	0,5300,5517,5828,8089,9303,14417,20066,24202,47762,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	68165718	68213595	chr11:68165718-68213595	1	-	68165913	68190076	789624	11	230,197,137,20,167,110,166,69,148,236,119,	0,1263,5296,5513,5824,8085,9299,14413,20062,24198,47758,
#Partially deleted in new
chr11	68166406	68213601	chr11:68166406-68213601	1	-	68166973	68190076	789624	9	772,137,20,167,110,166,148,236,125,	0,4608,4825,5136,7397,8611,19374,23510,47070,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	68171118	68180165	chr11:68171118-68180165	0	-	68174099	68180165	789624	7	33,20,167,110,123,166,34,	0,113,424,2685,2969,3899,9013,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	68171653	68176714	chr11:68171653-68176714	0	-	68171653	68171653	8553170	4	56,110,166,189,	0,2150,3364,4872,
#Partially deleted in new
chr11	68171676	68179822	chr11:68171676-68179822	0	-	68171676	68171676	8553170	4	33,110,166,353,	0,2127,3341,7793,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	68173882	68213317	chr11:68173882-68213317	0	-	68173882	68185875	789624	5	31,166,69,148,180,	0,1135,6249,11898,39255,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	68175046	68213678	chr11:68175046-68213678	0	-	68175046	68185875	789624	4	137,69,148,202,	0,5085,10734,38430,
#Partially deleted in new
chr11	68180154	68212754	chr11:68180154-68212754	0	-	68180154	68190076	789624	4	46,148,236,155,	0,5626,9762,32445,
#Partially deleted in new
chr11	68189605	68213567	chr11:68189605-68213567	0	-	68189605	68189605	8553170	2	547,91,	0,23871,
#Partially deleted in new
chr11	68261334	68271962	chr11:68261334-68271962	3	-	68261644	68263767	789624	4	1584,175,198,106,	0,2357,6719,10522,
#Deleted in new
chr11	68261462	68263355	chr11:68261462-68263355	0	-	68261462	68261462	8553170	2	340,111,	0,1782,
#Partially deleted in new
chr11	68261608	68271947	chr11:68261608-68271947	1	-	68261644	68263767	789624	5	117,188,175,198,302,	0,1122,2083,6445,10037,
#Partially deleted in new
chr11	68262462	68272001	chr11:68262462-68272001	0	-	68262462	68262462	8553170	4	456,142,198,145,	0,1110,5591,9394,
#Partially deleted in new
chr11	68263691	68271989	chr11:68263691-68271989	0	-	68263691	68263767	789624	3	175,225,133,	0,4362,8165,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	68267100	68271971	chr11:68267100-68271971	0	-	68267100	68267100	8553170	3	297,198,115,	0,953,4756,
#Partially deleted in new
chr11	68267179	68271916	chr11:68267179-68271916	0	-	68267179	68267179	8553170	3	218,198,271,	0,874,4466,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	68267460	68271918	chr11:68267460-68271918	0	-	68267460	68267460	8553170	3	225,198,62,	0,593,4396,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	68267739	68271947	chr11:68267739-68271947	0	-	68267739	68267739	8553170	2	512,91,	0,4117,
#Partially deleted in new
chr11	68312608	68449275	chr11:68312608-68449275	3	+	68312714	68449070	789624	23	197,397,198,197,132,397,172,217,290,227,185,324,200,209,191,210,126,237,111,237,140,98,467,	0,35238,45041,51138,52962,73707,77272,90874,93915,97305,98827,101080,103719,110880,112493,113369,116966,120993,124280,125837,127168,133827,136200,
#Partially deleted in new
chr11	68312683	68449272	chr11:68312683-68449272	0	+	68312714	68403486	789624	23	122,397,198,197,132,397,217,194,290,227,185,324,200,209,191,210,126,237,111,237,140,98,464,	0,35163,44966,51063,52887,73632,90799,91539,93840,97230,98752,101005,103644,110805,112418,113294,116891,120918,124205,125762,127093,133752,136125,
#Partially deleted in new
chr11	68403976	68406547	chr11:68403976-68406547	0	+	68403976	68403976	8553170	2	440,24,	0,2547,
#Partially deleted in new
chr11	68410028	68413195	chr11:68410028-68413195	0	+	68410028	68410028	8553170	3	112,185,237,	0,1407,2930,
#Partially deleted in new
chr11	68438592	68439953	chr11:68438592-68439953	0	+	68438592	68438592	8553170	2	90,177,	0,1184,
#Partially deleted in new
chr11	68439872	68449138	chr11:68439872-68449138	0	+	68439872	68449070	789624	4	44,114,98,330,	0,5700,6563,8936,
#Partially deleted in new
chr11	68446980	68449182	chr11:68446980-68449182	0	+	68446980	68446980	8553170	2	177,374,	0,1828,
#Partially deleted in new
chr11	68460730	68615334	chr11:68460730-68615334	1	+	68537664	68613117	789624	24	97,151,233,187,138,66,113,114,130,153,150,65,116,86,87,98,55,131,122,154,107,151,120,2269,	0,58770,76928,84107,87336,90390,93414,97835,103572,106283,109017,110309,113378,115227,122312,127196,129929,130845,135366,139610,141132,142611,149173,152335,
#Partially deleted in new
chr11	68460737	68537689	chr11:68460737-68537689	0	+	68537664	68537689	789624	5	90,127,139,151,31,	0,44407,54290,58763,76921,
#Partially deleted in new
chr11	68460746	68554220	chr11:68460746-68554220	0	+	68544883	68554220	789624	7	81,127,151,187,138,66,76,	0,44398,58754,84091,87320,90374,93398,
#Partially deleted in new
chr11	68460747	68537891	chr11:68460747-68537891	0	+	68537664	68537891	789624	4	80,139,151,233,	0,54280,58753,76911,
#Partially deleted in new
chr11	68460747	68613882	chr11:68460747-68613882	1	+	68544883	68613117	789624	19	80,151,187,138,153,150,65,116,86,87,98,55,131,122,154,107,151,120,817,	0,58753,84090,87319,106266,109000,110292,113361,115210,122295,127179,129912,130828,135349,139593,141115,142594,149156,152318,
#Partially deleted in new
chr11	68460748	68613117	chr11:68460748-68613117	1	+	68537664	68613117	789624	23	79,151,233,187,138,66,113,114,130,153,150,65,116,86,98,55,131,122,154,107,151,120,52,	0,58752,76910,84089,87318,90372,93396,97817,103554,106265,108999,110291,113360,115209,127178,129911,130827,135348,139592,141114,142593,149155,152317,
#Partially deleted in new
chr11	68460751	68615334	chr11:68460751-68615334	1	+	68537664	68613117	789624	22	76,233,187,138,66,113,114,130,153,150,65,116,86,47,55,131,122,154,107,151,120,2269,	0,76907,84086,87315,90369,93393,97814,103551,106262,108996,110288,113357,115206,127226,129908,130824,135345,139589,141111,142590,149152,152314,
#Partially deleted in new
chr11	68460754	68614575	chr11:68460754-68614575	1	+	68537664	68613117	789624	24	73,151,233,187,138,66,113,114,130,153,150,65,116,86,87,80,55,131,122,154,107,151,120,1510,	0,58746,76904,84083,87312,90366,93390,97811,103548,106259,108993,110285,113354,115203,122288,127190,129905,130821,135342,139586,141108,142587,149149,152311,
#Partially deleted in new
chr11	68460769	68615331	chr11:68460769-68615331	3	+	68537664	68613117	789624	25	58,151,233,187,138,66,113,114,130,153,150,65,116,86,87,98,55,131,122,154,107,151,18,120,2266,	0,58731,76889,84068,87297,90351,93375,97796,103533,106244,108978,110270,113339,115188,122273,127157,129890,130806,135327,139571,141093,142572,148841,149134,152296,
#Partially deleted in new
chr11	68460812	68615252	chr11:68460812-68615252	1	+	68537664	68613117	789624	23	15,105,151,233,187,138,66,113,114,130,150,65,116,86,98,55,131,122,154,107,151,120,2187,	0,44332,58688,76846,84025,87254,90308,93332,97753,103490,108935,110227,113296,115145,127114,129847,130763,135284,139528,141050,142529,149091,152253,
#Partially deleted in new
chr11	68460812	68615252	chr11:68460812-68615252	1	+	68537664	68614677	789624	23	15,105,151,233,187,138,66,113,114,130,150,65,116,86,98,55,131,122,154,107,151,120,621,	0,44332,58688,76846,84025,87254,90308,93332,97753,103490,108935,110227,113296,115145,127114,129847,130763,135284,139528,141050,142529,149091,153819,
#Partially deleted in new
chr11	68488608	68488840	chr11:68488608-68488840	7	-	68488608	68488608	16724991	1	232,	0,
#Partially deleted in new
chr11	68519505	68615310	chr11:68519505-68615310	1	+	68537664	68613117	789624	22	146,233,187,138,66,113,114,130,153,150,65,116,86,80,55,131,122,154,107,151,120,2245,	0,18153,25332,28561,31615,34639,39060,44797,47508,50242,51534,54603,56452,68439,71154,72070,76591,80835,82357,83836,90398,93560,
#Partially deleted in new
chr11	68519562	68551219	chr11:68519562-68551219	0	+	68519562	68519562	8553170	4	89,187,138,99,	0,25275,28504,31558,
#Partially deleted in new
chr11	68519634	68551220	chr11:68519634-68551220	0	+	68519634	68519634	8553170	4	17,187,138,231,	0,25203,28432,31355,
#Partially deleted in new
chr11	68535410	68551127	chr11:68535410-68551127	0	+	68537664	68551127	789624	5	122,233,187,138,7,	0,2248,9427,12656,15710,
#Partially deleted in new
chr11	68537815	68551219	chr11:68537815-68551219	0	+	68537815	68537815	8553170	4	76,187,138,99,	0,7022,10251,13305,
#Partially deleted in new
chr11	68558195	68564407	chr11:68558195-68564407	0	+	68558195	68558195	8553170	2	484,105,	0,6107,
#Partially deleted in new
chr11	68558641	68613354	chr11:68558641-68613354	0	+	68558641	68613117	789624	16	38,130,168,150,65,116,86,98,55,131,122,154,107,151,120,289,	0,5661,8357,11106,12398,15467,17316,29285,32018,32934,37455,41699,43221,44700,51262,54424,
#Partially deleted in new
chr11	68564423	68571216	chr11:68564423-68571216	0	+	68564423	68564423	8553170	4	9,153,150,177,	0,2590,5324,6616,
#Partially deleted in new
chr11	68571098	68596218	chr11:68571098-68596218	0	+	68571098	68587839	789624	8	6,116,86,87,227,55,131,122,	0,3010,4859,11944,16699,19561,20477,24998,
#Partially deleted in new
chr11	68586275	68614592	chr11:68586275-68614592	0	+	68586275	68586275	8553170	10	1749,55,131,122,154,107,151,18,120,1527,	0,4384,5300,9821,14065,15587,17066,23335,23628,26790,
#Partially deleted in new
chr11	68601885	68613124	chr11:68601885-68613124	0	+	68601885	68609566	789624	5	84,151,156,120,59,	0,1456,7587,8018,11180,
#Deleted in new
chr11	68609774	68613398	chr11:68609774-68613398	0	+	68609774	68609774	8553170	2	249,333,	0,3291,
#Deleted in new
chr11	68609950	68613538	chr11:68609950-68613538	0	+	68609950	68613117	789624	2	73,503,	0,3085,
#Deleted in new
chr11	68612898	68616230	chr11:68612898-68616230	3	-	68612898	68612898	8553170	3	323,138,42,	0,2983,3290,
#Deleted in new
chr11	68615744	68616447	chr11:68615744-68616447	0	-	68615744	68615744	8553170	2	275,259,	0,444,
#Deleted in new
chr11	68615791	68616711	chr11:68615791-68616711	1	-	68615791	68615791	8553170	3	228,98,237,	0,397,683,
#Deleted in new
chr11	68683778	68684638	chr11:68683778-68684638	0	+	68683778	68683778	8553170	2	348,298,	0,562,
#Partially deleted in new
chr11	68684474	68691175	chr11:68684474-68691175	3	+	68684923	68690987	789624	6	258,81,55,87,78,259,	0,449,1119,3539,4374,6442,
#Partially deleted in new
chr11	68707439	68751564	chr11:68707439-68751564	3	-	68708307	68750660	789624	10	1061,176,138,103,89,77,121,159,510,145,	0,3434,5830,8397,31260,34878,37551,39768,42750,43980,
#Partially deleted in new
chr11	68707441	68710606	chr11:68707441-68710606	0	-	68707441	68707441	8553170	3	413,135,96,	0,924,3069,
#Partially deleted in new
chr11	68707558	68715934	chr11:68707558-68715934	0	-	68707787	68715934	789624	5	296,135,176,138,98,	0,807,3315,5711,8278,
#Partially deleted in new
chr11	68732586	68750265	chr11:68732586-68750265	0	-	68732586	68732586	8553170	5	328,72,89,159,76,	0,1067,6113,14621,17603,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	68736131	68751467	chr11:68736131-68751467	1	-	68738783	68750660	789624	5	2657,121,159,510,48,	0,8859,11076,14058,15288,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	68737327	68738798	chr11:68737327-68738798	0	-	68737327	68737327	8553170	2	558,99,	0,1372,
#Partially deleted in new
chr11	68738461	68751460	chr11:68738461-68751460	1	-	68738695	68750660	789624	6	327,77,121,159,510,41,	0,3856,6529,8746,11728,12958,
#Deleted in new
chr11	68744872	68747366	chr11:68744872-68747366	0	-	68744872	68744872	8553170	2	239,159,	0,2335,
#Partially deleted in new
chr11	68747145	68750611	chr11:68747145-68750611	0	-	68747145	68747145	8553170	2	221,422,	0,3044,
#Partially deleted in new
chr11	68754619	68815503	chr11:68754619-68815503	1	-	68754815	68815474	0	18	232,93,114,153,135,165,117,106,189,196,88,108,78,138,102,172,140,170,	0,4949,5605,6915,8007,18645,20696,26020,27151,30195,38695,40184,42236,44598,49380,52847,57817,60714,
#Partially deleted in new
chr11	68754621	68841931	chr11:68754621-68841931	1	-	68754815	68815474	0	19	230,93,114,153,135,165,117,106,189,196,88,108,78,138,102,172,140,154,157,	0,4947,5603,6913,8005,18643,20694,26018,27149,30193,38693,40182,42234,44596,49378,52845,57815,60712,87153,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr11	68754888	68841916	chr11:68754888-68841916	3	-	68757643	68815474	0	19	2842,93,114,153,135,165,117,106,189,196,88,108,78,138,102,172,140,154,142,	0,4680,5336,6646,7738,18376,20427,25751,26882,29926,38426,39915,41967,44329,49111,52578,57548,60445,86886,
#Partially deleted in new
chr11	68757612	68815503	chr11:68757612-68815503	1	-	68757643	68815474	0	18	118,93,114,153,135,165,117,106,189,196,88,108,78,138,102,172,140,170,	0,1956,2612,3922,5014,15652,17703,23027,24158,27202,35702,37191,39243,41605,46387,49854,54824,57721,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	68762626	68773887	chr11:68762626-68773887	0	-	68762626	68762626	8553170	3	135,165,285,	0,10638,10976,
#Partially deleted in new
chr11	68785743	68799268	chr11:68785743-68799268	1	-	68786021	68796882	789624	5	292,88,108,78,51,	0,7571,9060,11112,13474,
#Partially deleted in new
chr11	68807566	68839684	chr11:68807566-68839684	0	-	68807566	68815474	789624	4	72,140,154,133,	0,4870,7767,31985,
#Partially deleted in new
chr11	68812437	68844410	chr11:68812437-68844410	0	-	68812437	68815474	789624	3	139,154,266,	0,2896,31707,
#Partially deleted in new
chr11	68891275	68903820	chr11:68891275-68903820	3	-	68891330	68903810	0	7	120,104,53,164,86,58,98,	0,1614,2127,5239,6651,9272,12447,
#Partially deleted in new
chr11	68891275	68903786	chr11:68891275-68903786	1	-	68891330	68896655	0	7	120,104,53,164,86,71,64,	0,1614,2127,5239,6651,9259,12447,
#Partially deleted in new
chr11	68891278	68903835	chr11:68891278-68903835	0	-	68900543	68903810	789624	6	1715,134,164,86,71,113,	0,2043,5236,6648,9256,12444,
#Partially deleted in new
chr11	68891282	68903827	chr11:68891282-68903827	0	-	68893398	68903810	789624	7	113,104,134,164,86,58,105,	0,1607,2039,5232,6644,9265,12440,
#Partially deleted in new
chr11	68892491	68903778	chr11:68892491-68903778	1	-	68892599	68896655	789624	6	502,53,164,86,71,56,	0,911,4023,5435,8043,11231,
#Partially deleted in new
chr11	68892894	68903814	chr11:68892894-68903814	0	-	68897989	68903810	789624	5	99,53,324,86,92,	0,508,3620,5032,10828,
#Partially deleted in new
chr11	68892968	68903832	chr11:68892968-68903832	0	-	68900543	68903810	789624	6	25,53,210,86,71,110,	0,434,3500,4958,7566,10754,
#Partially deleted in new
chr11	68897593	68903802	chr11:68897593-68903802	0	-	68897593	68897593	8553170	3	419,58,80,	0,2954,6129,
#Partially deleted in new
chr11	68903841	68940599	chr11:68903841-68940599	3	+	68903952	68939731	0	15	197,170,193,98,164,201,148,175,183,119,95,124,855,173,1066,	0,2227,4303,4692,7598,10981,13894,25341,29457,29953,30622,31457,32395,34340,35692,
#Partially deleted in new
chr11	68903890	68911479	chr11:68903890-68911479	0	+	68903952	68908148	789624	4	148,193,98,40,	0,4254,4643,7549,
#Partially deleted in new
chr11	68903896	68914938	chr11:68903896-68914938	1	+	68903952	68911569	789624	5	142,170,193,164,116,	0,2172,4248,7543,10926,
#Partially deleted in new
chr11	68903925	68908192	chr11:68903925-68908192	0	+	68903952	68906258	789624	3	113,316,48,	0,2143,4219,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	68926195	68933381	chr11:68926195-68933381	0	+	68926195	68926195	8553170	4	170,175,112,83,	0,2987,4127,7103,
#Partially deleted in new
chr11	68930090	68933398	chr11:68930090-68933398	0	+	68930090	68930090	8553170	2	344,100,	0,3208,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	68932304	68937067	chr11:68932304-68937067	0	+	68932304	68932304	8553170	5	1177,119,95,124,831,	0,1490,2159,2994,3932,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	68932946	68934072	chr11:68932946-68934072	0	+	68932946	68932946	8553170	2	535,278,	0,848,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	68932946	68940602	chr11:68932946-68940602	0	+	68932946	68932946	8553170	6	535,119,95,855,173,1069,	0,848,1517,3290,5235,6587,
#Deleted in new
chr11	68933681	68936334	chr11:68933681-68936334	0	+	68933681	68933681	8553170	4	232,95,124,98,	0,782,1617,2555,
#Deleted in new
chr11	68934330	68936446	chr11:68934330-68936446	0	+	68934330	68934330	8553170	3	228,124,210,	0,968,1906,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	68937739	68940601	chr11:68937739-68940601	0	+	68937739	68937739	8553170	2	615,1068,	0,1794,
#Deleted in new
chr11	68941502	68942852	chr11:68941502-68942852	3	-	68941502	68941502	8553170	2	485,84,	0,1266,
#Deleted in new
chr11	68980020	68980986	chr11:68980020-68980986	3	-	68980020	68980986	789624	1	966,	0,
#Deleted in new
chr11	69000764	69002048	chr11:69000764-69002048	3	-	69000764	69000764	8553170	1	1284,	0,
#Deleted in new
chr11	69004393	69005100	chr11:69004393-69005100	3	+	69004393	69004393	8553170	2	254,112,	0,595,
#Partially deleted in new
chr11	69004394	69013382	chr11:69004394-69013382	1	-	69005277	69009901	789624	3	1867,115,300,	0,5459,8688,
#Partially deleted in new
chr11	69004397	69013409	chr11:69004397-69013409	3	-	69005277	69009901	789624	3	1864,104,327,	0,5456,8685,
#Deleted in new
chr11	69009416	69013246	chr11:69009416-69013246	1	-	69009586	69009901	789624	2	541,164,	0,3666,
#Deleted in new
chr11	69012282	69014066	chr11:69012282-69014066	1	+	69012282	69012282	8553170	2	266,276,	0,1508,
#Deleted in new
chr11	69012353	69013327	chr11:69012353-69013327	0	+	69012353	69012353	8553170	2	195,337,	0,637,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	69012430	69018447	chr11:69012430-69018447	3	+	69012430	69012430	789624	6	118,114,186,151,109,812,	0,1360,1700,2010,3180,5205,
#Partially deleted in new
chr11	69048896	69088524	chr11:69048896-69088524	3	+	69048997	69087953	789624	25	210,65,77,178,117,107,73,103,66,65,101,82,87,120,60,129,50,100,72,77,82,83,82,95,650,	0,5136,5824,6278,8681,13987,14998,18606,21533,22459,23026,23730,24018,29585,29837,29995,30937,32503,35048,36313,36774,36951,37626,38215,38978,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr11	69048931	69136316	chr11:69048931-69136316	1	+	69048997	69085253	789624	20	175,65,77,178,117,107,73,103,66,65,101,82,87,120,60,129,100,72,77,882,	0,5101,5789,6243,8646,13952,14963,18571,21498,22424,22991,23695,23983,29550,29802,29960,32468,35013,36278,86503,
#Partially deleted in new
chr11	69048933	69079847	chr11:69048933-69079847	0	+	69048933	69048933	8553170	14	173,65,117,107,73,103,66,65,101,82,87,120,60,956,	0,5099,8644,13950,14961,18569,21496,22422,22989,23693,23981,29548,29800,29958,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr11	69048933	69136296	chr11:69048933-69136296	0	+	69048997	69085253	789624	27	173,65,77,178,117,107,73,103,66,65,101,82,87,120,60,129,100,72,77,82,83,82,95,492,130,146,862,	0,5099,5787,6241,8644,13950,14961,18569,21496,22422,22989,23693,23981,29548,29800,29958,32466,35011,36276,36737,36914,37589,38178,38941,78495,80521,86501,
#Partially deleted in new
chr11	69048960	69088203	chr11:69048960-69088203	1	+	69048997	69087953	789624	18	146,65,77,178,117,107,73,103,66,65,101,82,87,120,60,129,95,329,	0,5072,5760,6214,8617,13923,14934,18542,21469,22395,22962,23666,23954,29521,29773,29931,38151,38914,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr11	69048974	69136264	chr11:69048974-69136264	1	+	69048997	69135528	789624	23	132,65,77,178,117,107,73,103,66,65,101,82,87,120,60,129,50,100,72,77,82,83,830,	0,5058,5746,6200,8603,13909,14920,18528,21455,22381,22948,23652,23940,29507,29759,29917,30859,32425,34970,36235,36696,36873,86460,
#Partially deleted in new
chr11	69049029	69054390	chr11:69049029-69054390	0	+	69049029	69049029	8553170	2	77,358,	0,5003,
#Partially deleted in new
chr11	69055161	69090604	chr11:69055161-69090604	0	+	69055161	69055161	8553170	18	191,117,107,73,103,66,65,101,120,60,129,100,72,82,83,82,95,2730,	0,2416,7722,8733,12341,15268,16194,16761,23320,23572,23730,26238,28783,30509,30686,31361,31950,32713,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr11	69072914	69162440	chr11:69072914-69162440	0	+	69072914	69087953	789624	15	87,120,60,129,50,100,72,77,82,83,82,95,492,98,2995,	0,5567,5819,5977,6919,8485,11030,12295,12756,12933,13608,14197,14960,62520,86531,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	69083175	69083258	chr11:69083175-69083258	3	+	69083175	69083175	5263520	1	83,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	69103492	69109094	chr11:69103492-69109094	3	+	69103492	69103492	8553170	2	380,242,	0,5360,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	69147227	69171564	chr11:69147227-69171564	3	-	69147227	69147227	789624	3	513,111,366,	0,21101,23971,
#Deleted in new
chr11	69155477	69159752	chr11:69155477-69159752	3	+	69157846	69158002	789624	3	210,2178,307,	0,1696,3968,
#Deleted in new
chr11	69155909	69159740	chr11:69155909-69159740	0	+	69155909	69155909	8553170	2	205,295,	0,3536,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	69294137	69296885	chr11:69294137-69296885	1	+	69295354	69296392	789624	3	439,263,1294,	0,1095,1454,
#Partially deleted in new
chr11	69294150	69341682	chr11:69294150-69341682	0	+	69294150	69294150	8553170	2	426,173,	0,47359,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	69294154	69297287	chr11:69294154-69297287	3	+	69295354	69296392	789624	3	422,169,1696,	0,1172,1437,
#Deleted in new
chr11	69294154	69295850	chr11:69294154-69295850	0	+	69294154	69294154	8553170	2	422,211,	0,1485,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	69294157	69297287	chr11:69294157-69297287	1	+	69295624	69296392	789624	2	419,1887,	0,1243,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	69294163	69297287	chr11:69294163-69297287	0	+	69294163	69294163	8553170	2	413,2055,	0,1069,
#Deleted in new
chr11	69294173	69295662	chr11:69294173-69295662	0	+	69294173	69294173	8553170	3	403,95,71,	0,1227,1418,
#Deleted in new
chr11	69295585	69296171	chr11:69295585-69296171	0	+	69295585	69295585	8553170	2	54,272,	0,314,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	69299273	69367003	chr11:69299273-69367003	0	+	69299273	69299273	8553170	3	155,169,261,	0,42236,67469,
#Deleted in new
chr11	69303411	69303807	chr11:69303411-69303807	7	-	69303411	69303411	16724991	1	396,	0,
#Partially deleted in new
chr11	69316831	69341677	chr11:69316831-69341677	0	+	69316831	69316831	8553170	2	94,168,	0,24678,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	69337359	69367726	chr11:69337359-69367726	0	+	69337359	69337359	8553170	5	77,169,124,74,432,	0,4150,29383,29679,29935,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	69341555	69367415	chr11:69341555-69367415	0	+	69341555	69341555	8553170	4	123,124,74,121,	0,25187,25483,25739,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	69371462	69372512	chr11:69371462-69372512	3	+	69371462	69371462	8553170	2	85,287,	0,763,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	69414306	69416832	chr11:69414306-69416832	3	+	69414306	69414306	8553170	2	1320,1104,	0,1422,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	69425689	69429621	chr11:69425689-69429621	3	+	69425689	69425689	8553170	2	117,2259,	0,1673,
#Partially deleted in new
chr11	69438364	69444743	chr11:69438364-69444743	3	-	69438364	69438364	8553170	2	489,92,	0,6287,
#Deleted in new
chr11	69467597	69469705	chr11:69467597-69469705	3	+	69467597	69467597	8553170	2	156,508,	0,1600,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	69475566	69481545	chr11:69475566-69481545	3	-	69475566	69475566	8553170	2	2047,120,	0,5859,
#Partially deleted in new
chr11	69477132	69479940	chr11:69477132-69479940	0	-	69477132	69477132	8553170	2	481,245,	0,2563,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	69481661	69493219	chr11:69481661-69493219	0	+	69481661	69481661	8553170	4	122,39,415,1119,	0,8833,9365,10439,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	69485610	69494952	chr11:69485610-69494952	3	+	69485610	69485610	789624	7	328,100,410,666,129,143,2852,	0,433,2288,4884,5702,6046,6490,
#Deleted in new
chr11	69641086	69654474	chr11:69641086-69654474	3	+	69641313	69651282	0	5	425,216,160,149,3357,	0,1944,2745,6907,10031,
#Deleted in new
chr11	69641164	69644188	chr11:69641164-69644188	0	+	69641164	69641164	8553170	3	347,216,357,	0,1866,2667,
#Deleted in new
chr11	69641205	69648240	chr11:69641205-69648240	1	+	69641313	69647999	789624	2	306,247,	0,6788,
#Deleted in new
chr11	69641230	69643317	chr11:69641230-69643317	0	+	69641230	69641230	8553170	2	281,287,	0,1800,
#Deleted in new
chr11	69643711	69648143	chr11:69643711-69648143	0	+	69643711	69643711	8553170	2	280,150,	0,4282,
#Deleted in new
chr11	69647956	69651407	chr11:69647956-69651407	0	+	69647956	69647956	8553170	2	186,290,	0,3161,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	69653075	69658430	chr11:69653075-69658430	0	-	69653075	69653075	8553170	3	241,227,1831,	0,1082,3524,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	69665562	69675347	chr11:69665562-69675347	3	-	69667518	69675239	789624	5	2025,118,71,106,158,	0,2332,6186,7653,9627,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	69665565	69675323	chr11:69665565-69675323	1	-	69667518	69675239	789624	3	2022,118,134,	0,2329,9624,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	69665565	69673384	chr11:69665565-69673384	0	-	69665565	69665565	8553170	3	2022,118,1636,	0,2329,6183,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	69665648	69668012	chr11:69665648-69668012	0	-	69667518	69668012	789624	3	761,109,118,	0,1830,2246,
#Partially deleted in new
chr11	69666666	69675321	chr11:69666666-69675321	1	-	69667518	69675239	789624	6	173,109,118,71,106,132,	0,812,1228,5082,6549,8523,
#Partially deleted in new
chr11	69667041	69671922	chr11:69667041-69671922	0	-	69667041	69667041	8553170	3	546,118,174,	0,853,4707,
#Partially deleted in new
chr11	69667263	69675305	chr11:69667263-69675305	0	-	69674705	69675239	789624	6	324,118,71,106,216,116,	0,631,4485,5952,7287,7926,
#Partially deleted in new
chr11	69667444	69674751	chr11:69667444-69674751	0	-	69667444	69667444	8553170	4	143,118,71,201,	0,450,4304,7106,
#Partially deleted in new
chr11	69667493	69675350	chr11:69667493-69675350	0	-	69668001	69675239	789624	4	94,118,71,161,	0,401,4255,7696,
#Partially deleted in new
chr11	69667505	69675322	chr11:69667505-69675322	1	-	69667864	69675239	789624	4	507,71,106,133,	0,4243,5710,7684,
#Partially deleted in new
chr11	69667510	69675247	chr11:69667510-69675247	0	-	69667955	69675239	789624	4	77,118,106,58,	0,384,5705,7679,
#Deleted in new
chr11	69667608	69668398	chr11:69667608-69668398	0	-	69667608	69667608	8553170	2	404,221,	0,569,
#Partially deleted in new
chr11	69671377	69675416	chr11:69671377-69675416	1	-	69671744	69675239	789624	3	442,106,227,	0,1838,3812,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	69672869	69675311	chr11:69672869-69675311	0	-	69672869	69672869	8553170	2	452,122,	0,2320,
#Partially deleted in new
chr11	69673221	69675295	chr11:69673221-69675295	0	-	69673221	69673221	8553170	2	100,745,	0,1329,
#Partially deleted in new
chr11	69698231	69704642	chr11:69698231-69704642	3	-	69699261	69703876	0	3	1345,104,998,	0,5029,5413,
#Deleted in new
chr11	69737297	69738017	chr11:69737297-69738017	7	-	69737297	69737297	16724991	1	720,	0,
#Deleted in new
chr11	69771015	69775403	chr11:69771015-69775403	3	-	69773308	69775084	0	3	2470,104,659,	0,3008,3729,
#Deleted in new
chr11	69773348	69775164	chr11:69773348-69775164	0	-	69773348	69773348	8553170	2	137,420,	0,1396,
#Partially deleted in new
chr11	69809968	69819024	chr11:69809968-69819024	3	-	69810304	69818933	789624	3	732,104,311,	0,6351,8745,
#Partially deleted in new
chr11	69809989	69817550	chr11:69809989-69817550	0	-	69809989	69809989	8553170	3	711,104,67,	0,6330,7494,
#Deleted in new
chr11	69909183	69910994	chr11:69909183-69910994	3	-	69909183	69909183	8553170	2	324,61,	0,1750,
#Deleted in new
chr11	69921637	69926813	chr11:69921637-69926813	3	-	69921637	69921637	8553170	2	219,80,	0,5096,
#Partially deleted in new
chr11	69985875	70015815	chr11:69985875-70015815	3	+	69985875	69985875	8553170	2	291,141,	0,29799,
#Partially deleted in new
chr11	70014866	70016450	chr11:70014866-70016450	0	-	70014866	70014866	8553170	2	345,24,	0,1560,
#Partially deleted in new
chr11	70056229	70065371	chr11:70056229-70065371	3	-	70056229	70056229	789624	2	306,1449,	0,7693,
#Partially deleted in new
chr11	70056229	70063924	chr11:70056229-70063924	0	-	70056229	70056229	789624	2	306,242,	0,7453,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	70072433	70075433	chr11:70072433-70075433	3	-	70072433	70072433	789624	2	506,498,	0,2502,
#Deleted in new
chr11	70072739	70075348	chr11:70072739-70075348	1	-	70072739	70072739	8553170	3	200,271,27,	0,2196,2582,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	70075362	70075469	chr11:70075362-70075469	3	+	70075362	70075362	8553170	1	107,	0,
#Partially deleted in new
chr11	70078301	70189528	chr11:70078301-70189528	3	+	70078606	70188004	789624	26	413,333,99,152,55,52,56,42,65,135,161,83,12,72,78,75,202,112,58,101,146,153,53,185,106,1791,	0,9450,24764,25697,27432,30051,33405,38156,46048,47759,53617,71408,74148,74755,77609,78645,82859,83320,84981,87168,88940,92585,101702,104200,107288,109436,
#Partially deleted in new
chr11	70078572	70111761	chr11:70078572-70111761	0	+	70078606	70111761	789624	6	142,333,152,55,52,55,	0,9179,25426,27161,29780,33134,
#Partially deleted in new
chr11	70085413	70163577	chr11:70085413-70163577	1	+	70085518	70163493	789624	17	129,333,99,152,55,52,56,42,65,135,161,83,72,75,202,112,295,	0,2338,17652,18585,20320,22939,26293,31044,38936,40647,46505,64296,67643,71533,75747,76208,77869,
#Partially deleted in new
chr11	70085421	70189252	chr11:70085421-70189252	1	+	70087991	70188004	789624	25	249,333,99,152,55,52,56,42,65,135,161,83,72,75,202,112,58,101,146,153,53,185,106,360,184,	0,2330,17644,18577,20312,22931,26285,31036,38928,40639,46497,64288,67635,71525,75739,76200,77861,80048,81820,85465,94582,97080,100168,102316,103647,
#Partially deleted in new
chr11	70103096	70132033	chr11:70103096-70132033	0	+	70103096	70132033	789624	10	68,152,55,52,66,56,42,65,135,115,	0,902,2637,5256,8029,8610,13361,21253,22964,28822,
#Partially deleted in new
chr11	70104128	70116579	chr11:70104128-70116579	0	+	70104128	70104128	8553170	5	22,55,52,56,122,	0,1605,4224,7578,12329,
#Partially deleted in new
chr11	70108184	70189252	chr11:70108184-70189252	1	+	70108400	70188004	789624	20	220,56,42,65,135,161,83,12,72,75,202,112,58,101,146,153,53,185,106,1515,	0,3522,8273,16165,17876,23734,41525,44265,44872,48762,52976,53437,55098,57285,59057,62702,71819,74317,77405,79553,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	70129296	70149623	chr11:70129296-70149623	3	+	70129296	70129296	8553170	2	422,75,	0,20252,
#Partially deleted in new
chr11	70141593	70161642	chr11:70141593-70161642	0	+	70149720	70161642	789624	7	112,83,12,72,75,202,21,	0,8116,10856,11463,15353,19567,20028,
#Partially deleted in new
chr11	70165361	70180045	chr11:70165361-70180045	0	+	70165361	70165361	8553170	4	209,146,153,42,	0,1880,5525,14642,
#Partially deleted in new
chr11	70169964	70188066	chr11:70169964-70188066	0	+	70169964	70169964	8553170	6	203,153,53,185,106,329,	0,922,10039,12537,15625,17773,
#Deleted in new
chr11	70187787	70188509	chr11:70187787-70188509	3	-	70187787	70187787	8553170	2	169,477,	0,245,
#Partially deleted in new
chr11	70203162	70207390	chr11:70203162-70207390	3	+	70203459	70206473	0	2	583,1258,	0,2970,
#Deleted in new
chr11	70206290	70207390	chr11:70206290-70207390	3	-	70206290	70206290	8553170	2	644,332,	0,768,
#Deleted in new
chr11	70206570	70207387	chr11:70206570-70207387	0	-	70206570	70206570	8553170	2	399,320,	0,497,
#Partially deleted in new
chr11	70270699	70384400	chr11:70270699-70384400	3	+	70272172	70382146	0	28	215,264,102,165,75,102,222,147,135,84,132,63,80,136,224,232,152,173,94,82,201,176,98,176,69,166,71,1398,	0,1473,53702,54147,54800,55562,55897,59473,61260,62770,64863,66665,67674,68471,72969,77489,83601,84939,85461,91395,91588,101515,101777,104218,105832,107330,111388,112303,
#Partially deleted in new
chr11	70270716	70378580	chr11:70270716-70378580	1	+	70272172	70378203	0	26	198,264,102,165,75,102,222,147,135,84,132,63,80,136,224,232,152,173,94,82,201,176,98,176,69,551,	0,1456,53685,54130,54783,55545,55880,59456,61243,62753,64846,66648,67657,68454,72952,77472,83584,84922,85444,91378,91571,101498,101760,104201,105815,107313,
#Partially deleted in new
chr11	70270772	70384387	chr11:70270772-70384387	0	+	70272172	70343732	789624	29	142,264,102,165,75,102,222,147,135,84,132,63,61,136,224,232,30,152,173,94,82,201,176,98,176,69,166,71,1385,	0,1400,53629,54074,54727,55489,55824,59400,61187,62697,64790,66592,67601,68398,72896,77416,80221,83528,84866,85388,91322,91515,101442,101704,104145,105759,107257,111315,112230,
#Partially deleted in new
chr11	70271219	70324955	chr11:70271219-70324955	0	+	70272172	70324955	789624	4	100,264,102,109,	0,953,53182,53627,
#Partially deleted in new
chr11	70271906	70324434	chr11:70271906-70324434	0	+	70272172	70324434	789624	2	530,33,	0,52495,
#Partially deleted in new
chr11	70271921	70385312	chr11:70271921-70385312	0	+	70272172	70324480	8553170	33	515,158,102,165,75,102,222,147,135,75,84,132,63,80,136,224,232,30,152,173,94,82,201,63,27,176,98,170,176,69,166,71,2310,	0,50475,52480,52925,53578,54340,54675,58251,60038,61100,61548,63641,65443,66452,67249,71747,76267,79072,82379,83717,84239,90173,90366,93451,94019,100293,100555,102738,102996,104610,106108,110166,111081,
#Partially deleted in new
chr11	70272227	70385312	chr11:70272227-70385312	0	+	70272227	70382146	789624	30	209,102,165,75,102,222,147,135,84,132,63,80,136,224,232,30,152,173,94,82,201,63,27,176,98,176,69,166,71,2310,	0,52174,52619,53272,54034,54369,57945,59732,61242,63335,65137,66146,66943,71441,75961,78766,82073,83411,83933,89867,90060,93145,93713,99987,100249,102690,104304,105802,109860,110775,
#Deleted in new
chr11	70278920	70279297	chr11:70278920-70279297	7	-	70278920	70278920	16724991	1	377,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	70282366	70363368	chr11:70282366-70363368	3	-	70282366	70282366	8553170	2	46,493,	0,80509,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	70283954	70284070	chr11:70283954-70284070	3	+	70283954	70283954	5263520	1	116,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	70319927	70321415	chr11:70319927-70321415	3	+	70319927	70319927	8553170	2	271,151,	0,1337,
#Partially deleted in new
chr11	70324870	70327209	chr11:70324870-70327209	3	-	70324870	70324870	8553170	2	257,110,	0,2229,
#Partially deleted in new
chr11	70326343	70384403	chr11:70326343-70384403	0	+	70326343	70343732	789624	27	20,222,147,135,75,84,132,63,80,141,224,232,30,152,173,94,82,201,63,27,179,98,176,69,166,71,1401,	0,253,3829,5616,6678,7126,9219,11021,12030,12827,17325,21845,24650,27957,29295,29817,35751,35944,39029,39597,45868,46133,48574,50188,51686,55744,56659,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	70329892	70332046	chr11:70329892-70332046	0	+	70329892	70329892	8553170	2	427,87,	0,2067,
#Partially deleted in new
chr11	70334351	70339201	chr11:70334351-70339201	0	+	70334351	70334351	8553170	5	281,132,63,80,31,	0,1211,3013,4022,4819,
#Partially deleted in new
chr11	70335612	70356205	chr11:70335612-70356205	0	+	70335612	70356205	789624	7	82,63,80,136,131,173,45,	0,1752,2761,3558,18709,20026,20548,
#Partially deleted in new
chr11	70337396	70348300	chr11:70337396-70348300	0	+	70337396	70343732	789624	5	31,61,136,224,112,	0,977,1774,6272,10792,
#Partially deleted in new
chr11	70340976	70355741	chr11:70340976-70355741	0	+	70340976	70340976	8553170	6	121,224,232,30,152,103,	0,2692,7212,10017,13324,14662,
#Partially deleted in new
chr11	70340995	70356254	chr11:70340995-70356254	0	+	70340995	70340995	8553170	6	102,224,232,152,173,94,	0,2673,7193,13305,14643,15165,
#Partially deleted in new
chr11	70341006	70355736	chr11:70341006-70355736	0	+	70341006	70341006	8553170	4	91,232,152,98,	0,7182,13294,14632,
#Partially deleted in new
chr11	70341872	70348261	chr11:70341872-70348261	0	+	70341872	70341872	8553170	3	271,224,73,	0,1796,6316,
#Partially deleted in new
chr11	70343750	70362463	chr11:70343750-70362463	0	+	70343750	70362463	789624	8	142,232,117,152,173,94,82,176,	0,4438,6172,10550,11888,12410,18344,18537,
#Partially deleted in new
chr11	70345914	70355712	chr11:70345914-70355712	0	+	70345914	70348193	789624	4	95,232,152,74,	0,2274,8386,9724,
#Partially deleted in new
chr11	70348374	70362472	chr11:70348374-70362472	0	+	70348374	70350017	789624	8	46,117,30,152,173,94,82,185,	0,1548,2619,5926,7264,7786,13720,13913,
#Partially deleted in new
chr11	70354202	70362175	chr11:70354202-70362175	0	+	70354202	70354202	8553170	4	250,173,94,81,	0,1436,1958,7892,
#Partially deleted in new
chr11	70355703	70372539	chr11:70355703-70372539	0	+	70355703	70372539	789624	8	108,94,82,201,63,27,176,63,	0,457,6391,6584,9669,10237,16511,16773,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	70358197	70358677	chr11:70358197-70358677	3	-	70358197	70358197	8553170	2	52,342,	0,138,
#Partially deleted in new
chr11	70362134	70362795	chr11:70362134-70362795	0	+	70362134	70362134	8553170	2	42,508,	0,153,
#Partially deleted in new
chr11	70364341	70384394	chr11:70364341-70384394	0	+	70364341	70364341	8553170	8	1626,176,98,176,69,166,71,1392,	0,7873,8135,10576,12190,13688,17746,18661,
#Partially deleted in new
chr11	70367505	70372534	chr11:70367505-70372534	0	+	70367505	70367505	8553170	3	124,176,58,	0,4709,4971,
#Partially deleted in new
chr11	70371326	70384394	chr11:70371326-70384394	0	+	70371326	70371326	8553170	7	1064,98,176,69,166,71,1392,	0,1150,3591,5205,6703,10761,11676,
#Partially deleted in new
chr11	70372245	70398362	chr11:70372245-70398362	0	-	70372245	70372245	8553170	2	289,265,	0,25852,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	70373409	70398488	chr11:70373409-70398488	3	-	70373409	70373409	8553170	2	2211,391,	0,24688,
#Partially deleted in new
chr11	70378077	70383629	chr11:70378077-70383629	0	+	70378077	70383180	789624	2	118,627,	0,4925,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	70381090	70398302	chr11:70381090-70398302	0	-	70381090	70381090	8553170	2	187,205,	0,17007,
#Partially deleted in new
chr11	70398403	70436584	chr11:70398403-70436584	3	+	70407297	70435162	0	17	211,97,87,74,130,111,55,111,111,111,56,70,149,90,178,72,1559,	0,6861,8894,9114,11427,16138,17259,18609,21342,21996,24536,26928,30647,32787,34697,35243,36622,
#Partially deleted in new
chr11	70398505	70436575	chr11:70398505-70436575	1	+	70407297	70435162	0	18	109,97,87,74,130,111,55,111,111,111,111,56,70,149,90,178,72,1550,	0,6759,8792,9012,11325,16036,17157,18507,21240,21894,22964,24434,26826,30545,32685,34595,35141,36520,
#Partially deleted in new
chr11	70398536	70408342	chr11:70398536-70408342	0	+	70398536	70398536	8553170	4	78,97,87,825,	0,6728,8761,8981,
#Partially deleted in new
chr11	70398536	70410430	chr11:70398536-70410430	0	+	70398536	70398536	8553170	6	78,97,87,74,130,131,	0,6728,8761,8981,11294,11763,
#Partially deleted in new
chr11	70398540	70436579	chr11:70398540-70436579	1	+	70407297	70436408	0	19	74,97,87,74,130,111,55,111,111,111,56,70,149,90,178,72,94,279,298,	0,6724,8757,8977,11290,16001,17122,18472,21205,21859,24399,26791,30510,32650,34560,35106,36485,36925,37741,
#Partially deleted in new
chr11	70407352	70420253	chr11:70407352-70420253	0	+	70407352	70407352	8553170	7	32,74,130,111,55,111,508,	0,165,2478,7189,8310,9660,12393,
#Deleted in new
chr11	70414610	70416204	chr11:70414610-70416204	0	+	70414610	70414610	8553170	2	42,542,	0,1052,
#Partially deleted in new
chr11	70416739	70419842	chr11:70416739-70419842	0	+	70416739	70416739	8553170	2	384,97,	0,3006,
#Partially deleted in new
chr11	70420124	70429125	chr11:70420124-70429125	0	+	70420124	70420124	8553170	4	386,56,70,75,	0,2815,5207,8926,
#Deleted in new
chr11	70420222	70421917	chr11:70420222-70421917	0	+	70420222	70420222	8553170	2	288,448,	0,1247,
#Partially deleted in new
chr11	70420385	70429199	chr11:70420385-70429199	0	+	70420385	70420385	8553170	5	125,123,56,70,149,	0,2123,2554,4946,8665,
#Deleted in new
chr11	70421595	70425401	chr11:70421595-70425401	0	+	70421595	70421595	8553170	2	1400,70,	0,3736,
#Partially deleted in new
chr11	70422502	70435981	chr11:70422502-70435981	0	+	70422502	70422502	8553170	9	90,56,70,149,90,178,72,94,516,	0,437,2829,6548,8688,10598,11144,12523,12963,
#Partially deleted in new
chr11	70429052	70436562	chr11:70429052-70436562	0	+	70429052	70436408	789624	7	147,90,178,72,94,90,281,	0,2138,4048,4594,5973,6413,7229,
#Partially deleted in new
chr11	70429121	70435152	chr11:70429121-70435152	0	+	70429121	70433665	789624	5	78,90,178,94,127,	0,2069,3979,4503,5904,
#Partially deleted in new
chr11	70467855	70662197	chr11:70467855-70662197	1	-	70472868	70661764	789624	10	5584,2407,21,112,131,9,81,136,125,602,	0,17458,21472,22420,24479,34067,34350,34940,191972,193740,
#Partially deleted in new
chr11	70467855	70661818	chr11:70467855-70661818	1	-	70472868	70661767	789624	10	5584,2407,21,112,131,30,81,136,125,223,	0,17458,21472,22420,24479,32714,34350,34940,191972,193740,
#Deleted in new
chr11	70469432	70475170	chr11:70469432-70475170	0	-	70469432	70469432	8553170	1	5738,	0,
#Partially deleted in new
chr11	70469434	70661818	chr11:70469434-70661818	1	-	70472868	70661767	789624	11	4005,2407,21,112,131,21,9,81,136,125,223,	0,15879,19893,20841,22900,31135,32488,32771,33361,190393,192161,
#Partially deleted in new
chr11	70469434	70502859	chr11:70469434-70502859	0	-	70472868	70502859	789624	7	4005,2407,21,112,131,81,64,	0,15879,19893,20841,22900,32771,33361,
#Partially deleted in new
chr11	70469434	71224762	chr11:70469434-71224762	3	-	70472868	71147326	789624	25	4005,2407,21,112,131,21,9,81,136,125,83,76,114,170,319,67,78,117,168,152,109,72,204,219,66,	0,15879,19893,20841,22900,31135,32488,32771,33361,190393,192161,229253,329008,337567,350929,427066,587046,605724,622987,625102,640506,643858,649394,677685,755262,
#Partially deleted in new
chr11	70472818	70661762	chr11:70472818-70661762	1	-	70473422	70661728	789624	8	621,85,131,27,81,136,125,167,	0,17484,19516,27751,29387,29977,187009,188777,
#Partially deleted in new
chr11	70472818	70661762	chr11:70472818-70661762	0	-	70473422	70661762	789624	9	621,85,131,21,9,81,136,125,167,	0,17484,19516,27751,29104,29387,29977,187009,188777,
#Deleted in new
chr11	70477276	70477592	chr11:70477276-70477592	3	-	70477276	70477276	8553170	2	183,23,	0,293,
#Partially deleted in new
chr11	70489012	70661840	chr11:70489012-70661840	1	-	70490216	70661767	789624	8	1375,131,21,9,81,136,125,245,	0,3322,11557,12910,13193,13783,170815,172583,
#Partially deleted in new
chr11	70490166	70661840	chr11:70490166-70661840	1	-	70490216	70661767	789624	6	221,131,81,136,125,245,	0,2168,12039,12629,169661,171429,
#Partially deleted in new
chr11	70492431	70698769	chr11:70492431-70698769	0	-	70492431	70698769	789624	5	34,136,125,83,82,	0,10364,167396,169164,206256,
#Partially deleted in new
chr11	70566386	70659910	chr11:70566386-70659910	0	-	70566386	70566386	8553170	4	238,152,49,83,	0,4175,4906,93441,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	70603303	70604859	chr11:70603303-70604859	3	+	70603303	70603303	8553170	1	1556,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	70631093	70635490	chr11:70631093-70635490	3	+	70631093	70631093	789624	3	141,154,1957,	0,683,2440,
#Partially deleted in new
chr11	70646164	70647562	chr11:70646164-70647562	3	+	70646164	70646164	8553170	2	134,222,	0,1176,
#Partially deleted in new
chr11	70654145	70807074	chr11:70654145-70807074	0	-	70654145	70654145	8553170	6	291,125,83,76,114,73,	0,5682,7450,44542,144297,152856,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	70667838	70826757	chr11:70667838-70826757	0	-	70826534	70826757	789624	6	1805,76,114,170,319,291,	0,30849,130604,139163,152525,158628,
#Partially deleted in new
chr11	70698078	70807139	chr11:70698078-70807139	0	-	70698078	70698078	8553170	4	182,76,114,138,	0,609,100364,108923,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	70705166	70705269	chr11:70705166-70705269	3	-	70705166	70705166	8553170	1	103,	0,
#Deleted in new
chr11	70705604	70706068	chr11:70705604-70706068	3	-	70705604	70705604	8553170	1	464,	0,
#Partially deleted in new
chr11	70798442	70951071	chr11:70798442-70951071	0	-	70798442	70798442	8553170	5	114,170,319,67,66,	0,8559,21921,98058,152563,
#Partially deleted in new
chr11	70807048	70873122	chr11:70807048-70873122	0	-	70807048	70873122	789624	3	123,319,115,	0,13315,65959,
#Partially deleted in new
chr11	70820363	70896567	chr11:70820363-70896567	0	-	70820363	70896567	789624	3	319,171,67,	0,75033,76137,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	70862789	70865115	chr11:70862789-70865115	3	+	70862789	70862789	789624	3	78,277,1328,	0,495,998,
#Deleted in new
chr11	70872269	70872368	chr11:70872269-70872368	3	-	70872269	70872269	5263520	1	99,	0,
#Partially deleted in new
chr11	70896384	71092477	chr11:70896384-71092477	0	-	70896492	71092477	789624	4	183,78,117,56,	0,160096,178774,196037,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	70907634	71252577	chr11:70907634-71252577	0	-	71113338	71147326	789624	13	458,78,117,168,152,109,72,18,130,219,100,105,153,	0,148846,167524,184787,186902,202306,205658,211194,211268,239485,317062,318930,344790,
#Partially deleted in new
chr11	70952701	71094688	chr11:70952701-71094688	0	-	70952701	71094688	789624	5	120,78,117,168,152,	0,103779,122457,139720,141835,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	71174692	71240924	chr11:71174692-71240924	0	-	71174692	71174692	8553170	3	152,100,129,	0,50004,66103,
#Partially deleted in new
chr11	71382600	71407772	chr11:71382600-71407772	7	-	71382600	71382600	16724991	8	144,166,202,162,85,111,129,117,	0,6733,8785,11196,12665,15688,19143,25055,
#Partially deleted in new
chr11	71391485	71398306	chr11:71391485-71398306	4	-	71391485	71391485	16724991	4	102,162,85,18,	0,2311,3780,6803,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	71405745	71423354	chr11:71405745-71423354	4	-	71405745	71405745	16724991	3	2037,104,21,	0,16055,17588,
#Partially deleted in new
chr11	71414159	71423423	chr11:71414159-71423423	5	-	71414159	71414159	16724991	3	266,104,90,	0,7641,9174,
#Partially deleted in new
chr11	71428192	71439065	chr11:71428192-71439065	0	-	71428822	71439065	789624	3	660,132,187,	0,9619,10686,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	71434413	71448435	chr11:71434413-71448435	3	-	71435374	71444952	789624	9	1426,132,205,214,91,223,104,125,146,	0,3398,4465,6813,7849,9579,10441,13196,13876,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	71434413	71448393	chr11:71434413-71448393	1	-	71435374	71444952	789624	9	1426,132,205,214,91,223,104,125,81,	0,3398,4465,6813,7849,9579,10441,13196,13899,
#Partially deleted in new
chr11	71434964	71438959	chr11:71434964-71438959	0	-	71435135	71438959	789624	4	226,398,132,81,	0,477,2847,3914,
#Partially deleted in new
chr11	71435307	71439076	chr11:71435307-71439076	0	-	71435565	71439076	789624	3	666,132,198,	0,2504,3571,
#Partially deleted in new
chr11	71437902	71448387	chr11:71437902-71448387	0	-	71437902	71444952	789624	8	41,205,214,91,127,104,125,98,	0,976,3324,4360,6090,6952,9707,10387,
#Deleted in new
chr11	71438748	71441347	chr11:71438748-71441347	0	-	71438748	71438748	8553170	2	335,121,	0,2478,
#Partially deleted in new
chr11	71441359	71448078	chr11:71441359-71448078	0	-	71441359	71444952	789624	5	81,91,223,104,469,	0,903,2633,3495,6250,
#Partially deleted in new
chr11	71443992	71448344	chr11:71443992-71448344	0	-	71443992	71444952	789624	4	223,104,125,68,	0,862,3617,4284,
#Partially deleted in new
chr11	71443996	71448356	chr11:71443996-71448356	0	-	71443996	71444952	789624	4	219,104,117,67,	0,858,3613,4293,
#Partially deleted in new
chr11	71444033	71448365	chr11:71444033-71448365	0	-	71444033	71444253	789624	4	220,104,125,76,	0,821,3576,4256,
#Partially deleted in new
chr11	71444040	71452868	chr11:71444040-71452868	0	-	71444040	71444952	789624	4	175,104,125,175,	0,814,3569,8653,
#Partially deleted in new
chr11	71453108	71501816	chr11:71453108-71501816	3	+	71453296	71501352	789624	21	273,61,117,54,90,52,89,118,132,75,125,49,103,169,136,107,132,70,129,177,515,	0,2001,5319,10323,10944,19340,20169,20460,21286,25286,27646,28247,28814,29740,31203,32433,37736,38725,44374,45243,48193,
#Partially deleted in new
chr11	71453108	71459056	chr11:71453108-71459056	0	+	71453108	71453108	8553170	3	273,61,629,	0,2001,5319,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	71453208	71455460	chr11:71453208-71455460	0	+	71453208	71453208	8553170	2	173,351,	0,1901,
#Partially deleted in new
chr11	71453210	71473294	chr11:71453210-71473294	0	+	71453296	71458548	789624	7	171,61,129,54,90,52,17,	0,1899,5217,10221,10842,19238,20067,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	71453216	71477225	chr11:71453216-71477225	0	+	71453296	71474613	789624	10	165,61,117,54,90,52,89,118,1228,1025,	0,1893,5211,10215,10836,19232,20061,20352,21178,22984,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	71453230	71464508	chr11:71453230-71464508	0	+	71453230	71453230	8553170	5	151,61,117,54,456,	0,1879,5197,10201,10822,
#Partially deleted in new
chr11	71453230	71472491	chr11:71453230-71472491	0	+	71453230	71453230	8553170	7	151,61,117,54,90,43,43,	0,1879,5197,10201,10822,13493,19218,
#Partially deleted in new
chr11	71453240	71460075	chr11:71453240-71460075	0	+	71453240	71453240	8553170	4	141,61,117,401,	0,1869,5187,6434,
#Partially deleted in new
chr11	71453355	71460947	chr11:71453355-71460947	0	+	71453355	71453355	8553170	5	26,61,117,173,226,	0,1754,5072,6685,7366,
#Partially deleted in new
chr11	71455124	71501541	chr11:71455124-71501541	0	+	71455124	71476113	789624	21	46,117,54,90,52,89,118,132,1406,75,125,49,103,169,136,107,132,70,129,177,240,	0,3303,8307,8928,17324,18153,18444,19270,20908,23270,25630,26231,26798,27724,29187,30417,35720,36709,42358,43227,46177,
#Deleted in new
chr11	71473502	71473568	chr11:71473502-71473568	3	+	71473502	71473502	5263520	1	66,	0,
#Partially deleted in new
chr11	71473662	71479082	chr11:71473662-71479082	0	+	71473662	71473662	8553170	3	24,132,688,	0,732,4732,
#Partially deleted in new
chr11	71474394	71482986	chr11:71474394-71482986	0	+	71474394	71480837	789624	7	132,94,75,125,49,103,138,	0,2950,4000,6360,6961,7528,8454,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	71479293	71501539	chr11:71479293-71501539	1	+	71481988	71501352	789624	12	981,125,49,103,169,136,107,132,70,129,177,238,	0,1461,2062,2629,3555,5018,6248,11551,12540,18189,19058,22008,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	71480148	71490876	chr11:71480148-71490876	0	+	71480148	71480148	8553170	8	126,125,49,25,169,136,107,32,	0,606,1207,1852,2700,4163,5393,10696,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	71480151	71481430	chr11:71480151-71481430	0	+	71480151	71480151	8553170	2	123,676,	0,603,
#Partially deleted in new
chr11	71480810	71498728	chr11:71480810-71498728	0	+	71480810	71480810	8553170	7	1215,169,1337,132,70,129,377,	0,2038,3501,10034,11023,16672,17541,
#Deleted in new
chr11	71482722	71484392	chr11:71482722-71484392	0	+	71482722	71482722	8553170	2	295,81,	0,1589,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	71496434	71500035	chr11:71496434-71500035	0	+	71496434	71496434	8553170	2	1177,1684,	0,1917,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	71498401	71524107	chr11:71498401-71524107	0	+	71498401	71501352	789624	4	127,125,115,112,	0,2900,22688,25594,
#Deleted in new
chr11	71503544	71504478	chr11:71503544-71504478	0	+	71503544	71503544	8553170	2	197,413,	0,521,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	71503863	71505874	chr11:71503863-71505874	0	+	71503863	71503863	8553170	1	2011,	0,
#Deleted in new
chr11	71506060	71506380	chr11:71506060-71506380	7	-	71506060	71506060	16724991	1	320,	0,
#Deleted in new
chr11	71527266	71528674	chr11:71527266-71528674	3	+	71527300	71527798	789624	1	1408,	0,
#Partially deleted in new
chr11	71538024	71539207	chr11:71538024-71539207	3	+	71538055	71538619	789624	1	1183,	0,
#Partially deleted in new
chr11	71548417	71549553	chr11:71548417-71549553	3	+	71548657	71549167	789624	1	1136,	0,
#Partially deleted in new
chr11	71565562	71566738	chr11:71565562-71566738	3	+	71565587	71566196	789624	1	1176,	0,
#Partially deleted in new
chr11	71568679	71568934	chr11:71568679-71568934	7	+	71568679	71568679	16724991	1	255,	0,
#Partially deleted in new
chr11	71579713	71582837	chr11:71579713-71582837	3	-	71579713	71582837	789624	2	121,437,	0,2687,
#Partially deleted in new
chr11	71579727	71579848	chr11:71579727-71579848	7	-	71579727	71579727	16724991	1	121,	0,
#Partially deleted in new
chr11	71581854	71582875	chr11:71581854-71582875	1	-	71582366	71582837	789624	1	1021,	0,
#Partially deleted in new
chr11	71581909	71603353	chr11:71581909-71603353	0	-	71581909	71581909	8553170	3	248,329,51,	0,17087,21393,
#Partially deleted in new
chr11	71593453	71594382	chr11:71593453-71594382	7	+	71593453	71593453	16724991	1	929,	0,
#Partially deleted in new
chr11	71603259	71608040	chr11:71603259-71608040	7	+	71603259	71603259	16724991	3	275,119,749,	0,2089,4032,
#Partially deleted in new
chr11	71603260	71607592	chr11:71603260-71607592	5	+	71603260	71603260	16724991	3	271,118,301,	0,2087,4031,
#Deleted in new
chr11	71620019	71621032	chr11:71620019-71621032	7	+	71620019	71620019	16724991	1	1013,	0,
#Deleted in new
chr11	71629044	71629421	chr11:71629044-71629421	7	+	71629044	71629044	16724991	1	377,	0,
#Deleted in new
chr11	71639550	71639769	chr11:71639550-71639769	7	+	71639550	71639550	16724991	1	219,	0,
#Partially deleted in new
chr11	71669519	71670297	chr11:71669519-71670297	7	+	71669519	71669519	16724991	1	778,	0,
#Deleted in new
chr11	71690452	71690657	chr11:71690452-71690657	7	-	71690452	71690452	16724991	1	205,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	71722051	71781183	chr11:71722051-71781183	7	+	71722051	71722051	16724991	5	260,98,646,215,126,	0,9370,50056,58068,59006,
#Partially deleted in new
chr11	71722281	71731519	chr11:71722281-71731519	4	+	71722281	71722281	16724991	2	27,98,	0,9140,
#Partially deleted in new
chr11	71787509	71801234	chr11:71787509-71801234	1	+	71787536	71799647	789624	4	123,63,150,1674,	0,2273,8507,12051,
#Partially deleted in new
chr11	71787510	71796940	chr11:71787510-71796940	0	+	71787536	71791738	789624	5	122,63,84,102,924,	0,2272,4225,5869,8506,
#Partially deleted in new
chr11	71787513	71801236	chr11:71787513-71801236	1	+	71787536	71799647	789624	5	119,63,102,150,1676,	0,2269,5866,8503,12047,
#Partially deleted in new
chr11	71787513	71800724	chr11:71787513-71800724	0	+	71787536	71791738	789624	5	119,63,84,150,1164,	0,2269,4222,8503,12047,
#Partially deleted in new
chr11	71787517	71800103	chr11:71787517-71800103	3	+	71787536	71799647	789624	5	115,63,81,150,543,	0,2265,4221,8499,12043,
#Partially deleted in new
chr11	71787536	71800099	chr11:71787536-71800099	0	+	71787536	71796235	789624	4	96,63,292,539,	0,2246,8480,12024,
#Partially deleted in new
chr11	71794362	71813845	chr11:71794362-71813845	0	-	71794362	71794362	789624	4	892,115,64,503,	0,8495,13230,18980,
#Partially deleted in new
chr11	71795961	71813446	chr11:71795961-71813446	0	-	71795961	71795961	789624	4	164,115,64,104,	0,6896,11631,17381,
#Partially deleted in new
chr11	71800540	71804640	chr11:71800540-71804640	7	-	71800540	71800540	16724991	4	247,76,115,111,	0,1239,2317,3989,
#Partially deleted in new
chr11	71807590	71818238	chr11:71807590-71818238	0	-	71807590	71807590	8553170	3	66,187,86,	0,9319,10562,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	71810300	71813859	chr11:71810300-71813859	3	-	71810300	71810300	789624	2	1648,517,	0,3042,
#Partially deleted in new
chr11	71814044	71821548	chr11:71814044-71821548	3	-	71816511	71821476	789624	5	3052,83,96,127,84,	0,4108,4728,5600,7420,
#Deleted in new
chr11	71833199	71837562	chr11:71833199-71837562	3	+	71833199	71837562	789624	2	58,164,	0,4199,
#Deleted in new
chr11	71834711	71837710	chr11:71834711-71837710	0	+	71834711	71834711	8553170	3	147,149,312,	0,2312,2687,
#Deleted in new
chr11	71845195	71845245	chr11:71845195-71845245	7	-	71845195	71845195	16724991	1	50,	0,
#Partially deleted in new
chr11	71856276	71863658	chr11:71856276-71863658	7	+	71856276	71856276	16724991	2	58,179,	0,7203,
#Partially deleted in new
chr11	71856276	71863653	chr11:71856276-71863653	5	+	71856276	71856276	16724991	2	61,169,	0,7208,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	71865508	71918957	chr11:71865508-71918957	0	-	71865836	71918957	789624	4	346,179,156,73,	0,50565,52112,53376,
#Partially deleted in new
chr11	71878452	71884561	chr11:71878452-71884561	3	+	71878452	71884561	789624	2	58,155,	0,5954,
#Partially deleted in new
chr11	71884312	71928595	chr11:71884312-71928595	1	-	71884614	71928586	789624	5	309,179,156,142,147,	0,31761,33308,34572,44136,
#Deleted in new
chr11	71893409	71894433	chr11:71893409-71894433	7	+	71893409	71893409	16724991	1	1024,	0,
#Deleted in new
chr11	71903193	71904081	chr11:71903193-71904081	7	+	71903193	71903193	16724991	1	888,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	71916594	71928654	chr11:71916594-71928654	3	-	71917534	71923353	789624	4	1182,142,167,290,	0,2290,6714,11770,
#Partially deleted in new
chr11	71917697	71928624	chr11:71917697-71928624	0	-	71917697	71923353	789624	4	79,142,167,176,	0,1187,5611,10751,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	71917716	71928403	chr11:71917716-71928403	0	-	71917716	71923353	789624	5	60,142,167,172,39,	0,1168,5592,8216,10648,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	71918923	71928594	chr11:71918923-71928594	0	-	71918923	71923353	789624	4	103,167,172,146,	0,4385,7009,9525,
#Deleted in new
chr11	71927577	71928447	chr11:71927577-71928447	0	-	71927577	71927577	8553170	2	458,83,	0,787,
#Partially deleted in new
chr11	71928700	71997595	chr11:71928700-71997595	3	+	71929061	71996315	789624	9	424,38,142,155,108,121,134,102,1401,	0,28526,32049,54060,58303,61896,66018,66749,67494,
#Partially deleted in new
chr11	71929017	71990663	chr11:71929017-71990663	0	+	71929061	71982809	789624	6	107,38,142,109,108,67,	0,28209,31732,53789,57986,61579,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	71929026	71987028	chr11:71929026-71987028	0	+	71929061	71978184	789624	6	98,38,142,150,155,25,	0,28200,31723,49059,53734,57977,
#Partially deleted in new
chr11	71929026	71996275	chr11:71929026-71996275	0	+	71929119	71987015	789624	7	98,142,108,121,134,102,81,	0,31723,57977,61570,65692,66423,67168,
#Partially deleted in new
chr11	71929031	71996593	chr11:71929031-71996593	1	+	71929119	71996315	789624	5	93,142,134,102,399,	0,31718,65687,66418,67163,
#Partially deleted in new
chr11	71929033	71997597	chr11:71929033-71997597	1	+	71929119	71995526	789624	7	91,142,155,108,121,112,1403,	0,31716,53727,57970,61563,66406,67161,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	71929045	71994777	chr11:71929045-71994777	0	+	71929045	71929045	8553170	8	79,38,142,138,155,108,121,59,	0,28181,31704,33106,53715,57958,61551,65673,
#Partially deleted in new
chr11	71929046	71990796	chr11:71929046-71990796	0	+	71929046	71929046	8553170	6	78,38,142,155,108,200,	0,28180,31703,53714,57957,61550,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	71929050	71997595	chr11:71929050-71997595	0	+	71929119	71962154	789624	9	74,142,138,155,108,121,134,102,1401,	0,31699,33101,53710,57953,61546,65668,66399,67144,
#Partially deleted in new
chr11	71929075	71996420	chr11:71929075-71996420	0	+	71929075	71994807	789624	7	49,38,142,121,134,102,226,	0,28151,31674,61521,65643,66374,67119,
#Partially deleted in new
chr11	71929081	71997591	chr11:71929081-71997591	1	+	71929119	71996315	789624	8	43,142,155,108,121,134,102,1397,	0,31668,53679,57922,61515,65637,66368,67113,
#Partially deleted in new
chr11	71938670	71939544	chr11:71938670-71939544	7	-	71938670	71938670	16724991	2	226,334,	0,540,
#Partially deleted in new
chr11	71957238	71983170	chr11:71957238-71983170	0	+	71957238	71957238	8553170	3	26,142,410,	0,3511,25522,
#Partially deleted in new
chr11	71983656	71990702	chr11:71983656-71990702	0	+	71983656	71983656	8553170	3	114,108,106,	0,3347,6940,
#Deleted in new
chr11	71995245	71996522	chr11:71995245-71996522	0	+	71995245	71995245	8553170	2	306,328,	0,949,
#Deleted in new
chr11	71998540	72002527	chr11:71998540-72002527	3	+	71999984	72001861	789624	6	479,86,207,124,148,744,	0,1386,1810,2660,2864,3243,
#Deleted in new
chr11	71998612	72003753	chr11:71998612-72003753	1	+	71999984	72001645	789624	4	1400,207,124,2349,	0,1738,2588,2792,
#Deleted in new
chr11	71998891	72002527	chr11:71998891-72002527	1	+	71999984	72001861	789624	7	128,112,86,207,124,148,744,	0,367,1035,1459,2309,2513,2892,
#Deleted in new
chr11	71998908	71999938	chr11:71998908-71999938	0	+	71998908	71998908	8553170	3	111,435,12,	0,319,1018,
#Deleted in new
chr11	71998908	71999701	chr11:71998908-71999701	0	+	71998908	71998908	8553170	2	111,474,	0,319,
#Deleted in new
chr11	71998910	71999708	chr11:71998910-71999708	0	+	71998910	71998910	8553170	2	109,450,	0,348,
#Deleted in new
chr11	71998911	72002527	chr11:71998911-72002527	1	+	71999984	72001861	789624	8	108,143,46,86,207,124,148,744,	0,316,705,1015,1439,2289,2493,2872,
#Deleted in new
chr11	71998911	72002804	chr11:71998911-72002804	1	+	71999984	72001896	789624	6	108,86,207,124,20,1021,	0,1015,1439,2289,2493,2872,
#Deleted in new
chr11	71998924	72001745	chr11:71998924-72001745	1	+	71999984	72001645	789624	5	95,86,207,124,341,	0,1002,1426,2276,2480,
#Deleted in new
chr11	71998928	72005715	chr11:71998928-72005715	0	+	71999984	72001896	789624	7	91,86,207,124,20,1021,171,	0,998,1422,2272,2476,2855,6616,
#Deleted in new
chr11	71999062	72002526	chr11:71999062-72002526	1	+	71999984	72001861	789624	5	950,207,124,148,743,	0,1288,2138,2342,2721,
#Deleted in new
chr11	71999600	72002697	chr11:71999600-72002697	0	+	71999984	72001861	789624	6	412,207,124,148,165,145,	0,750,1600,1804,2183,2952,
#Deleted in new
chr11	71999616	72002526	chr11:71999616-72002526	1	+	71999984	72001861	789624	6	46,86,207,124,148,743,	0,310,734,1584,1788,2167,
#Deleted in new
chr11	71999926	72002527	chr11:71999926-72002527	1	+	71999984	72001896	789624	3	86,207,744,	0,424,1857,
#Partially deleted in new
chr11	72002863	72080389	chr11:72002863-72080389	1	-	72003526	72035943	0	25	675,213,117,177,137,229,247,158,219,120,69,123,141,118,118,158,124,88,81,83,80,86,74,70,70,	0,1023,1361,1776,2369,3171,4325,5824,6103,6404,7922,13544,14823,15319,15532,15959,16630,18340,19475,20201,21410,26341,33038,66978,77456,
#Partially deleted in new
chr11	72002863	72080687	chr11:72002863-72080687	3	-	72003526	72035943	0	27	675,213,117,177,137,229,247,158,219,120,69,42,3366,123,141,118,118,158,124,88,81,83,80,86,74,70,230,	0,1023,1361,1776,2369,3171,4325,5824,6103,6404,7922,9537,10031,13544,14823,15319,15532,15959,16630,18340,19475,20201,21410,26341,33038,66978,77594,
#Deleted in new
chr11	72002863	72007916	chr11:72002863-72007916	0	-	72002863	72002863	8553170	7	675,213,117,177,137,229,728,	0,1023,1361,1776,2369,3171,4325,
#Partially deleted in new
chr11	72002863	72014036	chr11:72002863-72014036	0	-	72003526	72014036	789624	13	675,213,117,177,137,229,247,54,158,219,120,69,1142,	0,1023,1361,1776,2369,3171,4325,5228,5824,6103,6404,7922,10031,
#Partially deleted in new
chr11	72002864	72080693	chr11:72002864-72080693	1	-	72003526	72035943	0	25	674,213,117,177,137,229,247,158,219,120,69,123,141,118,118,158,124,88,81,83,80,86,74,70,236,	0,1022,1360,1775,2368,3170,4324,5823,6102,6403,7921,13543,14822,15318,15531,15958,16629,18339,19474,20200,21409,26340,33037,66977,77593,
#Partially deleted in new
chr11	72002864	72035987	chr11:72002864-72035987	1	-	72003526	72035943	0	24	674,213,117,177,137,229,247,158,219,120,69,3366,123,141,118,118,158,124,88,81,83,80,86,86,	0,1022,1360,1775,2368,3170,4324,5823,6102,6403,7921,10030,13543,14822,15318,15531,15958,16629,18339,19474,20200,21409,26340,33037,
#Partially deleted in new
chr11	72002872	72035987	chr11:72002872-72035987	1	-	72003526	72035943	789624	26	666,213,117,177,137,229,247,158,219,120,69,705,96,2559,123,141,118,118,158,124,88,81,83,80,86,86,	0,1014,1352,1767,2360,3162,4316,5815,6094,6395,7913,10022,10732,10829,13535,14814,15310,15523,15950,16621,18331,19466,20192,21401,26332,33029,
#Deleted in new
chr11	72005242	72008028	chr11:72005242-72008028	0	-	72005242	72005242	8553170	4	127,229,247,103,	0,792,1946,2683,
#Partially deleted in new
chr11	72005285	72013312	chr11:72005285-72013312	0	-	72008611	72013312	789624	7	84,229,1657,219,120,69,418,	0,749,1903,3681,3982,5500,7609,
#Deleted in new
chr11	72008437	72009150	chr11:72008437-72009150	0	-	72008437	72008437	8553170	2	408,184,	0,529,
#Deleted in new
chr11	72012258	72012926	chr11:72012258-72012926	0	-	72012258	72012258	8553170	2	184,32,	0,636,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	72014290	72020910	chr11:72014290-72020910	3	+	72014290	72014290	789624	4	2597,936,115,585,	0,3068,4604,6035,
#Partially deleted in new
chr11	72014947	72041137	chr11:72014947-72041137	0	-	72014947	72035943	789624	14	1313,123,141,118,118,158,124,88,81,83,80,86,74,179,	0,1460,2739,3235,3448,3875,4546,6256,7391,8117,9326,14257,20954,26011,
#Partially deleted in new
chr11	72015428	72080474	chr11:72015428-72080474	0	-	72015428	72035943	789624	15	832,123,141,118,118,158,124,88,81,83,80,86,74,70,155,	0,979,2258,2754,2967,3394,4065,5775,6910,7636,8845,13776,20473,54413,64891,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	72016975	72070063	chr11:72016975-72070063	0	-	72016975	72016975	8553170	13	852,118,118,158,124,88,81,83,80,86,74,127,222,	0,1207,1420,1847,2518,4228,5363,6089,7298,12229,18926,51129,52866,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	72016975	72080494	chr11:72016975-72080494	0	-	72016975	72016975	8553170	13	852,118,118,158,124,88,81,83,80,86,74,70,37,	0,1207,1420,1847,2518,4228,5363,6089,7298,12229,18926,52866,63482,
#Partially deleted in new
chr11	72017279	72041086	chr11:72017279-72041086	0	-	72017279	72017279	8553170	12	548,118,118,158,124,88,81,83,80,86,74,128,	0,903,1116,1543,2214,3924,5059,5785,6994,11925,18622,23679,
#Partially deleted in new
chr11	72018902	72041525	chr11:72018902-72041525	0	-	72018902	72035943	789624	9	78,124,88,81,83,80,86,74,98,	0,591,2301,3436,4162,5371,10302,16999,22525,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	72018961	72080542	chr11:72018961-72080542	0	-	72018961	72035943	789624	11	19,124,88,81,83,80,86,74,121,70,85,	0,532,2242,3377,4103,5312,10243,16940,30457,50880,61496,
#Partially deleted in new
chr11	72019555	72042142	chr11:72019555-72042142	0	-	72019555	72035943	789624	8	62,88,81,83,80,86,74,320,	0,1648,2783,3509,4718,9649,16346,22267,
#Partially deleted in new
chr11	72019598	72041792	chr11:72019598-72041792	0	-	72019598	72035943	789624	8	19,88,81,83,80,86,74,71,	0,1605,2740,3466,4675,9606,16303,22123,
#Partially deleted in new
chr11	72019600	72039825	chr11:72019600-72039825	0	-	72019600	72035943	789624	8	17,88,81,83,80,86,74,91,	0,1603,2738,3464,4673,9604,16301,20134,
#Partially deleted in new
chr11	72021225	72040710	chr11:72021225-72040710	0	-	72021225	72035943	789624	7	66,81,83,80,86,74,106,	0,1113,1839,3048,7979,14676,19379,
#Deleted in new
chr11	72022201	72024850	chr11:72022201-72024850	0	-	72022201	72022201	8553170	3	218,83,577,	0,863,2072,
#Partially deleted in new
chr11	72022382	72070087	chr11:72022382-72070087	0	-	72022382	72035943	789624	6	37,83,80,86,74,246,	0,682,1891,6822,13519,47459,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	72023081	72080542	chr11:72023081-72080542	0	-	72023081	72035943	789624	7	66,80,86,74,122,70,85,	0,1192,6123,12820,45414,46760,57376,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	72023107	72080431	chr11:72023107-72080431	0	-	72023107	72035943	789624	7	40,80,86,74,121,70,112,	0,1166,6097,12794,26311,46734,57212,
#Partially deleted in new
chr11	72023137	72080554	chr11:72023137-72080554	0	-	72023137	72035943	789624	7	10,80,86,74,172,70,97,	0,1136,6067,12764,27524,46704,57320,
#Partially deleted in new
chr11	72024070	72080542	chr11:72024070-72080542	0	-	72024070	72024070	8553170	5	283,86,74,70,85,	0,5134,11831,45771,56387,
#Partially deleted in new
chr11	72024298	72080463	chr11:72024298-72080463	0	-	72024298	72035943	789624	6	55,86,74,153,70,144,	0,4906,11603,43780,45543,56021,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	72024304	72070093	chr11:72024304-72070093	0	-	72024304	72035943	789624	5	49,86,74,121,252,	0,4900,11597,25114,45537,
#Partially deleted in new
chr11	72024312	72080536	chr11:72024312-72080536	0	-	72024312	72035943	789624	4	41,86,74,79,	0,4892,11589,56145,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	72047872	72047951	chr11:72047872-72047951	3	-	72047872	72047872	8553170	1	79,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	72065198	72080693	chr11:72065198-72080693	0	-	72065198	72065198	8553170	3	3033,70,236,	0,4643,15259,
#Deleted in new
chr11	72072227	72072302	chr11:72072227-72072302	3	-	72072227	72072227	5263520	1	75,	0,
#Partially deleted in new
chr11	72080330	72110777	chr11:72080330-72110777	1	+	72095062	72108925	789624	7	555,206,149,49,275,197,2173,	0,13165,14617,24633,25605,27592,28274,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	72080336	72096895	chr11:72080336-72096895	3	+	72089083	72095520	789624	6	549,84,137,206,149,1517,	0,7960,8692,13159,14611,15042,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	72080336	72095956	chr11:72080336-72095956	1	+	72089083	72095520	789624	5	549,137,206,149,578,	0,8692,13159,14611,15042,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	72080336	72096833	chr11:72080336-72096833	1	+	72089083	72095520	789624	6	426,84,137,206,149,1455,	0,7960,8692,13159,14611,15042,
#Partially deleted in new
chr11	72080565	72089567	chr11:72080565-72089567	0	+	72080565	72080565	8553170	4	320,84,137,154,	0,7731,8463,8848,
#Partially deleted in new
chr11	72080580	72095594	chr11:72080580-72095594	0	+	72089083	72089451	789624	7	182,84,137,180,206,149,216,	0,7716,8448,8836,12915,14367,14798,
#Partially deleted in new
chr11	72080594	72095595	chr11:72080594-72095595	1	+	72089083	72095520	789624	7	291,163,84,137,206,149,217,	0,4816,7702,8434,12901,14353,14784,
#Partially deleted in new
chr11	72080604	72095593	chr11:72080604-72095593	1	+	72095073	72095520	789624	4	158,206,149,215,	0,12891,14343,14774,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	72080665	72096852	chr11:72080665-72096852	1	+	72095073	72095520	789624	4	220,206,149,1474,	0,12830,14282,14713,
#Partially deleted in new
chr11	72080776	72095180	chr11:72080776-72095180	0	+	72080776	72080776	8553170	3	109,206,233,	0,12719,14171,
#Partially deleted in new
chr11	72080776	72108027	chr11:72080776-72108027	0	+	72095073	72106133	789624	6	109,206,149,49,155,105,	0,12719,14171,24187,25279,27146,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	72080811	72096135	chr11:72080811-72096135	1	+	72088352	72095520	789624	5	74,84,206,149,757,	0,7485,12684,14136,14567,
#Partially deleted in new
chr11	72080825	72095597	chr11:72080825-72095597	1	+	72095073	72095520	789624	3	60,149,219,	0,14122,14553,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	72080835	72095692	chr11:72080835-72095692	1	+	72089083	72095100	789624	5	50,41,137,206,745,	0,7504,8193,12660,14112,
#Partially deleted in new
chr11	72080844	72095618	chr11:72080844-72095618	1	+	72089083	72095520	789624	6	41,41,137,206,149,240,	0,7495,8184,12651,14103,14534,
#Partially deleted in new
chr11	72080844	72109032	chr11:72080844-72109032	3	+	72089083	72108638	789624	6	41,41,137,206,149,428,	0,7495,8184,12651,14103,27760,
#Partially deleted in new
chr11	72080852	72095612	chr11:72080852-72095612	0	+	72089083	72089451	789624	7	33,41,137,180,206,149,234,	0,7487,8176,8564,12643,14095,14526,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	72080858	72096895	chr11:72080858-72096895	1	+	72089083	72095100	789624	5	27,84,137,206,1948,	0,7438,8170,12637,14089,
#Partially deleted in new
chr11	72080858	72110779	chr11:72080858-72110779	0	+	72089083	72106133	8553170	9	27,84,137,206,149,49,275,197,2175,	0,7438,8170,12637,14089,24105,25077,27064,27746,
#Partially deleted in new
chr11	72080858	72108802	chr11:72080858-72108802	1	+	72089083	72108638	789624	6	27,84,137,206,149,198,	0,7438,8170,12637,14089,27746,
#Partially deleted in new
chr11	72080858	72110782	chr11:72080858-72110782	0	+	72089083	72106133	8553170	9	27,84,137,206,149,49,155,197,2178,	0,7438,8170,12637,14089,24105,25197,27064,27746,
#Partially deleted in new
chr11	72080860	72095565	chr11:72080860-72095565	0	+	72089083	72089451	789624	7	25,84,137,180,206,149,187,	0,7436,8168,8556,12635,14087,14518,
#Partially deleted in new
chr11	72083771	72094970	chr11:72083771-72094970	0	+	72089083	72094970	789624	5	77,84,137,206,23,	0,4525,5257,9724,11176,
#Partially deleted in new
chr11	72085894	72103246	chr11:72085894-72103246	1	-	72086408	72103224	789624	5	550,127,78,146,64,	0,12394,12886,13216,17288,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	72088319	72096895	chr11:72088319-72096895	1	+	72089083	72096762	789624	5	61,137,206,149,173,	0,709,5176,6628,8403,
#Deleted in new
chr11	72088323	72089279	chr11:72088323-72089279	0	+	72089083	72089279	789624	2	57,251,	0,705,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	72088352	72096890	chr11:72088352-72096890	1	+	72088352	72095520	789624	4	28,206,149,1512,	0,5143,6595,7026,
#Partially deleted in new
chr11	72088663	72095599	chr11:72088663-72095599	0	+	72088663	72088663	8553170	5	80,137,206,149,221,	0,365,4832,6284,6715,
#Partially deleted in new
chr11	72089025	72110782	chr11:72089025-72110782	1	+	72095062	72108925	789624	7	140,206,149,49,275,197,2178,	0,4470,5922,15938,16910,18897,19579,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	72089025	72096890	chr11:72089025-72096890	1	+	72089083	72095520	789624	4	140,206,149,1512,	0,4470,5922,6353,
#Partially deleted in new
chr11	72094437	72103237	chr11:72094437-72103237	1	-	72094743	72103224	789624	4	340,78,146,55,	0,4343,4673,8745,
#Partially deleted in new
chr11	72097291	72103387	chr11:72097291-72103387	3	-	72097821	72103224	0	5	623,127,78,146,205,	0,997,1489,1819,5891,
#Deleted in new
chr11	72097291	72099258	chr11:72097291-72099258	0	-	72097901	72099258	789624	3	623,78,148,	0,1489,1819,
#Partially deleted in new
chr11	72097347	72103236	chr11:72097347-72103236	1	-	72098198	72103224	789624	4	1068,78,146,54,	0,1433,1763,5835,
#Partially deleted in new
chr11	72097426	72103297	chr11:72097426-72103297	0	-	72098395	72103224	789624	5	488,127,78,128,78,	0,862,1354,1684,5793,
#Partially deleted in new
chr11	72097819	72100725	chr11:72097819-72100725	0	-	72097819	72097819	8553170	5	95,127,78,146,89,	0,469,961,1291,2817,
#Partially deleted in new
chr11	72098536	72103280	chr11:72098536-72103280	0	-	72098536	72098536	8553170	3	322,146,98,	0,574,4646,
#Partially deleted in new
chr11	72105923	72109329	chr11:72105923-72109329	3	+	72105951	72108925	789624	3	287,197,725,	0,1999,2681,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	72106377	72112704	chr11:72106377-72112704	1	-	72107350	72110150	789624	4	1228,138,60,55,	0,3710,4166,6272,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	72107158	72111443	chr11:72107158-72111443	1	-	72107350	72111276	789624	5	447,138,60,130,32,	0,2929,3385,3998,4253,
#Deleted in new
chr11	72109586	72110245	chr11:72109586-72110245	0	-	72109586	72109586	8553170	2	342,158,	0,501,
#Partially deleted in new
chr11	72109589	72112686	chr11:72109589-72112686	1	-	72109880	72111276	0	5	339,138,60,130,37,	0,498,954,1567,3060,
#Partially deleted in new
chr11	72114868	72139628	chr11:72114868-72139628	0	+	72135952	72139628	789624	6	57,151,174,189,136,42,	0,166,21078,24092,24478,24718,
#Partially deleted in new
chr11	72131281	72131907	chr11:72131281-72131907	7	+	72131281	72131281	16724991	1	626,	0,
#Partially deleted in new
chr11	72135709	72139892	chr11:72135709-72139892	0	+	72135952	72139380	789624	5	59,174,317,136,306,	0,237,3123,3637,3877,
#Partially deleted in new
chr11	72135751	72139890	chr11:72135751-72139890	3	+	72135952	72139831	789624	5	17,174,189,136,304,	0,195,3209,3595,3835,
#Partially deleted in new
chr11	72135847	72139022	chr11:72135847-72139022	0	+	72135958	72139022	789624	2	273,62,	0,3113,
#Partially deleted in new
chr11	72135942	72139890	chr11:72135942-72139890	1	+	72135958	72139115	789624	5	178,150,37,136,304,	0,3018,3170,3404,3644,
#Deleted in new
chr11	72139249	72139717	chr11:72139249-72139717	0	+	72139249	72139249	8553170	2	233,131,	0,337,
#Deleted in new
chr11	72158821	72159734	chr11:72158821-72159734	7	+	72158821	72158821	16724991	3	202,133,274,	0,355,639,
#Partially deleted in new
chr11	72172454	72177954	chr11:72172454-72177954	7	+	72172454	72172454	16724991	4	160,193,133,232,	0,4309,5029,5268,
#Partially deleted in new
chr11	72189557	72196323	chr11:72189557-72196323	3	+	72192173	72196177	0	5	202,176,189,136,427,	0,2608,5713,6054,6339,
#Partially deleted in new
chr11	72189667	72196298	chr11:72189667-72196298	1	+	72192173	72196177	0	6	92,66,176,189,136,402,	0,908,2498,5603,5944,6229,
#Partially deleted in new
chr11	72190213	72196298	chr11:72190213-72196298	1	+	72192173	72196177	0	5	428,176,189,136,402,	0,1952,5057,5398,5683,
#Partially deleted in new
chr11	72192075	72196301	chr11:72192075-72196301	1	+	72192173	72196177	0	4	266,189,136,405,	0,3195,3536,3821,
#Partially deleted in new
chr11	72216600	72221950	chr11:72216600-72221950	1	+	72216898	72221762	789624	5	325,174,189,136,418,	0,1960,4269,4575,4932,
#Partially deleted in new
chr11	72216762	72221945	chr11:72216762-72221945	3	+	72218584	72221762	0	5	163,174,189,136,476,	0,1798,4107,4413,4707,
#Partially deleted in new
chr11	72216774	72221949	chr11:72216774-72221949	1	+	72216898	72221682	789624	8	151,174,120,42,25,2,132,480,	0,1786,4095,4216,4259,4400,4405,4695,
#Partially deleted in new
chr11	72216780	72221950	chr11:72216780-72221950	1	+	72216898	72221762	789624	4	145,189,136,481,	0,4089,4395,4689,
#Partially deleted in new
chr11	72216793	72221503	chr11:72216793-72221503	0	+	72216898	72221503	789624	5	126,162,189,136,34,	0,1779,4076,4382,4676,
#Partially deleted in new
chr11	72216793	72221027	chr11:72216793-72221027	0	+	72216898	72221027	789624	4	132,87,174,158,	0,543,1767,4076,
#Partially deleted in new
chr11	72216795	72221543	chr11:72216795-72221543	0	+	72216898	72221543	789624	5	124,174,189,136,74,	0,1765,4074,4380,4674,
#Partially deleted in new
chr11	72216825	72221509	chr11:72216825-72221509	0	+	72218584	72221509	789624	5	71,174,189,136,40,	0,1735,4044,4350,4644,
#Partially deleted in new
chr11	72216830	72221586	chr11:72216830-72221586	0	+	72216898	72221586	789624	5	95,162,189,136,117,	0,1742,4039,4345,4639,
#Partially deleted in new
chr11	72218537	72221566	chr11:72218537-72221566	0	+	72218584	72221566	789624	4	197,189,136,34,	0,2332,2638,2995,
#Partially deleted in new
chr11	72223700	72225051	chr11:72223700-72225051	0	+	72224984	72225051	789624	2	103,272,	0,1079,
#Partially deleted in new
chr11	72223943	72225037	chr11:72223943-72225037	0	+	72224984	72225037	789624	2	17,258,	0,836,
#Partially deleted in new
chr11	72224780	72239105	chr11:72224780-72239105	3	+	72224984	72238353	0	28	386,64,151,121,141,94,90,96,151,107,103,197,118,97,139,100,89,82,90,114,89,88,156,79,141,673,134,843,	0,3409,3567,3946,4309,4684,4882,5143,5340,5581,6015,6212,6717,7459,7845,8094,8294,8660,8874,9500,9746,10335,10515,10894,11065,12343,13261,13482,
#Partially deleted in new
chr11	72225068	72228715	chr11:72225068-72228715	0	+	72225068	72225068	8553170	3	98,64,368,	0,3121,3279,
#Partially deleted in new
chr11	72227880	72239105	chr11:72227880-72239105	1	+	72229531	72238353	0	27	373,151,121,141,94,90,96,151,107,103,197,118,97,139,100,89,82,90,114,89,88,156,79,141,673,134,843,	0,467,846,1209,1584,1782,2043,2240,2481,2915,3112,3617,4359,4745,4994,5194,5560,5774,6400,6646,7235,7415,7794,7965,9243,10161,10382,
#Partially deleted in new
chr11	72227880	72239105	chr11:72227880-72239105	1	+	72228200	72238130	789624	30	373,103,45,60,59,141,94,90,96,151,107,103,197,118,97,139,100,89,82,90,114,89,88,156,79,141,583,88,134,843,	0,467,573,846,908,1209,1584,1782,2043,2240,2481,2915,3112,3617,4359,4745,4994,5194,5560,5774,6400,6646,7235,7415,7794,7965,9243,9828,10161,10382,
#Deleted in new
chr11	72228467	72230468	chr11:72228467-72230468	0	+	72229531	72230468	789624	7	31,121,141,94,96,151,107,	0,259,622,997,1456,1653,1894,
#Deleted in new
chr11	72228848	72229736	chr11:72228848-72229736	0	+	72229531	72229736	789624	3	382,94,74,	0,616,814,
#Deleted in new
chr11	72230717	72231316	chr11:72230717-72231316	0	+	72230717	72230717	8553170	2	181,324,	0,275,
#Deleted in new
chr11	72231141	72232608	chr11:72231141-72232608	0	+	72231141	72231141	8553170	3	48,118,369,	0,356,1098,
#Deleted in new
chr11	72231249	72232420	chr11:72231249-72232420	0	+	72231249	72231249	8553170	2	366,181,	0,990,
#Deleted in new
chr11	72232307	72235424	chr11:72232307-72235424	0	+	72232307	72232307	8553170	9	457,100,89,82,90,114,89,88,129,	0,567,767,1133,1347,1973,2219,2808,2988,
#Deleted in new
chr11	72232870	72235946	chr11:72232870-72235946	0	+	72232870	72232870	8553170	9	104,89,304,114,89,88,156,79,101,	0,204,570,1410,1656,2245,2425,2804,2975,
#Partially deleted in new
chr11	72233679	72239105	chr11:72233679-72239105	0	+	72233679	72234340	789624	4	65,114,89,85,	0,601,847,5341,
#Deleted in new
chr11	72237205	72238527	chr11:72237205-72238527	0	+	72237205	72238265	789624	2	591,265,	0,1057,
#Deleted in new
chr11	72237659	72238621	chr11:72237659-72238621	0	+	72237659	72238353	789624	2	137,580,	0,382,
#Partially deleted in new
chr11	72239076	72244176	chr11:72239076-72244176	3	-	72239748	72244004	789624	3	1122,188,389,	0,2025,4711,
#Deleted in new
chr11	72239076	72241192	chr11:72239076-72241192	0	-	72239748	72241192	789624	2	843,85,	0,2031,
#Partially deleted in new
chr11	72239866	72245664	chr11:72239866-72245664	0	-	72239866	72239866	8553170	3	332,188,85,	0,1235,5713,
#Deleted in new
chr11	72249855	72251288	chr11:72249855-72251288	7	-	72249855	72249855	16724991	1	1433,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	72261730	72290688	chr11:72261730-72290688	3	+	72261730	72261730	8553170	2	43,835,	0,28123,
#Partially deleted in new
chr11	72280150	72281178	chr11:72280150-72281178	7	+	72280150	72280150	16724991	2	253,459,	0,569,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr11	72285494	72434648	chr11:72285494-72434648	3	-	72293366	72434474	789624	17	8121,105,120,74,157,162,45,56,78,115,98,129,90,104,87,52,577,	0,8527,8830,9125,9997,16308,16809,21704,23032,31611,44212,73385,87430,94786,117471,144817,148577,
#Partially deleted in new
chr11	72292424	72434680	chr11:72292424-72434680	1	-	72293366	72434232	789624	18	1191,105,120,74,157,162,45,56,78,115,98,129,90,104,87,107,52,609,	0,1597,1900,2195,3067,9378,9879,14774,16102,24681,37282,66455,80500,87856,110541,115673,137887,141647,
#Partially deleted in new
chr11	72292445	72434597	chr11:72292445-72434597	1	-	72293366	72434474	789624	16	1170,105,120,74,157,162,45,56,78,115,98,129,104,87,52,526,	0,1576,1879,2174,3046,9357,9858,14753,16081,24660,37261,66434,87835,110520,137866,141626,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	72293296	72332954	chr11:72293296-72332954	0	-	72293296	72293296	8553170	12	319,105,120,74,157,162,45,56,78,115,98,193,	0,725,1028,1323,2195,8506,9007,13902,15230,23809,36410,39465,
#Partially deleted in new
chr11	72293299	72380326	chr11:72293299-72380326	0	-	72311013	72380326	789624	14	316,105,120,74,157,162,45,56,78,108,115,98,129,46,	0,722,1025,1320,2192,8503,9004,13899,15227,17644,23806,36407,65580,86981,
#Partially deleted in new
chr11	72293302	72434534	chr11:72293302-72434534	1	-	72293366	72434474	789624	15	313,105,120,74,157,162,45,56,78,115,98,129,104,52,463,	0,719,1022,1317,2189,8500,9001,13896,15224,23803,36404,65577,86978,137009,140769,
#Partially deleted in new
chr11	72293302	72434382	chr11:72293302-72434382	0	-	72293366	72434382	789624	18	313,105,120,74,157,162,45,56,78,115,98,129,90,104,87,107,52,311,	0,719,1022,1317,2189,8500,9001,13896,15224,23803,36404,65577,79622,86978,109663,114795,137009,140769,
#Partially deleted in new
chr11	72293302	72434607	chr11:72293302-72434607	1	-	72293366	72434474	789624	16	313,105,120,74,157,162,56,78,115,98,129,90,104,87,52,536,	0,719,1022,1317,2189,8500,13896,15224,23803,36404,65577,79622,86978,109663,137009,140769,
#Partially deleted in new
chr11	72293308	72434640	chr11:72293308-72434640	0	-	72380351	72434474	789624	15	307,105,120,74,157,162,45,56,78,115,98,129,104,73,510,	0,713,1016,1311,2183,8494,8995,13890,15218,23797,36398,65571,86972,109657,140822,
#Partially deleted in new
chr11	72293309	72308584	chr11:72293309-72308584	0	-	72301920	72308584	789624	9	306,105,120,74,157,162,70,56,58,	0,712,1015,1310,2182,8493,8994,13889,15217,
#Partially deleted in new
chr11	72293309	72304197	chr11:72293309-72304197	0	-	72293309	72293309	8553170	8	306,105,120,74,157,162,45,300,	0,712,1015,1310,2182,8493,8994,10588,
#Partially deleted in new
chr11	72294345	72430421	chr11:72294345-72430421	0	-	72294345	72402994	789624	14	99,74,157,162,45,56,78,115,98,129,104,87,107,110,	0,274,1146,7457,7958,12853,14181,22760,35361,64534,85935,108620,113752,135966,
#Partially deleted in new
chr11	72294620	72359206	chr11:72294620-72359206	0	-	72294620	72294620	8553170	10	73,157,162,45,56,78,115,98,129,69,	0,871,7182,7683,12578,13906,22485,35086,64259,64517,
#Deleted in new
chr11	72302138	72302965	chr11:72302138-72302965	3	+	72302138	72302138	8553170	2	224,354,	0,473,
#Partially deleted in new
chr11	72302307	72352566	chr11:72302307-72352566	0	-	72302307	72302307	8553170	6	41,56,78,115,98,119,	0,4891,6219,14798,27399,50140,
#Partially deleted in new
chr11	72317197	72430494	chr11:72317197-72430494	0	-	72317197	72430328	789624	6	23,98,129,104,87,183,	0,12509,41682,63083,85768,113114,
#Partially deleted in new
chr11	72329784	72430445	chr11:72329784-72430445	0	-	72329784	72430328	789624	6	20,129,90,104,87,134,	0,29095,43140,50496,73181,100527,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	72336614	72434629	chr11:72336614-72434629	1	-	72337089	72434474	789624	8	512,82,129,90,104,87,52,558,	0,17693,22265,36310,43666,66351,93697,97457,
#Partially deleted in new
chr11	72351346	72353210	chr11:72351346-72353210	3	+	72351346	72351346	8553170	2	121,439,	0,1425,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	72354266	72434613	chr11:72354266-72434613	0	-	72354266	72354266	8553170	7	123,129,90,104,87,52,230,	0,4613,18658,26014,48699,76045,80117,
#Partially deleted in new
chr11	72354515	72363555	chr11:72354515-72363555	3	+	72354515	72354515	8553170	3	179,198,173,	0,635,8867,
#Partially deleted in new
chr11	72356880	72380302	chr11:72356880-72380302	0	-	72358986	72380302	789624	4	238,129,90,22,	0,1999,16044,23400,
#Deleted in new
chr11	72410715	72412079	chr11:72410715-72412079	3	+	72410715	72410715	8553170	2	160,332,	0,1032,
#Partially deleted in new
chr11	72428805	72434330	chr11:72428805-72434330	0	-	72429048	72434330	789624	3	301,52,259,	0,1506,5266,
#Partially deleted in new
chr11	72478220	72479237	chr11:72478220-72479237	7	+	72478220	72478220	16724991	2	18,481,	0,536,
#Partially deleted in new
chr11	72519985	72521733	chr11:72519985-72521733	7	+	72519985	72519985	16724991	2	30,792,	0,956,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	72551048	72551919	chr11:72551048-72551919	7	-	72551048	72551048	16724991	2	409,151,	0,720,
#Deleted in new
chr11	72562043	72562554	chr11:72562043-72562554	7	+	72562043	72562043	16724991	1	511,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	72570659	72573229	chr11:72570659-72573229	3	+	72570659	72570659	789624	2	248,2202,	0,368,
#Partially deleted in new
chr11	72576140	72674453	chr11:72576140-72674453	3	-	72577383	72674207	0	31	1454,107,39,113,100,75,48,88,123,71,123,78,113,178,73,64,40,112,131,66,42,75,53,154,60,56,110,89,90,73,317,	0,2092,2335,2756,3143,3393,4436,4745,5216,5736,6303,7297,8060,8410,8731,9230,9413,9929,12643,13034,13610,13766,14051,14286,15156,20452,21369,28997,32521,66113,97996,
#Partially deleted in new
chr11	72576141	72642431	chr11:72576141-72642431	1	-	72577383	72642376	0	21	1453,107,39,113,100,75,48,88,123,71,123,78,113,178,73,64,40,112,89,90,178,	0,2091,2334,2755,3142,3392,4435,4744,5215,5735,6302,7296,8059,8409,8730,9229,9412,9928,28996,32520,66112,
#Partially deleted in new
chr11	72576141	72642460	chr11:72576141-72642460	1	-	72577383	72642272	0	31	1453,107,39,113,100,75,48,88,123,71,123,78,113,178,73,64,40,112,131,66,42,75,53,154,60,56,110,89,90,62,207,	0,2091,2334,2755,3142,3392,4435,4744,5215,5735,6302,7296,8059,8409,8730,9229,9412,9928,12642,13033,13609,13765,14050,14285,15155,20451,21368,28996,32520,54936,66112,
#Partially deleted in new
chr11	72576141	72642443	chr11:72576141-72642443	0	-	72608738	72642376	789624	27	732,75,48,88,123,71,123,78,113,178,73,64,40,112,131,66,42,75,53,154,60,56,110,89,90,62,190,	0,3392,4435,4744,5215,5735,6302,7296,8059,8409,8730,9229,9412,9928,12642,13033,13609,13765,14050,14285,15155,20451,21368,28996,32520,54936,66112,
#Partially deleted in new
chr11	72577153	72642460	chr11:72577153-72642460	1	-	72577383	72642376	0	30	441,107,39,113,100,75,48,88,123,71,123,78,113,178,73,64,40,112,131,66,42,75,53,154,60,56,110,89,90,207,	0,1079,1322,1743,2130,2380,3423,3732,4203,4723,5290,6284,7047,7397,7718,8217,8400,8916,11630,12021,12597,12753,13038,13273,14143,19439,20356,27984,31508,65100,
#Partially deleted in new
chr11	72577210	72674408	chr11:72577210-72674408	1	-	72577383	72674207	789624	27	384,107,39,113,100,75,48,88,123,71,123,78,113,178,73,64,40,112,131,66,42,75,53,154,60,73,272,	0,1022,1265,1686,2073,2323,3366,3675,4146,4666,5233,6227,6990,7340,7661,8160,8343,8859,11573,11964,12540,12696,12981,13216,14086,65043,96926,
#Partially deleted in new
chr11	72577295	72669064	chr11:72577295-72669064	1	-	72577383	72668341	0	32	299,107,39,113,100,75,48,88,123,71,123,78,113,178,73,64,40,112,131,66,42,75,53,154,60,56,110,89,90,73,129,55,	0,937,1180,1601,1988,2238,3281,3590,4061,4581,5148,6142,6905,7255,7576,8075,8258,8774,11488,11879,12455,12611,12896,13131,14001,19297,20214,27842,31366,64958,91002,91714,
#Partially deleted in new
chr11	72577544	72579505	chr11:72577544-72579505	0	-	72577544	72577544	8553170	5	50,107,39,113,222,	0,688,931,1352,1739,
#Deleted in new
chr11	72578909	72582369	chr11:72578909-72582369	0	-	72578909	72581935	789624	7	100,100,75,48,88,123,493,	0,374,624,1667,1976,2447,2967,
#Deleted in new
chr11	72578960	72579896	chr11:72578960-72579896	0	-	72578960	72578960	8553170	3	49,100,363,	0,323,573,
#Deleted in new
chr11	72579280	72584473	chr11:72579280-72584473	0	-	72579280	72584473	789624	9	103,75,48,88,123,71,123,78,273,	0,253,1296,1605,2076,2596,3163,4157,4920,
#Deleted in new
chr11	72579548	72583563	chr11:72579548-72583563	0	-	72579548	72583458	789624	7	60,48,88,123,71,123,126,	0,1028,1337,1808,2328,2895,3889,
#Deleted in new
chr11	72584550	72590419	chr11:72584550-72590419	0	-	72584550	72590419	789624	10	178,73,64,40,112,131,66,42,75,228,	0,321,820,1003,1519,4233,4624,5200,5356,5641,
#Deleted in new
chr11	72584571	72587979	chr11:72584571-72587979	3	+	72584571	72584571	8553170	2	485,179,	0,3229,
#Deleted in new
chr11	72585425	72590021	chr11:72585425-72590021	0	-	72585425	72590021	789624	7	9,40,112,131,66,42,115,	0,128,644,3358,3749,4325,4481,
#Partially deleted in new
chr11	72590198	72642411	chr11:72590198-72642411	0	-	72591337	72642376	789624	6	46,154,60,89,90,158,	0,228,1098,14939,18463,52055,
#Partially deleted in new
chr11	72590478	72642460	chr11:72590478-72642460	0	-	72596630	72642376	789624	6	102,60,56,110,28,207,	0,818,6114,7031,14720,51775,
#Partially deleted in new
chr11	72590506	72642422	chr11:72590506-72642422	0	-	72608738	72642376	789624	6	74,60,89,90,62,169,	0,790,14631,18155,40571,51747,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	72590932	72596626	chr11:72590932-72596626	0	-	72590932	72590932	8553170	2	424,34,	0,5660,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	72591177	72642426	chr11:72591177-72642426	0	-	72608738	72642376	789624	5	179,89,90,62,173,	0,13960,17484,39900,51076,
#Partially deleted in new
chr11	72591348	72643618	chr11:72591348-72643618	0	-	72591348	72642272	789624	8	8,56,110,89,90,62,73,65,	0,5244,6161,13789,17313,39729,50905,52205,
#Partially deleted in new
chr11	72596623	72636130	chr11:72596623-72636130	0	-	72608738	72636130	789624	6	25,110,89,90,62,151,	0,886,8514,12038,34454,39356,
#Partially deleted in new
chr11	72596628	72674591	chr11:72596628-72674591	0	-	72596628	72596628	8553170	5	20,110,89,90,455,	0,881,8509,12033,77508,
#Partially deleted in new
chr11	72597509	72643131	chr11:72597509-72643131	0	-	72597509	72597509	8553170	7	110,95,89,90,62,73,145,	0,999,7628,11152,33568,44744,45477,
#Partially deleted in new
chr11	72597603	72674422	chr11:72597603-72674422	0	-	72631093	72674207	789624	5	16,89,90,62,286,	0,7534,11058,33474,76533,
#Partially deleted in new
chr11	72605137	72674433	chr11:72605137-72674433	0	-	72605137	72642272	789624	5	89,90,62,73,297,	0,3524,25940,37116,68999,
#Deleted in new
chr11	72615062	72615130	chr11:72615062-72615130	3	-	72615062	72615062	5263520	1	68,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	72621765	72621827	chr11:72621765-72621827	3	+	72621765	72621765	8553170	1	62,	0,
#Partially deleted in new
chr11	72631081	72674450	chr11:72631081-72674450	0	-	72668377	72674207	789624	4	58,73,129,314,	0,11172,37216,43055,
#Partially deleted in new
chr11	72642253	72658121	chr11:72642253-72658121	0	-	72642253	72658055	789624	2	73,271,	0,15597,
#Partially deleted in new
chr11	72643236	72659407	chr11:72643236-72659407	3	+	72643236	72643236	8553170	4	282,89,142,49,	0,6013,14832,16122,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr11	72685068	72793599	chr11:72685068-72793599	1	-	72685663	72727128	0	34	613,150,64,51,83,146,114,118,69,87,148,106,213,164,52,196,103,136,135,175,183,86,200,107,203,121,70,144,131,68,170,553,83,725,	0,973,2370,2619,3386,8256,8623,9911,10318,10473,10649,11480,11914,12254,12529,12842,13936,14348,16580,17836,19083,20736,22106,24801,25316,25952,26361,27127,27369,28107,29083,41551,47446,107806,
#Partially deleted in new
chr11	72685068	72700366	chr11:72685068-72700366	0	-	72685068	72685068	8553170	20	613,150,64,51,83,146,114,118,69,87,148,106,213,164,52,196,103,136,62,83,	0,973,2370,2619,3386,8256,8623,9911,10318,10473,10649,11480,11914,12254,12529,12842,13936,14348,14949,15215,
#Partially deleted in new
chr11	72685069	72700088	chr11:72685069-72700088	1	-	72685663	72700039	789624	19	612,150,64,51,83,146,114,118,69,87,148,106,213,164,52,196,103,136,71,	0,972,2369,2618,3385,8255,8622,9910,10317,10472,10648,11479,11913,12253,12528,12841,13935,14347,14948,
#Partially deleted in new
chr11	72685069	72722088	chr11:72685069-72722088	0	-	72685069	72685069	8553170	31	612,150,64,51,83,33,146,114,118,69,87,148,647,164,52,196,103,136,135,175,183,86,200,107,203,121,70,144,806,170,239,	0,972,2369,2618,3385,7683,8255,8622,9910,10317,10472,10648,11479,12253,12528,12841,13935,14347,16579,17835,19082,20735,22105,24800,25315,25951,26360,27126,27368,29082,36780,
#Partially deleted in new
chr11	72685074	72722358	chr11:72685074-72722358	3	-	72685663	72713187	0	33	607,150,64,51,83,33,146,114,118,69,87,148,106,213,164,52,196,103,136,135,175,183,86,200,107,203,121,70,144,131,68,170,509,	0,967,2364,2613,3380,7678,8250,8617,9905,10312,10467,10643,11474,11908,12248,12523,12836,13930,14342,16574,17830,19077,20730,22100,24795,25310,25946,26355,27121,27363,28101,29077,36775,
#Partially deleted in new
chr11	72685074	72713151	chr11:72685074-72713151	1	-	72685663	72712595	0	30	607,150,64,51,83,33,146,114,118,69,87,148,106,213,164,52,196,103,136,135,175,183,86,200,107,203,121,70,144,714,	0,967,2364,2613,3380,7678,8250,8617,9905,10312,10467,10643,11474,11908,12248,12523,12836,13930,14342,16574,17830,19077,20730,22100,24795,25310,25946,26355,27121,27363,
#Partially deleted in new
chr11	72685074	72752403	chr11:72685074-72752403	1	-	72685663	72727128	0	35	607,150,64,51,83,33,146,114,118,69,87,148,106,213,164,52,196,103,136,135,175,183,86,200,107,203,121,70,144,131,68,170,553,83,76,	0,967,2364,2613,3380,7678,8250,8617,9905,10312,10467,10643,11474,11908,12248,12523,12836,13930,14342,16574,17830,19077,20730,22100,24795,25310,25946,26355,27121,27363,28101,29077,41545,47440,67253,
#Partially deleted in new
chr11	72685074	72693808	chr11:72685074-72693808	3	+	72685074	72685074	8553170	2	347,41,	0,8693,
#Partially deleted in new
chr11	72685587	72722028	chr11:72685587-72722028	1	-	72685663	72713187	789624	32	94,150,64,51,83,146,114,118,69,87,148,106,213,164,52,196,103,136,135,175,183,86,200,107,203,121,70,144,131,68,170,179,	0,454,1851,2100,2867,7737,8104,9392,9799,9954,10130,10961,11395,11735,12010,12323,13417,13829,16061,17317,18564,20217,21587,24282,24797,25433,25842,26608,26850,27588,28564,36262,
#Partially deleted in new
chr11	72685587	72722028	chr11:72685587-72722028	1	-	72685663	72713187	0	31	94,150,64,51,83,146,114,118,69,87,148,106,213,164,52,196,103,136,135,175,86,200,107,203,121,70,144,131,68,170,179,	0,454,1851,2100,2867,7737,8104,9392,9799,9954,10130,10961,11395,11735,12010,12323,13417,13829,16061,17317,20217,21587,24282,24797,25433,25842,26608,26850,27588,28564,36262,
#Partially deleted in new
chr11	72685607	72688888	chr11:72685607-72688888	0	-	72685607	72685607	8553170	5	74,150,64,51,434,	0,434,1831,2080,2847,
#Partially deleted in new
chr11	72685643	72695085	chr11:72685643-72695085	0	-	72685643	72695085	789624	8	38,97,64,51,83,146,114,106,	0,451,1795,2044,2811,7681,8048,9336,
#Partially deleted in new
chr11	72685694	72688481	chr11:72685694-72688481	0	-	72685798	72688481	789624	4	497,64,51,27,	0,1744,1993,2760,
#Partially deleted in new
chr11	72686041	72688537	chr11:72686041-72688537	0	-	72686041	72686041	8553170	3	150,300,83,	0,1397,2413,
#Partially deleted in new
chr11	72687259	72689546	chr11:72687259-72689546	0	-	72687259	72687259	8553170	4	243,51,83,51,	0,428,1195,2236,
#Partially deleted in new
chr11	72693107	72695076	chr11:72693107-72695076	0	-	72693107	72693107	8553170	4	116,146,114,97,	0,217,584,1872,
#Partially deleted in new
chr11	72693138	72695040	chr11:72693138-72695040	0	-	72693138	72693138	8553170	3	332,114,61,	0,553,1841,
#Partially deleted in new
chr11	72693676	72695454	chr11:72693676-72695454	0	-	72693676	72693676	8553170	3	129,118,68,	0,1303,1710,
#Partially deleted in new
chr11	72693759	72697021	chr11:72693759-72697021	0	-	72693759	72693759	8553170	6	46,118,69,324,106,39,	0,1220,1627,1782,2789,3223,
#Partially deleted in new
chr11	72697090	72703211	chr11:72697090-72703211	0	-	72697090	72702935	789624	9	105,164,52,196,103,136,135,175,35,	0,232,507,820,1914,2326,4558,5814,6086,
#Partially deleted in new
chr11	72697375	72703411	chr11:72697375-72703411	0	-	72697375	72702935	789624	8	111,52,196,103,136,135,175,86,	0,222,535,1629,2041,4273,5529,5950,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	72700473	72705607	chr11:72700473-72705607	3	+	72700473	72700473	789624	2	80,1744,	0,3390,
#Deleted in new
chr11	72708185	72708565	chr11:72708185-72708565	7	+	72708185	72708185	16724991	1	380,	0,
#Deleted in new
chr11	72709842	72710570	chr11:72709842-72710570	0	-	72709842	72709842	8553170	2	134,137,	0,591,
#Partially deleted in new
chr11	72754728	72759309	chr11:72754728-72759309	0	-	72754728	72759309	789624	6	54,21,53,118,104,76,	0,393,972,3038,3801,4505,
#Partially deleted in new
chr11	72754728	72793657	chr11:72754728-72793657	1	-	72754896	72781181	789624	8	414,53,118,104,148,320,108,248,	0,972,3038,3801,4505,26246,38146,38681,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	72754729	72793681	chr11:72754729-72793681	3	-	72754896	72781181	789624	7	413,53,118,104,148,320,807,	0,971,3037,3800,4504,26245,38145,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	72754838	72793643	chr11:72754838-72793643	1	-	72754896	72781181	789624	7	304,53,118,104,148,182,769,	0,862,2928,3691,4395,26274,38036,
#Partially deleted in new
chr11	72754842	72781116	chr11:72754842-72781116	0	-	72754842	72754842	8553170	5	300,53,104,148,142,	0,858,3687,4391,26132,
#Partially deleted in new
chr11	72754862	72757939	chr11:72754862-72757939	0	-	72754862	72754862	8553170	3	280,53,173,	0,838,2904,
#Partially deleted in new
chr11	72754863	72755947	chr11:72754863-72755947	0	-	72754863	72754863	8553170	2	279,247,	0,837,
#Partially deleted in new
chr11	72754892	72781842	chr11:72754892-72781842	1	-	72754896	72781181	789624	7	250,53,118,104,148,233,179,	0,808,2874,3637,4341,26169,26771,
#Partially deleted in new
chr11	72754984	72759381	chr11:72754984-72759381	0	-	72754984	72759381	789624	5	86,53,118,104,148,	0,716,2782,3545,4249,
#Partially deleted in new
chr11	72755015	72781893	chr11:72755015-72781893	0	-	72755015	72781181	789624	7	127,53,118,104,148,320,230,	0,685,2751,3514,4218,25959,26648,
#Partially deleted in new
chr11	72755061	72759381	chr11:72755061-72759381	0	-	72755061	72759381	789624	4	81,118,104,148,	0,2705,3468,4172,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	72755328	72757882	chr11:72755328-72757882	0	-	72755505	72757882	789624	2	425,116,	0,2438,
#Partially deleted in new
chr11	72757770	72785967	chr11:72757770-72785967	0	-	72757770	72781181	789624	5	114,104,148,320,153,	0,759,1463,23204,28044,
#Partially deleted in new
chr11	72758575	72782359	chr11:72758575-72782359	0	-	72758575	72781181	789624	4	58,148,320,94,	0,658,22399,23690,
#Partially deleted in new
chr11	72759193	72781734	chr11:72759193-72781734	0	-	72759193	72759193	8553170	3	188,320,71,	0,21781,22470,
#Partially deleted in new
chr11	72759255	72785966	chr11:72759255-72785966	0	-	72759255	72781181	789624	3	126,233,152,	0,21806,26559,
#Partially deleted in new
chr11	72759275	72781835	chr11:72759275-72781835	0	-	72759275	72781181	789624	3	106,182,172,	0,21837,22388,
#Partially deleted in new
chr11	72759321	72782529	chr11:72759321-72782529	0	-	72759321	72781181	789624	3	60,320,58,	0,21653,23150,
#Partially deleted in new
chr11	72780132	72793592	chr11:72780132-72793592	0	-	72780132	72781181	789624	5	102,85,320,108,183,	0,233,842,12742,13277,
#Partially deleted in new
chr11	72780665	72793657	chr11:72780665-72793657	0	-	72780665	72780665	8553170	3	629,108,248,	0,12209,12744,
#Partially deleted in new
chr11	72781146	72793657	chr11:72781146-72793657	0	-	72781146	72781181	789624	4	148,54,108,248,	0,9190,11728,12263,
#Deleted in new
chr11	72783529	72783592	chr11:72783529-72783592	3	+	72783529	72783529	5263520	1	63,	0,
#Partially deleted in new
chr11	72793623	72814054	chr11:72793623-72814054	3	-	72793623	72793623	8553170	5	654,162,91,123,269,	0,9975,16817,19009,20162,
#Partially deleted in new
chr11	72814307	72829635	chr11:72814307-72829635	3	+	72814445	72829390	789624	18	256,100,100,74,252,66,114,63,109,106,71,72,121,106,150,48,102,333,	0,2420,3448,7360,7736,8170,8540,9752,10426,10994,11865,12210,12395,12880,14051,14421,14575,14995,
#Partially deleted in new
chr11	72814405	72843674	chr11:72814405-72843674	1	+	72814445	72828755	789624	6	158,100,100,150,48,1058,	0,2322,3350,13953,14323,28211,
#Partially deleted in new
chr11	72814414	72829633	chr11:72814414-72829633	0	+	72814445	72821595	789624	18	149,100,100,194,252,66,114,63,109,106,71,72,121,106,150,48,102,331,	0,2313,3341,7133,7629,8063,8433,9645,10319,10887,11758,12103,12288,12773,13944,14314,14468,14888,
#Partially deleted in new
chr11	72814418	72829635	chr11:72814418-72829635	0	+	72814418	72814418	8553170	16	145,100,100,74,252,66,1995,106,71,72,121,106,150,48,102,333,	0,2309,3337,7249,7625,8059,8429,10883,11754,12099,12284,12769,13940,14310,14464,14884,
#Partially deleted in new
chr11	72814424	72823027	chr11:72814424-72823027	0	+	72814424	72814424	8553170	4	139,100,100,180,	0,2303,3331,8423,
#Partially deleted in new
chr11	72814424	72823686	chr11:72814424-72823686	0	+	72814424	72814424	8553170	4	139,100,100,839,	0,2303,3331,8423,
#Partially deleted in new
chr11	72814426	72829633	chr11:72814426-72829633	0	+	72814445	72821201	789624	17	137,100,100,543,252,1320,63,109,106,71,72,121,106,150,48,102,331,	0,2301,3329,6772,7617,8051,9633,10307,10875,11746,12091,12276,12761,13932,14302,14456,14876,
#Partially deleted in new
chr11	72814431	72819015	chr11:72814431-72819015	0	+	72814431	72817876	789624	3	132,100,1260,	0,2296,3324,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	72815886	72817781	chr11:72815886-72817781	0	+	72815886	72815886	8553170	3	463,100,26,	0,841,1869,
#Partially deleted in new
chr11	72816744	72820338	chr11:72816744-72820338	0	+	72816744	72816744	8553170	3	83,100,202,	0,1011,3392,
#Partially deleted in new
chr11	72821887	72829633	chr11:72821887-72829633	0	+	72821887	72821887	8553170	8	408,2365,106,71,776,418,102,331,	0,590,3414,4285,4630,6471,6995,7415,
#Deleted in new
chr11	72822188	72823495	chr11:72822188-72823495	0	+	72822188	72822188	8553170	3	107,66,648,	0,289,659,
#Deleted in new
chr11	72822233	72825392	chr11:72822233-72825392	0	+	72822233	72824082	789624	7	62,66,114,32,63,109,91,	0,244,614,1532,1826,2500,3068,
#Deleted in new
chr11	72822321	72827272	chr11:72822321-72827272	0	+	72822321	72827272	789624	9	222,114,63,109,106,71,72,121,85,	0,526,1738,2412,2980,3851,4196,4381,4866,
#Partially deleted in new
chr11	72822340	72829595	chr11:72822340-72829595	0	+	72822340	72829390	789624	12	203,114,63,109,106,71,72,121,106,150,48,293,	0,507,1719,2393,2961,3832,4177,4362,4847,6018,6388,6962,
#Partially deleted in new
chr11	72822340	72829612	chr11:72822340-72829612	0	+	72822340	72829390	789624	13	203,114,63,109,106,71,72,121,106,150,48,102,310,	0,507,1719,2393,2961,3832,4177,4362,4847,6018,6388,6542,6962,
#Deleted in new
chr11	72822430	72823286	chr11:72822430-72823286	0	+	72822430	72822430	8553170	2	113,439,	0,417,
#Partially deleted in new
chr11	72822438	72829598	chr11:72822438-72829598	0	+	72822438	72829390	789624	12	105,114,109,106,71,72,121,106,150,48,102,296,	0,409,2295,2863,3734,4079,4264,4749,5920,6290,6444,6864,
#Deleted in new
chr11	72822476	72826243	chr11:72822476-72826243	0	+	72822476	72823586	789624	7	67,114,254,63,109,106,71,	0,371,1067,1583,2257,2825,3696,
#Partially deleted in new
chr11	72822482	72828478	chr11:72822482-72828478	0	+	72822482	72828478	789624	3	61,114,120,	0,365,5876,
#Deleted in new
chr11	72823894	72826734	chr11:72823894-72826734	0	+	72823894	72823894	8553170	6	228,109,59,71,72,32,	0,839,1454,2278,2623,2808,
#Partially deleted in new
chr11	72836744	73142046	chr11:72836744-73142046	1	-	72838790	73015882	0	19	2130,83,130,221,178,84,135,162,105,117,96,123,129,55,134,145,77,46,190,	0,4132,4709,5876,6406,6704,13010,31120,50725,53084,65798,85083,147343,148317,152219,164245,179064,246950,305112,
#Partially deleted in new
chr11	72836745	73142046	chr11:72836745-73142046	1	-	72838790	73141877	789624	21	2129,83,130,221,178,84,135,162,105,117,72,96,123,129,55,134,145,77,46,98,190,	0,4131,4708,5875,6405,6703,13009,31119,50724,53083,63511,65797,85082,147342,148316,152218,164244,179063,246949,303285,305111,
#Partially deleted in new
chr11	72838243	73142261	chr11:72838243-73142261	3	-	72838790	73141877	0	20	631,83,130,221,178,84,135,162,105,117,96,123,129,55,134,145,77,46,98,405,	0,2633,3210,4377,4907,5205,11511,29621,49226,51585,64299,83584,145844,146818,150720,162746,177565,245451,301787,303613,
#Partially deleted in new
chr11	72838398	72843513	chr11:72838398-72843513	1	-	72838790	72843159	789624	5	476,83,130,178,65,	0,2478,3055,4752,5050,
#Partially deleted in new
chr11	72838761	73141913	chr11:72838761-73141913	1	-	72838790	72989004	789624	20	113,83,130,221,178,84,135,162,105,117,72,96,123,129,55,134,77,46,98,57,	0,2115,2692,3859,4389,4687,10993,29103,48708,51067,61495,63781,83066,145326,146300,150202,177047,244933,301269,303095,
#Partially deleted in new
chr11	72843227	72887575	chr11:72843227-72887575	0	-	72849795	72887575	789624	5	101,84,125,162,106,	0,221,6527,24637,44242,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	72869543	72869650	chr11:72869543-72869650	3	-	72869543	72869543	8553170	1	107,	0,
#Deleted in new
chr11	72940497	72941112	chr11:72940497-72941112	7	+	72940497	72940497	16724991	1	615,	0,
#Partially deleted in new
chr11	72983764	72989012	chr11:72983764-72989012	0	-	72983828	72989012	789624	4	88,129,55,49,	0,323,1297,5199,
#Partially deleted in new
chr11	72989000	73141344	chr11:72989000-73141344	0	-	72989000	73140086	789624	6	97,145,77,46,98,124,	0,11989,26808,94694,151030,152220,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	73176693	73181696	chr11:73176693-73181696	3	+	73176693	73176693	8553170	2	93,525,	0,4478,
#Partially deleted in new
chr11	73218297	73235932	chr11:73218297-73235932	1	+	73234159	73235293	0	3	135,195,1777,	0,9683,15858,
#Partially deleted in new
chr11	73218298	73236352	chr11:73218298-73236352	3	+	73234159	73235293	0	3	134,195,2331,	0,9682,15723,
#Partially deleted in new
chr11	73218456	73235934	chr11:73218456-73235934	1	+	73234159	73235293	0	3	200,195,1779,	0,9524,15699,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	73238974	73242335	chr11:73238974-73242335	3	+	73238974	73238974	8553170	1	3361,	0,
#Partially deleted in new
chr11	73248778	73249867	chr11:73248778-73249867	7	+	73248778	73248778	16724991	2	220,544,	0,545,
#Partially deleted in new
chr11	73264504	73297790	chr11:73264504-73297790	1	+	73296518	73297505	0	3	145,160,1306,	0,7802,31980,
#Partially deleted in new
chr11	73264509	73297805	chr11:73264509-73297805	1	+	73296518	73297505	0	4	140,127,86,1321,	0,7830,31220,31975,
#Partially deleted in new
chr11	73264516	73297805	chr11:73264516-73297805	1	+	73296518	73297505	0	4	133,160,86,1321,	0,7790,31213,31968,
#Partially deleted in new
chr11	73264538	73297802	chr11:73264538-73297802	1	+	73296518	73297505	0	3	111,86,1318,	0,31191,31946,
#Partially deleted in new
chr11	73265229	73296903	chr11:73265229-73296903	0	+	73296518	73296903	789624	3	236,86,419,	0,30500,31255,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	73265235	73298599	chr11:73265235-73298599	3	+	73296518	73297505	0	3	230,86,2115,	0,30494,31249,
#Partially deleted in new
chr11	73269893	73297805	chr11:73269893-73297805	1	+	73296518	73297505	0	4	262,160,86,1321,	0,2413,25836,26591,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	73271521	73297804	chr11:73271521-73297804	1	+	73296518	73297505	0	3	945,86,1320,	0,24208,24963,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	73272201	73298617	chr11:73272201-73298617	1	+	73296518	73297505	0	2	265,2133,	0,24283,
#Partially deleted in new
chr11	73272419	73297169	chr11:73272419-73297169	0	+	73296518	73297169	789624	4	47,86,56,146,	0,23310,24065,24604,
#Partially deleted in new
chr11	73289406	73297254	chr11:73289406-73297254	0	+	73296518	73297254	789624	2	30,770,	0,7078,
#Deleted in new
chr11	73292781	73297770	chr11:73292781-73297770	1	+	73296518	73297505	0	2	139,1286,	0,3703,
#Deleted in new
chr11	73307234	73309361	chr11:73307234-73309361	3	-	73307234	73307234	8553170	3	322,683,690,	0,647,1437,
#Partially deleted in new
chr11	73308288	73369091	chr11:73308288-73369091	3	+	73308638	73367780	789624	21	3542,78,183,117,93,177,51,110,86,119,214,74,200,302,250,87,68,149,175,270,1508,	0,38594,44541,47244,47572,47886,48420,48736,48953,51545,52031,52799,53751,54144,54917,55458,55883,56163,57101,57389,59295,
#Partially deleted in new
chr11	73311564	73347195	chr11:73311564-73347195	0	+	73311564	73347195	789624	2	266,313,	0,35318,
#Partially deleted in new
chr11	73342923	73369388	chr11:73342923-73369388	1	+	73343142	73367780	789624	21	354,78,183,117,93,177,51,110,86,119,214,74,200,302,250,87,68,149,175,270,1805,	0,3959,9906,12609,12937,13251,13785,14101,14318,16910,17396,18164,19116,19509,20282,20823,21248,21528,22466,22754,24660,
#Partially deleted in new
chr11	73342995	73353262	chr11:73342995-73353262	0	+	73342995	73342995	8553170	3	282,78,433,	0,3887,9834,
#Deleted in new
chr11	73356476	73357092	chr11:73356476-73357092	0	+	73356476	73356476	8553170	2	283,68,	0,548,
#Deleted in new
chr11	73364213	73365122	chr11:73364213-73365122	0	+	73364213	73364213	8553170	2	26,671,	0,238,
#Partially deleted in new
chr11	73365224	73367943	chr11:73365224-73367943	0	+	73365224	73365224	8553170	3	340,270,360,	0,453,2359,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	73376263	73397472	chr11:73376263-73397472	3	+	73389136	73395491	789624	11	236,70,75,167,80,258,81,82,258,199,2029,	0,12848,14287,14491,14880,15947,17573,17972,18213,18823,19180,
#Partially deleted in new
chr11	73376399	73391160	chr11:73376399-73391160	0	+	73389136	73391160	789624	7	100,71,86,70,75,167,17,	0,7946,8136,12712,14151,14355,14744,
#Partially deleted in new
chr11	73376407	73394494	chr11:73376407-73394494	0	+	73389136	73393861	789624	6	92,70,75,167,81,259,	0,12704,14143,14347,17429,17828,
#Partially deleted in new
chr11	73376667	73396640	chr11:73376667-73396640	1	+	73389136	73395491	789624	11	202,70,75,167,80,258,81,82,258,199,1197,	0,12444,13883,14087,14476,15543,17169,17568,17809,18419,18776,
#Deleted in new
chr11	73391981	73396644	chr11:73391981-73396644	0	+	73391981	73391981	8553170	3	2336,809,1201,	0,2495,3462,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	73393243	73397474	chr11:73393243-73397474	0	+	73393243	73393243	8553170	5	674,82,258,199,2031,	0,992,1233,1843,2200,
#Deleted in new
chr11	73393683	73395121	chr11:73393683-73395121	0	+	73393683	73393683	8553170	3	234,499,35,	0,552,1403,
#Deleted in new
chr11	73395558	73396436	chr11:73395558-73396436	3	-	73395558	73395558	8553170	2	199,553,	0,325,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	73400486	73598189	chr11:73400486-73598189	1	-	73407530	73468474	789624	9	6258,131,175,143,126,27,81,88,267,	0,7026,9000,10907,19387,24535,30203,67918,197436,
#Partially deleted in new
chr11	73405296	73410682	chr11:73405296-73410682	0	+	73405296	73405296	8553170	2	88,197,	0,5189,
#Partially deleted in new
chr11	73405296	73410672	chr11:73405296-73410672	3	+	73405296	73405296	8553170	3	88,59,187,	0,1146,5189,
#Partially deleted in new
chr11	73405982	73598183	chr11:73405982-73598183	3	-	73407530	73468474	789624	8	762,131,175,143,126,81,88,261,	0,1530,3504,5411,13891,24707,62422,191940,
#Partially deleted in new
chr11	73405982	73598098	chr11:73405982-73598098	1	-	73407530	73468474	789624	6	762,131,126,81,88,176,	0,1530,13891,24707,62422,191940,
#Partially deleted in new
chr11	73412251	73598097	chr11:73412251-73598097	0	-	73412251	73412251	8553170	6	52,126,12,27,81,175,	0,7622,8638,12770,18438,185671,
#Partially deleted in new
chr11	73430162	73468492	chr11:73430162-73468492	0	-	73430162	73430162	8553170	2	608,88,	0,38242,
#Deleted in new
chr11	73452019	73452344	chr11:73452019-73452344	7	+	73452019	73452019	16724991	1	325,	0,
#Deleted in new
chr11	73510657	73510820	chr11:73510657-73510820	7	+	73510657	73510657	16724991	1	163,	0,
#Deleted in new
chr11	73580252	73580517	chr11:73580252-73580517	7	+	73580252	73580252	16724991	1	265,	0,
#Deleted in new
chr11	73640478	73641037	chr11:73640478-73641037	7	+	73640478	73640478	16724991	1	559,	0,
#Partially deleted in new
chr11	73646177	73662819	chr11:73646177-73662819	3	+	73646608	73661602	789624	8	449,76,153,103,40,105,100,1354,	0,2834,4375,5610,6797,9625,14575,15288,
#Partially deleted in new
chr11	73646177	73662819	chr11:73646177-73662819	1	+	73646608	73661602	789624	7	449,76,153,103,40,100,1354,	0,2834,4375,5610,6797,14575,15288,
#Partially deleted in new
chr11	73646578	73651437	chr11:73646578-73651437	0	+	73649050	73651437	789624	5	48,141,76,153,15,	0,810,2433,3974,4844,
#Partially deleted in new
chr11	73647548	73662819	chr11:73647548-73662819	1	+	73649050	73661602	789624	7	190,76,153,103,40,100,1354,	0,1463,3004,4239,5426,13204,13917,
#Partially deleted in new
chr11	73647608	73662819	chr11:73647608-73662819	1	+	73649050	73661602	789624	8	130,76,153,103,40,105,100,1354,	0,1403,2944,4179,5366,8194,13144,13857,
#Partially deleted in new
chr11	73647625	73661665	chr11:73647625-73661665	1	+	73649050	73661602	789624	6	113,76,103,40,100,200,	0,1386,4162,5349,13127,13840,
#Partially deleted in new
chr11	73647652	73651879	chr11:73647652-73651879	0	+	73647652	73647652	8553170	5	86,76,153,149,92,	0,1359,2900,3768,4135,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	73647654	73660770	chr11:73647654-73660770	0	+	73649050	73660770	789624	7	84,93,76,153,103,40,18,	0,531,1357,2898,4133,5320,13098,
#Partially deleted in new
chr11	73647654	73660873	chr11:73647654-73660873	0	+	73649050	73660873	789624	6	84,76,153,103,40,121,	0,1357,2898,4133,5320,13098,
#Partially deleted in new
chr11	73647654	73660756	chr11:73647654-73660756	0	+	73649050	73660756	789624	7	84,76,174,103,40,105,4,	0,1357,2877,4133,5320,8148,13098,
#Partially deleted in new
chr11	73647654	73651851	chr11:73647654-73651851	0	+	73649050	73651851	789624	4	241,76,153,64,	0,1357,2898,4133,
#Partially deleted in new
chr11	73647654	73660766	chr11:73647654-73660766	0	+	73649050	73660766	789624	7	84,76,153,103,40,92,14,	0,1357,2898,4133,5320,5715,13098,
#Partially deleted in new
chr11	73647688	73652070	chr11:73647688-73652070	0	+	73647688	73647688	8553170	4	50,76,153,283,	0,1323,2864,4099,
#Partially deleted in new
chr11	73647713	73661496	chr11:73647713-73661496	0	+	73649050	73661496	789624	7	153,76,153,103,40,100,31,	0,1298,2839,4074,5261,13039,13752,
#Partially deleted in new
chr11	73647931	73661522	chr11:73647931-73661522	0	+	73649050	73661522	789624	7	156,76,153,103,40,100,57,	0,1080,2621,3856,5043,12821,13534,
#Partially deleted in new
chr11	73648689	73661720	chr11:73648689-73661720	1	+	73649050	73661602	789624	6	398,153,103,40,100,255,	0,1863,3098,4285,12063,12776,
#Partially deleted in new
chr11	73648913	73660795	chr11:73648913-73660795	0	+	73649050	73660795	789624	6	174,153,103,40,105,43,	0,1639,2874,4061,6889,11839,
#Partially deleted in new
chr11	73649011	73661551	chr11:73649011-73661551	0	+	73649050	73661551	789624	6	76,174,103,40,100,86,	0,1520,2776,3963,11741,12454,
#Partially deleted in new
chr11	73652439	73662812	chr11:73652439-73662812	0	+	73652439	73652439	8553170	3	575,100,1347,	0,8313,9026,
#Partially deleted in new
chr11	73652619	73660925	chr11:73652619-73660925	0	+	73652619	73652619	8553170	2	395,173,	0,8133,
#Deleted in new
chr11	73660308	73661734	chr11:73660308-73661734	0	+	73660308	73660308	8553170	2	544,269,	0,1157,
#Deleted in new
chr11	73662352	73662815	chr11:73662352-73662815	0	+	73662352	73662352	8553170	2	70,305,	0,158,
#Partially deleted in new
chr11	73675637	73761137	chr11:73675637-73761137	3	-	73677897	73760635	0	8	2325,67,94,112,106,54,59,572,	0,4016,31782,40613,43147,45208,55127,84928,
#Partially deleted in new
chr11	73675895	73761091	chr11:73675895-73761091	1	-	73677897	73760635	0	8	2067,67,94,112,106,54,59,526,	0,3758,31524,40355,42717,44950,54869,84670,
#Partially deleted in new
chr11	73677398	73760095	chr11:73677398-73760095	1	-	73677897	73730794	0	8	564,67,94,112,106,54,59,48,	0,2255,30021,38852,41386,43447,53366,82649,
#Partially deleted in new
chr11	73677590	73761074	chr11:73677590-73761074	1	-	73716281	73760635	789624	7	372,67,94,112,54,59,509,	0,2063,29829,38660,43255,53174,82975,
#Partially deleted in new
chr11	73677893	73761074	chr11:73677893-73761074	1	-	73677897	73760635	0	5	69,67,54,59,509,	0,1760,42952,52871,82672,
#Partially deleted in new
chr11	73677907	73760638	chr11:73677907-73760638	0	-	73716281	73760635	789624	6	55,94,112,54,59,73,	0,29512,38343,42938,52857,82658,
#Partially deleted in new
chr11	73677943	73761119	chr11:73677943-73761119	0	-	73677943	73760635	789624	4	19,67,59,554,	0,1710,52821,82622,
#Partially deleted in new
chr11	73679685	73760658	chr11:73679685-73760658	0	-	73716281	73760635	789624	6	35,94,112,54,59,93,	0,27734,36565,41160,51079,80880,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	73704163	73760610	chr11:73704163-73760610	0	-	73704163	73704163	8553170	7	52,94,112,106,54,59,45,	0,3256,12087,14449,16682,26601,56402,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	73722348	73722694	chr11:73722348-73722694	3	+	73722348	73722348	8553170	2	128,82,	0,264,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	73729463	73761017	chr11:73729463-73761017	0	-	73729463	73729463	8553170	2	1360,452,	0,31102,
#Deleted in new
chr11	73760562	73761070	chr11:73760562-73761070	3	+	73760562	73760562	8553170	2	168,260,	0,248,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	73787315	73864611	chr11:73787315-73864611	3	+	73787971	73864370	0	8	677,53,38,89,170,103,90,316,	0,17711,20997,38392,57491,72591,75856,76980,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	73787871	73865133	chr11:73787871-73865133	0	+	73787971	73823026	789624	9	121,53,38,58,89,170,103,90,838,	0,17155,20441,35141,37836,56935,72035,75300,76424,
#Partially deleted in new
chr11	73787882	73860480	chr11:73787882-73860480	0	+	73787971	73825786	789624	5	110,53,89,170,574,	0,17144,37825,56924,72024,
#Partially deleted in new
chr11	73787884	73864424	chr11:73787884-73864424	0	+	73787971	73825786	789624	7	108,53,89,170,103,90,129,	0,17142,37823,56922,72022,75287,76411,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	73787890	73844934	chr11:73787890-73844934	0	+	73844902	73844934	789624	6	102,53,38,89,121,128,	0,17136,20422,37817,55356,56916,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	73787894	73864598	chr11:73787894-73864598	1	+	73844902	73864370	789624	10	98,156,97,53,38,89,170,103,90,303,	0,1440,14186,17132,20418,37813,56912,72012,75277,76401,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	73787905	73864605	chr11:73787905-73864605	1	+	73844902	73864370	789624	8	87,156,53,89,170,103,90,310,	0,1429,17121,37802,56901,72001,75266,76390,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	73787905	73844981	chr11:73787905-73844981	0	+	73844902	73844981	789624	6	87,156,53,38,89,175,	0,1429,17121,20407,37802,56901,
#Partially deleted in new
chr11	73787908	73864602	chr11:73787908-73864602	1	+	73787971	73864370	789624	6	84,53,38,89,90,307,	0,17118,20404,37799,75263,76387,
#Partially deleted in new
chr11	73787929	73844941	chr11:73787929-73844941	0	+	73844902	73844941	789624	3	63,89,135,	0,37778,56877,
#Partially deleted in new
chr11	73787956	73864607	chr11:73787956-73864607	0	+	73787971	73844847	789624	6	36,53,38,170,90,312,	0,17070,20356,56850,75215,76339,
#Partially deleted in new
chr11	73808307	73845137	chr11:73808307-73845137	0	+	73808307	73808307	8553170	3	43,89,331,	0,17400,36499,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	73832381	73832690	chr11:73832381-73832690	3	-	73832381	73832381	8553170	1	309,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	73842112	73864599	chr11:73842112-73864599	1	+	73844902	73864370	789624	5	1255,170,103,90,304,	0,2694,17794,21059,22183,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	73850468	73851211	chr11:73850468-73851211	7	-	73850468	73850468	16724991	2	217,215,	0,528,
#Partially deleted in new
chr11	73872666	73876988	chr11:73872666-73876988	3	-	73873114	73873378	789624	2	728,232,	0,4090,
#Partially deleted in new
chr11	73872668	73876674	chr11:73872668-73876674	1	-	73873114	73873378	789624	2	726,196,	0,3810,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	73872761	73874475	chr11:73872761-73874475	1	-	73873114	73873405	789624	2	983,55,	0,1659,
#Partially deleted in new
chr11	73872996	73876843	chr11:73872996-73876843	1	-	73873114	73873378	789624	3	398,97,87,	0,3482,3760,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	73875758	73876566	chr11:73875758-73876566	0	-	73875758	73875758	8553170	2	361,88,	0,720,
#Deleted in new
chr11	73876154	73876901	chr11:73876154-73876901	0	-	73876154	73876154	8553170	2	421,145,	0,602,
#Partially deleted in new
chr11	73876698	73927570	chr11:73876698-73927570	1	+	73899208	73927362	789624	12	43,41,104,90,99,151,195,92,116,83,83,286,	0,2080,10655,14413,22447,23571,32700,37714,39846,42251,47916,50586,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	73876968	73931124	chr11:73876968-73931124	3	+	73877021	73927362	789624	12	100,41,104,90,99,151,195,92,116,83,83,3840,	0,1810,10385,14143,22177,23301,32430,37444,39576,41981,47646,50316,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	73876973	73880703	chr11:73876973-73880703	0	+	73876973	73876973	8553170	2	95,1925,	0,1805,
#Partially deleted in new
chr11	73876994	73927613	chr11:73876994-73927613	1	+	73899208	73927362	789624	12	312,41,104,90,99,151,195,92,116,83,83,329,	0,1784,10359,14117,22151,23275,32404,37418,39550,41955,47620,50290,
#Partially deleted in new
chr11	73876996	73909512	chr11:73876996-73909512	0	+	73899208	73909512	789624	7	72,37,104,90,99,151,114,	0,1786,10357,14115,22149,23273,32402,
#Partially deleted in new
chr11	73878776	73916616	chr11:73878776-73916616	0	+	73899230	73916616	789624	8	43,104,90,99,110,195,92,72,	0,8577,12335,20369,21534,30622,35636,37768,
#Partially deleted in new
chr11	73887200	73900405	chr11:73887200-73900405	0	+	73887331	73900405	789624	4	257,90,99,136,	0,3911,11945,13069,
#Partially deleted in new
chr11	73888793	73927725	chr11:73888793-73927725	1	+	73889050	73927362	789624	10	452,90,99,151,195,92,116,83,83,441,	0,2318,10352,11476,20605,25619,27751,30156,35821,38491,
#Partially deleted in new
chr11	73900367	73916645	chr11:73900367-73916645	0	+	73900367	73916645	789624	3	53,195,101,	0,9031,16177,
#Deleted in new
chr11	73921664	73922196	chr11:73921664-73922196	7	-	73921664	73921664	16724991	1	532,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	73928532	73930372	chr11:73928532-73930372	0	+	73928532	73928532	8553170	2	278,105,	0,1735,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	73950318	73970287	chr11:73950318-73970287	3	+	73951069	73970114	789624	8	819,104,162,158,114,114,77,327,	0,7998,9175,14559,15819,18026,18927,19642,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	73951025	73959871	chr11:73951025-73959871	0	+	73951025	73951025	8553170	3	112,104,378,	0,7291,8468,
#Partially deleted in new
chr11	73963656	73970287	chr11:73963656-73970287	3	-	73963656	73963656	8553170	7	539,74,167,111,117,77,327,	0,794,1212,2481,4685,5589,6304,
#Deleted in new
chr11	73964062	73965032	chr11:73964062-73965032	0	-	73964062	73964062	8553170	3	133,74,164,	0,388,806,
#Partially deleted in new
chr11	73964827	73970230	chr11:73964827-73970230	1	+	73968263	73970114	789624	5	208,114,243,77,270,	0,1310,3388,4418,5133,
#Partially deleted in new
chr11	73964842	73970238	chr11:73964842-73970238	0	+	73964842	73970114	789624	5	193,114,114,77,278,	0,1295,3502,4403,5118,
#Partially deleted in new
chr11	73965235	73970366	chr11:73965235-73970366	1	+	73968263	73970114	789624	6	1016,224,203,77,175,84,	0,2703,3020,4010,4725,5047,
#Partially deleted in new
chr11	73974666	73983307	chr11:73974666-73983307	3	-	73975006	73978378	789624	8	455,181,102,195,211,225,157,587,	0,824,1974,2156,3219,3586,6809,8054,
#Partially deleted in new
chr11	73974708	73982830	chr11:73974708-73982830	1	-	73975077	73978378	789624	7	413,102,195,211,225,157,110,	0,1932,2114,3177,3544,6767,8012,
#Partially deleted in new
chr11	73974851	73978141	chr11:73974851-73978141	0	-	73975006	73978141	789624	5	270,181,102,195,256,	0,639,1789,1971,3034,
#Partially deleted in new
chr11	73975529	73977006	chr11:73975529-73977006	0	-	73975529	73977006	789624	3	103,102,184,	0,1111,1293,
#Deleted in new
chr11	73976640	73977064	chr11:73976640-73977064	0	-	73976640	73976640	8553170	2	102,242,	0,182,
#Partially deleted in new
chr11	73978190	73982843	chr11:73978190-73982843	0	-	73978190	73978190	8553170	3	287,157,123,	0,3285,4530,
#Partially deleted in new
chr11	73978280	73980938	chr11:73978280-73980938	0	-	73978280	73978378	789624	2	197,267,	0,2391,
#Partially deleted in new
chr11	73978576	73982843	chr11:73978576-73982843	0	-	73978576	73978576	8553170	3	258,157,123,	0,2899,4144,
#Partially deleted in new
chr11	73978695	73982843	chr11:73978695-73982843	0	-	73978695	73978695	8553170	4	139,117,157,123,	0,1240,2780,4025,
#Partially deleted in new
chr11	73981147	73982843	chr11:73981147-73982843	0	-	73981147	73981147	8553170	2	485,123,	0,1573,
#Deleted in new
chr11	73991282	73992180	chr11:73991282-73992180	7	-	73991282	73991282	16724991	1	898,	0,
#Deleted in new
chr11	73994971	73996151	chr11:73994971-73996151	7	-	73994971	73994971	16724991	1	1180,	0,
#Partially deleted in new
chr11	74000280	74009435	chr11:74000280-74009435	3	-	74001411	74007042	789624	7	1246,181,102,204,211,221,458,	0,3546,4203,5449,5888,6636,8697,
#Deleted in new
chr11	74001477	74002254	chr11:74001477-74002254	0	-	74001477	74001477	8553170	2	49,515,	0,262,
#Partially deleted in new
chr11	74003447	74009085	chr11:74003447-74009085	1	-	74003822	74007042	789624	6	560,102,204,211,221,108,	0,1036,2282,2721,3469,5530,
#Deleted in new
chr11	74006216	74007304	chr11:74006216-74007304	0	-	74006216	74007042	789624	2	163,388,	0,700,
#Partially deleted in new
chr11	74012713	74171019	chr11:74012713-74171019	1	-	74013384	74170792	789624	33	812,112,928,221,165,134,206,65,139,348,603,90,269,124,173,184,181,247,152,495,123,119,113,210,155,148,129,133,248,224,158,270,282,	0,15573,20637,24764,29340,35491,36623,41893,44692,61539,65401,72167,72904,78099,79702,81102,82514,85295,87811,90417,93657,96320,101066,101670,105514,110274,120130,120711,126006,126891,148685,155630,158024,
#Partially deleted in new
chr11	74012717	74085795	chr11:74012717-74085795	0	-	74037546	74085795	789624	13	808,112,928,175,165,134,206,65,139,348,603,90,178,	0,15569,20633,24760,29336,35487,36619,41889,44688,61535,65397,72163,72900,
#Partially deleted in new
chr11	74013443	74033909	chr11:74013443-74033909	0	-	74013443	74013443	8553170	4	82,203,112,559,	0,3155,14843,19907,
#Partially deleted in new
chr11	74033829	74042202	chr11:74033829-74042202	0	-	74033829	74033829	8553170	3	449,221,149,	0,3648,8224,
#Partially deleted in new
chr11	74034431	74042160	chr11:74034431-74042160	0	-	74034431	74034431	8553170	3	177,146,107,	0,3046,7622,
#Partially deleted in new
chr11	74034433	74171019	chr11:74034433-74171019	3	-	74034597	74170792	789624	31	175,221,165,134,206,65,139,348,603,90,269,124,173,184,181,247,152,495,123,119,113,210,155,148,129,133,248,224,158,270,282,	0,3044,7620,13771,14903,20173,22972,39819,43681,50447,51184,56379,57982,59382,60794,63575,66091,68697,71937,74600,79346,79950,83794,88554,98410,98991,104286,105171,126965,133910,136304,
#Partially deleted in new
chr11	74034441	74090877	chr11:74034441-74090877	0	-	74034541	74090877	789624	12	126,221,165,134,206,65,139,348,603,90,269,65,	0,3036,7612,13763,14895,20165,22964,39811,43673,50439,51176,56371,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	74036127	74049397	chr11:74036127-74049397	0	-	74036476	74049397	789624	5	357,146,165,134,61,	0,1350,5926,12077,13209,
#Partially deleted in new
chr11	74049518	74070869	chr11:74049518-74070869	0	-	74049518	74049518	8553170	4	24,65,139,364,	0,5088,7887,20987,
#Partially deleted in new
chr11	74078184	74085599	chr11:74078184-74085599	0	-	74078184	74078184	8553170	3	533,90,78,	0,6696,7337,
#Partially deleted in new
chr11	74085521	74091364	chr11:74085521-74091364	0	-	74085521	74085521	8553170	3	365,124,67,	0,5291,5776,
#Partially deleted in new
chr11	74100608	74110588	chr11:74100608-74110588	0	-	74100608	74100608	8553170	5	68,495,123,119,66,	0,2522,5762,8425,9914,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	74113200	74170957	chr11:74113200-74170957	0	-	74113200	74113200	8553170	11	692,210,155,148,129,133,248,224,158,270,220,	0,1183,5027,9787,19643,20224,25519,26404,48198,55143,57537,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	74128529	74170984	chr11:74128529-74170984	1	-	74129538	74170792	789624	8	1313,129,133,248,224,158,270,247,	0,4314,4895,10190,11075,32869,39814,42208,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	74129173	74133630	chr11:74129173-74133630	0	-	74129173	74129173	8553170	3	799,129,206,	0,3670,4251,
#Deleted in new
chr11	74142150	74142358	chr11:74142150-74142358	7	+	74142150	74142150	16724991	1	208,	0,
#Partially deleted in new
chr11	74161433	74171210	chr11:74161433-74171210	0	-	74161433	74171210	789624	3	123,270,181,	0,6910,9596,
#Partially deleted in new
chr11	74168013	74170868	chr11:74168013-74170868	0	-	74168013	74168013	8553170	2	600,131,	0,2724,
#Partially deleted in new
chr11	74168232	74171172	chr11:74168232-74171172	0	-	74168232	74168232	8553170	2	381,143,	0,2797,
#Partially deleted in new
chr11	74171098	74254703	chr11:74171098-74254703	3	+	74171421	74253510	0	14	424,94,93,58,52,155,91,66,124,130,45,65,68,1212,	0,32629,33254,51213,54106,59146,59813,64802,68034,74977,75980,79855,80549,82393,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	74171266	74205923	chr11:74171266-74205923	0	+	74171266	74171266	8553170	4	256,94,93,147,	0,32461,33086,34510,
#Partially deleted in new
chr11	74171321	74254703	chr11:74171321-74254703	1	+	74171421	74253510	0	14	201,94,93,58,52,155,91,66,124,172,45,65,68,1212,	0,32406,33031,50990,53883,58923,59590,64579,67811,74712,75757,79632,80326,82170,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	74198747	74198854	chr11:74198747-74198854	3	-	74198747	74198747	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	74204868	74205746	chr11:74204868-74205746	3	+	74204868	74204868	8553170	1	878,	0,
#Partially deleted in new
chr11	74230784	74254703	chr11:74230784-74254703	0	+	74230784	74230784	8553170	8	218,66,124,130,45,65,68,1212,	0,5116,8348,15291,16294,20169,20863,22707,
#Partially deleted in new
chr11	74235724	74251677	chr11:74235724-74251677	0	+	74235724	74235724	8553170	6	242,124,130,45,65,30,	0,3408,10351,11354,15229,15923,
#Partially deleted in new
chr11	74235800	74247910	chr11:74235800-74247910	0	-	74235800	74235800	8553170	3	191,181,48,	0,7587,12062,
#Partially deleted in new
chr11	74237787	74254703	chr11:74237787-74254703	0	+	74237787	74237787	8553170	5	1469,130,45,762,1212,	0,8288,9291,13166,15704,
#Partially deleted in new
chr11	74238892	74253563	chr11:74238892-74253563	0	+	74238892	74238892	8553170	6	364,130,45,65,68,72,	0,7183,8186,12061,12755,14599,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr11	74247486	74311631	chr11:74247486-74311631	0	-	74287286	74311611	789624	16	515,214,138,97,69,63,160,65,177,164,176,52,150,224,143,220,	0,12436,19694,20658,22165,26058,29498,31901,38322,38741,39629,41592,50725,54882,56783,63925,
#Partially deleted in new
chr11	74248242	74254702	chr11:74248242-74254702	0	+	74248242	74248242	8553170	3	2776,68,1211,	0,3405,5249,
#Deleted in new
chr11	74252413	74252552	chr11:74252413-74252552	3	-	74252413	74252413	8553170	1	139,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	74259840	74269669	chr11:74259840-74269669	0	-	74267247	74269669	789624	4	296,138,97,18,	0,7340,8304,9811,
#Partially deleted in new
chr11	74266654	74311657	chr11:74266654-74311657	3	-	74267247	74311611	789624	13	664,97,69,63,160,65,177,164,52,150,224,143,246,	0,1490,2997,6890,10330,12733,19154,19573,22424,31557,35714,37615,44757,
#Partially deleted in new
chr11	74266656	74311640	chr11:74266656-74311640	1	-	74267060	74311611	789624	13	662,90,69,63,160,65,177,164,52,150,224,143,229,	0,1488,2995,6888,10328,12731,19152,19571,22422,31555,35712,37613,44755,
#Partially deleted in new
chr11	74266656	74311624	chr11:74266656-74311624	0	-	74302586	74311611	789624	12	662,97,69,63,65,177,164,52,150,224,109,213,	0,1488,2995,6888,12731,19152,19571,22422,31555,35712,37647,44755,
#Deleted in new
chr11	74285432	74286255	chr11:74285432-74286255	0	-	74285432	74285432	8553170	2	553,28,	0,795,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	74311361	74324705	chr11:74311361-74324705	3	+	74311361	74311361	789624	7	88,122,101,68,1297,116,365,	0,463,757,10872,11345,12733,12979,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr11	74330317	74398473	chr11:74330317-74398473	3	-	74336651	74398161	789624	14	6437,134,190,130,94,181,98,190,194,84,85,107,168,423,	0,8150,12143,12567,13005,15151,16414,16830,21065,38174,40584,41393,44097,67733,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	74354442	74355720	chr11:74354442-74355720	7	+	74354442	74354442	16724991	1	1278,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	74397548	74428565	chr11:74397548-74428565	1	+	74397548	74397548	8553170	3	121,137,233,	0,220,30784,
#Partially deleted in new
chr11	74397652	74485742	chr11:74397652-74485742	3	+	74397652	74397652	8553170	4	17,137,72,118,	0,116,86524,87972,
#Deleted in new
chr11	74397745	74398408	chr11:74397745-74398408	0	-	74397745	74397745	8553170	1	663,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	74399236	74399333	chr11:74399236-74399333	3	+	74399236	74399236	5263520	1	97,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	74409059	74416379	chr11:74409059-74416379	3	+	74409059	74409059	8553170	2	106,533,	0,6787,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	74454840	74467628	chr11:74454840-74467628	3	-	74457251	74457563	0	3	2763,149,231,	0,7114,12557,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	74455347	74456825	chr11:74455347-74456825	3	+	74455347	74455347	8553170	2	425,184,	0,1294,
#Partially deleted in new
chr11	74457081	74462367	chr11:74457081-74462367	1	-	74457251	74457563	0	2	522,413,	0,4873,
#Partially deleted in new
chr11	74457265	74467729	chr11:74457265-74467729	0	-	74457265	74457563	789624	3	338,149,98,	0,4689,10366,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	74457405	74467549	chr11:74457405-74467549	0	-	74457405	74457563	789624	4	198,149,108,152,	0,4549,5342,9992,
#Partially deleted in new
chr11	74457414	74467550	chr11:74457414-74467550	0	-	74457414	74457563	789624	4	189,149,64,153,	0,4540,6847,9983,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	74457526	74467549	chr11:74457526-74467549	0	-	74457526	74457563	789624	5	77,149,108,64,152,	0,4428,5221,6735,9871,
#Deleted in new
chr11	74482249	74482542	chr11:74482249-74482542	7	+	74482249	74482249	16724991	1	293,	0,
#Deleted in new
chr11	74485579	74486051	chr11:74485579-74486051	7	-	74485579	74485579	16724991	1	472,	0,
#Partially deleted in new
chr11	74491711	74493315	chr11:74491711-74493315	0	-	74492244	74493315	789624	2	653,116,	0,1488,
#Partially deleted in new
chr11	74491842	74493733	chr11:74491842-74493733	3	-	74492134	74493703	789624	2	522,496,	0,1395,
#Partially deleted in new
chr11	74492327	74493647	chr11:74492327-74493647	0	-	74492327	74493647	789624	2	37,181,	0,1139,
#Partially deleted in new
chr11	74493850	74618594	chr11:74493850-74618594	0	+	74604692	74618594	789624	6	123,56,103,40,133,58,	0,100210,110841,117648,119027,124686,
#Partially deleted in new
chr11	74592529	74643057	chr11:74592529-74643057	3	+	74592658	74640766	0	12	189,56,103,40,133,268,73,166,107,113,79,2494,	0,1531,12162,18969,20348,26007,27487,32878,36687,42053,43667,48034,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	74592555	74595502	chr11:74592555-74595502	0	+	74592555	74592555	8553170	3	163,56,356,	0,1505,2591,
#Partially deleted in new
chr11	74592604	74641114	chr11:74592604-74641114	1	+	74604692	74640766	0	12	433,56,103,40,133,268,73,166,107,113,79,551,	0,1456,12087,18894,20273,25932,27412,32803,36612,41978,43592,47959,
#Partially deleted in new
chr11	74592604	74641114	chr11:74592604-74641114	1	+	74612936	74640766	0	11	114,56,40,133,268,73,166,107,113,79,551,	0,1456,18894,20273,25932,27412,32803,36612,41978,43592,47959,
#Partially deleted in new
chr11	74592643	74618770	chr11:74592643-74618770	0	+	74604692	74618770	789624	6	288,56,103,40,133,234,	0,1417,12048,18855,20234,25893,
#Partially deleted in new
chr11	74604562	74618675	chr11:74604562-74618675	0	+	74604692	74618675	789624	4	232,40,133,139,	0,6936,8315,13974,
#Partially deleted in new
chr11	74625503	74669117	chr11:74625503-74669117	0	+	74625503	74668856	789624	5	70,107,113,79,341,	0,3713,9079,10693,43273,
#Partially deleted in new
chr11	74628862	74640965	chr11:74628862-74640965	0	+	74628862	74628862	8553170	4	461,113,79,402,	0,5720,7334,11701,
#Partially deleted in new
chr11	74638613	74641062	chr11:74638613-74641062	0	+	74638613	74640766	789624	2	65,499,	0,1950,
#Deleted in new
chr11	74652635	74652911	chr11:74652635-74652911	7	+	74652635	74652635	16724991	1	276,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	74685223	74685505	chr11:74685223-74685505	3	+	74685223	74685223	8553170	1	282,	0,
#Partially deleted in new
chr11	74696428	74719303	chr11:74696428-74719303	0	-	74704653	74718854	789624	9	157,93,174,195,169,56,94,143,584,	0,776,6365,6876,8057,10058,11873,14420,22291,
#Partially deleted in new
chr11	74696428	74731385	chr11:74696428-74731385	3	-	74696508	74730888	789624	11	157,93,174,195,169,56,94,143,94,113,579,	0,776,6365,6876,8057,10058,11873,14420,16957,22291,34378,
#Partially deleted in new
chr11	74696428	74704635	chr11:74696428-74704635	0	-	74696564	74704635	789624	4	157,167,195,150,	0,6372,6876,8057,
#Deleted in new
chr11	74696428	74697694	chr11:74696428-74697694	0	-	74696497	74697694	789624	3	157,93,94,	0,776,1172,
#Partially deleted in new
chr11	74696508	74731385	chr11:74696508-74731385	1	-	74696508	74710932	789624	9	68,174,195,231,94,143,94,113,579,	0,6285,6796,7977,11793,14340,16877,22211,34298,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	74698230	74699658	chr11:74698230-74699658	3	-	74698230	74698230	8553170	1	1428,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	74700921	74731153	chr11:74700921-74731153	0	-	74700921	74700921	8553170	10	586,174,195,169,56,94,143,94,113,347,	0,1872,2383,3564,5565,7380,9927,12464,17798,29885,
#Partially deleted in new
chr11	74702793	74719303	chr11:74702793-74719303	0	-	74706538	74718854	789624	6	174,195,169,56,143,584,	0,511,1692,3693,8055,15926,
#Partially deleted in new
chr11	74702793	74731182	chr11:74702793-74731182	0	-	74702793	74730888	789624	8	174,169,56,94,143,94,113,376,	0,1692,3693,5508,8055,10592,15926,28013,
#Partially deleted in new
chr11	74702793	74719303	chr11:74702793-74719303	0	-	74704653	74718854	789624	7	174,195,169,56,143,94,584,	0,511,1692,3693,8055,10592,15926,
#Deleted in new
chr11	74720267	74720337	chr11:74720267-74720337	3	-	74720267	74720267	5263520	1	70,	0,
#Deleted in new
chr11	74738477	74738796	chr11:74738477-74738796	7	-	74738477	74738477	16724991	1	319,	0,
#Deleted in new
chr11	74745715	74746114	chr11:74745715-74746114	7	-	74745715	74745715	16724991	1	399,	0,
#Partially deleted in new
chr11	74748867	74842413	chr11:74748867-74842413	3	+	74748880	74836730	0	6	515,74,147,119,100,6868,	0,40758,61316,68728,85808,86678,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr11	74807738	74949180	chr11:74807738-74949180	0	-	74843414	74851111	789624	14	448,104,116,199,348,116,94,129,134,73,72,185,68,253,	0,35611,36429,37334,40376,43349,44250,99406,113475,122561,126062,129145,137279,141189,
#Deleted in new
chr11	74830573	74832510	chr11:74830573-74832510	3	-	74830573	74830573	8553170	1	1937,	0,
#Deleted in new
chr11	74836491	74842214	chr11:74836491-74842214	0	+	74836491	74836730	789624	2	270,70,	0,5653,
#Partially deleted in new
chr11	74840229	74949187	chr11:74840229-74949187	3	-	74843199	74940878	789624	19	3224,106,116,199,348,116,94,126,41,218,129,134,98,73,48,185,98,68,260,	0,3624,3938,4843,7885,10858,11759,18928,22751,66009,66915,80984,87161,90070,93595,96654,100555,104788,108698,
#Partially deleted in new
chr11	74840909	74949149	chr11:74840909-74949149	1	-	74843199	74907206	789624	16	2544,106,116,199,348,116,94,41,218,129,134,98,73,72,185,222,	0,2944,3258,4163,7205,10178,11079,22071,65329,66235,80304,86481,89390,92891,95974,108018,
#Partially deleted in new
chr11	74840930	74949200	chr11:74840930-74949200	0	-	74852014	74907206	789624	14	3029,116,199,348,116,94,218,129,134,98,73,72,185,273,	0,3237,4142,7184,10157,11058,65308,66214,80283,86460,89369,92870,95953,107997,
#Partially deleted in new
chr11	74842967	74949116	chr11:74842967-74949116	1	-	74843414	74940878	789624	15	486,116,199,348,116,218,129,134,98,73,48,185,98,68,189,	0,1200,2105,5147,8120,63271,64177,78246,84423,87332,90857,93916,97817,102050,105960,
#Partially deleted in new
chr11	74842967	74906361	chr11:74842967-74906361	0	-	74852014	74906361	789624	8	486,106,116,199,348,116,94,123,	0,886,1200,2105,5147,8120,9021,63271,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	74842969	74864114	chr11:74842969-74864114	0	-	74842969	74842969	8553170	4	1314,199,348,1134,	0,2103,5145,20011,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	74845909	74846209	chr11:74845909-74846209	3	+	74845909	74845909	8553170	1	300,	0,
#Partially deleted in new
chr11	74848124	74852064	chr11:74848124-74852064	0	-	74848124	74848124	8553170	2	338,76,	0,3864,
#Partially deleted in new
chr11	74850869	74906352	chr11:74850869-74906352	0	-	74850869	74850869	8553170	3	334,94,114,	0,1119,55369,
#Partially deleted in new
chr11	74859166	74907221	chr11:74859166-74907221	0	-	74859166	74859166	8553170	3	117,218,77,	0,47072,47978,
#Partially deleted in new
chr11	74906352	74949020	chr11:74906352-74949020	0	-	74906352	74940878	789624	9	104,129,134,98,73,72,185,98,93,	0,792,14861,21038,23947,27448,30531,34432,42575,
#Partially deleted in new
chr11	74906352	74949080	chr11:74906352-74949080	0	-	74906352	74907206	789624	9	104,129,134,98,73,72,185,68,153,	0,792,14861,21038,23947,27448,30531,38665,42575,
#Partially deleted in new
chr11	74906839	74921299	chr11:74906839-74921299	0	-	74906839	74906839	8553170	3	434,124,86,	0,3049,14374,
#Partially deleted in new
chr11	74907147	74949104	chr11:74907147-74949104	0	-	74907147	74907206	789624	5	126,134,185,68,177,	0,14066,29736,37870,41780,
#Partially deleted in new
chr11	74909918	74949075	chr11:74909918-74949075	0	-	74909918	74909918	8553170	8	94,134,98,73,72,185,68,148,	0,11295,17472,20381,23882,26965,35099,39009,
#Partially deleted in new
chr11	74911374	74920006	chr11:74911374-74920006	4	+	74911374	74911374	16724991	2	51,474,	0,8158,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	74913592	74919811	chr11:74913592-74919811	4	+	74913592	74913592	16724991	2	190,279,	0,5940,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	74918828	74920022	chr11:74918828-74920022	5	+	74918828	74918828	16724991	2	197,490,	0,704,
#Deleted in new
chr11	74919586	74919965	chr11:74919586-74919965	5	+	74919586	74919586	16724991	1	379,	0,
#Partially deleted in new
chr11	74921274	74949095	chr11:74921274-74949095	0	-	74921274	74921274	8553170	5	73,73,72,185,168,	0,9025,12526,15609,27653,
#Partially deleted in new
chr11	74927390	74949091	chr11:74927390-74949091	0	-	74927390	74927390	8553170	5	98,73,48,185,164,	0,2909,6434,9493,21537,
#Partially deleted in new
chr11	74930299	74949162	chr11:74930299-74949162	0	-	74930299	74930299	8553170	4	73,185,68,235,	0,6584,14718,18628,
#Partially deleted in new
chr11	74931764	74949131	chr11:74931764-74949131	0	-	74931764	74931764	8553170	5	32,72,185,68,204,	0,2036,5119,13253,17163,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	74933260	74936916	chr11:74933260-74936916	0	-	74933260	74933260	8553170	2	612,33,	0,3623,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	74949246	74979031	chr11:74949246-74979031	3	+	74949285	74977043	789624	5	153,84,161,135,2175,	0,15787,16516,20318,27610,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	74949246	74979031	chr11:74949246-74979031	1	+	74949285	74977043	789624	5	153,84,163,136,2175,	0,15787,16516,20317,27610,
#Partially deleted in new
chr11	74949260	74977156	chr11:74949260-74977156	1	+	74949285	74977043	789624	4	139,84,89,300,	0,15773,20350,27596,
#Partially deleted in new
chr11	74949263	74977348	chr11:74949263-74977348	1	+	74965100	74977043	789624	4	136,84,60,492,	0,15770,20376,27593,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	74949264	74977087	chr11:74949264-74977087	0	+	74949285	74977043	789624	6	135,93,84,161,135,231,	0,14330,15769,16498,20300,27592,
#Partially deleted in new
chr11	74949270	74965169	chr11:74949270-74965169	0	+	74949270	74949270	8553170	2	129,136,	0,15763,
#Partially deleted in new
chr11	74949277	74977617	chr11:74949277-74977617	0	+	74949277	74949277	8553170	2	69,508,	0,27832,
#Partially deleted in new
chr11	74949278	74977056	chr11:74949278-74977056	0	+	74949278	74949278	8553170	2	121,200,	0,27578,
#Partially deleted in new
chr11	74949523	74969691	chr11:74949523-74969691	0	+	74949523	74969691	789624	4	126,84,161,127,	0,15510,16239,20041,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	74968188	74968292	chr11:74968188-74968292	3	-	74968188	74968188	8553170	1	104,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	74988133	75010907	chr11:74988133-75010907	3	+	74989060	75006492	789624	3	1021,212,5495,	0,6375,17279,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	74988278	75007084	chr11:74988278-75007084	1	+	74989060	75006492	789624	4	447,137,212,1672,	0,739,6230,17134,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	74988697	75018893	chr11:74988697-75018893	1	+	74989060	75005624	789624	4	28,137,213,203,	0,320,16715,29993,
#Deleted in new
chr11	74988924	74990163	chr11:74988924-74990163	1	+	74989060	74990045	789624	2	230,201,	0,1038,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	74988933	75006834	chr11:74988933-75006834	1	+	74989060	75005624	789624	2	221,1422,	0,16479,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	74988942	75005469	chr11:74988942-75005469	1	+	74989060	75005425	789624	4	212,212,101,57,	0,5566,15362,16470,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	74988943	74995043	chr11:74988943-74995043	1	+	74989060	74994927	789624	2	211,535,	0,5565,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	75069242	75081023	chr11:75069242-75081023	3	-	75069242	75069242	8553170	2	2910,3748,	0,8033,
#Partially deleted in new
chr11	75070511	75096964	chr11:75070511-75096964	0	-	75070511	75070511	8553170	3	1641,152,137,	0,19701,26316,
#Deleted in new
chr11	75071147	75072052	chr11:75071147-75072052	7	-	75071147	75071147	16724991	1	905,	0,
#Deleted in new
chr11	75079264	75080131	chr11:75079264-75080131	7	-	75079264	75079264	16724991	1	867,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	75081752	75096876	chr11:75081752-75096876	1	-	75088750	75089713	789624	2	8612,49,	0,15075,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	75081752	75096876	chr11:75081752-75096876	1	-	75088750	75089713	789624	3	8612,134,49,	0,14336,15075,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	75081752	75096876	chr11:75081752-75096876	1	-	75088750	75089713	789624	3	8612,72,49,	0,14336,15075,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	75081752	75096876	chr11:75081752-75096876	3	-	75088750	75089713	789624	4	8022,152,134,49,	0,8460,14336,15075,
#Deleted in new
chr11	75088712	75089754	chr11:75088712-75089754	1	-	75088750	75089713	789624	1	1042,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	75099171	75140148	chr11:75099171-75140148	3	-	75099171	75099171	8553170	4	347,38,111,64,	0,671,34647,40913,
#Partially deleted in new
chr11	75100562	75188233	chr11:75100562-75188233	0	+	75100562	75100562	8553170	3	293,191,98,	0,71816,87573,
#Partially deleted in new
chr11	75100590	75165830	chr11:75100590-75165830	0	+	75162704	75165830	789624	4	265,131,138,44,	0,62064,63372,65196,
#Partially deleted in new
chr11	75131137	75131880	chr11:75131137-75131880	7	-	75131137	75131137	16724991	1	743,	0,
#Partially deleted in new
chr11	75150986	75206549	chr11:75150986-75206549	3	+	75151381	75204580	789624	14	411,131,138,163,234,99,191,103,358,166,164,65,121,2150,	0,11668,12976,14800,18186,18679,21392,37149,42231,45527,49237,51914,52320,53413,
#Partially deleted in new
chr11	75151060	75204991	chr11:75151060-75204991	1	+	75165849	75204580	789624	12	337,163,234,99,191,103,358,166,164,65,121,592,	0,14726,18112,18605,21318,37075,42157,45453,49163,51840,52246,53339,
#Partially deleted in new
chr11	75151069	75203310	chr11:75151069-75203310	0	+	75151069	75151069	8553170	7	328,191,103,358,166,164,410,	0,21309,37066,42148,45444,49154,51831,
#Partially deleted in new
chr11	75151078	75162923	chr11:75151078-75162923	0	+	75151078	75151078	8553170	2	319,269,	0,11576,
#Partially deleted in new
chr11	75151114	75204736	chr11:75151114-75204736	1	+	75151381	75204580	789624	11	283,234,99,191,103,358,166,164,65,121,337,	0,18058,18551,21264,37021,42103,45399,49109,51786,52192,53285,
#Partially deleted in new
chr11	75151212	75206102	chr11:75151212-75206102	1	+	75165849	75204580	789624	10	185,163,191,103,358,166,164,65,121,1703,	0,14574,21166,36923,42005,45301,49011,51688,52094,53187,
#Partially deleted in new
chr11	75151787	75164012	chr11:75151787-75164012	0	+	75162704	75164012	789624	3	43,131,50,	0,10867,12175,
#Partially deleted in new
chr11	75152324	75164012	chr11:75152324-75164012	0	+	75162704	75164012	789624	3	192,131,50,	0,10330,11638,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	75157070	75169241	chr11:75157070-75169241	0	+	75162704	75169241	789624	5	45,131,138,163,69,	0,5584,6892,8716,12102,
#Partially deleted in new
chr11	75159779	75164012	chr11:75159779-75164012	0	+	75162704	75164012	789624	3	93,131,50,	0,2875,4183,
#Partially deleted in new
chr11	75159783	75165948	chr11:75159783-75165948	0	+	75162704	75165948	789624	4	146,131,138,162,	0,2871,4179,6003,
#Partially deleted in new
chr11	75159787	75204717	chr11:75159787-75204717	1	+	75162704	75204580	789624	14	117,131,138,163,234,99,191,103,358,166,164,65,121,318,	0,2867,4175,5999,9385,9878,12591,28348,33430,36726,40436,43113,43519,44612,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	75165873	75170004	chr11:75165873-75170004	0	+	75165873	75169799	789624	3	76,234,339,	0,3299,3792,
#Partially deleted in new
chr11	75196253	75203408	chr11:75196253-75203408	0	+	75196253	75196253	8553170	4	426,164,65,102,	0,3970,6647,7053,
#Partially deleted in new
chr11	75196274	75200400	chr11:75196274-75200400	0	+	75196274	75196274	8553170	2	405,177,	0,3949,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	75199553	75206400	chr11:75199553-75206400	0	+	75199553	75199553	8553170	2	3874,2001,	0,4846,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	75203380	75206254	chr11:75203380-75206254	0	+	75203380	75203380	8553170	1	2874,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	75208053	75241173	chr11:75208053-75241173	3	-	75208053	75208053	8553170	4	80,46,201,168,	0,2308,2855,32952,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	75210838	75241047	chr11:75210838-75241047	1	-	75210838	75210838	8553170	4	271,42,20,42,	0,4370,4675,30167,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	75210848	75215485	chr11:75210848-75215485	0	-	75210848	75210848	8553170	2	261,277,	0,4360,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	75228321	75228657	chr11:75228321-75228657	7	-	75228321	75228321	16724991	1	336,	0,
#Deleted in new
chr11	75240904	75243697	chr11:75240904-75243697	3	+	75241049	75242198	789624	1	2793,	0,
#Deleted in new
chr11	75260126	75261025	chr11:75260126-75261025	3	+	75260126	75260126	8553170	2	236,270,	0,629,
#Deleted in new
chr11	75260128	75262466	chr11:75260128-75262466	3	-	75260128	75260128	8553170	1	2338,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr11	75264181	75351705	chr11:75264181-75351705	3	-	75266162	75351607	0	16	2093,52,71,24,84,138,73,85,136,68,60,197,45,61,31,118,	0,3470,4707,7519,8713,9892,12657,13182,14427,16893,17780,19105,20053,23133,25827,87406,
#Partially deleted in new
chr11	75264288	75265170	chr11:75264288-75265170	3	+	75264288	75264288	8553170	2	156,60,	0,822,
#Partially deleted in new
chr11	75265598	75351705	chr11:75265598-75351705	1	-	75266162	75351607	0	15	676,52,71,84,138,73,85,136,68,60,197,45,61,31,118,	0,2053,3290,7296,8475,11240,11765,13010,15476,16363,17688,18636,21716,24410,85989,
#Partially deleted in new
chr11	75266115	75278699	chr11:75266115-75278699	0	-	75266230	75278699	789624	7	159,71,84,138,73,85,91,	0,2773,6779,7958,10723,11248,12493,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	75270929	75274938	chr11:75270929-75274938	0	-	75270929	75270929	8553170	3	795,84,865,	0,1965,3144,
#Partially deleted in new
chr11	75272785	75276911	chr11:75272785-75276911	0	-	75272785	75272785	8553170	3	193,138,73,	0,1288,4053,
#Partially deleted in new
chr11	75274199	75306709	chr11:75274199-75306709	0	-	75274199	75306557	789624	11	12,73,85,136,68,60,197,45,61,31,157,	0,2639,3164,4409,6875,7762,9087,10035,13115,15809,32353,
#Partially deleted in new
chr11	75278676	75312155	chr11:75278676-75312155	0	-	75283474	75312155	789624	7	68,68,60,197,45,61,94,	0,2398,3285,4610,5558,8638,33385,
#Partially deleted in new
chr11	75278710	75312124	chr11:75278710-75312124	0	-	75284254	75312124	789624	8	34,68,60,197,45,61,31,63,	0,2364,3251,4576,5524,8604,11298,33351,
#Partially deleted in new
chr11	75278715	75303670	chr11:75278715-75303670	0	-	75283474	75303670	789624	8	29,68,60,197,45,61,31,72,	0,2359,3246,4571,5519,8599,11293,24883,
#Deleted in new
chr11	75281005	75282132	chr11:75281005-75282132	0	-	75281005	75281005	8553170	2	137,171,	0,956,
#Partially deleted in new
chr11	75281613	75284313	chr11:75281613-75284313	0	-	75281613	75281613	8553170	3	408,197,79,	0,1673,2621,
#Partially deleted in new
chr11	75281877	75351660	chr11:75281877-75351660	0	-	75281877	75281877	8553170	6	144,197,45,61,31,73,	0,1409,2357,5437,8131,69710,
#Deleted in new
chr11	75335091	75335186	chr11:75335091-75335186	3	-	75335091	75335091	5263520	1	95,	0,
#Partially deleted in new
chr11	75399485	75406913	chr11:75399485-75406913	1	+	75399547	75404865	0	7	92,131,94,95,188,197,1300,	0,1208,2154,2866,4534,5186,6128,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	75399514	75404855	chr11:75399514-75404855	0	+	75399514	75399514	8553170	5	63,131,807,188,184,	0,1179,2125,4505,5157,
#Partially deleted in new
chr11	75399517	75405692	chr11:75399517-75405692	0	+	75399547	75404780	789624	5	60,131,94,109,79,	0,1176,2122,5242,6096,
#Partially deleted in new
chr11	75399518	75403945	chr11:75399518-75403945	1	+	75399547	75402450	789624	4	59,131,94,1594,	0,1175,2121,2833,
#Partially deleted in new
chr11	75399518	75405692	chr11:75399518-75405692	0	+	75399547	75401660	789624	7	59,84,94,95,188,197,79,	0,1175,2121,2833,4501,5153,6095,
#Partially deleted in new
chr11	75399519	75405884	chr11:75399519-75405884	0	+	75404047	75404822	789624	6	58,94,95,188,197,271,	0,2120,2832,4500,5152,6094,
#Partially deleted in new
chr11	75399529	75405688	chr11:75399529-75405688	1	+	75399547	75404865	0	7	48,131,94,143,188,197,106,	0,1164,2110,2774,4490,5142,6053,
#Partially deleted in new
chr11	75399529	75405692	chr11:75399529-75405692	0	+	75399547	75404112	789624	6	48,131,94,188,197,79,	0,1164,2110,4490,5142,6084,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	75399530	75422280	chr11:75399530-75422280	3	+	75399547	75404865	0	7	47,131,94,95,188,197,554,	0,1163,2109,2821,4489,5141,22196,
#Partially deleted in new
chr11	75399530	75405680	chr11:75399530-75405680	1	+	75399547	75404865	789624	6	47,131,94,28,197,67,	0,1163,2109,2821,5141,6083,
#Partially deleted in new
chr11	75399536	75404868	chr11:75399536-75404868	1	+	75399547	75404865	789624	6	41,131,86,67,188,197,	0,1157,2103,2843,4483,5135,
#Partially deleted in new
chr11	75399541	75404109	chr11:75399541-75404109	0	+	75399547	75404109	789624	5	36,131,66,67,90,	0,1152,2098,2838,4478,
#Partially deleted in new
chr11	75399542	75404994	chr11:75399542-75404994	1	+	75399547	75404865	0	6	35,131,94,95,188,323,	0,1151,2097,2809,4477,5129,
#Partially deleted in new
chr11	75399556	75405692	chr11:75399556-75405692	0	+	75399556	75404120	789624	7	21,131,94,95,154,197,79,	0,1137,2083,2795,4497,5115,6057,
#Partially deleted in new
chr11	75399669	75404730	chr11:75399669-75404730	0	+	75399669	75399669	8553170	5	171,131,94,95,59,	0,1024,1970,2682,5002,
#Partially deleted in new
chr11	75399698	75401727	chr11:75399698-75401727	0	+	75399698	75399698	8553170	3	168,131,88,	0,995,1941,
#Deleted in new
chr11	75400390	75400538	chr11:75400390-75400538	3	+	75400390	75400390	789624	1	148,	0,
#Partially deleted in new
chr11	75400403	75404156	chr11:75400403-75404156	0	+	75404047	75404156	789624	5	182,131,94,95,137,	0,290,1236,1948,3616,
#Partially deleted in new
chr11	75400691	75405692	chr11:75400691-75405692	0	+	75400691	75404163	789624	4	86,59,197,79,	0,3457,3980,4922,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	75400691	75405657	chr11:75400691-75405657	0	+	75400691	75404865	789624	3	133,188,986,	0,3328,3980,
#Partially deleted in new
chr11	75400694	75405628	chr11:75400694-75405628	0	+	75400694	75404723	789624	5	130,94,95,197,15,	0,945,1657,3977,4919,
#Deleted in new
chr11	75404420	75404566	chr11:75404420-75404566	3	+	75404420	75404420	789624	1	146,	0,
#Partially deleted in new
chr11	75422393	75430191	chr11:75422393-75430191	1	-	75422579	75429969	789624	6	375,189,189,119,185,443,	0,1298,2999,4126,6048,7355,
#Partially deleted in new
chr11	75422395	75430629	chr11:75422395-75430629	3	-	75422579	75430629	789624	6	373,189,189,119,185,881,	0,1296,2997,4124,6046,7353,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	75422400	75424897	chr11:75422400-75424897	0	-	75422400	75422400	8553170	1	2497,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	75422420	75430062	chr11:75422420-75430062	0	-	75422420	75422420	8553170	5	348,189,1246,209,314,	0,1271,2972,6021,7328,
#Partially deleted in new
chr11	75425505	75426839	chr11:75425505-75426839	0	-	75425505	75425505	8553170	2	76,357,	0,977,
#Partially deleted in new
chr11	75434639	75525903	chr11:75434639-75525903	3	-	75435506	75477735	789624	17	1016,113,83,148,158,219,151,83,146,94,99,60,94,104,177,84,694,	0,2296,5239,6523,7006,7723,8496,9773,14337,14877,15245,22117,23053,28146,42979,55597,90570,
#Partially deleted in new
chr11	75434639	75452331	chr11:75434639-75452331	1	-	75435506	75449944	789624	13	1016,113,83,148,158,219,151,83,146,94,99,841,999,	0,2296,5239,6523,7006,7723,8496,9773,14337,14877,15245,15753,16693,
#Partially deleted in new
chr11	75434639	75479403	chr11:75434639-75479403	0	-	75455321	75477735	789624	18	1016,113,83,148,158,219,151,83,146,94,99,155,151,60,94,104,177,160,	0,2296,5239,6523,7006,7723,8496,9773,14337,14877,15245,18176,20564,22117,23053,28146,42979,44604,
#Partially deleted in new
chr11	75434639	75490751	chr11:75434639-75490751	1	-	75435506	75477735	789624	18	1016,113,83,148,158,219,151,83,146,94,99,60,94,104,177,245,84,148,	0,2296,5239,6523,7006,7723,8496,9773,14337,14877,15245,22117,23053,28146,42979,44604,55597,55964,
#Partially deleted in new
chr11	75434639	75490289	chr11:75434639-75490289	1	-	75435506	75477735	789624	12	1016,113,83,148,158,219,151,83,146,94,177,53,	0,2296,5239,6523,7006,7723,8496,9773,14337,14877,42979,55597,
#Partially deleted in new
chr11	75434640	75477851	chr11:75434640-75477851	1	-	75455321	75477735	789624	17	1015,113,83,148,158,219,151,83,146,94,99,155,151,60,94,104,233,	0,2295,5238,6522,7005,7722,8495,9772,14336,14876,15244,18175,20563,22116,23052,28145,42978,
#Partially deleted in new
chr11	75434640	75449940	chr11:75434640-75449940	1	-	75435506	75444474	789624	12	1015,113,83,148,158,219,151,83,158,146,94,56,	0,2295,5238,6522,7005,7722,8495,9772,13851,14336,14876,15244,
#Deleted in new
chr11	75434938	75438848	chr11:75434938-75438848	0	-	75434938	75434938	8553170	2	720,1913,	0,1997,
#Partially deleted in new
chr11	75435564	75441722	chr11:75435564-75441722	0	-	75435564	75441722	789624	6	91,113,15,83,148,77,	0,1371,3775,4314,5598,6081,
#Deleted in new
chr11	75441689	75442697	chr11:75441689-75442697	0	-	75441689	75441689	8553170	2	114,335,	0,673,
#Partially deleted in new
chr11	75442763	75457786	chr11:75442763-75457786	0	-	75442763	75442763	8553170	6	523,83,146,94,60,94,	0,1649,6213,6753,13993,14929,
#Partially deleted in new
chr11	75443062	75449940	chr11:75443062-75449940	0	-	75443062	75443062	8553170	5	224,83,146,94,56,	0,1350,5914,6454,6822,
#Partially deleted in new
chr11	75456541	75479317	chr11:75456541-75479317	0	-	75456541	75456541	8553170	5	275,94,104,177,74,	0,1151,6244,21077,22702,
#Partially deleted in new
chr11	75462785	75525424	chr11:75462785-75525424	0	-	75462785	75477735	789624	5	104,177,245,84,215,	0,14833,16458,27451,62424,
#Deleted in new
chr11	75506936	75508391	chr11:75506936-75508391	3	-	75506936	75506936	8553170	2	161,225,	0,1230,
#Partially deleted in new
chr11	75515974	75525256	chr11:75515974-75525256	0	-	75515974	75515974	8553170	2	192,47,	0,9235,
#Deleted in new
chr11	75525283	75525864	chr11:75525283-75525864	0	-	75525283	75525283	8553170	2	290,76,	0,505,
#Partially deleted in new
chr11	75562055	75572783	chr11:75562055-75572783	3	+	75566349	75572083	789624	6	264,44,656,99,233,1003,	0,1671,4260,6675,6883,9725,
#Partially deleted in new
chr11	75562085	75572783	chr11:75562085-75572783	1	+	75566349	75572083	789624	5	234,656,99,233,1003,	0,4230,6645,6853,9695,
#Deleted in new
chr11	75562136	75566681	chr11:75562136-75566681	0	+	75566349	75566681	789624	3	183,76,215,	0,4179,4330,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	75562216	75572542	chr11:75562216-75572542	0	+	75566349	75569192	8553170	6	103,44,656,99,1859,762,	0,1510,4099,6514,6722,9564,
#Partially deleted in new
chr11	75562242	75568966	chr11:75562242-75568966	0	+	75566349	75568966	789624	4	99,656,99,28,	0,4073,6488,6696,
#Deleted in new
chr11	75562252	75566918	chr11:75562252-75566918	0	+	75566349	75566918	789624	3	67,151,311,	0,4063,4355,
#Deleted in new
chr11	75562252	75566849	chr11:75562252-75566849	0	+	75566349	75566849	789624	2	126,534,	0,4063,
#Partially deleted in new
chr11	75562252	75569430	chr11:75562252-75569430	1	+	75566349	75569192	789624	5	67,44,656,99,492,	0,1474,4063,6478,6686,
#Partially deleted in new
chr11	75562345	75569104	chr11:75562345-75569104	0	+	75566349	75569104	789624	5	33,44,656,99,166,	0,1381,3970,6385,6593,
#Partially deleted in new
chr11	75562369	75572782	chr11:75562369-75572782	1	+	75566349	75572083	789624	5	1401,656,99,233,1002,	0,3946,6361,6569,9411,
#Deleted in new
chr11	75562826	75566844	chr11:75562826-75566844	0	+	75566349	75566844	789624	2	58,529,	0,3489,
#Deleted in new
chr11	75562832	75566801	chr11:75562832-75566801	0	+	75566349	75566801	789624	3	52,44,486,	0,894,3483,
#Partially deleted in new
chr11	75562863	75568960	chr11:75562863-75568960	0	+	75566349	75568960	789624	5	153,44,656,99,22,	0,863,3452,5867,6075,
#Deleted in new
chr11	75563421	75566959	chr11:75563421-75566959	0	+	75566349	75566959	789624	3	85,44,644,	0,305,2894,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	75567781	75572782	chr11:75567781-75572782	1	+	75568759	75572083	789624	3	1048,233,1002,	0,1157,3999,
#Deleted in new
chr11	75571913	75572783	chr11:75571913-75572783	0	+	75571913	75572083	789624	2	486,233,	0,637,
#Partially deleted in new
chr11	75583195	75594665	chr11:75583195-75594665	3	+	75583195	75583195	789624	2	86,565,	0,10905,
#Partially deleted in new
chr11	75586917	75669120	chr11:75586917-75669120	3	-	75587058	75668369	789624	4	1267,197,214,1656,	0,18890,21191,80547,
#Partially deleted in new
chr11	75586918	75668607	chr11:75586918-75668607	1	-	75587058	75608240	789624	4	1266,197,214,78,	0,18889,21190,81611,
#Partially deleted in new
chr11	75587989	75599036	chr11:75587989-75599036	0	-	75587989	75587989	8553170	2	195,151,	0,10896,
#Partially deleted in new
chr11	75596143	75597270	chr11:75596143-75597270	3	-	75596143	75596143	8553170	2	458,88,	0,1039,
#Partially deleted in new
chr11	75602859	75668434	chr11:75602859-75668434	1	-	75605803	75668369	789624	3	3145,214,970,	0,5249,64605,
#Partially deleted in new
chr11	75635882	75638587	chr11:75635882-75638587	3	-	75635882	75635882	8553170	2	311,79,	0,2626,
#Deleted in new
chr11	75642599	75642889	chr11:75642599-75642889	7	+	75642599	75642599	16724991	1	290,	0,
#Partially deleted in new
chr11	75717818	75731615	chr11:75717818-75731615	3	+	75717888	75731286	789624	6	161,179,205,175,200,484,	0,2173,9616,10151,10971,13313,
#Partially deleted in new
chr11	75717888	75731286	chr11:75717888-75731286	0	+	75717888	75728349	789624	5	91,179,205,1020,155,	0,2103,9546,10081,13243,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	75719373	75732958	chr11:75719373-75732958	1	+	75720146	75731286	789624	5	797,205,175,200,1827,	0,8061,8596,9416,11758,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	75731002	75732958	chr11:75731002-75732958	0	+	75731002	75731002	8553170	1	1956,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	75742128	75742426	chr11:75742128-75742426	3	+	75742128	75742128	8553170	1	298,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	75758454	75768647	chr11:75758454-75768647	3	-	75758454	75758454	789624	4	189,410,751,154,	0,3680,5788,10039,
#Partially deleted in new
chr11	75759511	75797276	chr11:75759511-75797276	0	+	75790210	75797276	789624	6	115,129,108,71,205,119,	0,25106,30676,31149,36816,37646,
#Partially deleted in new
chr11	75768530	75796508	chr11:75768530-75796508	0	+	75790210	75796508	789624	5	129,129,108,71,181,	0,16087,21657,22130,27797,
#Partially deleted in new
chr11	75768731	75801534	chr11:75768731-75801534	3	+	75768991	75800508	789624	8	381,129,108,71,205,175,203,1181,	0,15886,21456,21929,27596,28426,29495,31622,
#Partially deleted in new
chr11	75768732	75801535	chr11:75768732-75801535	1	+	75768991	75800508	789624	7	380,108,71,205,175,203,1182,	0,21455,21928,27595,28425,29494,31621,
#Partially deleted in new
chr11	75768798	75774042	chr11:75768798-75774042	0	+	75768798	75768798	8553170	2	314,321,	0,4923,
#Partially deleted in new
chr11	75769000	75800364	chr11:75769000-75800364	0	+	75769000	75800364	789624	7	112,108,71,205,175,203,11,	0,21187,21660,27327,28157,29226,31353,
#Deleted in new
chr11	75775903	75776929	chr11:75775903-75776929	3	+	75775903	75775903	8553170	2	137,705,	0,321,
#Partially deleted in new
chr11	75784395	75796511	chr11:75784395-75796511	0	+	75790210	75796511	789624	5	92,129,108,71,184,	0,222,5792,6265,11932,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	75792158	75801527	chr11:75792158-75801527	0	+	75792158	75792158	8553170	4	4374,175,203,1174,	0,4999,6068,8195,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	75795136	75800632	chr11:75795136-75800632	0	+	75795136	75795136	8553170	3	2196,203,279,	0,3090,5217,
#Partially deleted in new
chr11	75800876	75803415	chr11:75800876-75803415	3	-	75800876	75800876	8553170	3	423,206,129,	0,795,2410,
#Partially deleted in new
chr11	75803430	75814576	chr11:75803430-75814576	3	-	75803430	75803430	8553170	4	87,113,259,114,	0,7993,10172,11032,
#Partially deleted in new
chr11	75803461	75814573	chr11:75803461-75814573	1	-	75803461	75803461	8553170	4	56,146,259,111,	0,7962,10141,11001,
#Partially deleted in new
chr11	75803518	75811568	chr11:75803518-75811568	0	-	75803518	75803518	8553170	2	207,145,	0,7905,
#Partially deleted in new
chr11	75809272	75814555	chr11:75809272-75814555	1	-	75809272	75809272	8553170	4	102,113,259,93,	0,2151,4330,5190,
#Partially deleted in new
chr11	75813513	75814797	chr11:75813513-75814797	1	-	75813513	75813513	789624	2	348,335,	0,949,
#Deleted in new
chr11	75814486	75815406	chr11:75814486-75815406	0	-	75814486	75814486	8553170	2	143,301,	0,619,
#Partially deleted in new
chr11	75815166	76143195	chr11:75815166-76143195	3	+	75815407	76141413	789624	15	358,118,35,162,75,86,106,127,85,88,61,166,79,92,2485,	0,36716,46579,64712,73662,96787,146277,168220,188838,192367,193640,201648,250543,300757,325544,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	75835214	75835323	chr11:75835214-75835323	3	-	75835214	75835214	8553170	1	109,	0,
#Partially deleted in new
chr11	75837543	75837645	chr11:75837543-75837645	3	-	75837543	75837543	8553170	1	102,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr11	75838943	76141794	chr11:75838943-76141794	1	+	75879911	76141413	789624	15	99,118,35,162,75,86,106,127,85,88,61,166,79,92,1084,	0,12939,22802,40935,49885,73010,122500,144443,165061,168590,169863,177871,226766,276980,301767,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	75878403	75961549	chr11:75878403-75961549	0	+	75879911	75961549	789624	5	82,162,75,86,106,	0,1475,10425,33550,83040,
#Partially deleted in new
chr11	75911203	75911628	chr11:75911203-75911628	7	-	75911203	75911203	16724991	1	425,	0,
#Partially deleted in new
chr11	75911978	75916784	chr11:75911978-75916784	0	+	75911978	75911978	8553170	2	61,652,	0,4154,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	75914200	75915213	chr11:75914200-75915213	3	+	75914200	75914200	8553170	2	388,83,	0,930,
#Partially deleted in new
chr11	75930859	76141500	chr11:75930859-76141500	1	+	76016870	76141413	789624	11	53,106,127,85,88,61,176,166,79,92,790,	0,30584,52527,73145,76674,77947,82067,85955,134850,185064,209851,
#Partially deleted in new
chr11	75934935	75935039	chr11:75934935-75935039	7	+	75934935	75934935	16724991	1	104,	0,
#Deleted in new
chr11	75942128	75942435	chr11:75942128-75942435	7	-	75942128	75942128	16724991	1	307,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	75961462	75983824	chr11:75961462-75983824	0	+	75961462	75961462	8553170	2	87,438,	0,21924,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	75979525	76142651	chr11:75979525-76142651	1	+	76016870	76141413	789624	9	513,127,85,88,61,166,79,92,1941,	0,3861,24479,28008,29281,37289,86184,136398,161185,
#Partially deleted in new
chr11	75980059	76141783	chr11:75980059-76141783	1	+	76016870	76141413	789624	9	60,127,85,88,61,166,79,92,1073,	0,3327,23945,27474,28747,36755,85650,135864,160651,
#Partially deleted in new
chr11	76115899	76141660	chr11:76115899-76141660	0	+	76115899	76137350	789624	3	116,259,950,	0,21294,24811,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	76137314	76137731	chr11:76137314-76137731	3	-	76137314	76137314	8553170	2	148,137,	0,280,
#Partially deleted in new
chr11	76186324	76206532	chr11:76186324-76206532	3	-	76187064	76206407	789624	5	915,293,278,236,208,	0,5239,8242,10158,20000,
#Partially deleted in new
chr11	76187064	76206407	chr11:76187064-76206407	1	-	76187064	76206407	789624	6	175,209,1,85,236,83,	0,4499,4713,7695,9418,19260,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	76190724	76195071	chr11:76190724-76195071	3	+	76190724	76190724	8553170	2	182,431,	0,3916,
#Partially deleted in new
chr11	76206391	76210736	chr11:76206391-76210736	0	-	76206391	76206407	8553170	3	107,81,265,	0,483,4080,
#Partially deleted in new
chr11	76206421	76210730	chr11:76206421-76210730	0	-	76206421	76206421	8553170	2	77,384,	0,3925,
#Partially deleted in new
chr11	76210955	76216025	chr11:76210955-76216025	3	-	76210955	76210955	8553170	3	294,55,39,	0,4282,5031,
#Partially deleted in new
chr11	76349955	76380942	chr11:76349955-76380942	3	-	76350863	76380836	789624	5	2839,37,108,121,195,	0,5662,11000,15896,30792,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	76349955	76359573	chr11:76349955-76359573	0	-	76349955	76349955	8553170	2	2839,3956,	0,5662,
#Partially deleted in new
chr11	76352624	76361369	chr11:76352624-76361369	0	-	76352624	76352624	8553170	3	170,37,414,	0,2993,8331,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	76381312	76414619	chr11:76381312-76414619	0	+	76381312	76381312	789624	4	62,262,146,3758,	0,22347,27164,29549,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	76381315	76383777	chr11:76381315-76383777	1	+	76381828	76382461	789624	1	2462,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	76381324	76408136	chr11:76381324-76408136	1	+	76381828	76404042	789624	2	886,4477,	0,22335,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	76381804	76403870	chr11:76381804-76403870	1	+	76381828	76403758	789624	2	489,211,	0,21855,
#Partially deleted in new
chr11	76381811	76395099	chr11:76381811-76395099	2	+	76381811	76381811	8553170	2	482,126,	0,13162,
#Partially deleted in new
chr11	76382784	76411306	chr11:76382784-76411306	0	+	76382784	76382784	8553170	3	120,146,445,	0,25692,28077,
#Deleted in new
chr11	76389647	76390128	chr11:76389647-76390128	3	+	76389647	76389647	8553170	1	481,	0,
#Deleted in new
chr11	76392195	76392905	chr11:76392195-76392905	3	+	76392195	76392195	8553170	1	710,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	76404139	76404252	chr11:76404139-76404252	3	-	76404139	76404139	8553170	1	113,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	76441337	76444574	chr11:76441337-76444574	0	-	76441337	76441337	8553170	2	302,297,	0,2940,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	76441353	76444656	chr11:76441353-76444656	3	-	76441353	76441353	8553170	2	286,452,	0,2851,
#Partially deleted in new
chr11	76444922	76497231	chr11:76444922-76497231	0	+	76444922	76444922	8553170	10	206,109,100,75,42,176,153,260,277,1017,	0,1977,6935,8391,9826,13260,15010,18898,27641,51292,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	76445021	76453931	chr11:76445021-76453931	1	+	76446938	76453392	0	4	107,109,100,618,	0,1878,6836,8292,
#Partially deleted in new
chr11	76445024	76551542	chr11:76445024-76551542	3	+	76446938	76550146	0	21	104,109,100,75,176,150,260,277,255,150,171,137,174,199,165,156,42,152,564,501,1591,	0,1875,6833,8289,13158,14911,18796,27539,51190,68361,71117,78130,81437,83243,90870,92770,94574,97191,99234,100772,104927,
#Partially deleted in new
chr11	76445024	76550343	chr11:76445024-76550343	1	+	76446938	76550146	789624	19	104,109,100,75,176,153,260,277,150,171,137,174,199,165,156,152,564,501,392,	0,1875,6833,8289,13158,14908,18796,27539,68361,71117,78130,81437,83243,90870,92770,97191,99234,100772,104927,
#Partially deleted in new
chr11	76445041	76458247	chr11:76445041-76458247	0	+	76445041	76445041	8553170	5	87,109,100,75,87,	0,1858,6816,8272,13119,
#Partially deleted in new
chr11	76445043	76516249	chr11:76445043-76516249	0	+	76446938	76516249	789624	4	85,109,150,108,	0,1856,68342,71098,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	76445046	76461015	chr11:76445046-76461015	0	+	76445046	76445046	8553170	5	82,109,100,75,2833,	0,1853,6811,8267,13136,
#Partially deleted in new
chr11	76446899	76550209	chr11:76446899-76550209	1	+	76446938	76550146	0	21	109,100,75,42,176,153,260,277,255,150,171,137,174,199,165,156,42,152,564,501,258,	0,4958,6414,7849,11283,13033,16921,25664,49315,66486,69242,76255,79562,81368,88995,90895,92699,95316,97359,98897,103052,
#Partially deleted in new
chr11	76446899	76550511	chr11:76446899-76550511	1	+	76446938	76550146	0	20	109,100,75,42,176,153,260,277,255,150,171,137,174,199,165,156,152,564,501,560,	0,4958,6414,7849,11283,13033,16921,25664,49315,66486,69242,76255,79562,81368,88995,90895,95316,97359,98897,103052,
#Partially deleted in new
chr11	76446899	76550209	chr11:76446899-76550209	1	+	76446938	76550146	0	20	109,100,75,176,153,260,277,255,150,171,137,174,199,165,156,42,152,564,501,258,	0,4958,6414,11283,13033,16921,25664,49315,66486,69242,76255,79562,81368,88995,90895,92699,95316,97359,98897,103052,
#Partially deleted in new
chr11	76446899	76550209	chr11:76446899-76550209	1	+	76446938	76550146	0	18	109,100,75,42,176,150,260,277,255,150,171,137,174,199,200,564,501,258,	0,4958,6414,7849,11283,13036,16921,25664,49315,66486,69242,76255,79562,81368,95268,97359,98897,103052,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr11	76446938	76553025	chr11:76446938-76553025	1	+	76446938	76550146	0	20	70,100,75,176,150,260,277,255,150,171,137,174,199,165,156,42,152,564,501,3074,	0,4919,6375,11244,12997,16882,25625,49276,66447,69203,76216,79523,81329,88956,90856,92660,95277,97320,98858,103013,
#Partially deleted in new
chr11	76513396	76516842	chr11:76513396-76516842	0	+	76513396	76516326	789624	2	139,701,	0,2745,
#Partially deleted in new
chr11	76526461	76544386	chr11:76526461-76544386	0	+	76526461	76544386	789624	4	174,199,152,128,	0,1806,15754,17797,
#Partially deleted in new
chr11	76526478	76544868	chr11:76526478-76544868	0	+	76526478	76526478	8553170	6	157,199,165,156,152,610,	0,1789,9416,11316,15737,17780,
#Partially deleted in new
chr11	76542050	76544483	chr11:76542050-76544483	0	+	76542050	76542050	8553170	2	317,225,	0,2208,
#Partially deleted in new
chr11	76542238	76550363	chr11:76542238-76550363	0	+	76542238	76550146	789624	3	129,564,412,	0,2020,7713,
#Partially deleted in new
chr11	76545947	76550006	chr11:76545947-76550006	0	+	76545947	76550006	789624	3	350,73,55,	0,1080,4004,
#Partially deleted in new
chr11	76591022	76591211	chr11:76591022-76591211	7	+	76591022	76591022	16724991	1	189,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	76607852	76630427	chr11:76607852-76630427	3	-	76607852	76607852	8553170	5	386,653,63,78,233,	0,18720,19886,20551,22342,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	76625461	76626834	chr11:76625461-76626834	3	-	76625461	76625461	8553170	2	569,262,	0,1111,
#Partially deleted in new
chr11	76628095	76630363	chr11:76628095-76630363	0	-	76628095	76628095	8553170	2	386,173,	0,2095,
#Partially deleted in new
chr11	76654168	76656712	chr11:76654168-76656712	3	-	76654168	76654168	8553170	2	387,264,	0,2280,
#Partially deleted in new
chr11	76657055	76663866	chr11:76657055-76663866	3	+	76657055	76657055	8553170	3	101,87,1238,	0,2552,5573,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	76657523	76670747	chr11:76657523-76670747	3	-	76659603	76665954	789624	3	3985,88,134,	0,8347,13090,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	76657524	76670000	chr11:76657524-76670000	1	-	76659603	76665954	789624	3	3984,88,239,	0,8346,12237,
#Partially deleted in new
chr11	76657526	76670747	chr11:76657526-76670747	1	-	76659603	76665954	789624	4	508,1926,88,134,	0,2056,8344,13087,
#Partially deleted in new
chr11	76657569	76665971	chr11:76657569-76665971	0	-	76657569	76657569	8553170	2	465,101,	0,8301,
#Partially deleted in new
chr11	76661034	76670000	chr11:76661034-76670000	0	-	76661034	76665954	789624	3	474,88,239,	0,4836,8727,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	76675078	76703195	chr11:76675078-76703195	3	+	76675078	76675078	8553170	3	108,120,224,	0,12679,27893,
#Partially deleted in new
chr11	76694040	76719801	chr11:76694040-76719801	7	-	76694040	76694040	16724991	13	99,99,175,195,168,148,149,157,152,105,123,114,234,	0,1374,2700,9292,10120,13464,18226,18618,19013,20855,22298,22505,25527,
#Partially deleted in new
chr11	76703273	76704479	chr11:76703273-76704479	4	-	76703273	76703273	16724991	2	254,319,	0,887,
#Partially deleted in new
chr11	76712395	76719608	chr11:76712395-76719608	4	-	76712395	76712395	16724991	2	791,41,	0,7172,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	76759915	76768223	chr11:76759915-76768223	3	-	76759915	76759915	8553170	2	424,114,	0,8194,
#Partially deleted in new
chr11	76782250	76796068	chr11:76782250-76796068	0	+	76795616	76796068	789624	2	183,460,	0,13358,
#Partially deleted in new
chr11	76782312	76798153	chr11:76782312-76798153	3	+	76795616	76796678	789624	2	121,2545,	0,13296,
#Partially deleted in new
chr11	76782580	76783062	chr11:76782580-76783062	3	-	76782580	76782580	789624	2	276,60,	0,422,
#Partially deleted in new
chr11	76782629	76783059	chr11:76782629-76783059	0	-	76782629	76782629	8553170	2	227,69,	0,361,
#Partially deleted in new
chr11	76782639	76783060	chr11:76782639-76783060	0	-	76782639	76782639	8553170	2	217,76,	0,345,
#Partially deleted in new
chr11	76783238	76798154	chr11:76783238-76798154	1	+	76795616	76796678	789624	2	166,2546,	0,12370,
#Partially deleted in new
chr11	76784147	76795932	chr11:76784147-76795932	0	+	76795616	76795932	789624	2	218,324,	0,11461,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	76791751	76798144	chr11:76791751-76798144	1	+	76795616	76796678	789624	2	1018,2536,	0,3857,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	76800363	76804555	chr11:76800363-76804555	3	+	76800363	76800363	8553170	1	4192,	0,
#Partially deleted in new
chr11	76860866	77019767	chr11:76860866-77019767	0	+	76926579	77019767	789624	10	196,111,53,53,82,36,59,102,105,37,	0,65690,98112,115422,124776,129672,137896,154149,155808,158864,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	76860872	77026797	chr11:76860872-77026797	3	+	76860976	77020327	789624	11	207,111,53,53,82,36,59,102,105,46,6524,	0,65684,98106,115416,124770,129666,137890,154143,155802,158858,159401,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	76860920	76994212	chr11:76860920-76994212	0	+	76860920	76860920	8553170	7	159,111,53,53,82,36,57,	0,65636,98058,115368,124722,129618,133235,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	76860923	77016689	chr11:76860923-77016689	0	+	76860976	76926572	789624	11	156,37,111,124,53,82,36,71,59,102,15,	0,7196,65633,98153,115365,124719,129615,133232,137839,154092,155751,
#Partially deleted in new
chr11	76860935	77020827	chr11:76860935-77020827	0	+	76860976	76976299	789624	10	144,111,53,82,36,59,102,105,46,554,	0,65621,115353,124707,129603,137827,154080,155739,158795,159338,
#Partially deleted in new
chr11	76860936	77015261	chr11:76860936-77015261	0	+	76860976	76868232	789624	9	143,148,111,53,53,82,36,59,246,	0,7183,65620,98042,115352,124706,129602,137826,154079,
#Partially deleted in new
chr11	76860938	77020700	chr11:76860938-77020700	1	+	76976306	77020327	789624	11	124,111,124,53,82,36,59,102,105,46,427,	0,65618,98138,115350,124704,129600,137824,154077,155736,158792,159335,
#Partially deleted in new
chr11	76860941	77020528	chr11:76860941-77020528	1	+	76860976	77020327	789624	10	138,53,53,82,36,59,102,105,46,255,	0,98037,115347,124701,129597,137821,154074,155733,158789,159332,
#Partially deleted in new
chr11	76860942	77021545	chr11:76860942-77021545	0	+	76860976	76926572	789624	12	137,37,111,53,53,82,36,59,102,105,46,1272,	0,7177,65614,98036,115346,124700,129596,137820,154073,155732,158788,159331,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	76860949	77022925	chr11:76860949-77022925	0	+	76860976	76959093	789624	11	130,111,124,53,82,36,59,102,105,46,2652,	0,65607,98127,115339,124693,129589,137813,154066,155725,158781,159324,
#Partially deleted in new
chr11	76926556	77015106	chr11:76926556-77015106	0	+	76926556	76926556	8553170	8	111,53,53,82,36,59,46,91,	0,32422,49732,59086,63982,72206,84773,88459,
#Partially deleted in new
chr11	76998553	77020312	chr11:76998553-77020312	0	+	76998553	76998553	8553170	5	268,102,105,46,39,	0,16462,18121,21177,21720,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	77019536	77020600	chr11:77019536-77020600	0	+	77019536	77019536	8553170	2	240,327,	0,737,
#Partially deleted in new
chr11	77034397	77039915	chr11:77034397-77039915	0	+	77039551	77039915	789624	3	81,123,364,	0,2778,5154,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	77034397	77041973	chr11:77034397-77041973	3	+	77039551	77040706	789624	2	81,2422,	0,5154,
#Partially deleted in new
chr11	77066940	77126155	chr11:77066940-77126155	3	+	77084886	77123870	789624	13	154,200,132,209,193,194,78,196,123,197,116,137,2468,	0,17911,26741,45648,47301,48454,49285,51216,52089,53772,54993,55635,56747,
#Partially deleted in new
chr11	77066960	77125618	chr11:77066960-77125618	0	+	77084886	77123870	789624	14	134,200,132,209,193,194,78,196,123,197,116,137,687,549,	0,17891,26721,45628,47281,48434,49265,51196,52069,53752,54973,55615,56727,58109,
#Partially deleted in new
chr11	77066970	77093807	chr11:77066970-77093807	0	+	77084886	77093807	789624	4	124,147,200,126,	0,6020,17881,26711,
#Partially deleted in new
chr11	77066970	77126155	chr11:77066970-77126155	1	+	77084886	77123870	789624	13	124,200,132,209,193,194,78,196,123,197,116,137,2468,	0,17881,26711,45618,47271,48424,49255,51186,52059,53742,54963,55605,56717,
#Partially deleted in new
chr11	77066976	77124054	chr11:77066976-77124054	1	+	77084886	77123870	789624	14	118,73,200,132,209,193,194,78,196,123,197,116,137,367,	0,4633,17875,26705,45612,47265,48418,49249,51180,52053,53736,54957,55599,56711,
#Partially deleted in new
chr11	77066992	77124495	chr11:77066992-77124495	1	+	77084886	77123870	789624	14	102,200,120,132,209,193,194,78,196,123,197,116,137,808,	0,17859,20949,26689,45596,47249,48402,49233,51164,52037,53720,54941,55583,56695,
#Partially deleted in new
chr11	77084964	77112911	chr11:77084964-77112911	0	+	77084964	77084964	8553170	3	87,132,323,	0,8717,27624,
#Deleted in new
chr11	77102839	77103331	chr11:77102839-77103331	3	+	77102839	77103331	789624	1	492,	0,
#Partially deleted in new
chr11	77112597	77124412	chr11:77112597-77124412	0	+	77112597	77123870	8553170	9	200,193,194,196,123,197,116,137,725,	0,1644,2797,5559,6432,8115,9336,9978,11090,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	77119406	77124495	chr11:77119406-77124495	0	+	77119406	77119406	8553170	4	1503,116,137,808,	0,2527,3169,4281,
#Partially deleted in new
chr11	77128263	77215241	chr11:77128263-77215241	1	+	77130634	77214696	0	49	226,64,114,153,185,122,143,114,154,77,120,143,211,136,107,138,159,93,95,85,219,108,210,204,177,90,128,127,120,174,228,171,118,127,284,191,125,158,154,156,106,114,88,107,186,117,84,120,635,	0,2325,14445,19534,27643,28396,28598,29015,30013,31183,31899,32709,33856,34589,37792,44484,46492,47108,49285,50781,51471,52110,53116,53687,54160,54804,56324,61080,61756,62433,63787,66090,69217,70231,71271,73184,74036,74796,75812,77198,77833,79025,80166,80433,82888,83557,84688,85596,86343,
#Partially deleted in new
chr11	77128269	77215238	chr11:77128269-77215238	3	+	77130634	77214696	0	49	220,64,114,153,185,122,143,114,154,77,120,143,211,136,107,138,159,93,95,85,219,108,210,204,177,90,128,127,120,174,228,171,118,127,170,191,125,158,154,156,106,114,88,107,186,111,84,120,632,	0,2319,14439,19528,27637,28390,28592,29009,30007,31177,31893,32703,33850,34583,37786,44478,46486,47102,49279,50775,51465,52104,53110,53681,54154,54798,56318,61074,61750,62427,63781,66084,69211,70225,71379,73178,74030,74790,75806,77192,77827,79019,80160,80427,82882,83551,84682,85590,86337,
#Partially deleted in new
chr11	77128269	77184989	chr11:77128269-77184989	1	+	77130634	77184836	789624	29	220,64,114,153,185,122,143,114,154,77,120,143,211,136,107,138,159,93,95,85,219,108,210,204,177,99,116,64,186,	0,2319,14439,19528,27637,28390,28592,29009,30007,31177,31893,32703,33850,34583,37786,44478,46486,47102,49279,50775,51465,52104,53110,53681,54154,54789,56318,56465,56534,
#Partially deleted in new
chr11	77128301	77214954	chr11:77128301-77214954	1	+	77142723	77214696	0	50	188,64,80,114,153,185,122,143,114,154,77,120,143,211,136,107,138,159,93,95,85,219,108,210,204,177,90,128,127,120,174,228,171,118,127,170,191,125,158,154,156,106,114,88,107,186,117,84,120,348,	0,2287,11099,14407,19496,27605,28358,28560,28977,29975,31145,31861,32671,33818,34551,37754,44446,46454,47070,49247,50743,51433,52072,53078,53649,54122,54766,56286,61042,61718,62395,63749,66052,69179,70193,71347,73146,73998,74758,75774,77160,77795,78987,80128,80395,82850,83519,84650,85558,86305,
#Partially deleted in new
chr11	77174755	77184996	chr11:77174755-77184996	0	+	77174755	77184749	789624	11	159,93,95,85,219,108,210,204,177,90,409,	0,616,2793,4289,4979,5618,6624,7195,7668,8312,9832,
#Partially deleted in new
chr11	77179824	77215238	chr11:77179824-77215238	0	+	77179824	77214696	789624	29	129,108,210,204,177,90,128,127,120,174,228,171,118,127,170,188,125,158,154,156,106,114,88,107,186,117,84,120,632,	0,549,1555,2126,2599,3243,4763,9519,10195,10872,12226,14529,17656,18670,19824,21626,22475,23235,24251,25637,26272,27464,28605,28872,31327,31996,33127,34035,34782,
#Partially deleted in new
chr11	77179824	77215238	chr11:77179824-77215238	0	+	77179824	77179824	8553170	29	129,108,210,204,177,90,128,127,120,174,228,110,171,118,127,170,188,125,158,154,156,106,114,88,107,186,1215,120,632,	0,549,1555,2126,2599,3243,4763,9519,10195,10872,12226,14207,14529,17656,18670,19824,21626,22475,23235,24251,25637,26272,27464,28605,28872,31327,31996,34035,34782,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	77184685	77191187	chr11:77184685-77191187	0	+	77184685	77184685	8553170	4	30,127,120,491,	0,4658,5334,6011,
#Partially deleted in new
chr11	77203185	77215239	chr11:77203185-77215239	0	+	77203185	77203185	8553170	13	32,154,71,106,407,88,660,186,117,47,84,120,633,	0,890,2361,2911,3810,5244,5511,7966,8635,9428,9766,10674,11421,
#Deleted in new
chr11	77210886	77212975	chr11:77210886-77212975	0	+	77210886	77210886	8553170	2	25,431,	0,1658,
#Deleted in new
chr11	77212534	77213918	chr11:77212534-77213918	0	+	77212534	77212534	8553170	2	501,59,	0,1325,
#Partially deleted in new
chr11	77216557	77287418	chr11:77216557-77287418	3	-	77217276	77285137	789624	16	757,53,83,148,155,222,157,83,146,78,94,99,60,94,103,201,	0,11306,12592,16467,27136,28723,41828,51899,52366,53325,54572,54737,59603,62748,68527,70660,
#Partially deleted in new
chr11	77216557	77287418	chr11:77216557-77287418	1	-	77216936	77285137	789624	17	711,15,53,83,148,155,222,157,83,146,78,94,99,60,94,103,201,	0,742,11306,12592,16467,27136,28723,41828,51899,52366,53325,54572,54737,59603,62748,68527,70660,
#Partially deleted in new
chr11	77270919	77301687	chr11:77270919-77301687	0	-	77270919	77270919	8553170	4	304,99,60,83,	0,375,5241,30685,
#Partially deleted in new
chr11	77271355	77301649	chr11:77271355-77301649	0	-	77271355	77271355	8553170	5	38,60,99,332,45,	0,4805,13729,15733,30249,
#Partially deleted in new
chr11	77286922	77301666	chr11:77286922-77301666	0	-	77286922	77286922	8553170	2	498,62,	0,14682,
#Deleted in new
chr11	77313605	77314032	chr11:77313605-77314032	7	+	77313605	77313605	16724991	1	427,	0,
#Partially deleted in new
chr11	77321706	77474062	chr11:77321706-77474062	3	-	77323273	77392520	0	15	1654,138,197,100,118,113,49,64,175,120,38,148,101,211,511,	0,11023,14379,15617,18939,22112,27532,31829,33961,37191,52621,57534,58187,70624,151845,
#Partially deleted in new
chr11	77322016	77412064	chr11:77322016-77412064	1	-	77323136	77392520	789624	15	1138,138,197,100,118,113,49,64,175,120,38,148,101,211,291,	0,10713,14069,15307,18629,21802,27222,31519,33651,36881,52311,57224,57877,70314,89757,
#Partially deleted in new
chr11	77322947	77474060	chr11:77322947-77474060	1	-	77323298	77392520	0	16	413,49,138,197,100,118,113,49,64,175,120,38,148,101,211,509,	0,2380,9782,13138,14376,17698,20871,26291,30588,32720,35950,51380,56293,56946,69383,150604,
#Partially deleted in new
chr11	77323023	77411904	chr11:77323023-77411904	1	-	77323298	77379385	789624	15	337,49,138,197,100,118,113,49,64,175,120,38,148,101,131,	0,2304,9706,13062,14300,17622,20795,26215,30512,32644,35874,51304,56217,56870,88750,
#Partially deleted in new
chr11	77323210	77379351	chr11:77323210-77379351	0	-	77340704	77379351	789624	8	150,138,197,118,175,120,38,111,	0,9519,12875,17435,32457,35687,51117,56030,
#Partially deleted in new
chr11	77323268	77358953	chr11:77323268-77358953	0	-	77323268	77323268	8553170	8	92,138,197,100,118,113,49,56,	0,9461,12817,14055,17377,20550,25970,35629,
#Partially deleted in new
chr11	77332857	77347072	chr11:77332857-77347072	0	-	77343912	77347072	789624	6	10,197,100,118,113,38,	0,3228,4466,7788,10961,14177,
#Partially deleted in new
chr11	77336115	77349546	chr11:77336115-77349546	0	-	77336115	77336115	8553170	5	167,100,118,113,308,	0,1208,4530,7703,13123,
#Partially deleted in new
chr11	77336253	77343979	chr11:77336253-77343979	0	-	77336253	77336253	8553170	3	29,118,161,	0,4392,7565,
#Partially deleted in new
chr11	77349247	77356298	chr11:77349247-77356298	0	-	77349247	77349247	8553170	3	40,64,631,	0,4288,6420,
#Deleted in new
chr11	77353130	77355951	chr11:77353130-77355951	0	-	77353130	77353130	8553170	2	469,284,	0,2537,
#Partially deleted in new
chr11	77355704	77379447	chr11:77355704-77379447	0	-	77355704	77355704	8553170	4	138,120,38,207,	0,3193,18623,23536,
#Partially deleted in new
chr11	77358840	77473495	chr11:77358840-77473495	0	-	77358840	77358840	8553170	6	177,38,148,101,211,87,	0,15487,20400,21053,33490,114568,
#Partially deleted in new
chr11	77379194	77392383	chr11:77379194-77392383	0	-	77379194	77379194	8553170	3	194,101,53,	0,699,13136,
#Partially deleted in new
chr11	77379359	77411944	chr11:77379359-77411944	0	-	77379361	77392520	789624	5	29,101,208,67,171,	0,534,12971,17667,32414,
#Partially deleted in new
chr11	77379382	77473735	chr11:77379382-77473735	0	-	77379382	77392520	789624	5	6,101,211,57,184,	0,511,12948,76498,94169,
#Partially deleted in new
chr11	77379916	77411933	chr11:77379916-77411933	0	-	77379916	77392520	789624	4	78,211,132,160,	0,12414,17110,31857,
#Partially deleted in new
chr11	77392330	77411933	chr11:77392330-77411933	0	-	77392330	77392520	789624	3	211,79,160,	0,15823,19443,
#Partially deleted in new
chr11	77392442	77474635	chr11:77392442-77474635	0	-	77392442	77392520	789624	3	99,67,336,	0,4584,81857,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	77473370	77477030	chr11:77473370-77477030	3	+	77473370	77473370	8553170	1	3660,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	77566933	77566994	chr11:77566933-77566994	3	-	77566933	77566933	8553170	1	61,	0,
#Partially deleted in new
chr11	77589390	77610009	chr11:77589390-77610009	0	+	77589390	77589390	8553170	4	290,83,117,712,	0,1138,14165,19907,
#Partially deleted in new
chr11	77589634	77610355	chr11:77589634-77610355	3	+	77589992	77609377	789624	3	977,117,1058,	0,13921,19663,
#Partially deleted in new
chr11	77612230	77613041	chr11:77612230-77613041	0	-	77612230	77612230	8553170	2	287,82,	0,729,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	77614529	77637805	chr11:77614529-77637805	3	-	77619627	77637714	789624	7	2166,90,174,108,102,137,216,	0,5076,7970,10433,11187,15233,23060,
#Partially deleted in new
chr11	77616194	77637751	chr11:77616194-77637751	1	-	77619627	77637714	789624	6	501,90,174,108,137,162,	0,3411,6305,8768,13568,21395,
#Partially deleted in new
chr11	77616194	77637772	chr11:77616194-77637772	1	-	77619627	77637714	789624	6	501,90,108,102,137,183,	0,3411,8768,9522,13568,21395,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	77616249	77622531	chr11:77616249-77622531	0	-	77622006	77622531	789624	4	446,90,179,32,	0,3356,5616,6250,
#Partially deleted in new
chr11	77616403	77637794	chr11:77616403-77637794	1	-	77619627	77637714	789624	5	292,90,174,137,205,	0,3202,6096,13359,21186,
#Partially deleted in new
chr11	77618532	77637776	chr11:77618532-77637776	1	-	77619627	77637714	789624	7	155,90,174,108,102,137,187,	0,1073,3967,6430,7184,11230,19057,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	77619483	77622674	chr11:77619483-77622674	0	-	77619483	77619483	8553170	2	212,175,	0,3016,
#Partially deleted in new
chr11	77619605	77637782	chr11:77619605-77637782	0	-	77625793	77637714	789624	5	90,174,108,102,193,	0,2894,5357,6111,17984,
#Partially deleted in new
chr11	77622459	77625031	chr11:77622459-77625031	0	-	77622459	77622459	8553170	2	214,69,	0,2503,
#Partially deleted in new
chr11	77622642	77625551	chr11:77622642-77625551	0	-	77622642	77622642	8553170	2	31,589,	0,2320,
#Partially deleted in new
chr11	77659995	77821017	chr11:77659995-77821017	3	-	77666916	77820714	789624	16	7496,189,221,208,68,110,55,80,105,207,1775,155,206,93,92,490,	0,12046,15040,16796,18090,23714,25109,31163,33511,38491,40725,65549,80735,87040,104602,160532,
#Partially deleted in new
chr11	77666229	77703533	chr11:77666229-77703533	1	-	77666916	77702472	789624	11	1262,189,221,208,68,110,55,80,105,207,2813,	0,5812,8806,10562,11856,17480,18875,24929,27277,32257,34491,
#Deleted in new
chr11	77675078	77677061	chr11:77675078-77677061	0	-	77675078	77675078	8553170	2	178,270,	0,1713,
#Partially deleted in new
chr11	77675094	77698528	chr11:77675094-77698528	0	-	77675094	77698528	789624	8	162,208,68,110,55,80,105,42,	0,1697,2991,8615,10010,16064,18412,23392,
#Partially deleted in new
chr11	77683768	77725680	chr11:77683768-77725680	0	-	77683768	77725680	789624	7	51,55,80,105,207,1775,136,	0,1336,7390,9738,14718,16952,41776,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	77690965	77700761	chr11:77690965-77700761	0	-	77690965	77690965	8553170	4	273,105,207,41,	0,2541,7521,9755,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	77691649	77691751	chr11:77691649-77691751	3	+	77691649	77691649	8553170	1	102,	0,
#Partially deleted in new
chr11	77693592	77700998	chr11:77693592-77700998	0	-	77693592	77700998	789624	3	19,207,269,	0,4894,7137,
#Partially deleted in new
chr11	77701118	77820711	chr11:77701118-77820711	0	-	77701118	77820711	789624	6	1377,155,206,93,92,184,	0,24426,39612,45917,63479,119409,
#Partially deleted in new
chr11	77702400	77764690	chr11:77702400-77764690	0	-	77702400	77702400	8553170	4	95,206,93,93,	0,38330,44635,62197,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	77717711	77718411	chr11:77717711-77718411	3	-	77717711	77717711	8553170	2	335,231,	0,469,
#Partially deleted in new
chr11	77725572	77820706	chr11:77725572-77820706	0	-	77725572	77820706	789624	4	127,206,92,179,	0,15158,39025,94955,
#Deleted in new
chr11	77734474	77735026	chr11:77734474-77735026	7	-	77734474	77734474	16724991	1	552,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	77738679	77739568	chr11:77738679-77739568	3	-	77738679	77738679	8553170	2	251,381,	0,508,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	77762049	77820869	chr11:77762049-77820869	0	-	77762049	77762049	8553170	2	2640,342,	0,58478,
#Partially deleted in new
chr11	77813318	77813676	chr11:77813318-77813676	7	-	77813318	77813318	16724991	1	358,	0,
#Partially deleted in new
chr11	77813353	77820699	chr11:77813353-77820699	0	-	77813353	77813353	8553170	2	348,172,	0,7174,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	77821108	77918432	chr11:77821108-77918432	1	+	77842496	77918099	0	4	72,150,96,372,	0,21370,48613,96952,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	77821113	77900785	chr11:77821113-77900785	0	+	77842496	77884833	789624	5	128,150,96,137,215,	0,21365,48608,63666,79457,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	77821141	77841255	chr11:77821141-77841255	0	+	77821141	77821141	8553170	3	100,121,237,	0,10750,19877,
#Partially deleted in new
chr11	77821143	77872361	chr11:77821143-77872361	1	+	77842496	77872315	0	4	98,150,96,187,	0,21335,48578,51031,
#Partially deleted in new
chr11	77821161	77900686	chr11:77821161-77900686	1	+	77842496	77900686	789624	5	80,150,96,100,116,	0,21317,48560,55788,79409,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	77829653	77872262	chr11:77829653-77872262	3	-	77829653	77829653	8553170	2	474,111,	0,42498,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	77841018	77872354	chr11:77841018-77872354	1	+	77842496	77872315	789624	5	42,150,138,96,180,	0,1460,14326,28703,31156,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	77841137	77872352	chr11:77841137-77872352	1	+	77841185	77872315	789624	4	87,150,96,178,	0,1341,28584,31037,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	77850603	77851511	chr11:77850603-77851511	3	+	77850603	77850603	8553170	2	397,154,	0,754,
#Partially deleted in new
chr11	77866411	77870091	chr11:77866411-77870091	3	-	77866411	77866411	8553170	2	315,397,	0,3283,
#Partially deleted in new
chr11	77868721	77869195	chr11:77868721-77869195	7	-	77868721	77868721	16724991	1	474,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	77876947	77900771	chr11:77876947-77900771	0	+	77876947	77884833	789624	3	102,137,201,	0,7832,23623,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr11	77878719	77994671	chr11:77878719-77994671	0	-	77961103	77994643	789624	24	408,121,144,160,60,131,81,94,183,234,158,134,116,143,206,175,72,121,89,51,186,118,192,82,	0,5112,12599,12961,15570,22701,24820,28997,32250,39311,40101,42620,43636,46030,49622,59931,62460,77222,80026,81621,82233,102739,112388,115870,
#Partially deleted in new
chr11	77878719	77994678	chr11:77878719-77994678	3	-	77878948	77994643	789624	23	408,121,144,160,60,131,81,94,158,134,116,143,206,175,72,121,89,51,186,107,118,192,89,	0,5112,12599,12961,15570,22701,24820,28997,40101,42620,43636,46030,49622,59931,62460,77222,80026,81621,82233,100276,102739,112388,115870,
#Partially deleted in new
chr11	77878721	77911154	chr11:77878721-77911154	1	-	77878948	77911016	789624	9	406,121,144,160,60,131,81,94,185,	0,5110,12597,12959,15568,22699,24818,28995,32248,
#Partially deleted in new
chr11	77901356	77921446	chr11:77901356-77921446	0	-	77901356	77901356	8553170	5	195,81,94,158,107,	0,2183,6360,17464,19983,
#Partially deleted in new
chr11	77901452	77924861	chr11:77901452-77924861	0	-	77901452	77901452	8553170	4	99,105,116,82,	0,19916,20903,23327,
#Partially deleted in new
chr11	77914989	77915275	chr11:77914989-77915275	7	-	77914989	77914989	16724991	1	286,	0,
#Partially deleted in new
chr11	77921350	77922805	chr11:77921350-77922805	0	-	77921350	77921350	8553170	2	123,450,	0,1005,
#Partially deleted in new
chr11	77922352	77938771	chr11:77922352-77938771	0	-	77922352	77922352	8553170	4	119,187,206,121,	0,2353,5989,16298,
#Partially deleted in new
chr11	77924441	77994666	chr11:77924441-77994666	1	-	77924745	77994643	789624	12	451,206,175,72,121,89,51,186,107,118,192,77,	0,3900,14209,16738,31500,34304,35899,36511,54554,57017,66666,70148,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	77977888	77994653	chr11:77977888-77994653	0	-	77987653	77994643	789624	5	1212,118,95,192,64,	0,3570,9715,13219,16701,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	77981458	77994665	chr11:77981458-77994665	0	-	77987653	77994643	789624	4	118,170,192,76,	0,6070,9649,13131,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	77987015	77994670	chr11:77987015-77994670	1	-	77987653	77994643	789624	3	683,192,81,	0,4092,7574,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	78015714	78023294	chr11:78015714-78023294	3	-	78016592	78023249	789624	2	1556,135,	0,7445,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	78015714	78016495	chr11:78015714-78016495	3	+	78015714	78015714	8553170	2	311,375,	0,406,
#Partially deleted in new
chr11	78016592	78046191	chr11:78016592-78046191	1	-	78016592	78017270	789624	3	678,95,131,	0,22071,29468,
#Partially deleted in new
chr11	78016970	78079844	chr11:78016970-78079844	1	-	78017235	78079744	789624	2	300,266,	0,62608,
#Partially deleted in new
chr11	78017045	78079865	chr11:78017045-78079865	3	-	78017235	78079744	789624	3	225,144,287,	0,55952,62533,
#Partially deleted in new
chr11	78017174	78079773	chr11:78017174-78079773	1	-	78038663	78079744	789624	4	96,95,144,195,	0,21489,55823,62404,
#Partially deleted in new
chr11	78017174	78079773	chr11:78017174-78079773	1	-	78038663	78079744	789624	3	96,95,195,	0,21489,62404,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	78022932	78023721	chr11:78022932-78023721	3	+	78022932	78022932	8553170	2	89,188,	0,601,
#Partially deleted in new
chr11	78063860	78068351	chr11:78063860-78068351	3	+	78063881	78064322	789624	2	481,693,	0,3798,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	78068303	78080219	chr11:78068303-78080219	3	-	78069986	78079744	0	3	1733,144,641,	0,4694,11275,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	78068348	78079841	chr11:78068348-78079841	1	-	78069872	78079744	0	3	1562,63,263,	0,4730,11230,
#Partially deleted in new
chr11	78069855	78079819	chr11:78069855-78079819	1	-	78069986	78079744	789624	2	181,241,	0,9723,
#Partially deleted in new
chr11	78069857	78079819	chr11:78069857-78079819	1	-	78069986	78079744	0	3	179,75,241,	0,3140,9721,
#Partially deleted in new
chr11	78072863	78079861	chr11:78072863-78079861	1	-	78072983	78079744	789624	2	278,283,	0,6715,
#Partially deleted in new
chr11	78100935	78113941	chr11:78100935-78113941	0	-	78100963	78113941	789624	6	260,73,98,106,121,56,	0,3044,3420,5871,11714,12950,
#Partially deleted in new
chr11	78100941	78139660	chr11:78100941-78139660	3	-	78100963	78139588	789624	13	254,73,98,140,140,121,104,127,68,110,194,79,167,	0,3038,3414,5865,8500,11708,12944,13324,18240,20123,23079,26416,38552,
#Partially deleted in new
chr11	78100944	78112751	chr11:78100944-78112751	0	-	78101174	78112751	789624	3	251,140,102,	0,8497,11705,
#Partially deleted in new
chr11	78100945	78109526	chr11:78100945-78109526	0	-	78100963	78109526	789624	5	250,73,98,106,85,	0,3034,3410,5861,8496,
#Partially deleted in new
chr11	78100945	78104549	chr11:78100945-78104549	0	-	78100945	78100945	8553170	3	250,73,194,	0,3034,3410,
#Partially deleted in new
chr11	78100965	78139649	chr11:78100965-78139649	0	-	78121174	78139588	789624	13	230,73,98,140,140,121,104,127,68,144,194,79,156,	0,3014,3390,5841,8476,11684,12920,13300,18216,20099,23055,26392,38528,
#Partially deleted in new
chr11	78101060	78121163	chr11:78101060-78121163	0	-	78101060	78121163	789624	8	135,73,98,140,104,127,68,99,	0,2919,3295,5746,12825,13205,18121,20004,
#Partially deleted in new
chr11	78106809	78114376	chr11:78106809-78114376	0	-	78106809	78106809	8553170	4	137,121,104,111,	0,5840,7076,7456,
#Partially deleted in new
chr11	78112379	78121076	chr11:78112379-78121076	0	-	78112608	78121076	789624	5	391,104,127,68,12,	0,1506,1886,6802,8685,
#Partially deleted in new
chr11	78112666	78139624	chr11:78112666-78139624	0	-	78112666	78139514	789624	7	104,104,127,68,110,194,131,	0,1219,1599,6515,8398,11354,26827,
#Partially deleted in new
chr11	78112703	78139622	chr11:78112703-78139622	0	-	78112703	78139588	789624	8	67,104,127,68,110,194,82,129,	0,1182,1562,6478,8361,11317,14654,26790,
#Partially deleted in new
chr11	78112765	78139619	chr11:78112765-78139619	0	-	78112765	78124124	789624	8	5,104,127,68,110,194,79,91,	0,1120,1500,6416,8299,11255,14592,26763,
#Partially deleted in new
chr11	78121136	78139258	chr11:78121136-78139258	0	-	78121136	78138777	789624	4	38,194,79,549,	0,2884,6221,17573,
#Partially deleted in new
chr11	78124020	78139630	chr11:78124020-78139630	0	-	78124020	78138726	789624	4	194,79,58,137,	0,3337,14689,15473,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	78133419	78133522	chr11:78133419-78133522	3	-	78133419	78133419	8553170	1	103,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	78139770	78142059	chr11:78139770-78142059	1	+	78139770	78139770	8553170	2	302,554,	0,1735,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	78139802	78143088	chr11:78139802-78143088	1	+	78139802	78139802	8553170	2	96,1693,	0,1593,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	78139814	78141922	chr11:78139814-78141922	1	+	78139814	78139814	8553170	2	258,328,	0,1780,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	78171248	78188822	chr11:78171248-78188822	3	-	78173771	78174554	789624	2	3335,250,	0,17324,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	78173774	78175323	chr11:78173774-78175323	1	+	78173774	78173774	8553170	1	1549,	0,
#Partially deleted in new
chr11	78174058	78188588	chr11:78174058-78188588	0	-	78174058	78174554	789624	3	525,136,65,	0,12622,14465,
#Partially deleted in new
chr11	78174133	78176302	chr11:78174133-78176302	0	-	78174133	78174554	789624	2	450,49,	0,2120,
#Partially deleted in new
chr11	78174207	78188618	chr11:78174207-78188618	0	-	78174207	78174554	789624	3	376,136,46,	0,12473,14365,
#Partially deleted in new
chr11	78174323	78188624	chr11:78174323-78188624	0	-	78174339	78174554	789624	3	260,247,52,	0,3415,14249,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	78174442	78188624	chr11:78174442-78188624	0	-	78174442	78174554	789624	4	141,98,247,52,	0,2445,3296,14130,
#Partially deleted in new
chr11	78188811	78214026	chr11:78188811-78214026	1	+	78205940	78213813	789624	6	346,194,94,107,1297,381,	0,17030,18718,20045,20636,24834,
#Partially deleted in new
chr11	78188822	78214138	chr11:78188822-78214138	0	+	78188822	78188822	8553170	3	335,1297,493,	0,20625,24823,
#Partially deleted in new
chr11	78188902	78209482	chr11:78188902-78209482	0	+	78197994	78209482	789624	9	255,133,130,102,159,194,94,107,35,	0,9033,10692,11230,11747,16939,18627,19954,20545,
#Partially deleted in new
chr11	78188906	78214711	chr11:78188906-78214711	3	+	78196245	78213813	0	11	251,683,133,130,102,159,194,94,107,1297,1066,	0,7329,9029,10688,11226,11743,16935,18623,19950,20541,24739,
#Partially deleted in new
chr11	78196796	78214419	chr11:78196796-78214419	0	+	78196796	78200202	789624	9	122,133,102,159,198,94,107,1297,774,	0,1139,3336,3853,9045,10733,12060,12651,16849,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	78198969	78214707	chr11:78198969-78214707	1	+	78199595	78213813	0	8	755,102,159,194,94,107,1297,1062,	0,1163,1680,6872,8560,9887,10478,14676,
#Partially deleted in new
chr11	78207236	78209551	chr11:78207236-78209551	0	+	78207236	78207236	8553170	3	387,107,104,	0,1620,2211,
#Partially deleted in new
chr11	78215296	78341880	chr11:78215296-78341880	1	-	78219271	78280862	0	10	4119,126,103,91,265,95,587,244,301,121,	0,5022,6380,6808,8115,9811,11168,34860,65304,126463,
#Partially deleted in new
chr11	78215296	78417806	chr11:78215296-78417806	3	-	78219271	78417720	0	10	4119,126,103,91,265,95,587,244,301,161,	0,5022,6380,6808,8115,9811,11168,34860,65304,202349,
#Partially deleted in new
chr11	78226619	78231932	chr11:78226619-78231932	0	-	78226619	78226619	8553170	2	432,124,	0,5189,
#Partially deleted in new
chr11	78226956	78417822	chr11:78226956-78417822	0	-	78226956	78226956	8553170	4	95,301,77,177,	0,53644,91186,190689,
#Partially deleted in new
chr11	78250270	78418348	chr11:78250270-78418348	0	-	78250270	78280862	789624	3	130,301,112,	0,30330,167966,
#Partially deleted in new
chr11	78250356	78417779	chr11:78250356-78417779	0	-	78250356	78280862	789624	4	44,301,88,134,	0,30244,113659,167289,
#Partially deleted in new
chr11	78280459	78417771	chr11:78280459-78417771	0	-	78280459	78280459	8553170	2	442,126,	0,137186,
#Partially deleted in new
chr11	78324757	78444049	chr11:78324757-78444049	3	+	78324757	78324757	8553170	2	35,402,	0,118890,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	78388060	78392405	chr11:78388060-78392405	3	+	78388060	78388060	8553170	2	95,270,	0,4075,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	78423981	78429836	chr11:78423981-78429836	3	-	78423981	78423981	789624	4	1214,69,222,137,	0,1355,3327,5718,
#Partially deleted in new
chr11	78435960	78574864	chr11:78435960-78574864	3	-	78436669	78574488	789624	14	854,27,98,138,67,38,99,133,95,81,141,121,110,517,	0,5130,7700,29915,33286,42477,42624,57102,92881,123578,130171,132671,135374,138387,
#Partially deleted in new
chr11	78436188	78443759	chr11:78436188-78443759	0	-	78436669	78443759	789624	2	626,99,	0,7472,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr11	78436222	78573530	chr11:78436222-78573530	1	-	78436669	78528849	789624	14	592,27,98,138,67,38,99,133,95,81,141,121,110,397,	0,4868,7438,29653,33024,42215,42362,56840,92619,123316,129909,132409,135112,136911,
#Partially deleted in new
chr11	78436732	78566267	chr11:78436732-78566267	0	-	78478676	78566267	789624	10	82,27,98,138,67,38,99,95,81,136,	0,4358,6928,29143,32514,41705,41852,92109,122806,129399,
#Partially deleted in new
chr11	78465882	78574518	chr11:78465882-78574518	0	-	78465882	78574488	789624	6	131,81,141,121,110,171,	0,93656,100249,102749,105452,108465,
#Partially deleted in new
chr11	78528841	78574874	chr11:78528841-78574874	0	-	78528841	78528849	8553170	6	95,81,141,121,110,46,	0,30697,37290,39790,42493,45987,
#Partially deleted in new
chr11	78568714	78571670	chr11:78568714-78571670	0	-	78568714	78568714	8553170	2	38,336,	0,2620,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	78579254	78579356	chr11:78579254-78579356	3	-	78579254	78579254	8553170	1	102,	0,
#Deleted in new
chr11	78581674	78582156	chr11:78581674-78582156	7	+	78581674	78581674	16724991	1	482,	0,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr11	78652830	79440651	chr11:78652830-79440651	3	-	78658057	79069944	789624	34	5986,143,1615,297,236,173,878,155,233,21,250,144,268,262,120,217,147,27,186,201,195,102,211,215,171,236,99,256,270,288,97,102,56,143,	0,8618,16106,19202,23321,35223,48695,55530,59651,67539,69837,73248,76545,79485,85620,103974,118161,125771,134067,152461,159291,161463,201273,203133,210131,236954,238407,250437,411907,416891,495879,562977,644657,787678,
#Partially deleted in new
chr11	78657806	78702004	chr11:78657806-78702004	0	-	78657998	78702004	789624	6	248,1615,297,236,173,479,	0,11130,14226,18345,30247,43719,
#Partially deleted in new
chr11	78749249	78756480	chr11:78749249-78756480	3	+	78749249	78749249	8553170	2	84,236,	0,6995,
#Partially deleted in new
chr11	78770991	78805411	chr11:78770991-78805411	0	-	78770991	78805411	789624	3	147,186,120,	0,15906,34300,
#Partially deleted in new
chr11	78889865	78962219	chr11:78889865-78962219	0	-	78889865	78889865	8553170	4	155,99,256,77,	0,1372,13402,72277,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	78889932	78903886	chr11:78889932-78903886	0	-	78889932	78903833	789624	4	88,99,256,81,	0,1305,13335,13873,
#Partially deleted in new
chr11	78924455	79021793	chr11:78924455-79021793	0	-	78924455	78924455	8553170	3	291,180,219,	0,90115,97119,
#Partially deleted in new
chr11	79064598	79269673	chr11:79064598-79269673	0	-	79064598	79064598	8553170	5	409,288,97,102,88,	0,5123,84111,151209,204987,
#Partially deleted in new
chr11	79069941	79215909	chr11:79069941-79215909	0	-	79069941	79069944	8553170	2	68,102,	0,145866,
#Deleted in new
chr11	79092847	79093835	chr11:79092847-79093835	1	+	79092847	79092847	8553170	4	36,147,122,101,	0,357,617,887,
#Partially deleted in new
chr11	79093285	79098003	chr11:79093285-79098003	0	+	79093285	79093285	8553170	2	66,654,	0,4064,
#Partially deleted in new
chr11	79093298	79097854	chr11:79093298-79097854	3	+	79093298	79093298	8553170	2	53,1844,	0,2712,
#Partially deleted in new
chr11	79148729	79439200	chr11:79148729-79439200	0	-	79148729	79148729	8553170	4	77,102,56,239,	0,67078,148758,290232,
#Partially deleted in new
chr11	79148800	79440948	chr11:79148800-79440948	0	-	79148800	79148800	8553170	5	6,102,144,56,440,	0,67007,72179,148687,291708,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	79191557	79193160	chr11:79191557-79193160	3	+	79191557	79191557	8553170	2	235,139,	0,1464,
#Deleted in new
chr11	79402021	79402109	chr11:79402021-79402109	3	-	79402021	79402021	789624	1	88,	0,
#Deleted in new
chr11	79422168	79422226	chr11:79422168-79422226	3	-	79422168	79422168	789624	1	58,	0,
#Partially deleted in new
chr11	79604966	79612300	chr11:79604966-79612300	3	-	79604966	79604966	8553170	2	196,638,	0,6696,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	79966804	79968708	chr11:79966804-79968708	3	+	79966804	79966804	8553170	1	1904,	0,
#Partially deleted in new
chr11	79987512	79989630	chr11:79987512-79989630	7	+	79987512	79987512	16724991	1	2118,	0,
#Partially deleted in new
chr11	80321619	80327911	chr11:80321619-80327911	3	-	80321619	80321619	8553170	2	507,78,	0,6214,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	80527959	80528066	chr11:80527959-80528066	3	+	80527959	80527959	8553170	1	107,	0,
#Deleted in new
chr11	80653428	80653988	chr11:80653428-80653988	7	-	80653428	80653428	16724991	1	560,	0,
#Partially deleted in new
chr11	80751199	80762826	chr11:80751199-80762826	3	-	80751199	80751199	789624	3	631,91,849,	0,9284,10778,
#Deleted in new
chr11	80957316	80957634	chr11:80957316-80957634	7	+	80957316	80957316	16724991	1	318,	0,
#Deleted in new
chr11	81552225	81552516	chr11:81552225-81552516	7	+	81552225	81552225	16724991	1	291,	0,
#Deleted in new
chr11	81555909	81556425	chr11:81555909-81556425	7	-	81555909	81555909	16724991	1	516,	0,
#Partially deleted in new
chr11	81842434	81842669	chr11:81842434-81842669	7	-	81842434	81842434	16724991	1	235,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	81879850	82100043	chr11:81879850-82100043	0	-	81879850	81879850	8553170	3	317,143,70,	0,2303,220123,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	81879853	82403913	chr11:81879853-82403913	3	-	81879853	81879853	789624	8	314,143,127,148,234,79,117,235,	0,2300,135754,216607,220120,470072,476658,523825,
#Partially deleted in new
chr11	81890740	81890836	chr11:81890740-81890836	3	-	81890740	81890740	5263520	1	96,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	81970993	81987813	chr11:81970993-81987813	3	+	81970993	81970993	8553170	2	255,87,	0,16733,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	82100192	82718082	chr11:82100192-82718082	0	-	82100192	82100192	8553170	5	15,117,96,50,294,	0,256319,572899,612876,617596,
#Partially deleted in new
chr11	82689558	82689768	chr11:82689558-82689768	7	+	82689558	82689558	16724991	1	210,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	82729940	82733864	chr11:82729940-82733864	3	-	82732448	82733729	789624	1	3924,	0,
#Partially deleted in new
chr11	82791661	82817146	chr11:82791661-82817146	3	+	82791661	82791661	8553170	2	63,383,	0,25102,
#Deleted in new
chr11	82805353	82806509	chr11:82805353-82806509	7	+	82805353	82805353	16724991	1	1156,	0,
#Partially deleted in new
chr11	82823501	82900597	chr11:82823501-82900597	3	-	82824905	82900402	0	9	1621,188,165,170,158,182,102,141,363,	0,14885,15759,25547,26412,26822,29675,36475,76733,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	82824366	82831438	chr11:82824366-82831438	0	-	82824366	82824366	8553170	1	7072,	0,
#Partially deleted in new
chr11	82824367	82900430	chr11:82824367-82900430	1	-	82824905	82900402	0	10	755,188,165,170,158,182,102,141,63,196,	0,14019,14893,24681,25546,25956,28809,35609,60455,75867,
#Partially deleted in new
chr11	82824372	82840843	chr11:82824372-82840843	0	-	82824372	82824372	8553170	3	750,188,1583,	0,14014,14888,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	82824984	82845806	chr11:82824984-82845806	0	-	82824984	82824984	8553170	5	138,188,165,121,54,	0,13402,14276,18199,20768,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	82835508	82837222	chr11:82835508-82837222	7	+	82835508	82835508	16724991	4	354,299,112,150,	0,699,1353,1564,
#Partially deleted in new
chr11	82838386	82845722	chr11:82838386-82845722	0	-	82838386	82838386	8553170	3	188,165,107,	0,874,7229,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	82838447	82845734	chr11:82838447-82845734	0	-	82838447	82838447	8553170	4	127,165,121,124,	0,813,4736,7163,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	82838502	82845822	chr11:82838502-82845822	0	-	82838502	82838502	8553170	4	72,165,121,207,	0,758,4681,7113,
#Partially deleted in new
chr11	82839281	82846179	chr11:82839281-82846179	0	-	82839281	82839281	8553170	2	144,427,	0,6471,
#Partially deleted in new
chr11	82839330	82901658	chr11:82839330-82901658	0	-	82839330	82853272	789624	7	95,170,158,182,102,141,88,	0,9718,10583,10993,13846,20646,62240,
#Partially deleted in new
chr11	82849076	82901657	chr11:82849076-82901657	0	-	82849076	82853272	789624	5	142,158,182,102,199,	0,837,1247,4100,52382,
#Partially deleted in new
chr11	82849104	82901740	chr11:82849104-82901740	0	-	82849104	82853272	789624	6	114,158,182,102,141,148,	0,809,1219,4072,10872,52488,
#Partially deleted in new
chr11	82849211	82901689	chr11:82849211-82901689	0	-	82849211	82853272	789624	5	7,158,182,102,97,	0,702,1112,3965,52381,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	82849913	82970584	chr11:82849913-82970584	0	-	82849913	82853272	789624	6	158,182,102,141,51,103,	0,410,3263,10063,107151,120568,
#Partially deleted in new
chr11	82850050	82901533	chr11:82850050-82901533	0	-	82850050	82853272	789624	5	21,182,102,141,45,	0,273,3126,9926,51438,
#Partially deleted in new
chr11	82850050	82900946	chr11:82850050-82900946	0	-	82850050	82900826	789624	5	21,182,102,141,165,	0,273,3126,9926,50731,
#Partially deleted in new
chr11	82850405	82900832	chr11:82850405-82900832	0	-	82850405	82900656	789624	4	100,102,141,182,	0,2771,9571,50245,
#Partially deleted in new
chr11	82850472	82901536	chr11:82850472-82901536	0	-	82850472	82853272	789624	4	33,102,141,78,	0,2704,9504,50986,
#Partially deleted in new
chr11	82853193	82858771	chr11:82853193-82858771	0	-	82853193	82853272	789624	2	85,489,	0,5089,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	82899974	82928889	chr11:82899974-82928889	0	+	82914738	82928889	789624	5	179,368,100,129,113,	0,1480,13312,14748,28802,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	82901697	82931822	chr11:82901697-82931822	1	+	82914738	82931819	789624	5	125,100,129,162,91,	0,11589,13025,27079,30034,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	82901697	82934655	chr11:82901697-82934655	1	+	82914738	82931819	789624	4	125,100,129,2924,	0,11589,13025,30034,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	82901726	82934659	chr11:82901726-82934659	3	+	82914738	82934335	789624	6	96,100,129,162,118,2928,	0,11560,12996,27050,28430,30005,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	82901735	82928942	chr11:82901735-82928942	0	+	82901735	82901735	8553170	4	87,100,129,166,	0,11551,12987,27041,
#Partially deleted in new
chr11	82901735	82928891	chr11:82901735-82928891	0	+	82914738	82928891	789624	3	87,129,115,	0,12987,27041,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	82901741	82932216	chr11:82901741-82932216	1	+	82914738	82931819	789624	5	81,104,129,162,485,	0,11541,12981,27035,29990,
#Partially deleted in new
chr11	82914688	82934655	chr11:82914688-82934655	1	+	82914738	82934335	789624	4	163,162,118,2924,	0,14088,15468,17043,
#Deleted in new
chr11	82957422	82958216	chr11:82957422-82958216	7	+	82957422	82957422	16724991	1	794,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	82963680	83039115	chr11:82963680-83039115	3	-	82963680	82963680	8553170	2	61,372,	0,75063,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	82973132	83071866	chr11:82973132-83071866	3	-	82982164	82997316	0	6	9283,184,84,101,101,176,	0,14454,20906,24091,61039,98558,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	82973132	83071462	chr11:82973132-83071462	1	-	82982164	82997316	0	5	9283,184,84,101,131,	0,14454,20906,24091,98199,
#Partially deleted in new
chr11	82979267	83071923	chr11:82979267-83071923	1	-	82982277	82997316	0	5	3148,180,84,101,233,	0,8323,14771,17956,92423,
#Partially deleted in new
chr11	82981789	83034569	chr11:82981789-83034569	1	-	82982164	82997316	0	5	626,184,84,101,398,	0,5797,12249,15434,52382,
#Partially deleted in new
chr11	82982088	82992383	chr11:82982088-82992383	0	-	82982164	82992383	789624	3	327,184,69,	0,5498,10226,
#Partially deleted in new
chr11	82982156	83071854	chr11:82982156-83071854	1	-	82982164	82997316	0	5	259,184,84,101,164,	0,5430,11882,15067,89534,
#Partially deleted in new
chr11	82982271	83034201	chr11:82982271-83034201	0	-	82982271	82997316	789624	5	144,184,84,101,75,	0,5315,11767,14952,51855,
#Partially deleted in new
chr11	82982358	82997478	chr11:82982358-82997478	0	-	82982358	82997316	789624	4	57,184,84,255,	0,5228,11680,14865,
#Partially deleted in new
chr11	82987023	82997413	chr11:82987023-82997413	1	-	82987578	82997316	789624	2	747,190,	0,10200,
#Partially deleted in new
chr11	82987400	82997413	chr11:82987400-82997413	1	-	82987578	82997316	789624	3	370,84,190,	0,6638,9823,
#Partially deleted in new
chr11	82987582	83071828	chr11:82987582-83071828	0	-	82987582	82994077	789624	4	188,68,101,138,	0,6456,9641,84108,
#Partially deleted in new
chr11	82987647	83035694	chr11:82987647-83035694	0	-	82987647	82997316	789624	4	123,84,101,365,	0,6391,9576,47682,
#Partially deleted in new
chr11	82987751	83034633	chr11:82987751-83034633	0	-	82987751	82997316	789624	3	19,101,462,	0,9472,46420,
#Partially deleted in new
chr11	82994038	83071896	chr11:82994038-83071896	0	-	82994038	82997316	789624	5	84,101,101,56,206,	0,3185,40133,40688,77652,
#Partially deleted in new
chr11	82994048	83035555	chr11:82994048-83035555	0	-	82994048	82997316	789624	5	74,101,101,56,226,	0,3175,40123,40678,41281,
#Partially deleted in new
chr11	83040805	83041403	chr11:83040805-83041403	7	-	83040805	83040805	16724991	2	93,193,	0,405,
#Partially deleted in new
chr11	83041463	83041598	chr11:83041463-83041598	3	-	83041463	83041463	789624	1	135,	0,
#Partially deleted in new
chr11	83072065	83073646	chr11:83072065-83073646	0	+	83072065	83072065	789624	3	81,182,344,	0,557,1237,
#Partially deleted in new
chr11	83072065	83106719	chr11:83072065-83106719	0	+	83072065	83072065	8553170	3	81,182,241,	0,557,34413,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	83072081	83077173	chr11:83072081-83077173	3	+	83072081	83072081	8553170	4	100,182,145,140,	0,541,1221,4952,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	83072103	83092338	chr11:83072103-83092338	0	+	83072103	83072103	8553170	2	34,306,	0,19929,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	83072117	83073383	chr11:83072117-83073383	1	+	83072117	83072117	8553170	2	64,761,	0,505,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	83072121	83073194	chr11:83072121-83073194	0	+	83072121	83072121	8553170	2	25,572,	0,501,
#Partially deleted in new
chr11	83072342	83073600	chr11:83072342-83073600	0	+	83072342	83072342	8553170	2	360,298,	0,960,
#Partially deleted in new
chr11	83072354	83073968	chr11:83072354-83073968	1	+	83072354	83072354	8553170	2	450,666,	0,948,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	83083686	83084138	chr11:83083686-83084138	3	+	83083686	83083686	8553170	1	452,	0,
#Deleted in new
chr11	83106579	83106961	chr11:83106579-83106961	7	-	83106579	83106579	16724991	1	382,	0,
#Deleted in new
chr11	83111059	83111442	chr11:83111059-83111442	7	-	83111059	83111059	16724991	1	383,	0,
#Partially deleted in new
chr11	83132055	83134737	chr11:83132055-83134737	7	+	83132055	83132055	16724991	4	156,295,118,63,	0,218,2168,2619,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr11	83156987	83187451	chr11:83156987-83187451	3	+	83157439	83184894	789624	16	644,126,189,195,1115,184,91,1568,97,120,106,184,156,93,36,2773,	0,4339,6691,7219,8612,10137,10427,11440,14830,20097,20726,24020,24866,25411,26050,27691,
#Partially deleted in new
chr11	83157126	83168938	chr11:83157126-83168938	0	+	83157439	83168938	789624	8	505,126,189,195,1115,184,484,511,	0,4200,6552,7080,8473,9998,10288,11301,
#Partially deleted in new
chr11	83157142	83168687	chr11:83157142-83168687	0	+	83157439	83168687	789624	8	489,126,189,195,1115,184,91,260,	0,4184,6536,7064,8457,9982,10272,11285,
#Partially deleted in new
chr11	83157158	83163785	chr11:83157158-83163785	0	+	83157439	83163785	789624	2	473,107,	0,6520,
#Deleted in new
chr11	83157159	83158879	chr11:83157159-83158879	0	+	83157159	83157159	8553170	1	1720,	0,
#Partially deleted in new
chr11	83171250	83181927	chr11:83171250-83181927	0	+	83171282	83181927	789624	6	47,97,120,106,184,74,	0,567,5834,6463,9757,10603,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	83180143	83184520	chr11:83180143-83184520	3	+	83180143	83180143	8553170	2	466,439,	0,3938,
#Deleted in new
chr11	83180421	83183059	chr11:83180421-83183059	0	+	83180421	83180421	8553170	4	770,156,93,22,	0,1432,1977,2616,
#Partially deleted in new
chr11	83184490	83191097	chr11:83184490-83191097	1	-	83184490	83184490	8553170	2	363,43,	0,6564,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	83185520	83187036	chr11:83185520-83187036	3	-	83185520	83185520	789624	1	1516,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	83190905	83193200	chr11:83190905-83193200	0	-	83190905	83190905	8553170	1	2295,	0,
#Partially deleted in new
chr11	83191028	83193794	chr11:83191028-83193794	1	-	83191028	83191028	8553170	3	140,81,328,	0,1707,2438,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	83191062	83193600	chr11:83191062-83193600	1	-	83191062	83191062	8553170	4	106,114,81,134,	0,1365,1673,2404,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	83191064	83193620	chr11:83191064-83193620	1	-	83191064	83191064	8553170	4	104,114,57,154,	0,1363,1671,2402,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	83192136	83193662	chr11:83192136-83193662	3	-	83192136	83192136	8553170	2	680,196,	0,1330,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	83192272	83193663	chr11:83192272-83193663	1	-	83192272	83192272	8553170	3	269,81,197,	0,463,1194,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	83193738	83215200	chr11:83193738-83215200	1	+	83194670	83212663	789624	6	990,164,108,120,136,2548,	0,4740,12319,16561,17556,18914,
#Partially deleted in new
chr11	83193750	83212794	chr11:83193750-83212794	1	+	83210308	83212663	789624	6	284,164,108,120,136,142,	0,4728,12307,16549,17544,18902,
#Partially deleted in new
chr11	83193875	83256099	chr11:83193875-83256099	1	+	83194670	83255934	789624	12	853,164,108,117,136,201,126,106,176,127,145,255,	0,4603,12182,16424,17419,30979,33871,42528,46883,51622,54067,61969,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	83194248	83215200	chr11:83194248-83215200	1	+	83194670	83213085	789624	6	480,164,108,120,136,2222,	0,4230,11809,16051,17046,18730,
#Partially deleted in new
chr11	83194397	83255995	chr11:83194397-83255995	1	+	83194670	83255890	789624	12	331,164,108,120,136,201,126,106,176,127,145,147,	0,4081,11660,15902,16897,30457,33349,42006,46361,51100,53545,61451,
#Partially deleted in new
chr11	83194508	83248971	chr11:83194508-83248971	1	+	83194670	83248001	789624	10	220,80,108,120,136,201,126,106,176,1029,	0,3970,11549,15791,16786,30346,33238,41895,46250,53434,
#Partially deleted in new
chr11	83194644	83248543	chr11:83194644-83248543	3	+	83194670	83248204	789624	11	84,164,108,120,136,201,126,106,176,127,601,	0,3834,11413,15655,16650,30210,33102,41759,46114,50853,53298,
#Deleted in new
chr11	83209398	83209634	chr11:83209398-83209634	7	+	83209398	83209398	16724991	1	236,	0,
#Partially deleted in new
chr11	83209430	83213379	chr11:83209430-83213379	3	-	83209430	83209430	8553170	2	676,90,	0,3859,
#Partially deleted in new
chr11	83213004	83213404	chr11:83213004-83213404	7	+	83213004	83213004	16724991	1	400,	0,
#Partially deleted in new
chr11	83227784	83256099	chr11:83227784-83256099	0	+	83227784	83255934	789624	4	88,106,145,255,	0,8619,20158,28060,
#Partially deleted in new
chr11	83247953	83260694	chr11:83247953-83260694	0	+	83247953	83247953	8553170	3	134,83,638,	0,7891,12103,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	83259096	83286407	chr11:83259096-83286407	3	-	83261910	83285972	789624	9	2870,115,54,72,42,102,104,120,535,	0,6768,14550,14696,14854,15542,19629,21044,26776,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	83261316	83286390	chr11:83261316-83286390	1	-	83261910	83286172	789624	9	650,115,54,72,42,102,104,120,291,	0,4548,12330,12476,12634,13322,17409,18824,24783,
#Partially deleted in new
chr11	83261455	83286354	chr11:83261455-83286354	0	-	83273929	83285972	789624	8	511,115,54,200,102,104,120,482,	0,4409,12191,12337,13183,17270,18685,24417,
#Partially deleted in new
chr11	83261455	83286351	chr11:83261455-83286351	1	-	83261910	83278746	789624	9	511,115,54,72,42,102,104,120,799,	0,4409,12191,12337,12495,13183,17270,18685,24097,
#Partially deleted in new
chr11	83261461	83285998	chr11:83261461-83285998	1	-	83261910	83278746	789624	9	505,115,54,72,42,102,104,120,872,	0,4403,12185,12331,12489,13177,17264,18679,23665,
#Partially deleted in new
chr11	83261729	83278830	chr11:83261729-83278830	0	-	83261939	83278830	789624	6	237,54,72,42,102,105,	0,11917,12063,12221,12909,16996,
#Partially deleted in new
chr11	83261756	83286210	chr11:83261756-83286210	0	-	83274666	83285972	789624	8	210,115,54,72,42,102,120,338,	0,4108,11890,12036,12194,12882,18384,24116,
#Partially deleted in new
chr11	83261795	83286355	chr11:83261795-83286355	0	-	83274666	83285972	789624	7	171,115,54,72,42,102,483,	0,4069,11851,11997,12155,12843,24077,
#Partially deleted in new
chr11	83261890	83285979	chr11:83261890-83285979	0	-	83285194	83285972	789624	9	76,115,54,72,42,102,120,85,107,	0,3974,11756,11902,12060,12748,18250,23236,23982,
#Partially deleted in new
chr11	83261928	83285978	chr11:83261928-83285978	1	-	83265912	83285972	789624	8	38,115,92,42,102,104,120,106,	0,3936,11718,12022,12710,16797,18212,23944,
#Partially deleted in new
chr11	83265889	83285988	chr11:83265889-83285988	0	-	83274733	83285972	789624	8	90,54,72,42,125,104,120,116,	0,7757,7903,8061,8749,12836,14251,19983,
#Partially deleted in new
chr11	83265899	83285990	chr11:83265899-83285990	0	-	83285194	83285972	789624	9	80,54,72,42,102,104,120,85,118,	0,7747,7893,8051,8739,12826,14241,19227,19973,
#Partially deleted in new
chr11	83265915	83286085	chr11:83265915-83286085	0	-	83285840	83285972	789624	7	64,54,72,42,102,120,533,	0,7731,7877,8035,8723,14225,19637,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	83273245	83285988	chr11:83273245-83285988	0	-	83274666	83285972	789624	4	455,72,790,116,	0,547,705,12627,
#Partially deleted in new
chr11	83273676	83285968	chr11:83273676-83285968	0	-	83273676	83273676	8553170	5	24,72,42,102,416,	0,116,274,962,11876,
#Partially deleted in new
chr11	83274176	83285964	chr11:83274176-83285964	0	-	83274176	83274176	8553170	3	564,120,92,	0,5964,11696,
#Partially deleted in new
chr11	83274442	83285978	chr11:83274442-83285978	0	-	83274442	83274442	8553170	4	298,104,120,106,	0,4283,5698,11430,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	83286127	83423516	chr11:83286127-83423516	3	+	83286127	83286127	8553170	5	420,62,55,158,1948,	0,15651,54339,133408,135441,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	83286358	83305124	chr11:83286358-83305124	0	+	83286358	83286358	8553170	3	189,62,202,	0,15420,18564,
#Deleted in new
chr11	83328925	83329246	chr11:83328925-83329246	7	+	83328925	83328925	16724991	1	321,	0,
#Deleted in new
chr11	83386987	83387102	chr11:83386987-83387102	3	+	83386987	83386987	8553170	1	115,	0,
#Partially deleted in new
chr11	83455011	84317339	chr11:83455011-84317339	1	-	83459817	84317145	0	22	4913,92,110,173,102,51,100,76,177,115,103,157,69,156,139,145,137,170,125,51,54,515,	0,6990,11696,14189,16614,17715,29117,77696,86670,178199,331678,378602,419408,475316,507873,510312,525494,604303,643911,708449,796226,861813,
#Partially deleted in new
chr11	83455011	84923589	chr11:83455011-84923589	1	-	83459817	84923118	0	23	4913,92,110,173,102,51,100,76,177,115,103,157,69,156,139,145,137,170,125,51,54,162,513,	0,6990,11696,14189,16614,17715,29117,77696,86670,178199,331678,378602,419408,475316,507873,510312,525494,604303,643911,708449,796226,1079558,1468065,
#Partially deleted in new
chr11	83455176	83682394	chr11:83455176-83682394	1	-	83459817	83633281	0	11	4748,92,110,173,102,51,46,76,177,115,237,	0,6825,11531,14024,16449,17550,28076,77531,86505,178034,226981,
#Partially deleted in new
chr11	83457918	85627270	chr11:83457918-85627270	1	-	83459817	85598696	0	28	2006,92,110,173,102,51,100,76,177,115,103,157,69,156,139,145,137,170,125,51,54,162,75,96,146,132,167,53,	0,4083,8789,11282,13707,14808,26210,74789,83763,175292,328771,375695,416501,472409,504966,507405,522587,601396,641004,705542,793319,1076651,1653742,1696637,1827301,2140738,2168668,2169299,
#Partially deleted in new
chr11	83457918	84720915	chr11:83457918-84720915	1	-	83459817	84720397	8553170	23	2006,92,110,173,102,51,100,76,177,115,103,157,69,156,139,145,137,170,125,51,54,162,620,	0,4083,8789,11282,13707,14808,26210,74789,83763,175292,328771,375695,416501,472409,504966,507405,522587,601396,641004,705542,793319,1076651,1262377,
#Partially deleted in new
chr11	83457918	85627270	chr11:83457918-85627270	3	-	83459817	85626617	8553170	28	2006,92,110,173,102,51,100,76,177,115,103,157,69,156,139,145,137,170,125,51,54,162,75,96,146,132,155,53,	0,4083,8789,11282,13707,14808,26210,74789,83763,175292,328771,375695,416501,472409,504966,507405,522587,601396,641004,705542,793319,1076651,1653742,1696637,1827301,2140738,2168680,2169299,
#Partially deleted in new
chr11	83459065	84273280	chr11:83459065-84273280	1	-	83459817	84273255	0	20	859,92,110,173,102,51,46,76,177,115,103,157,69,139,145,137,170,125,51,130,	0,2936,7642,10135,12560,13661,24187,73642,82616,174145,327624,374548,415354,503819,506258,521440,600249,639857,704395,814085,
#Partially deleted in new
chr11	83459345	83682425	chr11:83459345-83682425	1	-	83459817	83633281	789624	12	579,92,110,173,102,51,42,46,76,177,115,268,	0,2656,7362,9855,12280,13381,21026,23907,73362,82336,173865,222812,
#Partially deleted in new
chr11	83459421	84273188	chr11:83459421-84273188	0	-	83459817	84273188	789624	22	503,92,110,173,102,51,46,76,177,115,103,157,69,156,139,145,137,170,125,51,54,38,	0,2580,7286,9779,12204,13305,23831,73286,82260,173789,327268,374192,414998,470906,503463,505902,521084,599893,639501,704039,791816,813729,
#Partially deleted in new
chr11	83459507	83462149	chr11:83459507-83462149	0	-	83459507	83459507	8553170	2	417,148,	0,2494,
#Partially deleted in new
chr11	83459608	84923180	chr11:83459608-84923180	1	-	83459817	84923118	789624	24	316,92,110,173,102,51,42,46,76,177,115,103,157,69,156,139,145,137,170,125,51,54,162,104,	0,2393,7099,9592,12017,13118,20763,23644,73099,82073,173602,327081,374005,414811,470719,503276,505715,520897,599706,639314,703852,791629,1074961,1463468,
#Partially deleted in new
chr11	83459788	84923421	chr11:83459788-84923421	1	-	83459817	84923118	789624	23	136,92,110,173,102,51,46,76,177,115,103,157,69,156,139,145,137,170,125,51,54,162,345,	0,2213,6919,9412,11837,12938,23464,72919,81893,173422,326901,373825,414631,470539,503096,505535,520717,599526,639134,703672,791449,1074781,1463288,
#Partially deleted in new
chr11	83461541	84273280	chr11:83461541-84273280	1	-	83461972	84273255	789624	21	552,110,173,102,51,100,76,177,115,103,157,69,156,139,145,137,170,125,51,54,130,	0,5166,7659,10084,11185,22587,71166,80140,171669,325148,372072,412878,468786,501343,503782,518964,597773,637381,701919,789696,811609,
#Partially deleted in new
chr11	83462067	83484213	chr11:83462067-83484213	0	-	83462067	83484213	789624	5	26,110,173,102,85,	0,4640,7133,9558,22061,
#Partially deleted in new
chr11	83469286	83682298	chr11:83469286-83682298	0	-	83469286	83633281	789624	8	87,102,51,100,76,177,115,141,	0,2339,3440,14842,63421,72395,163924,212871,
#Partially deleted in new
chr11	83472770	83682006	chr11:83472770-83682006	0	-	83472770	83633281	789624	5	4,76,177,115,175,	0,59937,68911,160440,209061,
#Partially deleted in new
chr11	83480392	83682269	chr11:83480392-83682269	1	-	83480629	83633281	789624	6	257,46,76,177,115,112,	0,2860,52315,61289,152818,201765,
#Partially deleted in new
chr11	83486154	83724956	chr11:83486154-83724956	1	-	83486227	83724892	789624	5	97,76,177,115,101,	0,46553,55527,147056,238701,
#Partially deleted in new
chr11	83532750	83725403	chr11:83532750-83725403	0	-	83532750	83633281	789624	4	33,177,115,234,	0,8931,100460,192419,
#Partially deleted in new
chr11	83541690	83724922	chr11:83541690-83724922	0	-	83541690	83651881	789624	4	168,115,92,67,	0,91520,110148,183165,
#Partially deleted in new
chr11	83631187	84923396	chr11:83631187-84923396	0	-	83631187	83631187	8553170	14	2138,103,157,69,156,139,145,137,170,125,51,54,162,320,	0,155502,202426,243232,299140,331697,334136,349318,428127,467735,532273,620050,903382,1291889,
#Partially deleted in new
chr11	83632872	83682401	chr11:83632872-83682401	0	-	83632872	83632872	8553170	2	453,244,	0,49285,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	83643601	83648043	chr11:83643601-83648043	1	+	83643601	83643601	8553170	5	113,83,87,91,171,	0,2153,3402,3902,4271,
#Partially deleted in new
chr11	83645729	83725390	chr11:83645729-83725390	3	+	83645729	83645729	8553170	8	108,91,77,55,143,79,156,199,	0,1774,38719,46291,47199,48002,75100,79462,
#Partially deleted in new
chr11	83645783	83652010	chr11:83645783-83652010	1	+	83645783	83645783	8553170	3	54,91,431,	0,1720,5796,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	83646601	83648043	chr11:83646601-83648043	0	+	83646601	83646601	8553170	3	489,91,171,	0,902,1271,
#Partially deleted in new
chr11	83786440	84317339	chr11:83786440-84317339	1	-	83786657	84317145	789624	12	352,157,69,156,139,145,137,170,125,51,54,515,	0,47173,87979,143887,176444,178883,194065,272874,312482,377020,464797,530384,
#Deleted in new
chr11	83789976	83791578	chr11:83789976-83791578	7	-	83789976	83789976	16724991	1	1602,	0,
#Deleted in new
chr11	83814570	83815263	chr11:83814570-83815263	7	-	83814570	83814570	16724991	1	693,	0,
#Partially deleted in new
chr11	83962962	84167004	chr11:83962962-84167004	0	-	83962962	84166964	789624	7	61,145,137,170,125,51,49,	0,2361,17543,96352,135960,200498,203993,
#Partially deleted in new
chr11	83980560	84167002	chr11:83980560-84167002	0	-	83980560	83980560	8553170	5	82,170,125,51,175,	0,78754,118362,182900,186267,
#Partially deleted in new
chr11	84059434	84273280	chr11:84059434-84273280	0	-	84272291	84273255	789624	6	50,125,51,54,159,130,	0,39488,104026,191803,212707,213716,
#Partially deleted in new
chr11	84098994	84437809	chr11:84098994-84437809	0	-	84098994	84098994	8553170	4	53,51,54,422,	0,64466,152243,338393,
#Partially deleted in new
chr11	84534612	85133123	chr11:84534612-85133123	0	-	84534612	85132797	789624	3	119,75,356,	0,577048,598155,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	84545130	84546846	chr11:84545130-84546846	7	-	84545130	84545130	16724991	2	634,333,	0,1383,
#Deleted in new
chr11	84639992	84640565	chr11:84639992-84640565	7	+	84639992	84639992	16724991	1	573,	0,
#Partially deleted in new
chr11	84686799	84923137	chr11:84686799-84923137	0	-	84686799	84686799	8553170	2	478,61,	0,236277,
#Partially deleted in new
chr11	84720825	84800701	chr11:84720825-84800701	3	+	84720825	84720825	8553170	4	56,58,66,171,	0,41285,42464,79705,
#Deleted in new
chr11	84887206	84887419	chr11:84887206-84887419	3	+	84887206	84887206	8553170	1	213,	0,
#Deleted in new
chr11	84890743	84890961	chr11:84890743-84890961	3	+	84890743	84890743	8553170	1	218,	0,
#Partially deleted in new
chr11	84936688	84955705	chr11:84936688-84955705	3	+	84936688	84936688	8553170	2	53,366,	0,18651,
#Deleted in new
chr11	84997225	84997768	chr11:84997225-84997768	7	-	84997225	84997225	16724991	1	543,	0,
#Deleted in new
chr11	85020784	85021655	chr11:85020784-85021655	7	-	85020784	85020784	16724991	1	871,	0,
#Deleted in new
chr11	85336074	85336572	chr11:85336074-85336572	7	-	85336074	85336074	16724991	1	498,	0,
#Deleted in new
chr11	85452281	85453698	chr11:85452281-85453698	7	-	85452281	85452281	16724991	1	1417,	0,
#Partially deleted in new
chr11	85469337	85627922	chr11:85469337-85627922	1	-	85469714	85626617	8553170	4	385,132,155,705,	0,129319,157261,157880,
#Partially deleted in new
chr11	85469337	85525022	chr11:85469337-85525022	0	-	85469337	85469337	8553170	2	385,32,	0,55653,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	85509937	85510044	chr11:85509937-85510044	3	+	85509937	85509937	8553170	1	107,	0,
#Partially deleted in new
chr11	85598656	85627749	chr11:85598656-85627749	0	-	85598656	85598656	8553170	4	132,145,155,61,	0,26450,27942,29032,
#Partially deleted in new
chr11	85628572	85636539	chr11:85628572-85636539	1	+	85631695	85636229	789624	6	116,172,122,194,112,494,	0,2572,3114,5513,7094,7473,
#Partially deleted in new
chr11	85628584	85636502	chr11:85628584-85636502	3	+	85628607	85636229	789624	5	104,122,194,112,457,	0,3102,5501,7082,7461,
#Partially deleted in new
chr11	85628592	85636210	chr11:85628592-85636210	0	+	85628607	85629182	789624	6	96,131,122,194,112,165,	0,539,3094,5493,7074,7453,
#Partially deleted in new
chr11	85628592	85635760	chr11:85628592-85635760	0	+	85628607	85631186	789624	5	96,172,122,91,94,	0,2552,3094,5493,7074,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	85628596	85635087	chr11:85628596-85635087	0	+	85628607	85631186	789624	4	92,172,122,1002,	0,2548,3090,5489,
#Partially deleted in new
chr11	85628596	85636128	chr11:85628596-85636128	0	+	85628607	85629182	789624	6	92,72,122,194,112,83,	0,535,3090,5489,7070,7449,
#Partially deleted in new
chr11	85628601	85636536	chr11:85628601-85636536	1	+	85628607	85635782	789624	4	87,122,194,870,	0,3085,5484,7065,
#Partially deleted in new
chr11	85628603	85636507	chr11:85628603-85636507	0	+	85628607	85634181	789624	4	85,194,112,462,	0,5482,7063,7442,
#Partially deleted in new
chr11	85628604	85636510	chr11:85628604-85636510	0	+	85628607	85631186	789624	6	84,172,122,194,112,465,	0,2540,3082,5481,7062,7441,
#Partially deleted in new
chr11	85628618	85631791	chr11:85628618-85631791	0	+	85628618	85629182	789624	4	70,131,172,105,	0,513,2526,3068,
#Partially deleted in new
chr11	85628629	85636159	chr11:85628629-85636159	0	+	85628629	85636159	789624	4	59,91,112,114,	0,5456,7037,7416,
#Partially deleted in new
chr11	85647966	85656509	chr11:85647966-85656509	0	+	85650255	85654074	789624	5	123,93,194,115,201,	0,2282,6074,7627,8342,
#Partially deleted in new
chr11	85647976	85656542	chr11:85647976-85656542	1	+	85654186	85656501	789624	4	113,194,115,234,	0,6086,7617,8332,
#Partially deleted in new
chr11	85647986	85656547	chr11:85647986-85656547	0	+	85650255	85655623	789624	5	103,93,172,115,239,	0,2262,6076,7607,8322,
#Partially deleted in new
chr11	85647987	85656543	chr11:85647987-85656543	3	+	85650255	85656501	789624	5	102,93,194,115,235,	0,2261,6075,7606,8321,
#Partially deleted in new
chr11	85648020	85656543	chr11:85648020-85656543	1	+	85654186	85656501	789624	5	69,30,194,115,235,	0,2291,6042,7573,8288,
#Deleted in new
chr11	85655408	85656466	chr11:85655408-85656466	0	+	85655408	85655408	8553170	2	300,158,	0,900,
#Deleted in new
chr11	85659707	85665102	chr11:85659707-85665102	0	-	85663810	85664875	789624	2	2750,1579,	0,3816,
#Deleted in new
chr11	85660148	85664104	chr11:85660148-85664104	0	-	85660148	85660148	8553170	3	449,69,581,	0,2240,3375,
#Deleted in new
chr11	85660152	85664653	chr11:85660152-85664653	0	-	85663585	85664653	789624	4	445,69,78,839,	0,2236,3371,3662,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	85660167	85682863	chr11:85660167-85682863	0	-	85660167	85660167	8553170	4	430,69,78,147,	0,2221,3356,22549,
#Partially deleted in new
chr11	85660251	85682908	chr11:85660251-85682908	1	-	85660592	85682908	789624	4	346,69,78,52,	0,2137,3272,22605,
#Deleted in new
chr11	85660334	85665102	chr11:85660334-85665102	0	-	85663585	85664875	789624	4	1415,69,78,1288,	0,2054,3189,3480,
#Deleted in new
chr11	85660334	85664189	chr11:85660334-85664189	0	-	85663585	85664189	789624	5	263,113,69,78,375,	0,1302,2054,3189,3480,
#Deleted in new
chr11	85661065	85665102	chr11:85661065-85665102	3	-	85663810	85664875	789624	1	4037,	0,
#Deleted in new
chr11	85661952	85663859	chr11:85661952-85663859	0	-	85661952	85661952	8553170	3	505,78,162,	0,1571,1745,
#Deleted in new
chr11	85684865	85686277	chr11:85684865-85686277	3	-	85685005	85686130	789624	1	1412,	0,
#Partially deleted in new
chr11	85694223	85758069	chr11:85694223-85758069	1	-	85695194	85757725	0	18	1117,206,100,79,171,103,170,120,95,54,102,72,804,115,82,136,152,445,	0,1959,3755,6291,10634,13205,15107,16889,20189,24566,26634,33672,39715,42277,43351,51413,54048,63401,
#Partially deleted in new
chr11	85694223	85811159	chr11:85694223-85811159	3	-	85695194	85757725	0	19	1117,206,100,79,171,103,170,95,48,54,102,72,804,112,82,136,152,490,206,	0,1959,3755,6291,10634,13205,15107,20189,23259,24566,26634,33672,39715,42277,43351,51413,54048,63401,116730,
#Partially deleted in new
chr11	85694274	85811129	chr11:85694274-85811129	1	-	85695194	85757725	0	19	1066,206,100,79,171,103,170,120,95,54,102,72,804,115,82,136,152,490,176,	0,1908,3704,6240,10583,13154,15056,16838,20138,24515,26583,33621,39664,42226,43300,51362,53997,63350,116679,
#Partially deleted in new
chr11	85694274	85726468	chr11:85694274-85726468	0	-	85695194	85726468	789624	13	1066,206,100,79,171,103,170,120,95,48,54,102,2437,	0,1908,3704,6240,10583,13154,15056,16838,20138,23208,24515,26583,29757,
#Partially deleted in new
chr11	85694287	85728028	chr11:85694287-85728028	0	-	85694287	85694287	8553170	12	1053,206,100,79,171,103,170,120,95,54,102,3997,	0,1895,3691,6227,10570,13141,15043,16825,20125,24502,26570,29744,
#Partially deleted in new
chr11	85694287	85715137	chr11:85694287-85715137	1	-	85695194	85714448	0	9	1053,206,100,79,171,103,170,120,725,	0,1895,3691,6227,10570,13141,15043,16825,20125,
#Partially deleted in new
chr11	85694290	85726468	chr11:85694290-85726468	0	-	85717718	85726468	789624	13	1050,206,100,79,171,103,170,120,95,244,54,102,2437,	0,1892,3688,6224,10567,13138,15040,16822,20122,23192,24499,26567,29741,
#Partially deleted in new
chr11	85694725	85719168	chr11:85694725-85719168	1	-	85695194	85718792	0	9	615,206,100,79,171,103,170,120,379,	0,1457,3253,5789,10132,12703,14605,16387,24064,
#Partially deleted in new
chr11	85694725	85719138	chr11:85694725-85719138	1	-	85695194	85714448	0	12	615,206,100,79,171,103,170,120,95,48,54,149,	0,1457,3253,5789,10132,12703,14605,16387,19687,22757,24064,24264,
#Partially deleted in new
chr11	85694725	85724713	chr11:85694725-85724713	0	-	85695194	85724713	789624	12	615,206,100,79,171,103,170,95,48,54,102,682,	0,1457,3253,5789,10132,12703,14605,19687,22757,24064,26132,29306,
#Partially deleted in new
chr11	85694741	85758003	chr11:85694741-85758003	1	-	85695194	85757725	0	18	599,206,100,79,171,103,170,120,95,54,102,72,804,112,82,136,152,379,	0,1441,3237,5773,10116,12687,14589,16371,19671,24048,26116,33154,39197,41759,42833,50895,53530,62883,
#Partially deleted in new
chr11	85694813	85700623	chr11:85694813-85700623	0	-	85694813	85694813	8553170	4	527,206,100,109,	0,1369,3165,5701,
#Deleted in new
chr11	85694995	85696494	chr11:85694995-85696494	0	-	85694995	85694995	8553170	2	345,312,	0,1187,
#Partially deleted in new
chr11	85695034	85719098	chr11:85695034-85719098	1	-	85695194	85714448	0	11	306,206,100,79,171,103,170,95,48,54,109,	0,1148,2944,5480,9823,12394,14296,19378,22448,23755,23955,
#Partially deleted in new
chr11	85695085	85811141	chr11:85695085-85811141	1	-	85695194	85748380	0	19	255,206,100,79,171,103,170,120,95,48,54,102,72,804,112,82,136,152,188,	0,1097,2893,5429,9772,12343,14245,16027,19327,22397,23704,25772,32810,38853,41415,42489,50551,53186,115868,
#Partially deleted in new
chr11	85695194	85757725	chr11:85695194-85757725	1	-	85695194	85757725	0	18	146,206,100,79,171,103,170,95,48,54,102,72,804,112,82,136,152,101,	0,988,2784,5320,9663,12234,14136,19218,22288,23595,25663,32701,38744,41306,42380,50442,53077,62430,
#Partially deleted in new
chr11	85695194	85757725	chr11:85695194-85757725	1	-	85695194	85757725	789624	18	146,206,100,79,171,103,170,120,95,54,102,3936,804,115,82,136,152,101,	0,988,2784,5320,9663,12234,14136,15918,19218,23595,25663,28837,38744,41306,42380,50442,53077,62430,
#Partially deleted in new
chr11	85696182	85705255	chr11:85696182-85705255	0	-	85696182	85696182	8553170	4	206,100,79,398,	0,1796,4332,8675,
#Partially deleted in new
chr11	85704857	85719228	chr11:85704857-85719228	0	-	85704857	85714448	789624	7	171,103,170,95,48,54,42,	0,2571,4473,9555,12625,13932,14329,
#Partially deleted in new
chr11	85704857	85719082	chr11:85704857-85719082	0	-	85704857	85717496	789624	6	171,103,47,37,48,293,	0,2571,4473,9555,12625,13932,
#Partially deleted in new
chr11	85704991	85718420	chr11:85704991-85718420	0	-	85704991	85714448	789624	6	37,103,170,120,95,186,	0,2437,4339,6121,9421,13243,
#Partially deleted in new
chr11	85709346	85719377	chr11:85709346-85719377	0	-	85709346	85714448	789624	5	154,120,95,54,317,	0,1766,5066,9443,9714,
#Partially deleted in new
chr11	85709447	85716661	chr11:85709447-85716661	0	-	85709447	85714448	789624	4	53,120,95,315,	0,1665,4965,6899,
#Partially deleted in new
chr11	85709466	85718488	chr11:85709466-85718488	0	-	85709466	85714448	789624	6	34,120,95,82,48,254,	0,1646,4946,6880,8016,8768,
#Deleted in new
chr11	85714427	85719150	chr11:85714427-85719150	0	-	85714427	85714448	789624	4	80,96,48,361,	0,2617,3055,4362,
#Deleted in new
chr11	85714435	85719180	chr11:85714435-85719180	0	-	85714435	85714435	8553170	3	72,89,391,	0,1907,4354,
#Deleted in new
chr11	85714478	85719168	chr11:85714478-85719168	0	-	85714478	85714478	8553170	3	29,148,379,	0,1802,4311,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	85733594	85757745	chr11:85733594-85757745	0	-	85733594	85733594	8553170	6	1148,112,82,136,152,121,	0,2906,3980,12042,14677,24030,
#Partially deleted in new
chr11	85757759	85811140	chr11:85757759-85811140	0	-	85757759	85757759	8553170	2	310,187,	0,53194,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	85852556	85854943	chr11:85852556-85854943	3	-	85852556	85852556	8553170	1	2387,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	85855100	85920021	chr11:85855100-85920021	3	+	85865123	85919510	789624	12	484,123,85,163,168,92,69,122,93,80,206,673,	0,9995,18110,27412,31099,40192,43846,56180,57548,60318,60927,64248,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	85855396	85920021	chr11:85855396-85920021	1	+	85865123	85919510	789624	11	188,123,85,163,168,92,69,122,80,206,673,	0,9699,17814,27116,30803,39896,43550,55884,60022,60631,63952,
#Partially deleted in new
chr11	85873209	85915442	chr11:85873209-85915442	0	+	85873209	85873209	8553170	5	86,92,69,122,24,	0,22083,25737,38071,42209,
#Partially deleted in new
chr11	85873230	85919583	chr11:85873230-85919583	0	+	85873230	85919510	789624	8	65,163,92,69,122,80,203,235,	0,9282,22062,25716,38050,42188,42800,46118,
#Partially deleted in new
chr11	85934736	85935663	chr11:85934736-85935663	7	+	85934736	85934736	16724991	1	927,	0,
#Partially deleted in new
chr11	85957683	86069059	chr11:85957683-86069059	1	-	85959045	86068780	789624	20	1377,105,60,24,100,31,132,108,104,137,124,86,42,107,112,94,103,76,143,409,	0,17024,18939,20386,23445,24061,24188,26182,39142,42959,43351,45682,49858,53346,54597,57186,64683,68608,73785,110967,
#Partially deleted in new
chr11	85957687	86069097	chr11:85957687-86069097	1	-	85959045	86068780	789624	20	1373,105,60,100,31,132,108,129,104,137,124,86,42,107,112,94,103,76,143,447,	0,17020,18935,23441,24057,24184,26178,32562,39138,42955,43347,45678,49854,53342,54593,57182,64679,68604,73781,110963,
#Partially deleted in new
chr11	85958754	85990258	chr11:85958754-85990258	0	-	85960684	85990258	789624	10	306,103,105,60,24,100,31,117,108,9,	0,1920,15953,17868,19315,22374,22990,23117,25111,31495,
#Partially deleted in new
chr11	85958810	85977005	chr11:85958810-85977005	0	-	85958810	85958810	8553170	3	250,105,383,	0,15897,17812,
#Partially deleted in new
chr11	85958813	86068929	chr11:85958813-86068929	3	-	85959045	86068780	789624	20	247,105,60,100,31,132,108,150,104,137,124,86,42,107,112,94,103,76,143,279,	0,15894,17809,22315,22931,23058,25052,31436,38012,41829,42221,44552,48728,52216,53467,56056,63553,67478,72655,109837,
#Partially deleted in new
chr11	85958816	86068929	chr11:85958816-86068929	1	-	86022424	86068780	789624	19	244,105,60,100,31,132,108,150,104,137,124,86,42,107,112,94,103,143,279,	0,15891,17806,22312,22928,23055,25049,31433,38009,41826,42218,44549,48725,52213,53464,56053,63550,72652,109834,
#Partially deleted in new
chr11	85958817	86001158	chr11:85958817-86001158	0	-	85959045	86001158	789624	11	243,105,60,24,100,31,117,108,104,137,124,	0,15890,17805,19252,22311,22927,23054,25048,38008,41825,42217,
#Partially deleted in new
chr11	85958838	86069882	chr11:85958838-86069882	1	-	85959045	86031588	789624	19	222,105,60,100,31,132,108,104,137,124,86,42,107,112,94,103,76,143,163,	0,15869,17784,22290,22906,23033,25027,37987,41804,42196,44527,48703,52191,53442,56031,63528,67453,72630,110881,
#Partially deleted in new
chr11	85958882	85983900	chr11:85958882-85983900	0	-	85959045	85983900	789624	6	178,105,100,31,117,35,	0,15825,22246,22862,22989,24983,
#Partially deleted in new
chr11	85958986	86068780	chr11:85958986-86068780	1	-	85959045	86068780	789624	19	74,105,100,31,132,108,150,104,137,124,86,42,107,112,94,103,76,143,130,	0,15721,22142,22758,22885,24879,31263,37839,41656,42048,44379,48555,52043,53294,55883,63380,67305,72482,109664,
#Partially deleted in new
chr11	85959022	86001141	chr11:85959022-86001141	0	-	85959045	86001141	789624	8	38,100,31,132,108,104,137,107,	0,22106,22722,22849,24843,37803,41620,42012,
#Partially deleted in new
chr11	85959036	85996929	chr11:85959036-85996929	0	-	85959045	85996929	789624	10	24,105,60,24,100,31,117,108,129,104,	0,15671,17586,19033,22092,22708,22835,24829,31213,37789,
#Partially deleted in new
chr11	85974781	85978715	chr11:85974781-85978715	0	-	85974781	85974781	8553170	3	31,60,646,	0,1841,3288,
#Partially deleted in new
chr11	85976648	86001158	chr11:85976648-86001158	0	-	85976648	86001158	789624	9	34,100,31,117,108,150,104,137,124,	0,4480,5096,5223,7217,13601,20177,23994,24386,
#Partially deleted in new
chr11	85981183	85982185	chr11:85981183-85982185	0	-	85981183	85981183	8553170	3	45,31,314,	0,561,688,
#Partially deleted in new
chr11	86000680	86068797	chr11:86000680-86068797	0	-	86014946	86068780	789624	8	99,124,86,42,107,112,94,147,	0,354,2685,6861,10349,11600,14189,67970,
#Partially deleted in new
chr11	86001030	86003778	chr11:86001030-86003778	0	-	86001030	86001030	8553170	2	128,413,	0,2335,
#Partially deleted in new
chr11	86007368	86022469	chr11:86007368-86022469	0	-	86007368	86007368	8553170	5	215,107,112,94,103,	0,3661,4912,7501,14998,
#Partially deleted in new
chr11	86011111	86068984	chr11:86011111-86068984	0	-	86014946	86068780	789624	4	25,112,94,334,	0,1169,3758,57539,
#Partially deleted in new
chr11	86012280	86069811	chr11:86012280-86069811	0	-	86012280	86068678	789624	7	112,94,103,76,143,83,92,	0,2589,10086,14011,19188,56370,57439,
#Partially deleted in new
chr11	86012328	86068945	chr11:86012328-86068945	0	-	86022424	86068780	789624	5	64,94,103,143,295,	0,2541,10038,19140,56322,
#Partially deleted in new
chr11	86012342	86069539	chr11:86012342-86069539	0	-	86012342	86031588	789624	6	50,94,103,76,143,82,	0,2527,10024,13949,19126,57115,
#Partially deleted in new
chr11	86014869	86069081	chr11:86014869-86069081	0	-	86014869	86068678	789624	6	94,103,76,143,88,59,	0,7497,11422,16599,53781,54153,
#Partially deleted in new
chr11	86022377	86069311	chr11:86022377-86069311	0	-	86022377	86022377	8553170	6	92,126,76,143,83,66,	0,1038,3914,9091,46273,46868,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	86153226	86153334	chr11:86153226-86153334	3	+	86153226	86153226	8553170	1	108,	0,
#Deleted in new
chr11	86192786	86193482	chr11:86192786-86193482	3	-	86192786	86192786	8553170	2	128,50,	0,646,
#Deleted in new
chr11	86195131	86196266	chr11:86195131-86196266	7	+	86195131	86195131	16724991	1	1135,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	86216595	86216878	chr11:86216595-86216878	3	+	86216595	86216595	8553170	1	283,	0,
#Partially deleted in new
chr11	86244543	86278736	chr11:86244543-86278736	3	+	86245229	86278525	0	12	800,153,93,66,126,82,92,134,106,159,74,338,	0,5752,7604,10678,11843,12971,19628,21539,23912,32436,33374,33855,
#Partially deleted in new
chr11	86244752	86278707	chr11:86244752-86278707	1	+	86245229	86278525	789624	10	591,153,93,66,126,82,92,159,74,309,	0,5543,7395,10469,11634,12762,19419,32227,33165,33646,
#Partially deleted in new
chr11	86245139	86278735	chr11:86245139-86278735	1	+	86245229	86277995	0	11	204,153,93,66,126,82,92,134,106,159,818,	0,5156,7008,10082,11247,12375,19032,20943,23316,31840,32778,
#Partially deleted in new
chr11	86245233	86278361	chr11:86245233-86278361	0	+	86245233	86277995	789624	3	110,159,444,	0,31746,32684,
#Partially deleted in new
chr11	86245267	86277535	chr11:86245267-86277535	0	+	86245267	86245267	8553170	10	76,153,93,66,126,82,92,134,106,556,	0,5028,6880,9954,11119,12247,18904,20815,23188,31712,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	86263944	86268530	chr11:86263944-86268530	0	+	86263944	86263944	8553170	3	319,134,75,	0,2138,4511,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	86263944	86278554	chr11:86263944-86278554	0	+	86263944	86263944	8553170	5	2272,106,159,74,156,	0,4511,13035,13973,14454,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	86276131	86278739	chr11:86276131-86278739	1	+	86277018	86278525	789624	3	1007,74,341,	0,1786,2267,
#Deleted in new
chr11	86277097	86278739	chr11:86277097-86278739	0	+	86277097	86277097	8553170	2	894,341,	0,1301,
#Deleted in new
chr11	86278332	86278398	chr11:86278332-86278398	3	+	86278332	86278332	5263520	1	66,	0,
#Deleted in new
chr11	86283926	86284668	chr11:86283926-86284668	7	+	86283926	86283926	16724991	1	742,	0,
#Deleted in new
chr11	86294759	86295576	chr11:86294759-86295576	7	+	86294759	86294759	16724991	1	817,	0,
#Partially deleted in new
chr11	86302210	86345638	chr11:86302210-86345638	1	+	86302448	86344767	789624	4	268,238,152,1036,	0,4034,35168,42392,
#Partially deleted in new
chr11	86302222	86345931	chr11:86302222-86345931	3	+	86302448	86345638	0	5	256,238,152,119,348,	0,4022,35156,42380,43361,
#Partially deleted in new
chr11	86302242	86345791	chr11:86302242-86345791	0	+	86302242	86302242	789624	4	236,152,119,208,	0,35136,42360,43341,
#Partially deleted in new
chr11	86302250	86345229	chr11:86302250-86345229	0	+	86302448	86326523	789624	5	228,238,164,152,627,	0,3994,24262,35128,42352,
#Partially deleted in new
chr11	86302283	86337495	chr11:86302283-86337495	0	+	86302283	86302283	8553170	4	195,174,238,117,	0,1073,3961,35095,
#Partially deleted in new
chr11	86303355	86345663	chr11:86303355-86345663	0	+	86303355	86303355	8553170	6	105,238,152,119,105,80,	0,2889,34023,41247,41738,42228,
#Partially deleted in new
chr11	86306332	86345662	chr11:86306332-86345662	1	+	86306411	86345638	789624	5	82,67,152,119,79,	0,83,31046,38270,39251,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	86324011	86324309	chr11:86324011-86324309	3	-	86324011	86324011	8553170	1	298,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	86343507	86345927	chr11:86343507-86345927	0	+	86343507	86343507	8553170	2	1214,344,	0,2076,
#Partially deleted in new
chr11	86374735	86423108	chr11:86374735-86423108	1	+	86375163	86422715	789624	14	507,62,144,80,122,124,88,144,105,173,79,221,126,535,	0,11315,12780,20598,22885,25942,32878,33391,34525,37651,40053,40357,45192,47838,
#Partially deleted in new
chr11	86374886	86397665	chr11:86374886-86397665	0	+	86375163	86397665	789624	4	356,62,80,45,	0,11164,20447,22734,
#Partially deleted in new
chr11	86374891	86423012	chr11:86374891-86423012	3	+	86375163	86422715	789624	15	351,62,157,257,80,122,124,88,144,105,173,79,221,126,439,	0,11159,12624,17649,20442,22729,25786,32722,33235,34369,37495,39897,40201,45036,47682,
#Partially deleted in new
chr11	86395110	86412438	chr11:86395110-86412438	0	+	86395110	86395110	8553170	4	303,124,105,52,	0,5567,14150,17276,
#Partially deleted in new
chr11	86395151	86409365	chr11:86395151-86409365	0	+	86395151	86395151	8553170	4	262,124,88,105,	0,5526,12462,14109,
#Partially deleted in new
chr11	86395151	86408234	chr11:86395151-86408234	0	+	86395151	86395151	8553170	4	262,124,88,108,	0,5526,12462,12975,
#Partially deleted in new
chr11	86395173	86423109	chr11:86395173-86423109	1	+	86397636	86422715	789624	10	240,122,124,88,105,173,79,221,126,536,	0,2447,5504,12440,14087,17213,19615,19919,24754,27400,
#Partially deleted in new
chr11	86395173	86407677	chr11:86395173-86407677	0	+	86395173	86395173	8553170	4	240,122,124,64,	0,2447,5504,12440,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	86414325	86423106	chr11:86414325-86423106	0	+	86414325	86414325	8553170	3	988,126,533,	0,5602,8248,
#Partially deleted in new
chr11	86419075	86423106	chr11:86419075-86423106	0	+	86419075	86419075	8553170	2	978,533,	0,3498,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	86431589	86622867	chr11:86431589-86622867	3	+	86431589	86431589	8553170	3	44,224,143,	0,829,191135,
#Deleted in new
chr11	86432097	86432575	chr11:86432097-86432575	7	+	86432097	86432097	16724991	1	478,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	86434923	86437282	chr11:86434923-86437282	3	-	86434923	86434923	8553170	1	2359,	0,
#Partially deleted in new
chr11	86441107	86672198	chr11:86441107-86672198	1	-	86441278	86671944	789624	14	333,99,174,143,106,114,98,110,104,162,76,150,134,437,	0,1713,5206,5957,7042,8781,9193,23983,46229,56855,67684,115445,118582,230654,
#Partially deleted in new
chr11	86441109	86672636	chr11:86441109-86672636	3	-	86441278	86671944	789624	15	331,99,174,143,106,114,98,110,104,162,76,150,134,197,313,	0,1711,5204,5955,7040,8779,9191,23981,46227,56853,67682,115443,118580,230652,231214,
#Partially deleted in new
chr11	86441351	86672636	chr11:86441351-86672636	0	-	86441351	86671944	789624	15	89,99,174,143,106,114,98,110,104,162,76,150,134,197,313,	0,1469,4962,5713,6798,8537,8949,23739,45985,56611,67440,115201,118338,230410,230972,
#Partially deleted in new
chr11	86446892	86671965	chr11:86446892-86671965	0	-	86446892	86446892	8553170	11	315,106,114,98,110,104,162,76,150,134,204,	0,1257,2996,3408,18198,40444,51070,61899,109660,112797,224869,
#Partially deleted in new
chr11	86449964	86672636	chr11:86449964-86672636	0	-	86457649	86671944	789624	11	38,98,394,110,104,162,76,150,134,197,313,	0,336,7401,15126,37372,47998,58827,106588,109725,221797,222359,
#Partially deleted in new
chr11	86457578	86498124	chr11:86457578-86498124	0	-	86457578	86457578	8553170	5	181,110,104,62,162,	0,7512,29758,31539,40384,
#Partially deleted in new
chr11	86464081	86672385	chr11:86464081-86672385	1	-	86464081	86559820	789624	9	47,110,104,162,76,150,134,197,88,	0,1009,23255,33881,44710,92471,95608,207680,208216,
#Partially deleted in new
chr11	86556564	86672618	chr11:86556564-86672618	0	-	86556564	86671944	789624	4	138,134,197,345,	0,3125,115197,115709,
#Partially deleted in new
chr11	86667738	86671822	chr11:86667738-86671822	0	-	86667738	86667738	8553170	2	504,61,	0,4023,
#Deleted in new
chr11	86671705	86672428	chr11:86671705-86672428	0	-	86671705	86671944	789624	2	253,131,	0,592,
#Deleted in new
chr11	86671759	86672372	chr11:86671759-86672372	0	-	86671759	86671944	789624	2	199,99,	0,514,
#Deleted in new
chr11	86671761	86672613	chr11:86671761-86672613	0	-	86671761	86671944	789624	2	197,290,	0,562,
#Partially deleted in new
chr11	86703098	86714092	chr11:86703098-86714092	3	+	86703098	86703098	8553170	2	29,403,	0,10591,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	86727354	86765265	chr11:86727354-86765265	3	+	86727354	86727354	8553170	5	168,156,88,59,32,	0,34596,36237,37600,37879,
#Partially deleted in new
chr11	86791058	86808106	chr11:86791058-86808106	0	+	86807643	86808106	789624	2	137,476,	0,16572,
#Deleted in new
chr11	86800239	86811233	chr11:86800239-86811233	3	+	86807643	86808795	789624	2	412,3603,	0,7391,
#Partially deleted in new
chr11	86800520	86952788	chr11:86800520-86952788	0	+	86823387	86939062	789624	5	131,217,107,144,1573,	0,22856,138499,149835,150695,
#Partially deleted in new
chr11	86800520	86952910	chr11:86800520-86952910	1	+	86823387	86951285	789624	3	131,217,1695,	0,22856,150695,
#Partially deleted in new
chr11	86800543	86932893	chr11:86800543-86932893	0	+	86800543	86800543	8553170	3	108,260,199,	0,22790,132151,
#Partially deleted in new
chr11	86800543	86932934	chr11:86800543-86932934	0	+	86800543	86800543	8553170	3	108,217,240,	0,22833,132151,
#Deleted in new
chr11	86821142	86821728	chr11:86821142-86821728	7	-	86821142	86821142	16724991	1	586,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	86823395	86937819	chr11:86823395-86937819	0	+	86823395	86823395	8553170	2	198,5125,	0,109299,
#Deleted in new
chr11	86832539	86833449	chr11:86832539-86833449	7	-	86832539	86832539	16724991	1	910,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	86833067	86837615	chr11:86833067-86837615	3	+	86833067	86833067	8553170	2	395,797,	0,3751,
#Deleted in new
chr11	86857058	86857947	chr11:86857058-86857947	7	-	86857058	86857058	16724991	1	889,	0,
#Partially deleted in new
chr11	86892213	86922104	chr11:86892213-86922104	3	-	86892213	86892213	8553170	3	159,128,869,	0,4199,29022,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	86908989	86912238	chr11:86908989-86912238	3	-	86908989	86908989	8553170	1	3249,	0,
#Partially deleted in new
chr11	86921921	86925037	chr11:86921921-86925037	0	-	86921921	86921921	8553170	2	177,62,	0,3054,
#Partially deleted in new
chr11	86940785	86951407	chr11:86940785-86951407	0	+	86940785	86940785	8553170	3	128,144,192,	0,9570,10430,
#Partially deleted in new
chr11	86940785	86951736	chr11:86940785-86951736	0	+	86940785	86940785	8553170	3	242,144,521,	0,9570,10430,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	86945678	86955391	chr11:86945678-86955391	3	-	86951141	86955085	0	2	6792,591,	0,9122,
#Partially deleted in new
chr11	86955618	87000959	chr11:86955618-87000959	3	+	86955618	86955618	789624	3	94,45,1084,	0,2363,44257,
#Partially deleted in new
chr11	86956090	87000490	chr11:86956090-87000490	0	+	86956090	86956090	8553170	3	170,45,615,	0,1891,43785,
#Partially deleted in new
chr11	87024582	87025777	chr11:87024582-87025777	7	+	87024582	87024582	16724991	2	475,413,	0,782,
#Partially deleted in new
chr11	87037843	87323758	chr11:87037843-87323758	1	+	87038045	87321333	789624	14	343,128,93,34,47,42,147,70,168,64,77,99,68,2558,	0,29850,33679,53518,198794,257938,264452,268092,271661,275581,276627,280293,281466,283357,
#Partially deleted in new
chr11	87037891	87157885	chr11:87037891-87157885	0	+	87037891	87037891	8553170	5	295,128,93,34,545,	0,29802,33631,53470,119449,
#Partially deleted in new
chr11	87037920	87157408	chr11:87037920-87157408	0	+	87038045	87157408	789624	4	266,128,34,68,	0,29773,53441,119420,
#Partially deleted in new
chr11	87037949	87321359	chr11:87037949-87321359	1	+	87038082	87321333	789624	12	142,66,47,42,147,70,168,64,77,99,68,159,	0,119391,198688,257832,264346,267986,271555,275475,276521,280187,281360,283251,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	87037984	87277448	chr11:87037984-87277448	0	+	87038045	87277448	789624	5	202,128,93,34,296,	0,29709,33538,53377,239168,
#Partially deleted in new
chr11	87038006	87322350	chr11:87038006-87322350	3	+	87038045	87321333	789624	15	180,128,93,34,66,47,42,147,70,168,64,77,99,68,1150,	0,29687,33516,53355,119334,198631,257775,264289,267929,271498,275418,276464,280130,281303,283194,
#Partially deleted in new
chr11	87071516	87157408	chr11:87071516-87157408	0	+	87071516	87071516	8553170	3	99,34,68,	0,19845,85824,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	87094733	87096585	chr11:87094733-87096585	7	-	87094733	87094733	16724991	1	1852,	0,
#Deleted in new
chr11	87121057	87121596	chr11:87121057-87121596	3	+	87121057	87121057	8553170	1	539,	0,
#Partially deleted in new
chr11	87258850	87259259	chr11:87258850-87259259	7	-	87258850	87258850	16724991	1	409,	0,
#Partially deleted in new
chr11	87318134	87322350	chr11:87318134-87322350	0	+	87318134	87318134	8553170	3	101,68,1150,	0,1175,3066,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	87319066	87322035	chr11:87319066-87322035	0	+	87319066	87319066	8553170	2	311,835,	0,2134,
#Partially deleted in new
chr11	87323708	87324359	chr11:87323708-87324359	7	-	87323708	87323708	16724991	1	651,	0,
#Partially deleted in new
chr11	87329406	87330052	chr11:87329406-87330052	7	-	87329406	87329406	16724991	1	646,	0,
#Deleted in new
chr11	87480735	87481297	chr11:87480735-87481297	7	-	87480735	87480735	16724991	1	562,	0,
#Deleted in new
chr11	87490143	87491110	chr11:87490143-87491110	3	+	87490143	87490143	8553170	1	967,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	87565993	87566421	chr11:87565993-87566421	3	+	87565993	87565993	8553170	1	428,	0,
#Partially deleted in new
chr11	87606782	87606885	chr11:87606782-87606885	3	+	87606782	87606782	8553170	1	103,	0,
#Partially deleted in new
chr11	87648488	87648549	chr11:87648488-87648549	3	-	87648488	87648488	8553170	1	61,	0,
#Deleted in new
chr11	87718353	87719411	chr11:87718353-87719411	3	-	87718353	87718353	789624	2	173,506,	0,552,
#Deleted in new
chr11	87718666	87721233	chr11:87718666-87721233	3	-	87718666	87718666	8553170	1	2567,	0,
#Deleted in new
chr11	87815034	87816157	chr11:87815034-87816157	7	-	87815034	87815034	16724991	1	1123,	0,
#Deleted in new
chr11	87816223	87816524	chr11:87816223-87816524	7	+	87816223	87816223	16724991	1	301,	0,
#Deleted in new
chr11	87816998	87817567	chr11:87816998-87817567	3	+	87816998	87816998	8553170	1	569,	0,
#Duplicated in new
chr11	87847258	88045608	chr11:87847258-88045608	3	-	87847258	87847258	8553170	4	614,117,74,32,	0,94089,107574,198318,
#Deleted in new
chr11	87879472	87880095	chr11:87879472-87880095	3	-	87879472	87879472	8553170	1	623,	0,
#Deleted in new
chr11	87917947	87917999	chr11:87917947-87917999	7	-	87917947	87917947	16724991	1	52,	0,
#Partially deleted in new
chr11	88050105	88062110	chr11:88050105-88062110	3	+	88050105	88050105	8553170	3	77,63,432,	0,10109,11573,
#Partially deleted in new
chr11	88061773	88098147	chr11:88061773-88098147	3	-	88061773	88061773	8553170	2	252,236,	0,36138,
#Partially deleted in new
chr11	88098590	88115835	chr11:88098590-88115835	3	+	88098590	88098590	8553170	3	138,55,59,	0,16882,17186,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	88099994	88100105	chr11:88099994-88100105	3	+	88099994	88099994	8553170	1	111,	0,
#Partially deleted in new
chr11	88113241	88175467	chr11:88113241-88175467	3	-	88113987	88175384	789624	3	899,281,285,	0,36433,61941,
#Partially deleted in new
chr11	88113463	88175433	chr11:88113463-88175433	0	-	88114123	88175433	789624	2	677,251,	0,61719,
#Partially deleted in new
chr11	88113611	88175434	chr11:88113611-88175434	0	-	88113987	88175434	789624	3	529,281,197,	0,36063,61626,
#Deleted in new
chr11	88165574	88167691	chr11:88165574-88167691	3	-	88165574	88165574	8553170	1	2117,	0,
#Deleted in new
chr11	88176501	88176593	chr11:88176501-88176593	3	+	88176501	88176501	5263520	1	92,	0,
#Partially deleted in new
chr11	88293591	88337787	chr11:88293591-88337787	3	-	88294005	88337672	0	7	917,132,116,156,167,146,287,	0,2541,6938,15571,18796,41345,43909,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	88293787	88299755	chr11:88293787-88299755	0	-	88293787	88293787	8553170	2	721,3623,	0,2345,
#Partially deleted in new
chr11	88296158	88337749	chr11:88296158-88337749	0	-	88296158	88337749	789624	6	106,116,156,167,146,42,	0,4371,13004,16229,38778,41549,
#Partially deleted in new
chr11	88309283	88337740	chr11:88309283-88337740	0	-	88309283	88309283	8553170	4	35,167,146,194,	0,3104,25653,28263,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	88320810	88337761	chr11:88320810-88337761	1	-	88326432	88337672	0	4	5633,85,146,261,	0,7301,14126,16690,
#Deleted in new
chr11	88326085	88328198	chr11:88326085-88328198	0	-	88326376	88328198	789624	2	314,87,	0,2026,
#Partially deleted in new
chr11	88326116	88337733	chr11:88326116-88337733	1	-	88326376	88337672	0	4	283,85,146,233,	0,1995,8820,11384,
#Partially deleted in new
chr11	88326364	88337700	chr11:88326364-88337700	0	-	88326364	88326364	8553170	5	79,88,85,146,200,	0,1564,1747,8572,11136,
#Partially deleted in new
chr11	88334735	88337736	chr11:88334735-88337736	0	-	88334735	88334735	8553170	2	347,236,	0,2765,
#Deleted in new
chr11	88408178	88409223	chr11:88408178-88409223	7	-	88408178	88408178	16724991	1	1045,	0,
#Partially deleted in new
chr11	88504575	89063648	chr11:88504575-89063648	3	-	88508591	89047872	0	9	4929,940,127,169,247,236,250,861,168,	0,62477,86025,92608,100142,148592,345330,542636,558905,
#Partially deleted in new
chr11	88504575	88524054	chr11:88504575-88524054	3	+	88504575	88504575	789624	6	4364,129,101,97,77,53,	0,7175,7488,7676,18315,19426,
#Partially deleted in new
chr11	88507809	89048022	chr11:88507809-89048022	1	-	88508591	89047872	0	8	1695,940,127,169,247,236,250,811,	0,59243,82791,89374,96908,145358,342096,539402,
#Partially deleted in new
chr11	88507809	89048022	chr11:88507809-89048022	1	-	88508591	89047872	0	9	1695,96,940,127,169,247,236,250,811,	0,17499,59243,82791,89374,96908,145358,342096,539402,
#Deleted in new
chr11	88511747	88512361	chr11:88511747-88512361	0	+	88511747	88511747	8553170	2	132,110,	0,504,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	88911935	89047370	chr11:88911935-89047370	0	-	88925791	89047370	789624	4	162,65,64,159,	0,13831,97099,135276,
#Partially deleted in new
chr11	88984701	89065945	chr11:88984701-89065945	1	-	88984702	89047872	789624	4	173,64,861,170,	0,24333,62510,81074,
#Partially deleted in new
chr11	89177451	89295759	chr11:89177451-89295759	3	+	89177953	89295366	789624	5	1321,217,148,182,617,	0,13750,50371,107321,117691,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	89177892	89200611	chr11:89177892-89200611	0	+	89177892	89177892	8553170	3	880,217,349,	0,13309,22370,
#Deleted in new
chr11	89283766	89295308	chr11:89283766-89295308	0	+	89283766	89283766	8553170	3	182,182,166,	0,1006,11376,
#Deleted in new
chr11	89293744	89294246	chr11:89293744-89294246	7	-	89293744	89293744	16724991	1	502,	0,
#Deleted in new
chr11	89297716	89298199	chr11:89297716-89298199	3	+	89297716	89297716	8553170	1	483,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	89300708	89301477	chr11:89300708-89301477	3	-	89300708	89300708	8553170	1	769,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr11	89324355	89492224	chr11:89324355-89492224	1	-	89326755	89490538	789624	18	2521,101,69,109,120,82,61,63,165,217,81,73,28,98,85,111,96,104,	0,11489,13091,15707,17718,30606,49076,75661,75859,77970,97546,108428,116332,119779,125084,127429,166102,167765,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr11	89325367	89491131	chr11:89325367-89491131	1	-	89326755	89490538	789624	18	1509,101,69,109,120,82,61,63,165,217,81,73,28,98,85,111,96,279,	0,10477,12079,14695,16706,29594,48064,74649,74847,76958,96534,107416,115320,118767,124072,126417,165090,165485,
#Partially deleted in new
chr11	89326298	89491328	chr11:89326298-89491328	1	-	89326755	89491246	789624	17	578,101,69,109,82,61,63,165,217,81,73,28,98,85,111,96,139,	0,9546,11148,13764,28663,47133,73718,73916,76027,95603,106485,114389,117836,123141,125486,164159,164891,
#Partially deleted in new
chr11	89326343	89491485	chr11:89326343-89491485	3	-	89326755	89491246	789624	18	533,101,69,109,120,82,61,63,165,217,81,73,28,98,85,111,96,296,	0,9501,11103,13719,15730,28618,47088,73673,73871,75982,95558,106440,114344,117791,123096,125441,164114,164846,
#Partially deleted in new
chr11	89326343	89491360	chr11:89326343-89491360	1	-	89326755	89491246	789624	12	533,101,69,109,81,73,28,98,85,111,96,171,	0,9501,11103,13719,95558,106440,114344,117791,123096,125441,164114,164846,
#Partially deleted in new
chr11	89326346	89498187	chr11:89326346-89498187	1	-	89326755	89490538	789624	19	530,101,69,109,120,82,61,63,165,217,81,73,28,98,85,111,96,99,191,	0,9498,11100,13716,15727,28615,47085,73670,73868,75979,95555,106437,114341,117788,123093,125438,164111,165774,171650,
#Partially deleted in new
chr11	89326346	89492190	chr11:89326346-89492190	1	-	89326755	89490538	789624	17	530,101,69,109,82,61,63,165,217,81,73,28,98,85,111,96,70,	0,9498,11100,13716,28615,47085,73670,73868,75979,95555,106437,114341,117788,123093,125438,164111,165774,
#Partially deleted in new
chr11	89326360	89336083	chr11:89326360-89336083	0	-	89326360	89326360	8553170	2	516,239,	0,9484,
#Partially deleted in new
chr11	89326415	89491328	chr11:89326415-89491328	1	-	89326755	89432833	789624	14	461,101,69,46,120,82,61,63,165,217,81,73,96,139,	0,9429,11031,13710,15658,28546,47016,73601,73799,75910,95486,106368,164042,164774,
#Partially deleted in new
chr11	89326566	89490732	chr11:89326566-89490732	1	-	89326755	89490684	789624	17	310,101,69,109,120,82,61,63,165,217,81,73,28,98,85,111,126,	0,9278,10880,13496,15507,28395,46865,73450,73648,75759,95335,106217,114121,117568,122873,125218,164040,
#Partially deleted in new
chr11	89326755	89491246	chr11:89326755-89491246	1	-	89326755	89491246	789624	9	121,101,69,109,120,82,61,96,57,	0,9089,10691,13307,15318,28206,46676,163702,164434,
#Partially deleted in new
chr11	89326755	89491357	chr11:89326755-89491357	0	-	89373446	89491246	789624	15	121,101,69,109,120,82,61,81,73,28,98,85,111,96,168,	0,9089,10691,13307,15318,28206,46676,95146,106028,113932,117379,122684,125029,163702,164434,
#Partially deleted in new
chr11	89326755	89491246	chr11:89326755-89491246	1	-	89326755	89491246	789624	8	121,101,69,109,82,61,96,57,	0,9089,10691,13307,28206,46676,163702,164434,
#Partially deleted in new
chr11	89443420	89491394	chr11:89443420-89491394	0	-	89443420	89443420	8553170	5	812,85,111,96,205,	0,6019,8364,47037,47769,
#Partially deleted in new
chr11	89488905	89491565	chr11:89488905-89491565	1	-	89488981	89491246	789624	3	88,96,376,	0,1552,2284,
#Deleted in new
chr11	89498747	89499198	chr11:89498747-89499198	7	-	89498747	89498747	16724991	1	451,	0,
#Deleted in new
chr11	89533644	89534043	chr11:89533644-89534043	3	-	89533644	89533644	8553170	1	399,	0,
#Deleted in new
chr11	89545127	89545744	chr11:89545127-89545744	3	+	89545127	89545127	8553170	1	617,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	89548129	89548795	chr11:89548129-89548795	3	-	89548129	89548129	8553170	1	666,	0,
#Partially deleted in new
chr11	89556859	89557205	chr11:89556859-89557205	3	+	89556859	89556859	8553170	1	346,	0,
#Deleted in new
chr11	89576912	89577652	chr11:89576912-89577652	3	+	89576912	89576912	8553170	1	740,	0,
#Partially deleted in new
chr11	89639236	89698599	chr11:89639236-89698599	7	+	89639236	89639236	16724991	18	106,187,102,126,187,94,99,86,120,83,64,68,92,91,265,82,93,190,	0,5766,13259,19382,20301,22913,30168,31153,32650,34850,36868,41372,48110,49347,51645,52210,57396,59173,
#Partially deleted in new
chr11	89659296	89698718	chr11:89659296-89698718	5	+	89659296	89659296	16724991	14	428,94,99,86,120,83,64,68,92,91,265,82,93,309,	0,2853,10108,11093,12590,14790,16808,21312,28050,29287,31585,32150,37336,39113,
#Deleted in new
chr11	89700763	89701325	chr11:89700763-89701325	7	+	89700763	89700763	16724991	1	562,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	89704163	89704658	chr11:89704163-89704658	3	+	89704163	89704163	8553170	1	495,	0,
#Partially deleted in new
chr11	89710298	89717872	chr11:89710298-89717872	3	+	89710298	89717872	789624	6	411,96,231,23,98,494,	0,1111,3893,4859,5591,7080,
#Partially deleted in new
chr11	89710649	89717806	chr11:89710649-89717806	0	+	89710649	89717806	789624	5	60,96,23,98,428,	0,760,4508,5240,6729,
#Deleted in new
chr11	89723481	89727253	chr11:89723481-89727253	7	-	89723481	89723481	16724991	2	681,77,	0,3695,
#Deleted in new
chr11	89731016	89734782	chr11:89731016-89734782	7	+	89731016	89731016	16724991	1	3766,	0,
#Deleted in new
chr11	89752784	89753975	chr11:89752784-89753975	7	-	89752784	89752784	16724991	1	1191,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	89753981	89754953	chr11:89753981-89754953	3	-	89753981	89753981	8553170	2	117,369,	0,603,
#Deleted in new
chr11	89764883	89765138	chr11:89764883-89765138	7	+	89764883	89764883	16724991	1	255,	0,
#Deleted in new
chr11	89766439	89768836	chr11:89766439-89768836	7	-	89766439	89766439	16724991	3	634,98,23,	0,1749,2374,
#Deleted in new
chr11	89776980	89782377	chr11:89776980-89782377	5	+	89776980	89776980	16724991	6	410,93,231,23,114,494,	0,941,1732,2725,3685,4903,
#Deleted in new
chr11	89777154	89782582	chr11:89777154-89782582	7	+	89777154	89777154	16724991	5	232,96,231,98,699,	0,764,1558,3527,4729,
#Partially deleted in new
chr11	89785944	89787838	chr11:89785944-89787838	7	+	89785944	89785944	16724991	2	469,985,	0,909,
#Deleted in new
chr11	89789411	89789733	chr11:89789411-89789733	7	-	89789411	89789411	16724991	1	322,	0,
#Partially deleted in new
chr11	89797654	89808575	chr11:89797654-89808575	3	-	89798129	89804469	789624	8	975,98,23,231,96,415,186,139,	0,2061,3311,4047,6043,6404,9444,10782,
#Partially deleted in new
chr11	89797946	89807220	chr11:89797946-89807220	1	-	89798129	89804469	789624	6	683,98,23,96,415,122,	0,1769,3019,5751,6112,9152,
#Partially deleted in new
chr11	89820081	89826922	chr11:89820081-89826922	7	+	89820081	89820081	16724991	6	411,96,141,23,116,451,	0,849,1720,2558,5154,6390,
#Partially deleted in new
chr11	89841996	89850970	chr11:89841996-89850970	7	+	89841996	89841996	16724991	5	191,415,96,342,676,	0,2767,3467,6869,8298,
#Partially deleted in new
chr11	89854952	89862893	chr11:89854952-89862893	7	+	89854952	89854952	16724991	6	411,96,231,23,98,500,	0,694,2609,3558,4527,7441,
#Partially deleted in new
chr11	89863847	89865550	chr11:89863847-89865550	7	-	89863847	89863847	16724991	2	743,435,	0,1268,
#Deleted in new
chr11	89869281	89876017	chr11:89869281-89876017	3	-	89870620	89876017	789624	6	1833,98,23,231,96,408,	0,2933,3986,4767,5696,6328,
#Partially deleted in new
chr11	89883926	89886213	chr11:89883926-89886213	7	-	89883926	89883926	16724991	2	186,98,	0,2189,
#Deleted in new
chr11	89887365	89889991	chr11:89887365-89889991	7	+	89887365	89887365	16724991	4	30,98,276,186,	0,548,1762,2440,
#Deleted in new
chr11	89895798	89900449	chr11:89895798-89900449	7	-	89895798	89895798	16724991	2	4,3194,	0,1457,
#Deleted in new
chr11	89908539	89909047	chr11:89908539-89909047	7	+	89908539	89908539	16724991	1	508,	0,
#Partially deleted in new
chr11	89911110	89921767	chr11:89911110-89921767	3	-	89911586	89917710	789624	8	976,98,23,231,96,415,190,135,	0,2093,3064,3801,5808,6189,9188,10522,
#Partially deleted in new
chr11	89911406	89920428	chr11:89911406-89920428	1	-	89911586	89917710	789624	6	680,98,23,96,415,130,	0,1797,2768,5512,5893,8892,
#Partially deleted in new
chr11	89911408	89920408	chr11:89911408-89920408	1	-	89911586	89917710	789624	7	678,98,23,231,96,415,110,	0,1795,2766,3503,5510,5891,8890,
#Partially deleted in new
chr11	89924063	89933063	chr11:89924063-89933063	3	+	89926761	89932885	789624	7	110,415,96,231,23,98,678,	0,2694,3394,5266,6211,7107,8322,
#Deleted in new
chr11	89926761	89932937	chr11:89926761-89932937	1	+	89926761	89932885	789624	6	411,96,231,23,98,552,	0,696,2568,3513,4409,5624,
#Deleted in new
chr11	89944034	89949402	chr11:89944034-89949402	7	+	89944034	89944034	16724991	2	3258,657,	0,4711,
#Deleted in new
chr11	89954592	89954908	chr11:89954592-89954908	7	-	89954592	89954592	16724991	1	316,	0,
#Deleted in new
chr11	89955145	89957165	chr11:89955145-89957165	7	-	89955145	89955145	16724991	3	265,35,23,	0,1363,1997,
#Deleted in new
chr11	89960421	89960624	chr11:89960421-89960624	7	+	89960421	89960421	16724991	1	203,	0,
#Deleted in new
chr11	89968501	89975228	chr11:89968501-89975228	3	+	89968503	89973889	789624	6	410,96,231,23,98,1833,	0,948,1742,2731,3695,4894,
#Partially deleted in new
chr11	89978539	89980661	chr11:89978539-89980661	7	+	89978539	89978539	16724991	2	855,822,	0,1300,
#Partially deleted in new
chr11	89981440	89989559	chr11:89981440-89989559	7	-	89981440	89981440	16724991	6	676,98,46,231,72,393,	0,3491,4600,5277,7329,7726,
#Deleted in new
chr11	89993535	89999741	chr11:89993535-89999741	7	-	89993535	89993535	16724991	6	681,98,23,231,96,415,	0,1768,2722,3446,5410,5791,
#Partially deleted in new
chr11	90017610	90024511	chr11:90017610-90024511	7	-	90017610	90017610	16724991	5	439,45,216,96,406,	0,1617,4963,5954,6495,
#Partially deleted in new
chr11	90031105	90042025	chr11:90031105-90042025	3	+	90035211	90041550	789624	8	139,186,415,96,231,23,98,975,	0,1291,4102,4782,6643,7587,8759,9945,
#Deleted in new
chr11	90049944	90050266	chr11:90049944-90050266	7	+	90049944	90049944	16724991	1	322,	0,
#Partially deleted in new
chr11	90051836	90053736	chr11:90051836-90053736	7	-	90051836	90051836	16724991	2	1007,452,	0,1448,
#Deleted in new
chr11	90057604	90062999	chr11:90057604-90062999	7	-	90057604	90057604	16724991	6	491,98,23,231,96,391,	0,1595,2644,3429,4358,5004,
#Deleted in new
chr11	90071135	90073055	chr11:90071135-90073055	7	+	90071135	90071135	16724991	3	28,42,147,	0,616,1773,
#Deleted in new
chr11	90074838	90075096	chr11:90074838-90075096	7	-	90074838	90074838	16724991	1	258,	0,
#Deleted in new
chr11	90085949	90087131	chr11:90085949-90087131	3	+	90085949	90087131	789624	1	1182,	0,
#Deleted in new
chr11	90098420	90098817	chr11:90098420-90098817	7	-	90098420	90098420	16724991	1	397,	0,
#Deleted in new
chr11	90118390	90118461	chr11:90118390-90118461	3	+	90118390	90118390	8553170	1	71,	0,
#Deleted in new
chr11	90125657	90126061	chr11:90125657-90126061	3	+	90125657	90125657	8553170	1	404,	0,
#Partially deleted in new
chr11	90131514	90147400	chr11:90131514-90147400	0	+	90134758	90147400	789624	5	303,110,134,112,71,	0,579,3192,4044,15815,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr11	90134528	90192894	chr11:90134528-90192894	3	+	90134758	90191747	0	19	312,112,187,102,126,187,94,99,86,120,83,64,68,92,91,265,82,93,1337,	0,1030,12801,14477,15953,17769,23616,24710,28420,28781,29006,34400,35540,39295,41443,43324,47091,48387,57029,
#Partially deleted in new
chr11	90134614	90164350	chr11:90134614-90164350	0	+	90134758	90159294	789624	10	226,112,187,102,126,187,99,86,120,816,	0,944,12715,14391,15867,17683,24624,28334,28695,28920,
#Partially deleted in new
chr11	90134663	90158757	chr11:90134663-90158757	0	+	90134663	90134663	8553170	7	177,112,187,102,126,187,613,	0,895,12666,14342,15818,17634,23481,
#Partially deleted in new
chr11	90134694	90164201	chr11:90134694-90164201	0	+	90134694	90134694	8553170	10	142,112,187,102,126,187,1193,86,120,667,	0,864,12635,14311,15787,17603,23450,28254,28615,28840,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr11	90134711	90192611	chr11:90134711-90192611	1	+	90134758	90191747	789624	18	129,112,187,102,126,187,94,86,120,83,64,68,92,91,265,82,93,1054,	0,847,12618,14294,15770,17586,23433,28237,28598,28823,34217,35357,39112,41260,43141,46908,48204,56846,
#Partially deleted in new
chr11	90134728	90164201	chr11:90134728-90164201	1	+	90134758	90163737	789624	8	112,112,187,102,126,187,120,667,	0,830,12601,14277,15753,17569,28581,28806,
#Partially deleted in new
chr11	90134737	90191889	chr11:90134737-90191889	1	+	90134758	90191679	0	7	103,112,187,102,126,187,332,	0,821,12592,14268,15744,17560,56820,
#Partially deleted in new
chr11	90135063	90149107	chr11:90135063-90149107	0	+	90135638	90149107	789624	4	83,112,187,102,	0,495,12266,13942,
#Partially deleted in new
chr11	90162491	90169685	chr11:90162491-90169685	0	+	90162491	90162491	8553170	3	938,83,757,	0,1043,6437,
#Deleted in new
chr11	90193613	90198120	chr11:90193613-90198120	3	+	90193613	90193613	8553170	1	4507,	0,
#Partially deleted in new
chr11	90201159	90223364	chr11:90201159-90223364	3	-	90202404	90222954	0	11	1392,63,120,106,71,59,104,158,57,50,474,	0,1653,2148,4300,5042,9376,10055,12858,14014,16975,21731,
#Partially deleted in new
chr11	90201443	90210765	chr11:90201443-90210765	1	-	90202404	90205564	789624	6	1108,63,120,106,71,230,	0,1369,1864,4016,4758,9092,
#Partially deleted in new
chr11	90201448	90223059	chr11:90201448-90223059	1	-	90202404	90222954	0	10	1103,63,120,106,71,59,104,158,50,169,	0,1364,1859,4011,4753,9087,9766,12569,16686,21442,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	90201448	90223041	chr11:90201448-90223041	0	-	90201448	90201448	8553170	9	1103,63,120,106,71,3640,57,50,151,	0,1364,1859,4011,4753,9087,13725,16686,21442,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	90201948	90209478	chr11:90201948-90209478	1	-	90202404	90205564	789624	4	603,63,120,4019,	0,864,1359,3511,
#Partially deleted in new
chr11	90202406	90223030	chr11:90202406-90223030	0	-	90206747	90222954	789624	12	145,63,120,106,71,63,59,104,158,57,50,140,	0,406,901,3053,3795,4341,8129,8808,11611,12767,15728,20484,
#Partially deleted in new
chr11	90210570	90223049	chr11:90210570-90223049	0	-	90211301	90222954	789624	6	21,121,158,57,50,159,	0,644,3447,4603,7564,12320,
#Partially deleted in new
chr11	90213308	90223077	chr11:90213308-90223077	1	-	90213398	90222954	789624	5	112,158,57,50,187,	0,709,1865,4826,9582,
#Partially deleted in new
chr11	90213978	90223071	chr11:90213978-90223071	0	-	90216547	90222954	789624	5	197,57,90,50,181,	0,1195,2485,4156,8912,
#Partially deleted in new
chr11	90214017	90223072	chr11:90214017-90223072	0	-	90222600	90222954	789624	4	158,57,50,544,	0,1156,4117,8511,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	90217746	90223034	chr11:90217746-90223034	0	-	90217746	90217746	8553170	2	438,144,	0,5144,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	90223152	90226538	chr11:90223152-90226538	3	+	90223152	90223152	8553170	1	3386,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	90251203	90915048	chr11:90251203-90915048	3	+	90251203	90251203	8553170	8	114,64,142,97,70,157,92,179,	0,110355,295550,550562,593676,598180,601412,663666,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	90251231	90915052	chr11:90251231-90915052	1	+	90251231	90251231	789624	7	86,142,104,97,70,92,183,	0,295522,351573,550534,593648,601384,663638,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	90251284	90863359	chr11:90251284-90863359	1	+	90251284	90251284	8553170	7	33,142,104,97,70,92,7,	0,295469,351520,550481,593595,601331,612068,
#Partially deleted in new
chr11	90282559	90284172	chr11:90282559-90284172	7	+	90282559	90282559	16724991	1	1613,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	90491718	90852657	chr11:90491718-90852657	1	+	90491718	90491718	8553170	6	71,142,44,97,70,42,	0,55035,224678,310047,353161,360897,
#Deleted in new
chr11	90555773	90555857	chr11:90555773-90555857	3	-	90555773	90555773	5263520	1	84,	0,
#Partially deleted in new
chr11	90731109	90731723	chr11:90731109-90731723	3	+	90731109	90731109	8553170	1	614,	0,
#Partially deleted in new
chr11	90852064	90853798	chr11:90852064-90853798	0	+	90852064	90852064	8553170	1	1734,	0,
#Partially deleted in new
chr11	90972315	90972521	chr11:90972315-90972521	3	-	90972315	90972315	8553170	1	206,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	91013786	91015299	chr11:91013786-91015299	3	+	91013786	91013786	8553170	1	1513,	0,
#Partially deleted in new
chr11	91093874	91094260	chr11:91093874-91094260	3	-	91093874	91093874	8553170	1	386,	0,
#Partially deleted in new
chr11	91114723	91115951	chr11:91114723-91115951	7	-	91114723	91114723	16724991	1	1228,	0,
#Partially deleted in new
chr11	91115960	91116555	chr11:91115960-91116555	7	+	91115960	91115960	16724991	1	595,	0,
#Partially deleted in new
chr11	91158082	91167294	chr11:91158082-91167294	3	+	91158082	91158082	8553170	3	205,144,155,	0,8666,9057,
#Partially deleted in new
chr11	91184933	91185543	chr11:91184933-91185543	3	-	91184933	91184933	8553170	1	610,	0,
#Partially deleted in new
chr11	91208837	91209590	chr11:91208837-91209590	3	-	91208837	91208837	8553170	1	753,	0,
#Deleted in new
chr11	91382908	91383289	chr11:91382908-91383289	3	+	91382908	91382908	8553170	1	381,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	91794361	91800931	chr11:91794361-91800931	1	+	91794361	91794361	8553170	4	61,153,108,711,	0,947,1639,5859,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	91795306	91803492	chr11:91795306-91803492	0	+	91795306	91795306	8553170	3	106,108,201,	0,694,7985,
#Partially deleted in new
chr11	91803354	91812294	chr11:91803354-91812294	3	+	91803354	91803354	8553170	2	138,306,	0,8634,
#Deleted in new
chr11	91949730	91950034	chr11:91949730-91950034	7	-	91949730	91949730	16724991	1	304,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	91992832	91993255	chr11:91992832-91993255	3	+	91992832	91992832	8553170	1	423,	0,
#Deleted in new
chr11	92161105	92161889	chr11:92161105-92161889	7	+	92161105	92161105	16724991	1	784,	0,
#Deleted in new
chr11	92336031	92336496	chr11:92336031-92336496	7	-	92336031	92336031	16724991	1	465,	0,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr11	92352095	92896452	chr11:92352095-92896452	3	+	92352112	92891113	789624	25	3309,315,62,315,211,140,276,211,4074,197,154,234,390,215,138,144,198,799,135,158,469,154,656,114,5962,	0,172538,345288,409760,412783,421945,437847,440671,445740,453057,454266,457747,479526,482774,484470,485567,488466,491838,505118,507069,514645,528635,530642,534904,538395,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr11	92352540	92896470	chr11:92352540-92896470	1	+	92352562	92891113	789624	27	2864,315,62,315,211,140,276,211,4074,197,154,234,390,215,138,144,198,799,135,158,469,154,656,114,60,36,5980,	0,172093,344843,409315,412338,421500,437402,440226,445295,452612,453821,457302,479081,482329,484025,485122,488021,491393,504673,506624,514200,528190,530197,534459,536648,537315,537950,
#Partially deleted in new
chr11	92355185	92524949	chr11:92355185-92524949	0	+	92355185	92355185	8553170	2	219,316,	0,169448,
#Deleted in new
chr11	92366495	92367250	chr11:92366495-92367250	7	-	92366495	92366495	16724991	1	755,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	92400190	92408176	chr11:92400190-92408176	3	-	92400190	92400190	8553170	5	232,127,172,114,130,	0,388,3030,6406,7856,
#Deleted in new
chr11	92498151	92498935	chr11:92498151-92498935	7	-	92498151	92498151	16724991	1	784,	0,
#Partially deleted in new
chr11	92748731	92766867	chr11:92748731-92766867	3	-	92748731	92748731	8553170	2	338,245,	0,17891,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	92844339	92896305	chr11:92844339-92896305	1	+	92844362	92891113	789624	8	393,135,158,469,154,656,114,5815,	0,12874,14825,22401,36391,38398,42660,46151,
#Partially deleted in new
chr11	92883298	92890862	chr11:92883298-92890862	0	+	92883298	92883298	8553170	3	95,114,372,	0,3701,7192,
#Deleted in new
chr11	92886864	92890626	chr11:92886864-92890626	0	+	92886864	92886864	8553170	4	249,60,36,136,	0,2324,2991,3626,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	92914271	92915604	chr11:92914271-92915604	3	-	92914271	92914271	789624	3	204,99,403,	0,751,930,
#Deleted in new
chr11	92914602	92916591	chr11:92914602-92916591	5	+	92914602	92914602	16724991	5	140,180,288,151,166,	0,309,964,1338,1823,
#Partially deleted in new
chr11	92915883	92931322	chr11:92915883-92931322	7	+	92915883	92915883	16724991	2	81,274,	0,15165,
#Deleted in new
chr11	92937440	92937666	chr11:92937440-92937666	7	+	92937440	92937440	16724991	1	226,	0,
#Partially deleted in new
chr11	92969719	92982782	chr11:92969719-92982782	3	+	92969725	92982312	789624	2	229,1336,	0,11727,
#Partially deleted in new
chr11	92969725	92982312	chr11:92969725-92982312	0	+	92969725	92972477	789624	3	223,131,866,	0,2735,11721,
#Partially deleted in new
chr11	92969783	92985066	chr11:92969783-92985066	0	+	92969783	92984981	789624	2	165,260,	0,15023,
#Deleted in new
chr11	93052394	93052827	chr11:93052394-93052827	7	-	93052394	93052394	16724991	1	433,	0,
#Deleted in new
chr11	93071528	93072031	chr11:93071528-93072031	3	+	93071528	93071528	8553170	1	503,	0,
#Partially deleted in new
chr11	93133854	93134164	chr11:93133854-93134164	3	+	93133854	93133854	8553170	1	310,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	93144170	93197963	chr11:93144170-93197963	3	-	93148536	93197832	789624	11	4674,170,170,99,228,85,96,89,91,124,186,	0,9937,18535,21747,23773,36626,37520,38635,40259,41520,53607,
#Partially deleted in new
chr11	93148147	93155488	chr11:93148147-93155488	0	-	93148147	93148147	8553170	2	697,1381,	0,5960,
#Partially deleted in new
chr11	93148314	93197455	chr11:93148314-93197455	1	-	93148536	93181740	789624	11	530,170,170,99,228,85,96,60,91,124,264,	0,5793,14391,17603,19629,32482,33376,34520,36115,37376,48877,
#Deleted in new
chr11	93152074	93152750	chr11:93152074-93152750	7	+	93152074	93152074	16724991	1	676,	0,
#Partially deleted in new
chr11	93153963	93167530	chr11:93153963-93167530	0	-	93153963	93153963	8553170	3	314,170,1613,	0,8742,11954,
#Partially deleted in new
chr11	93154156	93182894	chr11:93154156-93182894	0	-	93154156	93182846	789624	7	121,170,99,228,85,96,89,	0,8549,11761,13787,26640,27534,28649,
#Partially deleted in new
chr11	93170153	93197964	chr11:93170153-93197964	0	-	93181780	93197832	789624	7	68,85,96,60,91,124,187,	0,10643,11537,12681,14276,15537,27624,
#Deleted in new
chr11	93171133	93171906	chr11:93171133-93171906	3	+	93171133	93171133	8553170	1	773,	0,
#Partially deleted in new
chr11	93185219	93197929	chr11:93185219-93197929	0	-	93185219	93185219	8553170	2	595,152,	0,12558,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	93206989	93207583	chr11:93206989-93207583	3	-	93206989	93206989	8553170	1	594,	0,
#Deleted in new
chr11	93221485	93221630	chr11:93221485-93221630	7	-	93221485	93221485	16724991	1	145,	0,
#Partially deleted in new
chr11	93240132	93241168	chr11:93240132-93241168	3	+	93240132	93240132	8553170	2	104,296,	0,740,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	93286628	93288903	chr11:93286628-93288903	3	-	93286628	93286628	8553170	1	2275,	0,
#Partially deleted in new
chr11	93329970	93437702	chr11:93329970-93437702	0	+	93332259	93437702	789624	14	122,73,172,96,135,114,243,146,106,198,87,197,115,160,	0,2245,25400,26977,34189,40102,41067,55427,59049,64488,66268,78260,85029,107572,
#Partially deleted in new
chr11	93329989	93415200	chr11:93329989-93415200	0	+	93355404	93415200	789624	13	103,73,172,96,135,114,243,146,106,198,87,197,201,	0,2226,25381,26958,34170,40083,41048,55408,59030,64469,66249,78241,85010,
#Partially deleted in new
chr11	93329997	93396367	chr11:93329997-93396367	1	+	93332259	93396337	789624	11	244,73,172,96,135,114,243,146,106,198,129,	0,2218,25373,26950,34162,40075,41040,55400,59022,64461,66241,
#Partially deleted in new
chr11	93329998	93355527	chr11:93329998-93355527	0	+	93329998	93329998	8553170	4	94,73,106,157,	0,2217,22304,25372,
#Partially deleted in new
chr11	93330601	93438487	chr11:93330601-93438487	0	+	93332259	93415005	8553170	14	177,73,172,96,135,114,243,146,106,198,87,177,115,945,	0,1614,24769,26346,33558,39471,40436,54796,58418,63857,65637,77629,84398,106941,
#Partially deleted in new
chr11	93330644	93352511	chr11:93330644-93352511	1	+	93332259	93352435	789624	3	128,73,209,	0,1571,21658,
#Partially deleted in new
chr11	93330716	93438468	chr11:93330716-93438468	3	+	93332259	93437719	789624	14	56,73,172,96,135,114,243,146,106,198,87,197,115,926,	0,1499,24654,26231,33443,39356,40321,54681,58303,63742,65522,77514,84283,106826,
#Partially deleted in new
chr11	93332212	93438487	chr11:93332212-93438487	0	+	93332259	93394462	789624	12	76,172,96,135,114,243,146,106,200,87,227,986,	0,23158,24735,31947,37860,38825,53185,56807,62244,64026,76018,105289,
#Partially deleted in new
chr11	93332215	93389071	chr11:93332215-93389071	0	+	93332259	93389071	789624	8	73,172,96,135,114,243,146,52,	0,23155,24732,31944,37857,38822,53182,56804,
#Partially deleted in new
chr11	93332221	93357475	chr11:93332221-93357475	1	+	93332259	93357067	789624	3	67,172,528,	0,23149,24726,
#Partially deleted in new
chr11	93383467	93438470	chr11:93383467-93438470	1	+	93383595	93437719	789624	8	143,146,106,198,87,197,115,928,	0,1930,5552,10991,12771,24763,31532,54075,
#Partially deleted in new
chr11	93411058	93437702	chr11:93411058-93437702	0	+	93411058	93411058	8553170	3	164,115,160,	0,3941,26484,
#Partially deleted in new
chr11	93478471	93543508	chr11:93478471-93543508	3	-	93479009	93479189	789624	3	798,73,233,	0,20804,64804,
#Partially deleted in new
chr11	93478471	93499351	chr11:93478471-93499351	1	-	93479009	93479189	789624	2	813,76,	0,20804,
#Partially deleted in new
chr11	93478940	93537915	chr11:93478940-93537915	1	-	93479009	93479189	789624	3	329,73,70,	0,20335,58905,
#Deleted in new
chr11	93479009	93479189	chr11:93479009-93479189	1	-	93479009	93479189	789624	1	180,	0,
#Partially deleted in new
chr11	93479033	93523367	chr11:93479033-93523367	0	-	93479033	93479189	789624	3	251,73,31,	0,20242,44303,
#Partially deleted in new
chr11	93479048	93543355	chr11:93479048-93543355	0	-	93479048	93479189	789624	3	221,73,80,	0,20227,64227,
#Deleted in new
chr11	93535467	93535816	chr11:93535467-93535816	7	+	93535467	93535467	16724991	1	349,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	93556912	93557206	chr11:93556912-93557206	3	+	93556912	93556912	8553170	1	294,	0,
#Deleted in new
chr11	93587702	93588559	chr11:93587702-93588559	3	+	93587702	93587702	8553170	1	857,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	93592186	93592669	chr11:93592186-93592669	3	+	93592186	93592186	8553170	1	483,	0,
#Deleted in new
chr11	93609759	93610333	chr11:93609759-93610333	7	-	93609759	93609759	16724991	1	574,	0,
#Partially deleted in new
chr11	93661638	93730358	chr11:93661638-93730358	3	+	93666707	93730269	789624	30	136,134,201,125,94,96,141,184,165,222,93,104,138,98,3505,178,144,153,101,97,249,122,181,662,141,97,168,100,100,128,	0,5043,5968,7169,8038,13932,17773,21920,22325,26005,30044,30288,33858,34681,35043,40821,41137,45106,59673,60315,61402,62615,64012,65337,67042,67795,67975,68231,68410,68592,
#Partially deleted in new
chr11	93691680	93695620	chr11:93691680-93695620	0	+	93691680	93691680	8553170	2	95,124,	0,3816,
#Partially deleted in new
chr11	93691704	93696975	chr11:93691704-93696975	0	+	93691704	93696975	789624	5	71,104,177,98,294,	0,222,3792,4615,4977,
#Partially deleted in new
chr11	93695529	93730356	chr11:93695529-93730356	1	+	93702501	93730269	789624	17	144,98,173,178,153,101,97,249,122,181,662,141,97,168,100,100,126,	0,790,1152,6930,11215,25782,26424,27511,28724,30121,31446,33151,33904,34084,34340,34519,34701,
#Partially deleted in new
chr11	93698907	93723064	chr11:93698907-93723064	0	+	93702501	93723064	789624	5	1279,178,153,101,24,	0,3552,7837,22404,24133,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	93719602	93719715	chr11:93719602-93719715	3	+	93719602	93719602	8553170	1	113,	0,
#Deleted in new
chr11	93721512	93721865	chr11:93721512-93721865	3	+	93721512	93721512	789624	1	353,	0,
#Deleted in new
chr11	93721541	93721621	chr11:93721541-93721621	3	+	93721541	93721541	8553170	1	80,	0,
#Deleted in new
chr11	93721796	93721866	chr11:93721796-93721866	3	+	93721796	93721796	8553170	1	70,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	93722501	93730080	chr11:93722501-93730080	0	+	93723057	93730080	789624	9	788,122,181,662,141,97,171,100,32,	0,1752,3149,4474,6179,6932,7109,7368,7547,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	93723398	93727115	chr11:93723398-93727115	0	+	93725734	93727115	789624	3	977,181,140,	0,2252,3577,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	93726653	93729805	chr11:93726653-93729805	3	-	93726653	93726653	8553170	1	3152,	0,
#Partially deleted in new
chr11	93729947	93741494	chr11:93729947-93741494	0	-	93736160	93739304	789624	12	1269,47,48,35,48,36,164,58,176,391,95,173,	0,1805,2296,3139,3402,4677,6193,6746,7116,8161,9289,11374,
#Partially deleted in new
chr11	93730193	93741493	chr11:93730193-93741493	0	-	93736160	93739304	789624	14	254,36,67,47,48,35,156,36,164,58,176,391,95,172,	0,483,956,1559,2050,2893,3156,4431,5947,6500,6870,7915,9043,11128,
#Deleted in new
chr11	93730199	93732501	chr11:93730199-93732501	0	-	93730199	93730199	8553170	5	248,36,67,47,258,	0,477,950,1553,2044,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	93730271	93736175	chr11:93730271-93736175	0	-	93730271	93730271	8553170	9	176,36,67,47,48,35,70,36,1213,	0,405,878,1481,1972,2815,3078,4353,4691,
#Partially deleted in new
chr11	93730280	93736741	chr11:93730280-93736741	0	-	93733361	93736741	789624	10	167,36,67,47,48,35,48,36,15,48,	0,396,869,1472,1963,2806,3069,4344,6009,6413,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	93730281	93735848	chr11:93730281-93735848	0	-	93730281	93730281	8553170	4	166,540,47,3605,	0,395,1471,1962,
#Deleted in new
chr11	93730282	93734661	chr11:93730282-93734661	0	-	93730282	93730282	8553170	7	165,36,67,47,48,35,1312,	0,394,867,1470,1961,2804,3067,
#Deleted in new
chr11	93730353	93735238	chr11:93730353-93735238	0	-	93730353	93730353	8553170	8	94,36,67,47,48,35,70,614,	0,323,796,1399,1890,2733,2996,4271,
#Deleted in new
chr11	93730512	93730646	chr11:93730512-93730646	3	-	93730512	93730512	789624	1	134,	0,
#Deleted in new
chr11	93730666	93732268	chr11:93730666-93732268	0	-	93730666	93730666	8553170	2	550,516,	0,1086,
#Partially deleted in new
chr11	93730681	93736289	chr11:93730681-93736289	0	-	93736160	93736289	789624	8	31,67,47,70,35,48,36,149,	0,468,1071,1562,2405,2668,3943,5459,
#Deleted in new
chr11	93730978	93731099	chr11:93730978-93731099	3	-	93730978	93730978	789624	1	121,	0,
#Partially deleted in new
chr11	93731145	93741479	chr11:93731145-93741479	0	-	93734647	93739304	789624	10	71,47,70,35,48,36,176,391,95,158,	0,607,1098,1941,2204,3479,5918,6963,8091,10176,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	93731160	93736157	chr11:93731160-93736157	0	-	93731160	93731160	8553170	6	56,47,48,35,48,1195,	0,592,1083,1926,2189,3802,
#Deleted in new
chr11	93731501	93731574	chr11:93731501-93731574	3	-	93731501	93731501	789624	1	73,	0,
#Deleted in new
chr11	93732003	93732133	chr11:93732003-93732133	3	-	93732003	93732003	789624	1	130,	0,
#Deleted in new
chr11	93732360	93732499	chr11:93732360-93732499	3	-	93732360	93732360	789624	1	139,	0,
#Partially deleted in new
chr11	93732799	93736239	chr11:93732799-93736239	0	-	93736160	93736239	789624	4	322,48,36,99,	0,550,1825,3341,
#Partially deleted in new
chr11	93732976	93736806	chr11:93732976-93736806	0	-	93732976	93732976	8553170	3	421,36,666,	0,1648,3164,
#Deleted in new
chr11	93733227	93733300	chr11:93733227-93733300	3	-	93733227	93733227	789624	1	73,	0,
#Partially deleted in new
chr11	93733304	93738292	chr11:93733304-93738292	0	-	93733304	93733304	8553170	5	93,36,164,546,184,	0,1320,2836,3389,4804,
#Deleted in new
chr11	93733465	93733597	chr11:93733465-93733597	3	-	93733465	93733465	789624	1	132,	0,
#Deleted in new
chr11	93733673	93733764	chr11:93733673-93733764	3	-	93733673	93733673	5263520	1	91,	0,
#Deleted in new
chr11	93735110	93735236	chr11:93735110-93735236	3	-	93735110	93735110	789624	1	126,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	93735566	93741945	chr11:93735566-93741945	3	-	93736160	93739304	789624	6	738,58,176,391,95,624,	0,1127,1497,2542,3670,5755,
#Deleted in new
chr11	93735914	93736967	chr11:93735914-93736967	0	-	93735914	93735914	8553170	2	390,274,	0,779,
#Partially deleted in new
chr11	93737088	93741480	chr11:93737088-93741480	0	-	93738397	93739304	789624	4	151,332,95,159,	0,1020,2148,4233,
#Partially deleted in new
chr11	93737155	93741476	chr11:93737155-93741476	0	-	93737155	93737155	8553170	3	84,95,155,	0,2081,4166,
#Partially deleted in new
chr11	93738108	93741495	chr11:93738108-93741495	0	-	93738341	93741495	789624	2	391,174,	0,3213,
#Partially deleted in new
chr11	93738966	93741494	chr11:93738966-93741494	0	-	93738966	93738966	8553170	2	365,173,	0,2355,
#Partially deleted in new
chr11	93739280	93784391	chr11:93739280-93784391	0	-	93739280	93739304	789624	3	51,196,88,	0,3422,45023,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	93741590	93764749	chr11:93741590-93764749	1	+	93747393	93761688	0	8	138,152,99,74,102,177,117,3235,	0,5706,8755,12091,12345,13619,18151,19924,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	93741593	93763102	chr11:93741593-93763102	1	+	93750347	93761688	0	8	135,99,74,102,177,150,117,1588,	0,8752,12088,12342,13616,15722,18148,19921,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	93741593	93763102	chr11:93741593-93763102	1	+	93747393	93761688	789624	8	135,152,99,74,102,150,117,1588,	0,5703,8752,12088,12342,15722,18148,19921,
#Partially deleted in new
chr11	93741595	93742753	chr11:93741595-93742753	0	+	93741595	93741595	8553170	2	133,35,	0,1123,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	93741641	93763083	chr11:93741641-93763083	3	+	93747393	93761688	0	9	87,147,99,74,102,177,150,117,1569,	0,5660,8704,12040,12294,13568,15674,18100,19873,
#Partially deleted in new
chr11	93741656	93754008	chr11:93741656-93754008	0	+	93747393	93754008	789624	6	72,104,152,99,74,73,	0,306,5640,8689,12025,12279,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	93741658	93762303	chr11:93741658-93762303	1	+	93747393	93761688	0	10	70,132,152,99,74,102,177,150,117,789,	0,304,5638,8687,12023,12277,13551,15657,18083,19856,
#Partially deleted in new
chr11	93741663	93812378	chr11:93741663-93812378	3	+	93747393	93812064	789624	19	65,152,74,102,177,150,117,136,167,220,137,85,153,131,185,138,118,160,526,	0,5633,12018,12272,13546,15652,18078,42964,46337,48910,52064,52287,53244,54746,55871,60171,65854,68053,70189,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	93741668	93762316	chr11:93741668-93762316	1	+	93747393	93761688	0	9	60,152,99,74,102,177,150,117,802,	0,5628,8677,12013,12267,13541,15647,18073,19846,
#Partially deleted in new
chr11	93741669	93759859	chr11:93741669-93759859	0	+	93750347	93759859	789624	7	59,99,74,102,177,150,118,	0,8676,12012,12266,13540,15646,18072,
#Partially deleted in new
chr11	93741682	93753757	chr11:93741682-93753757	0	+	93747393	93753757	789624	5	46,179,152,99,76,	0,280,5614,8663,11999,
#Partially deleted in new
chr11	93741685	93759816	chr11:93741685-93759816	0	+	93747393	93759816	789624	7	43,152,99,74,102,150,75,	0,5611,8660,11996,12250,15630,18056,
#Partially deleted in new
chr11	93741687	93753994	chr11:93741687-93753994	0	+	93747393	93753994	789624	6	41,132,147,99,74,59,	0,275,5614,8658,11994,12248,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	93745828	93755393	chr11:93745828-93755393	0	+	93747393	93755393	789624	6	652,147,99,74,102,184,	0,1473,4517,7853,8107,9381,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	93746484	93755326	chr11:93746484-93755326	0	+	93747393	93755326	789624	5	964,99,74,102,117,	0,3861,7197,7451,8725,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	93754872	93761636	chr11:93754872-93761636	0	+	93755212	93761636	789624	4	514,150,117,122,	0,2443,4869,6642,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	93784226	93814963	chr11:93784226-93814963	3	+	93784513	93812064	789624	12	537,167,220,137,85,153,131,185,138,118,160,3111,	0,3774,6347,9501,9724,10681,12183,13308,17608,23291,25490,27626,
#Partially deleted in new
chr11	93784226	93812362	chr11:93784226-93812362	0	+	93784226	93784226	8553170	11	537,167,220,308,153,131,185,138,118,160,510,	0,3774,6347,9501,10681,12183,13308,17608,23291,25490,27626,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	93784241	93813268	chr11:93784241-93813268	0	+	93784513	93794254	789624	13	522,167,220,137,85,190,153,131,185,138,118,160,1416,	0,3759,6332,9486,9709,10008,10666,12168,13293,17593,23276,25475,27611,
#Partially deleted in new
chr11	93784262	93812310	chr11:93784262-93812310	0	+	93784513	93801852	789624	10	501,167,220,137,85,153,131,138,118,458,	0,3738,6311,9465,9688,10645,12147,17572,23255,27590,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	93784281	93789796	chr11:93784281-93789796	0	+	93784281	93784281	8553170	2	482,1796,	0,3719,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	93784281	93812347	chr11:93784281-93812347	0	+	93784513	93807537	789624	11	482,167,220,137,85,153,131,185,138,2376,495,	0,3719,6292,9446,9669,10626,12128,13253,17553,23219,27571,
#Partially deleted in new
chr11	93784292	93812405	chr11:93784292-93812405	0	+	93784292	93784292	8553170	11	471,167,220,308,153,131,185,138,135,160,553,	0,3708,6281,9435,10615,12117,13242,17542,23208,25424,27560,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	93784292	93813307	chr11:93784292-93813307	0	+	93784513	93801852	789624	11	471,167,220,137,85,153,131,138,118,160,1455,	0,3708,6281,9435,9658,10615,12117,17542,23225,25424,27560,
#Partially deleted in new
chr11	93784295	93812378	chr11:93784295-93812378	0	+	93784513	93809780	789624	11	468,167,220,137,85,153,131,185,138,160,526,	0,3705,6278,9432,9655,10612,12114,13239,17539,25421,27557,
#Partially deleted in new
chr11	93784306	93812378	chr11:93784306-93812378	1	+	93784513	93812227	789624	11	457,167,220,137,85,153,131,185,138,118,526,	0,3694,6267,9421,9644,10601,12103,13228,17528,23211,27546,
#Partially deleted in new
chr11	93784351	93801942	chr11:93784351-93801942	0	+	93784513	93797542	789624	3	412,185,108,	0,13183,17483,
#Partially deleted in new
chr11	93784361	93790767	chr11:93784361-93790767	0	+	93784513	93790767	789624	4	402,167,84,194,	0,3639,5898,6212,
#Partially deleted in new
chr11	93784363	93796443	chr11:93784363-93796443	0	+	93784513	93796443	789624	5	400,137,85,153,34,	0,9364,9587,10544,12046,
#Partially deleted in new
chr11	93784400	93809876	chr11:93784400-93809876	0	+	93784513	93809876	789624	10	363,167,220,137,85,131,185,138,118,160,	0,3600,6173,9327,9550,12009,13134,17434,23117,25316,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	93784425	93812378	chr11:93784425-93812378	0	+	93784425	93784425	8553170	11	338,167,220,308,190,1633,185,138,118,160,526,	0,3575,6148,9302,9824,10482,13109,17409,23092,25291,27427,
#Partially deleted in new
chr11	93784497	93812277	chr11:93784497-93812277	1	+	93784513	93812064	789624	11	266,167,220,137,85,153,131,185,118,160,425,	0,3503,6076,9230,9453,10410,11912,13037,23020,25219,27355,
#Partially deleted in new
chr11	93784573	93794931	chr11:93784573-93794931	0	+	93784573	93790602	789624	5	190,220,137,85,24,	0,6000,9154,9377,10334,
#Partially deleted in new
chr11	93784577	93811888	chr11:93784577-93811888	0	+	93784577	93801852	789624	6	186,167,138,118,160,36,	0,3423,17257,22940,25139,27275,
#Partially deleted in new
chr11	93784748	93812310	chr11:93784748-93812310	0	+	93784748	93784894	789624	12	185,167,220,137,85,153,131,185,138,118,160,458,	0,3252,5825,8979,9202,10159,11661,12786,17086,22769,24968,27104,
#Partially deleted in new
chr11	93788056	93812310	chr11:93788056-93812310	0	+	93788056	93796941	789624	9	111,220,137,85,783,138,118,160,458,	0,2517,5671,5894,8880,13778,19461,21660,23796,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	93793173	93812380	chr11:93793173-93812380	0	+	93793173	93793173	8553170	8	862,153,131,185,138,118,160,528,	0,1734,3236,4361,8661,14344,16543,18679,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	93794747	93797663	chr11:93794747-93797663	0	+	93794747	93794747	8553170	3	313,131,129,	0,1662,2787,
#Partially deleted in new
chr11	93796359	93801965	chr11:93796359-93801965	0	+	93796359	93796359	8553170	3	181,185,131,	0,1175,5475,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	93800660	93813137	chr11:93800660-93813137	0	+	93800660	93800660	8553170	4	1312,118,160,1285,	0,6857,9056,11192,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	93801548	93812378	chr11:93801548-93812378	0	+	93801548	93801548	8553170	3	424,118,2662,	0,5969,8168,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	93806100	93812334	chr11:93806100-93812334	0	+	93806100	93806100	8553170	3	1535,160,482,	0,3616,5752,
#Partially deleted in new
chr11	93818231	93850531	chr11:93818231-93850531	3	-	93820568	93850502	789624	4	2381,141,327,120,	0,2511,2765,32180,
#Deleted in new
chr11	93818806	93820759	chr11:93818806-93820759	0	-	93820568	93820759	789624	3	46,326,17,	0,1480,1936,
#Deleted in new
chr11	93820563	93822073	chr11:93820563-93822073	0	-	93820563	93820563	8553170	2	320,1077,	0,433,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	93991345	93991429	chr11:93991345-93991429	7	-	93991345	93991345	16724991	1	84,	0,
#Deleted in new
chr11	93998642	93999218	chr11:93998642-93999218	7	-	93998642	93998642	16724991	1	576,	0,
#Partially deleted in new
chr11	94021360	94113751	chr11:94021360-94113751	3	+	94021368	94111894	789624	20	178,245,213,180,255,169,140,132,212,151,213,214,140,141,107,223,140,163,69,2060,	0,24312,42147,42970,46135,49013,51664,51947,53813,61057,64616,67394,72140,79834,81553,83167,84630,89542,90176,90331,
#Deleted in new
chr11	94055022	94055972	chr11:94055022-94055972	7	-	94055022	94055022	16724991	1	950,	0,
#Partially deleted in new
chr11	94128927	94181972	chr11:94128927-94181972	3	+	94129312	94180869	789624	5	566,140,224,656,1183,	0,24563,49441,50674,51862,
#Partially deleted in new
chr11	94128928	94181966	chr11:94128928-94181966	1	+	94129312	94180869	789624	5	565,140,224,656,1165,	0,24562,49440,50673,51873,
#Deleted in new
chr11	94188448	94188997	chr11:94188448-94188997	7	-	94188448	94188448	16724991	1	549,	0,
#Deleted in new
chr11	94305591	94307692	chr11:94305591-94307692	3	+	94305636	94307692	0	4	183,210,136,269,	0,921,1573,1832,
#Deleted in new
chr11	94305592	94307721	chr11:94305592-94307721	1	+	94305636	94307692	0	4	182,189,136,298,	0,920,1572,1831,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	94377310	94401419	chr11:94377310-94401419	3	-	94380148	94401247	789624	4	3463,134,126,559,	0,16174,19088,23550,
#Partially deleted in new
chr11	94379530	94401392	chr11:94379530-94401392	1	-	94380148	94401247	789624	3	1243,134,532,	0,13954,21330,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr11	94415577	94493908	chr11:94415577-94493908	3	-	94420124	94492801	0	20	4604,76,68,59,84,220,63,174,101,127,81,172,186,115,142,88,161,133,125,118,	0,14333,20254,21599,30232,31641,40698,43830,45358,48535,52235,54893,55996,60711,63157,64096,70346,75255,77204,78213,
#Partially deleted in new
chr11	94419865	94493843	chr11:94419865-94493843	1	-	94420124	94492670	0	20	316,76,68,59,84,220,63,174,101,127,81,172,186,115,142,88,161,133,265,53,	0,10045,15966,17311,25944,27353,36410,39542,41070,44247,47947,50605,51708,56423,58869,59808,66058,70967,72776,73925,
#Partially deleted in new
chr11	94419875	94493874	chr11:94419875-94493874	1	-	94420124	94492801	0	19	306,76,68,59,220,63,174,101,127,81,172,186,115,142,88,161,133,125,191,	0,10035,15956,17301,27343,36400,39532,41060,44237,47937,50595,51698,56413,58859,59798,66048,70957,72906,73808,
#Partially deleted in new
chr11	94419877	94493848	chr11:94419877-94493848	1	-	94420124	94492801	789624	20	304,76,68,59,81,220,63,174,101,127,81,172,186,115,142,88,161,133,125,128,	0,10033,15954,17299,25932,27341,36398,39530,41058,44235,47935,50593,51696,56411,58857,59796,66046,70955,72904,73843,
#Partially deleted in new
chr11	94445738	94447300	chr11:94445738-94447300	0	-	94445738	94445738	8553170	2	152,82,	0,1480,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	94466494	94466580	chr11:94466494-94466580	3	-	94466494	94466494	5263520	1	86,	0,
#Deleted in new
chr11	94472907	94473570	chr11:94472907-94473570	3	-	94472907	94472907	8553170	2	554,27,	0,636,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	94475215	94493834	chr11:94475215-94493834	1	-	94475612	94492801	789624	8	404,115,142,88,161,133,125,44,	0,1073,3519,4458,10708,15617,17566,18575,
#Partially deleted in new
chr11	94478760	94493849	chr11:94478760-94493849	0	-	94478760	94478760	8553170	5	116,161,133,125,59,	0,7163,12072,14021,15030,
#Partially deleted in new
chr11	94479694	94493885	chr11:94479694-94493885	0	-	94479694	94492801	789624	5	67,161,133,116,95,	0,6229,11138,13087,14096,
#Partially deleted in new
chr11	94479742	94493812	chr11:94479742-94493812	0	-	94479742	94492801	789624	5	19,161,133,116,129,	0,6181,11090,13039,13941,
#Deleted in new
chr11	94493628	94499583	chr11:94493628-94499583	3	+	94496693	94498532	789624	3	407,348,1513,	0,2975,4442,
#Deleted in new
chr11	94493978	94498112	chr11:94493978-94498112	1	+	94496693	94497071	789624	3	57,474,42,	0,2625,4092,
#Deleted in new
chr11	94493983	94498263	chr11:94493983-94498263	0	+	94496693	94497071	789624	3	52,515,193,	0,2620,4087,
#Deleted in new
chr11	94494002	94498327	chr11:94494002-94498327	0	+	94496693	94498327	789624	3	33,225,257,	0,2601,4068,
#Deleted in new
chr11	94494003	94498214	chr11:94494003-94498214	0	+	94496693	94497904	789624	4	32,348,63,144,	0,2600,3898,4067,
#Deleted in new
chr11	94494003	94498147	chr11:94494003-94498147	0	+	94496693	94498147	789624	3	32,453,77,	0,2600,4067,
#Deleted in new
chr11	94494007	94499577	chr11:94494007-94499577	1	+	94496693	94497071	789624	2	28,2974,	0,2596,
#Deleted in new
chr11	94494028	94497028	chr11:94494028-94497028	0	+	94496693	94497028	789624	2	142,425,	0,2575,
#Deleted in new
chr11	94496599	94499562	chr11:94496599-94499562	1	+	94496693	94498532	789624	2	352,1492,	0,1471,
#Deleted in new
chr11	94496754	94498343	chr11:94496754-94498343	0	+	94496754	94496754	8553170	2	507,273,	0,1316,
#Deleted in new
chr11	94497322	94499577	chr11:94497322-94499577	0	+	94497322	94497322	8553170	2	642,1507,	0,748,
#Partially deleted in new
chr11	94512431	94532123	chr11:94512431-94532123	3	+	94512528	94531900	789624	4	242,105,126,228,	0,5151,15652,19464,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	94543839	94549898	chr11:94543839-94549898	3	+	94544133	94545726	789624	1	6059,	0,
#Partially deleted in new
chr11	94543839	94616564	chr11:94543839-94616564	0	+	94575039	94607442	789624	14	150,79,132,215,122,81,198,112,124,118,112,185,201,72,	0,24890,31159,33438,39608,41605,43210,45281,49678,51469,53964,57955,63599,72653,
#Partially deleted in new
chr11	94545285	94621421	chr11:94545285-94621421	0	+	94545812	94607442	789624	19	533,79,132,215,122,81,198,112,124,118,112,185,201,502,71,154,126,148,546,	0,23444,29713,31992,38162,40159,41764,43835,48232,50023,52518,56509,62153,62899,71207,72668,74474,74711,75590,
#Partially deleted in new
chr11	94545329	94740269	chr11:94545329-94740269	3	-	94545329	94545329	789624	5	517,147,151,87,52,	0,130306,134056,150491,194888,
#Partially deleted in new
chr11	94546190	94740355	chr11:94546190-94740355	0	-	94546190	94546190	789624	4	135,147,151,138,	0,129445,133195,194027,
#Deleted in new
chr11	94559017	94559374	chr11:94559017-94559374	3	+	94559017	94559017	8553170	1	357,	0,
#Partially deleted in new
chr11	94567307	94621421	chr11:94567307-94621421	3	+	94567518	94620992	789624	20	298,79,132,215,122,81,198,112,124,118,112,185,73,201,104,71,154,126,148,546,	0,1422,7691,9970,16140,18137,19742,21813,26210,28001,30496,34487,36676,40131,41275,49185,50646,52452,52689,53568,
#Partially deleted in new
chr11	94567690	94583496	chr11:94567690-94583496	0	+	94575039	94583496	789624	5	112,79,132,215,49,	0,1039,7308,9587,15757,
#Partially deleted in new
chr11	94617788	94621113	chr11:94617788-94621113	1	+	94617886	94620992	789624	4	319,126,148,238,	0,1971,2208,3087,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	94638037	94640833	chr11:94638037-94640833	3	+	94638037	94638037	8553170	6	32,74,174,72,109,251,	0,656,1524,1788,2176,2545,
#Duplicated in new
chr11	94641929	94648574	chr11:94641929-94648574	0	+	94641929	94641929	8553170	3	15,244,315,	0,5405,6330,
#Partially deleted in new
chr11	94706430	94799539	chr11:94706430-94799539	0	+	94728970	94799539	789624	5	167,135,51,150,150,	0,22490,34507,88580,92959,
#Partially deleted in new
chr11	94768341	94876748	chr11:94768341-94876748	1	+	94768511	94870795	789624	12	219,922,292,145,90,146,150,191,126,227,276,6060,	0,31048,53188,61708,63110,81772,85591,91183,96393,97600,100856,102347,
#Partially deleted in new
chr11	94768370	94876753	chr11:94768370-94876753	3	+	94768511	94870795	789624	13	190,150,922,292,145,90,146,150,191,126,227,276,6065,	0,26640,31019,53159,61679,63081,81743,85562,91154,96364,97571,100827,102318,
#Partially deleted in new
chr11	94820299	94830149	chr11:94820299-94830149	0	+	94820299	94820299	8553170	3	86,292,100,	0,1230,9750,
#Deleted in new
chr11	94864827	94866765	chr11:94864827-94866765	0	+	94864827	94864827	8553170	2	33,824,	0,1114,
#Deleted in new
chr11	94913046	94913766	chr11:94913046-94913766	7	+	94913046	94913046	16724991	1	720,	0,
#Partially deleted in new
chr11	94962621	94973612	chr11:94962621-94973612	3	-	94963384	94972185	0	7	893,119,108,89,113,139,115,	0,3673,7367,8355,8753,9433,10876,
#Partially deleted in new
chr11	94963341	94970255	chr11:94963341-94970255	0	-	94963341	94963341	8553170	3	173,119,267,	0,2953,6647,
#Partially deleted in new
chr11	94963367	94973586	chr11:94963367-94973586	0	-	94963367	94963367	8553170	6	147,119,108,511,139,89,	0,2927,6621,7609,8687,10130,
#Deleted in new
chr11	94970487	94973572	chr11:94970487-94973572	0	-	94970487	94970487	8553170	4	578,113,139,75,	0,887,1567,3010,
#Deleted in new
chr11	94970788	94973533	chr11:94970788-94973533	0	-	94970788	94970788	8553170	4	277,113,139,261,	0,586,1266,2484,
#Deleted in new
chr11	94970963	94973546	chr11:94970963-94973546	0	-	94970963	94970963	8553170	3	524,139,258,	0,1091,2325,
#Partially deleted in new
chr11	94973680	94999518	chr11:94973680-94999518	3	+	94997372	94998944	0	3	388,95,2495,	0,1973,23343,
#Partially deleted in new
chr11	94973822	94999514	chr11:94973822-94999514	1	+	94997372	94998944	0	2	246,2491,	0,23201,
#Deleted in new
chr11	94997172	94999363	chr11:94997172-94999363	1	+	94997372	94998944	0	1	2191,	0,
#Deleted in new
chr11	95011857	95012532	chr11:95011857-95012532	7	+	95011857	95011857	16724991	1	675,	0,
#Deleted in new
chr11	95025257	95027596	chr11:95025257-95027596	3	+	95025557	95027078	0	1	2339,	0,
#Deleted in new
chr11	95030548	95031245	chr11:95030548-95031245	7	+	95030548	95030548	16724991	1	697,	0,
#Deleted in new
chr11	95037481	95038456	chr11:95037481-95038456	5	+	95037481	95037481	16724991	1	975,	0,
#Partially deleted in new
chr11	95038371	95039811	chr11:95038371-95039811	7	+	95038371	95038371	16724991	2	190,467,	0,973,
#Deleted in new
chr11	95040410	95041571	chr11:95040410-95041571	7	+	95040410	95040410	16724991	1	1161,	0,
#Deleted in new
chr11	95049421	95051338	chr11:95049421-95051338	3	+	95049421	95051338	789624	1	1917,	0,
#Deleted in new
chr11	95057281	95057984	chr11:95057281-95057984	7	+	95057281	95057281	16724991	1	703,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	95067196	95071224	chr11:95067196-95071224	3	+	95067226	95068075	0	1	4028,	0,
#Deleted in new
chr11	95068057	95069088	chr11:95068057-95069088	0	+	95068057	95068075	8553170	2	126,434,	0,597,
#Partially deleted in new
chr11	95089809	95132645	chr11:95089809-95132645	3	+	95089927	95129579	789624	2	418,4269,	0,38567,
#Deleted in new
chr11	95143636	95145125	chr11:95143636-95145125	7	+	95143636	95143636	16724991	1	1489,	0,
#Deleted in new
chr11	95145436	95146004	chr11:95145436-95146004	7	+	95145436	95145436	16724991	1	568,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	95150538	95159148	chr11:95150538-95159148	3	+	95150538	95150538	789624	3	1210,176,540,	0,7089,8070,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	95151052	95204880	chr11:95151052-95204880	0	+	95151052	95151052	8553170	3	450,176,75,	0,6575,53753,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	95151338	95158057	chr11:95151338-95158057	0	+	95151338	95151338	8553170	2	164,430,	0,6289,
#Partially deleted in new
chr11	95151745	95233690	chr11:95151745-95233690	0	+	95151745	95151745	8553170	4	279,176,85,237,	0,5882,80844,81708,
#Partially deleted in new
chr11	95165512	95231197	chr11:95165512-95231197	3	-	95173254	95230860	789624	10	7829,145,191,119,175,237,183,198,66,415,	0,9985,12206,13197,18907,19743,24266,25891,27944,65270,
#Partially deleted in new
chr11	95173147	95232541	chr11:95173147-95232541	1	-	95173254	95191511	789624	9	194,145,191,119,175,237,198,66,385,	0,2350,4571,5562,11272,12108,18256,20309,59009,
#Partially deleted in new
chr11	95184134	95231046	chr11:95184134-95231046	1	-	95184390	95230860	789624	6	460,237,183,198,66,264,	0,1121,5644,7269,9322,46648,
#Partially deleted in new
chr11	95189818	95232518	chr11:95189818-95232518	0	-	95189818	95191511	789624	6	143,198,66,193,119,106,	0,1585,3638,11092,11418,42594,
#Partially deleted in new
chr11	95191464	95232527	chr11:95191464-95232527	0	-	95191464	95224460	789624	4	137,66,33,371,	0,1992,32987,40692,
#Partially deleted in new
chr11	95191564	95232475	chr11:95191564-95232475	0	-	95191564	95191564	8553170	4	37,66,119,319,	0,1892,9672,40592,
#Deleted in new
chr11	95203726	95204033	chr11:95203726-95204033	7	+	95203726	95203726	16724991	1	307,	0,
#Deleted in new
chr11	95230185	95233929	chr11:95230185-95233929	1	+	95230185	95230185	789624	6	310,449,125,85,40,476,	0,939,1866,2404,2694,3268,
#Deleted in new
chr11	95230395	95233743	chr11:95230395-95233743	1	+	95230395	95230395	8553170	5	100,1052,85,40,290,	0,729,2194,2484,3058,
#Deleted in new
chr11	95231732	95233346	chr11:95231732-95233346	0	+	95231732	95231732	8553170	2	444,757,	0,857,
#Deleted in new
chr11	95232570	95234104	chr11:95232570-95234104	0	+	95232570	95232570	8553170	2	104,651,	0,883,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	95482405	95497553	chr11:95482405-95497553	3	+	95482405	95482405	8553170	3	255,255,60,	0,1537,15088,
#Deleted in new
chr11	95698085	95700623	chr11:95698085-95700623	3	+	95698085	95698085	8553170	3	125,191,190,	0,946,2348,
#Deleted in new
chr11	95756958	95757442	chr11:95756958-95757442	7	-	95756958	95756958	16724991	1	484,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	95768941	95789791	chr11:95768941-95789791	3	-	95771560	95789478	789624	10	2709,102,136,81,48,200,156,55,65,400,	0,6980,9880,10665,10937,14123,17177,18682,19557,20450,
#Partially deleted in new
chr11	95768952	95789615	chr11:95768952-95789615	0	-	95779125	95789478	789624	11	2698,102,136,58,81,48,200,156,55,65,224,	0,6969,9869,10125,10654,10926,14112,17166,18671,19546,20439,
#Partially deleted in new
chr11	95768954	95789790	chr11:95768954-95789790	0	-	95779125	95789478	789624	12	33,46,102,136,58,81,48,200,156,55,65,399,	0,2650,6967,9867,10123,10652,10924,14110,17164,18669,19544,20437,
#Partially deleted in new
chr11	95770114	95789561	chr11:95770114-95789561	1	-	95771560	95789478	789624	10	1536,102,133,81,48,200,156,55,65,170,	0,5807,8707,9492,9764,12950,16004,17509,18384,19277,
#Partially deleted in new
chr11	95771525	95779219	chr11:95771525-95779219	0	-	95771525	95771525	8553170	3	125,102,398,	0,4396,7296,
#Deleted in new
chr11	95775853	95779204	chr11:95775853-95779204	0	-	95775853	95775853	8553170	2	170,383,	0,2968,
#Partially deleted in new
chr11	95778835	95789782	chr11:95778835-95789782	0	-	95778835	95778835	8553170	8	119,58,81,48,200,156,55,1284,	0,242,771,1043,4229,7283,8788,9663,
#Deleted in new
chr11	95779488	95783268	chr11:95779488-95783268	0	-	95779488	95779488	8553170	3	199,48,204,	0,390,3576,
#Partially deleted in new
chr11	95783064	95790409	chr11:95783064-95790409	0	-	95783064	95786192	789624	5	200,156,55,65,254,	0,3054,4559,5434,7091,
#Partially deleted in new
chr11	95783064	95789816	chr11:95783064-95789816	0	-	95783064	95786192	789624	5	200,156,55,65,134,	0,3054,4559,5434,6618,
#Partially deleted in new
chr11	95783197	95786805	chr11:95783197-95786805	0	-	95783197	95786192	789624	2	67,687,	0,2921,
#Partially deleted in new
chr11	95786182	95789104	chr11:95786182-95789104	0	-	95786182	95786182	8553170	4	92,55,65,236,	0,1441,2316,2686,
#Deleted in new
chr11	95787624	95789768	chr11:95787624-95789768	0	-	95788884	95789478	789624	4	54,65,89,377,	0,874,1234,1767,
#Partially deleted in new
chr11	95789964	95831267	chr11:95789964-95831267	1	+	95799267	95831256	789624	11	178,157,180,122,117,78,108,78,242,145,242,	0,9267,22967,23503,27822,28862,31906,32534,37821,39222,41061,
#Partially deleted in new
chr11	95790460	95832691	chr11:95790460-95832691	1	+	95790698	95831256	0	10	283,157,180,122,117,78,108,242,145,1666,	0,8771,22471,23007,27326,28366,31410,37325,38726,40565,
#Partially deleted in new
chr11	95790460	95832693	chr11:95790460-95832693	3	+	95790698	95831256	0	11	283,157,180,122,117,78,108,78,242,145,1668,	0,8771,22471,23007,27326,28366,31410,32038,37325,38726,40565,
#Partially deleted in new
chr11	95790497	95812979	chr11:95790497-95812979	0	+	95790698	95794334	789624	4	246,139,157,48,	0,3723,8734,22434,
#Partially deleted in new
chr11	95790512	95817903	chr11:95790512-95817903	0	+	95795541	95817903	789624	6	231,44,157,180,122,117,	0,5003,8719,22419,22955,27274,
#Partially deleted in new
chr11	95790515	95831281	chr11:95790515-95831281	0	+	95790698	95812950	789624	11	228,157,208,122,117,78,108,78,242,145,256,	0,8716,22388,22952,27271,28311,31355,31983,37270,38671,40510,
#Partially deleted in new
chr11	95790521	95818903	chr11:95790521-95818903	0	+	95799267	95818903	789624	6	222,152,180,122,117,77,	0,8715,22410,22946,27265,28305,
#Partially deleted in new
chr11	95790530	95813520	chr11:95790530-95813520	0	+	95790698	95813012	789624	3	213,180,53,	0,22401,22937,
#Partially deleted in new
chr11	95790532	95831543	chr11:95790532-95831543	0	+	95790698	95812965	789624	11	211,157,160,122,117,78,108,78,242,145,518,	0,8699,22419,22935,27254,28294,31338,31966,37253,38654,40493,
#Partially deleted in new
chr11	95790658	95823215	chr11:95790658-95823215	1	+	95790698	95821984	0	7	85,157,180,122,117,78,1345,	0,8573,22273,22809,27128,28168,31212,
#Partially deleted in new
chr11	95795541	95832691	chr11:95795541-95832691	1	+	95795541	95831256	0	11	18,157,180,122,117,78,108,78,242,145,1666,	0,3690,17390,17926,22245,23285,26329,26957,32244,33645,35484,
#Partially deleted in new
chr11	95812929	95815260	chr11:95812929-95815260	0	+	95812929	95812929	8553170	3	182,122,143,	0,538,2188,
#Partially deleted in new
chr11	95812976	95818032	chr11:95812976-95818032	0	+	95812976	95812976	8553170	3	135,122,246,	0,491,4810,
#Partially deleted in new
chr11	95817819	95828027	chr11:95817819-95828027	0	+	95817819	95828027	789624	3	84,78,242,	0,1007,9966,
#Partially deleted in new
chr11	95817836	95831145	chr11:95817836-95831145	0	+	95817836	95831145	789624	6	67,78,108,242,145,120,	0,990,4034,9949,11350,13189,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	95825682	95831167	chr11:95825682-95831167	0	+	95825682	95825682	8553170	3	2345,145,142,	0,3504,5343,
#Partially deleted in new
chr11	95832881	95924295	chr11:95832881-95924295	3	-	95835289	95923954	0	15	2570,177,114,93,207,186,189,150,84,102,111,95,76,106,421,	0,3266,5212,8735,12071,14832,16792,17718,24670,25649,29110,29390,32719,55274,90993,
#Partially deleted in new
chr11	95832881	95924295	chr11:95832881-95924295	1	-	95835289	95865646	0	15	2570,177,114,93,207,186,189,150,84,102,111,95,76,106,421,	0,3266,5212,8735,12071,14832,16792,17718,24670,25649,29110,29390,32719,55274,90993,
#Partially deleted in new
chr11	95834087	95924096	chr11:95834087-95924096	1	-	95835289	95865646	0	17	1364,177,114,93,207,186,189,150,84,102,111,95,76,73,106,71,222,	0,2060,4006,7529,10865,13626,15586,16512,23464,24443,27904,28184,31513,53524,54068,80154,89787,
#Partially deleted in new
chr11	95834088	95924100	chr11:95834088-95924100	1	-	95835289	95865646	0	16	1363,177,114,93,207,186,189,150,84,102,111,95,76,106,71,226,	0,2059,4005,7528,10864,13625,15585,16511,23463,24442,27903,28183,31512,54067,80153,89786,
#Partially deleted in new
chr11	95835335	95913077	chr11:95835335-95913077	0	-	95835335	95865646	789624	16	116,177,114,93,207,186,189,150,84,102,111,95,76,73,106,139,	0,812,2758,6281,9617,12378,14338,15264,22216,23195,26656,26936,30265,52276,52820,77603,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	95840016	95840124	chr11:95840016-95840124	7	-	95840016	95840016	16724991	1	108,	0,
#Partially deleted in new
chr11	95850611	95923818	chr11:95850611-95923818	0	-	95850611	95850611	8553170	8	138,84,102,111,95,76,106,127,	0,6940,7919,11380,11660,14989,37544,73080,
#Partially deleted in new
chr11	95861991	95923868	chr11:95861991-95923868	0	-	95861991	95861991	8553170	7	111,95,76,148,106,71,177,	0,280,3609,25620,26164,52250,61700,
#Partially deleted in new
chr11	95862072	95923865	chr11:95862072-95923865	0	-	95862072	95862072	8553170	6	30,95,237,106,71,174,	0,199,3367,26083,52169,61619,
#Partially deleted in new
chr11	95862087	95888261	chr11:95862087-95888261	0	-	95862087	95862087	8553170	5	15,95,237,73,106,	0,184,3352,25524,26068,
#Partially deleted in new
chr11	95862291	95923763	chr11:95862291-95923763	0	-	95862291	95862291	8553170	7	75,76,84,73,106,71,72,	0,3309,4111,25320,25864,51950,61400,
#Partially deleted in new
chr11	95866425	95924107	chr11:95866425-95924107	0	-	95866425	95866425	8553170	5	61,73,106,71,233,	0,21186,21730,47816,57449,
#Partially deleted in new
chr11	95887609	95925270	chr11:95887609-95925270	0	-	95887609	95887609	8553170	5	75,106,71,126,190,	0,546,26632,36265,37471,
#Partially deleted in new
chr11	95887611	95923868	chr11:95887611-95923868	0	-	95887611	95887611	8553170	4	73,106,71,177,	0,544,26630,36080,
#Deleted in new
chr11	95924478	95925315	chr11:95924478-95925315	0	-	95924478	95924478	8553170	2	298,235,	0,602,
#Deleted in new
chr11	95963218	95963624	chr11:95963218-95963624	7	+	95963218	95963218	16724991	1	406,	0,
#Partially deleted in new
chr11	95976597	96343180	chr11:95976597-96343180	3	-	95978947	96341895	789624	5	3366,112,204,1626,1798,	0,8933,14922,115294,364785,
#Partially deleted in new
chr11	95978754	96093520	chr11:95978754-96093520	1	-	95978947	96093520	789624	4	1209,112,204,1629,	0,6776,12765,113137,
#Deleted in new
chr11	96341437	96341526	chr11:96341437-96341526	3	+	96341437	96341437	5263520	1	89,	0,
#Partially deleted in new
chr11	96352768	96387904	chr11:96352768-96387904	1	-	96353645	96384747	789624	9	946,186,171,125,93,205,800,40,375,	0,6224,12211,18244,20606,30500,31193,33485,34761,
#Partially deleted in new
chr11	96352775	96389954	chr11:96352775-96389954	3	-	96353645	96384747	789624	10	939,186,171,125,93,205,800,40,84,111,	0,6217,12204,18237,20599,30493,31186,33478,34754,37068,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	96352776	96389922	chr11:96352776-96389922	1	-	96353645	96384747	789624	9	938,186,171,125,93,205,2332,84,79,	0,6216,12203,18236,20598,30492,31185,34753,37067,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	96352776	96389887	chr11:96352776-96389887	1	-	96353645	96384747	789624	7	938,186,171,125,93,205,5926,	0,6216,12203,18236,20598,30492,31185,
#Partially deleted in new
chr11	96352778	96389891	chr11:96352778-96389891	1	-	96353645	96384747	789624	12	936,186,171,125,93,205,800,84,40,84,159,48,	0,6214,12201,18234,20596,30490,31183,33158,33475,34751,36586,37065,
#Partially deleted in new
chr11	96352778	96389948	chr11:96352778-96389948	1	-	96353645	96384747	789624	11	936,186,171,125,93,205,800,40,84,135,105,	0,6214,12201,18234,20596,30490,31183,33475,34751,35916,37065,
#Partially deleted in new
chr11	96352778	96389816	chr11:96352778-96389816	1	-	96353645	96384747	789624	10	936,186,171,125,93,205,800,40,84,1434,	0,6214,12201,18234,20596,30490,31183,33475,34751,35604,
#Partially deleted in new
chr11	96352786	96389921	chr11:96352786-96389921	1	-	96353645	96384747	789624	10	928,186,24,125,93,205,800,40,84,78,	0,6206,12340,18226,20588,30482,31175,33467,34743,37057,
#Partially deleted in new
chr11	96352804	96389921	chr11:96352804-96389921	1	-	96353645	96384747	789624	10	910,105,171,125,93,205,800,40,84,78,	0,6188,12175,18208,20570,30464,31157,33449,34725,37039,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	96353249	96389936	chr11:96353249-96389936	1	-	96358571	96384747	789624	10	5370,186,171,125,93,205,800,40,84,93,	0,5743,11730,17763,20125,30019,30712,33004,34280,36594,
#Partially deleted in new
chr11	96353447	96359282	chr11:96353447-96359282	0	-	96353447	96353447	8553170	2	267,290,	0,5545,
#Partially deleted in new
chr11	96353645	96384990	chr11:96353645-96384990	1	-	96353645	96384747	789624	7	69,186,171,125,93,205,1029,	0,5347,11334,17367,19729,29623,30316,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	96363127	96389921	chr11:96363127-96389921	0	-	96363127	96363127	8553170	7	2023,125,93,205,2332,84,78,	0,7885,10247,20141,20834,24402,26716,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	96363131	96389566	chr11:96363131-96389566	0	-	96363131	96363131	8553170	5	2019,125,93,205,5605,	0,7881,10243,20137,20830,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	96363131	96389921	chr11:96363131-96389921	0	-	96363131	96363131	8553170	8	2019,125,93,205,800,40,84,78,	0,7881,10243,20137,20830,23122,24398,26712,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	96380538	96389956	chr11:96380538-96389956	1	-	96383224	96384747	789624	5	2935,800,40,84,113,	0,3423,5715,6991,9305,
#Partially deleted in new
chr11	96383960	96389412	chr11:96383960-96389412	0	-	96383960	96384747	789624	2	801,48,	0,5404,
#Partially deleted in new
chr11	96384657	96386301	chr11:96384657-96386301	0	-	96384657	96384747	789624	3	104,84,48,	0,1279,1596,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	96385965	96389923	chr11:96385965-96389923	0	-	96385965	96385965	8553170	3	328,84,80,	0,1564,3878,
#Partially deleted in new
chr11	96387139	96389919	chr11:96387139-96389919	0	-	96387139	96387139	8553170	2	474,76,	0,2704,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	96389988	96507574	chr11:96389988-96507574	0	+	96389988	96389988	8553170	3	85,113,538,	0,14290,117048,
#Partially deleted in new
chr11	96389993	96393257	chr11:96389993-96393257	3	+	96390649	96392224	789624	2	80,2775,	0,489,
#Partially deleted in new
chr11	96508424	96514748	chr11:96508424-96514748	3	+	96508424	96508424	789624	4	57,83,11,253,	0,2503,3645,6071,
#Partially deleted in new
chr11	96642670	96643225	chr11:96642670-96643225	7	-	96642670	96642670	16724991	1	555,	0,
#Deleted in new
chr11	97000273	97000711	chr11:97000273-97000711	7	-	97000273	97000273	16724991	1	438,	0,
#Deleted in new
chr11	97086159	97086682	chr11:97086159-97086682	7	-	97086159	97086159	16724991	1	523,	0,
#Partially deleted in new
chr11	97222643	97259987	chr11:97222643-97259987	3	-	97222643	97222643	8553170	3	377,217,140,	0,36802,37204,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	97657463	97657582	chr11:97657463-97657582	7	+	97657463	97657463	16724991	1	119,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	97878780	97942762	chr11:97878780-97942762	3	-	97878780	97878780	8553170	4	121,205,63,157,	0,12307,58247,63825,
#Deleted in new
chr11	97908252	97908537	chr11:97908252-97908537	7	-	97908252	97908252	16724991	1	285,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	97918422	97942762	chr11:97918422-97942762	1	-	97918422	97918422	8553170	3	554,63,157,	0,18605,24183,
#Deleted in new
chr11	98130238	98131198	chr11:98130238-98131198	7	-	98130238	98130238	16724991	1	960,	0,
#Deleted in new
chr11	98565073	98566827	chr11:98565073-98566827	7	-	98565073	98565073	16724991	1	1754,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	98938911	98945079	chr11:98938911-98945079	3	-	98938911	98938911	8553170	2	342,38,	0,6130,
#Partially deleted in new
chr11	99020952	99049844	chr11:99020952-99049844	0	+	99020952	99020952	8553170	2	318,254,	0,28638,
#Partially deleted in new
chr11	99020975	100225447	chr11:99020975-100225447	0	+	99020975	99020975	8553170	16	295,139,125,222,124,176,96,204,103,182,137,130,151,128,176,756,	0,304370,535169,798568,823876,824111,895078,935830,981058,1040236,1049448,1050729,1053168,1170150,1172512,1203716,
#Partially deleted in new
chr11	99021140	100309702	chr11:99021140-100309702	1	+	99556214	100308474	0	21	130,139,125,222,124,176,96,204,103,182,137,130,151,128,176,121,159,150,71,235,1344,	0,304205,535004,798403,823711,823946,894913,935665,980893,1040071,1049283,1050564,1053003,1169985,1172347,1203551,1234619,1249951,1276484,1278021,1287218,
#Partially deleted in new
chr11	99021189	100358885	chr11:99021189-100358885	3	+	99556214	100356220	0	25	81,139,125,222,124,176,96,204,103,182,137,130,151,128,176,121,159,150,71,235,110,187,113,169,2769,	0,304156,534955,798354,823662,823897,894864,935616,980844,1040022,1049234,1050515,1052954,1169936,1172298,1203502,1234570,1249902,1276435,1277972,1287169,1319273,1319903,1329512,1334927,
#Partially deleted in new
chr11	99021189	100356566	chr11:99021189-100356566	1	+	99556214	100356220	0	24	81,125,222,124,176,96,204,103,182,137,130,151,128,176,121,159,150,71,235,110,187,113,169,450,	0,534955,798354,823662,823897,894864,935616,980844,1040022,1049234,1050515,1052954,1169936,1172298,1203502,1234570,1249902,1276435,1277972,1287169,1319273,1319903,1329512,1334927,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	99120175	99120490	chr11:99120175-99120490	3	+	99120175	99120175	8553170	1	315,	0,
#Partially deleted in new
chr11	99556138	100356742	chr11:99556138-100356742	1	+	99556214	100356220	0	22	131,124,176,96,204,103,182,137,130,151,128,176,121,159,150,71,235,110,187,113,169,626,	0,288713,288948,359915,400667,445895,505073,514285,515566,518005,634987,637349,668553,699621,714953,741486,743023,752220,784324,784954,794563,799978,
#Partially deleted in new
chr11	99556145	99558334	chr11:99556145-99558334	0	+	99556145	99556145	8553170	2	124,122,	0,2067,
#Partially deleted in new
chr11	99819531	100358885	chr11:99819531-100358885	1	+	99819536	100356220	789624	22	234,124,176,96,204,103,182,137,130,151,128,176,121,159,150,71,235,110,187,113,169,2769,	0,25320,25555,96522,137274,182502,241680,250892,252173,254612,371594,373956,405160,436228,451560,478093,479630,488827,520931,521561,531170,536585,
#Partially deleted in new
chr11	99844807	100358885	chr11:99844807-100358885	1	+	99844807	100356220	789624	22	39,128,176,96,204,103,182,137,130,151,128,176,121,159,150,71,235,110,187,113,169,2769,	0,40,279,71246,111998,157226,216404,225616,226897,229336,346318,348680,379884,410952,426284,452817,454354,463551,495655,496285,505894,511309,
#Partially deleted in new
chr11	99956805	100003968	chr11:99956805-100003968	0	+	99956805	99956805	8553170	3	204,103,167,	0,45228,46996,
#Partially deleted in new
chr11	100070400	100074406	chr11:100070400-100074406	0	+	100070400	100070400	8553170	3	160,130,263,	0,1304,3743,
#Partially deleted in new
chr11	100191176	100356289	chr11:100191176-100356289	0	+	100191176	100191176	8553170	11	77,176,159,150,71,235,110,187,113,169,173,	0,2311,64583,79915,106448,107985,117182,149286,149916,159525,164940,
#Deleted in new
chr11	100336855	100337625	chr11:100336855-100337625	7	+	100336855	100336855	16724991	1	770,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	100641974	100642273	chr11:100641974-100642273	3	-	100641974	100641974	8553170	1	299,	0,
#Deleted in new
chr11	100666458	100666962	chr11:100666458-100666962	7	+	100666458	100666458	16724991	1	504,	0,
#Partially deleted in new
chr11	100684161	100687955	chr11:100684161-100687955	3	-	100684161	100684161	789624	2	1542,323,	0,3471,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr11	100687652	100993941	chr11:100687652-100993941	1	+	100687678	100988801	789624	23	180,96,62,72,111,105,130,101,110,79,40,63,75,85,59,106,160,145,381,157,63,80,5229,	0,82690,107452,171901,233841,245503,248550,254131,256106,260804,262264,272230,273262,274031,274756,278018,285522,286806,288404,289162,291334,299860,301060,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr11	100687675	100990925	chr11:100687675-100990925	3	+	100687678	100988801	789624	24	157,96,62,72,102,111,105,130,101,110,79,40,63,75,85,59,106,160,145,381,157,63,80,2213,	0,82667,107429,171878,225776,233818,245480,248527,254108,256083,260781,262241,272207,273239,274008,274733,277995,285499,286783,288381,289139,291311,299837,301037,
#Partially deleted in new
chr11	100738442	100913524	chr11:100738442-100913524	0	+	100738442	100738442	8553170	6	56,96,62,142,72,73,	0,31900,56662,78272,121111,175009,
#Partially deleted in new
chr11	100770340	100913526	chr11:100770340-100913526	0	+	100770340	100770340	8553170	5	98,62,142,72,75,	0,24764,46374,89213,143111,
#Partially deleted in new
chr11	100770365	100859907	chr11:100770365-100859907	0	+	100770365	100770365	8553170	3	73,62,354,	0,24739,89188,
#Partially deleted in new
chr11	100839403	100859629	chr11:100839403-100859629	0	+	100839403	100839403	8553170	4	189,112,62,76,	0,1156,19957,20150,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	100839629	100839946	chr11:100839629-100839946	3	+	100839629	100839629	8553170	1	317,	0,
#Partially deleted in new
chr11	100913499	100948535	chr11:100913499-100948535	0	+	100913499	100948535	789624	7	54,111,105,130,101,110,79,	0,7994,19656,22703,28284,30259,34957,
#Partially deleted in new
chr11	100959849	100988869	chr11:100959849-100988869	0	+	100959849	100986077	789624	13	96,75,85,59,106,160,145,381,157,63,279,80,157,	0,1065,1834,2559,5821,13325,14609,16207,16965,19137,26224,27663,28863,
#Deleted in new
chr11	100992079	100993934	chr11:100992079-100993934	1	+	100992308	100992698	789624	1	1855,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	101029623	101130524	chr11:101029623-101130524	3	-	101039115	101129070	0	8	9648,158,131,145,306,117,152,3091,	0,12321,20305,21800,32823,62136,96383,97810,
#Partially deleted in new
chr11	101038679	101129727	chr11:101038679-101129727	1	-	101039115	101126013	0	8	592,158,131,145,306,117,152,300,	0,3265,11249,12744,23767,53080,87327,90748,
#Partially deleted in new
chr11	101039060	101064025	chr11:101039060-101064025	0	-	101039060	101039060	8553170	5	211,158,131,145,1579,	0,2884,10868,12363,23386,
#Partially deleted in new
chr11	101039115	101129070	chr11:101039115-101129070	1	-	101039115	101129070	0	7	156,158,131,145,117,152,1637,	0,2829,10813,12308,52644,86891,88318,
#Partially deleted in new
chr11	101039115	101129070	chr11:101039115-101129070	0	-	101042065	101129070	789624	6	156,158,145,117,152,1637,	0,2829,12308,52644,86891,88318,
#Partially deleted in new
chr11	101039115	101129070	chr11:101039115-101129070	0	-	101049952	101129070	789624	7	156,158,79,145,306,152,1637,	0,2829,10813,12308,23331,86891,88318,
#Partially deleted in new
chr11	101039115	101129070	chr11:101039115-101129070	0	-	101049952	101129070	789624	8	156,158,79,145,306,117,152,1637,	0,2829,10813,12308,23331,52644,86891,88318,
#Partially deleted in new
chr11	101041660	101051470	chr11:101041660-101051470	0	-	101041660	101041660	8553170	3	442,131,47,	0,8268,9763,
#Partially deleted in new
chr11	101049933	101129813	chr11:101049933-101129813	1	-	101049933	101129070	789624	6	21,1,145,117,152,2380,	0,1015,1490,41826,76073,77500,
#Partially deleted in new
chr11	101049952	101129813	chr11:101049952-101129813	1	-	101049952	101129070	789624	5	55,145,306,152,2380,	0,1471,12494,76054,77481,
#Partially deleted in new
chr11	101062568	101127088	chr11:101062568-101127088	0	-	101062568	101127049	789624	4	184,117,152,98,	0,29191,63438,64422,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	101129076	101198910	chr11:101129076-101198910	3	+	101129076	101129076	8553170	7	812,94,115,90,97,155,182,	0,1612,3934,19066,30082,66408,69652,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	101148149	101209591	chr11:101148149-101209591	0	+	101148149	101148149	8553170	3	83,97,249,	0,11009,61193,
#Deleted in new
chr11	101208904	101209450	chr11:101208904-101209450	7	+	101208904	101208904	16724991	1	546,	0,
#Partially deleted in new
chr11	101451563	101583928	chr11:101451563-101583928	3	-	101452954	101583503	0	13	1543,76,84,75,204,196,265,234,217,165,183,775,595,	0,2086,3454,17863,19619,20573,21945,24737,31385,37373,39992,52460,131770,
#Partially deleted in new
chr11	101452871	101583506	chr11:101452871-101583506	1	-	101452954	101583503	789624	12	235,76,84,75,204,196,265,217,165,183,775,173,	0,778,2146,16555,18311,19265,20637,30077,36065,38684,51152,130462,
#Partially deleted in new
chr11	101452954	101583503	chr11:101452954-101583503	1	-	101452954	101583503	0	11	152,76,84,75,204,196,265,234,217,775,170,	0,695,2063,16472,18228,19182,20554,23346,29994,51069,130379,
#Partially deleted in new
chr11	101452954	101583503	chr11:101452954-101583503	1	-	101452954	101583503	0	12	152,76,84,75,204,196,265,234,217,183,775,170,	0,695,2063,16472,18228,19182,20554,23346,29994,38601,51069,130379,
#Deleted in new
chr11	101453640	101455577	chr11:101453640-101455577	0	-	101453640	101453640	8553170	2	85,560,	0,1377,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	101491380	101504090	chr11:101491380-101504090	0	-	101491380	101491380	8553170	2	358,67,	0,12643,
#Partially deleted in new
chr11	101504704	101872562	chr11:101504704-101872562	0	-	101504704	101504704	8553170	2	94,265,	0,367593,
#Deleted in new
chr11	101519819	101519905	chr11:101519819-101519905	3	-	101519819	101519819	5263520	1	86,	0,
#Partially deleted in new
chr11	101584294	101595156	chr11:101584294-101595156	7	+	101584294	101584294	16724991	3	830,64,1477,	0,1430,9385,
#Deleted in new
chr11	101594019	101594934	chr11:101594019-101594934	5	+	101594019	101594019	16724991	1	915,	0,
#Partially deleted in new
chr11	101765934	101769961	chr11:101765934-101769961	7	-	101765934	101765934	16724991	2	1234,429,	0,3598,
#Partially deleted in new
chr11	101890673	101916522	chr11:101890673-101916522	3	-	101891278	101907909	789624	9	925,186,121,101,94,104,145,188,504,	0,4205,9756,11947,14140,15070,16429,17140,25345,
#Partially deleted in new
chr11	101894954	101907934	chr11:101894954-101907934	0	-	101894954	101907909	789624	5	110,121,104,145,121,	0,5475,10789,12148,12859,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	101915014	102001058	chr11:101915014-102001058	3	+	101915284	101997643	789624	11	398,120,146,112,199,2140,113,76,210,65,3460,	0,7626,29250,33016,43153,46726,63332,66874,71817,77763,82584,
#Partially deleted in new
chr11	101944374	101998028	chr11:101944374-101998028	0	+	101944374	101956941	789624	10	36,112,1152,199,2140,113,76,210,65,430,	0,3656,11417,13793,17366,33972,37514,42457,48403,53224,
#Partially deleted in new
chr11	101978401	101998030	chr11:101978401-101998030	0	+	101978401	101997643	789624	4	58,76,65,432,	0,3487,14376,19197,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	102047442	102084560	chr11:102047442-102084560	3	+	102047470	102083199	789624	7	138,82,76,167,173,67,1490,	0,372,11437,19042,28430,33772,35628,
#Partially deleted in new
chr11	102047454	102081435	chr11:102047454-102081435	1	+	102047470	102081332	789624	6	126,82,76,167,173,221,	0,360,11425,19030,28418,33760,
#Partially deleted in new
chr11	102047457	102076111	chr11:102047457-102076111	1	+	102047470	102075904	789624	4	123,82,76,239,	0,357,11422,28415,
#Partially deleted in new
chr11	102047467	102083419	chr11:102047467-102083419	0	+	102047467	102047467	8553170	6	429,76,167,173,67,349,	0,11412,19017,28405,33747,35603,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	102057853	102057960	chr11:102057853-102057960	3	+	102057853	102057853	8553170	1	107,	0,
#Partially deleted in new
chr11	102066541	102076111	chr11:102066541-102076111	0	+	102066541	102076049	789624	2	110,239,	0,9331,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	102107885	102109842	chr11:102107885-102109842	3	+	102107885	102107885	8553170	1	1957,	0,
#Deleted in new
chr11	102109826	102110457	chr11:102109826-102110457	3	-	102109826	102109826	8553170	1	631,	0,
#Partially deleted in new
chr11	102110460	102233423	chr11:102110460-102233423	3	+	102110848	102229940	0	9	709,251,116,114,182,48,131,113,3722,	0,3683,51995,75557,95432,99056,113161,117008,119241,
#Partially deleted in new
chr11	102110460	102233423	chr11:102110460-102233423	1	+	102110848	102229940	0	8	709,251,116,194,48,131,113,3722,	0,3683,51995,95432,99056,113161,117008,119241,
#Partially deleted in new
chr11	102110460	102230592	chr11:102110460-102230592	1	+	102110848	102229940	0	7	709,251,116,182,131,113,891,	0,3683,51995,95432,113161,117008,119241,
#Partially deleted in new
chr11	102110460	102233423	chr11:102110460-102233423	1	+	102110848	102229940	0	8	709,251,116,114,194,131,113,3722,	0,3683,51995,75557,95432,113161,117008,119241,
#Partially deleted in new
chr11	102110460	102233423	chr11:102110460-102233423	1	+	102110848	102229940	0	9	709,251,116,114,194,48,131,113,3722,	0,3683,51995,75557,95432,99056,113161,117008,119241,
#Partially deleted in new
chr11	102110848	102229963	chr11:102110848-102229963	1	+	102110848	102229940	0	8	321,251,116,114,182,131,113,262,	0,3295,51607,75169,95044,112773,116620,118853,
#Partially deleted in new
chr11	102110848	102229940	chr11:102110848-102229940	1	+	102110848	102229940	0	7	321,251,116,194,131,113,239,	0,3295,51607,95044,112773,116620,118853,
#Partially deleted in new
chr11	102112513	102230152	chr11:102112513-102230152	1	+	102114356	102229940	0	9	232,251,116,114,182,48,131,113,451,	0,1630,49942,73504,93379,97003,111108,114955,117188,
#Partially deleted in new
chr11	102162455	102186686	chr11:102162455-102186686	0	+	102162455	102162455	8553170	2	116,669,	0,23562,
#Partially deleted in new
chr11	102186080	102230579	chr11:102186080-102230579	0	+	102186080	102229940	789624	6	51,194,48,131,113,878,	0,19812,23436,37541,41388,43621,
#Partially deleted in new
chr11	102226972	102230502	chr11:102226972-102230502	0	+	102226972	102226972	8553170	3	111,113,801,	0,496,2729,
#Deleted in new
chr11	102229850	102230922	chr11:102229850-102230922	3	-	102229850	102229850	8553170	2	432,196,	0,876,
#Deleted in new
chr11	102295059	102295806	chr11:102295059-102295806	7	+	102295059	102295059	16724991	1	747,	0,
#Deleted in new
chr11	102306111	102306271	chr11:102306111-102306271	7	+	102306111	102306111	16724991	1	160,	0,
#Partially deleted in new
chr11	102308556	102308797	chr11:102308556-102308797	7	-	102308556	102308556	16724991	1	241,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	102313721	102313829	chr11:102313721-102313829	3	+	102313721	102313721	8553170	1	108,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	102317449	102339394	chr11:102317449-102339394	3	+	102324509	102337102	0	10	122,59,907,100,79,49,243,255,42,2486,	0,4387,7006,8016,10602,11447,13549,18516,19310,19459,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	102317483	102322242	chr11:102317483-102322242	0	+	102317483	102317483	8553170	3	88,130,406,	0,2393,4353,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	102317494	102337734	chr11:102317494-102337734	1	+	102324509	102337102	0	9	77,3526,100,79,49,243,255,42,826,	0,4342,7971,10557,11402,13504,18471,19265,19414,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	102317501	102322128	chr11:102317501-102322128	0	+	102317501	102317501	8553170	4	70,130,115,292,	0,2375,2784,4335,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	102317562	102339403	chr11:102317562-102339403	1	+	102324509	102337102	0	10	9,64,902,100,79,49,243,255,42,2495,	0,4274,6898,7903,10489,11334,13436,18403,19197,19346,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	102325220	102331054	chr11:102325220-102331054	0	+	102325220	102331054	789624	6	142,100,123,79,49,56,	0,245,1508,2831,3676,5778,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	102336520	102337291	chr11:102336520-102337291	0	+	102336520	102336520	8553170	2	281,383,	0,388,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	102347210	102349013	chr11:102347210-102349013	0	+	102347210	102347210	8553170	3	166,127,416,	0,1070,1387,
#Partially deleted in new
chr11	102347213	102378236	chr11:102347213-102378236	1	+	102350001	102378183	0	9	163,749,100,79,49,243,255,42,247,	0,2787,3630,15682,16454,21092,30282,30643,30776,
#Partially deleted in new
chr11	102347213	102350565	chr11:102347213-102350565	0	+	102348702	102350565	789624	3	163,122,220,	0,1384,3132,
#Partially deleted in new
chr11	102347216	102350235	chr11:102347216-102350235	0	+	102347216	102347216	8553170	3	160,167,235,	0,1381,2784,
#Partially deleted in new
chr11	102347223	102377691	chr11:102347223-102377691	0	+	102362914	102377691	789624	5	153,79,49,243,196,	0,15672,16444,21082,30272,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	102347234	102378670	chr11:102347234-102378670	3	+	102349854	102378183	0	9	142,2152,100,79,49,243,255,42,681,	0,1363,3609,15661,16433,21071,30261,30622,30755,
#Partially deleted in new
chr11	102347246	102378669	chr11:102347246-102378669	1	+	102349917	102378183	789624	10	130,167,872,100,79,49,243,255,42,680,	0,1351,2631,3597,15649,16421,21059,30249,30610,30743,
#Partially deleted in new
chr11	102347252	102378140	chr11:102347252-102378140	0	+	102377524	102378140	789624	4	124,255,42,151,	0,30243,30604,30737,
#Partially deleted in new
chr11	102347268	102350364	chr11:102347268-102350364	0	+	102349917	102350364	789624	2	108,487,	0,2609,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	102347373	102378670	chr11:102347373-102378670	0	+	102347373	102347373	8553170	9	472,2152,100,79,49,243,255,42,681,	0,1224,3470,15522,16294,20932,30122,30483,30616,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	102347373	102378663	chr11:102347373-102378663	1	+	102349854	102378183	0	9	472,2152,100,79,49,243,255,42,674,	0,1224,3470,15522,16294,20932,30122,30483,30616,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	102347373	102377913	chr11:102347373-102377913	1	+	102349854	102377913	789624	8	472,2152,100,79,49,243,221,15,	0,1224,3470,15522,16294,20932,30122,30525,
#Partially deleted in new
chr11	102349974	102363679	chr11:102349974-102363679	0	+	102349974	102362909	789624	3	775,79,12,	0,12921,13693,
#Partially deleted in new
chr11	102362741	102377597	chr11:102362741-102377597	0	+	102362741	102362741	8553170	4	233,49,243,102,	0,926,5564,14754,
#Partially deleted in new
chr11	102396331	102452839	chr11:102396331-102452839	1	-	102398866	102452623	789624	4	2560,154,291,316,	0,5207,5584,56192,
#Partially deleted in new
chr11	102396335	102453044	chr11:102396335-102453044	3	-	102398866	102452623	789624	5	2556,154,291,57,521,	0,5203,5580,52476,56188,
#Partially deleted in new
chr11	102398823	102452366	chr11:102398823-102452366	1	-	102398866	102402099	789624	5	68,154,291,57,173,	0,2715,3092,49988,53370,
#Partially deleted in new
chr11	102398855	102451231	chr11:102398855-102451231	0	-	102398866	102402099	789624	5	36,154,291,57,30,	0,2683,3060,49956,52346,
#Partially deleted in new
chr11	102401743	102452552	chr11:102401743-102452552	0	-	102401743	102401743	8553170	3	463,57,29,	0,47068,50780,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	102401924	102470384	chr11:102401924-102470384	0	-	102401924	102401924	8553170	3	282,57,211,	0,46887,68249,
#Partially deleted in new
chr11	102402033	102449452	chr11:102402033-102449452	0	-	102402033	102402099	789624	3	173,57,338,	0,46778,47081,
#Partially deleted in new
chr11	102402098	102452355	chr11:102402098-102452355	0	-	102402098	102448266	789624	4	108,140,57,162,	0,46137,46713,50095,
#Partially deleted in new
chr11	102452918	102462008	chr11:102452918-102462008	3	+	102452918	102452918	789624	2	131,561,	0,8529,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	102467254	102498801	chr11:102467254-102498801	3	+	102467254	102467254	789624	3	114,85,295,	0,26525,31252,
#Partially deleted in new
chr11	102520507	102530753	chr11:102520507-102530753	3	-	102520775	102530700	0	6	297,162,129,149,227,161,	0,2732,4428,7016,7249,10085,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	102524275	102530750	chr11:102524275-102530750	0	-	102524275	102524275	8553170	4	789,149,227,158,	0,3248,3481,6317,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	102526985	102530747	chr11:102526985-102530747	0	-	102526985	102526985	8553170	3	687,227,155,	0,771,3607,
#Partially deleted in new
chr11	102576834	102625332	chr11:102576834-102625332	3	-	102577325	102625319	0	10	592,104,157,137,142,162,126,149,248,139,	0,2204,16604,17786,29700,32102,33070,34920,39977,48359,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	102594687	102607850	chr11:102594687-102607850	0	-	102594687	102594687	8553170	5	70,183,142,112,155,	0,10558,11847,12241,13008,
#Partially deleted in new
chr11	102681309	102683913	chr11:102681309-102683913	3	+	102681309	102681309	8553170	3	65,67,589,	0,512,2015,
#Partially deleted in new
chr11	102691486	102705806	chr11:102691486-102705806	3	-	102691765	102705714	789624	10	524,104,160,131,121,162,129,149,239,194,	0,1451,2419,3480,4884,5187,11266,11483,13050,14126,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	102711794	102724954	chr11:102711794-102724954	3	-	102713347	102724855	0	10	1663,104,154,134,118,162,126,149,245,201,	0,1959,2761,3509,4507,6619,9606,9819,10634,12959,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	102712631	102727050	chr11:102712631-102727050	0	-	102723069	102724855	789624	12	826,104,154,134,118,162,126,149,245,88,250,67,	0,1122,1924,2672,3670,5782,8769,8982,9797,10359,12122,14352,
#Partially deleted in new
chr11	102713129	102724781	chr11:102713129-102724781	0	-	102713786	102724781	789624	9	328,104,134,118,162,126,149,245,28,	0,624,2174,3172,5284,8271,8484,9299,11624,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	102721468	102724941	chr11:102721468-102724941	0	-	102722671	102724855	789624	5	58,149,245,67,188,	0,145,960,2011,3285,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	102722499	102724952	chr11:102722499-102724952	0	-	102723076	102724855	789624	4	174,88,67,199,	0,491,980,2254,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	102722542	102724954	chr11:102722542-102724954	0	-	102723915	102724855	789624	5	131,88,67,111,201,	0,448,937,1292,2211,
#Partially deleted in new
chr11	102751069	102754943	chr11:102751069-102754943	7	-	102751069	102751069	16724991	7	107,101,163,126,148,238,117,	0,253,981,2317,2638,2886,3757,
#Partially deleted in new
chr11	102752122	102753452	chr11:102752122-102753452	4	-	102752122	102752122	16724991	2	91,66,	0,1264,
#Deleted in new
chr11	102766800	102767927	chr11:102766800-102767927	7	-	102766800	102766800	16724991	1	1127,	0,
#Partially deleted in new
chr11	102770502	102780628	chr11:102770502-102780628	3	-	102770792	102780591	0	10	391,104,160,134,145,165,126,149,242,142,	0,1509,2344,4685,5777,6109,8121,8710,9001,9984,
#Partially deleted in new
chr11	102778668	102780628	chr11:102778668-102780628	0	-	102778668	102780591	789624	4	48,149,242,142,	0,544,835,1818,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	102783675	102836766	chr11:102783675-102836766	5	+	102783675	102783675	16724991	8	389,117,77,99,79,1439,113,329,	0,9469,11472,14348,47056,47792,49776,52762,
#Partially deleted in new
chr11	102783720	102831533	chr11:102783720-102831533	4	+	102783720	102783720	16724991	4	344,99,79,27,	0,14303,47011,47786,
#Partially deleted in new
chr11	102789919	102798160	chr11:102789919-102798160	3	-	102790411	102798092	0	10	602,104,163,134,118,156,126,149,245,173,	0,783,1413,2685,5254,5532,6744,7094,7336,8068,
#Deleted in new
chr11	102806947	102807916	chr11:102806947-102807916	7	-	102806947	102806947	16724991	1	969,	0,
#Deleted in new
chr11	102831702	102832102	chr11:102831702-102832102	5	+	102831702	102831702	16724991	1	400,	0,
#Deleted in new
chr11	102835800	102843803	chr11:102835800-102843803	3	-	102836125	102843546	0	10	426,104,160,134,145,165,126,149,245,362,	0,1497,2750,3309,4307,4628,6353,6630,6871,7641,
#Deleted in new
chr11	102836496	102838710	chr11:102836496-102838710	0	-	102836496	102838710	789624	3	32,104,160,	0,801,2054,
#Deleted in new
chr11	102842251	102843607	chr11:102842251-102843607	0	-	102842863	102843546	789624	4	28,149,245,137,	0,179,420,1219,
#Partially deleted in new
chr11	102862735	102875034	chr11:102862735-102875034	3	-	102863099	102874937	0	10	465,107,160,134,124,162,126,149,248,199,	0,1410,3040,3579,4534,5172,8858,9068,10129,12100,
#Partially deleted in new
chr11	102880491	102880846	chr11:102880491-102880846	7	+	102880491	102880491	16724991	1	355,	0,
#Deleted in new
chr11	102903891	102903953	chr11:102903891-102903953	3	-	102903891	102903891	8553170	1	62,	0,
#Partially deleted in new
chr11	102942994	102955734	chr11:102942994-102955734	3	-	102944265	102955705	0	10	1372,104,160,134,118,162,126,149,242,149,	0,2651,4896,6030,7115,9017,11161,11463,12257,12591,
#Partially deleted in new
chr11	102944142	102955705	chr11:102944142-102955705	1	-	102944142	102955705	789624	9	13,88,134,118,162,126,149,242,120,	0,3820,4882,5967,7869,10013,10315,11109,11443,
#Partially deleted in new
chr11	102963459	102966628	chr11:102963459-102966628	7	-	102963459	102963459	16724991	3	82,169,121,	0,528,3048,
#Deleted in new
chr11	103045236	103045712	chr11:103045236-103045712	7	+	103045236	103045236	16724991	1	476,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	103050686	103055799	chr11:103050686-103055799	3	-	103050686	103050686	8553170	1	5113,	0,
#Partially deleted in new
chr11	103062075	103089318	chr11:103062075-103089318	0	-	103062297	103089318	789624	6	339,105,109,92,71,92,	0,4193,4383,20672,21180,27151,
#Partially deleted in new
chr11	103062078	103092215	chr11:103062078-103092215	3	-	103062358	103091872	789624	8	336,103,105,109,92,71,92,429,	0,2196,4190,4380,20669,21177,27148,29708,
#Partially deleted in new
chr11	103062097	103092161	chr11:103062097-103092161	0	-	103091668	103091872	789624	8	317,103,105,109,92,71,92,646,	0,2177,4171,4361,20650,21158,27129,29418,
#Partially deleted in new
chr11	103062104	103092189	chr11:103062104-103092189	1	-	103062358	103091872	789624	5	310,103,105,109,403,	0,2170,4164,4354,29682,
#Partially deleted in new
chr11	103062170	103092177	chr11:103062170-103092177	0	-	103089291	103091872	789624	8	244,103,105,109,92,71,92,494,	0,2104,4098,4288,20577,21085,27056,29513,
#Partially deleted in new
chr11	103062345	103091861	chr11:103062345-103091861	0	-	103089291	103091861	789624	7	69,103,105,109,71,92,178,	0,1929,3923,4113,20910,26881,29338,
#Partially deleted in new
chr11	103062380	103092154	chr11:103062380-103092154	0	-	103083319	103091872	789624	6	34,103,105,109,71,368,	0,1894,3888,4078,20875,29406,
#Partially deleted in new
chr11	103064274	103092148	chr11:103064274-103092148	0	-	103066561	103091872	789624	6	103,105,109,71,92,362,	0,1994,2184,18981,24952,27512,
#Partially deleted in new
chr11	103066458	103082839	chr11:103066458-103082839	0	-	103079960	103082839	789624	3	109,89,92,	0,13450,16289,
#Partially deleted in new
chr11	103066487	103092194	chr11:103066487-103092194	0	-	103083319	103091872	789624	4	80,92,71,408,	0,16260,16768,25299,
#Partially deleted in new
chr11	103089270	103092126	chr11:103089270-103092126	0	-	103089270	103089270	8553170	2	39,443,	0,2413,
#Partially deleted in new
chr11	103109409	103156102	chr11:103109409-103156102	1	+	103109574	103155507	8553170	25	360,171,136,119,145,233,135,114,112,125,176,196,96,153,99,140,247,128,116,128,150,206,156,115,772,	0,4127,4693,5767,7160,8221,11037,11279,11515,11962,13415,15690,19500,24145,24911,26085,26292,33858,38362,39080,42726,43893,45041,45285,45921,
#Partially deleted in new
chr11	103109430	103479863	chr11:103109430-103479863	1	+	103109574	103479253	0	89	339,171,136,119,145,233,135,114,112,125,176,196,96,153,99,140,229,128,116,128,150,206,156,115,171,383,133,118,113,120,151,206,183,183,224,116,200,265,208,130,156,260,247,152,145,103,168,131,249,109,114,143,85,155,138,114,161,124,122,87,127,142,110,99,124,164,120,135,144,90,66,51,78,132,73,161,126,111,156,76,209,105,117,210,90,110,82,117,769,	0,4106,4672,5746,7139,8200,11016,11258,11494,11941,13394,15669,19479,24124,24890,26064,26289,33837,38341,39059,42705,43872,45020,45264,45900,46957,49246,49479,51501,53597,56467,59324,60677,61455,63651,64624,66804,68125,69595,72326,75465,76811,77909,79066,80241,82086,82666,88502,89797,90615,94232,95391,100445,102358,106290,110484,111192,112599,113534,121829,124603,126241,126999,134262,135820,143854,145984,146675,148177,150457,170917,172748,173577,176824,178102,193662,195164,198290,202447,207114,211598,214455,248812,290232,326512,345755,346844,359158,369664,
#Partially deleted in new
chr11	103109513	103209910	chr11:103109513-103209910	0	+	103109574	103135917	8553170	51	256,171,136,119,145,233,135,114,112,125,176,196,96,153,99,82,128,116,128,150,206,359,171,383,133,118,113,120,151,206,183,183,224,116,200,265,208,130,156,260,247,152,145,103,147,131,249,109,114,143,35,	0,4023,4589,5663,7056,8117,10933,11175,11411,11858,13311,15586,19396,24041,24807,26353,33754,38258,38976,42622,43789,44937,45817,46874,49163,49396,51418,53514,56384,59241,60594,61372,63568,64541,66721,68042,69512,72243,75382,76728,77826,78983,80158,82003,82604,88419,89714,90532,94149,95308,100362,
#Partially deleted in new
chr11	103109521	103479421	chr11:103109521-103479421	1	+	103109574	103479253	0	20	248,171,136,119,145,233,135,114,112,125,176,196,96,153,99,90,110,82,117,327,	0,4015,4581,5655,7048,8109,10925,11167,11403,11850,13303,15578,19388,24033,24799,326421,345664,346753,359067,369573,
#Partially deleted in new
chr11	103109561	103479625	chr11:103109561-103479625	1	+	103109574	103479253	8553170	89	208,171,136,119,145,233,135,114,112,125,176,196,96,153,99,140,229,128,116,128,150,206,156,115,171,383,133,118,113,120,151,206,183,183,224,116,200,265,208,130,156,260,247,152,145,103,168,131,249,109,114,143,85,155,138,114,161,124,122,87,127,142,110,99,124,164,120,135,144,90,66,51,78,132,73,161,126,111,156,76,209,105,117,210,90,110,82,117,531,	0,3975,4541,5615,7008,8069,10885,11127,11363,11810,13263,15538,19348,23993,24759,25933,26158,33706,38210,38928,42574,43741,44889,45133,45769,46826,49115,49348,51370,53466,56336,59193,60546,61324,63520,64493,66673,67994,69464,72195,75334,76680,77778,78935,80110,81955,82535,88371,89666,90484,94101,95260,100314,102227,106159,110353,111061,112468,113403,121698,124472,126110,126868,134131,135689,143723,145853,146544,148046,150326,170786,172617,173446,176693,177971,193531,195033,198159,202316,206983,211467,214324,248681,290101,326381,345624,346713,359027,369533,
#Partially deleted in new
chr11	103109561	103479625	chr11:103109561-103479625	3	+	103109574	103479253	789624	90	208,171,136,119,145,233,135,114,112,125,176,196,96,153,99,140,229,128,116,128,150,206,156,115,171,383,133,118,113,120,151,206,183,183,224,116,200,265,208,130,156,260,247,152,145,103,168,131,249,109,114,143,85,155,138,114,161,124,122,87,127,142,110,21,99,124,164,120,135,144,90,66,51,78,132,73,161,126,111,156,76,209,105,117,210,90,110,82,117,531,	0,3975,4541,5615,7008,8069,10885,11127,11363,11810,13263,15538,19348,23993,24759,25933,26158,33706,38210,38928,42574,43741,44889,45133,45769,46826,49115,49348,51370,53466,56336,59193,60546,61324,63520,64493,66673,67994,69464,72195,75334,76680,77778,78935,80110,81955,82535,88371,89666,90484,94101,95260,100314,102227,106159,110353,111061,112468,113403,121698,124472,126110,126868,131965,134131,135689,143723,145853,146544,148046,150326,170786,172617,173446,176693,177971,193531,195033,198159,202316,206983,211467,214324,248681,290101,326381,345624,346713,359027,369533,
#Partially deleted in new
chr11	103109574	103479253	chr11:103109574-103479253	1	+	103109574	103479253	0	90	195,171,136,119,145,233,135,114,112,125,176,196,96,153,99,140,229,128,116,128,150,206,156,115,171,383,133,118,113,120,151,206,183,183,224,116,200,265,208,130,156,260,247,152,145,103,168,131,249,109,114,143,85,155,138,114,161,124,122,87,127,142,110,21,99,124,164,120,135,144,90,66,51,78,132,73,161,126,111,156,76,209,105,117,210,90,110,82,117,159,	0,3962,4528,5602,6995,8056,10872,11114,11350,11797,13250,15525,19335,23980,24746,25920,26145,33693,38197,38915,42561,43728,44876,45120,45756,46813,49102,49335,51357,53453,56323,59180,60533,61311,63507,64480,66660,67981,69451,72182,75321,76667,77765,78922,80097,81942,82522,88358,89653,90471,94088,95247,100301,102214,106146,110340,111048,112455,113390,121685,124459,126097,126855,131952,134118,135676,143710,145840,146531,148033,150313,170773,172604,173433,176680,177958,193518,195020,198146,202303,206970,211454,214311,248668,290088,326368,345611,346700,359014,369520,
#Partially deleted in new
chr11	103204910	103215891	chr11:103204910-103215891	0	+	103204910	103204910	8553170	4	54,85,155,171,	0,4965,6878,10810,
#Partially deleted in new
chr11	103282156	103287744	chr11:103282156-103287744	0	+	103282156	103282156	8553170	4	73,78,132,212,	0,851,4098,5376,
#Partially deleted in new
chr11	103283016	103479625	chr11:103283016-103479625	0	+	103283016	103323905	789624	17	69,132,73,161,126,111,156,76,213,105,117,210,90,110,82,117,531,	0,3238,4516,20076,21578,24704,28861,33528,38012,40869,75226,116646,152926,172169,173258,185572,196078,
#Partially deleted in new
chr11	103358242	103479345	chr11:103358242-103479345	0	+	103358242	103479253	789624	6	117,90,110,82,117,251,	0,77700,96943,98032,110346,120852,
#Deleted in new
chr11	103402012	103402586	chr11:103402012-103402586	7	-	103402012	103402012	16724991	1	574,	0,
#Deleted in new
chr11	103402587	103403422	chr11:103402587-103403422	7	-	103402587	103402587	16724991	1	835,	0,
#Deleted in new
chr11	103403511	103404167	chr11:103403511-103404167	7	-	103403511	103403511	16724991	1	656,	0,
#Deleted in new
chr11	103404308	103405834	chr11:103404308-103405834	7	-	103404308	103404308	16724991	1	1526,	0,
#Deleted in new
chr11	103406212	103407241	chr11:103406212-103407241	7	-	103406212	103406212	16724991	1	1029,	0,
#Deleted in new
chr11	103407440	103408376	chr11:103407440-103408376	7	-	103407440	103407440	16724991	1	936,	0,
#Deleted in new
chr11	103409579	103409657	chr11:103409579-103409657	7	-	103409579	103409579	16724991	1	78,	0,
#Partially deleted in new
chr11	103454998	103479437	chr11:103454998-103479437	0	+	103454998	103454998	8553170	4	297,82,117,343,	0,1276,13590,24096,
#Partially deleted in new
chr11	103468388	103479733	chr11:103468388-103479733	0	+	103468388	103468388	8553170	2	317,639,	0,10706,
#Partially deleted in new
chr11	103675993	103895271	chr11:103675993-103895271	3	-	103675993	103675993	8553170	5	181,109,145,79,48,	0,4240,28760,217881,219230,
#Partially deleted in new
chr11	103849905	103849980	chr11:103849905-103849980	3	+	103849905	103849905	5263520	1	75,	0,
#Partially deleted in new
chr11	103907185	104164107	chr11:103907185-104164107	1	-	103909693	104163927	789624	7	2634,215,199,63,181,205,304,	0,19726,36266,40476,88879,92865,256618,
#Partially deleted in new
chr11	103907188	104164379	chr11:103907188-104164379	3	-	103909693	104163927	789624	7	2631,215,199,63,181,187,576,	0,19723,36263,40473,88876,92862,256615,
#Partially deleted in new
chr11	103945547	103946546	chr11:103945547-103946546	3	+	103945547	103945547	8553170	2	450,97,	0,902,
#Partially deleted in new
chr11	103947683	104037026	chr11:103947683-104037026	0	-	103947683	104037026	789624	4	41,181,205,193,	0,48381,52367,89150,
#Deleted in new
chr11	104036579	104039188	chr11:104036579-104039188	3	+	104036822	104038013	0	1	2609,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	104252590	104252651	chr11:104252590-104252651	3	+	104252590	104252590	5263520	1	61,	0,
#Partially deleted in new
chr11	104568529	104609302	chr11:104568529-104609302	1	-	104568529	104568529	789624	4	392,84,41,66,	0,518,4027,40707,
#Deleted in new
chr11	104682382	104682581	chr11:104682382-104682581	7	-	104682382	104682382	16724991	1	199,	0,
#Deleted in new
chr11	104873263	104873417	chr11:104873263-104873417	7	+	104873263	104873263	16724991	1	154,	0,
#Partially deleted in new
chr11	104885717	104898670	chr11:104885717-104898670	3	-	104886713	104898414	789624	9	385,120,110,150,235,57,113,252,263,	0,975,1478,4656,5452,6613,6673,11499,12690,
#Partially deleted in new
chr11	104885717	104898433	chr11:104885717-104898433	1	-	104886713	104898414	8553170	8	385,120,110,150,235,173,252,26,	0,975,1478,4656,5452,6613,11499,12690,
#Partially deleted in new
chr11	104886689	104898670	chr11:104886689-104898670	1	-	104886713	104898414	789624	7	123,110,150,235,173,252,263,	0,506,3684,4480,5641,10527,11718,
#Partially deleted in new
chr11	104886689	104898670	chr11:104886689-104898670	0	-	104892350	104898414	789624	8	123,110,150,235,173,95,252,263,	0,506,3684,4480,5641,6207,10527,11718,
#Partially deleted in new
chr11	104886689	104898670	chr11:104886689-104898670	1	-	104886713	104898414	789624	4	123,150,173,263,	0,3684,5641,11718,
#Partially deleted in new
chr11	104886689	104898670	chr11:104886689-104898670	1	-	104886713	104898414	8553170	6	123,150,207,173,252,263,	0,3684,4508,5641,10527,11718,
#Partially deleted in new
chr11	104886689	104898670	chr11:104886689-104898670	1	-	104886795	104898414	8553170	6	123,150,235,173,252,263,	0,3684,4480,5641,10527,11718,
#Partially deleted in new
chr11	104886689	104898670	chr11:104886689-104898670	1	-	104887212	104898414	789624	5	123,110,150,173,263,	0,506,3684,5641,11718,
#Partially deleted in new
chr11	104886689	104898670	chr11:104886689-104898670	1	-	104887212	104898414	8553170	6	123,110,150,173,252,263,	0,506,3684,5641,10527,11718,
#Partially deleted in new
chr11	104886689	104898670	chr11:104886689-104898670	0	-	104892350	104898414	789624	7	123,110,150,173,95,252,263,	0,506,3684,5641,6207,10527,11718,
#Partially deleted in new
chr11	104886689	104898670	chr11:104886689-104898670	1	-	104886713	104898414	789624	5	123,150,173,252,263,	0,3684,5641,10527,11718,
#Partially deleted in new
chr11	104886713	104898414	chr11:104886713-104898414	1	-	104886713	104898414	789624	6	99,110,150,235,173,7,	0,482,3660,4456,5617,11694,
#Partially deleted in new
chr11	104901548	104918145	chr11:104901548-104918145	5	-	104901548	104901548	16724991	5	108,161,110,174,33,	0,1842,3899,7286,16564,
#Partially deleted in new
chr11	104901548	104918158	chr11:104901548-104918158	7	-	104901548	104901548	16724991	6	108,161,110,1169,174,46,	0,1842,3899,4901,7286,16564,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	104901548	104908705	chr11:104901548-104908705	5	-	104901548	104901548	16724991	3	111,161,3258,	0,1842,3899,
#Deleted in new
chr11	104901549	104903710	chr11:104901549-104903710	4	-	104901549	104901549	16724991	2	110,320,	0,1841,
#Partially deleted in new
chr11	104901552	104918175	chr11:104901552-104918175	4	-	104901552	104901552	16724991	5	107,161,110,174,63,	0,1838,3895,7282,16560,
#Partially deleted in new
chr11	104903452	104919073	chr11:104903452-104919073	5	-	104903452	104903452	16724991	4	99,110,174,143,	0,1995,5382,15478,
#Partially deleted in new
chr11	104903452	104909915	chr11:104903452-104909915	5	-	104903452	104903452	16724991	6	99,110,239,145,174,109,	0,1995,3524,4021,5382,6354,
#Partially deleted in new
chr11	104903516	104918141	chr11:104903516-104918141	4	-	104903516	104903516	16724991	5	35,110,157,174,29,	0,1931,3443,5318,14596,
#Partially deleted in new
chr11	104906557	104918147	chr11:104906557-104918147	4	-	104906557	104906557	16724991	3	559,174,35,	0,2277,11555,
#Partially deleted in new
chr11	104908687	104918143	chr11:104908687-104918143	4	-	104908687	104908687	16724991	2	321,31,	0,9425,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	104942865	104969436	chr11:104942865-104969436	3	-	104944752	104968525	789624	9	108,104,110,144,235,174,110,255,918,	0,1882,4217,5667,6677,8059,9030,11881,25653,
#Partially deleted in new
chr11	104942865	104948894	chr11:104942865-104948894	0	-	104942865	104942865	8553170	4	108,104,110,362,	0,1882,4217,5667,
#Partially deleted in new
chr11	104942867	104956698	chr11:104942867-104956698	1	-	104944752	104954840	789624	9	106,104,110,144,235,174,110,255,102,	0,1880,4215,5665,6675,8057,9028,11879,13729,
#Partially deleted in new
chr11	104942868	104947192	chr11:104942868-104947192	0	-	104942868	104947192	789624	2	105,110,	0,4214,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	104942869	104950992	chr11:104942869-104950992	0	-	104942869	104942869	8553170	3	1982,2695,68,	0,4213,8055,
#Partially deleted in new
chr11	104942872	104947358	chr11:104942872-104947358	0	-	104942872	104942872	8553170	3	101,104,276,	0,1875,4210,
#Partially deleted in new
chr11	104944752	104968547	chr11:104944752-104968547	0	-	104944752	104944752	8553170	8	99,110,144,235,174,168,255,29,	0,2330,3780,4790,6172,7143,9994,23766,
#Partially deleted in new
chr11	104946623	104948734	chr11:104946623-104948734	0	-	104946623	104946623	8553170	2	569,202,	0,1909,
#Partially deleted in new
chr11	104948601	104968565	chr11:104948601-104968565	0	-	104948601	104948601	8553170	4	75,235,255,47,	0,941,6145,19917,
#Partially deleted in new
chr11	104949401	104968581	chr11:104949401-104968581	0	-	104949401	104949401	8553170	5	376,174,110,255,63,	0,1523,2494,5345,19117,
#Partially deleted in new
chr11	104949660	104968639	chr11:104949660-104968639	0	-	104949660	104949660	8553170	4	117,174,255,121,	0,1264,5086,18858,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	104951027	104969366	chr11:104951027-104969366	0	-	104951027	104968525	789624	5	71,110,255,210,117,	0,868,3719,17491,18222,
#Partially deleted in new
chr11	104951396	104968575	chr11:104951396-104968575	0	-	104951396	104951396	8553170	3	609,255,57,	0,3350,17122,
#Deleted in new
chr11	104975355	104976116	chr11:104975355-104976116	7	-	104975355	104975355	16724991	2	235,103,	0,658,
#Partially deleted in new
chr11	104994239	105023168	chr11:104994239-105023168	1	-	104995743	105023136	789624	10	108,103,110,144,235,174,110,252,213,39,	0,1500,3143,4645,6021,7788,9034,12843,14567,28890,
#Partially deleted in new
chr11	104994239	105023168	chr11:104994239-105023168	1	-	104995743	105023136	789624	8	108,103,110,144,235,174,110,39,	0,1500,3143,4645,6021,7788,9034,28890,
#Partially deleted in new
chr11	104994242	105023136	chr11:104994242-105023136	3	-	104995743	105023136	789624	10	105,103,110,144,235,174,110,252,174,7,	0,1497,3140,4642,6018,7785,9031,12840,14564,28887,
#Partially deleted in new
chr11	104994276	105023167	chr11:104994276-105023167	1	-	104995743	105023136	789624	9	71,103,110,144,235,174,110,252,38,	0,1463,3106,4608,5984,7751,8997,12806,28853,
#Partially deleted in new
chr11	104995743	105023136	chr11:104995743-105023136	1	-	104995743	105023136	789624	9	99,110,144,235,174,110,252,213,7,	0,1639,3141,4517,6284,7530,11339,13063,27386,
#Partially deleted in new
chr11	104995743	105023136	chr11:104995743-105023136	1	-	104995743	105023136	789624	7	99,110,144,235,174,110,7,	0,1639,3141,4517,6284,7530,27386,
#Partially deleted in new
chr11	104995785	105023136	chr11:104995785-105023136	0	-	105002133	105023136	789624	7	57,110,144,235,174,252,7,	0,1597,3099,4475,6242,11297,27344,
#Partially deleted in new
chr11	105003273	105023143	chr11:105003273-105023143	0	-	105003273	105008939	789624	4	110,252,247,14,	0,3809,5533,19856,
#Partially deleted in new
chr11	105025442	105030503	chr11:105025442-105030503	0	-	105025552	105030503	789624	5	158,110,144,235,174,	0,1399,3681,4222,4887,
#Partially deleted in new
chr11	105025507	105035250	chr11:105025507-105035250	3	-	105026257	105035113	0	10	93,131,110,144,235,174,116,63,267,144,	0,718,1334,3616,4157,4822,5657,7556,8700,9599,
#Partially deleted in new
chr11	105025507	105035113	chr11:105025507-105035113	1	-	105026257	105035113	0	9	93,131,110,144,235,174,116,51,7,	0,718,1334,3616,4157,4822,5657,8916,9599,
#Partially deleted in new
chr11	105025507	105027172	chr11:105025507-105027172	0	-	105025507	105025507	8553170	2	93,331,	0,1334,
#Partially deleted in new
chr11	105025507	105035129	chr11:105025507-105035129	1	-	105026257	105034433	789624	9	93,131,110,144,235,174,116,495,23,	0,718,1334,3616,4157,4822,5657,8700,9599,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	105025507	105035149	chr11:105025507-105035149	1	-	105026257	105035113	0	9	849,110,144,235,174,116,63,267,43,	0,1334,3616,4157,4822,5657,7556,8700,9599,
#Partially deleted in new
chr11	105025520	105035157	chr11:105025520-105035157	1	-	105026257	105035113	0	5	80,131,110,51,51,	0,705,1321,8903,9586,
#Partially deleted in new
chr11	105025520	105035157	chr11:105025520-105035157	1	-	105026257	105035113	0	8	80,131,110,235,174,116,51,51,	0,705,1321,4144,4809,5644,8903,9586,
#Deleted in new
chr11	105026208	105035149	chr11:105026208-105035149	1	-	105026257	105035113	0	8	148,110,144,235,174,116,267,43,	0,633,2915,3456,4121,4956,7999,8898,
#Deleted in new
chr11	105026224	105035113	chr11:105026224-105035113	1	-	105026257	105035113	0	4	132,110,51,7,	0,617,8199,8882,
#Deleted in new
chr11	105026224	105035113	chr11:105026224-105035113	1	-	105026257	105035113	0	7	132,110,235,174,116,51,7,	0,617,3440,4105,4940,8199,8882,
#Deleted in new
chr11	105026420	105035147	chr11:105026420-105035147	0	-	105030444	105035113	789624	6	531,144,235,174,267,41,	0,2703,3244,3909,7787,8686,
#Deleted in new
chr11	105026545	105035147	chr11:105026545-105035147	1	-	105026976	105034364	789624	8	448,144,235,174,116,63,181,41,	0,2578,3119,3784,4619,6518,7662,8561,
#Deleted in new
chr11	105030441	105035139	chr11:105030441-105035139	0	-	105030441	105030441	8553170	4	839,63,267,33,	0,2622,3766,4665,
#Deleted in new
chr11	105030444	105034475	chr11:105030444-105034475	1	-	105030444	105034475	789624	2	59,268,	0,3763,
#Deleted in new
chr11	105030853	105034358	chr11:105030853-105034358	0	-	105030853	105030853	8553170	2	427,151,	0,3354,
#Deleted in new
chr11	105031122	105035143	chr11:105031122-105035143	0	-	105031122	105031122	8553170	4	158,63,267,37,	0,1941,3085,3984,
#Deleted in new
chr11	105041325	105045315	chr11:105041325-105045315	3	-	105041399	105045297	789624	3	394,267,25,	0,3066,3965,
#Deleted in new
chr11	105041522	105045376	chr11:105041522-105045376	1	-	105043525	105045297	789624	4	197,63,267,86,	0,1960,2869,3768,
#Partially deleted in new
chr11	105041570	105101431	chr11:105041570-105101431	1	-	105043525	105101414	789624	4	149,63,267,24,	0,1912,2821,59837,
#Deleted in new
chr11	105041658	105045307	chr11:105041658-105045307	0	-	105041658	105044617	789624	3	61,267,117,	0,2733,3532,
#Deleted in new
chr11	105043910	105045320	chr11:105043910-105045320	0	-	105043910	105043910	8553170	2	1021,30,	0,1380,
#Deleted in new
chr11	105063344	105071541	chr11:105063344-105071541	7	-	105063344	105063344	16724991	9	102,96,158,235,172,123,62,267,43,	0,572,2113,2666,3379,4204,6098,7259,8154,
#Deleted in new
chr11	105092468	105101431	chr11:105092468-105101431	3	-	105099362	105101414	789624	4	116,59,267,24,	0,6894,8044,8939,
#Deleted in new
chr11	105092468	105101431	chr11:105092468-105101431	0	-	105092468	105092468	8553170	4	116,59,267,24,	0,6894,8044,8939,
#Deleted in new
chr11	105092485	105101414	chr11:105092485-105101414	4	-	105092485	105092485	16724991	9	99,106,144,213,178,125,59,267,7,	0,570,2960,3496,4144,4984,6877,8027,8922,
#Deleted in new
chr11	105122660	105123339	chr11:105122660-105123339	7	-	105122660	105122660	16724991	2	96,116,	0,563,
#Deleted in new
chr11	105137720	105139726	chr11:105137720-105139726	3	-	105138812	105139726	0	3	378,267,7,	0,1091,1999,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	105137720	105516002	chr11:105137720-105516002	1	-	105138812	105138968	8553170	8	378,267,109,92,44,49,215,521,	0,1091,18388,22544,121921,130542,320518,377761,
#Deleted in new
chr11	105137942	105139282	chr11:105137942-105139282	1	-	105138812	105138968	789624	2	156,471,	0,869,
#Deleted in new
chr11	105138027	105139593	chr11:105138027-105139593	1	-	105138812	105138968	789624	3	71,267,84,	0,784,1482,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	105157926	105531697	chr11:105157926-105531697	0	-	105157926	105157926	8553170	5	164,92,44,49,96,	0,2338,101715,110336,373675,
#Deleted in new
chr11	105194439	105194946	chr11:105194439-105194946	7	-	105194439	105194439	16724991	1	507,	0,
#Deleted in new
chr11	105246879	105247060	chr11:105246879-105247060	7	-	105246879	105246879	16724991	1	181,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	105352669	105352956	chr11:105352669-105352956	3	-	105352669	105352669	8553170	1	287,	0,
#Deleted in new
chr11	105609993	105612434	chr11:105609993-105612434	0	+	105610997	105612434	789624	3	30,178,159,	0,914,2282,
#Partially deleted in new
chr11	105610028	105913110	chr11:105610028-105913110	1	+	105610997	105911908	789624	11	400,178,159,240,185,54,159,168,105,111,1235,	0,879,2247,142952,251995,277490,288240,293785,295168,300406,301847,
#Deleted in new
chr11	105610061	105612434	chr11:105610061-105612434	0	+	105610997	105612434	789624	3	367,148,159,	0,876,2214,
#Partially deleted in new
chr11	105610072	105982092	chr11:105610072-105982092	3	+	105610997	105979739	789624	17	356,178,159,240,185,54,159,168,105,111,207,371,199,248,115,135,2518,	0,835,2203,142908,251951,277446,288196,293741,295124,300362,308639,314326,316668,323649,361841,364237,369502,
#Partially deleted in new
chr11	105610072	105982092	chr11:105610072-105982092	1	+	105610997	105974555	789624	17	356,178,159,240,185,54,159,168,105,111,207,371,199,248,115,248,2518,	0,835,2203,142908,251951,277446,288196,293741,295124,300362,308639,314326,316668,323649,355874,364237,369502,
#Deleted in new
chr11	105610120	105614436	chr11:105610120-105614436	1	+	105610997	105612442	789624	3	308,178,2161,	0,787,2155,
#Deleted in new
chr11	105610265	105612434	chr11:105610265-105612434	0	+	105610997	105612434	789624	3	163,148,159,	0,672,2010,
#Partially deleted in new
chr11	105610671	105862649	chr11:105610671-105862649	0	+	105610671	105610671	8553170	4	414,159,240,626,	0,1604,142309,251352,
#Partially deleted in new
chr11	105610723	105913110	chr11:105610723-105913110	1	+	105610997	105911908	789624	10	362,159,240,185,54,159,168,105,111,1235,	0,1552,142257,251300,276795,287545,293090,294473,299711,301152,
#Partially deleted in new
chr11	105610906	105797913	chr11:105610906-105797913	0	+	105610997	105797913	789624	4	179,159,240,188,	0,1369,142074,186819,
#Partially deleted in new
chr11	105610997	105979739	chr11:105610997-105979739	1	+	105610997	105974555	789624	16	88,159,240,185,54,159,168,105,111,207,371,199,248,115,248,165,	0,1278,141983,251026,276521,287271,292816,294199,299437,307714,313401,315743,322724,354949,363312,368577,
#Partially deleted in new
chr11	105610997	105982089	chr11:105610997-105982089	1	+	105610997	105979739	789624	16	88,159,240,185,54,159,168,105,111,207,371,199,248,115,135,2515,	0,1278,141983,251026,276521,287271,292816,294199,299437,307714,313401,315743,322724,360916,363312,368577,
#Deleted in new
chr11	105706298	105707937	chr11:105706298-105707937	7	+	105706298	105706298	16724991	1	1639,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	105824633	105824770	chr11:105824633-105824770	3	+	105824633	105824633	8553170	1	137,	0,
#Partially deleted in new
chr11	105842782	105903983	chr11:105842782-105903983	0	+	105842782	105842782	8553170	5	130,185,54,159,170,	0,19241,44736,55486,61031,
#Partially deleted in new
chr11	105933807	105974430	chr11:105933807-105974430	0	+	105933807	105971949	789624	4	162,115,115,121,	0,32139,38106,40502,
#Partially deleted in new
chr11	105933941	105980261	chr11:105933941-105980261	0	+	105933941	105933941	8553170	5	28,39,115,248,687,	0,11521,32005,40368,45633,
#Deleted in new
chr11	105974825	105974931	chr11:105974825-105974931	3	-	105974825	105974825	8553170	1	106,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	105995184	105999213	chr11:105995184-105999213	3	+	105995184	105995184	8553170	2	2895,875,	0,3154,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	105995622	106009748	chr11:105995622-106009748	0	-	105995622	105995622	8553170	3	427,415,166,	0,580,13960,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	106007901	106022227	chr11:106007901-106022227	3	-	106009534	106010917	789624	3	2209,612,1266,	0,2554,13060,
#Deleted in new
chr11	106009728	106010585	chr11:106009728-106010585	1	-	106009829	106010583	789624	4	167,213,99,29,	0,169,727,828,
#Partially deleted in new
chr11	106009983	106022403	chr11:106009983-106022403	0	-	106009983	106010917	789624	3	127,612,209,	0,472,12211,
#Partially deleted in new
chr11	106010584	106022250	chr11:106010584-106022250	0	-	106010584	106010917	789624	2	483,129,	0,11537,
#Partially deleted in new
chr11	106010702	106022250	chr11:106010702-106022250	0	-	106010702	106010917	789624	2	365,415,	0,11133,
#Partially deleted in new
chr11	106051097	106077459	chr11:106051097-106077459	3	-	106052849	106059097	789624	3	3358,245,148,	0,7767,26214,
#Partially deleted in new
chr11	106051097	106077349	chr11:106051097-106077349	1	-	106052849	106054451	789624	2	3358,38,	0,26214,
#Partially deleted in new
chr11	106052673	106077765	chr11:106052673-106077765	1	-	106052849	106059097	789624	4	1782,245,201,454,	0,6191,23833,24638,
#Partially deleted in new
chr11	106054352	106076700	chr11:106054352-106076700	0	-	106054352	106054451	789624	2	103,194,	0,22154,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	106057425	106059111	chr11:106057425-106059111	1	-	106058009	106059097	789624	2	627,247,	0,1439,
#Partially deleted in new
chr11	106058738	106076639	chr11:106058738-106076639	0	-	106058738	106058738	8553170	2	371,133,	0,17768,
#Partially deleted in new
chr11	106075500	106091459	chr11:106075500-106091459	0	+	106079478	106091459	789624	4	76,226,122,144,	0,3966,15056,15815,
#Deleted in new
chr11	106076003	106077348	chr11:106076003-106077348	0	-	106076003	106076003	8553170	2	704,37,	0,1308,
#Partially deleted in new
chr11	106076241	106094654	chr11:106076241-106094654	0	+	106079478	106094654	789624	5	47,226,122,162,72,	0,3225,14315,15074,18341,
#Partially deleted in new
chr11	106077488	106098710	chr11:106077488-106098710	3	+	106077710	106096907	0	6	405,226,122,162,72,1968,	0,1978,13068,13827,17094,19254,
#Partially deleted in new
chr11	106077657	106097298	chr11:106077657-106097298	0	+	106077710	106091323	0	5	236,226,162,72,556,	0,1809,13658,16925,19085,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	106085989	106101922	chr11:106085989-106101922	1	-	106085989	106085989	8553170	5	383,32,72,68,271,	0,3536,8579,9794,15662,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	106091466	106098699	chr11:106091466-106098699	0	+	106091466	106091466	8553170	2	3188,1957,	0,5276,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	106096546	106101975	chr11:106096546-106101975	3	-	106096546	106096546	8553170	2	368,324,	0,5105,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	106112458	106132116	chr11:106112458-106132116	3	-	106112458	106112458	789624	3	165,193,51,	0,7255,19607,
#Partially deleted in new
chr11	106250018	106263232	chr11:106250018-106263232	5	+	106250018	106250018	16724991	6	249,65,664,168,86,527,	0,2772,4132,7038,10332,12687,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	106251406	106264905	chr11:106251406-106264905	7	+	106251406	106251406	16724991	5	105,65,97,83,1404,	0,1384,3311,8947,12095,
#Deleted in new
chr11	106264314	106264581	chr11:106264314-106264581	5	+	106264314	106264314	16724991	1	267,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	106310044	106311791	chr11:106310044-106311791	7	+	106310044	106310044	16724991	2	214,1255,	0,492,
#Partially deleted in new
chr11	106674011	107018524	chr11:106674011-107018524	3	-	106687548	107018055	789624	8	13745,155,144,486,719,122,62,772,	0,34500,102427,135981,265448,304607,312058,343741,
#Partially deleted in new
chr11	106687183	107018445	chr11:106687183-107018445	1	-	106687548	107018055	789624	9	573,155,93,144,486,719,122,62,693,	0,21328,59367,89255,122809,252276,291435,298886,330569,
#Partially deleted in new
chr11	106687374	107018151	chr11:106687374-107018151	1	-	106687548	107018055	789624	9	382,155,144,486,63,719,122,62,399,	0,21137,89064,122618,249275,252085,291244,298695,330378,
#Deleted in new
chr11	106824024	106824954	chr11:106824024-106824954	7	+	106824024	106824024	16724991	2	159,150,	0,780,
#Deleted in new
chr11	106826391	106827890	chr11:106826391-106827890	7	-	106826391	106826391	16724991	1	1499,	0,
#Deleted in new
chr11	107176285	107177530	chr11:107176285-107177530	7	+	107176285	107176285	16724991	1	1245,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	107312131	107316271	chr11:107312131-107316271	3	-	107312131	107312131	8553170	1	4140,	0,
#Partially deleted in new
chr11	107326344	107457844	chr11:107326344-107457844	3	-	107326909	107457816	789624	18	709,102,81,156,117,213,138,117,90,94,653,116,94,120,111,123,111,133,	0,3573,8536,10213,22592,27179,63729,66434,89864,91849,102454,107289,112745,115158,116594,128105,129321,131367,
#Partially deleted in new
chr11	107326359	107443031	chr11:107326359-107443031	0	-	107345463	107443031	789624	16	694,102,81,156,77,117,213,138,117,90,94,653,116,94,120,93,	0,3558,8521,10198,19054,22577,27164,63714,66419,89849,91834,102439,107274,112730,115143,116579,
#Partially deleted in new
chr11	107326796	107443031	chr11:107326796-107443031	0	-	107353531	107443031	789624	15	257,102,81,156,117,155,138,117,90,94,653,116,94,120,93,	0,3121,8084,9761,22140,26727,63277,65982,89412,91397,102002,106837,112293,114706,116142,
#Partially deleted in new
chr11	107348710	107353730	chr11:107348710-107353730	0	-	107348710	107348710	8553170	2	343,207,	0,4813,
#Deleted in new
chr11	107403403	107404589	chr11:107403403-107404589	7	-	107403403	107403403	16724991	1	1186,	0,
#Partially deleted in new
chr11	107502725	107565746	chr11:107502725-107565746	3	-	107504657	107560893	0	12	2490,150,257,152,107,71,105,96,132,238,135,146,	0,8161,19573,22715,29574,47027,49082,50382,51121,54040,58039,62875,
#Partially deleted in new
chr11	107503028	107565735	chr11:107503028-107565735	1	-	107504508	107560893	0	7	1512,48,96,132,238,135,135,	0,48836,50079,50818,53737,57736,62572,
#Partially deleted in new
chr11	107504594	107565518	chr11:107504594-107565518	1	-	107504657	107560893	0	15	621,150,257,152,107,71,105,96,132,238,135,118,190,53,66,	0,6292,17704,20846,27705,45158,47213,48513,49252,52171,56170,58104,58952,60567,60858,
#Partially deleted in new
chr11	107504597	107565701	chr11:107504597-107565701	0	-	107532389	107560893	0	9	618,152,107,105,96,132,238,135,101,	0,20843,27702,47210,48510,49249,52168,56167,61003,
#Partially deleted in new
chr11	107504657	107565742	chr11:107504657-107565742	1	-	107504657	107565632	0	12	558,150,257,152,107,71,105,96,132,238,135,113,	0,6229,17641,20783,27642,45095,47150,48450,49189,52108,56107,60972,
#Partially deleted in new
chr11	107532313	107565734	chr11:107532313-107565734	0	-	107553905	107560893	789624	8	93,71,105,96,127,238,135,134,	0,17439,19494,20794,21533,24452,28451,33287,
#Partially deleted in new
chr11	107553856	107565733	chr11:107553856-107565733	0	-	107553856	107553856	8553170	4	117,238,135,104,	0,2909,6908,11773,
#Deleted in new
chr11	107585900	107586903	chr11:107585900-107586903	7	-	107585900	107585900	16724991	1	1003,	0,
#Partially deleted in new
chr11	107591090	107665484	chr11:107591090-107665484	1	+	107630417	107665197	789624	13	319,102,136,146,29,98,130,134,69,24,51,134,460,	0,27014,34306,39326,39609,40489,44545,56377,59244,59794,63081,64842,73934,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	107591229	107666779	chr11:107591229-107666779	3	+	107618189	107665197	789624	12	180,102,146,29,98,130,134,69,24,51,134,1755,	0,26875,39187,39470,40350,44406,56238,59105,59655,62942,64703,73795,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	107591248	107665960	chr11:107591248-107665960	1	+	107618189	107665197	789624	11	161,102,146,29,98,130,134,69,51,134,936,	0,26856,39168,39451,40331,44387,56219,59086,62923,64684,73776,
#Partially deleted in new
chr11	107591405	107623864	chr11:107591405-107623864	0	+	107591405	107591405	8553170	3	4,102,586,	0,26699,31873,
#Deleted in new
chr11	107591744	107593223	chr11:107591744-107593223	0	+	107591744	107591744	5263520	3	257,181,534,	0,576,945,
#Partially deleted in new
chr11	107591897	107620470	chr11:107591897-107620470	0	+	107591897	107591897	8553170	3	104,102,435,	0,26207,28138,
#Deleted in new
chr11	107600378	107600868	chr11:107600378-107600868	7	-	107600378	107600378	16724991	1	490,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	107642886	107643871	chr11:107642886-107643871	7	-	107642886	107642886	16724991	2	149,511,	0,474,
#Partially deleted in new
chr11	107653435	107655993	chr11:107653435-107655993	0	+	107653435	107653435	8553170	2	787,61,	0,2497,
#Partially deleted in new
chr11	107707377	107719693	chr11:107707377-107719693	3	-	107707834	107707930	0	3	628,200,78,	0,4585,12238,
#Partially deleted in new
chr11	107707382	107712061	chr11:107707382-107712061	1	-	107707834	107707930	0	2	623,99,	0,4580,
#Partially deleted in new
chr11	107707611	107719657	chr11:107707611-107719657	1	-	107707834	107707930	0	2	394,42,	0,12004,
#Partially deleted in new
chr11	107736008	107738718	chr11:107736008-107738718	7	-	107736008	107736008	16724991	2	944,655,	0,2055,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	107790990	107928293	chr11:107790990-107928293	1	-	107792658	107858767	789624	11	1803,155,53,157,160,128,176,297,161,114,127,	0,12010,13727,14368,15726,20676,24799,67667,68695,117450,137176,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	107790990	107859188	chr11:107790990-107859188	3	-	107792614	107858767	789624	8	1810,155,53,157,160,128,176,531,	0,12010,13727,14368,15726,20676,24799,67667,
#Partially deleted in new
chr11	107792597	107858808	chr11:107792597-107858808	0	-	107811787	107858767	789624	7	203,155,53,157,160,128,151,	0,10403,12120,12761,14119,19069,66060,
#Partially deleted in new
chr11	107792614	107858561	chr11:107792614-107858561	1	-	107792614	107815934	789624	8	186,155,53,157,160,128,176,61,	0,10386,12103,12744,14102,19052,23175,65886,
#Partially deleted in new
chr11	107792658	107858767	chr11:107792658-107858767	0	-	107803088	107858767	789624	7	142,155,157,160,128,176,110,	0,10342,12700,14058,19008,23131,65999,
#Partially deleted in new
chr11	107806844	107858799	chr11:107806844-107858799	0	-	107840749	107858767	789624	5	32,128,176,84,142,	0,4822,8945,33822,51813,
#Deleted in new
chr11	107908419	107908764	chr11:107908419-107908764	7	+	107908419	107908419	16724991	1	345,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	107928502	107963482	chr11:107928502-107963482	3	+	107928568	107962372	789624	2	293,1537,	0,33443,
#Partially deleted in new
chr11	108008732	108107776	chr11:108008732-108107776	3	+	108009348	108104384	0	19	640,110,100,177,142,146,81,94,131,108,65,133,132,124,176,162,119,124,3587,	0,25069,37537,41157,43927,45914,46142,61363,63599,64657,69443,79794,80759,85658,86079,86797,88903,89673,95457,
#Partially deleted in new
chr11	108008919	108054955	chr11:108008919-108054955	0	+	108009348	108049899	789624	6	453,110,177,142,146,81,	0,24882,40970,43740,45727,45955,
#Partially deleted in new
chr11	108008955	108046493	chr11:108008955-108046493	0	+	108008955	108008955	8553170	3	417,110,224,	0,24846,37314,
#Partially deleted in new
chr11	108009259	108106852	chr11:108009259-108106852	0	+	108009348	108104384	0	20	113,110,100,177,142,146,81,94,131,108,65,133,132,124,176,162,119,124,713,646,	0,24542,37010,40630,43400,45387,45615,60836,63072,64130,68916,79267,80232,85131,85552,86270,88376,89146,94930,96947,
#Partially deleted in new
chr11	108046269	108054792	chr11:108046269-108054792	0	+	108046269	108054792	789624	3	100,142,146,	0,6390,8377,
#Deleted in new
chr11	108073389	108074066	chr11:108073389-108074066	0	+	108073389	108073389	8553170	2	108,267,	0,410,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	108084912	108085014	chr11:108084912-108085014	3	+	108084912	108084912	8553170	1	102,	0,
#Partially deleted in new
chr11	108105073	108121684	chr11:108105073-108121684	3	-	108105073	108105073	8553170	4	353,98,124,389,	0,1627,5197,16222,
#Partially deleted in new
chr11	108121515	108147776	chr11:108121515-108147776	3	+	108121606	108147390	0	12	163,48,118,96,101,144,151,96,114,65,158,507,	0,10391,12304,12705,13626,17382,18549,20089,20921,22467,24686,25754,
#Partially deleted in new
chr11	108121566	108136939	chr11:108121566-108136939	1	+	108121606	108136123	0	6	112,48,118,96,101,870,	0,10340,12253,12654,13575,14503,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	108121566	108134448	chr11:108121566-108134448	0	+	108121566	108121566	8553170	4	112,48,118,228,	0,10340,12253,12654,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	108121583	108143946	chr11:108121583-108143946	0	+	108121606	108138989	789624	8	95,48,118,96,144,151,96,1510,	0,10323,12236,12637,17314,18481,20021,20853,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	108121750	108134244	chr11:108121750-108134244	0	+	108121750	108121750	8553170	6	143,94,99,48,118,24,	0,6135,7352,10156,12069,12470,
#Partially deleted in new
chr11	108121795	108135241	chr11:108121795-108135241	0	+	108134252	108135241	789624	5	131,48,118,96,100,	0,10111,12024,12425,13346,
#Partially deleted in new
chr11	108121804	108131954	chr11:108121804-108131954	0	+	108121804	108121804	8553170	3	122,559,48,	0,6838,10102,
#Partially deleted in new
chr11	108133893	108139164	chr11:108133893-108139164	0	+	108133893	108139065	789624	4	44,96,101,267,	0,327,1248,5004,
#Partially deleted in new
chr11	108138719	108140171	chr11:108138719-108140171	0	+	108138719	108138719	8553170	2	322,107,	0,1345,
#Partially deleted in new
chr11	108138967	108144221	chr11:108138967-108144221	0	+	108138967	108138967	8553170	5	74,151,96,114,239,	0,1097,2637,3469,5015,
#Partially deleted in new
chr11	108140024	108144147	chr11:108140024-108144147	0	+	108140024	108140024	8553170	4	191,96,114,165,	0,1580,2412,3958,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	108142457	108150381	chr11:108142457-108150381	3	-	108142457	108142457	8553170	2	212,534,	0,7390,
#Partially deleted in new
chr11	108146120	108147588	chr11:108146120-108147588	0	+	108146120	108146120	8553170	2	239,319,	0,1149,
#Partially deleted in new
chr11	108157214	108222642	chr11:108157214-108222642	3	-	108158941	108222536	789624	18	1805,1135,61,109,116,1653,129,97,88,92,88,82,225,41,73,61,119,143,	0,3665,4905,12529,12713,14984,19031,19779,28017,28188,29267,30883,31891,33245,34903,36742,40087,65285,
#Partially deleted in new
chr11	108158637	108161683	chr11:108158637-108161683	0	-	108158637	108158637	8553170	2	382,363,	0,2683,
#Partially deleted in new
chr11	108158792	108170201	chr11:108158792-108170201	0	-	108158792	108158792	8553170	5	227,1135,61,109,274,	0,2087,3327,10951,11135,
#Deleted in new
chr11	108161183	108162165	chr11:108161183-108162165	0	-	108161183	108162165	789624	2	852,46,	0,936,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	108171131	108222636	chr11:108171131-108222636	0	-	108171131	108171131	8553170	13	2720,129,97,88,92,88,82,232,41,73,61,119,137,	0,5114,5862,14100,14271,15350,16966,17974,19328,20986,22825,26170,51368,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	108190459	108222616	chr11:108190459-108222616	0	-	108208438	108222536	789624	6	41,73,61,119,164,117,	0,1658,3497,6842,17961,32040,
#Partially deleted in new
chr11	108222483	108287714	chr11:108222483-108287714	0	+	108227624	108287714	789624	27	703,102,113,146,165,166,239,164,170,372,195,96,226,126,126,90,172,200,83,156,76,131,118,174,170,247,115,	0,5111,5292,6694,13186,21469,22304,24480,26449,28217,29353,30333,31330,33731,34997,36502,44687,45926,48580,48767,50048,50238,57007,58511,60226,61743,65116,
#Boundary problem: need 63, got 0, diff 63, mapped 0.0
chr11	108222831	108369099	chr11:108222831-108369099	3	+	108227624	108365508	0	63	355,102,113,146,165,166,239,164,170,372,195,96,226,126,126,90,172,200,83,156,76,131,118,174,170,247,116,127,200,175,165,133,96,172,142,177,178,88,156,88,89,103,149,105,120,235,168,114,218,208,114,159,139,83,141,117,150,166,87,115,64,137,3775,	0,4763,4944,6346,12838,21121,21956,24132,26101,27869,29005,29985,30982,33383,34649,36154,44339,45578,48232,48419,49700,49890,56659,58163,59878,61395,64768,66145,66770,69787,70481,72095,74455,76882,78816,80021,81843,85065,87328,89579,92991,93179,94541,97122,98469,102478,103226,104813,106189,107382,108612,109047,109930,111054,112137,113013,120390,122911,124447,130934,131979,142250,142493,
#Partially deleted in new
chr11	108223084	108244084	chr11:108223084-108244084	0	+	108227624	108244084	789624	5	102,102,113,146,132,	0,4510,4691,6093,20868,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	108223102	108236534	chr11:108223102-108236534	1	+	108227624	108235845	789624	4	4594,113,146,865,	0,4673,6075,12567,
#Boundary problem: need 64, got 0, diff 64, mapped 0.0
chr11	108223115	108369102	chr11:108223115-108369102	1	+	108227624	108365508	0	64	71,88,102,113,146,165,166,239,164,170,372,195,96,226,126,126,90,172,200,83,156,76,131,118,174,170,247,116,127,200,175,165,133,96,172,142,177,178,88,156,88,89,103,149,105,120,235,168,114,218,208,114,159,139,83,141,117,150,166,87,115,64,137,3778,	0,1668,4479,4660,6062,12554,20837,21672,23848,25817,27585,28721,29701,30698,33099,34365,35870,44055,45294,47948,48135,49416,49606,56375,57879,59594,61111,64484,65861,66486,69503,70197,71811,74171,76598,78532,79737,81559,84781,87044,89295,92707,92895,94257,96838,98185,102194,102942,104529,105905,107098,108328,108763,109646,110770,111853,112729,120106,122627,124163,130650,131695,141966,142209,
#Partially deleted in new
chr11	108223171	108229362	chr11:108223171-108229362	1	+	108227624	108229331	789624	6	15,88,84,102,113,185,	0,1612,2992,4423,4604,6006,
#Partially deleted in new
chr11	108223173	108229363	chr11:108223173-108229363	1	+	108227624	108229331	789624	5	13,88,98,113,186,	0,1610,4425,4602,6004,
#Partially deleted in new
chr11	108223528	108229364	chr11:108223528-108229364	1	+	108227624	108229331	789624	4	158,102,113,187,	0,4066,4247,5649,
#Partially deleted in new
chr11	108224077	108235743	chr11:108224077-108235743	0	+	108227624	108235743	789624	6	59,88,102,113,146,74,	0,706,3517,3698,5100,11592,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	108224782	108231594	chr11:108224782-108231594	0	+	108227624	108229331	789624	5	89,102,113,1735,107,	0,2812,2993,4395,6705,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	108229502	108229604	chr11:108229502-108229604	3	-	108229502	108229502	8553170	1	102,	0,
#Deleted in new
chr11	108252820	108253996	chr11:108252820-108253996	0	+	108252820	108252820	8553170	2	92,166,	0,1010,
#Deleted in new
chr11	108252820	108253996	chr11:108252820-108253996	0	+	108252820	108252820	8553170	2	92,142,	0,1034,
#Partially deleted in new
chr11	108268409	108271352	chr11:108268409-108271352	0	+	108268409	108268409	8553170	2	200,102,	0,2841,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	108287177	108290667	chr11:108287177-108290667	0	+	108287177	108287177	8553170	3	538,127,1066,	0,1799,2424,
#Boundary problem: need 37, got 0, diff 37, mapped 0.0
chr11	108287391	108366034	chr11:108287391-108366034	0	+	108287391	108287391	8553170	37	324,127,200,175,165,133,96,172,142,177,178,88,156,88,89,103,149,105,120,235,168,114,218,208,114,159,139,83,141,117,150,166,87,115,64,137,710,	0,1585,2210,5227,5921,7535,9895,12322,14256,15461,17283,20505,22768,25019,28431,28619,29981,32562,33909,37918,38666,40253,41629,42822,44052,44487,45370,46494,47577,48453,55830,58351,59887,66374,67419,77690,77933,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	108287599	108295996	chr11:108287599-108295996	0	+	108287599	108294951	789624	4	116,127,200,1070,	0,1377,2002,7327,
#Partially deleted in new
chr11	108293384	108295370	chr11:108293384-108295370	0	+	108293384	108293384	8553170	2	93,444,	0,1542,
#Partially deleted in new
chr11	108296973	108333908	chr11:108296973-108333908	0	+	108296973	108296973	8553170	22	409,172,142,177,178,88,156,88,89,103,149,105,120,235,168,114,218,208,114,159,139,23,	0,2740,4674,5879,7701,10923,13186,15437,18849,19037,20399,22980,24327,28336,29084,30671,32047,33240,34470,34905,35788,36912,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	108299479	108303029	chr11:108299479-108303029	0	+	108299479	108299479	8553170	3	406,142,177,	0,2168,3373,
#Partially deleted in new
chr11	108303021	108315894	chr11:108303021-108315894	0	+	108303021	108310206	789624	5	8,178,156,88,72,	0,1653,7138,9389,12801,
#Partially deleted in new
chr11	108307991	108317467	chr11:108307991-108317467	0	+	108307991	108307991	8553170	6	79,156,88,89,103,95,	0,2168,4419,7831,8019,9381,
#Partially deleted in new
chr11	108308518	108467531	chr11:108308518-108467531	1	-	108308970	108461559	789624	7	553,56,171,131,201,90,61,	0,77401,84689,96910,98244,152960,158952,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	108327393	108329238	chr11:108327393-108329238	0	+	108327393	108327393	8553170	2	365,218,	0,1627,
#Partially deleted in new
chr11	108327644	108329307	chr11:108327644-108329307	0	+	108327644	108327644	8553170	2	114,287,	0,1376,
#Partially deleted in new
chr11	108331198	108462641	chr11:108331198-108462641	0	-	108383020	108461559	789624	12	369,73,1195,156,56,171,131,201,54,93,90,94,	0,4021,23716,51821,54721,62009,74230,75564,75897,100547,130280,131349,
#Partially deleted in new
chr11	108331200	108467501	chr11:108331200-108467501	3	-	108383020	108461559	789624	13	367,73,1195,156,56,171,131,201,54,93,90,93,31,	0,4019,23714,51819,54719,62007,74228,75562,75895,100545,130278,131347,136270,
#Partially deleted in new
chr11	108331410	108405483	chr11:108331410-108405483	0	-	108331549	108405483	789624	4	157,73,171,55,	0,3809,61797,74018,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	108332761	108336408	chr11:108332761-108336408	0	+	108332761	108332761	8553170	5	139,83,141,117,225,	0,1124,2207,3083,3422,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	108332776	108336153	chr11:108332776-108336153	0	+	108332776	108332776	8553170	4	124,83,141,309,	0,1109,2192,3068,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	108340158	108405528	chr11:108340158-108405528	0	-	108340158	108340158	8553170	3	206,171,100,	0,53049,65270,
#Partially deleted in new
chr11	108346520	108365729	chr11:108346520-108365729	0	+	108346520	108346520	8553170	6	72,87,115,64,137,405,	0,758,7245,8290,18561,18804,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	108353755	108365738	chr11:108353755-108365738	0	+	108353755	108353755	8553170	4	125,64,137,414,	0,1055,11326,11569,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	108365897	108368750	chr11:108365897-108368750	0	+	108365897	108365897	8553170	2	668,472,	0,2381,
#Partially deleted in new
chr11	108382999	108467531	chr11:108382999-108467531	1	-	108383020	108461559	789624	9	176,56,171,131,201,54,93,90,61,	0,2920,10208,22429,23763,24096,48746,78479,84471,
#Partially deleted in new
chr11	108382999	108461569	chr11:108382999-108461569	1	-	108383020	108461559	789624	8	176,56,171,131,201,54,93,91,	0,2920,10208,22429,23763,24096,48746,78479,
#Partially deleted in new
chr11	108393312	108461569	chr11:108393312-108461569	0	-	108393312	108461559	789624	5	66,131,201,93,91,	0,12116,13450,38433,68166,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	108472104	108498432	chr11:108472104-108498432	3	-	108474826	108498366	789624	8	2848,105,195,197,217,284,198,268,	0,5502,7196,9075,9901,14052,18865,26060,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	108472111	108491504	chr11:108472111-108491504	1	-	108474826	108491201	789624	7	2841,105,195,197,217,284,535,	0,5495,7189,9068,9894,14045,18858,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	108473074	108491217	chr11:108473074-108491217	0	-	108478035	108491201	789624	8	1878,105,117,195,197,217,284,248,	0,4532,4949,6226,8105,8931,13082,17895,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	108474549	108486237	chr11:108474549-108486237	0	-	108474549	108474549	8553170	3	403,105,81,	0,3057,11607,
#Partially deleted in new
chr11	108474739	108482058	chr11:108474739-108482058	0	-	108474826	108482058	789624	4	213,105,197,53,	0,2867,6440,7266,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	108482160	108486964	chr11:108482160-108486964	0	-	108482160	108482160	8553170	3	62,284,227,	0,3996,4577,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	108505430	108593647	chr11:108505430-108593647	3	-	108509536	108593536	789624	6	9445,139,49,163,161,230,	0,12804,22705,33593,36221,87987,
#Partially deleted in new
chr11	108508948	108593738	chr11:108508948-108593738	1	-	108509536	108593733	789624	7	5927,139,49,163,161,87,16,	0,9286,19187,30075,32703,84469,84774,
#Partially deleted in new
chr11	108510078	108552205	chr11:108510078-108552205	0	-	108510078	108541703	789624	6	4797,139,49,163,161,186,	0,8156,18057,28945,31573,41941,
#Partially deleted in new
chr11	108511366	108538207	chr11:108511366-108538207	0	-	108511366	108518301	789624	3	3509,139,245,	0,6868,26596,
#Partially deleted in new
chr11	108513406	108538187	chr11:108513406-108538187	0	-	108513406	108528159	789624	4	1469,139,49,225,	0,4828,14729,24556,
#Partially deleted in new
chr11	108528162	108568126	chr11:108528162-108568126	0	-	108528162	108541703	789624	4	22,163,161,209,	0,10861,13489,39755,
#Partially deleted in new
chr11	108665024	108940930	chr11:108665024-108940930	3	+	108665153	108940423	0	18	315,61,131,159,121,190,127,163,85,99,88,89,466,120,162,57,146,685,	0,8442,10571,12060,13290,14346,23911,26851,28491,41714,50854,54772,57972,173421,176290,187128,252848,275221,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr11	108665068	108940918	chr11:108665068-108940918	0	+	108665153	108731612	8553170	20	271,61,131,159,121,190,127,163,85,99,88,89,466,142,50,120,162,57,146,673,	0,8398,10527,12016,13246,14302,23867,26807,28447,41670,50810,54728,57928,66469,81177,173377,176246,187084,252804,275177,
#Partially deleted in new
chr11	108665081	108675794	chr11:108665081-108675794	0	+	108665081	108665081	8553170	3	258,61,199,	0,8385,10514,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr11	108665121	108922243	chr11:108665121-108922243	1	+	108665153	108918076	789624	17	218,61,131,159,121,190,127,163,85,99,88,89,466,120,162,57,4371,	0,8345,10474,11963,13193,14249,23814,26754,28394,41617,50757,54675,57875,173324,176193,187031,252751,
#Deleted in new
chr11	108690288	108690956	chr11:108690288-108690956	7	-	108690288	108690288	16724991	1	668,	0,
#Partially deleted in new
chr11	108727740	108730104	chr11:108727740-108730104	7	-	108727740	108727740	16724991	2	61,259,	0,2105,
#Deleted in new
chr11	108822332	108822650	chr11:108822332-108822650	7	-	108822332	108822332	16724991	1	318,	0,
#Deleted in new
chr11	108838355	108841476	chr11:108838355-108841476	0	+	108838355	108838355	8553170	2	210,162,	0,2959,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	108860574	108917924	chr11:108860574-108917924	0	+	108860574	108860574	8553170	2	383,52,	0,57298,
#Partially deleted in new
chr11	108868247	108940808	chr11:108868247-108940808	0	+	108868247	108868247	8553170	3	85,146,563,	0,49625,71998,
#Partially deleted in new
chr11	108929518	108940925	chr11:108929518-108940925	0	+	108929518	108929518	8553170	2	190,680,	0,10727,
#Deleted in new
chr11	108957717	108959796	chr11:108957717-108959796	7	+	108957717	108957717	16724991	3	1466,69,541,	0,1468,1538,
#Deleted in new
chr11	108957717	108959797	chr11:108957717-108959797	0	+	108957717	108957717	8553170	1	2080,	0,
#Partially deleted in new
chr11	109002464	109037967	chr11:109002464-109037967	3	-	109002464	109002464	8553170	2	108,225,	0,35278,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	109005516	109005623	chr11:109005516-109005623	3	+	109005516	109005516	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	109120877	109120986	chr11:109120877-109120986	7	-	109120877	109120877	16724991	1	109,	0,
#Deleted in new
chr11	109263493	109263564	chr11:109263493-109263564	3	-	109263493	109263493	8553170	1	71,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	109355084	109583907	chr11:109355084-109583907	3	-	109355084	109355084	8553170	5	50,63,147,117,163,	0,9921,157494,228442,228660,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	109413253	109583643	chr11:109413253-109583643	1	-	109413253	109413253	8553170	4	303,248,135,117,	0,2670,99337,170273,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	109422119	109429114	chr11:109422119-109429114	3	+	109423633	109424227	789624	2	144,5740,	0,1255,
#Deleted in new
chr11	109486967	109487424	chr11:109486967-109487424	7	-	109486967	109486967	16724991	1	457,	0,
#Deleted in new
chr11	109637467	109638128	chr11:109637467-109638128	7	-	109637467	109637467	16724991	1	661,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	109751441	109823847	chr11:109751441-109823847	3	-	109751441	109751441	8553170	5	78,55,94,165,228,	0,29540,36178,71481,72178,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr11	109864294	110296612	chr11:109864294-110296612	0	-	110175216	110279692	789624	19	425,34,212,295,268,243,93,161,131,164,97,147,84,275,96,84,76,208,146,	0,126461,259764,267141,310672,368942,371804,373197,383408,389651,390994,393472,393811,399665,400484,408241,415386,422705,432172,
#Partially deleted in new
chr11	109907003	109907741	chr11:109907003-109907741	7	-	109907003	109907003	16724991	1	738,	0,
#Deleted in new
chr11	109982191	109983043	chr11:109982191-109983043	7	+	109982191	109982191	16724991	1	852,	0,
#Deleted in new
chr11	109985242	109985660	chr11:109985242-109985660	7	-	109985242	109985242	16724991	1	418,	0,
#Deleted in new
chr11	110049527	110050160	chr11:110049527-110050160	7	+	110049527	110049527	16724991	1	633,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	110093360	110171841	chr11:110093360-110171841	1	+	110093411	110165737	789624	6	72,752,140,235,107,7501,	0,43302,59558,65895,69912,70980,
#Partially deleted in new
chr11	110131003	110165934	chr11:110131003-110165934	3	+	110131082	110165737	789624	6	103,752,140,235,107,1594,	0,5659,21915,28252,32269,33337,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	110135853	110171839	chr11:110135853-110171839	1	+	110136734	110165737	789624	5	1561,140,235,107,7499,	0,17065,23402,27419,28487,
#Partially deleted in new
chr11	110174879	110296712	chr11:110174879-110296712	1	-	110199611	110279692	789624	16	355,98,161,243,93,161,131,164,97,147,84,275,96,84,76,246,	0,24701,56993,58357,61219,62612,72823,79066,80409,82887,83226,89080,89899,97656,104801,121587,
#Partially deleted in new
chr11	110174879	110296712	chr11:110174879-110296712	0	-	110199611	110279692	789624	17	355,47,98,161,243,93,161,131,164,97,147,84,275,96,84,76,246,	0,6912,24701,56993,58357,61219,62612,72823,79066,80409,82887,83226,89080,89899,97656,104801,121587,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	110185072	110233466	chr11:110185072-110233466	0	-	110199611	110233466	789624	4	547,98,161,230,	0,14508,46800,48164,
#Partially deleted in new
chr11	110195560	110296712	chr11:110195560-110296712	1	-	110199611	110279692	789624	16	605,98,161,243,93,161,131,164,97,147,84,275,96,84,76,246,	0,4020,36312,37676,40538,41931,52142,58385,59728,62206,62545,68399,69218,76975,84120,100906,
#Partially deleted in new
chr11	110195560	110296712	chr11:110195560-110296712	1	-	110199611	110247751	789624	9	605,98,161,243,93,161,131,76,246,	0,4020,36312,37676,40538,41931,52142,84120,100906,
#Partially deleted in new
chr11	110195560	110296712	chr11:110195560-110296712	1	-	110199611	110279692	789624	8	605,98,132,33,275,84,76,246,	0,4020,36312,62596,68399,76975,84120,100906,
#Partially deleted in new
chr11	110195560	110296614	chr11:110195560-110296614	1	-	110199611	110279692	789624	16	605,98,161,243,93,161,131,164,97,147,84,275,96,84,76,148,	0,4020,36312,37676,40538,41931,52142,58385,59728,62206,62545,68399,69218,76975,84120,100906,
#Partially deleted in new
chr11	110195589	110296504	chr11:110195589-110296504	0	-	110200361	110279692	789624	17	576,98,109,161,243,93,161,131,164,97,147,84,275,96,84,76,38,	0,3991,4688,36283,37647,40509,41902,52113,58356,59699,62177,62516,68370,69189,76946,84091,100877,
#Partially deleted in new
chr11	110229440	110296722	chr11:110229440-110296722	3	-	110231868	110279692	789624	14	2593,243,93,161,131,164,97,147,84,275,96,84,76,256,	0,3796,6658,8051,18262,24505,25848,28326,28665,34519,35338,43095,50240,67026,
#Partially deleted in new
chr11	110229442	110296712	chr11:110229442-110296712	1	-	110231868	110272594	789624	12	2591,243,93,161,131,164,97,147,84,84,76,246,	0,3794,6656,8049,18260,24503,25846,28324,28663,43093,50238,67024,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	110229446	110236671	chr11:110229446-110236671	0	-	110229446	110229446	8553170	3	2587,243,573,	0,3790,6652,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	110229449	110237857	chr11:110229449-110237857	0	-	110229449	110229449	8553170	4	2584,243,93,366,	0,3787,6649,8042,
#Partially deleted in new
chr11	110229449	110296614	chr11:110229449-110296614	1	-	110231868	110279692	789624	14	2584,243,93,161,131,164,97,147,84,275,96,84,76,148,	0,3787,6649,8042,18253,24496,25839,28317,28656,34510,35329,43086,50231,67017,
#Partially deleted in new
chr11	110231549	110233523	chr11:110231549-110233523	0	-	110231549	110231549	8553170	2	484,287,	0,1687,
#Partially deleted in new
chr11	110231550	110296614	chr11:110231550-110296614	0	-	110258126	110279692	789624	12	483,243,93,161,131,164,97,147,84,84,76,148,	0,1686,4548,5941,16152,22395,23738,26216,26555,40985,48130,64916,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	110231837	110237886	chr11:110231837-110237886	0	-	110231837	110231837	8553170	5	196,243,93,161,100,	0,1399,4261,5654,5949,
#Partially deleted in new
chr11	110253944	110258208	chr11:110253944-110258208	0	-	110253944	110253944	8553170	4	165,97,147,103,	0,1344,3822,4161,
#Partially deleted in new
chr11	110255305	110296612	chr11:110255305-110296612	0	-	110257766	110258113	789624	6	80,147,84,61,44,146,	0,2461,2800,8654,24407,41161,
#Partially deleted in new
chr11	110258113	110264824	chr11:110258113-110264824	0	-	110263410	110264824	789624	4	76,104,275,46,	0,5218,5846,6665,
#Partially deleted in new
chr11	110258178	110288391	chr11:110258178-110288391	0	-	110258178	110272598	789624	5	11,275,96,84,70,	0,5781,6600,14357,30143,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	110263959	110296597	chr11:110263959-110296597	0	-	110272910	110279692	789624	6	275,96,84,141,76,131,	0,819,8576,8951,15721,32507,
#Partially deleted in new
chr11	110264044	110296640	chr11:110264044-110296640	0	-	110264044	110272598	789624	4	190,96,84,174,	0,734,8491,32422,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	110264778	110296618	chr11:110264778-110296618	0	-	110272910	110279692	789624	5	96,84,123,76,152,	0,7757,8132,14902,31688,
#Partially deleted in new
chr11	110355198	110381986	chr11:110355198-110381986	0	+	110355198	110355198	789624	3	320,174,61,	0,11162,26727,
#Duplicated in new
chr11	110429882	110464881	chr11:110429882-110464881	3	+	110430120	110462468	0	4	423,125,130,2528,	0,5951,27035,32471,
#Partially deleted in new
chr11	110577041	110712728	chr11:110577041-110712728	1	-	110579369	110712231	0	16	4184,115,190,110,162,179,189,67,78,85,42,150,165,83,297,93,	0,5279,6506,9174,13606,14935,29519,31942,34267,37519,38511,47120,53586,113505,135085,135594,
#Partially deleted in new
chr11	110577042	110589685	chr11:110577042-110589685	1	-	110577139	110586259	789624	6	110,1834,115,190,110,264,	0,2349,5278,6505,9173,12379,
#Partially deleted in new
chr11	110577053	110712050	chr11:110577053-110712050	1	-	110579369	110711693	0	15	4172,115,190,110,162,179,189,67,78,85,42,150,165,83,393,	0,5267,6494,9162,13594,14923,29507,31930,34255,37507,38499,47108,53574,113493,134604,
#Partially deleted in new
chr11	110577053	110713189	chr11:110577053-110713189	3	-	110579369	110690626	0	15	4172,115,190,110,162,179,189,67,78,85,42,150,165,83,211,	0,5267,6494,9162,13594,14923,29507,31930,34255,37507,38499,47108,53574,113493,135925,
#Partially deleted in new
chr11	110577053	110712728	chr11:110577053-110712728	1	-	110579369	110690626	0	15	4172,115,190,110,162,179,189,67,78,85,42,150,165,83,93,	0,5267,6494,9162,13594,14923,29507,31930,34255,37507,38499,47108,53574,113493,135582,
#Partially deleted in new
chr11	110577053	110713189	chr11:110577053-110713189	1	-	110579369	110690998	0	16	4172,115,190,110,162,179,189,67,78,85,42,150,165,83,68,211,	0,5267,6494,9162,13594,14923,29507,31930,34255,37507,38499,47108,53574,113493,113918,135925,
#Deleted in new
chr11	110788025	110788976	chr11:110788025-110788976	7	-	110788025	110788025	16724991	1	951,	0,
#Deleted in new
chr11	110876993	110877177	chr11:110876993-110877177	7	-	110876993	110876993	16724991	1	184,	0,
#Deleted in new
chr11	111040097	111040208	chr11:111040097-111040208	7	-	111040097	111040097	16724991	1	111,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	111089869	111090368	chr11:111089869-111090368	3	-	111089869	111089869	8553170	1	499,	0,
#Partially deleted in new
chr11	111092044	111179641	chr11:111092044-111179641	3	-	111092044	111092044	8553170	4	267,262,108,467,	0,78218,79110,87130,
#Partially deleted in new
chr11	111105546	111105895	chr11:111105546-111105895	7	-	111105546	111105546	16724991	1	349,	0,
#Partially deleted in new
chr11	111107059	111107750	chr11:111107059-111107750	7	-	111107059	111107059	16724991	1	691,	0,
#Partially deleted in new
chr11	111245804	111285726	chr11:111245804-111285726	0	+	111245853	111284288	789624	4	59,110,302,74,	0,10178,38271,39848,
#Partially deleted in new
chr11	111245853	111286401	chr11:111245853-111286401	3	+	111245853	111286054	789624	5	10,104,43,302,749,	0,10135,35544,38222,39799,
#Partially deleted in new
chr11	111255981	111286245	chr11:111255981-111286245	1	+	111281433	111286054	789624	4	111,43,302,593,	0,25416,28094,29671,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	111290786	111305045	chr11:111290786-111305045	3	-	111290786	111290786	8553170	2	7880,218,	0,14041,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	111293388	111300232	chr11:111293388-111300232	0	-	111293388	111293388	8553170	2	5278,88,	0,6756,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	111293388	111299253	chr11:111293388-111299253	0	-	111293388	111293388	8553170	2	5278,259,	0,5606,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	111293445	111299814	chr11:111293445-111299814	0	-	111293445	111293445	8553170	2	5221,221,	0,6148,
#Deleted in new
chr11	111298342	111300009	chr11:111298342-111300009	0	-	111298342	111298342	8553170	2	324,67,	0,1600,
#Partially deleted in new
chr11	111298554	111308629	chr11:111298554-111308629	3	+	111298581	111308437	789624	5	34,95,55,230,561,	0,1972,6373,7839,9514,
#Partially deleted in new
chr11	111298554	111308629	chr11:111298554-111308629	1	+	111298581	111308437	789624	6	34,105,95,55,230,561,	0,1231,1972,6373,7839,9514,
#Partially deleted in new
chr11	111298554	111308629	chr11:111298554-111308629	0	+	111298581	111306406	789624	6	34,232,95,55,230,561,	0,1231,1972,6373,7839,9514,
#Partially deleted in new
chr11	111298839	111308292	chr11:111298839-111308292	0	+	111306527	111308292	789624	5	219,95,55,230,224,	0,1687,6088,7554,9229,
#Partially deleted in new
chr11	111298839	111308733	chr11:111298839-111308733	1	+	111306527	111308437	789624	5	219,95,55,230,665,	0,1687,6088,7554,9229,
#Partially deleted in new
chr11	111299250	111308628	chr11:111299250-111308628	1	+	111306527	111308437	789624	5	474,95,55,230,560,	0,1276,5677,7143,8818,
#Partially deleted in new
chr11	111299732	111308735	chr11:111299732-111308735	1	+	111306527	111308437	789624	5	285,95,55,230,667,	0,794,5195,6661,8336,
#Deleted in new
chr11	111347756	111347824	chr11:111347756-111347824	3	+	111347756	111347756	5263520	1	68,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	111352251	111379692	chr11:111352251-111379692	3	-	111354260	111379177	0	5	2324,266,43,131,531,	0,5193,5543,6536,26910,
#Partially deleted in new
chr11	111354536	111359406	chr11:111354536-111359406	0	-	111354536	111354536	8553170	5	39,266,43,131,135,	0,2908,3258,4251,4735,
#Partially deleted in new
chr11	111357525	111449981	chr11:111357525-111449981	0	-	111357525	111404642	789624	5	185,43,131,102,63,	0,269,1262,47095,92393,
#Partially deleted in new
chr11	111358807	111379275	chr11:111358807-111379275	0	-	111358807	111358807	8553170	3	111,79,114,	0,18966,20354,
#Partially deleted in new
chr11	111358816	111364277	chr11:111358816-111364277	0	-	111358816	111358816	8553170	2	102,445,	0,5016,
#Partially deleted in new
chr11	111362970	111379275	chr11:111362970-111379275	0	-	111362970	111362970	8553170	2	464,114,	0,16191,
#Deleted in new
chr11	111363330	111364298	chr11:111363330-111364298	0	-	111363330	111363330	8553170	2	104,466,	0,502,
#Deleted in new
chr11	111383091	111383219	chr11:111383091-111383219	3	+	111383091	111383091	8553170	1	128,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	111384736	111435044	chr11:111384736-111435044	0	-	111384736	111384736	8553170	6	1394,39,193,192,102,53,	0,1517,12114,12843,19884,50255,
#Partially deleted in new
chr11	111396797	111399151	chr11:111396797-111399151	0	-	111396797	111396797	8553170	3	246,127,54,	0,782,2300,
#Partially deleted in new
chr11	111396797	111401041	chr11:111396797-111401041	0	-	111396797	111396797	8553170	4	246,301,145,57,	0,782,2300,4187,
#Partially deleted in new
chr11	111396797	111398045	chr11:111396797-111398045	0	-	111396797	111396797	8553170	2	246,466,	0,782,
#Partially deleted in new
chr11	111404639	111455630	chr11:111404639-111455630	0	-	111404639	111404639	8553170	2	83,412,	0,50579,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	111414241	111418186	chr11:111414241-111418186	3	-	111414241	111414241	789624	4	499,144,122,1822,	0,596,1677,2123,
#Partially deleted in new
chr11	111448449	111473381	chr11:111448449-111473381	7	+	111448449	111448449	16724991	29	218,161,184,106,96,184,163,180,175,122,126,236,122,225,335,381,171,158,141,118,173,126,181,123,152,87,147,198,81,	0,883,1263,1890,2302,2501,2797,3959,4959,5786,6513,6935,7307,8065,8614,9395,11172,11762,13443,13866,14383,14595,14859,16103,18288,19107,20748,21337,24851,
#Deleted in new
chr11	111449867	111451311	chr11:111449867-111451311	4	+	111449867	111449867	16724991	5	29,106,149,172,65,	0,472,768,1095,1379,
#Partially deleted in new
chr11	111451338	111456605	chr11:111451338-111456605	4	+	111451338	111451338	16724991	6	71,175,122,126,122,91,	0,2070,2897,3624,4418,5176,
#Deleted in new
chr11	111454984	111458151	chr11:111454984-111458151	4	+	111454984	111454984	16724991	3	104,158,307,	0,2079,2860,
#Partially deleted in new
chr11	111464588	111475397	chr11:111464588-111475397	5	+	111464588	111464588	16724991	7	87,152,87,145,198,123,299,	0,2149,2968,4611,5198,8712,10510,
#Partially deleted in new
chr11	111467525	111512354	chr11:111467525-111512354	3	-	111467671	111498776	789624	6	156,152,199,138,199,174,	0,27637,29685,30472,31078,44655,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	111496511	111512339	chr11:111496511-111512339	1	-	111497099	111498776	789624	4	898,138,199,159,	0,1486,2092,15669,
#Partially deleted in new
chr11	111497238	111512342	chr11:111497238-111512342	0	-	111497238	111498776	789624	5	171,138,199,84,162,	0,759,1365,10596,14942,
#Deleted in new
chr11	111512937	111513021	chr11:111512937-111513021	3	+	111512937	111512937	5263520	1	84,	0,
#Deleted in new
chr11	111513438	111513515	chr11:111513438-111513515	3	+	111513438	111513438	5263520	1	77,	0,
#Partially deleted in new
chr11	111514042	111526755	chr11:111514042-111526755	3	-	111514042	111514042	8553170	2	1051,104,	0,12609,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	111514784	111537031	chr11:111514784-111537031	3	+	111514784	111536827	789624	7	226,42,71,81,60,53,262,	0,726,1255,10098,18961,19627,21985,
#Partially deleted in new
chr11	111514784	111537029	chr11:111514784-111537029	1	+	111514784	111536827	789624	6	226,42,71,60,53,260,	0,726,1255,18961,19627,21985,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	111514784	111537030	chr11:111514784-111537030	1	+	111514784	111534468	789624	6	226,42,71,81,60,2619,	0,726,1255,10098,18961,19627,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	111516041	111537031	chr11:111516041-111537031	0	+	111516041	111519029	789624	5	69,180,60,53,262,	0,2967,17704,18370,20728,
#Partially deleted in new
chr11	111540279	111555212	chr11:111540279-111555212	0	+	111549666	111555212	789624	5	55,298,158,33,6,	0,3643,9338,14281,14927,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	111540507	111561063	chr11:111540507-111561063	3	+	111540843	111560458	789624	7	421,298,158,33,84,103,969,	0,3415,9110,14053,14699,17033,19587,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	111540507	111561745	chr11:111540507-111561745	1	+	111544114	111560458	789624	6	421,298,33,84,103,1651,	0,3415,14053,14699,17033,19587,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	111540658	111560960	chr11:111540658-111560960	1	+	111540843	111560458	789624	8	270,24,298,158,33,84,103,866,	0,903,3264,8959,13902,14548,16882,19436,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	111540708	111560933	chr11:111540708-111560933	1	+	111540843	111560118	789624	8	220,24,298,158,33,84,107,839,	0,853,3214,8909,13852,14498,16832,19386,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	111540719	111561539	chr11:111540719-111561539	0	+	111540843	111554582	789624	6	209,298,33,84,103,1445,	0,3203,13841,14487,16821,19375,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	111540729	111560918	chr11:111540729-111560918	1	+	111540843	111560118	789624	7	199,298,158,33,84,107,824,	0,3193,8888,13831,14477,16811,19365,
#Partially deleted in new
chr11	111541332	111557641	chr11:111541332-111557641	0	+	111549666	111557641	789624	6	253,298,158,33,84,101,	0,2590,8285,13228,13874,16208,
#Partially deleted in new
chr11	111541439	111557643	chr11:111541439-111557643	0	+	111544114	111557643	789624	5	146,298,33,84,103,	0,2483,13121,13767,16101,
#Partially deleted in new
chr11	111541551	111551416	chr11:111541551-111551416	0	+	111541551	111541551	8553170	4	34,298,158,84,	0,2371,8066,9781,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr11	111602390	111730853	chr11:111602390-111730853	3	+	111602563	111724129	789624	15	308,117,64,162,125,124,221,153,165,229,285,164,111,92,7358,	0,13852,17948,85610,98495,99061,100812,102596,109820,117384,118087,118508,119439,120274,121105,
#Deleted in new
chr11	111670955	111672404	chr11:111670955-111672404	7	-	111670955	111670955	16724991	1	1449,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	111683110	111683424	chr11:111683110-111683424	3	+	111683110	111683110	8553170	1	314,	0,
#Deleted in new
chr11	111718741	111720674	chr11:111718741-111720674	0	+	111718741	111718741	8553170	3	118,229,197,	0,1033,1736,
#Partially deleted in new
chr11	111726907	111766382	chr11:111726907-111766382	3	-	111726964	111766361	789624	16	150,122,92,143,155,61,174,135,71,115,156,148,233,101,91,135,	0,10540,15145,15615,16468,21046,25251,26535,27591,28072,28387,32896,33911,37897,38386,39340,
#Partially deleted in new
chr11	111726913	111766386	chr11:111726913-111766386	1	-	111726964	111766361	789624	14	144,122,92,143,155,61,174,135,71,115,156,148,233,139,	0,10534,15139,15609,16462,21040,25245,26529,27585,28066,28381,32890,33905,39334,
#Partially deleted in new
chr11	111726969	111735323	chr11:111726969-111735323	0	-	111726969	111726969	8553170	2	88,43,	0,8311,
#Deleted in new
chr11	111735280	111737503	chr11:111735280-111737503	0	-	111735280	111735280	8553170	2	45,56,	0,2167,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr11	111737880	111766427	chr11:111737880-111766427	1	-	111741595	111766361	789624	15	3732,92,143,155,61,174,135,71,115,156,148,233,101,91,180,	0,4172,4642,5495,10073,14278,15562,16618,17099,17414,21923,22938,26924,27413,28367,
#Partially deleted in new
chr11	111741054	111766368	chr11:111741054-111766368	0	-	111761189	111766361	789624	15	558,92,143,155,61,174,135,71,115,156,148,173,101,91,121,	0,998,1468,2321,6899,11104,12388,13444,13925,14240,18749,20064,23750,24239,25193,
#Partially deleted in new
chr11	111741320	111766368	chr11:111741320-111766368	1	-	111741595	111766361	789624	14	292,92,143,155,61,174,71,115,156,148,233,101,91,121,	0,732,1202,2055,6633,10838,13178,13659,13974,18483,19498,23484,23973,24927,
#Partially deleted in new
chr11	111741516	111766382	chr11:111741516-111766382	1	-	111741595	111766361	789624	13	96,92,143,155,61,174,135,71,115,156,101,91,135,	0,536,1006,1859,6437,10642,11926,12982,13463,13778,23288,23777,24731,
#Partially deleted in new
chr11	111741547	111747994	chr11:111741547-111747994	0	-	111741547	111741547	8553170	4	65,613,155,41,	0,505,1828,6406,
#Partially deleted in new
chr11	111742056	111755038	chr11:111742056-111755038	0	-	111742056	111755038	789624	6	88,143,174,135,71,59,	0,466,10102,11386,12442,12923,
#Partially deleted in new
chr11	111759813	111766367	chr11:111759813-111766367	0	-	111761004	111766361	789624	4	138,233,91,120,	0,1005,5480,6434,
#Partially deleted in new
chr11	111760955	111766062	chr11:111760955-111766062	0	-	111760955	111765866	789624	4	96,101,91,265,	0,3849,4338,4842,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	111768667	111778306	chr11:111768667-111778306	3	-	111768667	111768667	8553170	4	472,94,86,131,	0,691,2639,9508,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	111782194	111838305	chr11:111782194-111838305	0	-	111786056	111838305	789624	6	3900,119,131,130,148,57,	0,4207,27448,53970,55273,56054,
#Partially deleted in new
chr11	111786151	111814721	chr11:111786151-111814721	0	-	111786151	111786151	8553170	3	369,131,121,	0,23491,28449,
#Partially deleted in new
chr11	111786255	111871533	chr11:111786255-111871533	1	-	111786396	111871482	789624	15	265,131,130,148,130,155,123,106,88,136,89,71,135,139,182,	0,23387,49909,51212,51993,54399,58345,67124,67393,71346,74291,78925,82346,83976,85096,
#Partially deleted in new
chr11	111786275	111836715	chr11:111786275-111836715	0	-	111786275	111786275	8553170	4	245,131,130,36,	0,23367,49889,50404,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr11	111786280	111871560	chr11:111786280-111871560	0	-	111865208	111871482	789624	15	240,129,131,130,148,130,155,123,106,88,136,89,71,135,209,	0,2160,23362,49884,51187,51968,54374,58320,67099,67368,71321,74266,78900,82321,85071,
#Partially deleted in new
chr11	111786283	111871301	chr11:111786283-111871301	1	-	111786396	111860598	789624	15	237,131,130,148,130,155,123,106,88,136,89,71,135,139,527,	0,23359,49881,51184,51965,54371,58317,67096,67365,71318,74263,78897,82318,83948,84491,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	111786283	111809709	chr11:111786283-111809709	0	-	111805275	111809709	789624	3	237,222,67,	0,18810,23359,
#Partially deleted in new
chr11	111786283	111870865	chr11:111786283-111870865	1	-	111786396	111860598	789624	15	237,131,130,148,151,155,123,106,88,136,89,71,135,139,91,	0,23359,49881,51184,51965,54371,58317,67096,67365,71318,74263,78897,82318,83948,84491,
#Partially deleted in new
chr11	111786283	111871581	chr11:111786283-111871581	3	-	111786396	111871482	789624	15	237,131,130,148,151,155,123,106,88,136,89,71,135,139,230,	0,23359,49881,51184,51965,54371,58317,67096,67365,71318,74263,78897,82318,83948,85068,
#Partially deleted in new
chr11	111786285	111809690	chr11:111786285-111809690	0	-	111798170	111809690	789624	3	235,102,48,	0,11808,23357,
#Partially deleted in new
chr11	111786285	111879425	chr11:111786285-111879425	3	-	111786396	111879132	789624	19	235,131,130,148,130,155,123,106,88,136,89,71,135,139,138,159,204,157,465,	0,23357,49879,51182,51963,54369,58315,67094,67363,71316,74261,78895,82316,83946,85066,90195,90522,92270,92675,
#Partially deleted in new
chr11	111809618	111868736	chr11:111809618-111868736	0	-	111809618	111809618	8553170	6	155,106,136,89,71,135,	0,43761,47983,50928,55562,58983,
#Partially deleted in new
chr11	111817213	111829212	chr11:111817213-111829212	3	-	111817213	111817213	8553170	2	326,358,	0,11641,
#Partially deleted in new
chr11	111837538	111871546	chr11:111837538-111871546	0	-	111857724	111871482	789624	11	77,130,155,123,106,88,136,89,135,139,195,	0,710,3116,7062,15841,16110,20063,23008,31063,32693,33813,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	111837542	111845391	chr11:111837542-111845391	0	-	111837542	111837542	8553170	5	73,130,155,123,213,	0,706,3112,7058,7636,
#Partially deleted in new
chr11	111840765	111857944	chr11:111840765-111857944	0	-	111840765	111840765	8553170	5	44,123,106,88,343,	0,3835,12614,12883,16836,
#Partially deleted in new
chr11	111849463	111871543	chr11:111849463-111871543	0	-	111853704	111871482	789624	8	327,106,88,89,71,135,139,192,	0,3916,4185,11083,15717,19138,20768,21888,
#Partially deleted in new
chr11	111857601	111871581	chr11:111857601-111871581	0	-	111868605	111871482	789624	6	136,89,71,135,143,230,	0,2945,7579,11000,12626,13750,
#Deleted in new
chr11	111864253	111864460	chr11:111864253-111864460	7	+	111864253	111864253	16724991	1	207,	0,
#Partially deleted in new
chr11	111865180	111876567	chr11:111865180-111876567	0	-	111865180	111876567	789624	4	71,135,139,87,	0,3421,5051,11300,
#Partially deleted in new
chr11	111868633	111871283	chr11:111868633-111871283	0	-	111868633	111868633	8553170	3	103,143,343,	0,1594,2307,
#Partially deleted in new
chr11	111870294	111876844	chr11:111870294-111876844	0	-	111871451	111876844	789624	5	76,138,407,159,37,	0,1057,5403,6186,6513,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	111874055	111879180	chr11:111874055-111879180	3	-	111874921	111879132	789624	5	2049,159,204,157,220,	0,2425,2752,4500,4905,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	111874758	111879457	chr11:111874758-111879457	0	-	111876865	111879132	789624	4	1346,159,204,497,	0,1722,2049,4202,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	111875341	111881243	chr11:111875341-111881243	0	-	111875341	111880820	789624	4	763,159,204,485,	0,1139,1466,5417,
#Partially deleted in new
chr11	111878934	111883900	chr11:111878934-111883900	1	+	111882460	111883880	789624	4	106,231,67,130,	0,3433,4201,4836,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	111879223	111885975	chr11:111879223-111885975	3	+	111879560	111883880	789624	4	382,231,67,2205,	0,3144,3912,4547,
#Partially deleted in new
chr11	111879541	111884074	chr11:111879541-111884074	1	+	111879560	111883860	789624	3	64,231,304,	0,2826,4229,
#Partially deleted in new
chr11	111879560	111883805	chr11:111879560-111883805	0	+	111881522	111883805	789624	5	45,131,231,67,35,	0,1924,2807,3575,4210,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	111880775	111884069	chr11:111880775-111884069	1	+	111881450	111883880	789624	4	840,231,67,299,	0,1592,2360,2995,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	111889198	111889474	chr11:111889198-111889474	7	-	111889198	111889198	16724991	1	276,	0,
#Partially deleted in new
chr11	111908564	111912014	chr11:111908564-111912014	1	-	111908763	111911724	0	3	403,123,491,	0,1762,2959,
#Deleted in new
chr11	111908618	111909267	chr11:111908618-111909267	0	-	111908763	111909267	789624	2	349,115,	0,534,
#Partially deleted in new
chr11	111908619	111910893	chr11:111908619-111910893	1	-	111908763	111910449	789624	2	348,567,	0,1707,
#Partially deleted in new
chr11	111908619	111910744	chr11:111908619-111910744	1	-	111908763	111910449	789624	3	348,123,74,	0,1707,2051,
#Partially deleted in new
chr11	111908621	111913213	chr11:111908621-111913213	1	-	111908763	111911724	0	4	346,123,399,109,	0,1705,2902,4483,
#Partially deleted in new
chr11	111908622	111923722	chr11:111908622-111923722	3	-	111908763	111911724	0	4	345,123,399,20,	0,1704,2901,15080,
#Partially deleted in new
chr11	111908622	111913849	chr11:111908622-111913849	1	-	111908763	111911724	0	4	345,123,399,252,	0,1704,2901,4975,
#Partially deleted in new
chr11	111908628	111912010	chr11:111908628-111912010	1	-	111908763	111911724	0	4	339,123,294,92,	0,1698,2895,3290,
#Partially deleted in new
chr11	111908645	111913197	chr11:111908645-111913197	1	-	111908763	111911724	0	5	322,123,399,76,93,	0,1681,2878,3617,4459,
#Partially deleted in new
chr11	111908765	111910860	chr11:111908765-111910860	0	-	111908765	111910449	789624	3	202,123,28,	0,1561,2067,
#Partially deleted in new
chr11	111908767	111913347	chr11:111908767-111913347	0	-	111908767	111911724	789624	4	200,123,399,243,	0,1559,2756,4337,
#Partially deleted in new
chr11	111908770	111910830	chr11:111908770-111910830	0	-	111908770	111910449	789624	3	197,123,197,	0,1556,1863,
#Partially deleted in new
chr11	111908902	111913579	chr11:111908902-111913579	0	-	111908902	111911724	789624	4	65,123,399,108,	0,1424,2621,4569,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	111909761	111911816	chr11:111909761-111911816	1	-	111910182	111911724	789624	2	688,293,	0,1762,
#Deleted in new
chr11	111910418	111912927	chr11:111910418-111912927	0	-	111910418	111911724	789624	3	31,399,194,	0,1105,2315,
#Deleted in new
chr11	111910444	111913213	chr11:111910444-111913213	0	-	111910444	111911724	789624	3	5,399,75,	0,1079,2694,
#Deleted in new
chr11	111912241	111914093	chr11:111912241-111914093	3	+	111912829	111913895	789624	2	682,653,	0,1199,
#Partially deleted in new
chr11	111912735	111918850	chr11:111912735-111918850	2	+	111912829	111913895	789624	3	188,531,173,	0,705,5942,
#Partially deleted in new
chr11	111912741	111926871	chr11:111912741-111926871	1	+	111912829	111918742	789624	5	182,327,38,62,912,	0,5936,11584,12911,13218,
#Partially deleted in new
chr11	111918031	111925714	chr11:111918031-111925714	0	+	111918972	111925714	789624	4	141,310,38,62,	0,663,6294,7621,
#Partially deleted in new
chr11	111918876	111926872	chr11:111918876-111926872	3	+	111918972	111926199	789624	4	128,38,62,913,	0,5449,6776,7083,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	111918996	111926478	chr11:111918996-111926478	0	+	111918996	111918996	8553170	4	263,38,62,519,	0,5329,6656,6963,
#Partially deleted in new
chr11	111924244	111926379	chr11:111924244-111926379	0	+	111924244	111924244	8553170	3	119,62,420,	0,1408,1715,
#Partially deleted in new
chr11	111927143	111975995	chr11:111927143-111975995	1	+	111929853	111974987	0	6	244,93,130,126,232,1120,	0,2674,37405,41369,46879,47732,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	111928399	111928508	chr11:111928399-111928508	7	+	111928399	111928399	16724991	1	109,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr11	111937202	112022584	chr11:111937202-112022584	3	+	111937499	112019036	0	20	357,130,126,232,108,113,149,90,54,51,105,54,93,72,90,162,67,106,109,3629,	0,27346,31310,36820,37673,43534,45136,48029,49668,51802,55212,55748,56293,56466,57816,58200,58877,79488,80574,81753,
#Partially deleted in new
chr11	111937419	111974367	chr11:111937419-111974367	0	+	111937419	111937419	8553170	4	140,130,126,345,	0,27129,31093,36603,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	111945638	111946892	chr11:111945638-111946892	7	-	111945638	111945638	16724991	2	156,197,	0,1057,
#Partially deleted in new
chr11	111976905	111989055	chr11:111976905-111989055	0	+	111982451	111989055	789624	6	102,113,149,90,54,51,	0,3831,5433,8326,9965,12099,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr11	111977308	112021979	chr11:111977308-112021979	1	+	111977771	112019036	0	16	486,113,149,90,54,51,105,54,93,72,90,162,67,106,109,3024,	0,3428,5030,7923,9562,11696,15106,15642,16187,16360,17710,18094,18771,39382,40468,41647,
#Partially deleted in new
chr11	111982216	112021055	chr11:111982216-112021055	0	+	111982216	111982216	8553170	14	271,90,54,51,105,54,93,72,90,162,67,106,109,2100,	0,3015,4654,6788,10198,10734,11279,11452,12802,13186,13863,34474,35560,36739,
#Partially deleted in new
chr11	111988946	112019338	chr11:111988946-112019338	0	+	111988946	111988946	8553170	11	109,105,54,93,72,90,162,67,106,109,383,	0,3468,4004,4549,4722,6072,6456,7133,27744,28830,30009,
#Partially deleted in new
chr11	111993729	111996325	chr11:111993729-111996325	0	+	111993729	111993729	8553170	4	11,90,162,246,	0,1289,1673,2350,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	112015306	112016124	chr11:112015306-112016124	3	+	112015306	112015306	8553170	2	219,103,	0,715,
#Deleted in new
chr11	112017573	112019221	chr11:112017573-112019221	0	+	112017573	112017573	8553170	2	312,266,	0,1382,
#Partially deleted in new
chr11	112024813	112064390	chr11:112024813-112064390	3	+	112025472	112062535	0	14	938,102,125,154,127,188,154,68,93,108,116,163,137,1985,	0,1384,3701,3978,8590,12459,14430,18652,20324,21049,26420,35089,36224,37592,
#Partially deleted in new
chr11	112025407	112062771	chr11:112025407-112062771	0	+	112025472	112026243	789624	14	217,102,125,154,127,188,154,68,93,108,116,163,137,366,	0,790,3107,3384,7996,11865,13836,18058,19730,20455,25826,34495,35630,36998,
#Partially deleted in new
chr11	112025439	112064390	chr11:112025439-112064390	1	+	112025472	112062535	789624	12	312,102,125,154,154,68,93,108,116,163,137,1985,	0,758,3075,3352,13804,18026,19698,20423,25794,34463,35598,36966,
#Partially deleted in new
chr11	112025595	112062861	chr11:112025595-112062861	0	+	112025595	112062535	789624	12	156,85,42,188,154,68,93,108,116,163,137,456,	0,602,7893,11677,13648,17870,19542,20267,25638,34307,35442,36810,
#Partially deleted in new
chr11	112029857	112030367	chr11:112029857-112030367	7	-	112029857	112029857	16724991	1	510,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	112032498	112032598	chr11:112032498-112032598	3	-	112032498	112032498	8553170	1	100,	0,
#Deleted in new
chr11	112036626	112036863	chr11:112036626-112036863	7	-	112036626	112036626	16724991	1	237,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	112059994	112061547	chr11:112059994-112061547	0	+	112059994	112059994	8553170	2	71,510,	0,1043,
#Partially deleted in new
chr11	112064009	112073174	chr11:112064009-112073174	1	-	112064167	112073174	789624	5	212,266,246,124,177,	0,6426,7028,7625,8988,
#Partially deleted in new
chr11	112064012	112074171	chr11:112064012-112074171	1	-	112064167	112073174	789624	6	209,266,246,124,208,192,	0,6423,7025,7622,8985,9967,
#Partially deleted in new
chr11	112067797	112073980	chr11:112067797-112073980	1	-	112067870	112073174	789624	6	208,266,246,124,208,51,	0,2638,3240,3837,5200,6132,
#Partially deleted in new
chr11	112067800	112074171	chr11:112067800-112074171	3	-	112067870	112073174	789624	6	205,266,246,124,208,192,	0,2635,3237,3834,5197,6179,
#Partially deleted in new
chr11	112067929	112073091	chr11:112067929-112073091	0	-	112067929	112073091	789624	5	76,266,195,124,94,	0,2506,3108,3705,5068,
#Partially deleted in new
chr11	112069736	112074274	chr11:112069736-112074274	1	-	112070426	112073174	789624	5	965,246,124,208,295,	0,1301,1898,3261,4243,
#Partially deleted in new
chr11	112070992	112073069	chr11:112070992-112073069	0	-	112070992	112073069	789624	3	291,124,72,	0,642,2005,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	112071131	112073094	chr11:112071131-112073094	0	-	112071131	112071131	8553170	4	152,124,121,97,	0,503,1607,1866,
#Partially deleted in new
chr11	112074085	112084134	chr11:112074085-112084134	1	+	112075574	112082972	789624	6	273,77,101,150,54,1667,	0,1481,4129,6323,7896,8382,
#Partially deleted in new
chr11	112074286	112085150	chr11:112074286-112085150	1	+	112078232	112082972	789624	6	630,118,101,150,54,2686,	0,1280,3928,6122,7695,8178,
#Partially deleted in new
chr11	112074288	112085150	chr11:112074288-112085150	1	+	112075574	112082972	789624	6	628,77,101,150,54,2683,	0,1278,3926,6120,7693,8179,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	112074309	112082427	chr11:112074309-112082427	0	+	112074309	112074309	8553170	4	49,77,101,2019,	0,1257,3905,6099,
#Partially deleted in new
chr11	112074315	112085150	chr11:112074315-112085150	3	+	112075574	112082972	789624	6	601,77,101,150,54,2686,	0,1251,3899,6093,7666,8149,
#Partially deleted in new
chr11	112074315	112082945	chr11:112074315-112082945	0	+	112075574	112080423	789624	7	43,30,84,101,150,54,481,	0,571,1251,3899,6093,7666,8149,
#Partially deleted in new
chr11	112074315	112080512	chr11:112074315-112080512	0	+	112075574	112080512	789624	5	43,30,77,101,104,	0,571,1251,3899,6093,
#Partially deleted in new
chr11	112074330	112082822	chr11:112074330-112082822	0	+	112078232	112082822	789624	6	28,118,101,150,54,358,	0,1236,3884,6078,7651,8134,
#Partially deleted in new
chr11	112074784	112082568	chr11:112074784-112082568	0	+	112075611	112082568	789624	5	132,77,150,54,104,	0,782,5624,7197,7680,
#Partially deleted in new
chr11	112084799	112086795	chr11:112084799-112086795	1	-	112085294	112086723	789624	2	663,156,	0,1840,
#Partially deleted in new
chr11	112084799	112086798	chr11:112084799-112086798	0	-	112086295	112086723	789624	3	663,333,159,	0,1178,1840,
#Partially deleted in new
chr11	112084816	112086798	chr11:112084816-112086798	3	-	112085294	112086768	789624	2	646,159,	0,1823,
#Partially deleted in new
chr11	112085148	112086722	chr11:112085148-112086722	0	-	112085148	112085148	8553170	3	314,344,83,	0,818,1491,
#Partially deleted in new
chr11	112086772	112095794	chr11:112086772-112095794	3	+	112086907	112094970	789624	4	187,117,145,990,	0,1084,2094,8032,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	112086823	112089049	chr11:112086823-112089049	0	+	112086907	112088294	789624	4	136,117,291,183,	0,1033,1421,2043,
#Partially deleted in new
chr11	112086871	112095215	chr11:112086871-112095215	1	+	112086907	112094893	789624	4	88,117,138,411,	0,985,1995,7933,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	112086872	112120013	chr11:112086872-112120013	1	+	112086907	112119292	789624	4	87,117,145,722,	0,984,1994,32419,
#Partially deleted in new
chr11	112086872	112095505	chr11:112086872-112095505	1	+	112086907	112094893	789624	3	87,117,701,	0,984,7932,
#Partially deleted in new
chr11	112086898	112095388	chr11:112086898-112095388	1	+	112086907	112094970	789624	3	61,145,584,	0,1968,7906,
#Partially deleted in new
chr11	112086902	112193805	chr11:112086902-112193805	0	+	112086902	112086902	8553170	6	57,117,145,112,205,332,	0,954,1964,83516,92375,106571,
#Partially deleted in new
chr11	112086902	112179360	chr11:112086902-112179360	0	+	112086907	112170527	789624	6	57,117,145,112,52,83,	0,954,1964,83516,83720,92375,
#Partially deleted in new
chr11	112086902	112193561	chr11:112086902-112193561	3	+	112086907	112170527	789624	6	57,117,145,112,52,88,	0,954,1964,83516,83720,106571,
#Partially deleted in new
chr11	112086917	112095163	chr11:112086917-112095163	0	+	112086917	112091079	789624	5	42,117,145,54,359,	0,939,1949,4161,7887,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	112088866	112119442	chr11:112088866-112119442	0	+	112088866	112107566	789624	3	145,164,151,	0,18678,30425,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	112143250	112164117	chr11:112143250-112164117	3	-	112143595	112155053	0	6	567,134,135,12,87,212,	0,5352,6821,10341,11724,20655,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	112143252	112164074	chr11:112143252-112164074	1	-	112143595	112155053	0	5	565,134,135,87,169,	0,5350,6819,11722,20653,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	112143256	112151073	chr11:112143256-112151073	0	-	112143256	112143256	8553170	3	561,134,1002,	0,5346,6815,
#Partially deleted in new
chr11	112143595	112164089	chr11:112143595-112164089	1	-	112143595	112155053	0	6	222,134,135,12,108,184,	0,5007,6476,9996,11379,20310,
#Partially deleted in new
chr11	112143682	112164096	chr11:112143682-112164096	0	-	112143682	112143682	8553170	6	135,134,135,76,87,191,	0,4920,6389,7314,11292,20223,
#Partially deleted in new
chr11	112152998	112164093	chr11:112152998-112164093	0	-	112152998	112152998	8553170	3	605,87,188,	0,1976,10907,
#Partially deleted in new
chr11	112165196	112172606	chr11:112165196-112172606	3	-	112165196	112165196	8553170	4	323,101,118,52,	0,879,5196,7358,
#Partially deleted in new
chr11	112167323	112193626	chr11:112167323-112193626	0	+	112167323	112167323	8553170	4	91,79,112,153,	0,1929,3095,26150,
#Partially deleted in new
chr11	112167371	112172559	chr11:112167371-112172559	3	+	112169268	112171916	789624	5	116,79,112,52,788,	0,1881,3047,3251,4400,
#Partially deleted in new
chr11	112167371	112172264	chr11:112167371-112172264	1	+	112169268	112171916	789624	5	43,87,112,52,493,	0,1873,3047,3251,4400,
#Partially deleted in new
chr11	112175466	112218929	chr11:112175466-112218929	3	+	112175601	112217874	789624	12	223,205,224,116,103,129,161,168,138,183,111,1169,	0,3811,18007,18412,19186,24232,25146,26556,38257,39295,40753,42294,
#Partially deleted in new
chr11	112175509	112218141	chr11:112175509-112218141	0	+	112175509	112175509	8553170	10	180,205,1282,71,161,168,138,183,111,381,	0,3768,17964,24189,25103,26513,38214,39252,40710,42251,
#Partially deleted in new
chr11	112175511	112179845	chr11:112175511-112179845	0	+	112175511	112175511	8553170	2	178,568,	0,3766,
#Partially deleted in new
chr11	112175515	112200654	chr11:112175515-112200654	0	+	112175601	112193538	789624	4	174,224,129,42,	0,17958,24183,25097,
#Partially deleted in new
chr11	112175521	112218141	chr11:112175521-112218141	1	+	112175601	112217874	789624	10	168,205,224,129,161,168,138,183,111,381,	0,3756,17952,24177,25091,26501,38202,39240,40698,42239,
#Partially deleted in new
chr11	112175531	112193517	chr11:112175531-112193517	0	+	112175601	112179486	789624	3	158,292,44,	0,3746,17942,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	112175544	112215737	chr11:112175544-112215737	0	+	112175544	112175544	8553170	8	145,521,103,129,161,168,138,976,	0,17929,19108,24154,25068,26478,38179,39217,
#Partially deleted in new
chr11	112175545	112200773	chr11:112175545-112200773	0	+	112175601	112193538	789624	6	144,224,116,103,129,161,	0,17928,18333,19107,24153,25067,
#Partially deleted in new
chr11	112175671	112200671	chr11:112175671-112200671	0	+	112175671	112200671	789624	5	18,205,224,129,59,	0,3606,17802,24027,24941,
#Partially deleted in new
chr11	112175755	112218117	chr11:112175755-112218117	1	+	112179291	112217874	789624	12	703,205,224,116,103,129,161,168,138,183,111,357,	0,3522,17718,18123,18897,23943,24857,26267,37968,39006,40464,42005,
#Partially deleted in new
chr11	112175755	112193786	chr11:112175755-112193786	0	+	112175755	112175755	8553170	3	703,205,313,	0,3522,17718,
#Partially deleted in new
chr11	112176370	112218135	chr11:112176370-112218135	1	+	112179291	112217874	789624	12	88,205,224,116,103,129,161,168,138,165,111,375,	0,2907,17103,17508,18282,23328,24242,25652,37353,38391,39849,41390,
#Partially deleted in new
chr11	112176374	112217990	chr11:112176374-112217990	1	+	112193495	112217874	789624	11	84,224,116,103,129,161,168,138,183,111,230,	0,17099,17504,18278,23324,24238,25648,37349,38387,39845,41386,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	112176399	112224699	chr11:112176399-112224699	1	+	112179291	112217874	789624	13	59,205,224,116,103,129,161,168,138,183,111,129,767,	0,2878,17074,17479,18253,23299,24213,25623,37324,38362,39820,41361,47533,
#Partially deleted in new
chr11	112180772	112183191	chr11:112180772-112183191	7	+	112180772	112180772	16724991	3	400,440,326,	0,708,2093,
#Partially deleted in new
chr11	112193473	112214944	chr11:112193473-112214944	0	+	112193473	112214944	789624	5	212,116,168,138,183,	0,405,8549,20250,21288,
#Partially deleted in new
chr11	112200374	112202164	chr11:112200374-112202164	0	+	112200374	112200374	8553170	2	399,142,	0,1648,
#Deleted in new
chr11	112208600	112208898	chr11:112208600-112208898	7	+	112208600	112208600	16724991	1	298,	0,
#Partially deleted in new
chr11	112213841	112218119	chr11:112213841-112218119	0	+	112213841	112216316	789624	4	20,98,111,359,	0,920,2378,3919,
#Partially deleted in new
chr11	112214716	112218132	chr11:112214716-112218132	0	+	112214716	112214716	8553170	3	228,111,372,	0,1503,3044,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	112216108	112218157	chr11:112216108-112218157	0	+	112216108	112216108	8553170	2	222,397,	0,1652,
#Deleted in new
chr11	112218325	112218720	chr11:112218325-112218720	7	+	112218325	112218325	16724991	1	395,	0,
#Partially deleted in new
chr11	112226364	112233973	chr11:112226364-112233973	3	+	112226443	112233555	0	6	162,80,23,57,71,542,	0,2229,3843,4261,6798,7067,
#Partially deleted in new
chr11	112226366	112233909	chr11:112226366-112233909	0	+	112226443	112230630	789624	5	160,80,57,71,478,	0,2227,4259,6796,7065,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	112226368	112229504	chr11:112226368-112229504	0	+	112226368	112226368	8553170	2	158,911,	0,2225,
#Partially deleted in new
chr11	112226387	112269955	chr11:112226387-112269955	0	+	112226443	112230630	789624	7	139,80,57,71,186,54,399,	0,2206,4238,6775,9461,11065,43169,
#Partially deleted in new
chr11	112226431	112233810	chr11:112226431-112233810	1	+	112226443	112233185	789624	4	95,80,71,379,	0,2162,6731,7000,
#Partially deleted in new
chr11	112228272	112233810	chr11:112228272-112233810	1	+	112230643	112233555	789624	6	86,80,23,57,71,379,	0,321,1935,2353,4890,5159,
#Partially deleted in new
chr11	112230093	112233398	chr11:112230093-112233398	0	+	112230093	112230093	8553170	3	137,57,236,	0,532,3069,
#Partially deleted in new
chr11	112230265	112236006	chr11:112230265-112236006	0	+	112230265	112230265	8553170	3	417,71,158,	0,2897,5583,
#Partially deleted in new
chr11	112230398	112233677	chr11:112230398-112233677	0	+	112230398	112230398	8553170	3	284,71,246,	0,2764,3033,
#Deleted in new
chr11	112235370	112236025	chr11:112235370-112236025	7	-	112235370	112235370	16724991	1	655,	0,
#Partially deleted in new
chr11	112248478	112260860	chr11:112248478-112260860	3	-	112248798	112260589	789624	4	496,62,202,455,	0,3869,6909,11927,
#Deleted in new
chr11	112260264	112261396	chr11:112260264-112261396	3	+	112260264	112260264	789624	1	1132,	0,
#Deleted in new
chr11	112267289	112268371	chr11:112267289-112268371	7	-	112267289	112267289	16724991	1	1082,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	112270748	112362534	chr11:112270748-112362534	3	+	112270748	112270748	789624	4	35,203,45,2466,	0,22978,87354,89320,
#Partially deleted in new
chr11	112280485	112291776	chr11:112280485-112291776	0	+	112280485	112280485	8553170	2	240,457,	0,10834,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	112290200	112292721	chr11:112290200-112292721	1	+	112290200	112290200	8553170	2	309,1402,	0,1119,
#Partially deleted in new
chr11	112290267	112292170	chr11:112290267-112292170	0	+	112290267	112290267	8553170	2	242,924,	0,979,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	112292572	112294116	chr11:112292572-112294116	0	+	112292572	112292572	8553170	2	207,390,	0,1154,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	112393117	112541916	chr11:112393117-112541916	3	+	112393117	112393117	8553170	3	124,107,624,	0,187,148175,
#Deleted in new
chr11	112461467	112461920	chr11:112461467-112461920	7	-	112461467	112461467	16724991	1	453,	0,
#Partially deleted in new
chr11	112482231	112621729	chr11:112482231-112621729	1	+	112482231	112482231	8553170	4	224,111,142,43,	0,3437,59061,139455,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	112484344	112487836	chr11:112484344-112487836	1	+	112484344	112484344	789624	3	272,111,78,	0,1324,3414,
#Partially deleted in new
chr11	112534219	112555802	chr11:112534219-112555802	3	-	112534219	112534219	789624	4	1633,111,197,126,	0,14027,18945,21457,
#Deleted in new
chr11	112602353	112602452	chr11:112602353-112602452	3	-	112602353	112602353	8553170	1	99,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	112637341	112751131	chr11:112637341-112751131	3	+	112637341	112637341	8553170	5	94,70,384,123,983,	0,2340,23921,82877,112807,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	112787303	112795854	chr11:112787303-112795854	3	+	112787303	112787303	8553170	2	419,413,	0,8138,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	112959278	112963460	chr11:112959278-112963460	3	-	112959278	112959278	789624	3	1573,110,251,	0,2088,3931,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	112959534	112961962	chr11:112959534-112961962	0	-	112959534	112959534	8553170	3	1317,110,253,	0,1832,2175,
#Deleted in new
chr11	112960326	112961299	chr11:112960326-112961299	0	-	112960326	112960326	8553170	2	525,41,	0,932,
#Partially deleted in new
chr11	112961246	113278411	chr11:112961246-113278411	1	+	112961612	113275387	789624	20	414,11,68,219,144,138,118,170,143,30,151,185,97,171,132,128,178,208,117,3145,	0,42599,241139,243039,244276,244796,246014,246586,253122,260049,270398,270923,271471,271900,273786,294627,298899,308941,310513,314020,
#Partially deleted in new
chr11	112961246	113278411	chr11:112961246-113278411	1	+	112961612	113275387	789624	21	414,11,68,219,144,138,118,170,143,30,78,151,185,97,171,132,128,178,208,117,3145,	0,42599,241139,243039,244276,244796,246014,246586,253122,260049,269949,270398,270923,271471,271900,273786,294627,298899,308941,310513,314020,
#Partially deleted in new
chr11	112961246	113278411	chr11:112961246-113278411	1	+	112961612	113275387	789624	19	414,11,68,219,144,138,118,170,143,151,185,97,171,132,128,178,208,117,3145,	0,42599,241139,243039,244276,244796,246014,246586,253122,270398,270923,271471,271900,273786,294627,298899,308941,310513,314020,
#Partially deleted in new
chr11	112961246	113265195	chr11:112961246-113265195	1	+	112961612	113262925	789624	20	414,11,68,219,144,138,118,170,143,151,185,97,171,132,15,48,42,128,178,2350,	0,42599,241139,243039,244276,244796,246014,246586,253122,270398,270923,271471,271900,273786,275054,279539,281558,294627,298899,301599,
#Partially deleted in new
chr11	112961274	113275387	chr11:112961274-113275387	1	+	112961612	113275387	789624	21	390,75,219,144,138,118,170,143,30,78,151,185,97,171,132,3,125,178,208,117,121,	0,241104,243011,244248,244768,245986,246558,253094,260021,269921,270370,270895,271443,271872,273758,285093,294602,298871,308913,310485,313992,
#Partially deleted in new
chr11	112961367	113263012	chr11:112961367-113263012	1	+	112961612	113262925	789624	16	297,75,219,144,138,118,170,143,151,185,97,171,132,125,178,167,	0,241011,242918,244155,244675,245893,246465,253001,270277,270802,271350,271779,273665,294509,298778,301478,
#Partially deleted in new
chr11	112961367	113265197	chr11:112961367-113265197	1	+	112961612	113262925	0	17	297,75,219,144,138,118,170,143,151,185,97,171,132,3,125,178,2352,	0,241011,242918,244155,244675,245893,246465,253001,270277,270802,271350,271779,273665,285000,294509,298778,301478,
#Partially deleted in new
chr11	112961401	113278436	chr11:112961401-113278436	3	+	112961612	113275387	0	20	263,75,219,144,138,118,170,143,30,151,185,97,171,132,3,125,178,208,117,3170,	0,240977,242884,244121,244641,245859,246431,252967,259894,270243,270768,271316,271745,273631,284966,294475,298744,308786,310358,313865,
#Partially deleted in new
chr11	112961401	113232222	chr11:112961401-113232222	0	+	112961612	113232222	789624	4	263,143,151,53,	0,252967,270243,270768,
#Partially deleted in new
chr11	112961424	113041216	chr11:112961424-113041216	0	+	112961424	112961424	8553170	2	240,291,	0,79501,
#Partially deleted in new
chr11	112961434	113270239	chr11:112961434-113270239	0	+	112961612	113270239	789624	4	230,125,178,52,	0,294442,298711,308753,
#Partially deleted in new
chr11	112961435	113275489	chr11:112961435-113275489	1	+	112961612	113275387	0	19	229,75,219,144,138,118,170,143,151,185,97,171,132,3,125,178,208,117,223,	0,240943,242850,244087,244607,245825,246397,252933,270209,270734,271282,271711,273597,284932,294441,298710,308752,310324,313831,
#Partially deleted in new
chr11	112961436	113221903	chr11:112961436-113221903	1	+	112961612	113221331	0	9	228,75,219,144,138,118,170,143,608,	0,240942,242849,244086,244606,245824,246396,252932,259859,
#Partially deleted in new
chr11	112961438	113133951	chr11:112961438-113133951	0	+	112961438	112961438	8553170	2	226,503,	0,172010,
#Partially deleted in new
chr11	112961479	113263293	chr11:112961479-113263293	1	+	112961612	113262925	0	20	185,75,219,144,138,118,170,143,151,185,97,171,132,15,48,42,3,125,178,448,	0,240899,242806,244043,244563,245781,246353,252889,270165,270690,271238,271667,273553,274821,279306,281325,284888,294397,298666,301366,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	112977352	112977420	chr11:112977352-112977420	3	+	112977352	112977352	8553170	1	68,	0,
#Partially deleted in new
chr11	113130693	113205666	chr11:113130693-113205666	0	+	113130693	113130693	8553170	5	106,14,75,219,144,	0,2741,71685,73592,74829,
#Partially deleted in new
chr11	113132927	113275564	chr11:113132927-113275564	0	+	113132927	113132927	8553170	20	521,75,219,144,138,118,170,143,151,185,97,171,132,3,125,178,208,117,116,298,	0,69451,71358,72595,73115,74333,74905,81441,98717,99242,99790,100219,102105,113440,122949,127218,137260,138832,140005,142339,
#Deleted in new
chr11	113231379	113232748	chr11:113231379-113232748	0	+	113231379	113231379	8553170	3	416,185,31,	0,790,1338,
#Partially deleted in new
chr11	113232261	113260198	chr11:113232261-113260198	0	+	113232261	113260198	789624	7	93,97,171,132,15,125,53,	0,456,885,2771,4039,23615,27884,
#Partially deleted in new
chr11	113232324	113263267	chr11:113232324-113263267	0	+	113232324	113262925	789624	10	30,97,171,132,15,48,42,125,178,422,	0,393,822,2708,3976,8461,10480,23552,27821,30521,
#Partially deleted in new
chr11	113232792	113263293	chr11:113232792-113263293	0	+	113232792	113243619	789624	11	22,171,132,15,48,42,239,3,125,178,448,	0,354,2240,3508,7993,10012,10759,13575,23084,27353,30053,
#Partially deleted in new
chr11	113232794	113275963	chr11:113232794-113275963	0	+	113232794	113275387	789624	8	20,171,132,125,178,208,117,697,	0,352,2238,23082,27351,37393,38965,42472,
#Partially deleted in new
chr11	113233146	113275448	chr11:113233146-113275448	0	+	113233146	113275387	789624	10	171,132,15,48,3,125,178,208,117,182,	0,1886,3154,7639,13221,22730,26999,37041,38613,42120,
#Partially deleted in new
chr11	113233257	113260387	chr11:113233257-113260387	0	+	113233257	113233257	8553170	4	60,132,125,242,	0,1775,22619,26888,
#Partially deleted in new
chr11	113240506	113260275	chr11:113240506-113260275	0	+	113240506	113240506	8553170	4	327,3,125,130,	0,5861,15370,19639,
#Partially deleted in new
chr11	113246107	113260317	chr11:113246107-113260317	0	+	113246107	113246107	8553170	3	263,125,172,	0,9769,14038,
#Partially deleted in new
chr11	113255949	113263174	chr11:113255949-113263174	0	+	113255949	113262925	789624	3	52,178,272,	0,4196,6953,
#Deleted in new
chr11	113260090	113263177	chr11:113260090-113263177	0	+	113260090	113260090	8553170	2	233,332,	0,2755,
#Partially deleted in new
chr11	113260180	113275740	chr11:113260180-113275740	0	+	113260180	113275387	789624	5	143,208,117,816,474,	0,10007,11579,12752,15086,
#Partially deleted in new
chr11	113269531	113273806	chr11:113269531-113273806	3	-	113269531	113269531	789624	3	117,318,183,	0,672,4092,
#Partially deleted in new
chr11	113269718	113273901	chr11:113269718-113273901	1	-	113269718	113269718	8553170	2	803,278,	0,3905,
#Partially deleted in new
chr11	113269968	113275282	chr11:113269968-113275282	0	+	113269968	113269968	8553170	3	427,117,16,	0,1791,5298,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	113278436	113283990	chr11:113278436-113283990	1	-	113278436	113278436	8553170	4	307,160,142,134,	0,1053,2054,5420,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	113278552	113314424	chr11:113278552-113314424	3	-	113278552	113278552	8553170	4	191,160,142,95,	0,937,1938,35777,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	113279382	113314437	chr11:113279382-113314437	0	-	113279382	113279382	8553170	3	267,142,108,	0,1108,34947,
#Partially deleted in new
chr11	113314528	113366392	chr11:113314528-113366392	3	+	113316257	113366300	789624	22	90,73,164,22,78,122,60,72,61,189,70,89,169,93,61,138,99,69,102,100,226,168,	0,1714,8759,9465,10076,10995,15391,20437,24245,24757,26135,27308,29743,35544,36710,37541,44834,45411,47872,49299,50306,51696,
#Partially deleted in new
chr11	113314578	113324682	chr11:113314578-113324682	0	+	113316257	113324682	789624	5	40,365,164,22,78,	0,1372,8709,9415,10026,
#Partially deleted in new
chr11	113314578	113338803	chr11:113314578-113338803	0	+	113316257	113338803	789624	10	40,103,73,164,22,78,122,60,72,30,	0,1372,1664,8709,9415,10026,10945,15341,20387,24195,
#Partially deleted in new
chr11	113314582	113338800	chr11:113314582-113338800	0	+	113316257	113338800	789624	8	36,73,164,22,78,122,72,27,	0,1660,8705,9411,10022,10941,20383,24191,
#Partially deleted in new
chr11	113314582	113338785	chr11:113314582-113338785	0	+	113323304	113338785	789624	8	36,164,22,78,122,60,72,12,	0,8705,9411,10022,10941,15337,20383,24191,
#Partially deleted in new
chr11	113314590	113340733	chr11:113314590-113340733	0	+	113316257	113340733	789624	9	28,73,164,22,78,122,61,189,70,	0,1652,8697,9403,10014,10933,24183,24695,26073,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr11	113314601	113366386	chr11:113314601-113366386	0	+	113316257	113329650	789624	23	599,73,164,22,78,122,167,60,72,61,189,70,89,169,93,61,138,99,69,102,100,226,162,	0,1641,8686,9392,10003,10922,15040,15318,20364,24172,24684,26062,27235,29670,35471,36637,37468,44761,45338,47799,49226,50233,51623,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr11	113314606	113373297	chr11:113314606-113373297	0	+	113316257	113368343	789624	23	12,73,164,22,78,122,60,72,61,189,70,89,169,93,61,138,99,69,102,100,226,277,174,	0,1636,8681,9387,9998,10917,15313,20359,24167,24679,26057,27230,29665,35466,36632,37463,44756,45333,47794,49221,50228,53580,58517,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr11	113314810	113383544	chr11:113314810-113383544	1	+	113316257	113383418	789624	22	390,73,164,22,78,122,60,72,61,189,70,89,169,93,61,138,99,69,102,100,152,168,	0,1432,8477,9183,9794,10713,15109,20155,23963,24475,25853,27026,29461,35262,36428,37259,44552,45129,47590,49017,53614,68566,
#Partially deleted in new
chr11	113314853	113329977	chr11:113314853-113329977	0	+	113316257	113329977	789624	7	313,73,164,22,78,122,58,	0,1389,8434,9140,9751,10670,15066,
#Partially deleted in new
chr11	113315055	113339439	chr11:113315055-113339439	0	+	113316261	113339439	789624	4	145,73,61,154,	0,1187,23718,24230,
#Partially deleted in new
chr11	113315063	113324210	chr11:113315063-113324210	0	+	113315063	113315063	8553170	4	137,73,164,217,	0,1179,8224,8930,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr11	113316238	113373294	chr11:113316238-113373294	1	+	113316257	113368343	789624	22	77,164,22,78,122,60,72,61,189,70,89,169,93,61,138,99,69,102,100,226,277,171,	0,7049,7755,8366,9285,13681,18727,22535,23047,24425,25598,28033,33834,35000,35831,43124,43701,46162,47589,48596,51948,56885,
#Partially deleted in new
chr11	113316240	113366387	chr11:113316240-113366387	1	+	113316257	113366300	789624	21	75,164,22,78,122,60,90,61,189,70,89,169,93,61,138,99,69,102,100,226,163,	0,7047,7753,8364,9283,13679,18707,22533,23045,24423,25596,28031,33832,34998,35829,43122,43699,46160,47587,48594,49984,
#Partially deleted in new
chr11	113316240	113325703	chr11:113316240-113325703	0	+	113316240	113316240	8553170	5	75,164,22,78,180,	0,7047,7753,8364,9283,
#Partially deleted in new
chr11	113325608	113360008	chr11:113325608-113360008	0	+	113325608	113352070	789624	8	37,60,72,54,29,138,99,69,	0,4311,9357,13165,25662,26461,33754,34331,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	113329729	113338813	chr11:113329729-113338813	0	+	113329729	113329729	8553170	3	250,72,40,	0,5236,9044,
#Partially deleted in new
chr11	113335026	113339555	chr11:113335026-113339555	0	+	113335026	113335026	8553170	3	11,61,270,	0,3747,4259,
#Partially deleted in new
chr11	113341654	113359997	chr11:113341654-113359997	0	+	113341654	113341654	8553170	7	271,169,93,61,138,99,58,	0,2617,8418,9584,10415,17708,18285,
#Partially deleted in new
chr11	113362451	113371541	chr11:113362451-113371541	0	+	113362451	113368284	789624	4	51,100,277,107,	0,1376,5735,8983,
#Deleted in new
chr11	113364380	113366387	chr11:113364380-113366387	0	+	113364380	113364380	8553170	3	314,226,163,	0,454,1844,
#Deleted in new
chr11	113364783	113366386	chr11:113364783-113366386	0	+	113364783	113364783	8553170	3	277,97,162,	0,695,1441,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	113368477	113369117	chr11:113368477-113369117	3	+	113368477	113368477	8553170	1	640,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	113387790	113400418	chr11:113387790-113400418	3	+	113387884	113400267	789624	8	279,295,152,50,156,119,37,1455,	0,5690,7138,7568,8276,9433,10189,11173,
#Deleted in new
chr11	113393632	113396174	chr11:113393632-113396174	0	+	113393632	113394748	789624	5	143,55,152,50,108,	0,1095,1296,1726,2434,
#Deleted in new
chr11	113405320	113412117	chr11:113405320-113412117	3	+	113405320	113405320	8553170	4	164,80,187,93,	0,567,6226,6704,
#Partially deleted in new
chr11	113409614	113475120	chr11:113409614-113475120	1	-	113410726	113424651	0	7	1306,328,191,137,110,316,45,	0,2941,5806,7248,8412,14752,65461,
#Partially deleted in new
chr11	113409614	113475389	chr11:113409614-113475389	3	-	113410726	113424651	0	8	1306,328,87,191,137,110,316,314,	0,2941,4760,5806,7248,8412,14752,65461,
#Partially deleted in new
chr11	113409615	113424684	chr11:113409615-113424684	1	-	113410726	113424651	789624	7	1305,328,87,191,137,103,322,	0,2940,4759,5805,7247,8411,14747,
#Partially deleted in new
chr11	113409912	113424972	chr11:113409912-113424972	1	-	113410726	113424651	0	7	1008,328,87,191,137,110,606,	0,2643,4462,5508,6950,8114,14454,
#Partially deleted in new
chr11	113410571	113424651	chr11:113410571-113424651	1	-	113410726	113424651	0	8	349,328,6,87,191,137,110,285,	0,1984,2763,3803,4849,6291,7455,13795,
#Partially deleted in new
chr11	113413863	113475691	chr11:113413863-113475691	0	-	113413863	113413863	8553170	6	598,191,137,110,316,34,	0,1557,2999,4163,10503,61794,
#Partially deleted in new
chr11	113414374	113424507	chr11:113414374-113424507	0	-	113414374	113414374	8553170	4	87,191,110,141,	0,1046,3652,9992,
#Deleted in new
chr11	113415293	113418117	chr11:113415293-113418117	0	-	113415293	113415293	8553170	3	318,137,91,	0,1569,2733,
#Partially deleted in new
chr11	113416862	113447721	chr11:113416862-113447721	0	-	113416862	113424651	789624	4	137,110,316,151,	0,1164,7504,30708,
#Partially deleted in new
chr11	113424629	113475279	chr11:113424629-113475279	0	-	113424629	113424651	789624	3	53,186,204,	0,49600,50446,
#Deleted in new
chr11	113450022	113450088	chr11:113450022-113450088	3	-	113450022	113450022	5263520	1	66,	0,
#Partially deleted in new
chr11	113687545	113706373	chr11:113687545-113706373	3	-	113688259	113706224	789624	13	729,153,143,99,179,163,44,114,136,123,99,103,152,	0,2219,2685,3295,5525,6932,7854,9312,9737,11359,12049,12520,18676,
#Partially deleted in new
chr11	113687545	113706302	chr11:113687545-113706302	1	-	113688259	113706224	789624	13	729,153,143,99,179,163,44,114,136,123,99,103,81,	0,2219,2685,3295,5525,6932,7854,9312,9737,11359,12049,12520,18676,
#Partially deleted in new
chr11	113687546	113706373	chr11:113687546-113706373	1	-	113688259	113700040	789624	13	728,153,143,99,179,163,44,114,136,123,99,207,152,	0,2218,2684,3294,5524,6931,7853,9311,9736,11358,12048,12415,18675,
#Partially deleted in new
chr11	113687549	113706306	chr11:113687549-113706306	1	-	113688259	113694485	789624	10	725,143,99,179,163,44,114,136,123,85,	0,2681,3291,5521,6928,7850,9308,9733,11355,18672,
#Partially deleted in new
chr11	113687549	113706343	chr11:113687549-113706343	1	-	113688259	113694485	789624	11	725,153,143,99,179,163,44,114,136,123,122,	0,2215,2681,3291,5521,6928,7850,9308,9733,11355,18672,
#Partially deleted in new
chr11	113687696	113706346	chr11:113687696-113706346	1	-	113688259	113699667	789624	12	578,153,143,99,179,163,44,114,136,123,99,125,	0,2068,2534,3144,5374,6781,7703,9161,9586,11208,11898,18525,
#Partially deleted in new
chr11	113687696	113706346	chr11:113687696-113706346	0	-	113700036	113706224	789624	13	578,153,143,99,179,163,44,114,136,123,99,207,125,	0,2068,2534,3144,5374,6781,7703,9161,9586,11208,11898,12265,18525,
#Partially deleted in new
chr11	113687980	113706302	chr11:113687980-113706302	1	-	113688259	113706224	789624	11	294,153,143,99,179,114,136,123,99,103,81,	0,1784,2250,2860,5090,8877,9302,10924,11614,12085,18241,
#Partially deleted in new
chr11	113688087	113706308	chr11:113688087-113706308	1	-	113688259	113699667	789624	10	187,153,143,99,179,114,136,123,99,87,	0,1677,2143,2753,4983,8770,9195,10817,11507,18134,
#Partially deleted in new
chr11	113690229	113693737	chr11:113690229-113693737	0	-	113690229	113690229	8553170	4	144,99,179,134,	0,611,2841,3374,
#Partially deleted in new
chr11	113690951	113694414	chr11:113690951-113694414	0	-	113690951	113690951	8553170	3	47,179,54,	0,2119,3409,
#Partially deleted in new
chr11	113693206	113706302	chr11:113693206-113706302	0	-	113693206	113694485	789624	6	43,163,44,114,136,81,	0,1271,2193,3651,4076,13015,
#Partially deleted in new
chr11	113693225	113706302	chr11:113693225-113706302	0	-	113693225	113694485	789624	6	24,163,44,136,136,81,	0,1252,2174,3610,4057,12996,
#Partially deleted in new
chr11	113698837	113706308	chr11:113698837-113706308	0	-	113700036	113706224	789624	4	190,99,207,87,	0,757,1124,7384,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	113711719	113712398	chr11:113711719-113712398	7	+	113711719	113711719	16724991	1	679,	0,
#Partially deleted in new
chr11	113733186	113773811	chr11:113733186-113773811	3	-	113733693	113773666	789624	16	628,203,132,131,170,72,239,183,164,192,153,160,78,102,135,250,	0,3433,4385,5077,6026,8507,10615,14344,15070,24475,25367,27022,27326,27630,35646,40375,
#Partially deleted in new
chr11	113733274	113773691	chr11:113733274-113773691	0	-	113736770	113773666	789624	16	540,154,132,131,170,72,239,183,164,192,153,160,78,102,135,130,	0,3345,4297,4989,5938,8419,10527,14256,14982,24387,25279,26934,27238,27542,35558,40287,
#Partially deleted in new
chr11	113747639	113773735	chr11:113747639-113773735	0	-	113757838	113773666	789624	6	74,164,192,153,135,174,	0,617,10022,10914,21193,25922,
#Partially deleted in new
chr11	113751115	113751286	chr11:113751115-113751286	7	-	113751115	113751115	16724991	1	171,	0,
#Partially deleted in new
chr11	113769659	113769994	chr11:113769659-113769994	7	+	113769659	113769659	16724991	1	335,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	113770392	113771691	chr11:113770392-113771691	3	-	113770392	113770392	8553170	2	164,422,	0,877,
#Partially deleted in new
chr11	113779746	113780500	chr11:113779746-113780500	3	+	113779795	113780485	789624	1	754,	0,
#Partially deleted in new
chr11	113789230	113791160	chr11:113789230-113791160	7	+	113789230	113789230	16724991	1	1930,	0,
#Partially deleted in new
chr11	113789241	113790027	chr11:113789241-113790027	7	+	113789241	113789241	16724991	1	786,	0,
#Partially deleted in new
chr11	113790317	113791366	chr11:113790317-113791366	5	+	113790317	113790317	16724991	1	1049,	0,
#Partially deleted in new
chr11	113791465	113791752	chr11:113791465-113791752	7	+	113791465	113791465	16724991	1	287,	0,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr11	113797873	113875570	chr11:113797873-113875570	3	-	113799239	113875501	0	25	1542,196,124,80,79,179,96,140,192,229,71,209,180,96,128,149,77,74,138,87,160,106,133,78,126,	0,3609,5284,5924,6799,6994,8615,10424,11189,14402,16011,17300,19784,25731,29359,31323,32993,34046,35546,36375,42724,43789,54627,56384,77571,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr11	113798091	113829467	chr11:113798091-113829467	1	-	113799239	113829379	789624	15	1324,196,124,80,79,179,140,192,229,71,209,180,96,128,271,	0,3391,5066,5706,6581,6776,10206,10971,14184,15793,17082,19566,25513,29141,31105,
#Partially deleted in new
chr11	113798804	113875570	chr11:113798804-113875570	1	-	113799239	113840756	789624	22	611,196,124,80,79,179,140,192,229,71,209,180,96,128,149,77,74,138,87,160,106,126,	0,2678,4353,4993,5868,6063,9493,10258,13471,15080,16369,18853,24800,28428,30392,32062,33115,34615,35444,41793,42858,76640,
#Partially deleted in new
chr11	113798978	113801701	chr11:113798978-113801701	0	-	113798978	113798978	8553170	2	437,219,	0,2504,
#Partially deleted in new
chr11	113799061	113875566	chr11:113799061-113875566	0	-	113835276	113875501	789624	23	354,196,124,80,79,179,140,192,139,67,96,128,149,77,70,138,87,121,160,106,133,78,122,	0,2421,4096,4736,5611,5806,9236,10001,13214,21230,24543,28171,30135,31805,32858,34358,35187,36145,41536,42601,53439,55196,76383,
#Partially deleted in new
chr11	113804927	113809175	chr11:113804927-113809175	0	-	113804927	113809175	789624	5	119,96,114,140,113,	0,1561,3095,3370,4135,
#Partially deleted in new
chr11	113812278	113833470	chr11:113812278-113833470	0	-	113812278	113833470	789624	9	226,71,209,96,128,149,77,74,51,	0,1606,2895,11326,14954,16918,18588,19641,21141,
#Partially deleted in new
chr11	113813754	113875528	chr11:113813754-113875528	1	-	113813875	113875501	0	15	201,209,180,96,128,149,77,74,138,87,160,106,133,78,84,	0,1419,3903,9850,13478,15442,17112,18165,19665,20494,26843,27908,38746,40503,61690,
#Partially deleted in new
chr11	113815263	113833552	chr11:113815263-113833552	0	-	113830922	113833552	789624	7	113,37,96,128,149,77,133,	0,2394,8341,11969,13933,15603,18156,
#Partially deleted in new
chr11	113817705	113833517	chr11:113817705-113833517	0	-	113830922	113833517	789624	6	132,96,128,149,80,98,	0,5899,9527,11491,13161,15714,
#Partially deleted in new
chr11	113817830	113830976	chr11:113817830-113830976	0	-	113828905	113830976	789624	6	7,96,128,77,149,110,	0,5774,9402,11013,11366,13036,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	113818076	113822458	chr11:113818076-113822458	3	+	113818076	113818076	8553170	3	131,3,24,	0,2363,4358,
#Deleted in new
chr11	113820855	113821885	chr11:113820855-113821885	7	-	113820855	113820855	16724991	1	1030,	0,
#Partially deleted in new
chr11	113829220	113875496	chr11:113829220-113875496	0	-	113829220	113875496	789624	7	125,77,74,138,160,106,52,	0,1646,2699,4199,11377,12442,46224,
#Partially deleted in new
chr11	113830882	113875533	chr11:113830882-113875533	0	-	113830882	113830882	8553170	8	61,138,87,160,106,133,78,89,	0,2537,3366,9715,10780,21618,23375,44562,
#Partially deleted in new
chr11	113852526	113875536	chr11:113852526-113875536	0	-	113852526	113874564	789624	4	107,78,284,92,	0,1731,21990,22918,
#Partially deleted in new
chr11	113852621	113875533	chr11:113852621-113875533	0	-	113852621	113874564	789624	4	12,78,363,89,	0,1636,21895,22823,
#Deleted in new
chr11	113859345	113859449	chr11:113859345-113859449	3	+	113859345	113859345	8553170	1	104,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	113904676	113946565	chr11:113904676-113946565	3	+	113904933	113946137	789624	9	309,161,45,110,170,158,211,183,664,	0,4618,26707,27081,27612,28259,38305,39896,41225,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	113908991	113946252	chr11:113908991-113946252	1	+	113909275	113946137	789624	8	464,45,110,170,158,211,183,351,	0,22392,22766,23297,23944,33990,35581,36910,
#Partially deleted in new
chr11	113931384	113944702	chr11:113931384-113944702	0	+	113931384	113944617	789624	5	44,110,170,158,130,	0,373,904,1551,13188,
#Partially deleted in new
chr11	113974880	113990313	chr11:113974880-113990313	1	+	113975325	113989763	789624	9	512,152,45,110,170,161,211,222,849,	0,2890,4352,6322,8239,11134,11637,11944,14584,
#Partially deleted in new
chr11	113975074	113990310	chr11:113975074-113990310	3	+	113975307	113989763	789624	8	318,152,45,110,170,161,529,846,	0,2696,4158,6128,8045,10940,11443,14390,
#Partially deleted in new
chr11	113975074	113990310	chr11:113975074-113990310	1	+	113975307	113989763	789624	9	318,152,45,110,170,161,211,222,846,	0,2696,4158,6128,8045,10940,11443,11750,14390,
#Partially deleted in new
chr11	113975187	113990313	chr11:113975187-113990313	1	+	113975325	113989763	789624	8	205,152,45,110,170,161,529,849,	0,2583,4045,6015,7932,10827,11330,14277,
#Partially deleted in new
chr11	113975285	113989832	chr11:113975285-113989832	0	+	113975325	113986690	789624	8	107,152,45,110,170,211,222,368,	0,2485,3947,5917,7834,11232,11539,14179,
#Partially deleted in new
chr11	113977499	113990310	chr11:113977499-113990310	1	+	113977554	113989763	789624	9	77,152,45,110,170,161,211,222,846,	0,271,1733,3703,5620,8515,9018,9325,11965,
#Partially deleted in new
chr11	113981035	113986911	chr11:113981035-113986911	0	+	113981035	113981035	8553170	5	277,170,161,211,87,	0,2084,4979,5482,5789,
#Partially deleted in new
chr11	114059592	114250676	chr11:114059592-114250676	3	+	114063300	114250555	0	7	290,1358,98,87,171,168,351,	0,3618,96744,127359,182574,187605,190733,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	114059724	114189764	chr11:114059724-114189764	0	+	114059724	114059724	8553170	4	158,1358,98,2813,	0,3486,96612,127227,
#Partially deleted in new
chr11	114059736	114063646	chr11:114059736-114063646	0	+	114063300	114063646	789624	3	146,191,436,	0,1634,3474,
#Partially deleted in new
chr11	114060256	114063744	chr11:114060256-114063744	0	+	114063300	114063744	789624	2	38,534,	0,2954,
#Partially deleted in new
chr11	114060506	114250652	chr11:114060506-114250652	1	+	114063300	114250555	0	7	78,1358,98,87,171,168,327,	0,2704,95830,126445,181660,186691,189819,
#Partially deleted in new
chr11	114064411	114247344	chr11:114064411-114247344	0	+	114064411	114121827	789624	6	157,97,98,87,171,147,	0,57406,91925,122540,177755,182786,
#Partially deleted in new
chr11	114180765	114247296	chr11:114180765-114247296	0	+	114180765	114180765	8553170	4	177,87,171,99,	0,6186,61401,66432,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	114210615	114356571	chr11:114210615-114356571	3	-	114210615	114210615	8553170	3	337,6,50,	0,58868,145906,
#Partially deleted in new
chr11	114237206	114250557	chr11:114237206-114250557	0	+	114237206	114237206	8553170	4	134,171,168,232,	0,4960,9991,13119,
#Partially deleted in new
chr11	114246789	114250476	chr11:114246789-114250476	0	+	114246789	114246789	8553170	2	576,151,	0,3536,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	114257786	114270517	chr11:114257786-114270517	0	+	114257786	114257786	8553170	3	92,87,200,	0,5061,12531,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	114257830	114313285	chr11:114257830-114313285	3	+	114296556	114312477	0	5	48,87,283,208,1241,	0,5017,38597,40120,54214,
#Partially deleted in new
chr11	114262887	114312208	chr11:114262887-114312208	0	+	114262887	114262887	8553170	3	47,140,164,	0,7430,49157,
#Partially deleted in new
chr11	114295824	114312560	chr11:114295824-114312560	1	+	114296556	114312477	0	3	886,208,516,	0,2126,16220,
#Partially deleted in new
chr11	114296422	114298327	chr11:114296422-114298327	0	+	114296422	114296422	8553170	2	288,377,	0,1528,
#Partially deleted in new
chr11	114297362	114312516	chr11:114297362-114312516	0	+	114297362	114297362	8553170	3	36,208,472,	0,588,14682,
#Partially deleted in new
chr11	114298095	114312515	chr11:114298095-114312515	0	+	114298095	114298095	8553170	2	40,471,	0,13949,
#Partially deleted in new
chr11	114298150	114312515	chr11:114298150-114312515	0	+	114298150	114298150	8553170	2	44,471,	0,13894,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	114360634	114380045	chr11:114360634-114380045	3	-	114360634	114360634	789624	3	3533,251,53,	0,18105,19358,
#Partially deleted in new
chr11	114391442	114400417	chr11:114391442-114400417	3	-	114391564	114400331	789624	2	223,429,	0,8546,
#Deleted in new
chr11	114398531	114400511	chr11:114398531-114400511	1	-	114399959	114400331	789624	1	1980,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	114400029	114410607	chr11:114400029-114410607	3	+	114400671	114407807	0	5	738,163,88,91,3163,	0,1668,2798,5679,7415,
#Partially deleted in new
chr11	114400528	114408924	chr11:114400528-114408924	1	+	114400671	114407807	789624	5	239,163,88,94,1480,	0,1169,2299,5177,6916,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	114400528	114410610	chr11:114400528-114410610	1	+	114405721	114407807	789624	4	239,88,94,3166,	0,2299,5177,6916,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	114400606	114412018	chr11:114400606-114412018	1	+	114400671	114405808	789624	4	161,163,88,6313,	0,1091,2221,5099,
#Partially deleted in new
chr11	114400612	114407819	chr11:114400612-114407819	0	+	114400671	114405734	789624	4	155,88,94,375,	0,2215,5093,6832,
#Partially deleted in new
chr11	114400665	114408909	chr11:114400665-114408909	0	+	114400671	114405734	789624	5	102,163,84,94,1465,	0,1032,2166,5040,6779,
#Partially deleted in new
chr11	114400665	114414203	chr11:114400665-114414203	1	+	114400671	114414180	789624	5	102,163,88,91,248,	0,1032,2162,5043,13290,
#Partially deleted in new
chr11	114400673	114408123	chr11:114400673-114408123	1	+	114405721	114407807	789624	3	94,94,679,	0,5032,6771,
#Partially deleted in new
chr11	114400681	114443932	chr11:114400681-114443932	3	+	114400681	114431543	789624	7	86,163,88,94,137,84,77,	0,1016,2146,5024,30847,39974,43174,
#Deleted in new
chr11	114400699	114402195	chr11:114400699-114402195	0	+	114400699	114400699	8553170	2	68,498,	0,998,
#Partially deleted in new
chr11	114439385	114450279	chr11:114439385-114450279	3	+	114439528	114449975	789624	7	290,84,78,112,109,54,434,	0,1270,4470,5155,6593,8440,10460,
#Partially deleted in new
chr11	114439385	114450276	chr11:114439385-114450276	1	+	114439528	114449975	789624	7	290,84,78,112,109,54,431,	0,1270,4470,5155,6593,8440,10460,
#Partially deleted in new
chr11	114439434	114444378	chr11:114439434-114444378	0	+	114439434	114439434	8553170	3	241,84,523,	0,1221,4421,
#Deleted in new
chr11	114439465	114441902	chr11:114439465-114441902	1	+	114439528	114441771	789624	3	210,84,158,	0,1190,2279,
#Partially deleted in new
chr11	114439470	114450039	chr11:114439470-114450039	1	+	114439528	114449975	789624	7	205,84,78,67,109,54,194,	0,1185,4385,5115,6508,8355,10375,
#Partially deleted in new
chr11	114439483	114450279	chr11:114439483-114450279	1	+	114439528	114449854	789624	3	192,84,434,	0,1172,10362,
#Partially deleted in new
chr11	114439487	114446357	chr11:114439487-114446357	0	+	114439487	114439487	8553170	3	188,84,379,	0,1168,6491,
#Deleted in new
chr11	114439494	114441026	chr11:114439494-114441026	0	+	114439494	114439494	8553170	2	181,371,	0,1161,
#Partially deleted in new
chr11	114439498	114447852	chr11:114439498-114447852	0	+	114439528	114446035	789624	5	177,84,78,109,27,	0,1157,4357,6480,8327,
#Partially deleted in new
chr11	114439510	114450056	chr11:114439510-114450056	0	+	114439528	114446035	789624	4	165,109,54,211,	0,6468,8315,10335,
#Partially deleted in new
chr11	114439545	114449917	chr11:114439545-114449917	0	+	114439545	114446035	789624	5	130,84,109,54,72,	0,1110,6433,8280,10300,
#Partially deleted in new
chr11	114439581	114450062	chr11:114439581-114450062	0	+	114439581	114449975	789624	6	94,78,112,109,54,217,	0,4274,4959,6397,8244,10264,
#Partially deleted in new
chr11	114439760	114444207	chr11:114439760-114444207	0	+	114439760	114439760	8553170	3	27,84,352,	0,895,4095,
#Partially deleted in new
chr11	114440120	114450262	chr11:114440120-114450262	1	+	114440655	114449975	789624	7	26,84,78,112,109,54,417,	0,535,3735,4420,5858,7705,9725,
#Partially deleted in new
chr11	114440670	114450261	chr11:114440670-114450261	0	+	114440670	114446035	789624	5	69,78,109,54,416,	0,3185,5308,7155,9175,
#Partially deleted in new
chr11	114444151	114450265	chr11:114444151-114450265	0	+	114444151	114444151	8553170	4	43,109,54,420,	0,1827,3674,5694,
#Partially deleted in new
chr11	114444154	114450265	chr11:114444154-114450265	0	+	114444154	114444154	8553170	5	58,112,109,54,420,	0,386,1824,3671,5691,
#Partially deleted in new
chr11	114444154	114450265	chr11:114444154-114450265	0	+	114444154	114444154	8553170	4	498,109,54,420,	0,1824,3671,5691,
#Partially deleted in new
chr11	114445117	114449909	chr11:114445117-114449909	0	+	114445117	114445117	8553170	3	970,54,64,	0,2708,4728,
#Deleted in new
chr11	114448936	114450184	chr11:114448936-114450184	0	+	114448936	114448936	8553170	2	302,339,	0,909,
#Deleted in new
chr11	114453063	114454123	chr11:114453063-114454123	7	+	114453063	114453063	16724991	1	1060,	0,
#Deleted in new
chr11	114512705	114513431	chr11:114512705-114513431	7	-	114512705	114512705	16724991	1	726,	0,
#Deleted in new
chr11	114517863	114518371	chr11:114517863-114518371	7	+	114517863	114517863	16724991	1	508,	0,
#Partially deleted in new
chr11	114521644	114559895	chr11:114521644-114559895	3	-	114521967	114551201	789624	9	859,213,62,734,109,59,112,29,98,	0,1234,6195,8530,29458,29738,30329,31207,38153,
#Partially deleted in new
chr11	114521714	114559858	chr11:114521714-114559858	1	-	114521967	114530581	789624	6	789,213,62,734,29,61,	0,1164,6125,8460,31137,38083,
#Partially deleted in new
chr11	114521714	114530020	chr11:114521714-114530020	0	-	114521714	114521714	8553170	4	789,213,62,1225,	0,1164,6125,7081,
#Partially deleted in new
chr11	114521715	114551201	chr11:114521715-114551201	1	-	114521967	114551201	789624	5	788,213,62,734,99,	0,1163,6124,8459,29387,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	114526511	114554370	chr11:114526511-114554370	1	-	114527883	114551201	789624	9	181,62,37,734,109,59,112,29,683,	0,1328,2284,3663,24591,24871,25462,26340,27176,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	114527128	114527232	chr11:114527128-114527232	3	+	114527128	114527128	8553170	1	104,	0,
#Partially deleted in new
chr11	114530642	114554393	chr11:114530642-114554393	0	-	114530642	114551201	789624	5	266,109,59,29,80,	0,20460,20740,22209,23671,
#Partially deleted in new
chr11	114570590	114595750	chr11:114570590-114595750	1	-	114570937	114581764	789624	6	883,207,62,270,106,159,	0,9541,11134,12161,24073,25001,
#Partially deleted in new
chr11	114570931	114595762	chr11:114570931-114595762	3	-	114570937	114594759	789624	6	542,207,62,734,106,171,	0,9200,10793,11356,23732,24660,
#Deleted in new
chr11	114583252	114584692	chr11:114583252-114584692	7	+	114583252	114583252	16724991	1	1440,	0,
#Partially deleted in new
chr11	114678385	114706933	chr11:114678385-114706933	3	+	114678575	114706930	789624	6	216,106,734,62,216,539,	0,1271,19659,25605,27395,28009,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	115128217	115128373	chr11:115128217-115128373	3	-	115128217	115128217	8553170	1	156,	0,
#Partially deleted in new
chr11	115169217	115198440	chr11:115169217-115198440	0	-	115169217	115169217	8553170	4	409,132,54,35,	0,9426,21670,29188,
#Partially deleted in new
chr11	115169235	115504415	chr11:115169235-115504415	1	-	115176473	115504394	0	10	7357,132,84,173,100,159,138,153,147,145,	0,9408,40338,45372,48656,59877,62117,69264,71038,335035,
#Partially deleted in new
chr11	115169235	115504523	chr11:115169235-115504523	0	-	115169235	115169235	8553170	9	391,132,173,100,159,138,153,147,253,	0,9408,45372,48656,59877,62117,69264,71038,335035,
#Partially deleted in new
chr11	115169588	115240422	chr11:115169588-115240422	1	-	115169588	115240421	789624	8	38,132,173,100,159,138,153,149,	0,9055,45019,48303,59524,61764,68911,70685,
#Partially deleted in new
chr11	115173624	115504523	chr11:115173624-115504523	3	-	115176473	115504394	0	9	2968,132,173,100,159,138,153,147,253,	0,5019,40983,44267,55488,57728,64875,66649,330646,
#Partially deleted in new
chr11	115174306	115504415	chr11:115174306-115504415	1	-	115176473	115504394	789624	11	2286,132,54,33,173,100,159,138,153,147,145,	0,4337,16581,24099,40301,43585,54806,57046,64193,65967,329964,
#Partially deleted in new
chr11	115174306	115504415	chr11:115174306-115504415	1	-	115176473	115504394	0	11	2286,132,33,84,173,100,159,138,153,147,145,	0,4337,24099,35267,40301,43585,54806,57046,64193,65967,329964,
#Partially deleted in new
chr11	115175340	115504389	chr11:115175340-115504389	0	-	115176473	115504389	789624	9	1252,132,173,100,159,138,153,147,119,	0,3303,39267,42551,53772,56012,63159,64933,328930,
#Partially deleted in new
chr11	115176294	115504565	chr11:115176294-115504565	1	-	115176473	115504394	0	12	298,132,54,33,84,173,100,159,138,153,147,295,	0,2349,14593,22111,33279,38313,41597,52818,55058,62205,63979,327976,
#Deleted in new
chr11	115176326	115179111	chr11:115176326-115179111	0	-	115176326	115176326	8553170	2	266,468,	0,2317,
#Partially deleted in new
chr11	115176329	115194110	chr11:115176329-115194110	0	-	115176329	115176329	8553170	3	263,132,273,	0,2314,17508,
#Partially deleted in new
chr11	115176407	115191046	chr11:115176407-115191046	0	-	115176407	115176407	8553170	3	185,132,159,	0,2236,14480,
#Partially deleted in new
chr11	115176466	115240421	chr11:115176466-115240421	1	-	115176473	115240421	789624	10	126,132,33,84,173,100,159,138,153,148,	0,2177,21939,33107,38141,41425,52646,54886,62033,63807,
#Partially deleted in new
chr11	115190608	115214694	chr11:115190608-115214694	0	-	115190608	115190608	8553170	5	333,33,6,84,87,	0,7797,16693,18965,23999,
#Partially deleted in new
chr11	115214489	115504394	chr11:115214489-115504394	0	-	115214489	115214489	8553170	7	291,100,159,138,153,147,124,	0,3402,14623,16863,24010,25784,289781,
#Deleted in new
chr11	115214698	115218144	chr11:115214698-115218144	0	-	115214698	115214698	8553170	2	82,253,	0,3193,
#Partially deleted in new
chr11	115217939	115240980	chr11:115217939-115240980	0	-	115217939	115231473	789624	6	52,159,138,153,147,184,	0,11173,13413,20560,22334,22857,
#Partially deleted in new
chr11	115229155	115287477	chr11:115229155-115287477	0	-	115229155	115231473	789624	5	116,138,153,147,75,	0,2197,9344,11118,58247,
#Partially deleted in new
chr11	115229188	115256891	chr11:115229188-115256891	0	-	115229188	115256856	789624	5	83,138,153,147,60,	0,2164,9311,11085,27643,
#Partially deleted in new
chr11	115229219	115504957	chr11:115229219-115504957	0	-	115229219	115504957	789624	5	52,138,153,147,75,	0,2133,9280,11054,275663,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	115231439	115504415	chr11:115231439-115504415	0	-	115240416	115504394	789624	5	51,153,147,76,145,	0,7060,8834,214321,272831,
#Partially deleted in new
chr11	115333576	115340262	chr11:115333576-115340262	3	+	115333576	115333576	789624	2	42,288,	0,6398,
#Partially deleted in new
chr11	115363628	115377931	chr11:115363628-115377931	3	+	115363628	115363628	8553170	2	68,750,	0,13553,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	115396755	115397658	chr11:115396755-115397658	0	+	115396755	115396755	789624	2	136,390,	0,513,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	115396850	115397619	chr11:115396850-115397619	3	+	115396850	115396850	8553170	2	678,37,	0,732,
#Partially deleted in new
chr11	115399083	115504415	chr11:115399083-115504415	0	-	115399083	115399083	8553170	2	430,145,	0,105187,
#Partially deleted in new
chr11	115532321	115532953	chr11:115532321-115532953	3	-	115532321	115532321	8553170	2	260,34,	0,598,
#Deleted in new
chr11	115538868	115539384	chr11:115538868-115539384	7	-	115538868	115538868	16724991	1	516,	0,
#Deleted in new
chr11	115578048	115578243	chr11:115578048-115578243	7	+	115578048	115578048	16724991	1	195,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	115582296	115600339	chr11:115582296-115600339	3	+	115582296	115582296	8553170	3	213,44,119,	0,10854,17924,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	115627081	115627185	chr11:115627081-115627185	3	-	115627081	115627081	8553170	1	104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	115638562	115646962	chr11:115638562-115646962	3	+	115638562	115638562	8553170	1	8400,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	115659167	115661417	chr11:115659167-115661417	3	+	115659167	115659167	8553170	1	2250,	0,
#Partially deleted in new
chr11	115659657	115843146	chr11:115659657-115843146	3	+	115659657	115659657	8553170	3	67,96,411,	0,17028,183078,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	115731941	115734742	chr11:115731941-115734742	3	-	115731941	115731941	789624	1	2801,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	115754247	115760194	chr11:115754247-115760194	3	-	115754247	115754247	789624	3	3045,112,165,	0,3893,5782,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	115757450	115760627	chr11:115757450-115760627	1	-	115757450	115757450	8553170	3	802,100,80,	0,1356,3097,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	115757462	115760197	chr11:115757462-115760197	0	-	115757462	115757462	8553170	2	790,205,	0,2530,
#Deleted in new
chr11	115757716	115760186	chr11:115757716-115760186	0	-	115757716	115757716	8553170	2	536,157,	0,2313,
#Deleted in new
chr11	115757919	115760200	chr11:115757919-115760200	0	-	115757919	115757919	8553170	2	333,171,	0,2110,
#Deleted in new
chr11	115758275	115758853	chr11:115758275-115758853	0	-	115758275	115758275	8553170	1	578,	0,
#Partially deleted in new
chr11	115932773	115942995	chr11:115932773-115942995	3	+	115932773	115932773	8553170	4	190,103,170,85,	0,1474,8784,10137,
#Partially deleted in new
chr11	115932856	115940210	chr11:115932856-115940210	0	+	115932856	115932856	8553170	3	107,103,93,	0,1391,7261,
#Deleted in new
chr11	115950195	115950801	chr11:115950195-115950801	7	-	115950195	115950195	16724991	1	606,	0,
#Deleted in new
chr11	115951104	115951491	chr11:115951104-115951491	7	-	115951104	115951104	16724991	1	387,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	116496898	116500630	chr11:116496898-116500630	3	-	116496898	116496898	8553170	2	832,89,	0,3643,
#Deleted in new
chr11	116609994	116610094	chr11:116609994-116610094	3	-	116609994	116609994	8553170	1	100,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	116639421	116658252	chr11:116639421-116658252	3	+	116639421	116639421	789624	3	116,156,311,	0,13476,18520,
#Partially deleted in new
chr11	116639479	116655189	chr11:116639479-116655189	0	+	116639479	116639479	8553170	3	58,156,155,	0,13418,15555,
#Partially deleted in new
chr11	116748169	116772988	chr11:116748169-116772988	3	-	116748481	116772964	789624	10	406,82,185,139,106,218,714,85,94,167,	0,8976,9596,10099,10904,12565,14383,17192,21959,24652,
#Partially deleted in new
chr11	116748169	116772987	chr11:116748169-116772987	1	-	116748481	116772964	789624	10	406,82,185,139,106,218,312,85,94,166,	0,8976,9596,10099,10904,12565,14785,17192,21959,24652,
#Partially deleted in new
chr11	116748169	116762836	chr11:116748169-116762836	0	-	116757869	116762836	789624	4	406,82,175,284,	0,8976,9596,14383,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	116773388	116774205	chr11:116773388-116774205	3	+	116773388	116773388	8553170	2	123,296,	0,521,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr11	116773798	116788050	chr11:116773798-116788050	3	-	116778924	116787990	789624	14	5261,66,87,111,90,71,67,48,123,87,71,91,162,231,	0,5973,8359,9120,9731,10579,11056,11300,11715,11997,12712,13170,13683,14021,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	116775109	116775876	chr11:116775109-116775876	0	-	116775109	116775109	8553170	2	224,374,	0,393,
#Partially deleted in new
chr11	116777719	116787979	chr11:116777719-116787979	0	-	116778924	116787979	789624	12	1340,66,87,111,90,71,67,123,87,71,91,160,	0,2052,4438,5199,5810,6658,7135,7794,8076,8791,9249,10100,
#Partially deleted in new
chr11	116777719	116787989	chr11:116777719-116787989	0	-	116778924	116787989	789624	13	1340,66,111,90,71,67,48,123,87,71,91,162,170,	0,2052,5199,5810,6658,7135,7379,7794,8076,8791,9249,9762,10100,
#Deleted in new
chr11	116782157	116785843	chr11:116782157-116785843	0	-	116784471	116785843	789624	8	87,111,90,121,63,48,123,48,	0,761,1372,2220,2701,2941,3356,3638,
#Partially deleted in new
chr11	116785577	116787898	chr11:116785577-116787898	0	-	116787030	116787898	789624	6	59,87,71,91,121,79,	0,218,933,1391,1904,2242,
#Partially deleted in new
chr11	116785795	116788039	chr11:116785795-116788039	0	-	116787636	116787990	789624	5	87,71,91,162,192,	0,715,1173,1686,2052,
#Partially deleted in new
chr11	116786524	116787336	chr11:116786524-116787336	0	-	116786524	116786524	8553170	2	57,368,	0,444,
#Deleted in new
chr11	116787011	116787987	chr11:116787011-116787987	0	-	116787011	116787011	8553170	2	48,506,	0,470,
#Deleted in new
chr11	116789366	116791895	chr11:116789366-116791895	1	-	116790127	116791860	789624	3	1701,112,84,	0,2219,2445,
#Deleted in new
chr11	116789372	116792420	chr11:116789372-116792420	3	-	116790127	116791860	789624	4	1695,112,81,41,	0,2213,2439,3007,
#Deleted in new
chr11	116790742	116792411	chr11:116790742-116792411	0	-	116790742	116791860	789624	4	325,112,57,32,	0,843,1069,1637,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	116813203	116814003	chr11:116813203-116814003	3	-	116813203	116813203	8553170	2	245,88,	0,712,
#Deleted in new
chr11	116820644	116821541	chr11:116820644-116821541	3	+	116820644	116820644	8553170	2	168,522,	0,375,
#Deleted in new
chr11	116820699	116823306	chr11:116820699-116823306	3	-	116820866	116823191	789624	3	1182,127,164,	0,1959,2443,
#Deleted in new
chr11	116829705	116830882	chr11:116829705-116830882	0	+	116830582	116830882	789624	3	181,68,110,	0,864,1067,
#Partially deleted in new
chr11	116829891	116833072	chr11:116829891-116833072	3	+	116830582	116832884	0	4	49,68,124,309,	0,678,881,2872,
#Partially deleted in new
chr11	116829914	116833072	chr11:116829914-116833072	1	+	116830528	116832884	789624	4	26,145,124,309,	0,578,858,2849,
#Deleted in new
chr11	116829921	116831100	chr11:116829921-116831100	0	+	116829921	116829921	8553170	4	19,68,124,58,	0,648,851,1121,
#Partially deleted in new
chr11	116830528	116833071	chr11:116830528-116833071	1	+	116830528	116832884	789624	3	109,124,308,	0,244,2235,
#Deleted in new
chr11	116835750	116837950	chr11:116835750-116837950	3	-	116835807	116837387	0	4	661,157,63,346,	0,1250,1594,1854,
#Deleted in new
chr11	116835750	116837609	chr11:116835750-116837609	1	-	116835807	116837387	0	4	661,157,63,51,	0,1250,1594,1808,
#Deleted in new
chr11	116835750	116837586	chr11:116835750-116837586	1	-	116835807	116837387	0	4	661,157,63,59,	0,1250,1594,1777,
#Deleted in new
chr11	116835750	116837614	chr11:116835750-116837614	1	-	116835807	116837387	0	3	661,157,270,	0,1250,1594,
#Deleted in new
chr11	116835750	116837610	chr11:116835750-116837610	1	-	116835807	116837478	789624	2	661,266,	0,1594,
#Partially deleted in new
chr11	116836116	116855729	chr11:116836116-116855729	3	+	116836116	116836116	789624	2	123,440,	0,19173,
#Partially deleted in new
chr11	116843401	117098421	chr11:116843401-117098421	3	-	116846395	117098415	789624	24	2228,171,133,164,890,340,110,86,126,151,71,156,154,110,78,144,111,119,124,125,162,64,117,279,	0,2981,4074,5718,14408,15863,17872,18439,18800,20266,26929,30079,30501,31756,31972,32464,32851,33522,52851,53791,83817,110642,113546,254741,
#Partially deleted in new
chr11	116843401	117098395	chr11:116843401-117098395	0	-	116846395	117098395	789624	25	2228,171,133,164,890,340,110,86,126,151,144,71,156,154,110,78,144,111,119,124,125,162,64,117,253,	0,2981,4074,5718,14408,15863,17872,18439,18800,20266,24544,26929,30079,30501,31756,31972,32464,32851,33522,52851,53791,83817,110642,113546,254741,
#Partially deleted in new
chr11	116843401	116870251	chr11:116843401-116870251	0	-	116843401	116843401	8553170	10	2228,171,133,164,710,340,86,126,151,111,	0,2981,4074,5718,14408,15863,18439,18800,20266,26739,
#Partially deleted in new
chr11	116845183	116849138	chr11:116845183-116849138	0	-	116846395	116849138	789624	4	67,75,133,19,	0,1199,2292,3936,
#Partially deleted in new
chr11	116845411	116865068	chr11:116845411-116865068	0	-	116845411	116845411	8553170	10	218,171,133,164,710,340,110,86,126,1401,	0,971,2064,3708,12398,13853,15862,16429,16790,18256,
#Partially deleted in new
chr11	116845592	117098271	chr11:116845592-117098271	0	-	116927358	117098271	789624	25	37,171,133,164,710,340,110,86,126,151,71,156,154,110,78,144,111,119,124,125,162,124,64,117,129,	0,790,1883,3527,12217,13672,15681,16248,16609,18075,24738,27888,28310,29565,29781,30273,30660,31331,50660,51600,81626,104540,108451,111355,252550,
#Partially deleted in new
chr11	116845592	117098437	chr11:116845592-117098437	1	-	116846395	117098415	789624	24	37,171,133,164,710,340,110,86,126,151,144,71,156,154,110,78,111,119,124,125,162,64,117,295,	0,790,1883,3527,12217,13672,15681,16248,16609,18075,22353,24738,27888,28310,29565,29781,30660,31331,50660,51600,81626,108451,111355,252550,
#Partially deleted in new
chr11	116856913	116861384	chr11:116856913-116861384	0	-	116856913	116856913	8553170	3	1786,340,111,	0,2351,4360,
#Partially deleted in new
chr11	116867687	116873672	chr11:116867687-116873672	0	-	116867687	116867687	8553170	3	402,71,192,	0,2643,5793,
#Partially deleted in new
chr11	116868791	116957044	chr11:116868791-116957044	0	-	116870326	116957044	789624	13	1610,156,154,110,78,144,111,119,124,125,162,64,97,	0,4689,5111,6366,6582,7074,7461,8132,27461,28401,58427,85252,88156,
#Deleted in new
chr11	116874039	116875513	chr11:116874039-116875513	0	-	116874039	116874039	8553170	3	17,110,140,	0,1118,1334,
#Partially deleted in new
chr11	116893844	116957064	chr11:116893844-116957064	0	-	116893844	116893844	8553170	6	123,124,125,162,64,117,	0,2408,3348,33374,60199,63103,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	116904745	117098305	chr11:116904745-117098305	0	-	116904745	116904745	8553170	5	258,162,64,117,163,	0,22473,49298,52202,193397,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	117015896	117015992	chr11:117015896-117015992	3	+	117015896	117015896	8553170	1	96,	0,
#Deleted in new
chr11	117035796	117036051	chr11:117035796-117036051	7	-	117035796	117035796	16724991	1	255,	0,
#Partially deleted in new
chr11	117098986	117108170	chr11:117098986-117108170	3	+	117098986	117098986	8553170	3	164,95,224,	0,4237,8960,
#Partially deleted in new
chr11	117117793	117119181	chr11:117117793-117119181	7	-	117117793	117117793	16724991	3	349,188,144,	0,723,1244,
#Partially deleted in new
chr11	117135527	117138582	chr11:117135527-117138582	7	+	117135527	117135527	16724991	5	159,95,94,118,356,	0,991,1895,2257,2699,
#Deleted in new
chr11	117143890	117144191	chr11:117143890-117144191	7	-	117143890	117143890	16724991	1	301,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	117144266	117171048	chr11:117144266-117171048	3	+	117152447	117167699	0	6	152,88,90,117,123,3628,	0,8174,15667,16878,19503,23154,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	117144283	117176874	chr11:117144283-117176874	1	+	117152447	117174898	0	6	135,88,90,117,105,1982,	0,8157,15650,16861,19486,30609,
#Partially deleted in new
chr11	117144292	117167992	chr11:117144292-117167992	0	+	117144292	117167699	789624	3	126,123,572,	0,19477,23128,
#Partially deleted in new
chr11	117144297	117176422	chr11:117144297-117176422	1	+	117152447	117175962	0	6	121,88,90,117,123,517,	0,8143,15636,16847,19472,31608,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	117144308	117176894	chr11:117144308-117176894	0	+	117144308	117144308	8553170	2	110,989,	0,31597,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	117144343	117176137	chr11:117144343-117176137	1	+	117152447	117175978	0	7	75,88,90,117,123,125,232,	0,8097,15590,16801,19426,27278,31562,
#Partially deleted in new
chr11	117144381	117164122	chr11:117144381-117164122	0	+	117144381	117144381	8553170	5	37,88,90,117,353,	0,8059,15552,16763,19388,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	117159386	117161263	chr11:117159386-117161263	0	+	117159386	117159386	8553170	2	637,119,	0,1758,
#Partially deleted in new
chr11	117178732	117197442	chr11:117178732-117197442	3	+	117179263	117196066	789624	26	714,122,165,46,102,84,100,66,94,53,72,72,119,74,67,74,124,118,137,109,77,47,106,111,114,1439,	0,2683,3074,3327,3786,3990,5046,5341,7397,7851,8645,8895,9975,10436,10602,11219,11433,11890,13145,13521,13841,14087,14420,15120,17069,17271,
#Partially deleted in new
chr11	117178735	117181831	chr11:117178735-117181831	0	+	117179263	117181831	789624	4	90,303,122,25,	0,408,2680,3071,
#Partially deleted in new
chr11	117178931	117197441	chr11:117178931-117197441	1	+	117179263	117196066	789624	27	10,223,122,165,46,102,84,100,66,94,53,72,72,119,74,67,74,124,118,137,109,77,47,106,111,114,1438,	0,292,2484,2875,3128,3587,3791,4847,5142,7198,7652,8446,8696,9776,10237,10403,11020,11234,11691,12946,13322,13642,13888,14221,14921,16870,17072,
#Partially deleted in new
chr11	117179180	117197444	chr11:117179180-117197444	0	+	117179263	117195984	789624	27	266,122,165,46,102,84,100,66,94,53,72,72,63,119,74,67,74,124,118,137,109,77,47,106,111,235,432,	0,2235,2626,2879,3338,3542,4598,4893,6949,7403,8197,8447,8711,9527,9988,10154,10771,10985,11442,12697,13073,13393,13639,13972,14672,16621,17832,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	117179180	117191692	chr11:117179180-117191692	0	+	117179180	117179180	8553170	2	209,173,	0,12339,
#Partially deleted in new
chr11	117179222	117197445	chr11:117179222-117197445	1	+	117179263	117196066	789624	27	224,122,165,46,102,84,100,66,94,53,12,72,72,98,74,67,74,124,118,137,109,77,47,106,111,114,1442,	0,2193,2584,2837,3296,3500,4556,4851,6907,7361,7767,8155,8405,9506,9946,10112,10729,10943,11400,12655,13031,13351,13597,13930,14630,16579,16781,
#Partially deleted in new
chr11	117179222	117195984	chr11:117179222-117195984	1	+	117179263	117195984	789624	26	224,122,165,46,102,84,100,66,94,53,72,72,63,119,74,67,74,124,118,137,109,77,47,106,111,183,	0,2193,2584,2837,3296,3500,4556,4851,6907,7361,8155,8405,8669,9485,9946,10112,10729,10943,11400,12655,13031,13351,13597,13930,14630,16579,
#Partially deleted in new
chr11	117179368	117186223	chr11:117179368-117186223	0	+	117181951	117186223	789624	9	78,99,165,46,102,84,100,66,94,	0,2047,2438,2691,3150,3354,4410,4705,6761,
#Partially deleted in new
chr11	117179687	117182598	chr11:117179687-117182598	0	+	117181535	117182598	789624	5	174,118,165,46,80,	0,1732,2119,2372,2831,
#Deleted in new
chr11	117181443	117182540	chr11:117181443-117182540	0	+	117181443	117181443	8553170	3	528,46,22,	0,616,1075,
#Partially deleted in new
chr11	117181463	117184139	chr11:117181463-117184139	0	+	117181463	117181463	8553170	6	51,165,102,84,100,66,	0,343,1055,1259,2315,2610,
#Partially deleted in new
chr11	117182097	117184090	chr11:117182097-117184090	0	+	117182097	117182097	8553170	4	523,84,100,17,	0,625,1681,1976,
#Partially deleted in new
chr11	117185950	117192613	chr11:117185950-117192613	0	+	117185950	117185950	8553170	12	273,53,72,72,119,74,67,124,118,137,109,40,	0,633,1427,1677,2757,3218,3384,4215,4672,5927,6303,6623,
#Partially deleted in new
chr11	117187626	117191929	chr11:117187626-117191929	0	+	117187626	117187626	8553170	6	1200,74,691,124,118,52,	0,1542,1708,2539,2996,4251,
#Deleted in new
chr11	117188990	117189439	chr11:117188990-117189439	0	+	117188990	117188990	8553170	2	252,105,	0,344,
#Deleted in new
chr11	117189024	117190282	chr11:117189024-117190282	0	+	117189024	117189024	8553170	4	218,67,74,117,	0,310,927,1141,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	117190682	117194151	chr11:117190682-117194151	0	+	117190682	117190682	8553170	7	58,137,109,77,47,106,299,	0,1195,1571,1891,2137,2470,3170,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	117190727	117193005	chr11:117190727-117193005	0	+	117190727	117190727	8553170	3	1287,109,432,	0,1526,1846,
#Partially deleted in new
chr11	117192578	117196504	chr11:117192578-117196504	0	+	117192578	117196066	789624	5	72,47,106,114,501,	0,241,574,3223,3425,
#Partially deleted in new
chr11	117192616	117197279	chr11:117192616-117197279	1	+	117193171	117196066	789624	4	642,111,114,1276,	0,1236,3185,3387,
#Partially deleted in new
chr11	117199320	117204557	chr11:117199320-117204557	1	+	117203013	117204359	789624	5	112,192,178,103,343,	0,3681,3986,4461,4894,
#Partially deleted in new
chr11	117199381	117204541	chr11:117199381-117204541	0	+	117203013	117204359	789624	6	51,197,192,178,103,327,	0,251,3620,3925,4400,4833,
#Partially deleted in new
chr11	117199393	117204782	chr11:117199393-117204782	2	+	117203013	117204359	789624	5	436,192,178,103,568,	0,3608,3913,4388,4821,
#Partially deleted in new
chr11	117200254	117203401	chr11:117200254-117203401	0	+	117203013	117203401	789624	3	88,192,95,	0,2747,3052,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	117201165	117204760	chr11:117201165-117204760	0	+	117201165	117201165	8553170	2	2319,979,	0,2616,
#Partially deleted in new
chr11	117201749	117204776	chr11:117201749-117204776	1	+	117203013	117204359	789624	5	192,192,178,103,562,	0,1252,1557,2032,2465,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	117201872	117204778	chr11:117201872-117204778	1	+	117203013	117204359	789624	4	1321,178,103,564,	0,1434,1909,2342,
#Deleted in new
chr11	117203143	117204405	chr11:117203143-117204405	0	+	117203143	117204359	789624	4	29,178,103,191,	0,163,638,1071,
#Partially deleted in new
chr11	117204336	117232525	chr11:117204336-117232525	3	-	117205996	117229844	789624	17	2020,118,94,95,157,103,108,168,101,139,55,91,166,135,480,120,499,	0,2344,2730,3633,4560,14129,14720,15254,18871,19741,20364,21594,22820,23879,25040,26012,27690,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	117204966	117210292	chr11:117204966-117210292	3	+	117204966	117204966	8553170	1	5326,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	117205073	117226876	chr11:117205073-117226876	0	-	117205073	117205073	8553170	11	1283,118,94,82,95,157,103,108,168,1009,2176,	0,1607,1993,2580,2896,3823,13392,13983,14517,18134,19627,
#Partially deleted in new
chr11	117205077	117232095	chr11:117205077-117232095	1	-	117206756	117229844	789624	16	1279,118,43,157,103,108,168,101,139,55,91,166,135,480,120,69,	0,1603,1989,3819,13388,13979,14513,18130,19000,19623,20853,22079,23138,24299,25271,26949,
#Deleted in new
chr11	117205946	117208136	chr11:117205946-117208136	0	-	117205946	117205946	8553170	3	410,118,167,	0,734,2023,
#Partially deleted in new
chr11	117206147	117220138	chr11:117206147-117220138	0	-	117206147	117206147	8553170	6	209,118,94,95,157,1673,	0,533,919,1822,2749,12318,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	117206679	117208681	chr11:117206679-117208681	0	-	117206679	117206679	8553170	3	119,94,712,	0,387,1290,
#Partially deleted in new
chr11	117206773	117209365	chr11:117206773-117209365	0	-	117206773	117206773	8553170	3	25,95,469,	0,1196,2123,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	117207692	117208488	chr11:117207692-117208488	0	-	117207692	117207692	8553170	2	43,519,	0,277,
#Partially deleted in new
chr11	117207774	117219165	chr11:117207774-117219165	0	-	117207774	117207774	8553170	5	92,95,150,103,109,	0,195,1122,10691,11282,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	117208672	117218464	chr11:117208672-117218464	0	-	117208672	117208672	8553170	2	64,9283,	0,509,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	117219123	117223063	chr11:117219123-117223063	0	-	117219123	117219123	8553170	3	41,168,2745,	0,467,1195,
#Partially deleted in new
chr11	117224699	117230240	chr11:117224699-117230240	0	-	117224699	117229844	789624	5	56,91,166,135,864,	0,1231,2457,3516,4677,
#Deleted in new
chr11	117229505	117231868	chr11:117229505-117231868	0	-	117229505	117229844	789624	3	351,120,82,	0,843,2281,
#Deleted in new
chr11	117229566	117232074	chr11:117229566-117232074	0	-	117229566	117229844	789624	4	290,120,91,48,	0,782,1560,2460,
#Deleted in new
chr11	117229569	117232525	chr11:117229569-117232525	0	-	117229569	117229844	789624	3	287,120,176,	0,779,2780,
#Partially deleted in new
chr11	117232624	117285686	chr11:117232624-117285686	3	+	117234272	117285151	789624	15	102,113,511,60,141,140,97,89,91,99,377,133,105,96,601,	0,1642,5976,7176,11820,14184,47283,47546,48689,48975,49269,49779,50121,50490,52461,
#Partially deleted in new
chr11	117232624	117238933	chr11:117232624-117238933	0	+	117234272	117238933	789624	3	102,113,333,	0,1642,5976,
#Partially deleted in new
chr11	117232702	117246840	chr11:117232702-117246840	0	+	117232702	117232702	8553170	5	24,113,1260,141,32,	0,1564,5898,11742,14106,
#Partially deleted in new
chr11	117232735	117285164	chr11:117232735-117285164	1	+	117234272	117285151	789624	15	40,113,46,60,141,140,97,89,91,99,377,133,105,96,79,	0,1531,5865,7065,11709,14073,47172,47435,48578,48864,49158,49668,50010,50379,52350,
#Partially deleted in new
chr11	117232735	117285688	chr11:117232735-117285688	1	+	117234272	117285151	789624	15	40,113,511,60,141,140,97,89,91,99,377,133,105,96,603,	0,1531,5865,7065,11709,14073,47172,47435,48578,48864,49158,49668,50010,50379,52350,
#Partially deleted in new
chr11	117234262	117286445	chr11:117234262-117286445	1	+	117234272	117285151	789624	13	117,46,60,141,140,97,89,91,99,377,133,96,1360,	0,4338,5538,10182,12546,45645,45908,47051,47337,47631,48141,48852,50823,
#Partially deleted in new
chr11	117263798	117263952	chr11:117263798-117263952	3	+	117263798	117263798	8553170	1	154,	0,
#Deleted in new
chr11	117281427	117283204	chr11:117281427-117283204	0	+	117281427	117281427	8553170	7	45,99,18,55,133,105,90,	0,172,466,788,976,1318,1687,
#Partially deleted in new
chr11	117281787	117285246	chr11:117281787-117285246	0	+	117281787	117281787	8553170	5	483,133,105,96,161,	0,616,958,1327,3298,
#Partially deleted in new
chr11	117285206	117316256	chr11:117285206-117316256	3	-	117289565	117315795	0	9	4601,172,150,102,135,138,217,89,722,	0,5281,5693,6505,7847,8664,9924,11666,30328,
#Partially deleted in new
chr11	117285705	117295636	chr11:117285705-117295636	1	-	117289565	117295547	0	8	4102,172,150,102,135,138,217,139,	0,4782,5194,6006,7348,8165,9425,9792,
#Partially deleted in new
chr11	117287350	117316259	chr11:117287350-117316259	1	-	117289565	117315795	789624	8	2457,172,150,135,138,217,89,725,	0,3137,3549,5703,6520,7780,9522,28184,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	117288452	117293475	chr11:117288452-117293475	0	+	117288452	117288452	8553170	2	3319,1265,	0,3758,
#Partially deleted in new
chr11	117289486	117295573	chr11:117289486-117295573	1	-	117289565	117295547	0	8	321,172,150,102,135,63,217,76,	0,1001,1413,2225,3567,4384,5644,6011,
#Partially deleted in new
chr11	117289534	117315798	chr11:117289534-117315798	1	-	117289565	117315795	0	9	273,172,150,102,135,63,85,89,264,	0,953,1365,2177,3519,4336,5728,7338,26000,
#Partially deleted in new
chr11	117289534	117315798	chr11:117289534-117315798	1	-	117289565	117315795	0	9	273,172,150,102,135,138,85,89,264,	0,953,1365,2177,3519,4336,5728,7338,26000,
#Partially deleted in new
chr11	117289534	117315798	chr11:117289534-117315798	1	-	117289565	117315795	0	9	273,172,150,102,135,63,217,89,264,	0,953,1365,2177,3519,4336,5596,7338,26000,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	117290502	117291997	chr11:117290502-117291997	0	-	117290502	117290502	8553170	3	157,150,286,	0,397,1209,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	117290633	117294441	chr11:117290633-117294441	0	-	117290633	117290633	8553170	5	26,150,102,135,571,	0,266,1078,2420,3237,
#Partially deleted in new
chr11	117291798	117295485	chr11:117291798-117295485	0	-	117291798	117293873	789624	5	15,135,138,217,56,	0,1255,2072,3332,3631,
#Deleted in new
chr11	117292797	117293571	chr11:117292797-117293571	1	+	117292797	117292797	8553170	1	774,	0,
#Partially deleted in new
chr11	117293070	117299696	chr11:117293070-117299696	0	-	117293070	117293873	789624	5	118,138,217,89,49,	0,800,2060,3802,6577,
#Partially deleted in new
chr11	117293870	117315795	chr11:117293870-117315795	0	-	117293870	117293870	8553170	4	138,29,89,261,	0,1448,3002,21664,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	117297004	117297328	chr11:117297004-117297328	3	-	117297004	117297004	8553170	1	324,	0,
#Partially deleted in new
chr11	117314556	117351942	chr11:117314556-117351942	0	+	117338586	117351942	789624	5	172,76,103,112,153,	0,21048,24009,29609,37233,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	117316361	117328038	chr11:117316361-117328038	3	-	117316361	117316361	8553170	3	147,139,202,	0,7508,11475,
#Partially deleted in new
chr11	117327849	117362463	chr11:117327849-117362463	0	+	117344221	117362463	789624	5	55,112,199,159,60,	0,16316,23940,33985,34554,
#Partially deleted in new
chr11	117327854	117413268	chr11:117327854-117413268	3	+	117338586	117412168	789624	33	50,76,103,112,199,159,135,78,387,81,84,92,168,147,210,132,217,78,132,123,144,84,69,176,127,62,223,108,139,348,67,123,1197,	0,7750,10711,16311,23935,33980,34549,35574,43225,45896,47853,52759,53846,54941,59348,62922,63144,64371,64641,65149,66495,67065,67268,67692,68199,68695,69236,80070,81035,81763,82973,83940,84217,
#Partially deleted in new
chr11	117327928	117361945	chr11:117327928-117361945	0	+	117344221	117361945	789624	5	280,76,112,199,111,	0,7676,16237,23861,33906,
#Partially deleted in new
chr11	117328084	117351959	chr11:117328084-117351959	0	+	117338586	117351959	789624	5	124,76,103,112,170,	0,7520,10481,16081,23705,
#Partially deleted in new
chr11	117328102	117351960	chr11:117328102-117351960	0	+	117338586	117351960	789624	4	106,103,112,171,	0,10463,16063,23687,
#Partially deleted in new
chr11	117336255	117336631	chr11:117336255-117336631	7	-	117336255	117336255	16724991	1	376,	0,
#Partially deleted in new
chr11	117351789	117362538	chr11:117351789-117362538	0	+	117351789	117362538	789624	4	199,1686,159,135,	0,3142,10045,10614,
#Partially deleted in new
chr11	117355978	117412343	chr11:117355978-117412343	0	+	117355978	117355978	8553170	27	639,159,135,78,387,81,84,101,168,210,132,217,78,132,123,144,272,176,127,62,223,108,115,348,67,123,272,	0,5856,6425,7450,15101,17772,19729,24635,25722,31224,34798,35020,36247,36517,37025,38371,38941,39568,40075,40571,41112,51946,52911,53639,54849,55816,56093,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr11	117363954	117413266	chr11:117363954-117413266	0	+	117363954	117363954	8553170	27	89,387,81,84,92,168,147,210,132,217,78,132,123,144,84,69,176,127,62,223,108,230,139,348,67,123,1195,	0,7125,9796,11753,16659,17746,18841,23248,26822,27044,28271,28541,29049,30395,30965,31168,31592,32099,32595,33136,43970,44571,44935,45663,46873,47840,48117,
#Partially deleted in new
chr11	117382731	117391058	chr11:117382731-117391058	0	+	117382731	117382731	8553170	4	173,210,132,60,	0,4471,8045,8267,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr11	117384596	117410701	chr11:117384596-117410701	0	+	117384596	117384596	8553170	16	2816,132,217,78,132,123,144,84,69,176,127,62,223,108,115,1084,	0,6180,6402,7629,7899,8407,9753,10323,10526,10950,11457,11953,12494,23328,24293,25021,
#Partially deleted in new
chr11	117409016	117412339	chr11:117409016-117412339	0	+	117409016	117409016	8553170	4	949,67,123,268,	0,1811,2778,3055,
#Partially deleted in new
chr11	117409811	117411864	chr11:117409811-117411864	0	+	117409811	117409811	8553170	3	154,67,437,	0,1016,1616,
#Deleted in new
chr11	117411111	117412830	chr11:117411111-117412830	0	+	117411111	117411111	8553170	2	806,759,	0,960,
#Partially deleted in new
chr11	117427772	117797261	chr11:117427772-117797261	3	-	117428327	117797259	789624	33	1031,312,195,153,119,31,156,288,189,99,164,118,154,140,156,147,241,71,168,129,97,200,177,120,279,273,297,276,279,147,147,318,228,	0,2949,3761,4579,5365,5668,7871,9349,10122,11112,11493,12046,16113,22776,30981,33677,37169,42137,44096,52670,53401,54190,76072,77151,77681,88694,90693,93357,97032,104603,349018,352720,369261,
#Partially deleted in new
chr11	117427772	117797091	chr11:117427772-117797091	1	-	117428327	117797079	789624	31	1031,312,195,153,119,31,156,288,189,99,164,118,154,140,156,147,241,71,168,129,97,200,177,120,279,273,297,276,205,56,58,	0,2949,3761,4579,5365,5668,7871,9349,10122,11112,11493,12046,16113,22776,30981,33677,37169,42137,44096,52670,53401,54190,76072,77151,77681,88694,90693,93357,97032,352982,369261,
#Deleted in new
chr11	117611100	117612017	chr11:117611100-117612017	3	-	117611100	117611100	8553170	1	917,	0,
#Deleted in new
chr11	117668482	117668858	chr11:117668482-117668858	3	+	117668482	117668482	8553170	1	376,	0,
#Partially deleted in new
chr11	117776808	117817525	chr11:117776808-117817525	0	-	117776808	117780561	789624	3	129,318,136,	0,3684,40581,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	117800843	117819419	chr11:117800843-117819419	0	-	117800843	117800843	8553170	2	1192,1680,	0,16896,
#Partially deleted in new
chr11	117801729	117828068	chr11:117801729-117828068	1	-	117820671	117828013	0	6	306,31,37,75,39,74,	0,18936,19129,20676,20949,26265,
#Partially deleted in new
chr11	117818442	117821992	chr11:117818442-117821992	3	+	117818442	117818442	8553170	3	276,261,20,	0,2018,3530,
#Partially deleted in new
chr11	117820069	117828698	chr11:117820069-117828698	1	-	117820671	117828013	0	7	303,31,37,75,39,114,73,	0,596,789,2336,2609,7925,8556,
#Partially deleted in new
chr11	117820074	117824744	chr11:117820074-117824744	3	-	117820671	117824678	0	6	298,31,37,75,39,91,	0,591,784,2331,2604,4579,
#Partially deleted in new
chr11	117820139	117828092	chr11:117820139-117828092	1	-	117820671	117828013	0	6	233,31,37,75,39,98,	0,526,719,2266,2539,7855,
#Partially deleted in new
chr11	117820146	117824744	chr11:117820146-117824744	0	-	117820146	117820146	8553170	6	226,31,37,75,39,583,	0,519,712,2259,2532,4015,
#Partially deleted in new
chr11	117820162	117876667	chr11:117820162-117876667	1	-	117820867	117842776	789624	10	210,31,37,39,50,50,75,39,63,76,	0,503,696,2516,19618,20156,21628,21827,22556,56429,
#Partially deleted in new
chr11	117820221	117876628	chr11:117820221-117876628	3	-	117820671	117842776	789624	11	151,31,37,75,39,50,37,75,39,63,37,	0,444,637,2184,2457,19559,20926,21569,21768,22497,56370,
#Partially deleted in new
chr11	117820559	117824740	chr11:117820559-117824740	0	-	117820559	117820559	8553170	5	137,37,75,39,87,	0,299,1846,2119,4094,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	117821241	117824744	chr11:117821241-117824744	0	-	117821241	117821241	8553170	2	1476,91,	0,3412,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	117833718	117837792	chr11:117833718-117837792	3	+	117833718	117833718	8553170	3	100,234,625,	0,2550,3449,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	117833892	117837655	chr11:117833892-117837655	1	+	117833892	117833892	8553170	3	169,234,488,	0,2376,3275,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	117833909	117838942	chr11:117833909-117838942	0	+	117833909	117833909	8553170	3	152,234,336,	0,2359,4697,
#Partially deleted in new
chr11	117836975	117877031	chr11:117836975-117877031	1	-	117839801	117842776	789624	9	1302,50,50,37,75,39,63,76,440,	0,2805,3343,4172,4815,5014,5743,21235,39616,
#Partially deleted in new
chr11	117836977	117876733	chr11:117836977-117876733	1	-	117839801	117842776	789624	10	1300,50,50,37,75,39,63,97,76,142,	0,2803,3341,4170,4813,5012,5741,7132,21233,39614,
#Partially deleted in new
chr11	117836980	117877486	chr11:117836980-117877486	3	-	117839801	117842776	789624	8	1297,50,50,37,75,39,63,188,	0,2800,3338,4167,4810,5009,5738,40318,
#Partially deleted in new
chr11	117837011	117877182	chr11:117837011-117877182	1	-	117839801	117842776	789624	8	1266,50,50,37,75,39,63,591,	0,2769,3307,4136,4779,4978,5707,39580,
#Partially deleted in new
chr11	117837850	117869190	chr11:117837850-117869190	1	-	117839801	117842776	789624	8	427,50,50,37,75,39,63,292,	0,1930,2468,3297,3940,4139,4868,31048,
#Partially deleted in new
chr11	117837945	117876664	chr11:117837945-117876664	1	-	117838263	117842776	789624	7	332,50,37,75,39,63,73,	0,1835,3202,3845,4044,4773,38646,
#Partially deleted in new
chr11	117837983	117876719	chr11:117837983-117876719	1	-	117838222	117842776	789624	8	294,50,25,37,75,36,63,128,	0,1797,2360,3164,3807,4006,4735,38608,
#Deleted in new
chr11	117837999	117842261	chr11:117837999-117842261	0	-	117837999	117837999	8553170	7	278,50,50,37,75,39,155,	0,1781,2319,3148,3791,3990,4107,
#Partially deleted in new
chr11	117838207	117876689	chr11:117838207-117876689	1	-	117839801	117842776	789624	9	70,50,50,37,75,39,63,97,98,	0,1573,2111,2940,3583,3782,4511,5902,38384,
#Deleted in new
chr11	117838207	117842261	chr11:117838207-117842261	0	-	117838207	117838207	8553170	6	70,50,50,37,75,272,	0,1573,2111,2940,3583,3782,
#Partially deleted in new
chr11	117838234	117877430	chr11:117838234-117877430	0	-	117840304	117842776	789624	8	43,50,132,37,75,39,63,132,	0,1546,2002,2913,3556,3755,4484,39064,
#Partially deleted in new
chr11	117839022	117876643	chr11:117839022-117876643	0	-	117839022	117839022	8553170	6	1346,37,75,39,63,52,	0,2125,2768,2967,3696,37569,
#Partially deleted in new
chr11	117839576	117876729	chr11:117839576-117876729	0	-	117839576	117839576	8553170	7	254,50,37,75,39,63,138,	0,742,1571,2214,2413,3142,37015,
#Partially deleted in new
chr11	117839780	117876733	chr11:117839780-117876733	0	-	117839780	117839780	8553170	8	50,50,37,75,39,63,76,142,	0,538,1367,2010,2209,2938,18430,36811,
#Partially deleted in new
chr11	117840147	117876625	chr11:117840147-117876625	1	-	117840304	117842776	789624	7	221,37,75,39,63,97,34,	0,1000,1643,1842,2571,3962,36444,
#Deleted in new
chr11	117841567	117842784	chr11:117841567-117842784	0	-	117841567	117841567	8553170	2	461,66,	0,1151,
#Partially deleted in new
chr11	117841989	117844107	chr11:117841989-117844107	0	-	117841989	117841989	8553170	3	39,63,448,	0,729,1670,
#Partially deleted in new
chr11	117900642	117929381	chr11:117900642-117929381	1	-	117902238	117929307	789624	12	1623,153,143,99,173,163,44,93,130,123,430,95,	0,3012,3316,4995,7969,9163,10064,11125,13134,13749,17766,28644,
#Partially deleted in new
chr11	117902050	117929365	chr11:117902050-117929365	3	-	117902238	117929307	789624	13	215,153,143,99,173,163,44,93,130,123,105,430,79,	0,1604,1908,3587,6561,7755,8656,9717,11726,12341,15119,16358,27236,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	117903041	117929395	chr11:117903041-117929395	1	-	117903436	117929307	789624	13	410,153,143,99,173,163,44,93,130,123,105,430,109,	0,613,917,2596,5570,6764,7665,8726,10735,11350,14128,15367,26245,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	117903044	117929381	chr11:117903044-117929381	1	-	117903570	117929307	789624	12	763,143,99,173,163,44,93,130,123,105,430,95,	0,914,2593,5567,6761,7662,8723,10732,11347,14125,15364,26242,
#Partially deleted in new
chr11	117907453	117929459	chr11:117907453-117929459	1	-	117908417	117929307	789624	9	1331,163,44,93,130,123,105,430,173,	0,2352,3253,4314,6323,6938,9716,10955,21833,
#Partially deleted in new
chr11	117910569	117929430	chr11:117910569-117929430	0	-	117914412	117929307	789624	4	181,130,123,144,	0,3207,3822,18717,
#Partially deleted in new
chr11	117917162	117929397	chr11:117917162-117929397	0	-	117917162	117917162	8553170	3	112,430,111,	0,1246,12124,
#Partially deleted in new
chr11	117986347	118001479	chr11:117986347-118001479	3	+	117986467	117999641	0	7	187,121,179,170,151,122,2765,	0,2034,3094,6893,7651,9241,12367,
#Partially deleted in new
chr11	117986369	117999798	chr11:117986369-117999798	0	+	117986369	117986369	8553170	7	444,121,179,170,151,122,1084,	0,2012,3072,6871,7629,9219,12345,
#Partially deleted in new
chr11	117986390	117999877	chr11:117986390-117999877	0	+	117986390	117986390	789624	8	144,130,121,179,170,151,122,1163,	0,293,1991,3051,6850,7608,9198,12324,
#Partially deleted in new
chr11	117986393	117999788	chr11:117986393-117999788	0	+	117986467	117993337	789624	6	141,121,170,151,122,1074,	0,1988,6847,7605,9195,12321,
#Partially deleted in new
chr11	117986393	117999898	chr11:117986393-117999898	0	+	117986467	117986806	789624	8	141,207,121,179,170,151,122,1184,	0,213,1988,3048,6847,7605,9195,12321,
#Partially deleted in new
chr11	117986440	117989693	chr11:117986440-117989693	0	+	117986440	117986440	8553170	3	94,121,252,	0,1941,3001,
#Partially deleted in new
chr11	117986736	118003037	chr11:117986736-118003037	0	+	117986736	117986736	8553170	6	1766,179,170,151,122,4323,	0,2705,6504,7262,8852,11978,
#Partially deleted in new
chr11	117989433	117993410	chr11:117989433-117993410	0	+	117989433	117989433	8553170	2	187,170,	0,3807,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	117993007	117998945	chr11:117993007-117998945	0	+	117993007	117993007	8553170	4	403,151,122,231,	0,991,2581,5707,
#Deleted in new
chr11	117993057	117994207	chr11:117993057-117994207	0	+	117993057	117993057	8553170	2	353,209,	0,941,
#Partially deleted in new
chr11	117994958	117999459	chr11:117994958-117999459	0	+	117994958	117994958	8553170	2	752,745,	0,3756,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	118003633	118088299	chr11:118003633-118088299	3	-	118013780	118086757	789624	7	2743,177,34,117,130,113,83,	0,10070,11074,12059,83117,83944,84583,
#Partially deleted in new
chr11	118015771	118086793	chr11:118015771-118086793	0	-	118015771	118015771	8553170	4	38,152,71,43,	0,43345,43691,70979,
#Partially deleted in new
chr11	118015771	118086793	chr11:118015771-118086793	0	-	118015771	118015771	8553170	3	38,152,43,	0,43345,70979,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	118015771	118086793	chr11:118015771-118086793	0	-	118015771	118015771	5263520	4	38,149,152,43,	0,16049,43345,70979,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	118067236	118067539	chr11:118067236-118067539	3	+	118067236	118067236	8553170	1	303,	0,
#Partially deleted in new
chr11	118077011	118119839	chr11:118077011-118119839	1	+	118077302	118117913	789624	12	294,40,153,130,102,41,160,167,99,143,150,1938,	0,17804,26089,27679,30762,31844,34729,36257,37817,38126,40293,40890,
#Partially deleted in new
chr11	118077011	118119839	chr11:118077011-118119839	3	+	118077302	118117913	789624	13	294,40,114,153,130,102,41,160,167,99,143,150,1938,	0,17804,21973,26089,27679,30762,31844,34729,36257,37817,38126,40293,40890,
#Partially deleted in new
chr11	118077037	118095400	chr11:118077037-118095400	0	+	118077037	118077037	8553170	2	268,579,	0,17784,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	118077037	118121890	chr11:118077037-118121890	1	+	118077302	118117913	789624	13	268,34,114,153,130,102,41,160,167,99,143,150,3989,	0,17784,21947,26063,27653,30736,31818,34703,36231,37791,38100,40267,40864,
#Partially deleted in new
chr11	118077070	118118450	chr11:118077070-118118450	0	+	118077302	118117309	789624	12	235,34,114,153,130,102,41,160,167,99,150,549,	0,17751,21914,26030,27620,30703,31785,34670,36198,37758,40234,40831,
#Partially deleted in new
chr11	118077075	118118091	chr11:118077075-118118091	1	+	118104806	118117913	789624	13	230,34,50,153,130,87,41,160,167,99,143,150,190,	0,17746,21909,26025,27615,30713,31780,34665,36193,37753,38062,40229,40826,
#Partially deleted in new
chr11	118077076	118118182	chr11:118077076-118118182	1	+	118077302	118117913	789624	12	229,34,153,130,102,41,160,167,99,143,150,281,	0,17745,26024,27614,30697,31779,34664,36192,37752,38061,40228,40825,
#Partially deleted in new
chr11	118077077	118118444	chr11:118077077-118118444	0	+	118077302	118103119	789624	13	228,44,114,153,130,102,41,160,167,99,143,150,543,	0,17744,21907,26023,27613,30696,31778,34663,36191,37751,38060,40227,40824,
#Partially deleted in new
chr11	118077088	118118459	chr11:118077088-118118459	1	+	118077302	118117913	789624	13	217,40,114,153,130,102,41,160,167,99,143,150,558,	0,17727,21896,26012,27602,30685,31767,34652,36180,37740,38049,40216,40813,
#Partially deleted in new
chr11	118077093	118118457	chr11:118077093-118118457	1	+	118077302	118117913	789624	13	212,40,114,153,130,87,41,160,167,99,143,150,556,	0,17722,21891,26007,27597,30695,31762,34647,36175,37735,38044,40211,40808,
#Partially deleted in new
chr11	118077129	118111835	chr11:118077129-118111835	0	+	118077302	118111835	789624	7	176,34,114,130,102,41,95,	0,17692,21855,27561,30644,31726,34611,
#Partially deleted in new
chr11	118077172	118099171	chr11:118077172-118099171	0	+	118077172	118077172	8553170	3	133,34,187,	0,17649,21812,
#Partially deleted in new
chr11	118094820	118107876	chr11:118094820-118107876	0	+	118094820	118094820	8553170	4	35,153,130,103,	0,8280,9870,12953,
#Partially deleted in new
chr11	118099042	118108223	chr11:118099042-118108223	0	+	118099042	118107879	789624	4	56,153,130,450,	0,4058,5648,8731,
#Partially deleted in new
chr11	118102939	118108867	chr11:118102939-118108867	0	+	118102939	118102939	8553170	4	314,130,102,12,	0,1751,4834,5916,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	118105566	118115219	chr11:118105566-118115219	0	+	118105566	118105566	8553170	5	3330,160,167,99,82,	0,6174,7702,9262,9571,
#Partially deleted in new
chr11	118111870	118118155	chr11:118111870-118118155	0	+	118111870	118111870	8553170	5	30,167,99,150,254,	0,1398,2958,5434,6031,
#Partially deleted in new
chr11	118113275	118115047	chr11:118113275-118115047	0	+	118113275	118113275	8553170	2	160,219,	0,1553,
#Partially deleted in new
chr11	118113291	118118450	chr11:118113291-118118450	0	+	118113291	118117913	789624	3	144,32,549,	0,4131,4610,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	118114870	118115560	chr11:118114870-118115560	0	+	118114870	118114870	8553170	2	57,423,	0,267,
#Partially deleted in new
chr11	118133376	118152820	chr11:118133376-118152820	3	-	118137026	118152673	0	5	3744,130,229,173,208,	0,7830,10456,11680,19236,
#Partially deleted in new
chr11	118133376	118145433	chr11:118133376-118145433	0	-	118133376	118133376	789624	4	3744,130,229,377,	0,7830,10456,11680,
#Partially deleted in new
chr11	118133378	118142873	chr11:118133378-118142873	0	-	118133378	118133378	8553170	3	3742,130,97,	0,7828,9398,
#Partially deleted in new
chr11	118136572	118141864	chr11:118136572-118141864	0	-	118136572	118136572	8553170	2	548,658,	0,4634,
#Partially deleted in new
chr11	118136960	118152888	chr11:118136960-118152888	1	-	118137026	118152673	0	3	160,130,276,	0,4246,15652,
#Partially deleted in new
chr11	118141205	118145700	chr11:118141205-118145700	0	-	118141205	118141205	8553170	3	131,75,644,	0,2781,3851,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	118161950	118176673	chr11:118161950-118176673	3	-	118166886	118176431	0	4	5136,211,167,312,	0,6134,6634,14411,
#Partially deleted in new
chr11	118193739	118225094	chr11:118193739-118225094	1	-	118194324	118214866	789624	10	678,87,94,139,238,110,226,155,63,154,	0,2995,4258,6734,9688,12142,16747,18667,21084,31201,
#Partially deleted in new
chr11	118193962	118213359	chr11:118193962-118213359	3	-	118194324	118212917	789624	9	455,87,94,139,238,110,226,155,455,	0,2772,4035,6511,9465,11919,16524,18444,18942,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	118193964	118224994	chr11:118193964-118224994	0	-	118193964	118193964	8553170	8	453,1357,3192,110,226,155,63,54,	0,2770,6509,11917,16522,18442,20859,30976,
#Partially deleted in new
chr11	118193993	118214891	chr11:118193993-118214891	1	-	118194324	118214866	789624	9	424,87,94,139,238,77,226,155,68,	0,2741,4004,6480,9434,11921,16493,18413,20830,
#Partially deleted in new
chr11	118194003	118213356	chr11:118194003-118213356	0	-	118197967	118212487	789624	9	414,87,124,139,238,110,226,155,442,	0,2731,3964,6470,9424,11878,16483,18403,18911,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	118194076	118205390	chr11:118194076-118205390	0	-	118194076	118194076	8553170	5	341,87,94,139,1963,	0,2658,3921,6397,9351,
#Partially deleted in new
chr11	118194164	118225021	chr11:118194164-118225021	1	-	118194324	118212487	789624	9	253,87,94,139,238,110,226,155,81,	0,2570,3833,6309,9263,11717,16322,18242,30776,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	118197608	118225011	chr11:118197608-118225011	0	-	118197608	118197608	8553170	8	483,139,238,110,226,155,63,71,	0,2865,5819,8273,12878,14798,17215,27332,
#Partially deleted in new
chr11	118203040	118225094	chr11:118203040-118225094	1	-	118203040	118212487	789624	7	5,238,110,226,155,63,154,	0,387,2841,7446,9366,11783,21900,
#Partially deleted in new
chr11	118205658	118212470	chr11:118205658-118212470	0	-	118205658	118205658	8553170	3	333,226,64,	0,4828,6748,
#Partially deleted in new
chr11	118205936	118212885	chr11:118205936-118212885	0	-	118205936	118212487	789624	4	55,226,155,155,	0,4550,6470,6794,
#Partially deleted in new
chr11	118205948	118225092	chr11:118205948-118225092	0	-	118210617	118214866	789624	5	43,226,63,63,152,	0,4538,6458,8875,18992,
#Partially deleted in new
chr11	118205950	118224087	chr11:118205950-118224087	0	-	118205950	118214866	789624	5	41,226,155,63,89,	0,4536,6456,8873,18048,
#Deleted in new
chr11	118208931	118209211	chr11:118208931-118209211	7	-	118208931	118208931	16724991	1	280,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	118226689	118252350	chr11:118226689-118252350	3	-	118229893	118252294	789624	6	3231,64,166,211,167,129,	0,6770,8734,10360,13521,25532,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	118229137	118252347	chr11:118229137-118252347	1	-	118229859	118252294	789624	3	783,64,126,	0,4322,23084,
#Partially deleted in new
chr11	118229237	118252347	chr11:118229237-118252347	1	-	118229893	118252294	789624	6	683,64,166,211,131,126,	0,4222,6186,7812,10973,22984,
#Partially deleted in new
chr11	118229453	118252320	chr11:118229453-118252320	0	-	118235502	118252294	789624	5	467,64,166,167,99,	0,4006,5970,10757,22768,
#Partially deleted in new
chr11	118253402	118264282	chr11:118253402-118264282	3	-	118257249	118264153	789624	6	1831,76,148,211,167,187,	0,3835,6651,9035,9528,10693,
#Partially deleted in new
chr11	118254624	118263203	chr11:118254624-118263203	0	-	118254624	118254624	8553170	5	609,76,148,211,273,	0,2613,5429,7813,8306,
#Partially deleted in new
chr11	118255074	118257660	chr11:118255074-118257660	0	-	118255074	118255074	8553170	2	159,423,	0,2163,
#Partially deleted in new
chr11	118256910	118264536	chr11:118256910-118264536	1	-	118257249	118264153	789624	5	403,148,211,167,441,	0,3143,5527,6020,7185,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	118259236	118264283	chr11:118259236-118264283	0	-	118259236	118259236	8553170	4	965,211,167,188,	0,3201,3694,4859,
#Deleted in new
chr11	118262480	118264386	chr11:118262480-118264386	0	-	118262480	118262480	8553170	2	617,291,	0,1615,
#Deleted in new
chr11	118262719	118264273	chr11:118262719-118264273	0	-	118262719	118262719	8553170	3	131,167,178,	0,211,1376,
#Deleted in new
chr11	118264592	118266817	chr11:118264592-118266817	3	+	118264592	118264592	8553170	1	2225,	0,
#Partially deleted in new
chr11	118304544	118316175	chr11:118304544-118316175	3	+	118304952	118315542	0	9	232,108,21,15,18,249,168,47,690,	0,349,2743,3882,7608,8073,9162,9903,10941,
#Partially deleted in new
chr11	118304729	118313744	chr11:118304729-118313744	0	+	118304729	118304729	8553170	6	47,108,21,15,714,38,	0,164,2558,3697,7423,8977,
#Partially deleted in new
chr11	118304729	118313341	chr11:118304729-118313341	0	+	118304729	118304729	8553170	6	47,108,21,15,18,724,	0,164,2558,3697,7423,7888,
#Partially deleted in new
chr11	118304736	118316175	chr11:118304736-118316175	0	+	118304736	118304736	8553170	7	40,108,21,15,1722,47,690,	0,157,2551,3690,7416,9711,10749,
#Partially deleted in new
chr11	118304898	118316171	chr11:118304898-118316171	1	+	118304952	118315542	789624	7	103,21,15,249,168,47,686,	0,2389,3528,7719,8808,9549,10587,
#Partially deleted in new
chr11	118312143	118315986	chr11:118312143-118315986	0	+	118312143	118312143	8553170	4	723,168,47,501,	0,1563,2304,3342,
#Deleted in new
chr11	118322788	118323083	chr11:118322788-118323083	7	-	118322788	118322788	16724991	1	295,	0,
#Partially deleted in new
chr11	118338953	118342744	chr11:118338953-118342744	3	-	118339161	118342607	0	5	274,44,132,219,192,	0,497,821,1421,3599,
#Deleted in new
chr11	118339075	118340937	chr11:118339075-118340937	0	-	118339161	118340937	789624	4	152,44,219,68,	0,375,1299,1794,
#Partially deleted in new
chr11	118339076	118342647	chr11:118339076-118342647	1	-	118339161	118342607	789624	4	151,44,132,95,	0,374,698,3476,
#Partially deleted in new
chr11	118339093	118342631	chr11:118339093-118342631	1	-	118339161	118342607	0	4	134,44,219,79,	0,357,1281,3459,
#Partially deleted in new
chr11	118339093	118342631	chr11:118339093-118342631	0	-	118339093	118339093	8553170	3	134,44,79,	0,357,3459,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	118344343	118353782	chr11:118344343-118353782	1	+	118349843	118352469	789624	6	135,24,228,44,84,664,	0,4683,5399,7284,8060,8775,
#Partially deleted in new
chr11	118344343	118350909	chr11:118344343-118350909	0	+	118344343	118344343	8553170	4	135,24,228,358,	0,4683,5399,6208,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	118344343	118355161	chr11:118344343-118355161	3	+	118344423	118352469	0	7	135,24,228,132,44,84,2043,	0,4683,5399,6208,7284,8060,8775,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	118344343	118350198	chr11:118344343-118350198	0	+	118344343	118344343	8553170	2	135,1172,	0,4683,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	118344364	118353837	chr11:118344364-118353837	0	+	118344423	118349094	789624	8	114,145,59,228,132,44,84,719,	0,4662,4899,5378,6187,7263,8039,8754,
#Partially deleted in new
chr11	118344385	118349876	chr11:118344385-118349876	0	+	118349843	118349876	8553170	3	93,24,117,	0,4641,5374,
#Partially deleted in new
chr11	118344406	118353247	chr11:118344406-118353247	0	+	118344406	118344406	8553170	8	72,24,59,228,132,44,84,129,	0,4620,4857,5336,6145,7221,7997,8712,
#Partially deleted in new
chr11	118359584	118399211	chr11:118359584-118399211	3	+	118365080	118396440	0	20	90,162,174,113,153,160,203,192,334,121,305,133,188,101,114,175,181,148,158,2898,	0,5455,9046,9838,11929,12922,13501,13909,15311,16989,19861,21806,23004,25050,25247,26853,30140,31072,33153,36729,
#Partially deleted in new
chr11	118359643	118399207	chr11:118359643-118399207	1	+	118365080	118396440	0	20	31,162,174,113,153,181,203,192,334,121,305,133,188,101,114,175,181,148,158,2894,	0,5396,8987,9779,11870,12863,13442,13850,15252,16930,19802,21747,22945,24991,25188,26794,30081,31013,33094,36670,
#Partially deleted in new
chr11	118378500	118396507	chr11:118378500-118396507	1	+	118379458	118396440	789624	11	452,305,133,188,101,114,175,181,148,158,194,	0,945,2890,4088,6134,6331,7937,11224,12156,14237,17813,
#Partially deleted in new
chr11	118397094	118401309	chr11:118397094-118401309	3	-	118397094	118397094	8553170	2	1967,107,	0,4108,
#Partially deleted in new
chr11	118398905	118401895	chr11:118398905-118401895	0	-	118398905	118398905	8553170	2	156,321,	0,2669,
#Partially deleted in new
chr11	118401153	118409851	chr11:118401153-118409851	3	+	118401665	118409098	789624	3	564,161,852,	0,5783,7846,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	118401601	118449569	chr11:118401601-118449569	1	+	118401665	118447687	8553170	3	116,161,1945,	0,5335,46023,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	118401606	118482737	chr11:118401606-118482737	3	+	118472389	118482100	8553170	7	111,70,2654,178,235,65,1023,	0,67168,70055,75198,76360,78567,80108,
#Partially deleted in new
chr11	118401609	118409577	chr11:118401609-118409577	0	+	118401665	118406945	789624	4	108,53,161,578,	0,4047,5327,7390,
#Partially deleted in new
chr11	118401618	118409199	chr11:118401618-118409199	0	+	118401618	118401618	8553170	5	99,62,53,161,200,	0,2305,4038,5318,7381,
#Partially deleted in new
chr11	118401621	118409199	chr11:118401621-118409199	1	+	118401665	118409012	8553170	3	96,40,200,	0,5315,7378,
#Partially deleted in new
chr11	118401631	118431496	chr11:118401631-118431496	1	+	118401665	118431041	789624	3	86,161,473,	0,5305,29392,
#Partially deleted in new
chr11	118401632	118409199	chr11:118401632-118409199	0	+	118401632	118401632	8553170	3	96,161,200,	0,5304,7367,
#Partially deleted in new
chr11	118401651	118407493	chr11:118401651-118407493	0	+	118401651	118401651	8553170	2	66,557,	0,5285,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	118406126	118409610	chr11:118406126-118409610	0	+	118406126	118406126	8553170	2	971,611,	0,2873,
#Deleted in new
chr11	118415976	118416521	chr11:118415976-118416521	3	+	118415976	118415976	8553170	1	545,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	118433120	118435206	chr11:118433120-118435206	3	-	118433120	118433120	8553170	1	2086,	0,
#Partially deleted in new
chr11	118436463	118526832	chr11:118436463-118526832	1	+	118436512	118522172	0	36	481,70,2654,178,235,65,378,74,132,114,147,96,121,123,185,174,111,74,194,107,138,159,118,79,161,186,4249,81,65,171,75,175,108,84,130,4936,	0,32311,35198,40341,41503,43710,45251,45958,47719,48398,52150,53328,53665,54732,55280,56593,57824,58230,59236,59797,61472,61906,62839,63371,64523,65208,65934,71065,72672,73484,75487,83154,83493,84338,84824,85433,
#Partially deleted in new
chr11	118436489	118523917	chr11:118436489-118523917	3	+	118436512	118522172	0	36	455,70,2654,178,235,65,378,74,132,114,147,96,121,114,185,174,111,74,194,107,138,159,118,79,161,186,4249,81,65,171,75,175,108,84,130,2021,	0,32285,35172,40315,41477,43684,45225,45932,47693,48372,52124,53302,53639,54706,55254,56567,57798,58204,59210,59771,61446,61880,62813,63345,64497,65182,65908,71039,72646,73458,75461,83128,83467,84312,84798,85407,
#Partially deleted in new
chr11	118436509	118484314	chr11:118436509-118484314	0	+	118436512	118484314	789624	10	435,99,70,2654,178,235,65,378,74,132,	0,2514,32265,35152,40295,41457,43664,45205,45912,47673,
#Partially deleted in new
chr11	118436512	118522172	chr11:118436512-118522172	1	+	118436512	118522172	8553170	35	432,70,2654,178,235,65,378,74,132,147,96,121,114,185,174,111,74,194,107,138,159,118,79,161,186,4249,81,65,171,75,175,108,84,130,276,	0,32262,35149,40292,41454,43661,45202,45909,47670,52101,53279,53616,54683,55231,56544,57775,58181,59187,59748,61423,61857,62790,63322,64474,65159,65885,71016,72623,73435,75438,83105,83444,84289,84775,85384,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	118436743	118449995	chr11:118436743-118449995	0	+	118436743	118447687	789624	2	201,2371,	0,10881,
#Partially deleted in new
chr11	118436743	118449984	chr11:118436743-118449984	0	+	118436743	118447687	789624	3	201,112,186,	0,10881,13055,
#Partially deleted in new
chr11	118436743	118481736	chr11:118436743-118481736	0	+	118436743	118481736	789624	7	201,70,137,178,235,65,22,	0,32031,37435,40061,41223,43430,44971,
#Partially deleted in new
chr11	118436761	118474307	chr11:118436761-118474307	0	+	118436761	118474307	789624	4	183,99,70,129,	0,2262,32013,37417,
#Partially deleted in new
chr11	118436926	118474287	chr11:118436926-118474287	0	+	118436926	118474287	8553170	4	18,70,324,109,	0,31848,34735,37252,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	118436931	118469103	chr11:118436931-118469103	0	+	118436931	118436931	8553170	2	13,329,	0,31843,
#Deleted in new
chr11	118437191	118439173	chr11:118437191-118439173	0	+	118437191	118437191	8553170	1	1982,	0,
#Partially deleted in new
chr11	118439033	118448055	chr11:118439033-118448055	0	+	118439033	118447687	8553170	2	89,431,	0,8591,
#Partially deleted in new
chr11	118467550	118471777	chr11:118467550-118471777	0	+	118467550	118467550	8553170	2	1294,116,	0,4111,
#Partially deleted in new
chr11	118481987	118484869	chr11:118481987-118484869	0	+	118481987	118481987	8553170	3	105,74,687,	0,434,2195,
#Partially deleted in new
chr11	118481987	118484314	chr11:118481987-118484314	0	+	118481987	118481987	8553170	2	105,132,	0,2195,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	118482422	118483204	chr11:118482422-118483204	0	+	118482422	118482422	8553170	2	73,85,	0,697,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	118495190	118505185	chr11:118495190-118505185	0	+	118495190	118495190	8553170	4	2883,2778,186,2788,	0,3179,6481,7207,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	118505613	118508487	chr11:118505613-118508487	0	+	118505613	118505613	8553170	2	1033,959,	0,1915,
#Partially deleted in new
chr11	118506263	118510110	chr11:118506263-118510110	0	+	118506263	118510110	8553170	4	383,102,65,163,	0,1244,2872,3684,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	118506545	118513876	chr11:118506545-118513876	0	+	118506545	118509186	8553170	5	101,81,42,171,1926,	0,983,2613,3402,5405,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	118507901	118522868	chr11:118507901-118522868	0	+	118507901	118507901	8553170	9	71,65,171,75,175,108,84,130,972,	0,1234,2046,4049,11716,12055,12900,13386,13995,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	118508842	118513214	chr11:118508842-118513214	0	+	118508842	118508842	8553170	3	358,171,1264,	0,1105,3108,
#Partially deleted in new
chr11	118509547	118525576	chr11:118509547-118525576	0	+	118509547	118509547	8553170	7	571,75,175,108,84,130,3680,	0,2403,10070,10409,11254,11740,12349,
#Partially deleted in new
chr11	118511910	118530577	chr11:118511910-118530577	0	-	118511910	118511910	789624	3	190,49,74,	0,9355,18593,
#Partially deleted in new
chr11	118519384	118530570	chr11:118519384-118530570	1	-	118519384	118519384	8553170	3	312,69,67,	0,1861,11119,
#Partially deleted in new
chr11	118519438	118530775	chr11:118519438-118530775	3	-	118519438	118519438	789624	3	258,49,272,	0,1827,11065,
#Partially deleted in new
chr11	118519495	118530569	chr11:118519495-118530569	1	-	118519495	118519495	789624	4	201,49,107,66,	0,1770,7973,11008,
#Partially deleted in new
chr11	118519556	118522195	chr11:118519556-118522195	0	+	118519556	118519556	8553170	5	236,108,84,130,299,	0,400,1245,1731,2340,
#Partially deleted in new
chr11	118519615	118531094	chr11:118519615-118531094	0	-	118519615	118519615	789624	3	81,49,104,	0,1650,11375,
#Partially deleted in new
chr11	118527471	118531197	chr11:118527471-118531197	3	+	118527494	118530916	789624	3	141,189,544,	0,1131,3182,
#Partially deleted in new
chr11	118527471	118531197	chr11:118527471-118531197	0	+	118527494	118527950	789624	4	141,135,189,544,	0,450,1131,3182,
#Partially deleted in new
chr11	118527471	118531197	chr11:118527471-118531197	0	+	118527494	118527950	789624	4	141,135,166,544,	0,450,1154,3182,
#Deleted in new
chr11	118531040	118535835	chr11:118531040-118535835	1	+	118531801	118534580	789624	8	194,94,312,291,31,101,90,1329,	0,737,1109,1876,2816,2988,3225,3466,
#Deleted in new
chr11	118531087	118535832	chr11:118531087-118535832	1	+	118531801	118534580	789624	8	147,97,312,291,31,101,90,1326,	0,687,1062,1829,2769,2941,3178,3419,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	118531087	118547280	chr11:118531087-118547280	1	+	118531801	118546147	789624	8	147,97,312,291,31,101,87,1162,	0,687,1062,1829,2769,2941,3181,15031,
#Deleted in new
chr11	118531174	118532370	chr11:118531174-118532370	0	+	118531174	118531174	8553170	2	60,596,	0,600,
#Deleted in new
chr11	118531191	118533007	chr11:118531191-118533007	0	+	118531801	118532176	789624	4	43,97,365,91,	0,583,905,1725,
#Deleted in new
chr11	118531191	118532310	chr11:118531191-118532310	0	+	118531191	118531191	8553170	2	680,161,	0,958,
#Deleted in new
chr11	118531191	118533540	chr11:118531191-118533540	0	+	118531801	118533540	789624	4	43,97,312,121,	0,583,958,2228,
#Deleted in new
chr11	118531191	118533525	chr11:118531191-118533525	0	+	118531801	118532453	789624	5	43,94,52,291,106,	0,586,1218,1725,2228,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	118531198	118546484	chr11:118531198-118546484	1	+	118531801	118546147	789624	9	36,97,312,291,132,31,101,90,366,	0,576,951,1718,2221,2658,2830,3067,14920,
#Deleted in new
chr11	118531201	118535828	chr11:118531201-118535828	1	+	118531801	118534580	789624	7	33,97,291,31,101,90,1322,	0,573,1715,2655,2827,3064,3305,
#Deleted in new
chr11	118531201	118535834	chr11:118531201-118535834	0	+	118531201	118531201	8553170	6	1260,291,31,101,87,1328,	0,1715,2655,2827,3067,3305,
#Deleted in new
chr11	118531201	118534543	chr11:118531201-118534543	0	+	118531201	118534543	789624	6	33,291,31,101,90,37,	0,1715,2655,2827,3064,3305,
#Deleted in new
chr11	118531201	118533622	chr11:118531201-118533622	0	+	118531201	118531201	8553170	5	33,97,312,291,203,	0,573,948,1715,2218,
#Deleted in new
chr11	118531201	118532431	chr11:118531201-118532431	0	+	118531201	118531201	8553170	3	33,425,97,	0,573,1133,
#Deleted in new
chr11	118531201	118532705	chr11:118531201-118532705	0	+	118531201	118531201	8553170	3	33,97,416,	0,573,1088,
#Deleted in new
chr11	118531201	118534120	chr11:118531201-118534120	0	+	118531801	118534120	789624	5	33,97,312,31,92,	0,573,948,2655,2827,
#Deleted in new
chr11	118531201	118535833	chr11:118531201-118535833	1	+	118531801	118535629	789624	9	33,97,312,291,132,31,101,87,326,	0,573,948,1715,2218,2655,2827,3067,4306,
#Deleted in new
chr11	118531201	118533140	chr11:118531201-118533140	0	+	118531801	118533140	789624	4	33,97,216,224,	0,573,1044,1715,
#Deleted in new
chr11	118531201	118533208	chr11:118531201-118533208	0	+	118531201	118531201	8553170	4	33,94,312,119,	0,576,948,1888,
#Deleted in new
chr11	118531201	118535828	chr11:118531201-118535828	0	+	118531201	118531201	8553170	6	33,97,1598,101,90,1322,	0,573,1088,2827,3064,3305,
#Deleted in new
chr11	118531202	118532859	chr11:118531202-118532859	0	+	118531202	118531202	8553170	3	32,97,710,	0,572,947,
#Deleted in new
chr11	118531202	118533477	chr11:118531202-118533477	0	+	118531202	118531202	8553170	5	32,59,114,291,58,	0,572,1145,1714,2217,
#Deleted in new
chr11	118531208	118535835	chr11:118531208-118535835	3	+	118531801	118534580	789624	9	26,97,312,291,132,31,101,90,1329,	0,566,941,1708,2211,2648,2820,3057,3298,
#Deleted in new
chr11	118531357	118532296	chr11:118531357-118532296	0	+	118531801	118532296	789624	2	514,51,	0,888,
#Deleted in new
chr11	118531389	118535829	chr11:118531389-118535829	1	+	118531801	118534580	789624	7	482,312,291,31,101,90,1323,	0,760,1527,2467,2639,2876,3117,
#Deleted in new
chr11	118531470	118533033	chr11:118531470-118533033	0	+	118531470	118531470	8553170	4	56,97,312,117,	0,304,679,1446,
#Deleted in new
chr11	118531495	118532949	chr11:118531495-118532949	0	+	118531801	118532949	789624	4	106,97,312,33,	0,279,654,1421,
#Deleted in new
chr11	118531525	118531985	chr11:118531525-118531985	0	+	118531525	118531525	8553170	2	76,211,	0,249,
#Deleted in new
chr11	118531572	118533519	chr11:118531572-118533519	0	+	118531572	118531572	8553170	3	889,291,100,	0,1344,1847,
#Deleted in new
chr11	118533031	118534726	chr11:118533031-118534726	0	+	118533031	118534580	789624	6	176,132,31,101,87,220,	0,388,825,997,1237,1475,
#Partially deleted in new
chr11	118544527	118566076	chr11:118544527-118566076	1	-	118544915	118559829	789624	12	484,86,61,67,122,129,94,75,140,80,97,287,	0,881,1265,7258,7686,9931,10462,10720,12378,15257,20437,21262,
#Partially deleted in new
chr11	118544542	118566035	chr11:118544542-118566035	3	-	118544915	118559829	789624	13	469,86,61,67,122,129,94,75,140,153,80,97,246,	0,866,1250,7243,7671,9916,10447,10705,12363,13195,15242,20422,21247,
#Partially deleted in new
chr11	118544591	118565917	chr11:118544591-118565917	1	-	118545003	118559829	789624	12	420,61,67,122,129,94,75,140,153,80,97,128,	0,1201,7194,7622,9867,10398,10656,12314,13146,15193,20373,21198,
#Partially deleted in new
chr11	118544900	118557656	chr11:118544900-118557656	0	-	118544900	118544900	8553170	9	111,86,61,67,122,129,94,75,751,	0,508,892,6885,7313,9558,10089,10347,12005,
#Partially deleted in new
chr11	118545824	118555627	chr11:118545824-118555627	0	-	118545824	118545824	8553170	6	29,67,122,129,94,380,	0,5961,6389,8634,9165,9423,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	118552229	118560422	chr11:118552229-118560422	0	-	118552229	118559829	789624	6	106,129,94,75,140,638,	0,2229,2760,3018,4676,7555,
#Partially deleted in new
chr11	118552234	118565646	chr11:118552234-118565646	0	-	118552234	118559829	789624	8	101,129,94,75,140,80,97,60,	0,2224,2755,3013,4671,7550,12730,13352,
#Partially deleted in new
chr11	118555019	118572760	chr11:118555019-118572760	0	-	118555019	118559829	789624	7	64,75,140,153,80,97,165,	0,228,1886,2718,4765,9945,17576,
#Partially deleted in new
chr11	118555020	118572970	chr11:118555020-118572970	0	-	118555020	118559829	789624	6	63,75,140,80,97,375,	0,227,1885,4764,9944,17575,
#Partially deleted in new
chr11	118556905	118572703	chr11:118556905-118572703	0	-	118556905	118559829	789624	5	140,80,97,128,108,	0,2879,8059,8884,15690,
#Partially deleted in new
chr11	118556993	118566011	chr11:118556993-118566011	0	-	118556993	118556993	8553170	4	52,80,127,222,	0,2791,7971,8796,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	118560064	118565928	chr11:118560064-118565928	0	-	118560064	118560064	8553170	3	354,97,139,	0,4900,5725,
#Deleted in new
chr11	118560689	118561580	chr11:118560689-118561580	7	+	118560689	118560689	16724991	1	891,	0,
#Partially deleted in new
chr11	118572389	118600993	chr11:118572389-118600993	1	+	118572547	118600714	789624	9	161,180,206,165,166,148,109,205,369,	0,10789,11419,12090,17951,20319,21200,25317,28235,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	118572423	118602928	chr11:118572423-118602928	1	+	118573657	118600714	789624	11	127,164,264,180,206,165,166,148,109,205,2304,	0,1196,8822,10755,11385,12056,17917,20285,21166,25283,28201,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	118572423	118602927	chr11:118572423-118602927	1	+	118572547	118601383	789624	5	127,264,180,61,1606,	0,8822,10755,11385,28898,
#Partially deleted in new
chr11	118572435	118603033	chr11:118572435-118603033	1	+	118572547	118601728	789624	3	115,156,1398,	0,8810,29200,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	118572452	118602928	chr11:118572452-118602928	3	+	118572547	118600714	789624	10	98,264,180,206,165,166,148,109,205,2304,	0,8793,10726,11356,12027,17888,20256,21137,25254,28172,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	118593987	118594093	chr11:118593987-118594093	3	+	118593987	118593987	8553170	1	106,	0,
#Partially deleted in new
chr11	118606439	118658031	chr11:118606439-118658031	3	+	118613836	118656823	789624	24	233,157,81,124,171,126,1346,273,141,138,156,111,90,141,141,103,295,91,147,117,103,86,33,1349,	0,6854,7376,8119,9601,18494,20865,24767,25473,25719,28953,32451,32722,35814,37360,37632,38916,39295,41490,43637,44005,49165,49420,50243,
#Partially deleted in new
chr11	118607590	118627569	chr11:118607590-118627569	1	+	118613836	118627569	789624	7	109,81,124,171,126,239,24,	0,6225,6968,8450,17343,19714,19955,
#Partially deleted in new
chr11	118607590	118658038	chr11:118607590-118658038	1	+	118613836	118656823	789624	23	109,81,124,171,126,1346,273,141,138,156,111,90,141,141,103,295,91,147,117,103,86,33,1356,	0,6225,6968,8450,17343,19714,23616,24322,24568,27802,31300,31571,34663,36209,36481,37765,38144,40339,42486,42854,48014,48269,49092,
#Partially deleted in new
chr11	118607614	118658028	chr11:118607614-118658028	0	+	118613836	118644182	789624	22	85,157,81,124,171,126,1346,273,141,138,156,111,90,141,620,295,91,147,117,103,86,1346,	0,5679,6201,6944,8426,17319,19690,23592,24298,24544,27778,31276,31547,36185,36457,37741,38120,40315,42462,42830,47990,49068,
#Partially deleted in new
chr11	118607615	118658028	chr11:118607615-118658028	0	+	118613836	118644182	789624	21	84,81,124,171,126,1346,273,141,138,156,111,90,141,620,295,91,147,117,103,86,1346,	0,6200,6943,8425,17318,19689,23591,24297,24543,27777,31275,31546,36184,36456,37740,38119,40314,42461,42829,47989,49067,
#Partially deleted in new
chr11	118607632	118632037	chr11:118607632-118632037	0	+	118607632	118607632	8553170	7	67,81,124,171,126,624,125,	0,6183,6926,8408,17301,19675,24280,
#Partially deleted in new
chr11	118607642	118658025	chr11:118607642-118658025	1	+	118613836	118656823	789624	21	57,81,124,171,126,1346,273,141,138,156,111,90,141,103,295,91,147,117,103,86,1343,	0,6173,6916,8398,17291,19662,23564,24270,24516,27750,31248,31519,36157,36429,37713,38092,40287,42434,42802,47962,49040,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	118613152	118615194	chr11:118613152-118615194	0	+	118613152	118613152	8553170	2	744,636,	0,1406,
#Partially deleted in new
chr11	118615584	118627464	chr11:118615584-118627464	0	+	118615584	118615584	8553170	4	38,171,126,160,	0,456,9349,11720,
#Partially deleted in new
chr11	118621362	118627593	chr11:118621362-118627593	0	+	118621362	118621362	8553170	3	176,126,289,	0,3571,5942,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	118624083	118625059	chr11:118624083-118625059	0	+	118624083	118624083	8553170	2	428,126,	0,850,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr11	118626929	118658025	chr11:118626929-118658025	0	+	118626929	118626929	8553170	18	1721,273,141,138,156,111,90,141,141,103,45,295,91,147,117,103,86,1343,	0,4277,4983,5229,8463,11961,12232,15324,16870,17142,17717,18426,18805,21000,23147,23515,28675,29753,
#Partially deleted in new
chr11	118629978	118658028	chr11:118629978-118658028	0	+	118629978	118629978	8553170	16	104,273,141,138,156,111,90,141,103,295,91,147,117,103,86,1346,	0,1228,1934,2180,5414,8912,9183,13821,14093,15377,15756,17951,20098,20466,25626,26704,
#Partially deleted in new
chr11	118631915	118658025	chr11:118631915-118658025	0	+	118631915	118631915	8553170	13	138,156,111,90,141,103,295,91,147,117,103,86,1343,	0,3477,6975,7246,11884,12156,13440,13819,16014,18161,18529,23689,24767,
#Partially deleted in new
chr11	118631975	118658025	chr11:118631975-118658025	0	+	118631975	118656823	789624	15	78,138,129,156,111,90,141,103,295,91,147,117,103,86,1343,	0,183,2947,3417,6915,7186,11824,12096,13380,13759,15954,18101,18469,23629,24707,
#Partially deleted in new
chr11	118632212	118643940	chr11:118632212-118643940	0	+	118632212	118632212	8553170	5	2839,156,111,90,141,	0,3180,6678,6949,11587,
#Partially deleted in new
chr11	118634977	118639355	chr11:118634977-118639355	0	+	118634977	118634977	8553170	4	74,156,111,194,	0,415,3913,4184,
#Partially deleted in new
chr11	118635023	118639237	chr11:118635023-118639237	0	+	118635023	118635023	8553170	4	140,156,111,76,	0,369,3867,4138,
#Partially deleted in new
chr11	118635028	118650127	chr11:118635028-118650127	0	+	118635028	118635028	8553170	6	23,156,111,60,147,51,	0,364,3862,10737,12901,15048,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	118636619	118638097	chr11:118636619-118638097	3	+	118636619	118636619	8553170	2	1243,145,	0,1333,
#Deleted in new
chr11	118639406	118645783	chr11:118639406-118645783	0	+	118639406	118639406	8553170	5	2378,141,141,103,428,	0,2847,4393,4665,5949,
#Partially deleted in new
chr11	118641576	118656841	chr11:118641576-118656841	0	+	118641576	118641576	8553170	11	208,141,141,103,295,91,147,117,103,86,159,	0,677,2223,2495,3779,4158,6353,8500,8868,14028,15106,
#Deleted in new
chr11	118642038	118644565	chr11:118642038-118644565	0	+	118642038	118642038	8553170	3	356,141,494,	0,1761,2033,
#Deleted in new
chr11	118642350	118644302	chr11:118642350-118644302	0	+	118642350	118642350	8553170	2	44,503,	0,1449,
#Deleted in new
chr11	118643999	118644079	chr11:118643999-118644079	3	+	118643999	118643999	5263520	1	80,	0,
#Partially deleted in new
chr11	118644088	118647837	chr11:118644088-118647837	0	+	118644088	118644088	8553170	4	86,295,91,63,	0,1267,1646,3686,
#Partially deleted in new
chr11	118644368	118650521	chr11:118644368-118650521	0	+	118644368	118644368	8553170	5	1282,91,147,117,77,	0,1366,3561,5708,6076,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	118646333	118657152	chr11:118646333-118657152	0	+	118646333	118646333	8553170	5	1743,117,103,86,470,	0,3743,4111,9271,10349,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	118650600	118657490	chr11:118650600-118657490	0	+	118650600	118650600	8553170	2	5090,808,	0,6082,
#Partially deleted in new
chr11	118657315	118679673	chr11:118657315-118679673	3	-	118658288	118679627	789624	15	1126,54,113,112,218,195,50,123,117,93,101,88,145,101,135,	0,1364,1589,2054,2431,3223,3550,3844,4077,4321,4574,5565,5736,6023,22223,
#Partially deleted in new
chr11	118658231	118679650	chr11:118658231-118679650	0	-	118663171	118679627	789624	13	210,54,113,112,218,195,50,123,117,93,181,145,112,	0,448,673,1138,1515,2307,2634,2928,3161,3405,4556,4820,21307,
#Partially deleted in new
chr11	118658268	118679666	chr11:118658268-118679666	1	-	118658288	118679627	789624	14	173,54,113,112,218,195,50,123,117,101,88,145,101,128,	0,411,636,1101,1478,2270,2597,2891,3124,3621,4612,4783,5070,21270,
#Partially deleted in new
chr11	118659808	118679646	chr11:118659808-118679646	0	-	118659808	118659808	8553170	10	156,195,417,117,93,101,88,145,101,108,	0,730,1057,1584,1828,2081,3072,3243,3530,19730,
#Partially deleted in new
chr11	118662730	118679690	chr11:118662730-118679690	0	-	118662730	118662730	8553170	3	238,145,152,	0,321,16808,
#Partially deleted in new
chr11	118688032	118690599	chr11:118688032-118690599	7	-	118688032	118688032	16724991	4	153,54,89,215,	0,1696,2004,2352,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	118700426	118708848	chr11:118700426-118708848	3	+	118700426	118700426	8553170	3	217,231,467,	0,4181,7955,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	118702341	118702447	chr11:118702341-118702447	3	+	118702341	118702341	8553170	1	106,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	118704607	118750263	chr11:118704607-118750263	0	+	118704607	118704607	8553170	3	231,142,51,	0,3774,45605,
#Partially deleted in new
chr11	118747765	118791136	chr11:118747765-118791136	3	-	118754711	118786251	0	14	4332,183,102,64,117,129,123,95,147,130,105,64,467,39,	0,6939,7636,8494,9405,11008,12156,15446,17443,20457,31866,33355,38286,43332,
#Partially deleted in new
chr11	118747765	118790948	chr11:118747765-118790948	1	-	118754711	118786251	0	14	4332,183,102,64,117,129,123,95,147,130,105,64,467,94,	0,6939,7636,8494,9405,11008,12156,15446,17443,20457,31866,33355,38286,43089,
#Partially deleted in new
chr11	118749886	118791147	chr11:118749886-118791147	1	-	118751888	118786251	789624	7	2019,48,130,105,64,467,50,	0,15421,18336,29745,31234,36165,41211,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	118751364	118759369	chr11:118751364-118759369	0	-	118751364	118751364	8553170	6	733,183,102,64,117,596,	0,3340,4037,4895,5806,7409,
#Partially deleted in new
chr11	118754588	118790948	chr11:118754588-118790948	1	-	118754711	118786251	0	13	299,102,64,117,129,123,95,147,130,105,64,467,94,	0,813,1671,2582,4185,5333,8623,10620,13634,25043,26532,31463,36266,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	118767626	118791136	chr11:118767626-118791136	0	-	118767626	118767626	8553170	3	726,467,39,	0,18425,23471,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	118781119	118790359	chr11:118781119-118790359	0	-	118781119	118781119	8553170	2	65,4308,	0,4932,
#Partially deleted in new
chr11	118785832	118791149	chr11:118785832-118791149	0	-	118785832	118785832	8553170	2	686,52,	0,5265,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	118791253	118793137	chr11:118791253-118793137	3	+	118791253	118791253	8553170	1	1884,	0,
#Deleted in new
chr11	118821894	118822084	chr11:118821894-118822084	7	+	118821894	118821894	16724991	1	190,	0,
#Deleted in new
chr11	118833845	118834556	chr11:118833845-118834556	7	-	118833845	118833845	16724991	1	711,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	118836009	118836111	chr11:118836009-118836111	3	+	118836009	118836009	8553170	1	102,	0,
#Partially deleted in new
chr11	118883765	118897799	chr11:118883765-118897799	3	+	118883941	118894663	789624	2	227,4204,	0,9830,
#Deleted in new
chr11	118885840	118887742	chr11:118885840-118887742	3	-	118885840	118885840	8553170	2	1414,232,	0,1670,
#Partially deleted in new
chr11	118893874	118910904	chr11:118893874-118910904	3	-	118898414	118909939	0	8	5634,282,2290,85,217,120,386,991,	0,6042,6744,9115,9361,13608,14395,16039,
#Partially deleted in new
chr11	118897745	118925608	chr11:118897745-118925608	1	-	118898414	118908570	789624	8	1763,282,2290,85,217,120,386,371,	0,2171,2873,5244,5490,9737,10524,27492,
#Partially deleted in new
chr11	118899936	118911293	chr11:118899936-118911293	0	-	118899936	118899936	8553170	3	262,143,40,	0,682,11317,
#Partially deleted in new
chr11	118902773	118908625	chr11:118902773-118908625	0	-	118902773	118902773	8553170	4	135,85,120,356,	0,216,4709,5496,
#Partially deleted in new
chr11	118908416	118925453	chr11:118908416-118925453	0	-	118908416	118909939	789624	4	239,102,54,216,	0,1497,10409,16821,
#Deleted in new
chr11	118910707	118910787	chr11:118910707-118910787	3	+	118910707	118910707	5263520	1	80,	0,
#Partially deleted in new
chr11	118925163	118958554	chr11:118925163-118958554	0	+	118925163	118925163	8553170	6	128,62,132,107,71,458,	0,26040,31719,32044,32434,32933,
#Deleted in new
chr11	118931215	118931490	chr11:118931215-118931490	3	+	118931215	118931215	8553170	1	275,	0,
#Partially deleted in new
chr11	118956315	118958559	chr11:118956315-118958559	3	+	118956350	118958233	789624	5	111,132,139,71,463,	0,567,892,1282,1781,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	118970497	118970595	chr11:118970497-118970595	3	+	118970497	118970497	8553170	1	98,	0,
#Partially deleted in new
chr11	118971706	118981291	chr11:118971706-118981291	3	+	118971931	118981236	789624	6	286,75,248,227,239,84,	0,7075,7250,7735,8783,9501,
#Partially deleted in new
chr11	118971711	118981264	chr11:118971711-118981264	0	+	118971931	118980573	789624	7	281,75,248,156,75,161,57,	0,7070,7245,7801,8517,8856,9496,
#Deleted in new
chr11	118978778	118980572	chr11:118978778-118980572	0	+	118978778	118980572	789624	3	78,248,83,	0,178,1711,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	118994333	118994630	chr11:118994333-118994630	3	+	118994333	118994333	8553170	1	297,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	118994559	118994655	chr11:118994559-118994655	3	+	118994559	118994559	8553170	1	96,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	118994823	118996604	chr11:118994823-118996604	0	-	118994823	118994823	8553170	2	147,406,	0,1375,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	118996194	118998004	chr11:118996194-118998004	3	-	118996194	118996194	8553170	2	1082,277,	0,1533,
#Partially deleted in new
chr11	118998141	119015745	chr11:118998141-119015745	3	+	118998197	119015598	789624	11	176,164,99,67,63,65,106,31,90,133,208,	0,288,869,12622,13079,13797,14007,15090,16852,17165,17396,
#Partially deleted in new
chr11	118998144	119012262	chr11:118998144-119012262	0	+	118998144	118998144	8553170	6	449,99,67,91,65,114,	0,866,12619,13076,13794,14004,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	118998154	119015641	chr11:118998154-119015641	0	+	118998197	119001676	789624	11	163,164,99,213,67,91,65,106,90,133,104,	0,275,856,3458,12609,13066,13784,13994,16839,17152,17383,
#Partially deleted in new
chr11	118998167	119015641	chr11:118998167-119015641	0	+	118998197	119011982	789624	11	150,164,99,67,91,65,106,31,90,152,104,	0,262,843,12596,13053,13771,13981,15064,16826,17120,17370,
#Deleted in new
chr11	118998174	118999291	chr11:118998174-118999291	0	+	118998174	118998174	8553170	3	143,164,281,	0,255,836,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	118999040	119014346	chr11:118999040-119014346	0	+	118999040	118999040	8553170	7	69,67,91,65,106,31,133,	0,11723,12180,12898,13108,14191,15173,
#Partially deleted in new
chr11	119003011	119003446	chr11:119003011-119003446	7	-	119003011	119003011	16724991	1	435,	0,
#Partially deleted in new
chr11	119005726	119005934	chr11:119005726-119005934	7	-	119005726	119005726	16724991	1	208,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	119009533	119012177	chr11:119009533-119012177	0	+	119009533	119009533	8553170	4	1297,91,65,29,	0,1687,2405,2615,
#Partially deleted in new
chr11	119011206	119015092	chr11:119011206-119015092	0	+	119011206	119011206	8553170	4	105,316,31,99,	0,732,2025,3787,
#Partially deleted in new
chr11	119011958	119015791	chr11:119011958-119015791	0	+	119011958	119011958	8553170	4	1304,90,133,254,	0,3035,3348,3579,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	119014065	119015428	chr11:119014065-119015428	0	+	119014065	119014065	8553170	2	1018,122,	0,1241,
#Partially deleted in new
chr11	119015711	119018690	chr11:119015711-119018690	3	-	119015844	119018284	0	5	47,99,184,96,409,	0,129,1650,2246,2570,
#Partially deleted in new
chr11	119015711	119018678	chr11:119015711-119018678	0	-	119017412	119018284	789624	5	47,99,72,96,397,	0,129,1650,2246,2570,
#Partially deleted in new
chr11	119015711	119018330	chr11:119015711-119018330	0	-	119017936	119018284	789624	5	47,99,184,129,49,	0,129,1650,2213,2570,
#Partially deleted in new
chr11	119015725	119018691	chr11:119015725-119018691	0	-	119015725	119015725	8553170	3	33,99,1330,	0,115,1636,
#Partially deleted in new
chr11	119017360	119018666	chr11:119017360-119018666	0	-	119017360	119017360	8553170	2	693,385,	0,921,
#Partially deleted in new
chr11	119017697	119018044	chr11:119017697-119018044	0	-	119017697	119017697	8553170	2	102,87,	0,260,
#Partially deleted in new
chr11	119018431	119024134	chr11:119018431-119024134	3	+	119018795	119023399	0	5	539,175,104,127,814,	0,711,1718,3328,4889,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	119018762	119019503	chr11:119018762-119019503	0	+	119018762	119018762	8553170	2	208,361,	0,380,
#Partially deleted in new
chr11	119018765	119023672	chr11:119018765-119023672	1	+	119018795	119023399	789624	5	205,175,104,13,352,	0,377,1384,3108,4555,
#Partially deleted in new
chr11	119018765	119023665	chr11:119018765-119023665	1	+	119018795	119023399	0	5	205,68,49,127,345,	0,377,1439,2994,4555,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	119018765	119020749	chr11:119018765-119020749	0	+	119018765	119018765	8553170	3	205,175,600,	0,377,1384,
#Partially deleted in new
chr11	119018765	119023642	chr11:119018765-119023642	1	+	119018795	119023399	789624	3	205,127,322,	0,2994,4555,
#Partially deleted in new
chr11	119018765	119023421	chr11:119018765-119023421	1	+	119018795	119023399	789624	5	205,46,104,127,101,	0,377,1384,2994,4555,
#Partially deleted in new
chr11	119018765	119023672	chr11:119018765-119023672	0	+	119018765	119018765	8553170	4	552,104,127,352,	0,1384,2994,4555,
#Partially deleted in new
chr11	119018765	119025454	chr11:119018765-119025454	1	+	119018795	119025049	789624	5	205,175,104,127,598,	0,377,1384,2994,6091,
#Partially deleted in new
chr11	119018789	119023394	chr11:119018789-119023394	0	+	119018795	119019321	789624	5	181,282,104,127,74,	0,353,1360,2970,4531,
#Partially deleted in new
chr11	119018794	119023659	chr11:119018794-119023659	0	+	119018795	119021790	789624	4	176,175,127,339,	0,348,2965,4526,
#Partially deleted in new
chr11	119018943	119019012	chr11:119018943-119019012	3	+	119018943	119018943	5263520	1	69,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	119019391	119023671	chr11:119019391-119023671	0	+	119019391	119019391	8553170	3	862,127,351,	0,2368,3929,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	119020316	119023674	chr11:119020316-119023674	0	+	119020316	119020316	8553170	2	1570,354,	0,3004,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	119021767	119023282	chr11:119021767-119023282	0	+	119021767	119021767	8553170	2	119,273,	0,1242,
#Partially deleted in new
chr11	119024113	119030906	chr11:119024113-119030906	0	-	119024113	119024113	8553170	10	963,139,114,86,159,245,233,343,504,58,	0,1077,1853,2489,2823,3514,4080,5108,6118,6735,
#Partially deleted in new
chr11	119024350	119030906	chr11:119024350-119030906	1	-	119024909	119029369	789624	10	726,139,114,86,159,97,147,233,343,58,	0,840,1616,2252,2586,3277,3375,3843,4871,6498,
#Partially deleted in new
chr11	119024350	119030906	chr11:119024350-119030906	3	-	119024909	119029369	789624	12	726,139,66,114,86,159,97,147,233,343,188,58,	0,840,1341,1616,2252,2586,3277,3375,3843,4871,6197,6498,
#Partially deleted in new
chr11	119024350	119030906	chr11:119024350-119030906	1	-	119024909	119028355	789624	11	726,139,114,86,159,97,147,233,100,173,58,	0,840,1616,2252,2586,3277,3375,3843,4384,5041,6498,
#Partially deleted in new
chr11	119024350	119030906	chr11:119024350-119030906	1	-	119024909	119029369	789624	11	726,139,114,86,159,97,147,233,343,504,58,	0,840,1616,2252,2586,3277,3375,3843,4871,5881,6498,
#Partially deleted in new
chr11	119024355	119029034	chr11:119024355-119029034	0	-	119024355	119024355	8553170	6	721,139,114,86,159,1407,	0,835,1611,2247,2581,3272,
#Partially deleted in new
chr11	119024355	119030863	chr11:119024355-119030863	0	-	119024355	119024355	8553170	3	721,1905,3236,	0,835,3272,
#Partially deleted in new
chr11	119024367	119030379	chr11:119024367-119030379	0	-	119024367	119024367	8553170	10	709,139,66,114,86,159,245,233,343,210,	0,823,1324,1599,2235,2569,3260,3826,4854,5802,
#Partially deleted in new
chr11	119024387	119030880	chr11:119024387-119030880	0	-	119024387	119024387	8553170	9	689,139,114,86,159,245,233,343,32,	0,803,1579,2215,2549,3240,3806,4834,6461,
#Partially deleted in new
chr11	119024422	119030889	chr11:119024422-119030889	0	-	119024422	119024422	8553170	9	654,139,114,118,159,245,233,343,41,	0,768,1544,2148,2514,3205,3771,4799,6426,
#Partially deleted in new
chr11	119024423	119030890	chr11:119024423-119030890	0	-	119024423	119024423	8553170	9	653,139,114,86,159,143,233,343,42,	0,767,1543,2179,2513,3204,3770,4798,6425,
#Partially deleted in new
chr11	119024429	119029974	chr11:119024429-119029974	0	-	119024429	119024429	8553170	9	647,139,114,86,159,245,233,343,108,	0,761,1537,2173,2507,3198,3764,4792,5437,
#Partially deleted in new
chr11	119024877	119030872	chr11:119024877-119030872	0	-	119024877	119024877	8553170	10	199,139,114,86,159,245,233,100,173,24,	0,313,1089,1725,2059,2750,3316,3857,4514,5971,
#Partially deleted in new
chr11	119024909	119029369	chr11:119024909-119029369	0	-	119024909	119024909	8553170	6	167,139,114,159,799,148,	0,281,1057,2027,2718,4312,
#Partially deleted in new
chr11	119024909	119030888	chr11:119024909-119030888	0	-	119024909	119024909	8553170	11	167,139,66,114,86,159,245,233,343,188,40,	0,281,782,1057,1693,2027,2718,3284,4312,5638,5939,
#Partially deleted in new
chr11	119024909	119029369	chr11:119024909-119029369	0	-	119024909	119024909	8553170	8	167,139,114,183,159,245,233,148,	0,281,1057,1596,2027,2718,3284,4312,
#Partially deleted in new
chr11	119025151	119029387	chr11:119025151-119029387	0	-	119025151	119025151	8553170	5	178,114,159,233,166,	0,815,1785,3042,4070,
#Partially deleted in new
chr11	119026665	119029564	chr11:119026665-119029564	0	-	119026665	119026665	8553170	5	430,245,233,100,343,	0,962,1528,2069,2556,
#Partially deleted in new
chr11	119026953	119029564	chr11:119026953-119029564	0	-	119026953	119026953	8553170	3	142,245,343,	0,674,2268,
#Partially deleted in new
chr11	119027811	119029664	chr11:119027811-119029664	0	-	119027811	119027811	8553170	2	615,443,	0,1410,
#Partially deleted in new
chr11	119028240	119029940	chr11:119028240-119029940	0	-	119028240	119028240	8553170	3	186,343,25,	0,981,1675,
#Deleted in new
chr11	119044187	119045493	chr11:119044187-119045493	3	+	119044187	119044187	8553170	2	558,109,	0,1197,
#Partially deleted in new
chr11	119044188	119057137	chr11:119044188-119057137	3	-	119045592	119056160	789624	26	1466,51,51,241,85,134,123,88,173,186,80,61,139,188,133,83,135,193,116,182,77,155,79,94,98,118,	0,1592,2228,2373,3545,3758,4059,4287,4525,4829,5367,5588,6846,7249,7630,7901,8106,8448,9932,10305,10795,10996,11304,11561,11881,12831,
#Partially deleted in new
chr11	119044190	119057194	chr11:119044190-119057194	1	-	119045467	119056160	789624	8	1035,49,17,155,79,94,98,42,	0,1236,10853,10994,11302,11559,11879,12962,
#Partially deleted in new
chr11	119044190	119057112	chr11:119044190-119057112	1	-	119045113	119056160	789624	18	965,186,80,61,139,188,133,83,135,193,116,182,77,155,79,94,98,93,	0,4827,5365,5586,6844,7247,7628,7899,8104,8446,9930,10303,10793,10994,11302,11559,11879,12829,
#Partially deleted in new
chr11	119044191	119057157	chr11:119044191-119057157	1	-	119045592	119056160	789624	25	1463,51,51,241,85,134,123,88,173,80,61,139,188,133,83,135,193,116,182,77,155,79,94,98,138,	0,1589,2225,2370,3542,3755,4056,4284,4522,5364,5585,6843,7246,7627,7898,8103,8445,9929,10302,10792,10993,11301,11558,11878,12828,
#Partially deleted in new
chr11	119045113	119057137	chr11:119045113-119057137	1	-	119045113	119056160	789624	19	37,8,186,80,61,139,188,133,83,135,193,116,182,77,155,79,94,98,118,	0,1630,3904,4442,4663,5921,6324,6705,6976,7181,7523,9007,9380,9870,10071,10379,10636,10956,11906,
#Partially deleted in new
chr11	119045310	119057134	chr11:119045310-119057134	1	-	119045592	119056160	789624	26	344,51,51,241,85,134,123,88,173,80,61,139,188,133,83,135,193,116,182,77,155,79,94,98,140,115,	0,470,1106,1251,2423,2636,2937,3165,3403,4245,4466,5724,6127,6508,6779,6984,7326,8810,9183,9673,9874,10182,10439,10759,10968,11709,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	119047169	119048106	chr11:119047169-119048106	0	-	119047169	119047169	8553170	2	649,160,	0,777,
#Deleted in new
chr11	119048356	119048825	chr11:119048356-119048825	0	-	119048356	119048356	8553170	2	207,112,	0,357,
#Partially deleted in new
chr11	119048359	119057139	chr11:119048359-119057139	0	-	119055545	119056160	789624	19	11,88,173,353,80,61,139,188,133,83,135,193,116,182,77,155,79,98,120,	0,116,354,658,1196,1417,2675,3078,3459,3730,3935,4277,5761,6134,6624,6825,7133,7710,8660,
#Partially deleted in new
chr11	119049039	119056850	chr11:119049039-119056850	0	-	119049039	119056160	789624	17	164,80,61,139,188,133,83,135,193,116,182,77,155,79,94,98,46,	0,516,737,1995,2398,2779,3050,3255,3597,5081,5454,5944,6145,6453,6710,7030,7765,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	119052372	119055418	chr11:119052372-119055418	0	-	119052372	119052372	8553170	4	1864,182,77,234,	0,2121,2611,2812,
#Partially deleted in new
chr11	119054498	119057105	chr11:119054498-119057105	0	-	119054498	119056160	789624	7	177,77,155,79,94,98,31,	0,485,686,994,1251,1571,2576,
#Partially deleted in new
chr11	119054536	119057024	chr11:119054536-119057024	0	-	119054536	119056160	789624	7	139,77,155,79,94,98,220,	0,447,648,956,1213,1533,2268,
#Partially deleted in new
chr11	119054584	119057202	chr11:119054584-119057202	0	-	119055545	119056160	789624	6	91,77,155,79,98,50,	0,399,600,908,1485,2568,
#Deleted in new
chr11	119055015	119057137	chr11:119055015-119057137	0	-	119055015	119056160	789624	6	45,155,79,94,98,111,	0,169,477,734,1054,2011,
#Deleted in new
chr11	119055022	119056910	chr11:119055022-119056910	0	-	119055022	119055022	8553170	5	317,79,94,98,106,	0,470,727,1047,1782,
#Deleted in new
chr11	119055032	119057175	chr11:119055032-119057175	0	-	119055032	119056160	789624	6	28,155,79,94,98,175,	0,152,460,717,1037,1968,
#Deleted in new
chr11	119055154	119057112	chr11:119055154-119057112	0	-	119055154	119055154	8553170	5	185,79,94,98,93,	0,338,595,915,1865,
#Deleted in new
chr11	119055201	119057134	chr11:119055201-119057134	0	-	119055201	119055201	8553170	3	138,351,60,	0,291,1873,
#Deleted in new
chr11	119055295	119057129	chr11:119055295-119057129	0	-	119055295	119056160	789624	6	44,79,94,98,127,110,	0,197,454,774,983,1724,
#Deleted in new
chr11	119055327	119057142	chr11:119055327-119057142	0	-	119055327	119056160	789624	6	12,79,94,98,140,68,	0,165,422,742,951,1747,
#Deleted in new
chr11	119055488	119057134	chr11:119055488-119057134	0	-	119055488	119055488	8553170	3	355,98,115,	0,581,1531,
#Deleted in new
chr11	119065262	119065677	chr11:119065262-119065677	3	-	119065262	119065262	8553170	1	415,	0,
#Deleted in new
chr11	119067373	119067698	chr11:119067373-119067698	3	-	119067373	119067373	8553170	1	325,	0,
#Partially deleted in new
chr11	119067691	119081978	chr11:119067691-119081978	3	+	119067823	119081623	789624	16	319,149,136,164,248,202,152,187,147,189,162,140,203,172,223,520,	0,1504,1750,2542,3904,5506,6108,9205,9809,10186,10481,10873,11103,11437,13400,13767,
#Partially deleted in new
chr11	119067820	119081967	chr11:119067820-119081967	1	+	119068068	119081623	789624	16	382,172,136,164,248,202,152,187,147,189,162,140,203,172,223,509,	0,1352,1621,2413,3775,5377,5979,9076,9680,10057,10352,10744,10974,11308,13271,13638,
#Partially deleted in new
chr11	119067822	119081964	chr11:119067822-119081964	0	+	119067822	119067822	8553170	13	190,147,164,248,202,152,187,147,189,825,172,223,506,	0,1375,2411,3773,5375,5977,9074,9678,10055,10350,11306,13269,13636,
#Partially deleted in new
chr11	119069532	119081964	chr11:119069532-119081964	1	+	119077937	119081885	789624	15	45,164,248,202,152,187,147,189,162,140,203,172,223,108,397,	0,701,2063,3665,4267,7364,7968,8345,8640,9032,9262,9596,11559,11926,12035,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	119069552	119070784	chr11:119069552-119070784	0	+	119069552	119069552	8553170	2	25,551,	0,681,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	119072031	119076928	chr11:119072031-119076928	0	+	119072031	119072031	8553170	2	1920,32,	0,4865,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	119073821	119077647	chr11:119073821-119077647	0	+	119073821	119077647	789624	3	130,265,147,	0,2997,3679,
#Partially deleted in new
chr11	119077019	119078329	chr11:119077019-119078329	0	+	119077019	119077019	8553170	4	64,147,189,185,	0,481,858,1125,
#Partially deleted in new
chr11	119079181	119081965	chr11:119079181-119081965	0	+	119079181	119079181	8553170	2	119,507,	0,2277,
#Partially deleted in new
chr11	119084865	119089739	chr11:119084865-119089739	0	+	119084865	119084865	8553170	5	201,54,73,56,57,	0,3389,3769,4351,4817,
#Partially deleted in new
chr11	119084880	119092500	chr11:119084880-119092500	0	+	119085033	119088793	789624	10	186,54,214,50,56,78,78,76,114,376,	0,3374,3754,4201,4336,4802,5109,5309,6532,7244,
#Partially deleted in new
chr11	119084880	119088975	chr11:119084880-119088975	0	+	119084880	119084880	8553170	3	186,54,341,	0,3374,3754,
#Partially deleted in new
chr11	119084882	119093547	chr11:119084882-119093547	3	+	119085033	119093283	0	14	184,54,73,50,56,78,78,76,114,39,120,54,87,438,	0,3372,3752,4199,4334,4800,5107,5307,6530,7242,7521,7875,8052,8227,
#Partially deleted in new
chr11	119084882	119093512	chr11:119084882-119093512	1	+	119085033	119093283	0	14	184,54,73,32,56,78,78,76,114,39,120,54,87,403,	0,3372,3752,4217,4334,4800,5107,5307,6530,7242,7521,7875,8052,8227,
#Partially deleted in new
chr11	119084884	119093516	chr11:119084884-119093516	1	+	119088272	119093283	0	14	273,54,73,50,56,78,78,76,114,39,120,54,87,407,	0,3370,3750,4197,4332,4798,5105,5305,6528,7240,7519,7873,8050,8225,
#Partially deleted in new
chr11	119084884	119093546	chr11:119084884-119093546	1	+	119088272	119093283	0	13	273,54,73,50,56,78,78,76,114,39,54,87,437,	0,3370,3750,4197,4332,4798,5105,5305,6528,7240,7873,8050,8225,
#Partially deleted in new
chr11	119084887	119090046	chr11:119084887-119090046	0	+	119084887	119084887	8553170	7	179,54,73,50,56,93,57,	0,3367,3747,4194,4329,4795,5102,
#Partially deleted in new
chr11	119084899	119092163	chr11:119084899-119092163	0	+	119085033	119092163	789624	9	167,54,73,50,56,78,76,114,39,	0,3355,3735,4182,4317,5090,5290,6513,7225,
#Partially deleted in new
chr11	119084906	119091541	chr11:119084906-119091541	0	+	119085033	119088702	789624	8	251,54,214,56,78,78,76,129,	0,3348,3728,4310,4776,5083,5283,6506,
#Partially deleted in new
chr11	119084908	119093296	chr11:119084908-119093296	0	+	119084908	119084908	8553170	12	158,497,56,78,78,76,114,39,120,54,87,187,	0,3726,4308,4774,5081,5281,6504,7216,7495,7849,8026,8201,
#Partially deleted in new
chr11	119084910	119092487	chr11:119084910-119092487	0	+	119088272	119092487	789624	12	156,83,54,73,50,56,78,78,76,114,39,84,	0,900,3344,3724,4171,4306,4772,5079,5279,6502,7214,7493,
#Partially deleted in new
chr11	119084913	119093548	chr11:119084913-119093548	1	+	119085033	119093283	0	13	153,54,73,50,56,78,78,76,114,39,54,87,439,	0,3341,3721,4168,4303,4769,5076,5276,6499,7211,7844,8021,8196,
#Partially deleted in new
chr11	119084914	119091540	chr11:119084914-119091540	0	+	119085033	119088793	789624	8	152,214,50,56,78,78,76,128,	0,3720,4167,4302,4768,5075,5275,6498,
#Partially deleted in new
chr11	119084929	119093533	chr11:119084929-119093533	1	+	119085033	119093283	789624	12	137,73,50,56,78,78,76,114,120,54,87,424,	0,3705,4152,4287,4753,5060,5260,6483,7474,7828,8005,8180,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	119084998	119092001	chr11:119084998-119092001	0	+	119085033	119089708	8553170	7	68,32,56,78,78,76,141,	0,4101,4218,4684,4991,5191,6862,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	119085030	119091993	chr11:119085030-119091993	0	+	119085030	119085030	8553170	8	36,73,50,56,78,78,76,133,	0,3604,4051,4186,4652,4959,5159,6830,
#Partially deleted in new
chr11	119085221	119093512	chr11:119085221-119093512	1	+	119088272	119093283	8553170	14	672,54,73,32,56,78,78,76,114,39,120,54,87,403,	0,3033,3413,3878,3995,4461,4768,4968,6191,6903,7182,7536,7713,7888,
#Partially deleted in new
chr11	119085243	119093501	chr11:119085243-119093501	0	+	119085243	119085243	8553170	12	539,497,56,78,78,76,114,39,120,54,87,392,	0,3391,3973,4439,4746,4946,6169,6881,7160,7514,7691,7866,
#Partially deleted in new
chr11	119085289	119092950	chr11:119085289-119092950	0	+	119085289	119085289	8553170	12	250,54,73,50,56,78,78,76,114,399,54,16,	0,2965,3345,3792,3927,4393,4700,4900,6123,6835,7468,7645,
#Partially deleted in new
chr11	119087502	119093549	chr11:119087502-119093549	1	+	119088272	119093283	789624	14	576,54,73,50,56,78,78,76,114,39,120,54,87,440,	0,752,1132,1579,1714,2180,2487,2687,3910,4622,4901,5255,5432,5607,
#Partially deleted in new
chr11	119087982	119091526	chr11:119087982-119091526	0	+	119088272	119091526	789624	9	96,134,73,50,56,78,78,76,114,	0,192,652,1099,1234,1700,2007,2207,3430,
#Partially deleted in new
chr11	119087983	119092256	chr11:119087983-119092256	0	+	119087983	119087983	8553170	10	95,130,73,50,56,78,78,76,114,132,	0,195,651,1098,1233,1699,2006,2206,3429,4141,
#Partially deleted in new
chr11	119087986	119093549	chr11:119087986-119093549	1	+	119088272	119093283	0	14	92,54,73,50,56,78,78,76,114,39,120,54,87,440,	0,268,648,1095,1230,1696,2003,2203,3426,4138,4417,4771,4948,5123,
#Partially deleted in new
chr11	119087986	119093518	chr11:119087986-119093518	0	+	119087986	119087986	8553170	12	322,73,50,56,78,78,76,114,399,54,87,409,	0,648,1095,1230,1696,2003,2203,3426,4138,4771,4948,5123,
#Partially deleted in new
chr11	119087986	119093547	chr11:119087986-119093547	0	+	119087986	119087986	8553170	11	92,54,73,50,56,385,76,114,687,87,438,	0,268,648,1095,1230,1696,2203,3426,4138,4948,5123,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	119087986	119092163	chr11:119087986-119092163	0	+	119088272	119091171	8553170	10	92,54,73,50,56,78,78,76,94,39,	0,268,648,1095,1230,1696,2003,2203,3176,4138,
#Partially deleted in new
chr11	119087994	119093547	chr11:119087994-119093547	1	+	119088272	119093283	8553170	14	84,130,73,50,56,78,78,76,114,39,120,54,87,438,	0,184,640,1087,1222,1688,1995,2195,3418,4130,4409,4763,4940,5115,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	119088253	119091641	chr11:119088253-119091641	0	+	119088253	119088253	8553170	8	55,73,50,56,78,78,76,229,	0,381,828,963,1429,1736,1936,3159,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	119091537	119093290	chr11:119091537-119093290	0	+	119091537	119091537	8553170	3	1274,87,181,	0,1397,1572,
#Deleted in new
chr11	119092610	119093543	chr11:119092610-119093543	0	+	119092610	119092610	8553170	2	411,434,	0,499,
#Deleted in new
chr11	119093853	119095467	chr11:119093853-119095467	3	-	119094962	119095394	0	1	1614,	0,
#Deleted in new
chr11	119093878	119095449	chr11:119093878-119095449	0	-	119094962	119095394	0	2	383,990,	0,581,
#Partially deleted in new
chr11	119096502	119108331	chr11:119096502-119108331	3	-	119096997	119101655	0	11	561,156,88,189,85,147,214,121,283,245,1185,	0,639,961,1352,1900,3759,4127,4515,4992,5601,10644,
#Partially deleted in new
chr11	119096506	119102142	chr11:119096506-119102142	1	-	119096997	119101655	0	9	557,156,88,189,85,147,214,121,648,	0,635,957,1348,1896,3755,4123,4511,4988,
#Partially deleted in new
chr11	119096509	119101878	chr11:119096509-119101878	0	-	119100830	119101655	789624	8	554,156,88,189,85,147,214,384,	0,632,954,1345,1893,3752,4120,4985,
#Partially deleted in new
chr11	119096510	119100409	chr11:119096510-119100409	0	-	119096510	119096510	8553170	2	1977,148,	0,3751,
#Partially deleted in new
chr11	119096510	119102142	chr11:119096510-119102142	0	-	119096510	119096510	8553170	7	553,156,88,189,85,147,1125,	0,631,953,1344,1892,3751,4507,
#Partially deleted in new
chr11	119096548	119101860	chr11:119096548-119101860	0	-	119100871	119101655	789624	7	515,156,85,147,248,121,366,	0,593,1854,3713,4081,4469,4946,
#Partially deleted in new
chr11	119096594	119101837	chr11:119096594-119101837	1	-	119096997	119101655	789624	9	469,156,88,189,85,147,121,121,343,	0,547,869,1260,1808,3667,4035,4423,4900,
#Partially deleted in new
chr11	119096595	119100408	chr11:119096595-119100408	0	-	119097062	119100408	789624	3	468,85,147,	0,1807,3666,
#Partially deleted in new
chr11	119096595	119100408	chr11:119096595-119100408	0	-	119097451	119100408	789624	6	468,156,107,189,85,147,	0,546,849,1259,1807,3666,
#Partially deleted in new
chr11	119096596	119101856	chr11:119096596-119101856	0	-	119100800	119101655	789624	9	467,156,88,189,85,147,198,121,362,	0,545,867,1258,1806,3665,4033,4421,4898,
#Partially deleted in new
chr11	119096957	119102371	chr11:119096957-119102371	0	-	119097519	119102371	789624	8	106,156,88,71,85,147,214,132,	0,184,506,897,1445,3304,3672,5282,
#Partially deleted in new
chr11	119097139	119101824	chr11:119097139-119101824	0	-	119100778	119101655	789624	7	158,88,189,85,147,198,330,	0,324,715,1263,3122,3490,4355,
#Partially deleted in new
chr11	119097262	119101128	chr11:119097262-119101128	0	-	119097262	119097262	8553170	4	289,85,147,499,	0,1140,2999,3367,
#Deleted in new
chr11	119097336	119098435	chr11:119097336-119098435	0	-	119097336	119097336	8553170	3	215,189,33,	0,518,1066,
#Partially deleted in new
chr11	119097959	119101023	chr11:119097959-119101023	0	-	119097959	119097959	8553170	4	84,85,147,394,	0,443,2302,2670,
#Partially deleted in new
chr11	119098073	119100916	chr11:119098073-119100916	0	-	119098073	119098073	8553170	2	414,655,	0,2188,
#Deleted in new
chr11	119100628	119101832	chr11:119100628-119101832	0	-	119100628	119100628	8553170	3	215,30,338,	0,389,866,
#Deleted in new
chr11	119100628	119101860	chr11:119100628-119101860	0	-	119100628	119100628	8553170	2	215,843,	0,389,
#Deleted in new
chr11	119100929	119101853	chr11:119100929-119101853	0	-	119100929	119100929	8553170	2	209,359,	0,565,
#Partially deleted in new
chr11	119102197	119107696	chr11:119102197-119107696	0	+	119102197	119102197	8553170	2	178,322,	0,5177,
#Deleted in new
chr11	119106714	119107546	chr11:119106714-119107546	0	+	119106714	119106714	8553170	2	60,476,	0,356,
#Deleted in new
chr11	119106741	119107576	chr11:119106741-119107576	0	+	119106741	119106741	8553170	2	137,506,	0,329,
#Deleted in new
chr11	119106749	119107696	chr11:119106749-119107696	0	+	119106749	119106749	8553170	2	377,184,	0,763,
#Deleted in new
chr11	119106941	119107758	chr11:119106941-119107758	0	+	119106941	119106941	8553170	2	185,384,	0,433,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr11	119107382	119118544	chr11:119107382-119118544	3	+	119107741	119116256	0	14	713,96,120,111,117,112,109,65,128,175,102,137,286,2500,	0,2721,3178,3464,3669,3880,4138,4945,5099,5317,6228,6469,6697,8662,
#Partially deleted in new
chr11	119107483	119117121	chr11:119107483-119117121	1	+	119107741	119116256	789624	14	612,96,120,111,117,112,109,65,128,175,102,134,286,1077,	0,2620,3077,3363,3568,3779,4037,4844,4998,5216,6127,6371,6596,8561,
#Partially deleted in new
chr11	119110102	119114134	chr11:119110102-119114134	0	+	119110102	119110102	8553170	9	97,120,111,117,112,109,65,76,280,	0,458,744,949,1160,1418,2225,3534,3752,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	119110586	119117121	chr11:119110586-119117121	0	+	119110586	119110586	8553170	7	371,117,112,872,128,1289,3042,	0,465,676,934,1895,2113,3493,
#Partially deleted in new
chr11	119111056	119117121	chr11:119111056-119117121	0	+	119111056	119116047	789624	10	112,112,109,65,128,175,102,134,286,1097,	0,206,464,1271,1425,1643,2554,2798,3023,4968,
#Deleted in new
chr11	119111560	119113289	chr11:119111560-119113289	0	+	119111560	119111560	8553170	2	1049,590,	0,1139,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	119121586	119136044	chr11:119121586-119136044	3	+	119126944	119134498	789624	10	53,191,230,112,153,78,121,139,125,1961,	0,5348,9138,9948,10243,10909,11074,11277,11508,12497,
#Partially deleted in new
chr11	119121590	119127458	chr11:119121590-119127458	0	+	119121590	119121590	8553170	2	49,524,	0,5344,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	119121591	119131536	chr11:119121591-119131536	0	+	119121591	119121591	8553170	3	48,191,812,	0,5343,9133,
#Partially deleted in new
chr11	119121608	119130843	chr11:119121608-119130843	0	+	119126944	119130843	789624	4	31,231,191,119,	0,174,5326,9116,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	119121608	119131600	chr11:119121608-119131600	0	+	119121608	119121608	8553170	3	31,230,487,	0,9116,9505,
#Partially deleted in new
chr11	119121609	119131997	chr11:119121609-119131997	0	+	119121609	119121609	8553170	4	30,230,112,168,	0,9115,9925,10220,
#Partially deleted in new
chr11	119121615	119134314	chr11:119121615-119134314	1	+	119126944	119134142	789624	10	24,191,230,112,153,78,121,139,125,293,	0,5319,9109,9919,10214,10880,11045,11248,11479,12406,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	119123732	119127106	chr11:119123732-119127106	0	+	119126944	119127106	789624	2	504,172,	0,3202,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	119123987	119131231	chr11:119123987-119131231	0	+	119123987	119123987	8553170	3	3138,230,118,	0,6737,7126,
#Partially deleted in new
chr11	119129859	119133173	chr11:119129859-119133173	0	+	119129859	119129859	8553170	7	1095,112,153,78,121,139,79,	0,1675,1970,2636,2801,3004,3235,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	119131209	119131927	chr11:119131209-119131927	0	+	119131209	119131209	8553170	2	437,98,	0,620,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	119131438	119135054	chr11:119131438-119135054	0	+	119131438	119131438	8553170	5	1135,121,139,125,971,	0,1222,1425,1656,2645,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	119132838	119133898	chr11:119132838-119133898	0	+	119132838	119132838	8553170	2	164,804,	0,256,
#Partially deleted in new
chr11	119149011	119162653	chr11:119149011-119162653	3	+	119149965	119161106	789624	15	352,250,118,133,51,146,124,115,143,99,169,101,159,119,1773,	0,942,5014,5248,5513,5758,7317,7552,7860,9222,9545,9817,11215,11526,11869,
#Partially deleted in new
chr11	119149252	119154359	chr11:119149252-119154359	0	+	119149965	119154359	789624	4	28,250,118,100,	0,701,4773,5007,
#Partially deleted in new
chr11	119149512	119161436	chr11:119149512-119161436	1	+	119149965	119161106	789624	15	176,250,118,133,51,146,124,115,143,99,169,101,159,119,556,	0,441,4513,4747,5012,5257,6816,7051,7359,8721,9044,9316,10714,11025,11368,
#Partially deleted in new
chr11	119149895	119161648	chr11:119149895-119161648	1	+	119149965	119161106	789624	14	308,118,133,51,146,124,115,143,99,169,101,159,119,768,	0,4130,4364,4629,4874,6433,6668,6976,8338,8661,8933,10331,10642,10985,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	119152874	119160371	chr11:119152874-119160371	0	+	119152874	119152874	8553170	10	1269,133,51,146,124,115,143,492,101,145,	0,1385,1650,1895,3454,3689,3997,5359,5954,7352,
#Partially deleted in new
chr11	119155629	119158495	chr11:119155629-119158495	0	+	119155629	119155629	8553170	3	1049,143,262,	0,1242,2604,
#Partially deleted in new
chr11	119166567	119173705	chr11:119166567-119173705	0	+	119166567	119166567	8553170	4	99,118,89,227,	0,4788,6333,6911,
#Partially deleted in new
chr11	119168187	119173703	chr11:119168187-119173703	0	+	119171403	119173703	789624	5	260,118,70,89,225,	0,3168,4168,4713,5291,
#Partially deleted in new
chr11	119168333	119184014	chr11:119168333-119184014	3	+	119171403	119183439	0	10	114,118,70,89,620,822,596,87,252,897,	0,3022,4022,4567,5145,6119,11359,12837,13760,14784,
#Partially deleted in new
chr11	119168336	119173662	chr11:119168336-119173662	0	+	119171403	119173662	789624	5	97,118,70,89,184,	0,3019,4019,4564,5142,
#Partially deleted in new
chr11	119168407	119173630	chr11:119168407-119173630	0	+	119171403	119173630	789624	5	115,118,70,89,152,	0,2948,3948,4493,5071,
#Partially deleted in new
chr11	119168712	119173662	chr11:119168712-119173662	0	+	119168712	119168712	8553170	4	330,118,89,184,	0,2643,4188,4766,
#Partially deleted in new
chr11	119168727	119184012	chr11:119168727-119184012	1	+	119171403	119183439	0	10	167,118,70,89,620,822,596,87,252,895,	0,2628,3628,4173,4751,5725,10965,12443,13366,14390,
#Partially deleted in new
chr11	119168728	119184014	chr11:119168728-119184014	1	+	119171403	119183439	0	10	193,118,70,89,620,822,596,87,252,897,	0,2627,3627,4172,4750,5724,10964,12442,13365,14389,
#Partially deleted in new
chr11	119168741	119181357	chr11:119168741-119181357	0	+	119168741	119168741	8553170	7	153,118,89,620,822,596,187,	0,2614,4159,4737,5711,10951,12429,
#Partially deleted in new
chr11	119168763	119184016	chr11:119168763-119184016	1	+	119171403	119183439	0	10	539,118,70,89,620,822,596,87,252,899,	0,2592,3592,4137,4715,5689,10929,12407,13330,14354,
#Partially deleted in new
chr11	119169146	119173692	chr11:119169146-119173692	0	+	119169146	119169146	8553170	4	156,118,89,214,	0,2209,3754,4332,
#Partially deleted in new
chr11	119171355	119184016	chr11:119171355-119184016	1	+	119171403	119183980	0	9	118,70,89,620,822,596,87,252,196,	0,1000,1545,2123,3097,8337,9815,10738,12465,
#Partially deleted in new
chr11	119173015	119175040	chr11:119173015-119175040	0	+	119173015	119173015	8553170	2	1083,588,	0,1437,
#Partially deleted in new
chr11	119177776	119180198	chr11:119177776-119180198	0	+	119177776	119177776	8553170	2	180,506,	0,1916,
#Deleted in new
chr11	119185456	119186557	chr11:119185456-119186557	0	+	119185456	119185456	8553170	3	54,104,466,	0,392,635,
#Partially deleted in new
chr11	119185474	119189760	chr11:119185474-119189760	1	+	119186162	119189492	789624	11	36,28,150,212,190,137,205,197,228,201,298,	0,450,617,1004,1795,2089,2465,2880,3165,3530,3988,
#Deleted in new
chr11	119185474	119186610	chr11:119185474-119186610	0	+	119185474	119185474	8553170	3	36,28,519,	0,450,617,
#Partially deleted in new
chr11	119185474	119190190	chr11:119185474-119190190	0	+	119185474	119185474	8553170	10	36,104,74,212,190,137,612,228,201,728,	0,374,617,1004,1795,2089,2465,3165,3530,3988,
#Partially deleted in new
chr11	119185474	119187658	chr11:119185474-119187658	0	+	119185474	119185474	8553170	6	36,31,74,212,190,95,	0,447,617,1004,1795,2089,
#Partially deleted in new
chr11	119185474	119189949	chr11:119185474-119189949	0	+	119185474	119185474	8553170	8	36,28,74,212,190,1304,201,487,	0,450,617,1004,1795,2089,3530,3988,
#Partially deleted in new
chr11	119185474	119190223	chr11:119185474-119190223	1	+	119186162	119189492	0	9	478,599,190,137,205,197,228,201,761,	0,617,1795,2089,2465,2880,3165,3530,3988,
#Partially deleted in new
chr11	119185474	119189946	chr11:119185474-119189946	0	+	119185474	119185474	8553170	8	36,28,599,190,137,612,566,484,	0,450,617,1795,2089,2465,3165,3988,
#Partially deleted in new
chr11	119185479	119190211	chr11:119185479-119190211	3	+	119185494	119189492	0	11	31,28,74,212,190,137,205,197,228,201,749,	0,445,612,999,1790,2084,2460,2875,3160,3525,3983,
#Partially deleted in new
chr11	119185479	119188030	chr11:119185479-119188030	0	+	119185494	119187593	789624	6	31,28,74,212,137,91,	0,445,612,999,2084,2460,
#Deleted in new
chr11	119185482	119186414	chr11:119185482-119186414	0	+	119185482	119185482	8553170	3	146,104,323,	0,366,609,
#Partially deleted in new
chr11	119185485	119190211	chr11:119185485-119190211	1	+	119185494	119189492	0	11	25,28,74,212,190,95,205,197,228,201,749,	0,439,606,993,1784,2078,2454,2869,3154,3519,3977,
#Partially deleted in new
chr11	119185485	119188137	chr11:119185485-119188137	0	+	119185485	119185485	8553170	5	143,31,75,137,198,	0,436,1130,2078,2454,
#Deleted in new
chr11	119185486	119186466	chr11:119185486-119186466	0	+	119185486	119185486	8553170	2	24,542,	0,438,
#Partially deleted in new
chr11	119189637	119195487	chr11:119189637-119195487	1	-	119190299	119195487	789624	6	815,131,93,120,72,64,	0,1072,3513,4128,5285,5786,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	119190249	119196769	chr11:119190249-119196769	0	-	119190249	119190249	8553170	7	203,131,735,72,76,202,282,	0,460,2901,4673,5174,5549,6238,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	119190255	119196769	chr11:119190255-119196769	3	-	119190299	119195487	789624	8	197,131,93,120,72,76,202,282,	0,454,2895,3510,4667,5168,5543,6232,
#Deleted in new
chr11	119195180	119195874	chr11:119195180-119195874	0	-	119195180	119195180	8553170	2	319,76,	0,618,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr11	119206275	119308149	chr11:119206275-119308149	3	+	119206417	119299781	0	16	337,248,147,157,122,138,88,132,204,132,378,95,117,98,183,8655,	0,26172,65459,67592,68556,69721,71481,71890,72234,78693,78913,81576,90642,91108,92082,93219,
#Partially deleted in new
chr11	119206297	119308147	chr11:119206297-119308147	1	+	119206417	119306361	789624	18	315,248,147,157,122,138,88,132,204,132,378,95,117,98,183,141,93,669,	0,26150,65437,67570,68534,69699,71459,71868,72212,78671,78891,81554,90620,91086,92060,93197,99990,101181,
#Partially deleted in new
chr11	119206299	119301887	chr11:119206299-119301887	1	+	119206417	119299781	789624	15	313,248,147,157,122,138,88,132,204,378,95,117,98,183,2393,	0,26148,65435,67568,68532,69697,71457,71866,72210,78889,81552,90618,91084,92058,93195,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr11	119206423	119313926	chr11:119206423-119313926	0	+	119206423	119313506	789624	17	189,248,147,157,122,138,88,132,204,132,378,95,117,98,183,93,509,	0,26024,65311,67444,68408,69573,71333,71742,72086,78545,78765,81428,90494,90960,91934,93071,106994,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	119289561	119289677	chr11:119289561-119289677	3	-	119289561	119289561	8553170	1	116,	0,
#Partially deleted in new
chr11	119298371	119308147	chr11:119298371-119308147	0	+	119298371	119308077	789624	3	169,93,78,	0,1123,9698,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr11	119308528	119317116	chr11:119308528-119317116	3	-	119309885	119317101	789624	16	1387,118,148,96,142,122,142,119,163,122,180,88,71,208,125,82,	0,1820,2227,2561,2751,3001,3279,3523,3737,3998,4241,5960,6150,6304,6610,8506,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr11	119308971	119317130	chr11:119308971-119317130	0	-	119308971	119308971	8553170	14	944,118,666,122,142,119,163,122,180,88,71,208,125,96,	0,1377,1784,2558,2836,3080,3294,3555,3798,5517,5707,5861,6167,8063,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr11	119308985	119318377	chr11:119308985-119318377	0	-	119308985	119308985	8553170	16	520,293,118,430,142,122,142,119,163,122,1807,71,208,125,203,280,	0,637,1363,1770,2294,2544,2822,3066,3280,3541,3784,5693,5847,6153,8727,9112,
#Deleted in new
chr11	119309886	119311118	chr11:119309886-119311118	0	-	119309886	119309886	8553170	3	29,148,29,	0,869,1203,
#Deleted in new
chr11	119309986	119311381	chr11:119309986-119311381	0	-	119309986	119309986	8553170	5	258,118,148,96,102,	0,362,769,1103,1293,
#Partially deleted in new
chr11	119312871	119317130	chr11:119312871-119317130	0	-	119312871	119312871	8553170	5	78,88,71,208,96,	0,1617,1807,1961,4163,
#Deleted in new
chr11	119312949	119313012	chr11:119312949-119313012	3	-	119312949	119312949	5263520	1	63,	0,
#Deleted in new
chr11	119314501	119316066	chr11:119314501-119316066	0	-	119314501	119314501	8553170	5	75,71,208,125,84,	0,177,331,637,1481,
#Deleted in new
chr11	119314504	119316842	chr11:119314504-119316842	0	-	119314504	119314504	8553170	5	72,71,208,125,281,	0,174,328,634,2057,
#Deleted in new
chr11	119314615	119317129	chr11:119314615-119317129	0	-	119314615	119314615	8553170	4	134,208,125,95,	0,217,523,2419,
#Deleted in new
chr11	119314684	119317130	chr11:119314684-119317130	0	-	119314684	119314684	8553170	5	65,208,125,94,96,	0,148,454,738,2350,
#Deleted in new
chr11	119314691	119317130	chr11:119314691-119317130	0	-	119314691	119314691	8553170	4	58,199,125,96,	0,141,447,2343,
#Deleted in new
chr11	119314693	119317130	chr11:119314693-119317130	0	-	119314693	119314693	8553170	5	56,208,125,78,96,	0,139,445,1289,2341,
#Deleted in new
chr11	119314721	119317130	chr11:119314721-119317130	0	-	119314721	119314721	8553170	3	28,431,96,	0,111,2313,
#Deleted in new
chr11	119314869	119317130	chr11:119314869-119317130	0	-	119314869	119314869	8553170	4	171,125,175,96,	0,269,1113,2165,
#Deleted in new
chr11	119314886	119318891	chr11:119314886-119318891	0	-	119314886	119314886	8553170	4	154,125,203,87,	0,252,2826,3918,
#Deleted in new
chr11	119314892	119321521	chr11:119314892-119321521	0	-	119314892	119314892	8553170	4	148,125,203,433,	0,246,2820,6196,
#Deleted in new
chr11	119314989	119315820	chr11:119314989-119315820	0	-	119314989	119314989	8553170	3	51,125,398,	0,149,433,
#Deleted in new
chr11	119323292	119323409	chr11:119323292-119323409	3	-	119323292	119323292	8553170	1	117,	0,
#Deleted in new
chr11	119334526	119337313	chr11:119334526-119337313	3	+	119335122	119336424	789624	1	2787,	0,
#Deleted in new
chr11	119336248	119337309	chr11:119336248-119337309	3	-	119336248	119336248	8553170	2	245,262,	0,799,
#Deleted in new
chr11	119338938	119340883	chr11:119338938-119340883	3	-	119339330	119340397	0	3	910,257,189,	0,1245,1756,
#Partially deleted in new
chr11	119338941	119346673	chr11:119338941-119346673	3	-	119341547	119346513	789624	15	907,257,1078,128,132,131,149,77,126,131,214,156,114,103,214,	0,1242,1753,2915,3654,3931,4874,5373,5690,5932,6478,6831,7104,7330,7518,
#Deleted in new
chr11	119339186	119340567	chr11:119339186-119340567	1	-	119339330	119340397	0	2	662,384,	0,997,
#Deleted in new
chr11	119339369	119340798	chr11:119339369-119340798	0	-	119339369	119339369	8553170	2	479,104,	0,1325,
#Deleted in new
chr11	119339774	119340940	chr11:119339774-119340940	0	-	119339774	119340397	789624	3	74,149,246,	0,517,920,
#Partially deleted in new
chr11	119341422	119346665	chr11:119341422-119346665	1	-	119341547	119346513	789624	10	350,132,131,126,131,214,156,114,103,206,	0,1173,1450,3209,3451,3997,4350,4623,4849,5037,
#Deleted in new
chr11	119341593	119342980	chr11:119341593-119342980	0	-	119341593	119342980	789624	4	179,128,132,126,	0,263,1002,1261,
#Deleted in new
chr11	119344631	119346391	chr11:119344631-119346391	0	-	119344631	119344631	8553170	6	126,131,214,156,114,120,	0,242,788,1141,1414,1640,
#Deleted in new
chr11	119344923	119346617	chr11:119344923-119346617	0	-	119345790	119346513	789624	5	81,214,156,114,158,	0,496,849,1122,1536,
#Deleted in new
chr11	119345776	119346617	chr11:119345776-119346617	0	-	119345776	119345776	8553170	3	152,271,158,	0,269,683,
#Partially deleted in new
chr11	119355214	119381711	chr11:119355214-119381711	1	-	119356834	119381517	0	12	1708,121,108,79,81,104,65,111,112,124,51,239,	0,1972,2268,2542,2766,2934,3558,3809,4016,4322,4969,26258,
#Partially deleted in new
chr11	119355215	119381726	chr11:119355215-119381726	3	-	119356834	119373480	0	13	1707,121,108,79,81,104,65,111,112,124,51,815,254,	0,1971,2267,2541,2765,2933,3557,3808,4015,4321,4968,17491,26257,
#Partially deleted in new
chr11	119356533	119364207	chr11:119356533-119364207	1	-	119356834	119363995	0	12	389,121,108,79,81,104,65,111,112,124,51,359,	0,653,949,1223,1447,1615,2239,2490,2697,3003,3650,7315,
#Partially deleted in new
chr11	119358034	119360214	chr11:119358034-119360214	0	-	119358034	119358034	8553170	6	27,104,65,319,124,31,	0,114,738,989,1502,2149,
#Partially deleted in new
chr11	119358664	119363914	chr11:119358664-119363914	0	-	119358664	119358664	8553170	6	173,111,112,124,51,66,	0,359,566,872,1519,5184,
#Partially deleted in new
chr11	119372705	119381613	chr11:119372705-119381613	3	+	119372705	119372705	8553170	2	653,125,	0,8783,
#Partially deleted in new
chr11	119372977	119376356	chr11:119372977-119376356	0	-	119372977	119373480	789624	2	544,133,	0,3246,
#Partially deleted in new
chr11	119373067	119379115	chr11:119373067-119379115	0	-	119373067	119373480	789624	2	454,109,	0,5939,
#Deleted in new
chr11	119380741	119381581	chr11:119380741-119381581	0	+	119380741	119380741	8553170	2	89,120,	0,720,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	119381777	119409762	chr11:119381777-119409762	1	+	119381777	119381777	8553170	4	131,174,122,262,	0,13203,13764,27723,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	119381809	119500595	chr11:119381809-119500595	1	+	119381809	119381809	789624	4	99,174,167,2046,	0,13171,87999,116740,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	119381809	119526664	chr11:119381809-119526664	3	+	119381809	119381809	8553170	9	99,174,112,172,534,80,95,215,303,	0,13171,127304,128499,139871,140848,141968,142312,144552,
#Partially deleted in new
chr11	119381820	119499233	chr11:119381820-119499233	1	+	119381820	119381820	8553170	3	88,123,684,	0,13211,116729,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	119381834	119475708	chr11:119381834-119475708	1	+	119381834	119381834	8553170	4	74,174,167,349,	0,13146,87974,93525,
#Deleted in new
chr11	119402791	119404088	chr11:119402791-119404088	7	+	119402791	119402791	16724991	1	1297,	0,
#Deleted in new
chr11	119403962	119404227	chr11:119403962-119404227	7	-	119403962	119403962	16724991	1	265,	0,
#Deleted in new
chr11	119417377	119424128	chr11:119417377-119424128	3	-	119419407	119420905	789624	4	2143,336,61,1016,	0,2673,3491,5735,
#Deleted in new
chr11	119417950	119419114	chr11:119417950-119419114	3	+	119417950	119417950	8553170	2	184,448,	0,716,
#Deleted in new
chr11	119418819	119422562	chr11:119418819-119422562	1	-	119419407	119420905	789624	4	701,336,61,952,	0,1231,2049,2791,
#Deleted in new
chr11	119418819	119421246	chr11:119418819-119421246	0	-	119418819	119418819	8553170	1	2427,	0,
#Deleted in new
chr11	119419072	119423172	chr11:119419072-119423172	0	-	119420301	119420905	789624	4	448,328,61,60,	0,978,1796,4040,
#Deleted in new
chr11	119419307	119423172	chr11:119419307-119423172	0	-	119419307	119420905	789624	4	124,336,61,60,	0,743,1561,3805,
#Deleted in new
chr11	119419307	119423172	chr11:119419307-119423172	0	-	119419307	119419307	8553170	3	213,336,60,	0,743,3805,
#Deleted in new
chr11	119419374	119423198	chr11:119419374-119423198	1	-	119419407	119420905	789624	4	146,285,61,86,	0,676,1494,3738,
#Deleted in new
chr11	119419435	119424985	chr11:119419435-119424985	0	-	119419435	119420905	789624	4	85,336,61,88,	0,615,1433,5462,
#Deleted in new
chr11	119419464	119423199	chr11:119419464-119423199	0	-	119419464	119419464	8553170	4	56,398,61,87,	0,586,1404,3648,
#Deleted in new
chr11	119420408	119423201	chr11:119420408-119423201	0	-	119420408	119420408	8553170	2	521,89,	0,2704,
#Deleted in new
chr11	119444990	119445519	chr11:119444990-119445519	7	-	119444990	119444990	16724991	1	529,	0,
#Deleted in new
chr11	119602874	119604306	chr11:119602874-119604306	7	-	119602874	119602874	16724991	1	1432,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	119608422	119659284	chr11:119608422-119659284	3	+	119608422	119608422	8553170	7	117,189,104,104,3494,202,266,	0,22825,28502,28851,31073,45600,50596,
#Partially deleted in new
chr11	119623407	119638200	chr11:119623407-119638200	0	-	119623407	119623407	8553170	3	340,182,67,	0,5687,14726,
#Partially deleted in new
chr11	119638097	119728553	chr11:119638097-119728553	1	-	119638097	119728553	0	8	150,76,148,152,118,303,351,79,	0,633,1767,37061,39004,39457,40317,90377,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	119656310	119656416	chr11:119656310-119656416	3	+	119656310	119656310	8553170	1	106,	0,
#Partially deleted in new
chr11	119660991	119729084	chr11:119660991-119729084	3	-	119664746	119728553	0	6	4306,152,118,303,351,610,	0,14167,16110,16563,17423,67483,
#Deleted in new
chr11	119674381	119675669	chr11:119674381-119675669	0	-	119674381	119674381	8553170	2	266,511,	0,777,
#Partially deleted in new
chr11	119674591	119728553	chr11:119674591-119728553	1	-	119674591	119728553	0	6	56,152,118,303,351,79,	0,567,2510,2963,3823,53883,
#Deleted in new
chr11	119676814	119677601	chr11:119676814-119677601	0	-	119676814	119676814	8553170	2	405,47,	0,740,
#Deleted in new
chr11	119677094	119687357	chr11:119677094-119687357	0	-	119677094	119677094	8553170	4	125,303,351,53,	0,460,1320,10210,
#Partially deleted in new
chr11	119709919	119713925	chr11:119709919-119713925	3	+	119709919	119709919	8553170	3	111,121,327,	0,2972,3679,
#Partially deleted in new
chr11	119729582	119739623	chr11:119729582-119739623	3	+	119729582	119729582	789624	4	224,94,112,93,	0,4074,7224,9948,
#Deleted in new
chr11	119821303	119822129	chr11:119821303-119822129	7	-	119821303	119821303	16724991	1	826,	0,
#Deleted in new
chr11	119988664	119994709	chr11:119988664-119994709	1	-	119988664	119988664	8553170	3	140,223,116,	0,792,5929,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	119988763	119995037	chr11:119988763-119995037	3	-	119988763	119988763	8553170	3	138,176,150,	0,517,6124,
#Partially deleted in new
chr11	120008603	120012158	chr11:120008603-120012158	3	-	120008603	120008603	8553170	2	496,66,	0,3489,
#Partially deleted in new
chr11	120111274	120138453	chr11:120111274-120138453	3	-	120112413	120138031	0	9	1202,77,99,93,102,199,234,96,1226,	0,4063,6948,9298,11679,14416,16061,17125,25953,
#Partially deleted in new
chr11	120111297	120123271	chr11:120111297-120123271	0	-	120111297	120111297	8553170	6	1179,77,99,93,102,82,	0,4040,6925,9275,11656,11892,
#Partially deleted in new
chr11	120112409	120138114	chr11:120112409-120138114	0	-	120137369	120138031	789624	10	67,77,99,93,102,199,234,96,459,276,	0,2928,5813,8163,10544,13281,14926,15990,24818,25429,
#Partially deleted in new
chr11	120112409	120118867	chr11:120112409-120118867	0	-	120112409	120112409	8553170	4	67,77,99,42,	0,2928,5813,6416,
#Partially deleted in new
chr11	120112409	120123442	chr11:120112409-120123442	0	-	120112409	120112409	8553170	6	67,77,99,93,102,110,	0,2928,5813,8163,10544,10923,
#Partially deleted in new
chr11	120112409	120121993	chr11:120112409-120121993	0	-	120112409	120112409	8553170	5	67,77,99,93,629,	0,2928,5813,8163,8955,
#Partially deleted in new
chr11	120112409	120117106	chr11:120112409-120117106	0	-	120112409	120112409	8553170	2	67,1769,	0,2928,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	120112409	120125578	chr11:120112409-120125578	1	-	120112413	120122987	789624	6	67,77,99,93,102,1779,	0,2928,5813,8163,10544,11390,
#Partially deleted in new
chr11	120112409	120128913	chr11:120112409-120128913	1	-	120112413	120128668	789624	9	67,77,99,93,102,199,234,96,266,	0,2928,5813,8163,10544,13281,14926,15990,16238,
#Partially deleted in new
chr11	120112409	120118041	chr11:120112409-120118041	0	-	120112409	120112409	8553170	3	67,77,1083,	0,2928,4549,
#Partially deleted in new
chr11	120112409	120123033	chr11:120112409-120123033	0	-	120113646	120123033	789624	6	67,119,77,99,93,80,	0,1127,2928,5813,8163,10544,
#Partially deleted in new
chr11	120112409	120123032	chr11:120112409-120123032	0	-	120112413	120123032	789624	6	67,77,99,99,93,79,	0,2928,4549,5813,8163,10544,
#Deleted in new
chr11	120115339	120121980	chr11:120115339-120121980	0	-	120115339	120115339	8553170	4	75,99,93,47,	0,2883,5233,6594,
#Deleted in new
chr11	120115363	120120900	chr11:120115363-120120900	0	-	120115363	120120798	789624	4	51,99,93,142,	0,2859,5209,5395,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	120122951	120126357	chr11:120122951-120126357	0	-	120122951	120122951	8553170	2	104,667,	0,2739,
#Deleted in new
chr11	120127407	120128910	chr11:120127407-120128910	0	-	120127407	120127407	8553170	2	162,511,	0,992,
#Deleted in new
chr11	120137369	120138031	chr11:120137369-120138031	1	-	120137369	120138031	789624	2	317,193,	0,469,
#Deleted in new
chr11	120137739	120138453	chr11:120137739-120138453	0	-	120137739	120138031	789624	2	406,141,	0,573,
#Deleted in new
chr11	120137746	120139822	chr11:120137746-120139822	0	-	120137746	120138031	789624	3	399,128,24,	0,1323,2052,
#Partially deleted in new
chr11	120137764	120185423	chr11:120137764-120185423	0	-	120137764	120138031	789624	2	381,174,	0,47485,
#Partially deleted in new
chr11	120137916	120185529	chr11:120137916-120185529	0	-	120137916	120138031	789624	2	229,320,	0,47293,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	120168976	120171679	chr11:120168976-120171679	3	+	120168976	120168976	8553170	2	172,1909,	0,794,
#Deleted in new
chr11	120168976	120170153	chr11:120168976-120170153	0	+	120168976	120168976	8553170	2	172,383,	0,794,
#Partially deleted in new
chr11	120210766	120230332	chr11:120210766-120230332	3	+	120211279	120229142	789624	4	744,135,181,1465,	0,14894,16049,18101,
#Partially deleted in new
chr11	120211300	120229240	chr11:120211300-120229240	1	+	120225777	120229142	789624	4	210,51,181,373,	0,14444,15515,17567,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	120213735	120217513	chr11:120213735-120217513	0	+	120213735	120213735	8553170	2	234,417,	0,3361,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	120236639	120319944	chr11:120236639-120319944	1	+	120236673	120318392	789624	13	68,69,35,126,103,83,183,142,137,162,67,136,1592,	0,9809,32570,61625,62984,65646,68390,69004,70839,72785,78721,80589,81713,
#Partially deleted in new
chr11	120240193	120318884	chr11:120240193-120318884	3	+	120240343	120318392	789624	13	178,69,35,126,103,83,183,142,137,162,67,136,532,	0,6255,29016,58071,59430,62092,64836,65450,67285,69231,75167,77035,78159,
#Partially deleted in new
chr11	120240260	120318439	chr11:120240260-120318439	0	+	120240343	120301062	789624	14	111,69,35,126,103,47,83,183,142,137,162,67,136,87,	0,6188,28949,58004,59363,60782,62025,64769,65383,67218,69164,75100,76968,78092,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	120249758	120265932	chr11:120249758-120265932	3	-	120249758	120249758	789624	8	647,71,63,153,982,31,114,67,	0,3825,4353,5064,6253,11530,15568,16107,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	120258918	120265932	chr11:120258918-120265932	0	-	120258918	120258918	8553170	3	472,31,67,	0,2370,6947,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	120300902	120304330	chr11:120300902-120304330	0	+	120300902	120300902	8553170	1	3428,	0,
#Partially deleted in new
chr11	120305487	120319331	chr11:120305487-120319331	0	+	120305487	120305487	8553170	6	298,137,162,67,136,979,	0,1991,3937,9873,11741,12865,
#Partially deleted in new
chr11	120305643	120317364	chr11:120305643-120317364	0	+	120305643	120317364	789624	4	142,137,67,136,	0,1835,9717,11585,
#Deleted in new
chr11	120317165	120319187	chr11:120317165-120319187	0	+	120317165	120317165	8553170	2	199,835,	0,1187,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	120325128	120333679	chr11:120325128-120333679	3	+	120327441	120330515	789624	3	240,200,3703,	0,2312,4848,
#Partially deleted in new
chr11	120325295	120330818	chr11:120325295-120330818	1	+	120327375	120330515	789624	3	73,519,842,	0,1826,4681,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	120325295	120333679	chr11:120325295-120333679	0	+	120325295	120325295	8553170	2	73,3703,	0,4681,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	120325306	120333682	chr11:120325306-120333682	1	+	120327375	120330515	789624	4	62,519,73,3276,	0,1815,4670,5100,
#Deleted in new
chr11	120327119	120327641	chr11:120327119-120327641	0	+	120327119	120327119	8553170	2	207,201,	0,321,
#Partially deleted in new
chr11	120336913	120487060	chr11:120336913-120487060	1	+	120337243	120485077	0	40	362,24,86,99,50,58,179,78,120,141,75,93,111,99,43,106,138,33,115,106,213,133,36,155,147,86,126,115,101,78,76,168,88,87,80,234,471,317,70,1994,	0,69204,70824,83839,84889,87444,91155,92526,92798,94857,100394,103215,104793,105190,108508,109489,110034,110960,111320,112195,114598,120204,120807,121166,122260,123758,128323,130280,132374,136136,137646,138426,139747,140305,140533,141242,143046,144346,147524,148153,
#Partially deleted in new
chr11	120337077	120489936	chr11:120337077-120489936	3	+	120337243	120485077	0	41	198,24,86,57,99,50,58,179,78,120,141,75,93,111,99,43,106,138,33,115,106,213,133,36,155,147,86,126,115,101,78,76,168,88,87,80,234,471,317,70,4870,	0,69040,70660,72316,83675,84725,87280,90991,92362,92634,94693,100230,103051,104629,105026,108344,109325,109870,110796,111156,112031,114434,120040,120643,121002,122096,123594,128159,130116,132210,135972,137482,138262,139583,140141,140369,141078,142882,144182,147360,147989,
#Partially deleted in new
chr11	120365665	120365963	chr11:120365665-120365963	3	+	120365665	120365665	8553170	1	298,	0,
#Partially deleted in new
chr11	120385293	120489034	chr11:120385293-120489034	1	+	120421813	120485077	789624	41	193,24,86,57,99,50,58,179,78,120,141,75,93,111,99,43,106,138,33,115,106,213,133,36,155,147,86,126,115,101,78,76,168,88,87,80,234,471,317,70,3968,	0,20824,22444,24100,35459,36509,39064,42775,44146,44418,46477,52014,54835,56413,56810,60128,61109,61654,62580,62940,63815,66218,71824,72427,72786,73880,75378,79943,81900,83994,87756,89266,90046,91367,91925,92153,92862,94666,95966,99144,99773,
#Boundary problem: need 36, got 0, diff 36, mapped 0.0
chr11	120385320	120477646	chr11:120385320-120477646	0	+	120385320	120385320	8553170	36	166,24,86,57,99,50,58,179,78,120,141,75,93,111,99,43,106,138,33,115,106,213,133,36,155,147,86,126,115,101,78,76,168,88,87,200,	0,20797,22417,24073,35432,36482,39037,42748,44119,44391,46450,51987,54808,56386,56783,60101,61082,61627,62553,62913,63788,66191,71797,72400,72759,73853,75351,79916,81873,83967,87729,89239,90019,91340,91898,92126,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	120405932	120411837	chr11:120405932-120411837	0	+	120405932	120405932	8553170	2	209,4100,	0,1805,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	120438447	120451633	chr11:120438447-120451633	0	+	120438447	120438447	8553170	10	1774,111,99,43,106,138,33,115,106,122,	0,3259,3656,6974,7955,8500,9426,9786,10661,13064,
#Partially deleted in new
chr11	120445421	120447266	chr11:120445421-120447266	0	+	120445421	120445421	8553170	3	43,106,319,	0,981,1526,
#Partially deleted in new
chr11	120448493	120457752	chr11:120448493-120457752	0	+	120448493	120448493	8553170	4	721,213,133,32,	0,3018,8624,9227,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	120449274	120459194	chr11:120449274-120459194	0	+	120449274	120449274	8553170	5	2450,133,36,155,21,	0,7843,8446,8805,9899,
#Deleted in new
chr11	120457050	120459339	chr11:120457050-120459339	0	+	120457050	120457050	8553170	2	1184,166,	0,2123,
#Partially deleted in new
chr11	120457717	120467308	chr11:120457717-120467308	0	+	120457717	120457717	8553170	4	1603,86,126,115,	0,2954,7519,9476,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	120462548	120473127	chr11:120462548-120473127	0	+	120462548	120462548	8553170	4	2814,115,101,78,	0,4645,6739,10501,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	120475974	120480107	chr11:120475974-120480107	0	+	120475974	120475974	8553170	5	774,87,80,234,148,	0,1244,1472,2181,3985,
#Deleted in new
chr11	120476999	120477573	chr11:120476999-120477573	0	+	120476999	120476999	8553170	2	306,127,	0,447,
#Partially deleted in new
chr11	120511699	120988904	chr11:120511699-120988904	3	+	120660318	120986260	789624	21	188,108,132,165,98,166,179,54,162,153,105,108,204,114,110,174,166,226,129,119,3001,	0,141985,148569,290993,303678,308055,320152,325091,350259,362366,363439,386832,393590,428647,441155,445080,449209,450756,455495,470406,474204,
#Partially deleted in new
chr11	120511745	120986685	chr11:120511745-120986685	1	+	120660318	120986260	789624	21	142,105,132,165,98,166,179,54,162,153,105,108,204,114,110,174,166,226,129,119,782,	0,141942,148523,290947,303632,308009,320106,325045,350213,362320,363393,386786,393544,428601,441109,445034,449163,450710,455449,470360,474158,
#Partially deleted in new
chr11	120511801	120515022	chr11:120511801-120515022	0	+	120511801	120511801	8553170	2	86,38,	0,3183,
#Partially deleted in new
chr11	120564433	120987261	chr11:120564433-120987261	1	+	120660318	120986260	789624	20	292,132,165,98,166,179,54,162,153,105,108,204,114,110,174,166,226,129,119,1358,	0,95835,238259,250944,255321,267418,272357,297525,309632,310705,334098,340856,375913,388421,392346,396475,398022,402761,417672,421470,
#Partially deleted in new
chr11	120564485	120962978	chr11:120564485-120962978	0	+	120564485	120564485	8553170	18	240,108,132,165,98,166,179,54,162,153,105,108,204,114,110,174,166,523,	0,89199,95783,238207,250892,255269,267366,272305,297473,309580,310653,334046,340804,375861,388369,392294,396423,397970,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	120575798	120815438	chr11:120575798-120815438	0	+	120575798	120575798	8553170	4	106,176,165,61,	0,589,226894,239579,
#Partially deleted in new
chr11	120619933	120620267	chr11:120619933-120620267	7	-	120619933	120619933	16724991	1	334,	0,
#Partially deleted in new
chr11	120858239	120862034	chr11:120858239-120862034	0	+	120858239	120858239	8553170	5	255,106,79,53,76,	0,697,898,1094,3719,
#Partially deleted in new
chr11	120859047	120862285	chr11:120859047-120862285	0	+	120859047	120859047	8553170	3	169,53,327,	0,286,2911,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	120867932	120894797	chr11:120867932-120894797	3	-	120867932	120867932	789624	2	5833,481,	0,26384,
#Deleted in new
chr11	120936101	120936654	chr11:120936101-120936654	7	-	120936101	120936101	16724991	1	553,	0,
#Partially deleted in new
chr11	121024071	121087096	chr11:121024071-121087096	1	+	121045690	121087096	789624	8	83,150,140,182,257,127,117,319,	0,21602,23456,29479,30980,34273,35897,62706,
#Partially deleted in new
chr11	121024092	121089607	chr11:121024092-121089607	0	+	121045690	121053713	789624	8	199,150,140,103,257,127,117,2830,	0,21581,23435,29537,30959,34252,35876,62685,
#Partially deleted in new
chr11	121024112	121047643	chr11:121024112-121047643	0	+	121045690	121047643	789624	4	179,108,150,116,	0,12392,21561,23415,
#Partially deleted in new
chr11	121024120	121090775	chr11:121024120-121090775	3	+	121045690	121087096	789624	8	171,150,140,182,257,127,117,3998,	0,21553,23407,29430,30931,34224,35848,62657,
#Partially deleted in new
chr11	121024120	121088345	chr11:121024120-121088345	0	+	121045690	121058377	789624	8	171,212,108,150,140,127,117,1568,	0,11612,12384,21553,23407,34224,35848,62657,
#Partially deleted in new
chr11	121024124	121110722	chr11:121024124-121110722	0	+	121024124	121024124	8553170	10	167,150,140,182,257,127,117,65,134,1512,	0,21549,23403,29426,30927,34220,35844,78540,81706,85086,
#Partially deleted in new
chr11	121024143	121086939	chr11:121024143-121086939	0	+	121045690	121053713	789624	7	148,150,140,103,127,117,162,	0,21530,23384,29486,34201,35825,62634,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	121035240	121055310	chr11:121035240-121055310	0	+	121045690	121055310	789624	6	1074,108,150,140,182,259,	0,1264,10433,12287,18310,19811,
#Partially deleted in new
chr11	121045738	121113108	chr11:121045738-121113108	3	+	121045738	121113108	789624	10	85,140,182,257,127,117,65,134,288,37,	0,1789,7812,9313,12606,14230,56926,60092,63472,67333,
#Deleted in new
chr11	121045760	121047901	chr11:121045760-121047901	0	+	121045760	121045760	8553170	2	63,374,	0,1767,
#Partially deleted in new
chr11	121045780	121086849	chr11:121045780-121086849	0	+	121057601	121086849	789624	8	43,140,103,257,107,127,117,72,	0,1747,7849,9271,11727,12564,14188,40997,
#Partially deleted in new
chr11	121054747	121087182	chr11:121054747-121087182	0	+	121054747	121054747	8553170	4	561,127,117,405,	0,3597,5221,32030,
#Partially deleted in new
chr11	121101172	121191493	chr11:121101172-121191493	3	+	121102665	121190806	789624	24	270,65,134,288,138,166,413,571,593,574,602,562,200,384,287,296,111,203,164,249,163,88,117,788,	0,1492,4658,8038,11899,12380,17133,24129,26579,28465,36248,44382,51708,56668,58962,60902,64100,65405,66881,67504,86659,87907,88591,89533,
#Partially deleted in new
chr11	121101378	121191450	chr11:121101378-121191450	1	+	121102665	121190806	789624	24	64,65,134,288,138,166,413,571,593,574,602,562,200,384,287,281,111,203,164,249,163,88,117,745,	0,1286,4452,7832,11693,12174,16927,23923,26373,28259,36042,44176,51502,56462,58756,60711,63894,65199,66675,67298,86453,87701,88385,89327,
#Partially deleted in new
chr11	121102665	121190806	chr11:121102665-121190806	1	+	121102665	121190806	789624	23	64,134,288,138,166,413,571,593,574,602,562,200,384,287,296,111,203,164,249,163,88,117,101,	0,3165,6545,10406,10887,15640,22636,25086,26972,34755,42889,50215,55175,57469,59409,62607,63912,65388,66011,85166,86414,87098,88040,
#Partially deleted in new
chr11	121129963	121191462	chr11:121129963-121191462	0	+	121129963	121190806	789624	15	248,602,562,200,384,287,281,111,203,164,249,163,88,345,757,	0,7457,15591,22917,27877,30171,32126,35309,36614,38090,38713,57868,59116,59800,60742,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	121140911	121146278	chr11:121140911-121146278	0	+	121140911	121140911	8553170	2	108,724,	0,4643,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	121146075	121191339	chr11:121146075-121191339	0	+	121146075	121146075	8553170	12	41,200,384,287,281,111,203,872,163,88,117,634,	0,6805,11765,14059,16014,19197,20502,21978,41756,43004,43688,44630,
#Partially deleted in new
chr11	121238303	121238688	chr11:121238303-121238688	7	+	121238303	121238303	16724991	1	385,	0,
#Deleted in new
chr11	121250269	121250978	chr11:121250269-121250978	7	-	121250269	121250269	16724991	1	709,	0,
#Partially deleted in new
chr11	121292452	121308694	chr11:121292452-121308694	3	+	121303375	121307512	789624	5	364,220,133,101,1638,	0,10913,11908,13933,14604,
#Partially deleted in new
chr11	121292680	121304925	chr11:121292680-121304925	0	+	121292680	121292680	8553170	3	136,220,565,	0,10685,11680,
#Partially deleted in new
chr11	121292758	121306741	chr11:121292758-121306741	0	+	121292758	121292758	8553170	4	58,220,133,356,	0,10607,11602,13627,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	121292770	121305710	chr11:121292770-121305710	0	+	121292770	121292770	8553170	2	46,2345,	0,10595,
#Partially deleted in new
chr11	121292770	121307124	chr11:121292770-121307124	0	+	121303375	121307124	789624	5	46,220,154,101,68,	0,10595,11569,13615,14286,
#Partially deleted in new
chr11	121292770	121308630	chr11:121292770-121308630	1	+	121303375	121307512	789624	6	46,220,133,101,187,1174,	0,10595,11590,13615,14286,14686,
#Partially deleted in new
chr11	121292851	121308633	chr11:121292851-121308633	1	+	121303375	121307512	789624	5	227,220,133,101,1577,	0,10514,11509,13534,14205,
#Partially deleted in new
chr11	121304384	121307265	chr11:121304384-121307265	0	+	121304384	121304384	8553170	3	109,28,209,	0,2074,2672,
#Deleted in new
chr11	121305749	121307843	chr11:121305749-121307843	0	+	121305749	121305749	8553170	2	737,787,	0,1307,
#Deleted in new
chr11	121361853	121362865	chr11:121361853-121362865	7	-	121361853	121361853	16724991	1	1012,	0,
#Deleted in new
chr11	121426644	121427416	chr11:121426644-121427416	7	-	121426644	121426644	16724991	1	772,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	121447330	121453013	chr11:121447330-121453013	3	-	121447330	121447330	8553170	2	2569,339,	0,5344,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	121449695	121452919	chr11:121449695-121452919	0	-	121449695	121449695	8553170	2	204,245,	0,2979,
#Partially deleted in new
chr11	121452202	121633693	chr11:121452202-121633693	3	+	121452331	121629563	0	48	414,117,126,162,68,181,102,170,193,118,74,89,179,187,129,86,173,132,92,247,139,174,114,123,120,126,108,132,132,135,156,150,132,127,170,113,105,73,83,97,185,120,165,175,107,193,213,4198,	0,17804,25915,35829,37840,44666,60800,61949,68454,70383,70713,80261,91345,93040,97757,98382,101734,102984,105111,106388,107316,114737,117954,122038,125078,131255,134019,135817,137056,137837,138798,143420,151990,152910,153199,154642,154983,155901,158873,160533,162668,166571,167550,168861,169959,172882,175352,177293,
#Partially deleted in new
chr11	121452379	121547024	chr11:121452379-121547024	0	+	121452379	121452379	8553170	15	237,117,126,162,68,181,102,170,193,118,74,89,179,187,162,	0,17627,25738,35652,37663,44489,60623,61772,68277,70206,70536,80084,91168,92863,94483,
#Deleted in new
chr11	121555041	121558837	chr11:121555041-121558837	0	+	121555041	121555041	8553170	3	277,92,247,	0,2272,3549,
#Deleted in new
chr11	121557014	121558773	chr11:121557014-121558773	0	+	121557014	121557014	8553170	2	391,183,	0,1576,
#Partially deleted in new
chr11	121566724	121629684	chr11:121566724-121629684	1	+	121567058	121629563	789624	28	119,174,114,123,120,126,108,132,132,135,156,150,132,127,170,113,105,73,83,97,185,120,165,175,107,193,213,189,	0,215,3432,7516,10556,16733,19497,21295,22534,23315,24276,28898,37468,38388,38677,40120,40461,41379,44351,46011,48146,52049,53028,54339,55437,58360,60830,62771,
#Partially deleted in new
chr11	121576759	121629691	chr11:121576759-121629691	1	+	121577282	121629563	789624	25	379,120,126,108,132,132,135,156,150,132,127,170,113,105,73,83,97,185,120,165,175,107,193,213,196,	0,521,6698,9462,11260,12499,13280,14241,18863,27433,28353,28642,30085,30426,31344,34316,35976,38111,42014,42993,44304,45402,48325,50795,52736,
#Partially deleted in new
chr11	121576837	121629678	chr11:121576837-121629678	1	+	121576848	121629563	789624	25	201,120,126,108,132,132,135,156,150,132,127,170,113,105,73,83,97,185,120,165,175,107,193,213,183,	0,443,6620,9384,11182,12421,13202,14163,18785,27355,28275,28564,30007,30348,31266,34238,35898,38033,41936,42915,44226,45324,48247,50717,52658,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr11	121590418	121629684	chr11:121590418-121629684	1	+	121590839	121629563	789624	19	479,156,150,132,127,170,113,105,73,83,97,185,120,165,175,107,193,213,189,	0,582,5204,13774,14694,14983,16426,16767,17685,20657,22317,24452,28355,29334,30645,31743,34666,37136,39077,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	121608199	121621240	chr11:121608199-121621240	0	+	121608199	121608199	8553170	6	2959,97,185,120,165,177,	0,4536,6671,10574,11553,12864,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	121611251	121621234	chr11:121611251-121621234	0	+	121611251	121611251	8553170	5	1581,185,120,165,171,	0,3619,7522,8501,9812,
#Partially deleted in new
chr11	121614285	121622269	chr11:121614285-121622269	0	+	121614285	121614285	8553170	5	770,120,165,175,108,	0,4488,5467,6778,7876,
#Partially deleted in new
chr11	121626200	121629693	chr11:121626200-121629693	0	+	121626200	121626200	8553170	2	1567,198,	0,3295,
#Deleted in new
chr11	121628835	121632240	chr11:121628835-121632240	0	+	121628835	121628835	8553170	2	758,225,	0,3180,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	122004354	122004451	chr11:122004354-122004451	3	+	122004354	122004354	8553170	1	97,	0,
#Partially deleted in new
chr11	122028326	122101702	chr11:122028326-122101702	0	-	122028326	122028326	8553170	2	519,256,	0,73120,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	122028329	122100448	chr11:122028329-122100448	1	-	122028329	122028329	8553170	8	516,53,149,217,33,92,299,75,	0,3928,4984,9697,11887,35850,37806,72044,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	122028332	122039534	chr11:122028332-122039534	0	-	122028332	122028332	8553170	2	513,1508,	0,9694,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	122028350	122100475	chr11:122028350-122100475	1	-	122028350	122028350	8553170	5	495,149,217,2255,102,	0,4963,9676,35829,72023,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	122028360	122069648	chr11:122028360-122069648	1	-	122028360	122028360	8553170	8	485,149,217,92,299,129,237,126,	0,4953,9666,35819,37775,39022,40584,41162,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	122028363	122101697	chr11:122028363-122101697	1	-	122028363	122028363	8553170	5	482,33,92,1480,251,	0,11853,35816,36591,73083,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	122028365	122100492	chr11:122028365-122100492	0	-	122028365	122028365	8553170	4	480,149,2255,119,	0,4948,35814,72008,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	122028370	122100539	chr11:122028370-122100539	1	-	122028370	122028370	8553170	10	475,149,217,92,129,237,145,68,54,166,	0,4943,9656,35809,39012,40574,41152,53366,54326,72003,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	122066335	122070156	chr11:122066335-122070156	0	-	122066335	122066335	8553170	4	99,237,145,79,	0,2609,3187,3742,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	122089102	122102178	chr11:122089102-122102178	1	-	122089102	122089102	789624	2	2638,732,	0,12344,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	122089105	122102166	chr11:122089105-122102166	0	-	122089105	122089105	789624	2	2614,720,	0,12341,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	122089109	122100447	chr11:122089109-122100447	0	-	122089109	122089109	8553170	2	2610,74,	0,11264,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	122089109	122101029	chr11:122089109-122101029	0	-	122089109	122089109	789624	2	2631,656,	0,11264,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	122089120	122367977	chr11:122089120-122367977	0	-	122089120	122089120	8553170	4	2599,82,63,482,	0,66430,91215,278375,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	122089143	122156371	chr11:122089143-122156371	0	-	122089143	122089143	789624	3	2576,82,275,	0,66407,66953,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	122089185	122157113	chr11:122089185-122157113	0	-	122089185	122089185	789624	3	2534,82,185,	0,66365,67743,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	122089195	122309451	chr11:122089195-122309451	1	-	122089195	122089195	8553170	6	2524,82,63,146,120,202,	0,66355,91140,113568,203088,220054,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	122089195	122367605	chr11:122089195-122367605	0	-	122089195	122089195	8553170	6	2524,82,63,72,120,110,	0,66355,91140,100258,203088,278300,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	122090138	122453731	chr11:122090138-122453731	0	-	122090138	122090138	8553170	6	1581,82,63,120,300,116,	0,65412,90197,202145,203168,363477,
#Partially deleted in new
chr11	122091054	122101697	chr11:122091054-122101697	0	-	122091054	122091054	8553170	3	686,33,251,	0,9319,10392,
#Partially deleted in new
chr11	122091253	122105169	chr11:122091253-122105169	0	-	122091253	122091253	8553170	2	487,99,	0,13817,
#Partially deleted in new
chr11	122091284	122101686	chr11:122091284-122101686	1	-	122091284	122091284	8553170	3	435,33,240,	0,9089,10162,
#Partially deleted in new
chr11	122091416	122105942	chr11:122091416-122105942	0	-	122091416	122091416	8553170	2	303,872,	0,13654,
#Partially deleted in new
chr11	122091544	122180438	chr11:122091544-122180438	1	-	122091544	122091544	8553170	4	196,191,82,103,	0,24588,64006,88791,
#Partially deleted in new
chr11	122091628	122203062	chr11:122091628-122203062	0	-	122091628	122091628	789624	4	112,82,63,299,	0,63922,88707,111135,
#Partially deleted in new
chr11	122099756	122099844	chr11:122099756-122099844	3	-	122099756	122099756	5263520	1	88,	0,
#Partially deleted in new
chr11	122100677	122101686	chr11:122100677-122101686	0	-	122100677	122100677	8553170	2	352,240,	0,769,
#Partially deleted in new
chr11	122100908	122101686	chr11:122100908-122101686	0	-	122100908	122100908	8553170	2	322,240,	0,538,
#Partially deleted in new
chr11	122115353	122116215	chr11:122115353-122116215	3	-	122115595	122115922	789624	1	862,	0,
#Partially deleted in new
chr11	122146521	122146593	chr11:122146521-122146593	3	-	122146521	122146521	5263520	1	72,	0,
#Partially deleted in new
chr11	122152228	122152308	chr11:122152228-122152308	3	-	122152228	122152228	5263520	1	80,	0,
#Duplicated in new
chr11	122154754	122556721	chr11:122154754-122556721	3	-	122154754	122154754	8553170	7	878,63,120,300,28,87,318,	0,25581,137529,138552,384724,399184,401649,
#Partially deleted in new
chr11	122155421	122203062	chr11:122155421-122203062	0	-	122155421	122155421	8553170	3	211,63,299,	0,24914,47342,
#Partially deleted in new
chr11	122180337	122367973	chr11:122180337-122367973	0	-	122180337	122180337	8553170	4	61,120,300,478,	0,111946,112969,187158,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	122199118	122203003	chr11:122199118-122203003	0	-	122199118	122199118	8553170	2	2309,240,	0,3645,
#Partially deleted in new
chr11	122203508	122367872	chr11:122203508-122367872	0	-	122203508	122203508	8553170	3	87,120,377,	0,88775,163987,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	122232853	122422756	chr11:122232853-122422756	1	-	122232853	122232853	8553170	5	563,95,120,256,65,	0,1427,59430,151512,189838,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	122232857	122309487	chr11:122232857-122309487	0	-	122232857	122232857	8553170	4	559,120,300,238,	0,59426,60449,76392,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	122233243	122367658	chr11:122233243-122367658	1	-	122233243	122233243	8553170	6	173,120,300,164,75,163,	0,59040,60063,61598,68081,134252,
#Partially deleted in new
chr11	122234261	122367815	chr11:122234261-122367815	0	-	122234261	122234261	8553170	3	114,120,320,	0,58022,133234,
#Partially deleted in new
chr11	122292273	122422871	chr11:122292273-122422871	0	-	122292273	122292273	8553170	2	130,180,	0,130418,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	122294937	122301763	chr11:122294937-122301763	3	-	122294937	122294937	8553170	2	68,439,	0,6387,
#Partially deleted in new
chr11	122295189	122308019	chr11:122295189-122308019	3	+	122295189	122295189	8553170	3	132,89,350,	0,464,12480,
#Partially deleted in new
chr11	122449209	122449331	chr11:122449209-122449331	3	+	122449209	122449209	8553170	1	122,	0,
#Partially deleted in new
chr11	122451473	122451599	chr11:122451473-122451599	3	+	122451473	122451473	8553170	1	126,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	122579204	122579307	chr11:122579204-122579307	3	-	122579204	122579204	8553170	1	103,	0,
#Deleted in new
chr11	122613443	122614486	chr11:122613443-122614486	7	-	122613443	122613443	16724991	1	1043,	0,
#Deleted in new
chr11	122618850	122619274	chr11:122618850-122619274	7	+	122618850	122618850	16724991	1	424,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr11	122655674	122814473	chr11:122655674-122814473	3	+	122656049	122809886	0	14	536,54,187,199,170,209,133,121,123,93,145,107,110,4725,	0,120544,121349,123822,127378,133425,139027,140481,141236,143267,145513,150735,152392,154074,
#Partially deleted in new
chr11	122655724	122727599	chr11:122655724-122727599	0	+	122655724	122655724	8553170	2	486,86,	0,71789,
#Partially deleted in new
chr11	122709261	122779595	chr11:122709261-122779595	0	+	122709261	122709261	8553170	4	213,54,187,99,	0,66957,67762,70235,
#Partially deleted in new
chr11	122774095	122789308	chr11:122774095-122789308	0	+	122774095	122774095	8553170	6	168,54,187,199,170,209,	0,2123,2928,5401,8957,15004,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	122775633	122779702	chr11:122775633-122779702	0	+	122775633	122775633	8553170	3	639,187,206,	0,1390,3863,
#Partially deleted in new
chr11	122779376	122789308	chr11:122779376-122789308	0	+	122779376	122779376	8553170	3	319,170,209,	0,3676,9723,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	122782363	122794796	chr11:122782363-122794796	0	+	122782363	122782363	8553170	3	859,209,95,	0,6736,12338,
#Deleted in new
chr11	122794777	122797264	chr11:122794777-122797264	0	+	122794777	122794777	8553170	3	57,121,354,	0,1378,2133,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	122838499	122872639	chr11:122838499-122872639	3	+	122838546	122871399	0	10	93,147,153,144,162,81,84,147,87,1371,	0,11568,13193,15443,17195,23964,26136,28909,29513,32769,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	122862302	122872637	chr11:122862302-122872637	1	+	122862408	122871399	0	5	242,84,147,87,1369,	0,2333,5106,5710,8966,
#Partially deleted in new
chr11	122864590	122871497	chr11:122864590-122871497	0	+	122864590	122864590	8553170	4	129,147,87,229,	0,2818,3422,6678,
#Partially deleted in new
chr11	122882527	122959721	chr11:122882527-122959721	3	+	122885849	122959445	789624	9	445,433,520,114,656,295,81,129,474,	0,3233,21397,42369,51892,63970,73968,74835,76720,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	122882682	122905892	chr11:122882682-122905892	1	+	122885849	122905231	789624	4	290,433,520,721,	0,3078,21242,22489,
#Partially deleted in new
chr11	122885757	122959798	chr11:122885757-122959798	1	+	122885849	122959445	789624	8	436,520,114,656,295,81,129,551,	0,18167,39139,48662,60740,70738,71605,73490,
#Partially deleted in new
chr11	122935039	122947524	chr11:122935039-122947524	0	+	122935039	122935039	8553170	2	36,1027,	0,11458,
#Deleted in new
chr11	122960326	122961086	chr11:122960326-122961086	7	+	122960326	122960326	16724991	1	760,	0,
#Partially deleted in new
chr11	122977569	122981720	chr11:122977569-122981720	3	-	122977648	122981671	789624	3	322,197,311,	0,1691,3840,
#Deleted in new
chr11	123017637	123018661	chr11:123017637-123018661	7	+	123017637	123017637	16724991	1	1024,	0,
#Partially deleted in new
chr11	123035866	123036224	chr11:123035866-123036224	7	+	123035866	123035866	16724991	1	358,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	123049786	123050353	chr11:123049786-123050353	7	-	123049786	123049786	16724991	2	192,107,	0,460,
#Partially deleted in new
chr11	123051160	123051401	chr11:123051160-123051401	7	+	123051160	123051160	16724991	1	241,	0,
#Partially deleted in new
chr11	123057488	123062335	chr11:123057488-123062335	1	-	123057733	123061324	0	8	340,64,203,556,153,206,210,272,	0,1278,1570,1984,2627,3104,3631,4575,
#Partially deleted in new
chr11	123057488	123061789	chr11:123057488-123061789	1	-	123057733	123061324	0	9	431,233,199,203,556,153,206,210,115,	0,763,1143,1570,1984,2627,3104,3631,4186,
#Partially deleted in new
chr11	123057488	123062136	chr11:123057488-123062136	1	-	123057733	123061324	789624	8	431,233,199,203,376,101,210,73,	0,763,1143,1570,1984,3209,3631,4575,
#Partially deleted in new
chr11	123057488	123062335	chr11:123057488-123062335	3	-	123057733	123061324	0	9	431,233,199,203,556,153,206,210,272,	0,763,1143,1570,1984,2627,3104,3631,4575,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	123057495	123060426	chr11:123057495-123060426	0	-	123057495	123057495	8553170	4	424,1010,556,311,	0,756,1977,2620,
#Partially deleted in new
chr11	123057496	123061332	chr11:123057496-123061332	1	-	123057733	123061324	0	8	423,233,199,203,556,153,206,213,	0,755,1135,1562,1976,2619,3096,3623,
#Partially deleted in new
chr11	123057497	123060386	chr11:123057497-123060386	1	-	123057733	123059884	789624	6	422,233,199,203,556,271,	0,754,1134,1561,1975,2618,
#Partially deleted in new
chr11	123057700	123061331	chr11:123057700-123061331	1	-	123057733	123061324	789624	8	219,233,199,203,556,96,206,212,	0,551,931,1358,1772,2415,2892,3419,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	123057778	123059448	chr11:123057778-123059448	0	-	123057778	123059154	789624	4	141,233,199,390,	0,473,853,1280,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	123057878	123059097	chr11:123057878-123059097	0	-	123057878	123058809	789624	3	41,233,466,	0,373,753,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	123058076	123058161	chr11:123058076-123058161	3	-	123058076	123058076	789624	1	85,	0,
#Partially deleted in new
chr11	123058790	123062139	chr11:123058790-123062139	0	-	123058790	123058790	8553170	5	40,45,94,210,76,	0,268,1914,2329,3273,
#Partially deleted in new
chr11	123059155	123060223	chr11:123059155-123060223	0	-	123059155	123059155	8553170	3	106,290,108,	0,317,960,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	123059232	123062207	chr11:123059232-123062207	0	-	123059232	123059232	8553170	5	796,153,206,210,144,	0,883,1360,1887,2831,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	123059334	123059422	chr11:123059334-123059422	3	-	123059334	123059334	789624	1	88,	0,
#Deleted in new
chr11	123059475	123062124	chr11:123059475-123062124	0	-	123059475	123061144	789624	5	553,153,206,139,61,	0,640,1117,1644,2588,
#Deleted in new
chr11	123059813	123062669	chr11:123059813-123062669	0	-	123059813	123059813	8553170	4	455,206,210,323,	0,779,1306,2533,
#Deleted in new
chr11	123059964	123062136	chr11:123059964-123062136	0	-	123059964	123061324	789624	5	64,153,83,210,73,	0,151,628,1155,2099,
#Deleted in new
chr11	123059981	123062136	chr11:123059981-123062136	0	-	123059981	123059981	8553170	3	287,210,73,	0,1138,2082,
#Deleted in new
chr11	123060117	123063230	chr11:123060117-123063230	0	-	123060117	123061324	789624	4	151,206,210,481,	0,475,1002,2632,
#Deleted in new
chr11	123060128	123061483	chr11:123060128-123061483	0	-	123060128	123061324	789624	4	140,206,210,32,	0,464,991,1323,
#Deleted in new
chr11	123060145	123062352	chr11:123060145-123062352	0	-	123060145	123061324	789624	4	123,206,210,40,	0,447,974,2167,
#Deleted in new
chr11	123060164	123062022	chr11:123060164-123062022	0	-	123060164	123061324	789624	4	104,206,210,154,	0,428,955,1704,
#Deleted in new
chr11	123060592	123062032	chr11:123060592-123062032	0	-	123060592	123061324	789624	3	206,210,120,	0,527,1320,
#Deleted in new
chr11	123060606	123061833	chr11:123060606-123061833	0	-	123060606	123061324	789624	3	192,210,246,	0,513,981,
#Deleted in new
chr11	123060824	123062136	chr11:123060824-123062136	0	-	123060824	123060824	8553170	2	505,73,	0,1239,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	123069864	123195281	chr11:123069864-123195281	3	-	123073473	123194940	789624	7	3910,142,123,168,202,158,369,	0,4837,13220,13815,14647,27930,125048,
#Partially deleted in new
chr11	123073484	123083736	chr11:123073484-123083736	0	-	123073484	123073484	8553170	4	290,115,123,57,	0,1217,9600,10195,
#Partially deleted in new
chr11	123073705	123084714	chr11:123073705-123084714	0	-	123073705	123073705	8553170	5	69,149,123,168,203,	0,996,9379,9974,10806,
#Partially deleted in new
chr11	123083081	123097966	chr11:123083081-123097966	0	-	123083081	123083081	8553170	4	126,168,202,172,	0,598,1430,14713,
#Deleted in new
chr11	123135922	123136376	chr11:123135922-123136376	7	-	123135922	123135922	16724991	1	454,	0,
#Partially deleted in new
chr11	123188801	123228277	chr11:123188801-123228277	3	+	123188801	123188801	8553170	5	135,86,84,106,290,	0,2613,4207,23575,39186,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	123301389	123301523	chr11:123301389-123301523	3	+	123301389	123301389	8553170	1	134,	0,
#Partially deleted in new
chr11	123313673	123314770	chr11:123313673-123314770	0	-	123313673	123313673	8553170	2	120,268,	0,829,
#Deleted in new
chr11	123340173	123340714	chr11:123340173-123340714	7	-	123340173	123340173	16724991	1	541,	0,
#Partially deleted in new
chr11	123358427	123627767	chr11:123358427-123627767	1	+	123577463	123622595	789624	21	372,78,211,21,85,104,96,81,116,157,190,144,119,143,104,204,91,108,118,133,1174,	0,122388,218939,225884,235654,236307,237514,242040,244998,246894,248181,250231,251367,251768,254333,255027,256317,260265,260679,264078,268166,
#Deleted in new
chr11	123381439	123381512	chr11:123381439-123381512	3	-	123381439	123381439	5263520	1	73,	0,
#Partially deleted in new
chr11	123430349	123435719	chr11:123430349-123435719	1	+	123430792	123435475	789624	3	817,109,286,	0,1668,5084,
#Partially deleted in new
chr11	123430693	123622676	chr11:123430693-123622676	3	+	123430792	123622595	789624	20	473,78,211,21,85,104,96,81,116,157,190,144,119,143,104,204,91,108,118,171,	0,50122,146673,153618,163388,164041,165248,169774,172732,174628,175915,177965,179101,179502,182067,182761,184051,187999,188413,191812,
#Partially deleted in new
chr11	123430736	123435710	chr11:123430736-123435710	1	+	123430792	123435467	789624	2	430,277,	0,4697,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	123454397	123460410	chr11:123454397-123460410	0	+	123454397	123454397	8553170	2	432,2039,	0,3974,
#Partially deleted in new
chr11	123454657	123600547	chr11:123454657-123600547	0	+	123577463	123600547	789624	8	172,78,211,21,85,104,96,80,	0,26158,122709,129654,139424,140077,141284,145810,
#Partially deleted in new
chr11	123480737	123594838	chr11:123480737-123594838	0	+	123480801	123594838	789624	5	156,211,21,85,104,	0,96629,103574,113344,113997,
#Partially deleted in new
chr11	123491652	123622759	chr11:123491652-123622759	1	+	123491849	123622595	789624	20	307,211,21,85,104,96,81,116,157,190,144,119,143,104,204,91,12,108,118,254,	0,85714,92659,102429,103082,104289,108815,111773,113669,114956,117006,118142,118543,121108,121802,123092,126692,127040,127454,130853,
#Partially deleted in new
chr11	123509917	123594838	chr11:123509917-123594838	0	+	123577463	123594838	789624	5	120,211,21,85,104,	0,67449,74394,84164,84817,
#Partially deleted in new
chr11	123525635	123622649	chr11:123525635-123622649	1	+	123526148	123622595	789624	21	536,211,21,21,85,104,96,81,116,157,190,144,119,143,104,204,91,12,108,118,144,	0,51731,52774,58676,68446,69099,70306,74832,77790,79686,80973,83023,84159,84560,87125,87819,89109,92709,93057,93471,96870,
#Partially deleted in new
chr11	123525821	123622622	chr11:123525821-123622622	1	+	123526148	123622595	789624	20	350,211,21,85,104,96,81,116,157,190,144,119,143,104,204,92,9,110,118,117,	0,51545,58490,68260,68913,70120,74646,77604,79500,80787,82837,83973,84374,86939,87633,88923,92858,92869,93285,96684,
#Partially deleted in new
chr11	123525821	123627774	chr11:123525821-123627774	1	+	123526148	123622595	789624	20	350,211,21,85,104,96,81,116,157,190,144,119,143,104,204,91,12,108,118,5269,	0,51545,58490,68260,68913,70120,74646,77604,79500,80787,82837,83973,84374,86939,87633,88923,92523,92871,93285,96684,
#Partially deleted in new
chr11	123560261	123626401	chr11:123560261-123626401	1	+	123577463	123622595	789624	20	266,211,21,85,104,96,81,116,157,190,144,119,143,104,204,91,12,108,118,3896,	0,17105,24050,33820,34473,35680,40206,43164,45060,46347,48397,49533,49934,52499,53193,54483,58083,58431,58845,62244,
#Partially deleted in new
chr11	123560261	123619481	chr11:123560261-123619481	0	+	123560261	123560261	8553170	18	266,211,21,85,104,96,81,116,157,190,144,119,143,104,204,91,108,375,	0,17105,24050,33820,34473,35680,40206,43164,45060,46347,48397,49533,49934,52499,53193,54483,58431,58845,
#Partially deleted in new
chr11	123560276	123609902	chr11:123560276-123609902	0	+	123560641	123609902	789624	12	376,211,21,85,104,96,81,116,157,190,144,108,	0,17090,24035,33805,34458,35665,40191,43149,45045,46332,48382,49518,
#Partially deleted in new
chr11	123591086	123627774	chr11:123591086-123627774	1	+	123591394	123622595	789624	18	455,85,104,96,81,116,157,190,144,119,143,104,204,91,12,108,118,5269,	0,2995,3648,4855,9381,12339,14235,15522,17572,18708,19109,21674,22368,23658,27258,27606,28020,31419,
#Deleted in new
chr11	123597945	123599452	chr11:123597945-123599452	7	-	123597945	123597945	16724991	1	1507,	0,
#Partially deleted in new
chr11	123607808	123623055	chr11:123607808-123623055	1	+	123608501	123622595	789624	9	994,119,143,104,204,91,108,118,550,	0,1986,2387,4952,5646,6936,10884,11298,14697,
#Partially deleted in new
chr11	123613124	123622700	chr11:123613124-123622700	0	+	123613124	123613124	8553170	5	534,91,108,118,195,	0,1620,5568,5982,9381,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	123629186	123641124	chr11:123629186-123641124	0	-	123629186	123629186	8553170	3	264,86,2939,	0,4934,8999,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	123629188	123654607	chr11:123629188-123654607	3	-	123634142	123653801	0	7	4588,86,139,226,164,80,382,	0,4932,8997,13257,16398,24558,25037,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	123629188	123654604	chr11:123629188-123654604	1	-	123634142	123653801	0	6	4588,86,139,226,164,858,	0,4932,8997,13257,16398,24558,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	123631213	123654607	chr11:123631213-123654607	1	-	123634142	123653801	0	6	2993,139,226,164,80,382,	0,6972,11232,14373,22533,23012,
#Partially deleted in new
chr11	123642466	123655006	chr11:123642466-123655006	0	-	123642466	123653801	789624	4	205,164,80,117,	0,3120,11280,12423,
#Partially deleted in new
chr11	123642609	123655244	chr11:123642609-123655244	0	-	123642609	123653801	789624	4	62,164,80,137,	0,2977,11137,12498,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	123668498	123671637	chr11:123668498-123671637	3	+	123668498	123668498	8553170	2	526,140,	0,2999,
#Partially deleted in new
chr11	123724176	123741670	chr11:123724176-123741670	3	-	123725996	123730888	789624	8	2815,120,130,89,211,499,144,122,	0,3299,3956,4949,5438,6310,16216,17372,
#Partially deleted in new
chr11	123724779	123741671	chr11:123724779-123741671	1	-	123725996	123730888	789624	7	2212,120,130,89,211,499,123,	0,2696,3353,4346,4835,5707,16769,
#Partially deleted in new
chr11	123724779	123741655	chr11:123724779-123741655	1	-	123725996	123730888	789624	9	2212,120,130,89,211,499,76,120,107,	0,2696,3353,4346,4835,5707,15337,15637,16769,
#Partially deleted in new
chr11	123730509	123741667	chr11:123730509-123741667	0	-	123730509	123730888	789624	4	476,116,144,119,	0,9607,9883,11039,
#Partially deleted in new
chr11	123730751	123741673	chr11:123730751-123741673	0	-	123730751	123730888	789624	4	234,73,120,125,	0,9365,9665,10797,
#Partially deleted in new
chr11	123730807	123741675	chr11:123730807-123741675	0	-	123730807	123730807	8553170	4	178,116,120,127,	0,9309,9609,10741,
#Partially deleted in new
chr11	123730857	123741614	chr11:123730857-123741614	0	-	123730857	123730888	789624	5	128,110,116,144,66,	0,8576,9259,9535,10691,
#Partially deleted in new
chr11	123730859	123741660	chr11:123730859-123741660	0	-	123730859	123730859	8553170	3	64,409,112,	0,9268,10689,
#Partially deleted in new
chr11	123738623	123741665	chr11:123738623-123741665	0	-	123738623	123738623	8553170	4	287,116,120,117,	0,1493,1793,2925,
#Deleted in new
chr11	123753487	123754545	chr11:123753487-123754545	3	-	123753579	123754518	789624	1	1058,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	123763926	123764089	chr11:123763926-123764089	3	+	123763926	123763926	8553170	1	163,	0,
#Deleted in new
chr11	123805334	123806387	chr11:123805334-123806387	3	-	123805407	123806349	789624	1	1053,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	123839034	123841930	chr11:123839034-123841930	7	-	123839034	123839034	16724991	2	1262,801,	0,2095,
#Deleted in new
chr11	123841005	123841876	chr11:123841005-123841876	5	-	123841005	123841005	16724991	1	871,	0,
#Partially deleted in new
chr11	123861821	123862521	chr11:123861821-123862521	7	-	123861821	123861821	16724991	1	700,	0,
#Partially deleted in new
chr11	123882925	123885642	chr11:123882925-123885642	3	-	123883137	123885425	789624	4	427,135,147,398,	0,1149,1564,2319,
#Partially deleted in new
chr11	123883214	123885633	chr11:123883214-123885633	0	-	123883214	123885425	789624	4	138,135,147,239,	0,860,1275,2180,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	123902166	123909229	chr11:123902166-123909229	3	+	123906431	123907376	789624	2	91,2813,	0,4250,
#Partially deleted in new
chr11	123906145	123907476	chr11:123906145-123907476	1	+	123906431	123907376	789624	1	1331,	0,
#Partially deleted in new
chr11	123939542	123940637	chr11:123939542-123940637	3	+	123939616	123940573	789624	1	1095,	0,
#Partially deleted in new
chr11	123942784	123943873	chr11:123942784-123943873	3	-	123942866	123943838	789624	1	1089,	0,
#Deleted in new
chr11	123976660	123977781	chr11:123976660-123977781	3	-	123976695	123977691	789624	1	1121,	0,
#Deleted in new
chr11	123976660	123977781	chr11:123976660-123977781	1	-	123976695	123977664	789624	1	1121,	0,
#Deleted in new
chr11	123994162	123995161	chr11:123994162-123995161	3	-	123994162	123995161	789624	1	999,	0,
#Deleted in new
chr11	124009654	124010012	chr11:124009654-124010012	7	+	124009654	124009654	16724991	1	358,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	124012996	124018732	chr11:124012996-124018732	1	+	124015574	124016510	789624	3	116,322,3185,	0,1922,2551,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	124012996	124018732	chr11:124012996-124018732	3	+	124015574	124016510	789624	2	116,3185,	0,2551,
#Deleted in new
chr11	124015574	124016510	chr11:124015574-124016510	1	+	124015574	124016510	789624	1	936,	0,
#Deleted in new
chr11	124023012	124023948	chr11:124023012-124023948	3	+	124023012	124023948	789624	1	936,	0,
#Partially deleted in new
chr11	124026797	124030558	chr11:124026797-124030558	3	+	124029622	124030558	789624	2	70,963,	0,2798,
#Deleted in new
chr11	124029589	124030634	chr11:124029589-124030634	1	+	124029622	124030558	789624	1	1045,	0,
#Partially deleted in new
chr11	124036012	124041325	chr11:124036012-124041325	3	-	124038065	124039001	789624	2	3009,440,	0,4873,
#Deleted in new
chr11	124038065	124039001	chr11:124038065-124039001	1	-	124038065	124039001	789624	1	936,	0,
#Deleted in new
chr11	124054792	124055707	chr11:124054792-124055707	7	+	124054792	124054792	16724991	1	915,	0,
#Deleted in new
chr11	124093581	124094532	chr11:124093581-124094532	7	-	124093581	124093581	16724991	1	951,	0,
#Deleted in new
chr11	124104964	124111092	chr11:124104964-124111092	5	-	124104964	124104964	16724991	3	1061,174,244,	0,3269,5884,
#Deleted in new
chr11	124104964	124111092	chr11:124104964-124111092	7	-	124104964	124104964	16724991	2	1061,244,	0,5884,
#Deleted in new
chr11	124105099	124105968	chr11:124105099-124105968	5	-	124105099	124105099	16724991	1	869,	0,
#Partially deleted in new
chr11	124115361	124147721	chr11:124115361-124147721	3	+	124117511	124145945	789624	19	121,115,58,203,223,176,115,170,89,145,80,115,165,101,254,144,131,127,1856,	0,1204,2135,2311,2827,3171,3613,7598,8004,8298,8875,19558,20767,21212,21653,26236,27080,29875,30504,
#Partially deleted in new
chr11	124115403	124124841	chr11:124115403-124124841	1	+	124117511	124124320	789624	10	79,58,203,223,176,115,170,89,145,605,	0,2093,2269,2785,3129,3571,7556,7962,8256,8833,
#Partially deleted in new
chr11	124115403	124146909	chr11:124115403-124146909	1	+	124117511	124145945	789624	18	79,58,203,223,176,115,170,89,145,80,115,165,101,254,144,131,127,1044,	0,2093,2269,2785,3129,3571,7556,7962,8256,8833,19516,20725,21170,21611,26194,27038,29833,30462,
#Partially deleted in new
chr11	124115403	124124841	chr11:124115403-124124841	1	+	124117511	124124320	789624	11	79,115,58,203,223,176,115,170,89,145,605,	0,1162,2093,2269,2785,3129,3571,7556,7962,8256,8833,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	124115449	124124387	chr11:124115449-124124387	1	+	124117463	124124320	789624	10	1231,188,203,223,176,115,170,89,145,151,	0,1917,2223,2739,3083,3525,7510,7916,8210,8787,
#Deleted in new
chr11	124117494	124118152	chr11:124117494-124118152	0	+	124117494	124117494	8553170	2	60,480,	0,178,
#Deleted in new
chr11	124158420	124159356	chr11:124158420-124159356	7	+	124158420	124158420	16724991	1	936,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	124183344	124188780	chr11:124183344-124188780	3	+	124185269	124186208	789624	2	39,3522,	0,1914,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	124184243	124188780	chr11:124184243-124188780	1	+	124185269	124186208	789624	2	44,3522,	0,1015,
#Deleted in new
chr11	124185215	124186245	chr11:124185215-124186245	1	+	124185269	124186208	789624	1	1030,	0,
#Deleted in new
chr11	124207182	124208112	chr11:124207182-124208112	7	+	124207182	124207182	16724991	1	930,	0,
#Partially deleted in new
chr11	124211706	124215828	chr11:124211706-124215828	5	+	124211706	124211706	16724991	2	164,1091,	0,3031,
#Partially deleted in new
chr11	124211706	124215828	chr11:124211706-124215828	7	+	124211706	124211706	16724991	3	164,89,1091,	0,2865,3031,
#Deleted in new
chr11	124214766	124215687	chr11:124214766-124215687	5	+	124214766	124214766	16724991	1	921,	0,
#Deleted in new
chr11	124224731	124225639	chr11:124224731-124225639	7	+	124224731	124224731	16724991	1	908,	0,
#Deleted in new
chr11	124238419	124239486	chr11:124238419-124239486	7	+	124238419	124238419	16724991	2	424,424,	0,643,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	124241094	124254364	chr11:124241094-124254364	3	+	124249675	124250611	789624	3	270,80,4705,	0,6706,8565,
#Deleted in new
chr11	124249675	124250611	chr11:124249675-124250611	1	+	124249675	124250611	789624	1	936,	0,
#Partially deleted in new
chr11	124256375	124266218	chr11:124256375-124266218	3	+	124264931	124265867	789624	2	259,1301,	0,8542,
#Deleted in new
chr11	124264803	124265959	chr11:124264803-124265959	1	+	124264931	124265867	789624	1	1156,	0,
#Deleted in new
chr11	124264826	124265867	chr11:124264826-124265867	1	+	124264826	124265867	789624	1	1041,	0,
#Deleted in new
chr11	124273969	124274581	chr11:124273969-124274581	7	+	124273969	124273969	16724991	1	612,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	124302830	124313949	chr11:124302830-124313949	1	-	124309839	124310766	789624	3	7952,105,229,	0,8741,10890,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	124302830	124315099	chr11:124302830-124315099	3	-	124309839	124310766	789624	4	7952,105,62,166,	0,8741,10890,12103,
#Deleted in new
chr11	124309811	124310837	chr11:124309811-124310837	1	-	124309839	124310766	789624	1	1026,	0,
#Deleted in new
chr11	124319237	124320288	chr11:124319237-124320288	3	-	124319261	124320197	789624	1	1051,	0,
#Deleted in new
chr11	124324870	124325789	chr11:124324870-124325789	7	-	124324870	124324870	16724991	1	919,	0,
#Deleted in new
chr11	124338782	124339662	chr11:124338782-124339662	7	-	124338782	124338782	16724991	1	880,	0,
#Deleted in new
chr11	124357559	124358469	chr11:124357559-124358469	7	-	124357559	124357559	16724991	1	910,	0,
#Deleted in new
chr11	124365464	124367298	chr11:124365464-124367298	7	-	124365464	124365464	16724991	2	1105,73,	0,1761,
#Deleted in new
chr11	124365633	124366551	chr11:124365633-124366551	5	-	124365633	124365633	16724991	1	918,	0,
#Deleted in new
chr11	124376876	124377801	chr11:124376876-124377801	7	-	124376876	124376876	16724991	1	925,	0,
#Deleted in new
chr11	124382393	124384462	chr11:124382393-124384462	3	-	124382401	124383343	789624	2	967,89,	0,1980,
#Deleted in new
chr11	124382401	124383343	chr11:124382401-124383343	1	-	124382401	124383343	789624	1	942,	0,
#Partially deleted in new
chr11	124395533	124399024	chr11:124395533-124399024	3	-	124396409	124397351	789624	2	1835,335,	0,3156,
#Deleted in new
chr11	124396409	124397351	chr11:124396409-124397351	1	-	124396409	124397351	789624	1	942,	0,
#Deleted in new
chr11	124404233	124405102	chr11:124404233-124405102	7	-	124404233	124404233	16724991	1	869,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	124406996	124414792	chr11:124406996-124414792	3	-	124406996	124406996	8553170	3	3250,1420,306,	0,5287,7490,
#Deleted in new
chr11	124423903	124424893	chr11:124423903-124424893	3	-	124423941	124424871	789624	1	990,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	124437444	124445696	chr11:124437444-124445696	3	-	124440149	124441085	789624	3	3657,136,121,	0,4043,8131,
#Deleted in new
chr11	124440125	124441158	chr11:124440125-124441158	1	-	124440149	124441085	789624	1	1033,	0,
#Deleted in new
chr11	124460533	124461485	chr11:124460533-124461485	7	+	124460533	124460533	16724991	1	952,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	124476962	124482870	chr11:124476962-124482870	7	-	124476962	124476962	16724991	2	4982,234,	0,5674,
#Deleted in new
chr11	124480998	124481923	chr11:124480998-124481923	5	-	124480998	124480998	16724991	1	925,	0,
#Deleted in new
chr11	124516310	124517242	chr11:124516310-124517242	7	-	124516310	124516310	16724991	1	932,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	124531624	124531910	chr11:124531624-124531910	7	+	124531624	124531624	16724991	1	286,	0,
#Deleted in new
chr11	124538499	124539334	chr11:124538499-124539334	7	-	124538499	124538499	16724991	1	835,	0,
#Partially deleted in new
chr11	124539634	124545333	chr11:124539634-124545333	2	-	124539634	124539634	8553170	3	1085,131,64,	0,3606,5635,
#Deleted in new
chr11	124542681	124543679	chr11:124542681-124543679	1	-	124542721	124543654	789624	1	998,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	124566659	124575764	chr11:124566659-124575764	3	+	124570119	124571049	789624	2	45,5664,	0,3441,
#Deleted in new
chr11	124569996	124571142	chr11:124569996-124571142	1	+	124570119	124571049	789624	1	1146,	0,
#Deleted in new
chr11	124569996	124571141	chr11:124569996-124571141	1	+	124570068	124571049	789624	1	1145,	0,
#Partially deleted in new
chr11	124570722	124582942	chr11:124570722-124582942	0	+	124570722	124570722	8553170	3	313,241,34,	0,7326,12186,
#Deleted in new
chr11	124601583	124602238	chr11:124601583-124602238	7	+	124601583	124601583	16724991	1	655,	0,
#Partially deleted in new
chr11	124611489	124620356	chr11:124611489-124620356	3	+	124611556	124619935	789624	4	248,143,215,1061,	0,1490,5784,7806,
#Partially deleted in new
chr11	124622835	124632434	chr11:124622835-124632434	0	+	124622835	124622835	8553170	8	398,71,233,238,98,111,143,342,	0,2095,2835,3977,7552,7909,8439,9257,
#Partially deleted in new
chr11	124622860	124632452	chr11:124622860-124632452	0	+	124623083	124626932	789624	8	373,71,233,147,98,111,178,360,	0,2070,2810,4043,7527,7884,8379,9232,
#Partially deleted in new
chr11	124622869	124630428	chr11:124622869-124630428	0	+	124623083	124630428	789624	3	364,147,41,	0,4034,7518,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	124622874	124635398	chr11:124622874-124635398	0	+	124623083	124626932	789624	8	359,71,233,147,98,111,143,3306,	0,2056,2796,4029,7513,7870,8400,9218,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	124622879	124634802	chr11:124622879-124634802	3	+	124623083	124632238	0	9	354,71,233,137,147,98,111,143,2710,	0,2051,2791,3593,4024,7508,7865,8395,9213,
#Partially deleted in new
chr11	124622898	124626935	chr11:124622898-124626935	0	+	124622898	124622898	8553170	5	335,71,233,59,32,	0,2032,2772,3794,4005,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	124622993	124633424	chr11:124622993-124633424	0	+	124623083	124626988	789624	7	240,71,147,98,111,143,1332,	0,1937,3910,7394,7751,8281,9099,
#Partially deleted in new
chr11	124625765	124632238	chr11:124625765-124632238	0	+	124625765	124625765	8553170	7	138,59,147,98,111,143,146,	0,927,1138,4622,4979,5509,6327,
#Partially deleted in new
chr11	124626798	124632443	chr11:124626798-124632443	0	+	124626798	124626798	8553170	2	252,2056,	0,3589,
#Deleted in new
chr11	124629921	124632405	chr11:124629921-124632405	0	+	124629921	124629921	8553170	2	1496,313,	0,2171,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	124633112	124673881	chr11:124633112-124673881	3	-	124636950	124673708	789624	10	4090,196,158,134,110,178,139,176,162,240,	0,5429,6597,14252,14953,16506,21542,27515,36247,40529,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	124635788	124675679	chr11:124635788-124675679	1	-	124636950	124669483	789624	11	1414,196,158,134,110,178,139,176,162,145,109,	0,2753,3921,11576,12277,13830,18866,24839,33571,39469,39782,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	124636458	124636592	chr11:124636458-124636592	7	+	124636458	124636458	16724991	1	134,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	124636846	124676303	chr11:124636846-124676303	1	-	124636950	124669483	789624	12	356,196,158,134,110,178,139,176,162,145,107,119,	0,1695,2863,10518,11219,12772,17808,23781,32513,38411,38724,39338,
#Partially deleted in new
chr11	124654654	124669612	chr11:124654654-124669612	0	-	124654654	124654654	8553170	3	139,176,253,	0,5973,14705,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	124658873	124673821	chr11:124658873-124673821	0	-	124658873	124658873	8553170	3	1930,162,180,	0,10486,14768,
#Partially deleted in new
chr11	124669435	124695707	chr11:124669435-124695707	0	-	124669435	124669435	8553170	4	86,145,239,99,	0,5822,24847,26173,
#Partially deleted in new
chr11	124673797	124694661	chr11:124673797-124694661	1	+	124675264	124694446	789624	5	155,181,71,87,359,	0,1440,7591,17898,20505,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	124673843	124697518	chr11:124673843-124697518	3	+	124675264	124694446	789624	4	1575,71,87,3216,	0,7545,17852,20459,
#Partially deleted in new
chr11	124673909	124675875	chr11:124673909-124675875	0	+	124673909	124673909	8553170	3	43,181,210,	0,1328,1756,
#Partially deleted in new
chr11	124675313	124696686	chr11:124675313-124696686	0	+	124675313	124675313	8553170	5	105,71,87,140,510,	0,6075,16382,18989,20863,
#Partially deleted in new
chr11	124739845	124747210	chr11:124739845-124747210	3	+	124740084	124745724	789624	4	254,227,18,807,	0,5657,6119,6558,
#Partially deleted in new
chr11	124740044	124747206	chr11:124740044-124747206	1	+	124740084	124745724	789624	4	55,227,21,803,	0,5458,5917,6359,
#Deleted in new
chr11	124744633	124746337	chr11:124744633-124746337	3	-	124744633	124744633	8553170	3	262,84,99,	0,1281,1605,
#Partially deleted in new
chr11	124747471	124752238	chr11:124747471-124752238	3	-	124747534	124752137	789624	7	196,145,120,159,208,158,162,	0,918,1172,2236,3242,3951,4605,
#Partially deleted in new
chr11	124748105	124752193	chr11:124748105-124752193	1	-	124748385	124752137	789624	6	429,120,159,208,158,117,	0,538,1602,2608,3317,3971,
#Partially deleted in new
chr11	124752582	124762290	chr11:124752582-124762290	0	-	124752582	124762154	789624	4	104,127,123,206,	0,1631,2058,9502,
#Partially deleted in new
chr11	124753122	124762284	chr11:124753122-124762284	3	-	124753645	124762154	789624	7	839,127,123,156,202,179,200,	0,1091,1518,3084,3418,5226,8962,
#Partially deleted in new
chr11	124753122	124762280	chr11:124753122-124762280	0	-	124754632	124762154	789624	7	839,127,134,156,202,179,196,	0,1091,1507,3084,3418,5226,8962,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	124753122	124757537	chr11:124753122-124757537	0	-	124753122	124753122	8553170	5	839,127,123,156,997,	0,1091,1518,3084,3418,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	124753198	124757529	chr11:124753198-124757529	0	-	124753198	124753198	8553170	4	763,127,123,1323,	0,1015,1442,3008,
#Partially deleted in new
chr11	124754244	124762290	chr11:124754244-124762290	0	-	124754244	124762154	789624	4	96,123,156,206,	0,396,1962,7840,
#Deleted in new
chr11	124759128	124765936	chr11:124759128-124765936	3	+	124759128	124759128	789624	2	285,1208,	0,5600,
#Deleted in new
chr11	124762430	124765361	chr11:124762430-124765361	0	+	124762430	124762430	789624	2	45,633,	0,2298,
#Partially deleted in new
chr11	124766497	124800673	chr11:124766497-124800673	1	-	124767175	124800380	789624	4	1531,61,100,803,	0,6496,8221,33373,
#Partially deleted in new
chr11	124766515	124800389	chr11:124766515-124800389	3	-	124767175	124800380	789624	4	1513,61,256,519,	0,6478,8203,33355,
#Partially deleted in new
chr11	124766527	124776242	chr11:124766527-124776242	1	-	124767175	124774794	789624	3	1501,61,1524,	0,6466,8191,
#Partially deleted in new
chr11	124766615	124783290	chr11:124766615-124783290	0	-	124766615	124766615	8553170	5	1413,61,256,136,120,	0,6378,8103,12388,16555,
#Partially deleted in new
chr11	124767493	124800383	chr11:124767493-124800383	1	-	124773024	124800380	789624	3	535,61,513,	0,5500,32377,
#Partially deleted in new
chr11	124767833	124773380	chr11:124767833-124773380	0	-	124767833	124767833	8553170	2	195,387,	0,5160,
#Partially deleted in new
chr11	124767947	124800390	chr11:124767947-124800390	0	-	124773050	124800380	789624	4	81,61,113,520,	0,5046,6771,31923,
#Partially deleted in new
chr11	124774803	124800364	chr11:124774803-124800364	0	-	124774803	124774803	8553170	3	15,90,494,	0,4246,25067,
#Deleted in new
chr11	124789239	124792818	chr11:124789239-124792818	3	-	124789239	124789239	8553170	1	3579,	0,
#Deleted in new
chr11	124789243	124790069	chr11:124789243-124790069	0	-	124789243	124789243	8553170	1	826,	0,
#Deleted in new
chr11	124791227	124791660	chr11:124791227-124791660	7	+	124791227	124791227	16724991	1	433,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	124800449	124834487	chr11:124800449-124834487	3	+	124800449	124800449	789624	5	807,174,118,185,1602,	0,1534,4281,4870,32436,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	124800909	124806745	chr11:124800909-124806745	1	+	124800909	124800909	8553170	3	1248,118,1426,	0,3821,4410,
#Partially deleted in new
chr11	124807821	124808269	chr11:124807821-124808269	7	-	124807821	124807821	16724991	1	448,	0,
#Partially deleted in new
chr11	124865385	124881466	chr11:124865385-124881466	3	+	124865577	124881250	789624	28	352,327,158,121,139,128,125,172,206,82,166,167,122,226,122,172,186,24,43,140,195,139,213,152,111,162,191,228,	0,3416,4064,4562,4779,5215,5628,6995,7498,7924,8311,8684,9402,9725,10178,10568,10889,11775,11881,12133,12551,12912,13198,13804,14079,14401,15032,15853,
#Partially deleted in new
chr11	124868467	124881466	chr11:124868467-124881466	1	+	124868707	124881250	789624	27	661,158,121,139,128,125,172,206,82,166,167,122,226,122,172,186,24,43,140,195,139,213,152,111,162,191,228,	0,982,1480,1697,2133,2546,3913,4416,4842,5229,5602,6320,6643,7096,7486,7807,8693,8799,9051,9469,9830,10116,10722,10997,11319,11950,12771,
#Partially deleted in new
chr11	124876120	124881470	chr11:124876120-124881470	0	+	124876120	124876120	8553170	12	340,24,43,140,195,139,213,152,111,162,191,232,	0,1040,1146,1398,1816,2177,2463,3069,3344,3666,4297,5118,
#Partially deleted in new
chr11	124876465	124881466	chr11:124876465-124881466	0	+	124876465	124876465	8553170	7	1666,139,758,111,162,191,228,	0,1832,2118,2999,3321,3952,4773,
#Partially deleted in new
chr11	124876469	124881466	chr11:124876469-124881466	0	+	124876469	124876469	8553170	9	463,613,139,213,152,111,162,191,228,	0,1049,1828,2114,2720,2995,3317,3948,4769,
#Partially deleted in new
chr11	124876485	124881466	chr11:124876485-124881466	0	+	124876485	124876485	8553170	12	447,24,43,234,195,139,213,152,111,162,191,228,	0,675,781,1033,1451,1812,2098,2704,2979,3301,3932,4753,
#Deleted in new
chr11	124876485	124877671	chr11:124876485-124877671	0	+	124876485	124876485	8553170	4	253,24,43,153,	0,675,781,1033,
#Deleted in new
chr11	124876697	124879307	chr11:124876697-124879307	0	+	124876697	124876697	8553170	4	235,140,213,118,	0,821,1886,2492,
#Deleted in new
chr11	124876727	124877517	chr11:124876727-124877517	0	+	124876727	124876727	8553170	2	205,357,	0,433,
#Deleted in new
chr11	124876813	124877676	chr11:124876813-124877676	0	+	124876813	124876813	8553170	3	371,43,158,	0,453,705,
#Deleted in new
chr11	124876817	124877741	chr11:124876817-124877741	0	+	124876817	124876817	8553170	2	367,179,	0,745,
#Deleted in new
chr11	124876821	124877796	chr11:124876821-124877796	0	+	124876821	124876821	8553170	3	111,149,278,	0,339,697,
#Deleted in new
chr11	124876825	124878713	chr11:124876825-124878713	0	+	124876825	124876825	8553170	6	107,24,43,140,139,130,	0,335,441,693,1472,1758,
#Deleted in new
chr11	124876825	124877910	chr11:124876825-124877910	0	+	124876825	124876825	8553170	3	107,43,392,	0,441,693,
#Partially deleted in new
chr11	124876841	124881465	chr11:124876841-124881465	0	+	124876841	124876841	8553170	11	91,24,140,195,139,213,152,111,162,191,227,	0,319,677,1095,1456,1742,2348,2623,2945,3576,4397,
#Deleted in new
chr11	124876841	124879879	chr11:124876841-124879879	0	+	124876841	124876841	8553170	7	91,25,140,213,152,111,93,	0,443,677,1742,2348,2623,2945,
#Deleted in new
chr11	124876845	124878410	chr11:124876845-124878410	0	+	124876845	124876845	8553170	4	87,24,43,892,	0,315,421,673,
#Deleted in new
chr11	124876874	124879944	chr11:124876874-124879944	0	+	124876874	124876874	8553170	6	58,43,140,152,111,158,	0,392,644,2315,2590,2912,
#Partially deleted in new
chr11	124877387	124881463	chr11:124877387-124881463	1	+	124879490	124881250	789624	8	271,195,213,152,111,162,191,225,	0,549,1196,1802,2077,2399,3030,3851,
#Deleted in new
chr11	124878296	124880559	chr11:124878296-124880559	0	+	124878296	124878296	8553170	6	140,213,152,111,162,142,	0,287,893,1168,1490,2121,
#Deleted in new
chr11	124878364	124880515	chr11:124878364-124880515	0	+	124878364	124878364	8553170	5	432,152,111,162,98,	0,825,1100,1422,2053,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr11	124883690	124898281	chr11:124883690-124898281	3	-	124884890	124897795	789624	18	1223,207,359,237,142,108,264,137,43,186,169,113,229,128,121,158,330,556,	0,1350,2773,3286,3667,4042,7608,7975,9997,10169,10510,11390,11766,12094,12507,12822,13241,14035,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	124883690	124887789	chr11:124883690-124887789	3	+	124883690	124883690	8553170	2	673,71,	0,4028,
#Partially deleted in new
chr11	124884217	124893025	chr11:124884217-124893025	0	-	124884217	124884217	8553170	5	696,207,1377,264,1360,	0,823,2246,7081,7448,
#Partially deleted in new
chr11	124884710	124897868	chr11:124884710-124897868	1	-	124884890	124896635	789624	18	203,207,359,237,142,108,264,137,43,186,169,113,229,128,121,158,124,143,	0,330,1753,2266,2647,3022,6588,6955,8977,9149,9490,10370,10746,11074,11487,11802,12221,13015,
#Partially deleted in new
chr11	124886379	124893952	chr11:124886379-124893952	0	-	124886379	124886379	8553170	8	443,237,142,108,264,137,43,93,	0,597,978,1353,4919,5286,7308,7480,
#Deleted in new
chr11	124891303	124892126	chr11:124891303-124892126	3	+	124891303	124891303	8553170	2	288,189,	0,634,
#Deleted in new
chr11	124891487	124894445	chr11:124891487-124894445	0	-	124891487	124891487	8553170	5	75,137,43,186,245,	0,178,2200,2372,2713,
#Deleted in new
chr11	124895790	124896846	chr11:124895790-124896846	0	-	124895790	124895790	8553170	3	122,121,334,	0,407,722,
#Deleted in new
chr11	124895799	124898494	chr11:124895799-124898494	0	-	124895799	124895799	8553170	5	113,121,158,330,97,	0,398,713,1132,2598,
#Deleted in new
chr11	124895860	124898500	chr11:124895860-124898500	0	-	124895860	124895860	8553170	5	52,121,158,124,103,	0,337,652,1071,2537,
#Deleted in new
chr11	124896615	124897846	chr11:124896615-124897846	0	-	124896615	124896615	8553170	4	55,330,45,121,	0,316,972,1110,
#Deleted in new
chr11	124896771	124897868	chr11:124896771-124897868	0	-	124896771	124896771	8553170	2	490,143,	0,954,
#Partially deleted in new
chr11	124919192	124936412	chr11:124919192-124936412	3	-	124921137	124936006	789624	7	2248,71,74,94,282,342,491,	0,3195,3552,4147,4536,5535,16729,
#Deleted in new
chr11	124919243	124920677	chr11:124919243-124920677	3	+	124919750	124920017	789624	1	1434,	0,
#Partially deleted in new
chr11	124923614	124924926	chr11:124923614-124924926	0	-	124923614	124923614	8553170	2	396,199,	0,1113,
#Partially deleted in new
chr11	124924614	124936412	chr11:124924614-124936412	0	-	124924614	124924614	8553170	2	455,491,	0,11307,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	124950330	124953555	chr11:124950330-124953555	3	-	124950330	124950330	8553170	3	229,649,74,	0,571,3151,
#Partially deleted in new
chr11	124954120	125041489	chr11:124954120-125041489	3	+	124954732	125040711	789624	16	250,186,150,189,114,123,147,1008,123,108,75,93,104,174,149,900,	0,603,4994,5694,20975,23357,32621,33006,37340,38459,39048,49746,50988,84310,84800,86469,
#Partially deleted in new
chr11	124954120	125041487	chr11:124954120-125041487	1	+	124954732	125040711	789624	16	250,186,150,189,114,123,147,1008,123,108,75,93,104,174,182,898,	0,603,4994,5694,20975,23357,32621,33006,37340,38459,39048,49746,50988,84310,84767,86469,
#Partially deleted in new
chr11	125037455	125040963	chr11:125037455-125040963	0	+	125037455	125037455	8553170	4	59,174,149,374,	0,975,1465,3134,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	125038072	125039549	chr11:125038072-125039549	0	+	125038072	125038072	8553170	2	532,629,	0,848,
#Partially deleted in new
chr11	125063066	125089237	chr11:125063066-125089237	1	+	125063367	125088134	789624	18	360,82,94,79,136,77,167,38,153,91,63,86,49,74,79,98,65,1119,	0,13690,14163,14383,16045,16617,17547,18354,18687,19177,20748,21167,21758,21999,22328,22510,22887,25052,
#Partially deleted in new
chr11	125063301	125080647	chr11:125063301-125080647	0	+	125076808	125080647	789624	7	50,82,94,79,136,77,34,	0,13455,13928,14148,15810,16382,17312,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr11	125063334	125089235	chr11:125063334-125089235	0	+	125063334	125063334	8553170	16	92,82,94,79,136,77,167,38,153,91,63,49,74,79,98,3282,	0,13422,13895,14115,15777,16349,17279,18086,18419,18909,20480,21490,21731,22060,22242,22619,
#Partially deleted in new
chr11	125063335	125089235	chr11:125063335-125089235	3	+	125063367	125086231	789624	19	91,82,94,79,136,77,167,38,153,91,63,86,49,74,79,98,65,57,1117,	0,13421,13894,14114,15776,16348,17278,18085,18418,18908,20479,20898,21489,21730,22059,22241,22618,22868,24783,
#Deleted in new
chr11	125083138	125086397	chr11:125083138-125086397	0	+	125083138	125083138	8553170	8	286,63,49,74,79,98,65,194,	0,676,1686,1927,2256,2438,2815,3065,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	125083847	125090312	chr11:125083847-125090312	0	+	125083847	125083847	8553170	7	30,49,74,79,98,65,2194,	0,977,1218,1547,1729,2106,4271,
#Partially deleted in new
chr11	125096544	125111708	chr11:125096544-125111708	3	-	125097605	125102241	789624	5	1196,103,186,173,170,	0,4656,5587,6092,14994,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	125097034	125105041	chr11:125097034-125105041	0	-	125097034	125097034	8553170	2	706,3841,	0,4166,
#Partially deleted in new
chr11	125097070	125102809	chr11:125097070-125102809	1	-	125097605	125102241	789624	5	670,103,78,186,80,	0,4130,4373,5061,5659,
#Partially deleted in new
chr11	125097141	125111617	chr11:125097141-125111617	0	-	125097141	125097141	8553170	4	599,103,76,79,	0,4059,5592,14397,
#Partially deleted in new
chr11	125097242	125111579	chr11:125097242-125111579	1	-	125101228	125102241	789624	5	498,56,186,173,41,	0,3958,4889,5394,14296,
#Partially deleted in new
chr11	125097243	125111579	chr11:125097243-125111579	1	-	125097605	125102241	789624	5	497,103,220,173,41,	0,3957,4888,5393,14295,
#Partially deleted in new
chr11	125097243	125111579	chr11:125097243-125111579	1	-	125097605	125102241	789624	6	497,103,186,173,103,41,	0,3957,4888,5393,13400,14295,
#Partially deleted in new
chr11	125097256	125111589	chr11:125097256-125111589	0	-	125097256	125097256	789624	5	484,103,76,59,51,	0,3944,5477,13234,14282,
#Partially deleted in new
chr11	125097325	125111616	chr11:125097325-125111616	1	-	125097605	125102241	789624	7	415,103,186,76,59,103,30,	0,3875,4806,5408,13165,13318,14261,
#Partially deleted in new
chr11	125097338	125111598	chr11:125097338-125111598	1	-	125097605	125102241	789624	5	402,103,171,76,60,	0,3862,4793,5395,14200,
#Partially deleted in new
chr11	125097441	125111621	chr11:125097441-125111621	1	-	125101228	125102241	789624	5	299,56,220,76,83,	0,3759,4690,5292,14097,
#Partially deleted in new
chr11	125097485	125111604	chr11:125097485-125111604	1	-	125097605	125102241	789624	7	255,103,186,76,59,103,66,	0,3715,4646,5248,13005,13158,14053,
#Partially deleted in new
chr11	125097529	125111613	chr11:125097529-125111613	1	-	125097605	125102241	789624	6	211,103,186,76,103,27,	0,3671,4602,5204,13114,14057,
#Partially deleted in new
chr11	125101201	125111611	chr11:125101201-125111611	0	-	125101201	125102241	789624	4	102,678,103,27,	0,930,9442,10383,
#Partially deleted in new
chr11	125101202	125111632	chr11:125101202-125111632	0	-	125101202	125102241	789624	3	101,678,94,	0,929,10336,
#Partially deleted in new
chr11	125101255	125111763	chr11:125101255-125111763	0	-	125101255	125102241	789624	4	48,186,173,177,	0,876,1381,10331,
#Partially deleted in new
chr11	125102304	125111632	chr11:125102304-125111632	0	-	125102304	125102304	8553170	2	505,48,	0,9280,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	125113160	125126781	chr11:125113160-125126781	7	+	125113160	125113160	16724991	2	1785,1553,	0,12068,
#Deleted in new
chr11	125113568	125114799	chr11:125113568-125114799	5	+	125113568	125113568	16724991	1	1231,	0,
#Partially deleted in new
chr11	125132846	125139587	chr11:125132846-125139587	3	-	125132846	125132846	8553170	2	352,241,	0,6500,
#Partially deleted in new
chr11	125158460	125164609	chr11:125158460-125164609	3	-	125158460	125158460	789624	3	214,103,269,	0,2085,5880,
#Partially deleted in new
chr11	125164686	125431501	chr11:125164686-125431501	0	+	125164686	125164686	8553170	12	90,71,107,140,172,189,130,98,120,77,179,336,	0,70358,167132,203159,220864,233187,245509,246092,247059,264325,265276,266479,
#Partially deleted in new
chr11	125164694	125431544	chr11:125164694-125431544	0	+	125164694	125164694	8553170	11	82,107,140,172,189,130,98,120,77,179,379,	0,167124,203151,220856,233179,245501,246084,247051,264317,265268,266471,
#Partially deleted in new
chr11	125164705	125433389	chr11:125164705-125433389	3	+	125351305	125431392	789624	13	71,71,107,109,140,172,189,130,98,120,77,179,2224,	0,70339,167113,186578,203140,220845,233168,245490,246073,247040,264306,265257,266460,
#Partially deleted in new
chr11	125164725	125397983	chr11:125164725-125397983	0	+	125164725	125164725	8553170	6	51,71,107,109,140,110,	0,70319,167093,186558,203120,233148,
#Partially deleted in new
chr11	125164727	125398063	chr11:125164727-125398063	0	+	125164727	125164727	8553170	5	49,71,109,140,190,	0,70317,186556,203118,233146,
#Partially deleted in new
chr11	125164734	125367875	chr11:125164734-125367875	0	+	125351305	125367875	789624	7	42,71,113,107,73,109,30,	0,70310,74881,167084,167881,186549,203111,
#Partially deleted in new
chr11	125164751	125288150	chr11:125164751-125288150	0	+	125164751	125164751	8553170	3	25,71,425,	0,70293,122974,
#Partially deleted in new
chr11	125164753	125431544	chr11:125164753-125431544	0	+	125351305	125385586	789624	12	23,71,107,109,172,189,130,98,120,77,179,379,	0,70291,167065,186530,220797,233120,245442,246025,246992,264258,265209,266412,
#Partially deleted in new
chr11	125184186	125367880	chr11:125184186-125367880	0	+	125351305	125367880	789624	5	199,71,107,109,35,	0,50858,147632,167097,183659,
#Partially deleted in new
chr11	125188114	125191404	chr11:125188114-125191404	3	+	125188114	125188114	8553170	3	44,73,239,	0,2870,3051,
#Partially deleted in new
chr11	125240062	125397915	chr11:125240062-125397915	0	+	125240062	125240062	8553170	5	206,107,109,140,42,	0,91756,111221,127783,157811,
#Partially deleted in new
chr11	125240072	125367882	chr11:125240072-125367882	0	+	125240072	125240072	8553170	3	196,107,37,	0,91746,127773,
#Partially deleted in new
chr11	125258625	125266798	chr11:125258625-125266798	3	-	125258625	125258625	8553170	2	486,159,	0,8014,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	125277551	125277657	chr11:125277551-125277657	3	+	125277551	125277551	8553170	1	106,	0,
#Partially deleted in new
chr11	125330258	125385618	chr11:125330258-125385618	0	+	125351305	125385618	789624	5	130,107,109,140,68,	0,1560,21025,37587,55292,
#Partially deleted in new
chr11	125331612	125385688	chr11:125331612-125385688	0	+	125331612	125331612	8553170	3	313,140,138,	0,36233,53938,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	125385687	125433389	chr11:125385687-125433389	0	+	125385687	125385687	8553170	6	35,189,1827,77,179,2224,	0,12186,24351,43324,44275,45478,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	125442880	125592510	chr11:125442880-125592510	3	-	125446094	125489777	8553170	12	3231,66,76,81,272,169,87,100,356,94,119,93,	0,5621,9453,11249,12954,17617,20603,38653,46586,114842,130575,149537,
#Partially deleted in new
chr11	125445744	125451520	chr11:125445744-125451520	0	-	125445744	125445744	8553170	3	367,66,110,	0,2757,5666,
#Partially deleted in new
chr11	125445752	125481597	chr11:125445752-125481597	0	-	125445752	125445752	8553170	6	359,66,76,81,272,64,	0,2749,6581,8377,10082,35781,
#Partially deleted in new
chr11	125445760	125496310	chr11:125445760-125496310	1	-	125446094	125489777	789624	10	351,66,76,81,272,169,87,100,356,190,	0,2741,6573,8369,10074,14737,17723,35773,43706,50360,
#Partially deleted in new
chr11	125445764	125456286	chr11:125445764-125456286	0	-	125445764	125445764	8553170	5	347,66,76,81,452,	0,2737,6569,8365,10070,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	125445846	125453928	chr11:125445846-125453928	0	-	125445846	125445846	8553170	3	265,66,1595,	0,2655,6487,
#Partially deleted in new
chr11	125448506	125454357	chr11:125448506-125454357	0	-	125448506	125448506	8553170	3	61,76,228,	0,3827,5623,
#Deleted in new
chr11	125452333	125452825	chr11:125452333-125452825	0	-	125452333	125452333	8553170	2	76,318,	0,174,
#Partially deleted in new
chr11	125455449	125496317	chr11:125455449-125496317	0	-	125455449	125455449	8553170	5	657,169,100,356,197,	0,5048,26084,34017,40671,
#Partially deleted in new
chr11	125455951	125481633	chr11:125455951-125481633	0	-	125455951	125481633	789624	5	155,169,87,108,100,	0,4546,7532,13097,25582,
#Partially deleted in new
chr11	125456009	125481756	chr11:125456009-125481756	0	-	125456009	125456009	8553170	4	97,169,87,223,	0,4488,7474,25524,
#Partially deleted in new
chr11	125460240	125463540	chr11:125460240-125463540	0	-	125460240	125460240	8553170	2	426,57,	0,3243,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	125463249	125496218	chr11:125463249-125496218	0	-	125463249	125463249	8553170	4	321,100,356,98,	0,18284,26217,32871,
#Partially deleted in new
chr11	125488926	125496277	chr11:125488926-125496277	1	-	125489462	125489777	789624	2	896,157,	0,7194,
#Partially deleted in new
chr11	125489350	125495665	chr11:125489350-125495665	1	-	125489462	125489777	789624	2	472,278,	0,6037,
#Partially deleted in new
chr11	125489540	125496122	chr11:125489540-125496122	0	-	125489540	125489777	789624	2	282,287,	0,6295,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	125495213	125499528	chr11:125495213-125499528	3	+	125495213	125495213	8553170	2	402,3021,	0,1294,
#Partially deleted in new
chr11	125569215	125584687	chr11:125569215-125584687	3	+	125572527	125583683	789624	11	358,112,146,61,67,125,120,112,112,75,1167,	0,3242,6047,7039,8288,8917,9733,10877,11995,13130,14305,
#Partially deleted in new
chr11	125569279	125572569	chr11:125569279-125572569	0	+	125572527	125572569	789624	3	294,87,112,	0,824,3178,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	125569457	125579029	chr11:125569457-125579029	0	+	125572527	125579029	789624	8	116,112,146,129,61,67,125,81,	0,3000,5805,6345,6797,8046,8675,9491,
#Partially deleted in new
chr11	125569457	125584060	chr11:125569457-125584060	1	+	125572527	125583683	789624	11	116,112,104,61,67,125,120,112,112,75,540,	0,3000,5847,6797,8046,8675,9491,10635,11753,12888,14063,
#Partially deleted in new
chr11	125569457	125584027	chr11:125569457-125584027	1	+	125579026	125583683	789624	10	116,112,61,67,125,120,112,112,75,507,	0,3000,6797,8046,8675,9491,10635,11753,12888,14063,
#Partially deleted in new
chr11	125569457	125584209	chr11:125569457-125584209	1	+	125579026	125583683	789624	11	116,112,158,61,67,125,120,112,112,75,689,	0,3000,5793,6797,8046,8675,9491,10635,11753,12888,14063,
#Partially deleted in new
chr11	125569457	125584251	chr11:125569457-125584251	1	+	125572527	125583683	789624	11	57,112,146,61,67,125,120,112,112,75,731,	0,3000,5805,6797,8046,8675,9491,10635,11753,12888,14063,
#Partially deleted in new
chr11	125569476	125579068	chr11:125569476-125579068	0	+	125572527	125579068	789624	8	97,87,112,146,61,67,125,120,	0,627,2981,5786,6778,8027,8656,9472,
#Partially deleted in new
chr11	125569476	125577888	chr11:125569476-125577888	0	+	125569476	125569476	8553170	5	97,112,146,61,385,	0,2981,5786,6778,8027,
#Partially deleted in new
chr11	125569476	125583763	chr11:125569476-125583763	0	+	125572527	125575392	789624	12	97,112,100,61,67,171,125,120,112,112,75,243,	0,2981,5832,6778,8027,8259,8656,9472,10616,11734,12869,14044,
#Partially deleted in new
chr11	125569488	125584242	chr11:125569488-125584242	1	+	125572527	125583561	789624	10	85,112,146,61,67,125,120,112,75,722,	0,2969,5774,6766,8015,8644,9460,10604,12857,14032,
#Partially deleted in new
chr11	125569839	125577570	chr11:125569839-125577570	0	+	125572527	125577570	789624	5	108,112,104,61,67,	0,2618,5465,6415,7664,
#Partially deleted in new
chr11	125569858	125578191	chr11:125569858-125578191	0	+	125572527	125578191	789624	6	89,112,146,61,67,59,	0,2599,5404,6396,7645,8274,
#Partially deleted in new
chr11	125570283	125592568	chr11:125570283-125592568	0	-	125570283	125570283	789624	3	159,119,151,	0,3172,22134,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	125574718	125574818	chr11:125574718-125574818	3	+	125574718	125574718	8553170	1	100,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	125580779	125582397	chr11:125580779-125582397	0	+	125580779	125580779	8553170	2	543,52,	0,1566,
#Partially deleted in new
chr11	125591711	125602889	chr11:125591711-125602889	0	+	125595915	125602889	789624	5	176,123,61,122,87,	0,4169,5347,10591,11091,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr11	125592794	125623091	chr11:125592794-125623091	3	+	125595915	125620810	789624	18	124,123,61,122,146,91,107,165,181,156,92,156,189,117,103,189,116,2320,	0,3086,4264,9508,10008,11362,12834,13506,15314,16639,18633,19797,20194,21292,21529,25578,27216,27977,
#Partially deleted in new
chr11	125592818	125609898	chr11:125592818-125609898	0	+	125592818	125592818	8553170	10	100,123,61,122,146,91,107,165,181,465,	0,3062,4240,9484,9984,11338,12810,13482,15290,16615,
#Partially deleted in new
chr11	125592835	125620888	chr11:125592835-125620888	1	+	125595915	125620810	789624	19	83,88,123,61,122,146,91,107,165,181,156,92,156,189,117,103,189,116,117,	0,802,3045,4223,9467,9967,11321,12793,13465,15273,16598,18592,19756,20153,21251,21488,25537,27175,27936,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr11	125592857	125622721	chr11:125592857-125622721	1	+	125595915	125620810	8553170	19	61,48,123,61,122,146,91,107,165,181,156,92,156,189,117,103,189,116,1950,	0,1192,3023,4201,9445,9945,11299,12771,13443,15251,16576,18570,19734,20131,21229,21466,25515,27153,27914,
#Partially deleted in new
chr11	125592866	125620888	chr11:125592866-125620888	1	+	125602807	125620810	789624	17	52,61,122,146,91,107,165,181,156,92,156,189,117,103,189,116,117,	0,4192,9436,9936,11290,12762,13434,15242,16567,18561,19725,20122,21220,21457,25506,27144,27905,
#Partially deleted in new
chr11	125593168	125602839	chr11:125593168-125602839	0	+	125595915	125602839	789624	5	264,123,61,122,37,	0,2712,3890,9134,9634,
#Partially deleted in new
chr11	125594862	125602884	chr11:125594862-125602884	0	+	125595915	125602884	789624	5	154,123,61,122,82,	0,1018,2196,7440,7940,
#Partially deleted in new
chr11	125602756	125606465	chr11:125602756-125606465	0	+	125602756	125602756	8553170	4	192,91,107,165,	0,1400,2872,3544,
#Partially deleted in new
chr11	125603376	125606465	chr11:125603376-125606465	0	+	125603376	125603376	8553170	4	118,91,107,165,	0,780,2252,2924,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	125606209	125608404	chr11:125606209-125608404	0	+	125606209	125606209	8553170	2	256,296,	0,1899,
#Partially deleted in new
chr11	125606412	125613070	chr11:125606412-125613070	0	+	125606412	125613070	789624	5	53,135,156,156,82,	0,1696,3021,6179,6576,
#Partially deleted in new
chr11	125608147	125609736	chr11:125608147-125609736	0	+	125608147	125608147	8553170	3	142,156,27,	0,1286,1562,
#Partially deleted in new
chr11	125609418	125613151	chr11:125609418-125613151	0	+	125609418	125609418	8553170	4	171,92,156,163,	0,2009,3173,3570,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	125610708	125613140	chr11:125610708-125613140	0	+	125610708	125610708	8553170	3	665,156,152,	0,1883,2280,
#Partially deleted in new
chr11	125613683	125621226	chr11:125613683-125621226	0	+	125613683	125613683	8553170	5	520,103,189,116,455,	0,640,4689,6327,7088,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	125618517	125625215	chr11:125618517-125625215	0	+	125618517	125618517	8553170	4	44,116,114,343,	0,1493,2888,6355,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	125625135	125657145	chr11:125625135-125657145	1	+	125626768	125655320	0	13	877,85,224,65,70,189,105,96,109,178,132,102,1921,	0,1613,2471,4096,4255,8027,10293,12313,18656,18955,19376,28610,30089,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	125625135	125657145	chr11:125625135-125657145	1	+	125626768	125655320	0	12	877,85,224,65,70,189,105,96,109,178,132,1921,	0,1613,2471,4096,4255,8027,10293,12313,18656,18955,19376,30089,
#Partially deleted in new
chr11	125625664	125629437	chr11:125625664-125629437	0	+	125625760	125627623	789624	5	348,85,224,65,47,	0,1084,1942,3567,3726,
#Partially deleted in new
chr11	125625725	125655476	chr11:125625725-125655476	1	+	125625760	125655320	789624	12	287,85,65,70,189,105,96,109,178,132,102,252,	0,1023,3506,3665,7437,9703,11723,18066,18365,18786,28020,29499,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr11	125625973	125676255	chr11:125625973-125676255	3	+	125626768	125655320	0	14	39,85,224,65,70,189,105,96,109,178,132,102,123,328,	0,775,1633,3258,3417,7189,9455,11475,17818,18117,18538,27772,29251,49954,
#Partially deleted in new
chr11	125625976	125655710	chr11:125625976-125655710	1	+	125626826	125655320	0	12	36,85,65,70,189,105,96,109,178,132,102,486,	0,772,3255,3414,7186,9452,11472,17815,18114,18535,27769,29248,
#Partially deleted in new
chr11	125625992	125637544	chr11:125625992-125637544	0	+	125626768	125637544	789624	7	20,72,65,70,189,105,96,	0,756,3239,3398,7170,9436,11456,
#Partially deleted in new
chr11	125626001	125633351	chr11:125626001-125633351	0	+	125626768	125633351	789624	6	28,85,224,65,70,189,	0,747,1605,3230,3389,7161,
#Partially deleted in new
chr11	125626004	125633250	chr11:125626004-125633250	0	+	125626768	125633250	789624	6	30,85,224,65,70,88,	0,744,1602,3227,3386,7158,
#Partially deleted in new
chr11	125626006	125629417	chr11:125626006-125629417	0	+	125626768	125629417	789624	6	23,159,85,224,65,27,	0,410,742,1600,3225,3384,
#Deleted in new
chr11	125626228	125627668	chr11:125626228-125627668	0	+	125626768	125627668	789624	3	414,85,62,	0,520,1378,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	125626340	125657147	chr11:125626340-125657147	1	+	125626768	125655320	0	13	235,85,224,65,70,189,105,96,109,178,132,102,1923,	0,408,1266,2891,3050,6822,9088,11108,17451,17750,18171,27405,28884,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr11	125626557	125656335	chr11:125626557-125656335	1	+	125626768	125655320	0	13	276,224,65,70,189,105,96,109,178,132,102,123,130,	0,1049,2674,2833,6605,8871,10891,17234,17533,17954,27188,28667,29648,
#Partially deleted in new
chr11	125626748	125655713	chr11:125626748-125655713	1	+	125626768	125655320	789624	11	85,224,65,70,189,105,96,109,178,102,489,	0,858,2483,2642,6414,8680,10700,17043,17342,26997,28476,
#Partially deleted in new
chr11	125626748	125633193	chr11:125626748-125633193	0	+	125627664	125633193	789624	5	72,224,65,70,31,	0,858,2483,2642,6414,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	125633286	125636135	chr11:125633286-125636135	0	+	125633286	125633286	8553170	2	65,707,	0,2142,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	125642860	125655586	chr11:125642860-125655586	0	+	125642860	125642860	8553170	5	1040,178,132,102,362,	0,1230,1651,10885,12364,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	125644571	125676255	chr11:125644571-125676255	0	+	125644571	125655320	789624	5	72,102,123,130,328,	0,9174,10653,11634,31356,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	125649745	125649887	chr11:125649745-125649887	3	+	125649745	125649745	8553170	1	142,	0,
#Partially deleted in new
chr11	125671521	125681123	chr11:125671521-125681123	3	-	125672592	125680780	789624	4	1196,120,501,395,	0,4837,6275,9207,
#Partially deleted in new
chr11	125672342	125680831	chr11:125672342-125680831	1	-	125672592	125680780	789624	4	375,120,444,103,	0,4016,5511,8386,
#Partially deleted in new
chr11	125672482	125680831	chr11:125672482-125680831	1	-	125672592	125680780	789624	5	235,120,267,69,103,	0,3876,5314,5746,8246,
#Partially deleted in new
chr11	125672492	125680874	chr11:125672492-125680874	1	-	125672592	125680780	789624	5	225,120,222,69,146,	0,3866,5304,5736,8236,
#Deleted in new
chr11	125746292	125749867	chr11:125746292-125749867	3	+	125746304	125748733	789624	5	64,36,36,123,1268,	0,368,1083,1407,2307,
#Deleted in new
chr11	125746293	125748046	chr11:125746293-125748046	0	+	125746293	125746293	8553170	2	403,676,	0,1077,
#Deleted in new
chr11	125746296	125748837	chr11:125746296-125748837	1	+	125746304	125748733	789624	4	60,36,123,238,	0,364,1403,2303,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	125776112	125778819	chr11:125776112-125778819	3	-	125777381	125778773	789624	4	1406,129,24,98,	0,1761,2439,2609,
#Partially deleted in new
chr11	125776893	125778810	chr11:125776893-125778810	1	-	125777381	125778773	789624	3	625,24,89,	0,1658,1828,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	125788110	125791600	chr11:125788110-125791600	3	+	125788151	125790602	789624	3	90,123,1123,	0,1275,2367,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	125833315	125840069	chr11:125833315-125840069	3	+	125833359	125838427	789624	3	102,117,1764,	0,4552,4990,
#Deleted in new
chr11	125833315	125835900	chr11:125833315-125835900	0	+	125833315	125833315	8553170	2	102,899,	0,1686,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	125833315	125839100	chr11:125833315-125839100	1	+	125833359	125838427	789624	2	102,795,	0,4990,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	125873030	125874398	chr11:125873030-125874398	3	-	125873030	125873030	8553170	2	655,153,	0,1215,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	125873448	125874528	chr11:125873448-125874528	1	-	125873448	125873448	8553170	1	1080,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	125883613	125900644	chr11:125883613-125900644	3	+	125899368	125900268	789624	4	404,50,55,1301,	0,7809,15490,15730,
#Partially deleted in new
chr11	125887059	125900648	chr11:125887059-125900648	1	+	125899368	125900268	789624	3	706,50,1305,	0,4363,12284,
#Partially deleted in new
chr11	125887781	125900617	chr11:125887781-125900617	1	+	125899368	125900268	789624	3	479,50,1274,	0,3641,11562,
#Partially deleted in new
chr11	125893484	125896330	chr11:125893484-125896330	1	-	125893784	125896284	789624	3	802,566,424,	0,1739,2422,
#Partially deleted in new
chr11	125893485	125903221	chr11:125893485-125903221	3	-	125893784	125896284	789624	4	801,566,424,52,	0,1738,2421,9684,
#Partially deleted in new
chr11	125893485	125903221	chr11:125893485-125903221	1	-	125893784	125895543	789624	3	801,566,52,	0,1738,9684,
#Partially deleted in new
chr11	125895660	125903221	chr11:125895660-125903221	0	-	125895660	125896284	789624	3	129,424,52,	0,246,7509,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	125895969	125903221	chr11:125895969-125903221	0	-	125895969	125896284	789624	3	361,166,52,	0,4709,7200,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	125903246	125938916	chr11:125903246-125938916	3	-	125903246	125903246	8553170	3	123,163,231,	0,28058,35439,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	125903347	125943684	chr11:125903347-125943684	0	+	125908226	125939260	789624	9	83,45,136,93,103,115,178,1030,801,	0,2205,2726,4848,5053,7016,7963,35777,39536,
#Partially deleted in new
chr11	125903375	125923083	chr11:125903375-125923083	1	+	125908226	125922881	0	12	55,67,45,136,93,103,115,178,238,163,189,264,	0,1836,2177,2698,4820,5025,6988,7935,13638,15252,17815,19444,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	125904362	125928829	chr11:125904362-125928829	3	+	125904517	125922881	0	12	218,67,45,136,93,103,115,178,238,163,189,6010,	0,849,1190,1711,3833,4038,6001,6948,12651,14265,16828,18457,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	125904508	125922256	chr11:125904508-125922256	0	+	125904508	125921387	789624	11	72,67,45,136,93,103,115,178,238,163,1066,	0,703,1044,1565,3687,3892,5855,6802,12505,14119,16682,
#Partially deleted in new
chr11	125904668	125910394	chr11:125904668-125910394	0	+	125904668	125910394	789624	7	99,67,45,136,93,103,31,	0,543,884,1405,3527,3732,5695,
#Partially deleted in new
chr11	125906068	125923104	chr11:125906068-125923104	0	+	125906068	125922881	789624	9	141,93,103,115,118,238,163,189,285,	0,2127,2332,4295,5302,10945,12559,15122,16751,
#Partially deleted in new
chr11	125920957	125923263	chr11:125920957-125923263	0	+	125920957	125920957	8553170	2	422,444,	0,1862,
#Partially deleted in new
chr11	125921188	125922882	chr11:125921188-125922882	0	+	125921188	125922110	789624	3	191,206,63,	0,911,1631,
#Partially deleted in new
chr11	125921218	125922664	chr11:125921218-125922664	0	+	125921218	125921218	8553170	2	161,565,	0,881,
#Partially deleted in new
chr11	125925168	125931403	chr11:125925168-125931403	1	-	125925168	125925168	8553170	3	367,103,99,	0,835,6136,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	125940495	125941193	chr11:125940495-125941193	3	-	125940495	125940495	8553170	1	698,	0,
#Partially deleted in new
chr11	125946055	125958647	chr11:125946055-125958647	3	+	125946055	125955914	789624	10	82,351,276,276,249,261,291,297,123,2831,	0,1630,2249,3958,4854,5757,7344,8031,9001,9761,
#Partially deleted in new
chr11	125951791	125956319	chr11:125951791-125956319	0	+	125951791	125951791	8553170	3	282,53,503,	0,3823,4025,
#Partially deleted in new
chr11	125951865	125955937	chr11:125951865-125955937	0	+	125951865	125955656	789624	4	208,125,53,121,	0,2221,3749,3951,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr11	125955795	126063292	chr11:125955795-126063292	1	-	125960941	126023476	0	20	5310,344,80,281,222,123,106,182,204,132,175,299,354,270,288,144,147,273,137,67,	0,5859,22508,25253,28076,33841,38488,39075,41411,45923,48106,49963,54545,59445,61292,62534,63823,65452,67605,107430,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	125957451	126004445	chr11:125957451-126004445	1	-	125960941	126004058	789624	11	3654,275,80,281,222,123,106,182,204,132,544,	0,4272,20852,23597,26420,32185,36832,37419,39755,44267,46450,
#Partially deleted in new
chr11	125960678	126063292	chr11:125960678-126063292	3	-	125960941	126023476	0	20	427,275,80,281,222,123,106,182,204,132,175,299,354,270,288,144,147,273,137,67,	0,1045,17625,20370,23193,28958,33605,34192,36528,41040,43223,45080,49662,54562,56409,57651,58940,60569,62722,102547,
#Partially deleted in new
chr11	126003905	126021522	chr11:126003905-126021522	0	-	126003905	126021522	789624	8	171,299,354,270,288,144,147,275,	0,1853,6435,11335,13182,14424,15713,17342,
#Partially deleted in new
chr11	126005392	126018473	chr11:126005392-126018473	0	-	126010889	126018473	789624	7	282,299,354,108,270,288,144,	0,366,4948,5418,9848,11695,12937,
#Partially deleted in new
chr11	126014817	126023539	chr11:126014817-126023539	0	-	126014817	126014817	8553170	6	693,288,144,147,273,139,	0,2270,3512,4801,6430,8583,
#Partially deleted in new
chr11	126019618	126063292	chr11:126019618-126063292	0	-	126019618	126023476	789624	4	147,273,137,67,	0,1629,3782,43607,
#Partially deleted in new
chr11	126019686	126062811	chr11:126019686-126062811	0	-	126019686	126023476	789624	4	79,273,137,233,	0,1561,3714,42892,
#Partially deleted in new
chr11	126021262	126063335	chr11:126021262-126063335	0	-	126021262	126023476	789624	3	258,137,64,	0,2138,42009,
#Deleted in new
chr11	126067538	126068601	chr11:126067538-126068601	7	+	126067538	126067538	16724991	1	1063,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	126100504	126102413	chr11:126100504-126102413	3	-	126100504	126100504	8553170	1	1909,	0,
#Partially deleted in new
chr11	126160713	126176035	chr11:126160713-126176035	3	+	126160713	126160713	8553170	2	132,437,	0,14885,
#Deleted in new
chr11	126179496	126179698	chr11:126179496-126179698	7	-	126179496	126179496	16724991	1	202,	0,
#Partially deleted in new
chr11	126202093	126211692	chr11:126202093-126211692	3	-	126203417	126211638	0	7	1564,98,145,94,202,166,243,	0,2137,3374,3594,7427,8796,9356,
#Partially deleted in new
chr11	126202413	126211646	chr11:126202413-126211646	1	-	126203417	126211638	0	7	1244,98,72,74,202,166,197,	0,1817,3054,3294,7107,8476,9036,
#Partially deleted in new
chr11	126202781	126211629	chr11:126202781-126211629	0	-	126202781	126202781	8553170	7	876,98,145,94,232,166,180,	0,1449,2686,2906,6709,8108,8668,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	126203321	126206512	chr11:126203321-126206512	0	-	126203321	126203321	8553170	4	336,98,145,825,	0,909,2146,2366,
#Partially deleted in new
chr11	126204324	126211692	chr11:126204324-126211692	0	-	126204324	126211638	789624	5	4,52,117,166,243,	0,1143,5281,6565,7125,
#Partially deleted in new
chr11	126205570	126211407	chr11:126205570-126211407	0	-	126205570	126205570	8553170	5	42,94,202,166,75,	0,117,3950,5319,5762,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	126205718	126209723	chr11:126205718-126209723	0	-	126205718	126205718	8553170	3	63,300,203,	0,535,3802,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	126208610	126209027	chr11:126208610-126209027	3	-	126208610	126208610	8553170	2	262,100,	0,317,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	126209039	126211630	chr11:126209039-126211630	0	-	126209039	126209039	8553170	3	683,166,181,	0,1850,2410,
#Partially deleted in new
chr11	126209550	126211297	chr11:126209550-126211297	0	-	126209550	126209550	8553170	2	172,408,	0,1339,
#Partially deleted in new
chr11	126211413	126262986	chr11:126211413-126262986	3	+	126235001	126262133	789624	9	417,69,93,253,228,129,286,60,867,	0,17811,23581,29378,39092,42891,45153,50011,50706,
#Partially deleted in new
chr11	126211723	126262984	chr11:126211723-126262984	1	+	126235001	126262133	789624	8	107,69,93,253,129,286,60,865,	0,17501,23271,29068,42581,44843,49701,50396,
#Partially deleted in new
chr11	126211765	126254377	chr11:126211765-126254377	0	+	126211765	126211765	8553170	5	65,69,253,228,73,	0,17459,29026,38740,42539,
#Partially deleted in new
chr11	126211771	126261485	chr11:126211771-126261485	0	+	126235001	126261485	789624	9	59,69,136,93,253,228,129,286,58,	0,17453,21814,23223,29020,38734,42533,44795,49656,
#Partially deleted in new
chr11	126211772	126262631	chr11:126211772-126262631	1	+	126235001	126262133	789624	8	58,93,253,228,129,286,57,512,	0,23222,29019,38733,42532,44794,49655,50347,
#Partially deleted in new
chr11	126211772	126262268	chr11:126211772-126262268	1	+	126235001	126262133	789624	7	58,93,253,129,286,60,149,	0,23222,29019,42532,44794,49652,50347,
#Partially deleted in new
chr11	126211776	126250625	chr11:126211776-126250625	0	+	126235001	126250625	789624	5	54,112,93,253,120,	0,17448,23218,29015,38729,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	126214259	126214478	chr11:126214259-126214478	3	-	126214259	126214259	8553170	1	219,	0,
#Partially deleted in new
chr11	126229223	126256805	chr11:126229223-126256805	0	+	126235001	126256805	789624	5	70,93,253,129,239,	0,5771,11568,25081,27343,
#Partially deleted in new
chr11	126229223	126241281	chr11:126229223-126241281	0	+	126229223	126229223	8553170	3	70,93,490,	0,5771,11568,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	126245034	126245282	chr11:126245034-126245282	3	+	126245034	126245034	8553170	1	248,	0,
#Partially deleted in new
chr11	126260398	126262921	chr11:126260398-126262921	0	+	126260398	126260398	8553170	2	1086,802,	0,1721,
#Deleted in new
chr11	126262918	126268959	chr11:126262918-126268959	3	-	126263915	126268804	0	14	1126,99,164,214,173,87,119,92,154,160,161,164,84,272,	0,1272,1457,2040,2349,2818,3044,3268,3557,3844,4256,4630,5084,5769,
#Deleted in new
chr11	126263473	126268982	chr11:126263473-126268982	1	-	126263915	126268804	0	13	571,99,164,214,173,87,119,92,154,160,161,164,295,	0,717,902,1485,1794,2263,2489,2713,3002,3289,3701,4075,5214,
#Deleted in new
chr11	126263840	126264755	chr11:126263840-126264755	0	-	126263840	126263840	8553170	2	449,380,	0,535,
#Deleted in new
chr11	126265020	126265657	chr11:126265020-126265657	0	-	126265020	126265020	8553170	2	152,390,	0,247,
#Deleted in new
chr11	126265079	126266401	chr11:126265079-126266401	0	-	126265079	126265079	8553170	5	93,173,87,119,215,	0,188,657,883,1107,
#Deleted in new
chr11	126267173	126268920	chr11:126267173-126268920	0	-	126267173	126267173	8553170	3	539,84,233,	0,829,1514,
#Deleted in new
chr11	126267577	126269144	chr11:126267577-126269144	0	-	126267577	126267577	8553170	4	135,84,180,159,	0,425,1110,1408,
#Partially deleted in new
chr11	126269054	126276477	chr11:126269054-126276477	0	+	126269054	126269054	8553170	4	237,77,161,84,	0,6739,7004,7339,
#Partially deleted in new
chr11	126269132	126278124	chr11:126269132-126278124	3	+	126269206	126277689	789624	11	159,221,111,119,95,102,77,161,130,105,690,	0,2304,3836,4203,5794,6194,6661,6926,7261,7938,8302,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	126269134	126278131	chr11:126269134-126278131	0	+	126269134	126269134	8553170	11	157,205,111,119,91,102,77,161,130,105,697,	0,3343,3834,4201,5796,6192,6659,6924,7259,7936,8300,
#Partially deleted in new
chr11	126269156	126271881	chr11:126269156-126271881	0	+	126269156	126269156	8553170	2	135,445,	0,2280,
#Partially deleted in new
chr11	126269170	126277663	chr11:126269170-126277663	0	+	126269170	126269170	8553170	9	121,111,119,102,77,161,130,178,229,	0,3798,4165,6156,6623,6888,7223,7827,8264,
#Partially deleted in new
chr11	126269170	126277840	chr11:126269170-126277840	0	+	126269206	126273030	789624	10	121,111,119,95,102,77,161,130,105,406,	0,3798,4165,5756,6156,6623,6888,7223,7900,8264,
#Partially deleted in new
chr11	126269170	126273309	chr11:126269170-126273309	0	+	126269170	126269170	8553170	2	245,341,	0,3798,
#Partially deleted in new
chr11	126269189	126278069	chr11:126269189-126278069	0	+	126269206	126275351	789624	10	102,221,111,116,102,77,161,130,105,635,	0,2247,3779,4149,6137,6604,6869,7204,7881,8245,
#Partially deleted in new
chr11	126269191	126275012	chr11:126269191-126275012	0	+	126269191	126269191	8553170	5	100,137,111,119,86,	0,2527,3777,4144,5735,
#Partially deleted in new
chr11	126269193	126275349	chr11:126269193-126275349	0	+	126269193	126269193	8553170	4	222,111,139,423,	0,3775,4122,5733,
#Partially deleted in new
chr11	126269200	126275867	chr11:126269200-126275867	0	+	126269200	126269200	8553170	7	91,438,111,119,95,102,74,	0,2019,3768,4135,5726,6126,6593,
#Partially deleted in new
chr11	126269208	126277931	chr11:126269208-126277931	1	+	126269372	126277689	789624	11	207,221,111,119,95,102,77,161,130,105,497,	0,2228,3760,4127,5718,6118,6585,6850,7185,7862,8226,
#Partially deleted in new
chr11	126270944	126278126	chr11:126270944-126278126	0	+	126270944	126270944	8553170	9	713,111,119,102,77,161,130,105,692,	0,2024,2391,4382,4849,5114,5449,6126,6490,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	126273033	126274089	chr11:126273033-126274089	0	+	126273033	126273033	8553170	2	46,754,	0,302,
#Partially deleted in new
chr11	126273088	126275143	chr11:126273088-126275143	0	+	126273088	126273088	8553170	2	366,217,	0,1838,
#Partially deleted in new
chr11	126273090	126276219	chr11:126273090-126276219	0	+	126273090	126273090	8553170	4	364,102,77,161,	0,2236,2703,2968,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	126273913	126278126	chr11:126273913-126278126	0	+	126273913	126273913	8553170	5	1957,161,130,105,692,	0,2145,2480,3157,3521,
#Deleted in new
chr11	126276911	126277844	chr11:126276911-126277844	0	+	126276911	126276911	8553170	2	264,410,	0,523,
#Deleted in new
chr11	126278256	126278577	chr11:126278256-126278577	7	-	126278256	126278256	16724991	1	321,	0,
#Partially deleted in new
chr11	126283064	126291569	chr11:126283064-126291569	0	+	126283064	126283064	8553170	3	89,159,297,	0,7738,8208,
#Partially deleted in new
chr11	126283072	126292687	chr11:126283072-126292687	0	+	126290894	126291507	789624	6	81,169,124,159,145,211,	0,6592,7389,7730,8352,9404,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	126283086	126294933	chr11:126283086-126294933	3	+	126290894	126293687	0	5	67,124,159,579,1266,	0,7375,7716,9390,10581,
#Partially deleted in new
chr11	126283105	126290897	chr11:126283105-126290897	0	+	126283105	126283105	8553170	5	48,131,169,124,95,	0,5337,6559,7356,7697,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	126283109	126293244	chr11:126283109-126293244	1	+	126290894	126293117	0	5	44,169,124,159,768,	0,6555,7352,7693,9367,
#Partially deleted in new
chr11	126283117	126294684	chr11:126283117-126294684	1	+	126290894	126293687	0	6	36,153,124,159,579,1017,	0,6547,7344,7685,9359,10550,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	126290855	126298845	chr11:126290855-126298845	0	+	126290894	126293687	0	4	106,579,972,588,	0,1621,2812,7402,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	126292921	126294254	chr11:126292921-126294254	3	-	126292921	126292921	8553170	2	365,127,	0,1206,
#Partially deleted in new
chr11	126294297	126304318	chr11:126294297-126304318	0	-	126294297	126294297	8553170	2	305,111,	0,9910,
#Partially deleted in new
chr11	126294306	126297126	chr11:126294306-126297126	3	-	126294306	126294306	8553170	2	350,159,	0,2661,
#Partially deleted in new
chr11	126303751	126345749	chr11:126303751-126345749	3	+	126304080	126345613	0	6	530,175,146,114,111,403,	0,2818,27653,34534,39555,41595,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	126327865	126345754	chr11:126327865-126345754	1	+	126330339	126345613	8553170	7	192,144,243,146,114,111,408,	0,879,2328,3539,10420,15441,17481,
#Partially deleted in new
chr11	126331403	126345749	chr11:126331403-126345749	0	+	126331403	126331403	8553170	3	147,111,403,	0,11903,13943,
#Partially deleted in new
chr11	126336413	126345716	chr11:126336413-126345716	0	+	126336413	126336413	8553170	3	1986,111,370,	0,6893,8933,
#Partially deleted in new
chr11	126340888	126355579	chr11:126340888-126355579	3	-	126340888	126340888	789624	2	1434,138,	0,14553,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	126350171	126355587	chr11:126350171-126355587	1	-	126350171	126350171	8553170	3	1606,537,146,	0,4207,5270,
#Partially deleted in new
chr11	126355639	126407026	chr11:126355639-126407026	0	+	126358424	126406150	789624	5	203,97,76,85,84,	0,2775,50456,50833,51303,
#Partially deleted in new
chr11	126355659	126414604	chr11:126355659-126414604	3	+	126406155	126414047	789624	11	183,76,73,81,98,61,96,190,144,144,644,	0,50436,50813,51283,51592,51914,52439,52647,53608,57845,58301,
#Partially deleted in new
chr11	126355659	126414608	chr11:126355659-126414608	0	+	126406155	126408311	789624	10	183,76,85,81,98,96,190,144,144,648,	0,50436,50813,51283,51592,52439,52647,53608,57845,58301,
#Partially deleted in new
chr11	126355683	126414638	chr11:126355683-126414638	1	+	126406155	126414047	789624	11	159,76,85,81,98,61,96,190,144,144,678,	0,50412,50789,51259,51568,51890,52415,52623,53584,57821,58277,
#Partially deleted in new
chr11	126355893	126414047	chr11:126355893-126414047	1	+	126406155	126414047	789624	11	409,76,73,81,98,61,96,190,144,144,87,	0,50202,50579,51049,51358,51680,52205,52413,53374,57611,58067,
#Partially deleted in new
chr11	126355973	126414575	chr11:126355973-126414575	1	+	126406155	126414047	789624	11	329,76,85,81,98,61,96,190,144,144,615,	0,50122,50499,50969,51278,51600,52125,52333,53294,57531,57987,
#Partially deleted in new
chr11	126375019	126408804	chr11:126375019-126408804	0	+	126375019	126375019	8553170	8	105,76,85,81,98,61,96,498,	0,31076,31453,31923,32232,32554,33079,33287,
#Deleted in new
chr11	126376772	126376893	chr11:126376772-126376893	7	-	126376772	126376772	16724991	1	121,	0,
#Partially deleted in new
chr11	126392174	126407627	chr11:126392174-126407627	0	+	126406155	126407627	789624	6	180,76,85,81,98,54,	0,13921,14298,14768,15077,15399,
#Partially deleted in new
chr11	126393227	126408496	chr11:126393227-126408496	0	+	126406155	126408496	789624	8	76,76,85,81,98,61,96,190,	0,12868,13245,13715,14024,14346,14871,15079,
#Partially deleted in new
chr11	126403217	126407349	chr11:126403217-126407349	0	+	126406155	126407349	789624	5	210,76,85,81,98,	0,2878,3255,3725,4034,
#Partially deleted in new
chr11	126403415	126414641	chr11:126403415-126414641	1	+	126406155	126414047	789624	11	71,76,85,81,116,61,96,190,144,144,681,	0,2680,3057,3527,3818,4158,4683,4891,5852,10089,10545,
#Partially deleted in new
chr11	126403415	126414638	chr11:126403415-126414638	1	+	126406155	126414047	789624	11	71,76,85,81,98,61,96,190,144,144,678,	0,2680,3057,3527,3836,4158,4683,4891,5852,10089,10545,
#Deleted in new
chr11	126405586	126408498	chr11:126405586-126408498	0	+	126405586	126405586	8553170	8	113,76,85,81,98,61,96,192,	0,509,886,1356,1665,1987,2512,2720,
#Partially deleted in new
chr11	126405781	126414638	chr11:126405781-126414638	1	+	126406155	126414047	789624	10	390,85,81,98,61,96,190,144,144,678,	0,691,1161,1470,1792,2317,2525,3486,7723,8179,
#Partially deleted in new
chr11	126406186	126414606	chr11:126406186-126414606	1	+	126406489	126414047	789624	10	124,85,81,98,61,96,190,144,144,646,	0,286,756,1065,1387,1912,2120,3081,7318,7774,
#Partially deleted in new
chr11	126406194	126414608	chr11:126406194-126414608	1	+	126406459	126414047	789624	9	363,81,98,61,96,190,144,144,648,	0,748,1057,1379,1904,2112,3073,7310,7766,
#Partially deleted in new
chr11	126406459	126414047	chr11:126406459-126414047	1	+	126406459	126414047	789624	9	86,81,98,61,96,190,144,144,87,	0,483,792,1114,1639,1847,2808,7045,7501,
#Partially deleted in new
chr11	126406502	126440344	chr11:126406502-126440344	0	+	126406502	126406502	8553170	7	55,81,98,61,190,144,159,	0,440,749,1071,1804,2765,33683,
#Partially deleted in new
chr11	126406781	126413997	chr11:126406781-126413997	0	+	126408361	126413997	789624	8	242,98,61,96,190,144,144,37,	0,470,792,1317,1525,2486,6723,7179,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	126408449	126414554	chr11:126408449-126414554	0	+	126408449	126408449	8553170	4	47,144,252,594,	0,818,4947,5511,
#Partially deleted in new
chr11	126423358	127000759	chr11:126423358-127000759	3	-	126424579	127000509	0	17	1665,87,110,108,36,199,101,127,128,149,106,151,158,150,150,78,305,	0,2279,5820,8060,11909,13452,17090,21620,23400,25650,32990,39798,49950,97956,103179,139476,577096,
#Partially deleted in new
chr11	126423494	127000520	chr11:126423494-127000520	1	-	126424579	127000509	789624	16	1529,87,110,108,199,101,127,128,149,106,151,158,150,150,78,66,	0,2143,5684,7924,13316,16954,21484,23264,25514,32854,39662,49814,97820,103043,139340,576960,
#Partially deleted in new
chr11	126429178	126440869	chr11:126429178-126440869	0	-	126429178	126429178	8553170	5	110,108,199,101,48,	0,2240,7632,11270,11643,
#Partially deleted in new
chr11	126429178	126440882	chr11:126429178-126440882	0	-	126429178	126429178	8553170	5	110,108,199,101,32,	0,2240,7632,11270,11672,
#Partially deleted in new
chr11	126430941	127000810	chr11:126430941-127000810	1	-	126431311	127000509	0	14	585,36,199,101,127,128,149,106,151,158,150,150,78,356,	0,4326,5869,9507,14037,15817,18067,25407,32215,42367,90373,95596,131893,569513,
#Partially deleted in new
chr11	126436863	126440818	chr11:126436863-126440818	0	-	126436863	126436863	8553170	2	146,370,	0,3585,
#Partially deleted in new
chr11	126543946	126610948	chr11:126543946-126610948	3	+	126543946	126543946	8553170	2	298,288,	0,66714,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	126549283	127003460	chr11:126549283-127003460	0	-	126549283	126549283	8553170	4	1364,78,416,205,	0,13551,451171,453972,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	126549417	127001165	chr11:126549417-127001165	0	-	126549417	126549417	8553170	3	1230,78,711,	0,13417,451037,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	126549538	127000770	chr11:126549538-127000770	0	-	126549538	126549538	8553170	3	1113,78,316,	0,13296,450916,
#Partially deleted in new
chr11	126652851	126682103	chr11:126652851-126682103	0	+	126652851	126652851	789624	2	78,321,	0,28931,
#Partially deleted in new
chr11	126656085	126682104	chr11:126656085-126682104	3	+	126656085	126656085	789624	2	86,322,	0,25697,
#Partially deleted in new
chr11	126920187	126940659	chr11:126920187-126940659	3	-	126920187	126920187	8553170	2	355,211,	0,20261,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	126934885	126937150	chr11:126934885-126937150	3	-	126934885	126934885	8553170	1	2265,	0,
#Partially deleted in new
chr11	126940745	126945088	chr11:126940745-126945088	3	+	126940745	126940745	789624	3	179,152,161,	0,3570,4182,
#Partially deleted in new
chr11	126940793	126945090	chr11:126940793-126945090	0	+	126940793	126940793	8553170	3	131,135,163,	0,3539,4134,
#Deleted in new
chr11	126988457	126988542	chr11:126988457-126988542	3	-	126988457	126988457	5263520	1	85,	0,
#Deleted in new
chr11	126992451	126995458	chr11:126992451-126995458	3	+	126992451	126992451	8553170	2	83,379,	0,2628,
#Deleted in new
chr11	127002909	127006058	chr11:127002909-127006058	0	+	127002909	127002909	789624	3	1415,161,192,	0,2117,2957,
#Deleted in new
chr11	127003402	127004235	chr11:127003402-127004235	7	+	127003402	127003402	16724991	2	426,405,	0,428,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	127021753	127099585	chr11:127021753-127099585	1	+	127021753	127021753	8553170	8	154,202,351,308,96,134,174,312,	0,13721,31584,51235,54229,58680,76678,77520,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	127021764	127116181	chr11:127021764-127116181	3	+	127021764	127021764	8553170	10	143,202,351,108,89,252,332,142,125,250,	0,13710,31573,83737,84391,86603,87821,89323,92264,94167,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	127067001	127101320	chr11:127067001-127101320	1	+	127067001	127067001	789624	3	116,174,2047,	0,31430,32272,
#Partially deleted in new
chr11	127109453	127139719	chr11:127109453-127139719	0	+	127109453	127109453	8553170	5	464,142,125,123,245,	0,1634,4575,27735,30021,
#Partially deleted in new
chr11	127119325	127139735	chr11:127119325-127139735	0	+	127119325	127119325	8553170	3	177,123,261,	0,17863,20149,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	127127783	127172363	chr11:127127783-127172363	1	+	127127783	127127783	8553170	4	135,123,164,494,	0,9405,43735,44086,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	127188884	127200058	chr11:127188884-127200058	3	+	127188884	127188884	8553170	5	30,352,100,154,893,	0,1583,2594,3882,10281,
#Partially deleted in new
chr11	127190768	127223449	chr11:127190768-127223449	0	+	127190768	127190768	8553170	5	51,100,154,87,22,	0,710,1998,32463,32659,
#Partially deleted in new
chr11	127271028	127311936	chr11:127271028-127311936	1	+	127271028	127271028	8553170	3	145,142,64,	0,40049,40844,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	127406027	127406332	chr11:127406027-127406332	3	-	127406027	127406027	8553170	1	305,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	127407850	127408148	chr11:127407850-127408148	3	+	127407850	127407850	8553170	1	298,	0,
#Deleted in new
chr11	127657567	127657877	chr11:127657567-127657877	7	+	127657567	127657567	16724991	1	310,	0,
#Deleted in new
chr11	127940912	127941654	chr11:127940912-127941654	7	-	127940912	127940912	16724991	1	742,	0,
#Partially deleted in new
chr11	128180426	128183554	chr11:128180426-128183554	0	+	128180426	128180426	8553170	2	197,754,	0,2374,
#Partially deleted in new
chr11	128208748	128241433	chr11:128208748-128241433	3	+	128208748	128208748	8553170	5	194,180,333,115,156,	0,1788,2638,5233,32529,
#Partially deleted in new
chr11	128208828	128241441	chr11:128208828-128241441	0	+	128208828	128208828	8553170	4	114,82,115,164,	0,2809,5153,32449,
#Partially deleted in new
chr11	128211436	128241433	chr11:128211436-128241433	0	+	128211436	128211436	8553170	3	283,115,156,	0,2545,29841,
#Partially deleted in new
chr11	128458760	128522310	chr11:128458760-128522310	1	-	128462360	128521994	0	4	3816,119,261,398,	0,4748,21430,63152,
#Partially deleted in new
chr11	128458764	128587558	chr11:128458764-128587558	1	-	128462360	128573130	0	10	3812,119,261,249,78,201,120,145,83,71,	0,4744,21426,26058,27304,30525,31692,97526,114297,128723,
#Partially deleted in new
chr11	128460243	128522201	chr11:128460243-128522201	1	-	128462360	128521994	0	7	2333,119,249,78,201,120,289,	0,3265,24579,25825,29046,30213,61669,
#Partially deleted in new
chr11	128461493	128522264	chr11:128461493-128522264	1	-	128462538	128521994	0	7	1083,51,249,78,201,120,352,	0,18907,23329,24575,27796,28963,60419,
#Partially deleted in new
chr11	128461765	128522304	chr11:128461765-128522304	3	-	128462360	128521994	0	8	811,119,261,249,78,201,120,392,	0,1743,18425,23057,24303,27524,28691,60147,
#Deleted in new
chr11	128462543	128463950	chr11:128462543-128463950	0	-	128462543	128462543	8553170	2	33,442,	0,965,
#Partially deleted in new
chr11	128489469	128505394	chr11:128489469-128505394	0	-	128489469	128490574	789624	3	21,120,404,	0,987,15521,
#Deleted in new
chr11	128522389	128522449	chr11:128522389-128522449	3	+	128522389	128522389	5263520	1	60,	0,
#Partially deleted in new
chr11	128526141	128530389	chr11:128526141-128530389	3	+	128526141	128526141	789624	4	174,886,75,252,	0,391,2869,3996,
#Partially deleted in new
chr11	128536411	128587542	chr11:128536411-128587542	0	-	128536411	128536411	8553170	4	372,145,83,55,	0,19879,36650,51076,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	128571807	128587523	chr11:128571807-128587523	0	-	128571807	128571807	8553170	3	507,83,38,	0,1254,15678,
#Deleted in new
chr11	128614339	128615236	chr11:128614339-128615236	0	-	128614339	128614339	8553170	1	897,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	128614346	128686433	chr11:128614346-128686433	0	-	128614346	128614346	8553170	5	337,71,80,138,377,	0,6357,37510,50633,71710,
#Deleted in new
chr11	128615866	128621806	chr11:128615866-128621806	0	-	128615866	128615866	8553170	3	984,71,102,	0,4837,5838,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	128629652	128686428	chr11:128629652-128686428	0	-	128629652	128629652	8553170	4	121,80,138,202,	0,22204,35327,56574,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	128681239	128686922	chr11:128681239-128686922	3	-	128681239	128681239	789624	2	1220,696,	0,4987,
#Partially deleted in new
chr11	128686534	128813266	chr11:128686534-128813266	1	+	128758316	128810988	0	7	167,212,66,66,60,48,2808,	0,71580,95423,118831,120645,122622,123924,
#Partially deleted in new
chr11	128686534	128812416	chr11:128686534-128812416	0	+	128758195	128781976	789624	7	167,212,66,66,60,48,1958,	0,71580,95423,118831,120645,122622,123924,
#Deleted in new
chr11	128691671	128696023	chr11:128691671-128696023	3	-	128691671	128691671	789624	3	450,737,111,	0,983,4241,
#Partially deleted in new
chr11	128692981	128772813	chr11:128692981-128772813	0	+	128758195	128772813	789624	4	162,212,155,32,	0,65133,75136,79800,
#Partially deleted in new
chr11	128693769	128813267	chr11:128693769-128813267	3	+	128694258	128810988	0	9	507,212,155,204,66,66,60,48,2809,	0,64345,74348,79012,88188,111596,113410,115387,116689,
#Partially deleted in new
chr11	128693915	128813266	chr11:128693915-128813266	1	+	128764789	128810988	0	10	361,212,171,155,204,66,66,60,48,2808,	0,64199,70735,74202,78866,88042,111450,113264,115241,116543,
#Partially deleted in new
chr11	128694087	128812417	chr11:128694087-128812417	0	+	128694258	128764669	789624	10	189,212,171,155,204,66,66,60,48,1959,	0,64027,70563,74030,78694,87870,111278,113092,115069,116371,
#Partially deleted in new
chr11	128694091	128813267	chr11:128694091-128813267	1	+	128758195	128810988	0	10	185,54,212,155,204,66,66,60,48,2809,	0,54145,64023,74026,78690,87866,111274,113088,115065,116367,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	128758105	128768516	chr11:128758105-128768516	0	+	128758105	128758105	8553170	2	221,399,	0,10012,
#Partially deleted in new
chr11	128803875	128812416	chr11:128803875-128812416	0	+	128803875	128803875	8553170	3	3364,48,1958,	0,5281,6583,
#Partially deleted in new
chr11	128836314	128867296	chr11:128836314-128867296	1	-	128839124	128840243	789624	2	3950,124,	0,30858,
#Partially deleted in new
chr11	128838014	128867373	chr11:128838014-128867373	1	-	128839124	128840243	789624	3	2250,170,201,	0,12706,29158,
#Partially deleted in new
chr11	128838056	128867370	chr11:128838056-128867370	1	-	128839124	128840243	789624	3	2208,133,198,	0,28466,29116,
#Partially deleted in new
chr11	128838154	128867373	chr11:128838154-128867373	1	-	128839124	128840243	789624	4	2110,170,133,201,	0,12566,28368,29018,
#Deleted in new
chr11	128838743	128842534	chr11:128838743-128842534	3	-	128839124	128842417	789624	2	1521,153,	0,3638,
#Partially deleted in new
chr11	128839825	128867281	chr11:128839825-128867281	0	-	128839825	128840243	789624	3	439,170,109,	0,10895,27347,
#Partially deleted in new
chr11	128840063	128867296	chr11:128840063-128867296	0	-	128840063	128840063	8553170	3	201,200,124,	0,10657,27109,
#Partially deleted in new
chr11	128880324	128880668	chr11:128880324-128880668	7	-	128880324	128880324	16724991	1	344,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	128891355	128921035	chr11:128891355-128921035	3	+	128911273	128916731	789624	3	366,947,4627,	0,19908,25053,
#Partially deleted in new
chr11	128891468	128916853	chr11:128891468-128916853	1	+	128911273	128916731	789624	4	253,89,947,445,	0,18383,19795,24940,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	128899564	128905697	chr11:128899564-128905697	3	-	128902556	128904566	789624	4	3149,145,181,149,	0,3802,4866,5984,
#Partially deleted in new
chr11	128902419	128904510	chr11:128902419-128904510	0	-	128902419	128902419	8553170	3	294,141,80,	0,947,2011,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	128902556	128906035	chr11:128902556-128906035	1	-	128902556	128904566	789624	4	157,145,181,126,	0,810,1874,3353,
#Partially deleted in new
chr11	128911183	128916731	chr11:128911183-128916731	1	+	128911273	128916731	789624	2	1027,323,	0,5225,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	128934730	128942927	chr11:128934730-128942927	1	-	128935036	128937818	789624	4	314,112,217,134,	0,1807,2947,8063,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	128935369	128943143	chr11:128935369-128943143	0	-	128935369	128935369	8553170	2	2525,350,	0,7424,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	128935369	128942927	chr11:128935369-128942927	3	-	128935590	128937818	789624	4	343,112,217,134,	0,1168,2308,7424,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	128935376	128943399	chr11:128935376-128943399	1	-	128937491	128937818	789624	2	2518,606,	0,7417,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	128935590	128937818	chr11:128935590-128937818	1	-	128935590	128937818	789624	3	110,112,141,	0,947,2087,
#Partially deleted in new
chr11	128936536	128943145	chr11:128936536-128943145	0	-	128937491	128937818	789624	3	113,1073,352,	0,225,6257,
#Partially deleted in new
chr11	128965059	129192198	chr11:128965059-129192198	3	-	128968906	129192198	0	22	6100,980,879,72,146,196,146,108,83,145,103,150,82,78,123,93,138,87,85,92,109,116,	0,7393,9064,11503,13710,15493,16356,16769,20943,21464,22963,33259,75868,97220,98842,99781,101671,128561,158386,159743,199259,227023,
#Partially deleted in new
chr11	128967924	128998402	chr11:128967924-128998402	0	-	128967924	128967924	8553170	11	3235,2550,72,146,196,146,108,83,145,103,84,	0,4528,8638,10845,12628,13491,13904,18078,18599,20098,30394,
#Partially deleted in new
chr11	128967946	129024193	chr11:128967946-129024193	1	-	128968906	128998424	0	13	3213,980,879,72,146,196,146,108,83,145,103,150,335,	0,4506,6177,8616,10823,12606,13469,13882,18056,18577,20076,30372,55912,
#Partially deleted in new
chr11	128968762	129164345	chr11:128968762-129164345	1	-	128974091	129164321	789624	19	6240,72,146,196,146,108,83,145,103,150,82,78,123,93,138,87,85,92,27,	0,7800,10007,11790,12653,13066,17240,17761,19260,29556,72165,93517,95139,96078,97968,124858,154683,156040,195556,
#Partially deleted in new
chr11	128968868	128998458	chr11:128968868-128998458	1	-	128968906	128998424	0	12	2291,980,879,72,146,196,146,108,83,145,103,140,	0,3584,5255,7694,9901,11684,12547,12960,17134,17655,19154,29450,
#Deleted in new
chr11	128980486	128981554	chr11:128980486-128981554	0	-	128980486	128980486	8553170	2	262,139,	0,929,
#Partially deleted in new
chr11	128985878	129066813	chr11:128985878-129066813	0	-	128985878	128985878	8553170	9	207,145,103,150,82,78,123,93,83,	0,645,2144,12440,55049,76401,78023,78962,80852,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	128993236	128993340	chr11:128993236-128993340	3	-	128993236	128993236	8553170	1	104,	0,
#Partially deleted in new
chr11	129066743	129279324	chr11:129066743-129279324	0	-	129066743	129164423	789624	7	125,87,85,42,92,109,179,	0,26877,56702,57144,58059,97575,212402,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	129202965	129203070	chr11:129202965-129203070	3	+	129202965	129202965	8553170	1	105,	0,
#Deleted in new
chr11	129295285	129296481	chr11:129295285-129296481	7	-	129295285	129295285	16724991	1	1196,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	129375939	129452279	chr11:129375939-129452279	3	+	129376035	129451402	789624	4	283,301,85,1144,	0,60811,66895,75196,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	129436173	129438321	chr11:129436173-129438321	0	+	129436173	129436173	8553170	1	2148,	0,
#Deleted in new
chr11	129537868	129538114	chr11:129537868-129538114	7	+	129537868	129537868	16724991	1	246,	0,
#Partially deleted in new
chr11	129591492	129612110	chr11:129591492-129612110	3	+	129591492	129591492	8553170	2	128,399,	0,20219,
#Partially deleted in new
chr11	129612115	129617269	chr11:129612115-129617269	3	-	129612115	129612115	789624	4	331,163,229,259,	0,2209,3191,4895,
#Deleted in new
chr11	129788063	129788190	chr11:129788063-129788190	7	-	129788063	129788063	16724991	1	127,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	129815818	129860003	chr11:129815818-129860003	3	+	129852482	129858685	789624	6	80,186,207,185,146,1430,	0,36656,38791,39889,41494,42755,
#Partially deleted in new
chr11	129815849	129828253	chr11:129815849-129828253	0	+	129815849	129815849	8553170	3	49,91,107,	0,11174,12297,
#Partially deleted in new
chr11	129815862	129857479	chr11:129815862-129857479	0	+	129815862	129815862	8553170	6	36,107,186,207,185,167,	0,12284,36612,38747,39845,41450,
#Partially deleted in new
chr11	129815870	129852961	chr11:129815870-129852961	0	+	129815870	129815870	8553170	2	28,487,	0,36604,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	129850331	129859215	chr11:129850331-129859215	1	+	129852482	129858685	789624	6	273,186,207,185,146,642,	0,2143,4278,5376,6981,8242,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr11	129863635	129894441	chr11:129863635-129894441	3	-	129864724	129892849	0	26	1215,136,107,768,213,271,221,80,124,107,175,61,47,80,66,127,109,181,85,74,102,175,128,202,156,83,	0,1330,2241,5858,9248,10109,10477,10865,11157,11721,13085,13689,14673,14828,17807,18091,18450,18815,19486,20434,21109,21799,22681,24958,29079,30723,
#Partially deleted in new
chr11	129864469	129893009	chr11:129864469-129893009	1	-	129864724	129892888	0	25	381,136,107,768,213,271,221,80,124,107,175,61,47,80,66,127,109,181,85,74,138,175,128,202,295,	0,496,1407,5024,8414,9275,9643,10031,10323,10887,12251,12855,13839,13994,16973,17257,17616,17981,18652,19600,20275,20965,21847,24124,28245,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr11	129864703	129894441	chr11:129864703-129894441	1	-	129864724	129892849	0	27	147,136,107,768,213,271,221,80,124,107,175,61,47,80,66,127,109,181,85,74,102,175,128,202,156,89,83,	0,262,1173,4790,8180,9041,9409,9797,10089,10653,12017,12621,13605,13760,16739,17023,17382,17747,18418,19366,20041,20731,21613,23890,28011,28593,29655,
#Partially deleted in new
chr11	129870092	129894441	chr11:129870092-129894441	0	-	129870092	129892849	789624	23	169,213,271,221,80,124,107,175,61,41,80,66,127,109,181,85,74,138,175,128,202,156,83,	0,2791,3652,4020,4408,4700,5264,6628,7232,8218,8371,11350,11634,11993,12358,13029,13977,14652,15342,16224,18501,22622,24266,
#Deleted in new
chr11	129872588	129873817	chr11:129872588-129873817	0	-	129872588	129872588	8553170	2	508,73,	0,1156,
#Partially deleted in new
chr11	129884743	129895590	chr11:129884743-129895590	0	-	129886338	129892849	789624	6	139,175,128,202,156,95,	0,691,1573,3850,7971,10752,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	129885510	129895584	chr11:129885510-129895584	0	-	129885510	129892849	789624	7	99,128,202,156,89,80,89,	0,806,3083,7204,7786,8848,9985,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	129885510	129895584	chr11:129885510-129895584	0	-	129885510	129892849	789624	8	99,128,202,156,91,93,80,89,	0,806,3083,7204,7551,7782,8848,9985,
#Partially deleted in new
chr11	129888312	129892876	chr11:129888312-129892876	1	-	129888455	129892849	789624	3	175,202,162,	0,281,4402,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	129888654	129895557	chr11:129888654-129895557	0	-	129888654	129892849	789624	6	141,156,40,89,80,62,	0,4060,4407,4642,5704,6841,
#Partially deleted in new
chr11	129892709	129894275	chr11:129892709-129894275	0	-	129892709	129892849	789624	3	161,91,312,	0,352,1254,
#Partially deleted in new
chr11	129899705	130002835	chr11:129899705-130002835	1	-	129902312	129960964	789624	22	2811,104,181,141,315,201,111,180,156,348,12,243,130,118,73,204,242,226,60,165,187,114,	0,5932,10770,12379,14998,15954,17421,18833,23542,25176,29704,31310,32396,35395,37892,42720,45065,47439,55806,58040,61190,103016,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr11	129899714	129947553	chr11:129899714-129947553	1	-	129902312	129947406	789624	16	2802,104,181,315,201,111,180,156,348,243,130,118,73,204,242,409,	0,5923,10761,14989,15945,17412,18824,23533,25167,31301,32387,35386,37883,42711,45056,47430,
#Partially deleted in new
chr11	129899714	130002835	chr11:129899714-130002835	3	-	129902312	129960964	789624	21	2802,104,181,141,315,201,111,180,156,348,243,130,118,73,204,242,226,60,165,187,114,	0,5923,10761,12370,14989,15945,17412,18824,23533,25167,31301,32387,35386,37883,42711,45056,47430,55797,58031,61181,103007,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr11	129899716	129947622	chr11:129899716-129947622	1	-	129902312	129947406	789624	18	2800,104,181,102,315,201,111,180,156,348,12,243,130,118,73,204,242,478,	0,5921,10759,12407,14987,15943,17410,18822,23531,25165,29693,31299,32385,35384,37881,42709,45054,47428,
#Partially deleted in new
chr11	129899716	130002835	chr11:129899716-130002835	1	-	129902312	129960964	789624	21	2800,104,181,102,315,201,111,180,156,348,243,130,118,73,204,242,148,60,165,187,114,	0,5921,10759,12407,14987,15943,17410,18822,23531,25165,31299,32385,35384,37881,42709,45054,47428,55795,58029,61179,103005,
#Partially deleted in new
chr11	129902284	129947461	chr11:129902284-129947461	1	-	129902312	129947406	789624	18	232,104,181,141,315,201,111,180,156,348,12,243,130,118,73,204,242,317,	0,3353,8191,9800,12419,13375,14842,16254,20963,22597,27125,28731,29817,32816,35313,40141,42486,44860,
#Partially deleted in new
chr11	129902339	129942590	chr11:129902339-129942590	0	-	129902339	129942542	789624	15	177,104,181,141,315,201,111,180,156,348,243,130,118,73,165,	0,3298,8136,9745,12364,13320,14787,16199,20908,22542,28676,29762,32761,35258,40086,
#Partially deleted in new
chr11	129947185	130002804	chr11:129947185-130002804	0	-	129947185	129960964	789624	4	185,165,187,83,	0,10560,13710,55536,
#Partially deleted in new
chr11	129948055	130002785	chr11:129948055-130002785	0	-	129948055	129960964	789624	5	52,60,165,187,64,	0,7456,9690,12840,54666,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	130002937	130004356	chr11:130002937-130004356	3	+	130002937	130002937	8553170	1	1419,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	130008585	130009765	chr11:130008585-130009765	7	+	130008585	130008585	16724991	1	1180,	0,
#Deleted in new
chr11	130032865	130033220	chr11:130032865-130033220	7	-	130032865	130032865	16724991	1	355,	0,
#Partially deleted in new
chr11	130040364	130041071	chr11:130040364-130041071	7	+	130040364	130040364	16724991	1	707,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr11	130068146	130144804	chr11:130068146-130144804	3	+	130069977	130143448	8553170	19	12,187,174,124,113,197,209,168,131,75,159,129,100,153,36,86,75,156,1458,	0,1749,41282,42391,52559,53467,54158,55465,58553,59619,60901,61891,65482,67416,69109,72251,73351,73772,75200,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	130069836	130110637	chr11:130069836-130110637	0	+	130069836	130069836	8553170	4	246,144,174,100,	0,31533,39592,40701,
#Partially deleted in new
chr11	130069836	130143522	chr11:130069836-130143522	0	+	130069977	130120720	789624	15	246,113,197,209,131,75,159,129,100,153,36,86,75,156,176,	0,50869,51777,52468,56863,57929,59211,60201,63792,65726,67419,70561,71661,72082,73510,
#Partially deleted in new
chr11	130069890	130121718	chr11:130069890-130121718	0	+	130069890	130069890	8553170	5	192,174,27,53,105,	0,39538,40647,50875,51723,
#Partially deleted in new
chr11	130069893	130122377	chr11:130069893-130122377	0	+	130069893	130069893	8553170	5	189,174,48,98,73,	0,39535,40644,51819,52411,
#Partially deleted in new
chr11	130069893	130121766	chr11:130069893-130121766	0	+	130069893	130069893	8553170	4	189,124,113,153,	0,40644,50812,51720,
#Partially deleted in new
chr11	130069893	130143806	chr11:130069893-130143806	1	+	130069977	130143448	0	16	189,174,124,113,197,209,131,75,159,129,100,153,86,75,156,460,	0,39535,40644,50812,51720,52411,56806,57872,59154,60144,63735,65669,70504,71604,72025,73453,
#Partially deleted in new
chr11	130069893	130120823	chr11:130069893-130120823	0	+	130069893	130069893	8553170	4	121,174,124,118,	0,39535,40644,50812,
#Partially deleted in new
chr11	130069893	130122470	chr11:130069893-130122470	0	+	130069893	130069893	8553170	4	189,153,65,166,	0,39535,51852,52411,
#Partially deleted in new
chr11	130069893	130110560	chr11:130069893-130110560	0	+	130069977	130100272	789624	4	189,156,174,23,	0,30376,39535,40644,
#Partially deleted in new
chr11	130069893	130110659	chr11:130069893-130110659	0	+	130069977	130110659	789624	4	189,75,174,122,	0,32032,39535,40644,
#Partially deleted in new
chr11	130069893	130109823	chr11:130069893-130109823	0	+	130069893	130069893	8553170	2	189,395,	0,39535,
#Partially deleted in new
chr11	130069893	130120777	chr11:130069893-130120777	0	+	130069893	130069893	8553170	4	189,189,124,72,	0,39535,40644,50812,
#Partially deleted in new
chr11	130069893	130120823	chr11:130069893-130120823	0	+	130069977	130120823	789624	4	144,174,124,118,	0,39535,40644,50812,
#Partially deleted in new
chr11	130069893	130121783	chr11:130069893-130121783	0	+	130069893	130069893	8553170	5	125,53,124,113,170,	0,39656,40644,50812,51720,
#Partially deleted in new
chr11	130069893	130121726	chr11:130069893-130121726	0	+	130069977	130120810	789624	5	189,174,27,53,113,	0,39535,40644,50872,51720,
#Partially deleted in new
chr11	130069905	130144811	chr11:130069905-130144811	1	+	130069977	130143448	0	18	177,174,124,113,197,209,168,131,75,159,129,100,153,36,86,75,156,1465,	0,39523,40632,50800,51708,52399,53706,56794,57860,59142,60132,63723,65657,67350,70492,71592,72013,73441,
#Partially deleted in new
chr11	130069915	130143679	chr11:130069915-130143679	1	+	130069977	130143448	0	13	167,174,124,131,75,159,129,100,153,86,75,156,333,	0,39513,40622,56784,57850,59132,60122,63713,65647,70482,71582,72003,73431,
#Partially deleted in new
chr11	130069920	130144405	chr11:130069920-130144405	1	+	130069977	130143448	0	17	162,174,124,113,197,209,168,131,75,159,129,100,153,86,75,156,1059,	0,39508,40617,50785,51693,52384,53691,56779,57845,59127,60117,63708,65642,70477,71577,71998,73426,
#Partially deleted in new
chr11	130070567	130144804	chr11:130070567-130144804	1	+	130070612	130143448	0	17	180,174,124,113,197,209,168,131,75,159,129,100,153,86,75,156,1458,	0,38861,39970,50138,51046,51737,53044,56132,57198,58480,59470,63061,64995,69830,70930,71351,72779,
#Deleted in new
chr11	130082494	130082781	chr11:130082494-130082781	7	-	130082494	130082494	16724991	1	287,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	130109160	130110573	chr11:130109160-130110573	0	+	130109160	130109160	8553170	2	442,36,	0,1377,
#Partially deleted in new
chr11	130109426	130120817	chr11:130109426-130120817	0	+	130109426	130109426	8553170	3	123,88,112,	0,1147,11279,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	130114250	130114335	chr11:130114250-130114335	3	-	130114250	130114250	8553170	1	85,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	130138777	130143575	chr11:130138777-130143575	0	+	130138777	130138777	8553170	5	878,86,75,156,229,	0,1620,2720,3141,4569,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	130140494	130143434	chr11:130140494-130143434	0	+	130140494	130140494	8553170	3	1078,156,88,	0,1424,2852,
#Partially deleted in new
chr11	130141411	130144273	chr11:130141411-130144273	0	+	130141411	130141411	8553170	2	663,927,	0,1935,
#Partially deleted in new
chr11	130159561	130210376	chr11:130159561-130210376	3	+	130159979	130209823	0	19	499,160,128,71,158,36,241,140,98,110,131,105,111,114,123,187,275,137,715,	0,28552,28968,29307,30177,30551,30892,34587,35078,36777,37008,38279,38746,38946,39385,40389,48848,49880,50100,
#Partially deleted in new
chr11	130189324	130196436	chr11:130189324-130196436	0	+	130189324	130189324	8553170	6	572,36,241,140,98,98,	0,788,1129,4824,5315,7014,
#Partially deleted in new
chr11	130190040	130196794	chr11:130190040-130196794	0	+	130190040	130190040	8553170	6	108,241,140,98,110,225,	0,413,4108,4599,6298,6529,
#Partially deleted in new
chr11	130190222	130196610	chr11:130190222-130196610	0	+	130190222	130190222	8553170	5	472,140,98,110,41,	0,3926,4417,6116,6347,
#Partially deleted in new
chr11	130226676	130314612	chr11:130226676-130314612	0	-	130236163	130261873	789624	11	1680,146,77,75,118,107,84,164,85,1074,238,	0,3152,4962,6631,7479,9433,10333,11767,13135,34179,87698,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	130226676	130314908	chr11:130226676-130314908	3	-	130233990	130261873	789624	6	7597,301,164,85,1074,534,	0,10116,11767,13135,34179,87698,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	130226677	130314686	chr11:130226677-130314686	1	-	130234262	130261873	789624	6	7596,84,164,85,1074,312,	0,10332,11766,13134,34178,87697,
#Partially deleted in new
chr11	130226683	130314612	chr11:130226683-130314612	1	-	130233355	130261873	789624	10	1673,146,77,75,118,301,164,85,1074,238,	0,3145,4955,6624,7472,10109,11760,13128,34172,87691,
#Partially deleted in new
chr11	130230968	130314591	chr11:130230968-130314591	1	-	130233355	130261873	789624	8	747,75,118,301,164,85,1074,217,	0,2339,3187,5824,7475,8843,29887,83406,
#Partially deleted in new
chr11	130230978	130261889	chr11:130230978-130261889	1	-	130233308	130261873	789624	6	737,75,84,164,85,1034,	0,2329,6031,7465,8833,29877,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	130231665	130261434	chr11:130231665-130261434	0	-	130233308	130261434	789624	5	1717,84,164,85,579,	0,5344,6778,8146,29190,
#Deleted in new
chr11	130236630	130238591	chr11:130236630-130238591	0	-	130236630	130236630	8553170	2	463,148,	0,1813,
#Partially deleted in new
chr11	130237009	130261112	chr11:130237009-130261112	0	-	130237009	130261112	789624	4	84,113,85,257,	0,1434,2802,23846,
#Partially deleted in new
chr11	130238814	130261931	chr11:130238814-130261931	0	-	130238814	130238814	8553170	2	1082,1076,	0,22041,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	130285022	130285833	chr11:130285022-130285833	7	-	130285022	130285022	16724991	2	267,243,	0,568,
#Deleted in new
chr11	130295640	130296946	chr11:130295640-130296946	7	+	130295640	130295640	16724991	1	1306,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	130310179	130310476	chr11:130310179-130310476	3	+	130310179	130310179	8553170	1	297,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	130314992	130403017	chr11:130314992-130403017	3	+	130314992	130314992	8553170	6	123,149,102,81,78,1230,	0,53901,78502,78726,86017,86795,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	130315027	130393793	chr11:130315027-130393793	1	+	130315027	130315027	8553170	6	88,148,107,149,102,75,	0,8886,18836,53866,78467,78691,
#Deleted in new
chr11	130315038	130315683	chr11:130315038-130315683	1	+	130315038	130315038	8553170	3	77,120,133,	0,289,512,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	130315058	130403657	chr11:130315058-130403657	0	+	130315058	130315058	8553170	6	57,149,102,81,78,357,	0,53835,78436,78660,85951,88242,
#Deleted in new
chr11	130401901	130403657	chr11:130401901-130403657	0	+	130401901	130401901	8553170	2	56,357,	0,1399,
#Partially deleted in new
chr11	130404924	130428993	chr11:130404924-130428993	3	-	130405557	130428286	789624	9	1204,176,173,184,302,168,136,240,1427,	0,3539,3843,6492,9606,11238,12015,14128,22642,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	130404924	130412113	chr11:130404924-130412113	0	-	130404924	130404924	8553170	4	1204,176,173,697,	0,3539,3843,6492,
#Partially deleted in new
chr11	130448973	130476641	chr11:130448973-130476641	3	+	130448973	130473821	789624	8	957,133,168,284,178,182,176,3595,	0,12515,13113,13523,20288,21946,22234,24073,
#Deleted in new
chr11	130544642	130544856	chr11:130544642-130544856	7	-	130544642	130544642	16724991	1	214,	0,
#Deleted in new
chr11	130546798	130547429	chr11:130546798-130547429	7	-	130546798	130546798	16724991	1	631,	0,
#Partially deleted in new
chr11	130666734	130666803	chr11:130666734-130666803	3	+	130666734	130666734	5263520	1	69,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	130672955	130717352	chr11:130672955-130717352	3	+	130672955	130672955	8553170	3	233,107,3207,	0,40238,41190,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	130789230	130791025	chr11:130789230-130791025	7	-	130789230	130789230	16724991	1	1795,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr11	130844190	130865561	chr11:130844190-130865561	3	-	130844190	130844190	789624	7	846,65,180,166,53,801,92,	0,1936,2672,10536,17585,17775,21279,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	130844752	130847590	chr11:130844752-130847590	0	-	130844752	130844752	8553170	4	284,65,180,52,	0,1374,2110,2786,
#Deleted in new
chr11	130866253	130870247	chr11:130866253-130870247	3	-	130866253	130866253	789624	1	3994,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr11	130875435	130916509	chr11:130875435-130916509	3	-	130878421	130915939	789624	11	3119,88,185,130,181,97,131,120,101,139,2244,	0,4188,5186,27819,30517,31189,32517,34582,34834,36197,38830,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	130877839	130881141	chr11:130877839-130881141	0	-	130877839	130877839	8553170	3	715,88,520,	0,1784,2782,
#Partially deleted in new
chr11	130877912	130905999	chr11:130877912-130905999	0	-	130877912	130877912	8553170	4	642,88,130,47,	0,1711,25342,28040,
#Partially deleted in new
chr11	130877957	130908346	chr11:130877957-130908346	1	-	130878421	130906115	789624	7	597,88,185,130,181,97,378,	0,1666,2664,25297,27995,28667,30011,
#Partially deleted in new
chr11	130878050	130893874	chr11:130878050-130893874	1	-	130878421	130893840	789624	4	504,88,185,111,	0,1573,2571,15713,
#Partially deleted in new
chr11	130878195	130916444	chr11:130878195-130916444	0	-	130878195	130878195	8553170	10	359,88,185,130,181,97,120,101,139,165,	0,1428,2426,25059,27757,28429,31822,32074,33437,38084,
#Partially deleted in new
chr11	130878256	130893059	chr11:130878256-130893059	0	-	130878256	130878256	8553170	4	298,88,185,309,	0,1367,2365,14494,
#Partially deleted in new
chr11	130878392	130916451	chr11:130878392-130916451	1	-	130878421	130910323	789624	11	162,88,185,130,181,97,131,120,101,139,172,	0,1231,2229,24862,27560,28232,29560,31625,31877,33240,37887,
#Partially deleted in new
chr11	130878392	130916451	chr11:130878392-130916451	1	-	130878421	130910323	789624	12	162,88,185,130,181,97,131,120,101,139,56,172,	0,1231,2229,24862,27560,28232,29560,31625,31877,33240,36301,37887,
#Partially deleted in new
chr11	130901810	130910371	chr11:130901810-130910371	0	-	130901810	130901810	8553170	7	35,130,181,97,131,120,102,	0,1444,4142,4814,6142,8207,8459,
#Deleted in new
chr11	130903068	130906134	chr11:130903068-130906134	0	-	130903068	130903068	8553170	2	316,182,	0,2884,
#Partially deleted in new
chr11	130905654	130916449	chr11:130905654-130916449	1	-	130905828	130915939	789624	8	194,130,97,131,120,101,139,2184,	0,298,970,2298,4363,4615,5978,8611,
#Partially deleted in new
chr11	130910307	130916479	chr11:130910307-130916479	0	-	130910307	130910307	8553170	3	63,321,200,	0,1143,5972,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	131004127	131004429	chr11:131004127-131004429	3	-	131004127	131004127	8553170	1	302,	0,
#Partially deleted in new
chr11	131187021	131189753	chr11:131187021-131189753	3	+	131187021	131187021	8553170	2	106,529,	0,2203,
#Partially deleted in new
chr11	131204998	131215163	chr11:131204998-131215163	3	+	131204998	131204998	8553170	2	239,323,	0,9842,
#Partially deleted in new
chr11	131234537	131251816	chr11:131234537-131251816	3	+	131234537	131234537	8553170	2	116,453,	0,16826,
#Partially deleted in new
chr11	131253421	131300771	chr11:131253421-131300771	1	+	131253421	131253421	8553170	2	170,414,	0,46936,
#Partially deleted in new
chr11	131253445	131350917	chr11:131253445-131350917	3	+	131253445	131253445	8553170	2	146,609,	0,96863,
#Partially deleted in new
chr11	131370477	132336822	chr11:131370477-132336822	1	+	131370806	132335146	789624	8	411,85,233,126,135,121,152,1777,	0,541086,775804,841544,937211,939634,944074,964568,
#Partially deleted in new
chr11	131370625	131911616	chr11:131370625-131911616	0	+	131660993	131911616	789624	3	263,120,53,	0,290303,540938,
#Partially deleted in new
chr11	131370628	131661231	chr11:131370628-131661231	0	+	131370628	131370628	8553170	2	260,303,	0,290300,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	131385248	131385363	chr11:131385248-131385363	3	+	131385248	131385248	8553170	1	115,	0,
#Partially deleted in new
chr11	131455462	132307763	chr11:131455462-132307763	0	+	131660993	132307763	789624	6	5,120,85,233,126,75,	0,205466,456101,690819,756559,852226,
#Partially deleted in new
chr11	131502758	131540616	chr11:131502758-131540616	0	-	131502758	131502758	8553170	3	206,129,97,	0,34284,37761,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr11	131533856	131540867	chr11:131533856-131540867	3	-	131533856	131533856	789624	8	2303,210,101,1239,185,66,180,51,	0,2765,3214,3547,5235,5686,6663,6960,
#Partially deleted in new
chr11	131536475	131540598	chr11:131536475-131540598	0	-	131536475	131536475	8553170	3	356,101,79,	0,595,4044,
#Partially deleted in new
chr11	131546661	131573600	chr11:131546661-131573600	0	-	131546661	131546661	8553170	2	94,55,	0,26884,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	131564543	131581145	chr11:131564543-131581145	3	-	131564543	131564543	8553170	4	2063,92,53,482,	0,9002,10611,16120,
#Partially deleted in new
chr11	131582010	131661048	chr11:131582010-131661048	0	+	131660993	131661048	789624	2	368,120,	0,78918,
#Deleted in new
chr11	131662130	131663583	chr11:131662130-131663583	3	-	131662130	131662130	789624	2	285,418,	0,1035,
#Deleted in new
chr11	131770794	131771638	chr11:131770794-131771638	7	-	131770794	131770794	16724991	1	844,	0,
#Partially deleted in new
chr11	131877679	131897108	chr11:131877679-131897108	3	-	131877679	131877679	8553170	2	425,84,	0,19345,
#Partially deleted in new
chr11	131909696	131922263	chr11:131909696-131922263	0	+	131909696	131909696	8553170	3	290,85,181,	0,1867,12386,
#Partially deleted in new
chr11	131910043	132314599	chr11:131910043-132314599	0	+	131910043	131910043	8553170	6	58,85,126,135,121,48,	0,1520,301978,397645,400068,404508,
#Deleted in new
chr11	131910818	131911648	chr11:131910818-131911648	0	+	131910818	131910818	8553170	2	275,85,	0,745,
#Partially deleted in new
chr11	131911002	132336822	chr11:131911002-132336822	3	+	131911481	132335146	789624	7	646,233,126,135,121,152,1777,	0,235279,301019,396686,399109,403549,424043,
#Partially deleted in new
chr11	131911440	132146924	chr11:131911440-132146924	0	+	131911440	131911440	8553170	2	208,643,	0,234841,
#Partially deleted in new
chr11	131911461	132335665	chr11:131911461-132335665	1	+	131911481	132335146	789624	8	187,233,126,135,121,152,33,620,	0,234820,300560,396227,398650,403090,418691,423584,
#Partially deleted in new
chr11	131911467	132315070	chr11:131911467-132315070	1	+	131911481	132314720	789624	6	181,233,126,135,121,519,	0,234814,300554,396221,398644,403084,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	131981095	131984661	chr11:131981095-131984661	3	-	131981095	131981095	8553170	2	398,179,	0,3387,
#Partially deleted in new
chr11	132141010	132314703	chr11:132141010-132314703	0	+	132141010	132141010	8553170	6	60,233,126,135,121,152,	0,5271,71011,166678,169101,173541,
#Partially deleted in new
chr11	132146274	132336821	chr11:132146274-132336821	1	+	132307690	132335146	789624	7	240,126,135,121,152,33,1776,	0,65747,161414,163837,168277,183878,188771,
#Partially deleted in new
chr11	132146274	132336821	chr11:132146274-132336821	1	+	132307690	132335146	789624	6	240,126,135,121,152,1776,	0,65747,161414,163837,168277,188771,
#Partially deleted in new
chr11	132211739	132335051	chr11:132211739-132335051	0	+	132211739	132211739	8553170	6	120,126,135,121,152,6,	0,282,95949,98372,102812,123306,
#Partially deleted in new
chr11	132211756	132336802	chr11:132211756-132336802	0	+	132211756	132211756	8553170	7	103,126,135,121,118,152,1757,	0,265,95932,98355,100908,102795,123289,
#Partially deleted in new
chr11	132211798	132307762	chr11:132211798-132307762	0	+	132211798	132211798	8553170	4	61,126,174,74,	0,223,94496,95890,
#Partially deleted in new
chr11	132211798	132312514	chr11:132211798-132312514	0	+	132211798	132211798	8553170	5	61,126,135,121,121,	0,223,95890,98313,100595,
#Partially deleted in new
chr11	132310195	132335451	chr11:132310195-132335451	0	+	132310195	132335146	789624	5	37,152,36,33,406,	0,4356,7459,19957,24850,
#Deleted in new
chr11	132332243	132335653	chr11:132332243-132335653	0	+	132332243	132332243	8553170	3	284,102,298,	0,2802,3112,
#Deleted in new
chr11	132332489	132335286	chr11:132332489-132335286	0	+	132332489	132332489	8553170	2	274,241,	0,2556,
#Deleted in new
chr11	132403359	132404060	chr11:132403359-132404060	3	-	132403359	132403359	8553170	1	701,	0,
#Partially deleted in new
chr11	132414976	132943671	chr11:132414976-132943671	3	-	132420192	132943092	0	7	5317,152,121,138,126,233,746,	0,21109,21682,22245,114084,242110,527949,
#Partially deleted in new
chr11	132414980	133532519	chr11:132414980-133532519	1	-	132420192	133532324	0	8	5313,152,121,138,126,233,85,256,	0,21105,21678,22241,114080,242106,527945,1117283,
#Partially deleted in new
chr11	132414980	132943092	chr11:132414980-132943092	1	-	132420192	132943092	0	9	5313,27,152,121,138,126,233,5,162,	0,20178,21105,21678,22241,114080,242106,395812,527950,
#Partially deleted in new
chr11	132414980	132943092	chr11:132414980-132943092	1	-	132420192	132943092	0	8	5313,152,121,138,126,233,5,162,	0,21105,21678,22241,114080,242106,395812,527950,
#Partially deleted in new
chr11	132419859	133532402	chr11:132419859-133532402	0	-	132419859	132419859	8553170	7	434,152,121,138,126,233,139,	0,16226,16799,17362,109201,237227,1112404,
#Partially deleted in new
chr11	132420019	132943768	chr11:132420019-132943768	1	-	132420192	132942969	0	8	274,152,121,138,126,233,85,173,	0,16066,16639,17202,109041,237067,522906,523576,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	132525808	132525887	chr11:132525808-132525887	3	+	132525808	132525808	8553170	1	79,	0,
#Partially deleted in new
chr11	132657086	132943010	chr11:132657086-132943010	0	-	132657086	132657086	8553170	2	233,85,	0,285839,
#Deleted in new
chr11	132771622	132773371	chr11:132771622-132773371	3	-	132771622	132771622	8553170	1	1749,	0,
#Partially deleted in new
chr11	132817125	132860777	chr11:132817125-132860777	0	-	132817125	132817125	8553170	2	66,299,	0,43353,
#Partially deleted in new
chr11	132859244	132860077	chr11:132859244-132860077	3	-	132859244	132859244	8553170	2	332,66,	0,767,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	133064696	133068129	chr11:133064696-133068129	3	+	133064696	133064696	8553170	1	3433,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	133297188	133302634	chr11:133297188-133302634	3	-	133297188	133297188	8553170	1	5446,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	133360028	133366080	chr11:133360028-133366080	3	-	133360028	133360028	8553170	2	2164,772,	0,5280,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	133783670	133810376	chr11:133783670-133810376	3	-	133783670	133783670	789624	3	854,93,28,	0,26406,26678,
#Deleted in new
chr11	133840630	133845501	chr11:133840630-133845501	3	-	133842038	133845446	789624	7	293,76,78,92,132,57,133,	0,1399,1854,3615,3878,4503,4738,
#Deleted in new
chr11	133840761	133845538	chr11:133840761-133845538	1	-	133842038	133845446	789624	7	48,76,78,92,132,57,170,	0,1268,1723,3484,3747,4372,4607,
#Partially deleted in new
chr11	133864876	133865627	chr11:133864876-133865627	7	-	133864876	133864876	16724991	1	751,	0,
#Deleted in new
chr11	133896437	133901601	chr11:133896437-133901601	3	-	133896437	133896437	789624	1	5164,	0,
#Deleted in new
chr11	133898503	133898581	chr11:133898503-133898581	3	-	133898503	133898503	5263520	1	78,	0,
#Partially deleted in new
chr11	133908563	133956985	chr11:133908563-133956985	3	-	133909068	133956754	789624	20	714,122,1656,46,162,85,227,176,112,151,117,141,143,146,142,118,152,147,198,295,	0,3322,11178,13613,14005,16256,17175,18352,21107,22420,22889,23091,23507,27053,27489,28812,29246,35656,37497,48127,
#Deleted in new
chr11	133908563	133912362	chr11:133908563-133912362	0	-	133908563	133908563	8553170	3	714,122,68,	0,3322,3731,
#Deleted in new
chr11	133909182	133912118	chr11:133909182-133912118	0	-	133909182	133909182	8553170	2	95,233,	0,2703,
#Partially deleted in new
chr11	133919038	133956754	chr11:133919038-133956754	1	-	133919038	133956754	789624	19	67,1656,46,162,85,227,176,112,151,117,141,143,146,142,118,152,147,198,64,	0,703,3138,3530,5781,6700,7877,10632,11945,12414,12616,13032,16578,17014,18337,18771,25181,27022,37652,
#Partially deleted in new
chr11	133922575	133938100	chr11:133922575-133938100	0	-	133922575	133922575	8553170	13	155,85,227,176,112,151,117,141,143,146,142,118,291,	0,2244,3163,4340,7095,8408,8877,9079,9495,13041,13477,14800,15234,
#Deleted in new
chr11	133937406	133946292	chr11:133937406-133946292	0	-	133937406	133946292	789624	4	87,152,147,232,	0,403,6813,8654,
#Deleted in new
chr11	133944283	133952216	chr11:133944283-133952216	0	-	133944283	133952137	789624	3	83,198,284,	0,1777,7649,
#Deleted in new
chr11	134026899	134030167	chr11:134026899-134030167	3	+	134026899	134026899	8553170	3	135,451,330,	0,783,2938,
#Deleted in new
chr11	134026986	134028118	chr11:134026986-134028118	0	+	134026986	134026986	8553170	2	80,436,	0,696,
#Partially deleted in new
chr11	134032271	134041248	chr11:134032271-134041248	0	+	134032271	134032271	5263520	3	589,130,1487,	0,5240,7490,
#Partially deleted in new
chr11	134032386	134039830	chr11:134032386-134039830	1	+	134032386	134032386	8553170	2	474,69,	0,7375,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	134032651	134038975	chr11:134032651-134038975	1	+	134032651	134032651	8553170	2	209,1464,	0,4860,
#Partially deleted in new
chr11	134032795	134040267	chr11:134032795-134040267	1	+	134032795	134032795	8553170	2	65,506,	0,6966,
#Partially deleted in new
chr11	134032804	134046849	chr11:134032804-134046849	3	+	134032804	134032804	8553170	4	56,130,319,89,	0,4707,6957,13956,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	134035831	134037107	chr11:134035831-134037107	3	-	134035831	134035831	8553170	2	919,211,	0,1065,
#Partially deleted in new
chr11	134037108	134039939	chr11:134037108-134039939	1	+	134037108	134037108	8553170	2	533,178,	0,2653,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	134038642	134041248	chr11:134038642-134041248	0	+	134038642	134038642	8553170	2	274,1487,	0,1119,
#Partially deleted in new
chr11	134068924	134152001	chr11:134068924-134152001	3	+	134069083	134149181	789624	9	235,66,114,153,203,100,130,55,2856,	0,70926,71732,75316,75867,77021,79622,79839,80221,
#Partially deleted in new
chr11	134069070	134151751	chr11:134069070-134151751	1	+	134069083	134149181	789624	8	89,66,114,203,100,130,55,2606,	0,70780,71586,75721,76875,79476,79693,80075,
#Partially deleted in new
chr11	134069070	134144826	chr11:134069070-134144826	0	+	134069083	134070212	789624	6	89,107,66,114,153,35,	0,1101,70780,71586,75170,75721,
#Partially deleted in new
chr11	134069070	134144934	chr11:134069070-134144934	0	+	134069083	134144934	789624	3	89,153,143,	0,75170,75721,
#Partially deleted in new
chr11	134069084	134145431	chr11:134069084-134145431	0	+	134069084	134069084	8553170	5	75,66,114,153,640,	0,70766,71572,75156,75707,
#Deleted in new
chr11	134123827	134124329	chr11:134123827-134124329	7	-	134123827	134123827	16724991	1	502,	0,
#Partially deleted in new
chr11	134126338	134144996	chr11:134126338-134144996	0	+	134126338	134126338	8553170	5	140,66,114,153,205,	0,13512,14318,17902,18453,
#Partially deleted in new
chr11	134139639	134145012	chr11:134139639-134145012	0	+	134139639	134139639	8553170	5	106,66,114,153,221,	0,211,1017,4601,5152,
#Deleted in new
chr11	134147797	134149208	chr11:134147797-134149208	0	+	134147797	134147797	8553170	3	879,55,63,	0,966,1348,
#Deleted in new
chr11	134150118	134154049	chr11:134150118-134154049	0	-	134150118	134150118	8553170	2	465,761,	0,3170,
#Partially deleted in new
chr11	134152433	134224532	chr11:134152433-134224532	0	-	134168512	134223926	789624	35	619,61,75,78,140,167,183,111,200,60,138,80,239,108,115,108,116,98,192,221,135,74,90,57,253,126,73,134,88,62,165,185,163,155,670,	0,706,855,4584,5494,5895,7458,9347,15562,16035,16483,23873,24785,26200,26388,28643,32203,32469,32901,40255,41582,42231,50382,50708,51220,51612,52465,54165,56430,56711,56879,57836,64502,68138,71429,
#Partially deleted in new
chr11	134152444	134223991	chr11:134152444-134223991	3	-	134152943	134223926	789624	35	608,61,75,78,140,167,183,111,200,134,138,80,239,108,115,108,116,98,192,221,135,74,90,57,253,126,73,134,88,62,165,185,163,155,129,	0,695,844,4573,5483,5884,7447,9336,15551,16024,16472,23862,24774,26189,26377,28632,32192,32458,32890,40244,41571,42220,50371,50697,51209,51601,52454,54154,56419,56700,56868,57825,64491,68127,71418,
#Partially deleted in new
chr11	134152846	134224216	chr11:134152846-134224216	0	-	134183105	134223926	789624	36	206,61,75,78,140,167,183,111,200,134,138,80,239,108,115,108,141,116,98,192,221,135,74,90,57,253,126,73,134,88,62,165,185,163,155,354,	0,293,442,4171,5081,5482,7045,8934,15149,15622,16070,23460,24372,25787,25975,28230,30166,31790,32056,32488,39842,41169,41818,49969,50295,50807,51199,52052,53752,56017,56298,56466,57423,64089,67725,71016,
#Deleted in new
chr11	134156874	134158049	chr11:134156874-134158049	0	-	134156874	134156874	8553170	2	221,122,	0,1053,
#Partially deleted in new
chr11	134159889	134168472	chr11:134159889-134168472	0	-	134159889	134168283	789624	3	185,111,477,	0,1891,8106,
#Partially deleted in new
chr11	134161779	134178075	chr11:134161779-134178075	0	-	134161779	134177347	789624	6	112,200,134,138,80,857,	0,6216,6689,7137,14527,15439,
#Deleted in new
chr11	134173094	134173680	chr11:134173094-134173680	7	+	134173094	134173094	16724991	1	586,	0,
#Deleted in new
chr11	134178482	134178914	chr11:134178482-134178914	0	-	134178482	134178482	8553170	2	259,93,	0,339,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	134178823	134186166	chr11:134178823-134186166	3	+	134178823	134178823	8553170	2	96,238,	0,7105,
#Partially deleted in new
chr11	134208870	134223941	chr11:134208870-134223941	0	-	134210445	134223926	789624	6	81,62,165,185,155,79,	0,274,442,1399,11701,14992,
#Deleted in new
chr11	134208878	134209734	chr11:134208878-134209734	0	-	134208878	134208878	8553170	3	73,62,422,	0,266,434,
#Partially deleted in new
chr11	134220568	134224545	chr11:134220568-134224545	0	-	134220568	134223926	789624	3	158,138,259,	0,3294,3718,
#Partially deleted in new
chr11	134220685	134225454	chr11:134220685-134225454	0	-	134220685	134223926	789624	3	41,138,358,	0,3177,4411,
#Deleted in new
chr11	134223092	134224532	chr11:134223092-134224532	1	-	134223432	134223926	789624	2	390,670,	0,770,
#Deleted in new
chr11	134223446	134225454	chr11:134223446-134225454	0	-	134223446	134223926	789624	3	36,138,358,	0,416,1650,
#Partially deleted in new
chr11	134224644	134247792	chr11:134224644-134247792	3	+	134225122	134245590	789624	6	701,157,165,176,143,2349,	0,10252,15346,18474,20293,20799,
#Partially deleted in new
chr11	134224676	134245729	chr11:134224676-134245729	1	+	134225122	134245590	789624	7	85,546,157,165,176,143,286,	0,123,10220,15314,18442,20261,20767,
#Partially deleted in new
chr11	134225193	134243733	chr11:134225193-134243733	0	+	134225193	134240055	789624	4	152,165,176,307,	0,14797,17925,18233,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	134225298	134235707	chr11:134225298-134235707	0	+	134225298	134225298	8553170	2	47,811,	0,9598,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	134234961	134243196	chr11:134234961-134243196	0	+	134234961	134236396	789624	4	92,405,165,78,	0,1380,5029,8157,
#Partially deleted in new
chr11	134239650	134243234	chr11:134239650-134243234	0	+	134239650	134239650	8553170	2	505,116,	0,3468,
#Deleted in new
chr11	134243851	134246287	chr11:134243851-134246287	0	+	134243851	134243851	8553170	2	1229,844,	0,1592,
#Partially deleted in new
chr11	134248278	134253344	chr11:134248278-134253344	1	-	134248437	134252882	0	7	206,151,96,93,69,179,505,	0,530,888,1549,1996,2851,4561,
#Partially deleted in new
chr11	134248278	134253370	chr11:134248278-134253370	3	-	134248437	134252882	0	8	206,151,96,93,69,179,77,72,	0,530,888,1549,1996,2851,4561,5020,
#Partially deleted in new
chr11	134248278	134253248	chr11:134248278-134253248	1	-	134248437	134252882	0	8	206,151,96,93,69,179,77,22,	0,530,888,1549,1996,2851,4561,4948,
#Partially deleted in new
chr11	134248287	134253350	chr11:134248287-134253350	1	-	134248463	134252882	0	7	197,96,93,69,179,77,124,	0,879,1540,1987,2842,4552,4939,
#Partially deleted in new
chr11	134248881	134253353	chr11:134248881-134253353	0	-	134248881	134248881	8553170	6	381,93,69,179,77,127,	0,946,1393,2248,3958,4345,
#Partially deleted in new
chr11	134249038	134253348	chr11:134249038-134253348	0	-	134249038	134249038	8553170	5	224,93,69,179,509,	0,789,1236,2091,3801,
#Partially deleted in new
chr11	134249888	134251778	chr11:134249888-134251778	0	-	134249888	134249888	8553170	3	32,64,649,	0,386,1241,
#Deleted in new
chr11	134251230	134253301	chr11:134251230-134253301	0	-	134251230	134251230	8553170	4	78,147,77,75,	0,518,1609,1996,
#Partially deleted in new
chr11	134253494	134265855	chr11:134253494-134265855	3	+	134253600	134264960	0	11	215,101,170,110,77,138,136,98,153,103,948,	0,3053,3593,5020,5513,6113,7549,7780,8243,9025,11413,
#Partially deleted in new
chr11	134253547	134262958	chr11:134253547-134262958	0	+	134253600	134257188	789624	10	162,170,110,77,138,136,98,153,103,189,	0,3540,4967,5460,6060,7496,7727,8190,8972,9222,
#Partially deleted in new
chr11	134253557	134262612	chr11:134253557-134262612	0	+	134253600	134258535	789624	9	152,101,110,77,138,136,98,284,93,	0,2990,4957,5450,6050,7486,7717,8049,8962,
#Partially deleted in new
chr11	134253558	134260140	chr11:134253558-134260140	0	+	134253558	134253558	8553170	5	151,101,170,77,533,	0,2989,3529,5449,6049,
#Partially deleted in new
chr11	134253560	134265850	chr11:134253560-134265850	1	+	134253600	134264960	0	8	149,77,138,136,98,153,103,943,	0,5447,6047,7483,7714,8177,8959,11347,
#Partially deleted in new
chr11	134253563	134256910	chr11:134253563-134256910	0	+	134253563	134253563	8553170	2	146,363,	0,2984,
#Partially deleted in new
chr11	134253567	134260614	chr11:134253567-134260614	0	+	134253567	134253567	8553170	5	142,101,110,77,1007,	0,2980,4947,5440,6040,
#Partially deleted in new
chr11	134253568	134265850	chr11:134253568-134265850	0	+	134253568	134253568	8553170	8	141,110,77,1572,98,153,103,943,	0,4946,5439,6039,7706,8169,8951,11339,
#Partially deleted in new
chr11	134253568	134259845	chr11:134253568-134259845	0	+	134253568	134253568	8553170	4	141,110,77,238,	0,4946,5439,6039,
#Partially deleted in new
chr11	134253576	134259925	chr11:134253576-134259925	0	+	134253576	134253576	8553170	4	133,101,110,918,	0,2971,4938,5431,
#Partially deleted in new
chr11	134253616	134262527	chr11:134253616-134262527	0	+	134253616	134253616	8553170	7	93,77,138,136,98,153,8,	0,5391,5991,7427,7658,8121,8903,
#Partially deleted in new
chr11	134256582	134265850	chr11:134256582-134265850	0	+	134256582	134256582	8553170	10	66,170,110,77,138,136,98,153,1424,943,	0,505,1932,2425,3025,4461,4692,5155,5549,8325,
#Partially deleted in new
chr11	134256609	134260282	chr11:134256609-134260282	0	+	134256609	134256609	8553170	5	39,170,110,77,675,	0,478,1905,2398,2998,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	134257746	134261885	chr11:134257746-134261885	0	+	134257746	134257746	8553170	6	878,77,138,136,98,148,	0,1261,1861,3297,3528,3991,
#Deleted in new
chr11	134258891	134261179	chr11:134258891-134261179	0	+	134258891	134258891	8553170	3	193,138,136,	0,716,2152,
#Deleted in new
chr11	134259237	134260552	chr11:134259237-134260552	0	+	134259237	134259237	8553170	2	508,524,	0,791,
#Deleted in new
chr11	134262184	134264061	chr11:134262184-134264061	0	+	134262184	134262184	8553170	3	92,103,1292,	0,335,585,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	134274244	134305308	chr11:134274244-134305308	1	+	134276740	134305180	789624	10	2519,126,213,69,96,109,93,82,65,194,	0,3081,3455,7132,7780,9492,14553,17887,18900,30870,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr11	134276740	134319563	chr11:134276740-134319563	3	+	134276740	134318942	789624	20	23,126,213,69,96,109,93,82,65,85,138,81,107,141,72,79,88,112,117,687,	0,585,959,4636,5284,6996,12057,15391,16404,30383,32885,33830,34323,35608,36075,36655,37200,37589,41890,42136,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	134287101	134289001	chr11:134287101-134289001	0	+	134287101	134287101	8553170	2	226,204,	0,1696,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr11	134287116	134319558	chr11:134287116-134319558	0	+	134287116	134287116	8553170	12	211,93,82,65,85,1545,141,72,88,112,117,682,	0,1681,5015,6028,20007,22509,25232,25699,26824,27213,31514,31760,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr11	134287139	134319564	chr11:134287139-134319564	0	+	134287139	134287139	8553170	9	188,93,1078,141,72,88,112,117,688,	0,1658,4992,25209,25676,26801,27190,31491,31737,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr11	134307191	134319284	chr11:134307191-134319284	0	+	134307191	134313946	789624	10	17,136,81,107,141,72,88,112,117,408,	0,2436,3379,3872,5157,5624,6749,7138,11439,11685,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	134309703	134314447	chr11:134309703-134314447	0	+	134309703	134309703	8553170	6	1467,141,72,79,88,118,	0,2645,3112,3692,4237,4626,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	134309703	134319563	chr11:134309703-134319563	0	+	134309703	134309703	8553170	6	2786,72,88,112,117,687,	0,3112,4237,4626,8927,9173,
#Deleted in new
chr11	134316781	134317088	chr11:134316781-134317088	7	-	134316781	134316781	16724991	1	307,	0,
#Partially deleted in new
chr11	134331873	134376321	chr11:134331873-134376321	1	+	134332061	134375058	789624	20	274,198,69,96,109,93,82,71,85,138,81,107,141,72,79,88,112,117,913,227,	0,10880,12513,13160,15451,24427,27186,32454,35383,36770,37931,38419,39134,39547,39878,41847,42271,42728,43098,44221,
#Partially deleted in new
chr11	134331873	134376324	chr11:134331873-134376324	3	+	134332061	134375058	789624	19	274,198,69,96,109,93,82,71,85,138,81,107,141,72,79,88,112,117,1353,	0,10880,12513,13160,15451,24427,27186,32454,35383,36770,37931,38419,39134,39547,39878,41847,42271,42728,43098,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr11	134346389	134378341	chr11:134346389-134378341	0	+	134346389	134346389	8553170	22	753,109,93,82,482,1289,71,85,85,138,81,107,141,72,79,169,88,112,117,1053,137,278,	0,935,9911,12670,13150,13864,17938,20665,20867,22254,23415,23903,24618,25031,25362,26040,27331,27755,28212,28582,30728,31674,
#Partially deleted in new
chr11	134347335	134365080	chr11:134347335-134365080	0	+	134347335	134347335	8553170	4	98,93,82,753,	0,8965,11724,16992,
#Partially deleted in new
chr11	134356014	134369877	chr11:134356014-134369877	0	+	134356014	134356014	8553170	7	40,93,82,71,85,138,73,	0,286,3045,8313,11242,12629,13790,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	134378503	134387197	chr11:134378503-134387197	0	-	134378503	134378503	8553170	4	2244,101,297,3518,	0,3420,4206,5176,
#Partially deleted in new
chr11	134378505	134411918	chr11:134378505-134411918	3	-	134381937	134387659	0	7	2242,101,297,509,147,114,112,	0,3418,4204,5174,9042,9321,33301,
#Partially deleted in new
chr11	134378507	134411918	chr11:134378507-134411918	1	-	134381937	134387659	0	6	2240,101,297,509,393,112,	0,3416,4202,5172,9040,33299,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	134381644	134392353	chr11:134381644-134392353	1	-	134381937	134387659	0	6	173,101,297,509,147,4510,	0,279,1065,2035,5903,6199,
#Partially deleted in new
chr11	134383998	134409881	chr11:134383998-134409881	0	-	134383998	134383998	8553170	3	190,393,174,	0,3549,25709,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	134436472	134467275	chr11:134436472-134467275	1	+	134436472	134436472	8553170	2	312,1090,	0,29713,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr11	134436734	134505040	chr11:134436734-134505040	3	+	134436734	134436734	5263520	6	50,1276,123,67,104,243,	0,29605,31130,44110,45892,68063,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	134466184	134487915	chr11:134466184-134487915	1	+	134466184	134466184	8553170	5	1431,123,67,104,1954,	0,1680,14660,16442,19777,
#Partially deleted in new
chr11	134479298	134505661	chr11:134479298-134505661	0	+	134479298	134479298	8553170	3	1613,104,2718,	0,3328,23645,
#Partially deleted in new
chr11	134563395	134573056	chr11:134563395-134573056	3	+	134563395	134563395	8553170	3	39,97,378,	0,2823,9283,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	134671425	134672024	chr11:134671425-134672024	3	-	134671425	134671425	8553170	2	331,58,	0,541,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr11	134685043	134702004	chr11:134685043-134702004	3	-	134685043	134685043	8553170	5	1343,94,136,92,594,	0,11050,13966,15556,16367,
#Deleted in new
chr11	134714541	134715922	chr11:134714541-134715922	3	+	134714541	134714541	8553170	2	239,216,	0,1165,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	134735595	134763810	chr11:134735595-134763810	3	+	134735595	134735595	789624	2	947,2737,	0,25478,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr11	134950707	134951568	chr11:134950707-134951568	3	+	134950707	134950707	8553170	2	590,172,	0,689,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr11	134985682	134986799	chr11:134985682-134986799	3	+	134985682	134985682	789624	1	1117,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr11	134994981	135007779	chr11:134994981-135007779	3	-	134994981	134994981	8553170	4	523,1251,142,267,	0,856,8739,12531,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr11	135061780	135075899	chr11:135061780-135075899	3	-	135061780	135061780	8553170	3	167,258,289,	0,12333,13830,
#Deleted in new
chr11_JH159136v1_alt	15873	16374	chr11_JH159136v1_alt:15873-16374	7	-	15873	15873	16724991	1	501,	0,
#Deleted in new
chr11_JH159136v1_alt	21621	22569	chr11_JH159136v1_alt:21621-22569	3	-	21621	22569	8553170	1	948,	0,
#Deleted in new
chr11_JH159136v1_alt	42854	43934	chr11_JH159136v1_alt:42854-43934	3	-	42854	43934	789624	1	1080,	0,
#Deleted in new
chr11_JH159136v1_alt	62948	63971	chr11_JH159136v1_alt:62948-63971	3	+	62948	63971	789624	1	1023,	0,
#Deleted in new
chr11_JH159136v1_alt	86387	87368	chr11_JH159136v1_alt:86387-87368	3	+	86387	87368	789624	1	981,	0,
#Deleted in new
chr11_JH159136v1_alt	100801	101839	chr11_JH159136v1_alt:100801-101839	3	-	100875	101811	789624	1	1038,	0,
#Deleted in new
chr11_JH159136v1_alt	100803	101799	chr11_JH159136v1_alt:100803-101799	1	-	100803	101799	8553170	2	20,907,	0,89,
#Deleted in new
chr11_JH159136v1_alt	107289	108220	chr11_JH159136v1_alt:107289-108220	7	-	107289	107289	16724991	1	931,	0,
#Deleted in new
chr11_JH159136v1_alt	129055	129994	chr11_JH159136v1_alt:129055-129994	3	+	129055	129994	789624	1	939,	0,
#Deleted in new
chr11_JH159136v1_alt	142095	143237	chr11_JH159136v1_alt:142095-143237	7	-	142095	142095	16724991	1	1142,	0,
#Deleted in new
chr11_JH159136v1_alt	145890	146817	chr11_JH159136v1_alt:145890-146817	7	+	145890	145890	16724991	1	927,	0,
#Deleted in new
chr11_JH159136v1_alt	156787	157747	chr11_JH159136v1_alt:156787-157747	3	+	156787	157747	789624	1	960,	0,
#Deleted in new
chr11_JH159136v1_alt	168076	168970	chr11_JH159136v1_alt:168076-168970	7	+	168076	168076	16724991	1	894,	0,
#Deleted in new
chr11_JH159136v1_alt	170963	172037	chr11_JH159136v1_alt:170963-172037	3	+	170995	171946	789624	1	1074,	0,
#Deleted in new
chr11_JH159136v1_alt	186373	187333	chr11_JH159136v1_alt:186373-187333	3	+	186373	187333	789624	1	960,	0,
#Deleted in new
chr11_JH159136v1_alt	193978	194908	chr11_JH159136v1_alt:193978-194908	3	+	193978	194908	789624	1	930,	0,
#Deleted in new
chr11_JH159136v1_alt	199989	200944	chr11_JH159136v1_alt:199989-200944	7	+	199989	199989	16724991	1	955,	0,
#Deleted in new
chr11_JH159137v1_alt	7153	8071	chr11_JH159137v1_alt:7153-8071	3	+	7153	8071	5263520	1	918,	0,
#Deleted in new
chr11_JH159137v1_alt	18233	19151	chr11_JH159137v1_alt:18233-19151	3	+	18233	19151	789624	1	918,	0,
#Deleted in new
chr11_JH159137v1_alt	54157	54304	chr11_JH159137v1_alt:54157-54304	7	-	54157	54157	16724991	1	147,	0,
#Deleted in new
chr11_JH159137v1_alt	58020	58938	chr11_JH159137v1_alt:58020-58938	7	+	58020	58020	16724991	1	918,	0,
#Deleted in new
chr11_JH159137v1_alt	60668	61653	chr11_JH159137v1_alt:60668-61653	3	-	60669	61653	789624	1	985,	0,
#Deleted in new
chr11_JH159137v1_alt	68864	69744	chr11_JH159137v1_alt:68864-69744	7	-	68864	68864	16724991	1	880,	0,
#Deleted in new
chr11_JH159137v1_alt	93102	94048	chr11_JH159137v1_alt:93102-94048	7	-	93102	93102	16724991	1	946,	0,
#Deleted in new
chr11_JH159137v1_alt	108047	108807	chr11_JH159137v1_alt:108047-108807	7	-	108047	108047	16724991	1	760,	0,
#Deleted in new
chr11_JH159137v1_alt	119697	120636	chr11_JH159137v1_alt:119697-120636	5	-	119697	119697	16724991	1	939,	0,
#Deleted in new
chr11_JH159137v1_alt	119917	137489	chr11_JH159137v1_alt:119917-137489	4	-	119917	119917	16724991	2	96,67,	0,17505,
#Deleted in new
chr11_JH159137v1_alt	119925	137550	chr11_JH159137v1_alt:119925-137550	4	-	119925	119925	16724991	3	299,284,128,	0,441,17497,
#Deleted in new
chr11_JH159137v1_alt	119925	138264	chr11_JH159137v1_alt:119925-138264	7	-	119925	119925	16724991	2	299,322,	0,18017,
#Deleted in new
chr11_JH159137v1_alt	137422	138358	chr11_JH159137v1_alt:137422-138358	3	-	137422	138358	8553170	1	936,	0,
#Deleted in new
chr11_JH159137v1_alt	166409	189093	chr11_JH159137v1_alt:166409-189093	3	+	166409	166409	8553170	2	48,161,	0,22523,
#Deleted in new
chr11_KI270721v1_random	2584	11802	chr11_KI270721v1_random:2584-11802	3	+	2675	11615	8553170	5	108,123,83,74,352,	0,3509,4737,5392,8866,
#Deleted in new
chr11_KI270721v1_random	51721	51792	chr11_KI270721v1_random:51721-51792	3	+	51721	51721	8553170	1	71,	0,
#Deleted in new
chr11_KI270721v1_random	52665	52734	chr11_KI270721v1_random:52665-52734	3	+	52665	52665	8553170	1	69,	0,
#Deleted in new
chr11_KI270721v1_random	52894	53010	chr11_KI270721v1_random:52894-53010	3	+	52894	52894	8553170	1	116,	0,
#Deleted in new
chr11_KI270829v1_alt	4564	5275	chr11_KI270829v1_alt:4564-5275	7	+	4564	4564	16724991	1	711,	0,
#Deleted in new
chr11_KI270829v1_alt	16772	17841	chr11_KI270829v1_alt:16772-17841	3	-	16841	17810	789624	1	1069,	0,
#Deleted in new
chr11_KI270829v1_alt	45904	46840	chr11_KI270829v1_alt:45904-46840	3	-	45904	46840	789624	1	936,	0,
#Deleted in new
chr11_KI270829v1_alt	80218	81145	chr11_KI270829v1_alt:80218-81145	7	+	80218	80218	16724991	1	927,	0,
#Deleted in new
chr11_KI270829v1_alt	82266	137456	chr11_KI270829v1_alt:82266-137456	3	-	82266	82266	789624	8	1574,81,77,165,61,118,74,353,	0,4135,28241,28829,30323,31190,32094,54837,
#Deleted in new
chr11_KI270829v1_alt	99681	114483	chr11_KI270829v1_alt:99681-114483	0	-	99681	99681	8553170	6	115,77,119,94,118,123,	0,10826,11414,12908,13775,14679,
#Deleted in new
chr11_KI270829v1_alt	110507	114458	chr11_KI270829v1_alt:110507-114458	0	-	110507	110507	8553170	5	77,165,94,118,98,	0,588,2082,2949,3853,
#Deleted in new
chr11_KI270829v1_alt	112426	114486	chr11_KI270829v1_alt:112426-114486	0	-	112426	112426	8553170	3	224,118,126,	0,1030,1934,
#Deleted in new
chr11_KI270829v1_alt	120682	120780	chr11_KI270829v1_alt:120682-120780	3	-	120682	120682	8553170	1	98,	0,
#Deleted in new
chr11_KI270829v1_alt	159133	160163	chr11_KI270829v1_alt:159133-160163	3	-	159218	160163	789624	1	1030,	0,
#Deleted in new
chr11_KI270829v1_alt	170034	171095	chr11_KI270829v1_alt:170034-171095	3	-	170076	171021	789624	1	1061,	0,
#Deleted in new
chr11_KI270829v1_alt	190924	195158	chr11_KI270829v1_alt:190924-195158	3	-	191144	194996	0	2	1899,451,	0,3783,
#Deleted in new
chr11_KI270829v1_alt	194799	196927	chr11_KI270829v1_alt:194799-196927	0	-	194799	194996	789624	2	242,181,	0,1947,
#Deleted in new
chr11_KI270830v1_alt	36280	54157	chr11_KI270830v1_alt:36280-54157	3	-	38754	48063	0	7	3531,124,160,167,139,339,20,	0,3750,4068,4845,9807,11552,17857,
#Deleted in new
chr11_KI270830v1_alt	36287	48173	chr11_KI270830v1_alt:36287-48173	1	-	38754	48063	0	6	3524,124,160,167,139,341,	0,3743,4061,4838,9800,11545,
#Deleted in new
chr11_KI270830v1_alt	39759	41680	chr11_KI270830v1_alt:39759-41680	0	-	39759	39759	8553170	5	52,124,160,167,134,	0,271,589,1366,1787,
#Deleted in new
chr11_KI270830v1_alt	53589	79820	chr11_KI270830v1_alt:53589-79820	0	+	53589	53589	8553170	2	234,336,	0,25895,
#Deleted in new
chr11_KI270830v1_alt	54977	81421	chr11_KI270830v1_alt:54977-81421	3	+	54977	54977	789624	2	328,1937,	0,24507,
#Deleted in new
chr11_KI270830v1_alt	55493	79786	chr11_KI270830v1_alt:55493-79786	0	+	55493	55493	8553170	2	217,302,	0,23991,
#Deleted in new
chr11_KI270830v1_alt	55885	79678	chr11_KI270830v1_alt:55885-79678	0	+	55885	55885	8553170	2	215,194,	0,23599,
#Deleted in new
chr11_KI270830v1_alt	62728	68226	chr11_KI270830v1_alt:62728-68226	3	+	67067	67665	789624	3	918,249,1008,	0,4240,4490,
#Deleted in new
chr11_KI270830v1_alt	66578	67520	chr11_KI270830v1_alt:66578-67520	3	-	66649	67486	789624	1	942,	0,
#Deleted in new
chr11_KI270830v1_alt	79413	80531	chr11_KI270830v1_alt:79413-80531	3	-	79953	80487	789624	1	1118,	0,
#Deleted in new
chr11_KI270830v1_alt	89801	90700	chr11_KI270830v1_alt:89801-90700	3	-	89905	90622	789624	1	899,	0,
#Deleted in new
chr11_KI270830v1_alt	103194	104375	chr11_KI270830v1_alt:103194-104375	3	-	103643	104330	789624	1	1181,	0,
#Deleted in new
chr11_KI270830v1_alt	103643	104330	chr11_KI270830v1_alt:103643-104330	1	-	103643	104330	789624	2	170,490,	0,197,
#Deleted in new
chr11_KI270830v1_alt	112011	112944	chr11_KI270830v1_alt:112011-112944	3	+	112077	112791	789624	1	933,	0,
#Deleted in new
chr11_KI270830v1_alt	144820	145580	chr11_KI270830v1_alt:144820-145580	3	-	144820	144820	8553170	2	555,33,	0,727,
#Deleted in new
chr11_KI270830v1_alt	147833	150093	chr11_KI270830v1_alt:147833-150093	3	+	147833	147833	5263520	3	168,109,1155,	0,838,1105,
#Deleted in new
chr11_KI270830v1_alt	148103	150092	chr11_KI270830v1_alt:148103-150092	1	+	148103	148103	8553170	1	1989,	0,
#Deleted in new
chr11_KI270830v1_alt	165505	167866	chr11_KI270830v1_alt:165505-167866	3	-	165505	165505	5263520	3	766,109,192,	0,925,2169,
#Deleted in new
chr11_KI270830v1_alt	170533	171293	chr11_KI270830v1_alt:170533-171293	3	+	170533	170533	8553170	2	33,554,	0,206,
#Deleted in new
chr11_KI270831v1_alt	1030	81275	chr11_KI270831v1_alt:1030-81275	3	+	1030	80168	789624	5	76,95,47,62,1344,	0,7116,8142,9132,78901,
#Deleted in new
chr11_KI270831v1_alt	1030	80403	chr11_KI270831v1_alt:1030-80403	0	+	1030	80168	789624	5	76,95,47,62,472,	0,7116,8142,9132,78901,
#Deleted in new
chr11_KI270831v1_alt	3542	3764	chr11_KI270831v1_alt:3542-3764	7	+	3542	3542	16724991	1	222,	0,
#Deleted in new
chr11_KI270831v1_alt	9761	80676	chr11_KI270831v1_alt:9761-80676	0	+	9761	9761	8553170	3	239,62,745,	0,401,70170,
#Deleted in new
chr11_KI270831v1_alt	72298	93726	chr11_KI270831v1_alt:72298-93726	3	-	72298	72298	789624	3	308,197,579,	0,18601,20849,
#Deleted in new
chr11_KI270831v1_alt	102233	104278	chr11_KI270831v1_alt:102233-104278	3	+	102233	102233	789624	2	804,261,	0,1784,
#Deleted in new
chr11_KI270831v1_alt	103609	103671	chr11_KI270831v1_alt:103609-103671	3	+	103609	103609	8553170	1	62,	0,
#Deleted in new
chr11_KI270831v1_alt	115391	118091	chr11_KI270831v1_alt:115391-118091	3	-	116182	117699	789624	3	703,136,1212,	0,786,1488,
#Deleted in new
chr11_KI270831v1_alt	115391	117959	chr11_KI270831v1_alt:115391-117959	1	-	116089	117666	789624	4	703,136,265,116,	0,786,2020,2452,
#Deleted in new
chr11_KI270831v1_alt	115396	118023	chr11_KI270831v1_alt:115396-118023	1	-	116182	117666	789624	4	698,136,797,180,	0,781,1483,2447,
#Deleted in new
chr11_KI270831v1_alt	115757	117981	chr11_KI270831v1_alt:115757-117981	1	-	116182	117699	789624	3	332,136,1102,	0,420,1122,
#Deleted in new
chr11_KI270831v1_alt	115853	116669	chr11_KI270831v1_alt:115853-116669	0	-	115853	115853	8553170	2	241,492,	0,324,
#Deleted in new
chr11_KI270831v1_alt	119990	135956	chr11_KI270831v1_alt:119990-135956	3	-	119990	119990	8553170	4	856,395,126,283,	0,11616,14808,15683,
#Deleted in new
chr11_KI270831v1_alt	120305	121641	chr11_KI270831v1_alt:120305-121641	0	-	120305	120305	8553170	2	541,123,	0,1213,
#Deleted in new
chr11_KI270831v1_alt	120307	135705	chr11_KI270831v1_alt:120307-135705	0	-	120307	120307	8553170	3	539,126,32,	0,14491,15366,
#Deleted in new
chr11_KI270831v1_alt	131931	157362	chr11_KI270831v1_alt:131931-157362	3	+	135560	157313	789624	11	86,276,98,161,133,119,108,101,102,121,237,	0,3497,8521,9484,9865,16909,18274,19592,22346,22680,25194,
#Deleted in new
chr11_KI270831v1_alt	134405	157362	chr11_KI270831v1_alt:134405-157362	1	+	135560	157313	789624	11	172,276,98,161,133,119,108,101,102,121,237,	0,1023,6047,7010,7391,14435,15800,17118,19872,20206,22720,
#Deleted in new
chr11_KI270831v1_alt	134632	157362	chr11_KI270831v1_alt:134632-157362	1	+	135560	157313	789624	11	301,276,98,161,133,119,108,101,102,121,237,	0,796,5820,6783,7164,14208,15573,16891,19645,19979,22493,
#Deleted in new
chr11_KI270831v1_alt	135328	141576	chr11_KI270831v1_alt:135328-141576	0	+	135560	141576	789624	3	376,98,161,	0,5124,6087,
#Deleted in new
chr11_KI270831v1_alt	135428	157343	chr11_KI270831v1_alt:135428-157343	1	+	135560	157313	789624	8	276,98,119,108,101,102,121,218,	0,5024,13412,14777,16095,18849,19183,21697,
#Deleted in new
chr11_KI270831v1_alt	135590	148605	chr11_KI270831v1_alt:135590-148605	0	+	135590	135590	8553170	5	114,98,161,133,178,	0,4862,5825,6206,12837,
#Deleted in new
chr11_KI270831v1_alt	141492	142037	chr11_KI270831v1_alt:141492-142037	0	+	141492	141492	8553170	2	84,241,	0,304,
#Deleted in new
chr11_KI270831v1_alt	148364	153456	chr11_KI270831v1_alt:148364-153456	0	+	148364	148364	8553170	3	595,108,1933,	0,1841,3159,
#Deleted in new
chr11_KI270831v1_alt	148454	157218	chr11_KI270831v1_alt:148454-157218	0	+	148454	148454	8553170	6	505,108,101,102,121,93,	0,1751,3069,5823,6157,8671,
#Deleted in new
chr11_KI270831v1_alt	148861	154013	chr11_KI270831v1_alt:148861-154013	0	+	148861	148861	8553170	4	98,108,101,443,	0,1344,2662,4709,
#Deleted in new
chr11_KI270831v1_alt	148900	157362	chr11_KI270831v1_alt:148900-157362	0	+	148900	148900	8553170	7	59,108,103,101,102,121,237,	0,1305,2222,2623,5377,5711,8225,
#Deleted in new
chr11_KI270831v1_alt	149166	157299	chr11_KI270831v1_alt:149166-157299	0	+	149166	149166	8553170	6	76,108,101,102,121,174,	0,1039,2357,5111,5445,7959,
#Deleted in new
chr11_KI270831v1_alt	154143	157356	chr11_KI270831v1_alt:154143-157356	0	+	154143	154143	8553170	3	236,121,231,	0,468,2982,
#Deleted in new
chr11_KI270831v1_alt	160387	161570	chr11_KI270831v1_alt:160387-161570	3	-	161020	161479	789624	2	395,560,	0,623,
#Deleted in new
chr11_KI270831v1_alt	175478	223447	chr11_KI270831v1_alt:175478-223447	3	-	176655	210290	789624	15	1216,57,30,120,23,146,140,72,132,87,142,100,59,31,124,	0,6829,7350,10098,11315,13970,15341,20253,25390,27036,27690,31614,33875,34798,47845,
#Deleted in new
chr11_KI270831v1_alt	175480	223447	chr11_KI270831v1_alt:175480-223447	1	-	180307	210290	789624	16	1214,38,57,30,120,23,146,140,72,132,87,142,100,59,31,124,	0,4795,6827,7348,10096,11313,13968,15339,20251,25388,27034,27688,31612,33873,34796,47843,
#Deleted in new
chr11_KI270831v1_alt	175485	183817	chr11_KI270831v1_alt:175485-183817	0	-	175485	175485	8553170	4	1209,38,57,989,	0,4790,6822,7343,
#Deleted in new
chr11_KI270831v1_alt	176111	182344	chr11_KI270831v1_alt:176111-182344	0	-	176111	176111	8553170	4	583,38,48,37,	0,4164,5906,6196,
#Deleted in new
chr11_KI270831v1_alt	176159	223447	chr11_KI270831v1_alt:176159-223447	1	-	176655	210290	789624	16	535,57,30,120,23,146,140,72,132,87,142,100,59,31,143,124,	0,6148,6669,9417,10634,13289,14660,19572,24709,26355,27009,30933,33194,34117,44039,47164,
#Deleted in new
chr11_KI270831v1_alt	176378	186840	chr11_KI270831v1_alt:176378-186840	0	-	176378	176378	8553170	5	316,57,30,120,47,	0,5929,6450,9198,10415,
#Deleted in new
chr11_KI270831v1_alt	176482	183086	chr11_KI270831v1_alt:176482-183086	0	-	176482	176482	8553170	5	212,38,57,30,140,	0,3793,5825,6346,6464,
#Deleted in new
chr11_KI270831v1_alt	176644	200970	chr11_KI270831v1_alt:176644-200970	0	-	185448	200970	789624	10	50,57,30,110,120,23,146,140,72,102,	0,5663,6184,8706,8932,10149,12804,14175,19087,24224,
#Deleted in new
chr11_KI270831v1_alt	185353	195764	chr11_KI270831v1_alt:185353-195764	0	-	185353	185353	8553170	5	343,23,146,140,33,	0,1440,4095,5466,10378,
#Deleted in new
chr11_KI270831v1_alt	185537	191181	chr11_KI270831v1_alt:185537-191181	0	-	185537	185537	8553170	4	159,23,146,362,	0,1256,3911,5282,
#Deleted in new
chr11_KI270831v1_alt	185611	189984	chr11_KI270831v1_alt:185611-189984	0	-	185611	185611	8553170	3	85,23,536,	0,1182,3837,
#Deleted in new
chr11_KI270831v1_alt	189540	223358	chr11_KI270831v1_alt:189540-223358	0	-	189540	210290	789624	10	54,140,72,132,87,178,100,59,31,35,	0,1279,6191,11328,12974,13628,17552,19813,20736,33783,
#Deleted in new
chr11_KI270831v1_alt	194822	194945	chr11_KI270831v1_alt:194822-194945	3	-	194822	194822	789624	1	123,	0,
#Deleted in new
chr11_KI270831v1_alt	195776	223370	chr11_KI270831v1_alt:195776-223370	0	-	195776	207172	789624	7	27,132,87,142,100,59,47,	0,5092,6738,7392,11316,13577,27547,
#Deleted in new
chr11_KI270831v1_alt	200868	223172	chr11_KI270831v1_alt:200868-223172	0	-	200868	210290	789624	7	132,87,142,100,59,31,309,	0,1646,2300,6224,8485,9408,21995,
#Deleted in new
chr11_KI270831v1_alt	200930	223328	chr11_KI270831v1_alt:200930-223328	0	-	200930	210290	789624	7	70,87,178,100,59,31,30,	0,1584,2238,6162,8423,9346,22368,
#Deleted in new
chr11_KI270831v1_alt	200981	223328	chr11_KI270831v1_alt:200981-223328	0	-	200981	210290	789624	9	19,87,142,100,59,31,50,69,30,	0,1533,2187,6111,8372,9295,18165,19217,22317,
#Deleted in new
chr11_KI270831v1_alt	202516	220338	chr11_KI270831v1_alt:202516-220338	0	-	202516	210290	789624	7	85,142,100,59,31,68,140,	0,652,4576,6837,7760,12307,17682,
#Deleted in new
chr11_KI270831v1_alt	202530	223332	chr11_KI270831v1_alt:202530-223332	0	-	202530	210290	789624	7	71,142,100,59,31,98,34,	0,638,4562,6823,7746,10249,20768,
#Deleted in new
chr11_KI270831v1_alt	202595	223329	chr11_KI270831v1_alt:202595-223329	0	-	202595	210290	789624	9	6,142,100,59,31,50,69,84,31,	0,573,4497,6758,7681,16551,17603,19383,20703,
#Deleted in new
chr11_KI270831v1_alt	203215	220229	chr11_KI270831v1_alt:203215-220229	0	-	203215	210290	789624	5	131,100,59,31,31,	0,3877,6138,7061,16983,
#Deleted in new
chr11_KI270831v1_alt	203247	223328	chr11_KI270831v1_alt:203247-223328	0	-	203247	210290	789624	8	63,100,59,31,68,50,143,30,	0,3845,6106,7029,11576,15899,16951,20051,
#Deleted in new
chr11_KI270831v1_alt	220932	222414	chr11_KI270831v1_alt:220932-222414	3	+	220932	220932	8553170	1	1482,	0,
#Deleted in new
chr11_KI270831v1_alt	231983	288469	chr11_KI270831v1_alt:231983-288469	1	-	232175	288399	789624	23	327,84,60,68,81,82,69,190,98,104,130,129,113,122,89,141,150,99,97,89,92,249,95,	0,1048,1619,4441,5953,11268,14854,16179,16930,17481,17693,18212,19293,25749,28069,28376,37091,38235,38876,39937,41206,46799,56391,
#Deleted in new
chr11_KI270831v1_alt	231983	288645	chr11_KI270831v1_alt:231983-288645	1	-	232175	288399	789624	22	327,84,60,68,81,82,69,190,98,104,130,129,113,122,89,141,150,99,97,89,92,271,	0,1048,1619,4441,5953,11268,14854,16179,16930,17481,17693,18212,19293,25749,28069,28376,37091,38235,38876,39937,41206,56391,
#Deleted in new
chr11_KI270831v1_alt	231983	288469	chr11_KI270831v1_alt:231983-288469	0	-	272035	288399	789624	23	327,84,60,68,81,82,69,190,98,104,130,129,113,122,89,141,150,99,97,136,92,249,95,	0,1048,1619,4441,5953,11268,14854,16179,16930,17481,17693,18212,19293,25749,28069,28376,37091,38235,38876,39937,41206,46799,56391,
#Deleted in new
chr11_KI270831v1_alt	231990	288450	chr11_KI270831v1_alt:231990-288450	1	-	232249	288399	789624	22	320,92,60,68,81,82,69,190,98,104,130,129,113,122,89,141,150,99,97,89,92,76,	0,1033,1612,4434,5946,11261,14847,16172,16923,17474,17686,18205,19286,25742,28062,28369,37084,38228,38869,39930,41199,56384,
#Deleted in new
chr11_KI270831v1_alt	231990	238068	chr11_KI270831v1_alt:231990-238068	0	-	231990	231990	8553170	4	320,631,68,132,	0,1041,4434,5946,
#Deleted in new
chr11_KI270831v1_alt	231991	239955	chr11_KI270831v1_alt:231991-239955	2	-	231991	231991	8553170	5	319,205,60,68,2019,	0,1040,1611,4433,5945,
#Deleted in new
chr11_KI270831v1_alt	231991	240591	chr11_KI270831v1_alt:231991-240591	0	-	231991	231991	8553170	5	319,84,68,81,1914,	0,1040,4433,5945,6686,
#Deleted in new
chr11_KI270831v1_alt	231991	288434	chr11_KI270831v1_alt:231991-288434	1	-	232249	285972	789624	23	319,92,60,68,81,82,69,190,98,104,130,129,113,122,89,141,150,99,97,89,92,163,60,	0,1032,1611,4433,5945,11260,14846,16171,16922,17473,17685,18204,19285,25741,28061,28368,37083,38227,38868,39929,41198,53917,56383,
#Deleted in new
chr11_KI270831v1_alt	231991	288412	chr11_KI270831v1_alt:231991-288412	0	-	231991	231991	8553170	19	319,84,60,68,81,82,69,1435,130,129,113,2409,141,150,99,97,136,92,38,	0,1040,1611,4433,5945,11260,14846,16171,17685,18204,19285,25741,28368,37083,38227,38868,39929,41198,56383,
#Deleted in new
chr11_KI270831v1_alt	250246	260114	chr11_KI270831v1_alt:250246-260114	0	-	250246	250246	8553170	4	78,113,122,345,	0,1030,7486,9523,
#Deleted in new
chr11_KI270831v1_alt	260065	260810	chr11_KI270831v1_alt:260065-260810	0	+	260065	260065	8553170	2	19,35,	0,710,
#Deleted in new
chr11_KI270831v1_alt	260140	288461	chr11_KI270831v1_alt:260140-288461	0	-	272035	288399	789624	7	360,150,99,97,136,92,87,	0,8934,10078,10719,11780,13049,28234,
#Deleted in new
chr11_KI270831v1_alt	260450	272285	chr11_KI270831v1_alt:260450-272285	3	+	260450	260450	8553170	2	2183,481,	0,11354,
#Deleted in new
chr11_KI270831v1_alt	269155	271113	chr11_KI270831v1_alt:269155-271113	0	-	269155	269155	8553170	3	69,99,254,	0,1063,1704,
#Deleted in new
chr11_KI270831v1_alt	270218	288473	chr11_KI270831v1_alt:270218-288473	0	-	270218	270218	8553170	5	99,97,89,166,99,	0,641,1702,2971,18156,
#Deleted in new
chr11_KI270831v1_alt	270239	288448	chr11_KI270831v1_alt:270239-288448	0	-	271581	288399	789624	6	78,97,134,89,92,74,	0,620,1233,1681,2950,18135,
#Deleted in new
chr11_KI270831v1_alt	271548	288469	chr11_KI270831v1_alt:271548-288469	0	-	271548	271548	8553170	5	58,89,92,249,95,	0,372,1641,7234,16826,
#Deleted in new
chr11_KI270831v1_alt	272038	288399	chr11_KI270831v1_alt:272038-288399	1	-	272038	288399	789624	3	18,92,25,	0,1151,16336,
#Deleted in new
chr11_KI270831v1_alt	279388	279551	chr11_KI270831v1_alt:279388-279551	3	-	279388	279388	8553170	1	163,	0,
#Deleted in new
chr11_KI270831v1_alt	286366	288446	chr11_KI270831v1_alt:286366-288446	0	-	286366	286366	8553170	1	2080,	0,
#Deleted in new
chr11_KI270832v1_alt	3535	9086	chr11_KI270832v1_alt:3535-9086	0	+	3535	3535	8553170	2	83,361,	0,5190,
#Deleted in new
chr11_KI270832v1_alt	3535	8735	chr11_KI270832v1_alt:3535-8735	0	+	3535	3535	8553170	2	83,10,	0,5190,
#Deleted in new
chr11_KI270832v1_alt	3535	17111	chr11_KI270832v1_alt:3535-17111	0	+	3535	3535	8553170	4	83,68,135,51,	0,5190,13044,13525,
#Deleted in new
chr11_KI270832v1_alt	3535	21028	chr11_KI270832v1_alt:3535-21028	3	+	3535	20223	789624	10	83,68,135,51,114,119,115,146,186,968,	0,5190,13044,13525,14304,14634,15505,15693,15988,16525,
#Deleted in new
chr11_KI270832v1_alt	3535	21040	chr11_KI270832v1_alt:3535-21040	0	+	3535	3535	8553170	11	83,68,135,51,114,119,115,146,186,223,279,	0,5190,13044,13525,14304,14634,15505,15693,15988,16525,17226,
#Deleted in new
chr11_KI270832v1_alt	3560	10235	chr11_KI270832v1_alt:3560-10235	0	+	3560	3560	8553170	3	58,68,470,	0,5165,6205,
#Deleted in new
chr11_KI270832v1_alt	8725	16694	chr11_KI270832v1_alt:8725-16694	0	+	8725	8725	8553170	2	68,115,	0,7854,
#Deleted in new
chr11_KI270832v1_alt	16879	19371	chr11_KI270832v1_alt:16879-19371	0	+	16879	16879	8553170	5	232,114,119,115,143,	0,960,1290,2161,2349,
#Deleted in new
chr11_KI270832v1_alt	18990	20187	chr11_KI270832v1_alt:18990-20187	0	+	18990	18990	8553170	4	165,146,186,127,	0,238,533,1070,
#Deleted in new
chr11_KI270832v1_alt	19431	20361	chr11_KI270832v1_alt:19431-20361	0	+	19431	19431	8553170	2	278,301,	0,629,
#Deleted in new
chr11_KI270832v1_alt	24152	33211	chr11_KI270832v1_alt:24152-33211	1	-	24331	31803	0	9	267,171,171,171,171,171,171,171,1509,	0,371,3459,3945,4251,4503,5317,5972,7550,
#Deleted in new
chr11_KI270832v1_alt	24153	36462	chr11_KI270832v1_alt:24153-36462	1	-	24331	31803	0	10	266,171,171,171,171,171,171,171,188,213,	0,370,3458,3944,4250,4502,5316,5971,7549,12096,
#Deleted in new
chr11_KI270832v1_alt	24153	26343	chr11_KI270832v1_alt:24153-26343	0	-	24153	24153	8553170	2	266,1820,	0,370,
#Deleted in new
chr11_KI270832v1_alt	24155	36441	chr11_KI270832v1_alt:24155-36441	1	-	24331	31803	0	11	264,171,171,171,171,171,171,171,188,173,192,	0,368,3456,3942,4248,4500,5314,5969,7547,10309,12094,
#Deleted in new
chr11_KI270832v1_alt	24155	36894	chr11_KI270832v1_alt:24155-36894	1	-	24331	31803	0	10	264,171,171,171,171,171,171,171,120,141,	0,368,3456,3942,4248,4500,5314,5969,7547,12598,
#Deleted in new
chr11_KI270832v1_alt	24156	35522	chr11_KI270832v1_alt:24156-35522	0	-	24156	24156	8553170	9	263,171,171,171,171,985,171,120,1058,	0,367,3455,3941,4247,4499,5968,7546,10308,
#Deleted in new
chr11_KI270832v1_alt	24163	36898	chr11_KI270832v1_alt:24163-36898	0	-	30372	31803	789624	10	256,171,171,171,171,171,95,255,188,145,	0,360,3448,3934,4240,4492,5306,5961,7539,12590,
#Deleted in new
chr11_KI270832v1_alt	24184	28570	chr11_KI270832v1_alt:24184-28570	0	-	24345	28570	789624	4	510,171,171,167,	0,3427,3913,4219,
#Deleted in new
chr11_KI270832v1_alt	24186	36859	chr11_KI270832v1_alt:24186-36859	1	-	24331	31803	0	11	233,171,171,171,171,171,171,171,120,173,106,	0,337,3425,3911,4217,4469,5283,5938,7516,10278,12567,
#Deleted in new
chr11_KI270832v1_alt	24188	36426	chr11_KI270832v1_alt:24188-36426	1	-	24331	31803	0	10	231,171,171,171,171,171,171,171,120,177,	0,335,3423,3909,4215,4467,5281,5936,7514,12061,
#Deleted in new
chr11_KI270832v1_alt	24192	36862	chr11_KI270832v1_alt:24192-36862	1	-	24331	31803	0	11	227,171,171,171,171,171,171,171,188,173,109,	0,331,3419,3905,4211,4463,5277,5932,7510,10272,12561,
#Deleted in new
chr11_KI270832v1_alt	24201	36941	chr11_KI270832v1_alt:24201-36941	3	-	24331	31803	0	10	218,171,171,171,171,171,171,171,188,188,	0,322,3410,3896,4202,4454,5268,5923,7501,12552,
#Deleted in new
chr11_KI270832v1_alt	24648	36868	chr11_KI270832v1_alt:24648-36868	0	-	28136	31803	789624	6	46,171,59,113,120,115,	0,2963,3449,5534,7054,12105,
#Deleted in new
chr11_KI270832v1_alt	28428	36905	chr11_KI270832v1_alt:28428-36905	0	-	28428	28428	8553170	6	146,171,95,171,120,152,	0,227,1041,1696,3274,8325,
#Deleted in new
chr11_KI270832v1_alt	28671	36437	chr11_KI270832v1_alt:28671-36437	0	-	28671	31803	789624	5	155,171,171,188,188,	0,798,1453,3031,7578,
#Deleted in new
chr11_KI270832v1_alt	28687	34193	chr11_KI270832v1_alt:28687-34193	0	-	28687	31803	789624	5	139,171,171,120,126,	0,782,1437,3015,5380,
#Deleted in new
chr11_KI270832v1_alt	28702	36400	chr11_KI270832v1_alt:28702-36400	0	-	28702	31803	789624	6	124,171,171,188,65,151,	0,767,1422,3000,5762,7547,
#Deleted in new
chr11_KI270832v1_alt	29040	36853	chr11_KI270832v1_alt:29040-36853	0	-	29040	29040	8553170	4	600,171,188,100,	0,1084,2662,7713,
#Deleted in new
chr11_KI270832v1_alt	29141	36900	chr11_KI270832v1_alt:29141-36900	0	-	29141	29141	8553170	5	100,171,171,120,147,	0,328,983,2561,7612,
#Deleted in new
chr11_KI270832v1_alt	29317	31856	chr11_KI270832v1_alt:29317-31856	0	-	29317	29317	8553170	3	247,171,154,	0,807,2385,
#Deleted in new
chr11_KI270832v1_alt	29537	36836	chr11_KI270832v1_alt:29537-36836	0	-	29537	29537	8553170	4	758,188,173,83,	0,2165,4927,7216,
#Deleted in new
chr11_KI270832v1_alt	30275	35957	chr11_KI270832v1_alt:30275-35957	0	-	30275	31803	789624	5	20,188,173,84,239,	0,1427,4189,4743,5443,
#Deleted in new
chr11_KI270832v1_alt	30480	32824	chr11_KI270832v1_alt:30480-32824	0	-	30480	30480	8553170	1	2344,	0,
#Deleted in new
chr11_KI270832v1_alt	31777	35980	chr11_KI270832v1_alt:31777-35980	0	-	31777	31803	789624	3	45,173,262,	0,2687,3941,
#Deleted in new
chr11_KI270832v1_alt	31854	35997	chr11_KI270832v1_alt:31854-35997	0	-	31854	31854	8553170	3	36,173,279,	0,2610,3864,
#Deleted in new
chr11_KI270832v1_alt	58547	61902	chr11_KI270832v1_alt:58547-61902	3	+	58547	58547	8553170	2	41,3108,	0,247,
#Deleted in new
chr11_KI270832v1_alt	61882	64980	chr11_KI270832v1_alt:61882-64980	1	-	62276	63963	0	5	514,160,179,164,83,	0,1211,1524,1970,3015,
#Deleted in new
chr11_KI270832v1_alt	61882	63253	chr11_KI270832v1_alt:61882-63253	0	-	61882	61882	8553170	3	389,82,160,	0,1035,1211,
#Deleted in new
chr11_KI270832v1_alt	61882	64016	chr11_KI270832v1_alt:61882-64016	1	-	62936	63963	0	5	514,82,160,179,164,	0,1035,1211,1524,1970,
#Deleted in new
chr11_KI270832v1_alt	61882	65179	chr11_KI270832v1_alt:61882-65179	0	-	62936	63963	0	7	281,125,82,160,179,164,123,	0,389,1035,1211,1524,1970,3174,
#Deleted in new
chr11_KI270832v1_alt	61883	65191	chr11_KI270832v1_alt:61883-65191	1	-	62276	63963	0	5	513,160,179,164,135,	0,1210,1523,1969,3173,
#Deleted in new
chr11_KI270832v1_alt	61883	65191	chr11_KI270832v1_alt:61883-65191	3	-	62936	63963	0	6	513,82,160,179,164,135,	0,1034,1210,1523,1969,3173,
#Deleted in new
chr11_KI270832v1_alt	61886	63236	chr11_KI270832v1_alt:61886-63236	0	-	61886	61886	8553170	4	277,125,82,143,	0,385,1031,1207,
#Deleted in new
chr11_KI270832v1_alt	62016	65175	chr11_KI270832v1_alt:62016-65175	1	-	62276	63963	0	6	147,125,160,179,164,119,	0,255,1077,1390,1836,3040,
#Deleted in new
chr11_KI270832v1_alt	62282	63617	chr11_KI270832v1_alt:62282-63617	0	-	62282	62282	8553170	3	114,160,211,	0,811,1124,
#Deleted in new
chr11_KI270832v1_alt	63435	66928	chr11_KI270832v1_alt:63435-66928	0	-	63435	63435	8553170	3	150,164,435,	0,417,3058,
#Deleted in new
chr11_KI270832v1_alt	63919	64228	chr11_KI270832v1_alt:63919-64228	0	-	63919	63963	789624	2	97,70,	0,239,
#Deleted in new
chr11_KI270832v1_alt	67167	84556	chr11_KI270832v1_alt:67167-84556	3	+	70325	83916	789624	14	79,263,147,188,88,61,97,201,172,177,65,143,134,954,	0,1071,2053,3147,4010,7192,12374,12544,13603,14123,14375,14562,15041,16435,
#Deleted in new
chr11_KI270832v1_alt	84494	86079	chr11_KI270832v1_alt:84494-86079	0	-	84494	84494	8553170	4	257,626,120,229,	0,469,1160,1356,
#Deleted in new
chr11_KI270832v1_alt	84496	90434	chr11_KI270832v1_alt:84496-90434	3	-	84619	90371	789624	14	255,199,197,120,184,97,263,89,69,156,88,153,124,97,	0,467,896,1158,1354,1654,1997,2561,2734,3046,3323,3776,4018,5841,
#Deleted in new
chr11_KI270832v1_alt	86584	90385	chr11_KI270832v1_alt:86584-90385	0	-	86584	89060	789624	9	172,89,69,156,88,153,124,152,48,	0,473,646,958,1235,1688,1930,2421,3753,
#Deleted in new
chr11_KI270832v1_alt	87057	89041	chr11_KI270832v1_alt:87057-89041	0	-	87057	88702	789624	7	89,69,156,88,153,207,36,	0,173,485,762,1215,1457,1948,
#Deleted in new
chr11_KI270832v1_alt	87253	89761	chr11_KI270832v1_alt:87253-89761	3	+	87253	87253	8553170	2	1882,324,	0,2184,
#Deleted in new
chr11_KI270832v1_alt	88134	89798	chr11_KI270832v1_alt:88134-89798	0	-	88134	88134	8553170	3	309,124,175,	0,380,1489,
#Deleted in new
chr11_KI270832v1_alt	88550	89761	chr11_KI270832v1_alt:88550-89761	1	+	88550	88550	8553170	3	43,156,324,	0,429,887,
#Deleted in new
chr11_KI270832v1_alt	89134	89762	chr11_KI270832v1_alt:89134-89762	0	+	89134	89134	8553170	2	208,325,	0,303,
#Deleted in new
chr11_KI270832v1_alt	90058	93649	chr11_KI270832v1_alt:90058-93649	1	+	91424	93036	789624	4	111,131,698,805,	0,1359,1676,2786,
#Deleted in new
chr11_KI270832v1_alt	90611	93668	chr11_KI270832v1_alt:90611-93668	1	+	91424	93036	789624	4	78,131,698,824,	0,806,1123,2233,
#Deleted in new
chr11_KI270832v1_alt	90626	93636	chr11_KI270832v1_alt:90626-93636	0	+	91424	91978	789624	4	63,131,693,792,	0,791,1113,2218,
#Deleted in new
chr11_KI270832v1_alt	90642	92112	chr11_KI270832v1_alt:90642-92112	0	+	90642	90642	8553170	2	47,378,	0,1092,
#Deleted in new
chr11_KI270832v1_alt	90707	93674	chr11_KI270832v1_alt:90707-93674	3	+	91424	93301	789624	6	426,131,698,129,83,461,	0,710,1027,2137,2344,2506,
#Deleted in new
chr11_KI270832v1_alt	91105	93677	chr11_KI270832v1_alt:91105-93677	1	+	91424	93225	789624	5	28,131,698,129,464,	0,312,629,1739,2108,
#Deleted in new
chr11_KI270832v1_alt	91202	91861	chr11_KI270832v1_alt:91202-91861	0	+	91424	91861	789624	2	346,127,	0,532,
#Deleted in new
chr11_KI270832v1_alt	92040	93341	chr11_KI270832v1_alt:92040-93341	0	+	92040	93036	789624	3	392,290,128,	0,804,1173,
#Deleted in new
chr11_KI270832v1_alt	95314	98075	chr11_KI270832v1_alt:95314-98075	3	-	95314	95314	789624	2	1896,69,	0,2692,
#Deleted in new
chr11_KI270832v1_alt	96737	98063	chr11_KI270832v1_alt:96737-98063	0	-	96737	96737	8553170	2	602,57,	0,1269,
#Deleted in new
chr11_KI270832v1_alt	96798	98112	chr11_KI270832v1_alt:96798-98112	1	-	96798	96798	8553170	2	710,106,	0,1208,
#Deleted in new
chr11_KI270832v1_alt	97180	98024	chr11_KI270832v1_alt:97180-98024	0	-	97180	97180	8553170	2	328,39,	0,805,
#Deleted in new
chr11_KI270832v1_alt	106141	142115	chr11_KI270832v1_alt:106141-142115	3	+	111187	141670	789624	18	107,115,120,206,84,116,98,176,130,128,182,120,155,2655,152,261,129,589,	0,5025,5495,10837,15138,16313,20677,21149,22127,25326,28870,29356,30193,30817,33947,34252,34705,35385,
#Deleted in new
chr11_KI270832v1_alt	106141	141936	chr11_KI270832v1_alt:106141-141936	0	+	111187	140628	789624	18	107,115,120,206,84,116,98,176,130,128,182,120,155,2655,152,95,129,410,	0,5025,5495,10837,15138,16313,20677,21149,22127,25326,28870,29356,30193,30817,33947,34418,34705,35385,
#Deleted in new
chr11_KI270832v1_alt	106176	141857	chr11_KI270832v1_alt:106176-141857	1	+	111187	141670	789624	18	72,106,117,206,84,116,98,176,130,128,182,120,155,2655,152,261,129,331,	0,4990,5463,10802,15103,16278,20642,21114,22092,25291,28835,29321,30158,30782,33912,34217,34670,35350,
#Deleted in new
chr11_KI270832v1_alt	106176	141857	chr11_KI270832v1_alt:106176-141857	1	+	111187	141670	789624	18	72,115,120,206,84,116,98,176,130,128,182,117,155,2655,152,261,129,331,	0,4990,5460,10802,15103,16278,20642,21114,22092,25291,28835,29324,30158,30782,33912,34217,34670,35350,
#Deleted in new
chr11_KI270832v1_alt	106176	141857	chr11_KI270832v1_alt:106176-141857	1	+	111187	141670	789624	18	72,115,117,206,84,116,98,176,130,128,182,117,155,2655,152,261,129,331,	0,4990,5463,10802,15103,16278,20642,21114,22092,25291,28835,29324,30158,30782,33912,34217,34670,35350,
#Deleted in new
chr11_KI270832v1_alt	131550	136735	chr11_KI270832v1_alt:131550-136735	0	+	131550	131550	8553170	4	45,182,120,401,	0,3461,3947,4784,
#Deleted in new
chr11_KI270832v1_alt	142445	145519	chr11_KI270832v1_alt:142445-145519	1	-	142537	144765	789624	10	248,119,390,81,87,226,59,188,163,27,	0,446,653,1232,1398,1621,1923,2244,2544,3047,
#Deleted in new
chr11_KI270832v1_alt	142447	145621	chr11_KI270832v1_alt:142447-145621	1	-	142537	145211	0	9	246,119,390,81,87,226,59,211,632,	0,444,651,1230,1396,1619,1921,2242,2542,
#Deleted in new
chr11_KI270832v1_alt	142447	145543	chr11_KI270832v1_alt:142447-145543	1	-	142537	145257	0	9	246,119,390,81,226,59,211,163,306,	0,444,651,1230,1619,1921,2242,2542,2790,
#Deleted in new
chr11_KI270832v1_alt	142451	145898	chr11_KI270832v1_alt:142451-145898	3	-	142537	145257	0	11	242,119,390,81,87,226,59,211,163,303,87,	0,440,647,1226,1392,1615,1917,2238,2538,2786,3360,
#Deleted in new
chr11_KI270832v1_alt	142453	145849	chr11_KI270832v1_alt:142453-145849	0	-	143888	145257	0	9	240,119,390,253,59,211,163,303,38,	0,438,645,1224,1915,2236,2536,2784,3358,
#Deleted in new
chr11_KI270832v1_alt	142468	145621	chr11_KI270832v1_alt:142468-145621	1	-	142537	145211	789624	8	225,119,390,81,226,59,211,632,	0,423,630,1209,1598,1900,2221,2521,
#Deleted in new
chr11_KI270832v1_alt	142475	143747	chr11_KI270832v1_alt:142475-143747	0	-	142475	142475	8553170	4	218,134,267,70,	0,416,746,1202,
#Deleted in new
chr11_KI270832v1_alt	142475	145543	chr11_KI270832v1_alt:142475-145543	0	-	143888	145257	0	9	218,119,390,81,87,59,211,163,306,	0,416,623,1202,1368,1893,2214,2514,2762,
#Deleted in new
chr11_KI270832v1_alt	142480	143484	chr11_KI270832v1_alt:142480-143484	0	-	142480	142480	8553170	2	213,593,	0,411,
#Deleted in new
chr11_KI270832v1_alt	142483	145882	chr11_KI270832v1_alt:142483-145882	0	-	143461	145257	789624	9	210,119,390,81,56,211,163,303,71,	0,408,615,1194,1885,2206,2506,2754,3328,
#Deleted in new
chr11_KI270832v1_alt	142483	145869	chr11_KI270832v1_alt:142483-145869	1	-	142537	145211	0	10	210,119,390,81,87,226,59,211,551,58,	0,408,615,1194,1360,1583,1885,2206,2506,3328,
#Deleted in new
chr11_KI270832v1_alt	143445	144290	chr11_KI270832v1_alt:143445-144290	0	-	143445	143445	8553170	2	43,613,	0,232,
#Deleted in new
chr11_KI270832v1_alt	143714	145878	chr11_KI270832v1_alt:143714-145878	0	-	143714	143714	8553170	6	44,87,59,211,551,67,	0,129,654,975,1275,2097,
#Deleted in new
chr11_KI270832v1_alt	143901	144780	chr11_KI270832v1_alt:143901-144780	0	-	143901	143901	8553170	2	526,91,	0,788,
#Deleted in new
chr11_KI270832v1_alt	143982	145543	chr11_KI270832v1_alt:143982-145543	0	-	143982	143982	8553170	5	310,59,211,163,306,	0,386,707,1007,1255,
#Deleted in new
chr11_KI270832v1_alt	144675	145837	chr11_KI270832v1_alt:144675-145837	0	-	144675	144675	8553170	3	477,303,26,	0,562,1136,
#Deleted in new
chr11_KI270832v1_alt	146463	154966	chr11_KI270832v1_alt:146463-154966	1	-	147249	154801	789624	15	1206,158,582,85,114,201,98,91,171,111,102,93,51,176,250,	0,1389,2034,2741,2909,3116,3502,3731,4515,4780,4997,5247,7648,7992,8253,
#Deleted in new
chr11_KI270832v1_alt	146475	155977	chr11_KI270832v1_alt:146475-155977	3	-	147249	154801	789624	16	1194,158,582,85,114,201,98,91,171,111,102,93,51,176,350,58,	0,1377,2022,2729,2897,3104,3490,3719,4503,4768,4985,5235,7636,7980,8241,9444,
#Deleted in new
chr11_KI270832v1_alt	147154	155068	chr11_KI270832v1_alt:147154-155068	1	-	147249	154801	789624	14	515,158,85,114,201,98,91,171,111,102,93,51,176,352,	0,698,2050,2218,2425,2811,3040,3824,4089,4306,4556,6957,7301,7562,
#Deleted in new
chr11_KI270832v1_alt	147154	154831	chr11_KI270832v1_alt:147154-154831	0	-	154255	154801	789624	15	515,158,582,85,114,201,98,91,171,111,102,93,204,176,115,	0,698,1343,2050,2218,2425,2811,3040,3824,4089,4306,4556,6957,7301,7562,
#Deleted in new
chr11_KI270832v1_alt	149314	154854	chr11_KI270832v1_alt:149314-154854	0	-	149314	149314	8553170	10	172,201,98,91,171,111,102,51,176,138,	0,265,651,880,1664,1929,2146,4797,5141,5402,
#Deleted in new
chr11_KI270832v1_alt	149586	151036	chr11_KI270832v1_alt:149586-151036	0	-	149586	149586	8553170	4	194,65,91,58,	0,379,608,1392,
#Deleted in new
chr11_KI270832v1_alt	151115	154854	chr11_KI270832v1_alt:151115-154854	0	-	151115	154801	789624	6	47,111,102,51,176,138,	0,128,345,2996,3340,3601,
#Deleted in new
chr11_KI270832v1_alt	151295	154854	chr11_KI270832v1_alt:151295-154854	0	-	151295	154801	789624	6	59,102,24,51,176,138,	0,165,415,2816,3160,3421,
#Deleted in new
chr11_KI270832v1_alt	151318	154854	chr11_KI270832v1_alt:151318-154854	0	-	151318	151469	789624	6	36,102,93,51,176,38,	0,142,392,2793,3137,3498,
#Deleted in new
chr11_KI270832v1_alt	156329	157042	chr11_KI270832v1_alt:156329-157042	3	-	156329	157042	789624	4	100,93,102,71,	0,266,457,642,
#Deleted in new
chr11_KI270832v1_alt	167165	170577	chr11_KI270832v1_alt:167165-170577	3	+	167177	170474	789624	4	297,113,659,306,	0,2138,2353,3106,
#Deleted in new
chr11_KI270832v1_alt	168927	169664	chr11_KI270832v1_alt:168927-169664	0	+	168927	168927	8553170	3	102,113,146,	0,376,591,
#Deleted in new
chr11_KI270832v1_alt	176112	206708	chr11_KI270832v1_alt:176112-206708	0	-	176429	206708	789624	3	422,90,248,	0,9605,30348,
#Deleted in new
chr11_KI270832v1_alt	176112	206708	chr11_KI270832v1_alt:176112-206708	0	-	183071	206708	789624	4	422,246,90,248,	0,6806,9605,30348,
#Deleted in new
chr11_KI270832v1_alt	176113	178476	chr11_KI270832v1_alt:176113-178476	0	-	176113	176113	8553170	2	421,270,	0,2093,
#Deleted in new
chr11_KI270832v1_alt	176429	206708	chr11_KI270832v1_alt:176429-206708	3	-	176429	206708	789624	4	105,90,42,248,	0,9288,9941,30031,
#Deleted in new
chr11_KI270832v1_alt	185696	206708	chr11_KI270832v1_alt:185696-206708	0	-	185696	185696	8553170	2	111,248,	0,20764,
#Deleted in new
chr11_KI270832v1_alt	185717	206708	chr11_KI270832v1_alt:185717-206708	0	-	185717	185717	8553170	2	90,248,	0,20743,
#Deleted in new
chr11_KI270832v1_alt	197844	209843	chr11_KI270832v1_alt:197844-209843	3	+	197844	197844	8553170	3	581,262,69,	0,8078,11930,
#Deleted in new
chr11_KI270832v1_alt	206296	206708	chr11_KI270832v1_alt:206296-206708	0	-	206296	206296	8553170	1	412,	0,
#Deleted in new
chr11_KI270902v1_alt	3477	34959	chr11_KI270902v1_alt:3477-34959	0	+	3588	34959	789624	4	160,69,143,155,	0,18702,29434,31327,
#Deleted in new
chr11_KI270902v1_alt	5021	34940	chr11_KI270902v1_alt:5021-34940	0	+	33003	34940	789624	4	116,69,143,136,	0,17158,27890,29783,
#Deleted in new
chr11_KI270902v1_alt	5842	34934	chr11_KI270902v1_alt:5842-34934	0	+	33003	34934	789624	4	215,69,143,130,	0,16337,27069,28962,
#Deleted in new
chr11_KI270902v1_alt	9203	39863	chr11_KI270902v1_alt:9203-39863	0	+	33003	39863	789624	5	503,69,143,194,26,	0,12976,23708,25601,30634,
#Deleted in new
chr11_KI270902v1_alt	11163	11267	chr11_KI270902v1_alt:11163-11267	3	+	11163	11163	8553170	1	104,	0,
#Deleted in new
chr11_KI270902v1_alt	19528	32976	chr11_KI270902v1_alt:19528-32976	0	+	19528	19528	8553170	3	197,69,65,	0,2651,13383,
#Deleted in new
chr11_KI270902v1_alt	22179	39950	chr11_KI270902v1_alt:22179-39950	0	+	22179	39950	789624	4	69,143,194,113,	0,10732,12625,17658,
#Deleted in new
chr11_KI270902v1_alt	22179	74982	chr11_KI270902v1_alt:22179-74982	3	+	22179	73368	789624	21	69,143,194,130,102,109,148,169,138,183,98,232,174,167,83,90,124,117,70,135,1692,	0,10732,12625,17658,21761,25208,25998,27348,29115,33066,33847,34317,34635,40995,44285,47091,48575,49663,49891,50246,51111,
#Deleted in new
chr11_KI270902v1_alt	22179	73662	chr11_KI270902v1_alt:22179-73662	0	+	22179	73450	789624	8	69,143,194,130,102,109,163,372,	0,10732,12625,17658,21761,25208,25998,51111,
#Deleted in new
chr11_KI270902v1_alt	22179	73662	chr11_KI270902v1_alt:22179-73662	0	+	22179	66476	789624	20	69,143,194,130,102,109,151,169,138,183,98,232,174,83,90,124,117,70,135,372,	0,10732,12625,17658,21761,25208,25995,27348,29115,33066,33847,34317,34635,44285,47091,48575,49663,49891,50246,51111,
#Deleted in new
chr11_KI270902v1_alt	22179	39936	chr11_KI270902v1_alt:22179-39936	0	+	22179	22179	8553170	4	69,143,194,99,	0,10732,12625,17658,
#Deleted in new
chr11_KI270902v1_alt	22179	39900	chr11_KI270902v1_alt:22179-39900	0	+	22179	39900	789624	4	69,143,194,63,	0,10732,12625,17658,
#Deleted in new
chr11_KI270902v1_alt	22179	63226	chr11_KI270902v1_alt:22179-63226	0	+	22179	22179	8553170	4	69,123,174,52,	0,34426,34635,40995,
#Deleted in new
chr11_KI270902v1_alt	34960	48220	chr11_KI270902v1_alt:34960-48220	0	+	34960	48220	789624	5	38,130,102,109,43,	0,4877,8980,12427,13217,
#Deleted in new
chr11_KI270902v1_alt	48126	49589	chr11_KI270902v1_alt:48126-49589	0	+	48126	48126	8553170	2	199,62,	0,1401,
#Deleted in new
chr11_KI270902v1_alt	48280	51570	chr11_KI270902v1_alt:48280-51570	0	+	48280	48280	8553170	3	45,169,276,	0,1247,3014,
#Deleted in new
chr11_KI270902v1_alt	58806	71959	chr11_KI270902v1_alt:58806-71959	0	+	58806	58806	8553170	6	162,167,83,90,124,117,	0,4368,7658,10464,11948,13036,
#Deleted in new
chr11_KI270902v1_alt	64068	72109	chr11_KI270902v1_alt:64068-72109	0	+	64068	64068	8553170	6	119,83,90,124,117,39,	0,2396,5202,6686,7774,8002,
#Deleted in new
chr11_KI270902v1_alt	66409	72517	chr11_KI270902v1_alt:66409-72517	0	+	66409	66409	8553170	6	138,90,124,117,70,92,	0,2861,4345,5433,5661,6016,
#Deleted in new
chr11_KI270902v1_alt	66474	69783	chr11_KI270902v1_alt:66474-69783	0	+	66474	66474	8553170	2	73,513,	0,2796,
#Deleted in new
chr11_KI270902v1_alt	69286	71025	chr11_KI270902v1_alt:69286-71025	0	+	69286	69286	8553170	2	74,271,	0,1468,
#Deleted in new
chr11_KI270902v1_alt	69451	73669	chr11_KI270902v1_alt:69451-73669	0	+	69451	69451	8553170	3	2508,70,1244,	0,2619,2974,
#Deleted in new
chr11_KI270902v1_alt	72097	72980	chr11_KI270902v1_alt:72097-72980	0	+	72097	72097	8553170	2	43,555,	0,328,
#Deleted in new
chr11_KI270902v1_alt	75563	106271	chr11_KI270902v1_alt:75563-106271	3	-	76198	106220	8553170	33	813,103,9832,222,168,51,63,144,157,240,186,111,142,152,110,53,250,133,95,162,138,73,105,139,121,123,208,110,91,127,241,63,103,	0,1078,2940,13276,14091,14685,15216,17510,17948,18845,19183,19806,20001,20328,20942,21142,21269,21686,21966,22227,22647,22890,23047,23229,23496,24214,24574,24948,25170,25608,25814,27014,30605,
#Deleted in new
chr11_KI270902v1_alt	75566	106271	chr11_KI270902v1_alt:75566-106271	1	-	76198	106220	789624	34	810,103,2248,761,222,168,51,63,144,157,240,186,111,142,152,110,53,250,133,95,162,138,73,105,139,121,123,208,110,91,127,241,63,103,	0,1075,2937,12008,13273,14088,14682,15213,17507,17945,18842,19180,19803,19998,20325,20939,21139,21266,21683,21963,22224,22644,22887,23044,23226,23493,24211,24571,24945,25167,25605,25811,27011,30602,
#Deleted in new
chr11_KI270902v1_alt	76215	78895	chr11_KI270902v1_alt:76215-78895	0	-	76215	76215	8553170	3	161,103,392,	0,323,2288,
#Deleted in new
chr11_KI270902v1_alt	89469	90299	chr11_KI270902v1_alt:89469-90299	0	-	89469	89469	8553170	2	353,51,	0,779,
#Deleted in new
chr11_KI270902v1_alt	101183	102774	chr11_KI270902v1_alt:101183-102774	0	-	101183	101183	8553170	3	115,241,197,	0,194,1394,
#Deleted in new
chr11_KI270903v1_alt	30570	48447	chr11_KI270903v1_alt:30570-48447	3	-	33044	42353	0	7	3531,124,160,167,139,339,20,	0,3750,4068,4845,9807,11552,17857,
#Deleted in new
chr11_KI270903v1_alt	30577	42463	chr11_KI270903v1_alt:30577-42463	1	-	33044	42353	0	6	3524,124,160,167,139,341,	0,3743,4061,4838,9800,11545,
#Deleted in new
chr11_KI270903v1_alt	34049	35970	chr11_KI270903v1_alt:34049-35970	0	-	34049	34049	8553170	5	52,124,160,167,134,	0,271,589,1366,1787,
#Deleted in new
chr11_KI270903v1_alt	47879	74126	chr11_KI270903v1_alt:47879-74126	0	+	47879	47879	8553170	2	234,336,	0,25911,
#Deleted in new
chr11_KI270903v1_alt	49267	75727	chr11_KI270903v1_alt:49267-75727	3	+	49267	49267	789624	2	328,1937,	0,24523,
#Deleted in new
chr11_KI270903v1_alt	49783	74092	chr11_KI270903v1_alt:49783-74092	0	+	49783	49783	8553170	2	217,302,	0,24007,
#Deleted in new
chr11_KI270903v1_alt	50175	73984	chr11_KI270903v1_alt:50175-73984	0	+	50175	50175	8553170	2	215,194,	0,23615,
#Deleted in new
chr11_KI270903v1_alt	60878	61820	chr11_KI270903v1_alt:60878-61820	3	-	60949	61786	789624	1	942,	0,
#Deleted in new
chr11_KI270903v1_alt	73719	74837	chr11_KI270903v1_alt:73719-74837	3	-	74259	74793	789624	1	1118,	0,
#Deleted in new
chr11_KI270903v1_alt	84117	85016	chr11_KI270903v1_alt:84117-85016	3	-	84221	84938	789624	1	899,	0,
#Deleted in new
chr11_KI270903v1_alt	97514	98873	chr11_KI270903v1_alt:97514-98873	3	-	97961	98828	789624	1	1359,	0,
#Deleted in new
chr11_KI270903v1_alt	97593	98862	chr11_KI270903v1_alt:97593-98862	1	-	97961	98828	789624	5	504,106,64,112,114,	0,561,697,1001,1155,
#Deleted in new
chr11_KI270903v1_alt	106510	107395	chr11_KI270903v1_alt:106510-107395	3	+	106576	107242	789624	1	885,	0,
#Deleted in new
chr11_KI270903v1_alt	106639	107242	chr11_KI270903v1_alt:106639-107242	1	+	106639	107242	789624	2	136,422,	0,181,
#Deleted in new
chr11_KI270903v1_alt	136343	137103	chr11_KI270903v1_alt:136343-137103	3	-	136343	136343	8553170	2	555,33,	0,727,
#Deleted in new
chr11_KI270903v1_alt	139668	141959	chr11_KI270903v1_alt:139668-141959	3	+	139668	139668	5263520	3	190,109,1155,	0,870,1136,
#Deleted in new
chr11_KI270903v1_alt	139960	141958	chr11_KI270903v1_alt:139960-141958	1	+	139960	139960	8553170	1	1998,	0,
#Deleted in new
chr11_KI270903v1_alt	157056	159125	chr11_KI270903v1_alt:157056-159125	3	-	157056	157056	5263520	3	766,109,192,	0,925,1877,
#Deleted in new
chr11_KI270903v1_alt	162074	162834	chr11_KI270903v1_alt:162074-162834	3	+	162074	162074	8553170	2	33,554,	0,206,
#Deleted in new
chr11_KI270903v1_alt	170940	171501	chr11_KI270903v1_alt:170940-171501	3	+	170991	171381	789624	1	561,	0,
#Deleted in new
chr11_KI270903v1_alt	206155	209175	chr11_KI270903v1_alt:206155-209175	0	-	206155	206155	8553170	1	3020,	0,
#Deleted in new
chr11_KI270903v1_alt	206155	209175	chr11_KI270903v1_alt:206155-209175	3	-	209025	209175	789624	1	3020,	0,
#Deleted in new
chr11_KI270903v1_alt	208958	209175	chr11_KI270903v1_alt:208958-209175	0	-	208958	208958	8553170	1	217,	0,
#Deleted in new
chr11_KI270927v1_alt	3477	40374	chr11_KI270927v1_alt:3477-40374	0	+	3588	40374	789624	4	160,69,143,155,	0,18702,34849,36742,
#Deleted in new
chr11_KI270927v1_alt	5021	40355	chr11_KI270927v1_alt:5021-40355	0	+	38418	40355	789624	4	116,69,143,136,	0,17158,33305,35198,
#Deleted in new
chr11_KI270927v1_alt	5842	40349	chr11_KI270927v1_alt:5842-40349	0	+	38418	40349	789624	4	215,69,143,130,	0,16337,32484,34377,
#Deleted in new
chr11_KI270927v1_alt	9203	46270	chr11_KI270927v1_alt:9203-46270	0	+	38418	46270	789624	5	503,69,143,194,26,	0,12976,29123,31016,37041,
#Deleted in new
chr11_KI270927v1_alt	11163	11267	chr11_KI270927v1_alt:11163-11267	3	+	11163	11163	8553170	1	104,	0,
#Deleted in new
chr11_KI270927v1_alt	19528	38391	chr11_KI270927v1_alt:19528-38391	0	+	19528	19528	8553170	3	197,69,65,	0,2651,18798,
#Deleted in new
chr11_KI270927v1_alt	22179	69924	chr11_KI270927v1_alt:22179-69924	0	+	22179	22179	8553170	4	69,123,174,52,	0,41124,41333,47693,
#Deleted in new
chr11_KI270927v1_alt	22179	80510	chr11_KI270927v1_alt:22179-80510	0	+	22179	73174	789624	20	69,143,194,130,102,109,151,169,138,183,98,232,174,83,90,124,117,70,135,372,	0,16147,18040,24065,28465,31906,32693,34046,35813,39764,40545,41015,41333,50983,53789,55273,56361,56589,57094,57959,
#Deleted in new
chr11_KI270927v1_alt	22179	46357	chr11_KI270927v1_alt:22179-46357	0	+	22179	46357	789624	4	69,143,194,113,	0,16147,18040,24065,
#Deleted in new
chr11_KI270927v1_alt	22179	80510	chr11_KI270927v1_alt:22179-80510	0	+	22179	80298	789624	8	69,143,194,130,102,109,163,372,	0,16147,18040,24065,28465,31906,32696,57959,
#Deleted in new
chr11_KI270927v1_alt	22179	46307	chr11_KI270927v1_alt:22179-46307	0	+	22179	46307	789624	4	69,143,194,63,	0,16147,18040,24065,
#Deleted in new
chr11_KI270927v1_alt	22179	81830	chr11_KI270927v1_alt:22179-81830	1	+	22179	80216	789624	21	69,143,194,130,102,109,148,169,138,183,98,232,174,167,83,90,124,117,70,135,1692,	0,16147,18040,24065,28465,31906,32696,34046,35813,39764,40545,41015,41333,47693,50983,53789,55273,56361,56589,57094,57959,
#Deleted in new
chr11_KI270927v1_alt	22179	46343	chr11_KI270927v1_alt:22179-46343	0	+	22179	22179	8553170	4	69,143,194,99,	0,16147,18040,24065,
#Deleted in new
chr11_KI270927v1_alt	40375	54918	chr11_KI270927v1_alt:40375-54918	0	+	46251	54918	789624	5	38,130,102,109,43,	0,5869,10269,13710,14500,
#Deleted in new
chr11_KI270927v1_alt	54824	56287	chr11_KI270927v1_alt:54824-56287	0	+	54824	54824	8553170	2	199,62,	0,1401,
#Deleted in new
chr11_KI270927v1_alt	54978	58268	chr11_KI270927v1_alt:54978-58268	0	+	54978	54978	8553170	3	45,169,276,	0,1247,3014,
#Deleted in new
chr11_KI270927v1_alt	65504	78657	chr11_KI270927v1_alt:65504-78657	0	+	65504	65504	8553170	6	162,167,83,90,124,117,	0,4368,7658,10464,11948,13036,
#Deleted in new
chr11_KI270927v1_alt	70766	78807	chr11_KI270927v1_alt:70766-78807	0	+	70766	70766	8553170	6	119,83,90,124,117,39,	0,2396,5202,6686,7774,8002,
#Deleted in new
chr11_KI270927v1_alt	73107	79365	chr11_KI270927v1_alt:73107-79365	0	+	73107	73107	8553170	6	138,90,124,117,70,92,	0,2861,4345,5433,5661,6166,
#Deleted in new
chr11_KI270927v1_alt	73172	76481	chr11_KI270927v1_alt:73172-76481	0	+	73172	73172	8553170	2	73,513,	0,2796,
#Deleted in new
chr11_KI270927v1_alt	75984	77723	chr11_KI270927v1_alt:75984-77723	0	+	75984	75984	8553170	2	74,271,	0,1468,
#Deleted in new
chr11_KI270927v1_alt	76149	80517	chr11_KI270927v1_alt:76149-80517	0	+	76149	76149	8553170	3	2508,70,1244,	0,2619,3124,
#Deleted in new
chr11_KI270927v1_alt	78795	79828	chr11_KI270927v1_alt:78795-79828	2	+	78795	78795	8553170	2	43,555,	0,478,
#Deleted in new
chr11_KI270927v1_alt	82411	111099	chr11_KI270927v1_alt:82411-111099	3	-	83046	111048	8553170	33	813,103,7812,222,168,51,63,144,157,240,186,111,142,152,110,53,250,133,95,162,138,73,105,139,121,123,208,110,91,127,241,63,103,	0,1078,2940,11256,12071,12665,13196,15490,15928,16825,17163,17786,17981,18308,18922,19122,19249,19666,19946,20207,20627,20870,21027,21209,21476,22194,22554,22928,23150,23588,23794,24994,28585,
#Deleted in new
chr11_KI270927v1_alt	82414	111099	chr11_KI270927v1_alt:82414-111099	1	-	83046	111048	789624	34	810,103,2248,761,222,168,51,63,144,157,240,186,111,142,152,110,53,250,133,95,162,138,73,105,139,121,123,208,110,91,127,241,63,103,	0,1075,2937,9988,11253,12068,12662,13193,15487,15925,16822,17160,17783,17978,18305,18919,19119,19246,19663,19943,20204,20624,20867,21024,21206,21473,22191,22551,22925,23147,23585,23791,24991,28582,
#Deleted in new
chr11_KI270927v1_alt	83063	85743	chr11_KI270927v1_alt:83063-85743	0	-	83063	83063	8553170	3	161,103,392,	0,323,2288,
#Deleted in new
chr11_KI270927v1_alt	94297	95127	chr11_KI270927v1_alt:94297-95127	0	-	94297	94297	8553170	2	353,51,	0,779,
#Deleted in new
chr11_KI270927v1_alt	106011	107602	chr11_KI270927v1_alt:106011-107602	0	-	106011	106011	8553170	3	115,241,197,	0,194,1394,
#Deleted in new
chr11_KI270927v1_alt	124272	130142	chr11_KI270927v1_alt:124272-130142	3	+	124272	124272	8553170	4	83,221,154,636,	0,1743,4359,5234,
#Deleted in new
chr11_KI270927v1_alt	127003	130142	chr11_KI270927v1_alt:127003-130142	1	+	127003	127003	8553170	1	3139,	0,
#Deleted in new
chr11_KI270927v1_alt	149267	178812	chr11_KI270927v1_alt:149267-178812	3	+	149294	178656	789624	49	103,271,115,91,110,211,126,118,139,111,70,138,165,95,127,256,53,101,152,139,111,180,240,157,132,148,44,204,18,1854,198,224,175,248,184,229,179,70,101,32,178,105,41,123,99,129,40,127,376,	0,776,2723,3221,3392,3581,4783,5406,5602,5999,6198,6546,6774,7412,7713,8189,8675,8866,9367,9856,10869,11061,11372,12570,13003,13825,15462,15907,16597,17205,19790,20256,20789,21450,22307,22814,23766,24336,24544,24889,26119,26683,27037,27206,27581,28314,28680,28934,29169,
#Deleted in new
chr11_KI270927v1_alt	149294	168046	chr11_KI270927v1_alt:149294-168046	1	+	149294	168046	789624	32	76,271,115,91,110,211,126,118,139,111,70,138,165,95,127,256,53,101,152,139,111,180,240,157,132,148,44,204,18,875,426,138,	0,749,2696,3194,3365,3554,4756,5379,5575,5972,6171,6519,6747,7385,7686,8162,8648,8839,9340,9829,10842,11034,11345,12543,12976,13798,15435,15880,16570,17178,18155,18614,
#Deleted in new
chr11_KI270927v1_alt	170755	171757	chr11_KI270927v1_alt:170755-171757	1	+	170755	171757	789624	2	210,183,	0,819,
#Deleted in new
chr11_KN196481v1_fix	15933	16230	chr11_KN196481v1_fix:15933-16230	3	+	15933	15933	8553170	1	297,	0,
#Deleted in new
chr11_KN196481v1_fix	16159	16255	chr11_KN196481v1_fix:16159-16255	3	+	16159	16159	8553170	1	96,	0,
#Deleted in new
chr11_KN196481v1_fix	16423	18204	chr11_KN196481v1_fix:16423-18204	0	-	16423	16423	8553170	2	147,406,	0,1375,
#Deleted in new
chr11_KN196481v1_fix	17794	19604	chr11_KN196481v1_fix:17794-19604	3	-	17794	17794	8553170	2	1082,277,	0,1533,
#Deleted in new
chr11_KN196481v1_fix	19741	37345	chr11_KN196481v1_fix:19741-37345	3	+	19797	37198	789624	11	176,164,99,67,63,65,106,31,90,133,208,	0,288,869,12622,13079,13797,14007,15090,16852,17165,17396,
#Deleted in new
chr11_KN196481v1_fix	19744	33862	chr11_KN196481v1_fix:19744-33862	0	+	19744	19744	8553170	6	449,99,67,91,65,114,	0,866,12619,13076,13794,14004,
#Deleted in new
chr11_KN196481v1_fix	19754	37241	chr11_KN196481v1_fix:19754-37241	0	+	19797	23276	789624	11	163,164,99,213,67,91,65,106,90,133,104,	0,275,856,3458,12609,13066,13784,13994,16839,17152,17383,
#Deleted in new
chr11_KN196481v1_fix	19767	37241	chr11_KN196481v1_fix:19767-37241	0	+	19797	33582	789624	11	150,164,99,67,91,65,106,31,90,152,104,	0,262,843,12596,13053,13771,13981,15064,16826,17120,17370,
#Deleted in new
chr11_KN196481v1_fix	19774	20891	chr11_KN196481v1_fix:19774-20891	0	+	19774	19774	8553170	3	143,164,281,	0,255,836,
#Deleted in new
chr11_KN196481v1_fix	20640	35946	chr11_KN196481v1_fix:20640-35946	0	+	20640	20640	8553170	7	69,67,91,65,106,31,133,	0,11723,12180,12898,13108,14191,15173,
#Deleted in new
chr11_KN196481v1_fix	24611	25046	chr11_KN196481v1_fix:24611-25046	7	-	24611	24611	16724991	1	435,	0,
#Deleted in new
chr11_KN196481v1_fix	25341	26493	chr11_KN196481v1_fix:25341-26493	3	-	25341	25341	8553170	2	108,415,	0,737,
#Deleted in new
chr11_KN196481v1_fix	27326	27534	chr11_KN196481v1_fix:27326-27534	7	-	27326	27326	16724991	1	208,	0,
#Deleted in new
chr11_KN196481v1_fix	31133	33777	chr11_KN196481v1_fix:31133-33777	0	+	31133	31133	8553170	4	1297,91,65,29,	0,1687,2405,2615,
#Deleted in new
chr11_KN196481v1_fix	32806	36692	chr11_KN196481v1_fix:32806-36692	0	+	32806	32806	8553170	4	105,316,31,99,	0,732,2025,3787,
#Deleted in new
chr11_KN196481v1_fix	33558	37391	chr11_KN196481v1_fix:33558-37391	0	+	33558	33558	8553170	4	1304,90,133,254,	0,3035,3348,3579,
#Deleted in new
chr11_KN196481v1_fix	35665	37028	chr11_KN196481v1_fix:35665-37028	0	+	35665	35665	8553170	2	1018,122,	0,1241,
#Deleted in new
chr11_KN196481v1_fix	37311	40290	chr11_KN196481v1_fix:37311-40290	3	-	37444	39884	0	5	47,99,184,96,409,	0,129,1650,2246,2570,
#Deleted in new
chr11_KN196481v1_fix	37311	40278	chr11_KN196481v1_fix:37311-40278	0	-	39012	39884	789624	5	47,99,72,96,397,	0,129,1650,2246,2570,
#Deleted in new
chr11_KN196481v1_fix	37311	39930	chr11_KN196481v1_fix:37311-39930	0	-	39536	39884	789624	5	47,99,184,129,49,	0,129,1650,2213,2570,
#Deleted in new
chr11_KN196481v1_fix	37325	40291	chr11_KN196481v1_fix:37325-40291	0	-	37325	37325	8553170	3	33,99,1330,	0,115,1636,
#Deleted in new
chr11_KN196481v1_fix	38960	40266	chr11_KN196481v1_fix:38960-40266	0	-	38960	38960	8553170	2	693,385,	0,921,
#Deleted in new
chr11_KN196481v1_fix	39297	39644	chr11_KN196481v1_fix:39297-39644	0	-	39297	39297	8553170	2	102,87,	0,260,
#Deleted in new
chr11_KN196481v1_fix	40031	45734	chr11_KN196481v1_fix:40031-45734	1	+	40395	44999	0	5	539,175,104,127,814,	0,711,1718,3328,4889,
#Deleted in new
chr11_KN196481v1_fix	40362	41103	chr11_KN196481v1_fix:40362-41103	0	+	40362	40362	8553170	2	208,361,	0,380,
#Deleted in new
chr11_KN196481v1_fix	40365	45272	chr11_KN196481v1_fix:40365-45272	1	+	40395	44999	789624	5	205,175,104,13,352,	0,377,1384,3108,4555,
#Deleted in new
chr11_KN196481v1_fix	40365	47054	chr11_KN196481v1_fix:40365-47054	3	+	40395	46649	789624	5	205,175,104,127,598,	0,377,1384,2994,6091,
#Deleted in new
chr11_KN196481v1_fix	40365	45021	chr11_KN196481v1_fix:40365-45021	1	+	40395	44999	789624	5	205,46,104,127,101,	0,377,1384,2994,4555,
#Deleted in new
chr11_KN196481v1_fix	40365	45272	chr11_KN196481v1_fix:40365-45272	0	+	40365	40365	8553170	4	552,104,127,352,	0,1384,2994,4555,
#Deleted in new
chr11_KN196481v1_fix	40365	45265	chr11_KN196481v1_fix:40365-45265	1	+	40395	44999	0	5	205,68,49,127,345,	0,377,1439,2994,4555,
#Deleted in new
chr11_KN196481v1_fix	40365	45242	chr11_KN196481v1_fix:40365-45242	1	+	40395	44999	789624	3	205,127,322,	0,2994,4555,
#Deleted in new
chr11_KN196481v1_fix	40365	42349	chr11_KN196481v1_fix:40365-42349	0	+	40365	40365	8553170	3	205,175,600,	0,377,1384,
#Deleted in new
chr11_KN196481v1_fix	40389	44994	chr11_KN196481v1_fix:40389-44994	0	+	40395	40921	789624	5	181,282,104,127,74,	0,353,1360,2970,4531,
#Deleted in new
chr11_KN196481v1_fix	40394	45259	chr11_KN196481v1_fix:40394-45259	0	+	40395	43390	789624	4	176,175,127,339,	0,348,2965,4526,
#Deleted in new
chr11_KN196481v1_fix	40543	40612	chr11_KN196481v1_fix:40543-40612	3	+	40543	40543	5263520	1	69,	0,
#Deleted in new
chr11_KN196481v1_fix	40991	45271	chr11_KN196481v1_fix:40991-45271	0	+	40991	40991	8553170	3	862,127,351,	0,2368,3929,
#Deleted in new
chr11_KN196481v1_fix	41916	45274	chr11_KN196481v1_fix:41916-45274	0	+	41916	41916	8553170	2	1570,354,	0,3004,
#Deleted in new
chr11_KN196481v1_fix	43367	44882	chr11_KN196481v1_fix:43367-44882	0	+	43367	43367	8553170	2	119,273,	0,1242,
#Deleted in new
chr11_KN196481v1_fix	45952	52505	chr11_KN196481v1_fix:45952-52505	1	-	46509	50968	789624	11	724,139,66,114,86,159,244,233,343,188,58,	0,838,1339,1614,2250,2584,3275,3840,4868,6194,6495,
#Deleted in new
chr11_KN196481v1_fix	45952	52505	chr11_KN196481v1_fix:45952-52505	1	-	46509	50968	789624	10	724,139,114,86,159,244,233,343,504,58,	0,838,1614,2250,2584,3275,3840,4868,5878,6495,
#Deleted in new
chr11_KN196481v1_fix	45952	52505	chr11_KN196481v1_fix:45952-52505	1	-	46509	50968	789624	11	724,139,66,114,86,159,244,233,343,188,58,	0,838,1339,1614,2250,2584,3275,3840,4868,6194,6495,
#Deleted in new
chr11_KN196481v1_fix	45952	52505	chr11_KN196481v1_fix:45952-52505	3	-	46509	50968	789624	10	724,139,114,86,159,244,233,343,504,58,	0,838,1614,2250,2584,3275,3840,4868,5878,6495,
#Deleted in new
chr11_KN196481v1_fix	65786	67092	chr11_KN196481v1_fix:65786-67092	3	+	65786	65786	8553170	2	558,109,	0,1197,
#Deleted in new
chr11_KN196481v1_fix	65787	78736	chr11_KN196481v1_fix:65787-78736	1	-	67191	77759	789624	26	1466,51,51,241,85,134,123,88,173,186,80,61,139,188,133,83,135,193,116,182,77,155,79,94,98,118,	0,1592,2228,2373,3545,3758,4059,4287,4525,4829,5367,5588,6846,7249,7630,7901,8106,8448,9932,10305,10795,10996,11304,11561,11881,12831,
#Deleted in new
chr11_KN196481v1_fix	65789	78711	chr11_KN196481v1_fix:65789-78711	1	-	66712	77759	789624	18	965,186,80,61,139,188,133,83,135,193,116,182,77,155,79,94,98,93,	0,4827,5365,5586,6844,7247,7628,7899,8104,8446,9930,10303,10793,10994,11302,11559,11879,12829,
#Deleted in new
chr11_KN196481v1_fix	65789	78793	chr11_KN196481v1_fix:65789-78793	3	-	67066	77759	789624	8	1035,49,17,155,79,94,98,42,	0,1236,10853,10994,11302,11559,11879,12962,
#Deleted in new
chr11_KN196481v1_fix	65790	78756	chr11_KN196481v1_fix:65790-78756	1	-	67191	77759	789624	25	1463,51,51,241,85,134,123,88,173,80,61,139,188,133,83,135,193,116,182,77,155,79,94,98,138,	0,1589,2225,2370,3542,3755,4056,4284,4522,5364,5585,6843,7246,7627,7898,8103,8445,9929,10302,10792,10993,11301,11558,11878,12828,
#Deleted in new
chr11_KN196481v1_fix	66712	78736	chr11_KN196481v1_fix:66712-78736	1	-	66712	77759	789624	19	37,8,186,80,61,139,188,133,83,135,193,116,182,77,155,79,94,98,118,	0,1630,3904,4442,4663,5921,6324,6705,6976,7181,7523,9007,9380,9870,10071,10379,10636,10956,11906,
#Deleted in new
chr11_KN196481v1_fix	66909	78733	chr11_KN196481v1_fix:66909-78733	1	-	67191	77759	789624	26	344,51,51,241,85,134,123,88,173,80,61,139,188,133,83,135,193,116,182,77,155,79,94,98,140,115,	0,470,1106,1251,2423,2636,2937,3165,3403,4245,4466,5724,6127,6508,6779,6984,7326,8810,9183,9673,9874,10182,10439,10759,10968,11709,
#Deleted in new
chr11_KN196481v1_fix	68768	69705	chr11_KN196481v1_fix:68768-69705	0	-	68768	68768	8553170	2	649,160,	0,777,
#Deleted in new
chr11_KN196481v1_fix	69955	70424	chr11_KN196481v1_fix:69955-70424	0	-	69955	69955	8553170	2	207,112,	0,357,
#Deleted in new
chr11_KN196481v1_fix	69958	78738	chr11_KN196481v1_fix:69958-78738	0	-	77144	77759	789624	19	11,88,173,353,80,61,139,188,133,83,135,193,116,182,77,155,79,98,120,	0,116,354,658,1196,1417,2675,3078,3459,3730,3935,4277,5761,6134,6624,6825,7133,7710,8660,
#Deleted in new
chr11_KN196481v1_fix	70638	78449	chr11_KN196481v1_fix:70638-78449	0	-	70638	77759	789624	17	164,80,61,139,188,133,83,135,193,116,182,77,155,79,94,98,46,	0,516,737,1995,2398,2779,3050,3255,3597,5081,5454,5944,6145,6453,6710,7030,7765,
#Deleted in new
chr11_KN196481v1_fix	73971	77017	chr11_KN196481v1_fix:73971-77017	0	-	73971	73971	8553170	4	1864,182,77,234,	0,2121,2611,2812,
#Deleted in new
chr11_KN196481v1_fix	76097	78704	chr11_KN196481v1_fix:76097-78704	0	-	76097	77759	789624	7	177,77,155,79,94,98,31,	0,485,686,994,1251,1571,2576,
#Deleted in new
chr11_KN196481v1_fix	76135	78623	chr11_KN196481v1_fix:76135-78623	0	-	76135	77759	789624	7	139,77,155,79,94,98,220,	0,447,648,956,1213,1533,2268,
#Deleted in new
chr11_KN196481v1_fix	76183	78801	chr11_KN196481v1_fix:76183-78801	0	-	77144	77759	789624	6	91,77,155,79,98,50,	0,399,600,908,1485,2568,
#Deleted in new
chr11_KN196481v1_fix	76614	78736	chr11_KN196481v1_fix:76614-78736	0	-	76614	77759	789624	6	45,155,79,94,98,111,	0,169,477,734,1054,2011,
#Deleted in new
chr11_KN196481v1_fix	76621	78509	chr11_KN196481v1_fix:76621-78509	0	-	76621	76621	8553170	5	317,79,94,98,106,	0,470,727,1047,1782,
#Deleted in new
chr11_KN196481v1_fix	76631	78774	chr11_KN196481v1_fix:76631-78774	0	-	76631	77759	789624	6	28,155,79,94,98,175,	0,152,460,717,1037,1968,
#Deleted in new
chr11_KN196481v1_fix	76753	78711	chr11_KN196481v1_fix:76753-78711	0	-	76753	76753	8553170	5	185,79,94,98,93,	0,338,595,915,1865,
#Deleted in new
chr11_KN196481v1_fix	76800	78733	chr11_KN196481v1_fix:76800-78733	0	-	76800	76800	8553170	3	138,351,60,	0,291,1873,
#Deleted in new
chr11_KN196481v1_fix	76894	78728	chr11_KN196481v1_fix:76894-78728	0	-	76894	77759	789624	6	44,79,94,98,127,110,	0,197,454,774,983,1724,
#Deleted in new
chr11_KN196481v1_fix	76926	78741	chr11_KN196481v1_fix:76926-78741	0	-	76926	77759	789624	6	12,79,94,98,140,68,	0,165,422,742,951,1747,
#Deleted in new
chr11_KN196481v1_fix	77087	78733	chr11_KN196481v1_fix:77087-78733	0	-	77087	77087	8553170	3	355,98,115,	0,581,1531,
#Deleted in new
chr11_KN196481v1_fix	86861	87276	chr11_KN196481v1_fix:86861-87276	3	-	86861	86861	8553170	1	415,	0,
#Deleted in new
chr11_KN196481v1_fix	88972	89297	chr11_KN196481v1_fix:88972-89297	3	-	88972	88972	8553170	1	325,	0,
#Deleted in new
chr11_KN196481v1_fix	89290	103577	chr11_KN196481v1_fix:89290-103577	3	+	89422	103222	789624	16	319,149,136,164,248,202,152,187,147,189,162,140,203,172,223,520,	0,1504,1750,2542,3904,5506,6108,9205,9809,10186,10481,10873,11103,11437,13400,13767,
#Deleted in new
chr11_KN196481v1_fix	89419	103566	chr11_KN196481v1_fix:89419-103566	1	+	89667	103222	789624	16	382,172,136,164,248,202,152,187,147,189,162,140,203,172,223,509,	0,1352,1621,2413,3775,5377,5979,9076,9680,10057,10352,10744,10974,11308,13271,13638,
#Deleted in new
chr11_KN196481v1_fix	89421	103563	chr11_KN196481v1_fix:89421-103563	0	+	89421	89421	8553170	13	190,147,164,248,202,152,187,147,189,825,172,223,506,	0,1375,2411,3773,5375,5977,9074,9678,10055,10350,11306,13269,13636,
#Deleted in new
chr11_KN196481v1_fix	91131	103563	chr11_KN196481v1_fix:91131-103563	1	+	99536	103484	789624	15	45,164,248,202,152,187,147,189,162,140,203,172,223,108,397,	0,701,2063,3665,4267,7364,7968,8345,8640,9032,9262,9596,11559,11926,12035,
#Deleted in new
chr11_KN196481v1_fix	91151	92383	chr11_KN196481v1_fix:91151-92383	0	+	91151	91151	8553170	2	25,551,	0,681,
#Deleted in new
chr11_KN196481v1_fix	93630	98527	chr11_KN196481v1_fix:93630-98527	0	+	93630	93630	8553170	2	1920,32,	0,4865,
#Deleted in new
chr11_KN196481v1_fix	95420	99246	chr11_KN196481v1_fix:95420-99246	0	+	95420	99246	789624	3	130,265,147,	0,2997,3679,
#Deleted in new
chr11_KN196481v1_fix	98618	99928	chr11_KN196481v1_fix:98618-99928	0	+	98618	98618	8553170	4	64,147,189,185,	0,481,858,1125,
#Deleted in new
chr11_KN196481v1_fix	100780	103564	chr11_KN196481v1_fix:100780-103564	0	+	100780	100780	8553170	2	119,507,	0,2277,
#Deleted in new
chr11_KN538368v1_alt	4564	5275	chr11_KN538368v1_alt:4564-5275	7	+	4564	4564	16724991	1	711,	0,
#Deleted in new
chr11_KN538368v1_alt	5053	5302	chr11_KN538368v1_alt:5053-5302	1	-	5053	5302	789624	1	249,	0,
#Deleted in new
chr11_KN538368v1_alt	5053	5302	chr11_KN538368v1_alt:5053-5302	3	-	5053	5302	789624	1	249,	0,
#Deleted in new
chr11_KN538368v1_alt	16772	17841	chr11_KN538368v1_alt:16772-17841	3	-	16841	17810	789624	1	1069,	0,
#Deleted in new
chr11_KN538368v1_alt	55807	61828	chr11_KN538368v1_alt:55807-61828	3	-	56026	56962	789624	2	1176,17,	0,6004,
#Deleted in new
chr11_KN538368v1_alt	56026	56962	chr11_KN538368v1_alt:56026-56962	1	-	56026	56962	789624	1	936,	0,
#Deleted in new
chr11_KN538368v1_alt	79693	80620	chr11_KN538368v1_alt:79693-80620	7	+	79693	79693	16724991	1	927,	0,
#Deleted in new
chr11_KN538368v1_alt	120175	120273	chr11_KN538368v1_alt:120175-120273	3	-	120175	120175	8553170	1	98,	0,
#Deleted in new
chr11_KN538368v1_alt	152123	152853	chr11_KN538368v1_alt:152123-152853	7	-	152123	152123	16724991	2	480,249,	0,481,
#Deleted in new
chr11_KN538368v1_alt	155585	162262	chr11_KN538368v1_alt:155585-162262	1	-	158711	159656	789624	4	5924,29,27,72,	0,6269,6395,6605,
#Deleted in new
chr11_KN538368v1_alt	155585	162262	chr11_KN538368v1_alt:155585-162262	3	-	158711	159656	789624	4	5924,81,27,72,	0,6217,6395,6605,
#Deleted in new
chr11_KN538368v1_alt	158711	159656	chr11_KN538368v1_alt:158711-159656	1	-	158711	159656	789624	1	945,	0,
#Deleted in new
chr11_KN538368v1_alt	168164	172702	chr11_KN538368v1_alt:168164-172702	3	-	169569	170514	789624	2	2528,122,	0,4416,
#Deleted in new
chr11_KN538368v1_alt	169527	170588	chr11_KN538368v1_alt:169527-170588	1	-	169569	170514	789624	1	1061,	0,
#Deleted in new
chr11_KN538368v1_alt	190417	194651	chr11_KN538368v1_alt:190417-194651	3	-	190637	194489	0	2	1899,451,	0,3783,
#Deleted in new
chr11_KN538368v1_alt	194292	196420	chr11_KN538368v1_alt:194292-196420	0	-	194292	194489	789624	2	242,181,	0,1947,
#Deleted in new
chr11_KQ090022v1_fix	107797	108262	chr11_KQ090022v1_fix:107797-108262	7	-	107797	107797	16724991	1	465,	0,
#Deleted in new
chr11_KQ090022v1_fix	138261	139016	chr11_KQ090022v1_fix:138261-139016	7	-	138261	138261	16724991	1	755,	0,
#Deleted in new
chr11_KQ090022v1_fix	171956	179942	chr11_KQ090022v1_fix:171956-179942	3	-	171956	171956	8553170	5	232,127,172,114,130,	0,388,3030,6406,7856,
#Deleted in new
chr11_KQ759759v1_fix	277	24163	chr11_KQ759759v1_fix:277-24163	3	-	912	24112	789624	33	813,103,3009,222,168,51,63,144,157,240,186,111,142,152,110,53,250,133,95,162,138,73,105,139,121,123,208,110,91,127,241,63,103,	0,1078,2941,6454,7269,7863,8394,10688,11126,12023,12361,12984,13179,13506,14120,14320,14447,14864,15144,15405,15825,16068,16225,16407,16674,17392,17752,18126,18348,18786,18992,20192,23783,
#Deleted in new
chr11_KQ759759v1_fix	929	3610	chr11_KQ759759v1_fix:929-3610	0	-	929	3610	8553170	3	161,103,392,	0,323,2289,
#Deleted in new
chr11_KQ759759v1_fix	7361	8191	chr11_KQ759759v1_fix:7361-8191	0	-	7418	8191	8553170	2	353,51,	0,779,
#Deleted in new
chr11_KQ759759v1_fix	19075	20666	chr11_KQ759759v1_fix:19075-20666	0	-	19075	20656	8553170	3	115,241,197,	0,194,1394,
#Deleted in new
chr11_KQ759759v1_fix	37332	43202	chr11_KQ759759v1_fix:37332-43202	3	+	37332	37332	8553170	4	83,221,154,636,	0,1743,4359,5234,
#Deleted in new
chr11_KQ759759v1_fix	40063	43202	chr11_KQ759759v1_fix:40063-43202	1	+	40063	40063	8553170	1	3139,	0,
#Deleted in new
chr11_KQ759759v1_fix	62474	99822	chr11_KQ759759v1_fix:62474-99822	1	+	62474	99822	8553170	48	76,271,115,91,110,211,126,118,139,111,70,138,165,95,127,256,53,101,152,139,111,180,240,157,132,148,44,204,8930,208,224,175,248,184,229,179,70,101,32,178,105,41,123,99,129,40,127,217,	0,749,2696,3194,3365,3554,5333,5956,6152,6549,6748,7096,7324,7962,8263,8739,9225,9416,9917,10406,11419,11611,11922,13120,13553,14375,16012,16457,17737,27746,28222,28755,29416,30273,30780,31732,32302,32510,32855,34081,34645,34999,35168,35543,36276,36642,36896,37131,
#Deleted in new
chr11_KQ759759v1_fix	62474	99822	chr11_KQ759759v1_fix:62474-99822	1	+	62474	99822	8553170	49	76,271,115,91,110,211,126,118,139,111,70,138,165,95,127,256,53,101,152,139,111,180,240,157,132,148,44,204,726,1146,198,224,175,248,184,229,179,70,101,32,178,105,41,123,99,129,40,127,217,	0,749,2696,3194,3365,3554,5333,5956,6152,6549,6748,7096,7324,7962,8263,8739,9225,9416,9917,10406,11419,11611,11922,13120,13553,14375,16012,16457,17737,25879,27756,28222,28755,29416,30273,30780,31732,32302,32510,32855,34081,34645,34999,35168,35543,36276,36642,36896,37131,
#Deleted in new
chr11_KQ759759v1_fix	62474	89219	chr11_KQ759759v1_fix:62474-89219	1	+	62474	89219	8553170	32	76,271,115,91,110,211,126,118,139,111,70,138,165,95,127,256,53,101,152,139,111,180,240,157,132,148,44,204,735,158,525,39,	0,749,2696,3194,3365,3554,5333,5956,6152,6549,6748,7096,7324,7962,8263,8739,9225,9416,9917,10406,11419,11611,11922,13120,13553,14375,16012,16457,17737,24232,26148,26706,
#Deleted in new
chr11_KQ759759v1_fix	62474	89219	chr11_KQ759759v1_fix:62474-89219	1	+	62474	89219	8553170	32	76,271,115,91,110,211,126,118,139,111,70,138,165,95,127,256,53,101,152,139,111,180,240,157,132,148,44,204,735,158,525,39,	0,749,2696,3194,3365,3554,5333,5956,6152,6549,6748,7096,7324,7962,8263,8739,9225,9416,9917,10406,11419,11611,11922,13120,13553,14375,16012,16457,17737,24232,26148,26706,
#Deleted in new
chr11_KQ759759v1_fix	62474	99822	chr11_KQ759759v1_fix:62474-99822	1	+	62474	99822	789624	48	76,271,115,91,110,211,126,118,139,111,70,138,165,95,127,256,53,101,152,139,111,180,240,157,132,148,44,204,8930,208,224,175,248,184,229,179,70,101,32,178,105,41,123,99,129,40,127,217,	0,749,2696,3194,3365,3554,5333,5956,6152,6549,6748,7096,7324,7962,8263,8739,9225,9416,9917,10406,11419,11611,11922,13120,13553,14375,16012,16457,17737,27746,28222,28755,29416,30273,30780,31732,32302,32510,32855,34081,34645,34999,35168,35543,36276,36642,36896,37131,
#Deleted in new
chr11_KQ759759v1_fix	62474	99822	chr11_KQ759759v1_fix:62474-99822	3	+	62474	99822	8553170	49	76,271,115,91,110,211,126,118,139,111,70,138,165,95,127,256,53,101,152,139,111,180,240,157,132,148,44,204,726,1146,198,224,175,248,184,229,179,70,101,32,178,105,41,123,99,129,40,127,217,	0,749,2696,3194,3365,3554,5333,5956,6152,6549,6748,7096,7324,7962,8263,8739,9225,9416,9917,10406,11419,11611,11922,13120,13553,14375,16012,16457,17737,25879,27756,28222,28755,29416,30273,30780,31732,32302,32510,32855,34081,34645,34999,35168,35543,36276,36642,36896,37131,
#Deleted in new
chr11_KQ759759v1_fix	147367	190563	chr11_KQ759759v1_fix:147367-190563	3	+	147414	190127	0	49	120,78,60,262,115,91,110,214,126,118,139,111,70,138,165,95,127,256,53,101,152,139,114,180,240,157,129,163,44,189,10371,200,175,251,184,268,179,88,104,32,172,102,38,123,99,120,70,115,701,	0,2669,3584,3964,4589,5012,5939,6163,6464,7359,7679,9934,10540,10699,10919,14486,16553,16939,17275,18208,18571,18985,19288,19511,20501,21149,22079,22411,23196,23328,24212,34840,35542,36167,36544,37069,37933,38445,38674,38934,39525,39960,40325,40931,41144,41428,41752,41912,42495,
#Deleted in new
chr11_KV766195v1_fix	23100	24163	chr11_KV766195v1_fix:23100-24163	3	-	23199	24129	789624	1	1063,	0,
#Deleted in new
chr11_KV766195v1_fix	60425	61323	chr11_KV766195v1_fix:60425-61323	7	+	60425	60425	16724991	1	898,	0,
#Deleted in new
chr11_KV766195v1_fix	95035	95935	chr11_KV766195v1_fix:95035-95935	7	-	95035	95035	16724991	1	900,	0,
#Deleted in new
chr11_KZ559108v1_fix	22723	274566	chr11_KZ559108v1_fix:22723-274566	7	+	22723	22723	16724991	7	170,861,250,85,23,98,676,	0,17500,225248,233400,249080,249963,251167,
#Deleted in new
chr11_KZ559108v1_fix	24995	274568	chr11_KZ559108v1_fix:24995-274568	5	+	24995	24995	16724991	7	201,861,250,85,23,98,678,	0,15228,222976,231128,246808,247691,248895,
#Deleted in new
chr11_KZ559108v1_fix	24995	274566	chr11_KZ559108v1_fix:24995-274566	5	+	24995	24995	16724991	7	201,861,250,85,23,98,676,	0,15228,222976,231128,246808,247691,248895,
#Deleted in new
chr11_KZ559108v1_fix	281926	289702	chr11_KZ559108v1_fix:281926-289702	7	+	281926	281926	16724991	5	132,177,306,120,60,	0,2333,4847,5201,7716,
#Deleted in new
chr11_KZ559108v1_fix	288987	290873	chr11_KZ559108v1_fix:288987-290873	7	-	288987	288987	16724991	3	106,93,405,	0,785,1481,
#Deleted in new
chr11_KZ559108v1_fix	297288	303469	chr11_KZ559108v1_fix:297288-303469	7	-	297288	297288	16724991	10	495,96,60,57,54,87,36,24,33,411,	0,1572,2224,2775,3403,3493,3697,4941,5026,5770,
#Deleted in new
chr11_KZ559109v1_fix	22	6782	chr11_KZ559109v1_fix:22-6782	1	-	755	5825	0	4	1594,107,614,129,	0,3396,5214,6631,
#Deleted in new
chr11_KZ559109v1_fix	23	6795	chr11_KZ559109v1_fix:23-6795	1	-	755	5825	0	4	1593,107,618,142,	0,3395,5213,6630,
#Deleted in new
chr11_KZ559109v1_fix	23	6615	chr11_KZ559109v1_fix:23-6615	1	-	755	5900	8553170	3	1593,107,1379,	0,3395,5213,
#Deleted in new
chr11_KZ559109v1_fix	52	6841	chr11_KZ559109v1_fix:52-6841	3	-	755	6777	0	4	1564,107,618,83,	0,3366,5184,6706,
#Deleted in new
chr11_KZ559109v1_fix	3391	6594	chr11_KZ559109v1_fix:3391-6594	1	-	3400	6484	8553170	3	134,618,228,	0,1845,2975,
#Deleted in new
chr11_KZ559109v1_fix	3457	6799	chr11_KZ559109v1_fix:3457-6799	0	-	5826	6777	8553170	3	68,667,41,	0,1779,3301,
#Deleted in new
chr11_KZ559109v1_fix	4296	4414	chr11_KZ559109v1_fix:4296-4414	3	-	4296	4296	8553170	1	118,	0,
#Deleted in new
chr11_KZ559109v1_fix	5229	6765	chr11_KZ559109v1_fix:5229-6765	0	-	5229	5825	8553170	2	652,112,	0,1424,
#Deleted in new
chr11_KZ559109v1_fix	5342	6594	chr11_KZ559109v1_fix:5342-6594	0	-	5342	5825	8553170	2	512,84,	0,1168,
#Deleted in new
chr11_KZ559109v1_fix	5348	6773	chr11_KZ559109v1_fix:5348-6773	0	-	5348	5825	8553170	2	506,36,	0,1389,
#Deleted in new
chr11_KZ559109v1_fix	5379	6802	chr11_KZ559109v1_fix:5379-6802	0	-	5379	6777	8553170	2	502,44,	0,1379,
#Deleted in new
chr11_KZ559109v1_fix	5550	6103	chr11_KZ559109v1_fix:5550-6103	3	+	5550	5550	8553170	1	553,	0,
#Deleted in new
chr11_KZ559109v1_fix	14518	17020	chr11_KZ559109v1_fix:14518-17020	3	+	14540	16260	8553170	3	161,71,1156,	0,1058,1346,
#Deleted in new
chr11_KZ559109v1_fix	17489	22485	chr11_KZ559109v1_fix:17489-22485	3	-	17646	18636	789624	2	1152,512,	0,4484,
#Deleted in new
chr11_KZ559109v1_fix	17647	18636	chr11_KZ559109v1_fix:17647-18636	0	-	18336	18636	8553170	2	230,300,	0,689,
#Deleted in new
chr11_KZ559109v1_fix	45140	74818	chr11_KZ559109v1_fix:45140-74818	0	-	45140	45140	8553170	6	225,63,27,107,85,74,	0,17346,18221,25924,26192,29604,
#Deleted in new
chr11_KZ559109v1_fix	45141	74989	chr11_KZ559109v1_fix:45141-74989	3	-	46658	74831	789624	13	1604,76,68,48,94,60,52,58,63,27,107,85,245,	0,5384,8356,9762,11635,13237,13718,14336,17345,18220,25923,26191,29603,
#Deleted in new
chr11_KZ559109v1_fix	46529	57179	chr11_KZ559109v1_fix:46529-57179	0	-	46529	46529	8553170	5	216,76,68,48,403,	0,3996,6968,8374,10247,
#Deleted in new
chr11_KZ559109v1_fix	46664	71157	chr11_KZ559109v1_fix:46664-71157	0	-	46664	46664	8553170	9	81,76,68,48,94,60,52,27,93,	0,3861,6833,8239,10112,11714,12195,16697,24400,
#Deleted in new
chr11_KZ559109v1_fix	50535	74973	chr11_KZ559109v1_fix:50535-74973	0	-	50535	74831	8553170	11	66,68,48,94,60,52,58,63,107,85,229,	0,2962,4368,6241,7843,8324,8942,11951,20529,20797,24209,
#Deleted in new
chr11_KZ559109v1_fix	59477	74961	chr11_KZ559109v1_fix:59477-74961	0	-	59477	59477	8553170	6	58,63,27,107,85,195,	0,3009,3884,11587,11855,15289,
#Deleted in new
chr11_KZ559109v1_fix	91957	122737	chr11_KZ559109v1_fix:91957-122737	0	-	114377	122737	8553170	9	756,87,108,126,67,131,101,127,295,	0,3435,7365,7980,9250,17680,20382,22378,30485,
#Deleted in new
chr11_KZ559109v1_fix	91957	147727	chr11_KZ559109v1_fix:91957-147727	3	-	92539	147017	789624	19	756,87,108,126,67,131,101,127,157,783,154,108,186,114,54,135,64,133,186,	0,3435,7365,7980,9250,17680,20382,22378,26302,30485,32512,39855,44952,45930,46273,50786,54693,55027,55584,
#Deleted in new
chr11_KZ559109v1_fix	91959	147017	chr11_KZ559109v1_fix:91959-147017	1	-	92539	147017	8553170	18	754,87,108,126,73,131,101,127,157,783,154,108,186,114,54,135,64,33,	0,3433,7363,7978,9248,17678,20380,22376,26300,30483,32510,39853,44950,45928,46271,50784,54691,55025,
#Deleted in new
chr11_KZ559109v1_fix	98981	147736	chr11_KZ559109v1_fix:98981-147736	1	-	99181	147017	8553170	16	449,126,67,131,101,127,157,783,154,108,186,54,135,64,92,195,	0,956,2226,10656,13358,15354,19278,23461,25488,32831,37928,39249,43762,47669,48003,48560,
#Deleted in new
chr11_KZ559109v1_fix	101207	147719	chr11_KZ559109v1_fix:101207-147719	0	-	101207	101207	8553170	11	67,101,127,157,783,154,108,186,135,64,735,	0,11132,13128,17052,21235,23262,30605,35702,41536,45443,45777,
#Deleted in new
chr11_KZ559109v1_fix	122912	147736	chr11_KZ559109v1_fix:122912-147736	0	-	122912	147017	8553170	8	313,154,108,186,135,64,133,195,	0,1557,8900,13997,19831,23738,24072,24629,
#Deleted in new
chr11_KZ559109v1_fix	124532	142679	chr11_KZ559109v1_fix:124532-142679	0	-	124532	124532	8553170	5	91,108,186,54,99,	0,7280,12377,13698,18048,
#Deleted in new
chr11_KZ559109v1_fix	131887	146794	chr11_KZ559109v1_fix:131887-146794	0	-	131887	146687	8553170	5	33,186,54,135,144,	0,5022,6343,10856,14763,
#Deleted in new
chr11_KZ559109v1_fix	137466	142826	chr11_KZ559109v1_fix:137466-142826	0	-	137466	137466	8553170	2	818,83,	0,5277,
#Deleted in new
chr11_KZ559109v1_fix	138230	147749	chr11_KZ559109v1_fix:138230-147749	0	-	138230	147017	8553170	5	54,135,64,133,541,	0,4513,8420,8754,8978,
#Deleted in new
chr11_KZ559109v1_fix	138230	147076	chr11_KZ559109v1_fix:138230-147076	0	-	143180	147017	8553170	5	54,135,205,64,92,	0,4513,4834,8420,8754,
#Deleted in new
chr11_KZ559109v1_fix	142750	147736	chr11_KZ559109v1_fix:142750-147736	0	-	142750	142750	8553170	5	128,72,64,133,195,	0,3691,3900,4234,4791,
#Deleted in new
chr11_KZ559109v1_fix	146650	147756	chr11_KZ559109v1_fix:146650-147756	0	-	146650	147017	8553170	3	64,133,282,	0,334,824,
#Deleted in new
chr11_KZ559109v1_fix	146679	147254	chr11_KZ559109v1_fix:146679-147254	0	-	146679	146679	8553170	2	35,270,	0,305,
#Deleted in new
chr11_KZ559109v1_fix	148883	199668	chr11_KZ559109v1_fix:148883-199668	1	-	149788	199655	789624	17	996,158,341,145,311,188,134,105,125,211,339,121,148,187,137,93,233,	0,3412,6459,7511,7951,14857,16020,17508,20099,27436,29539,34399,34626,36399,38011,48753,50552,
#Deleted in new
chr11_KZ559109v1_fix	149593	156918	chr11_KZ559109v1_fix:149593-156918	0	-	149593	149593	8553170	4	286,158,145,84,	0,2702,6801,7241,
#Deleted in new
chr11_KZ559109v1_fix	155342	157267	chr11_KZ559109v1_fix:155342-157267	0	-	155342	155342	8553170	3	341,145,433,	0,1052,1492,
#Deleted in new
chr11_KZ559109v1_fix	155348	159271	chr11_KZ559109v1_fix:155348-159271	0	-	155348	155348	8553170	3	335,145,2437,	0,1046,1486,
#Deleted in new
chr11_KZ559109v1_fix	156838	166502	chr11_KZ559109v1_fix:156838-166502	0	-	156838	156838	8553170	5	307,100,188,134,111,	0,1265,6902,8065,9553,
#Deleted in new
chr11_KZ559109v1_fix	156870	164625	chr11_KZ559109v1_fix:156870-164625	0	-	156870	156870	8553170	3	275,188,142,	0,6870,7613,
#Deleted in new
chr11_KZ559109v1_fix	159260	159359	chr11_KZ559109v1_fix:159260-159359	3	-	159260	159260	8553170	1	99,	0,
#Deleted in new
chr11_KZ559109v1_fix	162334	163929	chr11_KZ559109v1_fix:162334-163929	0	-	162334	162334	8553170	2	223,189,	0,1406,
#Deleted in new
chr11_KZ559109v1_fix	163650	164549	chr11_KZ559109v1_fix:163650-164549	0	-	163650	163650	8553170	2	278,66,	0,833,
#Deleted in new
chr11_KZ559109v1_fix	164199	176382	chr11_KZ559109v1_fix:164199-176382	0	-	164199	164199	8553170	5	387,134,105,125,63,	0,704,2192,4783,12120,
#Deleted in new
chr11_KZ559109v1_fix	164199	164764	chr11_KZ559109v1_fix:164199-164764	0	-	164199	164199	8553170	2	200,281,	0,284,
#Deleted in new
chr11_KZ559109v1_fix	164206	199653	chr11_KZ559109v1_fix:164206-199653	2	-	164206	164206	8553170	11	831,105,125,211,339,121,148,187,137,93,218,	0,2185,4776,12113,14216,19076,19303,21076,22688,33430,35229,
#Deleted in new
chr11_KZ559109v1_fix	164848	176510	chr11_KZ559109v1_fix:164848-176510	0	-	164848	164848	8553170	4	189,105,125,191,	0,1543,4134,11471,
#Deleted in new
chr11_KZ559109v1_fix	176183	178566	chr11_KZ559109v1_fix:176183-178566	0	-	176183	176183	8553170	2	347,144,	0,2239,
#Deleted in new
chr11_KZ559109v1_fix	185086	186983	chr11_KZ559109v1_fix:185086-186983	0	-	185086	185086	8553170	2	383,89,	0,1808,
#Deleted in new
chr11_KZ559109v1_fix	185353	199808	chr11_KZ559109v1_fix:185353-199808	0	-	185353	199655	8553170	3	116,93,373,	0,12283,14082,
#Deleted in new
chr11_KZ559109v1_fix	185404	199810	chr11_KZ559109v1_fix:185404-199810	0	-	185404	185404	8553170	3	65,137,375,	0,1490,14031,
#Deleted in new
chr11_KZ559109v1_fix	228535	228746	chr11_KZ559109v1_fix:228535-228746	7	+	228535	228535	16724991	1	211,	0,
#Deleted in new
chr11_KZ559109v1_fix	236662	236769	chr11_KZ559109v1_fix:236662-236769	7	-	236662	236662	16724991	1	107,	0,
#Deleted in new
chr11_KZ559109v1_fix	252566	252656	chr11_KZ559109v1_fix:252566-252656	3	-	252566	252566	8553170	1	90,	0,
#Deleted in new
chr11_KZ559109v1_fix	273690	274049	chr11_KZ559109v1_fix:273690-274049	7	+	273690	273690	16724991	1	359,	0,
#Deleted in new
chr11_KZ559110v1_alt	4543	4940	chr11_KZ559110v1_alt:4543-4940	7	-	4543	4543	16724991	1	397,	0,
#Deleted in new
chr11_KZ559110v1_alt	24513	24584	chr11_KZ559110v1_alt:24513-24584	3	+	24513	24513	8553170	1	71,	0,
#Deleted in new
chr11_KZ559110v1_alt	31780	32184	chr11_KZ559110v1_alt:31780-32184	3	+	31780	31780	8553170	1	404,	0,
#Deleted in new
chr11_KZ559110v1_alt	37637	53523	chr11_KZ559110v1_alt:37637-53523	0	+	40881	53523	789624	5	303,110,134,112,71,	0,579,3192,4044,15815,
#Deleted in new
chr11_KZ559110v1_alt	40651	99017	chr11_KZ559110v1_alt:40651-99017	3	+	40881	97870	0	19	312,112,187,102,126,187,94,99,86,120,83,64,68,92,91,265,82,93,1337,	0,1030,12801,14477,15953,17769,23616,24710,28420,28781,29006,34400,35540,39295,41443,43324,47091,48387,57029,
#Deleted in new
chr11_KZ559110v1_alt	40737	70473	chr11_KZ559110v1_alt:40737-70473	0	+	40881	65417	789624	10	226,112,187,102,126,187,99,86,120,816,	0,944,12715,14391,15867,17683,24624,28334,28695,28920,
#Deleted in new
chr11_KZ559110v1_alt	40786	64880	chr11_KZ559110v1_alt:40786-64880	0	+	40786	40786	8553170	7	177,112,187,102,126,187,613,	0,895,12666,14342,15818,17634,23481,
#Deleted in new
chr11_KZ559110v1_alt	40817	70324	chr11_KZ559110v1_alt:40817-70324	0	+	40817	40817	8553170	10	142,112,187,102,126,187,1193,86,120,667,	0,864,12635,14311,15787,17603,23450,28254,28615,28840,
#Deleted in new
chr11_KZ559110v1_alt	40834	98734	chr11_KZ559110v1_alt:40834-98734	1	+	40881	97870	789624	18	129,112,187,102,126,187,94,86,120,83,64,68,92,91,265,82,93,1054,	0,847,12618,14294,15770,17586,23433,28237,28598,28823,34217,35357,39112,41260,43141,46908,48204,56846,
#Deleted in new
chr11_KZ559110v1_alt	40851	70324	chr11_KZ559110v1_alt:40851-70324	1	+	40881	69860	789624	8	112,112,187,102,126,187,120,667,	0,830,12601,14277,15753,17569,28581,28806,
#Deleted in new
chr11_KZ559110v1_alt	40860	98012	chr11_KZ559110v1_alt:40860-98012	1	+	40881	97802	0	7	103,112,187,102,126,187,332,	0,821,12592,14268,15744,17560,56820,
#Deleted in new
chr11_KZ559110v1_alt	41186	55230	chr11_KZ559110v1_alt:41186-55230	0	+	41761	55230	789624	4	83,112,187,102,	0,495,12266,13942,
#Deleted in new
chr11_KZ559110v1_alt	68614	75808	chr11_KZ559110v1_alt:68614-75808	0	+	68614	68614	8553170	3	938,83,757,	0,1043,6437,
#Deleted in new
chr11_KZ559110v1_alt	99736	104243	chr11_KZ559110v1_alt:99736-104243	3	+	99736	99736	8553170	1	4507,	0,
#Deleted in new
chr11_KZ559110v1_alt	107282	129487	chr11_KZ559110v1_alt:107282-129487	3	-	108527	129077	0	11	1392,63,120,106,71,59,104,158,57,50,474,	0,1653,2148,4300,5042,9376,10055,12858,14014,16975,21731,
#Deleted in new
chr11_KZ559110v1_alt	107566	116888	chr11_KZ559110v1_alt:107566-116888	1	-	108527	111687	789624	6	1108,63,120,106,71,230,	0,1369,1864,4016,4758,9092,
#Deleted in new
chr11_KZ559110v1_alt	107571	129164	chr11_KZ559110v1_alt:107571-129164	0	-	107571	107571	8553170	9	1103,63,120,106,71,3640,57,50,151,	0,1364,1859,4011,4753,9087,13725,16686,21442,
#Deleted in new
chr11_KZ559110v1_alt	107571	129182	chr11_KZ559110v1_alt:107571-129182	1	-	108527	129077	0	10	1103,63,120,106,71,59,104,158,50,169,	0,1364,1859,4011,4753,9087,9766,12569,16686,21442,
#Deleted in new
chr11_KZ559110v1_alt	108071	115601	chr11_KZ559110v1_alt:108071-115601	1	-	108527	111687	789624	4	603,63,120,4019,	0,864,1359,3511,
#Deleted in new
chr11_KZ559110v1_alt	108529	129153	chr11_KZ559110v1_alt:108529-129153	0	-	112870	129077	789624	12	145,63,120,106,71,63,59,104,158,57,50,140,	0,406,901,3053,3795,4341,8129,8808,11611,12767,15728,20484,
#Deleted in new
chr11_KZ559110v1_alt	116693	129172	chr11_KZ559110v1_alt:116693-129172	0	-	117424	129077	789624	6	21,121,158,57,50,159,	0,644,3447,4603,7564,12320,
#Deleted in new
chr11_KZ559110v1_alt	119431	129200	chr11_KZ559110v1_alt:119431-129200	1	-	119521	129077	789624	5	112,158,57,50,187,	0,709,1865,4826,9582,
#Deleted in new
chr11_KZ559110v1_alt	120101	129194	chr11_KZ559110v1_alt:120101-129194	0	-	122670	129077	789624	5	197,57,90,50,181,	0,1195,2485,4156,8912,
#Deleted in new
chr11_KZ559110v1_alt	120140	129195	chr11_KZ559110v1_alt:120140-129195	0	-	128723	129077	789624	4	158,57,50,544,	0,1156,4117,8511,
#Deleted in new
chr11_KZ559110v1_alt	123869	129157	chr11_KZ559110v1_alt:123869-129157	0	-	123869	123869	8553170	2	438,144,	0,5144,
#Deleted in new
chr11_KZ559110v1_alt	129275	132661	chr11_KZ559110v1_alt:129275-132661	3	+	129275	129275	8553170	1	3386,	0,
#Deleted in new
chr11_KZ559110v1_alt	219493	221106	chr11_KZ559110v1_alt:219493-221106	7	+	219493	219493	16724991	1	1613,	0,
#Deleted in new
chr11_KZ559111v1_alt	28086	47135	chr11_KZ559111v1_alt:28086-47135	3	+	28109	46918	789624	5	99,182,98,130,286,	0,4415,6737,9301,18763,
#Deleted in new
chr11_KZ559111v1_alt	28086	38681	chr11_KZ559111v1_alt:28086-38681	1	+	28109	38477	789624	5	99,182,98,130,321,	0,4415,6737,9301,10274,
#Deleted in new
chr11_KZ559111v1_alt	32533	59801	chr11_KZ559111v1_alt:32533-59801	3	+	32533	32533	8553170	7	150,98,130,179,98,135,98,	0,2290,4854,22656,24188,26271,27170,
#Deleted in new
chr11_KZ559111v1_alt	53687	59801	chr11_KZ559111v1_alt:53687-59801	3	+	53687	59779	789624	5	67,179,98,135,98,	0,1502,3034,5117,6016,
#Deleted in new
chr11_KZ559111v1_alt	67674	120732	chr11_KZ559111v1_alt:67674-120732	0	+	67674	67674	8553170	10	141,119,233,111,145,30,182,98,148,276,	0,33651,39161,41450,43446,44265,45860,46888,51762,52782,
#Deleted in new
chr11_KZ559111v1_alt	106835	120732	chr11_KZ559111v1_alt:106835-120732	3	+	107046	120489	789624	5	233,182,98,148,276,	0,6699,7727,12601,13621,
#Deleted in new
chr11_KZ559111v1_alt	111721	120732	chr11_KZ559111v1_alt:111721-120732	0	+	111721	111721	8553170	5	248,182,98,148,276,	0,1813,2841,7715,8735,
#Deleted in new
chr11_KZ559111v1_alt	129929	137702	chr11_KZ559111v1_alt:129929-137702	3	+	130114	136731	789624	4	249,179,104,1101,	0,3194,4396,6672,
#Deleted in new
chr11_KZ559111v1_alt	130114	133388	chr11_KZ559111v1_alt:130114-133388	0	+	130114	130114	8553170	2	64,265,	0,3009,
#Deleted in new
chr11_KZ559111v1_alt	130143	136549	chr11_KZ559111v1_alt:130143-136549	1	+	133152	136378	789624	4	35,179,104,178,	0,2980,4182,6228,
#Deleted in new
chr11_KZ559111v1_alt	155034	164111	chr11_KZ559111v1_alt:155034-164111	1	+	155034	164111	8553170	6	156,138,57,162,102,27,	0,1307,3105,5797,8420,9050,
#Deleted in new
chr11_KZ559111v1_alt	155034	164111	chr11_KZ559111v1_alt:155034-164111	3	+	155034	164111	8553170	6	156,138,57,162,102,27,	0,1307,3105,5797,8420,9050,
#Deleted in new
chr11_KZ559111v1_alt	155034	158167	chr11_KZ559111v1_alt:155034-158167	1	+	155034	158167	789624	3	156,65,28,	0,329,3105,
#Deleted in new
chr11_KZ559111v1_alt	155034	158167	chr11_KZ559111v1_alt:155034-158167	1	+	155034	158167	789624	3	156,65,28,	0,329,3105,
#Deleted in new
chr11_KZ559111v1_alt	171238	172278	chr11_KZ559111v1_alt:171238-172278	7	+	171238	171238	16724991	2	382,355,	0,685,
#Deleted in new
chr12	12309	13501	chr12:12309-13501	7	+	12309	12309	16724991	4	49,85,100,132,	0,430,792,1060,
#Partially deleted in new
chr12	14521	32015	chr12:14521-32015	7	-	14521	14521	16724991	11	423,69,153,159,202,136,137,147,99,154,138,	0,563,1391,2200,2447,2826,3201,3515,3851,12279,17356,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	36601	38133	chr12:36601-38133	3	-	36601	36601	789624	3	621,205,361,	0,723,1171,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	36660	38102	chr12:36660-38102	0	-	36660	36660	8553170	2	869,330,	0,1112,
#Partially deleted in new
chr12	66764	178460	chr12:66764-178460	1	+	66882	175033	789624	14	672,69,280,1088,162,123,167,140,126,100,162,93,50,3862,	0,32381,58868,71502,74359,90260,90763,95161,96729,98669,98964,102248,104347,107834,
#Partially deleted in new
chr12	77375	171330	chr12:77375-171330	3	+	138272	171321	789624	13	337,69,1088,162,123,167,140,126,100,162,93,50,84,	0,21770,60891,63748,79649,80152,84550,86118,88058,88353,91637,93736,93871,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	106523	111850	chr12:106523-111850	3	-	106523	106523	8553170	2	354,232,	0,5095,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	137410	149169	chr12:137410-149169	0	-	137410	137410	789624	10	217,153,94,131,156,333,1300,171,261,91,	0,889,1140,2829,3237,3501,3923,5828,6898,11668,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	139533	149115	chr12:139533-149115	3	-	139533	139533	8553170	7	312,131,156,333,1292,1331,1358,	0,706,1114,1378,1800,3705,8224,
#Deleted in new
chr12	164663	166321	chr12:164663-166321	3	-	164663	164663	8553170	2	91,1010,	0,648,
#Partially deleted in new
chr12	166855	182396	chr12:166855-182396	3	-	166855	166855	8553170	3	646,88,329,	0,764,15212,
#Partially deleted in new
chr12	167001	182399	chr12:167001-182399	0	-	167001	167001	8553170	2	706,332,	0,15066,
#Deleted in new
chr12	168977	171466	chr12:168977-171466	0	+	168977	168977	8553170	3	128,50,220,	0,2134,2269,
#Deleted in new
chr12	169054	175359	chr12:169054-175359	0	+	169054	169054	8553170	4	51,50,295,143,	0,2057,5561,6162,
#Deleted in new
chr12	176481	178454	chr12:176481-178454	0	+	176481	176481	8553170	2	82,444,	0,1529,
#Partially deleted in new
chr12	190076	213697	chr12:190076-213697	3	-	191067	209986	789624	16	1135,171,101,103,138,113,125,104,135,133,88,141,135,271,85,187,	0,2401,3200,5148,6047,6693,7300,7823,8720,10574,11685,12663,14487,19696,21949,23434,
#Partially deleted in new
chr12	190076	210605	chr12:190076-210605	1	-	191067	209986	789624	15	1135,171,101,103,138,113,125,104,135,133,88,141,135,271,401,	0,2401,3200,5148,6047,6693,7300,7823,8720,10574,11685,12663,14487,19696,20128,
#Partially deleted in new
chr12	190085	199058	chr12:190085-199058	0	-	190085	190085	8553170	7	1126,171,101,103,125,104,262,	0,2392,3191,5139,7291,7814,8711,
#Partially deleted in new
chr12	190135	213338	chr12:190135-213338	1	-	191067	209986	789624	17	1076,171,101,103,138,113,125,104,135,133,88,141,135,271,364,85,49,	0,2342,3141,5089,5988,6634,7241,7764,8661,10515,11626,12604,14428,19637,20069,21890,23154,
#Partially deleted in new
chr12	191067	214120	chr12:191067-214120	1	-	191067	209986	789624	15	144,171,101,103,138,113,125,104,135,133,88,141,135,271,199,	0,1410,2209,4157,5056,5702,6309,6832,7729,9583,10694,11672,13496,18705,22854,
#Partially deleted in new
chr12	193035	194130	chr12:193035-194130	3	+	193035	193035	8553170	2	145,170,	0,925,
#Partially deleted in new
chr12	195225	199054	chr12:195225-199054	0	-	195225	195225	8553170	5	102,138,113,125,258,	0,898,1544,2151,3571,
#Partially deleted in new
chr12	196233	199771	chr12:196233-199771	0	-	196233	196233	8553170	6	28,113,125,104,135,69,	0,536,1143,1666,2563,3469,
#Partially deleted in new
chr12	196829	199060	chr12:196829-199060	0	-	196829	196829	8553170	4	53,125,104,264,	0,547,1070,1967,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	197910	203507	chr12:197910-203507	0	-	197910	197910	8553170	5	93,135,133,141,239,	0,886,2740,4829,5358,
#Partially deleted in new
chr12	198670	202814	chr12:198670-202814	0	-	198670	198670	8553170	4	261,133,88,75,	0,1980,3091,4069,
#Deleted in new
chr12	201227	202782	chr12:201227-202782	0	-	201227	201227	8553170	2	622,43,	0,1512,
#Partially deleted in new
chr12	202739	213545	chr12:202739-213545	0	-	202739	202739	8553170	5	141,135,153,85,35,	0,1824,7151,9286,10771,
#Partially deleted in new
chr12	202791	211216	chr12:202791-211216	0	-	202791	209986	789624	4	89,135,271,82,	0,1772,6981,8343,
#Partially deleted in new
chr12	202868	214090	chr12:202868-214090	0	-	202868	209986	789624	5	12,135,153,85,169,	0,1695,7022,9157,11053,
#Deleted in new
chr12	203641	205094	chr12:203641-205094	3	+	203641	203641	789624	3	98,212,455,	0,376,998,
#Deleted in new
chr12	209695	214570	chr12:209695-214570	0	-	209695	209695	8553170	4	348,85,116,18,	0,2330,4226,4857,
#Deleted in new
chr12	212071	213717	chr12:212071-213717	0	-	212071	212071	8553170	2	39,428,	0,1218,
#Partially deleted in new
chr12	220620	262873	chr12:220620-262873	1	-	220947	260052	789624	13	450,171,101,103,138,113,125,104,135,133,85,207,85,	0,755,1911,2511,3371,3780,5769,6944,14469,16537,17305,39230,42168,
#Partially deleted in new
chr12	220624	262836	chr12:220624-262836	3	-	220947	260052	789624	15	446,171,101,103,138,113,125,104,135,133,85,141,135,207,48,	0,751,1907,2507,3367,3776,5765,6940,14465,16533,17301,21989,23054,39226,42164,
#Deleted in new
chr12	222579	224431	chr12:222579-224431	0	-	222579	222579	8553170	5	53,103,100,138,31,	0,552,1166,1412,1821,
#Partially deleted in new
chr12	223113	237241	chr12:223113-237241	0	-	223113	223113	8553170	3	121,135,84,	0,11976,14044,
#Partially deleted in new
chr12	224025	226679	chr12:224025-226679	0	-	224025	224025	8553170	3	91,113,290,	0,375,2364,
#Partially deleted in new
chr12	224467	226971	chr12:224467-226971	0	-	224467	224467	8553170	3	46,125,319,	0,1922,2185,
#Partially deleted in new
chr12	235193	262873	chr12:235193-262873	0	-	235193	260052	789624	5	31,133,85,207,85,	0,1964,2732,24657,27595,
#Partially deleted in new
chr12	236905	262836	chr12:236905-262836	0	-	236905	236905	8553170	6	385,85,141,135,207,48,	0,1020,5708,6773,22945,25883,
#Deleted in new
chr12	237149	238309	chr12:237149-238309	0	-	237149	237149	8553170	2	141,384,	0,776,
#Partially deleted in new
chr12	237925	262816	chr12:237925-262816	0	-	242730	260052	789624	5	85,152,135,207,28,	0,4688,5753,21925,24863,
#Partially deleted in new
chr12	237947	262836	chr12:237947-262836	0	-	238254	242734	789624	5	63,173,141,135,48,	0,223,4666,5731,24841,
#Partially deleted in new
chr12	253441	257299	chr12:253441-257299	3	-	253441	253441	789624	3	306,168,29,	0,3031,3829,
#Partially deleted in new
chr12	259004	262836	chr12:259004-262836	1	-	259758	260052	789624	2	1053,48,	0,3784,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	273953	277123	chr12:273953-277123	3	-	273953	273953	8553170	1	3170,	0,
#Partially deleted in new
chr12	280128	389454	chr12:280128-389454	3	-	285455	389091	0	28	5534,411,221,160,144,552,162,180,139,356,115,151,125,182,195,120,163,182,159,120,159,92,106,135,171,123,78,528,	0,12630,15444,16912,26817,27325,29674,30756,32927,37977,40866,42288,42953,43471,48706,51690,53358,54112,70492,72076,73947,75029,76303,82834,85805,103902,105768,108798,
#Partially deleted in new
chr12	285455	292925	chr12:285455-292925	0	-	285455	285455	8553170	3	207,82,167,	0,670,7303,
#Deleted in new
chr12	306893	307773	chr12:306893-307773	0	-	306893	306893	8553170	2	196,320,	0,560,
#Partially deleted in new
chr12	309890	389282	chr12:309890-389282	0	-	309890	389091	789624	13	74,180,139,356,115,151,125,182,195,120,163,182,356,	0,994,3165,8215,11104,12526,13191,13709,18944,21928,23596,24350,79036,
#Partially deleted in new
chr12	309893	311214	chr12:309893-311214	0	-	309893	309893	8553170	2	71,330,	0,991,
#Partially deleted in new
chr12	322262	323154	chr12:322262-323154	0	-	322262	322262	8553170	2	305,73,	0,819,
#Partially deleted in new
chr12	323594	329170	chr12:323594-329170	0	-	323594	323594	8553170	2	187,336,	0,5240,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	333067	334328	chr12:333067-334328	0	-	333067	333067	8553170	2	582,88,	0,1173,
#Partially deleted in new
chr12	365969	389264	chr12:365969-389264	0	-	365969	389091	789624	3	135,78,338,	0,19927,22957,
#Partially deleted in new
chr12	366045	388530	chr12:366045-388530	0	-	366045	388340	789624	4	59,123,78,298,	0,17985,19851,22187,
#Partially deleted in new
chr12	384030	389273	chr12:384030-389273	0	-	384030	389091	789624	4	123,78,27,347,	0,1866,3217,4896,
#Deleted in new
chr12	389272	390125	chr12:389272-390125	0	+	389272	389272	8553170	2	214,154,	0,699,
#Partially deleted in new
chr12	389347	442004	chr12:389347-442004	1	+	411804	441920	789624	11	139,232,143,97,73,89,149,220,126,153,231,	0,22399,29146,39421,41316,42518,43826,48987,51269,51496,52426,
#Partially deleted in new
chr12	389349	442638	chr12:389349-442638	1	+	411804	441920	789624	12	137,54,232,143,97,73,89,149,220,126,153,865,	0,16161,22397,29144,39419,41314,42516,43824,48985,51267,51494,52424,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	389361	418499	chr12:389361-418499	0	+	409383	418499	789624	5	166,98,54,232,6,	0,5762,20006,22385,29132,
#Partially deleted in new
chr12	389394	440930	chr12:389394-440930	0	+	411804	440930	789624	11	92,54,232,143,97,73,89,149,220,126,87,	0,16116,22352,29099,39374,41269,42471,43779,48940,51222,51449,
#Partially deleted in new
chr12	389418	433480	chr12:389418-433480	0	+	389418	389418	8553170	8	68,232,143,97,73,89,149,74,	0,22328,29075,39350,41245,42447,43755,43988,
#Partially deleted in new
chr12	401575	442645	chr12:401575-442645	3	+	409383	441920	789624	13	109,54,54,232,143,97,73,89,149,220,126,153,872,	0,3935,7792,10171,16918,27193,29088,30290,31598,36759,39041,39268,40198,
#Partially deleted in new
chr12	401636	442642	chr12:401636-442642	1	+	411804	441920	789624	12	48,54,232,143,97,73,89,149,220,126,153,869,	0,3874,10110,16857,27132,29027,30229,31537,36698,38980,39207,40137,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	401650	409781	chr12:401650-409781	0	+	401650	401650	8553170	3	34,54,414,	0,3860,7717,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	401661	418881	chr12:401661-418881	0	+	401661	401661	8553170	5	23,54,54,232,388,	0,3849,7706,10085,16832,
#Partially deleted in new
chr12	433210	438611	chr12:433210-438611	0	+	433210	433210	8553170	2	112,277,	0,5124,
#Partially deleted in new
chr12	438460	442385	chr12:438460-442385	0	+	438460	438460	8553170	2	94,612,	0,3313,
#Partially deleted in new
chr12	460363	563509	chr12:460363-563509	3	+	460376	561451	789624	20	182,104,78,96,91,101,68,79,67,144,110,101,62,790,320,154,73,154,127,2167,	0,74802,75854,83975,84518,85005,86282,87660,87867,89405,90558,91699,92103,92830,96183,97244,97652,98144,98931,100979,
#Partially deleted in new
chr12	460469	546828	chr12:460469-546828	0	+	460469	460469	8553170	7	76,104,78,96,91,101,183,	0,74696,75748,83869,84412,84899,86176,
#Partially deleted in new
chr12	540462	548301	chr12:540462-548301	0	+	540462	540462	8553170	7	47,96,91,101,68,79,71,	0,3876,4419,4906,6183,7561,7768,
#Deleted in new
chr12	543117	545404	chr12:543117-545404	0	+	543117	543117	8553170	4	88,96,91,265,	0,1221,1764,2022,
#Partially deleted in new
chr12	543132	555430	chr12:543132-555430	0	+	543148	555430	789624	13	73,96,91,101,68,79,67,144,110,101,62,793,141,	0,1206,1749,2236,3513,4891,5098,6636,7789,8930,9334,10058,12157,
#Partially deleted in new
chr12	547638	563478	chr12:547638-563478	0	+	547638	547638	8553170	12	464,67,144,110,101,1517,320,154,198,154,127,2136,	0,592,2130,3283,4424,4828,8908,9969,10252,10869,11656,13704,
#Partially deleted in new
chr12	552074	563498	chr12:552074-563498	0	+	552074	552074	8553170	8	89,1517,320,154,73,154,127,2156,	0,392,4472,5533,5941,6433,7220,9268,
#Partially deleted in new
chr12	564295	663779	chr12:564295-663779	3	-	565234	663498	789624	4	386,185,229,452,	0,921,1654,99032,
#Partially deleted in new
chr12	564375	610418	chr12:564375-610418	1	-	565234	610357	789624	4	306,185,229,73,	0,841,1574,45970,
#Partially deleted in new
chr12	564580	643665	chr12:564580-643665	1	-	565234	566103	789624	4	101,185,229,155,	0,636,1369,78930,
#Partially deleted in new
chr12	565359	643636	chr12:565359-643636	1	-	565830	566103	789624	2	819,126,	0,78151,
#Partially deleted in new
chr12	565832	643685	chr12:565832-643685	0	-	565832	565832	8553170	2	148,175,	0,77678,
#Deleted in new
chr12	585864	586486	chr12:585864-586486	3	-	585864	585864	789624	2	134,239,	0,383,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	589529	589589	chr12:589529-589589	3	-	589529	589529	8553170	1	60,	0,
#Deleted in new
chr12	590632	591269	chr12:590632-591269	3	+	590632	590632	8553170	2	140,249,	0,388,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	630890	645878	chr12:630890-645878	1	+	630890	630890	789624	5	95,34,108,181,1920,	0,1323,1618,9953,13068,
#Partially deleted in new
chr12	642673	663706	chr12:642673-663706	3	+	642673	642673	8553170	3	65,144,390,	0,1285,20643,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	642980	645415	chr12:642980-645415	0	+	642980	642980	8553170	2	737,1457,	0,978,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	674800	684127	chr12:674800-684127	3	-	674800	674800	8553170	3	219,144,133,	0,6951,9194,
#Partially deleted in new
chr12	752592	911300	chr12:752592-911300	1	+	753565	908792	789624	26	1732,173,221,158,89,220,331,188,84,147,98,163,117,174,58,123,1436,84,84,58,74,662,203,195,188,2826,	0,61049,74449,77410,104568,106652,108420,109490,118672,125622,129099,129318,130350,130802,131181,131528,132056,134628,136547,137860,141969,143478,144886,147883,155254,155882,
#Partially deleted in new
chr12	752922	911452	chr12:752922-911452	3	+	753565	908792	0	28	1402,173,221,158,89,220,331,188,84,150,459,279,98,163,117,174,58,123,1436,84,84,61,74,662,203,195,188,2978,	0,60719,74119,77080,104238,106322,108090,109160,118342,125289,126650,127798,128769,128988,130020,130472,130851,131198,131726,134298,136217,137530,141639,143148,144556,147553,154924,155552,
#Partially deleted in new
chr12	752922	911452	chr12:752922-911452	1	+	753565	908792	0	28	1402,173,221,158,89,220,331,188,255,1239,84,150,98,163,117,174,58,123,1436,84,84,61,74,662,203,195,188,2978,	0,60719,74119,77080,104238,106322,108090,109160,112187,114943,118342,125289,128769,128988,130020,130472,130851,131198,131726,134298,136217,137530,141639,143148,144556,147553,154924,155552,
#Partially deleted in new
chr12	752922	911451	chr12:752922-911451	1	+	753565	908792	0	31	1402,173,221,158,89,220,331,188,1239,84,150,459,279,98,163,117,174,58,123,1436,84,84,61,74,662,203,195,72,42,188,2977,	0,60719,74119,77080,104238,106322,108090,109160,114943,118342,125289,126650,127798,128769,128988,130020,130472,130851,131198,131726,134298,136217,137530,141639,143148,144556,147553,148638,151530,154924,155552,
#Partially deleted in new
chr12	752922	911452	chr12:752922-911452	1	+	753565	908792	0	28	1402,173,221,158,89,220,331,188,1239,84,150,279,98,163,117,174,58,123,1436,84,84,61,74,662,203,195,188,2978,	0,60719,74119,77080,104238,106322,108090,109160,114943,118342,125289,127798,128769,128988,130020,130472,130851,131198,131726,134298,136217,137530,141639,143148,144556,147553,154924,155552,
#Partially deleted in new
chr12	753055	827501	chr12:753055-827501	1	+	753565	827291	789624	3	1269,173,460,	0,60586,73986,
#Deleted in new
chr12	781132	781258	chr12:781132-781258	3	+	781132	781132	8553170	1	126,	0,
#Partially deleted in new
chr12	829924	861135	chr12:829924-861135	0	+	829924	829924	8553170	4	236,89,220,123,	0,27236,29320,31088,
#Partially deleted in new
chr12	851423	859375	chr12:851423-859375	0	+	851423	851423	8553170	3	359,89,131,	0,5737,7821,
#Partially deleted in new
chr12	862080	882994	chr12:862080-882994	0	+	862080	882994	789624	5	190,150,98,163,52,	0,16131,19611,19830,20862,
#Partially deleted in new
chr12	862173	880917	chr12:862173-880917	0	+	862173	880917	789624	4	97,84,150,197,	0,9091,16038,18547,
#Partially deleted in new
chr12	862234	880814	chr12:862234-880814	0	+	862234	880814	789624	4	36,147,459,94,	0,15980,17338,18486,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	865287	867139	chr12:865287-867139	3	-	865287	865287	8553170	2	1104,57,	0,1795,
#Deleted in new
chr12	867793	869194	chr12:867793-869194	1	+	867829	869134	789624	1	1401,	0,
#Partially deleted in new
chr12	868567	878312	chr12:868567-878312	0	+	868567	878312	789624	3	537,84,101,	0,2697,9644,
#Deleted in new
chr12	878014	881971	chr12:878014-881971	0	+	878014	878014	8553170	3	347,98,61,	0,3677,3896,
#Partially deleted in new
chr12	881470	883419	chr12:881470-883419	0	+	881470	881470	8553170	4	319,163,117,25,	0,440,1472,1924,
#Partially deleted in new
chr12	881763	884688	chr12:881763-884688	0	+	881763	884688	789624	6	26,163,174,58,123,40,	0,147,1631,2010,2357,2885,
#Partially deleted in new
chr12	896622	901074	chr12:896622-901074	0	+	896622	896622	8553170	3	110,203,599,	0,856,3853,
#Partially deleted in new
chr12	900472	908201	chr12:900472-908201	0	+	900472	900472	8553170	2	198,355,	0,7374,
#Partially deleted in new
chr12	900596	907956	chr12:900596-907956	0	+	900596	907956	789624	3	74,42,110,	0,3856,7250,
#Partially deleted in new
chr12	900597	904487	chr12:900597-904487	0	+	900597	904487	789624	3	73,93,35,	0,963,3855,
#Deleted in new
chr12	907719	909033	chr12:907719-909033	0	+	907719	907719	8553170	2	315,559,	0,755,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	912076	949722	chr12:912076-949722	1	-	913390	933058	0	12	1376,228,102,140,182,76,119,68,94,102,102,121,	0,1817,2354,4267,4562,13373,15068,17742,17974,19143,20898,37525,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	912154	933076	chr12:912154-933076	0	-	912154	912154	8553170	11	1298,228,102,140,182,76,151,119,326,102,102,	0,1739,2276,4189,4484,13295,14641,14990,17664,19065,20820,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	912488	949641	chr12:912488-949641	0	-	927246	933058	0	14	964,228,102,140,182,76,151,119,123,94,102,102,76,40,	0,1405,1942,3855,4150,12961,14307,14656,17275,17562,18731,20486,24318,37113,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	912494	949626	chr12:912494-949626	0	-	912494	912494	8553170	11	958,228,102,189,182,76,119,381,102,102,25,	0,1399,1936,3849,4144,12955,14650,17269,18725,20480,37107,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	912544	990053	chr12:912544-990053	3	-	913390	933058	0	12	908,228,102,140,182,76,119,68,94,102,102,245,	0,1349,1886,3799,4094,12905,14600,17274,17506,18675,20430,77264,
#Partially deleted in new
chr12	912757	949682	chr12:912757-949682	0	-	912757	912757	8553170	12	695,228,122,140,182,76,468,123,94,102,102,81,	0,1136,1653,3586,3881,12692,14038,17006,17293,18462,20217,36844,
#Partially deleted in new
chr12	913233	916582	chr12:913233-916582	0	-	913233	913233	8553170	4	219,228,122,239,	0,660,1177,3110,
#Deleted in new
chr12	913358	914198	chr12:913358-914198	0	-	913358	913358	8553170	2	94,305,	0,535,
#Partially deleted in new
chr12	913891	949665	chr12:913891-949665	0	-	926926	933058	789624	10	230,102,140,182,76,151,94,102,102,64,	0,539,2452,2747,11558,12904,16159,17328,19083,35710,
#Partially deleted in new
chr12	913893	949665	chr12:913893-949665	0	-	927246	933058	0	12	228,102,192,182,76,151,119,123,94,102,102,60,	0,537,2450,2745,11556,12902,13251,15870,16157,17326,19081,35712,
#Partially deleted in new
chr12	913893	949665	chr12:913893-949665	0	-	913893	913893	8553170	10	228,102,477,76,119,68,172,102,102,64,	0,537,2450,11556,13251,15925,16079,17326,19081,35708,
#Partially deleted in new
chr12	916205	949667	chr12:916205-949667	1	-	916354	933058	789624	9	330,182,76,119,68,94,102,102,66,	0,433,9244,10939,13613,13845,15014,16769,33396,
#Partially deleted in new
chr12	916704	949669	chr12:916704-949669	0	-	916704	916704	8553170	6	116,76,119,68,94,68,	0,8745,10440,13114,13346,32897,
#Partially deleted in new
chr12	925462	933058	chr12:925462-933058	1	-	925462	933058	0	7	63,151,119,68,94,102,84,	0,1333,1682,4356,4588,5757,7512,
#Partially deleted in new
chr12	926848	949642	chr12:926848-949642	0	-	926848	926848	8553170	6	98,119,123,94,102,41,	0,296,2915,3202,4371,22753,
#Partially deleted in new
chr12	927222	949628	chr12:927222-949628	0	-	927222	933058	789624	6	41,68,94,102,102,226,	0,2596,2828,3997,5752,22180,
#Partially deleted in new
chr12	929771	949519	chr12:929771-949519	0	-	929771	933058	789624	5	115,94,102,102,117,	0,279,1448,3203,19631,
#Partially deleted in new
chr12	929929	949649	chr12:929929-949649	1	-	929973	933058	0	4	215,102,102,44,	0,1290,3045,19676,
#Partially deleted in new
chr12	929936	949673	chr12:929936-949673	1	-	929973	933058	0	5	208,102,102,76,72,	0,1283,3038,6870,19665,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	974132	990041	chr12:974132-990041	3	-	974132	974132	8553170	2	2974,233,	0,15676,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	976803	991122	chr12:976803-991122	1	-	976803	976803	8553170	3	264,233,72,	0,13005,14247,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	976978	991190	chr12:976978-991190	1	-	976978	976978	8553170	3	128,233,140,	0,12830,14072,
#Deleted in new
chr12	989851	990608	chr12:989851-990608	1	-	989851	989851	8553170	2	190,322,	0,435,
#Partially deleted in new
chr12	990508	1028172	chr12:990508-1028172	0	+	1027903	1028172	789624	2	121,425,	0,37239,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr12	991207	1495933	chr12:991207-1495933	3	+	1027903	1490230	789624	18	115,825,417,75,156,168,168,138,141,141,194,136,132,161,145,99,189,5841,	0,36540,91956,113542,118984,124658,150412,189332,190717,192073,198651,245561,271826,298644,380625,416941,453354,498885,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr12	991232	1490729	chr12:991232-1490729	0	+	1027903	1410415	789624	21	255,117,825,417,75,156,84,168,168,138,141,141,194,12,136,161,145,99,65,189,637,	0,36190,36515,91931,113517,118959,120982,124633,150387,189307,190692,192048,198626,213268,245536,298619,380600,416916,419156,453329,498860,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr12	991232	1490729	chr12:991232-1490729	1	+	1027903	1490230	789624	21	255,117,825,417,75,156,84,168,168,138,141,141,194,12,136,132,161,145,99,189,637,	0,36190,36515,91931,113517,118959,120982,124633,150387,189307,190692,192048,198626,213268,245536,271801,298619,380600,416916,453329,498860,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr12	991237	1491567	chr12:991237-1491567	0	+	1027903	1410415	789624	19	250,825,417,75,156,168,168,138,141,141,194,12,136,161,145,99,65,189,1475,	0,36510,91926,113512,118954,124628,150382,189302,190687,192043,198621,213263,245531,298614,380595,416911,419151,453324,498855,
#Partially deleted in new
chr12	991262	1116033	chr12:991262-1116033	0	+	1028356	1116033	789624	6	225,234,417,75,156,168,	0,37076,91901,113487,118929,124603,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr12	991266	1493549	chr12:991266-1493549	0	+	1027903	1410415	789624	20	221,825,417,75,156,168,168,138,141,141,194,12,136,132,161,145,99,65,189,3457,	0,36481,91897,113483,118925,124599,150353,189273,190658,192014,198592,213234,245502,271767,298585,380566,416882,419122,453295,498826,
#Partially deleted in new
chr12	991272	1490377	chr12:991272-1490377	0	+	1027903	1410415	789624	16	50,825,168,138,141,141,194,12,136,132,161,145,99,65,189,285,	0,36475,150347,189267,190652,192008,198586,213228,245496,271761,298579,380560,416876,419116,453289,498820,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr12	991297	1492487	chr12:991297-1492487	1	+	1027903	1490230	789624	19	25,825,417,75,156,84,168,168,138,141,141,194,136,132,161,145,99,189,2395,	0,36450,91866,113452,118894,120917,124568,150322,189242,190627,191983,198561,245471,271736,298554,380535,416851,453264,498795,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	991621	1028339	chr12:991621-1028339	0	+	1027903	1028339	789624	3	174,102,592,	0,29053,36126,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	998321	1027842	chr12:998321-1027842	0	+	998321	998321	8553170	2	161,95,	0,29426,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr12	1027746	1495924	chr12:1027746-1495924	1	+	1027903	1490230	789624	17	826,417,75,156,168,168,138,141,141,194,136,132,161,145,99,189,5832,	0,55417,77003,82445,88119,113873,152793,154178,155534,162112,209022,235287,262105,344086,380402,416815,462346,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr12	1027746	1495924	chr12:1027746-1495924	1	+	1027903	1490230	789624	18	826,417,75,156,84,168,168,138,141,141,194,136,132,161,145,99,189,5832,	0,55417,77003,82445,84468,88119,113873,152793,154178,155534,162112,209022,235287,262105,344086,380402,416815,462346,
#Partially deleted in new
chr12	1027746	1490377	chr12:1027746-1490377	1	+	1027903	1410415	789624	15	826,168,138,141,141,194,12,136,132,161,145,99,65,189,285,	0,113873,152793,154178,155534,162112,176754,209022,235287,262105,344086,380402,382642,416815,462346,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr12	1027771	1492487	chr12:1027771-1492487	1	+	1027903	1480890	789624	19	801,417,75,156,84,168,168,138,141,141,194,136,132,161,145,99,189,56,2395,	0,55392,76978,82420,84443,88094,113848,152768,154153,155509,162087,208997,235262,262080,344061,380377,416790,453071,462321,
#Partially deleted in new
chr12	1083140	1444589	chr12:1083140-1444589	0	+	1083140	1083140	8553170	16	440,75,156,168,168,138,141,141,194,12,136,161,145,99,65,28,	0,21609,27051,32725,58479,97399,98784,100140,106718,121360,153628,206711,288692,325008,327248,361421,
#Partially deleted in new
chr12	1083483	1116201	chr12:1083483-1116201	0	+	1083483	1083483	8553170	5	97,75,156,84,336,	0,21266,26708,28731,32382,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	1083572	1244956	chr12:1083572-1244956	0	+	1083572	1083572	8553170	12	8,75,156,93,168,168,138,141,141,194,136,414,	0,21177,26619,28642,32293,58047,96967,98352,99708,106286,153196,160970,
#Partially deleted in new
chr12	1115623	1141740	chr12:1115623-1141740	0	+	1115623	1115623	8553170	2	410,121,	0,25996,
#Partially deleted in new
chr12	1151809	1153059	chr12:1151809-1153059	7	-	1151809	1151809	16724991	2	95,793,	0,457,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	1189895	1491079	chr12:1189895-1491079	0	+	1189895	1410415	789624	9	157,136,132,161,145,99,65,189,987,	0,46873,73138,99956,181937,218253,220493,254666,300197,
#Partially deleted in new
chr12	1203965	1263073	chr12:1203965-1263073	0	+	1203965	1203965	8553170	4	131,12,136,40,	0,535,32803,59068,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	1257137	1371952	chr12:1257137-1371952	0	+	1257137	1257137	8553170	4	100,132,161,120,	0,5896,32714,114695,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	1380059	1391502	chr12:1380059-1391502	3	-	1380059	1380059	8553170	2	1174,914,	0,10529,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	1385832	1386987	chr12:1385832-1386987	3	+	1385832	1385832	8553170	2	170,404,	0,751,
#Partially deleted in new
chr12	1408191	1445055	chr12:1408191-1445055	0	+	1408191	1444774	789624	2	56,494,	0,36370,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	1430276	1444630	chr12:1430276-1444630	0	+	1430276	1430276	8553170	2	522,69,	0,14285,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	1443290	1491079	chr12:1443290-1491079	0	+	1443290	1443290	8553170	2	1460,987,	0,46802,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	1500524	1504424	chr12:1500524-1504424	3	+	1500524	1500524	789624	2	252,1958,	0,1942,
#Partially deleted in new
chr12	1529890	1639709	chr12:1529890-1639709	0	+	1631354	1639709	789624	4	119,137,248,26,	0,101407,102767,109793,
#Partially deleted in new
chr12	1530818	1639827	chr12:1530818-1639827	0	+	1631354	1639827	789624	4	132,137,248,144,	0,100479,101839,108865,
#Partially deleted in new
chr12	1565992	1594165	chr12:1565992-1594165	3	-	1566747	1594066	789624	2	818,1293,	0,26880,
#Partially deleted in new
chr12	1574656	1646367	chr12:1574656-1646367	3	+	1631354	1646252	789624	5	185,137,248,293,574,	0,56641,58001,65027,71137,
#Partially deleted in new
chr12	1587360	1593038	chr12:1587360-1593038	0	-	1587360	1587360	8553170	2	176,124,	0,5554,
#Partially deleted in new
chr12	1616659	1631323	chr12:1616659-1631323	0	+	1616659	1616659	8553170	2	484,26,	0,14638,
#Partially deleted in new
chr12	1617055	1647211	chr12:1617055-1647211	1	+	1631354	1646252	789624	5	88,137,248,293,1418,	0,14242,15602,22628,28738,
#Partially deleted in new
chr12	1629196	1647243	chr12:1629196-1647243	1	+	1631354	1646252	789624	5	175,137,248,293,1450,	0,2101,3461,10487,16597,
#Deleted in new
chr12	1629896	1632906	chr12:1629896-1632906	0	+	1629896	1629896	8553170	3	330,137,249,	0,1401,2761,
#Partially deleted in new
chr12	1630811	1645933	chr12:1630811-1645933	0	+	1631354	1645933	789624	4	623,248,293,140,	0,1846,8872,14982,
#Partially deleted in new
chr12	1631314	1645933	chr12:1631314-1645933	1	+	1631354	1645804	789624	3	120,248,140,	0,1343,14479,
#Partially deleted in new
chr12	1644796	1646533	chr12:1644796-1646533	0	+	1644796	1644796	8553170	2	265,740,	0,997,
#Deleted in new
chr12	1660314	1660380	chr12:1660314-1660380	3	-	1660314	1660314	5263520	1	66,	0,
#Partially deleted in new
chr12	1688573	1772924	chr12:1688573-1772924	0	+	1688573	1688573	8553170	3	144,257,83,	0,65684,84268,
#Partially deleted in new
chr12	1691026	1788678	chr12:1691026-1788678	3	+	1754343	1786072	0	8	165,257,120,172,187,188,194,2735,	0,63231,81815,86827,89424,89862,92853,94917,
#Partially deleted in new
chr12	1691162	1731056	chr12:1691162-1731056	0	+	1691162	1691162	8553170	3	51,97,332,	0,11723,39562,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	1695829	1698044	chr12:1695829-1698044	7	-	1695829	1695829	16724991	2	559,1420,	0,795,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	1741196	1747099	chr12:1741196-1747099	3	-	1741196	1741196	8553170	3	1907,1318,245,	0,3426,5658,
#Deleted in new
chr12	1757230	1758011	chr12:1757230-1758011	7	-	1757230	1757230	16724991	1	781,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	1760728	1777915	chr12:1760728-1777915	0	+	1760728	1760728	8553170	3	252,120,62,	0,12113,17125,
#Partially deleted in new
chr12	1772713	1780518	chr12:1772713-1780518	0	+	1772713	1772713	8553170	3	248,172,68,	0,5140,7737,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	1772922	1778607	chr12:1772922-1778607	0	+	1772922	1772922	8553170	2	39,754,	0,4931,
#Deleted in new
chr12	1780147	1780967	chr12:1780147-1780967	0	+	1780147	1780147	8553170	2	490,79,	0,741,
#Partially deleted in new
chr12	1791956	1918836	chr12:1791956-1918836	3	-	1793654	1918473	789624	38	1803,83,113,118,21,53,53,76,71,63,45,62,81,128,96,94,98,46,68,62,72,87,75,81,78,134,79,114,90,75,151,61,132,163,60,117,82,590,	0,3342,3711,5461,7718,8043,8429,9086,9617,18321,18586,19705,48782,52445,54637,61994,64055,64227,66620,68188,82647,83294,86358,86999,87847,90910,92286,92811,93030,94008,94266,95052,115483,115918,117949,121066,122897,126290,
#Partially deleted in new
chr12	1791962	1918666	chr12:1791962-1918666	0	-	1791962	1791962	8553170	36	1797,83,113,118,764,76,71,63,45,62,81,128,96,94,98,46,68,62,72,87,75,81,78,134,79,114,90,75,151,61,132,163,60,117,82,420,	0,3336,3705,5455,7712,9080,9611,18315,18580,19699,48776,52439,54631,61988,64049,64221,66614,68182,82641,83288,86352,86993,87841,90904,92280,92805,93024,94002,94260,95046,115477,115912,117943,121060,122891,126284,
#Partially deleted in new
chr12	1791962	1854037	chr12:1791962-1854037	0	-	1801103	1854037	789624	15	1797,83,113,118,21,53,53,76,63,45,62,81,128,96,87,	0,3336,3705,5455,7712,8037,8423,9080,18315,18580,19699,48776,52439,54631,61988,
#Partially deleted in new
chr12	1792772	1918637	chr12:1792772-1918637	0	-	1875302	1918473	789624	37	987,83,113,118,21,53,53,76,71,63,45,81,128,96,94,98,46,68,62,72,87,127,81,78,134,79,114,90,75,151,61,132,163,60,117,82,391,	0,2526,2895,4645,6902,7227,7613,8270,8801,17505,17770,47966,51629,53821,61178,63239,63411,65804,67372,81831,82478,85542,86183,87031,90094,91470,91995,92214,93192,93450,94236,114667,115102,117133,120250,122081,125474,
#Partially deleted in new
chr12	1792801	1811738	chr12:1792801-1811738	0	-	1801103	1811709	789624	10	958,83,113,118,21,53,53,76,63,77,	0,2497,2866,4616,6873,7198,7584,8241,17476,18860,
#Partially deleted in new
chr12	1793042	1811791	chr12:1793042-1811791	1	-	1793654	1811709	789624	11	717,83,113,118,21,53,53,76,71,63,130,	0,2256,2625,4375,6632,6957,7343,8000,8531,17235,18619,
#Partially deleted in new
chr12	1793168	1918531	chr12:1793168-1918531	1	-	1793654	1918473	789624	37	591,83,113,118,21,53,53,76,71,63,45,62,81,128,96,94,98,46,68,62,72,87,81,78,134,79,114,90,75,151,61,132,163,60,117,82,285,	0,2130,2499,4249,6506,6831,7217,7874,8405,17109,17374,18493,47570,51233,53425,60782,62843,63015,65408,66976,81435,82082,85787,86635,89698,91074,91599,91818,92796,93054,93840,114271,114706,116737,119854,121685,125078,
#Partially deleted in new
chr12	1793507	1811760	chr12:1793507-1811760	0	-	1801103	1811709	789624	11	252,83,113,118,21,53,53,76,63,45,99,	0,1791,2160,3910,6167,6492,6878,7535,16770,17035,18154,
#Partially deleted in new
chr12	1793522	1797660	chr12:1793522-1797660	0	-	1793522	1793522	8553170	4	237,83,113,243,	0,1776,2145,3895,
#Partially deleted in new
chr12	1793565	1915227	chr12:1793565-1915227	1	-	1793654	1915227	789624	38	194,83,113,118,21,53,53,76,71,63,45,62,81,128,96,94,98,46,68,62,72,87,75,81,78,134,79,114,90,75,151,61,132,163,60,117,82,35,	0,1733,2102,3852,6109,6434,6820,7477,8008,16712,16977,18096,47173,50836,53028,60385,62446,62618,65011,66579,81038,81685,84749,85390,86238,89301,90677,91202,91421,92399,92657,93443,113874,114309,116340,119457,121288,121627,
#Partially deleted in new
chr12	1793602	1811760	chr12:1793602-1811760	1	-	1793654	1811709	789624	12	157,83,113,118,21,53,53,76,71,63,45,99,	0,1696,2065,3815,6072,6397,6783,7440,7971,16675,16940,18059,
#Partially deleted in new
chr12	1793613	1811720	chr12:1793613-1811720	0	-	1793654	1811720	789624	12	146,83,113,118,21,53,53,70,71,63,45,59,	0,1685,2054,3804,6061,6386,6772,7435,7960,16664,16929,18048,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	1795059	1797557	chr12:1795059-1797557	0	-	1795059	1795059	8553170	3	322,113,140,	0,608,2358,
#Boundary problem: need 37, got 0, diff 37, mapped 0.0
chr12	1795108	1918473	chr12:1795108-1918473	1	-	1795142	1918473	789624	37	273,113,118,21,53,53,76,71,63,45,62,81,128,96,94,98,46,68,62,72,87,75,81,78,134,79,114,90,75,151,61,132,163,60,117,82,227,	0,559,2309,4566,4891,5277,5934,6465,15169,15434,16553,45630,49293,51485,58842,60903,61075,63468,65036,79495,80142,83206,83847,84695,87758,89134,89659,89878,90856,91114,91900,112331,112766,114797,117914,119745,123138,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	1795113	1795949	chr12:1795113-1795949	0	-	1795113	1795113	8553170	2	268,282,	0,554,
#Partially deleted in new
chr12	1795142	1915227	chr12:1795142-1915227	1	-	1795142	1915227	789624	37	239,113,118,21,53,53,76,71,63,45,62,81,128,96,94,98,46,68,62,72,87,75,81,78,134,79,114,90,75,151,61,132,163,60,117,82,35,	0,525,2275,4532,4857,5243,5900,6431,15135,15400,16519,45596,49259,51451,58808,60869,61041,63434,65002,79461,80108,83172,83813,84661,87724,89100,89625,89844,90822,91080,91866,112297,112732,114763,117880,119711,120050,
#Deleted in new
chr12	1795335	1797524	chr12:1795335-1797524	0	-	1795335	1795335	8553170	2	445,107,	0,2082,
#Partially deleted in new
chr12	1795672	1811740	chr12:1795672-1811740	0	-	1801103	1811709	789624	8	108,118,14,53,76,63,45,79,	0,1745,4002,4713,5370,14605,14870,15989,
#Partially deleted in new
chr12	1799675	1811727	chr12:1799675-1811727	0	-	1799675	1799675	8553170	6	377,53,76,63,45,66,	0,710,1367,10602,10867,11986,
#Deleted in new
chr12	1800006	1800756	chr12:1800006-1800756	0	-	1800006	1800006	8553170	2	432,144,	0,606,
#Partially deleted in new
chr12	1800179	1811761	chr12:1800179-1811761	0	-	1800179	1800179	8553170	4	259,76,63,100,	0,863,10098,11482,
#Partially deleted in new
chr12	1800206	1811770	chr12:1800206-1811770	0	-	1800206	1800206	8553170	6	232,76,71,63,45,109,	0,836,1367,10071,10336,11455,
#Partially deleted in new
chr12	1800227	1811798	chr12:1800227-1811798	0	-	1800227	1800227	8553170	5	211,76,71,63,137,	0,815,1346,10050,11434,
#Partially deleted in new
chr12	1809378	1918546	chr12:1809378-1918546	1	-	1809528	1918473	789624	26	189,63,45,62,81,128,96,94,98,46,68,62,87,75,81,78,120,114,90,35,132,163,60,117,82,300,	0,899,1164,2283,31360,35023,37215,44572,46633,46805,49198,50766,65872,68936,69577,70425,73488,75389,75608,76586,98061,98496,100527,103644,105475,108868,
#Partially deleted in new
chr12	1820266	1836752	chr12:1820266-1836752	3	+	1828148	1834721	789624	5	548,221,140,591,2486,	0,7143,7809,10668,14000,
#Partially deleted in new
chr12	1820482	1827728	chr12:1820482-1827728	0	+	1820482	1820482	8553170	2	332,322,	0,6924,
#Partially deleted in new
chr12	1820509	1827797	chr12:1820509-1827797	0	+	1820509	1820509	8553170	3	305,185,69,	0,6900,7219,
#Partially deleted in new
chr12	1820509	1836748	chr12:1820509-1836748	0	+	1820509	1820509	8553170	2	305,2482,	0,13757,
#Partially deleted in new
chr12	1820528	1836752	chr12:1820528-1836752	1	+	1828148	1834721	789624	5	286,185,140,591,2486,	0,6881,7547,10406,13738,
#Partially deleted in new
chr12	1820571	1830968	chr12:1820571-1830968	0	+	1820571	1820571	8553170	4	243,221,140,34,	0,6838,7504,10363,
#Partially deleted in new
chr12	1820573	1831230	chr12:1820573-1831230	0	+	1820573	1820573	8553170	2	241,296,	0,10361,
#Partially deleted in new
chr12	1820583	1827816	chr12:1820583-1827816	0	+	1820583	1820583	8553170	3	231,221,88,	0,6826,7145,
#Partially deleted in new
chr12	1820630	1836399	chr12:1820630-1836399	1	+	1828148	1834721	789624	5	184,188,140,591,2133,	0,6776,7445,10304,13636,
#Partially deleted in new
chr12	1822081	1831146	chr12:1822081-1831146	0	+	1828148	1831146	789624	4	60,185,140,212,	0,5328,5994,8853,
#Partially deleted in new
chr12	1823235	1831154	chr12:1823235-1831154	0	+	1828148	1831154	789624	4	42,185,140,220,	0,4174,4840,7699,
#Deleted in new
chr12	1827562	1831101	chr12:1827562-1831101	0	+	1827562	1827562	8553170	3	253,140,167,	0,513,3372,
#Partially deleted in new
chr12	1844424	1874627	chr12:1844424-1874627	0	-	1844424	1844424	8553170	7	105,96,98,46,68,62,24,	0,2169,11587,11759,14152,15720,30179,
#Deleted in new
chr12	1884029	1884879	chr12:1884029-1884879	0	-	1884029	1884029	8553170	2	292,112,	0,738,
#Partially deleted in new
chr12	1917950	1922867	chr12:1917950-1922867	3	+	1917950	1917950	8553170	2	79,236,	0,4681,
#Partially deleted in new
chr12	1929201	1936574	chr12:1929201-1936574	3	-	1929201	1929201	789624	2	2229,121,	0,7252,
#Partially deleted in new
chr12	1946053	2004511	chr12:1946053-2004511	3	-	1946205	2004431	789624	9	233,249,873,129,136,67,128,41,230,	0,3032,6362,9378,19504,21790,47210,51881,58228,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	1946151	2004470	chr12:1946151-2004470	0	-	1991205	2004431	789624	10	135,249,873,129,136,67,126,128,41,189,	0,2934,6264,9280,19406,21692,44969,47112,51783,58130,
#Partially deleted in new
chr12	1950035	1967910	chr12:1950035-1967910	1	-	1950350	1967851	789624	5	342,873,129,136,67,	0,2380,5396,15522,17808,
#Partially deleted in new
chr12	1952776	1966141	chr12:1952776-1966141	0	-	1952776	1952776	8553170	4	512,129,136,62,	0,2655,12781,13303,
#Partially deleted in new
chr12	1952776	2004467	chr12:1952776-2004467	0	-	1952776	1952776	8553170	4	512,128,41,267,	0,40487,45158,51424,
#Partially deleted in new
chr12	1961315	2004427	chr12:1961315-2004427	0	-	1961315	1961315	8553170	6	80,136,67,128,41,146,	0,4242,6528,31948,36619,42966,
#Partially deleted in new
chr12	1970785	2115384	chr12:1970785-2115384	0	+	1971062	2115384	789624	2	416,161,	0,144438,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	1991455	2004535	chr12:1991455-2004535	1	-	1993120	2004431	789624	3	1936,41,254,	0,6479,12826,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	2004665	2011392	chr12:2004665-2011392	3	+	2004665	2004665	8553170	2	71,558,	0,6169,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	2018212	2020532	chr12:2018212-2020532	3	+	2018212	2018212	8553170	2	80,607,	0,1713,
#Deleted in new
chr12	2048351	2049463	chr12:2048351-2049463	3	+	2048351	2048351	789624	2	259,330,	0,782,
#Partially deleted in new
chr12	2053297	2691410	chr12:2053297-2691410	1	+	2053562	2691199	789624	48	314,322,106,140,140,159,197,104,173,75,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,511,	0,61926,67027,395678,404269,432806,439892,451544,459514,494152,496645,503653,513124,514271,528292,529524,531205,532078,532537,539915,542576,543932,548556,551783,552381,553313,553686,555213,557243,558605,580999,595177,598342,600537,601849,611527,612283,613388,615635,621243,623796,624435,626146,629252,632438,632868,635149,637602,
#Partially deleted in new
chr12	2053297	2697950	chr12:2053297-2697950	1	+	2053562	2691199	789624	47	314,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,7051,	0,61926,67027,395678,404269,432806,439892,451544,459514,496645,503653,513124,514271,528292,529524,531205,532078,532537,539915,542576,543932,548556,551783,552381,553313,553686,555213,557243,558605,580999,595177,598342,600537,601849,611527,612283,613388,615635,621243,623796,624435,626146,629252,632438,632868,635149,637602,
#Partially deleted in new
chr12	2053537	2614971	chr12:2053537-2614971	1	+	2053562	2612025	789624	29	74,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,3069,	0,61686,66787,395438,404029,432566,439652,451304,459274,496405,503413,512884,514031,528052,529284,530965,531838,532297,539675,542336,543899,548316,551543,552141,553073,553446,554973,557003,558365,
#Partially deleted in new
chr12	2053562	2691293	chr12:2053562-2691293	1	+	2053562	2691199	789624	48	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,105,129,107,104,333,394,	0,61661,66762,395413,404004,432541,439627,451279,459249,496380,503388,512859,514006,528027,529259,530940,531813,532272,539650,542311,543874,548291,551518,552116,553048,553421,554948,556978,558340,580734,594912,598077,600272,601584,611262,612018,613123,615370,620978,623531,624170,625881,628387,628987,632173,632603,634884,637337,
#Partially deleted in new
chr12	2053562	2691293	chr12:2053562-2691293	1	+	2053562	2691199	789624	47	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,195,66,92,166,128,97,103,159,128,135,353,129,107,104,333,394,	0,61661,66762,395413,404004,432541,439627,451279,459249,496380,503388,512859,514006,528027,529259,530940,531813,532272,539650,542311,543667,548291,551518,552116,553048,553421,554948,556978,558340,580734,594912,598011,600272,601584,611262,612018,613123,615370,620921,623531,624170,625881,628987,632173,632603,634884,637337,
#Partially deleted in new
chr12	2053562	2691293	chr12:2053562-2691293	3	+	2053562	2691199	789624	49	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,60,107,88,108,53,147,202,159,111,84,84,33,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,394,	0,61661,66762,395413,404004,432541,439627,451279,459249,496380,503388,512859,514006,528027,529259,530940,531813,532272,539650,542311,543667,543874,548291,551518,552116,553048,553421,554948,556978,558340,580066,580734,594912,598077,600272,601584,611262,612018,613123,615370,620978,623531,624170,625881,628987,632173,632603,634884,637337,
#Partially deleted in new
chr12	2053562	2691293	chr12:2053562-2691293	1	+	2053562	2691199	789624	46	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,129,66,92,166,128,97,103,159,128,135,353,129,107,104,333,394,	0,61661,66762,395413,404004,432541,439627,451279,459249,496380,503388,512859,514006,528027,529259,530940,531813,532272,539650,542311,543874,548291,551518,552116,553048,553421,554948,556978,558340,580734,598077,600272,601584,611262,612018,613123,615370,620921,623531,624170,625881,628987,632173,632603,634884,637337,
#Partially deleted in new
chr12	2053562	2691293	chr12:2053562-2691293	1	+	2053562	2691199	789624	46	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,129,66,92,166,128,97,103,159,128,135,353,129,107,104,333,394,	0,61661,66762,395413,404004,432541,439627,451279,459249,496380,503388,512859,514006,528027,529259,530940,531813,532272,539650,542311,543667,548291,551518,552116,553048,553421,554948,556978,558340,580734,598077,600272,601584,611262,612018,613123,615370,620921,623531,624170,625881,628987,632173,632603,634884,637337,
#Partially deleted in new
chr12	2053562	2691293	chr12:2053562-2691293	1	+	2053562	2691199	789624	47	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,394,	0,61661,66762,395413,404004,432541,439627,451279,459249,496380,503388,512859,514006,528027,529259,530940,531813,532272,539650,542311,543667,548291,551518,552116,553048,553421,554948,556978,558340,580066,594912,598077,600272,601584,611262,612018,613123,615370,620978,623531,624170,625881,628987,632173,632603,634884,637337,
#Partially deleted in new
chr12	2053562	2691293	chr12:2053562-2691293	1	+	2053562	2691199	789624	47	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,394,	0,61661,66762,395413,404004,432541,439627,451279,459249,496380,503388,512859,514006,528027,529259,530940,531813,532272,539650,542311,543874,548291,551518,552116,553048,553421,554948,556978,558340,580734,594912,598077,600272,601584,611262,612018,613123,615370,620978,623531,624170,625881,628987,632173,632603,634884,637337,
#Partially deleted in new
chr12	2053562	2692159	chr12:2053562-2692159	1	+	2053562	2691199	789624	47	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,1260,	0,61661,66762,395413,404004,432541,439627,450873,459249,496380,503388,512859,514006,528027,529259,530940,531813,532272,539650,542311,543667,548291,551518,552116,553048,553421,554948,556978,558340,580066,594912,598077,600272,601584,611262,612018,613123,615370,620978,623531,624170,625881,628987,632173,632603,634884,637337,
#Partially deleted in new
chr12	2053562	2691293	chr12:2053562-2691293	1	+	2053562	2691199	789624	48	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,394,	0,61661,66762,395413,404004,432541,439627,451279,459249,496380,503388,512859,514006,528027,529259,530940,531813,532272,539650,542311,543667,543874,548291,551518,552116,553048,553421,554948,556978,558340,580734,594912,598077,600272,601584,611262,612018,613123,615370,620978,623531,624170,625881,628987,632173,632603,634884,637337,
#Partially deleted in new
chr12	2053562	2692159	chr12:2053562-2692159	1	+	2053562	2691199	789624	48	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,105,129,107,104,333,1260,	0,61661,66762,395413,404004,432541,439627,450873,459249,496380,503388,512859,514006,528027,529259,530940,531813,532272,539650,542311,543667,548291,551518,552116,553048,553421,554948,556978,558340,580066,594912,598077,600272,601584,611262,612018,613123,615370,620978,623531,624170,625881,628387,628987,632173,632603,634884,637337,
#Partially deleted in new
chr12	2053562	2691293	chr12:2053562-2691293	1	+	2053562	2691199	789624	47	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,159,128,135,353,129,107,104,333,394,	0,61661,66762,395413,404004,432541,439627,451279,459249,496380,503388,512859,514006,528027,529259,530940,531813,532272,539650,542311,543667,548291,551518,552116,553048,553421,554948,556978,558340,580734,594912,598077,600272,601584,611262,612018,613123,615370,620921,623531,624170,625881,628987,632173,632603,634884,637337,
#Partially deleted in new
chr12	2053562	2691293	chr12:2053562-2691293	1	+	2053562	2691199	789624	47	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,84,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,394,	0,61661,66762,395413,404004,432541,439627,451279,459249,496380,503388,512859,514006,528027,529259,530940,531813,532272,539650,542311,543874,548291,551518,552116,553048,553421,554948,556978,558340,580066,580734,598077,600272,601584,611262,612018,613123,615370,620978,623531,624170,625881,628987,632173,632603,634884,637337,
#Partially deleted in new
chr12	2053562	2692159	chr12:2053562-2692159	1	+	2053562	2691199	789624	48	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,213,129,107,104,333,1260,	0,61661,66762,395413,404004,432541,439627,450873,459249,496380,503388,512859,514006,528027,529259,530940,531813,532272,539650,542311,543667,548291,551518,552116,553048,553421,554948,556978,558340,580734,594912,598077,600272,601584,611262,612018,613123,615370,620978,623531,624170,625881,626800,628987,632173,632603,634884,637337,
#Partially deleted in new
chr12	2053562	2691293	chr12:2053562-2691293	1	+	2053562	2691199	789624	47	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,159,128,135,353,129,107,104,333,394,	0,61661,66762,395413,404004,432541,439627,451279,459249,496380,503388,512859,514006,528027,529259,530940,531813,532272,539650,542311,543874,548291,551518,552116,553048,553421,554948,556978,558340,580734,594912,598077,600272,601584,611262,612018,613123,615370,620921,623531,624170,625881,628987,632173,632603,634884,637337,
#Partially deleted in new
chr12	2053562	2691293	chr12:2053562-2691293	1	+	2053562	2691199	789624	48	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,84,33,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,394,	0,61661,66762,395413,404004,432541,439627,451279,459249,496380,503388,512859,514006,528027,529259,530940,531813,532272,539650,542311,543667,548291,551518,552116,553048,553421,554948,556978,558340,580066,580734,594912,598077,600272,601584,611262,612018,613123,615370,620978,623531,624170,625881,628987,632173,632603,634884,637337,
#Partially deleted in new
chr12	2053562	2691293	chr12:2053562-2691293	1	+	2053562	2691199	789624	47	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,394,	0,61661,66762,395413,404004,432541,439627,450873,459249,496380,503388,512859,514006,528027,529259,530940,531813,532272,539650,542311,543874,548291,551518,552116,553048,553421,554948,556978,558340,580734,594912,598077,600272,601584,611262,612018,613123,615370,620978,623531,624170,625881,628987,632173,632603,634884,637337,
#Partially deleted in new
chr12	2053562	2691293	chr12:2053562-2691293	1	+	2053562	2691199	789624	47	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,394,	0,61661,66762,395413,404004,432541,439627,451279,459249,496380,503388,512859,514006,528027,529259,530940,531813,532272,539650,542311,543874,548291,551518,552116,553048,553421,554948,556978,558340,580066,594912,598077,600272,601584,611262,612018,613123,615370,620978,623531,624170,625881,628987,632173,632603,634884,637337,
#Partially deleted in new
chr12	2053562	2691293	chr12:2053562-2691293	1	+	2053562	2691199	789624	46	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,78,129,66,92,166,128,97,103,159,128,135,353,129,107,104,333,394,	0,61661,66762,395413,404004,432541,439627,451279,459249,496380,503388,512859,514006,528027,529259,530940,531813,532272,539650,542311,543667,548291,551518,552116,553048,553421,554948,556978,558340,580734,598077,600272,601584,611262,612018,613123,615370,620921,623531,624170,625881,628987,632173,632603,634884,637337,
#Partially deleted in new
chr12	2053562	2691293	chr12:2053562-2691293	1	+	2053562	2691199	789624	47	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,159,128,135,353,129,107,104,333,394,	0,61661,66762,395413,404004,432541,439627,451279,459249,496380,503388,512859,514006,528027,529259,530940,531813,532272,539650,542311,543667,548291,551518,552116,553048,553421,554948,556978,558340,580066,594912,598077,600272,601584,611262,612018,613123,615370,620921,623531,624170,625881,628987,632173,632603,634884,637337,
#Partially deleted in new
chr12	2053562	2692159	chr12:2053562-2692159	1	+	2053562	2691199	789624	48	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,213,129,107,104,333,1260,	0,61661,66762,395413,404004,432541,439627,450873,459249,496380,503388,512859,514006,528027,529259,530940,531813,532272,539650,542311,543667,548291,551518,552116,553048,553421,554948,556978,558340,580066,594912,598077,600272,601584,611262,612018,613123,615370,620978,623531,624170,625881,626800,628987,632173,632603,634884,637337,
#Deleted in new
chr12	2217461	2217920	chr12:2217461-2217920	3	-	2217461	2217461	8553170	1	459,	0,
#Deleted in new
chr12	2220536	2223479	chr12:2220536-2223479	3	-	2220536	2220536	789624	4	318,81,221,115,	0,1078,1663,2828,
#Partially deleted in new
chr12	2269775	2288937	chr12:2269775-2288937	3	+	2269775	2269775	789624	3	166,186,270,	0,18243,18892,
#Partially deleted in new
chr12	2332860	2335702	chr12:2332860-2335702	3	-	2332860	2332860	8553170	3	800,231,515,	0,1070,2327,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	2440188	2457392	chr12:2440188-2457392	3	-	2440188	2440188	8553170	3	2983,82,126,	0,8964,17078,
#Partially deleted in new
chr12	2504435	2566582	chr12:2504435-2566582	0	+	2504435	2504435	8553170	6	104,173,91,113,27,161,	0,8376,45507,46108,52515,61986,
#Partially deleted in new
chr12	2582883	2596206	chr12:2582883-2596206	0	+	2582883	2596105	789624	6	59,115,121,70,133,333,	0,1619,2492,2951,10329,12990,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	2603349	2607440	chr12:2603349-2607440	3	-	2603349	2603349	8553170	2	424,20,	0,4071,
#Partially deleted in new
chr12	2607879	2610699	chr12:2607879-2610699	0	+	2607992	2610699	789624	3	184,202,159,	0,631,2661,
#Partially deleted in new
chr12	2641457	2651747	chr12:2641457-2651747	0	+	2641457	2641457	8553170	4	302,149,33,108,	0,4926,7017,10182,
#Partially deleted in new
chr12	2641466	2691267	chr12:2641466-2691267	1	+	2641741	2691199	789624	17	293,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,368,	0,10173,12368,13680,23358,24114,25219,27466,33074,35627,36266,37977,41083,44269,44699,46980,49433,
#Deleted in new
chr12	2651062	2655193	chr12:2651062-2655193	0	+	2651062	2651062	8553170	3	706,66,47,	0,2772,4084,
#Partially deleted in new
chr12	2659936	2660969	chr12:2659936-2660969	7	+	2659936	2659936	16724991	2	604,128,	0,905,
#Partially deleted in new
chr12	2666615	2677813	chr12:2666615-2677813	0	+	2666615	2666615	8553170	5	167,103,102,128,81,	0,2317,7925,10478,11117,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	2668499	2672220	chr12:2668499-2672220	3	-	2668499	2668499	789624	2	517,92,	0,3629,
#Partially deleted in new
chr12	2676000	2691118	chr12:2676000-2691118	3	-	2676000	2676000	789624	4	1897,71,173,50,	0,14139,14806,15068,
#Partially deleted in new
chr12	2689862	2691200	chr12:2689862-2691200	1	-	2689862	2689862	8553170	2	348,394,	0,944,
#Partially deleted in new
chr12	2689897	2691157	chr12:2689897-2691157	0	-	2689897	2689897	8553170	3	313,173,89,	0,909,1171,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	2695764	2795020	chr12:2695764-2795020	3	-	2695764	2695764	8553170	6	552,47,116,55,146,46,	0,10487,30705,76088,91577,99210,
#Deleted in new
chr12	2726399	2727050	chr12:2726399-2727050	7	-	2726399	2726399	16724991	1	651,	0,
#Deleted in new
chr12	2740092	2742855	chr12:2740092-2742855	3	+	2740092	2740092	8553170	3	109,107,351,	0,1981,2412,
#Partially deleted in new
chr12	2742625	2812902	chr12:2742625-2812902	0	-	2742625	2742625	789624	4	164,55,70,341,	0,29227,54251,69936,
#Deleted in new
chr12	2752596	2753132	chr12:2752596-2753132	7	-	2752596	2752596	16724991	1	536,	0,
#Partially deleted in new
chr12	2761199	2771670	chr12:2761199-2771670	5	-	2761199	2761199	16724991	5	100,143,160,145,24,	0,6176,6704,9109,10447,
#Partially deleted in new
chr12	2761199	2775658	chr12:2761199-2775658	7	-	2761199	2761199	16724991	10	100,143,160,145,45,67,85,87,64,103,	0,6176,6704,9109,10663,10935,11998,13064,13716,14356,
#Partially deleted in new
chr12	2781903	2782371	chr12:2781903-2782371	7	+	2781903	2781903	16724991	1	468,	0,
#Partially deleted in new
chr12	2786930	2787582	chr12:2786930-2787582	5	-	2786930	2786930	16724991	2	60,294,	0,358,
#Partially deleted in new
chr12	2787363	2794295	chr12:2787363-2794295	7	-	2787363	2787363	16724991	2	124,299,	0,6633,
#Partially deleted in new
chr12	2794952	2805423	chr12:2794952-2805423	3	+	2795139	2803258	0	10	292,145,143,121,157,91,84,186,240,2273,	0,2185,2776,3753,4135,4897,5086,5439,6164,8198,
#Deleted in new
chr12	2795068	2797282	chr12:2795068-2797282	0	+	2795139	2796315	789624	3	176,104,145,	0,1196,2069,
#Deleted in new
chr12	2795139	2796315	chr12:2795139-2796315	1	+	2795139	2796315	789624	2	105,51,	0,1125,
#Deleted in new
chr12	2795656	2797202	chr12:2795656-2797202	0	+	2795656	2795656	8553170	2	712,65,	0,1481,
#Deleted in new
chr12	2796680	2797871	chr12:2796680-2797871	0	+	2797167	2797871	789624	3	284,145,143,	0,457,1048,
#Partially deleted in new
chr12	2796876	2812902	chr12:2796876-2812902	3	-	2796876	2796876	8553170	2	70,341,	0,15685,
#Partially deleted in new
chr12	2797135	2803938	chr12:2797135-2803938	3	-	2797135	2797135	8553170	2	137,150,	0,6653,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	2798766	2800465	chr12:2798766-2800465	0	+	2798766	2798766	8553170	4	478,91,84,74,	0,1083,1272,1625,
#Deleted in new
chr12	2801177	2801803	chr12:2801177-2801803	0	+	2801177	2801687	789624	2	179,191,	0,435,
#Partially deleted in new
chr12	2803196	2805410	chr12:2803196-2805410	0	+	2803196	2805194	789624	2	44,243,	0,1971,
#Partially deleted in new
chr12	2805130	2812816	chr12:2805130-2812816	1	-	2805130	2805130	8553170	2	187,255,	0,7431,
#Partially deleted in new
chr12	2805133	2812381	chr12:2805133-2812381	0	-	2805133	2805133	8553170	2	184,163,	0,7085,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	2812621	2825071	chr12:2812621-2825071	3	+	2812760	2824193	789624	12	235,96,42,172,140,149,98,54,101,118,174,982,	0,4601,5287,5484,7464,8102,8640,8921,9070,10172,11148,11468,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	2812621	2859791	chr12:2812621-2859791	0	+	2812760	2830234	789624	7	235,36,669,212,154,320,258,	0,4601,17595,24123,28220,45390,46912,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr12	2812621	2859791	chr12:2812621-2859791	0	+	2812760	2818315	789624	17	235,96,42,248,140,149,98,54,101,118,174,163,669,212,154,320,258,	0,4601,5287,5484,7464,8102,8640,8921,9070,10172,11148,11468,17595,24123,28220,45390,46912,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	2812680	2818660	chr12:2812680-2818660	0	+	2812680	2812680	8553170	3	176,728,555,	0,4542,5425,
#Partially deleted in new
chr12	2812684	2824502	chr12:2812684-2824502	0	+	2812760	2820160	789624	9	172,140,149,98,54,101,118,174,413,	0,7401,8039,8577,8858,9007,10109,11085,11405,
#Partially deleted in new
chr12	2812692	2830604	chr12:2812692-2830604	0	+	2812760	2818315	789624	13	164,96,42,248,140,149,98,54,101,118,174,163,388,	0,4530,5216,5413,7393,8031,8569,8850,8999,10101,11077,11397,17524,
#Partially deleted in new
chr12	2812760	2818458	chr12:2812760-2818458	0	+	2812760	2812760	8553170	4	96,96,42,353,	0,4462,5148,5345,
#Partially deleted in new
chr12	2817229	2824672	chr12:2817229-2824672	0	+	2817229	2817229	8553170	2	29,420,	0,7023,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	2817229	2859791	chr12:2817229-2859791	0	+	2817229	2817229	8553170	16	89,42,248,140,149,98,54,101,118,174,163,52,212,154,320,258,	0,679,876,2856,3494,4032,4313,4462,5564,6540,6860,13604,19515,23612,40782,42304,
#Partially deleted in new
chr12	2819657	2822911	chr12:2819657-2822911	0	+	2819657	2819657	8553170	6	568,149,98,54,101,118,	0,1066,1604,1885,2034,3136,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	2820087	2859790	chr12:2820087-2859790	0	+	2820087	2820087	8553170	12	138,149,98,54,101,118,244,163,52,212,320,257,	0,636,1174,1455,1604,2706,3682,4002,10746,16657,37924,39446,
#Deleted in new
chr12	2822793	2824941	chr12:2822793-2824941	0	+	2822793	2824193	789624	4	118,174,163,260,	0,976,1296,1888,
#Deleted in new
chr12	2823841	2824476	chr12:2823841-2824476	0	+	2823841	2824096	789624	2	172,387,	0,248,
#Partially deleted in new
chr12	2823875	2830894	chr12:2823875-2830894	0	+	2823875	2824193	789624	3	68,163,61,	0,214,6958,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	2825347	2835024	chr12:2825347-2835024	3	-	2827206	2834983	789624	6	1952,53,122,83,153,383,	0,2277,2578,2984,5360,9294,
#Partially deleted in new
chr12	2827949	2835544	chr12:2827949-2835544	0	-	2827949	2834833	789624	5	98,83,153,200,57,	0,382,2758,6692,7538,
#Partially deleted in new
chr12	2828345	2835536	chr12:2828345-2835536	0	-	2828345	2834833	789624	4	69,153,307,49,	0,2362,6296,7142,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	2830424	2836992	chr12:2830424-2836992	0	+	2830424	2830424	8553170	2	461,248,	0,6320,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	2836810	2859791	chr12:2836810-2859791	0	+	2836810	2836810	5263520	4	146,154,320,258,	0,4031,21201,22723,
#Partially deleted in new
chr12	2849038	2857083	chr12:2849038-2857083	3	-	2849230	2857026	789624	3	487,551,129,	0,5857,7916,
#Deleted in new
chr12	2857251	2857682	chr12:2857251-2857682	0	+	2857251	2857251	8553170	2	227,51,	0,380,
#Deleted in new
chr12	2857287	2859791	chr12:2857287-2859791	0	+	2857287	2857287	8553170	2	1044,258,	0,2246,
#Partially deleted in new
chr12	2857680	2864854	chr12:2857680-2864854	0	-	2857680	2857680	8553170	2	1983,535,	0,6639,
#Partially deleted in new
chr12	2857680	2877155	chr12:2857680-2877155	1	-	2858637	2874478	789624	8	1983,176,73,129,192,149,549,236,	0,6639,7002,8712,10882,14415,16296,19239,
#Partially deleted in new
chr12	2857682	2876986	chr12:2857682-2876986	3	-	2858637	2874478	0	10	1981,114,176,70,45,129,192,152,549,67,	0,3616,6637,7000,7672,8710,10880,14413,16294,19237,
#Partially deleted in new
chr12	2857682	2877040	chr12:2857682-2877040	1	-	2858637	2874478	0	8	1981,176,70,129,192,152,549,121,	0,6637,7000,8710,10880,14413,16294,19237,
#Partially deleted in new
chr12	2857683	2876941	chr12:2857683-2876941	1	-	2858637	2874478	0	9	1980,176,70,45,129,192,152,549,22,	0,6636,6999,7671,8709,10879,14412,16293,19236,
#Partially deleted in new
chr12	2859487	2868581	chr12:2859487-2868581	0	-	2859487	2868581	789624	6	176,176,73,45,129,19,	0,4832,5195,5867,6905,9075,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	2863748	2864710	chr12:2863748-2864710	0	-	2863748	2863748	8553170	2	747,28,	0,934,
#Partially deleted in new
chr12	2864431	2874214	chr12:2864431-2874214	0	-	2868749	2874214	789624	5	64,70,129,192,238,	0,251,1961,4131,9545,
#Partially deleted in new
chr12	2864884	2874137	chr12:2864884-2874137	0	-	2864884	2864884	8553170	6	61,45,129,192,152,161,	0,470,1508,3678,7211,9092,
#Partially deleted in new
chr12	2868230	2874200	chr12:2868230-2874200	0	-	2868230	2868230	8553170	3	524,152,224,	0,3865,5746,
#Partially deleted in new
chr12	2876257	2888168	chr12:2876257-2888168	0	+	2876257	2876257	8553170	2	258,258,	0,11653,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	2877198	2889271	chr12:2877198-2889271	1	+	2885366	2888459	789624	3	84,210,1361,	0,8084,10712,
#Partially deleted in new
chr12	2877198	2888137	chr12:2877198-2888137	0	+	2885366	2888137	789624	3	84,272,227,	0,8064,10712,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	2877198	2889523	chr12:2877198-2889523	3	+	2885366	2888459	789624	3	84,373,1613,	0,7963,10712,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	2877207	2889440	chr12:2877207-2889440	0	+	2877207	2877207	789624	2	75,1530,	0,10703,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	2877214	2889460	chr12:2877214-2889460	1	+	2885366	2888459	789624	3	68,252,1550,	0,8068,10696,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	2877222	2887934	chr12:2877222-2887934	0	+	2885366	2887934	789624	4	60,181,252,24,	0,710,8060,10688,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	2877222	2888007	chr12:2877222-2888007	0	+	2885366	2886989	789624	4	60,252,134,97,	0,8060,9755,10688,
#Partially deleted in new
chr12	2877222	2888057	chr12:2877222-2888057	0	+	2885366	2888057	789624	3	60,373,147,	0,7939,10688,
#Partially deleted in new
chr12	2877222	2934562	chr12:2877222-2934562	0	+	2909544	2931080	789624	9	60,52,160,141,98,34,204,113,116,	0,32306,43540,45039,53025,53683,53814,56195,57224,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	2885818	2886329	chr12:2885818-2886329	3	+	2885818	2885818	8553170	2	79,377,	0,134,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	2888000	2889008	chr12:2888000-2889008	0	+	2888000	2888000	8553170	1	1008,	0,
#Partially deleted in new
chr12	2890886	2939345	chr12:2890886-2939345	0	+	2934456	2939345	789624	6	30,97,115,99,172,35,	0,42547,43560,46744,47227,48424,
#Partially deleted in new
chr12	2890890	2939560	chr12:2890890-2939560	0	+	2890947	2922288	789624	9	98,52,141,98,204,115,99,172,250,	0,18638,31371,39357,40146,43556,46740,47223,48420,
#Partially deleted in new
chr12	2890890	2939788	chr12:2890890-2939788	0	+	2890947	2922288	789624	8	98,52,141,204,113,115,172,478,	0,18638,31371,40146,42527,43556,47223,48420,
#Partially deleted in new
chr12	2890896	2941140	chr12:2890896-2941140	3	+	2890947	2939444	789624	11	92,52,160,141,98,204,113,115,99,172,1830,	0,18632,29866,31365,39351,40140,42521,43550,46734,47217,48414,
#Partially deleted in new
chr12	2890906	2941130	chr12:2890906-2941130	1	+	2890947	2940726	789624	12	82,52,160,141,98,204,113,115,99,172,114,601,	0,18622,29856,31355,39341,40130,42511,43540,46724,47207,48404,49623,
#Partially deleted in new
chr12	2937677	2940338	chr12:2937677-2940338	0	+	2937677	2940196	789624	5	52,172,114,60,144,	0,436,1633,2344,2517,
#Partially deleted in new
chr12	2937710	2940338	chr12:2937710-2940338	0	+	2937710	2940217	789624	4	19,172,114,144,	0,403,1600,2484,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	2954239	2954338	chr12:2954239-2954338	3	-	2954239	2954239	8553170	1	99,	0,
#Partially deleted in new
chr12	2959329	3040665	chr12:2959329-3040665	3	+	2994766	3040478	789624	12	152,93,255,65,63,44,56,140,174,141,153,301,	0,618,35408,51674,52840,59215,59785,61304,62514,78638,80777,81035,
#Partially deleted in new
chr12	2959405	2994833	chr12:2959405-2994833	0	+	2994766	2994833	789624	3	76,406,96,	0,542,35332,
#Partially deleted in new
chr12	2959406	2994983	chr12:2959406-2994983	0	+	2994766	2994983	789624	3	75,249,246,	0,541,35331,
#Partially deleted in new
chr12	2959413	3040673	chr12:2959413-3040673	1	+	2994766	3040478	789624	13	68,93,255,65,63,129,44,56,140,174,141,153,309,	0,534,35324,51590,52756,57984,59131,59701,61220,62430,78554,80693,80951,
#Partially deleted in new
chr12	2959795	3018588	chr12:2959795-3018588	0	+	2994766	3018588	789624	6	245,255,65,63,129,44,	0,34942,51208,52374,57602,58749,
#Partially deleted in new
chr12	2959916	3040671	chr12:2959916-3040671	1	+	3017430	3040478	789624	11	124,65,63,129,44,56,140,174,141,153,307,	0,51087,52253,57481,58628,59198,60717,61927,78051,80190,80448,
#Partially deleted in new
chr12	2959943	3020759	chr12:2959943-3020759	0	+	2994766	3018588	789624	6	97,255,63,44,56,126,	0,34794,52226,58601,59171,60690,
#Partially deleted in new
chr12	3011043	3021920	chr12:3011043-3021920	0	+	3011043	3021920	789624	8	25,63,33,129,44,56,140,77,	0,1126,6019,6354,7501,8071,9590,10800,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	3041436	3044950	chr12:3041436-3044950	3	+	3041436	3041436	8553170	1	3514,	0,
#Deleted in new
chr12	3071531	3072145	chr12:3071531-3072145	7	-	3071531	3071531	16724991	1	614,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	3077354	3286564	chr12:3077354-3286564	3	+	3201193	3283116	789624	8	99,80,192,75,102,132,84,3520,	0,123822,201066,201637,203027,203843,204379,205690,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	3077376	3286558	chr12:3077376-3286558	1	+	3201193	3283116	789624	9	77,67,80,192,75,102,132,84,3514,	0,6276,123800,201044,201615,203005,203821,204357,205668,
#Partially deleted in new
chr12	3077376	3279006	chr12:3077376-3279006	0	+	3201193	3206396	789624	6	77,67,80,139,192,15,	0,6276,123800,128903,201044,201615,
#Partially deleted in new
chr12	3077384	3281756	chr12:3077384-3281756	0	+	3278549	3281756	8553170	7	69,67,192,75,102,132,23,	0,6268,201036,201607,202997,203813,204349,
#Partially deleted in new
chr12	3077427	3084210	chr12:3077427-3084210	0	+	3077427	3077427	8553170	2	26,558,	0,6225,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	3124776	3125063	chr12:3124776-3125063	3	+	3124776	3124776	8553170	1	287,	0,
#Deleted in new
chr12	3149796	3151476	chr12:3149796-3151476	3	+	3149796	3149796	8553170	2	70,492,	0,1188,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	3171656	3174056	chr12:3171656-3174056	3	+	3171656	3171656	8553170	1	2400,	0,
#Partially deleted in new
chr12	3199983	3278612	chr12:3199983-3278612	0	+	3200920	3278612	789624	2	1273,192,	0,78437,
#Partially deleted in new
chr12	3201176	3282108	chr12:3201176-3282108	1	+	3201193	3281985	789624	6	80,192,75,102,132,375,	0,77244,77815,79205,80021,80557,
#Deleted in new
chr12	3211662	3211917	chr12:3211662-3211917	7	-	3211662	3211662	16724991	1	255,	0,
#Partially deleted in new
chr12	3215250	3281281	chr12:3215250-3281281	0	+	3215250	3215250	8553170	5	105,192,75,102,84,	0,63170,63741,65131,65947,
#Partially deleted in new
chr12	3272911	3280471	chr12:3272911-3280471	0	+	3272911	3272911	8553170	4	335,192,75,90,	0,5509,6080,7470,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	3296201	3300224	chr12:3296201-3300224	5	-	3296201	3296201	16724991	2	2059,244,	0,3779,
#Partially deleted in new
chr12	3298209	3337202	chr12:3298209-3337202	5	-	3298209	3298209	16724991	7	53,67,156,105,71,189,84,	0,5127,5572,8554,9538,25114,38909,
#Partially deleted in new
chr12	3298658	3366122	chr12:3298658-3366122	7	-	3298658	3298658	16724991	6	2334,67,156,267,71,64,	0,4678,5123,8551,9089,67400,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	3298695	3366112	chr12:3298695-3366112	4	-	3298695	3298695	16724991	8	1746,147,67,156,267,71,583,54,	0,2150,4641,5086,8514,9052,33114,67363,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	3318717	3325343	chr12:3318717-3325343	3	+	3318717	3318717	8553170	2	1009,1995,	0,4631,
#Partially deleted in new
chr12	3319440	3325340	chr12:3319440-3325340	1	+	3319440	3319440	8553170	3	286,104,251,	0,3908,5649,
#Partially deleted in new
chr12	3367832	3371346	chr12:3367832-3371346	3	+	3367832	3367832	8553170	3	292,161,62,	0,432,3452,
#Partially deleted in new
chr12	3381348	3593182	chr12:3381348-3593182	1	+	3381394	3593182	0	10	94,186,156,64,143,88,116,151,122,84,	0,159257,168587,172302,187357,188128,195522,201709,210882,211750,
#Partially deleted in new
chr12	3462717	3463586	chr12:3462717-3463586	3	-	3462717	3462717	8553170	2	272,258,	0,611,
#Deleted in new
chr12	3468949	3469296	chr12:3468949-3469296	7	+	3468949	3468949	16724991	1	347,	0,
#Partially deleted in new
chr12	3491235	3593973	chr12:3491235-3593973	3	+	3491625	3593182	0	10	465,186,156,64,143,88,116,151,122,875,	0,49370,58700,62415,77470,78241,85635,91822,100995,101863,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	3491258	3593970	chr12:3491258-3593970	0	+	3491258	3491258	8553170	9	442,186,3779,143,88,116,151,122,872,	0,49347,58677,77447,78218,85612,91799,100972,101840,
#Partially deleted in new
chr12	3538213	3593973	chr12:3538213-3593973	0	+	3538213	3538213	8553170	12	494,186,156,132,64,143,88,131,116,88,122,875,	0,2392,11722,14489,15437,30492,31263,35737,38657,44907,54017,54885,
#Partially deleted in new
chr12	3606632	3673524	chr12:3606632-3673524	0	-	3648471	3673524	789624	15	998,505,77,102,115,82,133,334,107,46,254,188,96,91,79,	0,8302,10321,12638,20803,20992,26971,31491,35099,37962,41727,47579,49678,52931,66813,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	3610306	3612003	chr12:3610306-3612003	3	-	3610306	3610306	8553170	1	1697,	0,
#Partially deleted in new
chr12	3615327	3753102	chr12:3615327-3753102	3	-	3615354	3696999	789624	20	112,77,102,115,82,133,331,107,46,72,188,96,91,147,184,112,264,81,269,88,	0,1626,3943,12108,12297,18276,22796,26404,29267,33214,38884,40983,44236,58118,63587,64910,81444,97909,117614,137687,
#Partially deleted in new
chr12	3640386	3654223	chr12:3640386-3654223	0	-	3640661	3654223	789624	5	393,107,46,72,12,	0,1345,4208,8155,13825,
#Partially deleted in new
chr12	3647942	3753097	chr12:3647942-3753097	1	-	3648471	3696999	789624	11	671,188,96,91,147,184,112,264,81,269,83,	0,6269,8368,11621,25503,30972,32295,48829,65294,84999,105072,
#Duplicated in new
chr12	3725911	3764819	chr12:3725911-3764819	0	-	3725911	3725911	8553170	2	7299,255,	0,38653,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	3726221	3726327	chr12:3726221-3726327	3	-	3726221	3726221	8553170	1	106,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	3730885	3753200	chr12:3730885-3753200	0	-	3730885	3730885	8553170	2	2325,186,	0,22129,
#Partially deleted in new
chr12	3752517	3757842	chr12:3752517-3757842	3	+	3752517	3752517	8553170	2	116,446,	0,4879,
#Deleted in new
chr12	3756557	3757842	chr12:3756557-3757842	0	+	3756557	3756557	8553170	2	151,147,	0,1138,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	3791046	3873436	chr12:3791046-3873436	0	-	3807083	3873229	0	10	1127,178,216,152,131,73,76,121,129,225,	0,7612,15841,22990,30826,31038,35111,37863,38843,82165,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	3808860	3873374	chr12:3808860-3873374	3	-	3812122	3873229	0	8	3579,152,131,73,76,121,129,163,	0,5176,13012,13224,17297,20049,21029,64351,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	3808860	3873355	chr12:3808860-3873355	1	-	3812122	3829914	0	8	3579,152,131,73,76,129,122,144,	0,5176,13012,13224,17297,21029,54975,64351,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	3808860	3873448	chr12:3808860-3873448	1	-	3812122	3829914	0	7	3579,152,131,73,76,129,237,	0,5176,13012,13224,17297,21029,64351,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	3808860	3873370	chr12:3808860-3873370	0	-	3826227	3873229	789624	7	3579,152,131,73,76,129,159,	0,5176,13012,13224,17297,21029,64351,
#Partially deleted in new
chr12	3811736	3821974	chr12:3811736-3821974	0	-	3811736	3811736	8553170	3	337,152,102,	0,2300,10136,
#Partially deleted in new
chr12	3812122	3873350	chr12:3812122-3873350	0	-	3815043	3873229	789624	9	317,152,59,131,73,76,121,129,139,	0,1914,2872,9750,9962,14035,16787,17767,61089,
#Partially deleted in new
chr12	3828973	3873442	chr12:3828973-3873442	0	-	3828973	3829972	789624	4	57,129,122,231,	0,916,34862,44238,
#Deleted in new
chr12	3839458	3842525	chr12:3839458-3842525	7	+	3839458	3839458	16724991	1	3067,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	3871583	3873036	chr12:3871583-3873036	1	+	3871583	3871583	8553170	2	373,655,	0,798,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	3871733	3910338	chr12:3871733-3910338	3	+	3871733	3871733	8553170	2	223,455,	0,38150,
#Partially deleted in new
chr12	3899052	3910306	chr12:3899052-3910306	0	+	3899052	3899052	8553170	2	135,423,	0,10831,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	3905219	3910270	chr12:3905219-3910270	0	+	3905219	3905219	8553170	2	162,387,	0,4664,
#Deleted in new
chr12	4025984	4026613	chr12:4025984-4026613	0	+	4025984	4025984	8553170	2	46,392,	0,237,
#Deleted in new
chr12	4097450	4099519	chr12:4097450-4099519	7	+	4097450	4097450	16724991	1	2069,	0,
#Partially deleted in new
chr12	4109660	4110215	chr12:4109660-4110215	5	-	4109660	4109660	16724991	1	555,	0,
#Partially deleted in new
chr12	4110027	4118132	chr12:4110027-4118132	7	-	4110027	4110027	16724991	2	253,245,	0,7860,
#Partially deleted in new
chr12	4248764	4276184	chr12:4248764-4276184	0	-	4248764	4248764	789624	2	429,126,	0,27294,
#Partially deleted in new
chr12	4248781	4275458	chr12:4248781-4275458	0	-	4248781	4248781	789624	4	412,105,819,163,	0,2658,3585,26514,
#Partially deleted in new
chr12	4248793	4275477	chr12:4248793-4275477	3	-	4248793	4248793	8553170	4	397,105,1669,182,	0,2646,3741,26502,
#Partially deleted in new
chr12	4248793	4253818	chr12:4248793-4253818	0	-	4248793	4248793	8553170	2	400,2379,	0,2646,
#Partially deleted in new
chr12	4252734	4275065	chr12:4252734-4275065	0	-	4252734	4252734	8553170	2	451,44,	0,22287,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	4273761	4405490	chr12:4273761-4405490	3	+	4274040	4331297	8553170	12	474,216,160,149,38,122,78,111,1362,122,152,451,	0,2243,4998,15080,57518,63277,76057,77505,78498,91898,92369,131278,
#Partially deleted in new
chr12	4273771	4305350	chr12:4273771-4305350	3	+	4274040	4300009	0	5	464,216,160,149,5491,	0,2233,4988,15070,26088,
#Partially deleted in new
chr12	4276063	4297968	chr12:4276063-4297968	0	+	4276063	4297950	789624	3	157,160,212,	0,2696,21693,
#Partially deleted in new
chr12	4278667	4289161	chr12:4278667-4289161	0	+	4278667	4278667	8553170	2	252,320,	0,10174,
#Partially deleted in new
chr12	4278799	4285476	chr12:4278799-4285476	0	+	4278799	4278799	8553170	2	120,202,	0,6475,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	4307762	4354549	chr12:4307762-4354549	1	+	4337145	4352691	789624	6	994,38,122,78,111,2290,	0,23517,29276,42056,43504,44497,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	4321204	4354593	chr12:4321204-4354593	3	+	4321271	4352691	0	6	99,38,122,78,111,2334,	0,10075,15834,28614,30062,31055,
#Deleted in new
chr12	4323723	4324591	chr12:4323723-4324591	7	-	4323723	4323723	16724991	2	160,612,	0,256,
#Deleted in new
chr12	4324371	4324811	chr12:4324371-4324811	5	-	4324371	4324371	16724991	1	440,	0,
#Partially deleted in new
chr12	4324642	4331318	chr12:4324642-4331318	0	+	4324642	4324642	8553170	2	121,39,	0,6637,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	4335532	4352356	chr12:4335532-4352356	0	+	4335532	4335532	8553170	5	119,122,78,111,97,	0,1506,14286,15734,16727,
#Partially deleted in new
chr12	4368226	4379728	chr12:4368226-4379728	3	-	4370342	4379582	0	3	2557,104,357,	0,4367,11145,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	4370641	4374408	chr12:4370641-4374408	0	-	4370641	4370641	8553170	2	142,1815,	0,1952,
#Deleted in new
chr12	4428154	4428715	chr12:4428154-4428715	0	-	4428154	4428154	8553170	2	249,217,	0,344,
#Partially deleted in new
chr12	4428155	4444219	chr12:4428155-4444219	0	-	4428394	4444219	789624	2	248,87,	0,15977,
#Partially deleted in new
chr12	4434142	4445614	chr12:4434142-4445614	3	-	4434214	4445570	789624	3	249,104,390,	0,9990,11082,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	4487727	4538471	chr12:4487727-4538471	3	-	4489806	4536194	789624	14	2172,68,58,203,75,129,198,107,122,100,182,146,203,63,	0,2794,3449,12410,17578,29333,30330,31046,37526,37756,42141,46429,48289,50681,
#Partially deleted in new
chr12	4489414	4538508	chr12:4489414-4538508	1	-	4489806	4536194	789624	14	485,68,58,203,75,129,198,107,122,100,182,146,195,100,	0,1107,1762,10723,15891,27646,28643,29359,35839,36069,40454,44742,46602,48994,
#Partially deleted in new
chr12	4489794	4517106	chr12:4489794-4517106	0	-	4502459	4517106	789624	7	105,68,58,203,172,75,46,	0,727,1382,10343,12516,15511,27266,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	4500314	4509350	chr12:4500314-4509350	0	-	4500314	4500314	8553170	3	26,75,473,	0,4991,8563,
#Partially deleted in new
chr12	4517091	4538504	chr12:4517091-4538504	0	-	4517091	4525570	789624	8	98,198,107,122,100,182,146,96,	0,966,1682,8162,8392,12777,17065,21317,
#Partially deleted in new
chr12	4517105	4538443	chr12:4517105-4538443	0	-	4518230	4525570	789624	6	84,198,122,100,146,35,	0,952,8148,8378,17051,21303,
#Partially deleted in new
chr12	4524934	4529895	chr12:4524934-4529895	0	-	4524934	4524934	8553170	3	441,100,27,	0,549,4934,
#Partially deleted in new
chr12	4525516	4538508	chr12:4525516-4538508	0	-	4525516	4536053	789624	5	67,182,146,66,100,	0,4352,8640,10500,12892,
#Partially deleted in new
chr12	4534044	4538508	chr12:4534044-4538508	0	-	4534044	4534044	8553170	3	258,203,100,	0,1972,4364,
#Partially deleted in new
chr12	4538797	4548838	chr12:4538797-4548838	0	+	4538939	4543908	789624	6	159,50,149,110,87,152,	0,3086,4965,7511,9294,9889,
#Partially deleted in new
chr12	4538868	4556511	chr12:4538868-4556511	0	+	4538939	4548098	789624	7	88,50,142,87,150,165,159,	0,3015,4894,9223,9818,14114,17484,
#Partially deleted in new
chr12	4538882	4559019	chr12:4538882-4559019	0	+	4538939	4543908	789624	8	74,50,149,87,150,165,198,163,	0,3001,4880,9209,9804,14100,17470,19974,
#Partially deleted in new
chr12	4538882	4553039	chr12:4538882-4553039	0	+	4538939	4543908	789624	6	74,50,149,87,150,57,	0,3001,4880,9209,9804,14100,
#Partially deleted in new
chr12	4538889	4560047	chr12:4538889-4560047	1	+	4538939	4558993	789624	10	67,50,142,51,110,87,150,165,150,1191,	0,2994,4873,6892,7419,9202,9797,14093,17463,19967,
#Partially deleted in new
chr12	4538889	4560048	chr12:4538889-4560048	3	+	4538939	4558993	789624	9	67,50,142,110,87,150,165,150,1192,	0,2994,4873,7419,9202,9797,14093,17463,19967,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	4538889	4560018	chr12:4538889-4560018	0	+	4538939	4543908	789624	11	67,50,149,94,51,110,87,150,165,150,1162,	0,2994,4873,6329,6892,7419,9202,9797,14093,17463,19967,
#Partially deleted in new
chr12	4538889	4559330	chr12:4538889-4559330	0	+	4538939	4548098	789624	8	67,50,142,87,150,165,198,474,	0,2994,4873,9202,9797,14093,17463,19967,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	4538906	4548175	chr12:4538906-4548175	0	+	4538939	4545234	789624	7	50,50,142,94,51,110,84,	0,2977,4856,6312,6875,7402,9185,
#Partially deleted in new
chr12	4538929	4558970	chr12:4538929-4558970	1	+	4538939	4558901	789624	8	27,50,142,110,87,150,107,114,	0,2954,4833,7379,9162,9757,14053,19927,
#Partially deleted in new
chr12	4541883	4556499	chr12:4541883-4556499	0	+	4541883	4556499	789624	7	50,142,110,87,150,165,69,	0,1879,4425,6208,6803,11099,14547,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	4541884	4548770	chr12:4541884-4548770	0	+	4541884	4545234	789624	6	49,142,94,110,87,84,	0,1878,3334,4424,6207,6802,
#Partially deleted in new
chr12	4543783	4553265	chr12:4543783-4553265	0	+	4543783	4543783	8553170	5	121,110,87,150,283,	0,2525,4308,4903,9199,
#Partially deleted in new
chr12	4550514	4559682	chr12:4550514-4559682	0	+	4550514	4550514	8553170	3	33,165,826,	0,2468,8342,
#Partially deleted in new
chr12	4562203	4613874	chr12:4562203-4613874	1	+	4562245	4613753	789624	15	80,94,81,111,139,164,137,141,139,82,173,61,130,176,360,	0,5751,26733,28126,28956,30798,33945,34385,36824,37503,42710,45123,47951,50339,51311,
#Partially deleted in new
chr12	4562209	4591160	chr12:4562209-4591160	0	+	4562245	4580871	789624	7	74,94,27,154,81,111,404,	0,5745,11120,18614,26727,28120,28547,
#Partially deleted in new
chr12	4562213	4590384	chr12:4562213-4590384	0	+	4562245	4580871	789624	5	70,94,154,81,55,	0,5741,18610,26723,28116,
#Partially deleted in new
chr12	4562222	4591160	chr12:4562222-4591160	0	+	4562245	4563150	789624	7	61,120,118,94,81,111,404,	0,834,2158,5732,26714,28107,28534,
#Partially deleted in new
chr12	4567316	4590500	chr12:4567316-4590500	0	+	4567316	4567316	8553170	5	67,94,27,81,171,	0,638,6013,21620,23013,
#Partially deleted in new
chr12	4567954	4573198	chr12:4567954-4573198	0	+	4567954	4567954	8553170	2	94,353,	0,4891,
#Partially deleted in new
chr12	4590077	4615302	chr12:4590077-4615302	3	+	4591180	4613753	789624	13	28,111,139,164,137,141,139,82,173,61,130,176,1791,	0,252,1082,2924,6071,6511,8950,9629,14836,17249,20077,22465,23434,
#Partially deleted in new
chr12	4590098	4597173	chr12:4590098-4597173	0	+	4590098	4590098	789624	6	109,225,139,164,297,585,	0,231,1061,2903,6050,6490,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	4590100	4591818	chr12:4590100-4591818	0	+	4590100	4590100	8553170	3	101,225,659,	0,229,1059,
#Partially deleted in new
chr12	4590319	4613888	chr12:4590319-4613888	1	+	4591180	4613753	789624	12	121,139,164,137,141,139,82,173,61,130,176,377,	0,840,2682,5829,6269,8708,9387,14594,17007,19835,22223,23192,
#Partially deleted in new
chr12	4590352	4592705	chr12:4590352-4592705	0	+	4590352	4590352	8553170	3	88,139,188,	0,807,2165,
#Partially deleted in new
chr12	4599624	4607389	chr12:4599624-4607389	0	+	4599624	4599624	8553170	3	164,173,63,	0,5289,7702,
#Deleted in new
chr12	4601990	4603420	chr12:4601990-4603420	7	-	4601990	4601990	16724991	1	1430,	0,
#Partially deleted in new
chr12	4604896	4613873	chr12:4604896-4613873	0	+	4604896	4604896	8553170	4	190,130,176,359,	0,5258,7646,8618,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	4604943	4662643	chr12:4604943-4662643	3	+	4604943	4631333	789624	7	143,61,171,98,92,142,111,	0,26378,49348,49881,52804,54092,57589,
#Partially deleted in new
chr12	4604956	4610523	chr12:4604956-4610523	0	+	4604956	4604956	8553170	3	130,61,369,	0,2370,5198,
#Deleted in new
chr12	4609938	4613576	chr12:4609938-4613576	0	+	4609938	4609938	8553170	3	346,176,65,	0,2604,3573,
#Deleted in new
chr12	4610155	4612883	chr12:4610155-4612883	0	+	4610155	4612774	789624	2	129,341,	0,2387,
#Deleted in new
chr12	4612516	4613823	chr12:4612516-4613823	0	+	4612516	4612516	8553170	2	202,312,	0,995,
#Partially deleted in new
chr12	4615507	4649047	chr12:4615507-4649047	3	-	4615738	4638196	789624	6	387,2310,96,106,138,281,	0,10988,22593,26391,29547,33259,
#Partially deleted in new
chr12	4615508	4649047	chr12:4615508-4649047	1	-	4615738	4638196	789624	6	386,2310,96,106,138,303,	0,10987,22592,26390,29546,33236,
#Partially deleted in new
chr12	4628416	4645200	chr12:4628416-4645200	0	-	4628416	4638196	789624	3	389,96,146,	0,9684,16638,
#Partially deleted in new
chr12	4628611	4645157	chr12:4628611-4645157	0	-	4628611	4638196	789624	4	194,96,135,103,	0,9489,13287,16443,
#Partially deleted in new
chr12	4635348	4636140	chr12:4635348-4636140	7	-	4635348	4635348	16724991	2	487,144,	0,648,
#Partially deleted in new
chr12	4641898	4649047	chr12:4641898-4649047	0	-	4641898	4641898	8553170	3	106,138,303,	0,3156,6846,
#Partially deleted in new
chr12	4641985	4649008	chr12:4641985-4649008	0	-	4641985	4641985	8553170	2	19,555,	0,6468,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	4645495	4648027	chr12:4645495-4648027	3	+	4645495	4645495	8553170	2	380,192,	0,2340,
#Partially deleted in new
chr12	4649094	4668538	chr12:4649094-4668538	0	+	4649094	4649094	8553170	5	81,92,142,103,82,	0,8653,9941,13438,19362,
#Partially deleted in new
chr12	4649100	4774184	chr12:4649100-4774184	3	+	4649126	4772597	8553170	15	75,171,98,92,142,103,68,77,96,67,186,138,96,168,1740,	0,5191,5724,8647,9935,13432,19356,20640,33104,36158,111857,114152,114851,116278,123344,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	4649106	4694317	chr12:4649106-4694317	3	+	4649126	4687108	0	11	69,171,98,92,142,103,68,77,96,67,7380,	0,5185,5718,8641,9929,13426,19350,20634,33098,36152,37831,
#Partially deleted in new
chr12	4649114	4655950	chr12:4649114-4655950	0	+	4649114	4649114	8553170	4	61,171,98,218,	0,5177,5710,6618,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	4649116	4668710	chr12:4649116-4668710	0	+	4649116	4649116	8553170	8	59,171,98,92,142,103,118,254,	0,5175,5708,8631,9919,13416,18420,19340,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	4649118	4655378	chr12:4649118-4655378	0	+	4649118	4649118	8553170	3	57,171,554,	0,5173,5706,
#Partially deleted in new
chr12	4653500	4657812	chr12:4653500-4657812	0	+	4653563	4657812	789624	4	178,171,98,65,	0,791,1324,4247,
#Partially deleted in new
chr12	4657173	4668475	chr12:4657173-4668475	0	+	4657173	4657173	8553170	4	666,142,103,19,	0,1862,5359,11283,
#Partially deleted in new
chr12	4657372	4682307	chr12:4657372-4682307	0	+	4657372	4657372	8553170	5	467,142,68,77,103,	0,1663,11084,12368,24832,
#Partially deleted in new
chr12	4657633	4726806	chr12:4657633-4726806	0	+	4657633	4657633	8553170	6	206,142,68,77,96,275,	0,1402,10823,12107,24571,68898,
#Partially deleted in new
chr12	4669740	4744581	chr12:4669740-4744581	0	+	4669740	4726543	789624	6	77,96,67,298,167,65,	0,12464,15518,56791,69422,74776,
#Deleted in new
chr12	4684979	4687233	chr12:4684979-4687233	1	+	4685085	4687108	789624	2	346,296,	0,1958,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	4700416	4720102	chr12:4700416-4720102	3	-	4700416	4700416	789624	4	763,128,120,238,	0,2896,3761,19448,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	4720340	4772726	chr12:4720340-4772726	3	+	4720677	4772597	789624	11	548,298,167,184,198,115,186,138,96,168,282,	0,6191,18822,24176,25088,25803,40617,42912,43611,45038,52104,
#Partially deleted in new
chr12	4746417	4773144	chr12:4746417-4773144	0	+	4746417	4746417	8553170	6	25,186,138,96,168,700,	0,14540,16835,17534,18961,26027,
#Partially deleted in new
chr12	4763343	4851003	chr12:4763343-4851003	0	+	4763343	4850911	789624	4	47,96,168,266,	0,608,2035,87394,
#Partially deleted in new
chr12	4763967	4768476	chr12:4763967-4768476	0	+	4763967	4768459	789624	3	80,168,35,	0,1411,4474,
#Partially deleted in new
chr12	4806541	4808641	chr12:4806541-4808641	3	-	4806541	4806541	8553170	2	327,122,	0,1978,
#Deleted in new
chr12	4809175	4813412	chr12:4809175-4813412	3	+	4810041	4811631	789624	1	4237,	0,
#Partially deleted in new
chr12	4809175	4851111	chr12:4809175-4851111	1	+	4810041	4811631	789624	2	5603,374,	0,41562,
#Partially deleted in new
chr12	4814336	4851927	chr12:4814336-4851927	0	+	4814336	4814336	8553170	2	442,1190,	0,36401,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	4838954	4842675	chr12:4838954-4842675	3	+	4838954	4838954	8553170	2	407,153,	0,3568,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	4909900	5011745	chr12:4909900-5011745	1	+	4909900	4909900	8553170	2	572,1596,	0,100249,
#Deleted in new
chr12	4909904	4918256	chr12:4909904-4918256	3	+	4911378	4912866	0	2	568,7417,	0,935,
#Partially deleted in new
chr12	4910104	5025990	chr12:4910104-5025990	1	+	4910104	4910104	8553170	8	368,73,182,155,204,98,114,897,	0,107970,108756,111583,112386,113419,113687,114989,
#Partially deleted in new
chr12	4910367	4931361	chr12:4910367-4931361	1	+	4910367	4910367	8553170	3	105,87,289,	0,20339,20705,
#Deleted in new
chr12	4910367	4918186	chr12:4910367-4918186	0	+	4910367	4910367	8553170	2	105,401,	0,7418,
#Deleted in new
chr12	4911540	4918220	chr12:4911540-4918220	0	+	4911540	4912866	789624	2	2183,435,	0,6245,
#Deleted in new
chr12	4912190	4918204	chr12:4912190-4918204	0	+	4912190	4913679	789624	3	76,83,419,	0,1450,5595,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	4960112	4963450	chr12:4960112-4963450	3	+	4960112	4960112	8553170	3	1499,41,156,	0,2362,3182,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	4978850	5025594	chr12:4978850-5025594	1	+	4978850	4978850	8553170	5	581,122,204,114,501,	0,2310,43640,44941,46243,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	4978868	4981540	chr12:4978868-4981540	1	+	4978868	4978868	8553170	3	563,86,380,	0,821,2292,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	4978869	5025590	chr12:4978869-5025590	1	+	4978869	4978869	8553170	6	562,122,81,204,114,497,	0,2291,42818,43621,44922,46224,
#Partially deleted in new
chr12	5013653	5025590	chr12:5013653-5025590	1	+	5013653	5013653	8553170	6	292,81,204,98,114,497,	0,8034,8837,9870,10138,11440,
#Partially deleted in new
chr12	5013671	5025590	chr12:5013671-5025590	1	+	5013671	5013671	8553170	5	274,155,204,114,497,	0,8016,8819,10120,11422,
#Partially deleted in new
chr12	5013710	5025590	chr12:5013710-5025590	1	+	5013710	5013710	8553170	6	235,155,204,98,114,497,	0,7977,8780,9813,10081,11383,
#Partially deleted in new
chr12	5016237	5025552	chr12:5016237-5025552	0	+	5016237	5016237	8553170	7	1910,80,182,81,204,114,459,	0,2064,2623,5450,6253,7554,8856,
#Partially deleted in new
chr12	5016513	5025594	chr12:5016513-5025594	0	+	5016513	5016513	8553170	5	2529,81,204,114,501,	0,5174,5977,7278,8580,
#Partially deleted in new
chr12	5017875	5025554	chr12:5017875-5025554	0	+	5017875	5017875	8553170	6	272,182,155,204,114,461,	0,985,3812,4615,5916,7218,
#Partially deleted in new
chr12	5018228	5025595	chr12:5018228-5025595	1	+	5018228	5018228	8553170	7	153,182,155,204,98,114,502,	0,632,3459,4262,5295,5563,6865,
#Partially deleted in new
chr12	5018228	5025594	chr12:5018228-5025594	1	+	5018228	5018228	8553170	6	153,182,81,204,114,501,	0,632,3459,4262,5563,6865,
#Partially deleted in new
chr12	5018237	5025590	chr12:5018237-5025590	1	+	5018237	5018237	8553170	7	144,74,81,204,98,114,497,	0,731,3450,4253,5286,5554,6856,
#Partially deleted in new
chr12	5018309	5025598	chr12:5018309-5025598	1	+	5018309	5018309	8553170	5	733,155,204,114,505,	0,3378,4181,5482,6784,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	5018457	5025559	chr12:5018457-5025559	0	+	5018457	5018457	8553170	4	585,1007,114,466,	0,3230,5334,6636,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	5021386	5025590	chr12:5021386-5025590	0	+	5021386	5021386	8553170	3	1308,114,497,	0,2405,3707,
#Deleted in new
chr12	5023391	5025613	chr12:5023391-5025613	0	+	5023391	5023391	8553170	2	514,520,	0,1702,
#Deleted in new
chr12	5032387	5032941	chr12:5032387-5032941	7	-	5032387	5032387	16724991	1	554,	0,
#Deleted in new
chr12	5043988	5046788	chr12:5043988-5046788	3	+	5044147	5045989	789624	1	2800,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	5088001	5092742	chr12:5088001-5092742	3	+	5088001	5088001	8553170	2	69,2839,	0,1902,
#Partially deleted in new
chr12	5233996	5240103	chr12:5233996-5240103	3	-	5233996	5233996	789624	4	340,81,117,216,	0,3007,4210,5891,
#Partially deleted in new
chr12	5234417	5240105	chr12:5234417-5240105	0	-	5234417	5234417	8553170	4	210,81,117,218,	0,2586,3789,5470,
#Partially deleted in new
chr12	5234673	5238272	chr12:5234673-5238272	0	-	5234673	5234673	8553170	3	177,81,66,	0,2330,3533,
#Partially deleted in new
chr12	5238047	5243151	chr12:5238047-5243151	1	-	5238047	5238047	789624	3	276,225,84,	0,1840,5020,
#Deleted in new
chr12	5315960	5319347	chr12:5315960-5319347	3	+	5315960	5315960	8553170	1	3387,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	5366047	5367774	chr12:5366047-5367774	3	-	5366047	5366047	8553170	1	1727,	0,
#Partially deleted in new
chr12	5371562	5383653	chr12:5371562-5383653	1	+	5371562	5371562	8553170	2	36,612,	0,11479,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	5388588	5406651	chr12:5388588-5406651	3	+	5388588	5388588	8553170	5	33,96,138,104,1034,	0,13725,15573,16764,17029,
#Partially deleted in new
chr12	5432111	5521536	chr12:5432111-5521536	0	+	5432111	5432111	8553170	5	231,153,257,92,142,	0,74453,77464,80005,89283,
#Partially deleted in new
chr12	5432112	5495299	chr12:5432112-5495299	1	+	5432324	5494988	0	2	230,1106,	0,62081,
#Partially deleted in new
chr12	5433124	5494501	chr12:5433124-5494501	0	+	5433124	5433124	8553170	2	208,308,	0,61069,
#Deleted in new
chr12	5494131	5495159	chr12:5494131-5495159	3	+	5494214	5494988	0	1	1028,	0,
#Deleted in new
chr12	5511608	5513076	chr12:5511608-5513076	0	+	5511608	5511608	8553170	3	116,92,272,	0,508,1196,
#Deleted in new
chr12	5511656	5513393	chr12:5511656-5513393	0	+	5511656	5511656	8553170	3	68,92,280,	0,460,1457,
#Partially deleted in new
chr12	5531868	5563337	chr12:5531868-5563337	0	-	5531868	5531868	8553170	3	246,125,92,	0,1962,31377,
#Partially deleted in new
chr12	5562650	5946232	chr12:5562650-5946232	1	-	5563298	5946160	789624	27	918,106,182,53,153,146,101,58,112,196,75,111,12,83,161,135,65,42,56,52,55,152,3,99,327,185,82,	0,2907,13183,15304,15715,36833,50005,50250,52535,72501,85076,169869,170215,176666,181506,188185,236856,243401,244662,265118,267784,269801,274127,291392,358389,359969,383500,
#Partially deleted in new
chr12	5562650	5945259	chr12:5562650-5945259	1	-	5563298	5945217	789624	25	918,106,182,53,153,146,101,58,112,196,75,113,93,161,135,65,42,56,52,55,154,100,327,185,64,	0,2907,13183,15304,15715,36833,50005,50250,52535,72501,85076,169869,176656,181506,188185,236856,243401,244662,265118,267784,269801,291391,358389,359969,382545,
#Partially deleted in new
chr12	5562653	5946232	chr12:5562653-5946232	3	-	5563298	5946160	789624	27	915,106,182,53,153,146,101,58,112,196,75,111,12,83,161,135,65,42,56,52,55,152,3,99,327,185,82,	0,2904,13180,15301,15712,36830,50002,50247,52532,72498,85073,169866,170212,176663,181503,188182,236853,243398,244659,265115,267781,269798,289303,291389,358386,359966,383497,
#Deleted in new
chr12	5562657	5564638	chr12:5562657-5564638	1	-	5563298	5563559	789624	2	911,176,	0,1805,
#Deleted in new
chr12	5583796	5584085	chr12:5583796-5584085	7	+	5583796	5583796	16724991	1	289,	0,
#Partially deleted in new
chr12	5608728	5615295	chr12:5608728-5615295	0	-	5608728	5608728	8553170	4	420,101,58,110,	0,3927,4172,6457,
#Partially deleted in new
chr12	5615183	5739968	chr12:5615183-5739968	0	-	5615183	5739938	789624	6	114,196,75,111,83,61,	0,19968,32543,117336,124133,124724,
#Partially deleted in new
chr12	5635276	5733180	chr12:5635276-5733180	0	-	5635276	5635276	8553170	4	71,75,111,315,	0,12450,97243,97589,
#Partially deleted in new
chr12	5635312	5741123	chr12:5635312-5741123	0	-	5635312	5635312	8553170	6	35,75,111,83,185,235,	0,12414,97207,104004,104957,105576,
#Partially deleted in new
chr12	5732513	5741111	chr12:5732513-5741111	0	-	5732513	5732513	8553170	3	117,83,223,	0,6803,8375,
#Partially deleted in new
chr12	5827804	5870436	chr12:5827804-5870436	0	-	5827804	5827804	8553170	5	16,55,152,99,202,	0,2630,4647,26238,42430,
#Partially deleted in new
chr12	5854047	5881806	chr12:5854047-5881806	0	-	5854047	5854047	8553170	4	94,376,88,28,	0,2210,4563,27731,
#Partially deleted in new
chr12	5948873	6124675	chr12:5948873-6124675	3	-	5949014	6123196	0	52	330,98,40,129,99,117,41,181,111,150,206,105,75,103,200,342,193,221,178,44,165,144,141,117,1379,136,159,157,114,141,147,135,139,104,161,95,241,216,196,101,139,137,47,112,123,217,125,209,103,165,55,255,	0,912,2970,3517,4622,18612,19253,20337,22725,27237,32912,34276,36171,36689,42945,44988,45541,47128,62743,63213,64607,67215,67642,67880,69491,73026,73866,74757,76706,77032,80468,82570,85814,87514,95417,97849,103669,107983,108975,114080,115372,116263,122423,123457,124745,126461,146586,161500,161992,172300,174268,175547,
#Partially deleted in new
chr12	5951872	5953890	chr12:5951872-5953890	0	-	5951872	5951872	8553170	3	11,129,395,	0,518,1623,
#Partially deleted in new
chr12	5952267	5968214	chr12:5952267-5968214	0	-	5952267	5952267	8553170	4	252,99,117,88,	0,1228,15218,15859,
#Partially deleted in new
chr12	5993879	6124770	chr12:5993879-6124770	0	-	5993879	5993879	8553170	6	55,68,103,165,55,29,	0,116635,116986,127294,129262,130862,
#Deleted in new
chr12	6019527	6021926	chr12:6019527-6021926	0	-	6019527	6019527	8553170	3	216,445,27,	0,1596,2372,
#Partially deleted in new
chr12	6095282	6124670	chr12:6095282-6124670	0	-	6122838	6123196	789624	7	302,209,103,165,242,55,250,	0,15091,15583,25891,27442,27859,29138,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	6095698	6095970	chr12:6095698-6095970	3	-	6095698	6095698	8553170	1	272,	0,
#Partially deleted in new
chr12	6121176	6124670	chr12:6121176-6124670	0	-	6122838	6123196	789624	4	162,242,55,250,	0,1548,1965,3244,
#Deleted in new
chr12	6122705	6124674	chr12:6122705-6124674	0	-	6122705	6122705	8553170	2	491,254,	0,1715,
#Deleted in new
chr12	6122723	6124665	chr12:6122723-6124665	0	-	6122723	6122723	8553170	3	279,55,245,	0,418,1697,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	6155034	6160719	chr12:6155034-6160719	3	-	6155034	6155034	8553170	3	322,108,223,	0,2524,5462,
#Partially deleted in new
chr12	6199714	6238271	chr12:6199714-6238271	3	+	6200499	6237828	789624	9	358,144,109,98,75,99,90,84,509,	0,707,25711,32917,33697,35514,35761,36477,38048,
#Partially deleted in new
chr12	6199840	6238247	chr12:6199840-6238247	1	+	6232663	6237828	789624	8	232,109,98,75,99,90,84,485,	0,25585,32791,33571,35388,35635,36351,37922,
#Partially deleted in new
chr12	6199843	6233262	chr12:6199843-6233262	0	+	6199843	6199843	8553170	3	229,109,631,	0,25582,32788,
#Partially deleted in new
chr12	6199874	6238259	chr12:6199874-6238259	1	+	6200499	6237828	789624	9	198,182,109,98,75,99,90,84,497,	0,509,25551,32757,33537,35354,35601,36317,37888,
#Partially deleted in new
chr12	6199881	6238134	chr12:6199881-6238134	0	+	6199881	6199881	8553170	7	191,109,98,75,99,800,372,	0,25544,32750,33530,35347,35594,37881,
#Partially deleted in new
chr12	6200315	6238271	chr12:6200315-6238271	1	+	6200499	6236202	789624	8	250,109,98,75,99,91,84,509,	0,25110,32316,33096,34913,35159,35876,37447,
#Partially deleted in new
chr12	6200384	6238139	chr12:6200384-6238139	1	+	6200499	6237828	789624	9	181,109,98,69,75,99,90,84,377,	0,25041,32247,32552,33027,34844,35091,35807,37378,
#Partially deleted in new
chr12	6200399	6238259	chr12:6200399-6238259	1	+	6200499	6237828	789624	8	166,109,98,75,99,90,84,497,	0,25026,32232,33012,34829,35076,35792,37363,
#Partially deleted in new
chr12	6200399	6232956	chr12:6200399-6232956	0	+	6200399	6200399	8553170	3	166,109,325,	0,25026,32232,
#Partially deleted in new
chr12	6200411	6235251	chr12:6200411-6235251	0	+	6200499	6235251	789624	6	154,126,109,98,75,23,	0,5547,25014,32220,33000,34817,
#Partially deleted in new
chr12	6200435	6225736	chr12:6200435-6225736	0	+	6200435	6200435	8553170	2	130,311,	0,24990,
#Partially deleted in new
chr12	6200758	6236738	chr12:6200758-6236738	1	+	6232663	6236484	789624	8	215,109,98,75,99,90,84,320,	0,24667,31873,32653,34470,34717,35433,35660,
#Partially deleted in new
chr12	6200796	6238225	chr12:6200796-6238225	1	+	6232663	6237828	789624	8	177,109,98,75,99,90,84,463,	0,24629,31835,32615,34432,34679,35395,36966,
#Partially deleted in new
chr12	6224985	6236260	chr12:6224985-6236260	0	+	6224985	6224985	8553170	7	228,109,98,75,99,90,69,	0,440,7646,8426,10243,10490,11206,
#Partially deleted in new
chr12	6226327	6238253	chr12:6226327-6238253	1	+	6232663	6237828	789624	7	33,98,75,99,90,84,491,	0,6304,7084,8901,9148,9864,11435,
#Partially deleted in new
chr12	6232185	6236262	chr12:6232185-6236262	0	+	6232185	6232185	8553170	6	209,98,75,99,90,71,	0,446,1226,3043,3290,4006,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	6234344	6234455	chr12:6234344-6234455	3	-	6234344	6234344	8553170	1	111,	0,
#Partially deleted in new
chr12	6270167	6270425	chr12:6270167-6270425	7	-	6270167	6270167	16724991	1	258,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	6310435	6328505	chr12:6310435-6328505	3	+	6312226	6328145	789624	16	80,206,156,165,96,51,150,111,150,138,120,133,116,146,693,370,	0,1723,3193,4569,5118,5433,5819,6867,7111,7421,7865,8309,8557,15992,16818,17700,
#Partially deleted in new
chr12	6310737	6318973	chr12:6310737-6318973	1	+	6312226	6318957	789624	12	111,206,156,165,96,51,150,111,150,138,120,229,	0,1421,2891,4267,4816,5131,5517,6565,6809,7119,7563,8007,
#Deleted in new
chr12	6310809	6312523	chr12:6310809-6312523	0	+	6310809	6310809	8553170	2	39,365,	0,1349,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	6310932	6328505	chr12:6310932-6328505	1	+	6312226	6328145	789624	16	162,206,156,165,96,51,150,111,150,138,120,133,116,146,693,370,	0,1226,2696,4072,4621,4936,5322,6370,6614,6924,7368,7812,8060,15495,16321,17203,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	6312650	6328485	chr12:6312650-6328485	1	+	6313144	6328145	789624	15	536,156,165,96,51,150,111,150,138,120,133,116,146,693,350,	0,978,2354,2903,3218,3604,4652,4896,5206,5650,6094,6342,13777,14603,15485,
#Deleted in new
chr12	6317566	6318363	chr12:6317566-6318363	0	+	6317566	6317566	8553170	3	130,96,63,	0,332,734,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	6318742	6319206	chr12:6318742-6319206	0	+	6318742	6318742	8553170	2	135,214,	0,250,
#Partially deleted in new
chr12	6318762	6319595	chr12:6318762-6319595	0	+	6318762	6318762	8553170	3	115,116,25,	0,230,808,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	6319459	6328506	chr12:6319459-6328506	1	+	6319559	6328145	789624	4	214,146,693,371,	0,6968,7794,8676,
#Partially deleted in new
chr12	6328756	6342114	chr12:6328756-6342114	3	-	6329311	6341814	0	10	866,289,29,114,74,79,150,129,154,339,	0,1021,1510,1841,2096,4312,4610,4980,5334,13019,
#Partially deleted in new
chr12	6328756	6342114	chr12:6328756-6342114	0	-	6333096	6341814	789624	9	866,289,29,114,74,79,150,129,339,	0,1021,1510,1841,2096,4312,4610,4980,13019,
#Deleted in new
chr12	6329080	6331381	chr12:6329080-6331381	0	-	6329080	6329080	8553170	5	542,289,29,114,529,	0,697,1186,1517,1772,
#Partially deleted in new
chr12	6329144	6342004	chr12:6329144-6342004	0	-	6333425	6341814	789624	9	478,289,29,114,74,79,85,154,229,	0,633,1122,1453,1708,3924,4222,4946,12631,
#Partially deleted in new
chr12	6329236	6342027	chr12:6329236-6342027	1	-	6329311	6341814	789624	9	386,289,29,114,74,79,150,154,252,	0,541,1030,1361,1616,3832,4130,4854,12539,
#Partially deleted in new
chr12	6329464	6333105	chr12:6329464-6333105	0	-	6329464	6329464	8553170	5	158,289,29,114,37,	0,313,802,1133,3604,
#Partially deleted in new
chr12	6329867	6333442	chr12:6329867-6333442	0	-	6329867	6329867	8553170	6	32,29,114,74,79,76,	0,399,730,985,3201,3499,
#Deleted in new
chr12	6330267	6331147	chr12:6330267-6331147	0	-	6330267	6330267	8553170	2	28,550,	0,330,
#Partially deleted in new
chr12	6330441	6341982	chr12:6330441-6341982	0	-	6330441	6341814	789624	7	270,74,79,150,129,154,207,	0,411,2627,2925,3295,3649,11334,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	6331239	6341848	chr12:6331239-6341848	1	-	6331887	6341814	0	6	754,79,150,129,154,73,	0,1829,2127,2497,2851,10536,
#Partially deleted in new
chr12	6333065	6342004	chr12:6333065-6342004	0	-	6333449	6341814	789624	5	82,85,21,154,229,	0,301,779,1025,8710,
#Partially deleted in new
chr12	6333075	6342085	chr12:6333075-6342085	0	-	6333075	6341814	789624	4	441,129,154,310,	0,661,1015,8700,
#Partially deleted in new
chr12	6333457	6342041	chr12:6333457-6342041	0	-	6333457	6341814	789624	4	59,102,154,266,	0,279,633,8318,
#Partially deleted in new
chr12	6333736	6342035	chr12:6333736-6342035	0	-	6333736	6333736	8553170	3	154,154,260,	0,354,8039,
#Partially deleted in new
chr12	6333919	6342004	chr12:6333919-6342004	0	-	6333919	6333919	8553170	2	325,229,	0,7856,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	6344553	6344837	chr12:6344553-6344837	3	+	6344553	6344553	8553170	1	284,	0,
#Partially deleted in new
chr12	6346842	6375224	chr12:6346842-6375224	1	-	6347872	6374960	0	12	1411,76,56,58,79,118,99,164,104,191,268,857,	0,1884,2107,2321,2484,7595,7907,8429,8934,15208,16600,27525,
#Partially deleted in new
chr12	6346846	6375549	chr12:6346846-6375549	3	-	6347872	6374783	0	13	1407,76,56,58,79,118,99,164,104,191,268,470,45,	0,1880,2103,2317,2480,7591,7903,8425,8930,15204,16596,27521,28658,
#Partially deleted in new
chr12	6346846	6364147	chr12:6346846-6364147	1	-	6347872	6355855	789624	11	1407,76,56,58,79,118,99,164,104,174,705,	0,1880,2103,2317,2480,7591,7903,8425,8930,15221,16596,
#Partially deleted in new
chr12	6347508	6374803	chr12:6347508-6374803	0	-	6355826	6374783	789624	11	745,76,56,58,79,118,99,164,104,268,436,	0,1218,1441,1655,1818,6929,7241,7763,8268,15934,26859,
#Partially deleted in new
chr12	6347508	6374803	chr12:6347508-6374803	1	-	6348761	6374783	789624	11	745,76,56,79,118,99,164,104,191,268,436,	0,1218,1441,1818,6929,7241,7763,8268,14542,15934,26859,
#Partially deleted in new
chr12	6347683	6377359	chr12:6347683-6377359	1	-	6347872	6377266	0	13	570,76,56,58,79,118,99,164,104,191,268,470,108,	0,1043,1266,1480,1643,6754,7066,7588,8093,14367,15759,26684,29568,
#Deleted in new
chr12	6348082	6349103	chr12:6348082-6349103	0	-	6348082	6348082	8553170	3	171,76,154,	0,644,867,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	6348949	6354549	chr12:6348949-6354549	0	-	6348949	6348949	8553170	5	56,58,79,195,112,	0,214,377,880,5488,
#Deleted in new
chr12	6354404	6355336	chr12:6354404-6355336	0	-	6354404	6354404	8553170	3	151,99,65,	0,345,867,
#Partially deleted in new
chr12	6354435	6375434	chr12:6354435-6375434	0	-	6354435	6354435	8553170	6	120,99,164,104,202,82,	0,314,836,1341,1757,20917,
#Partially deleted in new
chr12	6354749	6362172	chr12:6354749-6362172	0	-	6354749	6354749	8553170	4	99,107,104,122,	0,522,1027,7301,
#Partially deleted in new
chr12	6355336	6363625	chr12:6355336-6363625	0	-	6355336	6355336	8553170	4	99,104,174,183,	0,440,6731,8106,
#Deleted in new
chr12	6355391	6356293	chr12:6355391-6356293	0	-	6355391	6355391	8553170	2	44,517,	0,385,
#Partially deleted in new
chr12	6363545	6375563	chr12:6363545-6375563	0	-	6363545	6363545	8553170	3	165,361,59,	0,10822,11959,
#Partially deleted in new
chr12	6363632	6375379	chr12:6363632-6375379	0	-	6363632	6363632	8553170	3	78,470,27,	0,10735,11720,
#Deleted in new
chr12	6374365	6375218	chr12:6374365-6375218	0	-	6374365	6374365	8553170	2	363,191,	0,662,
#Deleted in new
chr12	6374368	6377730	chr12:6374368-6377730	0	-	6374368	6377675	789624	2	469,64,	0,3298,
#Deleted in new
chr12	6374447	6375563	chr12:6374447-6375563	0	-	6374447	6374447	8553170	2	390,211,	0,905,
#Deleted in new
chr12	6374465	6375213	chr12:6374465-6375213	0	-	6374465	6374465	8553170	2	372,186,	0,562,
#Deleted in new
chr12	6374489	6377688	chr12:6374489-6377688	0	-	6374489	6374489	8553170	3	348,196,22,	0,2666,3177,
#Deleted in new
chr12	6374625	6377690	chr12:6374625-6377690	0	-	6374625	6374625	8553170	4	212,239,100,24,	0,879,2626,3041,
#Deleted in new
chr12	6374768	6376028	chr12:6374768-6376028	0	-	6374768	6374768	8553170	2	69,524,	0,736,
#Partially deleted in new
chr12	6375044	6385157	chr12:6375044-6385157	0	+	6375044	6375044	8553170	3	550,97,136,	0,9543,9977,
#Partially deleted in new
chr12	6375223	6385277	chr12:6375223-6385277	0	+	6375223	6375223	8553170	5	182,83,97,126,51,	0,288,9364,9798,10003,
#Partially deleted in new
chr12	6375428	6391224	chr12:6375428-6391224	1	+	6375555	6390937	0	10	166,97,126,153,97,98,108,26,229,565,	0,9159,9593,9798,10637,10918,12969,13371,14683,15231,
#Partially deleted in new
chr12	6384032	6391563	chr12:6384032-6391563	3	+	6384358	6390937	0	10	422,97,126,153,97,98,108,26,229,904,	0,555,989,1194,2033,2314,4365,4767,6079,6627,
#Partially deleted in new
chr12	6384169	6386445	chr12:6384169-6386445	0	+	6384358	6386445	789624	6	285,97,111,153,97,99,	0,418,867,1057,1896,2177,
#Partially deleted in new
chr12	6384175	6386443	chr12:6384175-6386443	0	+	6384175	6384175	8553170	5	279,97,358,97,97,	0,412,846,1890,2171,
#Partially deleted in new
chr12	6384252	6388506	chr12:6384252-6388506	1	+	6385228	6386420	789624	6	202,97,126,153,98,109,	0,335,769,974,2094,4145,
#Deleted in new
chr12	6384997	6385455	chr12:6384997-6385455	0	+	6384997	6384997	8553170	2	150,229,	0,229,
#Partially deleted in new
chr12	6385110	6388825	chr12:6385110-6388825	0	+	6385228	6387898	789624	7	37,153,97,98,113,108,26,	0,116,955,1236,2687,3287,3689,
#Partially deleted in new
chr12	6385118	6391111	chr12:6385118-6391111	1	+	6385228	6390937	789624	7	29,153,97,98,26,229,452,	0,108,947,1228,3681,4993,5541,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	6385458	6386371	chr12:6385458-6386371	0	+	6385458	6385458	8553170	2	704,25,	0,888,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	6385839	6387576	chr12:6385839-6387576	0	+	6385839	6385839	8553170	2	323,1230,	0,507,
#Partially deleted in new
chr12	6388253	6390735	chr12:6388253-6390735	0	+	6388253	6388253	8553170	4	252,26,229,76,	0,546,1858,2406,
#Deleted in new
chr12	6388391	6389052	chr12:6388391-6389052	0	+	6388391	6388391	8553170	2	114,253,	0,408,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	6388925	6391571	chr12:6388925-6391571	0	+	6388925	6388925	8553170	2	1415,912,	0,1734,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	6393904	6396148	chr12:6393904-6396148	3	+	6393904	6393904	8553170	3	61,100,1642,	0,324,602,
#Deleted in new
chr12	6409636	6410013	chr12:6409636-6410013	7	-	6409636	6409636	16724991	1	377,	0,
#Deleted in new
chr12	6438497	6438852	chr12:6438497-6438852	7	+	6438497	6438497	16724991	1	355,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	6439000	6451517	chr12:6439000-6451517	0	-	6439000	6439000	5263520	6	676,172,127,114,98,1177,	0,4545,7960,9036,9639,11340,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	6439160	6451567	chr12:6439160-6451567	3	-	6439160	6439160	8553170	7	516,172,127,114,98,640,99,	0,4385,7800,8876,9479,11180,12308,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	6439164	6447773	chr12:6439164-6447773	0	-	6439164	6439164	8553170	3	512,172,813,	0,4381,7796,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	6439238	6451502	chr12:6439238-6451502	1	-	6439238	6439238	8553170	7	438,172,127,114,98,111,34,	0,4307,7722,8798,9401,11631,12230,
#Partially deleted in new
chr12	6444866	6451718	chr12:6444866-6451718	3	+	6445095	6451392	0	6	365,132,180,90,120,451,	0,557,5306,5674,6028,6401,
#Partially deleted in new
chr12	6445351	6451718	chr12:6445351-6451718	0	+	6445351	6445351	8553170	5	204,180,90,120,451,	0,4821,5189,5543,5916,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	6447615	6451515	chr12:6447615-6451515	0	-	6447615	6447615	8553170	3	535,118,47,	0,1024,3853,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	6447772	6451534	chr12:6447772-6451534	0	-	6447772	6447772	8553170	5	378,98,235,88,66,	0,867,2701,3120,3696,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	6447829	6448785	chr12:6447829-6448785	0	-	6447829	6447829	8553170	2	321,146,	0,810,
#Deleted in new
chr12	6450410	6451449	chr12:6450410-6451449	0	-	6450410	6450410	8553170	2	570,87,	0,952,
#Partially deleted in new
chr12	6451689	6462322	chr12:6451689-6462322	0	+	6451689	6451689	8553170	7	95,231,270,339,303,84,289,	0,1377,1757,5716,6955,9165,10344,
#Deleted in new
chr12	6452041	6453673	chr12:6452041-6453673	0	+	6452041	6452041	8553170	3	109,231,227,	0,1025,1405,
#Partially deleted in new
chr12	6452071	6458691	chr12:6452071-6458691	1	+	6452248	6458654	789624	5	241,270,138,76,47,	0,1375,5334,5597,6573,
#Partially deleted in new
chr12	6452083	6462318	chr12:6452083-6462318	3	+	6452248	6462149	0	7	229,231,270,339,303,84,285,	0,983,1363,5322,6561,8771,9950,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	6452230	6466517	chr12:6452230-6466517	0	+	6452230	6452230	8553170	9	389,231,270,138,76,303,84,210,643,	0,836,1216,5175,5438,6414,8624,9803,13644,
#Partially deleted in new
chr12	6452485	6462277	chr12:6452485-6462277	0	+	6452485	6452485	8553170	7	134,231,270,339,303,84,244,	0,581,961,4920,6159,8369,9548,
#Partially deleted in new
chr12	6457705	6462306	chr12:6457705-6462306	0	+	6457705	6457705	8553170	3	39,84,273,	0,3149,4328,
#Deleted in new
chr12	6461034	6462298	chr12:6461034-6462298	0	+	6461034	6461034	8553170	2	356,265,	0,999,
#Partially deleted in new
chr12	6462236	6470987	chr12:6462236-6470987	1	-	6464875	6470531	789624	4	2705,159,127,458,	0,3605,3988,8293,
#Partially deleted in new
chr12	6462236	6470653	chr12:6462236-6470653	1	-	6462831	6470531	789624	5	606,52,159,127,124,	0,2653,3605,3988,8293,
#Partially deleted in new
chr12	6462379	6470614	chr12:6462379-6470614	0	-	6462379	6462379	789624	4	463,52,159,85,	0,2510,3462,8150,
#Partially deleted in new
chr12	6462676	6470645	chr12:6462676-6470645	1	-	6462958	6470531	789624	5	293,52,159,127,116,	0,2213,3165,3548,7853,
#Partially deleted in new
chr12	6463859	6470677	chr12:6463859-6470677	3	-	6464469	6470531	789624	5	627,52,159,127,148,	0,1030,1982,2365,6670,
#Deleted in new
chr12	6464581	6466272	chr12:6464581-6466272	0	-	6464581	6464581	8553170	3	360,159,48,	0,1260,1643,
#Partially deleted in new
chr12	6464670	6470677	chr12:6464670-6470677	0	-	6464670	6464670	8553170	3	271,159,148,	0,1171,5859,
#Partially deleted in new
chr12	6465202	6470677	chr12:6465202-6470677	0	-	6465202	6465202	8553170	4	131,159,127,148,	0,639,1022,5327,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	6466536	6467135	chr12:6466536-6467135	3	+	6466536	6466536	8553170	1	599,	0,
#Deleted in new
chr12	6477713	6480207	chr12:6477713-6480207	7	+	6477713	6477713	16724991	1	2494,	0,
#Partially deleted in new
chr12	6491885	6493598	chr12:6491885-6493598	3	-	6492270	6493136	0	3	582,111,541,	0,976,1172,
#Partially deleted in new
chr12	6492102	6493841	chr12:6492102-6493841	1	-	6492270	6492895	789624	3	365,111,125,	0,759,1614,
#Partially deleted in new
chr12	6492146	6493840	chr12:6492146-6493840	1	-	6492270	6492895	789624	3	321,111,382,	0,715,1312,
#Partially deleted in new
chr12	6492150	6493840	chr12:6492150-6493840	1	-	6492270	6492369	789624	2	317,124,	0,1566,
#Partially deleted in new
chr12	6492151	6493046	chr12:6492151-6493046	1	-	6492270	6492895	789624	2	316,185,	0,710,
#Partially deleted in new
chr12	6492151	6493718	chr12:6492151-6493718	1	-	6492270	6492895	789624	3	316,111,45,	0,710,1522,
#Partially deleted in new
chr12	6492280	6493295	chr12:6492280-6493295	0	-	6492280	6492895	789624	3	187,111,45,	0,581,970,
#Partially deleted in new
chr12	6493355	6511192	chr12:6493355-6511192	0	+	6493355	6493355	8553170	5	192,68,59,182,83,	0,16369,16719,17273,17754,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr12	6493378	6531955	chr12:6493378-6531955	3	+	6495098	6531412	789624	32	776,150,76,59,182,143,128,124,148,198,135,88,181,125,240,175,85,134,133,85,168,173,112,124,156,178,95,81,184,127,156,629,	0,1697,16338,16696,17250,17731,20886,21085,21394,23449,23986,24217,24400,27607,28419,29449,29883,32204,32689,32908,33069,33512,34398,34589,34794,35300,35566,36134,36396,37312,37542,37948,
#Partially deleted in new
chr12	6493386	6510720	chr12:6493386-6510720	0	+	6495098	6510720	789624	6	117,39,150,76,59,92,	0,729,1689,16330,16688,17242,
#Deleted in new
chr12	6493400	6495165	chr12:6493400-6495165	0	+	6493400	6493400	8553170	2	675,90,	0,1675,
#Partially deleted in new
chr12	6494092	6528091	chr12:6494092-6528091	0	+	6495098	6528091	789624	21	62,150,76,128,124,148,198,135,88,181,125,240,175,85,134,133,85,168,173,112,124,	0,983,15624,20172,20371,20680,22735,23272,23503,23686,26893,27705,28735,29169,31490,31975,32194,32355,32798,33684,33875,
#Partially deleted in new
chr12	6494098	6531476	chr12:6494098-6531476	0	+	6495098	6510671	789624	31	56,150,76,182,143,128,124,148,198,135,88,181,125,240,175,85,134,133,85,168,173,112,124,156,178,95,81,184,127,156,150,	0,977,15618,16530,17011,20166,20365,20674,22729,23266,23497,23680,26887,27699,28729,29163,31484,31969,32188,32349,32792,33678,33869,34074,34580,34846,35414,35676,36592,36822,37228,
#Deleted in new
chr12	6510221	6510551	chr12:6510221-6510551	3	+	6510221	6510221	789624	1	330,	0,
#Deleted in new
chr12	6510274	6510522	chr12:6510274-6510522	3	+	6510274	6510274	8553170	1	248,	0,
#Partially deleted in new
chr12	6511224	6516871	chr12:6511224-6516871	0	+	6511224	6511224	8553170	4	28,323,148,44,	0,3040,3548,5603,
#Deleted in new
chr12	6517358	6518203	chr12:6517358-6518203	0	+	6517358	6517358	8553170	3	141,88,425,	0,237,420,
#Partially deleted in new
chr12	6517792	6521933	chr12:6517792-6521933	0	+	6517792	6517792	8553170	3	167,141,136,	0,3177,4005,
#Partially deleted in new
chr12	6521919	6523314	chr12:6521919-6523314	0	+	6521919	6521919	8553170	3	118,119,53,	0,964,1342,
#Partially deleted in new
chr12	6523199	6528067	chr12:6523199-6528067	0	+	6523199	6523199	8553170	8	147,134,133,85,168,173,112,100,	0,2383,2868,3087,3248,3691,4577,4768,
#Deleted in new
chr12	6528546	6529171	chr12:6528546-6529171	0	+	6528546	6528546	8553170	2	310,227,	0,398,
#Partially deleted in new
chr12	6529259	6530730	chr12:6529259-6530730	0	+	6529259	6529259	8553170	3	334,184,40,	0,515,1431,
#Deleted in new
chr12	6532289	6533498	chr12:6532289-6533498	3	-	6532289	6532289	8553170	2	442,35,	0,1174,
#Deleted in new
chr12	6533926	6538371	chr12:6533926-6538371	3	+	6534832	6538170	0	9	643,52,100,107,91,116,82,413,271,	0,883,2567,2757,2993,3174,3382,3657,4174,
#Deleted in new
chr12	6534511	6535141	chr12:6534511-6535141	0	+	6534511	6534511	8553170	2	58,332,	0,298,
#Deleted in new
chr12	6534531	6538340	chr12:6534531-6538340	1	+	6536806	6538170	789624	9	38,52,100,134,91,116,82,413,240,	0,278,1962,2152,2388,2569,2777,3052,3569,
#Deleted in new
chr12	6534532	6537798	chr12:6534532-6537798	0	+	6534532	6534532	8553170	8	37,182,100,107,91,116,82,215,	0,277,1961,2151,2387,2568,2776,3051,
#Deleted in new
chr12	6534533	6538359	chr12:6534533-6538359	1	+	6534832	6538170	0	9	128,52,100,107,91,116,82,413,259,	0,276,1960,2150,2386,2567,2775,3050,3567,
#Deleted in new
chr12	6534540	6538314	chr12:6534540-6538314	0	+	6534540	6534540	8553170	8	29,52,100,327,116,82,413,214,	0,269,1953,2143,2560,2768,3043,3560,
#Deleted in new
chr12	6534753	6538339	chr12:6534753-6538339	1	+	6534832	6538170	0	8	108,100,107,91,116,82,413,239,	0,1740,1930,2166,2347,2555,2830,3347,
#Deleted in new
chr12	6534753	6538317	chr12:6534753-6538317	0	+	6534753	6534753	8553170	7	108,100,327,116,82,413,217,	0,1740,1930,2347,2555,2830,3347,
#Deleted in new
chr12	6534791	6538337	chr12:6534791-6538337	0	+	6534791	6534791	8553170	4	70,100,1313,237,	0,1702,1892,3309,
#Deleted in new
chr12	6535301	6538315	chr12:6535301-6538315	1	+	6536590	6538170	0	8	168,100,107,91,116,82,413,215,	0,1192,1382,1618,1799,2007,2282,2799,
#Deleted in new
chr12	6536604	6538374	chr12:6536604-6538374	1	+	6536604	6538170	0	7	3,107,91,116,82,413,274,	0,79,315,496,704,979,1496,
#Deleted in new
chr12	6537793	6538370	chr12:6537793-6538370	3	-	6537793	6537793	8553170	2	192,230,	0,347,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	6538374	6551900	chr12:6538374-6551900	1	-	6540482	6550703	789624	12	248,1628,131,96,121,158,9,141,96,61,106,306,	0,586,3137,9690,10050,10293,11101,11381,12320,12566,13023,13220,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	6538960	6551900	chr12:6538960-6551900	1	-	6540482	6550703	789624	11	1628,131,93,121,158,9,141,96,61,106,306,	0,2551,9104,9464,9707,10515,10795,11734,11980,12437,12634,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	6538960	6550467	chr12:6538960-6550467	0	-	6538960	6538960	8553170	6	1628,131,93,121,158,712,	0,2551,9104,9464,9707,10795,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	6538960	6549265	chr12:6538960-6549265	0	-	6538960	6538960	8553170	5	1628,131,93,121,598,	0,2551,9104,9464,9707,
#Partially deleted in new
chr12	6539527	6556071	chr12:6539527-6556071	3	-	6540482	6556029	789624	10	1061,131,93,121,158,9,141,96,61,815,	0,1984,8537,8897,9140,9948,10228,11167,11413,15729,
#Partially deleted in new
chr12	6539527	6556071	chr12:6539527-6556071	1	-	6540482	6556029	789624	9	1061,131,93,121,158,141,96,61,815,	0,1984,8537,8897,9140,10228,11167,11413,15729,
#Partially deleted in new
chr12	6539527	6556071	chr12:6539527-6556071	0	-	6551481	6556029	789624	10	1061,131,96,121,158,141,96,61,106,815,	0,1984,8537,8897,9140,10228,11167,11413,11870,15729,
#Partially deleted in new
chr12	6539528	6556083	chr12:6539528-6556083	1	-	6540482	6556029	789624	10	1060,131,96,121,182,9,141,96,61,827,	0,1983,8536,8896,9139,9947,10227,11166,11412,15728,
#Partially deleted in new
chr12	6539538	6556073	chr12:6539538-6556073	1	-	6540482	6556029	789624	10	1050,131,96,121,158,9,141,96,61,817,	0,1973,8526,8886,9129,9937,10217,11156,11402,15718,
#Partially deleted in new
chr12	6539539	6556063	chr12:6539539-6556063	1	-	6540482	6550703	789624	11	1049,131,96,121,158,9,141,96,61,106,807,	0,1972,8525,8885,9128,9936,10216,11155,11401,11858,15717,
#Partially deleted in new
chr12	6539576	6556071	chr12:6539576-6556071	0	-	6539576	6539576	8553170	9	1012,131,481,158,141,96,61,106,815,	0,1935,8488,9091,10179,11118,11364,11821,15680,
#Partially deleted in new
chr12	6539606	6549113	chr12:6539606-6549113	0	-	6539606	6539606	8553170	5	982,131,96,121,446,	0,1905,8458,8818,9061,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	6543503	6544931	chr12:6543503-6544931	3	+	6543503	6543503	8553170	2	359,201,	0,1227,
#Partially deleted in new
chr12	6556862	6567962	chr12:6556862-6567962	1	-	6556992	6567918	789624	15	780,229,123,90,140,141,88,90,200,158,56,236,89,46,147,	0,3235,3584,3835,4068,4801,5021,6218,6452,6751,7028,9238,9666,9914,10953,
#Partially deleted in new
chr12	6556870	6568324	chr12:6556870-6568324	1	-	6556992	6567918	789624	16	772,229,123,90,140,141,88,90,200,158,56,236,89,46,107,118,	0,3227,3576,3827,4060,4793,5013,6210,6444,6743,7020,9230,9658,9906,10945,11336,
#Partially deleted in new
chr12	6556870	6568286	chr12:6556870-6568286	1	-	6556992	6567918	789624	16	772,229,123,90,140,141,88,90,200,158,56,224,89,46,107,148,	0,3227,3576,3827,4060,4793,5013,6210,6444,6743,7020,9230,9658,9906,10945,11268,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	6556870	6568691	chr12:6556870-6568691	3	-	6556992	6567918	789624	16	772,229,123,90,140,141,88,90,200,158,56,224,89,46,107,485,	0,3227,3576,3827,4060,4793,5013,6210,6444,6743,7020,9230,9658,9906,10945,11336,
#Boundary problem: need 55, got 0, diff 55, mapped 0.0
chr12	6556885	6607367	chr12:6556885-6607367	3	-	6578907	6606373	789624	55	757,229,123,90,140,141,88,90,200,158,56,224,89,46,107,164,196,133,109,138,72,118,130,98,166,145,134,89,87,181,176,238,125,118,132,142,174,122,138,201,192,97,132,206,204,240,179,136,128,242,119,195,122,178,68,	0,3212,3561,3812,4045,4778,4998,6195,6429,6728,7005,9215,9643,9891,10930,13983,16188,20899,21143,21523,21960,23696,24158,24405,24763,25251,25729,25962,26141,26312,30498,30826,31412,34580,34808,35030,35507,35810,36205,36530,37573,38448,39120,41008,41336,42887,43331,43648,44040,44403,44762,45074,45490,49388,50414,
#Partially deleted in new
chr12	6556935	6587392	chr12:6556935-6587392	0	-	6566587	6587392	789624	14	707,229,123,90,140,141,88,90,200,158,56,236,89,9,	0,3162,3511,3762,3995,4728,4948,6145,6379,6678,6955,9165,9593,30448,
#Partially deleted in new
chr12	6557220	6568281	chr12:6557220-6568281	0	-	6557220	6557220	8553170	6	422,229,123,46,107,75,	0,2877,3226,3477,10595,10986,
#Partially deleted in new
chr12	6557553	6560793	chr12:6557553-6560793	0	-	6557553	6557553	8553170	3	89,472,96,	0,2544,3144,
#Partially deleted in new
chr12	6560203	6563136	chr12:6560203-6563136	0	-	6560203	6560203	8553170	6	123,341,140,141,88,56,	0,243,727,1460,1680,2877,
#Partially deleted in new
chr12	6560240	6560981	chr12:6560240-6560981	0	-	6560240	6560240	8553170	2	547,51,	0,690,
#Partially deleted in new
chr12	6560935	6563754	chr12:6560935-6563754	0	-	6560935	6560935	8553170	5	135,141,88,90,440,	0,728,948,2145,2379,
#Partially deleted in new
chr12	6561673	6566457	chr12:6561673-6566457	0	-	6561673	6566202	789624	7	131,88,90,200,158,56,357,	0,210,1407,1641,1940,2217,4427,
#Partially deleted in new
chr12	6563439	6568299	chr12:6563439-6568299	0	-	6563439	6567918	789624	8	75,158,56,224,89,46,107,93,	0,174,451,2661,3089,3337,4376,4767,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	6563625	6564305	chr12:6563625-6564305	0	-	6563625	6563625	8553170	2	146,415,	0,265,
#Partially deleted in new
chr12	6563890	6568293	chr12:6563890-6568293	0	-	6563890	6567918	789624	6	56,236,89,46,107,155,	0,2210,2638,2886,3925,4248,
#Partially deleted in new
chr12	6563907	6568275	chr12:6563907-6568275	0	-	6566195	6567918	789624	6	39,236,31,22,107,137,	0,2193,2621,2893,3908,4231,
#Partially deleted in new
chr12	6566097	6568314	chr12:6566097-6568314	0	-	6566097	6567918	789624	5	239,89,46,107,176,	0,431,679,1718,2041,
#Partially deleted in new
chr12	6566259	6568325	chr12:6566259-6568325	1	-	6566520	6567918	789624	4	358,46,107,119,	0,517,1556,1947,
#Partially deleted in new
chr12	6566261	6568297	chr12:6566261-6568297	1	-	6566520	6567918	789624	4	356,46,107,159,	0,515,1554,1877,
#Partially deleted in new
chr12	6566575	6568296	chr12:6566575-6568296	0	-	6566575	6566575	8553170	3	42,46,481,	0,201,1240,
#Deleted in new
chr12	6567499	6568291	chr12:6567499-6568291	0	-	6567499	6567499	8553170	2	423,85,	0,707,
#Partially deleted in new
chr12	6570081	6607356	chr12:6570081-6607356	1	-	6570675	6606373	789624	40	612,164,199,133,109,138,72,136,98,166,145,134,89,87,181,176,238,125,118,132,142,174,122,138,201,192,97,132,206,204,240,140,136,128,242,119,216,122,178,57,	0,787,2989,7703,7947,8327,8764,10956,11209,11567,12055,12533,12766,12945,13116,17302,17630,18216,21384,21612,21834,22311,22614,23009,23334,24377,25252,25924,27812,28140,29691,30135,30452,30844,31207,31566,31878,32294,36192,37218,
#Partially deleted in new
chr12	6570081	6607368	chr12:6570081-6607368	1	-	6570675	6606373	789624	39	612,164,196,133,109,138,72,130,98,166,145,134,89,352,176,238,125,118,132,142,174,122,138,201,192,97,132,206,204,240,179,136,128,242,119,216,113,178,69,	0,787,2992,7703,7947,8327,8764,10962,11209,11567,12055,12533,12766,12945,17302,17630,18216,21384,21612,21834,22311,22614,23009,23334,24377,25252,25924,27812,28140,29691,30135,30452,30844,31207,31566,31878,32294,36192,37218,
#Partially deleted in new
chr12	6570081	6607582	chr12:6570081-6607582	1	-	6570675	6606373	789624	40	612,164,196,133,109,138,72,130,98,166,145,134,89,87,181,176,238,125,118,132,142,174,122,138,201,192,97,132,206,204,240,179,136,128,242,119,195,122,178,283,	0,787,2992,7703,7947,8327,8764,10962,11209,11567,12055,12533,12766,12945,13116,17302,17630,18216,21384,21612,21834,22311,22614,23009,23334,24377,25252,25924,27812,28140,29691,30135,30452,30844,31207,31566,31878,32294,36192,37218,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	6570086	6580726	chr12:6570086-6580726	0	-	6570086	6570086	8553170	8	607,164,196,133,109,138,72,145,	0,782,2987,7698,7942,8322,8759,10495,
#Partially deleted in new
chr12	6570087	6607476	chr12:6570087-6607476	3	-	6570675	6606373	0	40	606,164,196,133,109,138,72,130,98,166,145,134,89,87,181,176,238,125,118,132,142,174,122,138,201,192,97,132,206,204,240,179,136,128,242,119,216,122,178,177,	0,781,2986,7697,7941,8321,8758,10956,11203,11561,12049,12527,12760,12939,13110,17296,17624,18210,21378,21606,21828,22305,22608,23003,23328,24371,25246,25918,27806,28134,29685,30129,30446,30838,31201,31560,31872,32288,36186,37212,
#Partially deleted in new
chr12	6570087	6607582	chr12:6570087-6607582	0	-	6582648	6606373	789624	40	606,164,196,133,109,138,72,130,98,166,145,134,89,87,183,176,238,125,118,132,142,174,122,138,201,192,97,132,206,204,240,140,136,128,242,119,195,122,178,283,	0,781,2986,7697,7941,8321,8758,10956,11203,11561,12049,12527,12760,12939,13108,17296,17624,18210,21378,21606,21828,22305,22608,23003,23328,24371,25246,25918,27806,28134,29685,30129,30446,30838,31201,31560,31872,32288,36186,37212,
#Partially deleted in new
chr12	6570144	6587513	chr12:6570144-6587513	0	-	6578112	6587513	789624	16	549,164,196,133,89,138,72,130,98,166,145,134,89,87,181,130,	0,724,2929,7640,7884,8264,8701,10899,11146,11504,11992,12470,12703,12882,13053,17239,
#Partially deleted in new
chr12	6570157	6573402	chr12:6570157-6573402	0	-	6570157	6570157	8553170	2	875,329,	0,2916,
#Partially deleted in new
chr12	6570170	6573162	chr12:6570170-6573162	0	-	6570637	6573162	789624	2	523,89,	0,2903,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	6570180	6579587	chr12:6570180-6579587	0	-	6570180	6570180	8553170	7	513,164,196,133,109,138,742,	0,688,2893,7604,7848,8228,8665,
#Partially deleted in new
chr12	6570183	6608430	chr12:6570183-6608430	1	-	6570675	6606373	789624	41	510,164,196,133,109,138,72,130,95,166,145,134,89,87,178,176,238,125,118,132,142,174,122,138,201,192,97,132,206,204,240,179,136,128,242,119,195,122,178,118,11,	0,685,2890,7601,7845,8225,8662,10860,11107,11465,11953,12431,12664,12843,13014,17200,17528,18114,21282,21510,21732,22209,22512,22907,23232,24275,25150,25822,27710,28038,29589,30033,30350,30742,31105,31464,31776,32192,36090,37116,38236,
#Partially deleted in new
chr12	6570183	6599971	chr12:6570183-6599971	0	-	6570675	6599971	789624	31	510,164,196,133,109,138,72,130,98,166,145,134,89,87,178,176,238,125,118,132,142,174,122,138,201,192,97,132,206,204,199,	0,685,2890,7601,7845,8225,8662,10860,11107,11465,11953,12431,12664,12843,13014,17200,17528,18114,21282,21510,21732,22209,22512,22907,23232,24275,25150,25822,27710,28038,29589,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	6570185	6584127	chr12:6570185-6584127	0	-	6570185	6570185	8553170	15	508,164,196,133,109,138,72,130,98,166,145,134,89,87,930,	0,683,2888,7599,7843,8223,8660,10858,11105,11463,11951,12429,12662,12841,13012,
#Partially deleted in new
chr12	6570187	6607413	chr12:6570187-6607413	1	-	6570675	6606373	789624	40	506,164,196,133,109,138,72,130,98,166,145,134,89,87,181,176,238,125,118,132,142,174,122,138,201,192,97,132,206,204,240,140,136,128,242,119,195,122,178,114,	0,681,2886,7597,7841,8221,8658,10856,11103,11461,11949,12427,12660,12839,13010,17196,17524,18110,21278,21506,21728,22205,22508,22903,23228,24271,25146,25818,27706,28034,29585,30029,30346,30738,31101,31460,31772,32188,36086,37112,
#Partially deleted in new
chr12	6570190	6606434	chr12:6570190-6606434	1	-	6570675	6606373	789624	38	503,164,196,133,109,138,72,130,98,166,145,134,89,352,176,238,125,118,132,142,174,122,138,201,192,97,132,206,204,240,140,136,128,242,119,195,122,161,	0,678,2883,7594,7838,8218,8655,10853,11100,11458,11946,12424,12657,12836,17193,17521,18107,21275,21503,21725,22202,22505,22900,23225,24268,25143,25815,27703,28031,29582,30026,30343,30735,31098,31457,31769,32185,36083,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	6570190	6581343	chr12:6570190-6581343	0	-	6578907	6581343	789624	10	503,164,196,133,109,138,72,118,130,53,	0,678,2883,7594,7838,8218,8655,10391,10853,11100,
#Partially deleted in new
chr12	6570190	6583331	chr12:6570190-6583331	0	-	6570675	6583331	789624	15	503,164,196,133,109,138,72,136,95,166,145,134,89,87,134,	0,678,2883,7594,7838,8218,8655,10847,11100,11458,11946,12424,12657,12836,13007,
#Partially deleted in new
chr12	6570191	6607334	chr12:6570191-6607334	1	-	6570675	6606373	789624	40	502,164,196,133,109,138,72,130,98,166,145,134,89,87,181,176,238,125,118,132,142,174,122,138,201,192,97,132,206,204,240,140,136,128,242,119,216,122,178,35,	0,677,2882,7593,7837,8217,8654,10852,11099,11457,11945,12423,12656,12835,13006,17192,17520,18106,21274,21502,21724,22201,22504,22899,23224,24267,25142,25814,27702,28030,29581,30025,30342,30734,31097,31456,31768,32184,36082,37108,
#Partially deleted in new
chr12	6570201	6606320	chr12:6570201-6606320	0	-	6570675	6606320	789624	39	492,164,199,133,109,138,72,130,98,166,145,134,89,87,181,176,238,125,118,132,142,174,122,138,201,192,97,132,206,204,240,179,136,128,242,119,195,122,47,	0,667,2869,7583,7827,8207,8644,10842,11089,11447,11935,12413,12646,12825,12996,17182,17510,18096,21264,21492,21714,22191,22494,22889,23214,24257,25132,25804,27692,28020,29571,30015,30332,30724,31087,31446,31758,32174,36072,
#Partially deleted in new
chr12	6570201	6587450	chr12:6570201-6587450	0	-	6570201	6570201	8553170	13	492,164,196,762,72,130,98,166,145,134,89,352,67,	0,667,2872,7583,8644,10842,11089,11447,11935,12413,12646,12825,17182,
#Partially deleted in new
chr12	6570207	6606373	chr12:6570207-6606373	1	-	6570675	6606373	0	38	486,164,196,133,109,138,72,130,98,166,145,134,89,352,176,238,125,118,132,142,174,122,138,201,192,97,132,206,204,240,179,136,128,242,119,216,122,100,	0,661,2866,7577,7821,8201,8638,10836,11083,11441,11929,12407,12640,12819,17176,17504,18090,21258,21486,21708,22185,22488,22883,23208,24251,25126,25798,27686,28014,29565,30009,30326,30718,31081,31440,31752,32168,36066,
#Partially deleted in new
chr12	6570207	6607452	chr12:6570207-6607452	0	-	6582648	6606373	789624	39	486,164,196,133,109,138,72,130,98,166,145,134,89,87,176,238,125,118,132,142,174,122,138,201,192,97,132,206,204,240,179,136,128,242,119,195,122,178,153,	0,661,2866,7577,7821,8201,8638,10836,11083,11441,11929,12407,12640,12819,17176,17504,18090,21258,21486,21708,22185,22488,22883,23208,24251,25126,25798,27686,28014,29565,30009,30326,30718,31081,31440,31752,32168,36066,37092,
#Partially deleted in new
chr12	6570212	6594629	chr12:6570212-6594629	0	-	6570675	6594629	789624	26	481,164,196,133,89,209,72,130,98,166,145,134,89,87,181,176,238,125,118,132,142,174,122,138,201,171,	0,656,2861,7572,7816,8125,8633,10831,11078,11436,11924,12402,12635,12814,12985,17171,17499,18085,21253,21481,21703,22180,22483,22878,23203,24246,
#Partially deleted in new
chr12	6570239	6578906	chr12:6570239-6578906	0	-	6578112	6578906	789624	7	454,164,196,133,107,138,61,	0,629,2834,7545,7789,8169,8606,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	6570241	6579277	chr12:6570241-6579277	0	-	6570241	6570241	8553170	6	791,196,133,109,138,432,	0,2832,7543,7787,8167,8604,
#Partially deleted in new
chr12	6570318	6596030	chr12:6570318-6596030	0	-	6570675	6596030	789624	28	375,164,196,133,109,138,72,130,98,166,145,134,89,87,178,176,289,125,118,132,142,174,122,138,201,192,97,25,	0,550,2755,7466,7710,8090,8527,10725,10972,11330,11818,12296,12529,12708,12879,17065,17342,17979,21147,21375,21597,22074,22377,22772,23097,24140,25015,25687,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	6570344	6571924	chr12:6570344-6571924	0	-	6570344	6570344	8553170	2	349,1056,	0,524,
#Partially deleted in new
chr12	6570351	6600563	chr12:6570351-6600563	0	-	6570675	6600563	789624	33	342,164,196,133,109,138,72,130,95,166,145,134,89,87,181,176,238,125,118,132,142,174,122,138,201,192,97,132,206,204,240,140,30,	0,517,2722,7433,7677,8057,8494,10692,10939,11297,11785,12263,12496,12675,12846,17032,17360,17946,21114,21342,21564,22041,22344,22739,23064,24107,24982,25654,27542,27870,29421,29865,30182,
#Partially deleted in new
chr12	6570371	6583106	chr12:6570371-6583106	0	-	6570662	6583106	789624	14	318,164,196,133,109,138,72,130,98,166,145,134,89,80,	0,497,2702,7413,7657,8037,8474,10672,10919,11277,11765,12243,12476,12655,
#Partially deleted in new
chr12	6570402	6587949	chr12:6570402-6587949	0	-	6578112	6587949	789624	17	291,164,196,133,89,138,72,136,98,166,145,134,89,87,181,176,238,	0,466,2671,7382,7626,8006,8443,10635,10888,11246,11734,12212,12445,12624,12795,16981,17309,
#Partially deleted in new
chr12	6570421	6607397	chr12:6570421-6607397	1	-	6570675	6606373	789624	40	272,164,196,133,109,138,72,136,98,166,145,134,89,87,181,176,238,125,118,132,142,174,122,138,201,192,97,132,206,204,240,179,136,128,242,119,216,122,178,98,	0,447,2652,7363,7607,7987,8424,10616,10869,11227,11715,12193,12426,12605,12776,16962,17290,17876,21044,21272,21494,21971,22274,22669,22994,24037,24912,25584,27472,27800,29351,29795,30112,30504,30867,31226,31538,31954,35852,36878,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	6570508	6580607	chr12:6570508-6580607	0	-	6570508	6570508	8553170	8	185,164,196,133,109,138,72,330,	0,360,2565,7276,7520,7900,8337,9769,
#Partially deleted in new
chr12	6570579	6573101	chr12:6570579-6573101	0	-	6572961	6573101	789624	4	114,164,55,28,	0,289,2350,2494,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	6570955	6579497	chr12:6570955-6579497	0	-	6570955	6570955	8553170	7	77,196,133,109,138,72,39,	0,2118,6829,7073,7453,7890,8503,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	6573118	6580548	chr12:6573118-6580548	0	-	6573118	6573118	8553170	6	151,133,89,138,72,271,	0,4666,4910,5290,5727,7159,
#Deleted in new
chr12	6577719	6578141	chr12:6577719-6578141	0	-	6577719	6577719	8553170	2	198,113,	0,309,
#Deleted in new
chr12	6577874	6578904	chr12:6577874-6578904	0	-	6577874	6577874	8553170	3	43,518,59,	0,154,971,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	6578621	6584739	chr12:6578621-6584739	3	+	6578621	6578621	8553170	2	100,2096,	0,4022,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr12	6578864	6607381	chr12:6578864-6607381	0	-	6590088	6606373	789624	34	53,130,98,166,145,134,89,352,176,238,125,141,118,132,142,174,122,138,201,192,97,132,206,204,240,179,136,128,242,119,195,122,178,82,	0,2179,2426,2784,3272,3750,3983,4162,8519,8847,9433,11208,12601,12829,13051,13528,13831,14226,14551,15594,16469,17141,19029,19357,20908,21352,21669,22061,22424,22783,23095,23511,27409,28435,
#Partially deleted in new
chr12	6578870	6606361	chr12:6578870-6606361	0	-	6578870	6606361	789624	32	47,130,98,166,145,134,89,352,176,238,125,118,132,142,174,122,138,201,192,97,132,206,204,240,179,136,128,242,119,195,122,88,	0,2173,2420,2778,3266,3744,3977,4156,8513,8841,9427,12595,12823,13045,13522,13825,14220,14545,15588,16463,17135,19023,19351,20902,21346,21663,22055,22418,22777,23089,23505,27403,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr12	6580834	6595409	chr12:6580834-6595409	0	-	6580834	6580834	8553170	20	339,98,166,145,134,89,87,183,176,238,125,118,132,142,174,122,138,201,192,76,	0,456,814,1302,1780,2013,2192,2361,6549,6877,7463,10631,10859,11081,11558,11861,12256,12581,13624,14499,
#Deleted in new
chr12	6581473	6581609	chr12:6581473-6581609	3	-	6581473	6581473	789624	1	136,	0,
#Partially deleted in new
chr12	6582878	6588318	chr12:6582878-6588318	0	-	6582878	6582878	8553170	5	58,87,181,566,21,	0,148,319,4505,5419,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	6586829	6587734	chr12:6586829-6587734	0	-	6586829	6586829	8553170	2	730,23,	0,882,
#Partially deleted in new
chr12	6587468	6591698	chr12:6587468-6591698	0	-	6587468	6587468	8553170	5	91,243,125,118,5,	0,238,829,3997,4225,
#Deleted in new
chr12	6591239	6592566	chr12:6591239-6592566	0	-	6591239	6591239	8553170	4	344,132,142,174,	0,454,676,1153,
#Deleted in new
chr12	6591761	6592736	chr12:6591761-6592736	0	-	6591761	6591761	8553170	3	296,174,41,	0,631,934,
#Partially deleted in new
chr12	6600534	6606709	chr12:6600534-6606709	0	-	6600534	6606373	789624	8	135,128,242,119,216,122,178,127,	0,391,754,1113,1425,1841,5739,6048,
#Deleted in new
chr12	6601963	6603142	chr12:6601963-6603142	0	-	6601963	6601963	8553170	3	191,122,214,	0,412,965,
#Partially deleted in new
chr12	6601999	6606682	chr12:6601999-6606682	0	-	6601999	6606373	789624	4	155,122,178,100,	0,376,4274,4583,
#Partially deleted in new
chr12	6602444	6606993	chr12:6602444-6606993	0	-	6602444	6606373	789624	2	53,720,	0,3829,
#Partially deleted in new
chr12	6607299	6614165	chr12:6607299-6614165	0	-	6607299	6607299	8553170	2	118,82,	0,6784,
#Partially deleted in new
chr12	6607299	6614524	chr12:6607299-6614524	0	-	6607299	6607299	8553170	2	118,53,	0,7172,
#Partially deleted in new
chr12	6607299	6614384	chr12:6607299-6614384	0	-	6607299	6607299	8553170	2	118,50,	0,7035,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	6618834	6636447	chr12:6618834-6636447	3	-	6620129	6621248	789624	2	2630,541,	0,17072,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	6618834	6631649	chr12:6618834-6631649	1	-	6620129	6621248	789624	2	2630,65,	0,12750,
#Partially deleted in new
chr12	6620432	6635960	chr12:6620432-6635960	0	-	6620432	6620432	8553170	3	1032,87,54,	0,11152,15474,
#Partially deleted in new
chr12	6638074	6647460	chr12:6638074-6647460	3	-	6638281	6647366	789624	10	330,84,168,180,133,469,118,95,219,137,	0,879,1985,2268,5464,6062,7145,8408,8719,9249,
#Deleted in new
chr12	6638074	6638851	chr12:6638074-6638851	0	-	6638074	6638074	8553170	2	330,177,	0,600,
#Partially deleted in new
chr12	6638159	6647411	chr12:6638159-6647411	1	-	6638281	6647366	789624	10	245,84,168,180,133,370,118,95,219,88,	0,794,1900,2183,5379,5977,7060,8323,8634,9164,
#Partially deleted in new
chr12	6638509	6643668	chr12:6638509-6643668	0	-	6638509	6638509	8553170	5	276,84,168,180,130,	0,444,1550,1833,5029,
#Partially deleted in new
chr12	6644054	6647393	chr12:6644054-6647393	1	-	6644120	6647366	789624	5	551,118,95,219,70,	0,1165,2428,2739,3269,
#Partially deleted in new
chr12	6644239	6647411	chr12:6644239-6647411	0	-	6645296	6647366	789624	4	366,118,219,88,	0,980,2554,3084,
#Partially deleted in new
chr12	6644497	6647283	chr12:6644497-6647283	0	-	6644497	6644497	8553170	4	108,118,95,490,	0,722,1985,2296,
#Partially deleted in new
chr12	6644553	6647433	chr12:6644553-6647433	0	-	6644553	6647366	789624	5	46,118,95,219,110,	0,666,1929,2240,2770,
#Deleted in new
chr12	6646578	6647428	chr12:6646578-6647428	0	-	6646578	6646578	8553170	2	434,105,	0,745,
#Partially deleted in new
chr12	6650279	6663148	chr12:6650279-6663148	3	-	6651194	6663101	0	8	955,62,148,106,115,167,72,84,	0,1044,1991,2382,2656,2950,6447,12785,
#Partially deleted in new
chr12	6650538	6663142	chr12:6650538-6663142	1	-	6653003	6663101	789624	7	696,62,148,109,115,72,78,	0,785,1732,2123,2397,6188,12526,
#Partially deleted in new
chr12	6650590	6663140	chr12:6650590-6663140	1	-	6651194	6663101	0	8	644,62,148,109,115,167,72,76,	0,733,1680,2071,2345,2639,6136,12474,
#Partially deleted in new
chr12	6650625	6663142	chr12:6650625-6663142	1	-	6651194	6663101	0	8	609,62,148,106,106,167,72,78,	0,698,1645,2036,2319,2604,6101,12439,
#Partially deleted in new
chr12	6650790	6656757	chr12:6650790-6656757	0	-	6650790	6650790	8553170	6	444,62,39,106,115,31,	0,533,1480,1871,2145,5936,
#Partially deleted in new
chr12	6650823	6653397	chr12:6650823-6653397	0	-	6650823	6650823	8553170	5	411,62,500,115,168,	0,500,1447,2112,2406,
#Partially deleted in new
chr12	6650964	6656790	chr12:6650964-6656790	0	-	6653003	6656790	789624	6	270,62,39,109,115,64,	0,359,1306,1697,1971,5762,
#Partially deleted in new
chr12	6651011	6663114	chr12:6651011-6663114	0	-	6653003	6663101	789624	7	223,62,148,106,115,72,50,	0,312,1259,1650,1924,5715,12053,
#Partially deleted in new
chr12	6651013	6663114	chr12:6651013-6663114	0	-	6651013	6651013	8553170	6	221,62,148,389,72,50,	0,310,1257,1648,5713,12051,
#Partially deleted in new
chr12	6651095	6663129	chr12:6651095-6663129	0	-	6655878	6663101	789624	9	139,62,148,106,115,167,276,72,65,	0,228,1175,1566,1840,2134,4542,5631,11969,
#Partially deleted in new
chr12	6651194	6663101	chr12:6651194-6663101	1	-	6651194	6663101	0	8	40,62,148,109,106,167,72,37,	0,129,1076,1467,1750,2035,5532,11870,
#Partially deleted in new
chr12	6651194	6663101	chr12:6651194-6663101	1	-	6651345	6663101	0	7	40,62,109,115,167,72,37,	0,129,1467,1741,2035,5532,11870,
#Partially deleted in new
chr12	6651194	6663101	chr12:6651194-6663101	1	-	6651194	6663101	0	7	40,62,148,109,115,167,37,	0,129,1076,1467,1741,2035,11870,
#Partially deleted in new
chr12	6651321	6663119	chr12:6651321-6663119	0	-	6651321	6651321	8553170	7	64,148,106,115,167,72,55,	0,949,1340,1614,1908,5405,11743,
#Partially deleted in new
chr12	6652311	6663129	chr12:6652311-6663129	0	-	6655878	6663101	789624	7	107,109,115,167,276,72,65,	0,350,624,918,3326,4415,10753,
#Partially deleted in new
chr12	6652338	6663085	chr12:6652338-6663085	0	-	6652338	6652402	789624	5	80,109,115,72,21,	0,323,597,4388,10726,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	6656437	6663104	chr12:6656437-6663104	0	-	6656437	6656437	8553170	2	361,40,	0,6627,
#Partially deleted in new
chr12	6663259	6672069	chr12:6663259-6672069	0	+	6663259	6663259	8553170	3	133,584,644,	0,4263,8166,
#Partially deleted in new
chr12	6666476	6689510	chr12:6666476-6689510	1	-	6667713	6679520	789624	10	1639,159,79,225,334,48,238,71,60,413,	0,2554,4283,6739,11650,12186,12469,12978,21690,22621,
#Partially deleted in new
chr12	6666647	6669184	chr12:6666647-6669184	3	+	6666647	6666647	8553170	2	1468,154,	0,2383,
#Partially deleted in new
chr12	6666647	6689510	chr12:6666647-6689510	3	-	6667713	6679520	789624	11	1468,159,79,183,225,334,48,238,71,60,143,	0,2383,4112,5702,6568,11479,12015,12298,12807,21519,22720,
#Partially deleted in new
chr12	6666729	6689292	chr12:6666729-6689292	1	-	6667713	6679520	789624	11	1386,159,79,183,225,334,48,238,71,60,195,	0,2301,4030,5620,6486,11397,11933,12216,12725,21437,22368,
#Partially deleted in new
chr12	6666737	6689454	chr12:6666737-6689454	1	-	6667713	6679520	789624	9	1378,159,79,225,217,238,71,60,87,	0,2293,4022,6478,11389,12208,12717,21429,22630,
#Partially deleted in new
chr12	6667691	6669157	chr12:6667691-6669157	0	-	6667713	6669157	789624	2	373,127,	0,1339,
#Deleted in new
chr12	6672040	6673395	chr12:6672040-6673395	0	-	6672040	6672040	8553170	2	492,180,	0,1175,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	6672403	6689455	chr12:6672403-6689455	0	-	6672403	6679520	789624	9	129,225,93,334,48,238,71,60,88,	0,812,4763,5723,6259,6542,7051,15763,16964,
#Partially deleted in new
chr12	6673059	6678542	chr12:6673059-6678542	0	-	6673059	6673059	8553170	2	381,416,	0,5067,
#Partially deleted in new
chr12	6673247	6689297	chr12:6673247-6689297	0	-	6673247	6679520	789624	6	193,334,238,71,60,200,	0,4879,5698,6207,14919,15850,
#Partially deleted in new
chr12	6678200	6688689	chr12:6678200-6688689	0	-	6678200	6679520	789624	5	260,48,238,71,523,	0,462,745,1254,9966,
#Partially deleted in new
chr12	6678260	6688569	chr12:6678260-6688569	0	-	6678260	6679520	789624	4	200,238,71,403,	0,685,1194,9906,
#Partially deleted in new
chr12	6678431	6688896	chr12:6678431-6688896	0	-	6678431	6679520	789624	6	29,48,238,71,60,60,	0,231,514,1023,9735,10405,
#Partially deleted in new
chr12	6678660	6688859	chr12:6678660-6688859	0	-	6678660	6679520	789624	5	50,238,67,60,157,	0,285,794,9506,10042,
#Partially deleted in new
chr12	6678664	6689299	chr12:6678664-6689299	0	-	6678664	6679520	789624	4	46,238,71,202,	0,281,790,10433,
#Partially deleted in new
chr12	6678809	6689456	chr12:6678809-6689456	0	-	6678809	6678809	8553170	4	374,71,60,89,	0,645,9357,10558,
#Partially deleted in new
chr12	6679219	6689572	chr12:6679219-6689572	0	-	6679219	6679219	8553170	3	306,60,205,	0,8947,10148,
#Partially deleted in new
chr12	6693791	6700800	chr12:6693791-6700800	3	-	6695035	6698061	789624	6	1266,222,82,506,60,187,	0,1638,2651,3495,4253,6822,
#Partially deleted in new
chr12	6693791	6700800	chr12:6693791-6700800	1	-	6695425	6698061	789624	5	1860,82,506,60,187,	0,2651,3495,4253,6822,
#Partially deleted in new
chr12	6693791	6700430	chr12:6693791-6700430	1	-	6695035	6698061	789624	6	1266,222,82,506,60,296,	0,1638,2651,3495,4253,6343,
#Partially deleted in new
chr12	6697294	6699989	chr12:6697294-6699989	0	-	6697294	6698061	789624	3	498,60,56,	0,750,2639,
#Deleted in new
chr12	6697477	6698306	chr12:6697477-6698306	0	-	6697477	6698061	789624	2	315,262,	0,567,
#Deleted in new
chr12	6697579	6698473	chr12:6697579-6698473	0	-	6697579	6698061	789624	3	213,60,17,	0,465,877,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	6709451	6709552	chr12:6709451-6709552	3	+	6709451	6709451	8553170	1	101,	0,
#Deleted in new
chr12	6723232	6723687	chr12:6723232-6723687	3	+	6723232	6723232	8553170	1	455,	0,
#Partially deleted in new
chr12	6723740	6731856	chr12:6723740-6731856	3	+	6724656	6731039	0	8	439,205,76,89,203,106,152,857,	0,873,4185,4482,5506,6661,6928,7259,
#Partially deleted in new
chr12	6724013	6731873	chr12:6724013-6731873	1	+	6724656	6728249	789624	7	139,205,89,203,106,152,874,	0,600,4209,5233,6388,6655,6986,
#Partially deleted in new
chr12	6724038	6731821	chr12:6724038-6731821	0	+	6724656	6728249	789624	7	141,205,89,203,106,152,822,	0,575,4184,5208,6363,6630,6961,
#Partially deleted in new
chr12	6724045	6730821	chr12:6724045-6730821	0	+	6724045	6724045	8553170	5	107,89,203,106,153,	0,4177,5201,6356,6623,
#Partially deleted in new
chr12	6724070	6731807	chr12:6724070-6731807	1	+	6724656	6731039	0	8	82,205,76,89,203,106,152,808,	0,543,3855,4152,5176,6331,6598,6929,
#Partially deleted in new
chr12	6724078	6731828	chr12:6724078-6731828	1	+	6724656	6731039	0	8	172,205,76,89,203,106,152,829,	0,535,3847,4144,5168,6323,6590,6921,
#Partially deleted in new
chr12	6724080	6729432	chr12:6724080-6729432	0	+	6724656	6728249	789624	4	72,205,89,186,	0,533,4142,5166,
#Partially deleted in new
chr12	6724081	6731832	chr12:6724081-6731832	1	+	6724656	6731152	789624	7	98,205,76,89,203,106,833,	0,532,3844,4141,5165,6320,6918,
#Partially deleted in new
chr12	6724089	6729360	chr12:6724089-6729360	0	+	6724656	6728249	789624	4	161,205,89,114,	0,524,4133,5157,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	6724110	6728311	chr12:6724110-6728311	0	+	6724656	6725873	789624	5	69,205,95,76,89,	0,503,1754,3815,4112,
#Partially deleted in new
chr12	6724118	6731824	chr12:6724118-6731824	0	+	6724656	6728249	789624	7	148,205,89,203,106,152,825,	0,495,4104,5128,6283,6550,6881,
#Partially deleted in new
chr12	6724134	6731097	chr12:6724134-6731097	0	+	6724656	6728249	789624	7	45,205,89,203,106,152,98,	0,479,4088,5112,6267,6534,6865,
#Partially deleted in new
chr12	6724183	6729295	chr12:6724183-6729295	0	+	6724656	6729295	789624	5	83,205,76,89,49,	0,430,3742,4039,5063,
#Partially deleted in new
chr12	6724286	6731875	chr12:6724286-6731875	1	+	6724656	6731039	0	7	532,76,89,203,106,152,876,	0,3639,3936,4960,6115,6382,6713,
#Partially deleted in new
chr12	6724290	6730452	chr12:6724290-6730452	0	+	6724656	6728249	789624	4	528,89,203,51,	0,3932,4956,6111,
#Partially deleted in new
chr12	6724292	6729452	chr12:6724292-6729452	0	+	6724656	6727724	789624	6	38,205,130,76,89,206,	0,321,3378,3633,3930,4954,
#Partially deleted in new
chr12	6724293	6730448	chr12:6724293-6730448	0	+	6724656	6730448	789624	5	525,76,89,203,47,	0,3632,3929,4953,6108,
#Partially deleted in new
chr12	6724297	6731842	chr12:6724297-6731842	1	+	6724656	6731039	0	8	33,205,76,89,203,106,152,843,	0,316,3628,3925,4949,6104,6371,6702,
#Partially deleted in new
chr12	6724305	6730509	chr12:6724305-6730509	0	+	6724656	6730509	789624	6	73,205,76,89,203,108,	0,308,3620,3917,4941,6096,
#Partially deleted in new
chr12	6724305	6730804	chr12:6724305-6730804	0	+	6724656	6728249	789624	6	63,205,89,203,106,136,	0,308,3917,4941,6096,6363,
#Partially deleted in new
chr12	6724436	6725910	chr12:6724436-6725910	0	+	6724656	6725668	789624	3	382,110,46,	0,1211,1428,
#Partially deleted in new
chr12	6729034	6730703	chr12:6729034-6730703	0	+	6729034	6729034	8553170	3	415,106,35,	0,1367,1634,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	6742984	6743641	chr12:6742984-6743641	3	+	6742984	6742984	8553170	1	657,	0,
#Partially deleted in new
chr12	6747995	6753555	chr12:6747995-6753555	1	-	6748794	6752334	789624	9	552,213,160,129,54,36,130,78,617,	0,774,1852,2181,2717,3645,3929,4289,4943,
#Partially deleted in new
chr12	6748003	6752916	chr12:6748003-6752916	1	-	6748794	6752334	789624	9	544,213,160,129,54,36,130,78,35,	0,766,1844,2173,2709,3637,3921,4281,4878,
#Partially deleted in new
chr12	6748720	6750318	chr12:6748720-6750318	0	-	6748720	6748720	8553170	3	262,160,142,	0,1127,1456,
#Partially deleted in new
chr12	6748766	6752916	chr12:6748766-6752916	1	-	6748794	6752334	789624	8	216,160,129,54,36,130,78,35,	0,1081,1410,1946,2874,3158,3518,4115,
#Partially deleted in new
chr12	6748794	6767475	chr12:6748794-6767475	3	-	6748794	6752334	789624	8	188,160,129,54,36,130,78,335,	0,1053,1382,1918,2846,3130,3490,18346,
#Partially deleted in new
chr12	6748881	6753069	chr12:6748881-6753069	0	-	6748881	6752334	789624	8	101,160,161,54,36,130,78,131,	0,966,1263,1831,2759,3043,3403,4057,
#Partially deleted in new
chr12	6749786	6753117	chr12:6749786-6753117	0	-	6749786	6749786	8553170	6	221,590,36,130,78,179,	0,390,1854,2138,2498,3152,
#Partially deleted in new
chr12	6750211	6752708	chr12:6750211-6752708	0	-	6750211	6752334	789624	6	94,54,36,130,78,66,	0,501,1429,1713,2073,2431,
#Deleted in new
chr12	6750343	6751156	chr12:6750343-6751156	0	-	6750343	6750343	8553170	2	605,32,	0,781,
#Partially deleted in new
chr12	6750744	6752678	chr12:6750744-6752678	0	-	6750744	6752334	789624	4	22,36,130,394,	0,896,1180,1540,
#Deleted in new
chr12	6751821	6752967	chr12:6751821-6752967	0	-	6751821	6751821	8553170	2	541,29,	0,1117,
#Deleted in new
chr12	6765515	6770875	chr12:6765515-6770875	0	+	6765515	6765515	8553170	5	123,72,79,62,484,	0,4087,4405,4641,4876,
#Deleted in new
chr12	6766374	6770498	chr12:6766374-6770498	1	+	6766705	6770198	789624	5	376,72,156,62,107,	0,3228,3469,3782,4017,
#Deleted in new
chr12	6766374	6770952	chr12:6766374-6770952	3	+	6766705	6770442	789624	5	376,72,79,62,561,	0,3228,3546,3782,4017,
#Deleted in new
chr12	6766375	6769897	chr12:6766375-6769897	0	+	6766705	6769897	789624	3	375,72,54,	0,3227,3468,
#Deleted in new
chr12	6766376	6770943	chr12:6766376-6770943	1	+	6766705	6770442	789624	5	374,72,79,62,552,	0,3226,3544,3780,4015,
#Deleted in new
chr12	6766730	6770802	chr12:6766730-6770802	0	+	6766730	6766730	8553170	5	20,72,79,62,411,	0,2872,3190,3426,3661,
#Deleted in new
chr12	6769052	6770952	chr12:6769052-6770952	0	+	6769052	6769052	8553170	5	125,72,156,62,561,	0,550,791,1104,1339,
#Partially deleted in new
chr12	6772511	6778455	chr12:6772511-6778455	0	+	6772511	6772511	8553170	6	828,305,270,276,243,665,	0,1185,2083,2761,4752,5279,
#Deleted in new
chr12	6772518	6775733	chr12:6772518-6775733	1	+	6772852	6775574	789624	5	392,148,305,270,461,	0,673,1178,2076,2754,
#Partially deleted in new
chr12	6772519	6778453	chr12:6772519-6778453	3	+	6772852	6778390	789624	8	391,148,305,270,276,243,131,210,	0,672,1177,2075,2753,4744,5271,5724,
#Deleted in new
chr12	6777449	6778455	chr12:6777449-6778455	0	+	6777449	6777449	8553170	2	472,212,	0,794,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	6783853	6784161	chr12:6783853-6784161	3	-	6783853	6783853	8553170	1	308,	0,
#Partially deleted in new
chr12	6786857	6800445	chr12:6786857-6800445	0	+	6786857	6786857	8553170	4	148,174,116,139,	0,2631,13214,13449,
#Partially deleted in new
chr12	6789471	6820808	chr12:6789471-6820808	3	+	6800138	6819329	0	10	191,116,165,159,234,348,201,122,68,1510,	0,10600,10835,24670,25287,26584,27658,28949,29375,29827,
#Partially deleted in new
chr12	6789535	6819831	chr12:6789535-6819831	0	+	6789535	6789535	8553170	8	127,159,234,673,201,122,68,533,	0,24606,25223,26195,27594,28885,29311,29763,
#Partially deleted in new
chr12	6789535	6816357	chr12:6789535-6816357	0	+	6789535	6789535	8553170	4	127,322,234,302,	0,24606,25223,26520,
#Partially deleted in new
chr12	6789535	6816281	chr12:6789535-6816281	1	+	6800138	6815735	789624	5	127,116,159,234,551,	0,10536,24606,25223,26195,
#Partially deleted in new
chr12	6789535	6815070	chr12:6789535-6815070	0	+	6789535	6789535	8553170	2	127,929,	0,24606,
#Partially deleted in new
chr12	6789536	6800457	chr12:6789536-6800457	0	+	6789536	6789536	8553170	4	126,195,116,151,	0,9343,10535,10770,
#Deleted in new
chr12	6813551	6816204	chr12:6813551-6816204	0	+	6813551	6813551	8553170	4	51,159,234,149,	0,590,1207,2504,
#Deleted in new
chr12	6814053	6814842	chr12:6814053-6814842	0	+	6814053	6814053	8553170	2	410,84,	0,705,
#Deleted in new
chr12	6821544	6827418	chr12:6821544-6827418	3	+	6823898	6827204	789624	5	356,1298,190,158,766,	0,1923,3939,4651,5108,
#Deleted in new
chr12	6821623	6825172	chr12:6821623-6825172	0	+	6821623	6821623	8553170	2	277,1705,	0,1844,
#Deleted in new
chr12	6821703	6827421	chr12:6821703-6827421	1	+	6823748	6827204	789624	5	197,296,190,158,769,	0,1764,3780,4492,4949,
#Deleted in new
chr12	6821828	6824416	chr12:6821828-6824416	0	+	6821828	6821828	8553170	3	72,296,408,	0,1639,2180,
#Deleted in new
chr12	6821867	6827421	chr12:6821867-6827421	1	+	6825528	6827204	789624	4	33,190,158,769,	0,3616,4328,4785,
#Deleted in new
chr12	6824493	6829972	chr12:6824493-6829972	0	+	6824493	6829972	789624	4	221,190,158,114,	0,990,1702,5365,
#Deleted in new
chr12	6826649	6827421	chr12:6826649-6827421	0	+	6826649	6826649	8553170	2	205,420,	0,352,
#Partially deleted in new
chr12	6828409	6839851	chr12:6828409-6839851	3	+	6828440	6839461	789624	15	529,153,202,132,137,90,53,68,125,102,151,118,76,141,555,	0,1449,1943,2229,2806,3415,5182,5332,5515,8575,9013,9322,9548,10590,10887,
#Deleted in new
chr12	6829307	6831244	chr12:6829307-6831244	0	+	6829307	6829307	8553170	5	63,147,202,132,29,	0,557,1045,1331,1908,
#Partially deleted in new
chr12	6829827	6839846	chr12:6829827-6839846	0	+	6829827	6829827	8553170	14	184,202,132,137,90,53,68,125,102,151,118,76,141,550,	0,525,811,1388,1997,3764,3914,4097,7157,7595,7904,8130,9172,9469,
#Partially deleted in new
chr12	6830483	6837086	chr12:6830483-6837086	0	+	6830483	6830483	8553170	7	71,132,137,90,53,125,102,	0,155,732,1341,3108,3441,6501,
#Partially deleted in new
chr12	6831287	6837685	chr12:6831287-6837685	0	+	6831287	6831287	8553170	6	65,90,53,68,125,701,	0,537,2304,2454,2637,5697,
#Partially deleted in new
chr12	6831822	6838046	chr12:6831822-6838046	0	+	6831822	6831822	8553170	8	92,216,64,125,102,151,118,89,	0,1606,1923,2102,5162,5600,5909,6135,
#Partially deleted in new
chr12	6831842	6837568	chr12:6831842-6837568	0	+	6831842	6831842	8553170	4	72,458,102,146,	0,1749,5142,5580,
#Partially deleted in new
chr12	6833529	6837768	chr12:6833529-6837768	0	+	6833529	6833529	8553170	6	115,68,125,102,151,37,	0,212,395,3455,3893,4202,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	6833614	6834956	chr12:6833614-6834956	0	+	6833614	6833614	8553170	2	435,132,	0,1210,
#Partially deleted in new
chr12	6833661	6837536	chr12:6833661-6837536	0	+	6833661	6833661	8553170	4	148,125,102,114,	0,263,3323,3761,
#Partially deleted in new
chr12	6839953	6847393	chr12:6839953-6847393	0	+	6839953	6839953	8553170	9	1080,367,107,64,163,67,202,217,602,	0,1304,3016,3220,3409,3678,3823,5632,6838,
#Partially deleted in new
chr12	6840210	6847393	chr12:6840210-6847393	3	+	6841287	6846898	789624	11	210,165,87,39,107,64,163,67,202,217,602,	0,658,1047,1375,2759,2963,3152,3421,3566,5375,6581,
#Partially deleted in new
chr12	6840385	6843978	chr12:6840385-6843978	0	+	6841287	6843978	789624	8	35,87,39,107,64,163,64,202,	0,872,1200,2584,2788,2977,3246,3391,
#Partially deleted in new
chr12	6840799	6843977	chr12:6840799-6843977	0	+	6841287	6843977	789624	8	234,87,39,107,64,163,67,201,	0,458,786,2170,2374,2563,2832,2977,
#Partially deleted in new
chr12	6840973	6846898	chr12:6840973-6846898	1	+	6841287	6846898	789624	10	60,87,39,107,64,163,64,202,217,107,	0,284,612,1996,2200,2389,2658,2803,4612,5818,
#Partially deleted in new
chr12	6840994	6843485	chr12:6840994-6843485	0	+	6841287	6841787	789624	7	39,87,39,131,107,64,123,	0,263,591,778,1975,2179,2368,
#Partially deleted in new
chr12	6841040	6843001	chr12:6841040-6843001	0	+	6841040	6841040	8553170	2	584,32,	0,1929,
#Partially deleted in new
chr12	6841285	6845803	chr12:6841285-6845803	0	+	6841287	6845803	789624	8	59,39,107,64,163,67,79,218,	0,300,1684,1888,2077,2346,2614,4300,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	6844792	6851269	chr12:6844792-6851269	1	-	6846787	6850952	789624	5	2111,294,130,177,48,	0,4772,5674,6040,6429,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	6844798	6848872	chr12:6844798-6848872	0	-	6844798	6844798	8553170	2	2105,812,	0,3262,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	6844858	6848367	chr12:6844858-6848367	0	-	6844858	6844858	8553170	3	1509,179,307,	0,1866,3202,
#Deleted in new
chr12	6845366	6847352	chr12:6845366-6847352	0	+	6845366	6845366	8553170	2	436,561,	0,1425,
#Partially deleted in new
chr12	6848808	6852066	chr12:6848808-6852066	3	-	6849042	6850952	789624	6	390,107,294,130,177,845,	0,514,756,1658,2024,2413,
#Partially deleted in new
chr12	6848815	6851252	chr12:6848815-6851252	1	-	6849042	6850952	789624	6	383,107,219,130,177,31,	0,507,749,1651,2017,2406,
#Partially deleted in new
chr12	6848828	6851258	chr12:6848828-6851258	1	-	6849042	6850952	789624	5	370,107,294,130,426,	0,494,736,1638,2004,
#Partially deleted in new
chr12	6848828	6851262	chr12:6848828-6851262	0	-	6848828	6848828	8553170	4	370,536,543,41,	0,494,1638,2393,
#Deleted in new
chr12	6848831	6849807	chr12:6848831-6849807	0	-	6848831	6848831	8553170	2	367,257,	0,719,
#Partially deleted in new
chr12	6848842	6851249	chr12:6848842-6851249	1	-	6849193	6850952	789624	5	356,294,130,177,28,	0,722,1624,1990,2379,
#Partially deleted in new
chr12	6849074	6851292	chr12:6849074-6851292	0	-	6849074	6849074	8553170	4	124,294,130,71,	0,490,1392,2147,
#Partially deleted in new
chr12	6849153	6850490	chr12:6849153-6850490	0	-	6849153	6849153	8553170	4	45,91,294,24,	0,169,411,1313,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	6850198	6851292	chr12:6850198-6851292	0	-	6850198	6850198	8553170	3	398,177,71,	0,634,1023,
#Partially deleted in new
chr12	6852127	6866629	chr12:6852127-6866629	1	+	6852179	6866077	0	20	163,126,67,134,146,185,95,194,72,88,126,154,175,89,192,144,146,154,85,646,	0,3273,3627,3889,4177,4579,5501,6296,7342,8023,8238,8825,9315,10342,11058,11702,11922,12594,13036,13856,
#Partially deleted in new
chr12	6852147	6866620	chr12:6852147-6866620	3	+	6852179	6866077	0	20	143,126,67,134,146,185,95,194,72,88,126,154,175,89,123,144,146,154,85,637,	0,3253,3607,3869,4157,4559,5481,6276,7322,8003,8218,8805,9295,10322,11038,11682,11902,12574,13016,13836,
#Partially deleted in new
chr12	6852152	6861090	chr12:6852152-6861090	0	+	6852179	6861090	789624	5	138,126,67,53,54,	0,3248,3602,3864,8884,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	6856855	6858826	chr12:6856855-6858826	0	+	6856855	6856855	8553170	3	36,95,403,	0,773,1568,
#Partially deleted in new
chr12	6857400	6866632	chr12:6857400-6866632	0	+	6857400	6857400	8553170	14	323,194,72,88,126,154,175,89,123,144,146,154,85,649,	0,1023,2069,2750,2965,3552,4042,5069,5785,6429,6649,7321,7763,8583,
#Partially deleted in new
chr12	6860463	6863916	chr12:6860463-6863916	0	+	6860463	6860463	8553170	6	28,154,175,89,233,87,	0,489,979,2006,2681,3366,
#Partially deleted in new
chr12	6863335	6866104	chr12:6863335-6866104	0	+	6863335	6863335	8553170	5	42,366,154,85,121,	0,494,1386,1828,2648,
#Deleted in new
chr12	6867118	6870948	chr12:6867118-6870948	1	+	6867455	6870383	0	7	563,124,85,133,86,88,684,	0,1745,1980,2139,2569,2930,3146,
#Deleted in new
chr12	6867419	6870946	chr12:6867419-6870946	1	+	6867455	6870383	0	7	262,124,85,133,86,88,682,	0,1444,1679,1838,2268,2629,2845,
#Deleted in new
chr12	6867530	6870828	chr12:6867530-6870828	3	+	6867566	6870383	0	7	151,124,85,133,86,88,564,	0,1333,1568,1727,2157,2518,2734,
#Deleted in new
chr12	6868099	6870383	chr12:6868099-6870383	1	+	6869105	6870383	0	7	156,124,85,133,86,88,119,	0,764,999,1158,1588,1949,2165,
#Deleted in new
chr12	6868113	6870939	chr12:6868113-6870939	1	+	6869105	6870383	0	7	396,124,85,133,86,88,675,	0,750,985,1144,1574,1935,2151,
#Deleted in new
chr12	6868140	6870090	chr12:6868140-6870090	0	+	6869105	6870090	789624	6	369,124,85,133,86,42,	0,723,958,1117,1547,1908,
#Deleted in new
chr12	6868196	6869295	chr12:6868196-6869295	0	+	6869105	6869295	789624	4	127,124,85,38,	0,667,902,1061,
#Deleted in new
chr12	6868468	6869770	chr12:6868468-6869770	0	+	6869105	6869770	789624	4	519,85,133,83,	0,630,789,1219,
#Deleted in new
chr12	6869547	6870137	chr12:6869547-6870137	0	+	6869547	6869547	8553170	2	226,102,	0,488,
#Deleted in new
chr12	6870016	6870571	chr12:6870016-6870571	0	+	6870016	6870016	8553170	2	120,307,	0,248,
#Deleted in new
chr12	6870934	6873285	chr12:6870934-6873285	1	-	6871191	6872901	0	3	385,749,71,	0,1303,2280,
#Deleted in new
chr12	6870934	6873336	chr12:6870934-6873336	3	-	6871191	6872901	0	3	385,760,91,	0,1303,2311,
#Deleted in new
chr12	6871592	6873336	chr12:6871592-6873336	1	-	6872097	6872901	0	2	1405,91,	0,1653,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	6872654	6882287	chr12:6872654-6882287	0	-	6872654	6872901	789624	4	343,136,102,98,	0,985,4844,9535,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	6873388	6884616	chr12:6873388-6884616	7	+	6873388	6873388	16724991	3	393,132,913,	0,8807,10315,
#Partially deleted in new
chr12	6873478	6884438	chr12:6873478-6884438	4	+	6873478	6873478	16724991	3	303,216,68,	0,10225,10892,
#Partially deleted in new
chr12	6873568	6907733	chr12:6873568-6907733	1	+	6905633	6907517	789624	6	213,216,175,110,254,419,	0,10135,32016,32276,32840,33746,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	6873652	6875722	chr12:6873652-6875722	4	+	6873652	6873652	16724991	2	129,220,	0,1850,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	6873655	6884741	chr12:6873655-6884741	5	+	6873655	6873655	16724991	4	126,132,216,371,	0,8540,10048,10715,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	6873681	6906514	chr12:6873681-6906514	0	+	6873681	6873681	8553170	5	100,132,216,175,106,	0,8514,10022,31903,32727,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	6875763	6889358	chr12:6875763-6889358	0	-	6875763	6875763	789624	4	151,102,98,53,	0,1735,6426,13542,
#Partially deleted in new
chr12	6883995	6884613	chr12:6883995-6884613	5	+	6883995	6883995	16724991	1	618,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	6884681	6885786	chr12:6884681-6885786	7	+	6884681	6884681	16724991	1	1105,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	6884897	6885684	chr12:6884897-6885684	5	+	6884897	6884897	16724991	2	480,35,	0,752,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	6899751	6900212	chr12:6899751-6900212	3	+	6899751	6899751	8553170	1	461,	0,
#Partially deleted in new
chr12	6904732	6914229	chr12:6904732-6914229	3	+	6905633	6913003	789624	8	171,175,110,254,131,137,298,339,	0,852,1112,1676,2582,5157,7997,9158,
#Partially deleted in new
chr12	6904732	6914241	chr12:6904732-6914241	1	+	6905633	6914009	789624	5	171,175,110,254,351,	0,852,1112,1676,9158,
#Partially deleted in new
chr12	6904790	6914194	chr12:6904790-6914194	0	+	6905633	6906471	789624	7	113,175,254,131,137,298,304,	0,794,1618,2524,5099,7939,9100,
#Partially deleted in new
chr12	6904833	6914229	chr12:6904833-6914229	0	+	6905633	6906471	789624	5	70,175,254,131,339,	0,751,1575,2481,9057,
#Partially deleted in new
chr12	6904840	6914228	chr12:6904840-6914228	1	+	6905633	6914071	789624	7	63,175,110,254,131,137,338,	0,744,1004,1568,2474,5049,9050,
#Partially deleted in new
chr12	6904862	6906618	chr12:6904862-6906618	0	+	6904862	6904862	8553170	3	213,175,210,	0,722,1546,
#Partially deleted in new
chr12	6904873	6906755	chr12:6904873-6906755	0	+	6904873	6904873	8553170	3	30,175,347,	0,711,1535,
#Partially deleted in new
chr12	6904889	6912811	chr12:6904889-6912811	0	+	6905633	6906471	789624	6	361,175,254,131,137,82,	0,695,1519,2425,5000,7840,
#Partially deleted in new
chr12	6904905	6914243	chr12:6904905-6914243	1	+	6905633	6913003	789624	8	170,175,110,254,131,137,298,353,	0,679,939,1503,2409,4984,7824,8985,
#Partially deleted in new
chr12	6905010	6906455	chr12:6905010-6906455	0	+	6905633	6906455	789624	4	240,175,110,47,	0,574,834,1398,
#Partially deleted in new
chr12	6905027	6913968	chr12:6905027-6913968	1	+	6905633	6913920	789624	6	48,175,110,254,131,78,	0,557,817,1381,2287,8863,
#Partially deleted in new
chr12	6905633	6914071	chr12:6905633-6914071	1	+	6905633	6914009	789624	4	126,110,254,181,	0,211,775,8257,
#Partially deleted in new
chr12	6913101	6914228	chr12:6913101-6914228	0	+	6913101	6913101	8553170	2	136,338,	0,789,
#Partially deleted in new
chr12	6914326	6923696	chr12:6914326-6923696	3	+	6915832	6922800	0	12	333,100,96,59,70,134,223,198,202,109,59,966,	0,1491,2090,2344,2711,3254,3613,5239,7254,7729,8017,8404,
#Partially deleted in new
chr12	6914449	6923696	chr12:6914449-6923696	1	+	6915832	6922800	0	12	210,97,96,59,70,134,223,198,202,109,59,966,	0,1371,1967,2221,2588,3131,3490,5116,7131,7606,7894,8281,
#Deleted in new
chr12	6914537	6916735	chr12:6914537-6916735	0	+	6914537	6914537	8553170	3	122,100,319,	0,1280,1879,
#Deleted in new
chr12	6914556	6916812	chr12:6914556-6916812	0	+	6914556	6914556	8553170	4	103,482,96,142,	0,879,1860,2114,
#Partially deleted in new
chr12	6914588	6923184	chr12:6914588-6923184	1	+	6915832	6922800	0	10	71,100,96,134,223,198,202,109,59,454,	0,1229,1828,2992,3351,4977,6992,7467,7755,8142,
#Deleted in new
chr12	6914593	6917259	chr12:6914593-6917259	0	+	6914593	6914593	8553170	5	66,100,96,59,222,	0,1224,1823,2077,2444,
#Deleted in new
chr12	6914596	6917709	chr12:6914596-6917709	0	+	6914596	6914596	8553170	5	63,100,96,437,129,	0,1221,1820,2074,2984,
#Partially deleted in new
chr12	6914609	6923698	chr12:6914609-6923698	1	+	6915832	6922800	789624	10	50,100,96,59,70,198,202,109,59,968,	0,1208,1807,2061,2428,4956,6971,7446,7734,8121,
#Partially deleted in new
chr12	6915206	6923696	chr12:6915206-6923696	1	+	6915832	6922800	0	11	711,96,59,70,134,223,198,202,109,59,966,	0,1210,1464,1831,2374,2733,4359,6374,6849,7137,7524,
#Deleted in new
chr12	6917328	6918150	chr12:6917328-6918150	0	+	6917328	6917328	8553170	2	386,211,	0,611,
#Partially deleted in new
chr12	6919573	6922810	chr12:6919573-6922810	0	+	6919573	6921528	789624	5	190,286,109,59,80,	0,1923,2482,2770,3157,
#Deleted in new
chr12	6921580	6922885	chr12:6921580-6922885	0	+	6921580	6922401	789624	3	202,59,155,	0,763,1150,
#Deleted in new
chr12	6921988	6922918	chr12:6921988-6922918	0	+	6921988	6921988	8553170	3	104,59,188,	0,355,742,
#Partially deleted in new
chr12	6924462	6942321	chr12:6924462-6942321	3	+	6934001	6941780	789624	10	75,189,138,114,2015,223,697,144,181,575,	0,9377,9713,10002,11084,13382,14018,16417,16911,17284,
#Partially deleted in new
chr12	6928312	6942263	chr12:6928312-6942263	1	+	6934001	6941780	789624	10	72,189,138,114,2015,223,697,144,181,517,	0,5527,5863,6152,7234,9532,10168,12567,13061,13434,
#Deleted in new
chr12	6937697	6938965	chr12:6937697-6938965	0	+	6937697	6937697	8553170	2	370,485,	0,783,
#Partially deleted in new
chr12	6939106	6942057	chr12:6939106-6942057	0	+	6939106	6939106	8553170	3	71,144,684,	0,1773,2267,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	6942977	6945066	chr12:6942977-6945066	0	+	6942977	6942977	8553170	3	267,121,591,	0,564,1498,
#Partially deleted in new
chr12	6943432	6946003	chr12:6943432-6946003	0	+	6943432	6943432	8553170	3	230,177,233,	0,1043,2338,
#Partially deleted in new
chr12	6943501	6945921	chr12:6943501-6945921	2	+	6944121	6945921	789624	4	161,67,177,151,	0,605,974,2269,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	6943507	6944604	chr12:6943507-6944604	3	-	6943507	6943507	8553170	1	1097,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	6943815	6943878	chr12:6943815-6943878	3	+	6943815	6943815	5263520	1	63,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	6943816	6945098	chr12:6943816-6945098	1	+	6944121	6944735	789624	2	357,623,	0,659,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	6943833	6946002	chr12:6943833-6946002	1	+	6944121	6945922	789624	3	340,90,232,	0,642,1937,
#Partially deleted in new
chr12	6944022	6946002	chr12:6944022-6946002	1	+	6944121	6945922	789624	3	151,177,232,	0,453,1748,
#Partially deleted in new
chr12	6944121	6945996	chr12:6944121-6945996	1	+	6944528	6945922	789624	3	52,273,226,	0,258,1649,
#Partially deleted in new
chr12	6946467	6952180	chr12:6946467-6952180	0	+	6946725	6952180	789624	4	272,57,123,198,	0,4996,5141,5515,
#Partially deleted in new
chr12	6946573	6955262	chr12:6946573-6955262	0	+	6946725	6952152	789624	5	166,123,65,190,112,	0,5035,5539,8231,8577,
#Partially deleted in new
chr12	6946576	6961316	chr12:6946576-6961316	3	+	6946725	6960920	0	16	163,123,195,190,117,114,97,80,150,132,155,68,152,92,140,191,	0,5032,5406,8228,8574,8795,9083,9565,9842,11077,11342,13350,13511,13767,14229,14549,
#Partially deleted in new
chr12	6946576	6954939	chr12:6946576-6954939	0	+	6946576	6946576	8553170	3	163,266,135,	0,5335,8228,
#Partially deleted in new
chr12	6946609	6955173	chr12:6946609-6955173	0	+	6946609	6946609	8553170	4	130,195,190,23,	0,5373,8195,8541,
#Partially deleted in new
chr12	6946709	6955267	chr12:6946709-6955267	0	+	6946709	6946709	8553170	5	30,227,195,190,117,	0,4795,5273,8095,8441,
#Partially deleted in new
chr12	6951261	6954973	chr12:6951261-6954973	0	+	6951512	6954973	789624	5	30,62,123,195,169,	0,197,347,721,3543,
#Partially deleted in new
chr12	6951268	6961313	chr12:6951268-6961313	1	+	6951512	6960920	0	16	252,123,195,190,117,114,97,80,150,132,155,68,152,92,140,188,	0,340,714,3536,3882,4103,4391,4873,5150,6385,6650,8658,8819,9075,9537,9857,
#Partially deleted in new
chr12	6951270	6961316	chr12:6951270-6961316	1	+	6951512	6960864	0	16	250,123,195,190,117,114,97,80,150,132,155,68,152,92,283,191,	0,338,712,3534,3880,4101,4389,4871,5148,6383,6648,8656,8817,9073,9392,9855,
#Partially deleted in new
chr12	6951284	6953415	chr12:6951284-6953415	0	+	6951284	6951284	8553170	2	236,1807,	0,324,
#Partially deleted in new
chr12	6951355	6961316	chr12:6951355-6961316	0	+	6951355	6951355	8553170	15	165,569,190,117,114,97,80,150,132,155,68,152,92,140,191,	0,253,3449,3795,4016,4304,4786,5063,6298,6563,8571,8732,8988,9450,9770,
#Partially deleted in new
chr12	6951355	6954847	chr12:6951355-6954847	0	+	6951355	6951355	8553170	4	160,123,266,43,	0,253,556,3449,
#Partially deleted in new
chr12	6951371	6955485	chr12:6951371-6955485	0	+	6951512	6951999	789624	6	149,123,266,190,117,114,	0,237,540,3433,3779,4000,
#Partially deleted in new
chr12	6951372	6954915	chr12:6951372-6954915	0	+	6951512	6952068	789624	4	148,123,161,111,	0,236,644,3432,
#Partially deleted in new
chr12	6951372	6952224	chr12:6951372-6952224	0	+	6951372	6951372	8553170	3	148,123,242,	0,236,610,
#Partially deleted in new
chr12	6951372	6955186	chr12:6951372-6955186	0	+	6951512	6955186	789624	6	148,123,195,49,41,36,	0,236,610,3432,3581,3778,
#Partially deleted in new
chr12	6951374	6955189	chr12:6951374-6955189	0	+	6951512	6955189	789624	4	146,195,190,39,	0,608,3430,3776,
#Partially deleted in new
chr12	6951434	6953601	chr12:6951434-6953601	0	+	6951434	6951434	8553170	4	86,123,195,260,	0,174,548,1907,
#Partially deleted in new
chr12	6951436	6955394	chr12:6951436-6955394	0	+	6951512	6952152	789624	6	84,123,65,190,117,23,	0,172,676,3368,3714,3935,
#Partially deleted in new
chr12	6951440	6955485	chr12:6951440-6955485	0	+	6951440	6951440	8553170	5	291,195,190,117,114,	0,542,3364,3710,3931,
#Deleted in new
chr12	6959321	6961316	chr12:6959321-6961316	0	+	6959321	6959321	8553170	6	62,68,152,92,140,191,	0,605,766,1022,1484,1804,
#Deleted in new
chr12	6959412	6960404	chr12:6959412-6960404	0	+	6959412	6959412	8553170	3	582,152,61,	0,675,931,
#Deleted in new
chr12	6959575	6961316	chr12:6959575-6961316	0	+	6959575	6959575	8553170	6	30,68,152,92,140,191,	0,351,512,768,1230,1550,
#Deleted in new
chr12	6963245	6964447	chr12:6963245-6964447	3	+	6963245	6963245	789624	2	103,247,	0,955,
#Deleted in new
chr12	6963698	6963766	chr12:6963698-6963766	3	+	6963698	6963698	5263520	1	68,	0,
#Deleted in new
chr12	6964096	6964191	chr12:6964096-6964191	3	+	6964096	6964096	5263520	1	95,	0,
#Deleted in new
chr12	6964948	6965382	chr12:6964948-6965382	3	+	6964948	6964948	8553170	1	434,	0,
#Partially deleted in new
chr12	6965326	6967575	chr12:6965326-6967575	0	-	6965326	6965326	8553170	4	386,6,77,405,	0,584,1097,1844,
#Partially deleted in new
chr12	6965351	6970825	chr12:6965351-6970825	3	-	6965684	6970543	789624	10	361,6,77,78,104,130,185,80,85,409,	0,559,1072,1819,2324,2540,3059,4146,4844,5065,
#Partially deleted in new
chr12	6965351	6970716	chr12:6965351-6970716	0	-	6965351	6965351	8553170	9	361,6,77,78,346,185,80,85,300,	0,559,1072,1819,2324,3059,4146,4844,5065,
#Partially deleted in new
chr12	6965351	6970751	chr12:6965351-6970751	1	-	6966448	6970543	789624	4	361,77,85,335,	0,1072,4844,5065,
#Partially deleted in new
chr12	6965353	6970623	chr12:6965353-6970623	1	-	6965684	6970543	789624	9	361,78,78,104,130,185,80,85,207,	0,1069,1817,2322,2538,3057,4144,4842,5063,
#Partially deleted in new
chr12	6965463	6970649	chr12:6965463-6970649	1	-	6965691	6970543	789624	8	243,78,104,130,185,80,85,233,	0,1707,2212,2428,2947,4034,4732,4953,
#Partially deleted in new
chr12	6965684	6970753	chr12:6965684-6970753	1	-	6965684	6970543	789624	9	28,6,77,68,130,185,80,85,337,	0,226,739,1486,2207,2726,3813,4511,4732,
#Partially deleted in new
chr12	6966423	6967962	chr12:6966423-6967962	0	-	6966423	6967962	789624	3	77,165,67,	0,747,1472,
#Deleted in new
chr12	6967336	6967606	chr12:6967336-6967606	3	-	6967336	6967336	789624	1	270,	0,
#Partially deleted in new
chr12	6967710	6970667	chr12:6967710-6970667	0	-	6967710	6970543	789624	7	69,130,185,80,108,85,251,	0,181,700,1787,2245,2485,2706,
#Partially deleted in new
chr12	6967746	6970680	chr12:6967746-6970680	0	-	6968531	6970543	789624	5	275,177,71,85,264,	0,664,1760,2449,2670,
#Partially deleted in new
chr12	6967891	6970642	chr12:6967891-6970642	0	-	6967891	6970543	789624	4	130,298,85,226,	0,519,2304,2525,
#Partially deleted in new
chr12	6968450	6970645	chr12:6968450-6970645	0	-	6968450	6968450	8553170	5	145,80,113,85,229,	0,1047,1505,1745,1966,
#Partially deleted in new
chr12	6968497	6970645	chr12:6968497-6970645	0	-	6968497	6968497	8553170	3	98,80,450,	0,1000,1698,
#Deleted in new
chr12	6969927	6970702	chr12:6969927-6970702	0	-	6969927	6969927	8553170	2	353,286,	0,489,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	6970892	6979941	chr12:6970892-6979941	3	+	6970923	6975809	0	6	199,102,142,59,150,4246,	0,3446,3659,4197,4336,4803,
#Partially deleted in new
chr12	6970912	6975573	chr12:6970912-6975573	0	+	6970912	6970912	8553170	4	179,102,597,345,	0,3426,3639,4316,
#Partially deleted in new
chr12	6970920	6997428	chr12:6970920-6997428	0	+	6970920	6987829	789624	8	171,102,142,59,150,57,202,204,	0,3418,3631,4169,4308,16861,17247,26304,
#Partially deleted in new
chr12	6970934	6974901	chr12:6970934-6974901	0	+	6970934	6970934	8553170	2	157,563,	0,3404,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	6970941	6988260	chr12:6970941-6988260	0	+	6970941	6983052	789624	8	150,102,142,59,150,205,57,93,	0,3397,3610,4148,4287,12060,16840,17226,
#Partially deleted in new
chr12	6971060	6975977	chr12:6971060-6975977	0	+	6971060	6975809	789624	5	31,102,142,59,282,	0,3278,3491,4029,4635,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	6976185	7018510	chr12:6976185-7018510	3	-	6977145	7018424	789624	13	706,129,159,148,167,87,109,179,38,94,107,108,237,	0,948,1181,1412,2155,2417,3285,4818,5409,5625,6490,7246,42088,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	6976185	7018477	chr12:6976185-7018477	0	-	6978336	7018424	789624	11	706,129,1141,87,109,179,38,94,107,108,204,	0,948,1181,2417,3285,4818,5409,5625,6490,7246,42088,
#Partially deleted in new
chr12	6976805	6981148	chr12:6976805-6981148	0	-	6976805	6976805	8553170	7	86,129,159,87,87,109,145,	0,328,561,1615,1797,2665,4198,
#Partially deleted in new
chr12	6977646	7018474	chr12:6977646-7018474	0	-	6981619	7018424	789624	8	99,167,87,109,179,38,94,201,	0,694,956,1824,3357,3948,4164,40627,
#Partially deleted in new
chr12	6977698	7018474	chr12:6977698-7018474	0	-	6981165	7018424	789624	9	47,167,87,109,179,94,107,108,201,	0,642,904,1772,3305,4112,4977,5733,40575,
#Partially deleted in new
chr12	6977839	7018474	chr12:6977839-7018474	0	-	6979480	7018424	789624	8	668,87,109,38,94,107,108,201,	0,763,1631,3755,3971,4836,5592,40434,
#Deleted in new
chr12	6978040	6979270	chr12:6978040-6979270	0	-	6978040	6978040	8553170	2	467,668,	0,562,
#Partially deleted in new
chr12	6979594	6981157	chr12:6979594-6981157	0	-	6979594	6979594	8553170	2	373,154,	0,1409,
#Deleted in new
chr12	6980706	6981858	chr12:6980706-6981858	0	-	6980706	6980706	8553170	3	476,38,48,	0,888,1104,
#Partially deleted in new
chr12	6981293	6982783	chr12:6981293-6982783	0	-	6981293	6981293	8553170	3	339,94,108,	0,517,1382,
#Partially deleted in new
chr12	6981541	7018474	chr12:6981541-7018474	0	-	6981541	6981541	8553170	2	363,201,	0,36732,
#Partially deleted in new
chr12	6981559	6983465	chr12:6981559-6983465	0	-	6981559	6981559	8553170	3	345,107,34,	0,1116,1872,
#Partially deleted in new
chr12	6981808	7018474	chr12:6981808-7018474	0	-	7001442	7018424	789624	5	96,107,108,59,201,	0,867,1623,19619,36465,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	6988258	7071032	chr12:6988258-7071032	3	+	7061912	7070651	0	15	111,118,168,157,79,208,178,126,200,154,116,79,129,75,1178,	0,8966,54702,67782,73580,74216,74631,76008,76841,77558,78259,78780,79384,80197,81596,
#Partially deleted in new
chr12	7032107	7032398	chr12:7032107-7032398	7	+	7032107	7032107	16724991	1	291,	0,
#Deleted in new
chr12	7041155	7041641	chr12:7041155-7041641	7	-	7041155	7041155	16724991	1	486,	0,
#Partially deleted in new
chr12	7060514	7071032	chr12:7060514-7071032	1	+	7061912	7070651	0	12	363,166,208,178,126,200,154,116,79,129,75,1178,	0,1237,1960,2375,3752,4585,5302,6003,6524,7128,7941,9340,
#Partially deleted in new
chr12	7060675	7070943	chr12:7060675-7070943	1	+	7061912	7070651	0	12	202,79,208,178,126,200,154,116,79,129,75,1089,	0,1163,1799,2214,3591,4424,5141,5842,6363,6967,7780,9179,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	7060675	7071029	chr12:7060675-7071029	1	+	7062523	7070651	789624	16	202,166,208,178,11,37,99,125,76,150,116,79,129,17,76,1175,	0,1076,1799,2214,2726,3393,3618,4424,4705,5145,5842,6363,6967,7113,7779,9179,
#Partially deleted in new
chr12	7060684	7070960	chr12:7060684-7070960	1	+	7064376	7070651	789624	11	193,166,178,126,200,154,116,79,129,75,1106,	0,1067,2205,3582,4415,5132,5833,6354,6958,7771,9170,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	7060716	7062228	chr12:7060716-7062228	0	+	7060716	7060716	8553170	2	161,390,	0,1122,
#Partially deleted in new
chr12	7060722	7065178	chr12:7060722-7065178	0	+	7060722	7060722	8553170	5	155,40,178,126,79,	0,1029,2167,3544,4377,
#Partially deleted in new
chr12	7060724	7062808	chr12:7060724-7062808	0	+	7060724	7060724	8553170	3	153,79,334,	0,1114,1750,
#Partially deleted in new
chr12	7060743	7062808	chr12:7060743-7062808	0	+	7060743	7060743	8553170	3	134,166,334,	0,1008,1731,
#Partially deleted in new
chr12	7061211	7062985	chr12:7061211-7062985	0	+	7061912	7062985	789624	4	197,166,208,96,	0,540,1263,1678,
#Partially deleted in new
chr12	7061211	7062978	chr12:7061211-7062978	0	+	7061912	7062978	789624	4	197,79,208,89,	0,627,1263,1678,
#Partially deleted in new
chr12	7061383	7064380	chr12:7061383-7064380	0	+	7061912	7064380	789624	4	534,208,178,114,	0,1091,1506,2883,
#Partially deleted in new
chr12	7061838	7071030	chr12:7061838-7071030	0	+	7061838	7067014	789624	11	79,208,178,126,200,154,116,109,129,75,1176,	0,636,1051,2428,3261,3978,4679,5170,5804,6617,8016,
#Partially deleted in new
chr12	7062582	7066618	chr12:7062582-7066618	0	+	7064376	7066618	789624	5	80,126,200,154,101,	0,1684,2517,3234,3935,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	7063908	7065898	chr12:7063908-7065898	0	+	7063908	7063908	8553170	3	484,200,82,	0,1191,1908,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	7064177	7065412	chr12:7064177-7065412	0	+	7064177	7064177	8553170	2	215,313,	0,922,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	7065239	7066313	chr12:7065239-7066313	0	+	7065239	7065239	8553170	2	60,497,	0,577,
#Deleted in new
chr12	7066191	7067662	chr12:7066191-7067662	0	+	7066191	7066191	8553170	3	442,79,20,	0,847,1451,
#Deleted in new
chr12	7066630	7070113	chr12:7066630-7070113	0	+	7066630	7066630	8553170	4	487,129,75,259,	0,1012,1825,3224,
#Deleted in new
chr12	7067090	7070240	chr12:7067090-7070240	0	+	7067090	7067090	8553170	5	27,129,75,215,386,	0,552,1365,1528,2764,
#Deleted in new
chr12	7067394	7068530	chr12:7067394-7068530	0	+	7067394	7067394	8553170	2	377,75,	0,1061,
#Partially deleted in new
chr12	7080198	7092445	chr12:7080198-7092445	1	-	7080531	7092388	789624	11	1103,75,156,79,122,148,197,147,193,229,59,	0,1833,5662,6180,8411,8640,9094,9388,9857,11253,12188,
#Partially deleted in new
chr12	7080208	7092607	chr12:7080208-7092607	3	-	7080531	7092388	789624	11	1093,75,156,79,122,148,197,147,193,229,221,	0,1823,5652,6170,8401,8630,9084,9378,9847,11243,12178,
#Partially deleted in new
chr12	7080213	7092441	chr12:7080213-7092441	0	-	7080213	7080213	8553170	9	1088,75,156,79,122,651,147,193,990,	0,1818,5647,6165,8396,8625,9373,9842,11238,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	7080418	7087844	chr12:7080418-7087844	0	-	7080418	7080418	8553170	4	883,75,156,1466,	0,1613,5442,5960,
#Partially deleted in new
chr12	7080420	7092472	chr12:7080420-7092472	1	-	7080531	7092388	789624	11	881,75,156,79,122,148,197,147,91,229,86,	0,1611,5440,5958,8189,8418,8872,9166,9635,11031,11966,
#Partially deleted in new
chr12	7080420	7091892	chr12:7080420-7091892	1	-	7080531	7091816	789624	11	881,75,156,79,122,148,197,147,193,229,120,	0,1611,5440,5958,8189,8418,8872,9166,9635,11031,11352,
#Partially deleted in new
chr12	7080480	7088848	chr12:7080480-7088848	0	-	7080531	7088848	8553170	5	821,75,79,122,10,	0,1551,5898,8129,8358,
#Partially deleted in new
chr12	7080740	7090792	chr12:7080740-7090792	0	-	7080740	7080740	8553170	10	561,75,156,79,122,148,197,147,193,203,	0,1291,5120,5638,7869,8098,8552,8846,9315,9849,
#Deleted in new
chr12	7089357	7092430	chr12:7089357-7092430	0	-	7089809	7092388	789624	5	132,234,193,229,44,	0,229,698,2094,3029,
#Deleted in new
chr12	7089464	7092540	chr12:7089464-7092540	0	-	7089464	7090164	789624	4	25,147,193,154,	0,122,591,2922,
#Partially deleted in new
chr12	7089586	7099960	chr12:7089586-7099960	0	-	7093805	7099960	789624	7	147,193,229,103,231,75,60,	0,469,1865,2800,4053,10099,10314,
#Deleted in new
chr12	7089614	7092441	chr12:7089614-7092441	0	-	7089614	7092388	789624	4	119,118,229,55,	0,441,1837,2772,
#Deleted in new
chr12	7089627	7092493	chr12:7089627-7092493	0	-	7089627	7090164	789624	4	106,193,185,107,	0,428,1824,2759,
#Deleted in new
chr12	7089647	7090358	chr12:7089647-7090358	0	-	7089647	7089647	8553170	2	173,303,	0,408,
#Deleted in new
chr12	7089654	7092493	chr12:7089654-7092493	0	-	7089654	7092388	789624	4	46,193,229,107,	0,401,1797,2732,
#Deleted in new
chr12	7089695	7091891	chr12:7089695-7091891	0	-	7089695	7090164	789624	4	38,193,229,93,	0,360,1756,2103,
#Deleted in new
chr12	7089935	7092441	chr12:7089935-7092441	0	-	7089935	7089935	8553170	3	313,229,55,	0,1516,2451,
#Deleted in new
chr12	7091155	7092493	chr12:7091155-7092493	0	-	7091155	7091155	8553170	2	525,107,	0,1231,
#Partially deleted in new
chr12	7093706	7109197	chr12:7093706-7109197	1	-	7093805	7109180	789624	4	164,113,84,88,	0,6194,8297,15403,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	7094553	7109273	chr12:7094553-7109273	3	-	7096390	7109180	789624	6	2610,75,126,190,229,164,	0,5132,5347,7344,13697,14556,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	7094753	7097258	chr12:7094753-7097258	0	-	7094753	7094753	8553170	2	472,32,	0,2473,
#Partially deleted in new
chr12	7096390	7109238	chr12:7096390-7109238	1	-	7096956	7109180	789624	6	773,122,126,190,229,129,	0,3295,3510,5507,11860,12719,
#Partially deleted in new
chr12	7096769	7102085	chr12:7096769-7102085	0	-	7096769	7102085	789624	2	394,188,	0,5128,
#Partially deleted in new
chr12	7097153	7109197	chr12:7097153-7109197	0	-	7097153	7109180	789624	5	10,75,190,229,88,	0,2532,4744,11097,11956,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	7098295	7108303	chr12:7098295-7108303	0	-	7100013	7108303	789624	5	117,75,126,190,53,	0,1390,1605,3602,9955,
#Partially deleted in new
chr12	7098296	7108299	chr12:7098296-7108299	0	-	7100013	7108299	789624	5	92,75,126,190,49,	0,1389,1604,3601,9954,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	7101604	7109210	chr12:7101604-7109210	1	-	7101823	7109180	789624	3	483,229,101,	0,6646,7505,
#Partially deleted in new
chr12	7101899	7108601	chr12:7101899-7108601	0	-	7101899	7101899	8553170	2	188,351,	0,6351,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	7108051	7111606	chr12:7108051-7111606	0	+	7108051	7108051	8553170	3	61,275,236,	0,2246,3319,
#Deleted in new
chr12	7108144	7109128	chr12:7108144-7109128	0	-	7108144	7108144	8553170	2	335,19,	0,965,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	7108307	7121851	chr12:7108307-7121851	3	+	7108307	7108307	5263520	12	174,275,84,275,582,58,90,3292,128,54,120,140,	0,365,1756,1990,2717,3699,6822,7078,10591,11192,12198,13404,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	7108570	7121027	chr12:7108570-7121027	1	+	7108570	7108570	8553170	8	377,275,582,58,90,128,54,522,	0,1727,2454,3436,6559,10328,10929,11935,
#Deleted in new
chr12	7108570	7110470	chr12:7108570-7110470	0	+	7108570	7108570	8553170	2	377,173,	0,1727,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	7115735	7116486	chr12:7115735-7116486	3	-	7115735	7115735	8553170	1	751,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	7118784	7118891	chr12:7118784-7118891	3	+	7118784	7118784	8553170	1	107,	0,
#Partially deleted in new
chr12	7120557	7122501	chr12:7120557-7122501	0	+	7120557	7120557	8553170	2	68,257,	0,1687,
#Partially deleted in new
chr12	7123683	7128942	chr12:7123683-7128942	3	-	7124120	7128775	0	4	491,102,179,240,	0,945,4556,5019,
#Partially deleted in new
chr12	7124066	7128561	chr12:7124066-7128561	0	-	7124066	7124066	8553170	3	108,102,322,	0,562,4173,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	7127498	7128873	chr12:7127498-7128873	1	-	7127670	7128775	789624	3	214,179,171,	0,741,1204,
#Deleted in new
chr12	7127549	7128862	chr12:7127549-7128862	0	-	7128294	7128775	789624	3	163,192,160,	0,690,1153,
#Deleted in new
chr12	7129078	7130252	chr12:7129078-7130252	1	-	7129078	7129078	8553170	2	209,540,	0,634,
#Deleted in new
chr12	7129507	7131198	chr12:7129507-7131198	3	-	7129507	7129507	8553170	3	510,51,174,	0,815,1517,
#Deleted in new
chr12	7129697	7135345	chr12:7129697-7135345	0	+	7130648	7135345	789624	5	99,133,123,196,19,	0,882,3326,3875,5629,
#Partially deleted in new
chr12	7130198	7158945	chr12:7130198-7158945	3	+	7130648	7158081	789624	18	514,123,196,209,150,186,282,113,163,54,158,149,227,171,146,136,203,1005,	0,2825,3374,5128,5605,6007,6630,7756,11043,11887,12670,12964,18773,19324,20345,20729,27290,27742,
#Deleted in new
chr12	7130427	7136844	chr12:7130427-7136844	0	+	7130427	7130427	8553170	6	57,53,209,150,186,16,	0,3288,4899,5376,5778,6401,
#Deleted in new
chr12	7130754	7135481	chr12:7130754-7135481	0	+	7133070	7135481	789624	4	59,123,196,155,	0,2269,2818,4572,
#Deleted in new
chr12	7131087	7135443	chr12:7131087-7135443	0	+	7133070	7135443	789624	4	97,123,196,117,	0,1936,2485,4239,
#Deleted in new
chr12	7131319	7135518	chr12:7131319-7135518	0	+	7133070	7135518	789624	4	36,123,196,192,	0,1704,2253,4007,
#Deleted in new
chr12	7131785	7135524	chr12:7131785-7135524	0	+	7131825	7135524	789624	4	53,123,196,198,	0,1238,1787,3541,
#Partially deleted in new
chr12	7132385	7158932	chr12:7132385-7158932	0	+	7132385	7132385	8553170	17	761,196,209,150,186,282,113,163,54,158,149,227,171,146,136,203,992,	0,1187,2941,3418,3820,4443,5569,8856,9700,10483,10777,16586,17137,18158,18542,25103,25555,
#Deleted in new
chr12	7132904	7133913	chr12:7132904-7133913	0	+	7132904	7132904	8553170	2	242,341,	0,668,
#Deleted in new
chr12	7135448	7137315	chr12:7135448-7137315	0	+	7135448	7135448	8553170	4	87,150,186,487,	0,355,757,1380,
#Deleted in new
chr12	7136300	7138815	chr12:7136300-7138815	0	+	7136300	7136300	8553170	4	91,282,113,80,	0,528,1654,2435,
#Partially deleted in new
chr12	7138681	7143198	chr12:7138681-7143198	0	+	7138681	7138681	8553170	5	135,163,54,158,36,	0,2560,3404,4187,4481,
#Partially deleted in new
chr12	7143137	7149689	chr12:7143137-7149689	0	+	7143137	7143137	8553170	3	174,227,167,	0,5834,6385,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	7146481	7147817	chr12:7146481-7147817	3	-	7146481	7146481	8553170	2	541,183,	0,1153,
#Deleted in new
chr12	7150522	7151150	chr12:7150522-7151150	0	+	7150522	7150522	8553170	2	167,223,	0,405,
#Deleted in new
chr12	7155867	7158305	chr12:7155867-7158305	1	+	7156178	7158081	8553170	3	1062,203,365,	0,1621,2073,
#Deleted in new
chr12	7155904	7158945	chr12:7155904-7158945	1	+	7156178	7157999	8553170	3	1025,258,1005,	0,1584,2036,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	7166673	7189069	chr12:7166673-7189069	0	-	7166673	7166673	8553170	2	116,324,	0,22072,
#Partially deleted in new
chr12	7188684	7201795	chr12:7188684-7201795	0	+	7191291	7201795	789624	6	126,36,133,132,103,45,	0,2203,2541,2884,10326,13066,
#Partially deleted in new
chr12	7188723	7202343	chr12:7188723-7202343	0	+	7190377	7202343	789624	8	87,163,36,133,132,103,91,103,	0,1638,2164,2502,2845,10287,13027,13517,
#Partially deleted in new
chr12	7189162	7218571	chr12:7189162-7218571	3	+	7190377	7210223	0	18	369,195,163,36,133,132,103,91,111,93,120,144,71,213,166,158,221,170,	0,859,1199,1725,2063,2406,9848,12588,13078,13449,14269,18496,18847,19294,19842,20520,20859,29239,
#Deleted in new
chr12	7189212	7191348	chr12:7189212-7191348	0	+	7190377	7191348	789624	4	319,163,36,123,	0,1149,1675,2013,
#Partially deleted in new
chr12	7189583	7211483	chr12:7189583-7211483	1	+	7190377	7210223	0	15	167,163,36,133,132,103,91,93,120,144,71,213,166,158,1462,	0,778,1304,1642,1985,9427,12167,13028,13848,18075,18426,18873,19421,20099,20438,
#Partially deleted in new
chr12	7189610	7201804	chr12:7189610-7201804	0	+	7191291	7201804	789624	7	50,40,36,133,132,103,54,	0,874,1277,1615,1958,9400,12140,
#Partially deleted in new
chr12	7189685	7202336	chr12:7189685-7202336	0	+	7189685	7189685	8553170	6	65,36,133,132,91,96,	0,1202,1540,1883,12065,12555,
#Partially deleted in new
chr12	7189686	7210431	chr12:7189686-7210431	1	+	7190377	7210223	0	16	64,208,36,133,132,103,91,111,93,120,144,71,213,166,158,410,	0,675,1201,1539,1882,9324,12064,12554,12925,13745,17972,18323,18770,19318,19996,20335,
#Deleted in new
chr12	7189696	7191356	chr12:7189696-7191356	0	+	7190377	7191356	789624	5	54,195,163,36,131,	0,325,665,1191,1529,
#Partially deleted in new
chr12	7189706	7203550	chr12:7189706-7203550	0	+	7190377	7203550	789624	8	44,163,133,132,103,91,93,119,	0,655,1519,1862,9304,12044,12905,13725,
#Partially deleted in new
chr12	7189714	7210262	chr12:7189714-7210262	1	+	7190377	7210223	0	16	502,163,36,133,132,103,91,111,93,120,144,71,213,166,158,241,	0,647,1173,1511,1854,9296,12036,12526,12897,13717,17944,18295,18742,19290,19968,20307,
#Partially deleted in new
chr12	7189844	7210256	chr12:7189844-7210256	1	+	7189933	7210223	789624	16	136,163,36,133,132,103,91,111,93,120,144,71,213,166,158,235,	0,517,1043,1381,1724,9166,11906,12396,12767,13587,17814,18165,18612,19160,19838,20177,
#Partially deleted in new
chr12	7189955	7208596	chr12:7189955-7208596	0	+	7190377	7208596	789624	12	261,208,36,133,132,103,91,93,96,144,71,140,	0,406,932,1270,1613,9055,11795,12656,13500,17703,18054,18501,
#Deleted in new
chr12	7190088	7190793	chr12:7190088-7190793	0	+	7190088	7190088	8553170	2	128,432,	0,273,
#Deleted in new
chr12	7190152	7191594	chr12:7190152-7191594	0	+	7190377	7191594	789624	4	372,36,133,26,	0,735,1073,1416,
#Partially deleted in new
chr12	7190360	7211480	chr12:7190360-7211480	1	+	7190377	7210223	0	15	164,36,133,132,103,91,111,93,96,144,71,213,166,158,1459,	0,527,865,1208,8650,11390,11880,12251,13095,17298,17649,18096,18644,19322,19661,
#Partially deleted in new
chr12	7190360	7201791	chr12:7190360-7201791	0	+	7190377	7201791	789624	5	164,36,133,132,57,	0,527,865,1208,11374,
#Partially deleted in new
chr12	7190811	7201832	chr12:7190811-7201832	0	+	7191291	7201832	789624	5	112,133,132,103,82,	0,414,757,8199,10939,
#Partially deleted in new
chr12	7191571	7202226	chr12:7191571-7202226	0	+	7191571	7191571	8553170	3	129,103,476,	0,7439,10179,
#Partially deleted in new
chr12	7210129	7218574	chr12:7210129-7218574	0	+	7210129	7210223	789624	3	113,100,173,	0,2642,8272,
#Partially deleted in new
chr12	7237431	7240986	chr12:7237431-7240986	7	+	7237431	7237431	16724991	2	106,132,	0,3423,
#Partially deleted in new
chr12	7304283	7328724	chr12:7304283-7328724	3	+	7304331	7328373	789624	13	249,211,208,144,157,80,124,81,102,128,100,120,438,	0,2249,6255,12853,13742,16441,18134,18950,19175,19989,20215,22692,24003,
#Partially deleted in new
chr12	7310672	7318517	chr12:7310672-7318517	0	+	7310672	7310672	8553170	3	74,144,492,	0,6464,7353,
#Partially deleted in new
chr12	7346684	7368970	chr12:7346684-7368970	0	-	7357403	7368970	789624	5	463,107,96,111,38,	0,10695,20551,21402,22248,
#Partially deleted in new
chr12	7354959	7444185	chr12:7354959-7444185	3	-	7357403	7444127	789624	20	171,107,96,111,33,309,321,315,93,315,315,321,321,321,321,321,321,321,93,89,	0,2420,12276,13127,13973,14397,18360,19482,19871,20321,20740,24018,41135,43304,48575,51572,77456,78414,86194,89137,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	7354959	7357606	chr12:7354959-7357606	0	-	7354959	7354959	8553170	2	171,227,	0,2420,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	7354959	7367548	chr12:7354959-7367548	0	-	7354959	7354959	8553170	3	171,107,313,	0,2420,12276,
#Partially deleted in new
chr12	7354962	7444146	chr12:7354962-7444146	1	-	7357403	7444127	789624	20	168,107,96,111,33,309,321,315,93,315,315,321,321,321,321,321,321,351,93,50,	0,2417,12273,13124,13970,14394,18357,19479,19868,20318,20737,24015,41132,43301,48572,51569,77453,78381,86191,89134,
#Partially deleted in new
chr12	7355041	7368970	chr12:7355041-7368970	0	-	7368060	7368970	789624	5	89,107,96,140,38,	0,2338,12194,13016,13891,
#Deleted in new
chr12	7368836	7369493	chr12:7368836-7369493	0	-	7368836	7368836	8553170	2	129,137,	0,520,
#Partially deleted in new
chr12	7375509	7379266	chr12:7375509-7379266	0	-	7375509	7375509	8553170	4	86,315,132,30,	0,190,3468,3727,
#Partially deleted in new
chr12	7396193	7403880	chr12:7396193-7403880	0	-	7396193	7403880	789624	2	222,346,	0,7341,
#Partially deleted in new
chr12	7432708	7479897	chr12:7432708-7479897	0	-	7432708	7433530	789624	5	28,321,93,52,38,	0,665,8445,18295,47151,
#Deleted in new
chr12	7438779	7439990	chr12:7438779-7439990	7	-	7438779	7438779	16724991	1	1211,	0,
#Partially deleted in new
chr12	7470812	7503893	chr12:7470812-7503893	3	-	7479868	7503690	789624	17	585,137,96,120,39,309,321,315,93,315,315,321,321,321,324,87,249,	0,9047,10348,11830,12153,12554,14283,15686,16081,16546,16960,24268,26000,28055,30326,31665,32832,
#Partially deleted in new
chr12	7470815	7503776	chr12:7470815-7503776	0	-	7470815	7470815	8553170	16	582,1397,120,39,309,321,315,93,315,315,321,321,321,324,87,132,	0,9044,11827,12150,12551,14280,15683,16078,16543,16957,24265,25997,28052,30323,31662,32829,
#Partially deleted in new
chr12	7471175	7483574	chr12:7471175-7483574	0	-	7479868	7483574	789624	4	222,137,39,208,	0,8684,11790,12191,
#Partially deleted in new
chr12	7471179	7503776	chr12:7471179-7503776	1	-	7479890	7503690	789624	16	218,54,96,120,39,309,321,315,93,729,321,321,321,324,87,132,	0,8680,9981,11463,11786,12187,13916,15319,15714,16179,23901,25633,27688,29959,31298,32465,
#Partially deleted in new
chr12	7471179	7503776	chr12:7471179-7503776	1	-	7479890	7503690	789624	17	218,54,96,120,39,309,321,315,93,315,315,321,321,321,324,87,132,	0,8680,9981,11463,11786,12187,13916,15319,15714,16179,16593,23901,25633,27688,29959,31298,32465,
#Partially deleted in new
chr12	7471179	7483492	chr12:7471179-7483492	0	-	7479868	7483492	789624	5	218,137,120,39,126,	0,8680,11463,11786,12187,
#Partially deleted in new
chr12	7471179	7502737	chr12:7471179-7502737	1	-	7479890	7502726	789624	17	218,54,96,120,39,309,321,315,93,315,315,321,321,321,324,87,21,	0,8680,9981,11463,11786,12187,13916,15319,15714,16179,16593,23901,25633,27688,29959,31298,31537,
#Partially deleted in new
chr12	7483293	7485418	chr12:7483293-7485418	0	-	7483293	7483293	8553170	2	382,323,	0,1802,
#Partially deleted in new
chr12	7483399	7485344	chr12:7483399-7485344	0	-	7483399	7483399	8553170	2	299,249,	0,1696,
#Deleted in new
chr12	7566368	7567382	chr12:7566368-7567382	7	+	7566368	7566368	16724991	1	1014,	0,
#Partially deleted in new
chr12	7604349	7605214	chr12:7604349-7605214	7	-	7604349	7604349	16724991	1	865,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	7606833	7607331	chr12:7606833-7607331	7	+	7606833	7606833	16724991	1	498,	0,
#Deleted in new
chr12	7619871	7620260	chr12:7619871-7620260	7	-	7619871	7619871	16724991	1	389,	0,
#Deleted in new
chr12	7620541	7621450	chr12:7620541-7621450	7	+	7620541	7620541	16724991	3	102,213,228,	0,193,681,
#Deleted in new
chr12	7626102	7626486	chr12:7626102-7626486	7	+	7626102	7626102	16724991	1	384,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	7637395	7647086	chr12:7637395-7647086	7	-	7637395	7637395	16724991	2	342,372,	0,9319,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	7649399	7665893	chr12:7649399-7665893	3	-	7649546	7665872	789624	5	297,119,398,28,37,	0,1623,3038,5205,16457,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	7649399	7665903	chr12:7649399-7665903	0	-	7652740	7665872	789624	4	297,119,398,47,	0,1623,3038,16457,
#Partially deleted in new
chr12	7689781	7695776	chr12:7689781-7695776	3	-	7689877	7695728	789624	2	923,316,	0,5679,
#Partially deleted in new
chr12	7711453	7717559	chr12:7711453-7717559	3	+	7711570	7717077	789624	4	199,245,42,593,	0,3729,4744,5513,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	7729414	7751605	chr12:7729414-7751605	1	-	7729595	7747348	0	7	326,116,146,111,164,87,176,	0,1382,8014,12006,17903,19698,22015,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	7729414	7749473	chr12:7729414-7749473	3	-	7729595	7747348	0	7	326,116,146,111,93,161,361,	0,1382,8014,12006,16916,17903,19698,
#Partially deleted in new
chr12	7729441	7747522	chr12:7729441-7747522	1	-	7729595	7747348	0	6	299,116,146,111,93,205,	0,1355,7987,11979,16889,17876,
#Partially deleted in new
chr12	7729441	7747505	chr12:7729441-7747505	1	-	7729595	7747348	0	5	299,116,146,111,188,	0,1355,7987,11979,17876,
#Partially deleted in new
chr12	7729442	7737575	chr12:7729442-7737575	0	-	7730792	7737575	789624	3	298,132,147,	0,1338,7986,
#Partially deleted in new
chr12	7729703	7747339	chr12:7729703-7747339	0	-	7729703	7747339	789624	5	37,116,146,93,22,	0,1093,7725,16627,17614,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	7765215	7774121	chr12:7765215-7774121	3	+	7765285	7773851	789624	4	172,333,80,322,	0,4767,5223,8584,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	7766081	7774121	chr12:7766081-7774121	1	+	7766125	7773851	789624	4	89,333,80,322,	0,3901,4357,7718,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	7784402	7784511	chr12:7784402-7784511	3	-	7784402	7784402	8553170	1	109,	0,
#Partially deleted in new
chr12	7787793	7794808	chr12:7787793-7794808	0	+	7789686	7794808	789624	6	50,160,146,263,87,130,	0,625,1826,5156,6663,6885,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	7789395	7799141	chr12:7789395-7799141	3	+	7789614	7795095	0	4	370,263,87,4463,	0,3554,5061,5283,
#Partially deleted in new
chr12	7789432	7793212	chr12:7789432-7793212	0	+	7789432	7789432	8553170	2	333,225,	0,3555,
#Partially deleted in new
chr12	7789614	7795095	chr12:7789614-7795095	1	+	7789614	7795095	0	4	151,263,87,369,	0,3335,4842,5112,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	7800360	7800467	chr12:7800360-7800467	3	-	7800360	7800360	8553170	1	107,	0,
#Partially deleted in new
chr12	7812511	7872852	chr12:7812511-7872852	1	-	7814315	7869880	789624	13	2023,204,102,105,188,163,241,161,93,75,222,76,46,	0,5319,6970,8709,14983,16192,17254,19092,20210,57351,58329,59361,60295,
#Partially deleted in new
chr12	7812512	7832816	chr12:7812512-7832816	1	-	7814315	7832735	789624	8	2022,204,102,105,188,163,241,95,	0,5318,6969,8708,14982,16191,17253,20209,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	7812512	7863455	chr12:7812512-7863455	1	-	7814315	7863455	789624	10	2022,204,102,105,188,163,241,161,93,87,	0,5318,6969,8708,14982,16191,17253,19091,20209,50856,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	7812513	7872824	chr12:7812513-7872824	3	-	7814315	7863455	789624	16	2021,204,102,105,188,163,241,161,93,89,75,222,105,76,262,18,	0,5317,6968,8707,14981,16190,17252,19090,20208,50855,57349,58327,58665,59359,59597,60293,
#Partially deleted in new
chr12	7812518	7872916	chr12:7812518-7872916	1	-	7814315	7869880	789624	11	2016,204,102,105,188,163,241,161,93,75,110,	0,5312,6963,8702,14976,16185,17247,19085,20203,57344,60288,
#Partially deleted in new
chr12	7813528	7873251	chr12:7813528-7873251	1	-	7814315	7819544	789624	5	1006,204,102,105,233,	0,4302,5953,7692,59490,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	7813800	7873039	chr12:7813800-7873039	1	-	7814315	7863455	789624	12	734,204,102,105,188,163,241,161,93,89,75,180,	0,4030,5681,7420,13694,14903,15965,17803,18921,49568,56062,59059,
#Partially deleted in new
chr12	7814019	7872852	chr12:7814019-7872852	1	-	7814315	7832735	789624	10	515,204,102,105,188,163,241,93,75,46,	0,3811,5462,7201,13475,14684,15746,18702,55843,58787,
#Partially deleted in new
chr12	7814071	7891148	chr12:7814071-7891148	1	-	7814315	7891127	789624	10	463,204,102,105,188,163,241,161,93,153,	0,3759,5410,7149,13423,14632,15694,17532,18650,76924,
#Partially deleted in new
chr12	7829771	7872874	chr12:7829771-7872874	0	-	7829771	7869880	789624	6	235,161,93,75,222,68,	0,1832,2950,40091,41069,43035,
#Partially deleted in new
chr12	7829821	7873027	chr12:7829821-7873027	0	-	7829821	7869880	789624	5	185,161,93,75,168,	0,1782,2900,40041,43038,
#Partially deleted in new
chr12	7829855	7872802	chr12:7829855-7872802	0	-	7829855	7869880	789624	5	151,161,93,75,81,	0,1748,2866,40007,42866,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	7829923	7872883	chr12:7829923-7872883	0	-	7829923	7863455	789624	6	83,161,93,89,75,77,	0,1680,2798,33445,39939,42883,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	7829987	7873114	chr12:7829987-7873114	0	-	7829987	7863455	789624	6	19,161,93,89,75,96,	0,1616,2734,33381,39875,43031,
#Partially deleted in new
chr12	7831263	7832765	chr12:7831263-7832765	0	-	7831263	7831263	8553170	2	501,44,	0,1458,
#Partially deleted in new
chr12	7831622	7872380	chr12:7831622-7872380	0	-	7831622	7869880	789624	4	142,93,75,270,	0,1099,38240,40488,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	7831648	7872861	chr12:7831648-7872861	0	-	7839821	7869880	789624	5	116,93,204,75,55,	0,1073,8068,38214,41158,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	7831733	7873484	chr12:7831733-7873484	0	-	7831733	7869880	789624	4	31,93,75,466,	0,988,38129,41285,
#Partially deleted in new
chr12	7832765	7872880	chr12:7832765-7872880	0	-	7832765	7869880	789624	6	49,75,222,105,76,21,	0,37097,38075,38413,39107,40094,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	7850716	7850818	chr12:7850716-7850818	3	-	7850716	7850716	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	7856168	7856471	chr12:7856168-7856471	3	+	7856168	7856168	8553170	1	303,	0,
#Deleted in new
chr12	7860436	7860764	chr12:7860436-7860764	7	+	7860436	7860436	16724991	1	328,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	7863436	7872852	chr12:7863436-7872852	0	-	7863436	7869880	789624	5	21,75,222,76,46,	0,6426,7404,8436,9370,
#Deleted in new
chr12	7870849	7872864	chr12:7870849-7872864	0	-	7870849	7870849	8553170	4	213,105,76,58,	0,329,1023,1957,
#Deleted in new
chr12	7870851	7871370	chr12:7870851-7871370	7	+	7870851	7870851	16724991	1	519,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	7890800	7900140	chr12:7890800-7900140	7	+	7890800	7890800	16724991	6	50,146,263,87,779,657,	0,1780,4676,7464,7734,8683,
#Partially deleted in new
chr12	7892575	7898903	chr12:7892575-7898903	5	+	7892575	7892575	16724991	4	151,263,87,414,	0,2901,5689,5914,
#Partially deleted in new
chr12	7896607	7896956	chr12:7896607-7896956	7	-	7896607	7896607	16724991	1	349,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	7919229	7936275	chr12:7919229-7936275	3	-	7921412	7936034	0	10	2402,204,102,105,188,163,241,161,93,256,	0,3591,5180,6614,10454,11250,12015,13757,14580,16790,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	7919230	7936167	chr12:7919230-7936167	0	-	7919230	7919230	8553170	9	2401,204,102,105,959,241,161,93,148,	0,3590,5179,6613,10453,12014,13756,14579,16789,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	7919230	7919750	chr12:7919230-7919750	0	-	7919230	7919230	8553170	2	298,85,	0,435,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	7921070	7923289	chr12:7921070-7923289	0	-	7921070	7921070	8553170	2	561,469,	0,1750,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	7921544	7930055	chr12:7921544-7930055	0	-	7921544	7921544	8553170	5	87,204,102,105,372,	0,1276,2865,4299,8139,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	7925357	7930035	chr12:7925357-7930035	0	-	7925357	7925357	8553170	2	591,352,	0,4326,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	7929503	7936169	chr12:7929503-7936169	0	-	7929503	7929503	8553170	5	1139,241,161,93,150,	0,1741,3483,4306,6516,
#Partially deleted in new
chr12	7930634	7936186	chr12:7930634-7936186	0	-	7930634	7936034	789624	4	8,241,161,167,	0,610,2352,5385,
#Partially deleted in new
chr12	7931350	7936187	chr12:7931350-7936187	0	-	7933140	7936034	789624	4	135,193,93,168,	0,1636,2459,4669,
#Partially deleted in new
chr12	7932645	7936187	chr12:7932645-7936187	0	-	7932645	7932645	8553170	3	502,93,168,	0,1164,3374,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	7933477	7936184	chr12:7933477-7936184	0	-	7933477	7933477	8553170	2	425,165,	0,2542,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	7976258	7976360	chr12:7976258-7976360	3	+	7976258	7976258	8553170	1	102,	0,
#Deleted in new
chr12	7994769	7995084	chr12:7994769-7995084	7	-	7994769	7994769	16724991	1	315,	0,
#Partially deleted in new
chr12	8014092	8019007	chr12:8014092-8019007	3	-	8014092	8014092	8553170	2	453,108,	0,4807,
#Partially deleted in new
chr12	8015023	8016406	chr12:8015023-8016406	7	+	8015023	8015023	16724991	2	639,430,	0,953,
#Deleted in new
chr12	8017200	8017860	chr12:8017200-8017860	7	-	8017200	8017200	16724991	1	660,	0,
#Partially deleted in new
chr12	8032702	8055503	chr12:8032702-8055503	3	+	8039832	8052850	789624	11	1131,347,75,69,141,199,408,102,210,99,2742,	0,7116,9955,10998,11248,12057,15179,15994,16659,17819,20059,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	8033359	8050222	chr12:8033359-8050222	1	+	8039832	8049615	789624	9	474,347,75,69,141,199,408,102,861,	0,6459,9298,10341,10591,11400,14522,15337,16002,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	8058301	8066471	chr12:8058301-8066471	3	-	8058736	8060185	789624	2	1894,194,	0,7976,
#Partially deleted in new
chr12	8059745	8066337	chr12:8059745-8066337	0	-	8059745	8060185	789624	2	450,117,	0,6475,
#Partially deleted in new
chr12	8076938	8097859	chr12:8076938-8097859	3	+	8082288	8096090	789624	9	454,523,101,105,82,109,184,103,1818,	0,4922,12997,13256,14830,15737,15933,18662,19103,
#Deleted in new
chr12	8080380	8082163	chr12:8080380-8082163	3	-	8080380	8080380	8553170	1	1783,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	8081894	8097740	chr12:8081894-8097740	0	+	8081894	8081894	8553170	6	489,101,2590,184,103,1699,	0,8041,8300,10977,13706,14147,
#Partially deleted in new
chr12	8082210	8097777	chr12:8082210-8097777	1	+	8082288	8096090	789624	8	173,101,105,82,109,184,103,1736,	0,7725,7984,9558,10465,10661,13390,13831,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	8082227	8090815	chr12:8082227-8090815	0	+	8082227	8082227	8553170	2	156,880,	0,7708,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	8082254	8093818	chr12:8082254-8093818	0	+	8082254	8082254	8553170	4	129,101,105,2050,	0,7681,7940,9514,
#Partially deleted in new
chr12	8082265	8097768	chr12:8082265-8097768	1	+	8082288	8096090	789624	8	118,101,105,82,109,172,103,1727,	0,7670,7929,9503,10410,10606,13335,13776,
#Partially deleted in new
chr12	8082267	8097769	chr12:8082267-8097769	0	+	8082288	8092683	789624	7	116,101,105,109,184,103,1728,	0,7668,7927,10408,10604,13333,13774,
#Partially deleted in new
chr12	8082267	8097729	chr12:8082267-8097729	0	+	8082267	8082267	8553170	7	116,364,82,109,184,103,1688,	0,7668,9501,10408,10604,13333,13774,
#Partially deleted in new
chr12	8082268	8121795	chr12:8082268-8121795	2	+	8082268	8082268	8553170	4	115,101,105,888,	0,7667,7926,38639,
#Partially deleted in new
chr12	8082270	8097738	chr12:8082270-8097738	0	+	8082288	8092696	789624	8	113,101,105,11,109,184,103,1697,	0,7665,7924,9569,10405,10601,13330,13771,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	8082270	8097738	chr12:8082270-8097738	0	+	8082288	8094727	789624	9	113,101,105,82,109,184,93,103,1697,	0,7665,7924,9498,10405,10601,12380,13330,13771,
#Partially deleted in new
chr12	8082273	8097738	chr12:8082273-8097738	0	+	8082273	8082273	8553170	7	110,101,105,82,380,103,1697,	0,7662,7921,9495,10402,13327,13768,
#Partially deleted in new
chr12	8082276	8097738	chr12:8082276-8097738	0	+	8082276	8082276	8553170	7	107,101,105,1016,184,103,1697,	0,7659,7918,9492,10595,13324,13765,
#Partially deleted in new
chr12	8082276	8097761	chr12:8082276-8097761	0	+	8082288	8092696	789624	7	107,101,149,109,184,103,1720,	0,7659,7918,10399,10595,13324,13765,
#Partially deleted in new
chr12	8082279	8097759	chr12:8082279-8097759	0	+	8082279	8082279	8553170	6	104,101,105,1287,103,1718,	0,7656,7915,9489,13321,13762,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	8082279	8097771	chr12:8082279-8097771	0	+	8082279	8082279	8553170	5	104,101,2861,103,1730,	0,7656,7915,13321,13762,
#Partially deleted in new
chr12	8082279	8097511	chr12:8082279-8097511	0	+	8082288	8092903	789624	6	104,101,105,184,103,1470,	0,7656,7915,10592,13321,13762,
#Partially deleted in new
chr12	8082279	8097738	chr12:8082279-8097738	1	+	8082288	8096090	789624	5	104,109,184,103,1697,	0,10396,10592,13321,13762,
#Partially deleted in new
chr12	8082279	8097531	chr12:8082279-8097531	1	+	8082288	8096130	789624	7	104,101,105,82,109,184,1490,	0,7656,7915,9489,10396,10592,13762,
#Partially deleted in new
chr12	8082280	8095656	chr12:8082280-8095656	0	+	8082288	8095656	789624	7	103,101,105,82,109,184,44,	0,7655,7914,9488,10395,10591,13332,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	8082290	8097735	chr12:8082290-8097735	0	+	8082290	8082290	8553170	7	93,101,1656,109,184,103,1694,	0,7645,7904,10385,10581,13310,13751,
#Partially deleted in new
chr12	8082299	8097735	chr12:8082299-8097735	0	+	8082299	8082299	8553170	7	84,101,105,945,184,103,1694,	0,7636,7895,9540,10572,13301,13742,
#Partially deleted in new
chr12	8082307	8097411	chr12:8082307-8097411	0	+	8082307	8082307	8553170	6	76,364,1016,184,103,1370,	0,7628,9461,10564,13293,13734,
#Partially deleted in new
chr12	8082786	8095700	chr12:8082786-8095700	0	+	8092718	8095700	789624	7	182,101,105,82,109,184,100,	0,7149,7408,8982,9889,10085,12814,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	8088889	8097767	chr12:8088889-8097767	0	+	8088889	8088889	8553170	7	1147,105,82,109,184,103,1726,	0,1305,2879,3786,3982,6711,7152,
#Partially deleted in new
chr12	8091841	8097727	chr12:8091841-8097727	0	+	8091841	8092932	789624	4	9,184,103,1686,	0,1030,3759,4200,
#Partially deleted in new
chr12	8092880	8096153	chr12:8092880-8096153	0	+	8092880	8095707	789624	2	175,553,	0,2720,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	8095277	8097730	chr12:8095277-8097730	0	+	8095277	8095277	8553170	2	426,1689,	0,764,
#Partially deleted in new
chr12	8096206	8138548	chr12:8096206-8138548	1	+	8096206	8096206	8553170	7	106,199,117,99,152,116,409,	0,24701,29354,33057,39378,40581,41933,
#Partially deleted in new
chr12	8123631	8138607	chr12:8123631-8138607	3	+	8123878	8138287	0	6	329,117,99,152,116,468,	0,1929,5632,11953,13156,14508,
#Partially deleted in new
chr12	8123852	8138604	chr12:8123852-8138604	1	+	8123878	8138287	0	4	108,152,116,465,	0,11732,12935,14287,
#Partially deleted in new
chr12	8123878	8138287	chr12:8123878-8138287	1	+	8123878	8138287	0	5	82,117,152,116,148,	0,1682,11706,12909,14261,
#Partially deleted in new
chr12	8123878	8138287	chr12:8123878-8138287	1	+	8123878	8138287	0	5	82,99,152,116,148,	0,5385,11706,12909,14261,
#Partially deleted in new
chr12	8123911	8138206	chr12:8123911-8138206	0	+	8123911	8136876	789624	4	49,117,116,67,	0,1649,12876,14228,
#Deleted in new
chr12	8133771	8134849	chr12:8133771-8134849	7	-	8133771	8133771	16724991	1	1078,	0,
#Partially deleted in new
chr12	8138139	8175320	chr12:8138139-8175320	3	+	8138139	8174326	789624	5	114,79,83,127,93,	0,18874,34415,36186,37088,
#Partially deleted in new
chr12	8141167	8142697	chr12:8141167-8142697	7	-	8141167	8141167	16724991	2	60,379,	0,1151,
#Partially deleted in new
chr12	8157033	8177301	chr12:8157033-8177301	0	+	8172625	8177301	789624	6	59,83,127,96,83,303,	0,15521,17292,18194,18826,19965,
#Partially deleted in new
chr12	8168841	8179942	chr12:8168841-8179942	3	+	8172625	8177583	789624	6	45,83,127,96,83,2944,	0,3713,5484,6386,7018,8157,
#Partially deleted in new
chr12	8172536	8180046	chr12:8172536-8180046	1	+	8172625	8177583	789624	5	101,127,96,83,3048,	0,1789,2691,3323,4462,
#Partially deleted in new
chr12	8175856	8188537	chr12:8175856-8188537	0	+	8175856	8188503	789624	3	86,187,66,	0,1142,12615,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	8180208	8216151	chr12:8180208-8216151	0	+	8180208	8180208	8553170	7	544,494,174,279,68,262,346,	0,7523,8263,13994,14520,16048,35597,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	8180208	8204386	chr12:8180208-8204386	1	+	8180208	8180208	8553170	4	544,64,279,329,	0,8263,13994,23849,
#Partially deleted in new
chr12	8180221	8201000	chr12:8180221-8201000	1	+	8180221	8180221	8553170	6	531,174,279,84,262,1293,	0,8250,13981,14491,16035,19486,
#Partially deleted in new
chr12	8180268	8199881	chr12:8180268-8199881	1	+	8180268	8180268	5263520	8	484,494,174,136,279,84,262,174,	0,7463,8203,13251,13934,14444,15988,19439,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	8188484	8216035	chr12:8188484-8216035	3	+	8188484	8188484	8553170	4	51,279,118,230,	0,5718,15573,27321,
#Deleted in new
chr12	8194203	8196518	chr12:8194203-8196518	0	+	8194203	8194203	8553170	3	278,68,262,	0,525,2053,
#Deleted in new
chr12	8194298	8195276	chr12:8194298-8195276	0	+	8194298	8194298	8553170	4	29,62,68,344,	0,121,430,634,
#Deleted in new
chr12	8194429	8195652	chr12:8194429-8195652	0	+	8194429	8194429	8553170	3	52,68,376,	0,299,847,
#Partially deleted in new
chr12	8199598	8206710	chr12:8199598-8206710	5	-	8199598	8199598	16724991	2	222,55,	0,7057,
#Partially deleted in new
chr12	8199688	8218911	chr12:8199688-8218911	7	-	8199688	8199688	16724991	3	116,169,224,	0,6962,18999,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	8205983	8207397	chr12:8205983-8207397	3	+	8205983	8205983	8553170	1	1414,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	8217757	8221115	chr12:8217757-8221115	3	+	8217757	8217757	8553170	1	3358,	0,
#Partially deleted in new
chr12	8221259	8227601	chr12:8221259-8227601	1	-	8221821	8224832	789624	6	1525,109,200,179,207,122,	0,2189,2756,3450,5012,6220,
#Partially deleted in new
chr12	8221262	8227618	chr12:8221262-8227618	3	-	8221821	8224832	789624	7	1522,109,200,179,157,207,139,	0,2186,2753,3447,4573,5009,6217,
#Partially deleted in new
chr12	8224790	8227587	chr12:8224790-8227587	0	-	8224790	8224832	789624	4	98,179,207,108,	0,1045,1481,2689,
#Partially deleted in new
chr12	8227733	8231764	chr12:8227733-8231764	7	+	8227733	8227733	16724991	4	112,115,76,127,	0,1715,2837,3904,
#Partially deleted in new
chr12	8232511	8242948	chr12:8232511-8242948	7	-	8232511	8232511	16724991	8	94,151,259,134,100,78,61,92,	0,1764,2746,3089,4461,6160,8134,10345,
#Partially deleted in new
chr12	8234341	8242948	chr12:8234341-8242948	5	-	8234341	8234341	16724991	7	84,266,134,102,83,61,99,	0,911,1259,2629,4325,6300,8508,
#Partially deleted in new
chr12	8235414	8238946	chr12:8235414-8238946	1	+	8235414	8235414	789624	2	585,210,	0,3322,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	8235881	8238173	chr12:8235881-8238173	1	+	8235881	8235881	8553170	2	118,399,	0,1893,
#Partially deleted in new
chr12	8235929	8242564	chr12:8235929-8242564	3	+	8235929	8235929	789624	3	70,178,203,	0,2807,6432,
#Partially deleted in new
chr12	8254526	8308855	chr12:8254526-8308855	7	-	8254526	8254526	16724991	3	610,163,258,	0,9908,54071,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	8295985	8396803	chr12:8295985-8396803	3	-	8295985	8295985	8553170	5	1633,135,184,700,381,	0,12612,20370,94284,100437,
#Deleted in new
chr12	8340181	8340397	chr12:8340181-8340397	7	+	8340181	8340181	16724991	1	216,	0,
#Partially deleted in new
chr12	8356962	8390752	chr12:8356962-8390752	0	-	8356962	8356962	789624	2	179,483,	0,33307,
#Partially deleted in new
chr12	8356962	8374513	chr12:8356962-8374513	0	-	8356962	8356962	8553170	4	179,217,131,97,	0,13250,14347,17454,
#Partially deleted in new
chr12	8356962	8390337	chr12:8356962-8390337	0	-	8356962	8356962	8553170	3	179,217,51,	0,13250,33324,
#Partially deleted in new
chr12	8359053	8359834	chr12:8359053-8359834	7	-	8359053	8359053	16724991	1	781,	0,
#Deleted in new
chr12	8368991	8369360	chr12:8368991-8369360	5	+	8368991	8368991	16724991	1	369,	0,
#Partially deleted in new
chr12	8382843	8385727	chr12:8382843-8385727	0	-	8382843	8382843	8553170	2	232,40,	0,2844,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	8384104	8396495	chr12:8384104-8396495	1	-	8384104	8384104	8553170	7	317,156,159,1142,242,68,73,	0,1039,1583,2658,6165,6797,12318,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	8384116	8390420	chr12:8384116-8390420	0	-	8384116	8384116	8553170	2	305,151,	0,6153,
#Deleted in new
chr12	8390269	8390488	chr12:8390269-8390488	7	-	8390269	8390269	16724991	1	219,	0,
#Deleted in new
chr12	8396422	8396641	chr12:8396422-8396641	7	-	8396422	8396422	16724991	1	219,	0,
#Deleted in new
chr12	8406832	8407195	chr12:8406832-8407195	7	-	8406832	8406832	16724991	1	363,	0,
#Deleted in new
chr12	8414779	8415805	chr12:8414779-8415805	7	-	8414779	8414779	16724991	1	1026,	0,
#Deleted in new
chr12	8427639	8428610	chr12:8427639-8428610	7	-	8427639	8427639	16724991	1	971,	0,
#Deleted in new
chr12	8437402	8438425	chr12:8437402-8438425	7	-	8437402	8437402	16724991	1	1023,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	8455925	8478330	chr12:8455925-8478330	3	+	8456111	8477464	0	6	217,90,102,146,116,1011,	0,1972,3671,9558,20199,21394,
#Deleted in new
chr12	8460617	8461232	chr12:8460617-8461232	7	+	8460617	8460617	16724991	1	615,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	8484745	8484852	chr12:8484745-8484852	3	+	8484745	8484745	8553170	1	107,	0,
#Partially deleted in new
chr12	8509474	8520273	chr12:8509474-8520273	0	+	8513732	8520273	789624	6	77,102,93,111,152,48,	0,4184,5761,8689,9534,10751,
#Deleted in new
chr12	8512373	8512726	chr12:8512373-8512726	7	-	8512373	8512373	16724991	1	353,	0,
#Partially deleted in new
chr12	8513539	8522366	chr12:8513539-8522366	3	+	8513732	8521271	0	6	221,93,111,152,116,1243,	0,1696,4624,5469,6686,7584,
#Partially deleted in new
chr12	8533304	8540963	chr12:8533304-8540963	3	-	8534637	8540797	0	6	1505,116,152,90,93,203,	0,2785,3810,5912,6550,7456,
#Partially deleted in new
chr12	8534483	8540877	chr12:8534483-8540877	1	-	8539157	8540797	789624	4	326,165,93,117,	0,4658,5371,6277,
#Partially deleted in new
chr12	8534508	8540873	chr12:8534508-8540873	1	-	8534637	8540797	789624	5	301,116,107,93,113,	0,1581,4691,5346,6252,
#Partially deleted in new
chr12	8534580	8539255	chr12:8534580-8539255	0	-	8534716	8539255	789624	3	229,152,39,	0,2534,4636,
#Partially deleted in new
chr12	8534762	8540905	chr12:8534762-8540905	0	-	8539157	8540797	789624	5	47,116,165,93,145,	0,1327,4379,5092,5998,
#Partially deleted in new
chr12	8538953	8540901	chr12:8538953-8540901	0	-	8538953	8538953	8553170	3	353,93,141,	0,901,1807,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	8548360	8567613	chr12:8548360-8567613	3	-	8548360	8548360	8553170	3	301,141,120,	0,3639,19133,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	8592475	8592585	chr12:8592475-8592585	3	+	8592475	8592475	8553170	1	110,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	8597508	8597640	chr12:8597508-8597640	3	+	8597508	8597508	8553170	1	132,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	8602165	8612871	chr12:8602165-8612871	3	-	8604283	8612767	0	5	2172,116,271,148,112,	0,2641,3049,4699,10594,
#Partially deleted in new
chr12	8603685	8607016	chr12:8603685-8607016	0	-	8604326	8607016	789624	3	652,271,152,	0,1529,3179,
#Partially deleted in new
chr12	8604283	8612867	chr12:8604283-8612867	1	-	8604283	8612767	0	5	54,86,271,148,108,	0,523,931,2581,8476,
#Partially deleted in new
chr12	8604283	8607016	chr12:8604283-8607016	0	-	8604283	8607016	789624	2	54,152,	0,2581,
#Partially deleted in new
chr12	8604283	8612801	chr12:8604283-8612801	0	-	8604283	8604283	8553170	4	54,679,148,42,	0,523,2581,8476,
#Partially deleted in new
chr12	8604284	8607016	chr12:8604284-8607016	0	-	8604284	8607016	789624	4	53,116,271,152,	0,522,930,2580,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	8631544	8632259	chr12:8631544-8632259	3	-	8631544	8631544	8553170	1	715,	0,
#Partially deleted in new
chr12	8634366	8637608	chr12:8634366-8637608	7	+	8634366	8634366	16724991	2	1292,993,	0,2249,
#Partially deleted in new
chr12	8637345	8662073	chr12:8637345-8662073	0	-	8648090	8662073	789624	10	65,142,74,88,30,45,33,45,36,27,	0,10716,12155,13156,14316,17091,18069,18440,23517,24701,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	8641245	8650554	chr12:8641245-8650554	0	-	8648090	8650554	789624	4	119,142,74,53,	0,6816,8255,9256,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	8645955	8662812	chr12:8645955-8662812	3	-	8648090	8662104	789624	10	2248,74,88,30,45,33,45,36,60,186,	0,3545,4546,5706,8481,9459,9830,14907,16091,16671,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	8646489	8662884	chr12:8646489-8662884	1	-	8648090	8662104	789624	8	1714,74,88,33,45,36,60,258,	0,3011,4012,8925,9296,14373,15557,16137,
#Partially deleted in new
chr12	8647589	8662826	chr12:8647589-8662826	1	-	8648090	8662104	789624	9	614,74,88,45,33,45,36,60,200,	0,1911,2912,6847,7825,8196,13273,14457,15037,
#Partially deleted in new
chr12	8647637	8662687	chr12:8647637-8662687	1	-	8648090	8662104	789624	8	566,74,88,45,33,45,60,61,	0,1863,2864,6799,7777,8148,14409,14989,
#Partially deleted in new
chr12	8647876	8662689	chr12:8647876-8662689	0	-	8648547	8662104	789624	10	327,69,74,88,45,33,45,36,60,63,	0,610,1624,2625,6560,7538,7909,12986,14170,14750,
#Partially deleted in new
chr12	8647955	8662725	chr12:8647955-8662725	1	-	8648090	8662104	789624	7	248,45,33,45,36,60,99,	0,6481,7459,7830,12907,14091,14671,
#Partially deleted in new
chr12	8648090	8662104	chr12:8648090-8662104	1	-	8648090	8662104	789624	8	113,74,88,45,33,45,36,58,	0,1410,2411,6346,7324,7695,12772,13956,
#Partially deleted in new
chr12	8648101	8658578	chr12:8648101-8658578	0	-	8648101	8648101	8553170	8	102,74,88,30,45,33,45,53,	0,1399,2400,3560,6335,7313,7684,10424,
#Partially deleted in new
chr12	8648139	8662702	chr12:8648139-8662702	0	-	8648547	8662104	789624	11	64,69,74,88,30,45,33,45,36,60,76,	0,347,1361,2362,3522,6297,7275,7646,12723,13907,14487,
#Partially deleted in new
chr12	8650377	8662675	chr12:8650377-8662675	0	-	8650377	8650377	8553170	8	212,30,45,33,45,36,60,49,	0,1284,4059,5037,5408,10485,11669,12249,
#Partially deleted in new
chr12	8650563	8662619	chr12:8650563-8662619	0	-	8650563	8662104	789624	8	26,30,45,33,45,36,60,307,	0,1098,3873,4851,5222,10299,11483,11749,
#Partially deleted in new
chr12	8651728	8662888	chr12:8651728-8662888	0	-	8651728	8651728	8553170	7	45,45,33,45,36,60,262,	0,2708,3686,4057,9134,10318,10898,
#Partially deleted in new
chr12	8654263	8662888	chr12:8654263-8662888	0	-	8654263	8654263	8553170	6	218,33,45,36,60,262,	0,1151,1522,6599,7783,8363,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	8664010	8668980	chr12:8664010-8668980	0	+	8664010	8664010	8553170	2	105,348,	0,4622,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	8664036	8669011	chr12:8664036-8669011	3	+	8664036	8664036	8553170	2	79,383,	0,4592,
#Partially deleted in new
chr12	8678772	8679670	chr12:8678772-8679670	7	+	8678772	8678772	16724991	2	397,175,	0,723,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	8681599	8714161	chr12:8681599-8714161	0	+	8681599	8681599	8553170	2	219,351,	0,32211,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	8681690	8783095	chr12:8681690-8783095	0	+	8713866	8777670	789624	9	128,231,231,87,204,146,213,165,184,	0,32120,68171,70266,72199,91630,95899,98884,101221,
#Partially deleted in new
chr12	8697176	8750029	chr12:8697176-8750029	0	+	8713866	8750029	789624	3	156,231,168,	0,16634,52685,
#Partially deleted in new
chr12	8697680	8749971	chr12:8697680-8749971	0	+	8713866	8749971	789624	4	60,80,231,110,	0,537,16130,52181,
#Partially deleted in new
chr12	8697681	8750013	chr12:8697681-8750013	0	+	8697731	8750013	789624	4	97,80,231,152,	0,536,16129,52180,
#Partially deleted in new
chr12	8697899	8774405	chr12:8697899-8774405	1	+	8713866	8773784	789624	6	398,231,231,87,204,1085,	0,15911,51962,54057,55990,75421,
#Partially deleted in new
chr12	8697921	8777191	chr12:8697921-8777191	3	+	8713866	8773784	789624	7	376,830,231,231,87,204,3871,	0,1863,15889,51940,54035,55968,75399,
#Partially deleted in new
chr12	8698036	8777632	chr12:8698036-8777632	0	+	8698036	8698036	8553170	8	261,830,231,231,87,204,146,43,	0,1748,15774,51825,53920,55853,75284,79553,
#Partially deleted in new
chr12	8699845	8777190	chr12:8699845-8777190	1	+	8713866	8773784	789624	6	769,231,231,87,204,3870,	0,13965,50016,52111,54044,73475,
#Partially deleted in new
chr12	8713742	8783085	chr12:8713742-8783085	1	+	8713866	8777670	789624	8	299,231,87,204,146,213,165,174,	0,36119,38214,40147,59578,63847,66832,69169,
#Deleted in new
chr12	8742427	8743072	chr12:8742427-8743072	7	+	8742427	8742427	16724991	1	645,	0,
#Partially deleted in new
chr12	8776218	8830947	chr12:8776218-8830947	3	-	8776218	8776218	8553170	2	166,286,	0,54443,
#Partially deleted in new
chr12	8777589	8783095	chr12:8777589-8783095	0	+	8777589	8777589	8553170	4	213,78,165,184,	0,2445,2985,5322,
#Partially deleted in new
chr12	8779030	8783095	chr12:8779030-8783095	0	+	8779030	8779030	8553170	2	1709,184,	0,3881,
#Partially deleted in new
chr12	8779811	8783095	chr12:8779811-8783095	0	+	8779811	8779811	8553170	3	301,165,184,	0,763,3100,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	8788256	8794497	chr12:8788256-8794497	0	+	8788256	8788256	8553170	2	530,193,	0,6048,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	8788273	8795789	chr12:8788273-8795789	3	+	8788273	8788273	8553170	2	487,1485,	0,6031,
#Boundary problem: need 36, got 0, diff 36, mapped 0.0
chr12	8822471	8876785	chr12:8822471-8876785	3	+	8822651	8875011	789624	36	242,184,163,53,21,160,85,127,115,110,168,228,61,146,150,195,91,115,229,127,122,52,84,177,82,157,75,163,215,216,128,91,69,103,42,728,	0,710,1248,7255,12190,13035,13783,14968,15864,16641,18897,20662,22970,23605,25077,26248,27197,27688,29312,29738,31656,32308,33037,34692,35035,35474,38409,38663,41322,45370,45758,46065,46663,51953,52499,53586,
#Partially deleted in new
chr12	8823512	8834935	chr12:8823512-8834935	0	+	8823512	8823512	8553170	4	70,163,53,274,	0,207,6214,11149,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr12	8843235	8875814	chr12:8843235-8875814	0	+	8843235	8875011	789624	25	126,61,146,150,195,91,115,229,127,122,52,84,177,82,157,75,163,215,216,128,91,69,103,42,354,	0,2206,2841,4313,5484,6433,6924,8548,8974,10892,11544,12273,13928,14271,14710,17645,17899,20558,24606,24994,25301,25899,31189,31735,32225,
#Partially deleted in new
chr12	8844953	8846124	chr12:8844953-8846124	0	+	8845171	8846124	789624	3	353,61,48,	0,488,1123,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr12	8845003	8876456	chr12:8845003-8876456	1	+	8845171	8875011	789624	25	171,61,146,150,195,91,115,229,127,122,52,84,177,82,157,75,163,215,216,128,91,69,103,42,399,	0,438,1073,2545,3716,4665,5156,6780,7206,9124,9776,10505,12160,12503,12942,15877,16131,18790,22838,23226,23533,24131,29421,29967,31054,
#Partially deleted in new
chr12	8845280	8848901	chr12:8845280-8848901	0	+	8845299	8848901	789624	5	31,61,146,150,182,	0,161,796,2268,3439,
#Partially deleted in new
chr12	8845282	8848795	chr12:8845282-8848795	0	+	8845282	8845282	8553170	4	220,146,150,76,	0,794,2266,3437,
#Deleted in new
chr12	8857234	8857864	chr12:8857234-8857864	0	+	8857234	8857234	8553170	2	106,358,	0,272,
#Partially deleted in new
chr12	8858142	8915276	chr12:8858142-8915276	3	-	8858142	8858142	8553170	2	134,321,	0,56813,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	8867942	8887001	chr12:8867942-8887001	0	+	8867942	8875011	789624	8	115,128,91,69,103,42,93,495,	0,287,594,1192,6482,7028,12581,18564,
#Partially deleted in new
chr12	8913895	8922691	chr12:8913895-8922691	0	+	8917677	8922691	789624	6	55,162,111,81,150,59,	0,3734,5860,7089,7705,8737,
#Partially deleted in new
chr12	8914552	8940404	chr12:8914552-8940404	3	+	8917677	8939459	0	16	275,9,162,111,81,150,156,493,788,148,212,115,109,151,232,1100,	0,1508,3077,5203,6432,7048,8080,15882,18010,19312,19714,20571,22303,22623,23276,24752,
#Partially deleted in new
chr12	8914695	8933973	chr12:8914695-8933973	0	+	8914695	8914695	8553170	10	132,162,111,81,150,156,493,501,96,109,	0,2934,5060,6289,6905,7937,15739,17867,18559,19169,
#Partially deleted in new
chr12	8914730	8941467	chr12:8914730-8941467	1	+	8917677	8939459	789624	14	97,162,81,150,132,493,788,148,212,115,109,151,232,2163,	0,2899,6254,6870,7926,15704,17832,19134,19536,20393,22125,22445,23098,24574,
#Partially deleted in new
chr12	8914740	8939935	chr12:8914740-8939935	1	+	8917677	8939459	0	15	87,162,111,81,150,156,493,788,148,212,115,109,151,232,631,	0,2889,5015,6244,6860,7892,15694,17822,19124,19526,20383,22115,22435,23088,24564,
#Partially deleted in new
chr12	8914772	8922720	chr12:8914772-8922720	0	+	8917677	8922720	789624	6	55,162,111,81,150,82,	0,2857,4983,6212,6828,7866,
#Partially deleted in new
chr12	8914781	8930544	chr12:8914781-8930544	0	+	8917677	8930544	789624	6	46,162,111,81,132,110,	0,2848,4974,6203,7875,15653,
#Partially deleted in new
chr12	8915759	8941467	chr12:8915759-8941467	0	+	8917677	8930453	789624	18	310,162,111,81,150,24,56,493,269,148,212,115,109,151,232,260,94,892,	0,1870,3996,5225,5841,6873,6973,14675,16803,18105,18507,19364,21096,21416,22069,23545,23969,24816,
#Partially deleted in new
chr12	8917654	8921717	chr12:8917654-8921717	0	+	8917677	8921717	789624	4	137,162,81,117,	0,2101,3330,3946,
#Partially deleted in new
chr12	8922743	8940070	chr12:8922743-8940070	0	+	8922743	8939887	789624	3	45,238,200,	0,7691,17127,
#Partially deleted in new
chr12	8930611	8933980	chr12:8930611-8933980	0	+	8930611	8930611	8553170	4	316,251,44,116,	0,1951,2695,3253,
#Partially deleted in new
chr12	8930915	8934000	chr12:8930915-8934000	0	+	8930915	8934000	789624	4	12,269,144,136,	0,1647,2291,2949,
#Partially deleted in new
chr12	8933321	8937249	chr12:8933321-8937249	0	+	8933321	8936861	789624	5	29,148,212,109,74,	0,543,945,3534,3854,
#Deleted in new
chr12	8933536	8935228	chr12:8933536-8935228	0	+	8933536	8933536	8553170	3	476,212,105,	0,730,1587,
#Partially deleted in new
chr12	8940362	8943420	chr12:8940362-8943420	0	-	8940722	8943420	789624	3	507,127,16,	0,2053,3042,
#Partially deleted in new
chr12	8940362	8949636	chr12:8940362-8949636	0	-	8942483	8946404	789624	5	1578,127,167,177,149,	0,2053,5055,5866,9125,
#Partially deleted in new
chr12	8940363	8949761	chr12:8940363-8949761	1	-	8941817	8946404	789624	5	1577,110,167,177,274,	0,3437,5054,5865,9124,
#Partially deleted in new
chr12	8940364	8949955	chr12:8940364-8949955	3	-	8941817	8946404	0	7	1576,127,131,110,167,177,468,	0,2051,3040,3436,5053,5864,9123,
#Deleted in new
chr12	8940750	8942517	chr12:8940750-8942517	0	-	8940750	8942517	789624	2	153,102,	0,1665,
#Partially deleted in new
chr12	8941648	8946368	chr12:8941648-8946368	0	-	8941817	8946368	789624	4	292,127,131,66,	0,767,1756,4654,
#Partially deleted in new
chr12	8942178	8943886	chr12:8942178-8943886	0	-	8942391	8943886	789624	3	364,131,86,	0,1226,1622,
#Partially deleted in new
chr12	8942450	8946240	chr12:8942450-8946240	0	-	8943560	8946240	789624	5	92,180,110,167,12,	0,954,1350,2967,3778,
#Partially deleted in new
chr12	8943295	8945479	chr12:8943295-8945479	0	-	8943295	8943295	8553170	3	240,110,62,	0,505,2122,
#Partially deleted in new
chr12	8943824	8949735	chr12:8943824-8949735	0	-	8943824	8943899	789624	4	86,167,159,248,	0,1593,2404,5663,
#Deleted in new
chr12	8945236	8949610	chr12:8945236-8949610	0	-	8945236	8945236	8553170	3	348,177,123,	0,992,4251,
#Deleted in new
chr12	8945432	8949645	chr12:8945432-8949645	0	-	8945432	8946404	789624	4	152,177,109,158,	0,796,1283,4055,
#Deleted in new
chr12	8945484	8946848	chr12:8945484-8946848	0	-	8945484	8946404	789624	2	100,620,	0,744,
#Partially deleted in new
chr12	8950043	9009448	chr12:8950043-9009448	0	+	8995168	9009448	789624	5	193,105,170,101,23,	0,42162,45075,58931,59382,
#Partially deleted in new
chr12	8950106	9009516	chr12:8950106-9009516	0	+	8950106	8950106	8553170	4	130,105,101,91,	0,42099,58868,59319,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	8950124	9010063	chr12:8950124-9010063	0	+	8950124	8950124	8553170	3	112,101,638,	0,58850,59301,
#Partially deleted in new
chr12	8970428	8992292	chr12:8970428-8992292	0	+	8970428	8970428	8553170	4	98,149,134,87,	0,649,19783,21777,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	8987174	8996566	chr12:8987174-8996566	3	-	8987174	8987174	8553170	3	307,119,70,	0,1137,9322,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	8989540	9010078	chr12:8989540-9010078	3	+	8989635	9009537	0	5	177,105,170,101,653,	0,2665,5578,19434,19885,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	8989620	9010760	chr12:8989620-9010760	1	+	8989635	9010028	0	6	97,105,170,101,100,762,	0,2585,5498,19354,19805,20378,
#Partially deleted in new
chr12	8992069	9009445	chr12:8992069-9009445	0	+	8995168	9009445	789624	4	241,170,101,20,	0,3049,16905,17356,
#Partially deleted in new
chr12	9027531	9029089	chr12:9027531-9029089	7	-	9027531	9027531	16724991	2	604,346,	0,1212,
#Deleted in new
chr12	9036343	9037244	chr12:9036343-9037244	7	+	9036343	9036343	16724991	1	901,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	9055585	9065070	chr12:9055585-9065070	3	-	9055585	9055585	5263520	3	153,1257,803,	0,2034,8682,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	9065176	9068060	chr12:9065176-9068060	3	+	9065176	9065176	789624	3	52,235,1905,	0,649,979,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	9065201	9068684	chr12:9065201-9068684	0	+	9065201	9065201	8553170	3	27,235,1136,	0,624,2347,
#Partially deleted in new
chr12	9067663	9091412	chr12:9067663-9091412	0	-	9067663	9067663	8553170	4	149,112,127,212,	0,22248,22692,23537,
#Partially deleted in new
chr12	9067711	9116157	chr12:9067711-9116157	3	-	9067822	9115849	0	36	128,42,103,69,91,128,219,224,181,75,157,88,177,84,52,122,127,229,115,112,162,150,143,64,228,162,110,115,121,85,169,21,53,160,184,394,	0,471,1028,2033,2776,4647,4941,6848,9044,9634,9989,11532,11927,12382,21488,22190,22644,23489,25753,27261,27827,30895,31669,33432,33735,36527,38524,38779,39812,41609,42155,42602,44447,44665,45648,48052,
#Deleted in new
chr12	9067711	9068955	chr12:9067711-9068955	0	-	9067711	9067711	8553170	2	513,216,	0,1028,
#Deleted in new
chr12	9067711	9069078	chr12:9067711-9069078	0	-	9067711	9067711	8553170	3	128,42,339,	0,471,1028,
#Partially deleted in new
chr12	9072432	9106296	chr12:9072432-9106296	0	-	9072432	9072432	8553170	5	54,69,125,162,61,	0,220,29117,31806,33803,
#Partially deleted in new
chr12	9077768	9080398	chr12:9077768-9080398	0	-	9077768	9077768	8553170	5	89,88,177,84,125,	0,1475,1870,2325,2505,
#Partially deleted in new
chr12	9079980	9090530	chr12:9079980-9090530	0	-	9079980	9079980	8553170	4	197,52,122,175,	0,9219,9921,10375,
#Partially deleted in new
chr12	9091395	9101494	chr12:9091395-9101494	0	-	9095648	9101494	789624	7	34,115,112,162,58,64,48,	0,2069,3577,4143,8070,9748,10051,
#Partially deleted in new
chr12	9098381	9101556	chr12:9098381-9101556	0	-	9098381	9098381	8553170	4	375,143,64,110,	0,999,2762,3065,
#Deleted in new
chr12	9109339	9115860	chr12:9109339-9115860	0	-	9112208	9115849	789624	6	66,169,21,53,184,97,	0,527,974,2819,4020,6424,
#Deleted in new
chr12	9110313	9116229	chr12:9110313-9116229	0	-	9110313	9115849	789624	6	21,53,160,184,103,102,	0,1845,2063,3046,5450,5814,
#Deleted in new
chr12	9112638	9116061	chr12:9112638-9116061	0	-	9112638	9112638	8553170	3	51,184,298,	0,721,3125,
#Deleted in new
chr12	9115157	9116017	chr12:9115157-9116017	0	-	9115157	9115157	8553170	2	279,254,	0,606,
#Deleted in new
chr12	9127782	9128645	chr12:9127782-9128645	7	+	9127782	9127782	16724991	1	863,	0,
#Partially deleted in new
chr12	9135083	9135591	chr12:9135083-9135591	7	+	9135083	9135083	16724991	1	508,	0,
#Partially deleted in new
chr12	9148839	9208370	chr12:9148839-9208370	3	-	9148971	9208341	789624	36	155,42,103,69,91,128,219,224,181,75,157,88,177,84,52,122,127,229,151,106,162,150,143,64,228,162,110,115,112,85,169,21,53,160,184,112,	0,721,1804,2764,3380,3984,4285,5776,8335,8927,9580,11098,11474,12193,13757,14828,15293,16299,17212,20029,20590,32143,33135,43353,43672,45237,47490,47731,48172,51524,52052,52487,53479,53685,54928,59419,
#Partially deleted in new
chr12	9148931	9208365	chr12:9148931-9208365	0	-	9202516	9208341	789624	33	63,42,103,69,91,128,219,224,181,75,157,88,177,84,52,229,151,106,162,150,143,64,228,162,110,115,112,85,169,21,366,184,107,	0,629,1712,2672,3288,3892,4193,5684,8243,8835,9488,11006,11382,12101,13665,16207,17120,19937,20498,32051,33043,43261,43580,45145,47398,47639,48080,51432,51960,52395,53387,54836,59327,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	9155880	9156372	chr12:9155880-9156372	7	-	9155880	9155880	16724991	1	492,	0,
#Partially deleted in new
chr12	9160432	9167497	chr12:9160432-9167497	0	-	9160432	9160432	8553170	9	58,84,164,52,122,127,229,151,517,	0,600,1848,2164,3235,3700,4706,5619,6548,
#Partially deleted in new
chr12	9161032	9170097	chr12:9161032-9170097	0	-	9161032	9161032	8553170	6	84,229,151,106,162,316,	0,4106,5019,7836,8397,8749,
#Deleted in new
chr12	9163716	9167533	chr12:9163716-9167533	0	-	9163716	9163716	8553170	4	73,229,148,33,	0,1422,2335,3784,
#Deleted in new
chr12	9163747	9167531	chr12:9163747-9167531	0	-	9163747	9163747	8553170	5	42,127,229,151,31,	0,385,1391,2304,3753,
#Deleted in new
chr12	9168455	9170118	chr12:9168455-9170118	0	-	9168455	9168455	8553170	3	519,162,70,	0,974,1593,
#Partially deleted in new
chr12	9228532	9234207	chr12:9228532-9234207	5	-	9228532	9228532	16724991	9	166,42,103,69,91,131,219,307,73,	0,839,1720,2477,3073,3522,3829,4853,5602,
#Partially deleted in new
chr12	9229375	9275817	chr12:9229375-9275817	7	-	9229375	9229375	16724991	32	38,103,69,91,131,219,224,178,73,157,86,177,84,52,122,127,228,55,52,165,150,150,231,159,110,115,124,85,169,72,154,180,	0,877,1634,2230,2679,2986,4093,4759,5227,5716,6513,6889,7598,11287,11556,11878,12508,13247,16173,18172,24229,27268,33151,34330,36265,38623,40994,42193,43673,44844,45062,46262,
#Deleted in new
chr12	9239466	9239551	chr12:9239466-9239551	3	-	9239466	9239466	5263520	1	85,	0,
#Deleted in new
chr12	9239985	9240331	chr12:9239985-9240331	7	-	9239985	9239985	16724991	1	346,	0,
#Deleted in new
chr12	9240002	9243052	chr12:9240002-9243052	1	+	9240002	9240002	789624	2	537,1935,	0,1115,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	9240405	9261050	chr12:9240405-9261050	3	+	9240405	9240405	8553170	9	134,116,93,80,97,134,85,107,437,	0,938,1464,6063,7175,15153,17520,17803,20208,
#Partially deleted in new
chr12	9246496	9257960	chr12:9246496-9257960	3	+	9246496	9246496	8553170	3	52,134,38,	0,9062,11426,
#Partially deleted in new
chr12	9247655	9259557	chr12:9247655-9259557	4	-	9247655	9247655	16724991	4	57,150,143,190,	0,5949,8988,11712,
#Partially deleted in new
chr12	9253584	9268113	chr12:9253584-9268113	4	-	9253584	9253584	16724991	7	170,143,64,228,159,110,115,	0,3059,7661,8945,10121,12056,14414,
#Partially deleted in new
chr12	9277234	9313241	chr12:9277234-9313241	7	+	9277234	9277234	16724991	29	57,126,148,249,87,158,46,108,88,209,153,47,80,45,68,39,109,132,113,90,103,150,69,101,129,83,79,155,137,	0,6414,10967,16427,17197,17582,20546,21186,21545,22025,23859,24993,25388,26740,26905,28484,28780,29002,29967,32713,33104,33906,34315,34496,34714,35006,35382,35640,35870,
#Deleted in new
chr12	9286672	9286822	chr12:9286672-9286822	3	-	9286672	9286672	8553170	1	150,	0,
#Deleted in new
chr12	9314401	9316173	chr12:9314401-9316173	7	-	9314401	9314401	16724991	5	112,72,132,117,153,	0,264,930,1260,1619,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	9367463	9397617	chr12:9367463-9397617	3	+	9367463	9367463	789624	4	2133,229,127,1899,	0,8394,27067,28255,
#Partially deleted in new
chr12	9398354	9414851	chr12:9398354-9414851	7	-	9398354	9398354	16724991	4	130,91,130,49,	0,1881,4072,16448,
#Deleted in new
chr12	9415640	9416718	chr12:9415640-9416718	7	+	9415640	9415640	16724991	4	94,118,137,133,	0,375,696,945,
#Partially deleted in new
chr12	9418672	9448229	chr12:9418672-9448229	7	-	9418672	9418672	16724991	27	221,79,85,101,67,150,104,73,57,113,132,109,39,68,45,80,47,153,209,88,108,114,165,87,249,78,126,	0,439,816,1308,1516,1842,2715,3145,3892,5855,6798,7043,7409,8960,9148,10459,10887,11915,13693,14296,14635,15353,18267,18730,19338,24862,29431,
#Partially deleted in new
chr12	9445057	9445205	chr12:9445057-9445205	3	+	9445057	9445057	8553170	1	148,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	9448497	9658392	chr12:9448497-9658392	3	+	9448497	9448497	8553170	10	381,111,59,104,132,105,170,126,107,1472,	0,12826,135608,157855,159173,184927,186029,205185,207375,208423,
#Partially deleted in new
chr12	9480607	9575695	chr12:9480607-9575695	7	+	9480607	9480607	16724991	45	105,21,169,85,118,115,110,159,231,61,146,150,171,97,169,85,118,121,110,159,228,55,146,150,171,145,106,229,130,119,52,84,174,82,151,75,166,212,43,160,113,91,69,103,53,	0,10245,10840,11684,17101,20093,22424,31076,32148,36451,37065,37554,38420,39527,50983,51966,55592,59751,60626,61077,61927,63630,64488,64990,70845,71831,73369,73913,74387,76091,76921,77761,78567,79502,80215,82337,83552,84484,85700,90125,90853,92395,92858,94239,95035,
#Deleted in new
chr12	9506346	9508440	chr12:9506346-9508440	7	-	9506346	9506346	16724991	2	583,1459,	0,635,
#Partially deleted in new
chr12	9512755	9542687	chr12:9512755-9542687	4	+	9512755	9512755	16724991	14	231,75,61,146,150,171,97,169,85,118,121,110,159,153,	0,804,4303,4917,5406,6272,7379,18835,19818,23444,27603,28478,28929,29779,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	9557313	9576275	chr12:9557313-9576275	5	+	9557313	9557313	16724991	12	267,84,174,82,3509,212,1713,127,113,91,69,1429,	0,1055,1861,2796,3503,7778,10176,13452,14147,15689,16152,17533,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	9563963	9633828	chr12:9563963-9633828	0	+	9563963	9563963	8553170	13	1340,78,145,130,113,91,69,59,104,132,108,118,404,	0,3526,5094,6799,7497,9039,9502,20142,42389,43707,53280,58355,69461,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	9594550	9607886	chr12:9594550-9607886	3	-	9595273	9607839	0	6	871,116,155,75,99,132,	0,3495,3948,5216,6950,13204,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	9617283	9657441	chr12:9617283-9657441	0	+	9617283	9617283	789624	5	68,126,107,82,521,	0,36399,38589,39284,39637,
#Deleted in new
chr12	9624121	9624228	chr12:9624121-9624228	3	-	9624121	9624121	8553170	1	107,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	9634591	9657302	chr12:9634591-9657302	0	+	9634591	9634591	8553170	5	105,126,107,82,382,	0,19091,21281,21976,22329,
#Deleted in new
chr12	9641722	9643011	chr12:9641722-9643011	7	+	9641722	9641722	16724991	1	1289,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	9642871	9657070	chr12:9642871-9657070	3	+	9642871	9642871	789624	4	232,126,107,150,	0,10811,13001,14049,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	9648046	9658412	chr12:9648046-9658412	7	+	9648046	9648046	16724991	4	887,126,107,1492,	0,5636,7826,8874,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	9648101	9657087	chr12:9648101-9657087	4	+	9648101	9648101	16724991	5	275,126,107,130,167,	0,5581,7771,8466,8819,
#Partially deleted in new
chr12	9648166	9656982	chr12:9648166-9656982	4	+	9648166	9648166	16724991	5	162,126,107,130,62,	0,5516,7706,8401,8754,
#Deleted in new
chr12	9653682	9657043	chr12:9653682-9657043	5	+	9653682	9653682	16724991	4	126,83,107,123,	0,1538,2190,3238,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	9658566	9662085	chr12:9658566-9662085	3	+	9658566	9658566	8553170	2	63,2445,	0,1074,
#Partially deleted in new
chr12	9668636	9681050	chr12:9668636-9681050	0	+	9668636	9668636	8553170	2	159,128,	0,12286,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	9669712	9695129	chr12:9669712-9695129	1	+	9669734	9694801	0	6	83,111,185,104,82,370,	0,11210,18189,23115,23321,25047,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	9669712	9699555	chr12:9669712-9699555	3	+	9669734	9694874	0	5	83,111,185,104,4796,	0,11210,18189,23115,25047,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	9669712	9695138	chr12:9669712-9695138	0	+	9669734	9688098	789624	7	83,111,260,104,82,533,379,	0,11210,18189,23115,23321,23703,25047,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	9669716	9695817	chr12:9669716-9695817	0	+	9669734	9688098	789624	4	79,111,260,1058,	0,11206,18185,25043,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	9669727	9695129	chr12:9669727-9695129	0	+	9669734	9692935	0	5	68,111,185,1121,370,	0,11195,18174,23100,25032,
#Partially deleted in new
chr12	9669734	9694874	chr12:9669734-9694874	1	+	9669734	9694874	0	4	61,185,104,115,	0,18167,23093,25025,
#Partially deleted in new
chr12	9669734	9694801	chr12:9669734-9694801	1	+	9669734	9694801	0	4	61,111,185,42,	0,11188,18167,25025,
#Partially deleted in new
chr12	9669734	9694801	chr12:9669734-9694801	1	+	9669734	9694801	0	3	61,185,42,	0,18167,25025,
#Partially deleted in new
chr12	9669752	9693479	chr12:9669752-9693479	0	+	9669752	9693124	789624	4	43,185,104,446,	0,18149,23075,23281,
#Partially deleted in new
chr12	9674007	9693336	chr12:9674007-9693336	0	+	9680987	9688098	789624	5	203,111,260,104,303,	0,6915,13894,18820,19026,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	9680924	9695129	chr12:9680924-9695129	0	+	9680924	9694801	789624	5	109,185,104,82,370,	0,6977,11903,12109,13835,
#Partially deleted in new
chr12	9680939	9694869	chr12:9680939-9694869	0	+	9680939	9694801	789624	3	94,185,110,	0,6962,13820,
#Partially deleted in new
chr12	9695383	9696227	chr12:9695383-9696227	7	+	9695383	9695383	16724991	1	844,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	9715859	9722661	chr12:9715859-9722661	0	-	9718684	9722661	789624	3	917,134,18,	0,2781,6784,
#Partially deleted in new
chr12	9716560	9733119	chr12:9716560-9733119	0	-	9716758	9733119	789624	3	216,170,171,	0,6083,16388,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	9718684	9733299	chr12:9718684-9733299	1	-	9718684	9733264	789624	3	90,170,351,	0,3959,14264,
#Partially deleted in new
chr12	9722494	9733299	chr12:9722494-9733299	3	-	9722625	9733264	789624	2	319,351,	0,10454,
#Partially deleted in new
chr12	9752485	9760901	chr12:9752485-9760901	3	-	9753480	9760820	0	5	1104,104,200,123,145,	0,2101,2576,3811,8271,
#Partially deleted in new
chr12	9754138	9760901	chr12:9754138-9760901	1	-	9754582	9760820	789624	4	552,200,123,145,	0,923,2158,6618,
#Partially deleted in new
chr12	9754567	9760901	chr12:9754567-9760901	0	-	9754567	9754567	8553170	3	694,123,145,	0,1729,6189,
#Partially deleted in new
chr12	9755959	9760901	chr12:9755959-9760901	0	-	9755959	9755959	8553170	2	460,145,	0,4797,
#Partially deleted in new
chr12	9817349	9818025	chr12:9817349-9818025	7	-	9817349	9817349	16724991	2	145,250,	0,426,
#Partially deleted in new
chr12	9827480	9845007	chr12:9827480-9845007	1	+	9827544	9844526	789624	5	149,99,140,113,590,	0,4835,14331,14840,16937,
#Partially deleted in new
chr12	9827480	9845007	chr12:9827480-9845007	1	+	9827544	9844428	789624	3	149,99,590,	0,4835,16937,
#Partially deleted in new
chr12	9827480	9845007	chr12:9827480-9845007	0	+	9827544	9842373	789624	4	149,99,113,590,	0,4835,14840,16937,
#Partially deleted in new
chr12	9827480	9845002	chr12:9827480-9845002	1	+	9827544	9842373	789624	5	149,99,150,113,585,	0,4835,5822,14840,16937,
#Partially deleted in new
chr12	9827480	9845007	chr12:9827480-9845007	3	+	9827544	9844526	789624	6	149,99,150,140,113,590,	0,4835,5822,14331,14840,16937,
#Partially deleted in new
chr12	9827520	9844657	chr12:9827520-9844657	1	+	9827544	9844428	789624	4	109,99,150,240,	0,4795,5782,16897,
#Partially deleted in new
chr12	9827520	9844657	chr12:9827520-9844657	0	+	9827544	9842342	789624	5	109,99,150,132,240,	0,4795,5782,14781,16897,
#Partially deleted in new
chr12	9841813	9844992	chr12:9841813-9844992	0	+	9841813	9841813	8553170	3	138,132,575,	0,488,2604,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	9852983	9870136	chr12:9852983-9870136	3	-	9853299	9862571	789624	5	425,104,164,75,932,	0,1397,4490,9515,16221,
#Partially deleted in new
chr12	9853132	9854849	chr12:9853132-9854849	1	-	9853299	9854514	789624	2	276,469,	0,1248,
#Partially deleted in new
chr12	9856900	9869386	chr12:9856900-9869386	0	-	9856900	9856900	8553170	3	737,75,182,	0,5598,12304,
#Partially deleted in new
chr12	9856927	9869354	chr12:9856927-9869354	0	-	9856927	9856927	8553170	2	710,150,	0,12277,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	9867026	9869808	chr12:9867026-9869808	3	+	9867026	9867026	8553170	2	240,479,	0,2303,
#Partially deleted in new
chr12	9881488	9895833	chr12:9881488-9895833	3	+	9881595	9895833	0	6	177,99,48,149,113,145,	0,3445,7244,11531,11940,14200,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	9898672	9932347	chr12:9898672-9932347	1	-	9898903	9932329	0	5	304,104,167,84,73,	0,18027,23393,27587,33602,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	9913226	9932381	chr12:9913226-9932381	3	-	9913565	9932329	0	5	454,104,167,84,107,	0,3473,8839,13033,19048,
#Partially deleted in new
chr12	9936578	9943495	chr12:9936578-9943495	3	-	9936578	9936578	789624	5	236,108,185,84,366,	0,2484,3330,5910,6551,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	9948136	9953336	chr12:9948136-9953336	3	-	9948136	9948136	789624	3	1991,1178,787,	0,2765,4413,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	9951315	9985595	chr12:9951315-9985595	1	+	9951346	9985026	789624	7	41,111,99,189,152,110,726,	0,20261,27650,28020,29266,30704,33554,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	9971414	9985595	chr12:9971414-9985595	3	+	9971596	9985026	789624	6	273,99,189,152,110,726,	0,7551,7921,9167,10605,13455,
#Partially deleted in new
chr12	9971414	9980697	chr12:9971414-9980697	0	+	9971596	9980697	789624	5	55,111,99,189,116,	0,162,7551,7921,9167,
#Partially deleted in new
chr12	9971434	9984241	chr12:9971434-9984241	1	+	9971596	9983530	789624	6	253,99,189,152,110,712,	0,7531,7901,9147,10585,12095,
#Partially deleted in new
chr12	9971504	9995694	chr12:9971504-9995694	0	+	9971504	9971504	8553170	5	183,559,152,110,677,	0,7461,9077,10515,23513,
#Partially deleted in new
chr12	9971596	9985026	chr12:9971596-9985026	1	+	9971596	9985026	789624	5	91,189,152,110,157,	0,7739,8985,10423,13273,
#Partially deleted in new
chr12	9971596	9985026	chr12:9971596-9985026	0	+	9971596	9971596	8553170	5	91,559,152,110,157,	0,7369,8985,10423,13273,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	9990949	10013424	chr12:9990949-10013424	1	-	9993142	9999100	0	7	2338,107,155,120,264,46,24,	0,4190,5896,6210,8087,19842,22451,
#Deleted in new
chr12	9993060	9999280	chr12:9993060-9999280	3	-	9993142	9999100	0	6	227,107,155,120,99,244,	0,2079,3785,4099,5221,5976,
#Deleted in new
chr12	9993064	9999300	chr12:9993064-9999300	1	-	9993142	9999100	0	5	223,107,155,120,264,	0,2075,3781,4095,5972,
#Partially deleted in new
chr12	10010626	10018563	chr12:10010626-10018563	0	+	10010759	10015746	789624	6	224,99,219,155,263,233,	0,2158,3896,4625,4985,7704,
#Partially deleted in new
chr12	10010631	10018619	chr12:10010631-10018619	3	+	10010759	10018481	789624	6	219,99,219,155,116,289,	0,2153,3891,4620,4980,7699,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	10010631	10017948	chr12:10010631-10017948	1	+	10010759	10015746	789624	5	219,99,219,155,2337,	0,2153,3891,4620,4980,
#Partially deleted in new
chr12	10010758	10013223	chr12:10010758-10013223	0	+	10010758	10010758	8553170	2	92,439,	0,2026,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	10010758	10017952	chr12:10010758-10017952	0	+	10010759	10014538	789624	5	92,99,211,155,2341,	0,2026,3772,4493,4853,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	10015239	10030606	chr12:10015239-10030606	3	-	10015239	10015239	789624	3	534,184,64,	0,12675,15303,
#Partially deleted in new
chr12	10030676	10066027	chr12:10030676-10066027	3	+	10052687	10065632	0	9	296,155,104,149,81,147,152,122,528,	0,10789,21314,21953,23594,30450,32378,34055,34823,
#Partially deleted in new
chr12	10030677	10052835	chr12:10030677-10052835	0	+	10030677	10030677	8553170	3	295,155,845,	0,10788,21313,
#Partially deleted in new
chr12	10040847	10045711	chr12:10040847-10045711	7	+	10040847	10040847	16724991	4	121,155,106,227,	0,618,2367,4637,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	10060598	10063182	chr12:10060598-10063182	0	+	10060598	10060598	8553170	2	675,128,	0,2456,
#Partially deleted in new
chr12	10069553	10098985	chr12:10069553-10098985	3	-	10071332	10098922	789624	6	1960,119,152,177,99,178,	0,3739,5950,11683,19570,29254,
#Partially deleted in new
chr12	10070482	10099014	chr12:10070482-10099014	1	-	10071332	10098922	789624	5	1031,119,152,177,207,	0,2810,5021,10754,28325,
#Partially deleted in new
chr12	10070762	10098950	chr12:10070762-10098950	1	-	10071332	10098922	789624	4	751,119,152,143,	0,2530,4741,28045,
#Partially deleted in new
chr12	10081268	10099028	chr12:10081268-10099028	0	-	10092433	10098922	789624	4	145,99,98,221,	0,7855,11153,17539,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	10084185	10084490	chr12:10084185-10084490	3	+	10084185	10084185	8553170	1	305,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	10089126	10111627	chr12:10089126-10111627	0	-	10089126	10098922	789624	3	96,123,343,	0,9681,22158,
#Partially deleted in new
chr12	10111737	10112471	chr12:10111737-10112471	7	+	10111737	10111737	16724991	1	734,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	10116776	10130241	chr12:10116776-10130241	3	-	10118457	10130082	789624	5	1814,119,152,99,262,	0,6468,8520,10970,13203,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	10116776	10130258	chr12:10116776-10130258	0	-	10118457	10130082	789624	8	473,437,119,152,138,99,118,56,	0,1377,6468,8520,9794,10970,13203,13426,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	10116776	10130257	chr12:10116776-10130257	0	-	10116776	10116776	789624	6	1814,119,87,152,1275,278,	0,6468,8310,8520,9794,13203,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	10117861	10130153	chr12:10117861-10130153	1	-	10118512	10130082	789624	4	729,152,99,174,	0,7435,9885,12118,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	10118067	10130185	chr12:10118067-10130185	1	-	10118457	10130082	789624	4	523,119,152,206,	0,5177,7229,11912,
#Partially deleted in new
chr12	10118226	10130237	chr12:10118226-10130237	1	-	10118457	10130082	789624	6	364,119,152,138,99,258,	0,5018,7070,8344,9520,11753,
#Partially deleted in new
chr12	10118457	10130082	chr12:10118457-10130082	0	-	10123328	10130082	789624	3	133,119,103,	0,4787,11522,
#Partially deleted in new
chr12	10118457	10130082	chr12:10118457-10130082	1	-	10118512	10130082	789624	5	133,152,138,99,103,	0,6839,8113,9289,11522,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	10124745	10130183	chr12:10124745-10130183	0	-	10124745	10124745	8553170	3	703,99,204,	0,3001,5234,
#Partially deleted in new
chr12	10127326	10130189	chr12:10127326-10130189	1	-	10127410	10130082	789624	3	116,99,210,	0,420,2653,
#Partially deleted in new
chr12	10127445	10130257	chr12:10127445-10130257	1	-	10127537	10130082	789624	3	400,118,55,	0,2534,2757,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	10158300	10172138	chr12:10158300-10172138	3	-	10159879	10172077	0	6	1721,116,140,246,102,137,	0,2046,2485,8411,10773,13701,
#Partially deleted in new
chr12	10159514	10172138	chr12:10159514-10172138	1	-	10159879	10172077	789624	4	439,246,102,137,	0,7197,9559,12487,
#Partially deleted in new
chr12	10159583	10167599	chr12:10159583-10167599	1	-	10160015	10166823	789624	4	438,116,246,22,	0,763,7128,7994,
#Partially deleted in new
chr12	10159617	10172117	chr12:10159617-10172117	1	-	10160015	10172077	0	5	404,140,246,102,116,	0,1168,7094,9456,12384,
#Partially deleted in new
chr12	10159666	10172132	chr12:10159666-10172132	1	-	10160015	10172077	0	5	355,116,246,102,131,	0,680,7045,9407,12335,
#Deleted in new
chr12	10159667	10160561	chr12:10159667-10160561	0	-	10159667	10159667	8553170	2	354,215,	0,679,
#Partially deleted in new
chr12	10159900	10169182	chr12:10159900-10169182	0	-	10159900	10169092	789624	5	121,116,140,246,109,	0,446,885,6811,9173,
#Partially deleted in new
chr12	10160346	10167663	chr12:10160346-10167663	0	-	10160346	10166823	789624	4	116,140,238,86,	0,439,6365,7231,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	10160401	10167599	chr12:10160401-10167599	0	-	10160401	10166823	789624	5	61,140,246,122,22,	0,384,6310,6785,7176,
#Partially deleted in new
chr12	10160866	10167168	chr12:10160866-10167168	0	-	10160866	10166823	789624	2	59,457,	0,5845,
#Partially deleted in new
chr12	10160877	10170387	chr12:10160877-10170387	0	-	10160877	10169092	789624	4	48,246,102,70,	0,5834,8196,9440,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	10170541	10191785	chr12:10170541-10191785	3	+	10179574	10190140	789624	6	310,148,44,39,170,1890,	0,8939,12008,14788,15878,19354,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	10170629	10172418	chr12:10170629-10172418	0	+	10170629	10170629	8553170	2	222,140,	0,1649,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	10170728	10175522	chr12:10170728-10175522	0	+	10170728	10170728	8553170	2	123,241,	0,4553,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	10179012	10191801	chr12:10179012-10191801	1	+	10179590	10190140	789624	4	616,39,170,1906,	0,6317,7407,10883,
#Partially deleted in new
chr12	10179302	10186552	chr12:10179302-10186552	0	+	10179574	10186552	789624	4	326,44,39,133,	0,3247,6027,7117,
#Partially deleted in new
chr12	10186396	10190263	chr12:10186396-10190263	0	+	10186396	10186396	8553170	2	193,368,	0,3499,
#Deleted in new
chr12	10212457	10214123	chr12:10212457-10214123	0	+	10213129	10213877	789624	4	296,275,139,50,	0,487,1378,1616,
#Partially deleted in new
chr12	10212508	10222087	chr12:10212508-10222087	0	+	10213129	10213877	789624	6	245,327,352,79,119,301,	0,384,1327,5554,7931,9278,
#Partially deleted in new
chr12	10212596	10220481	chr12:10212596-10220481	0	+	10213129	10220481	789624	4	157,275,79,42,	0,348,5466,7843,
#Partially deleted in new
chr12	10212804	10223130	chr12:10212804-10223130	3	+	10213129	10221852	0	4	415,79,119,1344,	0,5258,7635,8982,
#Partially deleted in new
chr12	10212835	10220831	chr12:10212835-10220831	1	+	10213129	10220711	0	3	384,79,392,	0,5227,7604,
#Partially deleted in new
chr12	10212853	10221950	chr12:10212853-10221950	1	+	10220540	10221852	789624	5	91,78,79,119,164,	0,288,5209,7586,8933,
#Partially deleted in new
chr12	10212876	10221908	chr12:10212876-10221908	0	+	10213129	10220460	789624	3	343,119,122,	0,7563,8910,
#Partially deleted in new
chr12	10212876	10220655	chr12:10212876-10220655	1	+	10213129	10220460	789624	2	343,216,	0,7563,
#Partially deleted in new
chr12	10212882	10220778	chr12:10212882-10220778	1	+	10213129	10220711	0	4	108,127,79,339,	0,210,5180,7557,
#Deleted in new
chr12	10212882	10213877	chr12:10212882-10213877	1	+	10213129	10213877	789624	2	337,42,	0,953,
#Partially deleted in new
chr12	10212896	10223123	chr12:10212896-10223123	0	+	10213129	10213877	789624	6	323,352,111,79,119,1337,	0,939,1772,5166,7543,8890,
#Deleted in new
chr12	10212921	10214689	chr12:10212921-10214689	0	+	10213129	10213877	789624	4	298,139,114,21,	0,914,1152,1747,
#Partially deleted in new
chr12	10212927	10221969	chr12:10212927-10221969	1	+	10213129	10221852	0	5	63,127,79,119,183,	0,165,5135,7512,8859,
#Partially deleted in new
chr12	10213105	10223128	chr12:10213105-10223128	0	+	10213129	10213441	789624	4	1674,79,119,1342,	0,4957,7334,8681,
#Partially deleted in new
chr12	10213428	10220525	chr12:10213428-10220525	0	+	10213428	10213428	8553170	4	286,114,79,86,	0,645,4634,7011,
#Partially deleted in new
chr12	10213428	10223123	chr12:10213428-10223123	1	+	10220540	10221852	789624	4	759,79,119,1337,	0,4634,7011,8358,
#Partially deleted in new
chr12	10213439	10221852	chr12:10213439-10221852	1	+	10220540	10221852	789624	6	275,139,114,79,119,66,	0,396,634,4623,7000,8347,
#Partially deleted in new
chr12	10213439	10223110	chr12:10213439-10223110	1	+	10220540	10221852	789624	4	178,79,119,1324,	0,4623,7000,8347,
#Partially deleted in new
chr12	10213628	10221799	chr12:10213628-10221799	0	+	10220540	10221799	789624	4	371,79,119,13,	0,4434,6811,8158,
#Deleted in new
chr12	10214160	10214761	chr12:10214160-10214761	3	-	10214160	10214160	8553170	2	209,120,	0,481,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	10226057	10314819	chr12:10226057-10314819	0	+	10308077	10314764	789624	6	176,107,63,152,104,147,	0,81920,83568,85406,87352,88615,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	10226065	10315009	chr12:10226065-10315009	0	+	10226065	10226065	8553170	6	168,82,1711,152,104,337,	0,78400,81912,85398,87344,88607,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	10304445	10329600	chr12:10304445-10329600	3	+	10308077	10314793	0	7	102,107,93,63,152,104,14928,	0,3532,4942,5180,7018,8964,10227,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	10307817	10317251	chr12:10307817-10317251	1	+	10308077	10314793	0	6	267,93,63,152,104,2579,	0,1570,1808,3646,5592,6855,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	10307817	10317251	chr12:10307817-10317251	1	+	10308077	10314793	0	5	267,63,152,104,2579,	0,1808,3646,5592,6855,
#Partially deleted in new
chr12	10307944	10311683	chr12:10307944-10311683	0	+	10307944	10307944	8553170	3	140,63,220,	0,1681,3519,
#Partially deleted in new
chr12	10307949	10314977	chr12:10307949-10314977	0	+	10308077	10313462	789624	5	135,93,63,107,305,	0,1438,1676,5457,6723,
#Partially deleted in new
chr12	10307949	10314977	chr12:10307949-10314977	1	+	10308077	10313465	789624	6	135,93,63,156,50,305,	0,1438,1676,3514,5514,6723,
#Partially deleted in new
chr12	10307949	10314977	chr12:10307949-10314977	1	+	10308077	10314793	789624	5	135,93,152,104,305,	0,1438,3514,5460,6723,
#Partially deleted in new
chr12	10308049	10314818	chr12:10308049-10314818	0	+	10308077	10313411	789624	6	35,93,63,156,104,146,	0,1338,1576,3414,5360,6623,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	10313493	10315637	chr12:10313493-10315637	0	+	10313493	10315347	789624	3	20,101,325,	0,1179,1819,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	10358463	10361045	chr12:10358463-10361045	3	-	10358463	10358463	8553170	2	100,462,	0,2120,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	10363768	10398506	chr12:10363768-10398506	3	+	10363768	10363768	789624	4	265,102,135,2328,	0,10266,15933,32410,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	10372352	10390018	chr12:10372352-10390018	3	-	10373113	10388810	789624	8	879,104,152,36,93,108,105,76,	0,5779,6201,7094,7347,14550,16418,17590,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	10372352	10407766	chr12:10372352-10407766	0	-	10407652	10407766	789624	10	879,104,152,36,93,108,105,85,57,131,	0,5779,6201,7094,7347,14550,16418,17590,19482,35283,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	10372415	10382182	chr12:10372415-10382182	0	-	10372415	10372415	8553170	5	816,104,152,346,369,	0,5716,6138,7031,9398,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	10372806	10390025	chr12:10372806-10390025	0	-	10372806	10372806	8553170	6	425,104,1239,108,105,83,	0,5325,5747,14096,15964,17136,
#Partially deleted in new
chr12	10372905	10409549	chr12:10372905-10409549	3	-	10407652	10409549	789624	13	326,104,152,36,93,108,105,57,58,154,54,99,161,	0,5226,5648,6541,6794,13997,15865,18929,20904,34730,35423,36006,36483,
#Partially deleted in new
chr12	10372979	10388976	chr12:10372979-10388976	1	-	10373113	10388810	789624	7	252,104,152,36,93,108,206,	0,5152,5574,6467,6720,13923,15791,
#Partially deleted in new
chr12	10372990	10410146	chr12:10372990-10410146	0	-	10407652	10408948	789624	13	241,104,152,36,93,108,105,57,58,154,54,99,48,	0,5141,5563,6456,6709,13912,15780,18844,20819,34645,35338,35921,37108,
#Partially deleted in new
chr12	10373058	10407759	chr12:10373058-10407759	0	-	10407652	10407759	789624	9	173,104,152,36,93,108,105,101,124,	0,5073,5495,6388,6641,13844,15712,32791,34577,
#Partially deleted in new
chr12	10373058	10409549	chr12:10373058-10409549	0	-	10407652	10409549	789624	11	173,104,152,36,93,108,105,154,54,99,161,	0,5073,5495,6388,6641,13844,15712,34577,35270,35853,36330,
#Partially deleted in new
chr12	10373058	10410128	chr12:10373058-10410128	0	-	10407652	10408948	789624	10	173,104,152,36,93,154,54,99,90,30,	0,5073,5495,6388,6641,34577,35270,35853,36330,37040,
#Partially deleted in new
chr12	10373081	10410128	chr12:10373081-10410128	0	-	10407652	10408948	789624	11	150,104,152,36,93,108,105,154,54,99,30,	0,5050,5472,6365,6618,13821,15689,34554,35247,35830,37017,
#Partially deleted in new
chr12	10373184	10391874	chr12:10373184-10391874	0	-	10378703	10388810	789624	8	47,104,152,93,108,105,85,40,	0,4947,5369,6515,13718,15586,16758,18650,
#Partially deleted in new
chr12	10378131	10410128	chr12:10378131-10410128	0	-	10407652	10408948	789624	11	104,152,36,93,108,105,154,54,99,90,30,	0,422,1315,1568,8771,10639,29504,30197,30780,31257,31967,
#Partially deleted in new
chr12	10378553	10410128	chr12:10378553-10410128	0	-	10407652	10408948	789624	12	152,36,93,108,105,85,57,101,154,54,99,30,	0,893,1146,8349,10217,11389,13281,27296,29082,29775,30358,31545,
#Partially deleted in new
chr12	10378574	10410128	chr12:10378574-10410128	0	-	10407652	10408948	789624	12	131,36,93,108,105,85,101,154,54,99,90,30,	0,872,1125,8328,10196,11368,27275,29061,29754,30337,30814,31524,
#Partially deleted in new
chr12	10379365	10409549	chr12:10379365-10409549	0	-	10379365	10379365	8553170	7	427,108,105,154,54,99,161,	0,7537,9405,28270,28963,29546,30023,
#Partially deleted in new
chr12	10379699	10410128	chr12:10379699-10410128	0	-	10407652	10408948	789624	11	93,108,105,85,57,58,101,154,54,99,30,	0,7203,9071,10243,12135,14110,26150,27936,28629,29212,30399,
#Partially deleted in new
chr12	10379765	10410128	chr12:10379765-10410128	0	-	10407652	10408948	789624	11	27,108,105,85,57,101,154,54,99,90,30,	0,7137,9005,10177,12069,26084,27870,28563,29146,29623,30333,
#Deleted in new
chr12	10407381	10409757	chr12:10407381-10409757	3	-	10407652	10409575	789624	4	408,54,99,369,	0,947,1530,2007,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	10412311	10420595	chr12:10412311-10420595	1	-	10412571	10420550	789624	7	305,91,101,155,45,99,232,	0,3392,4355,6032,6732,7554,8052,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	10412311	10436001	chr12:10412311-10436001	3	-	10412571	10435986	789624	7	305,91,101,155,45,99,202,	0,3392,4355,6032,22174,23000,23488,
#Partially deleted in new
chr12	10415583	10420550	chr12:10415583-10420550	3	-	10415607	10420550	789624	6	211,101,155,45,99,187,	0,1083,2760,3460,4282,4780,
#Partially deleted in new
chr12	10426853	10435905	chr12:10426853-10435905	0	-	10433807	10435905	789624	7	24,95,101,79,45,99,106,	0,4280,5252,6937,7632,8458,8946,
#Partially deleted in new
chr12	10430598	10435993	chr12:10430598-10435993	3	-	10431116	10435986	789624	6	630,101,152,45,99,194,	0,1507,3192,3887,4713,5201,
#Partially deleted in new
chr12	10430608	10435993	chr12:10430608-10435993	1	-	10431116	10435986	789624	6	620,101,152,45,99,194,	0,1497,3182,4386,4703,5191,
#Partially deleted in new
chr12	10430608	10434250	chr12:10430608-10434250	1	-	10431116	10434250	789624	4	620,101,152,10,	0,1497,3182,3632,
#Partially deleted in new
chr12	10430979	10442300	chr12:10430979-10442300	1	-	10431116	10437711	789624	7	249,101,152,45,99,51,74,	0,1126,2811,3506,4332,6722,11247,
#Partially deleted in new
chr12	10431019	10433906	chr12:10431019-10433906	0	-	10431262	10433906	789624	3	283,101,116,	0,1086,2771,
#Partially deleted in new
chr12	10442263	10454685	chr12:10442263-10454685	1	-	10442298	10451156	789624	9	37,95,101,152,54,96,218,72,354,	0,4304,5268,6973,7650,8220,8706,10934,12068,
#Partially deleted in new
chr12	10446027	10453348	chr12:10446027-10453348	1	-	10446550	10451156	0	7	635,101,152,54,96,218,151,	0,1504,3209,3886,4456,4942,7170,
#Partially deleted in new
chr12	10446027	10454616	chr12:10446027-10454616	1	-	10446550	10451156	0	7	635,101,152,96,218,72,285,	0,1504,3209,4456,4942,7170,8304,
#Partially deleted in new
chr12	10446030	10453330	chr12:10446030-10453330	1	-	10446550	10451156	0	6	632,101,152,96,218,133,	0,1501,3206,4453,4939,7167,
#Partially deleted in new
chr12	10446040	10454616	chr12:10446040-10454616	3	-	10446550	10451156	0	8	622,101,152,54,96,218,72,285,	0,1491,3196,3873,4443,4929,7157,8291,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	10447230	10449364	chr12:10447230-10449364	0	-	10447527	10449364	789624	2	402,128,	0,2006,
#Deleted in new
chr12	10449991	10451294	chr12:10449991-10451294	0	-	10449991	10449991	8553170	2	588,325,	0,978,
#Partially deleted in new
chr12	10505601	10523135	chr12:10505601-10523135	1	+	10505902	10522695	8553170	2	1609,533,	0,17001,
#Deleted in new
chr12	10505889	10507491	chr12:10505889-10507491	3	+	10505902	10507321	789624	1	1602,	0,
#Deleted in new
chr12	10551265	10551535	chr12:10551265-10551535	7	-	10551265	10551265	16724991	1	270,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	10553362	10558049	chr12:10553362-10558049	3	+	10553362	10553362	8553170	2	154,714,	0,3973,
#Partially deleted in new
chr12	10588062	10599565	chr12:10588062-10599565	7	-	10588062	10588062	16724991	7	1483,107,225,237,90,167,44,	0,4217,5718,7628,8829,9980,11459,
#Partially deleted in new
chr12	10588782	10599669	chr12:10588782-10599669	5	-	10588782	10588782	16724991	5	763,107,225,167,148,	0,3497,4998,9260,10739,
#Partially deleted in new
chr12	10589385	10598209	chr12:10589385-10598209	5	-	10589385	10589385	16724991	6	160,107,225,237,90,167,	0,2894,4395,6305,7506,8657,
#Partially deleted in new
chr12	10604189	10613623	chr12:10604189-10613623	3	-	10606274	10613532	0	5	2185,83,111,59,185,	0,3664,5641,6432,9249,
#Deleted in new
chr12	10606012	10608040	chr12:10606012-10608040	0	-	10606012	10606012	8553170	2	362,187,	0,1841,
#Partially deleted in new
chr12	10606012	10613600	chr12:10606012-10613600	0	-	10606012	10606012	8553170	4	362,2088,59,162,	0,1841,4609,7426,
#Partially deleted in new
chr12	10606012	10613591	chr12:10606012-10613591	1	-	10606274	10610636	789624	5	362,83,111,59,51,	0,1841,3818,4609,7528,
#Partially deleted in new
chr12	10606012	10613594	chr12:10606012-10613594	0	-	10609374	10613532	789624	6	362,83,286,111,59,156,	0,1841,3085,3818,4609,7426,
#Partially deleted in new
chr12	10606259	10613591	chr12:10606259-10613591	0	-	10609374	10610636	789624	6	115,83,286,111,59,51,	0,1594,2838,3571,4362,7281,
#Partially deleted in new
chr12	10606269	10613609	chr12:10606269-10613609	0	-	10612826	10613532	789624	6	105,83,111,59,339,171,	0,1584,3561,4352,6370,7169,
#Partially deleted in new
chr12	10609213	10613600	chr12:10609213-10613600	0	-	10612826	10613532	789624	5	170,111,59,339,162,	0,617,1408,3426,4225,
#Partially deleted in new
chr12	10609276	10613573	chr12:10609276-10613573	0	-	10612826	10613532	789624	5	107,111,59,164,135,	0,554,1345,3538,4162,
#Partially deleted in new
chr12	10609603	10613600	chr12:10609603-10613600	0	-	10609603	10609603	8553170	3	338,59,162,	0,1018,3835,
#Deleted in new
chr12	10612826	10613605	chr12:10612826-10613605	1	-	10612826	10613532	789624	2	152,167,	0,612,
#Partially deleted in new
chr12	10618938	10674292	chr12:10618938-10674292	3	-	10620143	10634618	789624	11	1410,97,41,209,84,182,264,135,120,126,327,	0,2937,3699,5712,8702,10554,12106,15051,15628,18132,55027,
#Partially deleted in new
chr12	10627639	10629638	chr12:10627639-10629638	0	-	10627639	10629638	789624	2	85,164,	0,1835,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	10631233	10674050	chr12:10631233-10674050	0	-	10631233	10634618	789624	5	75,135,120,167,85,	0,2756,3333,36055,42732,
#Partially deleted in new
chr12	10631246	10673658	chr12:10631246-10673658	0	-	10631246	10634618	789624	5	62,135,120,126,143,	0,2743,3320,5824,42269,
#Partially deleted in new
chr12	10633980	10674030	chr12:10633980-10674030	0	-	10633980	10634618	789624	5	144,120,126,65,65,	0,586,3090,6689,39985,
#Partially deleted in new
chr12	10634054	10674318	chr12:10634054-10674318	0	-	10634054	10634618	789624	3	70,120,353,	0,512,39911,
#Partially deleted in new
chr12	10699088	10723307	chr12:10699088-10723307	1	-	10701287	10723111	789624	9	566,100,175,98,123,90,34,64,458,	0,2165,2871,4962,14122,16605,18999,19991,23761,
#Partially deleted in new
chr12	10699212	10723312	chr12:10699212-10723312	3	-	10701287	10723111	789624	10	442,100,175,98,207,123,90,34,64,463,	0,2041,2747,4838,10695,13998,16481,18875,19867,23637,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	10699226	10722911	chr12:10699226-10722911	0	-	10699226	10699226	8553170	8	428,100,2189,3426,90,34,64,62,	0,2027,2733,10681,16467,18861,19853,23623,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	10699316	10702475	chr12:10699316-10702475	0	-	10699316	10699316	8553170	4	338,100,175,64,	0,1937,2643,3095,
#Partially deleted in new
chr12	10699426	10710120	chr12:10699426-10710120	0	-	10699426	10699426	8553170	5	228,100,175,89,213,	0,1827,2533,4633,10481,
#Partially deleted in new
chr12	10699477	10704438	chr12:10699477-10704438	0	-	10699477	10699477	8553170	4	177,100,175,388,	0,1776,2482,4573,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	10699609	10702642	chr12:10699609-10702642	0	-	10699609	10699609	8553170	4	45,100,175,384,	0,1644,2350,2649,
#Partially deleted in new
chr12	10701252	10716148	chr12:10701252-10716148	0	-	10701252	10701252	8553170	5	101,175,98,123,455,	0,707,2798,11958,14441,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	10701253	10702371	chr12:10701253-10702371	0	-	10701253	10701253	8553170	2	100,412,	0,706,
#Partially deleted in new
chr12	10701273	10718115	chr12:10701273-10718115	0	-	10701273	10701273	8553170	6	80,175,98,123,90,103,	0,686,2777,11937,14420,16739,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	10702009	10710686	chr12:10702009-10710686	0	-	10702009	10702009	8553170	4	125,98,207,153,	0,2041,7898,8524,
#Partially deleted in new
chr12	10704022	10718430	chr12:10704022-10718430	0	-	10704022	10704022	8553170	6	126,207,123,90,34,69,	0,5885,9188,11671,14065,14339,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	10710350	10718121	chr12:10710350-10718121	0	-	10710758	10718121	789624	4	438,123,90,34,	0,2860,5343,7737,
#Partially deleted in new
chr12	10713228	10722046	chr12:10713228-10722046	0	-	10713228	10713228	8553170	6	105,90,34,64,142,129,	0,2465,4859,5851,7562,8689,
#Deleted in new
chr12	10715694	10718114	chr12:10715694-10718114	0	-	10715694	10715694	8553170	3	89,65,27,	0,2018,2393,
#Deleted in new
chr12	10717807	10722909	chr12:10717807-10722909	0	-	10717807	10717807	8553170	3	314,64,60,	0,1272,5042,
#Deleted in new
chr12	10718116	10722396	chr12:10718116-10722396	0	-	10718116	10718116	8553170	4	5,64,142,337,	0,963,2674,3943,
#Partially deleted in new
chr12	10750233	10777388	chr12:10750233-10777388	3	+	10750233	10750233	789624	7	67,54,33,61,120,290,71,	0,19159,23718,24572,25631,26278,27084,
#Partially deleted in new
chr12	10769392	10777444	chr12:10769392-10777444	0	+	10769392	10769392	8553170	3	54,33,127,	0,4559,7925,
#Partially deleted in new
chr12	10769420	10777439	chr12:10769420-10777439	0	+	10769420	10769420	8553170	4	26,33,290,122,	0,4531,7091,7897,
#Deleted in new
chr12	10770304	10770605	chr12:10770304-10770605	7	+	10770304	10770304	16724991	1	301,	0,
#Deleted in new
chr12	10801531	10802627	chr12:10801531-10802627	3	-	10801613	10802570	789624	1	1096,	0,
#Deleted in new
chr12	10806050	10807293	chr12:10806050-10807293	3	-	10806050	10806980	789624	1	1243,	0,
#Deleted in new
chr12	10809093	10810168	chr12:10809093-10810168	3	-	10809136	10810075	789624	1	1075,	0,
#Partially deleted in new
chr12	10824959	10882657	chr12:10824959-10882657	0	-	10882234	10882657	789624	2	234,441,	0,57257,
#Deleted in new
chr12	10825316	10826358	chr12:10825316-10826358	3	-	10825345	10826269	789624	1	1042,	0,
#Deleted in new
chr12	10831073	10832016	chr12:10831073-10832016	7	-	10831073	10831073	16724991	1	943,	0,
#Deleted in new
chr12	10845848	10849475	chr12:10845848-10849475	3	-	10847062	10849437	789624	4	102,323,36,102,	0,1196,2523,3525,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	10845848	11171598	chr12:10845848-11171598	3	-	10882234	11047024	789624	10	102,323,36,482,36,122,67,104,169,177,	0,1196,2523,36368,37212,38305,127806,188933,201171,325573,
#Deleted in new
chr12	10845848	10848934	chr12:10845848-10848934	0	-	10845848	10845848	8553170	3	102,91,563,	0,1196,2523,
#Deleted in new
chr12	10845848	10849470	chr12:10845848-10849470	1	-	10845943	10849437	789624	4	102,91,36,97,	0,1196,2523,3525,
#Deleted in new
chr12	10845850	10849475	chr12:10845850-10849475	1	-	10847057	10849437	789624	4	100,150,36,102,	0,1194,2521,3523,
#Deleted in new
chr12	10845883	10848975	chr12:10845883-10848975	0	-	10845883	10845883	8553170	3	67,323,604,	0,1161,2488,
#Deleted in new
chr12	10846991	10849461	chr12:10846991-10849461	0	-	10846991	10846991	8553170	3	376,36,88,	0,1380,2382,
#Partially deleted in new
chr12	10847138	11171600	chr12:10847138-11171600	0	-	10847138	11047055	789624	5	229,36,67,169,179,	0,1233,126516,199881,324283,
#Deleted in new
chr12	10847205	10848559	chr12:10847205-10848559	0	-	10847205	10847205	8553170	3	162,36,38,	0,1166,1316,
#Deleted in new
chr12	10848364	10849475	chr12:10848364-10849475	0	-	10848364	10848364	8553170	2	730,102,	0,1009,
#Deleted in new
chr12	10880964	10884253	chr12:10880964-10884253	3	-	10882234	10884217	789624	4	92,482,36,100,	0,1252,2096,3189,
#Deleted in new
chr12	10881010	10884255	chr12:10881010-10884255	3	-	10882234	10884217	789624	5	46,255,164,36,102,	0,1206,1524,2050,3143,
#Partially deleted in new
chr12	10882221	11047190	chr12:10882221-11047190	1	-	10882234	10884217	789624	4	477,122,67,171,	0,1932,91433,164798,
#Partially deleted in new
chr12	10882586	11171544	chr12:10882586-11171544	0	-	10882586	10882586	8553170	5	112,36,67,169,123,	0,474,91068,164433,288835,
#Partially deleted in new
chr12	10891460	11047041	chr12:10891460-11047041	0	-	10891460	10891460	8553170	3	465,67,22,	0,82194,155559,
#Deleted in new
chr12	10894942	10895882	chr12:10894942-10895882	5	-	10894942	10894942	16724991	1	940,	0,
#Partially deleted in new
chr12	10895100	10973706	chr12:10895100-10973706	0	-	10895100	10895100	8553170	2	229,52,	0,78554,
#Partially deleted in new
chr12	10895167	10896952	chr12:10895167-10896952	7	-	10895167	10895167	16724991	2	162,135,	0,1650,
#Deleted in new
chr12	10907925	10909562	chr12:10907925-10909562	3	-	10908386	10909298	789624	1	1637,	0,
#Deleted in new
chr12	10929235	10931164	chr12:10929235-10931164	1	+	10929273	10931062	789624	3	102,36,503,	0,1033,1426,
#Deleted in new
chr12	10929235	10932341	chr12:10929235-10932341	3	+	10929273	10931062	789624	4	102,36,419,116,	0,1033,1426,2990,
#Deleted in new
chr12	10937405	10939263	chr12:10937405-10939263	3	-	10938253	10939207	789624	1	1858,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	10937407	11171573	chr12:10937407-11171573	0	-	10937407	10937407	8553170	5	1170,67,104,169,152,	0,36247,97374,109612,234014,
#Deleted in new
chr12	10964424	10965352	chr12:10964424-10965352	7	-	10964424	10964424	16724991	1	928,	0,
#Partially deleted in new
chr12	10973283	11047114	chr12:10973283-11047114	0	-	10973283	10973283	8553170	2	438,95,	0,73736,
#Deleted in new
chr12	10985912	10986912	chr12:10985912-10986912	3	-	10985960	10986860	789624	1	1000,	0,
#Deleted in new
chr12	10996494	10997875	chr12:10996494-10997875	3	-	10996945	10997875	789624	1	1381,	0,
#Partially deleted in new
chr12	11005933	11047137	chr12:11005933-11047137	0	-	11005933	11005933	8553170	2	336,118,	0,41086,
#Deleted in new
chr12	11021618	11022620	chr12:11021618-11022620	3	-	11021671	11022571	789624	1	1002,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	11030386	11031407	chr12:11030386-11031407	3	-	11030405	11031335	789624	1	1021,	0,
#Partially deleted in new
chr12	11047012	11171608	chr12:11047012-11171608	0	-	11047012	11047012	8553170	3	176,171,187,	0,73997,124409,
#Deleted in new
chr12	11048331	11049256	chr12:11048331-11049256	7	-	11048331	11048331	16724991	1	925,	0,
#Deleted in new
chr12	11061364	11062294	chr12:11061364-11062294	3	-	11061364	11062294	789624	1	930,	0,
#Deleted in new
chr12	11076768	11079171	chr12:11076768-11079171	7	-	11076768	11076768	16724991	1	2403,	0,
#Deleted in new
chr12	11077315	11078242	chr12:11077315-11078242	5	-	11077315	11077315	16724991	1	927,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	11091286	11092313	chr12:11091286-11092313	3	-	11091299	11092229	789624	1	1027,	0,
#Deleted in new
chr12	11097178	11097274	chr12:11097178-11097274	7	-	11097178	11097178	16724991	1	96,	0,
#Partially deleted in new
chr12	11120835	11171460	chr12:11120835-11171460	0	-	11120835	11120835	8553170	2	345,39,	0,50586,
#Deleted in new
chr12	11132957	11134644	chr12:11132957-11134644	3	-	11133284	11134244	789624	1	1687,	0,
#Deleted in new
chr12	11158784	11159694	chr12:11158784-11159694	7	-	11158784	11158784	16724991	1	910,	0,
#Partially deleted in new
chr12	11166089	11171353	chr12:11166089-11171353	3	-	11166089	11166089	8553170	2	298,87,	0,5177,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	11171221	11176016	chr12:11171221-11176016	3	+	11171356	11171563	789624	1	4795,	0,
#Deleted in new
chr12	11185992	11186937	chr12:11185992-11186937	3	-	11185992	11186937	789624	1	945,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	11196074	11196996	chr12:11196074-11196996	7	-	11196074	11196074	16724991	1	922,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	11212218	11251389	chr12:11212218-11251389	3	+	11212218	11212218	8553170	2	441,71,	0,39100,
#Deleted in new
chr12	11265923	11269707	chr12:11265923-11269707	1	-	11267192	11269669	789624	5	106,343,504,36,102,	0,1252,1721,2709,3682,
#Deleted in new
chr12	11265955	11269805	chr12:11265955-11269805	3	-	11267192	11269669	789624	4	74,973,36,200,	0,1220,2677,3650,
#Deleted in new
chr12	11267779	11268739	chr12:11267779-11268739	0	-	11267779	11267779	8553170	2	369,107,	0,853,
#Partially deleted in new
chr12	11307082	11310435	chr12:11307082-11310435	3	-	11308238	11310398	789624	4	117,662,36,101,	0,1138,2287,3252,
#Partially deleted in new
chr12	11307082	11310435	chr12:11307082-11310435	1	-	11308238	11310398	789624	5	117,221,234,36,101,	0,1138,1566,2287,3252,
#Partially deleted in new
chr12	11308220	11310432	chr12:11308220-11310432	1	-	11308238	11310398	789624	3	662,36,98,	0,1149,2114,
#Partially deleted in new
chr12	11308226	11310435	chr12:11308226-11310435	1	-	11308238	11310398	789624	4	215,234,36,101,	0,422,1143,2108,
#Deleted in new
chr12	11351822	11355590	chr12:11351822-11355590	0	-	11353646	11355553	789624	4	107,929,36,101,	0,1251,2696,3667,
#Deleted in new
chr12	11351822	11355591	chr12:11351822-11355591	1	-	11353106	11355553	789624	5	107,317,213,36,102,	0,1251,1967,2696,3667,
#Deleted in new
chr12	11351822	11355586	chr12:11351822-11355586	1	-	11353106	11355553	789624	5	107,257,213,36,97,	0,1251,1967,2696,3667,
#Partially deleted in new
chr12	11351822	11395566	chr12:11351822-11395566	3	-	11353106	11395529	789624	5	107,573,353,36,101,	0,1251,1827,42672,43643,
#Partially deleted in new
chr12	11391539	11395565	chr12:11391539-11395565	3	-	11392826	11395529	789624	4	109,1184,36,100,	0,1254,2955,3926,
#Partially deleted in new
chr12	11393971	11501041	chr12:11393971-11501041	0	-	11393971	11393971	8553170	3	6,36,364,	0,523,106706,
#Partially deleted in new
chr12	11395465	11395565	chr12:11395465-11395565	0	-	11395465	11395529	789624	1	100,	0,
#Partially deleted in new
chr12	11430209	11436320	chr12:11430209-11436320	0	-	11430209	11430209	8553170	4	255,81,33,18,	0,1272,4916,6093,
#Deleted in new
chr12	11481382	11481656	chr12:11481382-11481656	7	+	11481382	11481382	16724991	1	274,	0,
#Deleted in new
chr12	11500498	11501022	chr12:11500498-11501022	7	+	11500498	11500498	16724991	1	524,	0,
#Deleted in new
chr12	11507161	11507408	chr12:11507161-11507408	7	-	11507161	11507161	16724991	1	247,	0,
#Deleted in new
chr12	11512722	11514136	chr12:11512722-11514136	7	+	11512722	11512722	16724991	1	1414,	0,
#Partially deleted in new
chr12	11516424	11521686	chr12:11516424-11521686	7	-	11516424	11516424	16724991	2	105,185,	0,5077,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	11541394	11555838	chr12:11541394-11555838	3	-	11541394	11541394	8553170	2	132,56,	0,14388,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	11546478	11546540	chr12:11546478-11546540	3	+	11546478	11546478	8553170	1	62,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	11548029	11564403	chr12:11548029-11564403	3	+	11548029	11548029	789624	8	331,132,114,117,222,1962,92,703,	0,1560,4550,5536,5819,7225,11261,15671,
#Partially deleted in new
chr12	11555699	11557052	chr12:11555699-11557052	0	+	11555699	11555699	8553170	2	385,117,	0,1236,
#Partially deleted in new
chr12	11556965	11590369	chr12:11556965-11590369	0	+	11556965	11556965	8553170	3	251,92,120,	0,2325,33284,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	11649853	11895402	chr12:11649853-11895402	3	+	11650127	11891046	0	8	307,130,165,135,546,143,101,4462,	0,102596,189286,203573,219570,234591,236072,241087,
#Partially deleted in new
chr12	11649943	11826556	chr12:11649943-11826556	0	+	11649943	11649943	8553170	4	217,130,70,155,	0,102506,175700,176458,
#Partially deleted in new
chr12	11650010	11752875	chr12:11650010-11752875	0	+	11650010	11650010	8553170	3	150,157,426,	0,66576,102439,
#Partially deleted in new
chr12	11752500	11840868	chr12:11752500-11840868	0	+	11752500	11840483	789624	3	79,165,408,	0,86639,87960,
#Partially deleted in new
chr12	11885936	11891610	chr12:11885936-11891610	0	+	11885936	11891601	789624	2	90,70,	0,5604,
#Partially deleted in new
chr12	12049843	12099684	chr12:12049843-12099684	3	+	12079305	12098988	789624	7	111,52,440,174,71,267,735,	0,1952,29455,37369,40935,44820,49106,
#Partially deleted in new
chr12	12049863	12079478	chr12:12049863-12079478	0	+	12079305	12079478	789624	4	91,52,275,180,	0,1932,22361,29435,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	12049863	12055784	chr12:12049863-12055784	0	+	12049863	12049863	8553170	3	91,52,1177,	0,1932,4744,
#Partially deleted in new
chr12	12049890	12079671	chr12:12049890-12079671	0	+	12077976	12079671	789624	4	64,52,273,373,	0,1905,27815,29408,
#Partially deleted in new
chr12	12070934	12071840	chr12:12070934-12071840	0	+	12070934	12070934	8553170	2	203,345,	0,561,
#Partially deleted in new
chr12	12070938	12099695	chr12:12070938-12099695	1	+	12079305	12098988	789624	6	199,440,174,71,267,746,	0,8360,16274,19840,23725,28011,
#Partially deleted in new
chr12	12070938	12078067	chr12:12070938-12078067	0	+	12070938	12070938	8553170	2	199,362,	0,6767,
#Partially deleted in new
chr12	12071467	12099695	chr12:12071467-12099695	1	+	12079305	12094591	789624	6	188,440,174,71,420,746,	0,7831,15745,19311,23043,27482,
#Partially deleted in new
chr12	12071467	12099695	chr12:12071467-12099695	1	+	12079305	12098988	789624	6	188,440,174,71,267,746,	0,7831,15745,19311,23196,27482,
#Partially deleted in new
chr12	12079252	12087309	chr12:12079252-12087309	0	+	12079305	12087309	789624	2	486,97,	0,7960,
#Partially deleted in new
chr12	12079298	12211084	chr12:12079298-12211084	0	+	12079305	12138955	789624	7	440,174,71,33,144,199,186,	0,7914,11480,35996,59537,108006,131600,
#Partially deleted in new
chr12	12111162	12111489	chr12:12111162-12111489	7	+	12111162	12111162	16724991	1	327,	0,
#Partially deleted in new
chr12	12111951	12112036	chr12:12111951-12112036	3	+	12111951	12111951	5263520	1	85,	0,
#Partially deleted in new
chr12	12116024	12266812	chr12:12116024-12266812	3	-	12121125	12266735	0	23	5396,98,137,231,111,237,126,210,191,212,203,327,185,227,290,217,172,397,132,197,198,394,132,	0,8540,9271,10666,14758,15796,19150,22300,31341,32917,34811,42804,43755,46168,48248,49054,63785,65018,67955,70898,87178,128237,150656,
#Partially deleted in new
chr12	12116028	12244304	chr12:12116028-12244304	0	-	12121125	12244304	789624	24	3302,34,335,98,137,231,111,237,126,210,191,212,203,327,185,227,290,217,172,397,132,197,198,43,	0,4341,5057,8536,9267,10662,14754,15792,19146,22296,31337,32913,34807,42800,43751,46164,48244,49050,63781,65014,67951,70894,87174,128233,
#Partially deleted in new
chr12	12121046	12131830	chr12:12121046-12131830	0	-	12124573	12131830	789624	4	374,98,111,10,	0,3518,9736,10774,
#Partially deleted in new
chr12	12121092	12266769	chr12:12121092-12266769	1	-	12121125	12266735	789624	23	328,98,137,231,111,102,126,210,191,212,203,327,185,227,290,217,172,397,132,197,198,394,89,	0,3472,4203,5598,9690,10728,14082,17232,26273,27849,29743,37736,38687,41100,43180,43986,58717,59950,62887,65830,82110,123169,145588,
#Partially deleted in new
chr12	12125361	12135228	chr12:12125361-12135228	0	-	12125361	12125361	8553170	4	71,111,237,54,	0,5421,6459,9813,
#Deleted in new
chr12	12155261	12155772	chr12:12155261-12155772	7	+	12155261	12155261	16724991	1	511,	0,
#Partially deleted in new
chr12	12186805	12203323	chr12:12186805-12203323	0	-	12186805	12186805	8553170	2	314,121,	0,16397,
#Partially deleted in new
chr12	12187087	12267012	chr12:12187087-12267012	0	-	12187087	12203396	789624	3	32,198,332,	0,16115,79593,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	12226673	12226777	chr12:12226673-12226777	3	+	12226673	12226673	8553170	1	104,	0,
#Deleted in new
chr12	12248990	12249427	chr12:12248990-12249427	7	+	12248990	12248990	16724991	1	437,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	12289226	12289329	chr12:12289226-12289329	3	-	12289226	12289226	8553170	1	103,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	12326055	12350541	chr12:12326055-12350541	3	-	12330026	12343314	789624	4	4903,141,323,464,	0,12364,17036,24022,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	12329264	12350241	chr12:12329264-12350241	1	-	12330026	12343314	789624	5	1694,141,82,139,164,	0,9155,13827,14011,20813,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	12329712	12338674	chr12:12329712-12338674	1	-	12330026	12338540	789624	2	1246,255,	0,8707,
#Deleted in new
chr12	12338775	12339254	chr12:12338775-12339254	7	+	12338775	12338775	16724991	1	479,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	12355405	12357067	chr12:12355405-12357067	3	-	12355405	12355405	789624	2	1400,140,	0,1522,
#Partially deleted in new
chr12	12357078	12465783	chr12:12357078-12465783	1	+	12357117	12465776	789624	4	40,144,158,238,	0,4127,78549,108467,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	12357120	12469694	chr12:12357120-12469694	3	+	12357451	12465776	789624	4	389,144,158,4149,	0,4085,78507,108425,
#Partially deleted in new
chr12	12357357	12435885	chr12:12357357-12435885	0	+	12357357	12357357	8553170	3	152,144,258,	0,3848,78270,
#Partially deleted in new
chr12	12357417	12465844	chr12:12357417-12465844	1	+	12357451	12465776	789624	3	92,158,299,	0,78210,108128,
#Deleted in new
chr12	12452102	12452481	chr12:12452102-12452481	7	-	12452102	12452102	16724991	1	379,	0,
#Partially deleted in new
chr12	12474209	12562383	chr12:12474209-12562383	3	-	12476832	12521098	0	7	3806,124,160,164,139,593,267,	0,6013,12818,26309,45652,46661,87907,
#Partially deleted in new
chr12	12475896	12562383	chr12:12475896-12562383	1	-	12487122	12521098	0	6	2119,124,160,139,593,267,	0,4326,11131,43965,44974,86220,
#Partially deleted in new
chr12	12477885	12506187	chr12:12477885-12506187	0	-	12477885	12477885	8553170	4	130,160,164,100,	0,9142,22633,28202,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	12485352	12491581	chr12:12485352-12491581	3	+	12485352	12485352	8553170	2	66,346,	0,5883,
#Partially deleted in new
chr12	12521023	12561125	chr12:12521023-12561125	0	-	12521023	12521098	789624	2	440,126,	0,39976,
#Partially deleted in new
chr12	12521080	12561077	chr12:12521080-12561077	0	-	12521080	12521098	8553170	3	383,124,78,	0,33455,39919,
#Partially deleted in new
chr12	12521326	12560886	chr12:12521326-12560886	0	-	12521326	12521326	8553170	2	137,121,	0,39439,
#Deleted in new
chr12	12568200	12568776	chr12:12568200-12568776	7	-	12568200	12568200	16724991	1	576,	0,
#Partially deleted in new
chr12	12611826	12637574	chr12:12611826-12637574	0	+	12611826	12611826	8553170	4	361,103,198,5,	0,20662,23950,25743,
#Partially deleted in new
chr12	12611891	12645108	chr12:12611891-12645108	3	+	12612172	12641998	789624	4	296,198,145,3115,	0,23885,25678,30102,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	12614358	12615907	chr12:12614358-12615907	7	-	12614358	12614358	16724991	4	118,91,61,126,	0,414,1080,1423,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	12648938	12649713	chr12:12648938-12649713	3	+	12648938	12648938	8553170	1	775,	0,
#Partially deleted in new
chr12	12660890	12684521	chr12:12660890-12684521	1	-	12661200	12662448	789624	2	1580,171,	0,23460,
#Partially deleted in new
chr12	12661060	12696187	chr12:12661060-12696187	3	-	12661200	12662448	789624	4	1410,157,53,123,	0,23290,34398,35004,
#Partially deleted in new
chr12	12662270	12696207	chr12:12662270-12696207	0	-	12662270	12662448	789624	4	200,157,53,143,	0,22080,33188,33794,
#Partially deleted in new
chr12	12668981	12685075	chr12:12668981-12685075	3	+	12668981	12668981	8553170	2	70,171,	0,15923,
#Partially deleted in new
chr12	12684094	12696183	chr12:12684094-12696183	0	-	12684094	12684094	8553170	3	413,53,119,	0,11364,11970,
#Partially deleted in new
chr12	12684397	12696187	chr12:12684397-12696187	0	-	12684397	12684397	8553170	4	110,420,53,123,	0,4115,11061,11667,
#Partially deleted in new
chr12	12715057	12721204	chr12:12715057-12721204	0	+	12715057	12715057	8553170	4	47,107,130,169,	0,719,3767,5978,
#Partially deleted in new
chr12	12717123	12722371	chr12:12717123-12722371	3	+	12717839	12718946	0	3	1191,130,1336,	0,1701,3912,
#Partially deleted in new
chr12	12717821	12721468	chr12:12717821-12721468	1	+	12717839	12721207	789624	2	493,404,	0,3243,
#Partially deleted in new
chr12	12717860	12721289	chr12:12717860-12721289	0	+	12717860	12718946	789624	3	193,130,254,	0,964,3175,
#Deleted in new
chr12	12718972	12719521	chr12:12718972-12719521	3	+	12718972	12718972	8553170	1	549,	0,
#Deleted in new
chr12	12723296	12724011	chr12:12723296-12724011	3	-	12723296	12723296	8553170	2	39,111,	0,604,
#Partially deleted in new
chr12	12725916	12814199	chr12:12725916-12814199	0	+	12726000	12726323	789624	4	180,77,248,69,	0,380,87290,88214,
#Partially deleted in new
chr12	12725928	12829975	chr12:12725928-12829975	0	+	12726000	12726323	789624	15	168,77,180,248,94,189,72,119,72,117,147,138,71,130,553,	0,368,86332,87278,88202,95279,95726,96036,96732,97274,97941,98611,100071,101317,103494,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	12725930	12791466	chr12:12725930-12791466	1	+	12726000	12787652	789624	2	166,4558,	0,60978,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	12726025	12812650	chr12:12726025-12812650	0	+	12726025	12726025	8553170	2	71,390,	0,86235,
#Deleted in new
chr12	12764648	12764743	chr12:12764648-12764743	3	+	12764648	12764648	5263520	1	95,	0,
#Partially deleted in new
chr12	12771350	12771705	chr12:12771350-12771705	7	-	12771350	12771350	16724991	1	355,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	12785606	12791466	chr12:12785606-12791466	3	+	12785691	12787652	789624	2	88,4558,	0,1302,
#Partially deleted in new
chr12	12813315	12829979	chr12:12813315-12829979	1	+	12813367	12829554	0	11	139,94,189,72,119,72,117,138,71,130,557,	0,815,7892,8339,8649,9345,9887,11224,12684,13930,16107,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	12813315	12825107	chr12:12813315-12825107	0	+	12813315	12813315	8553170	9	139,94,189,72,119,72,117,147,568,	0,815,7892,8339,8649,9345,9887,10554,11224,
#Partially deleted in new
chr12	12813345	12829981	chr12:12813345-12829981	3	+	12813367	12829554	0	12	109,94,189,72,119,72,117,147,138,71,130,559,	0,785,7862,8309,8619,9315,9857,10524,11194,12654,13900,16077,
#Partially deleted in new
chr12	12813345	12821969	chr12:12813345-12821969	0	+	12813345	12813345	8553170	5	171,94,189,72,5,	0,785,7862,8309,8619,
#Partially deleted in new
chr12	12813345	12822048	chr12:12813345-12822048	0	+	12813345	12813345	8553170	3	109,94,841,	0,785,7862,
#Partially deleted in new
chr12	12813353	12829979	chr12:12813353-12829979	0	+	12813353	12813353	8553170	11	101,94,189,72,119,72,814,138,71,130,557,	0,777,7854,8301,8611,9307,9849,11186,12646,13892,16069,
#Partially deleted in new
chr12	12813354	12814658	chr12:12813354-12814658	0	+	12813354	12813354	8553170	2	100,528,	0,776,
#Partially deleted in new
chr12	12813357	12829981	chr12:12813357-12829981	0	+	12813357	12813357	8553170	9	97,94,72,119,72,1475,71,130,559,	0,773,8297,8607,9303,9845,12642,13888,16065,
#Partially deleted in new
chr12	12813359	12824567	chr12:12813359-12824567	0	+	12813367	12824567	789624	7	95,94,72,119,72,117,28,	0,771,8295,8605,9301,9843,11180,
#Partially deleted in new
chr12	12820276	12823259	chr12:12820276-12823259	0	+	12820276	12820276	8553170	6	45,189,72,119,72,57,	0,931,1378,1688,2384,2926,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	12820347	12821337	chr12:12820347-12821337	0	+	12820347	12820347	8553170	2	431,130,	0,860,
#Partially deleted in new
chr12	12824384	12826292	chr12:12824384-12826292	0	+	12824384	12824384	8553170	2	293,293,	0,1615,
#Deleted in new
chr12	12840803	12841079	chr12:12840803-12841079	7	-	12840803	12840803	16724991	1	276,	0,
#Partially deleted in new
chr12	12850981	12851740	chr12:12850981-12851740	7	+	12850981	12850981	16724991	1	759,	0,
#Partially deleted in new
chr12	12875498	12876107	chr12:12875498-12876107	7	+	12875498	12875498	16724991	1	609,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	12890781	12917937	chr12:12890781-12917937	3	+	12908249	12912539	789624	4	883,929,59,5491,	0,17461,21302,21665,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	12891558	12909876	chr12:12891558-12909876	0	+	12891558	12891558	8553170	2	106,1634,	0,16684,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	12891578	12913133	chr12:12891578-12913133	0	+	12891578	12891578	8553170	3	86,59,687,	0,20505,20868,
#Partially deleted in new
chr12	12891973	12909070	chr12:12891973-12909070	0	+	12908249	12909070	789624	2	69,828,	0,16269,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	12908243	12913411	chr12:12908243-12913411	1	+	12908249	12912181	8553170	3	928,217,965,	0,3840,4203,
#Partially deleted in new
chr12	12909068	12912509	chr12:12909068-12912509	0	+	12909068	12912181	789624	2	103,426,	0,3015,
#Deleted in new
chr12	12915828	12915918	chr12:12915828-12915918	3	+	12915828	12915828	5263520	1	90,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	12927725	12980307	chr12:12927725-12980307	3	+	12927725	12927725	8553170	4	78,81,99,308,	0,51215,51798,52274,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	12927763	12980094	chr12:12927763-12980094	1	+	12927763	12927763	8553170	4	40,139,192,95,	0,38995,51667,52236,
#Partially deleted in new
chr12	12940774	12950384	chr12:12940774-12950384	1	-	12940774	12950384	789624	3	75,68,895,	0,1486,8715,
#Partially deleted in new
chr12	12940841	12950384	chr12:12940841-12950384	3	-	12940841	12950384	789624	2	8,895,	0,8648,
#Partially deleted in new
chr12	12947164	12948577	chr12:12947164-12948577	0	+	12947164	12947164	8553170	2	74,383,	0,1030,
#Partially deleted in new
chr12	12950022	12952147	chr12:12950022-12952147	0	-	12950022	12950384	789624	2	407,41,	0,2084,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	12962299	12963539	chr12:12962299-12963539	3	+	12962299	12962299	8553170	2	107,262,	0,978,
#Deleted in new
chr12	12972052	12972143	chr12:12972052-12972143	3	+	12972052	12972052	8553170	1	91,	0,
#Partially deleted in new
chr12	12974863	13000273	chr12:12974863-13000273	3	-	12975307	13000114	789624	4	616,181,139,237,	0,12288,14413,25173,
#Partially deleted in new
chr12	12975066	13000172	chr12:12975066-13000172	0	-	12975307	13000172	8553170	4	413,181,135,136,	0,12085,14210,24970,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	12975314	12979795	chr12:12975314-12979795	0	-	12975314	12975314	8553170	3	165,155,332,	0,2108,4149,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	12979836	12984645	chr12:12979836-12984645	1	+	12979836	12979836	789624	3	52,392,1302,	0,163,3507,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	12979836	12984012	chr12:12979836-12984012	0	+	12979836	12979836	8553170	2	52,669,	0,3507,
#Partially deleted in new
chr12	12983460	12989280	chr12:12983460-12989280	0	-	12983731	12989280	789624	3	275,181,4,	0,3691,5816,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	12985644	13000265	chr12:12985644-13000265	1	-	12987147	13000114	789624	3	1688,139,229,	0,3632,14392,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	13000419	13004830	chr12:13000419-13004830	7	+	13000419	13000419	16724991	1	4411,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	13000450	13040679	chr12:13000450-13040679	3	+	13000450	13000450	8553170	5	31,61,933,148,1230,	0,7644,19061,21563,38999,
#Deleted in new
chr12	13001498	13002834	chr12:13001498-13002834	5	+	13001498	13001498	16724991	1	1336,	0,
#Deleted in new
chr12	13021259	13021606	chr12:13021259-13021606	7	-	13021259	13021259	16724991	1	347,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	13044283	13083449	chr12:13044283-13083449	3	+	13044403	13080630	789624	13	157,396,99,189,131,148,142,144,82,156,118,221,2825,	0,11267,14167,17291,18561,22356,22871,24020,24346,26957,31742,35505,36341,
#Partially deleted in new
chr12	13044380	13083449	chr12:13044380-13083449	0	+	13044403	13080630	789624	14	60,396,99,189,131,148,142,144,82,156,118,221,290,447,	0,11170,14070,17194,18464,22259,22774,23923,24249,26860,31645,35408,36244,38622,
#Partially deleted in new
chr12	13061714	13142521	chr12:13061714-13142521	0	+	13061714	13141485	789624	9	49,131,148,142,144,82,156,118,1041,	0,1130,4925,5440,6589,6915,9526,14311,79766,
#Deleted in new
chr12	13062179	13062879	chr12:13062179-13062879	0	+	13062179	13062179	8553170	2	543,35,	0,665,
#Partially deleted in new
chr12	13062755	13081312	chr12:13062755-13081312	0	+	13062755	13062755	8553170	7	220,144,82,156,118,178,688,	0,5548,5874,8485,13270,17076,17869,
#Deleted in new
chr12	13066828	13068374	chr12:13066828-13068374	0	+	13066828	13066828	8553170	2	468,71,	0,1475,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	13083559	13095675	chr12:13083559-13095675	1	-	13084900	13095607	789624	6	1684,112,153,48,316,77,	0,3592,4347,5302,6943,12039,
#Partially deleted in new
chr12	13084576	13095806	chr12:13084576-13095806	3	-	13085147	13095607	789624	6	667,112,153,172,316,208,	0,2575,3330,4161,5926,11022,
#Partially deleted in new
chr12	13084586	13095648	chr12:13084586-13095648	1	-	13084900	13095607	789624	5	657,112,48,316,50,	0,2565,4275,5916,11012,
#Partially deleted in new
chr12	13084822	13103645	chr12:13084822-13103645	1	-	13084900	13103512	789624	6	421,112,153,48,316,181,	0,2329,3084,4039,5680,18642,
#Partially deleted in new
chr12	13084824	13103645	chr12:13084824-13103645	1	-	13085147	13103512	789624	7	419,112,153,172,69,316,181,	0,2327,3082,3913,4383,5678,18640,
#Partially deleted in new
chr12	13084824	13095662	chr12:13084824-13095662	1	-	13084900	13095607	789624	6	419,112,48,69,316,64,	0,2327,4037,4383,5678,10774,
#Partially deleted in new
chr12	13087244	13103642	chr12:13087244-13103642	0	-	13087244	13103512	789624	5	19,153,172,316,178,	0,662,1493,3258,16220,
#Partially deleted in new
chr12	13087951	13103683	chr12:13087951-13103683	0	-	13087951	13103512	789624	5	108,48,141,316,219,	0,910,1256,2551,15513,
#Partially deleted in new
chr12	13088742	13095676	chr12:13088742-13095676	0	-	13088742	13095607	789624	4	167,141,316,78,	0,465,1760,6856,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	13196715	13219939	chr12:13196715-13219939	3	+	13211510	13214691	789624	5	157,120,97,141,5406,	0,14753,16763,16965,17818,
#Partially deleted in new
chr12	13196722	13215281	chr12:13196722-13215281	1	+	13213706	13214691	789624	3	150,141,748,	0,16958,17811,
#Partially deleted in new
chr12	13196725	13215395	chr12:13196725-13215395	0	+	13196725	13196725	8553170	3	147,72,360,	0,14743,18310,
#Partially deleted in new
chr12	13196725	13211520	chr12:13196725-13211520	0	+	13211510	13211520	8553170	3	147,356,52,	0,2452,14743,
#Partially deleted in new
chr12	13196725	13214872	chr12:13196725-13214872	1	+	13213706	13213991	789624	3	147,97,1192,	0,16753,16955,
#Partially deleted in new
chr12	13196782	13213944	chr12:13196782-13213944	0	+	13211510	13213944	789624	4	90,120,97,264,	0,14686,16696,16898,
#Partially deleted in new
chr12	13196785	13214800	chr12:13196785-13214800	1	+	13211510	13214680	789624	5	87,120,97,141,230,	0,14683,16693,16895,17785,
#Partially deleted in new
chr12	13196785	13209570	chr12:13196785-13209570	0	+	13196785	13196785	8553170	2	87,471,	0,12314,
#Partially deleted in new
chr12	13196785	13211902	chr12:13196785-13211902	0	+	13196785	13196785	8553170	2	87,434,	0,14683,
#Deleted in new
chr12	13211510	13216773	chr12:13211510-13216773	1	+	13211510	13216478	789624	3	78,97,330,	0,1968,4933,
#Deleted in new
chr12	13213414	13214818	chr12:13213414-13214818	0	+	13213414	13213414	8553170	3	161,141,285,	0,266,1119,
#Deleted in new
chr12	13213451	13214365	chr12:13213451-13214365	0	+	13213451	13213451	8553170	2	124,685,	0,229,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	13373013	13376430	chr12:13373013-13376430	0	-	13373013	13373013	8553170	2	425,207,	0,3210,
#Partially deleted in new
chr12	13375526	13387167	chr12:13375526-13387167	0	-	13375526	13375526	8553170	2	899,104,	0,11537,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	13440883	13441001	chr12:13440883-13441001	7	-	13440883	13440883	16724991	1	118,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	13459669	13459776	chr12:13459669-13459776	3	-	13459669	13459669	8553170	1	107,	0,
#Partially deleted in new
chr12	13526853	13530875	chr12:13526853-13530875	1	+	13526853	13526853	8553170	2	94,219,	0,3803,
#Partially deleted in new
chr12	13530654	13547582	chr12:13530654-13547582	3	+	13530654	13530654	8553170	2	119,263,	0,16665,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	13537336	13980363	chr12:13537336-13980363	3	-	13562782	13866208	0	13	27303,239,188,161,230,126,154,172,203,115,599,429,436,	0,29688,32493,34467,71266,74388,77777,78156,79118,138408,215980,328461,442591,
#Deleted in new
chr12	13540230	13544540	chr12:13540230-13544540	3	+	13540230	13540230	8553170	2	146,400,	0,3910,
#Deleted in new
chr12	13561876	13562291	chr12:13561876-13562291	0	-	13561876	13561876	8553170	2	46,54,	0,361,
#Partially deleted in new
chr12	13562809	13610018	chr12:13562809-13610018	0	-	13562809	13562809	8553170	6	1830,239,188,161,230,40,	0,4215,7020,8994,45793,47169,
#Partially deleted in new
chr12	13634175	13675767	chr12:13634175-13675767	0	-	13634175	13634175	8553170	2	77,23,	0,41569,
#Partially deleted in new
chr12	13670280	13675820	chr12:13670280-13675820	0	-	13670280	13670280	8553170	2	63,76,	0,5464,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	13683541	13683886	chr12:13683541-13683886	3	+	13683541	13683541	8553170	1	345,	0,
#Partially deleted in new
chr12	13866102	13981957	chr12:13866102-13981957	0	-	13866102	13866208	789624	3	124,429,42,	0,113825,115813,
#Partially deleted in new
chr12	13866102	13981957	chr12:13866102-13981957	0	-	13866102	13866208	789624	4	124,429,235,42,	0,113825,115239,115813,
#Deleted in new
chr12	13977345	13979983	chr12:13977345-13979983	0	-	13977345	13977345	8553170	2	59,56,	0,2582,
#Deleted in new
chr12	14169745	14169877	chr12:14169745-14169877	7	+	14169745	14169745	16724991	1	132,	0,
#Partially deleted in new
chr12	14192001	14192284	chr12:14192001-14192284	7	+	14192001	14192001	16724991	1	283,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	14216589	14221297	chr12:14216589-14221297	3	+	14216589	14216589	8553170	2	204,436,	0,4272,
#Deleted in new
chr12	14237090	14237321	chr12:14237090-14237321	7	+	14237090	14237090	16724991	1	231,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	14250231	14250341	chr12:14250231-14250341	3	-	14250231	14250231	8553170	1	110,	0,
#Deleted in new
chr12	14254911	14255226	chr12:14254911-14255226	7	+	14254911	14254911	16724991	1	315,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	14356841	14357151	chr12:14356841-14357151	5	-	14356841	14356841	16724991	1	310,	0,
#Partially deleted in new
chr12	14356864	14357517	chr12:14356864-14357517	5	-	14356864	14356864	16724991	2	270,69,	0,584,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	14357295	14365503	chr12:14357295-14365503	7	-	14357295	14357295	16724991	2	291,67,	0,8141,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	14365631	14502935	chr12:14365631-14502935	3	+	14423915	14498073	0	15	196,1565,87,146,138,66,74,89,639,65,79,156,183,113,5282,	0,58277,68705,70474,72498,81356,90929,91575,94863,100894,110258,112685,115371,130599,132022,
#Partially deleted in new
chr12	14365675	14460567	chr12:14365675-14460567	0	+	14365675	14365675	8553170	8	152,1565,84,146,138,66,74,73,	0,58233,68664,70430,72454,81312,90885,94819,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	14365676	14476432	chr12:14365676-14476432	0	+	14365676	14365676	8553170	11	151,1565,87,146,138,66,74,89,639,65,543,	0,58232,68660,70429,72453,81311,90884,91530,94818,100849,110213,
#Partially deleted in new
chr12	14365683	14447030	chr12:14365683-14447030	0	+	14436143	14447030	789624	5	144,87,146,138,43,	0,68653,70422,72446,81304,
#Partially deleted in new
chr12	14365687	14438247	chr12:14365687-14438247	0	+	14423915	14438247	789624	4	140,262,57,118,	0,58221,70507,72442,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	14365692	14482653	chr12:14365692-14482653	1	+	14423915	14481226	0	13	135,1565,84,146,138,66,74,89,639,65,79,156,1651,	0,58216,68647,70413,72437,81295,90868,91514,94802,100833,110197,112624,115310,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	14365728	14502931	chr12:14365728-14502931	1	+	14423915	14498073	0	15	99,1565,84,146,138,66,74,89,639,65,79,156,183,113,5278,	0,58180,68611,70377,72401,81259,90832,91478,94766,100797,110161,112588,115274,130502,131925,
#Partially deleted in new
chr12	14367323	14424443	chr12:14367323-14424443	0	+	14423915	14424443	789624	2	29,535,	0,56585,
#Partially deleted in new
chr12	14367362	14424371	chr12:14367362-14424371	0	+	14423915	14424371	789624	2	87,463,	0,56546,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	14367372	14424224	chr12:14367372-14424224	0	+	14423915	14424224	789624	3	77,179,316,	0,1773,56536,
#Partially deleted in new
chr12	14385063	14498763	chr12:14385063-14498763	1	+	14385383	14498073	0	15	337,1565,87,146,138,66,74,89,639,65,79,156,183,113,1110,	0,38845,49273,51042,53066,61924,71497,72143,75431,81462,90826,93253,95939,111167,112590,
#Partially deleted in new
chr12	14385315	14461021	chr12:14385315-14461021	0	+	14385315	14385315	8553170	8	85,1565,87,146,138,66,74,527,	0,38593,49021,50790,52814,61672,71245,75179,
#Partially deleted in new
chr12	14394862	14424092	chr12:14394862-14424092	0	+	14423915	14424092	789624	2	390,184,	0,29046,
#Partially deleted in new
chr12	14408489	14424423	chr12:14408489-14424423	0	+	14423915	14424423	789624	2	55,515,	0,15419,
#Partially deleted in new
chr12	14416912	14424445	chr12:14416912-14424445	0	+	14423915	14424445	789624	2	36,537,	0,6996,
#Partially deleted in new
chr12	14419135	14424421	chr12:14419135-14424421	0	+	14423915	14424421	789624	2	55,513,	0,4773,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	14419163	14424291	chr12:14419163-14424291	0	+	14423915	14424291	789624	3	27,145,383,	0,1138,4745,
#Partially deleted in new
chr12	14419187	14425461	chr12:14419187-14425461	0	+	14423915	14425461	789624	2	174,1553,	0,4721,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	14419192	14424312	chr12:14419192-14424312	0	+	14423915	14424312	789624	3	26,145,404,	0,1109,4716,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	14419210	14424183	chr12:14419210-14424183	0	+	14423915	14424183	789624	3	151,145,275,	0,1091,4698,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	14419970	14424012	chr12:14419970-14424012	0	+	14423915	14424012	789624	2	476,104,	0,3938,
#Partially deleted in new
chr12	14423760	14498247	chr12:14423760-14498247	1	+	14423915	14498073	0	14	1713,87,146,138,66,74,89,639,65,79,156,183,113,594,	0,10576,12345,14369,23227,32800,33446,36734,42765,52129,54556,57242,72470,73893,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	14466109	14476154	chr12:14466109-14476154	0	+	14466109	14466109	8553170	2	481,265,	0,9780,
#Partially deleted in new
chr12	14478335	14481906	chr12:14478335-14481906	0	+	14478335	14481633	789624	3	137,183,299,	0,2667,3272,
#Partially deleted in new
chr12	14503660	14568349	chr12:14503660-14568349	3	-	14503771	14567696	789624	11	294,107,186,141,201,145,141,139,84,220,768,	0,2501,3272,7599,7850,31998,32909,37103,38547,49532,63921,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	14511259	14536125	chr12:14511259-14536125	0	-	14511259	14511259	8553170	3	141,201,467,	0,251,24399,
#Partially deleted in new
chr12	14511510	14567728	chr12:14511510-14567728	0	-	14542283	14567696	789624	6	201,145,141,139,84,147,	0,24148,25059,29253,30697,56071,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	14530150	14533229	chr12:14530150-14533229	3	+	14530150	14530150	8553170	3	91,169,167,	0,891,2912,
#Partially deleted in new
chr12	14536693	14554246	chr12:14536693-14554246	0	-	14536693	14553386	789624	5	17,139,84,220,93,	0,4070,5514,16499,17460,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	14553701	14553970	chr12:14553701-14553970	3	-	14553701	14553701	8553170	1	269,	0,
#Partially deleted in new
chr12	14567749	14619298	chr12:14567749-14619298	0	+	14567749	14567749	8553170	5	57,174,48,49,147,	0,269,45129,46772,51402,
#Partially deleted in new
chr12	14567990	14619755	chr12:14567990-14619755	3	+	14567990	14567990	789624	5	202,48,49,222,18,	0,44888,46531,51161,51747,
#Partially deleted in new
chr12	14612631	14696585	chr12:14612631-14696585	3	-	14613116	14696448	789624	27	660,77,95,99,175,193,159,92,89,138,133,87,105,72,63,106,82,112,86,136,118,97,122,216,65,113,354,	0,2235,4001,6579,8410,9373,13125,16014,27230,28450,30942,32597,38775,39327,40320,43880,48349,57090,60241,61993,64222,67025,68724,70410,73529,75319,83600,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	14665654	14757963	chr12:14665654-14757963	3	+	14665654	14665654	8553170	5	43,155,49,41,369,	0,204,6611,52380,91940,
#Partially deleted in new
chr12	14674291	14696575	chr12:14674291-14696575	0	-	14674291	14674291	8553170	8	469,118,97,122,216,65,113,344,	0,2562,5365,7064,8750,11869,13659,21940,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	14762503	14767931	chr12:14762503-14767931	3	-	14762503	14762503	8553170	1	5428,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	14767998	14771131	chr12:14767998-14771131	0	-	14770772	14771084	0	2	1465,453,	0,2680,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	14768157	14769622	chr12:14768157-14769622	0	-	14768157	14768157	8553170	2	44,328,	0,1137,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	14768924	14770170	chr12:14768924-14770170	0	-	14768924	14768924	8553170	2	539,271,	0,975,
#Partially deleted in new
chr12	14768938	14770276	chr12:14768938-14770276	0	-	14768938	14768938	8553170	2	71,377,	0,961,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	14768995	14770793	chr12:14768995-14770793	0	-	14768995	14768995	8553170	2	462,115,	0,1683,
#Deleted in new
chr12	14770554	14771131	chr12:14770554-14771131	3	-	14770772	14771084	0	1	577,	0,
#Deleted in new
chr12	14774382	14775026	chr12:14774382-14775026	3	+	14774470	14774860	0	1	644,	0,
#Deleted in new
chr12	14774418	14775581	chr12:14774418-14775581	0	+	14774470	14774860	0	2	494,291,	0,872,
#Deleted in new
chr12	14774581	14778002	chr12:14774581-14778002	0	+	14774581	14774860	789624	2	395,2712,	0,709,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	14784578	14803540	chr12:14784578-14803540	3	-	14787064	14801383	789624	12	2920,183,294,102,192,200,134,197,94,32,109,189,	0,4372,5877,6590,9152,9958,10392,12228,15056,16173,16741,18773,
#Partially deleted in new
chr12	14790688	14801428	chr12:14790688-14801428	0	-	14791264	14801383	789624	7	61,102,192,197,94,32,109,	0,480,3042,6118,8946,10063,10631,
#Partially deleted in new
chr12	14799440	14803486	chr12:14799440-14803486	0	-	14799440	14799440	8553170	4	288,32,109,135,	0,1311,1879,3911,
#Partially deleted in new
chr12	14799665	14803486	chr12:14799665-14803486	0	-	14799665	14801383	789624	5	63,32,109,155,135,	0,1086,1654,2212,3686,
#Deleted in new
chr12	14800999	14803476	chr12:14800999-14803476	0	-	14800999	14800999	8553170	2	429,125,	0,2352,
#Partially deleted in new
chr12	14803571	14824415	chr12:14803571-14824415	3	+	14822935	14823673	789624	2	180,1504,	0,19340,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	14803665	14904610	chr12:14803665-14904610	0	+	14803665	14803665	8553170	2	86,604,	0,100341,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	14803668	14905257	chr12:14803668-14905257	0	+	14803668	14803668	8553170	3	83,42,1251,	0,25969,100338,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	14803676	14906586	chr12:14803676-14906586	0	+	14803676	14803676	8553170	4	75,122,93,2580,	0,95492,97934,100330,
#Partially deleted in new
chr12	14804649	14814182	chr12:14804649-14814182	3	-	14806002	14806680	789624	2	2047,57,	0,9476,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	14825568	14843533	chr12:14825568-14843533	3	-	14829370	14843113	789624	3	3894,709,564,	0,14876,17401,
#Partially deleted in new
chr12	14829353	14843062	chr12:14829353-14843062	0	-	14829429	14843062	789624	3	109,72,93,	0,11728,13616,
#Partially deleted in new
chr12	14829353	14843062	chr12:14829353-14843062	0	-	14829429	14843062	789624	2	109,93,	0,13616,
#Deleted in new
chr12	14840359	14843062	chr12:14840359-14843062	0	-	14840424	14843062	789624	2	794,93,	0,2610,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	14841091	14844708	chr12:14841091-14844708	3	+	14841091	14841091	8553170	2	143,214,	0,3403,
#Partially deleted in new
chr12	14881180	14885926	chr12:14881180-14885926	3	-	14882138	14885791	789624	4	1100,76,33,196,	0,1791,3032,4550,
#Partially deleted in new
chr12	14881890	14884245	chr12:14881890-14884245	0	-	14882089	14884245	789624	2	390,33,	0,2322,
#Partially deleted in new
chr12	14881897	14885857	chr12:14881897-14885857	1	-	14882138	14885791	789624	5	383,76,33,75,127,	0,1074,2315,2915,3833,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	14883053	14885854	chr12:14883053-14885854	0	-	14883053	14883053	8553170	2	1192,124,	0,2677,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	14885715	14904661	chr12:14885715-14904661	0	+	14885715	14885715	8553170	2	91,655,	0,18291,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	14914034	14939082	chr12:14914034-14939082	3	-	14914734	14938508	0	7	748,198,126,117,138,101,668,	0,1454,3143,6897,20821,23917,24380,
#Partially deleted in new
chr12	14914411	14929125	chr12:14914411-14929125	1	-	14914734	14928974	789624	5	371,198,126,117,181,	0,1077,2766,6520,14533,
#Deleted in new
chr12	14915645	14917279	chr12:14915645-14917279	0	-	14915645	14915645	8553170	2	190,102,	0,1532,
#Partially deleted in new
chr12	14942016	14961669	chr12:14942016-14961669	3	-	14942521	14950712	0	6	705,64,77,84,193,133,	0,2759,5856,7785,8515,19520,
#Partially deleted in new
chr12	14942044	14950695	chr12:14942044-14950695	0	-	14942521	14950695	789624	5	677,64,74,84,164,	0,2731,5828,7757,8487,
#Partially deleted in new
chr12	14942329	14951106	chr12:14942329-14951106	1	-	14942521	14950712	0	6	392,64,77,84,193,101,	0,2446,5543,7472,8202,8676,
#Partially deleted in new
chr12	14942369	14948896	chr12:14942369-14948896	0	-	14942369	14942369	789624	4	352,64,77,97,	0,2406,5503,6430,
#Partially deleted in new
chr12	14942507	14961605	chr12:14942507-14961605	1	-	14942521	14950712	0	7	214,64,77,84,193,158,69,	0,2268,5365,7294,8024,13668,19029,
#Partially deleted in new
chr12	14942651	14951151	chr12:14942651-14951151	0	-	14942651	14950712	789624	6	70,64,77,84,193,235,	0,2124,5221,7150,7880,8265,
#Partially deleted in new
chr12	14947688	14961591	chr12:14947688-14961591	0	-	14947688	14947688	8553170	4	261,84,193,55,	0,2113,2843,13848,
#Partially deleted in new
chr12	14947876	14961266	chr12:14947876-14961266	0	-	14947876	14950712	789624	4	73,84,193,113,	0,1925,2655,13277,
#Partially deleted in new
chr12	14949801	14961728	chr12:14949801-14961728	0	-	14949801	14950712	789624	3	84,193,77,	0,730,11850,
#Partially deleted in new
chr12	14973021	14981865	chr12:14973021-14981865	3	+	14978012	14981476	789624	4	65,175,41,466,	0,4950,6157,8378,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	15001832	15006683	chr12:15001832-15006683	3	+	15001832	15001832	789624	4	74,101,107,323,	0,1102,3267,4528,
#Partially deleted in new
chr12	15107782	15221417	chr12:15107782-15221417	3	-	15109109	15217489	0	5	1735,74,57,175,223,	0,3561,13280,109646,113412,
#Partially deleted in new
chr12	15107789	15217629	chr12:15107789-15217629	1	-	15109109	15217489	0	4	1728,74,57,201,	0,3554,13273,109639,
#Partially deleted in new
chr12	15107816	15218051	chr12:15107816-15218051	1	-	15109109	15217489	0	5	1701,74,57,175,127,	0,3527,13246,109612,110108,
#Partially deleted in new
chr12	15108606	15221417	chr12:15108606-15221417	1	-	15109109	15217489	0	4	911,74,175,223,	0,2737,108822,112588,
#Partially deleted in new
chr12	15109408	15138163	chr12:15109408-15138163	0	-	15109408	15137929	789624	4	109,74,57,334,	0,1935,11654,28421,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	15110926	15221406	chr12:15110926-15221406	1	-	15111322	15217489	789624	4	491,57,175,212,	0,10136,106502,110268,
#Deleted in new
chr12	15112362	15114698	chr12:15112362-15114698	3	-	15112362	15112362	8553170	2	107,194,	0,2142,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	15121064	15348598	chr12:15121064-15348598	0	-	15121064	15217489	789624	4	55,175,94,331,	0,96364,216312,227203,
#Partially deleted in new
chr12	15151922	15155283	chr12:15151922-15155283	3	+	15151922	15151922	789624	3	148,101,88,	0,2317,3273,
#Deleted in new
chr12	15217095	15221268	chr12:15217095-15221268	0	-	15217095	15217095	8553170	2	508,74,	0,4099,
#Deleted in new
chr12	15255212	15255823	chr12:15255212-15255823	7	-	15255212	15255212	16724991	1	611,	0,
#Partially deleted in new
chr12	15322396	15597393	chr12:15322396-15597393	3	+	15322726	15595041	0	27	405,274,159,153,444,162,197,121,194,112,152,121,140,133,121,69,84,36,82,91,77,135,123,155,136,121,1304,	0,161577,174848,177045,179223,181511,186174,193101,194366,197804,202417,203745,224172,226697,229154,235058,237796,243196,247020,256456,257642,258300,259282,264500,267058,272540,273693,
#Partially deleted in new
chr12	15322542	15517063	chr12:15322542-15517063	1	+	15322726	15516971	0	9	259,274,159,153,444,162,197,121,301,	0,161431,174702,176899,179077,181365,186028,192955,194220,
#Partially deleted in new
chr12	15322552	15597393	chr12:15322552-15597393	1	+	15322726	15595041	0	26	249,274,159,153,444,162,197,121,194,112,152,121,140,133,121,69,36,82,91,77,135,123,155,136,121,1304,	0,161421,174692,176889,179067,181355,186018,192945,194210,197648,202261,203589,224016,226541,228998,234902,243040,246864,256300,257486,258144,259126,264344,266902,272384,273537,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	15322776	15410766	chr12:15322776-15410766	0	+	15322776	15322776	8553170	2	25,487,	0,87503,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	15346476	15348675	chr12:15346476-15348675	0	-	15346476	15346476	8553170	2	149,413,	0,1786,
#Deleted in new
chr12	15439526	15440401	chr12:15439526-15440401	7	+	15439526	15439526	16724991	1	875,	0,
#Partially deleted in new
chr12	15546351	15597399	chr12:15546351-15597399	1	+	15549222	15595041	0	15	357,133,121,69,84,36,82,91,77,135,123,155,136,121,1310,	0,2742,5199,11103,13841,19241,23065,32501,33687,34345,35327,40545,43103,48585,49738,
#Partially deleted in new
chr12	15546351	15597399	chr12:15546351-15597399	1	+	15549222	15595041	0	14	357,133,121,69,84,36,82,91,77,135,123,155,136,2463,	0,2742,5199,11103,13841,19241,23065,32501,33687,34345,35327,40545,43103,48585,
#Partially deleted in new
chr12	15546351	15597399	chr12:15546351-15597399	1	+	15549222	15595041	0	14	357,133,121,69,36,82,91,77,135,123,155,136,121,1310,	0,2742,5199,11103,19241,23065,32501,33687,34345,35327,40545,43103,48585,49738,
#Partially deleted in new
chr12	15546351	15597399	chr12:15546351-15597399	1	+	15549222	15595041	0	13	357,133,121,69,36,82,91,77,135,123,155,136,2463,	0,2742,5199,11103,19241,23065,32501,33687,34345,35327,40545,43103,48585,
#Partially deleted in new
chr12	15546617	15580069	chr12:15546617-15580069	0	+	15546617	15557495	789624	7	91,133,69,36,82,91,31,	0,2476,10837,18975,22799,32235,33421,
#Partially deleted in new
chr12	15565348	15580746	chr12:15565348-15580746	0	+	15565348	15565348	8553170	5	280,82,91,77,50,	0,4068,13504,14690,15348,
#Partially deleted in new
chr12	15580762	15587176	chr12:15580762-15587176	0	+	15580762	15587055	789624	3	69,123,280,	0,916,6134,
#Deleted in new
chr12	15595220	15596574	chr12:15595220-15596574	0	+	15595220	15595220	8553170	2	420,485,	0,869,
#Partially deleted in new
chr12	15620157	15789370	chr12:15620157-15789370	0	-	15662095	15682951	789624	20	1273,130,181,223,144,109,134,184,149,75,89,127,74,83,150,162,68,77,80,210,	0,3000,4069,11284,20545,21564,26969,30665,33987,37921,38339,40456,41868,46282,49229,49506,50698,61068,62735,169003,
#Partially deleted in new
chr12	15620157	15789388	chr12:15620157-15789388	1	-	15621316	15682951	0	22	1273,130,181,223,144,109,134,184,149,75,89,127,74,137,83,150,162,68,77,80,48,228,	0,3000,4069,11284,20545,21564,26969,30665,33987,37921,38339,40456,41868,45598,46282,49229,49506,50698,61068,62735,167805,169003,
#Partially deleted in new
chr12	15620161	15789576	chr12:15620161-15789576	1	-	15621316	15682951	0	21	1269,130,181,223,144,109,134,184,149,75,89,127,74,137,83,150,162,68,77,80,416,	0,2996,4065,11280,20541,21560,26965,30661,33983,37917,38335,40452,41864,45594,46278,49225,49502,50694,61064,62731,168999,
#Partially deleted in new
chr12	15620161	15789388	chr12:15620161-15789388	1	-	15621316	15682951	0	21	1269,130,181,223,144,109,134,184,149,75,89,127,74,137,83,150,162,68,77,80,228,	0,2996,4065,11280,20541,21560,26965,30661,33983,37917,38335,40452,41864,45594,46278,49225,49502,50694,61064,62731,168999,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr12	15620180	15882292	chr12:15620180-15882292	3	-	15621316	15682951	0	24	1250,130,181,223,144,109,134,184,149,75,89,127,74,137,83,150,162,68,77,80,192,152,93,513,	0,2977,4046,11261,20522,21541,26946,30642,33964,37898,38316,40433,41845,45575,46259,49206,49483,50675,61045,62712,208000,217392,260926,261599,
#Partially deleted in new
chr12	15620190	15789383	chr12:15620190-15789383	1	-	15621316	15682951	789624	23	1240,130,181,223,144,109,134,184,149,75,89,127,74,137,83,150,162,68,51,77,80,60,223,	0,2967,4036,11251,20512,21531,26936,30632,33954,37888,38306,40423,41835,45565,46249,49196,49473,50665,52263,61035,62702,93075,168970,
#Partially deleted in new
chr12	15620190	15789388	chr12:15620190-15789388	1	-	15621316	15682951	0	22	1240,130,181,223,144,109,134,184,149,75,89,127,74,137,83,150,162,68,77,80,60,228,	0,2967,4036,11251,20512,21531,26936,30632,33954,37888,38306,40423,41835,45565,46249,49196,49473,50665,61035,62702,93075,168970,
#Partially deleted in new
chr12	15620194	15881198	chr12:15620194-15881198	1	-	15621316	15682951	0	24	1236,130,181,223,144,109,134,184,149,75,89,127,74,137,83,150,162,68,77,80,60,191,63,92,	0,2963,4032,11247,20508,21527,26932,30628,33950,37884,38302,40419,41831,45561,46245,49192,49469,50661,61031,62698,93071,193367,196853,260912,
#Partially deleted in new
chr12	15620233	15818063	chr12:15620233-15818063	1	-	15621316	15682951	0	22	1197,130,181,223,144,109,134,184,149,75,89,127,74,137,83,150,162,68,77,80,226,11,	0,2924,3993,11208,20469,21488,26893,30589,33911,37845,38263,40380,41792,45522,46206,49153,49430,50622,60992,62659,168927,197819,
#Partially deleted in new
chr12	15620348	15789388	chr12:15620348-15789388	1	-	15621316	15682951	0	21	1082,130,181,223,144,109,134,184,149,75,89,127,74,137,83,150,162,68,77,1410,228,	0,2809,3878,11093,20354,21373,26778,30474,33796,37730,38148,40265,41677,45407,46091,49038,49315,50507,60877,62544,168812,
#Partially deleted in new
chr12	15620376	15789388	chr12:15620376-15789388	1	-	15621316	15682951	789624	22	1054,130,181,223,24,144,109,134,184,149,75,89,127,74,137,83,150,162,68,77,80,228,	0,2781,3850,11065,14362,20326,21345,26750,30446,33768,37702,38120,40237,41649,45379,46063,49010,49287,50479,60849,62516,168784,
#Partially deleted in new
chr12	15620411	15882324	chr12:15620411-15882324	1	-	15621316	15682951	0	23	1019,130,181,223,144,109,134,184,149,75,89,127,74,137,83,150,162,68,77,80,152,93,62,	0,2746,3815,11030,20291,21310,26715,30411,33733,37667,38085,40202,41614,45344,46028,48975,49252,50444,60814,62481,217161,260695,261851,
#Partially deleted in new
chr12	15620982	15712993	chr12:15620982-15712993	1	-	15621316	15682951	0	21	448,130,181,223,144,109,134,184,149,75,89,127,74,137,83,150,162,68,77,80,141,	0,2175,3244,10459,19720,20739,26144,29840,33162,37096,37514,39631,41043,44773,45457,48404,48681,49873,60243,61910,91870,
#Partially deleted in new
chr12	15621202	15662692	chr12:15621202-15662692	1	-	15621316	15662055	0	14	228,130,181,223,144,109,134,184,149,75,89,127,74,357,	0,1955,3024,10239,19500,20519,25924,29620,32942,36876,37294,39411,40823,41133,
#Partially deleted in new
chr12	15621273	15662274	chr12:15621273-15662274	1	-	15621316	15662055	0	14	157,130,181,223,144,109,134,184,149,75,89,127,74,82,	0,1884,2953,10168,19429,20448,25853,29549,32871,36805,37223,39340,40752,40919,
#Partially deleted in new
chr12	15623219	15631762	chr12:15623219-15631762	0	-	15623219	15623219	8553170	3	68,181,321,	0,1007,8222,
#Partially deleted in new
chr12	15647149	15654430	chr12:15647149-15654430	0	-	15647149	15647149	8553170	3	111,184,286,	0,3673,6995,
#Partially deleted in new
chr12	15657893	15662115	chr12:15657893-15662115	0	-	15657893	15657893	8553170	4	260,89,127,90,	0,603,2720,4132,
#Partially deleted in new
chr12	15658075	15666505	chr12:15658075-15666505	0	-	15665104	15666505	789624	7	78,89,127,74,84,137,66,	0,421,2538,3950,6947,7680,8364,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	15665348	15669467	chr12:15665348-15669467	0	-	15665348	15665348	8553170	3	544,83,81,	0,1091,4038,
#Partially deleted in new
chr12	15669465	15789400	chr12:15669465-15789400	0	-	15670856	15682951	789624	5	71,162,68,80,240,	0,198,1390,13427,119695,
#Partially deleted in new
chr12	15669518	15728265	chr12:15669518-15728265	0	-	15669518	15682951	789624	6	18,162,68,77,80,137,	0,145,1337,11707,13374,58610,
#Partially deleted in new
chr12	15669667	15882329	chr12:15669667-15882329	0	-	15669667	15682951	789624	6	158,68,77,80,93,67,	0,1188,11558,13225,211439,212595,
#Partially deleted in new
chr12	15670855	15789388	chr12:15670855-15789388	0	-	15670855	15682951	789624	5	68,77,80,106,228,	0,10370,12037,13341,118305,
#Partially deleted in new
chr12	15670855	15780727	chr12:15670855-15780727	0	-	15670855	15682951	789624	4	68,77,80,149,	0,10370,12037,109723,
#Partially deleted in new
chr12	15670858	15789381	chr12:15670858-15789381	0	-	15670858	15682951	789624	5	65,77,80,134,221,	0,10367,12034,13310,118302,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	15671706	15671810	chr12:15671706-15671810	3	-	15671706	15671706	8553170	1	104,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	15780067	15782120	chr12:15780067-15782120	3	+	15780067	15780067	8553170	2	83,382,	0,1671,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	15803163	15804158	chr12:15803163-15804158	7	+	15803163	15803163	16724991	2	365,295,	0,700,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	15813492	15828274	chr12:15813492-15828274	0	-	15813492	15813492	8553170	3	260,63,94,	0,3555,14688,
#Partially deleted in new
chr12	15882390	15903442	chr12:15882390-15903442	0	+	15882713	15889962	789624	9	429,82,73,97,138,137,150,66,526,	0,7537,8206,11656,12968,15491,17513,18556,20526,
#Partially deleted in new
chr12	15882393	15903014	chr12:15882393-15903014	1	+	15882707	15902978	789624	11	426,39,136,82,73,97,138,137,150,66,98,	0,689,1147,7534,8203,11653,12965,15488,17510,18553,20523,
#Partially deleted in new
chr12	15882394	15903478	chr12:15882394-15903478	3	+	15882707	15902978	789624	10	425,136,82,73,97,138,137,150,66,562,	0,1146,7533,8202,11652,12964,15487,17509,18552,20522,
#Partially deleted in new
chr12	15895453	15898272	chr12:15895453-15898272	0	+	15895453	15895453	8553170	2	43,391,	0,2428,
#Partially deleted in new
chr12	15897944	15903340	chr12:15897944-15903340	0	+	15897944	15902978	789624	3	74,150,424,	0,1959,4972,
#Partially deleted in new
chr12	15900898	15903478	chr12:15900898-15903478	0	+	15900898	15900898	8553170	2	114,562,	0,2018,
#Partially deleted in new
chr12	15911171	16037282	chr12:15911171-16037282	3	+	15911383	16036746	789624	9	243,98,148,96,135,129,113,150,593,	0,45764,47016,48657,51641,71136,121370,125060,125518,
#Partially deleted in new
chr12	15911301	16036292	chr12:15911301-16036292	0	+	15911383	15959882	789624	7	113,98,96,135,129,113,61,	0,45634,48527,51511,71006,121240,124930,
#Partially deleted in new
chr12	15911328	15982358	chr12:15911328-15982358	0	+	15958322	15982358	789624	7	86,200,98,148,96,135,51,	0,4788,45607,46859,48500,51484,70979,
#Partially deleted in new
chr12	15911358	16032551	chr12:15911358-16032551	0	+	15911383	16032551	789624	8	56,63,98,148,96,135,129,10,	0,332,45577,46829,48470,51454,70949,121183,
#Partially deleted in new
chr12	15911362	16033048	chr12:15911362-16033048	0	+	15911383	15958311	789624	7	52,98,96,96,135,129,507,	0,45573,46877,48466,51450,70945,121179,
#Partially deleted in new
chr12	15911362	16036751	chr12:15911362-16036751	1	+	15911383	16036746	789624	8	52,98,148,96,135,113,150,62,	0,45573,46825,48466,51450,121179,124869,125327,
#Partially deleted in new
chr12	15951360	16032657	chr12:15951360-16032657	0	+	15958322	16032657	789624	7	97,98,148,96,135,129,116,	0,5575,6827,8468,11452,30947,81181,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	15956587	16037280	chr12:15956587-16037280	1	+	15958322	16036746	789624	9	159,98,148,96,135,129,113,150,591,	0,348,1600,3241,6225,25720,75954,79644,80102,
#Partially deleted in new
chr12	15962751	16036813	chr12:15962751-16036813	0	+	15962751	15962751	8553170	5	196,129,113,150,124,	0,19556,69790,73480,73938,
#Deleted in new
chr12	15971889	15972609	chr12:15971889-15972609	7	-	15971889	15971889	16724991	1	720,	0,
#Partially deleted in new
chr12	15985171	16036340	chr12:15985171-16036340	0	+	15985171	15985171	8553170	3	165,113,109,	0,47370,51060,
#Partially deleted in new
chr12	16188484	16277685	chr12:16188484-16277685	3	-	16189667	16277685	789624	9	1331,109,132,189,187,221,170,223,361,	0,5860,28408,35929,51196,56095,69216,84076,88840,
#Partially deleted in new
chr12	16347141	16364409	chr12:16347141-16364409	3	+	16354252	16364041	789624	4	43,148,95,615,	0,7089,10463,16653,
#Partially deleted in new
chr12	16347141	16363806	chr12:16347141-16363806	0	+	16354252	16363806	789624	4	43,148,95,12,	0,7089,10463,16653,
#Deleted in new
chr12	16347644	16349106	chr12:16347644-16349106	0	+	16347644	16347644	8553170	2	66,213,	0,1249,
#Partially deleted in new
chr12	16347644	16363999	chr12:16347644-16363999	0	+	16354252	16363999	789624	4	66,40,95,205,	0,6586,9960,16150,
#Partially deleted in new
chr12	16347648	16364403	chr12:16347648-16364403	1	+	16354252	16364041	789624	4	62,148,95,609,	0,6582,9956,16146,
#Partially deleted in new
chr12	16347653	16354724	chr12:16347653-16354724	0	+	16347653	16347653	8553170	2	57,494,	0,6577,
#Partially deleted in new
chr12	16347653	16370408	chr12:16347653-16370408	0	+	16347653	16347653	8553170	4	57,95,141,640,	0,9951,19671,22115,
#Partially deleted in new
chr12	16347663	16364060	chr12:16347663-16364060	0	+	16347663	16347663	8553170	5	47,148,95,144,266,	0,6567,9941,12636,16131,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	16347693	16377192	chr12:16347693-16377192	1	+	16354252	16376164	789624	4	17,148,95,1071,	0,6537,9911,28428,
#Partially deleted in new
chr12	16347777	16364409	chr12:16347777-16364409	1	+	16354252	16364041	789624	4	121,148,95,615,	0,6453,9827,16017,
#Partially deleted in new
chr12	16347777	16364071	chr12:16347777-16364071	1	+	16354252	16363809	789624	3	121,148,277,	0,6453,16017,
#Partially deleted in new
chr12	16347796	16363814	chr12:16347796-16363814	0	+	16354252	16363814	789624	4	102,148,95,20,	0,6434,9808,15998,
#Partially deleted in new
chr12	16350745	16354378	chr12:16350745-16354378	0	+	16354252	16354378	789624	2	54,148,	0,3485,
#Partially deleted in new
chr12	16353416	16364409	chr12:16353416-16364409	1	+	16354252	16364041	789624	4	51,148,95,615,	0,814,4188,10378,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	16357510	16364260	chr12:16357510-16364260	0	+	16357510	16357510	8553170	2	189,466,	0,6284,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	16362567	16364409	chr12:16362567-16364409	0	+	16362567	16362567	8553170	1	1842,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	16382826	16438761	chr12:16382826-16438761	0	+	16382826	16382826	8553170	2	778,1374,	0,54561,
#Deleted in new
chr12	16399273	16402406	chr12:16399273-16402406	7	-	16399273	16399273	16724991	1	3133,	0,
#Deleted in new
chr12	16513444	16514371	chr12:16513444-16514371	7	+	16513444	16513444	16724991	1	927,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	16548372	16605379	chr12:16548372-16605379	1	-	16551221	16604889	789624	4	2955,126,214,515,	0,12040,52282,56492,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	16548372	16608214	chr12:16548372-16608214	1	-	16551221	16600860	789624	4	2955,126,214,279,	0,12040,52282,59563,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	16548372	16605970	chr12:16548372-16605970	3	-	16551221	16605813	789624	4	2955,126,214,203,	0,12040,52282,57395,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	16548372	16600860	chr12:16548372-16600860	1	-	16551221	16600860	789624	4	2955,126,8,138,	0,12040,52341,52350,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	16548419	16608135	chr12:16548419-16608135	1	-	16551221	16600860	789624	5	2908,126,214,67,200,	0,11993,52235,57646,59516,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	16548420	16606800	chr12:16548420-16606800	1	-	16551221	16600860	789624	5	2907,126,214,67,51,	0,11992,52234,57645,58329,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	16548423	16605379	chr12:16548423-16605379	1	-	16551221	16600860	789624	4	2904,126,214,515,	0,11989,52231,56441,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	16548423	16608104	chr12:16548423-16608104	0	-	16600650	16600860	789624	5	2904,126,268,67,169,	0,11989,52177,57642,59512,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	16549374	16606440	chr12:16549374-16606440	0	-	16560502	16600860	789624	5	1953,126,155,67,102,	0,11038,51339,56691,56964,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	16550198	16610526	chr12:16550198-16610526	1	-	16551221	16600860	789624	5	1129,126,214,67,38,	0,10214,50456,55867,60290,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	16550201	16608027	chr12:16550201-16608027	0	-	16560502	16600860	789624	4	1126,126,155,92,	0,10211,50512,57734,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	16550382	16605970	chr12:16550382-16605970	1	-	16551221	16600860	789624	4	945,126,214,203,	0,10030,50272,55385,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	16550448	16606531	chr12:16550448-16606531	1	-	16551221	16600860	789624	4	879,126,214,466,	0,9964,50206,55617,
#Partially deleted in new
chr12	16550809	16607006	chr12:16550809-16607006	0	-	16598894	16600860	789624	7	518,126,198,176,214,67,190,	0,9603,43327,47982,49845,55256,56007,
#Partially deleted in new
chr12	16550874	16609889	chr12:16550874-16609889	1	-	16551221	16600860	789624	5	453,126,214,67,156,	0,9538,49780,55191,58859,
#Partially deleted in new
chr12	16550967	16609824	chr12:16550967-16609824	0	-	16594254	16600860	789624	6	360,126,125,214,67,91,	0,9445,43169,49687,55098,58766,
#Partially deleted in new
chr12	16551044	16607150	chr12:16551044-16607150	1	-	16551221	16600860	789624	6	283,126,125,155,67,150,	0,9368,43092,49669,55021,55956,
#Partially deleted in new
chr12	16551181	16610594	chr12:16551181-16610594	1	-	16551221	16600860	789624	4	146,126,214,87,	0,9231,49473,59326,
#Partially deleted in new
chr12	16551227	16607185	chr12:16551227-16607185	0	-	16560502	16600860	789624	5	100,126,155,67,139,	0,9185,49486,54838,55819,
#Partially deleted in new
chr12	16551231	16608000	chr12:16551231-16608000	0	-	16600650	16600860	789624	4	96,126,268,65,	0,9181,49369,56704,
#Partially deleted in new
chr12	16551303	16607389	chr12:16551303-16607389	0	-	16551303	16600860	789624	5	24,126,214,67,85,	0,9109,49351,54762,56001,
#Partially deleted in new
chr12	16551303	16602196	chr12:16551303-16602196	0	-	16551303	16600860	789624	4	24,126,214,179,	0,9109,49351,50714,
#Partially deleted in new
chr12	16551303	16607355	chr12:16551303-16607355	0	-	16551303	16600860	789624	5	24,126,214,67,65,	0,9109,49351,54762,55987,
#Partially deleted in new
chr12	16551317	16605913	chr12:16551317-16605913	0	-	16560502	16600860	789624	4	10,126,155,289,	0,9095,49396,54307,
#Partially deleted in new
chr12	16560412	16608726	chr12:16560412-16608726	0	-	16560412	16600860	789624	4	126,214,67,183,	0,40242,45653,48131,
#Partially deleted in new
chr12	16560452	16608214	chr12:16560452-16608214	0	-	16560452	16600860	789624	3	86,214,279,	0,40202,47483,
#Partially deleted in new
chr12	16560474	16607924	chr12:16560474-16607924	0	-	16560474	16560474	8553170	4	64,155,67,264,	0,40239,45591,47186,
#Partially deleted in new
chr12	16560480	16604849	chr12:16560480-16604849	0	-	16560480	16600860	789624	3	58,214,258,	0,40174,44111,
#Partially deleted in new
chr12	16560491	16610037	chr12:16560491-16610037	0	-	16560491	16600860	789624	3	47,214,304,	0,40163,49242,
#Partially deleted in new
chr12	16560505	16610094	chr12:16560505-16610094	0	-	16560505	16560505	8553170	3	33,155,361,	0,40208,49228,
#Partially deleted in new
chr12	16567410	16573940	chr12:16567410-16573940	3	+	16567410	16567410	8553170	2	173,430,	0,6100,
#Partially deleted in new
chr12	16594251	16610089	chr12:16594251-16610089	0	-	16594251	16594251	8553170	3	83,155,356,	0,6462,15482,
#Partially deleted in new
chr12	16597615	16607122	chr12:16597615-16607122	0	-	16597615	16597615	8553170	3	3253,67,306,	0,8450,9201,
#Partially deleted in new
chr12	16598874	16608088	chr12:16598874-16608088	0	-	16598874	16598874	8553170	3	93,214,153,	0,1780,9061,
#Partially deleted in new
chr12	16600016	16605056	chr12:16600016-16605056	0	-	16600016	16600016	8553170	2	852,192,	0,4848,
#Partially deleted in new
chr12	16600685	16602293	chr12:16600685-16602293	0	-	16600685	16600860	789624	2	183,439,	0,1169,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	16693799	16695977	chr12:16693799-16695977	3	+	16693799	16693799	8553170	1	2178,	0,
#Partially deleted in new
chr12	16989125	16989936	chr12:16989125-16989936	7	+	16989125	16989125	16724991	2	438,61,	0,750,
#Deleted in new
chr12	16990669	16992083	chr12:16990669-16992083	7	+	16990669	16990669	16724991	1	1414,	0,
#Deleted in new
chr12	17071397	17071505	chr12:17071397-17071505	3	-	17071397	17071397	8553170	1	108,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	17083530	17167790	chr12:17083530-17167790	3	-	17083530	17083530	8553170	7	778,103,125,381,118,43,131,	0,45461,63335,75888,81495,82928,84129,
#Deleted in new
chr12	17121715	17122460	chr12:17121715-17122460	7	+	17121715	17121715	16724991	1	745,	0,
#Deleted in new
chr12	17383351	17384647	chr12:17383351-17384647	7	-	17383351	17383351	16724991	1	1296,	0,
#Deleted in new
chr12	17400398	17400914	chr12:17400398-17400914	7	+	17400398	17400398	16724991	1	516,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	17509352	17589992	chr12:17509352-17589992	3	-	17509352	17509352	8553170	8	115,125,118,141,65,55,97,287,	0,43414,72466,74870,75105,76878,79641,80353,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	17589256	17615463	chr12:17589256-17615463	3	+	17589256	17589256	8553170	2	127,333,	0,25874,
#Deleted in new
chr12	17673298	17673394	chr12:17673298-17673394	3	+	17673298	17673298	5263520	1	96,	0,
#Partially deleted in new
chr12	18080868	18090193	chr12:18080868-18090193	1	-	18081190	18089283	789624	6	605,149,74,57,157,105,	0,3648,4751,8031,8360,9220,
#Partially deleted in new
chr12	18080881	18090189	chr12:18080881-18090189	3	-	18081190	18090140	789624	5	592,149,74,57,101,	0,3635,4738,8018,9207,
#Duplicated in new
chr12	18081217	18202070	chr12:18081217-18202070	0	-	18081217	18081217	8553170	5	256,149,74,57,61,	0,3299,4402,7682,120792,
#Partially deleted in new
chr12	18081336	18090141	chr12:18081336-18090141	1	-	18084556	18090140	789624	5	137,46,74,57,53,	0,3180,4283,7563,8752,
#Partially deleted in new
chr12	18081363	18320107	chr12:18081363-18320107	0	-	18081363	18081363	8553170	8	110,149,74,57,82,110,97,52,	0,3153,4256,7536,59428,61820,203941,238692,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	18247613	18363088	chr12:18247613-18363088	1	+	18282081	18362890	789624	12	469,756,83,158,115,103,71,64,123,34,196,325,	0,34390,39233,43241,46287,66348,73348,77421,90812,95713,99027,115150,
#Partially deleted in new
chr12	18261539	18648414	chr12:18261539-18648414	3	+	18282081	18648028	0	32	38,756,83,158,115,103,71,64,123,34,196,132,115,131,189,94,95,181,108,93,130,137,170,157,110,190,122,109,76,95,126,539,	0,20464,25307,29315,32361,52422,59422,63495,76886,81787,85101,109640,120226,129582,138119,159401,162405,226909,229911,234522,236079,241741,243752,276616,284783,301163,301837,305409,332954,347995,378889,386336,
#Partially deleted in new
chr12	18261539	18648414	chr12:18261539-18648414	1	+	18282081	18648028	789624	33	38,756,83,158,115,103,71,64,123,34,196,123,132,115,131,189,94,95,181,108,93,130,137,170,157,110,190,122,109,76,95,126,539,	0,20464,25307,29315,32361,52422,59422,63495,76886,81787,85101,101224,109640,120226,129582,138119,159401,162405,226909,229911,234522,236079,241741,243752,276616,284783,301163,301837,305409,332954,347995,378889,386336,
#Partially deleted in new
chr12	18282043	18648416	chr12:18282043-18648416	1	+	18282081	18648028	0	31	716,83,158,115,103,71,64,123,34,196,132,115,131,189,94,95,181,108,93,130,137,170,157,110,190,122,109,76,95,126,541,	0,4803,8811,11857,31918,38918,42991,56382,61283,64597,89136,99722,109078,117615,138897,141901,206405,209407,214018,215575,221237,223248,256112,264279,280659,281333,284905,312450,327491,358385,365832,
#Partially deleted in new
chr12	18282043	18648095	chr12:18282043-18648095	0	+	18282081	18286871	789624	32	716,76,158,115,103,71,64,123,34,196,123,132,115,131,189,94,95,181,108,93,130,137,170,157,110,190,122,109,76,95,126,220,	0,4810,8811,11857,31918,38918,42991,56382,61283,64597,80720,89136,99722,109078,117615,138897,141901,206405,209407,214018,215575,221237,223248,256112,264279,280659,281333,284905,312450,327491,358385,365832,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	18282706	18314638	chr12:18282706-18314638	0	+	18282706	18314576	789624	6	53,83,158,115,103,113,	0,4140,8148,11194,31255,31819,
#Deleted in new
chr12	18358442	18358967	chr12:18358442-18358967	7	-	18358442	18358442	16724991	1	525,	0,
#Deleted in new
chr12	18371180	18372715	chr12:18371180-18372715	0	+	18371180	18371180	8553170	2	131,176,	0,1359,
#Deleted in new
chr12	18424662	18425140	chr12:18424662-18425140	7	+	18424662	18424662	16724991	1	478,	0,
#Deleted in new
chr12	18493050	18493723	chr12:18493050-18493723	7	+	18493050	18493050	16724991	1	673,	0,
#Partially deleted in new
chr12	18683168	18695078	chr12:18683168-18695078	0	-	18683238	18695078	789624	3	156,49,169,	0,5001,11741,
#Partially deleted in new
chr12	18683175	18738100	chr12:18683175-18738100	1	-	18683238	18737371	8553170	14	149,150,130,170,117,157,276,150,145,202,232,124,149,169,	0,954,4913,11734,12974,16618,18325,21990,29666,36255,40135,53045,54185,54756,
#Partially deleted in new
chr12	18683177	18738015	chr12:18683177-18738015	0	-	18723542	18737371	789624	15	147,150,130,170,117,157,68,85,150,145,202,235,124,149,84,	0,952,4911,11732,12972,16616,18323,18514,21988,29664,36253,40133,53043,54183,54754,
#Partially deleted in new
chr12	18683181	18738057	chr12:18683181-18738057	3	-	18683238	18737371	789624	15	143,150,130,170,117,157,68,85,150,145,202,232,124,149,126,	0,948,4907,11728,12968,16612,18319,18510,21984,29660,36249,40129,53039,54179,54750,
#Partially deleted in new
chr12	18683181	18695037	chr12:18683181-18695037	1	-	18683238	18688122	789624	4	143,150,130,102,	0,948,4907,11754,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	18683181	18714771	chr12:18683181-18714771	1	-	18683238	18705252	789624	11	143,150,130,170,117,157,276,119,145,89,116,	0,948,4907,11728,12968,16612,18319,21984,29660,30555,31474,
#Partially deleted in new
chr12	18683181	18719613	chr12:18683181-18719613	0	-	18685626	18719613	789624	12	143,150,169,130,170,117,157,68,85,150,145,183,	0,948,2308,4907,11728,12968,16612,18319,18510,21984,29660,36249,
#Partially deleted in new
chr12	18683181	18695044	chr12:18683181-18695044	0	-	18683596	18695044	789624	5	143,88,150,130,135,	0,362,948,4907,11728,
#Partially deleted in new
chr12	18683186	18737469	chr12:18683186-18737469	1	-	18683238	18737371	789624	11	138,150,130,170,117,157,68,85,150,124,109,	0,943,4902,11723,12963,16607,18314,18505,21979,53034,54174,
#Partially deleted in new
chr12	18688087	18712910	chr12:18688087-18712910	0	-	18688087	18712910	789624	7	131,170,117,157,68,85,69,	0,6822,8062,11706,13413,13604,24754,
#Deleted in new
chr12	18692761	18694096	chr12:18692761-18694096	7	+	18692761	18692761	16724991	1	1335,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	18696149	18714747	chr12:18696149-18714747	0	-	18696149	18696149	8553170	7	117,157,68,85,150,145,92,	0,3644,5351,5542,9016,16692,18506,
#Partially deleted in new
chr12	18696190	18701590	chr12:18696190-18701590	0	-	18696190	18696190	8553170	3	76,157,90,	0,3603,5310,
#Partially deleted in new
chr12	18699796	18738012	chr12:18699796-18738012	0	-	18699796	18705252	789624	7	154,68,85,150,108,127,81,	0,1704,1895,5369,36424,37586,38135,
#Partially deleted in new
chr12	18701500	18738012	chr12:18701500-18738012	0	-	18701500	18737435	789624	7	68,85,150,108,56,105,81,	0,191,3665,34720,35192,35904,36431,
#Partially deleted in new
chr12	18712883	18738026	chr12:18712883-18738026	0	-	18723542	18737371	789624	7	103,89,202,235,124,149,95,	0,853,6547,10427,23337,24477,25048,
#Partially deleted in new
chr12	18712898	18738055	chr12:18712898-18738055	0	-	18712898	18712898	8553170	5	88,89,124,149,124,	0,838,23322,24462,25033,
#Partially deleted in new
chr12	18712913	18738012	chr12:18712913-18738012	0	-	18719605	18737371	789624	5	73,202,124,149,78,	0,6517,23307,24447,25021,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	18714794	18737878	chr12:18714794-18737878	3	+	18714794	18714794	8553170	3	93,114,365,	0,891,22719,
#Partially deleted in new
chr12	18719458	18738012	chr12:18719458-18738012	0	-	18719458	18723365	789624	5	174,232,108,127,81,	0,3852,16762,17924,18473,
#Partially deleted in new
chr12	18723457	18738039	chr12:18723457-18738039	0	-	18723457	18723457	8553170	5	88,125,108,127,108,	0,7536,12763,13925,14474,
#Deleted in new
chr12	18735763	18738012	chr12:18735763-18738012	0	-	18735763	18735763	8553170	3	581,149,81,	0,1597,2168,
#Deleted in new
chr12	18738100	18739187	chr12:18738100-18739187	3	+	18738268	18739168	789624	1	1087,	0,
#Deleted in new
chr12	19089150	19089888	chr12:19089150-19089888	7	+	19089150	19089150	16724991	1	738,	0,
#Deleted in new
chr12	19107853	19108183	chr12:19107853-19108183	7	-	19107853	19107853	16724991	1	330,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	19129751	19202003	chr12:19129751-19202003	1	+	19129799	19200328	0	4	137,80,58,1679,	0,299,2641,70573,
#Partially deleted in new
chr12	19129767	19376400	chr12:19129767-19376400	1	+	19129799	19369787	0	32	121,80,58,84,121,105,73,101,116,18,468,466,84,120,54,81,36,63,81,150,102,112,47,189,121,119,210,135,125,146,106,870,	0,283,2625,124172,125277,127665,131181,135982,140002,140420,144748,153512,157705,160909,161876,185046,190253,190794,192542,192750,206747,213555,216074,217226,218631,224116,228460,229644,231814,236196,239925,245763,
#Partially deleted in new
chr12	19129793	19376400	chr12:19129793-19376400	3	+	19129799	19369787	0	26	95,80,58,84,121,105,73,101,116,468,466,84,63,81,150,102,112,47,121,119,210,135,125,146,106,870,	0,257,2599,124146,125251,127639,131155,135956,139976,144722,153486,157679,190768,192516,192724,206721,213529,216048,218605,224090,228434,229618,231788,236170,239899,245737,
#Partially deleted in new
chr12	19129793	19375592	chr12:19129793-19375592	1	+	19269784	19369787	789624	25	95,80,58,84,121,105,101,116,468,466,84,63,81,150,102,112,47,121,119,210,135,125,146,106,62,	0,257,2599,124146,125251,127639,135956,139976,144722,153486,157679,190768,192516,192724,206721,213529,216048,218605,224090,228434,229618,231788,236170,239899,245737,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr12	19129795	19373668	chr12:19129795-19373668	1	+	19129799	19369787	0	28	93,80,58,84,121,105,73,101,116,468,466,84,120,54,63,81,150,102,112,47,121,119,210,135,125,146,106,2947,	0,255,2597,124144,125249,127637,131153,135954,139974,144720,153484,157677,160881,161848,190766,192514,192722,206719,213527,216046,218603,224088,228432,229616,231786,236168,239897,240926,
#Partially deleted in new
chr12	19130059	19207733	chr12:19130059-19207733	0	+	19130059	19130059	8553170	3	71,58,468,	0,2333,77206,
#Partially deleted in new
chr12	19130709	19257443	chr12:19130709-19257443	0	+	19130709	19130709	8553170	5	179,58,84,121,11,	0,1683,123230,124335,126723,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	19147073	19154659	chr12:19147073-19154659	3	+	19147073	19147073	8553170	2	207,5184,	0,2402,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	19176287	19176589	chr12:19176287-19176589	3	-	19176287	19176287	8553170	1	302,	0,
#Partially deleted in new
chr12	19205261	19265817	chr12:19205261-19265817	0	+	19255057	19265817	789624	6	182,84,121,105,73,68,	0,48678,49783,52171,55687,60488,
#Partially deleted in new
chr12	19205324	19376397	chr12:19205324-19376397	1	+	19255057	19369787	0	26	119,84,121,105,73,101,116,468,466,84,81,63,81,150,102,112,47,189,121,119,210,135,125,146,106,867,	0,48615,49720,52108,55624,60425,64445,69191,77955,82148,109489,115237,116985,117193,131190,137998,140517,141669,143074,148559,152903,154087,156257,160639,164368,170206,
#Partially deleted in new
chr12	19236923	19361662	chr12:19236923-19361662	0	+	19255057	19361662	789624	22	111,84,121,105,73,101,116,468,466,84,63,81,150,102,112,47,189,121,119,210,135,81,	0,17016,18121,20509,24025,28826,32846,37592,46356,50549,83638,85386,85594,99591,106399,108918,110070,111475,116960,121304,122488,124658,
#Partially deleted in new
chr12	19236940	19254009	chr12:19236940-19254009	0	+	19236940	19236940	8553170	3	94,264,70,	0,6239,16999,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	19257473	19307560	chr12:19257473-19307560	0	+	19257473	19257473	8553170	8	64,73,101,116,468,466,84,1162,	0,3475,8276,12296,17042,25806,29999,48925,
#Partially deleted in new
chr12	19283636	19320585	chr12:19283636-19320585	0	+	19283636	19314803	789624	7	109,84,120,54,130,36,24,	0,3836,7040,8007,31128,36384,36925,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	19303479	19303775	chr12:19303479-19303775	3	+	19303479	19303479	8553170	1	296,	0,
#Partially deleted in new
chr12	19319645	19343416	chr12:19319645-19343416	0	+	19319645	19319645	8553170	6	411,63,81,150,102,94,	0,916,2664,2872,16869,23677,
#Partially deleted in new
chr12	19322517	19376397	chr12:19322517-19376397	0	+	19322517	19369787	789624	10	150,102,112,119,210,135,125,146,106,867,	0,13997,20805,31366,35710,36894,39064,43446,47175,53013,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	19404065	19518192	chr12:19404065-19518192	1	+	19462525	19518117	789624	8	59,208,108,187,125,68,114,106,	0,58444,69182,89734,96031,108332,110605,114021,
#Deleted in new
chr12	19413152	19413461	chr12:19413152-19413461	7	+	19413152	19413152	16724991	1	309,	0,
#Partially deleted in new
chr12	19418926	19419161	chr12:19418926-19419161	7	-	19418926	19418926	16724991	1	235,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	19439673	19522239	chr12:19439673-19522239	3	+	19439699	19518720	0	9	697,208,108,187,125,68,114,27,3565,	0,22836,33574,54126,60423,72724,74997,78413,79001,
#Partially deleted in new
chr12	19439698	19520224	chr12:19439698-19520224	1	+	19439699	19518117	0	8	672,208,108,187,125,68,114,2138,	0,22811,33549,54101,60398,72699,74972,78388,
#Partially deleted in new
chr12	19440580	19520223	chr12:19440580-19520223	1	+	19440704	19518720	0	9	147,208,108,187,125,68,114,27,1549,	0,21929,32667,53219,59516,71817,74090,77506,78094,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	19445948	19446055	chr12:19445948-19446055	3	-	19445948	19445948	8553170	1	107,	0,
#Deleted in new
chr12	19456243	19457648	chr12:19456243-19457648	7	-	19456243	19456243	16724991	1	1405,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	19500092	19720801	chr12:19500092-19720801	0	+	19500092	19720687	789624	5	129,68,114,27,169,	0,12305,14578,17994,220540,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	19500128	19553272	chr12:19500128-19553272	0	+	19500128	19552973	789624	5	93,68,114,27,420,	0,12269,14542,17958,52724,
#Deleted in new
chr12	19508903	19509245	chr12:19508903-19509245	7	+	19508903	19508903	16724991	1	342,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	19724434	19724599	chr12:19724434-19724599	3	+	19724434	19724434	8553170	1	165,	0,
#Deleted in new
chr12	19941520	19943018	chr12:19941520-19943018	7	+	19941520	19941520	16724991	1	1498,	0,
#Partially deleted in new
chr12	20120979	20129813	chr12:20120979-20129813	3	-	20120979	20120979	8553170	5	179,55,97,143,159,	0,3465,4759,6836,8675,
#Partially deleted in new
chr12	20361731	20370262	chr12:20361731-20370262	3	-	20361731	20361731	8553170	2	103,422,	0,8109,
#Partially deleted in new
chr12	20369244	20684381	chr12:20369244-20684381	3	+	20369284	20680271	0	16	1000,51,258,155,116,220,86,155,138,112,114,200,204,156,259,4352,	0,187415,244198,246985,252051,260663,264448,265657,267855,270601,277245,277506,279443,281200,284702,310785,
#Partially deleted in new
chr12	20370124	20557224	chr12:20370124-20557224	0	+	20370124	20370124	8553170	2	120,565,	0,186535,
#Deleted in new
chr12	20449654	20450083	chr12:20449654-20450083	7	-	20449654	20449654	16724991	1	429,	0,
#Deleted in new
chr12	20551589	20553012	chr12:20551589-20553012	7	+	20551589	20551589	16724991	1	1423,	0,
#Partially deleted in new
chr12	20571863	20680517	chr12:20571863-20680517	0	+	20571863	20571863	8553170	15	308,258,155,116,220,86,155,138,112,114,200,204,156,259,488,	0,41579,44366,49432,58044,61829,63038,65236,67982,74626,74887,76824,78581,82083,108166,
#Deleted in new
chr12	20695354	20696975	chr12:20695354-20696975	0	+	20695354	20695354	8553170	3	258,72,227,	0,381,1394,
#Partially deleted in new
chr12	20695430	20752696	chr12:20695430-20752696	0	+	20699576	20711397	789624	14	182,72,154,125,147,99,246,165,196,166,185,65,221,391,	0,305,4121,15955,19708,21701,26373,27659,37478,41676,44753,47874,55244,56875,
#Partially deleted in new
chr12	20695461	20752817	chr12:20695461-20752817	1	+	20699576	20752528	789624	15	151,72,154,142,133,125,99,246,165,196,166,185,65,118,512,	0,274,4090,5856,10487,15924,21670,26342,27628,37447,41645,44722,47843,55213,56844,
#Partially deleted in new
chr12	20695464	20753386	chr12:20695464-20753386	3	+	20699576	20752528	789624	15	343,154,142,133,125,147,99,246,165,196,166,185,65,118,1081,	0,4087,5853,10484,15921,19674,21667,26339,27625,37444,41642,44719,47840,55210,56841,
#Partially deleted in new
chr12	20695479	20752613	chr12:20695479-20752613	1	+	20699576	20752479	789624	16	133,72,154,142,133,125,147,99,246,165,196,166,185,65,221,308,	0,256,4072,5838,10469,15906,19659,21652,26324,27610,37429,41627,44704,47825,55195,56826,
#Deleted in new
chr12	20695560	20700239	chr12:20695560-20700239	0	+	20695560	20695560	8553170	3	52,72,688,	0,175,3991,
#Deleted in new
chr12	20695570	20697496	chr12:20695570-20697496	0	+	20695570	20695570	8553170	3	42,72,666,	0,165,1260,
#Partially deleted in new
chr12	20695596	20753214	chr12:20695596-20753214	1	+	20706031	20752479	789624	13	211,133,125,147,99,246,165,196,166,185,65,221,909,	0,10352,15789,19542,21535,26207,27493,37312,41510,44587,47708,55078,56709,
#Deleted in new
chr12	20695749	20696943	chr12:20695749-20696943	0	+	20695749	20695749	8553170	2	58,113,	0,1081,
#Partially deleted in new
chr12	20810701	20875381	chr12:20810701-20875381	0	+	20815738	20875381	789624	8	63,149,142,133,122,147,99,147,	0,4972,44326,47737,50315,51710,52054,64533,
#Partially deleted in new
chr12	20810725	20916724	chr12:20810725-20916724	3	+	20815738	20916247	789624	16	39,115,149,142,133,122,147,99,243,165,196,166,185,65,118,721,	0,2798,4948,44302,47713,50291,51686,52030,64509,67046,68710,70129,72692,87710,90624,105278,
#Partially deleted in new
chr12	20815671	20916911	chr12:20815671-20916911	1	+	20815738	20916247	789624	14	151,142,133,122,147,99,243,165,196,166,185,65,118,908,	0,39356,42767,45345,46740,47084,59563,62100,63764,65183,67746,82764,85678,100332,
#Partially deleted in new
chr12	20815673	21090245	chr12:20815673-21090245	1	+	20815738	21090106	789624	14	149,142,133,122,147,99,243,165,196,166,185,65,118,338,	0,39354,42765,205787,207176,207515,227660,231379,233038,236422,238778,251645,260778,274234,
#Partially deleted in new
chr12	20815673	21090245	chr12:20815673-21090245	3	+	20815738	21090106	789624	16	149,142,133,122,147,99,243,165,196,166,185,65,118,65,118,338,	0,39354,42765,45343,46738,47082,59561,62098,63762,65181,67744,82762,85676,251645,260778,274234,
#Deleted in new
chr12	20845064	20845260	chr12:20845064-20845260	7	+	20845064	20845064	16724991	1	196,	0,
#Partially deleted in new
chr12	20855091	20861054	chr12:20855091-20861054	0	+	20855091	20855091	8553170	4	78,133,90,38,	0,3347,3794,5925,
#Partially deleted in new
chr12	20862458	20902333	chr12:20862458-20902333	0	+	20862458	20902002	789624	10	100,99,243,165,196,166,185,65,118,434,	0,297,12776,15313,16977,18396,20959,35977,38891,39441,
#Partially deleted in new
chr12	20962767	21090106	chr12:20962767-21090106	4	+	20962767	20962767	16724991	14	84,142,133,122,147,99,243,165,196,166,185,65,118,199,	0,52871,56480,58693,60082,60421,80566,84285,85944,89328,91684,104551,113684,127140,
#Partially deleted in new
chr12	21015695	21090106	chr12:21015695-21090106	3	+	21015695	21090106	789624	13	85,133,122,147,99,243,165,196,166,185,65,118,199,	0,3552,5765,7154,7493,27638,31357,33016,36400,38756,51623,60756,74212,
#Partially deleted in new
chr12	21047178	21176895	chr12:21047178-21176895	0	+	21047178	21141517	789624	6	39,58,65,118,145,120,	0,7400,20140,29273,94335,129597,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	21054568	21092745	chr12:21054568-21092745	0	+	21054568	21054568	8553170	5	68,65,118,22,233,	0,12750,21883,35339,37944,
#Partially deleted in new
chr12	21054586	21131236	chr12:21054586-21131236	2	+	21054586	21126143	789624	6	50,65,118,22,150,114,	0,12732,21865,35321,71521,76536,
#Partially deleted in new
chr12	21054589	21141623	chr12:21054589-21141623	0	+	21054589	21126157	789624	6	47,65,118,140,114,110,	0,12729,21862,71528,76533,86924,
#Partially deleted in new
chr12	21054593	21141623	chr12:21054593-21141623	1	+	21054593	21126117	789624	6	43,65,118,150,114,110,	0,12725,21858,71514,76529,86920,
#Partially deleted in new
chr12	21067318	21141623	chr12:21067318-21141623	0	+	21067318	21119610	789624	6	65,118,24,150,114,110,	0,9133,52285,58789,63804,74195,
#Partially deleted in new
chr12	21067350	21075784	chr12:21067350-21075784	0	+	21067350	21067350	8553170	2	33,525,	0,7909,
#Partially deleted in new
chr12	21131201	21239246	chr12:21131201-21239246	3	+	21141574	21239189	789624	15	35,145,142,133,122,147,99,243,165,196,166,185,65,118,268,	0,10312,41448,43375,45574,47374,47720,65744,69306,71289,74666,85917,91098,93520,107777,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	21264599	21395437	chr12:21264599-21395437	3	-	21269547	21334647	789624	16	5168,118,65,173,166,196,165,222,99,147,107,133,142,122,127,532,	0,9869,10760,27564,29345,30997,32804,35748,36571,39827,42282,49949,54182,69988,109799,130306,
#Partially deleted in new
chr12	21269337	21334671	chr12:21269337-21334671	0	-	21306902	21319425	789624	14	430,118,65,173,166,196,165,222,99,147,107,142,208,84,	0,5131,6022,22826,24607,26259,28066,31010,31833,35089,37544,49444,50034,65250,
#Partially deleted in new
chr12	21269413	21334900	chr12:21269413-21334900	1	-	21269547	21306927	789624	13	354,118,65,173,166,196,165,222,99,147,107,122,74,	0,5055,5946,22750,24531,26183,27990,30934,31757,35013,37468,65174,65413,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	21269458	21395261	chr12:21269458-21395261	0	-	21306902	21334647	789624	14	309,118,65,173,166,196,165,222,99,147,107,142,117,356,	0,5010,5901,22705,24486,26138,27945,30889,31712,34968,37423,49323,65129,125447,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	21273941	21324681	chr12:21273941-21324681	0	-	21273941	21273941	8553170	12	645,65,173,1848,165,222,99,147,107,133,142,88,	0,1418,18222,20003,23462,26406,27229,30485,32940,40607,44840,50652,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	21274902	21324736	chr12:21274902-21324736	0	-	21274902	21274902	8553170	13	522,173,166,196,165,222,99,147,107,133,142,208,143,	0,17261,19042,20694,22501,25445,26268,29524,31979,39646,43879,44469,49691,
#Partially deleted in new
chr12	21304522	21418016	chr12:21304522-21418016	0	-	21304522	21306927	789624	5	51,107,133,117,135,	0,2359,10026,30065,113359,
#Partially deleted in new
chr12	21306881	21334907	chr12:21306881-21334907	0	-	21306881	21334647	789624	5	107,133,142,117,81,	0,7667,11900,27706,27945,
#Partially deleted in new
chr12	21306913	21403663	chr12:21306913-21403663	0	-	21306913	21334647	789624	5	75,133,142,122,245,	0,7635,11868,27674,96505,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	21311626	21419594	chr12:21311626-21419594	0	-	21311626	21311626	8553170	5	132,142,117,64,418,	0,7155,22961,106255,107550,
#Partially deleted in new
chr12	21314584	21334913	chr12:21314584-21334913	0	-	21314584	21334647	789624	4	97,142,122,87,	0,4197,20003,20242,
#Partially deleted in new
chr12	21314610	21403657	chr12:21314610-21403657	0	-	21314610	21334647	789624	4	71,142,117,239,	0,4171,19977,88808,
#Partially deleted in new
chr12	21314663	21334895	chr12:21314663-21334895	0	-	21314663	21319425	789624	5	18,142,208,122,69,	0,4118,4708,19924,20163,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	21318830	21395397	chr12:21318830-21395397	0	-	21318830	21334647	789624	3	93,117,492,	0,15757,76075,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	21334642	21395397	chr12:21334642-21395397	0	-	21334642	21334647	8553170	2	67,492,	0,60263,
#Partially deleted in new
chr12	21354958	21378495	chr12:21354958-21378495	3	+	21373351	21378426	0	3	55,95,259,	0,18378,23278,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	21372883	21379978	chr12:21372883-21379978	1	+	21373351	21378426	0	3	121,95,1742,	0,453,5353,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	21372918	21379978	chr12:21372918-21379978	1	+	21373351	21378304	789624	4	86,95,92,1742,	0,418,723,5318,
#Partially deleted in new
chr12	21372927	21378395	chr12:21372927-21378395	0	+	21373351	21378395	789624	3	77,115,159,	0,389,5309,
#Partially deleted in new
chr12	21373406	21378629	chr12:21373406-21378629	0	+	21373406	21378426	789624	3	25,42,393,	0,2916,4830,
#Partially deleted in new
chr12	21437614	21462746	chr12:21437614-21462746	0	+	21437730	21455137	789624	9	200,81,120,129,161,101,130,118,7,	0,2753,7732,11948,17517,18380,23410,24393,25125,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	21437676	21471252	chr12:21437676-21471252	3	+	21437730	21468754	789624	12	138,81,120,129,74,161,101,130,113,123,138,2747,	0,2691,7670,11886,14404,17455,18318,23348,24331,25063,29804,30829,
#Partially deleted in new
chr12	21437704	21468770	chr12:21437704-21468770	0	+	21437730	21455137	789624	11	110,81,120,129,161,101,130,113,123,138,265,	0,2663,7642,11858,17427,18290,23320,24303,25035,29776,30801,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	21437914	21470350	chr12:21437914-21470350	1	+	21445394	21468754	789624	12	624,81,120,129,74,161,101,130,113,123,138,1845,	0,2453,7432,11648,14166,17217,18080,23110,24093,24825,29566,30591,
#Partially deleted in new
chr12	21447544	21448314	chr12:21447544-21448314	7	-	21447544	21447544	16724991	2	159,308,	0,462,
#Deleted in new
chr12	21454781	21456062	chr12:21454781-21456062	0	+	21454781	21454781	8553170	2	511,68,	0,1213,
#Partially deleted in new
chr12	21460902	21467589	chr12:21460902-21467589	0	+	21460902	21460902	8553170	4	252,118,123,109,	0,1105,1837,6578,
#Deleted in new
chr12	21467289	21468826	chr12:21467289-21468826	0	+	21467289	21467289	8553170	2	329,321,	0,1216,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	21468910	21501593	chr12:21468910-21501593	3	-	21470193	21499570	0	15	1436,130,220,92,139,118,149,82,167,199,107,180,198,61,424,	0,2058,2517,4640,5930,6557,6765,8000,8892,14465,17568,21288,22608,30644,32259,
#Partially deleted in new
chr12	21469801	21501551	chr12:21469801-21501551	1	-	21470193	21499570	0	16	545,130,220,92,139,118,149,82,167,199,107,180,198,61,46,139,	0,1167,1626,3749,5039,5666,5874,7109,8001,13574,16677,20397,21717,29753,31368,31611,
#Partially deleted in new
chr12	21483441	21501669	chr12:21483441-21501669	0	-	21483441	21499570	789624	7	133,107,180,198,61,46,207,	0,3037,6757,8077,16113,17728,18021,
#Partially deleted in new
chr12	21483476	21501669	chr12:21483476-21501669	0	-	21483476	21499570	789624	7	98,107,180,198,61,203,207,	0,3002,6722,8042,16078,17693,17986,
#Partially deleted in new
chr12	21490198	21501595	chr12:21490198-21501595	0	-	21490198	21499570	789624	5	180,198,61,46,115,	0,1320,9356,10971,11282,
#Partially deleted in new
chr12	21490273	21501663	chr12:21490273-21501663	0	-	21490273	21499570	789624	4	105,198,61,201,	0,1245,9281,11189,
#Partially deleted in new
chr12	21490302	21501655	chr12:21490302-21501655	0	-	21490302	21499570	789624	4	76,198,61,243,	0,1216,9252,11110,
#Partially deleted in new
chr12	21490374	21501593	chr12:21490374-21501593	0	-	21490374	21499570	789624	5	4,198,61,203,113,	0,1144,9180,10795,11106,
#Partially deleted in new
chr12	21501780	21516231	chr12:21501780-21516231	0	+	21501780	21501780	8553170	3	168,82,563,	0,10514,13888,
#Partially deleted in new
chr12	21501792	21516184	chr12:21501792-21516184	1	+	21508457	21515707	789624	4	156,179,82,516,	0,6590,10502,13876,
#Partially deleted in new
chr12	21501814	21518408	chr12:21501814-21518408	3	+	21501923	21515707	789624	5	134,92,179,82,2740,	0,5070,6568,10480,13854,
#Partially deleted in new
chr12	21501814	21516203	chr12:21501814-21516203	1	+	21501923	21515246	789624	6	134,92,179,82,33,535,	0,5070,6568,10480,13423,13854,
#Deleted in new
chr12	21501814	21507305	chr12:21501814-21507305	0	+	21501814	21501814	8553170	2	134,421,	0,5070,
#Partially deleted in new
chr12	21501816	21516062	chr12:21501816-21516062	0	+	21501816	21501816	8553170	4	132,92,82,394,	0,5068,10478,13852,
#Partially deleted in new
chr12	21501823	21515867	chr12:21501823-21515867	0	+	21501923	21507955	789624	7	125,92,166,179,82,33,199,	0,5061,6120,6559,10471,13414,13845,
#Partially deleted in new
chr12	21501828	21516239	chr12:21501828-21516239	0	+	21501923	21507955	789624	6	120,92,166,179,82,571,	0,5056,6115,6554,10466,13840,
#Deleted in new
chr12	21501829	21507955	chr12:21501829-21507955	1	+	21501923	21507955	789624	3	119,92,12,	0,5055,6114,
#Partially deleted in new
chr12	21501852	21515746	chr12:21501852-21515746	0	+	21501923	21507122	789624	6	96,92,35,179,82,78,	0,5032,5264,6530,10442,13816,
#Deleted in new
chr12	21526306	21532947	chr12:21526306-21532947	3	+	21526472	21531195	789624	6	172,81,58,63,84,1811,	0,579,828,1420,2694,4830,
#Deleted in new
chr12	21527043	21532523	chr12:21527043-21532523	1	+	21527170	21531195	8553170	4	149,63,84,1387,	0,683,1957,4093,
#Deleted in new
chr12	21527130	21531485	chr12:21527130-21531485	0	+	21527170	21529030	789624	4	62,63,80,349,	0,596,1874,4006,
#Deleted in new
chr12	21527300	21531524	chr12:21527300-21531524	0	+	21527300	21527300	8553170	4	27,63,84,388,	0,426,1700,3836,
#Deleted in new
chr12	21527434	21532523	chr12:21527434-21532523	0	+	21527434	21527434	789624	3	355,84,1387,	0,1566,3702,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	21527532	21541249	chr12:21527532-21541249	0	+	21527532	21527532	8553170	5	257,84,55,132,4204,	0,1468,3604,7447,9513,
#Deleted in new
chr12	21527935	21532523	chr12:21527935-21532523	0	+	21527935	21527935	789624	3	216,84,1387,	0,1065,3201,
#Partially deleted in new
chr12	21527951	21537377	chr12:21527951-21537377	0	+	21527951	21527951	8553170	5	200,84,55,132,332,	0,1049,3185,7028,9094,
#Partially deleted in new
chr12	21536188	21604847	chr12:21536188-21604847	3	-	21536953	21604592	789624	16	987,81,164,96,127,114,79,60,107,121,118,145,183,192,182,376,	0,3069,4221,6307,10155,22011,22902,23462,24197,26729,27039,32676,37955,39677,44153,68283,
#Partially deleted in new
chr12	21536202	21657798	chr12:21536202-21657798	3	-	21630783	21654671	8553170	23	973,81,164,96,127,114,79,60,107,121,118,145,183,192,182,132,124,118,174,174,118,135,48,	0,3055,4207,6293,10141,21997,22888,23448,24183,26715,27025,32662,37941,39663,44139,94458,100868,102150,105749,107732,110696,118340,121548,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	21556913	21635644	chr12:21556913-21635644	0	-	21556913	21556913	8553170	11	1400,79,60,107,121,118,145,183,134,182,106,	0,2177,2737,3472,6004,6314,11951,17230,18952,23428,78625,
#Partially deleted in new
chr12	21635341	21657842	chr12:21635341-21657842	3	-	21635541	21654671	0	8	368,124,118,174,174,118,135,92,	0,1729,3011,6610,8593,11557,19201,22409,
#Partially deleted in new
chr12	21635341	21657794	chr12:21635341-21657794	1	-	21635541	21654671	0	8	368,124,118,174,174,118,135,327,	0,1729,3011,6610,8593,11557,19201,22126,
#Partially deleted in new
chr12	21635341	21638538	chr12:21635341-21638538	0	-	21635341	21635341	8553170	3	368,124,186,	0,1729,3011,
#Partially deleted in new
chr12	21635341	21637374	chr12:21635341-21637374	0	-	21635341	21635341	8553170	2	368,304,	0,1729,
#Partially deleted in new
chr12	21638367	21657362	chr12:21638367-21657362	0	-	21638367	21654671	789624	6	103,174,174,118,135,40,	0,3584,5567,8531,16175,18955,
#Partially deleted in new
chr12	21643544	21654570	chr12:21643544-21654570	0	-	21643544	21643544	8553170	3	564,118,28,	0,3354,10998,
#Partially deleted in new
chr12	21643945	21657839	chr12:21643945-21657839	0	-	21643945	21654671	789624	5	163,118,135,227,89,	0,2953,10597,13042,13805,
#Partially deleted in new
chr12	21644049	21757857	chr12:21644049-21757857	0	-	21644049	21654671	789624	5	59,118,135,90,85,	0,2849,10493,93647,113723,
#Partially deleted in new
chr12	21654354	21657971	chr12:21654354-21657971	0	-	21654354	21654354	8553170	2	323,221,	0,3396,
#Partially deleted in new
chr12	21654656	21757831	chr12:21654656-21757831	0	-	21654656	21654656	8553170	4	21,85,87,59,	0,3094,83040,103116,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	21662312	21760032	chr12:21662312-21760032	3	+	21662312	21662312	8553170	2	459,119,	0,97601,
#Partially deleted in new
chr12	21759979	21766705	chr12:21759979-21766705	3	+	21759979	21759979	8553170	2	106,350,	0,6376,
#Partially deleted in new
chr12	21764954	21774821	chr12:21764954-21774821	3	-	21765722	21773616	789624	3	1669,444,276,	0,8288,9591,
#Deleted in new
chr12	21773274	21775581	chr12:21773274-21775581	0	-	21773274	21773616	789624	2	412,95,	0,2212,
#Boundary problem: need 38, got 0, diff 38, mapped 0.0
chr12	21797400	21936674	chr12:21797400-21936674	3	-	21801043	21936674	789624	38	3781,63,134,104,109,79,131,121,102,103,93,158,70,149,230,97,126,138,81,85,102,39,106,73,108,109,143,41,163,135,156,153,195,243,167,122,142,142,	0,8597,9945,12451,14648,17243,18362,19786,20749,31557,40677,44913,47082,47366,48202,50749,54696,54967,62185,63570,65552,67038,75224,78253,85365,90425,96631,97874,108725,110676,112756,113425,115471,118267,119536,128541,136381,139132,
#Partially deleted in new
chr12	21805173	21936674	chr12:21805173-21936674	1	-	21805173	21936674	789624	38	138,63,134,104,109,79,131,121,102,103,93,158,70,149,230,97,126,138,81,85,102,39,106,73,108,109,143,41,163,135,156,153,195,243,167,122,142,142,	0,824,2172,4678,6875,9470,10589,12013,12976,23784,32904,37140,39309,39593,40429,42976,46923,47194,54412,55797,57779,59265,67451,70480,77592,82652,88858,90101,100952,102903,104983,105652,107698,110494,111763,120768,128608,131359,
#Partially deleted in new
chr12	21805173	21910978	chr12:21805173-21910978	0	-	21805173	21910978	789624	31	138,63,134,104,109,79,131,121,102,103,93,158,70,149,230,97,126,138,81,85,102,39,106,73,109,143,41,163,135,156,153,	0,824,2172,4678,6875,9470,10589,12013,12976,23784,32904,37140,39309,39593,40429,42976,46923,47194,54412,55797,57779,59265,67451,70480,82652,88858,90101,100952,102903,104983,105652,
#Deleted in new
chr12	21828359	21828564	chr12:21828359-21828564	3	-	21828359	21828359	8553170	1	205,	0,
#Partially deleted in new
chr12	21922968	21941402	chr12:21922968-21941402	1	-	21923812	21936674	789624	7	888,122,142,162,60,116,203,	0,2973,10813,13564,15049,17741,18231,
#Partially deleted in new
chr12	21923463	21941233	chr12:21923463-21941233	1	-	21925452	21936674	789624	6	2096,122,142,162,116,34,	0,2478,10318,13069,17246,17736,
#Partially deleted in new
chr12	21923570	21942529	chr12:21923570-21942529	1	-	21923812	21936674	789624	6	286,122,142,162,116,195,	0,2371,10211,12962,17139,18764,
#Partially deleted in new
chr12	21923812	21936674	chr12:21923812-21936674	1	-	21923812	21936674	789624	4	44,122,142,142,	0,2129,9969,12720,
#Partially deleted in new
chr12	22008347	22008880	chr12:22008347-22008880	7	+	22008347	22008347	16724991	1	533,	0,
#Partially deleted in new
chr12	22046173	22065663	chr12:22046173-22065663	3	+	22046303	22065311	789624	8	390,143,156,134,95,172,154,543,	0,8975,9281,12393,14658,15107,16107,18947,
#Partially deleted in new
chr12	22046224	22065674	chr12:22046224-22065674	0	+	22046303	22062284	789624	7	339,143,156,134,95,154,554,	0,8924,9230,12342,14607,16056,18896,
#Partially deleted in new
chr12	22046286	22062434	chr12:22046286-22062434	0	+	22046303	22055461	789624	5	277,156,95,172,154,	0,9168,14545,14994,15994,
#Partially deleted in new
chr12	22055118	22060906	chr12:22055118-22060906	0	+	22055528	22060906	789624	4	173,156,134,75,	0,336,3448,5713,
#Deleted in new
chr12	22060641	22062413	chr12:22060641-22062413	0	+	22060641	22060641	8553170	3	285,172,133,	0,639,1639,
#Deleted in new
chr12	22104490	22105320	chr12:22104490-22105320	3	-	22104490	22104490	8553170	1	830,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	22107158	22118489	chr12:22107158-22118489	0	-	22107158	22107158	8553170	2	378,178,	0,11153,
#Partially deleted in new
chr12	22116628	22134851	chr12:22116628-22134851	7	-	22116628	22116628	16724991	5	176,86,127,187,43,	0,322,10000,13744,18180,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	22193390	22334714	chr12:22193390-22334714	3	-	22201551	22334232	789624	5	8648,93,110,145,718,	0,55615,61889,93758,140606,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	22195468	22195629	chr12:22195468-22195629	3	-	22195468	22195468	8553170	1	161,	0,
#Partially deleted in new
chr12	22200998	22334714	chr12:22200998-22334714	0	-	22249071	22334232	789624	4	1040,93,145,718,	0,48007,86150,132998,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	22201467	22268613	chr12:22201467-22268613	0	-	22201467	22201467	8553170	4	571,93,110,102,	0,47538,53812,67044,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	22201660	22268605	chr12:22201660-22268605	0	-	22201660	22201660	8553170	3	378,93,94,	0,47345,66851,
#Partially deleted in new
chr12	22201903	22336200	chr12:22201903-22336200	0	-	22201903	22336200	789624	5	135,93,110,145,89,	0,47102,53376,85245,134208,
#Partially deleted in new
chr12	22223271	22249046	chr12:22223271-22249046	0	-	22223739	22249046	789624	2	502,41,	0,25734,
#Partially deleted in new
chr12	22248825	22334163	chr12:22248825-22334163	0	-	22249001	22334163	789624	4	273,110,145,167,	0,6454,38323,85171,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	22324378	22334700	chr12:22324378-22334700	1	-	22325805	22334232	789624	3	1081,135,704,	0,1419,9618,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	22324411	22437041	chr12:22324411-22437041	0	-	22324411	22324411	8553170	4	1930,147,87,166,	0,29767,30285,112464,
#Partially deleted in new
chr12	22325098	22334671	chr12:22325098-22334671	1	-	22325443	22334232	789624	2	361,675,	0,8898,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	22354202	22376943	chr12:22354202-22376943	0	-	22354202	22354202	8553170	3	123,87,278,	0,494,22463,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	22395087	22398075	chr12:22395087-22398075	3	-	22395087	22395087	8553170	2	240,149,	0,2839,
#Partially deleted in new
chr12	22448582	22544546	chr12:22448582-22544546	1	-	22449759	22544150	789624	25	1309,147,191,87,88,90,99,62,64,141,165,187,192,96,115,109,86,152,199,156,96,172,87,119,227,	0,5313,8388,21126,22241,22816,23384,23703,24161,26168,29730,33974,36114,41540,44640,58128,64711,69403,74843,75889,77027,79138,86675,95478,95737,
#Partially deleted in new
chr12	22449544	22544409	chr12:22449544-22544409	1	-	22449759	22544150	789624	27	347,147,191,102,51,87,88,90,99,62,64,141,165,187,192,96,115,109,86,125,199,156,96,172,87,119,90,	0,4351,7426,8939,9947,20164,21279,21854,22422,22741,23199,25206,28768,33012,35152,40578,43678,57166,63749,69570,73881,74927,76065,78176,85713,94516,94775,
#Partially deleted in new
chr12	22449544	22544409	chr12:22449544-22544409	1	-	22449759	22544150	789624	27	347,147,191,102,51,87,88,90,99,62,64,141,165,187,192,96,115,109,86,152,199,156,96,172,87,119,90,	0,4351,7426,8939,9947,20164,21279,21854,22422,22741,23199,25206,28768,33012,35152,40578,43678,57166,63749,68441,73881,74927,76065,78176,85713,94516,94775,
#Partially deleted in new
chr12	22449544	22544409	chr12:22449544-22544409	3	-	22449759	22544150	789624	28	347,147,191,102,51,87,88,90,99,62,64,141,165,187,192,96,115,109,33,86,125,199,156,96,172,87,119,90,	0,4351,7426,8939,9947,20164,21279,21854,22422,22741,23199,25206,28768,33012,35152,40578,43678,57166,63102,63749,69570,73881,74927,76065,78176,85713,94516,94775,
#Partially deleted in new
chr12	22449580	22544253	chr12:22449580-22544253	1	-	22449759	22544150	789624	26	311,147,191,102,51,87,88,90,99,62,64,141,165,187,192,96,115,109,86,152,199,156,96,172,87,193,	0,4315,7390,8903,9911,20128,21243,21818,22386,22705,23163,25170,28732,32976,35116,40542,43642,57130,63713,68405,73845,74891,76029,78140,85677,94480,
#Partially deleted in new
chr12	22449655	22544492	chr12:22449655-22544492	1	-	22449759	22544150	789624	28	236,147,191,72,51,87,88,90,99,62,64,141,165,187,192,96,115,66,109,86,125,199,156,96,172,87,119,173,	0,4240,7315,8828,9836,20053,21168,21743,22311,22630,23088,25095,28657,32901,35041,40467,43567,53083,57055,63638,69459,73770,74816,75954,78065,85602,94405,94664,
#Partially deleted in new
chr12	22449814	22472305	chr12:22449814-22472305	0	-	22449814	22472305	789624	9	77,147,191,51,87,88,90,99,20,	0,4081,7156,9677,19894,21009,21584,22152,22471,
#Partially deleted in new
chr12	22456970	22458864	chr12:22456970-22458864	0	-	22456970	22456970	8553170	2	191,381,	0,1513,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	22460518	22463914	chr12:22460518-22463914	3	-	22460518	22460518	8553170	2	179,559,	0,2837,
#Deleted in new
chr12	22470835	22472445	chr12:22470835-22472445	0	-	22470835	22470835	8553170	4	76,90,99,160,	0,563,1131,1450,
#Partially deleted in new
chr12	22470896	22477338	chr12:22470896-22477338	0	-	22470896	22470896	8553170	7	15,90,99,62,64,141,77,	0,502,1070,1389,1847,3854,6365,
#Partially deleted in new
chr12	22478027	22544546	chr12:22478027-22544546	0	-	22478027	22478027	8553170	16	450,187,192,96,115,109,33,86,125,199,156,96,172,87,119,227,	0,4529,6669,12095,15195,28683,34619,35266,41087,45398,46444,47582,49693,57230,66033,66292,
#Partially deleted in new
chr12	22482561	22506967	chr12:22482561-22506967	0	-	22482561	22482561	8553170	5	182,192,96,115,257,	0,2135,7561,10661,24149,
#Partially deleted in new
chr12	22484337	22490182	chr12:22484337-22490182	0	-	22484337	22484337	8553170	2	551,60,	0,5785,
#Partially deleted in new
chr12	22484742	22506819	chr12:22484742-22506819	0	-	22484742	22484742	8553170	3	146,96,109,	0,5380,21968,
#Partially deleted in new
chr12	22484754	22524480	chr12:22484754-22524480	0	-	22493286	22524480	789624	7	134,96,115,86,152,199,9,	0,5368,8468,28539,33231,38671,39717,
#Partially deleted in new
chr12	22484794	22513324	chr12:22484794-22513324	0	-	22484794	22513324	789624	7	94,96,115,66,109,33,31,	0,5328,8428,17944,21916,27852,28499,
#Partially deleted in new
chr12	22518095	22525697	chr12:22518095-22525697	0	-	22518095	22518095	8553170	5	42,200,199,156,88,	0,944,5330,6376,7514,
#Partially deleted in new
chr12	22534706	22544189	chr12:22534706-22544189	0	-	22534706	22534706	8553170	2	638,129,	0,9354,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	22573424	22575105	chr12:22573424-22575105	7	+	22573424	22573424	16724991	3	99,147,669,	0,571,1012,
#Deleted in new
chr12	22596227	22596551	chr12:22596227-22596551	7	+	22596227	22596227	16724991	1	324,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	22601424	22618867	chr12:22601424-22618867	3	+	22601424	22601424	8553170	2	46,383,	0,17060,
#Partially deleted in new
chr12	22609227	22625015	chr12:22609227-22625015	3	-	22609227	22609227	8553170	2	527,335,	0,15453,
#Partially deleted in new
chr12	22625074	22690665	chr12:22625074-22690665	3	+	22625163	22684954	789624	8	512,260,141,143,84,161,74,5784,	0,18688,33939,35988,46197,48425,59408,59807,
#Partially deleted in new
chr12	22625140	22644587	chr12:22625140-22644587	1	+	22625163	22644304	789624	3	446,260,377,	0,18622,19070,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	22625191	22685223	chr12:22625191-22685223	0	+	22625191	22684516	789624	9	395,260,141,143,84,161,59,74,342,	0,18571,33822,35871,46080,48308,57089,59291,59690,
#Deleted in new
chr12	22625356	22626200	chr12:22625356-22626200	0	+	22625356	22625831	789624	2	230,387,	0,457,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	22638463	22638943	chr12:22638463-22638943	3	+	22638463	22638463	8553170	1	480,	0,
#Partially deleted in new
chr12	22643888	22661228	chr12:22643888-22661228	0	+	22643888	22643888	8553170	3	134,141,166,	0,15125,17174,
#Partially deleted in new
chr12	22671085	22684551	chr12:22671085-22684551	0	+	22671085	22671085	8553170	3	270,161,69,	0,2414,13397,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	22700027	22732240	chr12:22700027-22732240	1	+	22700027	22700027	8553170	3	67,62,502,	0,23914,31711,
#Deleted in new
chr12	22722228	22722469	chr12:22722228-22722469	7	+	22722228	22722228	16724991	1	241,	0,
#Deleted in new
chr12	22742581	22743091	chr12:22742581-22743091	3	+	22742581	22742581	8553170	2	51,373,	0,137,
#Partially deleted in new
chr12	22787042	22888021	chr12:22787042-22888021	0	+	22787042	22787042	8553170	3	683,156,58,	0,74026,100921,
#Partially deleted in new
chr12	22859164	22888021	chr12:22859164-22888021	0	+	22859164	22859164	8553170	3	72,156,58,	0,1904,28799,
#Partially deleted in new
chr12	22859474	22971008	chr12:22859474-22971008	1	+	22859474	22859474	8553170	5	71,156,81,103,173,	0,1594,28489,109888,111361,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	22859530	22888021	chr12:22859530-22888021	0	+	22859530	22859530	8553170	3	565,156,58,	0,1538,28433,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	22861068	22871078	chr12:22861068-22871078	0	+	22861068	22861068	8553170	3	156,93,653,	0,8252,9357,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	22964571	23174123	chr12:22964571-23174123	3	+	22964571	22964571	8553170	9	53,103,259,93,94,333,132,118,735,	0,4791,6264,7804,81536,89419,92594,93208,208817,
#Partially deleted in new
chr12	23021786	23054241	chr12:23021786-23054241	1	+	23021786	23021786	8553170	4	114,26,94,251,	0,16715,24321,32204,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	23054236	23174125	chr12:23054236-23174125	1	+	23054236	23054236	8553170	5	87,132,118,40,737,	0,2929,3543,112802,119152,
#Partially deleted in new
chr12	23099367	23188538	chr12:23099367-23188538	0	+	23099367	23099367	8553170	3	108,121,412,	0,86106,88759,
#Deleted in new
chr12	23108457	23108493	chr12:23108457-23108493	7	-	23108457	23108457	16724991	1	36,	0,
#Partially deleted in new
chr12	23175641	23188519	chr12:23175641-23188519	0	+	23175641	23175641	8553170	3	219,69,393,	0,9832,12485,
#Partially deleted in new
chr12	23175647	23191587	chr12:23175647-23191587	3	+	23175647	23175647	789624	5	213,121,1038,97,160,	0,9826,12479,14625,15780,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	23181333	23251499	chr12:23181333-23251499	3	-	23181333	23181333	8553170	2	1290,39,	0,70127,
#Partially deleted in new
chr12	23529499	23896026	chr12:23529499-23896026	1	-	23534218	23896023	789624	14	5023,217,174,109,146,178,147,86,121,69,173,87,211,234,	0,6953,13711,16816,33758,46161,74887,111312,135944,205184,211367,226138,316483,366293,
#Partially deleted in new
chr12	23532297	23949703	chr12:23532297-23949703	1	-	23534218	23896023	789624	13	2225,217,174,109,147,86,121,69,173,87,211,232,140,	0,4155,10913,14018,72089,108514,133146,202386,208569,223340,313685,363495,417266,
#Partially deleted in new
chr12	23532351	23949703	chr12:23532351-23949703	3	-	23534218	23949601	789624	15	2171,217,174,109,146,178,147,86,121,69,173,87,211,232,140,	0,4101,10859,13964,30906,43309,72035,108460,133092,202332,208515,223286,313631,363441,417212,
#Partially deleted in new
chr12	23533682	23949647	chr12:23533682-23949647	1	-	23534218	23949601	789624	15	840,217,174,109,146,178,147,86,121,69,173,87,211,127,84,	0,2770,9528,12633,29575,41978,70704,107129,131761,201001,207184,221955,312300,362215,415881,
#Partially deleted in new
chr12	23533786	23896027	chr12:23533786-23896027	1	-	23534218	23896023	789624	12	736,217,174,109,147,86,121,69,173,87,211,235,	0,2666,9424,12529,70600,107025,131657,200897,207080,221851,312196,362006,
#Partially deleted in new
chr12	23533786	24562449	chr12:23533786-24562449	1	-	23534218	23896023	789624	17	736,217,174,109,147,86,121,69,173,87,211,232,75,97,77,82,117,	0,2666,9424,12529,70600,107025,131657,200897,207080,221851,312196,362006,679556,743429,834776,873698,1028546,
#Partially deleted in new
chr12	23534033	23584612	chr12:23534033-23584612	1	-	23534218	23584552	789624	7	489,217,174,109,146,178,66,	0,2419,9177,12282,29224,41627,50513,
#Partially deleted in new
chr12	23534047	23951032	chr12:23534047-23951032	1	-	23534218	23950876	789624	15	475,217,174,109,146,178,147,86,121,69,173,87,211,232,164,	0,2405,9163,12268,29210,41613,70339,106764,131396,200636,206819,221590,311935,361745,416821,
#Partially deleted in new
chr12	23536529	23950920	chr12:23536529-23950920	0	-	23543312	23950876	789624	13	140,174,146,178,147,86,121,69,173,87,211,232,52,	0,6681,26728,39131,67857,104282,128914,198154,204337,219108,309453,359263,414339,
#Partially deleted in new
chr12	23563315	23738506	chr12:23563315-23738506	0	-	23563315	23563315	8553170	6	88,147,86,121,69,65,	0,41071,77496,102128,171368,175126,
#Partially deleted in new
chr12	23575658	23632194	chr12:23575658-23632194	0	-	23575658	23575658	8553170	3	180,147,49,	0,28728,56487,
#Partially deleted in new
chr12	23575812	23738506	chr12:23575812-23738506	0	-	23575812	23575812	8553170	6	26,147,86,121,69,121,	0,28574,64999,89631,158871,162573,
#Partially deleted in new
chr12	23603920	23734715	chr12:23603920-23734715	0	-	23603920	23603920	8553170	4	613,86,124,32,	0,36891,61523,130763,
#Deleted in new
chr12	23637972	23638487	chr12:23637972-23638487	3	+	23637972	23637972	8553170	2	49,352,	0,163,
#Partially deleted in new
chr12	23740850	23950907	chr12:23740850-23950907	1	-	23740851	23950876	789624	5	189,87,211,232,39,	0,14787,105132,154942,210018,
#Partially deleted in new
chr12	23762474	23951020	chr12:23762474-23951020	1	-	23762586	23949601	789624	5	123,211,127,98,79,	0,83508,133423,187089,188467,
#Partially deleted in new
chr12	23845990	23944352	chr12:23845990-23944352	0	-	23845990	23896023	789624	3	203,232,182,	0,49802,98180,
#Partially deleted in new
chr12	23845998	24357430	chr12:23845998-24357430	0	-	23845998	23896023	789624	5	195,127,75,97,93,	0,49899,367344,431217,511339,
#Partially deleted in new
chr12	23895851	24562487	chr12:23895851-24562487	0	-	23895851	23896023	789624	5	173,75,97,77,159,	0,317491,381364,472711,666477,
#Partially deleted in new
chr12	23920037	23949592	chr12:23920037-23949592	0	-	23920037	23920037	8553170	2	577,29,	0,29526,
#Deleted in new
chr12	24212420	24212495	chr12:24212420-24212495	3	+	24212420	24212420	5263520	1	75,	0,
#Partially deleted in new
chr12	24223270	24227508	chr12:24223270-24227508	0	+	24223270	24223270	789624	2	53,348,	0,3890,
#Partially deleted in new
chr12	24223286	24237965	chr12:24223286-24237965	3	+	24223286	24223286	789624	5	37,227,108,57,144,	0,3874,4424,7272,14535,
#Partially deleted in new
chr12	24277249	24562493	chr12:24277249-24562493	0	-	24277249	24277249	8553170	5	63,77,82,181,156,	0,91313,130235,183346,285088,
#Partially deleted in new
chr12	24331285	24562544	chr12:24331285-24562544	0	-	24331285	24331285	8553170	4	111,77,181,207,	0,37277,129310,231052,
#Partially deleted in new
chr12	24367934	24562382	chr12:24367934-24562382	0	-	24367934	24367934	8553170	3	705,82,45,	0,39550,194403,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	24566963	24584168	chr12:24566963-24584168	3	-	24566963	24566963	789624	4	245,128,124,1213,	0,698,4570,15992,
#Deleted in new
chr12	24583560	24584549	chr12:24583560-24584549	7	+	24583560	24583560	16724991	1	989,	0,
#Deleted in new
chr12	24642686	24643166	chr12:24642686-24643166	7	+	24642686	24642686	16724991	1	480,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	24704564	24774213	chr12:24704564-24774213	3	+	24704564	24704564	8553170	5	192,65,72,98,243,	0,55565,59296,62564,69406,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	24706787	24707083	chr12:24706787-24707083	3	+	24706787	24706787	8553170	1	296,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	24810021	24949459	chr12:24810021-24949459	3	-	24818007	24948932	0	11	8028,75,141,86,143,164,120,111,201,72,533,	0,19801,22701,26489,32060,39764,68508,71279,84253,91792,138905,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	24814802	24902296	chr12:24814802-24902296	1	-	24818007	24901965	0	11	3247,75,141,86,143,164,120,111,201,72,334,	0,15020,17920,21708,27279,34983,63727,66498,79472,87011,87160,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	24814820	24949086	chr12:24814820-24949086	1	-	24818007	24948932	0	9	3229,75,141,86,143,164,120,201,160,	0,15002,17902,21690,27261,34965,63709,79454,134106,
#Partially deleted in new
chr12	24817480	24903075	chr12:24817480-24903075	1	-	24818007	24902988	0	11	569,75,141,86,143,164,120,111,201,72,129,	0,12342,15242,19030,24601,32305,61049,63820,76794,84333,85466,
#Partially deleted in new
chr12	24817655	24830328	chr12:24817655-24830328	0	-	24817655	24817655	8553170	3	394,75,99,	0,12167,12574,
#Partially deleted in new
chr12	24817808	24949043	chr12:24817808-24949043	1	-	24818007	24948932	0	10	241,75,141,86,143,164,120,201,72,117,	0,12014,14914,18702,24273,31977,60721,76466,84005,131118,
#Partially deleted in new
chr12	24830420	24836558	chr12:24830420-24836558	3	+	24830420	24830420	8553170	2	369,82,	0,6056,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	24833810	24902388	chr12:24833810-24902388	0	-	24833810	24833810	8553170	9	997,86,143,164,120,111,201,72,426,	0,2700,8271,15975,44719,47490,60464,68003,68152,
#Partially deleted in new
chr12	24836446	24881398	chr12:24836446-24881398	0	-	24836446	24881398	789624	5	150,143,164,120,98,	0,5635,13339,42083,44854,
#Partially deleted in new
chr12	24878535	24949049	chr12:24878535-24949049	0	-	24878535	24948932	789624	4	114,111,201,123,	0,2765,15739,70391,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	24902308	24904681	chr12:24902308-24904681	3	+	24902308	24902308	8553170	1	2373,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	24945430	24949061	chr12:24945430-24949061	0	-	24945430	24945430	8553170	2	386,135,	0,3496,
#Deleted in new
chr12	24967126	24967504	chr12:24967126-24967504	7	-	24967126	24967126	16724991	1	378,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	24993423	24997439	chr12:24993423-24997439	1	-	24993423	24993423	8553170	4	904,261,143,208,	0,2383,2773,3808,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	24995062	25006403	chr12:24995062-25006403	3	-	24995062	24995062	8553170	4	1005,143,158,137,	0,1134,2371,11204,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	24995669	24996919	chr12:24995669-24996919	0	-	24995669	24995669	8553170	3	398,143,134,	0,527,1116,
#Partially deleted in new
chr12	25004341	25108235	chr12:25004341-25108235	1	+	25004341	25108060	789624	39	574,114,208,80,79,159,118,51,78,57,60,65,100,135,102,164,115,163,62,81,94,148,82,47,65,108,71,58,64,28,141,135,148,44,63,50,102,108,419,	0,899,7002,10840,11008,12792,16448,19529,22447,25936,27800,27963,29506,31311,32243,33632,47893,48452,57250,58478,59381,62023,65008,74902,75056,75314,79081,83758,85272,85421,85715,92568,96836,97856,99495,99667,100019,102601,103475,
#Partially deleted in new
chr12	25021001	25036686	chr12:25021001-25036686	0	+	25021001	25021001	8553170	9	44,51,78,57,60,65,100,135,102,	0,2869,5787,9276,11140,11303,12846,14651,15583,
#Partially deleted in new
chr12	25033758	25066503	chr12:25033758-25066503	0	+	25033758	25033758	8553170	8	189,135,47,115,163,81,97,139,	0,1894,2826,18476,19035,29061,29961,32606,
#Partially deleted in new
chr12	25035479	25038018	chr12:25035479-25038018	0	+	25035479	25035479	8553170	3	308,102,45,	0,1105,2494,
#Partially deleted in new
chr12	25052254	25066409	chr12:25052254-25066409	0	+	25052254	25052254	8553170	6	95,163,62,81,97,45,	0,539,9337,10565,11465,14110,
#Partially deleted in new
chr12	25052270	25088140	chr12:25052270-25088140	0	+	25069407	25088140	789624	10	686,81,97,148,82,47,65,108,71,41,	0,10549,11449,14094,17079,26973,27127,27385,31152,35829,
#Partially deleted in new
chr12	25052271	25108308	chr12:25052271-25108308	0	+	25069407	25106943	789624	20	685,81,97,148,82,47,65,108,71,58,64,28,141,135,148,44,63,50,108,492,	0,10548,11448,14093,17078,26972,27126,27384,31151,35828,37342,37491,37785,44638,48906,49926,51565,51737,54671,55545,
#Partially deleted in new
chr12	25052511	25108235	chr12:25052511-25108235	3	+	25069407	25108060	789624	21	445,81,97,148,82,47,65,108,71,58,64,28,141,135,148,44,63,50,102,108,419,	0,10308,11208,13853,16838,26732,26886,27144,30911,35588,37102,37251,37545,44398,48666,49686,51325,51497,51849,54431,55305,
#Partially deleted in new
chr12	25052511	25088146	chr12:25052511-25088146	0	+	25069407	25088146	789624	11	445,62,81,97,148,82,47,65,108,71,47,	0,9080,10308,11208,13853,16838,26732,26886,27144,30911,35588,
#Partially deleted in new
chr12	25052586	25108334	chr12:25052586-25108334	0	+	25079678	25108060	789624	17	370,47,65,108,71,58,64,28,141,135,148,44,63,50,102,108,518,	0,26657,26811,27069,30836,35513,37027,37176,37470,44323,48591,49611,51250,51422,51774,54356,55230,
#Partially deleted in new
chr12	25052641	25108205	chr12:25052641-25108205	1	+	25069407	25108060	789624	20	315,81,94,82,47,65,108,71,58,64,28,141,135,148,44,63,50,102,108,389,	0,10178,11081,16708,26602,26756,27014,30781,35458,36972,37121,37415,44268,48536,49556,51195,51367,51719,54301,55175,
#Partially deleted in new
chr12	25052664	25069431	chr12:25052664-25069431	0	+	25069407	25069431	789624	6	292,62,81,94,148,82,	0,8927,10155,11058,13700,16685,
#Partially deleted in new
chr12	25052699	25079749	chr12:25052699-25079749	0	+	25069407	25079749	789624	8	257,62,81,97,82,47,65,94,	0,8892,10120,11020,16650,26544,26698,26956,
#Partially deleted in new
chr12	25052739	25108248	chr12:25052739-25108248	1	+	25069407	25108060	789624	20	217,97,148,82,47,65,108,71,58,64,28,141,135,148,44,63,50,102,108,432,	0,10980,13625,16610,26504,26658,26916,30683,35360,36874,37023,37317,44170,48438,49458,51097,51269,51621,54203,55077,
#Partially deleted in new
chr12	25052739	25108248	chr12:25052739-25108248	0	+	25052739	25052739	8553170	21	217,62,81,97,148,82,47,366,71,58,64,28,141,135,148,44,63,50,102,108,432,	0,8852,10080,10980,13625,16610,26504,26658,30683,35360,36874,37023,37317,44170,48438,49458,51097,51269,51621,54203,55077,
#Partially deleted in new
chr12	25052944	25089677	chr12:25052944-25089677	0	+	25069407	25079754	789624	12	12,62,81,94,148,82,47,65,62,71,58,64,	0,8647,9875,10778,13420,16405,26299,26453,26757,30478,35155,36669,
#Partially deleted in new
chr12	25075739	25090147	chr12:25075739-25090147	0	+	25075739	25075739	8553170	9	63,47,65,62,71,58,64,28,91,	0,3504,3658,3962,7683,12360,13874,14023,14317,
#Partially deleted in new
chr12	25089773	25091120	chr12:25089773-25091120	0	+	25089773	25090866	789624	3	17,141,305,	0,283,1042,
#Deleted in new
chr12	25092714	25093900	chr12:25092714-25093900	7	-	25092714	25092714	16724991	1	1186,	0,
#Partially deleted in new
chr12	25096867	25100980	chr12:25096867-25100980	3	-	25096867	25096867	8553170	3	196,193,101,	0,527,4012,
#Partially deleted in new
chr12	25096932	25107989	chr12:25096932-25107989	0	+	25096932	25101969	789624	9	112,148,88,44,63,50,102,108,173,	0,4245,5005,5265,6904,7076,7428,10010,10884,
#Partially deleted in new
chr12	25096957	25102778	chr12:25096957-25102778	0	+	25096957	25096957	8553170	3	87,148,581,	0,4220,5240,
#Deleted in new
chr12	25103123	25103869	chr12:25103123-25103869	3	-	25103123	25103123	8553170	1	746,	0,
#Partially deleted in new
chr12	25104328	25107933	chr12:25104328-25107933	0	+	25104328	25104328	8553170	3	134,108,117,	0,2614,3488,
#Partially deleted in new
chr12	25108419	25195160	chr12:25108419-25195160	1	-	25108547	25195078	789624	15	404,114,168,215,157,161,76,313,104,147,138,102,92,85,85,	0,1707,3352,6236,10725,13333,14791,35945,38581,41208,45899,46891,50052,52693,86656,
#Partially deleted in new
chr12	25108419	25195098	chr12:25108419-25195098	1	-	25108755	25195062	789624	16	342,114,168,215,157,161,76,313,104,147,138,102,92,85,18,213,	0,1707,3352,6236,10725,13333,14791,35945,38581,41208,45899,46891,50052,52693,82194,86466,
#Partially deleted in new
chr12	25108419	25195144	chr12:25108419-25195144	3	-	25108547	25195078	789624	16	404,114,168,215,157,161,76,313,104,147,138,102,92,85,18,69,	0,1707,3352,6236,10725,13333,14791,35945,38581,41208,45899,46891,50052,52693,82194,86656,
#Partially deleted in new
chr12	25108419	25195160	chr12:25108419-25195160	1	-	25108547	25158531	789624	17	404,114,168,215,157,161,76,313,104,147,138,102,92,85,38,18,85,	0,1707,3352,6236,10725,13333,14791,35945,38581,41208,45899,46891,50052,52693,77329,82194,86656,
#Partially deleted in new
chr12	25108419	25158563	chr12:25108419-25158563	0	-	25108547	25158563	789624	11	404,114,168,215,157,161,76,147,138,102,92,	0,1707,3352,6236,10725,13333,14791,41208,45899,46891,50052,
#Partially deleted in new
chr12	25108420	25195162	chr12:25108420-25195162	0	-	25155392	25195078	789624	14	341,114,168,215,157,161,76,313,104,147,138,102,85,87,	0,1706,3351,6235,10724,13332,14790,35944,38580,41207,45898,46890,52692,86655,
#Partially deleted in new
chr12	25108423	25195126	chr12:25108423-25195126	1	-	25108547	25195078	789624	13	400,114,168,215,157,161,76,313,104,147,138,102,51,	0,1703,3348,6232,10721,13329,14787,35941,38577,41204,45895,46887,86652,
#Partially deleted in new
chr12	25111816	25149692	chr12:25111816-25149692	0	-	25111816	25111816	8553170	3	123,215,65,	0,2839,37811,
#Partially deleted in new
chr12	25114656	25195126	chr12:25114656-25195126	0	-	25114656	25114656	8553170	12	214,143,161,76,313,104,147,138,102,92,85,51,	0,4502,7096,8554,29708,32344,34971,39662,40654,43815,46456,80419,
#Partially deleted in new
chr12	25149627	25195157	chr12:25149627-25195157	0	-	25149627	25149627	8553170	6	147,138,102,266,85,82,	0,4691,5683,8844,11485,45448,
#Partially deleted in new
chr12	25149761	25195160	chr12:25149761-25195160	0	-	25158561	25195078	789624	7	13,138,102,92,48,85,85,	0,4557,5549,8710,8928,11351,45314,
#Partially deleted in new
chr12	25154374	25195127	chr12:25154374-25195127	0	-	25154374	25154374	8553170	5	82,102,92,121,70,	0,936,4097,6702,40683,
#Partially deleted in new
chr12	25195215	25205014	chr12:25195215-25205014	3	+	25203956	25204312	789624	3	122,88,924,	0,8704,8875,
#Partially deleted in new
chr12	25195215	25205135	chr12:25195215-25205135	1	+	25203962	25204312	789624	3	126,88,1045,	0,8704,8875,
#Partially deleted in new
chr12	25195260	25204683	chr12:25195260-25204683	1	+	25203962	25204137	789624	3	77,88,618,	0,8659,8805,
#Partially deleted in new
chr12	25195264	25205015	chr12:25195264-25205015	1	+	25203962	25204312	789624	3	73,88,925,	0,8655,8826,
#Partially deleted in new
chr12	25195269	25204172	chr12:25195269-25204172	1	+	25203962	25204088	789624	3	68,108,253,	0,8455,8650,
#Partially deleted in new
chr12	25195271	25204666	chr12:25195271-25204666	1	+	25203962	25204312	789624	4	66,108,88,576,	0,8453,8648,8819,
#Partially deleted in new
chr12	25195271	25204670	chr12:25195271-25204670	1	+	25203962	25204312	789624	4	66,99,88,580,	0,8453,8648,8819,
#Partially deleted in new
chr12	25195276	25209645	chr12:25195276-25209645	1	+	25203962	25209263	789624	4	61,108,88,451,	0,8448,8643,13918,
#Partially deleted in new
chr12	25195276	25196184	chr12:25195276-25196184	0	+	25195276	25195276	8553170	2	61,477,	0,431,
#Partially deleted in new
chr12	25195276	25204732	chr12:25195276-25204732	1	+	25203962	25204088	789624	2	61,813,	0,8643,
#Partially deleted in new
chr12	25195552	25204147	chr12:25195552-25204147	0	+	25203962	25204147	789624	3	88,88,57,	0,8367,8538,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	25204788	25250931	chr12:25204788-25250931	1	-	25209794	25245384	0	5	5123,160,179,122,181,	0,20825,22445,40485,45962,
#Partially deleted in new
chr12	25209167	25250936	chr12:25209167-25250936	1	-	25209794	25245384	789624	3	744,122,186,	0,36106,41583,
#Partially deleted in new
chr12	25209430	25250803	chr12:25209430-25250803	3	-	25215440	25245384	0	6	481,124,160,179,122,53,	0,6006,16183,17803,35843,41320,
#Deleted in new
chr12	25210651	25211233	chr12:25210651-25211233	3	+	25210651	25210651	8553170	1	582,	0,
#Deleted in new
chr12	25225102	25225665	chr12:25225102-25225665	3	+	25225102	25225102	8553170	1	563,	0,
#Partially deleted in new
chr12	25233818	25250929	chr12:25233818-25250929	1	-	25235205	25245384	789624	3	1408,122,166,	0,11455,16945,
#Deleted in new
chr12	25385669	25386241	chr12:25385669-25386241	3	-	25385669	25385669	8553170	1	572,	0,
#Deleted in new
chr12	25409292	25409445	chr12:25409292-25409445	7	-	25409292	25409292	16724991	1	153,	0,
#Partially deleted in new
chr12	25409306	25526156	chr12:25409306-25526156	0	-	25503759	25526156	789624	5	124,63,173,218,58,	0,94431,109488,110551,116792,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	25423599	25424942	chr12:25423599-25424942	3	+	25423599	25423599	8553170	1	1343,	0,
#Deleted in new
chr12	25435580	25436238	chr12:25435580-25436238	7	-	25435580	25435580	16724991	1	658,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	25440874	25441052	chr12:25440874-25441052	7	-	25440874	25440874	16724991	1	178,	0,
#Partially deleted in new
chr12	25476081	25553244	chr12:25476081-25553244	3	-	25503759	25553094	789624	9	379,63,173,218,120,187,181,221,176,	0,27656,42713,43776,50017,50687,70292,73244,76987,
#Partially deleted in new
chr12	25476109	25553252	chr12:25476109-25553252	1	-	25503759	25546510	789624	10	351,63,173,218,120,187,181,127,221,88,	0,27628,42685,43748,49989,50659,70264,71115,73216,77055,
#Partially deleted in new
chr12	25476280	25553283	chr12:25476280-25553283	1	-	25503759	25552959	789624	10	180,63,173,218,120,187,181,221,119,215,	0,27457,42514,43577,49818,50488,70093,73045,76590,76788,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	25497512	25648554	chr12:25497512-25648554	1	-	25503759	25648551	789624	8	282,63,173,218,120,187,181,61,	0,6225,21282,22345,28586,29256,48861,150981,
#Partially deleted in new
chr12	25499851	25553281	chr12:25499851-25553281	1	-	25503759	25552959	789624	9	145,63,173,218,187,181,221,119,213,	0,3886,18943,20006,26917,46522,49474,53019,53217,
#Partially deleted in new
chr12	25502924	25519961	chr12:25502924-25519961	0	-	25503759	25519961	789624	4	114,63,173,104,	0,813,15870,16933,
#Partially deleted in new
chr12	25519869	25648562	chr12:25519869-25648562	0	-	25519869	25526873	789624	4	206,120,187,69,	0,6229,6899,128624,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	25526797	25630750	chr12:25526797-25630750	0	-	25526797	25549497	789624	4	158,181,221,156,	0,19576,22528,103797,
#Partially deleted in new
chr12	25526811	25648544	chr12:25526811-25648544	0	-	25526811	25549497	789624	4	144,181,221,51,	0,19562,22514,121682,
#Partially deleted in new
chr12	25546509	25648579	chr12:25546509-25648579	0	-	25546509	25549497	789624	5	45,221,131,42,86,	0,2816,10729,35912,101984,
#Partially deleted in new
chr12	25585993	25592925	chr12:25585993-25592925	0	-	25585993	25585993	8553170	2	105,431,	0,6501,
#Partially deleted in new
chr12	25586009	25592928	chr12:25586009-25592928	3	-	25586009	25586009	8553170	2	103,434,	0,6485,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	25779286	25779569	chr12:25779286-25779569	3	-	25779286	25779286	8553170	1	283,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	25782705	25814171	chr12:25782705-25814171	3	-	25782705	25782705	8553170	3	555,126,91,	0,18989,31375,
#Deleted in new
chr12	25803297	25804526	chr12:25803297-25804526	7	+	25803297	25803297	16724991	1	1229,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	25831415	25834182	chr12:25831415-25834182	3	-	25831415	25831415	8553170	2	139,234,	0,2533,
#Partially deleted in new
chr12	25874019	25874079	chr12:25874019-25874079	3	-	25874019	25874019	5263520	1	60,	0,
#Partially deleted in new
chr12	25939328	25959442	chr12:25939328-25959442	0	-	25939328	25939328	8553170	4	178,121,126,117,	0,16898,17310,19997,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	25944856	25958578	chr12:25944856-25958578	3	-	25944856	25944856	8553170	7	1279,104,319,104,121,123,560,	0,2662,7901,10281,11370,11782,13162,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	25954654	25958046	chr12:25954654-25958046	0	-	25954654	25954654	8553170	3	587,126,28,	0,1984,3364,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	25954804	25959065	chr12:25954804-25959065	0	-	25954804	25954804	8553170	4	437,121,123,134,	0,1422,1834,4127,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	25954807	25959765	chr12:25954807-25959765	1	-	25954807	25954807	789624	4	434,121,126,440,	0,1419,1831,4518,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	25954920	25957585	chr12:25954920-25957585	0	-	25954920	25954920	789624	4	321,121,123,133,	0,1306,1718,2532,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	25955034	25959065	chr12:25955034-25959065	0	-	25955034	25955034	8553170	4	207,121,126,134,	0,1192,1604,3897,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	25959028	26079892	chr12:25959028-26079892	1	+	26055343	26079073	0	6	120,94,211,890,145,860,	0,36008,96207,105469,108540,120004,
#Partially deleted in new
chr12	25959057	26072869	chr12:25959057-26072869	3	+	26055343	26068818	0	5	91,211,890,145,4173,	0,96178,105440,108511,109639,
#Partially deleted in new
chr12	25959057	26064667	chr12:25959057-26064667	0	+	26055343	26064667	789624	4	91,94,168,170,	0,35979,96221,105440,
#Partially deleted in new
chr12	25959057	26020468	chr12:25959057-26020468	0	+	25959057	25959057	8553170	3	91,94,324,	0,35979,61087,
#Partially deleted in new
chr12	25959064	26079073	chr12:25959064-26079073	1	+	26055343	26079073	0	5	84,168,890,145,41,	0,96214,105433,108504,119968,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	25973754	26069485	chr12:25973754-26069485	1	+	26055343	26068818	0	6	133,94,168,890,145,789,	0,21282,81524,90743,93814,94942,
#Partially deleted in new
chr12	25995003	26072871	chr12:25995003-26072871	1	+	26055343	26068818	0	5	127,168,890,145,4175,	0,60275,69494,72565,73693,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	26011735	26065053	chr12:26011735-26065053	0	+	26055343	26065053	789624	3	86,211,556,	0,43500,52762,
#Partially deleted in new
chr12	26021439	26064762	chr12:26021439-26064762	0	+	26055343	26064762	789624	3	79,211,265,	0,33796,43058,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	26052563	26069011	chr12:26052563-26069011	1	+	26055343	26068818	0	5	433,211,890,145,315,	0,2672,11934,15005,16133,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	26052563	26055432	chr12:26052563-26055432	0	+	26055343	26055432	789624	2	433,154,	0,2715,
#Partially deleted in new
chr12	26052563	26065019	chr12:26052563-26065019	0	+	26055343	26065019	789624	3	39,211,522,	0,2672,11934,
#Partially deleted in new
chr12	26052568	26064872	chr12:26052568-26064872	0	+	26055343	26064872	789624	3	34,168,375,	0,2710,11929,
#Partially deleted in new
chr12	26055235	26065140	chr12:26055235-26065140	1	+	26055343	26064726	789624	3	211,215,426,	0,9262,9479,
#Partially deleted in new
chr12	26065027	26071712	chr12:26065027-26071712	0	+	26065027	26068818	789624	4	360,145,227,57,	0,2541,3669,6628,
#Deleted in new
chr12	26120025	26125127	chr12:26120025-26125127	3	-	26122065	26124779	789624	5	3143,112,108,64,410,	0,3604,4046,4493,4692,
#Partially deleted in new
chr12	26121990	26231014	chr12:26121990-26231014	0	+	26224322	26231014	789624	3	162,87,304,	0,102302,108720,
#Partially deleted in new
chr12	26122051	26299290	chr12:26122051-26299290	0	+	26122051	26122051	8553170	4	101,53,161,65,	0,130816,176213,177174,
#Deleted in new
chr12	26122957	26123768	chr12:26122957-26123768	0	-	26122957	26122957	8553170	2	211,139,	0,672,
#Deleted in new
chr12	26123987	26124899	chr12:26123987-26124899	0	-	26123987	26123987	8553170	3	192,64,182,	0,531,730,
#Deleted in new
chr12	26125154	26126084	chr12:26125154-26126084	1	-	26125154	26125154	8553170	3	258,76,102,	0,351,828,
#Deleted in new
chr12	26125312	26126617	chr12:26125312-26126617	3	-	26125312	26125312	8553170	3	100,247,219,	0,193,1086,
#Partially deleted in new
chr12	26134963	26181284	chr12:26134963-26181284	0	+	26134963	26134963	8553170	2	67,1289,	0,45032,
#Partially deleted in new
chr12	26134966	26231146	chr12:26134966-26231146	1	+	26224322	26231076	789624	3	64,87,436,	0,89326,95744,
#Partially deleted in new
chr12	26195339	26234779	chr12:26195339-26234779	1	+	26224322	26231076	789624	3	192,87,4069,	0,28953,35371,
#Partially deleted in new
chr12	26195355	26287738	chr12:26195355-26287738	0	+	26195355	26195355	8553170	4	176,87,53,256,	0,28937,57512,92127,
#Partially deleted in new
chr12	26195495	26232955	chr12:26195495-26232955	3	+	26195672	26231076	789624	3	456,87,2245,	0,28797,35215,
#Partially deleted in new
chr12	26195672	26252920	chr12:26195672-26252920	1	+	26195672	26252888	789624	3	279,87,53,	0,28620,57195,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	26211163	26335856	chr12:26211163-26335856	3	-	26211163	26211163	8553170	4	508,61,93,37,	0,3553,115220,124656,
#Partially deleted in new
chr12	26230818	26319720	chr12:26230818-26319720	0	-	26230818	26230818	8553170	3	301,63,119,	0,1104,88783,
#Partially deleted in new
chr12	26230848	26271822	chr12:26230848-26271822	3	-	26230848	26230848	8553170	3	271,63,160,	0,1074,40814,
#Partially deleted in new
chr12	26231393	26271920	chr12:26231393-26271920	1	-	26231393	26231393	8553170	3	387,63,258,	0,529,40269,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	26273328	26273900	chr12:26273328-26273900	3	-	26273328	26273328	8553170	1	572,	0,
#Partially deleted in new
chr12	26318952	26421462	chr12:26318952-26421462	3	+	26318952	26318952	8553170	6	52,195,171,85,74,198,	0,81704,87510,100455,100823,102312,
#Deleted in new
chr12	26335863	26336950	chr12:26335863-26336950	3	-	26335863	26335863	8553170	2	46,126,	0,961,
#Partially deleted in new
chr12	26336514	26833198	chr12:26336514-26833198	3	-	26339396	26832781	789624	57	2969,162,161,166,131,93,196,165,176,126,193,108,123,96,111,201,257,184,188,109,109,143,191,121,129,126,252,201,123,126,90,174,166,58,130,194,151,145,252,186,120,173,162,142,161,100,152,45,96,147,84,99,159,87,116,71,509,	0,3652,50919,62361,63613,74805,78788,82534,91398,99706,102612,107028,138781,140397,144616,147183,149589,150553,157638,158637,213732,219718,225247,242198,243512,258950,260368,262630,263472,265855,266102,284608,285725,287784,291518,295351,317461,319193,319782,321192,321496,322598,327170,329395,345359,346059,349966,359091,374658,378784,379237,379629,385882,388141,389135,453642,496175,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	26373597	26373733	chr12:26373597-26373733	7	-	26373597	26373597	16724991	1	136,	0,
#Partially deleted in new
chr12	26387541	26494233	chr12:26387541-26494233	0	-	26486889	26494233	789624	18	53,166,131,93,196,165,176,126,193,108,123,96,111,201,257,117,184,81,	0,11334,12586,23778,27761,31507,40371,48679,51585,56001,87754,89370,93589,96156,98562,99275,99526,106611,
#Partially deleted in new
chr12	26411212	26427937	chr12:26411212-26427937	0	-	26411212	26411212	8553170	4	200,196,165,25,	0,4090,7836,16700,
#Partially deleted in new
chr12	26494034	26495245	chr12:26494034-26495245	0	-	26494034	26494034	8553170	2	306,94,	0,1117,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	26494205	26495560	chr12:26494205-26495560	0	-	26494205	26494205	8553170	2	135,409,	0,946,
#Partially deleted in new
chr12	26621181	26630714	chr12:26621181-26630714	0	-	26621181	26621181	8553170	5	115,166,58,130,112,	0,1058,3117,6851,9421,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	26623368	26649479	chr12:26623368-26649479	3	+	26623368	26623368	8553170	3	34,115,727,	0,3926,25384,
#Partially deleted in new
chr12	26695601	26715728	chr12:26695601-26715728	0	-	26695601	26695601	8553170	3	49,96,430,	0,15571,19697,
#Partially deleted in new
chr12	26716161	26832786	chr12:26716161-26832786	0	-	26724710	26832781	789624	5	81,159,87,116,97,	0,6235,8494,9488,116528,
#Partially deleted in new
chr12	26721286	26832781	chr12:26721286-26832781	1	-	26721321	26832781	789624	6	56,159,87,116,71,92,	0,1110,3369,4363,68870,111403,
#Partially deleted in new
chr12	26722437	26726013	chr12:26722437-26726013	0	-	26722437	26722437	8553170	3	118,87,364,	0,2218,3212,
#Partially deleted in new
chr12	26800842	26801302	chr12:26800842-26801302	7	+	26800842	26800842	16724991	1	460,	0,
#Partially deleted in new
chr12	26905180	26938321	chr12:26905180-26938321	3	-	26905496	26936803	789624	17	356,136,140,231,155,171,179,90,90,85,129,91,81,203,75,236,526,	0,1121,5997,8276,8793,9227,10821,12171,12463,17435,19174,20580,23024,23522,29375,31398,32615,
#Partially deleted in new
chr12	26905180	26917734	chr12:26905180-26917734	0	-	26905496	26917734	789624	8	356,136,140,231,155,179,90,91,	0,1121,5997,8276,8793,10821,12171,12463,
#Deleted in new
chr12	26905184	26906484	chr12:26905184-26906484	0	-	26905184	26905184	8553170	2	352,183,	0,1117,
#Partially deleted in new
chr12	26914045	26924431	chr12:26914045-26924431	0	-	26914045	26924431	789624	5	83,125,90,85,77,	0,362,3306,8570,10309,
#Partially deleted in new
chr12	26925760	26937972	chr12:26925760-26937972	0	-	26925760	26928902	789624	4	91,81,203,177,	0,2444,2942,12035,
#Partially deleted in new
chr12	26925760	26938304	chr12:26925760-26938304	0	-	26925760	26936803	789624	7	91,81,203,75,236,152,37,	0,2444,2942,8795,10818,11897,12507,
#Deleted in new
chr12	26928253	26929056	chr12:26928253-26929056	0	-	26928253	26928253	8553170	2	32,354,	0,449,
#Partially deleted in new
chr12	26928715	26938326	chr12:26928715-26938326	0	-	26928715	26936803	789624	4	190,75,236,59,	0,5840,7863,9552,
#Partially deleted in new
chr12	26938382	26966553	chr12:26938382-26966553	3	+	26954158	26964733	789624	7	328,149,118,143,114,114,1958,	0,15762,18160,19218,22132,24959,26213,
#Partially deleted in new
chr12	26938480	26956587	chr12:26938480-26956587	0	+	26954158	26956587	789624	4	230,158,149,45,	0,15068,15664,18062,
#Partially deleted in new
chr12	26938483	26957971	chr12:26938483-26957971	0	+	26938483	26938483	8553170	4	227,149,118,371,	0,15661,18059,19117,
#Partially deleted in new
chr12	26938496	26960846	chr12:26938496-26960846	1	+	26954158	26960637	789624	5	214,149,118,143,332,	0,15648,18046,19104,22018,
#Partially deleted in new
chr12	26938499	26966650	chr12:26938499-26966650	1	+	26954158	26964733	789624	6	211,149,118,143,114,2055,	0,15645,18043,19101,24842,26096,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	26960995	26965080	chr12:26960995-26965080	0	+	26960995	26960995	8553170	2	2460,485,	0,3600,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	26971585	26979582	chr12:26971585-26979582	3	+	26971585	26971585	8553170	2	960,1589,	0,6408,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	26973194	27014394	chr12:26973194-27014394	3	-	26973964	27014168	789624	12	1033,163,98,153,81,87,178,172,121,151,155,317,	0,2301,3065,6589,7371,9578,17255,22042,23547,26331,30041,40883,
#Deleted in new
chr12	26974095	26975775	chr12:26974095-26975775	0	-	26974095	26974095	8553170	2	132,280,	0,1400,
#Partially deleted in new
chr12	26974153	26990546	chr12:26974153-26990546	0	-	26974153	26990546	789624	6	74,163,98,153,81,97,	0,1342,2106,5630,6412,16296,
#Partially deleted in new
chr12	26975495	26995268	chr12:26975495-26995268	0	-	26975602	26995268	789624	5	163,81,87,178,32,	0,5070,7277,14954,19741,
#Partially deleted in new
chr12	26975555	26980608	chr12:26975555-26980608	0	-	26975555	26980608	789624	3	103,98,43,	0,704,5010,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	26975576	26995297	chr12:26975576-26995297	0	-	26978053	26995297	789624	8	82,98,143,153,81,87,178,61,	0,683,2375,4207,4989,7196,14873,19660,
#Partially deleted in new
chr12	26976261	26996785	chr12:26976261-26996785	0	-	26983531	26996785	789624	7	96,81,87,104,178,172,44,	0,4304,6511,7231,14188,18975,20480,
#Partially deleted in new
chr12	26976329	26980271	chr12:26976329-26980271	0	-	26976329	26976329	8553170	2	28,488,	0,3454,
#Partially deleted in new
chr12	26979901	27014211	chr12:26979901-27014211	0	-	26979901	26979901	8553170	5	35,172,121,151,134,	0,15335,16840,19624,34176,
#Partially deleted in new
chr12	26980565	27014347	chr12:26980565-27014347	0	-	26980565	26995299	789624	5	81,87,178,172,270,	0,2207,9884,14671,33512,
#Partially deleted in new
chr12	26980565	27003285	chr12:26980565-27003285	0	-	26980565	26995299	789624	5	81,87,178,172,50,	0,2207,9884,14671,22670,
#Partially deleted in new
chr12	26995234	27014359	chr12:26995234-27014359	0	-	26995234	27014168	789624	3	174,121,282,	0,1507,18843,
#Partially deleted in new
chr12	26995239	27014373	chr12:26995239-27014373	0	-	26999617	27014168	789624	4	169,121,151,296,	0,1502,4286,18838,
#Partially deleted in new
chr12	26995300	27014374	chr12:26995300-27014374	0	-	26995300	26999556	789624	5	108,121,123,155,66,	0,1441,4225,7935,19008,
#Partially deleted in new
chr12	26995360	27014434	chr12:26995360-27014434	0	-	26995360	26999556	789624	5	48,121,151,155,126,	0,1381,4165,7875,18948,
#Partially deleted in new
chr12	26996782	27014369	chr12:26996782-27014369	0	-	26996782	26999556	789624	4	80,241,155,61,	0,2743,6453,17526,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	26996850	27013014	chr12:26996850-27013014	0	-	26996850	27012737	789624	4	12,151,155,305,	0,2675,6385,15859,
#Partially deleted in new
chr12	26999588	27014398	chr12:26999588-27014398	0	-	26999588	27014168	789624	3	88,170,321,	0,3647,14489,
#Partially deleted in new
chr12	26999703	27014384	chr12:26999703-27014384	0	-	26999703	26999703	8553170	3	91,155,307,	0,3532,14374,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	27022545	27030756	chr12:27022545-27030756	1	+	27022579	27030234	789624	6	76,115,101,145,115,23,	0,3874,4801,5739,7612,8188,
#Partially deleted in new
chr12	27022549	27029749	chr12:27022549-27029749	3	+	27022579	27028461	789624	4	72,115,101,1465,	0,3870,4797,5735,
#Partially deleted in new
chr12	27022549	27029485	chr12:27022549-27029485	0	+	27022549	27022549	789624	3	72,101,1201,	0,4797,5735,
#Partially deleted in new
chr12	27022561	27028336	chr12:27022561-27028336	0	+	27022579	27022843	789624	4	310,115,101,52,	0,3858,4785,5723,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	27022576	27066240	chr12:27022576-27066240	0	+	27022576	27022576	8553170	5	45,101,79,221,106,	0,4770,23577,41699,43558,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	27030259	27030673	chr12:27030259-27030673	0	+	27030259	27030259	8553170	1	414,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	27037099	27038960	chr12:27037099-27038960	3	+	27037099	27037099	8553170	1	1861,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	27046151	27066343	chr12:27046151-27066343	0	+	27046151	27046151	8553170	4	81,167,221,209,	0,14675,18124,19983,
#Deleted in new
chr12	27081057	27082514	chr12:27081057-27082514	3	-	27081173	27082483	789624	2	410,547,	0,910,
#Deleted in new
chr12	27093922	27094223	chr12:27093922-27094223	7	-	27093922	27093922	16724991	1	301,	0,
#Partially deleted in new
chr12	27105150	27161393	chr12:27105150-27161393	3	-	27105150	27105150	8553170	2	108,243,	0,56000,
#Partially deleted in new
chr12	27121909	27147664	chr12:27121909-27147664	7	+	27121909	27121909	16724991	8	135,206,87,114,132,93,93,123,	0,1266,11621,13063,18056,23082,23504,25632,
#Partially deleted in new
chr12	27148282	27161266	chr12:27148282-27161266	1	-	27148282	27148282	8553170	2	264,116,	0,12868,
#Partially deleted in new
chr12	27243967	27309197	chr12:27243967-27309197	0	+	27297720	27309197	789624	5	141,145,52,123,84,	0,53742,58169,64371,65146,
#Partially deleted in new
chr12	27244174	27325959	chr12:27244174-27325959	3	+	27297720	27322455	789624	14	158,145,52,123,84,124,155,103,62,118,124,96,92,3632,	0,53535,57962,64164,64939,68374,70329,70840,71114,73161,73721,75153,77968,78153,
#Partially deleted in new
chr12	27244232	27315106	chr12:27244232-27315106	0	+	27297720	27315106	789624	7	100,145,52,84,124,155,92,	0,53477,57904,64881,68316,70271,70782,
#Partially deleted in new
chr12	27244254	27312663	chr12:27244254-27312663	0	+	27297720	27302197	789624	6	78,145,119,123,84,115,	0,53455,57882,64084,64859,68294,
#Partially deleted in new
chr12	27244266	27302506	chr12:27244266-27302506	0	+	27244266	27244266	8553170	3	66,145,370,	0,53443,57870,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	27244285	27298419	chr12:27244285-27298419	0	+	27244285	27244285	8553170	2	47,710,	0,53424,
#Partially deleted in new
chr12	27244292	27308435	chr12:27244292-27308435	0	+	27297720	27308435	789624	5	40,129,145,52,97,	0,52737,53417,57844,64046,
#Partially deleted in new
chr12	27244307	27309197	chr12:27244307-27309197	0	+	27297720	27300590	789624	6	25,145,48,52,123,84,	0,53402,56246,57829,64031,64806,
#Partially deleted in new
chr12	27245656	27309197	chr12:27245656-27309197	0	+	27297720	27309197	789624	5	144,145,52,123,84,	0,52053,56480,62682,63457,
#Partially deleted in new
chr12	27293627	27309197	chr12:27293627-27309197	0	+	27297720	27309197	789624	5	122,145,52,123,84,	0,4082,8509,14711,15486,
#Partially deleted in new
chr12	27302135	27315350	chr12:27302135-27315350	0	+	27302135	27314512	789624	6	53,123,84,155,103,62,	0,6203,6978,12368,12879,13153,
#Partially deleted in new
chr12	27314562	27322934	chr12:27314562-27322934	0	+	27314562	27315282	789624	8	96,103,133,118,124,96,92,607,	0,452,655,2773,3333,4765,7580,7765,
#Partially deleted in new
chr12	27317581	27322683	chr12:27317581-27322683	0	+	27317581	27317581	8553170	4	438,96,92,356,	0,1746,4561,4746,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	27332853	27425289	chr12:27332853-27425289	1	+	27333072	27420532	0	16	250,151,42,158,80,93,118,144,241,107,151,59,109,79,109,4894,	0,35408,43492,47393,52627,54374,56325,57242,67680,68403,68670,69765,70579,83015,85234,87542,
#Partially deleted in new
chr12	27332919	27420533	chr12:27332919-27420533	1	+	27333072	27420532	0	15	217,151,158,80,93,118,144,241,107,151,59,109,79,109,138,	0,35342,47327,52561,54308,56259,57176,67614,68337,68604,69699,70513,82949,85168,87476,
#Partially deleted in new
chr12	27332919	27420549	chr12:27332919-27420549	1	+	27333072	27420464	0	14	217,151,158,80,93,118,144,241,107,151,59,109,79,154,	0,35342,47327,52561,54308,56259,57176,67614,68337,68604,69699,70513,82949,87476,
#Partially deleted in new
chr12	27333054	27420590	chr12:27333054-27420590	1	+	27333072	27420532	0	15	49,151,158,80,93,118,144,241,107,151,59,109,79,109,195,	0,35207,47192,52426,54173,56124,57041,67479,68202,68469,69564,70378,82814,85033,87341,
#Partially deleted in new
chr12	27333054	27420894	chr12:27333054-27420894	3	+	27333072	27420532	0	17	49,151,102,42,158,80,93,118,144,241,107,151,59,109,79,109,499,	0,35207,37074,43291,47192,52426,54173,56124,57041,67479,68202,68469,69564,70378,82814,85033,87341,
#Partially deleted in new
chr12	27333054	27420533	chr12:27333054-27420533	1	+	27333072	27420532	0	16	49,151,102,158,80,93,118,144,241,107,151,59,109,79,109,138,	0,35207,37074,47192,52426,54173,56124,57041,67479,68202,68469,69564,70378,82814,85033,87341,
#Partially deleted in new
chr12	27368294	27420725	chr12:27368294-27420725	0	+	27368294	27420532	789624	15	118,63,158,80,93,118,144,241,107,151,59,109,79,109,330,	0,1873,11952,17186,18933,20884,21801,32239,32962,33229,34324,35138,47574,49793,52101,
#Partially deleted in new
chr12	27368316	27377503	chr12:27368316-27377503	0	+	27368316	27368316	8553170	4	96,102,42,63,	0,1812,8029,9124,
#Partially deleted in new
chr12	27368335	27420590	chr12:27368335-27420590	1	+	27368341	27420532	0	14	77,158,80,93,118,144,241,107,151,59,109,79,109,195,	0,11911,17145,18892,20843,21760,32198,32921,33188,34283,35097,47533,49752,52060,
#Partially deleted in new
chr12	27389788	27446625	chr12:27389788-27446625	3	-	27389788	27389788	789624	4	380,95,200,129,	0,606,4635,56708,
#Partially deleted in new
chr12	27466809	27502185	chr12:27466809-27502185	1	+	27470631	27502121	789624	8	166,144,100,128,88,57,176,263,	0,3812,5966,7976,21650,27490,28870,35113,
#Partially deleted in new
chr12	27466809	27502185	chr12:27466809-27502185	3	+	27470631	27502121	789624	9	166,144,100,128,150,88,57,176,263,	0,3812,5966,7976,8772,21650,27490,28870,35113,
#Deleted in new
chr12	27470621	27473117	chr12:27470621-27473117	0	+	27470621	27470621	8553170	2	144,342,	0,2154,
#Partially deleted in new
chr12	27470631	27502185	chr12:27470631-27502185	1	+	27470631	27502121	789624	8	134,100,128,150,88,57,176,263,	0,2144,4154,4950,17828,23668,25048,31291,
#Partially deleted in new
chr12	27474895	27495798	chr12:27474895-27495798	0	+	27474895	27474895	8553170	3	18,150,119,	0,686,20784,
#Partially deleted in new
chr12	27493835	27502147	chr12:27493835-27502147	0	+	27493835	27493835	8553170	3	521,176,225,	0,1844,8087,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	27496936	27498589	chr12:27496936-27498589	7	+	27496936	27496936	16724991	2	576,842,	0,811,
#Partially deleted in new
chr12	27523430	27650052	chr12:27523430-27650052	0	+	27647830	27650052	789624	5	277,88,87,114,43,	0,54721,122631,124298,126579,
#Partially deleted in new
chr12	27524141	27658848	chr12:27524141-27658848	0	+	27633396	27658848	789624	10	224,88,99,206,87,114,132,93,115,33,	0,54010,109220,110768,121920,123587,125868,130580,132474,134674,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	27524157	27637319	chr12:27524157-27637319	1	+	27633396	27635175	789624	4	208,88,99,2410,	0,53994,109204,110752,
#Partially deleted in new
chr12	27524172	27691784	chr12:27524172-27691784	0	+	27650054	27691784	789624	24	193,88,87,132,93,93,115,62,85,155,116,57,61,30,172,151,129,151,112,89,123,126,189,36,	0,53979,121889,125837,130549,130970,132443,136711,140189,142993,147258,148254,149594,150019,152255,155316,155760,157373,158214,158442,163212,164125,164842,167576,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	27524173	27584418	chr12:27524173-27584418	0	+	27524173	27524173	8553170	3	192,88,294,	0,53978,59951,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr12	27524181	27695563	chr12:27524181-27695563	1	+	27647830	27692882	789624	27	184,88,87,114,132,93,93,115,62,76,155,116,57,61,30,172,151,129,151,112,89,123,126,189,180,66,2768,	0,53970,121880,123547,125828,130540,130961,132434,136702,140180,142984,147249,148245,149585,150010,152246,155307,155751,157364,158205,158433,163203,164116,164833,167567,168409,168614,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr12	27524205	27695564	chr12:27524205-27695564	1	+	27633396	27692882	789624	29	160,88,99,206,87,114,132,93,93,115,62,76,155,116,57,61,30,172,151,129,151,112,89,123,126,189,180,66,2769,	0,53946,109156,110704,121856,123523,125804,130516,130937,132410,136678,140156,142960,147225,148221,149561,149986,152222,155283,155727,157340,158181,158409,163179,164092,164809,167543,168385,168590,
#Partially deleted in new
chr12	27524219	27647977	chr12:27524219-27647977	1	+	27633396	27647884	789624	6	146,88,99,206,87,249,	0,53932,109142,110690,121842,123509,
#Partially deleted in new
chr12	27524223	27692882	chr12:27524223-27692882	1	+	27633396	27692882	789624	28	142,88,99,206,87,114,132,93,115,62,76,155,116,57,61,30,172,151,129,151,112,89,123,126,189,180,66,87,	0,53928,109138,110686,121838,123505,125786,130498,132392,136660,140138,142942,147207,148203,149543,149968,152204,155265,155709,157322,158163,158391,163161,164074,164791,167525,168367,168572,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr12	27524255	27695564	chr12:27524255-27695564	3	+	27633396	27692882	789624	30	110,88,99,206,87,114,132,93,115,33,62,85,155,116,57,61,30,172,33,151,129,151,112,89,123,126,189,180,66,2769,	0,53896,109106,110654,121806,123473,125754,130466,132360,134560,136628,140106,142910,147175,148171,149511,149936,152172,152808,155233,155677,157290,158131,158359,163129,164042,164759,167493,168335,168540,
#Partially deleted in new
chr12	27538122	27635104	chr12:27538122-27635104	0	+	27633396	27635104	789624	4	177,88,99,195,	0,40029,95239,96787,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	27547049	27552773	chr12:27547049-27552773	3	-	27547049	27547049	8553170	2	2413,226,	0,5498,
#Partially deleted in new
chr12	27592460	27594039	chr12:27592460-27594039	7	-	27592460	27592460	16724991	2	288,640,	0,939,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	27599347	27647789	chr12:27599347-27647789	0	+	27599475	27647789	789624	5	132,99,206,87,61,	0,34014,35562,46714,48381,
#Deleted in new
chr12	27608732	27609046	chr12:27608732-27609046	7	-	27608732	27608732	16724991	1	314,	0,
#Deleted in new
chr12	27654385	27657123	chr12:27654385-27657123	0	+	27654385	27654385	8553170	2	429,508,	0,2230,
#Partially deleted in new
chr12	27660933	27676557	chr12:27660933-27676557	0	+	27660933	27676557	789624	7	12,85,155,116,57,61,130,	0,3428,6232,10497,11493,12833,15494,
#Deleted in new
chr12	27676427	27677992	chr12:27676427-27677992	0	+	27676427	27676688	789624	1	1565,	0,
#Partially deleted in new
chr12	27679799	27682655	chr12:27679799-27682655	0	+	27679799	27679799	8553170	4	262,151,112,41,	0,1746,2587,2815,
#Partially deleted in new
chr12	27682623	27693127	chr12:27682623-27693127	0	+	27682623	27692882	789624	6	80,126,189,180,66,332,	0,5674,6391,9125,9967,10172,
#Deleted in new
chr12	27688188	27689203	chr12:27688188-27689203	0	+	27688188	27688188	8553170	2	235,189,	0,826,
#Partially deleted in new
chr12	27696387	27710770	chr12:27696387-27710770	3	-	27696387	27696387	8553170	4	591,160,187,172,	0,7073,8350,14211,
#Deleted in new
chr12	27696518	27697596	chr12:27696518-27697596	3	+	27696562	27697273	789624	1	1078,	0,
#Partially deleted in new
chr12	27696900	27710731	chr12:27696900-27710731	0	-	27696900	27696900	8553170	3	398,160,133,	0,6560,13698,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	27700065	27700574	chr12:27700065-27700574	3	+	27700065	27700065	8553170	1	509,	0,
#Deleted in new
chr12	27702337	27702906	chr12:27702337-27702906	7	+	27702337	27702337	16724991	1	569,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	27704567	27708365	chr12:27704567-27708365	3	+	27704567	27704567	8553170	2	123,306,	0,3492,
#Partially deleted in new
chr12	27710772	27756295	chr12:27710772-27756295	3	+	27710843	27755450	0	8	183,41,168,61,140,110,70,1115,	0,4007,5518,9035,13274,24674,26766,44408,
#Partially deleted in new
chr12	27710821	27735500	chr12:27710821-27735500	0	+	27710843	27716304	789624	5	134,168,61,140,54,	0,5469,8986,13225,24625,
#Partially deleted in new
chr12	27710834	27756294	chr12:27710834-27756294	1	+	27710843	27737601	0	7	121,41,168,61,140,70,1114,	0,3945,5456,8973,13212,26704,44346,
#Partially deleted in new
chr12	27710846	27755537	chr12:27710846-27755537	0	+	27710846	27755188	789624	2	109,357,	0,44334,
#Partially deleted in new
chr12	27710886	27737608	chr12:27710886-27737608	0	+	27710886	27725585	789624	8	69,41,168,61,140,91,110,70,	0,3893,5404,8921,13160,14690,24560,26652,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	27752873	27752986	chr12:27752873-27752986	3	+	27752873	27752873	8553170	1	113,	0,
#Partially deleted in new
chr12	27762737	27771276	chr12:27762737-27771276	3	-	27762737	27771276	789624	3	659,135,229,	0,3927,8310,
#Partially deleted in new
chr12	27779820	27781067	chr12:27779820-27781067	3	-	27779820	27779820	8553170	2	110,569,	0,678,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	27780019	27803040	chr12:27780019-27803040	3	+	27780330	27798166	789624	3	1183,194,5326,	0,11688,17695,
#Partially deleted in new
chr12	27780047	27798156	chr12:27780047-27798156	0	+	27780330	27797290	789624	4	1155,194,103,442,	0,11660,17199,17667,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	27780286	27800703	chr12:27780286-27800703	0	+	27780286	27780286	8553170	3	95,194,2989,	0,11421,17428,
#Partially deleted in new
chr12	27780866	27792143	chr12:27780866-27792143	0	+	27780866	27791909	789624	2	336,436,	0,10841,
#Partially deleted in new
chr12	27787634	27791926	chr12:27787634-27791926	0	+	27787634	27787634	8553170	2	574,219,	0,4073,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	27798640	27800708	chr12:27798640-27800708	3	-	27798640	27798640	8553170	2	163,28,	0,2040,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	27806081	27806390	chr12:27806081-27806390	3	-	27806081	27806081	8553170	1	309,	0,
#Deleted in new
chr12	27824206	27824382	chr12:27824206-27824382	3	-	27824206	27824206	8553170	1	176,	0,
#Deleted in new
chr12	27935522	27935749	chr12:27935522-27935749	7	-	27935522	27935522	16724991	1	227,	0,
#Partially deleted in new
chr12	27958083	27971970	chr12:27958083-27971970	1	-	27958558	27969494	0	5	485,423,123,243,44,	0,5264,11310,11941,13843,
#Partially deleted in new
chr12	27958089	27972705	chr12:27958089-27972705	1	-	27958558	27969494	0	6	479,423,123,243,93,183,	0,5258,11304,11935,13837,14433,
#Partially deleted in new
chr12	27958269	27969561	chr12:27958269-27969561	1	-	27958558	27969494	0	3	299,423,168,	0,5078,11124,
#Partially deleted in new
chr12	27958516	27969813	chr12:27958516-27969813	3	+	27958516	27958516	8553170	2	90,702,	0,10595,
#Deleted in new
chr12	27961667	27969494	chr12:27961667-27969494	1	-	27961891	27969494	0	3	330,423,101,	0,1680,7726,
#Deleted in new
chr12	27962321	27971983	chr12:27962321-27971983	3	-	27963343	27969494	0	4	1449,123,243,57,	0,7072,7703,9605,
#Deleted in new
chr12	27962327	27970349	chr12:27962327-27970349	1	-	27963343	27969494	0	3	1443,123,325,	0,7066,7697,
#Deleted in new
chr12	27962586	27970047	chr12:27962586-27970047	1	-	27963343	27969494	0	3	1184,123,367,	0,6807,7094,
#Deleted in new
chr12	27963355	27970277	chr12:27963355-27970277	0	-	27963355	27969494	789624	3	415,123,208,	0,6038,6714,
#Deleted in new
chr12	27963562	27970134	chr12:27963562-27970134	0	-	27963562	27970010	789624	3	208,123,126,	0,5831,6446,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	28133248	28452527	chr12:28133248-28452527	0	+	28183797	28452527	789624	6	84,114,108,93,69,50,	0,50477,258055,316912,317101,319229,
#Partially deleted in new
chr12	28164957	28165662	chr12:28164957-28165662	7	+	28164957	28164957	16724991	2	117,437,	0,268,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	28179276	28549191	chr12:28179276-28549191	0	+	28257215	28304684	789624	15	68,114,44,79,86,158,204,105,78,108,93,69,177,114,129,	0,4449,77925,80087,125349,126372,127465,128368,183161,212027,270884,271073,273201,304775,369786,
#Deleted in new
chr12	28185624	28186190	chr12:28185624-28186190	3	-	28185624	28185624	8553170	1	566,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	28188329	28190738	chr12:28188329-28190738	1	-	28188329	28188329	8553170	1	2409,	0,
#Partially deleted in new
chr12	28190426	28550166	chr12:28190426-28550166	1	+	28257215	28549173	0	12	215,44,79,158,204,105,78,93,69,177,114,1104,	0,66775,68937,115222,116315,117218,172011,259734,259923,262051,293625,358636,
#Partially deleted in new
chr12	28190437	28452636	chr12:28190437-28452636	0	+	28257215	28452636	789624	11	204,44,79,158,204,105,78,108,93,69,159,	0,66764,68926,115211,116304,117207,172000,200866,259723,259912,262040,
#Partially deleted in new
chr12	28190443	28307749	chr12:28190443-28307749	0	+	28190443	28190443	8553170	4	198,158,204,105,	0,115205,116298,117201,
#Partially deleted in new
chr12	28190445	28550166	chr12:28190445-28550166	3	+	28257215	28549173	0	16	196,67,60,82,44,79,158,204,105,78,108,93,69,177,114,1104,	0,35349,35694,65135,66756,68918,115203,116296,117199,171992,200858,259715,259904,262032,293606,358617,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	28190465	28255837	chr12:28190465-28255837	0	+	28190465	28190465	8553170	5	176,114,67,60,276,	0,8477,35329,35674,65096,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	28191244	28306749	chr12:28191244-28306749	0	+	28257215	28306749	789624	7	90,114,82,44,79,158,8,	0,7698,64336,65957,68119,114404,115497,
#Deleted in new
chr12	28236226	28236828	chr12:28236226-28236828	3	+	28236226	28236226	8553170	1	602,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	28256003	28549240	chr12:28256003-28549240	0	+	28257215	28412795	789624	14	75,44,79,158,204,105,78,108,185,93,69,177,114,178,	0,1198,3360,49645,50738,51641,106434,135300,156750,194157,194346,196474,228048,293059,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	28256724	28452640	chr12:28256724-28452640	0	+	28257215	28452640	789624	10	521,79,158,204,105,78,108,93,69,163,	0,2639,48924,50017,50920,105713,134579,193436,193625,195753,
#Partially deleted in new
chr12	28257199	28550165	chr12:28257199-28550165	1	+	28257215	28549173	0	12	46,79,158,204,105,78,108,93,69,177,114,1103,	0,2164,48449,49542,50445,105238,134104,192961,193150,195278,226852,291863,
#Partially deleted in new
chr12	28268602	28549194	chr12:28268602-28549194	0	+	28268602	28268602	8553170	12	115,86,158,204,105,78,108,93,69,177,114,132,	0,36023,37046,38139,39042,93835,122701,181558,181747,183875,215449,280460,
#Partially deleted in new
chr12	28302633	28450259	chr12:28302633-28450259	0	+	28302633	28302633	8553170	8	178,86,131,204,105,78,108,99,	0,1992,3015,4108,5011,59804,88670,147527,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	28319334	28319463	chr12:28319334-28319463	3	-	28319334	28319334	8553170	1	129,	0,
#Partially deleted in new
chr12	28450397	28484229	chr12:28450397-28484229	0	+	28450397	28484180	789624	3	21,177,178,	0,2080,33654,
#Partially deleted in new
chr12	28452541	28573446	chr12:28452541-28573446	0	+	28452541	28573312	789624	4	113,114,68,207,	0,31510,96521,120698,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	28505393	28505528	chr12:28505393-28505528	7	+	28505393	28505393	16724991	1	135,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	28549062	28579942	chr12:28549062-28579942	0	+	28549062	28571241	789624	4	68,47,99,91,	0,22154,24177,30789,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	28549062	28579943	chr12:28549062-28579943	0	+	28549062	28573312	789624	3	68,99,92,	0,24177,30789,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	28549062	28573859	chr12:28549062-28573859	0	+	28549062	28571241	789624	3	68,47,620,	0,22154,24177,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	28549063	28579950	chr12:28549063-28579950	0	+	28549063	28579867	789624	2	67,99,	0,30788,
#Deleted in new
chr12	28564677	28565141	chr12:28564677-28565141	7	-	28564677	28564677	16724991	1	464,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	28579338	28581511	chr12:28579338-28581511	0	+	28579338	28579338	8553170	1	2173,	0,
#Partially deleted in new
chr12	28821974	28825831	chr12:28821974-28825831	3	-	28821974	28821974	8553170	2	299,134,	0,3723,
#Deleted in new
chr12	28978583	28978685	chr12:28978583-28978685	7	+	28978583	28978583	16724991	1	102,	0,
#Partially deleted in new
chr12	29149102	29297078	chr12:29149102-29297078	0	+	29293401	29297078	789624	3	305,176,58,	0,144197,147918,
#Partially deleted in new
chr12	29149199	29335616	chr12:29149199-29335616	3	+	29270449	29333794	789624	12	208,227,176,180,178,45,119,68,172,130,128,1985,	0,121212,144100,147821,158458,159986,161828,162683,167641,172595,183400,184432,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	29149209	29172050	chr12:29149209-29172050	0	+	29149209	29149209	8553170	2	198,673,	0,22168,
#Partially deleted in new
chr12	29149252	29297196	chr12:29149252-29297196	0	+	29149252	29149252	8553170	3	155,227,176,	0,121159,147768,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	29149319	29151874	chr12:29149319-29151874	0	+	29149319	29149319	8553170	2	88,479,	0,2076,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	29156447	29156991	chr12:29156447-29156991	3	-	29156447	29156447	8553170	1	544,	0,
#Partially deleted in new
chr12	29223664	29334073	chr12:29223664-29334073	1	+	29270449	29333794	789624	12	230,227,176,180,178,45,119,68,172,130,128,442,	0,46747,69635,73356,83993,85521,87363,88218,93176,98130,108935,109967,
#Partially deleted in new
chr12	29223744	29334072	chr12:29223744-29334072	1	+	29293401	29333794	789624	11	150,176,180,178,45,119,68,172,130,128,441,	0,69555,73276,83913,85441,87283,88138,93096,98050,108855,109887,
#Partially deleted in new
chr12	29270448	29307835	chr12:29270448-29307835	0	+	29270449	29291430	789624	5	190,79,176,180,178,	0,20967,22851,26572,37209,
#Deleted in new
chr12	29277396	29277882	chr12:29277396-29277882	3	-	29277396	29277396	8553170	1	486,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	29280417	29317848	chr12:29280417-29317848	3	-	29280417	29280417	789624	7	1125,197,114,475,195,133,141,	0,1746,11797,12648,27432,29353,37290,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	29301631	29307969	chr12:29301631-29307969	0	-	29301631	29301631	8553170	2	433,120,	0,6218,
#Partially deleted in new
chr12	29321903	29340980	chr12:29321903-29340980	0	+	29321903	29340813	789624	4	21,128,103,173,	0,10696,11728,18904,
#Deleted in new
chr12	29331433	29331936	chr12:29331433-29331936	3	-	29331433	29331433	8553170	1	503,	0,
#Partially deleted in new
chr12	29332687	29334072	chr12:29332687-29334072	0	+	29332687	29332872	789624	3	40,64,441,	0,157,944,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	29332732	29333383	chr12:29332732-29333383	3	-	29332732	29332732	8553170	1	651,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	29337351	29381153	chr12:29337351-29381153	3	-	29341155	29371633	789624	14	3867,83,163,98,99,56,96,102,41,71,47,109,143,39,	0,4382,5768,8091,11727,12661,19030,20271,24293,29525,30889,32762,34176,43763,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	29337355	29371661	chr12:29337355-29371661	1	-	29341155	29371661	789624	14	3863,83,163,98,99,56,96,102,41,71,47,109,85,48,	0,4378,5764,8087,11723,12657,19026,20267,24289,29521,30885,32758,34172,34258,
#Partially deleted in new
chr12	29340856	29343282	chr12:29340856-29343282	0	-	29341786	29343282	789624	3	362,83,120,	0,877,2306,
#Partially deleted in new
chr12	29341017	29350068	chr12:29341017-29350068	0	-	29341172	29350068	789624	6	201,28,163,98,99,56,	0,716,2102,4425,8061,8995,
#Partially deleted in new
chr12	29341019	29357668	chr12:29341019-29357668	0	-	29341155	29357668	789624	7	199,83,163,98,80,96,46,	0,714,2100,4423,8059,15362,16603,
#Partially deleted in new
chr12	29341032	29341865	chr12:29341032-29341865	0	-	29341032	29341032	8553170	2	186,132,	0,701,
#Partially deleted in new
chr12	29343244	29350068	chr12:29343244-29350068	0	-	29345540	29350068	789624	4	38,115,99,56,	0,2198,5834,6768,
#Partially deleted in new
chr12	29349100	29381161	chr12:29349100-29381161	0	-	29349100	29371633	789624	9	77,56,102,41,71,47,109,143,47,	0,912,8522,12544,17776,19140,21013,22427,32014,
#Partially deleted in new
chr12	29349144	29381150	chr12:29349144-29381150	0	-	29349144	29371633	789624	10	33,56,96,102,41,71,47,109,143,576,	0,868,7237,8478,12500,17732,19096,20969,22383,31430,
#Partially deleted in new
chr12	29356381	29381175	chr12:29356381-29381175	0	-	29356381	29371633	789624	8	96,102,41,71,47,55,143,61,	0,1241,5263,10495,11859,13732,15146,24733,
#Partially deleted in new
chr12	29356427	29381189	chr12:29356427-29381189	0	-	29356427	29371633	789624	9	50,102,41,71,47,109,143,57,75,	0,1195,5217,10449,11813,13686,15100,16036,24687,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	29370113	29381181	chr12:29370113-29381181	0	-	29370113	29371633	789624	4	109,143,113,67,	0,1414,2741,11001,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	29389288	29394817	chr12:29389288-29394817	1	+	29389288	29389288	8553170	1	5529,	0,
#Partially deleted in new
chr12	29389293	29487288	chr12:29389293-29487288	3	+	29389293	29389293	789624	2	560,403,	0,97592,
#Partially deleted in new
chr12	29389737	29464741	chr12:29389737-29464741	1	+	29389737	29389737	8553170	3	116,201,337,	0,71996,74667,
#Partially deleted in new
chr12	29412473	29444268	chr12:29412473-29444268	0	-	29423197	29444268	789624	5	71,96,172,140,124,	0,156,10653,30887,31671,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	29425924	29487488	chr12:29425924-29487488	1	+	29425924	29425924	8553170	2	140,603,	0,60961,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr12	29427570	29497686	chr12:29427570-29497686	3	-	29427570	29497686	789624	28	78,63,107,140,136,126,225,93,157,155,196,73,181,75,129,94,131,133,44,74,103,190,152,96,173,98,119,64,	0,6180,11757,15790,16574,17707,23774,27270,27678,34283,36936,37576,44231,45458,47490,48635,49531,49770,49964,51264,58675,60122,62049,63526,67714,68610,68985,70052,
#Partially deleted in new
chr12	29440530	29444236	chr12:29440530-29444236	0	-	29440733	29444236	789624	3	214,140,92,	0,2830,3614,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr12	29500839	29784759	chr12:29500839-29784759	1	-	29506845	29768053	789624	18	6147,78,123,138,145,136,103,109,144,114,168,122,190,207,177,74,178,452,	0,11203,13642,15509,16587,17632,19778,35369,56017,71265,82567,103338,132307,250826,254869,257864,267058,283468,
#Partially deleted in new
chr12	29505598	29783897	chr12:29505598-29783897	3	-	29506845	29783751	789624	20	1388,78,123,138,145,136,103,109,144,114,168,122,190,104,82,207,177,74,178,448,	0,6444,8883,10750,11828,12873,15019,30610,51258,66506,77808,98579,127548,154281,155205,246067,250110,253105,262299,277851,
#Partially deleted in new
chr12	29505698	29783798	chr12:29505698-29783798	1	-	29506845	29783751	789624	19	1288,78,123,138,145,136,103,109,144,168,122,190,104,82,207,177,74,178,349,	0,6344,8783,10650,11728,12773,14919,30510,51158,77708,98479,127448,154181,155105,245967,250010,253005,262199,277751,
#Partially deleted in new
chr12	29505976	29519454	chr12:29505976-29519454	0	-	29505976	29505976	8553170	7	1010,78,123,138,145,127,237,	0,6066,8505,10372,11450,12504,13241,
#Partially deleted in new
chr12	29506795	29783810	chr12:29506795-29783810	1	-	29506845	29783751	789624	18	191,78,123,138,145,136,103,109,144,114,168,122,190,207,177,74,178,361,	0,5247,7686,9553,10631,11676,13822,29413,50061,65309,76611,97382,126351,244870,248913,251908,261102,276654,
#Partially deleted in new
chr12	29519730	29529974	chr12:29519730-29529974	3	+	29519730	29519730	8553170	3	90,153,106,	0,1202,10138,
#Partially deleted in new
chr12	29532567	29783046	chr12:29532567-29783046	0	-	29532567	29532567	8553170	13	3750,144,114,168,122,190,104,82,207,177,74,178,237,	0,24289,39537,50839,71610,100579,127312,128236,219098,223141,226136,235330,250242,
#Partially deleted in new
chr12	29568720	29604224	chr12:29568720-29604224	0	-	29568920	29604224	789624	4	264,114,168,47,	0,3384,14686,35457,
#Partially deleted in new
chr12	29572183	29609983	chr12:29572183-29609983	0	-	29572183	29572183	8553170	4	35,168,122,139,	0,11223,31994,37661,
#Deleted in new
chr12	29658375	29658798	chr12:29658375-29658798	7	-	29658375	29658375	16724991	1	423,	0,
#Deleted in new
chr12	30169880	30170091	chr12:30169880-30170091	7	-	30169880	30169880	16724991	1	211,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	30200982	30217916	chr12:30200982-30217916	3	+	30200982	30200982	8553170	3	126,131,314,	0,7459,16620,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	30230784	30296664	chr12:30230784-30296664	1	-	30230784	30230784	8553170	5	251,85,71,55,47,	0,1991,13550,57624,65833,
#Deleted in new
chr12	30294446	30296707	chr12:30294446-30296707	1	-	30294446	30294446	8553170	2	474,90,	0,2171,
#Partially deleted in new
chr12	30306064	30307611	chr12:30306064-30307611	7	+	30306064	30306064	16724991	2	189,96,	0,1451,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	30306430	30306524	chr12:30306430-30306524	7	-	30306430	30306430	16724991	1	94,	0,
#Deleted in new
chr12	30320833	30321617	chr12:30320833-30321617	3	+	30320833	30320833	8553170	2	65,497,	0,287,
#Partially deleted in new
chr12	30454918	30492302	chr12:30454918-30492302	7	+	30454918	30454918	16724991	3	166,114,139,	0,24257,37245,
#Partially deleted in new
chr12	30628987	30695986	chr12:30628987-30695986	3	-	30630859	30695647	789624	25	1970,117,204,206,221,96,98,126,67,126,161,166,90,117,77,100,135,85,95,90,157,159,157,82,423,	0,2907,5095,7994,10527,20149,23204,23979,27696,32153,33339,34501,36232,36741,37187,40195,41974,45002,45671,47510,51494,52671,55313,61508,66576,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr12	30630471	30677244	chr12:30630471-30677244	1	-	30630859	30676919	789624	21	486,117,204,206,221,96,98,126,67,126,161,166,90,117,77,100,135,85,95,90,349,	0,1423,3611,6510,9043,18665,21720,22495,26212,30669,31855,33017,34748,35257,35703,38711,40490,43518,44187,46026,46424,
#Partially deleted in new
chr12	30631625	30637149	chr12:30631625-30637149	0	-	30631880	30637149	789624	3	386,204,168,	0,2457,5356,
#Partially deleted in new
chr12	30669267	30677160	chr12:30669267-30677160	0	-	30669267	30677126	789624	6	15,135,85,95,90,115,	0,1694,4722,5391,7230,7778,
#Deleted in new
chr12	30680371	30681817	chr12:30680371-30681817	0	-	30680371	30681817	789624	2	267,159,	0,1287,
#Partially deleted in new
chr12	30680481	30688756	chr12:30680481-30688756	0	-	30680481	30684437	789624	4	157,159,157,64,	0,1177,3819,8211,
#Partially deleted in new
chr12	30680521	30695869	chr12:30680521-30695869	0	-	30690524	30695647	789624	5	117,159,157,53,306,	0,1137,3779,9974,15042,
#Partially deleted in new
chr12	30684300	30688746	chr12:30684300-30688746	0	-	30684300	30688456	789624	2	157,387,	0,4059,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	30684336	30688758	chr12:30684336-30688758	0	-	30684336	30684437	789624	3	121,339,66,	0,1984,4356,
#Partially deleted in new
chr12	30684434	30695111	chr12:30684434-30695111	0	-	30684434	30695010	789624	3	23,82,134,	0,6061,10543,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	30686523	30688759	chr12:30686523-30688759	0	-	30686523	30686523	8553170	2	136,400,	0,1836,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	30696120	30700220	chr12:30696120-30700220	3	+	30696120	30696120	8553170	2	1221,1072,	0,3028,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	30709551	30753659	chr12:30709551-30753659	0	-	30735153	30753659	789624	15	963,64,101,1718,1837,56,82,123,678,44,168,239,91,63,316,	0,2014,4233,5407,9527,13707,14818,16414,19096,20687,21791,25416,31464,41519,43792,
#Partially deleted in new
chr12	30709552	30754514	chr12:30709552-30754514	3	-	30709901	30753763	789624	17	918,64,101,183,169,105,56,82,123,678,44,168,83,239,87,63,1171,	0,2013,4232,5406,6955,11258,13706,14817,16413,19095,20686,21790,24076,25415,31467,41518,43791,
#Partially deleted in new
chr12	30709552	30735014	chr12:30709552-30735014	0	-	30710443	30735014	789624	16	918,64,44,101,183,169,147,105,56,82,123,678,44,168,83,47,	0,2013,2186,4232,5406,6955,9526,11258,13706,14817,16413,19095,20686,21790,24076,25415,
#Partially deleted in new
chr12	30709552	30754514	chr12:30709552-30754514	0	-	30731482	30753763	789624	17	918,64,101,183,169,147,105,56,82,123,678,44,168,239,87,63,1171,	0,2013,4232,5406,6955,9526,11258,13706,14817,16413,19095,20686,21790,25415,31467,41518,43791,
#Partially deleted in new
chr12	30709552	30751124	chr12:30709552-30751124	0	-	30731482	30751124	789624	16	918,64,101,186,169,147,105,56,82,123,678,44,168,239,87,54,	0,2013,4232,5406,6955,9526,11258,13706,14817,16413,19095,20686,21790,25415,31467,41518,
#Partially deleted in new
chr12	30709553	30754311	chr12:30709553-30754311	1	-	30710443	30753763	789624	17	961,64,101,123,169,147,56,82,123,678,44,168,83,239,87,63,968,	0,2012,4231,5405,6954,9525,13705,14816,16412,19094,20685,21789,24075,25414,31466,41517,43790,
#Partially deleted in new
chr12	30710339	30754311	chr12:30710339-30754311	1	-	30710443	30753763	789624	18	175,64,101,183,169,147,105,56,82,123,678,44,168,83,239,87,63,968,	0,1226,3445,4619,6168,8739,10471,12919,14030,15626,18308,19899,21003,23289,24628,30680,40731,43004,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	30714926	30715377	chr12:30714926-30715377	0	-	30714926	30714926	8553170	1	451,	0,
#Partially deleted in new
chr12	30716289	30728778	chr12:30716289-30728778	0	-	30716289	30716289	8553170	6	387,147,56,82,123,131,	0,2789,6969,8080,9676,12358,
#Partially deleted in new
chr12	30716622	30754951	chr12:30716622-30754951	0	-	30716622	30753520	789624	15	54,147,105,56,82,123,678,44,168,83,239,87,63,195,63,	0,2456,4188,6636,7747,9343,12025,13616,14720,17006,18345,24397,34448,36721,38266,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	30728378	30731448	chr12:30728378-30731448	0	-	30728378	30728378	8553170	3	947,44,106,	0,1860,2964,
#Partially deleted in new
chr12	30728667	30735147	chr12:30728667-30735147	0	-	30728667	30728667	8553170	3	658,44,180,	0,1571,6300,
#Partially deleted in new
chr12	30731469	30754630	chr12:30731469-30754630	0	-	30731469	30731469	8553170	5	41,239,87,63,48,	0,3498,9550,19601,23113,
#Partially deleted in new
chr12	30733659	30754939	chr12:30733659-30754939	0	-	30733659	30735167	789624	5	52,239,87,63,189,	0,1308,7360,17411,21091,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	30733706	30751655	chr12:30733706-30751655	0	-	30733706	30735167	789624	5	5,239,87,63,234,	0,1261,7313,17364,17715,
#Partially deleted in new
chr12	30734954	30754824	chr12:30734954-30754824	0	-	30734954	30734954	8553170	4	252,87,63,99,	0,6065,16116,19771,
#Partially deleted in new
chr12	30734975	30754853	chr12:30734975-30754853	0	-	30734975	30753520	789624	5	231,87,63,216,173,	0,6044,16095,18368,19705,
#Partially deleted in new
chr12	30735153	30754888	chr12:30735153-30754888	0	-	30735153	30753520	789624	5	53,87,63,216,138,	0,5866,15917,18190,19597,
#Partially deleted in new
chr12	30735175	30754860	chr12:30735175-30754860	0	-	30735175	30753520	789624	5	31,87,63,216,172,	0,5844,15895,18168,19513,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	30755073	30780739	chr12:30755073-30780739	3	+	30755073	30755073	789624	2	198,1354,	0,24312,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	30755166	30802602	chr12:30755166-30802602	3	+	30755166	30755166	8553170	5	105,171,109,68,902,	0,42978,44746,45367,46534,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	30795457	30803155	chr12:30795457-30803155	0	+	30795457	30795457	8553170	4	759,109,68,1455,	0,4455,5076,6243,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	30795670	30802317	chr12:30795670-30802317	0	+	30795670	30795670	8553170	5	141,171,109,68,617,	0,2474,4242,4863,6030,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	30795720	30802795	chr12:30795720-30802795	1	+	30795720	30795720	8553170	5	125,5,109,68,1095,	0,2590,4192,4813,5980,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	30795725	30802319	chr12:30795725-30802319	0	+	30795725	30795725	8553170	4	86,109,68,619,	0,4187,4808,5975,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	30795810	30817435	chr12:30795810-30817435	1	+	30795810	30795810	789624	5	406,171,109,68,15735,	0,2334,4102,4723,5890,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	30795947	30803176	chr12:30795947-30803176	1	+	30795947	30795947	8553170	6	82,228,171,109,68,1476,	0,1035,2197,3965,4586,5753,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	30795964	30802708	chr12:30795964-30802708	0	+	30795964	30795964	8553170	4	65,109,68,1008,	0,3948,4569,5736,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	30795982	30802321	chr12:30795982-30802321	0	+	30795982	30795982	8553170	6	234,228,171,109,68,621,	0,1000,2162,3930,4551,5718,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	30796076	30879268	chr12:30796076-30879268	3	+	30796076	30796076	8553170	3	140,106,597,	0,3839,82595,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	30796111	30801094	chr12:30796111-30801094	0	+	30796111	30796111	8553170	3	105,171,1182,	0,2033,3801,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	30796190	30802308	chr12:30796190-30802308	0	+	30796190	30796190	8553170	5	26,228,109,68,608,	0,792,3722,4343,5510,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	30796309	30806648	chr12:30796309-30806648	0	+	30796309	30796309	8553170	4	242,109,68,4948,	0,3603,4224,5391,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	30800210	30801997	chr12:30800210-30801997	0	+	30800210	30800210	8553170	2	391,297,	0,1490,
#Deleted in new
chr12	30861920	30862179	chr12:30861920-30862179	7	+	30861920	30861920	16724991	1	259,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	30926427	30955260	chr12:30926427-30955260	1	+	30953991	30954117	789624	2	369,1280,	0,27553,
#Partially deleted in new
chr12	30926747	30992151	chr12:30926747-30992151	1	+	30953991	30991915	789624	8	49,95,192,75,105,159,87,296,	0,27233,37078,51813,52818,55784,56316,65108,
#Partially deleted in new
chr12	30926903	30992123	chr12:30926903-30992123	1	+	30963954	30991915	789624	7	102,192,75,105,159,87,268,	0,36922,51657,52662,55628,56160,64952,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	30926957	30996599	chr12:30926957-30996599	3	+	30953991	30991915	789624	8	48,95,192,75,105,159,87,4744,	0,27023,36868,51603,52608,55574,56106,64898,
#Deleted in new
chr12	30978307	30978936	chr12:30978307-30978936	5	-	30978307	30978307	16724991	1	629,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	30978363	31005920	chr12:30978363-31005920	4	-	30978363	30978363	16724991	6	312,106,66,93,118,124,	0,8370,17623,19047,20823,27433,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	30997037	31006010	chr12:30997037-31006010	7	-	30997037	30997037	16724991	4	198,93,118,214,	0,373,2149,8759,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	30997253	31005986	chr12:30997253-31005986	4	-	30997253	30997253	16724991	3	250,118,190,	0,1933,8543,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	30998915	31005972	chr12:30998915-31005972	4	-	30998915	30998915	16724991	2	389,176,	0,6881,
#Deleted in new
chr12	31005776	31005848	chr12:31005776-31005848	5	-	31005776	31005776	16724991	1	72,	0,
#Partially deleted in new
chr12	31012502	31015667	chr12:31012502-31015667	7	+	31012502	31012502	16724991	2	252,96,	0,3069,
#Deleted in new
chr12	31015442	31015806	chr12:31015442-31015806	5	+	31015442	31015442	16724991	1	364,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	31020762	31073847	chr12:31020762-31073847	3	-	31020762	31020762	789624	3	1267,111,653,	0,39897,52432,
#Partially deleted in new
chr12	31050915	31060750	chr12:31050915-31060750	0	-	31050915	31050915	8553170	2	480,91,	0,9744,
#Partially deleted in new
chr12	31060589	31073507	chr12:31060589-31073507	0	-	31060589	31060589	8553170	2	181,313,	0,12605,
#Partially deleted in new
chr12	31073844	31103943	chr12:31073844-31103943	1	+	31078393	31103836	789624	27	247,148,249,87,158,46,108,88,209,153,47,80,45,68,39,109,132,113,73,104,150,69,101,85,79,155,137,	0,4545,9968,10738,11124,14093,15199,15558,16041,17874,19001,19400,20745,20910,22496,22792,23014,24040,26790,27182,27988,28398,28582,29091,29472,29732,29962,
#Partially deleted in new
chr12	31073859	31104791	chr12:31073859-31104791	1	+	31078471	31103836	789624	27	110,75,249,87,158,46,108,88,209,153,47,80,45,68,39,109,132,113,73,104,150,69,101,85,79,155,985,	0,4603,9953,10723,11109,14078,15184,15543,16026,17859,18986,19385,20730,20895,22481,22777,22999,24025,26775,27167,27973,28383,28567,29076,29457,29717,29947,
#Partially deleted in new
chr12	31073859	31094633	chr12:31073859-31094633	0	+	31078393	31090008	789624	12	232,148,249,87,158,46,108,209,153,47,80,44,	0,4530,9953,10723,11109,14078,15184,16026,17859,18986,19385,20730,
#Partially deleted in new
chr12	31073867	31089999	chr12:31073867-31089999	0	+	31078393	31089999	789624	8	224,148,249,158,46,108,88,114,	0,4522,9945,11101,14070,15176,15535,16018,
#Partially deleted in new
chr12	31073875	31104791	chr12:31073875-31104791	0	+	31078393	31087978	789624	27	216,148,249,87,158,188,46,108,88,204,153,47,80,45,68,39,109,132,113,73,132,150,69,101,85,79,1215,	0,4514,9937,10707,11093,12149,14062,15168,15527,16015,17843,18970,19369,20714,20879,22465,22761,22983,24009,26759,27123,27957,28367,28551,29060,29441,29701,
#Partially deleted in new
chr12	31073878	31091771	chr12:31073878-31091771	0	+	31078471	31089904	789624	10	91,75,249,87,158,46,108,88,255,53,	0,4584,9934,10704,11090,14059,15165,15524,15961,17840,
#Partially deleted in new
chr12	31073881	31104791	chr12:31073881-31104791	0	+	31078393	31089904	789624	22	210,148,249,87,158,46,108,88,204,153,47,80,45,68,39,109,132,113,148,104,150,985,	0,4508,9931,10701,11087,14056,15162,15521,16009,17837,18964,19363,20708,20873,22459,22755,22977,24003,26678,27145,27951,29925,
#Partially deleted in new
chr12	31073890	31104136	chr12:31073890-31104136	0	+	31073890	31073890	8553170	26	201,148,249,87,158,46,108,692,153,47,80,45,68,39,109,132,113,73,86,150,69,101,85,79,155,330,	0,4499,9922,10692,11078,14047,15153,15512,17828,18955,19354,20699,20864,22450,22746,22968,23994,26744,27154,27942,28352,28536,29045,29426,29686,29916,
#Partially deleted in new
chr12	31073891	31089111	chr12:31073891-31089111	0	+	31078471	31089111	789624	7	200,75,249,87,158,46,68,	0,4571,9921,10691,11077,14046,15152,
#Partially deleted in new
chr12	31073893	31104791	chr12:31073893-31104791	1	+	31078393	31104033	789624	27	76,148,249,87,158,46,108,88,209,153,47,80,45,68,39,109,132,113,73,104,150,69,101,85,74,155,985,	0,4496,9919,10689,11075,14044,15150,15509,15992,17825,18952,19351,20696,20861,22447,22743,22965,23991,26741,27133,27939,28349,28533,29042,29428,29683,29913,
#Partially deleted in new
chr12	31073897	31104791	chr12:31073897-31104791	3	+	31078393	31103836	789624	26	194,148,249,87,158,46,108,88,209,153,47,80,45,68,39,109,132,113,73,104,69,101,85,79,155,985,	0,4492,9915,10685,11071,14040,15146,15505,15988,17821,18948,19347,20692,20857,22443,22739,22961,23987,26737,27129,28345,28529,29038,29419,29679,29909,
#Partially deleted in new
chr12	31073901	31089883	chr12:31073901-31089883	0	+	31073901	31073901	8553170	7	190,148,249,87,158,46,840,	0,4488,9911,10681,11067,14036,15142,
#Partially deleted in new
chr12	31073908	31085068	chr12:31073908-31085068	0	+	31078393	31084059	789624	5	183,148,95,87,100,	0,4481,10058,10674,11060,
#Partially deleted in new
chr12	31074219	31089618	chr12:31074219-31089618	0	+	31078393	31084833	789624	9	108,148,249,87,114,117,46,108,216,	0,4170,9593,10363,10578,10790,13718,14824,15183,
#Partially deleted in new
chr12	31074263	31084656	chr12:31074263-31084656	0	+	31078184	31084656	789624	5	64,344,148,249,74,	0,3681,4126,9549,10319,
#Deleted in new
chr12	31076866	31077016	chr12:31076866-31077016	3	-	31076866	31076866	8553170	1	150,	0,
#Partially deleted in new
chr12	31078519	31089130	chr12:31078519-31089130	0	+	31078519	31087946	789624	4	18,249,46,87,	0,5293,9418,10524,
#Partially deleted in new
chr12	31083827	31103864	chr12:31083827-31103864	0	+	31083827	31102497	789624	6	49,77,85,74,155,58,	0,18623,19108,19494,19749,19979,
#Deleted in new
chr12	31087575	31089681	chr12:31087575-31089681	0	+	31087575	31087575	8553170	3	408,108,279,	0,1468,1827,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	31087644	31093720	chr12:31087644-31093720	0	+	31087644	31087644	8553170	5	339,1051,153,47,476,	0,1399,4074,5201,5600,
#Deleted in new
chr12	31089068	31091273	chr12:31089068-31091273	0	+	31089068	31089068	8553170	4	83,88,209,237,	0,334,817,1968,
#Partially deleted in new
chr12	31091552	31096989	chr12:31091552-31096989	0	+	31091552	31091552	8553170	8	319,47,80,45,68,39,109,131,	0,1293,1692,3037,3202,4788,5084,5306,
#Partially deleted in new
chr12	31092861	31100594	chr12:31092861-31100594	0	+	31092861	31092861	8553170	9	31,80,45,68,39,109,132,113,35,	0,383,1728,1893,3479,3775,3997,5023,7698,
#Deleted in new
chr12	31094294	31096873	chr12:31094294-31096873	0	+	31094294	31094294	8553170	5	340,68,39,109,15,	0,460,2046,2342,2564,
#Partially deleted in new
chr12	31096634	31100847	chr12:31096634-31100847	0	+	31096634	31096634	8553170	4	111,132,113,213,	0,224,1250,4000,
#Partially deleted in new
chr12	31096913	31102729	chr12:31096913-31102729	0	+	31096913	31096913	8553170	4	77,113,69,303,	0,971,5329,5513,
#Deleted in new
chr12	31100406	31101475	chr12:31100406-31101475	0	+	31100406	31100406	8553170	2	301,449,	0,620,
#Deleted in new
chr12	31101512	31102261	chr12:31101512-31102261	0	+	31101512	31101512	8553170	2	470,19,	0,730,
#Deleted in new
chr12	31102213	31103218	chr12:31102213-31103218	0	+	31102213	31102213	8553170	3	98,101,283,	0,213,722,
#Deleted in new
chr12	31102267	31104269	chr12:31102267-31104269	0	+	31102267	31103836	789624	6	68,101,85,79,155,463,	0,159,668,1049,1309,1539,
#Deleted in new
chr12	31102267	31104005	chr12:31102267-31104005	0	+	31102267	31103615	789624	5	44,101,46,155,199,	0,159,707,1309,1539,
#Deleted in new
chr12	31105104	31106830	chr12:31105104-31106830	7	-	31105104	31105104	16724991	6	115,76,118,142,133,91,	0,258,666,918,1227,1635,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	31111651	31117471	chr12:31111651-31117471	5	-	31111651	31111651	16724991	8	158,177,103,69,91,501,113,52,	0,460,1329,2744,3185,3551,4705,5768,
#Partially deleted in new
chr12	31111656	31116460	chr12:31111656-31116460	4	-	31111656	31111656	16724991	5	153,103,69,91,104,	0,1324,2739,3180,4700,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	31111658	31119110	chr12:31111658-31119110	4	-	31111658	31111658	16724991	7	630,103,69,91,113,61,148,	0,1322,2737,3178,4698,5761,7304,
#Partially deleted in new
chr12	31112235	31201235	chr12:31112235-31201235	7	-	31112235	31112235	16724991	46	53,103,69,91,113,157,40,212,166,75,157,82,174,84,52,119,130,229,93,149,171,150,146,55,228,159,110,121,118,85,169,97,171,150,145,61,231,159,110,115,118,85,169,21,157,184,	0,745,2160,2601,4121,4805,12095,13135,14111,15415,17483,18272,19115,20009,20881,21643,23344,23718,24385,25881,26837,32669,33174,34126,35659,36579,37079,37937,42097,45750,46650,58172,59200,60087,60580,61278,65423,66567,70978,73350,76333,81776,82541,83285,88187,88816,
#Deleted in new
chr12	31131454	31135627	chr12:31131454-31135627	4	-	31131454	31131454	16724991	5	70,84,52,119,48,	0,790,1662,2424,4125,
#Partially deleted in new
chr12	31158896	31172377	chr12:31158896-31172377	4	-	31158896	31158896	16724991	4	158,97,171,55,	0,11511,12539,13426,
#Partially deleted in new
chr12	31172905	31200478	chr12:31172905-31200478	4	-	31172905	31172905	16724991	11	55,61,75,231,159,115,118,85,169,21,56,	0,608,4104,4753,5897,12680,15663,21106,21871,22615,27517,
#Partially deleted in new
chr12	31244439	31244685	chr12:31244439-31244685	7	+	31244439	31244439	16724991	1	246,	0,
#Partially deleted in new
chr12	31251991	31252597	chr12:31251991-31252597	7	-	31251991	31251991	16724991	1	606,	0,
#Partially deleted in new
chr12	31254360	31254445	chr12:31254360-31254445	7	-	31254360	31254360	16724991	1	85,	0,
#Partially deleted in new
chr12	31280421	31280895	chr12:31280421-31280895	3	-	31280421	31280421	8553170	1	474,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	31280583	31326372	chr12:31280583-31326372	3	-	31282711	31298204	789624	6	2288,151,127,100,148,349,	0,7050,13221,14650,17493,45440,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	31280583	31298521	chr12:31280583-31298521	0	-	31280583	31280583	8553170	5	2288,151,127,100,445,	0,7050,13221,14650,17493,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	31280583	31326116	chr12:31280583-31326116	1	-	31282711	31287695	789624	3	2288,151,93,	0,7050,45440,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	31282061	31324162	chr12:31282061-31324162	1	-	31282711	31298204	789624	6	810,151,127,100,148,219,	0,5572,11743,13172,16015,41882,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	31282638	31298175	chr12:31282638-31298175	0	-	31296965	31298175	789624	6	233,151,127,100,135,99,	0,4995,11166,12595,14271,15438,
#Partially deleted in new
chr12	31282687	31326199	chr12:31282687-31326199	1	-	31282711	31287695	789624	5	184,151,127,100,176,	0,4946,11117,12546,43336,
#Partially deleted in new
chr12	31287736	31327058	chr12:31287736-31327058	0	-	31287736	31298204	789624	5	48,127,100,148,36,	0,6068,7497,10340,39286,
#Partially deleted in new
chr12	31287759	31325494	chr12:31287759-31325494	0	-	31287759	31298204	789624	5	25,127,100,148,269,	0,6045,7474,10317,37466,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	31303494	31326128	chr12:31303494-31326128	0	-	31303494	31303494	8553170	2	1629,105,	0,22529,
#Partially deleted in new
chr12	31311616	31312029	chr12:31311616-31312029	7	+	31311616	31311616	16724991	2	213,103,	0,310,
#Deleted in new
chr12	31324315	31325829	chr12:31324315-31325829	3	+	31324315	31324315	789624	1	1514,	0,
#Partially deleted in new
chr12	31363480	31369301	chr12:31363480-31369301	3	-	31363480	31363480	789624	2	315,553,	0,5268,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	31366287	31366366	chr12:31366287-31366366	3	+	31366287	31366287	8553170	1	79,	0,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr12	31382222	31591097	chr12:31382222-31591097	3	-	31387602	31590832	789624	21	5564,175,127,83,188,119,146,122,129,82,79,153,132,94,151,232,537,188,667,110,392,	0,7101,10044,10391,15952,17431,20275,27040,31213,33144,41374,42312,44070,50932,60552,65315,69717,77971,97366,113587,208483,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr12	31387392	31590442	chr12:31387392-31590442	1	-	31387602	31500558	789624	23	394,175,127,83,188,119,146,122,129,82,79,153,132,94,151,232,537,188,667,110,66,260,57,	0,1931,4874,5221,10782,12261,15105,21870,26043,27974,36204,37142,38900,45762,55382,60145,64547,72801,92196,108417,112213,113000,202993,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	31396389	31396501	chr12:31396389-31396501	3	+	31396389	31396389	8553170	1	112,	0,
#Partially deleted in new
chr12	31424568	31426751	chr12:31424568-31426751	0	-	31424568	31424568	8553170	2	119,459,	0,1724,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	31432374	31591012	chr12:31432374-31591012	1	-	31433109	31590832	789624	9	874,151,232,537,188,667,110,66,307,	0,10400,15163,19565,27819,47214,63435,67231,158331,
#Deleted in new
chr12	31443791	31444208	chr12:31443791-31444208	3	-	31443791	31443791	8553170	1	417,	0,
#Partially deleted in new
chr12	31451701	31495902	chr12:31451701-31495902	0	-	31451810	31495902	789624	4	775,188,667,93,	0,8492,27887,44108,
#Partially deleted in new
chr12	31460238	31591018	chr12:31460238-31591018	0	-	31460238	31460238	8553170	3	143,110,313,	0,35571,130467,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	31465061	31465842	chr12:31465061-31465842	7	+	31465061	31465061	16724991	1	781,	0,
#Deleted in new
chr12	31477505	31477987	chr12:31477505-31477987	7	+	31477505	31477505	16724991	1	482,	0,
#Partially deleted in new
chr12	31480128	31590999	chr12:31480128-31590999	0	-	31540966	31590832	789624	4	127,110,112,294,	0,15681,60791,110577,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	31506302	31506404	chr12:31506302-31506404	3	-	31506302	31506302	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	31534714	31535247	chr12:31534714-31535247	7	-	31534714	31534714	16724991	1	533,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	31589922	31615351	chr12:31589922-31615351	0	+	31589922	31589922	789624	3	197,175,192,	0,11757,25237,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	31591311	31615666	chr12:31591311-31615666	3	+	31591311	31591311	8553170	3	429,170,507,	0,10373,23848,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	31594092	31594206	chr12:31594092-31594206	3	-	31594092	31594092	8553170	1	114,	0,
#Partially deleted in new
chr12	31597113	31597409	chr12:31597113-31597409	7	-	31597113	31597113	16724991	1	296,	0,
#Deleted in new
chr12	31615770	31616439	chr12:31615770-31616439	7	-	31615770	31615770	16724991	1	669,	0,
#Partially deleted in new
chr12	31647159	31668075	chr12:31647159-31668075	3	+	31661953	31667990	789624	4	96,427,131,429,	0,14681,18927,20487,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	31659186	31668967	chr12:31659186-31668967	1	+	31661953	31667990	789624	4	176,427,131,1321,	0,2654,6900,8460,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	31659687	31673114	chr12:31659687-31673114	1	+	31661953	31667990	789624	4	102,427,131,5468,	0,2153,6399,7959,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	31659687	31668380	chr12:31659687-31668380	1	+	31661953	31667990	789624	5	382,188,427,131,734,	0,1108,2153,6399,7959,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	31659710	31662169	chr12:31659710-31662169	0	+	31661953	31662169	789624	2	225,329,	0,2130,
#Partially deleted in new
chr12	31661936	31668382	chr12:31661936-31668382	1	+	31661953	31667677	789624	2	331,736,	0,5710,
#Partially deleted in new
chr12	31671136	31729174	chr12:31671136-31729174	3	-	31672303	31729008	789624	7	1241,112,57,218,145,133,204,	0,17870,26224,26603,30726,38156,57834,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	31671944	31729010	chr12:31671944-31729010	1	-	31672303	31709409	789624	10	433,112,57,218,145,133,191,70,139,40,	0,17062,25416,25795,29918,37348,42496,42937,47273,57026,
#Partially deleted in new
chr12	31672169	31729110	chr12:31672169-31729110	1	-	31672303	31689109	789624	6	208,112,57,218,145,140,	0,16837,25191,25570,29693,56801,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	31672277	31729021	chr12:31672277-31729021	1	-	31672303	31709409	789624	9	100,112,57,218,145,133,70,139,51,	0,16729,25083,25462,29585,37015,42604,46940,56693,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	31673551	31729021	chr12:31673551-31729021	1	-	31673633	31689109	789624	8	87,112,57,218,145,70,139,51,	0,15455,23809,24188,28311,41330,45666,55419,
#Partially deleted in new
chr12	31689006	31729121	chr12:31689006-31729121	0	-	31689006	31709409	789624	6	112,57,218,145,133,131,	0,8354,8733,12856,20286,39984,
#Partially deleted in new
chr12	31701862	31729019	chr12:31701862-31729019	0	-	31701862	31709409	789624	4	145,133,70,49,	0,7430,13019,27108,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	31701867	31714951	chr12:31701867-31714951	0	-	31701867	31709409	789624	4	124,76,133,70,	0,7224,7425,13014,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	31701998	31729021	chr12:31701998-31729021	0	-	31701998	31709409	789624	7	9,93,76,133,70,139,51,	0,6919,7093,7294,12883,17219,26972,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	31708569	31729021	chr12:31708569-31729021	0	-	31708569	31708569	8553170	4	348,115,133,51,	0,483,723,20401,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	31708957	31729057	chr12:31708957-31729057	0	-	31708957	31708957	8553170	3	210,133,87,	0,335,20013,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	31709079	31729100	chr12:31709079-31729100	0	-	31709079	31709079	8553170	5	88,133,70,139,130,	0,213,5802,10138,19891,
#Deleted in new
chr12	31715341	31715781	chr12:31715341-31715781	7	-	31715341	31715341	16724991	1	440,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	31729116	31731204	chr12:31729116-31731204	3	+	31729116	31729116	8553170	1	2088,	0,
#Deleted in new
chr12	31748099	31748240	chr12:31748099-31748240	7	-	31748099	31748099	16724991	1	141,	0,
#Deleted in new
chr12	31754719	31755121	chr12:31754719-31755121	7	+	31754719	31754719	16724991	1	402,	0,
#Deleted in new
chr12	31791184	31792241	chr12:31791184-31792241	3	-	31791758	31792166	0	1	1057,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	31802957	31803090	chr12:31802957-31803090	3	-	31802957	31802957	8553170	1	133,	0,
#Partially deleted in new
chr12	31811087	31811190	chr12:31811087-31811190	3	+	31811087	31811087	8553170	1	103,	0,
#Deleted in new
chr12	31853020	31853407	chr12:31853020-31853407	7	-	31853020	31853020	16724991	1	387,	0,
#Partially deleted in new
chr12	31877078	31887203	chr12:31877078-31887203	3	-	31877078	31877078	789624	2	815,37,	0,10088,
#Deleted in new
chr12	31893369	31893702	chr12:31893369-31893702	7	+	31893369	31893369	16724991	1	333,	0,
#Partially deleted in new
chr12	31897819	31898123	chr12:31897819-31898123	7	+	31897819	31897819	16724991	1	304,	0,
#Partially deleted in new
chr12	31948333	31948827	chr12:31948333-31948827	7	+	31948333	31948333	16724991	1	494,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	31953888	31955268	chr12:31953888-31955268	7	+	31953888	31953888	16724991	1	1380,	0,
#Partially deleted in new
chr12	31959369	31992834	chr12:31959369-31992834	0	+	31959369	31959369	8553170	3	122,95,457,	0,1407,33008,
#Partially deleted in new
chr12	31959407	31981060	chr12:31959407-31981060	0	+	31980955	31981060	789624	3	84,95,183,	0,1369,21470,
#Partially deleted in new
chr12	31959418	31993107	chr12:31959418-31993107	3	+	31980955	31992535	789624	6	73,95,168,5080,84,730,	0,1358,10770,21459,27820,32959,
#Partially deleted in new
chr12	31959437	31992941	chr12:31959437-31992941	0	+	31959437	31959437	8553170	5	54,95,168,84,564,	0,1339,10751,27801,32940,
#Partially deleted in new
chr12	31959448	31992969	chr12:31959448-31992969	0	+	31959448	31959448	8553170	4	43,95,84,592,	0,1328,27790,32929,
#Partially deleted in new
chr12	31959662	31970246	chr12:31959662-31970246	0	+	31959662	31959662	8553170	3	238,95,58,	0,1114,10526,
#Partially deleted in new
chr12	31962488	31982979	chr12:31962488-31982979	0	+	31980955	31982979	789624	3	56,168,2102,	0,7700,18389,
#Partially deleted in new
chr12	31987165	31993103	chr12:31987165-31993103	0	+	31987165	31987165	8553170	2	157,726,	0,5212,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	32000374	32001222	chr12:32000374-32001222	3	+	32000374	32000374	8553170	1	848,	0,
#Partially deleted in new
chr12	32007126	32007435	chr12:32007126-32007435	7	+	32007126	32007126	16724991	1	309,	0,
#Partially deleted in new
chr12	32072733	32072880	chr12:32072733-32072880	7	+	32072733	32072733	16724991	1	147,	0,
#Partially deleted in new
chr12	32100484	32100735	chr12:32100484-32100735	7	-	32100484	32100484	16724991	1	251,	0,
#Deleted in new
chr12	32106834	32108796	chr12:32106834-32108796	1	+	32107331	32107613	789624	1	1962,	0,
#Deleted in new
chr12	32106884	32108329	chr12:32106884-32108329	1	+	32107331	32107688	789624	2	660,668,	0,777,
#Partially deleted in new
chr12	32107150	32383633	chr12:32107150-32383633	1	+	32107331	32367717	789624	9	394,213,153,426,1095,152,208,76,6094,	0,109096,186843,198546,220310,227365,230348,260519,270389,
#Partially deleted in new
chr12	32107228	32377877	chr12:32107228-32377877	3	+	32107331	32377627	789624	10	316,213,153,426,1095,152,318,194,76,338,	0,109018,186765,198468,220232,227287,230270,231557,260441,270311,
#Partially deleted in new
chr12	32107251	32377923	chr12:32107251-32377923	0	+	32107331	32338809	789624	10	293,213,153,426,1095,152,208,194,76,384,	0,108995,186742,198445,220209,227264,230247,231534,260418,270288,
#Deleted in new
chr12	32107295	32108806	chr12:32107295-32108806	1	+	32107331	32108701	789624	3	249,12,162,	0,366,1349,
#Deleted in new
chr12	32109075	32109602	chr12:32109075-32109602	3	+	32109075	32109075	8553170	1	527,	0,
#Deleted in new
chr12	32227409	32228154	chr12:32227409-32228154	7	-	32227409	32227409	16724991	1	745,	0,
#Partially deleted in new
chr12	32328401	32333065	chr12:32328401-32333065	0	+	32328401	32332507	789624	2	154,612,	0,4052,
#Partially deleted in new
chr12	32334516	32338930	chr12:32334516-32338930	0	+	32334516	32337868	789624	2	151,1432,	0,2982,
#Deleted in new
chr12	32337498	32339120	chr12:32337498-32339120	0	+	32337498	32337498	8553170	2	208,335,	0,1287,
#Deleted in new
chr12	32339367	32340724	chr12:32339367-32340724	3	+	32339367	32339367	8553170	1	1357,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	32352348	32354144	chr12:32352348-32354144	3	+	32352348	32352348	8553170	1	1796,	0,
#Partially deleted in new
chr12	32367533	32368062	chr12:32367533-32368062	0	+	32367533	32367533	8553170	1	529,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	32396049	32396147	chr12:32396049-32396147	3	-	32396049	32396049	8553170	1	98,	0,
#Partially deleted in new
chr12	32399528	32640533	chr12:32399528-32640533	1	+	32399793	32640533	789624	17	431,153,184,508,90,146,157,139,59,147,173,31,93,126,141,141,258,	0,164608,176737,182431,198968,201749,202632,208428,211247,211608,220169,224893,225447,226125,234020,239126,240747,
#Partially deleted in new
chr12	32399855	32582251	chr12:32399855-32582251	0	+	32399855	32399855	8553170	3	104,153,292,	0,164281,182104,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	32477381	32477471	chr12:32477381-32477471	3	-	32477381	32477381	8553170	1	90,	0,
#Partially deleted in new
chr12	32485971	32640739	chr12:32485971-32640739	1	+	32486133	32640533	789624	17	172,153,184,508,90,146,157,139,59,147,173,31,93,126,141,141,464,	0,78165,90294,95988,112525,115306,116189,121985,124804,125165,133726,138450,139004,139682,147577,152683,154304,
#Partially deleted in new
chr12	32502042	32582955	chr12:32502042-32582955	1	+	32576357	32582491	789624	4	296,153,184,996,	0,62094,74223,79917,
#Partially deleted in new
chr12	32502048	32582955	chr12:32502048-32582955	0	+	32502048	32502048	8553170	3	290,153,996,	0,62088,79911,
#Partially deleted in new
chr12	32502130	32576298	chr12:32502130-32576298	0	+	32502130	32502130	8553170	4	208,153,143,33,	0,62006,72595,74135,
#Partially deleted in new
chr12	32502133	32640650	chr12:32502133-32640650	0	+	32576357	32600427	789624	18	205,153,184,508,90,100,146,157,158,59,147,173,31,93,126,141,141,375,	0,62003,74132,79826,96363,98276,99144,100027,105804,108642,109003,117564,122288,122842,123520,131415,136521,138142,
#Partially deleted in new
chr12	32502156	32640748	chr12:32502156-32640748	0	+	32576357	32598527	789624	16	182,153,184,90,146,157,139,59,147,173,31,93,126,141,141,473,	0,61980,74109,96340,99121,100004,105800,108619,108980,117541,122265,122819,123497,131392,136498,138119,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr12	32502159	32646050	chr12:32502159-32646050	3	+	32576357	32640533	789624	17	179,153,184,508,90,146,157,139,59,147,173,31,93,126,141,141,5775,	0,61977,74106,79800,96337,99118,100001,105797,108616,108977,117538,122262,122816,123494,131389,136495,138116,
#Partially deleted in new
chr12	32502160	32579640	chr12:32502160-32579640	0	+	32502160	32502160	8553170	4	178,153,184,44,	0,61976,74105,77436,
#Partially deleted in new
chr12	32502169	32638929	chr12:32502169-32638929	0	+	32576357	32600427	789624	17	169,153,184,508,90,100,146,157,139,59,147,173,31,93,126,141,275,	0,61967,74096,79790,96327,98240,99108,99991,105787,108606,108967,117528,122252,122806,123484,131379,136485,
#Partially deleted in new
chr12	32502178	32576344	chr12:32502178-32576344	0	+	32502178	32502178	8553170	5	160,63,80,153,79,	0,9006,9651,61958,74087,
#Partially deleted in new
chr12	32502183	32641519	chr12:32502183-32641519	1	+	32582146	32640533	789624	16	155,153,508,90,146,157,139,59,147,173,31,93,126,141,141,1244,	0,61953,79776,96313,99094,99977,105773,108592,108953,117514,122238,122792,123470,131365,136471,138092,
#Partially deleted in new
chr12	32534323	32640737	chr12:32534323-32640737	1	+	32534407	32640533	789624	17	175,153,184,508,90,146,157,139,59,147,173,31,93,126,141,141,462,	0,29813,41942,47636,64173,66954,67837,73633,76452,76813,85374,90098,90652,91330,99225,104331,105952,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr12	32679199	32745650	chr12:32679199-32745650	1	+	32701517	32743410	0	17	266,148,39,47,132,207,121,156,90,93,57,78,33,177,110,160,2297,	0,22215,26625,28167,41464,43227,51814,52156,52654,54515,57905,58665,59064,60864,61209,63389,64154,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr12	32679199	32745552	chr12:32679199-32745552	1	+	32679363	32743410	0	19	266,148,47,72,87,163,121,132,207,121,156,90,93,57,33,177,110,160,2199,	0,22215,28167,28953,31729,34009,39443,41464,43227,51814,52156,52654,54515,57905,59064,60864,61209,63389,64154,
#Partially deleted in new
chr12	32679286	32743782	chr12:32679286-32743782	1	+	32679363	32743410	0	21	179,148,39,47,72,87,163,121,132,207,121,156,90,93,57,78,33,177,110,160,429,	0,22128,26538,28080,28866,31642,33922,39356,41377,43140,51727,52069,52567,54428,57818,58578,58977,60777,61122,63302,64067,
#Partially deleted in new
chr12	32679289	32743612	chr12:32679289-32743612	3	+	32679363	32743410	0	20	176,148,47,72,87,163,121,132,207,121,156,90,93,57,78,33,177,110,160,259,	0,22125,28077,28863,31639,33919,39353,41374,43137,51724,52066,52564,54425,57815,58575,58974,60774,61119,63299,64064,
#Partially deleted in new
chr12	32679291	32744428	chr12:32679291-32744428	1	+	32679363	32743410	789624	19	174,148,39,47,72,87,163,121,132,207,121,156,90,93,57,177,110,160,1075,	0,22123,26533,28075,28861,31637,33917,39351,41372,43135,51722,52064,52562,54423,57813,60772,61117,63297,64062,
#Partially deleted in new
chr12	32679300	32713346	chr12:32679300-32713346	0	+	32679300	32679300	8553170	7	165,148,47,72,87,93,138,	0,22114,28066,28852,31628,31879,33908,
#Partially deleted in new
chr12	32679302	32744350	chr12:32679302-32744350	1	+	32679363	32743410	0	18	163,148,47,72,87,163,121,132,207,121,156,90,93,57,177,110,160,997,	0,22112,28064,28850,31626,33906,39340,41361,43124,51711,52053,52551,54412,57802,60761,61106,63286,64051,
#Partially deleted in new
chr12	32679315	32706102	chr12:32679315-32706102	0	+	32679315	32679315	8553170	3	150,148,278,	0,22099,26509,
#Partially deleted in new
chr12	32679315	32711003	chr12:32679315-32711003	0	+	32679315	32679315	8553170	6	150,148,47,72,64,75,	0,22099,28051,28837,30228,31613,
#Partially deleted in new
chr12	32679319	32731383	chr12:32679319-32731383	0	+	32679363	32720674	789624	9	146,148,47,72,163,132,207,121,28,	0,22095,28047,28833,33889,41344,43107,51694,52036,
#Partially deleted in new
chr12	32679319	32731061	chr12:32679319-32731061	0	+	32679363	32718657	789624	9	146,148,47,72,87,121,132,207,48,	0,22095,28047,28833,31609,39323,41344,43107,51694,
#Partially deleted in new
chr12	32679319	32743656	chr12:32679319-32743656	0	+	32679363	32720681	789624	17	146,148,39,47,132,207,121,156,90,93,57,78,33,177,110,160,303,	0,22095,26505,28047,41344,43107,51694,52036,52534,54395,57785,58545,58944,60744,61089,63269,64034,
#Partially deleted in new
chr12	32679319	32743581	chr12:32679319-32743581	1	+	32679363	32743410	0	19	146,148,47,72,87,163,121,132,207,121,156,90,93,57,78,177,110,160,228,	0,22095,28047,28833,31609,33889,39323,41344,43107,51694,52036,52534,54395,57785,58545,60744,61089,63269,64034,
#Partially deleted in new
chr12	32679319	32718718	chr12:32679319-32718718	0	+	32679319	32679319	8553170	4	146,148,47,76,	0,22095,28047,39323,
#Partially deleted in new
chr12	32679319	32713330	chr12:32679319-32713330	0	+	32679363	32713330	789624	5	146,148,47,87,122,	0,22095,28047,31609,33889,
#Partially deleted in new
chr12	32679319	32713319	chr12:32679319-32713319	0	+	32679363	32713319	789624	7	146,58,39,47,72,87,111,	0,22095,26505,28047,28833,31609,33889,
#Partially deleted in new
chr12	32679319	32708224	chr12:32679319-32708224	0	+	32679363	32706733	789624	5	146,148,125,47,72,	0,22095,27370,28047,28833,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr12	32679322	32745549	chr12:32679322-32745549	1	+	32679363	32743410	0	20	143,148,39,47,72,87,163,121,132,207,121,156,90,93,57,78,177,110,160,2196,	0,22092,26502,28044,28830,31606,33886,39320,41341,43104,51691,52033,52531,54392,57782,58542,60741,61086,63266,64031,
#Partially deleted in new
chr12	32679335	32720795	chr12:32679335-32720795	0	+	32679363	32720795	789624	7	130,148,47,72,163,121,132,	0,22079,28031,28817,33873,39307,41328,
#Partially deleted in new
chr12	32679707	32713324	chr12:32679707-32713324	0	+	32679707	32679707	8553170	6	280,148,47,72,87,116,	0,21707,27659,28445,31221,33501,
#Deleted in new
chr12	32692503	32692848	chr12:32692503-32692848	7	-	32692503	32692503	16724991	1	345,	0,
#Partially deleted in new
chr12	32701414	32744087	chr12:32701414-32744087	0	+	32701414	32708169	789624	17	148,72,87,163,121,132,207,121,156,90,93,57,33,177,110,160,734,	0,6738,9514,11794,17228,19249,21012,29599,29941,30439,32300,35690,36849,38649,38994,41174,41939,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	32705402	32705506	chr12:32705402-32705506	3	-	32705402	32705402	8553170	1	104,	0,
#Partially deleted in new
chr12	32706866	32708206	chr12:32706866-32708206	0	+	32706866	32706866	8553170	2	547,54,	0,1286,
#Partially deleted in new
chr12	32713246	32722772	chr12:32713246-32722772	0	+	32713246	32713246	8553170	4	125,121,132,346,	0,5396,7417,9180,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	32725247	32725660	chr12:32725247-32725660	3	-	32725247	32725247	8553170	1	413,	0,
#Deleted in new
chr12	32726382	32727387	chr12:32726382-32727387	7	-	32726382	32726382	16724991	1	1005,	0,
#Partially deleted in new
chr12	32727489	32750107	chr12:32727489-32750107	0	-	32727489	32727489	8553170	3	30,288,171,	0,19586,22447,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	32728168	32729024	chr12:32728168-32729024	3	-	32728168	32728168	8553170	1	856,	0,
#Partially deleted in new
chr12	32731468	32738151	chr12:32731468-32738151	0	+	32731468	32731468	8553170	5	43,90,93,57,287,	0,385,2246,5636,6396,
#Partially deleted in new
chr12	32731485	32738296	chr12:32731485-32738296	0	+	32731485	32732567	789624	7	26,90,73,93,57,78,33,	0,368,1052,2229,5619,6379,6778,
#Partially deleted in new
chr12	32733452	32737306	chr12:32733452-32737306	0	+	32733452	32733452	8553170	2	355,202,	0,3652,
#Partially deleted in new
chr12	32733565	32738171	chr12:32733565-32738171	0	+	32733565	32733565	8553170	3	242,57,307,	0,3539,4299,
#Deleted in new
chr12	32736929	32737660	chr12:32736929-32737660	3	-	32736929	32736929	8553170	1	731,	0,
#Deleted in new
chr12	32737976	32740467	chr12:32737976-32740467	0	+	32737976	32737976	8553170	3	320,177,59,	0,2087,2432,
#Partially deleted in new
chr12	32739844	32742684	chr12:32739844-32742684	0	+	32739844	32739844	8553170	3	396,110,96,	0,564,2744,
#Partially deleted in new
chr12	32740153	32743583	chr12:32740153-32743583	0	+	32740153	32740153	8553170	3	365,160,230,	0,2435,3200,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	32746543	32755902	chr12:32746543-32755902	3	-	32747203	32755874	0	5	820,171,156,168,807,	0,3393,4175,7374,8552,
#Partially deleted in new
chr12	32747203	32755796	chr12:32747203-32755796	0	-	32750832	32755796	789624	5	160,171,121,168,701,	0,2733,3515,6714,7892,
#Partially deleted in new
chr12	32790744	32896840	chr12:32790744-32896840	3	-	32792423	32896731	0	13	1748,88,190,154,174,165,118,178,208,136,698,113,332,	0,1899,5364,11658,30611,31722,33300,50283,60021,78182,87101,88175,105764,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	32790853	32896756	chr12:32790853-32896756	1	-	32792423	32896731	0	14	1639,88,190,154,174,165,118,178,132,208,136,698,113,248,	0,1790,5255,11549,30502,31613,33191,50174,52328,59912,78073,86992,88066,105655,
#Deleted in new
chr12	32791942	32792875	chr12:32791942-32792875	0	-	32791942	32791942	8553170	2	550,232,	0,701,
#Partially deleted in new
chr12	32802449	32821814	chr12:32802449-32821814	0	-	32802449	32802449	8553170	2	107,459,	0,18906,
#Deleted in new
chr12	32820141	32820567	chr12:32820141-32820567	3	-	32820141	32820141	8553170	1	426,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	32820888	32824139	chr12:32820888-32824139	0	-	32820888	32820888	8553170	3	641,165,95,	0,1578,3156,
#Partially deleted in new
chr12	32821466	32824405	chr12:32821466-32824405	0	-	32821466	32821466	8553170	3	63,165,361,	0,1000,2578,
#Deleted in new
chr12	32863117	32863433	chr12:32863117-32863433	7	+	32863117	32863117	16724991	1	316,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	32893308	32896601	chr12:32893308-32896601	0	-	32894761	32896601	789624	2	1470,93,	0,3200,
#Deleted in new
chr12	32985837	32987070	chr12:32985837-32987070	7	+	32985837	32985837	16724991	1	1233,	0,
#Partially deleted in new
chr12	32988762	32993754	chr12:32988762-32993754	3	+	32988762	32988762	8553170	2	129,191,	0,4801,
#Partially deleted in new
chr12	33374237	33439819	chr12:33374237-33439819	3	-	33376829	33439522	789624	7	2664,130,172,121,568,358,448,	0,5594,8111,10933,32551,51900,65134,
#Partially deleted in new
chr12	33376272	33439646	chr12:33376272-33439646	0	-	33423933	33439522	789624	9	629,130,172,121,568,80,100,358,275,	0,3559,6076,8898,30516,31966,47637,49865,63099,
#Deleted in new
chr12	33404871	33405896	chr12:33404871-33405896	3	-	33404871	33404871	8553170	1	1025,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	33407797	33426160	chr12:33407797-33426160	0	-	33407797	33407797	8553170	2	521,23,	0,18340,
#Deleted in new
chr12	33432310	33432853	chr12:33432310-33432853	3	-	33432310	33432310	8553170	1	543,	0,
#Deleted in new
chr12	33454344	33455452	chr12:33454344-33455452	7	+	33454344	33454344	16724991	1	1108,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	33576094	33576200	chr12:33576094-33576200	3	+	33576094	33576094	8553170	1	106,	0,
#Deleted in new
chr12	33717852	33718217	chr12:33717852-33718217	7	+	33717852	33717852	16724991	1	365,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	33923373	33923480	chr12:33923373-33923480	3	-	33923373	33923373	8553170	1	107,	0,
#Partially deleted in new
chr12	33982464	33982566	chr12:33982464-33982566	3	-	33982464	33982464	8553170	1	102,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	34022280	34028302	chr12:34022280-34028302	3	+	34022599	34026915	789624	3	490,198,2440,	0,1681,3582,
#Partially deleted in new
chr12	34022280	34046417	chr12:34022280-34046417	3	-	34022280	34022280	8553170	2	1854,325,	0,23812,
#Partially deleted in new
chr12	34022467	34029694	chr12:34022467-34029694	1	+	34022599	34029636	789624	3	303,198,70,	0,1494,7157,
#Deleted in new
chr12	34022472	34026152	chr12:34022472-34026152	0	+	34022472	34022472	8553170	2	1687,290,	0,3390,
#Deleted in new
chr12	34022472	34027029	chr12:34022472-34027029	0	+	34022599	34024050	789624	3	272,198,1167,	0,1489,3390,
#Partially deleted in new
chr12	34037437	34056740	chr12:34037437-34056740	3	+	34037437	34037437	8553170	3	211,403,180,	0,18619,19123,
#Deleted in new
chr12	34162476	34163442	chr12:34162476-34163442	7	+	34162476	34162476	16724991	4	187,244,123,154,	0,250,602,812,
#Deleted in new
chr12	34164772	34166954	chr12:34164772-34166954	7	-	34164772	34164772	16724991	4	1047,111,109,57,	0,1540,1730,2125,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	34191278	34218853	chr12:34191278-34218853	3	-	34191278	34191278	8553170	4	154,126,148,73,	0,11178,20595,27502,
#Deleted in new
chr12	34208414	34209675	chr12:34208414-34209675	7	-	34208414	34208414	16724991	1	1261,	0,
#Deleted in new
chr12	34249480	34249958	chr12:34249480-34249958	7	+	34249480	34249480	16724991	1	478,	0,
#Partially deleted in new
chr12	37575586	37576384	chr12:37575586-37576384	7	+	37575586	37575586	16724991	2	127,96,	0,702,
#Deleted in new
chr12	38078528	38078999	chr12:38078528-38078999	7	-	38078528	38078528	16724991	1	471,	0,
#Partially deleted in new
chr12	38082045	38087392	chr12:38082045-38087392	7	+	38082045	38082045	16724991	10	184,128,112,155,130,147,94,101,139,295,	0,1135,1464,1653,1911,2658,3037,3814,4043,5052,
#Deleted in new
chr12	38150049	38150138	chr12:38150049-38150138	3	+	38150049	38150049	8553170	1	89,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	38161465	38161582	chr12:38161465-38161582	7	-	38161465	38161465	16724991	1	117,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	38163402	38163515	chr12:38163402-38163515	7	-	38163402	38163402	16724991	1	113,	0,
#Deleted in new
chr12	38201565	38203792	chr12:38201565-38203792	7	+	38201565	38201565	16724991	4	58,109,111,1073,	0,362,550,1154,
#Deleted in new
chr12	38205097	38206009	chr12:38205097-38206009	7	-	38205097	38205097	16724991	4	144,95,238,143,	0,233,482,769,
#Deleted in new
chr12	38206230	38207192	chr12:38206230-38207192	7	-	38206230	38206230	16724991	2	144,439,	0,523,
#Partially deleted in new
chr12	38274447	38274549	chr12:38274447-38274549	3	-	38274447	38274447	8553170	1	102,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	38316577	38329728	chr12:38316577-38329728	3	+	38316893	38321213	789624	3	487,198,9568,	0,1683,3583,
#Partially deleted in new
chr12	38316761	38323982	chr12:38316761-38323982	1	+	38316893	38323924	789624	3	303,198,70,	0,1499,7151,
#Deleted in new
chr12	38316766	38320450	chr12:38316766-38320450	0	+	38316766	38316766	8553170	2	1692,290,	0,3394,
#Deleted in new
chr12	38316838	38321327	chr12:38316838-38321327	0	+	38316893	38318349	789624	3	200,198,1167,	0,1422,3322,
#Deleted in new
chr12	38532894	38533050	chr12:38532894-38533050	7	-	38532894	38532894	16724991	1	156,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	38544176	38589812	chr12:38544176-38589812	3	-	38544176	38544176	8553170	4	355,124,101,98,	0,2208,45153,45538,
#Deleted in new
chr12	38544327	38546477	chr12:38544327-38546477	0	-	38544327	38544327	8553170	2	249,93,	0,2057,
#Partially deleted in new
chr12	38646821	38679622	chr12:38646821-38679622	0	-	38646821	38646821	8553170	5	272,74,58,103,45,	0,23907,28895,30630,32756,
#Partially deleted in new
chr12	38652184	38905631	chr12:38652184-38905631	3	-	38653881	38905534	789624	20	1886,74,58,103,128,182,47,62,54,76,42,105,104,64,77,40,104,47,41,195,	0,18544,23532,25267,33305,41472,50690,71587,72661,78098,108662,109927,115450,124053,177194,187731,196374,220819,222286,253252,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	38652357	38721222	chr12:38652357-38721222	1	-	38653881	38693806	789624	8	1713,74,58,103,128,182,47,570,	0,18371,23359,25094,33132,41299,50517,68295,
#Partially deleted in new
chr12	38653370	38679678	chr12:38653370-38679678	0	-	38653370	38653370	8553170	5	700,74,58,103,101,	0,17358,22346,24081,26207,
#Partially deleted in new
chr12	38653833	38907430	chr12:38653833-38907430	1	-	38653881	38907380	789624	20	237,74,58,103,128,182,47,62,54,76,42,105,104,64,77,40,104,47,41,112,	0,16895,21883,23618,31656,39823,49041,69938,71012,76449,107013,108278,113801,122404,175545,186082,194725,219170,220637,253485,
#Partially deleted in new
chr12	38653961	38670995	chr12:38653961-38670995	0	-	38653961	38653961	8553170	2	109,267,	0,16767,
#Partially deleted in new
chr12	38670756	38685694	chr12:38670756-38685694	0	-	38670756	38670756	8553170	4	46,58,103,205,	0,4960,6695,14733,
#Partially deleted in new
chr12	38726358	38767717	chr12:38726358-38767717	0	-	38726358	38726358	8553170	5	236,76,42,105,83,	0,3924,34488,35753,41276,
#Partially deleted in new
chr12	38767690	38906269	chr12:38767690-38906269	0	-	38767690	38767726	789624	8	48,64,77,40,104,47,41,128,	0,8547,61688,72225,80868,105313,106780,138451,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	38906450	38909592	chr12:38906450-38909592	3	+	38906450	38906450	8553170	2	243,283,	0,2859,
#Partially deleted in new
chr12	38994802	38996882	chr12:38994802-38996882	7	-	38994802	38994802	16724991	2	134,171,	0,1909,
#Partially deleted in new
chr12	39058027	39059933	chr12:39058027-39059933	7	-	39058027	39058027	16724991	3	78,82,156,	0,1290,1750,
#Deleted in new
chr12	39170645	39170880	chr12:39170645-39170880	7	+	39170645	39170645	16724991	1	235,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	39293227	39312826	chr12:39293227-39312826	0	-	39293227	39293227	8553170	7	1290,200,171,118,165,181,1410,	0,8252,9737,11593,14337,16358,18189,
#Partially deleted in new
chr12	39293228	39443390	chr12:39293228-39443390	3	-	39294423	39442970	0	37	1289,200,171,118,165,181,137,12,39,129,108,215,55,61,21,166,102,195,154,215,69,108,200,189,118,91,204,64,190,196,116,168,135,150,183,223,464,	0,8251,9736,11592,14336,16357,18188,22000,22703,24844,26677,29439,32610,33035,37013,37517,38461,38985,39362,39664,39983,43867,46936,47677,48276,48805,58548,63603,64019,64949,69869,73121,73801,74654,76500,76810,149698,
#Partially deleted in new
chr12	39293228	39442943	chr12:39293228-39442943	0	-	39294423	39442943	789624	37	1289,200,171,118,165,181,137,15,39,129,108,215,55,61,21,166,102,195,154,215,69,108,200,189,118,91,204,64,190,196,116,168,135,150,183,223,17,	0,8251,9736,11592,14336,16357,18188,22000,22703,24844,26677,29439,32610,33035,37013,37517,38461,38985,39362,39664,39983,43867,46936,47677,48276,48805,58548,63603,64019,64949,69869,73121,73801,74654,76500,76810,149698,
#Partially deleted in new
chr12	39293230	39332408	chr12:39293230-39332408	0	-	39294423	39332408	789624	14	1287,200,171,118,165,181,137,108,215,55,61,166,102,195,	0,8249,9734,11590,14334,16355,18186,26675,29437,32608,33033,37515,38459,38983,
#Partially deleted in new
chr12	39293230	39341058	chr12:39293230-39341058	0	-	39294423	39341058	789624	22	1287,200,171,118,165,181,137,39,108,215,55,61,21,166,102,195,154,215,69,108,200,153,	0,8249,9734,11590,14334,16355,18186,22701,26675,29437,32608,33033,37011,37515,38459,38983,39360,39662,39981,43865,46934,47675,
#Partially deleted in new
chr12	39294386	39443059	chr12:39294386-39443059	1	-	39294423	39442970	0	34	131,200,171,118,165,181,137,129,108,215,55,61,166,102,195,154,215,69,108,200,189,118,91,204,64,190,196,116,168,135,150,183,223,133,	0,7093,8578,10434,13178,15199,17030,23686,25519,28281,31452,31877,36359,37303,37827,38204,38506,38825,42709,45778,46519,47118,47647,57390,62445,62861,63791,68711,71963,72643,73496,75342,75652,148540,
#Partially deleted in new
chr12	39294420	39442986	chr12:39294420-39442986	1	-	39294423	39442970	0	38	97,200,171,118,165,181,137,12,39,129,108,215,55,61,21,166,102,195,154,215,69,108,200,189,118,91,39,204,64,190,196,116,168,135,150,183,223,60,	0,7059,8544,10400,13144,15165,16996,20808,21511,23652,25485,28247,31418,31843,35821,36325,37269,37793,38170,38472,38791,42675,45744,46485,47084,47613,52045,57356,62411,62827,63757,68677,71929,72609,73462,75308,75618,148506,
#Partially deleted in new
chr12	39294423	39442970	chr12:39294423-39442970	1	-	39294423	39442970	0	34	94,200,171,118,165,181,137,129,108,215,55,61,21,166,102,195,154,215,108,200,189,118,91,204,64,190,196,116,168,135,150,183,223,44,	0,7056,8541,10397,13141,15162,16993,23649,25482,28244,31415,31840,35818,36322,37266,37790,38167,38469,42672,45741,46482,47081,47610,57353,62408,62824,63754,68674,71926,72606,73459,75305,75615,148503,
#Partially deleted in new
chr12	39309751	39340247	chr12:39309751-39340247	0	-	39322663	39340247	789624	14	15,139,108,1535,55,61,166,102,195,154,215,69,108,83,	0,1663,10154,11596,16087,16512,20994,21938,22462,22839,23141,23460,27344,30413,
#Partially deleted in new
chr12	39319989	39332024	chr12:39319989-39332024	0	-	39319989	39319989	8553170	6	24,55,61,166,102,94,	0,5849,6274,10756,11700,11941,
#Deleted in new
chr12	39330051	39332327	chr12:39330051-39332327	0	-	39330227	39332327	789624	4	211,166,102,114,	0,694,1638,2162,
#Partially deleted in new
chr12	39333036	39337541	chr12:39333036-39337541	0	-	39333036	39333036	8553170	3	71,69,446,	0,175,4059,
#Deleted in new
chr12	39356599	39357287	chr12:39356599-39357287	0	-	39356599	39356599	8553170	2	296,40,	0,648,
#Partially deleted in new
chr12	39357250	39367927	chr12:39357250-39367927	0	-	39357250	39367927	789624	6	187,196,116,168,159,45,	0,927,5847,9099,9779,10632,
#Partially deleted in new
chr12	39466441	39467345	chr12:39466441-39467345	7	-	39466441	39466441	16724991	2	110,692,	0,212,
#Deleted in new
chr12	39539580	39539851	chr12:39539580-39539851	7	-	39539580	39539580	16724991	1	271,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	39550032	39619751	chr12:39550032-39619751	3	-	39553911	39619615	789624	10	4099,126,85,146,146,95,169,116,181,1075,	0,23683,29502,36119,50538,53879,54729,57566,66955,68644,
#Partially deleted in new
chr12	39611818	39614648	chr12:39611818-39614648	3	+	39611818	39611818	8553170	2	1280,1223,	0,1607,
#Partially deleted in new
chr12	39626166	39692187	chr12:39626166-39692187	1	+	39626336	39692135	789624	11	193,40,139,133,49,186,116,530,70,61,139,	0,14788,17612,20162,20673,21625,24072,56444,57248,58700,65882,
#Partially deleted in new
chr12	39626182	39721914	chr12:39626182-39721914	3	+	39626336	39721251	789624	13	177,40,139,133,49,186,116,530,70,61,64,83,1128,	0,14772,17596,20146,20657,21609,24056,56428,57232,58684,65866,90573,94604,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr12	39626217	39908300	chr12:39626217-39908300	0	+	39646357	39684250	789624	19	142,40,133,49,186,116,530,70,192,61,64,83,190,187,77,70,81,123,667,	0,14737,20111,20622,21574,24021,56393,57197,57903,58649,65831,90538,110492,119642,128038,138522,162370,176042,281416,
#Partially deleted in new
chr12	39755020	40105859	chr12:39755020-40105859	3	-	39760025	40105808	789624	10	5232,153,122,126,121,164,109,209,160,607,	0,9439,9716,75082,109741,116777,196236,273280,293030,350232,
#Partially deleted in new
chr12	39819749	39819883	chr12:39819749-39819883	3	-	39819749	39819749	8553170	1	134,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	39829407	39871881	chr12:39829407-39871881	0	-	39829407	39829407	8553170	3	821,121,84,	0,35354,42390,
#Partially deleted in new
chr12	39830124	39835760	chr12:39830124-39835760	0	-	39830124	39830124	8553170	2	356,80,	0,5556,
#Partially deleted in new
chr12	39949489	40106089	chr12:39949489-40106089	1	-	39951216	40105808	789624	4	1876,209,160,837,	0,78811,98561,155763,
#Deleted in new
chr12	40068242	40068590	chr12:40068242-40068590	7	-	40068242	40068242	16724991	1	348,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	40140925	40142876	chr12:40140925-40142876	3	-	40140925	40140925	8553170	1	1951,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	40156112	40211419	chr12:40156112-40211419	3	+	40156112	40156112	8553170	7	231,183,105,393,128,83,3629,	0,42093,42444,47339,51016,51428,51678,
#Partially deleted in new
chr12	40156238	40167612	chr12:40156238-40167612	0	+	40156238	40156238	8553170	2	105,365,	0,11009,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	40166251	40167847	chr12:40166251-40167847	0	+	40166251	40166251	8553170	2	99,600,	0,996,
#Partially deleted in new
chr12	40196743	40283952	chr12:40196743-40283952	0	+	40225616	40283952	789624	15	30,86,110,89,135,132,120,52,125,113,145,140,129,171,78,	0,28811,35530,38882,41225,46806,53082,56221,62736,67045,77839,78110,81144,81347,87131,
#Deleted in new
chr12	40223075	40224915	chr12:40223075-40224915	1	-	40223075	40223075	8553170	1	1840,	0,
#Partially deleted in new
chr12	40225010	40304976	chr12:40225010-40304976	1	+	40225131	40304173	789624	27	272,86,110,89,135,135,132,120,143,80,107,130,125,113,145,140,129,171,259,189,119,70,218,251,149,94,1029,	0,544,7263,10615,12958,15472,18539,24815,26221,26454,27899,32237,34469,38778,49572,49843,52877,53080,58864,62340,68534,69834,70416,73232,74098,77778,78937,
#Partially deleted in new
chr12	40225073	40369281	chr12:40225073-40369281	3	+	40225131	40367765	0	51	209,86,110,89,135,135,132,120,143,80,107,130,125,113,145,140,129,171,259,189,119,70,218,251,149,94,187,182,230,128,219,202,89,188,155,147,192,147,101,191,161,171,101,195,194,73,185,153,209,72,1638,	0,481,7200,10552,12895,15409,18476,24752,26158,26391,27836,32174,34406,38715,49509,49780,52814,53017,58801,62277,68471,69771,70353,73169,74035,77715,78874,80711,83393,84032,85357,88898,90138,94914,95960,96961,97245,98086,103286,109893,115220,121679,123335,126465,129225,131041,134186,138328,139768,141932,142570,
#Partially deleted in new
chr12	40225594	40232783	chr12:40225594-40232783	0	+	40225594	40225594	8553170	2	46,510,	0,6679,
#Deleted in new
chr12	40286288	40286662	chr12:40286288-40286662	7	+	40286288	40286288	16724991	1	374,	0,
#Partially deleted in new
chr12	40295504	40369285	chr12:40295504-40369285	0	+	40295504	40300895	789624	30	140,251,149,252,94,187,182,230,128,219,202,89,188,155,147,192,147,101,191,161,171,101,195,194,73,185,153,209,72,1642,	0,2738,3604,5308,7284,8443,10280,12962,13601,14926,18467,19707,24483,25529,26530,26814,27655,32855,39462,44789,51248,52904,56034,58794,60610,63755,67897,69337,71501,72139,
#Partially deleted in new
chr12	40298465	40369285	chr12:40298465-40369285	0	+	40298465	40298465	8553170	26	28,149,94,187,182,230,128,219,202,89,188,155,147,192,147,101,191,161,171,101,195,194,73,185,153,4444,	0,643,4323,5482,7319,10001,10640,11965,15506,16746,21522,22568,23569,23853,24694,29894,36501,41828,48287,49943,53073,55833,57649,60794,64936,66376,
#Partially deleted in new
chr12	40312713	40320062	chr12:40312713-40320062	0	+	40312713	40312713	8553170	4	195,202,89,75,	0,1258,2498,7274,
#Partially deleted in new
chr12	40346846	40368879	chr12:40346846-40368879	0	+	40346846	40367765	789624	10	77,101,195,194,73,185,153,209,54,1236,	0,1562,4692,7452,9268,12413,16555,17995,20159,20797,
#Partially deleted in new
chr12	40393394	40570760	chr12:40393394-40570760	0	+	40393394	40393394	8553170	173	105,33,27,150,150,150,186,165,183,183,42,51,60,229,111,61,98,211,123,124,136,93,85,138,150,95,127,247,53,101,152,139,105,195,240,157,126,142,32,30,42,33,45,39,99,66,84,78,75,135,66,99,102,102,96,12253,66,54,54,54,45,54,54,54,54,54,54,54,54,54,54,54,54,54,58,52,54,54,54,54,54,54,54,54,54,54,45,54,45,54,54,54,33,54,54,54,30,54,54,54,54,54,54,36,48,54,54,54,54,33,54,51,54,48,54,54,54,54,54,54,51,54,33,54,54,45,54,45,54,33,54,54,54,33,54,54,33,54,54,54,33,54,54,48,63,48,54,54,48,54,54,48,54,54,54,54,51,54,54,42,54,54,51,54,48,30,32,163,38,115,36,109,298,	0,4484,6646,12629,14831,18638,21073,21400,21651,22653,22923,24735,25779,26812,27818,28445,28709,33012,33979,34575,36147,38231,38983,39232,40369,42702,43222,44733,47179,47329,47666,48477,49681,49871,50682,50994,52124,53093,53930,54771,56294,56866,57277,65336,66840,70045,70725,71026,71744,72060,72578,79746,81365,81701,82175,85658,100552,100724,104849,105558,106009,106302,106780,107758,107963,108648,110083,110271,110997,111719,112684,112869,113608,113818,114446,114622,115639,116564,116774,117402,117576,118773,120134,120336,120995,121580,121779,122047,122706,123019,123219,124458,125116,125411,125608,126524,127032,127329,127520,129248,129997,130194,131121,131677,131988,132173,132878,133701,133896,134360,134662,134862,135782,136878,137063,137662,137814,138634,138834,139630,139838,140761,141316,141618,141809,142370,142511,143045,143528,144001,144267,144459,145399,146134,148224,148420,148879,149167,149370,150394,150957,151244,151435,151655,151941,152561,153001,153208,153740,154377,155183,156202,156501,156710,157087,157286,163750,164069,164423,164698,165840,167141,167609,167944,168167,170136,172118,172238,172731,174203,175612,176301,177068,
#Partially deleted in new
chr12	40426159	40428071	chr12:40426159-40428071	0	+	40426159	40426159	8553170	3	458,123,102,	0,1214,1810,
#Deleted in new
chr12	40520578	40523642	chr12:40520578-40523642	0	+	40520578	40520578	8553170	7	199,54,54,55,54,54,54,	0,336,895,1046,2064,2813,3010,
#Deleted in new
chr12	40522484	40534803	chr12:40522484-40534803	0	+	40522484	40522484	8553170	15	961,54,1106,54,692,54,51,54,48,54,1226,54,51,54,93,	0,1104,2031,3788,4611,5572,5772,6692,7788,7973,8572,10540,10748,11671,12226,
#Partially deleted in new
chr12	40528056	40541623	chr12:40528056-40541623	3	+	40528056	40541623	789624	22	54,54,54,54,54,54,54,51,54,33,54,54,45,54,45,54,33,54,54,54,33,5,	0,2401,3000,3152,3972,4172,4968,5176,6099,6654,6956,7147,7708,7849,8383,8866,9339,9605,9797,10737,11472,13562,
#Deleted in new
chr12	40532983	40537402	chr12:40532983-40537402	0	+	40532983	40532983	8553170	11	95,51,54,33,54,54,45,54,45,54,7,	0,249,1172,1727,2029,2220,2781,2922,3456,3939,4412,
#Partially deleted in new
chr12	40544547	40548626	chr12:40544547-40548626	0	+	40544547	40544547	8553170	9	145,48,63,48,54,54,48,54,49,	0,502,788,1408,1848,2055,2587,3224,4030,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	40544930	40548004	chr12:40544930-40548004	0	+	40544930	40544930	8553170	9	167,63,48,54,54,48,146,54,10,	0,405,1025,1465,1672,2204,2546,2841,3064,
#Partially deleted in new
chr12	40557842	40563668	chr12:40557842-40563668	0	+	40557842	40557842	8553170	8	29,42,54,54,51,54,48,138,	0,250,1392,2693,3161,3496,3719,5688,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	40567725	40570753	chr12:40567725-40570753	0	+	40567725	40567725	8553170	4	108,40,109,291,	0,1277,1970,2737,
#Deleted in new
chr12	40569624	40570832	chr12:40569624-40570832	0	+	40569624	40569624	8553170	2	180,370,	0,838,
#Partially deleted in new
chr12	40692441	40972435	chr12:40692441-40972435	1	+	40908432	40971513	0	16	151,137,33,133,173,96,207,100,182,125,118,151,128,176,121,1002,	0,215915,217631,226197,229814,232115,237354,241019,241255,244339,245128,246893,251155,251553,266672,278992,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	40692461	40918732	chr12:40692461-40918732	0	+	40908432	40918732	789624	5	131,160,137,33,94,	0,203488,215895,217611,226177,
#Partially deleted in new
chr12	40692551	41072418	chr12:40692551-41072418	3	+	40908432	41070035	0	24	41,137,33,133,173,96,207,100,182,125,118,151,128,176,121,159,150,71,235,104,187,113,157,2460,	0,215805,217521,226087,229704,232005,237244,240909,241145,244229,245018,246783,251045,251443,266562,288357,300568,321676,324130,327785,332598,335305,336511,377407,
#Deleted in new
chr12	40728810	40729897	chr12:40728810-40729897	7	+	40728810	40728810	16724991	1	1087,	0,
#Partially deleted in new
chr12	40742352	40922298	chr12:40742352-40922298	0	+	40908432	40922298	789624	5	117,137,33,133,43,	0,166004,167720,176286,179903,
#Partially deleted in new
chr12	40828058	40972435	chr12:40828058-40972435	1	+	40908432	40971513	0	16	243,137,33,133,173,96,207,100,182,125,118,151,128,176,121,1002,	0,80298,82014,90580,94197,96498,101737,105402,105638,108722,109511,111276,115538,115936,131055,143375,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	40828183	40918762	chr12:40828183-40918762	0	+	40908432	40918762	789624	5	118,160,137,33,124,	0,67766,80173,81889,90455,
#Partially deleted in new
chr12	40908353	41072406	chr12:40908353-41072406	1	+	40908432	41070035	0	23	140,33,133,173,96,207,100,182,125,118,151,128,176,121,159,150,71,235,104,187,113,157,2448,	0,1719,10285,13902,16203,21442,25107,25343,28427,29216,30981,35243,35641,50760,72555,84766,105874,108328,111983,116796,119503,120709,161605,
#Partially deleted in new
chr12	40908358	41070265	chr12:40908358-41070265	1	+	40908432	41070035	0	22	135,133,173,96,207,100,182,125,118,151,128,176,121,159,150,71,235,104,187,113,157,307,	0,10280,13897,16198,21437,25102,25338,28422,29211,30976,35238,35636,50755,72550,84761,105869,108323,111978,116791,119498,120704,161600,
#Deleted in new
chr12	40978743	40979244	chr12:40978743-40979244	3	+	40978743	40978743	8553170	1	501,	0,
#Partially deleted in new
chr12	41029113	41070241	chr12:41029113-41070241	0	+	41029113	41061829	789624	3	106,123,283,	0,32648,40845,
#Partially deleted in new
chr12	41188447	41574118	chr12:41188447-41574118	3	+	41188455	41573890	789624	10	656,87,108,257,103,99,63,102,117,1755,	0,3010,5633,318008,321363,364208,367250,375100,379335,383916,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	41409466	41473510	chr12:41409466-41473510	3	-	41409466	41409466	8553170	5	496,71,136,74,146,	0,2747,2934,3546,63898,
#Deleted in new
chr12	41411524	41412477	chr12:41411524-41412477	1	-	41411524	41411524	8553170	3	351,71,77,	0,689,876,
#Partially deleted in new
chr12	41437679	41574724	chr12:41437679-41574724	1	+	41506578	41573890	8553170	9	334,120,257,103,99,63,102,117,2361,	0,22271,68776,72131,114976,118018,125868,130103,134684,
#Partially deleted in new
chr12	41437682	41574332	chr12:41437682-41574332	1	+	41437944	41573890	789624	8	331,257,103,99,63,102,117,1969,	0,68773,72128,114973,118015,125865,130100,134681,
#Partially deleted in new
chr12	41437738	41574582	chr12:41437738-41574582	1	+	41460063	41573890	789624	10	275,120,56,257,103,99,63,102,117,2219,	0,22212,40126,68717,72072,114917,117959,125809,130044,134625,
#Partially deleted in new
chr12	41509550	41574590	chr12:41509550-41574590	0	+	41509550	41509550	8553170	6	363,99,63,102,117,2227,	0,43105,46147,53997,58232,62813,
#Deleted in new
chr12	41658675	41658793	chr12:41658675-41658793	7	+	41658675	41658675	16724991	1	118,	0,
#Deleted in new
chr12	41698494	41699182	chr12:41698494-41699182	7	-	41698494	41698494	16724991	1	688,	0,
#Deleted in new
chr12	41699390	41700251	chr12:41699390-41700251	7	-	41699390	41699390	16724991	1	861,	0,
#Deleted in new
chr12	41764188	41765581	chr12:41764188-41765581	0	+	41764188	41764188	789624	2	77,262,	0,1131,
#Deleted in new
chr12	41764222	41765558	chr12:41764222-41765558	3	+	41764222	41764222	789624	3	43,69,239,	0,515,1097,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	41829897	41932592	chr12:41829897-41932592	3	-	41829897	41829897	8553170	2	28,471,	0,102224,
#Deleted in new
chr12	41911255	41912212	chr12:41911255-41912212	7	+	41911255	41911255	16724991	2	228,237,	0,720,
#Deleted in new
chr12	42069934	42070625	chr12:42069934-42070625	7	-	42069934	42069934	16724991	1	691,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	42081844	42144879	chr12:42081844-42144879	3	-	42087785	42144646	789624	8	6103,173,124,252,126,172,93,454,	0,15597,16065,23973,27721,37155,47914,62581,
#Partially deleted in new
chr12	42087144	42144712	chr12:42087144-42144712	1	-	42087785	42144646	789624	7	803,173,124,252,126,172,287,	0,10297,10765,18673,22421,31855,57281,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	42157103	42238236	chr12:42157103-42238236	1	-	42160588	42238180	0	5	3723,153,72,126,82,	0,4509,53444,80495,81051,
#Partially deleted in new
chr12	42159123	42238248	chr12:42159123-42238248	3	-	42160588	42238180	0	4	1703,153,126,94,	0,2489,78475,79031,
#Partially deleted in new
chr12	42159901	42238287	chr12:42159901-42238287	1	-	42160588	42238180	0	3	925,153,133,	0,1711,78253,
#Partially deleted in new
chr12	42160041	42161628	chr12:42160041-42161628	0	-	42160041	42160041	8553170	1	1587,	0,
#Partially deleted in new
chr12	42160265	42238248	chr12:42160265-42238248	0	-	42199168	42238180	789624	5	561,153,100,126,94,	0,1347,38870,77333,77889,
#Partially deleted in new
chr12	42160495	42237512	chr12:42160495-42237512	0	-	42160495	42160495	8553170	3	331,153,97,	0,1117,76920,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	42160607	42238221	chr12:42160607-42238221	0	-	42199168	42238180	789624	7	219,153,70,100,72,126,67,	0,1005,11532,38528,49940,76991,77547,
#Partially deleted in new
chr12	42161612	42238263	chr12:42161612-42238263	0	-	42235736	42238180	789624	6	153,100,72,142,126,109,	0,48742,48935,74001,75986,76542,
#Partially deleted in new
chr12	42161627	42210836	chr12:42161627-42210836	0	-	42161627	42161627	8553170	3	138,100,289,	0,48727,48920,
#Partially deleted in new
chr12	42161652	42238303	chr12:42161652-42238303	0	-	42210417	42238180	789624	4	113,100,72,149,	0,48702,48895,76502,
#Partially deleted in new
chr12	42161670	42238180	chr12:42161670-42238180	0	-	42210628	42238180	789624	6	95,100,100,133,126,26,	0,37465,48684,48877,75928,76484,
#Partially deleted in new
chr12	42161670	42199544	chr12:42161670-42199544	0	-	42161670	42161670	8553170	2	95,409,	0,37465,
#Partially deleted in new
chr12	42161671	42237800	chr12:42161671-42237800	0	-	42161671	42161671	8553170	3	94,100,202,	0,37464,75927,
#Partially deleted in new
chr12	42161689	42238223	chr12:42161689-42238223	0	-	42210417	42238180	789624	6	76,100,133,41,126,69,	0,48665,48858,50754,75909,76465,
#Partially deleted in new
chr12	42161698	42237800	chr12:42161698-42237800	0	-	42161698	42237633	789624	2	67,202,	0,75900,
#Partially deleted in new
chr12	42161748	42238349	chr12:42161748-42238349	0	-	42210628	42238180	789624	5	17,100,133,126,195,	0,48606,48799,75850,76406,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	42231223	42238248	chr12:42231223-42238248	0	-	42231223	42231223	8553170	3	4774,126,94,	0,6375,6931,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	42231223	42238349	chr12:42231223-42238349	1	-	42235795	42238180	0	3	4774,126,195,	0,6375,6931,
#Deleted in new
chr12	42235641	42237783	chr12:42235641-42237783	0	-	42235641	42235641	8553170	2	356,185,	0,1957,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	42238446	42441947	chr12:42238446-42441947	1	+	42238627	42441509	789624	10	215,92,165,62,212,57,80,120,141,633,	0,97436,113438,116714,136416,146493,149009,155123,160407,202868,
#Deleted in new
chr12	42286910	42288560	chr12:42286910-42288560	7	+	42286910	42286910	16724991	1	1650,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	42312077	42326105	chr12:42312077-42326105	3	-	42313066	42324102	0	8	1121,76,113,108,112,29,86,182,	0,1612,1796,5262,5709,10340,11941,13846,
#Partially deleted in new
chr12	42312930	42326087	chr12:42312930-42326087	1	-	42313066	42317888	789624	8	268,76,113,108,112,29,37,164,	0,759,943,4409,4856,9487,11137,12993,
#Partially deleted in new
chr12	42313689	42326118	chr12:42313689-42326118	0	-	42313689	42317888	789624	6	76,113,108,112,29,195,	0,184,3650,4097,8728,12234,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	42323699	42323859	chr12:42323699-42323859	3	-	42323699	42323699	5263520	1	160,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	42323879	42326094	chr12:42323879-42326094	0	-	42323879	42323879	8553170	2	225,171,	0,2044,
#Partially deleted in new
chr12	42325352	42325997	chr12:42325352-42325997	0	-	42325352	42325352	8553170	2	467,74,	0,571,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	42326144	42441950	chr12:42326144-42441950	1	+	42332701	42441509	789624	11	85,43,92,165,62,212,57,80,120,141,636,	0,6515,9738,25740,29016,48718,58795,61311,67425,72709,115170,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	42326148	42442181	chr12:42326148-42442181	1	+	42335902	42441509	789624	10	81,43,92,165,62,212,80,120,141,867,	0,6511,9734,25736,29012,48714,61307,67421,72705,115166,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	42326156	42441955	chr12:42326156-42441955	3	+	42335902	42441509	789624	10	73,92,165,62,212,57,80,120,141,641,	0,9726,25728,29004,48706,58783,61299,67413,72697,115158,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	42326157	42355678	chr12:42326157-42355678	0	+	42326157	42326157	8553170	4	72,92,165,518,	0,9725,25727,29003,
#Partially deleted in new
chr12	42326162	42393640	chr12:42326162-42393640	0	+	42332701	42387459	789624	6	67,43,92,62,80,71,	0,6497,9720,28998,61293,67407,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	42326167	42441963	chr12:42326167-42441963	1	+	42335902	42441509	789624	9	62,92,165,62,212,80,120,141,649,	0,9715,25717,28993,48695,61288,67402,72686,115147,
#Partially deleted in new
chr12	42326170	42441543	chr12:42326170-42441543	1	+	42332701	42441509	789624	10	59,43,92,62,212,57,80,120,141,229,	0,6489,9712,28990,48692,58769,61285,67399,72683,115144,
#Partially deleted in new
chr12	42326171	42375298	chr12:42326171-42375298	0	+	42326171	42326171	8553170	4	58,92,62,436,	0,9711,28989,48691,
#Partially deleted in new
chr12	42326173	42459715	chr12:42326173-42459715	1	+	42332701	42459366	789624	10	56,43,92,62,212,80,120,141,115,438,	0,6486,9709,28987,48689,61282,67396,72680,115141,133104,
#Partially deleted in new
chr12	42326177	42399425	chr12:42326177-42399425	0	+	42326177	42326177	8553170	9	52,43,92,62,212,57,80,120,572,	0,6482,9705,28983,48685,58762,61278,67392,72676,
#Partially deleted in new
chr12	42326180	42359658	chr12:42326180-42359658	0	+	42326180	42326180	8553170	5	49,92,165,62,402,	0,9702,25704,28980,33076,
#Partially deleted in new
chr12	42331786	42375026	chr12:42331786-42375026	0	+	42332701	42375026	789624	6	62,43,92,165,62,164,	0,873,4096,20098,23374,43076,
#Partially deleted in new
chr12	42331797	42375068	chr12:42331797-42375068	0	+	42335902	42375068	789624	5	51,92,165,62,206,	0,4085,20087,23363,43065,
#Partially deleted in new
chr12	42343803	42351959	chr12:42343803-42351959	0	+	42343868	42351959	789624	2	101,75,	0,8081,
#Partially deleted in new
chr12	42347060	42347214	chr12:42347060-42347214	3	-	42347060	42347060	8553170	1	154,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	42361266	42361703	chr12:42361266-42361703	3	+	42361266	42361266	8553170	1	437,	0,
#Partially deleted in new
chr12	42386972	42393686	chr12:42386972-42393686	0	+	42386972	42386972	8553170	2	563,117,	0,6597,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	42387389	42400485	chr12:42387389-42400485	0	+	42387389	42387389	8553170	3	146,120,1632,	0,6180,11464,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	42398549	42398651	chr12:42398549-42398651	3	+	42398549	42398549	8553170	1	102,	0,
#Partially deleted in new
chr12	42431664	42433357	chr12:42431664-42433357	7	-	42431664	42431664	16724991	3	172,309,294,	0,328,1399,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	42442648	42448623	chr12:42442648-42448623	0	+	42442648	42442648	8553170	1	5975,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	42454719	42454821	chr12:42454719-42454821	3	+	42454719	42454719	8553170	1	102,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	42456756	42589770	chr12:42456756-42589770	3	-	42459808	42472516	789624	8	3909,864,187,204,138,114,180,306,	0,7638,9437,11869,12693,13489,15628,132708,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	42456762	42484444	chr12:42456762-42484444	1	-	42459808	42472516	789624	8	3903,864,187,204,138,114,180,171,	0,7632,9431,11863,12687,13483,15622,27511,
#Partially deleted in new
chr12	42458359	42590355	chr12:42458359-42590355	1	-	42459808	42472516	789624	8	2306,864,187,204,138,114,180,82,	0,6035,7834,10266,11090,11886,14025,131914,
#Partially deleted in new
chr12	42458371	42484341	chr12:42458371-42484341	1	-	42459808	42472516	789624	9	2294,864,187,204,138,114,180,228,68,	0,6023,7822,10254,11078,11874,14013,25386,25902,
#Partially deleted in new
chr12	42458371	42483672	chr12:42458371-42483672	1	-	42459808	42472516	789624	8	2294,864,187,204,138,114,180,297,	0,6023,7822,10254,11078,11874,14013,25004,
#Partially deleted in new
chr12	42458396	42469660	chr12:42458396-42469660	0	-	42458396	42458396	8553170	5	2269,864,187,204,211,	0,5998,7797,10229,11053,
#Partially deleted in new
chr12	42458824	42484298	chr12:42458824-42484298	1	-	42459808	42472516	789624	9	1841,864,187,204,138,114,177,228,25,	0,5570,7369,9801,10625,11421,13560,24933,25449,
#Partially deleted in new
chr12	42458828	42589746	chr12:42458828-42589746	0	-	42459808	42472516	789624	8	1837,864,187,204,138,114,177,282,	0,5566,7365,9797,10621,11417,13556,130636,
#Partially deleted in new
chr12	42458950	42483993	chr12:42458950-42483993	1	-	42459808	42472516	789624	8	1715,864,187,204,138,114,177,236,	0,5444,7243,9675,10499,11295,13434,24807,
#Partially deleted in new
chr12	42459264	42484306	chr12:42459264-42484306	1	-	42459808	42472516	789624	8	1401,864,187,204,138,114,180,253,	0,5130,6929,9361,10185,10981,13120,24789,
#Partially deleted in new
chr12	42459279	42483995	chr12:42459279-42483995	1	-	42459808	42472516	789624	8	1386,864,187,204,138,114,180,238,	0,5115,6914,9346,10170,10966,13105,24478,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	42459365	42466128	chr12:42459365-42466128	3	+	42459365	42459365	8553170	2	1363,1428,	0,5335,
#Partially deleted in new
chr12	42465136	42466391	chr12:42465136-42466391	0	-	42465136	42465136	8553170	2	122,198,	0,1057,
#Partially deleted in new
chr12	42468722	42589592	chr12:42468722-42589592	0	-	42468722	42472516	789624	6	107,138,114,180,122,128,	0,727,1523,3662,115636,120742,
#Partially deleted in new
chr12	42469449	42589283	chr12:42469449-42589283	0	-	42469449	42472516	789624	4	138,114,180,122,	0,796,2935,119712,
#Partially deleted in new
chr12	42469476	42483091	chr12:42469476-42483091	0	-	42469476	42472516	789624	4	111,114,180,307,	0,769,2908,13308,
#Partially deleted in new
chr12	42469504	42589676	chr12:42469504-42589676	0	-	42469504	42472516	789624	4	83,114,180,79,	0,741,2880,120093,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	42469504	42589676	chr12:42469504-42589676	0	-	42469504	42472516	789624	5	83,114,180,122,212,	0,741,2880,80703,119960,
#Partially deleted in new
chr12	42469837	42589622	chr12:42469837-42589622	0	-	42469837	42469837	8553170	5	192,114,180,122,158,	0,408,2547,114521,119627,
#Partially deleted in new
chr12	42483812	42589744	chr12:42483812-42589744	0	-	42483812	42483812	8553170	2	173,280,	0,105652,
#Partially deleted in new
chr12	42485352	42490019	chr12:42485352-42490019	3	-	42485352	42485352	8553170	2	150,297,	0,4370,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	42524754	42589746	chr12:42524754-42589746	0	-	42524754	42524754	8553170	2	292,282,	0,64710,
#Deleted in new
chr12	42627007	42627137	chr12:42627007-42627137	7	-	42627007	42627007	16724991	1	130,	0,
#Deleted in new
chr12	42636814	42637111	chr12:42636814-42637111	7	-	42636814	42636814	16724991	1	297,	0,
#Partially deleted in new
chr12	42678872	42679124	chr12:42678872-42679124	7	-	42678872	42678872	16724991	1	252,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	42692215	42717119	chr12:42692215-42717119	3	+	42692215	42692215	789624	4	61,104,209,629,	0,1612,15562,24275,
#Deleted in new
chr12	42929847	42930579	chr12:42929847-42930579	7	-	42929847	42929847	16724991	1	732,	0,
#Deleted in new
chr12	42966121	42967353	chr12:42966121-42967353	3	+	42966121	42966121	8553170	2	24,232,	0,1000,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	42979253	42996486	chr12:42979253-42996486	3	-	42979253	42979253	8553170	3	147,101,304,	0,10493,16929,
#Deleted in new
chr12	43054088	43054386	chr12:43054088-43054386	7	-	43054088	43054088	16724991	1	298,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	43155314	43163110	chr12:43155314-43163110	3	+	43155314	43155314	789624	4	551,52,90,143,	0,4078,5564,7653,
#Partially deleted in new
chr12	43353865	43551921	chr12:43353865-43551921	3	-	43354208	43551921	789624	39	433,105,92,134,92,95,130,198,171,174,168,177,162,291,165,108,120,165,165,211,127,130,173,93,118,137,182,146,105,142,144,106,41,125,84,254,160,362,91,	0,2618,15424,21513,22191,22370,22658,23499,29692,29938,45200,71648,73442,74375,74769,75751,76486,77466,78438,78735,80379,85756,86031,89925,92729,98408,98648,100041,109029,110725,112786,114734,136529,138639,139304,148286,178170,197043,197965,
#Partially deleted in new
chr12	43422818	43439712	chr12:43422818-43439712	0	-	43423693	43439712	789624	11	1106,177,162,291,165,120,165,165,211,127,91,	0,2695,4489,5422,5816,7533,8513,9485,9782,11426,16803,
#Partially deleted in new
chr12	43423575	43551921	chr12:43423575-43551921	1	-	43423693	43551921	789624	29	349,177,166,287,165,108,120,165,165,211,127,142,161,93,155,100,182,146,105,142,144,106,36,130,84,254,158,364,91,	0,1938,3732,4669,5059,6041,6776,7756,8728,9025,10669,16046,16333,20215,23019,28735,28938,30331,39319,41015,43076,45024,66819,68924,69594,78576,108460,127331,128255,
#Partially deleted in new
chr12	43423575	43551921	chr12:43423575-43551921	1	-	43423693	43551921	789624	29	349,177,162,291,165,108,120,165,165,211,127,130,173,93,118,137,182,146,105,142,144,106,41,125,84,254,160,362,91,	0,1938,3732,4665,5059,6041,6776,7756,8728,9025,10669,16046,16321,20215,23019,28698,28938,30331,39319,41015,43076,45024,66819,68929,69594,78576,108460,127333,128255,
#Partially deleted in new
chr12	43560783	43561297	chr12:43560783-43561297	7	-	43560783	43560783	16724991	2	17,461,	0,53,
#Partially deleted in new
chr12	43569768	43572038	chr12:43569768-43572038	7	-	43569768	43569768	16724991	1	2270,	0,
#Deleted in new
chr12	43633092	43633281	chr12:43633092-43633281	7	+	43633092	43633092	16724991	1	189,	0,
#Deleted in new
chr12	43659826	43661101	chr12:43659826-43661101	7	+	43659826	43659826	16724991	1	1275,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	43718992	43758817	chr12:43718992-43758817	3	-	43730375	43755245	789624	9	11710,54,281,82,99,193,160,926,88,	0,12712,17388,19317,23464,27053,29457,35343,39737,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	43728606	43758758	chr12:43728606-43758758	1	-	43730375	43755245	789624	9	2096,54,281,82,99,193,160,926,473,	0,3098,7774,9703,13850,17439,19843,25729,29679,
#Partially deleted in new
chr12	43729257	43758773	chr12:43729257-43758773	1	-	43730375	43755245	789624	9	1445,54,281,82,99,193,160,926,73,	0,2447,7123,9052,13199,16788,19192,25078,29443,
#Partially deleted in new
chr12	43729762	43758793	chr12:43729762-43758793	1	-	43730375	43748580	789624	8	940,54,281,82,99,193,160,64,	0,1942,6618,8547,12694,16283,18687,28967,
#Deleted in new
chr12	43736627	43739189	chr12:43736627-43739189	7	+	43736627	43736627	16724991	4	55,159,63,169,	0,1362,1718,2393,
#Partially deleted in new
chr12	43738332	43758759	chr12:43738332-43758759	0	-	43738332	43748580	789624	6	59,99,193,160,107,59,	0,4124,7713,10117,16003,20368,
#Partially deleted in new
chr12	43738352	43758759	chr12:43738352-43758759	0	-	43738352	43748580	789624	6	39,99,193,160,45,30,	0,4104,7693,10097,16864,20377,
#Partially deleted in new
chr12	43738828	43739854	chr12:43738828-43739854	5	+	43738828	43738828	16724991	3	98,344,140,	0,192,886,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	43739634	43741067	chr12:43739634-43741067	5	+	43739634	43739634	16724991	2	219,231,	0,1202,
#Partially deleted in new
chr12	43746213	43758767	chr12:43746213-43758767	0	-	43746213	43755245	789624	4	25,160,926,38,	0,2236,8122,12516,
#Partially deleted in new
chr12	43754866	43758759	chr12:43754866-43758759	0	-	43754866	43755245	789624	3	395,322,67,	0,3419,3826,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	43758943	43789543	chr12:43758943-43789543	1	+	43772244	43786715	0	11	73,170,183,161,65,115,110,184,63,159,2864,	0,9159,13236,13968,15021,18686,19249,23363,24718,27455,27736,
#Partially deleted in new
chr12	43758943	43786975	chr12:43758943-43786975	1	+	43772244	43786715	0	10	73,183,161,65,115,110,184,63,159,296,	0,13236,13968,15021,18686,19249,23363,24718,27455,27736,
#Partially deleted in new
chr12	43758949	43786750	chr12:43758949-43786750	0	+	43768111	43772201	789624	11	67,170,183,161,65,115,110,184,63,159,71,	0,9153,13230,13962,15015,18680,19243,23357,24712,27449,27730,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	43758949	43771326	chr12:43758949-43771326	0	+	43768111	43771326	789624	5	67,48,155,170,107,	0,1975,4352,9153,12270,
#Partially deleted in new
chr12	43758950	43786414	chr12:43758950-43786414	0	+	43768111	43772201	789624	11	642,48,170,183,161,65,115,110,184,63,16,	0,1974,9152,13229,13961,15014,18679,19242,23356,24711,27448,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	43758954	43789541	chr12:43758954-43789541	3	+	43768111	43786715	0	12	62,170,146,183,161,65,115,110,184,63,159,2862,	0,9148,12265,13225,13957,15010,18675,19238,23352,24707,27444,27725,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	43758960	43786903	chr12:43758960-43786903	0	+	43768111	43771041	789624	13	56,170,67,146,183,161,65,115,110,184,63,159,224,	0,9142,12077,12259,13219,13951,15004,18669,19232,23346,24701,27438,27719,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	43758960	43786903	chr12:43758960-43786903	0	+	43768111	43771041	789624	14	56,48,170,67,146,183,161,65,115,110,184,63,159,224,	0,1964,9142,12077,12259,13219,13951,15004,18669,19232,23346,24701,27438,27719,
#Partially deleted in new
chr12	43758960	43786903	chr12:43758960-43786903	1	+	43768111	43786715	0	13	56,48,170,146,183,161,65,115,110,184,63,159,224,	0,1964,9142,12259,13219,13951,15004,18669,19232,23346,24701,27438,27719,
#Partially deleted in new
chr12	43758966	43768592	chr12:43758966-43768592	0	+	43758966	43758966	8553170	2	50,490,	0,9136,
#Partially deleted in new
chr12	43758966	43782490	chr12:43758966-43782490	0	+	43768111	43772201	789624	9	50,48,170,183,75,65,115,110,184,	0,1958,9136,13213,13945,14998,18663,19226,23340,
#Partially deleted in new
chr12	43759035	43772956	chr12:43759035-43772956	0	+	43768111	43772201	789624	4	165,170,183,45,	0,9067,13144,13876,
#Partially deleted in new
chr12	43768111	43786715	chr12:43768111-43786715	1	+	43768111	43773972	789624	12	161,146,183,131,28,65,115,110,184,63,159,36,	0,3108,4068,4800,4933,5853,9518,10081,14195,15550,18287,18568,
#Partially deleted in new
chr12	43773794	43782472	chr12:43773794-43782472	0	+	43773794	43773794	8553170	4	235,115,110,166,	0,3835,4398,8512,
#Partially deleted in new
chr12	43793722	43806375	chr12:43793722-43806375	3	-	43795584	43806245	789624	9	2033,122,151,126,105,96,179,78,155,	0,3253,3579,3985,5675,6712,8563,10772,12498,
#Partially deleted in new
chr12	43793722	43806287	chr12:43793722-43806287	1	-	43795584	43800518	789624	10	2033,122,151,126,105,96,179,78,55,67,	0,3253,3579,3985,5675,6712,8563,10772,12108,12498,
#Partially deleted in new
chr12	43793724	43806262	chr12:43793724-43806262	0	-	43805885	43806245	789624	9	2031,122,151,126,105,96,179,78,432,	0,3251,3577,3983,5673,6710,8561,10770,12106,
#Partially deleted in new
chr12	43795492	43806249	chr12:43795492-43806249	1	-	43795584	43806245	789624	10	263,122,151,126,21,105,96,179,78,29,	0,1483,1809,2215,3072,3905,4942,6793,9002,10728,
#Partially deleted in new
chr12	43795555	43797851	chr12:43795555-43797851	0	-	43795555	43795555	8553170	4	200,122,151,144,	0,1420,1746,2152,
#Partially deleted in new
chr12	43797301	43806296	chr12:43797301-43806296	0	-	43797301	43806245	789624	8	151,126,105,96,179,78,114,76,	0,406,2096,3133,4984,7193,8222,8919,
#Partially deleted in new
chr12	43799416	43806328	chr12:43799416-43806328	0	-	43802452	43806245	789624	6	86,96,179,65,78,108,	0,1018,2869,4759,5078,6804,
#Partially deleted in new
chr12	43799461	43806300	chr12:43799461-43806300	0	-	43799461	43806245	789624	4	41,96,179,80,	0,973,2824,6759,
#Partially deleted in new
chr12	43800473	43806316	chr12:43800473-43806316	0	-	43800473	43800518	789624	5	57,179,78,172,96,	0,1812,4021,5357,5747,
#Deleted in new
chr12	43802283	43806282	chr12:43802283-43806282	0	-	43802283	43802283	8553170	5	181,65,78,172,62,	0,1892,2211,3547,3937,
#Deleted in new
chr12	43804152	43806255	chr12:43804152-43806255	0	-	43804152	43804152	8553170	2	420,35,	0,2068,
#Partially deleted in new
chr12	43835966	43844984	chr12:43835966-43844984	0	+	43835966	43835966	8553170	2	230,361,	0,8657,
#Partially deleted in new
chr12	43836082	44389758	chr12:43836082-44389758	1	+	43844651	44388064	789624	7	114,305,133,100,98,160,1733,	0,8541,108127,307442,375207,463497,551943,
#Partially deleted in new
chr12	43836097	44389758	chr12:43836097-44389758	3	+	43844651	44388672	789624	8	99,305,133,100,98,160,130,1733,	0,8526,108112,307427,375192,463482,540497,551928,
#Partially deleted in new
chr12	43836152	44389762	chr12:43836152-44389762	0	+	43844651	44211302	789624	7	44,305,133,98,160,130,1737,	0,8471,108057,375137,463427,540442,551873,
#Partially deleted in new
chr12	43844850	44388035	chr12:43844850-44388035	0	+	44143546	44388035	789624	6	78,100,98,160,130,10,	0,298674,366439,454729,531744,543175,
#Partially deleted in new
chr12	44008619	44010143	chr12:44008619-44010143	7	-	44008619	44008619	16724991	1	1524,	0,
#Partially deleted in new
chr12	44073511	44376724	chr12:44073511-44376724	0	+	44073511	44073511	8553170	5	321,100,98,160,130,	0,70013,137778,226068,303083,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	44244393	44263982	chr12:44244393-44263982	3	-	44244393	44244393	8553170	2	57,510,	0,19079,
#Deleted in new
chr12	44248431	44249004	chr12:44248431-44249004	7	-	44248431	44248431	16724991	1	573,	0,
#Partially deleted in new
chr12	44318294	44389760	chr12:44318294-44389760	0	+	44318294	44318294	8553170	3	77,130,1735,	0,58300,69731,
#Deleted in new
chr12	44498615	44499158	chr12:44498615-44499158	3	-	44498615	44498615	8553170	1	543,	0,
#Partially deleted in new
chr12	44508274	44875654	chr12:44508274-44875654	1	-	44508933	44875558	789624	20	710,225,177,194,141,96,123,126,129,103,92,103,129,83,73,97,174,151,129,148,	0,11730,13725,15016,24306,98894,102573,157209,195451,203017,206375,266472,267747,268767,268967,271388,271574,307711,366950,367232,
#Partially deleted in new
chr12	44508277	44876374	chr12:44508277-44876374	3	-	44508933	44875869	789624	20	707,225,177,194,141,96,123,126,129,103,92,103,129,83,73,97,174,151,129,560,	0,11727,13722,15013,24303,98891,102570,157206,195448,203014,206372,266469,267744,268764,268964,271385,271571,307708,366947,367537,
#Partially deleted in new
chr12	44508281	44876355	chr12:44508281-44876355	1	-	44508933	44875869	789624	21	703,225,177,194,141,96,123,126,129,103,92,103,129,83,73,97,174,151,129,86,62,	0,11723,13718,15009,24299,98887,102566,157202,195444,203010,206368,266465,267740,268760,268960,271381,271567,307704,366943,367533,368012,
#Partially deleted in new
chr12	44508281	44876315	chr12:44508281-44876315	1	-	44508933	44875558	789624	21	703,225,177,194,96,123,126,129,103,92,103,129,83,73,97,174,151,129,133,86,22,	0,11723,13718,15009,98887,102566,157202,195444,203010,206368,266465,267740,268760,268960,271381,271567,307704,366943,367225,367533,368012,
#Partially deleted in new
chr12	44508534	44876315	chr12:44508534-44876315	1	-	44508933	44875558	789624	22	450,225,177,194,141,96,123,126,129,103,92,103,129,83,73,97,174,151,129,133,86,22,	0,11470,13465,14756,24046,98634,102313,156949,195191,202757,206115,266212,267487,268507,268707,271128,271314,307451,366690,366972,367280,367759,
#Partially deleted in new
chr12	44508602	44913928	chr12:44508602-44913928	1	-	44508933	44913836	789624	21	382,225,177,194,141,96,123,126,129,103,92,103,129,83,73,97,174,151,129,86,130,	0,11402,13397,14688,23978,98566,102245,156881,195123,202689,206047,266144,267419,268439,268639,271060,271246,307383,366622,367212,405196,
#Partially deleted in new
chr12	44508627	44877097	chr12:44508627-44877097	1	-	44508933	44876725	789624	21	357,225,177,194,141,96,123,126,129,103,92,103,129,83,73,97,174,151,129,86,491,	0,11377,13372,14663,23953,98541,102220,156856,195098,202664,206022,266119,267394,268414,268614,271035,271221,307358,366597,367187,367979,
#Deleted in new
chr12	44521961	44523635	chr12:44521961-44523635	0	-	44521961	44521961	8553170	2	215,345,	0,1329,
#Partially deleted in new
chr12	44522776	44532621	chr12:44522776-44532621	0	-	44523266	44532621	789624	2	708,41,	0,9804,
#Partially deleted in new
chr12	44532514	44703780	chr12:44532514-44703780	0	-	44532514	44532514	8553170	5	207,96,123,126,55,	0,74654,78333,132969,171211,
#Partially deleted in new
chr12	44610909	44777049	chr12:44610909-44777049	0	-	44610909	44777049	789624	8	61,126,129,103,92,88,129,8,	0,54574,92816,100382,103740,163852,165112,166132,
#Partially deleted in new
chr12	44665435	44876315	chr12:44665435-44876315	0	-	44665435	44665435	8553170	13	174,129,103,92,103,129,83,73,97,174,151,129,501,	0,38290,45856,49214,109311,110586,111606,111806,114227,114413,150550,209789,210379,
#Deleted in new
chr12	44774608	44777122	chr12:44774608-44777122	0	-	44774690	44777122	789624	3	241,129,81,	0,1413,2433,
#Partially deleted in new
chr12	44774777	44921848	chr12:44774777-44921848	0	-	44774777	44875869	789624	10	72,129,83,73,97,174,151,129,86,59,	0,1244,2264,2464,4885,5071,41208,100447,101037,147012,
#Partially deleted in new
chr12	44779687	44851847	chr12:44779687-44851847	0	-	44779687	44779687	8553170	4	72,174,151,178,	0,161,36298,71982,
#Partially deleted in new
chr12	44779848	44875468	chr12:44779848-44875468	0	-	44779848	44875399	789624	3	174,151,244,	0,36137,95376,
#Partially deleted in new
chr12	44815908	44876016	chr12:44815908-44876016	1	-	44815981	44875869	789624	3	228,129,202,	0,59316,59906,
#Partially deleted in new
chr12	44815985	44875812	chr12:44815985-44875812	0	-	44815985	44875558	789624	3	151,129,306,	0,59239,59521,
#Deleted in new
chr12	44874998	44876286	chr12:44874998-44876286	0	-	44874998	44874998	8553170	2	355,472,	0,816,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	44875341	44914139	chr12:44875341-44914139	0	-	44875341	44875869	789624	4	12,86,61,341,	0,473,6437,38457,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	44880867	44880969	chr12:44880867-44880969	3	-	44880867	44880867	8553170	1	102,	0,
#Partially deleted in new
chr12	45014671	45051099	chr12:45014671-45051099	3	-	45016285	45050927	789624	4	1947,188,96,575,	0,9035,21347,35853,
#Partially deleted in new
chr12	45050900	45103107	chr12:45050900-45103107	3	+	45050900	45050900	8553170	2	448,51,	0,52156,
#Deleted in new
chr12	45063472	45065351	chr12:45063472-45065351	7	-	45063472	45063472	16724991	1	1879,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	45071768	45072843	chr12:45071768-45072843	7	+	45071768	45071768	16724991	1	1075,	0,
#Deleted in new
chr12	45117770	45117888	chr12:45117770-45117888	7	+	45117770	45117770	16724991	1	118,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	45173063	45216006	chr12:45173063-45216006	7	-	45173063	45173063	16724991	3	1579,193,67,	0,3177,42876,
#Deleted in new
chr12	45173189	45174713	chr12:45173189-45174713	5	-	45173189	45173189	16724991	1	1524,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	45176033	45216026	chr12:45176033-45216026	4	-	45176033	45176033	16724991	2	400,87,	0,39906,
#Partially deleted in new
chr12	45176426	45216041	chr12:45176426-45216041	5	-	45176426	45176426	16724991	3	7,168,102,	0,14367,39513,
#Deleted in new
chr12	45200816	45201551	chr12:45200816-45201551	7	+	45200816	45200816	16724991	1	735,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr12	45216019	45440404	chr12:45216019-45440404	1	+	45216321	45439938	789624	20	372,80,129,66,288,114,116,135,106,61,143,78,226,170,98,131,206,203,106,730,	0,85994,115275,131002,132008,132498,134639,141270,151668,162033,172141,174401,185775,187052,187419,193337,200679,205051,206937,223655,
#Partially deleted in new
chr12	45216084	45431782	chr12:45216084-45431782	1	+	45216321	45429311	789624	21	307,63,80,129,66,288,114,116,135,106,61,143,78,226,170,98,131,206,203,106,2678,	0,54377,85929,115210,130937,131943,132433,134574,141205,151603,161968,172076,174336,185710,186987,187354,193272,200614,204986,206872,213020,
#Partially deleted in new
chr12	45216119	45432351	chr12:45216119-45432351	3	+	45216321	45429311	789624	20	272,80,129,66,288,114,116,135,106,61,143,78,226,170,98,131,206,203,106,3247,	0,85894,115175,130902,131908,132398,134539,141170,151568,161933,172041,174301,185675,186952,187319,193237,200579,204951,206837,212985,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	45216119	45313512	chr12:45216119-45313512	0	+	45216321	45228235	789624	5	272,106,63,80,314,	0,12048,54342,85894,97079,
#Partially deleted in new
chr12	45256472	45256726	chr12:45256472-45256726	3	+	45256472	45256472	8553170	1	254,	0,
#Partially deleted in new
chr12	45292682	45432351	chr12:45292682-45432351	1	+	45292918	45429311	789624	20	252,80,129,66,288,114,116,135,106,61,143,78,226,170,98,131,206,203,106,3247,	0,9331,38612,54339,55345,55835,57976,64607,75005,85370,95478,97738,109112,110389,110756,116674,124016,128388,130274,136422,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	45335548	45347508	chr12:45335548-45347508	0	+	45335548	45335548	8553170	2	80,487,	0,11473,
#Deleted in new
chr12	45444765	45445438	chr12:45444765-45445438	7	+	45444765	45444765	16724991	1	673,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	45600141	45610620	chr12:45600141-45610620	0	-	45600141	45600141	8553170	2	643,82,	0,10397,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	45718045	45727775	chr12:45718045-45727775	3	-	45718045	45718045	8553170	1	9730,	0,
#Partially deleted in new
chr12	45729664	45908040	chr12:45729664-45908040	3	+	45729836	45905078	789624	21	264,94,98,134,219,68,67,251,97,210,168,82,135,197,2861,149,139,86,124,92,3107,	0,379,1552,81753,88005,91755,106924,107076,107656,107833,109664,117191,119171,119915,120371,131136,162115,162346,163755,163965,175269,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	45729885	45776329	chr12:45729885-45776329	0	+	45729885	45729885	8553170	4	43,94,98,249,	0,158,1331,46195,
#Partially deleted in new
chr12	45729915	45893918	chr12:45729915-45893918	1	+	45817698	45893725	789624	20	13,94,98,134,219,68,67,251,97,210,168,82,135,197,2861,149,139,86,124,289,	0,128,1301,81502,87754,91504,106673,106825,107405,107582,109413,116940,118920,119664,120120,130885,161864,162095,163504,163714,
#Deleted in new
chr12	45789188	45789657	chr12:45789188-45789657	3	+	45789188	45789188	8553170	1	469,	0,
#Partially deleted in new
chr12	45836760	45908040	chr12:45836760-45908040	0	+	45836760	45836760	8553170	15	231,97,210,168,83,82,135,197,2861,149,139,86,124,92,3107,	0,560,737,2568,9229,10095,12075,12819,13275,24040,55019,55250,56659,56869,68173,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	45836944	45842234	chr12:45836944-45842234	0	+	45836944	45836944	8553170	4	47,97,210,2906,	0,376,553,2384,
#Partially deleted in new
chr12	45837394	45908040	chr12:45837394-45908040	1	+	45837410	45905078	789624	13	23,210,111,82,135,197,2861,149,139,86,124,92,3107,	0,103,1991,9461,11441,12185,12641,23406,54385,54616,56025,56235,67539,
#Partially deleted in new
chr12	45852294	45908040	chr12:45852294-45908040	1	+	45852299	45904360	789624	8	602,149,139,86,124,92,57,3107,	0,8506,39485,39716,41125,41335,52047,52639,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	45874034	45874330	chr12:45874034-45874330	3	+	45874034	45874034	8553170	1	296,	0,
#Deleted in new
chr12	45880949	45882266	chr12:45880949-45882266	7	-	45880949	45880949	16724991	1	1317,	0,
#Partially deleted in new
chr12	45892042	45893888	chr12:45892042-45893888	0	+	45892042	45893558	789624	2	54,469,	0,1377,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	45919130	45990565	chr12:45919130-45990565	3	-	45922047	45964167	789624	15	3064,120,219,347,2718,107,102,110,59,65,101,78,158,82,213,	0,3332,3805,5597,7011,12375,14000,15045,15316,26118,29306,32519,42569,44976,71222,
#Partially deleted in new
chr12	45919130	45923100	chr12:45919130-45923100	0	-	45919130	45919130	8553170	3	179,120,117,	0,3332,3853,
#Partially deleted in new
chr12	45919130	45924788	chr12:45919130-45924788	0	-	45919130	45919130	8553170	4	179,120,219,61,	0,3332,3805,5597,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	45921408	45929965	chr12:45921408-45929965	1	-	45922047	45928755	789624	5	786,120,219,347,3824,	0,1054,1527,3319,4733,
#Partially deleted in new
chr12	45922047	45934510	chr12:45922047-45934510	1	-	45922047	45934231	789624	9	147,120,219,347,2718,107,102,110,64,	0,415,888,2680,4094,9458,11083,12128,12399,
#Partially deleted in new
chr12	45922355	45924788	chr12:45922355-45924788	0	-	45922405	45924788	789624	3	227,219,61,	0,580,2372,
#Partially deleted in new
chr12	45924946	45926710	chr12:45924946-45926710	0	-	45924946	45924946	8553170	2	128,569,	0,1195,
#Partially deleted in new
chr12	45926715	45992120	chr12:45926715-45992120	0	-	45926715	45961709	789624	11	2144,107,102,110,59,65,101,103,162,82,236,	0,4790,6415,7460,7731,18533,21721,24934,34980,37391,65169,
#Partially deleted in new
chr12	45928783	45935083	chr12:45928783-45935083	0	-	45928783	45928783	8553170	6	76,107,102,110,59,108,	0,2722,4347,5392,5663,6192,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	45930949	45933172	chr12:45930949-45933172	0	-	45930949	45930949	8553170	2	663,42,	0,2181,
#Partially deleted in new
chr12	45945083	45948530	chr12:45945083-45948530	0	-	45945192	45948530	789624	2	230,94,	0,3353,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	45954733	45990584	chr12:45954733-45990584	1	-	45956177	45964167	789624	4	1459,158,82,232,	0,6966,9373,35619,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	45960454	45990580	chr12:45960454-45990580	1	-	45961307	45964167	789624	4	868,158,82,228,	0,1245,3652,29898,
#Partially deleted in new
chr12	45961406	45990576	chr12:45961406-45990576	0	-	45961406	45961406	8553170	3	451,82,224,	0,2700,28946,
#Deleted in new
chr12	46004037	46004685	chr12:46004037-46004685	7	-	46004037	46004037	16724991	1	648,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr12	46183062	46269012	chr12:46183062-46269012	3	-	46188969	46239800	789624	17	6009,98,142,119,101,80,117,59,83,82,93,74,116,76,215,115,487,	0,14657,14856,15562,18035,19947,21238,21469,23017,24092,24466,25991,46090,46501,56616,60137,85463,
#Partially deleted in new
chr12	46187800	46268995	chr12:46187800-46268995	1	-	46188969	46239800	789624	16	1271,98,142,119,101,80,117,59,83,82,93,74,116,76,215,470,	0,9919,10118,10824,13297,15209,16500,16731,18279,19354,19728,21253,41352,41763,51878,80725,
#Partially deleted in new
chr12	46188564	46269119	chr12:46188564-46269119	1	-	46188969	46239800	789624	17	507,98,142,119,101,80,117,59,83,82,93,74,116,76,215,115,255,	0,9155,9354,10060,12533,14445,15736,15967,17515,18590,18964,20489,40588,40999,51114,54635,80300,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr12	46195724	46267701	chr12:46195724-46267701	1	-	46196126	46239800	789624	17	552,98,142,119,101,80,117,59,83,82,93,74,116,76,215,115,477,	0,1995,2194,2900,5373,7285,8576,8807,10355,11430,11804,13329,33428,33839,43954,47475,71500,
#Partially deleted in new
chr12	46196126	46239895	chr12:46196126-46239895	1	-	46196126	46239800	789624	15	150,98,142,119,101,80,117,59,83,82,93,74,116,76,217,	0,1593,1792,2498,4971,6883,8174,8405,9953,11028,11402,12927,33026,33437,43552,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	46197377	46198021	chr12:46197377-46198021	0	-	46197377	46197377	8553170	2	440,103,	0,541,
#Partially deleted in new
chr12	46198727	46269043	chr12:46198727-46269043	0	-	46198727	46198727	8553170	12	16,101,80,117,59,83,82,93,74,116,76,179,	0,2370,4282,5573,5804,7352,8427,8801,10326,30425,30836,70137,
#Partially deleted in new
chr12	46207582	46268806	chr12:46207582-46268806	0	-	46207582	46207582	8553170	5	39,74,116,76,281,	0,1471,21570,21981,60943,
#Partially deleted in new
chr12	46229231	46269951	chr12:46229231-46269951	0	-	46229231	46239800	789624	5	37,76,215,266,297,	0,332,10447,39633,40423,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	46239105	46239473	chr12:46239105-46239473	3	-	46239105	46239105	8553170	1	368,	0,
#Deleted in new
chr12	46268859	46270017	chr12:46268859-46270017	0	-	46268859	46268859	8553170	2	271,38,	0,1120,
#Partially deleted in new
chr12	46358188	46372867	chr12:46358188-46372867	3	-	46361110	46371293	789624	16	3021,98,145,125,101,80,168,59,83,82,93,74,116,82,202,359,	0,4095,4305,4832,5537,5735,6200,6455,6918,8675,8887,9078,12323,12587,12989,14320,
#Partially deleted in new
chr12	46358480	46372771	chr12:46358480-46372771	0	-	46367271	46371293	789624	15	2729,98,145,125,101,80,168,59,83,82,93,74,82,202,263,	0,3803,4013,4540,5245,5443,5908,6163,6626,8383,8595,8786,12295,12697,14028,
#Deleted in new
chr12	46359384	46365307	chr12:46359384-46365307	1	-	46361110	46365266	789624	9	1825,98,145,125,101,80,168,59,201,	0,2899,3109,3636,4341,4539,5004,5259,5722,
#Deleted in new
chr12	46360959	46362561	chr12:46360959-46362561	0	-	46360959	46360959	8553170	2	250,278,	0,1324,
#Partially deleted in new
chr12	46361110	46370789	chr12:46361110-46370789	1	-	46361110	46370789	789624	13	99,98,145,125,101,80,168,59,83,82,93,74,14,	0,1173,1383,1910,2615,2813,3278,3533,3996,5753,5965,6156,9665,
#Deleted in new
chr12	46361117	46362904	chr12:46361117-46362904	0	-	46361117	46361117	8553170	3	92,98,411,	0,1166,1376,
#Deleted in new
chr12	46361852	46362542	chr12:46361852-46362542	0	-	46361852	46361852	8553170	2	529,49,	0,641,
#Deleted in new
chr12	46362289	46364553	chr12:46362289-46364553	0	-	46362289	46362289	8553170	5	92,145,101,80,165,	0,204,1436,1634,2099,
#Deleted in new
chr12	46362324	46364832	chr12:46362324-46364832	0	-	46362324	46362324	8553170	7	57,145,125,101,80,168,189,	0,169,696,1401,1599,2064,2319,
#Deleted in new
chr12	46363114	46364742	chr12:46363114-46364742	0	-	46363114	46363114	8553170	4	31,101,80,354,	0,611,809,1274,
#Partially deleted in new
chr12	46364441	46367410	chr12:46364441-46367410	0	-	46364441	46364441	8553170	6	115,59,83,82,93,144,	0,202,665,2422,2634,2825,
#Partially deleted in new
chr12	46364641	46371433	chr12:46364641-46371433	0	-	46364641	46364641	8553170	8	61,83,82,93,74,116,82,256,	0,465,2222,2434,2625,5870,6134,6536,
#Deleted in new
chr12	46370511	46372446	chr12:46370511-46372446	0	-	46370511	46370511	8553170	4	116,82,202,126,	0,264,666,1809,
#Deleted in new
chr12	46370798	46372773	chr12:46370798-46372773	0	-	46370798	46370798	8553170	2	581,265,	0,1710,
#Deleted in new
chr12	46371462	46373778	chr12:46371462-46373778	3	+	46371462	46371462	8553170	2	161,466,	0,1850,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	46383678	46456268	chr12:46383678-46456268	1	+	46383678	46383678	8553170	4	35,226,130,438,	0,4068,71333,72152,
#Partially deleted in new
chr12	46384106	46387972	chr12:46384106-46387972	0	+	46384106	46384106	8553170	2	55,226,	0,3640,
#Partially deleted in new
chr12	46384232	46386991	chr12:46384232-46386991	3	-	46384232	46384232	8553170	2	436,126,	0,2633,
#Partially deleted in new
chr12	46387746	46876159	chr12:46387746-46876159	3	+	46387746	46387746	8553170	2	226,1343,	0,487070,
#Deleted in new
chr12	46388855	46392126	chr12:46388855-46392126	3	+	46388855	46388855	8553170	1	3271,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	46404643	46407166	chr12:46404643-46407166	3	+	46404643	46404643	8553170	1	2523,	0,
#Partially deleted in new
chr12	46537501	46652550	chr12:46537501-46652550	3	+	46537501	46537501	8553170	3	130,157,161,	0,33754,114888,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	46592572	46593305	chr12:46592572-46593305	7	+	46592572	46592572	16724991	1	733,	0,
#Deleted in new
chr12	46682070	46682713	chr12:46682070-46682713	7	-	46682070	46682070	16724991	1	643,	0,
#Partially deleted in new
chr12	46764760	46825997	chr12:46764760-46825997	3	-	46766700	46793071	789624	16	2042,98,145,125,101,80,276,59,83,82,93,74,116,91,231,95,	0,3549,4523,10288,12143,13528,13740,14850,15019,15188,19781,20343,23155,23767,28192,61142,
#Partially deleted in new
chr12	46766015	46825997	chr12:46766015-46825997	1	-	46766700	46793071	789624	17	787,98,145,125,101,80,276,59,83,82,93,74,116,91,231,192,95,	0,2294,3268,9033,10888,12273,12485,13595,13764,13933,18526,19088,21900,22512,26937,37587,59887,
#Deleted in new
chr12	46766302	46769304	chr12:46766302-46769304	0	-	46766302	46769304	789624	3	304,98,21,	0,2007,2981,
#Partially deleted in new
chr12	46779779	46825985	chr12:46779779-46825985	0	-	46779779	46793071	789624	9	83,82,93,74,116,91,231,80,83,	0,169,4762,5324,8136,8748,13173,44526,46123,
#Partially deleted in new
chr12	46779948	46832408	chr12:46779948-46832408	0	-	46779948	46793071	789624	7	82,93,74,116,91,226,82,	0,4593,5155,7967,8579,13004,52378,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	46970503	46972155	chr12:46970503-46972155	3	+	46970503	46970503	8553170	2	656,159,	0,1493,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	47075706	47079865	chr12:47075706-47079865	3	-	47077433	47079002	789624	2	3359,404,	0,3755,
#Deleted in new
chr12	47076497	47079642	chr12:47076497-47079642	1	-	47077433	47079002	789624	3	2568,107,181,	0,2644,2964,
#Deleted in new
chr12	47076599	47079951	chr12:47076599-47079951	1	-	47077433	47079002	789624	3	2466,102,490,	0,2547,2862,
#Partially deleted in new
chr12	47079602	47236662	chr12:47079602-47236662	3	+	47235063	47236362	789624	3	123,83,1656,	0,24510,155404,
#Partially deleted in new
chr12	47079602	47236660	chr12:47079602-47236660	1	+	47235063	47236362	789624	4	123,83,468,1654,	0,24510,136619,155404,
#Deleted in new
chr12	47135497	47135901	chr12:47135497-47135901	5	-	47135497	47135497	16724991	1	404,	0,
#Partially deleted in new
chr12	47135761	47138370	chr12:47135761-47138370	7	-	47135761	47135761	16724991	2	184,155,	0,2454,
#Partially deleted in new
chr12	47187811	47187891	chr12:47187811-47187891	3	+	47187811	47187811	5263520	1	80,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	47206378	47216434	chr12:47206378-47216434	1	-	47206378	47206378	8553170	4	210,178,122,270,	0,2902,4261,9786,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	47208419	47216435	chr12:47208419-47216435	0	-	47208419	47208419	789624	3	2342,100,52,	0,7745,7964,
#Partially deleted in new
chr12	47216586	47235992	chr12:47216586-47235992	0	+	47235423	47235992	789624	2	103,620,	0,18786,
#Partially deleted in new
chr12	47216597	47235565	chr12:47216597-47235565	0	+	47235063	47235565	789624	3	92,145,559,	0,6930,18409,
#Partially deleted in new
chr12	47223500	47235566	chr12:47223500-47235566	0	+	47235063	47235566	789624	2	172,560,	0,11506,
#Partially deleted in new
chr12	47223544	47235238	chr12:47223544-47235238	0	+	47235063	47235238	789624	3	128,116,232,	0,379,11462,
#Partially deleted in new
chr12	47237733	47279021	chr12:47237733-47279021	3	-	47237733	47237733	8553170	2	557,106,	0,41182,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	47248123	47249285	chr12:47248123-47249285	1	+	47248123	47248123	8553170	2	178,151,	0,1011,
#Deleted in new
chr12	47265664	47266108	chr12:47265664-47266108	3	+	47265664	47265664	8553170	1	444,	0,
#Deleted in new
chr12	47341613	47342089	chr12:47341613-47342089	7	-	47341613	47341613	16724991	1	476,	0,
#Deleted in new
chr12	47346165	47346297	chr12:47346165-47346297	3	-	47346165	47346165	8553170	1	132,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	47353753	47369935	chr12:47353753-47369935	3	+	47353753	47353753	8553170	3	129,133,278,	0,13538,15904,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	47364185	47364269	chr12:47364185-47364269	3	-	47364185	47364185	5263520	1	84,	0,
#Partially deleted in new
chr12	47377682	47389646	chr12:47377682-47389646	1	+	47377682	47377682	8553170	2	98,1463,	0,10501,
#Partially deleted in new
chr12	47414650	47420179	chr12:47414650-47420179	0	+	47414650	47414650	8553170	2	582,258,	0,5271,
#Deleted in new
chr12	47463086	47463621	chr12:47463086-47463621	7	+	47463086	47463086	16724991	2	177,293,	0,242,
#Deleted in new
chr12	47484688	47485722	chr12:47484688-47485722	7	+	47484688	47484688	16724991	1	1034,	0,
#Deleted in new
chr12	47593207	47593440	chr12:47593207-47593440	7	+	47593207	47593207	16724991	1	233,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr12	47661248	47706061	chr12:47661248-47706061	3	-	47663504	47702840	0	17	2342,101,98,187,239,102,71,122,128,126,71,122,128,123,141,159,110,	0,5731,6505,7667,8858,18244,18455,20447,25531,26627,27876,29269,35027,36348,40215,41439,44703,
#Partially deleted in new
chr12	47663289	47664843	chr12:47663289-47664843	0	-	47663289	47663289	8553170	2	301,254,	0,1300,
#Partially deleted in new
chr12	47663291	47706026	chr12:47663291-47706026	1	-	47663504	47696343	0	16	299,101,98,187,239,102,71,122,128,126,71,122,128,123,141,75,	0,3688,4462,5624,6815,16201,16412,18404,23488,24584,25833,27226,32984,34305,38172,42660,
#Partially deleted in new
chr12	47663292	47705986	chr12:47663292-47705986	1	-	47663504	47702840	0	16	298,101,98,187,239,71,122,128,126,71,122,128,123,141,159,35,	0,3687,4461,5623,6814,16411,18403,23487,24583,25832,27225,32983,34304,38171,39395,42659,
#Partially deleted in new
chr12	47695941	47697701	chr12:47695941-47697701	0	-	47695941	47695941	8553170	2	462,105,	0,1655,
#Deleted in new
chr12	47699400	47699917	chr12:47699400-47699917	3	-	47699400	47699400	8553170	1	517,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	47700014	47702816	chr12:47700014-47702816	0	-	47700014	47700014	8553170	3	150,141,129,	0,1449,2673,
#Partially deleted in new
chr12	47701190	47705999	chr12:47701190-47705999	0	-	47701190	47701190	8553170	3	414,159,48,	0,1497,4761,
#Deleted in new
chr12	47706093	47706550	chr12:47706093-47706550	0	+	47706093	47706093	8553170	1	457,	0,
#Partially deleted in new
chr12	47709733	47725567	chr12:47709733-47725567	1	-	47710801	47725413	789624	9	1186,143,107,114,200,169,138,66,209,	0,1899,2782,3541,6566,7156,7784,8395,15625,
#Partially deleted in new
chr12	47709744	47725536	chr12:47709744-47725536	3	-	47710801	47725413	789624	10	1175,143,107,114,200,169,138,66,123,178,	0,1888,2771,3530,6555,7145,7773,8384,11008,15614,
#Partially deleted in new
chr12	47710453	47725534	chr12:47710453-47725534	1	-	47710801	47725413	789624	8	466,143,107,114,200,169,138,176,	0,1179,2062,2821,5846,6436,7064,14905,
#Partially deleted in new
chr12	47716378	47717879	chr12:47716378-47717879	0	-	47716378	47716378	8553170	3	121,169,362,	0,511,1139,
#Deleted in new
chr12	47728150	47730598	chr12:47728150-47730598	3	-	47728150	47728150	8553170	1	2448,	0,
#Deleted in new
chr12	47731907	47732351	chr12:47731907-47732351	3	+	47731907	47731907	8553170	1	444,	0,
#Partially deleted in new
chr12	47734366	47758645	chr12:47734366-47758645	1	-	47737566	47758556	789624	28	3319,72,55,65,88,51,91,182,126,98,147,82,40,83,151,79,89,113,147,77,61,85,169,122,107,54,213,95,	0,3655,3826,4323,4776,5774,5938,6275,6548,7138,9163,9620,12493,13177,13345,13707,14087,14452,15023,15374,15563,15974,16681,17032,17356,17549,23499,24184,
#Partially deleted in new
chr12	47734671	47758461	chr12:47734671-47758461	1	-	47737566	47757958	789624	28	3014,72,55,65,88,51,91,182,126,98,147,82,40,83,151,79,89,113,147,77,61,85,169,122,107,54,213,90,	0,3350,3521,4018,4471,5469,5633,5970,6243,6833,8858,9315,12188,12872,13040,13402,13782,14147,14718,15069,15258,15669,16376,16727,17051,17244,23194,23700,
#Partially deleted in new
chr12	47737243	47758572	chr12:47737243-47758572	0	-	47750404	47758556	789624	24	442,72,55,65,88,51,91,182,126,98,147,82,40,83,151,79,89,113,147,77,61,85,213,22,	0,778,949,1446,1899,2897,3061,3398,3671,4261,6286,6743,9616,10300,10468,10830,11210,11575,12146,12497,12686,13097,20622,21307,
#Partially deleted in new
chr12	47737245	47771034	chr12:47737245-47771034	3	-	47737566	47757958	789624	28	440,72,55,65,88,51,91,182,126,98,147,82,40,83,151,79,89,113,147,77,61,85,169,122,107,54,213,178,	0,776,947,1444,1897,2895,3059,3396,3669,4259,6284,6741,9614,10298,10466,10828,11208,11573,12144,12495,12684,13095,13802,14153,14477,14670,20620,33611,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	47737255	47744906	chr12:47737255-47744906	0	-	47737255	47737255	8553170	12	430,72,55,65,88,51,91,182,126,98,147,920,	0,766,937,1434,1887,2885,3049,3386,3659,4249,6274,6731,
#Partially deleted in new
chr12	47737255	47758838	chr12:47737255-47758838	0	-	47737255	47737255	8553170	25	430,72,55,65,88,51,91,126,98,147,82,40,83,151,79,1083,77,61,85,169,122,107,54,213,288,	0,766,937,1434,1887,2885,3049,3659,4249,6274,6731,9604,10288,10456,10818,11198,12485,12674,13085,13792,14143,14467,14660,20610,21295,
#Partially deleted in new
chr12	47737255	47758774	chr12:47737255-47758774	0	-	47737255	47737255	8553170	26	430,72,55,65,88,51,91,126,98,147,82,40,83,151,79,478,147,77,61,85,169,122,107,54,213,224,	0,766,937,1434,1887,2885,3049,3659,4249,6274,6731,9604,10288,10456,10818,11198,12134,12485,12674,13085,13792,14143,14467,14660,20610,21295,
#Partially deleted in new
chr12	47737256	47758856	chr12:47737256-47758856	1	-	47737566	47758556	789624	29	429,72,55,65,88,51,91,182,126,98,147,82,40,83,151,79,89,113,147,77,61,85,169,122,107,54,213,16,202,	0,765,936,1433,1886,2884,3048,3385,3658,4248,6273,6730,9603,10287,10455,10817,11197,11562,12133,12484,12673,13084,13791,14142,14466,14659,20609,21294,21398,
#Deleted in new
chr12	47737256	47742292	chr12:47737256-47742292	0	-	47737256	47737256	8553170	10	429,72,55,65,88,51,91,182,126,788,	0,765,936,1433,1886,2884,3048,3385,3658,4248,
#Partially deleted in new
chr12	47737539	47771040	chr12:47737539-47771040	1	-	47737566	47757958	789624	27	146,72,55,65,88,51,37,182,126,98,82,40,83,151,79,89,113,147,77,61,85,169,122,107,54,213,184,	0,482,653,1150,1603,2601,2765,3102,3375,3965,6447,9320,10004,10172,10534,10914,11279,11850,12201,12390,12801,13508,13859,14183,14376,20326,33317,
#Deleted in new
chr12	47738195	47739724	chr12:47738195-47739724	0	-	47738195	47738195	8553170	3	52,65,582,	0,494,947,
#Deleted in new
chr12	47738743	47741602	chr12:47738743-47741602	0	-	47739412	47741602	789624	8	11,88,48,51,91,182,126,98,	0,399,627,1397,1561,1898,2171,2761,
#Deleted in new
chr12	47739166	47741898	chr12:47739166-47741898	0	-	47739166	47739166	8553170	5	64,51,91,126,394,	0,974,1138,1748,2338,
#Deleted in new
chr12	47739458	47740395	chr12:47739458-47740395	0	-	47739458	47739458	8553170	2	733,91,	0,846,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	47744452	47758645	chr12:47744452-47758645	1	-	47746658	47758556	789624	16	2447,83,151,79,89,113,147,77,61,85,169,122,107,54,213,95,	0,3091,3259,3621,4001,4366,4937,5288,5477,5888,6595,6946,7270,7463,13413,14098,
#Deleted in new
chr12	47746856	47748912	chr12:47746856-47748912	0	-	47746856	47746856	8553170	4	43,83,198,459,	0,687,855,1597,
#Deleted in new
chr12	47747718	47751169	chr12:47747718-47751169	0	-	47749751	47751169	789624	9	144,79,89,113,147,70,61,85,122,	0,355,735,1100,1671,2022,2211,2622,3329,
#Partially deleted in new
chr12	47749952	47758438	chr12:47749952-47758438	0	-	47749952	47757958	789624	8	38,85,169,122,107,54,213,67,	0,388,1095,1446,1770,1963,7913,8419,
#Partially deleted in new
chr12	47751169	47758183	chr12:47751169-47758183	0	-	47751169	47757958	789624	5	47,122,107,54,318,	0,229,553,746,6696,
#Partially deleted in new
chr12	47752561	47758187	chr12:47752561-47758187	0	-	47752561	47752561	8553170	2	251,322,	0,5304,
#Partially deleted in new
chr12	47753915	47779171	chr12:47753915-47779171	0	+	47779062	47779171	789624	4	112,211,151,144,	0,1786,18254,25112,
#Partially deleted in new
chr12	47753929	47756485	chr12:47753929-47756485	0	+	47753929	47753929	8553170	2	98,784,	0,1772,
#Partially deleted in new
chr12	47758577	47780307	chr12:47758577-47780307	1	+	47779062	47780281	789624	5	83,186,151,168,163,	0,1638,13592,20450,21567,
#Partially deleted in new
chr12	47758993	47779111	chr12:47758993-47779111	0	+	47779062	47779111	789624	4	156,186,151,84,	0,1222,13176,20034,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	47768528	47769648	chr12:47768528-47769648	3	+	47768528	47768528	8553170	1	1120,	0,
#Partially deleted in new
chr12	47771586	47782751	chr12:47771586-47782751	1	+	47779062	47780281	789624	5	26,151,168,145,534,	0,583,7441,8558,10631,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	47773207	47782753	chr12:47773207-47782753	3	+	47773304	47780281	789624	3	233,168,2609,	0,5820,6937,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	47773214	47780824	chr12:47773214-47780824	0	+	47773304	47779054	789624	3	222,168,680,	0,5813,6930,
#Deleted in new
chr12	47778354	47779193	chr12:47778354-47779193	0	+	47778354	47778354	8553170	2	293,166,	0,673,
#Deleted in new
chr12	47778365	47779192	chr12:47778365-47779192	0	+	47778365	47778365	8553170	3	282,120,165,	0,455,662,
#Partially deleted in new
chr12	47782721	47819785	chr12:47782721-47819785	3	-	47783840	47819785	0	26	1165,139,85,134,119,98,120,88,56,108,50,121,134,220,174,197,181,111,92,126,116,112,91,188,51,19,	0,1357,2665,3030,3863,4990,5323,6539,6801,7091,8537,8864,9149,10647,12038,12462,12865,13184,13485,14295,14662,15386,15840,16063,19502,37045,
#Partially deleted in new
chr12	47782721	47819866	chr12:47782721-47819866	1	-	47783840	47819785	0	25	1165,139,85,134,119,98,120,88,56,108,50,121,134,220,174,197,181,92,126,116,112,91,188,51,100,	0,1357,2665,3030,3863,4990,5323,6539,6801,7091,8537,8864,9149,10647,12038,12462,12865,13485,14295,14662,15386,15840,16063,19502,37045,
#Partially deleted in new
chr12	47782725	47793498	chr12:47782725-47793498	0	-	47782725	47782725	8553170	11	1161,1393,134,119,98,120,88,56,1496,121,1628,	0,1353,3026,3859,4986,5319,6535,6797,7087,8860,9145,
#Partially deleted in new
chr12	47782725	47798189	chr12:47782725-47798189	0	-	47782725	47782725	8553170	21	1161,139,85,134,119,98,120,88,56,108,50,121,799,220,174,197,181,92,126,116,82,	0,1353,2661,3026,3859,4986,5319,6535,6797,7087,8533,8860,9145,10643,12034,12458,12861,13481,14291,14658,15382,
#Partially deleted in new
chr12	47782725	47793542	chr12:47782725-47793542	0	-	47792658	47793542	789624	15	1161,139,85,134,119,98,120,88,56,108,50,121,134,132,174,	0,1353,2661,3026,3859,4986,5319,6535,6797,7087,8533,8860,9145,9812,10643,
#Partially deleted in new
chr12	47783515	47792004	chr12:47783515-47792004	0	-	47783840	47792004	789624	11	371,139,85,134,119,98,120,108,50,121,134,	0,563,1871,2236,3069,4196,4529,6297,7743,8070,8355,
#Deleted in new
chr12	47783637	47785381	chr12:47783637-47785381	0	-	47783637	47783637	8553170	3	249,139,149,	0,441,1595,
#Partially deleted in new
chr12	47783650	47819886	chr12:47783650-47819886	1	-	47783840	47819785	0	25	236,139,85,134,119,98,120,88,56,108,50,121,134,220,174,197,181,111,92,126,116,112,91,188,120,	0,428,1736,2101,2934,4061,4394,5610,5872,6162,7608,7935,8220,9718,11109,11533,11936,12255,12556,13366,13733,14457,14911,15134,36116,
#Partially deleted in new
chr12	47783673	47799140	chr12:47783673-47799140	0	-	47795762	47798925	789624	23	213,139,85,134,119,98,120,88,56,108,50,121,134,220,174,197,181,84,126,116,112,91,356,	0,405,1713,2078,2911,4038,4371,5587,5849,6139,7585,7912,8197,9695,11086,11510,11913,12541,13343,13710,14434,14888,15111,
#Partially deleted in new
chr12	47783720	47802512	chr12:47783720-47802512	1	-	47784121	47802505	789624	27	166,139,107,85,134,119,98,120,88,56,108,50,121,134,220,174,197,181,111,92,126,116,112,91,188,51,77,	0,358,974,1666,2031,2864,3991,4324,5540,5802,6092,7538,7865,8150,9648,11039,11463,11866,12185,12486,13296,13663,14387,14841,15064,18503,18715,
#Partially deleted in new
chr12	47783799	47786667	chr12:47783799-47786667	0	-	47785398	47786667	789624	5	87,139,85,175,83,	0,279,1587,1911,2785,
#Partially deleted in new
chr12	47783840	47820612	chr12:47783840-47820612	1	-	47783840	47798925	0	26	46,139,85,134,119,98,120,88,56,108,50,121,134,220,174,197,181,111,92,126,116,112,91,188,51,59,	0,238,1546,1911,2744,3871,4204,5420,5682,5972,7418,7745,8030,9528,10919,11343,11746,12065,12366,13176,13543,14267,14721,14944,18383,36713,
#Deleted in new
chr12	47784922	47786002	chr12:47784922-47786002	3	+	47784922	47784922	8553170	1	1080,	0,
#Partially deleted in new
chr12	47785450	47788169	chr12:47785450-47788169	0	-	47785450	47785450	8553170	3	435,119,458,	0,1134,2261,
#Partially deleted in new
chr12	47788095	47792000	chr12:47788095-47792000	0	-	47788888	47792000	789624	8	69,117,88,56,108,50,121,130,	0,739,1165,1427,1717,3163,3490,3775,
#Deleted in new
chr12	47788425	47788971	chr12:47788425-47788971	3	+	47788425	47788425	8553170	1	546,	0,
#Deleted in new
chr12	47790376	47793386	chr12:47790376-47793386	0	-	47790376	47790376	8553170	5	87,50,121,134,18,	0,882,1209,1494,2992,
#Deleted in new
chr12	47794806	47795604	chr12:47794806-47795604	0	-	47794806	47794806	8553170	2	127,421,	0,377,
#Deleted in new
chr12	47794835	47795850	chr12:47794835-47795850	0	-	47794835	47794835	8553170	3	98,197,264,	0,348,751,
#Partially deleted in new
chr12	47794868	47797492	chr12:47794868-47797492	0	-	47795589	47797492	789624	7	65,197,24,111,92,126,109,	0,315,718,1037,1338,2148,2515,
#Partially deleted in new
chr12	47795376	47819883	chr12:47795376-47819883	0	-	47797415	47819785	789624	6	4,181,116,112,91,117,	0,210,2007,2731,3185,24390,
#Partially deleted in new
chr12	47795666	47819875	chr12:47795666-47819875	0	-	47795666	47819785	789624	9	101,92,126,44,112,91,188,51,109,	0,540,1350,1717,2441,2895,3118,6557,24100,
#Partially deleted in new
chr12	47797106	47813051	chr12:47797106-47813051	0	-	47797106	47798925	789624	6	36,44,112,91,188,122,	0,277,1001,1455,1678,15823,
#Partially deleted in new
chr12	47797117	47819886	chr12:47797117-47819886	0	-	47797117	47819785	789624	6	25,44,112,91,188,120,	0,266,990,1444,1667,22649,
#Partially deleted in new
chr12	47797383	47833132	chr12:47797383-47833132	0	-	47797383	47798925	789624	6	116,112,91,188,51,87,	0,724,1178,1401,4840,35662,
#Partially deleted in new
chr12	47797383	47820601	chr12:47797383-47820601	0	-	47797383	47798925	789624	5	116,112,91,188,48,	0,724,1178,1401,23170,
#Partially deleted in new
chr12	47797429	47813051	chr12:47797429-47813051	0	-	47797429	47798925	789624	5	70,112,91,188,122,	0,678,1132,1355,15500,
#Partially deleted in new
chr12	47798113	47819262	chr12:47798113-47819262	0	-	47798113	47798925	789624	5	106,91,188,51,143,	0,448,671,4110,21006,
#Partially deleted in new
chr12	47798117	47819961	chr12:47798117-47819961	0	-	47798117	47819785	789624	4	102,91,188,195,	0,444,667,21649,
#Partially deleted in new
chr12	47798187	47820573	chr12:47798187-47820573	0	-	47798187	47798925	789624	4	32,91,188,91,	0,374,597,22295,
#Partially deleted in new
chr12	47798559	47819980	chr12:47798559-47819980	0	-	47798559	47798925	789624	5	93,188,51,23,214,	0,225,3664,20560,21207,
#Partially deleted in new
chr12	47798639	47813484	chr12:47798639-47813484	0	-	47798639	47798925	789624	4	13,188,51,112,	0,145,3584,14733,
#Deleted in new
chr12	47817450	47817966	chr12:47817450-47817966	3	-	47817450	47817450	8553170	1	516,	0,
#Partially deleted in new
chr12	47826853	47834521	chr12:47826853-47834521	0	+	47826853	47826853	8553170	2	60,283,	0,7385,
#Partially deleted in new
chr12	47829493	47834554	chr12:47829493-47834554	0	+	47829493	47829493	8553170	2	37,316,	0,4745,
#Deleted in new
chr12	47831348	47834715	chr12:47831348-47834715	0	+	47831348	47831348	8553170	2	105,477,	0,2890,
#Partially deleted in new
chr12	47831374	47837898	chr12:47831374-47837898	3	+	47831374	47831374	8553170	3	79,413,81,	0,2864,6443,
#Deleted in new
chr12	47831374	47834536	chr12:47831374-47834536	0	+	47831374	47831374	8553170	3	79,184,298,	0,779,2864,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	47841536	47943048	chr12:47841536-47943048	3	-	47844745	47879113	0	10	3469,117,152,172,121,185,131,148,81,186,	0,4798,5120,14093,15592,15967,23510,37431,41157,101326,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	47841536	47905022	chr12:47841536-47905022	1	-	47844745	47879113	0	10	3469,117,152,172,121,185,131,148,81,68,	0,4798,5120,14093,15592,15967,23510,37431,41157,63418,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	47841538	47905031	chr12:47841538-47905031	1	-	47844745	47879113	0	11	3467,117,152,172,121,185,131,148,81,122,77,	0,4796,5118,14091,15590,15965,23508,37429,41155,58298,63416,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	47842627	47905003	chr12:47842627-47905003	1	-	47844745	47904630	0	10	2378,117,152,172,121,185,131,148,81,440,	0,3707,4029,13002,14501,14876,22419,36340,40066,61936,
#Partially deleted in new
chr12	47844469	47905022	chr12:47844469-47905022	0	-	47878963	47879113	789624	9	536,117,152,172,121,185,131,300,68,	0,1865,2187,11160,12659,13034,20577,34346,60485,
#Partially deleted in new
chr12	47855633	47905016	chr12:47855633-47905016	0	-	47855633	47879113	789624	7	168,121,185,131,148,122,62,	0,1495,1870,9413,23334,44203,49321,
#Partially deleted in new
chr12	47857647	47882935	chr12:47857647-47882935	0	-	47857647	47879113	789624	4	41,131,148,242,	0,7399,21320,25046,
#Partially deleted in new
chr12	47857660	47905040	chr12:47857660-47905040	0	-	47857660	47879113	789624	6	28,131,148,81,122,86,	0,7386,21307,25033,42176,47294,
#Partially deleted in new
chr12	47882648	47901525	chr12:47882648-47901525	3	+	47882648	47882648	8553170	4	64,437,436,350,	0,13958,15696,18527,
#Deleted in new
chr12	47905121	47906865	chr12:47905121-47906865	3	+	47905121	47905121	8553170	1	1744,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	47960496	47963469	chr12:47960496-47963469	3	-	47960496	47960496	8553170	1	2973,	0,
#Deleted in new
chr12	47963568	47968263	chr12:47963568-47968263	0	+	47964236	47966098	789624	7	65,215,64,84,50,54,131,	0,640,1713,2520,3114,3639,4564,
#Deleted in new
chr12	47963583	47968849	chr12:47963583-47968849	1	+	47964236	47968229	789624	8	50,215,64,160,84,50,54,717,	0,625,1698,2254,2505,3099,3624,4549,
#Deleted in new
chr12	47963583	47968171	chr12:47963583-47968171	0	+	47963583	47963583	8553170	6	50,215,948,50,54,39,	0,625,1698,3099,3624,4549,
#Deleted in new
chr12	47963595	47965522	chr12:47963595-47965522	0	+	47963595	47963595	8553170	3	38,279,241,	0,549,1686,
#Deleted in new
chr12	47963595	47968200	chr12:47963595-47968200	1	+	47964236	47968143	789624	3	38,215,68,	0,613,4537,
#Deleted in new
chr12	47963600	47964765	chr12:47963600-47964765	0	+	47963600	47963600	8553170	2	33,557,	0,608,
#Deleted in new
chr12	47963604	47968229	chr12:47963604-47968229	1	+	47964236	47968229	789624	8	29,215,64,160,141,50,54,97,	0,604,1677,2233,2484,3078,3603,4528,
#Deleted in new
chr12	47963606	47966726	chr12:47963606-47966726	0	+	47965994	47966726	789624	6	27,143,64,160,141,44,	0,674,1675,2231,2482,3076,
#Deleted in new
chr12	47963606	47968376	chr12:47963606-47968376	1	+	47964236	47968229	789624	7	27,106,120,141,50,54,244,	0,602,2271,2482,3076,3601,4526,
#Deleted in new
chr12	47963608	47968256	chr12:47963608-47968256	1	+	47964236	47968229	789624	8	25,215,64,160,84,50,54,124,	0,600,1673,2229,2480,3074,3599,4524,
#Deleted in new
chr12	47963619	47968878	chr12:47963619-47968878	3	+	47964236	47968229	789624	8	85,215,64,160,141,50,54,746,	0,589,1662,2218,2469,3063,3588,4513,
#Deleted in new
chr12	47963634	47968849	chr12:47963634-47968849	1	+	47964236	47968229	789624	8	70,215,64,160,84,50,54,717,	0,574,1647,2203,2454,3048,3573,4498,
#Deleted in new
chr12	47963634	47967065	chr12:47963634-47967065	1	+	47964236	47966733	789624	6	70,215,64,160,84,383,	0,574,1647,2203,2454,3048,
#Deleted in new
chr12	47963637	47965665	chr12:47963637-47965665	0	+	47963637	47963637	8553170	3	67,215,384,	0,571,1644,
#Deleted in new
chr12	47963857	47968187	chr12:47963857-47968187	0	+	47964236	47968187	789624	7	112,106,120,84,50,54,55,	0,351,2020,2231,2825,3350,4275,
#Deleted in new
chr12	47964208	47968434	chr12:47964208-47968434	0	+	47964236	47964449	789624	4	254,50,54,302,	0,2474,2999,3924,
#Deleted in new
chr12	47964212	47968336	chr12:47964212-47968336	0	+	47964236	47966686	789624	5	211,64,50,54,204,	0,1069,2470,2995,3920,
#Deleted in new
chr12	47964240	47968211	chr12:47964240-47968211	0	+	47964240	47968211	789624	3	183,64,79,	0,1041,3892,
#Deleted in new
chr12	47965652	47966450	chr12:47965652-47966450	0	+	47965652	47965652	8553170	2	345,362,	0,436,
#Deleted in new
chr12	47965927	47968488	chr12:47965927-47968488	0	+	47965927	47968349	789624	5	70,84,50,54,233,	0,161,755,1280,2328,
#Deleted in new
chr12	47965963	47967192	chr12:47965963-47967192	0	+	47965963	47966733	789624	3	34,141,510,	0,125,719,
#Deleted in new
chr12	47966555	47968488	chr12:47966555-47968488	0	+	47966555	47966555	8553170	3	177,54,356,	0,652,1577,
#Partially deleted in new
chr12	47972964	48004486	chr12:47972964-48004486	3	-	47973406	48004321	0	54	589,243,188,289,108,54,108,54,108,54,108,108,162,54,54,108,54,54,54,54,108,99,45,54,54,54,54,99,54,99,54,108,54,99,45,99,54,45,54,45,54,54,54,54,54,45,78,102,54,33,33,17,207,250,	0,1124,1710,2352,2998,3549,3847,4137,4355,4635,5045,5326,5632,6546,7044,7589,7950,8378,8811,9142,9537,9883,10128,10420,10718,11122,11581,12030,12569,12763,12947,13371,13870,14113,14304,14646,16263,16796,19913,20493,20844,21029,21459,22290,22745,22910,23583,24641,24906,25067,25204,25450,26954,31272,
#Deleted in new
chr12	47973200	47988471	chr12:47973200-47988471	0	-	47973200	47973200	8553170	37	353,243,188,289,108,54,108,54,108,54,108,108,162,54,54,108,54,54,54,216,108,99,45,54,54,54,54,99,54,99,54,108,54,99,45,99,46,	0,888,1474,2116,2762,3313,3611,3901,4119,4399,4809,5090,5396,6310,6808,7353,7714,8142,8575,8744,9301,9647,9892,10184,10482,10886,11345,11794,12333,12527,12711,13135,13634,13877,14068,14410,15225,
#Partially deleted in new
chr12	47973406	48004506	chr12:47973406-48004506	1	-	47973406	48004321	0	53	147,243,188,289,108,54,108,54,108,54,108,108,162,54,54,108,54,54,54,54,108,99,45,54,54,54,54,99,54,99,54,108,54,99,45,99,54,45,54,45,54,54,54,54,54,45,78,102,54,33,33,17,270,	0,682,1268,1910,2556,3107,3405,3695,3913,4193,4603,4884,5190,6104,6602,7147,7508,7936,8369,8700,9095,9441,9686,9978,10276,10680,11139,11588,12127,12321,12505,12929,13428,13671,13862,14204,15821,16354,19471,20051,20402,20587,21017,21848,22303,22468,23141,24199,24464,24625,24762,25008,30830,
#Deleted in new
chr12	47975352	47977445	chr12:47975352-47977445	0	-	47975352	47975352	8553170	6	253,108,54,108,54,126,	0,610,1161,1459,1749,1967,
#Deleted in new
chr12	47981342	47983855	chr12:47981342-47983855	0	-	47981342	47981342	8553170	8	54,54,54,108,99,45,54,173,	0,433,764,1159,1505,1750,2042,2340,
#Deleted in new
chr12	47997614	48004449	chr12:47997614-48004449	0	-	47997614	47997614	8553170	8	93,54,33,33,17,207,110,213,	0,256,417,554,800,2304,3370,6622,
#Deleted in new
chr12	47998168	47998859	chr12:47998168-47998859	0	-	47998168	47998168	8553170	2	33,445,	0,246,
#Deleted in new
chr12	47999696	48004554	chr12:47999696-48004554	0	-	47999696	47999696	8553170	2	429,318,	0,4540,
#Deleted in new
chr12	48002621	48004362	chr12:48002621-48004362	0	-	48002621	48002621	8553170	2	420,126,	0,1615,
#Partially deleted in new
chr12	48005276	48011227	chr12:48005276-48011227	3	-	48005276	48005276	8553170	4	227,129,158,36,	0,324,778,5915,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	48007980	48011227	chr12:48007980-48011227	1	-	48007980	48007980	8553170	5	81,104,165,144,36,	0,566,1380,2446,3211,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	48011303	48025469	chr12:48011303-48025469	3	+	48011303	48011303	8553170	4	255,137,85,2635,	0,2750,5893,11531,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	48019770	48025382	chr12:48019770-48025382	3	-	48019770	48019770	8553170	2	399,563,	0,5049,
#Deleted in new
chr12	48039783	48040761	chr12:48039783-48040761	3	-	48039783	48039783	8553170	1	978,	0,
#Partially deleted in new
chr12	48042897	48105834	chr12:48042897-48105834	0	-	48088918	48101472	789624	19	2487,96,85,80,204,132,156,85,39,55,284,104,172,160,131,85,131,48,433,	0,3458,4080,5103,6031,20812,22167,22698,24029,28769,31426,31792,40693,45903,46265,53445,55096,58571,62504,
#Partially deleted in new
chr12	48042973	48105808	chr12:48042973-48105808	3	-	48045321	48101472	0	18	2411,96,85,80,204,132,156,85,39,55,284,104,172,160,85,131,48,352,	0,3382,4004,5027,5955,20736,22091,22622,23953,28693,31350,31716,40617,45827,53369,55020,58495,62483,
#Partially deleted in new
chr12	48045321	48106308	chr12:48045321-48106308	1	-	48045321	48101472	0	18	63,96,85,80,204,132,156,85,39,55,284,104,172,160,85,131,48,281,	0,1034,1656,2679,3607,18388,19743,20274,21605,26345,29002,29368,38269,43479,51021,52672,56147,60706,
#Partially deleted in new
chr12	48045321	48101472	chr12:48045321-48101472	1	-	48045321	48101472	0	17	63,93,85,80,204,132,156,85,39,55,284,104,172,160,85,131,4,	0,1034,1656,2679,3607,18388,19743,20274,21605,26345,29002,29368,38269,43479,51021,52672,56147,
#Deleted in new
chr12	48054812	48055591	chr12:48054812-48055591	7	-	48054812	48054812	16724991	1	779,	0,
#Deleted in new
chr12	48054970	48055253	chr12:48054970-48055253	5	-	48054970	48054970	16724991	1	283,	0,
#Partially deleted in new
chr12	48063630	48065680	chr12:48063630-48065680	0	-	48063630	48063630	8553170	3	211,156,85,	0,1434,1965,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	48080083	48096427	chr12:48080083-48096427	0	-	48080083	48080083	8553170	5	417,172,160,131,85,	0,3507,8717,9079,16259,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	48080092	48098034	chr12:48080092-48098034	0	-	48080092	48080092	8553170	5	408,172,160,85,41,	0,3498,8708,16250,17901,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	48081318	48081428	chr12:48081318-48081428	3	+	48081318	48081318	8553170	1	110,	0,
#Partially deleted in new
chr12	48085061	48085421	chr12:48085061-48085421	7	+	48085061	48085061	16724991	1	360,	0,
#Partially deleted in new
chr12	48088552	48106046	chr12:48088552-48106046	0	-	48088552	48088552	8553170	5	408,85,131,48,19,	0,7790,9441,12916,17475,
#Partially deleted in new
chr12	48097736	48106066	chr12:48097736-48106066	0	-	48097736	48097736	8553170	3	388,48,39,	0,3732,8291,
#Partially deleted in new
chr12	48105138	48146079	chr12:48105138-48146079	3	+	48122774	48145708	0	23	281,93,74,78,190,166,45,109,96,93,126,65,64,150,71,88,153,165,62,112,100,106,516,	0,17628,25224,26177,27729,28176,29093,29582,29804,30152,32582,34146,34710,35583,36172,36601,36775,37643,38614,38907,39892,40071,40425,
#Partially deleted in new
chr12	48105481	48132980	chr12:48105481-48132980	0	+	48122774	48132980	789624	5	236,93,74,78,113,	0,17285,24881,25834,27386,
#Partially deleted in new
chr12	48105620	48145911	chr12:48105620-48145911	1	+	48122774	48145708	0	23	190,93,74,78,190,166,45,109,96,93,126,65,64,150,71,88,153,165,62,112,100,106,348,	0,17146,24742,25695,27247,27694,28611,29100,29322,29670,32100,33664,34228,35101,35690,36119,36293,37161,38132,38425,39410,39589,39943,
#Partially deleted in new
chr12	48105872	48146104	chr12:48105872-48146104	1	+	48107373	48145708	0	25	265,91,123,93,74,78,190,166,45,109,96,93,126,65,64,150,71,88,153,165,62,112,100,106,541,	0,1492,2199,16894,24490,25443,26995,27442,28359,28848,29070,29418,31848,33412,33976,34849,35438,35867,36041,36909,37880,38173,39158,39337,39691,
#Partially deleted in new
chr12	48105910	48145917	chr12:48105910-48145917	1	+	48106046	48145708	789624	21	227,93,74,78,190,166,45,109,96,126,65,64,150,71,88,153,62,112,100,106,354,	0,16856,24452,25405,26957,27404,28321,28810,29032,31810,33374,33938,34811,35400,35829,36003,37842,38135,39120,39299,39653,
#Partially deleted in new
chr12	48105922	48131381	chr12:48105922-48131381	0	+	48106046	48131381	789624	5	215,123,93,74,66,	0,2149,16844,24440,25393,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr12	48106105	48146104	chr12:48106105-48146104	0	+	48107373	48125461	789624	26	32,91,123,96,93,238,74,78,190,166,45,109,441,126,65,64,150,71,88,153,165,62,112,100,106,541,	0,1259,1966,12376,16661,19219,24257,25210,26762,27209,28126,28615,28837,31615,33179,33743,34616,35205,35634,35808,36676,37647,37940,38925,39104,39458,
#Partially deleted in new
chr12	48106106	48122841	chr12:48106106-48122841	0	+	48107373	48122841	789624	5	205,91,123,96,75,	0,1258,1965,12375,16660,
#Partially deleted in new
chr12	48106115	48131342	chr12:48106115-48131342	0	+	48107373	48131342	789624	7	66,91,123,96,93,74,27,	0,1249,1956,12366,16651,24247,25200,
#Partially deleted in new
chr12	48106117	48146079	chr12:48106117-48146079	1	+	48107373	48145708	789624	26	135,91,123,96,93,74,78,190,166,45,109,96,93,126,65,64,150,71,88,153,165,62,112,100,106,516,	0,1247,1954,12364,16649,24245,25198,26750,27197,28114,28603,28825,29173,31603,33167,33731,34604,35193,35622,35796,36664,37635,37928,38913,39092,39446,
#Partially deleted in new
chr12	48106143	48131392	chr12:48106143-48131392	0	+	48107373	48131392	789624	6	168,91,123,93,74,77,	0,1221,1928,16623,24219,25172,
#Partially deleted in new
chr12	48106387	48131368	chr12:48106387-48131368	0	+	48107373	48131368	789624	6	148,91,123,93,74,53,	0,977,1684,16379,23975,24928,
#Partially deleted in new
chr12	48119229	48146404	chr12:48119229-48146404	1	+	48122774	48145708	0	23	177,93,74,78,190,166,45,109,96,93,126,65,64,150,71,88,153,165,62,112,100,106,841,	0,3537,11133,12086,13638,14085,15002,15491,15713,16061,18491,20055,20619,21492,22081,22510,22684,23552,24523,24816,25801,25980,26334,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	48119263	48131383	chr12:48119263-48131383	0	+	48122774	48125461	789624	5	143,93,238,74,68,	0,3503,6061,11099,12052,
#Partially deleted in new
chr12	48119326	48146088	chr12:48119326-48146088	1	+	48122774	48145708	0	23	136,93,74,78,190,166,45,109,96,93,126,65,64,150,71,88,153,165,62,112,100,106,525,	0,3440,11036,11989,13541,13988,14905,15394,15616,15964,18394,19958,20522,21395,21984,22413,22587,23455,24426,24719,25704,25883,26237,
#Partially deleted in new
chr12	48119342	48146104	chr12:48119342-48146104	0	+	48119342	48119342	8553170	22	64,93,74,78,190,166,45,109,441,126,65,64,150,71,88,153,165,62,112,100,106,541,	0,3424,11020,11973,13525,13972,14889,15378,15600,18378,19942,20506,21379,21968,22397,22571,23439,24410,24703,25688,25867,26221,
#Partially deleted in new
chr12	48119342	48132090	chr12:48119342-48132090	1	+	48122774	48132090	789624	5	64,93,74,78,72,	0,3424,11020,11973,12676,
#Partially deleted in new
chr12	48119347	48131719	chr12:48119347-48131719	0	+	48119347	48119347	8553170	4	59,93,74,404,	0,3419,11015,11968,
#Partially deleted in new
chr12	48119350	48137815	chr12:48119350-48137815	0	+	48122774	48134777	789624	7	56,93,38,109,96,93,95,	0,3416,14888,15370,15592,15940,18370,
#Partially deleted in new
chr12	48119351	48133320	chr12:48119351-48133320	0	+	48122774	48132090	789624	7	55,93,74,78,193,190,6,	0,3415,11011,11964,12667,13516,13963,
#Partially deleted in new
chr12	48119351	48131920	chr12:48119351-48131920	0	+	48119351	48119351	8553170	5	55,93,74,78,242,	0,3415,11011,11964,12327,
#Partially deleted in new
chr12	48119390	48134829	chr12:48119390-48134829	0	+	48122774	48134829	789624	6	16,93,74,78,190,41,	0,3376,10972,11925,13477,15398,
#Partially deleted in new
chr12	48119786	48146104	chr12:48119786-48146104	1	+	48122774	48145708	0	22	143,93,74,78,190,166,45,109,96,126,65,64,150,71,88,153,165,62,112,100,106,541,	0,2980,10576,11529,13081,13528,14445,14934,15156,17934,19498,20062,20935,21524,21953,22127,22995,23966,24259,25244,25423,25777,
#Partially deleted in new
chr12	48122573	48133370	chr12:48122573-48133370	0	+	48122774	48133370	789624	6	80,93,74,78,190,56,	0,193,7789,8742,10294,10741,
#Partially deleted in new
chr12	48122646	48146404	chr12:48122646-48146404	1	+	48122774	48145708	0	23	31,93,74,78,190,166,45,109,96,93,126,65,64,150,71,88,153,165,62,112,100,106,841,	0,120,7716,8669,10221,10668,11585,12074,12296,12644,15074,16638,17202,18075,18664,19093,19267,20135,21106,21399,22384,22563,22917,
#Partially deleted in new
chr12	48122646	48146104	chr12:48122646-48146104	1	+	48122774	48145708	0	22	213,74,78,190,166,45,109,96,93,126,65,64,150,71,88,153,165,62,112,100,106,541,	0,7716,8669,10221,10668,11585,12074,12296,12644,15074,16638,17202,18075,18664,19093,19267,20135,21106,21399,22384,22563,22917,
#Partially deleted in new
chr12	48122719	48142813	chr12:48122719-48142813	0	+	48122774	48142813	789624	6	140,101,71,88,153,32,	0,18051,18591,19020,19194,20062,
#Deleted in new
chr12	48132796	48132867	chr12:48132796-48132867	3	+	48132796	48132796	5263520	1	71,	0,
#Partially deleted in new
chr12	48137356	48141316	chr12:48137356-48141316	0	+	48137356	48137356	8553170	5	490,65,64,150,6,	0,1928,2492,3365,3954,
#Partially deleted in new
chr12	48137790	48142866	chr12:48137790-48142866	0	+	48137790	48139353	789624	8	56,220,64,150,71,88,153,85,	0,1494,2058,2931,3520,3949,4123,4991,
#Partially deleted in new
chr12	48141337	48144073	chr12:48141337-48144073	0	+	48141337	48141337	8553170	5	44,327,165,62,28,	0,402,1444,2415,2708,
#Partially deleted in new
chr12	48141671	48142897	chr12:48141671-48142897	0	+	48141671	48141671	8553170	3	156,153,116,	0,242,1110,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	48141704	48142378	chr12:48141704-48142378	0	+	48141704	48141704	8553170	2	123,465,	0,209,
#Partially deleted in new
chr12	48141972	48145051	chr12:48141972-48145051	0	+	48141972	48145051	789624	4	94,62,112,21,	0,1780,2073,3058,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	48147787	48157595	chr12:48147787-48157595	3	-	48149365	48153496	789624	4	2211,105,162,137,	0,3413,5580,9671,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	48147788	48157595	chr12:48147788-48157595	1	-	48149365	48153496	789624	4	2210,105,158,137,	0,3412,5579,9670,
#Partially deleted in new
chr12	48149429	48157520	chr12:48149429-48157520	0	-	48149429	48149429	8553170	2	569,62,	0,8029,
#Deleted in new
chr12	48149456	48151386	chr12:48149456-48151386	0	-	48149456	48149456	8553170	2	542,186,	0,1744,
#Partially deleted in new
chr12	48149528	48157590	chr12:48149528-48157590	1	-	48150116	48153496	789624	5	470,54,105,162,132,	0,558,1672,3839,7930,
#Partially deleted in new
chr12	48149608	48157502	chr12:48149608-48157502	1	-	48150116	48153496	789624	4	532,105,158,44,	0,1592,3759,7850,
#Partially deleted in new
chr12	48149791	48157591	chr12:48149791-48157591	1	-	48150116	48153496	789624	5	207,54,105,158,133,	0,295,1409,3576,7667,
#Partially deleted in new
chr12	48149802	48157477	chr12:48149802-48157477	0	-	48151292	48153496	789624	5	196,105,56,162,19,	0,1398,1807,3565,7656,
#Partially deleted in new
chr12	48149838	48157515	chr12:48149838-48157515	1	-	48150116	48153496	789624	5	160,84,105,162,57,	0,248,1362,3529,7620,
#Partially deleted in new
chr12	48149850	48181213	chr12:48149850-48181213	0	-	48149850	48153496	789624	5	148,105,158,287,102,	0,1350,3517,7608,31261,
#Partially deleted in new
chr12	48149860	48157515	chr12:48149860-48157515	0	-	48151593	48153496	789624	5	138,105,101,158,57,	0,1340,1704,3507,7598,
#Partially deleted in new
chr12	48149890	48157517	chr12:48149890-48157517	0	-	48149890	48153496	789624	5	108,105,162,136,59,	0,1310,3477,7231,7568,
#Partially deleted in new
chr12	48149895	48157464	chr12:48149895-48157464	0	-	48149895	48153496	789624	5	103,105,162,136,55,	0,1305,3472,7226,7514,
#Partially deleted in new
chr12	48149919	48157591	chr12:48149919-48157591	0	-	48151593	48153496	789624	5	79,105,101,162,133,	0,1281,1645,3448,7539,
#Partially deleted in new
chr12	48150915	48157569	chr12:48150915-48157569	1	-	48151173	48153496	789624	3	390,158,111,	0,2452,6543,
#Partially deleted in new
chr12	48150917	48157587	chr12:48150917-48157587	1	-	48151173	48153496	789624	3	388,162,129,	0,2450,6541,
#Partially deleted in new
chr12	48151281	48153925	chr12:48151281-48153925	0	-	48151281	48153496	789624	2	24,558,	0,2086,
#Partially deleted in new
chr12	48151593	48157502	chr12:48151593-48157502	1	-	48151593	48153496	789624	3	72,162,44,	0,1774,5865,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	48152816	48153128	chr12:48152816-48153128	3	+	48152816	48152816	8553170	1	312,	0,
#Deleted in new
chr12	48160244	48160878	chr12:48160244-48160878	7	-	48160244	48160244	16724991	1	634,	0,
#Deleted in new
chr12	48168846	48169659	chr12:48168846-48169659	7	-	48168846	48168846	16724991	1	813,	0,
#Partially deleted in new
chr12	48171589	48173353	chr12:48171589-48173353	7	+	48171589	48171589	16724991	3	465,286,293,	0,798,1471,
#Deleted in new
chr12	48183583	48185926	chr12:48183583-48185926	3	+	48184122	48184707	789624	1	2343,	0,
#Deleted in new
chr12	48189348	48191207	chr12:48189348-48191207	3	+	48189348	48189348	8553170	1	1859,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	48198356	48230275	chr12:48198356-48230275	3	+	48198356	48198356	8553170	5	112,104,135,161,2863,	0,6066,23569,27556,29056,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	48198386	48202031	chr12:48198386-48202031	1	+	48198386	48198386	8553170	1	3645,	0,
#Deleted in new
chr12	48202082	48203387	chr12:48202082-48203387	3	-	48202338	48203292	789624	1	1305,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	48231097	48284210	chr12:48231097-48284210	3	-	48231097	48231097	8553170	4	89,208,208,61,	0,2471,47329,53052,
#Partially deleted in new
chr12	48327941	48328472	chr12:48327941-48328472	3	-	48327941	48327941	8553170	1	531,	0,
#Partially deleted in new
chr12	48328979	48330279	chr12:48328979-48330279	3	+	48329291	48330059	789624	1	1300,	0,
#Partially deleted in new
chr12	48333754	48333901	chr12:48333754-48333901	7	-	48333754	48333754	16724991	1	147,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	48337179	48350771	chr12:48337179-48350771	1	-	48342972	48350062	789624	6	6548,114,130,92,209,726,	0,7419,8165,10072,10727,12866,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	48340007	48350891	chr12:48340007-48350891	1	-	48342972	48350062	789624	7	3720,114,130,92,209,173,106,	0,4591,5337,7244,7899,10038,10778,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	48342420	48351238	chr12:48342420-48351238	1	-	48342972	48348090	789624	5	1307,114,195,209,31,	0,2178,4728,5486,8787,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	48342555	48350891	chr12:48342555-48350891	3	-	48342972	48348090	789624	6	1172,114,130,92,209,106,	0,2043,2789,4696,5351,8230,
#Partially deleted in new
chr12	48343460	48344773	chr12:48343460-48344773	0	-	48343460	48343460	8553170	2	267,175,	0,1138,
#Partially deleted in new
chr12	48344420	48345367	chr12:48344420-48345367	0	-	48344581	48345367	789624	2	292,23,	0,924,
#Partially deleted in new
chr12	48344650	48350804	chr12:48344650-48350804	0	-	48344650	48348090	789624	3	62,209,19,	0,3256,6135,
#Partially deleted in new
chr12	48345382	48350794	chr12:48345382-48350794	0	-	48345382	48350062	789624	5	92,92,209,173,9,	0,1869,2524,4663,5403,
#Partially deleted in new
chr12	48345427	48351414	chr12:48345427-48351414	0	-	48345427	48348090	789624	4	47,92,209,207,	0,1824,2479,5780,
#Partially deleted in new
chr12	48347296	48350418	chr12:48347296-48350418	0	-	48347296	48348090	789624	3	47,209,300,	0,610,2822,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	48350944	48442411	chr12:48350944-48442411	3	+	48350944	48350944	8553170	4	38,59,140,325,	0,735,6508,91142,
#Partially deleted in new
chr12	48355791	48356614	chr12:48355791-48356614	7	-	48355791	48355791	16724991	1	823,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	48360919	48361377	chr12:48360919-48361377	3	+	48360919	48360919	8553170	1	458,	0,
#Partially deleted in new
chr12	48385416	48386265	chr12:48385416-48386265	7	-	48385416	48385416	16724991	1	849,	0,
#Partially deleted in new
chr12	48394509	48395392	chr12:48394509-48395392	7	-	48394509	48394509	16724991	1	883,	0,
#Deleted in new
chr12	48417149	48417337	chr12:48417149-48417337	7	-	48417149	48417149	16724991	1	188,	0,
#Deleted in new
chr12	48442029	48442947	chr12:48442029-48442947	7	-	48442029	48442029	16724991	1	918,	0,
#Deleted in new
chr12	48472664	48473624	chr12:48472664-48473624	3	+	48472664	48473060	789624	1	960,	0,
#Partially deleted in new
chr12	48482497	48496384	chr12:48482497-48496384	3	+	48483296	48494939	789624	9	79,122,31,39,33,25,49,182,204,	0,742,3680,4190,6426,8314,10449,12300,13683,
#Partially deleted in new
chr12	48483260	48496341	chr12:48483260-48496341	0	+	48483296	48489233	789624	9	101,31,39,33,199,25,49,182,161,	0,2917,3427,5663,5835,7551,9686,11537,12920,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	48483286	48500961	chr12:48483286-48500961	3	-	48483286	48483286	8553170	3	234,214,140,	0,3181,17535,
#Deleted in new
chr12	48486707	48488500	chr12:48486707-48488500	0	+	48486707	48486707	8553170	2	19,674,	0,1119,
#Deleted in new
chr12	48487945	48488408	chr12:48487945-48488408	7	+	48487945	48487945	16724991	1	463,	0,
#Partially deleted in new
chr12	48490811	48496386	chr12:48490811-48496386	0	+	48490811	48494939	789624	5	25,49,182,44,206,	0,2135,3986,4740,5369,
#Partially deleted in new
chr12	48492893	48496386	chr12:48492893-48496386	0	+	48492893	48492893	8553170	3	102,182,206,	0,1904,3287,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	48507353	48529897	chr12:48507353-48529897	7	+	48507353	48507353	16724991	2	183,2026,	0,20518,
#Partially deleted in new
chr12	48525631	48528103	chr12:48525631-48528103	3	+	48525631	48528103	789624	2	888,192,	0,2280,
#Partially deleted in new
chr12	48525631	48526570	chr12:48525631-48526570	1	+	48525631	48526570	789624	1	939,	0,
#Deleted in new
chr12	48528250	48528676	chr12:48528250-48528676	5	+	48528250	48528250	16724991	1	426,	0,
#Partially deleted in new
chr12	48559881	48562956	chr12:48559881-48562956	3	+	48559881	48562956	789624	2	773,163,	0,2912,
#Partially deleted in new
chr12	48567683	48570046	chr12:48567683-48570046	3	-	48567956	48570020	0	4	334,76,159,159,	0,833,1398,2204,
#Partially deleted in new
chr12	48567687	48570066	chr12:48567687-48570066	1	-	48568512	48570020	789624	3	905,159,179,	0,1394,2200,
#Deleted in new
chr12	48627878	48628836	chr12:48627878-48628836	7	+	48627878	48627878	16724991	1	958,	0,
#Partially deleted in new
chr12	48653400	48679693	chr12:48653400-48679693	0	-	48671924	48679693	789624	7	775,120,152,97,167,164,39,	0,1540,7067,14292,15705,18398,26254,
#Partially deleted in new
chr12	48653401	48682211	chr12:48653401-48682211	0	-	48671924	48681632	0	9	774,120,95,97,167,164,179,260,25,	0,1539,9158,14291,15704,18397,26253,27980,28785,
#Partially deleted in new
chr12	48653401	48682225	chr12:48653401-48682225	1	-	48654043	48682181	789624	9	774,120,254,97,167,164,115,179,844,	0,1539,6964,14291,15704,18397,25634,26253,27980,
#Partially deleted in new
chr12	48653415	48682225	chr12:48653415-48682225	3	-	48654043	48681632	0	10	760,120,254,97,167,164,115,179,260,39,	0,1525,6950,14277,15690,18383,25620,26239,27966,28771,
#Partially deleted in new
chr12	48653709	48662592	chr12:48653709-48662592	0	-	48653709	48653709	8553170	5	466,120,254,49,33,	0,1231,6656,7485,8850,
#Partially deleted in new
chr12	48653833	48669225	chr12:48653833-48669225	0	-	48654043	48669225	789624	5	342,120,152,97,120,	0,1107,6634,13859,15272,
#Partially deleted in new
chr12	48653868	48681610	chr12:48653868-48681610	0	-	48662583	48681610	789624	10	307,120,152,95,97,167,164,115,179,229,	0,1072,6599,8691,13824,15237,17930,25167,25786,27513,
#Partially deleted in new
chr12	48653888	48682158	chr12:48653888-48682158	1	-	48654043	48681632	789624	10	287,108,152,97,167,164,115,179,260,301,	0,1064,6579,13804,15217,17910,25147,25766,27493,27969,
#Deleted in new
chr12	48654381	48654518	chr12:48654381-48654518	3	-	48654381	48654381	5263520	1	137,	0,
#Deleted in new
chr12	48654443	48654530	chr12:48654443-48654530	3	-	48654443	48654443	5263520	1	87,	0,
#Deleted in new
chr12	48656647	48656782	chr12:48656647-48656782	3	-	48656647	48656647	789624	1	135,	0,
#Deleted in new
chr12	48667456	48667593	chr12:48667456-48667593	3	-	48667456	48667456	789624	1	137,	0,
#Partially deleted in new
chr12	48671798	48681416	chr12:48671798-48681416	0	-	48679227	48681416	789624	4	164,203,179,35,	0,7237,7856,9583,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	48671857	48680058	chr12:48671857-48680058	0	-	48671857	48671857	8553170	2	105,404,	0,7797,
#Partially deleted in new
chr12	48671918	48682238	chr12:48671918-48682238	0	-	48671918	48681632	789624	5	44,115,179,71,52,	0,7117,7736,9652,10268,
#Partially deleted in new
chr12	48679760	48682238	chr12:48679760-48682238	0	-	48679760	48681632	789624	4	73,260,208,52,	0,1621,2097,2426,
#Deleted in new
chr12	48681223	48682236	chr12:48681223-48682236	0	-	48681223	48681223	8553170	2	418,50,	0,963,
#Deleted in new
chr12	48681423	48682217	chr12:48681423-48682217	0	-	48681423	48681632	789624	3	218,94,31,	0,548,763,
#Partially deleted in new
chr12	48688457	48716998	chr12:48688457-48716998	1	-	48695816	48716675	0	8	5979,71,46,63,61,129,82,484,	0,7301,9680,11320,12555,17310,25985,28057,
#Partially deleted in new
chr12	48688463	48716898	chr12:48688463-48716898	3	-	48693032	48716675	0	9	5973,71,164,46,63,61,129,82,384,	0,7295,7535,9674,11314,12549,17304,25979,28051,
#Partially deleted in new
chr12	48693032	48716675	chr12:48693032-48716675	0	-	48695816	48716675	0	8	1404,71,46,63,61,129,82,161,	0,2726,5105,6745,7980,12735,21410,23482,
#Partially deleted in new
chr12	48693929	48695977	chr12:48693929-48695977	0	-	48693929	48693929	8553170	2	507,219,	0,1829,
#Partially deleted in new
chr12	48697952	48716719	chr12:48697952-48716719	1	-	48697952	48716675	789624	7	10,46,63,61,129,82,205,	0,185,1825,3060,7815,16490,18562,
#Partially deleted in new
chr12	48705623	48714520	chr12:48705623-48714520	0	-	48705623	48705623	8553170	2	273,78,	0,8819,
#Partially deleted in new
chr12	48727434	48765786	chr12:48727434-48765786	3	+	48727480	48765655	789624	4	125,123,145,180,	0,31774,37416,38172,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	48727456	48765785	chr12:48727456-48765785	0	+	48727480	48736149	789624	5	103,85,123,145,179,	0,8631,31752,37394,38150,
#Partially deleted in new
chr12	48766193	48774496	chr12:48766193-48774496	0	-	48766193	48766193	8553170	7	2523,125,1208,130,36,179,557,	0,2743,4572,6101,6314,7275,7746,
#Deleted in new
chr12	48766193	48767323	chr12:48766193-48767323	3	+	48766193	48766193	8553170	2	271,442,	0,688,
#Partially deleted in new
chr12	48766197	48783441	chr12:48766197-48783441	1	-	48768590	48783434	789624	20	2519,125,205,264,130,36,179,117,88,98,148,26,129,142,159,128,112,122,150,871,	0,2739,4568,5512,6097,6310,7271,8204,8493,8759,9105,9475,9765,10011,10230,10906,11212,11417,11910,16373,
#Partially deleted in new
chr12	48766197	48789037	chr12:48766197-48789037	1	-	48768590	48783434	789624	21	2519,125,205,264,130,36,179,117,88,98,148,26,129,142,159,128,112,122,150,868,132,	0,2739,4568,5512,6097,6310,7271,8204,8493,8759,9105,9475,9765,10011,10230,10906,11212,11417,11910,16373,22708,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr12	48766328	48784129	chr12:48766328-48784129	3	-	48768590	48783434	789624	21	2388,125,205,264,130,36,179,159,117,88,98,148,26,129,142,159,128,112,122,150,1559,	0,2608,4437,5381,5966,6179,7140,7611,8073,8362,8628,8974,9344,9634,9880,10099,10775,11081,11286,11779,16242,
#Partially deleted in new
chr12	48771256	48774754	chr12:48771256-48774754	0	-	48771256	48771256	8553170	6	717,130,36,630,117,64,	0,1038,1251,2212,3145,3434,
#Partially deleted in new
chr12	48771742	48774024	chr12:48771742-48774024	0	-	48771742	48771742	8553170	5	231,45,36,179,85,	0,552,765,1726,2197,
#Partially deleted in new
chr12	48771974	48772037	chr12:48771974-48772037	3	-	48771974	48771974	5263520	1	63,	0,
#Deleted in new
chr12	48773942	48776484	chr12:48773942-48776484	0	-	48773942	48773942	8553170	8	156,105,98,148,26,129,142,57,	0,459,1014,1360,1730,2020,2266,2485,
#Deleted in new
chr12	48776293	48778185	chr12:48776293-48778185	0	-	48776293	48776293	8553170	5	57,159,418,122,78,	0,134,810,1321,1814,
#Deleted in new
chr12	48777671	48778424	chr12:48777671-48778424	0	-	48777671	48778290	789624	2	65,317,	0,436,
#Partially deleted in new
chr12	48789146	48790535	chr12:48789146-48790535	0	+	48789146	48789146	789624	3	81,135,223,	0,838,1166,
#Partially deleted in new
chr12	48789575	48790535	chr12:48789575-48790535	3	+	48789575	48789575	789624	3	115,135,223,	0,409,737,
#Deleted in new
chr12	48800575	48801086	chr12:48800575-48801086	7	-	48800575	48800575	16724991	1	511,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	48809910	48810016	chr12:48809910-48810016	3	+	48809910	48809910	8553170	1	106,	0,
#Partially deleted in new
chr12	48813793	48823984	chr12:48813793-48823984	0	+	48813793	48813793	8553170	3	50,123,304,	0,9550,9887,
#Partially deleted in new
chr12	48814431	48825724	chr12:48814431-48825724	0	+	48814547	48825185	789624	8	122,123,123,116,65,81,59,65,	0,8912,9249,9826,10237,10731,11002,11228,
#Partially deleted in new
chr12	48814450	48828200	chr12:48814450-48828200	1	+	48814547	48827899	789624	13	103,123,123,116,65,20,81,59,110,152,96,150,616,	0,8893,9230,9807,10218,10498,10712,10983,11209,11916,12308,12523,13134,
#Partially deleted in new
chr12	48814479	48825161	chr12:48814479-48825161	0	+	48814479	48814479	8553170	5	74,123,123,116,493,	0,8864,9201,9778,10189,
#Partially deleted in new
chr12	48814892	48828941	chr12:48814892-48828941	0	+	48814892	48814892	8553170	12	836,332,123,123,116,575,59,110,152,96,150,1357,	0,2036,8451,8788,9365,9776,10541,10767,11474,11866,12081,12692,
#Partially deleted in new
chr12	48815586	48828219	chr12:48815586-48828219	1	+	48815686	48827899	789624	13	142,123,123,116,65,20,81,59,110,152,96,150,635,	0,7757,8094,8671,9082,9362,9576,9847,10073,10780,11172,11387,11998,
#Partially deleted in new
chr12	48815590	48825484	chr12:48815590-48825484	0	+	48815686	48824698	789624	6	138,123,123,65,81,51,	0,7753,8090,9078,9572,9843,
#Partially deleted in new
chr12	48815599	48823972	chr12:48815599-48823972	0	+	48815599	48815599	8553170	3	129,123,292,	0,7744,8081,
#Partially deleted in new
chr12	48815601	48824733	chr12:48815601-48824733	0	+	48815601	48815601	8553170	6	127,123,123,123,116,65,	0,1271,7742,8079,8656,9067,
#Deleted in new
chr12	48815611	48817312	chr12:48815611-48817312	0	+	48815611	48815611	8553170	2	117,440,	0,1261,
#Partially deleted in new
chr12	48817865	48825720	chr12:48817865-48825720	0	+	48825198	48825720	789624	9	98,123,123,116,65,20,81,59,61,	0,5478,5815,6392,6803,7083,7297,7568,7794,
#Partially deleted in new
chr12	48818385	48824733	chr12:48818385-48824733	0	+	48818385	48818385	8553170	5	137,123,123,116,65,	0,4958,5295,5872,6283,
#Partially deleted in new
chr12	48818405	48824312	chr12:48818405-48824312	0	+	48818405	48818405	8553170	5	117,131,123,123,55,	0,2152,4938,5275,5852,
#Partially deleted in new
chr12	48818483	48826518	chr12:48818483-48826518	0	+	48825198	48826518	789624	9	75,123,123,116,65,81,59,110,152,	0,4860,5197,5774,6185,6679,6950,7176,7883,
#Partially deleted in new
chr12	48818503	48828336	chr12:48818503-48828336	1	+	48818929	48827899	789624	12	471,123,123,116,65,20,59,110,152,96,150,752,	0,4840,5177,5754,6165,6445,6930,7156,7863,8255,8470,9081,
#Partially deleted in new
chr12	48818730	48828941	chr12:48818730-48828941	3	+	48818929	48827899	789624	13	244,123,123,116,65,20,81,59,110,152,96,150,1357,	0,4613,4950,5527,5938,6218,6432,6703,6929,7636,8028,8243,8854,
#Partially deleted in new
chr12	48818786	48824697	chr12:48818786-48824697	0	+	48818929	48824697	789624	5	188,123,123,113,29,	0,4557,4894,5474,5882,
#Partially deleted in new
chr12	48818792	48823961	chr12:48818792-48823961	0	+	48818792	48818792	8553170	3	182,123,281,	0,4551,4888,
#Partially deleted in new
chr12	48818908	48828941	chr12:48818908-48828941	1	+	48818929	48827899	789624	12	66,123,116,65,20,81,59,110,152,96,150,1357,	0,4435,5349,5760,6040,6254,6525,6751,7458,7850,8065,8676,
#Partially deleted in new
chr12	48818908	48828941	chr12:48818908-48828941	0	+	48818929	48819704	789624	14	66,307,123,123,116,65,20,81,59,110,152,96,150,1357,	0,727,4435,4772,5349,5760,6040,6254,6525,6751,7458,7850,8065,8676,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	48819777	48821489	chr12:48819777-48821489	0	+	48819777	48819777	8553170	1	1712,	0,
#Partially deleted in new
chr12	48823445	48828941	chr12:48823445-48828941	0	+	48823445	48828772	789624	3	21,123,280,	0,235,5216,
#Partially deleted in new
chr12	48823778	48826518	chr12:48823778-48826518	0	+	48823778	48825185	789624	7	25,116,65,81,59,110,274,	0,479,890,1384,1655,1881,2466,
#Partially deleted in new
chr12	48825114	48827868	chr12:48825114-48827868	0	+	48825114	48825114	8553170	7	129,59,110,99,96,150,284,	0,319,545,1305,1644,1859,2470,
#Partially deleted in new
chr12	48829763	48852163	chr12:48829763-48852163	3	-	48830468	48845782	0	17	929,175,109,152,243,178,146,226,144,113,134,139,66,94,111,209,80,	0,1378,2314,2658,3513,4556,6357,6805,7130,7517,7760,8178,10080,10249,14176,15810,22320,
#Partially deleted in new
chr12	48830056	48839855	chr12:48830056-48839855	0	-	48830145	48839855	789624	6	459,12,113,134,139,12,	0,6969,7224,7467,7885,9787,
#Deleted in new
chr12	48831213	48832915	chr12:48831213-48832915	0	-	48831213	48831213	8553170	3	103,109,494,	0,864,1208,
#Partially deleted in new
chr12	48831828	48833345	chr12:48831828-48833345	0	-	48831828	48831828	8553170	3	358,152,69,	0,593,1448,
#Deleted in new
chr12	48832002	48832820	chr12:48832002-48832820	0	-	48832002	48832002	8553170	2	184,370,	0,448,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	48832421	48836680	chr12:48832421-48836680	0	-	48834393	48836680	789624	6	152,243,178,95,146,112,	0,855,1898,2698,3699,4147,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	48832507	48834760	chr12:48832507-48834760	0	-	48832507	48832507	8553170	3	66,243,441,	0,769,1812,
#Partially deleted in new
chr12	48832522	48833561	chr12:48832522-48833561	0	-	48832522	48832522	8553170	2	51,285,	0,754,
#Partially deleted in new
chr12	48834457	48852141	chr12:48834457-48852141	0	-	48840144	48845782	0	9	40,146,469,139,66,139,111,209,58,	0,1663,2111,3484,5386,5555,9482,11116,17626,
#Deleted in new
chr12	48836175	48838061	chr12:48836175-48838061	0	-	48836175	48836175	8553170	5	91,226,144,377,120,	0,393,718,1105,1766,
#Deleted in new
chr12	48836641	48837332	chr12:48836641-48837332	0	-	48836641	48836641	8553170	2	153,439,	0,252,
#Deleted in new
chr12	48836771	48837700	chr12:48836771-48837700	0	-	48836771	48836771	8553170	3	23,144,420,	0,122,509,
#Partially deleted in new
chr12	48837291	48852141	chr12:48837291-48852141	0	-	48837291	48837291	8553170	7	102,139,66,94,111,209,58,	0,650,2552,2721,6648,8282,14792,
#Partially deleted in new
chr12	48837532	48852138	chr12:48837532-48852138	0	-	48837532	48837532	8553170	6	548,66,94,111,209,55,	0,2311,2480,6407,8041,14551,
#Partially deleted in new
chr12	48840128	48852842	chr12:48840128-48852842	0	-	48840128	48840128	8553170	4	23,111,209,219,	0,3811,5445,12495,
#Partially deleted in new
chr12	48857144	48865898	chr12:48857144-48865898	3	-	48857995	48865767	0	5	1097,135,110,88,251,	0,3852,4864,7638,8503,
#Partially deleted in new
chr12	48857144	48861131	chr12:48857144-48861131	0	-	48857995	48861131	789624	3	170,247,135,	0,850,3852,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	48857146	48859282	chr12:48857146-48859282	0	-	48857146	48857146	8553170	1	2136,	0,
#Partially deleted in new
chr12	48857685	48865870	chr12:48857685-48865870	0	-	48857685	48857685	8553170	4	556,1122,88,223,	0,3311,7097,7962,
#Partially deleted in new
chr12	48858096	48862210	chr12:48858096-48862210	0	-	48858096	48858096	8553170	3	145,135,202,	0,2900,3912,
#Deleted in new
chr12	48861029	48865855	chr12:48861029-48865855	0	-	48865476	48865767	789624	4	102,110,88,493,	0,979,3753,4333,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	48892129	48892228	chr12:48892129-48892228	3	-	48892129	48892129	8553170	1	99,	0,
#Partially deleted in new
chr12	48903417	48903813	chr12:48903417-48903813	7	-	48903417	48903417	16724991	1	396,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	48903502	48957365	chr12:48903502-48957365	3	-	48903659	48941095	789624	5	406,125,111,241,56,	0,36152,36494,37445,53807,
#Partially deleted in new
chr12	48904109	48931840	chr12:48904109-48931840	1	+	48904336	48931477	789624	9	359,168,170,139,198,219,153,250,428,	0,836,10294,12860,14165,14575,16820,17058,27303,
#Partially deleted in new
chr12	48904118	48921417	chr12:48904118-48921417	0	+	48904336	48921417	789624	6	350,168,198,219,153,250,	0,827,14156,14566,16811,17049,
#Partially deleted in new
chr12	48904132	48921570	chr12:48904132-48921570	0	+	48904336	48904982	789624	8	314,150,170,139,198,219,153,403,	0,831,10271,12837,14142,14552,16797,17035,
#Partially deleted in new
chr12	48904148	48921575	chr12:48904148-48921575	3	+	48904336	48921443	789624	8	320,168,170,139,198,219,153,408,	0,797,10255,12821,14126,14536,16781,17019,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	48918143	48920963	chr12:48918143-48920963	0	+	48918143	48918143	8553170	3	329,219,34,	0,541,2786,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	48921517	48926474	chr12:48921517-48926474	0	-	48921517	48921517	8553170	1	4957,	0,
#Partially deleted in new
chr12	48921958	48924967	chr12:48921958-48924967	1	-	48921983	48924233	789624	5	243,71,34,88,194,	0,1823,2264,2602,2815,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	48921958	48925827	chr12:48921958-48925827	3	-	48921983	48925428	789624	6	243,71,34,88,66,528,	0,1823,2264,2602,3087,3341,
#Partially deleted in new
chr12	48921958	48924729	chr12:48921958-48924729	0	-	48921958	48921958	8553170	4	243,71,34,169,	0,1823,2264,2602,
#Partially deleted in new
chr12	48921959	48924615	chr12:48921959-48924615	0	-	48923871	48924615	789624	4	242,193,34,55,	0,1822,2263,2601,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	48921960	48925510	chr12:48921960-48925510	0	-	48921960	48921960	8553170	4	2296,88,66,211,	0,2600,3085,3339,
#Partially deleted in new
chr12	48921962	48939663	chr12:48921962-48939663	3	-	48922179	48939663	789624	3	239,158,9,	0,16988,17692,
#Partially deleted in new
chr12	48921976	48925485	chr12:48921976-48925485	0	-	48924619	48925428	789624	6	225,71,34,88,121,186,	0,1805,2246,2584,3069,3323,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	48922564	48925511	chr12:48922564-48925511	1	-	48922984	48925428	789624	6	581,71,34,88,66,212,	0,1217,1658,1996,2481,2735,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	48923125	48925520	chr12:48923125-48925520	1	-	48923551	48925428	789624	6	479,71,34,88,66,221,	0,656,1097,1435,1920,2174,
#Deleted in new
chr12	48923241	48924788	chr12:48923241-48924788	0	-	48923241	48923241	8553170	3	611,34,228,	0,981,1319,
#Deleted in new
chr12	48923762	48925492	chr12:48923762-48925492	0	-	48924635	48925428	789624	5	90,34,88,77,193,	0,460,798,1283,1537,
#Deleted in new
chr12	48923938	48925156	chr12:48923938-48925156	0	-	48923938	48923938	8553170	3	318,88,111,	0,622,1107,
#Deleted in new
chr12	48924825	48925510	chr12:48924825-48925510	0	-	48924825	48924825	8553170	2	297,211,	0,474,
#Partially deleted in new
chr12	48935722	48957551	chr12:48935722-48957551	3	-	48938946	48941095	789624	5	3386,125,111,241,242,	0,3932,4274,5225,21587,
#Partially deleted in new
chr12	48938420	48957445	chr12:48938420-48957445	0	-	48938420	48938420	8553170	2	427,136,	0,18889,
#Partially deleted in new
chr12	48938553	48957477	chr12:48938553-48957477	1	-	48938946	48941095	789624	4	555,125,241,168,	0,1101,2394,18756,
#Partially deleted in new
chr12	48938924	48957445	chr12:48938924-48957445	1	-	48938946	48941095	789624	6	184,125,111,241,10,136,	0,730,1072,2023,2643,18385,
#Partially deleted in new
chr12	48939731	48957069	chr12:48939731-48957069	0	-	48939731	48941095	789624	4	48,111,241,85,	0,265,1216,17253,
#Partially deleted in new
chr12	48940103	48957378	chr12:48940103-48957378	0	-	48940103	48941095	789624	5	4,241,162,100,69,	0,844,13009,15994,17206,
#Partially deleted in new
chr12	48940974	48956440	chr12:48940974-48956440	0	-	48940974	48941095	789624	2	214,343,	0,15123,
#Partially deleted in new
chr12	48941093	48957205	chr12:48941093-48957205	0	-	48941093	48941093	8553170	3	95,253,221,	0,15004,15891,
#Partially deleted in new
chr12	48941123	48956492	chr12:48941123-48956492	0	-	48941123	48941123	8553170	3	65,66,395,	0,14571,14974,
#Deleted in new
chr12	48956151	48957462	chr12:48956151-48957462	0	-	48956151	48956151	8553170	2	384,153,	0,1158,
#Partially deleted in new
chr12	48965339	48971763	chr12:48965339-48971763	3	-	48966094	48970529	789624	5	1214,374,263,114,309,	0,2606,4749,5116,6115,
#Partially deleted in new
chr12	48965404	48971498	chr12:48965404-48971498	1	-	48966546	48970529	789624	6	1149,61,171,263,114,44,	0,2541,2744,4684,5051,6050,
#Partially deleted in new
chr12	48965555	48971718	chr12:48965555-48971718	1	-	48966546	48970529	789624	6	998,61,117,263,114,264,	0,2390,2647,4533,4900,5899,
#Deleted in new
chr12	48968295	48970756	chr12:48968295-48970756	0	-	48968295	48970529	789624	4	24,35,263,301,	0,814,1793,2160,
#Deleted in new
chr12	48970119	48970889	chr12:48970119-48970889	0	-	48970119	48970529	789624	3	232,114,213,	0,336,557,
#Deleted in new
chr12	48970119	48970652	chr12:48970119-48970652	0	-	48970119	48970119	8553170	2	232,197,	0,336,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	48975542	48975646	chr12:48975542-48975646	3	+	48975542	48975542	8553170	1	104,	0,
#Deleted in new
chr12	48978452	48981640	chr12:48978452-48981640	1	+	48978650	48981640	789624	5	302,254,266,203,253,	0,1015,1971,2699,2935,
#Deleted in new
chr12	48978614	48981676	chr12:48978614-48981676	3	+	48978650	48981640	789624	4	140,254,266,525,	0,853,1809,2537,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	48995148	48999309	chr12:48995148-48999309	3	-	48996739	48999287	789624	2	3518,231,	0,3930,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	48995149	48996334	chr12:48995149-48996334	3	+	48995149	48995149	8553170	2	205,74,	0,1111,
#Partially deleted in new
chr12	48998366	49019235	chr12:48998366-49019235	0	+	48998366	48998366	789624	2	324,1000,	0,19869,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	48998371	49019197	chr12:48998371-49019197	3	+	48998371	48998371	8553170	2	319,1795,	0,19031,
#Deleted in new
chr12	49002273	49003593	chr12:49002273-49003593	0	-	49002813	49003593	789624	4	597,42,147,36,	0,691,870,1284,
#Partially deleted in new
chr12	49002277	49018779	chr12:49002277-49018779	1	-	49002898	49018740	0	12	729,147,38,166,127,55,46,86,82,110,49,48,	0,866,1280,1479,2229,2686,2842,3028,3184,3465,10784,16454,
#Partially deleted in new
chr12	49002277	49018764	chr12:49002277-49018764	1	-	49002898	49013076	789624	11	729,147,38,166,127,55,46,59,82,49,33,	0,866,1280,1479,2229,2686,2842,3028,3184,10784,16454,
#Partially deleted in new
chr12	49002280	49018825	chr12:49002280-49018825	3	-	49002898	49018740	0	12	726,147,38,166,127,55,46,59,82,110,49,94,	0,863,1277,1476,2226,2683,2839,3025,3181,3462,10781,16451,
#Partially deleted in new
chr12	49002311	49018787	chr12:49002311-49018787	0	-	49005511	49018740	789624	12	695,147,38,166,127,55,46,59,131,110,49,56,	0,832,1246,1445,2195,2652,2808,2994,3150,3431,10750,16420,
#Partially deleted in new
chr12	49002613	49018748	chr12:49002613-49018748	1	-	49002898	49005814	0	12	393,147,38,166,127,55,46,59,82,110,49,225,	0,530,944,1143,1893,2350,2506,2692,2848,3129,10448,15910,
#Partially deleted in new
chr12	49002639	49005835	chr12:49002639-49005835	0	-	49002898	49005835	789624	8	367,147,166,55,46,59,82,93,	0,504,1117,2324,2480,2666,2822,3103,
#Partially deleted in new
chr12	49002968	49018777	chr12:49002968-49018777	0	-	49002968	49013076	789624	9	38,147,166,55,46,59,82,49,46,	0,175,788,1995,2151,2337,2493,10093,15763,
#Partially deleted in new
chr12	49003756	49018775	chr12:49003756-49018775	0	-	49003756	49003756	8553170	7	166,127,55,46,238,49,44,	0,750,1207,1363,1549,9305,14975,
#Partially deleted in new
chr12	49003761	49005829	chr12:49003761-49005829	0	-	49003761	49003761	8553170	6	161,127,55,46,59,368,	0,745,1202,1358,1544,1700,
#Partially deleted in new
chr12	49003771	49018750	chr12:49003771-49018750	0	-	49003771	49005362	789624	9	151,127,55,46,59,82,75,49,19,	0,735,1192,1348,1534,1690,1896,9290,14960,
#Partially deleted in new
chr12	49003809	49018764	chr12:49003809-49018764	0	-	49003809	49003809	8553170	8	113,512,46,59,82,110,49,33,	0,697,1310,1496,1652,1933,9252,14922,
#Partially deleted in new
chr12	49003879	49018743	chr12:49003879-49018743	0	-	49003879	49005814	789624	9	43,127,55,46,59,82,139,49,12,	0,627,1084,1240,1426,1582,1863,9182,14852,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	49004223	49018764	chr12:49004223-49018764	0	-	49004223	49004223	8553170	7	795,46,59,82,110,49,33,	0,896,1082,1238,1519,8838,14508,
#Partially deleted in new
chr12	49004571	49018415	chr12:49004571-49018415	0	-	49004571	49005814	789624	9	62,55,46,59,82,110,49,233,82,	0,392,548,734,890,1171,8490,12035,13762,
#Partially deleted in new
chr12	49005310	49018807	chr12:49005310-49018807	0	-	49005310	49005814	789624	6	54,82,110,49,233,76,	0,151,432,7751,11296,13421,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	49005794	49018757	chr12:49005794-49018757	0	-	49005794	49017180	789624	4	58,49,394,26,	0,7267,11362,12937,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	49012612	49018786	chr12:49012612-49018786	0	-	49012612	49012612	8553170	2	498,55,	0,6119,
#Partially deleted in new
chr12	49018974	49055324	chr12:49018974-49055324	3	-	49021779	49055324	0	54	2898,109,74,286,131,137,1141,128,133,131,176,76,160,168,141,2790,233,67,85,124,1865,137,183,1812,51,74,242,85,138,111,66,148,131,105,120,222,48,110,165,182,105,111,114,1109,1539,146,158,115,166,163,110,224,127,49,	0,3068,3305,3615,5603,5835,7207,8828,9034,9853,10086,10426,11305,11626,11918,12200,15092,15435,15607,15837,18150,20247,20460,20749,22680,22942,23114,23586,23766,24101,24388,24660,24893,25225,25428,25769,26945,27090,27285,27634,28990,29684,30130,30707,31911,33589,33940,34232,34501,35003,35332,35553,35925,36301,
#Deleted in new
chr12	49030279	49031404	chr12:49030279-49031404	0	-	49030279	49030279	8553170	3	489,141,230,	0,613,895,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	49035574	49037296	chr12:49035574-49037296	0	-	49035574	49035574	8553170	2	443,172,	0,1550,
#Deleted in new
chr12	49038467	49039299	chr12:49038467-49039299	0	-	49038467	49038467	8553170	2	452,78,	0,754,
#Deleted in new
chr12	49043077	49043698	chr12:49043077-49043698	0	-	49043077	49043077	8553170	2	109,336,	0,285,
#Deleted in new
chr12	49043634	49044522	chr12:49043634-49044522	0	-	49043634	49044522	8553170	4	148,131,114,120,	0,233,556,768,
#Deleted in new
chr12	49054379	49059774	chr12:49054379-49059774	0	-	49054379	49055324	789624	5	37,224,127,86,162,	0,148,520,896,5233,
#Partially deleted in new
chr12	49064684	49070025	chr12:49064684-49070025	3	-	49065102	49069785	0	8	508,82,48,57,83,68,72,292,	0,665,1546,1791,1934,2283,4350,5049,
#Partially deleted in new
chr12	49064685	49069947	chr12:49064685-49069947	0	-	49066696	49069785	789624	7	507,82,48,57,83,72,214,	0,664,1545,1790,1933,4349,5048,
#Partially deleted in new
chr12	49064701	49070025	chr12:49064701-49070025	0	-	49067020	49069785	0	8	491,82,48,57,83,68,140,292,	0,648,1529,1774,1917,2266,4333,5032,
#Partially deleted in new
chr12	49066491	49069837	chr12:49066491-49069837	0	-	49066491	49069785	789624	5	41,83,80,72,104,	0,127,464,2543,3242,
#Partially deleted in new
chr12	49075038	49075802	chr12:49075038-49075802	7	+	49075038	49075038	16724991	2	36,241,	0,523,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	49086655	49094819	chr12:49086655-49094819	3	-	49089858	49094512	789624	3	3829,262,610,	0,4472,7554,
#Partially deleted in new
chr12	49089420	49094801	chr12:49089420-49094801	1	-	49089858	49094512	0	3	1064,262,592,	0,1707,4789,
#Partially deleted in new
chr12	49090207	49093201	chr12:49090207-49093201	3	+	49090207	49090207	8553170	3	268,77,372,	0,2058,2622,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	49092207	49093312	chr12:49092207-49093312	0	+	49092207	49092207	8553170	3	135,76,64,	0,622,1041,
#Partially deleted in new
chr12	49096550	49110898	chr12:49096550-49110898	3	-	49097671	49110555	789624	17	1189,162,67,91,74,78,77,84,73,65,69,127,104,140,34,85,415,	0,1393,3837,4005,4699,4921,5569,5742,5917,6336,6540,7136,7897,8195,9373,10410,13933,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr12	49097135	49110681	chr12:49097135-49110681	0	-	49106678	49110555	789624	18	604,162,67,91,74,78,77,84,73,65,69,127,104,140,34,202,85,198,	0,808,3252,3420,4114,4336,4984,5157,5332,5751,5955,6551,7312,7610,8788,9409,9825,13348,
#Partially deleted in new
chr12	49097136	49104379	chr12:49097136-49104379	0	-	49097136	49097136	8553170	11	603,162,67,91,99,77,84,73,65,69,693,	0,807,3251,3419,4314,4983,5156,5331,5750,5954,6550,
#Partially deleted in new
chr12	49097141	49110850	chr12:49097141-49110850	1	-	49097671	49110555	789624	17	598,162,67,91,14,78,77,84,73,65,69,127,104,140,34,85,367,	0,802,3246,3414,4108,4330,4978,5151,5326,5745,5949,6545,7306,7604,8782,9819,13342,
#Partially deleted in new
chr12	49097144	49101549	chr12:49097144-49101549	0	-	49097671	49101549	789624	5	595,67,91,74,78,	0,3243,3411,4105,4327,
#Partially deleted in new
chr12	49097156	49102196	chr12:49097156-49102196	0	-	49097671	49102196	789624	8	105,174,162,67,91,14,78,77,	0,409,787,3231,3399,4093,4315,4963,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	49097157	49110667	chr12:49097157-49110667	0	-	49097157	49097157	8553170	15	582,162,936,78,77,84,73,65,69,127,104,140,34,85,184,	0,786,3230,4314,4962,5135,5310,5729,5933,6529,7290,7588,8766,9803,13326,
#Partially deleted in new
chr12	49097326	49101658	chr12:49097326-49101658	0	-	49097326	49097326	8553170	5	413,162,67,195,187,	0,617,3061,3802,4145,
#Partially deleted in new
chr12	49097673	49100732	chr12:49097673-49100732	0	-	49097673	49097673	8553170	4	66,162,67,177,	0,270,2714,2882,
#Partially deleted in new
chr12	49097699	49110877	chr12:49097699-49110877	0	-	49109773	49110555	789624	17	40,162,67,91,99,77,84,73,65,69,127,104,140,34,85,155,394,	0,244,2688,2856,3751,4420,4593,4768,5187,5391,5987,6748,7046,8224,9261,12027,12784,
#Partially deleted in new
chr12	49098001	49102343	chr12:49098001-49102343	0	-	49098001	49098001	8553170	6	104,67,91,14,78,224,	0,2386,2554,3248,3470,4118,
#Partially deleted in new
chr12	49100599	49102176	chr12:49100599-49102176	0	-	49100599	49102176	789624	4	47,95,78,57,	0,569,872,1520,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	49100758	49101501	chr12:49100758-49101501	0	-	49100758	49100758	8553170	2	455,30,	0,713,
#Deleted in new
chr12	49101102	49103120	chr12:49101102-49103120	0	-	49101102	49101102	8553170	7	161,78,77,84,73,65,30,	0,369,1017,1190,1365,1784,1988,
#Deleted in new
chr12	49101919	49103778	chr12:49101919-49103778	0	-	49101919	49101919	8553170	5	457,73,65,69,92,	0,548,967,1171,1767,
#Partially deleted in new
chr12	49102352	49110850	chr12:49102352-49110850	0	-	49103779	49110555	789624	9	24,73,65,69,127,104,167,85,367,	0,115,534,738,1334,2095,2366,4608,8131,
#Partially deleted in new
chr12	49102475	49110675	chr12:49102475-49110675	0	-	49102475	49110555	789624	6	65,65,140,34,85,192,	0,411,2270,3448,4485,8008,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	49103080	49107011	chr12:49103080-49107011	0	-	49106678	49107011	789624	7	79,127,104,140,34,236,51,	0,606,1367,1665,2843,3430,3880,
#Deleted in new
chr12	49103102	49106080	chr12:49103102-49106080	0	-	49103102	49103102	8553170	5	57,127,104,140,157,	0,584,1345,1643,2821,
#Partially deleted in new
chr12	49103686	49110871	chr12:49103686-49110871	0	-	49103686	49103686	8553170	3	127,34,388,	0,2237,6797,
#Partially deleted in new
chr12	49103700	49110693	chr12:49103700-49110693	0	-	49103700	49103700	8553170	5	113,140,34,85,210,	0,1045,2223,3260,6783,
#Partially deleted in new
chr12	49104469	49110845	chr12:49104469-49110845	0	-	49104469	49110555	789624	3	82,85,362,	0,2491,6014,
#Partially deleted in new
chr12	49104473	49110205	chr12:49104473-49110205	0	-	49104473	49110094	789624	5	78,140,34,85,198,	0,272,1450,2487,5534,
#Deleted in new
chr12	49104493	49105232	chr12:49104493-49105232	0	-	49104493	49104493	8553170	2	58,487,	0,252,
#Partially deleted in new
chr12	49104498	49110850	chr12:49104498-49110850	0	-	49104807	49110555	789624	3	53,140,367,	0,247,5985,
#Partially deleted in new
chr12	49104502	49110886	chr12:49104502-49110886	0	-	49104502	49110555	789624	6	49,140,34,85,185,74,	0,243,1421,2458,5981,6310,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	49104750	49110677	chr12:49104750-49110677	0	-	49106678	49110555	789624	5	135,34,93,85,194,	0,1173,1903,2210,5733,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	49106422	49110884	chr12:49106422-49110884	0	-	49106422	49106422	8553170	4	324,85,155,401,	0,538,3304,4061,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	49106588	49110900	chr12:49106588-49110900	0	-	49106588	49106588	8553170	2	457,417,	0,3895,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	49106690	49110847	chr12:49106690-49110847	0	-	49106690	49106690	8553170	3	56,102,364,	0,270,3793,
#Partially deleted in new
chr12	49127781	49131395	chr12:49127781-49131395	3	-	49127957	49131300	0	4	1157,149,223,98,	0,1460,1718,3516,
#Deleted in new
chr12	49127781	49128879	chr12:49127781-49128879	1	+	49127781	49127781	8553170	2	431,244,	0,854,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	49127785	49131395	chr12:49127785-49131395	0	-	49127785	49127785	8553170	3	1153,149,1896,	0,1456,1714,
#Deleted in new
chr12	49127785	49128708	chr12:49127785-49128708	1	+	49127785	49127785	8553170	2	422,82,	0,841,
#Partially deleted in new
chr12	49127817	49131395	chr12:49127817-49131395	0	-	49130255	49131300	789624	5	1121,149,223,284,98,	0,1424,1682,2301,3480,
#Partially deleted in new
chr12	49128010	49131362	chr12:49128010-49131362	1	+	49128010	49128010	8553170	2	854,43,	0,3309,
#Partially deleted in new
chr12	49128453	49131395	chr12:49128453-49131395	0	-	49128453	49131300	789624	5	332,33,149,223,98,	0,452,788,1046,2844,
#Partially deleted in new
chr12	49128980	49131395	chr12:49128980-49131395	0	-	49128980	49128980	8553170	2	742,98,	0,2317,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	49129267	49130113	chr12:49129267-49130113	0	-	49129267	49129620	789624	3	123,223,219,	0,232,627,
#Partially deleted in new
chr12	49129285	49131397	chr12:49129285-49131397	0	-	49129285	49129620	789624	4	105,223,156,100,	0,214,833,2012,
#Partially deleted in new
chr12	49129363	49131395	chr12:49129363-49131395	0	-	49129363	49129620	789624	4	27,223,226,98,	0,136,755,1934,
#Partially deleted in new
chr12	49131170	49147869	chr12:49131170-49147869	3	+	49131170	49131170	8553170	2	211,207,	0,16492,
#Partially deleted in new
chr12	49131709	49147865	chr12:49131709-49147865	0	+	49131709	49131709	8553170	2	116,203,	0,15953,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	49132852	49132947	chr12:49132852-49132947	3	-	49132852	49132852	8553170	1	95,	0,
#Deleted in new
chr12	49184795	49189324	chr12:49184795-49189324	3	-	49185009	49188979	0	4	1195,149,223,348,	0,1514,1815,4181,
#Deleted in new
chr12	49184958	49188899	chr12:49184958-49188899	1	-	49185009	49188419	0	4	1032,149,223,483,	0,1351,1652,3458,
#Deleted in new
chr12	49185009	49186864	chr12:49185009-49186864	1	-	49185009	49186731	0	3	981,149,254,	0,1300,1601,
#Deleted in new
chr12	49185601	49189066	chr12:49185601-49189066	0	-	49185601	49186731	789624	5	389,149,223,95,90,	0,708,1009,1388,3375,
#Deleted in new
chr12	49185620	49189066	chr12:49185620-49189066	1	-	49185821	49188979	789624	3	370,524,90,	0,689,3356,
#Deleted in new
chr12	49185924	49189078	chr12:49185924-49189078	0	-	49185924	49186731	789624	4	66,149,223,190,	0,385,686,2964,
#Deleted in new
chr12	49186015	49188983	chr12:49186015-49188983	0	-	49186015	49186015	8553170	3	443,223,7,	0,595,2961,
#Deleted in new
chr12	49186162	49189001	chr12:49186162-49189001	0	-	49186162	49186162	8553170	2	671,25,	0,2814,
#Deleted in new
chr12	49186652	49187458	chr12:49186652-49187458	0	-	49186652	49186731	789624	2	181,469,	0,337,
#Partially deleted in new
chr12	49188735	49208901	chr12:49188735-49208901	0	+	49188735	49188735	8553170	2	490,70,	0,20096,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	49196783	49197062	chr12:49196783-49197062	3	+	49196783	49196783	8553170	1	279,	0,
#Partially deleted in new
chr12	49208545	49256489	chr12:49208545-49256489	0	+	49208545	49208545	8553170	3	404,76,93,	0,19545,47851,
#Partially deleted in new
chr12	49227925	49273334	chr12:49227925-49273334	1	+	49227953	49273227	789624	4	241,223,149,1082,	0,41539,41902,44327,
#Partially deleted in new
chr12	49227929	49273328	chr12:49227929-49273328	0	+	49227953	49256450	789624	5	237,115,223,149,1076,	0,28467,41535,41898,44323,
#Partially deleted in new
chr12	49232789	49264756	chr12:49232789-49264756	3	-	49232789	49232789	8553170	2	1349,104,	0,31863,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	49264906	49274603	chr12:49264906-49274603	3	+	49265181	49273227	789624	4	278,223,149,2351,	0,4558,4921,7346,
#Partially deleted in new
chr12	49265080	49270196	chr12:49265080-49270196	1	+	49265181	49269994	789624	3	104,223,369,	0,4384,4747,
#Partially deleted in new
chr12	49265081	49273330	chr12:49265081-49273330	1	+	49265181	49273330	789624	5	103,223,144,431,174,	0,4383,4746,7556,8075,
#Partially deleted in new
chr12	49265155	49273306	chr12:49265155-49273306	3	-	49265155	49265155	8553170	2	43,637,	0,7514,
#Partially deleted in new
chr12	49269785	49273166	chr12:49269785-49273166	0	+	49269785	49269785	8553170	2	191,914,	0,2467,
#Deleted in new
chr12	49293251	49293997	chr12:49293251-49293997	0	+	49293251	49293251	8553170	2	290,274,	0,472,
#Deleted in new
chr12	49293701	49298686	chr12:49293701-49298686	3	+	49295200	49298353	789624	9	2044,61,96,168,126,221,50,80,399,	0,2476,2730,3187,3446,3655,3975,4256,4586,
#Deleted in new
chr12	49295361	49297238	chr12:49295361-49297238	0	+	49295443	49297238	789624	6	181,107,61,96,168,91,	0,277,816,1070,1527,1786,
#Deleted in new
chr12	49295750	49297424	chr12:49295750-49297424	0	+	49295750	49295750	8553170	5	488,96,168,126,68,	0,681,1138,1397,1606,
#Deleted in new
chr12	49295765	49296890	chr12:49295765-49296890	0	+	49295765	49295765	8553170	3	110,61,459,	0,412,666,
#Deleted in new
chr12	49297001	49298592	chr12:49297001-49298592	0	+	49297001	49298353	789624	6	55,126,221,50,80,308,	0,146,355,675,956,1283,
#Deleted in new
chr12	49297120	49298648	chr12:49297120-49298648	0	+	49297120	49297120	8553170	5	153,221,50,80,361,	0,236,556,837,1167,
#Deleted in new
chr12	49323235	49324296	chr12:49323235-49324296	1	+	49323608	49324274	789624	3	114,149,85,	0,368,976,
#Partially deleted in new
chr12	49323243	49331670	chr12:49323243-49331670	1	+	49323608	49331617	789624	14	106,149,193,158,138,83,53,122,129,84,60,135,1263,98,	0,360,601,2257,2503,2832,3424,3965,5683,5917,6151,6613,6901,8329,
#Deleted in new
chr12	49323254	49324392	chr12:49323254-49324392	1	+	49323608	49324252	789624	4	95,149,193,238,	0,349,590,900,
#Deleted in new
chr12	49323254	49324416	chr12:49323254-49324416	1	+	49323608	49324274	789624	4	95,149,193,186,	0,349,590,976,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	49323254	49329634	chr12:49323254-49329634	0	+	49323608	49325518	789624	8	95,149,60,53,122,129,84,240,	0,349,2246,3413,3954,5672,5906,6140,
#Partially deleted in new
chr12	49323255	49327331	chr12:49323255-49327331	0	+	49323608	49327331	789624	6	94,149,138,83,53,123,	0,348,2491,2820,3412,3953,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	49323256	49329598	chr12:49323256-49329598	0	+	49323608	49325518	789624	10	93,149,158,138,83,53,122,129,84,204,	0,347,2244,2490,2819,3411,3952,5670,5904,6138,
#Deleted in new
chr12	49323256	49324380	chr12:49323256-49324380	1	+	49323608	49324081	789624	3	93,149,536,	0,347,588,
#Deleted in new
chr12	49323272	49324365	chr12:49323272-49324365	1	+	49323608	49323767	789624	2	77,762,	0,331,
#Partially deleted in new
chr12	49323278	49331731	chr12:49323278-49331731	3	+	49323608	49331617	789624	15	71,149,193,158,138,83,53,122,129,84,60,135,799,194,159,	0,325,566,2222,2468,2797,3389,3930,5648,5882,6116,6578,6866,7935,8294,
#Partially deleted in new
chr12	49323278	49329061	chr12:49323278-49329061	0	+	49323608	49325518	789624	9	71,149,102,158,138,83,53,122,135,	0,325,566,2222,2468,2797,3389,3930,5648,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	49323282	49329785	chr12:49323282-49329785	0	+	49323608	49325826	789624	11	67,149,193,60,138,83,53,122,129,84,391,	0,321,562,2218,2464,2793,3385,3926,5644,5878,6112,
#Partially deleted in new
chr12	49323309	49327327	chr12:49323309-49327327	0	+	49323608	49327327	789624	8	40,149,193,158,138,83,53,101,	0,294,535,2191,2437,2766,3358,3917,
#Partially deleted in new
chr12	49323373	49325505	chr12:49323373-49325505	0	+	49323608	49325505	789624	3	379,193,5,	0,471,2127,
#Deleted in new
chr12	49325452	49326720	chr12:49325452-49326720	0	+	49325452	49325452	8553170	4	206,138,83,53,	0,294,623,1215,
#Partially deleted in new
chr12	49326640	49331708	chr12:49326640-49331708	1	+	49327315	49331617	789624	10	80,122,129,84,60,135,429,283,194,136,	0,568,2286,2520,2754,3216,3504,4020,4573,4932,
#Partially deleted in new
chr12	49332410	49337188	chr12:49332410-49337188	3	-	49333053	49336477	789624	2	823,1248,	0,3530,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	49346916	49353684	chr12:49346916-49353684	3	+	49348872	49351502	789624	4	635,462,947,2368,	0,727,1849,4400,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	49347037	49351914	chr12:49347037-49351914	1	+	49348872	49351502	789624	3	514,947,598,	0,1728,4279,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	49348007	49353924	chr12:49348007-49353924	0	+	49348872	49351502	789624	4	98,947,2091,103,	0,758,3309,5814,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	49351284	49354142	chr12:49351284-49354142	0	+	49351284	49351284	8553170	2	326,164,	0,2694,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	49351556	49357546	chr12:49351556-49357546	0	+	49351556	49351556	8553170	2	60,398,	0,5592,
#Partially deleted in new
chr12	49366583	49494771	chr12:49366583-49494771	0	+	49461012	49494771	789624	6	137,268,80,109,50,31,	0,94186,118006,122881,124098,128157,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	49366855	49489559	chr12:49366855-49489559	0	+	49461012	49489559	789624	5	64,63,268,80,95,	0,4372,93914,117734,122609,
#Partially deleted in new
chr12	49366904	49461037	chr12:49366904-49461037	0	+	49461012	49461037	789624	3	117,161,268,	0,87320,93865,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	49366904	49526365	chr12:49366904-49526365	0	+	49461012	49514559	789624	15	683,63,268,80,109,50,262,177,136,44,59,110,103,215,422,	0,4323,93865,117685,122560,123777,127836,129928,133165,145957,147650,152168,155846,157777,159039,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	49366904	49484668	chr12:49366904-49484668	0	+	49461012	49484668	789624	4	117,63,268,79,	0,4323,93865,117685,
#Partially deleted in new
chr12	49366908	49489561	chr12:49366908-49489561	0	+	49461012	49489561	789624	4	113,268,80,97,	0,93861,117681,122556,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	49366928	49461028	chr12:49366928-49461028	0	+	49461012	49461028	8553170	5	93,68,63,87,259,	0,591,4299,74801,93841,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	49366961	49461037	chr12:49366961-49461037	0	+	49461012	49461037	789624	5	60,68,63,93,268,	0,558,4266,39511,93808,
#Partially deleted in new
chr12	49367383	49484673	chr12:49367383-49484673	0	+	49461012	49484673	789624	4	204,87,268,84,	0,74346,93386,117206,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	49367461	49491159	chr12:49367461-49491159	0	+	49367461	49367461	8553170	5	126,268,80,109,478,	0,93308,117128,122003,123220,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	49367464	49527424	chr12:49367464-49527424	3	+	49461012	49526255	789624	15	123,63,84,268,80,109,50,262,177,136,59,110,103,215,1481,	0,3763,19589,93305,117125,122000,123217,127276,129368,132605,147090,151608,155286,157217,158479,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	49367474	49527419	chr12:49367474-49527419	1	+	49461012	49526255	789624	13	113,268,80,109,50,262,177,136,59,110,103,215,1476,	0,93295,117115,121990,123207,127266,129358,132595,147080,151598,155276,157207,158469,
#Partially deleted in new
chr12	49367495	49490691	chr12:49367495-49490691	0	+	49461012	49490691	789624	6	92,161,268,80,109,10,	0,86729,93274,117094,121969,123186,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	49367509	49527226	chr12:49367509-49527226	1	+	49461012	49526255	789624	14	78,63,268,80,109,50,262,177,136,59,110,103,215,1283,	0,3718,93260,117080,121955,123172,127231,129323,132560,147045,151563,155241,157172,158434,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	49367517	49484663	chr12:49367517-49484663	0	+	49461012	49484663	789624	4	70,93,268,74,	0,38955,93252,117072,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	49367546	49463625	chr12:49367546-49463625	1	+	49461012	49462477	789624	5	41,63,87,268,1351,	0,3681,74183,93223,94728,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	49367546	49461229	chr12:49367546-49461229	0	+	49367546	49367546	8553170	3	41,63,460,	0,3681,93223,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	49367546	49484595	chr12:49367546-49484595	0	+	49461012	49484595	789624	5	41,63,87,268,6,	0,3681,74183,93223,117043,
#Deleted in new
chr12	49389515	49390162	chr12:49389515-49390162	7	+	49389515	49389515	16724991	1	647,	0,
#Partially deleted in new
chr12	49442423	49442652	chr12:49442423-49442652	7	-	49442423	49442423	16724991	1	229,	0,
#Partially deleted in new
chr12	49490114	49514613	chr12:49490114-49514613	0	+	49490114	49490114	8553170	6	43,50,262,177,136,59,	0,567,4626,6718,9955,24440,
#Partially deleted in new
chr12	49490121	49496889	chr12:49490121-49496889	0	+	49490121	49490121	8553170	4	193,50,262,57,	0,560,4619,6711,
#Partially deleted in new
chr12	49514441	49522853	chr12:49514441-49522853	0	+	49514441	49514441	8553170	2	172,103,	0,8309,
#Partially deleted in new
chr12	49522748	49526198	chr12:49522748-49526198	0	+	49522748	49522748	8553170	3	105,215,121,	0,1933,3329,
#Partially deleted in new
chr12	49539156	49558308	chr12:49539156-49558308	3	+	49539416	49557953	789624	15	336,234,135,134,244,158,208,279,200,250,218,332,107,77,955,	0,1742,2473,3549,4118,4758,5018,9738,10284,10923,15180,16463,17213,18026,18197,
#Partially deleted in new
chr12	49539156	49558253	chr12:49539156-49558253	0	+	49539416	49542353	8553170	16	336,234,135,75,134,244,158,208,279,200,250,218,332,107,77,900,	0,1742,2473,3177,3549,4118,4758,5018,9738,10284,10923,15180,16463,17213,18026,18197,
#Deleted in new
chr12	49541093	49543878	chr12:49541093-49543878	0	+	49541093	49541093	8553170	5	39,135,134,244,97,	0,536,1612,2181,2688,
#Partially deleted in new
chr12	49544253	49546240	chr12:49544253-49546240	0	+	49544253	49544253	8553170	2	129,103,	0,1884,
#Deleted in new
chr12	49556171	49557637	chr12:49556171-49557637	0	+	49556171	49556171	8553170	3	305,77,284,	0,1011,1182,
#Deleted in new
chr12	49556543	49560302	chr12:49556543-49560302	0	-	49556657	49560302	789624	7	207,128,88,83,93,29,8,	0,2299,2670,2909,3185,3395,3751,
#Partially deleted in new
chr12	49558294	49568145	chr12:49558294-49568145	1	-	49558642	49563530	789624	13	435,128,88,83,93,29,76,139,109,110,159,139,98,	0,548,919,1158,1434,1644,2000,4706,5143,6186,6442,7234,9753,
#Partially deleted in new
chr12	49558300	49568131	chr12:49558300-49568131	0	-	49564825	49565644	789624	13	429,128,88,83,93,29,76,139,109,110,159,139,84,	0,542,913,1152,1428,1638,1994,4700,5137,6180,6436,7228,9747,
#Partially deleted in new
chr12	49558301	49567750	chr12:49558301-49567750	0	-	49558301	49558301	8553170	14	428,128,88,83,93,29,76,139,109,110,159,139,765,104,	0,541,912,1151,1427,1637,1993,4699,5136,6179,6435,7227,7775,9345,
#Partially deleted in new
chr12	49558319	49568153	chr12:49558319-49568153	3	-	49558642	49566731	789624	15	410,128,88,83,93,29,76,139,109,110,159,139,139,120,106,	0,523,894,1133,1409,1619,1975,4681,5118,6161,6417,7209,7757,8402,9728,
#Partially deleted in new
chr12	49558362	49568101	chr12:49558362-49568101	1	-	49558642	49566731	789624	16	367,128,88,83,93,29,76,139,109,110,159,139,139,120,103,54,	0,480,851,1090,1366,1576,1932,4638,5075,6118,6374,7166,7714,8359,9284,9685,
#Deleted in new
chr12	49558478	49559260	chr12:49558478-49559260	0	-	49558478	49558478	8553170	2	251,418,	0,364,
#Deleted in new
chr12	49558503	49559780	chr12:49558503-49559780	0	-	49559272	49559780	789624	5	226,128,119,83,52,	0,339,710,949,1225,
#Partially deleted in new
chr12	49558572	49563075	chr12:49558572-49563075	0	-	49558572	49558572	8553170	8	157,128,88,83,93,29,71,75,	0,270,641,880,1156,1366,1722,4428,
#Partially deleted in new
chr12	49558642	49566439	chr12:49558642-49566439	1	-	49558642	49566439	789624	14	87,128,88,83,93,29,76,139,109,110,159,139,139,49,	0,200,571,810,1086,1296,1652,4358,4795,5838,6094,6886,7434,7748,
#Partially deleted in new
chr12	49559012	49568132	chr12:49559012-49568132	0	-	49559012	49559012	8553170	3	410,579,85,	0,7250,9035,
#Partially deleted in new
chr12	49559737	49568100	chr12:49559737-49568100	0	-	49559737	49566186	789624	10	84,29,76,139,109,110,159,139,139,53,	0,201,557,3263,3700,4743,4999,5791,6339,8310,
#Deleted in new
chr12	49563486	49567832	chr12:49563486-49567832	0	-	49563486	49566731	789624	7	60,110,159,139,139,120,149,	0,994,1250,2042,2590,3235,4197,
#Deleted in new
chr12	49564480	49567873	chr12:49564480-49567873	0	-	49564480	49566731	789624	6	110,159,139,139,120,227,	0,256,1048,1596,2241,3166,
#Deleted in new
chr12	49564762	49567850	chr12:49564762-49567850	0	-	49564762	49566731	789624	5	133,151,139,120,103,	0,766,1314,1959,2985,
#Deleted in new
chr12	49565529	49568128	chr12:49565529-49568128	0	-	49565529	49565529	8553170	3	138,765,81,	0,547,2518,
#Partially deleted in new
chr12	49568217	49583264	chr12:49568217-49583264	0	+	49568217	49568217	8553170	3	506,71,335,	0,5440,14712,
#Partially deleted in new
chr12	49568235	49600142	chr12:49568235-49600142	0	+	49568235	49568235	8553170	2	488,315,	0,31592,
#Partially deleted in new
chr12	49568371	49630625	chr12:49568371-49630625	0	+	49630607	49630625	8553170	3	352,98,81,	0,54265,62173,
#Deleted in new
chr12	49576839	49577505	chr12:49576839-49577505	3	-	49576839	49576839	8553170	2	475,95,	0,571,
#Partially deleted in new
chr12	49582884	49598789	chr12:49582884-49598789	0	-	49587604	49598789	789624	4	225,191,170,35,	0,4677,5569,15870,
#Partially deleted in new
chr12	49582885	49605627	chr12:49582885-49605627	0	-	49605303	49605477	789624	7	224,170,193,1666,183,226,426,	0,5568,15869,16583,20299,21427,22316,
#Partially deleted in new
chr12	49583207	49605618	chr12:49583207-49605618	1	-	49584513	49605477	789624	5	1399,128,183,226,237,	0,17799,19977,21105,22174,
#Partially deleted in new
chr12	49583560	49604731	chr12:49583560-49604731	0	+	49583560	49583560	8553170	2	187,555,	0,20616,
#Partially deleted in new
chr12	49584277	49600478	chr12:49584277-49600478	0	-	49587604	49600478	789624	5	337,191,170,193,1010,	0,3284,4176,14477,15191,
#Partially deleted in new
chr12	49587504	49605639	chr12:49587504-49605639	3	-	49587604	49605477	789624	7	248,170,193,1666,183,226,258,	0,949,11250,11964,15680,16808,17877,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	49593103	49593213	chr12:49593103-49593213	3	+	49593103	49593103	8553170	1	110,	0,
#Deleted in new
chr12	49594090	49594258	chr12:49594090-49594258	7	+	49594090	49594090	16724991	1	168,	0,
#Deleted in new
chr12	49595147	49595688	chr12:49595147-49595688	7	+	49595147	49595147	16724991	1	541,	0,
#Partially deleted in new
chr12	49599825	49604719	chr12:49599825-49604719	0	+	49599825	49599825	8553170	2	1318,543,	0,4351,
#Partially deleted in new
chr12	49619333	49619612	chr12:49619333-49619612	7	+	49619333	49619333	16724991	1	279,	0,
#Partially deleted in new
chr12	49623413	49632037	chr12:49623413-49632037	0	+	49623413	49623413	8553170	4	180,81,144,178,	0,7131,7987,8446,
#Partially deleted in new
chr12	49623435	49644665	chr12:49623435-49644665	3	+	49623590	49644192	789624	26	158,81,144,66,28,26,111,121,25,207,124,65,165,109,151,134,115,92,117,138,96,87,175,62,144,566,	0,7109,7965,8424,9160,9419,9578,9991,10201,10450,10896,11102,11663,11929,12407,13280,14034,14297,18472,18799,19144,19494,19787,20255,20425,20664,
#Partially deleted in new
chr12	49623569	49634819	chr12:49623569-49634819	0	+	49623569	49623569	8553170	9	24,144,1021,111,121,25,207,124,282,	0,7831,8290,9444,9857,10067,10316,10762,10968,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr12	49623619	49644666	chr12:49623619-49644666	1	+	49631400	49644192	789624	25	551,144,66,28,26,111,121,25,207,124,65,165,109,151,134,115,92,96,138,96,90,175,62,144,567,	0,7781,8240,8976,9235,9394,9807,10017,10266,10712,10918,11479,11745,12223,13096,13850,14113,18309,18615,18960,19307,19603,20071,20241,20480,
#Partially deleted in new
chr12	49630543	49644666	chr12:49630543-49644666	1	+	49630607	49644192	789624	25	82,144,66,28,26,111,121,25,207,124,65,165,109,151,134,115,92,117,138,96,90,175,62,144,567,	0,857,1316,2052,2311,2470,2883,3093,3342,3788,3994,4555,4821,5299,6172,6926,7189,11364,11691,12036,12383,12679,13147,13317,13556,
#Deleted in new
chr12	49630543	49633817	chr12:49630543-49633817	0	+	49630543	49630543	8553170	7	82,144,66,28,26,534,181,	0,857,1316,2052,2311,2470,3093,
#Deleted in new
chr12	49632728	49633931	chr12:49632728-49633931	0	+	49632728	49632728	8553170	5	152,111,121,25,46,	0,285,698,908,1157,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr12	49636498	49707414	chr12:49636498-49707414	3	-	49645814	49707180	789624	26	9405,124,93,102,161,130,81,69,235,203,125,69,280,102,150,111,75,94,77,109,153,84,77,81,84,360,	0,10387,10777,11204,11694,12530,12760,12971,13192,14177,14669,14883,15434,16727,17226,17693,18411,19905,20324,20583,21943,25467,29333,29628,31972,70556,
#Partially deleted in new
chr12	49637556	49642304	chr12:49637556-49642304	0	+	49637556	49637556	8553170	3	268,117,70,	0,4351,4678,
#Partially deleted in new
chr12	49637818	49643914	chr12:49637818-49643914	0	+	49637818	49643230	789624	8	6,117,138,96,49,175,62,54,	0,4089,4416,4761,5111,5404,5872,6042,
#Partially deleted in new
chr12	49637941	49639143	chr12:49637941-49639143	0	-	49637941	49637941	8553170	2	579,141,	0,1061,
#Deleted in new
chr12	49641945	49643245	chr12:49641945-49643245	0	+	49641945	49641945	8553170	4	79,441,87,23,	0,289,984,1277,
#Deleted in new
chr12	49642634	49643811	chr12:49642634-49643811	0	+	49642634	49642634	8553170	2	41,882,	0,295,
#Partially deleted in new
chr12	49644930	49707220	chr12:49644930-49707220	1	-	49646661	49707180	789624	27	973,115,124,93,99,161,130,81,69,235,203,125,69,280,102,150,111,75,94,77,109,153,84,77,81,84,166,	0,1708,1955,2345,2772,3262,4098,4328,4539,4760,5745,6237,6451,7002,8295,8794,9261,9979,11473,11892,12151,13511,17035,20901,21196,23540,62124,
#Partially deleted in new
chr12	49644952	49707393	chr12:49644952-49707393	1	-	49645814	49707180	789624	25	951,124,93,102,161,130,81,69,235,203,125,69,280,102,150,111,75,94,77,109,84,77,81,84,339,	0,1933,2323,2750,3240,4076,4306,4517,4738,5723,6215,6429,6980,8273,8772,9239,9957,11451,11870,12129,17013,20879,21174,23518,62102,
#Deleted in new
chr12	49644952	49652242	chr12:49644952-49652242	0	-	49644952	49644952	8553170	13	951,124,93,99,161,130,81,69,235,203,125,69,310,	0,1933,2323,2750,3240,4076,4306,4517,4738,5723,6215,6429,6980,
#Partially deleted in new
chr12	49661734	49668554	chr12:49661734-49668554	0	-	49661734	49661734	8553170	4	315,77,81,84,	0,4097,4392,6736,
#Partially deleted in new
chr12	49666158	49708165	chr12:49666158-49708165	0	-	49666158	49688477	789624	4	49,84,182,232,	0,2312,22286,41775,
#Partially deleted in new
chr12	49707724	49752526	chr12:49707724-49752526	0	+	49752493	49752526	789624	4	115,163,128,63,	0,7656,33477,44739,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	49707732	49715777	chr12:49707732-49715777	0	+	49707732	49707732	8553170	2	107,397,	0,7648,
#Partially deleted in new
chr12	49707732	49753039	chr12:49707732-49753039	0	+	49752493	49753039	789624	4	107,163,86,67,	0,7648,44731,45240,
#Deleted in new
chr12	49709236	49709336	chr12:49709236-49709336	7	+	49709236	49709236	16724991	1	100,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	49741543	49758265	chr12:49741543-49758265	0	+	49752493	49758265	789624	6	68,117,84,109,121,39,	0,8074,10922,11429,14091,16683,
#Partially deleted in new
chr12	49741546	49758462	chr12:49741546-49758462	0	+	49752493	49758462	789624	7	65,130,86,109,121,49,80,	0,2866,10917,11426,14088,16680,16836,
#Partially deleted in new
chr12	49741548	49755756	chr12:49741548-49755756	0	+	49752493	49755756	789624	6	63,159,130,86,109,122,	0,408,2864,10915,11424,14086,
#Partially deleted in new
chr12	49741556	49764933	chr12:49741556-49764933	3	+	49752493	49762896	789624	10	55,86,109,121,49,98,80,101,76,2061,	0,10907,11416,14078,16670,16826,17126,17664,20147,21316,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	49741556	49755756	chr12:49741556-49755756	0	+	49752493	49755756	789624	5	55,149,86,109,122,	0,1860,10907,11416,14078,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	49741556	49752542	chr12:49741556-49752542	0	+	49752493	49752542	789624	3	55,239,79,	0,8061,10907,
#Partially deleted in new
chr12	49741556	49758707	chr12:49741556-49758707	0	+	49752493	49758358	789624	7	55,86,109,121,49,129,25,	0,10907,11416,14078,16670,16795,17126,
#Partially deleted in new
chr12	49741556	49764737	chr12:49741556-49764737	1	+	49742136	49762896	789624	11	55,324,86,109,121,49,98,80,101,76,1865,	0,400,10907,11416,14078,16670,16826,17126,17664,20147,21316,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	49741567	49755756	chr12:49741567-49755756	0	+	49752493	49755756	789624	6	44,159,239,86,109,122,	0,389,8050,10896,11405,14067,
#Deleted in new
chr12	49741570	49742488	chr12:49741570-49742488	0	+	49741570	49741570	8553170	2	41,537,	0,381,
#Partially deleted in new
chr12	49741570	49753049	chr12:49741570-49753049	0	+	49752493	49753049	789624	5	41,159,170,86,77,	0,386,867,10893,11402,
#Partially deleted in new
chr12	49741573	49764726	chr12:49741573-49764726	1	+	49752493	49762896	789624	11	38,159,86,109,121,49,98,80,101,76,1854,	0,383,10890,11399,14061,16653,16809,17109,17647,20130,21299,
#Partially deleted in new
chr12	49741607	49758438	chr12:49741607-49758438	0	+	49752493	49758438	789624	6	161,86,109,121,49,56,	0,10856,11365,14027,16619,16775,
#Partially deleted in new
chr12	49741607	49752524	chr12:49741607-49752524	0	+	49752493	49752524	789624	4	161,159,170,61,	0,349,830,10856,
#Partially deleted in new
chr12	49741808	49764934	chr12:49741808-49764934	1	+	49742136	49762896	789624	10	472,86,109,121,49,98,80,101,76,2062,	0,10655,11164,13826,16418,16574,16874,17412,19895,21064,
#Partially deleted in new
chr12	49741821	49758686	chr12:49741821-49758686	0	+	49752493	49758686	789624	7	294,86,109,121,49,98,4,	0,10642,11151,13813,16405,16561,16861,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	49743416	49755736	chr12:49743416-49755736	0	+	49752493	49755736	789624	4	149,86,109,102,	0,9047,9556,12218,
#Partially deleted in new
chr12	49750619	49762948	chr12:49750619-49762948	1	+	49752493	49762896	789624	10	86,86,109,121,49,98,80,101,76,76,	0,1844,2353,5015,7607,7763,8063,8601,11084,12253,
#Partially deleted in new
chr12	49752455	49764742	chr12:49752455-49764742	1	+	49752493	49762896	789624	9	94,109,121,49,98,80,101,76,1870,	0,517,3179,5771,5927,6227,6765,9248,10417,
#Partially deleted in new
chr12	49752963	49764723	chr12:49752963-49764723	1	+	49753027	49762896	789624	8	118,121,49,98,80,101,76,1851,	0,2671,5263,5419,5719,6257,8740,9909,
#Partially deleted in new
chr12	49753037	49758708	chr12:49753037-49758708	0	+	49753037	49753037	8553170	4	44,121,49,326,	0,2597,5189,5345,
#Partially deleted in new
chr12	49758206	49761783	chr12:49758206-49761783	0	+	49758206	49758206	8553170	5	69,98,80,101,80,	0,176,476,1014,3497,
#Partially deleted in new
chr12	49758803	49762137	chr12:49758803-49762137	0	+	49758803	49758803	8553170	2	518,434,	0,2900,
#Partially deleted in new
chr12	49759135	49763094	chr12:49759135-49763094	0	+	49759135	49759135	8553170	3	186,76,222,	0,2568,3737,
#Partially deleted in new
chr12	49770959	49771136	chr12:49770959-49771136	7	+	49770959	49770959	16724991	1	177,	0,
#Partially deleted in new
chr12	49791145	49828425	chr12:49791145-49828425	3	-	49791838	49804044	789624	13	906,143,309,82,163,2630,114,120,39,69,159,62,104,	0,1300,1532,2206,2588,3619,7204,10702,11812,11951,12776,14834,37176,
#Partially deleted in new
chr12	49791145	49797002	chr12:49791145-49797002	0	-	49792367	49797002	789624	5	1443,309,82,163,2238,	0,1532,2206,2588,3619,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	49802267	49805719	chr12:49802267-49805719	0	-	49802267	49802267	8553170	3	729,69,1798,	0,829,1654,
#Partially deleted in new
chr12	49802723	49805390	chr12:49802723-49805390	0	-	49802723	49802723	8553170	2	442,1469,	0,1198,
#Partially deleted in new
chr12	49805937	49828750	chr12:49805937-49828750	0	-	49805937	49805937	8553170	2	104,429,	0,22384,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	49828541	49841143	chr12:49828541-49841143	3	+	49828541	49828541	789624	3	207,149,2722,	0,393,9880,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	49828592	49832466	chr12:49828592-49832466	0	+	49828592	49828592	8553170	3	156,149,508,	0,342,3366,
#Partially deleted in new
chr12	49828722	49840204	chr12:49828722-49840204	1	+	49828722	49828722	8553170	4	22,149,219,78,	0,212,9699,11404,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	49836038	49843129	chr12:49836038-49843129	3	-	49838370	49843087	789624	2	2977,276,	0,6815,
#Partially deleted in new
chr12	49838595	49843094	chr12:49838595-49843094	0	-	49838595	49838595	8553170	2	420,709,	0,3790,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	49861206	49865802	chr12:49861206-49865802	3	+	49861206	49861206	8553170	4	23,147,301,251,	0,2844,3942,4345,
#Deleted in new
chr12	49863172	49863503	chr12:49863172-49863503	7	+	49863172	49863172	16724991	1	331,	0,
#Partially deleted in new
chr12	49866895	49903887	chr12:49866895-49903887	3	-	49870503	49903792	789624	12	3758,54,96,88,38,40,51,54,65,104,196,110,	0,20490,22211,22585,23221,23787,24168,30135,30623,31091,34234,36882,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	49870399	49902379	chr12:49870399-49902379	1	-	49870503	49901202	789624	11	254,54,96,88,38,40,51,54,65,104,1250,	0,16986,18707,19081,19717,20283,20664,26631,27119,27587,30730,
#Partially deleted in new
chr12	49870414	49903869	chr12:49870414-49903869	0	-	49889156	49903792	789624	11	239,54,96,38,40,51,54,83,104,196,92,	0,16971,18692,19702,20268,20649,26616,27104,27572,30715,33363,
#Partially deleted in new
chr12	49870530	49900257	chr12:49870530-49900257	0	-	49870530	49900240	789624	11	123,54,96,88,38,40,51,54,65,104,102,	0,16855,18576,18950,19586,20152,20533,26500,26988,27456,29625,
#Partially deleted in new
chr12	49870572	49897069	chr12:49870572-49897069	0	-	49870572	49897069	789624	7	81,96,88,38,40,51,39,	0,18534,18908,19544,20110,20491,26458,
#Partially deleted in new
chr12	49889107	49904217	chr12:49889107-49904217	0	-	49889107	49903792	789624	11	95,88,38,40,51,54,65,104,196,205,44,	0,373,1009,1575,1956,7923,8411,8879,12022,14670,15066,
#Partially deleted in new
chr12	49891076	49902915	chr12:49891076-49902915	0	-	49891076	49901202	789624	6	38,54,65,104,196,90,	0,5954,6442,6910,10053,11749,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	49908881	49911278	chr12:49908881-49911278	0	-	49908881	49908881	8553170	2	232,68,	0,2329,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	49908881	49911842	chr12:49908881-49911842	1	-	49908881	49908881	8553170	4	232,146,118,29,	0,2027,2291,2932,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	49908881	49911863	chr12:49908881-49911863	0	-	49908881	49908881	789624	2	232,50,	0,2932,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	49908892	49911857	chr12:49908892-49911857	3	-	49908892	49908892	789624	3	2162,118,44,	0,2280,2921,
#Partially deleted in new
chr12	49910444	49911858	chr12:49910444-49911858	0	-	49910444	49910444	8553170	2	846,45,	0,1369,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	49911952	49926339	chr12:49911952-49926339	3	+	49911952	49911952	789624	6	131,1756,732,152,127,259,	0,9973,11829,12983,13309,14128,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	49911979	49920518	chr12:49911979-49920518	0	+	49911979	49911979	8553170	2	104,513,	0,8026,
#Partially deleted in new
chr12	49924357	49926489	chr12:49924357-49926489	0	+	49924357	49924357	8553170	3	156,152,409,	0,578,1723,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	49924999	49930010	chr12:49924999-49930010	1	+	49924999	49924999	8553170	5	88,65,136,123,312,	0,1081,1948,4376,4699,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	49929397	49930320	chr12:49929397-49930320	0	+	49929397	49929397	8553170	2	101,424,	0,499,
#Partially deleted in new
chr12	49950740	49958373	chr12:49950740-49958373	0	+	49950830	49955826	789624	6	450,165,81,25,155,886,	0,3414,3889,4658,5045,6747,
#Partially deleted in new
chr12	49950745	49958881	chr12:49950745-49958881	3	+	49950830	49955608	0	4	445,165,81,3483,	0,3409,3884,4653,
#Partially deleted in new
chr12	49950753	49954710	chr12:49950753-49954710	0	+	49950830	49954710	789624	3	437,291,81,	0,3401,3876,
#Partially deleted in new
chr12	49951511	49962783	chr12:49951511-49962783	3	-	49951511	49951511	789624	3	158,170,117,	0,407,11155,
#Partially deleted in new
chr12	49951967	49962922	chr12:49951967-49962922	1	-	49951967	49951967	789624	3	121,215,256,	0,2166,10699,
#Partially deleted in new
chr12	49954638	49956125	chr12:49954638-49956125	3	-	49954638	49954638	8553170	2	19,541,	0,946,
#Partially deleted in new
chr12	49958871	49962924	chr12:49958871-49962924	1	-	49958871	49958871	8553170	2	773,258,	0,3795,
#Deleted in new
chr12	49961869	49965681	chr12:49961869-49965681	3	+	49962017	49965177	0	4	511,165,84,690,	0,1622,2222,3122,
#Deleted in new
chr12	49963574	49965215	chr12:49963574-49965215	0	+	49963574	49963574	8553170	2	601,224,	0,1417,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	49967193	49977139	chr12:49967193-49977139	0	+	49967193	49967193	8553170	7	186,952,182,1095,565,81,2068,	0,852,3181,5287,6724,7552,7878,
#Deleted in new
chr12	49967238	49975695	chr12:49967238-49975695	1	+	49974443	49975671	789624	6	141,182,55,159,81,231,	0,3136,5242,7085,7507,8226,
#Deleted in new
chr12	49972836	49975883	chr12:49972836-49975883	1	+	49973173	49975671	0	4	739,159,81,419,	0,1487,1909,2628,
#Deleted in new
chr12	49972836	49974007	chr12:49972836-49974007	1	+	49973173	49974007	789624	2	739,90,	0,1081,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	49973173	49977139	chr12:49973173-49977139	3	+	49973173	49975671	0	5	402,159,81,275,1328,	0,1150,1572,2291,2638,
#Partially deleted in new
chr12	49976922	49992358	chr12:49976922-49992358	1	-	49976949	49992352	789624	3	137,136,114,	0,15075,15322,
#Partially deleted in new
chr12	49989161	50025461	chr12:49989161-50025461	3	-	49990267	50016715	0	17	1182,109,136,133,106,199,96,165,131,118,81,54,70,137,203,89,64,	0,1522,2836,3083,3388,4969,5252,7878,9979,10454,12010,13085,15073,16094,17272,27469,36236,
#Partially deleted in new
chr12	49989161	50025438	chr12:49989161-50025438	1	-	49990267	50016715	0	19	1182,109,136,133,106,199,96,165,131,118,81,54,70,137,203,89,63,116,41,	0,1522,2836,3083,3388,4969,5252,7878,9979,10454,12010,13085,15073,16094,17272,27469,30582,31900,36236,
#Partially deleted in new
chr12	49989163	50025400	chr12:49989163-50025400	1	-	49990267	50016715	0	17	1180,109,136,133,106,199,96,165,131,118,81,54,70,137,203,89,73,	0,1520,2834,3081,3386,4967,5250,7876,9977,10452,12008,13083,15071,16092,17270,27467,36164,
#Partially deleted in new
chr12	49989978	50016720	chr12:49989978-50016720	1	-	49990267	50016715	0	16	365,109,136,133,106,199,96,165,131,118,81,54,70,137,203,90,	0,705,2019,2266,2571,4152,4435,7061,9162,9637,11193,12268,14256,15277,16455,26652,
#Partially deleted in new
chr12	49990267	50025494	chr12:49990267-50025494	1	-	49990267	50016715	0	19	76,109,136,133,106,199,96,165,131,118,81,54,70,137,203,89,74,116,97,	0,416,1730,1977,2282,3863,4146,6772,8873,9348,10904,11979,13967,14988,16166,26363,28248,30794,35130,
#Partially deleted in new
chr12	49992078	49999736	chr12:49992078-49999736	0	-	49992078	49999736	789624	7	55,133,106,199,96,131,121,	0,166,471,2052,2335,7062,7537,
#Partially deleted in new
chr12	49997068	50002691	chr12:49997068-50002691	0	-	49997068	49997068	8553170	6	136,131,118,81,54,61,	0,2072,2547,4103,5178,5562,
#Partially deleted in new
chr12	49997130	50025493	chr12:49997130-50025493	0	-	49997130	49999170	789624	6	74,131,118,81,54,96,	0,2010,2485,4041,5116,28267,
#Partially deleted in new
chr12	49997159	50025461	chr12:49997159-50025461	0	-	50001241	50016715	789624	7	45,131,118,81,54,89,64,	0,1981,2456,4012,5087,19471,28238,
#Partially deleted in new
chr12	49999138	50025448	chr12:49999138-50025448	0	-	49999138	50016715	789624	9	133,118,81,54,70,137,203,85,51,	0,477,2033,3108,5096,6117,7295,17492,26259,
#Partially deleted in new
chr12	49999309	50004271	chr12:49999309-50004271	0	-	49999309	49999309	8553170	4	424,81,54,37,	0,1862,2937,4925,
#Partially deleted in new
chr12	49999674	50025477	chr12:49999674-50025477	0	-	49999674	50016696	789624	7	59,81,54,70,137,89,80,	0,1497,2572,4560,5581,16956,25723,
#Partially deleted in new
chr12	50001170	50025463	chr12:50001170-50025463	0	-	50001170	50016696	789624	6	82,54,70,137,89,136,	0,1076,3064,4085,15460,24157,
#Partially deleted in new
chr12	50001171	50025416	chr12:50001171-50025416	0	-	50001171	50006547	789624	6	81,54,70,137,203,89,	0,1075,3063,4084,5262,24156,
#Partially deleted in new
chr12	50002247	50025518	chr12:50002247-50025518	0	-	50002247	50006547	789624	5	53,70,137,203,121,	0,1987,3008,4186,23150,
#Partially deleted in new
chr12	50002271	50025434	chr12:50002271-50025434	0	-	50002271	50016715	789624	6	29,70,137,203,85,62,	0,1963,2984,4162,14359,23101,
#Partially deleted in new
chr12	50004233	50025451	chr12:50004233-50025451	0	-	50004233	50018551	789624	6	71,137,203,85,74,54,	0,1022,2200,12397,14282,21164,
#Partially deleted in new
chr12	50004233	50025435	chr12:50004233-50025435	0	-	50006546	50016715	789624	5	71,137,203,81,63,	0,1022,2200,12401,21139,
#Partially deleted in new
chr12	50004264	50025436	chr12:50004264-50025436	0	-	50004264	50016715	789624	5	40,137,203,85,109,	0,991,2169,12366,21063,
#Partially deleted in new
chr12	50004277	50025557	chr12:50004277-50025557	0	-	50004277	50016715	789624	5	27,137,203,89,107,	0,978,2156,12353,21173,
#Partially deleted in new
chr12	50005255	50033136	chr12:50005255-50033136	0	-	50005255	50016696	789624	4	137,89,171,167,	0,11375,26441,27714,
#Partially deleted in new
chr12	50005255	50025443	chr12:50005255-50025443	0	-	50005255	50006547	789624	3	137,203,46,	0,1178,20142,
#Partially deleted in new
chr12	50005263	50025483	chr12:50005263-50025483	0	-	50005263	50016715	789624	5	129,203,89,74,86,	0,1170,11367,13252,20134,
#Partially deleted in new
chr12	50005290	50017084	chr12:50005290-50017084	0	-	50005290	50016715	789624	4	102,203,89,145,	0,1143,11340,11649,
#Partially deleted in new
chr12	50005293	50025435	chr12:50005293-50025435	0	-	50005293	50016715	789624	5	99,203,89,116,63,	0,1140,11337,15768,20079,
#Partially deleted in new
chr12	50005346	50025494	chr12:50005346-50025494	0	-	50005346	50016715	789624	5	46,203,89,116,97,	0,1087,11284,15715,20051,
#Partially deleted in new
chr12	50005357	50025488	chr12:50005357-50025488	0	-	50005357	50016715	789624	5	35,203,85,116,91,	0,1076,11273,15704,20040,
#Partially deleted in new
chr12	50057547	50083611	chr12:50057547-50083611	1	+	50058766	50081649	789624	12	369,378,196,151,128,157,57,154,230,80,105,2067,	0,1203,2211,19665,20452,20873,21376,22354,22950,23554,23712,23997,
#Partially deleted in new
chr12	50057703	50083611	chr12:50057703-50083611	3	+	50058766	50081649	789624	12	213,378,196,151,128,157,57,154,92,80,105,2067,	0,1047,2055,19509,20296,20717,21220,22198,22794,23398,23556,23841,
#Partially deleted in new
chr12	50057744	50083611	chr12:50057744-50083611	0	+	50058766	50078000	789624	13	172,378,196,82,151,128,157,57,154,92,80,105,2067,	0,1006,2014,19223,19468,20255,20676,21179,22157,22753,23357,23515,23800,
#Partially deleted in new
chr12	50059886	50081940	chr12:50059886-50081940	0	+	50059886	50081649	789624	11	68,93,151,128,157,57,154,92,80,105,396,	0,17081,17326,18113,18534,19037,20015,20611,21215,21373,21658,
#Partially deleted in new
chr12	50070739	50080782	chr12:50070739-50080782	0	+	50070739	50070739	8553170	7	154,151,128,157,57,154,422,	0,6473,7260,7681,8184,9162,9621,
#Partially deleted in new
chr12	50073574	50083277	chr12:50073574-50083277	1	+	50073584	50081649	789624	10	670,151,128,157,57,154,92,80,105,1733,	0,3638,4425,4846,5349,6327,6923,7527,7685,7970,
#Deleted in new
chr12	50076749	50077262	chr12:50076749-50077262	0	+	50076749	50076749	8553170	2	300,50,	0,463,
#Partially deleted in new
chr12	50078461	50079942	chr12:50078461-50079942	0	+	50078461	50078461	8553170	2	519,41,	0,1440,
#Deleted in new
chr12	50080497	50082818	chr12:50080497-50082818	0	+	50080497	50081649	789624	5	92,80,105,234,103,	0,604,762,1047,2218,
#Partially deleted in new
chr12	50084971	50100712	chr12:50084971-50100712	3	+	50085369	50099000	789624	13	575,188,43,123,123,117,102,162,98,136,123,102,1766,	0,1189,1649,1784,2391,3549,4912,5269,5521,9465,11878,13742,13975,
#Partially deleted in new
chr12	50085199	50100642	chr12:50085199-50100642	1	+	50085369	50099000	789624	12	347,188,43,123,123,117,102,162,98,136,102,1696,	0,961,1421,1556,2163,3321,4684,5041,5293,9237,13514,13747,
#Deleted in new
chr12	50085324	50090326	chr12:50085324-50090326	0	+	50085369	50090326	789624	7	222,188,43,123,117,102,86,	0,836,1296,1431,3196,4559,4916,
#Deleted in new
chr12	50085327	50090566	chr12:50085327-50090566	0	+	50085369	50090566	789624	7	219,188,43,123,102,162,74,	0,833,1293,1428,4556,4913,5165,
#Deleted in new
chr12	50085341	50089422	chr12:50085341-50089422	0	+	50085341	50085341	8553170	6	205,188,43,123,123,902,	0,819,1279,1414,2021,3179,
#Deleted in new
chr12	50085352	50086917	chr12:50085352-50086917	0	+	50085352	50085352	8553170	4	194,188,43,162,	0,808,1268,1403,
#Deleted in new
chr12	50085682	50086872	chr12:50085682-50086872	0	+	50086169	50086872	789624	4	188,188,43,117,	0,478,938,1073,
#Partially deleted in new
chr12	50088234	50100149	chr12:50088234-50100149	1	+	50088238	50099000	789624	9	56,113,102,162,98,136,123,102,1203,	0,290,1649,2006,2258,6202,8615,10479,10712,
#Partially deleted in new
chr12	50094505	50099844	chr12:50094505-50099844	0	+	50094505	50099000	789624	6	67,123,102,195,79,45,	0,2344,4208,4441,4981,5294,
#Partially deleted in new
chr12	50096658	50099097	chr12:50096658-50099097	0	+	50096658	50096658	8553170	3	314,102,151,	0,2055,2288,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	50098494	50099246	chr12:50098494-50099246	0	+	50098494	50098494	8553170	2	321,300,	0,452,
#Deleted in new
chr12	50099429	50100318	chr12:50099429-50100318	0	+	50099429	50099429	8553170	2	136,265,	0,624,
#Partially deleted in new
chr12	50103818	50111319	chr12:50103818-50111319	3	+	50104050	50109519	0	8	273,178,141,139,113,234,107,1897,	0,755,1729,2469,2986,3748,4205,5604,
#Deleted in new
chr12	50103981	50106387	chr12:50103981-50106387	0	+	50104050	50104641	789624	5	110,44,178,141,100,	0,433,592,1566,2306,
#Partially deleted in new
chr12	50104007	50108108	chr12:50104007-50108108	0	+	50104007	50104007	8553170	6	84,178,141,139,113,85,	0,566,1540,2280,2797,4016,
#Partially deleted in new
chr12	50104007	50110086	chr12:50104007-50110086	1	+	50104050	50109519	0	8	84,178,72,139,113,234,107,664,	0,566,1609,2280,2797,3559,4016,5415,
#Deleted in new
chr12	50104007	50106042	chr12:50104007-50106042	0	+	50104007	50104007	8553170	3	84,178,495,	0,566,1540,
#Partially deleted in new
chr12	50104346	50107513	chr12:50104346-50107513	0	+	50104346	50104346	8553170	5	112,178,141,113,41,	0,227,1201,2458,3126,
#Partially deleted in new
chr12	50105145	50106916	chr12:50105145-50106916	0	+	50105145	50105145	8553170	3	543,139,112,	0,1142,1659,
#Partially deleted in new
chr12	50111978	50120451	chr12:50111978-50120451	3	+	50120043	50120217	789624	2	323,416,	0,8057,
#Partially deleted in new
chr12	50112081	50120451	chr12:50112081-50120451	1	+	50120043	50120217	789624	3	220,72,416,	0,750,7954,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	50112196	50165618	chr12:50112196-50165618	3	+	50112196	50112196	8553170	2	105,593,	0,52829,
#Partially deleted in new
chr12	50112236	50120451	chr12:50112236-50120451	1	+	50120043	50120217	789624	2	261,416,	0,7799,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	50112253	50123782	chr12:50112253-50123782	1	+	50112253	50112253	8553170	2	48,419,	0,11110,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	50129305	50167533	chr12:50129305-50167533	1	-	50130544	50144791	789624	11	1389,157,107,129,93,51,58,131,106,201,433,	0,5240,6426,6635,8422,9261,12747,13768,14646,15463,37795,
#Partially deleted in new
chr12	50129791	50167302	chr12:50129791-50167302	0	-	50135468	50167297	789624	12	903,103,157,220,107,129,93,51,58,131,106,202,	0,3170,4754,5641,5940,6149,7936,8775,12261,13282,14160,37309,
#Partially deleted in new
chr12	50129797	50167422	chr12:50129797-50167422	3	-	50130544	50167297	789624	10	897,157,107,129,93,51,58,131,106,322,	0,4748,5934,6143,7930,8769,12255,13276,14154,37303,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	50129797	50167320	chr12:50129797-50167320	0	-	50136059	50167297	789624	10	897,1107,157,107,129,93,51,131,106,220,	0,3164,4748,5934,6143,7930,8769,13276,14154,37303,
#Partially deleted in new
chr12	50129797	50136013	chr12:50129797-50136013	0	-	50130639	50136013	789624	3	897,107,73,	0,5934,6143,
#Partially deleted in new
chr12	50129797	50135792	chr12:50129797-50135792	0	-	50130680	50135792	789624	4	897,103,157,61,	0,3164,4748,5934,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	50129798	50167303	chr12:50129798-50167303	0	-	50144944	50167297	789624	11	896,157,107,129,93,51,58,131,106,201,203,	0,4747,5933,6142,7929,8768,12254,13275,14153,14970,37302,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	50129798	50144136	chr12:50129798-50144136	0	-	50129798	50129798	8553170	8	896,303,107,129,93,51,58,1063,	0,4601,5933,6142,7929,8768,12254,13275,
#Partially deleted in new
chr12	50129857	50133165	chr12:50129857-50133165	0	-	50129857	50129857	8553170	2	837,204,	0,3104,
#Partially deleted in new
chr12	50130412	50134828	chr12:50130412-50134828	0	-	50130412	50130412	8553170	2	282,283,	0,4133,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	50133078	50134706	chr12:50133078-50134706	0	-	50133078	50133078	8553170	2	990,161,	0,1467,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	50133784	50135537	chr12:50133784-50135537	0	-	50133784	50133784	8553170	3	284,157,105,	0,761,1648,
#Partially deleted in new
chr12	50134572	50142093	chr12:50134572-50142093	0	-	50134572	50142093	789624	4	130,107,129,41,	0,1159,1368,7480,
#Partially deleted in new
chr12	50134619	50167393	chr12:50134619-50167393	0	-	50136059	50167297	789624	8	83,107,129,93,51,58,131,293,	0,1112,1321,3108,3947,7433,8454,32481,
#Partially deleted in new
chr12	50135405	50137816	chr12:50135405-50137816	0	-	50135405	50135405	8553170	4	211,107,129,89,	0,326,535,2322,
#Partially deleted in new
chr12	50135439	50137793	chr12:50135439-50137793	0	-	50135439	50135439	8553170	3	399,129,66,	0,501,2288,
#Partially deleted in new
chr12	50135518	50167300	chr12:50135518-50167300	0	-	50136059	50167297	789624	8	134,107,129,93,51,131,106,200,	0,213,422,2209,3048,7555,8433,31582,
#Partially deleted in new
chr12	50135731	50167343	chr12:50135731-50167343	0	-	50135731	50167297	789624	7	107,129,51,58,131,106,243,	0,209,2835,6321,7342,8220,31369,
#Partially deleted in new
chr12	50135957	50143372	chr12:50135957-50143372	0	-	50135957	50135957	8553170	4	112,93,51,299,	0,1770,2609,7116,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	50142079	50144499	chr12:50142079-50144499	0	-	50142079	50142079	8553170	4	31,131,106,297,	0,994,1872,2123,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	50143071	50144371	chr12:50143071-50144371	0	-	50143071	50143071	8553170	2	133,420,	0,880,
#Partially deleted in new
chr12	50143079	50167326	chr12:50143079-50167326	0	-	50165939	50167297	789624	4	125,106,122,226,	0,872,22742,24021,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	50143164	50167359	chr12:50143164-50167359	0	-	50148551	50167297	789624	4	40,106,117,259,	0,787,5307,23936,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	50144018	50167505	chr12:50144018-50167505	0	-	50144018	50144018	8553170	3	39,78,405,	0,3307,23082,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	50144348	50167369	chr12:50144348-50167369	0	-	50145024	50167297	789624	3	16,293,269,	0,420,22752,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	50165935	50167300	chr12:50165935-50167300	0	-	50165935	50165935	8553170	2	381,200,	0,1165,
#Partially deleted in new
chr12	50175787	50283546	chr12:50175787-50283546	3	-	50177063	50248751	0	11	2282,134,110,58,108,149,85,465,46,142,127,	0,6116,16664,20042,24989,28764,30196,46233,55877,72845,107632,
#Partially deleted in new
chr12	50175787	50283506	chr12:50175787-50283506	1	-	50177063	50248751	0	11	2282,134,113,58,108,149,85,465,46,142,87,	0,6116,16664,20042,24989,28764,30196,46233,55877,72845,107632,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	50175787	50202112	chr12:50175787-50202112	1	-	50177063	50200842	0	5	2282,134,110,58,1336,	0,6116,16664,20042,24989,
#Partially deleted in new
chr12	50175787	50200847	chr12:50175787-50200847	1	-	50177063	50200842	789624	5	2282,131,110,58,71,	0,6116,16664,20042,24989,
#Partially deleted in new
chr12	50175787	50222348	chr12:50175787-50222348	1	-	50177063	50222170	0	8	2282,134,110,58,108,149,85,328,	0,6116,16664,20042,24989,28764,30196,46233,
#Partially deleted in new
chr12	50175789	50222705	chr12:50175789-50222705	1	-	50177063	50222170	0	8	2280,134,113,58,108,149,85,685,	0,6114,16662,20040,24987,28762,30194,46231,
#Partially deleted in new
chr12	50176884	50222356	chr12:50176884-50222356	1	-	50177063	50222170	789624	8	1185,131,110,58,108,149,85,336,	0,5019,15567,18945,23892,27667,29099,45136,
#Partially deleted in new
chr12	50177005	50283456	chr12:50177005-50283456	0	-	50185421	50248751	789624	12	1064,134,59,110,58,108,149,85,465,46,142,37,	0,4898,8384,15446,18824,23771,27546,28978,45015,54659,71627,106414,
#Partially deleted in new
chr12	50177697	50182179	chr12:50177697-50182179	0	-	50177697	50177697	8553170	2	372,276,	0,4206,
#Partially deleted in new
chr12	50177773	50196047	chr12:50177773-50196047	0	-	50177773	50177773	8553170	4	296,131,58,70,	0,4130,18056,18204,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	50185579	50191363	chr12:50185579-50191363	3	-	50185579	50185579	8553170	2	4682,31,	0,5753,
#Partially deleted in new
chr12	50192451	50220556	chr12:50192451-50220556	0	-	50192451	50192451	8553170	7	110,58,108,22,149,85,34,	0,3378,8325,8851,12100,13532,28071,
#Partially deleted in new
chr12	50195617	50200892	chr12:50195617-50200892	0	-	50195617	50195617	8553170	2	270,116,	0,5159,
#Partially deleted in new
chr12	50204343	50222165	chr12:50204343-50222165	0	-	50204343	50204343	8553170	3	357,85,145,	0,1640,17677,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	50217661	50218343	chr12:50217661-50218343	7	-	50217661	50217661	16724991	2	211,143,	0,539,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	50219603	50229984	chr12:50219603-50229984	3	+	50219603	50219603	8553170	2	130,195,	0,10186,
#Partially deleted in new
chr12	50222166	50224481	chr12:50222166-50224481	0	-	50222166	50222166	8553170	2	319,224,	0,2091,
#Partially deleted in new
chr12	50222259	50283484	chr12:50222259-50283484	0	-	50222259	50248751	789624	5	226,46,142,104,65,	0,9405,26373,27423,61160,
#Partially deleted in new
chr12	50222317	50249893	chr12:50222317-50249893	0	-	50222317	50248751	789624	4	168,46,142,211,	0,9347,26315,27365,
#Partially deleted in new
chr12	50234141	50234212	chr12:50234141-50234212	3	-	50234141	50234141	5263520	1	71,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	50256237	50256344	chr12:50256237-50256344	3	-	50256237	50256237	8553170	1	107,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	50286243	50289231	chr12:50286243-50289231	7	+	50286243	50286243	16724991	4	303,209,418,274,	0,973,1490,2714,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	50326229	50350885	chr12:50326229-50350885	1	-	50327244	50350864	789624	5	1028,186,152,193,557,	0,4343,5440,7681,24099,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	50326229	50396622	chr12:50326229-50396622	1	-	50327244	50396484	789624	8	1028,186,152,193,5920,171,220,330,	0,4343,5440,7681,24099,34526,36915,70063,
#Partially deleted in new
chr12	50327308	50334103	chr12:50327308-50334103	0	-	50330719	50334103	789624	3	96,186,181,	0,3264,6614,
#Partially deleted in new
chr12	50327311	50396484	chr12:50327311-50396484	3	-	50327382	50396484	789624	8	93,186,152,193,5920,171,220,192,	0,3261,4358,6599,23017,33444,35833,68981,
#Deleted in new
chr12	50365651	50366086	chr12:50365651-50366086	7	+	50365651	50365651	16724991	1	435,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	50392382	50430551	chr12:50392382-50430551	0	+	50428978	50430551	789624	4	206,148,156,57,	0,35379,36552,38112,
#Partially deleted in new
chr12	50400808	50479996	chr12:50400808-50479996	1	+	50401010	50475864	0	15	220,148,156,76,137,104,111,54,213,104,49,162,122,169,4471,	0,26953,28126,29686,34679,36926,39630,40781,52651,53505,61773,66150,72606,73190,74717,
#Partially deleted in new
chr12	50400856	50477517	chr12:50400856-50477517	1	+	50401010	50475864	0	16	172,148,174,76,137,104,111,54,213,104,213,49,162,122,169,1992,	0,26905,28060,29638,34631,36878,39582,40733,52603,53457,60278,61725,66102,72558,73142,74669,
#Partially deleted in new
chr12	50400888	50429091	chr12:50400888-50429091	0	+	50402771	50429091	789624	4	140,139,148,157,	0,1786,26873,28046,
#Partially deleted in new
chr12	50400894	50429086	chr12:50400894-50429086	0	+	50428978	50429086	789624	5	134,53,100,148,152,	0,11510,19893,26867,28040,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	50400895	50437785	chr12:50400895-50437785	0	+	50428978	50437785	789624	7	133,89,148,156,76,137,51,	0,15450,26866,28039,29599,34592,36839,
#Partially deleted in new
chr12	50400898	50480004	chr12:50400898-50480004	3	+	50401010	50475864	0	16	130,148,156,76,137,104,111,54,213,104,213,49,162,122,169,4479,	0,26863,28036,29596,34589,36836,39540,40691,52561,53415,60236,61683,66060,72516,73100,74627,
#Partially deleted in new
chr12	50400906	50475962	chr12:50400906-50475962	1	+	50428978	50441618	789624	15	122,148,156,76,137,104,111,6,46,104,49,162,122,169,437,	0,26855,28028,29588,34581,36828,39532,40683,40691,53407,61675,66052,72508,73092,74619,
#Partially deleted in new
chr12	50400907	50461487	chr12:50400907-50461487	1	+	50401010	50461351	0	11	121,148,156,76,137,104,111,54,213,104,353,	0,26854,28027,29587,34580,36827,39531,40682,52552,53406,60227,
#Partially deleted in new
chr12	50400928	50476463	chr12:50400928-50476463	1	+	50401010	50475864	0	16	100,145,156,76,137,104,111,54,213,104,213,49,162,122,169,938,	0,26836,28006,29566,34559,36806,39510,40661,52531,53385,60206,61653,66030,72486,73070,74597,
#Partially deleted in new
chr12	50400928	50441618	chr12:50400928-50441618	1	+	50428978	50441618	789624	9	100,145,156,76,137,104,111,10,17,	0,26836,28006,29566,34559,36806,39510,40367,40673,
#Partially deleted in new
chr12	50400931	50435599	chr12:50400931-50435599	0	+	50401010	50435599	789624	5	97,148,156,73,112,	0,26830,28003,29566,34556,
#Partially deleted in new
chr12	50400949	50429089	chr12:50400949-50429089	0	+	50428978	50429089	789624	5	79,139,49,148,173,	0,1725,11455,26812,27967,
#Partially deleted in new
chr12	50400955	50461487	chr12:50400955-50461487	1	+	50428978	50461351	789624	12	73,49,148,156,76,137,104,111,54,213,104,353,	0,11449,26806,27979,29539,34532,36779,39483,40634,52504,53358,60179,
#Partially deleted in new
chr12	50400984	50477497	chr12:50400984-50477497	1	+	50401010	50475864	0	15	44,148,156,76,137,104,111,54,104,213,49,162,122,169,1972,	0,26777,27950,29510,34503,36750,39454,40605,53329,60150,61597,65974,72430,73014,74541,
#Partially deleted in new
chr12	50401000	50437778	chr12:50401000-50437778	0	+	50401010	50437778	789624	6	28,145,156,73,137,44,	0,26764,27934,29497,34487,36734,
#Partially deleted in new
chr12	50401107	50435552	chr12:50401107-50435552	0	+	50428978	50435552	789624	5	114,148,156,76,65,	0,26654,27827,29387,34380,
#Partially deleted in new
chr12	50440438	50476456	chr12:50440438-50476456	0	+	50440438	50475864	789624	10	111,54,213,104,213,49,162,122,109,931,	0,1151,13021,13875,20696,22143,26520,32976,33560,35087,
#Partially deleted in new
chr12	50440478	50454962	chr12:50440478-50454962	0	+	50440478	50440478	8553170	4	71,54,213,649,	0,1111,12981,13835,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	50504984	50680282	chr12:50504984-50680282	0	+	50504984	50504984	8553170	8	256,72,129,126,213,156,120,1604,	0,120991,135739,155209,166201,169489,170344,173694,
#Boundary problem: need 38, got 0, diff 38, mapped 0.0
chr12	50505106	50748667	chr12:50505106-50748667	3	+	50505140	50744839	789624	38	134,72,129,126,213,156,120,198,92,111,124,110,103,65,94,120,115,140,137,81,128,115,202,110,81,124,122,112,110,131,169,171,62,58,75,178,124,4081,	0,120869,135617,155087,166079,169367,170222,173572,175565,178031,180726,181466,185942,187842,190160,190741,191954,193221,193959,199033,201431,203341,209288,213602,213848,216166,218095,219668,222596,223441,226262,227259,229028,229966,231929,234302,236309,239480,
#Deleted in new
chr12	50633272	50633376	chr12:50633272-50633376	3	+	50633272	50633272	8553170	1	104,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	50640804	50680282	chr12:50640804-50680282	0	+	50640804	50640804	8553170	7	48,30,126,213,156,120,1604,	0,14206,19389,30381,33669,34524,37874,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	50656972	50657078	chr12:50656972-50657078	3	+	50656972	50656972	8553170	1	106,	0,
#Partially deleted in new
chr12	50685847	50686892	chr12:50685847-50686892	0	+	50685847	50685847	8553170	2	109,320,	0,725,
#Partially deleted in new
chr12	50685885	50745095	chr12:50685885-50745095	0	+	50685885	50692960	789624	27	71,110,65,94,120,115,140,137,81,128,115,202,110,81,124,122,112,110,131,169,171,62,58,75,178,124,509,	0,687,7063,9381,9962,11175,12442,13180,18254,20652,22562,28509,32823,33069,35387,37316,38889,41817,42662,45483,46480,48249,49187,51150,53523,55530,58701,
#Partially deleted in new
chr12	50756891	50757433	chr12:50756891-50757433	7	+	50756891	50756891	16724991	2	56,137,	0,405,
#Partially deleted in new
chr12	50763709	50814192	chr12:50763709-50814192	0	+	50780145	50814192	789624	5	32,99,101,134,183,	0,16430,32199,45746,50300,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	50764077	50809475	chr12:50764077-50809475	0	+	50780145	50795931	789624	5	230,99,118,101,20,	0,16062,24130,31831,45378,
#Partially deleted in new
chr12	50764291	50821122	chr12:50764291-50821122	3	+	50780145	50819779	789624	7	16,99,101,134,183,160,1488,	0,15848,31617,45164,49718,49988,55343,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	50764479	50820010	chr12:50764479-50820010	0	+	50780145	50814084	789624	6	75,77,99,183,160,376,	0,11102,15660,49530,49800,55155,
#Partially deleted in new
chr12	50764508	50814368	chr12:50764508-50814368	0	+	50780145	50814368	789624	6	139,99,101,134,183,89,	0,15631,31400,44947,49501,49771,
#Deleted in new
chr12	50806334	50806437	chr12:50806334-50806437	7	-	50806334	50806334	16724991	1	103,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	50841497	50841785	chr12:50841497-50841785	3	-	50841497	50841497	8553170	1	288,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	50842919	50887884	chr12:50842919-50887884	1	+	50842964	50885556	789624	4	232,196,269,2639,	0,922,15865,42326,
#Partially deleted in new
chr12	50842932	50887884	chr12:50842932-50887884	3	+	50842964	50887513	789624	5	219,196,269,143,623,	0,909,15852,42313,44329,
#Deleted in new
chr12	50847924	50848312	chr12:50847924-50848312	7	-	50847924	50847924	16724991	1	388,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	50923471	50932510	chr12:50923471-50932510	3	+	50925038	50930150	789624	3	609,870,2597,	0,1195,6442,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	50924750	50932517	chr12:50924750-50932517	1	+	50925038	50930150	789624	2	786,2604,	0,5163,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	50924982	50932507	chr12:50924982-50932507	0	+	50925038	50930150	789624	3	554,378,893,	0,4931,6632,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	50925040	50932438	chr12:50925040-50932438	0	+	50925040	50930150	789624	3	496,509,841,	0,4873,6557,
#Deleted in new
chr12	50934941	50935464	chr12:50934941-50935464	3	-	50934941	50934941	8553170	1	523,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	50939926	50940026	chr12:50939926-50940026	3	-	50939926	50939926	8553170	1	100,	0,
#Deleted in new
chr12	50949116	50949384	chr12:50949116-50949384	7	-	50949116	50949116	16724991	1	268,	0,
#Partially deleted in new
chr12	50953921	50970506	chr12:50953921-50970506	3	+	50953998	50970506	789624	3	171,135,65,	0,7046,16520,
#Deleted in new
chr12	50953923	50954356	chr12:50953923-50954356	3	-	50953923	50953923	8553170	1	433,	0,
#Partially deleted in new
chr12	50979400	50992209	chr12:50979400-50992209	0	-	50981725	50992209	789624	6	142,165,54,154,74,20,	0,2238,8981,11394,12198,12789,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr12	50979534	51026384	chr12:50979534-51026384	1	-	50981725	51010728	0	17	2269,54,154,74,150,120,87,159,156,68,71,107,120,126,149,72,75,	0,8847,11260,12064,12655,13275,15009,16094,17282,19639,19810,20778,25253,25776,28941,31160,46775,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr12	50979783	51026384	chr12:50979783-51026384	1	-	50981725	51010728	0	17	2020,54,154,74,150,120,87,159,156,68,71,107,120,126,149,72,75,	0,8598,11011,11815,12406,13026,14760,15845,17033,19390,19561,20529,25004,25527,28692,30911,46526,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr12	50979808	51026339	chr12:50979808-51026339	1	-	50988324	51010728	789624	18	1995,136,154,74,150,120,87,159,156,68,71,107,36,120,126,149,72,30,	0,8491,10986,11790,12381,13001,14735,15820,17008,19365,19536,20504,20789,24979,25502,28667,30886,46501,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr12	50979819	51026368	chr12:50979819-51026368	0	-	50981725	51010728	0	18	239,165,54,154,74,150,120,87,159,156,68,71,107,120,126,149,72,54,	0,1819,8562,10975,11779,12370,12990,14724,15809,16997,19354,19525,20493,24968,25491,28656,30875,46495,
#Partially deleted in new
chr12	50981008	51026338	chr12:50981008-51026338	1	-	50981725	51010728	0	17	795,54,154,74,150,120,87,159,156,68,71,107,120,126,149,72,24,	0,7373,9786,10590,11181,11801,13535,14620,15808,18165,18336,19304,23779,24302,27467,29686,45306,
#Partially deleted in new
chr12	50981437	51000418	chr12:50981437-51000418	0	-	50991594	51000418	789624	12	366,54,154,186,150,120,87,159,156,68,71,106,	0,6944,9357,10049,10752,11372,13106,14191,15379,17736,17907,18875,
#Partially deleted in new
chr12	50985991	51026384	chr12:50985991-51026384	1	-	50988324	51010728	0	16	2444,154,74,150,120,87,159,156,68,71,107,120,126,149,72,75,	0,4803,5607,6198,6818,8552,9637,10825,13182,13353,14321,18796,19319,22484,24703,40318,
#Partially deleted in new
chr12	50985991	51028566	chr12:50985991-51028566	1	-	50988324	51028225	0	17	2444,154,74,150,120,87,159,156,68,71,107,120,126,149,72,235,56,	0,4803,5607,6198,6818,8552,9637,10825,13182,13353,14321,18796,19319,22484,24703,42185,42519,
#Partially deleted in new
chr12	50985991	51026416	chr12:50985991-51026416	3	-	50988324	51010728	0	16	2444,154,74,150,120,87,159,156,68,71,107,120,126,149,72,107,	0,4803,5607,6198,6818,8552,9637,10825,13182,13353,14321,18796,19319,22484,24703,40318,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	50985992	50995092	chr12:50985992-50995092	0	-	50985992	50985992	8553170	6	2443,154,74,150,120,549,	0,4802,5606,6197,6817,8551,
#Partially deleted in new
chr12	50986070	51026351	chr12:50986070-51026351	0	-	50986070	50986070	8553170	7	2365,154,186,150,120,87,42,	0,4724,5416,6119,6739,8473,40239,
#Partially deleted in new
chr12	50986080	51026351	chr12:50986080-51026351	0	-	50996821	51010728	789624	16	2355,154,186,150,120,87,159,92,68,71,107,120,126,149,72,37,	0,4714,5406,6109,6729,8463,9548,10736,13093,13264,14232,18707,19230,22395,24614,40234,
#Partially deleted in new
chr12	50986163	51026351	chr12:50986163-51026351	0	-	51000576	51010728	789624	17	2272,154,74,150,120,87,159,156,68,71,107,71,120,126,149,72,37,	0,4631,5435,6026,6646,8380,9465,10653,13010,13181,14149,14399,18624,19147,22312,24531,40151,
#Partially deleted in new
chr12	50987945	51026141	chr12:50987945-51026141	1	-	50988324	51010728	0	16	490,154,74,150,120,87,159,156,68,71,107,120,126,149,72,367,	0,2849,3653,4244,4864,6598,7683,8871,11228,11399,12367,16842,17365,20530,22749,37829,
#Partially deleted in new
chr12	50988172	51009270	chr12:50988172-51009270	1	-	50988324	51009138	0	15	263,154,74,150,120,87,159,156,68,71,107,120,126,149,154,	0,2622,3426,4017,4637,6371,7456,8644,11001,11172,12140,16615,17138,20303,20944,
#Partially deleted in new
chr12	50988319	51026400	chr12:50988319-51026400	1	-	50988324	51005382	789624	16	116,154,74,150,120,87,159,156,68,71,107,120,126,69,72,91,	0,2475,3279,3870,4490,6224,7309,8497,10854,11025,11993,16468,16991,20156,22375,37990,
#Partially deleted in new
chr12	50988324	51028241	chr12:50988324-51028241	1	-	50988324	51028225	0	16	111,154,74,150,120,87,159,156,68,71,107,120,126,149,72,65,	0,2470,3274,3865,4485,6219,7304,8492,10849,11020,11988,16463,16986,20151,22370,39852,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	50990583	50991667	chr12:50990583-50991667	0	-	50990583	50990583	8553170	2	365,69,	0,1015,
#Partially deleted in new
chr12	50991598	50993144	chr12:50991598-50993144	0	-	50991598	50991598	8553170	3	74,150,335,	0,591,1211,
#Partially deleted in new
chr12	50995683	50999565	chr12:50995683-50999565	0	-	50995683	50995683	8553170	3	104,156,392,	0,1133,3490,
#Partially deleted in new
chr12	50996870	51026393	chr12:50996870-51026393	0	-	51005422	51010728	789624	10	102,68,71,107,120,126,25,149,72,84,	0,2303,2474,3442,7917,8440,8782,11605,13824,29439,
#Partially deleted in new
chr12	50996940	51026384	chr12:50996940-51026384	0	-	50996940	51010728	789624	7	32,68,71,107,149,72,70,	0,2233,2404,3372,11535,13754,29374,
#Partially deleted in new
chr12	50996960	51026391	chr12:50996960-51026391	0	-	50996960	51005382	789624	7	12,68,71,107,120,126,77,	0,2213,2384,3352,7827,8350,29354,
#Partially deleted in new
chr12	50999367	51026384	chr12:50999367-51026384	0	-	50999367	51010697	789624	7	48,107,120,126,39,72,75,	0,945,5420,5943,9218,11327,26942,
#Partially deleted in new
chr12	51000317	51026363	chr12:51000317-51026363	0	-	51000317	51005382	789624	5	102,120,126,149,49,	0,4470,4993,8158,25997,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	51000349	51005848	chr12:51000349-51005848	0	-	51000349	51000349	8553170	4	70,120,126,249,	0,4438,4961,5250,
#Partially deleted in new
chr12	51000401	51026384	chr12:51000401-51026384	0	-	51000401	51010728	789624	6	18,120,126,149,72,91,	0,4386,4909,8074,10293,25892,
#Partially deleted in new
chr12	51004837	51025781	chr12:51004837-51025781	0	-	51004837	51010728	789624	5	70,126,149,72,109,	0,473,3638,5857,20835,
#Partially deleted in new
chr12	51005321	51009168	chr12:51005321-51009168	0	-	51005321	51005321	8553170	3	356,149,52,	0,3154,3795,
#Partially deleted in new
chr12	51005403	51026365	chr12:51005403-51026365	0	-	51005403	51005403	8553170	4	274,149,72,56,	0,3072,5291,20906,
#Partially deleted in new
chr12	51008144	51026379	chr12:51008144-51026379	0	-	51008144	51008144	8553170	3	480,72,70,	0,2550,18165,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	51010719	51024843	chr12:51010719-51024843	0	-	51010719	51010728	8553170	2	47,483,	0,13641,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	51014133	51014241	chr12:51014133-51014241	3	-	51014133	51014133	8553170	1	108,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	51037498	51037602	chr12:51037498-51037602	3	+	51037498	51037498	8553170	1	104,	0,
#Partially deleted in new
chr12	51047961	51058087	chr12:51047961-51058087	0	+	51048275	51058087	789624	8	337,152,116,83,187,102,153,56,	0,1072,4130,5816,7873,8182,8388,10070,
#Partially deleted in new
chr12	51048300	51060409	chr12:51048300-51060409	0	+	51048356	51055894	789624	8	178,152,83,187,102,153,97,1049,	0,733,5477,7534,7843,8049,9731,11060,
#Partially deleted in new
chr12	51048312	51056237	chr12:51048312-51056237	0	+	51048312	51048312	8553170	5	59,152,116,187,94,	0,721,3779,7522,7831,
#Partially deleted in new
chr12	51048316	51056221	chr12:51048316-51056221	0	+	51048316	51048316	8553170	5	55,152,83,187,78,	0,717,5461,7518,7827,
#Partially deleted in new
chr12	51048317	51060421	chr12:51048317-51060421	3	+	51048356	51059431	789624	9	161,152,116,83,187,102,153,97,1061,	0,716,3774,5460,7517,7826,8032,9714,11043,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	51048317	51056775	chr12:51048317-51056775	0	+	51048317	51048317	8553170	4	161,152,153,96,	0,716,8032,8362,
#Partially deleted in new
chr12	51048317	51055977	chr12:51048317-51055977	0	+	51049079	51052113	789624	5	54,152,120,83,143,	0,716,3770,5460,7517,
#Partially deleted in new
chr12	51048317	51059805	chr12:51048317-51059805	1	+	51049079	51059431	789624	9	54,152,116,83,187,102,153,97,445,	0,716,3774,5460,7517,7826,8032,9714,11043,
#Partially deleted in new
chr12	51048318	51058128	chr12:51048318-51058128	0	+	51048318	51048318	8553170	4	53,152,153,97,	0,715,8031,9713,
#Partially deleted in new
chr12	51048319	51056391	chr12:51048319-51056391	0	+	51048356	51056391	789624	4	159,152,116,42,	0,714,3772,8030,
#Partially deleted in new
chr12	51048320	51058048	chr12:51048320-51058048	0	+	51048356	51058048	789624	7	158,152,49,187,102,153,17,	0,713,5491,7514,7823,8029,9711,
#Partially deleted in new
chr12	51048326	51052361	chr12:51048326-51052361	0	+	51048326	51048326	8553170	3	152,152,274,	0,707,3761,
#Partially deleted in new
chr12	51048326	51060424	chr12:51048326-51060424	0	+	51048356	51048482	789624	5	192,152,153,97,1064,	0,707,8023,9705,11034,
#Partially deleted in new
chr12	51048326	51059412	chr12:51048326-51059412	0	+	51056218	51059412	789624	6	45,152,102,153,97,52,	0,707,7817,8023,9705,11034,
#Partially deleted in new
chr12	51048326	51056428	chr12:51048326-51056428	0	+	51048356	51056428	789624	5	152,152,83,102,79,	0,707,5451,7817,8023,
#Partially deleted in new
chr12	51048326	51056490	chr12:51048326-51056490	0	+	51048356	51056490	789624	5	152,152,35,102,141,	0,707,7660,7817,8023,
#Partially deleted in new
chr12	51048326	51049430	chr12:51048326-51049430	0	+	51048326	51048326	8553170	2	152,397,	0,707,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	51048326	51056952	chr12:51048326-51056952	0	+	51048326	51048326	8553170	3	152,152,603,	0,707,8023,
#Partially deleted in new
chr12	51048326	51058067	chr12:51048326-51058067	0	+	51049079	51058067	789624	6	45,152,83,96,153,36,	0,707,5451,7823,8023,9705,
#Partially deleted in new
chr12	51048326	51055848	chr12:51048326-51055848	0	+	51048356	51052113	789624	5	152,152,120,83,14,	0,707,3761,5451,7508,
#Partially deleted in new
chr12	51048328	51052201	chr12:51048328-51052201	0	+	51048356	51052201	789624	3	150,173,110,	0,684,3763,
#Partially deleted in new
chr12	51048337	51060413	chr12:51048337-51060413	1	+	51048356	51059431	789624	9	141,152,155,83,187,102,153,97,1053,	0,696,3754,5440,7497,7806,8012,9694,11023,
#Partially deleted in new
chr12	51048337	51059532	chr12:51048337-51059532	0	+	51048356	51056359	789624	4	141,153,97,172,	0,8012,9694,11023,
#Partially deleted in new
chr12	51048340	51060369	chr12:51048340-51060369	1	+	51048356	51059431	789624	6	138,152,116,153,97,1009,	0,693,3751,8009,9691,11020,
#Partially deleted in new
chr12	51048342	51060421	chr12:51048342-51060421	0	+	51048342	51048342	8553170	3	843,116,1061,	0,3749,11018,
#Partially deleted in new
chr12	51048343	51060363	chr12:51048343-51060363	0	+	51048356	51058022	789624	5	135,152,153,123,1003,	0,690,8006,9662,11017,
#Partially deleted in new
chr12	51048343	51060303	chr12:51048343-51060303	0	+	51048356	51058072	789624	5	135,152,153,97,943,	0,690,8006,9688,11017,
#Partially deleted in new
chr12	51048345	51060401	chr12:51048345-51060401	1	+	51048356	51059431	789624	6	133,187,102,153,97,1041,	0,7489,7798,8004,9686,11015,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	51048357	51059659	chr12:51048357-51059659	0	+	51048357	51048357	8553170	6	14,152,153,97,135,299,	0,676,7992,9674,10246,11003,
#Partially deleted in new
chr12	51048873	51060421	chr12:51048873-51060421	0	+	51048873	51048873	789624	4	312,153,97,1061,	0,7476,9158,10487,
#Partially deleted in new
chr12	51049077	51059717	chr12:51049077-51059717	0	+	51049077	51059431	789624	3	108,153,357,	0,7272,10283,
#Partially deleted in new
chr12	51055698	51056529	chr12:51055698-51056529	0	+	51055698	51055698	8553170	2	547,180,	0,651,
#Partially deleted in new
chr12	51055879	51059534	chr12:51055879-51059534	0	+	51055879	51055879	8553170	3	623,97,174,	0,2152,3481,
#Partially deleted in new
chr12	51055908	51059702	chr12:51055908-51059702	0	+	51055908	51059431	789624	4	113,153,97,342,	0,441,2123,3452,
#Partially deleted in new
chr12	51056056	51059827	chr12:51056056-51059827	0	+	51056056	51056056	8553170	3	189,153,467,	0,293,3304,
#Partially deleted in new
chr12	51056178	51059867	chr12:51056178-51059867	0	+	51056178	51059435	789624	3	67,153,507,	0,171,3182,
#Partially deleted in new
chr12	51056370	51059649	chr12:51056370-51059649	0	+	51056370	51056370	8553170	3	132,54,289,	0,1704,2990,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	51057470	51060418	chr12:51057470-51060418	0	+	51057470	51057470	8553170	1	2948,	0,
#Partially deleted in new
chr12	51061204	51083550	chr12:51061204-51083550	3	-	51063745	51076561	789624	5	3465,297,260,237,212,	0,6468,12618,15206,22134,
#Partially deleted in new
chr12	51067898	51083582	chr12:51067898-51083582	0	-	51067898	51073951	789624	3	71,260,354,	0,5924,15330,
#Partially deleted in new
chr12	51073889	51083643	chr12:51073889-51083643	0	-	51073889	51076561	789624	3	193,237,415,	0,2521,9339,
#Partially deleted in new
chr12	51073927	51076835	chr12:51073927-51076835	0	-	51073927	51073927	8553170	2	155,425,	0,2483,
#Partially deleted in new
chr12	51073974	51083110	chr12:51073974-51083110	0	-	51073974	51076561	789624	3	108,237,104,	0,2436,9032,
#Partially deleted in new
chr12	51074057	51083583	chr12:51074057-51083583	0	-	51074057	51076561	789624	4	25,237,174,245,	0,2353,8463,9281,
#Partially deleted in new
chr12	51076415	51083664	chr12:51076415-51083664	0	-	51076415	51076415	8553170	5	82,27,34,107,326,	0,205,5012,6105,6923,
#Partially deleted in new
chr12	51076568	51083596	chr12:51076568-51083596	0	-	51076568	51076568	8553170	4	79,69,174,258,	0,4859,5952,6770,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	51093662	51172881	chr12:51093662-51172881	3	-	51095240	51172422	789624	15	1616,52,143,125,91,94,49,89,111,153,107,106,77,152,581,	0,2326,5113,5992,8272,10007,10492,12862,13573,15458,17214,22652,24008,24958,78638,
#Partially deleted in new
chr12	51094882	51173134	chr12:51094882-51173134	1	-	51095240	51172422	789624	13	396,52,143,125,89,111,153,107,106,77,152,134,82,	0,1106,3893,4772,11642,12353,14238,15994,21432,22788,23738,77418,78170,
#Partially deleted in new
chr12	51095157	51103931	chr12:51095157-51103931	0	-	51095157	51095157	8553170	6	121,52,143,125,91,262,	0,831,3618,4497,6777,8512,
#Partially deleted in new
chr12	51095221	51172912	chr12:51095221-51172912	1	-	51095240	51172422	789624	14	54,52,143,125,91,94,49,89,111,107,106,77,152,612,	0,767,3554,4433,6713,8448,8933,11303,12014,15655,21093,22449,23399,77079,
#Partially deleted in new
chr12	51096022	51172793	chr12:51096022-51172793	0	-	51096022	51117727	789624	14	18,143,125,91,94,49,89,111,153,107,106,77,152,193,	0,2753,3632,5912,7647,8132,10502,11213,13098,14854,20292,21648,22598,76578,
#Partially deleted in new
chr12	51106816	51107144	chr12:51106816-51107144	7	+	51106816	51106816	16724991	1	328,	0,
#Partially deleted in new
chr12	51124627	51125381	chr12:51124627-51125381	7	-	51124627	51124627	16724991	1	754,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	51156867	51156977	chr12:51156867-51156977	3	-	51156867	51156867	8553170	1	110,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	51162900	51163007	chr12:51162900-51163007	3	+	51162900	51162900	8553170	1	107,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	51186935	51217693	chr12:51186935-51217693	0	-	51197779	51206836	789624	11	3657,169,142,204,129,254,137,122,196,95,52,	0,4660,5394,9034,9863,10834,11614,12811,17237,19853,30706,
#Partially deleted in new
chr12	51189160	51197035	chr12:51189160-51197035	0	-	51189160	51189160	8553170	5	1432,169,142,204,237,	0,2435,3169,6809,7638,
#Partially deleted in new
chr12	51189160	51198167	chr12:51189160-51198167	0	-	51189160	51189160	8553170	6	1432,169,142,204,129,398,	0,2435,3169,6809,7638,8609,
#Partially deleted in new
chr12	51189199	51217671	chr12:51189199-51217671	3	-	51190246	51206836	789624	11	1393,169,142,204,129,254,226,122,196,95,30,	0,2396,3130,6770,7599,8570,9350,10547,14973,17589,28442,
#Partially deleted in new
chr12	51189430	51217708	chr12:51189430-51217708	1	-	51190246	51206836	789624	11	1162,169,142,204,129,254,129,117,196,95,67,	0,2165,2899,6539,7368,8339,9119,10316,14742,17358,28211,
#Partially deleted in new
chr12	51192389	51198023	chr12:51192389-51198023	0	-	51192389	51198023	789624	3	82,204,254,	0,3580,5380,
#Deleted in new
chr12	51196130	51197785	chr12:51196130-51197785	0	-	51196130	51196130	8553170	3	43,148,16,	0,668,1639,
#Partially deleted in new
chr12	51197974	51217693	chr12:51197974-51217693	0	-	51197974	51197974	8553170	5	49,137,122,196,52,	0,575,1772,6198,19667,
#Partially deleted in new
chr12	51198639	51217667	chr12:51198639-51217667	0	-	51198639	51198639	8553170	4	47,196,95,26,	0,5533,8149,19002,
#Partially deleted in new
chr12	51198698	51204368	chr12:51198698-51204368	0	-	51198698	51198698	8553170	3	77,122,196,	0,1048,5474,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	51201683	51202581	chr12:51201683-51202581	3	-	51201683	51201683	8553170	1	898,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	51204320	51207693	chr12:51204320-51207693	0	-	51204320	51204320	8553170	3	48,159,471,	0,2468,2902,
#Partially deleted in new
chr12	51238291	51243933	chr12:51238291-51243933	3	+	51238907	51242458	789624	4	629,119,246,1604,	0,2051,2579,4038,
#Partially deleted in new
chr12	51238723	51243931	chr12:51238723-51243931	1	+	51238907	51242458	789624	5	197,119,59,121,1602,	0,1619,2147,2272,3606,
#Partially deleted in new
chr12	51238817	51241071	chr12:51238817-51241071	0	+	51238817	51238817	8553170	4	103,119,116,201,	0,1525,1837,2053,
#Partially deleted in new
chr12	51238823	51242816	chr12:51238823-51242816	1	+	51238907	51242652	789624	4	97,119,169,487,	0,1519,2047,3506,
#Partially deleted in new
chr12	51238825	51246717	chr12:51238825-51246717	1	+	51238907	51246144	789624	4	95,119,246,657,	0,1517,2045,7235,
#Partially deleted in new
chr12	51238825	51242816	chr12:51238825-51242816	1	+	51238907	51242458	789624	3	95,119,487,	0,1517,3504,
#Partially deleted in new
chr12	51238826	51242474	chr12:51238826-51242474	0	+	51238826	51238826	8553170	3	94,246,145,	0,2044,3503,
#Partially deleted in new
chr12	51238836	51240856	chr12:51238836-51240856	0	+	51238836	51238836	8553170	2	84,514,	0,1506,
#Partially deleted in new
chr12	51238853	51242594	chr12:51238853-51242594	1	+	51238907	51242458	789624	4	67,119,150,265,	0,1489,2113,3476,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	51238885	51271362	chr12:51238885-51271362	1	+	51238907	51270744	789624	4	35,119,246,645,	0,1457,1985,31832,
#Partially deleted in new
chr12	51238902	51243785	chr12:51238902-51243785	0	+	51238907	51240988	789624	4	18,119,218,1456,	0,1440,1996,3427,
#Partially deleted in new
chr12	51238904	51242431	chr12:51238904-51242431	0	+	51238904	51238904	8553170	4	104,119,246,102,	0,1438,1966,3425,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	51238907	51243784	chr12:51238907-51243784	0	+	51238907	51238907	8553170	2	2209,1455,	0,3422,
#Partially deleted in new
chr12	51238913	51242451	chr12:51238913-51242451	0	+	51238913	51238913	8553170	4	80,119,246,122,	0,1429,1957,3416,
#Partially deleted in new
chr12	51239294	51242510	chr12:51239294-51242510	1	+	51240918	51242458	789624	4	41,119,246,181,	0,1048,1576,3035,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	51244557	51270890	chr12:51244557-51270890	3	-	51245940	51269278	789624	4	1562,81,72,635,	0,2193,24687,25698,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	51245350	51269320	chr12:51245350-51269320	0	-	51251503	51269278	789624	4	769,81,119,76,	0,1400,6114,23894,
#Partially deleted in new
chr12	51245350	51270198	chr12:51245350-51270198	1	-	51245940	51269278	789624	4	769,81,72,140,	0,1400,23894,24708,
#Partially deleted in new
chr12	51245387	51269949	chr12:51245387-51269949	1	-	51245940	51269278	789624	3	732,81,705,	0,1363,23857,
#Partially deleted in new
chr12	51245744	51270284	chr12:51245744-51270284	1	-	51245940	51246823	789624	5	375,81,20,72,29,	0,1006,7829,23500,24511,
#Partially deleted in new
chr12	51246084	51269958	chr12:51246084-51269958	0	-	51246084	51269278	789624	4	35,81,72,422,	0,666,23160,23452,
#Partially deleted in new
chr12	51246463	51269912	chr12:51246463-51269912	1	-	51246736	51269278	789624	3	368,72,376,	0,22781,23073,
#Partially deleted in new
chr12	51246596	51270184	chr12:51246596-51270184	1	-	51246736	51269278	789624	3	235,72,126,	0,22648,23462,
#Partially deleted in new
chr12	51281037	51324154	chr12:51281037-51324154	0	-	51281498	51324154	789624	12	491,72,81,754,83,76,86,108,95,55,81,133,	0,3678,7070,10553,14758,16051,18165,18569,21648,22049,32785,42984,
#Partially deleted in new
chr12	51281037	51324115	chr12:51281037-51324115	0	-	51281431	51324115	789624	11	491,65,754,83,76,86,108,96,95,55,94,	0,3678,10553,14758,16051,18165,18569,20982,21648,22049,42984,
#Partially deleted in new
chr12	51281037	51324154	chr12:51281037-51324154	0	-	51281037	51281037	8553170	12	491,72,81,754,83,76,86,108,761,55,81,133,	0,3678,7070,10553,14758,16051,18165,18569,20982,22049,32785,42984,
#Partially deleted in new
chr12	51281037	51324198	chr12:51281037-51324198	3	-	51281498	51324198	789624	13	491,72,81,754,83,76,86,108,96,95,55,81,177,	0,3678,7070,10553,14758,16051,18165,18569,20982,21648,22049,32785,42984,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	51281281	51324668	chr12:51281281-51324668	1	-	51281498	51324515	789624	13	247,72,81,754,83,76,86,108,96,95,55,81,156,	0,3434,6826,10309,14514,15807,17921,18325,20738,21404,21805,32541,43231,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	51292161	51297368	chr12:51292161-51297368	0	-	51292161	51292161	8553170	3	148,83,280,	0,3634,4927,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	51292201	51297373	chr12:51292201-51297373	0	-	51292201	51292201	8553170	3	143,83,285,	0,3594,4887,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	51302716	51324142	chr12:51302716-51324142	0	-	51304247	51324142	789624	5	64,55,146,81,121,	0,370,1403,11106,21305,
#Deleted in new
chr12	51322584	51324085	chr12:51322584-51324085	0	-	51322584	51322584	8553170	2	674,64,	0,1437,
#Deleted in new
chr12	51322747	51324093	chr12:51322747-51324093	0	-	51322747	51322747	8553170	2	341,72,	0,1274,
#Partially deleted in new
chr12	51328442	51346679	chr12:51328442-51346679	3	-	51328576	51346638	789624	8	152,150,146,137,126,101,83,57,	0,1241,11417,12801,14132,15310,17352,18180,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	51351246	51383563	chr12:51351246-51383563	1	-	51354378	51379781	789624	11	3246,153,102,132,201,118,235,150,173,594,103,	0,4559,6102,6883,7885,9474,12874,14183,25948,28044,32214,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	51353752	51391409	chr12:51353752-51391409	3	-	51354378	51379781	789624	12	740,153,102,132,201,118,235,150,173,594,88,123,	0,2053,3596,4377,5379,6968,10368,11677,23442,25538,37097,37534,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	51353768	51360226	chr12:51353768-51360226	0	-	51353768	51353768	8553170	5	724,153,102,132,1095,	0,2037,3580,4361,5363,
#Partially deleted in new
chr12	51354270	51379781	chr12:51354270-51379781	0	-	51359283	51379781	789624	9	222,153,102,132,201,235,150,173,491,	0,1535,3078,3859,4861,9850,11159,22924,25020,
#Partially deleted in new
chr12	51379369	51391652	chr12:51379369-51391652	0	-	51379369	51379781	789624	2	515,52,	0,12231,
#Partially deleted in new
chr12	51379412	51391436	chr12:51379412-51391436	0	-	51379412	51379781	789624	2	472,82,	0,11942,
#Partially deleted in new
chr12	51379545	51392867	chr12:51379545-51392867	0	-	51379545	51379781	789624	3	339,122,77,	0,3915,13245,
#Partially deleted in new
chr12	51379575	51391663	chr12:51379575-51391663	0	-	51379575	51379781	789624	4	309,122,88,63,	0,3885,11274,12025,
#Partially deleted in new
chr12	51379593	51391434	chr12:51379593-51391434	0	-	51379593	51379781	789624	4	291,122,88,80,	0,3867,11256,11761,
#Partially deleted in new
chr12	51379615	51391299	chr12:51379615-51391299	0	-	51379615	51379781	789624	4	269,122,88,218,	0,3845,11234,11466,
#Partially deleted in new
chr12	51379663	51391629	chr12:51379663-51391629	0	-	51379663	51379781	789624	5	221,197,91,88,29,	0,2649,3828,11186,11937,
#Partially deleted in new
chr12	51379711	51391436	chr12:51379711-51391436	0	-	51379711	51379781	789624	4	173,197,122,82,	0,2601,3749,11643,
#Partially deleted in new
chr12	51379712	51391652	chr12:51379712-51391652	0	-	51379712	51379781	789624	5	172,122,88,114,52,	0,3748,11137,11369,11888,
#Partially deleted in new
chr12	51379785	51391651	chr12:51379785-51391651	0	-	51379785	51379785	8553170	5	99,197,122,88,51,	0,2527,3675,11064,11815,
#Partially deleted in new
chr12	51379812	51391955	chr12:51379812-51391955	0	-	51379812	51379812	8553170	3	72,122,355,	0,3648,11788,
#Partially deleted in new
chr12	51379840	51391390	chr12:51379840-51391390	0	-	51379840	51379840	8553170	5	44,197,122,88,104,	0,2472,3620,11009,11446,
#Partially deleted in new
chr12	51382334	51391675	chr12:51382334-51391675	0	-	51382334	51382334	8553170	3	175,122,75,	0,1126,9266,
#Partially deleted in new
chr12	51382460	51391404	chr12:51382460-51391404	0	-	51382460	51382460	8553170	3	49,122,323,	0,1000,8621,
#Partially deleted in new
chr12	51382460	51391591	chr12:51382460-51391591	0	-	51382460	51382460	8553170	3	49,122,305,	0,1000,8826,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr12	51391316	51515763	chr12:51391316-51515763	1	+	51450904	51507438	0	25	172,82,147,136,161,189,92,158,88,147,101,175,134,246,106,162,114,162,252,69,174,138,92,96,8338,	0,49391,59559,60807,62222,66034,67242,68634,69887,70993,72297,78297,79075,79970,83025,83728,94470,97382,98383,102387,103628,105670,112712,114518,116109,
#Partially deleted in new
chr12	51391316	51474575	chr12:51391316-51474575	1	+	51450904	51474513	0	15	172,82,147,136,161,189,92,158,88,147,101,175,134,246,234,	0,49391,59559,60807,62222,66034,67242,68634,69887,70993,72297,78297,79075,79970,83025,
#Partially deleted in new
chr12	51391347	51403109	chr12:51391347-51403109	0	+	51391347	51391347	8553170	2	141,37,	0,11725,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	51391735	51462892	chr12:51391735-51462892	0	+	51391735	51391735	8553170	10	397,95,82,381,136,161,189,92,158,1689,	0,16067,48972,58906,60388,61803,65615,66823,68215,69468,
#Partially deleted in new
chr12	51403162	51497864	chr12:51403162-51497864	0	+	51403162	51403162	8553170	22	127,82,147,136,161,189,92,158,88,147,101,175,134,246,106,162,114,162,252,69,174,878,	0,37545,47713,48961,50376,54188,55396,56788,58041,59147,60451,66451,67229,68124,71179,71882,82624,85536,86537,90541,91782,93824,
#Partially deleted in new
chr12	51420099	51453586	chr12:51420099-51453586	0	+	51420099	51420099	8553170	5	109,82,147,136,48,	0,20608,30776,32024,33439,
#Partially deleted in new
chr12	51421955	51424611	chr12:51421955-51424611	3	-	51421955	51421955	8553170	2	222,125,	0,2531,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr12	51424770	51515763	chr12:51424770-51515763	3	+	51424987	51507438	0	25	265,82,147,136,161,189,92,158,88,147,101,175,134,246,106,162,114,162,252,69,174,138,92,96,8338,	0,15937,26105,27353,28768,32580,33788,35180,36433,37539,38843,44843,45621,46516,49571,50274,61016,63928,64929,68933,70174,72216,79258,81064,82655,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	51424867	51441179	chr12:51424867-51441179	0	+	51424867	51424867	789624	3	168,82,201,	0,15840,16111,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	51424933	51440852	chr12:51424933-51440852	0	+	51424933	51424933	8553170	2	102,145,	0,15774,
#Partially deleted in new
chr12	51424972	51497862	chr12:51424972-51497862	0	+	51424972	51424972	8553170	22	63,82,147,136,161,189,92,158,88,147,101,175,134,246,106,162,114,162,252,69,174,876,	0,15735,25903,27151,28566,32378,33586,34978,36231,37337,38641,44641,45419,46314,49369,50072,60814,63726,64727,68731,69972,72014,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr12	51425116	51480610	chr12:51425116-51480610	1	+	51450904	51480222	0	17	298,82,147,136,161,189,92,158,88,147,101,175,134,246,106,162,619,	0,15591,25759,27007,28422,32234,33442,34834,36087,37193,38497,44497,45275,46170,49225,49928,54875,
#Partially deleted in new
chr12	51440707	51497862	chr12:51440707-51497862	0	+	51440707	51440707	8553170	21	82,381,136,161,189,92,158,88,147,101,175,134,246,106,162,114,162,252,69,174,876,	0,9934,11416,12831,16643,17851,19243,20496,21602,22906,28906,29684,30579,33634,34337,45079,47991,48992,52996,54237,56279,
#Partially deleted in new
chr12	51450827	51457443	chr12:51450827-51457443	0	+	51450827	51450827	8553170	4	195,136,161,93,	0,1296,2711,6523,
#Partially deleted in new
chr12	51461217	51469681	chr12:51461217-51469681	0	+	51461217	51461217	8553170	6	74,147,101,108,86,68,	0,1092,2396,5187,6136,8396,
#Deleted in new
chr12	51469068	51471580	chr12:51469068-51471580	0	+	51469068	51469068	8553170	4	108,175,134,294,	0,545,1323,2218,
#Deleted in new
chr12	51494350	51495018	chr12:51494350-51495018	0	+	51494350	51494350	8553170	2	509,74,	0,594,
#Partially deleted in new
chr12	51494872	51497233	chr12:51494872-51497233	0	+	51494872	51494872	8553170	2	246,247,	0,2114,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	51501827	51509196	chr12:51501827-51509196	0	+	51501827	51501827	8553170	4	551,92,96,1771,	0,2201,4007,5598,
#Partially deleted in new
chr12	51590265	51662820	chr12:51590265-51662820	0	+	51662817	51662820	8553170	2	408,57,	0,72498,
#Partially deleted in new
chr12	51590924	51723140	chr12:51590924-51723140	1	+	51662817	51722190	789624	12	75,330,119,90,129,92,222,64,142,207,294,1595,	0,71839,93249,95443,96166,98080,108645,110219,111848,114492,115497,130621,
#Partially deleted in new
chr12	51590925	51766251	chr12:51590925-51766251	0	+	51590925	51590925	8553170	16	74,330,119,90,129,92,222,64,142,207,294,363,133,239,174,581,	0,71838,93248,95442,96165,98079,108644,110218,111847,114491,115496,130620,154977,160429,171577,174745,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	51591223	51702909	chr12:51591223-51702909	0	+	51662817	51688875	789624	9	136,330,119,90,129,1262,222,64,137,	0,71540,92950,95144,95867,97534,108346,109920,111549,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr12	51591235	51812864	chr12:51591235-51812864	3	+	51662817	51807429	789624	27	124,330,119,90,129,92,222,64,142,207,294,363,133,239,174,357,471,118,155,174,123,285,54,138,105,271,6583,	0,71528,92938,95132,95855,97522,108334,109908,111537,114181,115186,130310,154667,160119,171267,174435,177629,178632,179293,182953,189413,195306,197459,198045,199162,203135,215046,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr12	51591235	51812864	chr12:51591235-51812864	1	+	51662817	51807429	789624	26	124,330,119,90,129,92,222,64,142,207,294,363,133,239,174,357,471,118,155,174,285,54,138,105,271,6583,	0,71528,92938,95132,95855,97522,108334,109908,111537,114181,115186,130310,154667,160119,171267,174435,177629,178632,179293,182953,195306,197459,198045,199162,203135,215046,
#Partially deleted in new
chr12	51662817	51807429	chr12:51662817-51807429	1	+	51662817	51807429	789624	25	276,119,90,129,92,222,64,142,207,294,363,133,239,174,357,471,118,155,174,285,54,138,105,271,1148,	0,21356,23550,24273,25940,36752,38326,39955,42599,43604,58728,83085,88537,99685,102853,106047,107050,107711,111371,123724,125877,126463,127580,131553,143464,
#Partially deleted in new
chr12	51662817	51807429	chr12:51662817-51807429	1	+	51662817	51807429	789624	26	276,119,90,129,92,222,64,142,207,294,396,133,239,174,357,471,118,155,174,123,285,54,138,105,271,1148,	0,21356,23550,24273,25940,36752,38326,39955,42599,43604,58728,83085,88537,99685,102853,106047,107050,107711,111371,117831,123724,125877,126463,127580,131553,143464,
#Partially deleted in new
chr12	51662817	51807429	chr12:51662817-51807429	1	+	51662817	51807429	789624	26	276,119,90,129,92,222,64,142,207,294,363,133,239,174,357,471,118,155,174,123,285,54,138,105,271,1148,	0,21356,23550,24273,26187,36752,38326,39955,42599,43604,58728,83085,88537,99685,102853,106047,107050,107711,111371,117831,123724,125877,126463,127580,131553,143464,
#Partially deleted in new
chr12	51686422	51745948	chr12:51686422-51745948	0	+	51686422	51745948	789624	10	35,129,92,222,64,142,207,294,396,46,	0,668,2582,13147,14721,16350,18994,19999,35123,59480,
#Deleted in new
chr12	51712468	51713606	chr12:51712468-51713606	7	-	51712468	51712468	16724991	1	1138,	0,
#Partially deleted in new
chr12	51745900	51807000	chr12:51745900-51807000	0	+	51745900	51768169	789624	16	135,239,174,357,60,471,118,155,174,123,285,54,138,105,271,719,	0,5454,16602,19770,22212,22964,23967,24628,28288,34748,40641,42794,43380,44497,48470,60381,
#Partially deleted in new
chr12	51751376	51786771	chr12:51751376-51786771	0	+	51751376	51751376	8553170	9	217,174,357,471,118,155,174,70,230,	0,11126,14294,17488,18491,19152,22812,28825,35165,
#Deleted in new
chr12	51768971	51770009	chr12:51768971-51770009	0	+	51768971	51768971	8553170	2	364,142,	0,896,
#Deleted in new
chr12	51769956	51770379	chr12:51769956-51770379	0	+	51769956	51769956	8553170	2	29,71,	0,352,
#Deleted in new
chr12	51786764	51788547	chr12:51786764-51788547	0	+	51786764	51786764	8553170	2	62,31,	0,1752,
#Deleted in new
chr12	51809704	51810600	chr12:51809704-51810600	3	-	51809704	51809704	8553170	1	896,	0,
#Deleted in new
chr12	51813939	51814926	chr12:51813939-51814926	3	-	51813939	51814893	789624	1	987,	0,
#Partially deleted in new
chr12	51815042	51842106	chr12:51815042-51842106	3	+	51815042	51815042	8553170	5	90,86,126,179,714,	0,2904,8402,22823,26350,
#Partially deleted in new
chr12	51817839	51848766	chr12:51817839-51848766	3	-	51820451	51822413	789624	2	4585,227,	0,30700,
#Partially deleted in new
chr12	51817892	51831917	chr12:51817892-51831917	1	-	51820451	51822413	789624	2	4532,161,	0,13864,
#Deleted in new
chr12	51817898	51820150	chr12:51817898-51820150	3	+	51817898	51817898	8553170	2	1905,189,	0,2063,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	51823502	51835496	chr12:51823502-51835496	1	+	51823502	51823502	8553170	5	68,402,193,183,181,	0,607,2297,4784,11813,
#Partially deleted in new
chr12	51848222	51852729	chr12:51848222-51852729	3	+	51848222	51848222	789624	3	341,50,36,	0,2038,4471,
#Deleted in new
chr12	51887959	51891654	chr12:51887959-51891654	1	+	51888186	51891305	789624	5	372,251,130,111,1071,	0,608,1107,1412,2624,
#Deleted in new
chr12	51888008	51891354	chr12:51888008-51891354	0	+	51888186	51889386	789624	5	323,251,141,402,169,	0,559,1363,2575,3177,
#Deleted in new
chr12	51888011	51891354	chr12:51888011-51891354	0	+	51888011	51888011	8553170	5	807,126,141,402,169,	0,1059,1360,2572,3174,
#Deleted in new
chr12	51888102	51891657	chr12:51888102-51891657	0	+	51888102	51888102	8553170	2	229,3090,	0,465,
#Deleted in new
chr12	51888216	51891657	chr12:51888216-51891657	3	+	51889075	51891340	789624	6	115,251,126,141,402,472,	0,351,854,1155,2367,2969,
#Deleted in new
chr12	51888263	51891438	chr12:51888263-51891438	0	+	51888263	51888263	8553170	6	68,251,126,141,63,855,	0,304,807,1108,2163,2320,
#Deleted in new
chr12	51888579	51890758	chr12:51888579-51890758	0	+	51888579	51888579	8553170	3	239,111,175,	0,792,2004,
#Deleted in new
chr12	51890539	51891664	chr12:51890539-51891664	0	+	51890539	51890539	8553170	2	446,479,	0,646,
#Deleted in new
chr12	51900564	51901336	chr12:51900564-51901336	7	+	51900564	51900564	16724991	1	772,	0,
#Partially deleted in new
chr12	51906907	51913304	chr12:51906907-51913304	0	+	51912474	51913304	789624	4	86,199,66,206,	0,589,5562,6191,
#Partially deleted in new
chr12	51907417	51921069	chr12:51907417-51921069	3	+	51912474	51920893	0	10	278,66,252,212,100,147,276,198,131,311,	0,5052,5681,6141,6556,7021,7807,8618,11567,13341,
#Deleted in new
chr12	51912328	51914561	chr12:51912328-51914561	0	+	51912432	51914561	789624	3	207,252,123,	0,770,2110,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	51912331	51923359	chr12:51912331-51923359	1	+	51912432	51920893	789624	9	204,252,212,100,147,276,198,131,2601,	0,767,1227,1642,2107,2893,3704,6653,8427,
#Partially deleted in new
chr12	51912370	51921197	chr12:51912370-51921197	1	+	51912432	51920893	789624	6	165,147,276,198,131,439,	0,2068,2854,3665,6614,8388,
#Partially deleted in new
chr12	51915447	51919342	chr12:51915447-51919342	0	+	51915447	51919223	789624	3	53,198,358,	0,588,3537,
#Partially deleted in new
chr12	51915712	51919320	chr12:51915712-51919320	0	+	51915712	51915712	8553170	2	521,336,	0,3272,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	51921651	51923361	chr12:51921651-51923361	0	+	51921651	51921651	8553170	2	176,222,	0,1488,
#Partially deleted in new
chr12	51951666	51997078	chr12:51951666-51997078	3	+	51951743	51994110	789624	9	168,240,249,231,168,157,125,131,3094,	0,23598,24660,29302,32332,33525,35151,40196,42318,
#Partially deleted in new
chr12	51951700	51994217	chr12:51951700-51994217	1	+	51951743	51994110	789624	10	134,240,249,231,123,168,157,125,131,233,	0,23564,24626,29268,30985,32298,33491,35117,40162,42284,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	51951701	51992341	chr12:51951701-51992341	1	+	51951743	51992032	789624	8	133,240,249,231,168,157,125,479,	0,23563,24625,29267,32297,33490,35116,40161,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	51951705	51976364	chr12:51951705-51976364	0	+	51975329	51976364	789624	4	129,132,240,38,	0,8350,23559,24621,
#Partially deleted in new
chr12	51951743	51987346	chr12:51951743-51987346	1	+	51951743	51987145	789624	7	91,240,249,231,168,157,529,	0,23521,24583,29225,32255,33448,35074,
#Partially deleted in new
chr12	51953379	51994925	chr12:51953379-51994925	1	+	51975329	51994110	789624	9	120,240,249,231,168,157,125,131,941,	0,21885,22947,27589,30619,31812,33438,38483,40605,
#Partially deleted in new
chr12	51984034	51991992	chr12:51984034-51991992	0	+	51984034	51984034	8553170	3	132,157,130,	0,1157,7828,
#Partially deleted in new
chr12	52006939	52015864	chr12:52006939-52015864	3	+	52007019	52015199	0	8	326,50,55,103,94,67,67,1171,	0,2250,3941,4099,6747,6937,7195,7754,
#Partially deleted in new
chr12	52009187	52015889	chr12:52009187-52015889	0	+	52009187	52009187	8553170	7	52,55,103,94,67,67,1196,	0,1693,1851,4499,4689,4947,5506,
#Partially deleted in new
chr12	52010520	52015887	chr12:52010520-52015887	1	+	52011182	52015199	0	7	42,55,169,94,67,67,1194,	0,360,518,3166,3356,3614,4173,
#Partially deleted in new
chr12	52010526	52015065	chr12:52010526-52015065	0	+	52011077	52015065	789624	7	36,55,103,94,67,67,372,	0,354,512,3160,3350,3608,4167,
#Deleted in new
chr12	52010910	52011351	chr12:52010910-52011351	0	+	52010910	52010910	8553170	2	25,313,	0,128,
#Partially deleted in new
chr12	52011073	52013897	chr12:52011073-52013897	0	+	52011073	52011073	8553170	2	68,211,	0,2613,
#Deleted in new
chr12	52013495	52015182	chr12:52013495-52015182	0	+	52013495	52013495	8553170	4	285,67,67,489,	0,381,639,1198,
#Deleted in new
chr12	52013678	52014531	chr12:52013678-52014531	0	+	52013678	52013678	8553170	2	265,397,	0,456,
#Partially deleted in new
chr12	52022831	52059506	chr12:52022831-52059506	1	+	52041892	52058944	0	8	108,120,878,130,152,203,179,819,	0,18978,31495,33198,33662,34225,34520,35856,
#Partially deleted in new
chr12	52022831	52054646	chr12:52022831-52054646	0	+	52041892	52054646	789624	3	108,120,320,	0,18978,31495,
#Partially deleted in new
chr12	52037176	52055197	chr12:52037176-52055197	0	+	52041892	52055197	789624	3	267,120,871,	0,4633,17150,
#Partially deleted in new
chr12	52037241	52045568	chr12:52037241-52045568	0	+	52041892	52045568	789624	4	202,120,110,89,	0,4568,6560,8238,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	52037714	52059501	chr12:52037714-52059501	1	+	52038709	52058944	789624	8	1035,120,878,130,152,203,179,814,	0,4095,16612,18315,18779,19342,19637,20973,
#Partially deleted in new
chr12	52041804	52059049	chr12:52041804-52059049	1	+	52041892	52058944	0	7	125,878,130,152,203,179,362,	0,12522,14225,14689,15252,15547,16883,
#Partially deleted in new
chr12	52043424	52054439	chr12:52043424-52054439	0	+	52043424	52043424	8553170	2	487,113,	0,10902,
#Partially deleted in new
chr12	52043726	52055961	chr12:52043726-52055961	0	+	52043726	52043726	8553170	2	185,1635,	0,10600,
#Partially deleted in new
chr12	52043838	52054673	chr12:52043838-52054673	0	+	52043838	52043838	8553170	3	73,150,347,	0,8657,10488,
#Partially deleted in new
chr12	52051401	52059506	chr12:52051401-52059506	1	+	52054328	52058944	0	8	167,150,878,130,152,203,179,819,	0,1094,2925,4628,5092,5655,5950,7286,
#Partially deleted in new
chr12	52051401	52059506	chr12:52051401-52059506	3	+	52054328	52058944	0	7	167,878,130,152,203,179,819,	0,2925,4628,5092,5655,5950,7286,
#Partially deleted in new
chr12	52051441	52059507	chr12:52051441-52059507	1	+	52054328	52058944	0	8	131,146,878,130,152,203,179,820,	0,1058,2885,4588,5052,5615,5910,7246,
#Deleted in new
chr12	52051441	52056151	chr12:52051441-52056151	0	+	52054328	52056151	789624	3	127,325,122,	0,2885,4588,
#Deleted in new
chr12	52051447	52055306	chr12:52051447-52055306	1	+	52054328	52055306	0	2	121,980,	0,2879,
#Deleted in new
chr12	52051458	52054882	chr12:52051458-52054882	0	+	52054430	52054882	789624	3	110,172,556,	0,1015,2868,
#Deleted in new
chr12	52051462	52057425	chr12:52051462-52057425	0	+	52051462	52051462	8553170	4	106,152,203,74,	0,5031,5594,5889,
#Partially deleted in new
chr12	52053417	52059503	chr12:52053417-52059503	0	+	52053417	52053417	8553170	3	3842,179,816,	0,3934,5270,
#Deleted in new
chr12	52055720	52056804	chr12:52055720-52056804	0	+	52055720	52055720	8553170	2	441,311,	0,773,
#Deleted in new
chr12	52056021	52056855	chr12:52056021-52056855	0	+	52056021	52056021	8553170	2	138,362,	0,472,
#Deleted in new
chr12	52056144	52057139	chr12:52056144-52057139	0	+	52056144	52056144	8553170	2	118,494,	0,501,
#Partially deleted in new
chr12	52056603	52058703	chr12:52056603-52058703	0	+	52057093	52058703	789624	4	42,370,179,16,	0,286,748,2084,
#Deleted in new
chr12	52056688	52057471	chr12:52056688-52057471	0	+	52056688	52056688	8553170	2	571,120,	0,663,
#Deleted in new
chr12	52058458	52059332	chr12:52058458-52059332	3	-	52058458	52058458	8553170	2	161,381,	0,493,
#Deleted in new
chr12	52058749	52059503	chr12:52058749-52059503	1	-	52058749	52058749	8553170	2	284,403,	0,351,
#Deleted in new
chr12	52069245	52070415	chr12:52069245-52070415	0	+	52069245	52069245	8553170	2	697,62,	0,1108,
#Partially deleted in new
chr12	52069970	52077494	chr12:52069970-52077494	3	+	52073650	52077190	0	4	272,130,328,709,	0,383,3604,6815,
#Partially deleted in new
chr12	52069975	52073903	chr12:52069975-52073903	0	+	52069975	52069975	8553170	2	508,329,	0,3599,
#Partially deleted in new
chr12	52069986	52073903	chr12:52069986-52073903	0	+	52073650	52073903	789624	2	342,329,	0,3588,
#Partially deleted in new
chr12	52070002	52077104	chr12:52070002-52077104	0	+	52073650	52077104	789624	4	69,130,328,319,	0,351,3572,6783,
#Deleted in new
chr12	52070011	52071434	chr12:52070011-52071434	0	+	52070011	52070011	8553170	2	231,1081,	0,342,
#Partially deleted in new
chr12	52070019	52076956	chr12:52070019-52076956	0	+	52073650	52076956	789624	4	29,130,328,171,	0,334,3555,6766,
#Deleted in new
chr12	52076840	52082084	chr12:52076840-52082084	3	-	52076840	52076840	8553170	2	614,33,	0,5211,
#Partially deleted in new
chr12	52079695	52108239	chr12:52079695-52108239	3	+	52079779	52080061	789624	3	486,75,861,	0,4198,27683,
#Partially deleted in new
chr12	52084743	52092285	chr12:52084743-52092285	7	+	52084743	52084743	16724991	3	86,97,266,	0,2844,7276,
#Partially deleted in new
chr12	52084774	52107550	chr12:52084774-52107550	4	+	52084774	52084774	16724991	2	66,164,	0,22612,
#Partially deleted in new
chr12	52092484	52104297	chr12:52092484-52104297	3	-	52092484	52092484	8553170	3	199,174,139,	0,2194,11674,
#Partially deleted in new
chr12	52093568	52108250	chr12:52093568-52108250	4	+	52093568	52093568	16724991	2	61,872,	0,13810,
#Deleted in new
chr12	52107277	52108261	chr12:52107277-52108261	5	+	52107277	52107277	16724991	1	984,	0,
#Partially deleted in new
chr12	52164114	52223800	chr12:52164114-52223800	3	+	52164114	52164114	8553170	3	262,151,355,	0,686,59331,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	52168995	52192000	chr12:52168995-52192000	1	-	52171522	52191902	789624	9	2562,56,221,126,165,96,61,209,398,	0,2662,3202,4042,4604,11517,11907,16383,22607,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	52168995	52192000	chr12:52168995-52192000	3	-	52171397	52191902	789624	9	2527,56,221,126,165,96,61,209,398,	0,2662,3202,4042,4604,11517,11907,16383,22607,
#Partially deleted in new
chr12	52169522	52185749	chr12:52169522-52185749	0	-	52169522	52169522	8553170	7	2000,56,221,126,165,451,371,	0,2135,2675,3515,4077,10990,15856,
#Partially deleted in new
chr12	52205555	52213583	chr12:52205555-52213583	2	-	52205555	52205555	8553170	4	624,349,179,68,	0,5021,6986,7960,
#Partially deleted in new
chr12	52205583	52210823	chr12:52205583-52210823	1	-	52205583	52205583	8553170	4	596,130,284,247,	0,930,2521,4993,
#Deleted in new
chr12	52205784	52208402	chr12:52205784-52208402	0	-	52205784	52205784	8553170	3	395,130,298,	0,729,2320,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	52209748	52210855	chr12:52209748-52210855	0	-	52209748	52209748	8553170	2	292,279,	0,828,
#Partially deleted in new
chr12	52210929	52223804	chr12:52210929-52223804	1	+	52210929	52210929	789624	5	91,113,429,52,359,	0,1114,1669,11047,12516,
#Deleted in new
chr12	52229092	52229588	chr12:52229092-52229588	7	-	52229092	52229092	16724991	1	496,	0,
#Deleted in new
chr12	52232519	52233148	chr12:52232519-52233148	0	+	52232519	52232519	8553170	2	272,108,	0,521,
#Deleted in new
chr12	52232664	52233440	chr12:52232664-52233440	0	+	52232664	52232664	8553170	2	127,165,	0,611,
#Partially deleted in new
chr12	52233113	52248921	chr12:52233113-52248921	3	+	52233296	52248760	0	9	507,212,61,96,165,126,221,35,331,	0,2041,4395,5566,8358,9898,12298,15063,15477,
#Partially deleted in new
chr12	52233591	52241508	chr12:52233591-52241508	0	+	52233591	52233591	8553170	5	29,212,209,96,37,	0,1563,3917,5088,7880,
#Partially deleted in new
chr12	52238687	52241971	chr12:52238687-52241971	0	+	52238687	52238687	8553170	2	88,500,	0,2784,
#Partially deleted in new
chr12	52238704	52245448	chr12:52238704-52245448	1	+	52238706	52245448	789624	5	71,165,126,27,9,	0,2767,4307,6707,6735,
#Partially deleted in new
chr12	52238718	52243541	chr12:52238718-52243541	0	+	52238718	52238718	8553170	4	57,165,126,238,	0,2753,4293,4585,
#Partially deleted in new
chr12	52241527	52244577	chr12:52241527-52244577	0	+	52241527	52241527	8553170	3	109,126,206,	0,1484,2844,
#Partially deleted in new
chr12	52241544	52243411	chr12:52241544-52243411	0	+	52241544	52241544	8553170	2	92,400,	0,1467,
#Partially deleted in new
chr12	52243084	52248688	chr12:52243084-52248688	0	+	52243084	52243084	8553170	4	53,143,35,98,	0,2405,5092,5506,
#Partially deleted in new
chr12	52244377	52248855	chr12:52244377-52248855	0	+	52244377	52244377	8553170	4	234,282,35,265,	0,973,3799,4213,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	52245047	52247448	chr12:52245047-52247448	3	-	52245047	52245047	789624	2	1421,272,	0,2129,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	52245438	52252186	chr12:52245438-52252186	0	+	52245438	52245438	8553170	3	194,35,410,	0,2738,6338,
#Deleted in new
chr12	52247657	52248921	chr12:52247657-52248921	0	+	52247657	52247657	8553170	3	133,35,331,	0,519,933,
#Deleted in new
chr12	52247917	52248925	chr12:52247917-52248925	0	+	52247917	52247917	8553170	2	294,335,	0,673,
#Partially deleted in new
chr12	52249299	52303159	chr12:52249299-52303159	0	+	52301916	52303159	789624	3	129,373,60,	0,52613,53800,
#Partially deleted in new
chr12	52250465	52258553	chr12:52250465-52258553	5	-	52250465	52250465	16724991	9	176,32,220,126,165,96,61,204,384,	0,1561,1796,2747,3135,3803,4884,5573,7704,
#Partially deleted in new
chr12	52250543	52258867	chr12:52250543-52258867	7	-	52250543	52250543	16724991	9	98,32,220,126,165,96,61,204,698,	0,1483,1718,2669,3057,3725,4806,5495,7626,
#Partially deleted in new
chr12	52263947	52267461	chr12:52263947-52267461	7	+	52263947	52263947	16724991	4	294,157,117,117,	0,2598,3015,3397,
#Partially deleted in new
chr12	52274646	52279156	chr12:52274646-52279156	3	-	52274646	52274646	8553170	2	431,216,	0,4294,
#Partially deleted in new
chr12	52274674	52309163	chr12:52274674-52309163	3	+	52301916	52308585	789624	11	48,126,373,209,61,96,165,126,221,32,760,	0,1146,27238,28425,29436,30257,30565,30988,31385,33558,33729,
#Partially deleted in new
chr12	52275820	52277736	chr12:52275820-52277736	7	+	52275820	52275820	16724991	2	126,197,	0,1719,
#Deleted in new
chr12	52285912	52291534	chr12:52285912-52291534	3	-	52286254	52291465	789624	9	581,32,221,126,165,96,61,209,438,	0,878,1189,1683,2071,2448,3302,4165,5184,
#Deleted in new
chr12	52286254	52291515	chr12:52286254-52291515	1	-	52286254	52291465	789624	10	36,140,32,221,126,165,96,61,209,419,	0,99,536,847,1341,1729,2106,2960,3823,4842,
#Deleted in new
chr12	52301864	52309163	chr12:52301864-52309163	1	+	52301916	52308585	789624	9	421,209,61,96,165,126,221,32,760,	0,1235,2246,3067,3375,3798,4195,6368,6539,
#Deleted in new
chr12	52306615	52308371	chr12:52306615-52308371	3	-	52306615	52306615	8553170	2	463,161,	0,1595,
#Partially deleted in new
chr12	52314300	52321398	chr12:52314300-52321398	3	-	52314630	52321335	789624	9	518,32,221,126,165,96,61,209,447,	0,1011,1592,2167,2558,3380,3609,4855,6651,
#Partially deleted in new
chr12	52341196	52354036	chr12:52341196-52354036	7	+	52341196	52341196	16724991	9	420,209,61,95,165,126,221,36,145,	0,3024,4975,6066,6804,7190,8916,11924,12695,
#Partially deleted in new
chr12	52344218	52348178	chr12:52344218-52348178	4	+	52344218	52344218	16724991	4	211,61,95,178,	0,1953,3044,3782,
#Partially deleted in new
chr12	52360005	52367481	chr12:52360005-52367481	3	-	52360852	52367405	789624	9	1041,32,221,126,165,96,61,209,496,	0,1461,2245,2848,3240,4062,4300,4956,6980,
#Partially deleted in new
chr12	52360555	52364622	chr12:52360555-52364622	1	-	52360852	52364420	789624	7	491,32,221,126,165,96,256,	0,911,1695,2298,2690,3512,3811,
#Partially deleted in new
chr12	52362850	52364629	chr12:52362850-52364629	0	-	52362850	52362850	8553170	4	129,165,96,324,	0,395,1217,1455,
#Deleted in new
chr12	52377811	52385652	chr12:52377811-52385652	3	-	52378033	52385585	789624	9	569,32,221,126,165,96,61,209,613,	0,2064,2551,3268,3549,4625,5193,5778,7228,
#Partially deleted in new
chr12	52380459	52402407	chr12:52380459-52402407	3	+	52380459	52380459	8553170	2	146,416,	0,21532,
#Partially deleted in new
chr12	52393930	52406355	chr12:52393930-52406355	3	-	52394974	52406277	789624	9	1265,32,221,126,165,96,61,209,489,	0,1828,2081,2952,6054,6596,7358,9770,11936,
#Partially deleted in new
chr12	52407579	52428494	chr12:52407579-52428494	3	+	52407579	52407579	8553170	3	82,209,338,	0,4780,20577,
#Partially deleted in new
chr12	52411741	52421867	chr12:52411741-52421867	7	-	52411741	52411741	16724991	7	197,32,215,253,96,62,209,	0,1612,2219,3241,6609,7342,9917,
#Partially deleted in new
chr12	52424069	52434525	chr12:52424069-52434525	3	-	52424516	52434304	789624	9	686,35,221,126,165,96,61,215,719,	0,2747,4186,4548,6471,7473,7936,8968,9737,
#Deleted in new
chr12	52446650	52452126	chr12:52446650-52452126	3	-	52447189	52452078	789624	9	775,35,221,126,165,96,61,215,588,	0,888,1127,2191,2818,3107,3361,3755,4888,
#Deleted in new
chr12	52468515	52473785	chr12:52468515-52473785	3	-	52469061	52473737	789624	9	782,35,221,126,165,96,61,215,588,	0,895,1154,1989,2616,2905,3156,3550,4682,
#Deleted in new
chr12	52470021	52471433	chr12:52470021-52471433	0	-	52470021	52470021	8553170	2	609,302,	0,1110,
#Partially deleted in new
chr12	52487173	52493257	chr12:52487173-52493257	3	-	52487719	52493188	0	9	782,35,221,126,165,96,61,215,609,	0,895,1154,2769,3395,3684,3938,4348,5475,
#Deleted in new
chr12	52489895	52490622	chr12:52489895-52490622	0	-	52489895	52489895	8553170	2	173,54,	0,673,
#Deleted in new
chr12	52489976	52492709	chr12:52489976-52492709	0	-	52489976	52489976	8553170	5	92,385,61,215,61,	0,592,1135,1545,2672,
#Deleted in new
chr12	52490034	52491157	chr12:52490034-52491157	0	-	52490034	52490034	8553170	3	34,165,300,	0,534,823,
#Deleted in new
chr12	52490279	52491625	chr12:52490279-52491625	0	-	52490279	52490279	8553170	4	454,96,61,104,	0,578,832,1242,
#Deleted in new
chr12	52514574	52520687	chr12:52514574-52520687	3	-	52514941	52520296	0	9	666,35,221,126,165,96,61,215,946,	0,1223,2062,2532,3015,3322,3528,4371,5167,
#Deleted in new
chr12	52514995	52516196	chr12:52514995-52516196	0	-	52514995	52514995	8553170	2	245,399,	0,802,
#Deleted in new
chr12	52515112	52517888	chr12:52515112-52517888	0	-	52515112	52515112	8553170	5	128,35,221,126,299,	0,685,1524,1994,2477,
#Deleted in new
chr12	52515457	52517945	chr12:52515457-52517945	0	-	52515789	52517945	789624	5	375,221,126,165,49,	0,1179,1649,2132,2439,
#Deleted in new
chr12	52516127	52520394	chr12:52516127-52520394	0	-	52516127	52516127	8553170	7	730,126,165,96,61,215,653,	0,979,1462,1769,1975,2818,3614,
#Deleted in new
chr12	52516689	52517952	chr12:52516689-52517952	0	-	52516689	52516689	8553170	3	543,165,56,	0,900,1207,
#Deleted in new
chr12	52517156	52519617	chr12:52517156-52519617	0	-	52517156	52517156	8553170	5	76,165,267,215,83,	0,433,740,1789,2378,
#Deleted in new
chr12	52517180	52519117	chr12:52517180-52519117	0	-	52517180	52519117	789624	6	52,165,96,61,41,172,	0,409,716,922,1272,1765,
#Deleted in new
chr12	52517957	52520371	chr12:52517957-52520371	0	-	52517957	52520296	789624	5	35,61,215,182,118,	0,145,988,1784,2296,
#Deleted in new
chr12	52519750	52520394	chr12:52519750-52520394	0	-	52519750	52520296	789624	2	269,270,	0,374,
#Deleted in new
chr12	52519900	52520530	chr12:52519900-52520530	0	-	52519900	52520296	789624	2	408,134,	0,496,
#Partially deleted in new
chr12	52543908	52553147	chr12:52543908-52553147	3	-	52544531	52553077	789624	9	835,35,221,126,165,96,61,215,511,	0,1656,2377,3948,4243,4792,5384,6120,8728,
#Deleted in new
chr12	52565781	52573816	chr12:52565781-52573816	1	-	52566968	52573777	789624	10	1387,35,221,42,126,165,96,61,215,510,	0,1877,2387,3708,4077,4887,5577,6162,6671,7525,
#Deleted in new
chr12	52565818	52573825	chr12:52565818-52573825	3	-	52566968	52573777	789624	9	1350,35,221,126,165,96,61,215,519,	0,1840,2350,4040,4850,5540,6125,6634,7488,
#Deleted in new
chr12	52566998	52568510	chr12:52566998-52568510	0	-	52566998	52566998	8553170	3	170,35,342,	0,660,1170,
#Partially deleted in new
chr12	52585588	52601538	chr12:52585588-52601538	3	-	52585981	52601452	789624	9	584,35,221,126,165,96,61,215,512,	0,1357,2042,5247,5875,6807,7303,13309,15438,
#Partially deleted in new
chr12	52585588	52601463	chr12:52585588-52601463	1	-	52585981	52601452	789624	10	247,210,35,221,126,165,96,61,215,437,	0,374,1357,2042,5247,5875,6807,7303,13309,15438,
#Partially deleted in new
chr12	52585713	52601538	chr12:52585713-52601538	1	-	52585981	52601452	789624	8	459,35,221,165,96,61,215,512,	0,1232,1917,5750,6682,7178,13184,15313,
#Partially deleted in new
chr12	52585957	52601432	chr12:52585957-52601432	0	-	52599385	52601432	789624	10	215,35,221,126,165,96,61,215,139,406,	0,988,1673,4878,5506,6438,6934,12940,13313,15069,
#Partially deleted in new
chr12	52598953	52601409	chr12:52598953-52601409	0	-	52598953	52601409	789624	3	159,32,383,	0,317,2073,
#Partially deleted in new
chr12	52601466	52613605	chr12:52601466-52613605	3	+	52601466	52601466	8553170	4	101,140,95,227,	0,9821,11268,11912,
#Partially deleted in new
chr12	52607569	52618559	chr12:52607569-52618559	3	-	52608195	52618524	789624	9	883,35,221,126,165,96,61,215,482,	0,1677,3045,3634,6118,7009,7709,8596,10508,
#Partially deleted in new
chr12	52607735	52618549	chr12:52607735-52618549	0	-	52607735	52607735	8553170	8	717,35,715,165,96,61,215,472,	0,1511,2879,5952,6843,7543,8430,10342,
#Partially deleted in new
chr12	52608136	52615332	chr12:52608136-52615332	0	-	52608195	52615332	789624	6	316,35,221,126,165,54,	0,1110,2478,3067,5551,7142,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	52609850	52615305	chr12:52609850-52615305	1	+	52609850	52609850	789624	3	1577,489,1742,	0,2490,3713,
#Deleted in new
chr12	52611287	52614062	chr12:52611287-52614062	0	+	52611287	52611287	8553170	3	140,95,499,	0,1447,2276,
#Partially deleted in new
chr12	52632865	52634456	chr12:52632865-52634456	7	-	52632865	52632865	16724991	3	58,240,365,	0,596,1226,
#Deleted in new
chr12	52644557	52652164	chr12:52644557-52652164	3	-	52645018	52652142	789624	9	877,35,221,126,165,96,61,215,607,	0,977,2182,3172,3615,4449,5356,5781,7000,
#Deleted in new
chr12	52648207	52650672	chr12:52648207-52650672	0	-	52648207	52648207	8553170	4	130,96,61,334,	0,799,1706,2131,
#Deleted in new
chr12	52674735	52680407	chr12:52674735-52680407	3	-	52675192	52680348	0	9	882,35,221,126,165,96,61,215,650,	0,974,1539,2323,2580,2914,3427,3806,5022,
#Deleted in new
chr12	52675722	52677517	chr12:52675722-52677517	0	-	52675722	52675722	8553170	4	22,221,126,202,	0,552,1336,1593,
#Partially deleted in new
chr12	52689625	52703463	chr12:52689625-52703463	3	-	52691164	52703434	789624	9	1814,35,221,126,165,96,61,215,572,	0,2312,2795,3129,5000,6146,6744,8056,13266,
#Partially deleted in new
chr12	52690803	52703463	chr12:52690803-52703463	0	-	52697777	52703434	789624	10	636,35,221,126,165,96,61,215,85,572,	0,1134,1617,1951,3822,4968,5566,6878,7372,12088,
#Partially deleted in new
chr12	52692604	52696788	chr12:52692604-52696788	3	+	52692604	52692604	8553170	3	193,158,410,	0,904,3774,
#Partially deleted in new
chr12	52692827	52695352	chr12:52692827-52695352	0	-	52692827	52692827	8553170	2	53,727,	0,1798,
#Partially deleted in new
chr12	52715566	52721655	chr12:52715566-52721655	7	-	52715566	52715566	16724991	6	231,126,165,96,72,491,	0,898,2100,2605,3402,5598,
#Partially deleted in new
chr12	52729516	52736142	chr12:52729516-52736142	7	-	52729516	52729516	16724991	4	123,132,216,518,	0,579,5749,6108,
#Deleted in new
chr12	52730424	52732865	chr12:52730424-52732865	7	+	52730424	52730424	16724991	1	2441,	0,
#Partially deleted in new
chr12	52746595	52748308	chr12:52746595-52748308	7	-	52746595	52746595	16724991	3	222,126,147,	0,757,1566,
#Deleted in new
chr12	52748775	52750127	chr12:52748775-52750127	7	+	52748775	52748775	16724991	1	1352,	0,
#Partially deleted in new
chr12	52751977	52753821	chr12:52751977-52753821	7	-	52751977	52751977	16724991	3	61,213,159,	0,1330,1685,
#Deleted in new
chr12	52763404	52763893	chr12:52763404-52763893	7	+	52763404	52763404	16724991	1	489,	0,
#Partially deleted in new
chr12	52768154	52777345	chr12:52768154-52777345	3	-	52768712	52777291	789624	9	956,35,221,126,165,96,61,215,654,	0,1394,2844,3716,3939,4628,5427,7233,8537,
#Deleted in new
chr12	52782649	52782839	chr12:52782649-52782839	7	+	52782649	52782649	16724991	1	190,	0,
#Partially deleted in new
chr12	52789684	52796117	chr12:52789684-52796117	3	-	52790041	52796042	789624	9	674,35,221,126,165,96,61,221,720,	0,1153,1521,2006,2554,3026,3478,4426,5713,
#Partially deleted in new
chr12	52806548	52814551	chr12:52806548-52814551	3	-	52807068	52814058	789624	9	702,35,221,126,165,96,61,215,955,	0,810,1095,1745,2137,2834,4207,5214,7048,
#Partially deleted in new
chr12	52806599	52814116	chr12:52806599-52814116	0	-	52811951	52814058	789624	9	651,35,221,126,165,96,61,215,269,	0,759,1044,1694,2086,2783,4156,5163,7248,
#Partially deleted in new
chr12	52809074	52810927	chr12:52809074-52810927	0	-	52809074	52809074	8553170	2	404,172,	0,1681,
#Partially deleted in new
chr12	52809382	52814116	chr12:52809382-52814116	0	-	52813678	52814058	789624	4	96,61,132,269,	0,1373,4214,4465,
#Deleted in new
chr12	52811445	52813616	chr12:52811445-52813616	0	-	52811445	52811445	8553170	2	532,20,	0,2151,
#Partially deleted in new
chr12	52821409	52830462	chr12:52821409-52830462	0	-	52821409	52821409	8553170	7	668,35,221,126,165,96,231,	0,935,1606,2477,2788,8613,8822,
#Partially deleted in new
chr12	52821446	52834295	chr12:52821446-52834295	3	-	52821871	52834260	789624	9	631,35,221,126,165,96,61,221,512,	0,898,1569,2440,2751,8576,8785,9959,12337,
#Deleted in new
chr12	52821743	52823140	chr12:52821743-52823140	0	-	52822144	52823140	789624	2	636,125,	0,1272,
#Deleted in new
chr12	52837402	52837739	chr12:52837402-52837739	7	+	52837402	52837402	16724991	1	337,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	52837803	52848283	chr12:52837803-52848283	1	-	52839112	52848271	789624	9	1569,35,221,126,165,96,61,215,66,	0,1649,1960,6289,6755,8393,8960,10103,10414,
#Partially deleted in new
chr12	52838961	52848994	chr12:52838961-52848994	3	-	52839112	52848930	789624	9	411,35,221,126,165,96,61,215,448,	0,491,802,5131,5597,7235,7802,8945,9585,
#Deleted in new
chr12	52838965	52839814	chr12:52838965-52839814	0	-	52839299	52839814	789624	2	407,51,	0,798,
#Partially deleted in new
chr12	52844603	52849092	chr12:52844603-52849092	0	-	52844603	52844603	8553170	6	120,96,61,215,75,57,	0,1593,2160,3303,3943,4432,
#Partially deleted in new
chr12	52845995	52847953	chr12:52845995-52847953	0	-	52845995	52845995	8553170	3	297,61,47,	0,768,1911,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	52885428	52886385	chr12:52885428-52886385	7	+	52885428	52885428	16724991	1	957,	0,
#Partially deleted in new
chr12	52897186	52949842	chr12:52897186-52949842	3	-	52897427	52904981	789624	9	432,59,221,291,96,61,209,370,387,	0,1274,1492,2588,3401,3972,4677,7471,52269,
#Partially deleted in new
chr12	52897193	52906618	chr12:52897193-52906618	1	-	52897427	52904981	789624	9	425,59,221,291,96,61,209,422,98,	0,1267,1485,2581,3394,3965,4670,7464,9327,
#Partially deleted in new
chr12	52897207	52905052	chr12:52897207-52905052	0	-	52897207	52897207	8553170	6	411,59,221,291,1485,395,	0,1253,1471,2567,3380,7450,
#Partially deleted in new
chr12	52897215	52905044	chr12:52897215-52905044	0	-	52897215	52897215	8553170	7	403,59,221,291,632,209,387,	0,1245,1463,2559,3372,4648,7442,
#Partially deleted in new
chr12	52897280	52949824	chr12:52897280-52949824	1	-	52897427	52904981	789624	9	338,59,221,291,96,61,209,370,110,	0,1180,1398,2494,3307,3878,4583,7377,52434,
#Partially deleted in new
chr12	52897296	52926469	chr12:52897296-52926469	1	-	52897427	52926449	789624	9	322,59,221,291,96,61,209,370,58,	0,1164,1382,2478,3291,3862,4567,7361,29115,
#Partially deleted in new
chr12	52898468	52901867	chr12:52898468-52901867	0	-	52898468	52898468	8553170	5	431,291,96,61,4,	0,1306,2119,2690,3395,
#Deleted in new
chr12	52899793	52902204	chr12:52899793-52902204	0	-	52899793	52899793	8553170	4	272,96,61,341,	0,794,1365,2070,
#Partially deleted in new
chr12	52899934	52949882	chr12:52899934-52949882	0	-	52899934	52904981	789624	7	131,96,61,209,370,130,168,	0,653,1224,1929,4723,49521,49780,
#Deleted in new
chr12	52899995	52901947	chr12:52899995-52901947	0	-	52900661	52901947	789624	3	70,96,84,	0,592,1868,
#Partially deleted in new
chr12	52900007	52949776	chr12:52900007-52949776	0	-	52900007	52949726	789624	7	58,96,61,209,370,62,62,	0,580,1151,1856,4650,49448,49707,
#Partially deleted in new
chr12	52900587	52903648	chr12:52900587-52903648	0	-	52900587	52902045	789624	4	96,61,209,157,	0,571,1276,2904,
#Partially deleted in new
chr12	52904675	52907060	chr12:52904675-52907060	0	-	52904675	52906835	789624	2	352,413,	0,1972,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	52946613	52949874	chr12:52946613-52949874	1	-	52948803	52949726	789624	3	2215,62,160,	0,2842,3101,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	52948483	52949831	chr12:52948483-52949831	0	-	52948483	52948483	8553170	3	345,130,117,	0,972,1231,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	52948650	52949920	chr12:52948650-52949920	0	-	52948650	52948650	8553170	3	178,123,206,	0,805,1064,
#Deleted in new
chr12	52948870	52952900	chr12:52948870-52952900	3	+	52949173	52952842	789624	8	68,418,83,157,165,126,224,179,	0,302,1457,1879,2610,2860,3248,3851,
#Deleted in new
chr12	52948885	52952812	chr12:52948885-52952812	1	+	52949173	52952346	789624	7	53,418,83,157,165,126,694,	0,287,1442,1864,2595,2845,3233,
#Deleted in new
chr12	52948963	52952901	chr12:52948963-52952901	1	+	52949173	52952842	789624	7	627,83,157,165,126,224,180,	0,1364,1786,2517,2767,3155,3758,
#Deleted in new
chr12	52949126	52952872	chr12:52949126-52952872	0	+	52949126	52949126	8553170	5	464,579,165,126,754,	0,1201,2354,2604,2992,
#Deleted in new
chr12	52949215	52949954	chr12:52949215-52949954	0	-	52949215	52949215	8553170	2	302,240,	0,499,
#Deleted in new
chr12	52949804	52951645	chr12:52949804-52951645	0	+	52949804	52949804	8553170	3	606,157,165,	0,945,1676,
#Deleted in new
chr12	52951495	52952278	chr12:52951495-52952278	0	+	52951495	52951495	8553170	2	361,160,	0,623,
#Deleted in new
chr12	52951741	52952815	chr12:52951741-52952815	0	+	52951741	52951741	8553170	2	601,94,	0,980,
#Partially deleted in new
chr12	53006157	53042209	chr12:53006157-53042209	3	+	53006483	53040223	0	15	339,138,209,117,55,135,138,174,229,98,214,56,106,73,2067,	0,10315,12640,13752,15648,16335,21624,21857,27648,28454,31251,32198,33080,33472,33985,
#Partially deleted in new
chr12	53006281	53021758	chr12:53006281-53021758	0	+	53006281	53006281	8553170	6	215,47,138,209,117,43,	0,2315,10191,12516,13628,15434,
#Partially deleted in new
chr12	53006430	53027856	chr12:53006430-53027856	0	+	53006483	53021766	789624	7	66,138,209,117,145,135,75,	0,10042,12367,13479,15285,16062,21351,
#Partially deleted in new
chr12	53006447	53021835	chr12:53006447-53021835	0	+	53006447	53006447	8553170	6	49,47,138,209,117,30,	0,2149,10025,12350,13462,15358,
#Partially deleted in new
chr12	53006455	53040280	chr12:53006455-53040280	1	+	53006483	53040223	789624	15	41,138,209,117,55,135,138,174,229,113,214,56,106,73,138,	0,10017,12342,13454,15350,16037,21326,21559,27350,28156,30953,31900,32782,33174,33687,
#Partially deleted in new
chr12	53006455	53022607	chr12:53006455-53022607	0	+	53006483	53022607	789624	5	41,209,117,55,115,	0,12342,13454,15350,16037,
#Partially deleted in new
chr12	53006456	53040462	chr12:53006456-53040462	1	+	53006483	53040223	0	14	40,138,209,55,135,138,174,229,98,214,56,106,73,320,	0,10016,12341,15349,16036,21325,21558,27349,28155,30952,31899,32781,33173,33686,
#Partially deleted in new
chr12	53006458	53037434	chr12:53006458-53037434	0	+	53006483	53025243	789624	12	38,138,209,117,55,135,119,138,174,229,98,26,	0,10014,12339,13451,15347,16034,18768,21323,21556,27347,28153,30950,
#Partially deleted in new
chr12	53006467	53034619	chr12:53006467-53034619	0	+	53006483	53034619	789624	9	29,138,209,117,55,138,174,229,8,	0,10005,12330,13442,15338,21314,21547,27338,28144,
#Partially deleted in new
chr12	53006468	53028173	chr12:53006468-53028173	0	+	53006483	53028173	789624	7	28,138,209,117,55,135,159,	0,10004,12329,13441,15337,16024,21546,
#Partially deleted in new
chr12	53006483	53027872	chr12:53006483-53027872	0	+	53006483	53022279	789624	8	13,138,209,117,55,113,135,91,	0,9989,12314,13426,15322,15770,16009,21298,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	53012103	53013921	chr12:53012103-53013921	3	+	53012103	53012103	8553170	2	170,366,	0,1452,
#Partially deleted in new
chr12	53014595	53018959	chr12:53014595-53018959	0	-	53014595	53014595	8553170	2	348,181,	0,4183,
#Partially deleted in new
chr12	53014628	53046959	chr12:53014628-53046959	0	-	53014628	53014628	8553170	3	315,101,107,	0,31332,32224,
#Partially deleted in new
chr12	53018859	53021916	chr12:53018859-53021916	0	+	53018859	53018859	8553170	3	147,117,201,	0,1050,2856,
#Partially deleted in new
chr12	53034645	53037724	chr12:53034645-53037724	0	+	53034645	53034645	8553170	2	64,316,	0,2763,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	53037725	53040352	chr12:53037725-53040352	0	+	53037725	53037725	8553170	3	1618,73,210,	0,1904,2417,
#Partially deleted in new
chr12	53038966	53047050	chr12:53038966-53047050	1	-	53038966	53038966	8553170	4	1297,54,101,198,	0,6633,6994,7886,
#Partially deleted in new
chr12	53039717	53054384	chr12:53039717-53054384	0	-	53039717	53039717	8553170	3	546,101,64,	0,6243,14603,
#Partially deleted in new
chr12	53042704	53046003	chr12:53042704-53046003	1	-	53042704	53042704	8553170	4	443,122,54,43,	0,2360,2895,3256,
#Partially deleted in new
chr12	53042884	53046061	chr12:53042884-53046061	0	-	53042884	53042884	8553170	2	263,101,	0,3076,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	53043188	53054438	chr12:53043188-53054438	3	-	53043188	53043188	5263520	4	2465,101,179,118,	0,2772,10207,11132,
#Partially deleted in new
chr12	53046968	53064369	chr12:53046968-53064369	1	+	53054291	53063882	0	29	95,109,38,39,39,50,172,51,123,65,84,113,61,76,130,66,114,1212,151,590,90,126,93,78,78,169,69,30,626,	0,4886,5486,6442,6805,6996,7301,8217,8599,8812,10044,10598,10804,11058,11347,11603,11745,12078,13436,13706,14411,14846,15184,15407,15651,16120,16380,16594,16775,
#Partially deleted in new
chr12	53048948	53064371	chr12:53048948-53064371	3	+	53049143	53063882	0	29	300,109,38,39,39,50,172,51,123,65,84,113,61,76,130,66,114,1212,151,590,90,126,93,78,78,169,69,30,628,	0,2906,3506,4462,4825,5016,5321,6237,6619,6832,8064,8618,8824,9078,9367,9623,9765,10098,11456,11726,12431,12866,13204,13427,13671,14140,14400,14614,14795,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	53049188	53056377	chr12:53049188-53056377	0	+	53049188	53049188	8553170	9	60,109,38,39,39,50,172,51,810,	0,2666,3266,4222,4585,4776,5081,5997,6379,
#Deleted in new
chr12	53049207	53052372	chr12:53049207-53052372	0	+	53049207	53049207	8553170	2	41,518,	0,2647,
#Partially deleted in new
chr12	53049895	53064372	chr12:53049895-53064372	1	+	53050185	53063882	0	29	365,109,38,39,39,50,172,51,123,65,84,113,61,76,130,66,114,1212,151,590,90,126,93,78,78,169,69,30,629,	0,1959,2559,3515,3878,4069,4374,5290,5672,5885,7117,7671,7877,8131,8420,8676,8818,9151,10509,10779,11484,11919,12257,12480,12724,13193,13453,13667,13848,
#Deleted in new
chr12	53050031	53053610	chr12:53050031-53053610	0	+	53050031	53050031	8553170	4	229,109,38,200,	0,1823,2423,3379,
#Partially deleted in new
chr12	53050050	53064372	chr12:53050050-53064372	0	+	53050050	53050050	8553170	28	210,109,38,39,39,50,172,51,123,65,84,113,61,76,322,141,1212,151,590,90,126,93,74,78,169,69,30,629,	0,1804,2404,3360,3723,3914,4219,5135,5517,5730,6962,7516,7722,7976,8265,8663,8996,10354,10624,11329,11764,12102,12329,12569,13038,13298,13512,13693,
#Partially deleted in new
chr12	53050185	53064372	chr12:53050185-53064372	1	+	53050185	53063882	0	29	75,109,38,39,39,50,172,51,123,65,84,113,61,76,130,66,114,921,151,590,90,126,93,78,78,169,69,30,629,	0,1669,2269,3225,3588,3779,4084,5000,5382,5595,6827,7381,7587,7841,8130,8386,8528,8861,10219,10489,11194,11629,11967,12190,12434,12903,13163,13377,13558,
#Partially deleted in new
chr12	53050185	53064372	chr12:53050185-53064372	1	+	53050185	53063882	789624	30	75,109,38,39,39,50,172,51,123,65,84,113,61,76,130,66,114,925,92,151,590,90,126,93,78,78,169,69,30,629,	0,1669,2269,3225,3588,3779,4084,5000,5382,5595,6827,7381,7587,7841,8130,8386,8528,8861,9981,10219,10489,11194,11629,11967,12190,12434,12903,13163,13377,13558,
#Partially deleted in new
chr12	53050185	53064372	chr12:53050185-53064372	1	+	53050185	53063882	0	29	75,109,38,39,39,50,172,51,123,65,84,113,61,76,130,66,114,1212,151,590,90,126,93,78,72,169,69,30,629,	0,1669,2269,3225,3588,3779,4084,5000,5382,5595,6827,7381,7587,7841,8130,8386,8528,8861,10219,10489,11194,11629,11967,12190,12434,12903,13163,13377,13558,
#Deleted in new
chr12	53053103	53054418	chr12:53053103-53054418	0	-	53053103	53053103	8553170	2	471,98,	0,1217,
#Partially deleted in new
chr12	53054026	53055806	chr12:53054026-53055806	0	+	53054026	53054026	8553170	4	415,51,123,26,	0,1159,1541,1754,
#Deleted in new
chr12	53056943	53057012	chr12:53056943-53057012	3	+	53056943	53056943	5263520	1	69,	0,
#Deleted in new
chr12	53057745	53058394	chr12:53057745-53058394	0	+	53057745	53057745	8553170	3	88,76,79,	0,281,570,
#Deleted in new
chr12	53057927	53058742	chr12:53057927-53058742	0	+	53057927	53057927	8553170	2	175,427,	0,388,
#Deleted in new
chr12	53058073	53059270	chr12:53058073-53059270	0	+	53058073	53059270	789624	5	29,130,66,141,224,	0,242,498,640,973,
#Deleted in new
chr12	53058545	53059382	chr12:53058545-53059382	0	+	53058545	53058545	8553170	3	92,114,336,	0,168,501,
#Deleted in new
chr12	53060344	53060988	chr12:53060344-53060988	0	+	53060344	53060344	8553170	2	211,314,	0,330,
#Deleted in new
chr12	53060549	53061895	chr12:53060549-53061895	0	+	53060549	53060860	789624	5	6,85,416,90,81,	0,125,299,830,1265,
#Deleted in new
chr12	53061673	53063236	chr12:53061673-53063236	0	+	53061673	53061673	8553170	5	267,93,78,78,148,	0,479,702,946,1415,
#Deleted in new
chr12	53061711	53064312	chr12:53061711-53064312	0	+	53061711	53061711	8553170	6	534,78,638,69,30,569,	0,664,908,1637,1851,2032,
#Deleted in new
chr12	53062899	53063511	chr12:53062899-53063511	0	+	53062899	53062899	8553170	2	358,163,	0,449,
#Partially deleted in new
chr12	53064315	53079420	chr12:53064315-53079420	3	-	53065831	53079333	0	11	1651,173,120,58,150,186,136,125,76,147,110,	0,1998,2257,3332,3839,8970,10333,10779,11420,12799,14995,
#Deleted in new
chr12	53064950	53066359	chr12:53064950-53066359	0	-	53065831	53066359	789624	3	324,265,46,	0,751,1363,
#Partially deleted in new
chr12	53066601	53079404	chr12:53066601-53079404	0	-	53073344	53079333	789624	8	91,58,150,186,125,76,147,94,	0,1046,1553,6684,8493,9134,10513,12709,
#Partially deleted in new
chr12	53068290	53079388	chr12:53068290-53079388	0	-	53068290	53068290	8553170	6	14,186,571,76,147,78,	0,4995,6358,7445,8824,11020,
#Partially deleted in new
chr12	53073159	53075744	chr12:53073159-53075744	0	-	53073159	53073159	8553170	4	312,136,125,9,	0,1489,1935,2576,
#Partially deleted in new
chr12	53097435	53102345	chr12:53097435-53102345	1	+	53097717	53102167	789624	4	616,140,120,301,	0,3282,3605,4609,
#Partially deleted in new
chr12	53097444	53102340	chr12:53097444-53102340	3	+	53097717	53102167	0	4	607,146,120,296,	0,3267,3596,4600,
#Partially deleted in new
chr12	53097666	53101163	chr12:53097666-53101163	0	+	53097717	53100730	789624	4	385,58,146,123,	0,1600,3045,3374,
#Partially deleted in new
chr12	53098856	53102337	chr12:53098856-53102337	1	+	53100854	53102167	8553170	5	102,58,146,120,293,	0,410,1855,2184,3188,
#Partially deleted in new
chr12	53098923	53102340	chr12:53098923-53102340	1	+	53100854	53102167	8553170	4	35,146,120,296,	0,1788,2117,3121,
#Partially deleted in new
chr12	53103517	53124538	chr12:53103517-53124538	3	+	53103577	53124123	789624	15	142,56,137,60,108,265,70,85,46,130,98,99,136,146,466,	0,633,1589,2043,2389,11872,12579,14832,15372,15606,17268,17785,19563,20210,20555,
#Partially deleted in new
chr12	53103517	53115516	chr12:53103517-53115516	0	+	53103577	53115516	789624	5	142,56,137,108,127,	0,633,1589,2389,11872,
#Partially deleted in new
chr12	53103530	53124350	chr12:53103530-53124350	0	+	53103577	53119193	789624	14	129,56,137,60,108,265,70,85,130,98,99,136,146,278,	0,620,1576,2030,2376,11859,12566,14819,15593,17255,17772,19550,20197,20542,
#Deleted in new
chr12	53131349	53131985	chr12:53131349-53131985	7	+	53131349	53131349	16724991	1	636,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	53138544	53138651	chr12:53138544-53138651	3	-	53138544	53138544	8553170	1	107,	0,
#Partially deleted in new
chr12	53142052	53142327	chr12:53142052-53142327	7	+	53142052	53142052	16724991	1	275,	0,
#Deleted in new
chr12	53153271	53154484	chr12:53153271-53154484	7	+	53153271	53153271	16724991	1	1213,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr12	53157662	53180596	chr12:53157662-53180596	1	-	53158510	53179808	0	17	1022,90,52,200,82,65,117,55,80,116,107,91,127,132,43,236,30,	0,1960,2224,2457,3100,3464,3610,12409,12760,13663,14219,14683,14859,15682,16065,22114,22904,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	53157688	53173775	chr12:53157688-53173775	1	-	53161340	53173470	789624	14	735,91,52,200,82,117,55,80,169,107,91,127,132,48,	0,1933,2198,2431,3074,3584,12383,12734,13584,14193,14657,14833,15656,16039,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	53157688	53173770	chr12:53157688-53173770	0	-	53161340	53173470	789624	14	735,90,52,200,82,117,55,80,169,107,91,127,132,43,	0,1934,2198,2431,3074,3584,12383,12734,13584,14193,14657,14833,15656,16039,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	53157689	53180596	chr12:53157689-53180596	0	-	53158510	53180596	789624	16	995,90,52,200,82,65,117,55,80,116,107,91,127,132,40,30,	0,1933,2197,2430,3073,3437,3583,12382,12733,13636,14192,14656,14832,15655,16038,22877,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	53157693	53180596	chr12:53157693-53180596	1	-	53158510	53173470	0	12	991,90,52,200,82,65,117,55,80,155,45,30,	0,1929,2193,2426,3069,3433,3579,12378,12729,15651,21404,22873,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr12	53158138	53180909	chr12:53158138-53180909	3	-	53158510	53173470	0	17	546,90,52,200,82,65,117,55,80,116,107,91,127,132,43,41,178,	0,1484,1748,1981,2624,2988,3134,11933,12284,13187,13743,14207,14383,15206,15589,20963,22593,
#Partially deleted in new
chr12	53158510	53180646	chr12:53158510-53180646	1	-	53158510	53173470	0	16	174,90,52,200,82,65,117,55,80,116,107,91,127,132,240,46,	0,1112,1376,1609,2252,2616,2762,11561,11912,12815,13371,13835,14011,14834,21262,22090,
#Deleted in new
chr12	53159585	53161000	chr12:53159585-53161000	3	+	53159585	53159585	8553170	3	55,346,80,	0,349,1335,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	53159886	53170712	chr12:53159886-53170712	0	-	53159886	53159886	8553170	7	52,200,82,65,117,55,290,	0,233,876,1240,1386,10185,10536,
#Partially deleted in new
chr12	53160276	53170376	chr12:53160276-53170376	0	-	53160276	53160276	8553170	5	43,82,65,117,305,	0,486,850,996,9795,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	53160290	53170890	chr12:53160290-53170890	0	-	53160290	53160290	8553170	5	29,82,117,55,468,	0,472,982,9781,10132,
#Partially deleted in new
chr12	53161163	53173770	chr12:53161163-53173770	0	-	53161163	53173470	789624	6	28,117,55,80,132,43,	0,109,8908,9259,12181,12564,
#Partially deleted in new
chr12	53161321	53173374	chr12:53161321-53173374	0	-	53170428	53173374	789624	7	68,55,80,107,91,127,30,	0,8750,9101,10560,11024,11200,12023,
#Partially deleted in new
chr12	53170070	53173790	chr12:53170070-53173790	0	-	53171976	53173470	789624	6	56,80,116,111,132,63,	0,352,1255,1807,3274,3657,
#Partially deleted in new
chr12	53170070	53172371	chr12:53170070-53172371	0	-	53170070	53170070	8553170	5	56,80,265,107,26,	0,352,1106,1811,2275,
#Partially deleted in new
chr12	53171403	53180646	chr12:53171403-53180646	0	-	53171403	53173470	789624	7	38,107,91,127,132,40,46,	0,478,942,1118,1941,2324,9197,
#Partially deleted in new
chr12	53171664	53173492	chr12:53171664-53173492	0	-	53171664	53171664	8553170	5	101,111,91,127,148,	0,213,681,857,1680,
#Partially deleted in new
chr12	53171894	53180598	chr12:53171894-53180598	0	-	53171894	53173470	789624	7	94,91,127,132,43,46,32,	0,451,627,1450,1833,7726,8672,
#Partially deleted in new
chr12	53171945	53173919	chr12:53171945-53173919	0	-	53171945	53173470	789624	5	43,91,127,132,192,	0,400,576,1399,1782,
#Deleted in new
chr12	53173268	53173944	chr12:53173268-53173944	0	-	53173268	53173268	8553170	2	208,217,	0,459,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	53180699	53195141	chr12:53180699-53195141	3	+	53181983	53187590	789624	7	138,316,150,90,124,119,7641,	0,977,4191,4687,5254,5691,6801,
#Partially deleted in new
chr12	53180703	53186031	chr12:53180703-53186031	0	+	53180703	53180703	8553170	5	134,514,150,90,78,	0,973,4187,4683,5250,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	53185384	53186794	chr12:53185384-53186794	0	+	53185384	53185384	8553170	3	92,124,404,	0,569,1006,
#Deleted in new
chr12	53187606	53188756	chr12:53187606-53188756	0	+	53187606	53187606	8553170	2	157,220,	0,930,
#Partially deleted in new
chr12	53191317	53207307	chr12:53191317-53207307	3	-	53191555	53200443	0	16	319,161,209,220,224,194,147,90,96,159,242,171,202,204,123,106,	0,541,1012,1373,1822,2390,2880,4056,4308,4723,5261,6175,6432,8925,9754,15884,
#Partially deleted in new
chr12	53191322	53207282	chr12:53191322-53207282	1	-	53191555	53200443	0	16	314,161,209,220,224,194,147,90,96,159,242,171,202,204,77,81,	0,536,1007,1368,1817,2385,2875,4051,4303,4718,5256,6170,6427,8920,9795,15879,
#Deleted in new
chr12	53191322	53192488	chr12:53191322-53192488	0	-	53191698	53192488	789624	3	409,161,159,	0,536,1007,
#Partially deleted in new
chr12	53191370	53200443	chr12:53191370-53200443	1	-	53191555	53200443	0	12	266,161,209,194,147,90,96,159,242,171,202,201,	0,488,959,2337,2827,4003,4255,4670,5208,6122,6379,8872,
#Partially deleted in new
chr12	53191556	53207281	chr12:53191556-53207281	0	-	53192430	53200443	789624	12	80,161,209,147,90,96,159,242,171,202,204,80,	0,302,773,2641,3817,4069,4484,5022,5936,6193,8686,15645,
#Deleted in new
chr12	53192967	53194258	chr12:53192967-53194258	0	-	53192967	53192967	8553170	3	396,194,61,	0,740,1230,
#Deleted in new
chr12	53193676	53194458	chr12:53193676-53194458	0	-	53193676	53193676	8553170	2	225,261,	0,521,
#Deleted in new
chr12	53195653	53197111	chr12:53195653-53197111	0	-	53195653	53195653	8553170	3	68,159,533,	0,387,925,
#Deleted in new
chr12	53196100	53197709	chr12:53196100-53197709	0	-	53196100	53196100	8553170	3	99,242,217,	0,478,1392,
#Partially deleted in new
chr12	53196331	53207251	chr12:53196331-53207251	0	-	53196331	53196331	8553170	4	1332,202,123,50,	0,1418,4740,10870,
#Partially deleted in new
chr12	53196593	53207251	chr12:53196593-53207251	0	-	53196593	53196593	8553170	4	1070,202,204,50,	0,1156,3649,10608,
#Partially deleted in new
chr12	53197590	53207281	chr12:53197590-53207281	0	-	53197590	53200443	789624	5	73,202,204,48,80,	0,159,2652,3556,9611,
#Partially deleted in new
chr12	53197871	53201300	chr12:53197871-53201300	0	-	53197871	53200443	789624	3	80,204,229,	0,2371,3200,
#Partially deleted in new
chr12	53197886	53207254	chr12:53197886-53207254	0	-	53197886	53200443	789624	5	65,204,123,131,53,	0,2356,3185,8787,9315,
#Partially deleted in new
chr12	53210566	53232256	chr12:53210566-53232256	1	-	53211675	53215762	0	9	1297,159,205,177,161,142,149,67,283,	0,2518,2929,3492,3879,4726,5079,20602,21407,
#Partially deleted in new
chr12	53210569	53232252	chr12:53210569-53232252	3	-	53211675	53227545	0	10	1294,159,205,177,161,142,149,326,67,279,	0,2515,2926,3489,3876,4723,5076,16792,20599,21404,
#Partially deleted in new
chr12	53211330	53220259	chr12:53211330-53220259	1	-	53211675	53220100	0	8	533,159,205,177,161,142,149,310,	0,1754,2165,2728,3115,3962,4315,8619,
#Partially deleted in new
chr12	53211392	53220413	chr12:53211392-53220413	1	-	53211675	53220216	0	7	471,159,205,177,161,142,464,	0,1692,2103,2666,3053,3900,8557,
#Partially deleted in new
chr12	53211413	53232232	chr12:53211413-53232232	0	-	53211413	53211413	8553170	8	450,159,205,177,161,142,67,259,	0,1671,2082,2645,3032,3879,19755,20560,
#Deleted in new
chr12	53213236	53220377	chr12:53213236-53220377	0	-	53213236	53213236	8553170	6	464,177,161,170,149,428,	0,822,1209,2056,2409,6713,
#Deleted in new
chr12	53213939	53215352	chr12:53213939-53215352	0	-	53213939	53213939	8553170	3	296,161,60,	0,506,1353,
#Deleted in new
chr12	53214093	53214857	chr12:53214093-53214857	0	-	53214093	53214093	8553170	2	142,412,	0,352,
#Deleted in new
chr12	53215373	53220084	chr12:53215373-53220084	0	-	53215373	53215373	8553170	2	421,135,	0,4576,
#Partially deleted in new
chr12	53227373	53232214	chr12:53227373-53232214	0	-	53227373	53227545	789624	2	314,241,	0,4600,
#Partially deleted in new
chr12	53227447	53232570	chr12:53227447-53232570	0	-	53227447	53227545	789624	4	240,67,219,60,	0,3721,4526,5063,
#Partially deleted in new
chr12	53227499	53232980	chr12:53227499-53232980	0	-	53227499	53227545	789624	4	188,67,219,470,	0,3669,4474,5011,
#Partially deleted in new
chr12	53227555	53232921	chr12:53227555-53232921	0	-	53227555	53227555	8553170	4	132,67,219,158,	0,3613,4418,5208,
#Partially deleted in new
chr12	53227557	53232216	chr12:53227557-53232216	0	-	53227557	53227557	8553170	4	130,143,67,243,	0,2353,3611,4416,
#Partially deleted in new
chr12	53227597	53232231	chr12:53227597-53232231	0	-	53227597	53227597	8553170	4	90,143,64,258,	0,2313,3571,4376,
#Partially deleted in new
chr12	53227607	53232222	chr12:53227607-53232222	0	-	53227607	53227607	8553170	4	80,164,67,249,	0,2303,3561,4366,
#Partially deleted in new
chr12	53227634	53232188	chr12:53227634-53232188	0	-	53227634	53227634	8553170	4	53,212,64,215,	0,2207,3534,4339,
#Deleted in new
chr12	53231167	53232586	chr12:53231167-53232586	0	-	53231167	53231167	8553170	4	68,160,219,76,	0,223,806,1343,
#Deleted in new
chr12	53241888	53242723	chr12:53241888-53242723	3	+	53241922	53242441	789624	1	835,	0,
#Deleted in new
chr12	53251250	53251897	chr12:53251250-53251897	0	+	53251250	53251250	8553170	2	374,193,	0,454,
#Deleted in new
chr12	53251585	53254405	chr12:53251585-53254405	1	+	53251732	53254188	789624	2	450,1588,	0,1232,
#Deleted in new
chr12	53251652	53253752	chr12:53251652-53253752	0	+	53251732	53253752	789624	2	383,935,	0,1165,
#Deleted in new
chr12	53252095	53254404	chr12:53252095-53254404	3	+	53252835	53254188	789624	2	173,1587,	0,722,
#Deleted in new
chr12	53252448	53253209	chr12:53252448-53253209	0	+	53252448	53252448	8553170	2	35,392,	0,369,
#Partially deleted in new
chr12	53268298	53293643	chr12:53268298-53293643	3	+	53268766	53293474	789624	31	79,93,1062,105,121,137,194,240,145,139,140,135,120,172,129,157,110,989,370,162,214,191,128,123,156,171,105,116,84,165,371,	0,456,725,2079,2379,4422,6518,8321,8784,9171,9522,11433,13208,13965,14830,15083,15759,17625,19673,20239,20791,21105,21786,22048,22542,23391,23685,23979,24275,24507,24974,
#Deleted in new
chr12	53268298	53269565	chr12:53268298-53269565	0	+	53268766	53269565	789624	3	79,93,542,	0,456,725,
#Partially deleted in new
chr12	53268332	53293638	chr12:53268332-53293638	0	+	53268766	53268916	789624	31	45,174,1062,105,121,137,194,240,145,139,140,135,120,172,129,157,110,989,370,162,214,191,128,123,156,171,105,116,84,165,366,	0,422,691,2045,2345,4388,6484,8287,8750,9137,9488,11399,13174,13931,14796,15049,15725,17591,19639,20205,20757,21071,21752,22014,22508,23357,23651,23945,24241,24473,24940,
#Partially deleted in new
chr12	53268334	53293474	chr12:53268334-53293474	1	+	53268766	53293474	789624	31	72,93,1062,105,121,137,194,240,145,139,140,135,120,172,129,157,110,989,370,162,214,191,128,123,156,171,105,116,84,165,202,	0,420,689,2043,2343,4386,6482,8285,8748,9135,9486,11397,13172,13929,14794,15047,15723,17589,19637,20203,20755,21069,21750,22012,22506,23355,23649,23943,24239,24471,24938,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	53274080	53274952	chr12:53274080-53274952	0	+	53274080	53274080	8553170	2	386,136,	0,736,
#Partially deleted in new
chr12	53279704	53288324	chr12:53279704-53288324	0	+	53279704	53279704	8553170	7	162,120,172,129,157,110,353,	0,1802,2559,3424,3677,4353,8267,
#Partially deleted in new
chr12	53282249	53289295	chr12:53282249-53289295	0	+	53282249	53282249	8553170	7	186,129,157,110,370,162,206,	0,879,1132,1808,5722,6288,6840,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	53287255	53293635	chr12:53287255-53293635	0	+	53287255	53287255	8553170	10	1086,766,1066,156,171,105,116,84,165,363,	0,1282,2148,3585,4434,4728,5022,5318,5550,6017,
#Deleted in new
chr12	53287880	53289460	chr12:53287880-53289460	0	+	53287880	53287880	8553170	4	461,162,214,57,	0,657,1209,1523,
#Partially deleted in new
chr12	53295290	53299450	chr12:53295290-53299450	3	+	53295567	53299345	789624	6	349,103,32,75,106,182,	0,548,953,2559,2754,3978,
#Partially deleted in new
chr12	53295524	53299450	chr12:53295524-53299450	1	+	53295567	53299345	789624	4	115,75,106,182,	0,2325,2520,3744,
#Deleted in new
chr12	53295526	53296324	chr12:53295526-53296324	0	+	53295526	53295526	8553170	2	113,486,	0,312,
#Partially deleted in new
chr12	53295535	53299450	chr12:53295535-53299450	1	+	53295567	53299345	789624	3	104,106,182,	0,2509,3733,
#Partially deleted in new
chr12	53295541	53299450	chr12:53295541-53299450	0	+	53295567	53297875	789624	5	98,103,75,106,182,	0,297,2308,2503,3727,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	53295541	53299446	chr12:53295541-53299446	0	+	53295541	53295541	8553170	5	98,103,1495,106,178,	0,297,888,2503,3727,
#Partially deleted in new
chr12	53295547	53297765	chr12:53295547-53297765	0	+	53295547	53295547	8553170	3	92,437,69,	0,291,2149,
#Partially deleted in new
chr12	53295551	53299450	chr12:53295551-53299450	1	+	53295567	53299345	789624	6	88,103,32,75,106,182,	0,287,692,2298,2493,3717,
#Partially deleted in new
chr12	53295558	53297924	chr12:53295558-53297924	0	+	53295558	53295558	8553170	2	717,222,	0,2144,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	53295575	53297404	chr12:53295575-53297404	0	+	53295575	53295575	8553170	3	64,629,33,	0,263,1796,
#Partially deleted in new
chr12	53296034	53299343	chr12:53296034-53299343	0	+	53296034	53296034	8553170	4	241,75,106,75,	0,1815,2010,3234,
#Partially deleted in new
chr12	53297612	53299446	chr12:53297612-53299446	0	+	53297612	53297612	8553170	3	312,106,178,	0,432,1656,
#Partially deleted in new
chr12	53297787	53299446	chr12:53297787-53299446	0	+	53297787	53297787	8553170	2	363,178,	0,1481,
#Partially deleted in new
chr12	53297884	53298488	chr12:53297884-53298488	0	+	53297884	53297884	8553170	2	40,444,	0,160,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	53298654	53300314	chr12:53298654-53300314	3	-	53298654	53298654	8553170	2	475,172,	0,1488,
#Partially deleted in new
chr12	53299685	53307158	chr12:53299685-53307158	3	+	53299737	53307149	789624	7	268,113,160,153,123,182,193,	0,464,3348,6222,6512,6994,7280,
#Partially deleted in new
chr12	53299717	53307171	chr12:53299717-53307171	0	+	53299717	53299717	8553170	6	545,160,153,123,182,206,	0,3316,6190,6480,6962,7248,
#Partially deleted in new
chr12	53299749	53307171	chr12:53299749-53307171	1	+	53299809	53307149	789624	6	204,113,160,123,182,206,	0,400,3284,6448,6930,7216,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	53299749	53303848	chr12:53299749-53303848	0	+	53299749	53299749	8553170	3	204,113,815,	0,400,3284,
#Partially deleted in new
chr12	53299936	53303296	chr12:53299936-53303296	0	+	53299936	53299936	8553170	2	326,263,	0,3097,
#Partially deleted in new
chr12	53300092	53307177	chr12:53300092-53307177	1	+	53305907	53307149	789624	5	170,153,123,182,212,	0,5815,6105,6587,6873,
#Partially deleted in new
chr12	53303167	53307171	chr12:53303167-53307171	0	+	53303167	53307149	789624	3	26,182,206,	0,3512,3798,
#Partially deleted in new
chr12	53305695	53307108	chr12:53305695-53307108	0	+	53305695	53305695	8553170	4	365,123,182,143,	0,502,984,1270,
#Partially deleted in new
chr12	53306085	53307148	chr12:53306085-53307148	0	+	53306085	53306085	8553170	3	235,182,183,	0,594,880,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	53306556	53307173	chr12:53306556-53307173	0	+	53306556	53306556	8553170	2	305,208,	0,409,
#Partially deleted in new
chr12	53307455	53321631	chr12:53307455-53321631	3	-	53307488	53321465	789624	16	258,85,82,68,94,91,61,125,121,144,99,47,92,56,128,289,	0,389,596,826,979,1269,1504,1701,2145,6842,7295,7638,7879,8271,13109,13887,
#Partially deleted in new
chr12	53307456	53321257	chr12:53307456-53321257	0	-	53307456	53307456	8553170	14	257,85,82,68,94,91,61,125,121,144,47,92,56,693,	0,388,595,825,978,1268,1503,1700,2144,6841,7637,7878,8270,13108,
#Partially deleted in new
chr12	53307458	53321596	chr12:53307458-53321596	1	-	53307488	53321465	789624	15	255,85,82,68,94,91,61,125,121,144,47,92,56,128,254,	0,386,593,823,976,1266,1501,1698,2142,6839,7635,7876,8268,13106,13884,
#Partially deleted in new
chr12	53307459	53324758	chr12:53307459-53324758	1	-	53307488	53315753	789624	15	254,85,82,68,94,91,61,125,121,144,99,47,56,128,197,	0,385,592,822,975,1265,1500,1697,2141,6838,7291,7634,8267,13105,17102,
#Partially deleted in new
chr12	53307489	53314815	chr12:53307489-53314815	0	-	53307489	53314815	789624	10	224,82,68,94,91,61,125,121,144,65,	0,562,792,945,1235,1470,1667,2111,6808,7261,
#Partially deleted in new
chr12	53307737	53309665	chr12:53307737-53309665	0	-	53307737	53307737	8553170	7	396,68,94,91,61,125,65,	0,544,697,987,1222,1419,1863,
#Partially deleted in new
chr12	53308746	53315243	chr12:53308746-53315243	0	-	53308746	53308746	8553170	7	69,61,125,121,144,99,150,	0,213,410,854,5551,6004,6347,
#Partially deleted in new
chr12	53308961	53309862	chr12:53308961-53309862	0	-	53308961	53308961	8553170	2	320,262,	0,639,
#Partially deleted in new
chr12	53309156	53315127	chr12:53309156-53315127	0	-	53309156	53309156	8553170	4	125,121,552,34,	0,444,5141,5937,
#Partially deleted in new
chr12	53309156	53321983	chr12:53309156-53321983	0	-	53309156	53309156	8553170	8	125,121,144,99,47,56,128,107,	0,444,5141,5594,5937,6570,11408,12720,
#Partially deleted in new
chr12	53309159	53321581	chr12:53309159-53321581	0	-	53309159	53321465	789624	8	122,121,144,47,92,56,128,239,	0,441,5138,5934,6175,6567,11405,12183,
#Partially deleted in new
chr12	53309254	53321616	chr12:53309254-53321616	0	-	53309254	53309254	8553170	9	27,121,144,99,47,92,56,128,146,	0,346,5043,5496,5839,6080,6472,11310,12216,
#Partially deleted in new
chr12	53309649	53321208	chr12:53309649-53321208	0	-	53309649	53309649	8553170	7	72,144,99,47,92,56,644,	0,4648,5101,5444,5685,6077,10915,
#Partially deleted in new
chr12	53314388	53321997	chr12:53314388-53321997	0	-	53314388	53314388	8553170	7	53,99,47,92,56,128,121,	0,362,705,946,1338,6176,7488,
#Partially deleted in new
chr12	53314399	53321257	chr12:53314399-53321257	0	-	53314399	53314399	8553170	7	42,99,47,152,56,128,57,	0,351,694,935,1327,6165,6801,
#Partially deleted in new
chr12	53314773	53324712	chr12:53314773-53324712	0	-	53314773	53314773	8553170	6	76,47,92,56,128,151,	0,320,561,953,5791,9788,
#Partially deleted in new
chr12	53314793	53324864	chr12:53314793-53324864	0	-	53314793	53314793	8553170	6	56,47,92,56,128,173,	0,300,541,933,5771,9898,
#Partially deleted in new
chr12	53315243	53321560	chr12:53315243-53321560	0	-	53315243	53315243	8553170	4	183,56,128,218,	0,483,5321,6099,
#Partially deleted in new
chr12	53315423	53321610	chr12:53315423-53321610	0	-	53315423	53315423	8553170	3	359,128,140,	0,5141,6047,
#Partially deleted in new
chr12	53315551	53321560	chr12:53315551-53321560	0	-	53315551	53315551	8553170	3	231,128,218,	0,5013,5791,
#Partially deleted in new
chr12	53326574	53336382	chr12:53326574-53336382	3	-	53328145	53335646	789624	3	2846,68,237,	0,9051,9571,
#Partially deleted in new
chr12	53326578	53335754	chr12:53326578-53335754	1	-	53328145	53335646	789624	2	2842,129,	0,9047,
#Partially deleted in new
chr12	53328145	53336342	chr12:53328145-53336342	1	-	53328145	53329387	789624	2	1275,197,	0,8000,
#Partially deleted in new
chr12	53328580	53345315	chr12:53328580-53345315	0	-	53328580	53329387	789624	2	840,202,	0,16533,
#Partially deleted in new
chr12	53380175	53382577	chr12:53380175-53382577	0	+	53380291	53382577	789624	3	123,155,324,	0,1483,2078,
#Partially deleted in new
chr12	53380193	53411630	chr12:53380193-53411630	3	+	53380291	53411240	0	6	105,155,1513,169,200,704,	0,1465,1916,26391,29168,30733,
#Partially deleted in new
chr12	53380638	53416446	chr12:53380638-53416446	1	+	53381672	53411240	0	6	46,155,1513,169,200,5520,	0,1020,1471,25946,28723,30288,
#Deleted in new
chr12	53381301	53382658	chr12:53381301-53382658	0	+	53381672	53382658	789624	2	512,549,	0,808,
#Partially deleted in new
chr12	53423854	53431534	chr12:53423854-53431534	3	+	53423934	53431473	789624	11	129,183,192,78,119,231,115,173,148,137,358,	0,433,854,1310,1600,1834,5041,5598,5976,6291,7322,
#Partially deleted in new
chr12	53423865	53431473	chr12:53423865-53431473	1	+	53423934	53431192	789624	11	118,183,192,78,119,231,115,173,148,133,297,	0,422,843,1299,1589,1823,5030,5587,5965,6284,7311,
#Partially deleted in new
chr12	53423934	53431473	chr12:53423934-53431473	1	+	53423934	53431473	789624	9	49,183,192,78,119,231,115,173,297,	0,353,774,1230,1520,1754,4961,5518,7242,
#Deleted in new
chr12	53424277	53425123	chr12:53424277-53425123	0	+	53424277	53424277	8553170	2	193,415,	0,431,
#Partially deleted in new
chr12	53425075	53428924	chr12:53425075-53428924	0	+	53425075	53425075	8553170	3	89,465,29,	0,379,3820,
#Partially deleted in new
chr12	53425081	53431264	chr12:53425081-53431264	0	+	53425081	53425081	8553170	4	83,33,234,1812,	0,373,604,4371,
#Partially deleted in new
chr12	53425115	53430283	chr12:53425115-53430283	0	+	53428952	53430283	789624	7	49,33,231,115,173,148,138,	0,339,573,3780,4337,4715,5030,
#Partially deleted in new
chr12	53441604	53446633	chr12:53441604-53446633	1	+	53442714	53446059	789624	4	188,39,383,619,	0,1090,1786,4410,
#Partially deleted in new
chr12	53441677	53446094	chr12:53441677-53446094	1	+	53442714	53446059	789624	4	123,39,383,80,	0,1017,1713,4337,
#Partially deleted in new
chr12	53441731	53446636	chr12:53441731-53446636	1	+	53442714	53446059	789624	4	61,39,287,622,	0,963,1755,4283,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	53441741	53443050	chr12:53441741-53443050	0	+	53441741	53441741	8553170	2	51,356,	0,953,
#Partially deleted in new
chr12	53441744	53446475	chr12:53441744-53446475	1	+	53442714	53443724	789624	4	48,39,207,461,	0,950,1822,4270,
#Partially deleted in new
chr12	53441746	53444091	chr12:53441746-53444091	1	+	53442714	53443827	789624	3	46,39,701,	0,948,1644,
#Partially deleted in new
chr12	53441747	53446645	chr12:53441747-53446645	1	+	53442714	53446059	789624	4	45,39,95,631,	0,947,1931,4267,
#Partially deleted in new
chr12	53441748	53446536	chr12:53441748-53446536	1	+	53442714	53446059	789624	4	44,39,233,522,	0,946,1792,4266,
#Partially deleted in new
chr12	53441755	53446218	chr12:53441755-53446218	1	+	53441795	53446059	789624	4	62,39,383,204,	0,939,1635,4259,
#Partially deleted in new
chr12	53441761	53446638	chr12:53441761-53446638	3	+	53442714	53446059	789624	4	31,39,233,624,	0,933,1779,4253,
#Partially deleted in new
chr12	53441764	53443536	chr12:53441764-53443536	0	+	53442714	53443536	789624	3	76,39,146,	0,930,1626,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	53441794	53443277	chr12:53441794-53443277	0	+	53441794	53441794	8553170	2	792,583,	0,900,
#Partially deleted in new
chr12	53442554	53446315	chr12:53442554-53446315	1	+	53442714	53446059	789624	4	32,39,383,301,	0,140,836,3460,
#Partially deleted in new
chr12	53452101	53479826	chr12:53452101-53479826	1	+	53454800	53479442	0	14	275,144,24,33,117,132,129,75,42,73,39,56,170,421,	0,2624,3245,3359,3783,7170,8913,10391,13830,15119,15703,16675,19536,27304,
#Partially deleted in new
chr12	53452101	53481161	chr12:53452101-53481161	1	+	53454800	53479442	0	13	275,144,24,33,117,132,129,75,42,73,56,170,1756,	0,2624,3245,3359,3783,7170,8913,10391,13830,15119,16675,19536,27304,
#Partially deleted in new
chr12	53452101	53481161	chr12:53452101-53481161	1	+	53454800	53479442	0	14	275,144,24,33,117,132,129,87,42,73,39,56,170,1756,	0,2624,3245,3359,3783,7170,8913,10379,13830,15119,15703,16675,19536,27304,
#Partially deleted in new
chr12	53452125	53479769	chr12:53452125-53479769	1	+	53454800	53479442	789624	13	251,144,24,33,117,132,129,87,73,39,56,170,364,	0,2600,3221,3335,3759,7146,8889,10355,15095,15679,16651,19512,27280,
#Partially deleted in new
chr12	53452178	53461143	chr12:53452178-53461143	0	+	53454800	53461143	789624	6	198,144,33,117,132,129,	0,2547,3282,3706,7093,8836,
#Deleted in new
chr12	53452816	53455950	chr12:53452816-53455950	0	+	53454800	53455950	789624	5	467,144,24,33,66,	0,1909,2530,2644,3068,
#Partially deleted in new
chr12	53452843	53461113	chr12:53452843-53461113	0	+	53454800	53461113	789624	7	132,144,24,33,117,132,99,	0,1882,2503,2617,3041,6428,8171,
#Deleted in new
chr12	53454383	53455477	chr12:53454383-53455477	0	+	53454800	53455477	789624	3	486,24,17,	0,963,1077,
#Partially deleted in new
chr12	53454733	53479824	chr12:53454733-53479824	1	+	53454800	53479442	0	12	136,24,33,117,132,129,87,42,73,56,170,419,	0,613,727,1151,4538,6281,7747,11198,12487,14043,16904,24672,
#Deleted in new
chr12	53454735	53456052	chr12:53454735-53456052	0	+	53454735	53454735	8553170	3	134,147,168,	0,611,1149,
#Partially deleted in new
chr12	53454736	53481162	chr12:53454736-53481162	1	+	53454800	53479442	0	12	133,24,33,117,132,129,75,42,73,56,170,1757,	0,610,724,1148,4535,6278,7756,11195,12484,14040,16901,24669,
#Partially deleted in new
chr12	53454784	53479620	chr12:53454784-53479620	1	+	53454800	53479442	0	13	85,24,33,117,132,129,87,42,73,39,56,170,215,	0,562,676,1100,4487,6230,7696,11147,12436,13020,13992,16853,24621,
#Partially deleted in new
chr12	53454859	53479683	chr12:53454859-53479683	0	+	53454859	53479442	789624	12	10,24,33,117,132,129,87,73,39,53,170,278,	0,487,601,1025,4412,6155,7621,12361,12945,13920,16778,24546,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	53455908	53460686	chr12:53455908-53460686	0	+	53455908	53455908	8553170	3	93,132,356,	0,3363,4422,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	53455939	53479850	chr12:53455939-53479850	0	+	53455939	53459943	789624	11	62,132,1344,87,93,42,73,39,56,170,445,	0,3332,3860,6541,8820,9992,11281,11865,12837,15698,23466,
#Partially deleted in new
chr12	53459384	53467666	chr12:53459384-53467666	0	+	53459384	53459384	8553170	4	19,129,87,446,	0,1630,3096,7836,
#Partially deleted in new
chr12	53461014	53476070	chr12:53461014-53476070	0	+	53461014	53475217	789624	8	129,75,42,73,39,56,170,1202,	0,1478,4917,6206,6790,7762,10623,13854,
#Partially deleted in new
chr12	53462513	53467569	chr12:53462513-53467569	0	+	53462513	53462513	8553170	3	54,42,349,	0,3418,4707,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	53464467	53465057	chr12:53464467-53465057	3	+	53464467	53464467	789624	1	590,	0,
#Partially deleted in new
chr12	53467722	53479821	chr12:53467722-53479821	0	+	53467722	53467722	8553170	3	1110,170,416,	0,3915,11683,
#Partially deleted in new
chr12	53468467	53479624	chr12:53468467-53479624	0	+	53468467	53468467	8553170	3	365,170,219,	0,3170,10938,
#Partially deleted in new
chr12	53479668	53499615	chr12:53479668-53499615	3	-	53481181	53487391	0	15	1612,271,71,625,138,117,110,109,159,159,192,184,209,174,189,	0,2272,2630,2896,3680,3938,4242,4588,5387,5648,6387,6770,7278,7586,19758,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	53480489	53486728	chr12:53480489-53486728	0	-	53480489	53480489	8553170	5	1722,1425,110,958,1412,	0,1809,3421,3767,4827,
#Partially deleted in new
chr12	53481120	53499456	chr12:53481120-53499456	1	-	53481181	53487391	0	14	160,271,71,625,138,117,110,109,159,159,192,184,482,30,	0,820,1178,1444,2228,2486,2790,3136,3935,4196,4935,5318,5826,18306,
#Partially deleted in new
chr12	53481121	53493866	chr12:53481121-53493866	1	-	53481181	53487391	0	14	159,271,71,625,138,117,110,109,159,159,192,184,482,168,	0,819,1177,1443,2227,2485,2789,3135,3934,4195,4934,5317,5825,12577,
#Partially deleted in new
chr12	53481121	53482587	chr12:53481121-53482587	0	-	53481121	53481121	8553170	3	159,271,289,	0,819,1177,
#Partially deleted in new
chr12	53481181	53487909	chr12:53481181-53487909	0	-	53483998	53487391	789624	14	99,271,71,625,138,117,110,120,159,159,192,184,209,655,	0,759,1117,1383,2167,2425,2729,3064,3874,4135,4874,5257,5765,6073,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	53485035	53485707	chr12:53485035-53485707	0	-	53485035	53485035	8553170	2	179,391,	0,281,
#Partially deleted in new
chr12	53486442	53499457	chr12:53486442-53499457	0	-	53486442	53486442	8553170	4	180,199,174,31,	0,504,812,12984,
#Partially deleted in new
chr12	53486846	53499458	chr12:53486846-53499458	0	-	53486846	53486846	8553170	2	582,32,	0,12580,
#Partially deleted in new
chr12	53486984	53493070	chr12:53486984-53493070	0	-	53486984	53486984	8553170	2	444,56,	0,6030,
#Partially deleted in new
chr12	53487314	53500063	chr12:53487314-53500063	0	-	53487314	53487391	789624	2	114,36,	0,12713,
#Deleted in new
chr12	53500161	53500936	chr12:53500161-53500936	3	-	53500161	53500161	8553170	1	775,	0,
#Deleted in new
chr12	53500920	53506431	chr12:53500920-53506431	0	+	53501408	53503745	789624	9	541,170,103,79,73,118,128,202,441,	0,1094,2106,2809,3476,3777,4214,4728,5070,
#Deleted in new
chr12	53500925	53506431	chr12:53500925-53506431	3	+	53501408	53506148	0	9	536,170,103,96,73,118,128,202,441,	0,1089,2101,2787,3471,3772,4209,4723,5065,
#Deleted in new
chr12	53500952	53506424	chr12:53500952-53506424	1	+	53502024	53506148	0	9	49,165,103,96,73,118,128,202,434,	0,1067,2074,2760,3444,3745,4182,4696,5038,
#Deleted in new
chr12	53501273	53506229	chr12:53501273-53506229	1	+	53501408	53505806	789624	6	188,96,73,118,202,239,	0,2439,3123,3424,4375,4717,
#Deleted in new
chr12	53501301	53504395	chr12:53501301-53504395	0	+	53501301	53501301	8553170	4	160,170,103,683,	0,713,1725,2411,
#Deleted in new
chr12	53501304	53502920	chr12:53501304-53502920	0	+	53501304	53501304	8553170	2	157,906,	0,710,
#Deleted in new
chr12	53501305	53506399	chr12:53501305-53506399	0	+	53501408	53503133	789624	9	156,125,186,96,73,118,128,202,409,	0,754,1721,2407,3091,3392,3829,4343,4685,
#Deleted in new
chr12	53501331	53503472	chr12:53501331-53503472	0	+	53501331	53501331	8553170	2	130,446,	0,1695,
#Deleted in new
chr12	53501349	53503698	chr12:53501349-53503698	0	+	53501349	53501349	8553170	3	112,170,672,	0,665,1677,
#Deleted in new
chr12	53501365	53505793	chr12:53501365-53505793	0	+	53503100	53505793	789624	7	96,103,96,73,118,128,145,	0,1661,2347,3031,3332,3769,4283,
#Deleted in new
chr12	53501590	53505851	chr12:53501590-53505851	0	+	53502024	53503745	789624	8	118,170,103,79,73,118,128,203,	0,424,1436,2139,2806,3107,3544,4058,
#Deleted in new
chr12	53501596	53505686	chr12:53501596-53505686	0	+	53503100	53505686	789624	7	112,103,96,73,118,128,38,	0,1430,2116,2800,3101,3538,4052,
#Deleted in new
chr12	53501598	53503549	chr12:53501598-53503549	0	+	53501598	53501598	8553170	4	110,170,186,91,	0,416,1428,1860,
#Deleted in new
chr12	53501603	53506423	chr12:53501603-53506423	0	+	53502024	53504743	789624	9	105,170,103,96,73,204,128,202,433,	0,411,1423,2109,2793,3008,3531,4045,4387,
#Deleted in new
chr12	53501604	53506396	chr12:53501604-53506396	0	+	53502024	53503133	789624	9	104,170,186,79,73,118,128,202,406,	0,410,1422,2125,2792,3093,3530,4044,4386,
#Deleted in new
chr12	53501618	53506412	chr12:53501618-53506412	1	+	53502024	53506148	0	9	90,170,103,96,73,118,128,202,422,	0,396,1408,2094,2778,3079,3516,4030,4372,
#Deleted in new
chr12	53502050	53506396	chr12:53502050-53506396	0	+	53502050	53505806	789624	7	134,103,96,73,118,202,406,	0,976,1662,2346,2647,3598,3940,
#Deleted in new
chr12	53502602	53505731	chr12:53502602-53505731	0	+	53502602	53502602	8553170	6	527,79,73,118,128,83,	0,1127,1794,2095,2532,3046,
#Deleted in new
chr12	53503473	53504719	chr12:53503473-53504719	0	+	53503473	53503473	8553170	3	335,73,22,	0,923,1224,
#Deleted in new
chr12	53503713	53504787	chr12:53503713-53504787	0	+	53503713	53503713	8553170	2	756,90,	0,984,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	53506687	53508220	chr12:53506687-53508220	0	-	53506687	53506687	8553170	2	206,1200,	0,333,
#Deleted in new
chr12	53506689	53507638	chr12:53506689-53507638	3	-	53506775	53507474	789624	3	204,122,266,	0,331,683,
#Partially deleted in new
chr12	53506690	53625979	chr12:53506690-53625979	3	-	53506857	53601000	789624	13	203,122,109,198,153,114,100,158,138,119,97,69,29,	0,330,16585,17873,25053,25819,26469,27811,30724,36639,45850,94262,119260,
#Partially deleted in new
chr12	53507855	53626370	chr12:53507855-53626370	1	-	53517136	53601000	789624	13	172,340,109,198,153,114,100,158,138,152,97,69,92,	0,9159,15420,16708,23888,24654,25304,26646,29559,35441,44685,93097,118423,
#Partially deleted in new
chr12	53512058	53626407	chr12:53512058-53626407	3	-	53517136	53601000	789624	12	5296,109,198,153,114,100,158,138,119,97,69,129,	0,11217,12505,19685,20451,21101,22443,25356,31271,40482,88894,114220,
#Partially deleted in new
chr12	53513441	53626000	chr12:53513441-53626000	1	-	53517136	53601000	789624	12	3913,109,198,153,114,100,158,138,119,97,69,50,	0,9834,11122,18302,19068,19718,21060,23973,29888,39099,87511,112509,
#Deleted in new
chr12	53513983	53517608	chr12:53513983-53517608	3	+	53513983	53513983	789624	3	68,129,2100,	0,369,1525,
#Partially deleted in new
chr12	53516648	53524976	chr12:53516648-53524976	0	-	53516648	53516648	8553170	4	706,109,198,112,	0,6627,7915,8216,
#Partially deleted in new
chr12	53531751	53621218	chr12:53531751-53621218	3	+	53531751	53531751	8553170	7	121,38,135,180,124,154,115,	0,3803,6454,54007,75687,86453,89352,
#Partially deleted in new
chr12	53534539	53626363	chr12:53534539-53626363	0	-	53534539	53537531	789624	5	120,138,119,69,85,	0,2875,8790,66413,91739,
#Partially deleted in new
chr12	53534541	53625979	chr12:53534541-53625979	0	-	53534541	53537531	789624	5	118,138,119,69,29,	0,2873,8788,66411,91409,
#Partially deleted in new
chr12	53534605	53625971	chr12:53534605-53625971	0	-	53534605	53601000	789624	6	54,138,152,97,69,21,	0,2809,8691,17935,66347,91345,
#Partially deleted in new
chr12	53542886	53625996	chr12:53542886-53625996	1	-	53543239	53601000	789624	4	562,97,69,46,	0,9654,58066,83064,
#Partially deleted in new
chr12	53542886	53626410	chr12:53542886-53626410	1	-	53543239	53601000	789624	4	562,97,69,132,	0,9654,58066,83392,
#Deleted in new
chr12	53543090	53543951	chr12:53543090-53543951	0	-	53543090	53543090	8553170	2	358,112,	0,749,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	53574631	53576103	chr12:53574631-53576103	7	+	53574631	53574631	16724991	2	287,520,	0,952,
#Partially deleted in new
chr12	53600751	53626387	chr12:53600751-53626387	0	-	53600751	53600751	8553170	2	270,109,	0,25527,
#Partially deleted in new
chr12	53632725	53669212	chr12:53632725-53669212	0	-	53632725	53632725	8553170	2	341,65,	0,36422,
#Partially deleted in new
chr12	53632787	53633151	chr12:53632787-53633151	7	-	53632787	53632787	16724991	1	364,	0,
#Partially deleted in new
chr12	53665165	53676325	chr12:53665165-53676325	1	-	53665313	53672614	789624	5	263,194,78,70,273,	0,3982,4705,7410,10887,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	53665170	53674021	chr12:53665170-53674021	0	-	53665170	53665170	8553170	4	258,194,78,1446,	0,3977,4700,7405,
#Partially deleted in new
chr12	53665182	53676398	chr12:53665182-53676398	1	-	53665313	53672614	789624	5	246,194,78,70,157,	0,3965,4688,7393,11059,
#Partially deleted in new
chr12	53665201	53677398	chr12:53665201-53677398	1	-	53665313	53676192	789624	5	227,194,78,70,1223,	0,3946,4669,7374,10974,
#Partially deleted in new
chr12	53665238	53676082	chr12:53665238-53676082	1	-	53665313	53665364	789624	5	190,194,244,70,30,	0,3909,4632,7337,10814,
#Partially deleted in new
chr12	53665313	53676192	chr12:53665313-53676192	1	-	53665313	53676192	789624	5	115,194,78,70,140,	0,3834,4557,7262,10739,
#Deleted in new
chr12	53669221	53670261	chr12:53669221-53670261	0	-	53669221	53669221	8553170	2	120,391,	0,649,
#Partially deleted in new
chr12	53708516	53727745	chr12:53708516-53727745	1	-	53711943	53725242	789624	15	3605,104,200,109,96,126,255,156,91,149,159,191,103,180,342,	0,4583,5184,5616,6081,6683,7276,7743,11222,12950,13508,15076,16128,16570,18887,
#Partially deleted in new
chr12	53711118	53727439	chr12:53711118-53727439	1	-	53711943	53725242	789624	14	1003,107,200,109,96,126,255,91,149,159,92,103,180,36,	0,1981,2582,3014,3479,4081,4674,8620,10348,10906,12474,13526,13968,16285,
#Partially deleted in new
chr12	53711118	53714629	chr12:53711118-53714629	0	-	53711943	53714629	789624	6	1003,72,107,200,109,32,	0,1656,1981,2582,3014,3479,
#Partially deleted in new
chr12	53711158	53727428	chr12:53711158-53727428	1	-	53713095	53725242	789624	14	2048,200,109,96,126,255,156,91,149,159,191,103,180,25,	0,2542,2974,3439,4041,4634,5101,8580,10308,10866,12434,13486,13928,16245,
#Partially deleted in new
chr12	53711789	53727440	chr12:53711789-53727440	3	-	53711943	53725242	789624	15	332,107,200,109,96,126,255,156,91,149,159,191,103,180,37,	0,1310,1911,2343,2808,3410,4003,4470,7949,9677,10235,11803,12855,13297,15614,
#Partially deleted in new
chr12	53713169	53727452	chr12:53713169-53727452	0	-	53713169	53713169	8553170	13	37,541,96,126,255,156,91,149,159,170,103,180,49,	0,531,1428,2030,2623,3090,6569,8297,8855,10423,11475,11917,14234,
#Deleted in new
chr12	53714136	53716349	chr12:53714136-53716349	0	-	53714136	53714136	8553170	4	105,96,126,557,	0,461,1063,1656,
#Partially deleted in new
chr12	53715674	53719778	chr12:53715674-53719778	0	-	53715674	53715674	8553170	3	373,156,40,	0,585,4064,
#Partially deleted in new
chr12	53719771	53727452	chr12:53719771-53727452	0	-	53719771	53719771	8553170	6	58,717,170,103,180,49,	0,1695,3821,4873,5315,7632,
#Partially deleted in new
chr12	53722139	53727452	chr12:53722139-53727452	0	-	53722139	53725242	789624	5	44,191,103,172,49,	0,1453,2505,2947,5264,
#Partially deleted in new
chr12	53722154	53727452	chr12:53722154-53727452	0	-	53722154	53725242	789624	5	29,191,103,177,49,	0,1438,2490,2932,5249,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	53722163	53725267	chr12:53722163-53725267	0	-	53722163	53722163	8553170	5	20,37,191,103,181,	0,736,1429,2481,2923,
#Partially deleted in new
chr12	53723549	53727452	chr12:53723549-53727452	0	-	53723549	53723549	8553170	4	234,103,180,49,	0,1095,1537,3854,
#Partially deleted in new
chr12	53723593	53727606	chr12:53723593-53727606	0	-	53723593	53725242	789624	5	190,103,180,70,203,	0,1051,1493,2096,3810,
#Partially deleted in new
chr12	53723620	53727451	chr12:53723620-53727451	0	-	53723620	53725242	789624	4	163,163,180,48,	0,964,1466,3783,
#Partially deleted in new
chr12	53723639	53727452	chr12:53723639-53727452	0	-	53723639	53725242	789624	5	144,103,180,91,49,	0,1005,1447,2604,3764,
#Partially deleted in new
chr12	53723682	53726340	chr12:53723682-53726340	0	-	53723682	53725242	789624	5	101,103,180,70,97,	0,962,1404,2007,2561,
#Partially deleted in new
chr12	53723695	53727457	chr12:53723695-53727457	0	-	53723695	53725242	789624	6	88,103,180,70,91,54,	0,949,1391,1994,2548,3708,
#Partially deleted in new
chr12	53723728	53726340	chr12:53723728-53726340	0	-	53723728	53725242	789624	5	55,103,180,70,141,	0,916,1358,1961,2471,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	53724043	53727467	chr12:53724043-53727467	0	-	53724043	53724043	8553170	4	208,103,180,64,	0,601,1043,3360,
#Deleted in new
chr12	53724403	53727491	chr12:53724403-53727491	0	-	53724403	53724403	8553170	3	344,180,88,	0,683,3000,
#Deleted in new
chr12	53724582	53727452	chr12:53724582-53727452	0	-	53724582	53724582	8553170	2	684,49,	0,2821,
#Deleted in new
chr12	53750446	53751835	chr12:53750446-53751835	1	-	53750446	53750446	789624	2	519,62,	0,1327,
#Partially deleted in new
chr12	53750838	53757034	chr12:53750838-53757034	3	-	53750838	53750838	789624	3	127,116,221,	0,4981,5975,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	53754357	53762104	chr12:53754357-53762104	3	+	53754357	53754357	8553170	2	152,277,	0,7470,
#Deleted in new
chr12	53816184	53816479	chr12:53816184-53816479	3	+	53816184	53816184	8553170	1	295,	0,
#Deleted in new
chr12	53935327	53939643	chr12:53935327-53939643	3	-	53935327	53935327	789624	3	1042,193,173,	0,1837,4143,
#Partially deleted in new
chr12	53938764	53946544	chr12:53938764-53946544	3	+	53938906	53945256	789624	2	878,1545,	0,6235,
#Deleted in new
chr12	53954833	53958956	chr12:53954833-53958956	3	+	53954929	53956566	789624	2	706,2629,	0,1494,
#Deleted in new
chr12	53962307	53974956	chr12:53962307-53974956	3	-	53962307	53962307	789624	7	1817,53,124,102,126,140,59,	0,1923,3656,3968,4961,6309,12590,
#Deleted in new
chr12	53963628	53963697	chr12:53963628-53963697	3	+	53963628	53963628	8553170	1	69,	0,
#Deleted in new
chr12	53963748	53974947	chr12:53963748-53974947	0	-	53963748	53963748	8553170	6	376,124,102,126,140,50,	0,2215,2527,3520,4868,11149,
#Deleted in new
chr12	53963801	53966630	chr12:53963801-53966630	0	-	53963801	53963801	8553170	4	323,124,102,23,	0,2162,2474,2806,
#Deleted in new
chr12	53963900	53967355	chr12:53963900-53967355	0	-	53963900	53963900	8553170	5	224,53,96,102,87,	0,330,2063,2375,3368,
#Deleted in new
chr12	53964084	53968914	chr12:53964084-53968914	0	-	53964084	53964084	789624	4	40,120,102,298,	0,1879,2191,4532,
#Deleted in new
chr12	53965964	53966061	chr12:53965964-53966061	3	+	53965964	53965964	8553170	1	97,	0,
#Deleted in new
chr12	53968001	53968178	chr12:53968001-53968178	3	+	53968001	53968001	8553170	1	177,	0,
#Deleted in new
chr12	53968350	53968501	chr12:53968350-53968501	3	+	53968350	53968350	8553170	1	151,	0,
#Deleted in new
chr12	53973125	53977643	chr12:53973125-53977643	3	+	53973241	53975413	789624	2	798,2463,	0,2055,
#Deleted in new
chr12	53973127	53976419	chr12:53973127-53976419	1	+	53973241	53975631	789624	2	800,1239,	0,2053,
#Deleted in new
chr12	53981508	53984324	chr12:53981508-53984324	0	-	53981508	53981508	8553170	1	2816,	0,
#Deleted in new
chr12	53983449	53984838	chr12:53983449-53984838	1	-	53983449	53983449	8553170	2	415,129,	0,1260,
#Deleted in new
chr12	53983670	53984758	chr12:53983670-53984758	1	-	53983670	53983670	8553170	2	484,49,	0,1039,
#Deleted in new
chr12	53983950	53985519	chr12:53983950-53985519	3	-	53983950	53983950	789624	3	204,120,44,	0,1013,1525,
#Deleted in new
chr12	53985064	53985977	chr12:53985064-53985977	0	+	53985595	53985977	789624	2	33,493,	0,420,
#Deleted in new
chr12	53985185	53990279	chr12:53985185-53990279	3	+	53985259	53989446	789624	2	825,1111,	0,3983,
#Deleted in new
chr12	53985844	54034888	chr12:53985844-54034888	3	+	53985844	54034492	789624	2	166,611,	0,48433,
#Deleted in new
chr12	53986131	53989993	chr12:53986131-53989993	0	+	53986131	53986131	8553170	2	62,825,	0,3037,
#Deleted in new
chr12	53986337	53989675	chr12:53986337-53989675	0	+	53986337	53986337	8553170	2	43,507,	0,2831,
#Deleted in new
chr12	53986429	53989710	chr12:53986429-53989710	0	+	53986429	53986429	8553170	2	257,542,	0,2739,
#Deleted in new
chr12	53990623	54028922	chr12:53990623-54028922	0	+	54028767	54028922	789624	2	191,347,	0,37952,
#Deleted in new
chr12	53991737	53991847	chr12:53991737-53991847	3	+	53991737	53991737	5263520	1	110,	0,
#Deleted in new
chr12	53993809	53995899	chr12:53993809-53995899	0	-	53993809	53993809	8553170	1	2090,	0,
#Deleted in new
chr12	53994894	54002888	chr12:53994894-54002888	0	+	53994894	53994894	8553170	2	122,459,	0,7535,
#Deleted in new
chr12	53994943	54029689	chr12:53994943-54029689	0	+	54028767	54029689	789624	3	73,226,59,	0,33752,34687,
#Deleted in new
chr12	53995207	53996785	chr12:53995207-53996785	3	-	53995207	53995207	789624	3	311,77,116,	0,625,1462,
#Deleted in new
chr12	53995508	54003298	chr12:53995508-54003298	3	+	54000188	54002674	0	3	41,595,869,	0,4623,6921,
#Deleted in new
chr12	53999021	54000010	chr12:53999021-54000010	3	-	53999021	53999021	789624	2	246,302,	0,687,
#Deleted in new
chr12	53999021	53999620	chr12:53999021-53999620	0	-	53999021	53999021	8553170	2	246,44,	0,555,
#Deleted in new
chr12	54000118	54003337	chr12:54000118-54003337	1	+	54000188	54002674	0	2	608,908,	0,2311,
#Deleted in new
chr12	54009105	54012362	chr12:54009105-54012362	3	+	54009284	54011381	789624	2	615,1274,	0,1983,
#Deleted in new
chr12	54015896	54030733	chr12:54015896-54030733	1	+	54028767	54029962	789624	3	1518,346,1079,	0,12679,13758,
#Partially deleted in new
chr12	54016930	54055327	chr12:54016930-54055327	3	+	54053922	54055205	789624	4	484,117,445,478,	0,36229,36986,37919,
#Deleted in new
chr12	54017109	54035361	chr12:54017109-54035361	3	+	54017109	54017109	789624	2	305,1084,	0,17168,
#Deleted in new
chr12	54019909	54022589	chr12:54019909-54022589	3	+	54019909	54019909	8553170	1	2680,	0,
#Deleted in new
chr12	54028357	54030823	chr12:54028357-54030823	3	+	54028521	54029962	789624	2	564,1169,	0,1297,
#Deleted in new
chr12	54032852	54035358	chr12:54032852-54035358	3	+	54033122	54034492	789624	2	724,1081,	0,1425,
#Deleted in new
chr12	54033949	54034045	chr12:54033949-54034045	3	+	54033949	54033949	5263520	1	96,	0,
#Partially deleted in new
chr12	54037853	54053424	chr12:54037853-54053424	0	+	54037853	54037853	8553170	3	161,149,265,	0,9915,15306,
#Deleted in new
chr12	54053876	54056030	chr12:54053876-54056030	1	+	54053922	54055205	789624	2	485,1181,	0,973,
#Duplicated in new
chr12	54058253	54122234	chr12:54058253-54122234	3	+	54058253	54058253	5263520	2	311,3631,	0,60350,
#Deleted in new
chr12	54076837	54081903	chr12:54076837-54081903	7	-	54076837	54076837	16724991	3	164,236,164,	0,435,4902,
#Deleted in new
chr12	54078922	54081823	chr12:54078922-54081823	4	-	54078922	54078922	16724991	3	518,118,185,	0,1304,2716,
#Deleted in new
chr12	54078922	54080433	chr12:54078922-54080433	4	-	54078922	54078922	16724991	2	518,207,	0,1304,
#Deleted in new
chr12	54079266	54080288	chr12:54079266-54080288	5	-	54079266	54079266	16724991	2	174,62,	0,960,
#Partially deleted in new
chr12	54082117	54102693	chr12:54082117-54102693	3	+	54082117	54082117	5263520	2	48,480,	0,20096,
#Partially deleted in new
chr12	54085131	54125830	chr12:54085131-54125830	3	-	54085131	54085131	8553170	3	276,152,71,	0,36172,40628,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	54114012	54125891	chr12:54114012-54125891	1	-	54114012	54114012	8553170	4	135,300,152,132,	0,715,7291,11747,
#Partially deleted in new
chr12	54121275	54125894	chr12:54121275-54125894	0	-	54121275	54121275	8553170	2	172,135,	0,4484,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	54121276	54173229	chr12:54121276-54173229	0	-	54121276	54121276	8553170	6	171,235,105,85,58,439,	0,8241,44097,50748,51099,51514,
#Partially deleted in new
chr12	54121278	54125992	chr12:54121278-54125992	0	-	54121278	54121278	8553170	2	177,233,	0,4481,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	54121278	54189008	chr12:54121278-54189008	0	-	54175066	54183940	789624	9	177,105,85,58,121,120,304,87,58,	0,44095,50746,51097,53748,61225,62377,66540,67672,
#Partially deleted in new
chr12	54126097	54132843	chr12:54126097-54132843	1	+	54126097	54126097	5263520	2	515,854,	0,5892,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	54126212	54142493	chr12:54126212-54142493	3	+	54126212	54126212	8553170	3	400,199,742,	0,14033,15539,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	54142590	54147485	chr12:54142590-54147485	3	+	54142590	54142590	8553170	4	231,103,210,1190,	0,1391,2239,3705,
#Deleted in new
chr12	54145068	54147225	chr12:54145068-54147225	3	-	54145068	54145068	8553170	1	2157,	0,
#Partially deleted in new
chr12	54162064	54164452	chr12:54162064-54164452	3	-	54162064	54162064	8553170	2	719,35,	0,2353,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	54163138	54168595	chr12:54163138-54168595	3	+	54163138	54163138	8553170	3	70,23,310,	0,1860,5147,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	54164744	54183933	chr12:54164744-54183933	0	-	54172076	54183933	789624	5	33,105,85,120,278,	0,629,7280,17759,18911,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	54180357	54188957	chr12:54180357-54188957	1	-	54181518	54183940	789624	6	1290,120,304,87,86,232,	0,2146,3298,7461,8153,8368,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	54181274	54188994	chr12:54181274-54188994	3	-	54182095	54183940	789624	3	1349,304,44,	0,2381,7676,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	54181452	54182759	chr12:54181452-54182759	0	-	54181452	54181452	8553170	2	195,256,	0,1051,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	54181452	54188940	chr12:54181452-54188940	1	-	54181518	54183940	789624	5	195,120,304,87,220,	0,1051,2203,6366,7268,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	54181467	54188974	chr12:54181467-54188974	1	-	54182095	54183940	789624	4	1156,304,87,24,	0,2188,6351,7483,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	54181470	54188976	chr12:54181470-54188976	1	-	54181518	54183940	789624	4	177,120,304,26,	0,1033,2185,7480,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	54181484	54187906	chr12:54181484-54187906	0	-	54181484	54181484	8553170	3	1139,195,88,	0,2280,6334,
#Partially deleted in new
chr12	54182071	54188980	chr12:54182071-54188980	1	-	54182095	54183940	789624	4	99,120,304,30,	0,432,1584,6879,
#Partially deleted in new
chr12	54182097	54188985	chr12:54182097-54188985	0	-	54182097	54182097	8553170	2	526,35,	0,6853,
#Partially deleted in new
chr12	54182557	54184296	chr12:54182557-54184296	0	-	54182557	54182557	8553170	2	66,532,	0,1207,
#Partially deleted in new
chr12	54183416	54188992	chr12:54183416-54188992	0	-	54183416	54183416	8553170	2	543,42,	0,5534,
#Partially deleted in new
chr12	54183653	54188946	chr12:54183653-54188946	0	-	54183653	54183940	789624	3	306,84,80,	0,4165,5213,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	54183694	54188974	chr12:54183694-54188974	0	-	54183694	54183940	789624	4	265,165,87,24,	0,3152,4124,5256,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	54186982	54188957	chr12:54186982-54188957	0	-	54186982	54186982	8553170	3	29,22,443,	0,836,1532,
#Partially deleted in new
chr12	54187213	54188957	chr12:54187213-54188957	0	-	54187213	54187213	8553170	3	82,87,281,	0,605,1463,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	54230939	54280102	chr12:54230939-54280102	3	-	54241754	54257650	0	5	10966,101,187,179,95,	0,15175,21101,26574,49068,
#Deleted in new
chr12	54231396	54231476	chr12:54231396-54231476	3	-	54231396	54231396	5263520	1	80,	0,
#Partially deleted in new
chr12	54240624	54259592	chr12:54240624-54259592	1	-	54241754	54257650	0	5	1281,101,187,179,84,	0,5490,11416,16889,18884,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	54241746	54252525	chr12:54241746-54252525	0	-	54241746	54241746	8553170	3	159,101,485,	0,4368,10294,
#Partially deleted in new
chr12	54241754	54259545	chr12:54241754-54259545	1	-	54241754	54257650	0	5	151,101,187,179,276,	0,4360,10286,15759,17515,
#Partially deleted in new
chr12	54252090	54258427	chr12:54252090-54258427	0	-	54252090	54257650	789624	3	137,179,359,	0,5423,5978,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	54255626	54255910	chr12:54255626-54255910	3	-	54255626	54255626	8553170	1	284,	0,
#Partially deleted in new
chr12	54262614	54279063	chr12:54262614-54279063	3	+	54262614	54262614	8553170	2	323,412,	0,16037,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	54271840	54280133	chr12:54271840-54280133	0	-	54271840	54271840	8553170	2	2501,126,	0,8167,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	54276630	54345083	chr12:54276630-54345083	3	+	54276630	54276630	8553170	2	545,22,	0,68431,
#Deleted in new
chr12	54280192	54287087	chr12:54280192-54287087	3	+	54280807	54284313	0	10	630,117,147,211,93,93,75,156,60,2539,	0,1193,1602,1897,2201,2380,2607,3619,4065,4356,
#Deleted in new
chr12	54280747	54287088	chr12:54280747-54287088	0	+	54280807	54284313	0	11	75,117,147,211,93,93,75,156,60,71,136,	0,638,1047,1342,1646,1825,2052,3064,3510,5914,6205,
#Deleted in new
chr12	54280747	54283878	chr12:54280747-54283878	0	+	54280807	54283878	789624	6	75,117,147,49,75,67,	0,638,1047,1342,2052,3064,
#Deleted in new
chr12	54280748	54282472	chr12:54280748-54282472	0	+	54280748	54280748	8553170	4	74,556,211,79,	0,637,1341,1645,
#Deleted in new
chr12	54280754	54285214	chr12:54280754-54285214	1	+	54280807	54284313	0	11	68,117,147,211,93,93,75,156,156,60,666,	0,631,1040,1335,1639,1818,2045,2324,3057,3503,3794,
#Deleted in new
chr12	54280762	54282486	chr12:54280762-54282486	0	+	54280807	54282486	789624	4	60,117,211,93,	0,623,1327,1631,
#Deleted in new
chr12	54280774	54284881	chr12:54280774-54284881	1	+	54280807	54284313	789624	10	48,117,147,211,93,97,32,156,60,333,	0,611,1020,1315,1619,1798,2068,3037,3483,3774,
#Deleted in new
chr12	54280779	54285251	chr12:54280779-54285251	1	+	54280807	54284313	0	9	43,117,147,211,93,24,141,60,703,	0,606,1015,1310,1614,1793,3047,3478,3769,
#Deleted in new
chr12	54281005	54282626	chr12:54281005-54282626	0	+	54281022	54282626	789624	6	89,117,147,211,93,54,	0,380,789,1084,1388,1567,
#Deleted in new
chr12	54281185	54282284	chr12:54281185-54282284	0	+	54281797	54282284	789624	4	110,117,147,195,	0,200,609,904,
#Deleted in new
chr12	54282197	54284569	chr12:54282197-54284569	0	+	54282197	54284313	789624	6	103,93,93,75,156,312,	0,196,375,602,1614,2060,
#Deleted in new
chr12	54283722	54284371	chr12:54283722-54284371	0	+	54283722	54283722	8553170	2	245,114,	0,535,
#Deleted in new
chr12	54285906	54287051	chr12:54285906-54287051	0	+	54285906	54285906	8553170	2	826,99,	0,1046,
#Deleted in new
chr12	54285946	54287087	chr12:54285946-54287087	0	+	54285946	54285946	8553170	3	166,71,135,	0,715,1006,
#Partially deleted in new
chr12	54292110	54295760	chr12:54292110-54295760	1	-	54292373	54295248	0	3	1271,170,217,	0,3024,3433,
#Partially deleted in new
chr12	54292110	54301121	chr12:54292110-54301121	3	-	54292373	54295248	0	3	1271,170,321,	0,3024,8690,
#Partially deleted in new
chr12	54292172	54295758	chr12:54292172-54295758	1	-	54292373	54295248	0	2	1209,624,	0,2962,
#Partially deleted in new
chr12	54292373	54301015	chr12:54292373-54301015	1	-	54292373	54295248	0	4	1008,170,130,215,	0,2761,7773,8427,
#Partially deleted in new
chr12	54292464	54297884	chr12:54292464-54297884	0	-	54292464	54295248	789624	3	917,170,121,	0,2670,5299,
#Partially deleted in new
chr12	54301201	54345475	chr12:54301201-54345475	0	+	54325163	54345475	789624	6	179,99,69,82,92,16,	0,23881,39345,41004,42023,44258,
#Partially deleted in new
chr12	54301219	54343279	chr12:54301219-54343279	0	+	54301219	54301219	8553170	4	161,69,82,55,	0,39327,40986,42005,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	54317780	54317887	chr12:54317780-54317887	3	-	54317780	54317780	8553170	1	107,	0,
#Partially deleted in new
chr12	54325108	54342630	chr12:54325108-54342630	0	+	54325108	54325108	8553170	3	73,69,425,	0,15438,17097,
#Partially deleted in new
chr12	54325126	54351849	chr12:54325126-54351849	3	+	54325163	54350523	0	9	55,69,82,92,56,78,52,39,1374,	0,15420,17079,18098,20333,22640,22873,24493,25349,
#Partially deleted in new
chr12	54325128	54351102	chr12:54325128-54351102	1	+	54340504	54350523	0	9	53,153,82,92,56,78,52,39,627,	0,15334,17077,18096,20331,22638,22871,24491,25347,
#Partially deleted in new
chr12	54325130	54350590	chr12:54325130-54350590	0	+	54325163	54347829	789624	8	51,69,82,92,78,52,39,115,	0,15416,17075,18094,22636,22869,24489,25345,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	54325130	54350690	chr12:54325130-54350690	1	+	54325163	54350523	789624	10	51,69,82,92,56,63,78,52,39,215,	0,15416,17075,18094,20329,21481,22636,22869,24489,25345,
#Partially deleted in new
chr12	54325138	54350913	chr12:54325138-54350913	1	+	54325163	54350523	0	8	43,82,92,56,78,52,39,438,	0,17067,18086,20321,22628,22861,24481,25337,
#Partially deleted in new
chr12	54325138	54348132	chr12:54325138-54348132	0	+	54325138	54325138	8553170	7	43,69,82,92,56,78,133,	0,15408,17067,18086,20321,22628,22861,
#Partially deleted in new
chr12	54325138	54351082	chr12:54325138-54351082	0	+	54325163	54347829	789624	8	43,69,82,56,78,52,39,607,	0,15408,17067,20321,22628,22861,24481,25337,
#Partially deleted in new
chr12	54325138	54347972	chr12:54325138-54347972	0	+	54325138	54325138	8553170	6	43,69,82,92,56,206,	0,15408,17067,18086,20321,22628,
#Partially deleted in new
chr12	54325138	54350590	chr12:54325138-54350590	1	+	54325163	54350523	0	8	43,69,82,92,56,78,40,115,	0,15408,17067,18086,20321,22628,22861,25337,
#Partially deleted in new
chr12	54325138	54350354	chr12:54325138-54350354	1	+	54325163	54350323	789624	8	43,82,92,56,78,52,39,109,	0,17067,18086,20321,22628,22861,24481,25107,
#Partially deleted in new
chr12	54325143	54350879	chr12:54325143-54350879	1	+	54325163	54350523	789624	7	38,69,56,78,52,39,404,	0,15403,20316,22623,22856,24476,25332,
#Partially deleted in new
chr12	54325150	54350621	chr12:54325150-54350621	1	+	54325163	54349664	789624	8	31,69,82,92,56,78,52,1002,	0,15396,17055,18074,20309,22616,22849,24469,
#Partially deleted in new
chr12	54325201	54350578	chr12:54325201-54350578	0	+	54325201	54325201	8553170	8	75,69,82,56,78,52,39,103,	0,15345,17004,20258,22565,22798,24418,25274,
#Partially deleted in new
chr12	54325583	54350686	chr12:54325583-54350686	1	+	54345462	54350523	789624	9	99,69,82,92,56,78,52,39,211,	0,14963,16622,17641,19876,22183,22416,24036,24892,
#Deleted in new
chr12	54337215	54337314	chr12:54337215-54337314	3	+	54337215	54337215	5263520	1	99,	0,
#Partially deleted in new
chr12	54340371	54347840	chr12:54340371-54347840	0	+	54340504	54347840	789624	5	244,82,92,56,74,	0,1834,2853,5088,7395,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	54344609	54344876	chr12:54344609-54344876	3	+	54344609	54344609	8553170	1	267,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	54353660	54497688	chr12:54353660-54497688	3	+	54353660	54353660	8553170	4	47,69,82,366,	0,74196,83171,143662,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	54353791	54466985	chr12:54353791-54466985	3	+	54353791	54353791	789624	4	105,110,186,145,	0,53605,55758,113049,
#Deleted in new
chr12	54362444	54364474	chr12:54362444-54364474	1	-	54362660	54363851	789624	2	1415,82,	0,1948,
#Deleted in new
chr12	54362446	54364487	chr12:54362446-54364487	3	-	54362660	54363851	789624	1	2041,	0,
#Partially deleted in new
chr12	54369132	54385767	chr12:54369132-54385767	1	-	54370255	54384514	789624	8	1354,96,170,243,163,111,137,95,	0,1493,1794,2340,4840,6711,15295,16540,
#Partially deleted in new
chr12	54369134	54391281	chr12:54369134-54391281	1	-	54370255	54391244	789624	7	1352,96,170,163,111,137,47,	0,1491,1792,4838,6709,15293,22100,
#Partially deleted in new
chr12	54369135	54384723	chr12:54369135-54384723	1	-	54370255	54384514	789624	7	1351,96,170,243,163,111,296,	0,1490,1791,2337,4837,6708,15292,
#Partially deleted in new
chr12	54369139	54391298	chr12:54369139-54391298	3	-	54370255	54391244	789624	8	1347,96,170,243,163,111,137,64,	0,1486,1787,2333,4833,6704,15288,22095,
#Partially deleted in new
chr12	54369139	54384469	chr12:54369139-54384469	0	-	54371616	54384469	789624	7	1347,96,170,170,163,111,42,	0,1486,1787,2333,4833,6704,15288,
#Partially deleted in new
chr12	54369152	54385768	chr12:54369152-54385768	1	-	54370255	54384514	789624	9	1334,96,170,243,163,111,137,144,96,	0,1473,1774,2320,4820,6691,15275,15706,16520,
#Partially deleted in new
chr12	54369877	54379189	chr12:54369877-54379189	0	-	54369877	54369877	8553170	7	609,96,170,243,163,111,124,	0,748,1049,1595,4095,5966,9188,
#Partially deleted in new
chr12	54370161	54384673	chr12:54370161-54384673	1	-	54370255	54384514	789624	6	325,96,170,163,111,246,	0,464,765,3811,5682,14266,
#Partially deleted in new
chr12	54371005	54385264	chr12:54371005-54385264	0	-	54371005	54384514	789624	6	91,243,163,111,137,30,	0,467,2967,4838,13422,14229,
#Partially deleted in new
chr12	54371490	54391281	chr12:54371490-54391281	0	-	54371490	54391244	789624	4	225,163,137,47,	0,2482,12937,19744,
#Partially deleted in new
chr12	54371582	54384723	chr12:54371582-54384723	0	-	54371582	54384514	789624	5	133,163,111,137,24,	0,2390,4261,12845,13117,
#Partially deleted in new
chr12	54371641	54391298	chr12:54371641-54391298	0	-	54371641	54384514	789624	5	74,163,111,133,64,	0,2331,4202,12786,19593,
#Partially deleted in new
chr12	54371683	54384709	chr12:54371683-54384709	0	-	54371683	54384514	789624	3	32,163,282,	0,2289,12744,
#Partially deleted in new
chr12	54395260	54419460	chr12:54395260-54419460	3	-	54396292	54419198	0	30	1116,123,102,114,84,150,106,81,80,93,151,68,138,155,56,102,46,192,209,53,57,44,45,126,46,62,121,113,131,480,	0,2104,3336,4384,4603,5585,6112,6324,6515,6740,6919,7722,7926,8364,8650,8884,9169,9442,9905,10403,10609,12388,12571,12849,13495,13632,13971,14224,16573,23720,
#Partially deleted in new
chr12	54395260	54406116	chr12:54395260-54406116	0	-	54395260	54395260	8553170	17	1116,123,102,1351,106,81,80,93,151,68,593,56,102,465,209,53,247,	0,2104,3336,4384,6112,6324,6515,6740,6919,7722,7926,8650,8884,9169,9905,10403,10609,
#Partially deleted in new
chr12	54395894	54399913	chr12:54395894-54399913	0	-	54396292	54399913	789624	4	482,123,102,50,	0,1470,2702,3969,
#Partially deleted in new
chr12	54396221	54398823	chr12:54396221-54398823	0	-	54396221	54396221	8553170	3	155,123,227,	0,1143,2375,
#Partially deleted in new
chr12	54397270	54399913	chr12:54397270-54399913	0	-	54397270	54397270	8553170	3	217,102,269,	0,1326,2374,
#Partially deleted in new
chr12	54397365	54400858	chr12:54397365-54400858	0	-	54397365	54397365	8553170	4	122,102,114,995,	0,1231,2279,2498,
#Deleted in new
chr12	54401559	54402272	chr12:54401559-54402272	0	-	54401559	54401559	8553170	2	296,272,	0,441,
#Partially deleted in new
chr12	54402080	54403172	chr12:54402080-54403172	0	-	54402080	54402080	8553170	3	13,151,190,	0,99,902,
#Deleted in new
chr12	54403631	54404344	chr12:54403631-54404344	0	-	54403631	54403631	8553170	2	148,434,	0,279,
#Deleted in new
chr12	54403915	54404629	chr12:54403915-54404629	0	-	54403915	54403915	8553170	2	51,485,	0,229,
#Partially deleted in new
chr12	54404770	54419220	chr12:54404770-54419220	0	-	54409269	54419198	789624	12	124,209,53,57,44,45,126,46,62,121,113,240,	0,395,893,1099,2878,3061,3339,3985,4122,4461,4714,14210,
#Partially deleted in new
chr12	54405193	54419127	chr12:54405193-54419127	0	-	54409269	54419127	789624	11	181,53,57,44,45,126,46,62,121,131,147,	0,470,676,2455,2638,2916,3562,3699,4038,6640,13787,
#Partially deleted in new
chr12	54411907	54413428	chr12:54411907-54413428	0	-	54411907	54411907	8553170	3	57,206,284,	0,403,1237,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	54419784	54437104	chr12:54419784-54437104	1	+	54419784	54419784	789624	3	169,69,273,	0,8072,17047,
#Deleted in new
chr12	54428302	54429403	chr12:54428302-54429403	3	+	54428302	54428302	8553170	2	350,104,	0,997,
#Partially deleted in new
chr12	54455949	54473549	chr12:54455949-54473549	0	-	54459409	54471248	789624	10	204,37,141,95,64,84,127,101,45,4,	0,3139,3363,4427,6159,6692,7221,9117,15283,17596,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	54455953	54472627	chr12:54455953-54472627	1	-	54459108	54471248	789624	9	200,37,95,64,84,127,101,45,868,	0,3135,4423,6155,6688,7217,9113,15279,15806,
#Partially deleted in new
chr12	54455956	54473599	chr12:54455956-54473599	3	-	54459108	54471248	789624	9	197,37,95,64,84,127,101,45,54,	0,3132,4420,6152,6685,7214,9110,15276,17589,
#Partially deleted in new
chr12	54455959	54473570	chr12:54455959-54473570	0	-	54455959	54455959	8553170	8	194,37,95,64,84,127,45,25,	0,3129,4417,6149,6682,7211,15273,17586,
#Partially deleted in new
chr12	54455960	54459602	chr12:54455960-54459602	0	-	54455960	54455960	8553170	3	193,37,290,	0,3128,3352,
#Partially deleted in new
chr12	54456138	54463333	chr12:54456138-54463333	0	-	54456138	54456138	8553170	6	15,37,95,64,84,163,	0,2950,4238,5970,6503,7032,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	54464696	54468947	chr12:54464696-54468947	0	-	54464696	54464696	8553170	2	471,123,	0,4128,
#Partially deleted in new
chr12	54464702	54473602	chr12:54464702-54473602	0	-	54464702	54464702	8553170	3	465,45,57,	0,6530,8843,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	54468924	54472644	chr12:54468924-54472644	0	-	54468924	54468924	8553170	3	29,45,501,	0,2308,3219,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr12	54497710	54548238	chr12:54497710-54548238	3	+	54497789	54542685	789624	31	181,111,93,57,143,91,138,49,157,57,97,110,133,82,59,146,133,120,146,132,219,131,98,94,83,81,94,117,110,90,5664,	0,1644,2822,10142,10678,11958,12137,14092,14238,18528,19185,19822,20095,20940,21203,21476,22983,23408,25683,26114,28817,30536,33549,33780,34032,34459,37393,38418,39233,41173,44864,
#Partially deleted in new
chr12	54497757	54542773	chr12:54497757-54542773	0	+	54497789	54518607	789624	31	134,111,93,57,143,91,138,49,157,57,97,110,133,137,59,146,133,120,146,132,219,131,98,94,83,81,94,117,110,90,199,	0,1597,2775,10095,10631,11911,12090,14045,14191,18481,19138,19775,20048,20838,21156,21429,22936,23361,25636,26067,28770,30489,33502,33733,33985,34412,37346,38371,39186,41126,44817,
#Partially deleted in new
chr12	54497765	54500931	chr12:54497765-54500931	0	+	54497765	54497765	8553170	3	126,111,399,	0,1589,2767,
#Partially deleted in new
chr12	54498783	54542963	chr12:54498783-54542963	1	+	54499402	54542685	789624	31	52,111,93,57,143,91,138,49,157,57,97,110,133,82,59,146,133,120,146,132,219,131,98,94,83,81,94,117,110,90,389,	0,571,1749,9069,9605,10885,11064,13019,13165,17455,18112,18749,19022,19867,20130,20403,21910,22335,24610,25041,27744,29463,32476,32707,32959,33386,36320,37345,38160,40100,43791,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	54509934	54512556	chr12:54509934-54512556	0	+	54509934	54509934	8553170	3	51,49,608,	0,1868,2014,
#Partially deleted in new
chr12	54518836	54520826	chr12:54518836-54520826	0	+	54518836	54518836	8553170	2	496,133,	0,1857,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	54532206	54536552	chr12:54532206-54536552	0	+	54532206	54532206	8553170	3	44,94,424,	0,2897,3922,
#Deleted in new
chr12	54543110	54544105	chr12:54543110-54544105	3	-	54543110	54543110	8553170	2	458,119,	0,876,
#Partially deleted in new
chr12	54549349	54579239	chr12:54549349-54579239	3	+	54549872	54577328	0	16	423,126,114,183,67,117,141,101,126,102,121,82,109,131,121,1380,	0,510,17624,19834,20196,20891,23251,23798,24005,24258,25748,26201,26642,27221,27875,28510,
#Partially deleted in new
chr12	54549603	54569241	chr12:54549603-54569241	0	+	54549872	54554256	789624	5	169,126,161,114,58,	0,256,4613,17370,19580,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	54549623	54574974	chr12:54549623-54574974	0	+	54549623	54549623	8553170	9	149,126,114,183,67,2501,101,126,1367,	0,236,17350,19560,19922,20617,23524,23731,23984,
#Partially deleted in new
chr12	54549667	54578260	chr12:54549667-54578260	0	+	54549872	54570277	789624	16	105,126,114,245,67,117,141,101,126,102,121,82,109,131,121,401,	0,192,17306,19454,19878,20573,22933,23480,23687,23940,25430,25883,26324,26903,27557,28192,
#Partially deleted in new
chr12	54550079	54577929	chr12:54550079-54577929	1	+	54566983	54577328	789624	15	126,114,183,67,117,141,101,126,102,121,82,109,131,121,70,	0,16894,19104,19466,20161,22521,23068,23275,23528,25018,25471,25912,26491,27145,27780,
#Partially deleted in new
chr12	54561443	54579239	chr12:54561443-54579239	0	+	54561443	54561443	8553170	15	194,114,86,67,117,141,101,126,102,121,82,109,131,121,1380,	0,5530,7837,8102,8797,11157,11704,11911,12164,13654,14107,14548,15127,15781,16416,
#Partially deleted in new
chr12	54561456	54578313	chr12:54561456-54578313	1	+	54561584	54577328	0	15	181,114,183,67,117,141,101,126,102,121,82,109,131,121,454,	0,5517,7727,8089,8784,11144,11691,11898,12151,13641,14094,14535,15114,15768,16403,
#Partially deleted in new
chr12	54561500	54579239	chr12:54561500-54579239	0	+	54561500	54561500	8553170	13	137,114,117,141,101,126,102,121,82,109,131,121,1380,	0,5473,8740,11100,11647,11854,12107,13597,14050,14491,15070,15724,16359,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	54574756	54577236	chr12:54574756-54577236	0	+	54574756	54574756	8553170	5	462,82,109,131,12,	0,794,1235,1814,2468,
#Deleted in new
chr12	54575386	54588516	chr12:54575386-54588516	1	-	54577387	54588488	789624	6	2156,17,107,38,61,112,	0,4989,5557,7824,8873,13018,
#Deleted in new
chr12	54579247	54588659	chr12:54579247-54588659	3	-	54580386	54588488	789624	7	1145,107,156,64,38,61,255,	0,1696,2728,3484,3963,5012,9157,
#Deleted in new
chr12	54580111	54584316	chr12:54580111-54584316	0	-	54580386	54584316	789624	5	281,107,64,38,57,	0,832,2620,3099,4148,
#Deleted in new
chr12	54580254	54588515	chr12:54580254-54588515	0	-	54582119	54588488	789624	6	98,107,156,38,61,111,	0,689,1721,2956,4005,8150,
#Deleted in new
chr12	54608186	54610462	chr12:54608186-54610462	5	-	54608186	54608186	16724991	3	225,45,283,	0,1446,1993,
#Deleted in new
chr12	54608186	54610462	chr12:54608186-54610462	7	-	54608186	54608186	16724991	4	225,228,45,283,	0,432,1446,1993,
#Deleted in new
chr12	54608232	54610429	chr12:54608232-54610429	4	-	54608232	54608232	16724991	3	179,72,258,	0,1373,1939,
#Deleted in new
chr12	54608232	54610429	chr12:54608232-54610429	4	-	54608232	54608232	16724991	4	179,194,45,250,	0,420,1400,1947,
#Deleted in new
chr12	54608272	54610405	chr12:54608272-54610405	5	-	54608272	54608272	16724991	3	127,94,64,	0,381,2069,
#Partially deleted in new
chr12	54630810	54633201	chr12:54630810-54633201	0	-	54630943	54633201	789624	4	143,85,141,22,	0,911,1430,2369,
#Partially deleted in new
chr12	54630810	54634880	chr12:54630810-54634880	1	-	54630891	54634841	789624	5	143,69,141,54,97,	0,927,1430,2369,3973,
#Partially deleted in new
chr12	54630811	54634895	chr12:54630811-54634895	3	-	54630891	54634841	789624	5	142,102,141,54,112,	0,926,1429,2368,3972,
#Partially deleted in new
chr12	54631926	54634887	chr12:54631926-54634887	0	-	54631926	54631926	8553170	3	455,54,104,	0,1253,2857,
#Deleted in new
chr12	54644590	54648493	chr12:54644590-54648493	1	-	54644712	54648303	0	5	166,90,102,39,248,	0,582,1015,2530,3655,
#Deleted in new
chr12	54644629	54648493	chr12:54644629-54648493	3	-	54644743	54648303	0	6	127,64,90,102,39,248,	0,254,543,976,2491,3616,
#Deleted in new
chr12	54644629	54648493	chr12:54644629-54648493	0	-	54646013	54648303	0	6	127,90,102,167,39,248,	0,543,976,1354,2491,3616,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	54682972	54687434	chr12:54682972-54687434	3	+	54682972	54682972	8553170	3	140,205,355,	0,2096,4107,
#Deleted in new
chr12	54802745	54803589	chr12:54802745-54803589	7	-	54802745	54802745	16724991	1	844,	0,
#Partially deleted in new
chr12	54839368	54858387	chr12:54839368-54858387	1	+	54839404	54858242	789624	4	79,42,123,195,	0,15747,17401,18824,
#Deleted in new
chr12	54854515	54855480	chr12:54854515-54855480	0	+	54854515	54854515	8553170	2	125,365,	0,600,
#Deleted in new
chr12	54854536	54858393	chr12:54854536-54858393	3	+	54854582	54858242	789624	4	104,42,123,201,	0,579,2233,3656,
#Deleted in new
chr12	54854582	54858242	chr12:54854582-54858242	1	+	54854582	54858242	789624	5	58,42,39,54,50,	0,533,2187,2256,3610,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	54948017	54973930	chr12:54948017-54973930	1	-	54961168	54966084	789624	9	2373,100,812,209,99,37,54,50,454,	0,13150,14413,15724,18035,18370,19165,19825,25459,
#Partially deleted in new
chr12	54949950	54973583	chr12:54949950-54973583	0	-	54963232	54966084	789624	9	440,100,808,166,99,37,54,50,107,	0,11217,12480,13834,16102,16437,17232,17892,23526,
#Partially deleted in new
chr12	54950077	54962697	chr12:54950077-54962697	0	-	54950207	54962697	789624	2	313,267,	0,12353,
#Partially deleted in new
chr12	54950079	54973683	chr12:54950079-54973683	1	-	54961168	54966084	789624	9	311,100,812,209,99,37,54,171,207,	0,11088,12351,13662,15973,16308,17103,17763,23397,
#Partially deleted in new
chr12	54950080	54984672	chr12:54950080-54984672	3	-	54961168	54974562	789624	11	310,100,812,209,99,37,54,50,43,208,88,	0,11087,12350,13661,15972,16307,17102,17762,23396,24319,34504,
#Partially deleted in new
chr12	54950169	54981838	chr12:54950169-54981838	1	-	54961168	54974562	789624	11	221,100,812,209,99,37,54,50,43,208,65,	0,10998,12261,13572,15883,16218,17013,17673,23307,24230,31604,
#Partially deleted in new
chr12	54950329	54973558	chr12:54950329-54973558	0	-	54950329	54966084	789624	7	61,209,99,37,54,50,82,	0,13412,15723,16058,16853,17513,23147,
#Partially deleted in new
chr12	54950353	54973686	chr12:54950353-54973686	1	-	54961168	54966084	789624	10	37,100,812,209,99,37,54,50,43,76,	0,10814,12077,13388,15699,16034,16829,17489,23123,23257,
#Partially deleted in new
chr12	54963142	54973602	chr12:54963142-54973602	0	-	54963142	54963142	8553170	6	100,209,37,54,50,126,	0,599,3245,4040,4700,10334,
#Partially deleted in new
chr12	54963740	54973554	chr12:54963740-54973554	0	-	54963740	54966084	789624	6	210,99,37,54,104,78,	0,2312,2647,3442,4102,9736,
#Partially deleted in new
chr12	54963800	54973723	chr12:54963800-54973723	0	-	54963800	54966084	789624	7	150,99,37,54,50,59,113,	0,2252,2587,3382,4042,9676,9810,
#Partially deleted in new
chr12	54963858	54974558	chr12:54963858-54974558	0	-	54967973	54974558	789624	7	92,99,37,54,171,43,159,	0,2194,2529,3324,3984,9618,10541,
#Partially deleted in new
chr12	54967852	54984731	chr12:54967852-54984731	0	-	54967852	54974562	789624	6	40,43,208,172,173,147,	0,5624,6547,13921,16141,16732,
#Partially deleted in new
chr12	54974419	54984746	chr12:54974419-54984746	0	-	54974419	54974562	789624	3	188,173,162,	0,9574,10165,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	55009745	55014247	chr12:55009745-55014247	3	+	55009745	55009745	8553170	3	271,91,230,	0,478,4272,
#Partially deleted in new
chr12	55019944	55030014	chr12:55019944-55030014	3	+	55026439	55027435	789624	2	369,3584,	0,6486,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	55113076	55118632	chr12:55113076-55118632	7	+	55113076	55113076	16724991	2	108,3109,	0,2447,
#Partially deleted in new
chr12	55115532	55116473	chr12:55115532-55116473	5	+	55115532	55115532	16724991	1	941,	0,
#Partially deleted in new
chr12	55122667	55124120	chr12:55122667-55124120	7	-	55122667	55122667	16724991	1	1453,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	55126405	55132750	chr12:55126405-55132750	3	+	55129834	55130776	789624	3	111,84,2925,	0,422,3420,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	55126405	55132750	chr12:55126405-55132750	0	+	55126405	55126405	8553170	3	111,84,325,	0,422,6020,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	55126405	55132750	chr12:55126405-55132750	0	+	55126405	55126405	8553170	3	111,72,325,	0,3420,6020,
#Partially deleted in new
chr12	55129680	55130802	chr12:55129680-55130802	1	+	55129768	55130776	789624	1	1122,	0,
#Partially deleted in new
chr12	55129680	55130802	chr12:55129680-55130802	1	+	55129834	55130776	789624	1	1122,	0,
#Partially deleted in new
chr12	55158846	55159723	chr12:55158846-55159723	7	+	55158846	55158846	16724991	1	877,	0,
#Deleted in new
chr12	55193881	55194786	chr12:55193881-55194786	7	-	55193881	55193881	16724991	1	905,	0,
#Deleted in new
chr12	55221024	55221975	chr12:55221024-55221975	3	+	55221024	55221975	789624	1	951,	0,
#Partially deleted in new
chr12	55247197	55248302	chr12:55247197-55248302	3	+	55247287	55248226	789624	1	1105,	0,
#Partially deleted in new
chr12	55262538	55263431	chr12:55262538-55263431	7	+	55262538	55262538	16724991	1	893,	0,
#Partially deleted in new
chr12	55283749	55284641	chr12:55283749-55284641	7	+	55283749	55283749	16724991	1	892,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	55293987	55296569	chr12:55293987-55296569	3	-	55294287	55295232	789624	2	1270,251,	0,2331,
#Deleted in new
chr12	55311834	55312757	chr12:55311834-55312757	7	+	55311834	55311834	16724991	1	923,	0,
#Partially deleted in new
chr12	55314342	55322364	chr12:55314342-55322364	3	+	55320599	55321538	789624	2	257,1798,	0,6224,
#Deleted in new
chr12	55320560	55321624	chr12:55320560-55321624	1	+	55320599	55321538	789624	1	1064,	0,
#Deleted in new
chr12	55330042	55332687	chr12:55330042-55332687	3	+	55331700	55332636	789624	2	310,1031,	0,1614,
#Deleted in new
chr12	55330745	55332687	chr12:55330745-55332687	1	+	55331700	55332636	789624	2	62,1031,	0,911,
#Deleted in new
chr12	55331700	55332636	chr12:55331700-55332636	1	+	55331700	55332636	789624	1	936,	0,
#Deleted in new
chr12	55342840	55343774	chr12:55342840-55343774	7	+	55342840	55342840	16724991	1	934,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	55362974	55369279	chr12:55362974-55369279	3	+	55365110	55366049	789624	3	75,90,4404,	0,818,1901,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	55362974	55369279	chr12:55362974-55369279	0	+	55362974	55362974	8553170	4	75,90,101,2144,	0,818,2101,4161,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	55363798	55366513	chr12:55363798-55366513	0	+	55363798	55363798	8553170	3	84,101,1255,	0,1277,1460,
#Deleted in new
chr12	55365110	55366049	chr12:55365110-55366049	1	+	55365110	55366049	789624	1	939,	0,
#Deleted in new
chr12	55376741	55378797	chr12:55376741-55378797	7	-	55376741	55376741	16724991	2	1024,83,	0,1973,
#Deleted in new
chr12	55376823	55377736	chr12:55376823-55377736	5	-	55376823	55376823	16724991	1	913,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	55385836	55392964	chr12:55385836-55392964	7	+	55385836	55385836	16724991	2	82,4545,	0,2583,
#Partially deleted in new
chr12	55386594	55389374	chr12:55386594-55389374	4	+	55386594	55386594	16724991	2	86,955,	0,1825,
#Deleted in new
chr12	55388444	55389374	chr12:55388444-55389374	5	+	55388444	55388444	16724991	1	930,	0,
#Deleted in new
chr12	55396339	55396697	chr12:55396339-55396697	7	+	55396339	55396339	16724991	1	358,	0,
#Deleted in new
chr12	55400429	55401505	chr12:55400429-55401505	3	+	55400528	55401467	789624	1	1076,	0,
#Deleted in new
chr12	55411726	55414787	chr12:55411726-55414787	7	-	55411726	55411726	16724991	1	3061,	0,
#Deleted in new
chr12	55426253	55427192	chr12:55426253-55427192	3	+	55426253	55427192	789624	1	939,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	55434733	55479472	chr12:55434733-55479472	0	-	55434733	55434733	8553170	3	398,53,84,	0,41815,44655,
#Partially deleted in new
chr12	55434754	55585471	chr12:55434754-55585471	3	-	55434754	55434754	8553170	4	377,53,68,57,	0,41794,58336,150660,
#Partially deleted in new
chr12	55434756	55493179	chr12:55434756-55493179	0	-	55434756	55434756	8553170	3	375,53,89,	0,41792,58334,
#Partially deleted in new
chr12	55434759	55585471	chr12:55434759-55585471	0	-	55434759	55434759	8553170	3	372,68,57,	0,58331,150655,
#Partially deleted in new
chr12	55444068	55453347	chr12:55444068-55453347	3	+	55452213	55453152	789624	2	77,1605,	0,7674,
#Partially deleted in new
chr12	55444075	55453347	chr12:55444075-55453347	1	+	55452213	55453152	789624	2	84,2021,	0,7251,
#Deleted in new
chr12	55452213	55453152	chr12:55452213-55453152	1	+	55452213	55453152	789624	1	939,	0,
#Deleted in new
chr12	55469199	55470138	chr12:55469199-55470138	3	-	55469199	55470138	789624	1	939,	0,
#Deleted in new
chr12	55492377	55493316	chr12:55492377-55493316	3	+	55492377	55493316	789624	1	939,	0,
#Deleted in new
chr12	55522592	55523417	chr12:55522592-55523417	7	+	55522592	55522592	16724991	1	825,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	55549601	55555832	chr12:55549601-55555832	1	+	55551226	55552156	789624	2	517,4624,	0,1607,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	55549601	55555832	chr12:55549601-55555832	3	+	55551226	55552156	789624	2	365,4624,	0,1607,
#Deleted in new
chr12	55551198	55552244	chr12:55551198-55552244	1	+	55551226	55552156	789624	1	1046,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	55572467	55575612	chr12:55572467-55575612	3	+	55574414	55575344	789624	2	155,1393,	0,1752,
#Deleted in new
chr12	55574414	55575344	chr12:55574414-55575344	1	+	55574414	55575344	789624	1	930,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	55608042	55615878	chr12:55608042-55615878	7	+	55608042	55608042	16724991	2	93,4291,	0,3545,
#Deleted in new
chr12	55611622	55612554	chr12:55611622-55612554	5	+	55611622	55611622	16724991	1	932,	0,
#Deleted in new
chr12	55636859	55637854	chr12:55636859-55637854	3	+	55636891	55637833	789624	1	995,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	55638911	55659795	chr12:55638911-55659795	3	-	55638911	55638911	8553170	2	405,83,	0,20801,
#Deleted in new
chr12	55646194	55646663	chr12:55646194-55646663	7	-	55646194	55646194	16724991	1	469,	0,
#Deleted in new
chr12	55654557	55655168	chr12:55654557-55655168	7	-	55654557	55654557	16724991	1	611,	0,
#Deleted in new
chr12	55662336	55662501	chr12:55662336-55662501	7	-	55662336	55662336	16724991	1	165,	0,
#Partially deleted in new
chr12	55681545	55684611	chr12:55681545-55684611	3	+	55681754	55684049	789624	2	707,799,	0,2267,
#Partially deleted in new
chr12	55681677	55684608	chr12:55681677-55684608	1	+	55681754	55684148	789624	3	575,234,559,	0,2135,2372,
#Partially deleted in new
chr12	55684567	55707898	chr12:55684567-55707898	3	-	55685057	55707682	789624	25	721,126,99,114,132,177,103,75,80,81,193,116,150,170,62,96,128,89,194,208,120,256,80,128,422,	0,3403,3634,4276,8276,8573,9453,9688,9875,10047,10210,10954,11715,12331,12648,12883,13127,13370,13815,14142,15302,16331,18304,18483,22909,
#Partially deleted in new
chr12	55684567	55707701	chr12:55684567-55707701	1	-	55685057	55707682	789624	25	721,126,99,114,132,177,103,75,80,81,193,116,150,170,62,96,128,89,194,208,132,256,80,128,225,	0,3403,3634,4276,8276,8573,9453,9688,9875,10047,10210,10954,11715,12331,12648,12883,13127,13370,13815,14142,15694,16331,18304,18483,22909,
#Partially deleted in new
chr12	55684571	55707884	chr12:55684571-55707884	1	-	55685057	55707682	789624	25	717,126,99,114,132,177,103,75,80,81,193,116,150,152,62,96,128,89,194,208,120,256,80,128,408,	0,3399,3630,4272,8272,8569,9449,9684,9871,10043,10206,10950,11711,12327,12644,12879,13123,13366,13811,14138,15298,16327,18300,18479,22905,
#Partially deleted in new
chr12	55684571	55712411	chr12:55684571-55712411	1	-	55685057	55712269	789624	25	717,126,99,114,132,177,103,75,80,81,193,116,150,170,62,96,128,89,194,208,132,256,38,72,155,	0,3399,3630,4272,8272,8569,9449,9684,9871,10043,10206,10950,11711,12327,12644,12879,13123,13366,13811,14138,15690,16327,16807,27491,27685,
#Partially deleted in new
chr12	55684571	55696427	chr12:55684571-55696427	0	-	55694628	55696427	789624	12	717,126,99,114,132,177,103,75,80,81,116,145,	0,3399,3630,4272,8272,8569,9449,9684,9871,10043,10950,11711,
#Partially deleted in new
chr12	55684702	55707711	chr12:55684702-55707711	1	-	55685057	55707682	789624	26	586,126,99,114,132,177,103,75,80,81,193,116,150,170,62,96,128,89,194,208,120,132,256,80,128,235,	0,3268,3499,4141,8141,8438,9318,9553,9740,9912,10075,10819,11580,12196,12513,12748,12992,13235,13680,14007,15167,15559,16196,18169,18348,22774,
#Partially deleted in new
chr12	55684857	55688891	chr12:55684857-55688891	0	-	55685227	55688891	789624	5	431,113,126,99,48,	0,1344,3113,3344,3986,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	55694649	55696416	chr12:55694649-55696416	0	-	55694649	55694649	8553170	3	46,860,134,	0,128,1633,
#Deleted in new
chr12	55697751	55698162	chr12:55697751-55698162	0	-	55697751	55697751	8553170	2	71,225,	0,186,
#Partially deleted in new
chr12	55697758	55716043	chr12:55697758-55716043	0	-	55698001	55712126	789624	5	64,89,208,72,125,	0,179,951,14304,18160,
#Deleted in new
chr12	55698522	55700314	chr12:55698522-55700314	0	-	55698522	55698522	8553170	3	54,208,445,	0,187,1347,
#Partially deleted in new
chr12	55698773	55712118	chr12:55698773-55712118	0	-	55698773	55701094	789624	4	144,120,256,56,	0,1096,2125,13289,
#Partially deleted in new
chr12	55698857	55712204	chr12:55698857-55712204	0	-	55698857	55698857	8553170	5	60,61,120,589,142,	0,653,1012,1708,13205,
#Partially deleted in new
chr12	55699977	55712281	chr12:55699977-55712281	0	-	55703095	55712269	789624	6	12,256,80,128,72,25,	0,921,2894,3073,12085,12279,
#Partially deleted in new
chr12	55700671	55712085	chr12:55700671-55712085	0	-	55703095	55712085	789624	5	300,21,80,128,23,	0,462,2200,2379,11391,
#Partially deleted in new
chr12	55700775	55716037	chr12:55700775-55716037	0	-	55700775	55700775	8553170	3	379,72,119,	0,11287,15143,
#Partially deleted in new
chr12	55700782	55712305	chr12:55700782-55712305	0	-	55700782	55700782	8553170	3	372,72,49,	0,11280,11474,
#Partially deleted in new
chr12	55700988	55716030	chr12:55700988-55716030	0	-	55703095	55712126	789624	5	166,80,128,72,112,	0,1883,2062,11074,14930,
#Partially deleted in new
chr12	55700996	55712257	chr12:55700996-55712257	0	-	55703095	55712126	789624	4	158,80,128,195,	0,1875,2054,11066,
#Partially deleted in new
chr12	55702827	55707713	chr12:55702827-55707713	0	-	55702827	55702827	8553170	2	351,237,	0,4649,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	55716035	55724703	chr12:55716035-55724703	3	+	55716051	55721706	789624	4	161,73,133,3015,	0,897,3055,5653,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	55716035	55722418	chr12:55716035-55722418	0	+	55716051	55719110	789624	3	161,133,730,	0,3055,5653,
#Partially deleted in new
chr12	55716036	55719703	chr12:55716036-55719703	3	+	55716051	55719609	789624	4	160,73,133,205,	0,896,3054,3462,
#Partially deleted in new
chr12	55716037	55720087	chr12:55716037-55720087	1	+	55716051	55719301	789624	3	159,73,997,	0,895,3053,
#Partially deleted in new
chr12	55716077	55724691	chr12:55716077-55724691	0	+	55716077	55721706	789624	5	119,73,133,266,154,	0,855,3013,5611,8460,
#Partially deleted in new
chr12	55716080	55719670	chr12:55716080-55719670	0	+	55716080	55719110	789624	3	116,133,172,	0,3010,3418,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	55716291	55719703	chr12:55716291-55719703	1	+	55719106	55719609	789624	4	426,73,133,205,	0,641,2799,3207,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	55716512	55719343	chr12:55716512-55719343	1	+	55719106	55719301	789624	3	205,73,253,	0,420,2578,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	55716530	55719703	chr12:55716530-55719703	1	+	55719106	55719609	789624	3	187,133,205,	0,2560,2968,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	55716589	55721794	chr12:55716589-55721794	1	+	55719106	55721706	789624	3	128,133,106,	0,2501,5099,
#Partially deleted in new
chr12	55720366	55724606	chr12:55720366-55724606	1	+	55721475	55724545	789624	5	151,195,259,164,285,	0,933,1322,3519,3955,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	55720392	55722339	chr12:55720392-55722339	0	+	55720392	55720392	8553170	3	125,195,651,	0,907,1296,
#Partially deleted in new
chr12	55720392	55721836	chr12:55720392-55721836	0	+	55721475	55721836	789624	3	125,254,148,	0,848,1296,
#Partially deleted in new
chr12	55720392	55721993	chr12:55720392-55721993	0	+	55720392	55720392	8553170	3	125,195,305,	0,907,1296,
#Partially deleted in new
chr12	55720397	55724705	chr12:55720397-55724705	3	+	55721184	55724545	789624	5	120,342,259,164,384,	0,755,1291,3488,3924,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	55720410	55722658	chr12:55720410-55722658	0	+	55720410	55720410	8553170	3	107,342,970,	0,742,1278,
#Partially deleted in new
chr12	55720412	55724705	chr12:55720412-55724705	1	+	55721184	55724545	789624	5	105,347,259,164,384,	0,735,1276,3473,3909,
#Partially deleted in new
chr12	55720488	55721828	chr12:55720488-55721828	0	+	55720488	55720488	8553170	2	29,529,	0,811,
#Partially deleted in new
chr12	55721194	55724438	chr12:55721194-55724438	0	+	55721194	55723896	789624	3	300,164,117,	0,2691,3127,
#Deleted in new
chr12	55723366	55724614	chr12:55723366-55724614	0	+	55723366	55723366	8553170	2	683,293,	0,955,
#Partially deleted in new
chr12	55725322	55727108	chr12:55725322-55727108	1	-	55725560	55726940	789624	6	304,84,141,96,75,27,	0,490,798,1377,1567,1759,
#Partially deleted in new
chr12	55725442	55728650	chr12:55725442-55728650	1	-	55725560	55728341	789624	8	184,84,141,96,75,189,77,135,	0,370,678,1257,1447,1708,2833,3073,
#Deleted in new
chr12	55725447	55726356	chr12:55725447-55726356	0	-	55725447	55725447	8553170	3	179,84,236,	0,365,673,
#Partially deleted in new
chr12	55725447	55727128	chr12:55725447-55727128	1	-	55725560	55726940	789624	6	179,84,141,96,74,47,	0,365,673,1252,1442,1634,
#Partially deleted in new
chr12	55725469	55727900	chr12:55725469-55727900	1	-	55725560	55727159	789624	7	157,84,141,96,75,189,37,	0,343,651,1230,1420,1681,2394,
#Partially deleted in new
chr12	55725469	55727059	chr12:55725469-55727059	1	-	55725560	55726940	789624	5	157,84,141,96,170,	0,343,651,1230,1420,
#Partially deleted in new
chr12	55725469	55728482	chr12:55725469-55728482	1	-	55725560	55728341	789624	7	157,84,141,96,75,189,207,	0,343,651,1230,1420,1681,2806,
#Partially deleted in new
chr12	55725481	55729707	chr12:55725481-55729707	3	-	55725560	55728341	789624	8	145,84,141,96,75,189,77,426,	0,331,639,1218,1408,1669,2794,3800,
#Partially deleted in new
chr12	55725486	55729220	chr12:55725486-55729220	1	-	55725560	55728341	789624	8	140,84,141,96,75,189,77,268,	0,326,634,1213,1403,1664,2789,3466,
#Partially deleted in new
chr12	55725506	55729000	chr12:55725506-55729000	0	-	55726791	55728341	789624	8	120,84,141,96,74,189,77,48,	0,306,614,1193,1383,1644,2769,3446,
#Partially deleted in new
chr12	55725534	55728349	chr12:55725534-55728349	1	-	55725560	55728341	789624	7	92,84,141,96,75,120,74,	0,278,586,1165,1355,1616,2741,
#Partially deleted in new
chr12	55725545	55727815	chr12:55725545-55727815	1	-	55725560	55727159	789624	7	81,84,141,96,75,189,204,	0,267,575,1154,1344,1605,2066,
#Deleted in new
chr12	55725552	55725968	chr12:55725552-55725968	0	-	55725552	55725552	8553170	2	74,156,	0,260,
#Partially deleted in new
chr12	55725811	55728977	chr12:55725811-55728977	0	-	55725811	55728341	789624	7	85,141,96,75,189,77,182,	0,309,888,1078,1339,2464,2984,
#Partially deleted in new
chr12	55725818	55728647	chr12:55725818-55728647	0	-	55725818	55728341	789624	7	78,141,96,75,189,77,132,	0,302,881,1071,1332,2457,2697,
#Deleted in new
chr12	55726726	55729660	chr12:55726726-55729660	0	-	55726726	55728341	789624	6	69,75,189,77,112,85,	0,163,424,1549,2555,2849,
#Deleted in new
chr12	55729103	55730852	chr12:55729103-55730852	3	+	55729103	55729103	8553170	2	252,1191,	0,558,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	55731263	55731531	chr12:55731263-55731531	3	-	55731263	55731263	8553170	1	268,	0,
#Deleted in new
chr12	55732365	55732648	chr12:55732365-55732648	7	-	55732365	55732365	16724991	1	283,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	55743279	55757278	chr12:55743279-55757278	3	+	55743316	55749882	0	3	482,398,7777,	0,5306,6222,
#Partially deleted in new
chr12	55743398	55757127	chr12:55743398-55757127	0	+	55743398	55749882	789624	4	363,398,382,115,	0,5187,6103,13614,
#Partially deleted in new
chr12	55752462	55817724	chr12:55752462-55817724	0	-	55757511	55817701	0	12	378,171,90,69,26,29,74,52,68,47,100,59,	0,4920,8088,36612,38104,41896,42344,43562,48099,48391,51166,65203,
#Partially deleted in new
chr12	55752579	55817722	chr12:55752579-55817722	0	-	55800606	55817701	789624	11	261,171,90,69,26,29,74,52,68,100,57,	0,4803,7971,36495,37987,41779,42227,43445,47982,51049,65086,
#Partially deleted in new
chr12	55757270	55760785	chr12:55757270-55760785	0	-	55757270	55757270	8553170	2	283,235,	0,3280,
#Partially deleted in new
chr12	55757273	55817756	chr12:55757273-55817756	3	-	55757511	55817701	0	11	280,90,69,26,29,74,52,68,47,100,91,	0,3277,31801,33293,37085,37533,38751,43288,43580,46355,60392,
#Partially deleted in new
chr12	55757274	55827546	chr12:55757274-55827546	3	-	55757511	55827546	789624	16	279,90,69,26,29,74,52,68,47,100,187,103,161,120,107,295,	0,3276,31800,33292,37084,37532,38750,43287,43579,46354,64726,65098,65297,65795,66127,69977,
#Partially deleted in new
chr12	55760423	55817709	chr12:55760423-55817709	1	-	55760499	55817701	789624	10	217,69,26,29,74,52,68,47,100,44,	0,28651,30143,33935,34383,35601,40138,40430,43205,57242,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	55761549	55762628	chr12:55761549-55762628	3	-	55761549	55761549	8553170	2	478,51,	0,1028,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	55792541	55817720	chr12:55792541-55817720	0	-	55792541	55792541	8553170	7	1846,74,52,68,47,100,55,	0,2265,3483,8020,8312,11087,25124,
#Partially deleted in new
chr12	55803688	55822676	chr12:55803688-55822676	0	-	55820326	55822676	789624	5	40,211,187,103,105,	0,16550,18312,18684,18883,
#Partially deleted in new
chr12	55803688	55822689	chr12:55803688-55822689	0	-	55818041	55822689	789624	5	40,463,58,103,118,	0,13977,18441,18684,18883,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	55803688	55822659	chr12:55803688-55822659	0	-	55818041	55822659	789624	6	40,53,463,58,103,88,	0,12198,13977,18441,18684,18883,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	55803688	55822719	chr12:55803688-55822719	0	-	55803688	55803688	8553170	5	40,53,187,103,148,	0,12198,18312,18684,18883,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	55817918	55821879	chr12:55817918-55821879	3	+	55818999	55820395	789624	4	194,175,152,1620,	0,1080,1423,2341,
#Partially deleted in new
chr12	55818040	55820712	chr12:55818040-55820712	1	+	55819101	55820395	789624	4	72,83,152,453,	0,1050,1301,2219,
#Partially deleted in new
chr12	55818043	55820476	chr12:55818043-55820476	1	+	55819431	55820395	789624	3	69,152,217,	0,1298,2216,
#Partially deleted in new
chr12	55818329	55820513	chr12:55818329-55820513	1	+	55818999	55820395	789624	4	90,175,152,254,	0,669,1012,1930,
#Deleted in new
chr12	55818355	55819420	chr12:55818355-55819420	0	+	55818355	55818355	8553170	2	818,79,	0,986,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	55820959	55829636	chr12:55820959-55829636	1	-	55821976	55828658	789624	7	1228,103,161,120,107,1463,148,	0,1413,1612,2110,2442,6292,8529,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	55820959	55830781	chr12:55820959-55830781	3	-	55821976	55828658	789624	8	1228,103,161,120,107,1463,148,86,	0,1413,1612,2110,2442,6292,8529,9736,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	55821750	55830558	chr12:55821750-55830558	1	-	55821976	55828658	789624	7	437,103,161,120,107,1463,383,	0,622,821,1319,1651,5501,8425,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	55821828	55823191	chr12:55821828-55823191	1	-	55821996	55823191	789624	5	282,76,103,161,122,	0,283,544,743,1241,
#Partially deleted in new
chr12	55828205	55830824	chr12:55828205-55830824	0	-	55828205	55828658	789624	2	509,129,	0,2490,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	55828421	55829603	chr12:55828421-55829603	0	-	55828421	55828658	789624	2	293,463,	0,719,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	55829607	55836244	chr12:55829607-55836244	7	+	55829607	55829607	16724991	5	218,1124,93,95,1394,	0,352,1649,3839,5243,
#Partially deleted in new
chr12	55830827	55835234	chr12:55830827-55835234	4	+	55830827	55830827	16724991	5	256,93,56,95,384,	0,429,2131,2619,4023,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	55830832	55836246	chr12:55830832-55836246	5	+	55830832	55830832	16724991	3	251,583,1396,	0,2126,4018,
#Partially deleted in new
chr12	55830838	55835047	chr12:55830838-55835047	4	+	55830838	55830838	16724991	4	245,56,95,197,	0,2120,2608,4012,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	55830840	55836244	chr12:55830840-55836244	4	+	55830840	55830840	16724991	4	243,93,583,1394,	0,416,2118,4010,
#Partially deleted in new
chr12	55830840	55831573	chr12:55830840-55831573	4	+	55830840	55830840	16724991	2	243,317,	0,416,
#Partially deleted in new
chr12	55830840	55833021	chr12:55830840-55833021	4	+	55830840	55830840	16724991	2	509,63,	0,2118,
#Partially deleted in new
chr12	55830840	55833521	chr12:55830840-55833521	4	+	55830840	55830840	16724991	4	243,93,167,75,	0,416,2118,2606,
#Partially deleted in new
chr12	55830840	55835007	chr12:55830840-55835007	4	+	55830840	55830840	16724991	4	243,80,95,157,	0,2118,2606,4010,
#Partially deleted in new
chr12	55830842	55833588	chr12:55830842-55833588	4	+	55830842	55830842	16724991	4	241,93,56,142,	0,414,2116,2604,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	55830853	55836246	chr12:55830853-55836246	5	+	55830853	55830853	16724991	5	230,93,144,95,1396,	0,403,2017,2593,3997,
#Partially deleted in new
chr12	55832158	55834988	chr12:55832158-55834988	5	+	55832158	55832158	16724991	4	175,583,158,138,	0,800,2410,2692,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	55832846	55836246	chr12:55832846-55836246	5	+	55832846	55832846	16724991	3	695,765,121,	0,2004,3279,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	55835432	55842949	chr12:55835432-55842949	0	-	55839668	55842830	789624	4	3302,246,86,206,	0,4063,6920,7311,
#Partially deleted in new
chr12	55836425	55842922	chr12:55836425-55842922	3	-	55837035	55842830	789624	9	949,128,165,129,246,216,131,86,179,	0,1129,1417,2180,3070,4241,4680,5927,6318,
#Partially deleted in new
chr12	55836425	55840034	chr12:55836425-55840034	0	-	55836425	55836425	8553170	5	949,128,165,235,539,	0,1129,1417,2074,3070,
#Partially deleted in new
chr12	55836425	55842966	chr12:55836425-55842966	0	-	55841188	55842830	789624	9	949,128,165,235,246,216,102,86,223,	0,1129,1417,2074,3070,4241,4680,5927,6318,
#Partially deleted in new
chr12	55836800	55842950	chr12:55836800-55842950	1	-	55837035	55842830	789624	9	574,128,165,129,246,147,131,86,207,	0,754,1042,1805,2695,3866,4305,5552,5943,
#Partially deleted in new
chr12	55836969	55842936	chr12:55836969-55842936	1	-	55837844	55842830	789624	7	405,165,235,216,131,86,193,	0,873,1530,3697,4136,5383,5774,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	55838287	55842940	chr12:55838287-55842940	0	-	55840728	55842830	789624	4	447,216,86,197,	0,2379,4065,4456,
#Partially deleted in new
chr12	55841126	55842940	chr12:55841126-55842940	0	-	55841126	55841126	8553170	3	285,86,197,	0,1226,1617,
#Partially deleted in new
chr12	55841182	55842960	chr12:55841182-55842960	0	-	55841182	55841182	8553170	3	54,86,34,	0,1170,1744,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	55870047	55872602	chr12:55870047-55872602	7	-	55870047	55870047	16724991	1	2555,	0,
#Partially deleted in new
chr12	55900299	55900618	chr12:55900299-55900618	7	+	55900299	55900299	16724991	1	319,	0,
#Partially deleted in new
chr12	55901412	55927913	chr12:55901412-55927913	3	-	55901871	55927761	789624	3	943,94,189,	0,1974,26312,
#Partially deleted in new
chr12	55901413	55927112	chr12:55901413-55927112	1	-	55901871	55927109	789624	3	942,94,37,	0,1973,25662,
#Partially deleted in new
chr12	55901686	55927111	chr12:55901686-55927111	0	-	55901686	55901686	8553170	4	669,94,91,36,	0,1700,12589,25389,
#Partially deleted in new
chr12	55901970	55927613	chr12:55901970-55927613	1	-	55903420	55927392	789624	3	385,94,296,	0,1416,25347,
#Partially deleted in new
chr12	55902040	55932618	chr12:55902040-55932618	1	-	55903420	55932606	789624	3	315,94,90,	0,1346,30488,
#Partially deleted in new
chr12	55913745	55927756	chr12:55913745-55927756	0	-	55914285	55927756	789624	2	621,32,	0,13979,
#Partially deleted in new
chr12	55913825	55927875	chr12:55913825-55927875	1	-	55914285	55927228	789624	3	541,192,151,	0,13250,13899,
#Partially deleted in new
chr12	55927318	55937443	chr12:55927318-55937443	0	+	55936503	55937443	789624	4	301,145,74,36,	0,9104,9698,10089,
#Partially deleted in new
chr12	55928254	55938592	chr12:55928254-55938592	0	+	55928254	55928254	8553170	6	80,145,74,136,75,82,	0,8168,8762,9153,9723,10256,
#Deleted in new
chr12	55929169	55929729	chr12:55929169-55929729	3	+	55929169	55929169	8553170	1	560,	0,
#Partially deleted in new
chr12	55930971	55954015	chr12:55930971-55954015	3	+	55936503	55953768	0	24	373,145,74,136,75,50,75,120,115,89,120,99,84,74,75,86,90,161,65,91,199,121,61,331,	0,5451,6045,6436,7006,7539,7943,8214,8443,9110,9342,9652,9925,10280,10538,11026,11202,20651,21063,21369,21762,22068,22378,22713,
#Deleted in new
chr12	55931088	55937084	chr12:55931088-55937084	0	+	55936503	55937084	789624	4	256,100,145,68,	0,4216,5334,5928,
#Deleted in new
chr12	55931161	55937032	chr12:55931161-55937032	0	+	55936503	55937032	789624	4	183,145,204,16,	0,5261,5491,5855,
#Partially deleted in new
chr12	55931161	55952869	chr12:55931161-55952869	0	+	55936503	55952869	789624	20	183,145,14,28,50,75,120,115,89,120,99,84,74,75,86,90,161,65,91,136,	0,5261,5855,6863,7349,7753,8024,8253,8920,9152,9462,9735,10090,10348,10836,11012,20461,20873,21179,21572,
#Deleted in new
chr12	55931171	55936862	chr12:55931171-55936862	0	+	55931171	55931171	8553170	2	173,440,	0,5251,
#Partially deleted in new
chr12	55931191	55938068	chr12:55931191-55938068	0	+	55931191	55931191	8553170	5	153,145,74,136,91,	0,5231,5825,6216,6786,
#Partially deleted in new
chr12	55931214	55951708	chr12:55931214-55951708	0	+	55936503	55938645	0	18	130,145,74,136,75,61,75,120,115,89,120,99,84,74,75,86,90,86,	0,5208,5802,6193,6763,7423,7700,7971,8200,8867,9099,9409,9682,10037,10295,10783,10959,20408,
#Partially deleted in new
chr12	55931298	55940898	chr12:55931298-55940898	0	+	55931298	55931298	8553170	12	46,145,74,136,75,50,75,120,115,89,120,275,	0,5124,5718,6109,6679,7212,7616,7887,8116,8783,9015,9325,
#Partially deleted in new
chr12	55931452	55938942	chr12:55931452-55938942	0	+	55936503	55938645	0	7	44,145,74,136,75,61,28,	0,4970,5564,5955,6525,7185,7462,
#Partially deleted in new
chr12	55931452	55938957	chr12:55931452-55938957	0	+	55936503	55938957	789624	7	44,145,74,136,75,50,43,	0,4970,5564,5955,6525,7058,7462,
#Partially deleted in new
chr12	55931471	55938880	chr12:55931471-55938880	0	+	55931471	55931471	8553170	6	25,145,74,136,75,370,	0,4951,5545,5936,6506,7039,
#Deleted in new
chr12	55931788	55937084	chr12:55931788-55937084	0	+	55936503	55937084	789624	3	335,145,68,	0,4634,5228,
#Partially deleted in new
chr12	55932027	55954021	chr12:55932027-55954021	1	+	55936503	55953768	0	24	228,145,74,136,75,50,75,120,115,89,120,99,84,74,75,86,90,161,65,91,199,121,61,337,	0,4395,4989,5380,5950,6483,6887,7158,7387,8054,8286,8596,8869,9224,9482,9970,10146,19595,20007,20313,20706,21012,21322,21657,
#Partially deleted in new
chr12	55932050	55938558	chr12:55932050-55938558	0	+	55932050	55932050	8553170	6	73,145,74,150,75,48,	0,4372,4966,5357,5927,6460,
#Partially deleted in new
chr12	55932050	55938728	chr12:55932050-55938728	0	+	55932050	55932050	8553170	6	73,145,74,136,75,91,	0,4372,4966,5357,5927,6587,
#Partially deleted in new
chr12	55932050	55938090	chr12:55932050-55938090	0	+	55932050	55932050	8553170	5	73,145,74,136,113,	0,4372,4966,5357,5927,
#Partially deleted in new
chr12	55932051	55940111	chr12:55932051-55940111	0	+	55932051	55932051	8553170	9	72,145,74,136,75,50,75,120,697,	0,4371,4965,5356,5926,6459,6863,7134,7363,
#Partially deleted in new
chr12	55932057	55954027	chr12:55932057-55954027	0	+	55936503	55940348	0	23	123,145,74,136,75,50,75,120,115,120,99,84,74,75,86,90,161,65,91,199,121,61,343,	0,4365,4959,5350,5920,6453,6857,7128,7357,8256,8566,8839,9194,9452,9940,10116,19565,19977,20283,20676,20982,21292,21627,
#Partially deleted in new
chr12	55932057	55954027	chr12:55932057-55954027	1	+	55936503	55953768	0	24	123,145,74,136,75,50,75,120,115,89,120,99,84,74,75,86,90,161,65,91,199,121,61,343,	0,4365,4959,5350,5920,6453,6857,7128,7357,8024,8256,8566,8839,9194,9452,9940,10116,19565,19977,20283,20676,20982,21292,21627,
#Partially deleted in new
chr12	55932062	55938025	chr12:55932062-55938025	0	+	55936503	55938025	789624	6	61,100,145,74,136,48,	0,3242,4360,4954,5345,5915,
#Deleted in new
chr12	55932063	55937084	chr12:55932063-55937084	0	+	55936503	55937084	789624	4	192,100,145,68,	0,3241,4359,4953,
#Partially deleted in new
chr12	55932094	55938052	chr12:55932094-55938052	0	+	55936503	55938052	789624	5	161,145,74,136,75,	0,4328,4922,5313,5883,
#Partially deleted in new
chr12	55932107	55938561	chr12:55932107-55938561	0	+	55936503	55938561	789624	6	16,145,74,136,75,51,	0,4315,4909,5300,5870,6403,
#Deleted in new
chr12	55932134	55933608	chr12:55932134-55933608	0	+	55932134	55932134	8553170	3	121,349,104,	0,426,1370,
#Deleted in new
chr12	55932162	55935402	chr12:55932162-55935402	0	+	55932162	55932162	8553170	3	93,349,98,	0,398,3142,
#Partially deleted in new
chr12	55935335	55954021	chr12:55935335-55954021	0	+	55935335	55935335	8553170	22	1755,136,75,50,75,120,115,87,120,99,84,74,75,86,90,161,65,91,199,121,61,337,	0,2072,2642,3175,3579,3850,4079,4746,4978,5288,5561,5916,6174,6662,6838,16287,16699,17005,17398,17704,18014,18349,
#Partially deleted in new
chr12	55935833	55938560	chr12:55935833-55938560	0	+	55936503	55938560	789624	6	125,145,74,136,75,50,	0,589,1183,1574,2144,2677,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	55936146	55954021	chr12:55936146-55954021	0	+	55936146	55936146	8553170	16	944,136,1328,115,89,120,99,429,75,86,90,124,809,199,121,672,	0,1261,1831,3268,3935,4167,4477,4750,5363,5851,6027,7150,15476,16587,16893,17203,
#Partially deleted in new
chr12	55936447	55939290	chr12:55936447-55939290	0	+	55936503	55938916	789624	6	120,74,136,75,75,105,	0,569,960,1530,2467,2738,
#Partially deleted in new
chr12	55937524	55939615	chr12:55937524-55939615	0	+	55937524	55937524	8553170	6	19,75,50,75,120,201,	0,453,986,1390,1661,1890,
#Partially deleted in new
chr12	55937977	55953795	chr12:55937977-55953795	0	+	55937977	55937977	8553170	20	75,50,75,120,115,89,120,99,84,74,75,86,90,161,65,91,199,121,61,111,	0,533,937,1208,1437,2104,2336,2646,2919,3274,3532,4020,4196,13645,14057,14363,14756,15062,15372,15707,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	55938258	55954014	chr12:55938258-55954014	0	+	55938258	55938258	8553170	14	731,120,1019,99,84,74,75,86,90,124,477,592,121,665,	0,927,1156,2365,2638,2993,3251,3739,3915,5038,13364,14082,14781,15091,
#Deleted in new
chr12	55938552	55939542	chr12:55938552-55939542	0	+	55938552	55938552	8553170	3	8,391,128,	0,362,862,
#Deleted in new
chr12	55938651	55939895	chr12:55938651-55939895	0	+	55938651	55938651	8553170	4	47,51,120,481,	0,287,534,763,
#Deleted in new
chr12	55938689	55939615	chr12:55938689-55939615	0	+	55938689	55938689	8553170	3	300,120,201,	0,496,725,
#Deleted in new
chr12	55938747	55940170	chr12:55938747-55940170	0	+	55938747	55938747	8553170	4	242,120,115,89,	0,438,667,1334,
#Deleted in new
chr12	55938802	55940582	chr12:55938802-55940582	0	+	55938802	55938802	8553170	5	187,120,115,89,269,	0,383,612,1279,1511,
#Deleted in new
chr12	55938937	55942648	chr12:55938937-55942648	0	+	55938937	55938937	8553170	9	52,120,756,120,99,84,74,75,651,	0,248,477,1376,1686,1959,2314,2572,3060,
#Deleted in new
chr12	55939280	55941326	chr12:55939280-55941326	0	+	55939280	55939280	8553170	6	25,115,352,99,84,75,	0,134,801,1343,1616,1971,
#Deleted in new
chr12	55939474	55942037	chr12:55939474-55942037	0	+	55939474	55940401	789624	8	55,89,182,99,84,74,75,40,	0,607,777,1149,1422,1777,2035,2523,
#Deleted in new
chr12	55939486	55940994	chr12:55939486-55940994	0	+	55939486	55939486	8553170	3	43,641,98,	0,595,1410,
#Deleted in new
chr12	55939914	55940510	chr12:55939914-55940510	0	+	55939914	55939914	8553170	2	256,197,	0,399,
#Partially deleted in new
chr12	55940974	55952767	chr12:55940974-55952767	0	+	55940974	55952767	789624	8	6,74,86,90,161,65,91,34,	0,277,1023,1199,10648,11060,11366,11759,
#Partially deleted in new
chr12	55941284	55952410	chr12:55941284-55952410	0	+	55941284	55941284	8553170	6	41,75,266,161,65,70,	0,225,713,10338,10750,11056,
#Deleted in new
chr12	55952927	55953447	chr12:55952927-55953447	0	+	55952927	55952927	8553170	3	5,121,98,	0,112,422,
#Deleted in new
chr12	55953203	55954010	chr12:55953203-55954010	0	+	55953203	55953203	8553170	2	207,326,	0,481,
#Partially deleted in new
chr12	55954104	55966022	chr12:55954104-55966022	1	-	55954213	55966011	0	11	245,109,206,85,117,723,162,135,147,111,87,	0,1169,1359,1674,1998,2844,3818,4368,7212,7517,11831,
#Partially deleted in new
chr12	55954104	55966662	chr12:55954104-55966662	1	-	55954213	55966011	0	12	245,88,206,85,117,723,162,135,147,111,127,370,	0,1169,1359,1674,1998,2844,3818,4368,7212,7517,11831,12188,
#Partially deleted in new
chr12	55954105	55966736	chr12:55954105-55966736	3	-	55954213	55966011	0	12	244,88,206,85,117,723,162,135,147,111,127,59,	0,1168,1358,1673,1997,2843,3817,4367,7211,7516,11830,12572,
#Partially deleted in new
chr12	55954105	55966674	chr12:55954105-55966674	1	-	55954213	55966011	0	11	244,88,206,85,117,723,162,135,147,111,739,	0,1168,1358,1673,1997,2843,3817,4367,7211,7516,11830,
#Partially deleted in new
chr12	55954105	55966042	chr12:55954105-55966042	1	-	55954213	55966011	0	9	244,88,206,85,117,723,162,135,107,	0,1168,1358,1673,1997,2843,3817,4367,11830,
#Partially deleted in new
chr12	55954199	55966025	chr12:55954199-55966025	1	-	55954213	55966011	789624	7	150,88,206,85,135,147,90,	0,1074,1264,1579,4273,7117,11736,
#Partially deleted in new
chr12	55954275	55957342	chr12:55954275-55957342	0	-	55954275	55954275	8553170	4	74,109,85,235,	0,998,1188,2832,
#Deleted in new
chr12	55955325	55958603	chr12:55955325-55958603	0	-	55955325	55958603	789624	8	57,206,85,117,111,486,162,131,	0,138,453,777,1623,1860,2597,3147,
#Deleted in new
chr12	55955795	55956539	chr12:55955795-55956539	0	-	55955795	55955795	8553170	2	68,437,	0,307,
#Partially deleted in new
chr12	55956112	55966018	chr12:55956112-55966018	0	-	55956112	55966011	789624	7	107,111,201,135,147,111,83,	0,836,1073,2360,5204,5509,9823,
#Partially deleted in new
chr12	55957108	55966026	chr12:55957108-55966026	0	-	55957108	55966011	789624	5	563,135,147,111,91,	0,1364,4208,4513,8827,
#Partially deleted in new
chr12	55957258	55966026	chr12:55957258-55966026	0	-	55957258	55966011	789624	5	413,162,135,111,91,	0,664,1214,4363,8677,
#Deleted in new
chr12	55957284	55958677	chr12:55957284-55958677	0	-	55957284	55957284	8553170	3	387,162,205,	0,638,1188,
#Partially deleted in new
chr12	55957933	55966709	chr12:55957933-55966709	0	-	55957933	55957933	8553170	5	151,135,147,111,32,	0,539,3383,3688,8744,
#Partially deleted in new
chr12	55958171	55966042	chr12:55958171-55966042	0	-	55958171	55958171	8553170	4	436,147,111,107,	0,3145,3450,7764,
#Partially deleted in new
chr12	55958251	55966709	chr12:55958251-55966709	0	-	55958251	55958251	8553170	4	356,147,111,32,	0,3065,3370,8426,
#Partially deleted in new
chr12	55958488	55966675	chr12:55958488-55966675	0	-	55958488	55966011	789624	5	119,147,111,127,64,	0,2828,3133,7447,8123,
#Partially deleted in new
chr12	55958546	55973317	chr12:55958546-55973317	0	-	55958546	55971037	789624	6	61,147,111,157,23,74,	0,2770,3075,12406,13198,14697,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	55961199	55966021	chr12:55961199-55966021	0	-	55961199	55961199	8553170	3	264,111,86,	0,422,4736,
#Partially deleted in new
chr12	55966768	55972784	chr12:55966768-55972784	3	+	55967008	55971625	0	7	356,78,121,171,102,204,1264,	0,1088,1280,2009,2706,4275,4752,
#Partially deleted in new
chr12	55966780	55971099	chr12:55966780-55971099	0	+	55966780	55966780	8553170	6	85,98,78,121,171,56,	0,246,1076,1268,1997,4263,
#Partially deleted in new
chr12	55966799	55972385	chr12:55966799-55972385	0	+	55967008	55967128	789624	6	1135,121,171,102,204,865,	0,1249,1978,2675,4244,4721,
#Partially deleted in new
chr12	55966820	55972121	chr12:55966820-55972121	1	+	55967008	55971625	789624	8	304,78,121,171,102,144,204,601,	0,1036,1228,1957,2654,3777,4223,4700,
#Partially deleted in new
chr12	55966829	55971760	chr12:55966829-55971760	1	+	55967008	55971625	789624	5	295,121,171,204,240,	0,1219,1948,4214,4691,
#Partially deleted in new
chr12	55966830	55971912	chr12:55966830-55971912	1	+	55967008	55971625	0	6	294,78,121,171,204,392,	0,1026,1218,1947,4213,4690,
#Deleted in new
chr12	55966830	55968311	chr12:55966830-55968311	0	+	55967008	55967128	789624	2	1104,263,	0,1218,
#Partially deleted in new
chr12	55966833	55969883	chr12:55966833-55969883	0	+	55966833	55966833	8553170	4	1101,121,171,409,	0,1215,1944,2641,
#Deleted in new
chr12	55966837	55967474	chr12:55966837-55967474	3	-	55966837	55966837	8553170	2	325,240,	0,397,
#Partially deleted in new
chr12	55967279	55971099	chr12:55967279-55971099	0	+	55967279	55967279	8553170	6	137,78,121,171,102,56,	0,577,769,1498,2195,3764,
#Partially deleted in new
chr12	55967320	55971625	chr12:55967320-55971625	0	+	55967320	55967320	8553170	6	82,78,121,171,102,582,	0,536,728,1457,2154,3723,
#Partially deleted in new
chr12	55967461	55971087	chr12:55967461-55971087	0	+	55967461	55967461	8553170	5	473,121,171,102,44,	0,587,1316,2013,3582,
#Deleted in new
chr12	55971119	55971837	chr12:55971119-55971837	0	+	55971119	55971119	8553170	2	128,317,	0,401,
#Partially deleted in new
chr12	55973912	55994706	chr12:55973912-55994706	1	+	55986960	55992212	0	6	88,255,152,123,94,2610,	0,12956,16034,16769,17447,18184,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	55974010	55996683	chr12:55974010-55996683	3	+	55986960	55992212	0	6	129,255,152,123,94,4587,	0,12858,15936,16671,17349,18086,
#Partially deleted in new
chr12	55974073	55994706	chr12:55974073-55994706	0	+	55986960	55990740	789624	5	66,255,123,94,2610,	0,12795,16608,17286,18023,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	55974077	55990218	chr12:55974077-55990218	0	+	55974077	55974077	8553170	3	62,255,272,	0,12791,15869,
#Partially deleted in new
chr12	55974083	55990711	chr12:55974083-55990711	0	+	55986960	55990711	789624	5	56,103,255,152,30,	0,5288,12785,15863,16598,
#Partially deleted in new
chr12	55974096	55987092	chr12:55974096-55987092	0	+	55985710	55987092	789624	4	43,103,124,224,	0,5275,11503,12772,
#Partially deleted in new
chr12	55974100	55993086	chr12:55974100-55993086	1	+	55986960	55992212	0	5	39,255,152,94,990,	0,12768,15846,17259,17996,
#Partially deleted in new
chr12	55974100	55990084	chr12:55974100-55990084	0	+	55986960	55990084	789624	5	39,103,34,255,138,	0,5271,6788,12768,15846,
#Partially deleted in new
chr12	55980431	55981035	chr12:55980431-55981035	7	-	55980431	55980431	16724991	1	604,	0,
#Partially deleted in new
chr12	55986960	55992212	chr12:55986960-55992212	1	+	55986960	55990740	789624	4	163,123,94,116,	0,3721,4399,5136,
#Partially deleted in new
chr12	55989955	55991096	chr12:55989955-55991096	0	+	55989955	55989955	8553170	2	143,415,	0,726,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	55990720	55991940	chr12:55990720-55991940	0	+	55990720	55990720	8553170	2	84,581,	0,639,
#Partially deleted in new
chr12	55997179	56005525	chr12:55997179-56005525	3	+	56002221	56005027	0	4	160,60,178,1908,	0,5032,5363,6438,
#Partially deleted in new
chr12	55997230	56005525	chr12:55997230-56005525	1	+	56002221	56005027	0	5	109,109,60,178,1908,	0,384,4981,5312,6387,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	55997258	56001905	chr12:55997258-56001905	0	+	55997258	55997258	8553170	4	81,109,258,99,	0,356,2074,4548,
#Partially deleted in new
chr12	55997258	56003965	chr12:55997258-56003965	0	+	55997258	55997258	8553170	4	81,109,60,348,	0,356,4953,6359,
#Partially deleted in new
chr12	55997258	56003813	chr12:55997258-56003813	0	+	55997258	55997258	8553170	2	81,196,	0,6359,
#Partially deleted in new
chr12	55997286	56004067	chr12:55997286-56004067	0	+	55997286	55997286	8553170	3	53,60,450,	0,4925,6331,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	55997287	56005486	chr12:55997287-56005486	1	+	56002221	56005027	0	6	52,109,126,60,178,1869,	0,327,2045,4924,5255,6330,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	55997288	56002620	chr12:55997288-56002620	0	+	56002221	56002620	789624	5	51,109,258,60,78,	0,326,2044,4923,5254,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	55997295	56003752	chr12:55997295-56003752	0	+	56002221	56003752	789624	5	44,126,60,178,135,	0,2037,4916,5247,6322,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	55997297	56005525	chr12:55997297-56005525	1	+	56002221	56005027	0	5	42,164,60,178,1908,	0,4011,4914,5245,6320,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	55997317	56003054	chr12:55997317-56003054	0	+	55997317	55997317	8553170	4	22,109,60,512,	0,297,4894,5225,
#Partially deleted in new
chr12	55997318	56003923	chr12:55997318-56003923	0	+	55997318	55997318	8553170	5	21,109,60,117,306,	0,296,4893,5285,6299,
#Partially deleted in new
chr12	55997329	56003874	chr12:55997329-56003874	0	+	56002221	56003874	789624	5	394,63,60,178,257,	0,4556,4882,5213,6288,
#Partially deleted in new
chr12	55997614	56004673	chr12:55997614-56004673	1	+	56002221	56004201	789624	5	109,60,178,39,520,	0,4597,4928,6003,6539,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	56001497	56005525	chr12:56001497-56005525	1	+	56002221	56005027	0	3	774,178,1908,	0,1045,2120,
#Partially deleted in new
chr12	56001738	56003734	chr12:56001738-56003734	0	+	56001738	56001738	8553170	3	210,509,117,	0,473,1879,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	56002213	56006641	chr12:56002213-56006641	0	+	56002221	56005027	0	5	58,178,1627,430,218,	0,329,1404,3241,4210,
#Partially deleted in new
chr12	56007658	56038435	chr12:56007658-56038435	3	+	56021493	56035331	0	12	76,78,52,98,150,94,105,261,168,150,132,3865,	0,3758,10467,11659,13772,16012,17395,19122,20121,24902,25531,26912,
#Partially deleted in new
chr12	56007668	56032604	chr12:56007668-56032604	0	+	56007668	56007668	8553170	6	66,52,105,261,168,44,	0,10457,17385,19112,20111,24892,
#Deleted in new
chr12	56010090	56010574	chr12:56010090-56010574	3	-	56010090	56010090	8553170	1	484,	0,
#Partially deleted in new
chr12	56011135	56026804	chr12:56011135-56026804	0	+	56011135	56011135	8553170	4	359,55,105,24,	0,6987,13918,15645,
#Partially deleted in new
chr12	56011557	56021523	chr12:56011557-56021523	0	+	56021493	56021523	789624	4	180,52,95,93,	0,6568,7763,9873,
#Partially deleted in new
chr12	56019319	56038435	chr12:56019319-56038435	1	+	56021493	56035331	0	9	96,150,94,105,261,168,150,132,3865,	0,2111,4351,5734,7461,8460,13241,13870,15251,
#Partially deleted in new
chr12	56019319	56026827	chr12:56019319-56026827	0	+	56019319	56019319	8553170	4	96,244,105,47,	0,5342,5734,7461,
#Partially deleted in new
chr12	56021047	56036904	chr12:56021047-56036904	0	+	56021493	56025113	789624	7	533,105,261,168,150,132,2334,	0,4006,5733,6732,11513,12142,13523,
#Partially deleted in new
chr12	56021079	56035698	chr12:56021079-56035698	1	+	56021493	56035331	0	8	501,94,105,261,168,150,132,1128,	0,2591,3974,5701,6700,11481,12110,13491,
#Partially deleted in new
chr12	56021315	56035331	chr12:56021315-56035331	1	+	56021404	56035331	789624	7	135,105,261,168,150,132,761,	0,3738,5465,6464,11245,11874,13255,
#Partially deleted in new
chr12	56021345	56024884	chr12:56021345-56024884	0	+	56021345	56021345	8553170	3	235,94,223,	0,2325,3316,
#Partially deleted in new
chr12	56021802	56027900	chr12:56021802-56027900	0	+	56021802	56021802	8553170	5	59,94,105,261,121,	0,1868,3251,4978,5977,
#Partially deleted in new
chr12	56024739	56037836	chr12:56024739-56037836	0	+	56024739	56024739	8553170	6	419,261,168,150,132,3266,	0,2041,3040,7821,8450,9831,
#Partially deleted in new
chr12	56029648	56041806	chr12:56029648-56041806	3	-	56029648	56029648	8553170	2	118,182,	0,11976,
#Partially deleted in new
chr12	56032279	56034600	chr12:56032279-56034600	0	+	56032279	56032279	8553170	3	431,132,30,	0,910,2291,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	56041350	56044676	chr12:56041350-56044676	3	+	56042166	56044154	0	5	46,359,178,131,558,	0,460,1074,2012,2768,
#Partially deleted in new
chr12	56041892	56044223	chr12:56041892-56044223	1	+	56042166	56044154	0	5	172,37,178,131,105,	0,240,532,1470,2226,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	56041917	56044697	chr12:56041917-56044697	1	+	56042166	56044154	0	4	252,178,131,579,	0,507,1445,2201,
#Partially deleted in new
chr12	56042139	56044223	chr12:56042139-56044223	0	+	56042139	56042139	8553170	3	30,1069,105,	0,285,1979,
#Partially deleted in new
chr12	56076798	56083902	chr12:56076798-56083902	0	+	56083845	56083902	789624	2	85,152,	0,6952,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	56076911	56078561	chr12:56076911-56078561	0	+	56076911	56076911	8553170	2	128,168,	0,1482,
#Partially deleted in new
chr12	56079856	56086635	chr12:56079856-56086635	0	+	56083845	56086635	789624	5	78,38,152,187,105,	0,488,3894,5138,6674,
#Partially deleted in new
chr12	56079856	56085139	chr12:56079856-56085139	0	+	56080300	56085139	789624	4	78,186,152,145,	0,340,3894,5138,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr12	56079860	56103505	chr12:56079860-56103505	3	+	56080300	56102055	0	28	522,152,187,126,66,119,142,114,121,74,91,206,133,91,155,54,142,120,99,186,156,76,147,98,192,72,301,1977,	0,3890,5134,6670,7716,7934,8160,8682,8887,12886,13125,13484,13903,14238,14541,15396,15804,16642,16887,17184,17924,18639,18898,19787,19977,20313,21200,21668,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	56080136	56085623	chr12:56080136-56085623	1	+	56080300	56085312	0	3	246,152,629,	0,3614,4858,
#Partially deleted in new
chr12	56080166	56096769	chr12:56080166-56096769	0	+	56080300	56095288	789624	6	158,76,54,142,120,22,	0,14314,15090,15498,16336,16581,
#Partially deleted in new
chr12	56080167	56102092	chr12:56080167-56102092	0	+	56080300	56098649	789624	27	215,152,187,126,66,119,142,114,121,74,91,206,133,91,155,54,142,120,99,186,156,406,98,192,72,301,564,	0,3583,4827,6363,7409,7627,7853,8375,8580,12579,12818,13177,13596,13931,14234,15089,15497,16335,16580,16877,17617,18332,19480,19670,20006,20893,21361,
#Partially deleted in new
chr12	56080203	56086672	chr12:56080203-56086672	0	+	56080203	56080203	8553170	4	179,152,187,142,	0,3547,4791,6327,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	56080204	56102834	chr12:56080204-56102834	0	+	56080300	56100189	0	11	178,152,187,126,66,119,142,114,64,301,1306,	0,3546,4790,6326,7372,7590,7816,8338,19977,20856,21324,
#Partially deleted in new
chr12	56083312	56086631	chr12:56083312-56086631	0	+	56083845	56086631	789624	4	236,152,187,101,	0,438,1682,3218,
#Partially deleted in new
chr12	56083318	56102336	chr12:56083318-56102336	1	+	56083845	56102055	0	29	43,82,152,187,126,66,119,142,114,121,74,91,206,133,91,155,54,142,120,99,186,156,76,147,98,192,72,301,808,	0,148,432,1676,3212,4258,4476,4702,5224,5429,9428,9667,10026,10445,10780,11083,11938,12346,13184,13429,13726,14466,15181,15440,16329,16519,16855,17742,18210,
#Partially deleted in new
chr12	56086518	56088064	chr12:56086518-56088064	0	+	56086518	56086518	8553170	3	138,337,44,	0,1058,1502,
#Deleted in new
chr12	56087823	56088868	chr12:56087823-56088868	0	+	56087823	56087823	8553170	3	339,114,121,	0,719,924,
#Deleted in new
chr12	56088628	56088996	chr12:56088628-56088996	0	+	56088628	56088628	8553170	2	28,249,	0,119,
#Partially deleted in new
chr12	56093482	56096063	chr12:56093482-56096063	0	+	56093482	56093482	8553170	6	68,133,458,54,142,116,	0,281,616,1774,2182,2465,
#Deleted in new
chr12	56093513	56093992	chr12:56093513-56093992	0	+	56093513	56093972	789624	2	37,229,	0,250,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	56093831	56102834	chr12:56093831-56102834	0	+	56093831	56102055	789624	13	65,91,155,54,142,30,76,147,98,192,72,301,1306,	0,267,570,1425,1833,2671,4668,4927,5816,6006,6342,7229,7697,
#Partially deleted in new
chr12	56094521	56095527	chr12:56094521-56095527	0	+	56094521	56094521	8553170	2	35,271,	0,735,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	56095990	56102806	chr12:56095990-56102806	1	+	56097047	56102055	789624	11	632,99,186,156,76,147,98,192,72,301,1278,	0,757,1054,1794,2509,2768,3657,3847,4183,5070,5538,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	56097133	56098980	chr12:56097133-56098980	0	+	56097133	56097133	8553170	4	97,156,76,222,	0,651,1366,1625,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	56098250	56103499	chr12:56098250-56103499	1	+	56098706	56102055	789624	6	655,98,192,72,301,1971,	0,1397,1587,1923,2810,3278,
#Deleted in new
chr12	56099865	56100300	chr12:56099865-56100300	0	+	56099865	56099865	8553170	2	164,127,	0,308,
#Partially deleted in new
chr12	56101330	56109289	chr12:56101330-56109289	3	+	56101339	56109289	789624	6	31,129,106,70,93,60,	0,5257,5659,5856,6190,7899,
#Partially deleted in new
chr12	56104318	56113861	chr12:56104318-56113861	3	+	56104737	56112888	0	13	507,129,106,70,93,64,79,79,134,95,128,54,1039,	0,2269,2671,2868,3202,4911,5538,6080,6240,6645,6863,7157,8504,
#Partially deleted in new
chr12	56104536	56113907	chr12:56104536-56113907	1	+	56104737	56113878	789624	10	289,129,106,70,93,64,79,79,119,57,	0,2051,2453,2650,2984,4693,5320,5862,6022,9314,
#Partially deleted in new
chr12	56104613	56113905	chr12:56104613-56113905	3	-	56104613	56104613	8553170	2	169,265,	0,9027,
#Partially deleted in new
chr12	56104918	56109901	chr12:56104918-56109901	0	+	56105043	56109901	789624	7	180,129,106,70,93,64,45,	0,1669,2071,2268,2602,4311,4938,
#Deleted in new
chr12	56106161	56107219	chr12:56106161-56107219	0	+	56106661	56107219	789624	3	555,106,33,	0,828,1025,
#Partially deleted in new
chr12	56106692	56109928	chr12:56106692-56109928	0	+	56106692	56106692	8553170	5	24,267,93,64,72,	0,297,828,2537,3164,
#Partially deleted in new
chr12	56109868	56110620	chr12:56109868-56110620	0	+	56109868	56109868	8553170	2	67,222,	0,530,
#Deleted in new
chr12	56110564	56111509	chr12:56110564-56111509	0	+	56110564	56110564	8553170	2	745,34,	0,911,
#Deleted in new
chr12	56116585	56117943	chr12:56116585-56117943	3	+	56116787	56117524	0	3	214,23,462,	0,603,896,
#Deleted in new
chr12	56116589	56117832	chr12:56116589-56117832	1	+	56116787	56117524	0	4	70,25,23,351,	0,185,599,892,
#Deleted in new
chr12	56116631	56117710	chr12:56116631-56117710	0	+	56116631	56116631	8553170	4	28,55,23,229,	0,143,557,850,
#Deleted in new
chr12	56116632	56117826	chr12:56116632-56117826	0	+	56116632	56116632	8553170	4	27,156,23,345,	0,142,556,849,
#Deleted in new
chr12	56116767	56117687	chr12:56116767-56117687	0	+	56116767	56116767	8553170	2	32,206,	0,714,
#Deleted in new
chr12	56116780	56117645	chr12:56116780-56117645	0	+	56116780	56116780	8553170	2	431,164,	0,701,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	56118158	56127514	chr12:56118158-56127514	3	+	56120562	56121867	789624	3	160,64,7004,	0,929,2352,
#Partially deleted in new
chr12	56118249	56131099	chr12:56118249-56131099	0	+	56128682	56131099	789624	6	69,64,170,42,135,60,	0,838,10290,12332,12541,12790,
#Deleted in new
chr12	56118259	56120799	chr12:56118259-56120799	0	+	56120562	56120799	789624	3	59,204,289,	0,688,2251,
#Deleted in new
chr12	56118261	56119620	chr12:56118261-56119620	0	+	56118261	56118261	8553170	2	57,533,	0,826,
#Deleted in new
chr12	56118320	56120698	chr12:56118320-56120698	0	+	56120562	56120698	789624	2	831,188,	0,2190,
#Deleted in new
chr12	56118406	56120828	chr12:56118406-56120828	0	+	56120562	56120828	789624	3	361,64,318,	0,681,2104,
#Deleted in new
chr12	56118967	56119939	chr12:56118967-56119939	3	-	56118967	56118967	8553170	2	454,16,	0,956,
#Partially deleted in new
chr12	56120032	56129619	chr12:56120032-56129619	3	-	56120032	56120032	8553170	3	33,147,379,	0,8486,9208,
#Partially deleted in new
chr12	56120689	56128854	chr12:56120689-56128854	1	-	56120689	56120689	8553170	3	347,199,336,	0,1350,7829,
#Partially deleted in new
chr12	56128055	56144671	chr12:56128055-56144671	3	+	56128319	56143862	789624	31	654,42,135,74,73,90,56,124,177,83,49,87,93,72,87,150,156,177,83,49,90,96,72,87,141,155,99,132,106,50,849,	0,2526,2735,2984,3188,3421,3693,4153,4365,4663,5361,5532,5725,6054,6286,8688,9162,9443,9776,9970,10127,10348,10712,10871,14229,14522,14779,14961,15172,15524,15767,
#Partially deleted in new
chr12	56128266	56144041	chr12:56128266-56144041	1	+	56128319	56143862	789624	31	443,42,135,74,73,90,56,124,177,83,49,87,93,102,87,150,156,177,83,49,90,96,72,87,141,155,99,132,106,50,219,	0,2315,2524,2773,2977,3210,3482,3942,4154,4452,5150,5321,5514,5813,6075,8477,8951,9232,9565,9759,9916,10137,10501,10660,14018,14311,14568,14750,14961,15313,15556,
#Deleted in new
chr12	56130332	56131286	chr12:56130332-56131286	0	+	56130332	56130332	8553170	4	291,135,74,43,	0,458,707,911,
#Deleted in new
chr12	56130854	56132290	chr12:56130854-56132290	0	+	56130854	56130854	8553170	5	71,277,90,56,82,	0,185,622,894,1354,
#Deleted in new
chr12	56137341	56138435	chr12:56137341-56138435	0	+	56137341	56137341	8553170	5	32,177,83,49,253,	0,157,490,684,841,
#Partially deleted in new
chr12	56138025	56142931	chr12:56138025-56142931	0	+	56138025	56138025	8553170	7	49,90,96,72,87,155,97,	0,157,378,742,901,4552,4809,
#Partially deleted in new
chr12	56138515	56142421	chr12:56138515-56142421	0	+	56138515	56138515	8553170	3	324,87,137,	0,411,3769,
#Partially deleted in new
chr12	56138929	56143017	chr12:56138929-56143017	0	+	56138929	56138929	8553170	4	84,141,155,183,	0,3355,3648,3905,
#Deleted in new
chr12	56143482	56144391	chr12:56143482-56144391	0	+	56143482	56143482	8553170	2	147,569,	0,340,
#Partially deleted in new
chr12	56150795	56158220	chr12:56150795-56158220	3	-	56150795	56150795	8553170	3	190,312,38,	0,6838,7387,
#Partially deleted in new
chr12	56152255	56157982	chr12:56152255-56157982	3	+	56153918	56157726	0	7	376,220,28,144,174,78,285,	0,1617,2557,2799,3163,5212,5442,
#Partially deleted in new
chr12	56152438	56157976	chr12:56152438-56157976	1	+	56153918	56157726	0	8	193,284,28,144,174,78,38,95,	0,1370,2374,2616,2980,5029,5259,5443,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	56152589	56156242	chr12:56152589-56156242	0	+	56152589	56152589	8553170	5	42,220,28,144,824,	0,1283,2223,2465,2829,
#Deleted in new
chr12	56152589	56154005	chr12:56152589-56154005	0	+	56153918	56154005	789624	2	42,520,	0,896,
#Partially deleted in new
chr12	56152606	56157976	chr12:56152606-56157976	1	+	56153918	56157726	789624	8	25,220,28,144,75,78,38,95,	0,1266,2206,2448,2812,4861,5091,5275,
#Deleted in new
chr12	56153871	56155989	chr12:56153871-56155989	0	+	56153871	56153871	8553170	5	221,28,144,174,72,	0,941,1183,1547,2046,
#Partially deleted in new
chr12	56153892	56157976	chr12:56153892-56157976	0	+	56153892	56153892	8553170	6	200,386,174,78,38,95,	0,920,1526,3575,3805,3989,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	56156936	56157975	chr12:56156936-56157975	0	+	56156936	56156936	8553170	2	609,278,	0,761,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	56157356	56157976	chr12:56157356-56157976	0	+	56157356	56157356	8553170	3	189,38,95,	0,341,525,
#Deleted in new
chr12	56157449	56159647	chr12:56157449-56159647	0	+	56157449	56157449	8553170	4	96,38,28,61,	0,248,1234,2137,
#Deleted in new
chr12	56157614	56157981	chr12:56157614-56157981	0	+	56157614	56157614	8553170	2	121,100,	0,267,
#Deleted in new
chr12	56158160	56161574	chr12:56158160-56161574	3	+	56158401	56160654	789624	7	244,28,144,174,78,45,188,	0,523,1426,1814,2082,2465,3226,
#Deleted in new
chr12	56158345	56161575	chr12:56158345-56161575	1	+	56158401	56161415	789624	5	59,28,174,78,189,	0,338,1629,1897,3041,
#Deleted in new
chr12	56158348	56161550	chr12:56158348-56161550	0	+	56158348	56158348	8553170	6	56,1047,174,78,45,164,	0,335,1626,1894,2277,3038,
#Deleted in new
chr12	56158355	56161574	chr12:56158355-56161574	1	+	56158401	56161415	789624	6	49,31,144,174,78,188,	0,325,1231,1619,1887,3031,
#Deleted in new
chr12	56158355	56161587	chr12:56158355-56161587	1	+	56158401	56160654	789624	7	49,31,144,174,78,45,201,	0,325,1231,1619,1887,2270,3031,
#Deleted in new
chr12	56158355	56160320	chr12:56158355-56160320	0	+	56158355	56158355	8553170	5	49,28,125,174,78,	0,328,1142,1619,1887,
#Deleted in new
chr12	56158356	56161574	chr12:56158356-56161574	1	+	56160111	56161415	789624	6	48,28,36,124,78,188,	0,327,1230,1668,1886,3030,
#Deleted in new
chr12	56158357	56160280	chr12:56158357-56160280	0	+	56158357	56158357	8553170	4	47,28,562,38,	0,326,1229,1885,
#Deleted in new
chr12	56158357	56161465	chr12:56158357-56161465	1	+	56158401	56161415	789624	4	354,174,78,79,	0,1617,1885,3029,
#Deleted in new
chr12	56158361	56160795	chr12:56158361-56160795	1	+	56158401	56160331	789624	4	350,144,174,553,	0,1225,1613,1881,
#Deleted in new
chr12	56158361	56161574	chr12:56158361-56161574	1	+	56158401	56161415	789624	6	43,28,144,174,78,188,	0,322,1225,1613,1881,3025,
#Deleted in new
chr12	56158363	56160343	chr12:56158363-56160343	0	+	56158363	56158363	8553170	4	41,28,144,369,	0,320,1223,1611,
#Deleted in new
chr12	56158367	56163008	chr12:56158367-56163008	1	+	56158401	56162322	789624	7	37,28,144,174,78,68,154,	0,316,1219,1607,1875,3896,4487,
#Deleted in new
chr12	56158368	56161298	chr12:56158368-56161298	1	+	56158401	56160331	789624	5	36,28,144,174,1056,	0,315,1218,1606,1874,
#Deleted in new
chr12	56158370	56160148	chr12:56158370-56160148	0	+	56158370	56158370	8553170	5	34,28,39,144,174,	0,313,531,1216,1604,
#Deleted in new
chr12	56158372	56159791	chr12:56158372-56159791	0	+	56158372	56158372	8553170	2	339,205,	0,1214,
#Deleted in new
chr12	56158381	56161575	chr12:56158381-56161575	1	+	56158401	56160654	789624	7	23,28,36,174,78,45,189,	0,302,1205,1593,1861,2244,3005,
#Deleted in new
chr12	56158381	56160320	chr12:56158381-56160320	0	+	56158401	56160320	789624	5	23,28,108,174,78,	0,302,1241,1593,1861,
#Deleted in new
chr12	56158395	56160945	chr12:56158395-56160945	1	+	56158401	56160654	789624	6	9,28,144,174,78,320,	0,288,1191,1579,1847,2230,
#Deleted in new
chr12	56160035	56162970	chr12:56160035-56162970	0	+	56160035	56162322	789624	5	113,78,68,77,116,	0,207,2228,2527,2819,
#Deleted in new
chr12	56161780	56163496	chr12:56161780-56163496	0	+	56161780	56161780	8553170	2	551,642,	0,1074,
#Partially deleted in new
chr12	56162358	56190284	chr12:56162358-56190284	3	-	56162358	56162358	8553170	2	191,212,	0,27714,
#Partially deleted in new
chr12	56162982	56189567	chr12:56162982-56189567	1	-	56163688	56189461	789624	30	783,66,84,382,135,167,136,65,162,259,63,120,93,154,114,72,131,38,60,125,116,132,76,70,70,93,82,86,120,217,	0,1320,1665,2335,5077,6546,6793,7161,8288,8696,9445,9602,9954,10713,11668,15039,15421,15827,16014,17994,18499,18721,19021,20878,21192,21861,22047,23172,24204,26368,
#Partially deleted in new
chr12	56163327	56189476	chr12:56163327-56189476	1	-	56163688	56189461	789624	29	438,429,382,135,167,136,65,162,259,63,120,93,154,114,72,131,38,60,125,116,132,76,70,70,93,82,86,120,126,	0,975,1990,4732,6201,6448,6816,7943,8351,9100,9257,9609,10368,11323,14694,15076,15482,15669,17649,18154,18376,18676,20533,20847,21516,21702,22827,23859,26023,
#Partially deleted in new
chr12	56163329	56189548	chr12:56163329-56189548	1	-	56163688	56189461	789624	29	436,84,382,135,167,136,65,162,259,63,120,93,154,114,72,131,38,60,125,116,132,76,70,70,93,82,86,120,198,	0,1318,1988,4730,6199,6446,6814,7941,8349,9098,9255,9607,10366,11321,14692,15074,15480,15667,17647,18152,18374,18674,20531,20845,21514,21700,22825,23857,26021,
#Partially deleted in new
chr12	56163344	56189548	chr12:56163344-56189548	3	-	56163688	56189461	789624	28	421,429,382,135,167,136,65,162,259,63,120,154,114,72,131,38,60,125,116,132,76,70,70,93,82,86,120,198,	0,958,1973,4715,6184,6431,6799,7926,8334,9083,9240,10351,11306,14677,15059,15465,15652,17632,18137,18359,18659,20516,20830,21499,21685,22810,23842,26006,
#Partially deleted in new
chr12	56163344	56189473	chr12:56163344-56189473	0	-	56185091	56189461	789624	29	421,84,382,135,167,136,65,162,259,63,120,93,154,114,72,131,38,60,125,116,132,76,70,70,93,63,86,120,123,	0,1303,1973,4715,6184,6431,6799,7926,8334,9083,9240,9592,10351,11306,14677,15059,15465,15652,17632,18137,18359,18659,20516,20830,21499,21685,22810,23842,26006,
#Partially deleted in new
chr12	56171393	56174713	chr12:56171393-56174713	0	-	56171393	56171393	8553170	5	39,63,120,154,63,	0,1034,1191,2302,3257,
#Partially deleted in new
chr12	56171876	56181126	chr12:56171876-56181126	0	-	56171876	56171876	8553170	9	61,63,120,154,114,72,444,60,150,	0,551,708,1819,2774,6145,6527,7120,9100,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	56172238	56174732	chr12:56172238-56174732	0	-	56172238	56172238	8553170	4	252,120,154,82,	0,346,1457,2412,
#Partially deleted in new
chr12	56174530	56178631	chr12:56174530-56178631	0	-	56174530	56174530	8553170	3	234,72,228,	0,3491,3873,
#Partially deleted in new
chr12	56178818	56184248	chr12:56178818-56184248	0	-	56178818	56178818	8553170	7	29,60,621,132,76,70,74,	0,178,2158,2885,3185,5042,5356,
#Partially deleted in new
chr12	56181747	56189543	chr12:56181747-56189543	0	-	56185091	56189461	789624	8	88,76,70,93,63,86,120,193,	0,256,2427,3096,3282,4407,5439,7603,
#Partially deleted in new
chr12	56181747	56189391	chr12:56181747-56189391	0	-	56181747	56181747	8553170	8	88,76,70,93,82,86,120,41,	0,256,2427,3096,3282,4407,5439,7603,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	56183323	56189483	chr12:56183323-56189483	0	-	56183323	56183323	8553170	3	2403,708,133,	0,3275,6027,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	56183878	56185223	chr12:56183878-56185223	0	-	56183878	56183878	8553170	4	52,70,93,194,	0,296,965,1151,
#Partially deleted in new
chr12	56185789	56189520	chr12:56185789-56189520	0	-	56185789	56185789	8553170	3	451,120,170,	0,1397,3561,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	56202174	56221921	chr12:56202174-56221921	3	-	56206446	56214047	0	7	4624,104,136,272,113,185,162,	0,5471,5988,8122,11783,14254,19585,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	56202503	56221701	chr12:56202503-56221701	1	-	56206446	56214047	0	7	4295,104,136,272,113,185,111,	0,5142,5659,7793,11454,13925,19087,
#Partially deleted in new
chr12	56205449	56221909	chr12:56205449-56221909	1	-	56206446	56210445	0	8	1349,104,136,272,143,113,185,150,	0,2196,2713,4847,7546,8508,10979,16310,
#Partially deleted in new
chr12	56205449	56221866	chr12:56205449-56221866	0	-	56207306	56210445	789624	9	1349,143,104,136,272,143,113,185,107,	0,1718,2196,2713,4847,7546,8508,10979,16310,
#Partially deleted in new
chr12	56206446	56221933	chr12:56206446-56221933	1	-	56206446	56214047	0	7	352,104,136,272,113,185,31,	0,1199,1716,3850,7511,9982,15456,
#Partially deleted in new
chr12	56206586	56208544	chr12:56206586-56208544	0	-	56206586	56206586	8553170	3	212,104,382,	0,1059,1576,
#Partially deleted in new
chr12	56206748	56221922	chr12:56206748-56221922	0	-	56206748	56210445	789624	5	50,104,136,272,20,	0,897,1414,3548,15154,
#Partially deleted in new
chr12	56207638	56221843	chr12:56207638-56221843	1	-	56207641	56214047	789624	5	111,136,272,113,84,	0,524,2658,6319,14121,
#Partially deleted in new
chr12	56207676	56221701	chr12:56207676-56221701	0	-	56207676	56214047	789624	6	73,136,272,113,185,111,	0,486,2620,6281,8752,13914,
#Partially deleted in new
chr12	56208147	56216606	chr12:56208147-56216606	0	-	56210554	56214047	789624	5	151,272,82,113,178,	0,2149,4848,5810,8281,
#Partially deleted in new
chr12	56210036	56221860	chr12:56210036-56221860	0	-	56210036	56210036	8553170	5	532,70,113,185,101,	0,2955,3921,6392,11723,
#Partially deleted in new
chr12	56210247	56214018	chr12:56210247-56214018	0	-	56210247	56210247	8553170	3	321,143,61,	0,2748,3710,
#Partially deleted in new
chr12	56222014	56229032	chr12:56222014-56229032	0	+	56224856	56229032	789624	7	185,102,139,72,82,64,19,	0,2819,3358,3609,4164,4341,6999,
#Partially deleted in new
chr12	56222014	56226416	chr12:56222014-56226416	0	+	56224856	56226416	789624	7	185,129,102,139,72,82,61,	0,1569,2819,3358,3609,4164,4341,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	56224324	56229854	chr12:56224324-56229854	3	+	56224856	56229213	0	7	117,102,139,72,82,64,841,	0,509,1048,1299,1854,2031,4689,
#Partially deleted in new
chr12	56224356	56226419	chr12:56224356-56226419	0	+	56224356	56224356	8553170	4	579,139,72,241,	0,1016,1267,1822,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	56224358	56229854	chr12:56224358-56229854	1	+	56224856	56229213	0	6	577,139,72,82,64,841,	0,1014,1265,1820,1997,4655,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	56224400	56229844	chr12:56224400-56229844	1	+	56224856	56229213	0	7	121,102,139,72,82,64,831,	0,433,972,1223,1778,1955,4613,
#Partially deleted in new
chr12	56230048	56232869	chr12:56230048-56232869	0	+	56231274	56232869	789624	3	74,358,181,	0,1155,2640,
#Partially deleted in new
chr12	56230048	56232772	chr12:56230048-56232772	0	+	56231274	56232772	789624	4	74,43,358,84,	0,782,1155,2640,
#Deleted in new
chr12	56230055	56230717	chr12:56230055-56230717	0	+	56230055	56230055	8553170	2	67,478,	0,184,
#Partially deleted in new
chr12	56230062	56237846	chr12:56230062-56237846	3	+	56231274	56237731	789624	13	60,56,43,358,184,163,170,141,97,165,81,191,259,	0,177,768,1141,2626,4761,5094,5497,6333,6519,6868,7087,7525,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	56230062	56235812	chr12:56230062-56235812	0	+	56230062	56230062	8553170	6	60,96,184,163,170,253,	0,1403,2626,4761,5094,5497,
#Partially deleted in new
chr12	56230066	56232787	chr12:56230066-56232787	0	+	56231274	56232787	789624	4	56,56,358,99,	0,173,1137,2622,
#Partially deleted in new
chr12	56230082	56235326	chr12:56230082-56235326	0	+	56231274	56235326	789624	7	40,43,86,185,184,163,170,	0,748,1121,1294,2606,4741,5074,
#Partially deleted in new
chr12	56230651	56237846	chr12:56230651-56237846	1	+	56231274	56237731	789624	11	222,358,184,163,170,141,97,165,81,191,259,	0,552,2037,4172,4505,4908,5744,5930,6279,6498,6936,
#Partially deleted in new
chr12	56230761	56232779	chr12:56230761-56232779	0	+	56231274	56232779	789624	3	139,358,91,	0,442,1927,
#Deleted in new
chr12	56236659	56237814	chr12:56236659-56237814	0	+	56236659	56236659	8553170	3	87,81,665,	0,271,490,
#Deleted in new
chr12	56236703	56237843	chr12:56236703-56237843	0	+	56236703	56236703	8553170	3	43,81,256,	0,227,884,
#Partially deleted in new
chr12	56237806	56258391	chr12:56237806-56258391	3	-	56243141	56258269	789624	28	5586,92,83,83,146,84,88,220,118,88,202,72,112,81,141,69,118,83,115,79,213,143,88,201,71,79,84,149,	0,5978,6244,6546,6845,7099,7296,7570,9686,9880,10216,10688,10952,14208,14368,14695,14973,15197,15481,15915,16260,16771,17058,17977,19208,19476,20021,20436,
#Deleted in new
chr12	56237806	56244727	chr12:56237806-56244727	0	-	56237806	56237806	8553170	6	162,155,92,83,83,76,	0,5431,5978,6244,6546,6845,
#Deleted in new
chr12	56254086	56255084	chr12:56254086-56255084	0	-	56254086	56254086	8553170	3	193,143,220,	0,491,778,
#Partially deleted in new
chr12	56254229	56257068	chr12:56254229-56257068	0	-	56254229	56254229	8553170	4	50,88,201,54,	0,635,1554,2785,
#Partially deleted in new
chr12	56266857	56270964	chr12:56266857-56270964	3	+	56267118	56270317	789624	5	395,147,193,102,815,	0,936,2201,2602,3292,
#Deleted in new
chr12	56266889	56268084	chr12:56266889-56268084	0	+	56266889	56266889	8553170	2	363,291,	0,904,
#Partially deleted in new
chr12	56266890	56270469	chr12:56266890-56270469	0	+	56266890	56266890	8553170	4	362,147,503,320,	0,903,2168,3259,
#Partially deleted in new
chr12	56267282	56270966	chr12:56267282-56270966	1	+	56267395	56270317	789624	5	151,147,193,102,817,	0,511,1776,2177,2867,
#Partially deleted in new
chr12	56267284	56269427	chr12:56267284-56269427	0	+	56267284	56267284	8553170	3	149,147,369,	0,509,1774,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	56267328	56268395	chr12:56267328-56268395	0	+	56267328	56267328	8553170	2	105,602,	0,465,
#Partially deleted in new
chr12	56267681	56270964	chr12:56267681-56270964	1	+	56267710	56270317	789624	4	259,193,102,815,	0,1377,1778,2468,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	56267792	56270104	chr12:56267792-56270104	3	-	56267792	56267792	8553170	2	319,223,	0,2089,
#Partially deleted in new
chr12	56267799	56270649	chr12:56267799-56270649	0	+	56267799	56270317	789624	4	141,50,102,500,	0,1259,1660,2350,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	56268116	56270458	chr12:56268116-56270458	0	+	56268116	56268116	8553170	3	1135,102,309,	0,1343,2033,
#Partially deleted in new
chr12	56269535	56270665	chr12:56269535-56270665	0	+	56269535	56270317	789624	3	26,169,215,	0,614,915,
#Partially deleted in new
chr12	56271698	56300318	chr12:56271698-56300318	0	-	56283816	56300201	789624	11	1556,210,102,130,200,189,132,66,46,21,159,	0,1888,3078,3303,4297,10721,11161,12093,14217,14926,28461,
#Partially deleted in new
chr12	56271700	56300392	chr12:56271700-56300392	3	-	56273083	56300201	0	11	1554,210,102,130,200,189,132,66,108,51,233,	0,1886,3076,3301,4295,10719,11159,12091,14215,14894,28459,
#Partially deleted in new
chr12	56271700	56300391	chr12:56271700-56300391	1	-	56273083	56285918	789624	12	1554,210,102,130,200,189,132,66,108,51,83,232,	0,1886,3076,3301,4295,10719,11159,12091,14215,14894,26908,28459,
#Partially deleted in new
chr12	56271702	56274815	chr12:56271702-56274815	0	-	56271881	56274815	789624	4	189,113,210,39,	0,1439,1884,3074,
#Partially deleted in new
chr12	56272807	56300330	chr12:56272807-56300330	1	-	56273083	56291222	0	12	447,210,102,130,200,189,132,66,108,51,87,171,	0,779,1969,2194,3188,9612,10052,10984,13108,13787,18412,27352,
#Partially deleted in new
chr12	56273195	56286091	chr12:56273195-56286091	0	-	56273195	56273195	8553170	8	601,102,47,200,189,132,66,176,	0,1581,1806,2800,9224,9664,10596,12720,
#Partially deleted in new
chr12	56273745	56286008	chr12:56273745-56286008	0	-	56276050	56286008	789624	8	51,102,130,148,189,132,66,93,	0,1031,1256,2250,8674,9114,10046,12170,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	56274015	56275941	chr12:56274015-56275941	0	-	56274015	56274015	8553170	2	863,940,	0,986,
#Partially deleted in new
chr12	56275000	56300376	chr12:56275000-56300376	0	-	56282545	56300201	789624	7	131,200,189,132,108,51,217,	0,995,7419,7859,10915,11594,25159,
#Partially deleted in new
chr12	56275760	56282510	chr12:56275760-56282510	0	-	56275760	56275760	8553170	2	435,91,	0,6659,
#Partially deleted in new
chr12	56276137	56300333	chr12:56276137-56300333	0	-	56276137	56300201	789624	4	58,189,132,174,	0,6282,6722,24022,
#Partially deleted in new
chr12	56276146	56300330	chr12:56276146-56300330	0	-	56276146	56300201	789624	5	49,189,108,51,171,	0,6273,9769,10448,24013,
#Partially deleted in new
chr12	56276147	56300315	chr12:56276147-56300315	0	-	56276147	56300201	789624	6	48,132,66,108,51,156,	0,6712,7644,9768,10447,24012,
#Partially deleted in new
chr12	56276151	56300341	chr12:56276151-56300341	0	-	56276151	56285918	789624	7	44,189,132,66,108,26,182,	0,6268,6708,7640,9764,10443,24008,
#Partially deleted in new
chr12	56276151	56300006	chr12:56276151-56300006	0	-	56276151	56285918	789624	7	44,189,132,66,108,26,179,	0,6268,6708,7640,9764,10443,23676,
#Partially deleted in new
chr12	56276163	56300023	chr12:56276163-56300023	0	-	56276163	56285918	789624	7	32,189,132,66,108,51,98,	0,6256,6696,7628,9752,10431,23762,
#Partially deleted in new
chr12	56282336	56283821	chr12:56282336-56283821	0	-	56282336	56282336	8553170	3	272,132,30,	0,523,1455,
#Partially deleted in new
chr12	56282384	56283858	chr12:56282384-56283858	0	-	56282384	56282384	8553170	2	607,67,	0,1407,
#Partially deleted in new
chr12	56282426	56300308	chr12:56282426-56300308	0	-	56282426	56300201	789624	5	182,132,66,51,149,	0,433,1365,4168,17733,
#Partially deleted in new
chr12	56282447	56300023	chr12:56282447-56300023	0	-	56282447	56285918	789624	7	161,132,66,108,51,83,196,	0,412,1344,3468,4147,16161,17380,
#Partially deleted in new
chr12	56282456	56299974	chr12:56282456-56299974	0	-	56282456	56285918	789624	6	152,132,66,108,51,147,	0,403,1335,3459,4138,17371,
#Partially deleted in new
chr12	56282465	56300316	chr12:56282465-56300316	0	-	56282465	56285918	789624	8	143,132,66,108,51,163,83,157,	0,394,1326,3450,4129,9165,16143,17694,
#Partially deleted in new
chr12	56282471	56300379	chr12:56282471-56300379	0	-	56282471	56300201	789624	7	137,132,66,108,51,61,34,	0,388,1320,3444,4123,17688,17874,
#Partially deleted in new
chr12	56282496	56300316	chr12:56282496-56300316	0	-	56282496	56300201	789624	6	112,48,66,108,51,157,	0,363,1295,3419,4098,17663,
#Partially deleted in new
chr12	56282567	56300334	chr12:56282567-56300334	0	-	56282567	56285918	789624	6	41,132,66,108,124,175,	0,292,1224,3348,3929,17592,
#Partially deleted in new
chr12	56282860	56300391	chr12:56282860-56300391	0	-	56282860	56285918	789624	6	131,66,108,51,163,232,	0,931,3055,3734,8770,17299,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	56282919	56300317	chr12:56282919-56300317	0	-	56285217	56300201	789624	6	72,66,100,108,51,158,	0,872,2225,2996,3675,17240,
#Partially deleted in new
chr12	56283791	56300391	chr12:56283791-56300391	0	-	56283791	56283791	8553170	4	66,108,149,232,	0,2124,2705,16368,
#Partially deleted in new
chr12	56285915	56315943	chr12:56285915-56315943	3	-	56285915	56315217	789624	9	108,51,61,64,97,204,116,113,123,	0,679,14244,24050,25042,25295,28935,29214,29905,
#Partially deleted in new
chr12	56285961	56316044	chr12:56285961-56316044	0	-	56285961	56315217	789624	5	62,51,116,113,224,	0,633,28889,29168,29859,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	56286159	56300391	chr12:56286159-56300391	0	-	56286159	56286159	8553170	2	486,232,	0,14000,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	56286190	56291758	chr12:56286190-56291758	0	-	56286190	56286190	8553170	2	430,128,	0,5440,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	56286238	56300336	chr12:56286238-56300336	0	-	56286238	56286238	8553170	2	382,177,	0,13921,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	56286266	56300333	chr12:56286266-56300333	0	-	56286266	56286266	8553170	3	379,83,174,	0,12342,13893,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	56286281	56300283	chr12:56286281-56300283	0	-	56286281	56286281	8553170	3	339,83,124,	0,12327,13878,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	56300141	56314788	chr12:56300141-56314788	3	+	56300141	56300141	8553170	3	46,93,260,	0,12265,14387,
#Partially deleted in new
chr12	56300176	56316059	chr12:56300176-56316059	0	-	56300176	56315217	789624	4	44,116,113,239,	0,14674,14953,15644,
#Partially deleted in new
chr12	56300711	56314808	chr12:56300711-56314808	1	+	56300711	56300711	8553170	2	157,280,	0,13817,
#Partially deleted in new
chr12	56309841	56311312	chr12:56309841-56311312	0	-	56310551	56311312	789624	4	188,286,97,102,	0,468,1116,1369,
#Partially deleted in new
chr12	56310427	56316336	chr12:56310427-56316336	3	-	56310551	56315217	789624	6	168,97,204,116,113,516,	0,530,783,4423,4702,5393,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	56310427	56311929	chr12:56310427-56311929	0	-	56310427	56310427	8553170	3	168,97,719,	0,530,783,
#Partially deleted in new
chr12	56310432	56314968	chr12:56310432-56314968	0	-	56311447	56314968	789624	4	163,97,243,118,	0,525,778,4418,
#Partially deleted in new
chr12	56310957	56316050	chr12:56310957-56316050	0	-	56310957	56315217	789624	5	97,204,116,113,144,	0,253,3893,4172,4949,
#Partially deleted in new
chr12	56311000	56315930	chr12:56311000-56315930	0	-	56311000	56314898	789624	4	54,204,116,110,	0,210,3850,4820,
#Partially deleted in new
chr12	56311337	56316119	chr12:56311337-56316119	0	-	56311337	56311337	8553170	4	58,116,113,299,	0,3513,3792,4483,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	56312522	56315206	chr12:56312522-56315206	0	-	56312522	56312522	8553170	3	363,116,77,	0,2328,2607,
#Deleted in new
chr12	56314489	56315750	chr12:56314489-56315750	0	-	56314489	56314489	8553170	3	477,113,34,	0,640,1227,
#Deleted in new
chr12	56314489	56316047	chr12:56314489-56316047	0	-	56314489	56314489	8553170	3	477,113,227,	0,640,1331,
#Deleted in new
chr12	56314507	56316000	chr12:56314507-56316000	0	-	56314507	56314507	8553170	3	459,113,94,	0,622,1399,
#Deleted in new
chr12	56314649	56315897	chr12:56314649-56315897	0	-	56314649	56314649	8553170	2	593,77,	0,1171,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr12	56316222	56333749	chr12:56316222-56333749	1	-	56317608	56333094	789624	26	1421,198,94,180,144,158,91,60,144,148,74,99,107,149,200,129,120,120,97,343,268,78,121,170,396,263,	0,2014,2865,3085,3398,3641,5855,6200,6392,6839,7088,7277,7584,7814,8071,8358,8786,9112,10090,10394,11141,11772,12015,12249,16590,17264,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr12	56316222	56334053	chr12:56316222-56334053	1	-	56317608	56333094	789624	26	1421,198,94,180,144,158,91,60,144,148,74,99,107,149,200,129,120,120,97,343,268,78,121,170,396,192,	0,2014,2865,3085,3398,3641,5855,6200,6392,6839,7088,7277,7584,7814,8071,8358,8786,9112,10090,10394,11141,11772,12015,12249,16590,17639,
#Partially deleted in new
chr12	56316933	56333663	chr12:56316933-56333663	0	-	56316933	56316933	8553170	25	710,198,400,144,158,91,60,144,148,74,99,107,134,200,129,120,120,97,343,268,78,121,170,391,181,	0,1303,2154,2687,2930,5144,5489,5681,6128,6377,6566,6873,7115,7360,7647,8075,8401,9379,9683,10430,11061,11304,11538,15879,16549,
#Partially deleted in new
chr12	56316935	56334053	chr12:56316935-56334053	3	-	56317608	56333094	789624	26	708,198,94,180,144,158,91,60,144,148,74,99,107,137,200,129,120,120,97,343,268,78,121,170,396,192,	0,1301,2152,2372,2685,2928,5142,5487,5679,6126,6375,6564,6871,7113,7358,7645,8073,8399,9377,9681,10428,11059,11302,11536,15877,16926,
#Partially deleted in new
chr12	56316936	56334006	chr12:56316936-56334006	1	-	56317608	56333094	789624	26	707,198,94,180,144,158,91,60,144,148,74,99,107,146,200,129,120,120,97,343,268,78,121,170,396,145,	0,1300,2151,2371,2684,2927,5141,5486,5678,6125,6374,6563,6870,7100,7357,7644,8072,8398,9376,9680,10427,11058,11301,11535,15876,16925,
#Partially deleted in new
chr12	56316940	56324187	chr12:56316940-56324187	0	-	56316940	56316940	8553170	13	703,198,94,180,144,158,91,60,595,74,99,107,139,	0,1296,2147,2367,2680,2923,5137,5482,5674,6370,6559,6866,7108,
#Partially deleted in new
chr12	56316946	56333743	chr12:56316946-56333743	1	-	56317608	56333094	789624	26	697,198,94,180,144,158,91,60,144,148,74,99,107,149,200,129,120,120,97,343,268,78,121,170,391,261,	0,1290,2141,2361,2674,2917,5131,5476,5668,6115,6364,6553,6860,7090,7347,7634,8062,8388,9366,9670,10417,11048,11291,11525,15866,16536,
#Partially deleted in new
chr12	56317347	56318574	chr12:56317347-56318574	0	-	56317347	56317347	8553170	2	296,338,	0,889,
#Partially deleted in new
chr12	56317562	56319489	chr12:56317562-56319489	0	-	56317562	56317562	8553170	2	81,402,	0,1525,
#Partially deleted in new
chr12	56317600	56319489	chr12:56317600-56319489	0	-	56317600	56317600	8553170	3	43,198,182,	0,636,1707,
#Partially deleted in new
chr12	56319394	56322519	chr12:56319394-56322519	0	-	56319394	56319394	8553170	5	93,144,158,91,97,	0,226,469,2683,3028,
#Partially deleted in new
chr12	56319955	56322636	chr12:56319955-56322636	0	-	56319955	56319955	8553170	2	66,559,	0,2122,
#Deleted in new
chr12	56323016	56323906	chr12:56323016-56323906	0	-	56323016	56323016	8553170	3	368,99,100,	0,483,790,
#Partially deleted in new
chr12	56323806	56333937	chr12:56323806-56333937	0	-	56323806	56323806	8553170	12	687,129,120,120,97,343,268,78,121,170,396,76,	0,774,1202,1528,2506,2810,3557,4188,4431,4665,9006,10055,
#Deleted in new
chr12	56323817	56324394	chr12:56323817-56324394	0	-	56323817	56323817	8553170	2	368,101,	0,476,
#Deleted in new
chr12	56323882	56324401	chr12:56323882-56324401	0	-	56323882	56323882	8553170	2	300,108,	0,411,
#Deleted in new
chr12	56324416	56326453	chr12:56324416-56326453	0	-	56324416	56324416	8553170	5	77,129,120,120,141,	0,164,592,918,1896,
#Deleted in new
chr12	56325050	56326415	chr12:56325050-56326415	0	-	56325050	56325050	8553170	2	404,103,	0,1262,
#Partially deleted in new
chr12	56327530	56333976	chr12:56327530-56333976	0	-	56327530	56328506	789624	5	101,78,121,170,115,	0,464,707,941,6331,
#Partially deleted in new
chr12	56327892	56332881	chr12:56327892-56332881	0	-	56327892	56327892	8553170	4	180,121,170,69,	0,345,579,4920,
#Deleted in new
chr12	56332733	56333981	chr12:56332733-56333981	0	-	56332733	56332733	8553170	2	475,120,	0,1128,
#Partially deleted in new
chr12	56334173	56340305	chr12:56334173-56340305	0	+	56334173	56334173	8553170	5	46,54,99,147,363,	0,2856,5252,5517,5769,
#Partially deleted in new
chr12	56334207	56340329	chr12:56334207-56340329	0	+	56334207	56334207	8553170	5	53,54,99,147,387,	0,2822,5218,5483,5735,
#Deleted in new
chr12	56338874	56340410	chr12:56338874-56340410	3	+	56339044	56340104	0	4	332,99,147,468,	0,551,816,1068,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	56341596	56349775	chr12:56341596-56349775	0	-	56341596	56341596	8553170	11	1935,311,58,183,137,95,53,136,99,84,187,	0,2228,4549,4845,5222,6932,7155,7327,7566,7829,7992,
#Partially deleted in new
chr12	56342709	56360074	chr12:56342709-56360074	3	-	56343388	56356571	0	24	822,311,58,183,137,95,53,136,99,84,48,94,21,60,93,159,149,86,76,90,96,154,138,17,	0,1115,3436,3732,4109,5819,6042,6214,6453,6716,6879,7387,7702,8119,8388,8582,11756,12068,12566,12733,12998,13422,13731,17348,
#Partially deleted in new
chr12	56342935	56360126	chr12:56342935-56360126	1	-	56343388	56356571	0	24	596,311,58,183,137,95,53,136,99,84,48,94,21,60,93,159,149,86,76,90,84,154,138,69,	0,889,3210,3506,3883,5593,5816,5988,6227,6490,6653,7161,7476,7893,8162,8356,11530,11842,12340,12507,12772,13196,13505,17122,
#Partially deleted in new
chr12	56344084	56346868	chr12:56344084-56346868	0	-	56344084	56344084	8553170	3	51,58,427,	0,2061,2357,
#Partially deleted in new
chr12	56346677	56348912	chr12:56346677-56348912	0	-	56346677	56346677	8553170	2	278,384,	0,1851,
#Partially deleted in new
chr12	56348997	56360126	chr12:56348997-56360126	1	-	56349371	56356571	789624	16	62,165,48,94,21,60,93,159,149,86,76,90,84,154,138,69,	0,347,591,1099,1414,1831,2100,2294,5468,5780,6278,6445,6710,7134,7443,11060,
#Partially deleted in new
chr12	56349500	56354507	chr12:56349500-56354507	0	-	56349500	56349500	8553170	6	9,48,336,60,93,42,	0,88,596,1328,1597,4965,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	56349859	56351181	chr12:56349859-56351181	0	-	56349859	56349859	8553170	3	573,60,84,	0,969,1238,
#Partially deleted in new
chr12	56351176	56360137	chr12:56351176-56360137	0	-	56351176	56351176	8553170	9	14,159,149,574,90,96,154,138,80,	0,115,3289,3601,4266,4531,4955,5264,8881,
#Partially deleted in new
chr12	56351202	56354872	chr12:56351202-56354872	0	-	56351202	56351202	8553170	3	248,196,95,	0,3216,3575,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	56352386	56352450	chr12:56352386-56352450	3	-	56352386	56352386	8553170	1	64,	0,
#Partially deleted in new
chr12	56354554	56360155	chr12:56354554-56360155	0	-	56354554	56354554	8553170	7	60,574,90,96,87,58,98,	0,223,888,1153,1577,1966,5503,
#Partially deleted in new
chr12	56355272	56360107	chr12:56355272-56360107	0	-	56356214	56356571	789624	6	79,90,96,150,138,50,	0,170,435,859,1168,4785,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	56360568	56362823	chr12:56360568-56362823	3	-	56361224	56362745	789624	2	1621,94,	0,2161,
#Deleted in new
chr12	56376817	56377331	chr12:56376817-56377331	7	-	56376817	56376817	16724991	1	514,	0,
#Partially deleted in new
chr12	56380360	56382711	chr12:56380360-56382711	7	-	56380360	56380360	16724991	4	87,309,378,879,	0,407,748,1472,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	56411943	56413190	chr12:56411943-56413190	3	-	56411943	56411943	8553170	1	1247,	0,
#Partially deleted in new
chr12	56413646	56414045	chr12:56413646-56414045	7	-	56413646	56413646	16724991	1	399,	0,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr12	56416372	56449399	chr12:56416372-56449399	3	-	56417715	56434170	0	29	1414,102,226,119,69,172,143,83,118,86,146,202,124,98,152,138,170,104,218,177,88,134,156,102,63,115,154,158,90,	0,1534,1761,4196,4440,4590,4978,5354,5526,5733,6474,6901,7211,7424,8389,8642,11863,12176,12510,13732,14508,15098,15996,16653,17008,17165,17400,17701,32937,
#Partially deleted in new
chr12	56417118	56449403	chr12:56417118-56449403	1	-	56417715	56434170	0	29	668,102,226,119,69,172,143,83,118,86,146,202,124,98,152,138,170,104,218,177,88,134,153,102,63,115,154,158,94,	0,788,1015,3450,3694,3844,4232,4608,4780,4987,5728,6155,6465,6678,7643,7896,11117,11430,11764,12986,13762,14352,15250,15907,16262,16419,16654,16955,32191,
#Partially deleted in new
chr12	56417126	56424789	chr12:56417126-56424789	0	-	56417126	56417126	8553170	13	660,102,226,119,69,847,118,86,146,202,83,98,28,	0,780,1007,3442,3686,3836,4772,4979,5720,6147,6498,6670,7635,
#Partially deleted in new
chr12	56418289	56421090	chr12:56418289-56421090	0	-	56418289	56418289	8553170	3	70,313,128,	0,2279,2673,
#Deleted in new
chr12	56421551	56422221	chr12:56421551-56422221	0	-	56421551	56421551	8553170	2	465,116,	0,554,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	56449501	56454651	chr12:56449501-56454651	3	-	56451279	56454613	789624	4	1964,81,165,398,	0,3570,4089,4752,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	56449699	56488170	chr12:56449699-56488170	3	-	56453739	56488118	8553170	4	1766,81,165,234,	0,3372,3891,38237,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	56451268	56469153	chr12:56451268-56469153	0	-	56451268	56451268	8553170	6	197,81,165,93,97,303,	0,1803,2322,4523,7209,17582,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	56451405	56469002	chr12:56451405-56469002	0	-	56451405	56451405	8553170	5	60,81,165,97,152,	0,1666,2185,7072,17445,
#Partially deleted in new
chr12	56452638	56469166	chr12:56452638-56469166	0	-	56452638	56452638	8553170	3	514,165,316,	0,952,16212,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	56468566	56479707	chr12:56468566-56479707	3	+	56468591	56469577	789624	2	110,10669,	0,472,
#Partially deleted in new
chr12	56470943	56480458	chr12:56470943-56480458	1	-	56474871	56480458	789624	16	700,64,77,62,93,132,177,51,59,33,59,164,80,130,122,171,	0,829,1175,1746,2284,2519,3600,3902,4680,5001,6716,6989,7239,8108,8836,9344,
#Partially deleted in new
chr12	56470943	56488414	chr12:56470943-56488414	1	-	56471486	56477701	789624	15	700,64,77,62,93,132,177,51,67,59,33,59,164,80,478,	0,829,1175,1746,2284,2519,3600,3902,4100,4680,5001,6716,6989,7239,16993,
#Partially deleted in new
chr12	56470943	56488414	chr12:56470943-56488414	1	-	56471486	56477701	789624	17	700,64,77,62,93,132,177,51,67,59,33,59,164,80,122,100,478,	0,829,1175,1746,2284,2519,3600,3902,4100,4680,5001,6716,6989,7239,8836,9344,16993,
#Partially deleted in new
chr12	56470951	56488397	chr12:56470951-56488397	3	-	56471486	56488118	0	18	692,64,77,62,93,132,177,51,67,59,33,59,164,80,130,122,100,461,	0,821,1167,1738,2276,2511,3592,3894,4092,4672,4993,6708,6981,7231,8100,8828,9336,16985,
#Deleted in new
chr12	56470951	56472472	chr12:56470951-56472472	0	-	56470951	56470951	8553170	2	692,700,	0,821,
#Partially deleted in new
chr12	56470951	56488129	chr12:56470951-56488129	0	-	56478046	56488118	789624	17	692,64,77,62,93,132,177,51,67,59,33,59,164,80,122,100,193,	0,821,1167,1738,2276,2511,3592,3894,4092,4672,4993,6708,6981,7231,8828,9336,16985,
#Partially deleted in new
chr12	56470951	56488152	chr12:56470951-56488152	0	-	56474885	56488118	789624	12	692,64,77,62,93,132,177,51,59,122,100,216,	0,821,1167,1738,2276,2511,3592,3894,4672,8828,9336,16985,
#Partially deleted in new
chr12	56470953	56488397	chr12:56470953-56488397	0	-	56475128	56488118	789624	18	690,64,77,62,93,132,177,51,140,59,33,59,164,80,130,122,100,461,	0,819,1165,1736,2274,2509,3590,3892,4090,4670,4991,6706,6979,7229,8098,8826,9334,16983,
#Partially deleted in new
chr12	56473564	56476993	chr12:56473564-56476993	0	-	56473564	56473564	8553170	7	30,177,51,67,59,33,74,	0,979,1281,1479,2059,2380,3355,
#Partially deleted in new
chr12	56474405	56477700	chr12:56474405-56477700	0	-	56474405	56474405	8553170	6	315,51,67,59,33,41,	0,440,638,1218,1539,3254,
#Partially deleted in new
chr12	56474690	56488249	chr12:56474690-56488249	0	-	56478046	56488118	0	11	30,51,140,354,59,164,80,96,122,100,313,	0,155,353,933,2969,3242,3492,4361,5089,5597,13246,
#Partially deleted in new
chr12	56474854	56488368	chr12:56474854-56488368	0	-	56478046	56488118	789624	8	42,67,59,33,59,164,80,432,	0,189,769,1090,2805,3078,3328,13082,
#Partially deleted in new
chr12	56475053	56488132	chr12:56475053-56488132	0	-	56475053	56488118	789624	6	57,59,33,122,100,196,	0,570,891,4726,5234,12883,
#Partially deleted in new
chr12	56475821	56488359	chr12:56475821-56488359	0	-	56475821	56475821	8553170	8	156,59,164,80,130,122,100,423,	0,1838,2111,2361,3230,3958,4466,12115,
#Partially deleted in new
chr12	56478194	56488414	chr12:56478194-56488414	0	-	56479894	56488118	789624	4	68,130,122,478,	0,857,1585,9742,
#Partially deleted in new
chr12	56479568	56488362	chr12:56479568-56488362	0	-	56479568	56479568	8553170	3	333,100,426,	0,719,8368,
#Partially deleted in new
chr12	56479592	56487599	chr12:56479592-56487599	0	-	56479592	56479592	8553170	3	309,100,105,	0,695,7902,
#Partially deleted in new
chr12	56511001	56512703	chr12:56511001-56512703	7	+	56511001	56511001	16724991	1	1702,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	56521928	56596196	chr12:56521928-56596196	3	+	56522023	56589012	0	14	161,167,59,92,158,80,110,47,94,78,111,81,87,7057,	0,40488,47046,47970,49769,59255,59470,59904,60130,64920,65625,66365,67003,67211,
#Partially deleted in new
chr12	56521957	56589503	chr12:56521957-56589503	1	+	56522023	56589012	789624	12	132,167,59,92,158,80,110,47,94,81,87,364,	0,40459,47017,47941,49740,59226,59441,59875,60101,66336,66974,67182,
#Partially deleted in new
chr12	56521989	56589652	chr12:56521989-56589652	0	+	56522023	56569920	789624	12	100,167,92,158,110,47,94,78,106,81,87,513,	0,40427,47909,49708,59409,59843,60069,64859,65564,66304,66942,67150,
#Partially deleted in new
chr12	56521994	56571716	chr12:56521994-56571716	0	+	56521994	56521994	8553170	6	95,99,167,59,92,19,	0,5870,40422,46980,47904,49703,
#Partially deleted in new
chr12	56521998	56589503	chr12:56521998-56589503	1	+	56569981	56589012	789624	13	91,59,92,158,80,110,47,94,78,111,81,87,364,	0,46976,47900,49699,59185,59400,59834,60060,64850,65555,66295,66933,67141,
#Partially deleted in new
chr12	56562413	56569920	chr12:56562413-56569920	1	+	56562413	56569920	789624	2	170,22,	0,7485,
#Partially deleted in new
chr12	56571697	56581655	chr12:56571697-56581655	0	+	56571697	56571697	8553170	3	158,80,257,	0,9486,9701,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	56588517	56588621	chr12:56588517-56588621	3	+	56588517	56588517	8553170	1	104,	0,
#Partially deleted in new
chr12	56595595	56636366	chr12:56595595-56636366	1	-	56598617	56636185	789624	30	3188,144,230,147,133,290,152,156,223,647,145,60,181,75,215,255,234,66,101,211,102,109,61,474,219,186,115,389,138,185,	0,3272,3533,4106,4368,4605,5085,5347,5584,5950,7117,7763,7924,8621,8989,9477,10234,10651,11037,14140,14518,14813,15977,16177,17419,18357,19418,19623,21799,40586,
#Partially deleted in new
chr12	56595929	56636379	chr12:56595929-56636379	3	-	56598617	56636185	0	29	2854,144,230,147,133,290,152,156,223,647,145,60,181,75,215,255,234,66,101,211,102,109,61,474,219,186,594,138,198,	0,2938,3199,3772,4034,4271,4751,5013,5250,5616,6783,7429,7590,8287,8655,9143,9900,10317,10703,13806,14184,14479,15643,15843,17085,18023,19084,21465,40252,
#Partially deleted in new
chr12	56598358	56603552	chr12:56598358-56603552	0	-	56598617	56603552	789624	13	425,144,230,147,133,290,152,144,223,647,145,60,33,	0,509,770,1343,1605,1842,2322,2584,2821,3187,4354,5000,5161,
#Partially deleted in new
chr12	56598368	56630211	chr12:56598368-56630211	1	-	56598617	56617530	789624	29	415,144,230,147,133,290,152,156,223,647,145,60,181,75,215,255,234,66,101,211,102,109,61,474,219,186,594,138,87,	0,499,760,1333,1595,1832,2312,2574,2811,3177,4344,4990,5151,5848,6216,6704,7461,7878,8264,11367,11745,12040,13204,13404,14646,15584,16645,19026,31756,
#Deleted in new
chr12	56600467	56601529	chr12:56600467-56601529	0	-	56600467	56600467	8553170	4	23,152,156,350,	0,213,475,712,
#Deleted in new
chr12	56600743	56601627	chr12:56600743-56601627	0	-	56600743	56601627	789624	4	89,156,157,82,	0,199,502,802,
#Partially deleted in new
chr12	56604239	56605867	chr12:56604239-56605867	0	-	56604239	56604239	8553170	3	52,743,38,	0,345,1590,
#Partially deleted in new
chr12	56605214	56609795	chr12:56605214-56609795	0	-	56605214	56605214	8553170	5	113,234,149,101,60,	0,615,1032,1418,4521,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	56605227	56606412	chr12:56605227-56606412	0	-	56605227	56605227	8553170	2	836,166,	0,1019,
#Partially deleted in new
chr12	56605991	56610479	chr12:56605991-56610479	0	-	56605991	56610479	789624	6	72,66,101,202,102,71,	0,255,641,3744,4122,4417,
#Partially deleted in new
chr12	56610116	56613098	chr12:56610116-56613098	0	-	56610132	56613098	789624	5	99,131,61,474,84,	0,292,1456,1656,2898,
#Deleted in new
chr12	56611294	56611854	chr12:56611294-56611854	0	-	56611294	56611294	8553170	2	339,82,	0,478,
#Partially deleted in new
chr12	56613017	56614306	chr12:56613017-56614306	0	-	56613017	56613017	8553170	2	216,354,	0,935,
#Partially deleted in new
chr12	56615308	56630308	chr12:56615308-56630308	0	-	56615308	56615308	8553170	2	299,184,	0,14816,
#Partially deleted in new
chr12	56615348	56630297	chr12:56615348-56630297	0	-	56615348	56617530	789624	3	259,138,325,	0,2046,14624,
#Partially deleted in new
chr12	56615395	56636318	chr12:56615395-56636318	0	-	56615395	56617530	789624	4	212,138,90,137,	0,1999,15380,20786,
#Partially deleted in new
chr12	56615520	56636816	chr12:56615520-56636816	0	-	56615520	56615520	8553170	5	87,138,90,112,88,	0,1874,15255,20661,21208,
#Partially deleted in new
chr12	56638174	56645279	chr12:56638174-56645279	0	-	56638174	56638174	8553170	3	249,91,109,	0,931,6996,
#Partially deleted in new
chr12	56638178	56646068	chr12:56638178-56646068	3	-	56638322	56645963	789624	10	245,202,213,123,159,185,122,175,183,232,	0,927,1801,4279,4494,5224,5658,6602,6992,7658,
#Partially deleted in new
chr12	56638279	56639418	chr12:56638279-56639418	0	-	56638279	56638279	8553170	2	144,313,	0,826,
#Partially deleted in new
chr12	56638375	56645984	chr12:56638375-56645984	0	-	56638375	56638375	8553170	5	48,202,171,136,148,	0,730,1604,6842,7461,
#Partially deleted in new
chr12	56639105	56643933	chr12:56639105-56643933	0	-	56639105	56639105	8553170	6	202,213,123,38,167,97,	0,874,3352,3567,4315,4731,
#Partially deleted in new
chr12	56639187	56645967	chr12:56639187-56645967	0	-	56639187	56645963	789624	6	120,123,185,122,175,131,	0,3270,4215,4649,5593,6649,
#Partially deleted in new
chr12	56639958	56643178	chr12:56639958-56643178	0	-	56639958	56639958	8553170	3	234,123,506,	0,2499,2714,
#Partially deleted in new
chr12	56639990	56645955	chr12:56639990-56645955	0	-	56639990	56645955	789624	7	202,123,159,185,122,175,119,	0,2467,2682,3412,3846,4790,5846,
#Partially deleted in new
chr12	56640099	56643573	chr12:56640099-56643573	0	-	56640099	56643573	789624	4	93,123,12,171,	0,2358,2573,3303,
#Partially deleted in new
chr12	56640159	56645967	chr12:56640159-56645967	0	-	56640159	56645963	789624	6	33,123,159,185,183,131,	0,2298,2513,3243,5011,5677,
#Partially deleted in new
chr12	56643419	56645928	chr12:56643419-56645928	0	-	56643419	56643419	8553170	5	168,67,172,183,92,	0,417,1364,1751,2417,
#Partially deleted in new
chr12	56645026	56645101	chr12:56645026-56645101	3	-	56645026	56645026	789624	1	75,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	56663340	56687997	chr12:56663340-56687997	0	-	56663340	56663340	789624	8	1158,25,635,90,99,70,114,748,	0,1435,2291,6934,8408,9399,9611,23909,
#Partially deleted in new
chr12	56663342	56688300	chr12:56663342-56688300	3	-	56664478	56687999	0	8	1156,25,63,90,99,70,114,303,	0,1433,2861,6932,8406,9397,9609,24655,
#Partially deleted in new
chr12	56663342	56688408	chr12:56663342-56688408	1	-	56664478	56686882	789624	9	1156,25,63,90,99,70,114,49,411,	0,1433,2861,6932,8406,9397,9609,23526,24655,
#Partially deleted in new
chr12	56663612	56688287	chr12:56663612-56688287	1	-	56664478	56687999	0	7	886,25,63,99,70,114,290,	0,1163,2591,8136,9127,9339,24385,
#Partially deleted in new
chr12	56664084	56688162	chr12:56664084-56688162	1	-	56664478	56687999	0	7	414,25,63,90,70,114,165,	0,691,2119,6190,8655,8867,23913,
#Partially deleted in new
chr12	56664166	56688284	chr12:56664166-56688284	1	-	56664478	56687999	0	7	332,25,90,99,70,114,287,	0,609,6108,7582,8573,8785,23831,
#Partially deleted in new
chr12	56664272	56688375	chr12:56664272-56688375	1	-	56664478	56687999	789624	7	226,25,63,90,61,114,378,	0,503,1931,6002,7476,8679,23725,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	56670449	56670746	chr12:56670449-56670746	3	-	56670449	56670449	8553170	1	297,	0,
#Partially deleted in new
chr12	56712427	56725542	chr12:56712427-56725542	1	-	56712537	56724521	789624	9	125,123,129,147,78,86,5589,72,280,	0,358,634,1109,1934,2174,3443,12024,12835,
#Partially deleted in new
chr12	56712427	56719600	chr12:56712427-56719600	0	-	56712537	56719600	789624	7	125,123,129,147,78,86,64,	0,358,634,1109,1934,2174,7109,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	56712432	56727197	chr12:56712432-56727197	3	-	56712537	56724521	0	8	120,123,129,147,78,86,72,1935,	0,353,629,1104,1929,2169,12019,12830,
#Partially deleted in new
chr12	56712432	56725299	chr12:56712432-56725299	1	-	56712537	56724521	789624	11	120,123,129,147,78,86,336,60,1734,72,37,	0,353,629,1104,1929,2169,3438,7104,7293,12019,12830,
#Partially deleted in new
chr12	56712434	56725267	chr12:56712434-56725267	1	-	56712537	56724521	0	8	118,123,129,147,78,86,72,306,	0,351,627,1102,1927,2167,12017,12527,
#Partially deleted in new
chr12	56712434	56725256	chr12:56712434-56725256	1	-	56712537	56724521	0	8	118,123,129,147,78,86,98,295,	0,351,627,1102,1927,2167,12017,12527,
#Partially deleted in new
chr12	56712439	56713582	chr12:56712439-56713582	0	-	56712439	56712439	8553170	3	469,129,46,	0,622,1097,
#Partially deleted in new
chr12	56712439	56725299	chr12:56712439-56725299	1	-	56712537	56713680	789624	8	113,123,129,147,78,102,98,37,	0,346,622,1097,1922,2162,12012,12823,
#Partially deleted in new
chr12	56712503	56725354	chr12:56712503-56725354	1	-	56712537	56724521	0	8	49,123,129,147,78,86,98,92,	0,282,558,1033,1858,2098,11948,12759,
#Partially deleted in new
chr12	56712535	56725298	chr12:56712535-56725298	0	-	56713553	56724521	789624	7	17,123,129,113,53,72,36,	0,250,526,1001,2099,11916,12727,
#Deleted in new
chr12	56712643	56713396	chr12:56712643-56713396	0	-	56712643	56712643	8553170	2	265,335,	0,418,
#Partially deleted in new
chr12	56712824	56724919	chr12:56712824-56724919	0	-	56712824	56724521	789624	7	84,129,147,78,86,72,94,	0,237,712,1537,1777,11627,12001,
#Partially deleted in new
chr12	56713063	56725304	chr12:56713063-56725304	0	-	56713063	56713063	8553170	6	127,53,69,86,72,42,	0,473,1307,1538,11388,12199,
#Partially deleted in new
chr12	56713115	56725036	chr12:56713115-56725036	0	-	56713115	56724521	789624	6	75,147,78,74,72,75,	0,421,1246,1486,11336,11846,
#Partially deleted in new
chr12	56713120	56725285	chr12:56713120-56725285	0	-	56713120	56713680	789624	6	70,147,78,102,72,23,	0,416,1241,1481,11331,12142,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	56713538	56731628	chr12:56713538-56731628	0	-	56713538	56724521	789624	6	145,78,86,72,191,139,	0,823,1063,10913,11724,17951,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	56713868	56725301	chr12:56713868-56725301	0	-	56713868	56713868	8553170	4	571,86,72,39,	0,733,10583,11394,
#Partially deleted in new
chr12	56714248	56725295	chr12:56714248-56725295	0	-	56714248	56714248	8553170	3	439,72,33,	0,10203,11014,
#Deleted in new
chr12	56714252	56714757	chr12:56714252-56714757	0	-	56714252	56714252	8553170	2	187,156,	0,349,
#Partially deleted in new
chr12	56714380	56725270	chr12:56714380-56725270	0	-	56714668	56724521	789624	4	59,102,72,309,	0,221,10071,10581,
#Partially deleted in new
chr12	56714611	56741535	chr12:56714611-56741535	3	-	56714611	56741535	8553170	7	76,72,78,99,92,70,101,	0,9840,10651,19535,23822,24682,26823,
#Deleted in new
chr12	56724504	56725516	chr12:56724504-56725516	0	-	56724504	56724521	8553170	2	45,254,	0,758,
#Partially deleted in new
chr12	56731595	56752373	chr12:56731595-56752373	0	-	56746067	56752298	789624	13	139,99,92,70,142,92,110,59,135,78,107,158,178,	0,2551,6838,7698,9839,10150,11391,12469,14449,15181,15330,19442,20600,
#Partially deleted in new
chr12	56731621	56752335	chr12:56731621-56752335	3	-	56731714	56752298	0	13	113,99,92,70,142,92,110,59,137,74,107,158,140,	0,2525,6812,7672,9813,10124,11365,12443,14423,15159,15304,19416,20574,
#Partially deleted in new
chr12	56738464	56743098	chr12:56738464-56743098	0	-	56738464	56743098	789624	5	61,70,142,71,112,	0,829,2970,3281,4522,
#Partially deleted in new
chr12	56741442	56752323	chr12:56741442-56752323	0	-	56741442	56752298	789624	9	134,92,110,59,137,74,107,158,137,	0,303,1544,2622,4602,5338,5483,9595,10744,
#Partially deleted in new
chr12	56743513	56752313	chr12:56743513-56752313	0	-	56743513	56743513	8553170	6	610,135,78,107,158,118,	0,2531,3263,3412,7524,8682,
#Partially deleted in new
chr12	56746032	56752269	chr12:56746032-56752269	0	-	56746032	56746032	8553170	3	149,158,74,	0,5005,6163,
#Partially deleted in new
chr12	56746145	56752339	chr12:56746145-56752339	0	-	56746145	56746145	8553170	4	36,252,158,144,	0,635,4892,6050,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	56746955	56751815	chr12:56746955-56751815	0	-	56746955	56746955	8553170	3	77,158,331,	0,4082,4529,
#Partially deleted in new
chr12	56752160	56787736	chr12:56752160-56787736	1	+	56773852	56787342	789624	5	158,332,259,164,612,	0,21673,29813,32692,34964,
#Partially deleted in new
chr12	56752160	56787736	chr12:56752160-56787736	3	+	56773852	56787342	789624	6	158,197,332,259,164,612,	0,11057,21673,29813,32692,34964,
#Partially deleted in new
chr12	56752448	56787790	chr12:56752448-56787790	1	+	56773852	56787342	789624	6	133,197,332,259,164,666,	0,10769,21385,29525,32404,34676,
#Partially deleted in new
chr12	56752452	56787576	chr12:56752452-56787576	1	+	56773852	56787342	789624	6	129,211,332,259,164,452,	0,10751,21381,29521,32400,34672,
#Partially deleted in new
chr12	56752452	56774078	chr12:56752452-56774078	0	+	56773852	56774078	789624	3	129,217,245,	0,10745,21381,
#Partially deleted in new
chr12	56752456	56770544	chr12:56752456-56770544	0	+	56752456	56752456	8553170	3	125,217,230,	0,10741,17858,
#Partially deleted in new
chr12	56752486	56774118	chr12:56752486-56774118	0	+	56773852	56774118	789624	3	95,217,280,	0,10711,21352,
#Partially deleted in new
chr12	56763323	56787790	chr12:56763323-56787790	1	+	56773852	56787342	789624	5	91,332,259,164,666,	0,10510,18650,21529,23801,
#Partially deleted in new
chr12	56784938	56787345	chr12:56784938-56787345	0	+	56784938	56784938	8553170	3	78,113,221,	0,963,2186,
#Partially deleted in new
chr12	56785928	56787345	chr12:56785928-56787345	0	+	56785928	56785928	8553170	2	86,221,	0,1196,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	56822984	56874268	chr12:56822984-56874268	7	+	56822984	56822984	16724991	2	720,3222,	0,48062,
#Deleted in new
chr12	56840972	56841273	chr12:56840972-56841273	7	-	56840972	56840972	16724991	1	301,	0,
#Deleted in new
chr12	56855693	56855886	chr12:56855693-56855886	7	+	56855693	56855693	16724991	1	193,	0,
#Deleted in new
chr12	56861374	56861508	chr12:56861374-56861508	3	+	56861374	56861374	8553170	1	134,	0,
#Partially deleted in new
chr12	56871709	56872367	chr12:56871709-56872367	5	+	56871709	56871709	16724991	1	658,	0,
#Partially deleted in new
chr12	56923153	56934405	chr12:56923153-56934405	3	-	56923832	56934261	789624	4	897,164,259,445,	0,6236,7072,10807,
#Partially deleted in new
chr12	56941173	56941482	chr12:56941173-56941482	7	-	56941173	56941173	16724991	1	309,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	56951430	56958319	chr12:56951430-56958319	3	-	56952028	56957462	789624	4	816,164,259,1170,	0,1396,3475,5719,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	56951437	56959374	chr12:56951437-56959374	0	-	56951437	56951437	8553170	3	809,164,2225,	0,1389,5712,
#Deleted in new
chr12	56981210	56985960	chr12:56981210-56985960	7	-	56981210	56981210	16724991	4	182,148,286,310,	0,792,2286,4440,
#Deleted in new
chr12	56994445	56998441	chr12:56994445-56998441	3	+	56995209	56996424	789624	2	203,3248,	0,748,
#Deleted in new
chr12	56996258	56998441	chr12:56996258-56998441	0	+	56996258	56996424	789624	2	208,251,	0,1932,
#Deleted in new
chr12	56996960	56997551	chr12:56996960-56997551	1	+	56996960	56997551	789624	1	591,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	56998833	57006446	chr12:56998833-57006446	3	-	57002778	57004917	789624	2	6128,42,	0,7571,
#Partially deleted in new
chr12	57009999	57016538	chr12:57009999-57016538	0	-	57012621	57015797	0	8	289,75,117,54,30,94,119,152,	0,2378,2621,2822,3359,3578,5684,6387,
#Partially deleted in new
chr12	57009999	57016541	chr12:57009999-57016541	1	-	57012378	57015797	0	7	289,75,54,30,94,119,155,	0,2378,2822,3359,3578,5684,6387,
#Partially deleted in new
chr12	57010009	57016520	chr12:57010009-57016520	0	-	57012378	57015797	0	9	279,177,158,75,54,30,94,119,134,	0,717,2124,2368,2812,3349,3568,5674,6377,
#Partially deleted in new
chr12	57010009	57016520	chr12:57010009-57016520	0	-	57012378	57015797	0	8	279,177,158,75,30,94,119,134,	0,717,2124,2368,3349,3568,5674,6377,
#Partially deleted in new
chr12	57010009	57016520	chr12:57010009-57016520	0	-	57012621	57015797	0	10	279,177,158,75,117,54,30,94,119,134,	0,717,2124,2368,2611,2812,3349,3568,5674,6377,
#Partially deleted in new
chr12	57010009	57016520	chr12:57010009-57016520	0	-	57012378	57015797	0	7	279,158,75,30,94,119,134,	0,2124,2368,3349,3568,5674,6377,
#Partially deleted in new
chr12	57010009	57016520	chr12:57010009-57016520	0	-	57012621	57015797	0	9	279,158,75,117,54,30,94,119,134,	0,2124,2368,2611,2812,3349,3568,5674,6377,
#Partially deleted in new
chr12	57010009	57016520	chr12:57010009-57016520	1	-	57012378	57015797	0	6	279,75,30,94,119,134,	0,2368,3349,3568,5674,6377,
#Partially deleted in new
chr12	57010009	57016520	chr12:57010009-57016520	1	-	57012378	57015797	0	9	279,177,158,75,54,30,94,119,134,	0,717,2124,2368,2812,3349,3568,5674,6377,
#Partially deleted in new
chr12	57012377	57028883	chr12:57012377-57028883	3	-	57012378	57015797	0	7	75,54,30,94,119,102,114,	0,444,981,1200,3306,4009,16392,
#Partially deleted in new
chr12	57013166	57016529	chr12:57013166-57016529	0	-	57013166	57013166	8553170	4	222,94,119,143,	0,411,2517,3220,
#Partially deleted in new
chr12	57028516	57050117	chr12:57028516-57050117	1	-	57028754	57048323	789624	28	365,128,153,133,107,135,75,69,150,94,201,227,201,63,105,66,87,119,148,104,99,64,47,105,95,116,134,231,	0,615,918,1223,1693,2523,7790,8255,8425,9031,9352,9895,10292,10695,12667,12915,14555,14723,15339,15589,18035,18346,18544,18786,19110,19472,19693,21370,
#Partially deleted in new
chr12	57028516	57050765	chr12:57028516-57050765	3	-	57028754	57048323	789624	29	365,128,153,133,107,135,75,69,150,94,201,227,201,63,105,66,87,119,148,104,99,64,47,105,95,116,134,220,48,	0,615,918,1223,1693,2523,7790,8255,8425,9031,9352,9895,10292,10695,12667,12915,14555,14723,15339,15589,18035,18346,18544,18786,19110,19472,19693,21370,22201,
#Partially deleted in new
chr12	57028617	57047830	chr12:57028617-57047830	0	-	57030245	57046917	789624	24	264,128,153,133,101,139,75,69,150,94,201,227,201,63,105,66,87,119,148,104,99,64,105,204,	0,514,817,1122,1592,2418,7689,8154,8324,8930,9251,9794,10191,10594,12566,12814,14454,14622,15238,15488,17934,18245,18685,19009,
#Partially deleted in new
chr12	57029365	57031086	chr12:57029365-57031086	0	-	57029365	57029365	8553170	4	222,133,107,47,	0,374,844,1674,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	57029962	57031087	chr12:57029962-57031087	0	-	57029962	57029962	8553170	2	354,48,	0,1077,
#Deleted in new
chr12	57038437	57039440	chr12:57038437-57039440	0	-	57038437	57038437	8553170	3	201,201,229,	0,371,774,
#Partially deleted in new
chr12	57041462	57050827	chr12:57041462-57050827	0	-	57041462	57043338	789624	5	35,87,119,220,105,	0,1609,1777,8424,9260,
#Partially deleted in new
chr12	57047662	57051175	chr12:57047662-57051175	0	-	57047662	57048323	789624	5	59,116,134,220,31,	0,326,547,2224,3482,
#Partially deleted in new
chr12	57047930	57051198	chr12:57047930-57051198	0	-	57047930	57047930	8553170	4	174,134,220,54,	0,279,1956,3214,
#Partially deleted in new
chr12	57055642	57078763	chr12:57055642-57078763	3	-	57059878	57078745	789624	8	4417,174,226,115,94,74,125,145,	0,5129,7476,8428,9003,15177,17145,22976,
#Partially deleted in new
chr12	57055647	57078769	chr12:57055647-57078769	1	-	57059878	57078745	789624	9	4412,174,226,115,94,73,220,125,151,	0,5124,7471,8423,8998,13586,15026,17140,22971,
#Partially deleted in new
chr12	57059589	57078763	chr12:57059589-57078763	0	-	57069299	57078745	789624	8	470,174,226,94,73,74,125,145,	0,1182,3529,5056,9644,11230,13198,19029,
#Partially deleted in new
chr12	57070673	57088063	chr12:57070673-57088063	0	-	57070673	57070673	8553170	3	220,125,113,	0,2114,17277,
#Partially deleted in new
chr12	57088893	57095476	chr12:57088893-57095476	3	+	57089271	57094721	789624	7	461,874,134,52,133,192,865,	0,2231,3554,4023,4169,4513,5718,
#Partially deleted in new
chr12	57089042	57091509	chr12:57089042-57091509	0	+	57089042	57089042	8553170	2	312,279,	0,2188,
#Partially deleted in new
chr12	57089093	57095475	chr12:57089093-57095475	1	+	57089271	57094721	789624	6	261,874,134,52,133,864,	0,2031,3354,3823,3969,5518,
#Partially deleted in new
chr12	57089146	57091816	chr12:57089146-57091816	0	+	57089146	57089146	8553170	2	208,583,	0,2087,
#Deleted in new
chr12	57092148	57093146	chr12:57092148-57093146	0	+	57092148	57092148	8553170	3	433,52,84,	0,768,914,
#Partially deleted in new
chr12	57095407	57111433	chr12:57095407-57111433	1	-	57096571	57108278	0	22	1354,129,66,93,111,64,147,137,95,207,93,123,88,189,132,149,53,139,84,139,137,305,	0,1442,1660,3097,3384,3607,3886,4359,4588,6882,7421,9056,9318,9743,10060,10783,11120,11285,11823,12197,12755,15721,
#Partially deleted in new
chr12	57095903	57102447	chr12:57095903-57102447	0	-	57095903	57095903	8553170	8	858,129,66,93,649,137,95,158,	0,946,1164,2601,2888,3863,4092,6386,
#Partially deleted in new
chr12	57096199	57111346	chr12:57096199-57111346	1	-	57096571	57107239	0	20	562,129,66,93,111,64,147,137,95,207,93,123,88,189,132,149,53,139,84,218,	0,650,868,2305,2592,2815,3094,3567,3796,6090,6629,8264,8526,8951,9268,9991,10328,10493,11031,14929,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	57096242	57097290	chr12:57096242-57097290	0	-	57096242	57096242	8553170	3	519,129,223,	0,607,825,
#Partially deleted in new
chr12	57096247	57110306	chr12:57096247-57110306	1	-	57096571	57108278	0	22	514,129,66,93,111,64,147,137,95,207,93,123,88,189,132,149,53,139,84,139,137,230,	0,602,820,2257,2544,2767,3046,3519,3748,6042,6581,8216,8478,8903,9220,9943,10280,10445,10983,11357,11915,13829,
#Partially deleted in new
chr12	57096340	57129100	chr12:57096340-57129100	3	-	57096571	57108278	0	22	421,129,66,93,111,64,147,137,95,207,93,123,88,189,132,149,53,139,84,139,137,128,	0,509,727,2164,2451,2674,2953,3426,3655,5949,6488,8123,8385,8810,9127,9850,10187,10352,10890,11264,11822,32632,
#Partially deleted in new
chr12	57096344	57111359	chr12:57096344-57111359	1	-	57096571	57107239	0	21	417,129,66,93,111,64,147,137,95,207,93,123,88,189,132,149,53,139,84,139,231,	0,505,723,2160,2447,2670,2949,3422,3651,5945,6484,8119,8381,8806,9123,9846,10183,10348,10886,11260,14784,
#Partially deleted in new
chr12	57096364	57111374	chr12:57096364-57111374	1	-	57096571	57108278	0	22	397,129,66,93,111,64,147,137,95,207,93,123,88,189,132,149,53,139,84,139,137,265,	0,485,703,2140,2427,2650,2929,3402,3631,5925,6464,8099,8361,8786,9103,9826,10163,10328,10866,11240,11798,14745,
#Partially deleted in new
chr12	57096445	57111353	chr12:57096445-57111353	0	-	57107313	57108278	789624	21	316,129,66,93,111,64,147,137,95,207,93,123,88,189,132,149,53,139,84,137,225,	0,404,622,2059,2346,2569,2848,3321,3550,5844,6383,8018,8280,8705,9022,9745,10082,10247,10785,11717,14683,
#Partially deleted in new
chr12	57097104	57099794	chr12:57097104-57099794	0	-	57097104	57099794	789624	6	29,86,111,64,147,28,	0,1400,1687,1910,2189,2662,
#Deleted in new
chr12	57098744	57099104	chr12:57098744-57099104	0	-	57098744	57098744	8553170	2	158,90,	0,270,
#Partially deleted in new
chr12	57098819	57108278	chr12:57098819-57108278	1	-	57098819	57108278	789624	18	12,70,64,147,137,95,207,93,123,88,189,132,149,53,139,84,139,116,	0,13,195,474,947,1176,3470,4009,5644,5906,6331,6648,7371,7708,7873,8411,8785,9343,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	57099418	57102990	chr12:57099418-57102990	0	-	57099418	57102831	789624	5	22,137,95,207,162,	0,348,577,2871,3410,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	57099797	57105252	chr12:57099797-57105252	0	-	57099797	57105252	789624	8	106,95,54,207,93,123,88,102,	0,198,1048,2492,3031,4666,4928,5353,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	57103272	57105317	chr12:57103272-57105317	0	-	57103272	57103272	8553170	3	1314,88,167,	0,1453,1878,
#Deleted in new
chr12	57104467	57108283	chr12:57104467-57108283	0	-	57104467	57104467	8553170	9	119,88,189,872,53,139,84,139,121,	0,258,683,1000,2060,2225,2763,3137,3695,
#Partially deleted in new
chr12	57106692	57110543	chr12:57106692-57110543	0	-	57106692	57108278	789624	5	139,84,139,137,162,	0,538,912,1470,3689,
#Partially deleted in new
chr12	57106692	57111231	chr12:57106692-57111231	0	-	57106692	57108278	789624	5	139,84,85,137,103,	0,538,966,1470,4436,
#Partially deleted in new
chr12	57106707	57132139	chr12:57106707-57132139	0	-	57106707	57108278	789624	5	124,84,139,137,119,	0,523,897,1455,25313,
#Partially deleted in new
chr12	57106736	57111192	chr12:57106736-57111192	0	-	57106736	57108278	789624	6	95,84,139,137,34,64,	0,494,868,1426,3340,4392,
#Partially deleted in new
chr12	57106749	57110289	chr12:57106749-57110289	0	-	57107313	57108278	789624	4	82,84,137,213,	0,481,1413,3327,
#Partially deleted in new
chr12	57107255	57110306	chr12:57107255-57110306	0	-	57107255	57108278	789624	4	59,139,137,230,	0,349,907,2821,
#Partially deleted in new
chr12	57107260	57111374	chr12:57107260-57111374	0	-	57107260	57108278	789624	5	54,139,137,68,246,	0,344,902,2782,3868,
#Partially deleted in new
chr12	57107636	57110340	chr12:57107636-57110340	0	-	57107636	57108278	789624	3	107,137,400,	0,526,2304,
#Partially deleted in new
chr12	57107665	57111413	chr12:57107665-57111413	0	-	57107665	57108278	789624	4	78,137,170,285,	0,497,2275,3463,
#Partially deleted in new
chr12	57128492	57150059	chr12:57128492-57150059	1	+	57128964	57149729	789624	7	539,123,138,120,129,264,380,	0,9966,12881,15186,16479,16734,21187,
#Partially deleted in new
chr12	57128498	57213351	chr12:57128498-57213351	3	+	57128964	57212555	0	89	533,123,138,120,129,264,163,223,190,144,237,181,223,202,126,141,126,117,81,168,183,201,246,198,205,165,245,132,228,175,95,150,141,135,132,135,130,127,152,125,378,190,205,193,126,129,120,114,150,123,117,129,123,141,191,184,86,120,188,206,189,149,94,117,120,123,126,117,107,133,120,123,141,135,120,269,179,107,117,177,141,174,162,175,102,65,91,145,937,	0,9960,12875,15180,16473,16728,25709,25980,27595,28278,29903,31326,32394,33818,34359,37306,37585,38431,38945,40641,44669,45281,46961,47410,48542,48928,49860,50391,50830,51283,51548,51831,52168,52658,54880,55276,55586,55827,56340,56582,57032,58768,62306,62821,64346,64677,65067,65400,65855,66078,66486,66772,67159,67364,67588,68483,68800,69046,69657,69966,70713,71378,71943,72200,72535,72998,73281,73922,74682,74890,75911,76128,76610,76852,77059,77974,79539,80212,80584,81193,81530,81808,82219,82677,82988,83251,83428,83618,83916,
#Partially deleted in new
chr12	57128715	57150059	chr12:57128715-57150059	1	+	57128964	57149018	0	7	316,123,138,120,129,264,1079,	0,9743,12658,14963,16256,16511,20265,
#Partially deleted in new
chr12	57128908	57155593	chr12:57128908-57155593	1	+	57128964	57154794	789624	8	123,123,138,120,129,264,163,1115,	0,9550,12465,14770,16063,16318,25299,25570,
#Deleted in new
chr12	57144619	57147619	chr12:57144619-57147619	3	-	57144619	57144619	789624	2	464,181,	0,2819,
#Deleted in new
chr12	57146489	57147529	chr12:57146489-57147529	1	-	57146489	57146489	789624	2	234,91,	0,949,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	57164427	57166412	chr12:57164427-57166412	0	+	57164427	57164427	8553170	2	1518,329,	0,1656,
#Deleted in new
chr12	57167444	57169300	chr12:57167444-57169300	0	+	57167444	57167444	8553170	3	80,51,161,	0,740,1695,
#Deleted in new
chr12	57187368	57192969	chr12:57187368-57192969	0	+	57187368	57192969	789624	3	88,205,125,	0,3436,5476,
#Deleted in new
chr12	57194503	57194576	chr12:57194503-57194576	3	+	57194503	57194503	5263520	1	73,	0,
#Deleted in new
chr12	57200273	57201153	chr12:57200273-57201153	0	+	57200273	57200273	8553170	3	262,117,120,	0,425,760,
#Deleted in new
chr12	57201107	57203276	chr12:57201107-57203276	0	+	57201107	57203276	789624	5	46,123,168,117,96,	0,389,672,1313,2073,
#Deleted in new
chr12	57202819	57203531	chr12:57202819-57203531	0	+	57202819	57202819	8553170	2	468,143,	0,569,
#Deleted in new
chr12	57203242	57205785	chr12:57203242-57205785	0	+	57203242	57203242	8553170	6	45,133,120,623,135,228,	0,146,1167,1384,2108,2315,
#Partially deleted in new
chr12	57203617	57213340	chr12:57203617-57213340	0	+	57203617	57203617	8553170	17	912,623,135,120,269,780,117,177,141,174,162,175,102,65,91,145,926,	0,1009,1733,1940,2855,4420,5465,6074,6411,6689,7100,7558,7869,8132,8309,8499,8797,
#Partially deleted in new
chr12	57216794	57226449	chr12:57216794-57226449	3	+	57216969	57225747	789624	2	232,1572,	0,8083,
#Partially deleted in new
chr12	57216828	57226448	chr12:57216828-57226448	0	+	57216969	57221360	789624	3	198,238,1571,	0,4478,8049,
#Partially deleted in new
chr12	57219868	57225419	chr12:57219868-57225419	0	+	57219868	57219868	8553170	2	108,542,	0,5009,
#Deleted in new
chr12	57229326	57234931	chr12:57229326-57234931	3	+	57229778	57234361	0	12	485,198,80,201,82,123,140,166,100,156,108,698,	0,1476,2154,2386,2884,3126,3377,3853,4236,4422,4676,4907,
#Deleted in new
chr12	57229497	57230198	chr12:57229497-57230198	3	-	57229497	57229497	8553170	1	701,	0,
#Deleted in new
chr12	57229572	57234935	chr12:57229572-57234935	0	+	57229778	57231742	789624	11	239,198,201,82,123,140,166,100,156,108,702,	0,1230,2140,2638,2880,3131,3607,3990,4176,4430,4661,
#Deleted in new
chr12	57229660	57231913	chr12:57229660-57231913	0	+	57229660	57229660	8553170	4	151,164,53,201,	0,1142,1847,2052,
#Deleted in new
chr12	57229683	57232572	chr12:57229683-57232572	0	+	57229683	57229683	8553170	6	128,198,80,201,82,148,	0,1119,1797,2029,2527,2741,
#Deleted in new
chr12	57229710	57231979	chr12:57229710-57231979	0	+	57229710	57229710	8553170	3	101,198,267,	0,1092,2002,
#Deleted in new
chr12	57229710	57234726	chr12:57229710-57234726	0	+	57229710	57229710	8553170	6	101,1111,365,959,156,724,	0,1092,2500,2993,4038,4292,
#Deleted in new
chr12	57229710	57234726	chr12:57229710-57234726	1	+	57229778	57234361	0	12	101,198,80,201,82,93,140,166,100,156,108,493,	0,1092,1770,2002,2500,2772,2993,3469,3852,4038,4292,4523,
#Deleted in new
chr12	57229714	57231769	chr12:57229714-57231769	0	+	57229714	57229714	8553170	3	97,198,289,	0,1088,1766,
#Deleted in new
chr12	57229722	57233811	chr12:57229722-57233811	0	+	57231884	57233811	789624	8	89,201,82,123,140,166,100,63,	0,1990,2488,2730,2981,3457,3840,4026,
#Deleted in new
chr12	57229723	57232822	chr12:57229723-57232822	0	+	57229778	57232822	789624	6	88,198,80,201,82,119,	0,1079,1757,1989,2487,2980,
#Deleted in new
chr12	57229739	57232773	chr12:57229739-57232773	0	+	57231884	57232472	789624	5	72,201,82,151,70,	0,1973,2471,2685,2964,
#Deleted in new
chr12	57229748	57233239	chr12:57229748-57233239	0	+	57229778	57231742	789624	7	63,198,201,82,151,140,60,	0,1054,1964,2462,2676,2955,3431,
#Deleted in new
chr12	57229758	57234726	chr12:57229758-57234726	0	+	57229778	57231917	789624	12	53,198,80,205,82,123,140,166,100,156,108,493,	0,1044,1722,1954,2452,2694,2945,3421,3804,3990,4244,4475,
#Deleted in new
chr12	57230085	57234726	chr12:57230085-57234726	1	+	57230832	57234361	0	12	159,198,80,201,82,123,140,166,100,156,108,493,	0,717,1395,1627,2125,2367,2618,3094,3477,3663,3917,4148,
#Deleted in new
chr12	57230102	57234476	chr12:57230102-57234476	0	+	57230832	57231742	789624	11	142,198,201,82,123,140,166,100,156,108,243,	0,700,1610,2108,2350,2601,3077,3460,3646,3900,4131,
#Deleted in new
chr12	57230114	57231890	chr12:57230114-57231890	0	+	57230832	57231890	789624	4	86,198,80,178,	0,688,1366,1598,
#Deleted in new
chr12	57230166	57231906	chr12:57230166-57231906	0	+	57230832	57231906	789624	4	90,198,80,194,	0,636,1314,1546,
#Deleted in new
chr12	57230166	57232241	chr12:57230166-57232241	0	+	57230832	57232241	789624	5	69,198,80,201,31,	0,636,1314,1546,2044,
#Deleted in new
chr12	57230170	57231185	chr12:57230170-57231185	0	+	57230170	57230170	8553170	2	74,383,	0,632,
#Deleted in new
chr12	57230274	57232534	chr12:57230274-57232534	0	+	57230274	57230274	8553170	6	146,198,80,201,82,110,	0,528,1206,1438,1936,2150,
#Deleted in new
chr12	57230279	57232238	chr12:57230279-57232238	0	+	57230832	57232238	789624	5	62,198,80,201,28,	0,523,1201,1433,1931,
#Deleted in new
chr12	57230327	57234551	chr12:57230327-57234551	1	+	57230832	57234361	0	12	93,198,80,201,82,123,140,166,100,156,108,318,	0,475,1153,1385,1883,2125,2376,2852,3235,3421,3675,3906,
#Deleted in new
chr12	57230353	57231913	chr12:57230353-57231913	0	+	57230832	57231913	789624	4	121,198,80,201,	0,449,1127,1359,
#Deleted in new
chr12	57230359	57234699	chr12:57230359-57234699	1	+	57230832	57234361	0	12	301,198,80,201,82,123,140,166,100,156,108,466,	0,443,1121,1353,1851,2093,2344,2820,3203,3389,3643,3874,
#Deleted in new
chr12	57230359	57232568	chr12:57230359-57232568	0	+	57230832	57232568	789624	6	103,198,80,201,82,116,	0,443,1121,1353,1851,2093,
#Deleted in new
chr12	57230359	57234935	chr12:57230359-57234935	0	+	57230832	57231742	789624	11	307,198,201,82,151,140,166,100,156,108,702,	0,443,1353,1851,2065,2344,2820,3203,3389,3643,3874,
#Deleted in new
chr12	57230367	57234763	chr12:57230367-57234763	0	+	57230832	57231742	789624	11	53,198,201,82,151,140,166,100,156,108,530,	0,435,1345,1843,2057,2336,2812,3195,3381,3635,3866,
#Deleted in new
chr12	57230383	57234726	chr12:57230383-57234726	0	+	57230832	57232472	789624	12	277,198,80,201,82,151,140,166,100,156,108,493,	0,419,1097,1329,1827,2041,2320,2796,3179,3365,3619,3850,
#Deleted in new
chr12	57230393	57232801	chr12:57230393-57232801	0	+	57230832	57232472	789624	7	69,198,80,201,82,151,98,	0,409,1087,1319,1817,2031,2310,
#Deleted in new
chr12	57230700	57232261	chr12:57230700-57232261	0	+	57230700	57230700	8553170	3	300,201,51,	0,1012,1510,
#Deleted in new
chr12	57230702	57231906	chr12:57230702-57231906	0	+	57230832	57231906	789624	3	298,80,194,	0,778,1010,
#Deleted in new
chr12	57231161	57232399	chr12:57231161-57232399	0	+	57231161	57231161	8553170	2	752,189,	0,1049,
#Deleted in new
chr12	57231447	57232487	chr12:57231447-57232487	0	+	57231447	57231447	8553170	3	466,82,63,	0,763,977,
#Deleted in new
chr12	57232460	57234694	chr12:57232460-57234694	0	+	57232460	57234118	789624	6	115,140,166,100,156,692,	0,243,719,1102,1288,1542,
#Deleted in new
chr12	57233633	57234244	chr12:57233633-57234244	0	+	57233633	57233633	8553170	2	29,496,	0,115,
#Deleted in new
chr12	57234902	57237338	chr12:57234902-57237338	1	-	57235562	57237085	789624	4	717,61,89,310,	0,846,1690,2126,
#Deleted in new
chr12	57234904	57240692	chr12:57234904-57240692	3	-	57235562	57237085	789624	5	715,61,89,307,14,	0,844,1688,2124,5774,
#Deleted in new
chr12	57234910	57237100	chr12:57234910-57237100	0	-	57234910	57234910	8553170	4	709,61,358,72,	0,838,1413,2118,
#Deleted in new
chr12	57235079	57237092	chr12:57235079-57237092	1	-	57235673	57237085	789624	3	730,89,64,	0,1513,1949,
#Deleted in new
chr12	57236188	57237085	chr12:57236188-57237085	0	-	57236188	57236188	8553170	2	493,57,	0,840,
#Deleted in new
chr12	57237255	57240703	chr12:57237255-57240703	0	-	57237255	57237255	8553170	3	80,109,25,	0,549,3423,
#Deleted in new
chr12	57239545	57240715	chr12:57239545-57240715	0	-	57239545	57239545	8553170	2	950,37,	0,1133,
#Partially deleted in new
chr12	57243452	57251193	chr12:57243452-57251193	3	-	57243811	57249636	0	12	458,138,52,86,50,67,98,73,98,268,67,201,	0,635,862,1084,1463,1692,3351,4673,5253,5588,6118,7540,
#Partially deleted in new
chr12	57243452	57251184	chr12:57243452-57251184	1	-	57243811	57249257	0	11	458,138,52,86,50,67,98,73,98,268,192,	0,635,862,1084,1463,1692,3351,4673,5253,5588,7540,
#Partially deleted in new
chr12	57243458	57251186	chr12:57243458-57251186	0	-	57244143	57246848	789624	8	452,138,52,86,50,98,73,194,	0,629,856,1078,1457,3345,4667,7534,
#Partially deleted in new
chr12	57243653	57251185	chr12:57243653-57251185	1	-	57243811	57246848	0	9	257,138,52,86,50,67,98,73,193,	0,434,661,883,1262,1491,3150,4472,7339,
#Partially deleted in new
chr12	57244756	57248364	chr12:57244756-57248364	0	-	57244756	57244756	8553170	4	209,67,98,239,	0,388,2047,3369,
#Partially deleted in new
chr12	57248125	57251188	chr12:57248125-57251188	0	-	57248125	57249636	789624	5	73,98,268,160,196,	0,580,915,1445,2867,
#Partially deleted in new
chr12	57249018	57251186	chr12:57249018-57251186	0	-	57249018	57249018	8553170	3	290,67,194,	0,552,1974,
#Partially deleted in new
chr12	57249608	57296484	chr12:57249608-57296484	3	-	57284044	57296484	789624	15	29,201,85,98,148,170,101,155,161,127,243,173,233,109,74,	0,1384,6381,6805,8381,9281,17122,18694,19313,19714,20143,30749,34215,45790,46802,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	57253761	57297033	chr12:57253761-57297033	0	-	57253761	57253761	8553170	14	1352,85,98,148,170,101,155,161,127,243,173,233,109,623,	0,2228,2652,4228,5128,12969,14541,15160,15561,15990,26596,30062,41637,42649,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr12	57253763	57431005	chr12:57253763-57431005	1	-	57254772	57310428	0	24	1350,85,98,148,170,101,155,161,127,243,173,233,54,32,109,141,60,79,127,87,42,200,70,286,	0,2226,2650,4226,5126,12967,14539,15158,15559,15988,26594,30060,35093,35245,41635,42647,43564,44326,45588,46331,49412,56500,141985,176956,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr12	57253764	57310463	chr12:57253764-57310463	1	-	57254772	57310428	0	22	1349,85,98,148,170,101,155,161,127,243,173,233,54,32,109,141,60,79,127,87,42,200,	0,2225,2649,4225,5125,12966,14538,15157,15558,15987,26593,30059,35092,35244,41634,42646,43563,44325,45587,46330,49411,56499,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr12	57253764	57431005	chr12:57253764-57431005	3	-	57254772	57310428	789624	24	1349,85,98,148,170,101,155,161,127,243,173,233,32,96,109,141,60,79,127,87,42,200,70,286,	0,2225,2649,4225,5125,12966,14538,15157,15558,15987,26593,30059,35244,38807,41634,42646,43563,44325,45587,46330,49411,56499,141984,176955,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr12	57253764	57310463	chr12:57253764-57310463	1	-	57254772	57283935	0	23	1349,85,98,148,170,101,155,161,127,243,102,173,233,54,32,109,141,60,79,127,87,42,200,	0,2225,2649,4225,5125,12966,14538,15157,15558,15987,18688,26593,30059,35092,35244,41634,42646,43563,44325,45587,46330,49411,56499,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr12	57253775	57430808	chr12:57253775-57430808	1	-	57254772	57310428	789624	24	1338,85,98,148,170,101,155,161,127,243,173,233,32,109,141,60,79,127,87,42,24,200,70,89,	0,2214,2638,4214,5114,12955,14527,15146,15547,15976,26582,30048,35233,41623,42635,43552,44314,45576,46319,49400,51864,56488,141973,176944,
#Partially deleted in new
chr12	57254732	57295479	chr12:57254732-57295479	0	-	57254772	57295479	789624	15	381,85,98,148,170,101,155,161,127,243,173,233,32,78,81,	0,1257,1681,3257,4157,11998,13570,14189,14590,15019,25625,29091,34276,37839,40666,
#Partially deleted in new
chr12	57254755	57341482	chr12:57254755-57341482	1	-	57254772	57310428	789624	24	358,85,98,148,170,101,155,161,127,243,102,173,233,54,32,109,141,60,79,127,87,42,197,265,	0,1234,1658,3234,4134,11975,13547,14166,14567,14996,17697,25602,29068,34101,34253,40643,41655,42572,43334,44596,45339,48420,55508,86462,
#Partially deleted in new
chr12	57256013	57268457	chr12:57256013-57268457	0	-	57256013	57256013	8553170	6	130,98,148,170,101,155,	0,400,1976,2876,10717,12289,
#Partially deleted in new
chr12	57256489	57268577	chr12:57256489-57268577	0	-	57256489	57256489	8553170	6	22,148,170,188,281,14,	0,1500,2400,10241,11687,12074,
#Partially deleted in new
chr12	57280429	57299436	chr12:57280429-57299436	0	-	57280429	57299436	789624	8	101,233,32,109,141,60,79,85,	0,3394,8579,14969,15981,16898,17660,18922,
#Partially deleted in new
chr12	57280460	57295594	chr12:57280460-57295594	0	-	57280460	57280460	8553170	4	70,233,96,196,	0,3363,12111,14938,
#Partially deleted in new
chr12	57297762	57303180	chr12:57297762-57303180	0	-	57297762	57297762	8553170	5	132,79,127,87,5,	0,327,1589,2332,5413,
#Partially deleted in new
chr12	57298003	57310451	chr12:57298003-57310451	0	-	57298003	57298003	8553170	5	165,127,87,42,188,	0,1348,2091,5172,12260,
#Partially deleted in new
chr12	57310339	57430790	chr12:57310339-57430790	0	-	57310339	57310428	789624	2	124,71,	0,120380,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	57415295	57415403	chr12:57415295-57415403	3	+	57415295	57415295	8553170	1	108,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	57431115	57433935	chr12:57431115-57433935	3	+	57431115	57431115	8553170	2	315,233,	0,2587,
#Partially deleted in new
chr12	57434759	57450828	chr12:57434759-57450828	3	+	57434886	57450022	789624	2	440,1552,	0,14517,
#Partially deleted in new
chr12	57452322	57459280	chr12:57452322-57459280	0	+	57452322	57452322	8553170	3	217,942,69,	0,3771,6889,
#Deleted in new
chr12	57454702	57456782	chr12:57454702-57456782	0	+	57454936	57456782	789624	3	276,91,689,	0,1041,1391,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	57455320	57458008	chr12:57455320-57458008	3	+	57455536	57456848	789624	2	514,1915,	0,773,
#Deleted in new
chr12	57455971	57456638	chr12:57455971-57456638	0	+	57455971	57455971	8553170	2	24,545,	0,122,
#Partially deleted in new
chr12	57460134	57466387	chr12:57460134-57466387	0	+	57464863	57466387	789624	6	67,196,145,90,138,148,	0,4538,4976,5472,5653,6105,
#Partially deleted in new
chr12	57460134	57472260	chr12:57460134-57472260	1	+	57464863	57472061	0	10	67,196,145,90,138,150,165,231,268,1944,	0,4538,4976,5472,5653,6105,7198,7859,9296,10182,
#Partially deleted in new
chr12	57460137	57472262	chr12:57460137-57472262	3	+	57463691	57472061	0	12	64,127,93,196,145,90,138,150,165,231,268,1946,	0,3527,3861,4535,4973,5469,5650,6102,7195,7856,9293,10179,
#Partially deleted in new
chr12	57460150	57472260	chr12:57460150-57472260	1	+	57463691	57472061	0	11	51,127,166,145,90,138,150,165,231,268,1944,	0,3514,4552,4960,5456,5637,6089,7182,7843,9280,10166,
#Partially deleted in new
chr12	57460490	57464867	chr12:57460490-57464867	0	+	57463691	57464867	789624	4	65,127,93,195,	0,3174,3508,4182,
#Partially deleted in new
chr12	57460512	57464943	chr12:57460512-57464943	0	+	57460512	57460512	8553170	2	43,271,	0,4160,
#Partially deleted in new
chr12	57463691	57472059	chr12:57463691-57472059	0	+	57463691	57472059	0	10	100,166,145,90,138,150,165,231,268,1743,	0,1011,1419,1915,2096,2548,3641,4302,5739,6625,
#Deleted in new
chr12	57465374	57466141	chr12:57465374-57466141	0	+	57465374	57465374	8553170	2	322,354,	0,413,
#Partially deleted in new
chr12	57472254	57479850	chr12:57472254-57479850	3	-	57472516	57479406	789624	18	434,106,135,54,78,99,108,133,99,96,91,62,93,114,222,218,334,121,	0,1348,1787,2168,2371,2620,3036,3228,3578,3816,4109,4335,4616,4901,5204,6285,6836,7475,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr12	57472263	57488814	chr12:57472263-57488814	1	-	57472516	57488621	789624	21	425,106,135,54,78,99,108,133,156,96,91,62,93,114,222,218,334,59,57,69,203,	0,1339,1778,2159,2362,2611,3027,3219,3512,3807,4100,4326,4607,4892,5195,6276,6827,7466,8514,11631,16348,
#Partially deleted in new
chr12	57472263	57479632	chr12:57472263-57479632	1	-	57472683	57479406	789624	16	425,135,54,78,99,108,133,99,96,91,62,93,114,222,218,542,	0,1778,2159,2362,2611,3027,3219,3569,3807,4100,4326,4607,4892,5195,6276,6827,
#Partially deleted in new
chr12	57472263	57476641	chr12:57472263-57476641	0	-	57472263	57472263	8553170	11	425,106,135,54,78,99,108,133,99,384,52,	0,1339,1778,2159,2362,2611,3027,3219,3569,3807,4326,
#Partially deleted in new
chr12	57472264	57474934	chr12:57472264-57474934	0	-	57472516	57474934	789624	5	424,106,54,78,60,	0,1338,2158,2361,2610,
#Partially deleted in new
chr12	57472265	57477851	chr12:57472265-57477851	0	-	57472265	57472265	8553170	15	423,106,135,54,78,99,108,133,156,96,91,374,114,222,67,	0,1337,1776,2157,2360,2609,3025,3217,3510,3805,4098,4324,4890,5193,5519,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr12	57472265	57488726	chr12:57472265-57488726	1	-	57473635	57483997	789624	21	423,89,135,54,78,99,108,133,99,96,91,62,93,114,222,218,334,59,57,139,115,	0,1337,1776,2157,2360,2609,3025,3217,3567,3805,4098,4324,4605,4890,5193,6274,6825,7464,8512,11629,16346,
#Partially deleted in new
chr12	57472269	57478198	chr12:57472269-57478198	1	-	57472516	57477662	789624	16	419,106,135,54,78,99,108,133,99,96,91,62,93,114,222,414,	0,1333,1772,2153,2356,2605,3021,3213,3563,3801,4094,4320,4601,4886,5189,5515,
#Partially deleted in new
chr12	57472476	57475411	chr12:57472476-57475411	0	-	57472476	57472476	8553170	7	212,106,135,54,78,99,121,	0,1126,1565,1946,2149,2398,2814,
#Partially deleted in new
chr12	57472675	57475363	chr12:57472675-57475363	0	-	57472675	57475363	789624	6	13,106,135,78,99,73,	0,927,1366,1950,2199,2615,
#Deleted in new
chr12	57474268	57475140	chr12:57474268-57475140	0	-	57474268	57474268	8553170	3	208,78,266,	0,357,606,
#Partially deleted in new
chr12	57475444	57487473	chr12:57475444-57487473	0	+	57475444	57475444	8553170	3	198,207,88,	0,1795,11941,
#Deleted in new
chr12	57475484	57478059	chr12:57475484-57478059	0	-	57475484	57477662	789624	9	131,99,96,91,62,93,114,222,59,	0,348,586,879,1105,1386,1671,1974,2516,
#Deleted in new
chr12	57476077	57478337	chr12:57476077-57478337	0	-	57476077	57476077	8553170	6	89,91,374,114,222,60,	0,286,512,1078,1381,2200,
#Deleted in new
chr12	57476135	57477856	chr12:57476135-57477856	0	-	57476135	57476135	8553170	6	24,91,62,114,222,72,	0,228,454,1020,1323,1649,
#Deleted in new
chr12	57476157	57476337	chr12:57476157-57476337	0	-	57476157	57476157	8553170	2	28,77,	0,103,
#Deleted in new
chr12	57476376	57477873	chr12:57476376-57477873	0	-	57476376	57477662	789624	5	78,62,114,222,89,	0,213,779,1082,1408,
#Deleted in new
chr12	57476729	57479846	chr12:57476729-57479846	0	-	57476729	57476729	8553170	5	540,222,218,334,117,	0,729,1810,2361,3000,
#Deleted in new
chr12	57476830	57478036	chr12:57476830-57478036	0	-	57476830	57476830	8553170	4	133,114,222,36,	0,325,628,1170,
#Deleted in new
chr12	57476870	57477784	chr12:57476870-57477784	0	-	57476870	57477773	789624	3	93,114,326,	0,285,588,
#Deleted in new
chr12	57476887	57478610	chr12:57476887-57478610	0	-	57476887	57477662	789624	4	76,114,222,212,	0,268,571,1511,
#Deleted in new
chr12	57476933	57477816	chr12:57476933-57477816	0	-	57476933	57476933	8553170	3	30,525,32,	0,222,851,
#Deleted in new
chr12	57477213	57477867	chr12:57477213-57477867	0	-	57477213	57477213	8553170	2	463,83,	0,571,
#Deleted in new
chr12	57477479	57478150	chr12:57477479-57478150	0	-	57477479	57477662	789624	2	197,366,	0,305,
#Deleted in new
chr12	57477542	57479866	chr12:57477542-57479866	0	-	57477542	57479160	789624	4	138,218,75,137,	0,997,1548,2187,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr12	57487293	57517569	chr12:57487293-57517569	0	+	57488090	57512308	0	23	532,263,91,79,135,76,173,107,117,204,202,75,171,96,51,214,132,105,187,72,93,130,287,	0,643,1725,1973,2130,2602,2913,3244,10863,11126,13027,16931,24404,24714,25009,25457,27426,27660,27856,28626,28951,29141,29989,
#Partially deleted in new
chr12	57487956	57516649	chr12:57487956-57516649	3	+	57488090	57516581	0	21	243,91,79,135,76,173,107,117,204,202,75,171,96,118,214,132,105,187,72,93,215,	0,1062,1310,1467,1939,2250,2581,10200,10463,12364,16268,23741,24051,24279,24794,26763,26997,27193,27963,28288,28478,
#Partially deleted in new
chr12	57488023	57498241	chr12:57488023-57498241	0	+	57488023	57488023	8553170	7	79,91,79,135,173,107,85,	0,995,1243,1400,2183,2514,10133,
#Partially deleted in new
chr12	57488055	57490342	chr12:57488055-57490342	0	+	57488055	57488055	8553170	5	144,91,292,76,136,	0,963,1211,1840,2151,
#Deleted in new
chr12	57488061	57489519	chr12:57488061-57489519	0	+	57488061	57488061	8553170	3	138,327,96,	0,957,1362,
#Partially deleted in new
chr12	57488065	57516655	chr12:57488065-57516655	0	+	57488090	57490215	789624	19	134,91,79,135,173,107,117,204,202,75,171,96,118,214,132,105,187,418,221,	0,953,1201,1358,2141,2472,10091,10354,12255,16159,23632,23942,24170,24685,26654,26888,27084,27854,28369,
#Partially deleted in new
chr12	57488067	57512154	chr12:57488067-57512154	0	+	57488067	57488067	8553170	9	132,173,107,117,204,202,75,171,147,	0,2139,2470,10089,10352,12253,16157,23630,23940,
#Deleted in new
chr12	57488067	57489457	chr12:57488067-57489457	0	+	57488067	57488067	8553170	2	132,439,	0,951,
#Partially deleted in new
chr12	57488067	57490234	chr12:57488067-57490234	0	+	57488090	57489508	789624	6	132,91,79,104,76,28,	0,951,1199,1387,1828,2139,
#Deleted in new
chr12	57488067	57489610	chr12:57488067-57489610	0	+	57488067	57488067	8553170	3	132,91,344,	0,951,1199,
#Partially deleted in new
chr12	57488067	57498185	chr12:57488067-57498185	0	+	57488090	57490351	789624	5	132,91,173,107,29,	0,951,2139,2470,10089,
#Partially deleted in new
chr12	57488067	57490621	chr12:57488067-57490621	0	+	57488090	57490215	789624	5	132,91,79,173,84,	0,951,1199,2139,2470,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	57488067	57489783	chr12:57488067-57489783	0	+	57488067	57488067	8553170	4	132,91,79,360,	0,951,1199,1356,
#Partially deleted in new
chr12	57488067	57490033	chr12:57488067-57490033	0	+	57488067	57488067	8553170	5	132,91,79,135,138,	0,951,1199,1356,1828,
#Partially deleted in new
chr12	57488067	57516649	chr12:57488067-57516649	1	+	57488090	57490215	789624	19	132,91,79,173,107,117,204,202,75,171,96,118,214,132,105,187,72,93,215,	0,951,1199,2139,2470,10089,10352,12253,16157,23630,23940,24168,24683,26652,26886,27082,27852,28177,28367,
#Partially deleted in new
chr12	57488084	57500423	chr12:57488084-57500423	0	+	57488090	57490351	789624	6	115,102,107,117,204,103,	0,2193,2453,10072,10335,12236,
#Partially deleted in new
chr12	57488084	57490358	chr12:57488084-57490358	0	+	57488090	57489911	789624	4	115,91,76,152,	0,934,1811,2122,
#Partially deleted in new
chr12	57488090	57489911	chr12:57488090-57489911	1	+	57488090	57489911	789624	3	109,91,16,	0,928,1805,
#Partially deleted in new
chr12	57488090	57490351	chr12:57488090-57490351	1	+	57488090	57490351	789624	2	109,74,	0,2187,
#Deleted in new
chr12	57488211	57489283	chr12:57488211-57489283	0	+	57488211	57488211	8553170	3	450,91,17,	0,807,1055,
#Partially deleted in new
chr12	57488685	57490216	chr12:57488685-57490216	0	+	57488685	57488685	8553170	5	424,79,135,76,10,	0,581,738,1210,1521,
#Partially deleted in new
chr12	57489529	57500430	chr12:57489529-57500430	0	+	57489529	57500430	789624	6	29,76,173,107,204,110,	0,366,677,1008,8890,10791,
#Partially deleted in new
chr12	57500113	57504280	chr12:57500113-57504280	0	+	57500113	57500113	8553170	2	409,56,	0,4111,
#Partially deleted in new
chr12	57500357	57516655	chr12:57500357-57516655	0	+	57500357	57516538	789624	2	133,161,	0,16137,
#Partially deleted in new
chr12	57503985	57511785	chr12:57503985-57511785	0	+	57503985	57503985	8553170	2	314,88,	0,7712,
#Partially deleted in new
chr12	57511585	57512964	chr12:57511585-57512964	0	+	57511585	57511585	8553170	4	283,96,118,214,	0,422,650,1165,
#Partially deleted in new
chr12	57511768	57512464	chr12:57511768-57512464	0	+	57511768	57511768	8553170	2	100,457,	0,239,
#Partially deleted in new
chr12	57511796	57514842	chr12:57511796-57514842	0	+	57511796	57511796	8553170	4	72,346,214,123,	0,211,954,2923,
#Partially deleted in new
chr12	57512490	57515234	chr12:57512490-57515234	0	+	57512490	57512490	8553170	4	474,132,105,85,	0,2229,2463,2659,
#Partially deleted in new
chr12	57512687	57512750	chr12:57512687-57512750	3	+	57512687	57512687	5263520	1	63,	0,
#Partially deleted in new
chr12	57512929	57516655	chr12:57512929-57516655	0	+	57512929	57516581	789624	7	35,132,61,120,72,93,221,	0,1790,2024,2287,2990,3315,3505,
#Deleted in new
chr12	57514821	57515493	chr12:57514821-57515493	0	+	57514821	57514821	8553170	3	30,105,344,	0,132,328,
#Deleted in new
chr12	57515149	57516655	chr12:57515149-57516655	0	+	57515149	57516343	789624	3	187,72,411,	0,770,1095,
#Deleted in new
chr12	57515180	57516648	chr12:57515180-57516648	0	+	57515180	57516156	789624	5	156,72,20,93,214,	0,739,958,1064,1254,
#Deleted in new
chr12	57515182	57516647	chr12:57515182-57516647	0	+	57515182	57516138	789624	4	154,239,93,213,	0,737,1062,1252,
#Partially deleted in new
chr12	57516587	57520492	chr12:57516587-57520492	1	-	57516808	57517406	789624	4	593,156,48,75,	0,681,1118,3830,
#Partially deleted in new
chr12	57516587	57521737	chr12:57516587-57521737	3	-	57516808	57517406	789624	4	593,170,48,129,	0,681,1118,5021,
#Partially deleted in new
chr12	57516588	57520517	chr12:57516588-57520517	1	-	57516808	57517475	789624	4	592,327,48,100,	0,680,1117,3829,
#Partially deleted in new
chr12	57516592	57520517	chr12:57516592-57520517	1	-	57516808	57517406	789624	4	588,170,48,100,	0,676,1113,3825,
#Partially deleted in new
chr12	57516808	57520511	chr12:57516808-57520511	1	-	57516808	57517475	789624	3	372,485,94,	0,460,3609,
#Partially deleted in new
chr12	57516952	57520511	chr12:57516952-57520511	0	-	57516952	57517475	789624	4	228,274,48,94,	0,316,753,3465,
#Partially deleted in new
chr12	57517711	57520480	chr12:57517711-57520480	3	-	57517711	57520480	789624	2	42,63,	0,2706,
#Deleted in new
chr12	57519162	57519259	chr12:57519162-57519259	3	-	57519162	57519162	5263520	1	97,	0,
#Partially deleted in new
chr12	57520709	57525414	chr12:57520709-57525414	0	+	57524303	57525414	789624	6	34,64,137,103,163,67,	0,3319,3570,4010,4243,4638,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	57520964	57524765	chr12:57520964-57524765	0	+	57524303	57524765	789624	4	285,64,137,46,	0,3064,3315,3755,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	57521047	57524764	chr12:57521047-57524764	0	+	57521047	57521047	8553170	4	202,64,137,135,	0,2981,3232,3582,
#Deleted in new
chr12	57521679	57524956	chr12:57521679-57524956	0	+	57524303	57524956	789624	5	288,64,137,103,4,	0,2349,2600,3040,3273,
#Deleted in new
chr12	57522743	57530148	chr12:57522743-57530148	3	+	57524303	57529234	789624	13	268,64,137,103,163,1041,662,154,170,414,53,64,989,	0,1285,1536,1976,2209,2604,3822,4763,5104,5403,5922,6202,6416,
#Deleted in new
chr12	57522839	57524766	chr12:57522839-57524766	0	+	57524303	57524766	789624	3	172,388,47,	0,1189,1880,
#Deleted in new
chr12	57522841	57525455	chr12:57522841-57525455	0	+	57525024	57525455	789624	4	170,103,163,108,	0,1878,2111,2506,
#Deleted in new
chr12	57523062	57524742	chr12:57523062-57524742	0	+	57524303	57524742	789624	4	285,64,137,23,	0,966,1217,1657,
#Deleted in new
chr12	57524028	57525091	chr12:57524028-57525091	0	+	57524303	57524660	789624	4	64,137,193,139,	0,251,601,924,
#Deleted in new
chr12	57524318	57526653	chr12:57524318-57526653	0	+	57524318	57526653	789624	5	98,103,163,78,88,	0,401,634,1992,2247,
#Deleted in new
chr12	57526642	57530143	chr12:57526642-57530143	0	+	57526642	57529234	789624	9	585,154,170,414,53,64,170,64,210,	0,864,1205,1504,2023,2303,2517,2968,3291,
#Deleted in new
chr12	57527501	57528190	chr12:57527501-57528190	0	+	57527501	57527501	8553170	2	516,47,	0,642,
#Deleted in new
chr12	57527911	57528712	chr12:57527911-57528712	0	+	57527911	57528712	789624	3	106,417,47,	0,232,754,
#Deleted in new
chr12	57529001	57530146	chr12:57529001-57530146	0	+	57529001	57529234	789624	3	8,166,213,	0,158,932,
#Partially deleted in new
chr12	57530101	57547331	chr12:57530101-57547331	1	-	57530688	57547063	789624	14	674,92,103,72,78,39,66,145,161,99,62,97,69,304,	0,1913,2111,2470,2631,2882,3136,3851,4190,4954,5382,5647,15926,16926,
#Partially deleted in new
chr12	57530310	57547141	chr12:57530310-57547141	3	-	57530688	57547063	789624	16	465,92,103,72,78,39,66,145,161,99,62,97,6,9,69,114,	0,1704,1902,2261,2422,2673,2927,3642,3981,4745,5173,5438,8208,11053,15717,16717,
#Partially deleted in new
chr12	57530353	57547152	chr12:57530353-57547152	0	-	57532082	57547063	789624	13	422,92,72,78,39,66,145,161,99,62,97,69,125,	0,1661,2218,2379,2630,2884,3599,3938,4702,5130,5395,15674,16674,
#Partially deleted in new
chr12	57530616	57547120	chr12:57530616-57547120	0	-	57538323	57547063	789624	16	159,92,103,72,78,39,66,145,161,99,62,97,95,9,69,93,	0,1398,1596,1955,2116,2367,2621,3336,3675,4439,4867,5132,7636,10747,15411,16411,
#Partially deleted in new
chr12	57530678	57535070	chr12:57530678-57535070	0	-	57530688	57535070	789624	10	97,92,103,72,27,39,66,145,161,15,	0,1336,1534,1893,2105,2305,2559,3274,3613,4377,
#Partially deleted in new
chr12	57530688	57547172	chr12:57530688-57547172	1	-	57530688	57547063	789624	15	87,92,103,72,78,39,66,145,161,99,62,97,6,69,145,	0,1326,1524,1883,2044,2295,2549,3264,3603,4367,4795,5060,7830,15339,16339,
#Partially deleted in new
chr12	57532266	57533972	chr12:57532266-57533972	0	-	57532266	57532266	8553170	4	377,78,320,20,	0,466,717,1686,
#Partially deleted in new
chr12	57532589	57535139	chr12:57532589-57535139	0	-	57532589	57532589	8553170	6	54,78,320,145,161,84,	0,143,394,1363,1702,2466,
#Partially deleted in new
chr12	57532634	57535845	chr12:57532634-57535845	0	-	57532634	57535845	789624	6	9,78,39,99,62,97,	0,98,349,2421,2849,3114,
#Partially deleted in new
chr12	57532792	57547121	chr12:57532792-57547121	0	-	57532792	57547063	789624	11	18,39,66,145,161,99,62,97,42,69,94,	0,191,445,1160,1499,2263,2691,2956,5690,13235,14235,
#Partially deleted in new
chr12	57532794	57534402	chr12:57532794-57534402	0	-	57532794	57532794	8553170	4	16,39,66,450,	0,189,443,1158,
#Partially deleted in new
chr12	57532977	57534530	chr12:57532977-57534530	0	-	57532977	57532977	8553170	2	326,239,	0,1314,
#Partially deleted in new
chr12	57532993	57547185	chr12:57532993-57547185	0	-	57532993	57547063	789624	7	29,66,99,62,97,69,158,	0,244,2062,2490,2755,13034,14034,
#Partially deleted in new
chr12	57533952	57535845	chr12:57533952-57535845	0	-	57533952	57533952	8553170	4	145,161,99,97,	0,339,1103,1796,
#Partially deleted in new
chr12	57534008	57538552	chr12:57534008-57538552	0	-	57534008	57534008	8553170	6	89,161,99,62,97,34,	0,283,1047,1475,1740,4510,
#Partially deleted in new
chr12	57534340	57547224	chr12:57534340-57547224	0	-	57534340	57547063	789624	5	112,99,62,97,197,	0,715,1143,1408,12687,
#Partially deleted in new
chr12	57534345	57535845	chr12:57534345-57535845	0	-	57534345	57534345	8553170	4	47,99,62,97,	0,710,1138,1403,
#Partially deleted in new
chr12	57534381	57535546	chr12:57534381-57535546	0	-	57534381	57534381	8553170	2	71,491,	0,674,
#Partially deleted in new
chr12	57534977	57547188	chr12:57534977-57547188	0	-	57534977	57534977	8553170	5	177,62,97,69,161,	0,506,771,11050,12050,
#Partially deleted in new
chr12	57535059	57538566	chr12:57535059-57538566	0	-	57535059	57535059	8553170	4	95,62,97,314,	0,424,689,3193,
#Deleted in new
chr12	57535483	57536083	chr12:57535483-57536083	0	-	57535483	57535483	8553170	2	62,335,	0,265,
#Partially deleted in new
chr12	57535494	57547206	chr12:57535494-57547206	0	-	57535494	57535494	8553170	3	351,69,179,	0,10533,11533,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	57542946	57547193	chr12:57542946-57547193	0	-	57542946	57542946	8553170	3	236,69,166,	0,3081,4081,
#Deleted in new
chr12	57546027	57547174	chr12:57546027-57547174	0	-	57546027	57546027	8553170	2	64,147,	0,1000,
#Partially deleted in new
chr12	57549997	57586632	chr12:57549997-57586632	3	+	57550271	57583179	0	29	403,88,74,105,49,56,88,125,105,149,149,176,69,207,147,189,118,65,110,102,61,72,105,217,154,83,28,115,2415,	0,13441,13622,14110,14462,14920,17128,17496,18965,19258,19537,19989,21323,22063,22582,25086,25642,26089,26271,26763,27715,28011,28240,30958,31417,31872,32604,33103,34220,
#Partially deleted in new
chr12	57550043	57584648	chr12:57550043-57584648	1	+	57550271	57583179	789624	26	357,49,56,88,125,105,149,149,176,69,207,147,189,118,65,110,102,61,72,105,217,154,83,28,115,431,	0,14416,14874,17082,17450,18919,19212,19491,19943,21277,22017,22536,25040,25596,26043,26225,26717,27669,27965,28194,30912,31371,31826,32558,33057,34174,
#Partially deleted in new
chr12	57581677	57582874	chr12:57581677-57582874	0	+	57581677	57581677	8553170	2	275,273,	0,924,
#Partially deleted in new
chr12	57591173	57601926	chr12:57591173-57601926	1	+	57591289	57601606	0	9	290,98,97,147,39,114,268,104,401,	0,2851,3952,7891,8226,9150,9637,10071,10352,
#Partially deleted in new
chr12	57591202	57603418	chr12:57591202-57603418	3	+	57591289	57601606	0	11	261,98,97,144,147,39,114,268,104,111,1493,	0,2822,3923,4685,7862,8197,9121,9608,10042,10323,10723,
#Partially deleted in new
chr12	57591221	57599094	chr12:57591221-57599094	0	+	57591289	57599094	789624	5	179,98,97,144,30,	0,2803,3904,4666,7843,
#Partially deleted in new
chr12	57591242	57601879	chr12:57591242-57601879	1	+	57591289	57601606	0	10	221,75,66,144,147,39,114,268,104,354,	0,2782,3914,4645,7822,8157,9081,9568,10002,10283,
#Partially deleted in new
chr12	57591245	57599144	chr12:57591245-57599144	0	+	57591289	57594032	789624	5	189,98,97,144,80,	0,2779,3880,4642,7819,
#Partially deleted in new
chr12	57591265	57600436	chr12:57591265-57600436	0	+	57591289	57597960	789624	8	198,98,97,144,105,147,39,113,	0,2759,3860,4622,6692,7799,8134,9058,
#Partially deleted in new
chr12	57591273	57603248	chr12:57591273-57603248	1	+	57591289	57601606	0	10	190,98,97,144,147,39,114,268,104,1723,	0,2751,3852,4614,7791,8126,9050,9537,9971,10252,
#Partially deleted in new
chr12	57599089	57600977	chr12:57599089-57600977	0	+	57599089	57600977	789624	3	122,114,167,	0,1234,1721,
#Deleted in new
chr12	57604621	57609800	chr12:57604621-57609800	3	+	57606517	57609152	789624	6	237,63,76,749,218,724,	0,1568,1821,2243,3898,4455,
#Deleted in new
chr12	57604622	57606511	chr12:57604622-57606511	0	+	57606489	57606511	789624	3	236,264,69,	0,1366,1820,
#Deleted in new
chr12	57604622	57607009	chr12:57604622-57607009	0	+	57606517	57607009	789624	5	236,41,63,76,145,	0,1366,1567,1820,2242,
#Deleted in new
chr12	57604638	57607467	chr12:57604638-57607467	0	+	57606489	57607467	789624	5	220,388,63,76,584,	0,705,1551,1804,2245,
#Deleted in new
chr12	57604820	57609800	chr12:57604820-57609800	1	+	57606517	57609152	789624	7	38,161,63,76,749,218,724,	0,750,1369,1622,2044,3699,4256,
#Deleted in new
chr12	57604823	57609803	chr12:57604823-57609803	1	+	57606517	57609152	789624	5	1429,76,749,218,727,	0,1619,2041,3696,4253,
#Deleted in new
chr12	57604833	57609804	chr12:57604833-57609804	1	+	57606489	57609152	789624	6	25,63,76,730,218,728,	0,1356,1609,2050,3686,4243,
#Deleted in new
chr12	57605006	57607466	chr12:57605006-57607466	0	+	57606884	57607466	789624	2	1246,1024,	0,1436,
#Deleted in new
chr12	57607499	57609196	chr12:57607499-57609196	0	+	57607499	57608924	789624	2	114,677,	0,1020,
#Deleted in new
chr12	57610179	57617243	chr12:57610179-57617243	3	+	57610216	57616894	0	16	136,115,215,96,77,67,104,70,90,93,51,78,201,181,212,460,	0,390,2750,3084,3260,3514,3836,4151,4336,4509,4787,5057,5332,5657,6104,6604,
#Deleted in new
chr12	57611434	57617243	chr12:57611434-57617243	1	+	57611894	57616894	0	15	557,215,96,77,67,104,70,90,93,51,78,201,181,212,460,	0,1495,1829,2005,2259,2581,2896,3081,3254,3532,3802,4077,4402,4849,5349,
#Deleted in new
chr12	57611912	57617242	chr12:57611912-57617242	1	+	57613269	57616894	0	16	79,141,104,96,77,67,104,70,90,93,51,78,201,181,212,459,	0,843,1128,1351,1527,1781,2103,2418,2603,2776,3054,3324,3599,3924,4371,4871,
#Partially deleted in new
chr12	57612117	57618065	chr12:57612117-57618065	3	-	57612117	57612117	8553170	3	1592,458,305,	0,3108,5643,
#Partially deleted in new
chr12	57612338	57618171	chr12:57612338-57618171	0	-	57612338	57612338	8553170	3	1371,427,411,	0,2887,5422,
#Deleted in new
chr12	57613993	57617217	chr12:57613993-57617217	0	+	57613993	57613993	8553170	7	788,51,78,201,181,212,434,	0,973,1243,1518,1843,2290,2790,
#Deleted in new
chr12	57614436	57616014	chr12:57614436-57616014	0	+	57614436	57614436	8553170	6	169,93,51,78,201,76,	0,252,530,800,1075,1502,
#Deleted in new
chr12	57614492	57615893	chr12:57614492-57615893	0	+	57614492	57614492	8553170	6	113,93,51,78,201,57,	0,196,474,744,1019,1344,
#Deleted in new
chr12	57614572	57615031	chr12:57614572-57615031	0	+	57614572	57614572	8553170	2	209,65,	0,394,
#Partially deleted in new
chr12	57615227	57619638	chr12:57615227-57619638	0	-	57615227	57615227	8553170	2	425,73,	0,4338,
#Deleted in new
chr12	57615491	57616305	chr12:57615491-57616305	0	-	57615491	57615491	8553170	2	161,66,	0,748,
#Partially deleted in new
chr12	57616382	57619379	chr12:57616382-57619379	0	+	57616382	57616382	8553170	3	113,505,69,	0,401,2928,
#Partially deleted in new
chr12	57619526	57626140	chr12:57619526-57626140	0	+	57619535	57624730	789624	18	352,111,158,165,153,83,148,114,78,96,107,70,117,34,83,55,106,143,	0,815,1408,1736,2163,3032,3260,3497,4309,4476,4973,5197,5339,5596,5709,5883,6055,6471,
#Deleted in new
chr12	57619535	57620418	chr12:57619535-57620418	0	+	57619535	57620418	789624	2	343,77,	0,806,
#Partially deleted in new
chr12	57619909	57626131	chr12:57619909-57626131	3	+	57620220	57625745	789624	14	543,158,165,153,83,148,114,78,96,117,34,95,55,550,	0,1025,1353,1780,2649,2877,3114,3926,4093,4956,5213,5326,5500,5672,
#Partially deleted in new
chr12	57620348	57626150	chr12:57620348-57626150	0	+	57620348	57624896	789624	16	104,158,165,153,83,148,114,78,96,107,117,34,83,55,171,153,	0,586,914,1341,2210,2438,2675,3487,3654,4151,4517,4774,4887,5061,5233,5649,
#Deleted in new
chr12	57620902	57621697	chr12:57620902-57621697	0	+	57620902	57620902	8553170	2	151,435,	0,360,
#Deleted in new
chr12	57621046	57622771	chr12:57621046-57622771	0	+	57621046	57621046	8553170	4	46,165,153,213,	0,216,643,1512,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	57623409	57633151	chr12:57623409-57633151	0	-	57623409	57623409	8553170	10	3552,645,191,99,181,41,107,165,219,380,	0,4208,5303,5638,6742,7068,7570,7790,8505,9362,
#Deleted in new
chr12	57623685	57626151	chr12:57623685-57626151	0	+	57623685	57623685	8553170	6	1297,34,83,55,171,154,	0,1437,1550,1724,1896,2312,
#Deleted in new
chr12	57624265	57625549	chr12:57624265-57625549	0	+	57624265	57624265	8553170	5	341,117,34,83,140,	0,600,857,970,1144,
#Deleted in new
chr12	57624513	57626150	chr12:57624513-57626150	0	+	57624513	57624513	8553170	7	93,117,34,83,55,128,153,	0,352,609,722,896,1111,1484,
#Deleted in new
chr12	57624895	57626151	chr12:57624895-57626151	0	+	57624895	57624895	8553170	5	87,34,55,171,154,	0,227,514,686,1102,
#Partially deleted in new
chr12	57625894	57633355	chr12:57625894-57633355	3	-	57626743	57632132	789624	11	1067,241,141,191,99,181,41,107,165,219,584,	0,1723,2227,2818,3153,4257,4583,5085,5305,6020,6877,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	57626171	57629365	chr12:57626171-57629365	0	-	57626171	57626171	8553170	2	790,1748,	0,1446,
#Partially deleted in new
chr12	57626427	57632647	chr12:57626427-57632647	1	-	57626743	57632132	789624	10	534,241,141,191,99,181,41,107,219,107,	0,1190,1694,2285,2620,3724,4050,4552,5487,6113,
#Partially deleted in new
chr12	57626475	57632655	chr12:57626475-57632655	0	-	57629121	57632132	789624	10	486,241,141,191,99,181,107,165,219,115,	0,1142,1646,2237,2572,3676,4504,4724,5439,6065,
#Partially deleted in new
chr12	57626940	57628729	chr12:57626940-57628729	0	-	57626940	57628729	789624	4	21,274,141,17,	0,677,1181,1772,
#Partially deleted in new
chr12	57628166	57631087	chr12:57628166-57631087	0	-	57629121	57631087	789624	6	231,191,127,181,41,108,	0,546,881,1985,2311,2813,
#Partially deleted in new
chr12	57628451	57633239	chr12:57628451-57633239	1	-	57628700	57632132	789624	7	452,181,41,107,165,219,468,	0,1700,2026,2528,2748,3463,4320,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	57629328	57633202	chr12:57629328-57633202	1	-	57629876	57632132	789624	6	1004,41,107,165,219,431,	0,1149,1651,1871,2586,3443,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	57629343	57632668	chr12:57629343-57632668	1	-	57629876	57632132	789624	6	989,41,107,165,219,128,	0,1134,1636,1856,2571,3197,
#Deleted in new
chr12	57630151	57632668	chr12:57630151-57632668	0	-	57630151	57632132	789624	6	181,41,107,165,219,128,	0,326,828,1048,1763,2389,
#Deleted in new
chr12	57630506	57632649	chr12:57630506-57632649	0	-	57631068	57632132	789624	5	12,107,55,219,109,	0,473,693,1408,2034,
#Deleted in new
chr12	57630996	57632943	chr12:57630996-57632943	0	-	57631252	57632132	789624	5	90,55,26,219,172,	0,203,342,918,1775,
#Deleted in new
chr12	57631127	57632680	chr12:57631127-57632680	0	-	57631127	57631127	8553170	2	237,766,	0,787,
#Deleted in new
chr12	57631156	57632679	chr12:57631156-57632679	0	-	57631156	57631156	8553170	4	98,26,219,139,	0,182,758,1384,
#Deleted in new
chr12	57631221	57633205	chr12:57631221-57633205	0	-	57631221	57632132	789624	4	143,219,41,434,	0,693,1319,1550,
#Deleted in new
chr12	57674664	57675250	chr12:57674664-57675250	7	+	57674664	57674664	16724991	1	586,	0,
#Partially deleted in new
chr12	57693954	57720998	chr12:57693954-57720998	1	+	57694161	57720909	0	14	369,177,64,77,99,211,102,101,52,89,276,190,113,215,	0,795,1825,2007,2320,21805,22137,22457,22738,23915,24191,25038,26451,26829,
#Deleted in new
chr12	57694022	57695148	chr12:57694022-57695148	0	+	57694022	57694022	8553170	2	301,399,	0,727,
#Partially deleted in new
chr12	57694120	57721555	chr12:57694120-57721555	3	+	57694161	57720909	0	15	203,177,64,77,99,211,102,101,52,89,276,190,165,113,772,	0,629,1659,1841,2154,21639,21971,22291,22572,23749,24025,24872,25978,26285,26663,
#Partially deleted in new
chr12	57694131	57721510	chr12:57694131-57721510	3	-	57694131	57694131	8553170	2	165,534,	0,26845,
#Deleted in new
chr12	57694131	57696278	chr12:57694131-57696278	0	+	57694161	57694771	789624	5	192,221,64,77,4,	0,574,1648,1830,2143,
#Partially deleted in new
chr12	57694136	57719061	chr12:57694136-57719061	0	+	57694161	57719061	789624	5	187,177,64,86,69,	0,613,1643,24199,24856,
#Partially deleted in new
chr12	57694138	57716181	chr12:57694138-57716181	0	+	57694161	57696297	789624	6	185,177,64,15,99,422,	0,611,1641,1823,2136,21621,
#Partially deleted in new
chr12	57694142	57721219	chr12:57694142-57721219	1	+	57694161	57720909	0	13	181,64,77,99,211,102,101,52,89,231,190,113,436,	0,1637,1819,2132,21617,21949,22269,22550,23727,24003,24850,26263,26641,
#Deleted in new
chr12	57694142	57696078	chr12:57694142-57696078	0	+	57694161	57694771	789624	4	181,221,64,117,	0,563,1637,1819,
#Partially deleted in new
chr12	57694144	57721555	chr12:57694144-57721555	1	+	57694161	57720909	0	14	179,177,64,77,99,211,105,101,52,89,276,190,113,772,	0,605,1635,1817,2130,21615,21944,22267,22548,23725,24001,24848,26261,26639,
#Partially deleted in new
chr12	57694144	57721024	chr12:57694144-57721024	1	+	57694161	57720909	0	15	179,177,64,77,99,211,102,101,52,89,231,190,165,113,241,	0,605,1635,1817,2130,21615,21947,22267,22548,23725,24001,24848,25954,26261,26639,
#Partially deleted in new
chr12	57694144	57721331	chr12:57694144-57721331	1	+	57694161	57720909	789624	9	179,177,64,24,89,276,190,113,548,	0,605,1635,22576,23725,24001,24848,26261,26639,
#Partially deleted in new
chr12	57694144	57721555	chr12:57694144-57721555	1	+	57694161	57720909	0	13	179,177,64,20,211,102,101,52,89,276,190,113,772,	0,605,1635,1817,21615,21947,22267,22548,23725,24001,24848,26261,26639,
#Partially deleted in new
chr12	57694144	57721395	chr12:57694144-57721395	1	+	57694161	57720909	0	13	179,177,64,77,211,105,101,52,89,276,190,113,612,	0,605,1635,1817,21615,21944,22267,22548,23725,24001,24848,26261,26639,
#Partially deleted in new
chr12	57694145	57715847	chr12:57694145-57715847	0	+	57694161	57715847	789624	4	178,177,60,88,	0,604,2168,21614,
#Partially deleted in new
chr12	57694146	57721557	chr12:57694146-57721557	1	+	57694161	57720909	0	14	177,177,64,77,99,211,102,101,52,89,231,190,113,774,	0,603,1633,1815,2128,21613,21945,22265,22546,23723,23999,24846,26259,26637,
#Partially deleted in new
chr12	57694146	57715951	chr12:57694146-57715951	0	+	57694146	57694146	8553170	5	177,177,64,412,192,	0,603,1633,1815,21613,
#Deleted in new
chr12	57694153	57695996	chr12:57694153-57695996	0	+	57694153	57694153	8553170	3	170,177,217,	0,596,1626,
#Deleted in new
chr12	57694159	57696030	chr12:57694159-57696030	0	+	57694161	57695581	789624	5	164,177,135,64,69,	0,590,1383,1620,1802,
#Partially deleted in new
chr12	57695495	57721557	chr12:57695495-57721557	0	+	57695495	57695495	8553170	10	348,412,434,101,52,89,276,1271,113,774,	0,466,20264,20916,21197,22374,22650,23497,24910,25288,
#Partially deleted in new
chr12	57715705	57718168	chr12:57715705-57718168	0	+	57715705	57715705	8553170	6	265,105,101,52,89,23,	0,383,706,987,2164,2440,
#Partially deleted in new
chr12	57715976	57718052	chr12:57715976-57718052	0	+	57715976	57715976	8553170	4	217,101,52,183,	0,435,716,1893,
#Partially deleted in new
chr12	57716332	57719182	chr12:57716332-57719182	0	+	57716332	57716332	8553170	5	180,52,89,276,190,	0,360,1537,1813,2660,
#Deleted in new
chr12	57720210	57721503	chr12:57720210-57721503	0	+	57720210	57720210	8553170	2	308,720,	0,573,
#Partially deleted in new
chr12	57723760	57742157	chr12:57723760-57742157	3	-	57726551	57742071	789624	18	3034,256,223,91,149,129,120,163,105,87,159,110,135,148,86,88,59,246,	0,3213,3599,3920,4176,5878,6734,7030,7605,7795,8048,8642,9084,10265,10558,10831,11608,18151,
#Partially deleted in new
chr12	57725196	57737836	chr12:57725196-57737836	0	-	57726551	57737836	789624	18	1598,256,223,91,149,129,120,163,105,87,159,110,135,148,86,88,59,758,	0,1777,2163,2484,2740,4442,5298,5594,6169,6359,6612,7206,7648,8829,9122,9395,10172,11882,
#Deleted in new
chr12	57726270	57728356	chr12:57726270-57728356	3	+	57726270	57726270	789624	2	108,1392,	0,694,
#Partially deleted in new
chr12	57726551	57738246	chr12:57726551-57738246	1	-	57726551	57738246	789624	19	243,256,223,91,149,60,129,120,163,105,87,159,110,135,148,86,88,59,1168,	0,422,808,1129,1385,1766,3087,3943,4239,4814,5004,5257,5851,6293,7474,7767,8040,8817,10527,
#Deleted in new
chr12	57730382	57731829	chr12:57730382-57731829	0	-	57730480	57731829	789624	5	232,163,105,87,21,	0,408,983,1173,1426,
#Partially deleted in new
chr12	57738012	57747062	chr12:57738012-57747062	0	+	57738012	57738012	8553170	6	189,60,168,81,132,45,	0,5227,7732,8163,8576,9005,
#Partially deleted in new
chr12	57739735	57746210	chr12:57739735-57746210	0	+	57739735	57739735	8553170	3	235,168,35,	0,6009,6440,
#Partially deleted in new
chr12	57739865	57746436	chr12:57739865-57746436	0	+	57739865	57739865	8553170	3	105,168,261,	0,5879,6310,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	57744880	57748232	chr12:57744880-57748232	3	+	57745154	57747290	789624	6	337,168,81,132,114,1017,	0,864,1295,1708,2137,2335,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	57745022	57750211	chr12:57745022-57750211	1	+	57745154	57747290	789624	4	195,129,114,2996,	0,722,1995,2193,
#Deleted in new
chr12	57745038	57747025	chr12:57745038-57747025	0	+	57746178	57747025	789624	5	193,168,81,132,8,	0,706,1137,1550,1979,
#Deleted in new
chr12	57745038	57747178	chr12:57745038-57747178	0	+	57745154	57746424	789624	6	179,168,81,99,132,161,	0,706,1137,1311,1550,1979,
#Deleted in new
chr12	57745049	57747656	chr12:57745049-57747656	0	+	57745154	57746622	789624	6	168,168,81,128,114,441,	0,695,1126,1543,1968,2166,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	57745057	57748205	chr12:57745057-57748205	0	+	57745057	57745057	8553170	4	160,168,81,1617,	0,687,1118,1531,
#Deleted in new
chr12	57745065	57747292	chr12:57745065-57747292	1	+	57745154	57747290	789624	4	152,132,114,77,	0,1523,1952,2150,
#Deleted in new
chr12	57745068	57746394	chr12:57745068-57746394	0	+	57745068	57745068	8553170	4	163,168,81,45,	0,676,1107,1281,
#Deleted in new
chr12	57745381	57747066	chr12:57745381-57747066	0	+	57746178	57747066	789624	5	58,168,81,132,49,	0,363,794,1207,1636,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	57745456	57748218	chr12:57745456-57748218	0	+	57745456	57745456	8553170	4	456,545,114,1003,	0,719,1561,1759,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	57746666	57747855	chr12:57746666-57747855	0	+	57746666	57746666	8553170	2	54,838,	0,351,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	57747726	57752521	chr12:57747726-57752521	3	-	57748524	57751717	0	8	891,136,51,110,168,136,237,347,	0,1455,1727,2929,3196,3480,3773,4448,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	57747726	57752447	chr12:57747726-57752447	1	-	57749312	57751717	789624	7	891,136,51,16,46,237,273,	0,1455,1727,2929,3570,3773,4448,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	57748410	57749795	chr12:57748410-57749795	0	-	57748410	57748410	8553170	3	207,136,342,	0,771,1043,
#Partially deleted in new
chr12	57748425	57752353	chr12:57748425-57752353	1	-	57748524	57749211	789624	4	192,136,51,179,	0,756,1028,3749,
#Partially deleted in new
chr12	57748519	57752326	chr12:57748519-57752326	0	-	57751083	57751717	789624	7	98,136,51,110,168,237,152,	0,662,934,2136,2403,2980,3655,
#Partially deleted in new
chr12	57748590	57752322	chr12:57748590-57752322	0	-	57748590	57751338	789624	7	27,136,51,110,168,136,148,	0,591,863,2065,2332,2616,3584,
#Deleted in new
chr12	57748617	57748682	chr12:57748617-57748682	3	-	57748617	57748617	5263520	1	65,	0,
#Partially deleted in new
chr12	57749190	57752333	chr12:57749190-57752333	0	-	57749190	57749190	8553170	6	127,51,16,46,237,159,	0,263,1465,2106,2309,2984,
#Partially deleted in new
chr12	57749219	57752276	chr12:57749219-57752276	0	-	57749219	57751338	789624	7	98,51,110,168,136,160,102,	0,234,1436,1703,1987,2280,2955,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	57749233	57752295	chr12:57749233-57752295	0	-	57750479	57751717	789624	7	84,51,122,168,136,237,121,	0,220,1208,1689,1973,2266,2941,
#Deleted in new
chr12	57750668	57752349	chr12:57750668-57752349	0	-	57750668	57751338	789624	5	97,168,136,197,175,	0,254,538,831,1506,
#Deleted in new
chr12	57750678	57751877	chr12:57750678-57751877	0	-	57750678	57751717	789624	4	87,168,136,378,	0,244,528,821,
#Deleted in new
chr12	57750826	57752364	chr12:57750826-57752364	0	-	57750826	57750826	8553170	3	264,530,190,	0,380,1348,
#Deleted in new
chr12	57750933	57752322	chr12:57750933-57752322	0	-	57750933	57751717	789624	4	157,136,253,148,	0,273,566,1241,
#Deleted in new
chr12	57751214	57756013	chr12:57751214-57756013	0	-	57751214	57751717	789624	3	128,237,82,	0,285,4717,
#Deleted in new
chr12	57751711	57752115	chr12:57751711-57752115	0	-	57751711	57751717	8553170	2	25,203,	0,201,
#Partially deleted in new
chr12	57755097	57760407	chr12:57755097-57760407	3	+	57755528	57758897	789624	4	788,156,193,1845,	0,1831,3010,3465,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	57755727	57757600	chr12:57755727-57757600	0	+	57755727	57755727	8553170	2	158,672,	0,1201,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	57757486	57759416	chr12:57757486-57759416	1	+	57757933	57758897	789624	2	814,854,	0,1076,
#Deleted in new
chr12	57762333	57767095	chr12:57762333-57767095	0	-	57762333	57762333	8553170	8	922,198,79,173,173,489,191,249,	0,1277,1764,2044,2420,2677,3673,4513,
#Deleted in new
chr12	57762338	57767251	chr12:57762338-57767251	3	-	57763141	57767041	789624	9	917,198,79,173,173,201,203,191,405,	0,1272,1759,2039,2415,2672,2958,3668,4508,
#Deleted in new
chr12	57764136	57765685	chr12:57764136-57765685	0	-	57764136	57765095	789624	5	40,173,173,201,389,	0,241,617,874,1160,
#Deleted in new
chr12	57764543	57765685	chr12:57764543-57765685	0	-	57764543	57764543	8553170	3	383,201,389,	0,467,753,
#Partially deleted in new
chr12	57765010	57768986	chr12:57765010-57768986	0	-	57765010	57768986	789624	4	201,203,191,107,	0,286,996,3869,
#Deleted in new
chr12	57765456	57766511	chr12:57765456-57766511	0	-	57765456	57765456	8553170	2	43,505,	0,550,
#Deleted in new
chr12	57765469	57766456	chr12:57765469-57766456	0	-	57765469	57765469	8553170	3	30,191,23,	0,537,964,
#Partially deleted in new
chr12	57768470	57772793	chr12:57768470-57772793	3	-	57768995	57772083	0	6	681,102,114,185,164,820,	0,832,1094,1301,2623,3503,
#Partially deleted in new
chr12	57768581	57772119	chr12:57768581-57772119	1	-	57769324	57772083	0	5	570,102,114,164,146,	0,721,983,2512,3392,
#Deleted in new
chr12	57768637	57769655	chr12:57768637-57769655	0	-	57769324	57769655	789624	3	514,121,91,	0,665,927,
#Deleted in new
chr12	57769048	57769865	chr12:57769048-57769865	0	-	57769048	57769865	789624	4	103,102,72,94,	0,254,516,723,
#Partially deleted in new
chr12	57769303	57772076	chr12:57769303-57772076	0	-	57769814	57772076	789624	4	101,114,185,103,	0,261,468,2670,
#Partially deleted in new
chr12	57769579	57772116	chr12:57769579-57772116	0	-	57771604	57772083	789624	5	99,185,164,126,143,	0,192,1514,1900,2394,
#Deleted in new
chr12	57770683	57772114	chr12:57770683-57772114	0	-	57770683	57770683	8553170	3	306,164,141,	0,410,1290,
#Deleted in new
chr12	57770756	57772101	chr12:57770756-57772101	0	-	57770756	57770756	8553170	2	501,128,	0,1217,
#Partially deleted in new
chr12	57771491	57780430	chr12:57771491-57780430	1	+	57771574	57780276	789624	4	134,112,139,176,	0,1525,3137,8763,
#Partially deleted in new
chr12	57772199	57780780	chr12:57772199-57780780	1	+	57780508	57780646	789624	3	198,112,526,	0,817,8055,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	57772599	57782403	chr12:57772599-57782403	3	+	57772724	57780646	0	3	302,112,2149,	0,417,7655,
#Partially deleted in new
chr12	57772655	57774767	chr12:57772655-57774767	0	+	57772655	57772655	8553170	3	246,57,139,	0,361,1973,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	57772677	57782541	chr12:57772677-57782541	1	+	57772724	57780276	0	4	224,112,139,2287,	0,339,1951,7577,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	57773027	57787046	chr12:57773027-57787046	1	+	57773027	57784111	789624	6	101,174,38,230,129,7,	0,10082,10587,10913,13135,14012,
#Partially deleted in new
chr12	57773051	57786243	chr12:57773051-57786243	0	+	57773051	57773051	8553170	3	77,174,81,	0,10058,13111,
#Partially deleted in new
chr12	57782588	57797584	chr12:57782588-57797584	3	+	57782801	57796583	0	6	270,174,129,123,88,1408,	0,521,3574,4451,10397,13588,
#Partially deleted in new
chr12	57782760	57797587	chr12:57782760-57797587	1	+	57782801	57796197	0	5	98,174,129,123,1411,	0,349,3402,4279,13416,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	57782775	57796734	chr12:57782775-57796734	1	+	57782801	57796583	0	7	83,174,129,123,63,88,558,	0,334,3387,4264,9189,10210,13401,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	57782780	57786200	chr12:57782780-57786200	0	+	57782801	57783941	789624	5	78,174,38,230,38,	0,329,834,1160,3382,
#Partially deleted in new
chr12	57782786	57808071	chr12:57782786-57808071	1	+	57782801	57807895	789624	6	72,174,129,123,88,208,	0,323,3376,4253,10199,25077,
#Partially deleted in new
chr12	57782786	57802774	chr12:57782786-57802774	1	+	57782801	57802585	789624	7	72,174,129,123,88,91,220,	0,323,3376,4253,10199,19387,19768,
#Partially deleted in new
chr12	57782798	57802631	chr12:57782798-57802631	1	+	57782801	57802631	0	6	60,174,129,123,88,77,	0,311,3364,4241,10187,19756,
#Partially deleted in new
chr12	57782802	57793073	chr12:57782802-57793073	0	+	57783202	57793073	789624	5	75,174,129,123,88,	0,307,3360,4237,10183,
#Partially deleted in new
chr12	57782817	57796261	chr12:57782817-57796261	0	+	57783202	57796261	789624	6	90,174,129,123,88,85,	0,292,3345,4222,10168,13359,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	57797375	57800653	chr12:57797375-57800653	0	-	57797375	57797375	8553170	2	620,859,	0,2419,
#Partially deleted in new
chr12	57797739	57816058	chr12:57797739-57816058	0	-	57814176	57816040	789624	20	256,126,69,189,145,146,180,159,138,101,154,99,79,203,111,109,197,75,115,84,	0,2055,3404,4420,5507,5784,8620,9591,9850,10454,10655,11857,12072,12609,13076,13279,15487,16412,17838,18235,
#Partially deleted in new
chr12	57797777	57801417	chr12:57797777-57801417	0	-	57797777	57797777	8553170	3	218,126,274,	0,2017,3366,
#Partially deleted in new
chr12	57797881	57816471	chr12:57797881-57816471	3	-	57797881	57816040	0	19	114,126,69,189,145,146,180,159,138,101,154,99,79,203,111,109,197,75,497,	0,1913,3262,4278,5365,5642,8478,9449,9708,10312,10513,11715,11930,12467,12934,13137,15345,16270,18093,
#Partially deleted in new
chr12	57802182	57808692	chr12:57802182-57808692	0	-	57802182	57802182	8553170	7	166,145,146,180,397,101,298,	0,1064,1341,4177,5148,6011,6212,
#Partially deleted in new
chr12	57803295	57806489	chr12:57803295-57806489	0	-	57803295	57803295	8553170	2	96,130,	0,3064,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	57803837	57804415	chr12:57803837-57804415	3	+	57803837	57803837	8553170	1	578,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	57805855	57809179	chr12:57805855-57809179	0	-	57805855	57805855	8553170	2	712,986,	0,2338,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	57806131	57807641	chr12:57806131-57807641	0	-	57806131	57806131	8553170	3	408,159,52,	0,1199,1458,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	57806137	57814226	chr12:57806137-57814226	0	-	57806137	57806137	8553170	12	402,159,138,101,154,99,79,203,111,109,197,75,	0,1193,1452,2056,2257,3459,3674,4211,4678,4881,7089,8014,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	57806153	57806260	chr12:57806153-57806260	3	-	57806153	57806153	8553170	1	107,	0,
#Partially deleted in new
chr12	57810900	57818704	chr12:57810900-57818704	0	-	57810900	57816040	789624	6	26,109,197,75,85,76,	0,118,2326,3251,5074,7728,
#Deleted in new
chr12	57814493	57814926	chr12:57814493-57814926	3	+	57814493	57814493	8553170	1	433,	0,
#Partially deleted in new
chr12	57819926	57846739	chr12:57819926-57846739	3	-	57823601	57846435	0	8	3801,186,93,57,102,39,149,368,	0,3977,4300,6419,7069,7625,9521,26445,
#Partially deleted in new
chr12	57822799	57846704	chr12:57822799-57846704	1	-	57823601	57846435	789624	4	928,54,53,333,	0,1104,6744,23572,
#Deleted in new
chr12	57822890	57824543	chr12:57822890-57824543	0	-	57822890	57822890	8553170	3	837,186,317,	0,1013,1336,
#Deleted in new
chr12	57823182	57826402	chr12:57823182-57826402	0	-	57823601	57826402	789624	4	545,102,93,57,	0,721,1044,3163,
#Partially deleted in new
chr12	57823460	57845534	chr12:57823460-57845534	1	-	57823601	57824274	789624	8	267,186,93,57,102,39,149,95,	0,443,766,2885,3535,4091,5987,21979,
#Partially deleted in new
chr12	57823652	57846544	chr12:57823652-57846544	0	-	57827066	57846435	789624	8	75,186,93,57,128,39,149,173,	0,251,574,2693,3343,3899,5795,22719,
#Partially deleted in new
chr12	57823957	57829550	chr12:57823957-57829550	0	-	57823957	57829550	789624	6	132,93,57,102,57,103,	0,269,2388,3038,3576,5490,
#Deleted in new
chr12	57824608	57824692	chr12:57824608-57824692	3	-	57824608	57824608	5263520	1	84,	0,
#Deleted in new
chr12	57826378	57827407	chr12:57826378-57827407	0	-	57826378	57826378	8553170	2	24,412,	0,617,
#Partially deleted in new
chr12	57837091	57842745	chr12:57837091-57842745	3	+	57837091	57837091	8553170	2	123,487,	0,5167,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	57869834	57896482	chr12:57869834-57896482	3	-	57869834	57869834	789624	4	547,93,124,2743,	0,2161,3018,23905,
#Partially deleted in new
chr12	57886360	57893952	chr12:57886360-57893952	0	-	57886360	57886360	8553170	2	336,213,	0,7379,
#Deleted in new
chr12	57894231	57896846	chr12:57894231-57896846	3	+	57894231	57894231	8553170	2	120,1195,	0,1420,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	57906038	57959148	chr12:57906038-57959148	0	+	57906038	57906038	8553170	6	75,46,82,138,84,2462,	0,39589,40956,45719,47567,50648,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	57931527	57936079	chr12:57931527-57936079	1	-	57931527	57931527	8553170	2	210,241,	0,4311,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	57931568	57936059	chr12:57931568-57936059	0	-	57931568	57931568	8553170	2	169,590,	0,3901,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	57931587	57936175	chr12:57931587-57936175	3	-	57931587	57931587	789624	3	150,84,337,	0,3882,4251,
#Partially deleted in new
chr12	57935073	57936063	chr12:57935073-57936063	0	-	57935073	57935073	8553170	2	480,225,	0,765,
#Partially deleted in new
chr12	57941540	57951884	chr12:57941540-57951884	0	+	57941540	57941540	8553170	3	348,82,127,	0,5454,10217,
#Partially deleted in new
chr12	57941576	57957269	chr12:57941576-57957269	3	+	57941701	57956890	789624	6	312,46,82,138,84,583,	0,4051,5418,10181,12029,15110,
#Partially deleted in new
chr12	57941795	57956890	chr12:57941795-57956890	0	+	57941795	57951777	789624	4	93,138,84,204,	0,9962,11810,14891,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	57949740	57956940	chr12:57949740-57956940	0	+	57949740	57949740	8553170	4	92,134,84,254,	0,2021,3865,6946,
#Deleted in new
chr12	57967057	57968399	chr12:57967057-57968399	7	+	57967057	57967057	16724991	2	540,93,	0,1249,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	57977964	57978277	chr12:57977964-57978277	3	-	57977964	57977964	8553170	1	313,	0,
#Deleted in new
chr12	57983794	57984761	chr12:57983794-57984761	7	-	57983794	57983794	16724991	1	967,	0,
#Partially deleted in new
chr12	58087891	58093362	chr12:58087891-58093362	3	+	58087891	58087891	789624	4	221,114,113,36,	0,316,546,5435,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	58094913	58098013	chr12:58094913-58098013	3	-	58094913	58094913	8553170	1	3100,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	58103906	58105935	chr12:58103906-58105935	3	+	58103906	58103906	8553170	1	2029,	0,
#Partially deleted in new
chr12	58244377	58244865	chr12:58244377-58244865	7	+	58244377	58244377	16724991	1	488,	0,
#Deleted in new
chr12	58394595	58395138	chr12:58394595-58395138	7	+	58394595	58394595	16724991	1	543,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	58565958	58781719	chr12:58565958-58781719	0	-	58565958	58565958	8553170	7	630,56,94,79,125,121,149,	0,3145,3316,4743,5369,202653,215612,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	58565959	58781716	chr12:58565959-58781716	3	-	58565959	58565959	789624	8	629,56,94,79,105,672,194,146,	0,3144,3315,4742,5368,42918,50975,215611,
#Partially deleted in new
chr12	58591701	58812667	chr12:58591701-58812667	0	+	58591701	58591701	789624	2	167,254,	0,220712,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	58712183	58781747	chr12:58712183-58781747	0	-	58712183	58712183	8553170	4	169,70,121,177,	0,44779,56428,69387,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	58800660	58812659	chr12:58800660-58812659	0	+	58800660	58800660	8553170	7	187,29,137,108,42,112,246,	0,599,2165,2581,5280,11261,11753,
#Partially deleted in new
chr12	58872148	58920522	chr12:58872148-58920522	3	-	58872571	58920235	789624	19	668,276,144,159,453,282,321,164,72,72,81,144,144,144,144,132,75,72,523,	0,1906,2281,4296,5251,6675,8432,10720,11371,13682,14661,15640,16180,16670,17847,18516,41833,42116,47851,
#Partially deleted in new
chr12	58872148	58919546	chr12:58872148-58919546	1	-	58872571	58919482	789624	19	668,276,144,159,453,282,321,164,72,72,81,144,144,144,144,132,75,72,120,	0,1906,2281,4296,5251,6675,8432,10720,11371,13682,14661,15640,16180,16670,17847,18516,41833,42116,47278,
#Partially deleted in new
chr12	58872547	58920434	chr12:58872547-58920434	0	-	58880407	58920235	789624	20	269,276,144,159,453,282,110,321,164,72,72,81,144,144,144,144,132,75,72,435,	0,1507,1882,3897,4852,6276,7821,8033,10321,10972,13283,14262,15241,15781,16271,17448,18117,41434,41717,47452,
#Deleted in new
chr12	58873550	58874572	chr12:58873550-58874572	0	-	58873983	58874572	789624	2	780,143,	0,879,
#Partially deleted in new
chr12	58874052	58877494	chr12:58874052-58877494	0	-	58874052	58874052	8553170	3	521,159,95,	0,2392,3347,
#Deleted in new
chr12	58880359	58882886	chr12:58880359-58882886	0	-	58880359	58880359	8553170	2	542,18,	0,2509,
#Deleted in new
chr12	58885879	58887035	chr12:58885879-58887035	0	-	58885879	58885879	8553170	2	23,226,	0,930,
#Partially deleted in new
chr12	58888873	58914583	chr12:58888873-58914583	0	-	58888873	58914293	789624	5	89,144,132,75,319,	0,1122,1791,25108,25391,
#Deleted in new
chr12	58913494	58920156	chr12:58913494-58920156	0	-	58913494	58913494	8553170	3	562,72,157,	0,770,6505,
#Partially deleted in new
chr12	58920638	59064238	chr12:58920638-59064238	3	+	58920638	58920638	8553170	4	152,74,103,226,	0,760,135367,143374,
#Deleted in new
chr12	59020168	59020894	chr12:59020168-59020894	7	+	59020168	59020168	16724991	1	726,	0,
#Deleted in new
chr12	59052979	59054184	chr12:59052979-59054184	7	-	59052979	59052979	16724991	1	1205,	0,
#Partially deleted in new
chr12	59366217	59411171	chr12:59366217-59411171	3	-	59366217	59366217	8553170	4	52,135,120,41,	0,36411,36973,44913,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	59369050	59369151	chr12:59369050-59369151	3	-	59369050	59369050	8553170	1	101,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	59450672	59450772	chr12:59450672-59450772	3	-	59450672	59450672	8553170	1	100,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	59523277	59524184	chr12:59523277-59524184	3	-	59523277	59523277	8553170	3	178,281,124,	0,425,783,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	59586792	59586943	chr12:59586792-59586943	3	-	59586792	59586792	8553170	1	151,	0,
#Partially deleted in new
chr12	59596066	59780213	chr12:59596066-59780213	3	+	59704801	59779679	789624	6	170,99,227,144,819,791,	0,59085,108725,175152,178590,183356,
#Partially deleted in new
chr12	59596143	59779989	chr12:59596143-59779989	1	+	59704801	59779679	789624	6	93,99,247,144,819,567,	0,59008,108628,175075,178513,183279,
#Partially deleted in new
chr12	59596161	59720194	chr12:59596161-59720194	1	+	59704801	59720098	789624	4	75,99,247,116,	0,58990,108610,123917,
#Partially deleted in new
chr12	59597058	59779685	chr12:59597058-59779685	1	+	59704801	59779679	789624	7	111,99,132,247,144,819,263,	0,58093,99334,107713,174160,177598,182364,
#Partially deleted in new
chr12	59664676	59779548	chr12:59664676-59779548	0	+	59704801	59779548	789624	5	267,247,144,819,126,	0,40095,106542,109980,114746,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	59689336	59789855	chr12:59689336-59789855	1	+	59704801	59779679	789624	5	134,247,144,819,10433,	0,15435,81882,85320,90086,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	59689344	59735982	chr12:59689344-59735982	0	+	59704801	59733821	789624	5	46,247,87,138,53,	0,15427,44400,44705,46585,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	59689347	59768223	chr12:59689347-59768223	0	+	59704801	59735967	789624	5	123,247,59,78,98,	0,15424,46582,71777,78778,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	59689352	59779696	chr12:59689352-59779696	0	+	59704801	59768256	789624	7	118,247,78,198,144,819,274,	0,15419,71772,78773,81866,85304,90070,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	59689352	59768225	chr12:59689352-59768225	0	+	59689352	59689352	8553170	4	118,247,78,100,	0,15419,71772,78773,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	59689361	59768309	chr12:59689361-59768309	0	+	59689361	59689361	8553170	3	109,247,191,	0,15410,78757,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	59689361	59734085	chr12:59689361-59734085	0	+	59704801	59733753	789624	4	109,247,113,36,	0,15410,44357,44688,
#Partially deleted in new
chr12	59689369	59779689	chr12:59689369-59779689	0	+	59704801	59735967	789624	7	101,247,59,78,144,819,267,	0,15402,46560,71755,81849,85287,90053,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	59689370	59761146	chr12:59689370-59761146	0	+	59704801	59733753	789624	5	100,247,116,59,22,	0,15401,44345,46559,71754,
#Deleted in new
chr12	59719697	59719944	chr12:59719697-59719944	7	-	59719697	59719697	16724991	1	247,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	59769058	59775035	chr12:59769058-59775035	0	+	59771346	59775035	789624	3	274,144,379,	0,2160,5598,
#Deleted in new
chr12	59812101	59812576	chr12:59812101-59812576	7	+	59812101	59812101	16724991	1	475,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	60092863	60096071	chr12:60092863-60096071	3	+	60092863	60092863	8553170	2	46,943,	0,2265,
#Deleted in new
chr12	60215993	60216384	chr12:60215993-60216384	7	+	60215993	60215993	16724991	1	391,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	60341823	60341941	chr12:60341823-60341941	3	-	60341823	60341823	8553170	1	118,	0,
#Deleted in new
chr12	60363821	60363935	chr12:60363821-60363935	3	+	60363821	60363821	8553170	1	114,	0,
#Deleted in new
chr12	60418982	60419293	chr12:60418982-60419293	7	+	60418982	60418982	16724991	1	311,	0,
#Partially deleted in new
chr12	61231158	61232937	chr12:61231158-61232937	7	-	61231158	61231158	16724991	1	1779,	0,
#Deleted in new
chr12	61600066	61600843	chr12:61600066-61600843	7	-	61600066	61600066	16724991	1	777,	0,
#Partially deleted in new
chr12	61708258	62192842	chr12:61708258-62192842	1	-	61710405	61867425	789624	5	2159,125,153,107,1584,	0,45363,46613,159061,483000,
#Partially deleted in new
chr12	61708273	62258823	chr12:61708273-62258823	3	-	61710405	61867425	789624	6	2144,125,153,107,128,61,	0,45348,46598,159046,315378,550489,
#Partially deleted in new
chr12	61708276	62260144	chr12:61708276-62260144	0	-	61720912	61867425	789624	9	2141,238,125,153,107,82,128,148,130,	0,12410,45345,46595,159043,182065,315375,550486,551738,
#Partially deleted in new
chr12	61708276	61827233	chr12:61708276-61827233	1	-	61710405	61753714	789624	4	2141,125,153,80,	0,45345,46595,118877,
#Partially deleted in new
chr12	61710122	62191436	chr12:61710122-62191436	1	-	61710373	61867425	789624	3	295,107,178,	0,157197,481136,
#Partially deleted in new
chr12	61753677	62260170	chr12:61753677-62260170	0	-	61753677	62258764	789624	5	69,153,107,80,161,	0,1194,113642,505085,506332,
#Partially deleted in new
chr12	61754871	62136036	chr12:61754871-62136036	0	-	61754871	61878079	789624	4	153,107,63,232,	0,112448,123206,380933,
#Deleted in new
chr12	61775922	61776400	chr12:61775922-61776400	7	+	61775922	61775922	16724991	1	478,	0,
#Deleted in new
chr12	61879317	61880772	chr12:61879317-61880772	7	+	61879317	61879317	16724991	1	1455,	0,
#Deleted in new
chr12	62021569	62022174	chr12:62021569-62022174	7	-	62021569	62021569	16724991	1	605,	0,
#Partially deleted in new
chr12	62070421	62259754	chr12:62070421-62259754	0	-	62070421	62070421	8553170	5	141,195,79,148,276,	0,127790,136750,188341,189057,
#Partially deleted in new
chr12	62139998	62145643	chr12:62139998-62145643	3	-	62139998	62139998	8553170	2	414,63,	0,5582,
#Partially deleted in new
chr12	62206888	62258955	chr12:62206888-62258955	0	-	62206888	62206888	8553170	2	362,193,	0,51874,
#Partially deleted in new
chr12	62234389	62235515	chr12:62234389-62235515	7	-	62234389	62234389	16724991	1	1126,	0,
#Partially deleted in new
chr12	62242430	62260137	chr12:62242430-62260137	0	-	62242430	62242430	8553170	3	140,80,123,	0,16332,17584,
#Partially deleted in new
chr12	62242430	62260113	chr12:62242430-62260113	0	-	62242430	62242430	8553170	3	140,148,99,	0,16332,17584,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	62242432	62259728	chr12:62242432-62259728	0	-	62242432	62242432	8553170	5	138,1302,192,80,250,	0,9667,11058,16330,17046,
#Partially deleted in new
chr12	62255164	62259039	chr12:62255164-62259039	0	-	62255164	62255164	8553170	2	150,277,	0,3598,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	62258225	62260141	chr12:62258225-62260141	0	-	62258225	62258225	8553170	2	617,127,	0,1789,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	62258783	62279150	chr12:62258783-62279150	0	-	62258783	62258783	8553170	5	59,74,162,105,45,	0,8389,15356,18741,20322,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr12	62260337	62416389	chr12:62260337-62416389	3	+	62260414	62404375	0	21	166,128,131,127,146,62,145,174,159,225,84,95,192,116,273,71,116,150,104,89,12197,	0,33841,42452,54452,61126,65534,94993,121152,123502,123740,129093,129267,129459,130526,130819,131478,131934,132715,135957,140849,143855,
#Partially deleted in new
chr12	62260355	62321489	chr12:62260355-62321489	0	+	62260414	62321489	789624	6	148,128,131,24,127,26,	0,33823,42434,51930,54434,61108,
#Partially deleted in new
chr12	62260356	62406119	chr12:62260356-62406119	1	+	62260414	62404375	0	22	147,128,131,127,146,62,87,145,174,159,225,84,95,192,116,273,71,116,150,104,89,1927,	0,33822,42433,54433,61107,65515,88864,94974,121133,123483,123721,129074,129248,129440,130507,130800,131459,131915,132696,135938,140830,143836,
#Partially deleted in new
chr12	62260358	62260454	chr12:62260358-62260454	3	+	62260358	62260358	5263520	1	96,	0,
#Partially deleted in new
chr12	62260363	62355386	chr12:62260363-62355386	0	+	62260363	62260363	8553170	6	140,128,131,127,146,56,	0,33815,42426,54426,61100,94967,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	62260396	62336690	chr12:62260396-62336690	1	+	62260414	62335190	0	7	107,128,131,127,146,62,1525,	0,33782,42393,54393,61067,65475,74769,
#Partially deleted in new
chr12	62260398	62315073	chr12:62260398-62315073	0	+	62260398	62260398	8553170	4	105,128,131,284,	0,33780,42391,54391,
#Partially deleted in new
chr12	62260406	62294640	chr12:62260406-62294640	0	+	62260406	62260406	8553170	2	97,462,	0,33772,
#Partially deleted in new
chr12	62260406	62303586	chr12:62260406-62303586	0	+	62260406	62260406	8553170	3	97,128,797,	0,33772,42383,
#Partially deleted in new
chr12	62260407	62304896	chr12:62260407-62304896	0	+	62260407	62260407	8553170	4	96,128,131,224,	0,33771,42382,44265,
#Partially deleted in new
chr12	62260427	62327781	chr12:62260427-62327781	0	+	62260427	62327712	789624	7	76,128,131,127,146,62,121,	0,33751,42362,54362,61036,65444,67233,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	62278627	62321569	chr12:62278627-62321569	0	+	62294251	62321569	789624	5	87,128,131,127,106,	0,15551,24162,36162,42836,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	62305594	62325933	chr12:62305594-62325933	0	+	62314804	62325933	789624	4	464,127,146,62,	0,9195,15869,20277,
#Partially deleted in new
chr12	62321460	62335374	chr12:62321460-62335374	0	+	62321460	62328344	789624	4	149,62,113,209,	0,4411,6832,13705,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	62334090	62334197	chr12:62334090-62334197	3	-	62334090	62334090	8553170	1	107,	0,
#Partially deleted in new
chr12	62355010	62381633	chr12:62355010-62381633	0	+	62355010	62355010	8553170	4	64,145,146,144,	0,320,19379,26479,
#Partially deleted in new
chr12	62355427	62389873	chr12:62355427-62389873	0	+	62355427	62355427	8553170	7	48,146,174,463,84,95,77,	0,18962,26062,28412,34003,34177,34369,
#Partially deleted in new
chr12	62392361	62417431	chr12:62392361-62417431	0	+	62392361	62417202	789624	5	26,150,104,89,334,	0,691,3933,8825,24736,
#Partially deleted in new
chr12	62393074	62404791	chr12:62393074-62404791	0	+	62393074	62401208	789624	3	128,89,599,	0,8112,11118,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	62393606	62393880	chr12:62393606-62393880	3	-	62393606	62393606	8553170	1	274,	0,
#Partially deleted in new
chr12	62396283	62404643	chr12:62396283-62404643	0	+	62396283	62396283	8553170	3	115,89,451,	0,4903,7909,
#Deleted in new
chr12	62401157	62404657	chr12:62401157-62404657	0	+	62401157	62401157	8553170	2	118,465,	0,3035,
#Boundary problem: need 35, got 0, diff 35, mapped 0.0
chr12	62466816	62600479	chr12:62466816-62600479	3	+	62467207	62592749	789624	35	502,64,128,132,130,98,126,195,125,137,154,233,82,185,113,105,81,74,91,102,111,176,163,294,199,623,144,18,129,191,61,124,208,83,7894,	0,17353,27098,28199,32102,33966,34756,41469,57698,58267,59132,65621,68028,68708,70334,70785,71279,71435,71598,76280,78081,80080,82851,86064,89177,93674,98420,99197,99505,104575,111628,113480,118477,121257,125769,
#Boundary problem: need 36, got 0, diff 36, mapped 0.0
chr12	62466816	62597583	chr12:62466816-62597583	1	+	62467207	62592749	789624	36	502,64,128,132,130,98,126,195,125,137,154,233,82,185,113,105,81,74,91,102,3,111,176,163,294,199,623,144,18,129,191,61,124,208,83,4998,	0,17353,27098,28199,32102,33966,34756,41469,57698,58267,59132,65621,68028,68708,70334,70785,71279,71435,71598,76280,77949,78081,80080,82851,86064,89177,93674,98420,99197,99505,104575,111628,113480,118477,121257,125769,
#Partially deleted in new
chr12	62466821	62593278	chr12:62466821-62593278	1	+	62467207	62588893	789624	36	497,64,128,132,130,98,126,195,125,137,154,233,82,185,113,105,81,74,91,102,111,176,163,294,199,623,144,18,129,191,61,124,208,83,61,693,	0,17348,27093,28194,32097,33961,34751,41464,57693,58262,59127,65616,68023,68703,70329,70780,71274,71430,71593,76275,78076,80075,82846,86059,89172,93669,98415,99192,99500,104570,111623,113475,118472,121252,122034,125764,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	62466843	62509145	chr12:62466843-62509145	0	+	62466843	62466843	8553170	5	475,130,98,126,860,	0,32075,33939,34729,41442,
#Partially deleted in new
chr12	62466847	62592865	chr12:62466847-62592865	1	+	62467207	62592749	789624	34	471,64,128,132,130,98,126,195,125,137,154,233,82,185,113,105,81,74,91,102,111,176,163,294,199,623,144,129,191,61,124,208,83,280,	0,17322,27067,28168,32071,33935,34725,41438,57667,58236,59101,65590,67997,68677,70303,70754,71248,71404,71567,76249,78050,80049,82820,86033,89146,93643,98389,99474,104544,111597,113449,118446,121226,125738,
#Partially deleted in new
chr12	62466847	62592865	chr12:62466847-62592865	0	+	62467207	62470721	789624	36	471,78,64,128,132,130,98,126,195,125,137,154,233,82,185,113,105,81,74,91,102,111,176,163,294,199,623,144,18,129,191,61,124,208,83,280,	0,3853,17322,27067,28168,32071,33935,34725,41438,57667,58236,59101,65590,67997,68677,70303,70754,71248,71404,71567,76249,78050,80049,82820,86033,89146,93643,98389,99166,99474,104544,111597,113449,118446,121226,125738,
#Partially deleted in new
chr12	62466847	62592865	chr12:62466847-62592865	1	+	62467207	62592749	789624	34	471,64,128,132,130,98,126,195,125,137,154,233,82,116,113,105,81,74,91,102,111,176,163,294,199,623,144,129,191,61,124,208,83,280,	0,17322,27067,28168,32071,33935,34725,41438,57667,58236,59101,65590,67997,68677,70303,70754,71248,71404,71567,76249,78050,80049,82820,86033,89146,93643,98389,99474,104544,111597,113449,118446,121226,125738,
#Partially deleted in new
chr12	62466848	62553365	chr12:62466848-62553365	1	+	62467207	62553183	789624	24	470,64,128,132,130,98,126,195,125,137,154,233,82,185,113,105,81,74,91,102,111,176,163,485,	0,17321,27066,28167,32070,33934,34724,41437,57666,58235,59100,65589,67996,68676,70302,70753,71247,71403,71566,76248,78049,80048,82819,86032,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	62467061	62493936	chr12:62467061-62493936	0	+	62467207	62490040	789624	4	257,64,81,22,	0,17108,22974,26853,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	62482348	62484932	chr12:62482348-62484932	3	-	62482348	62482348	8553170	2	684,164,	0,2420,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	62545581	62545679	chr12:62545581-62545679	3	-	62545581	62545581	8553170	1	98,	0,
#Partially deleted in new
chr12	62559909	62593081	chr12:62559909-62593081	0	+	62559909	62559909	8553170	9	1204,144,129,191,61,124,208,83,496,	0,5327,6412,11482,18535,20387,25384,28164,32676,
#Partially deleted in new
chr12	62564972	62571423	chr12:62564972-62571423	0	+	62564972	62564972	8553170	3	408,129,32,	0,1349,6419,
#Partially deleted in new
chr12	62565951	62571519	chr12:62565951-62571519	0	+	62565951	62565951	8553170	2	499,128,	0,5440,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	62578453	62585745	chr12:62578453-62585745	0	+	62578453	62578453	8553170	3	52,124,452,	0,1843,6840,
#Partially deleted in new
chr12	62587851	62592858	chr12:62587851-62592858	0	+	62587851	62587851	8553170	2	305,273,	0,4734,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	62601750	62603690	chr12:62601750-62603690	3	-	62601750	62601750	789624	1	1940,	0,
#Partially deleted in new
chr12	62602648	62603428	chr12:62602648-62603428	0	-	62602648	62602648	8553170	1	780,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	62602751	62622213	chr12:62602751-62622213	3	+	62602751	62602751	8553170	2	84,8609,	0,10853,
#Partially deleted in new
chr12	62603685	62603769	chr12:62603685-62603769	3	+	62603685	62603685	5263520	1	84,	0,
#Partially deleted in new
chr12	62603908	62604399	chr12:62603908-62604399	3	+	62603908	62603908	8553170	1	491,	0,
#Partially deleted in new
chr12	62643981	62935037	chr12:62643981-62935037	3	-	62648488	62934736	789624	10	4655,152,108,64,119,85,113,345,166,546,	0,23196,45717,49954,76189,93520,144244,157834,188132,290510,
#Partially deleted in new
chr12	62648573	62721020	chr12:62648573-62721020	0	-	62648573	62648573	8553170	6	63,152,108,64,119,356,	0,18604,41125,45362,71597,72091,
#Deleted in new
chr12	62658822	62659225	chr12:62658822-62659225	7	+	62658822	62658822	16724991	1	403,	0,
#Partially deleted in new
chr12	62689749	62788484	chr12:62689749-62788484	0	-	62689749	62689749	8553170	5	57,64,119,85,259,	0,4186,30421,47752,98476,
#Partially deleted in new
chr12	62755226	62756233	chr12:62755226-62756233	7	+	62755226	62755226	16724991	1	1007,	0,
#Partially deleted in new
chr12	62801930	62934048	chr12:62801930-62934048	0	-	62801930	62801930	8553170	3	230,166,126,	0,30183,131992,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	62801940	62840228	chr12:62801940-62840228	0	-	62801940	62801940	8553170	3	220,166,82,	0,30173,38206,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	62850737	62850901	chr12:62850737-62850901	3	-	62850737	62850737	8553170	1	164,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	62935700	62935802	chr12:62935700-62935802	3	+	62935700	62935700	8553170	1	102,	0,
#Partially deleted in new
chr12	62965324	62965969	chr12:62965324-62965969	7	+	62965324	62965324	16724991	1	645,	0,
#Deleted in new
chr12	63002468	63002795	chr12:63002468-63002795	7	+	63002468	63002468	16724991	1	327,	0,
#Deleted in new
chr12	63003552	63004694	chr12:63003552-63004694	5	+	63003552	63003552	16724991	1	1142,	0,
#Deleted in new
chr12	63003678	63006902	chr12:63003678-63006902	7	+	63003678	63003678	16724991	1	3224,	0,
#Deleted in new
chr12	63004337	63006541	chr12:63004337-63006541	3	-	63004337	63004337	8553170	3	324,138,73,	0,591,2131,
#Deleted in new
chr12	63055274	63055765	chr12:63055274-63055765	7	-	63055274	63055274	16724991	1	491,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	63142758	63150942	chr12:63142758-63150942	3	-	63147358	63150836	0	2	4887,1076,	0,7108,
#Partially deleted in new
chr12	63145233	63150179	chr12:63145233-63150179	0	-	63145363	63150179	789624	3	153,225,313,	0,2187,4633,
#Partially deleted in new
chr12	63151064	63154006	chr12:63151064-63154006	3	+	63151064	63151064	8553170	3	28,158,147,	0,1416,2795,
#Partially deleted in new
chr12	63271403	63272336	chr12:63271403-63272336	7	+	63271403	63271403	16724991	1	933,	0,
#Partially deleted in new
chr12	63292624	63360037	chr12:63292624-63360037	3	-	63292624	63292624	8553170	2	312,162,	0,67251,
#Partially deleted in new
chr12	63558912	63668577	chr12:63558912-63668577	3	-	63560511	63668393	789624	22	1750,126,100,175,120,25,47,72,102,81,60,87,78,100,92,58,94,121,138,88,25,521,	0,10311,11845,21749,23493,24899,35174,37053,38896,41393,49703,58391,59238,62325,65127,67556,85490,88332,102431,104845,106922,109144,
#Partially deleted in new
chr12	63560058	63569469	chr12:63560058-63569469	0	-	63560058	63560058	8553170	2	604,246,	0,9165,
#Partially deleted in new
chr12	63560195	63584162	chr12:63560195-63584162	0	-	63560195	63560195	8553170	6	467,126,100,175,120,351,	0,9028,10562,20466,22210,23616,
#Partially deleted in new
chr12	63560350	63608674	chr12:63560350-63608674	0	-	63591039	63608674	789624	11	312,126,100,120,25,129,47,72,102,81,59,	0,8873,10407,22055,23461,30648,33736,35615,37458,39955,48265,
#Partially deleted in new
chr12	63594086	63668542	chr12:63594086-63668542	0	-	63661414	63668393	789624	14	47,72,102,81,60,87,78,100,58,94,121,138,25,486,	0,1879,3722,6219,14529,23217,24064,27151,32382,50316,53158,67257,71748,73970,
#Partially deleted in new
chr12	63597893	63620222	chr12:63597893-63620222	0	-	63597893	63619993	789624	6	17,81,60,87,78,280,	0,2412,10722,19410,20257,22049,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	63623787	63795718	chr12:63623787-63795718	3	-	63623787	63623787	8553170	2	37,238,	0,171693,
#Partially deleted in new
chr12	63651626	63651930	chr12:63651626-63651930	7	+	63651626	63651626	16724991	1	304,	0,
#Partially deleted in new
chr12	63660894	63668939	chr12:63660894-63668939	0	-	63660894	63660894	8553170	4	587,88,25,182,	0,2863,4940,7863,
#Partially deleted in new
chr12	63661360	63668535	chr12:63661360-63668535	0	-	63661360	63663778	789624	5	121,88,25,100,157,	0,2397,4474,5104,7018,
#Deleted in new
chr12	63668121	63668849	chr12:63668121-63668849	0	-	63668121	63668393	789624	2	413,92,	0,636,
#Partially deleted in new
chr12	63682522	63715476	chr12:63682522-63715476	5	-	63682522	63682522	16724991	3	2561,113,77,	0,5857,32877,
#Partially deleted in new
chr12	63684747	63724935	chr12:63684747-63724935	7	-	63684747	63684747	16724991	4	334,112,76,157,	0,3634,30655,40031,
#Deleted in new
chr12	63760357	63760612	chr12:63760357-63760612	7	-	63760357	63760357	16724991	1	255,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	63779802	63809520	chr12:63779802-63809520	3	+	63779960	63809092	789624	6	327,156,103,315,171,846,	0,1216,5167,22288,25431,28872,
#Partially deleted in new
chr12	63779841	63785389	chr12:63779841-63785389	0	+	63779841	63779841	8553170	3	288,156,420,	0,1177,5128,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	63779865	63809100	chr12:63779865-63809100	0	+	63779960	63782578	789624	7	264,156,164,103,315,171,426,	0,1153,2675,5104,22225,25368,28809,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	63780116	63802203	chr12:63780116-63802203	0	+	63780116	63780116	8553170	5	346,156,164,103,113,	0,902,2424,4853,21974,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	63780125	63809558	chr12:63780125-63809558	1	+	63805270	63809092	789624	6	337,156,103,315,171,884,	0,893,4844,21965,25108,28549,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	63784969	63790553	chr12:63784969-63790553	0	+	63784969	63784969	8553170	2	103,235,	0,5349,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	63803704	63808976	chr12:63803704-63808976	0	+	63803704	63803704	8553170	2	1700,302,	0,4970,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	63804738	63808854	chr12:63804738-63808854	1	-	63804738	63804738	8553170	2	1142,140,	0,3976,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	63804950	63809481	chr12:63804950-63809481	0	+	63804950	63804950	8553170	1	4531,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	63808844	63822156	chr12:63808844-63822156	3	-	63808844	63808844	789624	4	96,101,138,228,	0,3362,7356,13084,
#Partially deleted in new
chr12	63822020	63823895	chr12:63822020-63823895	7	+	63822020	63822020	16724991	1	1875,	0,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr12	63844292	64162221	chr12:63844292-64162221	3	+	63844816	64142672	789624	22	591,196,163,63,183,129,222,102,198,85,28,103,61,78,135,106,225,80,181,135,340,19927,	0,139654,145617,172657,198497,199154,218624,220825,234626,235993,242706,246983,250639,250834,252948,264639,267469,271521,281684,283297,283568,298002,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr12	63844760	64147833	chr12:63844760-64147833	1	+	63983999	64142672	789624	22	123,196,163,63,183,129,222,102,198,85,28,34,61,78,135,106,225,80,181,135,340,5539,	0,139186,145149,172189,198029,198686,218156,220357,234158,235525,242238,247132,250171,250366,252480,264171,267001,271053,281216,282829,283100,297534,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	63844802	64081924	chr12:63844802-64081924	0	+	63844802	63844802	8553170	10	81,196,163,63,183,129,222,102,198,1639,	0,139144,145107,172147,197987,198644,218114,220315,234116,235483,
#Deleted in new
chr12	63871738	63872044	chr12:63871738-63872044	7	-	63871738	63871738	16724991	1	306,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	63878786	63879474	chr12:63878786-63879474	3	+	63878786	63878786	8553170	2	247,268,	0,420,
#Deleted in new
chr12	63887378	63888598	chr12:63887378-63888598	7	-	63887378	63887378	16724991	1	1220,	0,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr12	63982524	64143780	chr12:63982524-64143780	1	+	63983999	64142672	789624	21	1618,163,63,183,129,222,102,198,85,28,34,61,78,135,106,225,80,181,135,340,1486,	0,7385,34425,60265,60922,80392,82593,96394,97761,104474,109368,112407,112602,114716,126407,129237,133289,143452,145065,145336,159770,
#Partially deleted in new
chr12	64032411	64032665	chr12:64032411-64032665	7	+	64032411	64032411	16724991	1	254,	0,
#Partially deleted in new
chr12	64038561	64097618	chr12:64038561-64097618	3	-	64038561	64038561	8553170	3	402,136,133,	0,4243,58924,
#Partially deleted in new
chr12	64042793	64043627	chr12:64042793-64043627	0	+	64042793	64042793	8553170	2	179,181,	0,653,
#Partially deleted in new
chr12	64108762	64120489	chr12:64108762-64120489	3	-	64108762	64108762	8553170	2	334,56,	0,11671,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	64111810	64116005	chr12:64111810-64116005	0	+	64111810	64111810	8553170	2	176,192,	0,4003,
#Partially deleted in new
chr12	64127636	64142566	chr12:64127636-64142566	0	+	64127636	64127636	8553170	2	564,272,	0,14658,
#Deleted in new
chr12	64146387	64147857	chr12:64146387-64147857	3	-	64146387	64146387	8553170	2	144,318,	0,1152,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	64186315	64222265	chr12:64186315-64222265	1	-	64187578	64222237	789624	4	1337,812,286,263,	0,7531,29362,35687,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	64191082	64222291	chr12:64191082-64222291	3	-	64193841	64222237	789624	3	3576,286,289,	0,24595,30920,
#Partially deleted in new
chr12	64192638	64222296	chr12:64192638-64222296	1	-	64193841	64222237	789624	3	2020,286,135,	0,23039,29523,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	64204792	64204899	chr12:64204792-64204899	3	+	64204792	64204792	8553170	1	107,	0,
#Deleted in new
chr12	64221496	64222263	chr12:64221496-64222263	0	-	64221496	64221496	8553170	2	405,261,	0,506,
#Deleted in new
chr12	64221698	64222272	chr12:64221698-64222272	0	-	64221698	64221698	8553170	1	574,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	64222336	64397065	chr12:64222336-64397065	7	+	64222336	64222336	16724991	5	207,112,382,102,563,	0,5537,166696,169240,174166,
#Partially deleted in new
chr12	64228559	64228675	chr12:64228559-64228675	3	-	64228559	64228559	8553170	1	116,	0,
#Partially deleted in new
chr12	64264761	64390691	chr12:64264761-64390691	1	-	64267182	64390565	789624	11	2527,179,75,75,124,90,107,145,73,163,378,	0,5774,10139,10536,12918,19902,21192,38873,66198,88132,125552,
#Deleted in new
chr12	64266412	64266766	chr12:64266412-64266766	7	+	64266412	64266412	16724991	1	354,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	64266436	64391192	chr12:64266436-64391192	3	-	64267182	64390565	789624	13	852,179,75,75,124,90,107,145,74,406,73,163,879,	0,4099,8464,8861,11243,18227,19517,37198,46242,52138,64523,86457,123877,
#Partially deleted in new
chr12	64266982	64270573	chr12:64266982-64270573	0	-	64266982	64266982	8553170	3	306,145,38,	0,556,3553,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	64266982	64293383	chr12:64266982-64293383	0	-	64266982	64266982	8553170	8	306,179,75,75,124,90,107,103,	0,3553,7918,8315,10697,17681,18971,26298,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	64266982	64293383	chr12:64266982-64293383	0	-	64266982	64266982	8553170	7	306,179,75,75,90,107,103,	0,3553,7918,8315,17681,18971,26298,
#Partially deleted in new
chr12	64270684	64286077	chr12:64270684-64286077	0	-	64270684	64270684	8553170	4	30,472,90,124,	0,4216,13979,15269,
#Partially deleted in new
chr12	64303749	64390526	chr12:64303749-64390526	0	-	64303749	64390526	789624	5	30,74,73,163,213,	0,8929,27210,49144,86564,
#Partially deleted in new
chr12	64338177	64338797	chr12:64338177-64338797	7	-	64338177	64338177	16724991	1	620,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	64390741	64397065	chr12:64390741-64397065	5	+	64390741	64390741	16724991	3	687,102,563,	0,835,5761,
#Partially deleted in new
chr12	64396532	64396997	chr12:64396532-64396997	5	+	64396532	64396532	16724991	1	465,	0,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr12	64404349	64451127	chr12:64404349-64451127	3	+	64410035	64448131	789624	25	455,134,83,57,70,219,185,169,237,39,63,125,145,120,95,70,239,286,190,117,116,48,72,57,3023,	0,5612,10557,12348,13696,14526,15720,16003,16885,18655,18832,20249,20688,20988,21465,23701,25699,27188,29064,30157,30444,31277,34894,40725,43755,
#Partially deleted in new
chr12	64405045	64416736	chr12:64405045-64416736	0	+	64410035	64416736	789624	4	292,134,83,39,	0,4916,9861,11652,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	64409656	64420185	chr12:64409656-64420185	0	+	64410035	64420185	789624	6	439,83,57,70,219,116,	0,5250,7041,8389,9219,10413,
#Partially deleted in new
chr12	64423179	64433434	chr12:64423179-64433434	0	+	64423179	64423179	8553170	8	65,125,420,95,70,239,286,21,	0,1419,1858,2635,4871,6869,8358,10234,
#Partially deleted in new
chr12	64424703	64431679	chr12:64424703-64431679	0	+	64424703	64425408	789624	7	20,101,120,95,70,239,142,	0,334,634,1111,3347,5345,6834,
#Partially deleted in new
chr12	64425618	64430210	chr12:64425618-64430210	0	+	64425618	64425618	8553170	3	291,70,162,	0,2432,4430,
#Partially deleted in new
chr12	64442509	64443330	chr12:64442509-64443330	7	-	64442509	64442509	16724991	2	337,167,	0,654,
#Deleted in new
chr12	64451590	64452901	chr12:64451590-64452901	3	-	64451590	64451590	8553170	1	1311,	0,
#Partially deleted in new
chr12	64451879	64502108	chr12:64451879-64502108	3	+	64455870	64501381	0	21	308,118,141,130,182,161,111,180,197,59,92,102,79,122,77,40,102,97,107,72,779,	0,3960,8309,12454,15021,22350,28132,29962,32423,33575,34046,36607,38161,43603,43819,44487,45069,45283,45768,46088,49450,
#Partially deleted in new
chr12	64452189	64464415	chr12:64452189-64464415	0	+	64455870	64464415	789624	4	206,118,141,82,	0,3650,7999,12144,
#Partially deleted in new
chr12	64452450	64464399	chr12:64452450-64464399	0	+	64455870	64464399	789624	4	188,118,141,66,	0,3389,7738,11883,
#Partially deleted in new
chr12	64452474	64464406	chr12:64452474-64464406	0	+	64460257	64464406	789624	4	164,41,141,73,	0,3442,7714,11859,
#Partially deleted in new
chr12	64484040	64485486	chr12:64484040-64485486	0	+	64484040	64484040	8553170	2	459,32,	0,1414,
#Partially deleted in new
chr12	64484406	64488586	chr12:64484406-64488586	0	+	64484406	64484406	8553170	3	93,563,100,	0,1048,4080,
#Deleted in new
chr12	64495367	64495931	chr12:64495367-64495931	0	+	64495367	64495367	8553170	2	237,233,	0,331,
#Deleted in new
chr12	64497013	64497921	chr12:64497013-64497921	0	+	64497013	64497013	8553170	3	37,97,274,	0,149,634,
#Partially deleted in new
chr12	64507000	64694912	chr12:64507000-64694912	3	+	64507160	64694912	789624	6	329,125,108,238,110,150,	0,34580,177786,181215,184469,187762,
#Partially deleted in new
chr12	64507165	64533638	chr12:64507165-64533638	3	-	64507165	64507165	8553170	3	310,95,307,	0,8341,26166,
#Partially deleted in new
chr12	64533267	64541705	chr12:64533267-64541705	0	+	64533267	64541705	789624	2	67,125,	0,8313,
#Deleted in new
chr12	64575664	64575741	chr12:64575664-64575741	3	+	64575664	64575664	8553170	1	77,	0,
#Partially deleted in new
chr12	64599077	64609459	chr12:64599077-64609459	3	-	64599077	64599077	8553170	2	139,115,	0,10267,
#Partially deleted in new
chr12	64610512	64695412	chr12:64610512-64695412	0	+	64610632	64691523	789624	4	231,108,110,650,	0,74274,80957,84250,
#Partially deleted in new
chr12	64610512	64695182	chr12:64610512-64695182	1	+	64610632	64694912	789624	6	29,125,108,238,110,420,	0,106,74274,77703,80957,84250,
#Partially deleted in new
chr12	64610512	64697567	chr12:64610512-64697567	1	+	64610632	64694912	789624	5	231,108,238,110,2805,	0,74274,77703,80957,84250,
#Deleted in new
chr12	64610521	64611650	chr12:64610521-64611650	0	+	64610521	64610521	8553170	2	222,213,	0,916,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	64622508	64622605	chr12:64622508-64622605	3	+	64622508	64622508	5263520	1	97,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	64622508	64622605	chr12:64622508-64622605	3	-	64622508	64622508	5263520	1	97,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	64654059	64655019	chr12:64654059-64655019	3	-	64654059	64654059	8553170	2	218,264,	0,696,
#Deleted in new
chr12	64696190	64696550	chr12:64696190-64696550	3	-	64696190	64696190	8553170	1	360,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	64709457	64710513	chr12:64709457-64710513	3	+	64709457	64709457	8553170	1	1056,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	64713444	64752871	chr12:64713444-64752871	1	-	64716740	64752781	789624	13	3375,161,111,108,102,104,119,83,168,99,66,207,174,	0,6577,8150,9561,15511,23559,25936,27161,29696,31364,32214,34267,39253,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	64713448	64759447	chr12:64713448-64759447	3	-	64716740	64759276	789624	14	3371,161,111,108,102,104,119,83,168,99,66,207,60,363,	0,6573,8146,9557,15507,23555,25932,27157,29692,31360,32210,34263,39249,45636,
#Partially deleted in new
chr12	64716461	64759406	chr12:64716461-64759406	1	-	64716740	64759276	789624	15	358,161,111,108,102,104,119,83,168,99,66,207,60,96,322,	0,3560,5133,6544,12494,20542,22919,24144,26679,28347,29197,31250,36236,40205,42623,
#Partially deleted in new
chr12	64716474	64759431	chr12:64716474-64759431	1	-	64716740	64759276	789624	13	345,161,111,108,102,104,119,83,168,99,66,207,347,	0,3547,5120,6531,12481,20529,22906,24131,26666,28334,29184,31237,42610,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	64716608	64746238	chr12:64716608-64746238	0	-	64716608	64716608	8553170	11	211,161,111,108,102,104,119,83,168,99,580,	0,3413,4986,6397,12347,20395,22772,23997,26532,28200,29050,
#Partially deleted in new
chr12	64720038	64729154	chr12:64720038-64729154	0	-	64720038	64720038	8553170	4	144,111,108,199,	0,1556,2967,8917,
#Partially deleted in new
chr12	64720050	64744890	chr12:64720050-64744890	0	-	64720050	64744890	789624	8	132,111,108,104,119,83,168,82,	0,1544,2955,16953,19330,20555,23090,24758,
#Partially deleted in new
chr12	64722832	64729218	chr12:64722832-64729218	0	-	64722832	64722832	8553170	2	281,263,	0,6123,
#Partially deleted in new
chr12	64739403	64752971	chr12:64739403-64752971	0	-	64739403	64752721	789624	8	96,83,168,99,66,207,60,127,	0,1202,3737,5405,6255,8308,13294,13441,
#Partially deleted in new
chr12	64780515	64830500	chr12:64780515-64830500	0	+	64780808	64830500	789624	5	771,165,62,66,124,	0,5365,47319,47928,49861,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	64781192	64818770	chr12:64781192-64818770	0	+	64781192	64781192	8553170	4	94,165,22,315,	0,4688,6167,37263,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	64786010	64881032	chr12:64786010-64881032	1	+	64830436	64875788	789624	13	35,22,62,66,126,186,169,169,106,113,140,207,6032,	0,1349,41824,42433,44366,46108,50479,52672,57369,78657,80753,84591,88990,
#Partially deleted in new
chr12	64824571	64875788	chr12:64824571-64875788	3	+	64824879	64875788	789624	12	462,62,66,126,186,169,169,106,113,140,207,788,	0,3263,3872,5805,7547,11918,14111,18808,40096,42192,46030,50429,
#Partially deleted in new
chr12	64824666	64832205	chr12:64824666-64832205	0	+	64824879	64832205	789624	4	367,62,66,87,	0,3168,3777,7452,
#Partially deleted in new
chr12	64824669	64836511	chr12:64824669-64836511	0	+	64830436	64836511	789624	7	45,214,62,66,126,186,22,	0,714,3165,3774,5707,7449,11820,
#Deleted in new
chr12	64867955	64868699	chr12:64867955-64868699	7	-	64867955	64867955	16724991	1	744,	0,
#Partially deleted in new
chr12	64883393	64977522	chr12:64883393-64977522	1	+	64883393	64883393	789624	3	472,122,2952,	0,17183,91177,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	64883766	64990607	chr12:64883766-64990607	3	+	64883766	64883766	8553170	5	99,170,96,127,1377,	0,97853,99291,103962,105464,
#Partially deleted in new
chr12	64883773	64974611	chr12:64883773-64974611	1	+	64883773	64883773	8553170	5	92,107,147,170,41,	0,1420,63542,69879,90797,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	64920844	64982524	chr12:64920844-64982524	3	-	64920844	64920844	789624	3	226,104,117,	0,36909,61563,
#Deleted in new
chr12	64939022	64939117	chr12:64939022-64939117	3	+	64939022	64939022	8553170	1	95,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	65017467	65054124	chr12:65017467-65054124	3	+	65017467	65017467	8553170	3	140,895,23,	0,1879,36634,
#Partially deleted in new
chr12	65050625	65121566	chr12:65050625-65121566	3	-	65051348	65121191	0	10	845,96,96,96,96,96,141,109,140,523,	0,4492,5405,11855,16015,17069,18138,27120,69791,70418,
#Partially deleted in new
chr12	65051306	65066659	chr12:65051306-65066659	0	-	65051348	65066659	789624	5	164,96,54,96,19,	0,3811,4766,11174,15334,
#Partially deleted in new
chr12	65067742	65120686	chr12:65067742-65120686	0	-	65067742	65120518	789624	4	48,141,109,270,	0,1021,10003,52674,
#Deleted in new
chr12	65134687	65135273	chr12:65134687-65135273	7	+	65134687	65134687	16724991	1	586,	0,
#Partially deleted in new
chr12	65169570	65248327	chr12:65169570-65248327	3	+	65169596	65246325	0	13	1548,38,67,68,80,146,102,103,179,82,106,79,2166,	0,41355,46406,48981,68931,69098,70358,70565,71338,73817,76098,76290,76591,
#Partially deleted in new
chr12	65169582	65210945	chr12:65169582-65210945	0	+	65169582	65169582	8553170	2	836,20,	0,41343,
#Deleted in new
chr12	65171261	65171917	chr12:65171261-65171917	3	+	65171261	65171261	8553170	1	656,	0,
#Partially deleted in new
chr12	65240565	65245709	chr12:65240565-65245709	0	+	65240565	65240565	8553170	3	522,82,41,	0,2822,5103,
#Partially deleted in new
chr12	65243448	65246281	chr12:65243448-65246281	0	+	65243448	65243448	8553170	3	21,271,120,	0,2220,2713,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	65245299	65246539	chr12:65245299-65246539	0	+	65245299	65245299	8553170	3	475,79,378,	0,561,862,
#Deleted in new
chr12	65245549	65246390	chr12:65245549-65246390	0	+	65245549	65245549	8553170	2	390,229,	0,612,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	65278642	65466907	chr12:65278642-65466907	1	+	65308579	65463322	789624	7	223,127,109,78,29,98,3753,	0,29886,48183,49883,90355,175085,184512,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	65278642	65466907	chr12:65278642-65466907	3	+	65278768	65463322	789624	6	223,109,78,29,98,3753,	0,48183,49883,90355,175085,184512,
#Partially deleted in new
chr12	65278668	65463192	chr12:65278668-65463192	0	+	65278768	65308566	789624	5	197,127,29,98,38,	0,29860,90329,175059,184486,
#Partially deleted in new
chr12	65278703	65316317	chr12:65278703-65316317	0	+	65278703	65278703	8553170	3	162,127,285,	0,29825,37329,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	65278731	65454261	chr12:65278731-65454261	1	+	65278768	65453897	789624	5	134,109,78,29,534,	0,48094,49794,90266,174996,
#Partially deleted in new
chr12	65278741	65463389	chr12:65278741-65463389	1	+	65308579	65463322	789624	8	124,164,127,109,78,29,98,235,	0,28121,29787,48084,49784,90256,174986,184413,
#Partially deleted in new
chr12	65278925	65453787	chr12:65278925-65453787	0	+	65308579	65453787	789624	6	124,127,109,78,29,60,	0,29603,47900,49600,90072,174802,
#Partially deleted in new
chr12	65278925	65463376	chr12:65278925-65463376	1	+	65308579	65463322	789624	8	146,164,127,109,78,29,98,222,	0,27937,29603,47900,49600,90072,174802,184229,
#Partially deleted in new
chr12	65278986	65463258	chr12:65278986-65463258	0	+	65308579	65463258	789624	7	85,127,109,78,29,98,104,	0,29542,47839,49539,90011,174741,184168,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	65278986	65466898	chr12:65278986-65466898	1	+	65308579	65463322	789624	7	85,127,109,78,29,98,3744,	0,29542,47839,49539,90011,174741,184168,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	65279091	65466858	chr12:65279091-65466858	1	+	65308579	65463322	789624	7	426,127,109,78,29,98,3704,	0,29437,47734,49434,89906,174636,184063,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	65279484	65466868	chr12:65279484-65466868	1	+	65308579	65463322	789624	8	33,164,127,109,78,29,98,3714,	0,27378,29044,47341,49041,89513,174243,183670,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	65281656	65286728	chr12:65281656-65286728	3	+	65281656	65281656	8553170	2	398,3059,	0,2013,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	65326874	65488244	chr12:65326874-65488244	0	+	65326874	65488090	789624	5	60,78,29,98,241,	0,1651,42123,126853,161129,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	65328535	65491430	chr12:65328535-65491430	0	+	65328535	65490707	789624	5	68,29,98,58,725,	0,40462,125192,159468,162170,
#Partially deleted in new
chr12	65344133	65463344	chr12:65344133-65463344	0	+	65344133	65344133	8553170	4	102,29,98,190,	0,24864,109594,119021,
#Deleted in new
chr12	65418730	65420027	chr12:65418730-65420027	7	-	65418730	65418730	16724991	1	1297,	0,
#Partially deleted in new
chr12	65466819	65642198	chr12:65466819-65642198	3	-	65466819	65466819	789624	4	315,157,58,160,	0,33108,103171,175219,
#Partially deleted in new
chr12	65499886	65558689	chr12:65499886-65558689	1	-	65499886	65499886	8553170	3	198,240,288,	0,56871,58515,
#Partially deleted in new
chr12	65523262	65538699	chr12:65523262-65538699	0	-	65523262	65523262	8553170	2	504,16,	0,15421,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	65544237	65557311	chr12:65544237-65557311	0	-	65544237	65544237	789624	3	254,240,231,	0,12520,12843,
#Partially deleted in new
chr12	65558430	65642372	chr12:65558430-65642372	1	-	65558430	65558430	8553170	4	384,78,58,334,	0,3433,11560,83608,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	65559590	65560889	chr12:65559590-65560889	3	+	65559590	65559590	8553170	2	139,304,	0,995,
#Partially deleted in new
chr12	65602868	65606503	chr12:65602868-65606503	1	+	65602868	65602868	8553170	2	113,476,	0,3159,
#Partially deleted in new
chr12	65602877	65612997	chr12:65602877-65612997	3	+	65602877	65602877	789624	3	104,202,306,	0,3150,9814,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	65608470	65613229	chr12:65608470-65613229	1	-	65608470	65608470	8553170	2	823,51,	0,4708,
#Partially deleted in new
chr12	65644333	65663299	chr12:65644333-65663299	3	+	65644333	65644333	8553170	3	148,306,91,	0,3060,18875,
#Partially deleted in new
chr12	65644396	65647855	chr12:65644396-65647855	0	+	65644396	65644396	8553170	2	85,462,	0,2997,
#Partially deleted in new
chr12	65645991	65646462	chr12:65645991-65646462	7	-	65645991	65645991	16724991	1	471,	0,
#Partially deleted in new
chr12	65758019	65826974	chr12:65758019-65826974	7	-	65758019	65758019	16724991	2	1012,132,	0,68823,
#Deleted in new
chr12	65758120	65758998	chr12:65758120-65758998	5	-	65758120	65758120	16724991	1	878,	0,
#Partially deleted in new
chr12	65824130	65966295	chr12:65824130-65966295	3	+	65825270	65963292	789624	5	1251,87,51,33,3051,	0,3870,14388,127252,139114,
#Partially deleted in new
chr12	65824459	65915527	chr12:65824459-65915527	1	+	65825270	65915130	789624	4	922,87,51,469,	0,3541,14059,90599,
#Partially deleted in new
chr12	65824459	65843523	chr12:65824459-65843523	1	+	65825270	65842614	789624	4	922,87,51,933,	0,3541,14059,18131,
#Partially deleted in new
chr12	65824459	65882126	chr12:65824459-65882126	1	+	65825270	65881772	789624	4	922,87,51,384,	0,3541,14059,57283,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	65824459	65915447	chr12:65824459-65915447	1	+	65825270	65914914	789624	4	922,87,51,728,	0,3541,14059,90260,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	65824459	65842917	chr12:65824459-65842917	0	+	65825270	65842196	789624	5	922,87,51,121,327,	0,3541,14059,17674,18131,
#Partially deleted in new
chr12	65824459	65881890	chr12:65824459-65881890	0	+	65825270	65867500	789624	5	922,87,51,319,148,	0,3541,14059,43029,57283,
#Partially deleted in new
chr12	65824810	65829013	chr12:65824810-65829013	0	+	65824810	65824810	8553170	2	571,1013,	0,3190,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	65824897	65958854	chr12:65824897-65958854	1	+	65825270	65951433	789624	4	484,87,51,7472,	0,3103,13621,126485,
#Partially deleted in new
chr12	65825122	65952536	chr12:65825122-65952536	1	+	65825270	65952430	789624	5	259,87,51,33,181,	0,2878,13396,126260,127233,
#Deleted in new
chr12	65825974	65826997	chr12:65825974-65826997	5	-	65825974	65825974	16724991	1	1023,	0,
#Partially deleted in new
chr12	65828000	65963410	chr12:65828000-65963410	0	+	65828000	65881772	789624	5	87,51,148,33,166,	0,10518,53742,123382,135244,
#Deleted in new
chr12	65830749	65831050	chr12:65830749-65831050	3	+	65830749	65830749	8553170	1	301,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	65851339	65882167	chr12:65851339-65882167	0	-	65851339	65851339	8553170	3	313,151,450,	0,15464,30378,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	65855946	65882041	chr12:65855946-65882041	3	-	65855946	65855946	8553170	3	4142,151,324,	0,10857,25771,
#Partially deleted in new
chr12	65866803	65881578	chr12:65866803-65881578	0	-	65866803	65866803	8553170	3	151,258,341,	0,10071,14434,
#Partially deleted in new
chr12	65873811	65881578	chr12:65873811-65881578	1	-	65873811	65873811	789624	3	378,258,341,	0,3063,7426,
#Partially deleted in new
chr12	65934776	65948479	chr12:65934776-65948479	3	-	65934776	65934776	8553170	3	353,56,45,	0,7861,13658,
#Deleted in new
chr12	66023619	66023726	chr12:66023619-66023726	3	-	66023619	66023619	5263520	1	107,	0,
#Partially deleted in new
chr12	66027724	66031066	chr12:66027724-66031066	3	-	66027724	66027724	789624	3	158,112,106,	0,863,3236,
#Deleted in new
chr12	66037234	66037714	chr12:66037234-66037714	7	+	66037234	66037234	16724991	1	480,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	66066220	66066338	chr12:66066220-66066338	7	+	66066220	66066220	16724991	1	118,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	66116554	66130768	chr12:66116554-66130768	3	-	66123839	66129106	789624	3	7464,218,64,	0,12341,14150,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	66123306	66130702	chr12:66123306-66130702	1	-	66123839	66129106	789624	3	712,218,247,	0,5589,7149,
#Partially deleted in new
chr12	66123916	66169985	chr12:66123916-66169985	3	-	66138086	66169951	789624	8	102,218,166,118,34,106,109,131,	0,4979,14047,21924,23991,28354,29423,45938,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	66130750	66134449	chr12:66130750-66134449	3	+	66130750	66130750	789624	2	225,398,	0,3301,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	66135845	66170072	chr12:66135845-66170072	3	-	66137959	66169951	789624	7	2321,46,118,34,106,109,218,	0,2878,9995,12062,16425,17494,34009,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	66136936	66169511	chr12:66136936-66169511	1	-	66137959	66138145	789624	7	1230,46,118,34,106,109,597,	0,1787,8904,10971,15334,16403,31978,
#Deleted in new
chr12	66137828	66138937	chr12:66137828-66138937	0	-	66137828	66137828	8553170	2	338,214,	0,895,
#Partially deleted in new
chr12	66137833	66169998	chr12:66137833-66169998	1	-	66138144	66169951	789624	6	333,118,34,106,109,144,	0,8007,10074,14437,15506,32021,
#Partially deleted in new
chr12	66137833	66169963	chr12:66137833-66169963	1	-	66138039	66169951	789624	9	221,110,19,25,118,34,106,109,109,	0,222,890,911,8007,10074,14437,15506,32021,
#Partially deleted in new
chr12	66137838	66170027	chr12:66137838-66170027	0	-	66153366	66169951	789624	7	328,46,118,34,106,71,173,	0,885,8002,10069,14432,15501,32016,
#Partially deleted in new
chr12	66137839	66169962	chr12:66137839-66169962	1	-	66137959	66169951	789624	8	327,46,118,34,106,109,141,108,	0,884,8001,10068,14431,15500,22325,32015,
#Partially deleted in new
chr12	66137841	66169980	chr12:66137841-66169980	0	-	66169318	66169951	789624	8	325,46,118,34,106,109,439,126,	0,882,7999,10066,14429,15498,31073,32013,
#Partially deleted in new
chr12	66137919	66169999	chr12:66137919-66169999	1	-	66138152	66169951	789624	7	247,11,118,34,106,109,145,	0,804,7921,9988,14351,15420,31935,
#Partially deleted in new
chr12	66138105	66170004	chr12:66138105-66170004	0	-	66145945	66169951	789624	5	61,46,118,34,150,	0,618,7735,9802,31749,
#Partially deleted in new
chr12	66138744	66169969	chr12:66138744-66169969	0	-	66169318	66169951	789624	7	25,118,34,106,109,64,115,	0,7096,9163,13526,14595,30545,31110,
#Partially deleted in new
chr12	66144748	66170072	chr12:66144748-66170072	1	-	66144748	66169951	789624	7	18,7,118,34,106,109,218,	0,606,1092,3159,7522,8591,25106,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	66161087	66169989	chr12:66161087-66169989	0	-	66161087	66161087	8553170	2	85,135,	0,8767,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	66168745	66170012	chr12:66168745-66170012	1	-	66169318	66169951	789624	2	608,158,	0,1109,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	66188878	66254622	chr12:66188878-66254622	3	+	66189299	66248171	0	12	554,183,65,55,152,65,115,119,199,63,165,6928,	0,14832,20577,21268,22567,28292,37844,39373,55607,56069,56219,58816,
#Partially deleted in new
chr12	66189194	66198220	chr12:66189194-66198220	1	+	66189299	66197028	789624	2	238,1341,	0,7685,
#Partially deleted in new
chr12	66189256	66248373	chr12:66189256-66248373	1	+	66189299	66248171	0	11	176,65,55,152,65,115,119,199,63,165,679,	0,20199,20890,22189,27914,37466,38995,55229,55691,55841,58438,
#Deleted in new
chr12	66234078	66235234	chr12:66234078-66235234	7	-	66234078	66234078	16724991	1	1156,	0,
#Deleted in new
chr12	66251081	66251157	chr12:66251081-66251157	3	+	66251081	66251081	5263520	1	76,	0,
#Partially deleted in new
chr12	66251744	66257434	chr12:66251744-66257434	3	-	66251744	66251744	8553170	4	169,75,103,176,	0,564,2998,5514,
#Partially deleted in new
chr12	66275939	66276651	chr12:66275939-66276651	7	-	66275939	66275939	16724991	1	712,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	66292682	66292987	chr12:66292682-66292987	3	+	66292682	66292682	8553170	1	305,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	66302544	66347645	chr12:66302544-66347645	3	+	66302603	66338102	789624	13	246,420,170,903,178,142,155,82,60,229,144,492,9645,	0,2186,3800,7161,11441,12697,16093,19403,20179,21438,22438,28609,35456,
#Partially deleted in new
chr12	66302578	66338158	chr12:66302578-66338158	0	+	66302603	66315286	789624	12	212,420,170,903,142,155,82,60,229,144,492,158,	0,2152,3766,7127,12663,16059,19369,20145,21404,22404,28575,35422,
#Partially deleted in new
chr12	66302578	66338169	chr12:66302578-66338169	0	+	66302603	66324921	789624	13	212,420,170,903,178,142,155,82,60,229,220,492,169,	0,2152,3766,7127,11407,12663,16059,19369,20145,21404,22328,28575,35422,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	66302579	66343643	chr12:66302579-66343643	0	+	66302603	66338102	789624	14	211,420,170,903,178,142,155,82,60,229,144,492,212,188,	0,2151,3765,7126,11406,12662,16058,19368,20144,21403,22403,28574,35421,40876,
#Partially deleted in new
chr12	66321401	66325078	chr12:66321401-66325078	0	+	66321401	66321401	8553170	4	628,60,229,96,	0,1322,2581,3581,
#Partially deleted in new
chr12	66322739	66324519	chr12:66322739-66324519	0	+	66322739	66322739	8553170	2	44,537,	0,1243,
#Partially deleted in new
chr12	66347430	66679145	chr12:66347430-66679145	1	-	66349018	66678904	0	25	1816,147,234,45,112,157,195,140,145,146,70,81,146,187,156,156,170,148,146,76,84,146,136,81,296,	0,5986,24263,29586,29743,31849,44877,45246,46777,58852,73289,85117,97153,97891,107978,108756,115493,117844,168188,170470,182400,191647,194384,249416,331419,
#Partially deleted in new
chr12	66347430	66678973	chr12:66347430-66678973	1	-	66349018	66678904	0	24	1816,147,234,45,112,157,195,140,145,146,70,81,146,187,156,170,148,146,76,84,146,136,81,124,	0,5986,24263,29586,29743,31849,44877,45246,46777,58852,73289,85117,97153,97891,107978,115493,117844,168188,170470,182400,191647,194384,249416,331419,
#Partially deleted in new
chr12	66348824	66517922	chr12:66348824-66517922	0	-	66349018	66517922	789624	19	422,147,234,112,157,195,140,145,146,70,81,146,187,156,156,170,148,146,22,	0,4592,22869,28349,30455,43483,43852,45383,57458,71895,83723,95759,96497,106584,107362,114099,116450,166794,169076,
#Partially deleted in new
chr12	66348826	66539108	chr12:66348826-66539108	0	-	66349217	66539108	789624	5	420,146,76,84,31,	0,166792,169074,181004,190251,
#Partially deleted in new
chr12	66349035	66679145	chr12:66349035-66679145	0	-	66349035	66678904	789624	23	211,147,234,112,157,195,140,145,146,70,81,146,187,156,170,148,146,76,84,146,136,81,296,	0,4381,22658,28138,30244,43272,43641,45172,57247,71684,83512,95548,96286,106373,113888,116239,166583,168865,180795,190042,192779,247811,329814,
#Partially deleted in new
chr12	66349178	66372341	chr12:66349178-66372341	0	-	66349178	66349178	8553170	3	68,147,648,	0,4238,22515,
#Partially deleted in new
chr12	66371753	66804114	chr12:66371753-66804114	0	-	66371753	66541918	789624	21	174,45,112,157,195,140,145,146,70,81,146,187,156,170,148,146,76,84,146,136,183,	0,5263,5420,7526,20554,20923,22454,34529,48966,60794,72830,73568,83655,91170,93521,143865,146147,158077,167324,170061,432178,
#Partially deleted in new
chr12	66371818	66571058	chr12:66371818-66571058	0	-	66371818	66541918	789624	19	109,112,157,195,140,145,146,70,81,146,187,170,148,146,76,84,146,136,97,	0,5355,7461,20489,20858,22389,34464,48901,60729,72765,73503,91105,93456,143800,146082,158012,167259,169996,199143,
#Partially deleted in new
chr12	66371863	66392532	chr12:66371863-66392532	0	-	66371863	66371863	8553170	4	64,112,157,225,	0,5310,7416,20444,
#Partially deleted in new
chr12	66394327	66407431	chr12:66394327-66407431	0	-	66394327	66394327	8553170	3	25,146,29,	0,11955,13075,
#Partially deleted in new
chr12	66444724	66517939	chr12:66444724-66517939	0	-	66444724	66517939	789624	7	5,187,153,170,148,146,39,	0,597,10684,18199,20550,70894,73176,
#Partially deleted in new
chr12	66445395	66465422	chr12:66445395-66465422	0	-	66456257	66465422	789624	4	113,156,156,148,	0,10013,10791,19879,
#Partially deleted in new
chr12	66515629	66678934	chr12:66515629-66678934	0	-	66515629	66678904	789624	6	135,76,84,146,136,85,	0,2271,14201,23448,26185,163220,
#Partially deleted in new
chr12	66515726	66647349	chr12:66515726-66647349	0	-	66515726	66541918	789624	7	38,76,84,146,136,81,31,	0,2174,14104,23351,26088,81120,131592,
#Partially deleted in new
chr12	66517948	66803980	chr12:66517948-66803980	0	-	66517948	66541918	789624	6	28,84,146,136,81,49,	0,11882,21129,23866,78898,285983,
#Partially deleted in new
chr12	66529844	66804186	chr12:66529844-66804186	0	-	66529844	66804185	789624	5	70,146,136,81,134,	0,9233,11970,67002,274208,
#Deleted in new
chr12	66563523	66563694	chr12:66563523-66563694	7	+	66563523	66563523	16724991	1	171,	0,
#Partially deleted in new
chr12	66563966	66569194	chr12:66563966-66569194	7	-	66563966	66563966	16724991	2	170,1630,	0,3598,
#Partially deleted in new
chr12	66596846	67069162	chr12:66596846-67069162	2	-	66596846	67069107	789624	2	81,113,	0,472203,
#Partially deleted in new
chr12	66891875	67069162	chr12:66891875-67069162	0	-	66891875	66891875	8553170	2	79,113,	0,177174,
#Partially deleted in new
chr12	67035507	67096406	chr12:67035507-67096406	1	-	67035507	67035507	8553170	5	156,108,82,128,301,	0,1877,56039,59222,60598,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	67065017	67065278	chr12:67065017-67065278	3	-	67065017	67065017	8553170	1	261,	0,
#Partially deleted in new
chr12	67077625	67096284	chr12:67077625-67096284	3	-	67077625	67077625	789624	4	119,82,128,179,	0,13921,17104,18480,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	67086777	67095554	chr12:67086777-67095554	0	-	67086777	67086777	8553170	4	171,82,128,28,	0,4769,7952,8749,
#Deleted in new
chr12	67131566	67132205	chr12:67131566-67132205	7	-	67131566	67131566	16724991	1	639,	0,
#Deleted in new
chr12	67265841	67266966	chr12:67265841-67266966	7	-	67265841	67265841	16724991	1	1125,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	67269280	67319951	chr12:67269280-67319951	3	+	67269717	67312830	0	15	505,144,155,124,257,106,146,293,142,1494,96,170,165,108,7346,	0,12629,23341,25752,28126,28467,29669,33042,35324,35823,38116,40620,40871,42412,43325,
#Partially deleted in new
chr12	67269389	67282176	chr12:67269389-67282176	0	+	67269389	67269389	8553170	2	396,267,	0,12520,
#Deleted in new
chr12	67269717	67270795	chr12:67269717-67270795	0	+	67269717	67269717	8553170	2	68,365,	0,713,
#Partially deleted in new
chr12	67269725	67293189	chr12:67269725-67293189	0	+	67269725	67269725	8553170	3	60,144,568,	0,12184,22896,
#Partially deleted in new
chr12	67269900	67292644	chr12:67269900-67292644	0	+	67281913	67292644	789624	3	360,144,23,	0,12009,22721,
#Partially deleted in new
chr12	67294954	67297848	chr12:67294954-67297848	0	+	67294954	67294954	8553170	3	202,257,101,	0,2452,2793,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	67295019	67311381	chr12:67295019-67311381	0	+	67295019	67307435	789624	10	137,257,106,146,293,142,209,96,170,1230,	0,2387,2728,3930,7303,9585,10084,12377,14881,15132,
#Partially deleted in new
chr12	67298971	67314608	chr12:67298971-67314608	0	+	67298971	67312830	789624	9	124,293,77,1055,96,170,165,108,2003,	0,3351,5633,6571,8425,10929,11180,12721,13634,
#Deleted in new
chr12	67351435	67352039	chr12:67351435-67352039	7	+	67351435	67351435	16724991	1	604,	0,
#Deleted in new
chr12	67424271	67424986	chr12:67424271-67424986	7	-	67424271	67424271	16724991	1	715,	0,
#Deleted in new
chr12	67440997	67442559	chr12:67440997-67442559	3	-	67440997	67440997	789624	2	475,266,	0,1296,
#Partially deleted in new
chr12	67519828	67549163	chr12:67519828-67549163	1	+	67519828	67519828	8553170	3	110,408,41,	0,22298,29294,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	67520081	67567126	chr12:67520081-67567126	1	+	67520081	67520081	789624	3	111,42,1613,	0,29041,45432,
#Partially deleted in new
chr12	67571196	67589987	chr12:67571196-67589987	3	-	67571196	67571196	8553170	3	109,151,122,	0,15959,18669,
#Deleted in new
chr12	67586589	67587306	chr12:67586589-67587306	1	-	67586589	67586589	8553170	2	192,151,	0,566,
#Partially deleted in new
chr12	67648337	67657596	chr12:67648337-67657596	0	+	67657126	67657596	789624	2	77,491,	0,8768,
#Partially deleted in new
chr12	67648720	67665406	chr12:67648720-67665406	3	+	67649133	67658713	0	3	462,149,8301,	0,1076,8385,
#Partially deleted in new
chr12	67648777	67658909	chr12:67648777-67658909	1	+	67657126	67658713	0	2	405,1804,	0,8328,
#Deleted in new
chr12	67649120	67652700	chr12:67649120-67652700	0	+	67649120	67649120	8553170	3	62,149,200,	0,676,3380,
#Partially deleted in new
chr12	67649681	67657407	chr12:67649681-67657407	0	+	67657126	67657407	789624	2	264,302,	0,7424,
#Partially deleted in new
chr12	67651468	67657475	chr12:67651468-67657475	0	+	67651526	67657475	789624	2	190,370,	0,5637,
#Partially deleted in new
chr12	67658990	67670919	chr12:67658990-67670919	3	-	67658990	67658990	8553170	3	594,112,71,	0,8564,11858,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	67709046	67729475	chr12:67709046-67729475	3	-	67709046	67709046	789624	5	1639,882,199,335,80,	0,6275,9296,13332,20349,
#Deleted in new
chr12	67753700	67753817	chr12:67753700-67753817	3	+	67753700	67753700	8553170	1	117,	0,
#Partially deleted in new
chr12	67929234	67932948	chr12:67929234-67932948	1	+	67929234	67929234	8553170	3	153,113,243,	0,3042,3471,
#Partially deleted in new
chr12	67929262	67970017	chr12:67929262-67970017	3	+	67929262	67929262	789624	3	125,113,206,	0,3014,40549,
#Deleted in new
chr12	67978106	67978387	chr12:67978106-67978387	7	-	67978106	67978106	16724991	1	281,	0,
#Partially deleted in new
chr12	67989444	68021327	chr12:67989444-68021327	1	+	67989444	67989444	789624	4	135,133,57,1466,	0,6496,16645,30417,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	67989455	68020331	chr12:67989455-68020331	1	+	67989455	67989455	789624	5	124,133,57,118,470,	0,6485,16634,24075,30406,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	67989528	68234686	chr12:67989528-68234686	3	+	67989528	67989528	8553170	6	51,133,57,37,58,158,	0,6412,16561,30333,37122,245000,
#Deleted in new
chr12	68001393	68001548	chr12:68001393-68001548	7	-	68001393	68001393	16724991	1	155,	0,
#Deleted in new
chr12	68035766	68036853	chr12:68035766-68036853	7	+	68035766	68035766	16724991	1	1087,	0,
#Deleted in new
chr12	68143317	68143690	chr12:68143317-68143690	7	+	68143317	68143317	16724991	1	373,	0,
#Partially deleted in new
chr12	68154767	68159747	chr12:68154767-68159747	3	-	68155352	68159615	0	4	720,183,69,246,	0,3145,3423,4734,
#Partially deleted in new
chr12	68201350	68225821	chr12:68201350-68225821	3	-	68201844	68225756	789624	5	581,66,135,57,236,	0,667,23798,24093,24235,
#Partially deleted in new
chr12	68248241	68253604	chr12:68248241-68253604	3	-	68248798	68253448	0	6	635,66,144,66,232,22,	0,3271,4262,4522,5021,5341,
#Partially deleted in new
chr12	68248788	68253502	chr12:68248788-68253502	1	-	68248798	68253448	0	5	88,66,144,66,240,	0,2724,3715,3975,4474,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	68272442	68295323	chr12:68272442-68295323	0	-	68280722	68295323	789624	4	90,136,108,59,	0,5181,8205,22822,
#Partially deleted in new
chr12	68294567	68332332	chr12:68294567-68332332	3	-	68295253	68332245	789624	14	799,60,253,110,110,318,176,100,104,168,135,365,115,105,	0,2355,8052,18875,19076,20380,21510,26779,26957,28505,30873,32089,36539,37660,
#Partially deleted in new
chr12	68294567	68332286	chr12:68294567-68332286	0	-	68325567	68332245	789624	13	799,60,253,110,110,318,176,100,104,168,135,115,59,	0,2355,8052,18875,19076,20380,21510,26779,26957,28505,30873,36539,37660,
#Partially deleted in new
chr12	68294814	68302872	chr12:68294814-68302872	0	-	68295253	68302872	789624	2	552,253,	0,7805,
#Partially deleted in new
chr12	68294862	68332286	chr12:68294862-68332286	1	-	68295253	68332245	789624	14	504,60,253,110,110,318,176,30,100,104,168,365,115,59,	0,2060,7757,18580,18781,20085,21215,21718,26484,26662,28210,31794,36244,37365,
#Partially deleted in new
chr12	68302802	68316396	chr12:68302802-68316396	0	-	68302802	68302802	8553170	5	70,110,110,274,319,	0,10640,10841,12145,13275,
#Deleted in new
chr12	68315015	68316408	chr12:68315015-68316408	0	-	68315015	68315015	8553170	2	250,331,	0,1062,
#Partially deleted in new
chr12	68320972	68323212	chr12:68320972-68323212	0	-	68320972	68320972	8553170	3	474,104,140,	0,552,2100,
#Partially deleted in new
chr12	68321372	68323398	chr12:68321372-68323398	0	-	68321372	68321372	8553170	2	256,326,	0,1700,
#Partially deleted in new
chr12	68321551	68326110	chr12:68321551-68326110	0	-	68321551	68321551	8553170	4	77,168,135,206,	0,1521,3889,4353,
#Partially deleted in new
chr12	68321573	68332036	chr12:68321573-68332036	0	-	68321573	68332003	789624	6	55,168,135,365,115,36,	0,1499,3867,5083,9533,10427,
#Partially deleted in new
chr12	68325004	68332324	chr12:68325004-68332324	1	-	68327433	68332245	789624	3	2506,115,97,	0,6102,7223,
#Partially deleted in new
chr12	68325120	68332381	chr12:68325120-68332381	1	-	68326485	68332245	789624	3	1901,115,154,	0,5986,7107,
#Partially deleted in new
chr12	68325172	68332257	chr12:68325172-68332257	0	-	68325172	68325172	8553170	5	75,135,365,115,30,	0,268,1484,5934,7055,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	68330695	68332255	chr12:68330695-68332255	0	-	68330695	68330695	8553170	2	526,28,	0,1532,
#Partially deleted in new
chr12	68332887	68335781	chr12:68332887-68335781	1	-	68332887	68332887	8553170	2	777,127,	0,2767,
#Partially deleted in new
chr12	68332947	68403800	chr12:68332947-68403800	1	-	68332947	68332947	8553170	2	717,68,	0,70785,
#Partially deleted in new
chr12	68344663	68349959	chr12:68344663-68349959	3	+	68344663	68344663	8553170	2	240,236,	0,5060,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	68380434	68383605	chr12:68380434-68383605	0	-	68380434	68380434	8553170	2	297,140,	0,3031,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	68426330	68427737	chr12:68426330-68427737	3	-	68426330	68426330	8553170	1	1407,	0,
#Deleted in new
chr12	68431854	68432654	chr12:68431854-68432654	0	-	68431854	68431854	8553170	2	277,140,	0,660,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	68441887	68451663	chr12:68441887-68451663	1	-	68441887	68441887	8553170	2	254,297,	0,9479,
#Deleted in new
chr12	68473740	68474902	chr12:68473740-68474902	7	+	68473740	68473740	16724991	1	1162,	0,
#Deleted in new
chr12	68487686	68487863	chr12:68487686-68487863	7	+	68487686	68487686	16724991	1	177,	0,
#Partially deleted in new
chr12	68552994	68553882	chr12:68552994-68553882	7	-	68552994	68552994	16724991	1	888,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	68575857	68576136	chr12:68575857-68576136	3	-	68575857	68575857	8553170	1	279,	0,
#Duplicated in new
chr12	68610838	68671901	chr12:68610838-68671901	3	+	68648724	68657187	0	8	205,83,69,57,141,144,117,12622,	0,37860,39561,41156,43273,45467,46262,48441,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	68610854	68650882	chr12:68610854-68650882	0	+	68610854	68610854	8553170	3	189,83,483,	0,37844,39545,
#Partially deleted in new
chr12	68610857	68660522	chr12:68610857-68660522	1	+	68648724	68657187	0	8	195,83,69,57,141,144,117,1243,	0,37841,39542,41137,43254,45448,46243,48422,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	68610898	68659283	chr12:68610898-68659283	0	+	68648724	68659283	789624	8	154,203,83,69,57,141,144,4,	0,13772,37800,39501,41096,43213,45407,48381,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	68610898	68650041	chr12:68610898-68650041	0	+	68610898	68610898	8553170	2	145,1343,	0,37800,
#Partially deleted in new
chr12	68610907	68657191	chr12:68610907-68657191	1	+	68648724	68657187	0	7	136,76,69,57,141,144,91,	0,37798,39492,41087,43204,45398,46193,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	68610907	68650440	chr12:68610907-68650440	0	+	68648724	68650440	789624	4	145,199,83,41,	0,13767,37791,39492,
#Partially deleted in new
chr12	68610907	68660124	chr12:68610907-68660124	1	+	68648724	68657187	0	6	136,83,141,144,117,845,	0,37791,43204,45398,46193,48372,
#Partially deleted in new
chr12	68610907	68659497	chr12:68610907-68659497	0	+	68610907	68610907	8553170	6	128,33,141,144,117,218,	0,41111,43204,45398,46193,48372,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	68610907	68648757	chr12:68610907-68648757	0	+	68648724	68648757	789624	3	136,366,59,	0,13600,37791,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	68610907	68659401	chr12:68610907-68659401	1	+	68648724	68657187	0	9	136,203,83,69,57,141,144,117,122,	0,13763,37791,39492,41087,43204,45398,46193,48372,
#Partially deleted in new
chr12	68610917	68657150	chr12:68610917-68657150	0	+	68652021	68657150	789624	6	126,69,57,141,144,50,	0,39482,41077,43194,45388,46183,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	68610918	68654222	chr12:68610918-68654222	0	+	68648724	68654222	789624	6	110,203,83,69,57,111,	0,13752,37780,39481,41076,43193,
#Partially deleted in new
chr12	68610918	68659626	chr12:68610918-68659626	1	+	68654126	68657187	789624	5	125,141,144,117,347,	0,43193,45387,46182,48361,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	68610924	68657713	chr12:68610924-68657713	1	+	68654126	68657187	789624	4	119,141,144,613,	0,43187,45381,46176,
#Partially deleted in new
chr12	68610924	68656364	chr12:68610924-68656364	0	+	68648724	68656364	789624	6	128,76,69,57,141,59,	0,37781,39475,41070,43187,45381,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	68610924	68654190	chr12:68610924-68654190	0	+	68648724	68654190	789624	6	119,199,83,69,57,79,	0,13750,37774,39475,41070,43187,
#Partially deleted in new
chr12	68610924	68659870	chr12:68610924-68659870	1	+	68648724	68657187	0	7	119,83,69,141,144,117,591,	0,37774,39475,43187,45381,46176,48355,
#Partially deleted in new
chr12	68610928	68657139	chr12:68610928-68657139	0	+	68654126	68657139	789624	5	115,83,128,144,39,	0,37770,43196,45377,46172,
#Partially deleted in new
chr12	68610928	68659647	chr12:68610928-68659647	1	+	68648724	68657187	0	6	124,83,141,144,117,368,	0,37770,43183,45377,46172,48351,
#Partially deleted in new
chr12	68610928	68656398	chr12:68610928-68656398	0	+	68648724	68656398	789624	6	128,83,69,57,141,93,	0,37770,39471,41066,43183,45377,
#Partially deleted in new
chr12	68610928	68659754	chr12:68610928-68659754	1	+	68648724	68657187	0	7	115,83,69,57,144,117,475,	0,37770,39471,41066,45377,46172,48351,
#Partially deleted in new
chr12	68610932	68652014	chr12:68610932-68652014	0	+	68648724	68652014	789624	4	111,112,69,20,	0,37737,39467,41062,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	68610937	68652028	chr12:68610937-68652028	0	+	68648724	68652028	789624	6	115,46,203,83,69,34,	0,10508,13733,37761,39462,41057,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	68610937	68648757	chr12:68610937-68648757	0	+	68648724	68648757	789624	4	115,203,103,59,	0,13733,37055,37761,
#Partially deleted in new
chr12	68610938	68659441	chr12:68610938-68659441	1	+	68648724	68657187	789624	7	105,83,69,57,141,117,162,	0,37760,39461,41056,43173,46162,48341,
#Partially deleted in new
chr12	68611024	68656637	chr12:68611024-68656637	1	+	68648724	68656521	789624	6	19,83,69,57,141,332,	0,37674,39375,40970,43087,45281,
#Partially deleted in new
chr12	68626869	68627187	chr12:68626869-68627187	7	-	68626869	68626869	16724991	1	318,	0,
#Partially deleted in new
chr12	68627233	68627375	chr12:68627233-68627375	3	-	68627233	68627233	789624	1	142,	0,
#Deleted in new
chr12	68642518	68642993	chr12:68642518-68642993	7	-	68642518	68642518	16724991	1	475,	0,
#Partially deleted in new
chr12	68650243	68656413	chr12:68650243-68656413	0	+	68650243	68650243	8553170	4	225,57,141,108,	0,1751,3868,6062,
#Partially deleted in new
chr12	68651681	68654219	chr12:68651681-68654219	0	+	68651681	68651681	8553170	2	370,108,	0,2430,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	68674370	68686859	chr12:68674370-68686859	3	-	68674370	68674370	789624	3	1451,159,123,	0,11488,12366,
#Partially deleted in new
chr12	68675349	68687755	chr12:68675349-68687755	1	-	68675349	68675349	8553170	3	472,155,822,	0,10513,11584,
#Partially deleted in new
chr12	68684594	68686308	chr12:68684594-68686308	7	+	68684594	68684594	16724991	3	60,75,544,	0,374,1170,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	68685568	68686837	chr12:68685568-68686837	0	-	68685568	68685568	8553170	2	449,101,	0,1168,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr12	68686733	68745809	chr12:68686733-68745809	3	+	68687065	68742462	0	28	340,92,87,116,145,104,128,49,72,89,79,114,91,77,60,146,49,70,119,39,151,113,103,161,126,114,168,3455,	0,2228,2799,3897,5234,10085,13992,16002,22504,23271,26996,28893,32607,32844,34384,35107,35370,38993,39765,40617,44376,44873,45903,46718,47974,48497,55079,55621,
#Partially deleted in new
chr12	68686950	68742692	chr12:68686950-68742692	1	+	68696823	68742462	0	26	123,92,87,116,145,104,128,49,72,89,79,114,91,77,60,146,49,70,119,39,103,161,126,114,168,338,	0,2011,2582,3680,5017,9868,13775,15785,22287,23054,26779,28676,32390,32627,34167,34890,35153,38776,39548,40400,45686,46501,47757,48280,54862,55404,
#Partially deleted in new
chr12	68686970	68689910	chr12:68686970-68689910	0	+	68686970	68686970	8553170	3	103,92,378,	0,1991,2562,
#Partially deleted in new
chr12	68686991	68700814	chr12:68686991-68700814	0	+	68686991	68686991	8553170	7	82,92,87,116,145,72,89,	0,1970,2541,3639,4976,9859,13734,
#Partially deleted in new
chr12	68686999	68709265	chr12:68686999-68709265	0	+	68686999	68686999	8553170	8	74,92,87,116,145,104,49,28,	0,1962,2533,3631,4968,9819,15736,22238,
#Partially deleted in new
chr12	68687005	68742688	chr12:68687005-68742688	0	+	68687065	68696827	789624	25	68,92,87,116,104,128,49,72,89,79,114,91,77,60,146,49,70,119,39,103,161,126,114,168,334,	0,1956,2527,3625,9813,13720,15730,22232,22999,26724,28621,32335,32572,34112,34835,35098,38721,39493,40345,45631,46446,47702,48225,54807,55349,
#Partially deleted in new
chr12	68687454	68742531	chr12:68687454-68742531	1	+	68689547	68742462	0	28	137,92,87,144,145,104,128,49,72,89,79,114,91,77,60,146,49,70,119,39,151,113,103,161,126,114,168,177,	0,1507,2078,3148,4513,9364,13271,15281,21783,22550,26275,28172,31886,32123,33663,34386,34649,38272,39044,39896,43655,44152,45182,45997,47253,47776,54358,54900,
#Partially deleted in new
chr12	68687461	68696926	chr12:68687461-68696926	0	+	68690743	68696926	789624	6	130,92,87,116,145,108,	0,1500,2071,3169,4506,9357,
#Partially deleted in new
chr12	68690467	68696910	chr12:68690467-68696910	0	+	68690467	68690467	8553170	3	279,145,92,	0,1500,6351,
#Partially deleted in new
chr12	68690670	68692169	chr12:68690670-68692169	0	+	68690670	68690670	8553170	2	76,202,	0,1297,
#Partially deleted in new
chr12	68705633	68707066	chr12:68705633-68707066	7	+	68705633	68705633	16724991	1	1433,	0,
#Partially deleted in new
chr12	68709222	68714378	chr12:68709222-68714378	0	+	68709222	68709222	8553170	3	87,89,649,	0,782,4507,
#Partially deleted in new
chr12	68721135	68733525	chr12:68721135-68733525	0	+	68721135	68726504	789624	9	42,146,49,119,39,151,113,103,74,	0,705,968,5363,6215,9974,10471,11501,12316,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	68732572	68740218	chr12:68732572-68740218	0	+	68732572	68732572	8553170	2	234,495,	0,7151,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	68746105	68781467	chr12:68746105-68781467	3	+	68746377	68764890	789624	5	674,111,159,83,16764,	0,1824,5926,13051,18598,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	68747986	68760196	chr12:68747986-68760196	0	+	68747986	68747986	8553170	4	54,159,83,157,	0,4045,11170,12053,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	68752088	68767245	chr12:68752088-68767245	0	+	68752088	68766897	789624	2	102,624,	0,14533,
#Partially deleted in new
chr12	68752150	68793728	chr12:68752150-68793728	0	+	68752150	68752150	8553170	2	40,441,	0,41137,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	68792411	68793964	chr12:68792411-68793964	0	+	68792411	68792411	8553170	1	1553,	0,
#Deleted in new
chr12	68805010	68805479	chr12:68805010-68805479	7	-	68805010	68805010	16724991	1	469,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	68808175	68850686	chr12:68808175-68850686	1	+	68808477	68839849	0	11	316,85,75,134,50,68,97,161,156,78,11413,	0,1032,5378,8636,12149,16187,16379,20595,27653,28496,31098,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	68808190	68840216	chr12:68808190-68840216	1	+	68809211	68839849	789624	4	301,85,75,943,	0,1017,5363,31083,
#Partially deleted in new
chr12	68808190	68839849	chr12:68808190-68839849	1	+	68809211	68839849	789624	8	301,85,75,134,50,68,97,227,	0,1017,5363,8621,12134,16172,16364,31432,
#Partially deleted in new
chr12	68808272	68839867	chr12:68808272-68839867	0	+	68808477	68824393	789624	10	219,85,75,50,68,97,161,156,78,594,	0,935,5281,12052,16090,16282,20498,27556,28399,31001,
#Partially deleted in new
chr12	68808281	68817018	chr12:68808281-68817018	0	+	68808281	68808281	8553170	4	210,85,75,207,	0,926,5272,8530,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	68808382	68839856	chr12:68808382-68839856	0	+	68809211	68814659	789624	12	109,85,75,87,134,50,68,97,161,156,78,583,	0,825,5171,6220,8429,11942,15980,16172,20388,27446,28289,30891,
#Partially deleted in new
chr12	68808463	68839867	chr12:68808463-68839867	1	+	68808477	68839849	789624	9	28,85,75,134,50,161,156,78,594,	0,744,5090,8348,11861,20307,27365,28208,30810,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	68809001	68840807	chr12:68809001-68840807	3	+	68809211	68839849	0	11	85,85,75,134,50,68,97,161,156,78,1534,	0,206,4552,7810,11323,15361,15553,19769,26827,27670,30272,
#Partially deleted in new
chr12	68809016	68839282	chr12:68809016-68839282	0	+	68809211	68839282	789624	11	70,85,75,134,50,68,97,161,15,78,9,	0,191,4537,7795,11308,15346,15538,19754,26812,27655,30257,
#Partially deleted in new
chr12	68809016	68839314	chr12:68809016-68839314	0	+	68809211	68839314	789624	6	70,85,75,156,78,41,	0,191,4537,26812,27655,30257,
#Partially deleted in new
chr12	68809016	68839314	chr12:68809016-68839314	0	+	68809211	68839314	789624	5	70,85,75,156,41,	0,191,4537,26812,30257,
#Partially deleted in new
chr12	68809211	68839849	chr12:68809211-68839849	1	+	68809211	68839849	0	5	81,75,156,78,576,	0,4342,26617,27460,30062,
#Partially deleted in new
chr12	68809211	68839849	chr12:68809211-68839849	1	+	68809211	68839849	789624	9	81,134,50,68,97,161,156,78,576,	0,7600,11113,15151,15343,19559,26617,27460,30062,
#Partially deleted in new
chr12	68809211	68839849	chr12:68809211-68839849	1	+	68809211	68839849	0	4	81,156,78,576,	0,26617,27460,30062,
#Partially deleted in new
chr12	68809211	68839849	chr12:68809211-68839849	1	+	68809211	68839849	789624	3	81,75,576,	0,4342,30062,
#Partially deleted in new
chr12	68809211	68839849	chr12:68809211-68839849	1	+	68809211	68839849	0	2	81,576,	0,30062,
#Partially deleted in new
chr12	68809211	68839849	chr12:68809211-68839849	0	+	68809211	68824389	789624	6	81,68,97,156,78,576,	0,15151,15343,26617,27460,30062,
#Partially deleted in new
chr12	68809211	68839849	chr12:68809211-68839849	0	+	68809211	68824389	789624	5	81,75,68,97,576,	0,4342,15151,15343,30062,
#Partially deleted in new
chr12	68809211	68839849	chr12:68809211-68839849	1	+	68809211	68839849	789624	3	81,75,237,	0,4342,30401,
#Partially deleted in new
chr12	68809211	68839849	chr12:68809211-68839849	0	+	68809211	68824393	789624	8	81,75,50,68,97,156,78,576,	0,4342,11113,15151,15343,26617,27460,30062,
#Partially deleted in new
chr12	68809211	68839849	chr12:68809211-68839849	0	+	68809211	68824393	789624	6	81,75,50,68,161,576,	0,4342,11113,15151,19559,30062,
#Partially deleted in new
chr12	68809211	68839849	chr12:68809211-68839849	0	+	68809211	68835836	789624	9	81,75,134,50,68,97,156,78,576,	0,4342,7600,11113,15151,15343,26617,27460,30062,
#Partially deleted in new
chr12	68809211	68839849	chr12:68809211-68839849	0	+	68809211	68828869	789624	6	81,75,161,156,78,576,	0,4342,19559,26617,27460,30062,
#Partially deleted in new
chr12	68809211	68839791	chr12:68809211-68839791	1	+	68809211	68839791	789624	4	81,75,27,30,	0,4342,7600,30550,
#Partially deleted in new
chr12	68809211	68839849	chr12:68809211-68839849	1	+	68809211	68839607	789624	2	87,311,	0,30327,
#Partially deleted in new
chr12	68809211	68839849	chr12:68809211-68839849	0	+	68809211	68824393	789624	6	81,75,50,68,14,75,	0,4342,11113,15151,15343,30563,
#Partially deleted in new
chr12	68809226	68839849	chr12:68809226-68839849	1	+	68809226	68839849	789624	3	66,156,576,	0,26602,30047,
#Partially deleted in new
chr12	68809226	68839849	chr12:68809226-68839849	1	+	68809226	68839307	789624	3	66,50,576,	0,11098,30047,
#Partially deleted in new
chr12	68813601	68820414	chr12:68813601-68820414	0	+	68813601	68813601	8553170	3	27,134,90,	0,3210,6723,
#Deleted in new
chr12	68824202	68824758	chr12:68824202-68824758	0	+	68824202	68824202	8553170	2	228,204,	0,352,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	68841287	68843237	chr12:68841287-68843237	3	-	68841287	68841287	8553170	2	401,384,	0,1566,
#Deleted in new
chr12	68841945	68842384	chr12:68841945-68842384	7	+	68841945	68841945	16724991	1	439,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	68842196	68856544	chr12:68842196-68856544	0	-	68856436	68856544	789624	2	133,564,	0,13784,
#Partially deleted in new
chr12	68842207	68870238	chr12:68842207-68870238	0	-	68842266	68870238	789624	6	122,36,149,153,171,24,	0,14436,16715,24688,27117,28007,
#Deleted in new
chr12	68842440	68844181	chr12:68842440-68844181	0	+	68842440	68842440	8553170	2	84,418,	0,1323,
#Deleted in new
chr12	68843065	68844190	chr12:68843065-68844190	0	+	68843065	68843065	8553170	2	199,450,	0,675,
#Deleted in new
chr12	68843688	68844195	chr12:68843688-68844195	0	+	68843688	68843688	8553170	2	144,262,	0,245,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	68851174	68933199	chr12:68851174-68933199	1	-	68856436	68932837	0	9	5505,149,153,171,185,173,98,163,58,	0,7748,15721,18150,19040,20609,34617,81503,81967,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	68851179	68932884	chr12:68851179-68932884	1	-	68856436	68932837	0	8	5500,149,153,171,185,173,98,207,	0,7743,15716,18145,19035,20604,34612,81498,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	68855756	68963269	chr12:68855756-68963269	3	-	68856436	68932837	0	9	923,149,153,171,185,173,98,163,101,	0,3166,11139,13568,14458,16027,30035,76921,107412,
#Partially deleted in new
chr12	68866824	68870382	chr12:68866824-68870382	0	-	68866824	68866824	8553170	3	224,171,168,	0,2500,3390,
#Partially deleted in new
chr12	68869363	68933202	chr12:68869363-68933202	0	-	68869363	68932837	789624	6	132,185,173,98,163,43,	0,851,2420,16428,63314,63796,
#Partially deleted in new
chr12	68869374	68933202	chr12:68869374-68933202	0	-	68871921	68932837	789624	5	121,185,173,163,61,	0,840,2409,63303,63767,
#Partially deleted in new
chr12	68870229	68933199	chr12:68870229-68933199	0	-	68871921	68932837	789624	4	170,173,163,30,	0,1554,62448,62940,
#Partially deleted in new
chr12	68871693	68933171	chr12:68871693-68933171	0	-	68871693	68871693	8553170	4	263,94,163,30,	0,14098,60984,61448,
#Partially deleted in new
chr12	68871805	68933171	chr12:68871805-68933171	0	-	68871805	68932837	789624	4	151,98,163,42,	0,13986,60872,61324,
#Partially deleted in new
chr12	68885827	68933163	chr12:68885827-68933163	0	-	68885827	68932837	789624	3	58,163,22,	0,46850,47314,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	68911920	68911982	chr12:68911920-68911982	3	+	68911920	68911920	8553170	1	62,	0,
#Deleted in new
chr12	68913803	68914022	chr12:68913803-68914022	7	+	68913803	68913803	16724991	1	219,	0,
#Deleted in new
chr12	68957376	68957677	chr12:68957376-68957677	7	-	68957376	68957376	16724991	1	301,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	68957589	68971570	chr12:68957589-68971570	0	-	68957589	68957589	8553170	3	89,132,306,	0,5579,13675,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	69212107	69222849	chr12:69212107-69222849	3	+	69212107	69212107	8553170	4	977,126,118,162,	0,7347,10386,10580,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	69212122	69224242	chr12:69212122-69224242	0	+	69212122	69212122	8553170	4	296,71,118,366,	0,891,10371,11754,
#Partially deleted in new
chr12	69239536	69274358	chr12:69239536-69274358	3	+	69239646	69262559	0	10	170,210,104,146,174,505,116,154,190,4847,	0,11592,13514,17160,18195,19053,19891,20507,22836,29975,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	69239571	69253114	chr12:69239571-69253114	0	+	69239646	69252139	789624	4	135,210,131,64,	0,11557,12514,13479,
#Partially deleted in new
chr12	69239599	69269939	chr12:69239599-69269939	1	+	69239646	69262559	789624	10	107,210,104,146,51,409,116,154,190,428,	0,11529,13451,17097,18132,19086,19828,20444,22773,29912,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	69239599	69274168	chr12:69239599-69274168	0	+	69239646	69255125	8553170	12	107,210,104,1051,146,174,111,505,116,154,190,4657,	0,11529,13451,15402,17097,18132,18435,18990,19828,20444,22773,29912,
#Partially deleted in new
chr12	69239615	69269939	chr12:69239615-69269939	1	+	69239646	69262559	0	11	91,210,104,146,174,111,505,116,154,190,428,	0,11513,13435,17081,18116,18419,18974,19812,20428,22757,29896,
#Partially deleted in new
chr12	69239641	69269573	chr12:69239641-69269573	1	+	69239646	69269515	789624	4	65,13,94,62,	0,11487,22827,29870,
#Partially deleted in new
chr12	69251174	69258189	chr12:69251174-69258189	0	+	69251174	69251174	8553170	4	164,104,146,458,	0,1876,5522,6557,
#Deleted in new
chr12	69273156	69273218	chr12:69273156-69273218	3	-	69273156	69273156	5263520	1	62,	0,
#Deleted in new
chr12	69284396	69285485	chr12:69284396-69285485	7	+	69284396	69284396	16724991	1	1089,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	69326573	69331882	chr12:69326573-69331882	3	-	69326573	69326573	8553170	1	5309,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	69348340	69354234	chr12:69348340-69354234	3	+	69348408	69353219	0	4	204,165,79,1082,	0,1767,3879,4812,
#Partially deleted in new
chr12	69348383	69353495	chr12:69348383-69353495	1	+	69348408	69353265	789624	3	161,165,343,	0,1724,4769,
#Partially deleted in new
chr12	69348385	69350506	chr12:69348385-69350506	1	+	69348408	69350286	789624	2	159,399,	0,1722,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	69353492	69354225	chr12:69353492-69354225	3	-	69353492	69353492	8553170	2	116,483,	0,250,
#Partially deleted in new
chr12	69359702	69390796	chr12:69359702-69390796	3	+	69359972	69390316	0	7	321,120,67,95,93,88,650,	0,3085,5930,6087,11003,11185,30444,
#Partially deleted in new
chr12	69359709	69390631	chr12:69359709-69390631	1	+	69359972	69390316	789624	5	314,120,93,88,485,	0,3078,10996,11178,30437,
#Partially deleted in new
chr12	69359755	69362947	chr12:69359755-69362947	0	+	69359755	69359755	8553170	2	268,160,	0,3032,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	69359778	69370971	chr12:69359778-69370971	0	+	69359972	69370971	789624	7	245,120,123,67,95,93,84,	0,3009,4398,5854,6011,10927,11109,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	69400902	69401200	chr12:69400902-69401200	3	+	69400902	69400902	8553170	1	298,	0,
#Deleted in new
chr12	69422655	69422995	chr12:69422655-69422995	7	+	69422655	69422655	16724991	1	340,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	69470348	69570372	chr12:69470348-69570372	0	+	69569030	69570372	789624	7	182,61,96,43,95,92,42,	0,9950,60516,61665,91831,98656,99982,
#Partially deleted in new
chr12	69470374	69574964	chr12:69470374-69574964	1	+	69569030	69574955	0	9	156,96,43,95,92,187,159,164,960,	0,60490,61639,91805,98630,99956,100901,101743,103630,
#Partially deleted in new
chr12	69470382	69570469	chr12:69470382-69570469	0	+	69570375	69570469	789624	5	148,96,43,95,139,	0,60482,61631,91797,99948,
#Partially deleted in new
chr12	69470382	69570385	chr12:69470382-69570385	0	+	69569030	69570385	789624	7	148,96,43,68,95,92,55,	0,60482,61631,67533,91797,98622,99948,
#Partially deleted in new
chr12	69470405	69579782	chr12:69470405-69579782	3	+	69569030	69574955	0	7	125,95,92,187,159,164,5778,	0,91774,98599,99925,100870,101712,103599,
#Partially deleted in new
chr12	69470407	69571295	chr12:69470407-69571295	0	+	69569030	69571295	789624	9	123,96,43,68,57,95,92,187,20,	0,60457,61606,67508,87392,91772,98597,99923,100868,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	69470419	69570363	chr12:69470419-69570363	0	+	69569030	69570363	789624	7	111,114,96,43,95,92,33,	0,21118,60445,61594,91760,98585,99911,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	69470433	69569061	chr12:69470433-69569061	0	+	69569030	69569061	789624	7	97,114,96,43,68,95,57,	0,21104,60431,61580,67482,91746,98571,
#Partially deleted in new
chr12	69557788	69579789	chr12:69557788-69579789	1	+	69569030	69574955	0	7	68,95,92,187,159,164,5785,	0,4391,11216,12542,13487,14329,16216,
#Partially deleted in new
chr12	69562147	69572256	chr12:69562147-69572256	0	+	69569030	69572256	789624	5	127,92,187,159,139,	0,6857,8183,9128,9970,
#Deleted in new
chr12	69584721	69584823	chr12:69584721-69584823	3	-	69584721	69584721	5263520	1	102,	0,
#Deleted in new
chr12	69584722	69584822	chr12:69584722-69584822	3	+	69584722	69584722	5263520	1	100,	0,
#Partially deleted in new
chr12	69585333	69601570	chr12:69585333-69601570	3	+	69585521	69601325	789624	16	191,75,66,112,77,113,203,101,128,104,120,129,104,100,142,276,	0,936,1419,2171,2596,2816,4151,6725,7642,8176,11822,12304,12634,12988,14529,15961,
#Partially deleted in new
chr12	69585425	69588172	chr12:69585425-69588172	0	+	69585425	69585425	8553170	5	99,75,66,112,243,	0,844,1327,2079,2504,
#Partially deleted in new
chr12	69585458	69587147	chr12:69585458-69587147	0	+	69585458	69585458	8553170	3	66,75,395,	0,811,1294,
#Partially deleted in new
chr12	69585458	69587778	chr12:69585458-69587778	0	+	69585458	69585458	8553170	4	66,75,66,274,	0,811,1294,2046,
#Partially deleted in new
chr12	69585458	69588436	chr12:69585458-69588436	0	+	69585458	69585458	8553170	6	66,75,66,112,77,287,	0,811,1294,2046,2471,2691,
#Partially deleted in new
chr12	69585458	69589751	chr12:69585458-69589751	0	+	69585458	69585458	8553170	7	66,75,66,112,77,113,267,	0,811,1294,2046,2471,2691,4026,
#Partially deleted in new
chr12	69585459	69601525	chr12:69585459-69601525	1	+	69585521	69601452	789624	15	65,75,66,112,77,113,203,101,128,104,120,129,104,100,231,	0,810,1293,2045,2470,2690,4025,6599,7516,8050,11696,12178,12508,12862,15835,
#Partially deleted in new
chr12	69585459	69586925	chr12:69585459-69586925	0	+	69585459	69585459	8553170	4	65,259,75,173,	0,291,810,1293,
#Partially deleted in new
chr12	69585471	69601525	chr12:69585471-69601525	0	+	69585521	69598341	789624	15	53,75,66,112,77,113,203,101,128,104,120,129,100,142,231,	0,798,1281,2033,2458,2678,4013,6587,7504,8038,11684,12166,12850,14391,15823,
#Partially deleted in new
chr12	69585665	69601565	chr12:69585665-69601565	1	+	69586815	69601325	789624	16	344,75,66,112,77,113,203,101,128,104,120,129,104,100,142,271,	0,604,1087,1839,2264,2484,3819,6393,7310,7844,11490,11972,12302,12656,14197,15629,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	69589161	69593606	chr12:69589161-69593606	0	+	69589161	69589161	8553170	4	526,101,128,97,	0,2897,3814,4348,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	69589578	69592313	chr12:69589578-69592313	0	+	69589578	69589578	8553170	2	109,255,	0,2480,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	69592536	69597242	chr12:69592536-69597242	0	+	69592536	69592536	8553170	3	567,104,87,	0,973,4619,
#Partially deleted in new
chr12	69599713	69601570	chr12:69599713-69601570	0	+	69599713	69599713	8553170	2	291,276,	0,1581,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	69608563	69611162	chr12:69608563-69611162	3	-	69610004	69610838	789624	1	2599,	0,
#Partially deleted in new
chr12	69643359	69699364	chr12:69643359-69699364	0	-	69671545	69693770	789624	7	428,139,81,78,155,146,160,	0,28068,29525,33820,35379,50314,55845,
#Partially deleted in new
chr12	69643553	69699361	chr12:69643553-69699361	1	-	69643690	69697798	789624	10	234,152,81,153,78,155,234,95,167,157,	0,27874,29331,33362,33626,35185,50120,50816,54093,55651,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	69653608	69699416	chr12:69653608-69699416	3	-	69654906	69697798	789624	10	2205,152,81,153,78,155,234,95,167,212,	0,17819,19276,23307,23571,25130,40065,40761,44038,45596,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	69653608	69689276	chr12:69653608-69689276	1	-	69654906	69678888	789624	6	2205,152,81,78,155,207,	0,17819,19276,23571,25130,35461,
#Partially deleted in new
chr12	69653818	69699285	chr12:69653818-69699285	1	-	69654906	69693836	789624	8	1995,152,81,153,78,155,234,81,	0,17609,19066,23097,23361,24920,39855,45386,
#Deleted in new
chr12	69660033	69661429	chr12:69660033-69661429	3	-	69660033	69660033	8553170	1	1396,	0,
#Partially deleted in new
chr12	69669678	69699351	chr12:69669678-69699351	1	-	69670445	69678888	789624	7	900,152,81,78,155,179,147,	0,1749,3206,7501,9060,24050,29526,
#Partially deleted in new
chr12	69671572	69694072	chr12:69671572-69694072	0	-	69671572	69693836	789624	5	7,81,78,155,399,	0,1312,5607,7166,22101,
#Partially deleted in new
chr12	69677233	69699335	chr12:69677233-69699335	0	-	69677233	69697798	789624	5	24,155,95,167,131,	0,1505,17136,20413,21971,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	69683238	69699476	chr12:69683238-69699476	1	-	69684552	69693836	789624	3	1370,234,272,	0,10435,15966,
#Partially deleted in new
chr12	69684364	69689211	chr12:69684364-69689211	0	-	69684364	69684364	8553170	2	244,142,	0,4705,
#Partially deleted in new
chr12	69684407	69699395	chr12:69684407-69699395	1	-	69684552	69693836	789624	4	201,234,95,191,	0,9266,9962,14797,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	69687258	69699344	chr12:69687258-69699344	0	-	69687258	69687258	8553170	4	201,234,95,140,	0,6415,7111,11946,
#Partially deleted in new
chr12	69713632	69738568	chr12:69713632-69738568	3	-	69713632	69713632	5263520	4	1955,168,124,291,	0,11589,16940,24645,
#Partially deleted in new
chr12	69722321	69738562	chr12:69722321-69738562	0	-	69722321	69722321	8553170	3	250,168,285,	0,2900,15956,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	69738680	69817377	chr12:69738680-69817377	3	+	69755408	69815446	0	11	351,276,259,96,78,204,129,113,100,70,2014,	0,16703,17724,46039,55756,56460,61528,62928,74097,74283,76683,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	69738861	69796647	chr12:69738861-69796647	1	+	69755408	69795404	0	6	170,276,259,96,78,1507,	0,16522,17543,45858,55575,56279,
#Partially deleted in new
chr12	69738861	69815723	chr12:69738861-69815723	0	+	69755408	69812804	0	9	170,276,259,96,78,204,100,70,360,	0,16522,17543,45858,55575,56279,73916,74102,76502,
#Partially deleted in new
chr12	69738861	69815723	chr12:69738861-69815723	1	+	69755408	69813021	0	10	170,276,259,96,78,204,129,113,70,360,	0,16522,17543,45858,55575,56279,61347,62747,74102,76502,
#Partially deleted in new
chr12	69739108	69756650	chr12:69739108-69756650	0	+	69755408	69756650	789624	3	58,276,246,	0,16275,17296,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	69739389	69823204	chr12:69739389-69823204	1	+	69739846	69815446	0	11	480,276,259,96,78,204,129,113,100,70,7841,	0,15994,17015,45330,55047,55751,60819,62219,73388,73574,75974,
#Partially deleted in new
chr12	69739399	69815723	chr12:69739399-69815723	1	+	69739846	69813021	0	10	470,276,259,96,78,204,129,113,70,360,	0,15984,17005,45320,55037,55741,60809,62209,73564,75964,
#Partially deleted in new
chr12	69739399	69815681	chr12:69739399-69815681	0	+	69739846	69801658	789624	10	470,276,259,96,78,204,124,113,70,318,	0,15984,17005,45320,55037,55741,60809,62209,73564,75964,
#Partially deleted in new
chr12	69739407	69815723	chr12:69739407-69815723	0	+	69739846	69812804	0	9	462,276,259,96,78,204,100,70,360,	0,15976,16997,45312,55029,55733,73370,73556,75956,
#Partially deleted in new
chr12	69755381	69795216	chr12:69755381-69795216	0	+	69755381	69755445	789624	6	97,89,259,96,78,76,	0,189,1023,29338,39055,39759,
#Partially deleted in new
chr12	69756485	69812834	chr12:69756485-69812834	0	+	69756485	69812804	789624	6	178,96,78,204,129,57,	0,28234,37951,38655,43723,56292,
#Partially deleted in new
chr12	69756522	69785016	chr12:69756522-69785016	0	+	69756522	69784854	789624	2	141,297,	0,28197,
#Partially deleted in new
chr12	69795261	69815725	chr12:69795261-69815725	0	+	69795261	69813021	789624	5	83,129,113,256,362,	0,4947,6347,17516,20102,
#Partially deleted in new
chr12	69796572	69815550	chr12:69796572-69815550	1	+	69796634	69815446	789624	6	71,129,113,100,70,187,	0,3636,5036,16205,16391,18791,
#Partially deleted in new
chr12	69801668	69855363	chr12:69801668-69855363	3	+	69801668	69825330	789624	5	53,100,70,241,84,	0,11109,11295,23654,53611,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	69812044	69817377	chr12:69812044-69817377	0	+	69812044	69812044	8553170	2	989,2014,	0,3319,
#Partially deleted in new
chr12	69812710	69815684	chr12:69812710-69815684	0	+	69812710	69812710	8553170	3	167,70,321,	0,253,2653,
#Partially deleted in new
chr12	69825303	69958723	chr12:69825303-69958723	3	+	69825517	69958531	789624	25	260,91,68,259,92,151,196,77,111,91,201,109,110,164,64,86,75,53,180,63,88,75,121,75,279,	0,29976,53724,53891,54897,61516,65667,68460,70067,71852,78340,84665,85517,101267,102381,107209,110809,110979,111149,126809,127495,130059,132518,132945,133141,
#Partially deleted in new
chr12	69825315	69959097	chr12:69825315-69959097	1	+	69825517	69958531	789624	25	248,91,68,259,92,151,196,77,111,91,201,109,110,164,64,86,42,53,180,60,88,75,121,75,653,	0,29964,53712,53879,54885,61504,65655,68448,70055,71840,78328,84653,85505,101255,102369,107197,110830,110967,111137,126800,127483,130047,132506,132933,133129,
#Partially deleted in new
chr12	69904032	70243358	chr12:69904032-70243358	0	-	69904032	69904032	8553170	3	387,97,47,	0,338764,339279,
#Partially deleted in new
chr12	69926574	69958723	chr12:69926574-69958723	0	+	69926574	69958531	789624	12	160,64,86,75,53,180,63,88,75,121,75,279,	0,1110,5938,9538,9708,9878,25538,26224,28788,31247,31674,31870,
#Partially deleted in new
chr12	69932535	69958607	chr12:69932535-69958607	1	+	69932587	69958531	789624	9	63,75,53,180,63,88,121,75,163,	0,3577,3747,3917,19577,20263,25286,25713,25909,
#Partially deleted in new
chr12	69935955	69958598	chr12:69935955-69958598	1	+	69935955	69958531	789624	9	11,75,53,180,63,88,121,75,154,	0,157,327,497,16157,16843,21866,22293,22489,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	69946542	69947081	chr12:69946542-69947081	3	-	69946542	69946542	8553170	2	253,181,	0,358,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	70219131	70221862	chr12:70219131-70221862	3	-	70219131	70219131	8553170	2	466,163,	0,2568,
#Partially deleted in new
chr12	70224992	70243349	chr12:70224992-70243349	3	-	70224992	70224992	789624	5	40,180,97,139,38,	0,218,17804,18073,18319,
#Deleted in new
chr12	70242305	70243360	chr12:70242305-70243360	1	-	70242305	70242305	789624	2	588,295,	0,760,
#Deleted in new
chr12	70242488	70243358	chr12:70242488-70243358	0	-	70242488	70242488	8553170	2	405,47,	0,823,
#Partially deleted in new
chr12	70242993	70354992	chr12:70242993-70354992	3	+	70278226	70353915	0	16	487,143,123,67,148,183,80,126,125,121,157,62,50,101,145,1164,	0,35138,67901,76304,86429,87293,89773,92444,94395,95449,95672,99113,99264,101134,103186,110835,
#Partially deleted in new
chr12	70242993	70338505	chr12:70242993-70338505	0	+	70278226	70338505	789624	10	487,143,123,67,148,183,80,126,125,63,	0,35138,67901,76304,86429,87293,89773,92444,94395,95449,
#Partially deleted in new
chr12	70243001	70310923	chr12:70243001-70310923	0	+	70278226	70310923	789624	4	119,291,143,29,	0,188,35130,67893,
#Partially deleted in new
chr12	70243029	70354993	chr12:70243029-70354993	1	+	70278226	70353915	0	17	208,148,143,123,67,148,183,80,126,125,121,157,62,50,101,145,1165,	0,303,35102,67865,76268,86393,87257,89737,92408,94359,95413,95636,99077,99228,101098,103150,110799,
#Partially deleted in new
chr12	70243409	70330459	chr12:70243409-70330459	0	+	70278226	70310953	789624	7	71,143,58,123,67,148,173,	0,34722,50827,67485,75888,86013,86877,
#Partially deleted in new
chr12	70243411	70342168	chr12:70243411-70342168	0	+	70278226	70342168	789624	9	69,143,123,67,126,125,121,157,62,	0,34720,67483,75886,92026,93977,95031,95254,98695,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	70243423	70294123	chr12:70243423-70294123	0	+	70243423	70243423	8553170	4	57,143,187,53,	0,34708,41976,50647,
#Partially deleted in new
chr12	70243424	70335772	chr12:70243424-70335772	0	+	70243424	70243424	8553170	5	56,143,123,67,335,	0,34707,67470,75873,92013,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr12	70243432	70354993	chr12:70243432-70354993	0	+	70310906	70353915	789624	17	48,143,187,123,67,148,183,80,126,125,121,157,62,50,101,145,1165,	0,34699,41967,67462,75865,85990,86854,89334,92005,93956,95010,95233,98674,98825,100695,102747,110396,
#Partially deleted in new
chr12	70243432	70338755	chr12:70243432-70338755	0	+	70278226	70338755	789624	10	48,143,123,67,148,80,126,125,121,90,	0,34699,67462,75865,85990,89334,92005,93956,95010,95233,
#Partially deleted in new
chr12	70243435	70335503	chr12:70243435-70335503	0	+	70243435	70243435	8553170	5	45,143,123,80,66,	0,34696,67459,89331,92002,
#Partially deleted in new
chr12	70243442	70307901	chr12:70243442-70307901	0	+	70243442	70243442	8553170	4	38,143,58,204,	0,34689,50794,64255,
#Partially deleted in new
chr12	70243444	70278450	chr12:70243444-70278450	0	+	70243444	70243444	8553170	2	36,319,	0,34687,
#Partially deleted in new
chr12	70243447	70329633	chr12:70243447-70329633	0	+	70243447	70243447	8553170	5	33,143,123,67,211,	0,34684,67447,75850,85975,
#Partially deleted in new
chr12	70243448	70319351	chr12:70243448-70319351	0	+	70278226	70294133	789624	5	32,143,224,123,54,	0,34683,50622,67446,75849,
#Partially deleted in new
chr12	70243713	70353913	chr12:70243713-70353913	0	+	70294273	70353913	789624	17	609,143,224,123,67,148,183,80,126,125,121,157,62,50,101,145,85,	0,34418,50357,67181,75584,85709,86573,89053,91724,93675,94729,94952,98393,98544,100414,102466,110115,
#Partially deleted in new
chr12	70243747	70330448	chr12:70243747-70330448	0	+	70278226	70330448	789624	6	442,143,123,67,148,162,	0,34384,67147,75550,85675,86539,
#Partially deleted in new
chr12	70243750	70353913	chr12:70243750-70353913	0	+	70278226	70353913	0	16	572,143,123,67,148,183,80,126,125,121,157,62,50,101,145,85,	0,34381,67144,75547,85672,86536,89016,91687,93638,94692,94915,98356,98507,100377,102429,110078,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	70278131	70319357	chr12:70278131-70319357	0	+	70294273	70319357	789624	5	143,187,58,123,60,	0,7268,16105,32763,41166,
#Partially deleted in new
chr12	70278131	70338568	chr12:70278131-70338568	0	+	70278226	70335455	789624	5	143,123,126,125,126,	0,32763,57306,59257,60311,
#Partially deleted in new
chr12	70278131	70335464	chr12:70278131-70335464	0	+	70278226	70335464	789624	7	143,123,67,148,183,56,27,	0,32763,41166,51291,52155,54659,57306,
#Partially deleted in new
chr12	70278131	70332846	chr12:70278131-70332846	0	+	70329439	70332846	789624	5	143,123,148,183,80,	0,32763,51291,52155,54635,
#Partially deleted in new
chr12	70310962	70331698	chr12:70310962-70331698	0	+	70310962	70330473	789624	4	55,67,148,1412,	0,8335,18460,19324,
#Partially deleted in new
chr12	70319023	70335833	chr12:70319023-70335833	0	+	70319023	70319023	8553170	2	341,396,	0,16414,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	70321541	70324274	chr12:70321541-70324274	3	-	70321541	70321541	8553170	1	2733,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	70321676	70324274	chr12:70321676-70324274	0	-	70321676	70321676	8553170	1	2598,	0,
#Deleted in new
chr12	70327506	70332806	chr12:70327506-70332806	0	+	70327506	70327506	8553170	4	194,148,183,40,	0,1916,2780,5260,
#Deleted in new
chr12	70327506	70335466	chr12:70327506-70335466	0	+	70327506	70327506	8553170	5	209,148,183,80,29,	0,1916,2780,5260,7931,
#Partially deleted in new
chr12	70332397	70338686	chr12:70332397-70338686	0	+	70332397	70332397	8553170	5	449,126,125,121,21,	0,3040,4991,6045,6268,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	70334434	70353937	chr12:70334434-70353937	1	+	70338691	70353915	0	7	4129,157,62,50,101,145,109,	0,4231,7672,7823,9693,11745,19394,
#Partially deleted in new
chr12	70335438	70338718	chr12:70335438-70338718	0	+	70335438	70335438	8553170	5	125,125,65,121,53,	0,1950,2317,3004,3227,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	70337482	70346066	chr12:70337482-70346066	0	+	70337482	70344265	789624	6	31,121,157,62,50,1939,	0,960,1183,4624,4775,6645,
#Partially deleted in new
chr12	70338435	70342373	chr12:70338435-70342373	0	+	70338435	70338435	8553170	3	128,157,267,	0,230,3671,
#Partially deleted in new
chr12	70338473	70353938	chr12:70338473-70353938	0	+	70338473	70346256	789624	7	90,157,62,50,112,145,110,	0,192,3633,3784,5654,7706,15355,
#Partially deleted in new
chr12	70338765	70353913	chr12:70338765-70353913	0	+	70338765	70353856	789624	5	57,62,50,101,85,	0,3341,3492,5362,15063,
#Partially deleted in new
chr12	70341989	70353902	chr12:70341989-70353902	0	+	70341989	70341989	8553170	5	179,50,101,145,74,	0,268,2138,4190,11839,
#Deleted in new
chr12	70342107	70344178	chr12:70342107-70344178	0	+	70342107	70342107	8553170	2	61,51,	0,2020,
#Partially deleted in new
chr12	70342109	70353920	chr12:70342109-70353920	0	+	70342109	70344140	789624	5	59,50,118,145,92,	0,148,2001,4070,11719,
#Partially deleted in new
chr12	70342268	70346626	chr12:70342268-70346626	0	+	70342268	70346354	789624	3	39,101,447,	0,1859,3911,
#Partially deleted in new
chr12	70343946	70353923	chr12:70343946-70353923	0	+	70343946	70343946	8553170	3	282,145,95,	0,2233,9882,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	70347593	70353926	chr12:70347593-70353926	0	+	70347593	70347593	8553170	2	452,98,	0,6235,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	70366275	70434292	chr12:70366275-70434292	3	+	70366734	70430653	789624	3	795,128,3808,	0,33933,64209,
#Partially deleted in new
chr12	70400209	70430686	chr12:70400209-70430686	0	+	70400209	70422713	789624	3	127,143,202,	0,22497,30275,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	70443783	70443923	chr12:70443783-70443923	3	-	70443783	70443783	8553170	1	140,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	70468079	70538060	chr12:70468079-70538060	0	+	70468079	70468079	8553170	6	248,96,69,107,64,11,	0,2133,52119,54444,59595,69970,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	70468084	70543040	chr12:70468084-70543040	3	+	70468084	70468084	8553170	9	243,73,170,43,69,143,107,64,4991,	0,42127,42323,45100,52114,52701,54439,59590,69965,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	70468109	70511222	chr12:70468109-70511222	0	+	70468109	70468109	8553170	5	218,107,73,170,148,	0,39785,42102,42298,42965,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	70468122	70527749	chr12:70468122-70527749	0	+	70468122	70468122	8553170	6	205,107,73,43,69,75,	0,39772,42089,45062,52076,59552,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	70468122	70520839	chr12:70468122-70520839	0	+	70468122	70468122	8553170	6	205,107,73,43,69,54,	0,39772,42089,45062,52076,52663,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	70468194	70538205	chr12:70468194-70538205	0	+	70468194	70468194	8553170	6	133,69,107,67,64,156,	0,52004,54329,57165,59480,69855,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr12	70515865	70637440	chr12:70515865-70637440	3	-	70521488	70637395	0	34	5646,121,136,164,123,135,77,91,82,18,84,100,107,244,150,279,282,264,264,270,264,264,264,264,267,261,270,264,258,279,271,257,396,100,	0,8605,16169,18622,18967,20159,22289,23058,23759,23961,24073,24992,28691,36911,39294,40004,43477,44805,46978,50569,53809,55160,55958,60516,65170,71141,74098,76416,78601,80183,93203,106524,119805,121475,
#Partially deleted in new
chr12	70520190	70538499	chr12:70520190-70538499	0	+	70520190	70520190	8553170	2	77,473,	0,17836,
#Partially deleted in new
chr12	70520205	70538663	chr12:70520205-70538663	0	+	70520205	70520205	8553170	3	62,107,614,	0,2318,17844,
#Partially deleted in new
chr12	70521315	70637421	chr12:70521315-70637421	1	-	70521488	70637395	789624	33	196,121,136,164,123,135,77,91,82,18,84,100,107,244,150,279,282,264,264,270,264,264,264,267,261,270,264,258,279,271,257,396,81,	0,3155,10719,13172,13517,14709,16839,17608,18309,18511,18623,19542,23241,31461,33844,34554,38027,39355,41528,45119,48359,49710,50508,59720,65691,68648,70966,73151,74733,87753,101074,114355,116025,
#Partially deleted in new
chr12	70521402	70609844	chr12:70521402-70609844	1	-	70521488	70609814	0	32	109,121,136,164,123,135,77,91,82,18,84,100,107,244,150,279,282,264,264,270,264,264,264,264,267,261,270,264,258,279,271,84,	0,3068,10632,13085,13430,14622,16752,17521,18222,18424,18536,19455,23154,31374,33757,34467,37940,39268,41441,45032,48272,49623,50421,54979,59633,65604,68561,70879,73064,74646,87666,88358,
#Partially deleted in new
chr12	70521402	70609843	chr12:70521402-70609843	1	-	70521488	70609814	0	31	109,121,136,164,123,135,77,91,82,18,84,100,107,244,150,279,282,264,264,264,264,264,264,267,261,270,264,258,279,271,83,	0,3068,10632,13085,13430,14622,16752,17521,18222,18424,18536,19455,23154,31374,33757,34467,37940,39268,41441,48272,49623,50421,54979,59633,65604,68561,70879,73064,74646,87666,88358,
#Partially deleted in new
chr12	70521402	70609843	chr12:70521402-70609843	1	-	70521488	70609814	0	31	109,121,136,164,123,135,77,91,82,18,84,100,107,244,150,279,282,264,264,270,264,264,264,264,267,261,264,258,279,271,83,	0,3068,10632,13085,13430,14622,16752,17521,18222,18424,18536,19455,23154,31374,33757,34467,37940,39268,41441,45032,48272,49623,50421,54979,59633,65604,70879,73064,74646,87666,88358,
#Deleted in new
chr12	70539413	70540059	chr12:70539413-70540059	0	-	70539413	70539413	8553170	2	431,121,	0,525,
#Partially deleted in new
chr12	70558787	70637420	chr12:70558787-70637420	1	-	70559301	70637395	789624	18	837,264,264,270,264,264,264,264,267,261,270,264,258,279,271,257,393,80,	0,1883,4056,7647,10887,12238,13036,17594,22248,28219,31176,33494,35679,37261,50281,63602,76883,78553,
#Partially deleted in new
chr12	70559472	70637411	chr12:70559472-70637411	0	-	70559472	70637395	789624	18	152,264,264,270,264,264,264,264,267,261,270,264,258,279,271,138,152,71,	0,1198,3371,6962,10202,11553,12351,16909,21563,27534,30491,32809,34994,36576,49596,62917,76442,77868,
#Deleted in new
chr12	70570968	70571440	chr12:70570968-70571440	3	+	70570968	70570968	8553170	1	472,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	70584964	70637414	chr12:70584964-70637414	0	-	70584964	70584964	8553170	10	331,261,270,264,258,279,271,257,396,74,	0,2042,4999,7317,9502,11084,24104,37425,50706,52376,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	70591733	70637440	chr12:70591733-70637440	0	-	70591733	70591733	8553170	7	812,258,279,271,257,396,100,	0,2733,4315,17335,30656,43937,45607,
#Deleted in new
chr12	70608728	70609788	chr12:70608728-70609788	0	-	70609057	70609788	789624	2	611,28,	0,1032,
#Partially deleted in new
chr12	70638072	70754661	chr12:70638072-70754661	1	-	70639183	70754193	0	10	1205,114,158,111,138,80,85,187,269,471,	0,18631,22867,24422,46054,46631,60192,63064,107745,116118,
#Partially deleted in new
chr12	70638073	70754759	chr12:70638073-70754759	1	-	70639183	70754593	0	11	1204,114,158,111,138,80,85,187,269,111,175,	0,18630,22866,24421,46053,46630,60191,63063,107744,116117,116511,
#Partially deleted in new
chr12	70638078	70664677	chr12:70638078-70664677	0	-	70638078	70638078	8553170	5	1199,114,158,111,345,	0,18625,22861,24416,26254,
#Partially deleted in new
chr12	70638078	70754591	chr12:70638078-70754591	0	-	70672844	70698340	789624	11	1199,154,114,158,111,257,138,80,85,269,401,	0,1440,18625,22861,24416,34641,46048,46625,60186,107739,116112,
#Partially deleted in new
chr12	70638081	70920843	chr12:70638081-70920843	3	-	70639183	70920390	0	14	1196,114,158,111,138,80,85,187,269,111,156,114,299,511,	0,18622,22858,24413,46045,46622,60183,63055,107736,116109,123389,126583,254597,282251,
#Partially deleted in new
chr12	70638081	70664372	chr12:70638081-70664372	0	-	70638081	70638081	8553170	5	1196,114,268,111,40,	0,18622,22858,24413,26251,
#Partially deleted in new
chr12	70638930	70788982	chr12:70638930-70788982	1	-	70639183	70788836	0	13	347,114,158,111,138,80,85,187,269,111,156,114,167,	0,17773,22009,23564,45196,45773,59334,62206,106887,115260,122540,125734,149885,
#Partially deleted in new
chr12	70639059	70754716	chr12:70639059-70754716	1	-	70639183	70754193	0	11	218,114,158,111,138,80,85,187,269,111,132,	0,17644,21880,23435,45067,45644,59205,62077,106758,115131,115525,
#Partially deleted in new
chr12	70639129	70684896	chr12:70639129-70684896	0	-	70639129	70639129	8553170	6	148,114,158,111,138,193,	0,17574,21810,23365,44997,45574,
#Partially deleted in new
chr12	70660989	70754759	chr12:70660989-70754759	0	-	70660989	70660989	8553170	9	218,111,138,80,85,187,269,111,175,	0,1505,23137,23714,37275,40147,84828,93201,93595,
#Partially deleted in new
chr12	70671917	70672856	chr12:70671917-70672856	7	+	70671917	70671917	16724991	1	939,	0,
#Partially deleted in new
chr12	70684731	70754735	chr12:70684731-70754735	0	-	70684731	70754193	789624	6	52,85,187,269,111,320,	0,13533,16405,61086,69459,69684,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	70906916	70907018	chr12:70906916-70907018	3	+	70906916	70906916	8553170	1	102,	0,
#Partially deleted in new
chr12	71007772	71032083	chr12:71007772-71032083	3	-	71007772	71007772	8553170	4	268,68,98,107,	0,12925,23836,24204,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	71047401	71118247	chr12:71047401-71118247	3	-	71047401	71047401	8553170	3	278,109,178,	0,68448,70668,
#Partially deleted in new
chr12	71125084	71441898	chr12:71125084-71441898	3	-	71125333	71157678	789624	12	303,84,132,108,75,138,63,169,62,104,120,158,	0,4246,7608,12868,13071,14626,19066,32534,152266,157631,316383,316656,
#Partially deleted in new
chr12	71125099	71158099	chr12:71125099-71158099	1	-	71125333	71157678	789624	9	288,84,132,108,75,138,63,169,170,	0,4231,7593,12853,13056,14611,19051,32519,32830,
#Partially deleted in new
chr12	71125100	71157899	chr12:71125100-71157899	1	-	71125333	71157678	789624	8	287,84,132,108,75,138,63,281,	0,4230,7592,12852,13055,14610,19050,32518,
#Partially deleted in new
chr12	71125152	71139275	chr12:71125152-71139275	0	-	71125152	71125152	8553170	6	235,84,132,108,75,125,	0,4178,7540,12800,13003,13998,
#Partially deleted in new
chr12	71139832	71157973	chr12:71139832-71157973	0	-	71139832	71139832	8553170	5	16,63,106,169,44,	0,4318,17067,17786,18097,
#Deleted in new
chr12	71157230	71157999	chr12:71157230-71157999	0	-	71157230	71157230	8553170	2	557,70,	0,699,
#Partially deleted in new
chr12	71157747	71315756	chr12:71157747-71315756	0	-	71157747	71157747	8553170	4	40,104,65,37,	0,124968,157575,157972,
#Partially deleted in new
chr12	71439769	71586310	chr12:71439769-71586310	3	+	71440080	71584734	0	18	523,72,72,72,216,72,69,72,72,69,72,66,72,72,126,146,84,2664,	0,64844,84636,95345,113303,116849,119816,122011,126634,126862,127071,131744,133080,138155,139034,140508,142686,143877,
#Partially deleted in new
chr12	71439983	71586306	chr12:71439983-71586306	0	+	71439983	71439983	789624	20	309,72,72,72,216,72,69,72,72,69,256,100,66,72,72,126,146,84,266,1812,	0,64630,84422,95131,113089,116635,119602,121797,126420,126648,126857,127232,131530,132866,137941,138820,140294,142472,143663,144511,
#Partially deleted in new
chr12	71440032	71584842	chr12:71440032-71584842	1	+	71440080	71584734	0	17	260,72,72,72,72,69,72,72,69,72,66,72,72,126,146,84,1196,	0,64581,84373,95082,116586,119553,121748,126371,126599,126808,131481,132817,137892,138771,140245,142423,143614,
#Partially deleted in new
chr12	71440034	71584836	chr12:71440034-71584836	1	+	71440080	71584734	0	17	258,72,72,72,216,72,69,72,69,72,66,72,72,126,146,84,1190,	0,64579,84371,95080,113038,116584,119551,126369,126597,126806,131479,132815,137890,138769,140243,142421,143612,
#Deleted in new
chr12	71448404	71448850	chr12:71448404-71448850	3	+	71448404	71448404	8553170	1	446,	0,
#Partially deleted in new
chr12	71567261	71573027	chr12:71567261-71573027	0	+	71567261	71567261	8553170	3	54,66,178,	0,4252,5588,
#Partially deleted in new
chr12	71571263	71578919	chr12:71571263-71578919	0	+	71571263	71571263	8553170	4	316,72,72,116,	0,1586,6661,7540,
#Deleted in new
chr12	71582292	71583852	chr12:71582292-71583852	3	-	71582292	71582292	8553170	3	295,108,124,	0,1162,1436,
#Partially deleted in new
chr12	71609471	71663969	chr12:71609471-71663969	3	-	71610427	71663610	789624	35	1094,63,40,102,101,166,105,111,95,199,106,238,189,187,184,120,102,122,132,110,543,132,175,150,122,138,165,210,98,124,224,199,65,417,957,	0,1223,1586,2314,3863,5063,5362,5734,9843,10454,10738,13888,14632,16788,18279,19446,20137,21128,21351,22306,22500,23414,23792,24683,25232,25971,27018,27378,28946,32964,34623,35405,38277,47413,53541,
#Partially deleted in new
chr12	71609697	71663819	chr12:71609697-71663819	0	-	71611781	71663610	789624	34	868,63,830,101,166,105,111,95,199,106,238,189,187,184,120,102,122,132,110,543,132,175,150,122,138,165,210,98,124,224,199,65,417,807,	0,997,1360,3637,4837,5136,5508,9617,10228,10512,13662,14406,16562,18053,19220,19911,20902,21125,22080,22274,23188,23566,24457,25006,25745,26792,27152,28720,32738,34397,35179,38051,47187,53315,
#Deleted in new
chr12	71610109	71611254	chr12:71610109-71611254	0	-	71610109	71610109	8553170	2	648,197,	0,948,
#Deleted in new
chr12	71610387	71611286	chr12:71610387-71611286	0	-	71610387	71610387	8553170	3	178,63,229,	0,307,670,
#Deleted in new
chr12	71611555	71613748	chr12:71611555-71613748	0	-	71611555	71611555	8553170	2	332,414,	0,1779,
#Deleted in new
chr12	71613366	71615148	chr12:71613366-71615148	0	-	71613366	71613366	8553170	3	69,166,315,	0,1168,1467,
#Partially deleted in new
chr12	71615070	71619965	chr12:71615070-71619965	0	-	71615070	71615070	8553170	3	246,95,40,	0,4244,4855,
#Deleted in new
chr12	71632222	71633091	chr12:71632222-71633091	0	-	71632222	71632222	8553170	2	292,206,	0,663,
#Deleted in new
chr12	71639354	71639483	chr12:71639354-71639483	3	+	71639354	71639354	8553170	1	129,	0,
#Partially deleted in new
chr12	71644913	71667725	chr12:71644913-71667725	0	-	71644913	71644913	8553170	4	162,65,139,205,	0,2835,15375,22607,
#Partially deleted in new
chr12	71656342	71663824	chr12:71656342-71663824	1	-	71656858	71663610	789624	2	959,812,	0,6670,
#Partially deleted in new
chr12	71656342	71663858	chr12:71656342-71663858	1	-	71656501	71663610	789624	3	221,417,846,	0,542,6670,
#Partially deleted in new
chr12	71656882	71663360	chr12:71656882-71663360	0	-	71656882	71656882	8553170	3	419,57,376,	0,3488,6102,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	71663008	71680639	chr12:71663008-71680639	3	+	71664509	71677108	0	3	1572,196,3951,	0,11194,13680,
#Deleted in new
chr12	71664480	71665440	chr12:71664480-71665440	1	+	71664509	71664956	789624	2	100,572,	0,388,
#Partially deleted in new
chr12	71665626	71676968	chr12:71665626-71676968	0	+	71674347	71676968	789624	3	108,196,280,	0,8576,11062,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	71667782	71676941	chr12:71667782-71676941	0	+	71674347	71676941	789624	3	128,196,253,	0,6420,8906,
#Partially deleted in new
chr12	71674203	71698968	chr12:71674203-71698968	3	+	71674203	71689650	789624	5	195,114,138,255,69,	0,15387,22232,23076,24696,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	71686086	71705046	chr12:71686086-71705046	3	+	71686680	71700995	789624	6	724,114,138,255,210,4215,	0,3504,10349,11193,12813,14745,
#Partially deleted in new
chr12	71686113	71697408	chr12:71686113-71697408	0	+	71686680	71697408	789624	5	207,151,114,138,129,	0,546,3477,10322,11166,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	71686495	71699849	chr12:71686495-71699849	1	+	71686680	71699159	789624	5	315,114,138,255,950,	0,3095,9940,10784,12404,
#Partially deleted in new
chr12	71697365	71704056	chr12:71697365-71704056	0	+	71697365	71704051	789624	4	169,210,47,80,	0,1534,3466,6611,
#Partially deleted in new
chr12	71697451	71704056	chr12:71697451-71704056	0	+	71697451	71700995	789624	4	83,210,194,80,	0,1448,3380,6525,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	71709170	71710374	chr12:71709170-71710374	3	-	71709170	71709170	8553170	2	434,143,	0,1061,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	71754873	71800285	chr12:71754873-71800285	3	+	71755129	71785673	0	7	415,60,108,64,55,89,14755,	0,14926,15718,19085,27157,27696,30657,
#Partially deleted in new
chr12	71770535	71785919	chr12:71770535-71785919	0	+	71770535	71770535	8553170	5	164,64,55,89,389,	0,3423,11495,12034,14995,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	71770609	71774300	chr12:71770609-71774300	0	+	71770609	71770609	8553170	2	90,342,	0,3349,
#Partially deleted in new
chr12	71782413	71785689	chr12:71782413-71785689	0	+	71782413	71782413	8553170	2	245,159,	0,3117,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	71793854	71799627	chr12:71793854-71799627	3	-	71793854	71793854	8553170	2	47,1384,	0,4389,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	71835033	71835396	chr12:71835033-71835396	7	-	71835033	71835033	16724991	1	363,	0,
#Partially deleted in new
chr12	71839706	71893324	chr12:71839706-71893324	0	+	71880561	71893324	789624	7	105,131,99,75,139,211,103,	0,1394,32363,33222,40762,45104,53515,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr12	71839717	71927248	chr12:71839717-71927248	3	+	71839781	71923204	789624	18	94,99,75,139,211,103,51,198,129,104,95,117,101,100,98,117,87,4266,	0,32352,33211,40751,45093,53504,54607,54968,56229,56959,58129,67304,74108,77980,78733,81013,81650,83265,
#Partially deleted in new
chr12	71839758	71923223	chr12:71839758-71923223	1	+	71861442	71923204	789624	18	53,92,99,75,139,211,103,198,129,104,95,117,101,100,98,117,87,241,	0,21646,32311,33170,40710,45052,53463,54927,56188,56918,58088,67263,74067,77939,78692,80972,81609,83224,
#Partially deleted in new
chr12	71839758	71923362	chr12:71839758-71923362	0	+	71839781	71893253	789624	16	53,99,75,139,103,198,129,104,95,117,101,100,98,117,87,380,	0,32311,33170,40710,53463,54927,56188,56918,58088,67263,74067,77939,78692,80972,81609,83224,
#Partially deleted in new
chr12	71839758	71894784	chr12:71839758-71894784	0	+	71839781	71884864	789624	6	53,99,75,211,103,99,	0,32311,33170,45052,53463,54927,
#Partially deleted in new
chr12	71839758	71893306	chr12:71839758-71893306	0	+	71839758	71839758	8553170	6	53,131,99,75,139,85,	0,1342,32311,33170,40710,53463,
#Partially deleted in new
chr12	71839758	71923645	chr12:71839758-71923645	1	+	71839781	71923204	789624	17	53,99,75,139,211,103,198,129,104,95,117,101,100,98,117,87,663,	0,32311,33170,40710,45052,53463,54927,56188,56918,58088,67263,74067,77939,78692,80972,81609,83224,
#Partially deleted in new
chr12	71839758	71897889	chr12:71839758-71897889	0	+	71880561	71897889	789624	11	53,69,99,75,139,211,103,198,129,104,43,	0,15026,32311,33170,40710,45052,53463,54927,56188,56918,58088,
#Partially deleted in new
chr12	71839758	71884901	chr12:71839758-71884901	0	+	71839781	71872080	789624	7	53,40,69,99,75,139,91,	0,14804,15026,32311,33170,40710,45052,
#Partially deleted in new
chr12	71839758	71894379	chr12:71839758-71894379	0	+	71839758	71839758	8553170	7	53,69,99,75,139,103,55,	0,15026,32311,33170,40710,53463,54566,
#Partially deleted in new
chr12	71839762	71894722	chr12:71839762-71894722	0	+	71839781	71893236	789624	5	49,99,75,103,37,	0,32307,33166,53459,54923,
#Partially deleted in new
chr12	71839777	71884938	chr12:71839777-71884938	0	+	71839777	71839777	8553170	6	34,131,99,75,139,79,	0,1323,32292,33151,40691,45082,
#Deleted in new
chr12	71849227	71850428	chr12:71849227-71850428	7	-	71849227	71849227	16724991	1	1201,	0,
#Partially deleted in new
chr12	71868801	71884981	chr12:71868801-71884981	0	+	71868801	71868801	8553170	5	120,99,75,139,171,	0,3268,4127,11667,16009,
#Partially deleted in new
chr12	71896387	71917775	chr12:71896387-71917775	0	+	71896387	71896387	8553170	5	393,95,117,101,78,	0,1459,10634,17438,21310,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	71897216	71918497	chr12:71897216-71918497	0	+	71897216	71897216	8553170	7	70,95,117,127,101,100,47,	0,630,9805,10646,16609,20481,21234,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	71897846	71907762	chr12:71897846-71907762	0	+	71897846	71897846	8553170	2	95,741,	0,9175,
#Partially deleted in new
chr12	71913359	71923215	chr12:71913359-71923215	0	+	71913359	71913359	8553170	6	567,100,98,117,87,233,	0,4338,5091,7371,8008,9623,
#Partially deleted in new
chr12	71938845	72032441	chr12:71938845-72032441	3	+	71938986	72031695	0	11	246,150,184,101,68,197,136,127,96,134,921,	0,2738,5448,5740,10742,33673,40106,55593,83553,92412,92675,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	71938976	71965490	chr12:71938976-71965490	0	+	71938976	71938976	8553170	7	115,150,184,101,68,1217,1157,	0,2607,5317,5609,10611,22576,25357,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	72031291	72186618	chr12:72031291-72186618	0	+	72031291	72031291	8553170	4	100,102,117,462,	0,16264,136246,154865,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	72031298	72147834	chr12:72031298-72147834	0	+	72031298	72031298	8553170	4	93,102,105,286,	0,16257,74349,116250,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	72031313	72163152	chr12:72031313-72163152	0	+	72031313	72031313	8553170	6	78,60,102,127,229,177,	0,11511,16242,42279,44166,131662,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	72046148	72057377	chr12:72046148-72057377	3	-	72046148	72046148	8553170	5	357,96,119,120,127,	0,736,1361,6453,11102,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	72087265	72473095	chr12:72087265-72473095	0	+	72087265	72087265	8553170	5	174,105,127,155,29,	0,18382,290729,382492,385801,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	72253507	72258240	chr12:72253507-72258240	0	-	72253507	72253507	8553170	1	4733,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	72253512	72272526	chr12:72253512-72272526	3	-	72253512	72253512	5263520	2	2262,704,	0,18310,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	72255680	72271991	chr12:72255680-72271991	1	-	72255680	72255680	8553170	3	94,140,169,	0,8801,16142,
#Partially deleted in new
chr12	72262546	72274907	chr12:72262546-72274907	1	-	72262546	72262546	8553170	4	2075,340,1181,88,	0,9276,10218,12273,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr12	72272682	72670757	chr12:72272682-72670757	3	+	72272778	72663195	789624	19	875,274,127,155,114,138,66,66,188,89,134,56,148,98,108,168,141,82,7706,	0,13998,105312,197075,200384,226815,269608,289482,290170,295885,302572,302804,346208,348425,348961,379639,380333,384244,390369,
#Partially deleted in new
chr12	72273482	72562953	chr12:72273482-72562953	0	+	72273482	72562953	789624	5	75,274,66,66,101,	0,13198,268808,288682,289370,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	72274508	72309763	chr12:72274508-72309763	0	+	72274508	72274508	8553170	5	78,274,76,83,63,	0,12172,28656,32153,35192,
#Partially deleted in new
chr12	72431721	72432075	chr12:72431721-72432075	7	-	72431721	72431721	16724991	1	354,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	72560538	72618952	chr12:72560538-72618952	0	+	72560538	72560538	8553170	7	217,66,188,89,134,56,62,	0,1626,2314,8029,14716,14948,58352,
#Partially deleted in new
chr12	72562851	72582520	chr12:72562851-72582520	0	+	72562851	72562851	8553170	5	189,89,134,56,294,	0,5716,12403,12635,19375,
#Partially deleted in new
chr12	72568629	72621331	chr12:72568629-72621331	0	+	72568629	72568629	8553170	5	27,134,56,148,224,	0,6625,6857,50261,52478,
#Deleted in new
chr12	72610677	72611316	chr12:72610677-72611316	7	+	72610677	72610677	16724991	1	639,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	72727922	72728844	chr12:72727922-72728844	3	-	72727922	72727922	8553170	2	321,60,	0,862,
#Partially deleted in new
chr12	73115956	73143856	chr12:73115956-73143856	3	-	73115956	73115956	8553170	4	680,127,70,104,	0,11933,13135,27796,
#Partially deleted in new
chr12	73116008	73129162	chr12:73116008-73129162	0	-	73116008	73116008	8553170	3	563,127,71,	0,11881,13083,
#Partially deleted in new
chr12	73116494	73143858	chr12:73116494-73143858	0	-	73116494	73116494	8553170	3	142,70,106,	0,12597,27258,
#Partially deleted in new
chr12	73128984	73143854	chr12:73128984-73143854	0	-	73128984	73128984	8553170	2	177,102,	0,14768,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	73159189	73208317	chr12:73159189-73208317	3	+	73159189	73159189	789624	4	254,40,91,871,	0,4004,47142,48257,
#Partially deleted in new
chr12	73203814	73206835	chr12:73203814-73206835	3	-	73203814	73203814	8553170	2	539,190,	0,2831,
#Partially deleted in new
chr12	73648665	73649039	chr12:73648665-73649039	7	+	73648665	73648665	16724991	1	374,	0,
#Partially deleted in new
chr12	73679187	73679296	chr12:73679187-73679296	3	-	73679187	73679187	8553170	1	109,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	73760688	73798727	chr12:73760688-73798727	3	+	73760688	73760688	8553170	5	72,132,142,63,50,	0,6927,10897,35409,37989,
#Partially deleted in new
chr12	73906939	73919337	chr12:73906939-73919337	3	+	73906939	73906939	8553170	3	135,67,140,	0,7017,12258,
#Partially deleted in new
chr12	74042160	74049981	chr12:74042160-74049981	3	+	74042160	74042160	8553170	4	90,254,176,1489,	0,2756,3497,6332,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	74133165	74292631	chr12:74133165-74292631	3	-	74133165	74133165	5263520	7	51,49,95,80,69,87,317,	0,17836,24624,60908,151859,152694,159149,
#Deleted in new
chr12	74170444	74171830	chr12:74170444-74171830	7	+	74170444	74170444	16724991	1	1386,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	74199571	74292622	chr12:74199571-74292622	1	-	74199571	74199571	8553170	4	502,69,87,308,	0,85453,86288,92743,
#Deleted in new
chr12	74274951	74275231	chr12:74274951-74275231	7	+	74274951	74274951	16724991	1	280,	0,
#Partially deleted in new
chr12	74285697	74292534	chr12:74285697-74292534	1	-	74285697	74285697	8553170	2	249,220,	0,6617,
#Deleted in new
chr12	74292106	74292944	chr12:74292106-74292944	0	-	74292106	74292106	8553170	1	838,	0,
#Deleted in new
chr12	74292323	74293096	chr12:74292323-74293096	7	+	74292323	74292323	16724991	1	773,	0,
#Deleted in new
chr12	74537826	74545430	chr12:74537826-74545430	3	+	74538112	74538406	789624	1	7604,	0,
#Deleted in new
chr12	74538144	74538633	chr12:74538144-74538633	3	-	74538144	74538144	8553170	2	331,44,	0,445,
#Deleted in new
chr12	74656560	74656860	chr12:74656560-74656860	7	+	74656560	74656560	16724991	1	300,	0,
#Deleted in new
chr12	74663773	74664141	chr12:74663773-74664141	7	-	74663773	74663773	16724991	1	368,	0,
#Deleted in new
chr12	74728037	74728851	chr12:74728037-74728851	7	-	74728037	74728037	16724991	1	814,	0,
#Partially deleted in new
chr12	75025973	75044793	chr12:75025973-75044793	1	+	75025973	75025973	8553170	3	231,185,316,	0,14984,18504,
#Partially deleted in new
chr12	75025986	75043370	chr12:75025986-75043370	1	+	75025986	75025986	8553170	2	218,2413,	0,14971,
#Partially deleted in new
chr12	75040076	75208004	chr12:75040076-75208004	1	-	75042312	75207983	789624	5	1130,95,165,928,708,	0,2203,8076,10313,167220,
#Partially deleted in new
chr12	75040076	75208004	chr12:75040076-75208004	1	-	75041096	75207983	789624	4	1130,165,928,708,	0,8076,10313,167220,
#Partially deleted in new
chr12	75040077	75209868	chr12:75040077-75209868	3	-	75043104	75207983	789624	5	3164,165,928,706,662,	0,8075,10312,167219,169129,
#Partially deleted in new
chr12	75040079	75209748	chr12:75040079-75209748	1	-	75042312	75207983	789624	6	1127,95,165,928,706,542,	0,2200,8073,10310,167217,169127,
#Partially deleted in new
chr12	75040108	75209824	chr12:75040108-75209824	0	-	75048197	75207983	8553170	7	1340,95,165,104,928,706,618,	0,2171,8044,9776,10281,167188,169098,
#Partially deleted in new
chr12	75040116	75209731	chr12:75040116-75209731	1	-	75042312	75207983	789624	5	1090,95,928,706,525,	0,2163,10273,167180,169090,
#Partially deleted in new
chr12	75042960	75209459	chr12:75042960-75209459	1	-	75043104	75207983	789624	4	281,928,706,253,	0,7429,164336,166246,
#Partially deleted in new
chr12	75043356	75209435	chr12:75043356-75209435	1	-	75043736	75207983	789624	5	457,165,928,706,229,	0,4796,7033,163940,165850,
#Deleted in new
chr12	75048228	75050927	chr12:75048228-75050927	0	-	75048228	75048228	8553170	2	34,538,	0,2161,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	75051066	75140196	chr12:75051066-75140196	0	-	75051066	75051066	8553170	4	251,103,133,47,	0,72943,73739,89083,
#Partially deleted in new
chr12	75234739	75251865	chr12:75234739-75251865	1	+	75234739	75234739	789624	2	378,1373,	0,15753,
#Partially deleted in new
chr12	75235039	75295112	chr12:75235039-75295112	3	+	75235039	75235039	8553170	5	78,150,70,100,70,	0,15453,23527,25535,60003,
#Deleted in new
chr12	75257634	75258634	chr12:75257634-75258634	7	-	75257634	75257634	16724991	1	1000,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	75275978	75318173	chr12:75275978-75318173	0	-	75275978	75275978	8553170	12	269,97,120,155,77,119,94,75,120,68,151,66,	0,6272,8982,13642,15765,17270,22708,23858,28778,36869,40305,42129,
#Partially deleted in new
chr12	75275978	75330056	chr12:75275978-75330056	1	-	75276242	75329859	789624	18	269,97,120,155,77,119,94,96,75,120,68,123,177,114,46,50,110,225,	0,6272,8982,13642,15765,17270,22708,22892,23858,28778,36869,40333,45421,46995,47198,49260,50439,53853,
#Partially deleted in new
chr12	75275978	75330025	chr12:75275978-75330025	1	-	75276242	75326519	789624	16	269,97,120,155,77,119,94,75,120,68,123,177,46,50,110,159,	0,6272,8982,13642,15765,17270,22708,23858,28778,36869,40333,45421,47198,49260,50439,53888,
#Partially deleted in new
chr12	75277210	75326461	chr12:75277210-75326461	3	-	75278889	75312867	789624	17	1855,97,120,155,77,119,94,96,75,120,68,123,177,114,46,50,44,	0,5040,7750,12410,14533,16038,21476,21660,22626,27546,35637,39101,44189,45763,45966,48028,49207,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr12	75277228	75390922	chr12:75277228-75390922	0	-	75371449	75390870	789624	18	1837,97,120,155,77,119,94,96,75,120,68,151,177,46,50,404,60,85,	0,5022,7732,12392,14515,16020,21458,21642,22608,27528,35619,39055,44171,45948,48010,93850,113093,113609,
#Partially deleted in new
chr12	75277664	75390921	chr12:75277664-75390921	0	-	75312847	75390870	789624	11	1401,97,120,155,77,119,120,68,151,177,84,	0,4586,7296,11956,14079,15584,27092,35183,38619,43735,113173,
#Partially deleted in new
chr12	75295055	75298508	chr12:75295055-75298508	0	+	75295055	75295055	8553170	2	113,309,	0,3144,
#Partially deleted in new
chr12	75299870	75390901	chr12:75299870-75390901	0	-	75299870	75390870	789624	6	41,120,68,123,177,64,	0,4886,12977,16441,21529,90967,
#Partially deleted in new
chr12	75304795	75390901	chr12:75304795-75390901	0	-	75304795	75312867	789624	6	81,68,123,177,46,64,	0,8052,11516,16604,18381,86042,
#Partially deleted in new
chr12	75304869	75390901	chr12:75304869-75390901	0	-	75304869	75325268	789624	7	7,68,123,177,50,110,64,	0,7978,11442,16530,20369,21548,85968,
#Deleted in new
chr12	75305451	75306357	chr12:75305451-75306357	7	+	75305451	75305451	16724991	1	906,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	75321456	75390908	chr12:75321456-75390908	0	-	75321456	75321456	8553170	3	120,404,71,	0,49622,69381,
#Partially deleted in new
chr12	75322935	75330056	chr12:75322935-75330056	0	-	75322935	75322935	8553170	5	152,46,50,110,190,	0,241,2303,3482,6931,
#Deleted in new
chr12	75333797	75334486	chr12:75333797-75334486	3	-	75333797	75333797	8553170	1	689,	0,
#Partially deleted in new
chr12	75334638	75370242	chr12:75334638-75370242	1	+	75334728	75370176	789624	6	264,246,101,89,27,158,	0,9054,12983,28463,35321,35446,
#Partially deleted in new
chr12	75334682	75370560	chr12:75334682-75370560	3	+	75334728	75370176	789624	5	220,246,101,89,476,	0,9010,12939,28419,35402,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	75359883	75390910	chr12:75359883-75390910	0	-	75359883	75359883	8553170	2	1136,73,	0,30954,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	75364808	75390928	chr12:75364808-75390928	0	-	75364808	75364808	8553170	2	455,91,	0,26029,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	75366832	75370387	chr12:75366832-75370387	1	+	75366854	75370099	789624	2	181,303,	0,3252,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	75366936	75370384	chr12:75366936-75370384	0	+	75366936	75370099	789624	3	77,27,300,	0,3023,3148,
#Partially deleted in new
chr12	75391069	75432688	chr12:75391069-75432688	3	+	75391116	75431161	789624	6	281,246,104,86,27,1865,	0,19364,22528,31834,39645,39754,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	75391100	75431883	chr12:75391100-75431883	1	+	75410520	75431161	789624	7	250,130,246,104,86,27,1060,	0,11916,19333,22497,31803,39614,39723,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	75391108	75424040	chr12:75391108-75424040	1	+	75391116	75423081	789624	4	242,246,104,1137,	0,19325,22489,31795,
#Partially deleted in new
chr12	75391116	75422932	chr12:75391116-75422932	1	+	75391116	75422930	789624	3	234,246,29,	0,19317,31787,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	75480679	75503853	chr12:75480679-75503853	3	+	75480880	75498978	0	6	375,246,113,86,27,5030,	0,1154,9726,14897,18014,18144,
#Partially deleted in new
chr12	75480752	75499293	chr12:75480752-75499293	0	+	75480880	75495603	789624	4	302,246,86,600,	0,1081,14824,17941,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	75480880	75498717	chr12:75480880-75498717	0	+	75480880	75498717	789624	6	174,246,71,113,86,24,	0,953,6858,9525,14696,17813,
#Partially deleted in new
chr12	75481203	75495662	chr12:75481203-75495662	0	+	75482011	75495662	789624	4	222,246,113,86,	0,630,9202,14373,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	75483453	75489820	chr12:75483453-75489820	3	-	75483453	75483453	8553170	2	1437,45,	0,6322,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	75490860	75511621	chr12:75490860-75511621	3	-	75499808	75511597	789624	10	9091,94,78,171,57,84,126,135,173,109,	0,10862,11062,13043,14337,15455,15623,15921,17413,20652,
#Partially deleted in new
chr12	75499808	75511597	chr12:75499808-75511597	1	-	75499808	75511597	789624	9	143,94,78,57,84,126,135,173,85,	0,1914,2114,5389,6507,6675,6973,8465,11704,
#Partially deleted in new
chr12	75499829	75504282	chr12:75499829-75504282	0	-	75499829	75499829	8553170	4	122,94,78,379,	0,1893,2093,4074,
#Partially deleted in new
chr12	75506163	75511613	chr12:75506163-75511613	0	-	75506163	75506163	8553170	4	446,135,173,101,	0,618,2110,5349,
#Partially deleted in new
chr12	75506519	75511636	chr12:75506519-75511636	0	-	75506519	75506519	8553170	3	397,173,124,	0,1754,4993,
#Partially deleted in new
chr12	75563201	75984015	chr12:75563201-75984015	3	-	75563201	75563201	8553170	5	199,148,75,31,295,	0,67965,128903,214298,420519,
#Deleted in new
chr12	75600046	75601551	chr12:75600046-75601551	7	+	75600046	75600046	16724991	1	1505,	0,
#Deleted in new
chr12	75688793	75689096	chr12:75688793-75689096	7	-	75688793	75688793	16724991	1	303,	0,
#Deleted in new
chr12	75689151	75689304	chr12:75689151-75689304	3	-	75689151	75689151	8553170	1	153,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	75689494	75692358	chr12:75689494-75692358	1	-	75689494	75689494	8553170	3	113,345,254,	0,1020,2610,
#Deleted in new
chr12	75926212	75926467	chr12:75926212-75926467	7	+	75926212	75926212	16724991	1	255,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	75957832	75958130	chr12:75957832-75958130	3	-	75957832	75957832	8553170	1	298,	0,
#Partially deleted in new
chr12	75964439	75967062	chr12:75964439-75967062	3	+	75964439	75964439	8553170	3	42,133,183,	0,1924,2440,
#Deleted in new
chr12	75964798	75964995	chr12:75964798-75964995	7	+	75964798	75964798	16724991	1	197,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	76025446	76033932	chr12:76025446-76033932	3	-	76030535	76031741	789624	2	4646,3423,	0,5063,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	76025446	76031604	chr12:76025446-76031604	1	-	76030535	76031318	789624	2	4646,1095,	0,5063,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	76025446	76031776	chr12:76025446-76031776	1	-	76030535	76031741	789624	2	4646,1267,	0,5063,
#Deleted in new
chr12	76030493	76031378	chr12:76030493-76031378	3	+	76030493	76030493	8553170	2	101,468,	0,417,
#Deleted in new
chr12	76032657	76033897	chr12:76032657-76033897	3	+	76032657	76032657	8553170	2	145,634,	0,606,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	76036586	76085033	chr12:76036586-76085033	3	-	76048428	76074219	789624	15	11878,51,30,123,20,146,140,72,129,81,142,103,86,37,467,	0,12613,13169,13944,16504,16618,17183,18432,19446,23211,23551,30784,32322,37616,47980,
#Partially deleted in new
chr12	76044901	76084958	chr12:76044901-76084958	1	-	76048428	76074219	789624	16	2817,72,51,30,123,20,146,140,72,129,81,142,103,86,37,392,	0,3491,4298,4854,5629,8189,8303,8868,10117,11131,14896,15236,22469,24007,29301,39665,
#Partially deleted in new
chr12	76046903	76068993	chr12:76046903-76068993	0	-	76048428	76068993	789624	14	815,44,51,30,123,20,146,140,72,129,81,142,103,85,	0,1517,2296,2852,3627,6187,6301,6866,8115,9129,12894,13234,20467,22005,
#Partially deleted in new
chr12	76047154	76084666	chr12:76047154-76084666	1	-	76048428	76074219	789624	16	564,72,51,30,123,20,146,140,72,129,81,142,103,86,37,100,	0,1238,2045,2601,3376,5936,6050,6615,7864,8878,12643,12983,20216,21754,27048,37412,
#Partially deleted in new
chr12	76047594	76084685	chr12:76047594-76084685	1	-	76048428	76067453	789624	13	870,51,30,123,20,146,140,72,129,142,103,86,119,	0,1605,2161,2936,5496,5610,6175,7424,8438,12543,19776,21314,36972,
#Partially deleted in new
chr12	76047595	76067462	chr12:76047595-76067462	0	-	76053103	76067462	789624	12	123,72,51,30,123,20,77,72,126,81,142,92,	0,797,1604,2160,2935,5495,6237,7423,8437,12202,12542,19775,
#Partially deleted in new
chr12	76047631	76084729	chr12:76047631-76084729	1	-	76048428	76074219	789624	13	833,51,30,123,20,146,140,72,129,81,142,37,163,	0,1568,2124,2899,5459,5573,6138,7387,8401,12166,12506,26571,36935,
#Deleted in new
chr12	76047633	76049721	chr12:76047633-76049721	0	-	76047633	76047633	8553170	3	85,72,522,	0,759,1566,
#Partially deleted in new
chr12	76047966	76084731	chr12:76047966-76084731	1	-	76048428	76056041	789624	12	498,51,30,123,20,146,140,72,129,81,142,165,	0,1233,1789,2564,5124,5238,5803,7052,8066,11831,12171,36600,
#Partially deleted in new
chr12	76048029	76084735	chr12:76048029-76084735	1	-	76048428	76067453	789624	14	435,51,30,123,20,146,140,72,126,81,142,103,37,169,	0,1170,1726,2501,5061,5175,5740,6989,8003,11768,12108,19341,26173,36537,
#Partially deleted in new
chr12	76048994	76084612	chr12:76048994-76084612	1	-	76049462	76074219	789624	14	531,30,123,20,146,140,72,129,81,142,103,86,37,46,	0,761,1536,4096,4210,4775,6024,7038,10803,11143,18376,19914,25208,35572,
#Partially deleted in new
chr12	76049145	76084685	chr12:76049145-76084685	1	-	76049737	76074219	789624	13	640,123,20,146,140,72,129,81,142,103,86,37,119,	0,1385,3945,4059,4624,5873,6887,10652,10992,18225,19763,25057,35421,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	76049428	76057885	chr12:76049428-76057885	0	-	76049428	76049428	8553170	8	97,30,123,20,146,140,72,1853,	0,327,1102,3662,3776,4341,5590,6604,
#Partially deleted in new
chr12	76049433	76053158	chr12:76049433-76053158	0	-	76049433	76049433	8553170	3	352,123,68,	0,1097,3657,
#Partially deleted in new
chr12	76049464	76084659	chr12:76049464-76084659	1	-	76049737	76074219	789624	14	321,123,20,146,140,72,129,33,81,142,103,86,37,93,	0,1066,3626,3740,4305,5554,6568,8279,10333,10673,17906,19444,24738,35102,
#Partially deleted in new
chr12	76049561	76067394	chr12:76049561-76067394	0	-	76053103	76067394	789624	9	224,123,20,77,72,129,81,142,24,	0,969,3529,4271,5457,6471,10236,10576,17809,
#Partially deleted in new
chr12	76049588	76084666	chr12:76049588-76084666	1	-	76049737	76067453	789624	12	197,123,20,146,140,72,129,81,142,103,86,100,	0,942,3502,3616,4181,5430,6444,10209,10549,17782,19320,34978,
#Partially deleted in new
chr12	76053327	76084685	chr12:76053327-76084685	0	-	76053327	76074219	789624	9	23,140,72,129,142,103,86,37,119,	0,442,1691,2705,6810,14043,15581,20875,31239,
#Partially deleted in new
chr12	76053328	76084094	chr12:76053328-76084094	0	-	76053328	76074219	789624	10	22,140,72,129,81,142,103,86,37,262,	0,441,1690,2704,6469,6809,14042,15580,20874,30504,
#Partially deleted in new
chr12	76053787	76084735	chr12:76053787-76084735	0	-	76053787	76067453	789624	7	122,72,129,81,142,103,169,	0,1231,2245,6010,6350,13583,30779,
#Partially deleted in new
chr12	76055019	76084685	chr12:76055019-76084685	0	-	76055019	76074219	789624	8	71,129,99,142,103,86,37,119,	0,1013,1554,5118,12351,13889,19183,29547,
#Partially deleted in new
chr12	76055047	76084684	chr12:76055047-76084684	0	-	76055047	76074219	789624	8	43,129,102,142,103,86,37,118,	0,985,4729,5090,12323,13861,19155,29519,
#Partially deleted in new
chr12	76056124	76067570	chr12:76056124-76067570	0	-	76056124	76067453	789624	4	37,81,142,200,	0,3673,4013,11246,
#Deleted in new
chr12	76057537	76058115	chr12:76057537-76058115	7	+	76057537	76057537	16724991	1	578,	0,
#Partially deleted in new
chr12	76059595	76084685	chr12:76059595-76084685	0	-	76059595	76059595	8553170	3	283,142,119,	0,542,24971,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	76059820	76084685	chr12:76059820-76084685	0	-	76059820	76074219	789624	7	58,142,78,103,86,37,119,	0,317,1189,7550,9088,14382,24746,
#Partially deleted in new
chr12	76068577	76084685	chr12:76068577-76084685	0	-	76068577	76068577	8553170	3	417,37,119,	0,5625,15989,
#Partially deleted in new
chr12	76073804	76084683	chr12:76073804-76084683	0	-	76073804	76073804	8553170	2	435,117,	0,10762,
#Deleted in new
chr12	76115710	76116100	chr12:76115710-76116100	7	+	76115710	76115710	16724991	1	390,	0,
#Deleted in new
chr12	76137424	76138610	chr12:76137424-76138610	7	+	76137424	76137424	16724991	1	1186,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	76139566	76139671	chr12:76139566-76139671	3	+	76139566	76139566	8553170	1	105,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	76315750	76316048	chr12:76315750-76316048	3	+	76315750	76315750	8553170	1	298,	0,
#Deleted in new
chr12	76344473	76348442	chr12:76344473-76348442	3	-	76345812	76348358	789624	2	3314,281,	0,3688,
#Deleted in new
chr12	76344505	76348415	chr12:76344505-76348415	1	-	76345812	76348358	8553170	2	3282,254,	0,3656,
#Partially deleted in new
chr12	76351796	76559535	chr12:76351796-76559535	1	-	76355888	76450941	0	26	4225,103,106,88,186,137,90,98,99,97,99,82,185,238,172,85,204,102,78,71,138,109,48,38,30,139,	0,4829,6909,17417,17840,19651,21547,23476,26655,32457,34371,34782,37848,38623,40784,42848,45897,48076,50892,58767,99054,135713,182437,185207,186160,207600,
#Partially deleted in new
chr12	76351799	76559809	chr12:76351799-76559809	3	-	76355888	76487551	0	24	4222,103,106,88,186,137,90,98,99,97,99,82,185,238,172,85,204,102,78,71,138,37,109,413,	0,4826,6906,17414,17837,19648,21544,23473,26652,32454,34368,34779,37845,38620,40781,42845,45894,48073,50889,58764,99051,108059,135710,207597,
#Partially deleted in new
chr12	76351799	76559809	chr12:76351799-76559809	1	-	76355888	76450941	0	24	4222,103,106,88,186,137,90,98,99,97,99,82,185,238,172,85,204,102,78,71,138,37,109,413,	0,4826,6906,17414,17837,19648,21544,23473,26652,32454,34368,34779,37845,38620,40781,42845,45894,48073,50889,58764,99051,108059,135710,207597,
#Partially deleted in new
chr12	76355835	76559809	chr12:76355835-76559809	1	-	76355888	76450941	0	23	186,103,106,88,186,137,90,98,99,97,99,82,185,238,172,85,204,102,78,71,129,109,413,	0,790,2870,13378,13801,15612,17508,19437,22616,28418,30332,30743,33809,34584,36745,38809,41858,44037,46853,54728,95015,131674,203561,
#Partially deleted in new
chr12	76369218	76371862	chr12:76369218-76371862	0	-	76369218	76369218	8553170	3	83,186,415,	0,418,2229,
#Partially deleted in new
chr12	76369712	76559748	chr12:76369712-76559748	0	-	76369712	76487551	789624	20	110,137,90,98,99,97,99,82,185,238,172,85,204,102,78,71,138,37,109,352,	0,1735,3631,5560,8739,14541,16455,16866,19932,20707,22868,24932,27981,30160,32976,40851,81138,90146,117797,189684,
#Partially deleted in new
chr12	76369717	76423266	chr12:76369717-76423266	0	-	76369717	76422652	789624	17	105,137,90,98,99,97,99,82,185,238,172,85,204,102,78,71,756,	0,1730,3626,5555,8734,14536,16450,16861,19927,20702,22863,24927,27976,30155,32971,40846,52793,
#Partially deleted in new
chr12	76371211	76373489	chr12:76371211-76373489	0	-	76371211	76371211	8553170	2	373,146,	0,2132,
#Partially deleted in new
chr12	76386029	76389984	chr12:76386029-76389984	0	-	76386029	76386029	8553170	3	237,82,340,	0,549,3615,
#Partially deleted in new
chr12	76390280	76394737	chr12:76390280-76394737	0	-	76390280	76390280	8553170	3	377,172,93,	0,2300,4364,
#Partially deleted in new
chr12	76397855	76486108	chr12:76397855-76486108	0	-	76397855	76486037	789624	7	42,102,78,71,138,37,74,	0,2017,4833,12708,52995,62003,88179,
#Partially deleted in new
chr12	76399880	76559808	chr12:76399880-76559808	0	-	76399880	76450941	789624	6	94,78,71,138,109,412,	0,2808,10683,50970,87629,159516,
#Partially deleted in new
chr12	76402698	76559712	chr12:76402698-76559712	0	-	76402698	76450941	789624	6	68,71,138,109,30,316,	0,7865,48152,84811,135258,156698,
#Partially deleted in new
chr12	76402723	76559805	chr12:76402723-76559805	0	-	76402723	76487551	789624	3	43,109,409,	0,84786,156673,
#Partially deleted in new
chr12	76402755	76559793	chr12:76402755-76559793	0	-	76402755	76487551	789624	4	11,71,109,397,	0,7808,84754,156641,
#Partially deleted in new
chr12	76450892	76559569	chr12:76450892-76559569	0	-	76450892	76487551	789624	7	96,37,109,48,38,30,173,	0,8966,36617,83341,86111,87064,108504,
#Partially deleted in new
chr12	76450900	76559504	chr12:76450900-76559504	0	-	76450900	76487551	789624	5	79,37,109,30,108,	0,8958,36609,87056,108496,
#Partially deleted in new
chr12	76487549	76559528	chr12:76487549-76559528	0	-	76487549	76487549	8553170	4	69,38,30,132,	0,49454,50407,71847,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	76562293	76615567	chr12:76562293-76615567	3	+	76562293	76562293	8553170	3	65,56,265,	0,8417,53009,
#Deleted in new
chr12	76599670	76600470	chr12:76599670-76600470	7	+	76599670	76599670	16724991	1	800,	0,
#Deleted in new
chr12	76619385	76620043	chr12:76619385-76620043	7	+	76619385	76619385	16724991	1	658,	0,
#Deleted in new
chr12	76660404	76660884	chr12:76660404-76660884	7	+	76660404	76660404	16724991	1	480,	0,
#Partially deleted in new
chr12	76721533	76722286	chr12:76721533-76722286	7	+	76721533	76721533	16724991	1	753,	0,
#Partially deleted in new
chr12	76757190	76757914	chr12:76757190-76757914	7	+	76757190	76757190	16724991	1	724,	0,
#Partially deleted in new
chr12	76763587	76853696	chr12:76763587-76853696	3	+	76764236	76850985	0	17	742,104,123,78,145,65,163,126,143,101,125,63,94,84,158,95,2850,	0,33846,41729,45455,46125,51558,52269,58818,63320,64802,78394,79331,82121,83008,84645,85788,87259,
#Partially deleted in new
chr12	76764102	76827016	chr12:76764102-76827016	0	+	76764236	76805331	789624	9	227,123,78,145,65,163,110,126,109,	0,41214,44940,45610,51043,51754,56955,58303,62805,
#Partially deleted in new
chr12	76764243	76826914	chr12:76764243-76826914	0	+	76764243	76815901	789624	9	86,104,123,78,145,65,122,126,7,	0,33190,41073,44799,45469,50902,51654,58162,62664,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	76764252	76809842	chr12:76764252-76809842	0	+	76764252	76797435	789624	6	77,55,104,123,78,130,	0,17376,33181,41064,44790,45460,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	76764253	76826982	chr12:76764253-76826982	0	+	76781629	76826982	789624	6	76,59,65,163,126,75,	0,17371,50892,51603,58152,62654,
#Partially deleted in new
chr12	76764257	76809793	chr12:76764257-76809793	0	+	76764257	76805331	789624	3	72,123,81,	0,41059,45455,
#Partially deleted in new
chr12	76764297	76822529	chr12:76764297-76822529	0	+	76764297	76805429	789624	7	32,123,78,145,65,163,124,	0,41019,44745,45415,50848,51559,58108,
#Partially deleted in new
chr12	76764572	76809763	chr12:76764572-76809763	0	+	76764788	76809763	789624	5	240,104,123,78,51,	0,32861,40744,44470,45140,
#Partially deleted in new
chr12	76797518	76822490	chr12:76797518-76822490	0	+	76797518	76813414	789624	8	19,123,78,145,137,65,163,85,	0,7798,11524,12194,15794,17627,18338,24887,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	76840058	76842090	chr12:76840058-76842090	0	+	76840058	76840058	8553170	2	425,66,	0,1966,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	76843913	76848337	chr12:76843913-76848337	0	+	76843913	76843913	8553170	3	1889,84,105,	0,2682,4319,
#Partially deleted in new
chr12	76844874	76849466	chr12:76844874-76849466	0	+	76844874	76844874	8553170	5	73,94,84,158,91,	0,834,1721,3358,4501,
#Partially deleted in new
chr12	76846290	76851392	chr12:76846290-76851392	0	+	76846290	76846290	8553170	4	389,158,95,546,	0,1942,3085,4556,
#Partially deleted in new
chr12	76848237	76849669	chr12:76848237-76849669	0	+	76848237	76848237	8553170	2	153,294,	0,1138,
#Partially deleted in new
chr12	76858714	76879060	chr12:76858714-76879060	3	-	76858951	76866260	789624	6	314,94,130,169,113,123,	0,832,1569,4461,7434,20223,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	76858715	76864954	chr12:76858715-76864954	0	-	76858715	76858715	8553170	3	313,94,4671,	0,831,1568,
#Partially deleted in new
chr12	76858828	76878991	chr12:76858828-76878991	1	-	76858951	76866260	789624	7	200,94,130,150,169,113,54,	0,718,1455,3981,4347,7320,20109,
#Partially deleted in new
chr12	76858841	76879023	chr12:76858841-76879023	1	-	76858951	76866260	789624	6	187,94,130,169,113,61,	0,705,1442,4334,7307,20121,
#Partially deleted in new
chr12	76859468	76878985	chr12:76859468-76878985	1	-	76859487	76866260	789624	5	172,130,169,113,48,	0,815,3707,6680,19469,
#Partially deleted in new
chr12	76865668	76878997	chr12:76865668-76878997	0	-	76865668	76865668	8553170	2	593,35,	0,13294,
#Partially deleted in new
chr12	76866104	76878974	chr12:76866104-76878974	0	-	76866104	76866104	8553170	2	157,37,	0,12833,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	76878192	76880352	chr12:76878192-76880352	3	+	76878192	76878192	8553170	2	106,465,	0,1695,
#Deleted in new
chr12	76984078	76984669	chr12:76984078-76984669	7	-	76984078	76984078	16724991	1	591,	0,
#Partially deleted in new
chr12	77021246	77065580	chr12:77021246-77065580	3	-	77024014	77064635	789624	13	2939,425,256,502,73,186,135,159,291,169,276,93,236,	0,4311,6636,8584,11803,12610,21818,23390,24791,29329,34608,43296,44098,
#Partially deleted in new
chr12	77021247	77065563	chr12:77021247-77065563	1	-	77024138	77064635	789624	12	2938,256,502,73,186,135,159,291,169,276,93,219,	0,6635,8583,11802,12609,21817,23389,24790,29328,34607,43295,44097,
#Partially deleted in new
chr12	77027943	77065567	chr12:77027943-77065567	0	-	77027943	77064635	789624	11	195,502,73,186,135,159,291,169,276,93,223,	0,1887,5106,5913,15121,16693,18094,22632,27911,36599,37401,
#Partially deleted in new
chr12	77034005	77050741	chr12:77034005-77050741	0	-	77044258	77050741	789624	6	37,135,24,159,291,166,	0,9059,10240,10631,12032,16570,
#Deleted in new
chr12	77044533	77050746	chr12:77044533-77050746	0	-	77044598	77050746	789624	3	262,291,171,	0,1504,6042,
#Partially deleted in new
chr12	77045621	77065563	chr12:77045621-77065563	0	-	77045621	77045621	8553170	5	707,169,276,93,219,	0,4954,10233,18921,19723,
#Partially deleted in new
chr12	77055877	77065550	chr12:77055877-77065550	0	-	77055877	77064635	789624	3	253,111,206,	0,8665,9467,
#Partially deleted in new
chr12	77219602	77228693	chr12:77219602-77228693	3	-	77219602	77219602	8553170	2	210,158,	0,8933,
#Partially deleted in new
chr12	77324640	78007031	chr12:77324640-78007031	0	+	77572194	78007031	789624	9	574,408,118,53,73,184,69,140,613,	0,247218,615678,616440,641588,643878,670162,673696,681778,
#Partially deleted in new
chr12	77775782	77783576	chr12:77775782-77783576	3	+	77775782	77775782	8553170	2	62,314,	0,7480,
#Partially deleted in new
chr12	77830904	78050007	chr12:77830904-78050007	0	+	77831461	78050007	789624	10	800,118,53,73,184,69,140,1027,116,15,	0,109414,110176,135324,137614,163898,167432,175514,190842,219088,
#Partially deleted in new
chr12	77831288	78213007	chr12:77831288-78213007	1	+	77831461	78210517	789624	40	416,118,53,73,184,69,140,1027,116,109,384,120,133,271,709,489,42,161,189,53,24,78,84,112,122,21,173,66,154,175,98,96,169,236,155,72,197,119,204,2610,	0,109030,109792,134940,137230,163514,167048,175130,190458,218704,219475,227707,285483,286738,287948,290651,295878,297417,305888,308993,315080,317553,327914,337466,344017,345150,345852,346331,348240,349582,354312,356959,357320,358695,365958,367316,368046,369184,373646,379109,
#Partially deleted in new
chr12	77831288	78210638	chr12:77831288-78210638	3	+	77831461	78210517	789624	39	416,118,53,73,184,69,140,1027,116,109,384,120,133,271,709,489,42,161,189,53,24,78,84,112,122,21,173,154,175,98,96,169,236,155,72,197,119,204,241,	0,109030,109792,134940,137230,163514,167048,175130,190458,218704,219475,227707,285483,286738,287948,290651,295878,297417,305888,308993,315080,317553,327914,337466,344017,345150,345852,348240,349582,354312,356959,357320,358695,365958,367316,368046,369184,373646,379109,
#Partially deleted in new
chr12	77940318	77947553	chr12:77940318-77947553	0	+	77940318	77940318	8553170	3	118,53,126,	0,762,7109,
#Partially deleted in new
chr12	77966275	78006594	chr12:77966275-78006594	0	+	77966275	77966275	8553170	4	26,184,140,118,	0,2243,32061,40201,
#Partially deleted in new
chr12	77966275	78006766	chr12:77966275-78006766	0	+	77966275	78006766	789624	4	26,184,140,348,	0,2243,32061,40143,
#Partially deleted in new
chr12	78007177	78010897	chr12:78007177-78010897	0	+	78007177	78007177	8553170	2	268,57,	0,3663,
#Partially deleted in new
chr12	78036256	78211465	chr12:78036256-78211465	1	+	78036863	78210517	789624	29	1130,109,384,120,133,271,709,489,161,189,53,24,78,84,112,122,173,154,175,98,96,169,236,155,72,197,119,204,1068,	0,13736,14507,22739,80515,81770,82980,85683,92449,100920,104025,110112,112585,122946,132498,139049,140884,143272,144614,149344,151991,152352,153727,160990,162348,163078,164216,168678,174141,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	78052180	78091737	chr12:78052180-78091737	3	-	78052180	78052180	8553170	4	40,160,48,227,	0,4004,36586,39330,
#Partially deleted in new
chr12	78118043	78213008	chr12:78118043-78213008	0	+	78118043	78210517	789624	24	254,709,161,189,53,24,78,84,112,122,21,173,154,175,98,96,169,236,155,72,197,119,204,2611,	0,1193,10662,19133,22238,28325,30798,41159,50711,57262,58395,59097,61485,62827,67557,70204,70565,71940,79203,80561,81291,82429,86891,92354,
#Partially deleted in new
chr12	78122261	78199414	chr12:78122261-78199414	0	+	78122261	78199414	789624	19	167,161,189,53,24,78,84,112,122,173,154,175,98,96,169,236,155,72,80,	0,6444,14915,18020,24107,26580,36941,46493,53044,54879,57267,58609,63339,65986,66347,67722,74985,76343,77073,
#Deleted in new
chr12	78130336	78131004	chr12:78130336-78131004	7	-	78130336	78130336	16724991	1	668,	0,
#Partially deleted in new
chr12	78179419	78188304	chr12:78179419-78188304	0	+	78179419	78179419	8553170	4	263,175,98,57,	0,1451,6181,8828,
#Partially deleted in new
chr12	78180876	78190190	chr12:78180876-78190190	0	+	78180876	78180876	8553170	4	169,98,96,207,	0,4724,7371,9107,
#Partially deleted in new
chr12	78199075	78210983	chr12:78199075-78210983	0	+	78199075	78199075	8553170	5	120,197,119,204,586,	0,259,1397,5859,11322,
#Deleted in new
chr12	78199158	78200562	chr12:78199158-78200562	0	+	78199158	78199158	8553170	2	373,90,	0,1314,
#Partially deleted in new
chr12	78326679	78359746	chr12:78326679-78359746	3	-	78326679	78326679	789624	2	697,567,	0,32500,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	78352518	78483019	chr12:78352518-78483019	3	+	78352518	78352518	8553170	3	162,97,235,	0,124874,130266,
#Partially deleted in new
chr12	78426825	78442952	chr12:78426825-78442952	3	-	78426825	78426825	8553170	3	62,136,812,	0,13827,15315,
#Partially deleted in new
chr12	78448994	78540675	chr12:78448994-78540675	3	-	78448994	78448994	8553170	3	207,233,85,	0,2716,91596,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	78499299	78540675	chr12:78499299-78540675	1	-	78499299	78499299	8553170	2	193,85,	0,41291,
#Partially deleted in new
chr12	78793525	78794114	chr12:78793525-78794114	7	-	78793525	78793525	16724991	1	589,	0,
#Partially deleted in new
chr12	78804347	78808499	chr12:78804347-78808499	3	+	78804347	78804347	8553170	3	27,145,223,	0,798,3929,
#Partially deleted in new
chr12	78863992	79450279	chr12:78863992-79450279	1	+	79217519	79449124	0	12	343,112,133,66,183,185,123,168,168,118,134,1362,	0,1005,113806,183304,353510,421794,428015,432076,435391,489509,580080,584925,
#Partially deleted in new
chr12	78864668	79452006	chr12:78864668-79452006	3	+	79217519	79449124	0	11	441,133,66,183,185,123,168,168,118,134,3089,	0,113130,182628,352834,421118,427339,431400,434715,488833,579404,584249,
#Partially deleted in new
chr12	78864811	79452008	chr12:78864811-79452008	1	+	79217519	79449124	789624	10	298,133,183,185,114,168,168,118,134,3091,	0,112987,352691,420975,427205,431257,434572,488690,579261,584106,
#Partially deleted in new
chr12	78868709	79285904	chr12:78868709-79285904	0	+	79217519	79285904	789624	5	202,133,66,183,118,	0,109089,178587,348793,417077,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	78868771	79217517	chr12:78868771-79217517	0	+	78868771	78868771	8553170	6	140,124,105,133,66,15,	0,57825,86690,109027,178525,348731,
#Partially deleted in new
chr12	78964034	79285794	chr12:78964034-79285794	0	+	79217519	79285794	789624	5	116,133,66,183,8,	0,13764,83262,253468,321752,
#Partially deleted in new
chr12	78977521	79285837	chr12:78977521-79285837	0	+	79217519	79285837	789624	4	410,66,183,51,	0,69775,239981,308265,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	78977784	79285838	chr12:78977784-79285838	0	+	79217519	79285838	789624	6	147,89,66,42,183,52,	0,17974,69512,125229,239718,308002,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	79045630	79450294	chr12:79045630-79450294	1	+	79217519	79449124	0	10	196,66,183,185,123,168,168,118,134,1377,	0,1666,171872,240156,246377,250438,253753,307871,398442,403287,
#Partially deleted in new
chr12	79045704	79296124	chr12:79045704-79296124	0	+	79217519	79296124	789624	6	122,66,183,185,114,56,	0,1592,171798,240082,246312,250364,
#Partially deleted in new
chr12	79046317	79296139	chr12:79046317-79296139	0	+	79217519	79296139	789624	6	134,66,183,185,123,71,	0,979,171185,239469,245690,249751,
#Partially deleted in new
chr12	79291798	79353542	chr12:79291798-79353542	0	+	79291798	79291798	8553170	5	56,123,168,168,41,	0,209,4270,7585,61703,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	79341204	79503396	chr12:79341204-79503396	0	-	79341204	79341204	8553170	2	205,228,	0,161964,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	79392251	79455460	chr12:79392251-79455460	1	-	79392251	79392251	8553170	2	1674,146,	0,63063,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	79393671	79503362	chr12:79393671-79503362	3	-	79393671	79393671	8553170	2	254,194,	0,109497,
#Deleted in new
chr12	79419256	79419321	chr12:79419256-79419321	3	+	79419256	79419256	5263520	1	65,	0,
#Partially deleted in new
chr12	79500118	79500687	chr12:79500118-79500687	7	-	79500118	79500118	16724991	2	124,119,	0,450,
#Duplicated in new
chr12	79545529	79550535	chr12:79545529-79550535	1	+	79545529	79545529	8553170	3	29,111,427,	0,536,4579,
#Deleted in new
chr12	79558781	79559166	chr12:79558781-79559166	7	+	79558781	79558781	16724991	1	385,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	79574978	79597982	chr12:79574978-79597982	0	-	79574978	79574978	8553170	5	89,83,105,148,167,	0,17632,19350,21532,22837,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	79584873	79691097	chr12:79584873-79691097	3	-	79592606	79690244	0	7	7820,105,148,35,132,663,226,	0,9455,11637,28701,36202,104855,105998,
#Partially deleted in new
chr12	79584878	79596534	chr12:79584878-79596534	0	-	79585141	79596534	789624	4	270,83,105,24,	0,7732,9450,11632,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	79589791	79632162	chr12:79589791-79632162	0	-	79589791	79589791	8553170	2	490,57,	0,42314,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	79592514	79597089	chr12:79592514-79597089	0	-	79592514	79592514	8553170	3	179,105,579,	0,1814,3996,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	79603667	79690080	chr12:79603667-79690080	0	-	79604657	79690080	789624	4	1054,35,132,352,	0,9907,17408,86061,
#Partially deleted in new
chr12	79621114	79690057	chr12:79621114-79690057	0	-	79621114	79621114	8553170	3	93,71,329,	0,14435,68614,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	79667978	79690030	chr12:79667978-79690030	0	-	79667978	79667978	8553170	2	430,302,	0,21750,
#Deleted in new
chr12	79688371	79690061	chr12:79688371-79690061	0	-	79688371	79688371	8553170	2	94,333,	0,1357,
#Deleted in new
chr12	79690017	79690814	chr12:79690017-79690814	0	-	79690017	79690244	789624	2	374,120,	0,677,
#Deleted in new
chr12	79690053	79690581	chr12:79690053-79690581	0	-	79690053	79690244	789624	2	338,26,	0,502,
#Partially deleted in new
chr12	79690143	79778451	chr12:79690143-79778451	3	+	79690143	79690143	8553170	2	253,101,	0,88207,
#Partially deleted in new
chr12	79773562	79935455	chr12:79773562-79935455	3	-	79775928	79934931	0	26	2453,51,48,105,136,17,66,122,169,201,91,177,168,105,95,216,125,158,89,75,145,160,119,131,257,103,	0,4987,8252,12811,15085,16904,20300,22075,23219,23632,24931,32029,32603,33663,34920,36232,43831,47211,47515,48553,54757,58769,71739,99245,161132,161790,
#Partially deleted in new
chr12	79773567	79935198	chr12:79773567-79935198	1	-	79775928	79934931	0	25	2448,51,48,105,136,17,66,122,169,201,91,177,168,105,95,216,125,158,89,75,145,160,119,131,504,	0,4982,8247,12806,15080,16899,20295,22070,23214,23627,24926,32024,32598,33658,34915,36227,43826,47206,47510,48548,54752,58764,71734,99240,161127,
#Partially deleted in new
chr12	79774405	79935460	chr12:79774405-79935460	1	-	79775928	79934931	0	25	1610,51,48,136,17,66,122,169,201,91,177,168,105,95,216,125,158,89,75,145,160,119,131,257,108,	0,4144,7409,14242,16061,19457,21232,22376,22789,24088,31186,31760,32820,34077,35389,42988,46368,46672,47710,53914,57926,70896,98402,160289,160947,
#Partially deleted in new
chr12	79775540	79797237	chr12:79775540-79797237	0	-	79781842	79797237	789624	11	475,51,48,25,105,136,17,66,122,169,43,	0,3009,6274,7030,10833,13107,14926,18322,20097,21241,21654,
#Partially deleted in new
chr12	79775777	79788752	chr12:79775777-79788752	0	-	79778568	79788752	789624	6	238,51,13,48,105,105,	0,2772,3561,6037,10596,12870,
#Partially deleted in new
chr12	79775913	79797254	chr12:79775913-79797254	0	-	79789628	79797254	789624	11	102,51,48,105,136,83,17,66,122,169,60,	0,2636,5901,10460,12734,13684,14553,17949,19724,20868,21281,
#Partially deleted in new
chr12	79775917	79782341	chr12:79775917-79782341	0	-	79775917	79775917	8553170	3	98,51,527,	0,2632,5897,
#Partially deleted in new
chr12	79775917	79796790	chr12:79775917-79796790	0	-	79778568	79796790	789624	10	98,51,31,48,105,136,17,66,122,9,	0,2632,3403,5897,10456,12730,14549,17945,19720,20864,
#Partially deleted in new
chr12	79775917	79786914	chr12:79775917-79786914	0	-	79775917	79775917	8553170	4	98,51,48,541,	0,2632,5897,10456,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr12	79775922	79913911	chr12:79775922-79913911	1	-	79775928	79872914	0	25	93,51,48,105,136,17,66,122,169,201,91,177,168,105,95,216,125,158,89,75,145,160,119,131,115,	0,2627,5892,10451,12725,14544,17940,19715,20859,21272,22571,29669,30243,31303,32560,33872,41471,44851,45155,46193,52397,56409,69379,96885,137874,
#Partially deleted in new
chr12	79775928	79934931	chr12:79775928-79934931	1	-	79775928	79934931	0	24	87,51,48,105,136,17,66,122,169,201,91,177,105,95,216,125,158,89,75,145,160,119,131,237,	0,2621,5886,10445,12719,14538,17934,19709,20853,21266,22565,29663,31297,32554,33866,41465,44845,45149,46187,52391,56403,69373,96879,158766,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	79775930	79790483	chr12:79775930-79790483	0	-	79775930	79775930	8553170	6	85,802,48,105,2007,17,	0,2619,5884,10443,10846,14536,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	79775934	79780745	chr12:79775934-79780745	0	-	79775934	79775934	8553170	2	81,2196,	0,2615,
#Deleted in new
chr12	79793796	79798498	chr12:79793796-79798498	0	-	79793796	79793796	8553170	5	132,122,169,201,5,	0,1841,2985,3398,4697,
#Partially deleted in new
chr12	79796916	79817443	chr12:79796916-79817443	0	-	79796916	79817443	789624	9	34,201,91,177,132,105,95,216,50,	0,278,1577,8675,9249,10309,11566,12878,20477,
#Partially deleted in new
chr12	79797233	79935130	chr12:79797233-79935130	0	-	79797233	79934931	789624	15	162,91,168,105,95,216,125,158,89,75,145,160,119,131,436,	0,1260,8932,9992,11249,12561,20160,23540,23844,24882,31086,35098,48068,75574,137461,
#Partially deleted in new
chr12	79797268	79805816	chr12:79797268-79805816	0	-	79797268	79797268	8553170	3	127,91,225,	0,1225,8323,
#Partially deleted in new
chr12	79797329	79821118	chr12:79797329-79821118	0	-	79797329	79821118	789624	8	66,91,105,95,216,125,158,41,	0,1164,9896,11153,12465,20064,23444,23748,
#Partially deleted in new
chr12	79797346	79817518	chr12:79797346-79817518	0	-	79797346	79817518	8553170	9	49,91,177,168,105,95,216,117,125,	0,1147,8245,8819,9879,11136,12448,13048,20047,
#Partially deleted in new
chr12	79806815	79809815	chr12:79806815-79809815	0	-	79806815	79806815	8553170	3	515,95,21,	0,1667,2979,
#Deleted in new
chr12	79818783	79819465	chr12:79818783-79819465	3	-	79818783	79818783	8553170	1	682,	0,
#Partially deleted in new
chr12	79821111	79934715	chr12:79821111-79934715	0	-	79821111	79934715	789624	6	55,145,160,119,131,21,	0,7208,11220,24190,51696,113583,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	79823777	79825496	chr12:79823777-79825496	3	+	79823777	79823777	8553170	2	160,507,	0,1212,
#Partially deleted in new
chr12	79828127	79832596	chr12:79828127-79832596	0	-	79828127	79828127	8553170	2	337,265,	0,4204,
#Partially deleted in new
chr12	79828370	79872872	chr12:79828370-79872872	0	-	79828370	79845338	789624	5	94,160,119,144,65,	0,3961,16931,20417,44437,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	79878304	79878419	chr12:79878304-79878419	7	-	79878304	79878304	16724991	1	115,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	79934900	79942712	chr12:79934900-79942712	3	+	79934900	79934900	8553170	3	758,125,2351,	0,3827,5461,
#Deleted in new
chr12	79989013	79989218	chr12:79989013-79989218	7	-	79989013	79989013	16724991	1	205,	0,
#Partially deleted in new
chr12	80028892	80029631	chr12:80028892-80029631	7	+	80028892	80028892	16724991	1	739,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	80068690	80068757	chr12:80068690-80068757	3	-	80068690	80068690	8553170	1	67,	0,
#Partially deleted in new
chr12	80099536	80380879	chr12:80099536-80380879	3	+	80209431	80378048	789624	59	69,98,40,49,67,99,155,122,206,128,107,107,126,109,47,146,124,178,125,210,166,75,53,163,108,139,135,150,120,117,157,27,168,279,118,80,69,74,178,143,24,93,190,215,142,186,213,105,108,102,105,41,64,179,105,120,46,80,3032,	0,109876,111310,112412,118061,120277,122554,129720,133355,139314,139796,152156,152539,153929,154987,155503,156800,158288,162432,165464,166914,167716,170565,172111,178631,179491,197290,203097,206039,211074,213939,214768,219009,220885,224186,229128,229514,233468,236426,236876,237260,237375,239538,242411,252758,253788,256199,256879,257270,258711,259134,259323,267037,268024,268668,271033,272482,277586,278311,
#Partially deleted in new
chr12	80099536	80266080	chr12:80099536-80266080	0	+	80099536	80099536	8553170	23	69,143,318,111,98,40,49,67,99,155,122,206,128,107,107,126,109,47,146,124,178,125,1080,	0,31456,32264,89807,109876,111310,112412,118061,120277,122554,129720,133355,139314,139796,152156,152539,153929,154987,155503,156800,158288,162432,165464,
#Partially deleted in new
chr12	80099536	80379960	chr12:80099536-80379960	1	+	80209431	80378048	789624	63	69,143,318,317,123,111,98,40,49,67,99,155,122,206,128,107,107,126,109,47,146,124,178,125,210,166,75,53,163,108,139,150,120,117,157,27,168,279,118,80,69,74,178,143,24,93,190,215,142,186,213,105,108,102,105,41,64,179,105,120,46,80,2113,	0,31456,32264,32936,33963,89807,109876,111310,112412,118061,120277,122554,129720,133355,139314,139796,152156,152539,153929,154987,155503,156800,158288,162432,165464,166914,167716,170565,172111,178631,179491,203097,206039,211074,213939,214768,219009,220885,224186,229128,229514,233468,236426,236876,237260,237375,239538,242411,252758,253788,256199,256879,257270,258711,259134,259323,267037,268024,268668,271033,272482,277586,278311,
#Deleted in new
chr12	80102898	80103333	chr12:80102898-80103333	7	-	80102898	80102898	16724991	1	435,	0,
#Partially deleted in new
chr12	80209452	80379090	chr12:80209452-80379090	1	+	80209458	80378048	789624	58	58,40,49,67,99,155,122,206,128,107,107,126,109,47,146,124,178,125,210,166,75,53,163,108,139,135,150,120,117,157,27,168,279,118,80,69,74,178,143,24,93,190,215,142,186,213,105,108,102,105,41,64,179,105,120,46,80,1243,	0,1394,2496,8145,10361,12638,19804,23439,29398,29880,42240,42623,44013,45071,45587,46884,48372,52516,55548,56998,57800,60649,62195,68715,69575,87374,93181,96123,101158,104023,104852,109093,110969,114270,119212,119598,123552,126510,126960,127344,127459,129622,132495,142842,143872,146283,146963,147354,148795,149218,149407,157121,158108,158752,161117,162566,167670,168395,
#Partially deleted in new
chr12	80336511	80379079	chr12:80336511-80379079	0	+	80336511	80378048	789624	18	44,24,93,190,215,142,186,213,105,108,102,105,179,105,120,46,80,1232,	0,285,400,2563,5436,15783,16813,19224,19904,20295,21736,22159,31049,31693,34058,35507,40611,41336,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	80343514	80343792	chr12:80343514-80343792	3	-	80343514	80343514	8553170	1	278,	0,
#Partially deleted in new
chr12	80356353	80379090	chr12:80356353-80379090	0	+	80356353	80356353	8553170	12	167,108,102,105,41,64,179,105,120,46,80,1243,	0,453,1894,2317,2506,10220,11207,11851,14216,15665,20769,21494,
#Partially deleted in new
chr12	80356481	80378859	chr12:80356481-80378859	0	+	80356481	80366592	789624	13	39,108,102,105,41,86,64,179,105,120,46,80,1012,	0,325,1766,2189,2378,9786,10092,11079,11723,14088,15537,20641,21366,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	80358288	80378756	chr12:80358288-80378756	0	+	80358288	80361076	789624	11	61,105,41,118,64,179,105,120,46,80,909,	0,382,571,2779,8285,9272,9916,12281,13730,18834,19559,
#Deleted in new
chr12	80367700	80370838	chr12:80367700-80370838	0	+	80367700	80370731	789624	3	39,105,269,	0,504,2869,
#Partially deleted in new
chr12	80402177	80409550	chr12:80402177-80409550	0	+	80402177	80402177	8553170	6	48,138,136,258,215,283,	0,908,1458,2035,3668,7090,
#Partially deleted in new
chr12	80405993	80445717	chr12:80405993-80445717	0	+	80424457	80445717	789624	14	67,190,305,276,147,131,204,151,107,95,166,161,109,227,	0,3274,3587,5745,14759,16650,16951,18444,19029,21463,28942,37758,38747,39497,
#Partially deleted in new
chr12	80420752	80445524	chr12:80420752-80445524	0	+	80424457	80445524	789624	12	147,131,204,137,151,107,95,166,258,161,109,34,	0,1891,2192,2944,3685,4270,6704,14183,15372,22999,23988,24738,
#Partially deleted in new
chr12	80420756	80445524	chr12:80420756-80445524	0	+	80422746	80445524	789624	9	143,131,151,107,95,166,161,109,34,	0,1887,3681,4266,6700,14179,22995,23984,24734,
#Partially deleted in new
chr12	80435082	80680189	chr12:80435082-80680189	1	+	80435082	80679023	789624	45	19,161,109,227,70,200,250,129,147,173,181,162,180,108,282,183,102,121,161,146,169,291,276,152,142,270,324,122,187,245,67,159,223,74,100,129,82,91,77,135,126,149,136,124,1204,	0,8669,9658,10408,22492,24201,25570,33627,37022,49350,58192,59850,60109,60916,61167,70941,71486,75240,98932,99809,104693,106472,107006,107647,111473,114382,153046,169976,175356,178509,181117,184301,185071,186978,197109,199862,214505,217661,222902,233924,234256,235261,238086,243519,243903,
#Partially deleted in new
chr12	80444167	80680271	chr12:80444167-80680271	3	+	80444345	80679023	789624	45	232,109,227,70,200,250,129,147,173,181,162,180,108,282,183,102,121,161,146,169,291,276,152,142,270,324,122,187,245,67,159,223,74,100,129,27,82,91,77,135,126,149,136,124,1286,	0,573,1323,13407,15116,16485,24542,27937,40265,49107,50765,51024,51831,52082,61856,62401,66155,89847,90724,95608,97387,97921,98562,102388,105297,143961,160891,166271,169424,172032,175216,175986,177893,188024,190777,204729,205420,208576,213817,224839,225171,226176,229001,234434,234818,
#Partially deleted in new
chr12	80444280	80680271	chr12:80444280-80680271	1	+	80444345	80679023	789624	45	119,109,227,70,200,250,129,147,173,181,162,180,108,282,183,102,121,161,146,169,291,276,152,142,270,324,122,187,245,67,159,223,74,100,129,27,82,91,77,135,126,149,136,124,1286,	0,460,1210,13294,15003,16372,24429,27824,40152,48994,50652,50911,51718,51969,61743,62288,66042,89734,90611,95495,97274,97808,98449,102275,105184,143848,160778,166158,169311,171919,175103,175873,177780,187911,190664,204616,205307,208463,213704,224726,225058,226063,228888,234321,234705,
#Partially deleted in new
chr12	80512641	80539838	chr12:80512641-80539838	0	+	80512641	80512641	8553170	5	156,78,161,146,63,	0,13270,21373,22250,27134,
#Partially deleted in new
chr12	80542255	80547123	chr12:80542255-80547123	0	+	80542255	80542255	8553170	3	109,152,568,	0,474,4300,
#Partially deleted in new
chr12	80561016	80561560	chr12:80561016-80561560	7	-	80561016	80561016	16724991	1	544,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	80583682	80593701	chr12:80583682-80593701	3	-	80583682	80583682	8553170	3	561,140,33,	0,2936,9986,
#Partially deleted in new
chr12	80632221	80658051	chr12:80632221-80658051	0	+	80632221	80658051	789624	5	70,129,82,91,67,	0,2723,17366,20522,25763,
#Partially deleted in new
chr12	80634669	80652824	chr12:80634669-80652824	0	+	80634669	80634669	8553170	3	404,82,81,	0,14918,18074,
#Deleted in new
chr12	80707497	80709474	chr12:80707497-80709474	3	+	80707719	80708960	789624	3	741,91,633,	0,1026,1344,
#Deleted in new
chr12	80716911	80719673	chr12:80716911-80719673	3	+	80717063	80719051	789624	3	653,76,813,	0,1446,1949,
#Partially deleted in new
chr12	80763153	80769891	chr12:80763153-80769891	1	+	80763153	80763153	789624	5	61,115,103,71,288,	0,436,1068,3596,6450,
#Partially deleted in new
chr12	80763153	80770717	chr12:80763153-80770717	3	+	80763153	80763153	789624	3	75,71,1114,	0,3596,6450,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	80792519	80937925	chr12:80792519-80937925	3	-	80811464	80937722	789624	6	5207,219,210,72,119,285,	0,18945,53210,55731,96731,145121,
#Partially deleted in new
chr12	80797574	80937780	chr12:80797574-80937780	0	-	80848142	80937722	789624	7	152,219,210,77,72,119,140,	0,13890,48155,50524,50676,91676,140066,
#Deleted in new
chr12	80832532	80832629	chr12:80832532-80832629	3	-	80832532	80832532	5263520	1	97,	0,
#Partially deleted in new
chr12	80841688	80937704	chr12:80841688-80937704	0	-	80842050	80937704	789624	5	440,210,72,119,64,	0,4041,6562,47562,95952,
#Partially deleted in new
chr12	80845563	80889348	chr12:80845563-80889348	0	-	80845717	80889348	789624	3	376,72,98,	0,2687,43687,
#Deleted in new
chr12	80860954	80861508	chr12:80860954-80861508	7	-	80860954	80860954	16724991	1	554,	0,
#Deleted in new
chr12	80935735	80935833	chr12:80935735-80935833	3	-	80935735	80935735	5263520	1	98,	0,
#Deleted in new
chr12	80936413	80940246	chr12:80936413-80940246	0	+	80936413	80936413	8553170	1	3833,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	80937814	81134963	chr12:80937814-81134963	0	+	81109572	81134963	789624	4	104,137,145,148,	0,84568,171745,197001,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	81077210	81261205	chr12:81077210-81261205	3	+	81078120	81254922	789624	16	1221,145,189,135,141,81,96,152,104,96,64,82,123,100,176,6349,	0,32349,57605,61920,65896,74633,74790,97577,122130,139690,142802,153846,156138,176096,176284,177646,
#Partially deleted in new
chr12	81078056	81255466	chr12:81078056-81255466	1	+	81078120	81254922	789624	16	372,145,189,135,141,81,96,152,104,96,64,82,123,100,176,610,	0,31503,56759,61074,65050,73787,73944,96731,121284,138844,141956,153000,155292,175250,175438,176800,
#Partially deleted in new
chr12	81094374	81125845	chr12:81094374-81125845	3	-	81094374	81094374	8553170	5	358,60,87,115,262,	0,10394,23591,30024,31209,
#Partially deleted in new
chr12	81134794	81143502	chr12:81134794-81143502	0	+	81134794	81134794	8553170	3	210,135,396,	0,4336,8312,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	81151650	81255803	chr12:81151650-81255803	0	+	81151650	81151650	8553170	11	274,96,152,104,96,64,82,123,100,176,947,	0,350,23137,47690,65250,68362,79406,81698,101656,101844,103206,
#Deleted in new
chr12	81158387	81158461	chr12:81158387-81158461	3	+	81158387	81158387	5263520	1	74,	0,
#Partially deleted in new
chr12	81174557	81199822	chr12:81174557-81199822	0	+	81174557	81174557	8553170	2	382,482,	0,24783,
#Partially deleted in new
chr12	81174831	81220031	chr12:81174831-81220031	0	+	81174831	81199673	789624	5	108,104,52,96,19,	0,24509,24828,42069,45181,
#Partially deleted in new
chr12	81257974	81598371	chr12:81257974-81598371	1	-	81261981	81598032	0	29	1686,92,160,69,176,98,176,30,63,201,82,94,155,131,30,238,221,136,92,63,132,84,135,147,222,117,165,102,420,	0,3974,5256,8977,9937,19342,23282,25035,26266,36860,41326,67802,81205,83103,86689,89558,95144,100107,104718,109133,110750,111136,116659,117821,126048,147812,187581,199790,339977,
#Partially deleted in new
chr12	81257974	81369414	chr12:81257974-81369414	1	-	81261981	81341121	0	22	1686,92,160,69,176,98,194,201,82,94,155,131,30,107,221,136,92,63,64,132,84,125,	0,3974,5256,8977,9937,19342,23282,36860,41326,67802,81205,83103,86689,89689,95144,100107,104718,109133,110128,110750,111136,111315,
#Partially deleted in new
chr12	81258265	81759330	chr12:81258265-81759330	3	-	81261981	81754221	0	33	1395,92,160,69,176,98,194,30,63,201,82,94,155,131,30,238,221,136,92,63,132,84,135,147,222,117,75,165,102,54,251,108,51,	0,3683,4965,8686,9646,19051,22991,24744,25975,36569,41035,67511,80914,82812,86398,89267,94853,99816,104427,108842,110459,110845,116368,117530,125757,147521,181706,187290,199499,418525,495707,500134,501014,
#Partially deleted in new
chr12	81258266	81758693	chr12:81258266-81758693	1	-	81259631	81754221	789624	31	1394,160,69,176,98,194,30,63,201,82,94,155,131,30,238,221,136,92,63,132,84,135,147,222,117,75,165,102,54,251,294,	0,4964,8685,9645,19050,22990,24743,25974,36568,41034,67510,80913,82811,86397,89266,94852,99815,104426,108841,110458,110844,116367,117529,125756,147520,181705,187289,199498,418524,495706,500133,
#Partially deleted in new
chr12	81258876	81758670	chr12:81258876-81758670	1	-	81259631	81754221	0	31	784,160,69,176,98,194,30,63,201,82,9,94,155,131,30,238,221,136,92,63,132,84,135,147,222,117,75,165,102,251,271,	0,4354,8075,9035,18440,22380,24133,25364,35958,40424,53283,66900,80303,82201,85787,88656,94242,99205,103816,108231,109848,110234,115757,116919,125146,146910,181095,186679,198888,495096,499523,
#Partially deleted in new
chr12	81259100	81598256	chr12:81259100-81598256	0	-	81259100	81259100	8553170	10	296,20,147,222,117,75,165,102,90,305,	0,115648,116695,124922,146686,180871,186455,198664,276321,338851,
#Partially deleted in new
chr12	81259165	81369414	chr12:81259165-81369414	1	-	81259631	81369161	0	20	495,160,69,176,98,194,201,82,94,155,131,30,238,221,136,92,63,132,84,125,	0,4065,7786,8746,18151,22091,35669,40135,66611,80014,81912,85498,88367,93953,98916,103527,107942,109559,109945,110124,
#Partially deleted in new
chr12	81259267	81369349	chr12:81259267-81369349	0	-	81368103	81369161	789624	22	393,92,160,69,176,98,194,201,82,94,155,131,30,107,221,136,92,63,64,132,84,60,	0,2681,3963,7684,8644,18049,21989,35567,40033,66509,79912,81810,85396,88396,93851,98814,103425,107840,108835,109457,109843,110022,
#Partially deleted in new
chr12	81259435	81512362	chr12:81259435-81512362	1	-	81261981	81445666	789624	30	225,92,160,69,176,98,194,30,63,201,82,94,155,131,30,238,221,136,92,63,132,84,135,147,222,117,75,165,102,79,	0,2513,3795,7516,8476,17881,21821,23574,24805,35399,39865,66341,79744,81642,85228,88097,93683,98646,103257,107672,109289,109675,115198,116360,124587,146351,180536,186120,198329,252848,
#Partially deleted in new
chr12	81259600	81598371	chr12:81259600-81598371	1	-	81261981	81598032	0	29	60,92,160,69,176,98,176,30,201,82,94,155,131,30,238,221,136,92,63,132,84,135,147,222,117,75,165,102,420,	0,2348,3630,7351,8311,17716,21656,23409,35234,39700,66176,79579,81477,85063,87932,93518,98481,103092,107507,109124,109510,115033,116195,124422,146186,180371,185955,198164,338351,
#Partially deleted in new
chr12	81261960	81758653	chr12:81261960-81758653	1	-	81261981	81754221	0	31	80,160,69,176,98,176,30,63,201,82,94,155,131,30,238,221,136,92,63,132,84,135,147,222,117,75,165,102,54,251,254,	0,1270,4991,5951,15356,19296,21049,22280,32874,37340,63816,77219,79117,82703,85572,91158,96121,100732,105147,106764,107150,112673,113835,122062,143826,178011,183595,195804,414830,492012,496439,
#Partially deleted in new
chr12	81261966	81598340	chr12:81261966-81598340	1	-	81261981	81598032	0	28	74,160,69,176,98,176,30,63,201,82,94,155,131,30,238,221,136,92,63,132,84,135,147,222,117,165,102,389,	0,1264,4985,5945,15350,19290,21043,22274,32868,37334,63810,77213,79111,82697,85566,91152,96115,100726,105141,106758,107144,112667,113829,122056,143820,183589,195798,335985,
#Partially deleted in new
chr12	81261966	81758647	chr12:81261966-81758647	1	-	81261981	81754221	0	30	74,160,69,176,98,194,30,201,82,94,155,131,30,238,221,136,92,63,132,84,135,147,222,117,75,165,102,54,251,248,	0,1264,4985,5945,15350,19290,21043,32868,37334,63810,77213,79111,82697,85566,91152,96115,100726,105141,106758,107144,112667,113829,122056,143820,178005,183589,195798,414824,492006,496433,
#Partially deleted in new
chr12	81277371	81325810	chr12:81277371-81325810	0	-	81277371	81325810	789624	6	43,194,201,82,9,34,	0,3885,17463,21929,34788,48405,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	81279188	81292897	chr12:81279188-81292897	0	+	81279188	81279188	8553170	3	117,108,576,	0,3498,13133,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	81279191	81298427	chr12:81279191-81298427	1	+	81279191	81279191	8553170	5	114,108,67,136,365,	0,3495,13266,17442,18871,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	81279200	81298283	chr12:81279200-81298283	0	+	81279200	81279200	8553170	5	105,108,182,136,221,	0,3486,13142,17433,18862,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	81279200	81312289	chr12:81279200-81312289	1	+	81279200	81279200	8553170	6	105,108,182,136,101,243,	0,3486,13142,17433,18862,32846,
#Partially deleted in new
chr12	81281337	81339214	chr12:81281337-81339214	0	-	81281337	81339214	789624	7	113,30,201,82,9,94,35,	0,1672,13497,17963,30822,44439,57842,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	81282683	81312409	chr12:81282683-81312409	0	+	81282683	81282683	8553170	4	111,182,136,363,	0,9659,13950,29363,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	81282688	81312282	chr12:81282688-81312282	0	+	81282688	81282688	8553170	5	106,182,136,101,236,	0,9654,13945,15374,29358,
#Partially deleted in new
chr12	81294581	81299331	chr12:81294581-81299331	0	-	81294581	81294581	8553170	2	454,31,	0,4719,
#Partially deleted in new
chr12	81339187	81344768	chr12:81339187-81344768	0	-	81339187	81339187	8553170	3	147,131,105,	0,1890,5476,
#Partially deleted in new
chr12	81339209	81350486	chr12:81339209-81350486	0	-	81339209	81339209	8553170	5	125,131,30,238,54,	0,1868,5454,8323,11223,
#Partially deleted in new
chr12	81347711	81369423	chr12:81347711-81369423	0	-	81347711	81369302	789624	8	59,221,136,92,63,132,84,130,	0,5407,10370,14981,19396,21013,21399,21582,
#Partially deleted in new
chr12	81358182	81369405	chr12:81358182-81369405	0	-	81358182	81369161	789624	5	35,92,63,132,295,	0,4510,8925,10542,10928,
#Partially deleted in new
chr12	81369124	81445578	chr12:81369124-81445578	0	-	81369124	81445578	789624	7	70,135,210,222,117,75,23,	0,5509,6608,14898,36662,70847,76431,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	81378041	81431411	chr12:81378041-81431411	1	+	81378041	81378041	8553170	3	164,42,1409,	0,39256,51961,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	81417260	81472954	chr12:81417260-81472954	3	+	81417260	81417260	8553170	4	79,76,147,435,	0,47978,53901,55259,
#Partially deleted in new
chr12	81424848	81512384	chr12:81424848-81512384	0	-	81424848	81424848	8553170	5	109,75,165,102,101,	0,15123,20707,32916,87435,
#Partially deleted in new
chr12	81439879	81676847	chr12:81439879-81676847	0	-	81439879	81439879	8553170	4	167,165,102,57,	0,5676,17885,236911,
#Partially deleted in new
chr12	81445630	81759553	chr12:81445630-81759553	0	-	81445630	81754221	789624	5	90,102,251,108,274,	0,12134,308342,312769,313649,
#Partially deleted in new
chr12	81457805	81759313	chr12:81457805-81759313	0	-	81457805	81754221	789624	5	61,54,251,108,100,	0,218985,296167,300594,301408,
#Partially deleted in new
chr12	81505679	81512345	chr12:81505679-81512345	0	-	81505679	81505679	8553170	2	431,62,	0,6604,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	81545325	81546450	chr12:81545325-81546450	7	-	81545325	81545325	16724991	1	1125,	0,
#Partially deleted in new
chr12	81675485	81687560	chr12:81675485-81687560	0	-	81675485	81675485	8553170	3	167,54,150,	0,1305,11925,
#Partially deleted in new
chr12	81676656	81759314	chr12:81676656-81759314	0	-	81676656	81676656	8553170	4	188,251,108,35,	0,77316,81743,82623,
#Deleted in new
chr12	81868367	81869046	chr12:81868367-81869046	7	+	81868367	81868367	16724991	1	679,	0,
#Partially deleted in new
chr12	81953718	81993133	chr12:81953718-81993133	3	+	81953718	81953718	789624	3	437,233,702,	0,529,38713,
#Partially deleted in new
chr12	81998631	81998962	chr12:81998631-81998962	7	+	81998631	81998631	16724991	1	331,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	82352305	82358788	chr12:82352305-82358788	3	-	82353150	82358376	789624	4	1007,100,310,566,	0,2189,4654,5917,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	82352838	82356121	chr12:82352838-82356121	0	-	82352838	82352838	8553170	2	474,1627,	0,1656,
#Partially deleted in new
chr12	82352846	82358786	chr12:82352846-82358786	0	-	82352846	82352846	789624	4	466,100,310,108,	0,1648,4113,5832,
#Deleted in new
chr12	82356843	82358805	chr12:82356843-82358805	0	-	82356843	82356843	8553170	2	426,127,	0,1835,
#Deleted in new
chr12	82356856	82358409	chr12:82356856-82358409	0	-	82356856	82356856	8553170	2	413,187,	0,1366,
#Deleted in new
chr12	82357114	82358292	chr12:82357114-82358292	0	-	82357114	82357114	8553170	2	217,70,	0,1108,
#Partially deleted in new
chr12	82358496	82479236	chr12:82358496-82479236	3	+	82358565	82479024	789624	12	328,165,107,600,148,95,30,74,94,75,72,305,	0,28306,31319,40298,44486,72396,76198,80221,98230,118147,118784,120435,
#Partially deleted in new
chr12	82358527	82388902	chr12:82358527-82388902	0	+	82358527	82358527	8553170	3	297,165,101,	0,28275,30274,
#Partially deleted in new
chr12	82358528	82459931	chr12:82358528-82459931	0	+	82358528	82358528	8553170	10	296,165,107,600,148,95,30,74,94,56,	0,28274,31287,40266,44454,72364,76166,80189,98198,101347,
#Partially deleted in new
chr12	82358528	82386972	chr12:82358528-82386972	0	+	82358528	82358528	8553170	2	388,170,	0,28274,
#Partially deleted in new
chr12	82358539	82398980	chr12:82358539-82398980	0	+	82358565	82398980	789624	4	285,165,107,186,	0,28263,31276,40255,
#Partially deleted in new
chr12	82399358	82439087	chr12:82399358-82439087	0	+	82399358	82438840	789624	5	36,148,95,30,370,	0,3624,31534,35336,39359,
#Partially deleted in new
chr12	82438514	82479166	chr12:82438514-82479166	0	+	82438514	82438514	8553170	5	277,94,75,72,235,	0,18212,38129,38766,40417,
#Deleted in new
chr12	82468455	82468948	chr12:82468455-82468948	7	+	82468455	82468455	16724991	1	493,	0,
#Partially deleted in new
chr12	82474498	82479236	chr12:82474498-82479236	0	+	82474498	82474498	8553170	4	85,75,72,305,	0,2145,2782,4433,
#Deleted in new
chr12	82476298	82479169	chr12:82476298-82479169	0	+	82476298	82476298	8553170	3	420,72,238,	0,982,2633,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	82481117	82497560	chr12:82481117-82497560	3	-	82481117	82481117	8553170	3	363,69,27,	0,842,16416,
#Deleted in new
chr12	82505210	82506188	chr12:82505210-82506188	3	-	82505210	82505210	8553170	2	189,88,	0,890,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	82512676	82515817	chr12:82512676-82515817	3	+	82512676	82512676	8553170	1	3141,	0,
#Partially deleted in new
chr12	82686879	83134852	chr12:82686879-83134852	3	+	82687586	83132389	789624	12	790,571,829,115,86,185,79,122,82,115,64,2643,	0,170130,208938,243551,278144,278680,280039,299045,343918,364024,374888,445330,
#Partially deleted in new
chr12	82686879	82986573	chr12:82686879-82986573	0	+	82686879	82686879	8553170	8	790,571,829,115,86,185,79,649,	0,170130,208938,243551,278144,278680,280039,299045,
#Partially deleted in new
chr12	82687000	82965971	chr12:82687000-82965971	1	+	82687586	82965789	789624	6	669,571,829,115,86,412,	0,170009,208817,243430,278023,278559,
#Partially deleted in new
chr12	82687480	83134870	chr12:82687480-83134870	0	+	82687586	82895842	789624	11	189,829,115,86,185,79,122,82,115,64,2661,	0,208337,242950,277543,278079,279438,298444,343317,363423,374287,444729,
#Deleted in new
chr12	83021889	83021992	chr12:83021889-83021992	3	+	83021889	83021889	8553170	1	103,	0,
#Deleted in new
chr12	83151330	83152190	chr12:83151330-83152190	7	+	83151330	83151330	16724991	1	860,	0,
#Partially deleted in new
chr12	83171589	83172740	chr12:83171589-83172740	3	+	83171589	83171589	8553170	2	87,655,	0,496,
#Deleted in new
chr12	83661008	83661719	chr12:83661008-83661719	3	-	83661008	83661008	8553170	2	278,291,	0,420,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	84147303	84154338	chr12:84147303-84154338	3	-	84147303	84147303	8553170	2	450,88,	0,6947,
#Partially deleted in new
chr12	84183323	84183448	chr12:84183323-84183448	3	-	84183323	84183323	8553170	1	125,	0,
#Partially deleted in new
chr12	84271339	84294562	chr12:84271339-84294562	1	+	84271339	84271339	8553170	3	67,214,253,	0,22588,22970,
#Partially deleted in new
chr12	84284390	84294556	chr12:84284390-84294556	0	+	84284390	84284390	8553170	2	104,247,	0,9919,
#Partially deleted in new
chr12	84448624	84449878	chr12:84448624-84449878	7	-	84448624	84448624	16724991	1	1254,	0,
#Deleted in new
chr12	84671597	84672026	chr12:84671597-84672026	7	+	84671597	84671597	16724991	1	429,	0,
#Partially deleted in new
chr12	84859487	84912876	chr12:84859487-84912876	3	-	84861631	84892120	789624	12	2519,163,160,193,193,242,111,182,127,158,477,354,	0,3951,7546,10990,13114,13599,17009,24371,25947,26423,32344,53035,
#Partially deleted in new
chr12	84859712	84873330	chr12:84859712-84873330	1	-	84861858	84873319	789624	6	2155,163,160,193,193,244,	0,3726,7321,10765,12889,13374,
#Partially deleted in new
chr12	84861593	84912801	chr12:84861593-84912801	1	-	84861631	84886036	789624	11	413,163,160,193,193,242,111,182,127,158,279,	0,1845,5440,8884,11008,11493,14903,22265,23841,24317,50929,
#Partially deleted in new
chr12	84861602	84867833	chr12:84861602-84867833	0	-	84861602	84861602	8553170	3	404,163,800,	0,1836,5431,
#Partially deleted in new
chr12	84870561	84874528	chr12:84870561-84874528	0	-	84870561	84870561	8553170	4	109,193,242,43,	0,2040,2525,3924,
#Partially deleted in new
chr12	84873086	84912825	chr12:84873086-84912825	0	-	84873086	84873086	8553170	3	178,111,303,	0,3410,39436,
#Partially deleted in new
chr12	84873128	84912793	chr12:84873128-84912793	0	-	84873128	84876511	789624	3	200,111,271,	0,3368,39394,
#Partially deleted in new
chr12	84880844	84912793	chr12:84880844-84912793	1	-	84883744	84892120	789624	5	3196,127,158,477,271,	0,4590,5066,10987,31678,
#Partially deleted in new
chr12	84883997	84912821	chr12:84883997-84912821	0	-	84883997	84883997	8553170	4	43,127,76,299,	0,1437,1913,28525,
#Partially deleted in new
chr12	84891832	84912024	chr12:84891832-84912024	0	-	84891832	84892120	789624	2	476,87,	0,20105,
#Partially deleted in new
chr12	84892061	84913615	chr12:84892061-84913615	0	-	84892061	84892120	789624	3	247,183,116,	0,20461,21438,
#Partially deleted in new
chr12	84939523	84939668	chr12:84939523-84939668	7	-	84939523	84939523	16724991	1	145,	0,
#Partially deleted in new
chr12	85014310	85017595	chr12:85014310-85017595	0	-	85014486	85017595	789624	2	245,140,	0,3145,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	85014316	85016301	chr12:85014316-85016301	0	-	85014316	85014316	8553170	2	239,414,	0,1571,
#Partially deleted in new
chr12	85014316	85036257	chr12:85014316-85036257	3	-	85014486	85029946	789624	9	239,84,144,111,75,125,73,93,54,	0,1571,3139,5309,9009,13582,15402,15564,21887,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	85014317	85036277	chr12:85014317-85036277	0	-	85014317	85014317	8553170	7	3282,111,75,121,73,93,74,	0,5308,9008,10334,15401,15563,21886,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	85027898	85036251	chr12:85027898-85036251	0	-	85027898	85029946	789624	5	125,73,93,124,48,	0,1820,1982,7234,8305,
#Partially deleted in new
chr12	85036313	85124858	chr12:85036313-85124858	0	+	85036313	85036313	8553170	17	94,156,112,92,118,224,75,1638,153,151,192,194,128,74,94,180,789,	0,1839,4176,8404,9706,10933,15863,19233,28948,30434,36593,62041,62553,67690,70208,85383,87756,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	85036339	85048587	chr12:85036339-85048587	0	+	85036339	85036339	8553170	6	68,159,112,92,118,1341,	0,1810,4150,8378,9680,10907,
#Partially deleted in new
chr12	85036350	85047286	chr12:85036350-85047286	0	+	85038176	85047286	789624	6	57,136,112,92,118,40,	0,1822,4139,8367,9669,10896,
#Partially deleted in new
chr12	85036370	85245105	chr12:85036370-85245105	3	+	85038176	85244941	789624	27	37,156,112,92,118,224,75,1638,153,151,192,194,128,74,94,180,450,202,120,90,122,96,83,102,133,61,317,	0,1782,4119,8347,9649,10876,15806,19176,28891,30377,36536,61984,62496,67633,70151,85326,87699,91461,101479,115909,116653,117292,117641,124242,193146,196325,208418,
#Partially deleted in new
chr12	85044780	85055607	chr12:85044780-85055607	0	+	85044780	85055607	789624	4	29,118,224,61,	0,1239,2466,10766,
#Partially deleted in new
chr12	85159514	85263224	chr12:85159514-85263224	0	+	85159514	85159514	8553170	7	24,102,35,133,61,121,310,	0,1098,3248,70002,73181,85274,103400,
#Partially deleted in new
chr12	85160630	85233037	chr12:85160630-85233037	0	+	85160630	85232801	789624	3	84,133,342,	0,68886,72065,
#Partially deleted in new
chr12	85244788	85264457	chr12:85244788-85264457	0	+	85244788	85263060	8553170	2	121,1543,	0,18126,
#Partially deleted in new
chr12	85280106	85301784	chr12:85280106-85301784	3	+	85280261	85301475	789624	4	381,305,129,630,	0,3465,6746,21048,
#Deleted in new
chr12	85567877	85568239	chr12:85567877-85568239	7	+	85567877	85567877	16724991	1	362,	0,
#Deleted in new
chr12	85781891	85782444	chr12:85781891-85782444	7	-	85781891	85781891	16724991	1	553,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	85800696	85836570	chr12:85800696-85836570	3	-	85804701	85836201	789624	2	5266,416,	0,35458,
#Partially deleted in new
chr12	85874294	85882779	chr12:85874294-85882779	1	+	85874403	85882375	789624	3	182,62,557,	0,2345,7928,
#Partially deleted in new
chr12	85874296	85882992	chr12:85874296-85882992	3	+	85874403	85882375	0	4	180,62,225,770,	0,2343,4048,7926,
#Partially deleted in new
chr12	85878028	85882799	chr12:85878028-85882799	0	+	85878028	85878028	8553170	2	541,577,	0,4194,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	85955665	86049723	chr12:85955665-86049723	1	-	85979288	85989546	789624	4	24765,148,153,50,	0,27857,33734,94008,
#Deleted in new
chr12	85958685	85960946	chr12:85958685-85960946	3	+	85958685	85958685	8553170	2	876,382,	0,1879,
#Partially deleted in new
chr12	85978744	86049725	chr12:85978744-86049725	1	-	85979288	85989546	789624	5	1686,148,153,120,52,	0,4778,10655,49343,70929,
#Partially deleted in new
chr12	85978744	86838885	chr12:85978744-86838885	3	-	85979288	85989546	789624	9	1686,148,153,120,50,63,109,33,220,	0,4778,10655,49343,70929,355320,456412,748464,859921,
#Partially deleted in new
chr12	85979012	86256305	chr12:85979012-86256305	1	-	85979288	85989546	789624	6	1418,148,153,101,50,67,	0,4510,10387,49091,70661,277226,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	85979532	86256316	chr12:85979532-86256316	0	-	85979532	85989546	789624	6	898,148,153,96,50,78,	0,3990,9867,42916,70141,276706,
#Partially deleted in new
chr12	85979735	86256380	chr12:85979735-86256380	1	-	85979754	85989546	789624	5	60,148,150,50,142,	0,3787,9664,69938,276503,
#Partially deleted in new
chr12	86011799	86256414	chr12:86011799-86256414	0	-	86011799	86011799	8553170	5	103,78,101,50,176,	0,1881,16304,37874,244439,
#Deleted in new
chr12	86015696	86016441	chr12:86015696-86016441	7	+	86015696	86015696	16724991	1	745,	0,
#Partially deleted in new
chr12	86049674	86838904	chr12:86049674-86838904	0	-	86049674	86049674	8553170	6	49,63,109,65,33,239,	0,284390,385482,445576,677534,788991,
#Partially deleted in new
chr12	86068090	86256323	chr12:86068090-86256323	0	-	86068090	86068090	8553170	2	417,85,	0,188148,
#Partially deleted in new
chr12	86599577	86838998	chr12:86599577-86838998	3	-	86599577	86599577	8553170	3	84,33,333,	0,127631,239088,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	87041915	87042423	chr12:87041915-87042423	3	+	87041915	87041915	8553170	1	508,	0,
#Deleted in new
chr12	87169984	87170429	chr12:87169984-87170429	7	-	87169984	87169984	16724991	1	445,	0,
#Deleted in new
chr12	87746566	87746683	chr12:87746566-87746683	7	+	87746566	87746566	16724991	1	117,	0,
#Deleted in new
chr12	87750141	87750313	chr12:87750141-87750313	7	+	87750141	87750141	16724991	1	172,	0,
#Deleted in new
chr12	87753413	87753447	chr12:87753413-87753447	7	-	87753413	87753413	16724991	1	34,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	87782162	87783456	chr12:87782162-87783456	5	-	87782162	87782162	16724991	1	1294,	0,
#Deleted in new
chr12	87783117	87784568	chr12:87783117-87784568	7	-	87783117	87783117	16724991	1	1451,	0,
#Partially deleted in new
chr12	87795732	87802028	chr12:87795732-87802028	3	+	87795732	87795732	8553170	2	156,621,	0,5675,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	87816485	87817831	chr12:87816485-87817831	3	+	87816485	87816485	8553170	3	37,127,390,	0,626,956,
#Deleted in new
chr12	87820653	87820918	chr12:87820653-87820918	7	-	87820653	87820653	16724991	1	265,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	87944884	87950819	chr12:87944884-87950819	7	+	87944884	87944884	16724991	2	197,598,	0,5337,
#Partially deleted in new
chr12	87980034	88029412	chr12:87980034-88029412	3	-	87980330	88026962	789624	13	322,93,204,105,117,108,111,114,78,156,121,120,73,	0,3068,5815,6277,7815,9229,14598,16339,16534,18000,46453,46916,49305,
#Partially deleted in new
chr12	87980121	88029419	chr12:87980121-88029419	1	-	87980330	88026962	789624	12	235,93,204,105,108,111,114,78,156,121,120,80,	0,2981,5728,6190,9142,14511,16252,16447,17913,46366,46829,49218,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	87983380	88029369	chr12:87983380-88029369	0	-	87983380	87983380	8553170	10	2673,105,108,111,114,78,156,121,120,303,	0,2931,5883,11252,12993,13188,14654,43107,43570,45686,
#Partially deleted in new
chr12	87998034	88027963	chr12:87998034-88027963	0	-	87998034	88026962	789624	4	156,121,120,200,	0,28453,28916,29729,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	88027020	88034037	chr12:88027020-88034037	0	-	88027020	88027020	8553170	3	50,60,878,	0,3157,6139,
#Partially deleted in new
chr12	88033845	88046976	chr12:88033845-88046976	0	+	88033845	88033845	8553170	6	66,118,96,117,198,170,	0,6302,8979,9753,11736,12961,
#Partially deleted in new
chr12	88034131	88045602	chr12:88034131-88045602	0	+	88034131	88034131	8553170	5	156,118,96,117,21,	0,6016,8693,9467,11450,
#Partially deleted in new
chr12	88035445	88050160	chr12:88035445-88050160	3	+	88035648	88048422	789624	7	293,118,96,117,198,170,1927,	0,4702,7379,8153,10136,11361,12788,
#Partially deleted in new
chr12	88035504	88050158	chr12:88035504-88050158	0	+	88035648	88042851	789624	6	234,96,117,198,170,1925,	0,7320,8094,10077,11302,12729,
#Partially deleted in new
chr12	88035535	88049225	chr12:88035535-88049225	0	+	88035648	88042851	789624	5	203,96,117,170,992,	0,7289,8063,11271,12698,
#Partially deleted in new
chr12	88035537	88045787	chr12:88035537-88045787	0	+	88035648	88040178	789624	6	201,32,118,96,117,206,	0,504,4610,7287,8061,10044,
#Partially deleted in new
chr12	88035561	88046949	chr12:88035561-88046949	0	+	88035648	88042851	789624	5	177,96,117,198,143,	0,7263,8037,10020,11245,
#Partially deleted in new
chr12	88035609	88043838	chr12:88035609-88043838	0	+	88035609	88035609	8553170	4	129,118,96,240,	0,4538,7215,7989,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	88035751	88048457	chr12:88035751-88048457	0	+	88035751	88035751	8553170	6	290,118,96,2181,170,224,	0,4396,7073,7847,11055,12482,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	88041707	88048423	chr12:88041707-88048423	0	+	88041707	88041707	8553170	5	1213,117,198,170,190,	0,1891,3874,5099,6526,
#Partially deleted in new
chr12	88049013	88141307	chr12:88049013-88141307	1	-	88049183	88141307	789624	53	401,80,95,74,142,173,123,165,87,135,124,156,146,123,222,138,214,200,108,267,135,108,165,456,112,152,206,112,174,231,103,116,150,165,143,85,113,88,107,163,170,124,123,90,183,153,21,54,144,47,70,78,102,	0,1340,4638,5326,6562,9834,10884,11816,13678,14967,19508,22280,22767,28208,28683,30078,31168,34017,34833,35572,37025,37377,38766,40018,41714,43667,44756,47874,53824,57661,57982,60052,62188,62680,65406,66084,68019,69469,69623,71100,71983,76232,77302,79932,80680,81254,81531,82151,87629,90131,90481,91942,92192,
#Partially deleted in new
chr12	88049015	88104188	chr12:88049015-88104188	1	-	88049183	88103008	789624	29	399,80,95,74,142,173,123,165,87,135,124,156,146,123,222,138,214,200,108,267,135,108,165,456,112,152,206,112,1351,	0,1338,4636,5324,6560,9832,10882,11814,13676,14965,19506,22278,22765,28206,28681,30076,31166,34015,34831,35570,37023,37375,38764,40016,41712,43665,44754,47872,53822,
#Partially deleted in new
chr12	88049019	88142216	chr12:88049019-88142216	3	-	88049183	88141307	789624	54	395,80,95,74,142,173,123,165,87,135,124,156,146,123,222,138,214,200,108,267,135,108,165,456,112,152,206,112,174,231,103,116,150,165,143,85,113,88,101,163,170,124,123,90,183,153,21,54,144,47,70,78,129,317,	0,1334,4632,5320,6556,9828,10878,11810,13672,14961,19502,22274,22761,28202,28677,30072,31162,34011,34827,35566,37019,37371,38760,40012,41708,43661,44750,47868,53818,57655,57976,60046,62182,62674,65400,66078,68013,69463,69623,71094,71977,76226,77296,79926,80674,81248,81525,82145,87623,90125,90475,91936,92186,92880,
#Deleted in new
chr12	88051700	88051778	chr12:88051700-88051778	7	+	88051700	88051700	16724991	1	78,	0,
#Deleted in new
chr12	88057875	88058578	chr12:88057875-88058578	7	-	88057875	88057875	16724991	1	703,	0,
#Partially deleted in new
chr12	88093596	88129711	chr12:88093596-88129711	0	-	88093763	88129711	789624	20	379,112,174,231,103,116,150,165,143,85,93,113,88,101,163,170,124,123,90,18,	0,3291,9241,13078,13399,15469,17605,18097,20823,21501,21881,23436,24886,25046,26517,27400,31649,32719,35349,36097,
#Partially deleted in new
chr12	88109131	88141307	chr12:88109131-88141307	1	-	88109131	88141307	789624	23	27,21,150,165,143,85,113,88,107,163,170,124,123,90,183,153,21,54,144,47,70,78,102,	0,29,2070,2562,5288,5966,7901,9351,9505,10982,11865,16114,17184,19814,20562,21136,21413,22033,27511,30013,30363,31824,32074,
#Partially deleted in new
chr12	88111201	88141033	chr12:88111201-88141033	0	-	88111823	88141033	789624	19	150,165,85,113,88,101,163,170,124,123,90,183,153,21,54,144,47,70,78,	0,492,3896,5831,7281,7441,8912,9795,14044,15114,17744,18492,19066,19343,19963,25441,27943,28293,29754,
#Partially deleted in new
chr12	88130390	88142077	chr12:88130390-88142077	0	-	88130390	88141307	789624	8	30,21,144,47,70,78,129,178,	0,154,6252,8754,9104,10565,10815,11509,
#Partially deleted in new
chr12	88135657	88140994	chr12:88135657-88140994	0	-	88136618	88140994	789624	4	1129,47,70,39,	0,3487,3837,5298,
#Partially deleted in new
chr12	88142295	88199887	chr12:88142295-88199887	3	+	88148315	88195649	789624	14	192,217,219,100,116,173,253,149,121,112,104,170,227,5050,	0,5992,10995,11992,17818,18383,24034,30301,32311,33912,46547,48157,50308,52542,
#Partially deleted in new
chr12	88142295	88188908	chr12:88142295-88188908	0	+	88148315	88172987	789624	12	192,217,219,100,116,173,253,149,124,121,112,66,	0,5992,10995,11992,17818,18383,24034,30301,30670,32311,33912,46547,
#Partially deleted in new
chr12	88142295	88154324	chr12:88142295-88154324	0	+	88148315	88154324	789624	4	101,217,219,37,	0,5992,10995,11992,
#Partially deleted in new
chr12	88142306	88160710	chr12:88142306-88160710	0	+	88148315	88160710	789624	5	181,217,100,116,32,	0,5981,11981,17807,18372,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	88430441	88430550	chr12:88430441-88430550	3	+	88430441	88430441	8553170	1	109,	0,
#Partially deleted in new
chr12	88492792	88580851	chr12:88492792-88580851	1	-	88505195	88580278	0	9	4389,77,68,110,157,171,63,114,588,	0,12366,13518,14235,23541,25904,39648,52959,87471,
#Partially deleted in new
chr12	88492792	88534762	chr12:88492792-88534762	0	-	88492792	88492792	8553170	9	4389,77,68,110,84,157,171,63,72,	0,12366,13518,14235,22741,23541,25904,39648,41898,
#Partially deleted in new
chr12	88492792	88580471	chr12:88492792-88580471	3	-	88505195	88580278	0	10	4389,77,68,110,84,157,171,63,114,208,	0,12366,13518,14235,22741,23541,25904,39648,52959,87471,
#Partially deleted in new
chr12	88494470	88580301	chr12:88494470-88580301	0	-	88580104	88580278	789624	10	2711,77,68,110,84,157,171,63,114,213,	0,10688,11840,12557,21063,21863,24226,37970,51281,85618,
#Partially deleted in new
chr12	88496581	88580461	chr12:88496581-88580461	1	-	88505195	88580278	0	10	600,77,68,110,84,157,171,63,114,198,	0,8577,9729,10446,18952,19752,22115,35859,49170,83682,
#Partially deleted in new
chr12	88497079	88580471	chr12:88497079-88580471	1	-	88505195	88507090	789624	5	102,77,68,110,208,	0,8079,9231,9948,83184,
#Partially deleted in new
chr12	88518832	88580469	chr12:88518832-88580469	0	-	88518832	88532479	789624	5	35,63,114,137,206,	0,13608,26919,45375,61431,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	88580530	88598218	chr12:88580530-88598218	3	+	88580530	88580530	8553170	3	80,142,271,	0,1466,17417,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	88581638	88581796	chr12:88581638-88581796	3	+	88581638	88581638	8553170	1	158,	0,
#Deleted in new
chr12	88601861	88602195	chr12:88601861-88602195	3	+	88601861	88601861	8553170	1	334,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	89010680	89019679	chr12:89010680-89019679	3	-	89010680	89010680	789624	3	2637,177,127,	0,4011,8872,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	89027756	89028522	chr12:89027756-89028522	7	+	89027756	89027756	16724991	2	117,102,	0,664,
#Partially deleted in new
chr12	89048186	89309553	chr12:89048186-89309553	3	-	89048186	89048186	8553170	4	156,161,138,144,	0,2920,74751,261223,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	89282222	89282285	chr12:89282222-89282285	3	-	89282222	89282222	8553170	1	63,	0,
#Deleted in new
chr12	89319363	89319649	chr12:89319363-89319649	7	+	89319363	89319363	16724991	1	286,	0,
#Deleted in new
chr12	89347231	89353271	chr12:89347231-89353271	3	-	89349253	89352039	0	3	2330,438,1632,	0,3356,4408,
#Deleted in new
chr12	89348368	89352405	chr12:89348368-89352405	1	-	89349253	89352039	0	2	1193,766,	0,3271,
#Deleted in new
chr12	89349071	89351171	chr12:89349071-89351171	1	-	89349253	89351050	789624	2	490,584,	0,1516,
#Deleted in new
chr12	89349481	89351582	chr12:89349481-89351582	0	-	89349481	89349481	8553170	3	80,438,86,	0,1106,2015,
#Deleted in new
chr12	89351014	89353271	chr12:89351014-89353271	3	+	89351014	89351014	8553170	1	2257,	0,
#Deleted in new
chr12	89351688	89352497	chr12:89351688-89352497	0	-	89351688	89352039	789624	2	464,103,	0,706,
#Deleted in new
chr12	89367806	89369301	chr12:89367806-89369301	3	+	89367806	89367806	8553170	1	1495,	0,
#Deleted in new
chr12	89371819	89372359	chr12:89371819-89372359	3	+	89371819	89371819	8553170	1	540,	0,
#Partially deleted in new
chr12	89419717	89526024	chr12:89419717-89526024	3	-	89421152	89525895	789624	12	1540,219,81,153,69,134,116,108,180,172,85,144,	0,5443,39920,47052,47899,50643,51896,52450,72218,77453,105402,106163,
#Partially deleted in new
chr12	89419717	89525615	chr12:89419717-89525615	1	-	89421152	89491997	789624	10	1540,219,81,153,69,134,116,108,180,496,	0,5443,39920,47052,47899,50643,51896,52450,72218,105402,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	89419717	89429460	chr12:89419717-89429460	0	-	89419717	89419717	8553170	2	1540,4300,	0,5443,
#Partially deleted in new
chr12	89420786	89461842	chr12:89420786-89461842	0	-	89420786	89420786	8553170	3	471,219,221,	0,4374,40835,
#Partially deleted in new
chr12	89420895	89525563	chr12:89420895-89525563	1	-	89421152	89497316	789624	11	362,219,81,153,69,134,116,108,180,172,444,	0,4265,38742,45874,46721,49465,50718,51272,71040,76275,104224,
#Partially deleted in new
chr12	89421153	89526000	chr12:89421153-89526000	0	-	89492062	89525895	789624	12	104,219,81,23,153,69,134,116,108,180,85,120,	0,4007,38484,38862,45616,46463,49207,50460,51014,70782,103966,104727,
#Partially deleted in new
chr12	89425166	89525997	chr12:89425166-89525997	0	-	89492062	89525895	789624	6	213,81,153,180,85,117,	0,34471,41603,66769,99953,100714,
#Partially deleted in new
chr12	89425286	89525205	chr12:89425286-89525205	1	-	89466771	89491997	789624	5	93,153,69,180,86,	0,41483,42330,66649,99833,
#Partially deleted in new
chr12	89459670	89472695	chr12:89459670-89472695	0	-	89459670	89459670	8553170	8	48,23,153,69,134,116,108,115,	0,345,7099,7946,10690,11943,12497,12910,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	89460709	89525993	chr12:89460709-89525993	0	-	89460709	89460709	8553170	10	597,153,69,134,116,108,180,172,85,113,	0,6060,6907,9651,10904,11458,31226,36461,64410,65171,
#Partially deleted in new
chr12	89466672	89470405	chr12:89466672-89470405	0	-	89466672	89466672	8553170	3	250,69,45,	0,944,3688,
#Partially deleted in new
chr12	89466767	89525415	chr12:89466767-89525415	0	-	89466767	89466767	8553170	4	155,69,180,296,	0,849,25168,58352,
#Partially deleted in new
chr12	89485268	89526020	chr12:89485268-89526020	0	-	89492062	89525895	789624	4	68,180,85,140,	0,6667,39851,40612,
#Partially deleted in new
chr12	89492074	89526000	chr12:89492074-89526000	0	-	89497166	89525895	789624	4	41,304,85,120,	0,4964,33045,33806,
#Deleted in new
chr12	89500092	89502670	chr12:89500092-89502670	7	+	89500092	89500092	16724991	1	2578,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	89519407	89524806	chr12:89519407-89524806	3	-	89522812	89524549	0	1	5399,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	89519407	89526198	chr12:89519407-89526198	3	-	89522812	89525895	789624	3	5033,85,318,	0,5712,6473,
#Deleted in new
chr12	89521933	89526262	chr12:89521933-89526262	1	-	89523644	89525895	789624	3	1740,85,382,	0,3186,3947,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	89525653	89548005	chr12:89525653-89548005	3	+	89525653	89525653	8553170	2	143,7898,	0,14454,
#Deleted in new
chr12	89544202	89544488	chr12:89544202-89544488	3	-	89544202	89544202	8553170	1	286,	0,
#Partially deleted in new
chr12	89561128	89594878	chr12:89561128-89594878	3	+	89561128	89561128	8553170	2	147,1564,	0,32186,
#Partially deleted in new
chr12	89588048	89656111	chr12:89588048-89656111	1	-	89591269	89655886	789624	21	3247,154,183,108,212,214,192,107,88,180,238,242,243,215,162,39,141,126,255,198,433,	0,10541,11068,13277,14994,15663,16106,21888,22372,23144,28753,31950,33500,36134,38405,39629,42456,46729,46948,54109,67630,
#Partially deleted in new
chr12	89588050	89656067	chr12:89588050-89656067	1	-	89590983	89655886	789624	20	3245,183,108,212,214,192,107,88,180,238,242,243,215,162,39,141,126,255,198,389,	0,11066,13275,14992,15661,16104,21886,22370,23142,28751,31948,33498,36132,38403,39627,42454,46727,46946,54107,67628,
#Partially deleted in new
chr12	89588071	89708831	chr12:89588071-89708831	3	-	89590983	89655886	789624	21	3224,183,108,212,214,192,107,88,180,238,242,243,215,162,39,141,126,255,198,429,236,	0,11045,13254,14971,15640,16083,21865,22349,23121,28730,31927,33477,36111,38382,39606,42433,46706,46925,54086,67607,120524,
#Partially deleted in new
chr12	89590527	89603254	chr12:89590527-89603254	0	-	89590983	89603254	789624	5	768,87,183,108,212,	0,8129,8589,10798,12515,
#Partially deleted in new
chr12	89590841	89630754	chr12:89590841-89630754	1	-	89590983	89630661	789624	16	454,183,108,212,214,192,107,88,180,238,242,243,215,162,39,250,	0,8275,10484,12201,12870,13313,19095,19579,20351,25960,29157,30707,33341,35612,36836,39663,
#Partially deleted in new
chr12	89591102	89603152	chr12:89591102-89603152	0	-	89591102	89603152	789624	3	193,183,110,	0,8014,11940,
#Partially deleted in new
chr12	89601403	89603766	chr12:89601403-89603766	0	-	89601403	89601403	8553170	2	30,724,	0,1639,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	89603795	89610705	chr12:89603795-89610705	0	-	89603795	89603795	8553170	3	551,107,285,	0,6141,6625,
#Partially deleted in new
chr12	89603837	89612147	chr12:89603837-89612147	0	-	89603837	89603837	8553170	5	88,192,107,88,955,	0,317,6099,6583,7355,
#Partially deleted in new
chr12	89641822	89656019	chr12:89641822-89656019	0	-	89641822	89641822	8553170	2	533,341,	0,13856,
#Partially deleted in new
chr12	89655582	89709300	chr12:89655582-89709300	0	-	89655582	89655886	789624	2	525,82,	0,53636,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	89708958	89712590	chr12:89708958-89712590	3	+	89708958	89708958	789624	1	3632,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	89726935	89727042	chr12:89726935-89727042	7	+	89726935	89726935	16724991	1	107,	0,
#Deleted in new
chr12	89752912	89753831	chr12:89752912-89753831	7	+	89752912	89752912	16724991	1	919,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	89754058	89754152	chr12:89754058-89754152	3	+	89754058	89754058	8553170	1	94,	0,
#Partially deleted in new
chr12	89882664	89937143	chr12:89882664-89937143	3	+	89882664	89882664	8553170	4	227,103,166,51,	0,38402,53157,54428,
#Deleted in new
chr12	89919436	89919776	chr12:89919436-89919776	7	-	89919436	89919436	16724991	1	340,	0,
#Partially deleted in new
chr12	89919691	89989289	chr12:89919691-89989289	0	+	89919691	89919691	8553170	3	69,103,66,	0,1375,69532,
#Deleted in new
chr12	89947692	89949726	chr12:89947692-89949726	3	+	89947692	89947692	789624	3	60,88,252,	0,468,1782,
#Partially deleted in new
chr12	90107738	90112779	chr12:90107738-90112779	3	+	90107738	90107738	8553170	2	83,843,	0,4198,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	90293317	90300340	chr12:90293317-90300340	0	+	90293317	90293317	789624	3	243,136,142,	0,2039,6881,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	90293322	90296247	chr12:90293322-90296247	1	+	90293322	90293322	8553170	3	238,136,163,	0,2034,2762,
#Deleted in new
chr12	90617758	90622822	chr12:90617758-90622822	3	-	90617758	90617758	8553170	2	270,40,	0,5024,
#Partially deleted in new
chr12	90809275	90810680	chr12:90809275-90810680	3	+	90809275	90809275	8553170	2	742,159,	0,1246,
#Partially deleted in new
chr12	90905621	90955174	chr12:90905621-90955174	0	-	90905621	90905621	8553170	4	243,39,141,52,	0,35417,47157,49501,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	90918022	90948669	chr12:90918022-90948669	3	+	90918022	90918022	789624	5	28,83,212,68,1015,	0,20648,22126,28401,29632,
#Deleted in new
chr12	90952214	90955176	chr12:90952214-90955176	3	-	90953521	90954742	789624	1	2962,	0,
#Deleted in new
chr12	90952494	90953696	chr12:90952494-90953696	0	-	90953521	90953696	789624	2	425,258,	0,944,
#Partially deleted in new
chr12	90963678	91005026	chr12:90963678-91005026	3	-	90964155	91002565	789624	7	648,96,203,159,175,178,80,	0,6365,8121,9143,14409,38722,41268,
#Partially deleted in new
chr12	90971799	91005026	chr12:90971799-91005026	0	-	90971799	91002565	789624	5	203,159,175,173,80,	0,1022,6288,30601,33147,
#Partially deleted in new
chr12	90972555	91002469	chr12:90972555-91002469	0	-	90972555	90972555	8553170	3	425,175,69,	0,5532,29845,
#Partially deleted in new
chr12	91050490	91057983	chr12:91050490-91057983	3	-	91051345	91056281	789624	3	1028,894,240,	0,4905,7253,
#Partially deleted in new
chr12	91102628	91111831	chr12:91102628-91111831	3	-	91104164	91108979	789624	3	1691,883,434,	0,5489,8769,
#Partially deleted in new
chr12	91103582	91111486	chr12:91103582-91111486	0	-	91103582	91103582	8553170	3	737,166,89,	0,4535,7815,
#Partially deleted in new
chr12	91104138	91111439	chr12:91104138-91111439	0	-	91104138	91104138	8553170	3	181,570,42,	0,3979,7259,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	91140483	91183123	chr12:91140483-91183123	3	-	91146057	91178552	789624	8	5769,139,94,114,214,113,244,469,	0,11170,12612,16591,17812,24121,37858,42171,
#Partially deleted in new
chr12	91145258	91179582	chr12:91145258-91179582	1	-	91146057	91178552	789624	8	994,139,94,114,214,113,244,221,	0,6395,7837,11816,13037,19346,33083,34103,
#Partially deleted in new
chr12	91145258	91178552	chr12:91145258-91178552	1	-	91146057	91178552	789624	4	994,139,94,211,	0,6395,7837,33083,
#Deleted in new
chr12	91145525	91146208	chr12:91145525-91146208	0	-	91145724	91146208	789624	2	209,147,	0,536,
#Partially deleted in new
chr12	91145735	91182824	chr12:91145735-91182824	1	-	91146057	91178552	789624	9	517,139,94,114,214,113,244,325,170,	0,5918,7360,11339,12560,18869,32606,33626,36919,
#Partially deleted in new
chr12	91146057	91178552	chr12:91146057-91178552	1	-	91146057	91178552	789624	5	195,139,94,114,211,	0,5596,7038,11017,32284,
#Partially deleted in new
chr12	91146057	91178552	chr12:91146057-91178552	1	-	91146057	91178552	789624	3	195,113,211,	0,18547,32284,
#Partially deleted in new
chr12	91146057	91182805	chr12:91146057-91182805	1	-	91146057	91178552	789624	5	195,139,94,244,151,	0,5596,7038,32284,36597,
#Partially deleted in new
chr12	91146165	91179513	chr12:91146165-91179513	0	-	91146165	91178552	789624	5	87,139,94,244,152,	0,5488,6930,32176,33196,
#Partially deleted in new
chr12	91146235	91178552	chr12:91146235-91178552	1	-	91146235	91178552	789624	2	17,211,	0,32106,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	91150782	91153149	chr12:91150782-91153149	0	-	91151560	91153149	789624	2	1010,54,	0,2313,
#Partially deleted in new
chr12	91158295	91180365	chr12:91158295-91180365	0	-	91158295	91178552	789624	4	214,113,244,179,	0,6309,20046,21891,
#Partially deleted in new
chr12	91158297	91182652	chr12:91158297-91182652	0	-	91158297	91178552	789624	4	212,113,244,79,	0,6307,20044,24276,
#Partially deleted in new
chr12	91158311	91179355	chr12:91158311-91179355	0	-	91158311	91178552	789624	4	198,113,244,38,	0,6293,20030,21006,
#Partially deleted in new
chr12	91158475	91180976	chr12:91158475-91180976	0	-	91158475	91178552	789624	4	34,113,244,529,	0,6129,19866,21972,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	91169633	91179439	chr12:91169633-91179439	1	-	91169841	91178552	789624	3	264,244,78,	0,8708,9728,
#Deleted in new
chr12	91172141	91182709	chr12:91172141-91182709	1	-	91172782	91178552	789624	3	727,244,55,	0,6200,10513,
#Deleted in new
chr12	91172527	91179495	chr12:91172527-91179495	1	-	91172782	91178552	789624	3	341,244,134,	0,5814,6834,
#Deleted in new
chr12	91175117	91179533	chr12:91175117-91179533	1	-	91177533	91178552	789624	3	2508,244,172,	0,3224,4244,
#Deleted in new
chr12	91179198	91180481	chr12:91179198-91180481	0	-	91179198	91179198	8553170	2	534,34,	0,1249,
#Deleted in new
chr12	91193708	91193942	chr12:91193708-91193942	7	+	91193708	91193708	16724991	1	234,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	91362195	91368606	chr12:91362195-91368606	3	+	91362195	91362195	8553170	2	218,676,	0,5735,
#Deleted in new
chr12	91632911	91633023	chr12:91632911-91633023	3	-	91632911	91632911	8553170	1	112,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	91634886	91635644	chr12:91634886-91635644	3	+	91634886	91634886	8553170	1	758,	0,
#Deleted in new
chr12	91871121	91871230	chr12:91871121-91871230	7	-	91871121	91871121	16724991	1	109,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	91877390	91880655	chr12:91877390-91880655	3	+	91877390	91877390	8553170	2	99,1089,	0,2176,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	91901457	91906187	chr12:91901457-91906187	3	+	91901457	91901457	8553170	3	32,87,892,	0,377,3838,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	91984975	92141713	chr12:91984975-92141713	1	-	91984975	91984975	789624	6	1722,88,97,75,160,63,	0,2580,4121,5312,8394,156675,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	91985089	92142671	chr12:91985089-92142671	3	-	91985089	91985089	789624	5	1608,239,97,160,65,	0,2466,4007,8280,157517,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	91985777	92142668	chr12:91985777-92142668	0	-	91985777	91985777	789624	5	920,88,97,160,62,	0,1778,3319,7592,156829,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	91985777	92142668	chr12:91985777-92142668	0	-	91985777	91985777	789624	5	920,111,97,160,62,	0,1755,3319,7592,156829,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	91985777	92142668	chr12:91985777-92142668	0	-	91985777	91985777	789624	6	920,88,97,75,160,62,	0,1778,3319,4510,7592,156829,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	91988322	91993529	chr12:91988322-91993529	0	-	91988322	91988322	8553170	4	120,97,79,160,	0,774,1961,5047,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	91988386	92142831	chr12:91988386-92142831	0	-	91988386	91988386	8553170	4	56,97,160,225,	0,710,4983,154220,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	91993084	92028257	chr12:91993084-92028257	0	-	91993084	91993084	8553170	2	445,88,	0,35085,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	91993191	92137021	chr12:91993191-92137021	1	-	91993191	91993191	8553170	5	85,160,154,115,57,	0,178,51203,93358,143773,
#Deleted in new
chr12	92140277	92145897	chr12:92140277-92145897	3	-	92144079	92145535	789624	2	4170,510,	0,5110,
#Deleted in new
chr12	92141038	92142914	chr12:92141038-92142914	0	-	92141038	92141038	8553170	2	132,308,	0,1568,
#Deleted in new
chr12	92144117	92145233	chr12:92144117-92145233	0	-	92144117	92144370	789624	2	330,174,	0,942,
#Partially deleted in new
chr12	92145572	92167560	chr12:92145572-92167560	1	+	92145572	92145572	789624	3	1190,266,442,	0,3724,21546,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	92146180	92189660	chr12:92146180-92189660	3	+	92146180	92146180	8553170	3	63,101,5535,	0,481,37945,
#Deleted in new
chr12	92146446	92146918	chr12:92146446-92146918	0	+	92146446	92146446	8553170	1	472,	0,
#Deleted in new
chr12	92168399	92168877	chr12:92168399-92168877	7	+	92168399	92168399	16724991	1	478,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	92170352	92170453	chr12:92170352-92170453	3	-	92170352	92170352	8553170	1	101,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	92247755	92363832	chr12:92247755-92363832	3	-	92247755	92247755	8553170	5	274,59,81,144,242,	0,21165,24780,109775,115835,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	92420093	92428146	chr12:92420093-92428146	3	-	92421009	92428146	789624	4	367,175,90,52,	0,905,2453,8001,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	92420093	92428148	chr12:92420093-92428148	0	-	92420093	92420093	8553170	4	367,175,90,54,	0,905,2453,8001,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	92421530	92430988	chr12:92421530-92430988	0	+	92421530	92421530	789624	3	305,557,1955,	0,3847,7503,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	92421530	92483680	chr12:92421530-92483680	3	+	92421530	92421530	8553170	2	305,1663,	0,60487,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	92421530	92431002	chr12:92421530-92431002	0	+	92421530	92421530	789624	2	305,1969,	0,7503,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	92421530	92423949	chr12:92421530-92423949	0	+	92421530	92421530	8553170	1	2419,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	92423958	92430954	chr12:92423958-92430954	3	+	92423958	92423958	8553170	2	1976,1921,	0,5075,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	92423958	92426380	chr12:92423958-92426380	0	+	92423958	92423958	8553170	1	2422,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	92466450	92492091	chr12:92466450-92492091	3	+	92466450	92466450	8553170	2	552,10074,	0,15567,
#Deleted in new
chr12	92530459	92531324	chr12:92530459-92531324	7	+	92530459	92530459	16724991	1	865,	0,
#Partially deleted in new
chr12	92702842	92708547	chr12:92702842-92708547	1	+	92706631	92707715	789624	3	290,668,898,	0,3628,4807,
#Partially deleted in new
chr12	92703027	92708549	chr12:92703027-92708549	1	+	92706631	92707153	789624	2	105,2079,	0,3443,
#Partially deleted in new
chr12	92706470	92772455	chr12:92706470-92772455	3	+	92706631	92770195	789624	16	668,23,128,41,96,144,96,102,114,175,116,94,80,154,98,2368,	0,1179,22522,25762,30011,30907,34382,35020,39007,47619,49354,49827,55281,57570,62512,63617,
#Partially deleted in new
chr12	92707649	92772455	chr12:92707649-92772455	0	+	92707649	92721427	8553170	16	23,139,128,41,96,144,96,102,114,175,116,94,80,154,98,2368,	0,13735,21343,24583,28832,29728,33203,33841,37828,46440,48175,48648,54102,56391,61333,62438,
#Partially deleted in new
chr12	92732265	92749723	chr12:92732265-92749723	0	+	92732265	92749616	789624	7	8,96,144,96,102,114,173,	0,4216,5112,8587,9225,13212,17285,
#Partially deleted in new
chr12	92736488	92772092	chr12:92736488-92772092	1	+	92737518	92770195	789624	12	89,144,96,102,114,175,116,94,80,154,98,2005,	0,889,4364,5002,8989,17601,19336,19809,25263,27552,32494,33599,
#Partially deleted in new
chr12	92770636	92929331	chr12:92770636-92929331	3	-	92776010	92929066	0	29	5497,99,121,239,186,132,186,183,195,102,331,140,156,114,201,204,120,150,339,117,156,122,114,40,66,55,128,93,289,	0,6207,6906,7304,8478,9643,11313,17230,28255,30963,31767,38380,40642,42343,45563,48671,55529,57275,61875,71828,80474,81538,82275,83278,86638,86794,94223,120992,158406,
#Partially deleted in new
chr12	92802664	92929327	chr12:92802664-92929327	0	-	92857479	92929066	789624	18	70,140,156,114,201,204,120,150,339,117,156,122,114,40,66,55,93,285,	0,6352,8614,10315,13535,16643,23501,25247,29847,39800,48446,49510,50247,51250,54610,54766,88964,126378,
#Partially deleted in new
chr12	92813003	92821099	chr12:92813003-92821099	0	-	92813003	92816237	789624	4	90,201,204,47,	0,3196,6304,8049,
#Deleted in new
chr12	92858078	92859273	chr12:92858078-92859273	7	+	92858078	92858078	16724991	1	1195,	0,
#Partially deleted in new
chr12	92883772	92884700	chr12:92883772-92884700	7	+	92883772	92883772	16724991	1	928,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	92952638	92952745	chr12:92952638-92952745	3	+	92952638	92952638	8553170	1	107,	0,
#Partially deleted in new
chr12	93003414	93006257	chr12:93003414-93006257	1	+	93003414	93003414	8553170	2	559,164,	0,2679,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	93003414	93139132	chr12:93003414-93139132	3	-	93003414	93003414	8553170	3	409,85,85,	0,1099,135633,
#Deleted in new
chr12	93021605	93021712	chr12:93021605-93021712	3	+	93021605	93021605	8553170	1	107,	0,
#Deleted in new
chr12	93035260	93035744	chr12:93035260-93035744	7	+	93035260	93035260	16724991	1	484,	0,
#Deleted in new
chr12	93083597	93083675	chr12:93083597-93083675	7	-	93083597	93083597	16724991	1	78,	0,
#Deleted in new
chr12	93124062	93124543	chr12:93124062-93124543	7	-	93124062	93124062	16724991	1	481,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	93127663	93139091	chr12:93127663-93139091	1	-	93127663	93127663	8553170	3	463,146,44,	0,3324,11384,
#Partially deleted in new
chr12	93174365	93181832	chr12:93174365-93181832	3	+	93174365	93174365	789624	3	611,130,528,	0,1534,6939,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	93179657	93215674	chr12:93179657-93215674	1	-	93179657	93179657	8553170	4	405,146,77,93,	0,10609,11795,35924,
#Deleted in new
chr12	93266016	93266096	chr12:93266016-93266096	3	+	93266016	93266016	8553170	1	80,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	93314808	93315941	chr12:93314808-93315941	7	+	93314808	93314808	16724991	1	1133,	0,
#Deleted in new
chr12	93315570	93315703	chr12:93315570-93315703	5	+	93315570	93315570	16724991	1	133,	0,
#Partially deleted in new
chr12	93327995	93377708	chr12:93327995-93377708	0	-	93327995	93327995	8553170	2	60,272,	0,49441,
#Partially deleted in new
chr12	93328026	93377736	chr12:93328026-93377736	0	-	93328026	93328026	8553170	2	29,300,	0,49410,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	93377882	93408146	chr12:93377882-93408146	3	+	93378322	93399379	0	5	539,111,45,88,8970,	0,16726,17606,20885,21294,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	93377895	93403248	chr12:93377895-93403248	1	+	93378322	93399379	0	5	526,111,45,85,4072,	0,16713,17593,20875,21281,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	93378549	93402301	chr12:93378549-93402301	1	+	93394665	93399379	789624	5	241,111,45,85,3125,	0,16059,16939,20221,20627,
#Partially deleted in new
chr12	93378549	93399278	chr12:93378549-93399278	0	+	93394665	93399278	789624	6	144,44,111,45,85,102,	0,2438,16059,16939,20221,20627,
#Partially deleted in new
chr12	93378577	93400138	chr12:93378577-93400138	1	+	93394665	93399379	0	5	213,111,45,88,962,	0,16031,16911,20190,20599,
#Partially deleted in new
chr12	93378577	93399584	chr12:93378577-93399584	1	+	93394665	93399379	789624	5	116,111,45,85,408,	0,16031,16911,20193,20599,
#Partially deleted in new
chr12	93378653	93399329	chr12:93378653-93399329	0	+	93394665	93399329	789624	6	135,40,111,45,85,153,	0,6469,15955,16835,20117,20523,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	93405672	93407323	chr12:93405672-93407323	0	-	93405672	93405672	8553170	2	315,177,	0,1474,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	93405689	93442262	chr12:93405689-93442262	3	-	93410038	93441884	0	4	4390,141,247,408,	0,5044,5363,36165,
#Partially deleted in new
chr12	93408370	93441943	chr12:93408370-93441943	1	-	93410870	93441884	789624	2	2929,89,	0,33484,
#Partially deleted in new
chr12	93409741	93441256	chr12:93409741-93441256	1	-	93410038	93411140	789624	5	338,141,247,121,113,	0,992,1311,14528,31402,
#Partially deleted in new
chr12	93409762	93441898	chr12:93409762-93441898	0	-	93410814	93441884	789624	4	317,141,174,44,	0,971,1363,32092,
#Partially deleted in new
chr12	93409800	93441935	chr12:93409800-93441935	1	-	93410038	93441884	789624	3	279,247,81,	0,1252,32054,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	93460724	93460826	chr12:93460724-93460826	3	-	93460724	93460724	8553170	1	102,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	93467487	93516213	chr12:93467487-93516213	3	+	93469285	93501221	0	6	67,164,64,85,164,15038,	0,1704,9466,11900,20009,33688,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	93467515	93501576	chr12:93467515-93501576	1	+	93469285	93501221	0	6	39,167,64,85,164,401,	0,1673,9438,11872,19981,33660,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	93467516	93502652	chr12:93467516-93502652	1	+	93469285	93501221	789624	6	38,164,64,85,164,1468,	0,1675,9437,11871,19980,33668,
#Partially deleted in new
chr12	93467516	93501291	chr12:93467516-93501291	0	+	93467516	93467516	8553170	5	38,164,85,164,116,	0,1675,11871,19980,33659,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	93467517	93502661	chr12:93467517-93502661	0	+	93469285	93470571	789624	7	37,164,105,64,85,164,1486,	0,1674,2968,9436,11870,19979,33658,
#Partially deleted in new
chr12	93467517	93488472	chr12:93467517-93488472	1	+	93469285	93488373	789624	6	37,167,64,85,164,184,	0,1671,9436,11870,19979,20771,
#Partially deleted in new
chr12	93467539	93501385	chr12:93467539-93501385	0	+	93469285	93479395	789624	7	15,167,20,64,85,164,210,	0,1649,2946,9414,11848,19957,33636,
#Partially deleted in new
chr12	93469188	93502864	chr12:93469188-93502864	0	+	93469285	93501221	0	6	167,64,85,164,136,159,	0,7765,10199,18308,31987,33517,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	93469213	93487897	chr12:93469213-93487897	1	+	93469285	93487664	789624	4	142,64,85,401,	0,7740,10174,18283,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	93500746	93502621	chr12:93500746-93502621	0	+	93500746	93500746	8553170	2	282,717,	0,1158,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	93509486	93509768	chr12:93509486-93509768	3	+	93509486	93509486	8553170	1	282,	0,
#Deleted in new
chr12	93529559	93529989	chr12:93529559-93529989	7	-	93529559	93529559	16724991	1	430,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	93542462	93571768	chr12:93542462-93571768	3	-	93542462	93542462	8553170	3	2896,227,202,	0,24281,29104,
#Partially deleted in new
chr12	93551432	93567179	chr12:93551432-93567179	0	-	93551432	93551432	8553170	4	80,132,227,116,	0,14180,15311,15631,
#Partially deleted in new
chr12	93565583	93571398	chr12:93565583-93571398	1	-	93565583	93565583	789624	4	161,227,96,134,	0,1160,1480,5681,
#Deleted in new
chr12	93569813	93576745	chr12:93569813-93576745	3	+	93572897	93575179	0	3	385,352,2024,	0,2871,4908,
#Deleted in new
chr12	93570398	93576174	chr12:93570398-93576174	1	+	93572897	93575179	0	3	267,352,1453,	0,2286,4323,
#Deleted in new
chr12	93570979	93575197	chr12:93570979-93575197	1	+	93572897	93575179	0	3	237,352,476,	0,1705,3742,
#Deleted in new
chr12	93571323	93575010	chr12:93571323-93575010	0	+	93572897	93575010	789624	3	103,352,289,	0,1361,3398,
#Deleted in new
chr12	93571360	93576206	chr12:93571360-93576206	1	+	93572897	93575179	0	3	554,352,1485,	0,1324,3361,
#Deleted in new
chr12	93571680	93576744	chr12:93571680-93576744	1	+	93572897	93575179	0	3	506,352,2023,	0,1004,3041,
#Deleted in new
chr12	93571703	93576206	chr12:93571703-93576206	1	+	93572897	93573206	789624	2	211,3522,	0,981,
#Deleted in new
chr12	93571899	93575066	chr12:93571899-93575066	0	+	93572897	93575066	789624	3	287,352,345,	0,785,2822,
#Deleted in new
chr12	93571905	93575306	chr12:93571905-93575306	1	+	93572897	93575179	0	2	1131,585,	0,2816,
#Deleted in new
chr12	93572134	93572905	chr12:93572134-93572905	0	+	93572897	93572905	8553170	2	241,221,	0,550,
#Deleted in new
chr12	93574964	93576019	chr12:93574964-93576019	0	+	93574964	93575650	789624	2	209,510,	0,545,
#Partially deleted in new
chr12	93575057	93583487	chr12:93575057-93583487	0	+	93575057	93583046	789624	2	116,465,	0,7965,
#Partially deleted in new
chr12	93640821	93641586	chr12:93640821-93641586	7	-	93640821	93640821	16724991	1	765,	0,
#Partially deleted in new
chr12	93677374	93850736	chr12:93677374-93850736	3	+	93678774	93850271	0	3	98,304,767,	0,1394,172595,
#Partially deleted in new
chr12	93677374	93846527	chr12:93677374-93846527	0	+	93677374	93677374	8553170	4	98,304,68,44,	0,1394,113314,169109,
#Partially deleted in new
chr12	93677374	93738636	chr12:93677374-93738636	1	+	93678774	93738294	789624	3	98,304,437,	0,1394,60825,
#Partially deleted in new
chr12	93677376	93738625	chr12:93677376-93738625	1	+	93678774	93738453	789624	3	96,304,222,	0,1392,61027,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	93677398	93894727	chr12:93677398-93894727	1	+	93678774	93894117	789624	3	74,304,678,	0,1370,216651,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	93677398	93894840	chr12:93677398-93894840	0	+	93678774	93859332	0	4	74,304,124,791,	0,1370,181920,216651,
#Partially deleted in new
chr12	93677716	93850756	chr12:93677716-93850756	1	+	93678774	93850271	0	3	312,304,787,	0,1052,172253,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	93707790	93737823	chr12:93707790-93737823	3	-	93707790	93707790	789624	3	1293,169,125,	0,27774,29908,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	93714534	93735730	chr12:93714534-93735730	0	-	93714534	93714534	8553170	2	362,166,	0,21030,
#Partially deleted in new
chr12	93733558	93738636	chr12:93733558-93738636	0	+	93733558	93733558	8553170	2	96,437,	0,4641,
#Partially deleted in new
chr12	93815407	93850667	chr12:93815407-93850667	0	+	93815407	93815407	8553170	2	74,698,	0,34562,
#Partially deleted in new
chr12	93826718	93850695	chr12:93826718-93850695	0	+	93826718	93826718	8553170	2	98,726,	0,23251,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	93831075	93831372	chr12:93831075-93831372	3	+	93831075	93831075	8553170	1	297,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	93836166	93838038	chr12:93836166-93838038	3	+	93836166	93836166	8553170	2	31,748,	0,1124,
#Partially deleted in new
chr12	93848659	93850756	chr12:93848659-93850756	0	+	93848659	93848659	8553170	2	683,787,	0,1310,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	93894964	93943603	chr12:93894964-93943603	3	-	93894964	93894964	789624	3	401,80,59,	0,13961,48580,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	93945040	93947813	chr12:93945040-93947813	3	+	93945040	93945040	8553170	1	2773,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	94008738	94009047	chr12:94008738-94009047	3	-	94008738	94008738	8553170	1	309,	0,
#Deleted in new
chr12	94140076	94141337	chr12:94140076-94141337	7	+	94140076	94140076	16724991	1	1261,	0,
#Partially deleted in new
chr12	94148722	94307675	chr12:94148722-94307675	3	+	94148971	94305285	0	31	1311,141,135,101,115,148,88,103,87,140,180,88,204,186,103,102,104,39,125,199,147,178,104,55,32,108,164,148,141,75,2495,	0,20430,32723,37650,60867,71293,75505,77882,78426,88941,91762,95215,99180,99504,102703,106064,106470,110614,110887,111919,116356,130749,133575,145763,148466,148593,149909,152187,155033,155254,156458,
#Partially deleted in new
chr12	94150831	94186765	chr12:94150831-94186765	0	+	94150831	94150831	8553170	4	36,141,135,393,	0,18321,30614,35541,
#Partially deleted in new
chr12	94158100	94209629	chr12:94158100-94209629	0	+	94169242	94209629	789624	5	110,141,135,101,40,	0,11052,23345,28272,51489,
#Partially deleted in new
chr12	94168005	94176404	chr12:94168005-94176404	0	-	94168005	94168005	8553170	2	346,24,	0,8375,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	94168008	94186044	chr12:94168008-94186044	3	-	94168008	94168008	8553170	2	343,103,	0,17933,
#Partially deleted in new
chr12	94226488	94227453	chr12:94226488-94227453	0	+	94226488	94226488	8553170	2	219,305,	0,660,
#Partially deleted in new
chr12	94248361	94256285	chr12:94248361-94256285	0	+	94248361	94248361	8553170	5	51,103,102,104,382,	0,3064,6425,6831,7542,
#Partially deleted in new
chr12	94254477	94304325	chr12:94254477-94304325	0	+	94254536	94300963	789624	15	63,102,104,39,125,199,147,178,104,55,32,108,148,141,349,	0,309,715,4859,5132,6164,10601,24994,27820,40008,42711,42838,46432,49278,49499,
#Partially deleted in new
chr12	94254517	94259691	chr12:94254517-94259691	0	+	94254764	94259691	789624	3	371,104,82,	0,675,5092,
#Partially deleted in new
chr12	94254527	94305655	chr12:94254527-94305655	1	+	94254764	94305285	789624	16	361,104,39,125,199,147,178,104,55,32,108,164,148,141,75,475,	0,665,4809,5082,6114,10551,24944,27770,39958,42661,42788,44104,46382,49228,49449,50653,
#Partially deleted in new
chr12	94259385	94265094	chr12:94259385-94265094	0	+	94259385	94259385	8553170	3	349,199,16,	0,1256,5693,
#Partially deleted in new
chr12	94262520	94305598	chr12:94262520-94305598	1	+	94282305	94305285	789624	12	243,147,178,104,55,32,108,164,148,141,75,418,	0,2558,16951,19777,31965,34668,34795,36111,38389,41235,41456,42660,
#Partially deleted in new
chr12	94265130	94279986	chr12:94265130-94279986	0	+	94265130	94265130	8553170	2	95,515,	0,14341,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	94272149	94277195	chr12:94272149-94277195	3	-	94272149	94272149	8553170	2	230,263,	0,4783,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	94277757	94280180	chr12:94277757-94280180	1	-	94277757	94277757	8553170	2	380,416,	0,2007,
#Partially deleted in new
chr12	94279818	94282844	chr12:94279818-94282844	3	-	94279818	94279818	8553170	3	81,281,39,	0,2016,2987,
#Partially deleted in new
chr12	94306448	94331798	chr12:94306448-94331798	0	-	94308812	94331798	789624	5	177,135,190,104,99,	0,2334,3469,6465,25251,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr12	94307695	94459952	chr12:94307695-94459952	3	-	94308812	94412490	789624	17	1222,190,104,130,158,76,150,145,115,132,252,132,93,151,274,53,396,	0,2222,5218,24004,25786,27893,60098,60361,62226,68190,71095,93154,95474,104001,104622,127579,151861,
#Partially deleted in new
chr12	94308279	94459946	chr12:94308279-94459946	1	-	94308812	94412490	789624	16	638,190,104,130,158,76,150,145,115,132,252,132,93,151,274,390,	0,1638,4634,23420,25202,27309,59514,59777,61642,67606,70511,92570,94890,103417,104038,151277,
#Partially deleted in new
chr12	94308285	94412595	chr12:94308285-94412595	1	-	94312917	94403199	789624	16	632,190,16,87,130,158,76,150,145,115,132,252,132,93,151,278,	0,1632,4628,4645,23414,25196,27303,59508,59771,61636,67600,70505,92564,94884,103411,104032,
#Partially deleted in new
chr12	94308826	94313178	chr12:94308826-94313178	0	-	94308826	94308826	8553170	3	91,190,265,	0,1091,4087,
#Partially deleted in new
chr12	94309992	94459678	chr12:94309992-94459678	0	-	94328209	94412391	789624	17	115,104,104,130,158,76,150,145,115,132,252,132,93,151,112,75,122,	0,2921,18212,21707,23489,25596,57801,58064,59929,65893,68798,90857,93177,101704,102325,102524,149564,
#Partially deleted in new
chr12	94331685	94335848	chr12:94331685-94335848	0	-	94331685	94331685	8553170	3	144,193,260,	0,1796,3903,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	94361219	94361526	chr12:94361219-94361526	3	+	94361219	94361219	8553170	1	307,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	94368397	94459952	chr12:94368397-94459952	1	-	94369910	94412490	789624	9	1639,132,252,132,93,151,274,53,396,	0,7488,10393,32452,34772,43299,43920,66877,91159,
#Partially deleted in new
chr12	94378791	94401121	chr12:94378791-94401121	0	-	94378791	94378791	8553170	2	251,272,	0,22058,
#Deleted in new
chr12	94400903	94402336	chr12:94400903-94402336	0	-	94400903	94400903	8553170	3	78,77,86,	0,301,1347,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	94402778	94408097	chr12:94402778-94408097	0	-	94402778	94402778	8553170	2	484,81,	0,5238,
#Partially deleted in new
chr12	94402977	94412512	chr12:94402977-94412512	0	-	94402977	94402977	8553170	3	285,151,195,	0,8719,9340,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	94412483	94459988	chr12:94412483-94459988	0	-	94412483	94412490	8553170	4	108,51,53,432,	0,21519,22791,47073,
#Partially deleted in new
chr12	94423743	94424969	chr12:94423743-94424969	7	-	94423743	94423743	16724991	1	1226,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	94460002	94462484	chr12:94460002-94462484	3	+	94460002	94460002	789624	1	2482,	0,
#Partially deleted in new
chr12	94491545	94496442	chr12:94491545-94496442	3	-	94491545	94491545	8553170	2	382,38,	0,4859,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	94515475	94515760	chr12:94515475-94515760	3	+	94515475	94515475	8553170	1	285,	0,
#Deleted in new
chr12	94521089	94521869	chr12:94521089-94521869	7	-	94521089	94521089	16724991	1	780,	0,
#Deleted in new
chr12	94548240	94549536	chr12:94548240-94549536	7	+	94548240	94548240	16724991	1	1296,	0,
#Deleted in new
chr12	94561788	94561859	chr12:94561788-94561859	3	+	94561788	94561788	5263520	1	71,	0,
#Partially deleted in new
chr12	94567123	94650562	chr12:94567123-94650562	3	-	94571434	94650430	789624	4	4614,136,917,210,	0,11270,14498,83229,
#Partially deleted in new
chr12	94568568	94616061	chr12:94568568-94616061	1	-	94571434	94582523	789624	4	3169,136,917,139,	0,9825,13053,47354,
#Deleted in new
chr12	94571230	94571352	chr12:94571230-94571352	3	-	94571230	94571230	5263520	1	122,	0,
#Partially deleted in new
chr12	94582126	94616420	chr12:94582126-94616420	0	-	94582126	94582523	789624	2	412,71,	0,34223,
#Deleted in new
chr12	94590820	94591093	chr12:94590820-94591093	7	+	94590820	94590820	16724991	1	273,	0,
#Deleted in new
chr12	94834146	94835158	chr12:94834146-94835158	7	+	94834146	94834146	16724991	1	1012,	0,
#Deleted in new
chr12	94834397	94834513	chr12:94834397-94834513	3	+	94834397	94834397	5263520	1	116,	0,
#Deleted in new
chr12	94834453	94835028	chr12:94834453-94835028	4	+	94834453	94834453	16724991	1	575,	0,
#Partially deleted in new
chr12	94897054	95003660	chr12:94897054-95003660	0	-	94928249	95003660	789624	5	256,161,247,83,66,	0,27591,30962,105684,106540,
#Partially deleted in new
chr12	94897091	94924806	chr12:94897091-94924806	0	-	94897091	94897091	8553170	3	219,111,161,	0,13141,27554,
#Partially deleted in new
chr12	94971331	95003700	chr12:94971331-95003700	1	-	94971419	95003680	789624	3	154,16,106,	0,31474,32263,
#Partially deleted in new
chr12	94971331	94997447	chr12:94971331-94997447	0	-	94971331	94971331	8553170	3	289,88,140,	0,22838,25976,
#Partially deleted in new
chr12	94971332	95003770	chr12:94971332-95003770	3	-	94971439	95003680	0	4	288,88,83,176,	0,22837,31406,32262,
#Partially deleted in new
chr12	94971332	94994353	chr12:94971332-94994353	0	-	94971332	94971332	8553170	2	288,184,	0,22837,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	94971332	95003608	chr12:94971332-95003608	0	-	94996929	95003608	789624	5	288,88,73,83,14,	0,22837,25571,31406,32262,
#Partially deleted in new
chr12	94971335	95003713	chr12:94971335-95003713	1	-	94971597	95003680	0	3	285,83,119,	0,31403,32259,
#Partially deleted in new
chr12	94971477	95003748	chr12:94971477-95003748	0	-	94972446	95003680	789624	5	143,95,88,83,154,	0,917,22692,31261,32117,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	95020228	95073703	chr12:95020228-95073703	3	-	95022228	95067384	789624	14	2175,106,138,140,122,166,182,91,148,180,79,231,61,324,	0,4921,8158,11120,20247,28839,31533,37324,37502,38081,39677,42279,47102,53151,
#Partially deleted in new
chr12	95021892	95040598	chr12:95021892-95040598	0	-	95025158	95040598	789624	3	511,106,123,	0,3257,18583,
#Partially deleted in new
chr12	95021892	95073569	chr12:95021892-95073569	0	-	95021892	95021892	8553170	11	511,106,123,166,182,91,759,79,231,61,190,	0,3257,6494,27175,29869,35660,35838,38013,40615,45438,51487,
#Partially deleted in new
chr12	95021920	95025349	chr12:95021920-95025349	0	-	95021920	95021920	8553170	2	483,200,	0,3229,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	95022333	95049492	chr12:95022333-95049492	0	-	95022333	95022333	8553170	5	70,106,123,140,425,	0,2816,6053,9015,26734,
#Partially deleted in new
chr12	95026832	95057757	chr12:95026832-95057757	0	-	95026832	95026832	8553170	6	36,138,140,182,91,27,	0,1554,4516,24929,30720,30898,
#Partially deleted in new
chr12	95028105	95031394	chr12:95028105-95031394	0	-	95028105	95028105	8553170	2	419,46,	0,3243,
#Partially deleted in new
chr12	95028457	95067384	chr12:95028457-95067384	0	-	95028457	95028457	8553170	10	52,122,166,182,91,148,180,79,231,54,	0,12018,20610,23304,29095,29273,29852,31448,34050,38873,
#Partially deleted in new
chr12	95028457	95073628	chr12:95028457-95073628	1	-	95028457	95067384	789624	11	52,122,166,182,91,148,180,79,231,61,249,	0,12018,20610,23304,29095,29273,29852,31448,34050,38873,44922,
#Partially deleted in new
chr12	95030408	95073580	chr12:95030408-95073580	1	-	95030618	95067384	789624	12	221,140,122,166,182,91,148,180,79,231,61,201,	0,940,10067,18659,21353,27144,27322,27901,29497,32099,36922,42971,
#Partially deleted in new
chr12	95030408	95051869	chr12:95030408-95051869	0	-	95040563	95051869	789624	4	221,140,122,108,	0,940,10067,21353,
#Partially deleted in new
chr12	95030417	95073537	chr12:95030417-95073537	1	-	95030814	95067384	789624	12	456,140,122,166,182,91,148,180,79,231,61,158,	0,931,10058,18650,21344,27135,27313,27892,29488,32090,36913,42962,
#Partially deleted in new
chr12	95049127	95058393	chr12:95049127-95058393	0	-	95049127	95049127	8553170	5	106,182,91,148,46,	0,2634,8425,8603,9220,
#Partially deleted in new
chr12	95058352	95073510	chr12:95058352-95073510	0	-	95058352	95058352	8553170	4	137,231,61,131,	0,4155,8978,15027,
#Partially deleted in new
chr12	95058408	95073545	chr12:95058408-95073545	0	-	95058408	95058408	8553170	4	81,79,231,166,	0,1497,4099,14971,
#Partially deleted in new
chr12	95058419	95067370	chr12:95058419-95067370	0	-	95058419	95058419	8553170	4	70,231,38,40,	0,4088,4430,8911,
#Partially deleted in new
chr12	95059919	95073615	chr12:95059919-95073615	0	-	95059919	95059919	8553170	5	65,231,38,61,236,	0,2588,2930,7411,13460,
#Partially deleted in new
chr12	95066927	95073503	chr12:95066927-95073503	0	-	95066927	95066927	8553170	2	464,124,	0,6452,
#Partially deleted in new
chr12	95067336	95073017	chr12:95067336-95073017	0	-	95067336	95067384	789624	2	55,378,	0,5303,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr12	95076748	95217464	chr12:95076748-95217464	3	-	95081519	95217240	789624	21	4808,149,129,128,103,147,103,80,84,69,72,59,51,88,157,152,31,68,145,2425,240,	0,7749,9031,12820,14958,15950,17843,28258,30205,30814,31599,31754,36902,57990,60773,64639,76062,76177,95851,132094,140476,
#Partially deleted in new
chr12	95081169	95091787	chr12:95081169-95091787	0	-	95081493	95091787	789624	4	387,129,128,81,	0,4610,8399,10537,
#Partially deleted in new
chr12	95081397	95217482	chr12:95081397-95217482	0	-	95152974	95217240	789624	20	159,149,129,128,103,147,103,80,84,69,72,59,51,88,157,152,31,68,145,258,	0,3100,4382,8171,10309,11301,13194,23609,25556,26165,26950,27105,32253,53341,56124,59990,71413,71528,91202,135827,
#Partially deleted in new
chr12	95085542	95217464	chr12:95085542-95217464	1	-	95085761	95217240	789624	19	366,128,103,147,103,80,84,69,72,59,51,88,157,152,31,68,145,2425,240,	0,4026,6164,7156,9049,19464,21411,22020,22805,22960,28108,49196,51979,55845,67268,67383,87057,123300,131682,
#Partially deleted in new
chr12	95091706	95116973	chr12:95091706-95116973	0	-	95091706	95116907	789624	10	103,147,103,80,84,69,72,59,51,136,	0,992,2885,13300,15247,15856,16641,16796,21944,25131,
#Partially deleted in new
chr12	95092827	95217379	chr12:95092827-95217379	1	-	95092827	95217240	789624	16	18,103,80,84,69,72,59,51,88,157,152,31,68,145,2425,155,	0,1764,12179,14126,14735,15520,15675,20823,41911,44694,48560,59983,60098,79772,116015,124397,
#Deleted in new
chr12	95100530	95101045	chr12:95100530-95101045	7	+	95100530	95100530	16724991	1	515,	0,
#Partially deleted in new
chr12	95125759	95126389	chr12:95125759-95126389	7	+	95125759	95125759	16724991	1	630,	0,
#Partially deleted in new
chr12	95217745	95302790	chr12:95217745-95302790	3	+	95217850	95300673	789624	12	141,132,90,176,276,138,148,332,194,101,208,2626,	0,34194,39404,45160,48611,52305,56996,64567,69918,76526,78305,82419,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	95217745	95257181	chr12:95217745-95257181	0	+	95217745	95217745	8553170	6	141,151,69,105,73,32,	0,24418,26195,34221,38804,39404,
#Partially deleted in new
chr12	95217745	95263074	chr12:95217745-95263074	0	+	95217850	95256621	789624	6	141,132,73,90,43,169,	0,34194,38804,39404,40499,45160,
#Partially deleted in new
chr12	95217752	95287719	chr12:95217752-95287719	0	+	95217850	95266386	789624	7	134,132,276,150,144,332,56,	0,34187,48604,52286,56993,64560,69911,
#Partially deleted in new
chr12	95217760	95301172	chr12:95217760-95301172	0	+	95217850	95256621	789624	13	126,132,73,90,176,276,138,148,332,194,101,208,1008,	0,34179,38789,39389,45145,48596,52290,56981,64552,69903,76511,78290,82404,
#Partially deleted in new
chr12	95217761	95266489	chr12:95217761-95266489	0	+	95217850	95266489	789624	4	125,132,176,133,	0,34178,45144,48595,
#Partially deleted in new
chr12	95217763	95274891	chr12:95217763-95274891	0	+	95217850	95256621	789624	7	123,132,73,176,276,138,150,	0,34176,38786,45142,48593,52287,56978,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	95217779	95266484	chr12:95217779-95266484	0	+	95217779	95217779	8553170	6	107,101,132,90,176,128,	0,24384,34160,39370,45126,48577,
#Partially deleted in new
chr12	95217798	95301170	chr12:95217798-95301170	0	+	95217850	95266386	789624	10	88,132,276,138,148,47,194,101,208,1006,	0,34141,48558,52252,56943,64514,69865,76473,78252,82366,
#Partially deleted in new
chr12	95217807	95262412	chr12:95217807-95262412	0	+	95217850	95256621	789624	6	79,132,73,90,43,109,	0,34132,38742,39342,40437,44496,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	95217809	95266432	chr12:95217809-95266432	0	+	95217850	95266432	789624	6	77,57,132,90,176,76,	0,6370,34130,39340,45096,48547,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	95217810	95294184	chr12:95217810-95294184	0	+	95217810	95217810	8553170	10	76,132,90,176,276,150,148,332,194,501,	0,34129,39339,45095,48546,52228,56931,64502,69853,75873,
#Partially deleted in new
chr12	95217810	95270187	chr12:95217810-95270187	0	+	95217850	95256621	789624	8	76,132,73,90,176,52,276,149,	0,34129,38739,39339,45095,45935,48546,52228,
#Partially deleted in new
chr12	95217810	95252440	chr12:95217810-95252440	0	+	95217810	95217810	8553170	2	76,501,	0,34129,
#Partially deleted in new
chr12	95217810	95266435	chr12:95217810-95266435	0	+	95217810	95217810	8553170	6	76,132,90,38,176,79,	0,34129,39339,40434,45095,48546,
#Partially deleted in new
chr12	95217811	95266428	chr12:95217811-95266428	0	+	95217850	95258286	789624	6	75,132,90,43,176,72,	0,34128,39338,40433,45094,48545,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	95217811	95263073	chr12:95217811-95263073	0	+	95217850	95256621	789624	6	75,57,132,73,90,168,	0,6368,34128,38738,39338,45094,
#Partially deleted in new
chr12	95217811	95263081	chr12:95217811-95263081	0	+	95217850	95256621	789624	5	75,132,73,86,176,	0,34128,38738,39342,45094,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	95217811	95257239	chr12:95217811-95257239	0	+	95217811	95217811	8553170	6	75,101,69,132,73,90,	0,24352,26129,34128,38738,39338,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	95217811	95266589	chr12:95217811-95266589	0	+	95217811	95217811	8553170	7	75,101,132,73,90,176,233,	0,24352,34128,38738,39338,45094,48545,
#Partially deleted in new
chr12	95217811	95300921	chr12:95217811-95300921	0	+	95217850	95256621	789624	13	75,132,73,90,176,276,150,148,332,194,101,208,757,	0,34128,38738,39338,45094,48545,52227,56930,64501,69852,76460,78239,82353,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	95217817	95266384	chr12:95217817-95266384	0	+	95217850	95244009	789624	6	69,69,132,90,176,28,	0,26123,34122,39332,45088,48539,
#Partially deleted in new
chr12	95217817	95300654	chr12:95217817-95300654	0	+	95217850	95257165	789624	12	69,132,86,176,276,150,148,332,194,101,208,490,	0,34122,39336,45088,48539,52221,56924,64495,69846,76454,78233,82347,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	95217823	95296956	chr12:95217823-95296956	0	+	95217823	95217823	8553170	12	63,132,73,90,176,276,138,148,332,194,101,906,	0,34116,38726,39326,45082,48533,52227,56918,64489,69840,76448,78227,
#Partially deleted in new
chr12	95217825	95266406	chr12:95217825-95266406	0	+	95217850	95266406	789624	5	61,105,90,176,50,	0,34141,39324,45080,48531,
#Partially deleted in new
chr12	95217841	95287864	chr12:95217841-95287864	0	+	95217850	95266386	789624	7	45,132,276,150,148,47,201,	0,34098,48515,52197,56900,64471,69822,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	95218064	95301172	chr12:95218064-95301172	0	+	95218064	95218064	8553170	16	213,101,69,132,73,90,176,276,150,144,332,194,101,208,82,1008,	0,24099,25876,33875,38485,39085,44841,48292,51974,56681,64248,69599,76207,77986,80797,82100,
#Partially deleted in new
chr12	95218115	95263079	chr12:95218115-95263079	0	+	95218115	95218115	8553170	4	162,132,90,174,	0,33824,39034,44790,
#Partially deleted in new
chr12	95218128	95299436	chr12:95218128-95299436	0	+	95218128	95218128	8553170	3	149,132,343,	0,33811,80965,
#Partially deleted in new
chr12	95218228	95266507	chr12:95218228-95266507	0	+	95218228	95218228	8553170	4	117,132,176,151,	0,33711,44677,48128,
#Partially deleted in new
chr12	95218229	95263059	chr12:95218229-95263059	0	+	95256598	95263059	789624	5	116,132,73,90,154,	0,33710,38320,38920,44676,
#Partially deleted in new
chr12	95218253	95266424	chr12:95218253-95266424	0	+	95218253	95218253	8553170	5	92,132,90,176,68,	0,33686,38896,44652,48103,
#Partially deleted in new
chr12	95218254	95266633	chr12:95218254-95266633	0	+	95218254	95218254	8553170	4	91,132,73,277,	0,33685,38295,48102,
#Partially deleted in new
chr12	95218260	95266452	chr12:95218260-95266452	0	+	95256598	95266452	789624	5	85,132,73,176,96,	0,33679,38289,44645,48096,
#Partially deleted in new
chr12	95218309	95266475	chr12:95218309-95266475	0	+	95218309	95218309	8553170	5	304,132,90,176,119,	0,33630,38840,44596,48047,
#Partially deleted in new
chr12	95231411	95300634	chr12:95231411-95300634	0	+	95256598	95300634	789624	13	134,132,73,90,176,276,150,148,332,194,101,208,470,	0,20528,25138,25738,31494,34945,38627,43330,50901,56252,62860,64639,68753,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	95251944	95301172	chr12:95251944-95301172	0	+	95251944	95251944	8553170	12	127,73,90,176,276,138,148,332,194,101,208,2079,	0,4605,5205,10961,14412,18106,22797,30368,35719,42327,44106,47149,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	95266384	95301168	chr12:95266384-95301168	1	+	95266384	95299116	789624	10	12,18,209,138,148,332,194,101,208,2075,	0,17,39,3666,8357,15928,21279,27887,29666,32709,
#Partially deleted in new
chr12	95269823	95282531	chr12:95269823-95282531	0	+	95269823	95269823	8553170	3	365,148,219,	0,4918,12489,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	95275769	95275872	chr12:95275769-95275872	3	+	95275769	95275769	8553170	1	103,	0,
#Deleted in new
chr12	95286317	95286838	chr12:95286317-95286838	7	-	95286317	95286317	16724991	1	521,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	95290691	95290799	chr12:95290691-95290799	3	+	95290691	95290691	8553170	1	108,	0,
#Partially deleted in new
chr12	95294271	95300562	chr12:95294271-95300562	0	+	95294271	95294271	8553170	4	101,208,82,398,	0,1779,4590,5893,
#Partially deleted in new
chr12	95296068	95299482	chr12:95296068-95299482	0	+	95296068	95296068	8553170	2	190,389,	0,3025,
#Deleted in new
chr12	95308419	95308513	chr12:95308419-95308513	3	+	95308419	95308419	5263520	1	94,	0,
#Deleted in new
chr12	95309922	95309984	chr12:95309922-95309984	3	+	95309922	95309922	5263520	1	62,	0,
#Partially deleted in new
chr12	95311311	95416098	chr12:95311311-95416098	5	-	95311311	95311311	16724991	8	143,117,210,135,121,150,225,100,	0,29061,34688,65923,71140,94043,96601,104687,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	95337180	95442482	chr12:95337180-95442482	7	-	95337180	95337180	16724991	14	478,117,347,117,135,105,121,186,150,225,100,80,73,50,	0,3192,4187,5595,40054,43673,45271,59634,68174,70732,78818,99382,99573,105252,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	95345852	95442482	chr12:95345852-95442482	5	-	95345852	95345852	16724991	9	357,101,121,150,225,100,80,73,50,	0,35005,36599,59502,62060,70146,90710,90901,96580,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	95388598	95405504	chr12:95388598-95405504	4	-	95388598	95388598	16724991	2	190,150,	0,16756,
#Partially deleted in new
chr12	95415830	95436809	chr12:95415830-95436809	4	-	95415830	95415830	16724991	3	268,84,56,	0,20728,20923,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	95438736	95438843	chr12:95438736-95438843	3	-	95438736	95438736	8553170	1	107,	0,
#Partially deleted in new
chr12	95467396	95467861	chr12:95467396-95467861	7	-	95467396	95467396	16724991	1	465,	0,
#Partially deleted in new
chr12	95473519	95514342	chr12:95473519-95514342	0	+	95474179	95512823	789624	10	811,108,66,103,162,182,95,97,116,691,	0,2551,9695,12359,20536,21437,22484,30545,39281,40132,
#Partially deleted in new
chr12	95473950	95515839	chr12:95473950-95515839	3	+	95474179	95513904	0	11	380,108,66,103,162,182,95,97,104,116,2188,	0,2120,9264,11928,20105,21006,22053,30114,37944,38850,39701,
#Partially deleted in new
chr12	95474080	95514299	chr12:95474080-95514299	1	+	95474179	95513904	0	11	250,108,66,34,162,182,95,97,104,116,648,	0,1990,9134,11867,19975,20876,21923,29984,37814,38720,39571,
#Partially deleted in new
chr12	95474149	95514342	chr12:95474149-95514342	1	+	95474179	95513904	0	10	181,105,103,162,182,95,97,104,116,691,	0,1924,11729,19906,20807,21854,29915,37745,38651,39502,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	95474151	95485954	chr12:95474151-95485954	0	+	95474179	95485954	789624	5	179,108,84,66,76,	0,1919,7975,9063,11727,
#Partially deleted in new
chr12	95474151	95494974	chr12:95474151-95494974	0	+	95474179	95494974	789624	6	179,36,66,103,162,18,	0,1991,9063,11727,19904,20805,
#Partially deleted in new
chr12	95474154	95514329	chr12:95474154-95514329	1	+	95474179	95513904	789624	10	176,66,103,162,182,95,97,104,116,678,	0,9060,11724,19901,20802,21849,29910,37740,38646,39497,
#Partially deleted in new
chr12	95474161	95514326	chr12:95474161-95514326	1	+	95474179	95513904	789624	11	169,105,66,103,162,182,95,97,104,116,675,	0,1912,9053,11717,19894,20795,21842,29903,37733,38639,39490,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	95476070	95483494	chr12:95476070-95483494	0	+	95476070	95476070	8553170	2	108,280,	0,7144,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	95484793	95495149	chr12:95484793-95495149	0	+	95484842	95495149	789624	4	80,103,162,193,	0,1085,9262,10163,
#Partially deleted in new
chr12	95485808	95494114	chr12:95485808-95494114	0	+	95485808	95485808	8553170	2	173,59,	0,8247,
#Partially deleted in new
chr12	95516559	95551490	chr12:95516559-95551490	3	-	95518153	95534256	789624	6	1794,206,109,196,1498,219,	0,4437,8120,12247,16269,34712,
#Partially deleted in new
chr12	95517275	95548844	chr12:95517275-95548844	1	-	95518153	95534256	789624	6	1078,206,109,196,1498,74,	0,3721,7404,11531,15553,31495,
#Partially deleted in new
chr12	95518142	95534326	chr12:95518142-95534326	1	-	95524725	95534256	789624	3	211,109,1498,	0,6537,14686,
#Partially deleted in new
chr12	95518153	95548272	chr12:95518153-95548272	1	-	95518153	95534256	789624	6	200,206,109,196,1498,290,	0,2843,6526,10653,14675,29829,
#Partially deleted in new
chr12	95524519	95529000	chr12:95524519-95529000	0	-	95524519	95524519	8553170	2	269,194,	0,4287,
#Partially deleted in new
chr12	95533763	95548819	chr12:95533763-95548819	0	-	95533763	95534256	789624	3	563,54,49,	0,1609,15007,
#Partially deleted in new
chr12	95533922	95548798	chr12:95533922-95548798	0	-	95533922	95534256	789624	2	404,273,	0,14603,
#Deleted in new
chr12	95546449	95548669	chr12:95546449-95548669	0	-	95546449	95546449	8553170	2	541,144,	0,2076,
#Partially deleted in new
chr12	95551581	95665776	chr12:95551581-95665776	7	+	95551581	95551581	16724991	2	219,94,	0,114101,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	95617688	95617786	chr12:95617688-95617786	3	+	95617688	95617688	8553170	1	98,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	95649254	95673999	chr12:95649254-95673999	5	+	95649254	95649254	16724991	5	152,94,58,122,1722,	0,16428,21236,21765,23023,
#Partially deleted in new
chr12	95657806	95790758	chr12:95657806-95790758	3	-	95659085	95790309	789624	10	1416,171,69,116,214,189,127,279,530,504,	0,8003,12271,24900,25691,52634,55405,80059,129132,132448,
#Partially deleted in new
chr12	95657806	95790764	chr12:95657806-95790764	1	-	95659085	95787412	789624	11	1416,171,69,116,214,189,127,279,530,4,37,	0,8003,12271,24900,25691,52634,55405,80059,129132,132444,132921,
#Partially deleted in new
chr12	95658987	95791152	chr12:95658987-95791152	1	-	95659085	95787412	789624	10	235,171,69,116,214,189,127,279,530,41,	0,6822,11090,23719,24510,51453,54224,78878,127951,132124,
#Partially deleted in new
chr12	95659085	95790309	chr12:95659085-95790309	1	-	95659085	95790309	789624	9	137,171,116,214,189,127,279,530,55,	0,6724,23621,24412,51355,54126,78780,127853,131169,
#Partially deleted in new
chr12	95663396	95665859	chr12:95663396-95665859	0	-	95663396	95663396	8553170	2	237,50,	0,2413,
#Deleted in new
chr12	95672304	95673068	chr12:95672304-95673068	5	+	95672304	95672304	16724991	1	764,	0,
#Partially deleted in new
chr12	95713296	95739995	chr12:95713296-95739995	0	-	95713296	95713296	8553170	3	42,279,100,	0,24569,26599,
#Partially deleted in new
chr12	95738088	95789948	chr12:95738088-95789948	0	-	95738088	95787412	789624	3	56,530,163,	0,48850,51697,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	95792528	95792635	chr12:95792528-95792635	3	-	95792528	95792528	8553170	1	107,	0,
#Partially deleted in new
chr12	95795344	95858839	chr12:95795344-95858839	3	-	95795344	95795344	789624	3	313,68,86,	0,37672,63409,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	95803096	95823307	chr12:95803096-95823307	3	+	95803096	95803096	789624	2	174,219,	0,19992,
#Deleted in new
chr12	95858236	95858798	chr12:95858236-95858798	0	-	95858236	95858236	789624	2	351,45,	0,517,
#Deleted in new
chr12	95858236	95858693	chr12:95858236-95858693	0	-	95858236	95858236	8553170	1	457,	0,
#Partially deleted in new
chr12	95858927	95867053	chr12:95858927-95867053	3	+	95859073	95866071	0	4	149,126,65,1049,	0,2240,6396,7077,
#Partially deleted in new
chr12	95858963	95861841	chr12:95858963-95861841	0	+	95858963	95858963	8553170	2	113,674,	0,2204,
#Partially deleted in new
chr12	95858964	95880001	chr12:95858964-95880001	1	+	95859073	95879762	789624	3	112,126,314,	0,2203,20723,
#Deleted in new
chr12	95865078	95866451	chr12:95865078-95866451	0	+	95865078	95865078	8553170	2	310,447,	0,926,
#Deleted in new
chr12	95867047	95869802	chr12:95867047-95869802	0	-	95867047	95867047	8553170	2	142,323,	0,2432,
#Partially deleted in new
chr12	95867047	95879671	chr12:95867047-95879671	0	-	95869564	95879671	789624	5	142,94,99,136,28,	0,2432,5314,11163,12596,
#Partially deleted in new
chr12	95867048	95942974	chr12:95867048-95942974	3	-	95867075	95936509	789624	16	141,94,206,136,152,70,49,99,158,81,164,65,166,101,51,544,	0,2431,5206,11162,12595,14436,21409,23783,27940,31336,31519,39338,50080,51827,69424,75382,
#Partially deleted in new
chr12	95885168	95885797	chr12:95885168-95885797	7	+	95885168	95885168	16724991	1	629,	0,
#Partially deleted in new
chr12	95896517	95898743	chr12:95896517-95898743	0	-	95896517	95896517	8553170	2	111,359,	0,1867,
#Partially deleted in new
chr12	95917126	95942599	chr12:95917126-95942599	0	-	95917126	95918893	789624	5	168,101,70,51,169,	0,1749,2427,19346,25304,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	95918879	95942608	chr12:95918879-95942608	0	-	95919516	95936509	789624	4	97,185,51,178,	0,559,17593,23551,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	95918941	95942601	chr12:95918941-95942601	0	-	95918941	95918941	8553170	4	35,219,51,171,	0,497,17531,23489,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	95933184	95942635	chr12:95933184-95942635	1	-	95935522	95936509	789624	3	2343,51,205,	0,3288,9246,
#Partially deleted in new
chr12	95943292	95968716	chr12:95943292-95968716	3	+	95943398	95967843	789624	9	243,107,65,278,226,125,94,161,961,	0,9424,11618,13392,17105,19062,22393,23055,24463,
#Partially deleted in new
chr12	95943519	95968589	chr12:95943519-95968589	0	+	95943519	95956896	789624	8	16,107,278,226,125,94,161,834,	0,9197,13165,16878,18835,22166,22828,24236,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	95947055	95956696	chr12:95947055-95956696	0	+	95954969	95956696	8553170	4	382,107,65,12,	0,5661,7855,9629,
#Partially deleted in new
chr12	95956640	95960613	chr12:95956640-95960613	0	+	95956640	95956640	8553170	2	322,216,	0,3757,
#Partially deleted in new
chr12	95972661	95996365	chr12:95972661-95996365	3	-	95974231	95995910	789624	21	1711,70,109,135,166,66,81,59,96,148,48,140,126,38,67,73,75,28,61,328,288,	0,3767,3936,5282,7894,8136,11249,13246,13403,14405,15531,17731,20018,20789,21110,21264,21428,22136,22271,23002,23416,
#Partially deleted in new
chr12	95972661	95996365	chr12:95972661-95996365	1	-	95974231	95992770	789624	20	1711,70,109,135,166,66,81,59,96,148,48,140,126,38,73,75,28,61,328,288,	0,3767,3936,5282,7894,8136,11249,13246,13403,14405,15531,17731,20018,20789,21264,21428,22136,22271,23002,23416,
#Partially deleted in new
chr12	95973629	95996291	chr12:95973629-95996291	0	-	95993468	95995910	789624	20	743,70,109,135,166,66,81,59,96,148,48,140,126,38,73,75,28,61,328,214,	0,2799,2968,4314,6926,7168,10281,12278,12435,13437,14563,16763,19050,19821,20296,20460,21168,21303,22034,22448,
#Partially deleted in new
chr12	95973846	95996344	chr12:95973846-95996344	1	-	95974359	95995910	789624	20	526,109,135,166,66,81,59,96,148,48,140,126,38,67,73,75,28,61,328,267,	0,2751,4097,6709,6951,10064,12061,12218,13220,14346,16546,18833,19604,19925,20079,20243,20951,21086,21817,22231,
#Partially deleted in new
chr12	95974079	95996225	chr12:95974079-95996225	0	-	95993468	95995910	789624	20	293,70,109,135,166,49,81,59,96,148,48,140,126,38,73,75,28,61,328,148,	0,2349,2518,3864,6476,6735,9831,11828,11985,12987,14113,16313,18600,19371,19846,20010,20718,20853,21584,21998,
#Partially deleted in new
chr12	95976102	95980668	chr12:95976102-95980668	0	-	95976392	95980668	789624	4	396,109,135,113,	0,495,1841,4453,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	95983681	95985967	chr12:95983681-95985967	0	-	95983681	95983681	8553170	2	310,60,	0,2226,
#Partially deleted in new
chr12	95987073	95995928	chr12:95987073-95995928	0	-	95987073	95995910	789624	11	141,48,140,126,38,31,73,75,28,61,265,	0,1119,3319,5606,6377,6570,6852,7016,7724,7859,8590,
#Deleted in new
chr12	95989562	95990507	chr12:95989562-95990507	0	-	95989562	95989562	8553170	2	335,115,	0,830,
#Partially deleted in new
chr12	95990288	95992787	chr12:95990288-95992787	0	-	95990288	95990288	8553170	2	244,108,	0,2391,
#Partially deleted in new
chr12	95990504	95995200	chr12:95990504-95995200	0	-	95990504	95994976	789624	8	28,126,38,67,73,75,22,268,	0,2175,2946,3267,3421,3585,4293,4428,
#Partially deleted in new
chr12	95996520	96011489	chr12:95996520-96011489	3	+	95996520	95996520	8553170	4	110,170,110,472,	0,3570,13440,14497,
#Partially deleted in new
chr12	96000827	96035661	chr12:96000827-96035661	3	-	96000988	96035519	0	19	279,105,83,96,55,71,104,145,112,71,24,141,73,53,105,69,121,131,301,	0,2132,3010,5486,8266,12360,12922,14027,14755,16216,16729,17935,18340,20257,21319,23651,26616,28227,34533,
#Partially deleted in new
chr12	96000829	96011258	chr12:96000829-96011258	0	-	96000829	96000829	8553170	6	277,105,83,96,55,1265,	0,2130,3008,5484,8264,9164,
#Partially deleted in new
chr12	96000829	96043477	chr12:96000829-96043477	1	-	96000988	96043375	0	19	277,105,83,96,55,71,104,145,112,71,24,141,73,53,105,69,121,131,189,	0,2130,3008,5484,8264,12358,12920,14025,14753,16214,16727,17933,18338,20255,21317,23649,26614,28225,42459,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr12	96000832	96035528	chr12:96000832-96035528	0	-	96000832	96000832	8553170	19	274,105,83,96,4165,104,145,112,71,24,141,73,69,53,105,69,121,131,168,	0,2127,3005,5481,8261,12917,14022,14750,16211,16724,17930,18335,19857,20252,21314,23646,26611,28222,34528,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr12	96000906	96043520	chr12:96000906-96043520	1	-	96002995	96043375	0	18	200,105,96,55,71,104,145,112,71,24,141,73,53,105,69,121,131,232,	0,2053,5407,8187,12281,12843,13948,14676,16137,16650,17856,18261,20178,21240,23572,26537,28148,42382,
#Partially deleted in new
chr12	96002989	96035641	chr12:96002989-96035641	0	-	96024498	96035519	789624	18	75,144,96,55,71,104,145,112,71,24,141,73,53,105,69,60,131,281,	0,848,3324,6104,10198,10760,11865,12593,14054,14567,15773,16178,18095,19157,21489,24454,26065,32371,
#Partially deleted in new
chr12	96003593	96013252	chr12:96003593-96013252	0	-	96003593	96003593	8553170	4	327,96,55,65,	0,2720,5500,9594,
#Partially deleted in new
chr12	96006313	96015134	chr12:96006313-96015134	0	-	96006313	96006313	8553170	7	96,55,113,71,104,145,55,	0,2780,5439,6874,7436,8541,8766,
#Partially deleted in new
chr12	96011294	96015174	chr12:96011294-96015174	0	-	96011294	96011294	8553170	5	571,71,104,145,95,	0,1893,2455,3560,3785,
#Deleted in new
chr12	96013238	96014324	chr12:96013238-96014324	0	-	96013238	96013238	8553170	2	20,575,	0,511,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	96025322	96027971	chr12:96025322-96027971	3	+	96025322	96025322	8553170	2	82,574,	0,2075,
#Deleted in new
chr12	96060023	96060375	chr12:96060023-96060375	7	-	96060023	96060023	16724991	1	352,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	96101950	96102249	chr12:96101950-96102249	3	-	96101950	96101950	8553170	1	299,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	96160691	96172126	chr12:96160691-96172126	3	-	96160691	96160691	8553170	3	2557,125,300,	0,4615,11135,
#Partially deleted in new
chr12	96194381	96269835	chr12:96194381-96269835	3	+	96223566	96267180	789624	5	324,209,795,123,2754,	0,29183,52558,65349,72700,
#Partially deleted in new
chr12	96194401	96223682	chr12:96194401-96223682	0	+	96223566	96223682	789624	3	304,117,118,	0,3624,29163,
#Partially deleted in new
chr12	96194544	96267830	chr12:96194544-96267830	1	+	96223566	96267180	789624	4	161,209,123,749,	0,29020,65186,72537,
#Partially deleted in new
chr12	96247130	96267357	chr12:96247130-96267357	0	+	96247130	96259752	789624	4	153,132,123,276,	0,472,12600,19951,
#Partially deleted in new
chr12	96255459	96267490	chr12:96255459-96267490	0	+	96255459	96255459	8553170	3	91,123,409,	0,4271,11622,
#Partially deleted in new
chr12	96278260	96400560	chr12:96278260-96400560	3	-	96280241	96334836	789624	17	2019,78,91,43,106,98,121,124,63,95,115,57,126,134,165,147,575,	0,2547,4248,5342,7782,8403,10906,16738,19009,19366,20608,22043,32791,35060,45687,56458,121725,
#Partially deleted in new
chr12	96280423	96400480	chr12:96280423-96400480	1	-	96280769	96334836	789624	16	462,91,43,106,98,121,124,63,95,115,57,126,134,165,147,495,	0,2085,3179,5619,6240,8743,14575,16846,17203,18445,19880,30628,32897,43524,54295,119562,
#Partially deleted in new
chr12	96280543	96400074	chr12:96280543-96400074	1	-	96280769	96324071	789624	15	342,91,43,106,98,121,124,63,95,115,57,126,134,165,89,	0,1965,3059,5499,6120,8623,14455,16726,17083,18325,19760,30508,32777,43404,119442,
#Partially deleted in new
chr12	96281738	96283633	chr12:96281738-96283633	0	-	96281738	96281738	8553170	2	861,31,	0,1864,
#Partially deleted in new
chr12	96285729	96286750	chr12:96285729-96286750	0	-	96285729	96285729	8553170	2	419,87,	0,934,
#Partially deleted in new
chr12	96286712	96295403	chr12:96286712-96295403	0	-	96286712	96286712	8553170	3	49,121,405,	0,2454,8286,
#Partially deleted in new
chr12	96289257	96303125	chr12:96289257-96303125	0	-	96289257	96289257	8553170	7	30,124,63,95,115,57,85,	0,5741,8012,8369,9611,11046,13783,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	96303374	96303513	chr12:96303374-96303513	3	-	96303374	96303374	8553170	1	139,	0,
#Partially deleted in new
chr12	96311057	96399404	chr12:96311057-96399404	0	-	96311057	96334836	789624	5	120,134,165,147,60,	0,2263,12890,23661,88287,
#Partially deleted in new
chr12	96311111	96399404	chr12:96311111-96399404	0	-	96311111	96334836	789624	5	66,134,165,147,71,	0,2209,12836,23607,88222,
#Partially deleted in new
chr12	96313409	96335230	chr12:96313409-96335230	0	-	96313409	96335062	789624	4	45,165,147,199,	0,10538,21309,21622,
#Partially deleted in new
chr12	96323965	96399364	chr12:96323965-96399364	0	-	96323965	96334836	789624	3	147,147,272,	0,10753,75127,
#Deleted in new
chr12	96386817	96387194	chr12:96386817-96387194	7	-	96386817	96386817	16724991	1	377,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	96422325	96485442	chr12:96422325-96485442	3	-	96422325	96422325	8553170	4	66,87,187,39,	0,7055,61124,63078,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	96427199	96427486	chr12:96427199-96427486	3	-	96427199	96427199	8553170	1	287,	0,
#Partially deleted in new
chr12	96489570	96501201	chr12:96489570-96501201	0	+	96489570	96489570	8553170	2	356,368,	0,11263,
#Partially deleted in new
chr12	96489574	96538668	chr12:96489574-96538668	0	+	96489609	96538668	789624	12	352,106,172,59,144,114,102,199,182,166,86,285,	0,11259,17353,23411,29353,32282,32513,37671,44217,44487,45940,48809,
#Partially deleted in new
chr12	96489586	96875555	chr12:96489586-96875555	3	+	96489609	96860938	789624	68	340,106,144,172,59,144,114,102,199,182,166,86,135,151,77,129,127,87,122,177,93,186,137,148,156,123,132,115,90,127,112,101,231,143,182,228,224,136,103,153,88,210,67,183,87,123,54,196,80,161,106,148,158,180,127,156,106,94,99,142,174,224,171,107,139,75,134,438,	0,11247,14299,17341,23399,29341,32270,32501,37659,44205,44475,45928,48797,51250,58315,64595,65089,74881,75057,86998,91010,91333,99840,102903,104704,109058,132003,134180,136131,137226,140506,140964,154591,158288,160304,162001,168295,168624,174243,190013,195061,195442,199329,201541,204135,210384,215156,219021,228856,230818,250369,252852,253815,254144,254433,264156,266871,267908,274564,275490,295130,297088,302742,322149,328188,339427,371232,385531,
#Partially deleted in new
chr12	96547926	96554968	chr12:96547926-96554968	0	+	96547926	96547926	8553170	3	52,129,293,	0,6255,6749,
#Partially deleted in new
chr12	96554186	96576698	chr12:96554186-96576698	0	+	96554186	96554186	8553170	6	124,127,87,122,228,114,	0,489,10281,10457,10696,22398,
#Partially deleted in new
chr12	96592560	96875533	chr12:96592560-96875533	0	+	96592560	96860938	789624	46	77,156,123,132,115,90,127,112,101,231,143,182,228,224,136,103,153,195,88,210,67,183,87,123,54,196,80,161,106,148,158,180,127,156,106,94,99,142,174,224,171,107,139,75,134,416,	0,1730,6084,29029,31206,33157,34252,37532,37990,51617,55314,57330,59027,65321,65650,71269,87039,89581,92087,92468,96355,98567,101161,107410,112182,116047,125882,127844,147395,149878,150841,151170,151459,161182,163897,164934,171590,172516,192156,194114,199768,219175,225214,236453,268258,282557,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	96621711	96647127	chr12:96621711-96647127	0	+	96621711	96645167	789624	8	10,115,90,127,112,101,231,1970,	0,2055,4006,5101,8381,8839,22466,23446,
#Partially deleted in new
chr12	96647974	96765270	chr12:96647974-96765270	0	+	96647974	96647974	8553170	27	43,182,228,224,136,103,153,88,210,67,183,87,123,54,196,80,161,106,148,158,180,127,156,106,94,99,194,	0,1916,3613,9907,10236,15855,31625,36673,37054,40941,43153,45747,51996,56768,60633,70468,72430,91981,94464,95427,95756,96045,105768,108483,109520,116176,117102,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	96900696	96902698	chr12:96900696-96902698	7	-	96900696	96900696	16724991	3	68,443,851,	0,412,1151,
#Partially deleted in new
chr12	96907222	96953777	chr12:96907222-96953777	3	+	96909759	96952053	789624	16	78,253,144,95,117,141,230,202,196,129,48,203,157,157,67,1829,	0,381,2529,5500,10398,12762,27753,29388,29975,33186,35354,36337,37416,38470,44209,44726,
#Partially deleted in new
chr12	96907223	96953351	chr12:96907223-96953351	1	+	96909759	96952053	789624	15	77,144,95,117,141,230,202,196,129,48,203,157,157,67,1403,	0,2528,5499,10397,12761,27752,29387,29974,33185,35353,36336,37415,38469,44208,44725,
#Partially deleted in new
chr12	96907229	96920118	chr12:96907229-96920118	0	+	96907611	96920118	789624	6	71,21,144,95,117,134,	0,374,2522,5493,10391,12755,
#Partially deleted in new
chr12	96907229	96934980	chr12:96907229-96934980	0	+	96909759	96934980	789624	6	93,144,95,117,141,5,	0,2522,5493,10391,12755,27746,
#Partially deleted in new
chr12	96907232	96936718	chr12:96907232-96936718	0	+	96917656	96924856	789624	6	68,21,117,141,110,108,	0,371,10388,12752,17600,29378,
#Partially deleted in new
chr12	96907232	96917691	chr12:96907232-96917691	0	+	96909759	96917691	789624	6	68,21,155,144,95,71,	0,371,469,2519,5490,10388,
#Partially deleted in new
chr12	96907237	96952475	chr12:96907237-96952475	1	+	96917656	96952053	789624	14	63,253,117,141,230,202,196,129,48,203,157,157,67,527,	0,366,10383,12747,27738,29373,29960,33171,35339,36322,37401,38455,44194,44711,
#Partially deleted in new
chr12	96907237	96936654	chr12:96907237-96936654	0	+	96907237	96907237	8553170	5	63,253,141,230,44,	0,366,12747,27738,29373,
#Partially deleted in new
chr12	96907256	96936638	chr12:96907256-96936638	0	+	96917656	96936638	789624	6	44,21,117,141,230,28,	0,347,10364,12728,27719,29354,
#Partially deleted in new
chr12	96907256	96924895	chr12:96907256-96924895	0	+	96907256	96907256	8553170	6	44,144,95,117,141,63,	0,2495,5466,10364,12728,17576,
#Partially deleted in new
chr12	96907256	96936759	chr12:96907256-96936759	0	+	96907256	96907256	8553170	4	44,141,230,149,	0,12728,27719,29354,
#Partially deleted in new
chr12	96907465	96952270	chr12:96907465-96952270	1	+	96907611	96952053	789624	15	159,144,95,117,141,230,202,196,129,48,203,157,157,67,322,	0,2286,5257,10155,12519,27510,29145,29732,32943,35111,36094,37173,38227,43966,44483,
#Partially deleted in new
chr12	96912575	96953221	chr12:96912575-96953221	1	+	96917656	96952053	789624	13	242,117,141,230,202,196,129,48,203,157,157,67,1273,	0,5045,7409,22400,24035,24622,27833,30001,30984,32063,33117,38856,39373,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	96979527	96979629	chr12:96979527-96979629	3	-	96979527	96979527	8553170	1	102,	0,
#Partially deleted in new
chr12	96985655	97185609	chr12:96985655-97185609	3	+	96985655	96985655	8553170	2	39,534,	0,199420,
#Partially deleted in new
chr12	97024020	97051129	chr12:97024020-97051129	3	+	97024020	97024020	8553170	3	100,90,81,	0,9313,27028,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	97150080	97154627	chr12:97150080-97154627	3	-	97150080	97150080	8553170	1	4547,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	97272691	97276209	chr12:97272691-97276209	3	-	97272691	97272691	8553170	3	106,251,219,	0,1771,3299,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	97430883	97565035	chr12:97430883-97565035	3	+	97430883	97430883	8553170	14	89,148,209,138,60,146,109,128,187,126,205,162,251,886,	0,903,31780,32268,34784,61577,62293,62991,63811,65047,99771,129653,129913,133266,
#Partially deleted in new
chr12	97431652	97565015	chr12:97431652-97565015	0	+	97431652	97431652	8553170	14	282,149,175,209,138,146,109,128,187,205,162,251,179,278,	0,29062,30319,31011,31499,60808,61524,62222,63042,99002,128884,129144,132497,133085,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	97460722	97565035	chr12:97460722-97565035	1	+	97460722	97460722	8553170	16	141,175,209,138,60,69,146,109,128,187,205,152,251,162,251,886,	0,1249,1941,2429,4945,30921,31738,32454,33152,33972,69932,80483,91109,99814,100074,103427,
#Partially deleted in new
chr12	97464817	97598415	chr12:97464817-97598415	0	+	97464817	97464817	8553170	14	254,60,58,146,109,128,187,126,205,162,251,115,88,210,	0,850,18613,27643,28359,29057,29877,31113,65837,95719,95979,126158,129149,133388,
#Partially deleted in new
chr12	97465020	97533766	chr12:97465020-97533766	1	+	97465020	97465020	789624	9	51,60,146,105,128,187,126,205,1091,	0,647,27440,28160,28854,29674,30910,65634,67655,
#Deleted in new
chr12	97465667	97465727	chr12:97465667-97465727	0	+	97465667	97465667	8553170	1	60,	0,
#Deleted in new
chr12	97491908	97491978	chr12:97491908-97491978	3	+	97491908	97491908	5263520	1	70,	0,
#Partially deleted in new
chr12	97492460	97560698	chr12:97492460-97560698	0	+	97492460	97492460	8553170	7	146,109,112,187,126,205,162,	0,716,1430,2234,3470,38194,68076,
#Deleted in new
chr12	97492461	97492597	chr12:97492461-97492597	3	+	97492461	97492461	8553170	1	136,	0,
#Deleted in new
chr12	97492636	97493980	chr12:97492636-97493980	0	+	97492636	97492636	8553170	2	649,106,	0,1238,
#Deleted in new
chr12	97493177	97493286	chr12:97493177-97493286	3	+	97493177	97493177	8553170	1	109,	0,
#Deleted in new
chr12	97493896	97494003	chr12:97493896-97494003	3	+	97493896	97493896	8553170	1	107,	0,
#Deleted in new
chr12	97495931	97496057	chr12:97495931-97496057	3	+	97495931	97495931	8553170	1	126,	0,
#Partially deleted in new
chr12	97530363	97560696	chr12:97530363-97560696	0	+	97530363	97530363	8553170	2	496,160,	0,30173,
#Deleted in new
chr12	97530655	97530858	chr12:97530655-97530858	3	+	97530655	97530655	8553170	1	203,	0,
#Deleted in new
chr12	97532690	97532958	chr12:97532690-97532958	3	+	97532690	97532690	8553170	1	268,	0,
#Deleted in new
chr12	97552136	97552228	chr12:97552136-97552228	3	-	97552136	97552136	8553170	1	92,	0,
#Deleted in new
chr12	97560556	97560721	chr12:97560556-97560721	3	+	97560556	97560556	8553170	1	165,	0,
#Deleted in new
chr12	97560855	97561048	chr12:97560855-97561048	3	+	97560855	97560855	8553170	1	193,	0,
#Deleted in new
chr12	97563256	97563971	chr12:97563256-97563971	3	-	97563256	97563256	8553170	1	715,	0,
#Deleted in new
chr12	97563811	97563911	chr12:97563811-97563911	3	+	97563811	97563811	5263520	1	100,	0,
#Deleted in new
chr12	97564173	97564327	chr12:97564173-97564327	3	+	97564173	97564173	8553170	1	154,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	97564348	97565035	chr12:97564348-97565035	0	+	97564348	97564348	8553170	1	687,	0,
#Deleted in new
chr12	97679878	97680047	chr12:97679878-97680047	7	-	97679878	97679878	16724991	1	169,	0,
#Partially deleted in new
chr12	97713411	97753598	chr12:97713411-97753598	7	-	97713411	97713411	16724991	7	420,107,236,226,105,225,322,	0,5772,19753,26930,33553,33848,39865,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	97730047	97756517	chr12:97730047-97756517	4	-	97730047	97730047	16724991	3	2629,236,80,	0,3117,26390,
#Deleted in new
chr12	97732580	97733267	chr12:97732580-97733267	5	-	97732580	97732580	16724991	1	687,	0,
#Partially deleted in new
chr12	97753098	97756490	chr12:97753098-97756490	4	-	97753098	97753098	16724991	2	502,53,	0,3339,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	97753255	97761859	chr12:97753255-97761859	5	-	97753255	97753255	16724991	3	345,44,190,	0,6171,8414,
#Deleted in new
chr12	97939055	97939121	chr12:97939055-97939121	3	-	97939055	97939055	5263520	1	66,	0,
#Deleted in new
chr12	97995382	97995448	chr12:97995382-97995448	3	-	97995382	97995382	5263520	1	66,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	98113013	98292445	chr12:98113013-98292445	3	-	98113013	98113013	8553170	5	143,218,92,32,36,	0,706,1938,87091,179396,
#Deleted in new
chr12	98317740	98318349	chr12:98317740-98318349	7	+	98317740	98317740	16724991	1	609,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	98417895	98418038	chr12:98417895-98418038	3	-	98417895	98417895	8553170	1	143,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	98453834	98457145	chr12:98453834-98457145	7	-	98453834	98453834	16724991	1	3311,	0,
#Deleted in new
chr12	98454876	98457115	chr12:98454876-98457115	5	-	98454876	98454876	16724991	1	2239,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	98485543	98503855	chr12:98485543-98503855	3	-	98485543	98485543	789624	4	1645,54,30,96,	0,7887,17039,18216,
#Partially deleted in new
chr12	98486972	98491086	chr12:98486972-98491086	0	-	98486972	98486972	8553170	2	216,93,	0,4021,
#Deleted in new
chr12	98512972	98516422	chr12:98512972-98516422	3	-	98512972	98512972	789624	2	2925,432,	0,3018,
#Deleted in new
chr12	98515293	98516210	chr12:98515293-98516210	1	-	98515293	98515293	8553170	3	97,421,220,	0,183,697,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	98515511	98550379	chr12:98515511-98550379	1	+	98515867	98547858	789624	9	635,127,159,98,120,96,111,89,2807,	0,12374,16168,21963,28718,28930,29439,30847,32061,
#Partially deleted in new
chr12	98515578	98528013	chr12:98515578-98528013	0	+	98515578	98515578	8553170	3	236,176,128,	0,392,12307,
#Partially deleted in new
chr12	98515617	98548828	chr12:98515617-98548828	1	+	98515867	98547858	789624	8	529,127,159,98,96,111,89,1256,	0,12268,16062,21857,28824,29333,30741,31955,
#Partially deleted in new
chr12	98515629	98535634	chr12:98515629-98535634	3	+	98515867	98534342	0	4	517,127,159,2812,	0,12256,16050,17193,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	98515630	98548957	chr12:98515630-98548957	1	+	98515867	98547858	789624	6	516,127,159,98,89,1385,	0,12255,16049,21844,30728,31942,
#Partially deleted in new
chr12	98515631	98531779	chr12:98515631-98531779	0	+	98515631	98515631	8553170	4	154,183,127,100,	0,332,12254,16048,
#Partially deleted in new
chr12	98515851	98537713	chr12:98515851-98537713	1	+	98515867	98537656	789624	4	295,127,159,239,	0,12034,15828,21623,
#Partially deleted in new
chr12	98516251	98532966	chr12:98516251-98532966	0	+	98516251	98516251	8553170	4	266,127,159,144,	0,11634,15428,16571,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	98527528	98537574	chr12:98527528-98537574	0	+	98527528	98527528	8553170	3	484,159,100,	0,4151,9946,
#Partially deleted in new
chr12	98527884	98532272	chr12:98527884-98532272	0	+	98527884	98527884	8553170	2	128,593,	0,3795,
#Partially deleted in new
chr12	98527885	98547701	chr12:98527885-98547701	0	+	98527885	98547701	789624	6	127,159,98,111,89,129,	0,3794,9589,17065,18473,19687,
#Partially deleted in new
chr12	98544201	98547864	chr12:98544201-98547864	0	+	98544201	98544201	8553170	5	148,96,111,89,292,	0,240,749,2157,3371,
#Partially deleted in new
chr12	98544638	98547787	chr12:98544638-98547787	0	+	98544638	98544638	8553170	3	423,89,215,	0,1720,2934,
#Partially deleted in new
chr12	98590722	98591214	chr12:98590722-98591214	7	-	98590722	98590722	16724991	1	492,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	98593590	98606379	chr12:98593590-98606379	1	+	98593978	98601528	789624	8	150,157,122,180,182,173,111,5012,	0,388,2136,4265,4931,6364,7580,7777,
#Partially deleted in new
chr12	98593624	98601997	chr12:98593624-98601997	1	+	98593978	98601528	789624	7	511,122,180,182,173,111,630,	0,2102,4231,4897,6330,7546,7743,
#Partially deleted in new
chr12	98593624	98601997	chr12:98593624-98601997	3	+	98593978	98601528	789624	8	116,161,125,180,182,173,111,630,	0,350,1808,4231,4897,6330,7546,7743,
#Partially deleted in new
chr12	98593649	98601707	chr12:98593649-98601707	1	+	98593978	98601528	789624	8	91,157,125,180,182,173,111,340,	0,329,1783,4206,4872,6305,7521,7718,
#Partially deleted in new
chr12	98593654	98601997	chr12:98593654-98601997	0	+	98593654	98593654	8553170	7	86,1874,180,182,173,111,630,	0,320,4201,4867,6300,7516,7713,
#Partially deleted in new
chr12	98593655	98598034	chr12:98593655-98598034	0	+	98593978	98598034	789624	4	85,161,125,179,	0,319,1777,4200,
#Partially deleted in new
chr12	98593659	98601708	chr12:98593659-98601708	1	+	98593978	98601528	789624	8	81,161,122,180,182,173,111,341,	0,315,2067,4196,4862,6295,7511,7708,
#Partially deleted in new
chr12	98593685	98598073	chr12:98593685-98598073	1	+	98593978	98598047	789624	4	55,161,122,218,	0,289,2041,4170,
#Partially deleted in new
chr12	98593685	98598036	chr12:98593685-98598036	0	+	98593978	98598036	789624	3	450,125,181,	0,1747,4170,
#Partially deleted in new
chr12	98593685	98594503	chr12:98593685-98594503	1	+	98593978	98594347	789624	2	55,525,	0,293,
#Partially deleted in new
chr12	98593695	98601674	chr12:98593695-98601674	1	+	98593978	98601528	789624	8	49,161,122,180,182,173,111,307,	0,279,2031,4160,4826,6259,7475,7672,
#Partially deleted in new
chr12	98593695	98601707	chr12:98593695-98601707	0	+	98593978	98595590	789624	8	45,157,229,180,182,173,111,340,	0,283,1737,4160,4826,6259,7475,7672,
#Partially deleted in new
chr12	98593724	98601668	chr12:98593724-98601668	1	+	98593978	98601528	789624	6	411,122,180,182,173,301,	0,2002,4131,4797,6230,7643,
#Partially deleted in new
chr12	98595663	98598563	chr12:98595663-98598563	0	+	98595663	98595663	8553170	2	185,708,	0,2192,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	98597564	98598567	chr12:98597564-98598567	0	+	98597564	98597564	8553170	2	471,46,	0,957,
#Partially deleted in new
chr12	98599634	98599883	chr12:98599634-98599883	3	+	98599634	98599634	789624	1	249,	0,
#Partially deleted in new
chr12	98599857	98601708	chr12:98599857-98601708	0	+	98599857	98599857	8553170	3	270,111,341,	0,1313,1510,
#Partially deleted in new
chr12	98601064	98602168	chr12:98601064-98602168	0	+	98601064	98601064	8553170	2	217,801,	0,303,
#Partially deleted in new
chr12	98613404	98645113	chr12:98613404-98645113	1	-	98613584	98644701	789624	3	936,118,591,	0,20891,31118,
#Partially deleted in new
chr12	98613404	98644954	chr12:98613404-98644954	1	-	98614306	98644701	789624	2	936,432,	0,31118,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	98624248	98645075	chr12:98624248-98645075	3	-	98625929	98644701	789624	3	2518,118,553,	0,10047,20274,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr12	98645140	98733527	chr12:98645140-98733527	3	+	98648359	98732566	0	27	695,179,190,198,184,113,132,239,168,132,114,185,127,126,132,126,162,129,126,120,117,126,120,126,126,144,1108,	0,3178,3485,4346,14019,17315,17534,20412,21049,22372,25832,26394,32284,35136,38002,41607,54267,58230,61344,63444,67178,70286,78052,78498,80274,82032,87279,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	98645299	98735426	chr12:98645299-98735426	1	+	98648359	98732481	0	8	536,179,190,198,184,113,132,3007,	0,3019,3326,4187,13860,17156,17375,87120,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr12	98645299	98735426	chr12:98645299-98735426	1	+	98648359	98732566	0	26	536,179,190,198,184,113,132,239,168,132,114,185,127,126,132,126,162,126,120,117,126,120,126,126,144,3007,	0,3019,3326,4187,13860,17156,17375,20253,20890,22213,25673,26235,32125,34977,37843,41448,54108,61185,63285,67019,70127,77893,78339,80115,81873,87120,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr12	98645299	98735433	chr12:98645299-98735433	1	+	98648359	98732566	0	26	536,179,157,198,184,113,132,239,168,132,114,185,127,126,132,126,162,126,120,117,126,120,126,126,144,3014,	0,3019,3326,4187,13860,17156,17375,20253,20890,22213,25673,26235,32125,34977,37843,41448,54108,61185,63285,67019,70127,77893,78339,80115,81873,87120,
#Partially deleted in new
chr12	98645670	98648932	chr12:98645670-98648932	1	+	98648359	98648880	789624	3	165,179,307,	0,2648,2955,
#Partially deleted in new
chr12	98648315	98732563	chr12:98648315-98732563	1	+	98648359	98732481	0	7	182,190,198,184,113,132,144,	0,310,1171,10844,14140,14359,84104,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr12	98648352	98735426	chr12:98648352-98735426	1	+	98648359	98732566	0	26	145,157,198,184,113,132,239,168,132,114,185,127,126,132,126,162,129,126,120,117,126,120,126,126,144,3007,	0,273,1134,10807,14103,14322,17200,17837,19160,22620,23182,29072,31924,34790,38395,51055,55018,58132,60232,63966,67074,74840,75286,77062,78820,84067,
#Partially deleted in new
chr12	98648354	98732687	chr12:98648354-98732687	1	+	98648359	98732566	0	25	143,190,198,184,113,132,239,168,132,114,185,127,126,132,126,162,126,120,117,126,120,126,126,144,268,	0,271,1132,10805,14101,14320,17198,17835,19158,22618,23180,29070,31922,34788,38393,51053,58130,60230,63964,67072,74838,75284,77060,78818,84065,
#Partially deleted in new
chr12	98648359	98732566	chr12:98648359-98732566	1	+	98648359	98732566	789624	24	138,190,198,184,113,132,239,168,132,114,185,127,126,132,126,162,126,120,117,126,120,126,144,147,	0,266,1127,10800,14096,14315,17193,17830,19153,22613,23175,29065,31917,34783,38388,51048,58125,60225,63959,67067,74833,75279,78813,84060,
#Partially deleted in new
chr12	98670860	98671697	chr12:98670860-98671697	0	+	98670860	98670860	8553170	2	226,163,	0,674,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	98699495	98712761	chr12:98699495-98712761	0	+	98699495	98699495	8553170	5	74,129,126,120,443,	0,3875,6989,9089,12823,
#Partially deleted in new
chr12	98723268	98733059	chr12:98723268-98733059	0	+	98723268	98723268	8553170	6	44,126,126,19,38,640,	0,370,2146,3904,4010,9151,
#Partially deleted in new
chr12	98726456	98751436	chr12:98726456-98751436	0	-	98735559	98751436	789624	3	253,503,82,	0,8675,24898,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	98733647	98735418	chr12:98733647-98735418	0	+	98733647	98733647	8553170	2	1198,398,	0,1373,
#Partially deleted in new
chr12	98734683	98894899	chr12:98734683-98894899	1	-	98735559	98829257	0	10	951,168,138,87,12,72,129,180,108,270,	0,16671,38358,46433,47442,64250,66313,94490,97345,159946,
#Partially deleted in new
chr12	98734790	99154746	chr12:98734790-99154746	1	-	98735559	99154492	0	11	844,168,138,87,12,72,129,108,153,99,458,	0,16564,38251,46326,47335,64143,66206,97238,318366,350134,419498,
#Partially deleted in new
chr12	98735421	99984237	chr12:98735421-99984237	3	-	98735559	99984237	0	26	213,168,138,87,12,72,129,180,108,153,99,107,73,590,181,137,166,144,167,114,102,76,297,157,81,134,	0,15933,37620,45695,46704,63512,65575,93752,96607,317735,349503,418867,508920,510853,664209,708251,769054,919645,1037500,1040126,1044449,1046600,1070982,1076733,1089887,1248682,
#Partially deleted in new
chr12	98735517	98745839	chr12:98735517-98745839	0	-	98735517	98735517	8553170	2	117,316,	0,10006,
#Partially deleted in new
chr12	98735559	99984271	chr12:98735559-99984271	1	-	98735559	99655078	0	18	75,168,138,87,12,72,129,108,153,99,107,61,590,181,137,166,144,168,	0,15795,37482,45557,46566,63374,65437,96469,317597,349365,418729,508794,510715,664071,708113,768916,919507,1248544,
#Partially deleted in new
chr12	98743973	99154867	chr12:98743973-99154867	1	-	98745738	99154321	0	12	1873,168,138,87,12,72,129,75,153,99,107,60,	0,7381,29068,37143,38152,54960,57023,63870,309183,340951,410315,410834,
#Partially deleted in new
chr12	98743973	99154746	chr12:98743973-99154746	1	-	98745738	99154492	0	12	1876,168,138,87,12,72,129,72,108,153,99,458,	0,7381,29068,37143,38152,54960,57023,63870,88055,309183,340951,410315,
#Partially deleted in new
chr12	98744215	99154764	chr12:98744215-99154764	1	-	98745738	99154492	0	13	1634,168,138,87,12,72,129,72,180,108,153,99,476,	0,7139,28826,36901,37910,54718,56781,63628,84958,87813,308941,340709,410073,
#Partially deleted in new
chr12	98745350	99155090	chr12:98745350-99155090	1	-	98745738	99154973	0	12	496,168,138,87,12,72,129,108,153,99,107,121,	0,6004,27691,35766,36775,53583,55646,86678,307806,339574,408938,409619,
#Partially deleted in new
chr12	98745399	98894891	chr12:98745399-98894891	1	-	98745738	98829257	789624	11	447,168,138,87,12,72,129,72,180,108,262,	0,5955,27642,35717,36726,53534,55597,62444,83774,86629,149230,
#Partially deleted in new
chr12	98745399	99246435	chr12:98745399-99246435	0	-	98745738	99246435	789624	14	450,168,138,87,12,72,129,180,108,153,99,107,73,161,	0,5955,27642,35717,36726,53534,55597,83774,86629,307757,339525,408889,498942,500875,
#Partially deleted in new
chr12	98745459	98832141	chr12:98745459-98832141	0	-	98781184	98829257	789624	8	390,168,138,107,72,129,180,113,	0,5895,27582,35657,53474,55537,83714,86569,
#Partially deleted in new
chr12	98745738	99154492	chr12:98745738-99154492	1	-	98745738	99154492	0	11	111,168,138,87,12,72,129,108,153,99,204,	0,5616,27303,35378,36387,53195,55258,86290,307418,339186,408550,
#Partially deleted in new
chr12	98745832	99154492	chr12:98745832-99154492	1	-	98745832	99154492	0	12	33,168,138,87,12,72,129,180,108,153,99,204,	0,5522,27209,35284,36293,53101,55164,83341,86196,307324,339092,408456,
#Partially deleted in new
chr12	98772993	98781212	chr12:98772993-98781212	0	-	98772993	98772993	8553170	2	186,96,	0,8123,
#Partially deleted in new
chr12	98781116	98895296	chr12:98781116-98895296	0	-	98781116	98829257	789624	9	87,9,72,129,72,180,108,57,65,	0,373,17817,19880,26727,48057,50912,114016,114115,
#Deleted in new
chr12	98794484	98794964	chr12:98794484-98794964	7	+	98794484	98794484	16724991	1	480,	0,
#Partially deleted in new
chr12	98798929	98895208	chr12:98798929-98895208	0	-	98798929	98829257	789624	5	76,129,180,108,76,	0,2067,30244,33099,96203,
#Partially deleted in new
chr12	98798933	98894861	chr12:98798933-98894861	0	-	98798933	98829182	789624	6	72,129,75,78,108,232,	0,2063,8910,30240,33095,95696,
#Partially deleted in new
chr12	98798933	98895208	chr12:98798933-98895208	0	-	98798933	98798993	789624	5	72,129,75,108,76,	0,2063,8910,33095,96199,
#Partially deleted in new
chr12	98800996	98894864	chr12:98800996-98894864	0	-	98800996	98800996	8553170	3	129,108,235,	0,31032,93633,
#Partially deleted in new
chr12	98801089	98893716	chr12:98801089-98893716	0	-	98801089	98829257	789624	5	36,72,180,108,178,	0,6754,28084,30939,92449,
#Partially deleted in new
chr12	98801092	98895300	chr12:98801092-98895300	0	-	98801092	98829257	789624	4	33,180,108,168,	0,28081,30936,94040,
#Partially deleted in new
chr12	98829174	98895263	chr12:98829174-98895263	0	-	98829174	98829257	789624	3	179,108,131,	0,2854,65958,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	98831003	99154715	chr12:98831003-99154715	0	-	98831003	98831003	8553170	4	1133,153,99,427,	0,222153,253921,323285,
#Partially deleted in new
chr12	98931681	98976656	chr12:98931681-98976656	3	+	98931681	98931681	8553170	4	43,128,76,265,	0,18037,22662,44710,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	98956351	99079964	chr12:98956351-99079964	0	-	98956351	98956351	8553170	3	53,153,220,	0,96805,123393,
#Partially deleted in new
chr12	99048713	99053304	chr12:99048713-99053304	0	-	99048713	99048713	8553170	2	394,148,	0,4443,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	99083782	99083905	chr12:99083782-99083905	7	-	99083782	99083782	16724991	1	123,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	99093358	99105011	chr12:99093358-99105011	3	+	99093358	99093358	789624	5	262,103,117,67,489,	0,3657,4003,6435,11164,
#Partially deleted in new
chr12	99246364	99344971	chr12:99246364-99344971	0	-	99246364	99246364	8553170	2	500,79,	0,98528,
#Partially deleted in new
chr12	99246435	99343790	chr12:99246435-99343790	0	-	99246435	99246435	8553170	3	429,129,42,	0,94684,97313,
#Partially deleted in new
chr12	99246483	99386297	chr12:99246483-99386297	0	-	99246483	99246483	8553170	3	381,154,36,	0,105492,139778,
#Partially deleted in new
chr12	99246830	99984654	chr12:99246830-99984654	0	-	99246830	99984237	789624	12	34,181,137,166,144,167,114,76,297,157,81,551,	0,152800,196842,257645,408236,526091,528717,535191,559573,565324,578478,737273,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	99504597	99706624	chr12:99504597-99706624	0	-	99504597	99504597	8553170	3	44,144,195,	0,150469,201832,
#Deleted in new
chr12	99647752	99650046	chr12:99647752-99650046	3	+	99648174	99649398	789624	2	1037,759,	0,1535,
#Partially deleted in new
chr12	99772709	99775643	chr12:99772709-99775643	0	-	99772709	99772709	8553170	2	379,96,	0,2838,
#Partially deleted in new
chr12	99772921	99825391	chr12:99772921-99825391	1	-	99772921	99825391	789624	7	167,114,102,76,297,157,83,	0,2626,6949,9100,33482,39233,52387,
#Partially deleted in new
chr12	100009051	100009838	chr12:100009051-100009838	7	-	100009051	100009051	16724991	1	787,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	100026247	100027540	chr12:100026247-100027540	3	-	100026247	100026247	8553170	1	1293,	0,
#Partially deleted in new
chr12	100028454	100048196	chr12:100028454-100048196	0	-	100028553	100048196	789624	4	156,194,109,254,	0,11141,19075,19488,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	100032324	100034074	chr12:100032324-100034074	3	-	100032324	100032324	8553170	1	1750,	0,
#Partially deleted in new
chr12	100037075	100142848	chr12:100037075-100142848	3	-	100037635	100142635	789624	21	680,194,109,254,151,143,176,1505,194,142,119,183,84,181,171,141,190,92,39,163,257,	0,2520,10454,10867,13092,14003,20495,20953,22774,35596,45940,47400,49199,51839,58591,60289,61276,65690,66837,71310,105516,
#Partially deleted in new
chr12	100037142	100092948	chr12:100037142-100092948	1	-	100037635	100086329	789624	15	613,194,109,254,151,143,176,1505,194,142,119,183,84,181,40,	0,2453,10387,10800,13025,13936,20428,20886,22707,35529,45873,47333,49132,51772,55766,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	100050264	100051874	chr12:100050264-100051874	0	-	100050264	100050264	8553170	2	54,796,	0,814,
#Partially deleted in new
chr12	100069907	100142847	chr12:100069907-100142847	1	-	100070149	100142635	789624	13	262,142,119,183,84,181,171,141,190,92,39,163,256,	0,2764,13108,14568,16367,19007,25759,27457,28444,32858,34005,38478,72684,
#Partially deleted in new
chr12	100072678	100092931	chr12:100072678-100092931	0	-	100072678	100086329	789624	5	135,119,84,181,23,	0,10337,13596,16236,20230,
#Partially deleted in new
chr12	100072778	100092964	chr12:100072778-100092964	0	-	100072778	100086329	789624	6	35,119,183,84,181,62,	0,10237,11697,13496,16136,20124,
#Partially deleted in new
chr12	100072785	100092890	chr12:100072785-100092890	0	-	100072785	100086329	789624	5	28,119,84,181,169,	0,10230,13489,16129,19936,
#Partially deleted in new
chr12	100084532	100092890	chr12:100084532-100092890	0	-	100084532	100086329	789624	4	126,84,181,169,	0,1742,4382,8189,
#Partially deleted in new
chr12	100103934	100142824	chr12:100103934-100142824	0	-	100128631	100142635	789624	4	17,163,146,233,	0,4451,24645,38657,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	100143057	100144671	chr12:100143057-100144671	3	+	100143057	100143057	8553170	2	286,132,	0,1482,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	100156356	100161278	chr12:100156356-100161278	5	-	100156356	100156356	16724991	7	702,281,212,81,76,246,1507,	0,808,1171,1640,2441,2601,3415,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	100156416	100161650	chr12:100156416-100161650	4	-	100156416	100156416	16724991	3	642,575,3654,	0,748,1580,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	100156438	100162834	chr12:100156438-100162834	4	-	100156438	100156438	16724991	6	620,281,212,81,195,3877,	0,726,1089,1558,2240,2519,
#Partially deleted in new
chr12	100156620	100173159	chr12:100156620-100173159	5	-	100156620	100156620	16724991	20	212,143,92,97,212,81,76,246,93,333,88,107,90,136,60,102,89,51,39,48,	0,295,544,728,907,1376,2177,2337,9350,9710,10433,10716,10929,11839,12303,13945,14143,14316,14601,16491,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	100158501	100158765	chr12:100158501-100158765	3	-	100158501	100158501	8553170	1	264,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	100163241	100166176	chr12:100163241-100166176	4	-	100163241	100163241	16724991	1	2935,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	100165047	100173245	chr12:100165047-100173245	4	-	100165047	100165047	16724991	9	1093,306,108,90,182,276,103,51,134,	0,1283,2288,2502,3404,3876,5517,5889,8064,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	100173195	100196976	chr12:100173195-100196976	5	-	100173195	100173195	16724991	5	489,78,164,92,105,	0,3847,7357,22386,23676,
#Partially deleted in new
chr12	100173311	100199783	chr12:100173311-100199783	5	-	100173311	100173311	16724991	6	32,28,78,164,129,264,	0,345,3731,7241,25532,26208,
#Partially deleted in new
chr12	100173346	100177654	chr12:100173346-100177654	6	-	100173346	100173346	16724991	3	338,78,84,	0,3696,4224,
#Partially deleted in new
chr12	100180552	100199762	chr12:100180552-100199762	5	-	100180552	100180552	16724991	2	164,243,	0,18967,
#Deleted in new
chr12	100189883	100189949	chr12:100189883-100189949	3	+	100189883	100189883	5263520	1	66,	0,
#Partially deleted in new
chr12	100199121	100210320	chr12:100199121-100210320	0	+	100199126	100210320	789624	6	109,118,69,124,136,26,	0,5818,6554,8541,10951,11173,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	100199864	100241865	chr12:100199864-100241865	0	+	100200851	100210299	789624	10	1055,118,69,124,57,99,79,172,139,133,	0,5075,5811,7798,10430,12391,12585,18550,20143,41868,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	100200086	100224423	chr12:100200086-100224423	3	+	100200851	100223915	789624	11	833,118,69,124,136,57,99,79,172,139,638,	0,4853,5589,7576,9986,10208,12169,12363,18328,19921,23699,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	100200810	100207921	chr12:100200810-100207921	0	+	100200810	100200810	8553170	4	109,118,82,259,	0,4129,4865,6852,
#Partially deleted in new
chr12	100200815	100224424	chr12:100200815-100224424	1	+	100205735	100223915	789624	11	245,118,69,124,136,57,99,79,172,139,639,	0,4124,4860,6847,9257,9479,11440,11634,17599,19192,22970,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	100200816	100210135	chr12:100200816-100210135	0	+	100200851	100208827	789624	6	103,118,69,124,118,63,	0,4123,4859,6846,7955,9256,
#Partially deleted in new
chr12	100200816	100224423	chr12:100200816-100224423	0	+	100200851	100205756	789624	11	103,118,82,124,136,57,99,79,172,139,638,	0,4123,4859,6846,9256,9478,11439,11633,17598,19191,22969,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	100200816	100207921	chr12:100200816-100207921	0	+	100200816	100200816	8553170	4	103,118,69,259,	0,4123,4859,6846,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	100200816	100206258	chr12:100200816-100206258	0	+	100200816	100200816	8553170	4	103,118,69,61,	0,4123,4859,5381,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	100200825	100205473	chr12:100200825-100205473	0	+	100200825	100200825	8553170	2	94,534,	0,4114,
#Partially deleted in new
chr12	100200829	100218545	chr12:100200829-100218545	0	+	100200851	100205756	789624	8	90,118,82,124,57,99,79,131,	0,4110,4846,6833,9465,11426,11620,17585,
#Partially deleted in new
chr12	100200829	100224421	chr12:100200829-100224421	1	+	100200851	100223915	789624	11	90,118,69,124,136,57,99,79,172,79,636,	0,4110,4846,6833,9243,9465,11426,11620,17585,19238,22956,
#Partially deleted in new
chr12	100200850	100224357	chr12:100200850-100224357	1	+	100205735	100223915	789624	11	210,118,69,124,136,57,99,79,172,79,572,	0,4089,4825,6812,9222,9444,11405,11599,17564,19217,22935,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	100203668	100267079	chr12:100203668-100267079	0	-	100252529	100267076	789624	11	626,124,150,203,84,126,143,178,146,397,160,	0,18001,34299,37974,38817,48507,48725,52380,58595,59828,63251,
#Partially deleted in new
chr12	100237799	100252279	chr12:100237799-100252279	0	-	100237799	100237799	8553170	3	318,79,104,	0,11100,14376,
#Partially deleted in new
chr12	100241734	100252305	chr12:100241734-100252305	0	-	100241734	100241734	8553170	3	111,79,130,	0,7165,10441,
#Partially deleted in new
chr12	100252262	100267079	chr12:100252262-100267079	3	-	100252529	100267076	789624	5	274,178,146,397,160,	0,3786,10001,11234,14657,
#Partially deleted in new
chr12	100252457	100262356	chr12:100252457-100262356	0	-	100252529	100262356	789624	4	79,178,39,93,	0,3591,9272,9806,
#Partially deleted in new
chr12	100252479	100267079	chr12:100252479-100267079	0	-	100262392	100267076	789624	5	57,227,178,146,160,	0,1009,3569,9784,14440,
#Partially deleted in new
chr12	100252479	100267079	chr12:100252479-100267079	0	-	100252479	100267076	789624	7	57,227,178,39,146,196,160,	0,1009,3569,9250,9784,11017,14440,
#Partially deleted in new
chr12	100252479	100267079	chr12:100252479-100267079	0	-	100262392	100267076	789624	4	57,178,146,160,	0,3569,9784,14440,
#Partially deleted in new
chr12	100252479	100267079	chr12:100252479-100267079	0	-	100252479	100267076	789624	6	57,227,178,146,397,160,	0,1009,3569,9784,11017,14440,
#Partially deleted in new
chr12	100255872	100267055	chr12:100255872-100267055	0	-	100256044	100267055	789624	4	354,146,397,136,	0,6391,7624,11047,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	100257687	100257790	chr12:100257687-100257790	3	-	100257687	100257687	8553170	1	103,	0,
#Partially deleted in new
chr12	100267139	100337404	chr12:100267139-100337404	0	+	100282970	100337404	789624	17	257,205,158,145,150,222,117,126,177,123,114,133,119,101,67,96,18,	0,15803,24363,30891,43904,45292,46282,47349,48418,50663,56385,59482,62061,67026,68485,68671,70247,
#Partially deleted in new
chr12	100267176	100312548	chr12:100267176-100312548	0	+	100311082	100312548	789624	5	220,158,145,150,117,	0,24326,30854,43867,45255,
#Partially deleted in new
chr12	100267245	100340139	chr12:100267245-100340139	1	+	100282970	100339172	789624	19	151,205,158,145,150,222,117,126,177,12,123,114,133,119,101,67,96,120,1612,	0,15697,24257,30785,43798,45186,46176,47243,48312,50435,50557,56279,59376,61955,66920,68379,68565,70141,71282,
#Partially deleted in new
chr12	100267248	100296807	chr12:100267248-100296807	0	+	100267248	100267248	8553170	4	148,205,158,46,	0,15694,24254,29513,
#Partially deleted in new
chr12	100267383	100341724	chr12:100267383-100341724	3	+	100282970	100339172	789624	18	409,205,158,145,150,222,117,126,177,123,114,133,119,101,67,96,120,3197,	0,15559,24119,30647,43660,45048,46038,47105,48174,50419,56141,59238,61817,66782,68241,68427,70003,71144,
#Partially deleted in new
chr12	100283131	100291989	chr12:100283131-100291989	0	+	100283131	100283131	8553170	2	16,487,	0,8371,
#Partially deleted in new
chr12	100315557	100326645	chr12:100315557-100326645	0	+	100315557	100319268	789624	5	177,123,63,114,24,	0,2245,3666,7967,11064,
#Partially deleted in new
chr12	100317714	100323836	chr12:100317714-100323836	0	+	100317714	100317714	8553170	2	211,312,	0,5810,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	100323597	100334251	chr12:100323597-100334251	0	+	100323597	100327192	789624	5	41,133,50,119,86,	0,3024,3587,5603,10568,
#Deleted in new
chr12	100333646	100337497	chr12:100333646-100337497	0	+	100333646	100333646	8553170	4	620,67,96,111,	0,1978,2164,3740,
#Partially deleted in new
chr12	100335590	100338633	chr12:100335590-100338633	0	+	100335590	100335590	8553170	3	316,120,106,	0,1796,2937,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	100357078	100422059	chr12:100357078-100422059	3	+	100357391	100420159	789624	12	414,253,119,115,88,87,140,150,133,111,128,2245,	0,23622,33922,36290,39251,44698,45261,45517,46959,55691,60950,62736,
#Partially deleted in new
chr12	100357367	100420252	chr12:100357367-100420252	1	+	100357391	100420159	789624	11	125,253,119,115,88,87,140,133,111,128,438,	0,23333,33633,36001,38962,44409,44972,46670,55402,60661,62447,
#Partially deleted in new
chr12	100402617	100404380	chr12:100402617-100404380	0	+	100402617	100402617	8553170	2	128,343,	0,1420,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	100410620	100420089	chr12:100410620-100420089	0	+	100410620	100410620	8553170	4	79,111,128,275,	0,2149,7408,9194,
#Partially deleted in new
chr12	100473707	100564413	chr12:100473707-100564413	3	+	100493323	100563489	0	11	352,135,133,366,141,134,99,100,147,114,1163,	0,18795,19562,37070,58750,61182,62804,63240,66964,88177,89543,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	100473892	100505782	chr12:100473892-100505782	1	+	100493323	100505633	8553170	5	167,167,135,133,208,	0,16923,18610,19377,31682,
#Partially deleted in new
chr12	100473915	100563511	chr12:100473915-100563511	0	+	100493323	100536599	789624	11	144,135,133,366,141,134,104,100,147,114,261,	0,18587,19354,36862,58542,60974,62591,63032,66756,87969,89335,
#Partially deleted in new
chr12	100473915	100563503	chr12:100473915-100563503	1	+	100493323	100563489	0	11	144,135,133,366,153,134,99,100,147,114,253,	0,18587,19354,36862,58542,60974,62596,63032,66756,87969,89335,
#Partially deleted in new
chr12	100473915	100563511	chr12:100473915-100563511	1	+	100493323	100563489	0	10	144,135,133,366,134,99,100,147,114,261,	0,18587,19354,36862,60974,62596,63032,66756,87969,89335,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	100473950	100563867	chr12:100473950-100563867	1	+	100493323	100563489	789624	12	109,167,135,133,366,153,134,99,100,147,114,617,	0,16865,18552,19319,36827,58507,60939,62561,62997,66721,87934,89300,
#Partially deleted in new
chr12	100473954	100505766	chr12:100473954-100505766	1	+	100493323	100505633	789624	4	105,135,133,192,	0,18548,19315,31620,
#Partially deleted in new
chr12	100474001	100505796	chr12:100474001-100505796	0	+	100493323	100499947	789624	5	58,135,133,172,222,	0,18501,19268,25851,31573,
#Partially deleted in new
chr12	100503359	100563642	chr12:100503359-100563642	1	+	100503387	100563489	0	9	137,366,141,134,99,100,147,114,392,	0,7418,29098,31530,33152,33588,37312,58525,59891,
#Partially deleted in new
chr12	100503359	100563489	chr12:100503359-100563489	1	+	100503387	100563489	0	9	137,366,153,134,99,100,147,114,239,	0,7418,29098,31530,33152,33588,37312,58525,59891,
#Partially deleted in new
chr12	100503452	100505824	chr12:100503452-100505824	0	+	100503452	100505633	789624	2	44,250,	0,2122,
#Deleted in new
chr12	100525185	100525420	chr12:100525185-100525420	7	-	100525185	100525185	16724991	1	235,	0,
#Partially deleted in new
chr12	100573682	100624890	chr12:100573682-100624890	1	+	100594904	100624890	789624	9	103,48,169,116,142,64,139,108,1329,	0,21192,26699,27955,38317,44061,44766,48592,49879,
#Partially deleted in new
chr12	100573710	100624919	chr12:100573710-100624919	3	+	100594904	100624890	789624	10	75,121,48,169,116,142,64,139,108,1358,	0,18025,21164,26671,27927,38289,44033,44738,48564,49851,
#Partially deleted in new
chr12	100573722	100591801	chr12:100573722-100591801	0	+	100573722	100573722	8553170	3	63,214,66,	0,4864,18013,
#Partially deleted in new
chr12	100573808	100600511	chr12:100573808-100600511	0	+	100594904	100600511	789624	5	192,121,76,48,130,	0,17927,18565,21066,26573,
#Deleted in new
chr12	100578743	100580197	chr12:100578743-100580197	7	+	100578743	100578743	16724991	1	1454,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	100593617	100624905	chr12:100593617-100624905	1	+	100612008	100624890	789624	10	356,48,169,116,256,142,64,139,108,1344,	0,1257,6764,8020,17390,18382,24126,24831,28657,29944,
#Partially deleted in new
chr12	100594773	100624903	chr12:100594773-100624903	1	+	100594904	100624890	789624	8	149,169,116,142,64,139,108,1342,	0,5608,6864,17226,22970,23675,27501,28788,
#Partially deleted in new
chr12	100601641	100612534	chr12:100601641-100612534	0	+	100601641	100601641	8553170	2	112,535,	0,10358,
#Partially deleted in new
chr12	100612100	100618687	chr12:100612100-100618687	0	+	100612100	100612100	8553170	3	41,64,239,	0,5643,6348,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	100623714	100628286	chr12:100623714-100628286	0	+	100623714	100624890	789624	2	3150,798,	0,3774,
#Partially deleted in new
chr12	100717525	101020124	chr12:100717525-101020124	0	+	100717525	100974798	789624	11	22,84,252,195,105,137,159,101,107,132,91,	0,16248,22328,184120,204700,221789,224851,253780,257257,270013,302508,
#Partially deleted in new
chr12	100717525	101128287	chr12:100717525-101128287	1	+	100717525	101127070	789624	30	22,84,252,195,105,137,159,101,45,132,107,56,122,135,97,61,83,141,165,37,112,58,98,143,153,148,120,106,196,427,	0,16248,22328,184120,204700,221789,224851,253780,257319,270013,302508,319569,322429,324808,326013,330815,361667,366152,369134,376730,379010,380125,380322,382052,392878,394037,399153,402994,409353,410335,
#Partially deleted in new
chr12	100794595	100901681	chr12:100794595-100901681	0	+	100794595	100794595	8553170	3	432,86,36,	0,57772,107050,
#Partially deleted in new
chr12	100794777	100901818	chr12:100794777-100901818	0	+	100901785	100901818	789624	4	250,52,96,173,	0,47408,90671,106868,
#Partially deleted in new
chr12	100794806	101128641	chr12:100794806-101128641	3	+	100901785	101127070	789624	27	221,195,137,159,101,45,132,107,56,122,135,97,61,83,141,165,37,112,58,98,143,153,148,120,106,196,781,	0,106839,144508,147570,176499,180038,192732,225227,242288,245148,247527,248732,253534,284386,288871,291853,299449,301729,302844,303041,304771,315597,316756,321872,325713,332072,333054,
#Partially deleted in new
chr12	100794957	101128287	chr12:100794957-101128287	1	+	100901785	101127070	789624	28	70,195,105,137,159,101,45,132,107,56,122,135,97,61,83,141,165,37,112,58,98,143,153,148,120,106,196,427,	0,106688,127268,144357,147419,176348,179887,192581,225076,242137,244997,247376,248581,253383,284235,288720,291702,299298,301578,302693,302890,304620,315446,316605,321721,325562,331921,332903,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	100852330	100859262	chr12:100852330-100859262	3	-	100852330	100852330	8553170	2	188,198,	0,6734,
#Partially deleted in new
chr12	100987118	101042381	chr12:100987118-101042381	0	+	100987118	100987118	8553170	6	72,132,107,56,122,48,	0,420,32915,49976,52836,55215,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	101038419	101039094	chr12:101038419-101039094	3	-	101038419	101038419	8553170	2	488,69,	0,606,
#Partially deleted in new
chr12	101042379	101086813	chr12:101042379-101086813	0	+	101042379	101042379	8553170	4	89,97,61,154,	0,1159,5961,44280,
#Partially deleted in new
chr12	101047987	101128627	chr12:101047987-101128627	0	+	101047987	101047987	8553170	15	46,61,83,165,37,112,58,98,143,153,148,120,106,196,767,	0,353,31205,38672,46268,48548,49663,49860,51590,62416,63575,68691,72532,78891,79873,
#Partially deleted in new
chr12	101066733	101069232	chr12:101066733-101069232	7	+	101066733	101066733	16724991	2	311,945,	0,1554,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	101155492	101210407	chr12:101155492-101210407	3	-	101157278	101209848	789624	15	1909,80,104,206,87,68,113,89,130,141,155,68,52,66,910,	0,2756,6481,11001,12603,24536,27310,28641,31893,34975,38132,39602,46671,49007,54005,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	101199270	101199377	chr12:101199270-101199377	3	-	101199270	101199270	8553170	1	107,	0,
#Deleted in new
chr12	101228140	101228876	chr12:101228140-101228876	7	-	101228140	101228140	16724991	1	736,	0,
#Boundary problem: need 62, got 0, diff 62, mapped 0.0
chr12	101280108	101386616	chr12:101280108-101386616	3	+	101280282	101386123	789624	62	219,81,67,133,189,82,138,156,147,135,78,179,156,89,106,151,63,159,77,80,241,186,91,86,126,167,209,144,80,227,145,88,144,51,153,156,141,138,140,83,287,140,157,99,168,167,142,117,171,132,111,80,70,183,132,133,188,72,273,127,146,649,	0,1007,5461,5640,6212,8851,10028,10624,11633,11861,13059,15371,19573,19864,22339,25806,26590,28076,29654,31610,31927,37369,39436,40743,41395,46972,49132,53192,54316,57942,58704,60414,62337,62678,62832,64486,65445,66342,71946,72938,74723,76445,76817,81853,83467,85350,86449,87751,89612,90323,90949,92775,93292,93476,94699,95515,99262,101031,102932,103434,105474,105859,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	101280127	101291427	chr12:101280127-101291427	0	+	101280127	101280127	8553170	8	200,81,67,133,189,82,138,695,	0,988,5442,5621,6193,8832,10009,10605,
#Deleted in new
chr12	101289902	101290961	chr12:101289902-101290961	0	+	101289902	101289902	8553170	2	372,229,	0,830,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	101326854	101329345	chr12:101326854-101329345	0	+	101326854	101326854	8553170	2	393,105,	0,2386,
#Partially deleted in new
chr12	101393119	101407820	chr12:101393119-101407820	3	-	101395639	101407645	0	6	2551,179,112,82,138,179,	0,3279,7942,9745,12724,14522,
#Partially deleted in new
chr12	101394917	101407746	chr12:101394917-101407746	1	-	101395639	101407645	789624	5	753,179,112,82,105,	0,1481,6144,7947,12724,
#Partially deleted in new
chr12	101394943	101407461	chr12:101394943-101407461	1	-	101395639	101405934	0	6	727,179,112,82,138,84,	0,1455,6118,7921,10900,12434,
#Partially deleted in new
chr12	101395487	101407749	chr12:101395487-101407749	1	-	101395639	101396526	789624	3	183,179,108,	0,911,12154,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	101395506	101401486	chr12:101395506-101401486	0	-	101395506	101395506	8553170	3	164,179,425,	0,892,5555,
#Partially deleted in new
chr12	101395591	101407463	chr12:101395591-101407463	1	-	101395639	101405934	0	6	79,179,112,82,138,186,	0,807,5470,7273,10252,11686,
#Partially deleted in new
chr12	101396142	101407753	chr12:101396142-101407753	1	-	101396328	101407645	789624	5	435,112,82,138,112,	0,4919,6722,9701,11499,
#Partially deleted in new
chr12	101396413	101407762	chr12:101396413-101407762	0	-	101403202	101407645	789624	6	164,112,82,114,138,121,	0,4648,6451,6728,9430,11228,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	101403415	101407756	chr12:101403415-101407756	0	-	101403415	101403415	8553170	3	284,326,115,	0,2240,4226,
#Deleted in new
chr12	101405883	101407502	chr12:101405883-101407502	0	-	101405883	101405934	789624	2	98,492,	0,1127,
#Partially deleted in new
chr12	101408371	101409060	chr12:101408371-101409060	3	-	101408371	101408371	8553170	2	160,219,	0,470,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	101411356	101411459	chr12:101411356-101411459	3	+	101411356	101411356	8553170	1	103,	0,
#Partially deleted in new
chr12	101424440	101424691	chr12:101424440-101424691	7	+	101424440	101424440	16724991	1	251,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	101446824	101446932	chr12:101446824-101446932	3	+	101446824	101446824	8553170	1	108,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	101466704	101466820	chr12:101466704-101466820	3	+	101466704	101466704	8553170	1	116,	0,
#Partially deleted in new
chr12	101472338	101472456	chr12:101472338-101472456	7	+	101472338	101472338	16724991	1	118,	0,
#Partially deleted in new
chr12	101475420	101486997	chr12:101475420-101486997	3	+	101476904	101486771	789624	6	82,80,94,113,109,654,	0,1407,2137,4161,7371,10923,
#Partially deleted in new
chr12	101568352	101642439	chr12:101568352-101642439	0	+	101631653	101642439	789624	7	153,111,149,118,52,57,21,	0,61081,63218,63668,66201,68319,74066,
#Partially deleted in new
chr12	101594848	101685811	chr12:101594848-101685811	1	+	101595070	101684405	0	28	247,111,149,118,52,57,167,133,125,106,167,163,107,134,160,105,189,135,168,89,196,140,160,137,187,59,43,230,	0,34585,36722,37172,39705,41823,47570,49815,51914,53196,54411,56382,57829,58266,64823,66309,67509,68577,72883,75472,78578,80443,82386,83253,85494,87755,89533,90733,
#Partially deleted in new
chr12	101594968	101685869	chr12:101594968-101685869	1	+	101595070	101685632	0	30	127,36,42,111,149,118,52,57,167,133,125,106,167,163,107,134,160,105,189,135,54,168,89,196,140,160,137,187,59,288,	0,19527,22233,34465,36602,37052,39585,41703,47450,49695,51794,53076,54291,56262,57709,58146,64703,66189,67389,68457,71775,72763,75352,78458,80323,82266,83133,85374,87635,90613,
#Partially deleted in new
chr12	101594970	101685876	chr12:101594970-101685876	1	+	101595070	101684395	0	31	125,36,42,39,36,111,149,118,52,57,167,133,125,106,167,163,107,134,160,105,189,135,168,89,196,140,160,137,187,43,295,	0,19525,22231,31901,32798,34463,36600,37050,39583,41701,47448,49693,51792,53074,54289,56260,57707,58144,64701,66187,67387,68455,72761,75350,78456,80321,82264,83131,85372,89411,90611,
#Partially deleted in new
chr12	101594970	101685806	chr12:101594970-101685806	1	+	101595070	101685682	0	27	125,39,111,149,118,52,57,167,133,125,106,167,163,107,134,160,105,189,135,168,89,196,140,160,137,187,225,	0,31901,34463,36600,37050,39583,41701,47448,49693,51792,53074,54289,56260,57707,58144,64701,66187,67387,68455,72761,75350,78456,80321,82264,83131,85372,90611,
#Partially deleted in new
chr12	101594970	101685812	chr12:101594970-101685812	1	+	101595070	101684405	789624	29	125,36,111,149,118,52,57,167,133,125,106,167,163,107,134,160,105,189,135,168,89,196,140,160,137,187,59,43,231,	0,19525,34463,36600,37050,39583,41701,47448,49693,51792,53074,54289,56260,57707,58144,64701,66187,67387,68455,72761,75350,78456,80321,82264,83131,85372,87633,89411,90611,
#Partially deleted in new
chr12	101594970	101628180	chr12:101594970-101628180	0	+	101594970	101594970	8553170	5	125,36,42,39,412,	0,19525,22231,31901,32798,
#Partially deleted in new
chr12	101594970	101686018	chr12:101594970-101686018	1	+	101595070	101684395	789624	31	125,36,42,39,111,149,118,52,57,167,133,125,106,167,163,107,134,160,105,189,135,54,168,89,196,140,160,137,187,43,437,	0,19525,22231,31901,34463,36600,37050,39583,41701,47448,49693,51792,53074,54289,56260,57707,58144,64701,66187,67387,68455,71773,72761,75350,78456,80321,82264,83131,85372,89411,90611,
#Partially deleted in new
chr12	101594970	101685880	chr12:101594970-101685880	0	+	101594970	101594970	8553170	5	125,449,59,43,299,	0,19525,87633,89411,90611,
#Partially deleted in new
chr12	101594983	101685870	chr12:101594983-101685870	1	+	101595070	101684395	0	29	112,36,42,111,149,118,52,57,167,133,125,106,167,163,107,134,160,105,189,135,168,89,196,140,160,137,187,43,289,	0,19512,22218,34450,36587,37037,39570,41688,47435,49680,51779,53061,54276,56247,57694,58131,64688,66174,67374,68442,72748,75337,78443,80308,82251,83118,85359,89398,90598,
#Partially deleted in new
chr12	101594995	101685870	chr12:101594995-101685870	3	+	101595070	101684405	0	32	100,36,42,39,36,111,149,118,52,57,167,133,125,106,167,163,107,134,160,105,189,135,168,89,196,140,160,137,187,59,43,289,	0,19500,22206,31876,32773,34438,36575,37025,39558,41676,47423,49668,51767,53049,54264,56235,57682,58119,64676,66162,67362,68430,72736,75325,78431,80296,82239,83106,85347,87608,89386,90586,
#Partially deleted in new
chr12	101594995	101685615	chr12:101594995-101685615	1	+	101595070	101684405	0	29	100,36,42,111,149,118,52,167,133,125,106,167,163,107,134,160,105,189,135,168,89,196,140,160,137,187,59,43,34,	0,19500,22206,34438,36575,37025,39558,47423,49668,51767,53049,54264,56235,57682,58119,64676,66162,67362,68430,72736,75325,78431,80296,82239,83106,85347,87608,89386,90586,
#Partially deleted in new
chr12	101594995	101685615	chr12:101594995-101685615	1	+	101595070	101684405	0	29	100,42,111,149,118,52,57,167,133,125,106,167,163,107,134,160,105,189,135,168,89,196,140,160,137,187,59,43,34,	0,22206,34438,36575,37025,39558,41676,47423,49668,51767,53049,54264,56235,57682,58119,64676,66162,67362,68430,72736,75325,78431,80296,82239,83106,85347,87608,89386,90586,
#Partially deleted in new
chr12	101594995	101685615	chr12:101594995-101685615	1	+	101595070	101684405	0	30	100,36,42,111,149,118,52,57,167,133,125,106,167,163,107,134,160,105,189,135,168,89,196,140,160,137,187,59,43,34,	0,19500,22206,34438,36575,37025,39558,41676,47423,49668,51767,53049,54264,56235,57682,58119,64676,66162,67362,68430,72736,75325,78431,80296,82239,83106,85347,87608,89386,90586,
#Partially deleted in new
chr12	101594996	101685869	chr12:101594996-101685869	1	+	101631653	101684395	789624	32	99,96,36,42,39,36,111,149,118,52,57,167,133,125,106,167,163,107,134,160,105,189,135,168,89,196,140,160,137,187,43,288,	0,5363,19499,22205,31875,32772,34437,36574,37024,39557,41675,47422,49667,51766,53048,54263,56234,57681,58118,64675,66161,67361,68429,72735,75324,78430,80295,82238,83105,85346,89385,90585,
#Partially deleted in new
chr12	101595070	101684395	chr12:101595070-101684395	1	+	101595070	101684395	0	29	25,36,42,111,149,118,52,57,167,133,125,106,167,163,107,134,160,105,189,135,54,168,89,196,140,160,137,187,14,	0,19425,22131,34363,36500,36950,39483,41601,47348,49593,51692,52974,54189,56160,57607,58044,64601,66087,67287,68355,71673,72661,75250,78356,80221,82164,83031,85272,89311,
#Partially deleted in new
chr12	101617178	101642449	chr12:101617178-101642449	0	+	101617178	101617178	8553170	7	65,111,149,118,52,57,31,	0,12255,14392,14842,17375,19493,25240,
#Partially deleted in new
chr12	101626851	101637150	chr12:101626851-101637150	0	+	101626851	101626851	8553170	6	59,111,149,118,52,479,	0,2582,4719,5169,7702,9820,
#Partially deleted in new
chr12	101629025	101632122	chr12:101629025-101632122	0	+	101629025	101629025	8553170	3	519,149,102,	0,2545,2995,
#Partially deleted in new
chr12	101646719	101659970	chr12:101646719-101659970	3	-	101646719	101646719	8553170	2	309,257,	0,12994,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	101646719	101650948	chr12:101646719-101650948	0	-	101646719	101646719	8553170	2	309,133,	0,4096,
#Partially deleted in new
chr12	101659999	101661246	chr12:101659999-101661246	0	+	101659999	101659999	8553170	2	485,89,	0,1158,
#Partially deleted in new
chr12	101664422	101673484	chr12:101664422-101673484	0	+	101664422	101664422	8553170	5	200,54,168,89,58,	0,2321,3309,5898,9004,
#Partially deleted in new
chr12	101664439	101670409	chr12:101664439-101670409	0	+	101664439	101664439	8553170	3	183,168,89,	0,3292,5881,
#Partially deleted in new
chr12	101666202	101685811	chr12:101666202-101685811	0	+	101666202	101666202	8553170	9	595,168,89,196,140,160,137,187,230,	0,1529,4118,7224,9089,11032,11899,14140,19379,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	101696001	101696450	chr12:101696001-101696450	3	-	101696001	101696001	8553170	1	449,	0,
#Partially deleted in new
chr12	101696946	101720226	chr12:101696946-101720226	0	+	101696946	101696946	8553170	6	82,148,142,193,85,104,	0,17143,17557,17937,19781,23176,
#Partially deleted in new
chr12	101697626	101729074	chr12:101697626-101729074	3	+	101697861	101728945	789624	9	508,148,142,85,132,159,126,111,174,	0,16463,16877,19101,22496,25541,26095,28667,31274,
#Partially deleted in new
chr12	101697671	101727039	chr12:101697671-101727039	1	+	101697861	101726425	789624	8	463,148,142,85,132,159,126,746,	0,16418,16832,19056,22451,25496,26050,28622,
#Partially deleted in new
chr12	101697691	101729016	chr12:101697691-101729016	0	+	101697861	101726425	789624	9	443,148,142,85,132,159,126,208,109,	0,16398,16812,19036,22431,25476,26030,28602,31216,
#Partially deleted in new
chr12	101697691	101729051	chr12:101697691-101729051	0	+	101697861	101719498	789624	10	443,148,142,85,27,132,159,126,111,151,	0,16398,16812,19036,21798,22431,25476,26030,28602,31209,
#Partially deleted in new
chr12	101697853	101714284	chr12:101697853-101714284	0	+	101697853	101697853	8553170	2	281,195,	0,16236,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	101697964	101729646	chr12:101697964-101729646	0	+	101697964	101719498	789624	9	170,148,142,85,27,132,159,126,3353,	0,16125,16539,18763,21525,22158,25203,25757,28329,
#Partially deleted in new
chr12	101714527	101723254	chr12:101714527-101723254	0	+	101714527	101717317	789624	5	118,85,158,132,87,	0,2200,2709,5595,8640,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	101726322	101744140	chr12:101726322-101744140	0	+	101726322	101730553	789624	3	82,116,426,	0,4198,17392,
#Partially deleted in new
chr12	101728647	101739426	chr12:101728647-101739426	1	-	101728926	101737935	0	9	333,105,99,100,118,35,67,146,65,	0,461,2920,4927,6279,8389,8584,9155,10714,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	101728647	101739472	chr12:101728647-101739472	0	-	101728647	101728647	8553170	6	333,105,2107,118,916,111,	0,461,2920,6279,8389,10714,
#Partially deleted in new
chr12	101728647	101731666	chr12:101728647-101731666	0	-	101728647	101728647	8553170	2	566,99,	0,2920,
#Partially deleted in new
chr12	101728649	101739469	chr12:101728649-101739469	3	-	101728926	101737935	0	9	331,105,99,100,118,35,67,146,119,	0,459,2918,4925,6277,8387,8582,9153,10701,
#Partially deleted in new
chr12	101728872	101739413	chr12:101728872-101739413	1	-	101728926	101737935	0	9	108,105,99,100,118,35,67,150,63,	0,236,2695,4702,6054,8164,8359,8930,10478,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	101739577	101744010	chr12:101739577-101744010	0	+	101739577	101739577	8553170	3	192,110,296,	0,2819,4137,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr12	101745496	101830938	chr12:101745496-101830938	3	-	101747163	101830675	0	21	1745,91,168,99,86,114,220,200,1103,204,124,171,180,162,135,65,206,42,120,86,380,	0,3604,7875,11715,12075,14533,15630,16067,18705,20594,22540,24524,24909,25499,34655,35060,40515,43051,44441,51180,85062,
#Partially deleted in new
chr12	101749141	101757657	chr12:101749141-101757657	0	-	101756460	101757657	789624	5	50,168,147,99,86,	0,4230,7278,8070,8430,
#Partially deleted in new
chr12	101756214	101760090	chr12:101756214-101760090	0	-	101756460	101760090	789624	4	352,99,86,61,	0,997,1357,3815,
#Partially deleted in new
chr12	101756941	101760144	chr12:101756941-101760144	0	-	101756941	101756941	8553170	3	369,86,115,	0,630,3088,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	101765405	101765509	chr12:101765405-101765509	3	-	101765405	101765405	8553170	1	104,	0,
#Partially deleted in new
chr12	101765760	101768103	chr12:101765760-101768103	0	-	101765760	101765760	8553170	2	534,67,	0,2276,
#Partially deleted in new
chr12	101767909	101830818	chr12:101767909-101830818	1	-	101767971	101830675	0	11	251,171,180,162,135,65,206,42,120,86,260,	0,2111,2496,3086,12242,12647,18102,20638,22028,28767,62649,
#Deleted in new
chr12	101773113	101773421	chr12:101773113-101773421	5	-	101773113	101773113	16724991	1	308,	0,
#Deleted in new
chr12	101773187	101773755	chr12:101773187-101773755	7	-	101773187	101773187	16724991	1	568,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	101778289	101786216	chr12:101778289-101786216	0	-	101780139	101786216	789624	3	1997,65,205,	0,2267,7722,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	101779813	101779929	chr12:101779813-101779929	7	+	101779813	101779813	16724991	1	116,	0,
#Partially deleted in new
chr12	101785589	101790054	chr12:101785589-101790054	0	-	101785589	101785589	8553170	3	628,42,117,	0,2958,4348,
#Partially deleted in new
chr12	101795870	101830663	chr12:101795870-101830663	0	-	101795870	101795870	8553170	4	392,86,132,105,	0,806,14656,34688,
#Partially deleted in new
chr12	101795873	101830843	chr12:101795873-101830843	1	-	101796249	101830675	789624	3	389,86,285,	0,803,34685,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	101796409	101796502	chr12:101796409-101796502	3	-	101796409	101796409	8553170	1	93,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	101796510	101830679	chr12:101796510-101830679	1	-	101796672	101830675	789624	2	252,121,	0,34048,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	101836819	101836927	chr12:101836819-101836927	7	+	101836819	101836819	16724991	1	108,	0,
#Deleted in new
chr12	101873315	101873623	chr12:101873315-101873623	7	-	101873315	101873315	16724991	1	308,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	101877350	101923623	chr12:101877350-101923623	3	+	101877789	101921260	789624	7	570,68,143,178,59,93,2408,	0,20512,23940,30835,36823,42758,43865,
#Partially deleted in new
chr12	101877682	101921814	chr12:101877682-101921814	1	+	101877789	101921260	789624	4	238,68,143,599,	0,20180,23608,43533,
#Partially deleted in new
chr12	101877690	101921542	chr12:101877690-101921542	0	+	101877789	101914176	789624	6	230,68,143,59,93,327,	0,20172,23600,36483,42418,43525,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	101877796	101908327	chr12:101877796-101908327	0	+	101877796	101890103	789624	5	124,134,68,143,142,	0,12291,20066,23494,30389,
#Partially deleted in new
chr12	101897893	101901552	chr12:101897893-101901552	0	+	101897893	101897893	8553170	2	37,262,	0,3397,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	101908313	102012130	chr12:101908313-102012130	0	+	101908313	102011863	789624	3	50,59,318,	0,5860,103499,
#Partially deleted in new
chr12	101920018	101921567	chr12:101920018-101921567	0	+	101920018	101920018	8553170	2	183,352,	0,1197,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	101923409	101924719	chr12:101923409-101924719	3	-	101923409	101923409	8553170	3	56,144,364,	0,346,946,
#Deleted in new
chr12	101936215	101936674	chr12:101936215-101936674	7	+	101936215	101936215	16724991	1	459,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	101954997	101962390	chr12:101954997-101962390	3	-	101954997	101954997	8553170	2	893,141,	0,7252,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	101957212	101962390	chr12:101957212-101962390	1	-	101957212	101957212	8553170	3	189,93,141,	0,3817,5037,
#Deleted in new
chr12	101963900	101964340	chr12:101963900-101964340	7	+	101963900	101963900	16724991	1	440,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	102012926	102061974	chr12:102012926-102061974	0	-	102048394	102061962	789624	8	266,65,111,108,66,108,99,63,	0,13047,26941,31178,33127,35363,48321,48985,
#Partially deleted in new
chr12	102012938	102062124	chr12:102012938-102062124	3	-	102013107	102061962	789624	7	254,65,111,108,66,99,213,	0,13035,26929,31166,33115,48309,48973,
#Partially deleted in new
chr12	102012941	102062073	chr12:102012941-102062073	0	-	102017780	102061962	789624	8	251,86,65,108,108,66,99,162,	0,4778,13032,26926,31163,33112,48306,48970,
#Partially deleted in new
chr12	102012941	102062079	chr12:102012941-102062079	1	-	102013107	102061962	789624	7	251,65,108,108,66,99,168,	0,13032,26926,31163,33112,48306,48970,
#Partially deleted in new
chr12	102012942	102062000	chr12:102012942-102062000	0	-	102019361	102061962	789624	8	250,95,65,111,108,66,99,89,	0,6334,13031,26925,31162,33111,48305,48969,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	102012943	102062034	chr12:102012943-102062034	0	-	102050255	102061962	789624	8	249,65,108,108,66,103,99,123,	0,13030,26924,31161,33110,37245,48304,48968,
#Partially deleted in new
chr12	102012945	102040434	chr12:102012945-102040434	0	-	102012945	102012945	8553170	3	247,65,567,	0,13028,26922,
#Partially deleted in new
chr12	102012954	102046119	chr12:102012954-102046119	0	-	102013107	102046119	789624	4	238,65,108,66,	0,13019,31150,33099,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	102019276	102062149	chr12:102019276-102062149	0	-	102019276	102019276	8553170	8	95,65,108,108,66,103,99,44,	0,6697,20591,24828,26777,30912,41971,42829,
#Partially deleted in new
chr12	102025920	102061978	chr12:102025920-102061978	0	-	102025920	102025920	8553170	6	118,111,108,66,99,67,	0,13947,18184,20133,35327,35991,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	102039883	102062012	chr12:102039883-102062012	0	-	102050555	102061962	789624	6	92,108,66,122,99,101,	0,4221,6170,10634,21364,22028,
#Partially deleted in new
chr12	102043614	102061991	chr12:102043614-102061991	0	-	102043614	102043614	8553170	4	598,66,99,80,	0,2439,17633,18297,
#Partially deleted in new
chr12	102059663	102061974	chr12:102059663-102061974	0	-	102059663	102059663	8553170	3	127,99,63,	0,1584,2248,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	102073102	102120124	chr12:102073102-102120124	3	-	102074353	102118518	0	10	1365,94,51,182,91,95,73,125,221,75,	0,1898,3694,4219,12663,26003,27929,39005,45260,46947,
#Partially deleted in new
chr12	102074188	102077000	chr12:102074188-102077000	0	-	102074188	102074188	8553170	3	279,94,204,	0,812,2608,
#Partially deleted in new
chr12	102074196	102118583	chr12:102074196-102118583	1	-	102074353	102118518	0	9	271,94,51,182,91,95,73,125,221,	0,804,2600,3125,11569,24909,26835,37911,44166,
#Partially deleted in new
chr12	102074244	102085855	chr12:102074244-102085855	0	-	102079210	102085855	789624	6	223,94,51,182,158,90,	0,756,2552,3077,4814,11521,
#Partially deleted in new
chr12	102074435	102120120	chr12:102074435-102120120	0	-	102074435	102118518	789624	8	32,94,51,95,73,125,221,71,	0,565,2361,24670,26596,37672,43927,45614,
#Partially deleted in new
chr12	102076992	102120091	chr12:102076992-102120091	0	-	102076992	102076992	8553170	7	511,91,95,73,125,221,42,	0,8773,22113,24039,35115,41370,43057,
#Partially deleted in new
chr12	102079077	102120089	chr12:102079077-102120089	0	-	102079077	102079077	8553170	7	139,91,95,73,125,221,40,	0,6688,20028,21954,33030,39285,40972,
#Partially deleted in new
chr12	102112174	102120090	chr12:102112174-102120090	0	-	102112174	102112174	8553170	4	58,62,221,41,	0,3628,6188,7875,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	102118364	102119420	chr12:102118364-102119420	0	-	102118364	102118518	789624	2	219,426,	0,630,
#Partially deleted in new
chr12	102120184	102196667	chr12:102120184-102196667	1	+	102123888	102196291	789624	12	102,156,234,231,108,171,155,184,179,79,136,717,	0,3701,28045,31385,33684,44253,45544,55298,58407,62364,75127,75766,
#Partially deleted in new
chr12	102120194	102196368	chr12:102120194-102196368	1	+	102123888	102196023	789624	5	92,156,171,155,418,	0,3691,44243,45534,75756,
#Partially deleted in new
chr12	102120203	102151823	chr12:102120203-102151823	0	+	102123888	102150311	789624	5	83,156,234,108,254,	0,3682,28026,30060,31366,
#Partially deleted in new
chr12	102120244	102197520	chr12:102120244-102197520	3	+	102123888	102196291	789624	11	42,156,234,108,171,155,184,179,79,136,1570,	0,3641,27985,33624,44193,45484,55238,58347,62304,75067,75706,
#Partially deleted in new
chr12	102120244	102149007	chr12:102120244-102149007	1	+	102123888	102148478	789624	3	42,156,778,	0,3641,27985,
#Partially deleted in new
chr12	102120246	102196429	chr12:102120246-102196429	1	+	102148319	102196291	789624	11	40,156,229,108,171,155,184,179,79,136,479,	0,3639,27988,33622,44191,45482,55236,58345,62302,75065,75704,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	102120382	102155280	chr12:102120382-102155280	0	+	102120382	102120382	8553170	5	109,156,234,108,454,	0,3503,27847,33486,34444,
#Partially deleted in new
chr12	102123885	102152012	chr12:102123885-102152012	0	+	102123885	102123885	8553170	3	156,234,443,	0,24344,27684,
#Partially deleted in new
chr12	102123987	102197361	chr12:102123987-102197361	0	+	102123987	102196023	789624	6	54,234,108,171,155,1411,	0,24242,29881,40450,41741,71963,
#Partially deleted in new
chr12	102123987	102197361	chr12:102123987-102197361	0	+	102123987	102195959	789624	7	54,234,108,171,155,79,1411,	0,24242,29881,40450,41741,58561,71963,
#Partially deleted in new
chr12	102123987	102197361	chr12:102123987-102197361	0	+	102123987	102165748	789624	8	54,121,155,184,179,79,136,1411,	0,29881,41741,51495,54604,58561,71324,71963,
#Partially deleted in new
chr12	102123987	102197361	chr12:102123987-102197361	0	+	102123987	102123987	8553170	2	54,1411,	0,71963,
#Deleted in new
chr12	102196458	102197845	chr12:102196458-102197845	3	-	102196651	102197770	789624	3	243,199,324,	0,514,1063,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	102197584	102402596	chr12:102197584-102402596	3	+	102197584	102197584	8553170	1	205012,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	102217317	102217613	chr12:102217317-102217613	3	-	102217317	102217317	8553170	1	296,	0,
#Deleted in new
chr12	102230026	102230533	chr12:102230026-102230533	7	-	102230026	102230026	16724991	1	507,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	102395873	102480645	chr12:102395873-102480645	3	-	102402506	102480381	0	4	6693,182,157,327,	0,23635,79769,84445,
#Partially deleted in new
chr12	102402246	102415746	chr12:102402246-102415746	0	-	102402246	102402246	8553170	2	320,43,	0,13457,
#Partially deleted in new
chr12	102402327	102480638	chr12:102402327-102480638	1	-	102402540	102480381	0	6	239,49,182,157,82,52,	0,15627,17181,73315,77991,78259,
#Partially deleted in new
chr12	102402327	102481744	chr12:102402327-102481744	1	-	102402506	102480381	0	5	239,182,157,82,42,	0,17181,73315,77991,79375,
#Partially deleted in new
chr12	102402458	102478651	chr12:102402458-102478651	1	-	102402506	102478501	0	4	108,182,157,165,	0,17050,73184,76028,
#Partially deleted in new
chr12	102402516	102480610	chr12:102402516-102480610	1	-	102402540	102480381	0	5	50,49,182,157,292,	0,15438,16992,73126,77802,
#Partially deleted in new
chr12	102417490	102480563	chr12:102417490-102480563	1	-	102417817	102480381	0	4	513,182,157,245,	0,2018,58152,62828,
#Deleted in new
chr12	102513250	102513655	chr12:102513250-102513655	7	-	102513250	102513250	16724991	1	405,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	102809279	102824399	chr12:102809279-102824399	3	-	102809279	102809279	5263520	5	3337,105,120,56,104,	0,4588,11818,13428,15016,
#Partially deleted in new
chr12	102836884	102917603	chr12:102836884-102917603	3	-	102839174	102917130	0	13	2334,116,134,96,57,70,136,197,68,89,184,108,533,	0,3515,6761,7451,10010,14802,15930,18251,29711,40577,57850,75906,80186,
#Partially deleted in new
chr12	102838323	102917254	chr12:102838323-102917254	1	-	102839174	102913846	789624	14	895,116,134,96,57,70,136,197,68,89,184,108,132,184,	0,2076,5322,6012,8571,13363,14491,16812,28272,39138,56411,74467,75478,78747,
#Partially deleted in new
chr12	102839086	102852260	chr12:102839086-102852260	0	-	102839086	102839086	8553170	6	132,116,134,96,57,574,	0,1313,4559,5249,7808,12600,
#Partially deleted in new
chr12	102839088	102847378	chr12:102839088-102847378	0	-	102839088	102839088	8553170	5	130,116,134,96,484,	0,1311,4557,5247,7806,
#Partially deleted in new
chr12	102839208	102852817	chr12:102839208-102852817	0	-	102839208	102852817	789624	6	10,116,134,96,70,3,	0,1191,4437,5127,12478,13606,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	102840512	102853415	chr12:102840512-102853415	0	-	102840512	102840512	8553170	6	3,134,96,57,70,601,	0,3133,3823,6382,11174,12302,
#Partially deleted in new
chr12	102854685	102917226	chr12:102854685-102917226	0	-	102854685	102854685	8553170	6	647,68,89,184,108,156,	0,11910,22776,40049,58105,62385,
#Partially deleted in new
chr12	102855278	102917219	chr12:102855278-102917219	0	-	102855278	102855278	8553170	5	54,89,184,108,149,	0,22183,39456,57512,61792,
#Partially deleted in new
chr12	102877234	102917114	chr12:102877234-102917114	0	-	102877437	102917114	789624	4	316,184,108,44,	0,17500,35556,39836,
#Partially deleted in new
chr12	102877494	102958366	chr12:102877494-102958366	0	-	102877494	102917130	789624	5	56,184,108,155,172,	0,17240,35296,39576,80700,
#Partially deleted in new
chr12	102886044	102912880	chr12:102886044-102912880	0	-	102886044	102886044	8553170	3	198,184,90,	0,8690,26746,
#Partially deleted in new
chr12	102894734	102950846	chr12:102894734-102950846	0	-	102894734	102917130	789624	4	184,108,155,258,	0,18056,22336,55854,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	102894800	102915192	chr12:102894800-102915192	0	-	102894800	102894800	8553170	4	118,108,117,30,	0,17990,19652,20362,
#Partially deleted in new
chr12	102894865	102958222	chr12:102894865-102958222	0	-	102894865	102894865	8553170	3	53,108,28,	0,17925,63329,
#Partially deleted in new
chr12	102916572	102958410	chr12:102916572-102958410	0	-	102916572	102916572	8553170	3	26,155,216,	0,498,41622,
#Partially deleted in new
chr12	102917171	102950850	chr12:102917171-102950850	0	-	102917171	102917171	8553170	5	54,23,60,147,262,	0,6401,29571,32962,33417,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	102945958	102950845	chr12:102945958-102950845	0	-	102945958	102945958	8553170	4	80,221,147,257,	0,623,4175,4630,
#Deleted in new
chr12	102953288	102953835	chr12:102953288-102953835	3	-	102953288	102953288	8553170	1	547,	0,
#Deleted in new
chr12	102957685	102960516	chr12:102957685-102960516	3	+	102958244	102958955	789624	2	1317,1155,	0,1676,
#Partially deleted in new
chr12	103080949	103178675	chr12:103080949-103178675	3	-	103080949	103080949	8553170	3	588,70,97,	0,97179,97629,
#Partially deleted in new
chr12	103081089	103178401	chr12:103081089-103178401	0	-	103081089	103081089	8553170	3	448,70,70,	0,97039,97242,
#Partially deleted in new
chr12	103151841	103168234	chr12:103151841-103168234	3	+	103151841	103151841	789624	7	77,110,125,235,35,73,197,	0,4257,7617,10874,12561,12849,16196,
#Partially deleted in new
chr12	103151854	103161642	chr12:103151854-103161642	1	+	103151854	103151854	8553170	5	64,123,110,125,200,	0,3292,4244,7604,9588,
#Partially deleted in new
chr12	103162855	103168309	chr12:103162855-103168309	0	+	103162855	103162855	8553170	3	95,38,272,	0,1544,5182,
#Partially deleted in new
chr12	103162910	103168309	chr12:103162910-103168309	0	+	103162910	103162910	8553170	3	40,35,272,	0,1492,5127,
#Partially deleted in new
chr12	103237590	103495968	chr12:103237590-103495968	0	-	103273879	103478426	789624	11	312,46,75,1110,47,92,61,112,69,99,67,	0,25735,30043,30262,32216,36201,39559,131296,164016,240758,258311,
#Partially deleted in new
chr12	103262266	103267892	chr12:103262266-103267892	0	-	103262266	103262266	8553170	4	203,46,75,40,	0,1059,5367,5586,
#Partially deleted in new
chr12	103262269	103269853	chr12:103262269-103269853	0	-	103262269	103262269	8553170	5	200,46,34,105,47,	0,1056,5583,6588,7537,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	103263307	103267925	chr12:103263307-103267925	0	-	103263307	103263307	8553170	3	64,100,73,	0,4301,4545,
#Partially deleted in new
chr12	103267608	103441591	chr12:103267608-103441591	0	-	103267608	103267608	8553170	7	100,34,47,61,112,69,124,	0,244,2198,9541,101278,133998,173859,
#Partially deleted in new
chr12	103268541	103495958	chr12:103268541-103495958	0	-	103268541	103268541	8553170	7	421,47,61,112,69,99,57,	0,1265,8608,100345,133065,209807,227360,
#Partially deleted in new
chr12	103269819	103441595	chr12:103269819-103441595	0	-	103269819	103269819	8553170	6	34,160,61,112,69,128,	0,329,7330,99067,131787,171648,
#Partially deleted in new
chr12	103301942	103496010	chr12:103301942-103496010	3	-	103302107	103478426	789624	6	617,372,112,69,99,244,	0,4031,66944,99664,176406,193824,
#Partially deleted in new
chr12	103301942	103495968	chr12:103301942-103495968	1	-	103302107	103478426	789624	6	617,372,112,69,99,67,	0,4031,66944,99664,176406,193959,
#Partially deleted in new
chr12	103301954	103495966	chr12:103301954-103495966	1	-	103302107	103368944	789624	9	605,372,112,85,69,86,39,99,65,	0,4019,66932,76753,99652,129258,170017,176394,193947,
#Partially deleted in new
chr12	103301954	103495971	chr12:103301954-103495971	0	-	103368092	103478426	789624	7	605,372,95,112,69,99,205,	0,4019,66057,66932,99652,176394,193812,
#Partially deleted in new
chr12	103305973	103495946	chr12:103305973-103495946	0	-	103305973	103305973	8553170	7	372,95,112,69,144,99,45,	0,62038,62913,95633,171947,172375,189928,
#Partially deleted in new
chr12	103305981	103495953	chr12:103305981-103495953	0	-	103305981	103478426	789624	5	364,112,69,99,187,	0,62905,95625,172367,189785,
#Partially deleted in new
chr12	103349122	103495925	chr12:103349122-103495925	0	-	103349122	103349122	8553170	5	191,112,69,99,24,	0,19764,52484,129226,146779,
#Partially deleted in new
chr12	103476899	103495971	chr12:103476899-103495971	0	-	103476899	103476899	8553170	4	107,144,99,205,	0,1021,1449,18867,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	103503380	103504936	chr12:103503380-103504936	7	+	103503380	103503380	16724991	1	1556,	0,
#Deleted in new
chr12	103505410	103506174	chr12:103505410-103506174	7	-	103505410	103505410	16724991	2	204,191,	0,573,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	103547793	103559815	chr12:103547793-103559815	3	+	103547793	103547793	789624	5	132,313,100,110,2404,	0,874,1704,2668,9618,
#Partially deleted in new
chr12	103547825	103550661	chr12:103547825-103550661	0	+	103547825	103547825	8553170	4	100,313,100,200,	0,842,1672,2636,
#Partially deleted in new
chr12	103587272	103766727	chr12:103587272-103766727	3	+	103587476	103766336	789624	69	285,134,116,86,70,96,126,197,134,134,83,150,144,57,126,54,81,153,63,87,87,112,181,94,159,96,96,48,137,115,78,99,108,132,129,57,96,196,96,46,77,126,74,72,120,48,84,147,141,60,177,90,147,57,127,150,105,108,194,142,134,166,107,120,141,111,129,117,442,	0,3624,7122,33195,34769,44325,49838,50743,52850,61417,63223,65283,67282,67978,68183,73058,73410,75573,79018,81370,82268,83423,86634,88655,90180,95932,97716,100895,102573,103151,105539,108277,108464,111823,115875,117285,118359,119519,121168,124198,125094,126370,128542,130497,137702,138843,139994,141576,142843,144303,145733,148218,150361,152139,153357,155132,157900,159324,161690,163306,165947,168029,168339,170897,171860,174027,175001,176219,179013,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	103592111	103592243	chr12:103592111-103592243	3	+	103592111	103592111	8553170	1	132,	0,
#Partially deleted in new
chr12	103654779	103657995	chr12:103654779-103657995	3	-	103654779	103654779	8553170	2	89,389,	0,2827,
#Deleted in new
chr12	103668574	103669406	chr12:103668574-103669406	3	-	103668574	103668574	8553170	2	273,195,	0,637,
#Partially deleted in new
chr12	103703234	103705695	chr12:103703234-103705695	0	+	103703234	103704883	789624	4	42,57,147,64,	0,1323,1646,2397,
#Deleted in new
chr12	103711292	103712443	chr12:103711292-103712443	0	+	103711292	103711292	8553170	2	224,77,	0,1074,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	103746314	103766906	chr12:103746314-103766906	3	-	103746314	103746314	8553170	2	325,172,	0,20420,
#Partially deleted in new
chr12	103755091	103758287	chr12:103755091-103758287	0	+	103755091	103755091	8553170	3	376,107,310,	0,520,2886,
#Partially deleted in new
chr12	103757924	103761354	chr12:103757924-103761354	0	+	103757924	103757924	8553170	3	365,141,55,	0,1208,3375,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	103763311	103768858	chr12:103763311-103768858	1	-	103763311	103763311	8553170	3	507,179,52,	0,3423,5495,
#Partially deleted in new
chr12	103763497	103766416	chr12:103763497-103766416	0	+	103763497	103766325	789624	2	111,388,	0,2531,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	103770452	103785384	chr12:103770452-103785384	0	-	103777828	103785384	789624	5	877,142,1038,65,50,	0,5036,6591,9847,14882,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	103772309	103841197	chr12:103772309-103841197	3	-	103777828	103841156	789624	14	5772,65,141,87,82,102,103,61,138,91,56,75,185,249,	0,7990,13025,15131,16528,20854,21100,21627,24584,26277,34012,34545,42627,68639,
#Partially deleted in new
chr12	103777999	103793472	chr12:103777999-103793472	0	-	103785675	103793472	789624	8	82,65,141,177,87,82,102,63,	0,2300,7335,7571,9441,10838,15164,15410,
#Partially deleted in new
chr12	103787465	103789057	chr12:103787465-103789057	0	-	103787465	103787465	8553170	2	62,220,	0,1372,
#Partially deleted in new
chr12	103796892	103802401	chr12:103796892-103802401	0	-	103796892	103796892	8553170	3	139,91,322,	0,1694,5187,
#Partially deleted in new
chr12	103819609	103822085	chr12:103819609-103822085	3	+	103819609	103819609	8553170	3	119,72,222,	0,1189,2254,
#Partially deleted in new
chr12	103841450	103844664	chr12:103841450-103844664	3	+	103841450	103841450	8553170	2	184,490,	0,2724,
#Partially deleted in new
chr12	103843748	103882588	chr12:103843748-103882588	5	-	103843748	103843748	16724991	7	671,134,153,148,172,140,57,	0,13361,17369,18395,22631,26522,38783,
#Partially deleted in new
chr12	103843755	103915867	chr12:103843755-103915867	5	-	103843755	103843755	16724991	15	664,139,134,153,148,172,140,179,211,230,446,153,223,181,790,	0,755,13354,17362,18388,22624,26515,38776,39848,45645,49195,53215,62374,67562,71322,
#Partially deleted in new
chr12	103879731	103893169	chr12:103879731-103893169	4	-	103879731	103879731	16724991	6	83,48,76,240,140,215,	0,2931,6136,9669,11033,13223,
#Partially deleted in new
chr12	103889400	103893192	chr12:103889400-103893192	4	-	103889400	103889400	16724991	2	240,238,	0,3554,
#Partially deleted in new
chr12	103892993	103906272	chr12:103892993-103906272	4	-	103892993	103892993	16724991	3	403,161,135,	0,3977,13144,
#Partially deleted in new
chr12	103914961	103930131	chr12:103914961-103930131	4	-	103914961	103914961	16724991	2	1122,250,	0,14920,
#Deleted in new
chr12	103930106	103932929	chr12:103930106-103932929	0	+	103932376	103932929	789624	4	232,103,142,104,	0,1414,2170,2719,
#Partially deleted in new
chr12	103930333	103947926	chr12:103930333-103947926	3	+	103930515	103947662	0	18	231,103,142,117,332,112,120,117,138,78,66,270,246,137,79,156,120,294,	0,1187,1943,2492,3622,7361,8006,9175,11076,11295,11498,12193,12740,13404,16284,16452,16977,17299,
#Partially deleted in new
chr12	103930333	103938779	chr12:103930333-103938779	1	+	103930515	103938779	789624	8	231,103,142,117,332,112,83,7,	0,1187,1943,2492,3622,7361,8006,8439,
#Deleted in new
chr12	103930381	103932176	chr12:103930381-103932176	0	+	103930381	103930381	8553170	2	183,656,	0,1139,
#Partially deleted in new
chr12	103930409	103933990	chr12:103930409-103933990	0	+	103930515	103931720	789624	6	155,103,38,142,117,35,	0,1111,1301,1867,2416,3546,
#Deleted in new
chr12	103930424	103930555	chr12:103930424-103930555	3	+	103930424	103930424	5263520	1	131,	0,
#Partially deleted in new
chr12	103930437	103947927	chr12:103930437-103947927	0	+	103930437	103930437	8553170	17	127,103,142,117,332,112,120,117,138,78,66,793,137,79,156,120,295,	0,1083,1839,2388,3518,7257,7902,9071,10972,11191,11394,12089,13300,16180,16348,16873,17195,
#Partially deleted in new
chr12	103930437	103947901	chr12:103930437-103947901	1	+	103930515	103947387	789624	9	127,103,142,117,332,112,79,57,269,	0,1083,1839,2388,3518,7257,7902,16936,17195,
#Partially deleted in new
chr12	103938237	103941768	chr12:103938237-103941768	0	+	103938237	103938237	8553170	3	222,117,359,	0,1271,3172,
#Deleted in new
chr12	103941833	103943467	chr12:103941833-103943467	0	+	103941833	103941833	8553170	3	64,270,394,	0,693,1240,
#Partially deleted in new
chr12	103943618	103947400	chr12:103943618-103947400	0	+	103943618	103943618	8553170	4	256,79,156,90,	0,2999,3167,3692,
#Partially deleted in new
chr12	103943795	103953645	chr12:103943795-103953645	0	+	103943795	103953394	789624	5	79,79,156,120,260,	0,2822,2990,3515,9590,
#Partially deleted in new
chr12	103950201	103965695	chr12:103950201-103965695	0	-	103950201	103950201	8553170	3	1429,121,180,	0,3212,15314,
#Partially deleted in new
chr12	103950206	103957264	chr12:103950206-103957264	1	-	103951522	103956738	789624	3	1424,118,196,	0,6424,6862,
#Partially deleted in new
chr12	103950739	103957181	chr12:103950739-103957181	1	-	103953462	103956738	789624	4	891,121,118,113,	0,2674,5891,6329,
#Partially deleted in new
chr12	103950744	103957190	chr12:103950744-103957190	1	-	103951522	103956738	789624	2	886,560,	0,5886,
#Partially deleted in new
chr12	103951281	103965708	chr12:103951281-103965708	3	-	103951522	103956738	789624	3	349,118,193,	0,5349,14234,
#Partially deleted in new
chr12	103951409	103957134	chr12:103951409-103957134	0	-	103954914	103956738	789624	5	221,121,94,118,66,	0,2004,3465,5221,5659,
#Partially deleted in new
chr12	103951419	103957273	chr12:103951419-103957273	1	-	103951522	103956738	789624	3	211,118,134,	0,5211,5720,
#Partially deleted in new
chr12	103951479	103956738	chr12:103951479-103956738	0	-	103955765	103956738	789624	5	151,121,94,66,108,	0,1934,3395,4226,5151,
#Partially deleted in new
chr12	103951583	103957147	chr12:103951583-103957147	1	-	103953462	103956738	789624	3	47,121,517,	0,1830,5047,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	103954651	103957215	chr12:103954651-103957215	1	-	103954914	103956738	789624	3	317,118,147,	0,1979,2417,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	103956303	103957213	chr12:103956303-103957213	1	-	103956597	103956738	789624	2	445,145,	0,765,
#Partially deleted in new
chr12	103965803	103988874	chr12:103965803-103988874	3	+	103966037	103987090	0	10	257,143,242,70,136,83,95,172,126,1927,	0,11114,14027,15089,16995,17332,17491,18945,19799,21144,
#Partially deleted in new
chr12	103965841	103980473	chr12:103965841-103980473	0	+	103965841	103965841	8553170	2	219,643,	0,13989,
#Partially deleted in new
chr12	103965844	103987192	chr12:103965844-103987192	1	+	103973022	103987090	789624	11	216,74,143,242,70,136,83,95,172,126,245,	0,7115,11073,13986,15048,16954,17291,17450,18904,19758,21103,
#Partially deleted in new
chr12	103965844	103987194	chr12:103965844-103987194	1	+	103980913	103987090	789624	9	216,242,70,136,83,95,172,126,247,	0,13986,15048,16954,17291,17450,18904,19758,21103,
#Partially deleted in new
chr12	103965885	103983389	chr12:103965885-103983389	0	+	103966037	103983389	789624	7	175,143,242,70,115,83,95,	0,11032,13945,15007,16934,17250,17409,
#Partially deleted in new
chr12	103965902	103980668	chr12:103965902-103980668	0	+	103965902	103965902	8553170	3	158,143,838,	0,11015,13928,
#Partially deleted in new
chr12	103979864	103987057	chr12:103979864-103987057	0	+	103979864	103979864	8553170	6	208,70,591,172,126,110,	0,1028,2934,4884,5738,7083,
#Partially deleted in new
chr12	103979954	103987244	chr12:103979954-103987244	0	+	103979954	103983304	789624	7	118,70,136,95,172,126,297,	0,938,2844,3340,4794,5648,6993,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	103986233	103987025	chr12:103986233-103987025	0	+	103986233	103986233	8553170	2	232,433,	0,359,
#Partially deleted in new
chr12	103988983	104050137	chr12:103988983-104050137	1	-	103989407	104019648	789624	11	594,113,167,113,85,118,172,93,47,135,243,	0,4408,5351,7751,8467,10413,14151,26029,30646,32373,60911,
#Partially deleted in new
chr12	103988988	104029776	chr12:103988988-104029776	1	-	103989407	104019648	789624	10	589,113,167,113,85,118,172,93,47,81,	0,4403,5346,7746,8462,10408,14146,26024,30641,40707,
#Partially deleted in new
chr12	103989279	104064183	chr12:103989279-104064183	3	-	103989407	104019648	789624	11	298,113,167,113,85,118,172,93,47,394,235,	0,4112,5055,7455,8171,10117,13855,25733,30350,60615,74669,
#Partially deleted in new
chr12	103993863	103996846	chr12:103993863-103996846	0	-	103993863	103993863	8553170	2	638,112,	0,2871,
#Partially deleted in new
chr12	103999358	104050021	chr12:103999358-104050021	0	-	103999358	103999358	8553170	5	156,172,93,47,127,	0,3776,15654,20271,50536,
#Partially deleted in new
chr12	103999417	104050137	chr12:103999417-104050137	0	-	103999417	104003235	789624	4	97,172,70,243,	0,3717,50005,50477,
#Partially deleted in new
chr12	104030778	104031543	chr12:104030778-104031543	7	+	104030778	104030778	16724991	1	765,	0,
#Partially deleted in new
chr12	104064456	104106524	chr12:104064456-104106524	3	+	104064560	104103273	789624	15	267,149,161,209,85,107,189,168,53,178,204,74,138,186,3566,	0,1710,3490,14988,16289,18043,18256,22390,23529,28929,30903,31903,33886,37511,38502,
#Partially deleted in new
chr12	104064541	104103466	chr12:104064541-104103466	0	+	104064560	104093393	789624	14	182,149,161,209,85,107,189,168,178,204,74,138,186,508,	0,1625,3405,14903,16204,17958,18171,22305,28844,30818,31818,33801,37426,38417,
#Partially deleted in new
chr12	104064813	104079473	chr12:104064813-104079473	0	+	104066270	104079473	789624	4	407,149,161,29,	0,1353,3133,14631,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	104080432	104082756	chr12:104080432-104082756	0	+	104080432	104080432	8553170	3	398,107,44,	0,2067,2280,
#Partially deleted in new
chr12	104090922	104103301	chr12:104090922-104103301	0	+	104090922	104090922	8553170	8	19,178,204,74,81,138,186,343,	0,2463,4437,5437,6688,7420,11045,12036,
#Partially deleted in new
chr12	104098123	104103407	chr12:104098123-104103407	0	+	104098123	104098123	8553170	3	357,186,449,	0,3844,4835,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	104117076	104138289	chr12:104117076-104138289	3	-	104119736	104135453	0	8	2693,80,82,198,131,94,85,149,	0,3323,4163,6149,9037,11347,18371,21064,
#Partially deleted in new
chr12	104119354	104138017	chr12:104119354-104138017	1	-	104119736	104135453	0	8	415,80,82,198,131,94,85,642,	0,1045,1885,3871,6759,9069,16093,18021,
#Partially deleted in new
chr12	104121253	104128612	chr12:104121253-104128612	0	-	104121253	104121253	8553170	4	68,198,131,189,	0,1972,4860,7170,
#Partially deleted in new
chr12	104123263	104138203	chr12:104123263-104138203	0	-	104123263	104131762	789624	6	160,131,94,85,85,63,	0,2850,5160,8490,12184,14877,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	104125235	104125356	chr12:104125235-104125356	7	+	104125235	104125235	16724991	1	121,	0,
#Deleted in new
chr12	104131131	104138241	chr12:104131131-104138241	0	-	104131131	104131131	8553170	3	707,85,101,	0,4316,7009,
#Partially deleted in new
chr12	104170394	104177659	chr12:104170394-104177659	3	+	104170394	104170394	8553170	3	21,264,143,	0,1378,7122,
#Partially deleted in new
chr12	104215778	104350305	chr12:104215778-104350305	1	+	104215802	104348421	789624	18	115,152,61,110,123,73,120,143,116,226,93,77,157,108,96,135,60,1890,	0,35748,42240,73152,95511,97466,99998,103134,103691,105312,109558,110568,111736,115755,118458,123360,132574,132637,
#Partially deleted in new
chr12	104215778	104350283	chr12:104215778-104350283	1	+	104215802	104348421	0	17	115,152,61,110,123,73,120,143,116,226,93,77,157,108,96,135,1931,	0,35748,42240,73152,95511,97466,99998,103134,103691,105312,109558,110568,111736,115755,118458,123360,132574,
#Partially deleted in new
chr12	104224815	104258268	chr12:104224815-104258268	0	+	104224815	104224815	8553170	3	86,152,250,	0,26711,33203,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	104251545	104284406	chr12:104251545-104284406	0	+	104251545	104251545	8553170	5	133,61,82,95,131,	0,6473,25059,31336,32730,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	104262313	104280722	chr12:104262313-104280722	3	-	104262313	104262313	8553170	2	262,439,	0,17970,
#Deleted in new
chr12	104265308	104265836	chr12:104265308-104265836	7	+	104265308	104265308	16724991	1	528,	0,
#Partially deleted in new
chr12	104286001	104315826	chr12:104286001-104315826	0	+	104311325	104315826	789624	6	159,62,110,123,73,50,	0,1046,2929,25288,27243,29775,
#Partially deleted in new
chr12	104286681	104350305	chr12:104286681-104350305	3	+	104311325	104348421	789624	15	665,123,73,120,143,116,226,93,77,157,108,96,135,60,1890,	0,24608,26563,29095,32231,32788,34409,38655,39665,40833,44852,47555,52457,61671,61734,
#Partially deleted in new
chr12	104286681	104350305	chr12:104286681-104350305	1	+	104287427	104348421	789624	16	750,110,123,73,120,143,116,226,93,77,157,108,96,135,60,1890,	0,2249,24608,26563,29095,32231,32788,34409,38655,39665,40833,44852,47555,52457,61671,61734,
#Partially deleted in new
chr12	104286681	104350305	chr12:104286681-104350305	1	+	104313271	104348421	789624	15	428,110,73,120,143,116,226,93,77,157,108,96,135,60,1890,	0,2249,26563,29095,32231,32788,34409,38655,39665,40833,44852,47555,52457,61671,61734,
#Partially deleted in new
chr12	104286681	104350277	chr12:104286681-104350277	1	+	104311325	104348421	0	15	428,110,123,73,120,143,116,226,93,77,157,108,96,135,1925,	0,2249,24608,26563,29095,32231,32788,34409,38655,39665,40833,44852,47555,52457,61671,
#Partially deleted in new
chr12	104286880	104350283	chr12:104286880-104350283	1	+	104287336	104348421	0	15	466,110,123,73,120,143,116,226,93,77,157,108,96,135,1931,	0,2050,24409,26364,28896,32032,32589,34210,38456,39466,40634,44653,47356,52258,61472,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	104286924	104315901	chr12:104286924-104315901	0	+	104291008	104315901	789624	6	185,110,112,123,73,125,	0,2006,4068,24365,26320,28852,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr12	104286989	104350274	chr12:104286989-104350274	1	+	104291008	104348421	0	17	120,110,77,112,123,73,120,143,116,226,93,77,157,108,96,135,1922,	0,1941,2476,4003,24300,26255,28787,31923,32480,34101,38347,39357,40525,44544,47247,52149,61363,
#Partially deleted in new
chr12	104286994	104315832	chr12:104286994-104315832	0	+	104311325	104315832	789624	6	115,110,77,123,73,56,	0,1936,2471,24295,26250,28782,
#Partially deleted in new
chr12	104287021	104348828	chr12:104287021-104348828	1	+	104313271	104348421	0	14	88,110,73,120,143,116,226,93,77,157,108,96,135,476,	0,1909,26223,28755,31891,32448,34069,38315,39325,40493,44512,47215,52117,61331,
#Partially deleted in new
chr12	104287023	104327574	chr12:104287023-104327574	0	+	104326349	104327574	789624	4	327,93,77,60,	0,38313,39323,40491,
#Partially deleted in new
chr12	104287031	104289403	chr12:104287031-104289403	0	+	104287031	104287031	8553170	2	78,473,	0,1899,
#Partially deleted in new
chr12	104287048	104311406	chr12:104287048-104311406	0	+	104309928	104311406	789624	4	61,110,341,117,	0,1882,22710,24241,
#Partially deleted in new
chr12	104287056	104318943	chr12:104287056-104318943	0	+	104311325	104318943	789624	5	53,123,73,120,31,	0,24233,26188,28720,31856,
#Partially deleted in new
chr12	104287321	104313316	chr12:104287321-104313316	0	+	104311325	104313316	789624	5	110,110,192,123,72,	0,1609,22437,23968,25923,
#Partially deleted in new
chr12	104287367	104348644	chr12:104287367-104348644	1	+	104311325	104348421	0	15	64,110,123,73,120,143,116,226,93,77,157,108,96,135,292,	0,1563,23922,25877,28409,31545,32102,33723,37969,38979,40147,44166,46869,51771,60985,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	104288717	104350283	chr12:104288717-104350283	0	+	104311325	104346036	789624	15	323,123,73,120,143,116,226,93,77,157,108,96,135,137,1931,	0,22572,24527,27059,30195,30752,32373,36619,37629,38797,42816,45519,50421,57301,59635,
#Partially deleted in new
chr12	104288894	104319573	chr12:104288894-104319573	0	+	104311325	104319573	789624	7	146,77,123,73,120,143,104,	0,571,22395,24350,26882,30018,30575,
#Deleted in new
chr12	104303738	104305205	chr12:104303738-104305205	3	+	104303934	104304936	789624	1	1467,	0,
#Partially deleted in new
chr12	104309850	104348483	chr12:104309850-104348483	1	+	104309928	104348421	789624	14	249,123,73,120,143,116,226,93,77,157,108,96,135,131,	0,1439,3394,5926,9062,9619,11240,15486,16496,17664,21683,24386,29288,38502,
#Partially deleted in new
chr12	104334126	104348583	chr12:104334126-104348583	0	+	104334126	104334126	8553170	3	206,135,231,	0,5012,14226,
#Deleted in new
chr12	104455294	104456996	chr12:104455294-104456996	0	+	104455294	104455294	8553170	2	342,81,	0,1621,
#Partially deleted in new
chr12	104456967	104602279	chr12:104456967-104602279	1	+	104457411	104602021	789624	2	562,374,	0,144938,
#Partially deleted in new
chr12	104456970	104762014	chr12:104456970-104762014	1	+	104457411	104757803	789624	3	544,86,5066,	0,144935,299978,
#Partially deleted in new
chr12	104456972	104762014	chr12:104456972-104762014	3	+	104457411	104757803	789624	3	557,86,5066,	0,144933,299976,
#Partially deleted in new
chr12	104457000	104602147	chr12:104457000-104602147	1	+	104457411	104602021	789624	2	514,242,	0,144905,
#Partially deleted in new
chr12	104514028	104514439	chr12:104514028-104514439	7	+	104514028	104514028	16724991	1	411,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	104552072	104553447	chr12:104552072-104553447	3	+	104552072	104552072	8553170	1	1375,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	104588847	104757339	chr12:104588847-104757339	0	+	104601907	104757339	789624	3	96,86,391,	0,13058,168101,
#Deleted in new
chr12	104591632	104591716	chr12:104591632-104591716	3	+	104591632	104591632	5263520	1	84,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	104802552	104928655	chr12:104802552-104928655	3	-	104805151	104928527	789624	10	2785,149,132,80,148,147,145,72,108,683,	0,41919,43290,58738,63879,83740,86480,92721,107102,125420,
#Partially deleted in new
chr12	104804974	104834179	chr12:104804974-104834179	0	-	104804974	104804974	8553170	2	363,89,	0,29116,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	104851823	104851918	chr12:104851823-104851918	3	+	104851823	104851823	8553170	1	95,	0,
#Partially deleted in new
chr12	104889032	104928202	chr12:104889032-104928202	0	-	104889032	104928202	789624	3	145,72,230,	0,6241,38940,
#Partially deleted in new
chr12	104928096	104958293	chr12:104928096-104958293	0	-	104928096	104928527	789624	2	598,104,	0,30093,
#Partially deleted in new
chr12	104928161	104951528	chr12:104928161-104951528	0	-	104928161	104928527	789624	2	533,38,	0,23329,
#Partially deleted in new
chr12	104928243	104958744	chr12:104928243-104958744	0	-	104928243	104928527	789624	2	451,123,	0,30378,
#Partially deleted in new
chr12	104928299	104958319	chr12:104928299-104958319	0	-	104928299	104928527	789624	3	395,160,130,	0,3332,29890,
#Partially deleted in new
chr12	104928310	104958293	chr12:104928310-104958293	0	-	104928310	104928527	789624	2	384,206,	0,29777,
#Partially deleted in new
chr12	104928389	104958698	chr12:104928389-104958698	0	-	104928389	104928527	789624	3	305,160,98,	0,3242,30211,
#Partially deleted in new
chr12	104928491	104958288	chr12:104928491-104958288	0	-	104928491	104928527	789624	3	203,160,201,	0,3140,29596,
#Partially deleted in new
chr12	104976748	104978027	chr12:104976748-104978027	7	-	104976748	104976748	16724991	1	1279,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	104986309	105017624	chr12:104986309-105017624	3	+	104986352	104994696	789624	4	158,87,137,23147,	0,1857,5402,8168,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	104986337	105074197	chr12:104986337-105074197	0	+	104986352	104995996	789624	7	130,87,137,172,155,165,433,	0,1829,5374,8140,9534,86015,87427,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	104986337	105060827	chr12:104986337-105060827	1	+	104986352	104995996	789624	6	130,87,137,172,155,397,	0,1829,5374,8140,9534,74093,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	104986337	105048677	chr12:104986337-105048677	1	+	104986352	104995996	789624	6	130,87,137,172,155,1225,	0,1829,5374,8140,9534,61115,
#Partially deleted in new
chr12	104986338	104994720	chr12:104986338-104994720	1	+	104986352	104994479	789624	3	129,87,243,	0,1828,8139,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr12	105019783	105066605	chr12:105019783-105066605	0	-	105019783	105019783	8553170	19	4696,200,106,166,99,100,94,88,106,71,800,128,120,148,92,126,135,90,38,	0,6761,10540,11985,14516,18319,19929,20823,26926,27115,30124,32306,33028,38289,41197,41843,43104,45483,46784,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr12	105019789	105084577	chr12:105019789-105084577	3	-	105024423	105084436	789624	23	4690,200,106,166,99,100,94,88,106,71,151,128,120,148,92,126,135,90,102,166,235,145,189,	0,6755,10534,11979,14510,18313,19923,20817,26920,27109,30118,32300,33022,38283,41191,41837,43098,45477,46778,48929,50780,54071,64599,
#Partially deleted in new
chr12	105024423	105084458	chr12:105024423-105084458	0	-	105066647	105084436	789624	23	56,200,106,122,99,100,94,88,106,71,151,128,120,148,92,126,135,90,98,166,235,145,70,	0,2121,5900,7345,9876,13679,15289,16183,22286,22475,25484,27666,28388,33649,36557,37203,38464,40843,42144,44295,46146,49437,59965,
#Partially deleted in new
chr12	105030069	105031935	chr12:105030069-105031935	0	-	105030319	105031935	789624	2	360,167,	0,1699,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	105070519	105084444	chr12:105070519-105084444	0	-	105070519	105070519	8553170	3	285,145,56,	0,3341,13869,
#Partially deleted in new
chr12	105102471	105107179	chr12:105102471-105107179	3	-	105102471	105102471	789624	2	249,392,	0,4316,
#Partially deleted in new
chr12	105107323	105118516	chr12:105107323-105118516	0	+	105115674	105118516	789624	7	131,140,54,66,46,68,71,	0,3801,6892,7038,7860,8337,11122,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr12	105107713	105147905	chr12:105107713-105147905	0	+	105107713	105107713	8553170	25	148,140,54,66,46,68,83,43,104,121,124,128,161,127,126,108,147,80,106,117,169,155,75,105,296,	0,3411,6502,6648,7470,7947,10732,12841,13387,14404,18290,18521,19415,26056,30172,32580,33185,33453,34739,35413,36573,37004,38738,39328,39896,
#Partially deleted in new
chr12	105107713	105169134	chr12:105107713-105169134	3	+	105107800	105166931	789624	33	148,140,54,66,46,68,83,43,104,121,124,128,161,127,126,108,147,80,106,117,169,155,75,105,135,109,67,87,148,97,197,100,2271,	0,3411,6502,6648,7470,7947,10732,12841,13387,14404,18290,18521,19415,26056,30172,32580,33185,33453,34739,35413,36573,37004,38738,39328,41901,44629,49012,49522,52287,55035,56397,56927,59150,
#Partially deleted in new
chr12	105107714	105169130	chr12:105107714-105169130	0	+	105107800	105121097	789624	33	147,140,54,66,46,68,83,43,116,121,124,128,161,127,126,108,147,80,106,117,169,155,75,105,135,109,67,87,148,97,197,100,2267,	0,3410,6501,6647,7469,7946,10731,12840,13374,14403,18289,18520,19414,26055,30171,32579,33184,33452,34738,35412,36572,37003,38737,39327,41900,44628,49011,49521,52286,55034,56396,56926,59149,
#Partially deleted in new
chr12	105107771	105167000	chr12:105107771-105167000	1	+	105107800	105166931	789624	33	90,140,54,66,46,68,83,43,104,121,124,128,161,130,126,108,147,80,106,117,169,155,75,105,135,109,67,87,148,97,197,100,137,	0,3353,6444,6590,7412,7889,10674,12783,13329,14346,18232,18463,19357,25998,30114,32522,33127,33395,34681,35355,36515,36946,38680,39270,41843,44571,48954,49464,52229,54977,56339,56869,59092,
#Partially deleted in new
chr12	105107785	105126049	chr12:105107785-105126049	0	+	105115674	105121097	789624	10	76,54,66,46,68,83,43,116,121,46,	0,6430,6576,7398,7875,10660,12769,13303,14332,18218,
#Deleted in new
chr12	105144448	105146494	chr12:105144448-105146494	0	+	105144448	105144448	8553170	2	424,43,	0,2003,
#Partially deleted in new
chr12	105144717	105147543	chr12:105144717-105147543	0	+	105144717	105144717	8553170	3	155,75,502,	0,1734,2324,
#Partially deleted in new
chr12	105149473	105160094	chr12:105149473-105160094	0	+	105149473	105149473	8553170	5	276,109,67,87,94,	0,2869,7252,7762,10527,
#Partially deleted in new
chr12	105152345	105157322	chr12:105152345-105157322	0	+	105156733	105157322	789624	4	106,99,67,87,	0,2764,4380,4890,
#Partially deleted in new
chr12	105156506	105162802	chr12:105156506-105162802	0	+	105156733	105162802	789624	4	286,87,148,54,	0,729,3494,6242,
#Partially deleted in new
chr12	105156614	105162790	chr12:105156614-105162790	0	+	105156614	105156614	8553170	3	178,87,42,	0,621,6134,
#Partially deleted in new
chr12	105162748	105164729	chr12:105162748-105164729	0	+	105162748	105162748	8553170	3	97,197,57,	0,1362,1924,
#Partially deleted in new
chr12	105162790	105164633	chr12:105162790-105164633	0	+	105162790	105162790	8553170	2	55,523,	0,1320,
#Partially deleted in new
chr12	105173295	105236238	chr12:105173295-105236238	3	-	105174313	105236012	0	21	1153,48,141,37,175,53,165,89,57,43,189,159,83,147,59,42,88,72,60,99,280,	0,2739,3580,3930,14977,16476,16695,21965,22149,22289,24469,26077,30407,33765,34675,34862,37934,43773,44370,55829,62663,
#Partially deleted in new
chr12	105173296	105236203	chr12:105173296-105236203	0	-	105199520	105236012	789624	21	1152,48,141,37,175,53,165,89,57,43,189,152,83,147,59,42,88,72,60,99,245,	0,2738,3579,3929,14976,16475,16694,21964,22148,22288,24468,26076,30406,33764,34674,34861,37933,43772,44369,55828,62662,
#Partially deleted in new
chr12	105173934	105233450	chr12:105173934-105233450	1	-	105174313	105229148	0	21	514,48,141,37,175,53,165,89,57,43,189,159,83,147,59,42,88,72,60,99,360,	0,2100,2941,3291,14338,15837,16056,21326,21510,21650,23830,25438,29768,33126,34036,34223,37295,43134,43731,55190,59156,
#Partially deleted in new
chr12	105174016	105177455	chr12:105174016-105177455	0	-	105174016	105174016	8553170	4	432,48,141,230,	0,2018,2859,3209,
#Partially deleted in new
chr12	105174104	105176374	chr12:105174104-105176374	1	-	105174313	105176223	789624	2	344,340,	0,1930,
#Partially deleted in new
chr12	105174207	105236083	chr12:105174207-105236083	1	-	105174313	105236012	0	21	241,48,141,37,175,53,165,89,57,43,189,159,83,147,77,42,88,72,60,99,125,	0,1827,2668,3018,14065,15564,15783,21053,21237,21377,23557,25165,29495,32853,33763,33950,37022,42861,43458,54917,61751,
#Partially deleted in new
chr12	105174337	105190040	chr12:105174337-105190040	0	-	105174337	105190040	789624	7	111,48,141,37,124,53,50,	0,1697,2538,2888,13935,15434,15653,
#Partially deleted in new
chr12	105176802	105188449	chr12:105176802-105188449	0	-	105176802	105176802	8553170	3	214,37,177,	0,423,11470,
#Partially deleted in new
chr12	105177109	105233154	chr12:105177109-105233154	0	-	105177109	105177109	8553170	18	153,175,53,165,89,57,43,189,159,83,147,59,42,88,72,60,99,64,	0,11163,12662,12881,18151,18335,18475,20655,22263,26593,29951,30861,31048,34120,39959,40556,52015,55981,
#Partially deleted in new
chr12	105188374	105195276	chr12:105188374-105195276	0	-	105188374	105188374	8553170	4	73,118,165,16,	0,1397,1616,6886,
#Partially deleted in new
chr12	105197763	105208019	chr12:105197763-105208019	0	-	105197763	105197763	8553170	5	117,159,83,147,49,	0,1609,5939,9297,10207,
#Partially deleted in new
chr12	105199331	105211273	chr12:105199331-105211273	0	-	105207203	105211272	789624	6	200,83,147,31,42,44,	0,4371,7729,8639,8826,11898,
#Partially deleted in new
chr12	105203422	105207989	chr12:105203422-105207989	0	-	105203422	105203422	8553170	3	363,147,19,	0,3638,4548,
#Partially deleted in new
chr12	105206849	105217683	chr12:105206849-105217683	0	-	105206849	105206849	8553170	6	358,59,42,88,72,18,	0,1121,1308,4380,10219,10816,
#Partially deleted in new
chr12	105207149	105236093	chr12:105207149-105236093	0	-	105207149	105236012	789624	7	58,59,42,88,72,60,135,	0,821,1008,4080,9919,10516,28809,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	105211288	105229860	chr12:105211288-105229860	0	-	105211288	105229148	789624	5	29,72,60,99,233,	0,5780,6377,17836,18339,
#Partially deleted in new
chr12	105235289	105371180	chr12:105235289-105371180	0	+	105235289	105235289	8553170	7	67,94,25,36,80,38,547,	0,91680,113312,130517,131327,132182,135344,
#Partially deleted in new
chr12	105330635	105371518	chr12:105330635-105371518	3	+	105330891	105367476	789624	6	302,25,36,80,38,885,	0,17966,35171,35981,36836,39998,
#Partially deleted in new
chr12	105330635	105371517	chr12:105330635-105371517	1	+	105330891	105367476	789624	5	302,25,80,38,884,	0,17966,35981,36836,39998,
#Partially deleted in new
chr12	105330673	105370940	chr12:105330673-105370940	1	+	105330891	105367486	789624	4	264,80,38,307,	0,35943,36798,39960,
#Partially deleted in new
chr12	105330709	105396097	chr12:105330709-105396097	1	+	105330891	105395707	789624	3	228,25,466,	0,17892,64922,
#Partially deleted in new
chr12	105330852	105366464	chr12:105330852-105366464	0	+	105330852	105330852	8553170	3	85,25,658,	0,17749,34954,
#Partially deleted in new
chr12	105330867	105370680	chr12:105330867-105370680	0	+	105330891	105370680	789624	6	70,25,36,80,33,47,	0,17734,34939,35749,36609,39766,
#Partially deleted in new
chr12	105353508	105371203	chr12:105353508-105371203	0	+	105353508	105353508	8553170	5	78,36,80,38,570,	0,12298,13108,13963,17125,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	105704202	105744062	chr12:105704202-105744062	3	+	105704202	105704202	789624	3	54,142,2307,	0,33053,37553,
#Partially deleted in new
chr12	105706773	105742229	chr12:105706773-105742229	0	+	105706773	105706773	8553170	2	83,474,	0,34982,
#Deleted in new
chr12	106015896	106017006	chr12:106015896-106017006	7	+	106015896	106015896	16724991	1	1110,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	106050960	106058254	chr12:106050960-106058254	3	-	106050960	106050960	8553170	4	167,105,207,153,	0,316,1008,7141,
#Partially deleted in new
chr12	106063339	106140033	chr12:106063339-106140033	3	-	106066801	106138653	789624	7	4616,133,120,66,152,121,1620,	0,7434,9384,20524,23394,43065,75074,
#Partially deleted in new
chr12	106067578	106084033	chr12:106067578-106084033	0	-	106067578	106067932	789624	2	377,170,	0,16285,
#Partially deleted in new
chr12	106067814	106084038	chr12:106067814-106084038	0	-	106067814	106070855	789624	4	141,133,120,175,	0,2959,4909,16049,
#Partially deleted in new
chr12	106067937	106086956	chr12:106067937-106086956	0	-	106067937	106086853	789624	5	18,133,120,66,223,	0,2836,4786,15926,18796,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	106103162	106106165	chr12:106103162-106106165	3	+	106103162	106103162	8553170	3	216,138,399,	0,928,2604,
#Deleted in new
chr12	106170003	106172437	chr12:106170003-106172437	7	+	106170003	106170003	16724991	1	2434,	0,
#Partially deleted in new
chr12	106237876	106247988	chr12:106237876-106247988	3	-	106239023	106247851	789624	2	2473,620,	0,9492,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	106239893	106304251	chr12:106239893-106304251	0	-	106239893	106239893	8553170	3	456,135,240,	0,36521,64118,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	106240321	106304279	chr12:106240321-106304279	0	-	106240321	106254128	789624	4	28,142,135,268,	0,13756,36093,63690,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	106250758	106252786	chr12:106250758-106252786	3	+	106250758	106250758	8553170	1	2028,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	106282926	106282989	chr12:106282926-106282989	3	-	106282926	106282926	8553170	1	63,	0,
#Partially deleted in new
chr12	106301928	106311128	chr12:106301928-106311128	0	+	106311075	106311128	789624	2	65,88,	0,9112,
#Partially deleted in new
chr12	106302802	106347015	chr12:106302802-106347015	3	+	106311075	106346530	789624	10	139,192,136,121,221,137,188,182,173,730,	0,8238,11555,15541,18683,20707,32836,33229,38023,43483,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	106302802	106330171	chr12:106302802-106330171	1	+	106311075	106329358	789624	7	139,192,136,121,221,137,842,	0,8238,11555,15541,18683,20707,26527,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	106302817	106325913	chr12:106302817-106325913	1	+	106311075	106323693	789624	6	124,192,136,121,221,2404,	0,8223,11540,15526,18668,20692,
#Partially deleted in new
chr12	106302832	106323576	chr12:106302832-106323576	0	+	106311075	106323576	789624	7	109,139,192,136,121,221,67,	0,1260,8208,11525,15511,18653,20677,
#Partially deleted in new
chr12	106302852	106314468	chr12:106302852-106314468	0	+	106311075	106312318	789624	4	89,192,142,111,	0,8188,9440,11505,
#Partially deleted in new
chr12	106303059	106318445	chr12:106303059-106318445	0	+	106311075	106318445	789624	4	195,192,136,102,	0,7981,11298,15284,
#Partially deleted in new
chr12	106303492	106314493	chr12:106303492-106314493	0	+	106311075	106314493	789624	3	739,192,136,	0,7548,10865,
#Partially deleted in new
chr12	106303864	106311128	chr12:106303864-106311128	0	+	106311075	106311128	789624	3	367,89,88,	0,3417,7176,
#Partially deleted in new
chr12	106321573	106324056	chr12:106321573-106324056	0	+	106321573	106321573	8553170	3	133,137,119,	0,1936,2364,
#Partially deleted in new
chr12	106357657	106510198	chr12:106357657-106510198	3	+	106357879	106509549	789624	28	294,33,57,65,76,101,92,118,109,123,120,135,162,201,163,154,75,99,128,210,159,118,143,104,167,114,174,779,	0,6212,8858,9000,11617,11925,18701,20609,22373,35373,48199,53168,69539,72615,74660,76061,79399,80023,86805,96844,99480,101593,105820,138397,139094,143665,146423,151762,
#Partially deleted in new
chr12	106358081	106510196	chr12:106358081-106510196	1	+	106366669	106509549	789624	28	141,33,57,65,76,101,92,118,109,123,120,135,162,201,163,154,75,99,128,210,159,118,143,104,167,114,174,777,	0,5788,8434,8576,11193,11501,18277,20185,21949,34949,47775,52744,69115,72191,74236,75637,78975,79599,86381,96420,99056,101169,105396,137973,138670,143241,145999,151338,
#Partially deleted in new
chr12	106410243	106427267	chr12:106410243-106427267	0	+	106410243	106410243	8553170	3	376,135,71,	0,582,16953,
#Partially deleted in new
chr12	106495957	106774918	chr12:106495957-106774918	3	-	106495957	106495957	8553170	3	234,107,229,	0,4118,278732,
#Partially deleted in new
chr12	106496409	106774831	chr12:106496409-106774831	1	-	106496409	106496409	789624	4	137,107,183,142,	0,3666,11218,278280,
#Partially deleted in new
chr12	106582906	106762802	chr12:106582906-106762802	3	+	106583320	106761469	789624	18	457,87,61,124,62,214,78,164,101,59,145,95,118,120,162,163,139,1606,	0,25890,56425,71321,99086,103977,106380,113376,126423,128546,132493,137053,137852,149223,150017,164530,167748,178290,
#Partially deleted in new
chr12	106583644	106686932	chr12:106583644-106686932	0	+	106654285	106686932	789624	6	90,87,61,124,62,49,	0,25152,55687,70583,98348,103239,
#Partially deleted in new
chr12	106585726	106715544	chr12:106585726-106715544	0	+	106696315	106715544	789624	9	250,87,61,124,62,164,101,59,145,	0,23070,53605,68501,96266,110556,123603,125726,129673,
#Partially deleted in new
chr12	106601136	106761659	chr12:106601136-106761659	1	+	106601276	106761469	789624	18	210,87,61,124,62,214,78,164,101,59,145,95,118,120,162,163,139,463,	0,7660,38195,53091,80856,85747,88150,95146,108193,110316,114263,118823,119622,130993,131787,146300,149518,160060,
#Partially deleted in new
chr12	106601165	106715527	chr12:106601165-106715527	0	+	106601276	106696361	789624	11	181,87,61,124,62,214,78,133,101,59,128,	0,7631,38166,53062,80827,85718,88121,95148,108164,110287,114234,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	106601171	106733506	chr12:106601171-106733506	0	+	106601171	106601171	8553170	15	175,87,61,124,62,214,78,164,101,59,145,95,118,120,583,	0,7625,38160,53056,80821,85712,88115,95111,108158,110281,114228,118788,119587,130958,131752,
#Partially deleted in new
chr12	106639331	106683466	chr12:106639331-106683466	0	+	106639331	106639331	8553170	3	61,124,1474,	0,14896,42661,
#Partially deleted in new
chr12	106645881	106709430	chr12:106645881-106709430	0	+	106645910	106709430	789624	7	55,124,62,214,78,164,101,	0,8346,36111,41002,43405,50401,63448,
#Partially deleted in new
chr12	106680757	106684700	chr12:106680757-106684700	3	-	106680757	106680757	789624	4	400,179,243,41,	0,1233,2744,3902,
#Partially deleted in new
chr12	106684695	106762803	chr12:106684695-106762803	1	+	106684813	106761469	789624	14	213,214,78,164,101,59,145,95,118,120,162,163,139,1607,	0,2188,4591,11587,24634,26757,30704,35264,36063,47434,48228,62741,65959,76501,
#Partially deleted in new
chr12	106684695	106693159	chr12:106684695-106693159	0	+	106684695	106684695	8553170	4	213,214,78,94,	0,2188,4591,8370,
#Partially deleted in new
chr12	106684807	106709389	chr12:106684807-106709389	0	+	106684813	106686931	789624	5	101,191,78,164,60,	0,2099,4479,11475,24522,
#Partially deleted in new
chr12	106714923	106733066	chr12:106714923-106733066	3	-	106714923	106714923	8553170	2	649,160,	0,17983,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	106774594	106889316	chr12:106774594-106889316	3	+	106774745	106886015	789624	10	235,48,609,95,229,96,145,145,120,3413,	0,9402,40101,51131,67994,69257,76855,85673,96228,111309,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	106774620	106814870	chr12:106774620-106814870	0	+	106774745	106775365	789624	4	209,102,48,175,	0,703,9376,40075,
#Partially deleted in new
chr12	106774639	106886786	chr12:106774639-106886786	1	+	106774745	106886015	789624	9	190,48,609,95,229,96,145,145,883,	0,9357,40056,51086,67949,69212,76810,85628,111264,
#Partially deleted in new
chr12	106774662	106860316	chr12:106774662-106860316	0	+	106774662	106860316	789624	7	167,48,95,229,96,145,49,	0,9334,51063,67926,69189,76787,85605,
#Partially deleted in new
chr12	106774670	106887284	chr12:106774670-106887284	1	+	106798057	106874520	789624	12	159,48,93,609,95,229,96,145,145,120,87,1381,	0,9326,23306,40025,51055,67918,69181,76779,85597,96152,99810,111233,
#Partially deleted in new
chr12	106774681	106886181	chr12:106774681-106886181	1	+	106885922	106886015	789624	3	148,145,278,	0,85586,111222,
#Partially deleted in new
chr12	106774681	106814966	chr12:106774681-106814966	0	+	106774745	106814966	789624	2	148,271,	0,40014,
#Partially deleted in new
chr12	106774713	106887290	chr12:106774713-106887290	0	+	106774745	106874520	789624	13	116,48,609,95,229,96,145,145,120,87,139,173,1387,	0,9283,39982,51012,67875,69138,76736,85554,96109,99767,104273,105061,111190,
#Partially deleted in new
chr12	106774745	106871505	chr12:106774745-106871505	0	+	106774745	106774745	8553170	9	84,48,609,95,229,96,145,145,683,	0,9251,39950,50980,67843,69106,76704,85522,96077,
#Partially deleted in new
chr12	106774745	106874520	chr12:106774745-106874520	1	+	106774745	106874520	789624	10	84,48,609,95,229,96,145,145,120,40,	0,9251,39950,50980,67843,69106,76704,85522,96077,99735,
#Partially deleted in new
chr12	106822257	106887282	chr12:106822257-106887282	0	+	106823426	106868346	789624	12	1190,95,229,96,145,145,123,120,87,139,173,1379,	0,3468,20331,21594,29192,38010,46043,48565,52223,56729,57517,63646,
#Partially deleted in new
chr12	106870822	106886360	chr12:106870822-106886360	0	+	106870822	106873050	789624	3	120,143,457,	0,2209,15081,
#Partially deleted in new
chr12	106879727	106886250	chr12:106879727-106886250	0	+	106879727	106879727	8553170	2	220,347,	0,6176,
#Partially deleted in new
chr12	106901282	106901984	chr12:106901282-106901984	7	-	106901282	106901282	16724991	2	291,57,	0,645,
#Deleted in new
chr12	106910756	106911109	chr12:106910756-106911109	7	+	106910756	106910756	16724991	1	353,	0,
#Deleted in new
chr12	106954028	106955497	chr12:106954028-106955497	3	-	106954028	106954028	8553170	1	1469,	0,
#Partially deleted in new
chr12	106955718	106974036	chr12:106955718-106974036	3	+	106967116	106971391	789624	3	347,70,2932,	0,11392,15386,
#Partially deleted in new
chr12	106955721	106973984	chr12:106955721-106973984	1	+	106967116	106971391	789624	4	344,68,70,2880,	0,1360,11389,15383,
#Partially deleted in new
chr12	106956784	106971502	chr12:106956784-106971502	1	+	106967116	106971391	789624	3	365,70,398,	0,10326,14320,
#Partially deleted in new
chr12	106966934	106972341	chr12:106966934-106972341	1	+	106967116	106971391	789624	2	246,1237,	0,4170,
#Partially deleted in new
chr12	106971428	106978778	chr12:106971428-106978778	0	+	106971428	106971428	8553170	2	215,429,	0,6921,
#Partially deleted in new
chr12	106971470	106978757	chr12:106971470-106978757	0	+	106971470	106971470	8553170	4	173,104,110,408,	0,3480,4649,6879,
#Partially deleted in new
chr12	106977290	106987166	chr12:106977290-106987166	3	-	106977556	106978714	789624	3	1481,111,198,	0,7824,9678,
#Partially deleted in new
chr12	106977290	106987149	chr12:106977290-106987149	1	-	106977556	106978714	789624	3	1481,101,181,	0,7824,9678,
#Partially deleted in new
chr12	106977548	106987126	chr12:106977548-106987126	1	-	106977556	106978714	789624	2	1223,2012,	0,7566,
#Partially deleted in new
chr12	106978178	106987090	chr12:106978178-106987090	0	-	106978178	106978714	789624	2	593,122,	0,8790,
#Partially deleted in new
chr12	106978455	106985286	chr12:106978455-106985286	0	-	106978455	106978714	789624	3	316,93,172,	0,2165,6659,
#Partially deleted in new
chr12	106978614	106987122	chr12:106978614-106987122	0	-	106978614	106978714	789624	3	153,111,154,	0,6500,8354,
#Deleted in new
chr12	106985752	106987160	chr12:106985752-106987160	0	-	106985752	106985752	8553170	2	557,192,	0,1216,
#Partially deleted in new
chr12	106991363	107093829	chr12:106991363-107093829	3	-	106992786	107092961	789624	13	638,104,72,93,203,152,312,141,89,185,143,109,1026,	0,1423,1601,5930,6124,6551,8187,8578,9916,10400,13742,30720,101440,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	106991366	107050359	chr12:106991366-107050359	0	-	106991366	106991366	8553170	13	1670,113,203,152,312,141,89,185,143,109,229,82,406,	0,5927,6121,6548,8184,8575,9913,10397,13739,30717,51583,58404,58587,
#Partially deleted in new
chr12	106992486	106997539	chr12:106992486-106997539	0	-	106992786	106997539	789624	4	404,72,93,52,	0,478,4807,5001,
#Partially deleted in new
chr12	106999788	107001851	chr12:106999788-107001851	0	-	106999788	106999788	8553170	3	294,89,88,	0,1491,1975,
#Partially deleted in new
chr12	107072934	107093513	chr12:107072934-107093513	0	-	107072934	107072934	8553170	2	120,710,	0,19869,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	107271393	107271846	chr12:107271393-107271846	7	+	107271393	107271393	16724991	1	453,	0,
#Partially deleted in new
chr12	107318412	107659642	chr12:107318412-107659642	3	+	107318940	107657718	789624	17	1663,150,205,153,166,90,102,94,136,221,179,106,103,82,69,114,2134,	0,202074,225522,262739,291777,294367,296648,298676,298888,299745,301573,316872,321898,323677,330793,333261,339096,
#Partially deleted in new
chr12	107318420	107657718	chr12:107318420-107657718	1	+	107318940	107657718	789624	15	1655,150,205,153,166,90,102,94,179,106,103,82,69,114,210,	0,202066,225514,262731,291769,294359,296640,298668,301565,316864,321890,323669,330785,333253,339088,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	107318940	107650897	chr12:107318940-107650897	1	+	107318940	107649307	789624	15	1135,150,205,153,166,90,102,94,136,221,179,106,103,82,1692,	0,201546,224994,262211,291249,293839,296120,298148,298360,299217,301045,316344,321370,323149,330265,
#Partially deleted in new
chr12	107319897	107610320	chr12:107319897-107610320	0	+	107319897	107610320	789624	4	178,205,153,131,	0,224037,261254,290292,
#Partially deleted in new
chr12	107320587	107610356	chr12:107320587-107610356	0	+	107320598	107610356	789624	5	48,150,205,153,167,	0,199899,223347,260564,289602,
#Deleted in new
chr12	107374746	107374827	chr12:107374746-107374827	3	+	107374746	107374746	8553170	1	81,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	107486510	107486635	chr12:107486510-107486635	7	-	107486510	107486510	16724991	1	125,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	107580649	107659642	chr12:107580649-107659642	1	+	107580906	107657718	789624	15	358,153,166,90,102,94,136,221,179,106,103,82,69,114,2134,	0,502,29540,32130,34411,36439,36651,37508,39336,54635,59661,61440,68556,71024,76859,
#Partially deleted in new
chr12	107610033	107617721	chr12:107610033-107617721	3	-	107610033	107610033	8553170	2	376,131,	0,7557,
#Partially deleted in new
chr12	107634831	107657718	chr12:107634831-107657718	1	+	107640336	107657718	789624	7	127,106,103,82,69,114,210,	0,453,5479,7258,14374,16842,22677,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	107650788	107650892	chr12:107650788-107650892	3	+	107650788	107650788	8553170	1	104,	0,
#Partially deleted in new
chr12	107685731	107713167	chr12:107685731-107713167	3	+	107685899	107712220	789624	15	240,59,188,86,97,111,131,62,97,62,112,91,122,106,1057,	0,2716,2883,7082,7268,10742,11735,13641,17203,17953,18904,23194,23379,24673,26379,
#Partially deleted in new
chr12	107685801	107697578	chr12:107685801-107697578	0	+	107685899	107693010	789624	7	170,59,188,86,125,111,112,	0,2646,2813,7012,7170,10672,11665,
#Partially deleted in new
chr12	107685807	107693075	chr12:107685807-107693075	0	+	107688669	107693075	789624	5	164,55,188,86,76,	0,2644,2807,7006,7192,
#Partially deleted in new
chr12	107686041	107712412	chr12:107686041-107712412	1	+	107688669	107712220	789624	15	96,59,188,86,97,111,131,62,97,62,112,91,122,106,302,	0,2406,2573,6772,6958,10432,11425,13331,16893,17643,18594,22884,23069,24363,26069,
#Partially deleted in new
chr12	107692682	107697584	chr12:107692682-107697584	0	+	107692682	107692682	8553170	4	217,97,111,118,	0,317,3791,4784,
#Deleted in new
chr12	107719598	107720133	chr12:107719598-107720133	7	+	107719598	107719598	16724991	1	535,	0,
#Partially deleted in new
chr12	107732865	107761160	chr12:107732865-107761160	3	-	107734209	107760515	0	12	1657,169,315,128,86,119,150,795,186,134,267,204,	0,6517,8080,9355,10331,11677,13409,18549,21058,23966,27639,28091,
#Partially deleted in new
chr12	107734190	107761272	chr12:107734190-107761272	0	-	107746367	107760515	789624	12	332,169,315,128,86,119,150,563,186,134,267,142,	0,5192,6755,8030,9006,10352,12084,17456,19733,22641,26314,26940,
#Partially deleted in new
chr12	107736554	107738448	chr12:107736554-107738448	0	+	107736554	107736554	8553170	2	140,427,	0,1467,
#Deleted in new
chr12	107741065	107742593	chr12:107741065-107742593	0	-	107741065	107741065	8553170	2	195,373,	0,1155,
#Partially deleted in new
chr12	107742248	107751775	chr12:107742248-107751775	0	-	107742248	107751775	789624	5	100,86,140,150,361,	0,948,2294,4026,9166,
#Partially deleted in new
chr12	107754025	107761024	chr12:107754025-107761024	0	-	107754025	107754025	8553170	5	84,32,134,267,68,	0,803,2806,6479,6931,
#Partially deleted in new
chr12	107754027	107760928	chr12:107754027-107760928	0	-	107754027	107760515	789624	3	82,134,424,	0,2804,6477,
#Deleted in new
chr12	107774384	107776644	chr12:107774384-107776644	3	+	107775215	107775737	789624	1	2260,	0,
#Partially deleted in new
chr12	107832857	107835030	chr12:107832857-107835030	3	-	107832857	107832857	8553170	2	394,58,	0,2115,
#Deleted in new
chr12	107835540	107836555	chr12:107835540-107836555	3	-	107835540	107835540	8553170	1	1015,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	107839349	107864562	chr12:107839349-107864562	0	-	107839349	107839349	8553170	4	17,187,155,121,	0,6051,6613,25092,
#Deleted in new
chr12	107880580	107883386	chr12:107880580-107883386	7	+	107880580	107880580	16724991	3	143,291,575,	0,748,2231,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	107887729	107889886	chr12:107887729-107889886	7	+	107887729	107887729	16724991	2	257,431,	0,1726,
#Deleted in new
chr12	107899637	107899815	chr12:107899637-107899815	7	+	107899637	107899637	16724991	1	178,	0,
#Deleted in new
chr12	107903269	107903948	chr12:107903269-107903948	7	-	107903269	107903269	16724991	1	679,	0,
#Deleted in new
chr12	107910402	107912620	chr12:107910402-107912620	7	-	107910402	107910402	16724991	1	2218,	0,
#Deleted in new
chr12	107911324	107912297	chr12:107911324-107912297	5	-	107911324	107911324	16724991	1	973,	0,
#Partially deleted in new
chr12	108129470	108250119	chr12:108129470-108250119	3	+	108195832	108248343	789624	9	456,933,115,185,122,175,165,201,2129,	0,65811,76818,80650,95268,97519,103260,110873,118520,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	108129589	108195337	chr12:108129589-108195337	0	+	108129589	108129589	8553170	3	337,161,56,	0,42084,65692,
#Partially deleted in new
chr12	108129602	108195566	chr12:108129602-108195566	0	+	108129602	108129602	8553170	3	324,157,285,	0,37822,65679,
#Partially deleted in new
chr12	108129668	108195494	chr12:108129668-108195494	0	+	108129668	108129668	8553170	3	258,81,213,	0,20157,65613,
#Partially deleted in new
chr12	108129805	108227015	chr12:108129805-108227015	0	+	108206365	108227015	789624	5	121,115,185,122,26,	0,76483,80315,94933,97184,
#Partially deleted in new
chr12	108131730	108195686	chr12:108131730-108195686	0	+	108131730	108131730	8553170	2	130,405,	0,63551,
#Partially deleted in new
chr12	108131750	108250537	chr12:108131750-108250537	1	+	108195832	108248343	789624	10	110,157,933,115,185,122,175,165,201,2547,	0,35674,63531,74538,78370,92988,95239,100980,108593,116240,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	108131779	108195447	chr12:108131779-108195447	0	+	108131779	108131779	8553170	4	81,157,161,166,	0,35645,39894,63502,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	108131780	108195583	chr12:108131780-108195583	0	+	108131780	108131780	8553170	3	80,161,302,	0,39893,63501,
#Partially deleted in new
chr12	108189345	108195313	chr12:108189345-108195313	0	+	108189345	108189345	8553170	2	422,32,	0,5936,
#Partially deleted in new
chr12	108195832	108250119	chr12:108195832-108250119	1	+	108195832	108248343	789624	9	382,115,185,122,175,165,201,60,2129,	0,10456,14288,28906,31157,36898,44511,48689,52158,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	108196194	108197184	chr12:108196194-108197184	0	+	108196194	108196194	8553170	3	20,136,277,	0,105,713,
#Partially deleted in new
chr12	108226989	108233129	chr12:108226989-108233129	0	+	108226989	108226989	8553170	2	175,399,	0,5741,
#Deleted in new
chr12	108281102	108282235	chr12:108281102-108282235	7	-	108281102	108281102	16724991	1	1133,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	108288043	108339317	chr12:108288043-108339317	1	-	108291840	108293591	789624	3	4916,76,291,	0,5545,50983,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	108288043	108320662	chr12:108288043-108320662	1	-	108291840	108293591	789624	3	4916,76,118,	0,5545,32501,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	108291569	108339313	chr12:108291569-108339313	3	-	108291840	108292956	789624	3	1390,213,287,	0,38425,47457,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	108291670	108339341	chr12:108291670-108339341	1	-	108291840	108293591	789624	4	1289,76,213,315,	0,1918,38324,47356,
#Partially deleted in new
chr12	108292521	108320662	chr12:108292521-108320662	0	-	108292521	108293591	789624	3	438,76,118,	0,1067,28023,
#Partially deleted in new
chr12	108292532	108317917	chr12:108292532-108317917	0	-	108292532	108293591	789624	3	427,76,52,	0,1056,25333,
#Partially deleted in new
chr12	108459424	108473689	chr12:108459424-108473689	0	-	108459424	108459424	789624	4	160,65,185,139,	0,2205,13577,14126,
#Partially deleted in new
chr12	108515184	108521210	chr12:108515184-108521210	3	+	108516972	108519475	0	3	177,359,2811,	0,1730,3215,
#Deleted in new
chr12	108515299	108517455	chr12:108515299-108517455	1	+	108516972	108517392	789624	2	62,541,	0,1615,
#Partially deleted in new
chr12	108515315	108519530	chr12:108515315-108519530	1	+	108516972	108518361	789624	3	46,359,1411,	0,1599,2804,
#Partially deleted in new
chr12	108517120	108525832	chr12:108517120-108525832	0	+	108517120	108525605	789624	2	153,244,	0,8468,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr12	108522579	108561389	chr12:108522579-108561389	3	-	108523456	108561154	0	19	1055,191,153,455,169,77,113,110,59,78,108,139,156,125,52,185,105,127,547,	0,1736,2877,3519,7562,8624,9642,12779,13934,14128,14908,15485,16354,20448,21847,22559,25307,26508,38263,
#Partially deleted in new
chr12	108522707	108561161	chr12:108522707-108561161	0	-	108538159	108561154	0	19	927,191,153,455,169,77,113,110,59,78,108,139,145,125,52,185,105,127,319,	0,1608,2749,3391,7434,8496,9514,12651,13806,14000,14780,15357,16237,20320,21719,22431,25179,26380,38135,
#Partially deleted in new
chr12	108523411	108561159	chr12:108523411-108561159	1	-	108523456	108561154	0	18	223,191,153,455,169,77,113,110,59,78,139,156,125,52,185,105,127,317,	0,904,2045,2687,6730,7792,8810,11947,13102,13296,14653,15522,19616,21015,21727,24475,25676,37431,
#Deleted in new
chr12	108523868	108526185	chr12:108523868-108526185	0	-	108524311	108526185	789624	3	638,153,87,	0,1588,2230,
#Deleted in new
chr12	108524658	108525837	chr12:108524658-108525837	0	+	108524658	108524658	8553170	2	209,249,	0,930,
#Partially deleted in new
chr12	108526209	108561159	chr12:108526209-108561159	0	-	108526209	108561154	789624	16	344,169,77,113,110,59,78,108,139,156,125,106,185,105,127,317,	0,3932,4994,6012,9149,10304,10498,11278,11855,12724,16818,18217,18929,21677,22878,34633,
#Partially deleted in new
chr12	108530209	108561160	chr12:108530209-108561160	0	-	108542839	108561154	789624	16	101,77,113,110,59,78,108,139,156,82,125,52,185,105,127,318,	0,994,2012,5149,6304,6498,7278,7855,8724,12560,12818,14217,14929,17677,18878,30633,
#Partially deleted in new
chr12	108530209	108532617	chr12:108530209-108532617	0	-	108530209	108530209	8553170	3	101,77,396,	0,994,2012,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	108530222	108531968	chr12:108530222-108531968	0	-	108530222	108530222	8553170	3	88,77,605,	0,981,1141,
#Partially deleted in new
chr12	108531203	108535573	chr12:108531203-108535573	0	-	108531203	108531203	8553170	3	77,113,215,	0,1018,4155,
#Partially deleted in new
chr12	108531223	108537695	chr12:108531223-108537695	0	-	108531223	108531223	8553170	6	57,113,110,59,78,208,	0,998,4135,5290,5484,6264,
#Deleted in new
chr12	108537105	108538132	chr12:108537105-108538132	0	-	108537105	108537105	8553170	2	490,68,	0,959,
#Partially deleted in new
chr12	108543068	108549328	chr12:108543068-108549328	0	-	108543068	108549130	789624	6	84,52,185,105,127,29,	0,1358,2070,4818,6019,6231,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	108543111	108544944	chr12:108543111-108544944	0	-	108543111	108543111	8553170	2	41,518,	0,1315,
#Partially deleted in new
chr12	108545138	108554198	chr12:108545138-108554198	0	-	108545138	108549130	789624	4	185,105,127,131,	0,2748,3949,8929,
#Partially deleted in new
chr12	108545288	108561168	chr12:108545288-108561168	0	-	108545288	108545288	8553170	4	35,105,78,326,	0,2598,3848,15554,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	108560216	108561400	chr12:108560216-108561400	1	-	108560764	108561154	0	1	1184,	0,
#Deleted in new
chr12	108562581	108569341	chr12:108562581-108569341	0	+	108562581	108562581	8553170	4	1811,111,79,1684,	0,2739,4608,5076,
#Deleted in new
chr12	108562600	108569384	chr12:108562600-108569384	3	+	108562622	108568916	0	5	136,114,111,79,554,	0,1678,2720,4589,6230,
#Deleted in new
chr12	108562600	108569092	chr12:108562600-108569092	1	+	108562622	108567972	789624	6	136,114,111,79,97,262,	0,1678,2720,4589,5319,6230,
#Deleted in new
chr12	108562600	108568547	chr12:108562600-108568547	1	+	108562622	108567704	789624	5	136,114,111,79,890,	0,1678,2720,4589,5057,
#Deleted in new
chr12	108562600	108569099	chr12:108562600-108569099	1	+	108562622	108567704	789624	6	136,114,111,79,86,269,	0,1678,2720,4589,5057,6230,
#Deleted in new
chr12	108562600	108567566	chr12:108562600-108567566	0	+	108562600	108562600	8553170	4	136,114,111,377,	0,1678,2720,4589,
#Deleted in new
chr12	108562605	108569368	chr12:108562605-108569368	1	+	108564116	108568916	0	6	131,96,114,111,79,538,	0,1454,1673,2715,4584,6225,
#Deleted in new
chr12	108562605	108569368	chr12:108562605-108569368	0	+	108562622	108564086	789624	7	131,96,114,111,79,100,538,	0,1454,1673,2715,4584,5052,6225,
#Deleted in new
chr12	108562609	108567908	chr12:108562609-108567908	1	+	108562622	108567315	789624	4	127,114,111,719,	0,1669,2711,4580,
#Deleted in new
chr12	108562616	108567444	chr12:108562616-108567444	0	+	108562616	108562616	8553170	4	120,333,111,255,	0,1443,2704,4573,
#Deleted in new
chr12	108564998	108567299	chr12:108564998-108567299	0	+	108564998	108564998	8553170	2	433,110,	0,2191,
#Deleted in new
chr12	108567733	108569094	chr12:108567733-108569094	0	+	108567733	108567733	8553170	3	24,97,264,	0,186,1097,
#Deleted in new
chr12	108567857	108569094	chr12:108567857-108569094	0	+	108567857	108567857	8553170	2	159,264,	0,973,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	108589845	108598124	chr12:108589845-108598124	3	-	108591531	108592383	789624	2	2552,155,	0,8124,
#Partially deleted in new
chr12	108591962	108598320	chr12:108591962-108598320	0	-	108591962	108592383	789624	3	435,64,76,	0,6007,6282,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	108592251	108598008	chr12:108592251-108598008	0	-	108592251	108592383	789624	3	146,382,39,	0,1912,5718,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	108592299	108598148	chr12:108592299-108598148	0	-	108592299	108592383	789624	3	98,209,179,	0,2037,5670,
#Partially deleted in new
chr12	108622276	108633959	chr12:108622276-108633959	3	-	108623068	108624307	0	2	2036,220,	0,11463,
#Deleted in new
chr12	108622687	108624330	chr12:108622687-108624330	1	-	108623068	108624307	789624	2	1200,413,	0,1230,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	108622828	108632078	chr12:108622828-108632078	1	-	108623068	108631901	0	2	1484,220,	0,9030,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	108628686	108641318	chr12:108628686-108641318	3	+	108628686	108628686	8553170	3	63,92,445,	0,5644,12187,
#Deleted in new
chr12	108635809	108635870	chr12:108635809-108635870	3	+	108635809	108635809	5263520	1	61,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	108635848	108640917	chr12:108635848-108640917	1	+	108635848	108635848	8553170	3	198,61,44,	0,546,5025,
#Partially deleted in new
chr12	108645108	108731596	chr12:108645108-108731596	3	-	108647402	108701318	789624	11	2414,246,58,146,105,120,182,130,123,200,168,	0,3496,3854,7163,9197,12195,13629,16920,33163,56015,86320,
#Partially deleted in new
chr12	108645114	108702998	chr12:108645114-108702998	1	-	108647402	108702949	789624	11	2408,246,58,146,105,120,182,130,123,200,203,	0,3490,3848,7157,9191,12189,13623,16914,33157,56009,57681,
#Partially deleted in new
chr12	108646566	108730843	chr12:108646566-108730843	1	-	108647402	108701318	789624	11	956,246,58,146,105,120,182,130,123,200,221,	0,2038,2396,5705,7739,10737,12171,15462,31705,54557,84056,
#Partially deleted in new
chr12	108646568	108652345	chr12:108646568-108652345	0	-	108647402	108652345	789624	5	77,122,246,58,74,	0,832,2036,2394,5703,
#Partially deleted in new
chr12	108646988	108731518	chr12:108646988-108731518	0	-	108646988	108646988	8553170	5	534,246,4,17,90,	0,1616,1974,54318,84440,
#Partially deleted in new
chr12	108647379	108696402	chr12:108647379-108696402	1	-	108647402	108678274	789624	10	143,246,58,146,105,120,182,130,123,43,	0,1225,1583,4892,6926,9924,11358,14649,30892,48980,
#Partially deleted in new
chr12	108647383	108731526	chr12:108647383-108731526	0	-	108654378	108701318	789624	9	139,246,58,146,105,130,123,200,98,	0,1221,1579,4888,6922,14645,30888,53740,84045,
#Partially deleted in new
chr12	108647402	108703075	chr12:108647402-108703075	1	-	108647402	108702808	789624	11	120,246,58,146,105,120,182,130,123,200,280,	0,1202,1560,4869,6903,9901,11335,14626,30869,53721,55393,
#Deleted in new
chr12	108648686	108649671	chr12:108648686-108649671	0	-	108648686	108648686	8553170	2	164,709,	0,276,
#Partially deleted in new
chr12	108648962	108658832	chr12:108648962-108658832	0	-	108648962	108648962	8553170	6	58,146,23,105,120,95,	0,3309,4075,5343,8341,9775,
#Partially deleted in new
chr12	108652044	108658822	chr12:108652044-108658822	0	-	108652044	108652044	8553170	4	373,105,120,85,	0,2261,5259,6693,
#Partially deleted in new
chr12	108657361	108731518	chr12:108657361-108731518	0	-	108657361	108678274	789624	5	62,182,130,123,90,	0,1376,4667,20910,74067,
#Partially deleted in new
chr12	108658822	108701981	chr12:108658822-108701981	0	-	108658822	108701318	789624	5	97,130,123,200,16,	0,3206,19449,42301,43143,
#Partially deleted in new
chr12	108658858	108701356	chr12:108658858-108701356	0	-	108658858	108701318	789624	4	61,130,123,233,	0,3170,19413,42265,
#Partially deleted in new
chr12	108658877	108731153	chr12:108658877-108731153	0	-	108658877	108701318	789624	5	42,130,123,200,52,	0,3151,19394,42246,72224,
#Partially deleted in new
chr12	108658880	108730551	chr12:108658880-108730551	0	-	108658880	108701318	789624	5	39,130,123,200,407,	0,3148,19391,42243,71264,
#Partially deleted in new
chr12	108662022	108730669	chr12:108662022-108730669	0	-	108662022	108701318	789624	4	136,123,200,108,	0,16249,39101,68539,
#Partially deleted in new
chr12	108662113	108701924	chr12:108662113-108701924	0	-	108662113	108662113	8553170	4	45,123,200,436,	0,16158,39010,39375,
#Deleted in new
chr12	108668447	108668508	chr12:108668447-108668508	3	+	108668447	108668447	8553170	1	61,	0,
#Partially deleted in new
chr12	108700939	108731518	chr12:108700939-108731518	0	-	108700939	108700939	8553170	2	384,90,	0,30489,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	108738483	108738604	chr12:108738483-108738604	3	+	108738483	108738483	8553170	1	121,	0,
#Deleted in new
chr12	108778143	108778271	chr12:108778143-108778271	3	-	108778143	108778143	8553170	1	128,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	108778191	108857590	chr12:108778191-108857590	3	-	108787987	108857496	789624	15	11053,544,201,147,47,129,94,195,66,69,122,65,104,41,163,	0,14094,20808,22588,24130,26864,28109,29441,31501,33068,38846,40057,45066,74446,79236,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	108778911	108779166	chr12:108778911-108779166	3	+	108778911	108778911	8553170	1	255,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	108784796	108807690	chr12:108784796-108807690	0	-	108800920	108807690	789624	7	4448,544,201,147,129,94,58,	0,7489,14203,15983,20259,21504,22836,
#Partially deleted in new
chr12	108791918	108857590	chr12:108791918-108857590	1	-	108792099	108857496	789624	14	911,201,147,47,129,94,195,66,69,122,65,104,41,163,	0,7081,8861,10403,13137,14382,15714,17774,19341,25119,26330,31339,60719,65509,
#Partially deleted in new
chr12	108791925	108827551	chr12:108791925-108827551	1	-	108792099	108827405	789624	13	904,201,147,47,129,94,195,66,69,122,65,104,289,	0,7074,8854,10396,13130,14375,15707,17767,19334,25112,26323,31332,35337,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	108807611	108817380	chr12:108807611-108817380	0	-	108807611	108807611	8553170	3	216,66,343,	0,2081,9426,
#Partially deleted in new
chr12	108807674	108857513	chr12:108807674-108857513	0	-	108818309	108857496	789624	7	153,66,69,122,65,41,86,	0,2018,3585,9363,10574,44963,49753,
#Partially deleted in new
chr12	108807792	108811634	chr12:108807792-108811634	0	-	108807792	108807792	8553170	3	35,66,375,	0,1900,3467,
#Partially deleted in new
chr12	108809718	108826286	chr12:108809718-108826286	0	-	108809718	108826165	789624	6	40,69,122,65,104,183,	0,1541,7319,8530,13539,16385,
#Partially deleted in new
chr12	108811257	108826394	chr12:108811257-108826394	0	-	108811257	108811257	8553170	4	71,122,104,291,	0,5780,12000,14846,
#Deleted in new
chr12	108833720	108834384	chr12:108833720-108834384	3	-	108833720	108833720	8553170	1	664,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	108836907	108837006	chr12:108836907-108837006	3	-	108836907	108836907	5263520	1	99,	0,
#Partially deleted in new
chr12	108858931	108900921	chr12:108858931-108900921	1	+	108885006	108900535	789624	8	104,203,115,105,83,118,99,518,	0,26066,28518,35331,38074,39747,40445,41472,
#Partially deleted in new
chr12	108880029	108901043	chr12:108880029-108901043	3	+	108885006	108900535	0	11	195,203,115,77,66,55,105,83,118,99,640,	0,4968,7420,9439,10178,12952,14233,16976,18649,19347,20374,
#Partially deleted in new
chr12	108880090	108901039	chr12:108880090-108901039	0	+	108885006	108889511	789624	10	134,203,77,66,55,105,83,118,99,636,	0,4907,9378,10117,12891,14172,16915,18588,19286,20313,
#Partially deleted in new
chr12	108880108	108899432	chr12:108880108-108899432	0	+	108889528	108899432	789624	8	116,77,66,55,105,83,118,56,	0,9360,10099,12873,14154,16897,18570,19268,
#Partially deleted in new
chr12	108880139	108900931	chr12:108880139-108900931	0	+	108885006	108890270	789624	9	85,203,115,66,55,105,83,118,1555,	0,4858,7310,10068,12842,14123,16866,18539,19237,
#Partially deleted in new
chr12	108880350	108894345	chr12:108880350-108894345	0	+	108885006	108894345	789624	7	41,203,115,77,66,55,83,	0,4647,7099,9118,9857,12631,13912,
#Deleted in new
chr12	108898471	108900493	chr12:108898471-108900493	0	+	108898471	108898471	8553170	3	325,99,90,	0,905,1932,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	108907740	109021240	chr12:108907740-109021240	3	-	108912534	109020868	789624	16	5001,90,82,112,108,77,74,129,126,64,125,72,99,86,161,407,	0,8042,10302,11934,14949,26454,29523,31086,33043,37362,53182,64664,69657,70837,75860,113093,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	108926434	108926541	chr12:108926434-108926541	3	-	108926434	108926434	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	108936960	108938888	chr12:108936960-108938888	0	-	108936960	108936960	8553170	2	377,62,	0,1866,
#Partially deleted in new
chr12	108940826	109021023	chr12:108940826-109021023	0	-	108961000	109020868	789624	6	83,64,125,72,161,190,	0,4276,20096,31578,42774,80007,
#Partially deleted in new
chr12	108960934	109021040	chr12:108960934-109021040	0	-	108960934	109020868	789624	5	113,72,86,161,207,	0,11470,17643,22666,59899,
#Partially deleted in new
chr12	108978423	109021029	chr12:108978423-109021029	0	-	108978423	108978423	8553170	3	240,161,196,	0,5177,42410,
#Deleted in new
chr12	109020832	109021240	chr12:109020832-109021240	3	-	109020832	109020832	8553170	1	408,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	109023088	109086377	chr12:109023088-109086377	1	+	109056691	109085931	789624	16	79,270,92,125,110,183,104,99,46,95,60,87,81,220,121,711,	0,1714,4376,24501,33593,34837,44435,48523,49216,50349,58245,58844,59574,59754,61864,62578,
#Deleted in new
chr12	109052349	109053952	chr12:109052349-109053952	3	-	109052349	109052349	789624	2	389,267,	0,1336,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	109052585	109088026	chr12:109052585-109088026	3	+	109052678	109085931	0	13	176,110,183,104,99,46,95,60,87,81,220,121,2360,	0,4096,5340,14938,19026,19719,20852,28748,29347,30077,30257,32367,33081,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	109052590	109072350	chr12:109052590-109072350	0	+	109056691	109072350	789624	7	171,113,110,183,104,99,46,	0,2089,4091,5335,14933,19021,19714,
#Partially deleted in new
chr12	109052603	109082917	chr12:109052603-109082917	0	+	109052678	109067548	789624	9	158,104,99,46,95,60,87,81,75,	0,14920,19008,19701,20834,28730,29329,30059,30239,
#Partially deleted in new
chr12	109052641	109072347	chr12:109052641-109072347	0	+	109052678	109072347	789624	5	120,110,104,99,43,	0,4040,14882,18970,19663,
#Partially deleted in new
chr12	109052895	109058096	chr12:109052895-109058096	0	+	109054037	109058096	789624	4	83,170,110,171,	0,977,3786,5030,
#Deleted in new
chr12	109059985	109060100	chr12:109059985-109060100	7	+	109059985	109059985	16724991	1	115,	0,
#Partially deleted in new
chr12	109067593	109081628	chr12:109067593-109081628	0	+	109067593	109067593	8553170	5	34,99,46,95,295,	0,4018,4711,5844,13740,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	109082535	109088023	chr12:109082535-109088023	0	+	109082535	109082535	8553170	4	208,220,121,2357,	0,307,2417,3131,
#Partially deleted in new
chr12	109082694	109085922	chr12:109082694-109085922	0	+	109082694	109082694	8553170	3	368,121,256,	0,2258,2972,
#Deleted in new
chr12	109085062	109086324	chr12:109085062-109086324	0	+	109085062	109085931	789624	3	11,530,74,	0,604,1188,
#Partially deleted in new
chr12	109088187	109093488	chr12:109088187-109093488	1	-	109088318	109092786	0	3	325,431,139,	0,4319,5162,
#Partially deleted in new
chr12	109088188	109093472	chr12:109088188-109093472	3	-	109088205	109092786	0	4	324,199,281,226,	0,1820,4318,5058,
#Partially deleted in new
chr12	109088196	109093459	chr12:109088196-109093459	1	-	109088205	109092786	0	4	316,199,431,213,	0,1812,4310,5050,
#Partially deleted in new
chr12	109088221	109092789	chr12:109088221-109092789	1	-	109088318	109092786	0	2	291,283,	0,4285,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	109089619	109092752	chr12:109089619-109092752	0	-	109090004	109092752	789624	2	588,246,	0,2887,
#Partially deleted in new
chr12	109090036	109093469	chr12:109090036-109093469	0	-	109090036	109092786	789624	3	171,281,120,	0,2470,3313,
#Partially deleted in new
chr12	109090124	109093472	chr12:109090124-109093472	0	-	109090124	109092786	789624	2	83,966,	0,2382,
#Partially deleted in new
chr12	109092254	109093631	chr12:109092254-109093631	0	-	109092254	109092254	8553170	2	683,385,	0,992,
#Partially deleted in new
chr12	109097573	109110992	chr12:109097573-109110992	3	+	109097679	109109969	0	7	238,207,96,98,89,179,1164,	0,858,1615,4328,5265,5859,12255,
#Partially deleted in new
chr12	109097678	109099346	chr12:109097678-109099346	0	+	109097678	109097678	8553170	3	133,207,158,	0,753,1510,
#Partially deleted in new
chr12	109098117	109110975	chr12:109098117-109110975	1	+	109098326	109109969	0	6	521,96,98,89,179,1147,	0,1071,3784,4721,5315,11711,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	109098147	109110992	chr12:109098147-109110992	0	+	109098326	109105098	789624	7	491,96,98,89,179,120,1161,	0,1041,3754,4691,5285,6948,11684,
#Partially deleted in new
chr12	109098150	109110992	chr12:109098150-109110992	0	+	109098326	109102856	789624	5	488,96,89,179,1164,	0,1038,4688,5282,11678,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	109111217	109125594	chr12:109111217-109125594	3	+	109111217	109111217	8553170	3	255,321,334,	0,1877,14043,
#Boundary problem: need 53, got 0, diff 53, mapped 0.0
chr12	109116594	109268226	chr12:109116594-109268226	3	+	109139405	109266362	0	53	110,662,133,139,110,82,99,110,111,210,171,162,164,151,104,82,146,151,135,147,189,101,89,125,114,114,90,119,138,100,108,57,42,216,156,204,156,123,270,98,121,111,144,121,97,97,136,178,113,155,171,137,1991,	0,22802,50266,51301,55210,55680,57537,59336,59558,62493,63322,68984,71404,75018,75252,77053,80413,82807,84972,90115,92570,96241,100023,100201,105912,106204,107220,110776,116074,117153,117343,118718,119011,120570,123235,124483,125842,129031,129584,131011,133389,135451,136420,137619,139545,141673,142378,143885,145762,147637,148515,148794,149641,
#Partially deleted in new
chr12	109131357	109139910	chr12:109131357-109139910	0	+	109139480	109139910	789624	2	69,514,	0,8039,
#Boundary problem: need 52, got 0, diff 52, mapped 0.0
chr12	109139396	109268223	chr12:109139396-109268223	1	+	109139405	109266362	0	52	662,133,139,110,82,99,110,111,210,171,162,164,151,104,82,146,151,135,147,189,101,89,125,114,114,90,119,138,100,108,57,42,216,156,204,156,123,270,98,121,111,144,121,97,97,136,178,113,155,171,137,1988,	0,27464,28499,32408,32878,34735,36534,36756,39691,40520,46182,48602,52216,52450,54251,57611,60005,62170,67313,69768,73439,77221,77399,83110,83402,84418,87974,93272,94351,94541,95916,96209,97768,100433,101681,103040,106229,106782,108209,110587,112649,113618,114817,116743,118871,119576,121083,122960,124835,125713,125992,126839,
#Partially deleted in new
chr12	109139396	109260147	chr12:109139396-109260147	1	+	109232669	109260147	789624	47	662,133,139,110,82,99,110,111,210,171,162,164,151,104,82,146,151,135,147,189,101,89,125,114,114,90,119,138,100,108,57,42,216,156,204,156,123,270,98,121,111,144,121,97,97,136,83,	0,27464,28499,32408,32878,34735,36534,36756,39691,40520,46182,48602,52216,52450,54251,57611,60005,62170,67313,69768,73439,77221,77399,83110,83402,84418,87974,93272,94351,94541,95916,96209,97768,100433,101681,103040,106229,106782,108209,110587,112649,113618,114817,116743,118871,119576,120668,
#Partially deleted in new
chr12	109139978	109167280	chr12:109139978-109167280	0	+	109139978	109139978	8553170	2	80,420,	0,26882,
#Partially deleted in new
chr12	109154681	109172311	chr12:109154681-109172311	0	+	109154893	109172311	789624	5	259,133,139,110,37,	0,12179,13214,17123,17593,
#Partially deleted in new
chr12	109175976	109180040	chr12:109175976-109180040	0	+	109175976	109175976	8553170	4	64,111,284,124,	0,176,3111,3940,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	109191477	109191918	chr12:109191477-109191918	0	+	109191477	109191477	8553170	2	286,72,	0,369,
#Partially deleted in new
chr12	109232668	109266555	chr12:109232668-109266555	0	+	109232668	109260147	789624	26	138,100,108,57,42,216,156,204,156,123,270,98,121,111,144,121,97,97,136,85,178,113,155,171,137,320,	0,1079,1269,2644,2937,4496,7161,8409,9768,12957,13510,14937,17315,19377,20346,21545,23471,25599,26304,27396,27811,29688,31563,32441,32720,33567,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	109235306	109236377	chr12:109235306-109236377	0	+	109235306	109235306	8553170	2	63,772,	0,299,
#Partially deleted in new
chr12	109241222	109242667	chr12:109241222-109242667	0	+	109241222	109241222	8553170	2	59,231,	0,1214,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	109241669	109246386	chr12:109241669-109246386	0	+	109241669	109241669	8553170	3	923,123,208,	0,3956,4509,
#Partially deleted in new
chr12	109245713	109252578	chr12:109245713-109252578	0	+	109245713	109250016	789624	4	35,270,121,533,	0,465,4270,6332,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	109248957	109253061	chr12:109248957-109253061	0	+	109248957	109248957	8553170	3	1147,111,47,	0,3088,4057,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	109263021	109266941	chr12:109263021-109266941	0	+	109263021	109263021	8553170	4	1365,171,137,706,	0,2088,2367,3214,
#Partially deleted in new
chr12	109277978	109309220	chr12:109277978-109309220	1	-	109279670	109286800	789624	6	1952,393,208,214,89,102,	0,3428,7325,8669,30257,31140,
#Partially deleted in new
chr12	109277978	109286723	chr12:109277978-109286723	0	-	109279318	109286723	789624	3	1451,66,76,	0,7467,8669,
#Partially deleted in new
chr12	109277979	109309220	chr12:109277979-109309220	3	-	109279670	109308321	789624	10	1951,393,208,97,128,111,125,146,89,102,	0,3427,7324,8668,9417,9864,10076,12161,30256,31139,
#Partially deleted in new
chr12	109279760	109290252	chr12:109279760-109290252	0	-	109281798	109290252	789624	7	170,393,208,97,114,125,112,	0,1646,5543,6887,8083,8295,10380,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr12	109347902	109448371	chr12:109347902-109448371	1	+	109347960	109447182	789624	32	70,162,116,199,81,180,99,114,72,120,68,106,81,92,95,47,81,106,118,114,77,69,85,160,84,94,56,136,71,98,100,1213,	0,40780,45428,48481,49829,53190,56079,58019,58886,59891,61654,62060,62785,63991,67623,73078,76845,78043,79566,84994,87134,88585,90633,91728,92841,93712,94314,95611,96310,96529,97610,99256,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	109354082	109359488	chr12:109354082-109359488	3	-	109354082	109354082	789624	3	353,135,228,	0,3049,5178,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr12	109388718	109448371	chr12:109388718-109448371	3	+	109388718	109447182	789624	31	126,116,199,81,180,99,114,72,120,68,106,81,92,95,47,81,106,118,114,77,69,85,160,84,94,56,136,71,98,100,1213,	0,4612,7665,9013,12374,15263,17203,18070,19075,20838,21244,21969,23175,26807,32262,36029,37227,38750,44178,46318,47769,49817,50912,52025,52896,53498,54795,55494,55713,56794,58440,
#Partially deleted in new
chr12	109401404	109407881	chr12:109401404-109407881	0	+	109401404	109401404	8553170	5	80,99,114,72,88,	0,2577,4517,5384,6389,
#Partially deleted in new
chr12	109439536	109447455	chr12:109439536-109447455	0	+	109439536	109439536	8553170	9	254,84,94,56,136,71,98,100,297,	0,1207,2078,2680,3977,4676,4895,5976,7622,
#Partially deleted in new
chr12	109440566	109443670	chr12:109440566-109443670	0	+	109440566	109440566	8553170	4	261,94,56,157,	0,1048,1650,2947,
#Partially deleted in new
chr12	109443561	109455523	chr12:109443561-109455523	0	+	109443561	109447182	789624	6	88,71,98,100,122,56,	0,651,870,1951,3597,11906,
#Partially deleted in new
chr12	109445409	109447497	chr12:109445409-109447497	3	-	109445409	109445409	8553170	2	172,431,	0,1657,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	109448655	109477544	chr12:109448655-109477544	3	-	109451594	109477262	0	7	3158,196,53,87,170,214,285,	0,7462,8974,9336,11980,20859,28604,
#Partially deleted in new
chr12	109449960	109458985	chr12:109449960-109458985	1	-	109451594	109456297	789624	4	1853,196,53,994,	0,6157,7669,8031,
#Partially deleted in new
chr12	109449970	109477359	chr12:109449970-109477359	0	-	109458061	109477262	789624	6	1843,196,53,87,214,100,	0,6147,7659,8021,19544,27289,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	109449970	109459629	chr12:109449970-109459629	0	-	109449970	109449970	8553170	2	1843,3512,	0,6147,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	109451286	109477300	chr12:109451286-109477300	0	-	109471185	109477262	789624	7	527,196,53,90,170,1863,41,	0,4831,6343,6705,9349,18228,25973,
#Partially deleted in new
chr12	109451403	109464895	chr12:109451403-109464895	0	-	109451403	109451403	8553170	6	410,196,53,87,170,114,	0,4714,6226,6588,9232,13378,
#Partially deleted in new
chr12	109451594	109469724	chr12:109451594-109469724	1	-	109451594	109469722	789624	6	219,127,53,87,170,210,	0,4523,6035,6397,9041,17920,
#Partially deleted in new
chr12	109451629	109460395	chr12:109451629-109460395	0	-	109451629	109456297	789624	5	184,196,53,87,48,	0,4488,6000,6362,8718,
#Partially deleted in new
chr12	109451633	109458982	chr12:109451633-109458982	0	-	109451633	109456297	789624	5	180,196,53,87,58,	0,4484,5996,6358,7291,
#Partially deleted in new
chr12	109451640	109457975	chr12:109451640-109457975	0	-	109451640	109451640	8553170	3	173,196,346,	0,4477,5989,
#Partially deleted in new
chr12	109451681	109458871	chr12:109451681-109458871	0	-	109451681	109456297	789624	5	132,196,53,87,23,	0,4436,5948,6310,7167,
#Partially deleted in new
chr12	109456221	109477289	chr12:109456221-109477289	0	-	109460694	109477262	789624	5	92,53,193,170,30,	0,1408,1770,4414,21038,
#Partially deleted in new
chr12	109456242	109477305	chr12:109456242-109477305	0	-	109456242	109477262	789624	5	71,53,170,214,46,	0,1387,4393,13272,21017,
#Partially deleted in new
chr12	109456284	109477300	chr12:109456284-109477300	0	-	109456284	109477262	789624	6	29,53,57,170,214,41,	0,1345,1707,4351,13230,20975,
#Partially deleted in new
chr12	109460325	109477300	chr12:109460325-109477300	0	-	109460325	109460325	8553170	3	480,214,41,	0,9189,16934,
#Partially deleted in new
chr12	109469061	109477300	chr12:109469061-109477300	0	-	109469061	109469061	8553170	2	667,41,	0,8198,
#Partially deleted in new
chr12	109477401	109536705	chr12:109477401-109536705	3	+	109483551	109534782	789624	28	363,106,182,121,60,105,97,86,83,106,121,178,164,168,172,119,115,100,120,177,111,138,66,59,183,112,93,2115,	0,4235,6129,6459,8610,9069,11170,12517,13643,20416,20831,22231,23969,25621,30162,32194,32942,33802,39363,43746,44039,46576,47036,48956,52488,53145,56064,57189,
#Partially deleted in new
chr12	109477627	109484021	chr12:109477627-109484021	0	+	109477627	109477627	8553170	4	137,106,182,161,	0,4009,5903,6233,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	109477634	109490722	chr12:109477634-109490722	1	+	109483551	109490594	789624	9	130,106,182,121,60,105,97,86,233,	0,4002,5896,6226,8377,8836,10937,12284,12855,
#Partially deleted in new
chr12	109477637	109526404	chr12:109477637-109526404	0	+	109483551	109526404	789624	23	127,182,121,60,105,97,86,83,106,121,178,164,168,172,119,115,100,120,177,111,138,66,47,	0,5893,6223,8374,8833,10934,12281,13407,20180,20595,21995,23733,25385,29926,31958,32706,33566,39127,43510,43803,46340,46800,48720,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr12	109477641	109536702	chr12:109477641-109536702	1	+	109483551	109534782	789624	28	468,106,182,121,60,105,97,86,83,106,121,178,164,168,172,119,115,100,120,177,111,138,66,59,183,112,93,2112,	0,3995,5889,6219,8370,8829,10930,12277,13403,20176,20591,21991,23729,25381,29922,31954,32702,33562,39123,43506,43799,46336,46796,48716,52248,52905,55824,56949,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	109477651	109490722	chr12:109477651-109490722	1	+	109483551	109490594	789624	9	458,106,182,121,60,105,97,86,233,	0,3985,5879,6209,8360,8819,10920,12267,12838,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr12	109477652	109534654	chr12:109477652-109534654	0	+	109483551	109517967	789624	29	457,106,182,121,60,105,97,86,83,106,121,178,164,168,172,119,115,100,120,97,177,111,138,66,76,177,112,93,64,	0,3984,5878,6208,8359,8818,10919,12266,13392,20165,20580,21980,23718,25370,29911,31943,32691,33551,39112,40264,43495,43788,46325,46785,48705,52243,52894,55813,56938,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	109477652	109491149	chr12:109477652-109491149	1	+	109483551	109490594	789624	9	124,106,182,121,60,105,97,86,660,	0,3984,5878,6208,8359,8818,10919,12266,12837,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	109477654	109492737	chr12:109477654-109492737	1	+	109483551	109490118	789624	8	110,106,182,121,60,105,97,2819,	0,3982,5876,6206,8357,8816,10917,12264,
#Partially deleted in new
chr12	109501424	109511315	chr12:109501424-109511315	0	+	109501424	109501424	8553170	5	110,168,172,115,112,	0,1598,6139,8919,9779,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	109508449	109524095	chr12:109508449-109524095	0	+	109508449	109508449	8553170	7	1265,115,100,120,177,111,118,	0,1894,2754,8315,12698,12991,15528,
#Partially deleted in new
chr12	109519555	109535071	chr12:109519555-109535071	0	+	109519555	109519555	8553170	9	1769,111,138,66,59,183,112,93,1124,	0,1885,4422,4882,6802,10334,10991,13910,14392,
#Deleted in new
chr12	109529929	109534538	chr12:109529929-109534538	0	+	109529929	109533836	789624	4	143,112,93,882,	0,617,3536,3727,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	109553736	109573874	chr12:109553736-109573874	3	-	109557027	109573480	0	9	3400,60,65,98,73,58,94,62,528,	0,5359,7303,7683,8043,11382,15033,17912,19610,
#Partially deleted in new
chr12	109556696	109573497	chr12:109556696-109573497	1	-	109557027	109573480	789624	7	440,60,65,98,73,58,151,	0,2399,4343,4723,5083,8422,16650,
#Partially deleted in new
chr12	109556702	109573503	chr12:109556702-109573503	0	-	109561326	109573480	789624	10	434,60,65,87,98,73,58,94,62,157,	0,2393,4337,4540,4717,5077,8416,12067,14946,16644,
#Partially deleted in new
chr12	109556750	109573514	chr12:109556750-109573514	0	-	109568853	109573480	789624	9	386,60,65,87,98,73,58,94,168,	0,2345,4289,4492,4669,5029,8368,12019,16596,
#Partially deleted in new
chr12	109556753	109573480	chr12:109556753-109573480	0	-	109561326	109573480	789624	9	383,60,290,98,73,58,94,62,134,	0,2342,4286,4666,5026,8365,12016,14895,16593,
#Partially deleted in new
chr12	109561683	109573507	chr12:109561683-109573507	0	-	109561683	109561683	8553170	5	169,58,94,62,161,	0,3435,7086,9965,11663,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	109561779	109573497	chr12:109561779-109573497	0	-	109569996	109573480	789624	6	73,58,94,123,62,151,	0,3339,6990,8192,9869,11567,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	109561835	109573504	chr12:109561835-109573504	0	-	109567010	109573480	789624	6	17,58,157,94,62,158,	0,3283,5175,6934,9813,11511,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	109564819	109573483	chr12:109564819-109573483	0	-	109564819	109564819	8553170	4	357,94,62,137,	0,3950,6829,8527,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	109567817	109573580	chr12:109567817-109573580	1	-	109568765	109573480	789624	3	1046,62,234,	0,3831,5529,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	109567974	109568115	chr12:109567974-109568115	3	-	109567974	109567974	8553170	1	141,	0,
#Partially deleted in new
chr12	109573254	109581535	chr12:109573254-109581535	0	+	109574822	109581535	789624	5	317,83,148,145,141,	0,1563,2743,6547,8140,
#Partially deleted in new
chr12	109573301	109586096	chr12:109573301-109586096	0	+	109574822	109586096	789624	6	270,92,148,145,156,75,	0,1507,2696,6500,8093,12720,
#Partially deleted in new
chr12	109573340	109586098	chr12:109573340-109586098	0	+	109573340	109573340	8553170	4	231,92,148,77,	0,1468,2657,12681,
#Partially deleted in new
chr12	109573792	109597236	chr12:109573792-109597236	0	+	109574822	109586047	789624	9	81,92,148,104,46,91,117,154,811,	0,1016,2205,12229,12961,16978,17448,21235,22633,
#Partially deleted in new
chr12	109573804	109596677	chr12:109573804-109596677	1	+	109591315	109596577	789624	5	69,16,117,154,252,	0,17041,17436,21223,22621,
#Partially deleted in new
chr12	109573811	109597266	chr12:109573811-109597266	3	+	109574822	109596577	0	11	62,92,148,145,156,104,46,91,117,154,841,	0,997,2186,5990,7583,12210,12942,16959,17429,21216,22614,
#Partially deleted in new
chr12	109573831	109587069	chr12:109573831-109587069	0	+	109574822	109586047	789624	5	42,92,148,104,316,	0,977,2166,12190,12922,
#Partially deleted in new
chr12	109573836	109597261	chr12:109573836-109597261	1	+	109574822	109596577	789624	10	37,92,148,145,104,46,91,117,154,836,	0,972,2161,5965,12185,12917,16934,17404,21191,22589,
#Partially deleted in new
chr12	109574806	109598117	chr12:109574806-109598117	1	+	109574822	109596577	0	10	94,148,145,156,104,46,91,117,154,1692,	0,1191,4995,6588,11215,11947,15964,16434,20221,21619,
#Partially deleted in new
chr12	109574806	109598117	chr12:109574806-109598117	1	+	109574822	109596577	789624	9	94,148,145,104,46,91,117,154,1692,	0,1191,4995,11215,11947,15964,16434,20221,21619,
#Partially deleted in new
chr12	109574806	109597262	chr12:109574806-109597262	1	+	109574822	109586047	789624	8	94,148,104,46,91,117,154,837,	0,1191,11215,11947,15964,16434,20221,21619,
#Partially deleted in new
chr12	109574829	109597263	chr12:109574829-109597263	0	+	109574829	109596577	789624	9	71,148,156,104,46,91,117,154,838,	0,1168,6565,11192,11924,15941,16411,20198,21596,
#Partially deleted in new
chr12	109574836	109597270	chr12:109574836-109597270	0	+	109574836	109591299	789624	7	64,104,46,179,117,154,845,	0,11185,11917,15846,16404,20191,21589,
#Partially deleted in new
chr12	109581478	109587099	chr12:109581478-109587099	0	+	109581478	109581478	8553170	3	72,104,346,	0,4543,5275,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	109587860	109597262	chr12:109587860-109597262	0	+	109587860	109587860	8553170	4	3001,117,154,837,	0,3380,7167,8565,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	109662862	109663183	chr12:109662862-109663183	3	-	109662862	109662862	8553170	1	321,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	109714227	109770507	chr12:109714227-109770507	3	+	109744146	109769288	789624	3	670,128,2496,	0,29873,53784,
#Partially deleted in new
chr12	109714734	109722825	chr12:109714734-109722825	0	+	109714734	109714734	8553170	2	163,294,	0,7797,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	109734165	109773508	chr12:109734165-109773508	0	-	109734165	109734165	789624	3	428,231,212,	0,1425,39131,
#Partially deleted in new
chr12	109734322	109773484	chr12:109734322-109773484	3	-	109734322	109734322	789624	4	271,231,61,188,	0,1268,7782,38974,
#Deleted in new
chr12	109734411	109735957	chr12:109734411-109735957	0	-	109734411	109734411	8553170	2	182,367,	0,1179,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	109734766	109770494	chr12:109734766-109770494	1	+	109744146	109769288	789624	3	134,114,2483,	0,9348,33245,
#Partially deleted in new
chr12	109783084	109814891	chr12:109783084-109814891	1	-	109783620	109814796	0	15	694,122,128,317,67,166,74,93,159,180,299,141,153,173,481,	0,1231,3625,5315,9278,9567,10442,10845,11244,13440,15529,17533,19906,25211,31326,
#Partially deleted in new
chr12	109783086	109833401	chr12:109783086-109833401	3	-	109783620	109814796	0	16	692,122,128,317,67,166,74,93,159,180,299,141,153,173,417,52,	0,1229,3623,5313,9276,9565,10440,10843,11242,13438,15527,17531,19904,25209,31324,50263,
#Partially deleted in new
chr12	109783557	109833401	chr12:109783557-109833401	0	-	109793525	109814796	789624	16	221,122,128,317,67,166,116,93,159,180,299,141,153,173,417,52,	0,758,3152,4842,8805,9094,9927,10372,10771,12967,15056,17060,19433,24738,30853,49792,
#Partially deleted in new
chr12	109783620	109814796	chr12:109783620-109814796	1	-	109783620	109814796	0	16	158,122,128,317,67,166,74,93,159,180,299,141,153,173,205,79,	0,695,3089,4779,8742,9031,9906,10309,10708,12904,14993,16997,19370,24675,30790,31097,
#Partially deleted in new
chr12	109783620	109814796	chr12:109783620-109814796	1	-	109783620	109814796	0	14	158,122,128,317,67,166,74,93,159,299,141,153,173,386,	0,695,3089,4779,8742,9031,9906,10309,10708,14993,16997,19370,24675,30790,
#Partially deleted in new
chr12	109783620	109814796	chr12:109783620-109814796	1	-	109783620	109814796	0	14	158,122,128,317,67,166,74,93,159,180,299,153,173,386,	0,695,3089,4779,8742,9031,9906,10309,10708,12904,14993,19370,24675,30790,
#Partially deleted in new
chr12	109783620	109814796	chr12:109783620-109814796	1	-	109783620	109814796	0	13	158,122,128,317,67,166,74,93,159,299,153,173,386,	0,695,3089,4779,8742,9031,9906,10309,10708,14993,19370,24675,30790,
#Partially deleted in new
chr12	109814700	109832735	chr12:109814700-109832735	0	-	109814700	109814700	8553170	2	127,418,	0,17617,
#Deleted in new
chr12	109833347	109833436	chr12:109833347-109833436	3	+	109833347	109833347	5263520	1	89,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	109850942	109880488	chr12:109850942-109880488	3	-	109852554	109880374	0	5	1795,151,134,59,217,	0,4676,6583,7740,29329,
#Partially deleted in new
chr12	109852260	109880421	chr12:109852260-109880421	1	-	109852554	109880374	789624	5	477,151,77,59,150,	0,3358,5322,6422,28011,
#Partially deleted in new
chr12	109852544	109880325	chr12:109852544-109880325	0	-	109852554	109880325	789624	5	193,120,134,59,54,	0,3074,4981,6138,27727,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	109852554	109880374	chr12:109852554-109880374	1	-	109858151	109880374	789624	6	183,151,134,339,59,103,	0,3064,4971,5300,6128,27717,
#Partially deleted in new
chr12	109852664	109880383	chr12:109852664-109880383	0	-	109858151	109880374	789624	6	73,151,134,54,59,112,	0,2954,4861,5475,6018,27607,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	109855617	109880378	chr12:109855617-109880378	0	-	109858151	109880374	789624	5	152,134,339,59,107,	0,1908,2237,3065,24654,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	109859766	109860420	chr12:109859766-109860420	7	-	109859766	109859766	16724991	2	219,124,	0,530,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	109866213	109866509	chr12:109866213-109866509	3	-	109866213	109866213	8553170	1	296,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	109880675	109888467	chr12:109880675-109888467	3	+	109880675	109880675	8553170	2	53,675,	0,7117,
#Partially deleted in new
chr12	109900263	109905027	chr12:109900263-109905027	0	+	109900263	109900263	8553170	4	163,188,211,291,	0,2763,3673,4473,
#Partially deleted in new
chr12	109900273	109953269	chr12:109900273-109953269	0	+	109903026	109916623	789624	15	153,188,211,57,69,174,113,67,173,82,186,144,120,188,152,	0,2753,3663,4463,6298,7252,8312,8597,10789,12717,14168,15129,16317,32623,52844,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	109900279	109918069	chr12:109900279-109918069	3	+	109903026	109916623	789624	13	147,188,211,57,69,174,113,67,173,82,186,144,1479,	0,2747,3657,4457,6292,7246,8306,8591,10783,12711,14162,15123,16311,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	109900517	109918063	chr12:109900517-109918063	1	+	109903026	109916623	789624	13	214,188,211,57,69,174,113,67,173,82,186,144,1473,	0,2509,3419,4219,6054,7008,8068,8353,10545,12473,13924,14885,16073,
#Partially deleted in new
chr12	109900608	109906637	chr12:109900608-109906637	0	+	109903026	109906637	789624	5	451,188,211,57,66,	0,2418,3328,4128,5963,
#Partially deleted in new
chr12	109908814	109914528	chr12:109908814-109914528	0	+	109908814	109908814	8553170	4	123,173,82,87,	0,2248,4176,5627,
#Deleted in new
chr12	109912972	109916741	chr12:109912972-109916741	0	+	109912972	109912972	8553170	4	100,186,144,151,	0,1469,2430,3618,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	109914205	109918066	chr12:109914205-109918066	0	+	109914205	109914205	8553170	2	1341,1476,	0,2385,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr12	109929791	109996224	chr12:109929791-109996224	3	-	109932977	109996224	789624	20	3399,64,189,83,90,249,150,143,112,98,73,52,46,95,131,87,106,113,134,52,	0,4230,8588,9373,15468,17464,21375,23300,30055,31486,31821,35734,37666,51160,53581,53816,59171,59898,61835,66381,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr12	109929801	109996389	chr12:109929801-109996389	1	-	109932977	109996224	789624	19	3389,64,189,83,249,143,112,98,73,52,6,46,95,131,87,106,113,134,217,	0,4220,8578,9363,17454,23290,30045,31476,31811,35724,35958,37656,51150,53571,53806,59161,59888,61825,66371,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr12	109929803	109996304	chr12:109929803-109996304	1	-	109932977	109996224	789624	19	3387,64,189,83,249,150,143,112,98,73,52,46,95,131,87,106,113,134,132,	0,4218,8576,9361,17452,21363,23288,30043,31474,31809,35722,37654,51148,53569,53804,59159,59886,61823,66369,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr12	109929803	109996295	chr12:109929803-109996295	1	-	109932977	109996224	789624	19	3387,64,189,83,249,143,112,98,73,52,6,46,95,131,87,106,113,134,123,	0,4218,8576,9361,17452,23288,30043,31474,31809,35722,37510,37654,51148,53569,53804,59159,59886,61823,66369,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	109929844	109934151	chr12:109929844-109934151	0	+	109929844	109929844	8553170	2	2173,1255,	0,3052,
#Partially deleted in new
chr12	109932614	109996389	chr12:109932614-109996389	1	-	109932977	109996224	789624	18	576,64,189,83,105,143,112,98,73,52,46,95,131,87,106,113,134,217,	0,1407,5765,6550,18597,20477,27232,28663,28998,32911,34843,48337,50758,50993,56348,57075,59012,63558,
#Partially deleted in new
chr12	109932977	109996224	chr12:109932977-109996224	1	-	109932977	109996224	789624	19	213,64,189,83,90,249,143,112,98,73,49,46,95,131,87,106,113,134,52,	0,1044,5402,6187,12282,14278,20114,26869,28300,28635,32548,34480,47974,50395,50630,55985,56712,58649,63195,
#Partially deleted in new
chr12	109933037	109938977	chr12:109933037-109938977	0	-	109933037	109933037	8553170	3	153,64,598,	0,984,5342,
#Partially deleted in new
chr12	109933043	109983841	chr12:109933043-109983841	0	+	109933043	109933043	8553170	3	41,275,232,	0,47861,50566,
#Partially deleted in new
chr12	109933056	109996224	chr12:109933056-109996224	0	-	109933056	109989802	789624	18	134,64,189,83,249,150,143,112,98,73,52,46,95,131,87,106,113,52,	0,965,5323,6108,14199,18110,20035,26790,28221,28556,32469,34401,47895,50316,50551,55906,56633,63116,
#Partially deleted in new
chr12	109933095	109939022	chr12:109933095-109939022	0	-	109933095	109933095	8553170	4	95,64,189,214,	0,926,5284,5713,
#Partially deleted in new
chr12	109933111	109943021	chr12:109933111-109943021	0	-	109933111	109933111	8553170	5	79,64,189,83,180,	0,910,5268,6053,9730,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	109934036	109940501	chr12:109934036-109940501	0	-	109934036	109934036	8553170	4	49,189,75,748,	0,4343,5128,5717,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	109934039	109954550	chr12:109934039-109954550	0	-	109934039	109934039	8553170	6	46,189,83,1591,150,1459,	0,4340,5125,13216,17127,19052,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	109938534	109939685	chr12:109938534-109939685	0	-	109938534	109938534	8553170	2	34,521,	0,630,
#Partially deleted in new
chr12	109947321	109996296	chr12:109947321-109996296	1	-	109948822	109996224	789624	15	1525,150,143,112,98,73,52,46,95,131,87,106,113,134,124,	0,3845,5770,12525,13956,14291,18204,20136,33630,36051,36286,41641,42368,44305,48851,
#Partially deleted in new
chr12	109948061	109996291	chr12:109948061-109996291	1	-	109948822	109996224	789624	14	785,143,112,98,73,52,46,95,131,87,106,113,134,119,	0,5030,11785,13216,13551,17464,19396,32890,35311,35546,40901,41628,43565,48111,
#Deleted in new
chr12	109948388	109949029	chr12:109948388-109949029	3	+	109948388	109948388	8553170	1	641,	0,
#Partially deleted in new
chr12	109950693	109996373	chr12:109950693-109996373	0	-	109950693	109950693	8553170	14	623,143,112,98,73,52,46,95,131,87,106,113,134,201,	0,2398,9153,10584,10919,14832,16764,30258,32679,32914,38269,38996,40933,45479,
#Partially deleted in new
chr12	109952679	109959958	chr12:109952679-109959958	0	-	109952679	109952679	8553170	2	555,112,	0,7167,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	109961650	109983180	chr12:109961650-109983180	0	-	109961650	109961650	8553170	4	35,52,46,2229,	0,3875,5807,19301,
#Partially deleted in new
chr12	109980951	109996368	chr12:109980951-109996368	0	-	109980951	109980951	8553170	7	95,131,87,106,113,134,270,	0,2421,2656,8011,8738,10675,15147,
#Partially deleted in new
chr12	109983607	109992088	chr12:109983607-109992088	0	-	109983607	109983607	8553170	4	87,106,113,462,	0,5355,6082,8019,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	109997418	109999127	chr12:109997418-109999127	3	-	109997418	109997418	8553170	1	1709,	0,
#Partially deleted in new
chr12	109999185	110030700	chr12:109999185-110030700	0	+	110013159	110021159	789624	12	134,133,125,46,144,190,194,82,62,131,158,56,	0,12819,13939,17202,19159,19953,21922,26556,28519,29326,30292,31459,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	109999429	110022464	chr12:109999429-110022464	0	+	109999429	109999429	8553170	7	355,133,125,46,144,190,1357,	0,12575,13695,16958,18915,19709,21678,
#Partially deleted in new
chr12	109999522	110039763	chr12:109999522-110039763	3	+	109999688	110037554	789624	15	262,133,125,46,144,190,67,82,62,131,158,114,161,68,2405,	0,12482,13602,16865,18822,19616,24523,26219,28182,28989,29955,31122,34274,36738,37836,
#Partially deleted in new
chr12	110018383	110030756	chr12:110018383-110030756	0	+	110018383	110030756	789624	8	105,190,67,82,59,131,158,112,	0,755,5662,7358,9324,10128,11094,12261,
#Partially deleted in new
chr12	110023618	110029604	chr12:110023618-110029604	0	+	110023618	110023618	8553170	5	494,82,62,131,127,	0,2123,4086,4893,5859,
#Partially deleted in new
chr12	110027027	110048555	chr12:110027027-110048555	1	-	110028572	110048495	789624	2	1562,193,	0,21335,
#Partially deleted in new
chr12	110027898	110039428	chr12:110027898-110039428	0	+	110027898	110027898	8553170	6	744,158,114,161,68,2070,	0,1579,2746,5898,8362,9460,
#Partially deleted in new
chr12	110028557	110037673	chr12:110028557-110037673	0	+	110028557	110037554	789624	5	85,158,114,135,148,	0,920,2087,5239,8968,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	110028946	110036329	chr12:110028946-110036329	0	+	110028946	110028946	8553170	4	689,114,161,69,	0,1698,4850,7314,
#Partially deleted in new
chr12	110029550	110037652	chr12:110029550-110037652	0	+	110029550	110036313	789624	4	85,114,68,294,	0,1094,6710,7808,
#Deleted in new
chr12	110032244	110032803	chr12:110032244-110032803	3	+	110032244	110032244	8553170	1	559,	0,
#Partially deleted in new
chr12	110036214	110038006	chr12:110036214-110038006	0	+	110036214	110036214	8553170	2	114,648,	0,1144,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	110041159	110067695	chr12:110041159-110067695	1	-	110042350	110065874	789624	5	1300,108,176,174,206,	0,16029,17828,24700,26330,
#Partially deleted in new
chr12	110041178	110059178	chr12:110041178-110059178	1	-	110042350	110059178	789624	3	1281,108,191,	0,16010,17809,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	110041894	110049285	chr12:110041894-110049285	1	-	110042373	110048495	789624	3	565,508,229,	0,6468,7162,
#Partially deleted in new
chr12	110042110	110073634	chr12:110042110-110073634	0	-	110042110	110042110	8553170	2	349,213,	0,31311,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	110042280	110048565	chr12:110042280-110048565	1	-	110044435	110048495	789624	3	179,114,203,	0,2139,6082,
#Partially deleted in new
chr12	110042311	110048522	chr12:110042311-110048522	1	-	110042559	110048495	789624	2	301,160,	0,6051,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	110044116	110048552	chr12:110044116-110048552	1	-	110044435	110048495	789624	2	417,190,	0,4246,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	110049359	110073686	chr12:110049359-110073686	3	-	110050981	110073428	789624	2	1939,265,	0,24062,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	110056915	110057275	chr12:110056915-110057275	3	-	110056915	110056915	8553170	1	360,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	110124334	110169182	chr12:110124334-110169182	1	+	110127380	110167978	789624	12	527,165,104,181,90,66,111,85,164,96,147,1312,	0,3025,3711,4615,8212,10613,10992,12441,19047,22618,38584,43536,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr12	110124334	110218775	chr12:110124334-110218775	3	+	110127380	110218226	789624	19	109,165,104,181,90,66,111,85,164,96,147,150,129,90,87,72,86,46,732,	0,3025,3711,4615,8212,10613,10992,12441,19047,22618,38584,56087,66585,68282,79529,81108,81260,84836,93709,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr12	110124376	110218797	chr12:110124376-110218797	1	+	110127380	110218226	789624	19	485,165,104,181,90,66,111,85,164,96,147,150,129,90,87,72,86,46,754,	0,2983,3669,4573,8170,10571,10950,12399,19005,22576,38542,56045,66543,68240,79487,81066,81218,84794,93667,
#Partially deleted in new
chr12	110124391	110163065	chr12:110124391-110163065	0	+	110127380	110163065	789624	10	52,165,104,181,66,111,85,164,96,147,	0,2968,3654,4558,10556,10935,12384,18990,22561,38527,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr12	110127472	110218786	chr12:110127472-110218786	0	+	110127472	110216755	789624	20	52,104,181,90,66,111,85,164,96,147,150,129,90,87,72,86,46,69,126,743,	0,573,1477,5074,7475,7854,9303,15909,19480,35446,52949,63447,65144,76391,77970,78122,81698,89064,89235,90571,
#Partially deleted in new
chr12	110132592	110163065	chr12:110132592-110163065	0	+	110132592	110146960	789624	6	44,66,111,85,96,147,	0,2355,2734,4183,14360,30326,
#Partially deleted in new
chr12	110171894	110191061	chr12:110171894-110191061	0	+	110171894	110171894	8553170	3	192,150,142,	0,8527,19025,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	110203334	110218560	chr12:110203334-110218560	0	+	110203334	110203334	8553170	4	2180,86,46,517,	0,2260,5836,14709,
#Partially deleted in new
chr12	110280755	110296712	chr12:110280755-110296712	1	+	110292101	110296710	789624	5	209,18,83,105,114,	0,1848,1957,11264,15843,
#Partially deleted in new
chr12	110281115	110351090	chr12:110281115-110351090	1	+	110281789	110350305	789624	21	792,18,83,105,139,81,86,465,89,103,132,123,219,336,221,203,86,134,118,121,799,	0,1488,1597,10904,15483,41876,45274,46437,51481,52065,52896,58165,58387,59543,61112,62116,63770,64133,64885,65085,69176,
#Partially deleted in new
chr12	110281296	110351057	chr12:110281296-110351057	0	+	110281789	110282736	789624	20	622,83,105,139,81,86,465,89,103,132,123,219,336,221,203,86,134,118,1591,766,	0,1416,10723,15302,41695,45093,46256,51300,51884,52715,57984,58206,59362,60931,61935,63589,63952,64704,64904,68995,
#Partially deleted in new
chr12	110281680	110347326	chr12:110281680-110347326	3	+	110281789	110346470	789624	20	227,18,83,105,139,81,86,465,89,103,132,123,219,336,221,203,86,134,118,1126,	0,923,1032,10339,14918,41311,44709,45872,50916,51500,52331,57600,57822,58978,60547,61551,63205,63568,64320,64520,
#Partially deleted in new
chr12	110292048	110346621	chr12:110292048-110346621	0	+	110292048	110346470	789624	16	76,139,86,465,89,103,132,123,219,336,221,203,86,134,118,421,	0,4550,34341,35504,40548,41132,41963,47232,47454,48610,50179,51183,52837,53200,53952,54152,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	110295990	110323072	chr12:110295990-110323072	0	+	110295990	110295990	8553170	3	324,139,81,	0,608,27001,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	110325800	110332632	chr12:110325800-110332632	0	+	110325800	110325800	8553170	3	675,465,36,	0,1752,6796,
#Partially deleted in new
chr12	110327686	110332143	chr12:110327686-110332143	0	+	110327686	110327686	8553170	2	331,172,	0,4285,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	110329398	110334291	chr12:110329398-110334291	0	+	110329398	110329398	8553170	3	3287,103,280,	0,3782,4613,
#Deleted in new
chr12	110343255	110345247	chr12:110343255-110345247	0	+	110343255	110343255	8553170	2	179,362,	0,1630,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	110345436	110351093	chr12:110345436-110351093	0	+	110345436	110345436	8553170	2	682,4893,	0,764,
#Partially deleted in new
chr12	110346200	110350373	chr12:110346200-110350373	0	+	110346200	110347412	789624	3	121,61,82,	0,1192,4091,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	110360451	110360746	chr12:110360451-110360746	3	-	110360451	110360451	8553170	1	295,	0,
#Partially deleted in new
chr12	110372899	110403730	chr12:110372899-110403730	3	-	110374143	110403729	0	11	1434,151,225,197,118,143,154,112,120,187,204,	0,3166,4493,8852,9943,13427,14839,15612,22201,23366,30627,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	110373477	110379151	chr12:110373477-110379151	0	-	110373477	110373477	8553170	4	856,151,225,604,	0,2588,3915,5070,
#Partially deleted in new
chr12	110373681	110381858	chr12:110373681-110381858	0	-	110374143	110381858	789624	3	652,151,107,	0,2384,8070,
#Partially deleted in new
chr12	110374245	110377901	chr12:110374245-110377901	0	-	110374245	110374245	8553170	3	88,151,509,	0,1820,3147,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	110375466	110378097	chr12:110375466-110378097	0	-	110375466	110375466	8553170	2	750,705,	0,1926,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	110375476	110403730	chr12:110375476-110403730	1	-	110376061	110403729	0	10	740,225,197,118,143,154,112,120,187,204,	0,1916,6275,7366,10850,12262,13035,19624,20789,28050,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	110376131	110383265	chr12:110376131-110383265	0	-	110376131	110376131	8553170	4	85,225,197,423,	0,1261,5620,6711,
#Deleted in new
chr12	110377580	110378014	chr12:110377580-110378014	0	-	110377580	110377580	8553170	2	37,310,	0,124,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	110377590	110387277	chr12:110377590-110387277	0	-	110377590	110377590	8553170	4	27,197,118,951,	0,4161,5252,8736,
#Partially deleted in new
chr12	110386328	110396510	chr12:110386328-110396510	0	-	110386328	110386328	8553170	5	141,154,112,120,245,	0,1410,2183,8772,9937,
#Partially deleted in new
chr12	110386414	110403664	chr12:110386414-110403664	0	-	110395195	110403664	789624	5	55,154,112,120,138,	0,1324,2097,8686,17112,
#Partially deleted in new
chr12	110387462	110445548	chr12:110387462-110445548	3	-	110387462	110387462	8553170	5	430,112,120,187,97,	0,1049,7638,8803,57989,
#Partially deleted in new
chr12	110387628	110403689	chr12:110387628-110403689	0	-	110387628	110387628	8553170	4	264,120,187,163,	0,7472,8637,15898,
#Deleted in new
chr12	110429958	110430282	chr12:110429958-110430282	7	-	110429958	110429958	16724991	1	324,	0,
#Partially deleted in new
chr12	110434824	110450407	chr12:110434824-110450407	3	-	110435154	110450260	789624	7	393,95,127,69,77,100,153,	0,1285,1732,2259,5487,10627,15430,
#Partially deleted in new
chr12	110434909	110437299	chr12:110434909-110437299	0	-	110434909	110434909	8553170	3	308,574,216,	0,1200,2174,
#Partially deleted in new
chr12	110436177	110450311	chr12:110436177-110450311	0	-	110436177	110450260	789624	6	27,19,69,77,100,57,	0,487,906,4134,9274,14077,
#Partially deleted in new
chr12	110436586	110440507	chr12:110436586-110440507	0	-	110436586	110436586	8553170	3	97,69,196,	0,497,3725,
#Partially deleted in new
chr12	110436657	110445587	chr12:110436657-110445587	0	-	110436657	110445533	789624	4	26,69,77,136,	0,426,3654,8794,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	110436734	110450268	chr12:110436734-110450268	0	-	110436734	110436734	8553170	3	418,100,14,	0,8717,13520,
#Partially deleted in new
chr12	110442643	110450285	chr12:110442643-110450285	0	-	110442643	110442643	8553170	3	424,100,31,	0,2808,7611,
#Partially deleted in new
chr12	110444882	110450422	chr12:110444882-110450422	0	-	110444882	110444882	8553170	2	669,168,	0,5372,
#Deleted in new
chr12	110445068	110445485	chr12:110445068-110445485	0	-	110445068	110445068	8553170	2	175,34,	0,383,
#Partially deleted in new
chr12	110452483	110468266	chr12:110452483-110468266	3	-	110453033	110468203	789624	8	613,129,97,116,125,168,109,111,	0,1259,3102,3331,5026,7211,12622,15672,
#Partially deleted in new
chr12	110452486	110468721	chr12:110452486-110468721	1	-	110453033	110468636	789624	8	610,129,97,116,125,168,109,250,	0,1256,3099,3328,5023,7208,12619,15985,
#Partially deleted in new
chr12	110452488	110468264	chr12:110452488-110468264	1	-	110453033	110468203	789624	8	608,129,97,116,125,168,109,139,	0,1254,3097,3326,5021,7206,12617,15637,
#Partially deleted in new
chr12	110452563	110455930	chr12:110452563-110455930	0	-	110453033	110455930	789624	4	533,87,97,116,	0,1179,3022,3251,
#Partially deleted in new
chr12	110453811	110459862	chr12:110453811-110459862	0	-	110453811	110459862	789624	3	60,125,168,	0,3698,5883,
#Partially deleted in new
chr12	110455837	110468264	chr12:110455837-110468264	0	-	110455837	110465196	789624	5	93,125,168,109,69,	0,1672,3857,9268,12358,
#Partially deleted in new
chr12	110459819	110469214	chr12:110459819-110469214	0	-	110459819	110459819	8553170	4	43,109,130,358,	0,5286,8652,9037,
#Deleted in new
chr12	110460987	110461362	chr12:110460987-110461362	7	+	110460987	110460987	16724991	1	375,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	110464779	110468261	chr12:110464779-110468261	0	-	110464779	110464779	8553170	2	435,106,	0,3376,
#Partially deleted in new
chr12	110465185	110468719	chr12:110465185-110468719	0	-	110465185	110468203	789624	3	29,220,248,	0,2970,3286,
#Deleted in new
chr12	110468279	110469268	chr12:110468279-110469268	0	-	110468279	110468279	8553170	3	96,130,412,	0,192,577,
#Partially deleted in new
chr12	110468363	110490385	chr12:110468363-110490385	3	+	110468875	110490137	789624	7	655,41,122,130,184,83,367,	0,4714,16714,17961,18170,19497,21655,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	110468414	110487315	chr12:110468414-110487315	0	+	110468414	110468414	8553170	5	604,41,122,130,782,	0,4663,16663,17910,18119,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	110468423	110487298	chr12:110468423-110487298	0	+	110468423	110468423	8553170	5	102,41,122,130,765,	0,4654,16654,17901,18110,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	110468780	110487053	chr12:110468780-110487053	0	+	110468875	110486374	789624	4	238,41,130,520,	0,4297,17544,17753,
#Partially deleted in new
chr12	110486300	110490385	chr12:110486300-110490385	0	+	110486300	110486300	8553170	4	158,184,83,367,	0,233,1560,3718,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	110486890	110490349	chr12:110486890-110490349	0	+	110486890	110486890	8553170	2	1053,331,	0,3128,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	110491096	110502117	chr12:110491096-110502117	3	-	110492004	110502051	0	4	1026,236,192,69,	0,1899,4915,10952,
#Partially deleted in new
chr12	110491522	110502099	chr12:110491522-110502099	1	-	110492004	110502051	0	5	600,236,192,12,51,	0,1473,4489,8012,10526,
#Partially deleted in new
chr12	110491525	110501503	chr12:110491525-110501503	1	-	110492004	110501503	789624	5	597,236,192,12,87,	0,1470,4486,8009,9891,
#Partially deleted in new
chr12	110491623	110499546	chr12:110491623-110499546	1	-	110492004	110493141	789624	5	499,236,192,40,90,	0,1372,4388,7196,7833,
#Partially deleted in new
chr12	110491624	110502078	chr12:110491624-110502078	1	-	110492004	110493141	789624	5	498,236,192,40,30,	0,1371,4387,7195,10424,
#Partially deleted in new
chr12	110491690	110502092	chr12:110491690-110502092	1	-	110492004	110501503	789624	6	432,236,192,12,143,44,	0,1305,4321,7844,9726,10358,
#Partially deleted in new
chr12	110491730	110496217	chr12:110491730-110496217	0	-	110491730	110491730	8553170	2	392,206,	0,4281,
#Partially deleted in new
chr12	110491885	110502111	chr12:110491885-110502111	1	-	110492004	110493141	789624	5	237,236,192,90,63,	0,1110,4126,7571,10163,
#Partially deleted in new
chr12	110492920	110502108	chr12:110492920-110502108	0	-	110492920	110492920	8553170	3	311,192,60,	0,3091,9128,
#Partially deleted in new
chr12	110496045	110502107	chr12:110496045-110502107	0	-	110496045	110496045	8553170	5	158,180,40,12,59,	0,777,2774,3489,6003,
#Partially deleted in new
chr12	110496297	110502109	chr12:110496297-110502109	0	-	110496297	110496297	8553170	2	705,61,	0,5751,
#Partially deleted in new
chr12	110496351	110496421	chr12:110496351-110496421	3	-	110496351	110496351	8553170	1	70,	0,
#Partially deleted in new
chr12	110498795	110502107	chr12:110498795-110502107	0	-	110498795	110498795	8553170	2	751,59,	0,3253,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	110501613	110503441	chr12:110501613-110503441	3	+	110501613	110501613	8553170	1	1828,	0,
#Partially deleted in new
chr12	110501654	110518706	chr12:110501654-110518706	0	+	110501654	110501654	8553170	6	76,71,156,115,107,31,	0,2151,3962,4924,13395,17021,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	110502199	110532084	chr12:110502199-110532084	1	+	110505715	110530653	789624	11	155,71,156,115,100,107,107,65,123,235,1560,	0,1606,3417,4379,10579,12850,16476,16674,17594,19977,28325,
#Partially deleted in new
chr12	110502238	110532086	chr12:110502238-110532086	3	+	110502337	110531629	789624	12	145,71,156,115,100,107,107,65,123,235,109,513,	0,1567,3378,4340,10540,12811,16437,16635,17555,19938,28286,29335,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	110502290	110532084	chr12:110502290-110532084	1	+	110502337	110530653	789624	11	93,71,156,115,100,107,107,65,123,235,1560,	0,1515,3326,4288,10488,12759,16385,16583,17503,19886,28234,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	110502290	110532086	chr12:110502290-110532086	1	+	110505715	110530653	789624	11	86,71,156,115,100,107,107,65,123,235,1562,	0,1515,3326,4288,10488,12759,16385,16583,17503,19886,28234,
#Partially deleted in new
chr12	110502313	110532004	chr12:110502313-110532004	1	+	110502337	110531681	789624	9	70,71,156,115,107,65,123,235,431,	0,1492,3303,4265,16362,16560,17480,19863,29260,
#Partially deleted in new
chr12	110502327	110508141	chr12:110502327-110508141	0	+	110502327	110502327	8553170	5	56,71,156,115,65,	0,1478,3289,4251,5749,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	110502330	110532086	chr12:110502330-110532086	0	+	110505715	110511519	789624	12	46,71,156,115,156,100,107,107,65,123,235,1562,	0,1475,3286,4248,9097,10448,12719,16345,16543,17463,19846,28194,
#Partially deleted in new
chr12	110502342	110511494	chr12:110502342-110511494	0	+	110502342	110502342	8553170	5	97,71,156,115,67,	0,1463,3274,4236,9085,
#Partially deleted in new
chr12	110533244	110583320	chr12:110533244-110583320	3	-	110537036	110583031	789624	6	3851,130,124,199,180,512,	0,4899,6577,12635,18544,49564,
#Partially deleted in new
chr12	110536768	110546769	chr12:110536768-110546769	0	-	110536768	110536768	8553170	4	327,130,124,890,	0,1375,3053,9111,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	110614026	110630287	chr12:110614026-110630287	1	+	110614182	110629032	789624	4	376,121,131,1521,	0,5809,12335,14740,
#Partially deleted in new
chr12	110614026	110649430	chr12:110614026-110649430	1	+	110614182	110647892	789624	15	376,121,131,152,88,110,21,135,126,86,141,163,126,145,388,	0,5809,12335,14740,18445,20643,22454,26356,26997,27515,28222,30940,33184,33722,35016,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	110614026	110649128	chr12:110614026-110649128	1	+	110614182	110647892	789624	15	376,121,131,152,88,68,21,135,126,84,143,163,126,145,86,	0,5809,12335,14740,18445,20369,22454,26356,26997,27515,28220,30940,33184,33722,35016,
#Partially deleted in new
chr12	110614062	110628918	chr12:110614062-110628918	0	+	110614182	110626408	789624	3	340,131,122,	0,12299,14734,
#Partially deleted in new
chr12	110614101	110619923	chr12:110614101-110619923	0	+	110614182	110616728	789624	3	301,184,88,	0,2619,5734,
#Partially deleted in new
chr12	110614105	110649125	chr12:110614105-110649125	0	+	110614182	110628119	789624	16	297,121,131,173,152,88,110,21,135,126,86,141,163,126,145,83,	0,5730,12256,13946,14661,18366,20564,22375,26277,26918,27436,28143,30861,33105,33643,34937,
#Partially deleted in new
chr12	110614106	110649128	chr12:110614106-110649128	0	+	110614182	110619857	789624	15	357,121,131,152,88,110,21,135,126,86,141,163,126,145,86,	0,5729,12255,14660,18365,20563,22374,26276,26917,27435,28142,30860,33104,33642,34936,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	110614112	110649128	chr12:110614112-110649128	1	+	110614182	110647892	789624	15	290,121,131,152,88,68,21,135,126,86,141,163,126,145,86,	0,5723,12249,14654,18359,20283,22368,26270,26911,27429,28136,30854,33098,33636,34930,
#Partially deleted in new
chr12	110614112	110626382	chr12:110614112-110626382	0	+	110614182	110616848	789624	4	290,157,121,21,	0,2635,5723,12249,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	110614123	110629282	chr12:110614123-110629282	0	+	110614182	110626408	789624	3	279,131,516,	0,12238,14643,
#Partially deleted in new
chr12	110614125	110628118	chr12:110614125-110628118	1	+	110614182	110627946	789624	4	277,121,131,189,	0,5710,12236,13804,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	110614125	110630095	chr12:110614125-110630095	0	+	110614182	110619857	789624	4	338,121,131,1329,	0,5710,12236,14641,
#Partially deleted in new
chr12	110614138	110632587	chr12:110614138-110632587	0	+	110614138	110614138	8553170	4	264,73,122,116,	0,12223,14658,18333,
#Partially deleted in new
chr12	110614163	110649128	chr12:110614163-110649128	3	+	110614182	110647892	789624	15	239,121,131,152,88,110,21,135,126,86,141,163,141,145,86,	0,5672,12198,14603,18308,20506,22317,26219,26860,27378,28085,30803,33032,33585,34879,
#Partially deleted in new
chr12	110614164	110649126	chr12:110614164-110649126	0	+	110614182	110619857	789624	14	299,121,131,295,152,88,110,21,135,126,163,126,145,84,	0,5671,12197,13765,14602,18307,20505,22316,26218,26859,30802,33046,33584,34878,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	110614167	110649085	chr12:110614167-110649085	0	+	110614182	110634681	789624	16	235,121,131,152,88,68,110,21,135,126,86,141,163,126,145,43,	0,5668,12194,14599,18304,20228,20502,22313,26215,26856,27374,28081,30799,33043,33581,34875,
#Partially deleted in new
chr12	110619835	110640503	chr12:110619835-110640503	0	+	110619835	110619835	8553170	6	121,131,152,88,21,121,	0,6526,8931,12636,16645,20547,
#Partially deleted in new
chr12	110619835	110628826	chr12:110619835-110628826	0	+	110619835	110619835	8553170	3	121,131,30,	0,6526,8961,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	110625644	110625917	chr12:110625644-110625917	3	-	110625644	110625644	8553170	1	273,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	110627840	110689417	chr12:110627840-110689417	1	-	110628164	110683245	0	8	336,113,232,105,285,40,84,106,	0,22327,23376,27393,33323,55384,60784,61471,
#Partially deleted in new
chr12	110635666	110641586	chr12:110635666-110641586	0	+	110635666	110635666	8553170	4	835,135,126,45,	0,4716,5357,5875,
#Partially deleted in new
chr12	110636369	110647262	chr12:110636369-110647262	0	+	110636369	110636369	8553170	4	132,135,177,52,	0,4013,8597,10841,
#Partially deleted in new
chr12	110640445	110647757	chr12:110640445-110647757	0	+	110640445	110647260	789624	4	72,163,126,9,	0,4521,6765,7303,
#Partially deleted in new
chr12	110641048	110649128	chr12:110641048-110649128	0	+	110647761	110649128	789624	4	101,126,145,86,	0,6162,6700,7994,
#Partially deleted in new
chr12	110641951	110649130	chr12:110641951-110649130	0	+	110641951	110641951	8553170	5	438,163,126,145,88,	0,3015,5259,5797,7091,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	110643355	110649125	chr12:110643355-110649125	0	+	110643355	110643355	8553170	3	3981,145,83,	0,4393,5687,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	110644655	110647808	chr12:110644655-110647808	0	+	110644655	110644655	8553170	3	474,126,60,	0,2555,3093,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	110644707	110649126	chr12:110644707-110649126	0	+	110644707	110644707	8553170	3	422,126,84,	0,2503,4335,
#Partially deleted in new
chr12	110647292	110649126	chr12:110647292-110649126	0	+	110647292	110647292	8553170	2	601,84,	0,1750,
#Partially deleted in new
chr12	110648685	110683267	chr12:110648685-110683267	1	-	110649409	110683245	0	6	790,113,232,105,285,43,	0,1482,2531,6548,12478,34539,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	110648778	110689157	chr12:110648778-110689157	3	-	110649409	110683245	0	8	697,113,232,105,285,40,84,78,	0,1389,2438,6455,12385,34446,39846,40301,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	110648796	110688709	chr12:110648796-110688709	1	-	110649409	110683245	0	7	679,113,232,105,285,40,735,	0,1371,2420,6437,12367,34428,39178,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	110649132	110689778	chr12:110649132-110689778	1	-	110649409	110661409	0	7	343,113,232,105,285,84,53,	0,1035,2084,6101,12031,39492,40593,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	110651217	110689809	chr12:110651217-110689809	0	-	110651217	110683245	789624	6	231,105,285,40,84,84,	0,4016,9946,32007,37407,38508,
#Partially deleted in new
chr12	110651324	110683267	chr12:110651324-110683267	0	-	110655288	110683245	789624	4	124,105,169,43,	0,3909,9955,31900,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	110661234	110704950	chr12:110661234-110704950	0	-	110661234	110683245	789624	5	214,40,84,125,76,	0,21990,27390,41074,43640,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	110682654	110689819	chr12:110682654-110689819	0	-	110682654	110682654	8553170	3	610,84,94,	0,5970,7071,
#Partially deleted in new
chr12	110719679	110742898	chr12:110719679-110742898	3	-	110721075	110742707	0	7	1486,135,224,105,231,132,246,	0,2455,2792,4980,10849,12090,22973,
#Partially deleted in new
chr12	110719907	110742939	chr12:110719907-110742939	1	-	110720133	110742707	0	8	297,61,135,224,105,231,132,287,	0,1197,2227,2564,4752,10621,11862,22745,
#Partially deleted in new
chr12	110719982	110730755	chr12:110719982-110730755	0	-	110722637	110730755	789624	5	222,61,135,224,105,	0,1122,2152,2489,10668,
#Deleted in new
chr12	110720365	110722467	chr12:110720365-110722467	0	-	110720365	110720365	8553170	2	800,333,	0,1769,
#Partially deleted in new
chr12	110720729	110724714	chr12:110720729-110724714	0	-	110721040	110724714	789624	3	436,72,55,	0,1894,3930,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	110720747	110726679	chr12:110720747-110726679	0	-	110720747	110720747	8553170	4	418,135,224,2020,	0,1387,1724,3912,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	110720920	110732983	chr12:110720920-110732983	1	-	110721075	110731983	789624	6	245,135,224,105,231,1214,	0,1214,1551,3739,9608,10849,
#Partially deleted in new
chr12	110721300	110742873	chr12:110721300-110742873	1	-	110722101	110742707	789624	6	969,224,105,231,132,221,	0,1171,3359,9228,10469,21352,
#Partially deleted in new
chr12	110721769	110742839	chr12:110721769-110742839	1	-	110722405	110742707	789624	5	926,105,231,132,187,	0,2890,8759,10000,20883,
#Partially deleted in new
chr12	110730524	110742867	chr12:110730524-110742867	0	-	110730524	110742707	789624	3	235,132,215,	0,1245,12128,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	110731815	110742900	chr12:110731815-110742900	0	-	110731815	110731815	8553170	3	86,269,248,	0,2902,10837,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	110744548	110746206	chr12:110744548-110746206	3	+	110744548	110744548	8553170	1	1658,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	110831778	110845963	chr12:110831778-110845963	3	+	110831778	110831778	8553170	2	216,365,	0,13820,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	110841537	110842387	chr12:110841537-110842387	7	-	110841537	110841537	16724991	1	850,	0,
#Partially deleted in new
chr12	110846768	110881272	chr12:110846768-110881272	0	+	110846768	110846768	8553170	4	337,190,120,158,	0,11817,27073,34346,
#Partially deleted in new
chr12	110846959	110907535	chr12:110846959-110907535	3	+	110852954	110907476	789624	12	146,105,170,190,120,182,182,221,75,193,204,205,	0,5899,6445,11626,26882,32946,34155,37070,46116,51973,57628,60371,
#Partially deleted in new
chr12	110846959	110907534	chr12:110846959-110907534	1	+	110853515	110907476	789624	11	146,170,190,120,182,182,221,75,193,204,204,	0,6445,11626,26882,32946,34155,37070,46116,51973,57628,60371,
#Partially deleted in new
chr12	110847026	110907535	chr12:110847026-110907535	1	+	110858643	110907476	789624	10	79,190,120,182,182,221,75,193,204,205,	0,11559,26815,32879,34088,37003,46049,51906,57561,60304,
#Partially deleted in new
chr12	110910818	110920577	chr12:110910818-110920577	3	-	110911076	110920529	0	7	357,49,79,105,76,90,51,	0,2277,2427,3367,4896,8285,9708,
#Partially deleted in new
chr12	110910917	110920575	chr12:110910917-110920575	1	-	110911076	110920529	789624	6	258,49,79,139,90,49,	0,2178,2328,3268,8186,9609,
#Partially deleted in new
chr12	110913132	110914290	chr12:110913132-110914290	0	-	110913132	110913132	8553170	2	192,105,	0,1053,
#Partially deleted in new
chr12	110918828	110920722	chr12:110918828-110920722	0	-	110918828	110918828	8553170	2	365,196,	0,1698,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	110936584	110958208	chr12:110936584-110958208	3	+	110936584	110936584	8553170	3	114,223,187,	0,1705,21437,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	110936588	110943695	chr12:110936588-110943695	1	+	110936588	110936588	8553170	3	110,223,372,	0,1701,6735,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	110936606	110956832	chr12:110936606-110956832	1	+	110936606	110936606	8553170	3	92,223,359,	0,1683,19867,
#Partially deleted in new
chr12	111034023	111350554	chr12:111034023-111350554	3	+	111034177	111348325	0	22	217,111,48,79,135,124,77,67,49,105,192,59,49,100,642,102,764,160,270,189,274,3031,	0,180176,183866,229737,257394,259422,261309,262449,264517,270186,272897,273175,274261,274403,276017,278076,285988,288397,300417,304262,307756,313500,
#Partially deleted in new
chr12	111099445	111295346	chr12:111099445-111295346	0	+	111099581	111295346	789624	8	191,188,111,48,79,135,124,14,	0,484,114754,118444,164315,191972,194000,195887,
#Partially deleted in new
chr12	111214300	111270654	chr12:111214300-111270654	0	+	111214300	111214300	8553170	4	10,48,79,425,	0,3589,49460,55929,
#Deleted in new
chr12	111304141	111304209	chr12:111304141-111304209	3	+	111304141	111304141	5263520	1	68,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	111339526	111339621	chr12:111339526-111339621	7	+	111339526	111339526	16724991	1	95,	0,
#Deleted in new
chr12	111360679	111363749	chr12:111360679-111363749	3	-	111362677	111363427	0	2	2784,62,	0,3008,
#Deleted in new
chr12	111361214	111363712	chr12:111361214-111363712	1	-	111362677	111363427	0	2	2249,68,	0,2430,
#Partially deleted in new
chr12	111363076	111369095	chr12:111363076-111369095	0	-	111363076	111363427	789624	2	387,184,	0,5835,
#Partially deleted in new
chr12	111363203	111369099	chr12:111363203-111369099	0	-	111363203	111363427	789624	3	253,133,188,	0,2921,5708,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	111381866	111385638	chr12:111381866-111385638	7	+	111381866	111381866	16724991	5	342,322,317,414,410,	0,647,2165,2655,3362,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	111405947	111451623	chr12:111405947-111451623	3	+	111418145	111448302	789624	8	330,759,102,92,95,215,172,3641,	0,12171,40805,40994,41177,41382,41708,42035,
#Partially deleted in new
chr12	111418339	111444848	chr12:111418339-111444848	0	+	111418339	111444848	789624	2	538,110,	0,26399,
#Partially deleted in new
chr12	111434861	111449202	chr12:111434861-111449202	1	+	111434901	111448302	789624	7	166,102,92,95,215,172,1220,	0,11891,12080,12263,12468,12794,13121,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	111443484	111488532	chr12:111443484-111488532	0	-	111452047	111488532	789624	13	703,69,139,169,228,146,54,133,185,67,153,64,57,	0,7637,8462,10192,12544,13729,21177,26623,27073,41780,42228,43276,44991,
#Partially deleted in new
chr12	111452213	111599676	chr12:111452213-111599676	3	-	111452811	111599514	0	25	627,169,228,146,54,133,185,61,153,64,305,71,108,198,183,210,179,198,92,125,151,72,60,37,893,	0,1463,3815,5000,12448,17894,18344,33057,33499,34547,36262,57335,57677,58171,61143,63940,66035,67665,68668,72978,100066,100692,101944,103669,146570,
#Partially deleted in new
chr12	111452213	111598822	chr12:111452213-111598822	0	-	111452811	111598822	789624	25	627,169,228,146,54,133,185,67,153,64,305,71,108,198,183,210,179,198,92,125,151,72,60,37,39,	0,1463,3815,5000,12448,17894,18344,33051,33499,34547,36262,57335,57677,58171,61143,63940,66035,67665,68668,72978,100066,100692,101944,103669,146570,
#Partially deleted in new
chr12	111452213	111488612	chr12:111452213-111488612	0	-	111452732	111488612	789624	10	627,228,146,54,133,185,67,153,64,137,	0,3815,5000,12448,17894,18344,33051,33499,34547,36262,
#Partially deleted in new
chr12	111452213	111599350	chr12:111452213-111599350	1	-	111452811	111599034	789624	25	627,169,228,146,54,133,185,61,153,64,305,71,108,198,183,210,179,198,92,125,151,72,60,37,567,	0,1463,3815,5000,12448,17894,18344,33057,33499,34547,36262,57335,57677,58171,61143,63940,66035,67665,68668,72978,100066,100692,101944,103669,146570,
#Partially deleted in new
chr12	111452214	111599676	chr12:111452214-111599676	1	-	111452811	111554190	0	23	626,169,228,146,133,185,61,153,64,305,71,108,198,183,210,179,198,92,125,151,60,37,893,	0,1462,3814,4999,17893,18343,33056,33498,34546,36261,57334,57676,58170,61142,63939,66034,67664,68667,72977,100065,101943,103668,146569,
#Partially deleted in new
chr12	111452222	111599122	chr12:111452222-111599122	1	-	111452811	111599034	789624	26	618,169,228,146,54,133,185,33,67,153,64,305,71,108,198,183,210,179,198,92,125,151,72,60,37,339,	0,1454,3806,4991,12439,17885,18335,26847,33042,33490,34538,36253,57326,57668,58162,61134,63931,66026,67656,68659,72969,100057,100683,101935,103660,146561,
#Partially deleted in new
chr12	111452267	111599676	chr12:111452267-111599676	1	-	111452811	111599514	0	25	573,169,228,146,54,133,185,61,153,64,305,71,108,198,183,210,179,198,92,125,151,72,60,37,893,	0,1409,3761,4946,12394,17840,18290,33003,33445,34493,36208,57281,57623,58117,61089,63886,65981,67611,68614,72924,100012,100638,101890,103615,146516,
#Partially deleted in new
chr12	111452295	111599276	chr12:111452295-111599276	0	-	111470691	111599034	789624	24	545,169,228,146,54,133,185,153,64,305,71,108,198,183,210,179,198,92,125,151,72,60,37,493,	0,1381,3733,4918,12366,17812,18262,33417,34465,36180,57253,57595,58089,61061,63858,65953,67583,68586,72896,99984,100610,101862,103587,146488,
#Deleted in new
chr12	111452430	111454059	chr12:111452430-111454059	0	-	111452430	111452430	8553170	2	410,383,	0,1246,
#Partially deleted in new
chr12	111452444	111470673	chr12:111452444-111470673	0	-	111452811	111470673	789624	7	396,169,75,228,146,133,116,	0,1232,2600,3584,4769,17663,18113,
#Partially deleted in new
chr12	111452450	111470841	chr12:111452450-111470841	0	-	111452450	111452450	8553170	4	3806,146,133,284,	0,4763,17657,18107,
#Partially deleted in new
chr12	111452753	111599673	chr12:111452753-111599673	1	-	111452811	111554190	0	22	87,169,228,146,133,185,61,153,64,305,71,108,198,183,210,179,198,92,125,151,60,99,	0,923,3275,4460,17354,17804,32517,32959,34007,35722,56795,57137,57631,60603,63400,65495,67125,68128,72438,99526,101404,146821,
#Partially deleted in new
chr12	111452753	111599673	chr12:111452753-111599673	1	-	111452811	111554190	789624	26	87,169,75,228,146,54,133,185,61,153,64,305,71,108,198,183,210,179,198,92,125,151,72,60,37,99,	0,923,2291,3275,4460,11908,17354,17804,32517,32959,34007,35722,56795,57137,57631,60603,63400,65495,67125,68128,72438,99526,100152,101404,103129,146821,
#Deleted in new
chr12	111453319	111456112	chr12:111453319-111456112	0	-	111453569	111456112	789624	2	526,84,	0,2709,
#Partially deleted in new
chr12	111453485	111470240	chr12:111453485-111470240	0	-	111455998	111470240	789624	4	2771,146,54,133,	0,3728,11176,16622,
#Partially deleted in new
chr12	111455914	111457439	chr12:111455914-111457439	0	-	111455914	111455914	8553170	2	342,226,	0,1299,
#Partially deleted in new
chr12	111456081	111485744	chr12:111456081-111485744	0	-	111456081	111485744	789624	7	175,146,133,185,33,61,32,	0,1132,14026,14476,22988,29189,29631,
#Partially deleted in new
chr12	111456136	111485793	chr12:111456136-111485793	0	-	111456136	111485793	789624	5	120,146,33,67,81,	0,1077,22933,29128,29576,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	111456188	111458401	chr12:111456188-111458401	0	-	111456188	111456188	8553170	2	68,1188,	0,1025,
#Partially deleted in new
chr12	111456220	111471945	chr12:111456220-111471945	0	-	111456220	111456220	8553170	4	36,146,133,1388,	0,993,13887,14337,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	111457273	111510495	chr12:111457273-111510495	0	-	111457273	111457273	8553170	11	86,167,133,185,61,153,64,305,71,108,111,	0,3865,12834,13284,27997,28439,29487,31202,52275,52617,53111,
#Partially deleted in new
chr12	111464661	111486824	chr12:111464661-111486824	0	-	111482787	111486824	789624	7	54,133,185,45,61,153,64,	0,5446,5896,18125,20609,21051,22099,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr12	111468357	111599122	chr12:111468357-111599122	1	-	111470069	111599034	789624	20	1883,185,61,153,64,305,71,108,198,183,210,179,198,92,125,151,72,60,37,339,	0,2200,16913,17355,18403,20118,41191,41533,42027,44999,47796,49891,51521,52524,56834,83922,84548,85800,87525,130426,
#Partially deleted in new
chr12	111469425	111599122	chr12:111469425-111599122	1	-	111470069	111599034	789624	21	815,185,33,61,153,64,305,71,108,198,183,210,179,198,92,125,151,72,60,37,339,	0,1132,9644,15845,16287,17335,19050,40123,40465,40959,43931,46728,48823,50453,51456,55766,82854,83480,84732,86457,129358,
#Partially deleted in new
chr12	111469817	111485850	chr12:111469817-111485850	0	-	111469817	111469817	8553170	4	423,185,67,138,	0,740,15447,15895,
#Partially deleted in new
chr12	111485108	111486814	chr12:111485108-111486814	0	-	111485108	111485108	8553170	3	223,153,54,	0,604,1652,
#Partially deleted in new
chr12	111486790	111516339	chr12:111486790-111516339	0	-	111486790	111516339	789624	6	34,305,71,108,183,186,	0,1685,22758,23100,26566,29363,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	111488584	111512107	chr12:111488584-111512107	0	-	111488584	111488584	8553170	4	196,71,108,1723,	0,20964,21306,21800,
#Partially deleted in new
chr12	111509918	111520945	chr12:111509918-111520945	0	-	111509918	111520945	789624	5	80,183,179,198,64,	0,3438,8330,9960,10963,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	111512472	111598566	chr12:111512472-111598566	0	-	111512472	111512472	8553170	11	1067,210,179,198,92,125,151,72,60,37,651,	0,3681,5776,7406,8409,12719,39807,40433,41685,43410,85443,
#Partially deleted in new
chr12	111513473	111519967	chr12:111513473-111519967	0	-	111513473	111513473	8553170	3	66,179,136,	0,4775,6358,
#Partially deleted in new
chr12	111519912	111552734	chr12:111519912-111552734	0	-	111519912	111519912	8553170	4	164,92,125,455,	0,969,5279,32367,
#Partially deleted in new
chr12	111520004	111599062	chr12:111520004-111599062	0	-	111520004	111520004	8553170	4	72,92,125,279,	0,877,5187,78779,
#Partially deleted in new
chr12	111520019	111597807	chr12:111520019-111597807	0	-	111520019	111597805	789624	6	57,92,125,151,72,59,	0,862,5172,32260,32886,77729,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	111564820	111564883	chr12:111564820-111564883	3	-	111564820	111564820	8553170	1	63,	0,
#Partially deleted in new
chr12	111581378	111581773	chr12:111581378-111581773	7	+	111581378	111581378	16724991	1	395,	0,
#Partially deleted in new
chr12	111599497	111600256	chr12:111599497-111600256	3	+	111599497	111599497	789624	2	56,429,	0,330,
#Partially deleted in new
chr12	111642145	111685986	chr12:111642145-111685986	3	-	111644198	111685792	789624	12	2417,104,90,110,139,76,149,114,190,199,162,276,	0,7793,13420,16590,17061,18454,23493,30515,37005,39491,41000,43565,
#Partially deleted in new
chr12	111644081	111685720	chr12:111644081-111685720	1	-	111644198	111683299	789624	12	481,104,90,110,139,76,149,114,190,199,162,133,	0,5857,11484,14654,15125,16518,21557,28579,35069,37555,39064,41506,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	111644338	111673311	chr12:111644338-111673311	0	-	111644338	111644338	8553170	8	224,104,90,110,139,76,149,651,	0,5600,11227,14397,14868,16261,21300,28322,
#Deleted in new
chr12	111669851	111670362	chr12:111669851-111670362	7	-	111669851	111669851	16724991	1	511,	0,
#Partially deleted in new
chr12	111686055	111693134	chr12:111686055-111693134	0	+	111686055	111686055	8553170	2	184,438,	0,6641,
#Partially deleted in new
chr12	111686063	111702262	chr12:111686063-111702262	0	+	111692709	111702262	789624	4	176,24,200,101,	0,287,6633,16098,
#Partially deleted in new
chr12	111686067	111749132	chr12:111686067-111749132	0	+	111686067	111686067	8553170	18	172,200,149,195,159,160,142,69,182,151,146,174,401,141,138,91,159,122,	0,6629,16094,19670,23458,26430,29753,35603,41894,43738,47855,50763,58575,60076,60981,61227,62249,62943,
#Partially deleted in new
chr12	111686067	111709992	chr12:111686067-111709992	0	+	111686067	111686067	8553170	5	172,200,149,195,467,	0,6629,16094,19670,23458,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	111686070	111745634	chr12:111686070-111745634	1	+	111692709	111745061	789624	13	169,200,149,195,159,160,142,69,182,151,146,174,992,	0,6626,16091,19667,23455,26427,29750,35600,41891,43735,47852,50760,58572,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	111686076	111692749	chr12:111686076-111692749	0	+	111692709	111692749	789624	5	163,161,102,110,53,	0,1981,4375,4982,6620,
#Partially deleted in new
chr12	111686080	111721990	chr12:111686080-111721990	0	+	111686080	111686080	8553170	7	159,200,149,195,159,160,320,	0,6616,16081,19657,23445,26417,35590,
#Partially deleted in new
chr12	111686081	111746287	chr12:111686081-111746287	0	+	111744749	111746287	789624	3	158,401,144,	0,58561,60062,
#Partially deleted in new
chr12	111686097	111757097	chr12:111686097-111757097	1	+	111692709	111756473	789624	21	142,200,149,195,159,160,142,69,182,151,146,174,401,141,138,91,159,173,144,78,765,	0,6599,16064,19640,23428,26400,29723,35573,41864,43708,47825,50733,58545,60046,60951,61197,62219,63075,67674,69570,70235,
#Partially deleted in new
chr12	111705875	111729941	chr12:111705875-111729941	0	+	111705875	111705875	8553170	5	57,159,142,69,136,	0,3650,9945,15795,23930,
#Partially deleted in new
chr12	111712497	111734047	chr12:111712497-111734047	0	+	111712497	111734047	789624	5	160,142,69,182,125,	0,3323,9173,15464,21425,
#Partially deleted in new
chr12	111712523	111744948	chr12:111712523-111744948	0	+	111712523	111744948	789624	5	134,142,69,182,306,	0,3297,9147,15438,32119,
#Partially deleted in new
chr12	111712523	111721989	chr12:111712523-111721989	0	+	111712523	111712523	8553170	3	134,142,319,	0,3297,9147,
#Partially deleted in new
chr12	111715496	111728118	chr12:111715496-111728118	0	+	111715496	111715496	8553170	4	191,142,69,157,	0,324,6174,12465,
#Partially deleted in new
chr12	111715505	111757107	chr12:111715505-111757107	0	+	111715505	111715505	8553170	15	182,142,69,151,146,174,401,141,138,91,159,93,78,137,232,	0,315,6165,14300,18417,21325,29137,30638,31543,31789,32811,33505,40162,40706,41370,
#Partially deleted in new
chr12	111733789	111745049	chr12:111733789-111745049	0	+	111733789	111733789	8553170	3	279,174,407,	0,3041,10853,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	111736857	111749769	chr12:111736857-111749769	0	+	111736857	111736857	8553170	7	147,401,141,138,91,159,597,	0,7785,9286,10191,10437,11459,12315,
#Partially deleted in new
chr12	111744570	111747208	chr12:111744570-111747208	0	+	111744570	111744570	8553170	3	473,141,160,	0,1573,2478,
#Deleted in new
chr12	111747159	111749203	chr12:111747159-111749203	0	+	111747159	111747159	8553170	4	27,91,138,193,	0,135,428,1851,
#Deleted in new
chr12	111747159	111749203	chr12:111747159-111749203	0	+	111747159	111747159	8553170	4	27,91,159,193,	0,135,1157,1851,
#Deleted in new
chr12	111747291	111749203	chr12:111747291-111749203	0	+	111747291	111747291	8553170	4	94,138,159,31,	0,296,1025,1881,
#Partially deleted in new
chr12	111748745	111756520	chr12:111748745-111756520	0	+	111748745	111748745	8553170	4	600,144,78,188,	0,5026,6922,7587,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	111752729	111757099	chr12:111752729-111757099	0	+	111752729	111752729	8553170	2	1186,1432,	0,2938,
#Partially deleted in new
chr12	111753889	111791418	chr12:111753889-111791418	3	+	111753894	111791418	789624	8	26,78,105,141,80,112,129,113,	0,1778,28028,29268,31377,35933,36544,37416,
#Partially deleted in new
chr12	111766886	111809638	chr12:111766886-111809638	1	+	111766982	111809575	0	12	210,105,80,112,129,114,103,185,165,158,115,96,	0,15031,18380,22936,23547,24419,25174,25711,31191,33019,36972,42656,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	111766921	111817529	chr12:111766921-111817529	3	+	111766982	111809575	0	13	175,105,141,80,112,129,114,103,185,165,158,115,7987,	0,14996,16236,18345,22901,23512,24384,25139,25676,31156,32984,36937,42621,
#Partially deleted in new
chr12	111766947	111809630	chr12:111766947-111809630	0	+	111766982	111781927	789624	14	149,116,105,141,80,112,129,114,103,185,165,158,115,88,	0,8657,14970,16210,18319,22875,23486,24358,25113,25650,31130,32958,36911,42595,
#Partially deleted in new
chr12	111792610	111809670	chr12:111792610-111809670	0	+	111792610	111803873	789624	4	172,165,115,128,	0,5467,11248,16932,
#Deleted in new
chr12	111799833	111799905	chr12:111799833-111799905	3	+	111799833	111799833	5263520	1	72,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	111812792	111813420	chr12:111812792-111813420	0	+	111812792	111812792	8553170	2	359,210,	0,418,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	111839763	111842902	chr12:111839763-111842902	3	-	111839763	111839763	789624	2	714,1576,	0,1563,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	111839766	111841902	chr12:111839766-111841902	0	-	111839766	111839766	789624	2	711,219,	0,1917,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	111839767	111842902	chr12:111839767-111842902	0	-	111839767	111839767	8553170	3	236,145,1576,	0,565,1559,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	111839769	111841906	chr12:111839769-111841906	0	-	111839769	111839769	789624	3	234,145,223,	0,563,1914,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	111839776	111841710	chr12:111839776-111841710	1	-	111839776	111839776	8553170	4	227,145,144,27,	0,556,1550,1907,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	111839806	111841706	chr12:111839806-111841706	0	-	111839806	111839806	8553170	2	225,380,	0,1520,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	111839909	111841710	chr12:111839909-111841710	0	-	111839909	111839909	8553170	3	133,145,384,	0,423,1417,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	111841977	111902238	chr12:111841977-111902238	1	+	111842733	111893061	789624	14	792,74,76,98,109,90,96,81,188,121,131,116,105,9272,	0,23272,24178,25594,26775,28293,29107,38469,41603,43938,46510,46907,48062,50989,
#Deleted in new
chr12	111842474	111843396	chr12:111842474-111843396	1	+	111842733	111843317	789624	3	295,110,89,	0,628,833,
#Partially deleted in new
chr12	111842482	111888525	chr12:111842482-111888525	0	+	111842733	111882801	789624	7	287,96,81,64,188,121,38,	0,28602,37964,40307,41098,43433,46005,
#Partially deleted in new
chr12	111842487	111870307	chr12:111842487-111870307	0	+	111842487	111842487	8553170	5	282,74,76,98,37,	0,22762,23668,25084,27783,
#Partially deleted in new
chr12	111842625	111893161	chr12:111842625-111893161	3	+	111842733	111893061	789624	14	144,74,76,98,109,90,96,81,188,121,131,122,105,195,	0,22624,23530,24946,26127,27645,28459,37821,40955,43290,45862,46259,47414,50341,
#Partially deleted in new
chr12	111842733	111893060	chr12:111842733-111893060	0	+	111842733	111893060	789624	9	36,96,81,188,121,131,122,105,94,	0,28351,37713,40847,43182,45754,46151,47306,50233,
#Deleted in new
chr12	111843031	111843423	chr12:111843031-111843423	0	+	111843031	111843031	8553170	1	392,	0,
#Partially deleted in new
chr12	111879337	111880249	chr12:111879337-111880249	7	-	111879337	111879337	16724991	2	39,564,	0,348,
#Partially deleted in new
chr12	111885437	111890141	chr12:111885437-111890141	0	+	111885437	111885437	8553170	4	599,131,122,102,	0,3050,3447,4602,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	111887577	111893157	chr12:111887577-111893157	0	+	111887577	111887577	8553170	4	1041,122,105,191,	0,1307,2462,5389,
#Partially deleted in new
chr12	111889232	111896539	chr12:111889232-111896539	0	+	111889232	111889232	8553170	4	912,56,72,320,	0,3734,4281,6987,
#Deleted in new
chr12	111899262	111901391	chr12:111899262-111901391	7	+	111899262	111899262	16724991	1	2129,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	111927017	111929017	chr12:111927017-111929017	7	+	111927017	111927017	16724991	1	2000,	0,
#Partially deleted in new
chr12	111931281	112013125	chr12:111931281-112013125	3	-	111931620	111943303	789624	10	546,74,145,139,84,50,105,132,47,124,	0,1304,2604,5410,5878,6879,11983,60476,73975,81720,
#Partially deleted in new
chr12	111931297	112013139	chr12:111931297-112013139	1	-	111931620	112005270	789624	10	530,74,145,139,84,50,132,64,47,138,	0,1288,2588,5394,5862,6863,60460,72502,73959,81704,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	111931298	112013131	chr12:111931298-112013131	0	-	111978754	112005270	789624	13	529,74,145,139,84,50,105,165,52,132,64,47,130,	0,1287,2587,5393,5861,6862,11966,34296,47437,60459,72501,73958,81703,
#Partially deleted in new
chr12	111931369	112013135	chr12:111931369-112013135	1	-	111931620	111937189	789624	9	458,74,145,84,50,105,132,47,134,	0,1216,2516,5790,6791,11895,60388,73887,81632,
#Partially deleted in new
chr12	111931369	112013111	chr12:111931369-112013111	1	-	111931620	112005270	789624	11	458,74,145,139,84,50,105,132,64,47,110,	0,1216,2516,5322,5790,6791,11895,60388,72430,73887,81632,
#Partially deleted in new
chr12	111931379	112013152	chr12:111931379-112013152	0	-	111931379	111931379	8553170	10	448,146,145,89,84,50,105,132,47,151,	0,1206,2506,5362,5780,6781,11885,60378,73877,81622,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	111932584	112013139	chr12:111932584-112013139	0	-	111932584	111932584	8553170	9	75,2945,84,50,105,132,64,47,138,	0,1301,4575,5576,10680,59173,71215,72672,80417,
#Partially deleted in new
chr12	111936691	112006024	chr12:111936691-112006024	0	-	111936691	111943303	789624	8	139,84,50,105,132,47,85,76,	0,468,1469,6573,55066,68565,68910,69257,
#Partially deleted in new
chr12	111936754	112006030	chr12:111936754-112006030	0	-	111936754	112005270	789624	8	76,84,50,105,132,64,47,82,	0,405,1406,6510,55003,67045,68502,69194,
#Partially deleted in new
chr12	111938046	112013166	chr12:111938046-112013166	0	-	111938046	111938046	8553170	5	164,132,64,47,165,	0,53711,65753,67210,74955,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	111938183	112013165	chr12:111938183-112013165	0	-	111965711	112005270	789624	6	27,165,132,64,47,164,	0,27411,53574,65616,67073,74818,
#Partially deleted in new
chr12	111943260	112006126	chr12:111943260-112006126	0	-	111943260	112005270	789624	6	109,132,64,47,85,178,	0,48497,60539,61996,62341,62688,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	111965591	112013165	chr12:111965591-112013165	0	-	111965591	111965591	8553170	4	168,132,47,164,	0,26166,39665,47410,
#Partially deleted in new
chr12	111991743	112006005	chr12:111991743-112006005	0	-	111991743	112005270	789624	4	146,64,47,62,	0,12056,13513,14200,
#Partially deleted in new
chr12	111991813	112005985	chr12:111991813-112005985	0	-	111991813	112005270	789624	4	76,64,47,384,	0,11986,13443,13788,
#Deleted in new
chr12	111992995	111993875	chr12:111992995-111993875	7	+	111992995	111992995	16724991	1	880,	0,
#Deleted in new
chr12	112000738	112000985	chr12:112000738-112000985	7	-	112000738	112000738	16724991	1	247,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	112003568	112013144	chr12:112003568-112013144	0	-	112003568	112003568	8553170	3	295,47,143,	0,1688,9433,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	112010424	112013185	chr12:112010424-112013185	0	-	112010424	112010424	8553170	1	2761,	0,
#Partially deleted in new
chr12	112013315	112023451	chr12:112013315-112023451	3	+	112013465	112022652	0	3	294,139,1302,	0,6440,8834,
#Partially deleted in new
chr12	112013347	112023220	chr12:112013347-112023220	1	+	112013465	112022167	0	2	262,1071,	0,8802,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	112013428	112015325	chr12:112013428-112015325	0	+	112013428	112013428	8553170	2	181,735,	0,1162,
#Partially deleted in new
chr12	112013479	112019836	chr12:112013479-112019836	0	+	112013479	112019836	789624	2	130,154,	0,6203,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	112018803	112023168	chr12:112018803-112023168	1	+	112022169	112022652	789624	3	540,139,1019,	0,952,3346,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	112018803	112019430	chr12:112018803-112019430	3	-	112018803	112018803	8553170	1	627,	0,
#Partially deleted in new
chr12	112026688	112109022	chr12:112026688-112109022	3	-	112029530	112108773	789624	24	2965,147,111,98,66,124,244,126,152,100,181,90,208,113,170,90,112,79,108,75,119,139,86,307,	0,6544,12540,13792,15350,16399,16936,20976,21603,26869,27699,33581,34492,42191,45206,47986,48989,51499,51945,54371,60994,64037,66362,82027,
#Partially deleted in new
chr12	112027787	112108785	chr12:112027787-112108785	0	-	112027787	112027787	8553170	23	1866,147,1350,66,124,244,126,152,100,181,90,208,113,170,90,112,79,108,75,119,139,86,70,	0,5445,11441,14251,15300,15837,19877,20504,25770,26600,32482,33393,41092,44107,46887,47890,50400,50846,53272,59895,62938,65263,80928,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	112029386	112035405	chr12:112029386-112035405	0	-	112029386	112029386	8553170	2	267,2173,	0,3846,
#Partially deleted in new
chr12	112029549	112108796	chr12:112029549-112108796	0	-	112081114	112108773	789624	24	104,147,111,98,66,124,244,126,152,129,100,181,90,208,113,170,90,112,79,108,75,139,86,81,	0,3683,9679,10931,12489,13538,14075,18115,18742,19933,24008,24838,30720,31631,39330,42345,45125,46128,48638,49084,51510,61176,63501,79166,
#Deleted in new
chr12	112037598	112037715	chr12:112037598-112037715	3	-	112037598	112037598	5263520	1	117,	0,
#Partially deleted in new
chr12	112039261	112042311	chr12:112039261-112042311	0	-	112039261	112039261	8553170	3	78,98,273,	0,1219,2777,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr12	112039269	112108779	chr12:112039269-112108779	0	-	112097385	112108773	789624	23	70,98,66,124,244,126,152,100,181,90,208,113,170,90,112,79,108,75,119,139,86,201,64,	0,1211,2769,3818,4355,8395,9022,14288,15118,21000,21911,29610,32625,35405,36408,38918,39364,41790,48413,51456,53781,57971,69446,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	112063908	112065755	chr12:112063908-112065755	3	+	112063908	112063908	8553170	2	362,234,	0,1613,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	112069103	112069209	chr12:112069103-112069209	3	+	112069103	112069103	8553170	1	106,	0,
#Partially deleted in new
chr12	112078681	112108743	chr12:112078681-112108743	0	-	112078681	112108743	789624	5	60,75,119,139,28,	0,2378,9001,12044,30034,
#Partially deleted in new
chr12	112090311	112108770	chr12:112090311-112108770	0	-	112090311	112090311	8553170	2	553,55,	0,18404,
#Partially deleted in new
chr12	112125500	112153609	chr12:112125500-112153609	3	+	112130522	112152791	0	12	118,59,136,54,406,207,77,231,121,340,73,875,	0,5010,9237,9512,15318,16588,20085,22573,24250,26300,26926,27234,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	112125537	112141491	chr12:112125537-112141491	0	+	112125537	112125537	8553170	5	81,59,136,54,673,	0,4973,9200,9475,15281,
#Partially deleted in new
chr12	112125544	112153603	chr12:112125544-112153603	1	+	112130522	112152791	0	12	605,59,136,54,406,207,77,231,121,340,73,869,	0,4966,9193,9468,15274,16544,20041,22529,24206,26256,26882,27190,
#Partially deleted in new
chr12	112125544	112140986	chr12:112125544-112140986	0	+	112130522	112140986	789624	5	74,100,136,54,168,	0,4925,9193,9468,15274,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	112125553	112142148	chr12:112125553-112142148	0	+	112130522	112140166	789624	7	65,59,136,54,87,406,60,	0,4957,9184,9459,14565,15265,16535,
#Partially deleted in new
chr12	112125556	112140910	chr12:112125556-112140910	0	+	112134801	112140910	789624	6	62,59,181,136,54,92,	0,4954,7583,9181,9456,15262,
#Partially deleted in new
chr12	112125559	112149808	chr12:112125559-112149808	0	+	112130522	112142184	0	9	59,59,136,54,162,207,77,231,58,	0,4951,9178,9453,15259,16529,20026,22514,24191,
#Partially deleted in new
chr12	112125562	112142295	chr12:112125562-112142295	0	+	112130522	112142295	789624	7	56,65,59,136,54,406,207,	0,522,4948,9175,9450,15256,16526,
#Partially deleted in new
chr12	112141952	112148213	chr12:112141952-112148213	0	+	112141952	112141952	8553170	3	343,77,140,	0,3633,6121,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	112149359	112149472	chr12:112149359-112149472	3	+	112149359	112149359	8553170	1	113,	0,
#Partially deleted in new
chr12	112160187	112382092	chr12:112160187-112382092	1	-	112162386	112319487	789624	76	2336,223,196,167,222,104,156,120,147,191,124,107,152,224,208,1307,180,206,131,206,182,161,137,138,127,137,238,164,80,149,162,104,116,170,165,183,136,203,82,190,281,154,185,147,167,142,136,176,89,105,193,234,164,135,120,199,101,154,125,129,121,106,71,146,233,141,114,159,193,171,139,109,131,90,518,141,	0,2854,3354,3921,7129,7626,9315,10145,10929,12483,15548,16408,18743,18986,22871,23999,30598,32372,32873,33281,34697,40450,43448,44298,47686,48306,49827,52299,56104,56585,56846,59198,66455,67901,68459,69510,70499,71325,72816,74889,75316,76757,78864,79693,83165,83432,83686,86713,87274,87879,88132,89956,90783,92236,93855,96132,98308,98924,101117,103896,104987,105690,106724,109516,110039,113467,114659,119040,122922,145876,148565,149373,152829,154269,159037,221764,
#Partially deleted in new
chr12	112160189	112382439	chr12:112160189-112382439	3	-	112162386	112382128	789624	76	2334,223,196,167,222,104,156,120,147,191,124,107,152,224,208,1307,180,206,131,206,182,161,137,138,127,137,238,164,80,149,162,104,116,170,165,183,136,203,82,190,281,154,185,147,167,142,136,176,89,105,193,234,164,105,120,199,101,154,125,123,121,106,71,146,233,141,114,159,193,171,139,109,131,90,518,488,	0,2852,3352,3919,7127,7624,9313,10143,10927,12481,15546,16406,18741,18984,22869,23997,30596,32370,32871,33279,34695,40448,43446,44296,47684,48304,49825,52297,56102,56583,56844,59196,66453,67899,68457,69508,70497,71323,72814,74887,75314,76755,78862,79691,83163,83430,83684,86711,87272,87877,88130,89954,90781,92234,93853,96130,98306,98922,101115,103900,104985,105688,106722,109514,110037,113465,114657,119038,122920,145874,148563,149371,152827,154267,159035,221762,
#Deleted in new
chr12	112160262	112162262	chr12:112160262-112162262	0	-	112160262	112160262	8553170	3	382,112,49,	0,599,1951,
#Deleted in new
chr12	112160321	112161102	chr12:112160321-112161102	0	-	112160321	112160321	8553170	2	323,241,	0,540,
#Partially deleted in new
chr12	112162768	112170185	chr12:112162768-112170185	0	-	112162768	112162768	8553170	6	496,196,167,222,104,683,	0,773,1340,4548,5045,6734,
#Deleted in new
chr12	112163257	112163321	chr12:112163257-112163321	3	-	112163257	112163257	5263520	1	64,	0,
#Deleted in new
chr12	112166180	112167881	chr12:112166180-112167881	0	-	112166180	112166180	8553170	2	1358,68,	0,1633,
#Partially deleted in new
chr12	112170739	112176702	chr12:112170739-112176702	0	-	112170982	112176702	789624	4	608,191,124,107,	0,1931,4996,5856,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	112194996	112201438	chr12:112194996-112201438	0	-	112194996	112194996	8553170	3	70,161,312,	0,5641,6130,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	112202962	112228176	chr12:112202962-112228176	0	-	112202962	112202962	8553170	12	810,138,127,137,238,164,80,149,162,104,116,88,	0,1523,4911,5531,7052,9524,13329,13810,14071,16423,23680,25126,
#Partially deleted in new
chr12	112216820	112219580	chr12:112216820-112219580	0	-	112216820	112216820	8553170	3	101,162,195,	0,213,2565,
#Partially deleted in new
chr12	112226453	112231463	chr12:112226453-112231463	0	-	112226453	112226453	8553170	5	367,170,158,183,777,	0,1635,2193,3244,4233,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	112249556	112273793	chr12:112249556-112273793	0	-	112249556	112249556	8553170	15	821,164,105,120,199,101,154,125,129,121,106,71,146,233,139,	0,1414,2867,4486,6763,8939,9555,11748,14527,15618,16321,17355,20147,20670,24098,
#Partially deleted in new
chr12	112256799	112259091	chr12:112256799-112259091	3	+	112256799	112256799	8553170	2	54,697,	0,1595,
#Partially deleted in new
chr12	112258379	112262136	chr12:112258379-112262136	0	-	112258379	112258379	8553170	3	217,154,832,	0,732,2925,
#Partially deleted in new
chr12	112265932	112382092	chr12:112265932-112382092	0	-	112269838	112382092	789624	5	51,71,146,178,141,	0,979,3771,53632,116019,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	112267076	112267394	chr12:112267076-112267394	3	+	112267076	112267076	8553170	1	318,	0,
#Deleted in new
chr12	112301869	112302663	chr12:112301869-112302663	7	-	112301869	112301869	16724991	1	794,	0,
#Partially deleted in new
chr12	112321758	112323089	chr12:112321758-112323089	7	+	112321758	112321758	16724991	3	191,98,589,	0,368,742,
#Deleted in new
chr12	112405189	112406344	chr12:112405189-112406344	0	-	112405189	112405189	8553170	2	848,51,	0,1104,
#Partially deleted in new
chr12	112405198	112409641	chr12:112405198-112409641	3	-	112405223	112408656	0	7	178,185,49,144,99,237,55,	0,654,1095,1548,3041,3221,4388,
#Partially deleted in new
chr12	112405202	112409596	chr12:112405202-112409596	1	-	112405223	112408656	0	7	174,185,49,144,99,237,186,	0,650,1091,1544,3037,3217,4208,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	112406293	112409635	chr12:112406293-112409635	0	-	112406293	112406293	8553170	3	49,1910,49,	0,453,3293,
#Partially deleted in new
chr12	112406298	112410370	chr12:112406298-112410370	0	-	112406298	112408242	789624	4	44,144,99,51,	0,448,1941,4021,
#Partially deleted in new
chr12	112406342	112409605	chr12:112406342-112409605	0	-	112406342	112406342	8553170	4	727,99,237,19,	0,1897,2077,3244,
#Partially deleted in new
chr12	112406628	112409593	chr12:112406628-112409593	0	-	112406628	112406628	8553170	4	262,99,237,183,	0,1611,1791,2782,
#Partially deleted in new
chr12	112406746	112409574	chr12:112406746-112409574	0	-	112406746	112408656	789624	4	144,99,237,534,	0,1493,1673,2294,
#Partially deleted in new
chr12	112406747	112409311	chr12:112406747-112409311	0	-	112406747	112408656	789624	4	143,99,237,109,	0,1492,1672,2455,
#Partially deleted in new
chr12	112406865	112418838	chr12:112406865-112418838	0	-	112406865	112408656	789624	6	25,99,237,86,142,111,	0,1374,1554,3454,4435,11862,
#Partially deleted in new
chr12	112406870	112409574	chr12:112406870-112409574	0	-	112406870	112408656	789624	4	20,99,237,82,	0,1369,1549,2622,
#Deleted in new
chr12	112408020	112409614	chr12:112408020-112409614	0	-	112408020	112408020	8553170	3	318,237,28,	0,399,1566,
#Deleted in new
chr12	112408259	112408952	chr12:112408259-112408952	0	-	112408259	112408656	789624	2	79,533,	0,160,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	112418350	112419081	chr12:112418350-112419081	0	+	112418350	112418350	8553170	2	54,519,	0,212,
#Partially deleted in new
chr12	112418908	112486923	chr12:112418908-112486923	1	+	112419111	112486633	0	11	217,123,195,193,117,114,97,80,159,132,449,	0,27367,31409,34286,35655,37041,54035,58742,58948,63165,67566,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	112418913	112509913	chr12:112418913-112509913	3	+	112419111	112504764	0	16	212,123,195,193,117,114,97,80,159,132,155,68,152,113,102,4089,	0,27362,31404,34281,35650,37036,54030,58737,58943,63160,67561,69529,70110,83230,85781,86911,
#Partially deleted in new
chr12	112418958	112454799	chr12:112418958-112454799	1	+	112419111	112454799	789624	6	167,123,195,193,117,6,	0,27317,31359,34236,35605,35835,
#Partially deleted in new
chr12	112419111	112504764	chr12:112419111-112504764	1	+	112419111	112504764	0	15	14,123,195,193,117,114,97,80,159,132,167,68,152,113,70,	0,27164,31206,34083,35452,36838,53832,58539,58745,62962,67351,69331,69912,83032,85583,
#Partially deleted in new
chr12	112477931	112489151	chr12:112477931-112489151	0	+	112477931	112489151	789624	5	84,132,176,68,128,	0,4142,8522,10511,11092,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	112570379	112847731	chr12:112570379-112847731	2	+	112828318	112847731	789624	7	165,50,61,121,89,12,36,	0,79034,81387,221763,257921,266111,277316,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	112570425	112865495	chr12:112570425-112865495	0	+	112828318	112865495	789624	6	119,121,89,12,147,82,	0,221717,257875,266065,277270,294988,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	112575026	112865465	chr12:112575026-112865465	0	+	112828318	112865465	789624	8	38,50,61,82,89,12,147,52,	0,74387,76740,142979,253274,261464,272669,290387,
#Partially deleted in new
chr12	112575096	112896914	chr12:112575096-112896914	1	+	112828318	112896780	789624	22	223,121,89,12,147,130,84,166,39,147,87,63,225,80,75,110,127,57,155,82,97,265,	0,217046,253204,261394,272599,290317,291660,293333,294662,294796,299987,300582,301545,304022,306675,308196,312700,314927,315752,319481,320680,321553,
#Partially deleted in new
chr12	112575142	112868530	chr12:112575142-112868530	0	+	112828318	112868530	789624	7	177,89,12,147,130,84,101,	0,253158,261348,272553,290271,291614,293287,
#Partially deleted in new
chr12	112591559	112866777	chr12:112591559-112866777	0	+	112828318	112866777	789624	7	41,121,89,12,147,130,21,	0,200583,236741,244931,256136,273854,275197,
#Partially deleted in new
chr12	112791148	112868476	chr12:112791148-112868476	0	+	112828318	112868476	789624	8	30,121,89,12,147,130,84,47,	0,994,37152,45342,56547,74265,75608,77281,
#Partially deleted in new
chr12	112791345	112865529	chr12:112791345-112865529	0	+	112828318	112865529	789624	6	53,121,89,12,147,116,	0,797,36955,45145,56350,74068,
#Partially deleted in new
chr12	112791537	112865543	chr12:112791537-112865543	0	+	112828318	112865543	789624	6	73,121,89,12,147,130,	0,605,36763,44953,56158,73876,
#Partially deleted in new
chr12	112791654	112898877	chr12:112791654-112898877	1	+	112828318	112896780	789624	22	358,121,89,12,147,130,84,166,39,147,87,63,225,80,75,110,127,57,155,82,97,2228,	0,488,36646,44836,56041,73759,75102,76775,78104,78238,83429,84024,84987,87464,90117,91638,96142,98369,99194,102923,104122,104995,
#Partially deleted in new
chr12	112791910	112866839	chr12:112791910-112866839	0	+	112847813	112866839	789624	6	102,121,12,147,130,83,	0,232,44580,55785,73503,74846,
#Partially deleted in new
chr12	112791921	112866773	chr12:112791921-112866773	0	+	112828318	112866773	789624	7	63,121,89,12,147,130,17,	0,221,36379,44569,55774,73492,74835,
#Partially deleted in new
chr12	112791936	112897453	chr12:112791936-112897453	1	+	112828318	112896780	789624	21	76,121,89,147,130,84,166,39,147,87,63,225,80,75,110,127,57,155,82,97,804,	0,206,36364,55759,73477,74820,76493,77822,77956,83147,83742,84705,87182,89835,91356,95860,98087,98912,102641,103840,104713,
#Partially deleted in new
chr12	112792015	112898881	chr12:112792015-112898881	1	+	112828318	112896780	789624	21	248,89,12,147,130,84,166,39,147,87,63,225,80,75,110,127,57,155,82,97,2232,	0,36285,44475,55680,73398,74741,76414,77743,77877,83068,83663,84626,87103,89756,91277,95781,98008,98833,102562,103761,104634,
#Partially deleted in new
chr12	112792129	112865587	chr12:112792129-112865587	0	+	112792129	112792129	8553170	5	134,89,4,147,174,	0,36171,44369,55566,73284,
#Partially deleted in new
chr12	112792184	112866797	chr12:112792184-112866797	0	+	112828318	112866797	789624	7	79,64,89,12,147,130,41,	0,21137,36116,44306,55511,73229,74572,
#Partially deleted in new
chr12	112792187	112897177	chr12:112792187-112897177	1	+	112828318	112896780	789624	20	76,89,12,130,84,166,39,147,87,63,225,80,75,110,127,57,155,82,97,528,	0,36113,44303,73226,74569,76242,77571,77705,82896,83491,84454,86931,89584,91105,95609,97836,98661,102390,103589,104462,
#Partially deleted in new
chr12	112792246	112866799	chr12:112792246-112866799	0	+	112828318	112836493	789624	7	17,89,109,12,147,130,43,	0,36054,39498,44244,55449,73167,74510,
#Partially deleted in new
chr12	112850790	112869918	chr12:112850790-112869918	0	+	112850790	112850790	8553170	6	124,130,84,166,39,26,	0,14623,15966,17639,18968,19102,
#Partially deleted in new
chr12	112868146	112898881	chr12:112868146-112898881	0	+	112868146	112868146	8553170	14	1651,147,87,63,225,80,75,110,127,57,155,82,97,2232,	0,1746,6937,7532,8495,10972,13625,15146,19650,21877,22702,26431,27630,28503,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	112873869	112883343	chr12:112873869-112883343	0	+	112873869	112873869	8553170	8	289,173,87,63,225,80,75,51,	0,915,1214,1809,2772,5249,7902,9423,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	112883358	112891188	chr12:112883358-112891188	0	+	112883358	112883358	8553170	4	44,127,57,340,	0,4438,6665,7490,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	112892867	112897295	chr12:112892867-112897295	0	+	112892867	112892867	8553170	3	1792,97,646,	0,2909,3782,
#Deleted in new
chr12	112895412	112898537	chr12:112895412-112898537	0	+	112895412	112895412	8553170	2	461,1888,	0,1237,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	112906776	112919903	chr12:112906776-112919903	1	+	112907039	112919553	0	6	443,289,185,230,154,515,	0,1759,4274,9732,10770,12612,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	112906782	112919875	chr12:112906782-112919875	3	+	112907039	112919693	0	6	437,289,185,230,154,389,	0,1753,4268,9726,10764,12704,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	112906849	112918462	chr12:112906849-112918462	1	+	112907039	112917757	0	5	370,289,185,230,916,	0,1686,4201,9659,10697,
#Partially deleted in new
chr12	112906965	112916578	chr12:112906965-112916578	0	+	112907039	112916578	789624	2	254,70,	0,9543,
#Partially deleted in new
chr12	112906972	112916955	chr12:112906972-112916955	0	+	112906972	112906972	8553170	4	247,289,138,447,	0,1563,4125,9536,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	112907006	112933222	chr12:112907006-112933222	1	+	112907039	112931922	789624	6	213,289,185,230,154,1345,	0,1529,4044,9502,10540,24871,
#Partially deleted in new
chr12	112907037	112909017	chr12:112907037-112909017	1	+	112907039	112908889	789624	2	182,482,	0,1498,
#Partially deleted in new
chr12	112907051	112916816	chr12:112907051-112916816	0	+	112907051	112916775	789624	4	168,289,185,308,	0,1484,3999,9457,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	112907627	113017751	chr12:112907627-113017751	3	-	112907627	112907627	8553170	3	130,92,353,	0,959,109771,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	112916616	112919210	chr12:112916616-112919210	0	+	112916616	112918713	789624	3	122,154,614,	0,930,1980,
#Partially deleted in new
chr12	112919388	112932142	chr12:112919388-112932142	0	+	112919388	112931881	789624	2	44,265,	0,12489,
#Partially deleted in new
chr12	112919485	112932142	chr12:112919485-112932142	0	+	112919485	112919553	789624	2	130,265,	0,12392,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	112938351	112973249	chr12:112938351-112973249	3	+	112938530	112969973	0	16	356,283,176,239,154,345,283,176,251,145,174,286,176,239,148,3288,	0,3218,6124,8391,9594,10509,12341,22719,24300,24961,25883,27392,29066,29584,31256,31610,
#Partially deleted in new
chr12	112938443	112942303	chr12:112938443-112942303	1	+	112938530	112941926	789624	2	264,734,	0,3126,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	112938459	112945336	chr12:112938459-112945336	1	+	112938530	112944687	789624	3	248,283,861,	0,3110,6016,
#Partially deleted in new
chr12	112938545	112946979	chr12:112938545-112946979	0	+	112938545	112938545	8553170	3	162,176,237,	0,5930,8197,
#Partially deleted in new
chr12	112950572	112961224	chr12:112950572-112961224	0	+	112950572	112950572	8553170	2	403,154,	0,10498,
#Partially deleted in new
chr12	112964337	112968054	chr12:112964337-112968054	0	+	112964337	112968054	789624	4	71,133,176,119,	0,1559,3080,3598,
#Deleted in new
chr12	112969331	112970705	chr12:112969331-112970705	0	+	112969331	112969331	8553170	2	424,744,	0,630,
#Partially deleted in new
chr12	112978394	113011723	chr12:112978394-113011723	3	+	112978608	113010484	789624	11	391,271,179,236,145,171,289,188,239,154,1350,	0,8643,16901,19125,19871,24537,26539,28018,29310,30692,31979,
#Partially deleted in new
chr12	112978401	113011718	chr12:112978401-113011718	1	+	112978608	113009255	789624	10	384,271,179,236,145,171,289,188,239,2632,	0,8636,16894,19118,19864,24530,26532,28011,29303,30685,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	112978481	112988805	chr12:112978481-112988805	1	+	112978608	112987379	789624	2	304,1768,	0,8556,
#Partially deleted in new
chr12	112978539	113002958	chr12:112978539-113002958	0	+	112978608	113002958	789624	6	246,46,179,236,145,27,	0,8498,16756,18980,19726,24392,
#Partially deleted in new
chr12	112978589	113011216	chr12:112978589-113011216	1	+	112978608	113010508	789624	12	196,271,179,236,145,171,289,188,239,154,108,732,	0,8448,16706,18930,19676,24342,26344,27823,29115,30497,31784,31895,
#Partially deleted in new
chr12	112978601	112998410	chr12:112978601-112998410	0	+	112978608	112995301	789624	4	184,179,236,145,	0,16694,18918,19664,
#Partially deleted in new
chr12	112998244	113005117	chr12:112998244-113005117	0	+	112998244	112998244	8553170	3	166,171,184,	0,4687,6689,
#Partially deleted in new
chr12	113015606	113016098	chr12:113015606-113016098	7	+	113015606	113015606	16724991	1	492,	0,
#Deleted in new
chr12	113054061	113054435	chr12:113054061-113054435	7	+	113054061	113054061	16724991	1	374,	0,
#Deleted in new
chr12	113056708	113058152	chr12:113056708-113058152	0	+	113056708	113056708	8553170	2	236,704,	0,740,
#Partially deleted in new
chr12	113057689	113098028	chr12:113057689-113098028	3	+	113058192	113096939	789624	9	762,682,62,162,62,159,162,90,1314,	0,19734,35472,35849,36348,37099,37352,37635,39025,
#Partially deleted in new
chr12	113089865	113097997	chr12:113089865-113097997	0	+	113089865	113089865	8553170	8	195,62,162,62,159,162,90,1283,	0,3296,3673,4172,4923,5176,5459,6849,
#Partially deleted in new
chr12	113093489	113094947	chr12:113093489-113094947	0	+	113093489	113093489	8553170	3	211,62,159,	0,548,1299,
#Deleted in new
chr12	113095039	113095623	chr12:113095039-113095623	0	+	113095039	113095039	8553170	2	164,299,	0,285,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr12	113098818	113136224	chr12:113098818-113136224	1	-	113099928	113135462	789624	22	1250,53,121,136,138,173,145,141,193,113,65,154,118,89,132,82,130,62,114,57,202,149,	0,1809,3070,5127,5342,6895,8278,9266,13267,15981,16381,16816,17115,18254,20309,20543,22690,28993,29246,32066,36579,37257,
#Partially deleted in new
chr12	113099277	113136239	chr12:113099277-113136239	3	-	113099928	113135462	789624	22	791,53,121,136,138,170,145,138,193,113,65,154,118,89,132,82,130,62,114,57,202,179,	0,1350,2611,4668,4883,6436,7819,8807,12808,15522,15922,16357,16656,17795,19850,20084,22231,28534,28787,31607,36120,36783,
#Partially deleted in new
chr12	113099507	113135750	chr12:113099507-113135750	1	-	113099928	113135462	789624	21	561,53,121,136,54,170,145,138,193,113,65,154,118,89,132,82,130,62,114,57,353,	0,1120,2381,4438,4653,6206,7589,8577,12578,15292,15692,16127,16426,17565,19620,19854,22001,28304,28557,31377,35890,
#Partially deleted in new
chr12	113099511	113103099	chr12:113099511-113103099	0	-	113099511	113099511	8553170	4	557,53,121,164,	0,1116,2377,3424,
#Partially deleted in new
chr12	113099886	113135504	chr12:113099886-113135504	1	-	113099928	113135462	789624	21	182,53,121,136,138,173,145,138,193,113,65,154,118,89,132,82,130,62,114,57,107,	0,741,2002,4059,4274,5827,7210,8198,12199,14913,15313,15748,16047,17186,19241,19475,21622,27925,28178,30998,35511,
#Partially deleted in new
chr12	113099887	113135738	chr12:113099887-113135738	0	-	113099887	113099887	8553170	19	181,53,121,136,138,173,145,138,113,65,154,118,89,132,82,130,367,57,341,	0,740,2001,4058,4273,5826,7209,8197,14912,15312,15747,16046,17185,19240,19474,21621,27924,30997,35510,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr12	113099891	113135504	chr12:113099891-113135504	0	-	113099891	113099891	8553170	17	177,53,173,499,141,193,113,65,154,118,89,316,130,62,114,57,107,	0,736,5822,7205,8193,12194,14908,15308,15743,16042,17181,19236,21617,27920,28173,30993,35506,
#Partially deleted in new
chr12	113103039	113136239	chr12:113103039-113136239	0	-	113103039	113103039	8553170	20	52,136,138,173,145,138,193,113,65,154,118,89,132,82,130,62,114,57,202,179,	0,906,1121,2674,4057,5045,9046,11760,12160,12595,12894,14033,16088,16322,18469,24772,25025,27845,32358,33021,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	113107215	113135750	chr12:113107215-113135750	0	-	113107215	113107215	8553170	15	380,138,193,113,65,154,118,89,132,82,130,62,114,57,353,	0,869,4870,7584,7984,8419,8718,9857,11912,12146,14293,20596,20849,23669,28182,
#Partially deleted in new
chr12	113115681	113135754	chr12:113115681-113135754	0	-	113115681	113115681	8553170	3	107,118,357,	0,252,19716,
#Partially deleted in new
chr12	113149857	113159276	chr12:113149857-113159276	3	+	113149857	113157679	789624	8	56,106,105,201,222,159,89,576,	0,2060,2925,3350,4556,5402,7744,8843,
#Partially deleted in new
chr12	113152995	113159104	chr12:113152995-113159104	0	+	113152995	113152995	8553170	5	413,222,159,89,404,	0,1418,2264,4606,5705,
#Partially deleted in new
chr12	113153229	113157635	chr12:113153229-113157635	0	+	113153229	113157635	789624	3	179,159,34,	0,2030,4372,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	113156762	113156861	chr12:113156762-113156861	3	-	113156762	113156762	8553170	1	99,	0,
#Partially deleted in new
chr12	113157173	113185479	chr12:113157173-113185479	3	-	113158876	113185451	789624	20	1936,113,105,114,143,219,74,231,135,211,132,62,122,96,42,50,189,71,130,202,	0,4096,4719,5758,5958,6893,8470,8628,12596,15179,17466,17701,17862,19666,19878,21803,21969,22761,23755,28104,
#Partially deleted in new
chr12	113157173	113185479	chr12:113157173-113185479	1	-	113158876	113185451	789624	20	1939,113,105,114,143,219,74,231,135,211,132,62,122,96,42,50,189,71,130,202,	0,4096,4719,5758,5958,6893,8470,8628,12596,15179,17466,17701,17862,19666,19878,21803,21969,22761,23755,28104,
#Partially deleted in new
chr12	113158574	113161490	chr12:113158574-113161490	0	-	113158574	113158574	8553170	2	535,221,	0,2695,
#Partially deleted in new
chr12	113158841	113161456	chr12:113158841-113161456	0	-	113158841	113158841	8553170	2	271,187,	0,2428,
#Deleted in new
chr12	113159112	113159177	chr12:113159112-113159177	3	-	113159112	113159112	5263520	1	65,	0,
#Partially deleted in new
chr12	113161920	113165872	chr12:113161920-113165872	0	-	113161920	113165872	789624	5	77,114,143,74,71,	0,1011,1211,3723,3881,
#Partially deleted in new
chr12	113161950	113165678	chr12:113161950-113165678	0	-	113161950	113161950	8553170	5	47,150,143,219,35,	0,945,1181,2116,3693,
#Deleted in new
chr12	113162717	113164093	chr12:113162717-113164093	0	-	113162717	113162717	8553170	3	328,143,27,	0,414,1349,
#Partially deleted in new
chr12	113174875	113185440	chr12:113174875-113185440	0	-	113179999	113185440	789624	9	61,122,96,42,50,189,71,78,163,	0,160,1964,2176,4101,4267,5059,6105,10402,
#Partially deleted in new
chr12	113175035	113183802	chr12:113175035-113183802	0	-	113175035	113180983	789624	8	122,96,42,50,189,71,130,80,	0,1804,2016,3941,4107,4899,5893,8687,
#Deleted in new
chr12	113176827	113177363	chr12:113176827-113177363	0	-	113176827	113176827	8553170	2	108,312,	0,224,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	113178422	113178519	chr12:113178422-113178519	3	-	113178422	113178422	8553170	1	97,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	113185525	113192368	chr12:113185525-113192368	3	+	113186746	113191817	0	4	496,132,366,1059,	0,659,1157,5784,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	113185525	113192364	chr12:113185525-113192364	1	+	113186746	113191817	0	4	496,124,366,1055,	0,667,1157,5784,
#Partially deleted in new
chr12	113185541	113192361	chr12:113185541-113192361	1	+	113186013	113191817	0	3	480,366,1052,	0,1141,5768,
#Partially deleted in new
chr12	113185623	113192161	chr12:113185623-113192161	3	-	113185623	113185623	8553170	2	179,69,	0,6469,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	113186935	113187304	chr12:113186935-113187304	0	+	113186935	113187052	789624	1	369,	0,
#Partially deleted in new
chr12	113195440	113221094	chr12:113195440-113221094	3	-	113195574	113208166	789624	3	449,822,98,	0,11997,25556,
#Partially deleted in new
chr12	113195442	113221094	chr12:113195442-113221094	1	-	113195574	113208166	789624	5	447,72,234,822,98,	0,2098,5137,11995,25554,
#Partially deleted in new
chr12	113200044	113221027	chr12:113200044-113221027	1	-	113200303	113208166	789624	3	769,1072,31,	0,7393,20952,
#Partially deleted in new
chr12	113221049	113267879	chr12:113221049-113267879	0	+	113221196	113267879	789624	4	187,125,177,37,	0,39318,45130,46793,
#Partially deleted in new
chr12	113221073	113266218	chr12:113221073-113266218	0	+	113221196	113266218	789624	4	163,237,125,39,	0,5654,39294,45106,
#Partially deleted in new
chr12	113221231	113266197	chr12:113221231-113266197	0	+	113226852	113266197	789624	4	147,237,125,18,	0,5496,39136,44948,
#Partially deleted in new
chr12	113221437	113298585	chr12:113221437-113298585	3	+	113226852	113296076	789624	28	189,237,125,177,114,131,89,35,59,100,117,125,49,64,45,57,54,73,108,72,90,116,47,69,85,140,81,2626,	0,5290,38930,44742,46405,47304,48319,51220,51794,52131,55481,55802,56751,57334,58713,63143,63280,64451,65549,66725,67320,68690,69514,70171,70436,71496,71831,74522,
#Partially deleted in new
chr12	113221437	113260402	chr12:113221437-113260402	0	+	113226852	113260402	789624	4	146,237,152,35,	0,5290,24474,38930,
#Partially deleted in new
chr12	113221445	113267955	chr12:113221445-113267955	0	+	113260459	113267955	789624	4	181,125,177,113,	0,38922,44734,46397,
#Partially deleted in new
chr12	113221463	113260402	chr12:113221463-113260402	0	+	113226852	113260402	789624	4	120,237,152,35,	0,5264,24448,38904,
#Partially deleted in new
chr12	113221485	113296129	chr12:113221485-113296129	0	+	113221485	113221485	8553170	27	141,237,125,177,114,131,89,35,59,100,117,125,49,64,45,57,54,73,108,685,116,47,69,85,140,81,170,	0,5242,38882,44694,46357,47256,48271,51172,51746,52083,55433,55754,56703,57286,58665,63095,63232,64403,65501,66677,68642,69466,70123,70388,71448,71783,74474,
#Partially deleted in new
chr12	113244260	113296194	chr12:113244260-113296194	1	+	113260459	113296076	789624	27	101,125,177,114,131,89,35,59,100,117,125,49,64,45,57,54,73,108,72,90,116,47,69,85,140,81,235,	0,16107,21919,23582,24481,25496,28397,28971,29308,32658,32979,33928,34511,35890,40320,40457,41628,42726,43902,44497,45867,46691,47348,47613,48673,49008,51699,
#Partially deleted in new
chr12	113244367	113268777	chr12:113244367-113268777	0	+	113260459	113268777	789624	5	376,125,177,114,36,	0,16000,21812,23475,24374,
#Partially deleted in new
chr12	113244502	113288695	chr12:113244502-113288695	0	+	113244502	113244502	8553170	19	241,125,177,114,131,89,35,59,100,117,125,49,64,45,57,54,73,108,533,	0,15865,21677,23340,24239,25254,28155,28729,29066,32416,32737,33686,34269,35648,40078,40215,41386,42484,43660,
#Deleted in new
chr12	113249465	113250042	chr12:113249465-113250042	3	+	113249465	113249465	8553170	1	577,	0,
#Partially deleted in new
chr12	113260301	113268852	chr12:113260301-113268852	0	+	113260459	113268852	789624	4	191,177,114,111,	0,5878,7541,8440,
#Partially deleted in new
chr12	113276917	113287065	chr12:113276917-113287065	0	+	113276917	113287065	789624	8	118,125,49,64,45,57,73,79,	0,322,1271,1854,3233,7663,8971,10069,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	113277002	113296128	chr12:113277002-113296128	0	+	113277002	113277002	8553170	16	33,125,49,64,45,57,54,73,108,685,116,47,69,1200,81,169,	0,237,1186,1769,3148,7578,7715,8886,9984,11160,13125,13949,14606,14871,16266,18957,
#Partially deleted in new
chr12	113277252	113280314	chr12:113277252-113280314	0	+	113277252	113277252	8553170	4	112,49,64,164,	0,936,1519,2898,
#Partially deleted in new
chr12	113284624	113287404	chr12:113284624-113287404	0	+	113284624	113284624	8553170	4	13,54,73,418,	0,93,1264,2362,
#Partially deleted in new
chr12	113284715	113291623	chr12:113284715-113291623	0	+	113284715	113288498	789624	9	56,73,108,72,32,90,116,47,15,	0,1173,2271,3447,3779,4042,5412,6236,6893,
#Deleted in new
chr12	113290048	113291931	chr12:113290048-113291931	0	+	113290048	113290048	8553170	3	195,47,323,	0,903,1560,
#Deleted in new
chr12	113291522	113291608	chr12:113291522-113291608	3	+	113291522	113291522	5263520	1	86,	0,
#Partially deleted in new
chr12	113293018	113296012	chr12:113293018-113296012	0	+	113293018	113293018	8553170	4	55,81,123,53,	0,250,1087,2941,
#Partially deleted in new
chr12	113298758	113335030	chr12:113298758-113335030	1	-	113299776	113332878	789624	17	1216,65,81,154,122,142,131,60,108,168,106,58,53,153,238,396,38,	0,5562,7736,8932,11475,16576,17767,18183,20205,21572,21822,22091,22297,22437,33964,35684,36234,
#Partially deleted in new
chr12	113298766	113335120	chr12:113298766-113335120	3	-	113299776	113332878	789624	16	1208,65,81,154,122,142,131,60,108,168,106,58,53,153,238,128,	0,5554,7728,8924,11467,16568,17759,18175,20197,21564,21814,22083,22289,22429,33956,36226,
#Partially deleted in new
chr12	113298772	113319325	chr12:113298772-113319325	0	-	113298772	113298772	8553170	9	1202,65,81,154,122,142,99,60,362,	0,5548,7722,8918,11461,16562,17753,18169,20191,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	113298776	113320878	chr12:113298776-113320878	0	-	113302652	113320878	789624	13	1198,561,65,81,154,122,142,131,60,108,168,106,29,	0,3363,5544,7718,8914,11457,16558,17749,18165,20187,21554,21804,22073,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	113298780	113308843	chr12:113298780-113308843	1	-	113299776	113306531	789624	4	1194,65,81,1153,	0,5540,7714,8910,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	113299331	113306844	chr12:113299331-113306844	1	-	113299776	113306663	789624	3	643,65,350,	0,4989,7163,
#Partially deleted in new
chr12	113299776	113332947	chr12:113299776-113332947	1	-	113299776	113332878	789624	14	198,65,81,154,122,142,131,60,108,106,58,53,153,225,	0,4544,6718,7914,10457,15558,16749,17165,19187,20804,21073,21279,21419,32946,
#Partially deleted in new
chr12	113307799	113334833	chr12:113307799-113334833	0	-	113307799	113307799	8553170	12	113,122,142,131,60,108,106,58,53,153,238,391,	0,2434,7535,8726,9142,11164,12781,13050,13256,13396,24923,26643,
#Partially deleted in new
chr12	113315341	113335107	chr12:113315341-113335107	0	-	113315341	113315341	8553170	5	135,131,60,108,115,	0,1184,1600,3622,19651,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	113319973	113335143	chr12:113319973-113335143	0	-	113319973	113319973	8553170	5	934,53,153,212,701,	0,1082,1222,12775,14469,
#Partially deleted in new
chr12	113320330	113335141	chr12:113320330-113335141	0	-	113320330	113332878	789624	7	168,106,58,53,153,238,149,	0,250,519,725,865,12392,14662,
#Partially deleted in new
chr12	113320360	113335122	chr12:113320360-113335122	0	-	113321316	113332878	789624	7	138,106,58,53,153,212,130,	0,220,489,695,835,12388,14632,
#Partially deleted in new
chr12	113320849	113334613	chr12:113320849-113334613	0	-	113321316	113332878	789624	5	58,53,153,212,171,	0,206,346,11899,13593,
#Partially deleted in new
chr12	113320875	113335119	chr12:113320875-113335119	0	-	113320875	113332878	789624	6	32,53,153,238,393,127,	0,180,320,11847,13567,14117,
#Partially deleted in new
chr12	113321195	113359493	chr12:113321195-113359493	0	-	113321195	113332878	789624	3	153,238,164,	0,11527,38134,
#Partially deleted in new
chr12	113334671	113359466	chr12:113334671-113359466	0	-	113334671	113334671	8553170	4	164,269,94,137,	0,3554,19003,24658,
#Partially deleted in new
chr12	113358565	113389238	chr12:113358565-113389238	1	+	113358600	113388626	789624	11	325,94,159,101,215,98,161,72,153,163,780,	0,10550,14083,15908,16227,22179,25539,26646,28371,29178,29893,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	113358569	113391625	chr12:113358569-113391625	3	+	113358600	113388626	789624	12	321,94,159,101,215,98,161,96,72,153,163,3167,	0,10546,14079,15904,16223,22175,25535,26281,26642,28367,29174,29889,
#Partially deleted in new
chr12	113358753	113374860	chr12:113358753-113374860	0	+	113358753	113372670	789624	4	137,159,101,68,	0,13895,15720,16039,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	113374865	113377086	chr12:113374865-113377086	0	+	113374865	113374865	8553170	2	300,298,	0,1923,
#Partially deleted in new
chr12	113392444	113403888	chr12:113392444-113403888	3	-	113392940	113399708	0	8	705,125,228,92,140,40,155,121,	0,1447,4720,6070,6262,6667,7111,11323,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	113396639	113403886	chr12:113396639-113403886	0	-	113396639	113396639	8553170	6	753,92,140,40,155,119,	0,1875,2067,2472,2916,7128,
#Partially deleted in new
chr12	113397254	113403886	chr12:113397254-113403886	0	-	113397254	113399708	789624	3	138,155,119,	0,2301,6513,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	113398514	113426301	chr12:113398514-113426301	0	-	113398514	113426272	789624	6	92,140,40,155,157,152,	0,192,597,1041,27149,27635,
#Partially deleted in new
chr12	113398836	113403886	chr12:113398836-113403886	0	-	113398836	113398836	8553170	3	315,155,119,	0,719,4931,
#Partially deleted in new
chr12	113399254	113403887	chr12:113399254-113403887	0	-	113399254	113399254	8553170	2	456,120,	0,4513,
#Partially deleted in new
chr12	113422236	113438276	chr12:113422236-113438276	3	+	113427982	113438079	0	8	241,195,40,140,89,228,125,391,	0,5725,6183,6923,11897,13092,14514,15649,
#Partially deleted in new
chr12	113422404	113436769	chr12:113422404-113436769	0	+	113428419	113436769	789624	6	73,40,140,89,228,19,	0,6015,6755,11729,12924,14346,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	113422410	113438276	chr12:113422410-113438276	1	+	113427982	113438079	0	9	67,122,195,40,140,89,228,125,391,	0,4719,5551,6009,6749,11723,12918,14340,15475,
#Partially deleted in new
chr12	113422452	113428070	chr12:113422452-113428070	0	+	113427982	113428070	789624	2	435,109,	0,5509,
#Partially deleted in new
chr12	113428418	113438241	chr12:113428418-113438241	0	+	113428418	113438079	789624	5	41,89,228,125,356,	0,5715,6910,8332,9467,
#Partially deleted in new
chr12	113435506	113437109	chr12:113435506-113437109	0	+	113435506	113436883	789624	2	50,359,	0,1244,
#Partially deleted in new
chr12	113462033	113472072	chr12:113462033-113472072	3	-	113463189	113471498	789624	5	1524,166,278,224,747,	0,5222,6093,7088,9292,
#Deleted in new
chr12	113471482	113472280	chr12:113471482-113472280	0	-	113471482	113471482	8553170	2	527,186,	0,612,
#Deleted in new
chr12	113472002	113480624	chr12:113472002-113480624	3	+	113472002	113472002	789624	2	80,442,	0,8180,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	113679458	113773681	chr12:113679458-113773681	3	-	113679458	113679458	8553170	4	282,106,134,67,	0,27412,87616,94156,
#Partially deleted in new
chr12	113737447	113767209	chr12:113737447-113767209	0	-	113737447	113737447	8553170	2	565,135,	0,29627,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	113744576	113773683	chr12:113744576-113773683	1	-	113744576	113744576	789624	2	2019,69,	0,29038,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	113745703	113773663	chr12:113745703-113773663	0	-	113745703	113745703	789624	3	892,134,49,	0,21371,27911,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	113751013	113773639	chr12:113751013-113773639	1	-	113751013	113751013	8553170	4	1175,133,134,25,	0,2417,16061,22601,
#Deleted in new
chr12	113789541	113789807	chr12:113789541-113789807	7	-	113789541	113789541	16724991	1	266,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	113816737	113818179	chr12:113816737-113818179	0	-	113816737	113816737	8553170	2	1188,77,	0,1365,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr12	113816741	113966306	chr12:113816741-113966306	3	-	113823223	113966227	0	25	1445,113,121,106,117,56,80,61,176,130,201,111,97,122,131,204,72,79,81,269,193,39,120,183,115,	0,6467,27926,42049,98227,101650,103869,107955,110312,120265,123218,125582,129086,129612,130592,132091,133341,135770,138389,141040,142470,143123,143317,145490,149450,
#Partially deleted in new
chr12	113822053	113966310	chr12:113822053-113966310	1	-	113823223	113966227	0	25	593,113,121,106,117,56,80,61,176,130,201,111,97,122,131,204,72,79,81,269,193,39,120,183,119,	0,1155,22614,36737,92915,96338,98557,102643,105000,114953,117906,120270,123774,124300,125280,126779,128029,130458,133077,135728,137158,137811,138005,140178,144138,
#Partially deleted in new
chr12	113822056	113966371	chr12:113822056-113966371	1	-	113823223	113966227	0	24	1265,121,106,117,56,80,61,176,130,201,111,97,122,131,204,72,79,81,269,193,39,120,183,180,	0,22611,36734,92912,96335,98554,102640,104997,114950,117903,120267,123771,124297,125277,126776,128026,130455,133074,135725,137155,137808,138002,140175,144135,
#Partially deleted in new
chr12	113822686	113858904	chr12:113822686-113858904	0	-	113823223	113858904	789624	4	121,232,121,114,	0,403,21981,36104,
#Partially deleted in new
chr12	113914968	113927431	chr12:113914968-113927431	0	-	113914968	113914968	8553170	5	117,56,80,61,378,	0,3423,5642,9728,12085,
#Partially deleted in new
chr12	113932568	113937255	chr12:113932568-113937255	3	+	113932568	113932568	8553170	2	161,409,	0,4278,
#Partially deleted in new
chr12	113957862	113966209	chr12:113957862-113966209	0	-	113957862	113957862	8553170	5	188,39,120,183,74,	0,2002,2196,4369,8273,
#Deleted in new
chr12	114077132	114079902	chr12:114077132-114079902	3	+	114077132	114077132	8553170	2	225,334,	0,2436,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	114080380	114113489	chr12:114080380-114113489	0	+	114080380	114080380	8553170	2	70,149,	0,32960,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	114080388	114113489	chr12:114080388-114113489	3	+	114080388	114080388	8553170	4	62,90,81,149,	0,26921,30055,32952,
#Deleted in new
chr12	114097681	114098223	chr12:114097681-114098223	7	+	114097681	114097681	16724991	1	542,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	114104541	114105931	chr12:114104541-114105931	7	+	114104541	114104541	16724991	1	1390,	0,
#Deleted in new
chr12	114238969	114241770	chr12:114238969-114241770	3	-	114238969	114238969	5263520	2	431,43,	0,2758,
#Partially deleted in new
chr12	114353930	114408442	chr12:114353930-114408442	3	-	114355531	114403898	0	9	2176,227,92,153,148,120,95,185,629,	0,12234,31545,40810,44642,45582,47895,49821,53883,
#Partially deleted in new
chr12	114353930	114408387	chr12:114353930-114408387	1	-	114355531	114401917	0	8	2176,227,92,153,148,120,95,574,	0,12234,31545,40810,44642,45582,47895,53883,
#Partially deleted in new
chr12	114355380	114406084	chr12:114355380-114406084	1	-	114355531	114403898	0	9	726,227,92,153,148,120,95,185,457,	0,10784,30095,39360,43192,44132,46445,48371,50247,
#Partially deleted in new
chr12	114366096	114403898	chr12:114366096-114403898	1	-	114366096	114403898	0	7	295,92,153,148,120,95,147,	0,19379,28644,32476,33416,35729,37655,
#Deleted in new
chr12	114394877	114403949	chr12:114394877-114403949	0	-	114394877	114394877	8553170	5	16,148,120,95,198,	0,3695,4635,6948,8874,
#Deleted in new
chr12	114408190	114410012	chr12:114408190-114410012	1	+	114408190	114408190	789624	3	95,180,547,	0,637,1275,
#Deleted in new
chr12	114408195	114409614	chr12:114408195-114409614	0	+	114408195	114408195	8553170	2	812,149,	0,1270,
#Deleted in new
chr12	114408204	114409999	chr12:114408204-114409999	1	+	114408204	114408204	8553170	3	81,151,534,	0,652,1261,
#Deleted in new
chr12	114408753	114412831	chr12:114408753-114412831	3	+	114408753	114408753	8553170	2	254,3366,	0,712,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	114504875	114505187	chr12:114504875-114505187	3	-	114504875	114504875	8553170	1	312,	0,
#Partially deleted in new
chr12	114548853	114549852	chr12:114548853-114549852	7	+	114548853	114548853	16724991	2	102,273,	0,726,
#Deleted in new
chr12	114588193	114588802	chr12:114588193-114588802	7	+	114588193	114588193	16724991	1	609,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	114621760	114622922	chr12:114621760-114622922	3	+	114621760	114621760	8553170	2	251,115,	0,1047,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	114657948	114658062	chr12:114657948-114658062	3	-	114657948	114657948	8553170	1	114,	0,
#Partially deleted in new
chr12	114670253	114684164	chr12:114670253-114684164	3	-	114671840	114683200	0	7	2049,671,158,77,147,268,1353,	0,3911,6059,7326,9251,10625,12558,
#Partially deleted in new
chr12	114670254	114683590	chr12:114670254-114683590	1	-	114671840	114683200	0	8	2048,671,158,77,147,60,268,779,	0,3910,6058,7325,9250,9658,10624,12557,
#Deleted in new
chr12	114677591	114679933	chr12:114677591-114679933	0	-	114677591	114677591	8553170	2	65,429,	0,1913,
#Deleted in new
chr12	114679955	114683434	chr12:114679955-114683434	0	-	114679955	114679955	8553170	2	1191,623,	0,2856,
#Partially deleted in new
chr12	114737703	114737798	chr12:114737703-114737798	3	+	114737703	114737703	8553170	1	95,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	114768673	114771851	chr12:114768673-114771851	3	+	114768673	114768673	8553170	2	120,315,	0,2863,
#Deleted in new
chr12	114894631	114898529	chr12:114894631-114898529	3	-	114894631	114894631	8553170	2	2600,432,	0,3466,
#Partially deleted in new
chr12	114929756	114929935	chr12:114929756-114929935	7	-	114929756	114929756	16724991	1	179,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	115077324	115080153	chr12:115077324-115080153	3	+	115077324	115077324	8553170	2	53,1485,	0,1344,
#Partially deleted in new
chr12	115263169	115270596	chr12:115263169-115270596	3	+	115263169	115263169	8553170	2	152,401,	0,7026,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	115299587	115300708	chr12:115299587-115300708	3	-	115299587	115299587	8553170	1	1121,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	115318656	115320405	chr12:115318656-115320405	3	-	115318656	115318656	8553170	1	1749,	0,
#Deleted in new
chr12	115332145	115332566	chr12:115332145-115332566	3	-	115332145	115332145	8553170	1	421,	0,
#Partially deleted in new
chr12	115363011	115364745	chr12:115363011-115364745	3	+	115363011	115363011	8553170	2	162,681,	0,1053,
#Partially deleted in new
chr12	115569663	115581739	chr12:115569663-115581739	3	+	115569663	115569663	8553170	6	95,220,42,75,105,128,	0,5405,7754,10621,11401,11948,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	115576675	115577615	chr12:115576675-115577615	3	+	115576675	115576675	8553170	2	342,198,	0,742,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	115582060	115601721	chr12:115582060-115601721	1	-	115582060	115582060	8553170	4	116,124,109,67,	0,781,15280,19594,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	115582764	115639734	chr12:115582764-115639734	3	-	115582764	115582764	8553170	4	201,175,78,90,	0,18906,37320,56880,
#Partially deleted in new
chr12	115592603	115592983	chr12:115592603-115592983	7	-	115592603	115592603	16724991	1	380,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	115717724	115718013	chr12:115717724-115718013	3	+	115717724	115717724	8553170	1	289,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	115755261	115799936	chr12:115755261-115799936	3	+	115755261	115755261	8553170	3	129,163,149,	0,10192,44526,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	115810358	115886137	chr12:115810358-115886137	3	-	115810358	115810358	8553170	3	109,233,155,	0,22047,75624,
#Deleted in new
chr12	115852647	115852718	chr12:115852647-115852718	3	-	115852647	115852647	8553170	1	71,	0,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr12	115953871	116277719	chr12:115953871-116277719	3	-	115961265	116277131	789624	31	7527,113,162,158,177,159,143,224,189,220,424,193,224,180,938,206,221,100,125,106,226,732,105,166,189,195,146,84,85,238,660,	0,9535,12210,15068,16722,18206,21299,21643,26878,28512,29245,30308,32394,33237,37148,42604,43138,49131,51997,52434,53539,54529,58925,61237,65352,65906,68584,142797,157556,283596,323188,
#Deleted in new
chr12	115957904	115960532	chr12:115957904-115960532	0	-	115957904	115957904	8553170	2	228,186,	0,2442,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	115958599	115967158	chr12:115958599-115967158	0	-	115958599	115958599	8553170	3	2799,113,1077,	0,4807,7482,
#Partially deleted in new
chr12	115958770	116003939	chr12:115958770-116003939	0	-	115958770	115958770	8553170	18	2628,113,162,158,177,159,143,224,189,220,424,193,224,180,938,206,221,937,	0,4636,7311,10169,11823,13307,16400,16744,21979,23613,24346,25409,27495,28338,32249,37705,38239,44232,
#Partially deleted in new
chr12	115959260	116277174	chr12:115959260-116277174	1	-	115961265	116277131	8553170	31	2138,113,162,158,177,159,179,224,189,220,424,193,224,180,938,206,221,100,125,106,226,732,105,166,189,195,146,84,85,238,115,	0,4146,6821,9679,11333,12817,15910,16254,21489,23123,23856,24919,27005,27848,31759,37215,37749,43742,46608,47045,48150,49140,53536,55848,59963,60517,63195,137408,152167,278207,317799,
#Partially deleted in new
chr12	115959342	116008599	chr12:115959342-116008599	0	-	115961265	116008599	8553170	22	2056,113,162,158,177,159,143,224,189,220,424,193,224,180,938,206,218,100,125,106,226,199,	0,4064,6739,9597,11251,12735,15828,16172,21407,23041,23774,24837,26923,27766,31677,37133,37667,43660,46526,46963,48068,49058,
#Partially deleted in new
chr12	115959363	116096911	chr12:115959363-116096911	0	-	115959363	115959363	8553170	28	2035,113,162,158,177,159,143,224,189,220,424,193,224,180,938,206,221,100,125,106,226,732,105,166,189,195,146,243,	0,4043,6718,9576,11230,12714,15807,16151,21386,23020,23753,24816,26902,27745,31656,37112,37646,43639,46505,46942,48047,49037,53433,55745,59860,60414,63092,137305,
#Partially deleted in new
chr12	115959377	115991450	chr12:115959377-115991450	0	-	115982561	115991450	8553170	14	2021,113,162,177,159,143,224,189,212,424,193,224,180,431,	0,4029,6704,11216,12700,15793,16137,21372,23006,23739,24802,26888,27731,31642,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	115959605	115991693	chr12:115959605-115991693	0	-	115959605	115959605	8553170	14	1793,113,162,158,177,159,143,224,1854,424,193,224,180,674,	0,3801,6476,9334,10988,12472,15565,15909,21144,23511,24574,26660,27503,31414,
#Partially deleted in new
chr12	115959615	115963549	chr12:115959615-115963549	0	-	115959615	115959615	8553170	2	1783,143,	0,3791,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	115959862	115974181	chr12:115959862-115974181	0	-	115959862	115959862	8553170	6	1536,113,162,158,177,2104,	0,3544,6219,9077,10731,12215,
#Partially deleted in new
chr12	115961186	115962733	chr12:115961186-115962733	3	+	115961186	115961186	8553170	2	399,102,	0,1445,
#Partially deleted in new
chr12	115961189	116006348	chr12:115961189-116006348	0	-	115961189	115961189	8553170	19	209,113,162,158,177,159,143,224,189,220,424,193,224,180,938,206,221,100,480,	0,2217,4892,7750,9404,10888,13981,14325,19560,21194,21927,22990,25076,25919,29830,35286,35820,41813,44679,
#Partially deleted in new
chr12	115970759	115980902	chr12:115970759-115980902	0	-	115970759	115970759	8553170	4	11,159,568,153,	0,1318,4411,9990,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	115978326	115981304	chr12:115978326-115981304	0	-	115978326	115978326	8553170	1	2978,	0,
#Partially deleted in new
chr12	115980480	115982590	chr12:115980480-115982590	0	-	115980480	115980480	8553170	2	458,207,	0,1903,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr12	115981303	116022508	chr12:115981303-116022508	0	-	115982350	116022508	789624	18	1300,424,193,224,180,938,206,221,100,125,106,226,732,105,166,189,195,53,	0,1813,2876,4962,5805,9716,15172,15706,21699,24565,25002,26107,27097,31493,33805,37920,38474,41152,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	115981564	115985440	chr12:115981564-115985440	0	-	115981564	115981564	8553170	2	1976,1261,	0,2615,
#Deleted in new
chr12	115983519	115988579	chr12:115983519-115988579	0	-	115983519	115983519	8553170	3	21,193,2314,	0,660,2746,
#Partially deleted in new
chr12	115991679	116276759	chr12:115991679-116276759	0	-	115991679	116276471	789624	17	278,206,221,100,125,106,226,732,105,166,189,195,146,84,85,238,330,	0,4796,5330,11323,14189,14626,15731,16721,21117,23429,27544,28098,30776,104989,119748,245788,284750,
#Partially deleted in new
chr12	115991695	116007444	chr12:115991695-116007444	0	-	115991695	115991695	8553170	6	262,206,221,100,125,1139,	0,4780,5314,11307,14173,14610,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	115995520	116000172	chr12:115995520-116000172	0	-	115995520	115995520	8553170	2	1161,3163,	0,1489,
#Deleted in new
chr12	116003497	116007665	chr12:116003497-116007665	0	-	116003497	116003497	8553170	2	2496,1360,	0,2808,
#Deleted in new
chr12	116003539	116009015	chr12:116003539-116009015	0	-	116003539	116003539	8553170	2	4097,615,	0,4861,
#Deleted in new
chr12	116006806	116009145	chr12:116006806-116009145	0	-	116006806	116006806	8553170	1	2339,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	116007459	116010972	chr12:116007459-116010972	0	-	116007459	116007459	8553170	2	177,2572,	0,941,
#Partially deleted in new
chr12	116009007	116237687	chr12:116009007-116237687	0	-	116009007	116237687	8553170	9	125,102,166,189,195,146,84,85,220,	0,3789,6101,10216,10770,13448,87661,102420,228460,
#Deleted in new
chr12	116082569	116082676	chr12:116082569-116082676	3	+	116082569	116082569	8553170	1	107,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	116109619	116277081	chr12:116109619-116277081	0	-	116110099	116277081	8553170	4	640,85,238,22,	0,1808,127848,167440,
#Partially deleted in new
chr12	116148559	116148654	chr12:116148559-116148654	3	-	116148559	116148559	5263520	1	95,	0,
#Deleted in new
chr12	116169044	116169258	chr12:116169044-116169258	7	+	116169044	116169044	16724991	1	214,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	116174501	116181295	chr12:116174501-116181295	3	-	116174501	116174501	8553170	2	371,122,	0,6672,
#Partially deleted in new
chr12	116230432	116237569	chr12:116230432-116237569	0	-	116230432	116230432	8553170	3	100,70,102,	0,6388,7035,
#Partially deleted in new
chr12	116230432	116237569	chr12:116230432-116237569	0	-	116230432	116230432	8553170	2	100,102,	0,7035,
#Partially deleted in new
chr12	116230532	116237569	chr12:116230532-116237569	0	-	116230532	116230532	8553170	4	90,98,70,102,	0,1526,6288,6935,
#Partially deleted in new
chr12	116230532	116237569	chr12:116230532-116237569	0	-	116230532	116230532	8553170	3	90,70,102,	0,6288,6935,
#Partially deleted in new
chr12	116237498	116276295	chr12:116237498-116276295	0	-	116237498	116237498	8553170	2	207,234,	0,38563,
#Partially deleted in new
chr12	116368763	116389471	chr12:116368763-116389471	3	+	116368763	116368763	8553170	5	74,150,179,116,81,	0,12765,15579,16532,20627,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	116428251	116428318	chr12:116428251-116428318	3	-	116428251	116428251	5263520	1	67,	0,
#Deleted in new
chr12	116517857	116518820	chr12:116517857-116518820	3	+	116517857	116517857	8553170	2	33,563,	0,400,
#Partially deleted in new
chr12	116533421	116535521	chr12:116533421-116535521	1	+	116533421	116533421	789624	2	41,1556,	0,544,
#Partially deleted in new
chr12	116533434	116536513	chr12:116533434-116536513	3	+	116533434	116533434	789624	3	182,92,161,	0,2685,2918,
#Partially deleted in new
chr12	116533467	116534359	chr12:116533467-116534359	0	+	116533467	116533467	8553170	2	149,394,	0,498,
#Partially deleted in new
chr12	116536063	116536518	chr12:116536063-116536518	0	+	116536063	116536063	8553170	2	148,166,	0,289,
#Partially deleted in new
chr12	116548104	116550441	chr12:116548104-116550441	0	+	116548104	116548104	8553170	2	184,67,	0,2270,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	116548105	116554381	chr12:116548105-116554381	0	+	116548105	116548105	8553170	4	183,404,58,87,	0,2265,3009,6189,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	116550741	116560083	chr12:116550741-116560083	0	+	116550741	116550741	8553170	5	33,58,131,176,207,	0,373,3553,8516,9135,
#Partially deleted in new
chr12	116559380	116576448	chr12:116559380-116576448	3	+	116575942	116576320	789624	2	53,607,	0,16461,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	116580973	116583672	chr12:116580973-116583672	3	+	116580973	116580973	8553170	1	2699,	0,
#Partially deleted in new
chr12	116599269	116603585	chr12:116599269-116603585	3	+	116599269	116599269	8553170	2	398,88,	0,4228,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	116661581	116698065	chr12:116661581-116698065	3	+	116661581	116661581	8553170	2	665,211,	0,36273,
#Partially deleted in new
chr12	116698335	116703130	chr12:116698335-116703130	3	+	116698335	116698335	8553170	2	28,338,	0,4457,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	116710184	116738061	chr12:116710184-116738061	3	-	116717809	116737900	789624	5	7709,114,152,157,272,	0,9578,10111,12882,27605,
#Partially deleted in new
chr12	116717069	116738070	chr12:116717069-116738070	0	-	116720414	116737900	789624	4	824,114,152,281,	0,2693,3226,20720,
#Deleted in new
chr12	116717335	116720127	chr12:116717335-116720127	1	-	116717809	116719819	789624	2	558,365,	0,2427,
#Partially deleted in new
chr12	116717448	116737836	chr12:116717448-116737836	0	-	116717809	116737836	789624	2	445,47,	0,20341,
#Deleted in new
chr12	116738177	116738694	chr12:116738177-116738694	0	+	116738177	116738177	8553170	2	193,222,	0,295,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	116738290	116851762	chr12:116738290-116851762	1	+	116740497	116849448	789624	11	80,177,59,467,77,101,154,150,66,102,2449,	0,2054,2745,11550,15693,28523,40904,95501,97669,97890,111023,
#Partially deleted in new
chr12	116738290	116853629	chr12:116738290-116853629	3	+	116740497	116849448	789624	12	80,177,59,467,77,101,154,150,66,102,171,1292,	0,2054,2745,11550,15693,28523,40904,95501,97669,97890,111023,114047,
#Partially deleted in new
chr12	116738290	116853631	chr12:116738290-116853631	1	+	116740497	116852712	789624	11	80,177,59,467,77,101,154,150,66,102,982,	0,2054,2745,11550,15693,28523,40904,95501,97669,97890,114359,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	116738310	116852945	chr12:116738310-116852945	1	+	116740497	116851944	789624	7	60,177,59,467,77,86,1254,	0,2034,2725,11530,15673,28503,113381,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	116738310	116852941	chr12:116738310-116852941	1	+	116750027	116851944	789624	7	60,177,59,467,77,87,1249,	0,2034,2725,11530,15673,28503,113382,
#Partially deleted in new
chr12	116738315	116740839	chr12:116738315-116740839	0	+	116738315	116738315	8553170	2	55,495,	0,2029,
#Partially deleted in new
chr12	116738337	116852941	chr12:116738337-116852941	0	+	116740497	116748704	789624	12	33,177,59,83,467,77,101,154,150,66,102,292,	0,2007,2698,10324,11503,15646,28476,40857,95454,97622,97843,114312,
#Partially deleted in new
chr12	116755394	116755874	chr12:116755394-116755874	7	-	116755394	116755394	16724991	1	480,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	116782104	116782208	chr12:116782104-116782208	3	+	116782104	116782104	8553170	1	104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	116801022	116801477	chr12:116801022-116801477	3	+	116801022	116801022	8553170	1	455,	0,
#Partially deleted in new
chr12	116835996	116852945	chr12:116835996-116852945	0	+	116835996	116835996	8553170	3	29,102,608,	0,184,16341,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	116856143	116881441	chr12:116856143-116881441	3	-	116881031	116881307	0	2	5323,466,	0,24832,
#Partially deleted in new
chr12	116861126	116879617	chr12:116861126-116879617	0	-	116861126	116861126	8553170	2	340,545,	0,17946,
#Partially deleted in new
chr12	116861332	116881088	chr12:116861332-116881088	0	-	116881031	116881088	789624	5	134,143,110,87,113,	0,6316,15358,17125,19643,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	116869476	116878497	chr12:116869476-116878497	0	-	116869476	116869476	8553170	3	179,110,40,	0,7214,8981,
#Deleted in new
chr12	116908311	116908627	chr12:116908311-116908627	7	+	116908311	116908311	16724991	1	316,	0,
#Partially deleted in new
chr12	116910955	117028636	chr12:116910955-117028636	3	+	116911037	117028172	789624	11	400,105,165,89,158,197,207,128,174,111,609,	0,17067,34408,38662,53741,74250,77707,99367,113191,116438,117072,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	116910964	117031148	chr12:116910964-117031148	1	+	116911037	117028172	789624	11	193,105,165,89,158,197,207,128,174,111,3121,	0,17058,34399,38653,53732,74241,77698,99358,113182,116429,117063,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	116948737	116951422	chr12:116948737-116951422	3	-	116948737	116948737	8553170	1	2685,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	116977441	116987337	chr12:116977441-116987337	3	-	116977441	116977441	789624	4	2148,170,194,1684,	0,2808,7741,8212,
#Partially deleted in new
chr12	116978066	116985404	chr12:116978066-116985404	0	+	116978066	116978066	8553170	2	312,199,	0,7139,
#Deleted in new
chr12	117002462	117003152	chr12:117002462-117003152	3	+	117002462	117002462	8553170	1	690,	0,
#Partially deleted in new
chr12	117038922	117099479	chr12:117038922-117099479	0	-	117046590	117099282	789624	8	288,48,108,67,140,81,70,255,	0,3024,7636,7849,10096,17883,36348,60302,
#Partially deleted in new
chr12	117038923	117099469	chr12:117038923-117099469	3	-	117039132	117099282	789624	8	287,48,108,62,140,81,70,245,	0,3023,7635,7853,10095,17882,36347,60301,
#Partially deleted in new
chr12	117038924	117099446	chr12:117038924-117099446	1	-	117039132	117099282	789624	7	286,48,108,62,140,70,222,	0,3022,7634,7852,10094,36346,60300,
#Partially deleted in new
chr12	117038956	117046831	chr12:117038956-117046831	0	-	117039132	117046831	789624	3	254,108,60,	0,7602,7815,
#Partially deleted in new
chr12	117046479	117099408	chr12:117046479-117099408	0	-	117048751	117099282	789624	7	187,62,130,140,81,70,184,	0,297,2201,2539,10326,28791,52745,
#Partially deleted in new
chr12	117046568	117053995	chr12:117046568-117053995	0	-	117046568	117046568	8553170	4	98,62,140,67,	0,208,2450,7360,
#Partially deleted in new
chr12	117075296	117098655	chr12:117075296-117098655	0	-	117075296	117075296	8553170	2	44,263,	0,23096,
#Partially deleted in new
chr12	117099480	117142091	chr12:117099480-117142091	3	+	117099480	117099480	789624	3	164,188,701,	0,972,41910,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	117141987	117190531	chr12:117141987-117190531	1	-	117146086	117190456	789624	12	4290,158,191,133,180,137,137,147,122,95,136,314,	0,13803,15885,23497,24910,30483,32217,32663,35532,44489,47239,48230,
#Partially deleted in new
chr12	117143780	117190471	chr12:117143780-117190471	1	-	117146086	117189349	789624	13	2497,158,191,133,180,137,137,147,122,95,136,60,145,	0,12010,14092,21704,23117,28690,30424,30870,33739,42696,45446,46437,46546,
#Partially deleted in new
chr12	117145048	117190286	chr12:117145048-117190286	0	-	117146086	117190286	789624	11	1229,158,191,133,137,137,147,122,95,136,69,	0,10742,12824,20436,27422,29156,29602,32471,41428,44178,45169,
#Partially deleted in new
chr12	117145067	117190456	chr12:117145067-117190456	3	-	117146086	117190456	789624	12	1210,158,212,133,180,137,137,147,122,95,136,239,	0,10723,12805,20417,21830,27403,29137,29583,32452,41409,44159,45150,
#Partially deleted in new
chr12	117154249	117158028	chr12:117154249-117158028	0	-	117154249	117154249	8553170	3	53,158,156,	0,1541,3623,
#Partially deleted in new
chr12	117155053	117167046	chr12:117155053-117167046	0	-	117155589	117167046	789624	5	562,158,212,133,149,	0,737,2819,10431,11844,
#Partially deleted in new
chr12	117172509	117189031	chr12:117172509-117189031	0	-	117172509	117172509	8553170	6	98,137,143,122,95,273,	0,1695,2145,5010,13967,16249,
#Partially deleted in new
chr12	117186476	117190470	chr12:117186476-117190470	0	-	117186476	117186476	8553170	4	95,35,136,253,	0,2282,2750,3741,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr12	117208141	117361777	chr12:117208141-117361777	3	-	117215308	117331069	0	29	7183,119,195,149,122,88,211,170,194,79,139,175,117,59,105,145,86,195,102,175,140,142,92,163,146,129,127,1145,266,	0,9904,11933,14573,16874,18541,19289,23820,26423,34485,35155,39206,45496,50255,50884,52323,55747,57174,59901,64243,69817,72583,77099,77962,79932,82156,103324,122203,153370,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr12	117208143	117361802	chr12:117208143-117361802	1	-	117215308	117331069	0	30	7181,119,195,149,122,88,211,170,194,79,139,175,117,102,59,105,145,86,195,102,175,140,142,92,163,146,129,127,1145,291,	0,9902,11931,14571,16872,18539,19287,23818,26421,34483,35153,39204,45494,47792,50253,50882,52321,55745,57172,59899,64241,69815,72581,77097,77960,79930,82154,103322,122201,153368,
#Partially deleted in new
chr12	117215258	117331074	chr12:117215258-117331074	1	-	117215308	117331069	0	29	66,119,195,149,122,88,211,170,194,79,139,175,117,102,59,105,145,86,195,102,175,140,142,92,163,146,129,127,730,	0,2787,4816,7456,9757,11424,12172,16703,19306,27368,28038,32089,38379,40677,43138,43767,45206,48630,50057,52784,57126,62700,65466,69982,70845,72815,75039,96207,115086,
#Partially deleted in new
chr12	117215280	117331079	chr12:117215280-117331079	1	-	117215308	117331069	789624	31	44,119,195,149,122,88,211,170,194,79,139,175,117,59,105,145,86,195,102,175,140,142,92,163,146,129,127,173,15,3,541,	0,2765,4794,7434,9735,11402,12150,16681,19284,27346,28016,32067,38357,43116,43745,45184,48608,50035,52762,57104,62678,65444,69960,70823,72793,75017,96185,115064,115238,115254,115258,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	117245550	117246164	chr12:117245550-117246164	7	-	117245550	117245550	16724991	2	94,230,	0,384,
#Partially deleted in new
chr12	117331432	117452170	chr12:117331432-117452170	0	-	117331432	117331432	8553170	2	57,470,	0,120268,
#Partially deleted in new
chr12	117348034	117361629	chr12:117348034-117361629	0	-	117348034	117348034	8553170	2	358,118,	0,13477,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr12	117453011	117968223	chr12:117453011-117968223	1	-	117467198	117968168	789624	20	14194,134,130,132,134,97,368,49,73,42,169,125,68,84,70,185,514,151,141,148,	0,16650,18179,23452,31404,32583,71840,74059,77929,78654,86707,102157,105494,126107,129278,214462,307999,402416,407279,515064,
#Deleted in new
chr12	117453011	117456986	chr12:117453011-117456986	3	+	117453011	117453011	8553170	2	484,78,	0,3897,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr12	117453053	117968983	chr12:117453053-117968983	3	-	117467198	117968255	0	20	14152,134,130,132,134,97,368,49,73,42,169,125,68,84,70,185,514,151,141,908,	0,16608,18137,23410,31362,32541,71798,74017,77887,78612,86665,102115,105452,126065,129236,214420,307957,402374,407237,515022,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	117517705	117677251	chr12:117517705-117677251	0	-	117517705	117517705	8553170	13	147,368,49,73,42,169,125,68,84,70,185,74,58,	0,7146,9365,13235,13960,22013,37463,40800,61413,64584,149768,156577,159488,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	117539471	117555229	chr12:117539471-117555229	0	-	117539471	117539471	8553170	2	416,61,	0,15697,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	117889453	117891008	chr12:117889453-117891008	3	+	117889453	117889453	8553170	2	285,263,	0,1292,
#Partially deleted in new
chr12	118013587	118024981	chr12:118013587-118024981	0	+	118019756	118024981	789624	6	85,65,137,80,74,131,	0,5484,6044,7318,8698,11263,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	118016700	118024996	chr12:118016700-118024996	0	+	118019756	118024996	789624	7	192,126,65,137,80,74,146,	0,989,2371,2931,4205,5585,8150,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	118016703	118022314	chr12:118016703-118022314	0	+	118018051	118022314	789624	6	189,59,65,137,80,29,	0,1291,2368,2928,4202,5582,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	118016703	118020960	chr12:118016703-118020960	0	+	118017713	118020960	789624	6	189,126,59,65,137,55,	0,986,1291,2368,2928,4202,
#Partially deleted in new
chr12	118016709	118031792	chr12:118016709-118031792	3	+	118016827	118031278	0	11	183,65,137,80,74,160,82,130,78,55,611,	0,2362,2922,4196,5576,8141,9037,10179,11243,13061,14472,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	118016721	118032234	chr12:118016721-118032234	1	+	118018051	118031278	0	12	171,364,65,137,80,74,160,82,130,78,55,1053,	0,968,2350,2910,4184,5564,8129,9025,10167,11231,13049,14460,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	118016728	118019754	chr12:118016728-118019754	0	+	118018051	118019754	789624	5	164,163,59,65,123,	0,961,1266,2343,2903,
#Partially deleted in new
chr12	118024816	118025518	chr12:118024816-118025518	3	-	118024816	118024816	8553170	1	702,	0,
#Partially deleted in new
chr12	118024915	118027392	chr12:118024915-118027392	0	+	118024915	118024915	8553170	3	95,82,504,	0,831,1973,
#Partially deleted in new
chr12	118026889	118033130	chr12:118026889-118033130	0	+	118026889	118026889	8553170	6	129,78,55,479,134,186,	0,1063,2881,4292,5595,6055,
#Duplicated in new
chr12	118032693	118061211	chr12:118032693-118061211	1	-	118034195	118038317	789624	7	1665,108,111,173,101,169,176,	0,2292,2520,3644,5594,19616,28342,
#Partially deleted in new
chr12	118032906	118061190	chr12:118032906-118061190	3	-	118034195	118061048	789624	9	1452,108,111,173,101,132,245,169,155,	0,2079,2307,3431,5381,9934,10226,19403,28129,
#Partially deleted in new
chr12	118034120	118062174	chr12:118034120-118062174	1	-	118034195	118062162	789624	9	238,108,111,173,101,132,245,169,76,	0,865,1093,2217,4167,8720,9012,18189,27978,
#Partially deleted in new
chr12	118034164	118061114	chr12:118034164-118061114	0	-	118038384	118061048	789624	7	194,108,111,173,101,169,79,	0,821,1049,2173,4123,18145,26871,
#Partially deleted in new
chr12	118034195	118052604	chr12:118034195-118052604	1	-	118034195	118052497	789624	8	163,108,111,173,101,132,245,295,	0,790,1018,2142,4092,8645,8937,18114,
#Partially deleted in new
chr12	118034674	118061089	chr12:118034674-118061089	0	-	118034674	118034674	8553170	7	650,173,101,132,245,169,54,	0,1663,3613,8166,8458,17635,26361,
#Partially deleted in new
chr12	118035076	118042878	chr12:118035076-118042878	0	-	118035309	118038317	789624	5	17,111,126,101,38,	0,137,1308,3211,7764,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	118035697	118036384	chr12:118035697-118036384	0	-	118035697	118035697	8553170	1	687,	0,
#Partially deleted in new
chr12	118036337	118061140	chr12:118036337-118061140	0	-	118036337	118036337	8553170	5	173,132,245,169,105,	0,6503,6795,15972,24698,
#Partially deleted in new
chr12	118036440	118062410	chr12:118036440-118062410	0	-	118036440	118052497	789624	6	70,101,132,245,189,58,	0,1847,6400,6692,15869,25912,
#Deleted in new
chr12	118037868	118038081	chr12:118037868-118038081	3	+	118037868	118037868	8553170	1	213,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	118042455	118061112	chr12:118042455-118061112	0	-	118042455	118042455	8553170	4	517,245,169,77,	0,677,9854,18580,
#Partially deleted in new
chr12	118042877	118062430	chr12:118042877-118062430	0	-	118042877	118042877	8553170	4	95,245,169,78,	0,255,9432,19475,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	118063592	118103948	chr12:118063592-118103948	3	-	118066638	118103671	789624	9	3102,221,16,111,294,261,303,282,356,	0,4784,7459,7766,10106,15753,18534,31940,40000,
#Partially deleted in new
chr12	118066397	118066725	chr12:118066397-118066725	3	+	118066397	118066397	8553170	1	328,	0,
#Partially deleted in new
chr12	118070952	118073741	chr12:118070952-118073741	0	-	118070952	118070952	8553170	2	517,43,	0,2746,
#Partially deleted in new
chr12	118079398	118103904	chr12:118079398-118103904	0	-	118079398	118103671	789624	3	208,282,312,	0,16134,24194,
#Partially deleted in new
chr12	118079453	118082278	chr12:118079453-118082278	0	-	118079453	118079453	8553170	2	153,127,	0,2698,
#Partially deleted in new
chr12	118082277	118104000	chr12:118082277-118104000	0	-	118082277	118082277	8553170	4	152,282,182,408,	0,13255,20711,21315,
#Partially deleted in new
chr12	118095545	118103862	chr12:118095545-118103862	0	-	118095545	118095545	8553170	3	133,182,270,	0,7443,8047,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	118095621	118135948	chr12:118095621-118135948	0	-	118095621	118095621	8553170	4	193,183,104,92,	0,30859,40017,40235,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	118101604	118103885	chr12:118101604-118103885	0	-	118101604	118101604	8553170	2	1572,293,	0,1988,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	118101899	118103056	chr12:118101899-118103056	0	-	118101899	118101899	8553170	2	368,68,	0,1089,
#Deleted in new
chr12	118102838	118103990	chr12:118102838-118103990	0	-	118102838	118102838	8553170	2	332,398,	0,754,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	118114349	118121117	chr12:118114349-118121117	0	-	118114349	118114349	8553170	4	63,4,234,89,	0,2686,3299,6679,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	118117045	118117463	chr12:118117045-118117463	0	-	118117045	118117045	8553170	1	418,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	118117666	118136026	chr12:118117666-118136026	0	-	118117666	118117666	8553170	4	216,118,190,170,	0,3834,8814,18190,
#Partially deleted in new
chr12	118135857	118145584	chr12:118135857-118145584	3	+	118136209	118144803	0	4	487,110,101,999,	0,2181,3593,8728,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	118139016	118145109	chr12:118139016-118145109	0	+	118139016	118139016	8553170	3	83,101,524,	0,434,5569,
#Partially deleted in new
chr12	118149800	118372945	chr12:118149800-118372945	3	-	118150996	118255567	789624	21	1358,183,213,240,204,129,237,135,207,168,82,94,92,114,97,46,102,72,208,105,298,	0,2426,10345,11987,22656,27400,31570,40006,49250,51495,63113,64216,83873,85757,88272,89426,93614,95093,105647,116854,222847,
#Partially deleted in new
chr12	118149800	118359720	chr12:118149800-118359720	1	-	118150996	118255567	789624	21	1358,183,213,240,204,129,237,135,207,168,82,94,92,114,97,46,102,72,208,105,215,	0,2426,10345,11987,22656,27400,31570,40006,49250,51495,63113,64216,83873,85757,88272,89426,93614,95093,105647,116854,209705,
#Partially deleted in new
chr12	118149941	118160358	chr12:118149941-118160358	0	-	118149941	118149941	8553170	4	136,65,183,213,	0,1152,2285,10204,
#Partially deleted in new
chr12	118150442	118243490	chr12:118150442-118243490	0	-	118150442	118150442	8553170	18	716,183,213,240,204,129,237,135,207,168,82,94,92,114,899,97,46,76,	0,1784,9703,11345,22014,26758,30928,39364,48608,50853,62471,63574,83231,85115,85352,87630,88784,92972,
#Deleted in new
chr12	118150908	118152753	chr12:118150908-118152753	1	-	118150996	118152346	789624	2	250,527,	0,1318,
#Partially deleted in new
chr12	118150956	118190545	chr12:118150956-118190545	1	-	118150996	118181556	789624	8	202,183,213,240,204,129,237,739,	0,1270,9189,10831,21500,26244,30414,38850,
#Deleted in new
chr12	118159775	118161879	chr12:118159775-118161879	0	-	118159775	118159775	8553170	2	583,92,	0,2012,
#Partially deleted in new
chr12	118181441	118190522	chr12:118181441-118190522	0	-	118181441	118181556	789624	3	166,135,279,	0,8365,8802,
#Partially deleted in new
chr12	118181514	118190551	chr12:118181514-118190551	0	-	118181514	118181556	789624	3	93,135,369,	0,8292,8668,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	118198389	118214171	chr12:118198389-118214171	0	-	118198389	118198389	8553170	2	3074,155,	0,15627,
#Partially deleted in new
chr12	118201421	118243448	chr12:118201421-118243448	0	-	118201421	118243448	789624	7	42,82,94,92,114,97,34,	0,11492,12595,32252,34136,36651,41993,
#Partially deleted in new
chr12	118243429	118359105	chr12:118243429-118359105	0	-	118243429	118255567	789624	6	87,72,208,105,222,187,	0,1464,12018,23225,53512,115489,
#Partially deleted in new
chr12	118244900	118359720	chr12:118244900-118359720	0	-	118244900	118255567	789624	4	65,208,105,200,	0,10547,21754,114620,
#Partially deleted in new
chr12	118244913	118359166	chr12:118244913-118359166	0	-	118244913	118255567	789624	4	52,208,105,248,	0,10534,21741,114005,
#Deleted in new
chr12	118246083	118246962	chr12:118246083-118246962	7	+	118246083	118246083	16724991	1	879,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	118255503	118359676	chr12:118255503-118359676	0	-	118255503	118255567	789624	4	152,177,105,156,	0,5993,11151,104017,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	118255511	118359121	chr12:118255511-118359121	0	-	118255511	118255567	789624	4	144,105,142,203,	0,11143,39728,103407,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	118255595	118372893	chr12:118255595-118372893	0	-	118255595	118255595	8553170	4	60,177,105,246,	0,5901,11059,117052,
#Deleted in new
chr12	118375349	118376275	chr12:118375349-118376275	3	-	118375349	118375349	8553170	2	442,169,	0,757,
#Partially deleted in new
chr12	118376379	118418031	chr12:118376379-118418031	3	+	118376691	118414433	789624	12	454,70,56,72,20,157,96,62,22,106,85,3697,	0,3782,7632,9734,13547,14746,24279,25379,25603,27032,34693,37955,
#Partially deleted in new
chr12	118401771	118414655	chr12:118401771-118414655	0	+	118401771	118401771	8553170	4	49,106,85,321,	0,1640,9301,12563,
#Partially deleted in new
chr12	118402232	118414386	chr12:118402232-118414386	0	+	118402232	118402232	8553170	4	416,106,85,52,	0,1179,8840,12102,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	118403500	118411147	chr12:118403500-118411147	0	+	118403500	118403500	8553170	3	17,418,75,	0,555,7572,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	118428280	118428870	chr12:118428280-118428870	3	+	118428280	118428280	8553170	1	590,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	118430146	118430699	chr12:118430146-118430699	3	+	118430146	118430146	8553170	1	553,	0,
#Duplicated in new
chr12	118645314	118648724	chr12:118645314-118648724	3	-	118645314	118645314	8553170	3	215,80,241,	0,2560,3169,
#Deleted in new
chr12	118737963	118738511	chr12:118737963-118738511	7	-	118737963	118737963	16724991	1	548,	0,
#Partially deleted in new
chr12	118758753	118761679	chr12:118758753-118761679	3	-	118758753	118758753	789624	3	278,94,88,	0,1220,2838,
#Partially deleted in new
chr12	118758804	118761657	chr12:118758804-118761657	0	-	118758804	118758804	789624	2	227,66,	0,2787,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	118773031	118775137	chr12:118773031-118775137	3	-	118773031	118773031	8553170	4	271,165,33,211,	0,579,1454,1895,
#Partially deleted in new
chr12	118818803	118833536	chr12:118818803-118833536	3	-	118818803	118818803	789624	3	218,82,150,	0,14158,14583,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	118829680	118829805	chr12:118829680-118829805	7	+	118829680	118829680	16724991	1	125,	0,
#Partially deleted in new
chr12	118849353	118908930	chr12:118849353-118908930	3	-	118849353	118849353	8553170	5	123,191,68,93,95,	0,14770,18242,42035,59482,
#Partially deleted in new
chr12	118888433	118888564	chr12:118888433-118888564	3	-	118888433	118888433	8553170	1	131,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	118981494	119163051	chr12:118981494-119163051	3	+	118981882	119156798	789624	13	519,147,87,72,27,51,99,157,305,204,111,141,6557,	0,120741,132783,135442,138755,140575,143886,149183,163886,169522,172044,172748,175000,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	118989726	119001840	chr12:118989726-119001840	3	+	118989726	118989726	8553170	5	245,83,135,195,190,	0,2000,2416,11400,11924,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	118993856	118994159	chr12:118993856-118994159	3	+	118993856	118993856	8553170	1	303,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	119000775	119001842	chr12:119000775-119001842	0	+	119000775	119000775	8553170	3	68,195,192,	0,351,875,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	119031038	119116961	chr12:119031038-119116961	3	-	119031038	119031038	8553170	4	284,183,65,75,	0,5746,38576,85848,
#Partially deleted in new
chr12	119114094	119130749	chr12:119114094-119130749	0	+	119114094	119114094	8553170	7	53,87,72,27,51,99,72,	0,183,2842,6155,7975,11286,16583,
#Partially deleted in new
chr12	119124248	119133163	chr12:119124248-119133163	0	+	119124248	119124248	8553170	5	83,99,157,62,160,	0,1132,6429,8050,8755,
#Partially deleted in new
chr12	119130677	119151220	chr12:119130677-119151220	0	+	119130677	119145406	789624	4	157,16,305,204,	0,13861,14703,20339,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	119174064	119176484	chr12:119174064-119176484	3	-	119174064	119174064	789624	2	499,78,	0,2342,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	119178641	119194748	chr12:119178641-119194748	3	+	119179312	119193858	789624	3	1038,64,1050,	0,8383,15057,
#Partially deleted in new
chr12	119179589	119221131	chr12:119179589-119221131	0	+	119179589	119220952	789624	4	90,64,65,418,	0,7435,34087,41124,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	119182047	119183259	chr12:119182047-119183259	3	-	119182047	119182047	8553170	2	155,386,	0,826,
#Partially deleted in new
chr12	119186799	119193828	chr12:119186799-119193828	0	+	119186799	119186799	8553170	2	289,130,	0,6899,
#Deleted in new
chr12	119194849	119195394	chr12:119194849-119195394	7	+	119194849	119194849	16724991	1	545,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	119225833	119259017	chr12:119225833-119259017	3	-	119225833	119225833	8553170	5	30,161,137,104,69,	0,553,10790,11079,33115,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	119283824	119303380	chr12:119283824-119303380	3	-	119283824	119283824	789624	4	857,965,423,46,	0,947,17784,19510,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	119284256	119285118	chr12:119284256-119285118	0	-	119284256	119284256	8553170	1	862,	0,
#Partially deleted in new
chr12	119334711	119541047	chr12:119334711-119541047	3	+	119335176	119540715	789624	14	555,80,171,108,108,91,235,85,72,63,126,132,190,434,	0,93971,137282,144382,154047,165366,170357,181911,185409,188227,188981,193903,196162,205902,
#Partially deleted in new
chr12	119334711	119433636	chr12:119334711-119433636	1	+	119335176	119433617	789624	3	555,80,251,	0,93971,98674,
#Partially deleted in new
chr12	119334928	119428925	chr12:119334928-119428925	1	+	119335176	119428766	789624	2	338,243,	0,93754,
#Partially deleted in new
chr12	119335026	119479752	chr12:119335026-119479752	0	+	119335026	119335026	8553170	5	240,80,171,108,266,	0,93656,136967,144067,144460,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	119335210	119447912	chr12:119335210-119447912	0	+	119335210	119335210	8553170	4	56,80,151,159,	0,93472,94365,112543,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	119387986	119668079	chr12:119387986-119668079	1	-	119387986	119387986	8553170	4	342,116,98,137,	0,14328,165561,279956,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	119387990	119594501	chr12:119387990-119594501	3	-	119387990	119387990	8553170	3	277,98,320,	0,165557,206191,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	119387990	119594240	chr12:119387990-119594240	0	-	119387990	119387990	8553170	3	338,98,59,	0,165557,206191,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	119593458	119643066	chr12:119593458-119643066	3	+	119593848	119640705	789624	3	576,137,2368,	0,36277,47240,
#Partially deleted in new
chr12	119593913	119640813	chr12:119593913-119640813	0	+	119593913	119593913	8553170	4	121,137,65,115,	0,35822,40310,46785,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	119631089	119631386	chr12:119631089-119631386	3	-	119631089	119631089	8553170	1	297,	0,
#Partially deleted in new
chr12	119667752	119681630	chr12:119667752-119681630	3	+	119668244	119680325	0	7	651,164,94,115,134,69,1383,	0,4548,6211,6587,8784,12180,12495,
#Partially deleted in new
chr12	119667863	119681624	chr12:119667863-119681624	1	+	119668244	119680325	0	8	182,168,164,94,115,134,69,1377,	0,372,4437,6100,6476,8673,12069,12384,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	119668163	119671512	chr12:119668163-119671512	1	+	119668244	119671512	789624	2	240,18,	0,3331,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	119669423	119680841	chr12:119669423-119680841	1	+	119674420	119680325	789624	7	503,164,94,115,134,69,594,	0,2877,4540,4916,7113,10509,10824,
#Partially deleted in new
chr12	119672243	119679951	chr12:119672243-119679951	0	+	119674420	119679951	789624	5	221,94,115,134,19,	0,1720,2096,4293,7689,
#Partially deleted in new
chr12	119673809	119680001	chr12:119673809-119680001	0	+	119673809	119673809	8553170	4	248,115,134,69,	0,530,2727,6123,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	119677354	119681619	chr12:119677354-119681619	0	+	119677354	119677354	8553170	2	2647,1372,	0,2893,
#Deleted in new
chr12	119678984	119679981	chr12:119678984-119679981	0	+	119678984	119678984	8553170	2	518,49,	0,948,
#Deleted in new
chr12	119680077	119681587	chr12:119680077-119681587	0	+	119680077	119680077	8553170	1	1510,	0,
#Partially deleted in new
chr12	119685789	119877291	chr12:119685789-119877291	3	-	119688231	119876168	789624	48	2466,304,180,79,81,129,109,93,140,136,81,170,105,92,181,138,165,163,108,141,105,136,194,198,54,198,175,110,117,96,126,141,54,51,171,120,144,106,184,154,204,94,143,102,176,142,109,43,	0,4361,11869,12186,14955,15834,16060,18573,22389,24461,24750,26388,26801,27413,27678,28407,32455,32909,34688,35519,42712,44705,48374,49370,56621,66260,71581,72801,75149,81297,84995,86980,89996,90568,90882,96728,98118,99170,117416,137030,139375,146981,148296,164384,171733,183270,190283,191459,
#Partially deleted in new
chr12	119685790	119877288	chr12:119685790-119877288	1	-	119688231	119876168	789624	47	2465,304,180,79,81,129,109,93,140,136,81,170,105,92,181,138,165,163,108,141,105,136,194,198,54,198,175,110,117,96,141,54,51,171,120,144,106,184,154,204,94,143,102,176,142,109,40,	0,4360,11868,12185,14954,15833,16059,18572,22388,24460,24749,26387,26800,27412,27677,28406,32454,32908,34687,35518,42711,44704,48373,49369,56620,66259,71580,72800,75148,81296,86979,89995,90567,90881,96727,98117,99169,117415,137029,139374,146980,148295,164383,171732,183269,190282,191458,
#Partially deleted in new
chr12	119685792	119804478	chr12:119685792-119804478	0	-	119685792	119685792	8553170	39	2463,304,180,79,81,129,109,93,140,136,81,170,105,92,181,138,165,118,108,141,105,136,194,198,54,198,175,110,117,96,141,54,51,171,120,144,877,184,382,	0,4358,11866,12183,14952,15831,16057,18570,22386,24458,24747,26385,26798,27410,27675,28404,32452,32906,34685,35516,42709,44702,48371,49367,56618,66257,71578,72798,75146,81294,86977,89993,90565,90879,96725,98115,98396,117413,118304,
#Partially deleted in new
chr12	119687759	119877288	chr12:119687759-119877288	1	-	119688056	119876168	789624	13	305,40,106,184,154,204,94,143,102,176,142,109,40,	0,96252,97200,115446,135060,137405,145011,146326,162414,169763,181300,188313,189489,
#Partially deleted in new
chr12	119687948	119803383	chr12:119687948-119803383	0	-	119688231	119803383	789624	38	307,304,180,79,81,129,109,93,140,136,81,170,105,92,181,138,165,118,108,141,105,136,194,198,54,198,175,110,117,96,141,54,51,171,120,144,106,178,	0,2202,9710,10027,12796,13675,13901,16414,20230,22302,22591,24229,24642,25254,25519,26248,30296,30750,32529,33360,40553,42546,46215,47211,54462,64101,69422,70642,72990,79138,84821,87837,88409,88723,94569,95959,97011,115257,
#Partially deleted in new
chr12	119688210	119784361	chr12:119688210-119784361	0	-	119688210	119688210	8553170	38	45,304,180,79,81,129,109,93,140,136,81,170,105,92,181,138,165,118,108,141,105,136,194,198,54,198,175,110,117,96,126,141,54,51,171,120,144,173,	0,1940,9448,9765,12534,13413,13639,16152,19968,22040,22329,23967,24380,24992,25257,25986,30034,30488,32267,33098,40291,42284,45953,46949,54200,63839,69160,70380,72728,78876,82574,84559,87575,88147,88461,94307,95697,95978,
#Partially deleted in new
chr12	119690381	119698109	chr12:119690381-119698109	0	-	119690381	119690381	8553170	2	73,451,	0,7277,
#Partially deleted in new
chr12	119690400	119698185	chr12:119690400-119698185	0	-	119690400	119690400	8553170	3	51,180,210,	0,7258,7575,
#Partially deleted in new
chr12	119699767	119701011	chr12:119699767-119701011	3	+	119699767	119699767	8553170	2	135,316,	0,928,
#Partially deleted in new
chr12	119701851	119710732	chr12:119701851-119710732	0	-	119701851	119701851	8553170	4	107,93,140,193,	0,2511,6327,8688,
#Partially deleted in new
chr12	119704361	119711094	chr12:119704361-119711094	0	-	119704361	119704361	8553170	5	94,140,136,81,46,	0,3817,5889,6178,6687,
#Deleted in new
chr12	119710294	119711011	chr12:119710294-119711011	0	-	119710294	119710294	8553170	2	92,472,	0,245,
#Deleted in new
chr12	119712309	119713818	chr12:119712309-119713818	0	-	119712309	119712309	8553170	4	38,105,92,351,	0,281,893,1158,
#Deleted in new
chr12	119713018	119713758	chr12:119713018-119713758	0	-	119713018	119713018	8553170	2	276,291,	0,449,
#Deleted in new
chr12	119713633	119713724	chr12:119713633-119713724	3	-	119713633	119713633	5263520	1	91,	0,
#Partially deleted in new
chr12	119714208	119719001	chr12:119714208-119719001	0	-	119714208	119714208	8553170	3	126,165,303,	0,4036,4490,
#Partially deleted in new
chr12	119720523	119857687	chr12:119720523-119857687	0	-	119720523	119857687	789624	3	62,102,165,	0,129650,136999,
#Partially deleted in new
chr12	119730494	119752095	chr12:119730494-119752095	0	-	119730494	119735266	789624	5	136,243,198,54,46,	0,3669,4665,11916,21555,
#Partially deleted in new
chr12	119735199	119742842	chr12:119735199-119742842	0	-	119735199	119735199	8553170	2	158,432,	0,7211,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	119782155	119803486	chr12:119782155-119803486	0	-	119782155	119782155	8553170	3	1896,106,281,	0,2804,21050,
#Partially deleted in new
chr12	119785024	119804491	chr12:119785024-119804491	0	-	119785024	119785024	8553170	3	41,184,329,	0,18181,19138,
#Deleted in new
chr12	119959423	119959754	chr12:119959423-119959754	7	+	119959423	119959423	16724991	1	331,	0,
#Partially deleted in new
chr12	119989868	120094494	chr12:119989868-120094494	3	+	119989868	120093161	789624	9	429,216,117,147,180,219,131,121,1495,	0,8652,71841,74864,81753,82642,91018,100082,103131,
#Partially deleted in new
chr12	119989879	120093898	chr12:119989879-120093898	0	+	119989879	119999811	789624	9	418,216,152,133,147,180,131,121,899,	0,8641,9881,71814,74853,81742,91007,100071,103120,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	119990152	119993409	chr12:119990152-119993409	0	+	119990152	119990152	8553170	2	145,990,	0,2267,
#Deleted in new
chr12	119999852	120000554	chr12:119999852-120000554	0	+	119999852	119999852	8553170	2	60,285,	0,417,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	120018899	120019261	chr12:120018899-120019261	3	+	120018899	120018899	8553170	1	362,	0,
#Deleted in new
chr12	120057034	120057180	chr12:120057034-120057180	7	+	120057034	120057034	16724991	1	146,	0,
#Partially deleted in new
chr12	120064636	120081018	chr12:120064636-120081018	0	+	120064636	120064636	8553170	3	243,180,132,	0,6985,16250,
#Partially deleted in new
chr12	120071702	120093394	chr12:120071702-120093394	0	+	120071702	120093161	789624	6	99,219,144,131,121,395,	0,808,2740,9184,18248,21297,
#Partially deleted in new
chr12	120074443	120090190	chr12:120074443-120090190	0	+	120074443	120074443	8553170	3	143,131,240,	0,6443,15507,
#Partially deleted in new
chr12	120080680	120090027	chr12:120080680-120090027	0	+	120080680	120080680	8553170	2	337,77,	0,9270,
#Partially deleted in new
chr12	120080957	120093456	chr12:120080957-120093456	0	+	120080957	120090961	789624	4	60,121,109,457,	0,8993,9953,12042,
#Deleted in new
chr12	120090754	120093341	chr12:120090754-120093341	0	+	120090754	120090754	8553170	3	265,155,342,	0,492,2245,
#Deleted in new
chr12	120093018	120094491	chr12:120093018-120094491	0	+	120093018	120093018	8553170	2	204,289,	0,1184,
#Partially deleted in new
chr12	120095094	120116839	chr12:120095094-120116839	3	-	120097244	120116650	0	6	2279,125,125,124,51,241,	0,3716,3935,8731,13322,21504,
#Partially deleted in new
chr12	120096365	120117502	chr12:120096365-120117502	0	-	120099049	120116650	789624	7	1008,125,125,124,51,112,904,	0,2445,2664,7460,12051,12226,20233,
#Partially deleted in new
chr12	120096903	120116767	chr12:120096903-120116767	1	-	120097266	120116650	0	5	470,125,124,51,169,	0,2126,6922,11513,19695,
#Partially deleted in new
chr12	120097245	120116736	chr12:120097245-120116736	0	-	120097245	120116650	789624	6	128,125,77,124,51,138,	0,1565,1784,6580,11171,19353,
#Partially deleted in new
chr12	120097265	120099462	chr12:120097265-120099462	0	-	120097265	120097265	8553170	4	108,125,125,220,	0,1545,1764,1977,
#Partially deleted in new
chr12	120098947	120116767	chr12:120098947-120116767	0	-	120098947	120098947	8553170	4	207,124,51,169,	0,4878,9469,17651,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	120116906	120119000	chr12:120116906-120119000	3	+	120116906	120116906	8553170	1	2094,	0,
#Partially deleted in new
chr12	120127202	120194710	chr12:120127202-120194710	3	-	120127848	120194697	789624	58	772,219,108,149,97,115,194,231,114,270,144,93,162,165,216,118,143,197,139,69,221,180,115,122,247,195,166,71,190,128,144,81,182,156,199,114,94,179,125,190,160,76,93,153,174,99,51,129,75,109,69,135,99,109,132,64,103,31,	0,2073,3443,3982,4723,7088,7330,9299,10003,10342,10698,11120,11492,13656,15304,15621,17103,17436,17720,18059,19849,20964,22403,22719,23942,26010,26541,27767,28038,28389,29258,29709,30646,31257,32622,32939,34287,34677,35644,35867,37133,37443,41005,42966,46450,46868,47959,48543,48940,50244,50481,51422,51649,56366,56909,57621,63095,67477,
#Partially deleted in new
chr12	120134599	120137390	chr12:120134599-120137390	0	-	120134599	120134599	8553170	3	127,231,185,	0,1902,2606,
#Deleted in new
chr12	120138015	120138938	chr12:120138015-120138938	0	-	120138015	120138015	8553170	3	29,93,244,	0,307,679,
#Deleted in new
chr12	120155028	120155687	chr12:120155028-120155687	0	-	120155028	120155028	8553170	2	402,96,	0,563,
#Deleted in new
chr12	120155347	120157114	chr12:120155347-120157114	0	-	120155347	120155347	8553170	4	83,128,144,203,	0,244,1113,1564,
#Deleted in new
chr12	120155433	120155499	chr12:120155433-120155499	3	-	120155433	120155433	5263520	1	66,	0,
#Partially deleted in new
chr12	120157952	120160303	chr12:120157952-120160303	0	-	120157952	120157952	8553170	4	78,156,199,162,	0,507,1872,2189,
#Partially deleted in new
chr12	120158459	120162234	chr12:120158459-120162234	0	-	120158459	120158459	8553170	5	156,199,114,94,355,	0,1365,1682,3030,3420,
#Partially deleted in new
chr12	120164670	120168414	chr12:120164670-120168414	0	-	120164670	120164670	8553170	2	51,207,	0,3537,
#Partially deleted in new
chr12	120175789	120177790	chr12:120175789-120177790	0	-	120175789	120175789	8553170	3	85,75,344,	0,353,1657,
#Partially deleted in new
chr12	120196685	120201211	chr12:120196685-120201211	3	-	120196772	120200783	0	8	249,141,186,147,88,176,102,129,	0,636,1868,2168,2432,2624,4044,4397,
#Partially deleted in new
chr12	120196698	120201099	chr12:120196698-120201099	1	-	120196772	120200783	0	7	236,141,186,147,88,176,370,	0,623,1855,2155,2419,2611,4031,
#Deleted in new
chr12	120196698	120197375	chr12:120196698-120197375	0	-	120196698	120196698	8553170	1	677,	0,
#Partially deleted in new
chr12	120196701	120201107	chr12:120196701-120201107	1	-	120196772	120200783	0	7	233,141,147,88,176,102,25,	0,620,2152,2416,2608,4028,4381,
#Partially deleted in new
chr12	120196701	120201110	chr12:120196701-120201110	1	-	120196772	120200783	789624	8	233,141,78,147,88,176,102,28,	0,620,1852,2152,2416,2608,4028,4381,
#Deleted in new
chr12	120196701	120197808	chr12:120196701-120197808	1	-	120196772	120197483	789624	2	233,487,	0,620,
#Partially deleted in new
chr12	120196706	120201211	chr12:120196706-120201211	1	-	120196772	120200783	0	8	228,141,186,147,88,176,162,129,	0,615,1847,2147,2411,2603,4023,4376,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	120196706	120201110	chr12:120196706-120201110	0	-	120196706	120196706	8553170	6	228,141,186,147,88,1801,	0,615,1847,2147,2411,2603,
#Partially deleted in new
chr12	120196707	120201110	chr12:120196707-120201110	0	-	120199376	120200783	789624	8	227,141,186,147,88,176,113,28,	0,614,1846,2146,2410,2602,4011,4375,
#Partially deleted in new
chr12	120196813	120201097	chr12:120196813-120201097	0	-	120198723	120200783	789624	8	121,141,217,106,88,176,102,15,	0,508,1740,2081,2304,2496,3916,4269,
#Partially deleted in new
chr12	120196841	120200815	chr12:120196841-120200815	0	-	120196841	120200783	789624	6	93,141,186,88,176,86,	0,480,1712,2276,2468,3888,
#Partially deleted in new
chr12	120197321	120200832	chr12:120197321-120200832	0	-	120197321	120200783	789624	6	141,186,147,88,116,103,	0,1232,1532,1796,1988,3408,
#Partially deleted in new
chr12	120197321	120200824	chr12:120197321-120200824	0	-	120198734	120200783	789624	6	141,186,106,88,176,95,	0,1232,1573,1796,1988,3408,
#Partially deleted in new
chr12	120197322	120200825	chr12:120197322-120200825	0	-	120198734	120200783	789624	6	140,217,147,88,176,96,	0,1231,1531,1795,1987,3407,
#Partially deleted in new
chr12	120197371	120201235	chr12:120197371-120201235	0	-	120197371	120200783	789624	7	91,186,147,88,176,162,153,	0,1182,1482,1746,1938,3358,3711,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	120198357	120200832	chr12:120198357-120200832	0	-	120198357	120198357	8553170	3	848,176,103,	0,952,2372,
#Partially deleted in new
chr12	120198555	120200864	chr12:120198555-120200864	0	-	120198555	120198555	8553170	4	445,88,176,135,	0,562,754,2174,
#Partially deleted in new
chr12	120198703	120201108	chr12:120198703-120201108	0	-	120198703	120200057	789624	7	36,147,88,176,105,102,26,	0,150,414,606,1342,2026,2379,
#Partially deleted in new
chr12	120198744	120200825	chr12:120198744-120200825	0	-	120198744	120198744	8553170	5	55,147,88,176,96,	0,109,373,565,1985,
#Partially deleted in new
chr12	120198755	120201089	chr12:120198755-120201089	0	-	120198755	120198755	8553170	4	245,88,176,360,	0,362,554,1974,
#Partially deleted in new
chr12	120198858	120201110	chr12:120198858-120201110	0	-	120198858	120198858	8553170	4	142,368,113,28,	0,259,1860,2224,
#Partially deleted in new
chr12	120198942	120200852	chr12:120198942-120200852	0	-	120198942	120200057	789624	5	58,88,176,105,134,	0,175,367,1103,1776,
#Partially deleted in new
chr12	120198946	120200820	chr12:120198946-120200820	0	-	120198946	120200783	789624	4	47,88,176,91,	0,171,363,1783,
#Partially deleted in new
chr12	120198979	120201110	chr12:120198979-120201110	0	-	120198979	120198979	8553170	4	226,176,113,28,	0,330,1739,2103,
#Partially deleted in new
chr12	120198980	120201110	chr12:120198980-120201110	0	-	120198980	120198980	8553170	4	20,368,102,28,	0,137,1749,2102,
#Partially deleted in new
chr12	120199165	120201085	chr12:120199165-120201085	0	-	120199165	120199165	8553170	2	320,356,	0,1564,
#Partially deleted in new
chr12	120199456	120201095	chr12:120199456-120201095	0	-	120199456	120199456	8553170	2	29,377,	0,1262,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	120201290	120212919	chr12:120201290-120212919	1	+	120201290	120201290	789624	4	136,77,96,545,	0,5254,8548,11084,
#Partially deleted in new
chr12	120201326	120210519	chr12:120201326-120210519	1	+	120201326	120201326	8553170	4	100,77,96,434,	0,5218,8512,8759,
#Partially deleted in new
chr12	120201355	120210107	chr12:120201355-120210107	1	+	120201355	120201355	8553170	3	71,168,269,	0,5189,8483,
#Partially deleted in new
chr12	120201355	120211512	chr12:120201355-120211512	0	+	120201355	120201355	8553170	4	71,77,96,583,	0,5189,8483,9574,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	120201370	120213138	chr12:120201370-120213138	3	+	120201370	120201370	8553170	5	56,77,96,177,764,	0,5174,8468,9559,11004,
#Partially deleted in new
chr12	120210438	120265771	chr12:120210438-120265771	1	-	120212313	120265629	0	11	2142,149,82,174,315,136,202,137,116,227,155,	0,3403,3697,4386,4664,11184,12110,12424,13279,13712,55178,
#Partially deleted in new
chr12	120210446	120265771	chr12:120210446-120265771	3	-	120212313	120265629	0	12	2134,149,82,174,171,102,136,202,137,116,227,155,	0,3395,3689,4378,4656,5113,11176,12102,12416,13271,13704,55170,
#Partially deleted in new
chr12	120210446	120265771	chr12:120210446-120265771	1	-	120212313	120265629	0	11	2134,149,82,174,171,136,202,137,116,227,155,	0,3395,3689,4378,4656,11176,12102,12416,13271,13704,55170,
#Partially deleted in new
chr12	120210446	120250161	chr12:120210446-120250161	1	-	120212313	120222956	0	11	2134,149,82,174,171,136,202,137,116,227,279,	0,3395,3689,4378,4656,11176,12102,12416,13271,13704,39436,
#Partially deleted in new
chr12	120210447	120226844	chr12:120210447-120226844	1	-	120212313	120226368	789624	12	2133,149,82,174,171,102,136,202,137,116,227,483,	0,3394,3688,4377,4655,5112,11175,12101,12415,13270,13703,15914,
#Partially deleted in new
chr12	120210447	120219378	chr12:120210447-120219378	0	-	120216711	120219378	789624	9	2133,149,82,174,315,102,161,844,172,	0,3394,3688,4377,4655,5112,5482,5825,8759,
#Partially deleted in new
chr12	120210450	120265718	chr12:120210450-120265718	0	-	120216711	120265629	789624	14	2130,149,82,174,171,102,844,885,136,202,137,116,227,102,	0,3391,3685,4374,4652,5109,5822,8756,11172,12098,12412,13267,13700,55166,
#Partially deleted in new
chr12	120212313	120224377	chr12:120212313-120224377	0	-	120212313	120212313	8553170	10	267,149,82,174,315,136,202,137,116,227,	0,1528,1822,2511,2789,9309,10235,10549,11404,11837,
#Partially deleted in new
chr12	120212313	120265629	chr12:120212313-120265629	1	-	120212313	120265629	789624	15	267,149,82,174,171,102,309,276,885,136,202,137,116,227,13,	0,1528,1822,2511,2789,3246,3959,4527,6893,9309,10235,10549,11404,11837,53303,
#Deleted in new
chr12	120212326	120212769	chr12:120212326-120212769	0	+	120212326	120212326	8553170	1	443,	0,
#Deleted in new
chr12	120214835	120216006	chr12:120214835-120216006	0	-	120214835	120214835	8553170	4	163,171,102,77,	0,267,724,1094,
#Partially deleted in new
chr12	120215240	120222589	chr12:120215240-120222589	0	-	120215240	120222589	789624	5	33,102,309,136,41,	0,319,1032,6382,7308,
#Partially deleted in new
chr12	120221642	120265737	chr12:120221642-120265737	0	-	120224199	120265629	789624	7	116,202,137,116,227,85,121,	0,906,1220,2075,2508,3000,43974,
#Partially deleted in new
chr12	120222716	120226795	chr12:120222716-120226795	0	-	120222716	120226368	789624	5	34,137,116,227,443,	0,146,1001,1434,3636,
#Partially deleted in new
chr12	120222733	120226055	chr12:120222733-120226055	0	-	120222733	120222956	789624	6	17,137,116,227,85,147,	0,129,984,1417,1909,3175,
#Partially deleted in new
chr12	120222736	120226069	chr12:120222736-120226069	0	-	120222736	120222956	789624	5	14,137,116,227,161,	0,126,981,1414,3172,
#Partially deleted in new
chr12	120222862	120224750	chr12:120222862-120224750	0	-	120222862	120222956	789624	4	137,116,227,108,	0,855,1288,1780,
#Partially deleted in new
chr12	120223719	120265706	chr12:120223719-120265706	0	-	120223719	120223719	8553170	4	114,227,85,90,	0,431,40512,41897,
#Partially deleted in new
chr12	120224153	120265692	chr12:120224153-120265692	0	-	120224153	120224153	8553170	3	224,279,76,	0,2685,41463,
#Deleted in new
chr12	120224174	120226499	chr12:120224174-120226499	0	-	120224174	120224174	8553170	2	203,347,	0,1978,
#Deleted in new
chr12	120224743	120225421	chr12:120224743-120225421	3	+	120224743	120224743	8553170	1	678,	0,
#Partially deleted in new
chr12	120226654	120265737	chr12:120226654-120265737	0	-	120226654	120226654	8553170	2	463,121,	0,38962,
#Deleted in new
chr12	120247459	120247791	chr12:120247459-120247791	7	+	120247459	120247459	16724991	1	332,	0,
#Deleted in new
chr12	120282302	120282716	chr12:120282302-120282716	7	+	120282302	120282302	16724991	1	414,	0,
#Partially deleted in new
chr12	120302315	120304058	chr12:120302315-120304058	0	+	120303738	120304058	789624	2	63,468,	0,1275,
#Partially deleted in new
chr12	120302320	120313249	chr12:120302320-120313249	3	+	120303561	120313036	789624	4	58,498,295,366,	0,1240,10135,10563,
#Partially deleted in new
chr12	120303879	120313241	chr12:120303879-120313241	0	+	120303879	120303879	8553170	3	179,167,358,	0,8704,9004,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	120313237	120313341	chr12:120313237-120313341	3	-	120313237	120313237	8553170	1	104,	0,
#Partially deleted in new
chr12	120322110	120327789	chr12:120322110-120327789	3	-	120322192	120327753	0	4	207,128,160,70,	0,2823,3750,5609,
#Partially deleted in new
chr12	120322114	120327779	chr12:120322114-120327779	1	-	120322298	120327753	789624	3	203,160,60,	0,3746,5605,
#Partially deleted in new
chr12	120322116	120326093	chr12:120322116-120326093	1	-	120322192	120325967	789624	3	201,128,233,	0,2817,3744,
#Partially deleted in new
chr12	120341329	120369180	chr12:120341329-120369180	3	-	120345590	120369091	789624	15	1776,63,188,69,57,81,118,83,49,93,42,85,82,41,148,	0,4240,4805,6116,10014,11969,15572,16486,17675,21713,23384,26678,26862,27503,27703,
#Partially deleted in new
chr12	120346221	120368069	chr12:120346221-120368069	0	-	120346221	120368069	789624	9	101,69,81,118,83,49,93,42,62,	0,1224,7077,10680,11594,12783,16821,18492,21786,
#Partially deleted in new
chr12	120353322	120361508	chr12:120353322-120361508	0	-	120353322	120353322	8553170	5	57,118,83,49,115,	0,3579,4493,5682,8071,
#Deleted in new
chr12	120369439	120371688	chr12:120369439-120371688	7	+	120369439	120369439	16724991	3	86,111,287,	0,1639,1962,
#Deleted in new
chr12	120371387	120371635	chr12:120371387-120371635	5	+	120371387	120371387	16724991	1	248,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	120389545	120395994	chr12:120389545-120395994	3	+	120389545	120389545	8553170	4	23,76,126,140,	0,3956,4851,6309,
#Partially deleted in new
chr12	120438089	120440742	chr12:120438089-120440742	3	+	120438126	120440537	789624	3	140,143,289,	0,289,2364,
#Deleted in new
chr12	120438089	120438810	chr12:120438089-120438810	0	+	120438089	120438089	8553170	2	140,432,	0,289,
#Partially deleted in new
chr12	120438197	120460006	chr12:120438197-120460006	3	+	120438197	120459959	789624	5	32,143,173,104,100,	0,181,8459,18878,21709,
#Deleted in new
chr12	120439970	120440737	chr12:120439970-120440737	0	+	120439970	120439970	8553170	1	767,	0,
#Partially deleted in new
chr12	120443960	120446412	chr12:120443960-120446412	3	-	120444871	120446372	0	2	995,187,	0,2265,
#Partially deleted in new
chr12	120444207	120446370	chr12:120444207-120446370	0	-	120444207	120444207	8553170	2	748,405,	0,1758,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	120446437	120463749	chr12:120446437-120463749	3	+	120446480	120459959	789624	4	124,173,104,3843,	0,219,10638,13469,
#Partially deleted in new
chr12	120446576	120459921	chr12:120446576-120459921	0	+	120446806	120459921	789624	3	253,104,15,	0,10499,13330,
#Partially deleted in new
chr12	120450436	120450803	chr12:120450436-120450803	7	-	120450436	120450436	16724991	1	367,	0,
#Partially deleted in new
chr12	120461667	120469793	chr12:120461667-120469793	3	-	120462018	120469609	789624	4	495,173,161,372,	0,2282,3959,7754,
#Deleted in new
chr12	120461692	120463396	chr12:120461692-120463396	0	-	120461692	120461692	8553170	1	1704,	0,
#Deleted in new
chr12	120461710	120464943	chr12:120461710-120464943	0	-	120461710	120461710	8553170	2	452,994,	0,2239,
#Partially deleted in new
chr12	120461761	120469639	chr12:120461761-120469639	0	-	120464811	120469609	789624	5	401,173,90,161,218,	0,2188,2971,3865,7660,
#Partially deleted in new
chr12	120463977	120469571	chr12:120463977-120469571	0	-	120463977	120469571	789624	3	145,32,150,	0,1778,5444,
#Partially deleted in new
chr12	120465138	120469718	chr12:120465138-120469718	0	-	120465138	120465138	8553170	2	649,297,	0,4283,
#Partially deleted in new
chr12	120469849	120498493	chr12:120469849-120498493	3	+	120496421	120498210	0	3	255,138,421,	0,26566,28223,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	120469856	120496547	chr12:120469856-120496547	0	+	120496421	120496547	789624	6	248,61,76,123,154,132,	0,18260,18721,23946,25427,26559,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	120469882	120498237	chr12:120469882-120498237	1	+	120496421	120498210	0	5	222,61,76,138,165,	0,18234,18695,26533,28190,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	120490327	120495940	chr12:120490327-120495940	3	-	120490327	120490327	789624	2	1783,118,	0,5495,
#Deleted in new
chr12	120496055	120498493	chr12:120496055-120498493	1	+	120496421	120498210	0	3	161,138,421,	0,360,2017,
#Deleted in new
chr12	120496081	120496896	chr12:120496081-120496896	1	+	120496421	120496625	789624	2	135,481,	0,334,
#Deleted in new
chr12	120496090	120498491	chr12:120496090-120498491	1	+	120496421	120498210	0	3	126,152,419,	0,311,1982,
#Deleted in new
chr12	120496100	120496681	chr12:120496100-120496681	1	+	120496421	120496625	789624	1	581,	0,
#Deleted in new
chr12	120496112	120498350	chr12:120496112-120498350	1	+	120496421	120498210	0	2	441,278,	0,1960,
#Deleted in new
chr12	120496112	120497673	chr12:120496112-120497673	1	+	120496421	120496625	789624	2	104,1272,	0,289,
#Deleted in new
chr12	120496112	120498472	chr12:120496112-120498472	1	+	120496421	120498131	789624	3	104,138,353,	0,303,2007,
#Deleted in new
chr12	120497823	120498493	chr12:120497823-120498493	0	+	120497823	120497823	8553170	1	670,	0,
#Deleted in new
chr12	120500734	120501090	chr12:120500734-120501090	3	-	120500734	120500734	8553170	1	356,	0,
#Partially deleted in new
chr12	120503273	120529182	chr12:120503273-120529182	3	-	120503783	120529141	789624	7	612,112,89,107,222,150,243,	0,696,1621,6743,13293,18940,25666,
#Partially deleted in new
chr12	120503573	120529161	chr12:120503573-120529161	1	-	120503783	120529141	789624	6	312,112,89,107,150,222,	0,396,1321,6443,18640,25366,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	120504570	120504659	chr12:120504570-120504659	3	-	120504570	120504570	8553170	1	89,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	120509850	120516684	chr12:120509850-120516684	0	-	120509850	120509850	8553170	2	273,118,	0,6716,
#Partially deleted in new
chr12	120510019	120529165	chr12:120510019-120529165	0	-	120510019	120529141	789624	3	104,222,226,	0,6547,18920,
#Partially deleted in new
chr12	120510062	120534434	chr12:120510062-120534434	0	-	120510062	120522322	789624	4	61,222,150,127,	0,6504,12151,24245,
#Partially deleted in new
chr12	120522663	120523443	chr12:120522663-120523443	7	-	120522663	120522663	16724991	2	361,92,	0,688,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	120526892	120529154	chr12:120526892-120529154	0	-	120526892	120526892	8553170	2	486,215,	0,2047,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	120533479	120534836	chr12:120533479-120534836	0	+	120534811	120534836	789624	2	142,179,	0,1178,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr12	120534350	120577594	chr12:120534350-120577594	3	+	120534811	120576666	789624	17	618,197,200,91,185,137,161,126,277,134,118,102,156,101,58,159,1005,	0,12054,18148,20367,22931,23195,26375,28594,28996,29459,30721,31077,32474,36840,41280,41441,42239,
#Partially deleted in new
chr12	120534355	120562982	chr12:120534355-120562982	0	+	120534811	120562982	789624	5	52,311,74,87,38,	0,302,5012,26444,28589,
#Partially deleted in new
chr12	120534587	120557596	chr12:120534587-120557596	0	+	120534811	120539465	789624	7	381,101,197,200,91,185,51,	0,4780,11817,17911,20130,22694,22958,
#Partially deleted in new
chr12	120534811	120576886	chr12:120534811-120576886	1	+	120534811	120576666	789624	17	157,197,200,91,185,137,161,126,292,134,118,102,156,101,58,159,297,	0,11593,17687,19906,22470,22734,25914,28133,28520,28998,30260,30616,32013,36379,40819,40980,41778,
#Partially deleted in new
chr12	120534871	120557619	chr12:120534871-120557619	0	+	120534871	120554738	789624	5	97,197,91,185,74,	0,11533,19846,22410,22674,
#Partially deleted in new
chr12	120535425	120552666	chr12:120535425-120552666	0	+	120539461	120552666	789624	4	117,101,197,168,	0,3942,10979,17073,
#Partially deleted in new
chr12	120546456	120557404	chr12:120546456-120557404	0	+	120546456	120546456	8553170	4	145,200,91,112,	0,6042,8261,10836,
#Partially deleted in new
chr12	120554349	120557368	chr12:120554349-120557368	0	+	120554349	120554349	8553170	2	459,87,	0,2932,
#Partially deleted in new
chr12	120554770	120563373	chr12:120554770-120563373	0	+	120554770	120563373	789624	5	38,185,137,161,27,	0,2511,2775,5955,8576,
#Partially deleted in new
chr12	120557543	120563490	chr12:120557543-120563490	0	+	120557543	120557543	8553170	4	139,161,126,157,	0,3182,5401,5790,
#Partially deleted in new
chr12	120560725	120563456	chr12:120560725-120563456	0	+	120560725	120563456	789624	3	161,126,125,	0,2219,2606,
#Partially deleted in new
chr12	120560838	120563224	chr12:120560838-120563224	0	+	120560838	120560838	8553170	2	48,280,	0,2106,
#Partially deleted in new
chr12	120560843	120566894	chr12:120560843-120566894	0	+	120563934	120566894	789624	7	43,126,183,134,118,102,70,	0,2101,2597,2966,4228,4584,5981,
#Deleted in new
chr12	120563271	120563905	chr12:120563271-120563905	0	+	120563271	120563271	8553170	2	352,96,	0,538,
#Partially deleted in new
chr12	120563454	120566942	chr12:120563454-120566942	0	+	120563454	120566942	789624	5	169,128,118,102,118,	0,361,1617,1973,3370,
#Partially deleted in new
chr12	120563484	120576888	chr12:120563484-120576888	0	+	120563484	120574503	789624	10	139,134,118,102,156,101,70,58,159,299,	0,325,1587,1943,3340,7706,10983,12146,12307,13105,
#Partially deleted in new
chr12	120563747	120565527	chr12:120563747-120565527	0	+	120563747	120563747	8553170	3	196,118,100,	0,1324,1680,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	120565095	120574938	chr12:120565095-120574938	0	+	120565095	120565095	8553170	5	94,102,156,101,471,	0,332,1729,6095,9372,
#Partially deleted in new
chr12	120565435	120576882	chr12:120565435-120576882	0	+	120565435	120565435	8553170	5	94,156,58,159,293,	0,1389,10195,10356,11154,
#Partially deleted in new
chr12	120565483	120576886	chr12:120565483-120576886	0	+	120565483	120576666	789624	5	46,101,58,159,297,	0,5707,10147,10308,11106,
#Partially deleted in new
chr12	120566952	120575950	chr12:120566952-120575950	0	+	120566952	120566952	8553170	4	28,70,58,159,	0,7515,8678,8839,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	120570202	120577247	chr12:120570202-120577247	0	+	120570202	120570202	8553170	4	29,552,149,658,	0,4934,5599,6387,
#Deleted in new
chr12	120575600	120576878	chr12:120575600-120576878	0	+	120575600	120575600	8553170	3	88,159,289,	0,191,989,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	120578763	120581379	chr12:120578763-120581379	1	-	120579317	120581362	789624	4	649,84,143,37,	0,750,2351,2579,
#Partially deleted in new
chr12	120579044	120581398	chr12:120579044-120581398	3	-	120579317	120581362	789624	5	368,84,150,143,56,	0,469,729,2070,2298,
#Deleted in new
chr12	120579047	120579625	chr12:120579047-120579625	0	-	120579047	120579047	8553170	1	578,	0,
#Partially deleted in new
chr12	120579047	120581336	chr12:120579047-120581336	0	-	120579047	120579047	8553170	4	365,84,150,222,	0,466,726,2067,
#Partially deleted in new
chr12	120579153	120581381	chr12:120579153-120581381	0	-	120579153	120579153	8553170	5	259,84,150,262,39,	0,360,620,1842,2189,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	120579241	120579995	chr12:120579241-120579995	0	-	120579241	120579241	8553170	2	171,482,	0,272,
#Partially deleted in new
chr12	120579351	120581251	chr12:120579351-120581251	0	-	120579351	120579351	8553170	3	61,410,137,	0,162,1763,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	120579368	120580139	chr12:120579368-120580139	0	-	120579368	120579368	8553170	3	44,84,366,	0,145,405,
#Deleted in new
chr12	120580595	120581398	chr12:120580595-120581398	0	-	120580595	120580595	8553170	2	662,56,	0,747,
#Partially deleted in new
chr12	120594014	120594548	chr12:120594014-120594548	7	-	120594014	120594014	16724991	1	534,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	120629610	120641591	chr12:120629610-120641591	3	-	120629610	120629610	8553170	2	886,129,	0,11852,
#Partially deleted in new
chr12	120630104	120640153	chr12:120630104-120640153	0	-	120630104	120630104	8553170	2	392,104,	0,9945,
#Partially deleted in new
chr12	120640551	120667311	chr12:120640551-120667311	1	+	120640685	120666900	0	6	788,31,144,110,148,437,	0,19326,19644,20179,20519,26323,
#Partially deleted in new
chr12	120650084	120667032	chr12:120650084-120667032	3	+	120650637	120666900	0	7	598,180,31,144,110,148,158,	0,6008,9793,10111,10646,10986,16790,
#Partially deleted in new
chr12	120650506	120667035	chr12:120650506-120667035	1	+	120650637	120666900	0	6	176,31,144,110,148,161,	0,9371,9689,10224,10564,16368,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	120655298	120667324	chr12:120655298-120667324	1	+	120655810	120666900	789624	6	974,31,144,110,148,450,	0,4579,4897,5432,5772,11576,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	120658975	120662414	chr12:120658975-120662414	0	+	120658975	120658975	8553170	2	1364,1684,	0,1755,
#Partially deleted in new
chr12	120686868	120701864	chr12:120686868-120701864	3	+	120687296	120696545	789624	5	663,179,177,58,5549,	0,7222,7955,8226,9447,
#Partially deleted in new
chr12	120687244	120696690	chr12:120687244-120696690	1	+	120687296	120696555	789624	3	287,179,375,	0,6846,9071,
#Deleted in new
chr12	120693993	120696353	chr12:120693993-120696353	0	+	120694104	120696353	789624	4	276,177,58,38,	0,830,1101,2322,
#Deleted in new
chr12	120694166	120696578	chr12:120694166-120696578	0	+	120694166	120696555	789624	3	103,177,263,	0,657,2149,
#Deleted in new
chr12	120696402	120700941	chr12:120696402-120700941	0	+	120696402	120696402	8553170	2	139,478,	0,4061,
#Deleted in new
chr12	120697123	120699501	chr12:120697123-120699501	3	-	120697123	120697123	8553170	2	324,251,	0,2127,
#Deleted in new
chr12	120698263	120699541	chr12:120698263-120699541	1	-	120698263	120698263	8553170	2	88,495,	0,783,
#Deleted in new
chr12	120703866	120704282	chr12:120703866-120704282	3	+	120703866	120703866	8553170	1	416,	0,
#Deleted in new
chr12	120709111	120709523	chr12:120709111-120709523	3	+	120709111	120709111	8553170	1	412,	0,
#Partially deleted in new
chr12	120710434	120723640	chr12:120710434-120723640	3	+	120710474	120720032	789624	5	284,114,112,173,3721,	0,2839,6193,6435,9485,
#Deleted in new
chr12	120710457	120711353	chr12:120710457-120711353	0	+	120710457	120710457	8553170	1	896,	0,
#Partially deleted in new
chr12	120710516	120716640	chr12:120710516-120716640	0	+	120710516	120710516	8553170	4	202,156,114,13,	0,1073,2757,6111,
#Deleted in new
chr12	120721506	120723639	chr12:120721506-120723639	3	-	120721506	120721506	8553170	2	508,61,	0,2072,
#Deleted in new
chr12	120723192	120723266	chr12:120723192-120723266	3	+	120723192	120723192	5263520	1	74,	0,
#Partially deleted in new
chr12	120725734	120740008	chr12:120725734-120740008	3	+	120725885	120739448	0	10	197,164,150,112,152,171,138,96,57,713,	0,1291,11251,11621,12102,12545,12798,13085,13405,13561,
#Partially deleted in new
chr12	120725773	120737805	chr12:120725773-120737805	0	+	120725773	120725773	8553170	3	158,164,820,	0,1252,11212,
#Partially deleted in new
chr12	120725860	120739594	chr12:120725860-120739594	1	+	120725885	120739448	789624	10	71,164,150,112,140,171,138,96,57,299,	0,1165,11125,11495,12188,12419,12672,12959,13279,13435,
#Partially deleted in new
chr12	120740469	120761592	chr12:120740469-120761592	3	-	120740469	120740469	8553170	3	74,307,202,	0,742,20921,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	120762509	120904371	chr12:120762509-120904371	3	-	120764998	120903867	789624	11	2561,110,200,164,107,113,79,120,89,78,527,	0,3753,4884,5815,6443,20145,21164,21964,28959,48299,141335,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	120764464	120770137	chr12:120764464-120770137	0	-	120764464	120764464	8553170	5	606,110,200,164,1185,	0,1798,2929,3860,4488,
#Partially deleted in new
chr12	120764890	120768631	chr12:120764890-120768631	0	-	120764890	120764890	8553170	4	180,110,200,307,	0,1372,2503,3434,
#Partially deleted in new
chr12	120768437	120903494	chr12:120768437-120903494	0	-	120768437	120791547	789624	9	51,107,113,79,120,89,78,71,55,	0,515,14217,15236,16036,23031,42371,133440,135002,
#Partially deleted in new
chr12	120768957	120903370	chr12:120768957-120903370	0	-	120768957	120791547	789624	7	102,113,79,120,89,78,55,	0,13697,14716,15516,22511,41851,134358,
#Partially deleted in new
chr12	120768996	120903370	chr12:120768996-120903370	0	-	120768996	120784525	789624	6	63,113,79,120,78,55,	0,13658,14677,15477,41812,134319,
#Partially deleted in new
chr12	120782689	120835657	chr12:120782689-120835657	0	-	120782689	120791547	789624	6	78,79,120,89,78,219,	0,984,1784,8779,28119,52749,
#Partially deleted in new
chr12	120784202	120791945	chr12:120784202-120791945	0	-	120784202	120784202	8553170	2	391,477,	0,7266,
#Partially deleted in new
chr12	120784473	120811442	chr12:120784473-120811442	0	-	120784473	120791547	789624	4	120,89,78,244,	0,6995,26335,26725,
#Deleted in new
chr12	120845109	120845647	chr12:120845109-120845647	7	-	120845109	120845109	16724991	1	538,	0,
#Deleted in new
chr12	120914399	120915123	chr12:120914399-120915123	7	+	120914399	120914399	16724991	1	724,	0,
#Deleted in new
chr12	120916744	120917236	chr12:120916744-120917236	7	+	120916744	120916744	16724991	1	492,	0,
#Partially deleted in new
chr12	120941727	120980771	chr12:120941727-120980771	3	-	120941727	120941727	8553170	2	215,128,	0,38916,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	120962798	120980931	chr12:120962798-120980931	1	-	120962798	120962798	8553170	5	546,73,114,123,288,	0,7499,11686,14000,17845,
#Partially deleted in new
chr12	120965659	120979747	chr12:120965659-120979747	1	-	120965659	120965659	8553170	3	256,167,134,	0,4739,13954,
#Partially deleted in new
chr12	120968612	120980906	chr12:120968612-120980906	1	-	120968612	120968612	8553170	2	396,263,	0,12031,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	120969837	120972292	chr12:120969837-120972292	0	-	120969837	120969837	789624	1	2455,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	120974374	120980965	chr12:120974374-120980965	1	-	120974374	120974374	8553170	2	224,322,	0,6269,
#Partially deleted in new
chr12	120978542	121002512	chr12:120978542-121002512	3	+	120978768	121001192	789624	10	552,200,187,242,152,202,192,122,145,1448,	0,10290,14977,15621,17719,17998,18931,20725,20940,22522,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	120978567	120998300	chr12:120978567-120998300	1	+	120978768	120997793	789624	7	527,200,187,242,152,202,827,	0,10265,14952,15596,17694,17973,18906,
#Partially deleted in new
chr12	120978625	121002509	chr12:120978625-121002509	1	+	120978768	121001192	789624	8	469,200,107,139,192,122,145,1445,	0,10207,14894,17978,18848,20642,20857,22439,
#Partially deleted in new
chr12	120978625	121002509	chr12:120978625-121002509	0	+	120978625	120996686	789624	10	469,200,187,37,31,202,192,122,145,1445,	0,10207,14894,15538,17757,17915,18848,20642,20857,22439,
#Partially deleted in new
chr12	120978625	121002509	chr12:120978625-121002509	1	+	120996645	121001192	789624	7	86,152,202,192,122,145,1445,	0,17636,17915,18848,20642,20857,22439,
#Partially deleted in new
chr12	120978625	121002509	chr12:120978625-121002509	1	+	120978768	120999357	789624	7	469,200,60,32,122,145,1445,	0,10207,14894,19008,20642,20857,22439,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	120978633	120998300	chr12:120978633-120998300	0	+	120978633	120978633	8553170	6	461,200,187,242,152,1760,	0,10199,14886,15530,17628,17907,
#Partially deleted in new
chr12	120978650	120997882	chr12:120978650-120997882	0	+	120978650	120978650	8553170	2	42,392,	0,18840,
#Partially deleted in new
chr12	120978650	120997882	chr12:120978650-120997882	0	+	120978650	120978650	8553170	2	190,392,	0,18840,
#Partially deleted in new
chr12	120978650	120997882	chr12:120978650-120997882	0	+	120978768	120996330	789624	6	444,200,242,152,202,409,	0,10182,15513,17611,17890,18823,
#Partially deleted in new
chr12	120978650	120997882	chr12:120978650-120997882	0	+	120978768	120996292	789624	6	444,200,187,152,202,409,	0,10182,14869,17611,17890,18823,
#Partially deleted in new
chr12	120978650	120997882	chr12:120978650-120997882	0	+	120978768	120996670	789624	3	190,126,409,	0,17966,18823,
#Partially deleted in new
chr12	120978745	121002512	chr12:120978745-121002512	0	+	120978768	120993553	789624	9	349,187,242,152,202,192,122,145,1448,	0,14774,15418,17516,17795,18728,20522,20737,22319,
#Partially deleted in new
chr12	120978745	121002512	chr12:120978745-121002512	1	+	120978768	121001192	789624	9	349,200,187,242,152,202,192,360,1448,	0,10087,14774,15418,17516,17795,18728,20522,22319,
#Partially deleted in new
chr12	120978748	121001269	chr12:120978748-121001269	1	+	120978768	121001192	789624	10	346,200,187,242,152,202,192,122,166,205,	0,10084,14771,15415,17513,17792,18725,20519,20713,22316,
#Deleted in new
chr12	120996389	120997882	chr12:120996389-120997882	0	+	120996389	120996389	8553170	2	353,409,	0,1084,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	121000485	121016487	chr12:121000485-121016487	3	-	121004152	121016474	789624	6	4004,91,74,99,43,158,	0,4517,5835,10342,10618,15844,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	121002421	121012448	chr12:121002421-121012448	1	-	121004152	121012448	789624	6	2071,91,74,99,43,19,	0,2581,3899,8406,8682,10008,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	121003790	121007229	chr12:121003790-121007229	0	-	121003790	121003790	8553170	3	702,91,909,	0,1212,2530,
#Partially deleted in new
chr12	121003792	121016502	chr12:121003792-121016502	1	-	121004152	121016474	789624	6	697,91,74,99,136,173,	0,1210,2528,7035,7218,12537,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	121003875	121016487	chr12:121003875-121016487	0	-	121012630	121016474	789624	7	617,91,74,99,43,257,158,	0,1127,2445,6952,7228,8554,12454,
#Partially deleted in new
chr12	121003891	121016487	chr12:121003891-121016487	1	-	121004152	121016474	789624	6	601,58,74,99,43,158,	0,1111,2429,6936,7212,12438,
#Partially deleted in new
chr12	121004215	121016429	chr12:121004215-121016429	0	-	121004215	121016429	789624	5	277,91,74,43,100,	0,787,2105,6888,12114,
#Partially deleted in new
chr12	121004241	121016345	chr12:121004241-121016345	0	-	121004241	121016265	789624	6	251,91,74,99,43,87,	0,761,2079,6586,6862,12017,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	121005923	121016480	chr12:121005923-121016480	0	-	121005923	121005923	8553170	4	471,99,43,151,	0,4904,5180,10406,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	121019110	121039242	chr12:121019110-121039242	3	-	121020560	121038971	0	6	1948,148,242,176,283,469,	0,4879,8465,12331,14350,19663,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	121020291	121039242	chr12:121020291-121039242	1	-	121020560	121038971	0	4	767,176,283,469,	0,11150,13169,18482,
#Partially deleted in new
chr12	121020556	121039156	chr12:121020556-121039156	1	-	121024026	121038971	0	5	502,148,176,283,383,	0,3433,10885,12904,18217,
#Partially deleted in new
chr12	121023738	121038947	chr12:121023738-121038947	0	-	121024026	121038947	789624	3	399,176,174,	0,7703,15035,
#Partially deleted in new
chr12	121053731	121059670	chr12:121053731-121059670	7	-	121053731	121053731	16724991	2	308,224,	0,5715,
#Partially deleted in new
chr12	121079841	121080124	chr12:121079841-121080124	7	+	121079841	121079841	16724991	1	283,	0,
#Partially deleted in new
chr12	121096026	121096429	chr12:121096026-121096429	3	-	121096026	121096026	8553170	1	403,	0,
#Deleted in new
chr12	121107042	121107174	chr12:121107042-121107174	3	+	121107042	121107042	8553170	1	132,	0,
#Deleted in new
chr12	121107219	121107490	chr12:121107219-121107490	7	+	121107219	121107219	16724991	1	271,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	121132818	121185081	chr12:121132818-121185081	0	+	121132970	121156097	789624	11	277,69,73,97,81,130,137,91,300,102,777,	0,23260,28083,29605,32538,33239,34669,42569,44328,47535,51486,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	121132827	121188032	chr12:121132827-121188032	3	+	121132970	121184802	789624	13	268,169,69,73,97,81,130,137,91,66,150,102,3728,	0,21957,23251,28074,29596,32529,33230,34660,42560,44319,44469,47526,51477,
#Partially deleted in new
chr12	121132851	121162430	chr12:121132851-121162430	0	+	121132970	121156097	789624	4	244,69,73,160,	0,23227,28050,29419,
#Partially deleted in new
chr12	121132901	121184677	chr12:121132901-121184677	0	+	121132901	121132901	789624	11	194,169,69,73,250,81,130,91,300,102,373,	0,21883,23177,28000,29369,32455,33156,42486,44245,47452,51403,
#Partially deleted in new
chr12	121132928	121166163	chr12:121132928-121166163	0	+	121132970	121156097	789624	5	167,69,97,81,106,	0,23150,29495,32428,33129,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	121132929	121186073	chr12:121132929-121186073	0	+	121132970	121165370	789624	12	166,169,69,73,81,130,137,91,66,150,102,1769,	0,21855,23149,27972,32427,33128,34558,42458,44217,44367,47424,51375,
#Partially deleted in new
chr12	121132970	121184802	chr12:121132970-121184802	0	+	121132970	121177269	789624	12	125,169,69,73,97,81,130,137,91,300,102,498,	0,21814,23108,27931,29453,32386,33087,34517,42417,44176,47383,51334,
#Partially deleted in new
chr12	121132970	121184802	chr12:121132970-121184802	0	+	121132970	121177269	789624	10	125,169,69,73,97,81,91,300,102,498,	0,21814,23108,27931,29453,32386,42417,44176,47383,51334,
#Partially deleted in new
chr12	121132970	121184802	chr12:121132970-121184802	0	+	121132970	121155325	789624	14	125,169,139,69,73,97,81,130,137,91,66,150,102,498,	0,21814,22265,23108,27931,29453,32386,33087,34517,42417,44176,44326,47383,51334,
#Partially deleted in new
chr12	121132970	121184802	chr12:121132970-121184802	0	+	121132970	121155325	789624	13	125,169,139,69,73,97,81,130,137,91,300,102,498,	0,21814,22265,23108,27931,29453,32386,33087,34517,42417,44176,47383,51334,
#Partially deleted in new
chr12	121132970	121184802	chr12:121132970-121184802	0	+	121132970	121162447	789624	11	125,169,69,97,81,130,91,66,150,102,498,	0,21814,23108,29453,32386,33087,42417,44176,44326,47383,51334,
#Partially deleted in new
chr12	121132970	121184802	chr12:121132970-121184802	0	+	121132970	121175420	789624	12	125,169,69,73,97,81,130,91,66,150,102,498,	0,21814,23108,27931,29453,32386,33087,42417,44176,44326,47383,51334,
#Partially deleted in new
chr12	121132970	121184802	chr12:121132970-121184802	0	+	121132970	121162447	789624	11	125,169,69,97,81,130,137,91,300,102,498,	0,21814,23108,29453,32386,33087,34517,42417,44176,47383,51334,
#Deleted in new
chr12	121149009	121149109	chr12:121149009-121149109	7	+	121149009	121149009	16724991	1	100,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	121190867	121191518	chr12:121190867-121191518	3	+	121190867	121190867	8553170	1	651,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	121209856	121234106	chr12:121209856-121234106	3	+	121210164	121233549	789624	12	442,148,72,73,97,81,142,137,94,66,96,584,	0,7277,12056,12237,13090,18676,18868,19106,22557,22754,23140,23666,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	121209860	121234104	chr12:121209860-121234104	1	+	121210164	121233657	789624	11	438,148,72,73,97,81,142,137,94,25,470,	0,7273,12052,12233,13086,18672,18864,19102,22553,22750,23774,
#Partially deleted in new
chr12	121210064	121234070	chr12:121210064-121234070	1	+	121210164	121233549	789624	13	234,48,148,72,73,97,81,142,137,94,66,96,548,	0,6890,7069,11848,12029,12882,18468,18660,18898,22349,22546,22932,23458,
#Partially deleted in new
chr12	121210116	121233547	chr12:121210116-121233547	0	+	121210116	121210116	8553170	10	182,148,72,73,81,142,137,94,482,25,	0,7017,11796,11977,18416,18608,18846,22297,22494,23406,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	121210128	121234104	chr12:121210128-121234104	0	+	121210128	121210128	8553170	11	170,148,72,950,177,81,142,137,94,66,1108,	0,7005,11784,11965,13129,18404,18596,18834,22285,22482,22868,
#Partially deleted in new
chr12	121210128	121228614	chr12:121210128-121228614	0	+	121210128	121210128	8553170	5	170,148,72,73,82,	0,7005,11784,11965,18404,
#Partially deleted in new
chr12	121210128	121233737	chr12:121210128-121233737	0	+	121210164	121222749	789624	13	170,148,72,73,38,97,81,142,137,94,66,96,215,	0,7005,11784,11965,12601,12818,18404,18596,18834,22285,22482,22868,23394,
#Partially deleted in new
chr12	121210128	121234106	chr12:121210128-121234106	0	+	121210164	121221937	789624	11	170,72,73,97,81,142,137,94,66,96,584,	0,11784,11965,12818,18404,18596,18834,22285,22482,22868,23394,
#Partially deleted in new
chr12	121210150	121229042	chr12:121210150-121229042	0	+	121210164	121229042	789624	4	148,81,142,80,	0,18382,18574,18812,
#Partially deleted in new
chr12	121210164	121233547	chr12:121210164-121233547	0	+	121210164	121233547	789624	12	134,148,72,73,16,81,142,137,94,66,96,25,	0,6969,11748,11929,12782,18368,18560,18798,22249,22446,22832,23358,
#Partially deleted in new
chr12	121210170	121232507	chr12:121210170-121232507	0	+	121210170	121210170	8553170	6	128,72,73,81,375,94,	0,11742,11923,18362,18554,22243,
#Partially deleted in new
chr12	121210234	121232508	chr12:121210234-121232508	0	+	121210234	121228546	789624	8	64,148,72,73,81,142,137,149,	0,6899,11678,11859,18298,18490,18728,22125,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	121212865	121223043	chr12:121212865-121223043	0	+	121212865	121212865	8553170	4	4416,72,73,97,	0,9047,9228,10081,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	121222331	121228811	chr12:121222331-121228811	0	+	121222331	121222331	8553170	3	712,81,87,	0,6201,6393,
#Partially deleted in new
chr12	121237690	121274531	chr12:121237690-121274531	1	-	121240467	121274526	0	16	2852,43,101,129,88,74,54,200,89,22,37,134,52,54,48,476,	0,6882,7449,10915,12096,12270,14970,15582,17859,18092,22628,26115,30947,31837,33207,36365,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr12	121237696	121298308	chr12:121237696-121298308	3	-	121240698	121274526	0	17	3173,43,101,129,88,74,54,200,89,22,37,134,52,54,48,530,770,	0,6876,7443,10909,12090,12264,14964,15576,17853,18086,22622,26109,30941,31831,33201,36359,59842,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	121237696	121298057	chr12:121237696-121298057	1	-	121240796	121274526	0	16	3173,101,129,88,74,54,200,89,22,37,134,52,54,48,530,519,	0,7443,10909,12090,12264,14964,15576,17853,18086,22622,26109,30941,31831,33201,36359,59842,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	121237696	121298057	chr12:121237696-121298057	1	-	121240698	121274526	0	16	3173,43,101,88,74,54,200,89,22,37,134,52,54,48,530,519,	0,6876,7443,12090,12264,14964,15576,17853,18086,22622,26109,30941,31831,33201,36359,59842,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	121237696	121298057	chr12:121237696-121298057	1	-	121240796	121274526	0	15	3173,101,88,74,54,200,89,22,37,134,52,54,48,530,519,	0,7443,12090,12264,14964,15576,17853,18086,22622,26109,30941,31831,33201,36359,59842,
#Partially deleted in new
chr12	121237769	121260542	chr12:121237769-121260542	1	-	121240467	121260475	789624	11	2773,43,101,129,88,74,54,200,89,22,224,	0,6803,7370,10836,12017,12191,14891,15503,17780,18013,22549,
#Partially deleted in new
chr12	121240524	121296753	chr12:121240524-121296753	1	-	121240698	121274526	0	17	345,43,101,129,88,74,54,200,89,22,37,134,52,54,48,530,116,	0,4048,4615,8081,9262,9436,12136,12748,15025,15258,19794,23281,28113,29003,30373,33531,56113,
#Partially deleted in new
chr12	121240524	121296686	chr12:121240524-121296686	1	-	121240796	121274526	0	16	345,101,129,88,74,54,200,89,22,37,134,52,54,48,530,49,	0,4615,8081,9262,9436,12136,12748,15025,15258,19794,23281,28113,29003,30373,33531,56113,
#Partially deleted in new
chr12	121240546	121296710	chr12:121240546-121296710	1	-	121240698	121274526	0	17	323,43,101,129,88,74,54,200,89,22,37,134,52,54,48,530,73,	0,4026,4593,8059,9240,9414,12114,12726,15003,15236,19772,23259,28091,28981,30351,33509,56091,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr12	121243587	121298308	chr12:121243587-121298308	1	-	121244123	121274526	0	17	542,43,101,129,88,74,54,200,89,22,37,134,52,54,48,530,770,	0,985,1552,5018,6199,6373,9073,9685,11962,12195,16731,20218,25050,25940,27310,30468,53951,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	121243587	121298057	chr12:121243587-121298057	1	-	121244123	121274526	0	16	542,43,101,88,74,54,200,89,22,37,134,52,54,48,530,519,	0,985,1552,6199,6373,9073,9685,11962,12195,16731,20218,25050,25940,27310,30468,53951,
#Partially deleted in new
chr12	121253260	121296687	chr12:121253260-121296687	0	-	121253260	121253260	8553170	4	212,25,522,50,	0,2289,20803,43377,
#Partially deleted in new
chr12	121263899	121274370	chr12:121263899-121274370	0	-	121263899	121263899	8553170	5	40,52,100,48,307,	0,4738,5628,6998,10164,
#Partially deleted in new
chr12	121274151	121297563	chr12:121274151-121297563	0	-	121274151	121274526	789624	2	434,129,	0,23283,
#Partially deleted in new
chr12	121274264	121297336	chr12:121274264-121297336	0	-	121274264	121274526	789624	2	321,222,	0,22850,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	121308244	121310394	chr12:121308244-121310394	0	-	121308244	121308244	8553170	2	447,694,	0,1456,
#Partially deleted in new
chr12	121308331	121335609	chr12:121308331-121335609	0	-	121308331	121308331	8553170	10	360,163,148,108,122,75,1402,90,82,77,	0,1369,9945,10169,11365,12053,18764,22251,23015,27201,
#Partially deleted in new
chr12	121308356	121352462	chr12:121308356-121352462	3	-	121308479	121352340	0	17	335,163,148,108,122,75,136,182,90,82,191,102,67,193,110,80,329,	0,1344,9920,10144,11340,12028,18739,19959,22226,22990,27176,28934,33646,37482,38539,39445,43777,
#Partially deleted in new
chr12	121308356	121347883	chr12:121308356-121347883	1	-	121308479	121346995	0	16	335,163,148,108,122,75,136,143,90,82,191,102,67,193,110,82,	0,1344,9920,10144,11340,12028,18739,19959,22226,22990,27176,28934,33646,37482,38539,39445,
#Partially deleted in new
chr12	121308356	121352304	chr12:121308356-121352304	0	-	121308356	121308356	8553170	14	335,163,42,332,122,75,136,182,191,102,67,1167,80,171,	0,1344,1613,9920,11340,12028,18739,19959,27176,28934,33646,37482,39445,43777,
#Partially deleted in new
chr12	121308356	121337393	chr12:121308356-121337393	0	-	121318304	121337393	789624	12	335,163,128,108,122,75,136,182,90,82,191,103,	0,1344,9920,10144,11340,12028,18739,19959,22226,22990,27176,28934,
#Partially deleted in new
chr12	121308356	121352388	chr12:121308356-121352388	1	-	121308479	121352340	789624	17	335,163,148,108,122,75,136,143,90,82,191,102,67,193,110,80,255,	0,1344,9920,10144,11340,12028,18739,19959,22226,22990,27176,28934,33646,37482,38539,39445,43777,
#Partially deleted in new
chr12	121308357	121331391	chr12:121308357-121331391	1	-	121308479	121330702	789624	9	334,163,148,108,122,75,136,182,809,	0,1343,9919,10143,11339,12027,18738,19958,22225,
#Partially deleted in new
chr12	121308357	121335682	chr12:121308357-121335682	0	-	121308357	121308357	8553170	10	334,163,148,108,122,75,136,182,90,150,	0,1343,9919,10143,11339,12027,18738,19958,22225,27175,
#Partially deleted in new
chr12	121317889	121337331	chr12:121317889-121337331	0	-	121317889	121317889	8553170	11	265,75,108,122,75,136,143,90,82,191,41,	0,387,611,1807,2495,9206,10426,12693,13457,17643,19401,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	121318534	121321111	chr12:121318534-121321111	0	-	121318534	121318534	8553170	3	74,122,727,	0,1162,1850,
#Partially deleted in new
chr12	121326352	121337367	chr12:121326352-121337367	0	-	121326352	121326352	8553170	7	290,136,182,90,82,191,77,	0,743,1963,4230,4994,9180,10938,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	121326485	121335172	chr12:121326485-121335172	0	-	121326485	121326485	8553170	3	157,1402,4590,	0,610,4097,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	121328256	121328835	chr12:121328256-121328835	0	-	121328256	121328256	8553170	2	202,63,	0,516,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	121328998	121337395	chr12:121328998-121337395	0	-	121328998	121328998	8553170	2	187,105,	0,8292,
#Partially deleted in new
chr12	121330582	121342071	chr12:121330582-121342071	0	-	121330582	121330582	8553170	5	90,202,191,102,69,	0,644,4950,6708,11420,
#Partially deleted in new
chr12	121335516	121347875	chr12:121335516-121347875	0	-	121335516	121335516	8553170	6	207,102,67,193,110,74,	0,1774,6486,10322,11379,12285,
#Partially deleted in new
chr12	121335532	121352385	chr12:121335532-121352385	0	-	121335532	121346995	789624	6	191,102,67,193,110,252,	0,1758,6470,10306,11363,16601,
#Partially deleted in new
chr12	121345839	121352417	chr12:121345839-121352417	0	-	121345839	121345839	8553170	5	112,91,110,80,284,	0,196,1056,1962,6294,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	121345923	121352395	chr12:121345923-121352395	0	-	121345923	121352340	789624	5	108,110,80,144,262,	0,972,1878,5136,6210,
#Partially deleted in new
chr12	121345998	121399896	chr12:121345998-121399896	0	-	121345998	121346995	789624	4	33,110,80,286,	0,897,1803,53612,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	121346794	121352327	chr12:121346794-121352327	0	-	121346794	121346794	8553170	2	1087,194,	0,5339,
#Partially deleted in new
chr12	121391961	121399859	chr12:121391961-121399859	3	+	121391961	121391961	8553170	2	268,284,	0,7614,
#Partially deleted in new
chr12	121400040	121424351	chr12:121400040-121424351	1	+	121400212	121423576	789624	6	178,219,408,93,202,966,	0,16118,17463,20201,20536,23345,
#Partially deleted in new
chr12	121400082	121424352	chr12:121400082-121424352	1	+	121400212	121423576	789624	5	136,51,93,202,967,	0,17778,20159,20494,23303,
#Partially deleted in new
chr12	121400118	121424348	chr12:121400118-121424348	3	+	121402798	121423576	789624	7	100,66,219,408,93,202,963,	0,2623,16040,17385,20123,20458,23267,
#Partially deleted in new
chr12	121400127	121416609	chr12:121400127-121416609	0	+	121400127	121400127	8553170	2	91,451,	0,16031,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	121400128	121418740	chr12:121400128-121418740	0	+	121400128	121400128	8553170	4	90,66,219,1237,	0,2613,16030,17375,
#Partially deleted in new
chr12	121400141	121417789	chr12:121400141-121417789	0	+	121416173	121417789	789624	5	77,66,265,219,286,	0,2600,4707,16017,17362,
#Partially deleted in new
chr12	121400143	121430623	chr12:121400143-121430623	1	+	121400212	121430494	789624	7	75,219,408,93,202,132,593,	0,16015,17360,20098,20433,23242,29887,
#Partially deleted in new
chr12	121400146	121423906	chr12:121400146-121423906	1	+	121400212	121423517	789624	2	72,521,	0,23239,
#Partially deleted in new
chr12	121409454	121417521	chr12:121409454-121417521	0	+	121416173	121417521	789624	3	222,219,18,	0,6704,8049,
#Partially deleted in new
chr12	121409474	121416286	chr12:121409474-121416286	0	+	121416173	121416286	789624	2	303,128,	0,6684,
#Partially deleted in new
chr12	121419897	121424349	chr12:121419897-121424349	0	+	121419897	121419897	8553170	3	437,202,964,	0,679,3488,
#Partially deleted in new
chr12	121429096	121580459	chr12:121429096-121580459	1	-	121430115	121580052	0	23	1067,128,219,162,164,680,39,261,87,144,225,87,473,127,116,154,94,107,179,47,79,145,440,	0,1245,10760,11719,11973,13060,13895,14915,15353,16178,24023,65482,80470,84179,91888,103709,105400,119780,120363,145450,146684,149705,150923,
#Partially deleted in new
chr12	121429098	121581015	chr12:121429098-121581015	1	-	121430397	121574592	0	14	1371,225,87,473,127,116,154,94,107,179,47,79,145,230,	0,24021,65480,80468,84177,91886,103707,105398,119778,120361,145448,146682,149703,151687,
#Partially deleted in new
chr12	121429508	121549639	chr12:121429508-121549639	0	-	121429508	121429508	8553170	15	961,1121,164,1637,261,969,225,87,473,127,116,154,94,107,180,	0,10348,11561,12648,14503,14941,23611,65070,80058,83767,91476,103297,104988,119368,119951,
#Partially deleted in new
chr12	121429508	121509706	chr12:121429508-121509706	1	-	121430287	121453182	789624	14	655,193,219,162,164,680,39,114,261,87,144,225,87,140,	0,768,10348,11307,11561,12648,13483,14171,14503,14941,15766,23611,65070,80058,
#Partially deleted in new
chr12	121429776	121580984	chr12:121429776-121580984	3	-	121430287	121580911	0	23	693,219,162,164,680,39,114,261,87,144,225,87,473,127,116,154,94,107,179,47,79,145,199,	0,10080,11039,11293,12380,13215,13903,14235,14673,15498,23343,64802,79790,83499,91208,103029,104720,119100,119683,144770,146004,149025,151009,
#Partially deleted in new
chr12	121429870	121580954	chr12:121429870-121580954	1	-	121430468	121580911	789624	16	599,17,144,225,87,473,127,116,154,94,107,179,47,79,145,169,	0,9986,15404,23249,64708,79696,83405,91114,102935,104626,119006,119589,144676,145910,148931,150915,
#Partially deleted in new
chr12	121429870	121580954	chr12:121429870-121580954	0	-	121574549	121580911	789624	13	599,225,87,473,127,116,154,94,107,179,47,145,169,	0,23249,64708,79696,83405,91114,102935,104626,119006,119589,144676,148931,150915,
#Deleted in new
chr12	121439912	121441244	chr12:121439912-121441244	0	-	121439912	121439912	8553170	3	163,162,175,	0,903,1157,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	121444014	121470553	chr12:121444014-121470553	0	-	121444014	121444014	8553170	5	258,87,144,225,3396,	0,435,1260,9105,23143,
#Deleted in new
chr12	121444272	121444352	chr12:121444272-121444352	3	-	121444272	121444272	5263520	1	80,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	121493845	121581015	chr12:121493845-121581015	1	-	121494518	121580911	789624	10	820,473,127,94,107,179,47,79,145,230,	0,15721,19430,40651,55031,55614,80701,81935,84956,86940,
#Partially deleted in new
chr12	121509571	121579644	chr12:121509571-121579644	0	-	121509571	121579626	789624	11	468,127,116,154,94,107,179,47,79,145,33,	0,3704,11413,23234,24925,39305,39888,64975,66209,69230,70040,
#Partially deleted in new
chr12	121509942	121524795	chr12:121509942-121524795	0	-	121509942	121524712	789624	4	97,127,116,120,	0,3333,11042,14733,
#Partially deleted in new
chr12	121510006	121536069	chr12:121510006-121536069	0	-	121510006	121534580	789624	6	33,127,116,154,94,50,	0,3269,10978,22799,24490,26013,
#Partially deleted in new
chr12	121513292	121534660	chr12:121513292-121534660	0	-	121513292	121534580	789624	4	110,116,154,164,	0,7692,19513,21204,
#Partially deleted in new
chr12	121513327	121536128	chr12:121513327-121536128	0	-	121513327	121516518	789624	6	75,52,116,154,94,109,	0,3141,7657,19478,21169,22692,
#Partially deleted in new
chr12	121516346	121537616	chr12:121516346-121537616	1	-	121516845	121534580	789624	5	517,116,154,94,307,	0,4638,16459,18150,20963,
#Partially deleted in new
chr12	121521045	121536235	chr12:121521045-121536235	0	-	121521045	121534580	789624	4	55,154,94,225,	0,11760,13451,14965,
#Partially deleted in new
chr12	121532845	121580225	chr12:121532845-121580225	0	-	121532845	121574592	789624	7	114,94,107,179,47,145,206,	0,1651,16031,16614,41701,45956,47174,
#Deleted in new
chr12	121574364	121580140	chr12:121574364-121580140	0	-	121574364	121574364	8553170	4	229,79,145,121,	0,1416,4437,5655,
#Partially deleted in new
chr12	121580791	121593504	chr12:121580791-121593504	3	+	121580791	121580791	8553170	2	472,72,	0,12641,
#Partially deleted in new
chr12	121604901	121605012	chr12:121604901-121605012	3	+	121604901	121604901	8553170	1	111,	0,
#Partially deleted in new
chr12	121626549	121642040	chr12:121626549-121642040	3	+	121626742	121641643	0	3	316,180,1000,	0,321,14491,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	121626549	121642677	chr12:121626549-121642677	0	+	121626549	121626549	8553170	2	501,1637,	0,14491,
#Partially deleted in new
chr12	121626815	121641533	chr12:121626815-121641533	0	+	121626815	121626815	8553170	2	359,493,	0,14225,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	121648741	121669654	chr12:121648741-121669654	3	-	121652733	121669483	789624	6	2903,81,185,160,158,316,	0,3986,4333,5532,10449,20597,
#Partially deleted in new
chr12	121651391	121669650	chr12:121651391-121669650	0	-	121652788	121669483	789624	5	253,81,160,158,312,	0,1336,2882,7799,17947,
#Partially deleted in new
chr12	121651391	121672631	chr12:121651391-121672631	0	-	121652788	121669483	789624	6	253,81,160,158,174,53,	0,1336,2882,7799,17947,21187,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	121712751	121778956	chr12:121712751-121778956	0	+	121712895	121775722	789624	13	213,119,117,60,96,90,66,62,93,65,69,836,880,	0,30877,35574,37628,39376,48897,58155,58736,60669,61906,62310,62857,65325,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	121712794	121782062	chr12:121712794-121782062	3	+	121712895	121775722	789624	12	170,119,117,60,96,90,66,62,93,65,69,6454,	0,30834,35531,37585,39333,48854,58112,58693,60626,61863,62267,62814,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	121743622	121777789	chr12:121743622-121777789	0	+	121743622	121775096	789624	10	125,117,60,96,90,66,62,93,69,2181,	0,4703,6757,8505,18026,27284,27865,29798,31439,31986,
#Partially deleted in new
chr12	121752128	121776158	chr12:121752128-121776158	1	+	121775114	121775871	789624	6	95,90,93,65,69,550,	0,9520,21292,22529,22933,23480,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	121776262	121780750	chr12:121776262-121780750	0	+	121776262	121776262	8553170	3	182,51,299,	0,1814,4189,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	121776283	121778356	chr12:121776283-121778356	0	+	121776283	121776283	8553170	2	161,280,	0,1793,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	121776374	121783001	chr12:121776374-121783001	0	+	121776374	121776374	8553170	6	70,1076,51,75,202,970,	0,447,1702,3174,4566,5657,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	121777753	121794262	chr12:121777753-121794262	3	-	121779497	121793633	789624	5	1909,135,110,88,767,	0,3118,3329,15398,15742,
#Partially deleted in new
chr12	121779417	121793360	chr12:121779417-121793360	1	-	121779497	121781118	789624	4	245,135,110,209,	0,1454,1665,13734,
#Partially deleted in new
chr12	121779607	121800677	chr12:121779607-121800677	0	-	121779607	121781118	789624	5	55,135,110,88,831,	0,1264,1475,13544,20239,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	121780486	121794262	chr12:121780486-121794262	1	-	121780829	121793633	789624	4	520,110,88,767,	0,596,12665,13009,
#Partially deleted in new
chr12	121780951	121802928	chr12:121780951-121802928	0	-	121780951	121781118	789624	6	55,110,88,110,1213,50,	0,131,12200,18895,20620,21927,
#Partially deleted in new
chr12	121781079	121794355	chr12:121781079-121794355	0	-	121781079	121793633	789624	4	113,88,346,123,	0,12072,12416,13153,
#Partially deleted in new
chr12	121793150	121803403	chr12:121793150-121803403	0	-	121793150	121793150	8553170	4	89,110,102,525,	0,6696,8556,9728,
#Partially deleted in new
chr12	121795266	121803484	chr12:121795266-121803484	1	-	121795266	121795266	789624	7	460,52,110,37,102,154,606,	0,924,4580,6305,6440,7364,7612,
#Partially deleted in new
chr12	121795266	121802910	chr12:121795266-121802910	1	-	121795266	121795266	789624	4	976,110,102,32,	0,4580,6440,7612,
#Partially deleted in new
chr12	121795569	121801007	chr12:121795569-121801007	0	-	121795569	121795569	8553170	4	157,52,110,160,	0,621,4277,5278,
#Partially deleted in new
chr12	121795639	121802933	chr12:121795639-121802933	2	-	121795639	121795639	8553170	5	603,110,102,154,55,	0,4207,6067,6991,7239,
#Partially deleted in new
chr12	121795892	121802943	chr12:121795892-121802943	0	-	121795892	121795892	8553170	4	350,110,102,313,	0,3954,5814,6738,
#Partially deleted in new
chr12	121795989	121802402	chr12:121795989-121802402	0	-	121795989	121795989	8553170	3	253,110,696,	0,3857,5717,
#Partially deleted in new
chr12	121797510	121801972	chr12:121797510-121801972	3	+	121797510	121797510	8553170	2	362,210,	0,4252,
#Deleted in new
chr12	121799171	121802946	chr12:121799171-121802946	0	-	121799171	121799171	8553170	4	486,110,102,316,	0,675,2535,3459,
#Deleted in new
chr12	121799383	121802604	chr12:121799383-121802604	1	-	121799383	121799383	8553170	3	274,110,898,	0,463,2323,
#Deleted in new
chr12	121799430	121801442	chr12:121799430-121801442	0	-	121799430	121799430	8553170	3	227,110,143,	0,416,1869,
#Deleted in new
chr12	121799552	121802945	chr12:121799552-121802945	1	-	121799552	121799552	8553170	5	105,110,102,176,67,	0,294,2154,3078,3326,
#Deleted in new
chr12	121799755	121802886	chr12:121799755-121802886	0	-	121799755	121799755	8553170	3	201,102,256,	0,1951,2875,
#Deleted in new
chr12	121799848	121803906	chr12:121799848-121803906	1	-	121799848	121799848	8553170	4	108,102,43,377,	0,1858,3358,3681,
#Deleted in new
chr12	121800796	121803403	chr12:121800796-121803403	3	+	121800796	121800796	8553170	1	2607,	0,
#Partially deleted in new
chr12	121804179	121832584	chr12:121804179-121832584	3	+	121804737	121830239	0	18	54,188,99,271,113,1233,825,262,149,57,106,492,1260,167,132,120,138,2519,	0,544,938,1655,4028,5423,9926,12853,13190,13417,13619,15224,18310,21020,23339,23555,23753,25886,
#Partially deleted in new
chr12	121804179	121830239	chr12:121804179-121830239	1	+	121804737	121830239	0	17	54,188,99,271,113,1233,825,262,335,106,492,1260,167,132,120,138,174,	0,544,938,1655,4028,5423,9926,12853,13190,13619,15224,18310,21020,23339,23555,23753,25886,
#Partially deleted in new
chr12	121804737	121830239	chr12:121804737-121830239	1	+	121804737	121830239	789624	17	174,99,271,113,1233,825,262,146,60,106,492,1260,167,132,120,138,174,	0,380,1097,3470,4865,9368,12295,12632,12856,13061,14666,17752,20462,22781,22997,23195,25328,
#Partially deleted in new
chr12	121804737	121830239	chr12:121804737-121830239	1	+	121804737	121830239	0	16	174,99,271,113,1233,825,262,335,106,492,1260,167,132,120,138,174,	0,380,1097,3470,4865,9368,12295,12632,13061,14666,17752,20462,22781,22997,23195,25328,
#Partially deleted in new
chr12	121839526	121858859	chr12:121839526-121858859	3	-	121839727	121858823	789624	14	312,117,123,72,163,78,104,90,83,43,105,63,27,39,	0,405,4183,7335,7525,9472,10160,15176,16797,17056,17801,18230,19160,19294,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	121839529	121863596	chr12:121839529-121863596	1	-	121839727	121857408	789624	15	309,117,123,72,163,78,104,90,83,43,105,63,27,267,65,	0,402,4180,7332,7522,9469,10157,15173,16794,17053,17798,18227,19157,19395,24002,
#Partially deleted in new
chr12	121848998	121857583	chr12:121848998-121857583	0	-	121848998	121848998	8553170	6	78,252,90,83,21,256,	0,688,5704,7325,7584,8329,
#Deleted in new
chr12	121856258	121857059	chr12:121856258-121857059	3	+	121856258	121856258	8553170	3	134,164,136,	0,224,665,
#Partially deleted in new
chr12	121856597	121858855	chr12:121856597-121858855	0	-	121856597	121856597	8553170	4	28,492,27,35,	0,730,2089,2223,
#Deleted in new
chr12	121874192	121874337	chr12:121874192-121874337	3	+	121874192	121874192	8553170	1	145,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	121888730	121918297	chr12:121888730-121918297	3	+	121888856	121916311	789624	6	264,103,212,102,89,2014,	0,6008,10903,14275,27125,27553,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	121888731	121916644	chr12:121888731-121916644	0	+	121888856	121915865	789624	7	263,103,212,102,65,89,361,	0,6007,10902,14274,22210,27124,27552,
#Partially deleted in new
chr12	121888761	121916549	chr12:121888761-121916549	0	+	121888856	121903022	789624	5	233,103,102,89,266,	0,5977,14244,27094,27522,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	121888770	121917863	chr12:121888770-121917863	1	+	121888856	121916311	789624	6	224,103,212,102,86,1580,	0,5968,10863,14235,27088,27513,
#Partially deleted in new
chr12	121888783	121899853	chr12:121888783-121899853	0	+	121888856	121899853	789624	3	211,103,220,	0,5955,10850,
#Partially deleted in new
chr12	121888785	121916399	chr12:121888785-121916399	1	+	121888856	121916311	789624	4	209,102,89,116,	0,14220,27070,27498,
#Partially deleted in new
chr12	121888808	121921470	chr12:121888808-121921470	3	+	121888856	121903022	789624	4	186,103,102,185,	0,5930,14197,32477,
#Partially deleted in new
chr12	121888844	121916584	chr12:121888844-121916584	0	+	121888856	121903048	789624	6	150,103,256,102,89,301,	0,5894,10789,14161,27011,27439,
#Partially deleted in new
chr12	121893816	121916584	chr12:121893816-121916584	0	+	121894753	121903048	789624	5	1025,256,102,89,301,	0,5817,9189,22039,22467,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	121897270	121916568	chr12:121897270-121916568	0	+	121897270	121897270	8553170	4	2575,102,89,285,	0,5735,18585,19013,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	121897582	121897826	chr12:121897582-121897826	3	-	121897582	121897582	8553170	1	244,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	121902047	121916615	chr12:121902047-121916615	0	+	121902047	121902047	8553170	3	1060,89,332,	0,13808,14236,
#Deleted in new
chr12	121908102	121908163	chr12:121908102-121908163	3	+	121908102	121908102	8553170	1	61,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	121914217	121916643	chr12:121914217-121916643	0	+	121914217	121914217	8553170	2	1727,360,	0,2066,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	121915332	121921391	chr12:121915332-121921391	0	+	121915332	121915332	8553170	2	1255,106,	0,5953,
#Partially deleted in new
chr12	121917861	122003927	chr12:121917861-122003927	3	+	121921305	122003764	789624	22	834,398,369,141,110,112,81,78,51,215,195,251,152,174,185,115,164,91,144,229,102,276,	0,3424,5760,13884,16385,24672,25033,31122,33618,36258,39212,40410,41081,42723,44116,49093,50144,57382,57680,81854,83635,85790,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr12	121918591	121972069	chr12:121918591-121972069	1	+	121921305	121971612	789624	18	117,398,369,141,110,112,81,78,51,215,195,251,152,174,185,115,164,512,	0,2694,5030,13154,15655,23942,24303,30392,32888,35528,38482,39680,40351,41993,43386,48363,49414,52966,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	121921407	121933655	chr12:121921407-121933655	0	+	121921407	121921407	8553170	3	276,369,1910,	0,2214,10338,
#Partially deleted in new
chr12	121934249	121949211	chr12:121934249-121949211	0	+	121934249	121934249	8553170	4	107,112,81,228,	0,8284,8645,14734,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	121947668	121959089	chr12:121947668-121959089	0	+	121947668	121947668	8553170	5	3862,220,195,251,147,	0,8030,9405,10603,11274,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	121952694	121959739	chr12:121952694-121959739	0	+	121952694	121952694	8553170	4	1640,195,251,797,	0,4379,5577,6248,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	121961993	121969966	chr12:121961993-121969966	0	+	121961993	121961993	8553170	4	169,115,164,285,	0,4961,6012,7688,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	121996885	122003807	chr12:121996885-122003807	0	+	121996885	121996885	8553170	3	3059,102,156,	0,4611,6766,
#Partially deleted in new
chr12	122001703	122003927	chr12:122001703-122003927	0	+	122001703	122001703	8553170	2	216,276,	0,1948,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	122007433	122020014	chr12:122007433-122020014	3	-	122007433	122007433	8553170	2	501,315,	0,12266,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	122019421	122062044	chr12:122019421-122062044	1	+	122022091	122059163	789624	6	2762,82,97,168,185,2953,	0,11278,15909,24464,35383,39670,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	122019421	122020063	chr12:122019421-122020063	1	-	122019421	122019421	8553170	1	642,	0,
#Partially deleted in new
chr12	122021885	122060905	chr12:122021885-122060905	3	+	122022091	122059163	789624	6	298,82,97,168,122,1814,	0,8814,13445,22000,32919,37206,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	122021977	122044371	chr12:122021977-122044371	0	+	122021977	122021977	8553170	4	206,82,97,486,	0,8722,13353,21908,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	122063305	122068616	chr12:122063305-122068616	3	+	122063305	122063305	789624	4	226,133,164,328,	0,1244,4722,4983,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	122063348	122064658	chr12:122063348-122064658	1	+	122063348	122063348	8553170	3	183,295,109,	0,790,1201,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	122064356	122065822	chr12:122064356-122065822	1	+	122064356	122064356	8553170	2	326,567,	0,899,
#Deleted in new
chr12	122068025	122068558	chr12:122068025-122068558	0	+	122068025	122068025	8553170	2	166,270,	0,263,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr12	122078721	122147347	chr12:122078721-122147347	3	+	122078853	122141812	789624	17	545,107,86,90,42,172,90,92,640,122,178,122,102,128,124,130,5657,	0,48534,49161,50415,50866,51219,52122,53570,54626,56502,56767,58747,59472,59702,60093,62232,62969,
#Deleted in new
chr12	122127879	122130901	chr12:122127879-122130901	0	+	122129949	122130901	789624	4	1347,42,172,58,	0,1708,2061,2964,
#Partially deleted in new
chr12	122127887	122134164	chr12:122127887-122134164	0	+	122127887	122127887	8553170	7	81,90,42,172,90,92,817,	0,1249,1700,2053,2956,4404,5460,
#Deleted in new
chr12	122129179	122130005	chr12:122129179-122130005	0	+	122129179	122129179	8553170	2	47,418,	0,408,
#Partially deleted in new
chr12	122129941	122134164	chr12:122129941-122134164	0	+	122129941	122129941	8553170	3	171,90,817,	0,902,3406,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	122132524	122144418	chr12:122132524-122144418	1	+	122133434	122141812	789624	9	1463,122,178,122,102,128,124,130,2728,	0,2699,2964,4944,5669,5899,6290,8429,9166,
#Deleted in new
chr12	122133297	122134156	chr12:122133297-122134156	1	+	122133434	122134142	789624	2	232,573,	0,286,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	122133670	122138484	chr12:122133670-122138484	0	+	122133670	122133670	8553170	4	317,122,2102,294,	0,1553,1818,4520,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	122134320	122138941	chr12:122134320-122138941	0	+	122135078	122138941	789624	6	1025,178,122,102,128,127,	0,1168,3148,3873,4103,4494,
#Deleted in new
chr12	122135234	122135551	chr12:122135234-122135551	0	+	122135234	122135234	8553170	2	111,98,	0,219,
#Partially deleted in new
chr12	122135627	122140948	chr12:122135627-122140948	0	+	122135627	122140948	789624	5	39,122,102,128,122,	0,1841,2566,2796,5199,
#Partially deleted in new
chr12	122167737	122191474	chr12:122167737-122191474	0	+	122187733	122191474	789624	6	45,261,111,140,239,95,	0,16781,18452,19963,22392,23642,
#Partially deleted in new
chr12	122172029	122174199	chr12:122172029-122174199	3	-	122172411	122174172	789624	3	712,149,43,	0,1814,2127,
#Partially deleted in new
chr12	122183001	122187926	chr12:122183001-122187926	0	+	122183001	122183001	8553170	4	71,261,111,226,	0,1517,3188,4699,
#Partially deleted in new
chr12	122183116	122203471	chr12:122183116-122203471	3	+	122183144	122203442	789624	12	178,261,111,140,239,188,260,142,129,189,34,157,	0,1402,3073,4584,7013,8263,9628,17072,17415,17629,18179,20198,
#Partially deleted in new
chr12	122183125	122200778	chr12:122183125-122200778	0	+	122183125	122183125	8553170	4	169,261,129,33,	0,1393,17406,17620,
#Partially deleted in new
chr12	122184518	122187477	chr12:122184518-122187477	0	+	122184518	122184518	8553170	3	261,111,100,	0,1671,2859,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	122200591	122202423	chr12:122200591-122202423	0	+	122200591	122200591	8553170	4	69,189,34,445,	0,154,704,1387,
#Partially deleted in new
chr12	122203542	122207537	chr12:122203542-122207537	3	+	122204618	122207388	789624	3	259,163,1220,	0,979,2775,
#Partially deleted in new
chr12	122203680	122208945	chr12:122203680-122208945	1	+	122206326	122207388	789624	2	121,2628,	0,2637,
#Partially deleted in new
chr12	122203728	122208952	chr12:122203728-122208952	0	+	122203728	122203728	8553170	3	73,117,473,	0,3967,4751,
#Partially deleted in new
chr12	122203745	122207062	chr12:122203745-122207062	1	+	122204618	122206831	789624	3	56,163,333,	0,776,2984,
#Partially deleted in new
chr12	122203772	122207147	chr12:122203772-122207147	0	+	122203772	122203772	8553170	2	29,418,	0,2957,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	122204599	122207537	chr12:122204599-122207537	1	+	122206326	122207388	789624	1	2938,	0,
#Partially deleted in new
chr12	122207661	122227534	chr12:122207661-122227534	1	-	122226429	122226564	789624	7	916,97,111,132,133,689,179,	0,8826,9097,10604,16850,18303,19694,
#Partially deleted in new
chr12	122207662	122226568	chr12:122207662-122226568	1	-	122208380	122218361	789624	5	915,97,111,132,604,	0,8825,9096,10603,18302,
#Partially deleted in new
chr12	122207662	122227534	chr12:122207662-122227534	3	-	122208380	122226014	0	7	915,97,111,132,133,689,179,	0,8825,9096,10603,16849,18302,19693,
#Partially deleted in new
chr12	122207667	122226052	chr12:122207667-122226052	3	-	122208380	122226014	0	6	910,97,111,132,133,88,	0,8820,9091,10598,16844,18297,
#Partially deleted in new
chr12	122207668	122226052	chr12:122207668-122226052	1	-	122208380	122226014	0	5	909,97,111,133,88,	0,8819,9090,16843,18296,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	122207766	122226062	chr12:122207766-122226062	0	-	122207766	122207766	8553170	5	811,97,111,132,1418,	0,8721,8992,10499,16878,
#Partially deleted in new
chr12	122207773	122226052	chr12:122207773-122226052	0	-	122224657	122226014	789624	6	804,97,111,132,104,88,	0,8714,8985,10492,16871,18191,
#Partially deleted in new
chr12	122207778	122266423	chr12:122207778-122266423	3	-	122218374	122266408	789624	16	799,97,111,132,102,169,138,138,68,127,194,175,187,128,66,117,	0,8709,8980,10487,24547,25021,28007,30808,32099,34603,36790,42092,53482,55793,56355,58528,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	122207787	122226022	chr12:122207787-122226022	0	-	122207787	122207787	8553170	5	790,97,111,132,1511,	0,8700,8971,10478,16724,
#Partially deleted in new
chr12	122207793	122226039	chr12:122207793-122226039	1	-	122208556	122226014	789624	7	784,86,97,111,132,133,75,	0,1979,8694,8965,10472,16718,18171,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	122207803	122217789	chr12:122207803-122217789	0	-	122207803	122207803	8553170	3	774,97,1031,	0,8684,8955,
#Partially deleted in new
chr12	122207818	122226022	chr12:122207818-122226022	0	-	122224608	122226014	789624	6	759,97,111,132,133,197,	0,8669,8940,10447,16693,18007,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	122207841	122222556	chr12:122207841-122222556	0	-	122207841	122207841	8553170	5	736,97,111,132,2027,	0,8646,8917,10424,12688,
#Partially deleted in new
chr12	122208315	122218289	chr12:122208315-122218289	0	-	122209706	122218289	789624	5	262,162,97,111,24,	0,1381,8172,8443,9950,
#Partially deleted in new
chr12	122208409	122226039	chr12:122208409-122226039	0	-	122224657	122226014	789624	5	168,97,111,104,75,	0,8078,8349,16235,17555,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	122208411	122218695	chr12:122208411-122218695	0	-	122208411	122208411	8553170	4	166,97,111,430,	0,8076,8347,9854,
#Partially deleted in new
chr12	122208505	122225973	chr12:122208505-122225973	0	-	122224608	122225973	789624	6	72,97,111,132,133,187,	0,7982,8253,9760,16006,17281,
#Partially deleted in new
chr12	122208710	122226009	chr12:122208710-122226009	0	-	122208710	122226009	789624	6	55,97,111,132,133,45,	0,7777,8048,9555,15801,17254,
#Deleted in new
chr12	122226215	122227533	chr12:122226215-122227533	1	-	122226429	122226564	789624	2	353,178,	0,1140,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	122229563	122266521	chr12:122229563-122266521	3	-	122232245	122266408	0	13	2864,169,138,138,68,127,194,175,117,187,128,66,215,	0,3236,6222,9023,10314,12818,15005,20307,21419,31697,34008,34570,36743,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	122231562	122266336	chr12:122231562-122266336	0	-	122264792	122266336	789624	14	865,169,138,138,68,127,194,175,117,187,128,66,93,30,	0,1237,4223,7024,8315,10819,13006,18308,19420,29698,32009,32571,33149,34744,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	122231885	122266433	chr12:122231885-122266433	1	-	122232245	122266408	789624	14	542,169,138,138,68,123,127,194,175,117,187,128,66,127,	0,914,3900,6701,7992,9123,10496,12683,17985,19097,29375,31686,32248,34421,
#Partially deleted in new
chr12	122232138	122266439	chr12:122232138-122266439	0	-	122265698	122266408	789624	14	289,169,138,138,68,127,194,175,117,187,128,66,90,133,	0,661,3647,6448,7739,10243,12430,17732,18844,29122,31433,31995,33497,34168,
#Partially deleted in new
chr12	122232818	122249970	chr12:122232818-122249970	0	-	122232818	122249970	789624	5	150,138,138,68,100,	0,2967,5768,7059,17052,
#Partially deleted in new
chr12	122242430	122250165	chr12:122242430-122250165	0	-	122242430	122242430	8553170	3	78,194,295,	0,2138,7440,
#Partially deleted in new
chr12	122242495	122251036	chr12:122242495-122251036	0	-	122242495	122251036	789624	4	13,194,175,78,	0,2073,7375,8463,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	122248095	122266431	chr12:122248095-122266431	0	-	122248095	122248095	8553170	6	1950,117,187,128,66,125,	0,2887,13165,15476,16038,18211,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	122252861	122266416	chr12:122252861-122266416	1	-	122253465	122266408	789624	5	682,187,128,66,110,	0,8399,10710,11272,13445,
#Partially deleted in new
chr12	122271431	122422588	chr12:122271431-122422588	1	-	122272874	122380452	789624	24	1669,125,50,151,118,53,121,107,117,216,166,157,84,58,117,717,61,104,198,223,125,572,191,68,	0,2606,6722,7360,7596,17057,38330,45317,47800,56515,56829,61555,62595,63216,65200,69549,81294,83021,83683,89527,92551,105957,108936,151089,
#Partially deleted in new
chr12	122271433	122380560	chr12:122271433-122380560	1	-	122272874	122380452	0	24	1667,125,50,151,118,53,121,107,117,216,166,157,84,58,117,945,105,61,104,198,223,125,572,193,	0,2604,6720,7358,7594,17055,38328,45315,47798,56513,56827,61553,62593,63214,65198,69319,75941,81292,83019,83681,89525,92549,105955,108934,
#Partially deleted in new
chr12	122271433	122422569	chr12:122271433-122422569	3	-	122272874	122380452	0	25	1667,125,50,151,118,53,121,107,117,216,166,157,84,58,117,945,105,61,104,198,223,125,572,191,49,	0,2604,6720,7358,7594,17055,38328,45315,47798,56513,56827,61553,62593,63214,65198,69319,75941,81292,83019,83681,89525,92549,105955,108934,151087,
#Partially deleted in new
chr12	122271433	122364017	chr12:122271433-122364017	0	-	122272874	122364017	789624	21	1667,125,50,151,118,53,121,107,117,216,166,157,84,58,717,105,61,104,198,223,35,	0,2604,6720,7358,7594,17055,38328,45315,47798,56513,56827,61553,62593,63214,69547,75941,81292,83019,83681,89525,92549,
#Partially deleted in new
chr12	122271433	122422569	chr12:122271433-122422569	1	-	122272874	122380452	0	26	1667,125,50,151,118,53,121,107,117,216,166,157,84,58,117,945,105,33,61,104,198,223,125,572,191,49,	0,2604,6720,7358,7594,17055,38328,45315,47798,56513,56827,61553,62593,63214,65198,69319,75941,79677,81292,83019,83681,89525,92549,105955,108934,151087,
#Partially deleted in new
chr12	122272042	122422632	chr12:122272042-122422632	1	-	122272874	122380452	0	24	1058,125,50,151,118,53,121,107,117,216,166,157,84,58,117,945,61,104,198,223,125,572,191,112,	0,1995,6111,6749,6985,16446,37719,44706,47189,55904,56218,60944,61984,62605,64589,68710,80683,82410,83072,88916,91940,105346,108325,150478,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	122272460	122275823	chr12:122272460-122275823	0	-	122272460	122272460	8553170	2	640,1786,	0,1577,
#Partially deleted in new
chr12	122272598	122279145	chr12:122272598-122279145	0	-	122274140	122279145	8553170	5	502,106,50,151,118,	0,1439,5555,6193,6429,
#Partially deleted in new
chr12	122272660	122341256	chr12:122272660-122341256	0	-	122272874	122341256	8553170	17	440,125,6,50,151,118,53,121,107,117,216,166,157,84,58,117,504,	0,1377,3778,5493,6131,6367,15828,37101,44088,46571,55286,55600,60326,61366,61987,63971,68092,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	122272667	122278472	chr12:122272667-122278472	0	-	122272667	122272667	8553170	3	433,125,2034,	0,1370,3771,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	122272805	122280878	chr12:122272805-122280878	0	-	122272805	122272805	8553170	5	295,125,50,151,1851,	0,1232,5348,5986,6222,
#Partially deleted in new
chr12	122272833	122380494	chr12:122272833-122380494	1	-	122272874	122380452	0	25	267,125,50,151,118,53,121,107,117,216,166,157,84,58,117,945,105,33,61,104,198,223,125,572,127,	0,1204,5320,5958,6194,15655,36928,43915,46398,55113,55427,60153,61193,61814,63798,67919,74541,78277,79892,81619,82281,88125,91149,104555,107534,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	122277367	122280058	chr12:122277367-122280058	0	-	122277367	122277367	8553170	3	836,151,1031,	0,1424,1660,
#Partially deleted in new
chr12	122319231	122328162	chr12:122319231-122328162	0	-	122319231	122328162	8553170	3	117,2268,216,	0,2882,8715,
#Partially deleted in new
chr12	122332986	122395427	chr12:122332986-122395427	0	-	122332986	122380452	789624	13	157,84,58,117,717,105,61,104,223,125,572,191,38,	0,1040,1661,3645,7994,14388,19739,21466,27972,30996,44402,47381,62403,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	122334084	122344044	chr12:122334084-122344044	0	-	122334084	122334084	8553170	4	26,58,117,3292,	0,563,2547,6668,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	122341087	122356160	chr12:122341087-122356160	0	-	122341087	122341087	8553170	3	610,61,1708,	0,11638,13365,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	122351027	122395997	chr12:122351027-122395997	0	-	122351027	122351027	8553170	8	116,61,104,223,125,572,191,608,	0,1698,3425,9931,12955,26361,29340,44362,
#Partially deleted in new
chr12	122354909	122380559	chr12:122354909-122380559	0	-	122360910	122380452	789624	5	403,366,125,572,192,	0,5906,9073,22479,25458,
#Partially deleted in new
chr12	122364781	122365632	chr12:122364781-122365632	7	+	122364781	122364781	16724991	2	109,367,	0,484,
#Partially deleted in new
chr12	122377720	122400014	chr12:122377720-122400014	0	-	122377720	122380452	789624	3	240,191,234,	0,2647,22060,
#Partially deleted in new
chr12	122377795	122422612	chr12:122377795-122422612	0	-	122377795	122380452	789624	4	165,191,112,92,	0,2572,22336,44725,
#Partially deleted in new
chr12	122395541	122399618	chr12:122395541-122399618	0	+	122395541	122395541	8553170	2	124,323,	0,3754,
#Partially deleted in new
chr12	122395605	122400857	chr12:122395605-122400857	3	+	122395605	122395605	8553170	3	60,123,1562,	0,977,3690,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	122471599	122500595	chr12:122471599-122500595	1	-	122473496	122482652	0	12	2676,118,87,122,143,143,61,285,78,106,75,1769,	0,6241,6606,8590,9922,10345,11035,11679,17786,18862,21115,27227,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	122472869	122499325	chr12:122472869-122499325	1	-	122473496	122482652	0	12	1406,118,87,122,143,143,61,66,78,106,75,499,	0,4971,5336,7320,8652,9075,9765,10409,16516,17592,19845,25957,
#Partially deleted in new
chr12	122472892	122478533	chr12:122472892-122478533	0	-	122472892	122472892	8553170	3	1383,118,328,	0,4948,5313,
#Partially deleted in new
chr12	122472898	122501073	chr12:122472898-122501073	3	-	122473496	122500840	0	14	1377,118,87,122,143,143,61,66,104,78,106,75,41,434,	0,4942,5307,7291,8623,9046,9736,10380,10561,16487,17563,19816,25928,27741,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	122473939	122481422	chr12:122473939-122481422	0	-	122473939	122473939	8553170	4	336,118,87,1233,	0,3901,4266,6250,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	122477837	122484162	chr12:122477837-122484162	0	-	122477837	122482652	789624	7	121,87,122,143,143,61,884,	0,368,2352,3684,4107,4797,5441,
#Partially deleted in new
chr12	122477916	122500248	chr12:122477916-122500248	0	-	122477916	122482652	789624	11	42,87,122,143,143,61,78,106,119,75,276,	0,289,2273,3605,4028,4718,11469,12545,13018,14798,22056,
#Deleted in new
chr12	122481521	122482458	chr12:122481521-122482458	0	-	122481521	122481521	8553170	2	143,514,	0,423,
#Partially deleted in new
chr12	122481990	122500520	chr12:122481990-122500520	0	-	122481990	122482652	789624	7	97,61,285,78,106,75,548,	0,644,1288,7395,8471,10724,17982,
#Deleted in new
chr12	122482001	122483690	chr12:122482001-122483690	0	-	122482001	122482001	8553170	2	86,1056,	0,633,
#Deleted in new
chr12	122492112	122492241	chr12:122492112-122492241	3	-	122492112	122492112	8553170	1	129,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	122501186	122501641	chr12:122501186-122501641	3	+	122501186	122501186	8553170	1	455,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	122503457	122526999	chr12:122503457-122526999	3	-	122505526	122526853	789624	10	2249,90,230,80,123,204,191,44,157,152,	0,3376,4760,7651,11647,13769,15381,17927,18685,23390,
#Partially deleted in new
chr12	122505058	122526936	chr12:122505058-122526936	0	-	122520557	122526853	789624	11	648,90,230,80,123,204,213,78,44,157,89,	0,1775,3159,6050,10046,12168,13780,15445,16326,17084,21789,
#Partially deleted in new
chr12	122505058	122527000	chr12:122505058-122527000	0	-	122520557	122526853	789624	11	648,90,233,80,123,204,191,78,44,157,153,	0,1775,3159,6050,10046,12168,13780,15445,16326,17084,21789,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	122505305	122523756	chr12:122505305-122523756	0	-	122505305	122505305	8553170	10	401,90,233,80,123,204,191,133,157,958,	0,1528,2912,5803,9799,11921,13533,15990,16837,17493,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	122505329	122513917	chr12:122505329-122513917	0	-	122505329	122505329	8553170	5	377,90,230,80,151,	0,1504,2888,5779,8437,
#Partially deleted in new
chr12	122505379	122508406	chr12:122505379-122508406	0	-	122505379	122505379	8553170	2	327,189,	0,2838,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	122506371	122508366	chr12:122506371-122508366	0	-	122506371	122506371	8553170	2	882,494,	0,1501,
#Partially deleted in new
chr12	122508249	122526949	chr12:122508249-122526949	0	-	122508249	122508249	8553170	9	198,80,17,123,204,191,44,187,102,	0,2859,6462,6855,8977,10589,13135,13893,18598,
#Partially deleted in new
chr12	122508366	122526960	chr12:122508366-122526960	0	-	122508366	122520511	789624	8	81,80,123,204,213,78,44,113,	0,2742,6738,8860,10472,12137,13018,18481,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	122508377	122519028	chr12:122508377-122519028	0	-	122514715	122519028	789624	7	70,80,108,17,123,204,190,	0,2731,5389,6334,6727,8849,10461,
#Partially deleted in new
chr12	122511110	122526995	chr12:122511110-122526995	0	-	122520557	122526853	789624	8	78,123,200,213,78,44,157,148,	0,3994,6120,7728,9393,10274,11032,15737,
#Partially deleted in new
chr12	122514772	122517396	chr12:122514772-122517396	0	-	122514772	122514772	8553170	2	455,170,	0,2454,
#Partially deleted in new
chr12	122515162	122526987	chr12:122515162-122526987	0	-	122515162	122515162	8553170	5	65,204,2590,157,140,	0,2064,3676,6980,11685,
#Partially deleted in new
chr12	122517235	122526962	chr12:122517235-122526962	0	-	122517235	122518917	789624	4	195,191,44,115,	0,1603,4149,9612,
#Partially deleted in new
chr12	122518839	122526959	chr12:122518839-122526959	0	-	122518839	122518839	8553170	6	212,78,44,157,108,112,	0,1664,2545,3303,3959,8008,
#Partially deleted in new
chr12	122518929	122522442	chr12:122518929-122522442	0	-	122518929	122518929	8553170	4	100,78,44,300,	0,1574,2455,3213,
#Partially deleted in new
chr12	122519442	122522291	chr12:122519442-122522291	0	-	122519442	122519442	8553170	5	222,61,78,44,149,	0,698,1061,1942,2700,
#Partially deleted in new
chr12	122519909	122526954	chr12:122519909-122526954	0	-	122519909	122519909	8553170	4	672,44,157,107,	0,1475,2233,6938,
#Partially deleted in new
chr12	122520545	122526940	chr12:122520545-122526940	0	-	122520545	122521425	789624	6	36,44,157,108,124,93,	0,839,1597,2253,5624,6302,
#Partially deleted in new
chr12	122520977	122526949	chr12:122520977-122526949	0	-	122520977	122520977	8553170	2	451,102,	0,5870,
#Deleted in new
chr12	122527245	122527680	chr12:122527245-122527680	0	+	122527245	122527245	8553170	2	106,225,	0,210,
#Partially deleted in new
chr12	122527247	122626396	chr12:122527247-122626396	3	+	122530063	122626228	789624	64	104,202,121,116,79,78,35,111,94,53,116,55,99,44,66,76,126,90,54,62,112,144,57,102,120,144,99,104,100,135,120,73,68,281,173,98,139,57,164,105,129,117,110,208,90,172,59,217,74,211,110,47,79,119,136,96,57,55,64,130,90,146,91,192,	0,2743,7416,11091,12428,14802,16352,16911,18928,19374,20167,20667,22518,24071,24210,24373,30136,30352,34673,35390,41013,42433,43628,43777,45689,45894,47034,48295,48552,49647,50424,52657,53355,55457,57030,57645,58388,59453,60463,61464,63359,64089,67028,70483,74288,75321,75581,75779,77316,77629,78058,82136,83574,85864,86378,87743,88222,91095,91234,93231,94633,95214,97350,98957,
#Partially deleted in new
chr12	122527247	122626332	chr12:122527247-122626332	1	+	122530063	122626228	789624	39	104,171,121,116,79,78,35,94,53,116,55,99,44,66,76,126,90,54,62,112,144,57,102,120,144,99,47,79,119,136,96,57,55,64,130,90,146,91,128,	0,2774,7416,11091,12428,14802,16352,18928,19374,20167,20667,22518,24071,24210,24373,30136,30352,34673,35390,41013,42433,43628,43777,45689,45894,47034,82136,83574,85864,86378,87743,88222,91095,91234,93231,94633,95214,97350,98957,
#Deleted in new
chr12	122563734	122563762	chr12:122563734-122563762	7	-	122563734	122563734	16724991	1	28,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	122592817	122602644	chr12:122592817-122602644	0	+	122592817	122592817	8553170	3	367,110,76,	0,1458,9751,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	122593415	122601607	chr12:122593415-122601607	0	+	122594353	122601607	789624	3	970,208,72,	0,4315,8120,
#Partially deleted in new
chr12	122593912	122601951	chr12:122593912-122601951	0	+	122593912	122593912	8553170	3	473,208,101,	0,3818,7938,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	122597242	122605087	chr12:122597242-122605087	0	+	122597242	122597242	8553170	7	696,90,172,59,217,74,211,	0,4293,5326,5586,5784,7321,7634,
#Partially deleted in new
chr12	122602822	122604997	chr12:122602822-122604997	0	+	122602822	122602822	8553170	3	421,74,121,	0,1741,2054,
#Partially deleted in new
chr12	122605358	122618537	chr12:122605358-122618537	0	+	122605358	122618537	789624	9	57,47,79,119,58,96,57,55,56,	0,4025,5463,7753,8345,9632,10111,12984,13123,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	122609196	122611765	chr12:122609196-122611765	0	+	122609196	122609196	8553170	2	234,944,	0,1625,
#Partially deleted in new
chr12	122610860	122613669	chr12:122610860-122613669	0	+	122610860	122610860	8553170	3	40,119,44,	0,2251,2765,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	122612881	122618397	chr12:122612881-122618397	0	+	122612881	122612881	8553170	5	349,58,96,57,55,	0,822,2109,2588,5461,
#Partially deleted in new
chr12	122613449	122620535	chr12:122613449-122620535	0	+	122613449	122613449	8553170	6	312,96,57,55,64,57,	0,1541,2020,4893,5032,7029,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	122620041	122626375	chr12:122620041-122626375	1	+	122620566	122626228	789624	5	567,90,146,91,171,	0,1839,2420,4556,6163,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	122634129	122634673	chr12:122634129-122634673	3	+	122634129	122634129	8553170	1	544,	0,
#Partially deleted in new
chr12	122687124	122715979	chr12:122687124-122715979	3	+	122687124	122687124	8553170	3	257,144,1330,	0,14062,27525,
#Partially deleted in new
chr12	122701292	122703343	chr12:122701292-122703343	3	-	122702191	122703283	789624	1	2051,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	122714290	122715708	chr12:122714290-122715708	0	+	122714290	122714290	8553170	2	503,248,	0,1170,
#Deleted in new
chr12	122714755	122716892	chr12:122714755-122716892	3	-	122715573	122716737	789624	1	2137,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	122726075	122730843	chr12:122726075-122730843	3	-	122729298	122730339	789624	1	4768,	0,
#Deleted in new
chr12	122749480	122749586	chr12:122749480-122749586	7	-	122749480	122749480	16724991	1	106,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	122752773	122771064	chr12:122752773-122771064	3	+	122753701	122769078	0	8	177,115,20,85,84,117,140,2031,	0,919,9413,10071,12530,14714,16008,16260,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	122752823	122770070	chr12:122752823-122770070	1	+	122753701	122769637	789624	8	127,115,20,85,84,117,59,445,	0,869,9363,10021,12480,14664,15958,16802,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	122752826	122763256	chr12:122752826-122763256	0	+	122752826	122752826	8553170	4	124,115,20,412,	0,866,9360,10018,
#Partially deleted in new
chr12	122752846	122754287	chr12:122752846-122754287	0	+	122752846	122752846	8553170	2	104,595,	0,846,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	122768098	122768200	chr12:122768098-122768200	3	+	122768098	122768098	8553170	1	102,	0,
#Partially deleted in new
chr12	122774326	122827528	chr12:122774326-122827528	3	+	122774670	122823419	789624	13	380,193,167,102,172,102,89,116,729,145,150,94,1107,	0,3164,6837,11392,14431,17693,22980,23758,26797,31824,38943,49039,52095,
#Partially deleted in new
chr12	122774525	122827211	chr12:122774525-122827211	1	+	122774670	122826469	789624	12	181,193,167,102,172,102,89,116,729,145,150,790,	0,2965,6638,11193,14232,17494,22781,23559,26598,31625,38744,51896,
#Partially deleted in new
chr12	122774527	122827384	chr12:122774527-122827384	0	+	122774670	122826469	789624	13	179,193,167,102,172,102,89,116,729,145,150,196,139,	0,2963,6636,11191,14230,17492,22779,23557,26596,31623,38742,51894,52718,
#Partially deleted in new
chr12	122774531	122788811	chr12:122774531-122788811	0	+	122774670	122788811	789624	3	175,102,54,	0,11187,14226,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	122776557	122827378	chr12:122776557-122827378	1	+	122781239	122823419	789624	9	1126,131,89,116,729,145,150,94,957,	0,4606,20749,21527,24566,29593,36712,46808,49864,
#Partially deleted in new
chr12	122788784	122827211	chr12:122788784-122827211	1	+	122788814	122826469	789624	8	145,102,89,116,729,145,150,790,	0,3235,8522,9300,12339,17366,24485,37637,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr12	122834452	122858017	chr12:122834452-122858017	0	+	122834452	122834452	8553170	18	554,64,143,57,81,77,62,141,58,76,141,62,73,184,89,117,102,997,	0,13578,14013,14343,15422,16382,16783,19590,20452,20600,20812,21098,21378,21527,21803,21979,22172,22568,
#Partially deleted in new
chr12	122835425	122862960	chr12:122835425-122862960	3	+	122835550	122861753	0	32	218,64,143,57,81,77,62,141,58,76,141,62,73,184,89,117,102,195,148,87,108,137,111,59,31,63,101,106,124,62,207,1255,	0,12605,13040,13370,14449,15409,15810,18617,19479,19627,19839,20125,20405,20554,20830,21006,21199,21595,22676,22923,23412,23635,24000,24346,24621,24722,24997,25253,25490,25705,25882,26280,
#Partially deleted in new
chr12	122835480	122857384	chr12:122835480-122857384	0	+	122835480	122835480	8553170	18	163,64,143,57,81,77,62,141,58,76,141,62,73,184,89,117,102,364,	0,12550,12985,13315,14394,15354,15755,18562,19424,19572,19784,20070,20350,20499,20775,20951,21144,21540,
#Partially deleted in new
chr12	122850805	122855359	chr12:122850805-122855359	0	+	122850805	122850805	8553170	6	106,62,141,58,76,95,	0,430,3237,4099,4247,4459,
#Partially deleted in new
chr12	122853482	122856101	chr12:122853482-122856101	0	+	122853482	122853482	8553170	7	701,58,76,141,62,73,122,	0,1422,1570,1782,2068,2348,2497,
#Deleted in new
chr12	122858824	122860329	chr12:122858824-122860329	0	+	122858824	122858824	8553170	5	121,137,111,59,283,	0,236,601,947,1222,
#Deleted in new
chr12	122859421	122862383	chr12:122859421-122862383	0	+	122859421	122859421	8553170	9	115,59,164,101,106,124,62,207,678,	0,350,625,1001,1257,1494,1709,1886,2284,
#Deleted in new
chr12	122860037	122861647	chr12:122860037-122861647	0	+	122860037	122860037	8553170	4	173,362,124,517,	0,385,878,1093,
#Deleted in new
chr12	122860164	122862084	chr12:122860164-122862084	0	+	122860164	122861753	789624	6	46,106,124,62,207,379,	0,514,751,966,1143,1541,
#Deleted in new
chr12	122861715	122862486	chr12:122861715-122862486	0	+	122861715	122861715	8553170	2	282,383,	0,388,
#Partially deleted in new
chr12	122865327	122896444	chr12:122865327-122896444	3	-	122867115	122896062	789624	4	2280,83,172,493,	0,3152,5562,30624,
#Deleted in new
chr12	122865334	122867021	chr12:122865334-122867021	3	+	122865334	122865334	8553170	2	163,321,	0,1366,
#Partially deleted in new
chr12	122867153	122896127	chr12:122867153-122896127	0	-	122867153	122896062	789624	4	454,83,166,176,	0,1326,3736,28798,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	122867414	122890159	chr12:122867414-122890159	0	-	122867414	122888624	789624	4	193,83,172,1640,	0,1065,3475,21105,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	122870058	122888720	chr12:122870058-122888720	3	-	122870058	122870058	8553170	1	18662,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	122870074	122871681	chr12:122870074-122871681	0	-	122870074	122870074	8553170	2	987,470,	0,1137,
#Partially deleted in new
chr12	122920950	122966460	chr12:122920950-122966460	1	-	122921037	122960235	789624	12	93,137,160,174,189,129,198,206,131,115,688,174,	0,11241,14321,19160,19856,23440,25074,27673,28837,29500,38684,45336,
#Partially deleted in new
chr12	122924524	122966460	chr12:122924524-122966460	1	-	122924798	122960235	789624	12	286,137,160,174,189,129,198,206,131,115,688,174,	0,7667,10747,15586,16282,19866,21500,24099,25263,25926,35110,41762,
#Partially deleted in new
chr12	122928991	122966496	chr12:122928991-122966496	1	-	122929910	122960235	789624	12	1180,137,160,174,189,129,198,206,131,115,688,210,	0,3200,6280,11119,11815,15399,17033,19632,20796,21459,30643,37295,
#Partially deleted in new
chr12	122928993	122966509	chr12:122928993-122966509	1	-	122929910	122960235	789624	11	1178,137,160,174,189,198,206,131,115,688,223,	0,3198,6278,11117,11813,17031,19630,20794,21457,30641,37293,
#Partially deleted in new
chr12	122928993	122966500	chr12:122928993-122966500	1	-	122929910	122960235	789624	11	1178,137,160,174,129,198,206,131,115,688,214,	0,3198,6278,11117,15397,17031,19630,20794,21457,30641,37293,
#Partially deleted in new
chr12	122928998	122975205	chr12:122928998-122975205	1	-	122929910	122960235	789624	12	1173,137,160,174,189,129,198,206,131,115,688,491,	0,3193,6273,11112,11808,15392,17026,19625,20789,21452,30636,45716,
#Partially deleted in new
chr12	122928999	122975205	chr12:122928999-122975205	1	-	122929910	122960235	789624	12	1181,137,160,174,189,129,198,206,131,115,688,491,	0,3192,6272,11111,11807,15391,17025,19624,20788,21451,30635,45715,
#Partially deleted in new
chr12	122928999	122981649	chr12:122928999-122981649	3	-	122929910	122960235	789624	12	1172,137,160,174,189,129,198,206,131,115,688,2752,	0,3192,6272,11111,11807,15391,17025,19624,20788,21451,30635,49898,
#Partially deleted in new
chr12	122930010	122944675	chr12:122930010-122944675	0	-	122930010	122944591	789624	5	161,137,160,174,285,	0,2181,5261,10100,14380,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	122931325	122959787	chr12:122931325-122959787	0	-	122948655	122959787	789624	9	1003,160,174,129,198,85,117,115,153,	0,3946,8785,13065,14699,17298,18462,19125,28309,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	122931640	122966402	chr12:122931640-122966402	0	-	122949801	122960235	789624	10	688,160,174,129,198,206,117,115,688,116,	0,3631,8470,12750,14384,16983,18147,18810,27994,34646,
#Partially deleted in new
chr12	122935272	122946477	chr12:122935272-122946477	0	-	122935272	122946153	789624	5	159,174,189,129,453,	0,4838,5534,9118,10752,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	122939448	122960260	chr12:122939448-122960260	0	-	122939448	122939448	8553170	8	836,189,129,198,206,131,115,626,	0,1358,4942,6576,9175,10339,11002,20186,
#Partially deleted in new
chr12	122940125	122944702	chr12:122940125-122944702	0	-	122940125	122940125	8553170	4	159,189,129,69,	0,681,4265,4508,
#Partially deleted in new
chr12	122940206	122944672	chr12:122940206-122944672	0	-	122940206	122944591	789624	3	78,189,282,	0,600,4184,
#Partially deleted in new
chr12	122940945	122949312	chr12:122940945-122949312	0	-	122940945	122948794	789624	4	50,129,198,689,	0,3445,5079,7678,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	122944390	122951005	chr12:122944390-122951005	0	-	122944390	122950503	789624	5	129,198,206,80,555,	0,1634,4233,5397,6060,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	122944394	122948571	chr12:122944394-122948571	0	-	122944394	122947499	789624	3	125,198,1096,	0,1630,3081,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	122946175	122953084	chr12:122946175-122953084	0	-	122946175	122950503	789624	5	47,206,131,115,1609,	0,2448,3612,4275,5300,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	122960038	122974682	chr12:122960038-122974682	0	-	122960038	122960235	789624	3	284,116,168,	0,13004,14476,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	122972865	122973233	chr12:122972865-122973233	0	-	122972865	122972865	8553170	1	368,	0,
#Partially deleted in new
chr12	122974579	122980042	chr12:122974579-122980042	1	+	122976392	122979346	789624	8	542,57,149,114,100,128,258,960,	0,1231,1673,2074,2291,3862,4173,4503,
#Partially deleted in new
chr12	122974679	122978988	chr12:122974679-122978988	0	+	122974679	122974679	8553170	5	49,114,100,128,236,	0,1974,2191,3762,4073,
#Partially deleted in new
chr12	122974702	122979762	chr12:122974702-122979762	1	+	122978530	122979346	789624	8	419,57,114,100,111,210,258,680,	0,1108,1951,2168,3278,3657,4050,4380,
#Partially deleted in new
chr12	122974726	122980043	chr12:122974726-122980043	1	+	122978530	122979346	789624	6	395,114,100,128,258,961,	0,1927,2144,3715,4026,4356,
#Partially deleted in new
chr12	122974741	122979533	chr12:122974741-122979533	0	+	122974741	122974741	8553170	6	380,957,100,128,258,451,	0,1069,2129,3700,4011,4341,
#Partially deleted in new
chr12	122974747	122979265	chr12:122974747-122979265	0	+	122978530	122979265	789624	8	374,57,167,100,219,210,258,183,	0,1063,1853,2123,3233,3612,4005,4335,
#Partially deleted in new
chr12	122974751	122979438	chr12:122974751-122979438	1	+	122978530	122979346	789624	7	370,57,114,296,245,258,356,	0,1059,1902,2119,3573,4001,4331,
#Partially deleted in new
chr12	122974751	122979438	chr12:122974751-122979438	1	+	122978530	122979346	789624	7	370,57,114,100,210,258,356,	0,1059,1902,2119,3608,4001,4331,
#Partially deleted in new
chr12	122974777	122979005	chr12:122974777-122979005	0	+	122974777	122974777	8553170	6	344,57,114,100,128,253,	0,1033,1876,2093,3664,3975,
#Partially deleted in new
chr12	122974816	122979438	chr12:122974816-122979438	1	+	122978530	122979346	789624	7	305,57,167,93,245,258,356,	0,994,1784,2054,3508,3936,4266,
#Partially deleted in new
chr12	122974837	122978569	chr12:122974837-122978569	0	+	122974837	122974837	8553170	4	284,114,93,245,	0,1816,2033,3487,
#Partially deleted in new
chr12	122974860	122978547	chr12:122974860-122978547	0	+	122974860	122974860	8553170	6	261,57,114,100,77,188,	0,950,1793,2010,3120,3499,
#Partially deleted in new
chr12	122974866	122978868	chr12:122974866-122978868	0	+	122974866	122974866	8553170	3	255,128,116,	0,3575,3886,
#Partially deleted in new
chr12	122974970	122979762	chr12:122974970-122979762	1	+	122978530	122979346	789624	7	151,57,114,100,128,258,680,	0,840,1683,1900,3471,3782,4112,
#Partially deleted in new
chr12	122975219	122980041	chr12:122975219-122980041	3	+	122975251	122979346	789624	7	164,57,114,100,128,258,959,	0,591,1434,1651,3222,3533,3863,
#Deleted in new
chr12	122975238	122976970	chr12:122975238-122976970	0	+	122975251	122976970	789624	5	145,57,149,184,100,	0,572,1014,1345,1632,
#Partially deleted in new
chr12	122975238	122979439	chr12:122975238-122979439	0	+	122975238	122975238	8553170	6	145,57,114,93,245,687,	0,572,1415,1632,3086,3514,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	122975241	122977653	chr12:122975241-122977653	0	+	122975241	122975241	8553170	3	142,114,783,	0,1412,1629,
#Partially deleted in new
chr12	122975244	122979010	chr12:122975244-122979010	0	+	122975244	122975244	8553170	5	139,57,100,128,258,	0,566,1626,3197,3508,
#Partially deleted in new
chr12	122975251	122980040	chr12:122975251-122980040	0	+	122975251	122976904	789624	8	132,57,167,93,35,128,258,958,	0,559,1349,1619,3073,3190,3501,3831,
#Partially deleted in new
chr12	122975251	122978056	chr12:122975251-122978056	0	+	122975251	122975251	8553170	5	132,57,114,100,76,	0,559,1402,1619,2729,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	122975319	122982907	chr12:122975319-122982907	3	+	122975319	122975319	8553170	7	64,57,114,1699,3127,118,439,	0,491,1334,1551,3433,6637,7149,
#Partially deleted in new
chr12	122975463	122978849	chr12:122975463-122978849	0	+	122975463	122975463	8553170	6	80,57,114,100,128,97,	0,347,1190,1407,2978,3289,
#Partially deleted in new
chr12	122976127	122978981	chr12:122976127-122978981	0	+	122976127	122976127	8553170	5	640,100,111,128,229,	0,743,1853,2314,2625,
#Partially deleted in new
chr12	122976884	122978830	chr12:122976884-122978830	0	+	122976884	122976884	8553170	3	86,210,78,	0,1475,1868,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	122977424	122979265	chr12:122977424-122979265	0	+	122978530	122979265	789624	4	775,210,258,183,	0,935,1328,1658,
#Deleted in new
chr12	122980059	122982909	chr12:122980059-122982909	3	+	122980204	122982676	789624	6	686,171,309,118,70,290,	0,1069,1511,1897,2409,2560,
#Deleted in new
chr12	122980059	122982913	chr12:122980059-122982913	1	+	122980204	122982676	789624	6	686,138,285,118,70,294,	0,1069,1535,1897,2409,2560,
#Deleted in new
chr12	122980178	122982908	chr12:122980178-122982908	0	+	122980387	122981774	789624	6	567,171,154,44,70,289,	0,950,1477,1852,2290,2441,
#Deleted in new
chr12	122980188	122982909	chr12:122980188-122982909	1	+	122980204	122982676	789624	6	557,171,285,118,70,290,	0,940,1406,1768,2280,2431,
#Deleted in new
chr12	122980190	122982711	chr12:122980190-122982711	1	+	122980204	122982586	789624	5	555,138,285,118,243,	0,938,1404,1766,2278,
#Deleted in new
chr12	122980190	122982073	chr12:122980190-122982073	0	+	122980387	122982073	789624	4	555,138,309,117,	0,938,1380,1766,
#Deleted in new
chr12	122980230	122982538	chr12:122980230-122982538	0	+	122981139	122982538	789624	5	155,171,285,118,70,	0,898,1364,1726,2238,
#Deleted in new
chr12	122980262	122982795	chr12:122980262-122982795	1	+	122981139	122982676	789624	6	123,138,285,118,70,176,	0,866,1332,1694,2206,2357,
#Deleted in new
chr12	122980494	122982909	chr12:122980494-122982909	1	+	122981139	122982676	789624	6	393,138,309,118,70,290,	0,634,1076,1462,1974,2125,
#Deleted in new
chr12	122980681	122982906	chr12:122980681-122982906	0	+	122980681	122980681	8553170	4	64,751,582,287,	0,447,1275,1938,
#Deleted in new
chr12	122980695	122982765	chr12:122980695-122982765	0	+	122980695	122980695	8553170	5	50,171,154,44,297,	0,433,960,1335,1773,
#Deleted in new
chr12	122980702	122982860	chr12:122980702-122982860	1	+	122981139	122982676	789624	6	110,138,215,44,70,241,	0,426,892,1328,1766,1917,
#Deleted in new
chr12	122980715	122982890	chr12:122980715-122982890	0	+	122980715	122980715	8553170	3	97,751,934,	0,413,1241,
#Deleted in new
chr12	122980720	122982873	chr12:122980720-122982873	0	+	122980720	122980720	8553170	5	546,285,118,70,254,	0,874,1236,1748,1899,
#Deleted in new
chr12	122980732	122982883	chr12:122980732-122982883	0	+	122980732	122980732	8553170	4	80,751,582,264,	0,396,1224,1887,
#Deleted in new
chr12	122980747	122982706	chr12:122980747-122982706	1	+	122981139	122982676	789624	6	65,171,285,118,70,87,	0,381,847,1209,1721,1872,
#Deleted in new
chr12	122980927	122982909	chr12:122980927-122982909	0	+	122980927	122980927	8553170	4	60,751,118,441,	0,201,1029,1541,
#Deleted in new
chr12	122981136	122982731	chr12:122981136-122982731	0	+	122981136	122982586	789624	4	130,285,118,263,	0,458,820,1332,
#Deleted in new
chr12	122981139	122982676	chr12:122981139-122982676	1	+	122981139	122982676	789624	5	160,215,44,70,57,	0,455,891,1329,1480,
#Deleted in new
chr12	122981952	122982908	chr12:122981952-122982908	0	+	122981952	122981952	8553170	2	122,440,	0,516,
#Partially deleted in new
chr12	122983479	123110495	chr12:122983479-123110495	1	-	122986026	123034590	789624	25	2871,129,184,150,149,117,117,149,165,144,171,179,272,120,190,248,71,105,96,309,228,122,215,173,111,	0,2956,3166,3801,4031,4305,4754,5244,7065,8275,9019,11321,11909,12978,13241,13845,17298,17574,20914,21760,26370,29133,30348,51033,126905,
#Partially deleted in new
chr12	122983479	123110428	chr12:122983479-123110428	3	-	122986026	123034590	789624	25	2871,129,184,150,149,117,117,149,162,165,171,179,272,120,190,248,71,105,96,309,228,122,215,173,44,	0,2956,3166,3801,4031,4305,4754,5244,6307,7065,9019,11321,11909,12978,13241,13845,17298,17574,20914,21760,26370,29133,30348,51033,126905,
#Partially deleted in new
chr12	122983480	123034654	chr12:122983480-123034654	1	-	122986026	123034590	789624	24	2870,129,184,150,149,117,117,149,162,165,171,179,272,120,190,248,71,105,96,309,228,122,215,142,	0,2955,3165,3800,4030,4304,4753,5243,6306,7064,9018,11320,11908,12977,13240,13844,17297,17573,20913,21759,26369,29132,30347,51032,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	122997437	123006120	chr12:122997437-123006120	0	-	122997437	122997437	8553170	5	135,71,105,96,881,	0,3340,3616,6956,7802,
#Partially deleted in new
chr12	123000302	123081333	chr12:123000302-123081333	1	-	123000379	123034590	789624	10	176,71,105,210,309,228,122,215,173,184,	0,475,751,4091,4937,9547,12310,13525,34210,80847,
#Partially deleted in new
chr12	123000303	123105499	chr12:123000303-123105499	0	-	123000303	123000303	8553170	10	175,71,105,96,309,228,122,215,173,145,	0,474,750,4090,4936,9546,12309,13524,34209,105051,
#Deleted in new
chr12	123010666	123010728	chr12:123010666-123010728	3	-	123010666	123010666	5263520	1	62,	0,
#Partially deleted in new
chr12	123013995	123150015	chr12:123013995-123150015	0	-	123013995	123034590	789624	4	47,173,104,240,	0,20517,96389,135780,
#Partially deleted in new
chr12	123034251	123110489	chr12:123034251-123110489	0	-	123034251	123034251	8553170	2	434,105,	0,76133,
#Partially deleted in new
chr12	123034544	123076095	chr12:123034544-123076095	0	-	123034544	123034590	789624	2	141,522,	0,41029,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	123081383	123084744	chr12:123081383-123084744	3	+	123081383	123081383	789624	3	609,72,1510,	0,1504,1851,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	123082789	123084129	chr12:123082789-123084129	0	+	123082789	123082789	8553170	2	170,895,	0,445,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	123087255	123092821	chr12:123087255-123092821	3	-	123087255	123087255	8553170	1	5566,	0,
#Partially deleted in new
chr12	123152319	123155816	chr12:123152319-123155816	0	-	123152319	123152319	8553170	3	306,49,129,	0,2062,3368,
#Partially deleted in new
chr12	123152323	123163961	chr12:123152323-123163961	0	-	123152532	123163961	789624	6	302,69,248,104,121,12,	0,8457,8812,9791,10690,11626,
#Deleted in new
chr12	123152323	123153377	chr12:123152323-123153377	3	-	123152323	123152323	8553170	1	1054,	0,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr12	123154214	123230446	chr12:123154214-123230446	1	-	123156806	123230364	789624	22	2694,69,248,104,121,141,176,135,102,65,48,216,88,156,461,126,107,91,124,524,154,186,	0,6566,6921,7900,8799,9735,11087,12440,22473,25711,26948,40171,44032,47949,48409,49035,55841,60529,64161,67157,73248,76046,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr12	123154214	123233123	chr12:123154214-123233123	3	-	123156806	123230364	789624	24	2694,69,248,104,121,141,176,135,102,65,48,216,88,156,461,126,107,91,124,524,90,154,262,49,	0,6566,6921,7900,8799,9735,11087,12440,22473,25711,26948,40171,44032,47949,48409,49035,55841,60529,64161,67157,68823,73248,76046,78860,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	123156398	123163026	chr12:123156398-123163026	0	-	123156398	123156398	8553170	4	510,69,248,912,	0,4382,4737,5716,
#Partially deleted in new
chr12	123156635	123221847	chr12:123156635-123221847	0	-	123161367	123221847	789624	18	273,69,248,121,141,176,135,102,65,48,216,88,156,461,107,91,124,476,	0,4145,4500,6378,7314,8666,10019,20052,23290,24527,37750,41611,45528,45988,53420,58108,61740,64736,
#Partially deleted in new
chr12	123156635	123233111	chr12:123156635-123233111	0	-	123226339	123230364	789624	24	273,69,248,104,121,141,176,135,102,65,48,216,88,156,262,107,91,101,524,90,64,154,262,37,	0,4145,4500,5479,6378,7314,8666,10019,20052,23290,24527,37750,41611,45528,46478,53420,58108,61763,64736,66402,69652,70827,73625,76439,
#Partially deleted in new
chr12	123156773	123163036	chr12:123156773-123163036	0	-	123162122	123163036	789624	5	135,69,248,78,23,	0,4007,4362,5341,6240,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	123159693	123218478	chr12:123159693-123218478	0	-	123161367	123218478	789624	16	1156,248,121,141,176,135,102,65,48,216,88,156,461,107,91,103,	0,1442,3320,4256,5608,6961,16994,20232,21469,34692,38553,42470,42930,50362,55050,58682,
#Partially deleted in new
chr12	123161267	123163400	chr12:123161267-123163400	0	-	123161267	123161267	8553170	3	116,104,387,	0,847,1746,
#Partially deleted in new
chr12	123162772	123165462	chr12:123162772-123165462	0	-	123162772	123162772	8553170	3	362,141,161,	0,1177,2529,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	123163083	123165606	chr12:123163083-123165606	0	-	123163083	123163083	8553170	3	51,141,305,	0,866,2218,
#Partially deleted in new
chr12	123163768	123176716	chr12:123163768-123176716	0	-	123163938	123176716	789624	4	322,176,135,29,	0,1533,2886,12919,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	123166360	123179980	chr12:123166360-123179980	0	-	123166360	123166360	8553170	3	429,102,55,	0,10327,13565,
#Partially deleted in new
chr12	123194508	123202838	chr12:123194508-123202838	0	-	123202302	123202838	789624	4	93,88,156,148,	0,3738,7655,8182,
#Partially deleted in new
chr12	123202884	123223127	chr12:123202884-123223127	0	-	123202884	123223127	789624	7	200,126,107,91,124,352,90,	0,365,7171,11859,15491,18487,20153,
#Partially deleted in new
chr12	123218457	123233170	chr12:123218457-123233170	0	-	123218457	123230364	789624	3	42,262,96,	0,11803,14617,
#Partially deleted in new
chr12	123221664	123233238	chr12:123221664-123233238	0	-	123221664	123221664	8553170	4	231,90,262,164,	0,1373,8596,11410,
#Partially deleted in new
chr12	123221692	123233107	chr12:123221692-123233107	0	-	123221692	123230364	789624	5	31,90,154,262,33,	0,1345,5770,8568,11382,
#Partially deleted in new
chr12	123221807	123233136	chr12:123221807-123233136	0	-	123221807	123221807	8553170	5	88,90,71,262,62,	0,1230,5738,8453,11267,
#Partially deleted in new
chr12	123221842	123233126	chr12:123221842-123233126	0	-	123227535	123230364	789624	5	53,90,110,262,52,	0,1195,5620,8418,11232,
#Partially deleted in new
chr12	123227467	123244014	chr12:123227467-123244014	0	-	123227467	123230364	789624	3	149,262,162,	0,2793,16385,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	123230036	123233101	chr12:123230036-123233101	0	-	123230036	123230036	8553170	2	486,27,	0,3038,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	123232915	123257959	chr12:123232915-123257959	3	+	123253674	123257031	789624	3	616,310,1147,	0,20731,23897,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	123233436	123256962	chr12:123233436-123256962	0	+	123233436	123233436	8553170	3	95,1387,150,	0,20210,23376,
#Partially deleted in new
chr12	123233436	123256891	chr12:123233436-123256891	0	+	123233436	123233436	8553170	3	95,553,79,	0,20210,23376,
#Partially deleted in new
chr12	123233457	123253783	chr12:123233457-123253783	0	+	123253674	123253783	789624	2	467,137,	0,20189,
#Partially deleted in new
chr12	123233461	123253964	chr12:123233461-123253964	0	+	123253674	123253964	789624	3	70,185,318,	0,278,20185,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	123233480	123257959	chr12:123233480-123257959	1	+	123253674	123257031	789624	3	444,310,1147,	0,20166,23332,
#Partially deleted in new
chr12	123240528	123243952	chr12:123240528-123243952	0	-	123240528	123240528	8553170	2	163,131,	0,3293,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	123252029	123260447	chr12:123252029-123260447	0	-	123252029	123252029	8553170	3	513,106,174,	0,7013,8244,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	123253389	123257571	chr12:123253389-123257571	1	+	123253674	123257031	789624	2	567,759,	0,3423,
#Partially deleted in new
chr12	123260970	123268254	chr12:123260970-123268254	1	-	123261735	123267253	0	4	833,127,98,86,	0,4225,6214,7198,
#Partially deleted in new
chr12	123260980	123272140	chr12:123260980-123272140	3	-	123261735	123271618	0	4	823,127,98,577,	0,4215,6204,10583,
#Partially deleted in new
chr12	123261002	123271141	chr12:123261002-123271141	1	-	123261735	123267253	0	4	801,127,98,255,	0,4193,6182,9884,
#Partially deleted in new
chr12	123261002	123269239	chr12:123261002-123269239	1	-	123261735	123267253	0	4	801,127,98,135,	0,4193,6182,8102,
#Partially deleted in new
chr12	123261011	123268077	chr12:123261011-123268077	1	-	123261735	123267253	0	3	792,127,893,	0,4184,6173,
#Partially deleted in new
chr12	123261275	123272334	chr12:123261275-123272334	1	-	123261735	123267253	0	4	528,127,98,178,	0,3920,5909,10881,
#Partially deleted in new
chr12	123262059	123262402	chr12:123262059-123262402	3	+	123262059	123262059	8553170	1	343,	0,
#Partially deleted in new
chr12	123265192	123268284	chr12:123265192-123268284	0	-	123265192	123267253	789624	3	130,98,116,	0,1992,2976,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	123282915	123283034	chr12:123282915-123283034	7	-	123282915	123282915	16724991	1	119,	0,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr12	123289108	123364843	chr12:123289108-123364843	3	-	123295907	123350441	789624	32	6942,194,77,138,93,95,147,75,100,72,113,136,132,176,168,198,152,98,183,154,106,136,162,91,134,161,97,101,310,105,132,143,	0,8869,13715,15473,20201,20380,20601,21946,24511,26264,26439,28112,30791,31323,31590,32426,34571,36393,37043,38317,38598,38783,39625,41310,42133,44944,47286,51879,56149,58920,61201,75592,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr12	123289108	123350441	chr12:123289108-123350441	1	-	123295907	123350441	789624	31	6942,194,77,138,93,95,147,75,100,72,113,136,132,176,168,198,152,98,183,154,106,136,162,91,134,161,97,101,313,105,132,	0,8869,13715,15473,20201,20380,20601,21946,24511,26264,26439,28112,30791,31323,31590,32426,34571,36393,37043,38317,38598,38783,39625,41310,42133,44944,47286,51879,56149,58920,61201,
#Partially deleted in new
chr12	123295904	123364828	chr12:123295904-123364828	1	-	123295907	123350441	789624	32	146,194,77,138,93,95,147,75,100,72,113,136,132,176,168,198,152,98,183,154,106,136,162,91,134,161,97,101,313,105,132,128,	0,2073,6919,8677,13405,13584,13805,15150,17715,19468,19643,21316,23995,24527,24794,25630,27775,29597,30247,31521,31802,31987,32829,34514,35337,38148,40490,45083,49353,52124,54405,68796,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	123348998	123349100	chr12:123348998-123349100	3	-	123348998	123348998	8553170	1	102,	0,
#Deleted in new
chr12	123363867	123365787	chr12:123363867-123365787	3	+	123363867	123363867	8553170	1	1920,	0,
#Deleted in new
chr12	123364763	123364843	chr12:123364763-123364843	3	-	123364763	123364763	789624	1	80,	0,
#Deleted in new
chr12	123364952	123366113	chr12:123364952-123366113	1	+	123364952	123364952	8553170	2	163,589,	0,572,
#Partially deleted in new
chr12	123383772	123409351	chr12:123383772-123409351	1	+	123389512	123407703	789624	9	436,122,157,220,88,60,191,1314,481,	0,5660,6857,11274,12572,19800,21111,23720,25098,
#Partially deleted in new
chr12	123383772	123409358	chr12:123383772-123409358	3	+	123384198	123407703	789624	8	436,122,157,220,88,60,191,1866,	0,5660,6857,11274,12572,19800,21111,23720,
#Partially deleted in new
chr12	123384165	123408507	chr12:123384165-123408507	0	+	123384198	123395155	789624	7	43,157,220,88,60,191,1015,	0,6464,10881,12179,19407,20718,23327,
#Partially deleted in new
chr12	123384172	123388757	chr12:123384172-123388757	0	+	123384172	123384172	8553170	2	36,316,	0,4269,
#Partially deleted in new
chr12	123388899	123396409	chr12:123388899-123396409	0	+	123388899	123388899	8553170	4	283,157,220,65,	0,1730,6147,7445,
#Partially deleted in new
chr12	123389270	123405074	chr12:123389270-123405074	0	+	123389270	123389270	8553170	6	284,157,220,88,60,191,	0,1359,5776,7074,14302,15613,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	123389482	123391304	chr12:123389482-123391304	0	+	123389482	123389482	8553170	2	72,675,	0,1147,
#Partially deleted in new
chr12	123390041	123407568	chr12:123390041-123407568	0	+	123390045	123407568	789624	7	109,157,220,88,60,191,76,	0,588,5005,6303,13531,14842,17451,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	123410682	123436717	chr12:123410682-123436717	3	-	123415890	123436420	789624	4	5239,114,152,636,	0,12361,19825,25399,
#Partially deleted in new
chr12	123441516	123441852	chr12:123441516-123441852	7	-	123441516	123441516	16724991	1	336,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	123457640	123466936	chr12:123457640-123466936	3	+	123465540	123466281	789624	2	576,1399,	0,7897,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	123458118	123473154	chr12:123458118-123473154	0	+	123458118	123458118	789624	2	98,2063,	0,12973,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	123458126	123464899	chr12:123458126-123464899	0	+	123458126	123458126	8553170	2	90,471,	0,6302,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	123459522	123466299	chr12:123459522-123466299	1	+	123459888	123466281	789624	2	378,762,	0,6015,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	123464505	123466390	chr12:123464505-123466390	1	+	123465540	123466281	789624	2	89,853,	0,1032,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	123470053	123533718	chr12:123470053-123533718	3	-	123472537	123533482	789624	7	2629,93,173,222,119,151,545,	0,14126,15579,28490,29364,53441,63120,
#Partially deleted in new
chr12	123471815	123533718	chr12:123471815-123533718	1	-	123472676	123533482	789624	8	867,88,93,173,222,119,151,545,	0,3847,12364,13817,26728,27602,51679,61358,
#Partially deleted in new
chr12	123472067	123514428	chr12:123472067-123514428	0	-	123472067	123472067	8553170	7	615,93,96,173,222,119,1071,	0,12112,13060,13565,26476,27350,41290,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	123472166	123484974	chr12:123472166-123484974	0	-	123472166	123472166	8553170	3	516,93,160,	0,12013,12648,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	123472199	123476093	chr12:123472199-123476093	0	-	123472199	123472199	8553170	1	3894,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	123515274	123515513	chr12:123515274-123515513	3	-	123515274	123515274	8553170	1	239,	0,
#Deleted in new
chr12	123519389	123519856	chr12:123519389-123519856	3	-	123519389	123519389	8553170	1	467,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	123536408	123536534	chr12:123536408-123536534	3	+	123536408	123536408	5263520	1	126,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	123575890	123585115	chr12:123575890-123585115	3	-	123575890	123575890	8553170	3	7277,98,904,	0,7710,8321,
#Partially deleted in new
chr12	123584530	123598577	chr12:123584530-123598577	3	+	123584636	123596729	0	4	286,193,108,1973,	0,2216,5811,12074,
#Partially deleted in new
chr12	123584532	123590446	chr12:123584532-123590446	0	+	123584636	123590446	789624	4	284,193,21,105,	0,2214,3078,5809,
#Partially deleted in new
chr12	123584548	123597342	chr12:123584548-123597342	0	+	123584548	123584548	8553170	4	268,193,151,738,	0,2198,5793,12056,
#Partially deleted in new
chr12	123584597	123586960	chr12:123584597-123586960	0	+	123584597	123584597	8553170	2	219,214,	0,2149,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	123585561	123597093	chr12:123585561-123597093	1	+	123586821	123596729	789624	3	1378,108,489,	0,4780,11043,
#Partially deleted in new
chr12	123602076	123619716	chr12:123602076-123619716	0	+	123602076	123602076	8553170	11	180,51,87,1398,190,83,132,93,115,169,269,	0,3854,3996,5355,7862,11093,13108,14434,15681,16592,17371,
#Partially deleted in new
chr12	123602096	123607770	chr12:123602096-123607770	0	+	123602096	123602096	8553170	5	160,64,87,92,171,	0,3834,3976,5335,5503,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr12	123602098	123620941	chr12:123602098-123620941	3	+	123602148	123620140	789624	14	158,51,87,92,63,150,190,83,132,93,115,169,293,978,	0,3832,3974,5333,5501,6581,7840,11071,13086,14412,15659,16570,17333,17865,
#Partially deleted in new
chr12	123602098	123607662	chr12:123602098-123607662	0	+	123602098	123602098	8553170	3	158,229,63,	0,3832,5501,
#Partially deleted in new
chr12	123602124	123617870	chr12:123602124-123617870	0	+	123602148	123607644	789624	8	132,63,150,190,83,132,93,113,	0,5475,6555,7814,11045,13060,14386,15633,
#Partially deleted in new
chr12	123602127	123620144	chr12:123602127-123620144	1	+	123602148	123620140	789624	13	129,51,87,92,63,150,190,83,132,115,169,293,181,	0,3803,3945,5304,5472,6552,7811,11042,13057,15630,16541,17304,17836,
#Partially deleted in new
chr12	123602127	123610103	chr12:123602127-123610103	0	+	123602148	123605885	789624	7	129,117,87,92,59,150,165,	0,3737,3945,5304,5476,6552,7811,
#Partially deleted in new
chr12	123602129	123616603	chr12:123602129-123616603	0	+	123602148	123610027	789624	10	127,51,87,92,63,150,126,83,132,93,	0,3801,3943,5302,5470,6550,7873,11040,13055,14381,
#Partially deleted in new
chr12	123602142	123610070	chr12:123602142-123610070	0	+	123602142	123602142	8553170	6	114,51,87,231,150,132,	0,3788,3930,5289,6537,7796,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	123604872	123618153	chr12:123604872-123618153	0	+	123604872	123604872	8553170	8	1109,87,150,190,83,132,93,396,	0,1200,3807,5066,8297,10312,11638,12885,
#Partially deleted in new
chr12	123613214	123619628	chr12:123613214-123619628	0	+	123613214	123613214	8553170	4	38,132,93,197,	0,1970,3296,6217,
#Partially deleted in new
chr12	123616557	123618778	chr12:123616557-123618778	0	+	123616557	123616557	8553170	3	46,115,168,	0,1200,2053,
#Deleted in new
chr12	123616707	123616840	chr12:123616707-123616840	3	+	123616707	123616707	5263520	1	133,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	123618015	123620422	chr12:123618015-123620422	1	+	123618683	123620140	789624	3	822,293,459,	0,1416,1948,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	123620405	123633766	chr12:123620405-123633766	3	-	123621755	123633557	0	9	1515,126,76,69,113,117,137,102,222,	0,2230,4381,6019,6638,9763,9991,11939,13139,
#Partially deleted in new
chr12	123621737	123632447	chr12:123621737-123632447	1	-	123622664	123632420	789624	7	183,126,69,113,117,137,103,	0,898,4687,5306,8431,8659,10607,
#Partially deleted in new
chr12	123622635	123633604	chr12:123622635-123633604	0	-	123624820	123633604	789624	6	126,76,117,137,102,60,	0,2151,7533,7761,9709,10909,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	123625966	123633766	chr12:123625966-123633766	1	-	123626856	123633557	0	5	1190,117,137,102,222,	0,4202,4430,6378,7578,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	123630046	123633688	chr12:123630046-123633688	0	-	123630046	123630046	8553170	4	239,137,102,144,	0,350,2298,3498,
#Partially deleted in new
chr12	123630233	123633657	chr12:123630233-123633657	0	-	123630233	123630233	8553170	4	71,137,102,113,	0,163,2111,3311,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	123633738	123662603	chr12:123633738-123662603	1	+	123652542	123660235	789624	12	134,80,107,63,30,29,75,54,69,136,37,2438,	0,5525,11716,17255,18793,18968,21185,22032,25777,26056,26307,26427,
#Partially deleted in new
chr12	123633827	123659584	chr12:123633827-123659584	0	+	123633859	123650997	789624	9	45,80,107,63,30,29,75,54,69,	0,5436,11627,17166,18704,18879,21096,21943,25688,
#Partially deleted in new
chr12	123633828	123660829	chr12:123633828-123660829	1	+	123645484	123660235	0	12	44,107,164,63,30,29,75,54,69,136,37,664,	0,11626,14134,17165,18703,18878,21095,21942,25687,25966,26217,26337,
#Partially deleted in new
chr12	123633828	123651156	chr12:123633828-123651156	0	+	123633828	123633828	8553170	5	44,80,107,164,163,	0,5435,11626,14134,17165,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	123633828	123655796	chr12:123633828-123655796	0	+	123633859	123655796	789624	10	44,80,45,107,164,63,30,29,75,26,	0,5435,6128,11626,14134,17165,18703,18878,21095,21942,
#Partially deleted in new
chr12	123633828	123654998	chr12:123633828-123654998	0	+	123633859	123654998	789624	8	44,50,107,164,63,30,29,75,	0,5465,11626,14134,17165,18703,18878,21095,
#Partially deleted in new
chr12	123633828	123648396	chr12:123633828-123648396	0	+	123633828	123633828	8553170	3	44,107,434,	0,11626,14134,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	123633828	123662606	chr12:123633828-123662606	3	+	123633859	123660235	0	13	44,80,107,164,63,30,29,75,54,69,136,37,2441,	0,5435,11626,14134,17165,18703,18878,21095,21942,25687,25966,26217,26337,
#Partially deleted in new
chr12	123633832	123654970	chr12:123633832-123654970	0	+	123633832	123633832	8553170	8	40,80,107,164,63,38,29,47,	0,5431,11622,14130,17161,18691,18874,21091,
#Partially deleted in new
chr12	123633844	123660212	chr12:123633844-123660212	0	+	123633859	123660212	789624	11	28,80,107,164,63,30,29,69,136,37,47,	0,5419,11610,14118,17149,18687,18862,25671,25950,26201,26321,
#Partially deleted in new
chr12	123639262	123660250	chr12:123639262-123660250	0	+	123645484	123659859	789624	12	81,107,164,63,30,29,75,54,46,136,37,85,	0,6192,8700,11731,13269,13444,15661,16508,20167,20532,20783,20903,
#Partially deleted in new
chr12	123639263	123659830	chr12:123639263-123659830	0	+	123645484	123659830	789624	8	80,107,164,63,30,29,46,36,	0,6191,8699,11730,13268,13443,20166,20531,
#Partially deleted in new
chr12	123648050	123660232	chr12:123648050-123660232	0	+	123648050	123660232	789624	9	76,63,30,29,75,69,136,37,67,	0,2943,4481,4656,6873,11465,11744,11995,12115,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	123649067	123650485	chr12:123649067-123650485	3	+	123649067	123649067	8553170	1	1418,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	123655527	123656128	chr12:123655527-123656128	3	+	123655527	123655527	8553170	1	601,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	123659362	123660628	chr12:123659362-123660628	0	+	123659362	123659362	8553170	4	222,136,37,463,	0,432,683,803,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr12	123671112	123708403	chr12:123671112-123708403	3	+	123671240	123707713	789624	18	210,108,77,196,101,200,127,142,66,135,78,81,112,107,157,126,89,800,	0,394,943,2502,8076,15723,16938,19420,21545,23729,24107,25302,25974,28591,33419,35613,35872,36491,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr12	123671112	123708007	chr12:123671112-123708007	1	+	123671240	123707713	789624	18	210,108,77,193,101,200,127,142,66,135,78,81,112,107,157,126,89,404,	0,394,943,2505,8076,15723,16938,19420,21545,23729,24107,25302,25974,28591,33419,35613,35872,36491,
#Partially deleted in new
chr12	123671112	123673749	chr12:123671112-123673749	0	+	123671240	123671581	789624	4	236,108,77,135,	0,394,943,2502,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	123695039	123707235	chr12:123695039-123707235	0	+	123695039	123695039	8553170	6	2159,107,118,157,126,251,	0,4664,4997,9492,11686,11945,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	123707601	123708386	chr12:123707601-123708386	3	-	123707601	123707601	8553170	2	176,145,	0,640,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr12	123712317	123761755	chr12:123712317-123761755	3	+	123712565	123758032	789624	20	365,79,98,138,89,127,83,94,213,151,137,188,91,119,211,120,120,118,172,3829,	0,6305,10033,12336,13879,15465,21608,23213,24741,31467,31883,32279,32564,35289,36257,38792,39965,42102,44497,45609,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	123712355	123737502	chr12:123712355-123737502	0	+	123712355	123712355	8553170	9	327,79,98,138,89,127,83,94,444,	0,6267,9995,12298,13841,15427,21570,23175,24703,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	123712355	123737687	chr12:123712355-123737687	1	+	123712565	123737352	789624	10	327,79,98,138,89,127,83,94,444,141,	0,6267,9995,12298,13841,15427,21570,23175,24703,25191,
#Deleted in new
chr12	123721245	123721639	chr12:123721245-123721639	7	-	123721245	123721245	16724991	1	394,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	123723209	123744645	chr12:123723209-123744645	0	+	123724749	123744645	789624	9	1582,89,127,83,94,213,151,137,49,	0,2987,4573,10716,12321,13849,20575,20991,21387,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	123730641	123744963	chr12:123730641-123744963	0	+	123730641	123730641	8553170	7	3367,94,213,151,137,188,82,	0,4889,6417,13143,13559,13955,14240,
#Partially deleted in new
chr12	123738958	123747726	chr12:123738958-123747726	0	+	123738958	123738958	8553170	6	55,151,137,188,91,120,	0,4826,5242,5638,5923,8648,
#Partially deleted in new
chr12	123749995	123758015	chr12:123749995-123758015	0	+	123752387	123758015	789624	5	1234,120,118,172,89,	0,2287,4424,6819,7931,
#Partially deleted in new
chr12	123753990	123758220	chr12:123753990-123758220	1	+	123754398	123758032	789624	3	547,172,294,	0,2824,3936,
#Deleted in new
chr12	123754245	123754794	chr12:123754245-123754794	3	-	123754245	123754245	8553170	1	549,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	123756326	123758687	chr12:123756326-123758687	0	+	123756326	123756326	8553170	2	660,761,	0,1600,
#Partially deleted in new
chr12	123762187	123936206	chr12:123762187-123936206	1	+	123762336	123935481	789624	78	363,84,98,109,116,220,158,231,191,199,195,177,126,173,152,165,208,157,477,159,117,103,179,212,154,234,123,234,224,270,184,135,153,189,147,192,119,159,136,123,135,217,120,146,153,261,173,94,168,189,172,204,81,198,162,175,182,137,218,222,148,280,230,274,105,155,155,184,201,210,96,172,132,212,168,181,146,872,	0,5418,9413,10646,11961,18892,20919,21759,23558,25616,27739,34468,37058,38028,39093,41473,42645,46609,50976,51566,56762,56960,58392,64499,68358,70926,73218,76268,79134,83412,83783,85773,86542,88700,91018,94868,96962,98824,102407,103763,105279,105715,108178,109269,111370,113043,115548,117076,117446,119437,124954,131045,132455,135582,136465,140751,147073,148348,150910,152141,152664,154269,155396,156488,161575,162090,162862,164449,166199,167087,167476,168214,169153,169448,169753,171143,172433,173147,
#Partially deleted in new
chr12	123762494	123813661	chr12:123762494-123813661	1	+	123781187	123813661	789624	20	56,84,98,109,116,220,158,231,191,199,195,171,177,126,173,152,165,208,157,498,	0,5111,9106,10339,11654,18585,20612,21452,23251,25309,27432,31447,34161,36751,37721,38786,41166,42338,46302,50669,
#Partially deleted in new
chr12	123762494	123935718	chr12:123762494-123935718	3	+	123762519	123935481	789624	78	56,84,98,109,116,220,158,231,191,199,195,177,126,173,152,165,208,157,477,159,117,103,179,212,154,234,123,234,224,270,184,135,153,189,147,192,119,159,136,123,135,217,120,146,153,261,173,94,168,189,172,204,81,198,162,175,182,137,218,222,148,280,230,274,105,155,155,184,201,210,96,172,132,212,168,181,146,384,	0,5111,9106,10339,11654,18585,20612,21452,23251,25309,27432,34161,36751,37721,38786,41166,42338,46302,50669,51259,56455,56653,58085,64192,68051,70619,72911,75961,78827,83105,83476,85466,86235,88393,90711,94561,96655,98517,102100,103456,104972,105408,107871,108962,111063,112736,115241,116769,117139,119130,124647,130738,132148,135275,136158,140444,146766,148041,150603,151834,152357,153962,155089,156181,161268,161783,162555,164142,165892,166780,167169,167907,168846,169141,169446,170836,172126,172840,
#Partially deleted in new
chr12	123781103	123814257	chr12:123781103-123814257	0	+	123781103	123781103	8553170	14	196,158,231,191,199,195,177,126,173,152,165,208,157,1094,	0,2003,2843,4642,6700,8823,15552,18142,19112,20177,22557,23729,27693,32060,
#Partially deleted in new
chr12	123781126	123813898	chr12:123781126-123813898	0	+	123781126	123781126	8553170	15	173,158,231,191,199,195,171,177,126,173,152,165,208,157,735,	0,1980,2820,4619,6677,8800,12815,15529,18119,19089,20154,22534,23706,27670,32037,
#Partially deleted in new
chr12	123835438	123882237	chr12:123835438-123882237	0	+	123835438	123861006	789624	21	90,234,224,270,184,135,153,189,147,192,119,174,136,123,135,217,120,173,94,168,613,	0,3017,5883,10161,10532,12522,13291,15449,17767,21617,23711,25558,29156,30512,32028,32464,34927,42297,43825,44195,46186,
#Partially deleted in new
chr12	123908312	123914550	chr12:123908312-123914550	0	+	123908356	123914550	789624	5	244,182,137,218,222,	0,948,2223,4785,6016,
#Partially deleted in new
chr12	123918659	123943495	chr12:123918659-123943495	0	-	123918659	123918659	8553170	3	363,42,149,	0,24084,24687,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	123922921	123944369	chr12:123922921-123944369	0	-	123922921	123922921	8553170	4	1367,42,147,98,	0,19822,20425,21350,
#Partially deleted in new
chr12	123925134	123935713	chr12:123925134-123935713	0	+	123925134	123925134	8553170	11	70,184,201,210,910,132,212,168,181,146,379,	0,1502,3252,4140,4529,6206,6501,6806,8196,9486,10200,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	123925460	123934984	chr12:123925460-123934984	3	-	123925460	123925460	8553170	2	5083,920,	0,8604,
#Partially deleted in new
chr12	123926765	123929739	chr12:123926765-123929739	0	+	123926765	123926765	8553170	3	55,201,465,	0,1621,2509,
#Deleted in new
chr12	123931790	123933439	chr12:123931790-123933439	0	+	123931790	123932638	789624	4	57,168,114,109,	0,150,827,1540,
#Partially deleted in new
chr12	123935621	123972824	chr12:123935621-123972824	1	-	123937057	123944305	789624	5	2209,42,147,93,296,	0,7122,7725,8650,36907,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	123936416	123946773	chr12:123936416-123946773	1	-	123937057	123943476	789624	3	1414,42,3427,	0,6327,6930,
#Partially deleted in new
chr12	123936435	123972734	chr12:123936435-123972734	3	-	123937057	123943476	789624	4	1395,42,147,206,	0,6308,6911,36093,
#Partially deleted in new
chr12	123937687	123972051	chr12:123937687-123972051	0	-	123937687	123944305	789624	7	143,42,147,93,72,97,157,	0,5056,5659,6584,6981,8016,34207,
#Partially deleted in new
chr12	123937713	123972616	chr12:123937713-123972616	0	-	123937713	123943476	789624	5	117,42,147,161,88,	0,5030,5633,18570,34815,
#Partially deleted in new
chr12	123937764	123972090	chr12:123937764-123972090	0	-	123937764	123944305	789624	6	66,42,147,93,161,351,	0,4979,5582,6507,18519,33975,
#Partially deleted in new
chr12	123944269	123972831	chr12:123944269-123972831	0	-	123944269	123944305	789624	3	95,161,303,	0,12014,28259,
#Deleted in new
chr12	123960716	123961244	chr12:123960716-123961244	3	-	123960716	123960716	8553170	1	528,	0,
#Deleted in new
chr12	123962554	123962817	chr12:123962554-123962817	3	-	123962554	123962554	8553170	1	263,	0,
#Deleted in new
chr12	123966076	123966629	chr12:123966076-123966629	3	-	123966076	123966076	8553170	1	553,	0,
#Deleted in new
chr12	123968022	123968579	chr12:123968022-123968579	3	-	123968022	123968022	8553170	1	557,	0,
#Deleted in new
chr12	123969989	123970344	chr12:123969989-123970344	3	-	123969989	123969989	8553170	1	355,	0,
#Deleted in new
chr12	123971456	123971714	chr12:123971456-123971714	3	-	123971456	123971456	8553170	1	258,	0,
#Partially deleted in new
chr12	123971844	124011808	chr12:123971844-124011808	0	+	123971844	123971844	8553170	5	37,135,96,61,263,	0,2041,16198,39536,39701,
#Partially deleted in new
chr12	123973211	124015426	chr12:123973211-124015426	1	+	124012144	124012930	789624	5	92,135,93,61,3881,	0,674,14834,38169,38334,
#Partially deleted in new
chr12	123973214	124015439	chr12:123973214-124015439	1	+	124012144	124012930	789624	5	138,135,93,61,3894,	0,671,14831,38166,38331,
#Partially deleted in new
chr12	123973214	124011778	chr12:123973214-124011778	0	+	123973214	123973214	8553170	4	138,135,61,233,	0,671,38166,38331,
#Deleted in new
chr12	123973218	123974553	chr12:123973218-123974553	0	+	123973218	123973218	8553170	2	85,668,	0,667,
#Deleted in new
chr12	123973218	123974553	chr12:123973218-123974553	0	+	123973218	123973218	8553170	2	134,668,	0,667,
#Partially deleted in new
chr12	123973240	124316022	chr12:123973240-124316022	2	+	124311853	124314525	789624	5	112,135,197,110,1831,	0,645,176354,338577,340951,
#Partially deleted in new
chr12	123973240	124011650	chr12:123973240-124011650	0	+	123973240	123973240	8553170	6	63,135,93,134,61,105,	0,645,14805,16068,38140,38305,
#Partially deleted in new
chr12	123973244	124235602	chr12:123973244-124235602	0	+	123973244	123973244	8553170	4	59,135,197,58,	0,641,176350,262300,
#Partially deleted in new
chr12	123973272	124011773	chr12:123973272-124011773	0	+	123973272	123973272	8553170	4	31,135,61,228,	0,613,38108,38273,
#Partially deleted in new
chr12	123973274	123988152	chr12:123973274-123988152	0	+	123973274	123973274	8553170	3	29,135,107,	0,611,14771,
#Partially deleted in new
chr12	123973294	124015422	chr12:123973294-124015422	1	+	124012144	124012930	789624	5	58,135,96,61,3877,	0,591,14748,38086,38251,
#Partially deleted in new
chr12	123973484	124011703	chr12:123973484-124011703	0	+	123973484	123973484	8553170	5	27,135,93,61,158,	0,401,14561,37896,38061,
#Partially deleted in new
chr12	123973943	124088594	chr12:123973943-124088594	3	+	123973943	124088482	789624	3	77,96,331,	0,14099,114320,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	123997705	124011824	chr12:123997705-124011824	0	+	123997705	123997705	8553170	3	140,61,279,	0,13675,13840,
#Deleted in new
chr12	123997777	123998753	chr12:123997777-123998753	0	+	123997777	123997777	8553170	2	68,357,	0,619,
#Deleted in new
chr12	124005870	124006225	chr12:124005870-124006225	7	-	124005870	124005870	16724991	1	355,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	124085760	124088598	chr12:124085760-124088598	3	+	124085760	124085760	8553170	1	2838,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	124206227	124209018	chr12:124206227-124209018	3	+	124206227	124206227	8553170	2	2068,188,	0,2603,
#Partially deleted in new
chr12	124289163	124316022	chr12:124289163-124316022	1	+	124311853	124314525	789624	3	207,110,1831,	0,22654,25028,
#Partially deleted in new
chr12	124295225	124316024	chr12:124295225-124316024	1	+	124295429	124314525	789624	3	411,110,1833,	0,16592,18966,
#Partially deleted in new
chr12	124311707	124314623	chr12:124311707-124314623	1	+	124311853	124314525	789624	2	220,432,	0,2484,
#Partially deleted in new
chr12	124324414	124535603	chr12:124324414-124535603	1	-	124325401	124495251	789624	47	1169,180,87,54,149,150,194,146,150,428,199,150,150,252,222,355,287,87,141,151,104,105,103,140,165,172,121,589,148,143,63,173,158,99,55,179,91,173,67,53,57,114,180,178,128,222,39,	0,1776,3132,6430,7904,8715,10009,10720,11068,12338,15591,15879,16187,17408,18590,20182,22149,23410,23759,26172,29678,30063,30422,31017,32227,37711,39264,47607,53822,61330,73704,76086,77989,95542,98086,102207,105198,106200,113515,125400,132691,141758,148537,159181,162026,170732,211150,
#Partially deleted in new
chr12	124324414	124495252	chr12:124324414-124495252	3	-	124325401	124495251	789624	47	1169,180,225,54,149,150,194,146,150,428,199,150,150,252,222,355,287,87,141,151,104,105,103,140,141,172,121,589,51,148,143,63,173,158,99,55,179,94,173,67,53,57,114,180,178,128,106,	0,1776,2994,6430,7904,8715,10009,10720,11068,12338,15591,15879,16187,17408,18590,20182,22149,23410,23759,26172,29678,30063,30422,31017,32227,37711,39264,47607,49998,53822,61330,73704,76086,77989,95542,98086,102207,105198,106200,113515,125400,132691,141758,148537,159181,162026,170732,
#Partially deleted in new
chr12	124324415	124422554	chr12:124324415-124422554	1	-	124325401	124422554	789624	36	1168,180,225,54,149,150,194,146,150,428,199,150,150,252,222,355,287,87,141,151,104,105,103,140,165,172,121,589,51,148,143,63,173,158,99,54,	0,1775,2993,6429,7903,8714,10008,10719,11067,12337,15590,15878,16186,17407,18589,20181,22148,23409,23758,26171,29677,30062,30421,31016,32226,37710,39263,47606,49997,53821,61329,73703,76085,77988,95541,98085,
#Partially deleted in new
chr12	124324415	124422554	chr12:124324415-124422554	1	-	124325401	124422554	789624	35	1168,180,225,54,149,150,194,146,150,428,199,150,150,252,222,355,287,87,141,151,104,105,103,140,165,172,121,589,148,143,63,173,158,99,54,	0,1775,2993,6429,7903,8714,10008,10719,11067,12337,15590,15878,16186,17407,18589,20181,22148,23409,23758,26171,29677,30062,30421,31016,32226,37710,39263,47606,53821,61329,73703,76085,77988,95541,98085,
#Partially deleted in new
chr12	124324597	124535603	chr12:124324597-124535603	1	-	124325401	124495251	789624	47	986,180,225,54,149,150,194,146,150,428,199,150,150,252,222,355,287,87,141,151,104,105,103,140,165,172,121,589,148,143,63,173,158,99,55,179,91,173,67,53,57,114,180,178,128,222,39,	0,1593,2811,6247,7721,8532,9826,10537,10885,12155,15408,15696,16004,17225,18407,19999,21966,23227,23576,25989,29495,29880,30239,30834,32044,37528,39081,47424,53639,61147,73521,75903,77806,95359,97903,102024,105015,106017,113332,125217,132508,141575,148354,158998,161843,170549,210967,
#Partially deleted in new
chr12	124325379	124332345	chr12:124325379-124332345	0	-	124325553	124332345	789624	5	204,191,87,54,27,	0,800,2167,5465,6939,
#Partially deleted in new
chr12	124325385	124334646	chr12:124325385-124334646	0	-	124325385	124325385	8553170	6	198,180,54,146,150,223,	0,805,5459,6933,7744,9038,
#Deleted in new
chr12	124325419	124327585	chr12:124325419-124327585	0	-	124325553	124327585	789624	3	164,191,177,	0,760,1989,
#Deleted in new
chr12	124326122	124327659	chr12:124326122-124327659	0	-	124326122	124326122	8553170	2	248,251,	0,1286,
#Partially deleted in new
chr12	124328531	124333256	chr12:124328531-124333256	0	-	124329083	124333256	789624	4	626,54,149,127,	0,2313,3787,4598,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	124331474	124336392	chr12:124331474-124336392	0	-	124331474	124331474	8553170	4	993,150,857,910,	0,1655,2949,4008,
#Deleted in new
chr12	124334343	124335181	chr12:124334343-124335181	0	-	124334343	124334343	8553170	2	274,47,	0,791,
#Partially deleted in new
chr12	124337103	124341863	chr12:124337103-124341863	0	-	124337103	124341863	789624	4	77,199,150,41,	0,2902,3190,4719,
#Deleted in new
chr12	124337180	124337242	chr12:124337180-124337242	3	-	124337180	124337180	5263520	1	62,	0,
#Partially deleted in new
chr12	124340006	124342055	chr12:124340006-124342055	0	-	124340006	124342055	789624	4	198,150,93,233,	0,287,595,1816,
#Partially deleted in new
chr12	124346592	124567464	chr12:124346592-124567464	0	-	124346592	124495251	789624	33	258,87,141,151,104,105,103,140,165,172,121,589,51,148,143,63,173,158,99,55,179,94,173,67,53,57,114,180,178,128,222,47,157,	0,1232,1581,3994,7500,7885,8244,8839,10049,15533,17086,25429,27820,31644,39152,51526,53908,55811,73364,75908,80029,83020,84022,91337,103222,110513,119580,126359,137003,139848,148554,188972,220715,
#Deleted in new
chr12	124347401	124348940	chr12:124347401-124348940	0	-	124347401	124347401	8553170	2	510,767,	0,772,
#Partially deleted in new
chr12	124354836	124356850	chr12:124354836-124356850	0	-	124354836	124354836	8553170	3	103,140,209,	0,595,1805,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	124355058	124356685	chr12:124355058-124356685	0	-	124355058	124355058	8553170	2	513,44,	0,1583,
#Partially deleted in new
chr12	124372459	124388824	chr12:124372459-124388824	0	-	124372459	124388730	789624	4	151,148,143,140,	0,5777,13285,16225,
#Partially deleted in new
chr12	124383380	124383510	chr12:124383380-124383510	7	+	124383380	124383380	16724991	1	130,	0,
#Partially deleted in new
chr12	124419958	124518294	chr12:124419958-124518294	0	-	124419958	124495251	789624	14	97,55,179,94,173,67,53,57,114,180,178,128,222,155,	0,2542,6663,9654,10656,17971,29856,37147,46214,52993,63637,66482,75188,98181,
#Partially deleted in new
chr12	124429394	124430641	chr12:124429394-124430641	0	-	124429394	124429394	8553170	2	312,27,	0,1220,
#Partially deleted in new
chr12	124430609	124483774	chr12:124430609-124483774	0	-	124430610	124483774	789624	7	178,67,53,57,114,180,179,	0,7320,19205,26496,35563,42342,52986,
#Partially deleted in new
chr12	124430640	124483769	chr12:124430640-124483769	0	-	124430640	124483769	789624	6	147,67,53,114,180,174,	0,7289,19174,35532,42311,52955,
#Partially deleted in new
chr12	124486373	124567589	chr12:124486373-124567589	0	-	124486373	124486373	8553170	4	195,222,47,282,	0,8773,49191,80934,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	124513221	124514813	chr12:124513221-124514813	3	+	124513221	124513221	8553170	2	476,806,	0,786,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	124529721	124530228	chr12:124529721-124530228	3	-	124529721	124529721	8553170	1	507,	0,
#Deleted in new
chr12	124537843	124539677	chr12:124537843-124539677	3	+	124537843	124537843	8553170	1	1834,	0,
#Deleted in new
chr12	124542502	124542873	chr12:124542502-124542873	3	+	124542502	124542502	8553170	1	371,	0,
#Deleted in new
chr12	124555904	124556432	chr12:124555904-124556432	3	+	124555904	124555904	8553170	1	528,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	124561868	124562283	chr12:124561868-124562283	3	+	124561868	124561868	8553170	1	415,	0,
#Deleted in new
chr12	124593180	124593691	chr12:124593180-124593691	3	-	124593180	124593180	8553170	1	511,	0,
#Deleted in new
chr12	124622289	124623069	chr12:124622289-124623069	3	-	124622289	124622289	8553170	1	780,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	124623390	124623987	chr12:124623390-124623987	3	+	124623390	124623390	8553170	1	597,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	124637998	124638444	chr12:124637998-124638444	3	-	124637998	124637998	8553170	1	446,	0,
#Deleted in new
chr12	124725523	124725934	chr12:124725523-124725934	3	+	124725523	124725523	8553170	1	411,	0,
#Partially deleted in new
chr12	124776855	124863917	chr12:124776855-124863917	1	-	124778466	124863720	789624	12	1731,147,52,74,119,167,116,96,204,142,158,323,	0,9501,10550,18339,23268,30905,33318,35014,37346,38117,40694,86739,
#Partially deleted in new
chr12	124777632	124863847	chr12:124777632-124863847	3	-	124782682	124863720	789624	13	954,129,147,52,74,119,167,116,96,204,142,158,253,	0,5050,8724,9773,17562,22491,30128,32541,34237,36569,37340,39917,85962,
#Partially deleted in new
chr12	124777632	124863846	chr12:124777632-124863846	1	-	124778578	124863720	789624	12	954,397,52,74,119,167,116,96,204,142,158,252,	0,8474,9773,17562,22491,30128,32541,34237,36569,37340,39917,85962,
#Partially deleted in new
chr12	124777872	124786493	chr12:124777872-124786493	0	-	124777872	124777872	8553170	2	714,137,	0,8484,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	124778277	124863863	chr12:124778277-124863863	0	-	124778277	124778277	8553170	12	309,3821,52,74,119,167,116,96,204,142,158,269,	0,4405,9128,16917,21846,29483,31896,33592,35924,36695,39272,85317,
#Partially deleted in new
chr12	124778498	124863783	chr12:124778498-124863783	1	-	124782682	124863720	789624	13	88,129,63,52,74,119,167,116,96,204,142,158,189,	0,4184,7942,8907,16696,21625,29262,31675,33371,35703,36474,39051,85096,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr12	124782682	124880461	chr12:124782682-124880461	0	-	124782682	124782682	8553170	13	129,147,52,74,119,167,116,96,204,142,158,149,292,	0,3674,4723,12512,17441,25078,27491,29187,31519,32290,34867,84306,97487,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	124785819	124817707	chr12:124785819-124817707	1	-	124786095	124817671	789624	10	684,52,74,119,167,116,96,204,142,158,	0,1586,9375,14304,21941,24354,26050,28382,29153,31730,
#Partially deleted in new
chr12	124814960	124863863	chr12:124814960-124863863	0	-	124814960	124863720	789624	3	154,158,269,	0,2589,48634,
#Partially deleted in new
chr12	124814963	124882668	chr12:124814963-124882668	0	-	124814963	124814963	8553170	3	151,158,167,	0,2586,67538,
#Partially deleted in new
chr12	124814972	124863896	chr12:124814972-124863896	0	-	124814972	124814972	8553170	4	142,158,118,302,	0,2577,47407,48622,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	124901511	124901611	chr12:124901511-124901611	3	+	124901511	124901511	8553170	1	100,	0,
#Deleted in new
chr12	124911603	124915348	chr12:124911603-124915348	3	-	124911713	124913771	0	1	3745,	0,
#Deleted in new
chr12	124911645	124915303	chr12:124911645-124915303	1	-	124911713	124913771	789624	4	535,454,176,138,	0,1675,2941,3520,
#Deleted in new
chr12	124911647	124915147	chr12:124911647-124915147	1	-	124911713	124913771	0	2	2127,561,	0,2939,
#Deleted in new
chr12	124911703	124914601	chr12:124911703-124914601	1	-	124911713	124913771	789624	3	352,351,15,	0,1720,2883,
#Deleted in new
chr12	124913034	124914074	chr12:124913034-124914074	0	-	124913034	124913771	789624	3	233,279,70,	0,461,970,
#Deleted in new
chr12	124913289	124914141	chr12:124913289-124914141	0	-	124913289	124913771	789624	2	485,137,	0,715,
#Deleted in new
chr12	124913305	124914119	chr12:124913305-124914119	0	-	124913305	124913771	789624	2	469,79,	0,735,
#Deleted in new
chr12	124913322	124914079	chr12:124913322-124914079	0	-	124913322	124913771	789624	2	452,111,	0,646,
#Deleted in new
chr12	124913349	124914065	chr12:124913349-124914065	0	-	124913349	124913349	8553170	2	416,61,	0,655,
#Deleted in new
chr12	124913361	124914443	chr12:124913361-124914443	0	-	124913361	124913771	789624	2	413,146,	0,936,
#Deleted in new
chr12	124913369	124914591	chr12:124913369-124914591	0	-	124913369	124913771	789624	2	405,222,	0,1000,
#Deleted in new
chr12	124913403	124914304	chr12:124913403-124914304	0	-	124913403	124913771	789624	2	371,211,	0,690,
#Deleted in new
chr12	124913586	124915031	chr12:124913586-124915031	0	-	124913586	124913586	8553170	2	179,445,	0,1000,
#Partially deleted in new
chr12	124913586	124917368	chr12:124913586-124917368	0	-	124913586	124913771	789624	3	188,176,153,	0,1000,3629,
#Deleted in new
chr12	124915546	124915659	chr12:124915546-124915659	3	+	124915546	124915546	5263520	1	113,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	124935454	124935895	chr12:124935454-124935895	7	-	124935454	124935454	16724991	1	441,	0,
#Partially deleted in new
chr12	124935487	124935860	chr12:124935487-124935860	5	-	124935487	124935487	16724991	1	373,	0,
#Partially deleted in new
chr12	124946824	124989121	chr12:124946824-124989121	3	-	124947801	124989022	789624	27	1063,98,74,95,138,115,173,117,125,189,107,112,233,77,145,86,96,115,102,114,97,93,149,349,113,170,205,	0,1259,3161,3324,3588,3865,5573,7055,7262,9866,10204,13487,17569,18105,18843,19968,20298,21709,22042,24477,25678,28594,30517,33665,35686,39271,42092,
#Partially deleted in new
chr12	124946824	124953740	chr12:124946824-124953740	0	-	124946824	124946824	8553170	6	1063,98,74,95,392,1343,	0,1259,3161,3324,3588,5573,
#Partially deleted in new
chr12	124946825	124989122	chr12:124946825-124989122	0	-	124946825	124946825	8553170	27	1062,98,74,95,138,115,173,117,125,189,107,112,233,77,145,86,96,115,102,114,97,93,149,349,113,170,206,	0,1258,3160,3323,3587,3864,5572,7054,7261,9865,10203,13486,17568,18104,18842,19967,20297,21708,22041,24476,25677,28593,30516,33664,35685,39270,42091,
#Partially deleted in new
chr12	124946830	124980698	chr12:124946830-124980698	1	-	124947943	124980588	789624	23	1351,74,95,138,115,173,117,125,189,107,112,233,77,145,86,96,115,102,114,97,93,149,209,	0,3155,3318,3582,3859,5567,7049,7256,9860,10198,13481,17563,18099,18837,19962,20292,21703,22036,24471,25672,28588,30511,33659,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	124947600	124948615	chr12:124947600-124948615	0	-	124947600	124947600	8553170	2	287,532,	0,483,
#Partially deleted in new
chr12	124964392	124967005	chr12:124964392-124967005	0	-	124964392	124965757	789624	4	234,77,145,213,	0,537,1275,2400,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	124993699	125031231	chr12:124993699-125031231	3	+	124993790	125025430	789624	3	304,103,6241,	0,18834,31291,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	125025433	125027410	chr12:125025433-125027410	3	-	125025433	125025433	789624	1	1977,	0,
#Partially deleted in new
chr12	125056358	125056581	chr12:125056358-125056581	7	-	125056358	125056358	16724991	1	223,	0,
#Partially deleted in new
chr12	125065378	125143320	chr12:125065378-125143320	3	+	125065584	125142229	789624	18	339,104,121,114,98,115,82,148,81,125,65,123,114,126,70,59,203,1229,	0,8497,11112,20951,26047,37300,37621,41742,49098,53262,59326,59523,62782,63956,68624,69415,71283,76713,
#Partially deleted in new
chr12	125065433	125107162	chr12:125065433-125107162	0	+	125065584	125086353	789624	9	284,104,121,275,114,98,115,82,42,	0,8442,11057,12662,20896,25992,37245,37566,41687,
#Partially deleted in new
chr12	125091012	125107154	chr12:125091012-125107154	0	+	125091012	125091012	8553170	5	100,98,115,82,34,	0,413,11666,11987,16108,
#Partially deleted in new
chr12	125092479	125107268	chr12:125092479-125107268	0	+	125092479	125092479	8553170	4	228,115,82,148,	0,10199,10520,14641,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	125100893	125125036	chr12:125100893-125125036	0	+	125100893	125100893	8553170	7	1900,82,148,81,125,65,135,	0,2106,6227,13583,17747,23811,24008,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	125105150	125143316	chr12:125105150-125143316	0	+	125105150	125105150	8553170	11	644,148,81,125,320,114,126,70,59,203,1225,	0,1970,9326,13490,19554,23010,24184,28852,29643,31511,36941,
#Partially deleted in new
chr12	125114420	125142177	chr12:125114420-125142177	0	+	125114420	125114420	8553170	5	137,70,59,203,86,	0,19582,20373,22241,27671,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	125117566	125134853	chr12:125117566-125134853	0	+	125117566	125117566	8553170	7	1199,65,123,114,126,70,60,	0,7138,7335,10594,11768,16436,17227,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	125119857	125143333	chr12:125119857-125143333	0	+	125119857	125119857	8553170	7	4912,123,114,126,70,59,1242,	0,5044,8303,9477,14145,14936,22234,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	125125741	125136795	chr12:125125741-125136795	0	+	125125741	125125741	8553170	5	2533,126,70,59,134,	0,3593,8261,9052,10920,
#Partially deleted in new
chr12	125128545	125143319	chr12:125128545-125143319	0	+	125128545	125128545	8553170	4	915,70,59,1228,	0,5457,6248,13546,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	125135789	125136740	chr12:125135789-125136740	0	+	125135789	125135789	8553170	2	403,79,	0,872,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	125138244	125141711	chr12:125138244-125141711	3	+	125138244	125138244	8553170	1	3467,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	125150057	125151394	chr12:125150057-125151394	3	+	125150057	125150057	8553170	2	528,57,	0,1280,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	125160524	125164918	chr12:125160524-125164918	3	+	125160524	125160524	8553170	1	4394,	0,
#Partially deleted in new
chr12	125186835	125349978	chr12:125186835-125349978	0	+	125186835	125186835	8553170	2	31,527,	0,162616,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	125300935	125301917	chr12:125300935-125301917	3	+	125300935	125300935	8553170	1	982,	0,
#Partially deleted in new
chr12	125326550	125349778	chr12:125326550-125349778	0	+	125326550	125326550	8553170	3	125,101,327,	0,856,22901,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr12	125326615	125662371	chr12:125326615-125662371	3	+	125326623	125654710	789624	9	60,892,147,187,144,206,271,192,8807,	0,22836,88915,192823,257235,317460,324067,325825,326949,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	125349451	125588411	chr12:125349451-125588411	0	+	125349451	125349451	8553170	4	892,147,187,4561,	0,66079,169987,234399,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	125622451	125662377	chr12:125622451-125662377	1	+	125644117	125654710	789624	5	177,206,271,192,8813,	0,21624,28231,29989,31113,
#Partially deleted in new
chr12	125622495	125654817	chr12:125622495-125654817	0	+	125622495	125622495	8553170	5	133,206,271,192,1253,	0,21580,28187,29945,31069,
#Deleted in new
chr12	125808667	125809808	chr12:125808667-125809808	3	+	125808667	125808667	8553170	1	1141,	0,
#Deleted in new
chr12	125858861	125861119	chr12:125858861-125861119	3	+	125858861	125858861	8553170	1	2258,	0,
#Deleted in new
chr12	125900420	125901483	chr12:125900420-125901483	7	-	125900420	125900420	16724991	1	1063,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	125958687	125983374	chr12:125958687-125983374	0	-	125958687	125958687	789624	6	265,240,73,1143,186,171,	0,3054,4323,7512,11123,24516,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	125958689	125983373	chr12:125958689-125983373	3	-	125958689	125958689	8553170	6	263,1342,709,149,186,170,	0,3052,7510,8504,11121,24514,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	125958701	125980448	chr12:125958701-125980448	1	-	125958701	125958701	8553170	6	251,240,3898,149,186,248,	0,3040,4309,8492,11109,21499,
#Partially deleted in new
chr12	126095991	126103935	chr12:126095991-126103935	1	+	126095991	126095991	789624	5	109,127,117,99,191,	0,248,4697,6223,7753,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	126096007	126177632	chr12:126096007-126177632	3	+	126096007	126096007	8553170	10	359,135,95,205,106,78,522,54,131,3808,	0,15083,59188,60577,63742,64113,66491,68990,75583,77817,
#Deleted in new
chr12	126106458	126107047	chr12:126106458-126107047	3	-	126106458	126106458	8553170	1	589,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	126130165	126130865	chr12:126130165-126130865	3	-	126130165	126130165	8553170	1	700,	0,
#Deleted in new
chr12	126141951	126142377	chr12:126141951-126142377	3	+	126141951	126141951	8553170	1	426,	0,
#Partially deleted in new
chr12	126168234	126171666	chr12:126168234-126171666	1	+	126168234	126168234	8553170	4	297,214,50,76,	0,1482,3081,3356,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	126191150	126434227	chr12:126191150-126434227	0	+	126191150	126191150	8553170	10	167,50,597,110,91,100,122,168,43,353,	0,34114,171474,172583,172965,212733,213776,214941,216747,242724,
#Partially deleted in new
chr12	126191262	126361064	chr12:126191262-126361064	3	+	126191262	126191262	8553170	6	55,103,178,64,242,964,	0,166772,166963,167826,168142,168838,
#Partially deleted in new
chr12	126191377	126225314	chr12:126191377-126225314	1	+	126191377	126191377	8553170	2	230,50,	0,33887,
#Partially deleted in new
chr12	126191377	126358629	chr12:126191377-126358629	0	+	126191377	126191377	8553170	4	230,50,103,404,	0,33887,166657,166848,
#Partially deleted in new
chr12	126191508	126360908	chr12:126191508-126360908	1	+	126191508	126191508	8553170	3	99,103,2683,	0,166526,166717,
#Deleted in new
chr12	126359301	126361065	chr12:126359301-126361065	1	+	126359301	126359301	8553170	2	345,965,	0,799,
#Partially deleted in new
chr12	126400791	126405528	chr12:126400791-126405528	3	-	126400791	126400791	8553170	2	904,70,	0,4667,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	126425989	126434008	chr12:126425989-126434008	1	+	126425989	126425989	8553170	3	278,68,134,	0,1210,7885,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	126442480	126472790	chr12:126442480-126472790	3	+	126442480	126442480	789624	12	108,62,169,83,609,108,276,179,350,154,155,205,	0,485,2404,5498,15452,20237,23233,24068,26277,27251,28180,30105,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	126442480	126458301	chr12:126442480-126458301	0	+	126442480	126442480	8553170	5	183,62,169,83,245,	0,485,2404,5498,15576,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	126442525	126469806	chr12:126442525-126469806	0	+	126442525	126442525	8553170	11	63,169,83,201,84,214,108,276,179,350,75,	0,2359,5453,15815,16366,18261,20192,23188,24023,26232,27206,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	126442525	126469806	chr12:126442525-126469806	0	+	126442525	126442525	8553170	10	63,62,169,83,198,108,276,179,350,75,	0,440,2359,5453,15407,20192,23188,24023,26232,27206,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	126444880	126469806	chr12:126444880-126469806	1	+	126444880	126444880	8553170	8	173,83,198,108,276,179,350,75,	0,3098,13052,17837,20833,21668,23877,24851,
#Deleted in new
chr12	126458461	126458792	chr12:126458461-126458792	7	-	126458461	126458461	16724991	1	331,	0,
#Deleted in new
chr12	126510909	126511711	chr12:126510909-126511711	7	-	126510909	126510909	16724991	1	802,	0,
#Deleted in new
chr12	126524247	126524626	chr12:126524247-126524626	7	+	126524247	126524247	16724991	1	379,	0,
#Partially deleted in new
chr12	126610033	126690260	chr12:126610033-126690260	0	-	126610033	126610033	8553170	2	230,226,	0,80001,
#Partially deleted in new
chr12	126616343	126616554	chr12:126616343-126616554	7	-	126616343	126616343	16724991	1	211,	0,
#Partially deleted in new
chr12	126628171	126690322	chr12:126628171-126690322	3	-	126628171	126628171	8553170	3	51,80,288,	0,19198,61863,
#Partially deleted in new
chr12	126652949	126690306	chr12:126652949-126690306	0	-	126652949	126652949	789624	2	138,272,	0,37085,
#Partially deleted in new
chr12	126652965	126690318	chr12:126652965-126690318	3	-	126652965	126652965	789624	3	122,120,284,	0,12479,37069,
#Partially deleted in new
chr12	126663678	126690268	chr12:126663678-126690268	1	-	126663678	126663678	789624	2	420,234,	0,26356,
#Deleted in new
chr12	126675894	126676243	chr12:126675894-126676243	3	-	126675894	126675894	8553170	1	349,	0,
#Deleted in new
chr12	126677261	126677806	chr12:126677261-126677806	3	+	126677261	126677261	8553170	1	545,	0,
#Deleted in new
chr12	126690478	126691918	chr12:126690478-126691918	0	+	126690478	126690478	8553170	2	220,119,	0,1321,
#Partially deleted in new
chr12	126690480	126695832	chr12:126690480-126695832	3	+	126690480	126690480	8553170	3	108,116,316,	0,1319,5036,
#Partially deleted in new
chr12	126726269	126745326	chr12:126726269-126745326	3	+	126726269	126726269	8553170	4	273,991,103,321,	0,16470,18547,18736,
#Partially deleted in new
chr12	126726561	126743044	chr12:126726561-126743044	0	+	126726561	126726561	8553170	2	371,305,	0,16178,
#Partially deleted in new
chr12	126726599	126745528	chr12:126726599-126745528	0	+	126726599	126726599	8553170	2	333,523,	0,18406,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	126729786	126772411	chr12:126729786-126772411	3	-	126729786	126729786	8553170	6	180,41,65,72,197,333,	0,976,2556,16474,18144,42292,
#Partially deleted in new
chr12	126732295	126735398	chr12:126732295-126735398	1	-	126732295	126732295	8553170	2	112,254,	0,2849,
#Partially deleted in new
chr12	126732342	126736831	chr12:126732342-126736831	0	-	126732342	126732342	8553170	2	65,166,	0,4323,
#Partially deleted in new
chr12	126737006	126743017	chr12:126737006-126743017	0	+	126737006	126737006	8553170	2	180,278,	0,5733,
#Deleted in new
chr12	126741664	126746252	chr12:126741664-126746252	1	+	126741664	126741664	8553170	3	591,741,1483,	0,1075,3105,
#Deleted in new
chr12	126742735	126746236	chr12:126742735-126746236	0	+	126742735	126742735	8553170	3	745,150,1231,	0,2034,2270,
#Deleted in new
chr12	126742736	126745332	chr12:126742736-126745332	0	+	126742736	126742736	8553170	3	744,119,327,	0,2033,2269,
#Deleted in new
chr12	126744825	126745331	chr12:126744825-126745331	0	+	126744825	126744825	8553170	2	94,326,	0,180,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	126748055	126772356	chr12:126748055-126772356	1	-	126748055	126748055	8553170	4	72,114,84,278,	0,12876,15359,24023,
#Partially deleted in new
chr12	126752163	126761045	chr12:126752163-126761045	0	-	126752163	126752163	8553170	2	288,114,	0,8768,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	126752340	126772262	chr12:126752340-126772262	1	-	126752340	126752340	8553170	3	111,126,184,	0,8591,19738,
#Deleted in new
chr12	126864464	126865422	chr12:126864464-126865422	7	+	126864464	126864464	16724991	1	958,	0,
#Partially deleted in new
chr12	126869489	126874690	chr12:126869489-126874690	3	-	126869489	126869489	789624	3	1073,179,234,	0,3836,4967,
#Partially deleted in new
chr12	126870100	126874650	chr12:126870100-126874650	0	-	126870100	126870100	8553170	3	462,171,194,	0,3233,4356,
#Partially deleted in new
chr12	126870465	126874665	chr12:126870465-126874665	0	-	126870465	126870465	8553170	3	94,179,209,	0,2860,3991,
#Deleted in new
chr12	126874820	126876232	chr12:126874820-126876232	3	+	126874820	126874820	8553170	2	160,126,	0,1286,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	126912033	126912322	chr12:126912033-126912322	7	+	126912033	126912033	16724991	1	289,	0,
#Partially deleted in new
chr12	126915202	127060397	chr12:126915202-127060397	3	-	126915202	126915202	789624	7	247,253,176,79,95,200,311,	0,7504,7827,60636,85353,116664,144884,
#Partially deleted in new
chr12	126975838	127060401	chr12:126975838-127060401	0	-	126975838	126975838	8553170	4	79,95,200,315,	0,24717,56028,84248,
#Partially deleted in new
chr12	127030527	127060349	chr12:127030527-127060349	0	-	127030527	127030527	8553170	3	100,200,263,	0,1339,29559,
#Deleted in new
chr12	127145071	127146532	chr12:127145071-127146532	3	-	127145071	127145071	8553170	3	177,131,197,	0,632,1264,
#Deleted in new
chr12	127145640	127145989	chr12:127145640-127145989	0	-	127145640	127145640	8553170	2	194,48,	0,301,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	127147148	127150081	chr12:127147148-127150081	3	+	127147148	127147148	8553170	1	2933,	0,
#Partially deleted in new
chr12	127274466	127284283	chr12:127274466-127284283	3	-	127274466	127274466	8553170	4	55,126,401,142,	0,982,8769,9675,
#Partially deleted in new
chr12	127317708	127319986	chr12:127317708-127319986	7	-	127317708	127317708	16724991	4	191,159,293,269,	0,627,840,2009,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	127321354	127321529	chr12:127321354-127321529	3	+	127321354	127321354	8553170	1	175,	0,
#Partially deleted in new
chr12	127324154	127340072	chr12:127324154-127340072	3	-	127324154	127324154	789624	3	651,97,104,	0,9905,15814,
#Deleted in new
chr12	127344257	127344402	chr12:127344257-127344402	7	-	127344257	127344257	16724991	1	145,	0,
#Deleted in new
chr12	127372242	127372669	chr12:127372242-127372669	3	+	127372242	127372242	8553170	1	427,	0,
#Deleted in new
chr12	127462506	127463197	chr12:127462506-127463197	3	+	127462506	127462506	8553170	1	691,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	127598167	127599715	chr12:127598167-127599715	3	+	127598167	127598167	8553170	2	451,105,	0,1443,
#Partially deleted in new
chr12	127624152	127626267	chr12:127624152-127626267	7	+	127624152	127624152	16724991	3	216,163,123,	0,1769,1992,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	127631247	127636119	chr12:127631247-127636119	0	-	127631247	127631247	789624	3	458,45,176,	0,4110,4696,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	127634095	127636095	chr12:127634095-127636095	0	-	127634095	127634095	8553170	3	651,45,152,	0,1262,1848,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	127634095	127636467	chr12:127634095-127636467	3	-	127634095	127634095	8553170	4	673,45,175,66,	0,1262,1848,2306,
#Deleted in new
chr12	127825937	127826286	chr12:127825937-127826286	3	-	127825937	127825937	8553170	1	349,	0,
#Deleted in new
chr12	127876998	127877516	chr12:127876998-127877516	7	-	127876998	127876998	16724991	1	518,	0,
#Deleted in new
chr12	127881616	127882991	chr12:127881616-127882991	0	+	127881616	127881616	8553170	3	115,152,139,	0,939,1236,
#Partially deleted in new
chr12	127881643	127898639	chr12:127881643-127898639	3	+	127881643	127881643	789624	3	88,94,1811,	0,12224,15185,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	127915371	127951510	chr12:127915371-127951510	0	+	127915371	127915371	8553170	3	311,82,1537,	0,29346,34602,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	127915441	127951450	chr12:127915441-127951450	3	+	127915441	127915441	789624	4	241,82,135,1477,	0,29276,33382,34532,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	127915471	127951552	chr12:127915471-127951552	0	+	127915471	127915471	8553170	4	211,60,82,1579,	0,18818,29246,34502,
#Partially deleted in new
chr12	127940594	127950160	chr12:127940594-127950160	3	-	127940594	127940594	8553170	2	141,53,	0,9513,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	128023787	128027166	chr12:128023787-128027166	3	-	128023787	128023787	789624	3	35,341,176,	0,2071,3203,
#Partially deleted in new
chr12	128086984	128118132	chr12:128086984-128118132	3	-	128086984	128086984	789624	4	314,128,140,219,	0,744,25720,30929,
#Partially deleted in new
chr12	128112228	128118130	chr12:128112228-128118130	0	-	128112228	128112228	8553170	3	195,134,217,	0,482,5685,
#Deleted in new
chr12	128118216	128121952	chr12:128118216-128121952	3	+	128118216	128118216	789624	3	561,369,726,	0,2322,3010,
#Deleted in new
chr12	128187933	128191389	chr12:128187933-128191389	0	-	128187933	128187933	8553170	2	410,78,	0,3378,
#Deleted in new
chr12	128188003	128191364	chr12:128188003-128191364	3	-	128188003	128188003	8553170	2	340,187,	0,3174,
#Deleted in new
chr12	128244505	128244573	chr12:128244505-128244573	3	+	128244505	128244505	5263520	1	68,	0,
#Partially deleted in new
chr12	128267402	128707915	chr12:128267402-128707915	3	+	128267402	128706295	789624	9	85,889,147,184,144,206,274,192,2826,	0,147329,276554,348749,402014,426426,428427,429821,437687,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	128288158	128289056	chr12:128288158-128289056	3	+	128288158	128288158	8553170	1	898,	0,
#Deleted in new
chr12	128294091	128294178	chr12:128294091-128294178	3	+	128294091	128294091	5263520	1	87,	0,
#Partially deleted in new
chr12	128399977	128404814	chr12:128399977-128404814	3	+	128399977	128399977	8553170	2	203,361,	0,4476,
#Partially deleted in new
chr12	128437777	128439206	chr12:128437777-128439206	7	-	128437777	128437777	16724991	2	370,366,	0,1063,
#Partially deleted in new
chr12	128793190	128823983	chr12:128793190-128823983	3	-	128794195	128823943	789624	8	1166,159,156,169,78,169,296,586,	0,6068,7663,15597,16205,16752,21584,30207,
#Partially deleted in new
chr12	128793194	128823779	chr12:128793194-128823779	0	-	128809436	128823779	789624	7	1162,159,156,169,78,296,382,	0,6064,7659,15593,16201,21580,30203,
#Partially deleted in new
chr12	128793894	128801701	chr12:128793894-128801701	0	-	128793894	128793894	8553170	3	462,159,848,	0,5364,6959,
#Partially deleted in new
chr12	128794172	128810358	chr12:128794172-128810358	0	-	128794172	128794172	8553170	5	184,159,156,169,963,	0,5086,6681,14615,15223,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	128800806	128815928	chr12:128800806-128815928	0	-	128800806	128800806	8553170	4	203,169,78,1154,	0,7981,8589,13968,
#Partially deleted in new
chr12	128808805	128823522	chr12:128808805-128823522	0	-	128810007	128823522	789624	5	151,78,111,296,125,	0,590,1137,5969,14592,
#Partially deleted in new
chr12	128809080	128823593	chr12:128809080-128823593	0	-	128809080	128809080	8553170	4	64,78,296,196,	0,315,5694,14317,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	128813185	128814750	chr12:128813185-128814750	3	-	128813185	128813185	8553170	1	1565,	0,
#Partially deleted in new
chr12	128814959	128819867	chr12:128814959-128819867	0	-	128814959	128814959	8553170	2	111,340,	0,4568,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	128826835	128827579	chr12:128826835-128827579	3	+	128826835	128826835	8553170	1	744,	0,
#Partially deleted in new
chr12	128853426	128984956	chr12:128853426-128984956	0	+	128853581	128926400	789624	11	223,149,106,37,57,96,50,44,121,99,2028,	0,22487,35212,58997,61506,72932,73678,91899,93911,104118,129502,
#Partially deleted in new
chr12	128853493	128984956	chr12:128853493-128984956	3	+	128853581	128983090	789624	12	156,149,106,52,37,57,96,50,44,121,99,2028,	0,22420,35145,45742,58930,61439,72865,73611,91832,93844,104051,129435,
#Partially deleted in new
chr12	128853535	128984968	chr12:128853535-128984968	1	+	128853581	128983090	789624	8	114,149,106,52,44,121,99,2040,	0,22378,35103,45700,91790,93802,104009,129393,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	128853581	128930461	chr12:128853581-128930461	0	+	128853581	128926400	789624	8	68,149,106,37,57,96,50,228,	0,22332,35057,58842,61351,72777,73523,76652,
#Partially deleted in new
chr12	128853602	128984300	chr12:128853602-128984300	0	+	128853602	128914902	789624	10	47,149,106,58,90,96,54,162,99,1372,	0,22311,35036,45633,61297,72756,73502,93694,103942,129326,
#Partially deleted in new
chr12	128864135	128983739	chr12:128864135-128983739	1	+	128864144	128983090	789624	13	44,149,106,52,48,37,57,96,50,44,121,99,811,	0,11778,24503,35100,42771,48288,50797,62223,62969,81190,83202,93409,118793,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	128944273	128945203	chr12:128944273-128945203	7	-	128944273	128944273	16724991	2	507,165,	0,765,
#Partially deleted in new
chr12	129013335	129016663	chr12:129013335-129016663	7	+	129013335	129013335	16724991	2	136,2519,	0,809,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	129071724	129086000	chr12:129071724-129086000	1	-	129073874	129084759	789624	4	3335,192,274,1504,	0,6809,10034,12772,
#Partially deleted in new
chr12	129071725	129903666	chr12:129071725-129903666	3	-	129073874	129903339	789624	9	3334,192,274,206,144,184,147,889,406,	0,6808,10033,12771,137794,265908,459333,628084,831535,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	129109628	129113294	chr12:129109628-129113294	0	+	129109628	129109628	8553170	2	2041,230,	0,3436,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	129110992	129113294	chr12:129110992-129113294	0	+	129110992	129110992	8553170	3	147,250,230,	0,427,2072,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	129111093	129113294	chr12:129111093-129113294	0	+	129111093	129111093	8553170	3	46,250,194,	0,326,2007,
#Deleted in new
chr12	129170091	129170238	chr12:129170091-129170238	3	-	129170091	129170091	8553170	1	147,	0,
#Partially deleted in new
chr12	129208600	129212662	chr12:129208600-129212662	3	+	129208600	129208600	789624	5	353,166,230,119,700,	0,957,1436,2329,3362,
#Deleted in new
chr12	129262344	129262824	chr12:129262344-129262824	3	+	129262344	129262344	8553170	1	480,	0,
#Deleted in new
chr12	129521302	129522763	chr12:129521302-129522763	3	-	129521302	129521302	8553170	2	517,222,	0,1239,
#Partially deleted in new
chr12	129681426	129698227	chr12:129681426-129698227	3	-	129681426	129681426	8553170	3	171,177,44,	0,1465,16757,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	129839927	129840522	chr12:129839927-129840522	3	-	129839927	129839927	8553170	1	595,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	129852207	129854944	chr12:129852207-129854944	3	-	129852207	129852207	8553170	2	1602,384,	0,2353,
#Partially deleted in new
chr12	130024492	130044956	chr12:130024492-130044956	3	-	130024492	130024492	8553170	3	112,143,322,	0,2619,20142,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	130033453	130042342	chr12:130033453-130042342	0	-	130033453	130033453	789624	3	1457,1996,116,	0,1568,8773,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	130033453	130045057	chr12:130033453-130045057	3	-	130033453	130033453	8553170	3	1457,1996,1139,	0,1568,10465,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	130047131	130048376	chr12:130047131-130048376	3	+	130047131	130047131	8553170	2	78,275,	0,970,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	130070324	130072685	chr12:130070324-130072685	3	+	130070324	130070324	8553170	2	1314,399,	0,1962,
#Partially deleted in new
chr12	130121924	130122974	chr12:130121924-130122974	3	-	130121924	130121924	8553170	1	1050,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	130138692	130140768	chr12:130138692-130140768	3	+	130138692	130138692	8553170	1	2076,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	130144314	130162223	chr12:130144314-130162223	3	-	130144314	130144314	8553170	4	9284,216,431,262,	0,10158,11037,17647,
#Deleted in new
chr12	130144953	130145691	chr12:130144953-130145691	3	+	130144953	130144953	8553170	1	738,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	130151592	130161678	chr12:130151592-130161678	0	-	130151592	130151592	789624	4	2006,219,431,1022,	0,2880,3759,9064,
#Partially deleted in new
chr12	130155271	130162144	chr12:130155271-130162144	0	-	130155271	130155271	8553170	2	511,183,	0,6690,
#Partially deleted in new
chr12	130155733	130162256	chr12:130155733-130162256	0	-	130155733	130155733	8553170	3	49,167,295,	0,1310,6228,
#Deleted in new
chr12	130162458	130165739	chr12:130162458-130165739	3	+	130162942	130164688	789624	1	3281,	0,
#Deleted in new
chr12	130162458	130165740	chr12:130162458-130165740	1	+	130163040	130164405	789624	1	3282,	0,
#Deleted in new
chr12	130216806	130217157	chr12:130216806-130217157	7	-	130216806	130216806	16724991	1	351,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	130249678	130266725	chr12:130249678-130266725	3	+	130249678	130249678	8553170	2	340,423,	0,16624,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr12	130337886	130372637	chr12:130337886-130372637	3	+	130342591	130371598	0	21	260,90,112,126,215,122,81,198,112,127,118,115,188,73,201,104,71,154,126,148,1156,	0,4693,5103,7866,8483,9054,10216,11352,11969,16650,17001,17666,19031,19594,23293,23611,24879,25104,29246,33289,33595,
#Partially deleted in new
chr12	130338107	130346548	chr12:130338107-130346548	0	+	130342591	130346548	789624	5	64,90,112,126,179,	0,4472,4882,7645,8262,
#Partially deleted in new
chr12	130338135	130346420	chr12:130338135-130346420	0	+	130342591	130346420	789624	5	88,90,112,126,51,	0,4444,4854,7617,8234,
#Partially deleted in new
chr12	130339461	130346504	chr12:130339461-130346504	0	+	130342591	130346504	789624	5	82,90,112,126,135,	0,3118,3528,6291,6908,
#Partially deleted in new
chr12	130339498	130346405	chr12:130339498-130346405	0	+	130342591	130346405	789624	5	202,90,112,126,36,	0,3081,3491,6254,6871,
#Partially deleted in new
chr12	130342230	130346571	chr12:130342230-130346571	0	+	130342591	130346571	789624	4	439,112,126,202,	0,759,3522,4139,
#Partially deleted in new
chr12	130345305	130349298	chr12:130345305-130349298	0	+	130345305	130345305	8553170	5	573,215,122,81,60,	0,1064,1635,2797,3933,
#Deleted in new
chr12	130350995	130351707	chr12:130350995-130351707	3	-	130350995	130350995	8553170	1	712,	0,
#Partially deleted in new
chr12	130366436	130371383	chr12:130366436-130371383	0	+	130366436	130366436	8553170	3	211,126,208,	0,696,4739,
#Deleted in new
chr12	130383363	130383890	chr12:130383363-130383890	3	+	130383363	130383363	8553170	1	527,	0,
#Partially deleted in new
chr12	130396136	130517865	chr12:130396136-130517865	3	-	130399134	130479013	0	19	3025,135,72,104,169,182,109,159,147,450,152,813,110,77,146,205,105,123,38,	0,3542,10035,11589,16482,17988,26316,32042,38597,40705,42228,45711,49023,54063,55058,60359,82775,110511,121691,
#Partially deleted in new
chr12	130396176	130716281	chr12:130396176-130716281	1	-	130397360	130479013	789624	22	1373,135,72,104,169,182,109,717,159,147,450,152,813,110,77,146,205,51,105,123,135,60,	0,3502,9995,11549,16442,17948,26276,27965,32002,38557,40665,42188,45671,48983,54023,55018,60319,74516,82735,110471,232145,320045,
#Partially deleted in new
chr12	130397309	130407830	chr12:130397309-130407830	0	-	130399803	130407830	789624	4	240,135,72,105,	0,2369,8862,10416,
#Partially deleted in new
chr12	130399750	130414710	chr12:130399750-130414710	0	-	130399750	130399750	8553170	5	63,72,104,169,586,	0,6421,7975,12868,14374,
#Deleted in new
chr12	130419534	130421019	chr12:130419534-130421019	3	-	130419534	130419534	8553170	2	281,134,	0,1351,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	130425003	130430661	chr12:130425003-130430661	3	+	130425003	130425003	8553170	1	5658,	0,
#Partially deleted in new
chr12	130428178	130479016	chr12:130428178-130479016	0	-	130428178	130479013	789624	12	159,147,450,152,813,110,77,146,205,21,51,105,	0,6555,8663,10186,13669,16981,22021,23016,28317,40970,42514,50733,
#Partially deleted in new
chr12	130431646	130517917	chr12:130431646-130517917	0	-	130472200	130479013	789624	14	627,147,450,152,813,110,77,146,205,51,589,105,123,90,	0,3087,5195,6718,10201,13513,18553,19548,24849,39046,40103,47265,75001,86181,
#Partially deleted in new
chr12	130441847	130478963	chr12:130441847-130478963	0	-	130469139	130478963	789624	8	813,110,77,146,205,150,51,52,	0,3312,8352,9347,14648,27172,28845,37064,
#Partially deleted in new
chr12	130456495	130633861	chr12:130456495-130633861	0	-	130456495	130479013	789624	7	205,51,105,123,90,135,57,	0,14197,22416,50152,61332,171826,177309,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	130465007	130466315	chr12:130465007-130466315	3	-	130465007	130465007	8553170	1	1308,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	130470201	130506770	chr12:130470201-130506770	0	-	130470201	130470201	8553170	3	542,105,123,	0,8710,36446,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	130651370	130660651	chr12:130651370-130660651	3	+	130651370	130651370	8553170	3	109,984,618,	0,6452,8663,
#Partially deleted in new
chr12	130658767	130669122	chr12:130658767-130669122	0	+	130658767	130658767	8553170	6	39,188,92,197,152,17,	0,8526,8823,9269,9583,10338,
#Partially deleted in new
chr12	130660214	130667830	chr12:130660214-130667830	0	+	130660214	130660214	8553170	3	216,188,240,	0,7079,7376,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	130667468	130669233	chr12:130667468-130669233	1	+	130667468	130667468	8553170	5	13,82,197,196,128,	0,122,568,882,1637,
#Deleted in new
chr12	130775693	130776546	chr12:130775693-130776546	3	-	130775693	130775693	8553170	1	853,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr12	130789599	130839266	chr12:130789599-130839266	1	-	130791899	130839099	789624	10	2378,111,138,74,109,74,75,100,75,197,	0,8925,11553,11815,17382,19031,23357,32089,37593,49470,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	130790833	130839194	chr12:130790833-130839194	3	-	130796039	130839099	789624	11	1144,126,111,138,74,109,74,75,100,75,125,	0,5161,7691,10319,10581,16148,17797,22123,30855,36359,48236,
#Partially deleted in new
chr12	130798392	130801460	chr12:130798392-130801460	0	-	130798392	130798392	8553170	3	243,138,46,	0,2760,3022,
#Partially deleted in new
chr12	130801253	130827250	chr12:130801253-130827250	0	-	130812339	130827250	789624	8	37,74,109,74,134,75,100,58,	0,161,5728,7377,11056,11703,20435,25939,
#Partially deleted in new
chr12	130810605	130812438	chr12:130810605-130812438	3	+	130810605	130810605	8553170	2	282,305,	0,1528,
#Partially deleted in new
chr12	130810820	130812622	chr12:130810820-130812622	3	-	130810820	130810820	8553170	2	138,179,	0,1623,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	130869735	130869837	chr12:130869735-130869837	3	-	130869735	130869735	8553170	1	102,	0,
#Partially deleted in new
chr12	130871878	130877678	chr12:130871878-130877678	3	+	130872593	130875926	0	7	248,46,85,126,188,171,1797,	0,705,957,1124,2667,3733,4003,
#Partially deleted in new
chr12	130872036	130877676	chr12:130872036-130877676	0	+	130872036	130875926	789624	6	90,85,126,188,171,1795,	0,799,966,2509,3575,3845,
#Partially deleted in new
chr12	130872046	130875709	chr12:130872046-130875709	0	+	130872046	130874570	789624	5	80,85,126,183,98,	0,789,956,2504,3565,
#Deleted in new
chr12	130872065	130873839	chr12:130872065-130873839	0	+	130872065	130872065	8553170	2	61,1004,	0,770,
#Partially deleted in new
chr12	130872065	130876733	chr12:130872065-130876733	1	+	130874562	130875926	789624	6	61,77,126,188,171,852,	0,770,937,2480,3546,3816,
#Partially deleted in new
chr12	130872069	130876281	chr12:130872069-130876281	1	+	130872593	130875926	0	6	560,85,126,188,171,400,	0,766,933,2476,3542,3812,
#Partially deleted in new
chr12	130872069	130875665	chr12:130872069-130875665	0	+	130872069	130872069	8553170	5	57,337,126,188,54,	0,514,933,2476,3542,
#Partially deleted in new
chr12	130872075	130875784	chr12:130872075-130875784	0	+	130872593	130875784	789624	6	51,34,85,126,188,173,	0,508,760,927,2470,3536,
#Partially deleted in new
chr12	130872081	130876234	chr12:130872081-130876234	1	+	130872593	130875780	789624	4	45,46,128,353,	0,502,3573,3800,
#Partially deleted in new
chr12	130872095	130875924	chr12:130872095-130875924	0	+	130872095	130872095	8553170	5	31,129,188,171,43,	0,740,2450,3516,3786,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	130873102	130875639	chr12:130873102-130875639	0	+	130873102	130873102	8553170	2	1631,28,	0,2509,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	130906837	130906949	chr12:130906837-130906949	3	+	130906837	130906837	8553170	1	112,	0,
#Partially deleted in new
chr12	130953906	131141247	chr12:130953906-131141247	3	+	130954465	131139263	789624	25	625,37,84,123,180,255,65,156,60,118,111,76,142,74,124,104,112,154,67,67,92,127,42,93,2080,	0,717,12556,17551,27977,33188,37107,38330,46476,49278,50279,52065,60292,122894,130633,150924,151847,154817,164478,166940,177818,182130,183066,184230,185261,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	130953906	130988219	chr12:130953906-130988219	0	+	130953906	130953906	8553170	5	625,37,5118,180,1125,	0,717,12556,27977,33188,
#Partially deleted in new
chr12	130953978	130967065	chr12:130953978-130967065	0	+	130953978	130953978	8553170	4	553,37,84,34,	0,645,12484,13053,
#Partially deleted in new
chr12	130954392	130992268	chr12:130954392-130992268	0	+	130954465	130992268	789624	7	139,37,84,123,255,65,32,	0,231,12070,17065,32702,36621,37844,
#Partially deleted in new
chr12	130954435	131139288	chr12:130954435-131139288	1	+	130954465	131139263	789624	26	96,37,84,96,123,180,255,65,156,60,118,111,76,142,74,124,104,112,154,67,67,92,127,42,93,121,	0,188,12027,14541,17022,27448,32659,36578,37801,45947,48749,49750,51536,59763,122365,130104,150395,151318,154288,163949,166411,177289,181601,182537,183701,184732,
#Deleted in new
chr12	130956383	130958031	chr12:130956383-130958031	3	-	130956383	130956383	8553170	1	1648,	0,
#Deleted in new
chr12	130962174	130963028	chr12:130962174-130963028	3	+	130962174	130962174	8553170	1	854,	0,
#Partially deleted in new
chr12	130966462	130973359	chr12:130966462-130973359	0	+	130966462	130966462	8553170	3	84,123,283,	0,4995,6614,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	130976785	130978812	chr12:130976785-130978812	3	+	130976785	130976785	8553170	1	2027,	0,
#Partially deleted in new
chr12	130977561	130978768	chr12:130977561-130978768	3	+	130977561	130977561	8553170	2	112,297,	0,910,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	130980666	130981367	chr12:130980666-130981367	3	-	130980666	130980666	8553170	1	701,	0,
#Partially deleted in new
chr12	130986808	130992295	chr12:130986808-130992295	0	+	130986808	130986808	8553170	4	137,255,65,59,	0,286,4205,5428,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	130988311	130990028	chr12:130988311-130990028	3	-	130988311	130988311	8553170	1	1717,	0,
#Partially deleted in new
chr12	130990137	130993976	chr12:130990137-130993976	3	-	130990137	130990137	789624	3	1000,120,157,	0,2211,3682,
#Partially deleted in new
chr12	130990160	130993967	chr12:130990160-130993967	0	-	130990160	130990160	789624	2	977,60,	0,3747,
#Partially deleted in new
chr12	130994152	131014228	chr12:130994152-131014228	0	+	130994152	130994152	8553170	6	108,60,118,111,76,30,	0,6230,9032,10033,11819,20046,
#Partially deleted in new
chr12	130994156	131014269	chr12:130994156-131014269	0	+	130994156	130994156	8553170	6	111,60,118,111,76,71,	0,6226,9028,10029,11815,20042,
#Partially deleted in new
chr12	131002498	131141460	chr12:131002498-131141460	0	+	131002498	131002498	8553170	17	339,118,111,76,142,74,124,104,112,154,67,67,92,127,42,93,2293,	0,686,1687,3473,11700,74302,82041,102332,103255,106225,115886,118348,129226,133538,134474,135638,136669,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	131022768	131024741	chr12:131022768-131024741	3	-	131022768	131022768	8553170	1	1973,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	131025560	131028060	chr12:131025560-131028060	3	-	131025560	131025560	8553170	1	2500,	0,
#Partially deleted in new
chr12	131030569	131035487	chr12:131030569-131035487	3	-	131030569	131030569	8553170	2	206,362,	0,4556,
#Partially deleted in new
chr12	131069212	131141469	chr12:131069212-131141469	0	+	131084642	131137895	789624	13	1678,74,124,104,112,154,67,67,92,127,42,586,2302,	0,7588,15327,35618,36541,39511,49172,51634,62512,66824,67760,68431,69955,
#Partially deleted in new
chr12	131070852	131141469	chr12:131070852-131141469	1	+	131084642	131139263	789624	8	38,74,124,92,127,42,93,2302,	0,5948,13687,60872,65184,66120,67284,68315,
#Partially deleted in new
chr12	131076770	131139263	chr12:131076770-131139263	1	+	131076770	131139263	789624	12	104,124,104,112,154,67,67,92,127,42,93,96,	0,7769,28060,28983,31953,41614,44076,54954,59266,60202,61366,62397,
#Partially deleted in new
chr12	131091911	131108836	chr12:131091911-131108836	0	+	131091911	131091911	8553170	4	193,104,112,113,	0,12919,13842,16812,
#Partially deleted in new
chr12	131120698	131137103	chr12:131120698-131137103	0	+	131120698	131120698	8553170	4	215,92,127,131,	0,11026,15338,16274,
#Partially deleted in new
chr12	131121953	131139489	chr12:131121953-131139489	0	+	131121953	131121953	8553170	6	42,92,127,42,93,322,	0,9771,14083,15019,16183,17214,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	131165010	131212931	chr12:131165010-131212931	3	+	131165010	131165010	789624	5	220,152,234,1140,727,	0,37760,42664,44245,47194,
#Deleted in new
chr12	131207206	131209515	chr12:131207206-131209515	0	+	131207206	131207206	8553170	3	89,234,260,	0,468,2049,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	131235510	131237523	chr12:131235510-131237523	3	+	131235510	131235510	8553170	1	2013,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	131292067	131293176	chr12:131292067-131293176	7	-	131292067	131292067	16724991	1	1109,	0,
#Deleted in new
chr12	131295521	131298218	chr12:131295521-131298218	3	+	131295521	131295521	8553170	1	2697,	0,
#Deleted in new
chr12	131296109	131297972	chr12:131296109-131297972	3	-	131296109	131296109	789624	2	927,388,	0,1475,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	131299639	131299751	chr12:131299639-131299751	7	-	131299639	131299639	16724991	1	112,	0,
#Partially deleted in new
chr12	131347469	131367555	chr12:131347469-131367555	3	+	131347469	131347469	789624	3	192,217,1600,	0,1858,18486,
#Deleted in new
chr12	131366659	131371059	chr12:131366659-131371059	3	+	131366659	131366659	8553170	2	88,444,	0,3956,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	131436446	131436960	chr12:131436446-131436960	3	+	131436446	131436446	8553170	1	514,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	131447336	131455436	chr12:131447336-131455436	3	-	131447336	131447336	8553170	5	196,109,54,66,39,	0,525,6548,7809,8061,
#Partially deleted in new
chr12	131469310	131492951	chr12:131469310-131492951	3	-	131469310	131469310	8553170	3	146,152,195,	0,4996,23446,
#Deleted in new
chr12	131478843	131483034	chr12:131478843-131483034	3	-	131478843	131478843	8553170	1	4191,	0,
#Deleted in new
chr12	131596856	131597115	chr12:131596856-131597115	7	-	131596856	131596856	16724991	1	259,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	131620177	131620765	chr12:131620177-131620765	3	-	131620177	131620177	8553170	1	588,	0,
#Deleted in new
chr12	131621890	131623203	chr12:131621890-131623203	3	-	131621890	131621890	8553170	2	232,385,	0,928,
#Deleted in new
chr12	131645917	131646444	chr12:131645917-131646444	3	+	131645917	131645917	8553170	1	527,	0,
#Deleted in new
chr12	131647112	131648121	chr12:131647112-131648121	3	-	131647112	131647112	8553170	2	417,77,	0,932,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	131661062	131661174	chr12:131661062-131661174	7	+	131661062	131661062	16724991	1	112,	0,
#Deleted in new
chr12	131662595	131664704	chr12:131662595-131664704	3	+	131662595	131662595	8553170	2	634,927,	0,1182,
#Deleted in new
chr12	131667491	131668246	chr12:131667491-131668246	7	+	131667491	131667491	16724991	1	755,	0,
#Partially deleted in new
chr12	131711080	131725609	chr12:131711080-131725609	0	+	131711080	131711080	8553170	4	3113,132,86,205,	0,3741,8373,14324,
#Partially deleted in new
chr12	131711088	131799737	chr12:131711088-131799737	3	+	131711229	131799488	0	18	359,170,132,86,226,113,136,241,132,94,172,231,191,266,126,183,73,315,	0,2982,3733,8365,14316,15851,17204,42034,43279,44297,45384,53367,55029,66976,75374,86089,87948,88334,
#Partially deleted in new
chr12	131711089	131786597	chr12:131711089-131786597	0	+	131711229	131714846	789624	15	358,123,132,86,226,113,136,241,132,94,172,231,191,266,135,	0,2981,3732,8364,14315,15850,17203,42033,43278,44296,45383,53366,55028,66975,75373,
#Partially deleted in new
chr12	131711094	131714495	chr12:131711094-131714495	0	+	131711094	131711094	8553170	2	353,425,	0,2976,
#Partially deleted in new
chr12	131711099	131778181	chr12:131711099-131778181	0	+	131711099	131711099	8553170	12	3854,86,226,113,136,241,132,94,172,231,191,117,	0,8354,14305,15840,17193,42023,43268,44286,45373,53356,55018,66965,
#Partially deleted in new
chr12	131711136	131799602	chr12:131711136-131799602	1	+	131711229	131799488	0	19	311,170,132,86,226,113,136,241,132,94,172,231,191,266,156,126,183,73,180,	0,2934,3685,8317,14268,15803,17156,41986,43231,44249,45336,53319,54981,66928,73936,75326,86041,87900,88286,
#Partially deleted in new
chr12	131723257	131727034	chr12:131723257-131727034	0	+	131723257	131723257	8553170	3	52,226,95,	0,2147,3682,
#Partially deleted in new
chr12	131726988	131753489	chr12:131726988-131753489	0	+	131726988	131726988	8553170	3	64,136,367,	0,1304,26134,
#Partially deleted in new
chr12	131753122	131778195	chr12:131753122-131778195	0	+	131753122	131778195	789624	6	241,132,94,172,191,131,	0,1245,2263,3350,12995,24942,
#Deleted in new
chr12	131756965	131758047	chr12:131756965-131758047	3	-	131756965	131756965	8553170	2	566,100,	0,982,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	131783467	131799737	chr12:131783467-131799737	0	+	131783467	131783467	8553170	5	2452,126,183,73,315,	0,2995,13710,15569,15955,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	131796117	131799682	chr12:131796117-131799682	0	+	131796117	131796117	8553170	3	1243,73,260,	0,2919,3305,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	131801314	131801434	chr12:131801314-131801434	7	-	131801314	131801314	16724991	1	120,	0,
#Partially deleted in new
chr12	131815262	131815368	chr12:131815262-131815368	3	-	131815262	131815262	8553170	1	106,	0,
#Partially deleted in new
chr12	131828392	131851771	chr12:131828392-131851771	3	+	131828494	131851274	789624	10	261,133,130,284,177,85,83,153,258,847,	0,9802,10219,12180,13231,15604,16725,16904,21409,22532,
#Partially deleted in new
chr12	131828405	131841736	chr12:131828405-131841736	0	+	131838631	131841736	789624	4	248,130,284,113,	0,10206,12167,13218,
#Partially deleted in new
chr12	131828539	131840747	chr12:131828539-131840747	0	+	131838287	131840747	789624	4	114,133,130,175,	0,9655,10072,12033,
#Partially deleted in new
chr12	131838055	131851783	chr12:131838055-131851783	1	+	131838287	131851274	789624	9	272,130,284,177,85,83,153,258,859,	0,556,2517,3568,5941,7062,7241,11746,12869,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	131840024	131849981	chr12:131840024-131849981	0	+	131840627	131849981	789624	6	832,177,85,83,153,180,	0,1599,3972,5093,5272,9777,
#Partially deleted in new
chr12	131840735	131845391	chr12:131840735-131845391	0	+	131840735	131840735	8553170	6	121,177,85,98,83,95,	0,888,3261,3800,4382,4561,
#Partially deleted in new
chr12	131841767	131844721	chr12:131841767-131844721	0	+	131841767	131841767	8553170	2	33,725,	0,2229,
#Partially deleted in new
chr12	131844869	131851030	chr12:131844869-131851030	0	+	131845355	131849964	789624	4	331,153,121,106,	0,427,5069,6055,
#Partially deleted in new
chr12	131844960	131850062	chr12:131844960-131850062	0	+	131845355	131850062	789624	3	240,153,261,	0,336,4841,
#Partially deleted in new
chr12	131845294	131851367	chr12:131845294-131851367	1	+	131849977	131851274	789624	3	155,121,443,	0,4644,5630,
#Deleted in new
chr12	131849834	131851332	chr12:131849834-131851332	0	+	131849834	131849834	8553170	2	225,408,	0,1090,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	131857419	131864538	chr12:131857419-131864538	3	+	131857419	131857419	8553170	3	73,106,591,	0,5631,6528,
#Partially deleted in new
chr12	131894650	131923167	chr12:131894650-131923167	3	+	131895001	131921361	0	28	462,93,42,33,37,174,74,102,59,83,51,89,148,61,90,126,149,87,269,194,110,144,185,173,119,158,136,1862,	0,950,1132,12241,12844,13993,14247,14485,15124,15268,15603,16061,17291,18547,19096,19701,20432,20684,21240,21747,22302,22760,23846,24561,24821,25328,26449,26655,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	131896499	131898239	chr12:131896499-131898239	3	+	131896499	131896499	8553170	1	1740,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	131906489	131909996	chr12:131906489-131909996	0	+	131906489	131906489	8553170	7	435,37,174,74,102,59,78,	0,1005,2154,2408,2646,3285,3429,
#Deleted in new
chr12	131908618	131909169	chr12:131908618-131909169	0	+	131908618	131908618	8553170	3	199,74,34,	0,279,517,
#Deleted in new
chr12	131915942	131919385	chr12:131915942-131919385	0	+	131915942	131915942	8553170	5	649,110,144,185,174,	0,1010,1468,2554,3269,
#Deleted in new
chr12	131918301	131921550	chr12:131918301-131921550	0	+	131918301	131918301	8553170	6	380,173,119,158,136,245,	0,910,1170,1677,2798,3004,
#Deleted in new
chr12	131919240	131921951	chr12:131919240-131921951	0	+	131919240	131919240	8553170	3	896,136,646,	0,1859,2065,
#Deleted in new
chr12	131920066	131922281	chr12:131920066-131922281	0	+	131920066	131920066	8553170	2	1169,976,	0,1239,
#Partially deleted in new
chr12	131924735	131929351	chr12:131924735-131929351	3	-	131924735	131924735	8553170	3	31,228,167,	0,3227,4449,
#Partially deleted in new
chr12	131929199	131943859	chr12:131929199-131943859	1	+	131929916	131943586	0	6	181,229,138,103,692,321,	0,707,2975,9973,12092,14339,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	131929222	131945896	chr12:131929222-131945896	3	+	131929722	131943586	0	6	574,229,138,103,692,2358,	0,684,2952,9950,12069,14316,
#Partially deleted in new
chr12	131929241	131941983	chr12:131929241-131941983	0	+	131929916	131941983	789624	5	44,229,138,103,692,	0,665,2933,9931,12050,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	131929275	131943859	chr12:131929275-131943859	1	+	131932030	131943586	789624	5	237,798,103,692,321,	0,2239,9897,12016,14263,
#Partially deleted in new
chr12	131929281	131939275	chr12:131929281-131939275	0	+	131929916	131939275	789624	5	99,62,229,138,103,	0,453,625,2893,9891,
#Partially deleted in new
chr12	131929303	131932680	chr12:131929303-131932680	0	+	131929303	131929303	8553170	3	101,229,506,	0,603,2871,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	131929306	131932833	chr12:131929306-131932833	0	+	131929916	131932833	789624	4	98,229,138,112,	0,600,2868,3415,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	131929588	131932833	chr12:131929588-131932833	0	+	131929722	131932833	789624	4	208,229,138,112,	0,318,2586,3133,
#Partially deleted in new
chr12	131929754	131943857	chr12:131929754-131943857	1	+	131929916	131943586	789624	3	381,138,319,	0,2420,13784,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	131929764	131941422	chr12:131929764-131941422	0	+	131929916	131941422	789624	5	32,229,138,112,131,	0,142,2410,2957,11527,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	131934641	131934928	chr12:131934641-131934928	3	+	131934641	131934641	8553170	1	287,	0,
#Partially deleted in new
chr12	131940926	131943859	chr12:131940926-131943859	0	+	131940926	131940926	8553170	2	1057,321,	0,2612,
#Partially deleted in new
chr12	131949919	132080466	chr12:131949919-132080466	3	+	131960619	132077673	789624	53	117,1370,100,108,386,294,186,141,79,50,58,90,108,191,178,137,170,175,137,187,167,170,243,165,159,95,272,203,170,197,112,144,159,84,135,45,154,242,174,137,57,79,255,46,110,214,236,219,196,125,147,78,3066,	0,10665,29774,31569,32173,36594,37785,40044,40716,41487,42253,44947,55157,56192,56780,61578,63089,63570,63857,67615,68290,70129,71159,73857,75726,77517,78097,79781,80069,82033,87762,88033,93384,93725,94257,94751,94880,95399,95807,100403,100679,103226,103423,105054,105179,112190,112546,114748,116854,117442,119575,126596,127481,
#Partially deleted in new
chr12	131949962	131990675	chr12:131949962-131990675	0	+	131960619	131990675	789624	8	74,1370,97,386,294,186,141,40,	0,10622,29734,32130,36551,37742,40001,40673,
#Partially deleted in new
chr12	131949970	131995012	chr12:131949970-131995012	1	+	131960619	131994979	789624	13	66,1370,111,97,108,386,294,186,141,79,50,58,146,	0,10614,13561,29726,31518,32122,36543,37734,39993,40665,41436,42202,44896,
#Partially deleted in new
chr12	131960584	132081102	chr12:131960584-132081102	1	+	131960619	132077673	789624	52	1370,100,108,386,294,186,141,79,50,58,90,108,191,178,137,170,175,137,187,167,170,243,165,159,95,272,203,170,197,112,144,159,84,135,45,154,242,174,137,57,79,255,46,110,214,236,219,196,125,147,78,3702,	0,19109,20904,21508,25929,27120,29379,30051,30822,31588,34282,44492,45527,46115,50913,52424,52905,53192,56950,57625,59464,60494,63192,65061,66852,67432,69116,69404,71368,77097,77368,82719,83060,83592,84086,84215,84734,85142,89738,90014,92561,92758,94389,94514,101525,101881,104083,106189,106777,108910,115931,116816,
#Partially deleted in new
chr12	132028945	132051016	chr12:132028945-132051016	0	+	132028945	132028945	8553170	14	958,170,197,112,144,159,84,135,45,154,242,174,137,418,	0,1043,3007,8736,9007,14358,14699,15231,15725,15854,16373,16781,21377,21653,
#Deleted in new
chr12	132031223	132031359	chr12:132031223-132031359	3	+	132031223	132031223	789624	1	136,	0,
#Partially deleted in new
chr12	132062594	132080457	chr12:132062594-132080457	0	+	132062594	132077673	789624	7	107,219,175,125,147,78,3057,	0,2073,4200,4767,6900,13921,14806,
#Partially deleted in new
chr12	132064907	132078910	chr12:132064907-132078910	0	+	132064907	132064907	8553170	4	2579,147,78,1510,	0,4587,11608,12493,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	132068098	132078913	chr12:132068098-132078913	0	+	132068098	132068098	8553170	3	1543,78,1513,	0,8417,9302,
#Deleted in new
chr12	132075700	132078910	chr12:132075700-132078910	0	+	132075700	132075700	8553170	2	893,1510,	0,1700,
#Deleted in new
chr12	132077802	132080460	chr12:132077802-132080460	3	-	132077802	132077802	8553170	2	312,183,	0,2475,
#Deleted in new
chr12	132083539	132083779	chr12:132083539-132083779	3	-	132083539	132083539	8553170	1	240,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr12	132084282	132123580	chr12:132084282-132123580	7	+	132084282	132084282	16724991	8	117,95,1308,111,88,182,140,1656,	0,6566,19714,24289,30175,36137,37157,37642,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	132084284	132085797	chr12:132084284-132085797	4	+	132084284	132084284	16724991	3	115,353,393,	0,679,1120,
#Deleted in new
chr12	132084289	132085509	chr12:132084289-132085509	4	+	132084289	132084289	16724991	3	110,353,101,	0,674,1119,
#Partially deleted in new
chr12	132084312	132104897	chr12:132084312-132104897	4	+	132084312	132084312	16724991	3	87,174,520,	0,19684,20065,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	132084319	132108899	chr12:132084319-132108899	4	+	132084319	132084319	16724991	6	80,95,122,174,927,328,	0,6529,7075,19677,20058,24252,
#Partially deleted in new
chr12	132084962	132088520	chr12:132084962-132088520	4	+	132084962	132084962	16724991	2	354,101,	0,3457,
#Partially deleted in new
chr12	132085048	132105069	chr12:132085048-132105069	4	+	132085048	132085048	16724991	3	268,174,503,	0,18948,19518,
#Partially deleted in new
chr12	132085225	132104695	chr12:132085225-132104695	4	+	132085225	132085225	16724991	3	91,174,318,	0,18771,19152,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr12	132090650	132126340	chr12:132090650-132126340	4	+	132090650	132090650	16724991	11	293,174,930,111,65,88,182,140,56,215,487,	0,13346,13724,17921,19117,23807,29769,30789,31274,34543,35203,
#Deleted in new
chr12	132100012	132100820	chr12:132100012-132100820	3	-	132100012	132100012	8553170	1	808,	0,
#Partially deleted in new
chr12	132104020	132127177	chr12:132104020-132127177	5	+	132104020	132104020	16724991	9	1284,94,366,182,140,76,203,194,97,	0,11177,14810,16399,17419,17669,21173,21833,23060,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr12	132118145	132131639	chr12:132118145-132131639	5	+	132118145	132118145	16724991	7	1051,182,140,56,203,194,5264,	0,2274,3294,3779,7048,7708,8230,
#Deleted in new
chr12	132126460	132126764	chr12:132126460-132126764	7	-	132126460	132126460	16724991	1	304,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr12	132136593	132144335	chr12:132136593-132144335	3	-	132139271	132144296	789624	15	2705,135,64,102,117,116,190,146,109,107,72,146,151,215,343,	0,3041,3267,3504,3829,4026,4237,4681,4904,5256,5525,5683,6134,7101,7399,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	132137434	132139973	chr12:132137434-132139973	0	-	132137434	132137434	8553170	2	1864,339,	0,2200,
#Deleted in new
chr12	132139112	132140821	chr12:132139112-132140821	0	-	132139112	132139112	8553170	6	186,135,64,102,117,202,	0,522,748,985,1310,1507,
#Deleted in new
chr12	132139854	132143639	chr12:132139854-132143639	0	-	132139854	132139854	8553170	10	70,102,117,116,590,109,107,72,146,912,	0,243,568,765,976,1643,1995,2264,2422,2873,
#Deleted in new
chr12	132140421	132142880	chr12:132140421-132142880	0	-	132140421	132140421	8553170	7	118,116,190,318,693,146,153,	0,198,409,681,1076,1855,2306,
#Deleted in new
chr12	132141005	132142373	chr12:132141005-132142373	0	-	132141005	132141005	8553170	5	15,146,459,72,97,	0,269,492,1113,1271,
#Deleted in new
chr12	132144447	132152441	chr12:132144447-132152441	3	+	132144488	132152401	789624	15	158,121,107,108,150,100,35,51,112,61,111,161,83,114,160,	0,406,1111,2833,3185,3432,3624,4161,4336,6533,6810,7036,7290,7636,7834,
#Deleted in new
chr12	132144763	132148904	chr12:132144763-132148904	0	+	132144961	132148904	789624	9	211,107,126,108,150,100,35,51,121,	0,795,1476,2517,2869,3116,3308,3845,4020,
#Deleted in new
chr12	132147656	132151617	chr12:132147656-132151617	0	+	132147656	132147656	8553170	7	126,100,35,51,112,111,134,	0,223,415,952,1127,3601,3827,
#Deleted in new
chr12	132150840	132152473	chr12:132150840-132152473	0	+	132150840	132150840	8553170	6	201,111,161,83,114,192,	0,417,643,897,1243,1441,
#Deleted in new
chr12	132169822	132170043	chr12:132169822-132170043	3	+	132169822	132169822	8553170	1	221,	0,
#Deleted in new
chr12	132186734	132189695	chr12:132186734-132189695	3	-	132186734	132186734	789624	2	967,517,	0,2444,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	132190212	132190997	chr12:132190212-132190997	3	+	132190212	132190212	8553170	2	121,270,	0,515,
#Partially deleted in new
chr12	132196371	132206028	chr12:132196371-132206028	1	-	132197106	132203669	789624	7	882,168,96,138,186,151,106,	0,1420,2802,4752,7133,9189,9551,
#Partially deleted in new
chr12	132196508	132329203	chr12:132196508-132329203	3	-	132197106	132329203	789624	11	745,168,96,138,186,118,198,175,167,181,238,	0,1283,2665,4615,6996,51401,61180,64439,65950,89741,132457,
#Partially deleted in new
chr12	132196508	132257742	chr12:132196508-132257742	0	-	132197106	132257742	789624	8	745,168,96,138,186,222,118,54,	0,1283,2665,4615,6996,43998,51401,61180,
#Partially deleted in new
chr12	132197072	132205792	chr12:132197072-132205792	1	-	132197106	132203669	789624	6	181,168,96,138,186,232,	0,719,2101,4051,6432,8488,
#Deleted in new
chr12	132200435	132201287	chr12:132200435-132201287	3	+	132200435	132200435	8553170	1	852,	0,
#Deleted in new
chr12	132201136	132206159	chr12:132201136-132206159	0	-	132201136	132203669	789624	4	125,186,349,237,	0,2368,4226,4786,
#Deleted in new
chr12	132203506	132205802	chr12:132203506-132205802	0	-	132203506	132203669	789624	2	184,440,	0,1856,
#Partially deleted in new
chr12	132247439	132329349	chr12:132247439-132329349	0	-	132247439	132247439	8553170	6	588,198,175,167,181,384,	0,10249,13508,15019,38810,81526,
#Partially deleted in new
chr12	132257850	132275218	chr12:132257850-132275218	0	-	132257850	132257850	8553170	4	36,175,167,204,	0,3097,4608,17164,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	132272692	132275224	chr12:132272692-132275224	0	-	132272692	132272692	8553170	1	2532,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	132275390	132276506	chr12:132275390-132276506	0	+	132275390	132275390	8553170	2	446,276,	0,840,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	132275443	132278329	chr12:132275443-132278329	3	+	132275443	132275443	8553170	3	393,300,1073,	0,787,1813,
#Partially deleted in new
chr12	132277348	132280900	chr12:132277348-132280900	3	+	132277348	132277348	8553170	2	558,2481,	0,1071,
#Deleted in new
chr12	132279255	132280900	chr12:132279255-132280900	3	-	132279255	132279255	8553170	1	1645,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	132282813	132284606	chr12:132282813-132284606	3	+	132282813	132282813	8553170	1	1793,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	132283163	132286471	chr12:132283163-132286471	0	-	132283163	132283163	8553170	3	254,80,222,	0,365,3086,
#Deleted in new
chr12	132329849	132331575	chr12:132329849-132331575	3	+	132329849	132329849	789624	2	359,117,	0,1609,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	132332004	132332432	chr12:132332004-132332432	3	+	132332004	132332004	8553170	1	428,	0,
#Deleted in new
chr12	132351854	132352322	chr12:132351854-132352322	3	+	132351854	132351854	8553170	1	468,	0,
#Deleted in new
chr12	132360733	132361198	chr12:132360733-132361198	3	+	132360733	132360733	8553170	1	465,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	132362809	132363348	chr12:132362809-132363348	3	+	132362809	132362809	8553170	1	539,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	132424503	132425208	chr12:132424503-132425208	3	-	132424503	132424503	8553170	1	705,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	132457159	132460024	chr12:132457159-132460024	3	+	132457159	132457159	8553170	2	244,791,	0,2074,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	132462241	132462856	chr12:132462241-132462856	3	+	132462241	132462241	8553170	1	615,	0,
#Partially deleted in new
chr12	132489550	132585188	chr12:132489550-132585188	3	+	132490570	132583778	789624	17	1311,198,90,36,30,46,316,206,218,57,96,246,133,78,84,205,2218,	0,18602,36183,38402,58452,77930,80375,80784,81756,82737,82976,84768,87248,91888,92190,92511,93420,
#Partially deleted in new
chr12	132489550	132585188	chr12:132489550-132585188	1	+	132490570	132583778	8553170	20	1311,198,90,36,30,46,316,206,69,218,51,96,69,30,72,133,78,84,205,2218,	0,18602,36183,38402,58452,77930,80375,80784,81517,81756,82737,82976,84539,84768,84942,87248,91888,92190,92511,93420,
#Deleted in new
chr12	132507029	132511952	chr12:132507029-132511952	1	+	132508158	132510446	789624	4	56,137,195,2787,	0,222,1126,2136,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	132550728	132554947	chr12:132550728-132554947	3	+	132550728	132550728	8553170	1	4219,	0,
#Partially deleted in new
chr12	132560046	132570104	chr12:132560046-132570104	0	+	132560046	132560046	8553170	3	184,46,179,	0,7434,9879,
#Partially deleted in new
chr12	132560152	132570039	chr12:132560152-132570039	0	+	132560152	132560152	8553170	3	78,46,114,	0,7328,9773,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	132565070	132566425	chr12:132565070-132566425	3	+	132565070	132565070	8553170	1	1355,	0,
#Deleted in new
chr12	132571151	132572594	chr12:132571151-132572594	0	+	132571151	132571151	8553170	3	80,57,68,	0,1136,1375,
#Partially deleted in new
chr12	132571860	132582267	chr12:132571860-132582267	0	+	132571860	132571860	8553170	9	478,96,69,30,72,133,78,84,206,	0,666,2229,2458,2632,4938,9578,9880,10201,
#Partially deleted in new
chr12	132572526	132576861	chr12:132572526-132576861	0	+	132572526	132572526	8553170	4	96,30,72,63,	0,1792,1966,4272,
#Deleted in new
chr12	132581996	132582061	chr12:132581996-132582061	3	+	132581996	132581996	5263520	1	65,	0,
#Deleted in new
chr12	132593030	132593698	chr12:132593030-132593698	3	-	132593030	132593030	8553170	1	668,	0,
#Partially deleted in new
chr12	132603149	132610397	chr12:132603149-132610397	0	-	132604315	132606251	789624	6	255,123,123,131,118,75,	0,1104,1312,1551,2997,7173,
#Partially deleted in new
chr12	132603168	132610374	chr12:132603168-132610374	3	-	132603401	132606251	789624	6	236,123,123,126,118,52,	0,1085,1293,1537,2978,7154,
#Partially deleted in new
chr12	132603168	132610374	chr12:132603168-132610374	0	-	132604927	132606251	789624	6	236,123,123,258,118,52,	0,1085,1293,1537,2978,7154,
#Partially deleted in new
chr12	132604014	132606264	chr12:132604014-132606264	0	-	132604937	132606251	789624	4	362,123,318,118,	0,447,686,2132,
#Partially deleted in new
chr12	132604613	132610543	chr12:132604613-132610543	0	-	132604613	132604613	8553170	3	405,118,221,	0,1533,5709,
#Partially deleted in new
chr12	132605813	132610451	chr12:132605813-132610451	0	-	132605813	132605813	8553170	2	451,129,	0,4509,
#Deleted in new
chr12	132618775	132622386	chr12:132618775-132622386	1	+	132618816	132621972	789624	11	214,136,72,76,97,81,139,131,91,66,768,	0,663,903,1068,1224,1491,1669,2225,2479,2699,2843,
#Deleted in new
chr12	132618779	132622386	chr12:132618779-132622386	1	+	132618816	132621972	789624	11	210,136,72,76,97,81,139,131,91,66,768,	0,659,899,1064,1220,1487,1665,2221,2475,2695,2839,
#Deleted in new
chr12	132618816	132621972	chr12:132618816-132621972	3	+	132618816	132621972	789624	10	173,136,72,76,97,81,139,131,91,498,	0,622,862,1027,1183,1450,1628,2184,2438,2658,
#Deleted in new
chr12	132618816	132621979	chr12:132618816-132621979	1	+	132618816	132621972	789624	12	173,136,72,76,97,81,139,131,91,66,78,82,	0,622,862,1027,1183,1450,1628,2184,2438,2658,2802,3081,
#Deleted in new
chr12	132618816	132621972	chr12:132618816-132621972	1	+	132618816	132621972	789624	10	173,136,76,97,81,139,131,91,66,354,	0,622,1027,1183,1450,1628,2184,2438,2658,2802,
#Deleted in new
chr12	132618816	132621972	chr12:132618816-132621972	1	+	132618816	132621972	789624	9	105,76,97,81,139,131,91,66,354,	0,1027,1183,1450,1628,2184,2438,2658,2802,
#Deleted in new
chr12	132618816	132621972	chr12:132618816-132621972	1	+	132618816	132621972	789624	9	105,136,97,81,139,131,91,66,354,	0,622,1183,1450,1628,2184,2438,2658,2802,
#Deleted in new
chr12	132618816	132621972	chr12:132618816-132621972	1	+	132618816	132621972	789624	11	173,136,76,62,81,144,131,91,66,78,75,	0,622,1027,1218,1450,1628,2184,2438,2658,2802,3081,
#Deleted in new
chr12	132618816	132622340	chr12:132618816-132622340	1	+	132618816	132621509	789624	10	173,136,72,76,97,81,139,131,110,866,	0,622,862,1027,1183,1450,1628,2184,2438,2658,
#Deleted in new
chr12	132621998	132622973	chr12:132621998-132622973	3	-	132621998	132621998	8553170	1	975,	0,
#Deleted in new
chr12	132623752	132625951	chr12:132623752-132625951	0	-	132623752	132623752	8553170	2	1058,1047,	0,1152,
#Partially deleted in new
chr12	132623761	132687359	chr12:132623761-132687359	3	-	132624696	132687315	0	49	1049,90,126,201,194,132,193,133,126,174,205,221,224,177,107,154,141,144,210,213,123,81,103,215,196,158,145,93,149,146,147,103,129,108,213,114,133,120,86,111,108,81,142,155,93,45,81,142,106,	0,1143,1883,2355,8553,8902,10424,12130,14252,15363,17885,18415,18744,19058,19462,19645,20075,25167,25544,25915,33374,33587,34106,35533,37207,37765,40242,40608,41540,43741,44594,44873,45049,48453,48865,49402,49813,51636,51973,52332,52784,53601,53816,55735,56192,56416,56845,57376,63492,
#Partially deleted in new
chr12	132624262	132687347	chr12:132624262-132687347	0	-	132676160	132687315	789624	49	548,90,126,201,194,132,193,133,126,174,205,221,224,177,107,154,141,144,210,213,123,81,807,215,196,158,145,93,149,146,147,103,129,108,213,114,133,120,86,91,108,81,142,155,93,45,81,142,94,	0,642,1382,1854,8052,8401,9923,11629,13751,14862,17384,17914,18243,18557,18961,19144,19574,24666,25043,25414,32873,33086,33605,35032,36706,37264,39741,40107,41039,43240,44093,44372,44548,47952,48364,48901,49312,51135,51472,51831,52283,53100,53315,55234,55691,55915,56344,56875,62991,
#Partially deleted in new
chr12	132624554	132632557	chr12:132624554-132632557	0	-	132624554	132624554	8553170	3	1216,201,243,	0,1562,7760,
#Partially deleted in new
chr12	132624689	132687328	chr12:132624689-132687328	1	-	132624696	132687315	789624	48	121,90,126,201,194,132,193,133,126,174,205,221,224,177,107,154,141,144,210,213,123,81,103,215,196,158,145,93,149,146,147,103,129,108,213,114,133,120,86,111,108,81,142,155,93,45,142,75,	0,215,955,1427,7625,7974,9496,11202,13324,14435,16957,17487,17816,18130,18534,18717,19147,24239,24616,24987,32446,32659,33178,34605,36279,36837,39314,39680,40612,42813,43666,43945,44121,47525,47937,48474,48885,50708,51045,51404,51856,52673,52888,54807,55264,55488,56448,62564,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	132624705	132634168	chr12:132624705-132634168	0	-	132624705	132624705	8553170	6	105,90,126,201,194,1505,	0,199,939,1411,7609,7958,
#Partially deleted in new
chr12	132625297	132632416	chr12:132625297-132632416	0	-	132625297	132625297	8553170	4	122,126,201,102,	0,347,819,7017,
#Partially deleted in new
chr12	132626266	132636000	chr12:132626266-132636000	0	-	132632471	132636000	789624	5	51,174,132,193,109,	0,6048,6397,7919,9625,
#Partially deleted in new
chr12	132626310	132635992	chr12:132626310-132635992	0	-	132632399	132635992	789624	5	7,123,132,193,101,	0,6004,6353,7875,9581,
#Partially deleted in new
chr12	132632447	132639169	chr12:132632447-132639169	0	-	132632447	132632447	8553170	5	61,132,193,133,1156,	0,216,1738,3444,5566,
#Partially deleted in new
chr12	132632507	132635985	chr12:132632507-132635985	0	-	132632507	132632507	8553170	3	288,193,94,	0,1678,3384,
#Deleted in new
chr12	132633970	132636025	chr12:132633970-132636025	0	-	132633970	132633970	8553170	2	408,134,	0,1921,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	132634364	132641378	chr12:132634364-132641378	0	-	132634364	132634364	8553170	5	14,133,126,174,361,	0,1527,3649,4760,6653,
#Deleted in new
chr12	132641373	132642206	chr12:132641373-132642206	0	-	132641373	132641373	8553170	2	478,30,	0,803,
#Deleted in new
chr12	132648545	132649365	chr12:132648545-132649365	0	-	132648545	132648545	8553170	2	527,60,	0,760,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	132649320	132660913	chr12:132649320-132660913	0	-	132649320	132649320	8553170	6	195,213,123,81,103,1619,	0,356,7815,8028,8547,9974,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	132649352	132651407	chr12:132649352-132651407	0	-	132649352	132649352	8553170	3	163,213,1125,	0,324,930,
#Deleted in new
chr12	132672280	132673641	chr12:132672280-132673641	0	-	132672280	132672280	8553170	4	42,260,114,67,	0,299,883,1294,
#Deleted in new
chr12	132672543	132673233	chr12:132672543-132673233	0	-	132672543	132672543	8553170	2	296,70,	0,620,
#Deleted in new
chr12	132672626	132676498	chr12:132672626-132676498	0	-	132672626	132672626	8553170	4	213,114,133,1101,	0,537,948,2771,
#Deleted in new
chr12	132680530	132681279	chr12:132680530-132681279	0	-	132680530	132680530	8553170	2	157,142,	0,607,
#Partially deleted in new
chr12	132681027	132687365	chr12:132681027-132687365	0	-	132681027	132681027	8553170	2	252,112,	0,6226,
#Partially deleted in new
chr12	132687605	132704991	chr12:132687605-132704991	3	+	132687670	132704687	789624	5	187,114,163,120,373,	0,2657,8278,13644,17013,
#Partially deleted in new
chr12	132687641	132704985	chr12:132687641-132704985	1	+	132687670	132704865	789624	3	151,114,367,	0,2621,16977,
#Partially deleted in new
chr12	132688048	132714912	chr12:132688048-132714912	3	+	132688048	132688048	8553170	5	102,114,120,176,55,	0,2214,13201,16570,26809,
#Partially deleted in new
chr12	132690262	132704900	chr12:132690262-132704900	0	+	132690262	132701283	789624	3	114,120,282,	0,10987,14356,
#Partially deleted in new
chr12	132690313	132704898	chr12:132690313-132704898	0	+	132690313	132704818	789624	5	63,163,120,136,280,	0,5570,10936,12115,14305,
#Partially deleted in new
chr12	132695944	132701684	chr12:132695944-132701684	0	+	132695944	132701399	789624	2	102,435,	0,5305,
#Partially deleted in new
chr12	132710818	132719166	chr12:132710818-132719166	1	+	132710876	132718810	0	6	249,179,126,89,134,405,	0,4039,6620,6891,7168,7943,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	132710818	132722734	chr12:132710818-132722734	3	+	132710876	132720828	0	6	249,179,126,89,134,2057,	0,4039,6620,6891,7168,9859,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	132711081	132721314	chr12:132711081-132721314	1	+	132717515	132720828	789624	6	608,179,126,89,134,637,	0,3776,6357,6628,6905,9596,
#Partially deleted in new
chr12	132714752	132721128	chr12:132714752-132721128	1	+	132717515	132720828	789624	5	284,126,89,134,451,	0,2686,2957,3234,5925,
#Deleted in new
chr12	132723944	132724057	chr12:132723944-132724057	7	-	132723944	132723944	16724991	1	113,	0,
#Partially deleted in new
chr12	132725502	132761888	chr12:132725502-132761888	3	-	132727241	132761798	789624	13	1941,132,592,191,107,173,67,123,189,194,207,459,271,	0,2529,4176,8882,9903,11390,15916,17651,22329,22635,25140,29172,36115,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr12	132725667	132761813	chr12:132725667-132761813	0	-	132725667	132725667	8553170	12	1776,132,592,191,107,173,67,123,189,194,207,7139,	0,2364,4011,8717,9738,11225,15751,17486,22164,22470,24975,29007,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	132726805	132732210	chr12:132726805-132732210	1	-	132727241	132730226	789624	3	638,132,2532,	0,1226,2873,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	132727132	132732100	chr12:132727132-132732100	1	-	132727241	132730226	789624	4	311,132,592,1411,	0,899,2546,3557,
#Partially deleted in new
chr12	132727285	132735439	chr12:132727285-132735439	0	-	132727285	132727285	8553170	4	158,132,191,34,	0,746,7099,8120,
#Partially deleted in new
chr12	132727349	132735123	chr12:132727349-132735123	0	-	132727349	132730226	789624	4	94,132,592,739,	0,682,2329,7035,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	132729722	132738907	chr12:132729722-132738907	0	-	132729722	132729722	8553170	4	548,191,107,2015,	0,4662,5683,7170,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	132730232	132742558	chr12:132730232-132742558	0	-	132730232	132730232	8553170	6	38,76,191,107,173,1140,	0,3763,4152,5173,6660,11186,
#Partially deleted in new
chr12	132734967	132743254	chr12:132734967-132743254	0	-	132734967	132734967	8553170	4	545,173,67,101,	0,1925,6451,8186,
#Partially deleted in new
chr12	132735406	132748020	chr12:132735406-132748020	0	-	132741846	132748020	789624	6	106,173,67,83,123,189,	0,1486,6012,6402,7747,12425,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	132737042	132751334	chr12:132737042-132751334	0	-	132737042	132737042	8553170	6	23,67,123,189,194,692,	0,4376,6111,10789,11095,13600,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	132743238	132749027	chr12:132743238-132749027	0	-	132743238	132743238	8553170	4	38,189,194,141,	0,4593,4899,5648,
#Deleted in new
chr12	132745155	132745729	chr12:132745155-132745729	7	+	132745155	132745155	16724991	1	574,	0,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr12	132768908	132828702	chr12:132768908-132828702	3	-	132773104	132822128	789624	24	4386,164,165,123,133,140,117,198,144,217,95,264,78,369,162,138,203,307,112,659,113,273,316,376,	0,5248,6232,7725,8049,8757,11889,13387,15255,17430,17784,20118,22307,26943,27630,29431,32858,35807,38268,38982,44398,47631,53087,59418,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr12	132768914	132822311	chr12:132768914-132822311	1	-	132773104	132822128	789624	23	4380,164,165,123,133,140,117,198,144,217,95,264,78,369,162,138,203,307,112,659,113,273,316,	0,5242,6226,7719,8043,8751,11883,13381,15249,17424,17778,20112,22301,26937,27624,29425,32852,35801,38262,38976,44392,47625,53081,
#Partially deleted in new
chr12	132773259	132776692	chr12:132773259-132776692	0	-	132775110	132776692	789624	4	35,164,240,59,	0,897,1806,3374,
#Partially deleted in new
chr12	132774497	132828853	chr12:132774497-132828853	1	-	132775110	132822128	789624	22	808,123,133,140,117,198,144,217,95,264,78,369,162,138,203,307,112,659,113,273,316,527,	0,2136,2460,3168,6300,7798,9666,11841,12195,14529,16718,21354,22041,23842,27269,30218,32679,33393,38809,42042,47498,53829,
#Partially deleted in new
chr12	132783867	132828840	chr12:132783867-132828840	1	-	132784025	132822128	789624	16	440,217,95,264,78,369,162,138,203,307,112,659,113,273,316,38,	0,2471,2825,5159,7348,11984,12671,14472,17899,20848,23309,24023,29439,32672,38128,44935,
#Partially deleted in new
chr12	132822186	132848192	chr12:132822186-132848192	0	-	132822186	132822186	8553170	6	125,79,73,108,88,108,	0,19331,20824,21840,24856,25898,
#Deleted in new
chr12	132825700	132826184	chr12:132825700-132826184	7	+	132825700	132825700	16724991	1	484,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr12	132832356	132887598	chr12:132832356-132887598	1	-	132841553	132887328	0	18	9240,73,108,88,71,84,120,143,163,155,160,168,93,60,110,100,145,52,	0,10654,11670,14686,15728,16284,19261,21074,24111,25048,26711,29110,29976,38367,39928,45198,54839,55190,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	132835373	132835500	chr12:132835373-132835500	3	-	132835373	132835373	8553170	1	127,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	132840348	132848991	chr12:132840348-132848991	0	-	132840348	132840348	8553170	5	1248,73,108,88,907,	0,2662,3678,6694,7736,
#Partially deleted in new
chr12	132840351	132887603	chr12:132840351-132887603	1	-	132841553	132887328	0	16	1245,73,108,88,71,84,120,143,163,155,160,168,110,100,145,57,	0,2659,3675,6691,7733,8289,11266,13079,16116,17053,18716,21115,31933,37203,46844,47195,
#Partially deleted in new
chr12	132840351	132887623	chr12:132840351-132887623	1	-	132841553	132887328	0	18	1245,73,108,88,71,84,120,143,163,155,160,168,180,60,110,100,145,77,	0,2659,3675,6691,7733,8289,11266,13079,16116,17053,18716,21115,29267,30372,31933,37203,46844,47195,
#Partially deleted in new
chr12	132840351	132847802	chr12:132840351-132847802	0	-	132840351	132840351	8553170	4	1245,73,108,760,	0,2659,3675,6691,
#Partially deleted in new
chr12	132840404	132854104	chr12:132840404-132854104	0	-	132840404	132840404	8553170	8	1192,73,108,88,76,84,117,674,	0,2606,3622,6638,7777,8236,11213,13026,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr12	132840909	132883017	chr12:132840909-132883017	0	-	132848185	132870742	789624	16	687,73,108,88,139,84,120,143,163,155,160,168,60,110,100,88,	0,2101,3117,6133,7175,7731,10708,12521,15558,16495,18158,20557,29814,31375,36645,42020,
#Partially deleted in new
chr12	132840974	132887608	chr12:132840974-132887608	3	-	132841553	132887328	0	18	622,73,108,88,71,84,120,143,163,155,160,168,216,60,110,100,145,62,	0,2036,3052,6068,7110,7666,10643,12456,15493,16430,18093,20492,28644,29749,31310,36580,46221,46572,
#Partially deleted in new
chr12	132841124	132851658	chr12:132841124-132851658	0	-	132847105	132851658	789624	7	472,73,108,88,76,84,41,	0,1886,2902,5918,7057,7516,10493,
#Partially deleted in new
chr12	132841372	132856565	chr12:132841372-132856565	0	-	132848154	132856565	789624	7	224,73,108,88,71,84,98,	0,1638,2654,5670,6712,7268,15095,
#Partially deleted in new
chr12	132841392	132853489	chr12:132841392-132853489	0	-	132841392	132841392	8553170	7	204,73,108,88,71,84,59,	0,1618,2634,5650,6692,7248,12038,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	132848154	132849960	chr12:132848154-132849960	0	-	132848154	132848154	8553170	2	103,1320,	0,486,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	132853636	132855055	chr12:132853636-132855055	0	-	132853636	132853636	8553170	2	79,813,	0,606,
#Partially deleted in new
chr12	132859078	132861904	chr12:132859078-132861904	0	-	132859078	132859078	8553170	2	149,438,	0,2388,
#Partially deleted in new
chr12	132859184	132904894	chr12:132859184-132904894	0	-	132859184	132870742	789624	7	43,168,180,60,110,100,97,	0,2282,10434,11539,13100,18370,45613,
#Partially deleted in new
chr12	132861546	132887532	chr12:132861546-132887532	0	-	132861546	132887328	789624	6	88,180,60,110,100,337,	0,8072,9177,10738,16008,25649,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	132865854	132867958	chr12:132865854-132867958	3	-	132865854	132865854	8553170	1	2104,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	132869618	132909147	chr12:132869618-132909147	0	-	132869618	132870742	789624	6	57,60,110,100,214,372,	0,1105,2666,7936,29381,39157,
#Partially deleted in new
chr12	132869638	132904873	chr12:132869638-132904873	0	-	132869638	132870742	789624	5	196,60,110,100,76,	0,1085,2646,7916,35159,
#Partially deleted in new
chr12	132869723	132956304	chr12:132869723-132956304	0	-	132869723	132870742	789624	6	75,60,110,100,177,62,	0,1000,2561,7831,75897,86519,
#Partially deleted in new
chr12	132870724	132887522	chr12:132870724-132887522	0	-	132870724	132870724	8553170	4	59,110,100,327,	0,1560,6830,16471,
#Partially deleted in new
chr12	132871904	132887564	chr12:132871904-132887564	0	-	132871904	132871904	8553170	4	490,100,145,18,	0,5650,15291,15642,
#Partially deleted in new
chr12	132871972	132887572	chr12:132871972-132887572	0	-	132871972	132871972	8553170	5	216,110,100,145,26,	0,312,5582,15223,15574,
#Partially deleted in new
chr12	132877560	132909186	chr12:132877560-132909186	0	-	132877560	132877560	8553170	2	94,411,	0,31215,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	132887841	132888583	chr12:132887841-132888583	3	+	132887841	132887841	789624	2	91,464,	0,278,
#Partially deleted in new
chr12	132899983	132900368	chr12:132899983-132900368	7	+	132899983	132899983	16724991	1	385,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	132911469	132914732	chr12:132911469-132914732	3	+	132911469	132911469	8553170	1	3263,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	132918307	132956306	chr12:132918307-132956306	3	-	132925372	132945635	789624	5	8855,121,177,123,64,	0,14727,27313,29840,37935,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	132921461	132956306	chr12:132921461-132956306	1	-	132925372	132945635	789624	5	5701,93,121,177,64,	0,11251,11573,24159,34781,
#Partially deleted in new
chr12	132926671	132956291	chr12:132926671-132956291	0	-	132926671	132926671	8553170	4	491,121,177,49,	0,6363,18949,29571,
#Partially deleted in new
chr12	132932811	132956262	chr12:132932811-132956262	0	-	132932811	132932811	8553170	3	344,177,20,	0,12809,23431,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	132944797	132956262	chr12:132944797-132956262	0	-	132944797	132944797	8553170	3	1000,123,20,	0,3350,11445,
#Partially deleted in new
chr12	132945715	132948615	chr12:132945715-132948615	0	-	132945715	132945715	8553170	2	82,468,	0,2432,
#Deleted in new
chr12	132972337	132972890	chr12:132972337-132972890	7	-	132972337	132972337	16724991	1	553,	0,
#Partially deleted in new
chr12	132986364	133006176	chr12:132986364-133006176	0	+	132986364	132986364	8553170	3	509,104,120,	0,1300,19692,
#Partially deleted in new
chr12	132986417	133006190	chr12:132986417-133006190	0	+	132986417	132986417	8553170	2	456,134,	0,19639,
#Partially deleted in new
chr12	132986442	133010216	chr12:132986442-133010216	0	+	132986840	133010216	789624	3	431,127,81,	0,20599,23693,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	132986463	133027103	chr12:132986463-133027103	3	+	132986840	133011481	789624	4	410,127,96,16968,	0,20578,20973,23672,
#Partially deleted in new
chr12	132986467	133010241	chr12:132986467-133010241	0	+	132986840	133010241	789624	5	406,99,127,96,106,	0,15165,20574,20969,23668,
#Partially deleted in new
chr12	132995189	132995302	chr12:132995189-132995302	3	-	132995189	132995189	8553170	1	113,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	133004403	133012127	chr12:133004403-133012127	1	+	133007068	133011481	789624	3	2765,96,1992,	0,3033,5732,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr12	133030388	133036911	chr12:133030388-133036911	3	-	133030388	133030388	8553170	4	150,160,51,143,	0,2756,3664,6380,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	133032658	133037222	chr12:133032658-133037222	1	-	133032658	133032658	789624	3	646,51,454,	0,1394,4110,
#Deleted in new
chr12	133033502	133033956	chr12:133033502-133033956	7	+	133033502	133033502	16724991	1	454,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	133037291	133063298	chr12:133037291-133063298	3	+	133041467	133058932	789624	5	254,198,127,96,6345,	0,3993,10663,11461,19662,
#Partially deleted in new
chr12	133037300	133059606	chr12:133037300-133059606	1	+	133041467	133058932	789624	5	245,383,127,96,2650,	0,3799,10654,11452,19656,
#Partially deleted in new
chr12	133037389	133059606	chr12:133037389-133059606	1	+	133041467	133058932	789624	5	156,205,127,96,2653,	0,3888,10565,11363,19564,
#Partially deleted in new
chr12	133037393	133048818	chr12:133037393-133048818	0	+	133041467	133048818	789624	4	161,205,127,66,	0,3884,10561,11359,
#Partially deleted in new
chr12	133037478	133057425	chr12:133037478-133057425	0	+	133041467	133057425	789624	5	67,198,127,96,472,	0,3806,10476,11274,19475,
#Partially deleted in new
chr12	133037502	133048304	chr12:133037502-133048304	0	+	133037502	133037502	8553170	3	43,205,350,	0,3775,10452,
#Partially deleted in new
chr12	133037524	133048356	chr12:133037524-133048356	0	+	133037524	133037524	8553170	3	30,205,402,	0,3753,10430,
#Partially deleted in new
chr12	133037529	133048775	chr12:133037529-133048775	0	+	133041467	133048775	789624	4	25,383,127,23,	0,3570,10425,11223,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	133037579	133063297	chr12:133037579-133063297	1	+	133041467	133058932	789624	5	390,205,127,96,6344,	0,3698,10375,11173,19374,
#Partially deleted in new
chr12	133038874	133048844	chr12:133038874-133048844	0	+	133041467	133048844	789624	4	138,205,127,92,	0,2403,9080,9878,
#Partially deleted in new
chr12	133038887	133041485	chr12:133038887-133041485	0	+	133041467	133041485	8553170	2	160,386,	0,2212,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	133040433	133048356	chr12:133040433-133048356	0	+	133040433	133040433	8553170	2	1049,402,	0,7521,
#Partially deleted in new
chr12	133041277	133048831	chr12:133041277-133048831	0	+	133041277	133041277	8553170	3	205,152,79,	0,6652,7475,
#Partially deleted in new
chr12	133041277	133057002	chr12:133041277-133057002	1	+	133041467	133050540	789624	5	205,127,96,63,49,	0,6677,7475,9246,15676,
#Partially deleted in new
chr12	133041284	133063304	chr12:133041284-133063304	1	+	133041467	133063278	789624	4	198,127,96,226,	0,6670,7468,21794,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	133047620	133057332	chr12:133047620-133057332	0	+	133047620	133047620	8553170	2	1228,379,	0,9333,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	133073515	133073983	chr12:133073515-133073983	3	-	133073515	133073515	8553170	1	468,	0,
#Deleted in new
chr12	133077761	133078392	chr12:133077761-133078392	3	-	133077761	133077761	8553170	1	631,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	133079837	133107544	chr12:133079837-133107544	3	+	133081320	133106651	789624	5	1235,57,127,96,2035,	0,1435,3265,3628,25672,
#Partially deleted in new
chr12	133080473	133105626	chr12:133080473-133105626	0	+	133081320	133105626	789624	6	78,251,57,127,96,117,	0,348,799,2629,2992,25036,
#Partially deleted in new
chr12	133080874	133105641	chr12:133080874-133105641	0	+	133083195	133105641	789624	4	198,127,96,132,	0,2228,2591,24635,
#Partially deleted in new
chr12	133080881	133107526	chr12:133080881-133107526	1	+	133105586	133106651	789624	4	191,57,75,2017,	0,391,2605,24628,
#Partially deleted in new
chr12	133080915	133084206	chr12:133080915-133084206	0	+	133080915	133080915	8553170	5	157,57,127,96,92,	0,357,2187,2550,3199,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	133080931	133105590	chr12:133080931-133105590	1	+	133081320	133105528	789624	6	141,57,127,99,91,81,	0,341,2171,2531,12483,24578,
#Partially deleted in new
chr12	133080931	133106866	chr12:133080931-133106866	1	+	133081320	133105698	789624	5	141,57,127,96,1242,	0,341,2171,2534,24693,
#Partially deleted in new
chr12	133080964	133105568	chr12:133080964-133105568	0	+	133081320	133083481	789624	6	108,57,82,127,96,59,	0,308,567,2138,2501,24545,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	133081010	133107428	chr12:133081010-133107428	0	+	133081320	133100994	789624	6	62,57,127,96,67,1919,	0,262,2092,2455,19976,24499,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr12	133081584	133105713	chr12:133081584-133105713	0	+	133083045	133105713	789624	3	1645,96,204,	0,1881,23925,
#Duplicated in new
chr12	133106816	133130473	chr12:133106816-133130473	3	-	133120283	133121918	789624	2	15208,247,	0,23410,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr12	133115691	133122340	chr12:133115691-133122340	3	+	133115691	133115691	8553170	2	42,350,	0,6299,
#Deleted in new
chr12	133125478	133125952	chr12:133125478-133125952	7	+	133125478	133125478	16724991	1	474,	0,
#Partially deleted in new
chr12	133130574	133151123	chr12:133130574-133151123	0	+	133144492	133151123	789624	4	180,178,92,96,	0,262,13859,20453,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	133130587	133151135	chr12:133130587-133151135	0	+	133144492	133151135	789624	5	167,178,103,92,108,	0,249,12932,13846,20440,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	133130591	133159465	chr12:133130591-133159465	3	+	133144492	133156968	789624	5	163,92,127,96,3963,	0,13842,20436,21217,24911,
#Partially deleted in new
chr12	133130610	133151154	chr12:133130610-133151154	0	+	133130610	133130610	8553170	2	404,127,	0,20417,
#Partially deleted in new
chr12	133130610	133151866	chr12:133130610-133151866	0	+	133144492	133151866	789624	5	144,51,92,127,58,	0,8588,13823,20417,21198,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	133130610	133151141	chr12:133130610-133151141	0	+	133130610	133130610	8553170	5	144,178,103,92,73,	0,226,12909,13823,20458,
#Partially deleted in new
chr12	133130626	133156968	chr12:133130626-133156968	1	+	133144492	133156968	789624	5	388,92,127,96,1466,	0,13807,20401,21182,24876,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr12	133143868	133156991	chr12:133143868-133156991	1	+	133144492	133156968	789624	5	657,127,96,187,900,	0,7159,7940,11634,12223,
#Partially deleted in new
chr12	133150986	133155949	chr12:133150986-133155949	0	+	133150986	133150986	8553170	3	168,96,447,	0,822,4516,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr12	133181408	133214831	chr12:133181408-133214831	3	+	133181997	133204530	0	6	278,85,201,127,96,12688,	0,537,6463,10080,10499,20735,
#Partially deleted in new
chr12	133181473	133205023	chr12:133181473-133205023	1	+	133181997	133204530	0	6	154,85,201,127,96,2880,	0,472,6398,10015,10434,20670,
#Partially deleted in new
chr12	133181494	133188153	chr12:133181494-133188153	0	+	133181494	133181494	8553170	3	192,85,282,	0,451,6377,
#Partially deleted in new
chr12	133181494	133202350	chr12:133181494-133202350	1	+	133181997	133202317	789624	5	192,85,201,96,207,	0,451,6377,10413,20649,
#Partially deleted in new
chr12	133181502	133202219	chr12:133181502-133202219	0	+	133191503	133202219	789624	6	125,85,208,127,96,76,	0,443,6362,9986,10405,20641,
#Partially deleted in new
chr12	133181510	133202440	chr12:133181510-133202440	1	+	133181997	133202317	0	4	176,85,201,297,	0,435,6361,20633,
#Partially deleted in new
chr12	133181510	133202647	chr12:133181510-133202647	1	+	133181997	133202317	789624	4	176,85,96,504,	0,435,10397,20633,
#Partially deleted in new
chr12	133181513	133205121	chr12:133181513-133205121	1	+	133181997	133202317	789624	3	173,85,2978,	0,432,20630,
#Partially deleted in new
chr12	133181527	133191608	chr12:133181527-133191608	0	+	133191503	133191608	789624	4	159,85,208,120,	0,418,6337,9961,
#Partially deleted in new
chr12	133191454	133202169	chr12:133191454-133202169	0	+	133191454	133191454	8553170	2	549,26,	0,10689,
#Deleted in new
chr12	133217209	133217675	chr12:133217209-133217675	7	-	133217209	133217209	16724991	1	466,	0,
#Partially deleted in new
chr12	133218311	133235836	chr12:133218311-133235836	1	-	133218884	133234356	789624	9	660,85,129,121,217,124,128,271,30,	0,971,2893,8006,8624,9512,13205,15796,17495,
#Partially deleted in new
chr12	133218311	133236095	chr12:133218311-133236095	3	-	133218884	133234356	789624	8	660,85,129,121,217,124,128,1988,	0,971,2893,8006,8624,9512,13205,15796,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	133238334	133238438	chr12:133238334-133238438	3	-	133238334	133238334	8553170	1	104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr12	133238454	133238549	chr12:133238454-133238549	3	+	133238454	133238454	8553170	1	95,	0,
#Deleted in new
chr12_GL383550v2_alt	4205	4864	chr12_GL383550v2_alt:4205-4864	3	-	4205	4205	789624	3	113,114,221,	0,229,438,
#Deleted in new
chr12_GL383550v2_alt	117153	118120	chr12_GL383550v2_alt:117153-118120	7	+	117153	117153	16724991	1	967,	0,
#Deleted in new
chr12_GL383550v2_alt	123637	123950	chr12_GL383550v2_alt:123637-123950	3	+	123637	123637	8553170	1	313,	0,
#Deleted in new
chr12_GL383550v2_alt	133515	134857	chr12_GL383550v2_alt:133515-134857	7	-	133515	133515	16724991	2	93,540,	0,802,
#Deleted in new
chr12_GL383550v2_alt	144645	160338	chr12_GL383550v2_alt:144645-160338	3	-	145024	160213	789624	6	583,84,138,82,46,312,	0,3580,5374,10193,11596,15381,
#Deleted in new
chr12_GL383550v2_alt	144974	152174	chr12_GL383550v2_alt:144974-152174	0	-	144974	144974	8553170	4	254,84,134,92,	0,3251,5045,7108,
#Deleted in new
chr12_GL383550v2_alt	145024	160119	chr12_GL383550v2_alt:145024-160119	0	-	150137	160119	789624	4	204,84,138,93,	0,3201,4995,15002,
#Deleted in new
chr12_GL383550v2_alt	150030	160374	chr12_GL383550v2_alt:150030-160374	0	-	150030	150030	8553170	3	127,82,348,	0,4808,9996,
#Deleted in new
chr12_GL383550v2_alt	165739	166445	chr12_GL383550v2_alt:165739-166445	0	+	165739	165739	789624	2	337,84,	0,622,
#Deleted in new
chr12_GL383550v2_alt	165835	166076	chr12_GL383550v2_alt:165835-166076	0	+	165835	165835	8553170	1	241,	0,
#Deleted in new
chr12_GL383550v2_alt	165851	166841	chr12_GL383550v2_alt:165851-166841	3	+	165851	165851	8553170	2	225,480,	0,510,
#Deleted in new
chr12_GL383550v2_alt	165855	166445	chr12_GL383550v2_alt:165855-166445	0	+	165855	165855	8553170	1	590,	0,
#Deleted in new
chr12_GL383551v1_alt	136878	137741	chr12_GL383551v1_alt:136878-137741	3	+	136878	136878	8553170	2	104,671,	0,192,
#Deleted in new
chr12_GL383551v1_alt	138146	139910	chr12_GL383551v1_alt:138146-139910	3	+	138146	138146	8553170	2	345,965,	0,799,
#Deleted in new
chr12_GL383551v1_alt	179636	184319	chr12_GL383551v1_alt:179636-184319	3	-	179636	179636	8553170	2	904,16,	0,4667,
#Deleted in new
chr12_GL383552v1_alt	97953	98679	chr12_GL383552v1_alt:97953-98679	7	+	97953	97953	16724991	1	726,	0,
#Deleted in new
chr12_GL383552v1_alt	130764	131969	chr12_GL383552v1_alt:130764-131969	7	-	130764	130764	16724991	1	1205,	0,
#Deleted in new
chr12_GL383552v1_alt	133790	133893	chr12_GL383552v1_alt:133790-133893	3	+	133790	133790	8553170	1	103,	0,
#Deleted in new
chr12_GL383553v2_alt	29419	30155	chr12_GL383553v2_alt:29419-30155	7	+	29419	29419	16724991	1	736,	0,
#Deleted in new
chr12_GL383553v2_alt	48084	102804	chr12_GL383553v2_alt:48084-102804	3	+	48447	101017	789624	15	714,66,52,68,155,141,130,89,113,68,87,206,104,80,1910,	0,5646,7996,15049,16432,19603,22696,25989,27296,30115,42029,43512,48134,51883,52810,
#Deleted in new
chr12_GL383553v2_alt	58918	59025	chr12_GL383553v2_alt:58918-59025	3	+	58918	58918	8553170	1	107,	0,
#Deleted in new
chr12_GL383553v2_alt	135831	152874	chr12_GL383553v2_alt:135831-152874	3	-	137402	152874	789624	5	781,196,106,120,112,	0,1567,8016,11843,16931,
#Deleted in new
chr12_GL383553v2_alt	135845	152874	chr12_GL383553v2_alt:135845-152874	0	-	137402	152874	789624	5	767,196,106,120,112,	0,1553,8002,11829,16917,
#Deleted in new
chr12_GL383553v2_alt	136185	152874	chr12_GL383553v2_alt:136185-152874	0	-	137402	152874	789624	5	427,196,106,120,112,	0,1213,7662,11489,16577,
#Deleted in new
chr12_GL877875v1_alt	2309	3501	chr12_GL877875v1_alt:2309-3501	7	+	2309	2309	16724991	4	49,85,100,132,	0,430,792,1060,
#Deleted in new
chr12_GL877875v1_alt	4521	22015	chr12_GL877875v1_alt:4521-22015	7	-	4521	4521	16724991	11	423,69,153,159,202,136,137,147,99,154,138,	0,563,1391,2200,2447,2826,3201,3515,3851,12279,17356,
#Deleted in new
chr12_GL877875v1_alt	26666	28073	chr12_GL877875v1_alt:26666-28073	3	-	26666	26666	789624	3	562,203,299,	0,664,1108,
#Deleted in new
chr12_GL877875v1_alt	60779	165176	chr12_GL877875v1_alt:60779-165176	0	+	60897	165176	789624	13	672,69,280,1088,162,123,167,140,126,100,162,93,50,	0,32381,58868,71502,74359,90260,90763,95161,96729,98669,98964,102248,104347,
#Deleted in new
chr12_GL877875v1_alt	60779	63513	chr12_GL877875v1_alt:60779-63513	3	+	60897	61455	789624	1	2734,	0,
#Deleted in new
chr12_GL877875v1_alt	71390	165345	chr12_GL877875v1_alt:71390-165345	3	+	132287	165336	789624	13	337,69,1088,162,123,167,140,126,100,162,93,50,84,	0,21770,60891,63748,79649,80152,84550,86118,88058,88353,91637,93736,93871,
#Deleted in new
chr12_GL877875v1_alt	100538	105865	chr12_GL877875v1_alt:100538-105865	3	-	100538	100538	8553170	2	354,232,	0,5095,
#Deleted in new
chr12_GL877875v1_alt	131425	143184	chr12_GL877875v1_alt:131425-143184	0	-	131425	131425	789624	10	217,153,94,131,156,333,1300,171,261,91,	0,889,1140,2829,3237,3501,3923,5828,6898,11668,
#Deleted in new
chr12_GL877875v1_alt	133548	143130	chr12_GL877875v1_alt:133548-143130	3	-	133548	133548	8553170	7	312,131,156,333,1292,1331,1358,	0,706,1114,1378,1800,3705,8224,
#Deleted in new
chr12_GL877875v1_alt	158678	160336	chr12_GL877875v1_alt:158678-160336	3	-	158678	158678	8553170	2	91,1010,	0,648,
#Deleted in new
chr12_GL877875v1_alt	160870	161722	chr12_GL877875v1_alt:160870-161722	3	-	160870	160870	8553170	2	646,88,	0,764,
#Deleted in new
chr12_GL877875v1_alt	161016	161722	chr12_GL877875v1_alt:161016-161722	0	-	161016	161016	8553170	1	706,	0,
#Deleted in new
chr12_GL877875v1_alt	162992	165481	chr12_GL877875v1_alt:162992-165481	0	+	162992	162992	8553170	3	128,50,220,	0,2134,2269,
#Deleted in new
chr12_GL877875v1_alt	163069	165176	chr12_GL877875v1_alt:163069-165176	0	+	163069	163069	8553170	2	51,50,	0,2057,
#Deleted in new
chr12_GL877876v1_alt	237	1333	chr12_GL877876v1_alt:237-1333	3	-	319	1276	789624	1	1096,	0,
#Deleted in new
chr12_GL877876v1_alt	4756	5999	chr12_GL877876v1_alt:4756-5999	3	-	4756	5686	789624	1	1243,	0,
#Deleted in new
chr12_GL877876v1_alt	7842	8874	chr12_GL877876v1_alt:7842-8874	3	-	7842	8781	789624	1	1032,	0,
#Deleted in new
chr12_GL877876v1_alt	23665	81363	chr12_GL877876v1_alt:23665-81363	0	-	23665	23665	8553170	3	234,272,106,	0,57257,57592,
#Deleted in new
chr12_GL877876v1_alt	24022	25064	chr12_GL877876v1_alt:24022-25064	3	-	24051	24975	789624	1	1042,	0,
#Deleted in new
chr12_GL877876v1_alt	29779	30722	chr12_GL877876v1_alt:29779-30722	7	-	29779	29779	16724991	1	943,	0,
#Deleted in new
chr12_GL877876v1_alt	44554	47640	chr12_GL877876v1_alt:44554-47640	0	-	44554	44554	8553170	3	102,91,563,	0,1196,2523,
#Deleted in new
chr12_GL877876v1_alt	44554	402267	chr12_GL877876v1_alt:44554-402267	0	-	44554	44554	8553170	6	102,323,36,67,169,192,	0,1196,2523,127806,201171,357521,
#Deleted in new
chr12_GL877876v1_alt	44554	48181	chr12_GL877876v1_alt:44554-48181	1	-	45768	48143	789624	4	102,323,36,102,	0,1196,2523,3525,
#Deleted in new
chr12_GL877876v1_alt	44554	402252	chr12_GL877876v1_alt:44554-402252	0	-	44554	44554	789624	11	102,323,36,272,147,36,122,67,104,169,177,	0,1196,2523,36368,36703,37212,38305,127806,188933,201171,357521,
#Deleted in new
chr12_GL877876v1_alt	44554	48176	chr12_GL877876v1_alt:44554-48176	1	-	44649	48143	789624	4	102,91,36,97,	0,1196,2523,3525,
#Deleted in new
chr12_GL877876v1_alt	44556	48181	chr12_GL877876v1_alt:44556-48181	1	-	45763	48143	789624	4	100,150,36,102,	0,1194,2521,3523,
#Deleted in new
chr12_GL877876v1_alt	44589	47681	chr12_GL877876v1_alt:44589-47681	2	-	44589	44589	8553170	3	67,323,604,	0,1161,2488,
#Deleted in new
chr12_GL877876v1_alt	45697	48167	chr12_GL877876v1_alt:45697-48167	0	-	45697	45697	8553170	3	376,36,88,	0,1380,2382,
#Deleted in new
chr12_GL877876v1_alt	45911	47265	chr12_GL877876v1_alt:45911-47265	0	-	45911	45911	8553170	3	162,36,38,	0,1166,1316,
#Deleted in new
chr12_GL877876v1_alt	47070	48181	chr12_GL877876v1_alt:47070-48181	0	-	47070	47070	8553170	2	730,102,	0,1009,
#Deleted in new
chr12_GL877876v1_alt	79673	81804	chr12_GL877876v1_alt:79673-81804	0	-	79673	79673	8553170	4	89,272,147,38,	0,1249,1584,2093,
#Deleted in new
chr12_GL877876v1_alt	79716	82961	chr12_GL877876v1_alt:79716-82961	1	-	80940	82923	789624	5	46,255,164,36,102,	0,1206,1524,2050,3143,
#Deleted in new
chr12_GL877876v1_alt	80927	245896	chr12_GL877876v1_alt:80927-245896	0	-	80927	80927	8553170	5	267,147,122,67,171,	0,330,1932,91433,164798,
#Deleted in new
chr12_GL877876v1_alt	80941	82923	chr12_GL877876v1_alt:80941-82923	0	-	80941	80941	8553170	3	463,36,64,	0,825,1918,
#Deleted in new
chr12_GL877876v1_alt	81292	402198	chr12_GL877876v1_alt:81292-402198	0	-	81292	81292	8553170	5	112,36,67,169,123,	0,474,91068,164433,320783,
#Deleted in new
chr12_GL877876v1_alt	90166	245747	chr12_GL877876v1_alt:90166-245747	0	-	90166	90166	8553170	3	465,67,22,	0,82194,155559,
#Deleted in new
chr12_GL877876v1_alt	93648	94588	chr12_GL877876v1_alt:93648-94588	7	-	93648	93648	16724991	1	940,	0,
#Deleted in new
chr12_GL877876v1_alt	93806	172412	chr12_GL877876v1_alt:93806-172412	0	-	93806	93806	8553170	2	229,52,	0,78554,
#Deleted in new
chr12_GL877876v1_alt	93873	95658	chr12_GL877876v1_alt:93873-95658	0	-	93873	93873	8553170	2	162,135,	0,1650,
#Deleted in new
chr12_GL877876v1_alt	106631	108268	chr12_GL877876v1_alt:106631-108268	3	-	107092	108004	789624	1	1637,	0,
#Deleted in new
chr12_GL877876v1_alt	127941	131047	chr12_GL877876v1_alt:127941-131047	3	+	127979	129768	789624	4	102,36,419,116,	0,1033,1426,2990,
#Deleted in new
chr12_GL877876v1_alt	127941	129870	chr12_GL877876v1_alt:127941-129870	1	+	127979	129768	789624	3	102,36,503,	0,1033,1426,
#Deleted in new
chr12_GL877876v1_alt	136111	137969	chr12_GL877876v1_alt:136111-137969	3	-	136959	137913	789624	1	1858,	0,
#Deleted in new
chr12_GL877876v1_alt	136113	402227	chr12_GL877876v1_alt:136113-402227	0	-	136113	136113	8553170	5	1170,67,104,169,152,	0,36247,97374,109612,265962,
#Deleted in new
chr12_GL877876v1_alt	163130	164058	chr12_GL877876v1_alt:163130-164058	7	-	163130	163130	16724991	1	928,	0,
#Deleted in new
chr12_GL877876v1_alt	171989	245820	chr12_GL877876v1_alt:171989-245820	0	-	171989	171989	8553170	2	438,95,	0,73736,
#Deleted in new
chr12_GL877876v1_alt	184618	185618	chr12_GL877876v1_alt:184618-185618	3	-	184666	185566	789624	1	1000,	0,
#Deleted in new
chr12_GL877876v1_alt	195200	196581	chr12_GL877876v1_alt:195200-196581	3	-	195651	196581	789624	1	1381,	0,
#Deleted in new
chr12_GL877876v1_alt	204639	245843	chr12_GL877876v1_alt:204639-245843	0	-	204639	204639	8553170	2	336,118,	0,41086,
#Deleted in new
chr12_GL877876v1_alt	220324	221326	chr12_GL877876v1_alt:220324-221326	3	-	220377	221277	789624	1	1002,	0,
#Deleted in new
chr12_GL877876v1_alt	229092	230113	chr12_GL877876v1_alt:229092-230113	3	-	229111	230041	789624	1	1021,	0,
#Deleted in new
chr12_GL877876v1_alt	245718	402262	chr12_GL877876v1_alt:245718-402262	0	-	245718	245718	8553170	3	176,171,187,	0,105953,156357,
#Deleted in new
chr12_GL877876v1_alt	247037	247962	chr12_GL877876v1_alt:247037-247962	7	-	247037	247037	16724991	1	925,	0,
#Deleted in new
chr12_GL877876v1_alt	260070	261000	chr12_GL877876v1_alt:260070-261000	3	-	260070	261000	789624	1	930,	0,
#Deleted in new
chr12_GL877876v1_alt	275474	277877	chr12_GL877876v1_alt:275474-277877	7	-	275474	275474	16724991	1	2403,	0,
#Deleted in new
chr12_GL877876v1_alt	276021	276948	chr12_GL877876v1_alt:276021-276948	5	-	276021	276021	16724991	1	927,	0,
#Deleted in new
chr12_GL877876v1_alt	290013	291040	chr12_GL877876v1_alt:290013-291040	3	-	290026	290956	789624	1	1027,	0,
#Deleted in new
chr12_GL877876v1_alt	295901	295997	chr12_GL877876v1_alt:295901-295997	7	-	295901	295901	16724991	1	96,	0,
#Deleted in new
chr12_GL877876v1_alt	314059	314980	chr12_GL877876v1_alt:314059-314980	7	-	314059	314059	16724991	1	921,	0,
#Deleted in new
chr12_GL877876v1_alt	327494	328424	chr12_GL877876v1_alt:327494-328424	7	-	327494	327494	16724991	1	930,	0,
#Deleted in new
chr12_GL877876v1_alt	351497	402114	chr12_GL877876v1_alt:351497-402114	0	-	351497	351497	8553170	2	345,39,	0,50578,
#Deleted in new
chr12_GL877876v1_alt	363611	365298	chr12_GL877876v1_alt:363611-365298	3	-	363938	364898	789624	1	1687,	0,
#Deleted in new
chr12_GL877876v1_alt	389438	390348	chr12_GL877876v1_alt:389438-390348	7	-	389438	389438	16724991	1	910,	0,
#Deleted in new
chr12_GL877876v1_alt	396743	402007	chr12_GL877876v1_alt:396743-402007	3	-	396743	396743	8553170	2	298,87,	0,5177,
#Deleted in new
chr12_GL877876v1_alt	402017	402219	chr12_GL877876v1_alt:402017-402219	7	+	402017	402017	16724991	1	202,	0,
#Deleted in new
chr12_KI270833v1_alt	14811	49543	chr12_KI270833v1_alt:14811-49543	3	+	19516	48526	0	21	260,90,112,126,215,122,81,198,112,127,118,115,188,73,201,104,71,154,126,148,1134,	0,4693,5103,7866,8483,9054,10216,11352,11969,16650,17001,17666,19031,19594,23293,23611,24879,25104,29249,33292,33598,
#Deleted in new
chr12_KI270833v1_alt	15030	48308	chr12_KI270833v1_alt:15030-48308	1	+	19516	48272	0	20	41,90,112,126,215,122,81,198,112,127,118,115,188,73,201,104,71,154,126,205,	0,4474,4884,7647,8264,8835,9997,11133,11750,16431,16782,17447,18812,19375,23074,23392,24660,24885,29030,33073,
#Deleted in new
chr12_KI270833v1_alt	15032	23473	chr12_KI270833v1_alt:15032-23473	0	+	19516	23473	789624	5	64,90,112,126,179,	0,4472,4882,7645,8262,
#Deleted in new
chr12_KI270833v1_alt	15060	23345	chr12_KI270833v1_alt:15060-23345	0	+	19516	23345	789624	5	88,90,112,126,51,	0,4444,4854,7617,8234,
#Deleted in new
chr12_KI270833v1_alt	16386	23429	chr12_KI270833v1_alt:16386-23429	0	+	19516	23429	789624	5	82,90,112,126,135,	0,3118,3528,6291,6908,
#Deleted in new
chr12_KI270833v1_alt	16423	23330	chr12_KI270833v1_alt:16423-23330	0	+	19516	23330	789624	5	202,90,112,126,36,	0,3081,3491,6254,6871,
#Deleted in new
chr12_KI270833v1_alt	19155	23496	chr12_KI270833v1_alt:19155-23496	0	+	19516	23496	789624	4	439,112,126,202,	0,759,3522,4139,
#Deleted in new
chr12_KI270833v1_alt	22230	26223	chr12_KI270833v1_alt:22230-26223	0	+	22230	22230	8553170	5	573,215,122,81,60,	0,1064,1635,2797,3933,
#Deleted in new
chr12_KI270833v1_alt	27920	28632	chr12_KI270833v1_alt:27920-28632	3	-	27920	27920	8553170	1	712,	0,
#Deleted in new
chr12_KI270833v1_alt	43364	48311	chr12_KI270833v1_alt:43364-48311	0	+	43364	43364	8553170	3	211,126,208,	0,696,4739,
#Deleted in new
chr12_KI270833v1_alt	60577	61104	chr12_KI270833v1_alt:60577-61104	3	+	60577	60577	8553170	1	527,	0,
#Deleted in new
chr12_KI270834v1_alt	178	109258	chr12_KI270834v1_alt:178-109258	3	+	178	109025	789624	55	212,154,234,123,234,224,270,184,135,153,189,147,192,119,159,136,123,135,217,120,146,153,261,173,94,168,189,172,204,81,198,162,175,182,137,218,222,148,280,230,274,105,155,155,184,201,210,96,172,132,212,168,181,146,380,	0,3859,6427,8719,11769,14635,18913,19284,21274,22043,24201,26519,30369,32463,34325,37908,39264,40780,41216,43679,44770,46871,48544,51049,52577,52947,54938,60455,66546,67956,71083,71966,76252,82574,83849,86474,87705,88228,89833,90960,92052,97128,97643,98415,100002,101752,102640,103029,103767,104706,105001,105306,106696,107986,108700,
#Deleted in new
chr12_KI270834v1_alt	8930	55729	chr12_KI270834v1_alt:8930-55729	0	+	8930	34498	789624	21	90,234,224,270,184,135,153,189,147,192,119,174,136,123,135,217,120,173,94,168,613,	0,3017,5883,10161,10532,12522,13291,15449,17767,21617,23711,25558,29156,30512,32028,32464,34927,42297,43825,44195,46186,
#Deleted in new
chr12_KI270834v1_alt	81804	88105	chr12_KI270834v1_alt:81804-88105	0	+	81848	88105	789624	5	244,182,137,218,222,	0,948,2223,4848,6079,
#Deleted in new
chr12_KI270834v1_alt	92214	117039	chr12_KI270834v1_alt:92214-117039	0	-	92214	92214	8553170	3	363,42,149,	0,24073,24676,
#Deleted in new
chr12_KI270834v1_alt	96465	117913	chr12_KI270834v1_alt:96465-117913	0	-	96465	96465	8553170	4	1367,42,147,98,	0,19822,20425,21350,
#Deleted in new
chr12_KI270834v1_alt	98678	109257	chr12_KI270834v1_alt:98678-109257	0	+	98678	98678	8553170	11	70,184,201,210,910,132,212,168,181,146,379,	0,1502,3252,4140,4529,6206,6501,6806,8196,9486,10200,
#Deleted in new
chr12_KI270834v1_alt	100309	103283	chr12_KI270834v1_alt:100309-103283	0	+	100309	100309	8553170	3	55,201,465,	0,1621,2509,
#Deleted in new
chr12_KI270834v1_alt	100598	108528	chr12_KI270834v1_alt:100598-108528	3	-	100598	100598	8553170	2	3489,920,	0,7010,
#Deleted in new
chr12_KI270834v1_alt	105334	106983	chr12_KI270834v1_alt:105334-106983	0	+	105334	106191	789624	4	57,168,114,109,	0,150,827,1540,
#Deleted in new
chr12_KI270834v1_alt	109165	117908	chr12_KI270834v1_alt:109165-117908	1	-	110601	117849	789624	4	2209,42,147,93,	0,7122,7725,8650,
#Deleted in new
chr12_KI270834v1_alt	109960	119498	chr12_KI270834v1_alt:109960-119498	3	-	110601	117020	789624	3	1414,42,2608,	0,6327,6930,
#Deleted in new
chr12_KI270834v1_alt	109979	117037	chr12_KI270834v1_alt:109979-117037	1	-	110601	117020	789624	3	1395,42,147,	0,6308,6911,
#Deleted in new
chr12_KI270834v1_alt	111231	119344	chr12_KI270834v1_alt:111231-119344	0	-	111231	117849	789624	6	143,42,147,93,72,97,	0,5056,5659,6584,6981,8016,
#Deleted in new
chr12_KI270834v1_alt	111257	117037	chr12_KI270834v1_alt:111257-117037	0	-	111257	117020	789624	3	117,42,147,	0,5030,5633,
#Deleted in new
chr12_KI270834v1_alt	111308	117908	chr12_KI270834v1_alt:111308-117908	0	-	111308	117849	789624	4	66,42,147,93,	0,4979,5582,6507,
#Deleted in new
chr12_KI270834v1_alt	117019	117908	chr12_KI270834v1_alt:117019-117908	0	-	117019	117849	789624	2	18,93,	0,796,
#Deleted in new
chr12_KI270835v1_alt	172	6000	chr12_KI270835v1_alt:172-6000	0	-	172	172	8553170	8	158,177,103,69,91,501,113,52,	0,460,1329,2744,3185,3551,4707,5776,
#Deleted in new
chr12_KI270835v1_alt	177	96948	chr12_KI270835v1_alt:177-96948	3	-	301	96948	789624	33	153,103,69,91,113,179,246,166,75,157,82,174,84,52,119,130,229,93,149,171,150,196,242,159,110,121,118,85,169,68,157,184,32,	0,1324,2739,3180,4702,5389,15951,16961,18265,20333,21122,21965,22859,23731,24493,26194,26568,27235,28731,29687,35521,36026,38497,39431,39931,40789,44949,48602,49502,69419,91039,91668,96739,
#Deleted in new
chr12_KI270835v1_alt	177	4983	chr12_KI270835v1_alt:177-4983	0	-	177	177	8553170	5	153,103,69,91,104,	0,1324,2739,3180,4702,
#Deleted in new
chr12_KI270835v1_alt	179	6000	chr12_KI270835v1_alt:179-6000	0	-	179	179	8553170	6	630,103,69,91,113,52,	0,1322,2737,3178,4700,5769,
#Deleted in new
chr12_KI270835v1_alt	135233	135479	chr12_KI270835v1_alt:135233-135479	7	+	135233	135233	16724991	1	246,	0,
#Deleted in new
chr12_KI270835v1_alt	142785	143391	chr12_KI270835v1_alt:142785-143391	7	-	142785	142785	16724991	1	606,	0,
#Deleted in new
chr12_KI270835v1_alt	145154	145239	chr12_KI270835v1_alt:145154-145239	7	-	145154	145154	16724991	1	85,	0,
#Deleted in new
chr12_KI270835v1_alt	171377	217166	chr12_KI270835v1_alt:171377-217166	3	-	173505	188998	789624	6	2288,151,127,100,148,349,	0,7050,13221,14650,17493,45440,
#Deleted in new
chr12_KI270835v1_alt	171377	216910	chr12_KI270835v1_alt:171377-216910	1	-	173505	178489	789624	3	2288,151,93,	0,7050,45440,
#Deleted in new
chr12_KI270835v1_alt	171377	189315	chr12_KI270835v1_alt:171377-189315	0	-	171377	171377	8553170	5	2288,151,127,100,445,	0,7050,13221,14650,17493,
#Deleted in new
chr12_KI270835v1_alt	172855	214956	chr12_KI270835v1_alt:172855-214956	1	-	173505	188998	789624	6	810,151,127,100,148,219,	0,5572,11743,13172,16015,41882,
#Deleted in new
chr12_KI270835v1_alt	173432	188969	chr12_KI270835v1_alt:173432-188969	0	-	187759	188969	789624	6	233,151,127,100,135,99,	0,4995,11166,12595,14271,15438,
#Deleted in new
chr12_KI270835v1_alt	173481	216993	chr12_KI270835v1_alt:173481-216993	1	-	173505	178489	789624	5	184,151,127,100,176,	0,4946,11117,12546,43336,
#Deleted in new
chr12_KI270835v1_alt	178530	217852	chr12_KI270835v1_alt:178530-217852	0	-	178530	188998	789624	5	48,127,100,148,36,	0,6068,7497,10340,39286,
#Deleted in new
chr12_KI270835v1_alt	178553	216288	chr12_KI270835v1_alt:178553-216288	0	-	178553	188998	789624	5	25,127,100,148,269,	0,6045,7474,10317,37466,
#Deleted in new
chr12_KI270835v1_alt	194288	216922	chr12_KI270835v1_alt:194288-216922	0	-	194288	194288	8553170	2	1629,105,	0,22529,
#Deleted in new
chr12_KI270835v1_alt	202410	202823	chr12_KI270835v1_alt:202410-202823	7	+	202410	202410	16724991	2	213,103,	0,310,
#Deleted in new
chr12_KI270835v1_alt	215109	216623	chr12_KI270835v1_alt:215109-216623	3	+	215109	215109	789624	1	1514,	0,
#Deleted in new
chr12_KI270837v1_alt	20912	25491	chr12_KI270837v1_alt:20912-25491	1	+	20949	24207	789624	6	101,36,369,249,317,107,	0,1036,2021,2576,3011,4472,
#Deleted in new
chr12_KI270837v1_alt	20912	25491	chr12_KI270837v1_alt:20912-25491	1	+	20949	24207	789624	4	101,36,1676,107,	0,1036,1652,4472,
#Deleted in new
chr12_KI270837v1_alt	20914	25493	chr12_KI270837v1_alt:20914-25493	3	+	20949	24207	789624	5	99,36,126,1058,109,	0,1034,1587,2268,4470,
#Deleted in new
chr12_KI270837v1_alt	20916	25491	chr12_KI270837v1_alt:20916-25491	1	+	20949	24207	789624	5	97,36,213,257,107,	0,1032,1648,3067,4468,
#Deleted in new
chr12_KI270837v1_alt	20924	25491	chr12_KI270837v1_alt:20924-25491	1	+	20949	24207	789624	5	89,36,213,317,107,	0,1024,1640,2999,4460,
#Deleted in new
chr12_KI270904v1_alt	237	1333	chr12_KI270904v1_alt:237-1333	3	-	319	1276	789624	1	1096,	0,
#Deleted in new
chr12_KI270904v1_alt	4756	5999	chr12_KI270904v1_alt:4756-5999	3	-	4756	5686	789624	1	1243,	0,
#Deleted in new
chr12_KI270904v1_alt	7842	8874	chr12_KI270904v1_alt:7842-8874	3	-	7842	8781	789624	1	1032,	0,
#Deleted in new
chr12_KI270904v1_alt	23665	81363	chr12_KI270904v1_alt:23665-81363	0	-	80940	81363	789624	2	234,441,	0,57257,
#Deleted in new
chr12_KI270904v1_alt	24022	25064	chr12_KI270904v1_alt:24022-25064	3	-	24051	24975	789624	1	1042,	0,
#Deleted in new
chr12_KI270904v1_alt	29779	30722	chr12_KI270904v1_alt:29779-30722	7	-	29779	29779	16724991	1	943,	0,
#Deleted in new
chr12_KI270904v1_alt	44554	48181	chr12_KI270904v1_alt:44554-48181	1	-	45768	48143	789624	4	102,323,36,102,	0,1196,2523,3525,
#Deleted in new
chr12_KI270904v1_alt	44554	366553	chr12_KI270904v1_alt:44554-366553	3	-	45768	246051	789624	6	102,323,36,67,169,192,	0,1196,2523,127806,201461,321807,
#Deleted in new
chr12_KI270904v1_alt	44554	48176	chr12_KI270904v1_alt:44554-48176	1	-	44649	48143	789624	4	102,91,36,97,	0,1196,2523,3525,
#Deleted in new
chr12_KI270904v1_alt	44554	366538	chr12_KI270904v1_alt:44554-366538	3	-	80940	246020	789624	10	102,323,36,482,36,122,67,104,169,177,	0,1196,2523,36368,37212,38305,127806,189225,201461,321807,
#Deleted in new
chr12_KI270904v1_alt	44554	47640	chr12_KI270904v1_alt:44554-47640	0	-	44554	44554	8553170	3	102,91,563,	0,1196,2523,
#Deleted in new
chr12_KI270904v1_alt	44556	48181	chr12_KI270904v1_alt:44556-48181	1	-	45763	48143	789624	4	100,150,36,102,	0,1194,2521,3523,
#Deleted in new
chr12_KI270904v1_alt	44589	47681	chr12_KI270904v1_alt:44589-47681	0	-	44589	44589	8553170	3	67,323,604,	0,1161,2488,
#Deleted in new
chr12_KI270904v1_alt	45697	48167	chr12_KI270904v1_alt:45697-48167	0	-	45697	45697	8553170	3	376,36,88,	0,1380,2382,
#Deleted in new
chr12_KI270904v1_alt	45911	47265	chr12_KI270904v1_alt:45911-47265	0	-	45911	45911	8553170	3	162,36,38,	0,1166,1316,
#Deleted in new
chr12_KI270904v1_alt	47070	48181	chr12_KI270904v1_alt:47070-48181	0	-	47070	47070	8553170	2	730,102,	0,1009,
#Deleted in new
chr12_KI270904v1_alt	79670	82959	chr12_KI270904v1_alt:79670-82959	1	-	80940	82923	789624	4	92,482,36,100,	0,1252,2096,3189,
#Deleted in new
chr12_KI270904v1_alt	79716	82961	chr12_KI270904v1_alt:79716-82961	3	-	80940	82923	789624	5	46,255,164,36,102,	0,1206,1524,2050,3143,
#Deleted in new
chr12_KI270904v1_alt	80927	246186	chr12_KI270904v1_alt:80927-246186	3	-	80940	82923	789624	4	477,122,67,171,	0,1932,91433,165088,
#Deleted in new
chr12_KI270904v1_alt	81292	366484	chr12_KI270904v1_alt:81292-366484	0	-	81292	81292	8553170	5	112,36,67,169,123,	0,474,91068,164723,285069,
#Deleted in new
chr12_KI270904v1_alt	90166	246037	chr12_KI270904v1_alt:90166-246037	0	-	90166	90166	8553170	3	465,67,22,	0,82194,155849,
#Deleted in new
chr12_KI270904v1_alt	93648	94588	chr12_KI270904v1_alt:93648-94588	5	-	93648	93648	16724991	1	940,	0,
#Deleted in new
chr12_KI270904v1_alt	93806	172412	chr12_KI270904v1_alt:93806-172412	0	-	93806	93806	8553170	2	229,52,	0,78554,
#Deleted in new
chr12_KI270904v1_alt	93873	95658	chr12_KI270904v1_alt:93873-95658	7	-	93873	93873	16724991	2	162,135,	0,1650,
#Deleted in new
chr12_KI270904v1_alt	106631	108268	chr12_KI270904v1_alt:106631-108268	3	-	107092	108004	789624	1	1637,	0,
#Deleted in new
chr12_KI270904v1_alt	127941	129870	chr12_KI270904v1_alt:127941-129870	1	+	127979	129768	789624	3	102,36,503,	0,1033,1426,
#Deleted in new
chr12_KI270904v1_alt	127941	131047	chr12_KI270904v1_alt:127941-131047	3	+	127979	129768	789624	4	102,36,419,116,	0,1033,1426,2990,
#Deleted in new
chr12_KI270904v1_alt	136110	137969	chr12_KI270904v1_alt:136110-137969	3	-	136959	137913	789624	1	1859,	0,
#Deleted in new
chr12_KI270904v1_alt	136113	366513	chr12_KI270904v1_alt:136113-366513	0	-	136113	136113	8553170	5	1170,67,104,169,152,	0,36247,97666,109902,230248,
#Deleted in new
chr12_KI270904v1_alt	163130	164058	chr12_KI270904v1_alt:163130-164058	7	-	163130	163130	16724991	1	928,	0,
#Deleted in new
chr12_KI270904v1_alt	171989	246110	chr12_KI270904v1_alt:171989-246110	0	-	171989	171989	8553170	2	438,95,	0,74026,
#Deleted in new
chr12_KI270904v1_alt	184605	185605	chr12_KI270904v1_alt:184605-185605	3	-	184653	185553	789624	1	1000,	0,
#Deleted in new
chr12_KI270904v1_alt	195189	196570	chr12_KI270904v1_alt:195189-196570	3	-	195640	196570	789624	1	1381,	0,
#Deleted in new
chr12_KI270904v1_alt	204628	246130	chr12_KI270904v1_alt:204628-246130	0	-	204628	204628	8553170	2	336,115,	0,41387,
#Deleted in new
chr12_KI270904v1_alt	220312	221314	chr12_KI270904v1_alt:220312-221314	3	-	220365	221265	789624	1	1002,	0,
#Deleted in new
chr12_KI270904v1_alt	229391	230412	chr12_KI270904v1_alt:229391-230412	3	-	229410	230340	789624	1	1021,	0,
#Deleted in new
chr12_KI270904v1_alt	246008	366548	chr12_KI270904v1_alt:246008-366548	0	-	246008	246008	8553170	3	176,171,187,	0,70025,120353,
#Deleted in new
chr12_KI270904v1_alt	247326	248256	chr12_KI270904v1_alt:247326-248256	7	-	247326	247326	16724991	1	930,	0,
#Deleted in new
chr12_KI270904v1_alt	262228	263158	chr12_KI270904v1_alt:262228-263158	3	-	262408	263158	789624	1	930,	0,
#Deleted in new
chr12_KI270904v1_alt	278434	279357	chr12_KI270904v1_alt:278434-279357	7	-	278434	278434	16724991	1	923,	0,
#Deleted in new
chr12_KI270904v1_alt	291856	292786	chr12_KI270904v1_alt:291856-292786	3	-	291886	292786	789624	1	930,	0,
#Deleted in new
chr12_KI270904v1_alt	315859	366400	chr12_KI270904v1_alt:315859-366400	0	-	315859	315859	8553170	2	345,39,	0,50502,
#Deleted in new
chr12_KI270904v1_alt	328318	329278	chr12_KI270904v1_alt:328318-329278	3	-	328318	329278	789624	1	960,	0,
#Deleted in new
chr12_KI270904v1_alt	353750	354661	chr12_KI270904v1_alt:353750-354661	7	-	353750	353750	16724991	1	911,	0,
#Deleted in new
chr12_KI270904v1_alt	361059	366293	chr12_KI270904v1_alt:361059-366293	3	-	361059	361059	8553170	2	298,87,	0,5147,
#Deleted in new
chr12_KI270904v1_alt	366161	370955	chr12_KI270904v1_alt:366161-370955	3	+	366161	366161	8553170	1	4794,	0,
#Deleted in new
chr12_KI270904v1_alt	366296	366503	chr12_KI270904v1_alt:366296-366503	0	+	366296	366296	8553170	1	207,	0,
#Deleted in new
chr12_KI270904v1_alt	380955	381900	chr12_KI270904v1_alt:380955-381900	3	-	380955	381900	789624	1	945,	0,
#Deleted in new
chr12_KI270904v1_alt	391037	391959	chr12_KI270904v1_alt:391037-391959	7	-	391037	391037	16724991	1	922,	0,
#Deleted in new
chr12_KI270904v1_alt	407181	446352	chr12_KI270904v1_alt:407181-446352	3	+	407181	407181	8553170	2	441,71,	0,39100,
#Deleted in new
chr12_KI270904v1_alt	460886	464670	chr12_KI270904v1_alt:460886-464670	1	-	462155	464632	789624	5	106,343,504,36,102,	0,1252,1721,2709,3682,
#Deleted in new
chr12_KI270904v1_alt	460918	464768	chr12_KI270904v1_alt:460918-464768	3	-	462155	464632	789624	4	74,973,36,200,	0,1220,2677,3650,
#Deleted in new
chr12_KI270904v1_alt	460919	464670	chr12_KI270904v1_alt:460919-464670	1	-	462155	464632	789624	6	73,343,252,252,36,102,	0,1219,1625,1940,2676,3649,
#Deleted in new
chr12_KI270904v1_alt	462742	463702	chr12_KI270904v1_alt:462742-463702	0	-	462742	462742	8553170	2	369,107,	0,853,
#Deleted in new
chr12_KI270904v1_alt	502045	505398	chr12_KI270904v1_alt:502045-505398	3	-	503201	505361	789624	4	117,662,36,101,	0,1138,2287,3252,
#Deleted in new
chr12_KI270904v1_alt	503183	505395	chr12_KI270904v1_alt:503183-505395	1	-	503201	505361	789624	3	662,36,98,	0,1149,2114,
#Deleted in new
chr12_KI270904v1_alt	503189	505398	chr12_KI270904v1_alt:503189-505398	1	-	503201	505361	789624	4	215,234,36,101,	0,422,1143,2108,
#Deleted in new
chr12_KI270904v1_alt	546785	550553	chr12_KI270904v1_alt:546785-550553	1	-	548069	550516	789624	5	107,573,353,36,101,	0,1251,1827,2696,3667,
#Deleted in new
chr12_KI270904v1_alt	546785	550549	chr12_KI270904v1_alt:546785-550549	1	-	548069	550516	789624	5	107,257,213,36,97,	0,1251,1967,2696,3667,
#Deleted in new
chr12_KI270904v1_alt	546785	550554	chr12_KI270904v1_alt:546785-550554	3	-	548069	550516	789624	5	107,317,213,36,102,	0,1251,1967,2696,3667,
#Deleted in new
chr12_KN538369v1_fix	18841	68682	chr12_KN538369v1_fix:18841-68682	3	+	48303	67986	789624	7	111,52,440,174,71,267,735,	0,1952,29455,37369,40935,44820,49106,
#Deleted in new
chr12_KN538369v1_fix	18858	41334	chr12_KN538369v1_fix:18858-41334	0	+	18858	18858	8553170	5	94,52,94,194,112,	0,1935,18268,21601,22364,
#Deleted in new
chr12_KN538369v1_fix	18858	68682	chr12_KN538369v1_fix:18858-68682	1	+	37128	67986	789624	8	94,52,94,440,174,71,267,735,	0,1935,18268,29438,37352,40918,44803,49089,
#Deleted in new
chr12_KN538369v1_fix	18860	41358	chr12_KN538369v1_fix:18860-41358	0	+	18860	18860	8553170	5	92,52,94,200,136,	0,1933,18266,21075,22362,
#Deleted in new
chr12_KN538369v1_fix	18861	48476	chr12_KN538369v1_fix:18861-48476	0	+	48303	48476	789624	4	91,52,275,180,	0,1932,22361,29435,
#Deleted in new
chr12_KN538369v1_fix	18861	24782	chr12_KN538369v1_fix:18861-24782	0	+	18861	18861	8553170	3	91,52,1177,	0,1932,4744,
#Deleted in new
chr12_KN538369v1_fix	18888	48669	chr12_KN538369v1_fix:18888-48669	0	+	46974	48669	789624	4	64,52,273,373,	0,1905,27815,29408,
#Deleted in new
chr12_KN538369v1_fix	39932	40838	chr12_KN538369v1_fix:39932-40838	0	+	39932	39932	8553170	2	203,345,	0,561,
#Deleted in new
chr12_KN538369v1_fix	39936	47065	chr12_KN538369v1_fix:39936-47065	0	+	39936	39936	8553170	2	199,362,	0,6767,
#Deleted in new
chr12_KN538369v1_fix	39936	68693	chr12_KN538369v1_fix:39936-68693	1	+	48303	67986	789624	6	199,440,174,71,267,746,	0,8360,16274,19840,23725,28011,
#Deleted in new
chr12_KN538369v1_fix	40465	68693	chr12_KN538369v1_fix:40465-68693	1	+	48303	67986	789624	6	188,440,174,71,267,746,	0,7831,15745,19311,23196,27482,
#Deleted in new
chr12_KN538369v1_fix	40465	68693	chr12_KN538369v1_fix:40465-68693	1	+	48303	63589	789624	6	188,440,174,71,420,746,	0,7831,15745,19311,23043,27482,
#Deleted in new
chr12_KN538369v1_fix	48250	56307	chr12_KN538369v1_fix:48250-56307	0	+	48303	56307	789624	2	486,97,	0,7960,
#Deleted in new
chr12_KN538369v1_fix	48296	180082	chr12_KN538369v1_fix:48296-180082	0	+	48303	107953	789624	7	440,174,71,33,144,199,186,	0,7914,11480,35996,59537,108006,131600,
#Deleted in new
chr12_KN538369v1_fix	80160	80487	chr12_KN538369v1_fix:80160-80487	7	+	80160	80160	16724991	1	327,	0,
#Deleted in new
chr12_KN538369v1_fix	80949	81034	chr12_KN538369v1_fix:80949-81034	3	+	80949	80949	5263520	1	85,	0,
#Deleted in new
chr12_KN538369v1_fix	85022	235810	chr12_KN538369v1_fix:85022-235810	3	-	90123	235733	0	23	5396,98,137,231,111,237,126,210,191,212,203,327,185,227,290,217,172,397,132,197,198,394,132,	0,8540,9271,10666,14758,15796,19150,22300,31341,32917,34811,42804,43755,46168,48248,49054,63785,65018,67955,70898,87178,128237,150656,
#Deleted in new
chr12_KN538369v1_fix	85026	213302	chr12_KN538369v1_fix:85026-213302	0	-	90123	213302	789624	24	3302,34,335,98,137,231,111,237,126,210,191,212,203,327,185,227,290,217,172,397,132,197,198,43,	0,4341,5057,8536,9267,10662,14754,15792,19146,22296,31337,32913,34807,42800,43751,46164,48244,49050,63781,65014,67951,70894,87174,128233,
#Deleted in new
chr12_KN538369v1_fix	90044	100828	chr12_KN538369v1_fix:90044-100828	0	-	93571	100828	789624	4	374,98,111,10,	0,3518,9736,10774,
#Deleted in new
chr12_KN538369v1_fix	90090	235767	chr12_KN538369v1_fix:90090-235767	1	-	90123	235733	789624	23	328,98,137,231,111,102,126,210,191,212,203,327,185,227,290,217,172,397,132,197,198,394,89,	0,3472,4203,5598,9690,10728,14082,17232,26273,27849,29743,37736,38687,41100,43180,43986,58717,59950,62887,65830,82110,123169,145588,
#Deleted in new
chr12_KN538369v1_fix	94359	104226	chr12_KN538369v1_fix:94359-104226	0	-	94359	94359	8553170	4	71,111,237,54,	0,5421,6459,9813,
#Deleted in new
chr12_KN538369v1_fix	124259	124770	chr12_KN538369v1_fix:124259-124770	7	+	124259	124259	16724991	1	511,	0,
#Deleted in new
chr12_KN538369v1_fix	155803	172321	chr12_KN538369v1_fix:155803-172321	0	-	155803	155803	8553170	2	314,121,	0,16397,
#Deleted in new
chr12_KN538369v1_fix	156085	236010	chr12_KN538369v1_fix:156085-236010	0	-	156085	172394	789624	3	32,198,332,	0,16115,79593,
#Deleted in new
chr12_KN538369v1_fix	168638	169835	chr12_KN538369v1_fix:168638-169835	1	-	168638	169835	8553170	6	40,47,321,54,90,237,	0,362,411,734,790,960,
#Deleted in new
chr12_KN538369v1_fix	168638	169835	chr12_KN538369v1_fix:168638-169835	3	-	168638	169835	8553170	6	40,47,321,54,90,237,	0,362,411,734,790,960,
#Deleted in new
chr12_KN538369v1_fix	195671	195775	chr12_KN538369v1_fix:195671-195775	3	+	195671	195671	8553170	1	104,	0,
#Deleted in new
chr12_KN538369v1_fix	217988	218425	chr12_KN538369v1_fix:217988-218425	7	+	217988	217988	16724991	1	437,	0,
#Deleted in new
chr12_KN538369v1_fix	258224	258327	chr12_KN538369v1_fix:258224-258327	3	-	258224	258224	8553170	1	103,	0,
#Deleted in new
chr12_KN538369v1_fix	295053	319539	chr12_KN538369v1_fix:295053-319539	3	-	299024	312312	789624	4	4903,141,323,464,	0,12364,17036,24022,
#Deleted in new
chr12_KN538369v1_fix	298262	319239	chr12_KN538369v1_fix:298262-319239	1	-	299024	312312	789624	5	1694,141,82,139,164,	0,9155,13827,14011,20813,
#Deleted in new
chr12_KN538369v1_fix	298710	307672	chr12_KN538369v1_fix:298710-307672	1	-	299024	307538	789624	2	1246,255,	0,8707,
#Deleted in new
chr12_KN538369v1_fix	307773	308252	chr12_KN538369v1_fix:307773-308252	7	+	307773	307773	16724991	1	479,	0,
#Deleted in new
chr12_KN538369v1_fix	312140	319229	chr12_KN538369v1_fix:312140-319229	0	-	312140	312312	789624	3	272,70,154,	0,5036,6935,
#Deleted in new
chr12_KN538369v1_fix	324403	326065	chr12_KN538369v1_fix:324403-326065	3	-	324403	324403	789624	2	1400,140,	0,1522,
#Deleted in new
chr12_KN538369v1_fix	326076	434786	chr12_KN538369v1_fix:326076-434786	1	+	326115	434779	789624	4	40,144,158,238,	0,4127,78554,108472,
#Deleted in new
chr12_KN538369v1_fix	326118	438697	chr12_KN538369v1_fix:326118-438697	3	+	326449	434779	789624	4	389,144,158,4149,	0,4085,78512,108430,
#Deleted in new
chr12_KN538369v1_fix	326355	404888	chr12_KN538369v1_fix:326355-404888	0	+	326355	326355	8553170	3	152,144,258,	0,3848,78275,
#Deleted in new
chr12_KN538369v1_fix	326415	434847	chr12_KN538369v1_fix:326415-434847	1	+	326449	434779	789624	3	92,158,299,	0,78215,108133,
#Deleted in new
chr12_KN538369v1_fix	421105	421484	chr12_KN538369v1_fix:421105-421484	7	-	421105	421105	16724991	1	379,	0,
#Deleted in new
chr12_KN538369v1_fix	443212	531386	chr12_KN538369v1_fix:443212-531386	3	-	445835	490101	0	7	3806,124,160,164,139,593,267,	0,6013,12818,26309,45652,46661,87907,
#Deleted in new
chr12_KN538369v1_fix	444899	531386	chr12_KN538369v1_fix:444899-531386	1	-	456125	490101	0	6	2119,124,160,139,593,267,	0,4326,11131,43965,44974,86220,
#Deleted in new
chr12_KN538369v1_fix	446888	475190	chr12_KN538369v1_fix:446888-475190	0	-	446888	446888	8553170	4	130,160,164,100,	0,9142,22633,28202,
#Deleted in new
chr12_KN538369v1_fix	454355	460584	chr12_KN538369v1_fix:454355-460584	3	+	454355	454355	8553170	2	66,346,	0,5883,
#Deleted in new
chr12_KN538369v1_fix	490026	530128	chr12_KN538369v1_fix:490026-530128	0	-	490026	490101	789624	2	440,126,	0,39976,
#Deleted in new
chr12_KN538369v1_fix	490083	530080	chr12_KN538369v1_fix:490083-530080	0	-	490083	490101	8553170	3	383,124,78,	0,33455,39919,
#Deleted in new
chr12_KN538369v1_fix	490329	529889	chr12_KN538369v1_fix:490329-529889	0	-	490329	490329	8553170	2	137,121,	0,39439,
#Deleted in new
chr12_KN538369v1_fix	535359	535731	chr12_KN538369v1_fix:535359-535731	1	-	535359	535731	8553170	1	372,	0,
#Deleted in new
chr12_KN538369v1_fix	535359	535731	chr12_KN538369v1_fix:535359-535731	3	-	535359	535731	8553170	1	372,	0,
#Deleted in new
chr12_KN538369v1_fix	537203	537779	chr12_KN538369v1_fix:537203-537779	7	-	537203	537203	16724991	1	576,	0,
#Deleted in new
chr12_KN538370v1_fix	5571	10882	chr12_KN538370v1_fix:5571-10882	3	+	5571	5571	789624	4	226,133,164,328,	0,1244,4722,4983,
#Deleted in new
chr12_KN538370v1_fix	5614	6924	chr12_KN538370v1_fix:5614-6924	1	+	5614	5614	8553170	3	183,295,109,	0,790,1201,
#Deleted in new
chr12_KN538370v1_fix	6622	8088	chr12_KN538370v1_fix:6622-8088	1	+	6622	6622	8553170	2	326,567,	0,899,
#Deleted in new
chr12_KN538370v1_fix	10291	10824	chr12_KN538370v1_fix:10291-10824	0	+	10291	10291	8553170	2	166,270,	0,263,
#Deleted in new
chr12_KQ759760v1_fix	170778	172896	chr12_KQ759760v1_fix:170778-172896	1	+	170778	172896	8553170	2	124,83,	0,2035,
#Deleted in new
chr12_KQ759760v1_fix	170778	172896	chr12_KQ759760v1_fix:170778-172896	3	+	170778	172896	8553170	2	124,83,	0,2035,
#Deleted in new
chr12_KQ759760v1_fix	273537	274045	chr12_KQ759760v1_fix:273537-274045	3	+	273537	273537	8553170	1	508,	0,
#Deleted in new
chr12_KZ208916v1_fix	2458	2524	chr12_KZ208916v1_fix:2458-2524	3	-	2458	2458	5263520	1	66,	0,
#Deleted in new
chr12_KZ208916v1_fix	30717	115068	chr12_KZ208916v1_fix:30717-115068	0	+	30717	30717	8553170	3	144,257,83,	0,65684,84268,
#Deleted in new
chr12_KZ208916v1_fix	33170	130822	chr12_KZ208916v1_fix:33170-130822	3	+	96487	128216	0	8	165,257,120,172,187,188,194,2735,	0,63231,81815,86827,89424,89862,92853,94917,
#Deleted in new
chr12_KZ208916v1_fix	33306	73200	chr12_KZ208916v1_fix:33306-73200	0	+	33306	33306	8553170	3	51,97,332,	0,11723,39562,
#Deleted in new
chr12_KZ208916v1_fix	37973	40188	chr12_KZ208916v1_fix:37973-40188	7	-	37973	37973	16724991	2	559,1420,	0,795,
#Deleted in new
chr12_KZ208916v1_fix	83340	89243	chr12_KZ208916v1_fix:83340-89243	3	-	83340	83340	8553170	3	1907,1318,245,	0,3426,5658,
#Deleted in new
chr12_KZ208916v1_fix	99374	100155	chr12_KZ208916v1_fix:99374-100155	7	-	99374	99374	16724991	1	781,	0,
#Deleted in new
chr12_KZ208916v1_fix	102872	120059	chr12_KZ208916v1_fix:102872-120059	0	+	102872	102872	8553170	3	252,120,62,	0,12113,17125,
#Deleted in new
chr12_KZ208916v1_fix	114857	122662	chr12_KZ208916v1_fix:114857-122662	0	+	114857	114857	8553170	3	248,172,68,	0,5140,7737,
#Deleted in new
chr12_KZ208916v1_fix	115066	120751	chr12_KZ208916v1_fix:115066-120751	0	+	115066	115066	8553170	2	39,754,	0,4931,
#Deleted in new
chr12_KZ208916v1_fix	122291	123111	chr12_KZ208916v1_fix:122291-123111	0	+	122291	122291	8553170	2	490,79,	0,741,
#Deleted in new
chr12_KZ208916v1_fix	134100	260980	chr12_KZ208916v1_fix:134100-260980	3	-	135798	260617	789624	38	1803,83,113,118,21,53,53,76,71,63,45,62,81,128,96,94,98,46,68,62,72,87,75,81,78,134,79,114,90,75,151,61,132,163,60,117,82,590,	0,3342,3711,5461,7718,8043,8429,9086,9617,18321,18586,19705,48782,52445,54637,61994,64055,64227,66620,68188,82647,83294,86358,86999,87847,90910,92286,92811,93030,94008,94266,95052,115483,115918,117949,121066,122897,126290,
#Deleted in new
chr12_KZ208916v1_fix	134106	260810	chr12_KZ208916v1_fix:134106-260810	0	-	134106	134106	8553170	36	1797,83,113,118,764,76,71,63,45,62,81,128,96,94,98,46,68,62,72,87,75,81,78,134,79,114,90,75,151,61,132,163,60,117,82,420,	0,3336,3705,5455,7712,9080,9611,18315,18580,19699,48776,52439,54631,61988,64049,64221,66614,68182,82641,83288,86352,86993,87841,90904,92280,92805,93024,94002,94260,95046,115477,115912,117943,121060,122891,126284,
#Deleted in new
chr12_KZ208916v1_fix	134106	196181	chr12_KZ208916v1_fix:134106-196181	0	-	143247	196181	8553170	15	1797,83,113,118,21,53,53,76,63,45,62,81,128,96,87,	0,3336,3705,5455,7712,8037,8423,9080,18315,18580,19699,48776,52439,54631,61988,
#Deleted in new
chr12_KZ208916v1_fix	134916	260781	chr12_KZ208916v1_fix:134916-260781	0	-	217446	260617	8553170	37	987,83,113,118,21,53,53,76,71,63,45,81,128,96,94,98,46,68,62,72,87,127,81,78,134,79,114,90,75,151,61,132,163,60,117,82,391,	0,2526,2895,4645,6902,7227,7613,8270,8801,17505,17770,47966,51629,53821,61178,63239,63411,65804,67372,81831,82478,85542,86183,87031,90094,91470,91995,92214,93192,93450,94236,114667,115102,117133,120250,122081,125474,
#Deleted in new
chr12_KZ208916v1_fix	134945	153882	chr12_KZ208916v1_fix:134945-153882	0	-	143247	153853	789624	10	958,83,113,118,21,53,53,76,63,77,	0,2497,2866,4616,6873,7198,7584,8241,17476,18860,
#Deleted in new
chr12_KZ208916v1_fix	135186	153935	chr12_KZ208916v1_fix:135186-153935	1	-	135798	153853	8553170	11	717,83,113,118,21,53,53,76,71,63,130,	0,2256,2625,4375,6632,6957,7343,8000,8531,17235,18619,
#Deleted in new
chr12_KZ208916v1_fix	135312	260675	chr12_KZ208916v1_fix:135312-260675	1	-	135798	260617	8553170	37	591,83,113,118,21,53,53,76,71,63,45,62,81,128,96,94,98,46,68,62,72,87,81,78,134,79,114,90,75,151,61,132,163,60,117,82,285,	0,2130,2499,4249,6506,6831,7217,7874,8405,17109,17374,18493,47570,51233,53425,60782,62843,63015,65408,66976,81435,82082,85787,86635,89698,91074,91599,91818,92796,93054,93840,114271,114706,116737,119854,121685,125078,
#Deleted in new
chr12_KZ208916v1_fix	135651	153904	chr12_KZ208916v1_fix:135651-153904	0	-	143247	153853	8553170	11	252,83,113,118,21,53,53,76,63,45,99,	0,1791,2160,3910,6167,6492,6878,7535,16770,17035,18154,
#Deleted in new
chr12_KZ208916v1_fix	135666	139804	chr12_KZ208916v1_fix:135666-139804	0	-	135666	135666	8553170	4	237,83,113,243,	0,1776,2145,3895,
#Deleted in new
chr12_KZ208916v1_fix	135709	257371	chr12_KZ208916v1_fix:135709-257371	1	-	135798	257371	789624	38	194,83,113,118,21,53,53,76,71,63,45,62,81,128,96,94,98,46,68,62,72,87,75,81,78,134,79,114,90,75,151,61,132,163,60,117,82,35,	0,1733,2102,3852,6109,6434,6820,7477,8008,16712,16977,18096,47173,50836,53028,60385,62446,62618,65011,66579,81038,81685,84749,85390,86238,89301,90677,91202,91421,92399,92657,93443,113874,114309,116340,119457,121288,121627,
#Deleted in new
chr12_KZ208916v1_fix	135746	153904	chr12_KZ208916v1_fix:135746-153904	1	-	135798	153853	8553170	12	157,83,113,118,21,53,53,76,71,63,45,99,	0,1696,2065,3815,6072,6397,6783,7440,7971,16675,16940,18059,
#Deleted in new
chr12_KZ208916v1_fix	135757	153864	chr12_KZ208916v1_fix:135757-153864	0	-	135798	153864	8553170	12	146,83,113,118,21,53,53,70,71,63,45,59,	0,1685,2054,3804,6061,6386,6772,7435,7960,16664,16929,18048,
#Deleted in new
chr12_KZ208916v1_fix	137203	139701	chr12_KZ208916v1_fix:137203-139701	0	-	137203	137203	8553170	3	322,113,140,	0,608,2358,
#Deleted in new
chr12_KZ208916v1_fix	137252	260617	chr12_KZ208916v1_fix:137252-260617	1	-	137286	260617	789624	37	273,113,118,21,53,53,76,71,63,45,62,81,128,96,94,98,46,68,62,72,87,75,81,78,134,79,114,90,75,151,61,132,163,60,117,82,227,	0,559,2309,4566,4891,5277,5934,6465,15169,15434,16553,45630,49293,51485,58842,60903,61075,63468,65036,79495,80142,83206,83847,84695,87758,89134,89659,89878,90856,91114,91900,112331,112766,114797,117914,119745,123138,
#Deleted in new
chr12_KZ208916v1_fix	137257	138093	chr12_KZ208916v1_fix:137257-138093	0	-	137257	137257	8553170	2	268,282,	0,554,
#Deleted in new
chr12_KZ208916v1_fix	137286	257371	chr12_KZ208916v1_fix:137286-257371	1	-	137286	257371	789624	37	239,113,118,21,53,53,76,71,63,45,62,81,128,96,94,98,46,68,62,72,87,75,81,78,134,79,114,90,75,151,61,132,163,60,117,82,35,	0,525,2275,4532,4857,5243,5900,6431,15135,15400,16519,45596,49259,51451,58808,60869,61041,63434,65002,79461,80108,83172,83813,84661,87724,89100,89625,89844,90822,91080,91866,112297,112732,114763,117880,119711,120050,
#Deleted in new
chr12_KZ208916v1_fix	137479	139668	chr12_KZ208916v1_fix:137479-139668	0	-	137479	137479	8553170	2	445,107,	0,2082,
#Deleted in new
chr12_KZ208916v1_fix	137816	153884	chr12_KZ208916v1_fix:137816-153884	0	-	143247	153853	8553170	8	108,118,14,53,76,63,45,79,	0,1745,4002,4713,5370,14605,14870,15989,
#Deleted in new
chr12_KZ208916v1_fix	141819	153871	chr12_KZ208916v1_fix:141819-153871	0	-	141819	141819	8553170	6	377,53,76,63,45,66,	0,710,1367,10602,10867,11986,
#Deleted in new
chr12_KZ208916v1_fix	142150	142900	chr12_KZ208916v1_fix:142150-142900	0	-	142150	142150	8553170	2	432,144,	0,606,
#Deleted in new
chr12_KZ208916v1_fix	142323	153905	chr12_KZ208916v1_fix:142323-153905	0	-	142323	142323	8553170	4	259,76,63,100,	0,863,10098,11482,
#Deleted in new
chr12_KZ208916v1_fix	142350	153914	chr12_KZ208916v1_fix:142350-153914	0	-	142350	142350	8553170	6	232,76,71,63,45,109,	0,836,1367,10071,10336,11455,
#Deleted in new
chr12_KZ208916v1_fix	142371	153942	chr12_KZ208916v1_fix:142371-153942	0	-	142371	142371	8553170	5	211,76,71,63,137,	0,815,1346,10050,11434,
#Deleted in new
chr12_KZ208916v1_fix	151522	260690	chr12_KZ208916v1_fix:151522-260690	1	-	151672	260617	8553170	26	189,63,45,62,81,128,96,94,98,46,68,62,87,75,81,78,120,114,90,35,132,163,60,117,82,300,	0,899,1164,2283,31360,35023,37215,44572,46633,46805,49198,50766,65872,68936,69577,70425,73488,75389,75608,76586,98061,98496,100527,103644,105475,108868,
#Deleted in new
chr12_KZ208916v1_fix	162410	178896	chr12_KZ208916v1_fix:162410-178896	3	+	170292	176865	789624	5	548,221,140,591,2486,	0,7143,7809,10668,14000,
#Deleted in new
chr12_KZ208916v1_fix	162626	169872	chr12_KZ208916v1_fix:162626-169872	0	+	162626	162626	8553170	2	332,322,	0,6924,
#Deleted in new
chr12_KZ208916v1_fix	162653	178892	chr12_KZ208916v1_fix:162653-178892	0	+	162653	162653	8553170	2	305,2482,	0,13757,
#Deleted in new
chr12_KZ208916v1_fix	162653	169941	chr12_KZ208916v1_fix:162653-169941	0	+	162653	162653	8553170	3	305,185,69,	0,6900,7219,
#Deleted in new
chr12_KZ208916v1_fix	162672	178896	chr12_KZ208916v1_fix:162672-178896	1	+	170292	176865	789624	5	286,185,140,591,2486,	0,6881,7547,10406,13738,
#Deleted in new
chr12_KZ208916v1_fix	162715	173112	chr12_KZ208916v1_fix:162715-173112	0	+	162715	162715	8553170	4	243,221,140,34,	0,6838,7504,10363,
#Deleted in new
chr12_KZ208916v1_fix	162717	173374	chr12_KZ208916v1_fix:162717-173374	0	+	162717	162717	8553170	2	241,296,	0,10361,
#Deleted in new
chr12_KZ208916v1_fix	162727	169960	chr12_KZ208916v1_fix:162727-169960	0	+	162727	162727	8553170	3	231,221,88,	0,6826,7145,
#Deleted in new
chr12_KZ208916v1_fix	162774	178543	chr12_KZ208916v1_fix:162774-178543	1	+	170292	176865	789624	5	184,188,140,591,2133,	0,6776,7445,10304,13636,
#Deleted in new
chr12_KZ208916v1_fix	164225	173290	chr12_KZ208916v1_fix:164225-173290	0	+	170292	173290	8553170	4	60,185,140,212,	0,5328,5994,8853,
#Deleted in new
chr12_KZ208916v1_fix	165379	173298	chr12_KZ208916v1_fix:165379-173298	0	+	170292	173298	8553170	4	42,185,140,220,	0,4174,4840,7699,
#Deleted in new
chr12_KZ208916v1_fix	169706	173245	chr12_KZ208916v1_fix:169706-173245	0	+	169706	169706	8553170	3	253,140,167,	0,513,3372,
#Deleted in new
chr12_KZ208916v1_fix	186568	216771	chr12_KZ208916v1_fix:186568-216771	0	-	186568	186568	8553170	7	105,96,98,46,68,62,24,	0,2169,11587,11759,14152,15720,30179,
#Deleted in new
chr12_KZ208916v1_fix	226173	227023	chr12_KZ208916v1_fix:226173-227023	0	-	226173	226173	8553170	2	292,112,	0,738,
#Deleted in new
chr12_KZ208916v1_fix	260094	265011	chr12_KZ208916v1_fix:260094-265011	3	+	260094	260094	8553170	2	79,236,	0,4681,
#Deleted in new
chr12_KZ208916v1_fix	271345	278718	chr12_KZ208916v1_fix:271345-278718	3	-	271345	271345	789624	2	2229,121,	0,7252,
#Deleted in new
chr12_KZ208916v1_fix	288197	346655	chr12_KZ208916v1_fix:288197-346655	3	-	288349	346575	789624	9	233,249,873,129,136,67,128,41,230,	0,3032,6362,9378,19504,21790,47210,51881,58228,
#Deleted in new
chr12_KZ208916v1_fix	288295	346614	chr12_KZ208916v1_fix:288295-346614	0	-	333349	346575	789624	10	135,249,873,129,136,67,126,128,41,189,	0,2934,6264,9280,19406,21692,44969,47112,51783,58130,
#Deleted in new
chr12_KZ208916v1_fix	292179	310054	chr12_KZ208916v1_fix:292179-310054	1	-	292494	309995	8553170	5	342,873,129,136,67,	0,2380,5396,15522,17808,
#Deleted in new
chr12_KZ208916v1_fix	294920	308285	chr12_KZ208916v1_fix:294920-308285	0	-	294920	294920	8553170	4	512,129,136,62,	0,2655,12781,13303,
#Deleted in new
chr12_KZ208916v1_fix	294920	346611	chr12_KZ208916v1_fix:294920-346611	0	-	294920	294920	8553170	4	512,128,41,267,	0,40487,45158,51424,
#Deleted in new
chr12_KZ208916v1_fix	303459	346571	chr12_KZ208916v1_fix:303459-346571	0	-	303459	303459	8553170	6	80,136,67,128,41,146,	0,4242,6528,31948,36619,42966,
#Deleted in new
chr12_KZ208916v1_fix	312929	457528	chr12_KZ208916v1_fix:312929-457528	0	+	313206	457528	8553170	2	416,161,	0,144438,
#Deleted in new
chr12_KZ208916v1_fix	333599	346679	chr12_KZ208916v1_fix:333599-346679	1	-	335264	346575	789624	3	1936,41,254,	0,6479,12826,
#Deleted in new
chr12_KZ208916v1_fix	346809	353536	chr12_KZ208916v1_fix:346809-353536	3	+	346809	346809	8553170	2	71,558,	0,6169,
#Deleted in new
chr12_KZ208916v1_fix	360356	362676	chr12_KZ208916v1_fix:360356-362676	3	+	360356	360356	8553170	2	80,607,	0,1713,
#Deleted in new
chr12_KZ208916v1_fix	390495	391607	chr12_KZ208916v1_fix:390495-391607	3	+	390495	390495	789624	2	259,330,	0,782,
#Deleted in new
chr12_KZ208916v1_fix	395441	1046066	chr12_KZ208916v1_fix:395441-1046066	1	+	395706	1039315	789624	47	314,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,7051,	0,61926,67027,401650,410241,438778,445864,457516,465486,502617,509625,519096,520243,534264,535496,537177,538050,538509,545887,548548,549904,554528,557755,558353,559285,559658,561185,563215,564577,586971,601149,604314,606509,607821,617499,618255,619360,621607,627215,629768,630407,632118,635224,638410,638840,641121,643574,
#Deleted in new
chr12_KZ208916v1_fix	395441	1039526	chr12_KZ208916v1_fix:395441-1039526	1	+	395706	1039315	8553170	48	314,322,106,140,140,159,197,104,173,75,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,511,	0,61926,67027,401650,410241,438778,445864,457516,465486,500124,502617,509625,519096,520243,534264,535496,537177,538050,538509,545887,548548,549904,554528,557755,558353,559285,559658,561185,563215,564577,586971,601149,604314,606509,607821,617499,618255,619360,621607,627215,629768,630407,632118,635224,638410,638840,641121,643574,
#Deleted in new
chr12_KZ208916v1_fix	395681	963087	chr12_KZ208916v1_fix:395681-963087	1	+	395706	960141	8553170	29	74,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,3069,	0,61686,66787,401410,410001,438538,445624,457276,465246,502377,509385,518856,520003,534024,535256,536937,537810,538269,545647,548308,549871,554288,557515,558113,559045,559418,560945,562975,564337,
#Deleted in new
chr12_KZ208916v1_fix	395706	1039409	chr12_KZ208916v1_fix:395706-1039409	1	+	395706	1039315	789624	48	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,105,129,107,104,333,394,	0,61661,66762,401385,409976,438513,445599,457251,465221,502352,509360,518831,519978,533999,535231,536912,537785,538244,545622,548283,549846,554263,557490,558088,559020,559393,560920,562950,564312,586706,600884,604049,606244,607556,617234,617990,619095,621342,626950,629503,630142,631853,634359,634959,638145,638575,640856,643309,
#Deleted in new
chr12_KZ208916v1_fix	395706	1039409	chr12_KZ208916v1_fix:395706-1039409	1	+	395706	1039315	789624	46	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,129,66,92,166,128,97,103,159,128,135,353,129,107,104,333,394,	0,61661,66762,401385,409976,438513,445599,457251,465221,502352,509360,518831,519978,533999,535231,536912,537785,538244,545622,548283,549846,554263,557490,558088,559020,559393,560920,562950,564312,586706,604049,606244,607556,617234,617990,619095,621342,626893,629503,630142,631853,634959,638145,638575,640856,643309,
#Deleted in new
chr12_KZ208916v1_fix	395706	1039409	chr12_KZ208916v1_fix:395706-1039409	1	+	395706	1039315	789624	49	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,60,107,88,108,53,147,202,159,111,84,84,33,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,394,	0,61661,66762,401385,409976,438513,445599,457251,465221,502352,509360,518831,519978,533999,535231,536912,537785,538244,545622,548283,549639,549846,554263,557490,558088,559020,559393,560920,562950,564312,586038,586706,600884,604049,606244,607556,617234,617990,619095,621342,626950,629503,630142,631853,634959,638145,638575,640856,643309,
#Deleted in new
chr12_KZ208916v1_fix	395706	1039409	chr12_KZ208916v1_fix:395706-1039409	1	+	395706	1039315	789624	47	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,394,	0,61661,66762,401385,409976,438513,445599,457251,465221,502352,509360,518831,519978,533999,535231,536912,537785,538244,545622,548283,549639,554263,557490,558088,559020,559393,560920,562950,564312,586038,600884,604049,606244,607556,617234,617990,619095,621342,626950,629503,630142,631853,634959,638145,638575,640856,643309,
#Deleted in new
chr12_KZ208916v1_fix	395706	1040275	chr12_KZ208916v1_fix:395706-1040275	1	+	395706	1039315	789624	48	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,213,129,107,104,333,1260,	0,61661,66762,401385,409976,438513,445599,456845,465221,502352,509360,518831,519978,533999,535231,536912,537785,538244,545622,548283,549639,554263,557490,558088,559020,559393,560920,562950,564312,586706,600884,604049,606244,607556,617234,617990,619095,621342,626950,629503,630142,631853,632772,634959,638145,638575,640856,643309,
#Deleted in new
chr12_KZ208916v1_fix	395706	1039409	chr12_KZ208916v1_fix:395706-1039409	1	+	395706	1039315	789624	46	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,78,129,66,92,166,128,97,103,159,128,135,353,129,107,104,333,394,	0,61661,66762,401385,409976,438513,445599,457251,465221,502352,509360,518831,519978,533999,535231,536912,537785,538244,545622,548283,549639,554263,557490,558088,559020,559393,560920,562950,564312,586706,604049,606244,607556,617234,617990,619095,621342,626893,629503,630142,631853,634959,638145,638575,640856,643309,
#Deleted in new
chr12_KZ208916v1_fix	395706	1040275	chr12_KZ208916v1_fix:395706-1040275	1	+	395706	1039315	8553170	48	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,213,129,107,104,333,1260,	0,61661,66762,401385,409976,438513,445599,456845,465221,502352,509360,518831,519978,533999,535231,536912,537785,538244,545622,548283,549639,554263,557490,558088,559020,559393,560920,562950,564312,586038,600884,604049,606244,607556,617234,617990,619095,621342,626950,629503,630142,631853,632772,634959,638145,638575,640856,643309,
#Deleted in new
chr12_KZ208916v1_fix	395706	1039409	chr12_KZ208916v1_fix:395706-1039409	1	+	395706	1039315	789624	47	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,195,66,92,166,128,97,103,159,128,135,353,129,107,104,333,394,	0,61661,66762,401385,409976,438513,445599,457251,465221,502352,509360,518831,519978,533999,535231,536912,537785,538244,545622,548283,549639,554263,557490,558088,559020,559393,560920,562950,564312,586706,600884,603983,606244,607556,617234,617990,619095,621342,626893,629503,630142,631853,634959,638145,638575,640856,643309,
#Deleted in new
chr12_KZ208916v1_fix	395706	1039409	chr12_KZ208916v1_fix:395706-1039409	1	+	395706	1039315	789624	48	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,84,33,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,394,	0,61661,66762,401385,409976,438513,445599,457251,465221,502352,509360,518831,519978,533999,535231,536912,537785,538244,545622,548283,549639,554263,557490,558088,559020,559393,560920,562950,564312,586038,586706,600884,604049,606244,607556,617234,617990,619095,621342,626950,629503,630142,631853,634959,638145,638575,640856,643309,
#Deleted in new
chr12_KZ208916v1_fix	395706	1039409	chr12_KZ208916v1_fix:395706-1039409	1	+	395706	1039315	789624	47	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,394,	0,61661,66762,401385,409976,438513,445599,456845,465221,502352,509360,518831,519978,533999,535231,536912,537785,538244,545622,548283,549846,554263,557490,558088,559020,559393,560920,562950,564312,586706,600884,604049,606244,607556,617234,617990,619095,621342,626950,629503,630142,631853,634959,638145,638575,640856,643309,
#Deleted in new
chr12_KZ208916v1_fix	395706	1039409	chr12_KZ208916v1_fix:395706-1039409	1	+	395706	1039315	789624	47	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,394,	0,61661,66762,401385,409976,438513,445599,457251,465221,502352,509360,518831,519978,533999,535231,536912,537785,538244,545622,548283,549846,554263,557490,558088,559020,559393,560920,562950,564312,586706,600884,604049,606244,607556,617234,617990,619095,621342,626950,629503,630142,631853,634959,638145,638575,640856,643309,
#Deleted in new
chr12_KZ208916v1_fix	395706	1039409	chr12_KZ208916v1_fix:395706-1039409	1	+	395706	1039315	789624	48	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,394,	0,61661,66762,401385,409976,438513,445599,457251,465221,502352,509360,518831,519978,533999,535231,536912,537785,538244,545622,548283,549639,549846,554263,557490,558088,559020,559393,560920,562950,564312,586706,600884,604049,606244,607556,617234,617990,619095,621342,626950,629503,630142,631853,634959,638145,638575,640856,643309,
#Deleted in new
chr12_KZ208916v1_fix	395706	1039409	chr12_KZ208916v1_fix:395706-1039409	1	+	395706	1039315	789624	47	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,84,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,394,	0,61661,66762,401385,409976,438513,445599,457251,465221,502352,509360,518831,519978,533999,535231,536912,537785,538244,545622,548283,549846,554263,557490,558088,559020,559393,560920,562950,564312,586038,586706,604049,606244,607556,617234,617990,619095,621342,626950,629503,630142,631853,634959,638145,638575,640856,643309,
#Deleted in new
chr12_KZ208916v1_fix	395706	1039409	chr12_KZ208916v1_fix:395706-1039409	1	+	395706	1039315	789624	47	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,159,128,135,353,129,107,104,333,394,	0,61661,66762,401385,409976,438513,445599,457251,465221,502352,509360,518831,519978,533999,535231,536912,537785,538244,545622,548283,549639,554263,557490,558088,559020,559393,560920,562950,564312,586706,600884,604049,606244,607556,617234,617990,619095,621342,626893,629503,630142,631853,634959,638145,638575,640856,643309,
#Deleted in new
chr12_KZ208916v1_fix	395706	1039409	chr12_KZ208916v1_fix:395706-1039409	3	+	395706	1039315	789624	47	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,159,128,135,353,129,107,104,333,394,	0,61661,66762,401385,409976,438513,445599,457251,465221,502352,509360,518831,519978,533999,535231,536912,537785,538244,545622,548283,549846,554263,557490,558088,559020,559393,560920,562950,564312,586706,600884,604049,606244,607556,617234,617990,619095,621342,626893,629503,630142,631853,634959,638145,638575,640856,643309,
#Deleted in new
chr12_KZ208916v1_fix	395706	1039409	chr12_KZ208916v1_fix:395706-1039409	1	+	395706	1039315	789624	47	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,394,	0,61661,66762,401385,409976,438513,445599,457251,465221,502352,509360,518831,519978,533999,535231,536912,537785,538244,545622,548283,549846,554263,557490,558088,559020,559393,560920,562950,564312,586038,600884,604049,606244,607556,617234,617990,619095,621342,626950,629503,630142,631853,634959,638145,638575,640856,643309,
#Deleted in new
chr12_KZ208916v1_fix	395706	1040275	chr12_KZ208916v1_fix:395706-1040275	1	+	395706	1039315	789624	48	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,105,129,107,104,333,1260,	0,61661,66762,401385,409976,438513,445599,456845,465221,502352,509360,518831,519978,533999,535231,536912,537785,538244,545622,548283,549639,554263,557490,558088,559020,559393,560920,562950,564312,586038,600884,604049,606244,607556,617234,617990,619095,621342,626950,629503,630142,631853,634359,634959,638145,638575,640856,643309,
#Deleted in new
chr12_KZ208916v1_fix	395706	1039409	chr12_KZ208916v1_fix:395706-1039409	1	+	395706	1039315	789624	47	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,159,128,135,353,129,107,104,333,394,	0,61661,66762,401385,409976,438513,445599,457251,465221,502352,509360,518831,519978,533999,535231,536912,537785,538244,545622,548283,549639,554263,557490,558088,559020,559393,560920,562950,564312,586038,600884,604049,606244,607556,617234,617990,619095,621342,626893,629503,630142,631853,634959,638145,638575,640856,643309,
#Deleted in new
chr12_KZ208916v1_fix	395706	1040275	chr12_KZ208916v1_fix:395706-1040275	1	+	395706	1039315	789624	47	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,33,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,1260,	0,61661,66762,401385,409976,438513,445599,456845,465221,502352,509360,518831,519978,533999,535231,536912,537785,538244,545622,548283,549639,554263,557490,558088,559020,559393,560920,562950,564312,586038,600884,604049,606244,607556,617234,617990,619095,621342,626950,629503,630142,631853,634959,638145,638575,640856,643309,
#Deleted in new
chr12_KZ208916v1_fix	395706	1039409	chr12_KZ208916v1_fix:395706-1039409	1	+	395706	1039315	789624	46	49,322,106,140,140,159,197,104,173,91,27,161,226,208,121,115,121,70,133,130,60,107,88,108,53,147,202,159,111,84,129,66,92,166,128,97,103,159,128,135,353,129,107,104,333,394,	0,61661,66762,401385,409976,438513,445599,457251,465221,502352,509360,518831,519978,533999,535231,536912,537785,538244,545622,548283,549639,554263,557490,558088,559020,559393,560920,562950,564312,586706,604049,606244,607556,617234,617990,619095,621342,626893,629503,630142,631853,634959,638145,638575,640856,643309,
#Deleted in new
chr12_KZ208916v1_fix	559605	560064	chr12_KZ208916v1_fix:559605-560064	3	-	559605	559605	8553170	1	459,	0,
#Deleted in new
chr12_KZ208916v1_fix	562680	565623	chr12_KZ208916v1_fix:562680-565623	3	-	562680	562680	789624	4	318,81,221,115,	0,1078,1663,2828,
#Deleted in new
chr12_KZ208916v1_fix	617891	637053	chr12_KZ208916v1_fix:617891-637053	3	+	617891	617891	789624	3	166,186,270,	0,18243,18892,
#Deleted in new
chr12_KZ208916v1_fix	680976	683818	chr12_KZ208916v1_fix:680976-683818	3	-	680976	680976	8553170	3	800,231,515,	0,1070,2327,
#Deleted in new
chr12_KZ208916v1_fix	788304	805508	chr12_KZ208916v1_fix:788304-805508	3	-	788304	788304	8553170	3	2983,82,126,	0,8964,17078,
#Deleted in new
chr12_KZ208916v1_fix	852551	914698	chr12_KZ208916v1_fix:852551-914698	0	+	852551	852551	8553170	6	104,173,91,113,27,161,	0,8376,45507,46108,52515,61986,
#Deleted in new
chr12_KZ208916v1_fix	930999	944322	chr12_KZ208916v1_fix:930999-944322	0	+	930999	944221	8553170	6	59,115,121,70,133,333,	0,1619,2492,2951,10329,12990,
#Deleted in new
chr12_KZ208916v1_fix	951465	955556	chr12_KZ208916v1_fix:951465-955556	3	-	951465	951465	8553170	2	424,20,	0,4071,
#Deleted in new
chr12_KZ208916v1_fix	955995	958815	chr12_KZ208916v1_fix:955995-958815	0	+	956108	958815	8553170	3	184,202,159,	0,631,2661,
#Deleted in new
chr12_KZ208916v1_fix	989573	999863	chr12_KZ208916v1_fix:989573-999863	0	+	989573	989573	8553170	4	302,149,33,108,	0,4926,7017,10182,
#Deleted in new
chr12_KZ208916v1_fix	989582	1039383	chr12_KZ208916v1_fix:989582-1039383	1	+	989857	1039315	8553170	17	293,129,66,92,166,128,97,103,102,128,135,353,129,107,104,333,368,	0,10173,12368,13680,23358,24114,25219,27466,33074,35627,36266,37977,41083,44269,44699,46980,49433,
#Deleted in new
chr12_KZ208916v1_fix	999178	1003309	chr12_KZ208916v1_fix:999178-1003309	0	+	999178	999178	8553170	3	706,66,47,	0,2772,4084,
#Deleted in new
chr12_KZ208916v1_fix	1008052	1009085	chr12_KZ208916v1_fix:1008052-1009085	7	+	1008052	1008052	16724991	2	604,128,	0,905,
#Deleted in new
chr12_KZ208916v1_fix	1014731	1025929	chr12_KZ208916v1_fix:1014731-1025929	0	+	1014731	1014731	8553170	5	167,103,102,128,81,	0,2317,7925,10478,11117,
#Deleted in new
chr12_KZ208916v1_fix	1016615	1020336	chr12_KZ208916v1_fix:1016615-1020336	3	-	1016615	1016615	789624	2	517,92,	0,3629,
#Deleted in new
chr12_KZ208916v1_fix	1024116	1039234	chr12_KZ208916v1_fix:1024116-1039234	3	-	1024116	1024116	789624	4	1897,71,173,50,	0,14139,14806,15068,
#Deleted in new
chr12_KZ208916v1_fix	1037978	1039316	chr12_KZ208916v1_fix:1037978-1039316	1	-	1037978	1037978	8553170	2	348,394,	0,944,
#Deleted in new
chr12_KZ208916v1_fix	1038013	1039273	chr12_KZ208916v1_fix:1038013-1039273	0	-	1038013	1038013	8553170	3	313,173,89,	0,909,1171,
#Deleted in new
chr12_KZ208917v1_fix	10677	10788	chr12_KZ208917v1_fix:10677-10788	3	+	10677	10677	8553170	1	111,	0,
#Deleted in new
chr12_KZ208917v1_fix	32707	47411	chr12_KZ208917v1_fix:32707-47411	1	+	32707	47411	8553170	2	114,600,	0,14104,
#Deleted in new
chr12_KZ208917v1_fix	32707	47411	chr12_KZ208917v1_fix:32707-47411	3	+	32707	47411	789624	2	114,600,	0,14104,
#Deleted in new
chr12_KZ559112v1_alt	41977	42728	chr12_KZ559112v1_alt:41977-42728	7	-	41977	41977	16724991	2	372,378,	0,373,
#Deleted in new
chr12_KZ559112v1_alt	91595	93076	chr12_KZ559112v1_alt:91595-93076	3	-	91595	91595	8553170	3	177,131,197,	0,652,1284,
#Deleted in new
chr12_KZ559112v1_alt	92184	92533	chr12_KZ559112v1_alt:92184-92533	0	-	92184	92184	8553170	2	194,48,	0,301,
#Partially deleted in new
chr13	18174009	18178465	chr13:18174009-18178465	7	-	18174009	18174009	16724991	4	94,71,153,911,	0,432,2008,3545,
#Partially deleted in new
chr13	18195296	18232024	chr13:18195296-18232024	3	+	18195296	18195296	789624	8	115,59,25,87,66,62,34,1522,	0,23702,24229,27198,32182,34250,34777,35206,
#Deleted in new
chr13	18206569	18207466	chr13:18206569-18207466	7	-	18206569	18206569	16724991	1	897,	0,
#Deleted in new
chr13	18248912	18249035	chr13:18248912-18249035	7	-	18248912	18248912	16724991	1	123,	0,
#Partially deleted in new
chr13	18253525	18270822	chr13:18253525-18270822	7	-	18253525	18253525	16724991	12	147,114,113,127,188,137,150,153,197,87,131,164,	0,451,646,860,1219,4957,5618,7799,8363,13681,13902,17133,
#Partially deleted in new
chr13	18279319	18309934	chr13:18279319-18309934	7	-	18279319	18279319	16724991	6	411,405,402,390,410,378,	0,11177,14855,22132,27935,30237,
#Deleted in new
chr13	18297553	18298733	chr13:18297553-18298733	7	+	18297553	18297553	16724991	1	1180,	0,
#Partially deleted in new
chr13	18331932	18348596	chr13:18331932-18348596	7	+	18331932	18331932	16724991	8	120,117,39,187,165,110,66,213,	0,2886,7250,12557,12999,14500,15119,16451,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	18408805	18423100	chr13:18408805-18423100	5	+	18408805	18408805	16724991	5	265,115,2492,65,323,	0,4321,4917,11098,13972,
#Partially deleted in new
chr13	18413126	18431605	chr13:18413126-18431605	7	+	18413126	18413126	16724991	7	115,174,108,163,65,88,24,	0,596,2980,4052,6777,9651,18455,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	18413727	18422993	chr13:18413727-18422993	4	+	18413727	18413727	16724991	4	169,108,65,216,	0,2379,6176,9050,
#Deleted in new
chr13	18418525	18418632	chr13:18418525-18418632	3	+	18418525	18418525	8553170	1	107,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	18467171	18485448	chr13:18467171-18485448	7	-	18467171	18467171	16724991	5	2806,31,115,73,115,	0,3000,13833,17559,18162,
#Deleted in new
chr13	18491903	18492419	chr13:18491903-18492419	7	+	18491903	18491903	16724991	1	516,	0,
#Partially deleted in new
chr13	18540496	18550697	chr13:18540496-18550697	3	+	18540496	18540496	8553170	2	433,408,	0,9793,
#Deleted in new
chr13	18609131	18609702	chr13:18609131-18609702	7	+	18609131	18609131	16724991	1	571,	0,
#Deleted in new
chr13	18610297	18611675	chr13:18610297-18611675	3	-	18610297	18610297	8553170	2	557,106,	0,1272,
#Deleted in new
chr13	18665234	18667221	chr13:18665234-18667221	7	+	18665234	18665234	16724991	1	1987,	0,
#Partially deleted in new
chr13	18672826	18676163	chr13:18672826-18676163	3	+	18672826	18672826	8553170	2	282,176,	0,3161,
#Deleted in new
chr13	18680493	18681700	chr13:18680493-18681700	7	+	18680493	18680493	16724991	1	1207,	0,
#Deleted in new
chr13	18697002	18697507	chr13:18697002-18697507	7	+	18697002	18697002	16724991	1	505,	0,
#Deleted in new
chr13	18724414	18724904	chr13:18724414-18724904	7	-	18724414	18724414	16724991	1	490,	0,
#Deleted in new
chr13	18726705	18727414	chr13:18726705-18727414	7	+	18726705	18726705	16724991	1	709,	0,
#Deleted in new
chr13	18734079	18734896	chr13:18734079-18734896	7	+	18734079	18734079	16724991	1	817,	0,
#Deleted in new
chr13	18741729	18742718	chr13:18741729-18742718	7	-	18741729	18741729	16724991	3	122,61,298,	0,304,691,
#Deleted in new
chr13	18807278	18808018	chr13:18807278-18808018	7	-	18807278	18807278	16724991	1	740,	0,
#Deleted in new
chr13	18809829	18810048	chr13:18809829-18810048	7	+	18809829	18809829	16724991	1	219,	0,
#Partially deleted in new
chr13	18816717	18871967	chr13:18816717-18871967	7	-	18816717	18816717	16724991	19	229,180,325,130,110,133,385,533,181,120,71,73,29,86,70,31,49,136,107,	0,1556,2322,9948,12104,16999,18667,21551,23259,24876,29025,35054,35219,38059,42086,44796,51367,53950,55143,
#Deleted in new
chr13	18837767	18838098	chr13:18837767-18838098	7	-	18837767	18837767	16724991	1	331,	0,
#Deleted in new
chr13	18869184	18869291	chr13:18869184-18869291	3	-	18869184	18869184	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	18880053	18880157	chr13:18880053-18880157	3	+	18880053	18880053	8553170	1	104,	0,
#Deleted in new
chr13	18892259	18895230	chr13:18892259-18895230	7	-	18892259	18892259	16724991	1	2971,	0,
#Deleted in new
chr13	18905438	18907810	chr13:18905438-18907810	3	+	18905438	18905438	8553170	4	138,84,162,176,	0,588,1058,2196,
#Partially deleted in new
chr13	18921888	18944284	chr13:18921888-18944284	3	-	18921888	18921888	8553170	4	521,223,194,145,	0,1652,10680,22251,
#Partially deleted in new
chr13	18946754	19062718	chr13:18946754-19062718	7	-	18946754	18946754	16724991	20	240,160,71,179,116,120,392,80,99,106,88,159,92,114,88,162,185,117,169,128,	0,4915,5766,5960,8173,8782,11271,12238,13341,15229,15803,17194,18449,101235,101815,103204,104406,106156,109648,115836,
#Deleted in new
chr13	18946901	18952587	chr13:18946901-18952587	4	-	18946901	18946901	16724991	3	93,160,67,	0,4768,5619,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	18965269	19009436	chr13:18965269-19009436	4	-	18965269	18965269	16724991	7	97,153,68,98,163,90,449,	0,14861,18084,24627,25299,33053,43718,
#Partially deleted in new
chr13	19008258	19012559	chr13:19008258-19012559	3	+	19008258	19008258	789624	4	881,170,132,880,	0,1015,3174,3421,
#Partially deleted in new
chr13	19008263	19011849	chr13:19008263-19011849	0	+	19008263	19008263	8553170	3	876,141,417,	0,1039,3169,
#Partially deleted in new
chr13	19015486	19019336	chr13:19015486-19019336	7	-	19015486	19015486	16724991	5	202,135,125,214,103,	0,1701,2667,3131,3747,
#Partially deleted in new
chr13	19026000	19032626	chr13:19026000-19032626	7	-	19026000	19026000	16724991	4	31,185,134,144,	0,202,851,6482,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	19027836	19028701	chr13:19027836-19028701	3	+	19027836	19027836	8553170	2	72,127,	0,738,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	19088486	19088581	chr13:19088486-19088581	7	+	19088486	19088486	16724991	1	95,	0,
#Partially deleted in new
chr13	19126398	19139611	chr13:19126398-19139611	7	+	19126398	19126398	16724991	7	216,81,103,92,118,92,200,	0,535,1369,2627,4893,5093,13013,
#Deleted in new
chr13	19151553	19152307	chr13:19151553-19152307	7	-	19151553	19151553	16724991	4	115,76,52,136,	0,324,480,618,
#Partially deleted in new
chr13	19152566	19171194	chr13:19152566-19171194	7	-	19152566	19152566	16724991	14	115,144,127,176,101,91,146,72,133,150,53,107,76,143,	0,274,562,950,1497,2071,2770,9472,13398,17347,17621,17780,18256,18485,
#Partially deleted in new
chr13	19172772	19172925	chr13:19172772-19172925	7	+	19172772	19172772	16724991	1	153,	0,
#Partially deleted in new
chr13	19173769	19181852	chr13:19173769-19181852	3	-	19173862	19181747	789624	5	390,681,149,223,108,	0,3157,4476,5571,7975,
#Partially deleted in new
chr13	19173781	19181795	chr13:19173781-19181795	1	-	19173862	19181747	789624	6	165,117,681,149,223,51,	0,261,3145,4464,5559,7963,
#Partially deleted in new
chr13	19185224	19187349	chr13:19185224-19187349	7	+	19185224	19185224	16724991	2	118,230,	0,1895,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	19201636	19227432	chr13:19201636-19227432	7	-	19201636	19201636	16724991	5	186,170,58,66,185,	0,2703,6846,18073,25611,
#Deleted in new
chr13	19262796	19263145	chr13:19262796-19263145	0	-	19262796	19262796	8553170	1	349,	0,
#Deleted in new
chr13	19262796	19263873	chr13:19262796-19263873	3	-	19262796	19262796	8553170	3	235,74,91,	0,413,986,
#Partially deleted in new
chr13	19290592	19344825	chr13:19290592-19344825	7	-	19290592	19290592	16724991	15	158,925,138,184,216,141,39,168,167,71,73,65,79,73,251,	0,1554,3945,4608,6042,19049,24118,26294,30780,38945,42806,43596,45482,48864,53982,
#Deleted in new
chr13	19304592	19305625	chr13:19304592-19305625	7	-	19304592	19304592	16724991	1	1033,	0,
#Partially deleted in new
chr13	19345048	19346749	chr13:19345048-19346749	3	+	19345048	19345048	789624	2	169,885,	0,816,
#Partially deleted in new
chr13	19349136	19407962	chr13:19349136-19407962	7	+	19349136	19349136	16724991	21	65,76,114,138,96,184,157,123,132,87,104,167,82,81,96,123,251,825,100,132,193,	0,1011,2191,8297,10152,17438,17853,20398,25846,27081,29735,32048,32470,36837,37893,38606,44945,45503,48694,53312,58633,
#Partially deleted in new
chr13	19382453	19383072	chr13:19382453-19383072	7	+	19382453	19382453	16724991	1	619,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	19408041	19409529	chr13:19408041-19409529	3	-	19408041	19408041	8553170	2	895,164,	0,1324,
#Partially deleted in new
chr13	19411230	19416188	chr13:19411230-19416188	7	+	19411230	19411230	16724991	3	54,163,121,	0,4038,4837,
#Partially deleted in new
chr13	19422876	19503277	chr13:19422876-19503277	1	-	19423061	19503234	789624	19	288,71,93,80,106,81,62,89,82,61,65,64,100,162,51,60,54,54,54,	0,2070,3548,7591,9596,13349,15215,27199,27386,28288,41579,42378,42588,51037,52696,59611,69973,70571,80347,
#Partially deleted in new
chr13	19422882	19503279	chr13:19422882-19503279	1	-	19423061	19503234	789624	17	282,71,93,80,106,81,62,89,82,61,65,64,100,162,54,54,56,	0,2064,3542,7585,9590,13343,15209,27193,27380,28282,41573,42372,42582,51031,69967,70565,80341,
#Partially deleted in new
chr13	19422882	19505940	chr13:19422882-19505940	1	-	19423061	19503234	789624	18	282,71,93,80,106,81,62,89,82,61,65,64,100,60,54,54,54,194,	0,2064,3542,7585,9590,13343,15209,27193,27380,28282,41573,42372,42582,59605,69967,70565,80341,82864,
#Partially deleted in new
chr13	19422882	19503279	chr13:19422882-19503279	1	-	19423061	19503234	789624	20	282,71,93,80,106,81,62,89,82,61,65,64,100,120,162,51,60,54,54,56,	0,2064,3542,7585,9590,13343,15209,27193,27380,28282,41573,42372,42582,44342,51031,52690,59605,69967,70565,80341,
#Partially deleted in new
chr13	19423051	19536762	chr13:19423051-19536762	3	-	19423061	19503234	789624	18	113,71,93,80,106,81,62,89,82,61,65,64,100,162,54,54,54,167,	0,1895,3373,7416,9421,13174,15040,27024,27211,28113,41404,42203,42413,50862,69798,70396,80172,113544,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr13	19423051	19503234	chr13:19423051-19503234	0	-	19425728	19503234	789624	16	113,71,127,80,106,81,62,89,82,61,65,64,100,54,54,11,	0,1895,2655,7416,9421,13174,15040,27024,27211,28113,41404,42203,42413,69798,70396,80172,
#Partially deleted in new
chr13	19458397	19458718	chr13:19458397-19458718	7	-	19458397	19458397	16724991	1	321,	0,
#Partially deleted in new
chr13	19552570	19570288	chr13:19552570-19570288	7	-	19552570	19552570	16724991	4	144,74,141,159,	0,12960,16108,17559,
#Partially deleted in new
chr13	19560012	19561269	chr13:19560012-19561269	7	-	19560012	19560012	16724991	1	1257,	0,
#Partially deleted in new
chr13	19561327	19588238	chr13:19561327-19588238	3	+	19561327	19561327	8553170	5	186,151,213,140,271,	0,996,3274,5723,26640,
#Partially deleted in new
chr13	19563588	19564900	chr13:19563588-19564900	7	-	19563588	19563588	16724991	1	1312,	0,
#Deleted in new
chr13	19587117	19588350	chr13:19587117-19588350	0	+	19587117	19587117	789624	2	39,383,	0,850,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr13	19633680	19673459	chr13:19633680-19673459	3	+	19633748	19671875	0	14	281,156,849,100,258,126,89,141,87,155,155,128,84,1626,	0,8434,12762,14741,16322,25314,25520,28017,29359,32744,34696,36555,37525,38153,
#Deleted in new
chr13	19646753	19650412	chr13:19646753-19650412	0	+	19646753	19650298	789624	3	538,100,410,	0,1668,3249,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	19658994	19661090	chr13:19658994-19661090	0	+	19658994	19658994	8553170	3	126,89,152,	0,206,1944,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	19670339	19671942	chr13:19670339-19671942	0	+	19670339	19670339	8553170	3	24,450,109,	0,500,1494,
#Partially deleted in new
chr13	19674623	19675884	chr13:19674623-19675884	3	+	19674623	19674623	8553170	2	109,267,	0,994,
#Partially deleted in new
chr13	19674751	19677938	chr13:19674751-19677938	0	-	19674751	19674751	8553170	2	233,215,	0,2972,
#Partially deleted in new
chr13	19674755	19782917	chr13:19674755-19782917	0	-	19677799	19782757	0	8	229,100,106,85,197,96,302,532,	0,2968,55483,66809,76515,84567,97486,107630,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	19674755	19679110	chr13:19674755-19679110	0	-	19674755	19674755	8553170	2	898,1387,	0,2968,
#Partially deleted in new
chr13	19675387	19782942	chr13:19675387-19782942	0	-	19677799	19782757	0	8	266,100,106,85,197,96,302,557,	0,2336,54851,66177,75883,83935,96854,106998,
#Partially deleted in new
chr13	19675428	19730316	chr13:19675428-19730316	0	-	19677818	19730316	789624	4	225,100,19,78,	0,2295,23951,54810,
#Partially deleted in new
chr13	19702499	19782917	chr13:19702499-19782917	3	-	19703174	19782757	0	9	861,170,58,106,85,197,96,302,532,	0,3162,7042,27739,39065,48771,56823,69742,79886,
#Partially deleted in new
chr13	19702870	19783019	chr13:19702870-19783019	1	-	19703174	19782757	0	10	490,170,58,106,85,197,96,302,406,103,	0,2791,6671,27368,38694,48400,56452,69371,79515,80046,
#Partially deleted in new
chr13	19759346	19783002	chr13:19759346-19783002	0	-	19759346	19782757	789624	4	72,302,406,86,	0,12895,23039,23570,
#Deleted in new
chr13	19818120	19818619	chr13:19818120-19818619	7	-	19818120	19818120	16724991	1	499,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	19823481	19851796	chr13:19823481-19851796	0	-	19823481	19823481	8553170	5	1754,213,166,286,442,	0,11995,14174,15218,27873,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	19823481	19863612	chr13:19823481-19863612	0	-	19823481	19823481	8553170	6	1754,213,166,836,68,163,	0,11995,14174,27873,38917,39968,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	19823483	19863636	chr13:19823483-19863636	3	-	19824476	19852180	0	8	1752,213,166,286,94,502,68,187,	0,11993,14172,15216,27871,28205,38915,39966,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	19823852	19852150	chr13:19823852-19852150	0	-	19824476	19852150	789624	6	1383,213,166,286,94,462,	0,11624,13803,14847,27502,27836,
#Partially deleted in new
chr13	19837452	19863508	chr13:19837452-19863508	1	-	19837780	19852180	0	5	369,94,502,68,59,	0,13902,14236,24946,25997,
#Partially deleted in new
chr13	19837464	19863524	chr13:19837464-19863524	1	-	19837544	19852180	0	6	357,286,94,502,68,75,	0,1235,13890,14224,24934,25985,
#Partially deleted in new
chr13	19837464	19863524	chr13:19837464-19863524	0	-	19837464	19837464	8553170	5	357,286,836,68,75,	0,1235,13890,24934,25985,
#Partially deleted in new
chr13	19837464	19863524	chr13:19837464-19863524	0	-	19837464	19837464	8553170	4	357,836,68,75,	0,13890,24934,25985,
#Deleted in new
chr13	19863857	19865048	chr13:19863857-19865048	3	+	19863857	19863857	8553170	1	1191,	0,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr13	19958669	20091829	chr13:19958669-20091829	3	+	19993072	20086014	789624	25	172,69,857,286,166,213,72,151,116,117,151,173,166,35,130,116,172,126,95,169,152,115,252,121,6008,	0,1288,34393,44180,46404,47704,60877,67942,68533,72649,75584,78067,92763,93607,99905,100777,102383,104176,105781,108181,108569,123346,124111,124986,127152,
#Partially deleted in new
chr13	19958676	20019963	chr13:19958676-20019963	0	+	19958676	19958676	8553170	8	165,69,502,94,286,166,213,417,	0,1281,34386,35149,44173,46397,47697,60870,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr13	19958707	20091829	chr13:19958707-20091829	1	+	19993072	20086014	789624	26	64,69,47,857,286,166,213,72,151,116,117,151,173,166,35,130,116,172,126,95,169,152,115,252,121,6008,	0,1250,11317,34355,44142,46366,47666,60839,67904,68495,72611,75546,78029,92725,93569,99867,100739,102345,104138,105743,108143,108531,123308,124073,124948,127114,
#Partially deleted in new
chr13	19958782	20086746	chr13:19958782-20086746	1	+	19993072	20086014	789624	26	59,69,47,857,286,166,213,72,151,116,117,151,173,166,35,130,116,172,126,95,169,152,115,252,121,925,	0,1175,11242,34280,44067,46291,47591,60764,67829,68420,72536,75471,77954,92650,93494,99792,100664,102270,104063,105668,108068,108456,123233,123998,124873,127039,
#Partially deleted in new
chr13	19959858	20003092	chr13:19959858-20003092	0	+	19993072	20003092	789624	5	168,62,502,94,243,	0,5361,33204,33967,42991,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr13	20024393	20086691	chr13:20024393-20086691	0	+	20024393	20024393	8553170	18	2369,116,121,151,177,158,35,130,116,172,126,95,169,152,115,252,121,870,	0,2809,6925,9860,12343,27047,27883,34181,35053,36659,38452,40057,42457,42845,57622,58387,59262,61428,
#Partially deleted in new
chr13	20025306	20031379	chr13:20025306-20031379	0	+	20025306	20025306	8553170	5	69,151,116,80,61,	0,1305,1896,2678,6012,
#Partially deleted in new
chr13	20026518	20086747	chr13:20026518-20086747	0	+	20026518	20026518	8553170	19	244,116,80,117,151,173,166,35,130,116,172,126,95,169,152,115,252,121,926,	0,684,1466,4800,7735,10218,24914,25758,32056,32928,34534,36327,37932,40332,40720,55497,56262,57137,59303,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	20066577	20083757	chr13:20066577-20083757	0	+	20066577	20066577	8553170	5	442,152,115,252,102,	0,661,15438,16203,17078,
#Deleted in new
chr13	20066978	20068349	chr13:20066978-20068349	0	+	20066978	20066978	8553170	3	41,152,261,	0,260,1110,
#Partially deleted in new
chr13	20070249	20072136	chr13:20070249-20072136	7	-	20070249	20070249	16724991	3	264,227,312,	0,570,1575,
#Partially deleted in new
chr13	20083009	20086011	chr13:20083009-20086011	0	+	20083009	20083009	8553170	3	23,146,190,	0,621,2812,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	20092631	20094144	chr13:20092631-20094144	3	+	20092631	20092631	8553170	1	1513,	0,
#Deleted in new
chr13	20102700	20103230	chr13:20102700-20103230	3	+	20102700	20102700	789624	2	126,305,	0,225,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	20138254	20161049	chr13:20138254-20161049	3	-	20141980	20143288	789624	2	5051,160,	0,22635,
#Deleted in new
chr13	20178977	20179462	chr13:20178977-20179462	7	-	20178977	20178977	16724991	1	485,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	20181530	20181942	chr13:20181530-20181942	3	+	20181530	20181530	8553170	1	412,	0,
#Deleted in new
chr13	20187462	20189780	chr13:20187462-20189780	1	-	20188900	20189581	0	1	2318,	0,
#Deleted in new
chr13	20187469	20192938	chr13:20187469-20192938	1	-	20188900	20189581	0	2	2134,156,	0,5313,
#Deleted in new
chr13	20187469	20193010	chr13:20187469-20193010	3	-	20188900	20189581	0	2	2134,228,	0,5313,
#Deleted in new
chr13	20194411	20196005	chr13:20194411-20196005	3	+	20194411	20194411	8553170	1	1594,	0,
#Partially deleted in new
chr13	20221961	20231233	chr13:20221961-20231233	1	-	20222694	20223480	789624	3	1534,170,368,	0,7618,8904,
#Partially deleted in new
chr13	20221961	20232319	chr13:20221961-20232319	1	-	20222694	20223480	789624	5	1534,170,110,124,126,	0,7618,8736,9420,10232,
#Partially deleted in new
chr13	20221968	20232395	chr13:20221968-20232395	3	-	20222694	20223480	789624	5	1527,170,110,124,202,	0,7611,8729,9413,10225,
#Partially deleted in new
chr13	20221970	20232303	chr13:20221970-20232303	1	-	20222694	20223480	789624	3	1525,170,110,	0,7609,10223,
#Partially deleted in new
chr13	20221970	20232365	chr13:20221970-20232365	1	-	20222694	20223480	789624	4	1525,170,124,172,	0,7609,9411,10223,
#Partially deleted in new
chr13	20221975	20232340	chr13:20221975-20232340	1	-	20222694	20223480	789624	4	1520,170,111,147,	0,7604,9406,10218,
#Partially deleted in new
chr13	20221975	20232313	chr13:20221975-20232313	1	-	20222694	20223480	789624	5	1520,170,196,124,120,	0,7604,8890,9406,10218,
#Partially deleted in new
chr13	20221976	20232319	chr13:20221976-20232319	1	-	20222694	20223480	789624	5	1519,170,116,124,126,	0,7603,8721,9405,10217,
#Partially deleted in new
chr13	20221995	20232191	chr13:20221995-20232191	1	-	20222694	20223480	789624	5	1500,170,110,124,95,	0,7584,8702,9386,10101,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	20222057	20225683	chr13:20222057-20225683	1	-	20222694	20223480	789624	2	1438,402,	0,3224,
#Partially deleted in new
chr13	20222483	20230978	chr13:20222483-20230978	1	-	20222694	20223480	789624	4	1012,170,110,64,	0,7096,8214,8431,
#Partially deleted in new
chr13	20223156	20231409	chr13:20223156-20231409	0	-	20223156	20223480	789624	4	339,170,72,28,	0,6423,7585,8225,
#Partially deleted in new
chr13	20223171	20229787	chr13:20223171-20229787	0	-	20223171	20223480	789624	2	324,208,	0,6408,
#Partially deleted in new
chr13	20223244	20230978	chr13:20223244-20230978	0	-	20223244	20223480	789624	3	251,191,113,	0,6335,7621,
#Partially deleted in new
chr13	20223344	20230084	chr13:20223344-20230084	0	-	20223344	20223480	789624	3	151,170,251,	0,6235,6489,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr13	20403665	20525819	chr13:20403665-20525819	0	-	20476947	20525794	789624	10	577,107,106,195,162,109,122,127,108,66,	0,969,9616,28436,35927,69300,73205,85704,108777,122088,
#Partially deleted in new
chr13	20403666	20525857	chr13:20403666-20525857	3	-	20404128	20525794	0	8	576,107,106,195,162,127,108,104,	0,968,9615,28435,35926,85703,108776,122087,
#Partially deleted in new
chr13	20403666	20525865	chr13:20403666-20525865	1	-	20404128	20525794	789624	7	576,107,106,195,127,108,112,	0,968,9615,28435,85703,108776,122087,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	20403669	20502498	chr13:20403669-20502498	0	-	20403669	20403669	8553170	7	573,107,106,195,162,127,106,	0,965,9612,28432,35923,85700,98723,
#Partially deleted in new
chr13	20403670	20525857	chr13:20403670-20525857	1	-	20404128	20512525	0	9	572,107,106,195,162,127,108,100,104,	0,964,9611,28431,35922,85699,108772,112050,122083,
#Partially deleted in new
chr13	20403673	20525873	chr13:20403673-20525873	1	-	20404128	20512525	0	9	569,107,106,195,162,127,108,231,120,	0,961,9608,28428,35919,85696,108769,109777,122080,
#Partially deleted in new
chr13	20403701	20525803	chr13:20403701-20525803	0	-	20472993	20525794	789624	10	541,107,106,687,195,162,109,127,108,50,	0,933,9580,14696,28400,35891,69264,85668,108741,122052,
#Partially deleted in new
chr13	20403739	20525825	chr13:20403739-20525825	0	-	20419027	20525794	789624	9	503,107,106,687,195,162,127,108,72,	0,895,9542,14658,28362,35853,85630,108703,122014,
#Partially deleted in new
chr13	20403862	20525826	chr13:20403862-20525826	0	-	20406108	20525794	789624	9	380,107,225,106,195,162,127,108,73,	0,772,2041,9419,28239,35730,85507,108580,121891,
#Partially deleted in new
chr13	20426694	20489436	chr13:20426694-20489436	0	-	20427284	20489436	789624	4	611,195,162,67,	0,5407,12898,62675,
#Partially deleted in new
chr13	20431617	20439904	chr13:20431617-20439904	0	-	20431617	20431617	8553170	2	679,312,	0,7975,
#Deleted in new
chr13	20433777	20433846	chr13:20433777-20433846	3	-	20433777	20433777	5263520	1	69,	0,
#Partially deleted in new
chr13	20489476	20525857	chr13:20489476-20525857	0	-	20513672	20525794	789624	5	20,108,231,100,104,	0,22966,23974,26244,36277,
#Partially deleted in new
chr13	20567068	20691362	chr13:20567068-20691362	3	+	20574385	20691175	789624	26	188,96,63,57,54,64,70,91,105,103,115,229,71,87,100,87,187,109,151,116,53,66,107,67,111,309,	0,7311,15888,22742,23898,24549,25266,29081,29946,31582,32382,34636,37966,48724,58681,63947,71263,74221,76386,77774,86807,89296,96429,103904,123636,123985,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr13	20567137	20691437	chr13:20567137-20691437	1	+	20567976	20691175	789624	28	119,116,113,96,63,57,54,64,70,91,105,103,115,229,71,87,100,87,187,109,151,116,53,66,107,67,111,384,	0,532,747,7242,15819,22673,23829,24480,25197,29012,29877,31513,32313,34567,37897,48655,58612,63878,71194,74152,76317,77705,86738,89227,96360,103835,123567,123916,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	20567165	20583016	chr13:20567165-20583016	0	+	20574385	20583016	789624	4	91,328,96,60,	0,504,7214,15791,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr13	20597013	20642896	chr13:20597013-20642896	0	+	20597013	20641411	789624	11	106,103,115,44,83,71,87,100,87,187,1607,	0,1637,2437,4691,4837,8021,18779,28736,34002,41318,44276,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	20605055	20632139	chr13:20605055-20632139	0	+	20605055	20605055	8553170	5	50,79,87,100,1124,	0,9301,10737,20694,25960,
#Deleted in new
chr13	20607267	20608131	chr13:20607267-20608131	7	+	20607267	20607267	16724991	1	864,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	20612160	20612338	chr13:20612160-20612338	3	+	20612160	20612160	8553170	1	178,	0,
#Partially deleted in new
chr13	20615790	20691217	chr13:20615790-20691217	0	+	20615790	20615790	8553170	10	89,100,87,53,66,124,107,67,111,164,	0,9959,15225,38085,40574,47472,47707,55182,74914,75263,
#Partially deleted in new
chr13	20663264	20671039	chr13:20663264-20671039	0	+	20663264	20663264	8553170	2	340,67,	0,7708,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	20699306	20703718	chr13:20699306-20703718	3	-	20699306	20699306	8553170	1	4412,	0,
#Deleted in new
chr13	20702126	20704086	chr13:20702126-20704086	0	+	20703305	20704086	789624	2	1194,91,	0,1869,
#Partially deleted in new
chr13	20703342	20723098	chr13:20703342-20723098	3	+	20704001	20721954	789624	3	102,296,1463,	0,653,18293,
#Partially deleted in new
chr13	20704078	20721685	chr13:20704078-20721685	0	+	20704078	20717155	789624	3	213,272,50,	0,13019,17557,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	20712430	20714146	chr13:20712430-20714146	3	+	20712430	20712430	8553170	1	1716,	0,
#Partially deleted in new
chr13	20728730	20773949	chr13:20728730-20773949	3	-	20729079	20757598	789624	5	486,281,83,163,29,	0,3110,8992,28724,45190,
#Partially deleted in new
chr13	20728930	20773918	chr13:20728930-20773918	1	-	20729079	20757598	789624	5	286,281,83,163,62,	0,2910,8792,28524,44926,
#Partially deleted in new
chr13	20747034	20748057	chr13:20747034-20748057	7	-	20747034	20747034	16724991	2	421,292,	0,731,
#Partially deleted in new
chr13	20757228	20773958	chr13:20757228-20773958	0	-	20757228	20757228	8553170	2	389,38,	0,16692,
#Deleted in new
chr13	20768875	20769375	chr13:20768875-20769375	3	-	20768875	20768875	8553170	1	500,	0,
#Partially deleted in new
chr13	20777328	20902810	chr13:20777328-20902810	3	-	20783721	20902738	789624	23	6591,93,118,131,119,181,294,175,170,160,178,146,143,177,175,158,113,154,117,139,142,106,141,	0,9636,10152,11157,13133,18747,19435,21836,22827,23502,30128,31107,31754,32462,44375,44803,49738,65566,66441,78298,85388,91267,125341,
#Partially deleted in new
chr13	20777329	20902774	chr13:20777329-20902774	1	-	20783721	20902738	789624	23	6590,93,118,131,119,181,294,175,170,160,178,146,143,177,175,158,116,151,117,139,142,106,105,	0,9635,10151,11156,13132,18746,19434,21835,22826,23501,30127,31106,31753,32461,44374,44802,49737,65568,66440,78297,85387,91266,125340,
#Partially deleted in new
chr13	20855633	20903048	chr13:20855633-20903048	0	-	20855633	20855633	8553170	5	132,142,155,106,379,	0,7083,7335,12962,47036,
#Partially deleted in new
chr13	20868412	20902747	chr13:20868412-20902747	0	-	20868412	20868412	8553170	2	289,78,	0,34257,
#Partially deleted in new
chr13	20921663	20923233	chr13:20921663-20923233	7	-	20921663	20921663	16724991	2	865,334,	0,1236,
#Partially deleted in new
chr13	20938563	20949428	chr13:20938563-20949428	7	-	20938563	20938563	16724991	6	87,73,105,259,103,124,	0,1299,3577,3778,9188,10741,
#Partially deleted in new
chr13	20948293	20949599	chr13:20948293-20949599	5	-	20948293	20948293	16724991	2	672,325,	0,981,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	20956178	20956443	chr13:20956178-20956443	7	-	20956178	20956178	16724991	1	265,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	20961309	20962195	chr13:20961309-20962195	7	+	20961309	20961309	16724991	1	886,	0,
#Partially deleted in new
chr13	20973031	21061547	chr13:20973031-21061547	3	-	20974869	21046026	0	8	2333,107,183,583,1424,133,546,202,	0,6659,8434,10192,14849,18240,72653,88314,
#Partially deleted in new
chr13	20989009	21023129	chr13:20989009-21023129	0	-	20989009	20989009	8553170	3	295,133,67,	0,2262,34053,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	21005156	21018122	chr13:21005156-21018122	3	+	21005156	21005156	8553170	2	545,87,	0,12879,
#Deleted in new
chr13	21094314	21094714	chr13:21094314-21094714	7	-	21094314	21094314	16724991	1	400,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	21103002	21104371	chr13:21103002-21104371	7	-	21103002	21103002	16724991	3	304,187,277,	0,579,1092,
#Partially deleted in new
chr13	21126270	21126396	chr13:21126270-21126396	3	-	21126270	21126270	8553170	1	126,	0,
#Partially deleted in new
chr13	21139885	21139957	chr13:21139885-21139957	3	-	21139885	21139885	8553170	1	72,	0,
#Partially deleted in new
chr13	21140513	21149082	chr13:21140513-21149082	1	+	21140552	21147342	789624	4	168,110,123,1897,	0,372,6291,6672,
#Partially deleted in new
chr13	21140513	21149084	chr13:21140513-21149084	3	+	21140552	21147342	789624	4	168,110,123,1899,	0,372,6291,6672,
#Partially deleted in new
chr13	21140577	21149082	chr13:21140577-21149082	1	+	21140609	21147342	0	4	104,110,123,1897,	0,308,6227,6608,
#Partially deleted in new
chr13	21140611	21141619	chr13:21140611-21141619	0	+	21140611	21140611	8553170	2	70,734,	0,274,
#Partially deleted in new
chr13	21140614	21147413	chr13:21140614-21147413	0	+	21140614	21147186	789624	3	67,110,228,	0,271,6571,
#Partially deleted in new
chr13	21140773	21147319	chr13:21140773-21147319	0	+	21140822	21147319	789624	3	222,123,134,	0,6031,6412,
#Partially deleted in new
chr13	21140885	21147603	chr13:21140885-21147603	0	+	21140885	21147170	789624	3	110,123,437,	0,5919,6281,
#Deleted in new
chr13	21146463	21147391	chr13:21146463-21147391	0	+	21146463	21146463	8553170	2	464,206,	0,722,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	21153594	21176548	chr13:21153594-21176548	0	-	21172499	21176477	0	8	1556,119,204,86,86,412,166,174,	0,2098,4327,6307,8195,14393,18744,22780,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr13	21153594	21176602	chr13:21153594-21176602	3	-	21155149	21176477	0	9	1556,119,204,86,86,412,166,62,228,	0,2098,4327,6307,8195,14393,18744,19025,22780,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	21153594	21176547	chr13:21153594-21176547	1	-	21155102	21176477	0	8	1556,204,86,86,412,166,62,173,	0,4327,6307,8195,14393,18744,19025,22780,
#Partially deleted in new
chr13	21154696	21176551	chr13:21154696-21176551	0	-	21155764	21176477	789624	3	454,119,177,	0,996,21678,
#Partially deleted in new
chr13	21161789	21176551	chr13:21161789-21176551	0	-	21176366	21176477	789624	5	86,412,166,62,204,	0,6198,10549,10830,14558,
#Partially deleted in new
chr13	21168221	21172713	chr13:21168221-21172713	0	-	21168221	21168221	8553170	3	178,166,94,	0,4117,4398,
#Partially deleted in new
chr13	21172268	21176473	chr13:21172268-21176473	0	-	21172268	21172268	8553170	3	236,62,99,	0,351,4106,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	21176644	21179084	chr13:21176644-21179084	3	+	21176916	21177225	0	2	73,2173,	0,267,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	21216554	21216660	chr13:21216554-21216660	7	+	21216554	21216554	16724991	1	106,	0,
#Deleted in new
chr13	21234567	21235204	chr13:21234567-21235204	3	+	21234567	21234567	789624	2	86,319,	0,318,
#Partially deleted in new
chr13	21260014	21269085	chr13:21260014-21269085	7	+	21260014	21260014	16724991	3	75,102,103,	0,2458,8968,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	21260028	21293429	chr13:21260028-21293429	4	+	21260028	21260028	16724991	7	61,102,54,54,170,163,17,	0,2444,18020,20240,31345,32652,33384,
#Partially deleted in new
chr13	21260031	21261580	chr13:21260031-21261580	5	+	21260031	21260031	16724991	1	1549,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	21287405	21295003	chr13:21287405-21295003	5	+	21287405	21287405	16724991	2	551,271,	0,7327,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	21287619	21292839	chr13:21287619-21292839	4	+	21287619	21287619	16724991	3	272,170,159,	0,3754,5061,
#Deleted in new
chr13	21287633	21287828	chr13:21287633-21287828	7	-	21287633	21287633	16724991	1	195,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	21298138	21304555	chr13:21298138-21304555	5	+	21298138	21298138	16724991	3	58,200,89,	0,3280,6328,
#Partially deleted in new
chr13	21298258	21306373	chr13:21298258-21306373	7	+	21298258	21298258	16724991	4	181,37,137,89,	0,3160,3223,8026,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	21303514	21348721	chr13:21303514-21348721	3	-	21303514	21303514	8553170	7	306,77,104,85,121,228,39,	0,7527,8937,27059,41151,43797,45168,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	21311041	21348721	chr13:21311041-21348721	1	-	21311041	21311041	8553170	7	77,215,104,85,121,228,39,	0,1109,1410,19532,33624,36270,37641,
#Partially deleted in new
chr13	21319155	21320866	chr13:21319155-21320866	7	+	21319155	21319155	16724991	1	1711,	0,
#Partially deleted in new
chr13	21323268	21344845	chr13:21323268-21344845	1	-	21323268	21323268	8553170	3	434,85,180,	0,7305,21397,
#Partially deleted in new
chr13	21325624	21348721	chr13:21325624-21348721	0	-	21325624	21325624	8553170	5	191,85,121,228,39,	0,4949,19041,21687,23058,
#Deleted in new
chr13	21358372	21359314	chr13:21358372-21359314	7	+	21358372	21358372	16724991	1	942,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	21369789	21369899	chr13:21369789-21369899	7	-	21369789	21369789	16724991	1	110,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr13	21372572	21459369	chr13:21372572-21459369	1	-	21376647	21459171	0	12	4083,113,90,127,133,121,33,70,121,104,27,316,	0,8861,10347,14935,19149,27800,29080,30224,41079,48488,53079,86481,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr13	21372572	21459370	chr13:21372572-21459370	1	-	21376647	21421120	789624	11	4083,116,90,127,133,121,33,70,121,104,317,	0,8861,10347,14935,19149,27800,29080,30224,41079,48488,86481,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	21372576	21381455	chr13:21372576-21381455	0	-	21378700	21381455	789624	4	1694,1549,78,22,	0,2530,6084,8857,
#Partially deleted in new
chr13	21376123	21459370	chr13:21376123-21459370	3	-	21378700	21459171	0	13	532,78,116,90,127,133,121,33,70,121,104,27,317,	0,2537,5310,6796,11384,15598,24249,25529,26673,37528,44937,49528,82930,
#Partially deleted in new
chr13	21376346	21387557	chr13:21376346-21387557	0	-	21376346	21376346	8553170	4	309,113,90,50,	0,5087,6573,11161,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr13	21376486	21459248	chr13:21376486-21459248	1	-	21381926	21459171	0	13	169,116,45,90,127,133,121,33,70,121,104,27,195,	0,4947,5414,6433,11021,15235,23886,25166,26310,37165,44574,49165,82567,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	21376514	21390254	chr13:21376514-21390254	0	-	21376514	21376514	8553170	6	141,116,45,90,127,60,	0,4919,5386,6405,10993,13680,
#Partially deleted in new
chr13	21376518	21421107	chr13:21376518-21421107	0	-	21376518	21376518	8553170	10	137,116,90,127,133,121,33,70,121,47,	0,4915,6401,10989,15203,23854,25134,26278,37133,44542,
#Deleted in new
chr13	21376976	21377874	chr13:21376976-21377874	3	-	21376976	21376976	8553170	2	232,208,	0,690,
#Partially deleted in new
chr13	21378700	21459369	chr13:21378700-21459369	1	-	21378700	21459171	0	12	38,116,90,127,133,121,33,70,121,104,27,316,	0,2733,4219,8807,13021,21672,22952,24096,34951,42360,46951,80353,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	21381433	21381994	chr13:21381433-21381994	0	-	21381433	21381433	8553170	2	116,94,	0,467,
#Deleted in new
chr13	21483833	21484174	chr13:21483833-21484174	7	-	21483833	21483833	16724991	1	341,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	21492690	21503073	chr13:21492690-21503073	0	-	21492690	21492690	8553170	3	663,1000,148,	0,2470,10235,
#Partially deleted in new
chr13	21492699	21604214	chr13:21492699-21604214	3	-	21493248	21604148	789624	12	654,158,109,172,98,66,83,48,76,32,148,276,	0,2461,3352,10226,17304,21653,28545,29903,46602,46957,74097,111239,
#Partially deleted in new
chr13	21492936	21503098	chr13:21492936-21503098	0	-	21492936	21492936	8553170	3	417,158,173,	0,2224,9989,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	21493103	21496652	chr13:21493103-21496652	0	-	21493103	21493103	8553170	3	250,158,601,	0,2057,2948,
#Partially deleted in new
chr13	21502826	21515661	chr13:21502826-21515661	0	-	21502826	21502826	8553170	4	271,98,66,128,	0,7177,11526,12707,
#Partially deleted in new
chr13	21510026	21604165	chr13:21510026-21604165	0	-	21510026	21510026	8553170	9	75,66,83,48,76,32,148,75,227,	0,4326,11218,12576,29275,29630,56770,92717,93912,
#Partially deleted in new
chr13	21510082	21604181	chr13:21510082-21604181	0	-	21510082	21604148	789624	9	19,66,27,83,48,76,32,148,243,	0,4270,5451,11162,12520,29219,29574,56714,93856,
#Deleted in new
chr13	21530689	21531323	chr13:21530689-21531323	7	+	21530689	21530689	16724991	1	634,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	21551303	21551410	chr13:21551303-21551410	3	-	21551303	21551303	8553170	1	107,	0,
#Deleted in new
chr13	21628412	21629015	chr13:21628412-21629015	7	-	21628412	21628412	16724991	1	603,	0,
#Partially deleted in new
chr13	21671382	21704498	chr13:21671382-21704498	3	+	21671912	21701435	0	3	807,104,3309,	0,9659,29807,
#Partially deleted in new
chr13	21674001	21701298	chr13:21674001-21701298	0	+	21674001	21674001	8553170	3	211,104,109,	0,7040,27188,
#Partially deleted in new
chr13	21681112	21701832	chr13:21681112-21701832	0	+	21681112	21681112	8553170	2	141,643,	0,20077,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	21790536	21790845	chr13:21790536-21790845	3	+	21790536	21790536	8553170	1	309,	0,
#Deleted in new
chr13	21872769	21875566	chr13:21872769-21875566	3	-	21872769	21872769	8553170	2	453,201,	0,2596,
#Partially deleted in new
chr13	21872795	21878160	chr13:21872795-21878160	0	-	21872795	21872795	789624	2	427,26,	0,5339,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	22040974	22276524	chr13:22040974-22276524	3	+	22040974	22040974	8553170	2	410,2002,	0,233548,
#Deleted in new
chr13	22099162	22099544	chr13:22099162-22099544	7	-	22099162	22099162	16724991	1	382,	0,
#Partially deleted in new
chr13	22107469	22274945	chr13:22107469-22274945	0	+	22107469	22107469	8553170	2	165,423,	0,167053,
#Deleted in new
chr13	22113118	22113338	chr13:22113118-22113338	7	-	22113118	22113118	16724991	1	220,	0,
#Partially deleted in new
chr13	22210284	22276521	chr13:22210284-22276521	0	+	22210284	22210284	789624	2	144,1999,	0,64238,
#Deleted in new
chr13	22696022	22696574	chr13:22696022-22696574	7	-	22696022	22696022	16724991	1	552,	0,
#Deleted in new
chr13	22704738	22706206	chr13:22704738-22706206	7	-	22704738	22704738	16724991	2	214,967,	0,501,
#Partially deleted in new
chr13	22803144	22803224	chr13:22803144-22803224	3	+	22803144	22803144	8553170	1	80,	0,
#Partially deleted in new
chr13	22803295	22803648	chr13:22803295-22803648	7	+	22803295	22803295	16724991	1	353,	0,
#Deleted in new
chr13	22837025	22837880	chr13:22837025-22837880	7	-	22837025	22837025	16724991	1	855,	0,
#Deleted in new
chr13	22850100	22850561	chr13:22850100-22850561	7	+	22850100	22850100	16724991	1	461,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	22894655	22916369	chr13:22894655-22916369	3	-	22894655	22894655	8553170	3	383,142,652,	0,1705,21062,
#Deleted in new
chr13	22897340	22898005	chr13:22897340-22898005	7	-	22897340	22897340	16724991	1	665,	0,
#Deleted in new
chr13	22915650	22916523	chr13:22915650-22916523	7	+	22915650	22915650	16724991	1	873,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	22918590	22924602	chr13:22918590-22924602	3	+	22918590	22918590	8553170	2	86,499,	0,5513,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	22931536	22931999	chr13:22931536-22931999	3	+	22931536	22931536	8553170	1	463,	0,
#Deleted in new
chr13	23134173	23134564	chr13:23134173-23134564	7	+	23134173	23134173	16724991	1	391,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	23152585	23152686	chr13:23152585-23152686	3	-	23152585	23152585	8553170	1	101,	0,
#Deleted in new
chr13	23169834	23170597	chr13:23169834-23170597	3	-	23169834	23169834	8553170	2	218,46,	0,717,
#Partially deleted in new
chr13	23180951	23325165	chr13:23180951-23325165	3	+	23203694	23324541	789624	8	124,195,102,88,120,73,124,798,	0,22743,53659,69678,98407,114463,139685,143416,
#Deleted in new
chr13	23217431	23217534	chr13:23217431-23217534	3	-	23217431	23217431	8553170	1	103,	0,
#Deleted in new
chr13	23243519	23247184	chr13:23243519-23247184	7	+	23243519	23243519	16724991	1	3665,	0,
#Deleted in new
chr13	23267505	23269150	chr13:23267505-23269150	7	+	23267505	23267505	16724991	1	1645,	0,
#Partially deleted in new
chr13	23328825	23433728	chr13:23328825-23433728	3	-	23330135	23411239	0	10	12865,92,1489,147,112,86,88,151,521,114,	0,24959,25693,29509,36340,39576,42252,46293,82394,104789,
#Partially deleted in new
chr13	23328825	23375543	chr13:23328825-23375543	1	-	23330135	23341625	0	8	12865,92,1489,147,112,86,151,192,	0,24959,25693,29509,36340,39576,46293,46526,
#Partially deleted in new
chr13	23328829	23433701	chr13:23328829-23433701	1	-	23329416	23411239	789624	11	655,246,92,1489,147,112,86,88,151,521,87,	0,12615,24955,25689,29505,36336,39572,42248,46289,82390,104785,
#Partially deleted in new
chr13	23328832	23433740	chr13:23328832-23433740	1	-	23329416	23411239	789624	10	652,92,1489,147,112,86,88,151,521,126,	0,24952,25686,29502,36333,39569,42245,46286,82387,104782,
#Deleted in new
chr13	23353735	23354890	chr13:23353735-23354890	0	-	23353735	23353735	8553170	2	141,372,	0,783,
#Partially deleted in new
chr13	23373422	23374061	chr13:23373422-23374061	7	+	23373422	23373422	16724991	2	66,233,	0,406,
#Partially deleted in new
chr13	23418970	23428869	chr13:23418970-23428869	3	+	23418970	23418970	789624	2	331,1903,	0,7996,
#Deleted in new
chr13	23466570	23470642	chr13:23466570-23470642	0	+	23466570	23466570	8553170	2	593,129,	0,3943,
#Deleted in new
chr13	23466570	23470642	chr13:23466570-23470642	1	+	23466570	23466570	8553170	2	1179,129,	0,3943,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	23469511	23487464	chr13:23469511-23487464	3	+	23469511	23469511	789624	3	680,177,1230,	0,1002,16723,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	23498795	23502874	chr13:23498795-23502874	3	+	23498795	23498795	8553170	2	47,505,	0,3574,
#Partially deleted in new
chr13	23570369	23674889	chr13:23570369-23674889	1	+	23590183	23673380	789624	10	479,103,111,179,86,165,126,103,406,1518,	0,19780,22975,45497,56337,88680,89995,97610,98322,103002,
#Partially deleted in new
chr13	23570369	23676104	chr13:23570369-23676104	1	+	23626743	23673380	789624	8	479,179,86,165,126,103,406,2733,	0,45497,56337,88680,89995,97610,98322,103002,
#Partially deleted in new
chr13	23579359	23669273	chr13:23579359-23669273	3	+	23590183	23669124	789624	9	170,103,111,179,86,165,126,103,582,	0,10790,13985,36507,47347,79690,81005,88620,89332,
#Partially deleted in new
chr13	23579379	23676093	chr13:23579379-23676093	1	+	23590183	23673380	789624	10	150,103,111,179,86,165,126,103,406,2722,	0,10770,13965,36487,47327,79670,80985,88600,89312,93992,
#Partially deleted in new
chr13	23730188	23889419	chr13:23730188-23889419	3	-	23730347	23889320	789624	19	257,74,122,120,75,110,205,78,154,53,61,49,157,183,64,87,89,174,288,	0,26356,29907,75761,79661,106051,107363,109460,111146,128671,132113,133952,139103,139824,144657,149079,151510,156144,158943,
#Partially deleted in new
chr13	23730188	23760573	chr13:23730188-23760573	0	-	23730188	23730188	8553170	4	257,74,122,41,	0,26356,29907,30344,
#Partially deleted in new
chr13	23730188	23756830	chr13:23730188-23756830	0	-	23730188	23730188	8553170	2	257,286,	0,26356,
#Deleted in new
chr13	23765933	23766104	chr13:23765933-23766104	7	-	23765933	23765933	16724991	1	171,	0,
#Partially deleted in new
chr13	23842269	23870195	chr13:23842269-23870195	0	-	23842269	23842269	8553170	6	300,53,61,49,157,183,	0,16590,20032,21871,27022,27743,
#Partially deleted in new
chr13	23881698	23889398	chr13:23881698-23889398	0	-	23881698	23881698	8553170	3	89,174,721,	0,4634,6979,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	23888888	23892104	chr13:23888888-23892104	3	+	23888888	23888888	8553170	4	123,43,147,492,	0,1111,2496,2724,
#Partially deleted in new
chr13	23890524	23902655	chr13:23890524-23902655	3	-	23891288	23896986	789624	4	1537,63,186,39,	0,3614,6296,12092,
#Partially deleted in new
chr13	23891098	23897006	chr13:23891098-23897006	1	-	23891288	23896986	789624	3	963,63,186,	0,3040,5722,
#Partially deleted in new
chr13	23891248	23897055	chr13:23891248-23897055	0	-	23891248	23891248	8553170	5	263,36,63,132,235,	0,777,2890,3262,5572,
#Deleted in new
chr13	23891384	23892007	chr13:23891384-23892007	0	+	23891384	23891384	8553170	2	147,395,	0,228,
#Partially deleted in new
chr13	23891458	23897263	chr13:23891458-23897263	0	+	23891458	23891458	8553170	2	73,395,	0,5410,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	23939556	23946782	chr13:23939556-23946782	7	-	23939556	23939556	16724991	4	1468,180,115,1033,	0,1733,2069,6193,
#Partially deleted in new
chr13	23940968	23946224	chr13:23940968-23946224	4	-	23940968	23940968	16724991	5	56,180,115,231,59,	0,321,657,4781,5197,
#Deleted in new
chr13	23941289	23941740	chr13:23941289-23941740	5	-	23941289	23941289	16724991	2	180,115,	0,336,
#Partially deleted in new
chr13	23979699	24321031	chr13:23979699-24321031	3	+	24222929	24316007	789624	16	225,207,35,1764,145,137,180,186,180,233,130,373,75,188,63,36,	0,4027,37967,243119,272018,304435,306514,307065,309299,310952,315039,317663,320701,336282,339118,341296,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr13	23979804	24307069	chr13:23979804-24307069	1	+	24222929	24302773	789624	15	120,207,35,1764,366,145,137,180,186,180,233,130,373,75,4472,	0,3922,37862,243014,269672,271913,304330,306409,306960,309194,310847,314934,317558,320596,322793,
#Partially deleted in new
chr13	23979809	24035027	chr13:23979809-24035027	3	+	23979809	23979809	789624	5	115,207,35,257,1107,	0,3917,37857,53703,54111,
#Deleted in new
chr13	24122064	24123814	chr13:24122064-24123814	7	-	24122064	24122064	16724991	1	1750,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr13	24160715	24307074	chr13:24160715-24307074	1	+	24222929	24302773	789624	13	217,1764,366,145,137,180,186,180,233,130,373,75,4477,	0,62103,88761,91002,123419,125498,126049,128283,129936,134023,136647,139685,141882,
#Partially deleted in new
chr13	24160721	24224798	chr13:24160721-24224798	0	+	24160721	24160721	8553170	2	211,1980,	0,62097,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr13	24160747	24307072	chr13:24160747-24307072	3	+	24249698	24302773	789624	12	185,366,145,137,180,186,180,233,130,373,75,4475,	0,88729,90970,123387,125466,126017,128251,129904,133991,136615,139653,141850,
#Deleted in new
chr13	24162415	24162504	chr13:24162415-24162504	3	+	24162415	24162415	5263520	1	89,	0,
#Partially deleted in new
chr13	24224240	24249663	chr13:24224240-24249663	0	+	24224240	24224240	8553170	2	342,187,	0,25236,
#Partially deleted in new
chr13	24251693	24303121	chr13:24251693-24303121	0	+	24251693	24302773	789624	9	169,137,180,180,233,130,373,75,524,	0,32441,34520,37305,38958,43045,45669,48707,50904,
#Partially deleted in new
chr13	24251717	24278769	chr13:24251717-24278769	0	+	24278700	24278769	789624	2	145,156,	0,26896,
#Deleted in new
chr13	24252748	24254439	chr13:24252748-24254439	3	-	24252748	24252748	5263520	3	208,121,104,	0,330,1587,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr13	24270686	24307074	chr13:24270686-24307074	1	+	24278700	24302773	789624	11	226,208,137,180,186,180,233,130,373,75,4477,	0,7927,13448,15527,16078,18312,19965,24052,26676,29714,31911,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr13	24270687	24303904	chr13:24270687-24303904	1	+	24270857	24302773	789624	10	225,137,180,186,180,233,130,373,75,1307,	0,13447,15526,16077,18311,19964,24051,26675,29713,31910,
#Partially deleted in new
chr13	24270718	24303206	chr13:24270718-24303206	1	+	24270857	24302773	789624	9	194,137,180,180,233,130,373,75,609,	0,13416,15495,18280,19933,24020,26644,29682,31879,
#Partially deleted in new
chr13	24270840	24286393	chr13:24270840-24286393	0	+	24278700	24286393	789624	4	72,208,137,180,	0,7773,13294,15373,
#Partially deleted in new
chr13	24272688	24278769	chr13:24272688-24278769	0	+	24278700	24278769	789624	2	449,156,	0,5925,
#Partially deleted in new
chr13	24307165	24322535	chr13:24307165-24322535	3	+	24316003	24321768	789624	4	63,188,63,1540,	0,8816,11652,13830,
#Partially deleted in new
chr13	24309577	24322535	chr13:24309577-24322535	1	+	24316003	24321768	789624	4	39,188,63,1540,	0,6404,9240,11418,
#Partially deleted in new
chr13	24315724	24321598	chr13:24315724-24321598	3	-	24315724	24315724	8553170	2	397,73,	0,5801,
#Deleted in new
chr13	24323020	24323457	chr13:24323020-24323457	7	+	24323020	24323020	16724991	1	437,	0,
#Deleted in new
chr13	24328210	24329072	chr13:24328210-24329072	7	+	24328210	24328210	16724991	1	862,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	24331449	24337121	chr13:24331449-24337121	3	+	24331449	24331449	789624	2	87,483,	0,5189,
#Partially deleted in new
chr13	24400702	24401029	chr13:24400702-24401029	7	+	24400702	24400702	16724991	1	327,	0,
#Partially deleted in new
chr13	24408156	24597660	chr13:24408156-24597660	7	+	24408156	24408156	16724991	10	66,78,89,62,81,101,92,93,71,274,	0,879,1059,173504,175345,179069,181099,186114,187632,189230,
#Partially deleted in new
chr13	24420925	24512810	chr13:24420925-24512810	3	-	24421118	24503776	789624	34	389,133,100,1080,123,96,81,81,171,100,188,68,196,138,79,47,165,87,132,125,157,184,96,138,161,174,138,150,114,76,67,202,133,105,	0,5540,10451,13469,20920,21664,22724,25755,26090,28792,31480,32661,34091,35415,38118,38338,39046,48098,48968,54546,56775,57167,63727,65242,69742,71495,72670,73647,77190,78375,79390,80707,82719,91780,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	24451971	24455134	chr13:24451971-24455134	0	-	24451971	24451971	8553170	3	622,68,118,	0,1615,3045,
#Partially deleted in new
chr13	24456396	24459482	chr13:24456396-24459482	0	-	24456396	24456396	8553170	3	82,79,219,	0,2647,2867,
#Partially deleted in new
chr13	24566842	24570728	chr13:24566842-24570728	7	+	24566842	24566842	16724991	2	56,169,	0,3717,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr13	24566872	24597676	chr13:24566872-24597676	3	+	24566872	24566872	8553170	13	28,113,100,170,62,81,333,101,92,93,71,176,290,	0,411,2337,3690,14788,16629,19589,20353,22383,27398,28916,30229,30514,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	24586003	24597676	chr13:24586003-24597676	5	+	24586003	24586003	16724991	4	791,101,93,290,	0,1222,8267,11383,
#Partially deleted in new
chr13	24587223	24597676	chr13:24587223-24597676	5	+	24587223	24587223	16724991	5	103,92,93,71,290,	0,2032,7047,8565,10163,
#Deleted in new
chr13	24611965	24613983	chr13:24611965-24613983	7	+	24611965	24611965	16724991	2	132,181,	0,1837,
#Partially deleted in new
chr13	24680410	24711783	chr13:24680410-24711783	1	+	24680743	24711522	789624	23	342,159,60,204,114,135,118,287,199,110,135,193,176,137,151,169,155,124,146,134,102,92,290,	0,1151,4903,7908,8851,9927,10193,10553,12018,12376,14033,18247,20336,21524,25902,26612,26868,28953,29272,30049,30381,30907,31083,
#Partially deleted in new
chr13	24680576	24712493	chr13:24680576-24712493	3	+	24680743	24711522	789624	23	176,159,60,204,114,135,118,269,199,110,135,193,176,137,151,169,155,124,146,134,102,92,1000,	0,985,4737,7742,8685,9761,10027,10405,11852,12210,13867,18081,20170,21358,25736,26446,26702,28787,29106,29883,30215,30741,30917,
#Deleted in new
chr13	24704337	24704788	chr13:24704337-24704788	7	-	24704337	24704337	16724991	1	451,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	24723100	24738690	chr13:24723100-24738690	3	-	24723100	24723100	8553170	3	396,279,234,	0,13123,15356,
#Deleted in new
chr13	24742676	24746184	chr13:24742676-24746184	7	+	24742676	24742676	16724991	5	552,220,62,86,918,	0,1254,1670,1999,2590,
#Deleted in new
chr13	24750656	24752171	chr13:24750656-24752171	7	-	24750656	24750656	16724991	1	1515,	0,
#Partially deleted in new
chr13	24764151	24879921	chr13:24764151-24879921	3	+	24764203	24879285	0	36	182,95,92,112,81,101,172,77,75,305,159,190,169,191,142,154,116,121,121,228,151,119,103,116,290,164,120,81,126,60,117,169,136,190,109,185,	0,3120,10661,14143,15515,17692,23836,25196,25546,28890,31985,35243,36214,38229,40136,61467,66332,67706,77889,79592,80500,80809,86189,87304,89703,94849,97116,98561,100721,101992,104448,106419,109962,112845,115035,115585,
#Partially deleted in new
chr13	24764200	24824377	chr13:24764200-24824377	1	+	24764203	24824208	0	15	133,95,92,112,81,101,172,77,75,305,159,190,169,191,182,	0,3071,10612,14094,15466,17643,23787,25147,25497,28841,31936,35194,36165,38180,59995,
#Partially deleted in new
chr13	24764200	24796242	chr13:24764200-24796242	0	+	24764200	24764200	8553170	12	133,95,92,112,81,101,172,77,75,305,141,106,	0,3071,10612,14094,15466,17643,23787,25147,25497,28841,29954,31936,
#Partially deleted in new
chr13	24803733	24874261	chr13:24803733-24874261	0	+	24804366	24874261	789624	20	180,142,154,116,121,121,228,151,119,103,116,290,164,120,81,126,60,117,169,148,	0,554,21885,26750,28124,38307,40010,40918,41227,46607,47722,50121,55267,57534,58979,61139,62410,64866,66837,70380,
#Partially deleted in new
chr13	24843878	24879921	chr13:24843878-24879921	1	+	24844664	24879285	789624	16	93,151,119,103,116,290,164,120,81,60,117,169,136,190,109,185,	0,773,1082,6462,7577,9976,15122,17389,18834,22265,24721,26692,30235,33118,35308,35858,
#Partially deleted in new
chr13	24882283	24922889	chr13:24882283-24922889	1	-	24885625	24913025	0	16	1086,121,85,141,111,65,225,166,133,1615,103,109,297,124,510,129,	0,1679,1877,2039,2992,3322,10359,17135,21642,23062,24807,25734,27506,29662,30298,40477,
#Partially deleted in new
chr13	24883032	24922880	chr13:24883032-24922880	3	-	24883176	24913025	0	17	337,121,85,141,111,65,85,225,166,133,1615,103,109,297,124,510,120,	0,930,1128,1290,2243,2573,6283,9610,16386,20893,22313,24058,24985,26757,28913,29549,39728,
#Partially deleted in new
chr13	24883162	24922810	chr13:24883162-24922810	1	-	24886275	24913025	789624	18	207,121,85,141,111,65,152,85,225,166,133,1615,103,109,297,124,510,50,	0,800,998,1160,2113,2443,3071,6153,9480,16256,20763,22183,23928,24855,26627,28783,29419,39598,
#Partially deleted in new
chr13	24884329	24889355	chr13:24884329-24889355	0	-	24884329	24884329	8553170	5	134,111,65,151,40,	0,946,1276,1905,4986,
#Deleted in new
chr13	24885289	24886079	chr13:24885289-24886079	0	-	24885289	24885289	8553170	2	97,474,	0,316,
#Partially deleted in new
chr13	24889169	24903994	chr13:24889169-24903994	0	-	24889271	24903994	789624	4	231,225,166,69,	0,3473,10249,14756,
#Partially deleted in new
chr13	24933005	24936796	chr13:24933005-24936796	7	+	24933005	24933005	16724991	2	130,199,	0,3592,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr13	24933005	24968453	chr13:24933005-24968453	4	-	24933005	24933005	16724991	10	1658,194,279,122,90,92,176,101,62,248,	0,4571,7501,8981,9926,18391,18589,28743,34386,35200,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	24940601	24968487	chr13:24940601-24968487	5	-	24940601	24940601	16724991	5	184,122,90,92,282,	0,1385,2330,10795,27604,
#Deleted in new
chr13	24943574	24944498	chr13:24943574-24944498	7	+	24943574	24943574	16724991	2	167,123,	0,801,
#Partially deleted in new
chr13	24951387	24967454	chr13:24951387-24967454	5	-	24951387	24951387	16724991	7	103,64,97,79,106,81,63,	0,1893,3385,8346,10361,14112,16004,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	24967241	24968455	chr13:24967241-24968455	4	-	24967241	24967241	16724991	2	212,250,	0,964,
#Deleted in new
chr13	24988576	24988925	chr13:24988576-24988925	7	-	24988576	24988576	16724991	1	349,	0,
#Deleted in new
chr13	25017403	25017536	chr13:25017403-25017536	7	+	25017403	25017403	16724991	1	133,	0,
#Deleted in new
chr13	25017765	25017903	chr13:25017765-25017903	7	-	25017765	25017765	16724991	1	138,	0,
#Deleted in new
chr13	25095867	25099254	chr13:25095867-25099254	3	+	25096198	25098094	0	1	3387,	0,
#Deleted in new
chr13	25141535	25141809	chr13:25141535-25141809	3	+	25141535	25141535	8553170	1	274,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	25161683	25172288	chr13:25161683-25172288	1	-	25169603	25171619	789624	3	8798,881,376,	0,9155,10229,
#Deleted in new
chr13	25169090	25172287	chr13:25169090-25172287	3	-	25169603	25171619	789624	1	3197,	0,
#Partially deleted in new
chr13	25172827	25180079	chr13:25172827-25180079	3	-	25172827	25172827	789624	4	495,175,174,303,	0,1085,3848,6949,
#Partially deleted in new
chr13	25181440	25189760	chr13:25181440-25189760	3	+	25181440	25181440	8553170	3	93,176,502,	0,5083,7818,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	25190062	25190317	chr13:25190062-25190317	3	-	25190062	25190062	8553170	1	255,	0,
#Partially deleted in new
chr13	25193106	25210295	chr13:25193106-25210295	3	-	25193106	25193106	8553170	2	107,195,	0,16994,
#Deleted in new
chr13	25206048	25206506	chr13:25206048-25206506	7	+	25206048	25206048	16724991	1	458,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr13	25246200	25288009	chr13:25246200-25288009	3	-	25249231	25287247	0	14	3292,127,132,201,50,126,110,133,135,129,158,163,117,786,	0,5448,5652,7563,8184,10995,11535,12359,15467,19618,19928,21578,27870,41023,
#Partially deleted in new
chr13	25258620	25261808	chr13:25258620-25261808	0	-	25258620	25258620	8553170	3	72,114,141,	0,1953,3047,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	25300123	25301438	chr13:25300123-25301438	3	-	25300123	25300123	8553170	1	1315,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr13	25301523	25342416	chr13:25301523-25342416	1	+	25301773	25340134	0	16	357,143,36,150,138,111,25,66,175,80,119,83,202,99,96,2452,	0,6282,7723,11359,12090,13833,17802,19006,19395,23465,25392,25906,29833,35412,37112,38441,
#Partially deleted in new
chr13	25301555	25307949	chr13:25301555-25307949	0	+	25301773	25303008	789624	4	325,82,54,144,	0,1371,1546,6250,
#Partially deleted in new
chr13	25301624	25309429	chr13:25301624-25309429	0	+	25301624	25301624	8553170	3	256,143,183,	0,6181,7622,
#Partially deleted in new
chr13	25301624	25312942	chr13:25301624-25312942	0	+	25301773	25312927	789624	5	256,143,36,56,60,	0,6181,7622,8335,11258,
#Partially deleted in new
chr13	25301624	25308137	chr13:25301624-25308137	0	+	25301624	25301624	8553170	2	256,332,	0,6181,
#Partially deleted in new
chr13	25301624	25312956	chr13:25301624-25312956	0	+	25301773	25303105	789624	5	256,54,143,36,74,	0,1477,6181,7622,11258,
#Partially deleted in new
chr13	25301630	25336340	chr13:25301630-25336340	1	+	25301773	25331581	0	13	250,143,36,150,138,111,25,66,175,80,119,83,4984,	0,6175,7616,11252,11983,13726,17695,18899,19288,23358,25285,25799,29726,
#Partially deleted in new
chr13	25301630	25338878	chr13:25301630-25338878	0	+	25301630	25301630	8553170	14	250,143,36,150,138,111,25,175,80,119,83,202,99,243,	0,6175,7616,11252,11983,13726,17695,19288,23358,25285,25799,29726,35305,37005,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr13	25301632	25340718	chr13:25301632-25340718	3	+	25301773	25340134	0	15	248,143,150,138,111,25,66,175,80,119,83,202,99,96,754,	0,6173,11250,11981,13724,17693,18897,19286,23356,25283,25797,29724,35303,37003,38332,
#Partially deleted in new
chr13	25301644	25317823	chr13:25301644-25317823	0	+	25301644	25301644	8553170	7	236,143,36,150,138,111,133,	0,6161,7602,11238,11969,13712,16046,
#Partially deleted in new
chr13	25301646	25336309	chr13:25301646-25336309	0	+	25301773	25336309	789624	14	234,143,36,150,138,111,25,66,175,80,119,83,202,97,	0,6159,7600,11236,11967,13710,17679,18883,19272,23342,25269,25783,29710,34566,
#Partially deleted in new
chr13	25307821	25336344	chr13:25307821-25336344	0	+	25307821	25336328	789624	12	127,150,138,111,25,66,175,80,119,83,202,132,	0,5061,5792,7535,11504,12708,13097,17167,19094,19608,23535,28391,
#Partially deleted in new
chr13	25320272	25325054	chr13:25320272-25325054	0	+	25320272	25320272	8553170	3	323,175,66,	0,646,4716,
#Partially deleted in new
chr13	25331432	25349800	chr13:25331432-25349800	0	+	25331432	25331432	8553170	4	126,99,96,239,	0,5503,7203,18129,
#Deleted in new
chr13	25365798	25366155	chr13:25365798-25366155	7	-	25365798	25365798	16724991	1	357,	0,
#Partially deleted in new
chr13	25372070	26025851	chr13:25372070-26025851	3	+	25372212	26019985	789624	37	218,145,100,99,46,41,74,70,128,112,166,128,78,89,45,76,106,83,50,70,85,140,139,65,173,184,111,75,123,79,62,57,108,89,105,92,5964,	0,96906,157928,158491,160201,161202,165917,168248,169848,171220,179267,181722,182920,186902,187650,191885,198696,199539,202737,204998,206744,207737,209748,217564,327102,396975,402778,456047,465092,467475,488124,488733,490230,589504,596504,640460,647817,
#Partially deleted in new
chr13	25468976	25534225	chr13:25468976-25534225	0	+	25468976	25468976	8553170	6	145,100,99,46,41,45,	0,61022,61585,63295,64296,65204,
#Partially deleted in new
chr13	25468978	26020206	chr13:25468978-26020206	0	+	25533286	25705190	789624	37	143,100,89,46,41,74,70,128,112,166,128,78,89,45,76,106,83,50,70,85,140,139,65,173,191,184,111,75,123,79,62,57,108,89,105,92,319,	0,61020,61593,63293,64294,69009,71340,72940,74312,82359,84814,86012,89994,90742,94977,101788,102631,105829,108090,109836,110829,112840,120656,230194,236184,300067,305870,359139,368184,370567,391216,391825,393322,492596,499596,543552,550909,
#Partially deleted in new
chr13	25469020	26020287	chr13:25469020-26020287	1	+	25469020	26019985	789624	31	101,100,99,46,41,74,70,128,112,166,128,78,89,45,76,106,101,64,178,184,111,75,123,79,62,57,108,89,105,92,400,	0,60978,61541,63251,64252,68967,71298,72898,74270,82317,84772,85970,89952,90700,94935,101746,102589,102692,230147,300025,305828,359097,368142,370525,391174,391783,393280,492554,499554,543510,550867,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	25517118	25517225	chr13:25517118-25517225	3	+	25517118	25517118	8553170	1	107,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr13	25567132	25927283	chr13:25567132-25927283	0	+	25567132	25567132	8553170	20	224,106,83,50,70,85,140,139,65,120,173,184,111,75,123,79,62,57,108,173,	0,3634,4477,7675,9936,11682,12675,14686,22502,24121,132040,201913,207716,260985,270030,272413,293062,293671,295168,359978,
#Deleted in new
chr13	25863249	25863667	chr13:25863249-25863667	7	-	25863249	25863249	16724991	1	418,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	25944477	25944766	chr13:25944477-25944766	3	+	25944477	25944477	8553170	1	289,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	25950703	25950821	chr13:25950703-25950821	3	-	25950703	25950703	8553170	1	118,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	26044596	26051031	chr13:26044596-26051031	3	-	26046512	26050975	789624	2	2470,390,	0,6045,
#Deleted in new
chr13	26052275	26053385	chr13:26052275-26053385	3	-	26052275	26052275	8553170	2	397,38,	0,1072,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr13	26094723	26154175	chr13:26094723-26154175	7	-	26094723	26094723	16724991	17	103,86,107,76,54,90,78,124,160,111,129,66,68,44,41,99,100,	0,19685,20319,25007,25424,26117,32149,33479,35376,36367,37599,40804,47584,50133,54443,56084,59352,
#Partially deleted in new
chr13	26117547	26118964	chr13:26117547-26118964	7	-	26117547	26117547	16724991	3	418,247,40,	0,579,1377,
#Partially deleted in new
chr13	26132114	26222261	chr13:26132114-26222261	0	-	26132114	26132114	8553170	6	337,119,96,211,83,259,	0,83359,86396,87342,89133,89888,
#Partially deleted in new
chr13	26212761	26221842	chr13:26212761-26221842	1	-	26213823	26219649	789624	5	2831,96,211,83,61,	0,5749,6695,8486,9020,
#Partially deleted in new
chr13	26212767	26222493	chr13:26212767-26222493	3	-	26213823	26219649	789624	5	2825,96,211,83,491,	0,5743,6689,8480,9235,
#Partially deleted in new
chr13	26212774	26221703	chr13:26212774-26221703	1	-	26213823	26219649	789624	5	2818,96,211,83,190,	0,5736,6682,8473,8739,
#Partially deleted in new
chr13	26215138	26221810	chr13:26215138-26221810	0	-	26215138	26215138	8553170	5	454,78,211,83,29,	0,3372,4318,6109,6643,
#Deleted in new
chr13	26219295	26221691	chr13:26219295-26221691	0	-	26219295	26219295	8553170	3	372,83,178,	0,1952,2218,
#Deleted in new
chr13	26221252	26222089	chr13:26221252-26222089	0	-	26221252	26221252	8553170	2	78,255,	0,582,
#Deleted in new
chr13	26222190	26222654	chr13:26222190-26222654	3	+	26222190	26222190	8553170	1	464,	0,
#Deleted in new
chr13	26229331	26229644	chr13:26229331-26229644	7	-	26229331	26229331	16724991	1	313,	0,
#Partially deleted in new
chr13	26234212	26237129	chr13:26234212-26237129	7	+	26234212	26234212	16724991	3	253,388,1669,	0,540,1248,
#Partially deleted in new
chr13	26254103	26405238	chr13:26254103-26405238	0	+	26254641	26385249	789624	12	666,76,111,141,132,144,70,73,98,79,159,1283,	0,83463,94968,99636,131107,139263,142181,143049,146349,147165,147362,149852,
#Partially deleted in new
chr13	26254138	26405238	chr13:26254138-26405238	3	+	26254641	26404081	0	13	631,76,111,141,58,132,144,70,73,98,79,159,1283,	0,83428,94933,99601,128675,131072,139228,142146,143014,146314,147130,147327,149817,
#Deleted in new
chr13	26359528	26359702	chr13:26359528-26359702	3	-	26359528	26359528	8553170	1	174,	0,
#Partially deleted in new
chr13	26385210	26401599	chr13:26385210-26401599	0	+	26385210	26401599	789624	6	132,70,73,98,79,134,	0,11074,11942,15242,16058,16255,
#Partially deleted in new
chr13	26396216	26405178	chr13:26396216-26405178	0	+	26396216	26396216	8553170	6	138,73,98,79,159,1223,	0,936,4236,5052,5249,7739,
#Partially deleted in new
chr13	26396284	26404430	chr13:26396284-26404430	0	+	26396284	26404081	789624	5	70,73,98,79,475,	0,868,4168,4984,7671,
#Partially deleted in new
chr13	26400072	26405238	chr13:26400072-26405238	0	+	26400072	26400072	8553170	4	478,79,156,1283,	0,1196,1396,3883,
#Partially deleted in new
chr13	26488951	26496120	chr13:26488951-26496120	3	+	26488951	26488951	8553170	3	474,76,1657,	0,4974,5512,
#Partially deleted in new
chr13	26557702	26688943	chr13:26557702-26688943	1	+	26642270	26685845	789624	10	117,98,143,135,154,118,167,267,368,3256,	0,55258,84558,107325,109814,114169,122332,123351,124904,127985,
#Partially deleted in new
chr13	26557749	26688948	chr13:26557749-26688948	3	+	26642270	26685845	789624	10	70,98,143,135,154,118,176,267,368,3261,	0,55211,84511,107278,109767,114122,118799,123304,124857,127938,
#Deleted in new
chr13	26576885	26577675	chr13:26576885-26577675	7	+	26576885	26576885	16724991	1	790,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	26606543	26641364	chr13:26606543-26641364	0	-	26606543	26606543	8553170	3	348,192,89,	0,2859,34732,
#Partially deleted in new
chr13	26618773	26641341	chr13:26618773-26641341	0	-	26618773	26618773	8553170	3	279,54,66,	0,683,22502,
#Partially deleted in new
chr13	26618784	26641341	chr13:26618784-26641341	0	-	26618784	26618784	8553170	4	268,136,79,66,	0,1781,19852,22491,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	26618912	26641341	chr13:26618912-26641341	3	-	26618912	26618912	8553170	4	140,54,121,66,	0,544,3713,22363,
#Partially deleted in new
chr13	26638108	26641364	chr13:26638108-26641364	0	-	26638108	26638108	8553170	2	607,89,	0,3167,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	26640368	26641364	chr13:26640368-26641364	0	-	26640368	26640368	8553170	2	797,89,	0,907,
#Partially deleted in new
chr13	26641945	26676624	chr13:26641945-26676624	0	+	26641945	26641945	8553170	6	158,143,135,154,118,76,	0,315,23082,25571,29926,34603,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	26685639	26698804	chr13:26685639-26698804	3	-	26685639	26685639	8553170	2	2024,569,	0,12596,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	26755199	26760785	chr13:26755199-26760785	3	-	26758822	26759827	789624	2	4643,207,	0,5379,
#Deleted in new
chr13	26758309	26760290	chr13:26758309-26760290	1	-	26758822	26759827	789624	1	1981,	0,
#Deleted in new
chr13	26905361	26905861	chr13:26905361-26905861	7	+	26905361	26905361	16724991	1	500,	0,
#Partially deleted in new
chr13	26965966	26991996	chr13:26965966-26991996	3	-	26965966	26965966	8553170	3	380,107,89,	0,25189,25941,
#Deleted in new
chr13	26977542	26977789	chr13:26977542-26977789	7	+	26977542	26977542	16724991	1	247,	0,
#Deleted in new
chr13	27017553	27017909	chr13:27017553-27017909	7	-	27017553	27017553	16724991	1	356,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr13	27066141	27171896	chr13:27066141-27171896	3	-	27069282	27171639	0	9	3243,79,198,84,77,230,214,81,305,	0,4929,9049,23741,23940,29459,39589,50374,105450,
#Deleted in new
chr13	27077217	27077962	chr13:27077217-27077962	7	+	27077217	27077217	16724991	1	745,	0,
#Partially deleted in new
chr13	27089437	27095706	chr13:27089437-27095706	0	-	27089878	27095706	789624	3	529,77,106,	0,644,6163,
#Partially deleted in new
chr13	27162854	27169135	chr13:27162854-27169135	3	+	27162854	27162854	8553170	2	69,199,	0,6082,
#Deleted in new
chr13	27170090	27171701	chr13:27170090-27171701	1	-	27170320	27171639	789624	2	239,110,	0,1501,
#Partially deleted in new
chr13	27172258	27182998	chr13:27172258-27182998	3	+	27172258	27172258	8553170	2	114,165,	0,10575,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	27178262	27208001	chr13:27178262-27208001	1	-	27178262	27178262	8553170	5	312,153,60,73,28,	0,8243,12359,29032,29711,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	27203086	27251288	chr13:27203086-27251288	3	-	27203086	27203086	8553170	5	119,73,77,235,69,	0,4208,4887,17534,48133,
#Partially deleted in new
chr13	27236281	27236811	chr13:27236281-27236811	3	-	27236281	27236281	8553170	2	306,114,	0,416,
#Partially deleted in new
chr13	27251308	27256568	chr13:27251308-27256568	3	+	27253776	27256525	0	6	277,79,62,113,151,133,	0,2456,2911,3933,4875,5127,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	27251361	27254467	chr13:27251361-27254467	0	+	27251361	27251361	8553170	3	224,79,248,	0,2403,2858,
#Partially deleted in new
chr13	27251560	27256691	chr13:27251560-27256691	0	+	27253776	27256210	789624	6	25,79,62,108,151,256,	0,2204,2659,3681,4623,4875,
#Partially deleted in new
chr13	27251578	27256568	chr13:27251578-27256568	1	+	27253776	27256525	0	6	78,79,62,113,151,133,	0,2186,2641,3663,4605,4857,
#Partially deleted in new
chr13	27251582	27256568	chr13:27251582-27256568	1	+	27253776	27256525	0	6	268,79,62,113,151,133,	0,2182,2637,3659,4601,4853,
#Partially deleted in new
chr13	27251596	27256568	chr13:27251596-27256568	1	+	27253776	27256525	0	6	103,79,62,113,151,133,	0,2168,2623,3645,4587,4839,
#Partially deleted in new
chr13	27253704	27256307	chr13:27253704-27256307	0	+	27253776	27256307	789624	4	139,62,113,124,	0,515,1537,2479,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	27253764	27255856	chr13:27253764-27255856	0	+	27253764	27253764	8553170	3	79,62,615,	0,455,1477,
#Partially deleted in new
chr13	27253764	27256545	chr13:27253764-27256545	0	+	27253776	27255354	789624	4	79,113,151,110,	0,1477,2419,2671,
#Partially deleted in new
chr13	27254943	27256548	chr13:27254943-27256548	0	+	27254943	27254943	8553170	3	411,151,113,	0,1240,1492,
#Deleted in new
chr13	27255063	27255135	chr13:27255063-27255135	3	+	27255063	27255063	789624	1	72,	0,
#Deleted in new
chr13	27255400	27255526	chr13:27255400-27255526	3	+	27255400	27255400	789624	1	126,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	27270326	27273690	chr13:27270326-27273690	3	+	27270944	27273494	789624	4	742,57,80,664,	0,1157,1312,2700,
#Partially deleted in new
chr13	27271176	27273276	chr13:27271176-27273276	0	+	27271176	27271176	8553170	4	28,57,80,250,	0,307,462,1850,
#Partially deleted in new
chr13	27271585	27273400	chr13:27271585-27273400	0	+	27271585	27271585	8553170	2	133,374,	0,1441,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	27343686	27343746	chr13:27343686-27343746	3	-	27343686	27343686	8553170	1	60,	0,
#Partially deleted in new
chr13	27373347	27374366	chr13:27373347-27374366	3	+	27373347	27373347	8553170	2	207,373,	0,646,
#Partially deleted in new
chr13	27402475	27402587	chr13:27402475-27402587	3	-	27402475	27402475	8553170	1	112,	0,
#Partially deleted in new
chr13	27424543	27435688	chr13:27424543-27435688	1	+	27424737	27435597	789624	9	395,101,97,89,74,81,230,60,256,	0,2548,5326,5989,8187,9595,10261,10589,10889,
#Partially deleted in new
chr13	27424637	27434169	chr13:27424637-27434169	0	+	27424737	27430543	789624	6	301,101,97,84,74,31,	0,2454,5232,5900,8093,9501,
#Partially deleted in new
chr13	27424661	27435688	chr13:27424661-27435688	0	+	27424737	27434217	789624	8	277,101,97,89,81,230,60,256,	0,2430,5208,5871,9477,10143,10471,10771,
#Partially deleted in new
chr13	27424675	27432745	chr13:27424675-27432745	0	+	27424737	27425052	789624	5	490,101,97,89,15,	0,2416,5194,5857,8055,
#Partially deleted in new
chr13	27424737	27435597	chr13:27424737-27435597	3	+	27424737	27435597	789624	9	201,101,97,89,74,81,230,60,165,	0,2354,5132,5795,7993,9401,10067,10395,10695,
#Partially deleted in new
chr13	27424765	27434150	chr13:27424765-27434150	0	+	27424765	27424765	8553170	6	88,101,97,89,74,12,	0,2326,5104,5767,7965,9373,
#Partially deleted in new
chr13	27425410	27435688	chr13:27425410-27435688	0	+	27425410	27425410	8553170	9	931,101,97,89,74,81,230,60,256,	0,1681,4459,5122,7320,8728,9394,9722,10022,
#Partially deleted in new
chr13	27429212	27435034	chr13:27429212-27435034	0	+	27429212	27429212	8553170	6	177,97,89,74,81,230,	0,657,1320,3518,4926,5592,
#Deleted in new
chr13	27434656	27435823	chr13:27434656-27435823	0	+	27434656	27434656	8553170	3	378,60,391,	0,476,776,
#Partially deleted in new
chr13	27435642	27450574	chr13:27435642-27450574	3	-	27435674	27440448	789624	5	251,158,461,69,66,	0,1473,4346,9445,14866,
#Partially deleted in new
chr13	27435649	27440475	chr13:27435649-27440475	1	-	27435674	27440448	789624	3	244,158,487,	0,1466,4339,
#Partially deleted in new
chr13	27435683	27450131	chr13:27435683-27450131	0	-	27435683	27435683	8553170	5	210,158,461,50,68,	0,1432,4305,9404,14380,
#Partially deleted in new
chr13	27437116	27450041	chr13:27437116-27450041	0	-	27437116	27437116	8553170	4	157,461,69,190,	0,2872,7971,12735,
#Partially deleted in new
chr13	27437144	27450164	chr13:27437144-27450164	0	-	27437144	27437144	8553170	4	129,461,69,101,	0,2844,7943,12919,
#Partially deleted in new
chr13	27437268	27450143	chr13:27437268-27450143	0	-	27437268	27437268	8553170	5	5,461,69,67,80,	0,2720,7819,12583,12795,
#Partially deleted in new
chr13	27440205	27450587	chr13:27440205-27450587	0	-	27440205	27440205	8553170	3	244,50,79,	0,4882,10303,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	27440275	27441245	chr13:27440275-27441245	0	-	27440275	27440275	8553170	2	174,229,	0,741,
#Partially deleted in new
chr13	27440280	27450199	chr13:27440280-27450199	0	-	27440280	27440280	8553170	3	169,69,58,	0,4807,9861,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	27488137	27488232	chr13:27488137-27488232	3	+	27488137	27488137	8553170	1	95,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr13	27545910	27620404	chr13:27545910-27620404	3	-	27548334	27581703	0	10	2560,159,232,178,144,369,200,248,507,30,	0,4422,7297,10325,13931,16502,21729,23118,35386,74464,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr13	27545924	27608013	chr13:27545924-27608013	1	-	27548334	27581703	8553170	11	2546,159,232,178,144,369,200,248,507,42,23,	0,4408,7283,10311,13917,16488,21715,23104,35372,60805,62066,
#Partially deleted in new
chr13	27620741	27621597	chr13:27620741-27621597	0	+	27620741	27620741	8553170	2	363,261,	0,595,
#Partially deleted in new
chr13	27620742	27648444	chr13:27620742-27648444	0	+	27648436	27648444	8553170	3	398,101,66,	0,594,27636,
#Partially deleted in new
chr13	27620757	27621941	chr13:27620757-27621941	0	+	27620757	27620757	8553170	2	383,605,	0,579,
#Partially deleted in new
chr13	27620918	27667353	chr13:27620918-27667353	3	+	27648436	27665953	789624	3	519,75,1668,	0,27460,44767,
#Partially deleted in new
chr13	27620946	27667022	chr13:27620946-27667022	1	+	27648436	27665953	789624	3	194,75,1337,	0,27432,44739,
#Partially deleted in new
chr13	27621192	27648436	chr13:27621192-27648436	0	+	27621192	27621192	8553170	2	71,58,	0,27186,
#Partially deleted in new
chr13	27621421	27623452	chr13:27621421-27623452	1	+	27621983	27623250	789624	2	588,578,	0,1453,
#Partially deleted in new
chr13	27621778	27667415	chr13:27621778-27667415	1	+	27621983	27665953	789624	3	231,75,1730,	0,26600,43907,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	27621869	27651549	chr13:27621869-27651549	1	+	27621983	27650069	789624	3	140,75,1508,	0,26509,28172,
#Partially deleted in new
chr13	27621874	27667410	chr13:27621874-27667410	1	+	27621983	27665690	789624	3	135,71,1725,	0,26504,43811,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	27621874	27744237	chr13:27621874-27744237	1	+	27621983	27738746	789624	4	135,75,61,4321,	0,26504,116832,118042,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	27621891	27667410	chr13:27621891-27667410	0	+	27621983	27650069	789624	4	118,75,200,1725,	0,26487,28150,43794,
#Partially deleted in new
chr13	27621891	27667411	chr13:27621891-27667411	1	+	27621983	27665953	789624	3	118,75,1726,	0,26487,43794,
#Partially deleted in new
chr13	27621891	27623449	chr13:27621891-27623449	1	+	27621983	27623250	789624	2	118,575,	0,983,
#Partially deleted in new
chr13	27621892	27667411	chr13:27621892-27667411	1	+	27648436	27665953	789624	4	117,25,75,1726,	0,24301,26486,43793,
#Partially deleted in new
chr13	27621946	27622390	chr13:27621946-27622390	0	+	27621946	27621946	8553170	2	63,37,	0,407,
#Partially deleted in new
chr13	27621953	27623452	chr13:27621953-27623452	1	+	27622899	27623250	789624	2	56,612,	0,887,
#Partially deleted in new
chr13	27622158	27622910	chr13:27622158-27622910	0	+	27622158	27622158	8553170	2	64,36,	0,716,
#Partially deleted in new
chr13	27648009	27666262	chr13:27648009-27666262	0	+	27648009	27648009	8553170	2	444,577,	0,17676,
#Partially deleted in new
chr13	27648386	27660811	chr13:27648386-27660811	0	+	27648386	27648386	8553170	2	67,33,	0,12392,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	27650151	27667353	chr13:27650151-27667353	0	+	27650151	27650151	8553170	2	1201,1668,	0,15534,
#Partially deleted in new
chr13	27660867	27665737	chr13:27660867-27665737	0	+	27660867	27660867	8553170	2	48,52,	0,4818,
#Deleted in new
chr13	27664626	27666260	chr13:27664626-27666260	0	+	27664626	27664626	8553170	1	1634,	0,
#Deleted in new
chr13	27665112	27665753	chr13:27665112-27665753	0	+	27665112	27665112	8553170	2	32,68,	0,573,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	27667539	27680566	chr13:27667539-27680566	3	-	27667539	27667539	8553170	3	213,596,53,	0,10814,12974,
#Partially deleted in new
chr13	27696392	27697204	chr13:27696392-27697204	7	-	27696392	27696392	16724991	1	812,	0,
#Deleted in new
chr13	27792642	27794768	chr13:27792642-27794768	3	+	27792690	27793948	789624	2	460,1203,	0,923,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	27819375	27917298	chr13:27819375-27917298	3	-	27819375	27819375	8553170	5	1092,618,130,529,149,	0,3379,14645,28632,97774,
#Deleted in new
chr13	27920019	27926231	chr13:27920019-27926231	3	+	27920138	27924701	789624	2	525,1976,	0,4236,
#Deleted in new
chr13	27945259	27945415	chr13:27945259-27945415	7	+	27945259	27945259	16724991	1	156,	0,
#Deleted in new
chr13	27953525	27955370	chr13:27953525-27955370	3	+	27953525	27953525	789624	1	1845,	0,
#Partially deleted in new
chr13	27962136	27971139	chr13:27962136-27971139	3	-	27963114	27969006	0	3	1233,146,2674,	0,2733,6329,
#Partially deleted in new
chr13	27963003	27967325	chr13:27963003-27967325	0	-	27963003	27963003	8553170	3	366,146,69,	0,1866,4253,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	27977713	27988654	chr13:27977713-27988654	3	-	27978105	27988637	789624	2	739,192,	0,10749,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	27989295	27989584	chr13:27989295-27989584	3	-	27989295	27989295	8553170	1	289,	0,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr13	28003273	28100592	chr13:28003273-28100592	3	-	28004051	28100510	0	24	901,106,100,112,123,128,83,154,111,105,133,107,179,109,104,169,154,140,128,130,116,203,122,125,	0,11178,11883,12316,15193,20076,21587,23814,24904,30613,30808,31027,32221,32661,33911,45001,46110,46361,46821,49271,54073,58593,67217,97194,
#Partially deleted in new
chr13	28003613	28100592	chr13:28003613-28100592	0	-	28025402	28100510	789624	25	561,106,100,112,123,128,83,132,154,111,105,133,107,179,109,104,169,154,140,128,130,116,203,122,125,	0,10838,11543,11976,14853,19736,21247,21670,23474,24564,30273,30468,30687,31881,32321,33571,44661,45770,46021,46481,48931,53733,58253,66877,96854,
#Partially deleted in new
chr13	28003946	28014512	chr13:28003946-28014512	0	-	28003946	28003946	8553170	3	228,185,61,	0,5359,10505,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	28067586	28068334	chr13:28067586-28068334	7	+	28067586	28067586	16724991	1	748,	0,
#Deleted in new
chr13	28107430	28107877	chr13:28107430-28107877	7	+	28107430	28107430	16724991	1	447,	0,
#Deleted in new
chr13	28136842	28138193	chr13:28136842-28138193	3	-	28136842	28136842	8553170	1	1351,	0,
#Partially deleted in new
chr13	28138505	28292539	chr13:28138505-28292539	3	+	28138657	28292522	789624	19	582,122,67,71,162,148,248,105,58,162,117,102,166,91,140,130,65,139,158,	0,35766,37987,39359,58679,81725,117786,121941,122895,128209,128589,128794,132195,133475,138731,141906,142809,149478,153876,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr13	28138505	28272313	chr13:28138505-28272313	0	+	28138505	28138505	8553170	14	582,122,67,71,162,148,248,105,58,162,117,102,166,333,	0,35766,37987,39359,58679,81725,117786,121941,122895,128209,128589,128794,132195,133475,
#Partially deleted in new
chr13	28139032	28295335	chr13:28139032-28295335	1	+	28174279	28292522	789624	18	55,122,67,71,148,248,105,58,162,117,102,166,91,140,130,65,139,2954,	0,35239,37460,38832,81198,117259,121414,122368,127682,128062,128267,131668,132948,138204,141379,142282,148951,153349,
#Deleted in new
chr13	28214512	28215897	chr13:28214512-28215897	7	+	28214512	28214512	16724991	1	1385,	0,
#Deleted in new
chr13	28232500	28232607	chr13:28232500-28232607	3	+	28232500	28232500	8553170	1	107,	0,
#Partially deleted in new
chr13	28239556	28256539	chr13:28239556-28256539	0	+	28239556	28239556	8553170	2	481,248,	0,16735,
#Partially deleted in new
chr13	28300343	28495095	chr13:28300343-28495095	3	-	28303166	28494843	0	30	3025,95,85,143,106,100,112,123,98,157,89,114,105,133,107,132,147,309,109,115,160,170,118,175,137,163,125,227,97,316,	0,6334,8499,11246,11649,17154,19079,21119,21918,22446,27118,29271,33681,38824,45101,57210,84541,89452,96616,105436,126815,127408,129706,130792,133475,133714,137877,166559,167177,194436,
#Partially deleted in new
chr13	28303125	28328415	chr13:28303125-28328415	1	-	28303166	28327542	789624	12	243,95,85,143,106,100,112,123,98,157,89,125,	0,3552,5717,8464,8867,14372,16297,18337,19136,19664,24336,25165,
#Partially deleted in new
chr13	28303125	28308434	chr13:28303125-28308434	1	-	28303166	28306733	789624	3	243,95,96,	0,3552,5213,
#Partially deleted in new
chr13	28303133	28322633	chr13:28303133-28322633	1	-	28303166	28322477	0	10	235,95,85,143,106,100,112,123,98,178,	0,3544,5709,8456,8859,14364,16289,18329,19128,19322,
#Partially deleted in new
chr13	28303143	28346289	chr13:28303143-28346289	1	-	28303166	28306733	789624	17	225,95,85,143,106,100,112,123,98,157,89,114,105,133,107,62,73,	0,3534,5699,8446,8849,14354,16279,18319,19118,19646,24318,26471,30881,36024,42301,42636,43073,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr13	28368095	28495128	chr13:28368095-28495128	1	-	28368577	28494843	0	15	568,147,309,109,115,160,170,118,175,137,163,125,227,97,349,	0,16789,21700,28864,37684,59063,59656,61954,63040,65723,65962,70125,98807,99425,126684,
#Partially deleted in new
chr13	28385547	28495079	chr13:28385547-28495079	1	-	28389700	28494843	0	13	4557,109,115,160,170,118,175,137,163,125,227,97,300,	0,11412,20232,41611,42204,44502,45588,48271,48510,52673,81355,81973,109232,
#Partially deleted in new
chr13	28385566	28495145	chr13:28385566-28495145	1	-	28389603	28494843	789624	14	4066,309,109,115,160,170,118,175,137,163,125,227,97,366,	0,4229,11393,20213,41592,42185,44483,45569,48252,48491,52654,81336,81954,109213,
#Partially deleted in new
chr13	28399043	28495128	chr13:28399043-28495128	1	-	28399043	28494843	0	12	75,115,160,170,118,175,137,163,125,227,97,349,	0,6736,28115,28708,31006,32092,34775,35014,39177,67859,68477,95736,
#Deleted in new
chr13	28495632	28497267	chr13:28495632-28497267	3	+	28495632	28495632	8553170	1	1635,	0,
#Deleted in new
chr13	28598832	28600052	chr13:28598832-28600052	7	+	28598832	28598832	16724991	1	1220,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	28629793	28629883	chr13:28629793-28629883	3	+	28629793	28629793	8553170	1	90,	0,
#Partially deleted in new
chr13	28659103	28678925	chr13:28659103-28678925	3	+	28659184	28678102	789624	6	84,98,61,102,94,891,	0,3306,5405,9369,13235,18931,
#Partially deleted in new
chr13	28659103	28678925	chr13:28659103-28678925	1	+	28668493	28678102	789624	7	84,98,98,61,102,94,891,	0,718,3306,5405,9369,13235,18931,
#Partially deleted in new
chr13	28700063	28704557	chr13:28700063-28704557	0	-	28700063	28700063	8553170	2	1518,615,	0,3879,
#Partially deleted in new
chr13	28700079	28718841	chr13:28700079-28718841	3	-	28701496	28717998	789624	6	1502,157,84,871,213,346,	0,3863,10680,12600,17730,18416,
#Partially deleted in new
chr13	28700716	28718970	chr13:28700716-28718970	1	-	28700946	28717998	789624	7	240,81,157,84,871,213,475,	0,784,3226,10043,11963,17093,17779,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	28703701	28703807	chr13:28703701-28703807	3	-	28703701	28703701	8553170	1	106,	0,
#Partially deleted in new
chr13	28722385	28724021	chr13:28722385-28724021	7	-	28722385	28722385	16724991	2	982,517,	0,1119,
#Deleted in new
chr13	28778223	28778448	chr13:28778223-28778448	7	-	28778223	28778223	16724991	1	225,	0,
#Deleted in new
chr13	28778557	28778937	chr13:28778557-28778937	7	+	28778557	28778557	16724991	1	380,	0,
#Partially deleted in new
chr13	28820347	29505947	chr13:28820347-29505947	1	+	29024668	29503206	789624	16	264,73,2447,241,198,162,99,212,67,215,106,74,99,120,98,2955,	0,19430,204109,213537,280425,461356,504265,538914,619635,659802,667552,672298,676890,678070,680749,682645,
#Partially deleted in new
chr13	29071983	29281770	chr13:29071983-29281770	0	+	29071983	29071983	8553170	3	188,198,67,	0,28789,209720,
#Partially deleted in new
chr13	29239378	29250554	chr13:29239378-29250554	3	-	29239378	29239378	8553170	2	580,140,	0,11036,
#Partially deleted in new
chr13	29239622	29250554	chr13:29239622-29250554	0	-	29239622	29239622	8553170	3	336,170,140,	0,2906,10792,
#Partially deleted in new
chr13	29239786	29250554	chr13:29239786-29250554	1	-	29239786	29239786	8553170	3	341,170,140,	0,2742,10628,
#Partially deleted in new
chr13	29306777	29307785	chr13:29306777-29307785	7	+	29306777	29306777	16724991	1	1008,	0,
#Deleted in new
chr13	29339565	29339869	chr13:29339565-29339869	7	-	29339565	29339565	16724991	1	304,	0,
#Partially deleted in new
chr13	29428626	29503736	chr13:29428626-29503736	3	+	29428842	29503206	789624	9	270,67,215,106,74,99,120,98,744,	0,11356,51523,59273,64019,68611,69791,72470,74366,
#Partially deleted in new
chr13	29428708	29503257	chr13:29428708-29503257	1	+	29480298	29503206	789624	8	188,215,106,74,99,120,98,265,	0,51441,59191,63937,68529,69709,72388,74284,
#Partially deleted in new
chr13	29476514	29490105	chr13:29476514-29490105	3	-	29476514	29476514	8553170	4	425,438,648,481,	0,8354,10985,13110,
#Partially deleted in new
chr13	29476514	29487517	chr13:29476514-29487517	0	-	29476514	29476514	8553170	4	425,264,438,18,	0,5599,8354,10985,
#Deleted in new
chr13	29483916	29485289	chr13:29483916-29485289	0	-	29483916	29483916	8553170	2	311,421,	0,952,
#Partially deleted in new
chr13	29496346	29503140	chr13:29496346-29503140	0	+	29496346	29496346	8553170	5	104,99,120,98,148,	0,891,2071,4750,6646,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	29496415	29497789	chr13:29496415-29497789	0	+	29496415	29496415	8553170	2	35,552,	0,822,
#Partially deleted in new
chr13	29509409	29595688	chr13:29509409-29595688	3	-	29514479	29536188	789624	13	5174,109,167,218,103,140,223,122,175,159,384,100,273,	0,6728,7734,8163,10037,12907,13856,14722,21128,23414,26409,44351,86006,
#Deleted in new
chr13	29516866	29519510	chr13:29516866-29519510	0	-	29516866	29516866	8553170	3	444,218,64,	0,706,2580,
#Partially deleted in new
chr13	29535823	29586792	chr13:29535823-29586792	0	-	29535823	29536188	789624	3	379,100,68,	0,17937,50901,
#Partially deleted in new
chr13	29764370	29850684	chr13:29764370-29850684	3	-	29767254	29849538	789624	5	2937,78,87,109,1173,	0,3247,7741,12784,85141,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	29864371	29864629	chr13:29864371-29864629	3	-	29864371	29864371	8553170	1	258,	0,
#Deleted in new
chr13	29865958	29866169	chr13:29865958-29866169	7	-	29865958	29865958	16724991	1	211,	0,
#Partially deleted in new
chr13	29872612	29888405	chr13:29872612-29888405	3	-	29872612	29872612	789624	2	536,377,	0,15416,
#Partially deleted in new
chr13	29918646	29926651	chr13:29918646-29926651	3	-	29918646	29918646	789624	2	426,149,	0,7856,
#Partially deleted in new
chr13	29935904	29950488	chr13:29935904-29950488	3	+	29935904	29935904	789624	6	320,186,80,104,169,172,	0,611,1297,2001,11698,14412,
#Partially deleted in new
chr13	29937905	29942567	chr13:29937905-29942567	1	+	29937905	29937905	8553170	2	104,471,	0,4191,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	30022020	30023800	chr13:30022020-30023800	3	-	30022020	30022020	8553170	1	1780,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	30103177	30108868	chr13:30103177-30108868	3	-	30103177	30103177	789624	2	2518,100,	0,5591,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	30107598	30108875	chr13:30107598-30108875	0	-	30107598	30107598	8553170	2	373,107,	0,1170,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	30151885	30159621	chr13:30151885-30159621	3	-	30151885	30151885	8553170	2	264,6588,	0,1148,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	30154065	30154586	chr13:30154065-30154586	3	+	30154065	30154065	8553170	2	76,298,	0,223,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	30196442	30196881	chr13:30196442-30196881	3	-	30196442	30196442	8553170	1	439,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr13	30202629	30307484	chr13:30202629-30307484	3	-	30208539	30283777	0	11	6109,127,135,127,159,106,128,169,161,176,154,	0,7686,24782,27838,28684,37830,38329,52817,77433,80986,104701,
#Partially deleted in new
chr13	30208479	30307026	chr13:30208479-30307026	1	-	30208539	30283777	0	11	259,127,135,127,159,106,128,169,161,176,87,	0,1836,18932,21988,22834,31980,32479,46967,71583,75136,98460,
#Partially deleted in new
chr13	30208724	30210664	chr13:30208724-30210664	0	-	30208724	30208724	8553170	2	14,349,	0,1591,
#Partially deleted in new
chr13	30255479	30306856	chr13:30255479-30306856	0	-	30255479	30283777	789624	4	136,161,176,93,	0,24583,28136,51284,
#Partially deleted in new
chr13	30255487	30307044	chr13:30255487-30307044	0	-	30255487	30283777	789624	4	128,161,176,332,	0,24575,28128,51225,
#Deleted in new
chr13	30281764	30281869	chr13:30281764-30281869	3	+	30281764	30281764	8553170	1	105,	0,
#Partially deleted in new
chr13	30296146	30296735	chr13:30296146-30296735	7	+	30296146	30296146	16724991	1	589,	0,
#Partially deleted in new
chr13	30316359	30319903	chr13:30316359-30319903	3	-	30316359	30316359	8553170	2	275,155,	0,3389,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	30340269	30373899	chr13:30340269-30373899	3	-	30340269	30340269	789624	5	1199,66,117,90,117,	0,22891,27331,32015,33513,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	30342459	30365761	chr13:30342459-30365761	1	-	30342459	30342459	8553170	5	427,123,66,137,292,	0,15794,20701,21609,23010,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	30344671	30347167	chr13:30344671-30347167	3	+	30344671	30344671	8553170	1	2496,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	30357264	30364196	chr13:30357264-30364196	0	-	30357264	30357264	8553170	5	128,148,123,66,128,	0,477,989,5896,6804,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	30357741	30377145	chr13:30357741-30377145	1	-	30357741	30357741	8553170	6	148,123,66,90,310,319,	0,512,5419,14543,17725,19085,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	30357744	30372374	chr13:30357744-30372374	0	-	30357744	30357744	8553170	4	145,123,66,90,	0,509,5416,14540,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	30363175	30373032	chr13:30363175-30373032	0	-	30363175	30363175	8553170	4	51,117,90,211,	0,4425,9109,9646,
#Partially deleted in new
chr13	30370471	30373914	chr13:30370471-30373914	0	-	30370471	30370471	8553170	3	54,90,132,	0,1813,3311,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	30374002	30376964	chr13:30374002-30376964	0	-	30374002	30374002	8553170	3	91,310,138,	0,1464,2824,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	30388784	30404967	chr13:30388784-30404967	3	-	30388784	30388784	8553170	4	200,80,161,3736,	0,10563,10729,12447,
#Deleted in new
chr13	30419518	30422237	chr13:30419518-30422237	3	-	30419518	30419518	789624	2	427,21,	0,2698,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	30422487	30428616	chr13:30422487-30428616	3	+	30427990	30428455	789624	3	190,94,1892,	0,2320,4237,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	30422517	30428565	chr13:30422517-30428565	1	+	30427990	30428455	789624	4	160,94,54,1205,	0,2290,4207,4843,
#Partially deleted in new
chr13	30427990	30428455	chr13:30427990-30428455	1	+	30427990	30428455	789624	1	465,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	30456703	30465965	chr13:30456703-30465965	1	-	30461356	30463680	0	5	4830,175,146,164,170,	0,5834,6503,6827,9092,
#Partially deleted in new
chr13	30458746	30617597	chr13:30458746-30617597	3	-	30461356	30463680	0	5	2787,175,146,164,927,	0,3791,4460,4784,157924,
#Deleted in new
chr13	30459849	30464310	chr13:30459849-30464310	1	-	30461356	30463680	0	5	1684,175,146,164,150,	0,2688,3357,3681,4311,
#Deleted in new
chr13	30460894	30464247	chr13:30460894-30464247	1	-	30461682	30463680	789624	5	639,50,175,146,717,	0,744,1643,2312,2636,
#Deleted in new
chr13	30460906	30465242	chr13:30460906-30465242	1	-	30461356	30463680	0	5	627,175,146,164,170,	0,1631,2300,2624,4166,
#Deleted in new
chr13	30461495	30465938	chr13:30461495-30465938	1	-	30461682	30463680	789624	5	193,175,146,164,143,	0,1042,1711,2035,4300,
#Deleted in new
chr13	30462345	30463264	chr13:30462345-30463264	0	-	30462345	30462345	8553170	2	367,58,	0,861,
#Deleted in new
chr13	30463310	30465914	chr13:30463310-30465914	0	-	30463310	30463310	8553170	2	384,119,	0,2485,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	30466116	30482294	chr13:30466116-30482294	3	+	30466116	30466116	8553170	4	176,124,93,1050,	0,3370,14313,15128,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	30539596	30543461	chr13:30539596-30543461	7	-	30539596	30539596	16724991	2	1369,445,	0,3420,
#Deleted in new
chr13	30541642	30542897	chr13:30541642-30542897	7	-	30541642	30541642	16724991	1	1255,	0,
#Deleted in new
chr13	30553669	30554693	chr13:30553669-30554693	7	+	30553669	30553669	16724991	1	1024,	0,
#Partially deleted in new
chr13	30617692	30631474	chr13:30617692-30631474	0	+	30617692	30617692	8553170	3	364,129,640,	0,4071,13142,
#Partially deleted in new
chr13	30617782	30659549	chr13:30617782-30659549	3	+	30621140	30659356	789624	9	274,167,129,640,114,130,126,158,2076,	0,3290,3981,13052,19961,24845,29149,35365,39691,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	30617936	30660770	chr13:30617936-30660770	1	+	30642632	30659356	789624	7	120,129,114,130,126,158,3297,	0,3827,19807,24691,28995,35211,39537,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	30684028	30684278	chr13:30684028-30684278	3	-	30684028	30684028	8553170	1	250,	0,
#Partially deleted in new
chr13	30713477	30764425	chr13:30713477-30764425	1	+	30713725	30764106	789624	6	364,125,100,71,82,482,	0,22073,30582,38574,42466,50466,
#Partially deleted in new
chr13	30735507	30764426	chr13:30735507-30764426	3	+	30735605	30764106	0	5	168,100,71,82,483,	0,8552,16544,20436,28436,
#Deleted in new
chr13	30742335	30744396	chr13:30742335-30744396	0	+	30742335	30742335	8553170	2	210,337,	0,1724,
#Partially deleted in new
chr13	30803205	30810645	chr13:30803205-30810645	3	+	30803205	30803205	5263520	2	387,519,	0,6921,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	30881932	30931283	chr13:30881932-30931283	1	-	30881932	30881932	8553170	6	357,82,123,73,74,38,	0,1321,2005,17981,48868,49313,
#Deleted in new
chr13	30882550	30883395	chr13:30882550-30883395	3	+	30882550	30882550	789624	2	109,302,	0,543,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	30882840	30932606	chr13:30882840-30932606	3	-	30882840	30882840	789624	4	495,123,74,1361,	0,1097,47960,48405,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	30882948	30931625	chr13:30882948-30931625	1	-	30882948	30882948	8553170	3	387,74,380,	0,47852,48297,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	30899405	30931358	chr13:30899405-30931358	0	-	30899405	30899405	8553170	3	581,74,113,	0,31395,31840,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	30904756	30931554	chr13:30904756-30931554	1	-	30904756	30904756	8553170	3	414,74,309,	0,26044,26489,
#Partially deleted in new
chr13	30906190	30925572	chr13:30906190-30925572	3	+	30906515	30924435	789624	5	603,110,113,286,1262,	0,11212,14823,15370,18120,
#Partially deleted in new
chr13	30906705	30924449	chr13:30906705-30924449	0	+	30906705	30924319	789624	4	88,110,113,139,	0,10697,14308,17605,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	30908775	30931428	chr13:30908775-30931428	0	-	30908775	30908775	8553170	3	334,74,183,	0,22025,22470,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	30916045	30931509	chr13:30916045-30931509	0	-	30916045	30916045	8553170	3	312,74,264,	0,14755,15200,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	30916045	30931519	chr13:30916045-30931519	0	-	30916045	30916045	8553170	3	364,74,274,	0,14755,15200,
#Partially deleted in new
chr13	30916183	30931429	chr13:30916183-30931429	1	-	30916183	30916183	8553170	3	593,74,184,	0,14617,15062,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	30921973	30932456	chr13:30921973-30932456	0	-	30921973	30921973	8553170	4	887,74,691,181,	0,8827,9272,10302,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	30928657	30931542	chr13:30928657-30931542	1	-	30928657	30928657	8553170	3	482,74,297,	0,2143,2588,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	30930671	30932584	chr13:30930671-30932584	1	-	30930671	30930671	789624	3	203,691,309,	0,574,1604,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	30930845	30932253	chr13:30930845-30932253	1	-	30930845	30930845	8553170	3	29,691,145,	0,400,1263,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	30931628	30932483	chr13:30931628-30932483	0	-	30931628	30931628	8553170	2	308,375,	0,480,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	30931713	30933437	chr13:30931713-30933437	0	-	30931713	30931713	8553170	2	223,133,	0,1591,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	30931713	30933846	chr13:30931713-30933846	0	-	30931713	30931713	8553170	3	223,366,542,	0,395,1591,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	30931786	30933431	chr13:30931786-30933431	1	-	30931786	30931786	8553170	2	688,127,	0,1518,
#Partially deleted in new
chr13	30932702	30975502	chr13:30932702-30975502	3	+	30932715	30974907	789624	7	74,85,166,157,177,162,657,	0,6991,19957,24170,33519,36182,42143,
#Deleted in new
chr13	30932702	30933190	chr13:30932702-30933190	0	+	30932702	30932702	8553170	2	74,182,	0,306,
#Partially deleted in new
chr13	30932724	30975016	chr13:30932724-30975016	0	+	30932724	30956921	789624	6	52,85,157,177,162,171,	0,6969,24148,33497,36160,42121,
#Partially deleted in new
chr13	30956957	30975500	chr13:30956957-30975500	0	+	30956957	30956957	8553170	2	72,655,	0,17888,
#Partially deleted in new
chr13	30973288	30977623	chr13:30973288-30977623	3	-	30973288	30973288	8553170	3	193,80,64,	0,1519,4271,
#Deleted in new
chr13	30995161	30996138	chr13:30995161-30996138	3	-	30995161	30995161	8553170	2	314,85,	0,892,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr13	31063305	31115699	chr13:31063305-31115699	7	+	31063305	31063305	16724991	16	68,118,96,241,165,102,96,51,46,58,130,58,127,25,55,106,	0,1672,4025,13770,16381,25977,29668,35795,36865,38419,41689,48439,48772,50542,51178,52288,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr13	31134973	31162388	chr13:31134973-31162388	1	-	31137317	31162094	789624	16	2551,162,120,108,126,138,132,206,134,107,229,245,123,141,58,407,	0,3433,3807,4026,5210,6148,8818,10589,12985,13400,14980,15973,19659,20540,23832,27008,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr13	31135048	31161927	chr13:31135048-31161927	3	-	31137317	31161582	789624	18	2476,162,120,108,126,138,132,206,134,107,229,245,134,100,123,141,58,452,	0,3358,3732,3951,5135,6073,8743,10514,12910,13325,14905,15898,16560,17803,19584,20465,23757,26427,
#Deleted in new
chr13	31136624	31138568	chr13:31136624-31138568	0	-	31137088	31138568	789624	3	493,157,162,	0,743,1782,
#Partially deleted in new
chr13	31136624	31162388	chr13:31136624-31162388	1	-	31137317	31162094	789624	18	900,162,120,108,126,138,132,206,134,107,229,245,134,100,123,141,58,407,	0,1782,2156,2375,3559,4497,7167,8938,11334,11749,13329,14322,14984,16227,18008,18889,22181,25357,
#Partially deleted in new
chr13	31136627	31161927	chr13:31136627-31161927	1	-	31137317	31161582	789624	17	897,162,120,108,126,138,206,134,107,229,245,134,100,123,141,58,452,	0,1779,2153,2372,3556,4494,8935,11331,11746,13326,14319,14981,16224,18005,18886,22178,24848,
#Partially deleted in new
chr13	31136627	31161927	chr13:31136627-31161927	0	-	31152908	31161582	789624	17	897,162,120,108,126,138,132,206,134,107,229,245,134,100,140,58,452,	0,1779,2153,2372,3556,4494,7164,8935,11331,11746,13326,14319,14981,16224,18887,22178,24848,
#Partially deleted in new
chr13	31136972	31152501	chr13:31136972-31152501	0	-	31136972	31136972	8553170	11	552,162,120,108,1076,132,206,134,107,229,1555,	0,1434,1808,2027,3211,6819,8590,10986,11401,12981,13974,
#Deleted in new
chr13	31138538	31139182	chr13:31138538-31139182	0	-	31138538	31138538	8553170	3	30,120,183,	0,242,461,
#Partially deleted in new
chr13	31153978	31162039	chr13:31153978-31162039	0	-	31153978	31153978	8553170	4	777,141,58,58,	0,1535,4827,8003,
#Partially deleted in new
chr13	31199935	31332276	chr13:31199935-31332276	3	+	31200084	31329668	789624	15	219,50,40,110,77,112,137,64,120,70,114,100,120,145,2776,	0,15115,23016,29249,47087,47919,61010,69278,74573,76766,84712,86784,117630,123815,129565,
#Partially deleted in new
chr13	31260406	31284755	chr13:31260406-31284755	0	+	31260406	31260406	8553170	7	74,137,64,120,70,238,108,	0,539,8807,14102,16295,22662,24241,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	31311288	31312921	chr13:31311288-31312921	7	+	31311288	31311288	16724991	2	364,586,	0,1047,
#Partially deleted in new
chr13	31419988	31437999	chr13:31419988-31437999	3	+	31419988	31419988	8553170	3	89,195,281,	0,17421,17730,
#Partially deleted in new
chr13	31483413	31483699	chr13:31483413-31483699	7	-	31483413	31483413	16724991	1	286,	0,
#Partially deleted in new
chr13	31739541	31803388	chr13:31739541-31803388	3	+	31739612	31802405	0	18	165,147,78,106,72,72,72,72,72,72,72,72,72,72,230,411,219,1243,	0,18716,22182,25495,26414,35078,35776,37834,38970,42129,43134,46841,47024,49580,52264,53136,57659,62604,
#Partially deleted in new
chr13	31739541	31802872	chr13:31739541-31802872	1	+	31739612	31802405	0	17	165,147,78,106,72,72,72,72,72,72,72,72,72,230,411,219,727,	0,18716,22182,25495,26414,35078,35776,37834,38970,42129,46841,47024,49580,52264,53136,57659,62604,
#Partially deleted in new
chr13	31846712	32299105	chr13:31846712-32299105	1	+	32078913	32295460	789624	62	227,173,200,54,140,91,80,81,169,93,99,102,104,109,87,172,133,108,259,183,87,260,190,125,58,92,173,161,111,155,100,172,257,147,169,91,83,151,104,186,199,122,188,95,608,98,171,141,180,162,75,171,201,162,167,190,150,99,84,111,203,3904,	0,99296,232121,255250,270621,277573,277889,278082,284959,288191,288372,290158,300569,301126,303035,308778,310560,314431,324299,326654,328833,331464,332131,332962,336264,337887,338263,339547,340833,347430,355228,355643,362140,362872,364153,365579,372036,377522,378220,379076,381743,384466,387861,389365,390666,392539,392998,397329,400610,402813,405165,407511,414903,415601,418737,420457,428129,429751,431752,442920,447655,448489,
#Partially deleted in new
chr13	31846840	31953472	chr13:31846840-31953472	0	+	31846840	31846840	8553170	4	99,59,173,978,	0,94467,99168,105654,
#Partially deleted in new
chr13	31945825	32299105	chr13:31945825-32299105	1	+	31945976	32295460	789624	61	356,200,54,140,91,80,81,169,93,99,102,104,109,87,172,133,108,259,183,87,260,190,125,58,92,173,161,111,155,100,172,257,147,169,91,83,151,104,186,199,122,188,95,608,98,171,141,180,162,75,171,201,162,167,190,150,99,84,111,203,3904,	0,133008,156137,171508,178460,178776,178969,185846,189078,189259,191045,201456,202013,203922,209665,211447,215318,225186,227541,229720,232351,233018,233849,237151,238774,239150,240434,241720,248317,256115,256530,263027,263759,265040,266466,272923,278409,279107,279963,282630,285353,288748,290252,291553,293426,293885,298216,301497,303700,306052,308398,315790,316488,319624,321344,329016,330638,332639,343807,348542,349376,
#Partially deleted in new
chr13	31946086	31991931	chr13:31946086-31991931	0	+	31946086	31991029	789624	2	95,1033,	0,44812,
#Deleted in new
chr13	31950158	31953441	chr13:31950158-31953441	0	+	31950158	31950158	8553170	1	3283,	0,
#Deleted in new
chr13	31952579	31953361	chr13:31952579-31953361	7	+	31952579	31952579	16724991	1	782,	0,
#Deleted in new
chr13	31960324	31961946	chr13:31960324-31961946	3	-	31960324	31960324	8553170	1	1622,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	32025313	32031639	chr13:32025313-32031639	3	-	32025313	32025313	789624	4	783,51,92,189,	0,1889,2261,6137,
#Partially deleted in new
chr13	32031299	32296613	chr13:32031299-32296613	1	+	32031795	32295460	789624	62	566,200,54,140,91,80,81,169,93,99,102,104,109,87,172,133,108,259,183,87,260,190,125,58,92,173,161,111,155,100,172,110,144,147,169,91,83,151,104,186,199,122,188,95,608,98,171,141,180,162,75,171,201,162,167,190,150,99,84,111,203,1412,	0,47534,70663,86034,92986,93302,93495,100372,103604,103785,105571,115982,116539,118448,124191,125973,129844,139712,142067,144246,146877,147544,148375,151677,153300,153676,154960,156246,162843,170641,171056,177555,177666,178285,179566,180992,187449,192935,193633,194489,197156,199879,203274,204778,206079,207952,208411,212742,216023,218226,220578,222924,230316,231014,234150,235870,243542,245164,247165,258333,263068,263902,
#Partially deleted in new
chr13	32031299	32299122	chr13:32031299-32299122	3	+	32031795	32295460	789624	61	566,200,54,140,91,80,81,169,93,99,102,104,109,87,172,133,108,259,183,87,260,190,125,58,92,173,161,111,155,100,172,257,147,169,91,83,151,104,186,199,122,188,95,608,98,171,141,180,162,75,171,201,162,167,190,150,99,84,111,203,3921,	0,47534,70663,86034,92986,93302,93495,100372,103604,103785,105571,115982,116539,118448,124191,125973,129844,139712,142067,144246,146877,147544,148375,151677,153300,153676,154960,156246,162843,170641,171056,177553,178285,179566,180992,187449,192935,193633,194489,197156,199879,203274,204778,206079,207952,208411,212742,216023,218226,220578,222924,230316,231014,234150,235870,243542,245164,247165,258333,263068,263902,
#Partially deleted in new
chr13	32031299	32296610	chr13:32031299-32296610	1	+	32031795	32295460	789624	62	566,200,54,140,91,80,81,169,93,99,102,104,109,87,172,133,108,259,183,87,260,190,125,58,92,173,161,111,155,100,172,257,147,169,91,83,151,104,186,199,122,188,95,608,98,171,141,180,162,75,171,9,201,162,167,190,150,99,84,111,203,1409,	0,47534,70663,86034,92986,93302,93495,100372,103604,103785,105571,115982,116539,118448,124191,125973,129844,139712,142067,144246,146877,147544,148375,151677,153300,153676,154960,156246,162843,170641,171056,177553,178285,179566,180992,187449,192935,193633,194489,197156,199879,203274,204778,206079,207952,208411,212742,216023,218226,220578,222924,226664,230316,231014,234150,235870,243542,245164,247165,258333,263068,263902,
#Partially deleted in new
chr13	32031554	32038620	chr13:32031554-32038620	0	+	32031554	32031554	8553170	2	311,191,	0,6875,
#Partially deleted in new
chr13	32060863	32117470	chr13:32060863-32117470	0	+	32061102	32117470	789624	4	300,200,54,137,	0,17970,41099,56470,
#Partially deleted in new
chr13	32254147	32262466	chr13:32254147-32262466	0	+	32254147	32254147	8553170	3	247,201,153,	0,7468,8166,
#Partially deleted in new
chr13	32262388	32289639	chr13:32262388-32289639	0	+	32262388	32274869	789624	7	87,167,117,150,99,84,7,	0,3061,4854,12453,14075,16076,27244,
#Partially deleted in new
chr13	32287850	32295503	chr13:32287850-32295503	0	+	32287850	32287850	8553170	4	34,111,203,302,	0,1782,6517,7351,
#Deleted in new
chr13	32298153	32298712	chr13:32298153-32298712	0	+	32298153	32298153	8553170	2	179,258,	0,301,
#Partially deleted in new
chr13	32303699	32315344	chr13:32303699-32315344	3	-	32303878	32311925	789624	6	323,75,93,822,221,30,	0,4986,6939,7572,10630,11615,
#Partially deleted in new
chr13	32303770	32311954	chr13:32303770-32311954	1	-	32303878	32311925	789624	4	252,75,93,683,	0,4915,6868,7501,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr13	32315473	32400266	chr13:32315473-32400266	3	+	32316460	32398770	789624	27	194,106,249,109,50,41,115,50,112,1116,4932,96,70,428,182,188,171,355,156,145,122,199,164,139,245,147,2105,	0,948,3603,9602,10627,10768,11025,13969,15445,16798,20791,29084,31353,39387,40954,42268,47049,47705,54928,55482,61196,63843,64276,64533,79215,81424,82688,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr13	32315479	32399668	chr13:32315479-32399668	1	+	32316460	32398770	789624	28	188,106,249,109,50,41,115,50,112,1116,4932,96,70,428,182,188,171,355,156,145,122,199,164,139,245,147,1049,60,	0,942,3597,9596,10621,10762,11019,13963,15439,16792,20785,29078,31347,39381,40948,42262,47043,47699,54922,55476,61190,63837,64270,64527,79209,81418,82682,84129,
#Partially deleted in new
chr13	32315504	32333291	chr13:32315504-32333291	0	+	32315504	32315504	8553170	10	163,102,249,109,50,41,115,50,112,1020,	0,917,3572,9571,10596,10737,10994,13938,15414,16767,
#Partially deleted in new
chr13	32316460	32362659	chr13:32316460-32362659	0	+	32316460	32316460	8553170	16	67,249,109,50,41,115,50,112,1116,4932,96,70,428,182,188,145,	0,2616,8615,9640,9781,10038,12982,14458,15811,19804,28097,30366,38400,39967,41281,46054,
#Deleted in new
chr13	32384659	32386108	chr13:32384659-32386108	7	+	32384659	32384659	16724991	1	1449,	0,
#Partially deleted in new
chr13	32396808	32398448	chr13:32396808-32398448	0	+	32396808	32396808	8553170	2	236,287,	0,1353,
#Partially deleted in new
chr13	32400722	32428133	chr13:32400722-32428133	1	-	32403143	32428082	789624	5	2478,69,89,128,230,	0,3480,6527,6922,27181,
#Partially deleted in new
chr13	32400723	32428178	chr13:32400723-32428178	3	-	32402941	32428082	789624	5	2477,77,89,128,275,	0,3597,6526,6921,27180,
#Partially deleted in new
chr13	32400723	32428178	chr13:32400723-32428178	1	-	32403143	32428082	789624	6	1178,293,69,89,128,275,	0,2184,3479,6526,6921,27180,
#Partially deleted in new
chr13	32400752	32428014	chr13:32400752-32428014	0	-	32403667	32428014	789624	6	2448,106,77,89,128,111,	0,2903,3568,6497,6892,27151,
#Partially deleted in new
chr13	32401672	32428311	chr13:32401672-32428311	0	-	32411584	32428082	789624	8	1528,77,89,128,65,71,153,408,	0,2648,5577,5972,9855,14286,14878,26231,
#Partially deleted in new
chr13	32401676	32411606	chr13:32401676-32411606	1	-	32402941	32407327	789624	5	1524,77,89,128,79,	0,2644,5573,5968,9851,
#Partially deleted in new
chr13	32401783	32428130	chr13:32401783-32428130	0	-	32407740	32428082	789624	6	1417,77,89,128,71,227,	0,2537,5466,5861,14175,26120,
#Partially deleted in new
chr13	32401815	32428133	chr13:32401815-32428133	1	-	32402941	32428082	789624	6	86,293,77,89,128,230,	0,1092,2505,5434,5829,26088,
#Partially deleted in new
chr13	32401816	32428014	chr13:32401816-32428014	0	-	32401879	32428014	789624	6	85,51,77,89,128,111,	0,1333,2504,5433,5828,26087,
#Partially deleted in new
chr13	32402479	32428130	chr13:32402479-32428130	0	-	32420572	32428082	789624	9	721,77,89,128,65,71,205,206,227,	0,1841,4770,5165,9048,13479,14019,17891,25424,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	32406452	32428006	chr13:32406452-32428006	0	-	32406452	32406452	8553170	2	1320,103,	0,21451,
#Deleted in new
chr13	32420389	32420516	chr13:32420389-32420516	3	-	32420389	32420389	8553170	1	127,	0,
#Deleted in new
chr13	32424921	32428014	chr13:32424921-32428014	0	-	32425828	32428014	789624	2	1034,111,	0,2982,
#Partially deleted in new
chr13	32425357	32432954	chr13:32425357-32432954	3	-	32425357	32425357	8553170	2	598,166,	0,7431,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	32432416	32480638	chr13:32432416-32480638	0	-	32432416	32432416	8553170	8	556,45,86,1739,122,162,48,49,	0,3944,6235,9971,13942,45470,45811,48173,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr13	32432488	32538885	chr13:32432488-32538885	1	-	32436381	32527509	789624	10	484,45,86,1739,147,77,89,75,67,108,	0,3872,6163,9899,85368,88884,89693,94969,106129,106289,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr13	32432488	32538885	chr13:32432488-32538885	1	-	32436381	32537027	789624	10	484,45,86,1739,147,77,89,75,22,108,	0,3872,6163,9899,85368,88884,89693,94969,104517,106289,
#Partially deleted in new
chr13	32432786	32490140	chr13:32432786-32490140	0	-	32432786	32432786	8553170	7	186,45,86,1739,162,48,49,	0,3574,5865,9601,45100,47803,57305,
#Partially deleted in new
chr13	32432786	32538686	chr13:32432786-32538686	1	-	32436381	32527509	789624	9	186,45,86,1739,147,77,89,75,69,	0,3574,5865,9601,85070,88586,89395,94671,105831,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	32432830	32522275	chr13:32432830-32522275	0	-	32432830	32432830	8553170	6	142,45,86,1737,147,903,	0,3530,5821,9557,85026,88542,
#Partially deleted in new
chr13	32432890	32537027	chr13:32432890-32537027	1	-	32436381	32537027	789624	9	82,45,86,161,147,77,89,125,1259,	0,3470,5761,9497,84966,88482,89291,94517,102878,
#Partially deleted in new
chr13	32443696	32538833	chr13:32443696-32538833	0	-	32443696	32537027	789624	7	430,147,77,89,125,1259,216,	0,74160,77676,78485,83711,92072,94921,
#Partially deleted in new
chr13	32443965	32517920	chr13:32443965-32517920	0	-	32443965	32443965	8553170	3	161,48,64,	0,36624,73891,
#Deleted in new
chr13	32477273	32478841	chr13:32477273-32478841	7	+	32477273	32477273	16724991	1	1568,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	32504505	32509395	chr13:32504505-32509395	3	-	32504505	32504505	789624	1	4890,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	32510291	32538782	chr13:32510291-32538782	3	-	32517801	32537027	789624	6	7712,77,89,125,1259,165,	0,11081,11890,17116,25477,28326,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	32516893	32525579	chr13:32516893-32525579	0	-	32516893	32516893	8553170	2	1110,4207,	0,4479,
#Partially deleted in new
chr13	32517487	32538792	chr13:32517487-32538792	0	-	32517487	32517487	8553170	3	516,125,175,	0,9920,21130,
#Partially deleted in new
chr13	32517874	32535869	chr13:32517874-32535869	0	-	32517874	32517874	8553170	4	129,89,125,101,	0,4307,9533,17894,
#Partially deleted in new
chr13	32526874	32536383	chr13:32526874-32536383	0	-	32526874	32526874	8553170	2	658,615,	0,8894,
#Partially deleted in new
chr13	32536426	32538825	chr13:32536426-32538825	0	-	32536426	32536426	8553170	3	601,67,48,	0,2191,2351,
#Partially deleted in new
chr13	32586426	32778019	chr13:32586426-32778019	3	+	32648772	32775052	0	35	167,127,204,87,98,127,81,141,116,95,146,152,114,82,49,140,116,106,161,124,159,69,137,124,205,115,133,120,63,146,106,440,108,136,3003,	0,62327,65377,71812,72007,72727,81337,86789,89417,92408,97451,100707,102029,107796,110427,113303,114896,120507,123519,145674,148745,154653,156164,159550,166905,169415,171660,172107,173201,174148,178062,183694,184227,186762,188590,
#Partially deleted in new
chr13	32586454	32658349	chr13:32586454-32658349	0	+	32586454	32586454	8553170	4	139,127,204,111,	0,62299,65349,71784,
#Partially deleted in new
chr13	32586542	32691268	chr13:32586542-32691268	0	+	32586542	32586542	8553170	13	51,127,204,87,98,127,81,141,116,95,146,152,2813,	0,62211,65261,71696,71891,72611,81221,86673,89301,92292,97335,100591,101913,
#Partially deleted in new
chr13	32586547	32775908	chr13:32586547-32775908	0	+	32648772	32770765	0	34	46,127,204,87,98,127,81,141,116,95,146,152,114,82,49,140,116,106,161,124,159,69,137,124,205,115,133,120,63,146,106,440,225,892,	0,62206,65256,71691,71886,72606,81216,86668,89296,92287,97330,100586,101908,107675,110306,113182,114775,120386,123398,145553,148624,154532,156043,159429,166784,169294,171539,171986,173080,174027,177941,183573,184106,188469,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	32586550	32652605	chr13:32586550-32652605	0	+	32586550	32586550	8553170	3	43,127,802,	0,62203,65253,
#Partially deleted in new
chr13	32586568	32650617	chr13:32586568-32650617	0	+	32586568	32586568	8553170	2	25,1864,	0,62185,
#Partially deleted in new
chr13	32700983	32710068	chr13:32700983-32710068	0	+	32700983	32700983	8553170	3	455,106,123,	0,5950,8962,
#Partially deleted in new
chr13	32758168	32770546	chr13:32758168-32770546	0	+	32758168	32770546	789624	6	51,120,63,146,100,426,	0,365,1459,2406,6320,11952,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	32763437	32763552	chr13:32763437-32763552	3	-	32763437	32763437	8553170	1	115,	0,
#Deleted in new
chr13	32770189	32771079	chr13:32770189-32771079	0	+	32770189	32770189	8553170	2	371,426,	0,464,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	32782873	32788178	chr13:32782873-32788178	3	+	32782873	32782873	8553170	1	5305,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	32877430	32911650	chr13:32877430-32911650	3	-	32877430	32877430	789624	4	67,124,84,628,	0,29463,33206,33592,
#Deleted in new
chr13	32954056	32954401	chr13:32954056-32954401	7	-	32954056	32954056	16724991	1	345,	0,
#Partially deleted in new
chr13	33016432	33066145	chr13:33016432-33066145	3	+	33016440	33064186	0	5	827,511,269,1102,2297,	0,37334,38614,44246,47416,
#Partially deleted in new
chr13	33016432	33064303	chr13:33016432-33064303	0	+	33016432	33016432	8553170	5	827,511,319,1102,455,	0,37334,38614,44246,47416,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr13	33103134	33285755	chr13:33103134-33285755	3	-	33105592	33285638	0	14	2576,177,218,222,115,211,199,160,174,1361,64,82,72,286,	0,3623,6738,7551,8643,9586,14930,22946,24238,25794,39175,62202,64416,182335,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr13	33103169	33186079	chr13:33103169-33186079	1	-	33105592	33186022	0	14	2541,177,218,222,115,211,199,160,174,1361,64,82,72,202,	0,3588,6703,7516,8608,9551,14895,22911,24203,25759,39140,62167,64381,82708,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr13	33103169	33206006	chr13:33103169-33206006	1	-	33105592	33142342	0	14	2541,177,218,222,115,211,199,160,174,1361,64,82,72,188,	0,3588,6703,7516,8608,9551,14895,22911,24203,25759,39140,62167,64381,102649,
#Deleted in new
chr13	33111783	33113193	chr13:33111783-33113193	0	-	33111783	33111783	8553170	2	109,473,	0,937,
#Partially deleted in new
chr13	33127429	33350630	chr13:33127429-33350630	0	-	33127429	33350413	789624	6	117,1361,64,82,72,341,	0,1499,14880,37907,40121,222860,
#Partially deleted in new
chr13	33138428	33285755	chr13:33138428-33285755	0	-	33138428	33138428	8553170	5	435,64,82,72,286,	0,3881,26908,29122,147041,
#Partially deleted in new
chr13	33155435	33285707	chr13:33155435-33285707	0	-	33155435	33155435	8553170	4	176,82,72,238,	0,9901,12115,130034,
#Partially deleted in new
chr13	33158586	33164409	chr13:33158586-33164409	3	-	33158586	33158586	8553170	2	192,260,	0,5563,
#Partially deleted in new
chr13	33180400	33281238	chr13:33180400-33281238	0	+	33180400	33180400	8553170	6	125,101,123,257,124,210,	0,7756,93535,97039,99132,100628,
#Partially deleted in new
chr13	33271378	33281238	chr13:33271378-33281238	0	+	33271378	33271378	8553170	5	183,123,257,124,210,	0,2557,6061,8154,9650,
#Partially deleted in new
chr13	33271385	33281265	chr13:33271385-33281265	0	+	33271385	33271385	8553170	4	176,257,196,237,	0,6054,8075,9643,
#Partially deleted in new
chr13	33271385	33281093	chr13:33271385-33281093	0	+	33271385	33271385	8553170	4	197,257,196,65,	0,6054,8075,9643,
#Partially deleted in new
chr13	33271386	33281265	chr13:33271386-33281265	0	+	33271386	33271386	8553170	7	175,289,123,164,136,196,237,	0,1219,2549,4300,6053,8074,9642,
#Partially deleted in new
chr13	33271395	33281147	chr13:33271395-33281147	1	+	33271395	33271395	8553170	5	187,123,257,196,119,	0,2540,6044,8065,9633,
#Partially deleted in new
chr13	33271401	33279620	chr13:33271401-33279620	0	+	33271401	33271401	8553170	4	181,164,257,160,	0,4285,6038,8059,
#Partially deleted in new
chr13	33271401	33279500	chr13:33271401-33279500	0	+	33271401	33271401	8553170	4	160,289,257,40,	0,1204,6038,8059,
#Partially deleted in new
chr13	33271401	33275847	chr13:33271401-33275847	0	+	33271401	33271401	8553170	4	181,289,123,161,	0,1204,2534,4285,
#Partially deleted in new
chr13	33271413	33277624	chr13:33271413-33277624	0	+	33271413	33271413	8553170	4	148,289,123,185,	0,1192,2522,6026,
#Partially deleted in new
chr13	33271417	33281227	chr13:33271417-33281227	0	+	33271417	33271417	8553170	4	165,257,124,199,	0,6022,8115,9611,
#Partially deleted in new
chr13	33271418	33281265	chr13:33271418-33281265	0	+	33271418	33271418	8553170	4	143,257,124,237,	0,6021,8114,9610,
#Partially deleted in new
chr13	33271436	33277647	chr13:33271436-33277647	0	+	33271436	33271436	8553170	5	125,123,164,113,208,	0,2499,4250,4640,6003,
#Partially deleted in new
chr13	33271436	33281114	chr13:33271436-33281114	0	+	33271436	33271436	8553170	6	125,41,69,257,196,86,	0,2499,4345,6003,8024,9592,
#Partially deleted in new
chr13	33271436	33277640	chr13:33271436-33277640	1	+	33271436	33271436	8553170	5	146,41,139,77,201,	0,2499,4275,5234,6003,
#Partially deleted in new
chr13	33271436	33276121	chr13:33271436-33276121	0	+	33271436	33271436	8553170	2	125,435,	0,4250,
#Partially deleted in new
chr13	33271436	33281262	chr13:33271436-33281262	0	+	33271436	33271436	8553170	5	125,41,164,257,234,	0,2499,4250,6003,9592,
#Partially deleted in new
chr13	33271436	33281100	chr13:33271436-33281100	1	+	33271436	33271436	8553170	6	125,164,113,257,124,72,	0,4250,4640,6003,8096,9592,
#Partially deleted in new
chr13	33271436	33281263	chr13:33271436-33281263	0	+	33271436	33271436	8553170	4	125,257,38,235,	0,6003,8096,9592,
#Partially deleted in new
chr13	33271436	33281201	chr13:33271436-33281201	0	+	33271436	33271436	8553170	5	125,123,397,124,173,	0,2499,5863,8096,9592,
#Partially deleted in new
chr13	33271436	33281169	chr13:33271436-33281169	1	+	33271436	33271436	8553170	5	125,123,397,196,141,	0,2499,5863,8024,9592,
#Partially deleted in new
chr13	33271436	33281098	chr13:33271436-33281098	1	+	33271436	33271436	8553170	6	125,123,257,110,180,70,	0,2499,6003,8024,8460,9592,
#Partially deleted in new
chr13	33271436	33281584	chr13:33271436-33281584	2	+	33271436	33271436	8553170	5	125,123,164,257,556,	0,2499,4250,6003,9592,
#Partially deleted in new
chr13	33271436	33281264	chr13:33271436-33281264	0	+	33271436	33271436	8553170	5	125,123,257,110,236,	0,2499,6003,8024,9592,
#Partially deleted in new
chr13	33271436	33281257	chr13:33271436-33281257	0	+	33271436	33271436	8553170	4	125,257,180,229,	0,6003,8460,9592,
#Partially deleted in new
chr13	33271442	33281238	chr13:33271442-33281238	0	+	33271442	33271442	8553170	4	119,164,257,210,	0,4244,5997,9586,
#Partially deleted in new
chr13	33271443	33276169	chr13:33271443-33276169	1	+	33271443	33271443	8553170	5	118,289,123,164,93,	0,1162,2492,4243,4633,
#Partially deleted in new
chr13	33271446	33281242	chr13:33271446-33281242	0	+	33271446	33271446	8553170	4	115,397,196,214,	0,5853,8014,9582,
#Partially deleted in new
chr13	33271449	33281265	chr13:33271449-33281265	0	+	33271449	33271449	8553170	4	112,212,196,237,	0,6035,8011,9579,
#Partially deleted in new
chr13	33271503	33277825	chr13:33271503-33277825	0	+	33271503	33271503	8553170	4	58,123,164,386,	0,2432,4183,5936,
#Partially deleted in new
chr13	33272512	33277644	chr13:33272512-33277644	1	+	33272512	33272512	8553170	4	382,123,69,205,	0,1423,3269,4927,
#Partially deleted in new
chr13	33272551	33281265	chr13:33272551-33281265	0	+	33272551	33272551	8553170	5	242,123,164,257,237,	0,1384,3135,4888,8477,
#Partially deleted in new
chr13	33275950	33285736	chr13:33275950-33285736	0	-	33275950	33275950	8553170	2	257,267,	0,9519,
#Deleted in new
chr13	33277552	33280029	chr13:33277552-33280029	0	+	33277552	33277552	8553170	2	144,569,	0,1908,
#Deleted in new
chr13	33277552	33281322	chr13:33277552-33281322	0	+	33277552	33277552	8553170	4	144,196,131,294,	0,1908,3237,3476,
#Deleted in new
chr13	33277552	33280282	chr13:33277552-33280282	0	+	33277552	33277552	8553170	2	144,750,	0,1980,
#Deleted in new
chr13	33277552	33281218	chr13:33277552-33281218	0	+	33277552	33277552	8553170	5	144,174,124,180,190,	0,943,1980,2344,3476,
#Deleted in new
chr13	33277552	33281334	chr13:33277552-33281334	0	+	33277552	33277552	789624	3	144,196,306,	0,1908,3476,
#Deleted in new
chr13	33277552	33281294	chr13:33277552-33281294	0	+	33277552	33277552	8553170	4	144,294,196,266,	0,823,1908,3476,
#Deleted in new
chr13	33277552	33281334	chr13:33277552-33281334	0	+	33277552	33277552	8553170	2	144,306,	0,3476,
#Deleted in new
chr13	33277552	33281322	chr13:33277552-33281322	1	+	33277552	33277552	8553170	5	144,184,180,57,294,	0,1920,2344,2870,3476,
#Deleted in new
chr13	33277552	33280055	chr13:33277552-33280055	0	+	33277552	33277552	8553170	4	144,294,196,159,	0,823,1908,2344,
#Deleted in new
chr13	33277552	33281078	chr13:33277552-33281078	0	+	33277552	33277552	8553170	5	144,196,180,161,50,	0,1908,2344,2870,3476,
#Deleted in new
chr13	33277552	33281322	chr13:33277552-33281322	0	+	33277552	33277552	8553170	4	144,196,180,294,	0,1908,2344,3476,
#Deleted in new
chr13	33277552	33281334	chr13:33277552-33281334	0	+	33277552	33277552	8553170	3	144,110,306,	0,1908,3476,
#Deleted in new
chr13	33277552	33279997	chr13:33277552-33279997	0	+	33277552	33277552	8553170	2	144,465,	0,1980,
#Deleted in new
chr13	33277552	33281282	chr13:33277552-33281282	0	+	33277552	33277552	8553170	4	144,174,196,254,	0,943,1908,3476,
#Deleted in new
chr13	33277552	33281322	chr13:33277552-33281322	0	+	33277552	33277552	8553170	4	144,124,180,294,	0,1980,2344,3476,
#Deleted in new
chr13	33277552	33281334	chr13:33277552-33281334	0	+	33277552	33277552	8553170	3	144,124,306,	0,1980,3476,
#Deleted in new
chr13	33333678	33335277	chr13:33333678-33335277	3	-	33333678	33333678	8553170	2	371,273,	0,1326,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	33335496	33349619	chr13:33335496-33349619	3	+	33335496	33335496	8553170	6	127,272,92,179,168,474,	0,4273,10603,12457,12935,13649,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	33336215	33336716	chr13:33336215-33336716	3	-	33336215	33336215	8553170	1	501,	0,
#Deleted in new
chr13	33348606	33350624	chr13:33348606-33350624	1	-	33349148	33350413	789624	2	610,335,	0,1683,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	33355205	33676768	chr13:33355205-33676768	3	-	33355205	33355205	8553170	6	461,123,48,34,135,91,	0,4259,28426,84485,169032,321472,
#Partially deleted in new
chr13	33511329	33524322	chr13:33511329-33524322	0	-	33511329	33511329	8553170	3	78,192,85,	0,8628,12908,
#Deleted in new
chr13	33610966	33611522	chr13:33610966-33611522	3	+	33610966	33610966	8553170	2	53,332,	0,224,
#Partially deleted in new
chr13	33654658	33676724	chr13:33654658-33676724	1	-	33654658	33654658	8553170	4	175,131,67,47,	0,2153,6618,22019,
#Partially deleted in new
chr13	33818048	33837496	chr13:33818048-33837496	3	+	33818178	33836295	789624	9	217,138,68,98,182,137,99,70,1393,	0,3083,5868,7740,11787,12670,13207,17099,18055,
#Partially deleted in new
chr13	33818068	33966558	chr13:33818068-33966558	1	+	33818178	33966125	789624	9	197,138,68,98,182,137,99,70,472,	0,3063,5848,7720,11767,12650,13187,17079,148018,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	33829538	33829649	chr13:33829538-33829649	3	-	33829538	33829538	8553170	1	111,	0,
#Partially deleted in new
chr13	33830751	33966425	chr13:33830751-33966425	0	+	33830751	33966125	789624	4	104,99,70,339,	0,504,4396,135335,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	33846189	33850825	chr13:33846189-33850825	3	+	33846189	33846189	8553170	1	4636,	0,
#Deleted in new
chr13	34079410	34080134	chr13:34079410-34080134	3	+	34079410	34079410	8553170	1	724,	0,
#Deleted in new
chr13	34082428	34083310	chr13:34082428-34083310	7	-	34082428	34082428	16724991	1	882,	0,
#Deleted in new
chr13	34100710	34100838	chr13:34100710-34100838	3	-	34100710	34100710	8553170	1	128,	0,
#Partially deleted in new
chr13	34262862	34263090	chr13:34262862-34263090	7	+	34262862	34262862	16724991	1	228,	0,
#Partially deleted in new
chr13	34348042	34614170	chr13:34348042-34614170	3	+	34348042	34348042	8553170	4	82,88,144,259,	0,81424,260433,265869,
#Partially deleted in new
chr13	34435449	34640685	chr13:34435449-34640685	0	-	34435449	34435449	789624	3	195,118,81,	0,98838,205155,
#Deleted in new
chr13	34533845	34534350	chr13:34533845-34534350	3	-	34533845	34533845	8553170	2	350,63,	0,442,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	34545928	34671182	chr13:34545928-34671182	3	-	34545928	34545928	8553170	2	90,183,	0,125071,
#Deleted in new
chr13	34574203	34574666	chr13:34574203-34574666	7	-	34574203	34574203	16724991	1	463,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	34910544	34910815	chr13:34910544-34910815	3	-	34910544	34910544	8553170	1	271,	0,
#Deleted in new
chr13	34925833	34928076	chr13:34925833-34928076	3	-	34925833	34925833	8553170	1	2243,	0,
#Partially deleted in new
chr13	34942286	35672735	chr13:34942286-35672735	3	+	34942820	35670991	0	58	828,232,101,96,122,127,120,147,198,134,109,153,169,80,63,98,93,109,82,124,193,1017,218,154,9,181,131,108,169,96,439,155,127,128,62,65,109,167,125,144,137,118,103,116,113,141,120,153,168,90,193,72,156,171,102,197,152,1835,	0,98646,102660,103019,106276,107982,113723,116430,127621,128432,156010,167003,168523,175127,175941,176090,181195,199982,213487,213796,214791,216729,219463,222069,226700,228985,231177,234709,240073,241689,253577,266413,268766,290205,348102,367241,406821,409870,489982,509805,530113,608190,608643,612700,624618,641611,651041,664139,685794,703972,707368,709518,712568,713292,722798,725087,726081,728614,
#Partially deleted in new
chr13	34942318	35672735	chr13:34942318-35672735	1	+	34942820	35670991	789624	58	45,455,232,101,96,122,127,120,147,198,134,109,153,169,80,63,98,93,109,82,124,193,1017,218,163,184,131,108,169,96,439,155,127,128,62,65,109,167,125,144,137,118,103,116,113,141,120,153,168,90,193,72,156,171,102,197,152,1835,	0,341,98614,102628,102987,106244,107950,113691,116398,127589,128400,155978,166971,168491,175095,175909,176058,181163,199950,213455,213764,214759,216697,219431,222037,228950,231145,234677,240041,241657,253545,266381,268734,290173,348070,367209,406789,409838,489950,509773,530081,608158,608611,612668,624586,641579,651009,664107,685762,703940,707336,709486,712536,713260,722766,725055,726049,728582,
#Partially deleted in new
chr13	34942318	35672735	chr13:34942318-35672735	1	+	34942820	35670991	789624	59	45,455,232,101,96,122,127,120,147,198,134,109,153,169,80,63,98,93,109,82,124,193,1017,218,158,5,181,131,108,169,96,439,155,127,128,62,65,109,167,125,144,137,118,103,116,113,141,120,153,168,90,193,72,156,171,102,197,152,1835,	0,341,98614,102628,102987,106244,107950,113691,116398,127589,128400,155978,166971,168491,175095,175909,176058,181163,199950,213455,213764,214759,216697,219431,222037,228772,228953,231145,234677,240041,241657,253545,266381,268734,290173,348070,367209,406789,409838,489950,509773,530081,608158,608611,612668,624586,641579,651009,664107,685762,703940,707336,709486,712536,713260,722766,725055,726049,728582,
#Partially deleted in new
chr13	34942659	35672736	chr13:34942659-35672736	1	+	34942820	35670991	789624	57	455,232,101,96,122,127,120,147,198,134,109,153,169,80,63,98,93,109,82,124,193,1017,218,154,181,131,108,169,96,439,155,127,128,62,65,109,167,125,144,137,118,103,116,113,141,120,153,168,90,193,72,156,171,102,197,152,1836,	0,98273,102287,102646,105903,107609,113350,116057,127248,128059,155637,166630,168150,174754,175568,175717,180822,199609,213114,213423,214418,216356,219090,221696,228612,230804,234336,239700,241316,253204,266040,268393,289832,347729,366868,406448,409497,489609,509432,529740,607817,608270,612327,624245,641238,650668,663766,685421,703599,706995,709145,712195,712919,722425,724714,725708,728241,
#Deleted in new
chr13	35069951	35070965	chr13:35069951-35070965	0	+	35069951	35069951	8553170	2	154,247,	0,767,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	35185293	35186679	chr13:35185293-35186679	7	+	35185293	35185293	16724991	2	726,334,	0,1052,
#Deleted in new
chr13	35251069	35251829	chr13:35251069-35251829	7	+	35251069	35251069	16724991	1	760,	0,
#Deleted in new
chr13	35474181	35477209	chr13:35474181-35477209	3	-	35475058	35476138	0	1	3028,	0,
#Partially deleted in new
chr13	35476748	35672735	chr13:35476748-35672735	1	+	35550512	35670991	0	18	89,118,103,116,113,141,120,153,168,90,193,72,156,171,102,197,152,1835,	0,73728,74181,78238,90156,107149,116579,129677,151332,169510,172906,175056,178106,178830,188336,190625,191619,194152,
#Partially deleted in new
chr13	35593005	35672735	chr13:35593005-35672735	1	+	35606458	35670991	0	13	442,153,168,63,90,193,72,156,171,102,197,152,1835,	0,13420,35075,52863,53253,56649,58799,61849,62573,72079,74368,75362,77895,
#Deleted in new
chr13	35671049	35673022	chr13:35671049-35673022	0	+	35671049	35671049	8553170	2	185,225,	0,1748,
#Partially deleted in new
chr13	35697523	35699001	chr13:35697523-35699001	0	+	35697523	35697523	789624	2	113,263,	0,1215,
#Partially deleted in new
chr13	35697726	35699256	chr13:35697726-35699256	3	+	35697726	35697726	789624	2	125,518,	0,1012,
#Partially deleted in new
chr13	35768651	35855861	chr13:35768651-35855861	1	-	35774641	35855528	0	14	6048,74,114,81,97,78,134,147,120,58,109,85,95,352,	0,19560,24714,37047,39572,40366,42183,54077,58983,59598,67381,70440,85847,86858,
#Partially deleted in new
chr13	35768962	36131306	chr13:35768962-36131306	1	-	35774534	36126137	0	17	5737,114,81,97,78,134,147,120,58,109,85,95,117,100,347,395,193,	0,24403,36736,39261,40055,41872,53766,58672,59287,67070,70129,85536,102261,178395,342906,356799,362151,
#Partially deleted in new
chr13	35771338	35855642	chr13:35771338-35855642	1	-	35774534	35855528	0	13	3361,114,81,97,78,134,147,120,58,109,85,95,133,	0,22027,34360,36885,37679,39496,51390,56296,56911,64694,67753,83160,84171,
#Partially deleted in new
chr13	35771340	36131306	chr13:35771340-36131306	3	-	35774641	36126137	0	18	3359,74,114,81,97,78,134,147,120,58,109,85,95,117,100,347,395,193,	0,16871,22025,34358,36883,37677,39494,51388,56294,56909,64692,67751,83158,99883,176017,340528,354421,359773,
#Deleted in new
chr13	35787857	35793479	chr13:35787857-35793479	0	-	35787857	35787857	8553170	2	428,114,	0,5508,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	35805315	35808337	chr13:35805315-35808337	0	-	35805315	35805315	8553170	2	464,114,	0,2908,
#Deleted in new
chr13	35845899	35855784	chr13:35845899-35855784	0	-	35845899	35845899	8553170	3	4877,95,275,	0,8599,9610,
#Partially deleted in new
chr13	35849922	36131306	chr13:35849922-36131306	1	-	35850719	36126137	789624	7	854,95,117,100,347,395,193,	0,4576,21301,97435,261946,275839,281191,
#Partially deleted in new
chr13	36168207	36214615	chr13:36168207-36214615	3	-	36169033	36214526	789624	11	847,257,119,92,148,111,100,105,62,215,137,	0,2323,5484,6268,6514,21738,23587,25413,25598,33671,46271,
#Partially deleted in new
chr13	36168793	36297842	chr13:36168793-36297842	3	-	36169033	36283606	789624	16	261,257,119,92,148,111,100,105,62,215,34,77,54,99,111,206,	0,1737,4898,5682,5928,21152,23001,24827,25012,33085,58554,79812,85009,85251,114798,128843,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	36181991	36214588	chr13:36181991-36214588	1	-	36183160	36214526	789624	7	1206,111,100,105,62,215,110,	0,7954,9803,11629,11814,19887,32487,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	36222007	36297824	chr13:36222007-36297824	1	-	36227200	36283477	789624	7	5374,77,54,99,41,111,188,	0,26598,31795,32037,61461,61584,75629,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr13	36227044	36297840	chr13:36227044-36297840	0	-	36227044	36227044	8553170	9	337,157,77,54,99,226,41,111,204,	0,17412,21561,26758,27000,47257,56424,56547,70592,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	36227119	36297749	chr13:36227119-36297749	1	-	36227200	36283606	789624	6	262,77,54,99,111,113,	0,21486,26683,26925,56472,70517,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	36227119	36297749	chr13:36227119-36297749	1	-	36227200	36283477	789624	7	262,77,54,99,37,111,113,	0,21486,26683,26925,56349,56472,70517,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	36227119	36297749	chr13:36227119-36297749	1	-	36227200	36297719	789624	8	262,77,54,99,41,111,80,113,	0,21486,26683,26925,56349,56472,68658,70517,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	36227119	36297749	chr13:36227119-36297749	0	-	36240629	36283477	789624	8	262,97,77,54,99,41,111,113,	0,13450,21486,26683,26925,56349,56472,70517,
#Partially deleted in new
chr13	36230774	36297824	chr13:36230774-36297824	1	-	36231192	36283477	789624	7	518,77,54,99,41,111,188,	0,17831,23028,23270,52694,52817,66862,
#Partially deleted in new
chr13	36231161	36297751	chr13:36231161-36297751	3	-	36231192	36297719	789624	8	131,77,54,99,41,111,80,115,	0,17444,22641,22883,52307,52430,64616,66475,
#Partially deleted in new
chr13	36231161	36297751	chr13:36231161-36297751	1	-	36231192	36283477	789624	7	131,77,54,99,37,111,115,	0,17444,22641,22883,52307,52430,66475,
#Partially deleted in new
chr13	36248589	36297836	chr13:36248589-36297836	0	-	36248589	36248589	8553170	3	93,111,200,	0,35002,49047,
#Partially deleted in new
chr13	36248601	36297832	chr13:36248601-36297832	0	-	36248601	36248601	8553170	5	81,54,99,111,196,	0,5201,5443,34990,49035,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	36267167	36267274	chr13:36267167-36267274	3	+	36267167	36267167	8553170	1	107,	0,
#Partially deleted in new
chr13	36280056	36297832	chr13:36280056-36297832	0	-	36280056	36280056	8553170	5	1204,41,111,80,196,	0,3412,3535,15721,17580,
#Partially deleted in new
chr13	36282827	36297837	chr13:36282827-36297837	0	-	36282827	36282827	8553170	3	579,107,201,	0,764,14809,
#Partially deleted in new
chr13	36301637	36346283	chr13:36301637-36346283	1	-	36304364	36335830	0	9	2995,91,159,195,124,156,198,812,59,	0,10507,10681,12589,24937,27724,29761,33383,44587,
#Partially deleted in new
chr13	36301639	36370180	chr13:36301639-36370180	3	-	36304364	36335830	0	9	2993,91,159,195,124,156,198,812,92,	0,10505,10679,12587,24935,27722,29759,33381,68449,
#Partially deleted in new
chr13	36301639	36346797	chr13:36301639-36346797	1	-	36304364	36335830	0	9	2993,91,159,195,124,156,198,812,216,	0,10505,10679,12587,24935,27722,29759,33381,44942,
#Partially deleted in new
chr13	36303601	36346493	chr13:36303601-36346493	1	-	36304364	36335830	0	10	1031,91,159,195,124,156,198,812,72,180,	0,8543,8717,10625,22973,25760,27797,31419,32685,42712,
#Partially deleted in new
chr13	36304321	36312584	chr13:36304321-36312584	0	-	36304321	36304321	8553170	3	311,91,266,	0,7823,7997,
#Partially deleted in new
chr13	36304450	36312411	chr13:36304450-36312411	0	-	36304450	36304450	8553170	4	182,26,91,93,	0,3968,7694,7868,
#Partially deleted in new
chr13	36304456	36326623	chr13:36304456-36326623	0	-	36304456	36304456	8553170	5	176,91,159,200,49,	0,7688,7862,9765,22118,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	36312141	36314441	chr13:36312141-36314441	0	-	36312141	36312141	8553170	4	94,159,115,215,	0,177,1826,2085,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	36325922	36346283	chr13:36325922-36346283	0	-	36325922	36325922	8553170	5	776,156,198,812,59,	0,3439,5476,9098,20302,
#Partially deleted in new
chr13	36335232	36346777	chr13:36335232-36346777	0	-	36335232	36335232	8553170	2	600,196,	0,11349,
#Partially deleted in new
chr13	36335580	36345634	chr13:36335580-36345634	0	-	36335580	36335580	8553170	2	252,110,	0,9944,
#Partially deleted in new
chr13	36346430	36369601	chr13:36346430-36369601	0	+	36346430	36346430	789624	5	77,105,114,146,114,	0,19069,19299,21767,23057,
#Partially deleted in new
chr13	36346431	36368410	chr13:36346431-36368410	0	+	36346431	36346431	8553170	4	76,105,114,213,	0,19068,19298,21766,
#Partially deleted in new
chr13	36346431	36369525	chr13:36346431-36369525	3	+	36346431	36346431	789624	6	76,87,105,114,146,38,	0,14222,19068,19298,21766,23056,
#Partially deleted in new
chr13	36431519	36442869	chr13:36431519-36442869	3	+	36433056	36442665	789624	9	257,189,247,125,224,205,114,134,256,	0,1513,6109,6547,7124,8459,9598,10651,11094,
#Partially deleted in new
chr13	36431902	36442869	chr13:36431902-36442869	1	+	36433056	36442665	789624	9	264,189,247,125,224,205,114,134,256,	0,1130,5726,6164,6741,8076,9215,10268,10711,
#Partially deleted in new
chr13	36432357	36442882	chr13:36432357-36442882	1	+	36432621	36442665	789624	9	372,189,247,125,224,205,114,134,269,	0,675,5271,5709,6286,7621,8760,9813,10256,
#Partially deleted in new
chr13	36432522	36442870	chr13:36432522-36442870	1	+	36432621	36442665	789624	9	207,186,247,125,224,205,114,134,257,	0,513,5106,5544,6121,7456,8595,9648,10091,
#Deleted in new
chr13	36490077	36490441	chr13:36490077-36490441	7	-	36490077	36490077	16724991	1	364,	0,
#Partially deleted in new
chr13	36673911	36697839	chr13:36673911-36697839	3	+	36695078	36695402	789624	2	273,2934,	0,20994,
#Deleted in new
chr13	36740040	36740863	chr13:36740040-36740863	7	+	36740040	36740040	16724991	1	823,	0,
#Deleted in new
chr13	36741877	36742465	chr13:36741877-36742465	7	-	36741877	36741877	16724991	1	588,	0,
#Partially deleted in new
chr13	36789331	36794930	chr13:36789331-36794930	7	+	36789331	36789331	16724991	3	171,100,149,	0,3295,5450,
#Partially deleted in new
chr13	36794483	36795050	chr13:36794483-36795050	5	+	36794483	36794483	16724991	2	211,269,	0,298,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	36804197	36805302	chr13:36804197-36805302	7	-	36804197	36804197	16724991	1	1105,	0,
#Partially deleted in new
chr13	36819223	36829104	chr13:36819223-36829104	3	+	36819357	36827753	0	3	734,108,1462,	0,6204,8419,
#Partially deleted in new
chr13	36825425	36829097	chr13:36825425-36829097	0	+	36825425	36825425	8553170	4	110,107,23,294,	0,2217,2910,3378,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	36844830	36920238	chr13:36844830-36920238	1	-	36848675	36879689	789624	6	3989,257,222,258,598,123,	0,8588,20706,27827,34447,75285,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	36844830	36920272	chr13:36844830-36920272	3	-	36848675	36879689	789624	7	3989,257,222,111,258,598,157,	0,8588,20706,22442,27827,34447,75285,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	36844830	36879829	chr13:36844830-36879829	1	-	36848675	36879689	789624	6	3989,257,222,111,258,552,	0,8588,20706,22442,27827,34447,
#Deleted in new
chr13	36849365	36850046	chr13:36849365-36850046	3	-	36849365	36849365	8553170	2	397,107,	0,574,
#Partially deleted in new
chr13	36879461	36920765	chr13:36879461-36920765	0	-	36879461	36879461	8553170	2	414,131,	0,41173,
#Deleted in new
chr13	36922538	36922908	chr13:36922538-36922908	7	+	36922538	36922538	16724991	1	370,	0,
#Partially deleted in new
chr13	36926437	36927219	chr13:36926437-36927219	7	-	36926437	36926437	16724991	2	380,92,	0,690,
#Deleted in new
chr13	36938399	36939494	chr13:36938399-36939494	7	-	36938399	36938399	16724991	1	1095,	0,
#Partially deleted in new
chr13	36949774	36999367	chr13:36949774-36999367	1	-	36949941	36999300	789624	9	283,86,152,60,114,72,47,172,133,	0,2739,15800,22202,35852,39709,45214,45650,49460,
#Partially deleted in new
chr13	36949829	36999367	chr13:36949829-36999367	3	-	36949941	36999300	789624	10	228,86,152,60,114,93,69,47,172,133,	0,2684,15745,22147,35797,39654,43774,45159,45595,49405,
#Partially deleted in new
chr13	36949848	36952869	chr13:36949848-36952869	0	-	36949848	36949848	8553170	2	209,356,	0,2665,
#Partially deleted in new
chr13	36949993	36968056	chr13:36949993-36968056	0	-	36949993	36949993	8553170	4	64,86,152,385,	0,2520,15581,17678,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	36985648	37000261	chr13:36985648-37000261	0	-	36985648	36985648	8553170	5	92,93,69,172,330,	0,3835,7955,9776,14283,
#Partially deleted in new
chr13	36998815	37006153	chr13:36998815-37006153	0	+	36998815	36998815	8553170	7	379,37,64,74,46,106,39,	0,3457,3672,4118,5700,7104,7299,
#Partially deleted in new
chr13	37000540	37009401	chr13:37000540-37009401	3	+	37000805	37009299	0	11	282,37,64,74,46,106,46,97,121,107,218,	0,1732,1947,2393,3975,5379,5574,6434,7516,8188,8643,
#Partially deleted in new
chr13	37000782	37008833	chr13:37000782-37008833	0	+	37000805	37002966	789624	9	40,64,74,46,106,46,97,116,105,	0,1705,2151,3733,5137,5332,6192,7279,7946,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr13	37000785	37008785	chr13:37000785-37008785	0	+	37000785	37000785	8553170	11	37,53,37,64,74,46,106,46,97,121,57,	0,963,1487,1702,2148,3730,5134,5329,6189,7271,7943,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr13	37000786	37009401	chr13:37000786-37009401	0	+	37000786	37000786	8553170	10	36,37,64,1628,69,46,97,121,107,218,	0,1486,1701,2147,5170,5328,6188,7270,7942,8397,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	37001473	37003001	chr13:37001473-37003001	0	+	37001473	37001473	8553170	4	328,37,64,68,	0,799,1014,1460,
#Partially deleted in new
chr13	37002267	37008138	chr13:37002267-37008138	0	+	37002267	37002267	8553170	9	42,64,74,23,85,106,46,97,77,	0,220,666,1227,2209,3652,3847,4707,5794,
#Partially deleted in new
chr13	37002267	37008177	chr13:37002267-37008177	0	+	37002267	37002267	8553170	8	42,64,74,85,106,46,97,116,	0,220,666,2209,3652,3847,4707,5794,
#Partially deleted in new
chr13	37002272	37004525	chr13:37002272-37004525	0	+	37002272	37002272	8553170	5	37,64,74,23,10,	0,215,661,1222,2243,
#Partially deleted in new
chr13	37004217	37008832	chr13:37004217-37008832	0	+	37004217	37004217	8553170	6	344,106,46,97,121,104,	0,1702,1897,2757,3839,4511,
#Partially deleted in new
chr13	37006977	37009613	chr13:37006977-37009613	0	+	37006977	37009299	789624	2	94,430,	0,2206,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr13	37009311	37024947	chr13:37009311-37024947	0	-	37009311	37009311	8553170	9	498,104,106,120,56,155,70,159,608,	0,1240,2880,7933,10030,12136,12699,14723,15028,
#Partially deleted in new
chr13	37009311	37059451	chr13:37009311-37059451	0	-	37023030	37051490	789624	25	498,104,106,120,56,155,1034,159,103,118,33,27,158,72,57,157,140,54,117,104,127,67,59,96,90,	0,1240,2880,7933,10030,12136,12699,14723,15028,16008,16892,17478,18836,20453,22255,22427,24137,31093,31264,34766,35935,38223,38566,42176,50050,
#Partially deleted in new
chr13	37009315	37059713	chr13:37009315-37059713	3	-	37009708	37051490	789624	25	494,106,120,56,155,70,159,103,118,33,27,158,72,57,157,140,54,117,104,130,67,59,36,96,155,	0,2876,7929,10026,12132,12695,14719,15024,16004,16888,17474,18832,20449,22251,22423,24133,31089,31260,34762,35931,38219,38562,39248,42172,50243,
#Partially deleted in new
chr13	37009315	37059686	chr13:37009315-37059686	0	-	37023030	37051490	789624	23	494,106,120,56,155,1034,159,103,118,33,27,158,57,157,140,54,117,104,127,67,59,96,128,	0,2876,7929,10026,12132,12695,14719,15024,16004,16888,17474,18832,22251,22423,24133,31089,31260,34762,35931,38219,38562,42172,50243,
#Partially deleted in new
chr13	37009492	37059649	chr13:37009492-37059649	1	-	37009708	37051490	789624	25	317,106,120,56,155,307,159,103,118,33,27,158,72,57,157,140,54,117,104,127,67,59,36,96,91,	0,2699,7752,9849,11955,12518,14542,14847,15827,16711,17297,18655,20272,22074,22246,23956,30912,31083,34585,35754,38042,38385,39071,41995,50066,
#Partially deleted in new
chr13	37009493	37059686	chr13:37009493-37059686	1	-	37009671	37051490	789624	26	316,104,106,120,56,155,70,159,103,118,33,27,158,72,57,157,140,54,117,104,127,67,59,36,96,128,	0,1058,2698,7751,9848,11954,12517,14541,14846,15826,16710,17296,18654,20271,22073,22245,23955,30911,31082,34584,35753,38041,38384,39070,41994,50065,
#Partially deleted in new
chr13	37009493	37059650	chr13:37009493-37059650	1	-	37009708	37051490	789624	25	316,106,120,56,155,70,159,103,118,33,27,158,72,57,157,140,54,117,104,130,67,59,36,96,171,	0,2698,7751,9848,11954,12517,14541,14846,15826,16710,17296,18654,20271,22073,22245,23955,30911,31082,34584,35753,38041,38384,39070,41994,49986,
#Partially deleted in new
chr13	37009493	37026798	chr13:37009493-37026798	0	-	37009671	37026798	789624	12	316,104,106,84,56,155,70,159,103,118,33,9,	0,1058,2698,7751,9848,11954,12517,14541,14846,15826,16710,17296,
#Deleted in new
chr13	37009493	37010852	chr13:37009493-37010852	0	-	37009493	37009493	8553170	2	316,301,	0,1058,
#Deleted in new
chr13	37009496	37013906	chr13:37009496-37013906	0	-	37009496	37009496	8553170	2	313,1715,	0,2695,
#Partially deleted in new
chr13	37009499	37051646	chr13:37009499-37051646	1	-	37009610	37051490	789624	25	134,90,106,120,56,155,70,159,103,118,33,27,158,72,57,157,140,54,117,104,127,67,59,36,159,	0,220,2692,7745,9842,11948,12511,14535,14840,15820,16704,17290,18648,20265,22067,22239,23949,30905,31076,34578,35747,38035,38378,39064,41988,
#Partially deleted in new
chr13	37009616	37059432	chr13:37009616-37059432	1	-	37009708	37051490	789624	25	193,106,120,56,155,70,159,103,118,33,27,158,72,57,157,140,54,117,104,130,67,59,36,96,238,	0,2575,7628,9725,11831,12394,14418,14723,15703,16587,17173,18531,20148,21950,22122,23832,30788,30959,34461,35630,37918,38261,38947,41871,49578,
#Partially deleted in new
chr13	37022222	37028231	chr13:37022222-37028231	0	-	37022222	37022222	8553170	7	95,159,103,118,33,27,84,	0,1812,2117,3097,3981,4567,5925,
#Partially deleted in new
chr13	37023548	37051559	chr13:37023548-37051559	0	-	37023548	37023548	8553170	18	645,103,118,33,27,158,72,57,157,140,54,117,104,130,67,59,36,72,	0,791,1771,2655,3241,4599,6216,8018,8190,9900,16856,17027,20529,21698,23986,24329,25015,27939,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	37024133	37028308	chr13:37024133-37028308	0	-	37024133	37024133	8553170	5	60,247,33,27,161,	0,1057,2070,2656,4014,
#Partially deleted in new
chr13	37024150	37033479	chr13:37024150-37033479	0	-	37024150	37024150	8553170	8	43,103,33,27,158,57,157,31,	0,189,2053,2639,3997,7416,7588,9298,
#Deleted in new
chr13	37025829	37028304	chr13:37025829-37028304	0	-	37025829	37025829	8553170	3	407,27,157,	0,960,2318,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	37038034	37059639	chr13:37038034-37059639	0	-	37038034	37038034	8553170	7	2424,117,104,67,59,96,81,	0,2541,6043,9500,9843,13453,21524,
#Partially deleted in new
chr13	37040403	37059639	chr13:37040403-37059639	0	-	37040403	37040403	8553170	9	55,117,104,127,63,67,59,96,81,	0,172,3674,4843,6942,7131,7474,11084,19155,
#Partially deleted in new
chr13	37040403	37048600	chr13:37040403-37048600	0	-	37040403	37040403	8553170	6	55,117,104,67,59,37,	0,172,3674,7131,7474,8160,
#Partially deleted in new
chr13	37040404	37059629	chr13:37040404-37059629	0	-	37040404	37051490	789624	9	54,117,104,130,67,59,36,96,71,	0,171,3673,4842,7130,7473,8159,11083,19154,
#Partially deleted in new
chr13	37040416	37059639	chr13:37040416-37059639	0	-	37040416	37040416	8553170	10	42,117,104,127,63,67,59,36,96,81,	0,159,3661,4830,6929,7118,7461,8147,11071,19142,
#Deleted in new
chr13	37046863	37047937	chr13:37046863-37047937	0	-	37046863	37046863	8553170	2	738,60,	0,1014,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	37051541	37059468	chr13:37051541-37059468	0	-	37051541	37051541	8553170	3	42,256,274,	0,5336,7653,
#Deleted in new
chr13	37103258	37105664	chr13:37103258-37105664	3	-	37104242	37105256	789624	1	2406,	0,
#Deleted in new
chr13	37139175	37139585	chr13:37139175-37139585	7	-	37139175	37139175	16724991	1	410,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	37142966	37146718	chr13:37142966-37146718	3	-	37142966	37142966	8553170	1	3752,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	37166351	37166658	chr13:37166351-37166658	3	-	37166351	37166351	8553170	1	307,	0,
#Deleted in new
chr13	37220859	37221246	chr13:37220859-37221246	7	-	37220859	37220859	16724991	1	387,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	37481466	37484769	chr13:37481466-37484769	3	-	37481466	37481466	789624	4	261,109,76,65,	0,2818,3003,3238,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	37534939	37551536	chr13:37534939-37551536	3	+	37534939	37534939	789624	5	25,37,71,145,3036,	0,875,12894,13156,13561,
#Partially deleted in new
chr13	37562582	37598844	chr13:37562582-37598844	1	-	37563332	37598726	0	21	788,42,78,90,90,46,68,103,131,131,137,149,135,213,142,147,165,158,65,99,237,	0,1936,7161,7997,8786,15170,16261,16436,16646,17278,17978,19783,21386,22133,23556,24199,25239,27789,29517,34601,36025,
#Partially deleted in new
chr13	37562584	37598761	chr13:37562584-37598761	1	-	37563332	37598726	789624	22	786,42,78,90,90,81,46,68,103,131,131,137,149,135,213,142,147,165,158,65,99,154,	0,1934,7159,7995,8784,11987,15168,16259,16434,16644,17276,17976,19781,21384,22131,23554,24197,25237,27787,29515,34599,36023,
#Partially deleted in new
chr13	37562587	37598844	chr13:37562587-37598844	1	-	37563332	37598726	0	20	783,42,84,78,46,68,103,131,131,137,149,135,213,142,147,165,158,65,99,237,	0,1931,6712,7156,15165,16256,16431,16641,17273,17973,19778,21381,22128,23551,24194,25234,27784,29512,34596,36020,
#Partially deleted in new
chr13	37562588	37598844	chr13:37562588-37598844	3	-	37563332	37598726	0	23	782,42,84,78,90,90,81,46,68,103,131,131,137,149,135,213,142,147,165,158,65,99,237,	0,1930,6711,7155,7991,8780,11983,15164,16255,16430,16640,17272,17972,19777,21380,22127,23550,24193,25233,27783,29511,34595,36019,
#Partially deleted in new
chr13	37562590	37598750	chr13:37562590-37598750	1	-	37563332	37598726	0	22	780,42,84,78,90,90,46,68,103,131,131,137,149,135,213,142,147,165,158,65,99,143,	0,1928,6709,7153,7989,8778,15162,16253,16428,16638,17270,17970,19775,21378,22125,23548,24191,25231,27781,29509,34593,36017,
#Partially deleted in new
chr13	37562633	37598758	chr13:37562633-37598758	1	-	37563332	37598726	0	21	737,42,84,78,90,46,68,103,131,131,137,149,135,213,142,147,165,158,65,99,151,	0,1885,6666,7110,7946,15119,16210,16385,16595,17227,17927,19732,21335,22082,23505,24148,25188,27738,29466,34550,35974,
#Deleted in new
chr13	37562696	37565003	chr13:37562696-37565003	0	-	37562696	37562696	8553170	2	674,485,	0,1822,
#Partially deleted in new
chr13	37563220	37570811	chr13:37563220-37570811	0	-	37563220	37563220	8553170	4	150,42,78,232,	0,1298,6523,7359,
#Partially deleted in new
chr13	37565247	37569790	chr13:37565247-37569790	0	-	37565247	37565247	8553170	3	249,84,47,	0,4052,4496,
#Partially deleted in new
chr13	37568682	37571535	chr13:37568682-37571535	0	-	37568682	37568682	8553170	3	701,78,956,	0,1061,1897,
#Partially deleted in new
chr13	37636635	37870425	chr13:37636635-37870425	3	-	37636902	37783333	789624	11	990,90,42,195,196,314,140,337,519,405,831,	0,2404,2622,14629,18452,26780,37592,55363,109301,146320,232959,
#Partially deleted in new
chr13	37636640	37869802	chr13:37636640-37869802	1	-	37636902	37783333	789624	10	985,90,42,195,196,314,140,337,405,208,	0,2399,2617,14624,18447,26775,37587,55358,146315,232954,
#Partially deleted in new
chr13	37636842	37783333	chr13:37636842-37783333	1	-	37636902	37783333	789624	9	783,90,42,195,196,314,140,337,378,	0,2197,2415,14422,18245,26573,37385,55156,146113,
#Partially deleted in new
chr13	37636842	37869723	chr13:37636842-37869723	1	-	37655274	37783333	789624	10	386,142,260,195,196,140,337,519,405,129,	0,641,2197,14422,18245,37385,55156,109094,146113,232752,
#Partially deleted in new
chr13	37636842	37783333	chr13:37636842-37783333	0	-	37674292	37783333	789624	9	783,90,42,195,196,314,140,519,378,	0,2197,2415,14422,18245,26573,37385,109094,146113,
#Partially deleted in new
chr13	37636842	37783333	chr13:37636842-37783333	1	-	37636902	37783333	789624	10	783,90,42,210,196,314,140,337,519,378,	0,2197,2415,14407,18245,26573,37385,55156,109094,146113,
#Partially deleted in new
chr13	37636864	37869802	chr13:37636864-37869802	1	-	37636902	37783333	789624	11	361,67,42,195,196,314,140,337,519,405,208,	0,2198,2393,14400,18223,26551,37363,55134,109072,146091,232730,
#Partially deleted in new
chr13	37636864	37869802	chr13:37636864-37869802	1	-	37636902	37783333	789624	12	367,142,90,42,195,196,314,140,337,519,405,208,	0,619,2175,2393,14400,18223,26551,37363,55134,109072,146091,232730,
#Partially deleted in new
chr13	37636864	37869802	chr13:37636864-37869802	1	-	37636902	37783333	789624	11	367,142,90,42,196,314,140,337,519,405,208,	0,619,2175,2393,18223,26551,37363,55134,109072,146091,232730,
#Partially deleted in new
chr13	37663427	37674370	chr13:37663427-37674370	0	-	37663427	37663427	8553170	2	297,143,	0,10800,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	37934564	38048169	chr13:37934564-38048169	3	+	37934564	37934564	8553170	5	473,126,98,43,4219,	0,63247,78839,95084,109386,
#Deleted in new
chr13	37993084	37994720	chr13:37993084-37994720	7	-	37993084	37993084	16724991	1	1636,	0,
#Partially deleted in new
chr13	38053697	38061448	chr13:38053697-38061448	1	-	38053697	38053697	8553170	2	472,53,	0,7698,
#Partially deleted in new
chr13	38053919	38061453	chr13:38053919-38061453	0	-	38053919	38053919	8553170	3	250,190,58,	0,5599,7476,
#Partially deleted in new
chr13	38349848	38354885	chr13:38349848-38354885	0	+	38349848	38349848	8553170	3	73,57,647,	0,150,4390,
#Partially deleted in new
chr13	38349850	38361125	chr13:38349850-38361125	1	+	38350114	38360778	0	6	71,229,58,40,33,415,	0,148,4388,8242,9450,10860,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	38349880	38363619	chr13:38349880-38363619	3	+	38349919	38360778	0	6	41,57,58,40,33,2909,	0,118,4358,8212,9420,10830,
#Partially deleted in new
chr13	38349885	38354558	chr13:38349885-38354558	0	+	38349885	38349885	8553170	3	36,229,320,	0,113,4353,
#Partially deleted in new
chr13	38349995	38359781	chr13:38349995-38359781	0	+	38349995	38359386	789624	4	60,58,40,481,	0,4243,8097,9305,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	38372855	38373935	chr13:38372855-38373935	3	+	38372855	38372855	8553170	1	1080,	0,
#Partially deleted in new
chr13	38533342	38545299	chr13:38533342-38545299	3	-	38533342	38533342	8553170	2	678,113,	0,11844,
#Duplicated in new
chr13	38576639	38578994	chr13:38576639-38578994	3	+	38576639	38576639	8553170	3	63,106,266,	0,965,2089,
#Deleted in new
chr13	38617418	38617940	chr13:38617418-38617940	7	-	38617418	38617418	16724991	1	522,	0,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr13	38687128	38887131	chr13:38687128-38887131	3	+	38687344	38880787	789624	24	5389,90,147,231,126,252,150,210,198,165,183,131,159,304,132,332,193,105,128,135,127,188,147,6848,	0,10569,77175,82449,95941,97428,159444,161332,162909,163815,164557,168997,170746,172158,174302,177146,185613,187353,188893,189119,189988,191005,191702,193155,
#Deleted in new
chr13	38779423	38779516	chr13:38779423-38779516	3	+	38779423	38779423	8553170	1	93,	0,
#Partially deleted in new
chr13	38821695	38850235	chr13:38821695-38850235	0	+	38821695	38821695	8553170	4	153,150,210,198,	0,24877,26765,28342,
#Partially deleted in new
chr13	38821797	38827570	chr13:38821797-38827570	3	-	38821797	38821797	8553170	2	305,160,	0,5613,
#Deleted in new
chr13	38902386	38902650	chr13:38902386-38902650	7	+	38902386	38902386	16724991	1	264,	0,
#Partially deleted in new
chr13	38922726	38936199	chr13:38922726-38936199	7	-	38922726	38922726	16724991	7	211,229,124,826,128,52,140,	0,786,6303,8880,11535,12961,13333,
#Partially deleted in new
chr13	38965924	38991066	chr13:38965924-38991066	3	-	38966824	38990721	789624	7	1125,135,204,83,73,104,397,	0,2475,4260,6587,10615,10769,24745,
#Partially deleted in new
chr13	38965925	38990859	chr13:38965925-38990859	1	-	38966824	38980076	789624	8	1124,135,204,83,73,104,84,190,	0,2474,4259,6586,10614,10768,14126,24744,
#Partially deleted in new
chr13	39009865	39038076	chr13:39009865-39038076	3	-	39011364	39037242	789624	13	1622,151,1786,45,87,79,84,111,94,95,69,66,879,	0,2217,2825,7634,12460,13186,14607,16411,18361,19415,21697,24265,27332,
#Partially deleted in new
chr13	39009865	39038076	chr13:39009865-39038076	1	-	39011364	39037242	789624	12	1622,151,1786,45,87,79,84,111,94,95,69,879,	0,2217,2825,7634,12460,13186,14607,16411,18361,19415,21697,27332,
#Partially deleted in new
chr13	39010152	39023930	chr13:39010152-39023930	0	-	39010152	39010152	8553170	3	1335,107,708,	0,1930,13070,
#Deleted in new
chr13	39011139	39012778	chr13:39011139-39012778	0	-	39011139	39011139	8553170	3	198,151,88,	0,943,1551,
#Deleted in new
chr13	39011375	39012475	chr13:39011375-39012475	0	-	39011375	39011375	8553170	2	112,393,	0,707,
#Partially deleted in new
chr13	39014369	39022742	chr13:39014369-39022742	0	-	39014369	39014369	8553170	3	107,45,417,	0,3130,7956,
#Deleted in new
chr13	39014402	39017999	chr13:39014402-39017999	0	-	39014402	39014402	8553170	2	74,500,	0,3097,
#Partially deleted in new
chr13	39022353	39026472	chr13:39022353-39026472	0	-	39022353	39022353	8553170	4	59,79,84,196,	0,698,2119,3923,
#Partially deleted in new
chr13	39024502	39031709	chr13:39024502-39031709	0	-	39024502	39024502	8553170	5	54,111,94,95,147,	0,1774,3724,4778,7060,
#Partially deleted in new
chr13	39028226	39037837	chr13:39028226-39037837	0	-	39028226	39037242	789624	4	94,95,69,640,	0,1054,3336,8971,
#Partially deleted in new
chr13	39029031	39037294	chr13:39029031-39037294	0	-	39029031	39029031	8553170	4	344,69,66,97,	0,2531,5099,8166,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	39038305	39041817	chr13:39038305-39041817	0	+	39038305	39038305	8553170	2	983,2254,	0,1258,
#Partially deleted in new
chr13	39038310	39050109	chr13:39038310-39050109	1	+	39044094	39047926	789624	7	155,153,148,201,92,113,2436,	0,825,1253,3794,5779,8729,9363,
#Partially deleted in new
chr13	39038317	39050109	chr13:39038317-39050109	3	+	39038639	39047926	789624	7	406,153,148,201,92,113,2436,	0,818,1246,3787,5772,8722,9356,
#Partially deleted in new
chr13	39038390	39050109	chr13:39038390-39050109	1	+	39038639	39047926	789624	6	333,153,148,92,113,2436,	0,745,1173,5699,8649,9283,
#Partially deleted in new
chr13	39042057	39044464	chr13:39042057-39044464	0	+	39042057	39042057	8553170	2	248,375,	0,2032,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	39053071	39221927	chr13:39053071-39221927	3	+	39053071	39053071	8553170	3	257,100,283,	0,138531,168573,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	39053071	39089112	chr13:39053071-39089112	1	+	39053071	39053071	8553170	3	257,128,331,	0,32055,35710,
#Partially deleted in new
chr13	39169635	39169951	chr13:39169635-39169951	7	-	39169635	39169635	16724991	1	316,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr13	39209115	39603226	chr13:39209115-39603226	0	-	39343935	39601216	789624	14	989,528,171,46,54,84,92,140,22,56,201,99,559,344,	0,6848,10219,10705,10969,18713,47874,95255,97225,100690,134738,169312,391716,393767,
#Partially deleted in new
chr13	39342891	39603171	chr13:39342891-39603171	3	-	39343935	39601216	789624	4	1163,99,559,289,	0,35536,257940,259991,
#Deleted in new
chr13	39601312	39603528	chr13:39601312-39603528	0	-	39601312	39601312	8553170	3	78,151,217,	0,1570,1999,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr13	39655626	39791665	chr13:39655626-39791665	1	+	39655726	39788356	789624	19	253,144,72,59,112,83,71,94,129,92,65,92,118,132,168,108,54,80,3331,	0,3737,5183,9469,21841,23911,24348,26544,31876,32081,34133,39007,43874,63609,64033,67706,68881,71842,132708,
#Partially deleted in new
chr13	39655650	39659503	chr13:39655650-39659503	0	+	39655726	39656149	789624	3	229,159,140,	0,466,3713,
#Partially deleted in new
chr13	39655661	39659467	chr13:39655661-39659467	0	+	39655726	39656149	789624	4	218,159,65,104,	0,455,1164,3702,
#Partially deleted in new
chr13	39655661	39677577	chr13:39655661-39677577	0	+	39655726	39659449	789624	5	218,94,72,59,110,	0,3752,5148,9434,21806,
#Partially deleted in new
chr13	39655676	39752632	chr13:39655676-39752632	3	+	39655726	39751093	789624	19	203,144,72,59,112,83,71,94,129,92,65,92,118,132,168,108,54,80,1687,	0,3687,5133,9419,21791,23861,24298,26494,31826,32031,34083,38957,43824,63559,63983,67656,68831,71792,95269,
#Partially deleted in new
chr13	39655723	39752500	chr13:39655723-39752500	0	+	39655726	39659373	789624	20	156,65,144,72,59,112,83,71,94,129,92,65,92,118,132,168,108,54,80,1555,	0,1102,3640,5086,9372,21744,23814,24251,26447,31779,31984,34036,38910,43777,63512,63936,67609,68784,71745,95222,
#Deleted in new
chr13	39655726	39656149	chr13:39655726-39656149	1	+	39655726	39656149	789624	2	153,33,	0,390,
#Partially deleted in new
chr13	39659395	39687546	chr13:39659395-39687546	0	+	39659395	39680022	789624	7	112,72,59,112,71,94,44,	0,1414,5700,18072,20579,22775,28107,
#Partially deleted in new
chr13	39664033	39664135	chr13:39664033-39664135	3	-	39664033	39664033	5263520	1	102,	0,
#Partially deleted in new
chr13	39679346	39687593	chr13:39679346-39687593	0	+	39679346	39679346	8553170	4	274,71,94,91,	0,628,2824,8156,
#Partially deleted in new
chr13	39679595	39682473	chr13:39679595-39682473	0	+	39679595	39679595	8553170	2	450,303,	0,2575,
#Partially deleted in new
chr13	39687542	39689820	chr13:39687542-39689820	0	+	39687542	39687542	8553170	2	257,61,	0,2217,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	39785414	39785510	chr13:39785414-39785510	3	-	39785414	39785414	8553170	1	96,	0,
#Deleted in new
chr13	39817740	39818049	chr13:39817740-39818049	7	-	39817740	39817740	16724991	1	309,	0,
#Deleted in new
chr13	39856709	39857094	chr13:39856709-39857094	7	-	39856709	39856709	16724991	1	385,	0,
#Deleted in new
chr13	39857134	39857227	chr13:39857134-39857227	3	-	39857134	39857134	8553170	1	93,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	40079105	40273509	chr13:40079105-40273509	3	-	40079105	40079105	8553170	4	3211,111,173,46,	0,18751,138472,194358,
#Partially deleted in new
chr13	40081823	40186842	chr13:40081823-40186842	1	-	40081823	40081823	8553170	8	493,97,99,111,106,63,116,63,	0,12712,13595,16033,35211,37639,79758,104956,
#Partially deleted in new
chr13	40181808	40189028	chr13:40181808-40189028	3	+	40181808	40181808	789624	4	54,108,102,570,	0,4337,6112,6650,
#Partially deleted in new
chr13	40194508	40220502	chr13:40194508-40220502	1	-	40194508	40194508	789624	6	1883,144,113,191,154,66,	0,2759,3256,9819,12390,25928,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	40198073	40377261	chr13:40198073-40377261	1	-	40198073	40198073	8553170	6	1136,69,191,173,194,211,	0,2749,6254,19504,152035,178977,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	40203616	40350313	chr13:40203616-40350313	1	-	40203616	40203616	8553170	4	902,154,195,205,	0,3282,102948,146492,
#Deleted in new
chr13	40224624	40224862	chr13:40224624-40224862	7	-	40224624	40224624	16724991	1	238,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	40226826	40226932	chr13:40226826-40226932	3	+	40226826	40226826	8553170	1	106,	0,
#Partially deleted in new
chr13	40284776	40403766	chr13:40284776-40403766	0	-	40284776	40284776	8553170	4	890,249,194,168,	0,59180,65332,118822,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr13	40296111	40481028	chr13:40296111-40481028	1	-	40296111	40296111	8553170	11	303,149,212,249,194,178,140,125,171,102,120,	0,989,29507,47845,53997,80939,154952,164170,170395,177882,184797,
#Partially deleted in new
chr13	40314794	40439787	chr13:40314794-40439787	0	-	40314794	40314794	8553170	4	738,249,194,116,	0,29162,35314,124877,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	40347131	40460351	chr13:40347131-40460351	1	-	40347131	40347131	8553170	2	3171,70,	0,113150,
#Deleted in new
chr13	40407121	40407440	chr13:40407121-40407440	3	-	40407121	40407121	8553170	1	319,	0,
#Partially deleted in new
chr13	40450935	40470249	chr13:40450935-40470249	0	-	40450935	40450935	8553170	5	268,1155,125,171,254,	0,6578,9346,15571,19060,
#Partially deleted in new
chr13	40452656	40460409	chr13:40452656-40460409	0	-	40452656	40452656	8553170	2	55,128,	0,7625,
#Deleted in new
chr13	40478765	40481072	chr13:40478765-40481072	1	-	40478765	40478765	8553170	4	463,136,142,164,	0,1173,1470,2143,
#Partially deleted in new
chr13	40555666	40666597	chr13:40555666-40666597	3	-	40559522	40666212	0	3	3368,1352,1015,	0,3842,109916,
#Partially deleted in new
chr13	40560758	40562764	chr13:40560758-40562764	0	-	40560758	40560758	8553170	2	102,76,	0,1930,
#Partially deleted in new
chr13	40618737	40621348	chr13:40618737-40621348	7	+	40618737	40618737	16724991	3	261,1179,240,	0,586,2371,
#Deleted in new
chr13	40727827	40727875	chr13:40727827-40727875	3	-	40727827	40727827	5263520	1	48,	0,
#Partially deleted in new
chr13	40729134	40771173	chr13:40729134-40771173	3	-	40729371	40771136	0	7	467,144,74,141,159,288,189,	0,20003,24884,27738,29813,37611,41850,
#Partially deleted in new
chr13	40729295	40749613	chr13:40729295-40749613	0	-	40729295	40729295	8553170	2	306,476,	0,19842,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	40729373	40752407	chr13:40729373-40752407	0	-	40729373	40729373	8553170	3	228,144,135,	0,19764,22899,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	40730980	40731253	chr13:40730980-40731253	3	+	40730980	40730980	8553170	1	273,	0,
#Partially deleted in new
chr13	40759001	40770943	chr13:40759001-40770943	0	-	40759001	40759001	8553170	3	105,288,195,	0,7744,11747,
#Partially deleted in new
chr13	40789411	40808470	chr13:40789411-40808470	0	+	40789411	40789411	8553170	7	252,124,259,166,138,170,33,	0,3746,9645,12723,15706,17882,19026,
#Partially deleted in new
chr13	40789496	40810111	chr13:40789496-40810111	3	+	40793226	40809667	789624	7	167,124,259,138,170,159,569,	0,3661,9560,15621,17797,18941,20046,
#Partially deleted in new
chr13	40793157	40807378	chr13:40793157-40807378	0	+	40793226	40807378	789624	3	124,259,85,	0,5899,14136,
#Partially deleted in new
chr13	40793157	40807426	chr13:40793157-40807426	0	+	40793226	40805120	789624	4	124,116,138,133,	0,5899,11960,14136,
#Partially deleted in new
chr13	40810765	40810861	chr13:40810765-40810861	3	+	40810765	40810765	5263520	1	96,	0,
#Partially deleted in new
chr13	40822295	40864352	chr13:40822295-40864352	5	-	40822295	40822295	16724991	8	80,62,73,119,94,78,61,161,	0,2431,4210,14262,32365,32561,33459,41896,
#Partially deleted in new
chr13	40826348	40854991	chr13:40826348-40854991	4	-	40826348	40826348	16724991	4	246,92,77,331,	0,10248,10460,28312,
#Partially deleted in new
chr13	40826505	40921749	chr13:40826505-40921749	7	-	40826505	40826505	16724991	5	89,92,77,61,131,	0,10091,10303,29249,95113,
#Partially deleted in new
chr13	40855175	40921715	chr13:40855175-40921715	4	-	40855175	40855175	16724991	3	640,54,97,	0,52983,66443,
#Deleted in new
chr13	40863598	40863902	chr13:40863598-40863902	7	-	40863598	40863598	16724991	1	304,	0,
#Partially deleted in new
chr13	40882576	40921740	chr13:40882576-40921740	7	-	40882576	40882576	16724991	3	396,54,122,	0,25582,39042,
#Partially deleted in new
chr13	40882668	40921721	chr13:40882668-40921721	4	-	40882668	40882668	16724991	4	304,54,58,103,	0,25490,38805,38950,
#Partially deleted in new
chr13	40908158	40921656	chr13:40908158-40921656	5	-	40908158	40908158	16724991	6	54,72,70,91,58,38,	0,3575,4355,5856,13315,13460,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	40911886	40921774	chr13:40911886-40921774	5	-	40911886	40911886	16724991	3	837,58,156,	0,9587,9732,
#Partially deleted in new
chr13	40913915	40921661	chr13:40913915-40921661	4	-	40913915	40913915	16724991	3	190,58,43,	0,7558,7703,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr13	40932027	40982242	chr13:40932027-40982242	0	-	40951432	40982054	789624	9	2001,450,193,84,168,108,118,181,260,	0,8893,10924,11814,17778,19301,19556,26808,49955,
#Partially deleted in new
chr13	40932033	41019314	chr13:40932033-41019314	3	-	40933424	40982054	789624	9	1995,450,193,84,168,108,181,300,87,	0,8887,10918,11808,17772,19295,26802,49949,87194,
#Partially deleted in new
chr13	40933351	40982225	chr13:40933351-40982225	1	-	40933424	40982054	789624	8	677,450,193,84,96,108,181,243,	0,7569,9600,10490,16454,17977,25484,48631,
#Partially deleted in new
chr13	40933438	40982899	chr13:40933438-40982899	0	-	40933438	40982054	789624	9	590,450,193,84,168,108,181,300,42,	0,7482,9513,10403,16367,17890,25397,48544,49419,
#Partially deleted in new
chr13	40981982	41061440	chr13:40981982-41061440	0	-	40981982	40982054	789624	2	300,603,	0,78855,
#Deleted in new
chr13	40992778	40993331	chr13:40992778-40993331	7	-	40992778	40992778	16724991	1	553,	0,
#Partially deleted in new
chr13	41061273	41084006	chr13:41061273-41084006	3	+	41061673	41082914	0	10	402,73,63,124,177,47,76,194,164,1303,	0,1370,3742,3890,7287,10253,11508,14770,19372,21430,
#Deleted in new
chr13	41101018	41101100	chr13:41101018-41101100	3	-	41101018	41101018	5263520	1	82,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	41121875	41122171	chr13:41121875-41122171	3	+	41121875	41121875	8553170	1	296,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	41127568	41132746	chr13:41127568-41132746	3	-	41130486	41132511	0	1	5178,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	41132938	41236686	chr13:41132938-41236686	1	+	41132938	41132938	789624	4	117,81,141,1571,	0,13488,29324,102177,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	41132958	41192835	chr13:41132958-41192835	0	+	41132958	41132958	8553170	4	97,81,141,196,	0,13468,29304,59681,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	41133010	41187568	chr13:41133010-41187568	0	+	41133010	41133010	8553170	4	45,81,141,338,	0,13416,29252,54220,
#Deleted in new
chr13	41170699	41171148	chr13:41170699-41171148	7	-	41170699	41170699	16724991	1	449,	0,
#Deleted in new
chr13	41189832	41194566	chr13:41189832-41194566	3	-	41192202	41194257	789624	1	4734,	0,
#Partially deleted in new
chr13	41199831	41200807	chr13:41199831-41200807	7	-	41199831	41199831	16724991	1	976,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr13	41216368	41263577	chr13:41216368-41263577	3	-	41217114	41260907	789624	10	860,99,137,118,173,108,82,92,423,93,	0,6887,10063,17521,23892,36276,36580,38160,44124,47116,
#Partially deleted in new
chr13	41216974	41226569	chr13:41216974-41226569	0	-	41216974	41216974	8553170	4	254,107,99,138,	0,3562,6281,9457,
#Deleted in new
chr13	41229179	41229676	chr13:41229179-41229676	3	-	41229179	41229179	8553170	1	497,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	41252281	41263569	chr13:41252281-41263569	0	-	41257755	41260907	789624	7	471,82,92,124,423,284,85,	0,667,2247,5391,8211,9766,11203,
#Partially deleted in new
chr13	41252283	41260586	chr13:41252283-41260586	0	-	41252606	41260586	789624	4	469,82,92,94,	0,665,2245,8209,
#Partially deleted in new
chr13	41252663	41263547	chr13:41252663-41263547	0	-	41252663	41260907	789624	6	89,82,92,423,71,63,	0,285,1865,7829,9747,10821,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	41252704	41263577	chr13:41252704-41263577	0	-	41257750	41260907	789624	6	48,82,92,125,423,93,	0,244,1824,4968,7788,10780,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	41261332	41263538	chr13:41261332-41263538	0	-	41261332	41261332	8553170	3	493,71,54,	0,1078,2152,
#Deleted in new
chr13	41287740	41288320	chr13:41287740-41288320	7	-	41287740	41287740	16724991	1	580,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr13	41311204	41377030	chr13:41311204-41377030	3	+	41311528	41375602	789624	20	378,85,105,158,135,154,120,96,107,73,170,153,129,214,194,109,99,144,98,1626,	0,5641,7601,9462,11851,14493,17519,20069,25445,43939,47099,47605,50826,56234,57885,60998,61527,62432,63537,64200,
#Partially deleted in new
chr13	41311279	41358718	chr13:41311279-41358718	1	+	41311528	41358506	789624	11	303,85,105,158,135,154,120,96,107,73,415,	0,5566,7526,9387,11776,14418,17444,19994,25370,43864,47024,
#Partially deleted in new
chr13	41311281	41358718	chr13:41311281-41358718	0	+	41311281	41311281	8553170	10	301,85,105,158,135,154,120,96,73,415,	0,5564,7524,9385,11774,14416,17442,19992,43862,47022,
#Partially deleted in new
chr13	41311294	41369204	chr13:41311294-41369204	0	+	41311528	41362171	789624	15	288,85,105,158,135,154,120,96,107,73,170,153,843,214,115,	0,5551,7511,9372,11761,14403,17429,19979,25355,43849,47009,47515,50736,56144,57795,
#Partially deleted in new
chr13	41327856	41336687	chr13:41327856-41336687	0	+	41327856	41327856	8553170	4	194,120,96,38,	0,867,3417,8793,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	41354556	41354659	chr13:41354556-41354659	3	-	41354556	41354556	8553170	1	103,	0,
#Partially deleted in new
chr13	41358306	41369204	chr13:41358306-41369204	0	+	41358306	41358306	8553170	5	167,153,129,214,115,	0,503,3724,9132,10783,
#Partially deleted in new
chr13	41362125	41373680	chr13:41362125-41373680	0	+	41362125	41362125	8553170	7	34,143,214,194,109,99,44,	0,605,5313,6964,10077,10606,11511,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	41362454	41377030	chr13:41362454-41377030	0	+	41362454	41362454	8553170	8	419,214,194,109,99,144,98,1626,	0,4984,6635,9748,10277,11182,12287,12950,
#Partially deleted in new
chr13	41369238	41373781	chr13:41369238-41373781	0	+	41369238	41369238	8553170	4	45,109,99,121,	0,2964,3493,4422,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	41372814	41376182	chr13:41372814-41376182	0	+	41372814	41372814	8553170	4	16,113,98,778,	0,953,1927,2590,
#Deleted in new
chr13	41374474	41375812	chr13:41374474-41375812	0	+	41374474	41374474	8553170	2	365,408,	0,930,
#Deleted in new
chr13	41384772	41385183	chr13:41384772-41385183	7	-	41384772	41384772	16724991	1	411,	0,
#Deleted in new
chr13	41431247	41432201	chr13:41431247-41432201	7	-	41431247	41431247	16724991	1	954,	0,
#Deleted in new
chr13	41439833	41440847	chr13:41439833-41440847	7	-	41439833	41439833	16724991	1	1014,	0,
#Deleted in new
chr13	41442769	41443666	chr13:41442769-41443666	7	+	41442769	41442769	16724991	1	897,	0,
#Partially deleted in new
chr13	41457558	41470882	chr13:41457558-41470882	3	+	41457707	41470485	789624	5	198,186,108,63,405,	0,726,9264,11217,12919,
#Partially deleted in new
chr13	41464114	41468844	chr13:41464114-41468844	0	+	41464114	41464114	8553170	3	66,108,69,	0,2708,4661,
#Partially deleted in new
chr13	41566836	41961084	chr13:41566836-41961084	1	-	41568196	41961015	789624	45	1469,239,99,159,126,109,157,109,202,82,196,155,110,126,65,111,200,139,109,152,206,120,136,76,77,72,107,107,116,78,169,114,161,78,135,132,105,109,50,165,168,111,131,78,232,	0,3631,8903,20675,23803,38331,44739,48139,104109,108378,118210,122517,123329,124483,125037,126025,132234,134555,136466,152754,154533,160357,162705,165243,194291,211148,216958,220600,244388,249861,252381,263692,266534,298899,299065,301509,316550,319083,319944,320360,324583,340749,345201,383099,394016,
#Deleted in new
chr13	41568285	41568395	chr13:41568285-41568395	3	-	41568285	41568285	5263520	1	110,	0,
#Deleted in new
chr13	41689432	41696119	chr13:41689432-41696119	0	-	41689432	41689432	8553170	6	76,110,126,65,111,51,	0,733,1887,2441,3429,6636,
#Partially deleted in new
chr13	41719336	41961120	chr13:41719336-41961120	3	-	41719586	41961015	789624	26	406,206,120,136,76,77,72,107,107,116,78,169,114,161,78,135,132,105,109,50,165,168,111,131,78,268,	0,2033,7857,10205,12743,41791,58648,64458,68100,91888,97361,99881,111192,114034,146399,146565,149009,164050,166583,167444,167860,172083,188249,192701,230599,241516,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	41807676	41807973	chr13:41807676-41807973	3	+	41807676	41807676	8553170	1	297,	0,
#Partially deleted in new
chr13	41865590	41868403	chr13:41865590-41868403	0	-	41865590	41865590	8553170	3	223,135,58,	0,311,2755,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	41905117	41905224	chr13:41905117-41905224	3	+	41905117	41905117	8553170	1	107,	0,
#Partially deleted in new
chr13	41925597	41927349	chr13:41925597-41927349	7	+	41925597	41925597	16724991	1	1752,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	41955807	41980977	chr13:41955807-41980977	0	+	41955807	41955807	8553170	4	71,72,146,185,	0,12593,20663,24985,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	41961168	41981565	chr13:41961168-41981565	3	+	41961168	41961168	789624	4	1066,72,168,773,	0,7232,15280,19624,
#Partially deleted in new
chr13	42003429	42003637	chr13:42003429-42003637	7	+	42003429	42003429	16724991	1	208,	0,
#Partially deleted in new
chr13	42040035	42229755	chr13:42040035-42229755	1	+	42048773	42229151	789624	30	91,204,111,81,105,133,107,126,103,160,109,140,85,86,100,274,123,132,118,111,97,108,114,135,164,106,93,120,109,657,	0,8726,87427,89516,115255,115631,119230,119975,125295,126479,128404,128643,134024,138099,147013,149000,150367,154849,158442,159530,159777,166003,168923,169295,170566,174471,175539,179194,179650,189063,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	42043726	42044247	chr13:42043726-42044247	3	-	42043726	42043726	8553170	2	222,141,	0,380,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr13	42048752	42242896	chr13:42048752-42242896	1	+	42048773	42229151	789624	29	213,111,81,105,133,107,126,103,160,109,140,85,86,100,274,123,132,118,111,97,108,114,135,164,106,93,120,109,13798,	0,78710,80799,106538,106914,110513,111258,116578,117762,119687,119926,125307,129382,138296,140283,141650,146132,149725,150813,151060,157286,160206,160578,161849,165754,166822,170477,170933,180346,
#Partially deleted in new
chr13	42048752	42229750	chr13:42048752-42229750	3	+	42048773	42229188	789624	30	213,111,81,105,133,107,126,103,160,109,140,85,86,100,274,123,132,118,111,97,108,114,135,164,106,93,120,109,131,652,	0,78710,80799,106538,106914,110513,111258,116578,117762,119687,119926,125307,129382,138296,140283,141650,146132,149725,150813,151060,157286,160206,160578,161849,165754,166822,170477,170933,172511,180346,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	42048821	42066723	chr13:42048821-42066723	0	+	42048821	42066135	789624	2	144,633,	0,17269,
#Deleted in new
chr13	42068931	42071093	chr13:42068931-42071093	7	-	42068931	42068931	16724991	1	2162,	0,
#Partially deleted in new
chr13	42138041	42229250	chr13:42138041-42229250	1	+	42155314	42229188	789624	28	108,105,133,107,126,103,160,109,140,85,86,100,274,123,132,118,111,97,108,114,135,164,106,93,120,109,131,152,	0,17249,17625,21224,21969,27289,28473,30398,30637,36018,40093,49007,50994,52361,56843,60436,61524,61771,67997,70917,71289,72560,76465,77533,81188,81644,83222,91057,
#Partially deleted in new
chr13	42138075	42229250	chr13:42138075-42229250	0	+	42155314	42221214	789624	28	74,105,133,107,126,103,160,109,140,85,86,100,274,123,132,118,111,97,108,114,135,164,106,93,120,109,233,152,	0,17215,17591,21190,21935,27255,28439,30364,30603,35984,40059,48973,50960,52327,56809,60402,61490,61737,67963,70883,71255,72526,76431,77499,81154,81610,83086,91023,
#Partially deleted in new
chr13	42138081	42229250	chr13:42138081-42229250	0	+	42155314	42165386	789624	25	68,105,133,103,160,109,140,85,86,100,274,123,132,118,111,97,108,114,135,164,106,93,120,109,152,	0,17209,17585,27249,28433,30358,30597,35978,40053,48967,50954,52321,56803,60396,61484,61731,67957,70877,71249,72520,76425,77493,81148,81604,91017,
#Partially deleted in new
chr13	42138084	42229753	chr13:42138084-42229753	1	+	42155314	42229188	789624	29	65,105,133,107,126,103,160,109,140,85,86,100,274,123,132,118,111,97,108,114,135,164,106,93,120,109,131,48,655,	0,17206,17582,21181,21926,27246,28430,30355,30594,35975,40050,48964,50951,52318,56800,60393,61481,61728,67954,70874,71246,72517,76422,77490,81145,81601,83179,87205,91014,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr13	42140394	42256578	chr13:42140394-42256578	0	+	42140394	42140394	789624	31	449,166,105,133,107,126,103,160,109,140,85,86,100,274,123,132,197,116,111,97,108,114,135,164,106,93,120,109,186,73,295,	0,13355,14896,15272,18871,19616,24936,26120,28045,28284,33665,37740,46654,48641,50008,54490,55368,58083,59171,59418,65644,68564,68936,70207,74112,75180,78835,79291,88704,112014,115889,
#Deleted in new
chr13	42181464	42181921	chr13:42181464-42181921	7	-	42181464	42181464	16724991	1	457,	0,
#Deleted in new
chr13	42214506	42216687	chr13:42214506-42216687	0	+	42214506	42214506	8553170	3	106,93,83,	0,1068,2098,
#Deleted in new
chr13	42255872	42256575	chr13:42255872-42256575	7	+	42255872	42255872	16724991	1	703,	0,
#Partially deleted in new
chr13	42272152	42323267	chr13:42272152-42323267	3	+	42286348	42319228	789624	13	76,50,100,117,48,135,265,4501,156,84,47,161,4180,	0,13833,14147,20232,23542,24895,26380,27210,36301,40894,41741,45375,46935,
#Partially deleted in new
chr13	42339187	42444144	chr13:42339187-42444144	3	+	42339187	42339187	8553170	8	107,122,210,272,157,94,155,178,	0,3293,45069,55144,72708,96012,98130,104779,
#Partially deleted in new
chr13	42369258	42369657	chr13:42369258-42369657	7	-	42369258	42369258	16724991	1	399,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	42562735	42607174	chr13:42562735-42607174	1	+	42581125	42606918	0	7	228,142,159,168,46,99,678,	0,3885,8844,18390,38016,38147,43761,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	42566616	42608013	chr13:42566616-42608013	1	+	42581125	42606918	0	6	146,159,168,46,99,1517,	0,4963,14509,34135,34266,39880,
#Partially deleted in new
chr13	42574152	42608012	chr13:42574152-42608012	3	+	42574303	42606918	0	5	370,168,46,99,1516,	0,6973,26599,26730,32344,
#Partially deleted in new
chr13	42574223	42606918	chr13:42574223-42606918	1	+	42581125	42606918	0	6	29,54,168,46,99,422,	0,245,6902,26528,26659,32273,
#Partially deleted in new
chr13	42574303	42606918	chr13:42574303-42606918	1	+	42574444	42606918	0	6	94,82,168,46,99,422,	0,137,6822,26448,26579,32193,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	42781549	42791547	chr13:42781549-42791547	3	+	42784067	42788790	789624	4	115,107,121,2957,	0,2510,5213,7041,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	42781614	42791549	chr13:42781614-42791549	1	+	42784067	42788790	789624	4	50,113,121,2959,	0,2439,5148,6976,
#Partially deleted in new
chr13	42810365	42812562	chr13:42810365-42812562	3	-	42810365	42810365	789624	3	265,324,171,	0,1153,2026,
#Deleted in new
chr13	42842413	42842887	chr13:42842413-42842887	3	-	42842413	42842413	8553170	2	138,89,	0,385,
#Partially deleted in new
chr13	42886387	42992249	chr13:42886387-42992249	3	-	42888493	42992165	789624	11	2115,100,74,84,94,74,84,74,84,59,272,	0,8621,13922,31153,39948,67560,76867,77678,82706,84224,105590,
#Partially deleted in new
chr13	42886387	42992230	chr13:42886387-42992230	1	-	42888249	42992165	789624	13	2115,32,100,74,84,33,94,74,84,74,84,59,253,	0,2823,8621,13922,31153,32912,39948,67560,76867,77678,82706,84224,105590,
#Partially deleted in new
chr13	42886387	42992271	chr13:42886387-42992271	0	-	42886387	42886387	8553170	11	2115,100,74,84,33,94,74,84,74,1577,294,	0,8621,13922,31153,32912,39948,67560,76867,77678,82706,105590,
#Partially deleted in new
chr13	42888493	42992165	chr13:42888493-42992165	1	-	42888493	42992165	789624	12	9,100,74,84,33,94,74,84,74,84,59,188,	0,6515,11816,29047,30806,37842,65454,74761,75572,80600,82118,103484,
#Partially deleted in new
chr13	42895008	42963583	chr13:42895008-42963583	0	-	42895008	42895008	8553170	7	100,74,84,39,74,84,130,	0,5301,22532,31382,58939,68246,68445,
#Partially deleted in new
chr13	42919303	42992180	chr13:42919303-42992180	0	-	42919303	42919303	8553170	9	29,94,74,84,74,84,59,84,203,	0,7032,34644,43951,44762,49790,51308,71795,72674,
#Partially deleted in new
chr13	42926376	42991231	chr13:42926376-42991231	0	-	42926376	42964089	789624	7	53,74,84,74,84,59,133,	0,27571,36878,37689,42717,44235,64722,
#Deleted in new
chr13	42933857	42934892	chr13:42933857-42934892	7	+	42933857	42933857	16724991	1	1035,	0,
#Partially deleted in new
chr13	42953947	42992235	chr13:42953947-42992235	0	-	42969122	42992165	789624	5	74,84,74,84,258,	0,9307,10118,15146,38030,
#Partially deleted in new
chr13	42963301	42991257	chr13:42963301-42991257	0	-	42963301	42963301	8553170	6	37,74,84,124,59,159,	0,764,5792,6325,7310,27797,
#Partially deleted in new
chr13	42969473	42992239	chr13:42969473-42992239	0	-	42969473	42969473	8553170	3	277,59,262,	0,1138,22504,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	43023202	43114224	chr13:43023202-43114224	3	+	43023626	43107248	789624	6	532,52,74,77,71,7047,	0,42483,45727,55409,62565,83975,
#Partially deleted in new
chr13	43023202	43078877	chr13:43023202-43078877	0	+	43023202	43023202	8553170	4	532,52,74,266,	0,42483,45727,55409,
#Deleted in new
chr13	43158630	43159466	chr13:43158630-43159466	3	+	43158630	43158630	8553170	2	375,172,	0,664,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	43179500	43181193	chr13:43179500-43181193	7	-	43179500	43179500	16724991	1	1693,	0,
#Partially deleted in new
chr13	43213517	43786908	chr13:43213517-43786908	3	-	43213989	43412914	789624	17	604,86,103,57,108,185,118,107,213,234,207,174,138,144,144,103,257,	0,10535,23118,51880,55952,84828,108866,112901,131020,142401,146333,147761,198398,199327,270491,453924,573134,
#Deleted in new
chr13	43359731	43361365	chr13:43359731-43361365	0	-	43359731	43359731	8553170	2	326,87,	0,1547,
#Deleted in new
chr13	43394524	43394825	chr13:43394524-43394825	7	+	43394524	43394524	16724991	1	301,	0,
#Deleted in new
chr13	43458464	43459484	chr13:43458464-43459484	3	+	43458464	43458464	8553170	2	54,555,	0,465,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	43543917	43548056	chr13:43543917-43548056	3	+	43543917	43543917	8553170	2	2383,1524,	0,2615,
#Deleted in new
chr13	43787590	43787852	chr13:43787590-43787852	3	+	43787590	43787590	8553170	1	262,	0,
#Partially deleted in new
chr13	43823908	43874926	chr13:43823908-43874926	0	-	43823908	43823908	8553170	4	103,117,399,85,	0,34872,35763,50933,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	43836351	43879690	chr13:43836351-43879690	3	-	43837279	43869376	789624	7	1078,117,399,110,159,86,60,	0,22429,23320,32342,32979,38490,43279,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	43854087	43879691	chr13:43854087-43879691	0	-	43854087	43854087	8553170	7	2535,117,399,110,159,86,61,	0,4693,5584,14606,15243,20754,25543,
#Deleted in new
chr13	43858150	43858801	chr13:43858150-43858801	0	-	43858732	43858801	789624	1	651,	0,
#Partially deleted in new
chr13	43874752	43879727	chr13:43874752-43879727	0	-	43874752	43874752	8553170	2	175,97,	0,4878,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	43877714	43878163	chr13:43877714-43878163	3	-	43877714	43877714	8553170	1	449,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	43879283	43893931	chr13:43879283-43893931	3	+	43880985	43890273	789624	7	451,596,179,166,226,161,2483,	0,1668,2901,4487,9473,10830,12165,
#Deleted in new
chr13	43879557	43881479	chr13:43879557-43881479	0	+	43880985	43881479	789624	2	177,528,	0,1394,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	43879832	43893932	chr13:43879832-43893932	1	+	43880985	43890273	789624	7	287,596,179,166,226,161,2484,	0,1119,2352,3938,8924,10281,11616,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr13	43883799	44028526	chr13:43883799-44028526	3	+	43883799	43890112	789624	13	137,226,271,122,73,93,49,93,191,194,63,59,221,	0,4957,6204,7649,23080,24884,35585,57792,58623,138675,143032,143897,144506,
#Deleted in new
chr13	43894724	43895182	chr13:43894724-43895182	3	-	43894724	43894724	8553170	1	458,	0,
#Partially deleted in new
chr13	43908668	44022660	chr13:43908668-44022660	1	+	43908668	43908668	8553170	4	108,49,191,186,	0,10716,33754,113806,
#Partially deleted in new
chr13	43908713	44026841	chr13:43908713-44026841	0	+	43908713	43908713	8553170	4	63,191,194,19,	0,33709,113761,118109,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	43908726	44030461	chr13:43908726-44030461	3	+	43908726	43908726	8553170	5	50,49,194,72,2156,	0,10658,113748,118096,119579,
#Partially deleted in new
chr13	43921571	44028526	chr13:43921571-44028526	0	+	43921571	43921571	8553170	4	108,194,72,221,	0,100903,105251,106734,
#Partially deleted in new
chr13	43968423	43971199	chr13:43968423-43971199	7	+	43968423	43968423	16724991	1	2776,	0,
#Partially deleted in new
chr13	44022058	44028552	chr13:44022058-44028552	0	+	44022058	44022058	8553170	3	610,63,247,	0,4773,6247,
#Partially deleted in new
chr13	44022326	44028504	chr13:44022326-44028504	0	+	44022326	44022326	8553170	4	342,72,77,199,	0,4496,5352,5979,
#Partially deleted in new
chr13	44022334	44028548	chr13:44022334-44028548	0	+	44022334	44022334	5263520	3	334,72,243,	0,4488,5971,
#Partially deleted in new
chr13	44022334	44028526	chr13:44022334-44028526	0	+	44022334	44022334	8553170	4	334,72,59,221,	0,4488,5362,5971,
#Partially deleted in new
chr13	44022336	44028526	chr13:44022336-44028526	0	+	44022336	44022336	8553170	2	332,221,	0,5969,
#Partially deleted in new
chr13	44022433	44028552	chr13:44022433-44028552	0	+	44022433	44022433	8553170	4	235,63,59,247,	0,4398,5263,5872,
#Partially deleted in new
chr13	44022458	44027179	chr13:44022458-44027179	0	+	44022458	44022458	8553170	2	210,357,	0,4364,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	44025318	44029937	chr13:44025318-44029937	1	+	44025318	44025318	8553170	2	1576,1632,	0,2987,
#Partially deleted in new
chr13	44106377	44137236	chr13:44106377-44137236	3	-	44106377	44106377	8553170	3	80,126,134,	0,714,30725,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	44110450	44240517	chr13:44110450-44240517	3	+	44110450	44110450	8553170	4	162,74,175,1690,	0,36331,62248,128377,
#Partially deleted in new
chr13	44142545	44148030	chr13:44142545-44148030	0	+	44142545	44142545	8553170	4	151,181,74,93,	0,1011,4236,5392,
#Partially deleted in new
chr13	44143542	44161257	chr13:44143542-44161257	3	-	44143917	44160855	789624	3	380,329,113,	0,17060,17602,
#Partially deleted in new
chr13	44143592	44238874	chr13:44143592-44238874	0	+	44143592	44143592	8553170	3	145,74,47,	0,3189,95235,
#Partially deleted in new
chr13	44143641	44154083	chr13:44143641-44154083	1	+	44143641	44143641	789624	4	96,74,139,437,	0,3140,4296,10005,
#Partially deleted in new
chr13	44146469	44158222	chr13:44146469-44158222	3	-	44146469	44146469	5263520	3	177,100,201,	0,7476,11552,
#Deleted in new
chr13	44160600	44160855	chr13:44160600-44160855	1	-	44160600	44160855	789624	1	255,	0,
#Partially deleted in new
chr13	44196005	44197298	chr13:44196005-44197298	3	+	44196005	44196005	8553170	2	257,298,	0,995,
#Partially deleted in new
chr13	44196128	44196200	chr13:44196128-44196200	3	-	44196128	44196128	5263520	1	72,	0,
#Partially deleted in new
chr13	44234117	44243192	chr13:44234117-44243192	3	-	44234117	44234117	8553170	3	3169,109,58,	0,4679,9017,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	44369364	44369877	chr13:44369364-44369877	3	-	44369364	44369364	8553170	1	513,	0,
#Partially deleted in new
chr13	44373664	44397441	chr13:44373664-44397441	0	+	44374025	44395866	789624	5	93,111,73,300,170,	0,334,5976,22119,23607,
#Partially deleted in new
chr13	44373841	44397714	chr13:44373841-44397714	3	+	44374025	44397312	789624	3	268,73,443,	0,5799,23430,
#Partially deleted in new
chr13	44373881	44397710	chr13:44373881-44397710	0	+	44374025	44390454	789624	4	228,73,222,439,	0,5759,16475,23390,
#Partially deleted in new
chr13	44379685	44391106	chr13:44379685-44391106	0	+	44379685	44390454	789624	2	28,750,	0,10671,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	44400249	44405885	chr13:44400249-44405885	3	-	44400249	44400249	789624	2	706,272,	0,5364,
#Deleted in new
chr13	44404354	44405984	chr13:44404354-44405984	1	-	44404354	44404354	8553170	2	257,371,	0,1259,
#Deleted in new
chr13	44432142	44436845	chr13:44432142-44436845	3	-	44434625	44436628	789624	3	2741,52,342,	0,3901,4361,
#Partially deleted in new
chr13	44432142	44576565	chr13:44432142-44576565	1	-	44433964	44576074	789624	2	1872,2154,	0,142269,
#Partially deleted in new
chr13	44432142	44474301	chr13:44432142-44474301	1	-	44434625	44436046	789624	3	2741,52,84,	0,3901,42075,
#Deleted in new
chr13	44432142	44437254	chr13:44432142-44437254	1	-	44434625	44436046	789624	3	2741,52,79,	0,3901,5033,
#Deleted in new
chr13	44432143	44432678	chr13:44432143-44432678	3	+	44432143	44432143	8553170	1	535,	0,
#Partially deleted in new
chr13	44433518	44576565	chr13:44433518-44576565	1	-	44434625	44576074	789624	3	1365,52,3403,	0,2525,139644,
#Deleted in new
chr13	44434566	44435284	chr13:44434566-44435284	0	-	44434566	44434566	8553170	2	317,291,	0,427,
#Deleted in new
chr13	44434708	44436596	chr13:44434708-44436596	0	-	44434708	44434708	8553170	3	175,303,93,	0,1084,1795,
#Deleted in new
chr13	44434715	44436426	chr13:44434715-44436426	0	-	44434715	44434715	8553170	2	168,383,	0,1328,
#Partially deleted in new
chr13	44436503	44474250	chr13:44436503-44474250	0	-	44436503	44436628	789624	3	146,170,33,	0,672,37714,
#Partially deleted in new
chr13	44437056	44464921	chr13:44437056-44464921	7	+	44437056	44437056	16724991	4	236,86,187,301,	0,14361,15579,27564,
#Partially deleted in new
chr13	44437206	44452827	chr13:44437206-44452827	4	+	44437206	44437206	16724991	3	86,86,192,	0,14211,15429,
#Deleted in new
chr13	44452600	44452822	chr13:44452600-44452822	5	+	44452600	44452600	16724991	1	222,	0,
#Partially deleted in new
chr13	44538325	44573345	chr13:44538325-44573345	0	-	44538325	44538325	8553170	3	563,157,183,	0,1441,34837,
#Partially deleted in new
chr13	44538325	44573522	chr13:44538325-44573522	0	-	44539848	44573522	789624	3	563,170,360,	0,1441,34837,
#Deleted in new
chr13	44538721	44540033	chr13:44538721-44540033	0	-	44538721	44538721	8553170	2	167,267,	0,1045,
#Deleted in new
chr13	44575647	44577147	chr13:44575647-44577147	0	-	44575647	44576074	789624	2	599,91,	0,1409,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	44575892	44580432	chr13:44575892-44580432	3	+	44575892	44575892	789624	3	378,136,2331,	0,1149,2209,
#Deleted in new
chr13	44577489	44579147	chr13:44577489-44579147	0	+	44577489	44577489	8553170	1	1658,	0,
#Deleted in new
chr13	44594857	44596082	chr13:44594857-44596082	7	+	44594857	44594857	16724991	1	1225,	0,
#Partially deleted in new
chr13	44651811	44701016	chr13:44651811-44701016	3	+	44651811	44651811	8553170	3	57,141,97,	0,12083,49108,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	44684486	44715393	chr13:44684486-44715393	3	-	44684486	44684486	8553170	2	322,93,	0,30814,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	44799502	44809630	chr13:44799502-44809630	3	-	44799502	44799502	789624	3	1503,311,222,	0,5217,9906,
#Partially deleted in new
chr13	44939248	44989483	chr13:44939248-44989483	3	-	44941205	44989436	0	10	2074,233,117,194,93,77,63,99,83,459,	0,4193,10473,20132,26595,39941,40641,41473,42823,49776,
#Partially deleted in new
chr13	44982076	45083125	chr13:44982076-45083125	3	-	44982076	44982076	8553170	3	78,149,88,	0,64516,100961,
#Deleted in new
chr13	44989528	44990427	chr13:44989528-44990427	1	+	44989654	44989957	789624	1	899,	0,
#Partially deleted in new
chr13	44989551	45028270	chr13:44989551-45028270	3	+	44989654	45028003	789624	8	191,133,102,85,132,165,99,486,	0,14753,16650,19243,25400,25880,30778,38233,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	44989563	45030305	chr13:44989563-45030305	1	+	44989654	45028003	789624	8	179,127,102,85,132,165,99,2521,	0,14747,16638,19231,25388,25868,30766,38221,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	44989614	45002040	chr13:44989614-45002040	0	+	44989614	44989614	8553170	2	128,338,	0,12088,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr13	44989619	45033602	chr13:44989619-45033602	0	+	44989654	45028003	789624	10	123,133,102,85,132,165,99,219,2869,367,	0,14685,16582,19175,25332,25812,30710,38165,39619,43616,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	45002149	45002447	chr13:45002149-45002447	3	+	45002149	45002149	8553170	1	298,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	45005109	45037669	chr13:45005109-45037669	1	+	45015053	45028003	789624	8	132,102,85,132,165,99,219,4434,	0,1092,3685,9842,10322,15220,22675,28126,
#Partially deleted in new
chr13	45031203	45033611	chr13:45031203-45033611	0	+	45031203	45031203	8553170	2	904,376,	0,2032,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	45060728	45061086	chr13:45060728-45061086	3	+	45060728	45060728	8553170	1	358,	0,
#Partially deleted in new
chr13	45120514	45284909	chr13:45120514-45284909	3	+	45120655	45283561	0	8	207,74,19,145,82,100,144,1468,	0,16218,29255,31172,86909,132356,146718,162927,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	45123092	45123414	chr13:45123092-45123414	3	+	45123092	45123092	8553170	1	322,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	45124014	45124143	chr13:45124014-45124143	7	-	45124014	45124014	16724991	1	129,	0,
#Deleted in new
chr13	45192852	45194717	chr13:45192852-45194717	3	-	45193787	45194567	789624	1	1865,	0,
#Partially deleted in new
chr13	45206354	45267333	chr13:45206354-45267333	0	+	45206354	45206354	8553170	3	1151,100,101,	0,46516,60878,
#Partially deleted in new
chr13	45219352	45267363	chr13:45219352-45267363	0	+	45219352	45219352	8553170	4	267,44,100,131,	0,1513,33518,47880,
#Deleted in new
chr13	45263689	45263915	chr13:45263689-45263915	7	+	45263689	45263689	16724991	1	226,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	45333470	45341370	chr13:45333470-45341370	3	-	45337385	45341069	0	6	3918,117,106,191,74,329,	0,5189,6026,6523,7241,7571,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	45333470	45341284	chr13:45333470-45341284	1	-	45337475	45341069	789624	6	4083,117,106,191,74,243,	0,5189,6026,6523,7241,7571,
#Partially deleted in new
chr13	45336313	45336447	chr13:45336313-45336447	3	-	45336313	45336313	789624	1	134,	0,
#Partially deleted in new
chr13	45336872	45341212	chr13:45336872-45341212	1	-	45337385	45340184	0	5	516,117,106,191,171,	0,1787,2624,3121,4169,
#Partially deleted in new
chr13	45336898	45339533	chr13:45336898-45339533	0	-	45337475	45339533	789624	4	490,87,117,37,	0,568,1761,2598,
#Partially deleted in new
chr13	45337052	45340402	chr13:45337052-45340402	0	-	45337052	45337052	8553170	5	336,117,106,191,51,	0,1607,2444,2941,3299,
#Partially deleted in new
chr13	45337063	45339848	chr13:45337063-45339848	0	-	45337063	45337063	8553170	3	325,117,352,	0,1596,2433,
#Partially deleted in new
chr13	45337176	45341155	chr13:45337176-45341155	0	-	45337176	45337176	8553170	3	212,1525,114,	0,1483,3865,
#Partially deleted in new
chr13	45337176	45340258	chr13:45337176-45340258	0	-	45337176	45337176	8553170	3	212,117,265,	0,1483,2817,
#Partially deleted in new
chr13	45337177	45339533	chr13:45337177-45339533	0	-	45337475	45339533	789624	3	376,117,37,	0,1482,2319,
#Partially deleted in new
chr13	45337197	45341122	chr13:45337197-45341122	1	-	45337385	45340777	789624	6	191,117,106,191,74,85,	0,1462,2299,2796,3514,3840,
#Partially deleted in new
chr13	45337301	45341158	chr13:45337301-45341158	1	-	45337385	45340184	0	5	87,117,106,191,447,	0,1358,2195,2692,3410,
#Partially deleted in new
chr13	45337479	45337609	chr13:45337479-45337609	3	-	45337479	45337479	789624	1	130,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	45338184	45341086	chr13:45338184-45341086	1	-	45338608	45341069	789624	5	592,106,191,74,45,	0,1312,1809,2527,2857,
#Partially deleted in new
chr13	45338686	45341158	chr13:45338686-45341158	0	-	45338686	45340810	789624	5	90,106,191,109,117,	0,810,1307,2025,2355,
#Partially deleted in new
chr13	45340025	45341183	chr13:45340025-45341183	0	-	45340025	45340025	8553170	2	760,142,	0,1016,
#Partially deleted in new
chr13	45340038	45341183	chr13:45340038-45341183	3	+	45340038	45340038	8553170	2	456,132,	0,1013,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr13	45341344	45393413	chr13:45341344-45393413	3	+	45341344	45341344	789624	11	43,115,68,103,155,142,141,76,145,86,2382,	0,2081,3034,28735,35716,37185,37850,38581,41746,48390,49687,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	45341418	45369916	chr13:45341418-45369916	1	+	45341418	45341418	8553170	5	212,142,156,118,116,	0,2886,3335,10478,28382,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	45341419	45377127	chr13:45341419-45377127	1	+	45341419	45341419	8553170	4	195,118,224,67,	0,10477,28539,35641,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	45341512	45370507	chr13:45341512-45370507	0	+	45341512	45341512	8553170	3	102,118,549,	0,2816,28446,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	45341512	45391737	chr13:45341512-45391737	0	+	45341512	45341512	8553170	8	102,142,155,142,807,145,86,706,	0,2792,35548,37017,37682,41578,48222,49519,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	45341591	45370330	chr13:45341591-45370330	0	+	45341591	45341591	8553170	3	39,142,372,	0,2713,28367,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	45341598	45360486	chr13:45341598-45360486	1	+	45341598	45341598	8553170	3	32,142,346,	0,2706,18542,
#Partially deleted in new
chr13	45350322	45351350	chr13:45350322-45351350	3	+	45350322	45350322	8553170	2	224,86,	0,942,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	45374933	45378616	chr13:45374933-45378616	0	+	45374933	45374933	8553170	2	2282,87,	0,3596,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	45382824	45391352	chr13:45382824-45391352	0	+	45382824	45382824	8553170	4	411,79,86,321,	0,935,6910,8207,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	45387584	45391475	chr13:45387584-45391475	0	+	45387584	45387584	8553170	3	2236,189,444,	0,3129,3447,
#Partially deleted in new
chr13	45389793	45391376	chr13:45389793-45391376	0	+	45389793	45389793	8553170	2	27,345,	0,1238,
#Partially deleted in new
chr13	45390352	45391267	chr13:45390352-45391267	7	-	45390352	45390352	16724991	1	915,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	45390744	45391548	chr13:45390744-45391548	0	+	45390744	45390744	8553170	2	114,517,	0,287,
#Partially deleted in new
chr13	45393315	45418380	chr13:45393315-45418380	3	-	45395973	45411425	789624	10	2700,81,139,125,96,86,95,148,119,81,	0,3942,5624,7767,8959,11011,12567,15611,18046,24984,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	45393315	45404383	chr13:45393315-45404383	0	-	45393315	45393315	8553170	4	5763,125,96,57,	0,7767,8959,11011,
#Partially deleted in new
chr13	45393333	45418455	chr13:45393333-45418455	1	-	45395973	45408985	789624	9	2682,81,139,125,96,86,95,148,156,	0,3924,5606,7749,8941,10993,12549,15593,24966,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr13	45395947	45418378	chr13:45395947-45418378	0	-	45405927	45411425	789624	10	68,81,139,125,96,86,95,119,206,79,	0,1310,2992,5135,6327,8379,9935,15414,15785,22352,
#Partially deleted in new
chr13	45397886	45402357	chr13:45397886-45402357	0	-	45398052	45402357	789624	4	178,139,125,83,	0,1053,3196,4388,
#Partially deleted in new
chr13	45401131	45418380	chr13:45401131-45418380	0	-	45401131	45408985	789624	6	76,96,86,95,148,81,	0,1143,3195,4751,7795,17168,
#Partially deleted in new
chr13	45401187	45418455	chr13:45401187-45418455	0	-	45401187	45405964	789624	5	20,96,86,95,156,	0,1087,3139,4695,17112,
#Partially deleted in new
chr13	45402325	45418380	chr13:45402325-45418380	0	-	45405927	45411425	789624	5	45,86,95,119,81,	0,2001,3557,9036,15974,
#Partially deleted in new
chr13	45418161	45420371	chr13:45418161-45420371	3	+	45418161	45418161	789624	2	577,124,	0,2086,
#Deleted in new
chr13	45436120	45436660	chr13:45436120-45436660	7	+	45436120	45436120	16724991	1	540,	0,
#Deleted in new
chr13	45464897	45465658	chr13:45464897-45465658	0	+	45464897	45464897	8553170	2	313,218,	0,543,
#Partially deleted in new
chr13	45464924	45536630	chr13:45464924-45536630	3	+	45465036	45534731	789624	23	286,147,62,166,75,93,126,81,44,127,92,140,161,106,125,90,121,89,135,76,128,99,1929,	0,11276,14080,15200,16305,17456,18305,21570,25990,26487,27234,28422,31227,38319,44767,46840,51218,53837,54035,60051,64866,65757,69777,
#Partially deleted in new
chr13	45465004	45493936	chr13:45465004-45493936	1	+	45465036	45493494	789624	12	206,147,62,166,75,93,126,81,44,127,92,590,	0,11196,14000,15120,16225,17376,18225,21490,25910,26407,27154,28342,
#Partially deleted in new
chr13	45465063	45466624	chr13:45465063-45466624	0	+	45465063	45466624	789624	2	147,108,	0,1453,
#Deleted in new
chr13	45465284	45465814	chr13:45465284-45465814	0	+	45465284	45465284	8553170	1	530,	0,
#Partially deleted in new
chr13	45491468	45511998	chr13:45491468-45511998	0	+	45491468	45491468	8553170	7	70,92,140,161,106,125,234,	0,690,1878,4683,11775,18223,20296,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	45516146	45532109	chr13:45516146-45532109	0	+	45516146	45529803	789624	6	117,76,128,99,159,100,	0,8829,13644,14535,15004,15863,
#Partially deleted in new
chr13	45534521	45550268	chr13:45534521-45550268	0	-	45534521	45534521	8553170	3	345,153,110,	0,15371,15637,
#Partially deleted in new
chr13	45541296	45615739	chr13:45541296-45615739	3	-	45541461	45597005	789624	15	384,226,153,86,158,62,137,89,42,63,170,49,695,52,55,	0,3463,8596,8934,20072,22430,27018,33545,38636,39306,45766,49352,55072,66267,74388,
#Partially deleted in new
chr13	45544759	45555467	chr13:45544759-45555467	0	-	45544759	45544759	8553170	4	226,153,158,38,	0,5133,5399,10670,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	45551484	45551603	chr13:45551484-45551603	7	-	45551484	45551484	16724991	1	119,	0,
#Deleted in new
chr13	45552862	45553136	chr13:45552862-45553136	7	-	45552862	45552862	16724991	1	274,	0,
#Partially deleted in new
chr13	45563662	45615724	chr13:45563662-45615724	0	-	45563662	45563662	8553170	9	126,137,89,42,63,170,49,695,40,	0,4652,11179,16270,16940,23400,26986,32706,52022,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	45671844	45672391	chr13:45671844-45672391	7	+	45671844	45671844	16724991	1	547,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	45680183	45701184	chr13:45680183-45701184	3	-	45680183	45680183	789624	4	1308,118,137,158,	0,2118,4880,20843,
#Deleted in new
chr13	45687547	45688469	chr13:45687547-45688469	7	-	45687547	45687547	16724991	1	922,	0,
#Partially deleted in new
chr13	45702310	45714558	chr13:45702310-45714558	3	+	45702390	45714372	789624	3	155,81,1377,	0,464,10871,
#Partially deleted in new
chr13	45702319	45713586	chr13:45702319-45713586	0	+	45702390	45713586	789624	2	146,405,	0,10862,
#Partially deleted in new
chr13	45702468	45714558	chr13:45702468-45714558	1	+	45703543	45714372	789624	3	47,81,1377,	0,1042,10713,
#Partially deleted in new
chr13	45703127	45714559	chr13:45703127-45714559	1	+	45703543	45714372	789624	2	464,1378,	0,10054,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	45732081	45732356	chr13:45732081-45732356	3	-	45732081	45732081	8553170	1	275,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	45777242	45851736	chr13:45777242-45851736	3	-	45783382	45851629	789624	2	6815,242,	0,74252,
#Partially deleted in new
chr13	45954464	46052746	chr13:45954464-46052746	1	-	45957126	46045507	789624	19	2833,164,201,150,525,1224,104,556,192,465,311,198,158,140,109,112,110,123,343,	0,5018,9377,10815,13039,14283,15897,20818,25348,30832,34322,48674,55883,56950,65984,87699,90490,90926,97939,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr13	45962175	46052759	chr13:45962175-46052759	3	-	45963821	46045507	789624	17	1867,153,525,1224,104,556,192,465,311,198,158,140,109,112,110,126,62,	0,3104,5328,6572,8186,13107,17637,23121,26611,40963,48172,49239,58273,79988,82779,83215,90522,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	46001162	46011555	chr13:46001162-46011555	0	-	46001162	46001162	8553170	4	298,198,158,141,	0,1976,9185,10252,
#Partially deleted in new
chr13	46010149	46020487	chr13:46010149-46020487	0	-	46010334	46020487	789624	3	356,140,39,	0,1265,10299,
#Partially deleted in new
chr13	46042156	46052685	chr13:46042156-46052685	0	-	46042156	46045507	789624	5	119,110,126,58,282,	0,2798,3234,9775,10247,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	46052805	46096531	chr13:46052805-46096531	0	+	46052805	46052805	8553170	3	160,150,255,	0,42047,43471,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	46052839	46122670	chr13:46052839-46122670	3	+	46052839	46052839	8553170	6	126,150,290,413,324,2674,	0,42013,44270,45558,60344,67157,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	46052847	46100024	chr13:46052847-46100024	0	+	46052847	46052847	789624	4	118,150,290,1627,	0,42005,44262,45550,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	46052847	46101347	chr13:46052847-46101347	1	+	46052847	46052847	789624	3	118,150,2950,	0,42005,45550,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	46052901	46113332	chr13:46052901-46113332	1	+	46052901	46052901	8553170	4	64,150,384,149,	0,41951,45496,60282,
#Partially deleted in new
chr13	46053194	46105033	chr13:46053194-46105033	3	-	46053613	46105009	0	11	604,88,203,94,111,105,102,109,125,76,98,	0,2567,4984,11453,14112,20678,25605,29246,31024,34550,51741,
#Partially deleted in new
chr13	46053194	46105018	chr13:46053194-46105018	1	-	46053613	46105009	0	11	604,88,203,94,111,105,102,109,125,76,83,	0,2567,4984,11453,14112,20678,25605,29246,31024,34550,51741,
#Partially deleted in new
chr13	46053216	46105028	chr13:46053216-46105028	1	-	46053613	46105009	789624	10	582,88,203,94,105,102,109,125,76,93,	0,2545,4962,11431,20656,25583,29224,31002,34528,51719,
#Partially deleted in new
chr13	46125919	46211348	chr13:46125919-46211348	3	-	46127590	46159662	0	19	1804,125,124,134,115,79,196,96,143,166,82,133,130,164,88,115,64,130,56,	0,4894,8207,16372,17370,18522,20988,22432,25016,26860,28885,30518,32602,32906,33679,56191,57989,77181,85373,
#Partially deleted in new
chr13	46125925	46182324	chr13:46125925-46182324	1	-	46127590	46159662	0	16	1798,125,124,134,115,79,196,96,143,166,82,133,130,164,88,214,	0,4888,8201,16366,17364,18516,20982,22426,25010,26854,28879,30512,32596,32900,33673,56185,
#Deleted in new
chr13	46146905	46153265	chr13:46146905-46153265	0	-	46146905	46146905	8553170	5	198,96,143,166,127,	0,1446,4030,5874,6233,
#Deleted in new
chr13	46148351	46153243	chr13:46148351-46153243	0	-	46148351	46148351	8553170	5	96,27,143,166,105,	0,430,2584,4428,4787,
#Partially deleted in new
chr13	46152780	46168519	chr13:46152780-46168519	0	-	46152780	46159662	789624	7	165,82,133,130,164,88,57,	0,2024,3657,5741,6045,6818,15682,
#Partially deleted in new
chr13	46158855	46211871	chr13:46158855-46211871	0	-	46158855	46159662	789624	7	134,88,115,64,82,130,140,	0,743,23255,25053,35168,44245,52876,
#Partially deleted in new
chr13	46159015	46182204	chr13:46159015-46182204	0	-	46159015	46159015	8553170	2	671,94,	0,23095,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	46169457	46169748	chr13:46169457-46169748	3	-	46169457	46169457	8553170	1	291,	0,
#Partially deleted in new
chr13	46211942	46276803	chr13:46211942-46276803	3	+	46213034	46276803	789624	10	317,118,678,69,158,99,137,84,240,214,	0,1059,15569,16722,22249,34584,38412,49966,54790,64647,
#Partially deleted in new
chr13	46211947	46266941	chr13:46211947-46266941	0	+	46213034	46266941	789624	9	312,118,678,69,158,99,137,84,209,	0,1054,15564,16717,22244,34579,38407,49961,54785,
#Partially deleted in new
chr13	46213034	46277366	chr13:46213034-46277366	1	+	46213034	46276803	789624	9	85,678,69,158,99,137,84,240,777,	0,14477,15630,21157,33492,37320,48874,53698,63555,
#Deleted in new
chr13	46249941	46250213	chr13:46249941-46250213	3	+	46249941	46249941	8553170	1	272,	0,
#Deleted in new
chr13	46270076	46270617	chr13:46270076-46270617	7	+	46270076	46270076	16724991	1	541,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	46296444	46297844	chr13:46296444-46297844	3	-	46296444	46296444	789624	1	1400,	0,
#Partially deleted in new
chr13	46341999	46387500	chr13:46341999-46387500	1	-	46343384	46377953	789624	14	1498,91,154,62,239,65,146,133,61,99,208,83,116,367,	0,2741,3447,7286,8113,14432,17486,19441,20538,21115,26042,26733,35890,45134,
#Partially deleted in new
chr13	46341999	46387500	chr13:46341999-46387500	1	-	46343384	46368222	789624	13	1498,91,154,62,239,65,146,133,61,99,208,83,367,	0,2741,3447,7286,8113,14432,17486,19441,20538,21115,26042,26733,45134,
#Partially deleted in new
chr13	46341999	46387500	chr13:46341999-46387500	1	-	46343384	46372475	789624	15	1498,91,154,62,239,65,146,133,61,99,208,83,657,116,367,	0,2741,3447,7286,8113,14432,17486,19441,20538,21115,26042,26733,29941,35890,45134,
#Partially deleted in new
chr13	46342000	46390042	chr13:46342000-46390042	3	-	46343384	46372475	789624	15	1497,91,154,62,239,65,146,133,61,99,208,83,657,203,258,	0,2740,3446,7285,8112,14431,17485,19440,20537,21114,26041,26732,29940,45676,47784,
#Partially deleted in new
chr13	46342963	46387233	chr13:46342963-46387233	1	-	46343384	46377953	789624	15	534,91,154,62,239,65,146,133,61,99,208,83,270,116,100,	0,1777,2483,6322,7149,13468,16522,18477,19574,20151,25078,25769,28977,34926,44170,
#Partially deleted in new
chr13	46342963	46387486	chr13:46342963-46387486	1	-	46343311	46372475	789624	13	534,91,62,239,65,146,133,61,99,208,83,657,353,	0,1777,6322,7149,13468,16522,18477,19574,20151,25078,25769,28977,44170,
#Partially deleted in new
chr13	46342963	46387235	chr13:46342963-46387235	0	-	46363179	46372475	789624	15	534,91,154,62,239,65,146,133,61,99,212,83,657,116,102,	0,1777,2483,6322,7149,13468,16522,18477,19574,20151,25074,25769,28977,34926,44170,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	46342963	46351007	chr13:46342963-46351007	0	-	46342963	46342963	8553170	5	534,91,154,62,895,	0,1777,2483,6322,7149,
#Partially deleted in new
chr13	46342966	46438190	chr13:46342966-46438190	1	-	46343384	46377953	789624	15	531,91,154,62,239,65,146,133,61,99,208,83,116,203,806,	0,1774,2480,6319,7146,13465,16519,18474,19571,20148,25075,25766,34923,44710,94418,
#Partially deleted in new
chr13	46343279	46387252	chr13:46343279-46387252	1	-	46343384	46372070	789624	14	218,91,154,62,239,65,146,133,61,99,208,83,270,119,	0,1461,2167,6006,6833,13152,16206,18161,19258,19835,24762,25453,28661,43854,
#Partially deleted in new
chr13	46368073	46387230	chr13:46368073-46387230	0	-	46368073	46372070	789624	4	176,83,138,97,	0,659,3867,19060,
#Partially deleted in new
chr13	46371940	46378645	chr13:46371940-46378645	0	-	46371940	46372475	789624	3	657,116,199,	0,5949,6506,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	46374400	46374590	chr13:46374400-46374590	3	-	46374400	46374400	8553170	1	190,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	46410453	46410557	chr13:46410453-46410557	3	+	46410453	46410453	8553170	1	104,	0,
#Deleted in new
chr13	46437393	46437988	chr13:46437393-46437988	7	-	46437393	46437393	16724991	1	595,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	46455131	46463828	chr13:46455131-46463828	0	-	46455131	46455131	8553170	4	380,74,226,171,	0,2708,5813,8526,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	46455131	46462026	chr13:46455131-46462026	1	-	46455131	46455131	8553170	3	380,74,1082,	0,2708,5813,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	46455134	46468315	chr13:46455134-46468315	1	-	46455134	46455134	8553170	7	377,74,226,145,145,101,577,	0,2705,5810,9540,10708,11474,12604,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	46455134	46467872	chr13:46455134-46467872	1	-	46455134	46455134	8553170	8	377,74,226,86,145,79,101,134,	0,2705,5810,8799,9540,10774,11474,12604,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	46455134	46467881	chr13:46455134-46467881	0	-	46455134	46455134	8553170	7	377,74,226,145,145,101,148,	0,2705,5810,9540,10708,11474,12599,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	46455134	46467872	chr13:46455134-46467872	0	-	46455134	46455134	8553170	7	377,74,226,145,145,101,200,	0,2705,5810,9540,10708,11474,12538,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	46455134	46466179	chr13:46455134-46466179	0	-	46455134	46455134	8553170	5	377,74,226,145,337,	0,2705,5810,9540,10708,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	46455137	46467836	chr13:46455137-46467836	1	-	46455137	46455137	8553170	7	374,74,141,145,145,101,98,	0,2702,5807,9537,10705,11471,12601,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	46455138	46467857	chr13:46455138-46467857	1	-	46455138	46455138	8553170	7	373,74,226,145,145,101,197,	0,2701,5806,9536,10704,11470,12522,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	46455202	46463496	chr13:46455202-46463496	0	-	46455202	46455202	8553170	4	309,74,226,27,	0,2637,5742,8267,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	46455202	46462367	chr13:46455202-46462367	0	-	46455202	46455202	8553170	4	309,74,226,326,	0,2637,5742,6839,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	46455202	46465457	chr13:46455202-46465457	0	-	46455202	46455202	8553170	4	309,74,226,783,	0,2637,5742,9472,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	46455290	46466783	chr13:46455290-46466783	1	-	46455290	46455290	8553170	4	221,74,76,175,	0,2549,9384,11318,
#Partially deleted in new
chr13	46455352	46458238	chr13:46455352-46458238	1	-	46455352	46455352	8553170	2	159,399,	0,2487,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	46457907	46466776	chr13:46457907-46466776	1	-	46457907	46457907	8553170	5	6,226,79,79,168,	0,3037,6833,8001,8701,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	46458060	46459185	chr13:46458060-46459185	7	-	46458060	46458060	16724991	1	1125,	0,
#Partially deleted in new
chr13	46459041	46459324	chr13:46459041-46459324	5	-	46459041	46459041	16724991	1	283,	0,
#Deleted in new
chr13	46460608	46461121	chr13:46460608-46461121	7	+	46460608	46460608	16724991	1	513,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	46474245	46493268	chr13:46474245-46493268	3	+	46474245	46474245	8553170	3	89,78,148,	0,18637,18875,
#Deleted in new
chr13	46490929	46491121	chr13:46490929-46491121	7	+	46490929	46490929	16724991	1	192,	0,
#Deleted in new
chr13	46505117	46505436	chr13:46505117-46505436	7	+	46505117	46505117	16724991	1	319,	0,
#Partially deleted in new
chr13	46553167	46753040	chr13:46553167-46753040	1	+	46553396	46750650	789624	19	536,145,127,106,137,128,64,106,125,68,87,90,37,54,73,110,138,78,2501,	0,97033,115862,128573,132737,134684,135965,139368,141725,146168,147953,151900,152100,158623,159357,170053,175679,180753,197372,
#Partially deleted in new
chr13	46553169	46705620	chr13:46553169-46705620	0	+	46553169	46553169	8553170	13	534,145,127,106,137,128,64,106,125,68,87,90,353,	0,97031,115860,128571,132735,134682,135963,139366,141723,146166,147951,151898,152098,
#Partially deleted in new
chr13	46553199	46743595	chr13:46553199-46743595	3	+	46553396	46741848	789624	19	504,145,127,106,137,128,64,106,125,68,87,90,37,54,73,110,138,78,1954,	0,97001,115830,128541,132705,134652,135933,139336,141693,146136,147921,151868,152068,158591,159325,170021,175647,180721,188442,
#Partially deleted in new
chr13	46553259	46742733	chr13:46553259-46742733	1	+	46553396	46741848	789624	20	444,145,127,106,137,128,64,106,125,68,87,90,37,54,73,105,110,138,78,1092,	0,96941,115770,128481,132645,134592,135873,139276,141633,146076,147861,151808,152008,158531,159265,162300,169961,175587,180661,188382,
#Partially deleted in new
chr13	46679835	46692577	chr13:46679835-46692577	0	+	46685981	46692577	789624	6	77,106,137,128,64,42,	0,1905,6069,8016,9297,12700,
#Partially deleted in new
chr13	46680033	46689161	chr13:46680033-46689161	0	+	46685981	46689161	789624	5	145,106,137,128,29,	0,1707,5871,7818,9099,
#Deleted in new
chr13	46717422	46717688	chr13:46717422-46717688	3	+	46717422	46717422	8553170	1	266,	0,
#Partially deleted in new
chr13	46771255	46797232	chr13:46771255-46797232	3	-	46771415	46791413	0	10	241,168,99,120,125,99,89,75,48,128,	0,6200,8679,10240,11411,12996,15765,20090,22141,25849,
#Partially deleted in new
chr13	46771334	46797133	chr13:46771334-46797133	1	-	46771415	46787090	789624	11	162,168,99,120,125,99,89,65,75,48,29,	0,6121,8600,10161,11332,12917,15686,19262,20011,22062,25770,
#Partially deleted in new
chr13	46775382	46784350	chr13:46775382-46784350	0	-	46775611	46784350	789624	6	310,168,99,120,125,99,	0,2073,4552,6113,7284,8869,
#Partially deleted in new
chr13	46775385	46781568	chr13:46775385-46781568	0	-	46777434	46781568	789624	3	2238,99,73,	0,4549,6110,
#Partially deleted in new
chr13	46779953	46793438	chr13:46779953-46793438	0	-	46779953	46779953	8553170	8	80,120,125,99,71,89,75,42,	0,1542,2713,4298,5695,7067,11392,13443,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	46831549	46896038	chr13:46831549-46896038	1	-	46834836	46895906	789624	3	4090,201,544,	0,60840,63945,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	46831554	46897076	chr13:46831554-46897076	3	-	46834836	46895906	789624	4	4085,201,740,403,	0,60835,63940,65119,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	46831554	46897076	chr13:46831554-46897076	1	-	46834836	46896833	789624	3	4085,201,403,	0,60835,65119,
#Deleted in new
chr13	46895304	46895813	chr13:46895304-46895813	0	-	46895480	46895813	789624	1	509,	0,
#Partially deleted in new
chr13	47307081	47307301	chr13:47307081-47307301	7	+	47307081	47307081	16724991	1	220,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	47458940	47459234	chr13:47458940-47459234	3	-	47458940	47458940	8553170	1	294,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr13	47745735	48001291	chr13:47745735-48001291	0	-	47943370	48001269	0	14	1689,70,118,101,89,121,143,162,139,129,163,100,181,112,	0,159593,161282,197609,203204,203747,208404,208660,222859,227528,242805,243146,251107,255444,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	47746437	47935821	chr13:47746437-47935821	0	-	47746437	47746437	8553170	8	987,211,250,106,118,122,90,907,	0,50564,51821,60956,160580,160893,186256,188477,
#Deleted in new
chr13	47763459	47764606	chr13:47763459-47764606	7	+	47763459	47763459	16724991	1	1147,	0,
#Deleted in new
chr13	47766639	47767085	chr13:47766639-47767085	7	-	47766639	47766639	16724991	1	446,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	47825329	47835956	chr13:47825329-47835956	3	-	47825329	47825329	8553170	3	98,152,161,	0,809,10466,
#Partially deleted in new
chr13	47905328	47907357	chr13:47905328-47907357	0	-	47905328	47905328	8553170	3	70,118,27,	0,1689,2002,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	47930152	47932622	chr13:47930152-47932622	3	-	47930152	47930152	789624	1	2470,	0,
#Partially deleted in new
chr13	47936490	47949561	chr13:47936490-47949561	0	-	47943370	47949561	789624	4	283,101,89,79,	0,6854,12449,12992,
#Partially deleted in new
chr13	47936501	47939363	chr13:47936501-47939363	0	-	47936501	47936501	8553170	2	272,97,	0,2765,
#Partially deleted in new
chr13	47942655	48001354	chr13:47942655-48001354	3	-	47943370	48001269	0	11	790,89,121,143,162,139,129,163,100,181,175,	0,6284,6827,11484,11740,25939,30608,45885,46226,54187,58524,
#Partially deleted in new
chr13	47942655	48001273	chr13:47942655-48001273	1	-	47943370	48001269	0	11	790,89,121,143,162,139,129,163,100,181,94,	0,6284,6827,11484,11740,25939,30608,45885,46226,54187,58524,
#Partially deleted in new
chr13	47942660	48001305	chr13:47942660-48001305	1	-	47943370	48001269	789624	12	785,89,121,143,162,63,139,129,163,100,181,126,	0,6279,6822,11479,11735,22917,25934,30603,45880,46221,54182,58519,
#Partially deleted in new
chr13	47942688	48037942	chr13:47942688-48037942	1	-	47943370	47996939	789624	11	757,89,121,143,162,139,129,163,100,181,337,	0,6251,6794,11451,11707,25906,30575,45852,46193,54154,94917,
#Partially deleted in new
chr13	47942728	48001278	chr13:47942728-48001278	0	-	47991566	48001269	789624	13	717,89,121,143,162,139,129,163,100,176,97,181,99,	0,6211,6754,11411,11667,25866,30535,45812,46153,48774,52071,54114,58451,
#Partially deleted in new
chr13	47942780	48001020	chr13:47942780-48001020	1	-	47943370	47996939	789624	11	665,89,121,143,162,139,129,163,100,181,114,	0,6159,6702,11359,11615,25814,30483,45760,46101,54062,58126,
#Partially deleted in new
chr13	47943360	47954554	chr13:47943360-47954554	0	-	47943360	47943360	8553170	4	85,89,121,415,	0,5579,6122,10779,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	47948939	47988548	chr13:47948939-47988548	0	-	47956840	47988548	789624	8	89,121,143,162,39,139,129,8,	0,543,5200,5456,7900,19655,24324,39601,
#Partially deleted in new
chr13	47954142	48001240	chr13:47954142-48001240	0	-	47954142	48001240	789624	7	140,162,139,129,163,100,61,	0,253,14452,19121,34398,34739,47037,
#Partially deleted in new
chr13	47954452	48001273	chr13:47954452-48001273	0	-	47954452	48001269	789624	4	105,139,129,94,	0,14142,18811,46727,
#Partially deleted in new
chr13	47956872	48001266	chr13:47956872-48001266	0	-	47988935	48001266	789624	8	6,139,129,163,100,97,181,87,	0,11722,16391,31668,32009,37927,39970,44307,
#Partially deleted in new
chr13	47971452	48001293	chr13:47971452-48001293	1	-	47971871	48001269	789624	6	431,129,163,100,181,114,	0,1811,17088,17429,25390,29727,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	47971680	48001279	chr13:47971680-48001279	1	-	47972083	48001269	789624	6	406,129,163,100,181,100,	0,1583,16860,17201,25162,29499,
#Partially deleted in new
chr13	47987633	48001273	chr13:47987633-48001273	1	-	47988498	48001269	789624	4	1070,100,181,94,	0,1248,9209,13546,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	47996912	48037968	chr13:47996912-48037968	0	-	47996912	47996939	789624	3	111,78,363,	0,18258,40693,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	48001388	48002552	chr13:48001388-48002552	3	+	48001388	48001388	8553170	2	434,118,	0,1046,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	48037566	48047222	chr13:48037566-48047222	3	+	48037746	48045799	0	3	338,197,1563,	0,3353,8093,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	48041750	48042184	chr13:48041750-48042184	3	-	48041750	48041750	8553170	1	434,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	48053322	48079975	chr13:48053322-48079975	0	-	48053322	48079975	789624	3	169,159,132,	0,23830,26521,
#Partially deleted in new
chr13	48075955	48095104	chr13:48075955-48095104	3	-	48077138	48095078	789624	7	1356,132,87,58,171,67,151,	0,3888,5689,7415,10326,14396,18998,
#Partially deleted in new
chr13	48076967	48095131	chr13:48076967-48095131	1	-	48077138	48090405	789624	7	344,132,87,58,171,67,72,	0,2876,4677,6403,9314,13384,18092,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	48077136	48079991	chr13:48077136-48079991	3	+	48077136	48077136	789624	3	215,112,215,	0,305,2640,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	48077170	48095068	chr13:48077170-48095068	0	-	48077170	48093606	789624	8	141,132,87,58,171,67,140,115,	0,2673,4474,6200,9111,13181,16377,17783,
#Partially deleted in new
chr13	48134357	48134534	chr13:48134357-48134534	7	-	48134357	48134357	16724991	1	177,	0,
#Partially deleted in new
chr13	48232611	48261875	chr13:48232611-48261875	1	+	48253858	48261224	8553170	6	87,129,207,111,151,737,	0,21196,23565,25514,26185,28527,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	48233157	48270357	chr13:48233157-48270357	3	+	48233360	48261224	789624	6	320,129,207,111,151,9219,	0,20650,23019,24968,25639,27981,
#Partially deleted in new
chr13	48233202	48261388	chr13:48233202-48261388	1	+	48233360	48261224	789624	4	275,129,151,250,	0,20605,25594,27936,
#Partially deleted in new
chr13	48233205	48262091	chr13:48233205-48262091	1	+	48233360	48261224	789624	6	272,129,207,111,151,953,	0,20602,22971,24920,25591,27933,
#Partially deleted in new
chr13	48233205	48258878	chr13:48233205-48258878	0	+	48233360	48239246	8553170	6	272,107,129,207,111,82,	0,6020,20602,22971,24920,25591,
#Partially deleted in new
chr13	48233598	48261591	chr13:48233598-48261591	0	+	48233598	48233598	8553170	6	47,129,207,111,151,453,	0,20209,22578,24527,25198,27540,
#Partially deleted in new
chr13	48233600	48261875	chr13:48233600-48261875	0	+	48233600	48233600	8553170	7	53,142,129,207,111,151,737,	0,329,20207,22576,24525,25196,27538,
#Partially deleted in new
chr13	48234013	48261561	chr13:48234013-48261561	0	+	48234013	48234013	8553170	7	58,107,129,207,111,151,423,	0,5212,19794,22163,24112,24783,27125,
#Partially deleted in new
chr13	48256268	48261556	chr13:48256268-48261556	0	+	48256268	48261213	8553170	3	115,12,418,	0,2667,4870,
#Deleted in new
chr13	48261138	48263195	chr13:48261138-48263195	0	+	48261138	48261224	789624	2	183,625,	0,1432,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	48296512	48303661	chr13:48296512-48303661	3	-	48296512	48296512	789624	3	618,154,371,	0,5826,6778,
#Partially deleted in new
chr13	48302446	48303659	chr13:48302446-48303659	0	-	48302446	48302446	8553170	2	46,174,	0,1039,
#Partially deleted in new
chr13	48303725	48481890	chr13:48303725-48481890	3	+	48303912	48480071	0	27	324,127,116,120,39,68,111,143,78,110,78,88,117,57,32,77,197,119,146,146,105,114,164,31,143,50,1893,	0,3554,38873,41354,44099,45230,56291,59089,61168,63768,64801,69679,73192,75868,76327,76439,77521,149267,152478,155962,160005,161272,161479,169634,172975,173629,176272,
#Partially deleted in new
chr13	48303743	48333216	chr13:48303743-48333216	1	+	48303912	48333064	789624	3	306,127,200,	0,3536,29273,
#Partially deleted in new
chr13	48303746	48481728	chr13:48303746-48481728	1	+	48303912	48480037	8553170	27	303,127,116,120,39,68,111,143,78,110,78,88,117,57,32,77,197,119,146,146,105,114,164,31,143,50,1750,	0,3533,38852,41333,44078,45209,56270,59068,61147,63747,64780,69658,73171,75847,76306,76418,77500,149246,152457,155941,159984,161251,161458,169613,172954,173608,176232,
#Partially deleted in new
chr13	48303750	48360737	chr13:48303750-48360737	0	+	48303750	48303750	8553170	7	299,127,116,120,39,68,721,	0,3529,38848,41329,44074,45205,56266,
#Partially deleted in new
chr13	48303774	48362908	chr13:48303774-48362908	0	+	48303912	48360041	789624	3	275,111,94,	0,56242,59040,
#Deleted in new
chr13	48316862	48320475	chr13:48316862-48320475	7	-	48316862	48316862	16724991	1	3613,	0,
#Deleted in new
chr13	48328083	48328564	chr13:48328083-48328564	7	-	48328083	48328083	16724991	1	481,	0,
#Deleted in new
chr13	48340796	48341330	chr13:48340796-48341330	3	-	48340796	48340796	8553170	1	534,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	48381249	48599436	chr13:48381249-48599436	0	+	48381249	48599436	789624	2	194,135,	0,218052,
#Partially deleted in new
chr13	48389570	48415813	chr13:48389570-48415813	0	-	48389570	48389570	8553170	2	242,114,	0,26129,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	48389570	48391531	chr13:48389570-48391531	0	-	48389570	48389570	8553170	2	242,132,	0,1829,
#Partially deleted in new
chr13	48389570	48415816	chr13:48389570-48415816	0	-	48389570	48389570	8553170	3	242,83,117,	0,14610,26129,
#Partially deleted in new
chr13	48389570	48406709	chr13:48389570-48406709	0	-	48389570	48389570	8553170	3	242,83,154,	0,14610,16985,
#Partially deleted in new
chr13	48411047	48415810	chr13:48411047-48415810	1	-	48411388	48412423	789624	2	2064,111,	0,4652,
#Deleted in new
chr13	48411740	48412489	chr13:48411740-48412489	0	-	48411740	48411740	8553170	2	465,69,	0,680,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	48429268	48429554	chr13:48429268-48429554	3	+	48429268	48429268	8553170	1	286,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	48444827	48456307	chr13:48444827-48456307	0	+	48444827	48444827	8553170	3	394,119,104,	0,8165,11376,
#Partially deleted in new
chr13	48476399	48480339	chr13:48476399-48480339	0	+	48476399	48476399	8553170	4	123,143,50,342,	0,301,955,3598,
#Partially deleted in new
chr13	48476446	48480647	chr13:48476446-48480647	0	+	48476446	48476446	8553170	3	397,50,650,	0,908,3551,
#Partially deleted in new
chr13	48488958	48533233	chr13:48488958-48533233	3	-	48490110	48521939	789624	15	1293,131,140,127,191,143,108,159,167,151,156,65,96,99,206,	0,7232,10662,12783,13765,21670,22811,23057,23770,26246,26627,32939,33349,35700,44069,
#Partially deleted in new
chr13	48488969	48533256	chr13:48488969-48533256	1	-	48490110	48522364	789624	14	1282,131,140,127,191,143,108,159,167,151,156,96,99,229,	0,7221,10651,12772,13754,21659,22800,23046,23759,26235,26616,33338,35689,44058,
#Partially deleted in new
chr13	48488969	48533256	chr13:48488969-48533256	1	-	48490110	48511873	789624	10	1282,131,140,127,191,108,107,151,156,229,	0,7221,10651,12772,13754,22800,23046,26235,26616,44058,
#Partially deleted in new
chr13	48488969	48533256	chr13:48488969-48533256	1	-	48490110	48515711	789624	12	1282,131,140,127,191,143,108,159,167,151,156,229,	0,7221,10651,12772,13754,21659,22800,23046,23759,26235,26616,44058,
#Deleted in new
chr13	48489896	48492573	chr13:48489896-48492573	0	-	48489896	48489896	8553170	3	355,64,134,	0,1755,2543,
#Partially deleted in new
chr13	48512131	48533180	chr13:48512131-48533180	0	-	48512131	48512131	8553170	5	43,167,151,156,153,	0,597,3073,3454,20896,
#Partially deleted in new
chr13	48515294	48532752	chr13:48515294-48532752	0	-	48515294	48515294	8553170	6	61,156,65,96,99,92,	0,291,6603,7013,9364,17366,
#Deleted in new
chr13	48532012	48532599	chr13:48532012-48532599	3	-	48532012	48532012	8553170	1	587,	0,
#Partially deleted in new
chr13	48570638	48573317	chr13:48570638-48573317	3	-	48570638	48570638	8553170	2	203,210,	0,2469,
#Deleted in new
chr13	48576973	48578088	chr13:48576973-48578088	3	-	48576973	48576973	789624	2	886,76,	0,1039,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	48653710	48708176	chr13:48653710-48708176	3	+	48706817	48707858	789624	5	307,67,73,101,1360,	0,37501,39727,42815,53106,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	48653728	48706861	chr13:48653728-48706861	0	+	48706817	48706861	789624	6	289,67,73,129,101,45,	0,37483,39709,40942,42797,53088,
#Partially deleted in new
chr13	48653728	48706861	chr13:48653728-48706861	0	+	48706817	48706861	789624	2	289,45,	0,53088,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	48653728	48706861	chr13:48653728-48706861	0	+	48706817	48706861	789624	6	289,90,73,129,101,45,	0,37483,39709,40942,42797,53088,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	48706554	48711226	chr13:48706554-48711226	1	+	48706817	48707858	789624	1	4672,	0,
#Deleted in new
chr13	48771127	48771827	chr13:48771127-48771827	7	+	48771127	48771127	16724991	1	700,	0,
#Deleted in new
chr13	48974966	48976867	chr13:48974966-48976867	3	-	48974966	48974966	8553170	2	1014,87,	0,1814,
#Partially deleted in new
chr13	48975911	49209779	chr13:48975911-49209779	1	+	49006190	49207395	0	26	266,138,76,77,238,270,59,158,60,139,54,125,175,87,139,69,119,106,176,114,150,284,213,167,128,2699,	0,30240,99377,138743,155225,160420,162835,169866,191332,192701,196131,198523,199455,202656,210052,211210,212603,215103,215297,220965,221813,222070,222450,225888,227245,231169,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	48976068	49146847	chr13:48976068-49146847	1	+	49006190	49145939	789624	8	109,138,76,77,238,270,59,1070,	0,30083,99220,138586,155068,160263,162678,169709,
#Partially deleted in new
chr13	48976608	49209778	chr13:48976608-49209778	1	+	49006190	49207395	0	26	309,138,76,77,238,270,59,158,60,139,54,125,175,87,139,69,119,106,176,114,150,284,213,167,128,2698,	0,29543,98680,138046,154528,159723,162138,169169,190635,192004,195434,197826,198758,201959,209355,210513,211906,214406,214600,220268,221116,221373,221753,225191,226548,230472,
#Partially deleted in new
chr13	48976672	49209607	chr13:48976672-49209607	0	+	49006190	49191224	789624	26	245,138,76,77,238,270,59,158,60,139,54,125,175,87,139,69,119,95,176,114,150,284,213,167,128,2527,	0,29479,98616,137982,154464,159659,162074,169105,190571,191940,195370,197762,198694,201895,209291,210449,211842,214342,214536,220204,221052,221309,221689,225127,226484,230408,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	48987914	48988017	chr13:48987914-48988017	3	+	48987914	48987914	8553170	1	103,	0,
#Partially deleted in new
chr13	49044078	49046794	chr13:49044078-49046794	7	-	49044078	49044078	16724991	3	304,334,1339,	0,606,1377,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	49095390	49095492	chr13:49095390-49095492	3	+	49095390	49095390	8553170	1	102,	0,
#Partially deleted in new
chr13	49110312	49209593	chr13:49110312-49209593	3	+	49110399	49207395	0	24	94,77,238,270,59,158,60,139,54,125,175,87,139,69,119,106,176,114,150,284,213,167,128,2513,	0,4342,20824,26019,28434,35465,56931,58300,61730,64122,65054,68255,75651,76809,78202,80702,80896,86564,87412,87669,88049,91487,92844,96768,
#Deleted in new
chr13	49187478	49187670	chr13:49187478-49187670	7	-	49187478	49187478	16724991	1	192,	0,
#Partially deleted in new
chr13	49198209	49203205	chr13:49198209-49203205	0	+	49198209	49201853	789624	5	56,213,97,167,49,	0,152,2923,3590,4947,
#Partially deleted in new
chr13	49210421	49212294	chr13:49210421-49212294	7	-	49210421	49210421	16724991	2	643,949,	0,924,
#Deleted in new
chr13	49220337	49222377	chr13:49220337-49222377	3	+	49220337	49222377	789624	2	901,338,	0,1702,
#Partially deleted in new
chr13	49232873	49234399	chr13:49232873-49234399	7	+	49232873	49232873	16724991	2	471,773,	0,753,
#Partially deleted in new
chr13	49247924	49293485	chr13:49247924-49293485	3	+	49248037	49291757	789624	10	195,95,75,178,570,50,170,190,61,1802,	0,946,7914,11421,19565,26366,30425,32584,38297,43759,
#Partially deleted in new
chr13	49247935	49255915	chr13:49247935-49255915	0	+	49247935	49247935	8553170	3	534,95,77,	0,935,7903,
#Partially deleted in new
chr13	49247940	49267525	chr13:49247940-49267525	0	+	49248037	49265910	789624	6	179,95,75,178,125,36,	0,930,7898,11405,17938,19549,
#Partially deleted in new
chr13	49247946	49267785	chr13:49247946-49267785	0	+	49247946	49247946	8553170	5	173,95,75,38,296,	0,924,7892,11539,19543,
#Partially deleted in new
chr13	49247976	49267657	chr13:49247976-49267657	0	+	49248037	49265897	789624	6	143,95,75,38,125,168,	0,894,7862,11509,17902,19513,
#Partially deleted in new
chr13	49248047	49265926	chr13:49248047-49265926	0	+	49248047	49265926	789624	4	72,95,75,48,	0,823,7791,17831,
#Partially deleted in new
chr13	49308649	49401599	chr13:49308649-49401599	1	-	49310813	49382910	0	9	2344,144,66,60,169,119,165,142,467,	0,23297,31027,35529,42094,51064,68317,74150,92483,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr13	49308654	49413751	chr13:49308654-49413751	1	-	49310813	49382910	0	10	2339,144,66,60,169,119,165,142,129,28,	0,23292,31022,35524,42089,51059,68312,74145,104257,105069,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr13	49308654	49413751	chr13:49308654-49413751	1	-	49310813	49382910	0	12	2339,144,66,60,169,119,165,142,138,193,129,28,	0,23292,31022,35524,42089,51059,68312,74145,92478,92740,104257,105069,
#Partially deleted in new
chr13	49309797	49444126	chr13:49309797-49444126	3	-	49310813	49382910	0	11	1196,144,66,60,169,119,165,142,76,138,141,	0,22149,29879,34381,40946,49916,67169,73002,123520,124288,134188,
#Partially deleted in new
chr13	49310128	49351127	chr13:49310128-49351127	1	-	49310813	49350875	789624	6	865,144,66,60,169,107,	0,21818,29548,34050,40615,40892,
#Partially deleted in new
chr13	49310621	49377131	chr13:49310621-49377131	0	-	49310813	49377131	789624	6	372,144,66,169,119,165,	0,21325,29055,40122,49092,66345,
#Partially deleted in new
chr13	49310651	49444053	chr13:49310651-49444053	1	-	49310813	49382910	0	12	342,144,66,60,169,119,165,142,138,76,138,68,	0,21295,29025,33527,40092,49062,66315,72148,90481,122666,123434,133334,
#Partially deleted in new
chr13	49350742	49401525	chr13:49350742-49401525	0	-	49350742	49382910	789624	5	170,119,165,142,131,	0,8971,26224,32057,50652,
#Partially deleted in new
chr13	49359723	49420475	chr13:49359723-49420475	0	-	49359723	49382910	789624	5	109,165,142,67,150,	0,17243,23076,33289,60602,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	49376962	49413751	chr13:49376962-49413751	0	-	49376962	49382910	789624	4	169,142,129,28,	0,5837,35949,36761,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	49382506	49413040	chr13:49382506-49413040	0	-	49382506	49382506	8553170	4	435,138,193,129,	0,18626,18888,30405,
#Partially deleted in new
chr13	49401495	49444064	chr13:49401495-49444064	0	-	49401495	49401495	8553170	5	92,196,76,138,79,	0,12508,31822,32590,42490,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr13	49444373	49495003	chr13:49444373-49495003	3	+	49451893	49491849	0	15	484,357,126,66,36,97,564,117,170,226,100,94,341,89,3272,	0,7179,15733,16723,19647,23490,32102,35845,36573,38363,39090,41256,43916,46448,47358,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	49444683	49445952	chr13:49444683-49445952	0	+	49444683	49444683	8553170	2	174,400,	0,869,
#Partially deleted in new
chr13	49444758	49485845	chr13:49444758-49485845	1	+	49451893	49485794	789624	11	99,357,126,66,97,564,117,170,226,100,216,	0,6794,15348,16338,23105,31717,35460,36188,37978,38705,40871,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr13	49451551	49495002	chr13:49451551-49495002	1	+	49451893	49491849	0	13	358,126,66,97,564,117,170,226,100,94,341,89,3271,	0,8555,9545,16312,24924,28667,29395,31185,31912,34078,36738,39270,40180,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr13	49459907	49495002	chr13:49459907-49495002	1	+	49459907	49491849	789624	15	9,7,126,66,36,97,564,117,170,226,100,94,341,89,3271,	0,109,199,1189,4113,7956,16568,20311,21039,22829,23556,25722,28382,30914,31824,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	49488969	49489364	chr13:49488969-49489364	7	+	49488969	49488969	16724991	2	101,118,	0,277,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	49495609	49521033	chr13:49495609-49521033	0	+	49495609	49495609	8553170	5	486,122,108,134,140,	0,11025,17449,22408,25284,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	49495664	49518060	chr13:49495664-49518060	0	+	49495664	49495664	8553170	3	431,108,43,	0,17394,22353,
#Partially deleted in new
chr13	49495960	49528987	chr13:49495960-49528987	3	+	49496001	49528665	789624	10	135,122,108,134,47,65,67,132,72,477,	0,10674,17098,22057,24933,26082,27214,28124,30426,32550,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	49495969	49518834	chr13:49495969-49518834	1	+	49496001	49518173	789624	4	126,122,108,817,	0,10665,17089,22048,
#Partially deleted in new
chr13	49495983	49522060	chr13:49495983-49522060	0	+	49495983	49495983	8553170	7	112,162,122,108,134,47,18,	0,1072,10651,17075,22034,24910,26059,
#Partially deleted in new
chr13	49496012	49522088	chr13:49496012-49522088	0	+	49496012	49496012	8553170	6	83,108,134,47,363,46,	0,17046,22005,24881,25125,26030,
#Partially deleted in new
chr13	49496015	49528708	chr13:49496015-49528708	0	+	49496015	49528665	789624	9	80,108,134,47,65,67,132,72,198,	0,17043,22002,24878,26027,27159,28069,30371,32495,
#Partially deleted in new
chr13	49496235	49518151	chr13:49496235-49518151	0	+	49496235	49496235	8553170	4	213,162,108,134,	0,820,16823,21782,
#Partially deleted in new
chr13	49496354	49523207	chr13:49496354-49523207	0	+	49497205	49523207	789624	7	246,162,108,134,47,65,33,	0,701,16704,21663,24539,25688,26820,
#Partially deleted in new
chr13	49496391	49528981	chr13:49496391-49528981	1	+	49506657	49528665	789624	11	91,162,122,108,134,47,65,67,132,72,471,	0,664,10243,16667,21626,24502,25651,26783,27693,29995,32119,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr13	49496396	49528976	chr13:49496396-49528976	0	+	49506657	49525801	789624	12	86,162,122,108,134,47,65,67,132,165,72,466,	0,659,10238,16662,21621,24497,25646,26778,27688,29376,29990,32114,
#Partially deleted in new
chr13	49496396	49518105	chr13:49496396-49518105	0	+	49506657	49518105	789624	5	86,162,122,108,88,	0,659,10238,16662,21621,
#Partially deleted in new
chr13	49496399	49523225	chr13:49496399-49523225	0	+	49506657	49523225	789624	7	83,122,108,134,47,65,51,	0,10235,16659,21618,24494,25643,26775,
#Partially deleted in new
chr13	49497112	49528976	chr13:49497112-49528976	1	+	49506657	49528665	789624	10	105,122,108,134,47,65,67,132,72,466,	0,9522,15946,20905,23781,24930,26062,26972,29274,31398,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	49521928	49528536	chr13:49521928-49528536	0	+	49521928	49521928	8553170	6	179,67,132,165,72,26,	0,1246,2156,3844,4458,6582,
#Partially deleted in new
chr13	49521936	49524080	chr13:49521936-49524080	0	+	49521936	49521936	8553170	2	171,906,	0,1238,
#Partially deleted in new
chr13	49521955	49527354	chr13:49521955-49527354	0	+	49521955	49521955	8553170	5	152,67,132,72,149,	0,1219,2129,4431,5250,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	49526188	49528976	chr13:49526188-49528976	0	+	49526188	49526188	8553170	2	270,466,	0,2322,
#Partially deleted in new
chr13	49531945	49567323	chr13:49531945-49567323	1	-	49534121	49567279	789624	11	2317,131,152,127,191,143,108,159,167,151,170,	0,8930,9730,12791,17512,19380,20232,23569,27972,34672,35208,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr13	49531945	49585583	chr13:49531945-49585583	3	-	49534121	49567279	789624	13	2317,131,152,127,191,143,108,159,167,151,167,80,140,	0,8930,9730,12791,17512,19380,20232,23569,27972,34672,35208,48559,53498,
#Partially deleted in new
chr13	49533917	49539503	chr13:49533917-49539503	0	-	49533917	49533917	8553170	3	345,214,129,	0,3952,5457,
#Partially deleted in new
chr13	49551170	49552252	chr13:49551170-49552252	0	-	49551170	49551170	8553170	2	298,75,	0,1007,
#Partially deleted in new
chr13	49620313	49620646	chr13:49620313-49620646	7	+	49620313	49620313	16724991	1	333,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	49628298	49633872	chr13:49628298-49633872	3	+	49630447	49631038	789624	2	317,3443,	0,2131,
#Partially deleted in new
chr13	49628522	49632237	chr13:49628522-49632237	0	+	49628522	49628522	8553170	3	93,66,58,	0,1511,3657,
#Partially deleted in new
chr13	49660722	49691463	chr13:49660722-49691463	1	-	49661155	49691424	789624	3	486,70,210,	0,9054,30531,
#Partially deleted in new
chr13	49660722	49691463	chr13:49660722-49691463	1	-	49661902	49691424	789624	5	486,62,139,70,210,	0,1143,2334,9054,30531,
#Partially deleted in new
chr13	49660722	49691438	chr13:49660722-49691438	0	-	49660722	49660722	789624	3	486,139,185,	0,2334,30531,
#Partially deleted in new
chr13	49660722	49691463	chr13:49660722-49691463	0	-	49660722	49660722	789624	5	486,139,70,121,210,	0,2334,9054,25752,30531,
#Partially deleted in new
chr13	49660725	49691475	chr13:49660725-49691475	3	-	49660967	49691424	789624	4	483,139,70,222,	0,2331,9051,30528,
#Partially deleted in new
chr13	49660833	49691457	chr13:49660833-49691457	1	-	49661070	49691424	789624	2	375,204,	0,30420,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	49668169	49691463	chr13:49668169-49691463	1	-	49668351	49691424	789624	3	400,70,210,	0,1607,23084,
#Partially deleted in new
chr13	49699306	49792921	chr13:49699306-49792921	3	-	49701799	49792506	789624	17	2592,95,163,72,105,129,132,45,170,87,86,96,53,30,90,45,484,	0,3079,6314,6791,6961,10265,11584,20468,22648,23170,26109,33064,33298,33440,33650,47642,93131,
#Partially deleted in new
chr13	49701209	49705752	chr13:49701209-49705752	0	-	49701522	49705752	789624	4	318,43,95,132,	0,646,1176,4411,
#Deleted in new
chr13	49792885	49793307	chr13:49792885-49793307	3	+	49792885	49792885	8553170	1	422,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	49889633	49889728	chr13:49889633-49889728	3	-	49889633	49889633	8553170	1	95,	0,
#Deleted in new
chr13	49890590	49892998	chr13:49890590-49892998	7	+	49890590	49890590	16724991	1	2408,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	49908633	49908730	chr13:49908633-49908730	3	-	49908633	49908633	8553170	1	97,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	49912705	49936340	chr13:49912705-49936340	3	-	49915062	49936235	789624	5	2455,103,167,117,211,	0,8772,15213,18312,23424,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	49912705	49936490	chr13:49912705-49936490	1	-	49915062	49936235	789624	4	2455,103,167,361,	0,8772,15213,23424,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	49912709	49936307	chr13:49912709-49936307	1	-	49915062	49936235	789624	5	469,1368,103,167,178,	0,1083,8768,15209,23420,
#Partially deleted in new
chr13	49931017	49935753	chr13:49931017-49935753	0	-	49931017	49931017	8553170	2	117,137,	0,4599,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr13	49982551	50125541	chr13:49982551-50125541	3	-	49982551	49982551	789624	14	1203,36,169,346,200,215,129,115,79,67,60,114,95,240,	0,6034,11241,14522,44655,46726,62088,62566,67032,85545,88030,88964,93007,142750,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	49995887	50012327	chr13:49995887-50012327	0	+	50011940	50012327	789624	4	88,97,114,393,	0,1779,5107,16047,
#Deleted in new
chr13	49996414	49996501	chr13:49996414-49996501	3	-	49996414	49996414	5263520	1	87,	0,
#Partially deleted in new
chr13	49996502	50012740	chr13:49996502-50012740	0	+	50011940	50012740	789624	3	348,97,806,	0,1164,15432,
#Partially deleted in new
chr13	49996812	50020481	chr13:49996812-50020481	0	+	49996812	49996812	8553170	3	38,97,268,	0,854,23401,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	49997018	50014331	chr13:49997018-50014331	1	+	50011940	50013164	789624	3	113,97,2397,	0,648,14916,
#Partially deleted in new
chr13	49997018	50020481	chr13:49997018-50020481	0	+	49997018	49997018	8553170	3	113,97,268,	0,648,23195,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	49997031	50018451	chr13:49997031-50018451	3	+	50011940	50013164	789624	2	732,6517,	0,14903,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	49997036	50013180	chr13:49997036-50013180	1	+	50001105	50013164	789624	4	180,97,114,1246,	0,630,3958,14898,
#Partially deleted in new
chr13	49997058	50013168	chr13:49997058-50013168	1	+	50011940	50013164	789624	3	158,97,1234,	0,608,14876,
#Partially deleted in new
chr13	50015253	50020922	chr13:50015253-50020922	3	+	50015493	50020454	789624	2	818,709,	0,4960,
#Partially deleted in new
chr13	50027132	50125720	chr13:50027132-50125720	1	-	50027132	50027132	8553170	7	274,215,118,79,67,95,419,	0,2145,17518,22451,40964,48426,98169,
#Partially deleted in new
chr13	50043436	50081978	chr13:50043436-50081978	1	-	50043436	50043436	789624	7	1313,18,80,31,46,95,156,	0,1314,6147,24647,24681,32122,38386,
#Partially deleted in new
chr13	50043508	50081978	chr13:50043508-50081978	0	-	50043508	50043508	8553170	5	1260,79,67,95,156,	0,6075,24588,32050,38314,
#Partially deleted in new
chr13	50044386	50081992	chr13:50044386-50081992	0	-	50044386	50044386	8553170	4	382,79,67,170,	0,5197,23710,37436,
#Partially deleted in new
chr13	50044514	50081972	chr13:50044514-50081972	1	-	50044514	50044514	8553170	6	254,79,67,60,95,150,	0,5069,23582,26067,31044,37308,
#Partially deleted in new
chr13	50044648	50044768	chr13:50044648-50044768	3	+	50044648	50044648	8553170	1	120,	0,
#Partially deleted in new
chr13	50045142	50045232	chr13:50045142-50045232	3	+	50045142	50045142	8553170	1	90,	0,
#Deleted in new
chr13	50048972	50049061	chr13:50048972-50049061	3	-	50048972	50048972	5263520	1	89,	0,
#Deleted in new
chr13	50049118	50049201	chr13:50049118-50049201	3	-	50049118	50049118	5263520	1	83,	0,
#Partially deleted in new
chr13	50049188	50081973	chr13:50049188-50081973	0	-	50049188	50049188	8553170	3	474,67,151,	0,18908,32634,
#Partially deleted in new
chr13	50049189	50081978	chr13:50049189-50081978	0	-	50049189	50049189	789624	4	473,67,95,156,	0,18907,26369,32633,
#Deleted in new
chr13	50049590	50049663	chr13:50049590-50049663	3	+	50049590	50049590	8553170	1	73,	0,
#Deleted in new
chr13	50068106	50068164	chr13:50068106-50068164	3	+	50068106	50068106	8553170	1	58,	0,
#Deleted in new
chr13	50075569	50075653	chr13:50075569-50075653	3	+	50075569	50075569	8553170	1	84,	0,
#Deleted in new
chr13	50081842	50081978	chr13:50081842-50081978	3	+	50081842	50081842	8553170	1	136,	0,
#Partially deleted in new
chr13	50082170	50105297	chr13:50082170-50105297	1	+	50082170	50082170	8553170	2	387,594,	0,22533,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	50082170	50107218	chr13:50082170-50107218	1	+	50082170	50082170	789624	3	387,53,2515,	0,971,22533,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	50082170	50083971	chr13:50082170-50083971	1	+	50082170	50082170	8553170	3	387,53,162,	0,971,1639,
#Partially deleted in new
chr13	50082170	50390291	chr13:50082170-50390291	1	+	50082170	50082170	8553170	2	387,94,	0,308027,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	50082170	50528534	chr13:50082170-50528534	1	+	50082170	50082170	8553170	6	387,1250,138,111,199,355,	0,74656,351242,410480,445695,446009,
#Deleted in new
chr13	50082294	50082484	chr13:50082294-50082484	3	+	50082294	50082294	8553170	1	190,	0,
#Deleted in new
chr13	50099330	50099868	chr13:50099330-50099868	7	+	50099330	50099330	16724991	1	538,	0,
#Partially deleted in new
chr13	50104832	50105174	chr13:50104832-50105174	3	+	50104832	50104832	8553170	1	342,	0,
#Deleted in new
chr13	50125815	50128463	chr13:50125815-50128463	3	+	50125815	50125815	8553170	1	2648,	0,
#Deleted in new
chr13	50172088	50173181	chr13:50172088-50173181	7	+	50172088	50172088	16724991	1	1093,	0,
#Partially deleted in new
chr13	50224280	50401366	chr13:50224280-50401366	0	+	50224280	50224280	8553170	3	97,94,141,	0,165917,176945,
#Partially deleted in new
chr13	50293421	50415202	chr13:50293421-50415202	0	+	50293421	50293421	8553170	3	112,94,114,	0,96776,121667,
#Partially deleted in new
chr13	50310161	50390291	chr13:50310161-50390291	0	+	50310161	50310161	8553170	2	180,94,	0,80036,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	50329633	50401366	chr13:50329633-50401366	0	+	50329633	50329633	8553170	4	79,466,94,141,	0,59453,60564,71592,
#Deleted in new
chr13	50361409	50361763	chr13:50361409-50361763	7	-	50361409	50361409	16724991	1	354,	0,
#Partially deleted in new
chr13	50390197	50528064	chr13:50390197-50528064	0	+	50390197	50390197	8553170	4	94,114,111,199,	0,24891,102453,137668,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	50397418	50654079	chr13:50397418-50654079	1	+	50397418	50397418	8553170	6	478,114,152,138,51,369,	0,17670,28159,35994,251174,256292,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	50397443	50415202	chr13:50397443-50415202	0	+	50397443	50397443	8553170	2	453,113,	0,17646,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	50401225	50409122	chr13:50401225-50409122	0	+	50401225	50401225	8553170	3	141,94,1069,	0,3205,6828,
#Partially deleted in new
chr13	50415088	50528534	chr13:50415088-50528534	0	+	50415088	50415088	8553170	3	114,199,355,	0,112777,113091,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	50415088	50475566	chr13:50415088-50475566	0	+	50415088	50415088	8553170	3	114,138,387,	0,18324,60091,
#Partially deleted in new
chr13	50492643	50512893	chr13:50492643-50512893	0	+	50492643	50492643	8553170	2	118,282,	0,19968,
#Partially deleted in new
chr13	50520932	50527449	chr13:50520932-50527449	3	-	50520932	50520932	789624	3	504,56,171,	0,5019,6346,
#Partially deleted in new
chr13	50711007	50715483	chr13:50711007-50715483	0	-	50711007	50711007	8553170	2	2233,58,	0,4418,
#Partially deleted in new
chr13	50711900	50843939	chr13:50711900-50843939	1	-	50713216	50843646	789624	2	1340,752,	0,131287,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	50807855	50849905	chr13:50807855-50849905	3	+	50807855	50807855	789624	5	131,167,72,67,1369,	0,684,10665,32172,40681,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	50812987	50813106	chr13:50812987-50813106	7	-	50812987	50812987	16724991	1	119,	0,
#Partially deleted in new
chr13	50822907	50843696	chr13:50822907-50843696	3	-	50823313	50843646	789624	2	613,509,	0,20280,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	50862171	50891474	chr13:50862171-50891474	1	-	50862171	50862171	8553170	6	1011,106,157,135,127,171,	0,2880,4033,20339,27437,29132,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	50876685	50910594	chr13:50876685-50910594	0	-	50876685	50876685	8553170	5	277,135,127,143,112,	0,5825,12923,28035,33797,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	50879571	50910561	chr13:50879571-50910561	0	-	50879571	50879571	8553170	4	924,135,127,79,	0,2939,10037,30911,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	50882047	50910764	chr13:50882047-50910764	1	-	50882047	50882047	789624	3	598,127,282,	0,7561,28435,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	50882397	50910594	chr13:50882397-50910594	0	-	50882397	50882397	8553170	4	246,127,143,112,	0,7211,22323,28085,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	50882463	50891642	chr13:50882463-50891642	3	-	50882463	50882463	8553170	3	182,127,339,	0,7145,8840,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	50882551	50905156	chr13:50882551-50905156	1	-	50882551	50882551	8553170	3	94,127,436,	0,7057,22169,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	50882608	50910594	chr13:50882608-50910594	0	-	50882608	50882608	8553170	5	37,127,201,143,112,	0,7000,8695,22112,27874,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	50907816	50910562	chr13:50907816-50910562	0	-	50907816	50907816	8553170	2	385,80,	0,2666,
#Partially deleted in new
chr13	50909677	50956765	chr13:50909677-50956765	3	+	50910076	50956474	0	11	463,72,108,77,115,74,106,82,43,81,408,	0,17729,19797,21005,25207,33643,35749,38309,39785,44227,46680,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr13	50909746	50973745	chr13:50909746-50973745	1	+	50910076	50969964	0	10	394,72,108,77,115,74,106,82,43,3814,	0,17660,19728,20936,25138,33574,35680,38240,39716,60185,
#Partially deleted in new
chr13	50909767	50956760	chr13:50909767-50956760	1	+	50910076	50956474	789624	11	373,72,108,77,115,65,106,82,43,81,403,	0,17639,19707,20915,25117,33562,35659,38219,39695,44137,46590,
#Partially deleted in new
chr13	50909767	50970457	chr13:50909767-50970457	1	+	50910076	50969964	789624	10	373,72,108,77,115,65,106,82,43,526,	0,17639,19707,20915,25117,33562,35659,38219,39695,60164,
#Partially deleted in new
chr13	50909779	50956737	chr13:50909779-50956737	1	+	50915447	50956474	789624	13	361,137,201,72,108,77,115,74,106,82,43,81,380,	0,3215,5495,17627,19695,20903,25105,33541,35647,38207,39683,44125,46578,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr13	50909779	50956314	chr13:50909779-50956314	0	+	50909779	50909779	8553170	10	361,72,108,77,115,74,106,82,43,6244,	0,17627,19695,20903,25105,33541,35647,38207,39683,40291,
#Partially deleted in new
chr13	50909780	50970433	chr13:50909780-50970433	1	+	50910076	50970086	789624	13	360,72,108,77,115,74,106,82,43,81,64,27,502,	0,17626,19694,20902,25104,33540,35646,38206,39682,44124,46577,50364,60151,
#Partially deleted in new
chr13	50909790	50934920	chr13:50909790-50934920	0	+	50927432	50934920	789624	6	350,137,72,108,77,36,	0,3204,17616,19684,20892,25094,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	50909812	50939180	chr13:50909812-50939180	0	+	50909812	50909812	8553170	5	328,72,108,77,4296,	0,17594,19662,20870,25072,
#Partially deleted in new
chr13	50909879	50956761	chr13:50909879-50956761	0	+	50910076	50929471	789624	11	261,72,122,77,115,65,106,82,43,81,404,	0,17527,19581,20803,25005,33450,35547,38107,39583,44025,46478,
#Partially deleted in new
chr13	50909912	50956544	chr13:50909912-50956544	1	+	50910076	50956474	789624	5	228,82,43,81,187,	0,38074,39550,43992,46445,
#Partially deleted in new
chr13	50909917	50998141	chr13:50909917-50998141	1	+	50910076	50997341	789624	11	223,72,108,77,115,74,106,82,43,81,848,	0,17489,19557,20765,24967,33403,35509,38069,39545,43987,87376,
#Partially deleted in new
chr13	50909991	50970363	chr13:50909991-50970363	1	+	50910076	50969964	789624	12	149,72,108,77,115,74,106,82,43,81,27,432,	0,17415,19483,20691,24893,33329,35435,37995,39471,43913,50153,59940,
#Partially deleted in new
chr13	50909999	50950237	chr13:50909999-50950237	0	+	50910076	50929471	789624	10	141,72,122,77,115,74,106,82,43,212,	0,17407,19461,20683,24885,33321,35427,37987,39463,40026,
#Partially deleted in new
chr13	50910006	50956503	chr13:50910006-50956503	1	+	50910076	50954033	789624	10	134,72,108,77,115,74,106,82,43,2599,	0,17400,19468,20676,24878,33314,35420,37980,39456,43898,
#Partially deleted in new
chr13	50910012	50943352	chr13:50910012-50943352	0	+	50910076	50929523	789624	6	128,72,67,77,115,32,	0,17394,19503,20670,24872,33308,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr13	50910050	50972660	chr13:50910050-50972660	0	+	50910050	50910050	8553170	13	90,72,108,77,115,74,106,82,43,698,330,67,23,	0,17356,19424,20632,24834,33270,35376,37936,39412,49423,59881,60445,62587,
#Partially deleted in new
chr13	50910052	50970462	chr13:50910052-50970462	1	+	50910076	50969964	789624	11	88,72,108,77,115,74,106,82,43,27,531,	0,17354,19422,20630,24832,33268,35374,37934,39410,50092,59879,
#Partially deleted in new
chr13	50910069	50956567	chr13:50910069-50956567	1	+	50910076	50956474	789624	10	71,72,77,115,65,106,82,43,81,210,	0,17337,20613,24815,33260,35357,37917,39393,43835,46288,
#Partially deleted in new
chr13	50910084	50953952	chr13:50910084-50953952	0	+	50915447	50950098	789624	13	56,137,201,72,108,77,115,74,106,82,43,322,48,	0,2910,5190,17322,19390,20598,24800,33236,35342,37902,39378,39912,43820,
#Partially deleted in new
chr13	50910109	50971005	chr13:50910109-50971005	0	+	50910109	50934904	789624	10	31,72,108,115,74,106,82,43,27,1074,	0,17297,19365,24775,33211,35317,37877,39353,50035,59822,
#Partially deleted in new
chr13	50910125	50956502	chr13:50910125-50956502	0	+	50910125	50950109	789624	12	15,72,108,77,115,74,106,82,43,248,81,145,	0,17281,19349,20557,24759,33195,35301,37861,39337,39945,43779,46232,
#Partially deleted in new
chr13	50910138	50927452	chr13:50910138-50927452	0	+	50927432	50927452	789624	2	420,46,	0,17268,
#Partially deleted in new
chr13	50910142	50970413	chr13:50910142-50970413	1	+	50927432	50969964	789624	13	296,137,72,108,77,115,74,106,82,43,81,27,482,	0,2852,17264,19332,20540,24742,33178,35284,37844,39320,43762,50002,59789,
#Partially deleted in new
chr13	50910154	50956572	chr13:50910154-50956572	1	+	50927432	50956474	789624	11	284,72,108,77,115,74,106,82,43,81,215,	0,17252,19320,20528,24730,33166,35272,37832,39308,43750,46203,
#Partially deleted in new
chr13	50910231	50970454	chr13:50910231-50970454	1	+	50927432	50969964	789624	10	207,72,108,77,115,74,106,82,43,523,	0,17175,19243,20451,24653,33089,35195,37755,39231,59700,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr13	50910273	50956744	chr13:50910273-50956744	1	+	50927432	50956474	789624	11	2858,72,108,77,115,74,106,82,43,81,387,	0,17133,19201,20409,24611,33047,35153,37713,39189,43631,46084,
#Partially deleted in new
chr13	50913055	50970429	chr13:50913055-50970429	1	+	50927432	50969964	789624	10	76,72,108,77,115,74,106,82,43,498,	0,14351,16419,17627,21829,30265,32371,34931,36407,56876,
#Partially deleted in new
chr13	50927154	50956765	chr13:50927154-50956765	0	+	50927154	50927154	8553170	11	97,72,108,77,115,65,106,82,43,81,408,	0,252,2320,3528,7730,16175,18272,20832,22308,26750,29203,
#Partially deleted in new
chr13	50927410	50956405	chr13:50927410-50956405	0	+	50927410	50927410	8553170	9	68,108,77,115,74,106,1519,81,48,	0,2064,3272,7474,15910,18016,20576,26494,28947,
#Partially deleted in new
chr13	50927472	50970401	chr13:50927472-50970401	0	+	50927472	50969932	789624	11	6,108,77,115,74,106,82,43,81,23,470,	0,2002,3210,7412,15848,17954,20514,21990,26432,32676,42459,
#Partially deleted in new
chr13	50928361	50956501	chr13:50928361-50956501	0	+	50928361	50928361	8553170	10	147,108,77,115,74,106,82,43,81,144,	0,1113,2321,6523,14959,17065,19625,21101,25543,27996,
#Partially deleted in new
chr13	50929484	50956503	chr13:50929484-50956503	0	+	50929484	50943335	789624	8	98,77,74,106,82,43,81,146,	0,1198,13836,15942,18502,19978,24420,26873,
#Partially deleted in new
chr13	50929503	50970413	chr13:50929503-50970413	0	+	50929503	50969964	789624	9	79,77,115,74,106,82,43,81,482,	0,1179,5381,13817,15923,18483,19959,24401,40428,
#Partially deleted in new
chr13	50930113	50956501	chr13:50930113-50956501	0	+	50930113	50930113	8553170	8	42,77,74,106,82,43,81,144,	0,569,13207,15313,17873,19349,23791,26244,
#Partially deleted in new
chr13	50930750	50956503	chr13:50930750-50956503	0	+	50930750	50943324	789624	7	98,74,106,82,43,81,146,	0,12570,14676,17236,18712,23154,25607,
#Partially deleted in new
chr13	50933924	50970357	chr13:50933924-50970357	0	+	50933924	50933924	8553170	6	1075,74,106,82,43,426,	0,9396,11502,14062,15538,36007,
#Partially deleted in new
chr13	50934915	50956460	chr13:50934915-50956460	0	+	50934915	50956460	789624	6	84,74,106,82,43,103,	0,8405,10511,13071,14547,21442,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	50940822	50970456	chr13:50940822-50970456	0	+	50940822	50940822	8553170	5	2572,106,82,43,525,	0,4604,7164,8640,29109,
#Partially deleted in new
chr13	50943296	50953984	chr13:50943296-50953984	0	+	50943296	50943296	8553170	5	98,106,82,43,80,	0,2130,4690,6166,10608,
#Partially deleted in new
chr13	50943371	51024120	chr13:50943371-51024120	0	+	50943371	50993683	789624	6	23,106,82,43,84,170,	0,2055,4615,6091,50252,80579,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	50945519	50951902	chr13:50945519-50951902	0	+	50945519	50945519	8553170	4	13,82,43,1877,	0,2467,3943,4506,
#Partially deleted in new
chr13	50948032	50970433	chr13:50948032-50970433	0	+	50948032	50969964	789624	5	36,43,81,84,502,	0,1430,5872,8325,21899,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	50948063	50951943	chr13:50948063-50951943	0	+	50948063	50948063	8553170	3	5,43,1904,	0,1399,1976,
#Partially deleted in new
chr13	50994510	51066006	chr13:50994510-51066006	7	-	50994510	50994510	16724991	17	301,324,210,152,155,147,149,321,217,104,112,197,100,157,95,74,56,	0,9742,12189,12479,15562,21670,22405,25887,29589,30823,32191,33697,35083,39492,53709,68310,71440,
#Deleted in new
chr13	51004252	51007860	chr13:51004252-51007860	4	-	51004252	51004252	16724991	4	102,210,152,67,	0,2447,2737,3541,
#Partially deleted in new
chr13	51006990	51062894	chr13:51006990-51062894	5	-	51006990	51006990	16724991	13	151,155,147,149,321,217,104,112,197,100,157,95,74,	0,3082,9190,9925,13407,17109,18343,19711,21217,22603,27012,41229,55830,
#Partially deleted in new
chr13	51015415	51066207	chr13:51015415-51066207	4	-	51015415	51015415	16724991	10	912,149,321,217,104,112,100,95,74,257,	0,1500,4982,8684,9918,11286,14178,32804,47405,50535,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr13	51016107	51080862	chr13:51016107-51080862	5	-	51016107	51016107	16724991	12	220,149,321,217,104,112,100,157,95,74,207,156,	0,808,4290,7992,9226,10594,13486,17895,32112,46713,49843,64599,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	51027746	51027852	chr13:51027746-51027852	7	-	51027746	51027746	16724991	1	106,	0,
#Partially deleted in new
chr13	51082118	51111209	chr13:51082118-51111209	3	-	51084150	51111209	789624	4	2207,241,148,414,	0,3200,5809,28677,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	51083208	51200252	chr13:51083208-51200252	0	-	51083208	51083208	8553170	5	1117,241,148,30,206,	0,2110,4719,29984,116838,
#Duplicated in new
chr13	51084123	51172222	chr13:51084123-51172222	0	-	51084123	51084123	789624	4	202,241,148,235,	0,1195,3804,87864,
#Deleted in new
chr13	51161722	51162357	chr13:51161722-51162357	7	-	51161722	51161722	16724991	1	635,	0,
#Deleted in new
chr13	51180177	51180967	chr13:51180177-51180967	3	+	51180177	51180177	8553170	1	790,	0,
#Deleted in new
chr13	51195880	51196081	chr13:51195880-51196081	7	+	51195880	51195880	16724991	1	201,	0,
#Partially deleted in new
chr13	51222333	51253582	chr13:51222333-51253582	1	+	51222501	51252273	789624	3	236,32,2115,	0,9014,29134,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	51222366	51284241	chr13:51222366-51284241	1	+	51222501	51281256	789624	4	203,32,734,3792,	0,8981,29101,58083,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	51222376	51227429	chr13:51222376-51227429	0	+	51222376	51222376	8553170	3	193,236,183,	0,2744,4870,
#Partially deleted in new
chr13	51335772	51364735	chr13:51335772-51364735	1	+	51341091	51364282	789624	11	97,433,78,273,234,210,199,101,87,84,497,	0,3538,5011,5302,8479,11252,12440,19270,25505,26037,28466,
#Deleted in new
chr13	51339689	51341234	chr13:51339689-51341234	0	+	51341091	51341234	789624	3	54,142,160,	0,1094,1385,
#Partially deleted in new
chr13	51341031	51362101	chr13:51341031-51362101	3	+	51341091	51361997	789624	7	316,234,210,199,101,87,292,	0,3220,5993,7181,14011,20246,20778,
#Partially deleted in new
chr13	51341088	51364282	chr13:51341088-51364282	1	+	51341091	51364282	789624	8	259,234,210,199,101,87,84,44,	0,3163,5936,7124,13954,20189,20721,23150,
#Deleted in new
chr13	51348566	51348639	chr13:51348566-51348639	3	-	51348566	51348566	5263520	1	73,	0,
#Partially deleted in new
chr13	51354076	51369131	chr13:51354076-51369131	0	-	51354076	51354076	8553170	4	260,143,94,193,	0,11626,13728,14862,
#Partially deleted in new
chr13	51361564	51453207	chr13:51361564-51453207	1	-	51365751	51452486	789624	19	4281,94,372,232,143,127,216,111,95,133,153,155,126,184,90,150,78,86,215,	0,6240,7374,12643,13089,14483,16674,17897,20464,21764,22024,25821,27754,33735,68729,89460,90413,90850,91428,
#Partially deleted in new
chr13	51365198	51452791	chr13:51365198-51452791	0	-	51423063	51452525	789624	20	647,94,372,232,143,127,216,111,95,133,153,155,126,184,223,61,90,150,78,377,	0,2606,3740,9009,9455,10849,13040,14263,16830,18130,18390,22187,24120,30101,55913,57831,65095,85826,86779,87216,
#Partially deleted in new
chr13	51365226	51452998	chr13:51365226-51452998	3	-	51365751	51452525	789624	18	619,94,372,232,143,127,216,111,95,133,153,155,126,184,90,150,78,584,	0,2578,3712,8981,9427,10821,13012,14235,16802,18102,18362,22159,24092,30073,65067,85798,86751,87188,
#Partially deleted in new
chr13	51365227	51421374	chr13:51365227-51421374	1	-	51365751	51395378	789624	15	618,94,372,232,143,127,216,111,95,133,153,155,126,184,263,	0,2577,3711,8980,9426,10820,13011,14234,16801,18101,18361,22158,24091,30072,55884,
#Partially deleted in new
chr13	51365502	51384691	chr13:51365502-51384691	0	-	51365502	51365502	8553170	11	343,94,372,232,143,127,216,111,95,133,1103,	0,2302,3436,8705,9151,10545,12736,13959,16526,17826,18086,
#Partially deleted in new
chr13	51365735	51385264	chr13:51365735-51385264	1	-	51365751	51383687	789624	12	110,94,372,232,143,127,216,111,95,133,153,521,	0,2069,3203,8472,8918,10312,12503,13726,16293,17593,17853,19008,
#Partially deleted in new
chr13	51379508	51383741	chr13:51379508-51383741	0	-	51379508	51379508	8553170	3	64,95,413,	0,2520,3820,
#Partially deleted in new
chr13	51379541	51384707	chr13:51379541-51384707	0	-	51379541	51384687	789624	5	31,95,133,153,71,	0,2487,3787,4047,5095,
#Partially deleted in new
chr13	51382028	51384695	chr13:51382028-51384695	0	-	51382028	51382028	8553170	4	95,133,153,323,	0,1300,1560,2344,
#Partially deleted in new
chr13	51387385	51452332	chr13:51387385-51452332	0	-	51387385	51387385	8553170	5	155,90,150,78,82,	0,42908,63639,64592,64865,
#Partially deleted in new
chr13	51395298	51451567	chr13:51395298-51451567	0	-	51395298	51451144	789624	4	185,90,150,71,	0,34995,55726,56198,
#Partially deleted in new
chr13	51402528	51423090	chr13:51402528-51423090	0	-	51402528	51402528	8553170	3	275,223,61,	0,18583,20501,
#Partially deleted in new
chr13	51421175	51452650	chr13:51421175-51452650	0	-	51421175	51421175	8553170	5	159,90,150,78,236,	0,9118,29849,30802,31239,
#Partially deleted in new
chr13	51423002	51452251	chr13:51423002-51452251	0	-	51423002	51423002	8553170	4	88,90,150,274,	0,7291,28022,28975,
#Partially deleted in new
chr13	51423029	51451567	chr13:51423029-51451567	0	-	51423029	51423029	8553170	4	61,90,150,259,	0,7264,27995,28279,
#Partially deleted in new
chr13	51430234	51451574	chr13:51430234-51451574	0	-	51430234	51451144	789624	3	149,150,153,	0,20790,21187,
#Partially deleted in new
chr13	51430293	51453592	chr13:51430293-51453592	0	-	51430293	51452486	789624	5	90,150,78,86,70,	0,20731,21684,22121,23229,
#Partially deleted in new
chr13	51430304	51454264	chr13:51430304-51454264	0	-	51430304	51452486	789624	5	79,150,78,86,204,	0,20720,21673,22110,23756,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	51436425	51453015	chr13:51436425-51453015	1	-	51451015	51452525	789624	3	14749,78,601,	0,15552,15989,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	51452366	51549892	chr13:51452366-51549892	0	+	51452366	51452366	8553170	6	87,180,100,56,96,183,	0,1783,15901,26642,54176,97343,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	51452366	51549892	chr13:51452366-51549892	0	+	51452366	51452366	8553170	6	87,180,100,96,112,183,	0,1783,15901,54176,96752,97343,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	51452367	51549892	chr13:51452367-51549892	0	+	51452367	51452367	8553170	6	86,180,147,100,96,183,	0,1782,15170,15900,54175,97342,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	51452369	51549875	chr13:51452369-51549875	0	+	51452369	51452369	8553170	6	84,327,100,56,96,166,	0,1633,15898,26639,54173,97340,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	51452428	51468367	chr13:51452428-51468367	1	+	51452428	51452428	8553170	3	25,176,100,	0,15080,15839,
#Deleted in new
chr13	51453340	51454830	chr13:51453340-51454830	1	+	51453340	51453340	789624	2	78,828,	0,662,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	51453382	51506638	chr13:51453382-51506638	1	+	51453382	51453382	8553170	5	36,327,89,100,96,	0,620,14213,14885,53160,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	51454146	51549992	chr13:51454146-51549992	3	+	51454146	51454146	8553170	2	183,283,	0,95563,
#Partially deleted in new
chr13	51454163	51500501	chr13:51454163-51500501	0	+	51454163	51454163	8553170	3	166,100,397,	0,14104,45941,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	51454163	51468367	chr13:51454163-51468367	0	+	51454163	51454163	8553170	4	166,154,176,100,	0,8102,13345,14104,
#Partially deleted in new
chr13	51454163	51468780	chr13:51454163-51468780	0	+	51454163	51454163	8553170	2	166,513,	0,14104,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	51454163	51469423	chr13:51454163-51469423	0	+	51454163	51454163	8553170	3	166,100,652,	0,14104,14608,
#Partially deleted in new
chr13	51454163	51461312	chr13:51454163-51461312	7	+	51454163	51454163	16724991	2	166,641,	0,6508,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	51454163	51467649	chr13:51454163-51467649	0	+	51454163	51454163	8553170	3	166,154,112,	0,8102,13374,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	51454163	51515956	chr13:51454163-51515956	0	+	51454163	51454163	8553170	4	166,100,96,308,	0,14104,52379,61485,
#Partially deleted in new
chr13	51454163	51518468	chr13:51454163-51518468	0	+	51454163	51454163	8553170	4	166,100,56,236,	0,14104,24845,64069,
#Partially deleted in new
chr13	51454163	51461016	chr13:51454163-51461016	5	+	51454163	51454163	16724991	2	166,532,	0,6321,
#Partially deleted in new
chr13	51454163	51542185	chr13:51454163-51542185	0	+	51454163	51454163	8553170	5	166,100,123,96,261,	0,14104,14608,52379,87761,
#Partially deleted in new
chr13	51454163	51490638	chr13:51454163-51490638	0	+	51454163	51454163	8553170	5	166,100,56,291,176,	0,14104,24845,32439,36299,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	51454163	51552335	chr13:51454163-51552335	0	+	51454163	51454163	8553170	5	166,100,197,64,253,	0,14104,95546,96961,97919,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	51454163	51495669	chr13:51454163-51495669	0	+	51454163	51454163	8553170	5	166,176,100,56,74,	0,13345,14104,24845,41432,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	51454163	51552364	chr13:51454163-51552364	0	+	51454163	51454163	8553170	3	166,197,282,	0,95546,97919,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	51454163	51468373	chr13:51454163-51468373	0	+	51454163	51454163	8553170	3	166,147,514,	0,13374,13696,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	51454163	51550163	chr13:51454163-51550163	0	+	51454163	51454163	8553170	3	166,100,454,	0,14104,95546,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	51454167	51465020	chr13:51454167-51465020	0	+	51454167	51454167	8553170	2	162,3053,	0,7800,
#Partially deleted in new
chr13	51454172	51460557	chr13:51454172-51460557	0	+	51454172	51454172	8553170	2	157,178,	0,6207,
#Partially deleted in new
chr13	51454185	51522241	chr13:51454185-51522241	0	+	51454185	51454185	8553170	4	144,100,96,187,	0,14082,52357,67869,
#Partially deleted in new
chr13	51460524	51461315	chr13:51460524-51461315	5	+	51460524	51460524	16724991	1	791,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	51469752	51470047	chr13:51469752-51470047	3	+	51469752	51469752	8553170	1	295,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	51479037	51549892	chr13:51479037-51549892	0	+	51479037	51479037	8553170	6	27,96,155,195,112,183,	0,27505,29664,39195,70081,70672,
#Deleted in new
chr13	51496019	51496251	chr13:51496019-51496251	7	-	51496019	51496019	16724991	1	232,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	51541557	51549802	chr13:51541557-51549802	0	+	51541557	51541557	8553170	3	627,112,93,	0,7561,8152,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	51541557	51549754	chr13:51541557-51549754	1	+	51541557	51541557	8553170	2	627,45,	0,8152,
#Deleted in new
chr13	51552588	51552667	chr13:51552588-51552667	3	+	51552588	51552588	5263520	1	79,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	51565411	51565509	chr13:51565411-51565509	3	+	51565411	51565411	8553170	1	98,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	51584454	51592586	chr13:51584454-51592586	1	+	51584687	51586076	789624	2	370,6562,	0,1570,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr13	51584507	51767707	chr13:51584507-51767707	3	+	51584687	51759769	789624	12	317,68,74,55,151,113,127,106,102,131,109,7968,	0,76088,90662,119088,134690,143170,154541,166802,170850,171824,173684,175232,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	51593918	51594215	chr13:51593918-51594215	3	-	51593918	51593918	8553170	1	297,	0,
#Partially deleted in new
chr13	51598415	51599460	chr13:51598415-51599460	7	+	51598415	51598415	16724991	2	329,240,	0,805,
#Partially deleted in new
chr13	51739147	51753123	chr13:51739147-51753123	0	+	51739147	51739147	8553170	3	28,106,261,	0,12162,13715,
#Partially deleted in new
chr13	51763950	51845159	chr13:51763950-51845159	3	-	51813226	51838530	789624	11	3328,91,105,62,82,93,83,134,169,81,144,	0,7870,9979,13109,26060,27214,33875,35583,49220,74522,81065,
#Partially deleted in new
chr13	51767992	51804123	chr13:51767992-51804123	3	-	51768186	51804109	789624	10	304,138,91,105,62,82,93,83,134,70,	0,1163,3828,5937,9067,22018,23172,29833,31541,36061,
#Partially deleted in new
chr13	51767994	51804157	chr13:51767994-51804157	1	-	51769123	51799659	789624	8	1299,91,105,62,82,93,134,104,	0,3826,5935,9065,22016,23170,31539,36059,
#Partially deleted in new
chr13	51768614	51774124	chr13:51768614-51774124	0	-	51768614	51768614	8553170	4	115,138,91,195,	0,541,3206,5315,
#Partially deleted in new
chr13	51770783	51804098	chr13:51770783-51804098	1	-	51771238	51799659	789624	8	712,91,105,62,82,93,134,45,	0,1037,3146,6276,19227,20381,28750,33270,
#Partially deleted in new
chr13	51771820	51777383	chr13:51771820-51777383	0	-	51771820	51771820	8553170	4	91,114,62,141,	0,2100,5239,5422,
#Partially deleted in new
chr13	51771820	51790076	chr13:51771820-51790076	0	-	51771820	51771820	8553170	5	91,105,69,62,66,	0,2109,4636,5239,18190,
#Partially deleted in new
chr13	51771820	51804157	chr13:51771820-51804157	0	-	51771820	51771820	8553170	7	91,105,62,82,93,134,104,	0,2109,5239,18190,19344,27713,32233,
#Partially deleted in new
chr13	51772765	51790062	chr13:51772765-51790062	0	-	51772949	51790062	789624	4	268,105,62,52,	0,1164,4294,17245,
#Partially deleted in new
chr13	51790022	51803723	chr13:51790022-51803723	0	-	51790022	51790022	8553170	5	70,93,83,134,181,	0,1142,7803,9511,13520,
#Deleted in new
chr13	51803837	51805630	chr13:51803837-51805630	1	+	51803837	51803837	8553170	1	1793,	0,
#Partially deleted in new
chr13	51804296	51813832	chr13:51804296-51813832	3	+	51804296	51804296	8553170	2	505,676,	0,8860,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	51813346	51845175	chr13:51813346-51845175	1	-	51817048	51838530	789624	3	3767,81,160,	0,25126,31669,
#Partially deleted in new
chr13	51816735	51845150	chr13:51816735-51845150	1	-	51817048	51838530	789624	4	378,60,81,135,	0,9830,21737,28280,
#Partially deleted in new
chr13	51816750	51845152	chr13:51816750-51845152	3	-	51816750	51838530	789624	5	363,83,60,81,137,	0,5304,9815,21722,28265,
#Deleted in new
chr13	51861980	51866232	chr13:51861980-51866232	3	+	51865378	51866080	789624	2	249,901,	0,3351,
#Deleted in new
chr13	51908217	51910621	chr13:51908217-51910621	7	-	51908217	51908217	16724991	1	2404,	0,
#Deleted in new
chr13	51921250	51921587	chr13:51921250-51921587	3	+	51921250	51921250	8553170	1	337,	0,
#Deleted in new
chr13	51930435	51934521	chr13:51930435-51934521	0	-	51930435	51930435	8553170	4	129,117,249,232,	0,1916,2633,3854,
#Partially deleted in new
chr13	51932672	52011494	chr13:51932672-52011494	3	-	51934755	52011337	0	21	2357,103,118,204,143,144,169,183,195,135,155,128,92,234,175,77,162,164,258,1234,208,	0,2920,4603,4803,6378,8408,9713,11436,13611,16989,17334,17599,24843,25638,27475,29164,32199,35771,37819,41262,78614,
#Partially deleted in new
chr13	51932672	52011494	chr13:51932672-52011494	1	-	51934755	52011337	789624	20	2357,103,118,204,143,144,169,183,195,135,155,128,92,175,77,162,164,258,1234,208,	0,2920,4603,4803,6378,8408,9713,11436,13611,16989,17334,17599,24843,27475,29164,32199,35771,37819,41262,78614,
#Partially deleted in new
chr13	51932673	52011339	chr13:51932673-52011339	1	-	51934755	52011337	0	17	2356,103,118,204,143,144,169,183,195,155,128,92,162,164,258,1234,53,	0,2919,4602,4802,6377,8407,9712,11435,13610,17333,17598,24842,32198,35770,37818,41261,78613,
#Partially deleted in new
chr13	51932673	52011494	chr13:51932673-52011494	1	-	51934755	52011337	0	22	2356,103,118,204,143,144,169,183,195,135,155,128,92,234,175,77,162,164,258,150,751,208,	0,2919,4602,4802,6377,8407,9712,11435,13610,16988,17333,17598,24842,25637,27474,29163,32198,35770,37818,41261,41744,78613,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr13	51932673	51960010	chr13:51932673-51960010	0	-	51932673	51932673	8553170	14	2356,103,118,204,143,144,169,183,195,135,155,128,92,1700,	0,2919,4602,4802,6377,8407,9712,11435,13610,16988,17333,17598,24842,25637,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr13	51934244	51970526	chr13:51934244-51970526	0	-	51934244	51934244	8553170	17	785,103,118,204,143,144,169,183,195,81,155,128,2807,77,162,164,35,	0,1348,3031,3231,4806,6836,8141,9864,12039,15471,15762,16027,23271,27592,30627,34199,36247,
#Partially deleted in new
chr13	51934603	51964876	chr13:51934603-51964876	0	-	51958498	51964876	789624	15	426,103,118,204,143,144,169,195,135,155,128,92,234,77,5,	0,989,2672,2872,4447,6477,7782,11680,15058,15403,15668,22912,23707,27233,30268,
#Partially deleted in new
chr13	51934685	52011411	chr13:51934685-52011411	1	-	51934755	52011337	789624	13	344,103,118,204,143,144,169,183,195,135,155,1234,125,	0,907,2590,2790,4365,6395,7700,9423,11598,14976,15321,39249,76601,
#Partially deleted in new
chr13	51934685	52011411	chr13:51934685-52011411	1	-	51934755	52011337	789624	21	344,103,118,204,143,144,169,183,195,135,155,128,92,90,175,77,162,164,258,1234,125,	0,907,2590,2790,4365,6395,7700,9423,11598,14976,15321,15586,22830,23625,25462,27151,30186,33758,35806,39249,76601,
#Partially deleted in new
chr13	51934690	52011409	chr13:51934690-52011409	0	-	51946444	52011337	789624	21	339,103,118,204,143,144,169,183,195,20,135,155,128,92,175,77,162,164,258,1234,123,	0,902,2585,2785,4360,6390,7695,9418,11593,13160,14971,15316,15581,22825,25457,27146,30181,33753,35801,39244,76596,
#Partially deleted in new
chr13	51934692	52011411	chr13:51934692-52011411	1	-	51934755	52011337	789624	20	337,103,118,204,143,144,169,183,135,155,128,92,234,175,77,162,164,258,1234,125,	0,900,2583,2783,4358,6388,7693,9416,14969,15314,15579,22823,23618,25455,27144,30179,33751,35799,39242,76594,
#Partially deleted in new
chr13	51944108	51946563	chr13:51944108-51946563	0	-	51944108	51944108	8553170	2	183,280,	0,2175,
#Partially deleted in new
chr13	51944191	52012125	chr13:51944191-52012125	0	-	51944191	51944191	8553170	4	100,195,105,106,	0,2092,67095,67828,
#Partially deleted in new
chr13	51958363	51978991	chr13:51958363-51978991	0	-	51958363	51958363	8553170	4	181,258,1234,172,	0,12128,15571,20456,
#Partially deleted in new
chr13	51964773	51973975	chr13:51964773-51973975	0	-	51964773	51964773	8553170	4	260,164,258,41,	0,3670,5718,9161,
#Deleted in new
chr13	51966741	51967149	chr13:51966741-51967149	7	+	51966741	51966741	16724991	1	408,	0,
#Partially deleted in new
chr13	52012397	52029657	chr13:52012397-52029657	1	+	52012418	52028385	789624	2	65,1339,	0,15921,
#Partially deleted in new
chr13	52012403	52024446	chr13:52012403-52024446	0	+	52012548	52024446	8553170	3	171,231,441,	0,6509,11602,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	52012410	52017713	chr13:52012410-52017713	1	+	52012418	52015831	789624	2	52,1931,	0,3372,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	52012410	52032171	chr13:52012410-52032171	1	+	52012548	52028385	8553170	3	164,231,3853,	0,6502,15908,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	52012410	52024204	chr13:52012410-52024204	0	+	52012410	52012410	8553170	4	52,231,67,199,	0,6502,11302,11595,
#Partially deleted in new
chr13	52012413	52029664	chr13:52012413-52029664	3	+	52012418	52028590	789624	4	49,231,932,1346,	0,6499,11592,15905,
#Partially deleted in new
chr13	52019102	52028689	chr13:52019102-52028689	0	+	52019102	52024622	8553170	3	41,352,371,	0,5483,9216,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	52020568	52028749	chr13:52020568-52028749	0	+	52020568	52020568	8553170	3	3211,932,431,	0,3437,7750,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	52024690	52033600	chr13:52024690-52033600	3	+	52028804	52031105	789624	2	247,5282,	0,3628,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	52033610	52062132	chr13:52033610-52062132	0	-	52033610	52033610	8553170	3	3608,118,314,	0,16493,28208,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr13	52036947	52129078	chr13:52036947-52129078	1	-	52036947	52127482	8553170	25	271,118,135,126,127,69,81,75,93,87,117,67,182,134,82,201,55,87,71,84,98,97,139,68,50,	0,13156,24871,28536,34996,38810,39115,45290,46312,49329,50390,52299,56106,62795,64985,65144,67550,71370,73392,73546,75320,82371,90418,90647,92081,
#Partially deleted in new
chr13	52037079	52127482	chr13:52037079-52127482	0	-	52089304	52127482	789624	18	139,118,135,126,127,69,87,117,67,69,201,55,87,71,84,98,97,117,	0,13024,24739,28404,34864,38678,49197,50258,52167,64853,65012,67418,71238,73260,73414,75188,82239,90286,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr13	52064755	52129078	chr13:52064755-52129078	3	-	52065406	52127482	789624	22	854,127,69,81,75,93,87,117,67,182,134,82,201,55,87,71,84,98,97,139,68,50,	0,7188,11002,11307,17482,18504,21521,22582,24491,28298,34987,37177,37336,39742,43562,45584,45738,47512,54563,62610,62839,64273,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr13	52065406	52127482	chr13:52065406-52127482	1	-	52065406	52127482	789624	20	203,127,69,81,75,93,87,117,67,182,134,82,201,55,87,71,84,98,97,117,	0,6537,10351,10656,16831,17853,20870,21931,23840,27647,34336,36526,36685,39091,42911,44933,45087,46861,53912,61959,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	52128890	52132723	chr13:52128890-52132723	3	+	52128890	52128890	789624	2	3167,266,	0,3567,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr13	52132638	52159560	chr13:52132638-52159560	1	-	52133141	52156191	789624	16	588,127,135,117,103,50,73,201,55,87,68,84,98,94,174,18,	0,1050,3090,3477,4161,8381,11276,12052,15776,18507,18686,19970,21256,21441,23436,26904,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr13	52132642	52159861	chr13:52132642-52159861	3	-	52133141	52156191	789624	16	584,127,135,144,103,50,73,201,55,87,68,84,98,94,174,319,	0,1046,3086,3473,4157,8377,11272,12048,15772,18503,18682,19966,21252,21437,23432,26900,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr13	52132642	52159861	chr13:52132642-52159861	1	-	52133141	52156191	789624	15	584,127,135,144,103,72,201,55,87,68,84,98,94,174,319,	0,1046,3086,3473,4157,11273,12048,15772,18503,18682,19966,21252,21437,23432,26900,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr13	52132643	52159535	chr13:52132643-52159535	1	-	52133141	52156191	789624	16	583,127,135,144,103,50,73,201,55,87,68,84,98,94,174,338,	0,1045,3085,3472,4156,8376,11271,12047,15771,18502,18681,19965,21251,21436,23431,26554,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	52132644	52133839	chr13:52132644-52133839	0	-	52132644	52132644	8553170	2	582,151,	0,1044,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr13	52132650	52157485	chr13:52132650-52157485	0	-	52136882	52156191	789624	14	576,127,135,144,103,73,201,55,87,68,84,98,94,1411,	0,1038,3078,3465,4149,11264,12040,15764,18495,18674,19958,21244,21429,23424,
#Partially deleted in new
chr13	52133172	52143980	chr13:52133172-52143980	0	-	52133172	52143980	789624	6	54,127,144,103,50,66,	0,516,2943,3627,7847,10742,
#Partially deleted in new
chr13	52144771	52159583	chr13:52144771-52159583	0	-	52153968	52156191	789624	8	120,55,87,68,84,98,174,41,	0,3643,6374,6553,7837,9123,11303,14771,
#Partially deleted in new
chr13	52148141	52159550	chr13:52148141-52159550	0	-	52148141	52148141	8553170	8	328,87,68,84,98,94,174,8,	0,3004,3183,4467,5753,5938,7933,11401,
#Partially deleted in new
chr13	52153968	52156191	chr13:52153968-52156191	1	-	52153968	52156191	789624	2	24,117,	0,2106,
#Partially deleted in new
chr13	52154116	52159535	chr13:52154116-52159535	0	-	52154116	52156191	789624	3	57,174,338,	0,1958,5081,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr13	52167708	52194465	chr13:52167708-52194465	7	-	52167708	52167708	16724991	9	1596,113,91,138,73,139,141,589,614,	0,2278,3449,7930,12873,16267,18974,21930,26143,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr13	52167708	52291557	chr13:52167708-52291557	3	-	52167708	52167708	8553170	22	1596,113,91,138,73,139,141,276,93,92,106,81,62,89,82,62,65,64,100,120,162,51,	0,2278,3449,7930,12873,16267,18974,21930,55530,59296,61617,65355,67511,86036,86228,90820,112132,112943,113153,115529,122113,123798,
#Deleted in new
chr13	52167953	52168321	chr13:52167953-52168321	7	-	52167953	52167953	16724991	1	368,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	52169094	52171826	chr13:52169094-52171826	4	-	52169094	52169094	16724991	4	210,70,91,114,	0,892,2063,2618,
#Partially deleted in new
chr13	52169986	52171248	chr13:52169986-52171248	7	-	52169986	52169986	16724991	2	70,91,	0,1171,
#Partially deleted in new
chr13	52171216	52194420	chr13:52171216-52194420	4	-	52171216	52171216	16724991	5	32,138,73,141,167,	0,4422,9365,15466,23037,
#Partially deleted in new
chr13	52175638	52194378	chr13:52175638-52194378	5	-	52175638	52175638	16724991	6	138,73,136,141,276,156,	0,4943,8634,11044,14000,18584,
#Partially deleted in new
chr13	52189632	52194412	chr13:52189632-52194412	4	-	52189632	52189632	16724991	3	282,123,159,	0,3478,4621,
#Partially deleted in new
chr13	52219343	52325605	chr13:52219343-52325605	7	-	52219343	52219343	16724991	22	287,71,93,92,106,81,62,89,82,65,64,100,120,162,51,63,54,54,109,140,102,66,	0,2392,3895,7661,9982,13720,15876,34401,34593,60497,61308,61518,63894,70478,72163,78422,88902,89852,103936,104486,104722,106196,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	52219351	52254020	chr13:52219351-52254020	4	-	52219351	52219351	16724991	6	3282,93,92,106,89,84,	0,3887,7653,9974,34393,34585,
#Partially deleted in new
chr13	52219527	52297828	chr13:52219527-52297828	5	-	52219527	52219527	16724991	17	103,71,93,92,106,81,62,89,82,62,65,64,100,120,162,51,63,	0,2208,3711,7477,9798,13536,15692,34217,34409,39001,60313,61124,61334,63710,70294,71979,78238,
#Partially deleted in new
chr13	52219593	52235280	chr13:52219593-52235280	4	-	52219593	52219593	16724991	6	37,93,92,106,81,128,	0,3645,7411,9732,13470,15559,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	52313628	52334051	chr13:52313628-52334051	4	-	52313628	52313628	16724991	8	331,54,57,109,118,102,107,125,	0,2717,6921,9651,10168,10437,19426,20298,
#Partially deleted in new
chr13	52325638	52334277	chr13:52325638-52334277	5	-	52325638	52325638	16724991	3	47,107,351,	0,7416,8288,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	52334294	52341896	chr13:52334294-52341896	3	+	52334294	52334294	789624	3	83,165,604,	0,6598,6998,
#Partially deleted in new
chr13	52377166	52406494	chr13:52377166-52406494	1	-	52377410	52402600	789624	4	1623,963,139,464,	0,20065,25376,28864,
#Partially deleted in new
chr13	52377186	52406128	chr13:52377186-52406128	3	-	52377410	52402600	789624	5	1603,159,963,139,98,	0,8841,20045,25356,28844,
#Partially deleted in new
chr13	52377198	52416373	chr13:52377198-52416373	1	-	52377410	52402600	8553170	4	1591,963,139,357,	0,20033,25344,38818,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	52400003	52400099	chr13:52400003-52400099	3	+	52400003	52400003	8553170	1	96,	0,
#Partially deleted in new
chr13	52412601	52450622	chr13:52412601-52450622	3	-	52415829	52450594	0	14	3322,77,85,65,66,135,78,33,87,90,115,71,69,124,	0,3415,4455,5390,10972,13330,14387,14585,21060,22191,23688,26496,29775,37897,
#Partially deleted in new
chr13	52412601	52450244	chr13:52412601-52450244	1	-	52415829	52439159	0	14	3322,77,85,65,66,135,78,33,87,90,115,71,69,314,	0,3415,4455,5390,10972,13330,14387,14585,21060,22191,23688,26496,29775,37329,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr13	52412601	52450622	chr13:52412601-52450622	0	-	52417609	52450594	8553170	15	3322,77,85,243,65,66,135,78,33,87,90,115,71,69,124,	0,3415,4455,4835,5390,10972,13330,14387,14585,21060,22191,23688,26496,29775,37897,
#Partially deleted in new
chr13	52413153	52416307	chr13:52413153-52416307	0	-	52413153	52413153	8553170	2	73,291,	0,2863,
#Partially deleted in new
chr13	52415524	52416161	chr13:52415524-52416161	0	-	52415524	52415524	8553170	2	399,145,	0,492,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	52416153	52418448	chr13:52416153-52418448	0	-	52416153	52416153	8553170	2	1526,457,	0,1838,
#Partially deleted in new
chr13	52425769	52429367	chr13:52425769-52429367	0	-	52425769	52425769	8553170	4	297,78,33,132,	0,1219,1417,3466,
#Partially deleted in new
chr13	52434837	52450244	chr13:52434837-52450244	0	-	52434837	52434837	8553170	5	45,115,71,69,314,	0,1452,4260,7539,15093,
#Partially deleted in new
chr13	52435920	52450628	chr13:52435920-52450628	0	-	52435920	52435920	8553170	4	484,71,69,130,	0,3177,6456,14578,
#Partially deleted in new
chr13	52454774	52455331	chr13:52454774-52455331	3	-	52454774	52454774	8553170	1	557,	0,
#Partially deleted in new
chr13	52455428	52461353	chr13:52455428-52461353	0	+	52461072	52461353	789624	3	198,85,296,	0,1094,5629,
#Partially deleted in new
chr13	52455438	52476349	chr13:52455438-52476349	3	+	52455556	52475141	789624	9	188,85,76,869,205,171,70,256,1455,	0,1084,5460,5619,6924,9856,12839,18390,19456,
#Partially deleted in new
chr13	52455438	52465843	chr13:52455438-52465843	1	+	52455556	52465474	789624	6	188,85,76,869,205,549,	0,1084,5460,5619,6924,9856,
#Partially deleted in new
chr13	52455466	52476628	chr13:52455466-52476628	1	+	52455556	52475141	789624	9	160,85,79,869,205,171,70,256,1734,	0,1056,5429,5591,6896,9828,12811,18362,19428,
#Partially deleted in new
chr13	52455971	52476349	chr13:52455971-52476349	1	+	52456596	52475141	789624	9	208,85,76,869,205,171,70,256,1455,	0,551,4927,5086,6391,9323,12306,17857,18923,
#Partially deleted in new
chr13	52456007	52461258	chr13:52456007-52461258	0	+	52456596	52461258	789624	4	172,85,79,201,	0,515,4888,5050,
#Partially deleted in new
chr13	52473534	52475142	chr13:52473534-52475142	0	+	52473534	52473534	8553170	2	550,248,	0,1360,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	52482803	52489216	chr13:52482803-52489216	3	-	52482803	52482803	8553170	2	1481,324,	0,6089,
#Partially deleted in new
chr13	52484160	52484680	chr13:52484160-52484680	0	-	52484160	52484160	8553170	2	124,161,	0,359,
#Partially deleted in new
chr13	52488992	52520913	chr13:52488992-52520913	5	+	52488992	52488992	16724991	8	351,107,113,339,109,54,54,667,	0,1116,8569,10050,10829,14327,15288,31254,
#Partially deleted in new
chr13	52488992	52499305	chr13:52488992-52499305	5	+	52488992	52488992	16724991	3	351,107,263,	0,1116,10050,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	52497096	52500195	chr13:52497096-52500195	3	-	52497096	52497096	8553170	1	3099,	0,
#Partially deleted in new
chr13	52503319	52586906	chr13:52503319-52586906	7	+	52503319	52503319	16724991	19	54,54,63,51,162,120,100,64,65,61,82,89,62,81,106,92,93,71,97,	0,961,11468,17739,19314,25945,28281,28527,29337,44563,49133,49318,67912,70046,73751,76024,79776,81313,83490,
#Partially deleted in new
chr13	52570152	52583492	chr13:52570152-52583492	4	+	52570152	52570152	16724991	4	314,62,92,397,	0,1079,9191,12943,
#Partially deleted in new
chr13	52573373	52587095	chr13:52573373-52587095	5	+	52573373	52573373	16724991	5	73,92,93,536,286,	0,5970,9722,11259,13436,
#Partially deleted in new
chr13	52600041	52642501	chr13:52600041-52642501	0	+	52600041	52600041	8553170	4	179,141,142,96,	0,27396,37263,42364,
#Partially deleted in new
chr13	52600074	52642542	chr13:52600074-52642542	0	+	52600074	52600074	8553170	5	146,141,73,142,174,	0,27363,32347,37230,42294,
#Partially deleted in new
chr13	52600118	52637368	chr13:52600118-52637368	7	+	52600118	52600118	16724991	4	102,276,141,64,	0,21870,27319,37186,
#Partially deleted in new
chr13	52600137	52642515	chr13:52600137-52642515	3	+	52600137	52600137	8553170	6	83,276,141,73,142,110,	0,21851,27300,32284,37167,42268,
#Partially deleted in new
chr13	52617557	52637446	chr13:52617557-52637446	5	+	52617557	52617557	16724991	6	153,276,141,141,73,142,	0,4431,9880,11661,14864,19747,
#Deleted in new
chr13	52642424	52643796	chr13:52642424-52643796	3	+	52642492	52643455	789624	1	1372,	0,
#Deleted in new
chr13	52651304	52652279	chr13:52651304-52652279	3	-	52651304	52651304	8553170	1	975,	0,
#Partially deleted in new
chr13	52652708	52665649	chr13:52652708-52665649	0	+	52652708	52652708	8553170	10	250,58,91,128,70,71,54,17,23,13,	0,337,4823,5390,5690,6470,9940,10387,11326,12928,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr13	52652865	52700909	chr13:52652865-52700909	3	+	52652920	52687835	0	13	93,58,91,70,71,54,17,23,97,108,91,182,13176,	0,180,4666,5533,6313,9783,10230,11169,12771,13946,23364,27108,34868,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	52687143	52689945	chr13:52687143-52689945	0	+	52687143	52687143	8553170	1	2802,	0,
#Partially deleted in new
chr13	52703263	52739812	chr13:52703263-52739812	1	-	52703594	52739701	789624	7	544,167,154,114,141,141,183,	0,5272,9452,20733,29955,35767,36366,
#Partially deleted in new
chr13	52703268	52739780	chr13:52703268-52739780	3	-	52703594	52739701	789624	7	542,167,154,114,141,141,151,	0,5267,9447,20728,29950,35762,36361,
#Partially deleted in new
chr13	52712715	52739352	chr13:52712715-52739352	0	-	52712715	52733338	789624	4	154,114,141,322,	0,11281,20503,26315,
#Deleted in new
chr13	52810049	52810140	chr13:52810049-52810140	3	+	52810049	52810049	5263520	1	91,	0,
#Deleted in new
chr13	52820496	52821018	chr13:52820496-52821018	7	+	52820496	52820496	16724991	1	522,	0,
#Deleted in new
chr13	52842888	52848640	chr13:52842888-52848640	3	-	52844559	52848436	789624	3	2045,208,2835,	0,2536,2917,
#Deleted in new
chr13	52843978	52848641	chr13:52843978-52848641	1	-	52844559	52848436	789624	3	955,208,2545,	0,1446,2118,
#Deleted in new
chr13	52844458	52845693	chr13:52844458-52845693	0	-	52844458	52844458	8553170	2	475,269,	0,966,
#Partially deleted in new
chr13	53028758	53052057	chr13:53028758-53052057	3	+	53028836	53050771	789624	5	282,153,213,160,2089,	0,5589,13151,14346,21210,
#Partially deleted in new
chr13	53146538	53151808	chr13:53146538-53151808	3	-	53146538	53146538	8553170	3	364,108,105,	0,1718,5165,
#Partially deleted in new
chr13	53193666	53198540	chr13:53193666-53198540	3	+	53193666	53193666	8553170	2	78,487,	0,4387,
#Deleted in new
chr13	53199980	53202753	chr13:53199980-53202753	7	+	53199980	53199980	16724991	1	2773,	0,
#Deleted in new
chr13	53201506	53201984	chr13:53201506-53201984	4	+	53201506	53201506	16724991	1	478,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	53258076	53258372	chr13:53258076-53258372	3	+	53258076	53258076	8553170	1	296,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	53345210	53410880	chr13:53345210-53410880	3	+	53345210	53345210	8553170	3	748,228,881,	0,45215,64789,
#Deleted in new
chr13	53408881	53409876	chr13:53408881-53409876	7	-	53408881	53408881	16724991	1	995,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	53815418	53876119	chr13:53815418-53876119	3	+	53815418	53815418	789624	6	75,51,128,178,63,2668,	0,23320,25264,28926,55046,58033,
#Partially deleted in new
chr13	54115848	54127343	chr13:54115848-54127343	0	-	54115848	54115848	8553170	2	361,64,	0,11431,
#Deleted in new
chr13	54116475	54116851	chr13:54116475-54116851	7	+	54116475	54116475	16724991	1	376,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	54124812	54132851	chr13:54124812-54132851	1	-	54124812	54124812	8553170	3	460,150,239,	0,2467,7800,
#Deleted in new
chr13	54311971	54312048	chr13:54311971-54312048	3	-	54311971	54311971	5263520	1	77,	0,
#Deleted in new
chr13	54440703	54441315	chr13:54440703-54441315	7	-	54440703	54440703	16724991	1	612,	0,
#Partially deleted in new
chr13	55062944	55161490	chr13:55062944-55161490	3	+	55062944	55062944	8553170	3	58,67,534,	0,43825,98012,
#Deleted in new
chr13	55128284	55128444	chr13:55128284-55128444	3	+	55128284	55128284	8553170	1	160,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	55174453	55174548	chr13:55174453-55174548	3	+	55174453	55174453	5263520	1	95,	0,
#Duplicated in new
chr13	55535696	55583524	chr13:55535696-55583524	3	-	55535696	55535696	8553170	3	650,124,35,	0,19164,47793,
#Deleted in new
chr13	55999199	56000448	chr13:55999199-56000448	7	-	55999199	55999199	16724991	1	1249,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	56214372	56216942	chr13:56214372-56216942	7	+	56214372	56214372	16724991	2	173,1882,	0,688,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	56885283	56885602	chr13:56885283-56885602	3	-	56885283	56885283	8553170	1	319,	0,
#Deleted in new
chr13	57140917	57143939	chr13:57140917-57143939	3	+	57141304	57142991	789624	3	214,71,1562,	0,368,1460,
#Partially deleted in new
chr13	57140917	57157082	chr13:57140917-57157082	3	+	57154447	57156134	789624	3	214,71,1562,	0,13511,14603,
#Deleted in new
chr13	57147487	57150509	chr13:57147487-57150509	3	+	57147874	57149561	789624	3	214,71,1562,	0,368,1460,
#Deleted in new
chr13	57154060	57157082	chr13:57154060-57157082	1	+	57154447	57156134	789624	3	214,71,1562,	0,368,1460,
#Deleted in new
chr13	57160631	57163653	chr13:57160631-57163653	3	+	57161018	57162705	789624	3	214,71,1562,	0,368,1460,
#Deleted in new
chr13	57167196	57170218	chr13:57167196-57170218	3	+	57167583	57169270	789624	3	214,71,1562,	0,368,1460,
#Deleted in new
chr13	57173452	57173632	chr13:57173452-57173632	7	+	57173452	57173452	16724991	1	180,	0,
#Deleted in new
chr13	57204378	57204799	chr13:57204378-57204799	7	+	57204378	57204378	16724991	1	421,	0,
#Partially deleted in new
chr13	57314738	57315909	chr13:57314738-57315909	7	+	57314738	57314738	16724991	2	727,142,	0,1029,
#Partially deleted in new
chr13	57391170	57391518	chr13:57391170-57391518	7	-	57391170	57391170	16724991	1	348,	0,
#Partially deleted in new
chr13	57631809	57725540	chr13:57631809-57725540	0	+	57632546	57666698	789624	4	3302,59,181,929,	0,34658,34843,92802,
#Partially deleted in new
chr13	57631811	57729311	chr13:57631811-57729311	3	+	57632546	57725294	789624	4	3300,59,173,4700,	0,34656,34849,92800,
#Deleted in new
chr13	57632758	57633575	chr13:57632758-57633575	3	-	57632758	57632758	8553170	2	132,522,	0,295,
#Partially deleted in new
chr13	57634382	57725293	chr13:57634382-57725293	0	+	57634382	57725293	789624	4	729,59,170,682,	0,32085,32281,90229,
#Partially deleted in new
chr13	57635012	57724748	chr13:57635012-57724748	0	+	57635012	57724748	789624	5	99,59,173,84,137,	0,31455,31648,74656,89599,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	57991349	57991464	chr13:57991349-57991464	7	+	57991349	57991349	16724991	1	115,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	58165826	58209483	chr13:58165826-58209483	3	+	58165826	58165826	789624	3	81,130,2542,	0,40432,41115,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	58211696	58233117	chr13:58211696-58233117	3	-	58211696	58211696	789624	7	131,58,132,63,60,73,283,	0,3929,9440,10169,15860,17441,21138,
#Partially deleted in new
chr13	58377512	58377774	chr13:58377512-58377774	7	+	58377512	58377512	16724991	1	262,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	58527654	58527751	chr13:58527654-58527751	3	-	58527654	58527654	8553170	1	97,	0,
#Deleted in new
chr13	58528614	58531026	chr13:58528614-58531026	7	+	58528614	58528614	16724991	1	2412,	0,
#Deleted in new
chr13	58751046	58752233	chr13:58751046-58752233	7	-	58751046	58751046	16724991	1	1187,	0,
#Deleted in new
chr13	59010331	59010604	chr13:59010331-59010604	7	+	59010331	59010331	16724991	1	273,	0,
#Deleted in new
chr13	59071461	59071803	chr13:59071461-59071803	7	-	59071461	59071461	16724991	1	342,	0,
#Deleted in new
chr13	59262679	59263391	chr13:59262679-59263391	7	+	59262679	59262679	16724991	1	712,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	59480069	59480132	chr13:59480069-59480132	3	+	59480069	59480069	8553170	1	63,	0,
#Partially deleted in new
chr13	59665582	60163987	chr13:59665582-60163987	3	-	59666583	60163766	0	28	1264,60,96,136,165,125,130,240,102,95,96,115,309,105,65,119,117,119,111,106,137,70,75,131,105,177,33,401,	0,108606,109145,145205,167524,173741,195824,213646,246152,250572,259192,304361,305269,308769,315212,318186,325575,326485,326890,342961,344950,350330,350488,377107,428045,446427,467374,498004,
#Partially deleted in new
chr13	59665691	59751021	chr13:59665691-59751021	0	-	59665691	59665691	8553170	2	1155,183,	0,85147,
#Partially deleted in new
chr13	59666583	60163766	chr13:59666583-60163766	1	-	59666583	60163766	0	27	263,60,96,136,165,125,130,240,102,95,96,115,309,105,65,119,117,119,111,106,137,70,75,131,105,177,180,	0,107605,108144,144204,166523,172740,194823,212645,245151,249571,258191,303360,304268,307768,314211,317185,324574,325484,325889,341960,343949,349329,349487,376106,427044,445426,497003,
#Partially deleted in new
chr13	59666583	60163766	chr13:59666583-60163766	1	-	59666583	60163766	0	26	263,60,96,136,165,125,130,240,102,95,96,115,309,105,65,119,117,119,111,106,137,70,75,131,105,180,	0,107605,108144,144204,166523,172740,194823,212645,245151,249571,258191,303360,304268,307768,314211,317185,324574,325484,325889,341960,343949,349329,349487,376106,427044,497003,
#Partially deleted in new
chr13	59666583	60163766	chr13:59666583-60163766	1	-	59666583	60163766	0	26	263,60,96,136,165,125,130,240,102,95,96,115,309,105,65,119,117,119,111,106,137,70,75,131,177,180,	0,107605,108144,144204,166523,172740,194823,212645,245151,249571,258191,303360,304268,307768,314211,317185,324574,325484,325889,341960,343949,349329,349487,376106,445426,497003,
#Partially deleted in new
chr13	59666740	59696193	chr13:59666740-59696193	0	-	59666740	59666740	8553170	3	106,194,168,	0,28511,29285,
#Partially deleted in new
chr13	59774058	60163766	chr13:59774058-60163766	1	-	59774168	60163766	0	27	190,96,136,165,125,130,240,102,95,96,115,309,105,65,119,117,119,111,106,137,70,75,131,105,177,33,180,	0,669,36729,59048,65265,87348,105170,137676,142096,150716,195885,196793,200293,206736,209710,217099,218009,218414,234485,236474,241854,242012,268631,319569,337951,358898,389528,
#Partially deleted in new
chr13	59774162	60013209	chr13:59774162-60013209	1	-	59774168	60010651	0	21	86,96,136,165,125,130,240,102,95,96,115,309,105,65,119,117,119,111,106,137,161,	0,565,36625,58944,65161,87244,105066,137572,141992,150612,195781,196689,200189,206632,209606,216995,217905,218310,234381,236370,238886,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	59837674	59861432	chr13:59837674-59861432	0	-	59837674	59837674	8553170	2	1774,26,	0,23732,
#Partially deleted in new
chr13	59861253	60013178	chr13:59861253-60013178	1	-	59861278	60010651	0	16	283,240,102,95,96,115,309,105,65,119,117,119,111,106,137,130,	0,17975,50481,54901,63521,108690,109598,113098,119541,122515,129904,130814,131219,147290,149279,151795,
#Partially deleted in new
chr13	60012750	60044357	chr13:60012750-60044357	3	+	60012750	60012750	789624	4	108,88,109,162,	0,8170,29930,31445,
#Partially deleted in new
chr13	60013302	60044357	chr13:60013302-60044357	1	+	60013302	60013302	789624	4	69,88,109,162,	0,7618,29378,30893,
#Partially deleted in new
chr13	60013305	60044357	chr13:60013305-60044357	0	+	60013305	60013305	789624	3	66,109,162,	0,29375,30890,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	60034464	60034762	chr13:60034464-60034762	3	-	60034464	60034464	8553170	1	298,	0,
#Partially deleted in new
chr13	60144697	60153505	chr13:60144697-60153505	3	+	60144697	60144697	789624	3	166,91,110,	0,2557,8698,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	60187737	60187830	chr13:60187737-60187830	3	-	60187737	60187737	8553170	1	93,	0,
#Deleted in new
chr13	60214351	60214946	chr13:60214351-60214946	3	-	60214351	60214351	8553170	2	350,69,	0,526,
#Deleted in new
chr13	60274775	60276006	chr13:60274775-60276006	7	+	60274775	60274775	16724991	1	1231,	0,
#Deleted in new
chr13	60322590	60322766	chr13:60322590-60322766	7	+	60322590	60322590	16724991	1	176,	0,
#Partially deleted in new
chr13	60396456	60573878	chr13:60396456-60573878	1	+	60460466	60567641	0	14	554,85,62,161,142,72,150,141,157,126,851,126,126,266,	0,43231,48230,63923,70781,87318,89342,97978,113306,114173,131910,138651,171068,177156,
#Partially deleted in new
chr13	60396938	60528837	chr13:60396938-60528837	0	+	60460466	60484755	789624	11	72,85,161,142,72,65,150,141,378,126,471,	0,42749,63441,70299,86836,87754,88860,97496,112603,113691,131428,
#Partially deleted in new
chr13	60396987	60573877	chr13:60396987-60573877	1	+	60460466	60567641	0	14	23,85,62,161,142,72,150,141,157,126,851,126,126,262,	0,42700,47699,63392,70250,86787,88811,97447,112775,113642,131379,138120,170537,176628,
#Partially deleted in new
chr13	60397292	60573878	chr13:60397292-60573878	3	+	60397364	60567641	0	14	113,85,66,161,142,72,150,141,157,126,851,126,126,263,	0,42395,47390,63087,69945,86482,88506,97142,112470,113337,131074,137815,170232,176323,
#Partially deleted in new
chr13	60397333	60573872	chr13:60397333-60573872	1	+	60460466	60567641	0	14	72,85,66,161,142,72,150,141,157,126,851,126,126,257,	0,42354,47349,63046,69904,86441,88465,97101,112429,113296,131033,137774,170191,176282,
#Partially deleted in new
chr13	60434046	60573870	chr13:60434046-60573870	1	+	60460466	60567641	0	14	39,85,66,161,142,72,147,141,157,126,851,126,126,258,	0,5641,10636,26333,33191,49728,51755,60388,75716,76583,94320,101061,133478,139566,
#Partially deleted in new
chr13	60434048	60485899	chr13:60434048-60485899	0	+	60460466	60485899	789624	7	37,85,62,161,142,72,101,	0,5639,10638,26331,33189,49726,51750,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	60444686	60461040	chr13:60444686-60461040	0	+	60444686	60444686	8553170	2	62,661,	0,15693,
#Partially deleted in new
chr13	60528962	60538086	chr13:60528962-60538086	0	+	60528962	60528962	8553170	2	255,2979,	0,6145,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	60613607	60613734	chr13:60613607-60613734	7	+	60613607	60613607	16724991	1	127,	0,
#Deleted in new
chr13	60636887	60638097	chr13:60636887-60638097	7	-	60636887	60636887	16724991	1	1210,	0,
#Partially deleted in new
chr13	60685198	60694068	chr13:60685198-60694068	3	+	60685198	60685198	8553170	3	154,92,157,	0,5574,8713,
#Partially deleted in new
chr13	60685198	60694528	chr13:60685198-60694528	0	+	60685198	60685198	8553170	3	154,92,78,	0,5574,9252,
#Deleted in new
chr13	60730175	60733600	chr13:60730175-60733600	3	+	60730175	60730175	8553170	1	3425,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	60789559	60789661	chr13:60789559-60789661	3	+	60789559	60789559	8553170	1	102,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	60917000	60941768	chr13:60917000-60941768	3	+	60917000	60917000	8553170	2	238,1362,	0,23406,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	60917041	60920319	chr13:60917041-60920319	1	+	60917041	60917041	8553170	2	197,507,	0,2771,
#Partially deleted in new
chr13	61199797	61199880	chr13:61199797-61199880	3	-	61199797	61199797	5263520	1	83,	0,
#Deleted in new
chr13	61409684	61415522	chr13:61409684-61415522	3	-	61411242	61415158	789624	2	4282,496,	0,5342,
#Partially deleted in new
chr13	61409857	61427849	chr13:61409857-61427849	3	-	61411242	61415158	8553170	5	4109,468,117,1296,357,	0,5169,5910,16062,17635,
#Deleted in new
chr13	61424688	61427946	chr13:61424688-61427946	3	-	61424688	61424688	789624	2	298,454,	0,2804,
#Deleted in new
chr13	61805149	61805676	chr13:61805149-61805676	7	+	61805149	61805149	16724991	1	527,	0,
#Deleted in new
chr13	61927089	61927272	chr13:61927089-61927272	7	-	61927089	61927089	16724991	1	183,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	62003524	62029548	chr13:62003524-62029548	3	-	62003524	62003524	789624	2	986,290,	0,25734,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	62212576	62249947	chr13:62212576-62249947	3	+	62212576	62212576	789624	4	53,97,99,121,	0,11521,15057,37250,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	62321304	62322398	chr13:62321304-62322398	3	+	62321304	62321304	789624	2	82,473,	0,621,
#Partially deleted in new
chr13	62323656	62328833	chr13:62323656-62328833	3	+	62323656	62323656	789624	2	298,78,	0,5099,
#Deleted in new
chr13	62327987	62328384	chr13:62327987-62328384	7	+	62327987	62327987	16724991	1	397,	0,
#Deleted in new
chr13	62397644	62397916	chr13:62397644-62397916	7	+	62397644	62397644	16724991	1	272,	0,
#Deleted in new
chr13	62406057	62406916	chr13:62406057-62406916	7	-	62406057	62406057	16724991	1	859,	0,
#Partially deleted in new
chr13	62672284	62732180	chr13:62672284-62732180	3	-	62672284	62672284	8553170	4	174,90,82,87,	0,13720,28331,59809,
#Deleted in new
chr13	62731859	62732359	chr13:62731859-62732359	1	-	62731859	62731859	8553170	2	336,66,	0,434,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	63034991	63097797	chr13:63034991-63097797	3	+	63034991	63034991	8553170	3	41,136,458,	0,17281,62348,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	63183100	63328094	chr13:63183100-63328094	3	-	63183100	63183100	789624	7	228,42,90,119,65,108,41,	0,11389,43878,48912,81110,144147,144953,
#Deleted in new
chr13	63742340	63742804	chr13:63742340-63742804	5	+	63742340	63742340	16724991	1	464,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	63746740	63748176	chr13:63746740-63748176	1	+	63746800	63747190	8553170	1	1436,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	63747998	63751080	chr13:63747998-63751080	2	+	63747998	63747998	8553170	2	399,377,	0,2705,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	63783800	63783904	chr13:63783800-63783904	3	+	63783800	63783800	8553170	1	104,	0,
#Deleted in new
chr13	63811013	63811608	chr13:63811013-63811608	7	-	63811013	63811013	16724991	1	595,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	63828839	63831852	chr13:63828839-63831852	5	-	63828839	63828839	16724991	2	313,399,	0,2614,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	63828846	63844125	chr13:63828846-63844125	7	-	63828846	63828846	16724991	6	306,74,156,76,101,812,	0,2607,10223,10902,12676,14467,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	63828846	63843441	chr13:63828846-63843441	4	-	63828846	63828846	16724991	5	306,74,156,1875,128,	0,2607,10223,10902,14467,
#Partially deleted in new
chr13	63832360	63833531	chr13:63832360-63833531	3	-	63832663	63832993	8553170	1	1171,	0,
#Deleted in new
chr13	63836993	63837456	chr13:63836993-63837456	5	-	63836993	63836993	16724991	1	463,	0,
#Deleted in new
chr13	63837294	63838031	chr13:63837294-63838031	4	-	63837294	63837294	16724991	1	737,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	63837294	63843424	chr13:63837294-63843424	4	-	63837294	63837294	16724991	6	148,79,156,76,101,111,	0,865,1775,2454,4228,6019,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	63851196	64076044	chr13:63851196-64076044	3	-	63851196	63851196	8553170	7	462,75,105,25,118,191,803,	0,2488,138899,151188,152151,183150,224045,
#Partially deleted in new
chr13	63975450	63976422	chr13:63975450-63976422	7	-	63975450	63975450	16724991	1	972,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	63986370	64076011	chr13:63986370-64076011	1	-	63986370	63986370	789624	6	669,105,25,118,191,770,	0,3725,16014,16977,47976,88871,
#Deleted in new
chr13	64958096	64959396	chr13:64958096-64959396	7	-	64958096	64958096	16724991	1	1300,	0,
#Partially deleted in new
chr13	65309854	65310953	chr13:65309854-65310953	7	-	65309854	65309854	16724991	2	667,202,	0,897,
#Deleted in new
chr13	65787931	65788764	chr13:65787931-65788764	7	-	65787931	65787931	16724991	1	833,	0,
#Partially deleted in new
chr13	65866173	65878219	chr13:65866173-65878219	3	+	65866173	65866173	789624	3	70,63,363,	0,9533,11683,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	65966329	65966429	chr13:65966329-65966429	3	-	65966329	65966329	5263520	1	100,	0,
#Partially deleted in new
chr13	66218249	66218324	chr13:66218249-66218324	3	+	66218249	66218249	5263520	1	75,	0,
#Deleted in new
chr13	66268996	66270458	chr13:66268996-66270458	7	+	66268996	66268996	16724991	1	1462,	0,
#Partially deleted in new
chr13	66302833	67229818	chr13:66302833-67229818	3	-	66304654	67228440	0	5	2195,202,102,3171,39,	0,328376,600670,922571,926946,
#Partially deleted in new
chr13	66302833	67230445	chr13:66302833-67230445	1	-	66304654	67228440	0	4	2195,202,3171,666,	0,328376,922571,926946,
#Partially deleted in new
chr13	66303344	67229818	chr13:66303344-67229818	1	-	66304654	67228440	789624	5	1684,76,102,3171,39,	0,327865,600159,922060,926435,
#Partially deleted in new
chr13	66303870	66323561	chr13:66303870-66323561	3	+	66303870	66303870	8553170	2	144,388,	0,19303,
#Deleted in new
chr13	66304603	66306309	chr13:66304603-66306309	0	-	66304603	66304603	8553170	2	425,134,	0,1572,
#Partially deleted in new
chr13	66304955	66903605	chr13:66304955-66903605	0	-	66782764	66903605	789624	4	73,202,84,102,	0,326254,477758,598548,
#Deleted in new
chr13	66630714	66630776	chr13:66630714-66630776	3	-	66630714	66630714	8553170	1	62,	0,
#Partially deleted in new
chr13	66825168	66915031	chr13:66825168-66915031	3	+	66825168	66825168	789624	6	68,133,76,77,89,95,	0,33819,51675,60831,89229,89768,
#Partially deleted in new
chr13	66880034	66886024	chr13:66880034-66886024	0	+	66880034	66880034	8553170	2	137,25,	0,5965,
#Partially deleted in new
chr13	66977431	66985776	chr13:66977431-66985776	3	+	66977431	66977431	789624	3	100,99,280,	0,941,8065,
#Partially deleted in new
chr13	66990885	67002007	chr13:66990885-67002007	3	+	66990885	66990885	789624	3	214,60,162,	0,5336,10960,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	67121080	67156624	chr13:67121080-67156624	3	+	67121080	67121080	8553170	3	48,70,634,	0,175,34910,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	67201014	67230445	chr13:67201014-67230445	1	-	67225341	67228440	789624	2	27561,666,	0,28765,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	67266844	67267706	chr13:67266844-67267706	7	-	67266844	67266844	16724991	1	862,	0,
#Deleted in new
chr13	67790406	67790794	chr13:67790406-67790794	7	+	67790406	67790406	16724991	1	388,	0,
#Deleted in new
chr13	67831875	67832827	chr13:67831875-67832827	7	-	67831875	67831875	16724991	1	952,	0,
#Deleted in new
chr13	67902207	67903221	chr13:67902207-67903221	7	+	67902207	67902207	16724991	1	1014,	0,
#Deleted in new
chr13	67910985	67911951	chr13:67910985-67911951	7	+	67910985	67910985	16724991	1	966,	0,
#Deleted in new
chr13	68289678	68291280	chr13:68289678-68291280	7	-	68289678	68289678	16724991	1	1602,	0,
#Partially deleted in new
chr13	68301604	68303302	chr13:68301604-68303302	7	-	68301604	68301604	16724991	2	629,298,	0,1400,
#Deleted in new
chr13	68331337	68331613	chr13:68331337-68331613	7	-	68331337	68331337	16724991	1	276,	0,
#Deleted in new
chr13	68634189	68634486	chr13:68634189-68634486	7	+	68634189	68634189	16724991	1	297,	0,
#Deleted in new
chr13	68654571	68655050	chr13:68654571-68655050	7	+	68654571	68654571	16724991	1	479,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	68693803	68694081	chr13:68693803-68694081	3	-	68693803	68693803	8553170	1	278,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	68861283	68885325	chr13:68861283-68885325	3	-	68861283	68861283	789624	3	3133,152,149,	0,8779,23893,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	68870928	68885313	chr13:68870928-68885313	0	-	68870928	68870928	8553170	2	180,137,	0,14248,
#Deleted in new
chr13	68985057	68986064	chr13:68985057-68986064	7	+	68985057	68985057	16724991	1	1007,	0,
#Deleted in new
chr13	69101831	69102056	chr13:69101831-69102056	7	-	69101831	69101831	16724991	1	225,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	69222323	69322190	chr13:69222323-69322190	3	+	69222323	69222323	789624	5	125,125,62,133,846,	0,52816,89011,89630,99021,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	69222345	69292154	chr13:69222345-69292154	1	+	69222345	69222345	8553170	4	103,61,125,528,	0,47545,52794,69281,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	69311332	69322101	chr13:69311332-69322101	0	+	69311332	69311332	8553170	2	64,757,	0,10012,
#Deleted in new
chr13	69408215	69408735	chr13:69408215-69408735	7	-	69408215	69408215	16724991	1	520,	0,
#Partially deleted in new
chr13	69700593	70108459	chr13:69700593-70108459	3	-	69701701	70107699	789624	11	1168,172,213,163,225,187,213,197,137,183,1257,	0,7031,18775,39800,96144,138382,181689,239446,260714,275026,406609,
#Partially deleted in new
chr13	69700593	70108493	chr13:69700593-70108493	1	-	69701701	70107699	789624	10	1168,172,213,163,225,187,213,197,137,1291,	0,7031,18775,39800,96144,138382,181689,239446,260714,406609,
#Deleted in new
chr13	69802939	69803041	chr13:69802939-69803041	3	+	69802939	69802939	8553170	1	102,	0,
#Deleted in new
chr13	69894100	69895085	chr13:69894100-69895085	7	-	69894100	69894100	16724991	1	985,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	70107212	70139429	chr13:70107212-70139429	3	+	70107212	70107212	789624	5	529,158,101,171,189,	0,7928,22571,23465,32028,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	70107911	70131546	chr13:70107911-70131546	1	+	70107911	70107911	8553170	4	108,158,101,869,	0,7229,21872,22766,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	70459463	70459570	chr13:70459463-70459570	3	+	70459463	70459463	8553170	1	107,	0,
#Deleted in new
chr13	70564266	70564437	chr13:70564266-70564437	7	-	70564266	70564266	16724991	1	171,	0,
#Deleted in new
chr13	70923663	70924455	chr13:70923663-70924455	7	+	70923663	70923663	16724991	1	792,	0,
#Deleted in new
chr13	71296209	71297235	chr13:71296209-71297235	7	+	71296209	71296209	16724991	1	1026,	0,
#Partially deleted in new
chr13	71437965	71867192	chr13:71437965-71867192	1	-	71440654	71866769	789624	8	2727,69,144,148,152,162,116,1271,	0,37175,37740,41203,51031,192590,243829,427956,
#Partially deleted in new
chr13	71437965	71867192	chr13:71437965-71867192	3	-	71440654	71866769	789624	11	2727,69,144,148,152,135,136,173,162,116,1271,	0,37175,37740,41203,51031,119058,121854,134874,192590,243829,427956,
#Partially deleted in new
chr13	71437965	71867192	chr13:71437965-71867192	1	-	71440654	71866769	789624	7	2727,69,144,148,152,116,1271,	0,37175,37740,41203,51031,243829,427956,
#Partially deleted in new
chr13	71439945	71866769	chr13:71439945-71866769	1	-	71440654	71866769	789624	12	747,69,144,148,152,135,136,173,156,162,116,848,	0,35195,35760,39223,49051,117078,119874,132894,133472,190610,241849,425976,
#Deleted in new
chr13	71675066	71675469	chr13:71675066-71675469	7	+	71675066	71675066	16724991	1	403,	0,
#Deleted in new
chr13	71704180	71704655	chr13:71704180-71704655	7	+	71704180	71704180	16724991	1	475,	0,
#Partially deleted in new
chr13	71845980	71846317	chr13:71845980-71846317	7	+	71845980	71845980	16724991	1	337,	0,
#Deleted in new
chr13	71913703	71914178	chr13:71913703-71914178	7	-	71913703	71913703	16724991	1	475,	0,
#Deleted in new
chr13	72453901	72453967	chr13:72453901-72453967	3	-	72453901	72453901	8553170	1	66,	0,
#Deleted in new
chr13	72460131	72460329	chr13:72460131-72460329	7	-	72460131	72460131	16724991	1	198,	0,
#Deleted in new
chr13	72460518	72460601	chr13:72460518-72460601	3	-	72460518	72460518	8553170	1	83,	0,
#Deleted in new
chr13	72567212	72567380	chr13:72567212-72567380	3	+	72567212	72567212	8553170	1	168,	0,
#Deleted in new
chr13	72586679	72586810	chr13:72586679-72586810	3	+	72586679	72586679	8553170	1	131,	0,
#Partially deleted in new
chr13	72703692	72704138	chr13:72703692-72704138	7	+	72703692	72703692	16724991	1	446,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	72706016	72706123	chr13:72706016-72706123	3	-	72706016	72706016	8553170	1	107,	0,
#Partially deleted in new
chr13	72708356	72727687	chr13:72708356-72727687	3	-	72710321	72727602	789624	3	1989,146,164,	0,10595,19167,
#Partially deleted in new
chr13	72727748	72756198	chr13:72727748-72756198	3	+	72727842	72755216	789624	12	259,168,107,46,82,66,57,227,133,611,132,1048,	0,1177,3532,7211,10213,15788,16756,17232,18195,18752,25941,27402,
#Partially deleted in new
chr13	72727751	72744547	chr13:72727751-72744547	0	+	72727842	72743548	789624	4	256,168,66,43,	0,1174,15785,16753,
#Partially deleted in new
chr13	72727903	72756198	chr13:72727903-72756198	1	+	72728050	72755216	789624	12	357,168,107,46,82,66,57,227,133,611,132,1048,	0,1022,3377,7056,10058,15633,16601,17077,18040,18597,25786,27247,
#Partially deleted in new
chr13	72727922	72745179	chr13:72727922-72745179	0	+	72727922	72745179	789624	7	85,107,46,82,66,57,199,	0,3358,7037,10039,15614,16582,17058,
#Partially deleted in new
chr13	72727922	72755216	chr13:72727922-72755216	1	+	72729043	72755216	789624	11	85,168,46,82,66,57,227,133,611,132,66,	0,1003,7037,10039,15614,16582,17058,18021,18578,25767,27228,
#Partially deleted in new
chr13	72727924	72745045	chr13:72727924-72745045	0	+	72727924	72727924	8553170	7	83,168,46,82,66,57,65,	0,1001,7035,10037,15612,16580,17056,
#Partially deleted in new
chr13	72727927	72745136	chr13:72727927-72745136	0	+	72727927	72727927	8553170	7	80,168,107,82,66,57,156,	0,998,3353,10034,15609,16577,17053,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr13	72752168	72781933	chr13:72752168-72781933	3	-	72759794	72781832	789624	21	7710,123,159,169,215,157,87,128,85,65,102,117,147,138,114,165,168,74,194,158,329,	0,8360,9194,9477,9754,11282,13803,16616,18735,18912,19626,19990,20524,21515,21777,23042,23756,25251,26018,28677,29436,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr13	72757442	72781925	chr13:72757442-72781925	1	-	72759794	72781832	789624	21	2436,123,159,169,215,157,87,128,85,65,102,117,147,138,114,165,168,74,194,68,321,	0,3086,3920,4203,4480,6008,8529,11342,13461,13638,14352,14716,15250,16241,16503,17768,18482,19977,20744,23846,24162,
#Partially deleted in new
chr13	72759043	72782096	chr13:72759043-72782096	1	-	72759794	72778280	789624	23	120,406,123,159,169,215,157,87,128,85,65,102,117,147,138,114,165,168,74,194,158,68,492,	0,429,1485,2319,2602,2879,4407,6928,9741,11860,12037,12751,13115,13649,14640,14902,16167,16881,18376,19143,21802,22245,22561,
#Partially deleted in new
chr13	72759674	72781854	chr13:72759674-72781854	0	-	72768902	72781832	789624	20	204,123,159,169,215,157,87,128,65,102,117,147,138,114,165,168,74,194,158,250,	0,854,1688,1971,2248,3776,6297,9110,11406,12120,12484,13018,14009,14271,15536,16250,17745,18512,21171,21930,
#Deleted in new
chr13	72780845	72782094	chr13:72780845-72782094	0	-	72780845	72780845	8553170	3	158,68,490,	0,443,759,
#Partially deleted in new
chr13	72782058	73016461	chr13:72782058-73016461	3	+	72783469	73015919	789624	18	291,299,101,199,120,134,109,182,126,99,166,151,91,103,131,85,174,593,	0,1364,10388,13300,15848,39790,44951,45674,53184,71998,111725,126472,135017,149106,183215,191532,216763,233810,
#Partially deleted in new
chr13	72782139	72974251	chr13:72782139-72974251	1	+	72783469	72973723	789624	16	210,299,101,199,120,134,109,182,126,99,166,151,91,103,131,661,	0,1283,10307,13219,15767,39709,44870,45593,53103,71917,111644,126391,134936,149025,183134,191451,
#Partially deleted in new
chr13	72782153	72798026	chr13:72782153-72798026	0	+	72782153	72782153	8553170	4	196,101,199,120,	0,10293,13205,15753,
#Partially deleted in new
chr13	72782224	73015980	chr13:72782224-73015980	1	+	72908665	73015919	789624	9	125,126,151,91,103,131,85,174,112,	0,53018,126306,134851,148940,183049,191366,216597,233644,
#Partially deleted in new
chr13	72797908	72835276	chr13:72797908-72835276	0	+	72797908	72797908	8553170	4	118,134,109,34,	0,23940,29101,37334,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	72881107	72881214	chr13:72881107-72881214	3	-	72881107	72881107	8553170	1	107,	0,
#Partially deleted in new
chr13	72884443	72893871	chr13:72884443-72893871	0	+	72884443	72884443	8553170	2	228,88,	0,9340,
#Partially deleted in new
chr13	72969602	73016061	chr13:72969602-73016061	0	+	72969602	72969602	8553170	5	24,156,85,174,193,	0,950,3988,29219,46266,
#Partially deleted in new
chr13	72969638	73016068	chr13:72969638-73016068	0	+	72969638	72969638	8553170	4	115,85,174,200,	0,3952,29183,46230,
#Partially deleted in new
chr13	73036400	73036848	chr13:73036400-73036848	7	+	73036400	73036400	16724991	1	448,	0,
#Deleted in new
chr13	73054975	73062661	chr13:73054975-73062661	0	+	73054975	73054975	8553170	2	183,801,	0,6885,
#Partially deleted in new
chr13	73054975	73077541	chr13:73054975-73077541	1	+	73061872	73075886	0	4	183,874,60,1834,	0,6885,8848,20732,
#Partially deleted in new
chr13	73058791	73077542	chr13:73058791-73077542	3	+	73059327	73075886	0	4	797,874,60,1835,	0,3069,5032,16916,
#Deleted in new
chr13	73060578	73062542	chr13:73060578-73062542	0	+	73060578	73060578	8553170	2	85,682,	0,1282,
#Deleted in new
chr13	73075014	73075778	chr13:73075014-73075778	0	+	73075014	73075014	8553170	2	59,71,	0,693,
#Partially deleted in new
chr13	73100574	73100985	chr13:73100574-73100985	7	-	73100574	73100574	16724991	1	411,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	73112914	73113018	chr13:73112914-73113018	3	-	73112914	73112914	8553170	1	104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	73191527	73191667	chr13:73191527-73191667	3	+	73191527	73191527	8553170	1	140,	0,
#Deleted in new
chr13	73399030	73399205	chr13:73399030-73399205	3	+	73399030	73399030	8553170	1	175,	0,
#Deleted in new
chr13	73407767	73408352	chr13:73407767-73408352	7	-	73407767	73407767	16724991	1	585,	0,
#Partially deleted in new
chr13	73413472	73546841	chr13:73413472-73546841	0	-	73413472	73413472	8553170	2	164,118,	0,133251,
#Partially deleted in new
chr13	73533758	73592265	chr13:73533758-73592265	1	-	73533758	73533758	8553170	6	805,24,118,156,85,201,	0,4971,12965,18114,30515,58306,
#Partially deleted in new
chr13	73536425	73661867	chr13:73536425-73661867	2	-	73536425	73536425	8553170	4	1096,203,193,50,	0,10046,56842,125392,
#Partially deleted in new
chr13	73536908	73661853	chr13:73536908-73661853	1	-	73536908	73536908	8553170	9	613,43,86,203,42,193,72,56,36,	0,1802,4466,9563,9891,56359,69379,111667,124909,
#Partially deleted in new
chr13	73545347	73661891	chr13:73545347-73661891	0	-	73545347	73545347	8553170	4	1327,42,56,74,	0,1452,103228,116470,
#Partially deleted in new
chr13	73545900	73574217	chr13:73545900-73574217	0	-	73545900	73545900	8553170	2	941,128,	0,28189,
#Partially deleted in new
chr13	73545900	73574295	chr13:73545900-73574295	1	-	73545900	73545900	8553170	4	774,42,126,206,	0,899,18262,28189,
#Partially deleted in new
chr13	73545908	73574260	chr13:73545908-73574260	0	-	73545908	73545908	8553170	3	766,42,171,	0,891,28181,
#Partially deleted in new
chr13	73546386	73648253	chr13:73546386-73648253	0	-	73546386	73546386	8553170	2	455,31,	0,101836,
#Partially deleted in new
chr13	73564243	73588070	chr13:73564243-73588070	3	+	73564243	73564243	789624	3	59,107,391,	0,23095,23436,
#Partially deleted in new
chr13	73593406	73661312	chr13:73593406-73661312	0	-	73593406	73593406	8553170	4	54,72,56,153,	0,12881,55169,67753,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	73686088	73995049	chr13:73686088-73995049	3	-	73695489	73995022	789624	7	9583,158,63,136,547,90,60,	0,29279,78849,127063,159738,257892,308901,
#Deleted in new
chr13	73800073	73802203	chr13:73800073-73802203	3	+	73800073	73800073	8553170	1	2130,	0,
#Partially deleted in new
chr13	73812872	73995056	chr13:73812872-73995056	0	-	73812872	73812872	8553170	4	415,547,90,67,	0,32954,131108,182117,
#Deleted in new
chr13	73844682	73845130	chr13:73844682-73845130	3	-	73844682	73844682	8553170	1	448,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	74231456	74259976	chr13:74231456-74259976	3	+	74231456	74231456	789624	2	296,3044,	0,25476,
#Partially deleted in new
chr13	74377162	74377951	chr13:74377162-74377951	7	-	74377162	74377162	16724991	2	125,356,	0,433,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	74412956	74419115	chr13:74412956-74419115	3	-	74412956	74412956	789624	2	1984,344,	0,5815,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	74419157	74444735	chr13:74419157-74444735	3	+	74419157	74419157	8553170	5	71,326,120,125,638,	0,6935,15345,24002,24940,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	74419172	74435159	chr13:74419172-74435159	0	+	74419172	74419172	789624	5	56,97,326,120,128,	0,270,6920,15330,15859,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	74434537	74555515	chr13:74434537-74555515	3	+	74434537	74434537	8553170	7	85,62,53,160,81,148,291,	0,109302,116642,118206,118630,120075,120687,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	74552502	74555461	chr13:74552502-74555461	0	+	74552502	74552502	8553170	4	401,81,104,237,	0,665,2154,2722,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	74552555	74557099	chr13:74552555-74557099	1	+	74552555	74552555	789624	3	348,148,1875,	0,2057,2669,
#Deleted in new
chr13	74552842	74555738	chr13:74552842-74555738	0	+	74552842	74552842	789624	3	61,104,514,	0,1814,2382,
#Deleted in new
chr13	74552842	74555353	chr13:74552842-74555353	0	+	74552842	74552842	8553170	2	61,741,	0,1770,
#Deleted in new
chr13	74553964	74555522	chr13:74553964-74555522	0	+	74553964	74553964	8553170	2	796,298,	0,1260,
#Deleted in new
chr13	74555332	74556330	chr13:74555332-74556330	0	+	74555332	74555332	8553170	2	310,497,	0,501,
#Partially deleted in new
chr13	74556535	74565445	chr13:74556535-74565445	3	+	74556535	74556535	8553170	3	528,63,277,	0,7613,8633,
#Partially deleted in new
chr13	74828552	74830080	chr13:74828552-74830080	7	+	74828552	74828552	16724991	1	1528,	0,
#Deleted in new
chr13	75136153	75136940	chr13:75136153-75136940	7	+	75136153	75136153	16724991	1	787,	0,
#Deleted in new
chr13	75237943	75240296	chr13:75237943-75240296	7	-	75237943	75237943	16724991	1	2353,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	75250479	75252012	chr13:75250479-75252012	3	+	75250479	75250479	8553170	2	122,265,	0,1268,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr13	75283502	75367015	chr13:75283502-75367015	1	-	75286791	75362562	8553170	20	3523,177,170,160,245,159,159,210,161,227,75,120,111,92,133,105,90,582,55,102,	0,5431,8599,11351,15827,18740,22810,26439,29235,42694,44249,53418,57622,57993,65667,72644,76266,78523,81098,83411,
#Partially deleted in new
chr13	75284664	75482114	chr13:75284664-75482114	1	-	75286791	75481767	0	19	2361,177,170,160,245,159,159,210,161,227,75,120,111,92,133,105,90,582,845,	0,4269,7437,10189,14665,17578,21648,25277,28073,41532,43087,52256,56460,56831,64505,71482,75104,77361,196605,
#Partially deleted in new
chr13	75284664	75482114	chr13:75284664-75482114	1	-	75286791	75481767	0	20	2361,177,170,160,245,159,159,210,161,165,227,75,120,111,92,133,105,90,582,845,	0,4269,7437,10189,14665,17578,21648,25277,28073,39572,41532,43087,52256,56460,56831,64505,71482,75104,77361,196605,
#Partially deleted in new
chr13	75284671	75482114	chr13:75284671-75482114	3	-	75286791	75481767	0	21	2354,177,170,160,245,159,159,210,161,24,165,227,75,120,111,92,133,105,90,582,845,	0,4262,7430,10182,14658,17571,21641,25270,28066,35342,39565,41525,43080,52249,56453,56824,64498,71475,75097,77354,196598,
#Partially deleted in new
chr13	75294864	75302821	chr13:75294864-75302821	0	-	75294864	75294864	8553170	4	149,245,159,206,	0,4465,7378,7751,
#Partially deleted in new
chr13	75306465	75316552	chr13:75306465-75316552	0	-	75306465	75306465	8553170	4	6,210,161,81,	0,3476,6272,10006,
#Partially deleted in new
chr13	75310034	75341531	chr13:75310034-75341531	0	-	75310034	75341531	789624	7	117,161,227,75,120,111,36,	0,2703,16162,17717,26886,31090,31461,
#Partially deleted in new
chr13	75312781	75326250	chr13:75312781-75326250	0	-	75312781	75312781	8553170	3	117,165,54,	0,11455,13415,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	75375510	75377294	chr13:75375510-75377294	3	-	75375510	75375510	8553170	3	178,209,38,	0,340,1746,
#Partially deleted in new
chr13	75525218	75538802	chr13:75525218-75538802	3	-	75526588	75537805	789624	5	1421,153,12,157,50,	0,4895,12445,12545,13534,
#Partially deleted in new
chr13	75525218	75537805	chr13:75525218-75537805	1	-	75526588	75537805	789624	4	1421,153,12,42,	0,4895,12445,12545,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	75526435	75537841	chr13:75526435-75537841	1	-	75526588	75537805	789624	5	204,39,153,12,78,	0,1377,3678,11228,11328,
#Partially deleted in new
chr13	75526435	75538802	chr13:75526435-75538802	0	-	75530204	75537805	789624	4	204,146,180,50,	0,3678,11305,12317,
#Partially deleted in new
chr13	75526435	75537618	chr13:75526435-75537618	1	-	75526588	75537480	789624	3	204,153,237,	0,3678,10946,
#Partially deleted in new
chr13	75526435	75549428	chr13:75526435-75549428	0	-	75526435	75526435	8553170	3	204,153,106,	0,3678,22887,
#Partially deleted in new
chr13	75526435	75530504	chr13:75526435-75530504	0	-	75526435	75526435	8553170	2	204,391,	0,3678,
#Partially deleted in new
chr13	75526435	75537826	chr13:75526435-75537826	0	-	75526435	75526435	8553170	4	204,95,12,63,	0,3875,11228,11328,
#Partially deleted in new
chr13	75526435	75537841	chr13:75526435-75537841	0	-	75526435	75526435	8553170	4	204,98,12,78,	0,3875,11228,11328,
#Partially deleted in new
chr13	75529708	75537844	chr13:75529708-75537844	0	-	75529708	75529708	8553170	3	697,12,81,	0,7955,8055,
#Partially deleted in new
chr13	75529823	75537841	chr13:75529823-75537841	0	-	75529823	75529823	8553170	3	443,12,78,	0,7840,7940,
#Partially deleted in new
chr13	75530113	75549439	chr13:75530113-75549439	0	-	75530113	75530113	8553170	3	153,177,117,	0,7385,19209,
#Partially deleted in new
chr13	75530204	75537805	chr13:75530204-75537805	1	-	75530204	75537805	789624	2	55,65,	0,7536,
#Partially deleted in new
chr13	75549479	75606020	chr13:75549479-75606020	1	+	75560806	75605812	789624	8	203,129,157,86,48,76,59,292,	0,11273,17215,17747,19980,45435,55289,56249,
#Partially deleted in new
chr13	75549482	75594990	chr13:75549482-75594990	0	+	75549482	75549482	8553170	7	188,12,129,157,86,48,76,	0,493,11270,17212,17744,19977,45432,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr13	75549772	75807120	chr13:75549772-75807120	3	+	75549772	75549772	8553170	15	90,12,129,157,86,48,76,106,71,70,107,31,114,199,2832,	0,203,10980,16922,17454,19687,45142,71990,163409,177256,211159,245628,246863,250911,254516,
#Partially deleted in new
chr13	75549790	75605933	chr13:75549790-75605933	3	+	75549820	75605812	0	9	72,12,129,157,86,48,76,59,205,	0,185,10962,16904,17436,19669,45124,54978,55938,
#Partially deleted in new
chr13	75566709	75605949	chr13:75566709-75605949	0	+	75566709	75605812	789624	7	142,86,48,192,76,59,221,	0,517,2750,23228,28205,38059,39019,
#Partially deleted in new
chr13	75566831	75623320	chr13:75566831-75623320	0	+	75566831	75566831	8553170	6	20,86,48,76,106,50,	0,395,2628,28083,54931,56439,
#Partially deleted in new
chr13	75569122	75605930	chr13:75569122-75605930	0	+	75569122	75569122	8553170	4	385,76,59,202,	0,25792,35646,36606,
#Partially deleted in new
chr13	75604526	75605933	chr13:75604526-75605933	0	+	75604526	75604526	8553170	2	301,205,	0,1202,
#Partially deleted in new
chr13	75604699	75635994	chr13:75604699-75635994	0	-	75604699	75604699	789624	3	246,137,166,	0,14070,31129,
#Partially deleted in new
chr13	75604825	75635994	chr13:75604825-75635994	3	-	75604825	75604825	789624	4	120,137,44,166,	0,13944,17434,31003,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr13	75620433	75859870	chr13:75620433-75859870	3	+	75621693	75857943	789624	30	1435,50,71,70,107,31,114,199,253,30,118,143,433,309,115,162,107,61,57,26,105,93,356,66,53,214,297,109,103,1950,	0,2837,92748,106595,140498,174967,176202,180250,183855,188720,196727,198959,200743,203131,212617,213792,214799,215963,217706,219651,219957,220675,221194,222417,224893,228645,232658,234826,236072,237487,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr13	75620433	75859868	chr13:75620433-75859868	1	+	75621738	75857943	789624	32	1435,50,71,70,107,31,114,199,253,282,720,30,118,143,433,309,115,162,107,61,57,26,105,93,356,66,53,214,297,109,103,1948,	0,2837,92748,106595,140498,174967,176202,180250,183855,185045,187046,188720,196727,198959,200743,203131,212617,213792,214799,215963,217706,219651,219957,220675,221194,222417,224893,228645,232658,234826,236072,237487,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	75623269	75628564	chr13:75623269-75628564	0	+	75623269	75623269	8553170	2	51,1794,	0,3501,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	75631270	75632135	chr13:75631270-75632135	3	+	75631270	75631270	8553170	1	865,	0,
#Partially deleted in new
chr13	75635809	75804335	chr13:75635809-75804335	0	+	75635809	75635809	8553170	8	81,71,70,107,31,114,199,47,	0,77372,91219,125122,159591,160826,164874,168479,
#Partially deleted in new
chr13	75636322	75845368	chr13:75636322-75845368	0	+	75636657	75845368	789624	24	404,71,70,107,31,114,199,253,30,118,143,433,309,115,162,107,61,57,26,105,93,356,66,42,	0,76859,90706,124609,159078,160313,164361,167966,172831,180838,183070,184854,187242,196728,197903,198910,200074,201817,203762,204068,204786,205305,206528,209004,
#Partially deleted in new
chr13	75636657	75857943	chr13:75636657-75857943	1	+	75636657	75857943	789624	31	69,71,70,107,31,114,199,253,282,720,30,118,143,433,309,115,162,107,61,57,26,105,93,356,66,53,214,297,109,103,23,	0,76524,90371,124274,158743,159978,164026,167631,168821,170822,172496,180503,182735,184519,186907,196393,197568,198575,199739,201482,203427,203733,204451,204970,206193,208669,212421,216434,218602,219848,221263,
#Deleted in new
chr13	75688555	75689197	chr13:75688555-75689197	7	-	75688555	75688555	16724991	1	642,	0,
#Partially deleted in new
chr13	75760366	75804363	chr13:75760366-75804363	0	+	75804326	75804363	789624	6	63,107,31,114,199,75,	0,565,35034,36269,40317,43922,
#Partially deleted in new
chr13	75760433	75858672	chr13:75760433-75858672	1	+	75804326	75857943	789624	29	232,107,31,114,199,253,282,720,30,118,143,433,309,115,162,107,61,57,26,105,93,356,66,53,214,297,109,103,752,	0,498,34967,36202,40250,43855,45045,47046,48720,56727,58959,60743,63131,72617,73792,74799,75963,77706,79651,79957,80675,81194,82417,84893,88645,92658,94826,96072,97487,
#Partially deleted in new
chr13	75760452	75804302	chr13:75760452-75804302	0	+	75760452	75760452	8553170	6	107,107,31,114,199,14,	0,479,34948,36183,40231,43836,
#Partially deleted in new
chr13	75760658	75858156	chr13:75760658-75858156	1	+	75760738	75857943	789624	26	173,107,31,114,199,253,118,143,433,309,115,162,188,61,57,26,105,93,356,66,53,214,297,109,103,236,	0,273,34742,35977,40025,43630,56502,58734,60518,62906,72392,73567,74493,75738,77481,79426,79732,80450,80969,82192,84668,88420,92433,94601,95847,97262,
#Partially deleted in new
chr13	75760660	75858675	chr13:75760660-75858675	1	+	75804326	75858013	789624	27	378,31,114,199,253,282,720,30,118,143,433,309,115,162,107,61,57,26,105,93,356,66,53,214,297,103,755,	0,34740,35975,40023,43628,44818,46819,48493,56500,58732,60516,62904,72390,73565,74572,75736,77479,79424,79730,80448,80967,82190,84666,88418,92431,95845,97260,
#Partially deleted in new
chr13	75788837	75817278	chr13:75788837-75817278	0	+	75804326	75817278	789624	7	250,31,114,199,253,30,118,	0,6563,7798,11846,15451,20316,28323,
#Deleted in new
chr13	75804173	75805760	chr13:75804173-75805760	0	+	75804326	75805760	789624	2	368,282,	0,1305,
#Partially deleted in new
chr13	75804177	75807687	chr13:75804177-75807687	0	+	75804326	75807687	789624	2	364,208,	0,3302,
#Partially deleted in new
chr13	75804226	75819526	chr13:75804226-75819526	0	+	75804326	75819526	789624	4	315,30,118,134,	0,4927,12934,15166,
#Partially deleted in new
chr13	75804229	75821275	chr13:75804229-75821275	0	+	75804326	75821275	789624	4	312,118,143,99,	0,12931,15163,16947,
#Partially deleted in new
chr13	75804319	75845368	chr13:75804319-75845368	0	+	75804319	75845368	789624	18	222,720,30,118,143,433,309,115,162,107,61,57,26,105,93,356,66,42,	0,3160,4834,12841,15073,16857,19245,28731,29906,30913,32077,33820,35765,36071,36789,37308,38531,41007,
#Deleted in new
chr13	75816785	75819498	chr13:75816785-75819498	0	+	75816785	75816785	8553170	2	493,106,	0,2607,
#Partially deleted in new
chr13	75819277	75821513	chr13:75819277-75821513	0	+	75819277	75819277	8553170	2	258,337,	0,1899,
#Partially deleted in new
chr13	75823625	75838452	chr13:75823625-75838452	0	+	75823625	75823625	8553170	6	248,115,162,188,61,313,	0,9425,10600,11526,12771,14514,
#Partially deleted in new
chr13	75823709	75841201	chr13:75823709-75841201	0	+	75823709	75841201	789624	8	164,115,162,188,61,26,105,93,	0,9341,10516,11442,12687,16375,16681,17399,
#Deleted in new
chr13	75833084	75840110	chr13:75833084-75840110	0	+	75833084	75840110	789624	7	81,162,107,61,57,42,26,	0,1141,2148,3312,5055,5262,7000,
#Deleted in new
chr13	75834298	75842887	chr13:75834298-75842887	0	+	75834298	75842887	789624	8	89,107,61,26,105,93,356,37,	0,934,2098,5786,6092,6810,7329,8552,
#Deleted in new
chr13	75839715	75841186	chr13:75839715-75841186	0	+	75839996	75841186	789624	3	395,105,78,	0,675,1393,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	75848975	75856717	chr13:75848975-75856717	0	+	75848975	75848975	8553170	4	317,297,109,212,	0,4116,6284,7530,
#Deleted in new
chr13	75854948	75856676	chr13:75854948-75856676	0	+	75854948	75854948	8553170	2	420,171,	0,1557,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	75856636	75858675	chr13:75856636-75858675	0	+	75856636	75856636	8553170	1	2039,	0,
#Deleted in new
chr13	75876885	75881127	chr13:75876885-75881127	3	+	75876885	75876885	789624	4	80,80,79,82,	0,1829,2818,4160,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	75932394	75935132	chr13:75932394-75935132	3	-	75932394	75932394	789624	1	2738,	0,
#Partially deleted in new
chr13	76013022	76014501	chr13:76013022-76014501	3	-	76013022	76013022	8553170	2	134,143,	0,1336,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	76134930	76135225	chr13:76134930-76135225	3	+	76134930	76134930	8553170	1	295,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	76552806	76846524	chr13:76552806-76846524	3	-	76552806	76552806	8553170	5	1259,118,166,105,124,	0,1895,176538,283174,293594,
#Partially deleted in new
chr13	76833838	76846594	chr13:76833838-76846594	3	+	76833838	76833838	8553170	4	115,87,169,221,	0,551,1731,12535,
#Deleted in new
chr13	76880165	76886390	chr13:76880165-76886390	3	-	76885170	76886148	789624	1	6225,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	76887550	76891135	chr13:76887550-76891135	3	+	76887550	76887550	8553170	1	3585,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	76928065	76928836	chr13:76928065-76928836	7	+	76928065	76928065	16724991	2	96,381,	0,390,
#Partially deleted in new
chr13	76948496	76958642	chr13:76948496-76958642	3	+	76948558	76957985	789624	5	74,162,90,206,1633,	0,3992,5103,6822,8513,
#Partially deleted in new
chr13	76952476	76958636	chr13:76952476-76958636	1	+	76952476	76957985	789624	4	174,90,206,1627,	0,1123,2842,4533,
#Deleted in new
chr13	76981174	76981916	chr13:76981174-76981916	7	-	76981174	76981174	16724991	1	742,	0,
#Deleted in new
chr13	76984867	76987943	chr13:76984867-76987943	7	+	76984867	76984867	16724991	1	3076,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	76990659	77005117	chr13:76990659-77005117	3	+	76991951	77000969	789624	4	1612,166,226,4660,	0,4403,5242,9798,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	76992058	76997863	chr13:76992058-76997863	0	+	76992058	76996138	789624	3	213,166,1962,	0,3004,3843,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	76992077	76999976	chr13:76992077-76999976	0	+	76992077	76998071	789624	4	194,166,226,1934,	0,2985,3824,5965,
#Partially deleted in new
chr13	76992077	77078025	chr13:76992077-77078025	2	+	76992077	77075558	789624	5	194,166,226,67,1210,	0,2985,3824,83440,84738,
#Partially deleted in new
chr13	76992083	77002506	chr13:76992083-77002506	1	+	76992098	77000969	789624	4	188,166,226,2049,	0,2979,3818,8374,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	76992086	77017131	chr13:76992086-77017131	0	+	76992086	77012905	789624	5	185,166,226,152,4331,	0,2976,3815,16657,20714,
#Deleted in new
chr13	76992088	76996099	chr13:76992088-76996099	0	+	76992088	76992088	8553170	4	183,166,57,198,	0,2974,3368,3813,
#Partially deleted in new
chr13	76992090	77002345	chr13:76992090-77002345	0	+	76992090	76999988	789624	5	181,166,226,66,1888,	0,2972,3811,7839,8367,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	76992095	77019143	chr13:76992095-77019143	0	+	76992095	77017145	789624	6	176,166,226,152,128,1660,	0,2967,3806,16648,24954,25388,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	76992097	77010968	chr13:76992097-77010968	0	+	76992097	76992097	8553170	4	174,166,226,2225,	0,2965,3804,16646,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	76992097	77018366	chr13:76992097-77018366	0	+	76992097	77016746	789624	5	174,166,226,152,1650,	0,2965,3804,16646,24619,
#Partially deleted in new
chr13	76992159	77002411	chr13:76992159-77002411	0	+	76992159	76995941	789624	4	112,166,285,1954,	0,2903,3683,8298,
#Deleted in new
chr13	76992356	76994867	chr13:76992356-76994867	0	+	76992356	76992356	8553170	1	2511,	0,
#Partially deleted in new
chr13	76992384	77001331	chr13:76992384-77001331	0	+	76995144	76995483	789624	5	468,166,57,226,874,	0,2678,3072,3517,8073,
#Partially deleted in new
chr13	76992572	77002464	chr13:76992572-77002464	0	+	76992572	77000969	789624	4	9,166,226,2007,	0,2490,3329,7885,
#Partially deleted in new
chr13	76992597	77015581	chr13:76992597-77015581	0	-	76992597	76992597	8553170	2	354,173,	0,22811,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	76994050	76999939	chr13:76994050-76999939	0	+	76994050	76994050	8553170	1	5889,	0,
#Deleted in new
chr13	76995228	76996277	chr13:76995228-76996277	0	+	76995228	76995228	8553170	2	285,376,	0,673,
#Partially deleted in new
chr13	76995236	77002429	chr13:76995236-77002429	0	+	76995236	76995236	8553170	2	891,1972,	0,5221,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	76995914	77129589	chr13:76995914-77129589	0	+	76995914	77109661	789624	3	213,455,443,	0,113733,133232,
#Partially deleted in new
chr13	76995953	77076198	chr13:76995953-77076198	0	+	76995953	77075558	789624	2	174,681,	0,79564,
#Partially deleted in new
chr13	76995958	77100400	chr13:76995958-77100400	1	+	76995958	77097983	789624	2	169,2476,	0,101966,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	76999136	77018686	chr13:76999136-77018686	0	-	76999136	76999136	8553170	3	2913,172,87,	0,16272,19463,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	76999781	77000383	chr13:76999781-77000383	0	+	76999781	76999781	8553170	2	365,184,	0,418,
#Partially deleted in new
chr13	77005253	77027150	chr13:77005253-77027150	3	-	77007144	77021860	0	5	2535,172,123,349,324,	0,10155,13346,16259,21573,
#Partially deleted in new
chr13	77007564	77027195	chr13:77007564-77027195	0	-	77007564	77021860	789624	5	224,172,123,205,369,	0,7844,11035,14092,19262,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	77008601	77077178	chr13:77008601-77077178	0	+	77008601	77008601	8553170	3	294,67,363,	0,66916,68214,
#Partially deleted in new
chr13	77015164	77018744	chr13:77015164-77018744	0	-	77015164	77015164	8553170	2	416,145,	0,3435,
#Partially deleted in new
chr13	77015510	77027085	chr13:77015510-77027085	0	-	77015510	77015510	8553170	2	70,259,	0,11316,
#Partially deleted in new
chr13	77026766	77077951	chr13:77026766-77077951	2	+	77026766	77026766	8553170	3	356,67,1136,	0,48751,50049,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	77027943	77028482	chr13:77027943-77028482	3	+	77027943	77027943	8553170	1	539,	0,
#Partially deleted in new
chr13	77044654	77326679	chr13:77044654-77326679	1	-	77045377	77326661	789624	83	839,166,108,210,108,189,104,133,129,102,120,97,284,267,81,99,240,66,225,157,161,150,200,158,168,245,170,1644,123,133,225,141,117,98,116,56,216,145,173,50,88,119,226,219,101,143,179,132,207,192,222,275,193,97,84,135,92,128,126,173,154,205,118,82,120,108,102,146,205,159,165,205,77,139,74,97,72,243,197,154,216,76,206,	0,6342,7156,10903,12331,13563,14868,16514,17007,17941,19960,21337,22926,23910,25976,32096,32493,34169,36772,37182,38377,42829,44177,45451,48510,50703,51657,52715,76718,80681,81663,94541,95392,96191,99790,101507,106079,111403,113282,117251,119799,120618,121674,123773,124959,126837,129656,131842,133093,135472,137046,140448,141216,144296,145597,147024,149498,160601,160818,161998,166512,167301,173185,179796,180780,188501,198404,199151,206496,213016,215773,216516,217398,218996,219274,223186,225337,225641,228817,234103,243506,251944,281819,
#Partially deleted in new
chr13	77044657	77327044	chr13:77044657-77327044	3	-	77045377	77326661	789624	84	836,166,108,210,108,189,104,133,129,102,120,97,284,267,81,99,240,66,225,157,161,150,200,158,168,245,170,1644,123,133,225,141,117,98,116,56,216,145,173,50,88,119,226,219,101,143,179,132,207,192,222,275,193,97,84,135,92,128,126,173,154,205,118,82,120,108,102,146,205,159,165,205,77,139,74,97,72,243,197,154,216,76,206,75,	0,6339,7153,10900,12328,13560,14865,16511,17004,17938,19957,21334,22923,23907,25973,32093,32490,34166,36769,37179,38374,42826,44174,45448,48507,50700,51654,52712,76715,80678,81660,94538,95389,96188,99787,101504,106076,111400,113279,117248,119796,120615,121671,123770,124956,126834,129653,131839,133090,135469,137043,140445,141213,144293,145594,147021,149495,160598,160815,161995,166509,167298,173182,179793,180777,188498,198401,199148,206493,213013,215770,216513,217395,218993,219271,223183,225334,225638,228814,234100,243503,251941,281816,282312,
#Partially deleted in new
chr13	77044659	77058334	chr13:77044659-77058334	1	-	77045307	77058268	789624	7	738,95,166,108,210,108,117,	0,739,6337,7151,10898,12326,13558,
#Partially deleted in new
chr13	77044901	77087514	chr13:77044901-77087514	0	-	77045377	77087514	789624	22	592,166,108,210,108,189,104,133,129,102,120,97,284,267,81,90,240,66,225,157,161,31,	0,6095,6909,10656,12084,13316,14621,16267,16760,17694,19713,21090,22679,23663,25729,31858,32246,33922,36525,36935,38130,42582,
#Partially deleted in new
chr13	77075513	77087778	chr13:77075513-77087778	1	+	77075513	77075513	789624	4	71,118,103,227,	0,1302,7496,12038,
#Partially deleted in new
chr13	77075513	77087778	chr13:77075513-77087778	1	+	77075513	77075513	8553170	3	71,51,227,	0,1302,12038,
#Partially deleted in new
chr13	77075517	77087699	chr13:77075517-77087699	1	+	77075517	77075517	8553170	3	67,118,148,	0,1298,12034,
#Partially deleted in new
chr13	77075536	77098542	chr13:77075536-77098542	0	+	77075536	77075536	8553170	3	48,51,618,	0,1279,22388,
#Deleted in new
chr13	77075537	77077602	chr13:77075537-77077602	0	+	77075537	77075537	8553170	2	47,787,	0,1278,
#Partially deleted in new
chr13	77076902	77129717	chr13:77076902-77129717	0	+	77076902	77076902	8553170	2	31,571,	0,52244,
#Partially deleted in new
chr13	77076902	77090662	chr13:77076902-77090662	0	+	77076902	77076902	8553170	2	31,527,	0,13233,
#Partially deleted in new
chr13	77076902	77082186	chr13:77076902-77082186	1	+	77076902	77076902	8553170	2	31,381,	0,4903,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	77080510	77081190	chr13:77080510-77081190	3	-	77080510	77080510	8553170	2	151,277,	0,403,
#Deleted in new
chr13	77093285	77097646	chr13:77093285-77097646	0	-	77093285	77093285	8553170	4	47,72,170,277,	0,2245,3026,4084,
#Partially deleted in new
chr13	77098067	77126516	chr13:77098067-77126516	0	-	77098067	77098067	8553170	5	946,180,123,133,199,	0,20272,23305,27268,28250,
#Partially deleted in new
chr13	77098775	77118462	chr13:77098775-77118462	0	-	77098775	77098775	8553170	3	238,102,123,	0,4433,19564,
#Partially deleted in new
chr13	77098884	77140943	chr13:77098884-77140943	0	-	77098884	77098884	8553170	8	129,123,133,225,75,141,117,98,	0,22488,26451,27433,30271,40311,41162,41961,
#Partially deleted in new
chr13	77121224	77125428	chr13:77121224-77125428	0	-	77121337	77125428	789624	2	271,93,	0,4111,
#Partially deleted in new
chr13	77144116	77150778	chr13:77144116-77150778	0	-	77144116	77144116	8553170	3	444,56,45,	0,2045,6617,
#Partially deleted in new
chr13	77270030	77273511	chr13:77270030-77273511	0	-	77270030	77270030	8553170	4	33,243,77,40,	0,265,2292,3441,
#Partially deleted in new
chr13	77296602	77327050	chr13:77296602-77327050	0	-	77296602	77296602	8553170	2	72,577,	0,29871,
#Partially deleted in new
chr13	77535673	77645259	chr13:77535673-77645259	1	+	77555875	77644274	789624	31	151,62,118,60,69,69,39,81,81,66,60,45,60,60,60,60,60,60,60,60,51,63,60,60,57,63,72,75,109,103,1002,	0,20183,20922,24130,28157,32006,32621,33697,53470,55721,57840,61871,63655,64015,66391,66980,67402,72382,73384,74373,77217,78219,81925,82129,82330,92273,98705,101446,105002,107032,108584,
#Partially deleted in new
chr13	77535723	77612940	chr13:77535723-77612940	0	+	77555875	77602128	789624	19	101,62,118,60,69,39,81,66,81,66,45,60,60,1071,60,60,60,60,50,	0,20133,20872,24080,28107,32571,33647,36400,53420,55671,61821,63605,63965,66341,68632,72332,73334,74323,77167,
#Partially deleted in new
chr13	77535758	77645263	chr13:77535758-77645263	1	+	77555875	77644274	789624	32	66,62,118,60,69,69,39,81,66,81,66,45,60,60,60,60,60,60,60,60,60,51,63,60,60,57,63,72,75,109,103,1006,	0,20098,20837,24045,28072,31921,32536,33612,36365,53385,55636,61786,63570,63930,66306,66895,67317,68597,72297,73299,74288,77132,78134,81840,82044,82245,92188,98620,101361,104917,106947,108499,
#Partially deleted in new
chr13	77535759	77644509	chr13:77535759-77644509	3	+	77555875	77644274	789624	33	65,62,118,60,69,69,39,81,66,81,66,60,45,60,60,60,60,60,60,60,60,60,51,63,60,60,57,63,72,75,109,103,252,	0,20097,20836,24044,28071,31920,32535,33611,36364,53384,55635,57754,61785,63569,63929,66305,66894,67316,68596,72296,73298,74287,77131,78133,81839,82043,82244,92187,98619,101360,104916,106946,108498,
#Partially deleted in new
chr13	77597027	77617641	chr13:77597027-77617641	0	+	77597027	77597027	8553170	10	88,45,60,60,60,60,60,51,63,43,	0,517,2661,5037,11028,12030,13019,15863,16865,20571,
#Partially deleted in new
chr13	77599754	77606551	chr13:77599754-77606551	0	-	77599754	77599754	789624	3	266,109,75,	0,2387,6722,
#Partially deleted in new
chr13	77599796	77606516	chr13:77599796-77606516	3	-	77599796	77599796	789624	4	224,109,120,40,	0,2345,4474,6680,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	77623371	77623472	chr13:77623371-77623472	3	+	77623371	77623371	8553170	1	101,	0,
#Deleted in new
chr13	77659412	77659664	chr13:77659412-77659664	7	+	77659412	77659412	16724991	1	252,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	77661375	77662626	chr13:77661375-77662626	7	-	77661375	77661375	16724991	1	1251,	0,
#Partially deleted in new
chr13	77697853	77764242	chr13:77697853-77764242	1	+	77697913	77763220	789624	7	686,140,150,342,156,283,1098,	0,21678,46429,48660,55349,62974,65291,
#Partially deleted in new
chr13	77697887	77746654	chr13:77697887-77746654	0	+	77719628	77746654	789624	4	41,140,150,141,	0,21644,46395,48626,
#Partially deleted in new
chr13	77697887	77764124	chr13:77697887-77764124	1	+	77697913	77763220	789624	8	316,270,140,150,342,156,283,980,	0,382,21644,46395,48626,55315,62940,65257,
#Deleted in new
chr13	77698011	77698116	chr13:77698011-77698116	3	-	77698011	77698011	5263520	1	105,	0,
#Partially deleted in new
chr13	77698422	77753282	chr13:77698422-77753282	0	+	77719628	77753282	789624	5	117,140,150,342,80,	0,21109,45860,48091,54780,
#Partially deleted in new
chr13	77698422	77746855	chr13:77698422-77746855	0	+	77719628	77746855	789624	5	117,140,150,150,342,	0,21109,44593,45860,48091,
#Partially deleted in new
chr13	77698880	77763357	chr13:77698880-77763357	1	+	77698923	77763220	789624	7	177,140,150,342,156,283,213,	0,20651,45402,47633,54322,61947,64264,
#Partially deleted in new
chr13	77698881	77744372	chr13:77698881-77744372	0	+	77699215	77744372	789624	3	342,140,90,	0,20650,45401,
#Partially deleted in new
chr13	77719597	77764229	chr13:77719597-77764229	1	+	77719628	77763220	789624	6	74,150,342,156,283,1085,	0,24685,26916,33605,41230,43547,
#Partially deleted in new
chr13	77741159	77764242	chr13:77741159-77764242	1	+	77744371	77763220	789624	6	281,150,150,156,283,1098,	0,1856,3123,12043,19668,21985,
#Partially deleted in new
chr13	77741159	77764242	chr13:77741159-77764242	1	+	77744458	77763220	789624	6	281,234,342,156,283,1098,	0,3123,5354,12043,19668,21985,
#Partially deleted in new
chr13	77741199	77746807	chr13:77741199-77746807	0	+	77741199	77741199	8553170	3	241,234,294,	0,3083,5314,
#Partially deleted in new
chr13	77741218	77760990	chr13:77741218-77760990	0	+	77744371	77760990	789624	5	222,150,342,156,163,	0,3064,5295,11984,19609,
#Partially deleted in new
chr13	77741355	77746750	chr13:77741355-77746750	0	+	77744371	77746750	789624	4	85,150,150,237,	0,1660,2927,5158,
#Partially deleted in new
chr13	77741537	77746858	chr13:77741537-77746858	0	+	77744371	77746858	789624	3	81,150,345,	0,2745,4976,
#Partially deleted in new
chr13	77742748	77753241	chr13:77742748-77753241	0	+	77744371	77753241	789624	4	39,150,342,39,	0,1534,3765,10454,
#Deleted in new
chr13	77743056	77744407	chr13:77743056-77744407	0	+	77744371	77744407	789624	2	406,125,	0,1226,
#Partially deleted in new
chr13	77743104	77764227	chr13:77743104-77764227	3	+	77744371	77763220	789624	6	61,150,342,156,283,1083,	0,1178,3409,10098,17723,20040,
#Partially deleted in new
chr13	77828221	77833950	chr13:77828221-77833950	3	+	77828221	77828221	8553170	5	194,75,51,63,218,	0,806,2331,5143,5511,
#Partially deleted in new
chr13	77895480	77919768	chr13:77895480-77919768	1	-	77898199	77919615	0	8	2854,109,134,150,205,113,534,372,	0,4378,5040,5577,7675,8014,22610,23916,
#Partially deleted in new
chr13	77895486	77918830	chr13:77895486-77918830	1	-	77898199	77918573	0	7	2848,109,134,150,205,113,740,	0,4372,5034,5571,7669,8008,22604,
#Partially deleted in new
chr13	77895488	77918810	chr13:77895488-77918810	1	-	77898199	77918573	0	7	2846,109,134,150,205,113,720,	0,4370,5032,5569,7667,8006,22602,
#Partially deleted in new
chr13	77895525	77919397	chr13:77895525-77919397	1	-	77898199	77918573	0	8	2809,109,134,150,205,113,534,391,	0,4333,4995,5532,7630,7969,22565,23481,
#Partially deleted in new
chr13	77896407	77918799	chr13:77896407-77918799	1	-	77896441	77918573	0	7	151,109,134,150,205,113,709,	0,3451,4113,4650,6748,7087,21683,
#Partially deleted in new
chr13	77897349	77919390	chr13:77897349-77919390	1	-	77898199	77918573	0	8	985,109,134,150,205,113,534,325,	0,2509,3171,3708,5806,6145,20741,21716,
#Partially deleted in new
chr13	77898191	77903568	chr13:77898191-77903568	0	-	77899907	77903568	789624	5	143,109,150,205,74,	0,1667,2866,4964,5303,
#Partially deleted in new
chr13	77899501	77919483	chr13:77899501-77919483	1	-	77899822	77918573	789624	7	466,134,150,205,113,534,87,	0,1019,1556,3654,3993,18589,19895,
#Partially deleted in new
chr13	77919688	78584162	chr13:77919688-78584162	3	+	77919688	77919688	8553170	3	230,85,5686,	0,354564,658788,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	77939161	77944874	chr13:77939161-77944874	3	-	77939161	77939161	8553170	2	832,70,	0,5643,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	77947496	77947772	chr13:77947496-77947772	3	-	77947496	77947496	8553170	1	276,	0,
#Deleted in new
chr13	77989371	77990646	chr13:77989371-77990646	3	-	77989371	77989371	8553170	2	237,309,	0,966,
#Partially deleted in new
chr13	78012882	78037219	chr13:78012882-78037219	3	+	78012882	78012882	789624	5	65,89,159,122,24,	0,792,17039,18980,24313,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	78030935	78053595	chr13:78030935-78053595	1	+	78030935	78030935	8553170	4	62,122,55,118,	0,927,6260,22542,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	78054844	78578714	chr13:78054844-78578714	1	+	78054844	78054844	8553170	5	220,89,85,160,238,	0,134763,219408,308727,523632,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	78054846	78363731	chr13:78054846-78363731	0	+	78054846	78054846	8553170	3	218,85,160,	0,219406,308725,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	78054854	78607016	chr13:78054854-78607016	0	+	78054854	78054854	8553170	5	210,89,85,144,45,	0,134753,219398,550446,552117,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	78054854	78617325	chr13:78054854-78617325	1	+	78054854	78054854	789624	6	210,89,85,144,239,1651,	0,134753,219398,550446,552117,560820,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	78054854	78607006	chr13:78054854-78607006	0	+	78054854	78054854	8553170	4	210,187,144,35,	0,523622,550446,552117,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	78054867	78605378	chr13:78054867-78605378	1	+	78054867	78054867	8553170	5	197,128,89,85,78,	0,133441,134740,219385,550433,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	78054988	78607082	chr13:78054988-78607082	0	+	78054988	78054988	8553170	4	76,160,144,111,	0,308583,550312,551983,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	78054996	78605354	chr13:78054996-78605354	0	+	78054996	78054996	8553170	5	68,89,85,187,54,	0,134611,219256,523480,550304,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	78054996	78615962	chr13:78054996-78615962	0	+	78054996	78054996	8553170	4	68,85,144,288,	0,219256,550304,560678,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	78054996	78605557	chr13:78054996-78605557	0	+	78054996	78054996	8553170	4	68,85,160,257,	0,219256,308575,550304,
#Partially deleted in new
chr13	78275719	78277514	chr13:78275719-78277514	3	-	78275719	78275719	8553170	2	147,195,	0,1600,
#Deleted in new
chr13	78285837	78286288	chr13:78285837-78286288	7	+	78285837	78285837	16724991	1	451,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	78355226	78355328	chr13:78355226-78355328	3	-	78355226	78355226	8553170	1	102,	0,
#Deleted in new
chr13	78422822	78423192	chr13:78422822-78423192	7	+	78422822	78422822	16724991	1	370,	0,
#Deleted in new
chr13	78488181	78488513	chr13:78488181-78488513	7	+	78488181	78488181	16724991	1	332,	0,
#Partially deleted in new
chr13	78578475	78617328	chr13:78578475-78617328	0	+	78578475	78578475	8553170	4	188,144,239,1654,	0,26825,28496,37199,
#Deleted in new
chr13	78596128	78599619	chr13:78596128-78599619	3	+	78596128	78596128	8553170	1	3491,	0,
#Deleted in new
chr13	78598361	78603560	chr13:78598361-78603560	3	-	78601414	78603326	789624	2	4190,357,	0,4842,
#Partially deleted in new
chr13	78614290	78659179	chr13:78614290-78659179	3	-	78615579	78659120	789624	6	2832,89,249,92,136,131,	0,20819,24532,27831,30571,44758,
#Deleted in new
chr13	78761174	78761651	chr13:78761174-78761651	7	+	78761174	78761174	16724991	1	477,	0,
#Partially deleted in new
chr13	78787318	78792307	chr13:78787318-78792307	3	-	78787318	78787318	8553170	3	161,68,147,	0,2198,4842,
#Partially deleted in new
chr13	78849230	78851208	chr13:78849230-78851208	7	+	78849230	78849230	16724991	2	616,1042,	0,936,
#Deleted in new
chr13	78908918	78910542	chr13:78908918-78910542	7	+	78908918	78908918	16724991	1	1624,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	79090782	79094119	chr13:79090782-79094119	7	+	79090782	79090782	16724991	2	379,85,	0,3252,
#Partially deleted in new
chr13	79166118	79166885	chr13:79166118-79166885	7	+	79166118	79166118	16724991	1	767,	0,
#Partially deleted in new
chr13	79311823	79341212	chr13:79311823-79341212	0	-	79314969	79341212	789624	5	3170,114,87,201,90,	0,10525,22520,25278,29299,
#Partially deleted in new
chr13	79318867	79406221	chr13:79318867-79406221	1	-	79320620	79405774	789624	21	1843,114,87,201,105,168,75,126,132,165,160,112,141,141,240,261,218,89,137,119,518,	0,3481,15476,18234,22255,23796,25380,25801,35571,36352,39406,40707,46710,47187,47765,49862,52077,52974,58511,59921,86836,
#Partially deleted in new
chr13	79318867	79406221	chr13:79318867-79406221	1	-	79320620	79405774	789624	22	1843,114,87,201,105,168,75,126,72,123,165,160,112,156,141,240,261,218,89,137,119,518,	0,3481,15476,18234,22255,23796,25380,25801,34285,35571,36352,39406,40707,46710,47187,47765,49862,52077,52974,58511,59921,86836,
#Partially deleted in new
chr13	79319953	79405788	chr13:79319953-79405788	3	-	79320620	79405774	789624	21	757,114,87,201,105,168,75,126,123,165,160,112,141,141,240,261,218,89,137,119,85,	0,2395,14390,17148,21169,22710,24294,24715,34485,35266,38320,39621,45624,46101,46679,48776,50991,51888,57425,58835,85750,
#Partially deleted in new
chr13	79319953	79406215	chr13:79319953-79406215	1	-	79320620	79405774	789624	22	757,114,87,201,105,168,75,126,72,132,165,160,112,141,141,240,261,218,89,137,119,512,	0,2395,14390,17148,21169,22710,24294,24715,33199,34485,35266,38320,39621,45624,46101,46679,48776,50991,51888,57425,58835,85750,
#Deleted in new
chr13	79365759	79366710	chr13:79365759-79366710	0	-	79365759	79365759	8553170	2	436,78,	0,873,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	79376216	79406477	chr13:79376216-79406477	0	-	79376216	79376216	8553170	3	1299,119,774,	0,2572,29487,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	79389533	79389631	chr13:79389533-79389631	7	-	79389533	79389533	16724991	1	98,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	79406308	79422955	chr13:79406308-79422955	1	+	79406308	79406308	8553170	6	169,226,254,82,56,969,	0,6373,8802,11526,14451,15678,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	79406316	79422717	chr13:79406316-79422717	0	+	79406316	79406316	8553170	4	161,82,56,731,	0,11518,14443,15670,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	79406347	79424328	chr13:79406347-79424328	3	+	79406347	79406347	789624	7	130,226,103,82,56,228,1602,	0,6334,8914,11487,14412,15639,16379,
#Partially deleted in new
chr13	79406363	79417866	chr13:79406363-79417866	0	+	79406363	79406363	8553170	2	732,32,	0,11471,
#Partially deleted in new
chr13	79477363	79481231	chr13:79477363-79481231	3	-	79477363	79477363	5263520	3	256,95,80,	0,2472,3788,
#Partially deleted in new
chr13	79481123	79556070	chr13:79481123-79556070	3	+	79481203	79551120	789624	8	401,166,134,94,125,67,106,3555,	0,39686,52199,58558,62434,67204,69893,71392,
#Partially deleted in new
chr13	79481151	79556075	chr13:79481151-79556075	1	+	79481203	79551120	789624	8	373,166,134,94,125,67,106,3560,	0,39658,52171,58530,62406,67176,69865,71364,
#Partially deleted in new
chr13	79481305	79556027	chr13:79481305-79556027	0	+	79481485	79534442	8553170	9	219,166,134,163,94,125,67,106,3512,	0,39504,52017,53086,58376,62252,67022,69711,71210,
#Partially deleted in new
chr13	79481452	79553195	chr13:79481452-79553195	1	+	79481485	79551120	789624	8	72,166,134,94,65,67,106,680,	0,39357,51870,58229,62165,66875,69564,71063,
#Partially deleted in new
chr13	79481456	79552578	chr13:79481456-79552578	0	+	79481485	79548335	789624	7	68,166,134,94,67,106,63,	0,39353,51866,58225,66871,69560,71059,
#Partially deleted in new
chr13	79481473	79554096	chr13:79481473-79554096	1	+	79481485	79551120	789624	8	51,166,134,94,125,67,106,1581,	0,39336,51849,58208,62084,66854,69543,71042,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	79518991	79520975	chr13:79518991-79520975	0	+	79518991	79518991	8553170	2	178,166,	0,1818,
#Partially deleted in new
chr13	79566726	79571436	chr13:79566726-79571436	3	+	79566726	79566726	789624	3	81,188,357,	0,3836,4353,
#Partially deleted in new
chr13	79566745	79570848	chr13:79566745-79570848	0	+	79566745	79566745	8553170	2	62,286,	0,3817,
#Partially deleted in new
chr13	79637432	79667344	chr13:79637432-79667344	3	+	79637432	79637432	8553170	3	203,344,740,	0,13222,29172,
#Deleted in new
chr13	79804417	79805685	chr13:79804417-79805685	3	+	79804417	79804417	789624	2	67,361,	0,907,
#Partially deleted in new
chr13	79872585	79917944	chr13:79872585-79917944	3	+	79872585	79872585	789624	6	111,64,108,145,89,373,	0,36226,39809,42130,43948,44986,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	80011076	80028283	chr13:80011076-80028283	3	+	80011076	80011076	8553170	2	177,2065,	0,15142,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	80041724	80057110	chr13:80041724-80057110	0	-	80041724	80041724	8553170	5	992,200,210,88,1882,	0,5309,10501,13007,13504,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	80041743	80074557	chr13:80041743-80074557	0	-	80041743	80041743	8553170	6	1000,200,210,98,135,79,	0,5290,10482,13485,31645,32735,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr13	80041748	80074531	chr13:80041748-80074531	3	-	80041748	80041748	8553170	9	968,200,210,150,98,153,36,135,53,	0,5285,10477,12921,13480,16935,28030,31640,32730,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	80055273	80074528	chr13:80055273-80074528	0	-	80055273	80055273	8553170	6	53,153,36,136,135,50,	0,3410,14505,15028,18115,19205,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	80058571	80070364	chr13:80058571-80070364	1	-	80058571	80058571	8553170	6	265,137,3050,531,36,63,	0,1840,3355,7377,11207,11730,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	80115732	80134368	chr13:80115732-80134368	3	-	80115732	80115732	8553170	3	4949,146,390,	0,5998,18246,
#Deleted in new
chr13	80335975	80339659	chr13:80335975-80339659	1	-	80336757	80337705	0	2	1781,927,	0,2757,
#Deleted in new
chr13	80335975	80340951	chr13:80335975-80340951	3	-	80336757	80337705	0	2	1781,330,	0,4646,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	80369425	80369534	chr13:80369425-80369534	3	-	80369425	80369425	8553170	1	109,	0,
#Deleted in new
chr13	80619097	80620067	chr13:80619097-80620067	7	-	80619097	80619097	16724991	1	970,	0,
#Deleted in new
chr13	80654754	80657027	chr13:80654754-80657027	7	+	80654754	80654754	16724991	1	2273,	0,
#Deleted in new
chr13	80888347	80888867	chr13:80888347-80888867	7	+	80888347	80888347	16724991	1	520,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	81043669	81044442	chr13:81043669-81044442	3	+	81043669	81043669	8553170	2	181,476,	0,297,
#Deleted in new
chr13	81114865	81115295	chr13:81114865-81115295	7	-	81114865	81114865	16724991	1	430,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	81225864	81226983	chr13:81225864-81226983	3	-	81225864	81225864	789624	1	1119,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	81265746	81265837	chr13:81265746-81265837	3	+	81265746	81265746	8553170	1	91,	0,
#Partially deleted in new
chr13	81272890	81273170	chr13:81272890-81273170	7	+	81272890	81272890	16724991	1	280,	0,
#Deleted in new
chr13	81689910	81691072	chr13:81689910-81691072	7	+	81689910	81689910	16724991	1	1162,	0,
#Deleted in new
chr13	81690067	81690400	chr13:81690067-81690400	5	+	81690067	81690067	16724991	1	333,	0,
#Deleted in new
chr13	82823130	82824136	chr13:82823130-82824136	7	+	82823130	82823130	16724991	1	1006,	0,
#Deleted in new
chr13	83145539	83145903	chr13:83145539-83145903	7	+	83145539	83145539	16724991	1	364,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	83298070	83298167	chr13:83298070-83298167	3	-	83298070	83298070	8553170	1	97,	0,
#Deleted in new
chr13	83877204	83882393	chr13:83877204-83882393	3	-	83879416	83881507	0	1	5189,	0,
#Partially deleted in new
chr13	83877890	83892570	chr13:83877890-83892570	3	+	83877890	83877890	8553170	5	93,108,59,69,894,	0,812,8391,13420,13786,
#Partially deleted in new
chr13	83907300	83907781	chr13:83907300-83907781	7	-	83907300	83907300	16724991	1	481,	0,
#Deleted in new
chr13	84020326	84020762	chr13:84020326-84020762	7	+	84020326	84020326	16724991	1	436,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	84063105	84069408	chr13:84063105-84069408	3	+	84063105	84063105	8553170	3	128,86,828,	0,2229,5475,
#Deleted in new
chr13	84520102	84521568	chr13:84520102-84521568	7	+	84520102	84520102	16724991	1	1466,	0,
#Partially deleted in new
chr13	84521724	84523915	chr13:84521724-84523915	7	+	84521724	84521724	16724991	2	441,1359,	0,832,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	84562363	84563236	chr13:84562363-84563236	3	+	84562363	84562363	8553170	3	100,68,445,	0,245,428,
#Partially deleted in new
chr13	85065086	85078920	chr13:85065086-85078920	3	-	85065086	85065086	789624	5	132,29,101,180,159,	0,2913,9957,11716,13675,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	85363600	85544570	chr13:85363600-85544570	3	+	85363600	85363600	789624	4	495,128,93,195,	0,169475,178637,180775,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	85693936	85783203	chr13:85693936-85783203	3	-	85693936	85693936	8553170	4	634,100,150,378,	0,4879,27816,88889,
#Deleted in new
chr13	85792786	85799488	chr13:85792786-85799488	1	-	85793982	85796508	789624	2	3746,575,	0,6127,
#Deleted in new
chr13	85792786	85799386	chr13:85792786-85799386	1	-	85793982	85796508	789624	2	3746,473,	0,6127,
#Partially deleted in new
chr13	85793873	85806683	chr13:85793873-85806683	3	-	85793982	85796508	8553170	3	2659,73,153,	0,5040,12657,
#Deleted in new
chr13	85795912	85799433	chr13:85795912-85799433	0	-	85795912	85795912	8553170	2	31,520,	0,3001,
#Deleted in new
chr13	85837125	85837532	chr13:85837125-85837532	7	-	85837125	85837125	16724991	1	407,	0,
#Deleted in new
chr13	85968998	85969533	chr13:85968998-85969533	7	+	85968998	85968998	16724991	1	535,	0,
#Partially deleted in new
chr13	86060812	86170890	chr13:86060812-86170890	3	+	86060812	86060812	8553170	3	48,100,46,	0,12014,110032,
#Deleted in new
chr13	86266841	86266926	chr13:86266841-86266926	7	-	86266841	86266841	16724991	1	85,	0,
#Partially deleted in new
chr13	86275492	86277262	chr13:86275492-86277262	7	+	86275492	86275492	16724991	2	706,749,	0,1021,
#Deleted in new
chr13	86725499	86726053	chr13:86725499-86726053	7	+	86725499	86725499	16724991	1	554,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	86909585	86936612	chr13:86909585-86936612	0	+	86909585	86909585	8553170	4	30,62,149,37,	0,2334,26036,26990,
#Partially deleted in new
chr13	86911917	86937108	chr13:86911917-86937108	3	+	86911917	86911917	8553170	2	64,533,	0,24658,
#Deleted in new
chr13	87219003	87219269	chr13:87219003-87219269	7	+	87219003	87219003	16724991	1	266,	0,
#Partially deleted in new
chr13	87379471	87380258	chr13:87379471-87380258	7	-	87379471	87379471	16724991	2	196,262,	0,525,
#Partially deleted in new
chr13	87423492	87458407	chr13:87423492-87458407	3	+	87423492	87423492	8553170	2	28,379,	0,34536,
#Partially deleted in new
chr13	87427199	87447235	chr13:87427199-87447235	3	-	87427199	87427199	8553170	4	348,58,120,140,	0,898,17811,19896,
#Partially deleted in new
chr13	87427213	87460969	chr13:87427213-87460969	0	-	87427213	87427213	8553170	4	334,58,138,46,	0,884,19882,33710,
#Partially deleted in new
chr13	87443986	87670963	chr13:87443986-87670963	3	-	87443986	87443986	789624	6	1144,138,46,114,105,128,	0,3109,16937,29453,67379,226849,
#Partially deleted in new
chr13	87584857	87671259	chr13:87584857-87671259	0	-	87584857	87584857	8553170	3	223,193,424,	0,30705,85978,
#Deleted in new
chr13	87607906	87609234	chr13:87607906-87609234	3	-	87607906	87607906	8553170	1	1328,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	87612272	87671106	chr13:87612272-87671106	1	-	87612272	87612272	8553170	4	212,193,151,271,	0,3290,8735,58563,
#Partially deleted in new
chr13	87615591	87671119	chr13:87615591-87671119	1	-	87615591	87615591	8553170	3	164,131,284,	0,3671,55244,
#Deleted in new
chr13	87618664	87618740	chr13:87618664-87618740	3	-	87618664	87618664	5263520	1	76,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	87672614	87696272	chr13:87672614-87696272	3	+	87675388	87678265	789624	2	211,20892,	0,2766,
#Deleted in new
chr13	87765751	87765881	chr13:87765751-87765881	7	-	87765751	87765751	16724991	1	130,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	87801225	87803364	chr13:87801225-87803364	1	-	87801225	87801225	8553170	2	54,355,	0,1784,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	87807633	87811232	chr13:87807633-87811232	3	-	87807633	87807633	8553170	1	3599,	0,
#Deleted in new
chr13	87890171	87892472	chr13:87890171-87892472	7	-	87890171	87890171	16724991	1	2301,	0,
#Partially deleted in new
chr13	88142866	88236082	chr13:88142866-88236082	3	+	88142866	88142866	789624	5	234,99,52,96,80,	0,69474,71402,91456,93136,
#Deleted in new
chr13	88236546	88236969	chr13:88236546-88236969	7	-	88236546	88236546	16724991	1	423,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	88472150	88477267	chr13:88472150-88477267	3	-	88472150	88472150	8553170	2	2316,1369,	0,3748,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	88540863	88542506	chr13:88540863-88542506	3	+	88540863	88540863	8553170	3	580,71,237,	0,1038,1406,
#Partially deleted in new
chr13	88542284	88545509	chr13:88542284-88545509	0	+	88542284	88542284	8553170	2	140,167,	0,3058,
#Partially deleted in new
chr13	88571653	88572312	chr13:88571653-88572312	7	+	88571653	88571653	16724991	1	659,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	88626852	88630397	chr13:88626852-88630397	3	+	88626852	88626852	789624	2	1298,301,	0,3244,
#Deleted in new
chr13	88978446	88978785	chr13:88978446-88978785	7	-	88978446	88978446	16724991	1	339,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	89214846	89236890	chr13:89214846-89236890	3	-	89214846	89214846	789624	5	481,60,139,26,72,	0,3388,4724,5687,21972,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	89214895	89220559	chr13:89214895-89220559	0	-	89214895	89214895	8553170	4	432,168,60,26,	0,1078,3339,5638,
#Deleted in new
chr13	89248817	89250100	chr13:89248817-89250100	7	-	89248817	89248817	16724991	1	1283,	0,
#Partially deleted in new
chr13	89273202	89280240	chr13:89273202-89280240	3	+	89273202	89273202	8553170	2	160,574,	0,6464,
#Deleted in new
chr13	89361159	89363224	chr13:89361159-89363224	7	-	89361159	89361159	16724991	1	2065,	0,
#Partially deleted in new
chr13	89477607	89500509	chr13:89477607-89500509	3	-	89477607	89477607	789624	2	530,136,	0,22766,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	89548690	89553804	chr13:89548690-89553804	3	-	89548690	89548690	8553170	3	521,90,74,	0,2510,5040,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	89551232	89552389	chr13:89551232-89552389	3	+	89551232	89551232	8553170	2	45,285,	0,872,
#Deleted in new
chr13	89833156	89833941	chr13:89833156-89833941	7	-	89833156	89833156	16724991	1	785,	0,
#Deleted in new
chr13	89837169	89837237	chr13:89837169-89837237	3	+	89837169	89837169	8553170	1	68,	0,
#Deleted in new
chr13	89991830	89992878	chr13:89991830-89992878	7	+	89991830	89991830	16724991	1	1048,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	90060246	90119719	chr13:90060246-90119719	3	-	90060246	90060246	789624	6	366,83,136,256,2079,947,	0,6481,18880,45700,46336,58526,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	90060486	90119576	chr13:90060486-90119576	1	-	90060486	90060486	8553170	7	123,83,200,136,256,808,151,	0,6241,8264,18640,45460,47367,58939,
#Deleted in new
chr13	90135711	90135841	chr13:90135711-90135841	7	-	90135711	90135711	16724991	1	130,	0,
#Partially deleted in new
chr13	90170865	90171799	chr13:90170865-90171799	7	+	90170865	90170865	16724991	1	934,	0,
#Partially deleted in new
chr13	90230383	90231682	chr13:90230383-90231682	7	+	90230383	90230383	16724991	1	1299,	0,
#Partially deleted in new
chr13	90231181	90231277	chr13:90231181-90231277	3	+	90231181	90231181	5263520	1	96,	0,
#Partially deleted in new
chr13	90493286	90535080	chr13:90493286-90535080	3	+	90493286	90493286	789624	6	131,56,85,99,45,326,	0,4923,20201,34113,39489,41468,
#Deleted in new
chr13	90781765	90781869	chr13:90781765-90781869	3	-	90781765	90781765	8553170	1	104,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	90890953	90926597	chr13:90890953-90926597	3	-	90890953	90890953	789624	6	1488,154,18,117,124,117,	0,2433,10267,12440,20377,35527,
#Deleted in new
chr13	91023731	91023954	chr13:91023731-91023954	7	-	91023731	91023731	16724991	1	223,	0,
#Partially deleted in new
chr13	91087253	91089593	chr13:91087253-91089593	3	-	91087253	91087253	8553170	2	281,72,	0,2268,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	91127612	91131407	chr13:91127612-91131407	0	-	91127612	91127612	8553170	2	246,185,	0,3610,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	91127651	91131365	chr13:91127651-91131365	3	-	91127651	91127651	8553170	3	207,114,143,	0,3027,3571,
#Partially deleted in new
chr13	91272080	91272577	chr13:91272080-91272577	7	-	91272080	91272080	16724991	1	497,	0,
#Partially deleted in new
chr13	91347819	91354579	chr13:91347819-91354579	3	+	91347819	91347819	789624	4	140,73,71,647,	0,1878,2336,6113,
#Deleted in new
chr13	91347819	91352402	chr13:91347819-91352402	0	+	91347819	91347819	789624	2	140,2705,	0,1878,
#Deleted in new
chr13	91347941	91352096	chr13:91347941-91352096	1	+	91347941	91347941	8553170	3	18,73,1941,	0,1756,2214,
#Deleted in new
chr13	91350604	91350688	chr13:91350604-91350688	3	+	91350604	91350604	5263520	1	84,	0,
#Deleted in new
chr13	91350750	91350821	chr13:91350750-91350821	3	+	91350750	91350750	5263520	1	71,	0,
#Deleted in new
chr13	91350890	91350972	chr13:91350890-91350972	3	+	91350890	91350890	5263520	1	82,	0,
#Deleted in new
chr13	91351064	91351135	chr13:91351064-91351135	3	+	91351064	91351064	5263520	1	71,	0,
#Deleted in new
chr13	91351191	91351278	chr13:91351191-91351278	3	+	91351191	91351191	5263520	1	87,	0,
#Deleted in new
chr13	91351313	91351391	chr13:91351313-91351391	3	+	91351313	91351313	5263520	1	78,	0,
#Partially deleted in new
chr13	91398606	92867237	chr13:91398606-92867237	3	+	91399046	92866439	789624	8	603,162,695,134,126,121,160,956,	0,50154,294580,329925,357688,509330,746223,1467675,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	91485792	91486870	chr13:91485792-91486870	3	+	91485792	91485792	8553170	1	1078,	0,
#Partially deleted in new
chr13	91693185	91756424	chr13:91693185-91756424	1	+	91693185	91756424	789624	3	696,134,130,	0,35346,63109,
#Partially deleted in new
chr13	91725057	91756439	chr13:91725057-91756439	0	+	91725057	91725057	8553170	3	111,134,145,	0,3474,31237,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	91994517	91996523	chr13:91994517-91996523	3	+	91994517	91994517	8553170	1	2006,	0,
#Deleted in new
chr13	92059843	92059969	chr13:92059843-92059969	3	+	92059843	92059843	8553170	1	126,	0,
#Partially deleted in new
chr13	92180714	92180885	chr13:92180714-92180885	7	-	92180714	92180714	16724991	1	171,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	92239834	92241951	chr13:92239834-92241951	3	-	92239834	92239834	8553170	1	2117,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	92339793	92340603	chr13:92339793-92340603	3	-	92339793	92339793	8553170	2	194,207,	0,603,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	92446469	92449056	chr13:92446469-92449056	3	+	92446469	92446469	8553170	1	2587,	0,
#Partially deleted in new
chr13	92484605	92510094	chr13:92484605-92510094	3	+	92484605	92484605	8553170	2	76,582,	0,24907,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	92490162	92490220	chr13:92490162-92490220	3	+	92490162	92490162	5263520	1	58,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	92701388	92721614	chr13:92701388-92721614	3	-	92701388	92701388	789624	4	128,99,85,81,	0,4572,8100,20145,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	92701388	92719975	chr13:92701388-92719975	0	-	92701388	92701388	789624	4	128,99,85,68,	0,4572,8100,18519,
#Partially deleted in new
chr13	92866281	92873682	chr13:92866281-92873682	0	+	92866281	92873227	789624	2	154,456,	0,6945,
#Partially deleted in new
chr13	93056656	93057926	chr13:93056656-93057926	3	+	93056656	93056656	8553170	2	42,168,	0,1102,
#Deleted in new
chr13	93226611	93227317	chr13:93226611-93227317	3	-	93226611	93226611	8553170	1	706,	0,
#Partially deleted in new
chr13	93226841	94407401	chr13:93226841-94407401	3	+	93227456	94403217	789624	9	775,159,392,166,131,144,137,176,4387,	0,318421,603312,800887,1059507,1079138,1155572,1171624,1176173,
#Deleted in new
chr13	93394976	93395855	chr13:93394976-93395855	7	-	93394976	93394976	16724991	1	879,	0,
#Partially deleted in new
chr13	93818423	93836144	chr13:93818423-93836144	3	-	93818423	93818423	8553170	3	359,140,88,	0,12392,17633,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	94025469	94025598	chr13:94025469-94025598	7	-	94025469	94025469	16724991	1	129,	0,
#Partially deleted in new
chr13	94154192	94187991	chr13:94154192-94187991	3	-	94154192	94154192	789624	4	214,213,150,121,	0,32713,33031,33678,
#Partially deleted in new
chr13	94286347	94403217	chr13:94286347-94403217	1	+	94286347	94403217	789624	5	132,144,137,176,203,	0,19632,96066,112118,116667,
#Partially deleted in new
chr13	94436807	94479669	chr13:94436807-94479669	3	-	94439897	94479255	0	8	3269,202,136,180,167,101,300,709,	0,6628,23283,25202,28825,29750,31938,42153,
#Partially deleted in new
chr13	94439486	94468770	chr13:94439486-94468770	0	-	94444416	94468770	789624	9	590,202,74,73,136,180,167,101,25,	0,3949,4876,6202,20604,22523,26146,27071,29259,
#Partially deleted in new
chr13	94439588	94479682	chr13:94439588-94479682	1	-	94439897	94479255	0	10	488,202,43,56,136,180,167,101,300,722,	0,3847,6130,13018,20502,22421,26044,26969,29157,39372,
#Partially deleted in new
chr13	94462120	94467955	chr13:94462120-94467955	0	-	94462120	94462120	8553170	4	69,167,101,357,	0,3512,4437,5478,
#Partially deleted in new
chr13	94465456	94479669	chr13:94465456-94479669	0	-	94465456	94465456	8553170	3	343,2488,709,	0,1101,13504,
#Partially deleted in new
chr13	94574050	94596257	chr13:94574050-94596257	3	-	94574781	94596136	789624	12	802,98,59,166,44,60,99,143,91,69,67,207,	0,2263,3320,3954,4679,5843,7040,9043,16802,18190,19790,22000,
#Partially deleted in new
chr13	94578729	94596242	chr13:94578729-94596242	0	-	94578729	94578729	8553170	8	44,60,99,143,91,69,67,268,	0,1164,2361,4364,12123,13511,15111,17245,
#Partially deleted in new
chr13	94579285	94581189	chr13:94579285-94581189	0	-	94579285	94579285	8553170	2	668,99,	0,1805,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr13	94601902	94634645	chr13:94601902-94634645	3	+	94601927	94627171	789624	9	170,159,201,181,50,158,192,78,7633,	0,3488,10287,17247,17565,19175,21206,24063,25110,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	94651396	94651529	chr13:94651396-94651529	7	-	94651396	94651396	16724991	1	133,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	94699222	94699502	chr13:94699222-94699502	3	-	94699222	94699222	8553170	1	280,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	94699693	94702862	chr13:94699693-94702862	3	-	94699693	94699693	8553170	3	196,50,1598,	0,994,1571,
#Deleted in new
chr13	94709621	94712399	chr13:94709621-94712399	3	-	94711218	94712049	789624	1	2778,	0,
#Deleted in new
chr13	94712715	94716246	chr13:94712715-94716246	3	+	94712715	94712715	789624	2	678,2609,	0,922,
#Partially deleted in new
chr13	94757450	94759272	chr13:94757450-94759272	7	-	94757450	94757450	16724991	1	1822,	0,
#Deleted in new
chr13	94760552	94761015	chr13:94760552-94761015	7	-	94760552	94760552	16724991	1	463,	0,
#Deleted in new
chr13	94960040	94961319	chr13:94960040-94961319	3	+	94960040	94960040	789624	1	1279,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	95019234	95019336	chr13:95019234-95019336	3	+	95019234	95019234	8553170	1	102,	0,
#Partially deleted in new
chr13	95019828	95301446	chr13:95019828-95301446	3	-	95021574	95301314	789624	31	1854,135,106,173,90,156,192,101,111,120,151,80,147,95,38,141,210,97,87,95,192,90,102,250,126,164,90,225,121,111,206,	0,14776,23853,24437,33266,42875,51833,53375,54385,55603,63311,96093,141360,143293,143781,144549,146329,150703,157878,158168,166872,168624,175007,186703,187971,189605,190863,214781,227146,227814,281412,
#Partially deleted in new
chr13	95019834	95301437	chr13:95019834-95301437	1	-	95021574	95301314	789624	31	1848,135,106,173,90,156,192,101,111,120,151,80,147,95,38,141,210,97,87,95,192,90,102,250,126,164,90,225,121,111,197,	0,14770,23847,24431,33260,42869,51827,53369,54379,55597,63305,96087,141354,143287,143775,144543,146323,150697,157872,158162,166866,168618,175001,186697,187965,189599,190857,214775,227140,227808,281406,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr13	95019856	95301475	chr13:95019856-95301475	0	-	95161268	95301314	789624	33	1826,135,106,173,90,286,156,192,101,111,120,151,80,147,28,95,38,141,210,97,87,95,192,90,102,250,126,164,90,225,121,111,235,	0,14748,23825,24409,33238,35713,42847,51805,53347,54357,55575,63283,96065,141332,141908,143265,143753,144521,146301,150675,157850,158140,166844,168596,174979,186675,187943,189577,190835,214753,227118,227786,281384,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr13	95019856	95301451	chr13:95019856-95301451	0	-	95266218	95301314	789624	32	1826,135,106,173,90,156,192,101,111,120,151,80,147,95,38,141,210,97,87,95,192,90,102,250,126,164,90,225,121,111,166,211,	0,14748,23825,24409,33238,42847,51805,53347,54357,55575,63283,96065,141332,143265,143753,144521,146301,150675,157850,158140,166844,168596,174979,186675,187943,189577,190835,214753,227118,227786,246242,281384,
#Partially deleted in new
chr13	95021553	95301319	chr13:95021553-95301319	1	-	95021574	95301314	789624	30	129,135,106,173,90,156,192,101,111,120,151,80,147,95,38,210,97,87,95,192,90,102,250,126,164,90,225,121,111,79,	0,13051,22128,22712,31541,41150,50108,51650,52660,53878,61586,94368,139635,141568,142056,144604,148978,156153,156443,165147,166899,173282,184978,186246,187880,189138,213056,225421,226089,279687,
#Deleted in new
chr13	95043319	95044329	chr13:95043319-95044329	0	-	95043319	95043319	8553170	2	468,64,	0,946,
#Partially deleted in new
chr13	95071729	95073527	chr13:95071729-95073527	0	-	95071729	95071729	8553170	2	124,324,	0,1474,
#Partially deleted in new
chr13	95073269	95148960	chr13:95073269-95148960	0	-	95073269	95073269	8553170	6	35,111,120,151,80,65,	0,944,2162,9870,42652,75626,
#Partially deleted in new
chr13	95074246	95075710	chr13:95074246-95075710	0	-	95074246	95074246	8553170	2	78,279,	0,1185,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr13	95075040	95301444	chr13:95075040-95301444	0	-	95075040	95075040	8553170	23	511,151,80,147,95,38,141,210,97,87,95,192,90,102,250,126,164,90,225,121,111,153,204,	0,8099,40881,86148,88081,88569,89337,91117,95491,102666,102956,111660,113412,119795,131491,132759,134393,135651,159569,171934,172602,191071,226200,
#Partially deleted in new
chr13	95095768	95301433	chr13:95095768-95301433	1	-	95096134	95301314	789624	20	411,80,147,95,38,141,210,97,87,95,192,90,102,250,126,164,90,121,111,193,	0,20153,65420,67353,67841,68609,70389,74763,81938,82228,90932,92684,99067,110763,112031,113665,114923,151206,151874,205472,
#Partially deleted in new
chr13	95095796	95301302	chr13:95095796-95301302	0	-	95266218	95301302	789624	22	383,80,147,95,38,141,210,97,87,95,192,90,102,250,126,164,90,225,121,111,153,62,	0,20125,65392,67325,67813,68581,70361,74735,81910,82200,90904,92656,99039,110735,112003,113637,114895,138813,151178,151846,170315,205444,
#Partially deleted in new
chr13	95095943	95301446	chr13:95095943-95301446	1	-	95096134	95301314	789624	21	236,80,147,95,38,141,210,97,87,95,192,90,102,250,126,164,90,225,121,111,206,	0,19978,65245,67178,67666,68434,70214,74588,81763,82053,90757,92509,98892,110588,111856,113490,114748,138666,151031,151699,205297,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr13	95166222	95301335	chr13:95166222-95301335	0	-	95266218	95269422	789624	17	145,97,87,95,192,90,102,250,126,164,90,225,121,111,153,113,95,	0,4309,11484,11774,20478,22230,28613,40309,41577,43211,44469,68387,80752,81420,99889,103087,135018,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr13	95166222	95301335	chr13:95166222-95301335	0	-	95166222	95269422	789624	16	145,97,87,95,192,90,102,250,126,164,90,225,121,111,113,95,	0,4309,11484,11774,20478,22230,28613,40309,41577,43211,44469,68387,80752,81420,103087,135018,
#Partially deleted in new
chr13	95170221	95301410	chr13:95170221-95301410	0	-	95170221	95170221	8553170	14	407,82,95,192,90,102,250,126,164,90,225,121,111,170,	0,7485,7775,16479,18231,24614,36310,37578,39212,40470,64388,76753,77421,131019,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	95310829	95310955	chr13:95310829-95310955	3	-	95310829	95310829	8553170	1	126,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	95336105	95336201	chr13:95336105-95336201	3	-	95336105	95336105	8553170	1	96,	0,
#Partially deleted in new
chr13	95394048	95394454	chr13:95394048-95394454	7	+	95394048	95394048	16724991	1	406,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	95433603	95579759	chr13:95433603-95579759	1	+	95433833	95578014	789624	5	444,162,82,108,1860,	0,126528,126778,143627,144296,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	95479443	95533910	chr13:95479443-95533910	3	-	95479443	95479443	789624	4	519,67,96,213,	0,17615,49048,54254,
#Partially deleted in new
chr13	95552724	95578247	chr13:95552724-95578247	3	+	95552753	95578014	789624	5	249,162,82,108,348,	0,7407,7657,24506,25175,
#Deleted in new
chr13	95560149	95560938	chr13:95560149-95560938	1	+	95560157	95560467	789624	2	144,557,	0,232,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr13	95578201	95644690	chr13:95578201-95644690	1	-	95582233	95642029	789624	22	4112,175,131,191,54,130,163,143,60,57,49,141,63,138,162,125,88,561,248,215,98,314,	0,6534,7804,9337,10952,11601,12077,15742,21163,27801,33243,33835,41683,44141,46566,51787,55032,63093,63792,64841,65399,66175,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr13	95578202	95643263	chr13:95578202-95643263	3	-	95582233	95642029	789624	21	4111,175,131,191,54,130,163,143,60,57,57,49,141,63,138,162,125,88,561,248,221,	0,6533,7803,9336,10951,11600,12076,15741,21162,27800,31254,33242,33834,41682,44140,46565,51786,55031,63092,63791,64840,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr13	95578202	95643263	chr13:95578202-95643263	1	-	95582233	95642029	789624	20	4111,175,131,191,54,130,163,143,60,57,49,141,63,138,162,125,88,561,248,221,	0,6533,7803,9336,10951,11600,12076,15741,21162,27800,33242,33834,41682,44140,46565,51786,55031,63092,63791,64840,
#Partially deleted in new
chr13	95581951	95644703	chr13:95581951-95644703	1	-	95582233	95642029	789624	23	362,175,131,191,54,130,163,143,60,57,57,49,141,63,138,162,125,88,561,248,215,98,327,	0,2784,4054,5587,7202,7851,8327,11992,17413,24051,27505,29493,30085,37933,40391,42816,48037,51282,59343,60042,61091,61649,62425,
#Partially deleted in new
chr13	95581969	95588133	chr13:95581969-95588133	0	-	95581969	95581969	8553170	4	344,175,131,595,	0,2766,4036,5569,
#Partially deleted in new
chr13	95584577	95587674	chr13:95584577-95587674	0	-	95584577	95584577	8553170	3	333,131,136,	0,1428,2961,
#Partially deleted in new
chr13	95599356	95642029	chr13:95599356-95642029	0	-	95630802	95642029	789624	12	68,57,57,49,141,63,138,162,125,100,88,735,	0,6646,10100,12088,12680,20528,22986,25411,30632,31357,33877,41938,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	95637008	95644666	chr13:95637008-95644666	0	-	95637008	95637008	8553170	6	168,561,248,215,98,290,	0,4286,4985,6034,6592,7368,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	95648732	95676794	chr13:95648732-95676794	0	-	95648732	95648732	8553170	2	102,299,	0,27763,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	95672834	95676925	chr13:95672834-95676925	3	-	95672834	95672834	789624	2	1834,1074,	0,3017,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr13	95677138	95794989	chr13:95677138-95794989	3	+	95677255	95791030	0	12	199,111,125,75,153,182,120,106,121,133,149,4117,	0,32088,46103,48039,80505,82901,83540,86504,86694,108800,109868,113734,
#Partially deleted in new
chr13	95677157	95791843	chr13:95677157-95791843	1	+	95677255	95791030	789624	11	180,111,125,75,182,120,106,121,133,149,971,	0,32069,46084,48020,82882,83521,86485,86675,108781,109849,113715,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	95692537	95693972	chr13:95692537-95693972	7	+	95692537	95692537	16724991	2	289,853,	0,582,
#Partially deleted in new
chr13	95693982	95694495	chr13:95693982-95694495	7	-	95693982	95693982	16724991	1	513,	0,
#Partially deleted in new
chr13	95694568	95695705	chr13:95694568-95695705	7	+	95694568	95694568	16724991	1	1137,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	95744725	95745765	chr13:95744725-95745765	3	+	95744725	95744725	8553170	1	1040,	0,
#Partially deleted in new
chr13	95801579	96053383	chr13:95801579-96053383	3	-	95801789	96053312	789624	39	233,127,117,115,161,183,85,96,86,85,86,159,190,80,103,96,125,132,207,95,99,124,165,135,136,86,120,151,92,61,100,101,73,97,175,113,131,83,229,	0,31347,35506,51963,52735,54578,58011,59208,62049,65759,75699,76118,82911,86312,89282,92982,93600,99227,101274,124100,125448,125633,135344,138377,145457,146416,147755,168532,171000,182224,184753,188393,194483,197631,211727,221460,222049,230309,251575,
#Partially deleted in new
chr13	95809309	95809607	chr13:95809309-95809607	7	-	95809309	95809309	16724991	1	298,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	95854451	95859895	chr13:95854451-95859895	0	-	95854451	95854451	8553170	3	24,183,305,	0,1706,5139,
#Partially deleted in new
chr13	95863433	95877340	chr13:95863433-95877340	0	-	95863433	95863433	8553170	3	281,85,62,	0,3905,13845,
#Partially deleted in new
chr13	95867338	95894570	chr13:95867338-95894570	0	-	95867338	95867338	8553170	8	85,86,159,190,121,80,103,9,	0,9940,10359,17152,19934,20553,23523,27223,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	95876901	95895248	chr13:95876901-95895248	0	-	95876901	95876901	8553170	6	955,190,80,103,96,69,	0,7589,10990,13960,17660,18278,
#Partially deleted in new
chr13	95983522	96013411	chr13:95983522-96013411	0	-	95983522	95983522	8553170	7	73,61,100,101,73,97,105,	0,281,2810,6450,12540,15688,29784,
#Partially deleted in new
chr13	95983523	96053482	chr13:95983523-96053482	1	-	95986425	96053312	789624	10	72,61,100,73,97,175,113,131,83,328,	0,280,2809,12539,15687,29783,39516,40105,48365,69631,
#Partially deleted in new
chr13	95984903	95999307	chr13:95984903-95999307	0	-	95984903	95984903	8553170	5	434,100,101,73,97,	0,1429,5069,11159,14307,
#Partially deleted in new
chr13	95984909	96053400	chr13:95984909-96053400	1	-	95985249	96053312	789624	10	428,100,101,73,97,175,113,131,83,246,	0,1423,5063,11153,14301,28397,38130,38719,46979,68245,
#Partially deleted in new
chr13	95985046	96013476	chr13:95985046-96013476	0	-	95985046	95985046	8553170	7	291,100,78,101,73,97,170,	0,1286,4474,4926,11016,14164,28260,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	95990144	96053393	chr13:95990144-96053393	1	-	95991460	96053312	789624	8	1329,73,97,175,113,131,83,239,	0,5918,9066,23162,32895,33484,41744,63010,
#Partially deleted in new
chr13	95995352	96053482	chr13:95995352-96053482	1	-	95995352	96053312	789624	8	10,73,97,175,113,131,83,328,	0,710,3858,17954,27687,28276,36536,57802,
#Partially deleted in new
chr13	95995910	96053482	chr13:95995910-96053482	1	-	95995910	96053312	789624	8	4,73,97,175,113,131,83,328,	0,152,3300,17396,27129,27718,35978,57244,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	96090838	96839562	chr13:96090838-96839562	3	+	96090862	96833198	789624	2	731,7073,	0,741651,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	96169544	96169847	chr13:96169544-96169847	3	+	96169544	96169544	8553170	1	303,	0,
#Deleted in new
chr13	96427228	96427292	chr13:96427228-96427292	3	+	96427228	96427228	5263520	1	64,	0,
#Partially deleted in new
chr13	96573658	96574499	chr13:96573658-96574499	7	+	96573658	96573658	16724991	1	841,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	96832487	96839560	chr13:96832487-96839560	1	+	96832487	96833198	789624	1	7073,	0,
#Deleted in new
chr13	96883841	96885821	chr13:96883841-96885821	7	-	96883841	96883841	16724991	1	1980,	0,
#Partially deleted in new
chr13	96941280	96948290	chr13:96941280-96948290	5	-	96941280	96941280	16724991	2	519,297,	0,6713,
#Partially deleted in new
chr13	96941428	96984172	chr13:96941428-96984172	7	-	96941428	96941428	16724991	3	371,102,113,	0,14433,42631,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	96947636	96948927	chr13:96947636-96948927	5	-	96947636	96947636	16724991	1	1291,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	96948017	96949584	chr13:96948017-96949584	3	+	96948017	96948017	8553170	2	104,1120,	0,447,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	96948318	96949583	chr13:96948318-96949583	0	+	96948318	96948318	8553170	1	1265,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	96949248	96949533	chr13:96949248-96949533	3	-	96949248	96949248	8553170	1	285,	0,
#Partially deleted in new
chr13	96985718	96994350	chr13:96985718-96994350	3	-	96986745	96987759	789624	4	2115,52,65,53,	0,4039,6789,8579,
#Partially deleted in new
chr13	96986745	96994369	chr13:96986745-96994369	1	-	96986745	96987759	789624	4	1030,52,151,72,	0,3012,5676,7552,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	96987552	96994730	chr13:96987552-96994730	0	-	96987552	96987759	789624	4	223,52,151,162,	0,2205,4869,7016,
#Partially deleted in new
chr13	96987572	96994476	chr13:96987572-96994476	0	-	96987572	96987759	789624	4	261,52,151,179,	0,2185,4849,6725,
#Partially deleted in new
chr13	97172468	97179622	chr13:97172468-97179622	3	-	97172468	97172468	789624	2	396,296,	0,6858,
#Partially deleted in new
chr13	97221433	97394120	chr13:97221433-97394120	1	+	97276235	97391449	0	7	126,778,165,201,264,154,2799,	0,54198,112842,121582,125370,136048,169888,
#Partially deleted in new
chr13	97222295	97394119	chr13:97222295-97394119	1	+	97276235	97391449	0	7	236,778,165,201,264,154,2798,	0,53336,111980,120720,124508,135186,169026,
#Partially deleted in new
chr13	97222295	97394119	chr13:97222295-97394119	1	+	97276235	97391449	0	8	236,778,165,201,264,154,36,2798,	0,53336,111980,120720,124508,135186,142840,169026,
#Partially deleted in new
chr13	97222354	97394120	chr13:97222354-97394120	3	+	97276235	97391336	0	9	177,778,165,201,264,154,36,95,2799,	0,53277,111921,120661,124449,135127,142781,144104,168967,
#Partially deleted in new
chr13	97222354	97392008	chr13:97222354-97392008	0	+	97276235	97356796	789624	11	177,778,165,201,200,27,54,154,36,95,687,	0,53277,111921,120661,124449,124686,134441,135127,142781,144104,168967,
#Partially deleted in new
chr13	97356795	97391599	chr13:97356795-97391599	0	+	97356795	97391336	789624	4	54,154,95,278,	0,686,9663,34526,
#Deleted in new
chr13	97362971	97363101	chr13:97362971-97363101	7	-	97362971	97362971	16724991	1	130,	0,
#Partially deleted in new
chr13	97434221	97469128	chr13:97434221-97469128	3	+	97434470	97464442	0	2	563,4924,	0,29983,
#Partially deleted in new
chr13	97434470	97464710	chr13:97434470-97464710	0	+	97434470	97441780	789624	3	314,83,506,	0,7297,29734,
#Deleted in new
chr13	97435945	97436168	chr13:97435945-97436168	3	+	97435945	97435945	8553170	1	223,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	97437267	97437630	chr13:97437267-97437630	3	+	97437267	97437267	8553170	1	363,	0,
#Deleted in new
chr13	97475741	97476459	chr13:97475741-97476459	7	+	97475741	97475741	16724991	1	718,	0,
#Partially deleted in new
chr13	97675010	97677963	chr13:97675010-97677963	3	-	97675010	97675010	8553170	2	519,173,	0,2780,
#Deleted in new
chr13	97901652	97902288	chr13:97901652-97902288	7	+	97901652	97901652	16724991	1	636,	0,
#Partially deleted in new
chr13	97939355	97953539	chr13:97939355-97953539	3	+	97939355	97939355	8553170	2	109,50,	0,14134,
#Partially deleted in new
chr13	97953657	97985622	chr13:97953657-97985622	0	+	97969780	97985622	789624	5	59,108,94,81,202,	0,16065,23035,28845,31763,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	97953657	97969905	chr13:97953657-97969905	0	+	97953657	97953657	8553170	2	541,183,	0,16065,
#Partially deleted in new
chr13	97953674	98024297	chr13:97953674-98024297	1	+	97969780	98021822	789624	29	42,80,108,94,81,193,103,97,105,123,121,88,107,125,90,174,219,84,133,122,97,173,112,56,123,220,229,142,2562,	0,444,16048,23018,28828,31746,35387,36451,36758,39217,39430,43856,46864,48792,49009,49189,52455,54384,56206,56428,58571,60367,61855,62051,63054,64810,65906,67317,68061,
#Partially deleted in new
chr13	97953674	97985554	chr13:97953674-97985554	0	+	97969780	97985554	789624	6	42,96,108,94,81,134,	0,428,16048,23018,28828,31746,
#Partially deleted in new
chr13	97953682	97985459	chr13:97953682-97985459	0	+	97969780	97985459	789624	7	34,80,57,108,94,81,39,	0,436,6664,16040,23010,28820,31738,
#Partially deleted in new
chr13	97953682	97985472	chr13:97953682-97985472	0	+	97976696	97985472	789624	7	34,80,108,107,94,81,52,	0,436,16040,22208,23010,28820,31738,
#Partially deleted in new
chr13	97953682	97982569	chr13:97953682-97982569	0	+	97969780	97981289	789624	6	34,80,108,94,159,67,	0,436,16040,23010,27559,28820,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	97953682	97982550	chr13:97953682-97982550	0	+	97969780	97982550	789624	7	34,80,57,123,108,94,48,	0,436,6664,9477,16040,23010,28820,
#Partially deleted in new
chr13	97953693	97976792	chr13:97953693-97976792	0	+	97969780	97976792	789624	4	234,80,108,100,	0,425,16029,22999,
#Partially deleted in new
chr13	97953713	97985491	chr13:97953713-97985491	0	+	97953895	97985491	789624	5	214,108,94,81,71,	0,16009,22979,28789,31707,
#Partially deleted in new
chr13	97953925	97985547	chr13:97953925-97985547	0	+	97969780	97985547	789624	6	78,103,108,94,81,127,	0,170,15797,22767,28577,31495,
#Partially deleted in new
chr13	97953958	97982584	chr13:97953958-97982584	0	+	97969780	97982584	789624	4	240,108,94,82,	0,15764,22734,28544,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	97960191	97985489	chr13:97960191-97985489	0	+	97969780	97985489	789624	6	67,123,108,94,81,69,	0,2968,9531,16501,22311,25229,
#Partially deleted in new
chr13	97960217	97985515	chr13:97960217-97985515	0	+	97969780	97985515	789624	5	186,108,94,81,95,	0,9505,16475,22285,25203,
#Partially deleted in new
chr13	97960248	98022489	chr13:97960248-98022489	2	+	97976696	98021822	789624	29	155,108,107,94,81,193,103,97,105,123,121,88,107,125,90,174,219,84,133,122,97,173,112,56,123,220,229,142,754,	0,9474,15642,16444,22254,25172,28813,29877,30184,32643,32856,37282,40290,42218,42435,42615,45881,47810,49632,49854,51997,53793,55281,55477,56480,58236,59332,60743,61487,
#Partially deleted in new
chr13	97969780	97981289	chr13:97969780-97981289	1	+	97969780	97981289	789624	3	50,94,48,	0,6912,11461,
#Partially deleted in new
chr13	97975630	97990170	chr13:97975630-97990170	0	+	97976696	97990170	789624	6	367,94,81,193,103,45,	0,1062,6872,9790,13431,14495,
#Partially deleted in new
chr13	97976464	97989109	chr13:97976464-97989109	0	+	97985429	97989109	789624	6	38,94,89,81,193,48,	0,228,5590,6038,8956,12597,
#Partially deleted in new
chr13	97976631	98021882	chr13:97976631-98021882	1	+	97976696	98021822	789624	26	155,81,193,103,97,105,123,121,88,107,125,90,174,219,84,133,122,97,173,112,56,123,220,229,142,147,	0,5871,8789,12430,13494,13801,16260,16473,20899,23907,25835,26052,26232,29498,31427,33249,33471,35614,37410,38898,39094,40097,41853,42949,44360,45104,
#Partially deleted in new
chr13	97976674	97989099	chr13:97976674-97989099	0	+	97976696	97988006	789624	5	112,81,193,112,38,	0,5828,8746,11315,12387,
#Partially deleted in new
chr13	97976702	97990502	chr13:97976702-97990502	0	+	97976702	97990502	789624	5	84,193,103,97,70,	0,8718,12359,13423,13730,
#Partially deleted in new
chr13	97976962	98022028	chr13:97976962-98022028	0	+	97976962	98021822	789624	26	95,81,193,103,97,105,123,121,88,107,125,90,174,219,84,133,122,97,173,112,56,123,220,229,142,293,	0,5540,8458,12099,13163,13470,15929,16142,20568,23576,25504,25721,25901,29167,31096,32918,33140,35283,37079,38567,38763,39766,41522,42618,44029,44773,
#Partially deleted in new
chr13	97979869	97990210	chr13:97979869-97990210	0	+	97979910	97990210	789624	5	74,81,193,103,85,	0,2633,5551,9192,10256,
#Deleted in new
chr13	97986949	97987216	chr13:97986949-97987216	7	-	97986949	97986949	16724991	1	267,	0,
#Partially deleted in new
chr13	97993149	98000922	chr13:97993149-98000922	0	+	97993149	97993149	8553170	3	76,88,384,	0,4381,7389,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr13	98001645	98022503	chr13:98001645-98022503	0	+	98001645	98001645	8553170	16	946,90,174,219,84,133,122,97,173,112,56,123,220,229,142,768,	0,1038,1218,4484,6413,8235,8457,10600,12396,13884,14080,15083,16839,17935,19346,20090,
#Partially deleted in new
chr13	98002475	98006325	chr13:98002475-98006325	0	+	98002475	98002475	8553170	3	298,174,196,	0,388,3654,
#Partially deleted in new
chr13	98003008	98007587	chr13:98003008-98007587	0	+	98003008	98003008	8553170	3	29,219,226,	0,3121,4353,
#Partially deleted in new
chr13	98018585	98019941	chr13:98018585-98019941	0	+	98018585	98018585	8553170	2	119,361,	0,995,
#Partially deleted in new
chr13	98019578	98021411	chr13:98019578-98021411	0	+	98019578	98019578	8553170	2	231,420,	0,1413,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr13	98142561	98449773	chr13:98142561-98449773	1	+	98213242	98448317	789624	28	216,194,105,43,79,98,115,148,96,164,69,76,250,188,90,134,79,238,131,93,69,90,83,113,167,108,152,1538,	0,70658,201200,222833,225555,235259,242168,243105,245821,247395,248250,251081,252665,266776,268172,269339,282010,288481,293014,295204,296242,296545,297399,297561,298108,303536,304104,305674,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr13	98143097	98449771	chr13:98143097-98449771	1	+	98213242	98448317	789624	28	395,194,105,43,79,98,115,148,96,164,69,76,250,188,90,134,79,238,131,93,69,90,83,113,167,108,152,1536,	0,70122,200664,222297,225019,234723,241632,242569,245285,246859,247714,250545,252129,266240,267636,268803,281474,287945,292478,294668,295706,296009,296863,297025,297572,303000,303568,305138,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr13	98143250	98455176	chr13:98143250-98455176	3	+	98213242	98448317	0	27	242,194,105,43,79,98,115,148,96,164,69,76,250,188,90,134,79,238,131,69,90,83,113,167,108,152,6941,	0,69969,200511,222144,224866,234570,241479,242416,245132,246706,247561,250392,251976,266087,267483,268650,281321,287792,292325,295553,295856,296710,296872,297419,302847,303415,304985,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr13	98143415	98407494	chr13:98143415-98407494	1	+	98213242	98396468	789624	13	77,194,105,43,79,98,115,148,96,164,69,76,12268,	0,69804,200346,221979,224701,234405,241314,242251,244967,246541,247396,250227,251811,
#Partially deleted in new
chr13	98143479	98245304	chr13:98143479-98245304	1	+	98213242	98244709	0	3	13,194,814,	0,69740,101011,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	98175784	98177265	chr13:98175784-98177265	3	-	98176162	98177236	0	2	392,984,	0,497,
#Partially deleted in new
chr13	98177816	98384844	chr13:98177816-98384844	0	+	98213242	98384844	789624	7	113,194,105,43,79,98,115,	0,35403,165945,187578,190300,200004,206913,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	98203834	98204192	chr13:98203834-98204192	3	-	98203834	98203834	8553170	1	358,	0,
#Deleted in new
chr13	98208523	98208600	chr13:98208523-98208600	3	+	98208523	98208523	5263520	1	77,	0,
#Deleted in new
chr13	98233649	98234700	chr13:98233649-98234700	3	+	98233649	98233649	8553170	1	1051,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	98328190	98343812	chr13:98328190-98343812	0	+	98328190	98328190	8553170	3	134,272,51,	0,345,15571,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	98328227	98384831	chr13:98328227-98384831	0	+	98328227	98328227	8553170	7	263,88,105,43,79,98,102,	0,844,15534,37167,39889,49593,56502,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	98328717	98333238	chr13:98328717-98333238	0	+	98328717	98328717	8553170	2	90,468,	0,4053,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	98328777	98333238	chr13:98328777-98333238	0	+	98328777	98328777	8553170	3	30,211,468,	0,171,3993,
#Partially deleted in new
chr13	98328777	98388478	chr13:98328777-98388478	0	+	98328777	98328777	8553170	7	30,105,43,79,115,148,96,	0,14984,36617,39339,55952,56889,59605,
#Partially deleted in new
chr13	98328777	98385995	chr13:98328777-98385995	0	+	98328777	98328777	8553170	7	30,105,43,79,98,115,329,	0,14984,36617,39339,49043,55952,56889,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	98328777	98334349	chr13:98328777-98334349	0	+	98328777	98328777	8553170	2	30,751,	0,4821,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	98328777	98377918	chr13:98328777-98377918	0	+	98328777	98328777	8553170	6	382,149,105,43,79,98,	0,1013,14984,36617,39339,49043,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	98328777	98338879	chr13:98328777-98338879	0	+	98328777	98328777	8553170	2	382,374,	0,9728,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	98328777	98332871	chr13:98328777-98332871	0	+	98328777	98328777	8553170	3	382,303,101,	0,3583,3993,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	98328777	98332880	chr13:98328777-98332880	0	+	98328777	98328777	8553170	3	382,149,110,	0,1013,3993,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	98328777	98384832	chr13:98328777-98384832	0	+	98328777	98328777	8553170	6	382,105,43,79,98,103,	0,14984,36617,39339,49043,55952,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	98328777	98329754	chr13:98328777-98329754	0	+	98328777	98328777	8553170	2	382,424,	0,553,
#Partially deleted in new
chr13	98328777	98333235	chr13:98328777-98333235	0	+	98328777	98328777	8553170	3	30,88,465,	0,294,3993,
#Partially deleted in new
chr13	98328777	98382540	chr13:98328777-98382540	0	+	98328777	98328777	8553170	7	30,105,43,79,98,133,261,	0,14984,36617,39339,49043,52777,53502,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	98328777	98329984	chr13:98328777-98329984	0	+	98328777	98328777	8553170	2	382,194,	0,1013,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	98328777	98338879	chr13:98328777-98338879	0	+	98328777	98328777	8553170	2	382,136,	0,9966,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	98328777	98338758	chr13:98328777-98338758	0	+	98328777	98328777	8553170	3	382,149,253,	0,1013,9728,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	98328779	98345610	chr13:98328779-98345610	0	+	98328779	98328779	8553170	3	380,105,127,	0,14982,16704,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	98328782	98333161	chr13:98328782-98333161	0	+	98328782	98328782	8553170	3	377,103,391,	0,1008,3988,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	98328784	98333768	chr13:98328784-98333768	0	+	98328784	98328784	8553170	3	375,222,170,	0,3986,4814,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	98328879	98333238	chr13:98328879-98333238	0	+	98328879	98328879	8553170	2	280,468,	0,3891,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	98329654	98333236	chr13:98329654-98333236	3	-	98329654	98329654	8553170	2	213,295,	0,3287,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	98331757	98385754	chr13:98331757-98385754	0	+	98331757	98331757	8553170	7	27,105,43,79,98,115,88,	0,12004,33637,36359,46063,52972,53909,
#Partially deleted in new
chr13	98340688	98385766	chr13:98340688-98385766	0	+	98340688	98340688	8553170	7	327,105,43,79,98,115,100,	0,3073,24706,27428,37132,44041,44978,
#Partially deleted in new
chr13	98377820	98389693	chr13:98377820-98389693	0	+	98377820	98389540	789624	5	98,115,148,96,210,	0,6909,7846,10562,11663,
#Partially deleted in new
chr13	98383605	98385766	chr13:98383605-98385766	0	+	98383605	98383605	8553170	3	549,115,100,	0,1124,2061,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	98384360	98385786	chr13:98384360-98385786	0	+	98384360	98384360	8553170	2	484,120,	0,1306,
#Partially deleted in new
chr13	98390584	98395420	chr13:98390584-98395420	0	+	98390584	98390584	8553170	3	296,76,194,	0,3058,4642,
#Partially deleted in new
chr13	98431042	98436101	chr13:98431042-98436101	0	+	98431042	98435985	789624	2	238,526,	0,4533,
#Partially deleted in new
chr13	98431080	98440796	chr13:98431080-98440796	0	+	98431080	98440796	789624	6	200,131,90,83,113,127,	0,4495,8026,8880,9042,9589,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	98431156	98434997	chr13:98431156-98434997	0	+	98431156	98431156	8553170	1	3841,	0,
#Deleted in new
chr13	98435404	98435840	chr13:98435404-98435840	3	-	98435404	98435404	8553170	2	254,69,	0,367,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	98445152	98447844	chr13:98445152-98447844	0	+	98445152	98445152	8553170	1	2692,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr13	98445184	98576863	chr13:98445184-98576863	3	-	98453172	98576786	0	11	8025,137,69,124,146,186,158,109,57,231,119,	0,11983,15187,16589,18506,21191,29636,30065,37080,74058,131560,
#Deleted in new
chr13	98448873	98449515	chr13:98448873-98449515	0	+	98448873	98448873	8553170	2	348,162,	0,480,
#Deleted in new
chr13	98449010	98449770	chr13:98449010-98449770	0	+	98449010	98449010	8553170	2	211,228,	0,532,
#Partially deleted in new
chr13	98450198	98577151	chr13:98450198-98577151	1	-	98453172	98576786	789624	10	3011,137,69,124,146,186,158,109,231,407,	0,6969,10173,11575,13492,16177,24622,25051,69044,126546,
#Partially deleted in new
chr13	98450200	98466561	chr13:98450200-98466561	0	-	98453172	98466561	789624	5	3009,137,124,146,186,	0,6967,11573,13490,16175,
#Partially deleted in new
chr13	98452158	98521998	chr13:98452158-98521998	1	-	98453172	98521852	0	11	1051,137,69,124,146,186,158,109,57,231,224,	0,5009,8213,9615,11532,14217,22662,23091,30106,67084,69616,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	98455420	98463785	chr13:98455420-98463785	0	-	98457163	98463785	789624	4	1884,69,124,95,	0,4951,6353,8270,
#Partially deleted in new
chr13	98455981	98519267	chr13:98455981-98519267	0	-	98456463	98519267	789624	10	579,137,69,124,146,186,158,109,57,25,	0,1186,4390,5792,7709,10394,18839,19268,26283,63261,
#Partially deleted in new
chr13	98474860	98577940	chr13:98474860-98577940	0	-	98474860	98474860	8553170	5	118,109,57,231,32,	0,389,7404,44382,103048,
#Partially deleted in new
chr13	98505027	98576204	chr13:98505027-98576204	0	-	98505027	98505027	8553170	4	26,189,231,210,	0,3751,14215,70967,
#Deleted in new
chr13	98553242	98553780	chr13:98553242-98553780	7	+	98553242	98553242	16724991	1	538,	0,
#Deleted in new
chr13	98577243	98578830	chr13:98577243-98578830	3	+	98577243	98577243	8553170	2	51,1227,	0,360,
#Partially deleted in new
chr13	98610291	98610876	chr13:98610291-98610876	7	-	98610291	98610291	16724991	1	585,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	98629685	98629989	chr13:98629685-98629989	7	-	98629685	98629685	16724991	1	304,	0,
#Deleted in new
chr13	98640813	98641239	chr13:98640813-98641239	7	-	98640813	98640813	16724991	1	426,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	98671979	98672278	chr13:98671979-98672278	3	+	98671979	98671979	8553170	1	299,	0,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr13	98683800	98752654	chr13:98683800-98752654	3	-	98684723	98752598	789624	23	1115,108,144,109,108,50,147,120,82,89,33,45,90,87,83,84,91,100,120,142,82,17,60,	0,2389,3780,4447,4669,18679,20488,22333,24885,25771,25941,26066,28053,28697,32077,35436,37694,38003,40111,42322,42567,43042,68794,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	98720526	98726567	chr13:98720526-98726567	0	-	98720526	98720526	8553170	5	1059,100,120,142,200,	0,1277,3385,5596,5841,
#Partially deleted in new
chr13	98793428	99016052	chr13:98793428-99016052	1	-	98794625	99015608	789624	53	1320,139,101,191,211,147,114,123,107,58,216,114,183,138,116,68,48,67,115,134,118,114,179,112,84,147,72,126,70,116,90,87,122,124,93,66,188,80,123,83,123,204,141,75,68,175,135,96,70,83,90,117,606,	0,3686,3960,6859,11570,14232,15923,16740,30969,33401,35878,36214,37919,38220,44065,52495,55163,56618,59979,62469,66976,69590,69941,73996,74499,74802,86469,87118,88129,88463,89613,90384,91542,92279,93103,94729,94931,95203,104059,104750,108349,108859,109543,111203,120899,121900,127525,128622,129873,132408,136739,162006,222018,
#Partially deleted in new
chr13	98793486	98977990	chr13:98793486-98977990	3	-	98794747	98977909	789624	57	1262,8,139,101,191,211,147,36,6,114,123,107,69,58,216,114,183,138,116,68,48,67,115,134,118,114,179,112,84,147,72,126,70,116,90,87,122,124,93,66,188,80,123,83,123,204,141,75,68,175,135,96,70,83,90,117,207,	0,2719,3628,3902,6801,11512,14174,15153,15636,15865,16682,30911,32385,33343,35820,36156,37861,38162,44007,52437,55105,56560,59921,62411,66918,69532,69883,73938,74441,74744,86411,87060,88071,88405,89555,90326,91484,92221,93045,94671,94873,95145,104001,104692,108291,108801,109485,111145,120841,121842,127467,128564,129815,132350,136681,161948,184297,
#Partially deleted in new
chr13	98793486	98831793	chr13:98793486-98831793	0	-	98794625	98831793	789624	15	1262,139,101,191,211,147,36,114,123,107,58,216,114,183,145,	0,3628,3902,6801,11512,14174,15153,15865,16682,30911,33343,35820,36156,37861,38162,
#Partially deleted in new
chr13	98793486	98978084	chr13:98793486-98978084	1	-	98794648	98977909	789624	56	1265,144,101,191,211,147,36,6,114,123,107,69,58,216,114,183,138,116,68,48,67,115,134,118,114,179,112,84,147,72,126,70,116,90,87,122,124,93,66,188,80,123,83,123,204,141,75,68,175,135,96,70,83,90,117,301,	0,3623,3902,6801,11512,14174,15153,15636,15865,16682,30911,32385,33343,35820,36156,37861,38162,44007,52437,55105,56560,59921,62411,66918,69532,69883,73938,74441,74744,86411,87060,88071,88405,89555,90326,91484,92221,93045,94671,94873,95145,104001,104692,108291,108801,109485,111145,120841,121842,127467,128564,129815,132350,136681,161948,184297,
#Boundary problem: need 52, got 0, diff 52, mapped 0.0
chr13	98793491	98978061	chr13:98793491-98978061	0	-	98886535	98977909	789624	52	1257,139,101,191,211,147,114,123,107,58,216,114,183,138,116,44,48,67,115,4625,114,179,112,84,147,72,126,70,116,90,87,122,124,79,66,188,80,123,83,123,204,141,75,68,175,135,96,70,83,90,117,278,	0,3623,3897,6796,11507,14169,15860,16677,30906,33338,35815,36151,37856,38157,44002,51837,55100,56555,59916,62406,69527,69878,73933,74436,74739,86406,87055,88066,88400,89550,90321,91479,92216,93040,94666,94868,95140,103996,104687,108286,108796,109480,111140,120836,121837,127462,128559,129810,132345,136676,161943,184292,
#Partially deleted in new
chr13	98800287	98829455	chr13:98800287-98829455	0	-	98800287	98829455	789624	9	191,211,147,114,123,107,69,58,149,	0,4711,7373,9064,9881,24110,25584,26542,29019,
#Partially deleted in new
chr13	98807660	98829366	chr13:98807660-98829366	0	-	98807660	98829366	789624	6	147,114,123,107,58,60,	0,1691,2508,16737,19169,21646,
#Partially deleted in new
chr13	98809308	98847684	chr13:98809308-98847684	0	-	98809308	98845984	789624	11	157,123,107,58,216,114,183,138,116,137,1165,	0,860,15089,17521,19998,20334,22039,22340,28185,36615,37211,
#Partially deleted in new
chr13	98809310	99015780	chr13:98809310-99015780	0	-	98845943	99015608	789624	49	155,123,107,69,58,216,114,183,138,116,68,37,48,67,115,134,118,114,179,112,84,147,72,126,70,116,90,87,122,124,93,66,188,80,123,83,123,204,141,75,68,175,135,96,70,83,90,117,334,	0,858,15087,16561,17519,19996,20332,22037,22338,28183,36613,37209,39281,40736,44097,46587,51094,53708,54059,58114,58617,58920,70587,71236,72247,72581,73731,74502,75660,76397,77221,78847,79049,79321,88177,88868,92467,92977,93661,95321,105017,106018,111643,112740,113991,116526,120857,146124,206136,
#Partially deleted in new
chr13	98810258	98829496	chr13:98810258-98829496	0	-	98810258	98810258	8553170	5	33,107,104,58,190,	0,14139,15613,16571,19048,
#Partially deleted in new
chr13	98831395	98855984	chr13:98831395-98855984	0	-	98831395	98855984	789624	8	135,138,116,44,48,67,115,87,	0,253,6098,13933,17196,18651,22012,24502,
#Partially deleted in new
chr13	98831773	98850080	chr13:98831773-98850080	0	-	98831773	98850080	789624	5	13,116,137,48,34,	0,5720,14150,16818,18273,
#Deleted in new
chr13	98832083	98834629	chr13:98832083-98834629	3	+	98832083	98832083	789624	3	60,78,254,	0,915,2292,
#Partially deleted in new
chr13	98845947	98860476	chr13:98845947-98860476	0	-	98845947	98845947	8553170	7	113,37,48,67,115,134,72,	0,572,2644,4099,7460,9950,14457,
#Partially deleted in new
chr13	98853407	98856031	chr13:98853407-98856031	0	-	98853407	98856031	789624	3	115,207,134,	0,1126,2490,
#Partially deleted in new
chr13	98860180	98978084	chr13:98860180-98978084	1	-	98860339	98977909	789624	33	342,114,179,112,84,147,72,126,70,116,90,87,122,124,93,66,188,80,123,83,123,204,141,75,68,175,135,96,70,83,90,117,301,	0,2838,3189,7244,7747,8050,19717,20366,21377,21711,22861,23632,24790,25527,26351,27977,28179,28451,37307,37998,41597,42107,42791,44451,54147,55148,60773,61870,63121,65656,69987,95254,117603,
#Partially deleted in new
chr13	98860202	99086625	chr13:98860202-99086625	1	-	98860339	99086351	789624	33	320,114,179,112,84,147,72,126,70,116,90,87,122,124,93,66,188,80,123,83,123,204,141,75,68,175,135,96,70,83,90,117,403,	0,2816,3167,7222,7725,8028,19695,20344,21355,21689,22839,23610,24768,25505,26329,27955,28157,28429,37285,37976,41575,42085,42769,44429,54125,55126,60751,61848,63099,65634,69965,95232,226020,
#Deleted in new
chr13	98871741	98872005	chr13:98871741-98872005	7	+	98871741	98871741	16724991	1	264,	0,
#Deleted in new
chr13	98888134	98888685	chr13:98888134-98888685	0	-	98888134	98888134	8553170	3	89,188,54,	0,225,497,
#Partially deleted in new
chr13	98949718	98950447	chr13:98949718-98950447	7	-	98949718	98949718	16724991	1	729,	0,
#Partially deleted in new
chr13	98955434	99086393	chr13:98955434-99086393	0	-	98959453	99086351	789624	3	117,132,171,	0,3968,130788,
#Deleted in new
chr13	99025233	99025345	chr13:99025233-99025345	3	+	99025233	99025233	8553170	1	112,	0,
#Deleted in new
chr13	99087818	99088625	chr13:99087818-99088625	3	+	99087818	99087818	8553170	1	807,	0,
#Deleted in new
chr13	99173592	99174490	chr13:99173592-99174490	7	+	99173592	99173592	16724991	2	253,469,	0,429,
#Deleted in new
chr13	99190578	99190991	chr13:99190578-99190991	7	-	99190578	99190578	16724991	1	413,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	99196376	99200710	chr13:99196376-99200710	3	-	99196376	99196376	789624	2	1426,345,	0,3989,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	99196376	99200710	chr13:99196376-99200710	0	-	99196376	99196376	789624	2	1426,73,	0,4261,
#Partially deleted in new
chr13	99200773	99385315	chr13:99200773-99385315	0	+	99200908	99385315	789624	5	166,128,246,120,88,	0,37653,139546,167013,184454,
#Partially deleted in new
chr13	99200773	99385540	chr13:99200773-99385540	3	+	99200908	99385335	789624	9	166,128,120,110,124,48,246,120,313,	0,37653,43058,43741,113323,117248,139546,167013,184454,
#Partially deleted in new
chr13	99200886	99340565	chr13:99200886-99340565	0	+	99200886	99200886	8553170	8	53,139,128,120,110,124,48,246,	0,542,37540,42945,43628,113210,117135,139433,
#Partially deleted in new
chr13	99200908	99386427	chr13:99200908-99386427	1	+	99201411	99385335	789624	7	659,128,124,48,246,120,1200,	0,37518,113188,117113,139411,166878,184319,
#Partially deleted in new
chr13	99200915	99244624	chr13:99200915-99244624	0	+	99201135	99244624	789624	4	269,128,120,110,	0,37511,42916,43599,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	99205707	99206006	chr13:99205707-99206006	3	+	99205707	99205707	8553170	1	299,	0,
#Partially deleted in new
chr13	99215371	99215758	chr13:99215371-99215758	7	-	99215371	99215371	16724991	1	387,	0,
#Partially deleted in new
chr13	99244514	99386434	chr13:99244514-99386434	0	+	99244514	99244514	8553170	6	110,124,48,246,120,1207,	0,69582,73507,95805,123272,140713,
#Partially deleted in new
chr13	99254713	99258428	chr13:99254713-99258428	1	-	99254876	99255872	789624	2	1193,275,	0,3440,
#Partially deleted in new
chr13	99254713	99258428	chr13:99254713-99258428	1	-	99254876	99255872	789624	3	1193,192,275,	0,1614,3440,
#Partially deleted in new
chr13	99254731	99261744	chr13:99254731-99261744	3	-	99254876	99255872	789624	3	1175,433,90,	0,3422,6923,
#Partially deleted in new
chr13	99255578	99258374	chr13:99255578-99258374	0	-	99255578	99255872	789624	3	328,192,221,	0,749,2575,
#Partially deleted in new
chr13	99294529	99307405	chr13:99294529-99307405	3	-	99295059	99296145	789624	2	1634,66,	0,12810,
#Partially deleted in new
chr13	99307951	99385394	chr13:99307951-99385394	0	+	99307951	99307951	8553170	7	29,127,124,48,246,120,167,	0,731,6145,10070,32368,59835,77276,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	99312782	99386434	chr13:99312782-99386434	0	+	99312782	99312782	8553170	6	605,124,48,246,120,1207,	0,1314,5239,27537,55004,72445,
#Partially deleted in new
chr13	99314707	99385698	chr13:99314707-99385698	0	+	99314707	99314707	8553170	5	132,48,246,120,471,	0,3314,25612,53079,70520,
#Deleted in new
chr13	99356130	99356228	chr13:99356130-99356228	3	+	99356130	99356130	5263520	1	98,	0,
#Partially deleted in new
chr13	99367786	99377650	chr13:99367786-99377650	0	+	99367786	99376929	789624	2	120,733,	0,9131,
#Deleted in new
chr13	99372172	99372686	chr13:99372172-99372686	7	+	99372172	99372172	16724991	1	514,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	99404683	99417224	chr13:99404683-99417224	7	-	99404683	99404683	16724991	2	4376,168,	0,12373,
#Deleted in new
chr13	99407836	99408914	chr13:99407836-99408914	5	-	99407836	99407836	16724991	1	1078,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	99429210	99432702	chr13:99429210-99432702	3	-	99429210	99429210	8553170	3	718,154,316,	0,2188,3176,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	99446310	99501645	chr13:99446310-99501645	0	+	99501606	99501645	789624	5	184,130,148,188,627,	0,5785,12224,54286,54708,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	99486961	99496772	chr13:99486961-99496772	3	-	99486961	99486961	8553170	3	855,83,64,	0,9173,9747,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	99491467	99494143	chr13:99491467-99494143	0	-	99491467	99491467	8553170	1	2676,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	99491474	99496738	chr13:99491474-99496738	1	-	99491474	99491474	8553170	4	629,2043,83,41,	0,2300,4660,5223,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	99496417	99499306	chr13:99496417-99499306	1	-	99496417	99496417	8553170	3	127,88,621,	0,831,2268,
#Partially deleted in new
chr13	99498523	99501315	chr13:99498523-99501315	0	+	99498523	99498523	8553170	3	77,188,297,	0,2073,2495,
#Partially deleted in new
chr13	99498736	99501250	chr13:99498736-99501250	3	+	99498736	99498736	8553170	3	145,188,232,	0,1860,2282,
#Partially deleted in new
chr13	99498955	99563334	chr13:99498955-99563334	3	+	99501606	99562758	789624	19	514,188,759,68,94,128,130,125,112,80,109,133,120,58,160,152,112,172,644,	0,1641,2063,18658,21080,30511,37652,38783,40490,41758,42603,44907,48029,50209,53211,55348,56580,60407,63735,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	99499726	99501052	chr13:99499726-99501052	3	-	99499726	99499726	789624	2	214,658,	0,668,
#Partially deleted in new
chr13	99501416	99564006	chr13:99501416-99564006	1	+	99501606	99562758	789624	17	361,68,94,128,130,125,112,80,109,133,120,58,160,152,112,172,1316,	0,16197,18619,28050,35191,36322,38029,39297,40142,42446,45568,47748,50750,52887,54119,57946,61274,
#Deleted in new
chr13	99540510	99541736	chr13:99540510-99541736	0	+	99540510	99540510	8553170	2	283,178,	0,1048,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	99577111	99580368	chr13:99577111-99580368	3	+	99577111	99577111	789624	3	280,170,200,	0,1358,3057,
#Partially deleted in new
chr13	99582705	99583180	chr13:99582705-99583180	7	+	99582705	99582705	16724991	1	475,	0,
#Partially deleted in new
chr13	99606668	99897134	chr13:99606668-99897134	3	+	99606695	99891413	0	8	89,187,189,102,94,168,125,5817,	0,166155,252192,256322,258149,259571,264269,284649,
#Partially deleted in new
chr13	99606689	99891613	chr13:99606689-99891613	1	+	99606695	99891413	0	7	68,187,189,94,168,125,296,	0,166134,252171,258128,259550,264248,284628,
#Partially deleted in new
chr13	99606695	99892564	chr13:99606695-99892564	1	+	99606695	99891413	0	9	62,187,189,102,94,168,125,120,122,	0,166128,252165,256295,258122,259544,264242,284622,285747,
#Deleted in new
chr13	99643058	99643149	chr13:99643058-99643149	3	+	99643058	99643058	5263520	1	91,	0,
#Deleted in new
chr13	99690080	99690971	chr13:99690080-99690971	3	-	99690080	99690080	789624	2	276,419,	0,472,
#Partially deleted in new
chr13	99726246	99727491	chr13:99726246-99727491	3	-	99726246	99726246	8553170	2	359,262,	0,983,
#Partially deleted in new
chr13	99783856	99783983	chr13:99783856-99783983	3	-	99783856	99783856	8553170	1	127,	0,
#Partially deleted in new
chr13	99858860	99865238	chr13:99858860-99865238	0	+	99858860	99865072	789624	3	189,102,421,	0,4130,5957,
#Partially deleted in new
chr13	99858860	99865238	chr13:99858860-99865238	0	+	99858860	99865072	789624	2	189,421,	0,5957,
#Partially deleted in new
chr13	99866316	99892894	chr13:99866316-99892894	0	+	99866316	99891413	789624	4	91,125,120,50,	0,4621,25001,26528,
#Partially deleted in new
chr13	99871017	99891612	chr13:99871017-99891612	0	+	99871017	99891413	789624	3	45,129,295,	0,13959,20300,
#Deleted in new
chr13	99962963	99971909	chr13:99962963-99971909	3	-	99965376	99971675	789624	2	2856,1783,	0,7163,
#Deleted in new
chr13	99981771	99986773	chr13:99981771-99986773	3	+	99982064	99985682	789624	3	1368,164,1451,	0,3174,3551,
#Deleted in new
chr13	99984288	99985492	chr13:99984288-99985492	0	+	99984288	99984288	8553170	3	121,164,170,	0,657,1034,
#Deleted in new
chr13	99984688	99985492	chr13:99984688-99985492	0	+	99984688	99984688	8553170	3	49,164,170,	0,257,634,
#Deleted in new
chr13	99984788	99985474	chr13:99984788-99985474	0	+	99984788	99984788	8553170	2	321,152,	0,534,
#Deleted in new
chr13	99985493	99985904	chr13:99985493-99985904	0	+	99985493	99985493	8553170	2	179,39,	0,372,
#Deleted in new
chr13	99994898	99997909	chr13:99994898-99997909	3	-	99994898	99994898	789624	1	3011,	0,
#Deleted in new
chr13	100027768	100028174	chr13:100027768-100028174	7	-	100027768	100027768	16724991	1	406,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	100062295	100063601	chr13:100062295-100063601	7	-	100062295	100062295	16724991	1	1306,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	100086030	100088848	chr13:100086030-100088848	3	-	100086030	100086030	789624	2	697,216,	0,2602,
#Partially deleted in new
chr13	100089014	100530432	chr13:100089014-100530432	1	+	100089120	100530166	0	23	211,78,48,69,114,54,132,37,79,103,95,151,144,75,69,76,111,103,103,99,54,78,335,	0,13868,22826,22978,65964,68272,120317,146827,168580,173714,179674,184181,212445,213909,218177,220818,241546,251142,279457,336618,360237,438660,441083,
#Partially deleted in new
chr13	100089014	100530432	chr13:100089014-100530432	1	+	100089120	100530166	0	23	211,48,69,114,54,132,37,79,103,95,151,144,75,69,76,111,103,103,99,54,141,78,335,	0,22826,22978,65964,68272,120317,146827,168580,173714,179674,184181,212445,213909,218177,220818,241546,251142,279457,336618,360237,426412,438660,441083,
#Partially deleted in new
chr13	100089082	100530435	chr13:100089082-100530435	3	+	100089120	100530166	0	24	143,78,48,69,114,54,132,37,79,103,95,151,144,75,69,76,111,103,103,99,54,141,78,338,	0,13800,22758,22910,65896,68204,120249,146759,168512,173646,179606,184113,212377,213841,218109,220750,241478,251074,279389,336550,360169,426344,438592,441015,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr13	100089099	100530421	chr13:100089099-100530421	0	+	100089120	100104529	789624	21	126,78,97,48,69,114,54,132,37,79,103,95,151,111,103,103,99,54,141,78,324,	0,13783,15364,22741,22893,65879,68187,120232,146742,168495,173629,179589,184096,241461,251057,279372,336533,360152,426327,438575,440998,
#Partially deleted in new
chr13	100102898	100530435	chr13:100102898-100530435	0	+	100102898	100530166	789624	16	62,48,69,114,54,132,37,79,103,95,151,99,54,141,78,338,	0,8942,9094,52080,54388,106433,132943,154696,159830,165790,170297,322734,346353,412528,424776,427199,
#Partially deleted in new
chr13	100102898	100330672	chr13:100102898-100330672	0	+	100102898	100307226	789624	16	62,48,69,114,54,132,37,79,103,95,151,144,73,69,76,112,	0,8942,9094,52080,54388,106433,132943,154696,159830,165790,170297,198561,200025,204293,206934,227662,
#Partially deleted in new
chr13	100102898	100530435	chr13:100102898-100530435	0	+	100102898	100330596	789624	19	62,48,69,114,54,132,37,79,103,95,151,111,103,103,99,54,141,78,338,	0,8942,9094,52080,54388,106433,132943,154696,159830,165790,170297,227662,237258,265573,322734,346353,412528,424776,427199,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	100102898	100237497	chr13:100102898-100237497	0	+	100102898	100236701	789624	8	62,48,69,114,54,132,37,1017,	0,8942,9094,52080,54388,106433,132943,133582,
#Partially deleted in new
chr13	100102898	100530437	chr13:100102898-100530437	0	+	100102898	100530166	789624	21	62,48,69,114,54,132,37,79,103,95,151,69,76,111,103,103,99,54,141,78,340,	0,8942,9094,52080,54388,106433,132943,154696,159830,165790,170297,204293,206934,227662,237258,265573,322734,346353,412528,424776,427199,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	100149200	100161625	chr13:100149200-100161625	0	+	100149200	100149200	8553170	5	505,163,114,54,953,	0,5293,5778,8086,11472,
#Deleted in new
chr13	100150480	100151092	chr13:100150480-100151092	7	-	100150480	100150480	16724991	1	612,	0,
#Deleted in new
chr13	100198186	100198469	chr13:100198186-100198469	7	-	100198186	100198186	16724991	1	283,	0,
#Partially deleted in new
chr13	100293223	100425731	chr13:100293223-100425731	0	+	100293223	100425731	789624	5	31,111,103,103,99,	0,37337,46933,75248,132409,
#Partially deleted in new
chr13	100305775	100340259	chr13:100305775-100340259	0	+	100305775	100340259	789624	5	59,69,76,111,103,	0,1416,4057,24785,34381,
#Partially deleted in new
chr13	100368471	100530432	chr13:100368471-100530432	0	+	100368471	100530166	789624	5	103,99,54,78,335,	0,57161,80780,159203,161626,
#Partially deleted in new
chr13	100368498	100491817	chr13:100368498-100491817	0	+	100368498	100491673	789624	4	76,99,54,168,	0,57134,80753,123151,
#Partially deleted in new
chr13	100464439	100480285	chr13:100464439-100480285	3	-	100464439	100464439	8553170	5	131,62,142,114,25,	0,1698,8731,12889,15821,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	100479546	100481015	chr13:100479546-100481015	1	-	100479546	100479546	8553170	3	217,103,36,	0,714,1433,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	100479558	100481157	chr13:100479558-100481157	0	-	100479558	100479558	8553170	3	205,103,38,	0,702,1561,
#Deleted in new
chr13	100489967	100491817	chr13:100489967-100491817	0	+	100489967	100489967	8553170	1	1850,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	100515426	100530432	chr13:100515426-100530432	0	+	100515426	100530166	789624	4	141,48,78,335,	0,11870,12248,14671,
#Deleted in new
chr13	100530163	100533802	chr13:100530163-100533802	1	-	100532129	100532591	0	2	2438,240,	0,3399,
#Partially deleted in new
chr13	100530182	100583997	chr13:100530182-100583997	3	-	100532129	100532591	0	3	2419,212,173,	0,3380,53642,
#Deleted in new
chr13	100532494	100533669	chr13:100532494-100533669	0	-	100532494	100532591	789624	3	107,82,107,	0,792,1068,
#Partially deleted in new
chr13	100532494	100589528	chr13:100532494-100589528	0	-	100532494	100532591	789624	3	107,173,218,	0,51330,56816,
#Deleted in new
chr13	100532513	100533653	chr13:100532513-100533653	0	-	100532513	100532591	789624	2	88,367,	0,773,
#Partially deleted in new
chr13	100532513	100588731	chr13:100532513-100588731	0	-	100532513	100532591	789624	3	88,173,132,	0,51311,56086,
#Partially deleted in new
chr13	100535740	100580112	chr13:100535740-100580112	3	-	100535740	100535740	8553170	4	2146,93,60,68,	0,5955,43143,44304,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	100537364	100539567	chr13:100537364-100539567	3	+	100537364	100537364	8553170	1	2203,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	100537609	100539806	chr13:100537609-100539806	0	-	100537609	100537609	8553170	2	277,633,	0,1564,
#Partially deleted in new
chr13	100537609	100587146	chr13:100537609-100587146	0	-	100537609	100537609	8553170	3	277,173,462,	0,46215,49075,
#Deleted in new
chr13	100539900	100540248	chr13:100539900-100540248	7	-	100539900	100539900	16724991	1	348,	0,
#Partially deleted in new
chr13	100603926	100674879	chr13:100603926-100674879	3	-	100604993	100668740	789624	18	1216,70,113,115,142,108,80,132,172,203,165,93,101,88,217,116,216,136,	0,2431,8471,10389,21608,21858,22144,30878,31097,32605,33611,34003,38284,52454,59037,60294,64652,70817,
#Partially deleted in new
chr13	100603933	100674795	chr13:100603933-100674795	1	-	100604993	100670362	789624	19	1209,70,113,115,142,108,80,132,172,203,165,93,101,88,217,116,216,210,52,	0,2424,8464,10382,21601,21851,22137,30871,31090,32598,33604,33996,38277,52447,59030,60287,64645,66426,70810,
#Partially deleted in new
chr13	100604870	100674774	chr13:100604870-100674774	1	-	100604993	100668740	789624	16	272,70,113,115,142,108,80,132,172,203,165,93,101,88,216,31,	0,1487,7527,9445,20664,20914,21200,29934,30153,31661,32667,33059,37340,51510,63708,69873,
#Partially deleted in new
chr13	100623874	100624429	chr13:100623874-100624429	7	-	100623874	100623874	16724991	2	160,51,	0,504,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	100624909	100638808	chr13:100624909-100638808	0	-	100624909	100624909	8553170	7	767,108,80,132,172,203,1271,	0,875,1161,9895,10114,11622,12628,
#Partially deleted in new
chr13	100625452	100642311	chr13:100625452-100642311	0	-	100625452	100625452	8553170	9	224,108,80,132,172,203,165,93,101,	0,332,618,9352,9571,11079,12085,12477,16758,
#Partially deleted in new
chr13	100625534	100636608	chr13:100625534-100636608	0	-	100625534	100625534	8553170	5	142,108,80,391,77,	0,250,536,9270,10997,
#Deleted in new
chr13	100635064	100636632	chr13:100635064-100636632	0	-	100635064	100635064	8553170	3	131,101,101,	0,614,1467,
#Partially deleted in new
chr13	100663119	100674795	chr13:100663119-100674795	0	-	100664292	100668740	789624	5	61,116,139,216,52,	0,1101,2849,5459,11624,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	100668361	100670735	chr13:100668361-100670735	0	-	100668361	100668361	8553170	2	433,376,	0,1998,
#Partially deleted in new
chr13	100668578	100674879	chr13:100668578-100674879	0	-	100668578	100668740	789624	3	216,287,136,	0,1704,6165,
#Partially deleted in new
chr13	100668578	100675093	chr13:100668578-100675093	0	-	100668578	100670362	789624	3	216,210,154,	0,1781,6361,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	100708324	101059286	chr13:100708324-101059286	3	+	100708324	100708324	789624	8	69,72,133,120,86,290,483,1593,	0,32232,304893,316354,340955,346832,348625,349369,
#Partially deleted in new
chr13	100756550	100757059	chr13:100756550-100757059	7	-	100756550	100756550	16724991	1	509,	0,
#Partially deleted in new
chr13	100940861	100944364	chr13:100940861-100944364	3	-	100940861	100940861	8553170	2	271,190,	0,3313,
#Partially deleted in new
chr13	101053775	101416355	chr13:101053775-101416355	3	-	101055294	101399126	789624	44	1713,118,150,151,158,116,133,94,149,69,120,75,107,94,99,121,107,105,168,132,121,57,123,92,70,102,74,142,137,75,138,192,168,132,87,105,143,155,129,140,84,183,147,43,	0,4163,6042,8192,11628,14142,14919,19808,20738,22097,27751,29033,29316,29935,35887,36070,41798,47008,49396,50519,50754,51118,53711,53922,56843,57349,70832,89304,90984,122524,138141,175617,183979,204667,230157,238214,238448,291490,322924,323141,324794,341407,345243,362537,
#Partially deleted in new
chr13	101053796	101416474	chr13:101053796-101416474	0	-	101067575	101399126	8553170	45	1692,118,150,151,158,189,116,133,94,149,69,120,75,107,94,99,121,107,105,168,132,121,57,123,92,70,102,74,142,137,75,138,192,168,132,87,105,143,155,129,140,84,183,147,162,	0,4142,6021,8171,11607,13713,14121,14898,19787,20717,22076,27730,29012,29295,29914,35866,36049,41777,46987,49375,50498,50733,51097,53690,53901,56822,57328,70811,89283,90963,122503,138120,175596,183958,204646,230136,238193,238427,291469,322903,323120,324773,341386,345222,362516,
#Partially deleted in new
chr13	101116439	101143221	chr13:101116439-101143221	0	-	101116439	101116439	8553170	4	153,87,74,142,	0,480,8168,26640,
#Partially deleted in new
chr13	101142742	101416462	chr13:101142742-101416462	0	-	101142742	101142742	8553170	17	479,137,75,138,192,168,132,87,105,143,120,129,140,84,183,147,150,	0,2017,33557,49174,86650,95012,115700,141190,149247,149481,202558,233957,234174,235827,252440,256276,273570,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr13	101180372	101416492	chr13:101180372-101416492	0	-	101180372	101180372	8553170	15	965,138,192,168,132,87,105,143,155,129,140,84,183,147,57,	0,11544,49020,57382,78070,103560,111617,111851,164893,196327,196544,198197,214810,218646,236063,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	101368544	101399154	chr13:101368544-101399154	1	-	101368985	101399126	789624	6	454,129,140,84,183,136,	0,8155,8372,10025,26638,30474,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr13	101452592	101716443	chr13:101452592-101716443	1	+	101452833	101715654	789624	10	339,218,123,141,141,147,117,147,114,881,	0,1290,122831,126694,130623,145560,239992,254163,261845,262970,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr13	101452614	101716444	chr13:101452614-101716444	3	+	101452833	101715654	789624	11	317,218,147,123,141,141,147,117,147,114,882,	0,1268,115084,122809,126672,130601,145538,239970,254141,261823,262948,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr13	101452661	101716439	chr13:101452661-101716439	1	+	101454058	101715654	789624	13	270,46,104,15,127,123,141,141,147,117,147,114,877,	0,1221,1335,115037,115057,122762,126625,130554,145491,239923,254094,261776,262901,
#Partially deleted in new
chr13	101452666	101720856	chr13:101452666-101720856	1	+	101567805	101715654	789624	11	265,147,123,141,141,147,117,147,114,108,3358,	0,115032,122757,126620,130549,145486,239918,254089,261771,262896,264832,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr13	101489951	101716443	chr13:101489951-101716443	1	+	101489963	101715654	789624	10	49,147,123,141,141,147,117,147,114,881,	0,77747,85472,89335,93264,108201,202633,216804,224486,225611,
#Partially deleted in new
chr13	101598144	101718344	chr13:101598144-101718344	0	+	101598144	101715654	789624	6	155,117,147,114,108,846,	0,94440,108611,116293,117418,119354,
#Partially deleted in new
chr13	101598145	101692944	chr13:101598145-101692944	0	+	101598145	101598145	8553170	2	154,360,	0,94439,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	101710803	102401774	chr13:101710803-102401774	1	-	101722830	102401678	789624	5	12164,199,104,111,304,	0,15808,157921,164382,690667,
#Deleted in new
chr13	101717563	101723106	chr13:101717563-101723106	3	+	101717563	101717563	8553170	3	79,124,226,	0,4133,5317,
#Partially deleted in new
chr13	101722830	101916645	chr13:101722830-101916645	3	-	101722830	101916645	789624	5	137,199,104,111,193,	0,3781,145894,152355,193622,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	101778883	101779048	chr13:101778883-101779048	3	-	101778883	101778883	8553170	1	165,	0,
#Deleted in new
chr13	101801877	101802488	chr13:101801877-101802488	7	+	101801877	101801877	16724991	1	611,	0,
#Partially deleted in new
chr13	101868371	101875294	chr13:101868371-101875294	0	-	101868371	101868371	8553170	2	457,109,	0,6814,
#Deleted in new
chr13	101967641	101967746	chr13:101967641-101967746	3	-	101967641	101967641	5263520	1	105,	0,
#Deleted in new
chr13	102002124	102003310	chr13:102002124-102003310	7	+	102002124	102002124	16724991	1	1186,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	102016952	102017069	chr13:102016952-102017069	3	-	102016952	102016952	8553170	1	117,	0,
#Deleted in new
chr13	102045933	102046004	chr13:102045933-102046004	3	-	102045933	102045933	5263520	1	71,	0,
#Deleted in new
chr13	102263045	102263202	chr13:102263045-102263202	7	-	102263045	102263045	16724991	1	157,	0,
#Partially deleted in new
chr13	102292326	102394519	chr13:102292326-102394519	3	-	102292326	102292326	789624	4	1714,169,74,166,	0,74118,101431,102027,
#Deleted in new
chr13	102299789	102300272	chr13:102299789-102300272	3	-	102299789	102299789	8553170	1	483,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	102367538	102368045	chr13:102367538-102368045	1	+	102367538	102367538	8553170	2	103,191,	0,316,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	102367563	102373666	chr13:102367563-102373666	3	+	102367563	102367563	789624	2	78,243,	0,5860,
#Deleted in new
chr13	102394629	102395703	chr13:102394629-102395703	3	+	102394629	102394629	789624	1	1074,	0,
#Deleted in new
chr13	102401470	102402457	chr13:102401470-102402457	0	-	102401470	102401470	8553170	2	128,331,	0,656,
#Deleted in new
chr13	102589371	102589813	chr13:102589371-102589813	3	-	102589371	102589371	8553170	1	442,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	102593337	102593873	chr13:102593337-102593873	3	-	102593337	102593337	8553170	1	536,	0,
#Partially deleted in new
chr13	102597002	102678461	chr13:102597002-102678461	3	+	102597038	102678316	789624	29	201,129,96,105,125,164,155,77,128,100,149,116,169,158,77,107,155,117,101,97,138,245,79,152,97,131,208,120,235,	0,7790,17098,19393,21719,25874,30009,30845,32479,33093,36947,38584,39221,40079,41236,43267,46219,47554,47906,49291,50204,51904,52405,60053,66645,67792,77280,79293,81224,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr13	102597022	102679958	chr13:102597022-102679958	1	+	102597038	102678316	789624	30	181,129,96,105,125,164,155,77,128,100,149,116,169,158,77,107,155,117,101,97,138,245,79,39,152,97,131,208,120,1732,	0,7770,17078,19373,21699,25854,29989,30825,32459,33073,36927,38564,39201,40059,41216,43247,46199,47534,47886,49271,50184,51884,52385,54336,60033,66625,67772,77260,79273,81204,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	102597032	102608022	chr13:102597032-102608022	0	+	102597032	102597032	8553170	3	171,129,391,	0,7760,10599,
#Deleted in new
chr13	102626899	102627912	chr13:102626899-102627912	0	+	102626899	102626899	8553170	2	267,65,	0,948,
#Deleted in new
chr13	102627145	102631528	chr13:102627145-102631528	0	+	102627145	102627145	8553170	5	21,77,128,100,249,	0,702,2336,2950,4134,
#Partially deleted in new
chr13	102649054	102657125	chr13:102649054-102657125	0	+	102649054	102649054	8553170	2	432,70,	0,8001,
#Partially deleted in new
chr13	102654941	102678363	chr13:102654941-102678363	0	+	102654941	102654941	8553170	7	66,152,97,131,208,120,137,	0,2114,8706,9853,19341,21354,23285,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	102656981	102674411	chr13:102656981-102674411	0	+	102656981	102656981	8553170	5	226,97,142,126,129,	0,6666,7813,10776,17301,
#Partially deleted in new
chr13	102685743	102694504	chr13:102685743-102694504	3	-	102686030	102694498	0	4	682,118,152,136,	0,1196,5069,8625,
#Partially deleted in new
chr13	102729368	102759070	chr13:102729368-102759070	3	-	102729450	102758932	789624	4	21020,43,34,369,	0,29041,29174,29333,
#Deleted in new
chr13	102742989	102745224	chr13:102742989-102745224	3	+	102742989	102742989	8553170	2	644,1303,	0,932,
#Partially deleted in new
chr13	102765989	102770834	chr13:102765989-102770834	1	-	102766536	102770026	789624	5	591,52,231,75,157,	0,2270,3321,4022,4688,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	102766109	102770270	chr13:102766109-102770270	1	-	102766400	102769433	789624	4	471,206,52,960,	0,1163,2150,3201,
#Partially deleted in new
chr13	102766109	102773759	chr13:102766109-102773759	1	-	102766400	102769433	789624	5	471,206,52,231,78,	0,1163,2150,3201,7572,
#Partially deleted in new
chr13	102766109	102773755	chr13:102766109-102773755	1	-	102766536	102769433	789624	4	471,52,231,74,	0,2150,3201,7572,
#Partially deleted in new
chr13	102766109	102773811	chr13:102766109-102773811	1	-	102766536	102770026	789624	5	471,52,231,75,130,	0,2150,3201,3902,7572,
#Partially deleted in new
chr13	102766109	102773811	chr13:102766109-102773811	3	-	102766400	102770026	789624	6	471,206,52,231,75,130,	0,1163,2150,3201,3902,7572,
#Partially deleted in new
chr13	102768276	102773538	chr13:102768276-102773538	0	-	102768276	102768276	8553170	4	35,231,75,58,	0,1034,1735,5204,
#Partially deleted in new
chr13	102784280	102799007	chr13:102784280-102799007	3	-	102784494	102798670	0	10	232,108,90,210,238,173,78,206,206,519,	0,1951,3553,4731,6620,6977,9060,9320,12523,14208,
#Partially deleted in new
chr13	102784283	102798914	chr13:102784283-102798914	0	-	102784283	102784283	8553170	9	229,108,90,210,530,78,206,206,426,	0,1948,3550,4728,6617,9057,9317,12520,14205,
#Partially deleted in new
chr13	102784286	102791278	chr13:102784286-102791278	0	-	102784286	102784286	8553170	5	226,108,90,238,21,	0,1945,3547,6614,6971,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	102793152	102793678	chr13:102793152-102793678	0	-	102793152	102793152	8553170	2	266,78,	0,448,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr13	102799048	102841533	chr13:102799048-102841533	3	+	102807267	102839865	789624	11	473,84,600,127,96,105,95,133,87,97,1962,	0,6258,8097,17379,21988,22694,23016,32516,35417,39594,40523,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr13	102799048	102841535	chr13:102799048-102841535	1	+	102821118	102839865	789624	9	473,127,96,105,95,133,87,97,1985,	0,17379,21988,22694,23016,32516,35417,39594,40502,
#Partially deleted in new
chr13	102799109	102875994	chr13:102799109-102875994	3	+	102807267	102875903	789624	25	412,84,600,127,96,105,95,133,87,97,232,176,116,87,61,144,208,1074,245,120,214,145,201,85,688,	0,6197,8036,17318,21927,22633,22955,32455,35356,39533,40462,53008,54647,55178,56942,59165,62397,62920,66557,67152,67522,69003,73088,74149,76197,
#Partially deleted in new
chr13	102799321	102875991	chr13:102799321-102875991	1	+	102821118	102875903	789624	24	200,462,127,96,105,95,133,87,97,232,176,116,87,61,144,208,1074,245,120,214,145,201,85,685,	0,7962,17106,21715,22421,22743,32243,35144,39321,40250,52796,54435,54966,56730,58953,62185,62708,66345,66940,67310,68791,72876,73937,75985,
#Partially deleted in new
chr13	102800400	102807400	chr13:102800400-102807400	0	+	102800400	102800400	8553170	3	335,84,255,	0,4906,6745,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	102801493	102807323	chr13:102801493-102807323	0	+	102801493	102801493	8553170	2	274,178,	0,5652,
#Partially deleted in new
chr13	102807145	102876001	chr13:102807145-102876001	1	+	102807267	102875903	789624	23	600,127,96,105,95,133,87,97,232,176,116,87,61,144,208,1074,245,120,214,145,201,85,695,	0,9282,13891,14597,14919,24419,27320,31497,32426,44972,46611,47142,48906,51129,54361,54884,58521,59116,59486,60967,65052,66113,68161,
#Partially deleted in new
chr13	102807543	102816874	chr13:102807543-102816874	0	+	102807543	102807543	8553170	2	202,447,	0,8884,
#Partially deleted in new
chr13	102816488	102856101	chr13:102816488-102856101	0	+	102816488	102853794	789624	7	66,96,105,95,116,87,50,	0,4548,5254,5576,37268,37799,39563,
#Partially deleted in new
chr13	102816488	102853872	chr13:102816488-102853872	0	+	102816488	102849191	789624	7	66,96,105,95,77,176,116,	0,4548,5254,5576,32629,35629,37268,
#Partially deleted in new
chr13	102820386	102840163	chr13:102820386-102840163	0	+	102820386	102820386	8553170	7	746,105,95,133,87,97,592,	0,1356,1678,11178,14079,18256,19185,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr13	102844843	102876001	chr13:102844843-102876001	3	+	102846266	102875903	0	15	1511,176,116,87,61,144,208,1074,245,120,214,145,201,85,695,	0,7274,8913,9444,11208,13431,16663,17186,20823,21418,21788,23269,27354,28415,30463,
#Partially deleted in new
chr13	102845840	102858937	chr13:102845840-102858937	1	+	102846266	102858937	0	7	514,176,116,87,61,144,27,	0,6277,7916,8447,10211,12434,13070,
#Partially deleted in new
chr13	102846048	102853872	chr13:102846048-102853872	0	+	102846266	102852124	789624	4	266,77,176,116,	0,3069,6069,7708,
#Partially deleted in new
chr13	102846111	102853933	chr13:102846111-102853933	0	+	102846111	102846111	8553170	3	243,176,177,	0,6006,7645,
#Partially deleted in new
chr13	102864717	102875983	chr13:102864717-102875983	1	+	102866363	102875903	0	6	1664,214,145,201,85,677,	0,1914,3395,7480,8541,10589,
#Deleted in new
chr13	102865942	102868257	chr13:102865942-102868257	0	+	102865942	102865942	8553170	3	439,214,145,	0,689,2170,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	102874734	102875892	chr13:102874734-102875892	0	+	102874734	102874734	8553170	2	124,586,	0,572,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	102880098	102896033	chr13:102880098-102896033	7	+	102880098	102880098	16724991	4	114,80,1365,753,	0,989,11237,15182,
#Deleted in new
chr13	102888857	102889834	chr13:102888857-102889834	3	+	102888857	102888857	8553170	1	977,	0,
#Partially deleted in new
chr13	102891310	102895685	chr13:102891310-102895685	5	+	102891310	102891310	16724991	3	190,118,405,	0,1272,3970,
#Deleted in new
chr13	102903338	102904000	chr13:102903338-102904000	3	+	102903338	102903338	8553170	1	662,	0,
#Partially deleted in new
chr13	103043997	103066846	chr13:103043997-103066846	3	-	103046132	103066249	789624	6	2263,158,176,89,119,974,	0,5291,7259,8622,14266,21875,
#Partially deleted in new
chr13	103343659	103396450	chr13:103343659-103396450	3	+	103343659	103343659	8553170	3	55,162,1695,	0,48567,51096,
#Deleted in new
chr13	103425199	103427685	chr13:103425199-103427685	3	+	103425199	103425199	789624	2	122,370,	0,2116,
#Deleted in new
chr13	103444619	103444968	chr13:103444619-103444968	7	-	103444619	103444619	16724991	1	349,	0,
#Deleted in new
chr13	104814326	104815069	chr13:104814326-104815069	7	+	104814326	104814326	16724991	1	743,	0,
#Deleted in new
chr13	105459814	105460015	chr13:105459814-105460015	3	+	105459814	105459814	8553170	1	201,	0,
#Deleted in new
chr13	105462301	105462505	chr13:105462301-105462505	3	+	105462301	105462301	8553170	1	204,	0,
#Partially deleted in new
chr13	105465866	105491034	chr13:105465866-105491034	0	+	105472617	105490081	789624	6	194,117,135,148,292,123,	0,349,1140,6671,24034,25045,
#Partially deleted in new
chr13	105466014	105491000	chr13:105466014-105491000	0	+	105472617	105490081	789624	5	318,135,148,292,89,	0,992,6523,23886,24897,
#Partially deleted in new
chr13	105466017	105491000	chr13:105466017-105491000	0	+	105466288	105489906	789624	6	315,89,148,94,292,89,	0,1035,6520,8959,23883,24894,
#Partially deleted in new
chr13	105466044	105491030	chr13:105466044-105491030	0	+	105472617	105489906	789624	7	16,117,135,148,94,292,119,	0,171,962,6493,8932,23856,24867,
#Partially deleted in new
chr13	105466242	105491034	chr13:105466242-105491034	3	+	105466288	105490081	789624	5	90,89,148,292,123,	0,810,6295,23658,24669,
#Partially deleted in new
chr13	105466247	105490983	chr13:105466247-105490983	0	+	105466288	105472601	789624	5	85,89,143,292,72,	0,805,6295,23653,24664,
#Partially deleted in new
chr13	105466269	105490987	chr13:105466269-105490987	1	+	105472617	105490081	789624	4	63,135,148,1087,	0,737,6268,23631,
#Partially deleted in new
chr13	105466269	105490987	chr13:105466269-105490987	1	+	105472597	105490081	789624	5	63,135,148,401,76,	0,737,6268,23522,24642,
#Partially deleted in new
chr13	105466269	105490987	chr13:105466269-105490987	0	+	105466288	105489807	789624	5	63,89,148,401,76,	0,783,6268,23522,24642,
#Partially deleted in new
chr13	105466288	105490987	chr13:105466288-105490987	1	+	105466288	105490081	789624	4	44,89,148,1087,	0,764,6249,23612,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	105467108	105491000	chr13:105467108-105491000	0	+	105467108	105467668	789624	7	33,113,148,93,96,401,89,	0,501,5429,7868,10006,22683,23803,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	105690428	105702689	chr13:105690428-105702689	3	+	105690428	105690428	8553170	6	60,214,136,86,200,64,	0,3890,5069,7265,7555,12197,
#Partially deleted in new
chr13	105704279	105707611	chr13:105704279-105707611	0	+	105704279	105704279	8553170	2	197,512,	0,2820,
#Partially deleted in new
chr13	105705498	105707619	chr13:105705498-105707619	0	+	105705498	105705498	8553170	2	289,520,	0,1601,
#Partially deleted in new
chr13	105705921	105707618	chr13:105705921-105707618	0	+	105705921	105705921	8553170	2	71,519,	0,1178,
#Partially deleted in new
chr13	105706098	105707618	chr13:105706098-105707618	0	+	105706098	105706098	8553170	2	207,519,	0,1001,
#Partially deleted in new
chr13	105706628	105707619	chr13:105706628-105707619	0	+	105706628	105706628	8553170	2	98,520,	0,471,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	105706644	105762100	chr13:105706644-105762100	1	+	105706644	105706644	789624	4	273,530,124,838,	0,455,1069,54618,
#Partially deleted in new
chr13	105706898	105718550	chr13:105706898-105718550	0	+	105706898	105706898	8553170	2	731,76,	0,11576,
#Partially deleted in new
chr13	105707475	105764440	chr13:105707475-105764440	3	+	105707475	105707475	8553170	5	154,85,205,175,701,	0,10999,11172,53787,56264,
#Partially deleted in new
chr13	105718728	105731714	chr13:105718728-105731714	1	+	105718728	105718728	8553170	5	124,138,133,144,267,	0,9861,11098,11586,12719,
#Partially deleted in new
chr13	105726749	105731708	chr13:105726749-105731708	0	+	105726749	105726749	8553170	4	231,138,144,261,	0,1840,3565,4698,
#Partially deleted in new
chr13	105729500	105731708	chr13:105729500-105731708	0	+	105729500	105729500	8553170	3	459,144,261,	0,814,1947,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	105761328	105764242	chr13:105761328-105764242	0	+	105761328	105761328	8553170	2	232,503,	0,2411,
#Deleted in new
chr13	105897522	105897643	chr13:105897522-105897643	3	-	105897522	105897522	8553170	1	121,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	106155371	106155490	chr13:106155371-106155490	7	-	106155371	106155371	16724991	1	119,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	106374476	106377791	chr13:106374476-106377791	2	+	106374476	106374476	8553170	3	712,218,592,	0,2390,2723,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	106376513	106377795	chr13:106376513-106377795	0	+	106376513	106376513	8553170	3	43,218,596,	0,353,686,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	106376520	106378582	chr13:106376520-106378582	1	+	106376520	106376520	789624	3	145,218,1383,	0,346,679,
#Partially deleted in new
chr13	106376562	106378595	chr13:106376562-106378595	0	+	106376562	106376562	8553170	3	103,218,688,	0,304,1345,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	106376765	106377795	chr13:106376765-106377795	0	+	106376765	106376765	8553170	2	319,596,	0,434,
#Partially deleted in new
chr13	106425772	106426122	chr13:106425772-106426122	7	+	106425772	106425772	16724991	1	350,	0,
#Partially deleted in new
chr13	106489730	106535114	chr13:106489730-106535114	1	-	106493039	106534964	0	5	3698,114,93,284,272,	0,5150,6017,22798,45112,
#Partially deleted in new
chr13	106489744	106535662	chr13:106489744-106535662	3	-	106493039	106534964	0	5	3684,114,93,284,820,	0,5136,6003,22784,45098,
#Partially deleted in new
chr13	106489809	106516447	chr13:106489809-106516447	0	-	106489809	106489809	8553170	4	3619,114,93,10,	0,5071,5938,26628,
#Deleted in new
chr13	106491146	106495130	chr13:106491146-106495130	3	+	106491146	106491146	8553170	4	559,238,139,1836,	0,1120,1593,2148,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	106492147	106521630	chr13:106492147-106521630	1	+	106492147	106492147	8553170	3	357,139,5498,	0,592,23985,
#Partially deleted in new
chr13	106492793	106510200	chr13:106492793-106510200	0	+	106492793	106492793	8553170	2	85,382,	0,17025,
#Deleted in new
chr13	106506045	106506713	chr13:106506045-106506713	3	-	106506045	106506045	8553170	1	668,	0,
#Partially deleted in new
chr13	106541672	106568164	chr13:106541672-106568164	3	-	106543995	106567919	789624	4	2488,84,226,592,	0,15375,17759,25900,
#Partially deleted in new
chr13	106543326	106568137	chr13:106543326-106568137	0	-	106543326	106543326	8553170	3	834,2610,565,	0,13721,24246,
#Partially deleted in new
chr13	106543827	106561951	chr13:106543827-106561951	0	-	106543827	106543827	8553170	5	333,84,58,226,120,	0,13220,13731,15604,18004,
#Partially deleted in new
chr13	106557105	106567623	chr13:106557105-106567623	0	-	106557105	106557105	8553170	4	26,58,226,51,	0,453,2326,10467,
#Partially deleted in new
chr13	106617809	106631359	chr13:106617809-106631359	3	+	106617809	106617809	789624	4	224,748,123,573,	0,8577,10209,12977,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	106653915	106672163	chr13:106653915-106672163	3	+	106653915	106653915	789624	3	239,283,648,	0,14730,17600,
#Deleted in new
chr13	106663436	106663847	chr13:106663436-106663847	7	+	106663436	106663436	16724991	1	411,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	106773622	106774279	chr13:106773622-106774279	3	-	106773622	106773622	8553170	1	657,	0,
#Partially deleted in new
chr13	106863815	106864286	chr13:106863815-106864286	7	-	106863815	106863815	16724991	1	471,	0,
#Deleted in new
chr13	106903149	106904099	chr13:106903149-106904099	3	-	106903149	106903149	8553170	1	950,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	106941949	106942561	chr13:106941949-106942561	3	-	106941949	106941949	8553170	1	612,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	106955688	106961392	chr13:106955688-106961392	3	-	106955688	106955688	8553170	2	856,161,	0,5543,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	107163509	107866735	chr13:107163509-107866735	3	-	107170496	107866596	789624	3	7277,172,1054,	0,47074,702172,
#Deleted in new
chr13	107320894	107320963	chr13:107320894-107320963	3	-	107320894	107320894	5263520	1	69,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	107465983	107466674	chr13:107465983-107466674	3	-	107465983	107465983	8553170	1	691,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	107531170	107531248	chr13:107531170-107531248	3	-	107531170	107531170	5263520	1	78,	0,
#Partially deleted in new
chr13	107788341	107835451	chr13:107788341-107835451	3	-	107788341	107788341	8553170	2	769,50,	0,47060,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	107870382	107873372	chr13:107870382-107873372	3	+	107870382	107870382	8553170	1	2990,	0,
#Partially deleted in new
chr13	108207438	108218368	chr13:108207438-108218368	3	-	108208532	108211268	0	2	3858,207,	0,10723,
#Partially deleted in new
chr13	108207438	108215534	chr13:108207438-108215534	1	-	108208532	108211268	0	3	3858,73,51,	0,7099,8045,
#Partially deleted in new
chr13	108207438	108215535	chr13:108207438-108215535	1	-	108208532	108211268	0	3	3858,270,52,	0,7099,8045,
#Partially deleted in new
chr13	108207445	108214782	chr13:108207445-108214782	1	-	108208532	108211268	0	2	3851,245,	0,7092,
#Partially deleted in new
chr13	108207445	108215523	chr13:108207445-108215523	1	-	108208532	108211067	789624	3	3771,73,40,	0,7092,8038,
#Partially deleted in new
chr13	108218378	108234255	chr13:108218378-108234255	3	+	108229218	108230232	789624	2	281,5057,	0,10820,
#Partially deleted in new
chr13	108251239	108270417	chr13:108251239-108270417	0	+	108251239	108251239	8553170	2	77,318,	0,18860,
#Deleted in new
chr13	108267319	108267734	chr13:108267319-108267734	3	+	108267319	108267319	8553170	1	415,	0,
#Partially deleted in new
chr13	108269628	108308484	chr13:108269628-108308484	1	+	108269895	108306938	0	5	606,85,113,151,1659,	0,711,33624,33825,37197,
#Partially deleted in new
chr13	108269717	108308484	chr13:108269717-108308484	3	+	108269895	108306938	0	6	517,85,57,113,151,1659,	0,622,17085,33535,33736,37108,
#Partially deleted in new
chr13	108269895	108303467	chr13:108269895-108303467	1	+	108269895	108303467	0	4	339,85,57,14,	0,444,16907,33558,
#Partially deleted in new
chr13	108270226	108303604	chr13:108270226-108303604	0	+	108270226	108270226	8553170	5	198,57,118,113,151,	0,16576,32549,33026,33227,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	108301211	108301331	chr13:108301211-108301331	7	-	108301211	108301211	16724991	1	120,	0,
#Deleted in new
chr13	108303305	108307033	chr13:108303305-108307033	0	+	108303305	108303305	8553170	2	299,208,	0,3520,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	108335353	108432684	chr13:108335353-108432684	1	+	108335353	108335353	8553170	5	219,65,125,66,1214,	0,29865,30317,33894,96117,
#Deleted in new
chr13	108335402	108336497	chr13:108335402-108336497	0	+	108335402	108335402	8553170	2	170,410,	0,685,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	108335447	108448316	chr13:108335447-108448316	3	+	108335447	108335447	8553170	4	125,66,142,1135,	0,33800,39123,111734,
#Deleted in new
chr13	108480225	108481817	chr13:108480225-108481817	7	+	108480225	108480225	16724991	1	1592,	0,
#Partially deleted in new
chr13	108596151	109208007	chr13:108596151-109208007	3	+	108665923	109206836	789624	35	88,264,71,144,109,125,126,76,154,151,111,66,128,106,118,148,112,118,72,142,73,153,201,76,176,81,206,103,97,247,269,1113,159,92,1399,	0,69734,116509,131288,189483,197364,210527,224185,226973,248191,259291,270025,286907,292220,301864,313851,361536,365387,366272,368609,396224,412745,423559,450764,456148,458894,459238,504633,524218,528960,531130,544112,568749,583390,610457,
#Partially deleted in new
chr13	108629222	109208007	chr13:108629222-109208007	1	+	108629844	109206836	789624	35	650,264,71,144,109,125,126,76,154,151,111,66,128,106,118,148,112,118,72,142,73,153,201,76,176,81,206,103,97,247,269,1113,159,92,1399,	0,36663,83438,98217,156412,164293,177456,191114,193902,215120,226220,236954,253836,259149,268793,280780,328465,332316,333201,335538,363153,379674,390488,417693,423077,425823,426167,471562,491147,495889,498059,511041,535678,550319,577386,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr13	108665882	109048982	chr13:108665882-109048982	1	+	108665923	109048354	789624	24	267,71,144,109,125,126,76,154,151,111,66,128,106,118,148,112,118,72,142,73,153,201,76,645,	0,46778,61557,119752,127633,140796,154454,157242,178460,189560,200294,217176,222489,232133,244120,291805,295656,296541,298878,326493,343014,353828,381033,382455,
#Partially deleted in new
chr13	108665882	109207997	chr13:108665882-109207997	1	+	108665923	109206836	789624	34	267,71,144,109,125,126,76,154,151,111,66,128,106,118,148,112,118,72,142,73,153,201,76,176,81,206,103,97,247,269,1113,159,92,1389,	0,46778,61557,119752,127633,140796,154454,157242,178460,189560,200294,217176,222489,232133,244120,291805,295656,296541,298878,326493,343014,353828,381033,386417,389163,389507,434902,454487,459229,461399,474381,499018,513659,540726,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	108779541	108785740	chr13:108779541-108785740	0	+	108779541	108779541	8553170	2	511,106,	0,6093,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr13	108793579	109056057	chr13:108793579-109056057	0	+	108793579	108793579	8553170	22	61,126,76,154,151,111,66,128,106,118,148,112,118,72,142,73,153,201,76,176,81,668,	0,13099,26757,29545,50763,61863,72597,89479,94792,104436,116423,164108,167959,168844,171181,198796,215317,226131,253336,258720,261466,261810,
#Partially deleted in new
chr13	108855295	108888477	chr13:108855295-108888477	0	+	108855295	108855295	8553170	5	64,111,66,128,106,	0,147,10881,27763,33076,
#Deleted in new
chr13	109101260	109101919	chr13:109101260-109101919	3	-	109101260	109101260	8553170	2	97,339,	0,320,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	109163901	109201483	chr13:109163901-109201483	3	-	109163901	109163901	789624	4	190,75,286,29,	0,2734,3117,37553,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	109269633	109273838	chr13:109269633-109273838	1	+	109269633	109269633	8553170	1	4205,	0,
#Partially deleted in new
chr13	109272202	109278512	chr13:109272202-109278512	3	+	109272202	109272202	8553170	2	217,882,	0,5428,
#Partially deleted in new
chr13	109281972	109287733	chr13:109281972-109287733	0	+	109281972	109281972	8553170	2	305,393,	0,5368,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	109282192	109297690	chr13:109282192-109297690	3	+	109282192	109282192	8553170	5	85,61,175,96,513,	0,4164,5148,5510,14985,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	109310134	109311773	chr13:109310134-109311773	3	+	109310134	109310134	8553170	2	105,559,	0,1080,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	109400695	109401641	chr13:109400695-109401641	3	+	109400695	109400695	789624	2	113,301,	0,645,
#Partially deleted in new
chr13	109478738	109731700	chr13:109478738-109731700	3	-	109478738	109478738	8553170	4	582,90,85,758,	0,81662,92335,252204,
#Deleted in new
chr13	109728281	109730007	chr13:109728281-109730007	3	+	109728281	109728281	789624	3	264,160,50,	0,751,1676,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	109752697	109786568	chr13:109752697-109786568	3	-	109756303	109786053	0	2	3611,4527,	0,29344,
#Partially deleted in new
chr13	109785830	109808252	chr13:109785830-109808252	3	+	109785830	109785830	8553170	3	115,139,264,	0,21226,22158,
#Deleted in new
chr13	109805316	109805868	chr13:109805316-109805868	3	+	109805316	109805316	8553170	1	552,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	109915095	109915420	chr13:109915095-109915420	3	+	109915095	109915095	8553170	1	325,	0,
#Deleted in new
chr13	109984857	109986565	chr13:109984857-109986565	3	-	109984857	109984857	8553170	1	1708,	0,
#Partially deleted in new
chr13	109988096	110057331	chr13:109988096-110057331	3	-	109988096	109988096	8553170	3	148,202,206,	0,44511,69029,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	110031100	110031567	chr13:110031100-110031567	3	-	110031100	110031100	8553170	1	467,	0,
#Partially deleted in new
chr13	110036196	110057286	chr13:110036196-110057286	1	-	110036196	110036196	8553170	2	775,161,	0,20929,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	110053284	110054952	chr13:110053284-110054952	3	+	110053284	110053284	789624	4	27,63,169,180,	0,566,729,1488,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	110097850	110098151	chr13:110097850-110098151	3	-	110097850	110097850	8553170	1	301,	0,
#Deleted in new
chr13	110123207	110125234	chr13:110123207-110125234	3	+	110123207	110123207	8553170	1	2027,	0,
#Partially deleted in new
chr13	110148962	110307233	chr13:110148962-110307233	3	-	110150362	110307027	0	52	1482,173,115,178,213,99,129,72,73,134,186,51,99,81,127,140,90,99,153,90,168,114,151,98,105,93,169,192,71,84,96,165,36,85,42,54,45,51,27,87,42,36,63,84,27,54,63,45,45,90,60,290,	0,3371,6320,12229,13267,14500,15899,17269,18195,20666,21584,23757,24937,25483,25660,26255,27461,27663,27922,28879,29101,29960,30308,32329,34030,34221,37422,38175,43251,43867,46060,49504,51891,52475,54603,56390,56531,57702,57902,58440,59886,60429,61017,61166,62684,62906,63454,63611,64819,64963,93712,157981,
#Partially deleted in new
chr13	110149064	110165179	chr13:110149064-110165179	0	-	110149064	110149064	8553170	7	1380,173,115,178,213,99,318,	0,3269,6218,12127,13165,14398,15797,
#Partially deleted in new
chr13	110149110	110169660	chr13:110149110-110169660	0	-	110150362	110169660	8553170	10	1334,167,115,178,213,99,129,72,73,32,	0,3229,6172,12081,13119,14352,15751,17121,18047,20518,
#Deleted in new
chr13	110161017	110163490	chr13:110161017-110163490	0	-	110161017	110161017	8553170	3	352,213,28,	0,1212,2445,
#Deleted in new
chr13	110161957	110163558	chr13:110161957-110163558	0	-	110161957	110161957	8553170	2	485,96,	0,1505,
#Partially deleted in new
chr13	110178866	110307157	chr13:110178866-110307157	0	-	110178866	110178866	8553170	31	170,151,98,105,93,169,192,71,84,96,165,36,85,42,54,45,51,27,87,42,36,63,84,27,54,63,45,45,90,60,214,	0,404,2425,4126,4317,7518,8271,13347,13963,16156,19600,21987,22571,24699,26486,26627,27798,27998,28536,29982,30525,31113,31262,32780,33002,33550,33707,34915,35059,63808,128077,
#Partially deleted in new
chr13	110190740	110307131	chr13:110190740-110307131	1	-	110191625	110307027	0	25	909,71,84,96,165,36,85,42,54,45,51,27,87,42,36,63,84,27,54,63,45,45,90,60,188,	0,1473,2089,4282,7726,10113,10697,12825,14612,14753,15924,16124,16662,18108,18651,19239,19388,20906,21128,21676,21833,23041,23185,51934,116203,
#Partially deleted in new
chr13	110197536	110242697	chr13:110197536-110242697	0	-	110198386	110242697	8553170	20	1095,36,85,42,54,45,51,27,87,42,36,63,84,27,54,63,45,45,90,23,	0,3317,3901,6029,7816,7957,9128,9328,9866,11312,11855,12443,12592,14110,14332,14880,15037,16245,16389,45138,
#Partially deleted in new
chr13	110204648	110212436	chr13:110204648-110212436	0	-	110204648	110204648	8553170	12	758,45,51,27,87,42,36,63,84,27,54,20,	0,845,2016,2216,2754,4200,4743,5331,5480,6998,7220,7768,
#Partially deleted in new
chr13	110205496	110298899	chr13:110205496-110298899	0	-	110205496	110213967	789624	16	42,51,27,87,42,36,63,84,27,54,63,45,45,90,60,295,	0,1168,1368,1906,3352,3895,4483,4632,6150,6372,6920,7077,8285,8429,37178,93108,
#Partially deleted in new
chr13	110209790	110242697	chr13:110209790-110242697	0	-	110209790	110209790	8553170	7	252,84,833,45,45,90,23,	0,338,1856,2783,3991,4135,32884,
#Partially deleted in new
chr13	110209888	110242697	chr13:110209888-110242697	0	-	110209940	110242697	8553170	9	154,84,27,54,63,45,45,90,23,	0,240,1758,1980,2528,2685,3893,4037,32786,
#Partially deleted in new
chr13	110209888	110242697	chr13:110209888-110242697	0	-	110210113	110242697	8553170	8	324,27,54,63,45,45,90,23,	0,1758,1980,2528,2685,3893,4037,32786,
#Deleted in new
chr13	110211648	110212586	chr13:110211648-110212586	0	-	110211648	110211648	8553170	3	274,63,13,	0,768,925,
#Partially deleted in new
chr13	110235700	110242698	chr13:110235700-110242698	0	-	110237249	110242698	8553170	2	1564,24,	0,6974,
#Partially deleted in new
chr13	110235706	110242698	chr13:110235706-110242698	0	-	110237249	110242698	8553170	2	1573,24,	0,6968,
#Partially deleted in new
chr13	110237307	110242694	chr13:110237307-110242694	0	-	110237428	110242694	8553170	2	193,20,	0,5367,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	110240817	110242697	chr13:110240817-110242697	0	-	110242635	110242697	8553170	1	1880,	0,
#Deleted in new
chr13	110265250	110266113	chr13:110265250-110266113	3	-	110265250	110265250	8553170	1	863,	0,
#Partially deleted in new
chr13	110305811	110424861	chr13:110305811-110424861	0	+	110307903	110424861	789624	5	132,88,55,81,128,	0,2048,2257,51660,118922,
#Partially deleted in new
chr13	110307235	110513209	chr13:110307235-110513209	3	+	110307903	110512191	0	48	293,88,55,81,135,45,117,72,36,63,36,42,99,36,51,45,54,67,111,150,93,164,73,107,202,60,57,108,222,162,171,144,123,182,64,75,108,108,72,126,117,162,99,147,117,192,287,1276,	0,624,833,50236,117498,117717,121231,122649,123165,123309,125089,127165,129033,130766,131382,132553,138593,139562,142443,143069,150107,151535,154878,155042,158169,158767,159804,161981,165693,170767,172984,175280,177669,178419,182209,182475,183997,184834,185975,188106,194432,195885,196147,196611,196912,199179,200699,204698,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	110307257	110362215	chr13:110307257-110362215	1	+	110307903	110357612	8553170	4	271,88,55,4744,	0,602,811,50214,
#Partially deleted in new
chr13	110307266	110328549	chr13:110307266-110328549	0	+	110307266	110307266	8553170	4	262,88,55,180,	0,593,802,21103,
#Partially deleted in new
chr13	110307356	110448678	chr13:110307356-110448678	1	+	110307903	110446872	8553170	18	172,88,55,81,135,45,117,72,36,63,36,42,99,36,51,45,54,1881,	0,503,712,50115,117377,117596,121110,122528,123044,123188,124968,127044,128912,130645,131261,132432,138472,139441,
#Deleted in new
chr13	110340957	110341029	chr13:110340957-110341029	3	+	110340957	110340957	5263520	1	72,	0,
#Partially deleted in new
chr13	110424801	110429842	chr13:110424801-110429842	0	+	110424801	110428634	8553170	3	67,45,1376,	0,151,3665,
#Deleted in new
chr13	110430050	110431007	chr13:110430050-110431007	0	+	110430050	110430050	8553170	2	386,463,	0,494,
#Partially deleted in new
chr13	110436285	110459771	chr13:110436285-110459771	0	+	110436285	110459015	789624	10	82,36,51,45,54,67,111,150,93,1001,	0,1716,2332,3503,9543,10512,13393,14019,21057,22485,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	110456395	110463287	chr13:110456395-110463287	3	-	110456395	110456395	8553170	5	961,63,37,196,265,	0,1129,1287,1695,6627,
#Deleted in new
chr13	110462021	110462449	chr13:110462021-110462449	0	+	110462021	110462021	8553170	2	165,172,	0,256,
#Partially deleted in new
chr13	110467081	110473594	chr13:110467081-110473594	0	+	110467081	110473486	8553170	4	15,108,222,128,	0,2135,5847,6385,
#Partially deleted in new
chr13	110477922	110513027	chr13:110477922-110513027	0	+	110477922	110477922	8553170	19	242,171,144,123,182,64,75,108,108,72,126,117,162,99,147,117,192,287,1094,	0,2297,4593,6982,7732,11522,11788,13310,14147,15288,17419,23745,25198,25460,25924,26225,28492,30012,34011,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	110477947	110484107	chr13:110477947-110484107	0	+	110477947	110477947	8553170	3	217,171,1592,	0,2272,4568,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	110502574	110508179	chr13:110502574-110508179	3	-	110502574	110502574	789624	3	354,105,81,	0,5072,5524,
#Partially deleted in new
chr13	110503696	110507988	chr13:110503696-110507988	0	+	110503696	110503696	8553170	5	70,147,117,192,54,	0,150,451,2718,4238,
#Partially deleted in new
chr13	110503750	110506571	chr13:110503750-110506571	0	+	110503750	110503750	8553170	3	243,117,157,	0,397,2664,
#Deleted in new
chr13	110503975	110504595	chr13:110503975-110504595	0	+	110503975	110504272	8553170	2	18,448,	0,172,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	110506467	110508330	chr13:110506467-110508330	0	+	110506467	110508296	8553170	2	139,396,	0,1467,
#Partially deleted in new
chr13	110507443	110512133	chr13:110507443-110512133	0	+	110507443	110507443	8553170	3	192,287,200,	0,491,4490,
#Deleted in new
chr13	110511364	110513027	chr13:110511364-110513027	0	+	110511364	110511364	8553170	1	1663,	0,
#Partially deleted in new
chr13	110523065	110561733	chr13:110523065-110561733	3	-	110523664	110561519	789624	2	1132,386,	0,38282,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	110613081	110616353	chr13:110613081-110616353	3	-	110613081	110613081	8553170	1	3272,	0,
#Partially deleted in new
chr13	110615459	110639993	chr13:110615459-110639993	1	+	110615591	110638528	789624	7	188,109,51,105,121,121,1616,	0,11979,19085,19212,20008,21669,22918,
#Partially deleted in new
chr13	110615590	110639993	chr13:110615590-110639993	0	+	110615590	110615590	789624	9	57,151,46,109,51,105,121,121,1616,	0,6625,8643,11848,18954,19081,19877,21538,22787,
#Partially deleted in new
chr13	110615660	110639993	chr13:110615660-110639993	3	+	110615674	110638521	789624	10	114,151,46,89,109,51,105,121,121,1752,	0,6555,8573,9529,11778,18884,19011,19807,21468,22581,
#Partially deleted in new
chr13	110641411	110663861	chr13:110641411-110663861	0	-	110641411	110641411	8553170	8	197,207,118,222,124,139,67,411,	0,903,2653,2973,4555,5689,9622,22039,
#Partially deleted in new
chr13	110641411	110645633	chr13:110641411-110645633	0	-	110641411	110641411	8553170	2	197,3319,	0,903,
#Partially deleted in new
chr13	110641416	110706157	chr13:110641416-110706157	3	-	110641536	110706093	789624	15	192,207,99,124,139,67,68,134,130,84,106,72,118,51,288,	0,898,2968,4550,5684,9617,22034,25923,35557,41634,46304,46530,60021,64104,64453,
#Partially deleted in new
chr13	110641416	110663775	chr13:110641416-110663775	0	-	110641416	110641416	8553170	6	192,1868,99,124,139,325,	0,898,2968,4550,5684,22034,
#Partially deleted in new
chr13	110641418	110663530	chr13:110641418-110663530	0	-	110641418	110641418	8553170	6	190,207,99,1273,464,80,	0,896,2966,4548,9218,22032,
#Partially deleted in new
chr13	110641418	110665750	chr13:110641418-110665750	0	-	110641418	110641418	8553170	9	190,207,118,99,1273,980,67,68,223,	0,896,2646,2966,4548,6899,9615,22032,24109,
#Partially deleted in new
chr13	110641442	110683139	chr13:110641442-110683139	0	-	110641442	110641442	8553170	10	166,207,99,124,139,67,68,134,130,89,	0,872,2942,4524,5658,9591,22008,25897,35531,41608,
#Partially deleted in new
chr13	110641583	110644681	chr13:110641583-110644681	0	-	110641583	110641583	8553170	4	25,207,118,297,	0,731,2481,2801,
#Partially deleted in new
chr13	110641586	110663518	chr13:110641586-110663518	0	-	110644149	110663518	789624	8	22,207,118,99,124,139,67,68,	0,728,2478,2798,4380,5514,9447,21864,
#Deleted in new
chr13	110642386	110646073	chr13:110642386-110646073	0	-	110642386	110642386	8553170	2	111,107,	0,3580,
#Deleted in new
chr13	110642446	110646278	chr13:110642446-110646278	0	-	110642446	110642446	8553170	3	75,99,312,	0,1938,3520,
#Partially deleted in new
chr13	110642510	110665730	chr13:110642510-110665730	0	-	110642510	110642510	8553170	7	11,99,124,139,67,68,203,	0,1874,3456,4590,8523,20940,23017,
#Deleted in new
chr13	110643752	110647115	chr13:110643752-110647115	0	-	110644149	110647115	789624	4	430,99,124,15,	0,632,2214,3348,
#Partially deleted in new
chr13	110643955	110713603	chr13:110643955-110713603	0	-	110643955	110643955	8553170	15	25,118,99,124,127,139,67,68,134,130,84,106,72,118,467,	0,109,429,2011,2549,3145,7078,19495,23384,33018,39095,43765,43991,57482,69181,
#Deleted in new
chr13	110644386	110646376	chr13:110644386-110646376	0	-	110644386	110644386	8553170	2	220,410,	0,1580,
#Partially deleted in new
chr13	110645929	110678093	chr13:110645929-110678093	0	-	110645929	110645929	8553170	7	161,139,67,68,134,130,171,	0,1171,5104,17521,21410,31044,31993,
#Partially deleted in new
chr13	110646466	110665737	chr13:110646466-110665737	0	-	110646466	110646466	8553170	3	773,68,210,	0,16984,19061,
#Partially deleted in new
chr13	110646678	110663628	chr13:110646678-110663628	0	-	110646678	110646678	8553170	2	561,178,	0,16772,
#Partially deleted in new
chr13	110646850	110665791	chr13:110646850-110665791	0	-	110646850	110646850	8553170	4	389,67,68,264,	0,4183,16600,18677,
#Partially deleted in new
chr13	110646860	110651207	chr13:110646860-110651207	0	-	110646860	110646860	8553170	2	379,174,	0,4173,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	110650246	110667458	chr13:110650246-110667458	0	-	110650246	110650246	8553170	3	854,68,119,	0,13204,17093,
#Partially deleted in new
chr13	110662837	110677024	chr13:110662837-110677024	0	-	110663026	110677024	789624	4	213,68,134,51,	0,613,4502,14136,
#Partially deleted in new
chr13	110667435	110706469	chr13:110667435-110706469	0	-	110667435	110667435	8553170	9	38,130,84,106,72,50,118,51,99,	0,9538,15615,20285,20511,30482,34002,38085,38935,
#Partially deleted in new
chr13	110676973	110706053	chr13:110676973-110706053	0	-	110697961	110706053	789624	8	130,84,106,72,50,118,51,184,	0,6077,10747,10973,20944,24464,28547,28896,
#Partially deleted in new
chr13	110676998	110713522	chr13:110676998-110713522	0	-	110676998	110676998	8553170	3	105,84,386,	0,6052,36138,
#Partially deleted in new
chr13	110677095	110706505	chr13:110677095-110706505	0	-	110677095	110677095	8553170	7	8,84,106,72,118,51,135,	0,5955,10625,10851,24342,28425,29275,
#Partially deleted in new
chr13	110687720	110713522	chr13:110687720-110713522	0	-	110687720	110687720	8553170	5	106,72,118,51,220,	0,226,13717,17800,25582,
#Partially deleted in new
chr13	110687721	110705797	chr13:110687721-110705797	0	-	110687721	110705768	789624	4	105,72,118,277,	0,225,13716,17799,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	110687731	110706133	chr13:110687731-110706133	0	-	110688832	110706093	789624	6	95,72,120,118,51,264,	0,215,1053,13706,17789,18138,
#Partially deleted in new
chr13	110687791	110712486	chr13:110687791-110712486	0	-	110687791	110687791	8553170	5	35,72,118,51,255,	0,155,13646,17729,24440,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	110701350	110705616	chr13:110701350-110705616	0	-	110701350	110701350	8553170	2	205,96,	0,4170,
#Partially deleted in new
chr13	110701501	110713601	chr13:110701501-110713601	0	-	110701501	110701501	8553170	3	54,51,465,	0,4019,11635,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	110705520	110713535	chr13:110705520-110713535	0	-	110705520	110705520	8553170	3	51,306,399,	0,1817,7616,
#Partially deleted in new
chr13	110712735	110720175	chr13:110712735-110720175	1	+	110712973	110719932	789624	2	242,947,	0,6493,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	110713277	110723339	chr13:110713277-110723339	3	+	110714149	110719932	789624	2	1008,4111,	0,5951,
#Partially deleted in new
chr13	110713459	110720175	chr13:110713459-110720175	1	+	110719299	110719932	789624	2	127,947,	0,5769,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	110714981	110721071	chr13:110714981-110721071	1	+	110715443	110719932	789624	2	1027,1843,	0,4247,
#Partially deleted in new
chr13	110715436	110719476	chr13:110715436-110719476	0	+	110715443	110719476	789624	2	92,248,	0,3792,
#Deleted in new
chr13	110762673	110763133	chr13:110762673-110763133	7	-	110762673	110762673	16724991	1	460,	0,
#Deleted in new
chr13	110809675	110813084	chr13:110809675-110813084	3	-	110809675	110809675	789624	1	3409,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	110863986	110870251	chr13:110863986-110870251	3	-	110863986	110863986	789624	1	6265,	0,
#Partially deleted in new
chr13	110878539	110915069	chr13:110878539-110915069	3	-	110879636	110914934	789624	6	1573,96,236,92,153,345,	0,5158,14488,27493,32078,36185,
#Partially deleted in new
chr13	110879767	110893082	chr13:110879767-110893082	0	-	110879767	110879767	8553170	3	345,241,55,	0,3785,13260,
#Partially deleted in new
chr13	110883194	110893132	chr13:110883194-110893132	0	-	110883533	110893132	789624	2	599,105,	0,9833,
#Partially deleted in new
chr13	110883708	110910746	chr13:110883708-110910746	0	-	110883708	110883708	8553170	6	85,236,94,109,92,129,	0,9319,10400,10576,22324,26909,
#Partially deleted in new
chr13	110892691	110915006	chr13:110892691-110915006	1	-	110893149	110914934	789624	5	572,94,92,153,282,	0,1417,13341,17926,22033,
#Partially deleted in new
chr13	110892956	110915037	chr13:110892956-110915037	0	-	110900630	110914934	789624	5	307,132,92,153,313,	0,7573,13076,17661,21768,
#Partially deleted in new
chr13	110893027	110900739	chr13:110893027-110900739	0	-	110893027	110893027	8553170	2	236,210,	0,7502,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	110893196	110914617	chr13:110893196-110914617	0	-	110893196	110893196	8553170	6	67,165,92,153,118,110,	0,7333,12836,17421,18457,21311,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	110894638	110899172	chr13:110894638-110899172	3	-	110894638	110894638	8553170	2	683,117,	0,4417,
#Deleted in new
chr13	110903474	110906095	chr13:110903474-110906095	0	-	110903474	110903474	8553170	2	65,63,	0,2558,
#Deleted in new
chr13	110904030	110906115	chr13:110904030-110906115	0	-	110904030	110904030	8553170	2	312,83,	0,2002,
#Partially deleted in new
chr13	110905022	110914803	chr13:110905022-110914803	0	-	110905022	110905022	8553170	4	211,92,153,79,	0,1010,5595,9702,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	110916003	110917827	chr13:110916003-110917827	3	+	110916003	110916003	8553170	1	1824,	0,
#Partially deleted in new
chr13	110936758	110939784	chr13:110936758-110939784	7	+	110936758	110936758	16724991	1	3026,	0,
#Deleted in new
chr13	110952721	110952811	chr13:110952721-110952811	7	-	110952721	110952721	16724991	1	90,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	110965703	110990579	chr13:110965703-110990579	7	+	110965703	110965703	16724991	4	416,52,121,600,	0,11223,17588,24276,
#Deleted in new
chr13	110989979	110990138	chr13:110989979-110990138	5	+	110989979	110989979	16724991	1	159,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	111095837	111103097	chr13:111095837-111103097	3	+	111095837	111095837	789624	3	57,193,400,	0,832,6860,
#Deleted in new
chr13	111113811	111115678	chr13:111113811-111115678	3	-	111113811	111113811	789624	2	1107,132,	0,1735,
#Partially deleted in new
chr13	111114558	111153962	chr13:111114558-111153962	0	+	111114558	111114558	8553170	2	499,58,	0,39346,
#Partially deleted in new
chr13	111114618	111293436	chr13:111114618-111293436	1	+	111115526	111292332	0	19	1073,87,85,131,202,89,95,96,123,139,60,147,87,79,140,225,94,90,1319,	0,39286,90670,95253,103060,118586,129253,129580,152929,159195,160112,160913,162968,165653,165919,168520,171528,173735,177499,
#Partially deleted in new
chr13	111115276	111295195	chr13:111115276-111295195	1	+	111115526	111292332	0	18	415,85,131,202,89,95,96,123,139,60,147,87,79,140,225,94,90,3078,	0,90012,94595,102402,117928,128595,128922,152271,158537,159454,160255,162310,164995,165261,167862,170870,173077,176841,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr13	111115276	111295195	chr13:111115276-111295195	1	+	111115526	111292332	0	20	415,87,63,85,131,202,89,95,96,123,139,60,147,87,79,140,225,94,90,3078,	0,38628,43750,90012,94595,102402,117928,128595,128922,152271,158537,159454,160255,162310,164995,165261,167862,170870,173077,176841,
#Deleted in new
chr13	111115418	111116575	chr13:111115418-111116575	0	+	111115418	111115418	8553170	2	273,220,	0,937,
#Partially deleted in new
chr13	111115427	111217880	chr13:111115427-111217880	0	+	111217681	111217880	789624	4	264,85,131,202,	0,89861,94444,102251,
#Partially deleted in new
chr13	111115452	111305727	chr13:111115452-111305727	1	+	111115526	111303113	789624	22	239,87,85,131,202,89,95,96,123,139,60,147,87,79,140,225,94,90,177,100,55,2737,	0,38452,89836,94419,102226,117752,128419,128746,152095,158361,159278,160079,162134,164819,165085,167686,170694,172901,176665,185295,186025,187538,
#Partially deleted in new
chr13	111122651	111144264	chr13:111122651-111144264	3	+	111122651	111122651	8553170	2	85,719,	0,20894,
#Deleted in new
chr13	111144304	111144733	chr13:111144304-111144733	3	-	111144304	111144304	8553170	2	272,49,	0,380,
#Partially deleted in new
chr13	111148195	111153171	chr13:111148195-111153171	3	-	111148195	111148195	8553170	2	510,801,	0,4175,
#Partially deleted in new
chr13	111153646	111217800	chr13:111153646-111217800	0	+	111217681	111217800	789624	6	75,87,85,81,131,122,	0,258,51642,55619,56225,64032,
#Partially deleted in new
chr13	111153688	111283226	chr13:111153688-111283226	0	+	111217681	111283226	789624	16	33,87,85,131,202,89,95,96,123,139,60,147,87,79,140,88,	0,216,51600,56183,63990,79516,90183,90510,113859,120125,121042,121843,123898,126583,126849,129450,
#Partially deleted in new
chr13	111153688	111283298	chr13:111153688-111283298	0	+	111217681	111265651	789624	13	33,87,85,202,89,227,61,123,60,147,87,140,160,	0,216,51600,63990,79516,111795,113138,113859,121042,121843,123898,126849,129450,
#Partially deleted in new
chr13	111153713	111305731	chr13:111153713-111305731	1	+	111217681	111303113	789624	21	278,85,131,202,89,95,96,123,139,60,147,87,79,140,225,94,90,177,100,55,2741,	0,51575,56158,63965,79491,90158,90485,113834,120100,121017,121818,123873,126558,126824,129425,132433,134640,138404,147034,147764,149277,
#Partially deleted in new
chr13	111153737	111305731	chr13:111153737-111305731	3	+	111217681	111303113	0	20	254,85,131,202,89,95,96,123,139,60,147,87,79,140,225,94,90,100,55,2741,	0,51551,56134,63941,79467,90134,90461,113810,120076,120993,121794,123849,126534,126800,129401,132409,134616,147010,147740,149253,
#Deleted in new
chr13	111182110	111182692	chr13:111182110-111182692	7	-	111182110	111182110	16724991	1	582,	0,
#Partially deleted in new
chr13	111184937	111217865	chr13:111184937-111217865	0	+	111217681	111217865	789624	4	288,85,131,187,	0,20351,24934,32741,
#Partially deleted in new
chr13	111186853	111305737	chr13:111186853-111305737	1	+	111217681	111303113	0	20	137,85,131,202,89,95,96,123,139,60,147,87,79,140,225,94,90,100,55,2747,	0,18435,23018,30825,46351,57018,57345,80694,86960,87877,88678,90733,93418,93684,96285,99293,101500,113894,114624,116137,
#Partially deleted in new
chr13	111203059	111217885	chr13:111203059-111217885	0	+	111203111	111217885	789624	4	58,85,131,207,	0,2229,6812,14619,
#Partially deleted in new
chr13	111205288	111295192	chr13:111205288-111295192	1	+	111217681	111292332	0	17	85,131,202,89,95,96,123,139,60,147,87,79,140,225,94,90,3075,	0,4583,12390,27916,38583,38910,62259,68525,69442,70243,72298,74983,75249,77850,80858,83065,86829,
#Partially deleted in new
chr13	111241144	111276031	chr13:111241144-111276031	0	+	111241144	111241144	8553170	7	192,95,96,123,139,60,500,	0,2727,3054,26403,32669,33586,34387,
#Partially deleted in new
chr13	111241219	111292458	chr13:111241219-111292458	1	+	111241282	111292332	789624	14	117,95,96,123,139,60,147,87,79,140,225,94,90,341,	0,2652,2979,26328,32594,33511,34312,36367,39052,39318,41919,44927,47134,50898,
#Deleted in new
chr13	111275650	111281109	chr13:111275650-111281109	0	+	111275650	111280734	789624	4	28,87,79,572,	0,1936,4621,4887,
#Deleted in new
chr13	111282827	111286236	chr13:111282827-111286236	0	+	111282827	111282827	8553170	2	536,90,	0,3319,
#Partially deleted in new
chr13	111316183	111344249	chr13:111316183-111344249	0	+	111316210	111339298	789624	7	74,92,111,145,70,176,167,	0,4673,11999,23110,23679,26572,27899,
#Partially deleted in new
chr13	111320667	111344247	chr13:111320667-111344247	3	+	111320890	111344123	789624	6	95,92,111,70,176,165,	0,189,7515,19195,22088,23415,
#Deleted in new
chr13	111588200	111589941	chr13:111588200-111589941	1	+	111588200	111588200	8553170	1	1741,	0,
#Partially deleted in new
chr13	111588290	111672608	chr13:111588290-111672608	3	+	111588290	111588290	8553170	4	54,124,54,211,	0,37696,56855,84107,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	111596008	111642079	chr13:111596008-111642079	3	+	111596008	111596008	5263520	2	39,335,	0,45736,
#Deleted in new
chr13	111899984	111901176	chr13:111899984-111901176	3	+	111899984	111899984	8553170	2	99,277,	0,915,
#Deleted in new
chr13	111899987	111900936	chr13:111899987-111900936	1	+	111899987	111899987	8553170	2	96,251,	0,698,
#Deleted in new
chr13	112052077	112052138	chr13:112052077-112052138	3	+	112052077	112052077	8553170	1	61,	0,
#Deleted in new
chr13	112067646	112070488	chr13:112067646-112070488	3	+	112067658	112068834	789624	1	2842,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	112083548	112085471	chr13:112083548-112085471	3	+	112083548	112083548	8553170	1	1923,	0,
#Deleted in new
chr13	112106094	112106882	chr13:112106094-112106882	3	-	112106094	112106094	8553170	2	144,284,	0,504,
#Deleted in new
chr13	112107118	112108015	chr13:112107118-112108015	3	+	112107118	112107118	789624	2	241,304,	0,593,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	112197349	112201000	chr13:112197349-112201000	3	+	112197349	112197349	789624	2	59,2770,	0,881,
#Partially deleted in new
chr13	112313466	112321758	chr13:112313466-112321758	3	+	112313466	112313466	789624	2	6250,647,	0,7645,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	112322566	112331225	chr13:112322566-112331225	3	-	112322566	112322566	789624	3	190,300,167,	0,4679,8492,
#Partially deleted in new
chr13	112376318	112434689	chr13:112376318-112434689	3	+	112376385	112434549	789624	7	161,57,90,108,96,78,205,	0,16702,21730,22747,24750,56125,58166,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	112376354	112399173	chr13:112376354-112399173	0	+	112382449	112399173	789624	6	125,89,230,57,90,108,	0,2288,5923,16666,21694,22711,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	112376387	112401096	chr13:112376387-112401096	0	+	112378679	112401096	789624	6	92,89,57,90,108,28,	0,2255,16633,21661,22678,24681,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	112382277	112434689	chr13:112382277-112434689	1	+	112382449	112434549	789624	6	230,90,108,96,78,205,	0,15771,16788,18791,50166,52207,
#Partially deleted in new
chr13	112485004	112588167	chr13:112485004-112588167	3	-	112485992	112587980	789624	22	1147,117,141,132,89,136,69,136,190,109,111,167,133,69,126,119,173,218,78,68,108,263,	0,4576,14040,19027,19621,31435,33970,34881,37315,41937,42369,60694,62615,63103,69052,69882,71047,73191,74317,80106,84147,102900,
#Partially deleted in new
chr13	112485032	112588205	chr13:112485032-112588205	0	-	112521770	112587980	8553170	23	1119,117,141,132,89,136,69,136,202,190,109,111,167,133,69,126,119,173,218,78,68,108,301,	0,4548,14012,18999,19593,31407,33942,34853,36630,37287,41909,42341,60666,62587,63075,69024,69854,71019,73163,74289,80078,84119,102872,
#Partially deleted in new
chr13	112485843	112489823	chr13:112485843-112489823	0	-	112485843	112485843	8553170	2	308,243,	0,3737,
#Partially deleted in new
chr13	112498806	112588125	chr13:112498806-112588125	1	-	112498909	112587980	789624	21	130,141,132,89,136,69,136,190,109,111,167,133,69,126,119,173,218,78,68,108,221,	0,238,5225,5819,17633,20168,21079,23513,28135,28567,46892,48813,49301,55250,56080,57245,59389,60515,66304,70345,89098,
#Partially deleted in new
chr13	112522319	112546203	chr13:112522319-112546203	0	-	112522319	112522319	8553170	4	190,109,111,505,	0,4622,5054,23379,
#Deleted in new
chr13	112544555	112548172	chr13:112544555-112548172	0	-	112545674	112548172	789624	3	1310,133,65,	0,3064,3552,
#Partially deleted in new
chr13	112546481	112588135	chr13:112546481-112588135	1	-	112547467	112587980	789624	10	1271,69,126,119,173,218,78,68,108,231,	0,1626,7575,8405,9570,11714,12840,18629,22670,41423,
#Partially deleted in new
chr13	112558195	112587346	chr13:112558195-112587346	0	-	112558195	112558195	8553170	6	218,78,68,108,123,117,	0,1126,6915,10956,25843,29034,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	112602827	112606417	chr13:112602827-112606417	3	-	112602827	112602827	8553170	1	3590,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	112647043	112684497	chr13:112647043-112684497	3	+	112647043	112647043	8553170	3	555,462,1224,	0,32133,36230,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	112686768	112689815	chr13:112686768-112689815	3	-	112686768	112686768	8553170	1	3047,	0,
#Partially deleted in new
chr13	112690328	112887168	chr13:112690328-112887168	1	+	112690416	112882064	789624	29	127,123,90,81,108,129,104,51,65,82,151,198,174,164,72,74,104,182,252,175,103,146,60,128,136,66,104,166,5353,	0,94806,114628,115884,120290,125754,128975,129571,133016,134015,135101,136365,141046,142531,144260,145849,151947,160708,163950,165582,167489,167816,169064,169958,172111,181406,183244,185447,191487,
#Partially deleted in new
chr13	112690328	112887168	chr13:112690328-112887168	1	+	112690416	112878294	789624	30	127,123,90,81,108,129,104,51,65,82,151,198,174,164,72,74,104,182,252,175,103,146,60,128,136,66,104,166,87,5293,	0,94806,114628,115884,120290,125754,128975,129571,133016,134015,135101,136365,141046,142531,144260,145849,151947,160708,163950,165582,167489,167816,169064,169958,172111,181406,183244,185447,187888,191547,
#Partially deleted in new
chr13	112690328	112887168	chr13:112690328-112887168	3	+	112690416	112878294	789624	30	127,123,90,81,108,129,104,51,65,82,151,198,174,164,72,74,104,182,252,175,103,146,60,128,136,66,104,166,87,5356,	0,94806,114628,115884,120290,125754,128975,129571,133016,134015,135101,136365,141046,142531,144260,145849,151947,160708,163950,165582,167489,167816,169064,169958,172111,181406,183244,185447,187888,191484,
#Partially deleted in new
chr13	112696830	112717675	chr13:112696830-112717675	0	+	112696830	112696830	8553170	2	81,354,	0,20491,
#Partially deleted in new
chr13	112703286	112810699	chr13:112703286-112810699	0	+	112703286	112703286	8553170	5	56,123,90,81,81,	0,81848,101670,102926,107332,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	112745448	112754693	chr13:112745448-112754693	3	-	112745448	112745448	789624	2	1992,200,	0,9045,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr13	112785144	112860798	chr13:112785144-112860798	0	+	112785144	112785144	8553170	21	113,90,81,108,129,104,51,65,82,151,198,174,164,72,74,104,182,252,175,1635,512,	0,19812,21068,25474,30938,34159,34755,38200,39199,40285,41549,46230,47715,49444,51033,57131,65892,69134,70766,72673,75142,
#Partially deleted in new
chr13	112785171	112860798	chr13:112785171-112860798	0	+	112785171	112860442	789624	23	86,90,81,108,129,104,51,65,82,151,198,174,164,72,74,104,182,252,175,103,146,60,512,	0,19785,21041,25447,30911,34132,34728,38173,39172,40258,41522,46203,47688,49417,51006,57104,65865,69107,70739,72646,72973,74221,75115,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	112811565	112812158	chr13:112811565-112812158	3	+	112811565	112811565	8553170	1	593,	0,
#Partially deleted in new
chr13	112836242	112855928	chr13:112836242-112855928	0	+	112836242	112836242	8553170	4	9,104,252,18,	0,6033,18036,19668,
#Partially deleted in new
chr13	112842308	112886113	chr13:112842308-112886113	0	+	112842308	112862508	789624	13	71,182,252,175,103,146,60,136,66,104,166,87,4238,	0,8728,11970,13602,15509,15836,17084,20131,29426,31264,33467,35908,39567,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	112851179	112851854	chr13:112851179-112851854	0	+	112851179	112851179	8553170	2	39,314,	0,361,
#Deleted in new
chr13	112855920	112856805	chr13:112855920-112856805	0	+	112855920	112856109	789624	1	885,	0,
#Partially deleted in new
chr13	112871767	112883958	chr13:112871767-112883958	0	+	112871767	112882064	789624	4	33,104,166,2143,	0,1805,4008,10048,
#Deleted in new
chr13	112873431	112876094	chr13:112873431-112876094	0	+	112873431	112873431	8553170	2	245,319,	0,2344,
#Deleted in new
chr13	112873502	112878459	chr13:112873502-112878459	0	+	112873502	112873502	8553170	3	174,166,243,	0,2273,4714,
#Deleted in new
chr13	112875808	112882188	chr13:112875808-112882188	0	+	112875808	112880638	789624	3	133,104,313,	0,4737,6067,
#Deleted in new
chr13	112880300	112882147	chr13:112880300-112882147	0	+	112880300	112880300	8553170	2	349,272,	0,1575,
#Deleted in new
chr13	112880971	112884513	chr13:112880971-112884513	0	+	112880971	112880971	8553170	1	3542,	0,
#Partially deleted in new
chr13	112894377	113096861	chr13:112894377-113096861	1	+	112902202	113096685	789624	30	54,173,84,115,91,120,117,150,125,115,120,192,192,160,74,74,67,116,70,93,93,126,222,93,79,67,119,122,113,312,	0,7821,120385,130266,150893,166215,169926,170558,171668,175681,180066,180620,181588,182674,183985,184288,186835,188049,189620,190514,190708,191746,192857,193329,193949,194184,195232,200136,201993,202172,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	112902194	112910619	chr13:112902194-112910619	1	+	112902202	112909278	789624	2	177,1367,	0,7058,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	112902194	112958164	chr13:112902194-112958164	0	+	112902202	112917145	789624	3	177,411,2122,	0,14919,53848,
#Deleted in new
chr13	112964834	112966131	chr13:112964834-112966131	3	-	112964834	112964834	8553170	1	1297,	0,
#Deleted in new
chr13	112967483	112968824	chr13:112967483-112968824	3	-	112967483	112967483	8553170	2	506,206,	0,1135,
#Partially deleted in new
chr13	112968499	113099739	chr13:112968499-113099739	1	+	112968536	113096487	789624	28	215,84,115,91,120,117,150,125,115,120,192,192,160,74,74,67,116,70,93,93,126,222,93,79,67,119,122,3369,	0,46263,56144,76771,92093,95804,96436,97546,101559,105944,106498,107466,108552,109863,110166,112713,113927,115498,116392,116586,117624,118735,119207,119827,120062,121110,126014,127871,
#Partially deleted in new
chr13	112969220	113097074	chr13:112969220-113097074	1	+	112969379	113096859	789624	30	238,84,115,91,120,117,150,125,115,120,192,192,160,74,74,67,116,70,93,93,126,222,93,79,67,119,122,113,104,301,	0,45542,55423,76050,91372,95083,95715,96825,100838,105223,105777,106745,107831,109142,109445,111992,113206,114777,115671,115865,116903,118014,118486,119106,119341,120389,125293,127150,127329,127553,
#Partially deleted in new
chr13	112979311	113096487	chr13:112979311-113096487	1	+	112979667	113096487	789624	28	447,84,115,91,120,117,150,125,115,120,192,192,160,74,74,67,116,70,93,93,126,222,93,79,67,119,122,117,	0,35451,45332,65959,81281,84992,85624,86734,90747,95132,95686,96654,97740,99051,99354,101901,103115,104686,105580,105774,106812,107923,108395,109015,109250,110298,115202,117059,
#Partially deleted in new
chr13	112985117	113024754	chr13:112985117-113024754	0	+	112985382	113024754	789624	3	362,84,111,	0,29645,39526,
#Partially deleted in new
chr13	113001269	113064311	chr13:113001269-113064311	0	+	113014770	113064311	789624	6	156,84,115,91,120,8,	0,13493,23374,44001,59323,63034,
#Partially deleted in new
chr13	113001713	113099735	chr13:113001713-113099735	3	+	113001910	113096859	789624	30	270,84,115,91,120,117,150,125,115,120,192,192,160,74,74,67,116,70,93,93,126,222,93,79,67,119,122,113,104,2962,	0,13049,22930,43557,58879,62590,63222,64332,68345,72730,73284,74252,75338,76649,76952,79499,80713,82284,83178,83372,84410,85521,85993,86613,86848,87896,92800,94657,94836,95060,
#Partially deleted in new
chr13	113001753	113090183	chr13:113001753-113090183	1	+	113001910	113089882	789624	27	230,84,115,91,120,117,150,125,115,120,192,192,160,74,74,67,116,70,93,93,126,222,93,79,67,119,309,	0,13009,22890,43517,58839,62550,63182,64292,68305,72690,73244,74212,75298,76609,76912,79459,80673,82244,83138,83332,84370,85481,85953,86573,86808,87856,88121,
#Partially deleted in new
chr13	113001784	113024908	chr13:113001784-113024908	0	+	113001784	113001784	8553170	3	199,84,265,	0,12978,22859,
#Partially deleted in new
chr13	113001892	113027068	chr13:113001892-113027068	1	+	113001910	113027007	789624	4	91,84,115,200,	0,12870,22751,24976,
#Deleted in new
chr13	113008777	113009424	chr13:113008777-113009424	3	+	113008777	113008777	8553170	1	647,	0,
#Deleted in new
chr13	113009670	113010319	chr13:113009670-113010319	3	+	113009670	113009670	8553170	1	649,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	113024663	113034137	chr13:113024663-113034137	0	+	113024663	113034058	789624	2	95,266,	0,9208,
#Partially deleted in new
chr13	113024697	113052753	chr13:113024697-113052753	0	+	113024697	113052563	789624	3	61,91,247,	0,20573,27809,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	113040347	113047341	chr13:113040347-113047341	0	+	113040347	113040347	8553170	2	661,5066,	0,1928,
#Deleted in new
chr13	113044461	113045322	chr13:113044461-113045322	0	+	113044461	113044461	8553170	2	564,52,	0,809,
#Deleted in new
chr13	113044661	113046855	chr13:113044661-113046855	1	+	113044724	113046603	789624	3	227,91,258,	0,609,1936,
#Partially deleted in new
chr13	113044687	113054905	chr13:113044687-113054905	0	+	113044687	113044687	8553170	3	201,91,604,	0,583,9614,
#Partially deleted in new
chr13	113044850	113065303	chr13:113044850-113065303	0	+	113044850	113065211	789624	5	38,91,120,117,368,	0,420,15742,19453,20085,
#Partially deleted in new
chr13	113064311	113070394	chr13:113064311-113070394	0	+	113064311	113064311	8553170	4	109,150,125,336,	0,624,1734,5747,
#Partially deleted in new
chr13	113064689	113075026	chr13:113064689-113075026	0	+	113064689	113064689	8553170	6	65,150,125,115,120,29,	0,246,1356,5369,9754,10308,
#Partially deleted in new
chr13	113074466	113098208	chr13:113074466-113098208	0	+	113074466	113096685	789624	21	97,192,192,160,74,74,67,116,70,93,93,126,222,93,79,67,119,75,122,113,1659,	0,531,1499,2585,3896,4199,6746,7960,9531,10425,10619,11657,12768,13240,13860,14095,15143,16654,20047,21904,22083,
#Deleted in new
chr13	113084566	113086165	chr13:113084566-113086165	0	+	113084566	113084566	8553170	3	418,93,42,	0,519,1557,
#Deleted in new
chr13	113086187	113096399	chr13:113086187-113096399	0	+	113086187	113096399	789624	10	62,222,93,79,67,119,84,75,122,29,	0,1047,1519,2139,2374,3422,3880,4933,8326,10183,
#Deleted in new
chr13	113087349	113098388	chr13:113087349-113098388	0	+	113087349	113096859	789624	9	107,93,79,67,119,122,113,104,1615,	0,357,977,1212,2260,7164,9021,9200,9424,
#Deleted in new
chr13	113087398	113097669	chr13:113087398-113097669	0	+	113087398	113096859	789624	11	58,93,79,67,119,93,75,122,113,104,896,	0,308,928,1163,2211,2669,3722,7115,8972,9151,9375,
#Deleted in new
chr13	113087795	113094604	chr13:113087795-113094604	0	+	113087795	113094604	789624	6	4,79,67,119,93,91,	0,531,766,1814,2272,6718,
#Deleted in new
chr13	113089635	113096832	chr13:113089635-113096832	0	+	113089635	113096832	789624	6	93,75,122,113,104,59,	0,1485,4878,6735,6914,7138,
#Deleted in new
chr13	113089690	113095178	chr13:113089690-113095178	0	+	113089690	113095070	789624	3	38,122,210,	0,4823,5278,
#Deleted in new
chr13	113090968	113094859	chr13:113090968-113094859	0	+	113090968	113090968	8553170	2	227,346,	0,3545,
#Deleted in new
chr13	113093600	113098548	chr13:113093600-113098548	0	+	113093600	113093600	8553170	4	1035,113,104,1775,	0,2770,2949,3173,
#Deleted in new
chr13	113095221	113098546	chr13:113095221-113098546	0	+	113095221	113095221	8553170	2	1432,1773,	0,1552,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	113105787	113120678	chr13:113105787-113120678	1	+	113105841	113119008	789624	6	118,114,141,110,124,2266,	0,8059,9872,10978,11685,12625,
#Partially deleted in new
chr13	113105790	113120031	chr13:113105790-113120031	1	+	113105841	113119008	0	8	115,161,25,114,141,110,124,1619,	0,4899,7961,8056,9869,10975,11682,12622,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr13	113105806	113120681	chr13:113105806-113120681	3	+	113105841	113119008	0	9	99,66,161,25,114,141,110,124,2269,	0,1038,4883,7945,8040,9853,10959,11666,12606,
#Partially deleted in new
chr13	113105838	113116788	chr13:113105838-113116788	0	+	113105841	113113788	789624	5	67,147,186,141,23,	0,4865,7936,9821,10927,
#Partially deleted in new
chr13	113110339	113116835	chr13:113110339-113116835	0	+	113110339	113110339	8553170	3	511,186,70,	0,3435,6426,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	113110678	113114903	chr13:113110678-113114903	0	+	113110678	113110678	8553170	5	172,25,114,221,26,	0,3073,3168,3885,4199,
#Partially deleted in new
chr13	113122813	113149527	chr13:113122813-113149527	1	+	113122855	113149059	789624	8	112,161,25,114,132,245,108,612,	0,6638,15643,16543,18105,21037,24565,26102,
#Partially deleted in new
chr13	113122813	113149462	chr13:113122813-113149462	1	+	113122855	113149059	789624	8	112,161,25,114,132,245,114,547,	0,6638,15643,16543,18105,21037,24565,26102,
#Partially deleted in new
chr13	113122817	113149529	chr13:113122817-113149529	3	+	113122855	113149517	0	8	108,161,25,114,132,245,118,614,	0,6634,15639,16539,18101,21033,24561,26098,
#Partially deleted in new
chr13	113122818	113144218	chr13:113122818-113144218	0	+	113122818	113122818	8553170	6	107,161,25,114,132,368,	0,6633,15638,16538,18100,21032,
#Partially deleted in new
chr13	113122835	113130306	chr13:113122835-113130306	0	+	113122835	113122835	8553170	3	90,161,313,	0,6616,7158,
#Partially deleted in new
chr13	113122837	113147472	chr13:113122837-113147472	0	+	113122855	113140589	789624	7	88,161,25,114,484,245,94,	0,6614,15619,16519,17729,21013,24541,
#Deleted in new
chr13	113130415	113132054	chr13:113130415-113132054	7	+	113130415	113130415	16724991	1	1639,	0,
#Partially deleted in new
chr13	113140519	113147451	chr13:113140519-113147451	0	+	113140519	113140519	8553170	3	531,245,73,	0,3331,6859,
#Partially deleted in new
chr13	113149431	113154002	chr13:113149431-113154002	3	-	113149431	113149431	8553170	2	1379,859,	0,3712,
#Partially deleted in new
chr13	113158653	113172380	chr13:113158653-113172380	1	+	113158660	113172105	0	9	77,66,164,25,114,132,68,118,787,	0,545,1360,2294,4355,5859,6399,11759,12940,
#Partially deleted in new
chr13	113158653	113172383	chr13:113158653-113172383	3	+	113158660	113172105	0	8	77,164,25,114,132,68,118,790,	0,1360,2294,4355,5859,6399,11759,12940,
#Partially deleted in new
chr13	113164518	113170514	chr13:113164518-113170514	0	+	113164518	113164518	8553170	5	126,68,30,82,102,	0,534,1579,1826,5894,
#Deleted in new
chr13	113165001	113165183	chr13:113165001-113165183	3	-	113165001	113165001	8553170	1	182,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr13	113177538	113208715	chr13:113177538-113208715	1	-	113178197	113208634	0	15	470,114,124,126,74,101,142,76,104,55,45,225,74,90,117,	0,635,1427,2378,2619,3591,6807,7946,13333,17532,18642,19480,20652,22888,31060,
#Partially deleted in new
chr13	113177576	113208711	chr13:113177576-113208711	3	-	113178197	113208634	0	14	711,124,126,74,101,142,76,104,55,42,66,74,90,113,	0,1389,2340,2581,3553,6769,7908,13295,17494,18604,19601,20614,22850,31022,
#Partially deleted in new
chr13	113177610	113208666	chr13:113177610-113208666	1	-	113178197	113208634	0	15	398,114,124,126,74,101,142,76,104,55,42,66,74,90,68,	0,563,1355,2306,2547,3519,6735,7874,13261,17460,18570,19567,20580,22816,30988,
#Partially deleted in new
chr13	113177610	113208715	chr13:113177610-113208715	1	-	113178197	113208634	0	15	366,114,124,126,74,101,142,76,104,55,42,66,74,90,117,	0,563,1355,2306,2547,3519,6735,7874,13261,17460,18570,19567,20580,22816,30988,
#Partially deleted in new
chr13	113177611	113208669	chr13:113177611-113208669	1	-	113178197	113208634	0	15	365,114,124,126,74,101,142,76,104,55,45,225,74,90,71,	0,562,1354,2305,2546,3518,6734,7873,13260,17459,18569,19407,20579,22815,30987,
#Partially deleted in new
chr13	113177611	113208106	chr13:113177611-113208106	1	-	113178197	113208053	0	15	397,114,124,126,74,101,142,76,104,55,42,66,74,90,83,	0,562,1354,2305,2546,3518,6734,7873,13260,17459,18569,19566,20579,22815,30412,
#Deleted in new
chr13	113177611	113178375	chr13:113177611-113178375	0	-	113177611	113177611	8553170	2	397,202,	0,562,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	113177611	113188608	chr13:113177611-113188608	0	-	113177611	113177611	8553170	8	397,114,124,126,74,101,142,3124,	0,562,1354,2305,2546,3518,6734,7873,
#Deleted in new
chr13	113177612	113178478	chr13:113177612-113178478	0	-	113177612	113177612	8553170	2	364,305,	0,561,
#Partially deleted in new
chr13	113177616	113208650	chr13:113177616-113208650	1	-	113178197	113208053	0	14	671,124,126,74,101,142,76,104,55,42,66,74,90,627,	0,1349,2300,2541,3513,6729,7868,13255,17454,18564,19561,20574,22810,30407,
#Partially deleted in new
chr13	113178271	113187399	chr13:113178271-113187399	0	-	113178271	113178271	8553170	8	16,124,126,74,101,142,76,200,	0,694,1645,1886,2858,6074,7213,8928,
#Partially deleted in new
chr13	113180160	113208629	chr13:113180160-113208629	0	-	113180160	113180160	8553170	10	71,101,142,104,55,42,66,74,90,31,	0,969,4185,10711,14910,16020,17017,18030,20266,28438,
#Partially deleted in new
chr13	113180219	113208641	chr13:113180219-113208641	0	-	113180219	113180219	8553170	10	12,101,142,76,55,42,66,74,90,43,	0,910,4126,5265,14851,15961,16958,17971,20207,28379,
#Partially deleted in new
chr13	113181128	113208650	chr13:113181128-113208650	0	-	113181128	113181128	8553170	10	102,142,76,104,55,42,66,71,90,52,	0,3217,4356,9743,13942,15052,16049,17062,19298,27470,
#Partially deleted in new
chr13	113190702	113208652	chr13:113190702-113208652	0	-	113190702	113190702	8553170	7	273,55,42,66,74,90,54,	0,4368,5478,6475,7488,9724,17896,
#Partially deleted in new
chr13	113196196	113200673	chr13:113196196-113200673	0	-	113196196	113196196	8553170	4	26,66,74,247,	0,981,1994,4230,
#Partially deleted in new
chr13	113208192	113265072	chr13:113208192-113265072	1	+	113218980	113263582	0	20	415,116,104,70,74,163,90,83,68,119,193,105,111,86,108,114,106,173,153,1586,	0,1780,10752,19783,21253,24984,25704,26870,28630,31240,34775,36217,36756,36959,37763,44889,46500,46760,52414,55294,
#Partially deleted in new
chr13	113208693	113265072	chr13:113208693-113265072	1	+	113218980	113263582	789624	20	59,116,104,70,74,187,90,83,68,119,193,105,111,86,108,114,106,173,153,1586,	0,1279,10251,19282,20752,24459,25203,26369,28129,30739,34274,35716,36255,36458,37262,44388,45999,46259,51913,54793,
#Partially deleted in new
chr13	113208771	113265077	chr13:113208771-113265077	1	+	113218980	113263582	0	20	97,116,104,70,74,163,90,83,68,119,193,105,111,86,108,114,106,173,153,1591,	0,1201,10173,19204,20674,24405,25125,26291,28051,30661,34196,35638,36177,36380,37184,44310,45921,46181,51835,54715,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr13	113208835	113267108	chr13:113208835-113267108	1	+	113218980	113263582	0	20	33,91,104,70,74,163,90,83,68,119,193,105,111,86,108,114,106,173,153,3622,	0,1137,10109,19140,20610,24341,25061,26227,27987,30597,34132,35574,36113,36316,37120,44246,45857,46117,51771,54651,
#Partially deleted in new
chr13	113209543	113263582	chr13:113209543-113263582	3	+	113209627	113263582	0	20	232,116,104,70,74,163,90,83,68,119,193,105,111,86,108,114,106,173,153,96,	0,429,9401,18432,19902,23633,24353,25519,27279,29889,33424,34866,35405,35608,36412,43538,45149,45409,51063,53943,
#Partially deleted in new
chr13	113209599	113230212	chr13:113209599-113230212	1	+	113209627	113229654	789624	6	176,116,104,70,74,571,	0,373,9345,18376,19846,20042,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	113209615	113219812	chr13:113209615-113219812	0	+	113209615	113209615	8553170	4	160,116,104,486,	0,357,9329,9711,
#Partially deleted in new
chr13	113209629	113228017	chr13:113209629-113228017	0	+	113209629	113209629	8553170	3	146,104,42,	0,9315,18346,
#Partially deleted in new
chr13	113209832	113230030	chr13:113209832-113230030	0	+	113209832	113209832	8553170	5	256,104,70,74,389,	0,9112,18143,19613,19809,
#Partially deleted in new
chr13	113209882	113235145	chr13:113209882-113235145	0	+	113209882	113209882	8553170	7	206,104,70,74,163,90,83,	0,9062,18093,19563,23294,24014,25180,
#Partially deleted in new
chr13	113244222	113254775	chr13:113244222-113254775	0	+	113244222	113244222	8553170	6	292,111,86,108,114,83,	0,726,929,1733,8859,10470,
#Partially deleted in new
chr13	113245955	113263559	chr13:113245955-113263559	0	+	113245955	113245955	8553170	5	108,114,106,173,73,	0,7126,8737,8997,17531,
#Deleted in new
chr13	113262919	113262999	chr13:113262919-113262999	3	+	113262919	113262919	5263520	1	80,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	113276615	113277734	chr13:113276615-113277734	7	+	113276615	113276615	16724991	1	1119,	0,
#Partially deleted in new
chr13	113297240	113323672	chr13:113297240-113323672	3	+	113297434	113322421	789624	9	255,122,220,159,188,126,67,171,1391,	0,9244,12402,13468,22228,23104,24163,24316,25041,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr13	113304931	113323430	chr13:113304931-113323430	0	+	113304931	113304931	8553170	6	1675,220,159,188,1126,1874,	0,4711,5777,14537,15413,16625,
#Deleted in new
chr13	113321766	113322594	chr13:113321766-113322594	0	+	113321766	113321766	8553170	2	111,313,	0,515,
#Partially deleted in new
chr13	113324163	113364148	chr13:113324163-113364148	1	-	113324428	113364051	789624	6	414,97,125,159,149,129,	0,20699,26685,31159,39598,39856,
#Partially deleted in new
chr13	113324189	113364126	chr13:113324189-113364126	3	-	113324487	113364051	789624	8	388,186,173,97,125,159,149,107,	0,1471,1729,20673,26659,31133,39572,39830,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	113324844	113364148	chr13:113324844-113364148	1	-	113325546	113364051	789624	7	1002,173,97,125,159,149,129,	0,1074,20018,26004,30478,38917,39175,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	113325061	113355436	chr13:113325061-113355436	1	-	113325546	113355428	789624	5	785,173,97,125,114,	0,857,19801,25787,30261,
#Deleted in new
chr13	113339449	113339958	chr13:113339449-113339958	3	-	113339449	113339449	8553170	1	509,	0,
#Partially deleted in new
chr13	113351672	113355734	chr13:113351672-113355734	1	+	113351672	113351672	8553170	2	298,569,	0,3493,
#Partially deleted in new
chr13	113351815	113361868	chr13:113351815-113361868	3	+	113351815	113351815	789624	2	155,310,	0,9743,
#Partially deleted in new
chr13	113359616	113364131	chr13:113359616-113364131	0	-	113359616	113359616	8553170	3	668,149,60,	0,4145,4455,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	113399609	113453524	chr13:113399609-113453524	1	-	113403377	113453437	789624	8	8611,154,133,128,141,126,165,301,	0,23216,24607,25442,29342,34132,44815,53614,
#Partially deleted in new
chr13	113421939	113449142	chr13:113421939-113449142	1	-	113422821	113444557	789624	7	1040,133,128,141,126,165,144,	0,2277,3112,7012,11802,22485,27059,
#Partially deleted in new
chr13	113422632	113453524	chr13:113422632-113453524	3	-	113422821	113453437	789624	7	347,133,128,141,126,165,301,	0,1584,2419,6319,11109,21792,30591,
#Partially deleted in new
chr13	113425051	113449277	chr13:113425051-113449277	0	-	113425051	113444557	789624	5	128,141,126,165,279,	0,3900,8690,19373,23947,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr13	113455818	113490691	chr13:113455818-113490691	1	-	113458028	113474244	789624	5	2290,97,83,131,25,	0,3493,5235,18305,34848,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	113455818	113490691	chr13:113455818-113490691	0	-	113462850	113490669	0	8	2290,97,83,152,131,169,217,25,	0,3493,5235,6921,18305,24756,28021,34848,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr13	113457046	113490952	chr13:113457046-113490952	3	-	113458028	113490669	0	7	1062,97,83,131,169,217,286,	0,2265,4007,17077,23528,26793,33620,
#Deleted in new
chr13	113457796	113459543	chr13:113457796-113459543	0	-	113457796	113457796	8553170	2	312,232,	0,1515,
#Partially deleted in new
chr13	113459311	113490608	chr13:113459311-113490608	0	-	113462850	113490608	789624	7	97,83,152,131,169,217,176,	0,1742,3428,14812,21263,24528,31121,
#Partially deleted in new
chr13	113461054	113463088	chr13:113461054-113463088	0	-	113461054	113461054	8553170	2	82,349,	0,1685,
#Partially deleted in new
chr13	113468900	113476135	chr13:113468900-113476135	3	+	113468900	113468900	8553170	2	54,276,	0,6959,
#Partially deleted in new
chr13	113474196	113484190	chr13:113474196-113484190	0	-	113474196	113484014	789624	3	58,169,351,	0,6378,9643,
#Partially deleted in new
chr13	113474209	113490951	chr13:113474209-113490951	0	-	113474209	113490811	789624	3	45,169,285,	0,6365,16457,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	113475389	113476135	chr13:113475389-113476135	0	+	113475389	113475389	8553170	2	43,276,	0,470,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	113478914	113479078	chr13:113478914-113479078	3	-	113478914	113478914	8553170	1	164,	0,
#Partially deleted in new
chr13	113480465	113483996	chr13:113480465-113483996	0	-	113480465	113480465	8553170	2	278,157,	0,3374,
#Partially deleted in new
chr13	113480647	113490691	chr13:113480647-113490691	0	-	113480647	113484014	789624	4	96,357,84,25,	0,3192,8442,10019,
#Partially deleted in new
chr13	113483962	113490494	chr13:113483962-113490494	0	-	113483962	113484014	789624	3	234,164,62,	0,5127,6470,
#Partially deleted in new
chr13	113490994	113550195	chr13:113490994-113550195	3	+	113495581	113549538	789624	13	279,524,180,192,129,93,187,118,196,151,80,150,771,	0,4507,7347,8963,10757,12501,19243,29621,43050,48362,56305,57308,58430,
#Partially deleted in new
chr13	113491042	113550229	chr13:113491042-113550229	1	+	113495581	113549653	789624	8	231,524,180,192,129,93,187,596,	0,4459,7299,8915,10709,12453,19195,58591,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr13	113491095	113535286	chr13:113491095-113535286	1	+	113495581	113534276	789624	9	178,524,180,192,129,93,187,118,1242,	0,4406,7246,8862,10656,12400,19142,29520,42949,
#Deleted in new
chr13	113495870	113498645	chr13:113495870-113498645	0	+	113495870	113498623	789624	2	155,304,	0,2471,
#Partially deleted in new
chr13	113500020	113520661	chr13:113500020-113520661	0	+	113500020	113520661	789624	4	129,129,187,46,	0,1731,10217,20595,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	113500023	113506062	chr13:113500023-113506062	0	+	113500023	113503621	789624	3	126,129,2567,	0,1728,3472,
#Deleted in new
chr13	113511746	113514473	chr13:113511746-113514473	3	+	113511746	113511746	8553170	2	241,177,	0,2550,
#Partially deleted in new
chr13	113520545	113539482	chr13:113520545-113539482	0	+	113520545	113520545	8553170	2	188,126,	0,18811,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	113527259	113530621	chr13:113527259-113530621	3	+	113527259	113527259	8553170	1	3362,	0,
#Deleted in new
chr13	113545754	113549915	chr13:113545754-113549915	0	+	113545754	113545754	8553170	4	143,80,150,491,	0,1545,2548,3670,
#Deleted in new
chr13	113547148	113549638	chr13:113547148-113549638	0	+	113547148	113547148	8553170	3	231,150,214,	0,1154,2276,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	113548302	113554590	chr13:113548302-113554590	0	+	113548302	113550812	789624	4	150,77,61,3254,	0,1122,2452,3034,
#Partially deleted in new
chr13	113548332	113552214	chr13:113548332-113552214	0	+	113548332	113550812	789624	5	120,77,61,134,183,	0,1092,2422,3096,3699,
#Partially deleted in new
chr13	113584720	113633285	chr13:113584720-113633285	0	+	113584720	113584720	8553170	7	168,98,76,67,107,122,166,	0,859,1053,26275,38459,46902,48399,
#Deleted in new
chr13	113584732	113586180	chr13:113584732-113586180	0	+	113584732	113584732	8553170	3	156,76,215,	0,1041,1233,
#Partially deleted in new
chr13	113584740	113641470	chr13:113584740-113641470	3	+	113585837	113640267	0	12	148,76,67,107,122,166,144,69,152,167,79,1351,	0,1033,26255,38439,46882,48379,49149,49793,51236,51793,53077,55379,
#Partially deleted in new
chr13	113584742	113633999	chr13:113584742-113633999	0	+	113584742	113584742	8553170	7	146,76,67,107,283,166,110,	0,1031,26253,38437,46880,48377,49147,
#Partially deleted in new
chr13	113585272	113640310	chr13:113585272-113640310	0	+	113585837	113633897	789624	11	155,76,67,107,166,144,69,152,167,277,191,	0,501,25723,37907,47847,48617,49261,50704,51261,52347,54847,
#Partially deleted in new
chr13	113585332	113635996	chr13:113585332-113635996	0	+	113585837	113635996	789624	9	95,76,67,107,122,166,144,69,20,	0,441,25663,37847,46290,47787,48557,49201,50644,
#Partially deleted in new
chr13	113585425	113633287	chr13:113585425-113633287	0	+	113585837	113633287	789624	6	252,76,67,107,122,168,	0,348,25570,37754,46197,47694,
#Deleted in new
chr13	113637150	113640684	chr13:113637150-113640684	0	+	113637150	113637150	8553170	3	92,79,565,	0,667,2969,
#Partially deleted in new
chr13	113648803	113658186	chr13:113648803-113658186	3	-	113649373	113658144	789624	7	732,102,57,200,114,129,154,	0,1602,2867,4069,4517,6010,9229,
#Partially deleted in new
chr13	113667154	113737735	chr13:113667154-113737735	3	+	113667386	113735363	0	7	931,128,158,84,125,202,2668,	0,2532,4344,55919,64064,65729,67913,
#Partially deleted in new
chr13	113726485	113735236	chr13:113726485-113735236	0	+	113726485	113726485	8553170	4	52,125,202,169,	0,4733,6398,8582,
#Deleted in new
chr13	113734474	113737735	chr13:113734474-113737735	0	+	113734474	113734474	8553170	1	3261,	0,
#Deleted in new
chr13	113748510	113751089	chr13:113748510-113751089	3	-	113748510	113748510	789624	1	2579,	0,
#Partially deleted in new
chr13	113759239	113799660	chr13:113759239-113799660	1	+	113759269	113799497	789624	5	76,143,63,90,322,	0,6875,9858,35908,40099,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr13	113759242	113816995	chr13:113759242-113816995	3	+	113759269	113811903	789624	9	73,143,63,90,81,86,160,144,5260,	0,6872,9855,35905,40096,41584,42410,45642,52493,
#Deleted in new
chr13	113766163	113769815	chr13:113766163-113769815	0	+	113766163	113766163	8553170	3	94,63,223,	0,2934,3429,
#Partially deleted in new
chr13	113768135	113799857	chr13:113768135-113799857	0	+	113768135	113768135	8553170	6	130,83,63,90,81,40,	0,751,962,27012,31203,31682,
#Deleted in new
chr13	113799887	113804890	chr13:113799887-113804890	0	+	113799887	113799887	8553170	4	184,39,160,6,	0,939,1765,4997,
#Deleted in new
chr13	113803049	113811953	chr13:113803049-113811953	0	+	113803049	113803049	8553170	3	283,144,218,	0,1835,8686,
#Partially deleted in new
chr13	113820548	113833741	chr13:113820548-113833741	0	-	113820548	113820548	8553170	7	470,229,176,169,165,190,1108,	0,1409,2826,6447,7998,11750,12085,
#Deleted in new
chr13	113820548	113823194	chr13:113820548-113823194	0	-	113820548	113820548	8553170	1	2646,	0,
#Partially deleted in new
chr13	113820551	113836044	chr13:113820551-113836044	0	-	113820551	113820551	8553170	9	467,229,176,169,165,190,119,122,532,	0,1406,2823,6444,7995,11747,12082,13999,14961,
#Partially deleted in new
chr13	113820557	113864067	chr13:113820557-113864067	3	-	113820863	113863920	789624	15	461,229,176,169,165,190,119,122,123,123,123,63,25,167,235,	0,1400,2817,6438,7989,11741,12076,13993,14955,17511,19170,25969,27468,43017,43275,
#Deleted in new
chr13	113842489	113844306	chr13:113842489-113844306	0	+	113842489	113842489	8553170	1	1817,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr13	113847676	113864015	chr13:113847676-113864015	0	-	113847676	113847676	8553170	4	162,25,167,183,	0,349,15898,16156,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	113864167	113866833	chr13:113864167-113866833	3	+	113864167	113864167	789624	2	128,1824,	0,842,
#Partially deleted in new
chr13	113877607	113879376	chr13:113877607-113879376	0	+	113877607	113877607	8553170	2	82,262,	0,1507,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	113878412	113879367	chr13:113878412-113879367	3	+	113878412	113878412	8553170	2	380,253,	0,702,
#Partially deleted in new
chr13	113878488	113883555	chr13:113878488-113883555	3	-	113878488	113878488	8553170	4	844,197,145,141,	0,2210,2859,4926,
#Partially deleted in new
chr13	113878699	113883445	chr13:113878699-113883445	0	-	113878699	113878699	8553170	3	633,145,31,	0,2648,4715,
#Partially deleted in new
chr13	113878699	113883651	chr13:113878699-113883651	1	-	113878699	113878699	8553170	3	633,145,63,	0,2648,4889,
#Partially deleted in new
chr13	113879003	113881930	chr13:113879003-113881930	0	-	113879003	113879003	8553170	3	329,145,336,	0,2344,2591,
#Partially deleted in new
chr13	113879003	113883328	chr13:113879003-113883328	0	-	113879003	113879003	8553170	3	329,145,98,	0,2344,4227,
#Partially deleted in new
chr13	113879010	113882202	chr13:113879010-113882202	0	-	113879010	113879010	8553170	3	322,145,243,	0,2337,2949,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	113880531	113881486	chr13:113880531-113881486	1	-	113880531	113880531	8553170	2	364,139,	0,816,
#Deleted in new
chr13	113883666	113885335	chr13:113883666-113885335	3	+	113883666	113883666	8553170	2	143,382,	0,1287,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	113888305	113923512	chr13:113888305-113923512	3	+	113888305	113888305	8553170	8	126,153,108,224,220,198,130,1737,	0,10220,10459,13485,31129,32417,32744,33470,
#Partially deleted in new
chr13	113895102	113921317	chr13:113895102-113921317	0	+	113895102	113895102	8553170	8	147,162,224,308,80,220,198,268,	0,3423,6688,20693,21762,24332,25620,25947,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	113926513	113928844	chr13:113926513-113928844	3	-	113926513	113926513	789624	1	2331,	0,
#Partially deleted in new
chr13	113953704	113974079	chr13:113953704-113974079	3	-	113956772	113973997	789624	7	3135,68,48,48,166,52,272,	0,11222,13636,14762,14890,16466,20103,
#Partially deleted in new
chr13	113956548	113970409	chr13:113956548-113970409	0	-	113956548	113956548	8553170	4	291,68,52,47,	0,8378,13622,13814,
#Partially deleted in new
chr13	113977782	114132611	chr13:113977782-114132611	3	-	113979346	114132489	789624	24	1640,184,104,209,83,107,74,78,78,107,124,75,115,149,157,105,77,73,81,77,95,104,118,177,	0,3892,14702,18748,21802,23043,29750,31604,33388,35359,37426,38414,39454,40321,40980,43621,46496,49606,50064,52028,63217,74269,95937,154652,
#Partially deleted in new
chr13	114021408	114036193	chr13:114021408-114036193	0	-	114021408	114021408	8553170	6	100,77,68,85,77,568,	0,2870,5980,6434,8402,14217,
#Deleted in new
chr13	114107568	114108820	chr13:114107568-114108820	3	-	114107568	114107568	8553170	2	200,180,	0,1072,
#Partially deleted in new
chr13	114154690	114179420	chr13:114154690-114179420	0	+	114179330	114179420	789624	5	94,72,311,502,358,	0,21669,22887,23701,24372,
#Partially deleted in new
chr13	114175484	114215835	chr13:114175484-114215835	3	-	114175484	114175484	8553170	4	161,65,169,180,	0,36706,38635,40171,
#Partially deleted in new
chr13	114179237	114222770	chr13:114179237-114222770	0	+	114179237	114179237	8553170	4	130,81,119,270,	0,17158,21087,43263,
#Partially deleted in new
chr13	114179249	114223084	chr13:114179249-114223084	1	+	114179330	114222507	789624	4	171,81,119,587,	0,17146,21075,43248,
#Partially deleted in new
chr13	114179330	114222776	chr13:114179330-114222776	1	+	114179330	114222507	789624	4	90,81,119,276,	0,17065,20994,43170,
#Partially deleted in new
chr13	114179330	114222518	chr13:114179330-114222518	3	+	114179330	114222518	789624	5	90,81,119,190,21,	0,17065,20994,32581,43167,
#Partially deleted in new
chr13	114199703	114222600	chr13:114199703-114222600	0	+	114199703	114199703	8553170	4	39,119,190,103,	0,621,12208,22794,
#Partially deleted in new
chr13	114234886	114272675	chr13:114234886-114272675	3	+	114235084	114272443	0	19	246,55,98,39,141,160,92,134,80,50,74,126,153,64,62,136,91,298,112,	0,1758,1912,4103,4463,7234,8370,8969,10003,11113,12044,15662,22191,24448,27000,27992,30263,37297,37677,
#Partially deleted in new
chr13	114234886	114272675	chr13:114234886-114272675	1	+	114239391	114272443	789624	18	246,55,98,39,141,160,92,134,80,50,74,126,64,62,136,91,298,112,	0,1758,1912,4103,4463,7234,8370,8969,10003,11113,12044,15662,24448,27000,27992,30263,37297,37677,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr13	114234933	114272657	chr13:114234933-114272657	0	+	114235084	114269579	8553170	20	199,55,98,39,141,160,92,134,80,50,74,126,153,64,62,136,91,58,298,94,	0,1711,1865,4056,4416,7187,8323,8922,9956,11066,11997,15615,22144,24401,26953,27945,30216,34629,37250,37630,
#Partially deleted in new
chr13	114234976	114272675	chr13:114234976-114272675	1	+	114235084	114272443	0	18	156,55,98,39,141,160,92,134,80,50,74,126,153,64,62,136,91,492,	0,1668,1822,4013,4373,7144,8280,8879,9913,11023,11954,15572,22101,24358,26910,27902,30173,37207,
#Partially deleted in new
chr13	114234978	114272675	chr13:114234978-114272675	1	+	114239391	114272443	0	19	154,55,95,39,181,160,92,134,80,50,74,126,153,64,62,136,91,298,112,	0,1666,1823,4011,4331,7142,8278,8877,9911,11021,11952,15570,22099,24356,26908,27900,30171,37205,37585,
#Partially deleted in new
chr13	114235017	114242675	chr13:114235017-114242675	0	+	114235017	114235017	8553170	6	115,55,98,39,141,555,	0,1627,1781,3972,4332,7103,
#Partially deleted in new
chr13	114235060	114272675	chr13:114235060-114272675	1	+	114235084	114272443	0	19	72,55,95,39,141,160,92,134,80,50,74,126,153,64,62,136,91,298,112,	0,1584,1741,3929,4289,7060,8196,8795,9829,10939,11870,15488,22017,24274,26826,27818,30089,37123,37503,
#Partially deleted in new
chr13	114235060	114272675	chr13:114235060-114272675	1	+	114239391	114272443	0	19	72,55,95,39,141,160,92,134,80,50,74,126,153,64,62,136,91,298,112,	0,1584,1741,3929,4289,7060,8196,8795,9829,10939,11870,15488,22017,24274,26826,27818,30089,37123,37503,
#Partially deleted in new
chr13	114235080	114272723	chr13:114235080-114272723	1	+	114239391	114272443	789624	17	52,55,95,39,141,160,92,134,80,50,74,126,64,62,136,91,540,	0,1564,1721,3909,4269,7040,8176,8775,9809,10919,11850,15468,24254,26806,27798,30069,37103,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr13	114244561	114262979	chr13:114244561-114262979	0	+	114244561	114244561	8553170	8	408,50,74,126,153,64,62,101,	0,1438,2369,5987,12516,14773,17325,18317,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	114245742	114247237	chr13:114245742-114247237	0	+	114245742	114245742	8553170	2	307,307,	0,1188,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	114264211	114272485	chr13:114264211-114272485	0	+	114264211	114264211	8553170	3	50,348,302,	0,681,7972,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	114273827	114273908	chr13:114273827-114273908	3	+	114273827	114273827	5263520	1	81,	0,
#Partially deleted in new
chr13	114281583	114305817	chr13:114281583-114305817	3	+	114281639	114304917	0	10	263,107,107,99,111,56,159,161,295,1029,	0,437,1253,4718,4935,9905,10050,17256,20147,23205,
#Partially deleted in new
chr13	114281602	114282270	chr13:114281602-114282270	1	+	114281639	114282131	789624	2	244,250,	0,418,
#Partially deleted in new
chr13	114281627	114305808	chr13:114281627-114305808	1	+	114281639	114304917	0	9	219,107,107,111,56,159,161,295,1020,	0,393,1209,4891,9861,10006,17212,20103,23161,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	114281636	114283729	chr13:114281636-114283729	0	+	114281636	114281636	8553170	3	210,107,893,	0,384,1200,
#Partially deleted in new
chr13	114281644	114291757	chr13:114281644-114291757	0	+	114281644	114281644	8553170	6	202,107,99,111,56,124,	0,1192,4657,4874,9844,9989,
#Partially deleted in new
chr13	114281719	114304949	chr13:114281719-114304949	0	+	114281719	114281719	8553170	8	127,107,107,111,56,159,137,161,	0,301,1117,4799,9769,9914,20011,23069,
#Partially deleted in new
chr13	114281924	114301792	chr13:114281924-114301792	0	+	114281924	114281924	8553170	6	203,107,56,159,161,62,	0,912,9564,9709,16915,19806,
#Partially deleted in new
chr13	114281952	114301756	chr13:114281952-114301756	0	+	114281952	114281952	8553170	8	175,107,142,111,56,159,161,26,	0,884,4306,4566,9536,9681,16887,19778,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr13	114285076	114287617	chr13:114285076-114287617	0	+	114285076	114285076	8553170	2	1324,1099,	0,1442,
#Partially deleted in new
chr13	114285974	114291718	chr13:114285974-114291718	0	+	114285974	114285974	8553170	4	426,111,56,85,	0,544,5514,5659,
#Partially deleted in new
chr13	114286373	114291744	chr13:114286373-114291744	0	+	114286373	114286373	8553170	3	256,56,111,	0,5115,5260,
#Partially deleted in new
chr13	114286384	114305808	chr13:114286384-114305808	0	+	114286384	114286384	8553170	6	16,111,188,161,295,1020,	0,134,5220,12455,15346,18404,
#Deleted in new
chr13	114306645	114307066	chr13:114306645-114307066	7	+	114306645	114306645	16724991	1	421,	0,
#Partially deleted in new
chr13	114314334	114327330	chr13:114314334-114327330	3	+	114323842	114326281	0	3	309,123,3543,	0,6775,9453,
#Partially deleted in new
chr13	114314481	114337626	chr13:114314481-114337626	0	+	114314481	114314481	8553170	3	162,123,70,	0,6628,23075,
#Partially deleted in new
chr13	114314487	114324279	chr13:114314487-114324279	0	+	114323842	114324279	789624	3	156,123,489,	0,6622,9303,
#Partially deleted in new
chr13	114314489	114324208	chr13:114314489-114324208	0	+	114323842	114324208	789624	3	154,84,421,	0,6659,9298,
#Partially deleted in new
chr13	114314520	114337626	chr13:114314520-114337626	0	+	114314520	114314520	8553170	2	123,70,	0,23036,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	114314530	114322441	chr13:114314530-114322441	0	+	114314530	114314530	8553170	3	113,123,379,	0,6579,7532,
#Partially deleted in new
chr13	114314547	114324425	chr13:114314547-114324425	0	+	114323842	114324425	789624	3	96,123,591,	0,6562,9287,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr13	114322199	114327321	chr13:114322199-114327321	1	+	114323842	114326281	0	1	5122,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr13	114329558	114333948	chr13:114329558-114333948	3	-	114329558	114329558	789624	3	287,113,114,	0,1107,4276,
#Partially deleted in new
chr13	114346166	114346637	chr13:114346166-114346637	7	+	114346166	114346166	16724991	1	471,	0,
#Deleted in new
chr13_KI270838v1_alt	14475	18126	chr13_KI270838v1_alt:14475-18126	3	+	14475	14475	789624	2	59,2770,	0,881,
#Deleted in new
chr13_KI270838v1_alt	114462	122734	chr13_KI270838v1_alt:114462-122734	3	+	114462	114462	789624	2	6225,647,	0,7625,
#Deleted in new
chr13_KI270838v1_alt	123542	132195	chr13_KI270838v1_alt:123542-132195	3	-	123542	123542	789624	3	190,300,167,	0,4673,8486,
#Deleted in new
chr13_KI270838v1_alt	177288	235659	chr13_KI270838v1_alt:177288-235659	3	+	177355	235519	789624	7	161,57,90,108,96,78,205,	0,16702,21730,22747,24750,56125,58166,
#Deleted in new
chr13_KI270838v1_alt	177324	200143	chr13_KI270838v1_alt:177324-200143	0	+	183419	200143	789624	6	125,89,230,57,90,108,	0,2288,5923,16666,21694,22711,
#Deleted in new
chr13_KI270838v1_alt	177357	202066	chr13_KI270838v1_alt:177357-202066	0	+	179649	202066	789624	6	92,89,57,90,108,28,	0,2255,16633,21661,22678,24681,
#Deleted in new
chr13_KI270838v1_alt	183247	235659	chr13_KI270838v1_alt:183247-235659	1	+	183419	235519	789624	6	230,90,108,96,78,205,	0,15771,16788,18791,50166,52207,
#Deleted in new
chr13_KI270838v1_alt	285978	305684	chr13_KI270838v1_alt:285978-305684	3	-	286962	305684	789624	5	1143,117,141,132,89,	0,4572,14036,19023,19617,
#Deleted in new
chr13_KI270838v1_alt	286813	290793	chr13_KI270838v1_alt:286813-290793	0	-	286813	286813	8553170	2	308,243,	0,3737,
#Deleted in new
chr13_KI270838v1_alt	299776	305684	chr13_KI270838v1_alt:299776-305684	0	-	299879	305684	789624	4	130,141,132,89,	0,238,5225,5819,
#Deleted in new
chr13_KI270840v1_alt	26064	26554	chr13_KI270840v1_alt:26064-26554	7	-	26064	26064	16724991	1	490,	0,
#Deleted in new
chr13_KI270840v1_alt	28355	29064	chr13_KI270840v1_alt:28355-29064	7	+	28355	28355	16724991	1	709,	0,
#Deleted in new
chr13_KI270840v1_alt	35729	36546	chr13_KI270840v1_alt:35729-36546	7	+	35729	35729	16724991	1	817,	0,
#Deleted in new
chr13_KI270840v1_alt	43379	44368	chr13_KI270840v1_alt:43379-44368	7	-	43379	43379	16724991	3	122,61,298,	0,304,691,
#Deleted in new
chr13_KI270840v1_alt	108928	109668	chr13_KI270840v1_alt:108928-109668	7	-	108928	108928	16724991	1	740,	0,
#Deleted in new
chr13_KI270840v1_alt	111479	111698	chr13_KI270840v1_alt:111479-111698	7	+	111479	111479	16724991	1	219,	0,
#Deleted in new
chr13_KI270840v1_alt	118367	182333	chr13_KI270840v1_alt:118367-182333	7	-	118367	118367	16724991	22	229,180,325,130,110,133,385,529,181,162,71,73,29,86,70,31,56,136,107,174,115,309,	0,1556,2322,9948,12104,16999,18667,21555,23259,24834,29025,35054,35219,38059,42086,44796,51359,53948,55143,59156,59493,63657,
#Deleted in new
chr13_KI270840v1_alt	170834	170941	chr13_KI270840v1_alt:170834-170941	3	-	170834	170834	8553170	1	107,	0,
#Deleted in new
chr13_KI270840v1_alt	187599	187703	chr13_KI270840v1_alt:187599-187703	3	+	187599	187599	8553170	1	104,	0,
#Deleted in new
chr13_KI270842v1_alt	4333	10718	chr13_KI270842v1_alt:4333-10718	3	+	4333	8474	789624	3	125,202,2540,	0,1665,3845,
#Deleted in new
chr13_KI270842v1_alt	4333	8347	chr13_KI270842v1_alt:4333-8347	0	+	4333	4333	8553170	3	125,202,169,	0,1665,3845,
#Deleted in new
chr13_KI270842v1_alt	7585	10718	chr13_KI270842v1_alt:7585-10718	0	+	7585	7585	8553170	1	3133,	0,
#Deleted in new
chr13_KI270842v1_alt	22002	24579	chr13_KI270842v1_alt:22002-24579	3	-	22002	22002	789624	1	2577,	0,
#Deleted in new
chr13_KI270842v1_alt	32731	32807	chr13_KI270842v1_alt:32731-32807	3	+	32761	32807	789624	1	76,	0,
#Deleted in new
chr13_KI270842v1_alt	32734	32807	chr13_KI270842v1_alt:32734-32807	0	+	32761	32807	789624	1	73,	0,
#Deleted in new
chr13_KN538371v1_fix	16729	37105	chr13_KN538371v1_fix:16729-37105	3	-	19797	37023	8553170	7	3135,68,48,48,166,52,272,	0,11222,13636,14763,14891,16467,20104,
#Deleted in new
chr13_KN538371v1_fix	19573	33435	chr13_KN538371v1_fix:19573-33435	0	-	19573	19573	8553170	4	291,68,52,47,	0,8378,13623,13815,
#Deleted in new
chr13_KN538371v1_fix	40808	191702	chr13_KN538371v1_fix:40808-191702	3	-	42372	191580	789624	24	1640,184,104,209,83,107,74,78,78,107,124,75,115,149,157,105,77,73,81,77,95,104,118,177,	0,3892,10767,14813,17867,19108,25815,27669,29453,31424,33491,34479,35519,36386,37045,39686,42561,45671,46129,48093,59282,70334,92002,150717,
#Deleted in new
chr13_KN538371v1_fix	80499	95284	chr13_KN538371v1_fix:80499-95284	0	-	80499	80499	8553170	6	100,77,68,85,77,568,	0,2870,5980,6434,8402,14217,
#Deleted in new
chr13_KN538371v1_fix	166659	167911	chr13_KN538371v1_fix:166659-167911	3	-	166659	166659	8553170	2	200,180,	0,1072,
#Deleted in new
chr13_KN538372v1_fix	77881	141416	chr13_KN538372v1_fix:77881-141416	1	+	77881	141416	8553170	4	101,11,152,48,	0,45978,54801,63487,
#Deleted in new
chr13_KN538372v1_fix	77881	141416	chr13_KN538372v1_fix:77881-141416	3	+	77881	141416	8553170	4	101,11,152,48,	0,45978,54801,63487,
#Deleted in new
chr13_KN538372v1_fix	172669	177125	chr13_KN538372v1_fix:172669-177125	7	-	172669	172669	16724991	4	94,71,153,911,	0,432,2008,3545,
#Deleted in new
chr13_KN538372v1_fix	193956	230684	chr13_KN538372v1_fix:193956-230684	3	+	193956	193956	789624	8	115,59,25,87,66,62,34,1522,	0,23702,24229,27198,32182,34250,34777,35206,
#Deleted in new
chr13_KN538372v1_fix	205229	206126	chr13_KN538372v1_fix:205229-206126	7	-	205229	205229	16724991	1	897,	0,
#Deleted in new
chr13_KN538372v1_fix	234159	235824	chr13_KN538372v1_fix:234159-235824	1	+	234159	235824	8553170	1	1665,	0,
#Deleted in new
chr13_KN538372v1_fix	234159	235824	chr13_KN538372v1_fix:234159-235824	3	+	234159	235824	8553170	1	1665,	0,
#Deleted in new
chr13_KN538372v1_fix	247572	247695	chr13_KN538372v1_fix:247572-247695	7	-	247572	247572	16724991	1	123,	0,
#Deleted in new
chr13_KN538372v1_fix	252185	269482	chr13_KN538372v1_fix:252185-269482	7	-	252185	252185	16724991	12	147,114,113,127,188,137,150,153,197,87,131,164,	0,451,646,860,1219,4957,5618,7799,8363,13681,13902,17133,
#Deleted in new
chr13_KN538372v1_fix	277979	308594	chr13_KN538372v1_fix:277979-308594	7	-	277979	277979	16724991	6	411,405,402,390,410,378,	0,11177,14855,22132,27935,30237,
#Deleted in new
chr13_KN538372v1_fix	296213	297393	chr13_KN538372v1_fix:296213-297393	7	+	296213	296213	16724991	1	1180,	0,
#Deleted in new
chr13_KN538372v1_fix	330592	347256	chr13_KN538372v1_fix:330592-347256	7	+	330592	330592	16724991	8	120,117,39,187,165,110,66,213,	0,2886,7250,12557,12999,14500,15119,16451,
#Deleted in new
chr13_KN538373v1_fix	40127	43630	chr13_KN538373v1_fix:40127-43630	3	-	40127	40127	8553170	2	271,190,	0,3313,
#Deleted in new
chr14	16057471	16057622	chr14:16057471-16057622	3	+	16057471	16057471	8553170	1	151,	0,
#Partially deleted in new
chr14	18333725	18341859	chr14:18333725-18341859	7	+	18333725	18333725	16724991	5	175,106,174,113,166,	0,4247,4517,6888,7968,
#Partially deleted in new
chr14	18333825	18340659	chr14:18333825-18340659	4	+	18333825	18333825	16724991	3	71,174,46,	0,4417,6788,
#Partially deleted in new
chr14	18343037	18343144	chr14:18343037-18343144	3	+	18343037	18343037	8553170	1	107,	0,
#Partially deleted in new
chr14	18395625	18412264	chr14:18395625-18412264	7	-	18395625	18395625	16724991	3	1316,79,130,	0,15914,16509,
#Partially deleted in new
chr14	18418774	18419273	chr14:18418774-18419273	7	+	18418774	18418774	16724991	1	499,	0,
#Partially deleted in new
chr14	18555676	18596310	chr14:18555676-18596310	3	-	18555676	18555676	8553170	2	446,52,	0,40582,
#Partially deleted in new
chr14	18560046	18560191	chr14:18560046-18560191	7	+	18560046	18560046	16724991	1	145,	0,
#Partially deleted in new
chr14	18588273	18588315	chr14:18588273-18588315	7	-	18588273	18588273	16724991	1	42,	0,
#Partially deleted in new
chr14	18601044	18602129	chr14:18601044-18602129	3	+	18601116	18602097	789624	1	1085,	0,
#Partially deleted in new
chr14	18614387	18614561	chr14:18614387-18614561	7	+	18614387	18614387	16724991	1	174,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	18623851	18626787	chr14:18623851-18626787	7	-	18623851	18623851	16724991	1	2936,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	18630317	18633634	chr14:18630317-18633634	3	-	18630317	18630317	789624	3	1214,109,170,	0,2778,3147,
#Partially deleted in new
chr14	18631387	18650966	chr14:18631387-18650966	7	+	18631387	18631387	16724991	3	159,195,40,	0,17167,19539,
#Partially deleted in new
chr14	18634954	18637208	chr14:18634954-18637208	7	-	18634954	18634954	16724991	1	2254,	0,
#Partially deleted in new
chr14	18636042	18637421	chr14:18636042-18637421	3	+	18636042	18636042	8553170	2	225,338,	0,1041,
#Partially deleted in new
chr14	18645043	18646221	chr14:18645043-18646221	7	-	18645043	18645043	16724991	1	1178,	0,
#Partially deleted in new
chr14	18645990	18646503	chr14:18645990-18646503	7	+	18645990	18645990	16724991	1	513,	0,
#Partially deleted in new
chr14	18667248	18667370	chr14:18667248-18667370	7	+	18667248	18667248	16724991	1	122,	0,
#Partially deleted in new
chr14	18692031	18692408	chr14:18692031-18692408	7	+	18692031	18692031	16724991	1	377,	0,
#Partially deleted in new
chr14	18698638	18699978	chr14:18698638-18699978	7	-	18698638	18698638	16724991	1	1340,	0,
#Partially deleted in new
chr14	18702280	18702463	chr14:18702280-18702463	7	-	18702280	18702280	16724991	1	183,	0,
#Partially deleted in new
chr14	18709477	18712643	chr14:18709477-18712643	7	-	18709477	18709477	16724991	5	121,82,121,136,282,	0,1398,1950,2367,2884,
#Partially deleted in new
chr14	18710874	18712497	chr14:18710874-18712497	4	-	18710874	18710874	16724991	4	84,123,140,137,	0,552,969,1486,
#Partially deleted in new
chr14	18889083	18890424	chr14:18889083-18890424	7	-	18889083	18889083	16724991	1	1341,	0,
#Partially deleted in new
chr14	18899941	18909673	chr14:18899941-18909673	7	-	18899941	18899941	16724991	11	109,85,127,123,436,79,67,214,43,112,135,	0,1383,2226,2640,3144,4998,5316,6024,7413,9108,9597,
#Partially deleted in new
chr14	18912804	18916642	chr14:18912804-18916642	7	-	18912804	18912804	16724991	8	132,79,157,154,61,61,122,140,	0,838,1366,1621,2200,3241,3386,3698,
#Partially deleted in new
chr14	18914091	18916544	chr14:18914091-18916544	4	-	18914091	18914091	16724991	4	236,65,64,359,	0,913,1950,2094,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	18920108	18929815	chr14:18920108-18929815	3	+	18920108	18920108	8553170	3	299,154,120,	0,1514,9587,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	18929580	18934078	chr14:18929580-18934078	1	+	18929580	18929580	8553170	3	273,107,38,	0,2161,4460,
#Partially deleted in new
chr14	18944198	18945139	chr14:18944198-18945139	3	+	18944198	18944198	8553170	2	212,169,	0,772,
#Partially deleted in new
chr14	18967433	18998903	chr14:18967433-18998903	1	+	18967485	18997158	789624	11	573,115,174,107,138,71,71,45,167,119,237,	0,5326,5600,8615,10032,12640,17977,19735,20821,29607,31233,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	18967433	18998903	chr14:18967433-18998903	2	+	18967485	18974919	789624	12	573,115,174,256,107,138,71,71,45,167,119,237,	0,5326,5600,7327,8615,10032,12640,17977,19735,20821,29607,31233,
#Partially deleted in new
chr14	18967433	18999012	chr14:18967433-18999012	0	+	18967485	18997043	789624	12	573,115,174,107,138,71,71,45,167,49,119,346,	0,5326,5600,8615,10032,12640,17977,19735,20821,24961,29607,31233,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	18977179	18980742	chr14:18977179-18980742	3	-	18977179	18977179	789624	2	1691,395,	0,3168,
#Partially deleted in new
chr14	18978846	18978953	chr14:18978846-18978953	3	+	18978846	18978846	8553170	1	107,	0,
#Partially deleted in new
chr14	19024089	19055446	chr14:19024089-19055446	3	+	19024089	19024089	8553170	3	197,66,57,	0,7671,31300,
#Partially deleted in new
chr14	19026520	19028189	chr14:19026520-19028189	7	-	19026520	19026520	16724991	2	661,454,	0,1215,
#Partially deleted in new
chr14	19054340	19055551	chr14:19054340-19055551	1	+	19054340	19054340	8553170	2	371,162,	0,1049,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	19062315	19068183	chr14:19062315-19068183	5	+	19062315	19062315	16724991	5	151,111,115,112,107,	0,2267,3685,3920,5761,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	19062359	19107110	chr14:19062359-19107110	4	+	19062359	19062359	16724991	6	107,111,148,112,138,287,	0,2223,3608,3876,5717,44464,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	19062394	19075105	chr14:19062394-19075105	4	+	19062394	19062394	16724991	3	72,111,587,	0,2188,12124,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	19062405	19093914	chr14:19062405-19093914	4	+	19062405	19062405	16724991	2	61,999,	0,30510,
#Partially deleted in new
chr14	19104099	19104713	chr14:19104099-19104713	5	+	19104099	19104099	16724991	1	614,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	19124806	19129039	chr14:19124806-19129039	1	-	19124806	19124806	8553170	1	4233,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	19127735	19175530	chr14:19127735-19175530	0	-	19127735	19127735	8553170	2	514,72,	0,47723,
#Partially deleted in new
chr14	19130635	19155089	chr14:19130635-19155089	7	+	19130635	19130635	16724991	4	232,134,197,130,	0,6050,23500,24324,
#Partially deleted in new
chr14	19131841	19132890	chr14:19131841-19132890	7	-	19131841	19131841	16724991	1	1049,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	19152499	19175530	chr14:19152499-19175530	3	-	19152499	19152499	8553170	3	2927,112,72,	0,4330,22959,
#Partially deleted in new
chr14	19180290	19181269	chr14:19180290-19181269	7	+	19180290	19180290	16724991	1	979,	0,
#Deleted in new
chr14	19199762	19200279	chr14:19199762-19200279	7	-	19199762	19199762	16724991	1	517,	0,
#Deleted in new
chr14	19220795	19220912	chr14:19220795-19220912	7	-	19220795	19220795	16724991	1	117,	0,
#Deleted in new
chr14	19228897	19229945	chr14:19228897-19229945	7	-	19228897	19228897	16724991	1	1048,	0,
#Partially deleted in new
chr14	19244903	19269380	chr14:19244903-19269380	7	-	19244903	19244903	16724991	4	77,199,139,232,	0,761,18279,24245,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	19244961	19247673	chr14:19244961-19247673	3	+	19244961	19244961	8553170	1	2712,	0,
#Deleted in new
chr14	19267114	19268164	chr14:19267114-19268164	7	+	19267114	19267114	16724991	1	1050,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	19292525	19337645	chr14:19292525-19337645	4	-	19292525	19292525	16724991	4	3826,91,136,66,	0,14495,38956,45054,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	19292916	19337686	chr14:19292916-19337686	4	-	19292916	19292916	16724991	6	287,138,112,148,111,107,	0,38918,40785,41017,42435,44663,
#Deleted in new
chr14	19295305	19295921	chr14:19295305-19295921	5	-	19295305	19295305	16724991	1	616,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	19298696	19337669	chr14:19298696-19337669	4	-	19298696	19298696	16724991	8	5318,91,136,114,112,148,111,90,	0,8324,32785,33138,35005,35237,36655,38883,
#Partially deleted in new
chr14	19301703	19316800	chr14:19301703-19316800	7	+	19301703	19301703	16724991	3	264,88,200,	0,7402,14897,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	19306691	19316914	chr14:19306691-19316914	5	+	19306691	19306691	16724991	3	321,88,314,	0,2414,9909,
#Deleted in new
chr14	19316113	19316773	chr14:19316113-19316773	5	+	19316113	19316113	16724991	2	142,174,	0,486,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	19331865	19337730	chr14:19331865-19337730	5	-	19331865	19331865	16724991	5	107,112,115,111,151,	0,1836,2068,3486,5714,
#Partially deleted in new
chr14	19344577	19375876	chr14:19344577-19375876	0	-	19344577	19344577	8553170	3	57,66,135,	0,23615,31164,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	19348215	19384587	chr14:19348215-19384587	3	-	19348215	19348215	8553170	4	483,262,66,3411,	0,8655,19977,32961,
#Deleted in new
chr14	19371821	19373490	chr14:19371821-19373490	7	+	19371821	19371821	16724991	1	1669,	0,
#Partially deleted in new
chr14	19402485	19434341	chr14:19402485-19434341	3	-	19404617	19434289	789624	11	624,119,167,45,71,71,138,107,174,115,573,	0,2131,10868,12076,13802,19138,21679,23120,26056,26389,31283,
#Partially deleted in new
chr14	19402763	19434341	chr14:19402763-19434341	0	-	19404732	19434289	789624	12	346,119,49,167,45,71,71,138,107,174,115,573,	0,1853,6569,10590,11798,13524,18860,21401,22842,25778,26111,31005,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	19402872	19434341	chr14:19402872-19434341	0	-	19426829	19434289	789624	12	237,119,167,45,71,71,138,107,256,174,115,573,	0,1744,10481,11689,13415,18751,21292,22733,23860,25669,26002,30896,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	19420974	19425017	chr14:19420974-19425017	3	+	19420974	19420974	789624	2	446,2120,	0,1923,
#Deleted in new
chr14	19422814	19422921	chr14:19422814-19422921	3	-	19422814	19422814	8553170	1	107,	0,
#Deleted in new
chr14	19485335	19489148	chr14:19485335-19489148	7	+	19485335	19485335	16724991	8	106,130,64,61,85,163,43,135,	0,301,513,1551,2040,2283,2922,3678,
#Deleted in new
chr14	19485409	19487712	chr14:19485409-19487712	4	+	19485409	19485409	16724991	4	359,64,65,88,	0,439,1474,2215,
#Partially deleted in new
chr14	19492280	19501740	chr14:19492280-19501740	7	+	19492280	19492280	16724991	11	134,124,154,223,73,79,443,127,121,82,121,	0,513,2157,3486,4344,4654,6146,6965,7388,7979,9339,
#Partially deleted in new
chr14	19499736	19677836	chr14:19499736-19677836	0	+	19499736	19499736	8553170	7	54,84,110,43,98,48,112,	0,118269,119634,153360,156420,160794,177988,
#Partially deleted in new
chr14	19499739	19677923	chr14:19499739-19677923	3	+	19499739	19499739	8553170	6	51,84,110,98,48,199,	0,118266,119631,156417,160791,177985,
#Deleted in new
chr14	19511243	19511712	chr14:19511243-19511712	7	+	19511243	19511243	16724991	1	469,	0,
#Partially deleted in new
chr14	19612190	19619490	chr14:19612190-19619490	7	+	19612190	19612190	16724991	8	154,248,79,436,28,123,84,130,	0,1329,2496,3993,4809,5225,5815,7170,
#Deleted in new
chr14	19629005	19630340	chr14:19629005-19630340	7	+	19629005	19629005	16724991	1	1335,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	19637224	19641306	chr14:19637224-19641306	3	+	19637224	19637224	8553170	3	42,82,1713,	0,750,2369,
#Deleted in new
chr14	19653622	19653742	chr14:19653622-19653742	7	-	19653622	19653622	16724991	1	120,	0,
#Partially deleted in new
chr14	19664097	19683677	chr14:19664097-19683677	7	-	19664097	19664097	16724991	3	44,179,188,	0,2211,19392,
#Deleted in new
chr14	19668541	19669056	chr14:19668541-19669056	7	-	19668541	19668541	16724991	1	515,	0,
#Deleted in new
chr14	19668828	19670003	chr14:19668828-19670003	7	+	19668828	19668828	16724991	1	1175,	0,
#Deleted in new
chr14	19677643	19679016	chr14:19677643-19679016	3	-	19677643	19677643	8553170	2	338,225,	0,1148,
#Deleted in new
chr14	19677836	19680104	chr14:19677836-19680104	7	+	19677836	19677836	16724991	1	2268,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	19681419	19684739	chr14:19681419-19684739	3	+	19681419	19681419	8553170	3	170,109,1214,	0,431,2106,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	19688260	19691194	chr14:19688260-19691194	7	+	19688260	19688260	16724991	1	2934,	0,
#Deleted in new
chr14	19700478	19700650	chr14:19700478-19700650	7	-	19700478	19700478	16724991	1	172,	0,
#Partially deleted in new
chr14	19712903	19714332	chr14:19712903-19714332	3	-	19712935	19713916	789624	2	1045,40,	0,1389,
#Partially deleted in new
chr14	19712935	19713883	chr14:19712935-19713883	1	-	19712935	19713883	789624	1	948,	0,
#Partially deleted in new
chr14	19719014	19827513	chr14:19719014-19827513	0	+	19827448	19827513	789624	5	102,95,96,198,74,	0,14354,42873,103239,108425,
#Partially deleted in new
chr14	19733354	19734302	chr14:19733354-19734302	7	-	19733354	19733354	16724991	1	948,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	19743570	19749469	chr14:19743570-19749469	1	+	19743669	19748369	789624	2	101,2064,	0,3835,
#Partially deleted in new
chr14	19747427	19748369	chr14:19747427-19748369	3	+	19747427	19748369	789624	1	942,	0,
#Partially deleted in new
chr14	19759867	19760774	chr14:19759867-19760774	7	+	19759867	19759867	16724991	1	907,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	19773503	19783696	chr14:19773503-19783696	3	+	19780322	19781264	789624	2	90,3403,	0,6790,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	19773503	19783696	chr14:19773503-19783696	0	+	19773503	19773503	8553170	2	90,3142,	0,7051,
#Partially deleted in new
chr14	19773503	19782803	chr14:19773503-19782803	0	+	19773503	19773503	8553170	3	90,245,78,	0,7051,9222,
#Partially deleted in new
chr14	19780241	19781357	chr14:19780241-19781357	1	+	19780322	19781264	789624	1	1116,	0,
#Partially deleted in new
chr14	19796344	19797293	chr14:19796344-19797293	7	+	19796344	19796344	16724991	1	949,	0,
#Partially deleted in new
chr14	19821934	19830253	chr14:19821934-19830253	0	+	19827448	19828372	789624	2	517,2814,	0,5505,
#Partially deleted in new
chr14	19827448	19828372	chr14:19827448-19828372	1	+	19827448	19828372	789624	1	924,	0,
#Partially deleted in new
chr14	19847366	19848263	chr14:19847366-19848263	7	+	19847366	19847366	16724991	1	897,	0,
#Partially deleted in new
chr14	19868196	19869143	chr14:19868196-19869143	3	-	19868196	19869143	8553170	1	947,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	19875141	19883932	chr14:19875141-19883932	0	+	19875141	19875141	8553170	3	993,140,4991,	0,1103,3800,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	19875141	19883932	chr14:19875141-19883932	0	+	19875141	19875141	8553170	4	993,140,162,4591,	0,1103,3800,4200,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	19875141	19883932	chr14:19875141-19883932	3	+	19876267	19877212	789624	2	993,7688,	0,1103,
#Partially deleted in new
chr14	19876231	19877309	chr14:19876231-19877309	1	+	19876267	19877212	789624	1	1078,	0,
#Partially deleted in new
chr14	19905916	19906600	chr14:19905916-19906600	7	+	19905916	19905916	16724991	1	684,	0,
#Partially deleted in new
chr14	19908095	19908649	chr14:19908095-19908649	7	-	19908095	19908095	16724991	1	554,	0,
#Deleted in new
chr14	19920581	19921659	chr14:19920581-19921659	3	+	19920606	19921578	789624	1	1078,	0,
#Partially deleted in new
chr14	19930916	19936757	chr14:19930916-19936757	3	+	19935666	19936602	789624	2	229,1110,	0,4731,
#Partially deleted in new
chr14	19931043	19936757	chr14:19931043-19936757	1	+	19935666	19936602	789624	3	102,146,1110,	0,170,4604,
#Deleted in new
chr14	19935607	19936683	chr14:19935607-19936683	1	+	19935666	19936602	789624	1	1076,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	19954489	19957996	chr14:19954489-19957996	7	+	19954489	19954489	16724991	2	83,1423,	0,2084,
#Deleted in new
chr14	19956599	19957568	chr14:19956599-19957568	5	+	19956599	19956599	16724991	1	969,	0,
#Deleted in new
chr14	19975443	19976659	chr14:19975443-19976659	1	+	19975518	19976565	789624	1	1216,	0,
#Deleted in new
chr14	19975443	19976659	chr14:19975443-19976659	3	+	19975590	19976565	789624	1	1216,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	19999912	20004760	chr14:19999912-20004760	3	+	20002162	20003105	8553170	3	97,68,2613,	0,207,2235,
#Deleted in new
chr14	20002162	20003163	chr14:20002162-20003163	1	+	20002162	20003163	789624	3	525,375,21,	0,529,980,
#Partially deleted in new
chr14	20014142	20019307	chr14:20014142-20019307	3	-	20014260	20015193	789624	2	1080,165,	0,5000,
#Deleted in new
chr14	20014260	20015193	chr14:20014260-20015193	1	-	20014260	20015193	789624	1	933,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	20029398	20036038	chr14:20029398-20036038	1	-	20033843	20034758	789624	2	5583,397,	0,6243,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	20029398	20036038	chr14:20029398-20036038	3	-	20033843	20034758	789624	2	5583,101,	0,6539,
#Deleted in new
chr14	20033843	20034758	chr14:20033843-20034758	1	-	20033843	20034758	789624	1	915,	0,
#Deleted in new
chr14	20043915	20044827	chr14:20043915-20044827	7	+	20043915	20043915	16724991	1	912,	0,
#Deleted in new
chr14	20060044	20060983	chr14:20060044-20060983	3	+	20060044	20060983	789624	1	939,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	20090129	20090227	chr14:20090129-20090227	7	+	20090129	20090129	16724991	1	98,	0,
#Deleted in new
chr14	20093352	20094263	chr14:20093352-20094263	7	+	20093352	20093352	16724991	1	911,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	20110738	20122199	chr14:20110738-20122199	1	+	20117499	20118438	789624	2	154,4732,	0,6729,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	20110738	20122199	chr14:20110738-20122199	1	+	20117499	20118438	789624	3	154,182,4732,	0,1171,6729,
#Deleted in new
chr14	20117406	20118438	chr14:20117406-20118438	3	+	20117406	20118438	789624	1	1032,	0,
#Partially deleted in new
chr14	20138819	20145471	chr14:20138819-20145471	3	+	20143735	20144662	789624	3	71,369,1747,	0,2023,4905,
#Partially deleted in new
chr14	20143735	20144662	chr14:20143735-20144662	1	+	20143735	20144662	789624	1	927,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	20149231	20149745	chr14:20149231-20149745	7	+	20149231	20149231	16724991	1	514,	0,
#Partially deleted in new
chr14	20173631	20173813	chr14:20173631-20173813	7	-	20173631	20173631	16724991	1	182,	0,
#Partially deleted in new
chr14	20179188	20180156	chr14:20179188-20180156	7	+	20179188	20179188	16724991	1	968,	0,
#Partially deleted in new
chr14	20183924	20184298	chr14:20183924-20184298	7	-	20183924	20183924	16724991	1	374,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	20190893	20201075	chr14:20190893-20201075	1	+	20197437	20198373	789624	2	773,3642,	0,6540,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	20190895	20201075	chr14:20190895-20201075	1	+	20197437	20198373	789624	2	144,3642,	0,6538,
#Partially deleted in new
chr14	20197335	20198373	chr14:20197335-20198373	3	+	20197335	20198373	789624	1	1038,	0,
#Partially deleted in new
chr14	20204605	20210498	chr14:20204605-20210498	7	+	20204605	20204605	16724991	2	88,1237,	0,4656,
#Partially deleted in new
chr14	20209272	20210198	chr14:20209272-20210198	5	+	20209272	20209272	16724991	1	926,	0,
#Partially deleted in new
chr14	20223709	20224702	chr14:20223709-20224702	3	+	20223709	20224702	789624	1	993,	0,
#Partially deleted in new
chr14	20229401	20230346	chr14:20229401-20230346	3	+	20229401	20230346	8553170	1	945,	0,
#Partially deleted in new
chr14	20239285	20244349	chr14:20239285-20244349	1	+	20242821	20243766	789624	2	46,1539,	0,3525,
#Partially deleted in new
chr14	20242738	20243820	chr14:20242738-20243820	3	+	20242791	20243766	789624	1	1082,	0,
#Partially deleted in new
chr14	20242738	20243820	chr14:20242738-20243820	1	+	20242821	20243766	789624	1	1082,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	20256557	20287740	chr14:20256557-20287740	0	-	20256557	20256557	8553170	5	128,58,15,121,553,	0,1160,1627,5055,30630,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	20260479	20264308	chr14:20260479-20264308	3	-	20260479	20260479	8553170	1	3829,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	20260583	20261614	chr14:20260583-20261614	0	-	20260583	20260583	8553170	2	395,226,	0,805,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	20286227	20305994	chr14:20286227-20305994	3	-	20289626	20305937	0	10	3519,145,215,147,57,92,151,212,133,108,	0,5755,9084,9480,10162,12569,13070,14379,15605,19659,
#Partially deleted in new
chr14	20289130	20305941	chr14:20289130-20305941	0	-	20299389	20305937	789624	10	616,145,215,147,57,92,151,144,133,55,	0,2852,6181,6577,7259,9666,10167,11544,12702,16756,
#Partially deleted in new
chr14	20289130	20305948	chr14:20289130-20305948	0	-	20289130	20289130	8553170	9	616,3544,147,57,92,151,212,133,62,	0,2852,6577,7259,9666,10167,11476,12702,16756,
#Partially deleted in new
chr14	20300336	20305953	chr14:20300336-20305953	0	-	20300336	20300336	8553170	3	482,133,67,	0,1496,5550,
#Partially deleted in new
chr14	20300808	20305960	chr14:20300808-20305960	0	-	20300808	20301869	789624	3	10,133,605,	0,1024,4547,
#Deleted in new
chr14	20305729	20306811	chr14:20305729-20306811	3	+	20305729	20305729	8553170	2	373,375,	0,707,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	20311367	20333312	chr14:20311367-20333312	1	-	20311549	20316523	789624	6	385,334,334,115,78,59,	0,2100,4859,14171,15348,21886,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	20311367	20333010	chr14:20311367-20333010	1	-	20311549	20316523	789624	7	385,334,334,115,78,200,167,	0,2100,4859,14171,15348,17806,21476,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	20311367	20333312	chr14:20311367-20333312	3	-	20311549	20316523	789624	8	385,334,334,181,115,78,200,59,	0,2100,4859,6426,14171,15348,17806,21886,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	20311369	20333288	chr14:20311369-20333288	1	-	20311549	20316523	789624	7	383,334,334,115,78,200,35,	0,2098,4857,14169,15346,17804,21884,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	20311369	20329380	chr14:20311369-20329380	1	-	20311549	20316523	789624	7	383,334,334,180,115,78,207,	0,2098,4857,6425,14169,15346,17804,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	20311682	20316265	chr14:20311682-20316265	0	-	20315795	20316265	789624	4	70,334,70,39,	0,1785,4098,4544,
#Partially deleted in new
chr14	20311703	20333303	chr14:20311703-20333303	0	-	20315606	20316523	789624	8	49,334,134,334,115,78,200,50,	0,1764,3781,4523,13835,15012,17470,21550,
#Partially deleted in new
chr14	20313636	20333282	chr14:20313636-20333282	0	-	20313636	20316523	789624	6	165,334,115,78,200,439,	0,2590,11902,13079,15537,19207,
#Partially deleted in new
chr14	20314210	20316408	chr14:20314210-20316408	0	-	20315606	20316408	789624	3	439,134,182,	0,1274,2016,
#Partially deleted in new
chr14	20316413	20329374	chr14:20316413-20329374	0	-	20316413	20320343	789624	5	147,105,115,78,201,	0,3874,9125,10302,12760,
#Partially deleted in new
chr14	20316511	20329373	chr14:20316511-20329373	0	-	20316511	20316523	8553170	4	49,115,78,150,	0,9027,10204,12712,
#Partially deleted in new
chr14	20317595	20329270	chr14:20317595-20329270	0	-	20317595	20317595	8553170	4	379,115,78,97,	0,7943,9120,11578,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	20319050	20333312	chr14:20319050-20333312	0	-	20319050	20319050	8553170	5	53,115,78,200,59,	0,6488,7665,10123,14203,
#Deleted in new
chr14	20323178	20323326	chr14:20323178-20323326	3	-	20323178	20323178	5263520	1	148,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	20325538	20330888	chr14:20325538-20330888	0	-	20325538	20325538	8553170	4	115,78,200,363,	0,1177,3635,4987,
#Partially deleted in new
chr14	20325588	20333273	chr14:20325588-20333273	0	-	20325588	20325588	8553170	3	65,78,430,	0,1127,7255,
#Deleted in new
chr14	20326449	20326526	chr14:20326449-20326526	3	-	20326449	20326449	789624	1	77,	0,
#Deleted in new
chr14	20343047	20343685	chr14:20343047-20343685	3	-	20343047	20343047	8553170	1	638,	0,
#Deleted in new
chr14	20343074	20343407	chr14:20343074-20343407	3	-	20343074	20343074	789624	1	333,	0,
#Partially deleted in new
chr14	20343581	20357905	chr14:20343581-20357905	1	+	20343641	20357797	0	16	106,156,71,51,97,76,103,163,139,64,135,128,100,99,125,268,	0,1350,1812,3281,6944,7465,8663,10503,11227,12170,12315,12725,13008,13469,13814,14056,
#Partially deleted in new
chr14	20343614	20357904	chr14:20343614-20357904	3	+	20343641	20357797	0	16	73,195,71,51,97,76,103,163,139,64,135,128,100,99,125,267,	0,1317,1779,3248,6911,7432,8630,10470,11194,12137,12282,12692,12975,13436,13781,14023,
#Partially deleted in new
chr14	20343627	20354947	chr14:20343627-20354947	0	+	20343641	20352253	789624	7	60,156,71,51,103,163,113,	0,1304,1766,3235,8617,10457,11207,
#Partially deleted in new
chr14	20343636	20357903	chr14:20343636-20357903	1	+	20343641	20357524	789624	15	51,195,71,51,97,76,103,163,139,64,135,128,100,99,508,	0,1295,1757,3226,6889,7410,8608,10448,11172,12115,12260,12670,12953,13414,13759,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	20344232	20346888	chr14:20344232-20346888	3	-	20344232	20344232	8553170	2	144,324,	0,2332,
#Partially deleted in new
chr14	20350698	20354108	chr14:20350698-20354108	0	+	20350698	20350698	8553170	3	424,103,24,	0,1546,3386,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	20352512	20354123	chr14:20352512-20354123	0	+	20352512	20352512	8553170	2	491,39,	0,1572,
#Deleted in new
chr14	20354641	20355955	chr14:20354641-20355955	0	+	20354641	20354641	8553170	3	306,64,59,	0,1110,1255,
#Deleted in new
chr14	20355160	20356392	chr14:20355160-20356392	0	+	20355160	20355160	8553170	3	655,135,86,	0,736,1146,
#Deleted in new
chr14	20355781	20357776	chr14:20355781-20357776	0	+	20355781	20357673	789624	6	34,135,128,100,99,139,	0,115,525,808,1269,1856,
#Deleted in new
chr14	20355795	20357509	chr14:20355795-20357509	0	+	20355795	20355795	8553170	5	20,135,128,100,459,	0,101,511,794,1255,
#Deleted in new
chr14	20355909	20356750	chr14:20355909-20356750	0	+	20355909	20355909	8553170	2	122,444,	0,397,
#Boundary problem: need 55, got 0, diff 55, mapped 0.0
chr14	20365666	20413421	chr14:20365666-20413421	3	-	20368436	20408439	789624	55	2893,105,233,106,97,144,125,137,133,77,133,108,114,161,213,154,213,156,100,125,124,241,115,89,134,151,133,93,180,157,176,195,118,114,125,121,177,159,60,131,78,159,169,178,91,110,158,125,72,162,162,135,168,591,17,	0,3131,3677,4007,5551,5822,7066,7344,7603,7840,8011,8762,10088,10437,11613,11933,12357,12713,13087,13314,14263,14568,15264,15646,15886,16246,16557,16956,17507,17821,18076,18371,18724,18933,19318,20408,20780,22238,23571,23943,25014,25271,25932,29783,30192,30954,35317,35790,37710,38056,38944,39784,40566,42206,47738,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	20365666	20373100	chr14:20365666-20373100	0	-	20369363	20373100	789624	9	1437,652,105,211,106,97,144,125,90,	0,2241,3131,3677,4007,5551,5822,7066,7344,
#Boundary problem: need 43, got 0, diff 43, mapped 0.0
chr14	20367630	20391745	chr14:20367630-20391745	0	-	20368850	20391745	789624	43	929,83,233,106,97,144,125,137,133,77,133,108,114,161,213,154,213,156,100,125,124,241,115,89,134,151,133,72,180,157,176,195,118,114,125,121,177,159,60,131,78,159,147,	0,1167,1713,2043,3587,3858,5102,5380,5639,5876,6047,6798,8124,8473,9649,9969,10393,10749,11123,11350,12299,12604,13300,13682,13922,14282,14593,14992,15543,15857,16112,16407,16760,16969,17354,18444,18816,20274,21607,21979,23050,23307,23968,
#Partially deleted in new
chr14	20368393	20413419	chr14:20368393-20413419	0	-	20381379	20408439	789624	54	166,105,233,106,97,144,125,137,133,77,133,108,114,161,213,154,213,156,100,125,124,241,115,89,151,133,93,180,157,176,195,118,114,125,121,177,159,60,131,78,159,169,178,91,110,158,125,72,162,162,135,168,591,15,	0,404,950,1280,2824,3095,4339,4617,4876,5113,5284,6035,7361,7710,8886,9206,9630,9986,10360,10587,11536,11841,12537,12919,13519,13830,14229,14780,15094,15349,15644,15997,16206,16591,17681,18053,19511,20844,21216,22287,22544,23205,27056,27465,28227,32590,33063,34983,35329,36217,37057,37839,39479,45011,
#Partially deleted in new
chr14	20368393	20413420	chr14:20368393-20413420	1	-	20368436	20408439	789624	53	166,105,233,106,97,144,125,137,133,77,133,108,114,161,213,154,213,156,100,125,124,241,115,89,134,151,133,93,180,157,176,195,118,114,125,121,177,159,60,131,78,159,169,178,91,110,158,125,72,135,168,591,16,	0,404,950,1280,2824,3095,4339,4617,4876,5113,5284,6035,7361,7710,8886,9206,9630,9986,10360,10587,11536,11841,12537,12919,13159,13519,13830,14229,14780,15094,15349,15644,15997,16206,16591,17681,18053,19511,20844,21216,22287,22544,23205,27056,27465,28227,32590,33063,34983,37057,37839,39479,45011,
#Partially deleted in new
chr14	20369366	20373080	chr14:20369366-20373080	0	-	20369366	20373080	789624	5	210,106,97,119,70,	0,307,1851,2122,3644,
#Partially deleted in new
chr14	20371517	20382262	chr14:20371517-20382262	0	-	20381379	20382262	789624	20	115,137,133,77,133,108,114,161,213,154,213,156,100,125,124,241,115,89,151,39,	0,1493,1752,1989,2160,2911,4237,4586,5762,6082,6506,6862,7236,7463,8412,8717,9413,9795,10395,10706,
#Partially deleted in new
chr14	20373506	20378209	chr14:20373506-20378209	0	-	20377432	20378209	789624	8	77,133,108,114,161,213,63,186,	0,171,922,2248,2597,3773,4093,4517,
#Partially deleted in new
chr14	20373783	20378044	chr14:20373783-20378044	0	-	20377432	20378044	789624	8	27,108,114,161,79,68,154,21,	0,645,1971,2320,3496,3641,3816,4240,
#Partially deleted in new
chr14	20400666	20403857	chr14:20400666-20403857	0	-	20400666	20400666	8553170	3	475,125,481,	0,790,2710,
#Partially deleted in new
chr14	20407941	20413429	chr14:20407941-20413429	0	-	20407941	20408439	789624	2	522,59,	0,5429,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	20414986	20415098	chr14:20414986-20415098	7	+	20414986	20414986	16724991	1	112,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	20425851	20436158	chr14:20425851-20436158	3	-	20428848	20435811	789624	5	3550,168,925,767,60,	0,3650,3943,9212,10247,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	20425869	20435811	chr14:20425869-20435811	1	-	20429401	20435811	789624	4	3563,168,925,748,	0,3632,3925,9194,
#Partially deleted in new
chr14	20428810	20435642	chr14:20428810-20435642	1	-	20428848	20430675	789624	4	591,168,925,179,	0,691,984,6653,
#Partially deleted in new
chr14	20437981	20441268	chr14:20437981-20441268	7	+	20437981	20437981	16724991	10	28,46,76,85,97,106,137,76,142,97,	0,317,524,683,1057,1362,2231,2683,2892,3190,
#Partially deleted in new
chr14	20438668	20440774	chr14:20438668-20440774	4	+	20438668	20438668	16724991	3	79,152,123,	0,315,1983,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	20446410	20450879	chr14:20446410-20450879	0	-	20446410	20446410	8553170	7	869,99,76,91,66,79,1978,	0,1011,1204,1493,1695,2322,2491,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	20446667	20455105	chr14:20446667-20455105	3	-	20447239	20454683	789624	11	612,99,76,91,66,79,50,96,176,120,537,	0,754,947,1236,1438,2065,2296,2503,5306,5661,7901,
#Deleted in new
chr14	20447062	20449557	chr14:20447062-20449557	0	-	20447062	20447062	8553170	5	217,99,557,79,594,	0,359,552,1670,1901,
#Deleted in new
chr14	20447064	20447688	chr14:20447064-20447688	0	-	20447064	20447064	8553170	2	456,74,	0,550,
#Deleted in new
chr14	20447138	20449398	chr14:20447138-20449398	0	-	20447138	20447138	8553170	7	141,99,76,91,66,79,435,	0,283,476,765,967,1594,1825,
#Partially deleted in new
chr14	20447630	20452448	chr14:20447630-20452448	0	-	20449262	20452448	789624	8	60,91,66,79,50,131,176,120,	0,273,475,1102,1333,1540,4343,4698,
#Deleted in new
chr14	20447677	20449273	chr14:20447677-20449273	0	-	20447677	20447677	8553170	6	13,91,66,79,112,103,	0,226,428,1055,1224,1493,
#Deleted in new
chr14	20448023	20449170	chr14:20448023-20449170	0	-	20448023	20448023	8553170	2	148,438,	0,709,
#Partially deleted in new
chr14	20449207	20454812	chr14:20449207-20454812	0	-	20449207	20454683	789624	4	59,155,120,244,	0,2787,3121,5361,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	20449221	20454793	chr14:20449221-20454793	0	-	20449221	20449221	8553170	5	45,196,176,120,225,	0,2035,2752,3107,5347,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	20451304	20451918	chr14:20451304-20451918	3	+	20451304	20451304	8553170	2	144,334,	0,280,
#Partially deleted in new
chr14	20451958	20455089	chr14:20451958-20455089	0	-	20451958	20451958	8553170	2	490,521,	0,2610,
#Partially deleted in new
chr14	20451977	20455053	chr14:20451977-20455053	0	-	20451977	20451977	8553170	3	172,173,485,	0,298,2591,
#Deleted in new
chr14	20455190	20457772	chr14:20455190-20457772	3	+	20455645	20457508	0	5	148,126,188,193,782,	0,387,723,1477,1800,
#Deleted in new
chr14	20455194	20457767	chr14:20455194-20457767	1	+	20455645	20457508	0	5	200,126,188,193,777,	0,383,719,1473,1796,
#Deleted in new
chr14	20455200	20457342	chr14:20455200-20457342	0	+	20455645	20457342	789624	5	40,126,188,193,352,	0,377,713,1467,1790,
#Deleted in new
chr14	20455214	20457139	chr14:20455214-20457139	0	+	20455214	20455214	8553170	4	124,188,193,149,	0,699,1453,1776,
#Deleted in new
chr14	20455218	20455887	chr14:20455218-20455887	0	+	20455218	20455218	8553170	2	485,86,	0,583,
#Deleted in new
chr14	20455225	20457767	chr14:20455225-20457767	1	+	20455645	20457508	0	5	103,126,188,193,777,	0,352,688,1442,1765,
#Deleted in new
chr14	20455225	20457734	chr14:20455225-20457734	0	+	20455225	20455225	8553170	4	478,188,193,744,	0,688,1442,1765,
#Deleted in new
chr14	20455225	20457002	chr14:20455225-20457002	0	+	20455225	20455225	8553170	4	169,524,193,12,	0,352,1442,1765,
#Deleted in new
chr14	20455225	20456860	chr14:20455225-20456860	0	+	20455645	20456860	789624	4	164,126,188,193,	0,352,688,1442,
#Deleted in new
chr14	20455226	20456683	chr14:20455226-20456683	0	+	20455645	20455935	789624	4	168,196,188,16,	0,351,687,1441,
#Deleted in new
chr14	20455226	20456744	chr14:20455226-20456744	0	+	20455645	20456744	789624	4	175,126,188,77,	0,351,687,1441,
#Deleted in new
chr14	20455238	20457366	chr14:20455238-20457366	0	+	20455645	20457366	789624	5	156,126,188,193,289,	0,339,675,1429,1839,
#Deleted in new
chr14	20455239	20457738	chr14:20455239-20457738	0	+	20455239	20455239	8553170	3	862,193,748,	0,1428,1751,
#Deleted in new
chr14	20455244	20456031	chr14:20455244-20456031	0	+	20455766	20456031	789624	3	150,36,118,	0,493,669,
#Deleted in new
chr14	20455246	20457074	chr14:20455246-20457074	0	+	20455645	20457074	789624	5	182,126,188,193,84,	0,331,667,1421,1744,
#Deleted in new
chr14	20455246	20457767	chr14:20455246-20457767	1	+	20455645	20457140	789624	3	148,95,645,	0,331,1876,
#Deleted in new
chr14	20455247	20457119	chr14:20455247-20457119	0	+	20455766	20457119	789624	5	91,39,188,193,129,	0,487,666,1420,1743,
#Deleted in new
chr14	20455256	20457302	chr14:20455256-20457302	0	+	20455256	20455256	8553170	4	138,188,193,312,	0,657,1411,1734,
#Deleted in new
chr14	20455264	20457089	chr14:20455264-20457089	0	+	20455766	20457089	789624	5	64,196,188,193,99,	0,313,649,1403,1726,
#Deleted in new
chr14	20456006	20457222	chr14:20456006-20457222	0	+	20456006	20457222	789624	3	95,193,163,	0,661,1053,
#Deleted in new
chr14	20457718	20461612	chr14:20457718-20461612	3	-	20458558	20461325	789624	7	984,91,53,106,107,191,429,	0,1487,1669,1909,2473,2936,3465,
#Deleted in new
chr14	20457857	20461465	chr14:20457857-20461465	1	-	20458558	20461325	789624	7	845,91,53,106,107,191,303,	0,1348,1530,1770,2334,2797,3305,
#Deleted in new
chr14	20457857	20459691	chr14:20457857-20459691	0	-	20458331	20459691	789624	5	489,114,91,53,64,	0,731,1348,1530,1770,
#Deleted in new
chr14	20457857	20461401	chr14:20457857-20461401	0	-	20457857	20457857	8553170	2	1439,2014,	0,1530,
#Deleted in new
chr14	20458385	20460742	chr14:20458385-20460742	0	-	20458385	20458385	8553170	5	317,91,53,106,551,	0,820,1002,1242,1806,
#Deleted in new
chr14	20458616	20459592	chr14:20458616-20459592	0	-	20458616	20458616	8553170	3	86,91,205,	0,589,771,
#Deleted in new
chr14	20460260	20460893	chr14:20460260-20460893	0	-	20460260	20460747	789624	2	38,239,	0,394,
#Partially deleted in new
chr14	20468953	20474571	chr14:20468953-20474571	0	+	20469524	20474571	789624	4	78,209,170,100,	0,373,3354,5518,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	20469378	20477094	chr14:20469378-20477094	3	+	20469524	20476601	0	6	157,170,104,176,191,711,	0,2929,5093,5394,5683,7005,
#Partially deleted in new
chr14	20469405	20473200	chr14:20469405-20473200	0	+	20469405	20469405	8553170	2	130,893,	0,2902,
#Partially deleted in new
chr14	20469405	20475163	chr14:20469405-20475163	0	+	20469405	20469405	8553170	3	130,170,692,	0,2902,5066,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	20469413	20477058	chr14:20469413-20477058	0	+	20469413	20469413	8553170	5	122,170,477,191,675,	0,2894,5058,5648,6970,
#Partially deleted in new
chr14	20469540	20475146	chr14:20469540-20475146	0	+	20469647	20475146	789624	5	235,170,104,176,85,	0,2767,4931,5232,5521,
#Partially deleted in new
chr14	20470525	20474908	chr14:20470525-20474908	0	+	20474527	20474908	789624	4	144,170,104,136,	0,1782,3946,4247,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	20473383	20477087	chr14:20473383-20477087	0	+	20473383	20473383	8553170	2	1869,704,	0,3000,
#Partially deleted in new
chr14	20474788	20477089	chr14:20474788-20477089	3	-	20474788	20474788	8553170	2	306,186,	0,2115,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	20505536	20511155	chr14:20505536-20511155	1	+	20505940	20511122	789624	2	483,689,	0,4930,
#Deleted in new
chr14	20510452	20511169	chr14:20510452-20511169	3	+	20510471	20511122	789624	1	717,	0,
#Deleted in new
chr14	20524286	20525422	chr14:20524286-20525422	7	-	20524286	20524286	16724991	1	1136,	0,
#Deleted in new
chr14	20528114	20528959	chr14:20528114-20528959	7	-	20528114	20528114	16724991	1	845,	0,
#Deleted in new
chr14	20556092	20560931	chr14:20556092-20560931	1	-	20556451	20557069	789624	2	991,58,	0,4781,
#Deleted in new
chr14	20556092	20560931	chr14:20556092-20560931	1	-	20556451	20558540	789624	5	991,111,52,35,58,	0,2447,3489,4244,4781,
#Deleted in new
chr14	20556092	20560931	chr14:20556092-20560931	1	-	20556451	20557069	789624	3	991,35,58,	0,4244,4781,
#Deleted in new
chr14	20556092	20560931	chr14:20556092-20560931	1	-	20556451	20557069	789624	4	991,52,35,58,	0,3489,4244,4781,
#Deleted in new
chr14	20556092	20560931	chr14:20556092-20560931	1	-	20556451	20558615	789624	5	991,36,52,35,58,	0,2522,3489,4244,4781,
#Deleted in new
chr14	20556092	20560931	chr14:20556092-20560931	1	-	20556451	20557069	789624	3	991,52,58,	0,3489,4781,
#Deleted in new
chr14	20556092	20560931	chr14:20556092-20560931	1	-	20556451	20557069	789624	3	2558,52,58,	0,3489,4781,
#Deleted in new
chr14	20556092	20560931	chr14:20556092-20560931	1	-	20556451	20558540	789624	4	991,111,52,58,	0,2447,3489,4781,
#Deleted in new
chr14	20556092	20560931	chr14:20556092-20560931	3	-	20556451	20557069	789624	4	2558,52,35,58,	0,3489,4244,4781,
#Deleted in new
chr14	20556092	20560931	chr14:20556092-20560931	1	-	20556451	20558615	789624	4	991,36,52,58,	0,2522,3489,4781,
#Deleted in new
chr14	20556093	20558657	chr14:20556093-20558657	1	-	20556451	20558540	789624	2	990,118,	0,2446,
#Partially deleted in new
chr14	20582891	20590537	chr14:20582891-20590537	0	-	20590279	20590537	789624	3	1605,63,378,	0,4671,7268,
#Partially deleted in new
chr14	20583558	20587725	chr14:20583558-20587725	1	-	20583874	20584474	789624	2	938,163,	0,4004,
#Partially deleted in new
chr14	20583695	20588034	chr14:20583695-20588034	3	-	20583874	20584474	789624	4	801,104,63,66,	0,1331,3867,4273,
#Partially deleted in new
chr14	20583695	20587990	chr14:20583695-20587990	1	-	20583874	20584474	789624	3	801,63,22,	0,3867,4273,
#Partially deleted in new
chr14	20583696	20587988	chr14:20583696-20587988	1	-	20583874	20584474	789624	3	800,63,20,	0,3866,4272,
#Partially deleted in new
chr14	20583790	20587980	chr14:20583790-20587980	1	-	20583874	20584474	789624	3	706,63,103,	0,3772,4087,
#Partially deleted in new
chr14	20583874	20588003	chr14:20583874-20588003	1	-	20583874	20584474	789624	3	622,63,261,	0,3688,3868,
#Partially deleted in new
chr14	20583938	20587997	chr14:20583938-20587997	0	-	20583938	20584474	789624	3	558,63,229,	0,3624,3830,
#Partially deleted in new
chr14	20583938	20588028	chr14:20583938-20588028	0	-	20583938	20584474	789624	3	558,63,60,	0,3624,4030,
#Partially deleted in new
chr14	20583959	20587962	chr14:20583959-20587962	0	-	20583959	20584474	789624	3	537,63,103,	0,3603,3900,
#Partially deleted in new
chr14	20584046	20609884	chr14:20584046-20609884	0	-	20584046	20584474	789624	2	450,341,	0,25497,
#Partially deleted in new
chr14	20584065	20588047	chr14:20584065-20588047	0	-	20584065	20584474	789624	3	431,63,33,	0,3497,3949,
#Partially deleted in new
chr14	20584339	20609795	chr14:20584339-20609795	3	-	20584339	20590723	789624	3	157,169,252,	0,6253,25204,
#Partially deleted in new
chr14	20587643	20590258	chr14:20587643-20590258	0	+	20587643	20587643	8553170	2	718,75,	0,2540,
#Partially deleted in new
chr14	20587684	20596791	chr14:20587684-20596791	1	+	20587684	20587684	8553170	3	165,292,116,	0,2752,8991,
#Deleted in new
chr14	20590192	20590823	chr14:20590192-20590823	3	-	20590279	20590723	789624	1	631,	0,
#Deleted in new
chr14	20616643	20616991	chr14:20616643-20616991	7	-	20616643	20616643	16724991	1	348,	0,
#Deleted in new
chr14	20640695	20641691	chr14:20640695-20641691	3	-	20640695	20641691	789624	1	996,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	20679410	20679512	chr14:20679410-20679512	3	+	20679410	20679410	8553170	1	102,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	20684099	20701215	chr14:20684099-20701215	3	+	20699371	20699815	0	2	659,1861,	0,15255,
#Partially deleted in new
chr14	20684176	20694186	chr14:20684176-20694186	3	+	20693564	20694008	0	2	582,640,	0,9370,
#Partially deleted in new
chr14	20684582	20700093	chr14:20684582-20700093	1	+	20699371	20699815	0	2	114,739,	0,14772,
#Partially deleted in new
chr14	20684586	20700576	chr14:20684586-20700576	3	+	20693564	20699364	789624	3	172,104,1222,	0,8960,14768,
#Partially deleted in new
chr14	20684613	20698971	chr14:20684613-20698971	0	+	20684613	20684613	8553170	2	145,106,	0,14252,
#Partially deleted in new
chr14	20688772	20694186	chr14:20688772-20694186	1	+	20693564	20694008	0	2	102,640,	0,4774,
#Partially deleted in new
chr14	20688781	20700602	chr14:20688781-20700602	1	+	20699371	20699815	0	2	93,1248,	0,10573,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	20693479	20707120	chr14:20693479-20707120	3	-	20693479	20693479	8553170	4	270,94,177,374,	0,5556,5842,13267,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	20720741	20723127	chr14:20720741-20723127	7	-	20720741	20720741	16724991	2	288,1816,	0,570,
#Partially deleted in new
chr14	20734577	20735011	chr14:20734577-20735011	7	+	20734577	20734577	16724991	1	434,	0,
#Partially deleted in new
chr14	20745891	20748380	chr14:20745891-20748380	3	+	20747580	20748024	789624	2	101,826,	0,1663,
#Partially deleted in new
chr14	20768426	20770948	chr14:20768426-20770948	3	+	20770150	20770594	789624	2	80,816,	0,1706,
#Deleted in new
chr14	20781050	20782467	chr14:20781050-20782467	3	+	20781699	20782152	0	2	288,773,	0,644,
#Deleted in new
chr14	20783887	20784293	chr14:20783887-20784293	3	+	20783887	20783887	8553170	2	145,149,	0,257,
#Deleted in new
chr14	20801227	20803278	chr14:20801227-20803278	3	-	20801597	20802068	0	2	866,482,	0,1569,
#Deleted in new
chr14	20801345	20802855	chr14:20801345-20802855	1	-	20801597	20802068	0	3	748,71,59,	0,903,1451,
#Deleted in new
chr14	20801355	20802406	chr14:20801355-20802406	1	-	20801597	20802068	0	2	738,158,	0,893,
#Deleted in new
chr14	20801393	20802848	chr14:20801393-20802848	1	-	20801597	20801948	789624	2	603,52,	0,1403,
#Deleted in new
chr14	20801459	20802848	chr14:20801459-20802848	1	-	20801597	20802068	0	3	634,83,52,	0,789,1337,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	20870277	20873370	chr14:20870277-20873370	3	-	20870277	20870277	8553170	3	179,190,180,	0,2094,2913,
#Partially deleted in new
chr14	20870278	20873592	chr14:20870278-20873592	0	-	20870278	20870278	8553170	2	178,34,	0,3280,
#Deleted in new
chr14	20874304	20875768	chr14:20874304-20875768	3	-	20874304	20874304	8553170	2	532,232,	0,1232,
#Deleted in new
chr14	20891398	20892348	chr14:20891398-20892348	3	+	20891686	20892169	0	2	53,667,	0,283,
#Partially deleted in new
chr14	20897984	20936255	chr14:20897984-20936255	3	-	20897984	20897984	8553170	2	197,154,	0,38117,
#Partially deleted in new
chr14	20916765	20928580	chr14:20916765-20928580	3	-	20916765	20916765	8553170	2	105,344,	0,11471,
#Deleted in new
chr14	20919360	20920299	chr14:20919360-20920299	3	+	20919360	20919360	8553170	2	44,293,	0,646,
#Partially deleted in new
chr14	20955451	20956436	chr14:20955451-20956436	3	+	20955771	20956257	0	2	85,670,	0,315,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	20963578	20963867	chr14:20963578-20963867	3	+	20963578	20963578	8553170	1	289,	0,
#Deleted in new
chr14	20983154	20985066	chr14:20983154-20985066	7	-	20983154	20983154	16724991	2	411,167,	0,1745,
#Partially deleted in new
chr14	20989769	20997035	chr14:20989769-20997035	3	+	20990002	20996890	789624	14	308,154,135,82,82,74,95,71,108,69,51,84,185,251,	0,460,694,2354,2771,3348,4199,4773,5024,5395,6131,6439,6757,7015,
#Partially deleted in new
chr14	20989972	20992193	chr14:20989972-20992193	0	+	20989972	20989972	8553170	3	105,369,102,	0,257,2119,
#Partially deleted in new
chr14	20989979	20997009	chr14:20989979-20997009	1	+	20990002	20996883	789624	13	98,154,135,82,82,74,95,71,108,69,51,84,483,	0,250,484,2144,2561,3138,3989,4563,4814,5185,5921,6229,6547,
#Partially deleted in new
chr14	20989979	20993116	chr14:20989979-20993116	0	+	20989979	20989979	8553170	5	98,154,135,114,576,	0,250,484,2112,2561,
#Partially deleted in new
chr14	20989979	20992667	chr14:20989979-20992667	0	+	20989979	20989979	8553170	5	98,154,135,82,127,	0,250,484,2144,2561,
#Partially deleted in new
chr14	20989979	20992276	chr14:20989979-20992276	0	+	20989979	20989979	8553170	4	98,154,135,185,	0,250,484,2112,
#Partially deleted in new
chr14	20989986	20997030	chr14:20989986-20997030	1	+	20990002	20996890	789624	14	91,154,135,82,82,74,95,71,108,69,51,84,185,219,	0,243,477,2137,2554,3131,3982,4556,4807,5178,5914,6222,6540,6825,
#Partially deleted in new
chr14	20989993	20997010	chr14:20989993-20997010	0	+	20990002	20992204	789624	13	84,154,135,114,82,74,95,71,108,69,51,84,484,	0,236,470,2098,2547,3124,3975,4549,4800,5171,5907,6215,6533,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	20989993	20996995	chr14:20989993-20996995	0	+	20990002	20992204	789624	10	84,154,135,114,82,946,71,440,392,469,	0,236,470,2098,2547,3124,4549,4800,5907,6533,
#Partially deleted in new
chr14	20989995	20992304	chr14:20989995-20992304	0	+	20989995	20989995	8553170	4	82,154,135,181,	0,234,468,2128,
#Deleted in new
chr14	20989998	20990732	chr14:20989998-20990732	0	+	20989998	20989998	8553170	2	79,503,	0,231,
#Partially deleted in new
chr14	20990001	20994033	chr14:20990001-20994033	0	+	20990480	20994033	789624	5	597,82,82,74,65,	0,2122,2539,3116,3967,
#Partially deleted in new
chr14	20990002	20997016	chr14:20990002-20997016	0	+	20990002	20992204	789624	14	75,154,135,114,82,74,95,71,108,69,51,84,185,232,	0,227,461,2089,2538,3115,3966,4540,4791,5162,5898,6206,6524,6782,
#Partially deleted in new
chr14	20990029	20993141	chr14:20990029-20993141	0	+	20990480	20993141	789624	5	233,135,82,82,24,	0,434,2094,2511,3088,
#Partially deleted in new
chr14	20990031	20992204	chr14:20990031-20992204	0	+	20990040	20992204	789624	3	352,135,81,	0,432,2092,
#Partially deleted in new
chr14	20990035	20993257	chr14:20990035-20993257	0	+	20990035	20990035	8553170	6	42,154,135,82,82,140,	0,194,428,2088,2505,3082,
#Partially deleted in new
chr14	20990042	20992958	chr14:20990042-20992958	0	+	20990042	20990042	8553170	5	35,154,135,82,418,	0,187,421,2081,2498,
#Partially deleted in new
chr14	20990047	20994613	chr14:20990047-20994613	0	+	20990480	20994613	789624	7	30,369,82,82,74,95,71,	0,182,2076,2493,3070,3921,4495,
#Partially deleted in new
chr14	20990546	20995205	chr14:20990546-20995205	0	+	20990546	20990546	8553170	7	52,82,82,74,95,71,412,	0,1577,1994,2571,3422,3996,4247,
#Partially deleted in new
chr14	20990568	20993442	chr14:20990568-20993442	0	+	20990568	20990568	8553170	4	30,114,82,325,	0,1523,1972,2549,
#Partially deleted in new
chr14	20990575	20997028	chr14:20990575-20997028	0	+	20990575	20990575	8553170	3	23,82,144,	0,1548,6309,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	20991752	20993312	chr14:20991752-20993312	0	+	20991752	20991752	8553170	3	453,82,195,	0,788,1365,
#Deleted in new
chr14	20994847	20997030	chr14:20994847-20997030	0	+	20994847	20994847	8553170	5	386,51,84,185,246,	0,1053,1361,1679,1937,
#Deleted in new
chr14	20995116	20997005	chr14:20995116-20997005	0	+	20995116	20995116	8553170	4	117,392,185,221,	0,784,1410,1668,
#Partially deleted in new
chr14	20995836	20999163	chr14:20995836-20999163	1	-	20995836	20995836	789624	4	494,379,135,390,	0,995,1843,2937,
#Deleted in new
chr14	20995929	20997030	chr14:20995929-20997030	0	+	20995929	20996890	789624	4	22,84,185,219,	0,279,597,882,
#Partially deleted in new
chr14	20995943	21014822	chr14:20995943-21014822	3	-	20995943	20995943	8553170	5	387,379,135,141,397,	0,888,1736,3746,18482,
#Partially deleted in new
chr14	20999254	21001721	chr14:20999254-21001721	1	+	20999446	21000132	789624	4	307,131,46,775,	0,487,866,1692,
#Partially deleted in new
chr14	20999289	21001871	chr14:20999289-21001871	3	+	20999446	21001579	789624	4	272,131,51,925,	0,452,826,1657,
#Deleted in new
chr14	20999290	21000033	chr14:20999290-21000033	0	+	20999290	20999290	8553170	2	271,292,	0,451,
#Partially deleted in new
chr14	21016762	21025776	chr14:21016762-21025776	3	-	21017595	21023315	0	17	1000,52,36,48,52,45,104,57,87,61,63,121,106,42,81,67,100,	0,1224,1441,1694,2000,2353,2876,3157,3733,4021,5054,5299,5629,6101,6478,7267,8914,
#Partially deleted in new
chr14	21016762	21025823	chr14:21016762-21025823	1	-	21017595	21023315	0	16	1000,52,36,48,52,45,104,57,87,61,63,121,106,81,67,147,	0,1224,1441,1694,2000,2353,2876,3157,3733,4021,5054,5299,5629,6478,7267,8914,
#Partially deleted in new
chr14	21016763	21025776	chr14:21016763-21025776	1	-	21017595	21023315	0	16	999,52,36,48,52,45,104,57,87,61,63,121,106,42,81,100,	0,1223,1440,1693,1999,2352,2875,3156,3732,4020,5053,5298,5628,6100,6477,8913,
#Partially deleted in new
chr14	21016771	21025819	chr14:21016771-21025819	1	-	21017595	21023315	0	15	991,52,36,48,52,45,104,57,87,61,63,121,106,81,143,	0,1215,1432,1685,1991,2344,2867,3148,3724,4012,5045,5290,5620,6469,8905,
#Partially deleted in new
chr14	21016771	21025094	chr14:21016771-21025094	1	-	21017595	21023315	0	17	991,52,36,48,52,45,104,57,87,61,63,121,106,42,81,67,66,	0,1215,1432,1685,1991,2344,2867,3148,3724,4012,5045,5290,5620,6092,6469,7258,8257,
#Partially deleted in new
chr14	21016771	21025039	chr14:21016771-21025039	1	-	21017595	21023315	0	16	991,52,36,48,52,45,104,57,87,61,63,121,106,81,67,191,	0,1215,1432,1685,1991,2344,2867,3148,3724,4012,5045,5290,5620,6469,7258,8077,
#Partially deleted in new
chr14	21016771	21022820	chr14:21016771-21022820	1	-	21017595	21022144	789624	13	991,52,36,48,52,45,104,57,87,61,63,121,429,	0,1215,1432,1685,1991,2344,2867,3148,3724,4012,5045,5290,5620,
#Partially deleted in new
chr14	21016771	21025026	chr14:21016771-21025026	1	-	21017595	21023315	0	16	991,52,36,48,52,45,104,57,87,61,63,121,106,81,111,201,	0,1215,1432,1685,1991,2344,2867,3148,3724,4012,5045,5290,5620,6469,7214,8054,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	21016771	21020669	chr14:21016771-21020669	0	-	21016771	21016771	8553170	5	991,828,45,104,750,	0,1215,2344,2867,3148,
#Partially deleted in new
chr14	21016771	21022443	chr14:21016771-21022443	0	-	21016878	21022443	789624	6	143,87,61,63,121,52,	0,3724,4012,5045,5290,5620,
#Partially deleted in new
chr14	21016772	21025848	chr14:21016772-21025848	1	-	21017595	21023315	0	16	990,52,36,48,19,45,104,57,87,61,63,121,106,42,81,172,	0,1214,1431,1684,2023,2343,2866,3147,3723,4011,5044,5289,5619,6091,6468,8904,
#Partially deleted in new
chr14	21016772	21025105	chr14:21016772-21025105	1	-	21017595	21023315	0	16	990,52,36,48,52,45,104,57,87,61,63,121,106,42,81,77,	0,1214,1431,1684,1990,2343,2866,3147,3723,4011,5044,5289,5619,6091,6468,8256,
#Partially deleted in new
chr14	21016772	21025105	chr14:21016772-21025105	1	-	21017595	21023315	0	15	990,52,36,48,52,45,104,57,87,61,63,121,106,81,77,	0,1214,1431,1684,1990,2343,2866,3147,3723,4011,5044,5289,5619,6468,8256,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr14	21016772	21024964	chr14:21016772-21024964	1	-	21017595	21023315	0	16	990,52,36,48,52,45,104,57,87,61,63,121,106,42,81,935,	0,1214,1431,1684,1990,2343,2866,3147,3723,4011,5044,5289,5619,6091,6468,7257,
#Partially deleted in new
chr14	21016772	21025061	chr14:21016772-21025061	0	-	21020577	21023315	789624	15	990,52,36,48,52,45,104,57,87,61,63,104,106,81,33,	0,1214,1431,1684,1990,2343,2866,3147,3723,4011,5044,5289,5619,6468,8256,
#Partially deleted in new
chr14	21016810	21023327	chr14:21016810-21023327	1	-	21017595	21023315	0	13	952,52,36,48,52,45,104,57,61,63,121,106,87,	0,1176,1393,1646,1952,2305,2828,3109,3973,5006,5251,5581,6430,
#Deleted in new
chr14	21016837	21018814	chr14:21016837-21018814	0	-	21016837	21016837	8553170	3	925,52,611,	0,1149,1366,
#Partially deleted in new
chr14	21016850	21025645	chr14:21016850-21025645	1	-	21017595	21023315	0	15	912,52,36,52,45,104,57,87,61,63,121,106,81,67,252,	0,1136,1353,1912,2265,2788,3069,3645,3933,4966,5211,5541,6390,7179,8543,
#Partially deleted in new
chr14	21017220	21070872	chr14:21017220-21070872	1	-	21017595	21070851	0	15	542,52,36,48,52,45,104,57,87,61,63,121,106,81,45,	0,766,983,1236,1542,1895,2418,2699,3275,3563,4596,4841,5171,6020,53607,
#Partially deleted in new
chr14	21017449	21025047	chr14:21017449-21025047	1	-	21017595	21023315	789624	18	313,52,36,48,52,45,104,57,87,61,63,121,106,6,57,15,67,19,	0,537,754,1007,1313,1666,2189,2470,3046,3334,4367,4612,4942,5791,5799,5857,6580,7579,
#Partially deleted in new
chr14	21017480	21021122	chr14:21017480-21021122	0	-	21017595	21021122	789624	11	282,52,36,48,52,45,104,57,87,61,154,	0,506,723,976,1282,1635,2158,2439,3015,3303,3488,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	21017746	21020291	chr14:21017746-21020291	0	-	21017746	21017746	8553170	8	16,52,36,48,52,45,104,372,	0,240,457,710,1016,1369,1892,2173,
#Partially deleted in new
chr14	21017991	21025061	chr14:21017991-21025061	0	-	21017991	21023315	789624	15	47,36,48,52,45,104,57,87,61,63,121,106,81,110,33,	0,212,465,771,1124,1647,1928,2504,2792,3825,4070,4400,5249,6038,7037,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	21017994	21020109	chr14:21017994-21020109	0	-	21017994	21017994	8553170	8	44,36,48,37,52,45,104,190,	0,209,462,632,768,1121,1644,1925,
#Partially deleted in new
chr14	21018007	21022182	chr14:21018007-21022182	0	-	21018007	21022182	789624	11	31,36,15,52,45,104,57,87,61,63,121,	0,196,449,755,1108,1631,1912,2488,2776,3809,4054,
#Partially deleted in new
chr14	21018019	21022261	chr14:21018019-21022261	0	-	21018019	21022144	789624	11	19,36,48,52,45,104,57,87,61,63,200,	0,184,437,743,1096,1619,1900,2476,2764,3797,4042,
#Partially deleted in new
chr14	21018456	21025752	chr14:21018456-21025752	0	-	21018456	21023315	789624	13	48,52,45,104,57,87,61,63,121,106,81,111,76,	0,306,659,1182,1463,2039,2327,3360,3605,3935,4784,5529,7220,
#Partially deleted in new
chr14	21018798	21021831	chr14:21018798-21021831	0	-	21018798	21018798	8553170	7	16,45,129,57,87,61,15,	0,317,815,1121,1697,1985,3018,
#Partially deleted in new
chr14	21019120	21025047	chr14:21019120-21025047	0	-	21019120	21023315	789624	12	40,104,57,87,61,63,121,106,42,81,67,19,	0,518,799,1375,1663,2696,2941,3271,3743,4120,4909,5908,
#Partially deleted in new
chr14	21019145	21022497	chr14:21019145-21022497	0	-	21019145	21022497	789624	8	15,104,50,25,61,63,121,106,	0,493,774,1412,1638,2671,2916,3246,
#Partially deleted in new
chr14	21019638	21024060	chr14:21019638-21024060	0	-	21021812	21023315	789624	10	104,57,87,61,133,121,106,42,81,31,	0,281,857,1145,2108,2423,2753,3225,3602,4391,
#Partially deleted in new
chr14	21019638	21023492	chr14:21019638-21023492	0	-	21019638	21023315	789624	8	104,57,87,61,63,121,106,252,	0,281,857,1145,2178,2423,2753,3602,
#Partially deleted in new
chr14	21019647	21025526	chr14:21019647-21025526	0	-	21019647	21023315	789624	10	95,57,87,61,63,121,106,81,67,133,	0,272,848,1136,2169,2414,2744,3593,4382,5746,
#Partially deleted in new
chr14	21019669	21025061	chr14:21019669-21025061	0	-	21019669	21023315	789624	8	73,57,87,61,63,104,81,33,	0,250,826,1114,2147,2392,3571,5359,
#Partially deleted in new
chr14	21019697	21025042	chr14:21019697-21025042	0	-	21019697	21023315	789624	11	45,57,87,61,63,121,106,42,81,67,194,	0,222,798,1086,2119,2364,2694,3166,3543,4332,5151,
#Partially deleted in new
chr14	21019947	21025033	chr14:21019947-21025033	0	-	21019947	21023315	789624	9	29,87,61,63,121,106,42,81,185,	0,548,836,1869,2114,2444,2916,3293,4901,
#Partially deleted in new
chr14	21019966	21023954	chr14:21019966-21023954	0	-	21019966	21023315	789624	8	10,87,61,63,121,106,81,66,	0,529,817,1850,2095,2425,3274,3922,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	21020119	21021087	chr14:21020119-21021087	0	-	21020119	21020119	8553170	3	463,61,48,	0,664,920,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	21020263	21024078	chr14:21020263-21024078	0	-	21020263	21020263	8553170	8	319,61,63,121,106,42,81,49,	0,520,1553,1798,2128,2600,2977,3766,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	21020291	21022233	chr14:21020291-21022233	0	-	21020291	21020291	8553170	4	291,61,63,172,	0,492,1525,1770,
#Deleted in new
chr14	21020362	21021041	chr14:21020362-21021041	0	-	21020362	21020362	8553170	2	482,73,	0,606,
#Deleted in new
chr14	21020447	21021251	chr14:21020447-21021251	0	-	21020447	21020447	8553170	2	135,468,	0,336,
#Partially deleted in new
chr14	21020464	21025061	chr14:21020464-21025061	0	-	21020464	21020464	8553170	7	118,61,63,121,106,81,33,	0,319,1352,1597,1927,2776,4564,
#Partially deleted in new
chr14	21020506	21025490	chr14:21020506-21025490	0	-	21020506	21023315	789624	8	76,61,63,121,106,81,111,20,	0,277,1310,1555,1885,2734,3479,4964,
#Partially deleted in new
chr14	21020528	21025033	chr14:21020528-21025033	0	-	21020528	21023315	789624	7	54,61,63,121,106,81,185,	0,255,1288,1533,1863,2712,4320,
#Deleted in new
chr14	21020532	21023740	chr14:21020532-21023740	0	-	21020532	21023315	789624	7	50,61,63,121,106,42,500,	0,251,1284,1529,1859,2331,2708,
#Partially deleted in new
chr14	21020548	21025139	chr14:21020548-21025139	0	-	21020548	21023315	789624	8	34,61,63,121,106,81,67,76,	0,235,1268,1513,1843,2692,3481,4515,
#Deleted in new
chr14	21020548	21024285	chr14:21020548-21024285	0	-	21020548	21023315	789624	8	34,61,63,121,106,81,67,50,	0,235,1268,1513,1843,2692,3481,3687,
#Partially deleted in new
chr14	21020551	21025529	chr14:21020551-21025529	0	-	21021841	21023315	789624	7	31,61,63,121,81,67,136,	0,232,1265,1510,2689,3478,4842,
#Deleted in new
chr14	21020553	21023152	chr14:21020553-21023152	0	-	21020553	21022947	789624	6	29,61,63,121,106,289,	0,230,1263,1508,1838,2310,
#Deleted in new
chr14	21020558	21024285	chr14:21020558-21024285	0	-	21020558	21023315	789624	8	24,61,63,121,106,81,67,70,	0,225,1258,1503,1833,2682,3471,3657,
#Partially deleted in new
chr14	21020560	21025140	chr14:21020560-21025140	0	-	21020560	21023315	789624	8	22,61,63,121,106,81,67,112,	0,223,1256,1501,1831,2680,3469,4468,
#Partially deleted in new
chr14	21020575	21025289	chr14:21020575-21025289	0	-	21020575	21023315	789624	8	7,61,63,121,106,81,67,97,	0,208,1241,1486,1816,2665,3454,4617,
#Partially deleted in new
chr14	21020783	21025094	chr14:21020783-21025094	0	-	21020783	21023315	789624	7	61,63,121,106,81,111,66,	0,1033,1278,1608,2457,3202,4245,
#Partially deleted in new
chr14	21020797	21025093	chr14:21020797-21025093	0	-	21021812	21023315	789624	6	47,133,121,106,81,65,	0,949,1264,1594,2443,4231,
#Deleted in new
chr14	21020803	21024096	chr14:21020803-21024096	0	-	21020803	21023315	789624	7	41,63,121,106,42,81,111,	0,1013,1258,1588,2060,2437,3182,
#Deleted in new
chr14	21020807	21024285	chr14:21020807-21024285	0	-	21020807	21023315	789624	8	37,63,121,106,42,81,67,70,	0,1009,1254,1584,2056,2433,3222,3408,
#Partially deleted in new
chr14	21020808	21025061	chr14:21020808-21025061	0	-	21020808	21023315	789624	7	36,63,121,106,81,121,33,	0,1008,1253,1583,2432,3167,4220,
#Partially deleted in new
chr14	21020826	21025014	chr14:21020826-21025014	0	-	21020826	21023315	789624	6	18,63,121,106,81,189,	0,990,1235,1565,2414,3999,
#Partially deleted in new
chr14	21020826	21025081	chr14:21020826-21025081	0	-	21021812	21023315	789624	7	18,133,121,106,81,67,53,	0,920,1235,1565,2414,3203,4202,
#Partially deleted in new
chr14	21020828	21025532	chr14:21020828-21025532	0	-	21020828	21023315	789624	8	16,63,121,106,42,81,67,139,	0,988,1233,1563,2035,2412,3201,4565,
#Partially deleted in new
chr14	21020828	21025021	chr14:21020828-21025021	0	-	21020828	21023315	789624	6	16,63,121,106,81,184,	0,988,1233,1563,2412,4009,
#Partially deleted in new
chr14	21020829	21025072	chr14:21020829-21025072	0	-	21020829	21023315	789624	8	15,63,121,106,42,81,111,44,	0,987,1232,1562,2034,2411,3156,4199,
#Deleted in new
chr14	21021416	21022343	chr14:21021416-21022343	0	-	21021416	21021416	8553170	2	463,282,	0,645,
#Partially deleted in new
chr14	21021586	21025732	chr14:21021586-21025732	0	-	21021586	21021586	8553170	5	293,121,106,81,56,	0,475,805,1654,4090,
#Deleted in new
chr14	21021675	21024031	chr14:21021675-21024031	0	-	21021675	21021675	8553170	5	204,121,106,81,46,	0,386,716,1565,2310,
#Partially deleted in new
chr14	21021711	21025061	chr14:21021711-21025061	0	-	21021711	21021711	8553170	6	168,121,106,81,67,33,	0,350,680,1529,2318,3317,
#Partially deleted in new
chr14	21021754	21025068	chr14:21021754-21025068	0	-	21021754	21021754	8553170	6	125,121,106,42,81,40,	0,307,637,1109,1486,3274,
#Deleted in new
chr14	21021821	21024295	chr14:21021821-21024295	0	-	21021821	21023315	789624	5	58,121,106,81,266,	0,240,570,1419,2208,
#Partially deleted in new
chr14	21021836	21025755	chr14:21021836-21025755	0	-	21021836	21023315	789624	7	43,121,106,42,81,111,79,	0,225,555,1027,1404,2149,3840,
#Deleted in new
chr14	21021840	21023522	chr14:21021840-21023522	0	-	21021840	21023315	789624	4	39,104,106,282,	0,221,551,1400,
#Partially deleted in new
chr14	21021856	21025000	chr14:21021856-21025000	0	-	21021856	21023315	789624	6	23,121,106,81,67,175,	0,205,535,1384,2173,2969,
#Partially deleted in new
chr14	21021869	21024715	chr14:21021869-21024715	0	-	21021869	21023315	789624	7	10,121,106,42,81,67,153,	0,192,522,994,1371,2160,2693,
#Partially deleted in new
chr14	21022087	21025033	chr14:21022087-21025033	0	-	21022087	21023315	789624	5	95,106,81,111,185,	0,304,1153,1898,2761,
#Partially deleted in new
chr14	21022108	21025026	chr14:21022108-21025026	0	-	21022108	21023315	789624	6	74,106,42,81,67,201,	0,283,755,1132,1921,2717,
#Partially deleted in new
chr14	21022146	21025692	chr14:21022146-21025692	0	-	21022146	21023315	789624	6	36,106,42,81,67,222,	0,245,717,1094,1883,3324,
#Deleted in new
chr14	21022879	21024284	chr14:21022879-21024284	0	-	21022879	21022879	8553170	3	442,67,49,	0,1150,1356,
#Deleted in new
chr14	21023313	21023386	chr14:21023313-21023386	3	-	21023313	21023313	5263520	1	73,	0,
#Partially deleted in new
chr14	21024108	21031008	chr14:21024108-21031008	0	+	21024108	21024108	8553170	2	236,496,	0,6404,
#Partially deleted in new
chr14	21024171	21029245	chr14:21024171-21029245	0	+	21024171	21024171	8553170	2	173,305,	0,4769,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	21024295	21029271	chr14:21024295-21029271	3	+	21024295	21024295	8553170	3	49,89,331,	0,4150,4645,
#Partially deleted in new
chr14	21030185	21032815	chr14:21030185-21032815	0	+	21030185	21030185	8553170	3	119,653,924,	0,327,1706,
#Deleted in new
chr14	21030222	21030964	chr14:21030222-21030964	0	+	21030222	21030222	8553170	2	123,452,	0,290,
#Partially deleted in new
chr14	21030225	21032168	chr14:21030225-21032168	3	+	21030581	21032077	789624	4	79,242,154,277,	0,287,786,1666,
#Deleted in new
chr14	21030249	21031282	chr14:21030249-21031282	1	+	21030581	21031252	789624	3	55,242,271,	0,263,762,
#Deleted in new
chr14	21030249	21031008	chr14:21030249-21031008	0	+	21030249	21030249	8553170	2	68,496,	0,263,
#Partially deleted in new
chr14	21030270	21036274	chr14:21030270-21036274	0	+	21030581	21036274	789624	4	34,242,154,84,	0,242,741,5920,
#Partially deleted in new
chr14	21030270	21032151	chr14:21030270-21032151	1	+	21030581	21032077	789624	4	47,242,154,260,	0,242,741,1621,
#Partially deleted in new
chr14	21030596	21036274	chr14:21030596-21036274	0	+	21030596	21032367	789624	4	158,154,61,84,	0,415,1723,5594,
#Partially deleted in new
chr14	21030602	21036274	chr14:21030602-21036274	0	+	21030602	21030602	8553170	2	563,84,	0,5588,
#Partially deleted in new
chr14	21030606	21036276	chr14:21030606-21036276	0	+	21030606	21035823	789624	4	148,154,299,86,	0,405,5187,5584,
#Partially deleted in new
chr14	21031022	21036077	chr14:21031022-21036077	0	+	21031022	21032367	789624	3	143,61,284,	0,1297,4771,
#Deleted in new
chr14	21032817	21033895	chr14:21032817-21033895	3	+	21032817	21032817	8553170	2	337,155,	0,923,
#Deleted in new
chr14	21032819	21034785	chr14:21032819-21034785	3	-	21033817	21034288	789624	2	1477,130,	0,1836,
#Deleted in new
chr14	21042225	21044233	chr14:21042225-21044233	3	+	21042992	21043463	0	2	217,1281,	0,727,
#Deleted in new
chr14	21042315	21044234	chr14:21042315-21044234	0	+	21042992	21043463	0	3	127,660,135,	0,637,1784,
#Deleted in new
chr14	21057821	21058455	chr14:21057821-21058455	3	+	21057892	21058357	789624	1	634,	0,
#Partially deleted in new
chr14	21070269	21090240	chr14:21070269-21090240	3	+	21070396	21088871	789624	24	130,198,1249,168,121,97,81,117,96,116,127,123,144,611,235,87,216,171,178,105,144,131,47,1227,	0,2775,3662,5062,5375,6090,6293,6504,7907,8103,8614,10390,10603,11239,11974,12561,13565,14483,15419,16731,17050,17698,18560,18744,
#Deleted in new
chr14	21070272	21075553	chr14:21070272-21075553	0	+	21070396	21075553	789624	4	127,198,1249,222,	0,2772,3659,5059,
#Partially deleted in new
chr14	21070290	21089555	chr14:21070290-21089555	0	+	21070396	21075702	789624	23	109,198,1060,168,143,97,81,117,96,116,127,123,144,611,235,87,216,171,178,105,131,47,542,	0,2754,3641,5041,5332,6069,6272,6483,7886,8082,8593,10369,10582,11218,11953,12540,13544,14462,15398,16710,17677,18539,18723,
#Partially deleted in new
chr14	21070316	21089545	chr14:21070316-21089545	0	+	21070396	21076562	789624	24	83,198,1249,168,121,97,108,117,96,116,127,123,144,611,235,87,216,171,178,105,144,131,47,532,	0,2728,3615,5015,5328,6043,6219,6457,7860,8056,8567,10343,10556,11192,11927,12514,13518,14436,15372,16684,17003,17651,18513,18697,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	21070367	21086906	chr14:21070367-21086906	0	+	21070367	21070367	8553170	14	32,134,97,81,117,31,113,123,1247,235,87,216,171,1218,	0,2677,5992,6195,6406,7809,8530,10292,10505,11876,12463,13467,14385,15321,
#Deleted in new
chr14	21074776	21076456	chr14:21074776-21076456	0	+	21074776	21074776	8553170	3	404,434,97,	0,555,1583,
#Partially deleted in new
chr14	21080896	21089545	chr14:21080896-21089545	0	+	21080896	21080896	8553170	10	120,611,235,87,216,171,178,463,131,716,	0,612,1347,1934,2938,3856,4792,6104,7071,7933,
#Partially deleted in new
chr14	21087752	21089414	chr14:21087752-21089414	0	+	21087752	21087752	8553170	3	346,47,401,	0,1077,1261,
#Deleted in new
chr14	21090045	21098640	chr14:21090045-21098640	1	-	21090535	21093591	789624	5	1095,132,1426,89,329,	0,1365,1819,3540,8266,
#Partially deleted in new
chr14	21090081	21104722	chr14:21090081-21104722	3	-	21090535	21093591	789624	5	1059,132,1426,89,212,	0,1329,1783,3504,14429,
#Deleted in new
chr14	21090083	21099014	chr14:21090083-21099014	1	-	21090535	21093591	789624	5	1057,132,1426,89,204,	0,1327,1781,3502,8727,
#Deleted in new
chr14	21092662	21094500	chr14:21092662-21094500	0	-	21092662	21093591	789624	3	628,89,81,	0,923,1757,
#Deleted in new
chr14	21092960	21098922	chr14:21092960-21098922	0	-	21092960	21098851	789624	3	344,89,112,	0,625,5850,
#Deleted in new
chr14	21092963	21098855	chr14:21092963-21098855	0	-	21092963	21093591	789624	4	327,89,85,45,	0,622,4364,5847,
#Deleted in new
chr14	21092971	21094535	chr14:21092971-21094535	0	-	21092971	21094404	789624	3	333,89,145,	0,614,1419,
#Deleted in new
chr14	21092973	21093828	chr14:21092973-21093828	0	-	21092973	21093591	789624	2	317,243,	0,612,
#Deleted in new
chr14	21093002	21098945	chr14:21093002-21098945	0	-	21093002	21093173	789624	4	288,64,89,135,	0,426,583,5808,
#Deleted in new
chr14	21093166	21098911	chr14:21093166-21098911	0	-	21093166	21093166	8553170	2	508,101,	0,5644,
#Partially deleted in new
chr14	21093202	21103579	chr14:21093202-21103579	0	-	21093202	21093591	789624	3	88,89,477,	0,383,9900,
#Deleted in new
chr14	21093257	21094448	chr14:21093257-21094448	0	-	21093257	21093257	8553170	2	417,58,	0,1133,
#Partially deleted in new
chr14	21098936	21103724	chr14:21098936-21103724	3	+	21101343	21103258	789624	8	262,108,144,111,57,111,147,586,	0,2140,2371,2928,3127,3468,3696,4202,
#Partially deleted in new
chr14	21098937	21102737	chr14:21098937-21102737	0	+	21101343	21102737	789624	6	261,108,144,57,111,105,	0,2139,2370,3126,3467,3695,
#Deleted in new
chr14	21101078	21101797	chr14:21101078-21101797	0	+	21101078	21101078	8553170	2	106,485,	0,234,
#Deleted in new
chr14	21101102	21103722	chr14:21101102-21103722	1	+	21101343	21103258	789624	7	82,144,111,57,111,147,584,	0,205,762,961,1302,1530,2036,
#Deleted in new
chr14	21101597	21102691	chr14:21101597-21102691	0	+	21101597	21101597	8553170	4	378,57,111,59,	0,466,807,1035,
#Deleted in new
chr14	21101703	21104216	chr14:21101703-21104216	0	-	21101703	21101703	8553170	1	2513,	0,
#Deleted in new
chr14	21102382	21102694	chr14:21102382-21102694	0	+	21102382	21102382	8553170	2	133,62,	0,250,
#Partially deleted in new
chr14	21108042	21116703	chr14:21108042-21116703	3	+	21108042	21108042	8553170	2	117,241,	0,8420,
#Partially deleted in new
chr14	21110294	21113472	chr14:21110294-21113472	7	-	21110294	21110294	16724991	3	1025,207,817,	0,1675,2361,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	21113638	21113745	chr14:21113638-21113745	3	-	21113638	21113638	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	21148369	21159060	chr14:21148369-21159060	1	-	21154936	21155872	789624	2	7517,715,	0,9976,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	21148369	21159060	chr14:21148369-21159060	3	-	21154936	21155872	789624	2	7517,238,	0,10453,
#Deleted in new
chr14	21154864	21156063	chr14:21154864-21156063	1	-	21154936	21155872	789624	1	1199,	0,
#Deleted in new
chr14	21154866	21156063	chr14:21154866-21156063	1	-	21154936	21156025	789624	1	1197,	0,
#Deleted in new
chr14	21162512	21163743	chr14:21162512-21163743	7	+	21162512	21162512	16724991	1	1231,	0,
#Deleted in new
chr14	21184340	21184959	chr14:21184340-21184959	7	-	21184340	21184340	16724991	1	619,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	21200078	21205503	chr14:21200078-21205503	0	-	21200078	21200078	789624	1	5425,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	21200460	21206900	chr14:21200460-21206900	3	-	21200460	21200460	789624	2	1473,290,	0,6150,
#Partially deleted in new
chr14	21209135	21269494	chr14:21209135-21269494	1	-	21211336	21234193	789624	7	2431,114,158,48,76,277,197,	0,2674,3824,21183,21861,24817,60162,
#Partially deleted in new
chr14	21210533	21269425	chr14:21210533-21269425	1	-	21211222	21234193	0	10	773,161,114,158,48,76,277,26,163,128,	0,872,1276,2426,19785,20463,23419,52777,53133,58764,
#Partially deleted in new
chr14	21210545	21269423	chr14:21210545-21269423	1	-	21211286	21234193	789624	7	761,114,158,48,115,277,126,	0,1264,2414,19773,20412,23407,58752,
#Partially deleted in new
chr14	21210549	21269425	chr14:21210549-21269425	1	-	21211222	21234193	0	9	757,161,114,158,48,115,277,26,128,	0,856,1260,2410,19769,20408,23403,52761,58748,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	21210555	21265516	chr14:21210555-21265516	1	-	21211222	21234193	0	8	751,161,114,158,48,76,277,2916,	0,850,1254,2404,19763,20441,23397,52045,
#Partially deleted in new
chr14	21210555	21234245	chr14:21210555-21234245	1	-	21211229	21234193	789624	8	680,69,161,114,158,48,76,293,	0,682,850,1254,2404,19763,20441,23397,
#Partially deleted in new
chr14	21210581	21269403	chr14:21210581-21269403	1	-	21211336	21234193	789624	8	985,114,158,48,76,277,26,106,	0,1228,2378,19737,20415,23371,52729,58716,
#Partially deleted in new
chr14	21210612	21269421	chr14:21210612-21269421	3	-	21211222	21234193	789624	9	694,158,114,158,48,115,277,26,124,	0,793,1197,2347,19706,20345,23340,52698,58685,
#Partially deleted in new
chr14	21210612	21269404	chr14:21210612-21269404	1	-	21211222	21234193	789624	9	694,158,114,158,48,76,277,26,107,	0,793,1197,2347,19706,20384,23340,52698,58685,
#Partially deleted in new
chr14	21210903	21269424	chr14:21210903-21269424	0	-	21211920	21234193	789624	8	403,161,114,85,115,277,26,127,	0,502,906,2056,20054,23049,52407,58394,
#Partially deleted in new
chr14	21210922	21269410	chr14:21210922-21269410	1	-	21211222	21234193	0	8	384,161,114,158,48,152,26,113,	0,483,887,2037,19396,23155,52388,58375,
#Partially deleted in new
chr14	21210932	21269400	chr14:21210932-21269400	1	-	21211222	21234193	0	8	374,161,94,49,48,76,277,103,	0,473,877,2136,19386,20064,23020,58365,
#Partially deleted in new
chr14	21210932	21269425	chr14:21210932-21269425	1	-	21211286	21234193	789624	9	374,114,158,48,115,277,26,163,128,	0,877,2027,19386,20025,23020,52378,52734,58365,
#Partially deleted in new
chr14	21210936	21269442	chr14:21210936-21269442	1	-	21211222	21234193	0	9	370,161,114,158,48,76,277,26,145,	0,469,873,2023,19382,20060,23016,52374,58361,
#Partially deleted in new
chr14	21210936	21212002	chr14:21210936-21212002	0	-	21210936	21210936	8553170	3	370,161,193,	0,469,873,
#Partially deleted in new
chr14	21210936	21269425	chr14:21210936-21269425	1	-	21211222	21234193	0	8	370,161,114,158,48,115,277,128,	0,469,873,2023,19382,20021,23016,58361,
#Partially deleted in new
chr14	21210965	21262677	chr14:21210965-21262677	1	-	21211222	21234193	0	8	341,161,114,158,48,76,277,77,	0,440,844,1994,19353,20031,22987,51635,
#Partially deleted in new
chr14	21211105	21269425	chr14:21211105-21269425	1	-	21211222	21234193	0	11	201,161,114,158,48,115,277,168,26,163,128,	0,300,704,1854,19213,19852,22847,51495,52205,52561,58192,
#Partially deleted in new
chr14	21211223	21231422	chr14:21211223-21231422	0	-	21211223	21231368	789624	7	83,161,114,158,48,76,58,	0,182,586,1736,19095,19773,20141,
#Partially deleted in new
chr14	21211255	21269445	chr14:21211255-21269445	0	-	21211255	21231004	789624	9	51,161,114,158,48,31,11,26,148,	0,150,554,1704,19063,19741,22963,52055,58042,
#Partially deleted in new
chr14	21211417	21269442	chr14:21211417-21269442	0	-	21211417	21234193	789624	9	149,114,158,48,76,277,26,46,145,	0,392,1542,18901,19579,22535,51893,57205,57880,
#Partially deleted in new
chr14	21211458	21213419	chr14:21211458-21213419	0	-	21211458	21211458	8553170	3	108,114,460,	0,351,1501,
#Partially deleted in new
chr14	21211489	21230660	chr14:21211489-21230660	0	-	21211489	21211489	8553170	4	77,114,158,342,	0,320,1470,18829,
#Partially deleted in new
chr14	21212960	21269409	chr14:21212960-21269409	0	-	21212960	21234193	789624	7	157,48,115,277,26,46,112,	0,17358,17997,20992,50350,55662,56337,
#Partially deleted in new
chr14	21212996	21269411	chr14:21212996-21269411	0	-	21212996	21234193	789624	7	121,48,115,277,88,26,114,	0,17322,17961,20956,23376,50314,56301,
#Partially deleted in new
chr14	21213104	21269392	chr14:21213104-21269392	0	-	21213104	21234193	789624	8	13,48,76,277,63,26,46,95,	0,17214,17892,20848,21664,50206,55518,56193,
#Partially deleted in new
chr14	21230318	21269411	chr14:21230318-21269411	0	-	21230318	21234193	789624	6	48,76,277,88,26,114,	0,678,3634,6054,32992,38979,
#Partially deleted in new
chr14	21230331	21268651	chr14:21230331-21268651	0	-	21230331	21234193	789624	6	35,76,277,88,26,29,	0,665,3621,6041,32979,38291,
#Partially deleted in new
chr14	21230897	21269423	chr14:21230897-21269423	0	-	21230897	21230897	8553170	4	175,277,26,126,	0,3055,32413,38400,
#Partially deleted in new
chr14	21233994	21269406	chr14:21233994-21269406	0	-	21233994	21234193	789624	5	235,47,26,163,109,	0,20552,29316,29672,35303,
#Partially deleted in new
chr14	21234030	21269425	chr14:21234030-21269425	0	-	21234030	21234193	789624	3	199,272,128,	0,29280,35267,
#Partially deleted in new
chr14	21262602	21269442	chr14:21262602-21269442	0	-	21262602	21262602	8553170	3	96,519,145,	0,708,6695,
#Partially deleted in new
chr14	21262992	21269389	chr14:21262992-21269389	0	-	21262992	21262992	8553170	2	837,92,	0,6305,
#Partially deleted in new
chr14	21287938	21351301	chr14:21287938-21351301	1	+	21287976	21351216	789624	21	123,133,272,97,132,106,24,147,74,155,161,144,151,185,204,139,101,193,85,131,198,	0,6738,13027,14549,15473,19792,22645,23885,24494,29757,32078,33320,33915,39684,40485,42310,46666,55097,57174,60233,63165,
#Partially deleted in new
chr14	21287938	21351301	chr14:21287938-21351301	1	+	21287976	21351216	789624	24	123,133,272,97,132,106,24,147,74,155,161,144,118,453,152,343,185,204,139,101,193,85,131,198,	0,6738,13027,14549,15473,19792,22645,23885,24494,29757,32078,33320,33915,36679,37293,37892,39684,40485,42310,46666,55097,57174,60233,63165,
#Partially deleted in new
chr14	21287976	21351295	chr14:21287976-21351295	3	+	21287976	21351216	0	24	85,133,272,97,213,106,24,147,74,155,161,144,151,453,152,343,185,204,139,101,193,85,131,192,	0,6700,12989,14511,15354,19754,22607,23847,24456,29719,32040,33282,33877,36641,37255,37854,39646,40447,42272,46628,55059,57136,60195,63127,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	21301148	21302969	chr14:21301148-21302969	0	+	21301148	21301148	8553170	2	89,482,	0,1339,
#Partially deleted in new
chr14	21317538	21351301	chr14:21317538-21351301	1	+	21317618	21351216	0	12	312,161,144,151,185,204,139,101,193,85,131,198,	0,2478,3720,4315,10084,10885,12710,17066,25497,27574,30633,33565,
#Partially deleted in new
chr14	21320150	21325867	chr14:21320150-21325867	0	+	21320150	21320150	8553170	6	27,42,151,108,152,105,	0,1108,1703,4467,5081,5612,
#Partially deleted in new
chr14	21321358	21351301	chr14:21321358-21351301	0	+	21321358	21321438	789624	13	148,148,346,152,343,185,204,139,101,193,85,131,198,	0,498,3366,3873,4472,6264,7065,8890,13246,21677,23754,26813,29745,
#Partially deleted in new
chr14	21321363	21351301	chr14:21321363-21351301	0	+	21321363	21351216	789624	13	39,148,453,152,343,185,204,139,101,193,85,131,198,	0,493,3254,3868,4467,6259,7060,8885,13241,21672,23749,26808,29740,
#Partially deleted in new
chr14	21321372	21324898	chr14:21321372-21324898	0	+	21321372	21324898	789624	3	30,118,281,	0,481,3245,
#Partially deleted in new
chr14	21321916	21351301	chr14:21321916-21351301	0	+	21321916	21324693	789624	13	55,157,196,152,343,185,204,139,101,193,85,131,198,	0,2652,2958,3315,3914,5706,6507,8332,12688,21119,23196,26255,29187,
#Partially deleted in new
chr14	21323923	21351298	chr14:21323923-21351298	0	+	21323923	21323923	8553170	11	1147,152,343,185,204,139,101,193,85,131,195,	0,1308,1907,3699,4500,6325,10681,19112,21189,24248,27180,
#Partially deleted in new
chr14	21328598	21343165	chr14:21328598-21343165	0	+	21328598	21343165	789624	4	29,139,104,130,	0,1650,6003,14437,
#Partially deleted in new
chr14	21351471	21384266	chr14:21351471-21384266	3	-	21352672	21383927	0	26	1347,78,130,130,170,76,113,126,119,127,136,128,154,116,96,66,113,74,91,173,152,147,153,171,93,405,	0,2016,2231,2939,5725,6455,6843,8012,8943,9374,9606,10725,11322,11562,11761,11966,13355,13598,14967,16797,17732,18278,18864,20402,21866,32390,
#Partially deleted in new
chr14	21351478	21358402	chr14:21351478-21358402	0	-	21351478	21351478	8553170	6	1340,78,130,130,170,476,	0,2009,2224,2932,5718,6448,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	21353559	21354943	chr14:21353559-21354943	0	-	21353559	21353559	8553170	3	6,130,533,	0,143,851,
#Partially deleted in new
chr14	21369348	21383946	chr14:21369348-21383946	0	-	21371928	21383927	789624	6	7,147,153,97,93,85,	0,401,987,2525,3989,14513,
#Partially deleted in new
chr14	21369435	21384010	chr14:21369435-21384010	0	-	21369435	21369435	8553170	5	461,153,171,93,149,	0,900,2438,3902,14426,
#Partially deleted in new
chr14	21369819	21383995	chr14:21369819-21383995	0	-	21372630	21383927	789624	6	77,153,171,249,93,134,	0,516,2054,2649,3518,14042,
#Partially deleted in new
chr14	21372074	21384013	chr14:21372074-21384013	0	-	21372074	21372074	8553170	3	643,93,152,	0,1263,11787,
#Deleted in new
chr14	21382974	21383981	chr14:21382974-21383981	1	-	21383583	21383927	789624	2	795,120,	0,887,
#Deleted in new
chr14	21384291	21384920	chr14:21384291-21384920	3	+	21384291	21384291	8553170	1	629,	0,
#Partially deleted in new
chr14	21385193	21437245	chr14:21385193-21437245	1	-	21385612	21431816	0	38	983,117,180,114,303,149,720,209,208,55,76,130,104,90,157,200,197,111,180,168,196,211,256,144,177,244,122,138,84,118,56,69,183,115,386,372,48,52,	0,5753,6269,6639,7313,7912,8282,9083,9718,10104,10623,12629,14408,14787,14957,15219,15681,16209,16763,17142,17823,18259,20015,20527,21662,23118,23510,24657,27719,29107,29744,30380,30531,40934,42675,43770,46617,52000,
#Partially deleted in new
chr14	21385194	21431708	chr14:21385194-21431708	1	-	21385612	21431643	0	37	982,117,180,114,303,149,720,209,208,55,76,130,104,90,157,200,197,111,180,168,196,211,256,144,177,244,122,138,84,118,56,69,183,115,386,372,908,	0,5752,6268,6638,7312,7911,8281,9082,9717,10103,10622,12628,14407,14786,14956,15218,15680,16208,16762,17141,17822,18258,20014,20526,21661,23117,23509,24656,27718,29106,29743,30379,30530,40933,42674,43769,45606,
#Partially deleted in new
chr14	21385197	21456126	chr14:21385197-21456126	1	-	21385612	21431643	0	38	979,117,180,114,303,149,720,209,208,55,76,130,104,90,157,200,197,111,180,168,196,211,256,144,177,244,122,138,84,118,56,69,183,115,386,372,1058,95,	0,5749,6265,6635,7309,7908,8278,9079,9714,10100,10619,12625,14404,14783,14953,15215,15677,16205,16759,17138,17819,18255,20011,20523,21658,23114,23506,24653,27715,29103,29740,30376,30527,40930,42671,43766,45603,70834,
#Deleted in new
chr14	21385198	21386344	chr14:21385198-21386344	0	-	21385198	21385198	8553170	1	1146,	0,
#Partially deleted in new
chr14	21385200	21427983	chr14:21385200-21427983	0	-	21385200	21385200	8553170	33	976,117,180,114,303,149,720,209,981,130,104,90,157,200,197,111,180,168,196,211,256,144,177,244,122,138,84,118,56,69,183,115,115,	0,5746,6262,6632,7306,7905,8275,9076,9711,12622,14401,14780,14950,15212,15674,16202,16756,17135,17816,18252,20008,20520,21655,23111,23503,24650,27712,29100,29737,30373,30524,40927,42668,
#Partially deleted in new
chr14	21385200	21456090	chr14:21385200-21456090	3	-	21385612	21431816	0	38	976,117,180,114,303,149,720,209,208,55,76,130,104,90,157,200,197,111,180,168,196,211,256,144,177,244,122,138,84,118,56,69,183,115,386,372,48,59,	0,5746,6262,6632,7306,7905,8275,9076,9711,10097,10616,12622,14401,14780,14950,15212,15674,16202,16756,17135,17816,18252,20008,20520,21655,23111,23503,24650,27712,29100,29737,30373,30524,40927,42668,43763,46610,70831,
#Partially deleted in new
chr14	21385493	21437276	chr14:21385493-21437276	1	-	21385612	21431643	0	38	683,117,180,114,303,149,720,209,208,55,76,130,104,90,157,200,197,111,180,168,196,211,256,144,177,244,122,138,84,118,56,69,183,115,386,372,1058,83,	0,5453,5969,6339,7013,7612,7982,8783,9418,9804,10323,12329,14108,14487,14657,14919,15381,15909,16463,16842,17523,17959,19715,20227,21362,22818,23210,24357,27419,28807,29444,30080,30231,40634,42375,43470,45307,51700,
#Partially deleted in new
chr14	21385494	21437308	chr14:21385494-21437308	1	-	21385612	21431643	0	39	682,117,180,114,303,149,720,209,208,55,76,130,104,90,157,200,197,111,180,168,196,211,256,144,177,244,122,138,84,118,56,69,183,115,386,372,1058,65,115,	0,5452,5968,6338,7012,7611,7981,8782,9417,9803,10322,12328,14107,14486,14656,14918,15380,15908,16462,16841,17522,17958,19714,20226,21361,22817,23209,24356,27418,28806,29443,30079,30230,40633,42374,43469,45306,51406,51699,
#Partially deleted in new
chr14	21385556	21393125	chr14:21385556-21393125	0	-	21385612	21393125	789624	5	620,117,114,303,20,	0,5390,6276,6950,7549,
#Partially deleted in new
chr14	21385600	21409890	chr14:21385600-21409890	0	-	21385612	21409890	789624	28	576,117,180,114,303,149,720,209,208,55,76,130,104,90,181,200,197,111,180,168,196,211,256,144,177,244,122,40,	0,5346,5862,6232,6906,7505,7875,8676,9311,9697,10216,12222,14001,14380,14550,14812,15274,15802,16356,16735,17416,17852,19608,20120,21255,22711,23103,24250,
#Deleted in new
chr14	21392149	21392253	chr14:21392149-21392253	3	-	21392149	21392149	789624	1	104,	0,
#Deleted in new
chr14	21393670	21395014	chr14:21393670-21395014	0	-	21393670	21393670	8553170	2	815,103,	0,1241,
#Partially deleted in new
chr14	21393815	21437245	chr14:21393815-21437245	0	-	21393815	21431816	789624	34	380,209,208,55,76,130,104,90,157,200,197,111,180,168,196,211,256,144,177,244,122,138,84,118,56,69,183,115,386,372,843,48,65,52,	0,461,1096,1482,2001,4007,5786,6165,6335,6597,7059,7587,8141,8520,9201,9637,11393,11905,13040,14496,14888,16035,19097,20485,21122,21758,21909,32312,34053,35148,36985,37995,43085,43378,
#Deleted in new
chr14	21394108	21394767	chr14:21394108-21394767	0	-	21394108	21394108	8553170	2	87,491,	0,168,
#Partially deleted in new
chr14	21394912	21437230	chr14:21394912-21437230	0	-	21400262	21402419	789624	13	207,55,76,130,104,90,157,180,168,26,48,65,37,	0,385,904,2910,4689,5068,5238,7044,7423,8104,36898,41988,42281,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	21396612	21402129	chr14:21396612-21402129	0	-	21396612	21396612	8553170	4	3458,157,659,727,	0,3538,3800,4790,
#Deleted in new
chr14	21397291	21397401	chr14:21397291-21397401	3	-	21397291	21397291	789624	1	110,	0,
#Deleted in new
chr14	21398924	21399282	chr14:21398924-21399282	7	+	21398924	21398924	16724991	1	358,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr14	21404814	21431555	chr14:21404814-21431555	0	-	21405119	21431555	789624	15	650,144,177,244,122,138,84,118,56,69,183,115,386,372,755,	0,906,2041,3497,3889,5036,8098,9486,10123,10759,10910,21313,23054,24149,25986,
#Partially deleted in new
chr14	21408322	21413006	chr14:21408322-21413006	0	-	21408322	21408322	8553170	3	503,138,94,	0,1528,4590,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	21413706	21416606	chr14:21413706-21416606	0	-	21413706	21413706	8553170	2	1936,882,	0,2018,
#Partially deleted in new
chr14	21415871	21437275	chr14:21415871-21437275	0	-	21415871	21431816	789624	7	36,115,386,372,48,65,82,	0,10256,11997,13092,15939,21029,21322,
#Partially deleted in new
chr14	21419619	21419960	chr14:21419619-21419960	7	+	21419619	21419619	16724991	1	341,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	21425323	21437273	chr14:21425323-21437273	0	-	21425323	21425323	8553170	5	919,386,372,1058,80,	0,2545,3640,5477,11870,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	21425692	21437254	chr14:21425692-21437254	0	-	21425692	21425692	8553170	4	2562,2895,65,61,	0,3271,11208,11501,
#Partially deleted in new
chr14	21426172	21437245	chr14:21426172-21437245	0	-	21426172	21431816	789624	6	70,386,372,924,48,52,	0,1696,2791,4628,5638,11021,
#Partially deleted in new
chr14	21429136	21437244	chr14:21429136-21437244	0	-	21429136	21436996	789624	2	199,344,	0,7764,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	21429507	21429806	chr14:21429507-21429806	3	-	21429507	21429507	8553170	1	299,	0,
#Partially deleted in new
chr14	21431114	21437265	chr14:21431114-21437265	0	-	21431114	21431816	789624	4	448,48,65,72,	0,696,5786,6079,
#Partially deleted in new
chr14	21431732	21456126	chr14:21431732-21456126	0	-	21431732	21431732	8553170	3	126,195,95,	0,23216,24299,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	21459019	21476973	chr14:21459019-21476973	3	-	21461195	21476872	0	8	2284,69,112,93,83,68,72,147,	0,3330,4636,9337,9650,15847,17508,17807,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	21459667	21476909	chr14:21459667-21476909	1	-	21460321	21476872	8553170	9	673,65,69,112,93,83,68,72,83,	0,1571,2682,3988,8689,9002,15199,16860,17159,
#Partially deleted in new
chr14	21461197	21476958	chr14:21461197-21476958	0	-	21463764	21476872	789624	6	106,69,112,68,72,132,	0,1152,2458,13669,15330,15629,
#Partially deleted in new
chr14	21461244	21476673	chr14:21461244-21476673	0	-	21461244	21461244	8553170	7	59,69,112,93,83,68,146,	0,1105,2411,7112,7425,13622,15283,
#Partially deleted in new
chr14	21474519	21476960	chr14:21474519-21476960	0	-	21474519	21474519	8553170	3	415,72,134,	0,2008,2307,
#Partially deleted in new
chr14	21476266	21476936	chr14:21476266-21476936	0	-	21476266	21476266	8553170	2	333,110,	0,560,
#Partially deleted in new
chr14	21476596	21488850	chr14:21476596-21488850	0	+	21476654	21488850	789624	4	151,69,243,261,	0,899,10854,11993,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	21476754	21499175	chr14:21476754-21499175	3	+	21477278	21496606	789624	10	119,163,69,243,261,231,81,750,164,2630,	0,367,741,10696,11835,12418,15541,15753,18474,19791,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	21477175	21499171	chr14:21477175-21499171	1	+	21477278	21496606	789624	9	109,69,243,261,231,81,750,164,2626,	0,320,10275,11414,11997,15120,15332,18053,19370,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	21477181	21496227	chr14:21477181-21496227	0	+	21477181	21477181	8553170	7	103,69,1400,231,81,750,999,	0,314,10269,11991,15114,15326,18047,
#Partially deleted in new
chr14	21477202	21496755	chr14:21477202-21496755	0	+	21477278	21488608	789624	9	82,69,152,261,231,81,750,164,210,	0,293,10248,11387,11970,15093,15305,18026,19343,
#Partially deleted in new
chr14	21477223	21488789	chr14:21477223-21488789	0	+	21477278	21482608	789624	5	61,69,60,243,200,	0,272,5328,10227,11366,
#Partially deleted in new
chr14	21477223	21488850	chr14:21477223-21488850	0	+	21477278	21488850	789624	3	61,243,261,	0,10227,11366,
#Partially deleted in new
chr14	21477232	21488708	chr14:21477232-21488708	0	+	21477232	21477232	8553170	4	52,69,410,119,	0,263,10218,11357,
#Partially deleted in new
chr14	21477237	21488751	chr14:21477237-21488751	0	+	21477278	21487476	789624	4	47,97,243,162,	0,258,10213,11352,
#Partially deleted in new
chr14	21477263	21487693	chr14:21477263-21487693	0	+	21477263	21477263	8553170	2	301,243,	0,10187,
#Partially deleted in new
chr14	21488557	21492606	chr14:21488557-21492606	0	+	21488557	21488557	8553170	4	293,231,81,99,	0,615,3738,3950,
#Deleted in new
chr14	21492096	21492812	chr14:21492096-21492812	0	+	21492096	21492096	8553170	2	280,305,	0,411,
#Partially deleted in new
chr14	21498132	21503829	chr14:21498132-21503829	0	-	21499594	21503829	789624	8	237,113,109,39,217,176,405,166,	0,892,1359,1631,2780,3595,5040,5531,
#Partially deleted in new
chr14	21498137	21511375	chr14:21498137-21511375	3	-	21498257	21511223	0	11	232,113,66,109,39,188,217,176,405,218,252,	0,887,1168,1354,1626,2357,2775,3590,5035,5526,12986,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	21498145	21504942	chr14:21498145-21504942	0	-	21498145	21498145	8553170	5	224,576,39,405,1279,	0,879,1618,5027,5518,
#Partially deleted in new
chr14	21498145	21503829	chr14:21498145-21503829	0	-	21498145	21498145	8553170	9	224,113,66,109,39,188,217,176,657,	0,879,1160,1346,1618,2349,2767,3582,5027,
#Partially deleted in new
chr14	21498161	21511340	chr14:21498161-21511340	0	-	21503219	21511223	789624	10	208,576,39,188,217,176,119,72,218,217,	0,863,1602,2333,2751,3566,5011,5344,5502,12962,
#Partially deleted in new
chr14	21498172	21511310	chr14:21498172-21511310	0	-	21501770	21511223	789624	9	197,576,39,188,217,97,405,218,187,	0,852,1591,2322,2740,3555,5000,5491,12951,
#Partially deleted in new
chr14	21499024	21511338	chr14:21499024-21511338	0	-	21501114	21511223	789624	9	113,66,109,39,188,217,405,218,215,	0,281,467,739,1470,1888,4148,4639,12099,
#Partially deleted in new
chr14	21501151	21511340	chr14:21501151-21511340	0	-	21501151	21501151	8553170	4	752,405,218,217,	0,2021,2512,9972,
#Partially deleted in new
chr14	21501689	21511340	chr14:21501689-21511340	0	-	21501689	21501689	8553170	4	135,405,218,217,	0,1483,1974,9434,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	21502378	21511259	chr14:21502378-21511259	0	-	21502378	21502378	8553170	3	1199,218,136,	0,1285,8745,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	21503403	21509554	chr14:21503403-21509554	0	-	21503403	21503430	789624	4	174,218,100,71,	0,260,4732,6080,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	21507650	21511340	chr14:21507650-21511340	0	-	21507650	21507650	8553170	2	585,217,	0,3473,
#Deleted in new
chr14	21510567	21511340	chr14:21510567-21511340	0	-	21510567	21510567	8553170	2	346,217,	0,556,
#Deleted in new
chr14	21510654	21511342	chr14:21510654-21511342	0	-	21510654	21510654	8553170	2	326,219,	0,469,
#Partially deleted in new
chr14	21521080	21537216	chr14:21521080-21537216	3	-	21522703	21536921	789624	2	4574,368,	0,15768,
#Deleted in new
chr14	21521082	21522660	chr14:21521082-21522660	3	+	21521082	21521082	8553170	2	217,255,	0,1323,
#Partially deleted in new
chr14	21521082	21536934	chr14:21521082-21536934	1	-	21522032	21536921	789624	3	1162,318,86,	0,4254,15766,
#Deleted in new
chr14	21521536	21526500	chr14:21521536-21526500	1	-	21522032	21526127	789624	3	708,318,440,	0,3800,4524,
#Partially deleted in new
chr14	21521621	21536902	chr14:21521621-21536902	0	-	21522007	21536902	789624	4	623,2099,318,54,	0,1211,3715,15227,
#Deleted in new
chr14	21521650	21526227	chr14:21521650-21526227	1	-	21522007	21526127	789624	4	594,2099,318,167,	0,1182,3686,4410,
#Deleted in new
chr14	21525148	21526213	chr14:21525148-21526213	0	-	21525148	21526127	789624	2	506,153,	0,912,
#Partially deleted in new
chr14	21525244	21537104	chr14:21525244-21537104	0	-	21525244	21525541	789624	2	410,143,	0,11717,
#Partially deleted in new
chr14	21563818	21565084	chr14:21563818-21565084	7	+	21563818	21563818	16724991	1	1266,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	21568519	21580076	chr14:21568519-21580076	1	-	21569802	21570744	789624	2	2242,291,	0,11266,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	21568519	21580076	chr14:21568519-21580076	3	-	21569802	21570744	789624	3	2242,107,291,	0,6306,11266,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	21568519	21580076	chr14:21568519-21580076	0	-	21568519	21568519	8553170	2	1562,291,	0,11266,
#Deleted in new
chr14	21569802	21570744	chr14:21569802-21570744	1	-	21569802	21570744	789624	1	942,	0,
#Deleted in new
chr14	21585289	21586280	chr14:21585289-21586280	7	-	21585289	21585289	16724991	1	991,	0,
#Deleted in new
chr14	21601881	21602825	chr14:21601881-21602825	7	-	21601881	21601881	16724991	1	944,	0,
#Deleted in new
chr14	21611923	21612381	chr14:21611923-21612381	7	-	21611923	21611923	16724991	1	458,	0,
#Deleted in new
chr14	21621837	21622567	chr14:21621837-21622567	3	+	21621903	21622567	789624	2	109,283,	0,447,
#Deleted in new
chr14	21633835	21634940	chr14:21633835-21634940	3	-	21633909	21634842	789624	1	1105,	0,
#Deleted in new
chr14	21642888	21643578	chr14:21642888-21643578	3	+	21642972	21643578	789624	2	127,275,	0,415,
#Deleted in new
chr14	21649727	21650337	chr14:21649727-21650337	7	-	21649727	21649727	16724991	1	610,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	21653834	21667642	chr14:21653834-21667642	3	+	21665082	21666024	789624	4	105,88,94,2568,	0,2667,6818,11240,
#Deleted in new
chr14	21665082	21666024	chr14:21665082-21666024	1	+	21665082	21666024	789624	1	942,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	21667939	21673818	chr14:21667939-21673818	3	-	21669987	21670935	789624	2	3013,729,	0,5150,
#Deleted in new
chr14	21670020	21670920	chr14:21670020-21670920	1	-	21670020	21670920	789624	1	900,	0,
#Partially deleted in new
chr14	21698953	21699151	chr14:21698953-21699151	7	-	21698953	21698953	16724991	1	198,	0,
#Deleted in new
chr14	21712320	21712843	chr14:21712320-21712843	3	+	21712330	21712843	789624	2	74,274,	0,249,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	21714794	21716262	chr14:21714794-21716262	3	-	21714794	21714794	8553170	2	195,375,	0,1093,
#Deleted in new
chr14	21723712	21724321	chr14:21723712-21724321	3	+	21723888	21724321	789624	2	222,297,	0,312,
#Deleted in new
chr14	21736151	21736982	chr14:21736151-21736982	3	+	21736218	21736982	0	2	107,288,	0,543,
#Deleted in new
chr14	21749177	21749705	chr14:21749177-21749705	3	+	21749189	21749705	789624	2	64,288,	0,240,
#Deleted in new
chr14	21750268	21751546	chr14:21750268-21751546	7	+	21750268	21750268	16724991	1	1278,	0,
#Deleted in new
chr14	21768488	21769080	chr14:21768488-21769080	3	+	21768495	21769080	789624	2	116,288,	0,304,
#Deleted in new
chr14	21782992	21783503	chr14:21782992-21783503	3	+	21782992	21783503	789624	2	52,285,	0,226,
#Deleted in new
chr14	21797286	21797886	chr14:21797286-21797886	3	+	21797418	21797886	789624	2	178,295,	0,305,
#Deleted in new
chr14	21811501	21811977	chr14:21811501-21811977	3	+	21811501	21811977	789624	2	46,292,	0,184,
#Deleted in new
chr14	21825471	21826075	chr14:21825471-21826075	3	+	21825507	21826075	789624	2	88,291,	0,313,
#Deleted in new
chr14	21829538	21830070	chr14:21829538-21830070	7	+	21829538	21829538	16724991	2	52,287,	0,245,
#Deleted in new
chr14	21841239	21841774	chr14:21841239-21841774	3	+	21841242	21841774	789624	2	52,288,	0,247,
#Deleted in new
chr14	21846536	21847221	chr14:21846536-21847221	3	+	21846761	21847221	789624	2	271,295,	0,390,
#Deleted in new
chr14	21852557	21853006	chr14:21852557-21853006	3	+	21852557	21853006	789624	2	46,295,	0,154,
#Deleted in new
chr14	21868838	21869365	chr14:21868838-21869365	3	+	21868861	21869365	789624	2	72,288,	0,239,
#Deleted in new
chr14	21887856	21888502	chr14:21887856-21888502	3	+	21887961	21888502	0	2	154,291,	0,355,
#Deleted in new
chr14	21894432	21895030	chr14:21894432-21895030	3	+	21894560	21895030	789624	2	174,295,	0,303,
#Partially deleted in new
chr14	21903076	21904598	chr14:21903076-21904598	7	+	21903076	21903076	16724991	3	46,97,198,	0,154,1324,
#Deleted in new
chr14	21918187	21918756	chr14:21918187-21918756	3	+	21918257	21918756	789624	2	119,291,	0,278,
#Deleted in new
chr14	21924062	21924651	chr14:21924062-21924651	3	+	21924137	21924651	789624	2	124,301,	0,288,
#Deleted in new
chr14	21941127	21941657	chr14:21941127-21941657	3	+	21941183	21941657	789624	2	102,292,	0,238,
#Deleted in new
chr14	21950405	21950654	chr14:21950405-21950654	7	+	21950405	21950405	16724991	1	249,	0,
#Deleted in new
chr14	21962818	21963042	chr14:21962818-21963042	7	-	21962818	21962818	16724991	1	224,	0,
#Deleted in new
chr14	21965450	21966061	chr14:21965450-21966061	3	+	21965506	21966061	0	2	108,291,	0,320,
#Deleted in new
chr14	21978458	21979120	chr14:21978458-21979120	3	+	21978678	21979120	789624	2	266,295,	0,367,
#Deleted in new
chr14	21990495	21990938	chr14:21990495-21990938	3	+	21990495	21990938	789624	2	46,283,	0,160,
#Deleted in new
chr14	21997538	21998168	chr14:21997538-21998168	3	+	21997685	21998168	789624	2	199,285,	0,345,
#Deleted in new
chr14	22003105	22003673	chr14:22003105-22003673	3	+	22003210	22003673	789624	2	151,289,	0,279,
#Deleted in new
chr14	22007511	22008181	chr14:22007511-22008181	3	+	22007628	22008181	789624	2	166,301,	0,369,
#Deleted in new
chr14	22011909	22014964	chr14:22011909-22014964	7	+	22011909	22011909	16724991	1	3055,	0,
#Deleted in new
chr14	22040593	22041153	chr14:22040593-22041153	3	+	22040662	22041153	0	2	121,285,	0,275,
#Deleted in new
chr14	22052513	22053056	chr14:22052513-22053056	3	+	22052520	22053056	0	2	53,290,	0,253,
#Deleted in new
chr14	22066015	22066373	chr14:22066015-22066373	7	+	22066015	22066015	16724991	1	358,	0,
#Deleted in new
chr14	22070556	22071208	chr14:22070556-22071208	3	+	22070689	22071208	0	2	185,279,	0,373,
#Deleted in new
chr14	22086406	22086961	chr14:22086406-22086961	3	+	22086451	22086961	789624	2	97,312,	0,243,
#Deleted in new
chr14	22096031	22096619	chr14:22096031-22096619	0	+	22096049	22096619	789624	2	67,298,	0,290,
#Deleted in new
chr14	22096506	22096608	chr14:22096506-22096608	3	+	22096506	22096608	789624	1	102,	0,
#Deleted in new
chr14	22105342	22105846	chr14:22105342-22105846	3	+	22105342	22105846	789624	2	55,288,	0,216,
#Deleted in new
chr14	22112346	22113031	chr14:22112346-22113031	3	+	22112422	22113031	789624	2	122,281,	0,404,
#Deleted in new
chr14	22123317	22124285	chr14:22123317-22124285	3	+	22123526	22124285	789624	2	249,288,	0,680,
#Deleted in new
chr14	22132552	22133034	chr14:22132552-22133034	3	+	22132552	22133034	789624	2	50,291,	0,191,
#Deleted in new
chr14	22147994	22148633	chr14:22147994-22148633	3	+	22148091	22148633	0	2	143,282,	0,357,
#Deleted in new
chr14	22155078	22155638	chr14:22155078-22155638	7	+	22155078	22155078	16724991	2	52,271,	0,289,
#Deleted in new
chr14	22163237	22163870	chr14:22163237-22163870	3	+	22163348	22163870	0	2	163,306,	0,327,
#Deleted in new
chr14	22168428	22168988	chr14:22168428-22168988	3	+	22168428	22168988	789624	2	52,285,	0,275,
#Deleted in new
chr14	22177272	22177864	chr14:22177272-22177864	7	+	22177272	22177272	16724991	2	49,293,	0,299,
#Deleted in new
chr14	22185561	22186057	chr14:22185561-22186057	7	+	22185561	22185561	16724991	2	54,286,	0,210,
#Deleted in new
chr14	22190157	22190713	chr14:22190157-22190713	7	+	22190157	22190157	16724991	2	49,289,	0,267,
#Deleted in new
chr14	22202582	22203368	chr14:22202582-22203368	3	+	22202582	22203368	789624	2	40,287,	0,499,
#Deleted in new
chr14	22207521	22208129	chr14:22207521-22208129	3	+	22207533	22208129	789624	2	64,285,	0,323,
#Deleted in new
chr14	22221895	22222475	chr14:22221895-22222475	7	+	22221895	22221895	16724991	2	46,284,	0,296,
#Deleted in new
chr14	22226745	22227254	chr14:22226745-22227254	3	+	22226761	22227254	789624	2	68,288,	0,221,
#Deleted in new
chr14	22265748	22266264	chr14:22265748-22266264	7	+	22265748	22265748	16724991	2	52,290,	0,226,
#Partially deleted in new
chr14	22271967	22272563	chr14:22271967-22272563	3	+	22271970	22272563	789624	2	52,301,	0,295,
#Deleted in new
chr14	22281104	22281748	chr14:22281104-22281748	3	+	22281150	22281748	789624	2	95,300,	0,344,
#Deleted in new
chr14	22304053	22304553	chr14:22304053-22304553	3	+	22304053	22304553	789624	2	43,288,	0,212,
#Deleted in new
chr14	22314489	22314919	chr14:22314489-22314919	3	+	22314489	22314919	789624	2	43,274,	0,156,
#Deleted in new
chr14	22320187	22320691	chr14:22320187-22320691	3	+	22320187	22320691	789624	2	52,284,	0,220,
#Deleted in new
chr14	22332921	22334685	chr14:22332921-22334685	7	-	22332921	22332921	16724991	2	555,296,	0,1468,
#Partially deleted in new
chr14	22380679	22482959	chr14:22380679-22482959	1	-	22380679	22380679	8553170	3	1726,118,107,	0,100561,102173,
#Deleted in new
chr14	22381493	22383169	chr14:22381493-22383169	0	-	22381493	22381493	8553170	3	181,55,106,	0,857,1570,
#Partially deleted in new
chr14	22381565	22432739	chr14:22381565-22432739	1	-	22381565	22381565	8553170	6	109,137,55,131,70,74,	0,278,785,19478,22128,51100,
#Partially deleted in new
chr14	22382109	22432739	chr14:22382109-22432739	0	-	22382109	22382109	8553170	4	296,131,70,74,	0,18934,21584,50556,
#Partially deleted in new
chr14	22382369	22432727	chr14:22382369-22432727	1	-	22382369	22382369	8553170	5	36,131,70,272,62,	0,18674,21324,36294,50296,
#Partially deleted in new
chr14	22417835	22418657	chr14:22417835-22418657	3	+	22417835	22417835	8553170	2	137,320,	0,502,
#Partially deleted in new
chr14	22418354	22432739	chr14:22418354-22432739	2	-	22418354	22418354	8553170	2	581,74,	0,14311,
#Deleted in new
chr14	22422370	22423042	chr14:22422370-22423042	3	+	22422545	22423042	789624	2	221,299,	0,373,
#Deleted in new
chr14	22438546	22438554	chr14:22438546-22438554	3	+	22438546	22438554	8553170	1	8,	0,
#Deleted in new
chr14	22439006	22439015	chr14:22439006-22439015	3	+	22439006	22439015	8553170	1	9,	0,
#Deleted in new
chr14	22449112	22449125	chr14:22449112-22449125	3	+	22449112	22449125	8553170	1	13,	0,
#Deleted in new
chr14	22450088	22450139	chr14:22450088-22450139	3	+	22450088	22450139	789624	1	51,	0,
#Deleted in new
chr14	22455248	22455296	chr14:22455248-22455296	3	+	22455248	22455296	789624	1	48,	0,
#Deleted in new
chr14	22456688	22456742	chr14:22456688-22456742	3	+	22456688	22456742	789624	1	54,	0,
#Deleted in new
chr14	22459097	22459156	chr14:22459097-22459156	3	+	22459097	22459156	789624	1	59,	0,
#Partially deleted in new
chr14	22462907	22481289	chr14:22462907-22481289	0	-	22462907	22462907	8553170	3	328,43,49,	0,2336,18333,
#Deleted in new
chr14	22462931	22465787	chr14:22462931-22465787	3	+	22462931	22464322	789624	4	279,66,120,255,	0,842,1272,2601,
#Deleted in new
chr14	22469040	22469698	chr14:22469040-22469698	3	-	22469040	22469614	0	2	304,121,	0,537,
#Deleted in new
chr14	22475315	22475375	chr14:22475315-22475375	3	+	22475315	22475375	789624	1	60,	0,
#Deleted in new
chr14	22476305	22476362	chr14:22476305-22476362	7	+	22476305	22476305	16724991	1	57,	0,
#Deleted in new
chr14	22476552	22476606	chr14:22476552-22476606	3	+	22476552	22476606	789624	1	54,	0,
#Deleted in new
chr14	22477706	22477769	chr14:22477706-22477769	3	+	22477706	22477769	8553170	1	63,	0,
#Deleted in new
chr14	22478871	22478934	chr14:22478871-22478934	3	+	22478871	22478934	789624	1	63,	0,
#Deleted in new
chr14	22479520	22479582	chr14:22479520-22479582	3	+	22479520	22479582	789624	1	62,	0,
#Deleted in new
chr14	22481696	22481753	chr14:22481696-22481753	7	+	22481696	22481696	16724991	1	57,	0,
#Deleted in new
chr14	22482286	22482346	chr14:22482286-22482346	3	+	22482286	22482346	789624	1	60,	0,
#Deleted in new
chr14	22483003	22483069	chr14:22483003-22483069	3	+	22483003	22483069	789624	1	66,	0,
#Deleted in new
chr14	22486227	22486296	chr14:22486227-22486296	3	+	22486227	22486296	789624	1	69,	0,
#Deleted in new
chr14	22487182	22487245	chr14:22487182-22487245	7	+	22487182	22487182	16724991	1	63,	0,
#Deleted in new
chr14	22488592	22488652	chr14:22488592-22488652	3	+	22488592	22488652	789624	1	60,	0,
#Deleted in new
chr14	22489487	22489543	chr14:22489487-22489543	3	+	22489487	22489543	789624	1	56,	0,
#Deleted in new
chr14	22490490	22490553	chr14:22490490-22490553	3	+	22490490	22490553	789624	1	63,	0,
#Deleted in new
chr14	22492850	22492907	chr14:22492850-22492907	3	+	22492850	22492907	789624	1	57,	0,
#Deleted in new
chr14	22493402	22493465	chr14:22493402-22493465	3	+	22493402	22493465	789624	1	63,	0,
#Deleted in new
chr14	22493924	22493990	chr14:22493924-22493990	3	+	22493924	22493990	789624	1	66,	0,
#Deleted in new
chr14	22494820	22494883	chr14:22494820-22494883	3	+	22494820	22494883	789624	1	63,	0,
#Deleted in new
chr14	22495912	22495966	chr14:22495912-22495966	3	+	22495912	22495966	789624	1	54,	0,
#Deleted in new
chr14	22496886	22496952	chr14:22496886-22496952	3	+	22496886	22496952	789624	1	66,	0,
#Deleted in new
chr14	22497656	22497718	chr14:22497656-22497718	3	+	22497656	22497718	789624	1	62,	0,
#Deleted in new
chr14	22499688	22499749	chr14:22499688-22499749	3	+	22499688	22499749	789624	1	61,	0,
#Deleted in new
chr14	22501600	22501663	chr14:22501600-22501663	3	+	22501600	22501663	789624	1	63,	0,
#Deleted in new
chr14	22502230	22502292	chr14:22502230-22502292	3	+	22502230	22502292	789624	1	62,	0,
#Deleted in new
chr14	22503749	22503814	chr14:22503749-22503814	3	+	22503749	22503814	789624	1	65,	0,
#Deleted in new
chr14	22505109	22505167	chr14:22505109-22505167	3	+	22505109	22505167	789624	1	58,	0,
#Deleted in new
chr14	22506643	22506702	chr14:22506643-22506702	3	+	22506643	22506702	789624	1	59,	0,
#Deleted in new
chr14	22507665	22507723	chr14:22507665-22507723	3	+	22507665	22507723	789624	1	58,	0,
#Deleted in new
chr14	22508601	22508658	chr14:22508601-22508658	3	+	22508601	22508658	789624	1	57,	0,
#Deleted in new
chr14	22509340	22509406	chr14:22509340-22509406	3	+	22509340	22509406	789624	1	66,	0,
#Deleted in new
chr14	22510967	22511024	chr14:22510967-22511024	3	+	22510967	22511024	789624	1	57,	0,
#Deleted in new
chr14	22512851	22512908	chr14:22512851-22512908	3	+	22512851	22512908	789624	1	57,	0,
#Deleted in new
chr14	22513938	22513998	chr14:22513938-22513998	3	+	22513938	22513998	789624	1	60,	0,
#Deleted in new
chr14	22515622	22515688	chr14:22515622-22515688	3	+	22515622	22515688	789624	1	66,	0,
#Deleted in new
chr14	22516272	22516331	chr14:22516272-22516331	3	+	22516272	22516331	789624	1	59,	0,
#Deleted in new
chr14	22518445	22518505	chr14:22518445-22518505	3	+	22518445	22518505	789624	1	60,	0,
#Deleted in new
chr14	22518811	22518871	chr14:22518811-22518871	3	+	22518811	22518871	789624	1	60,	0,
#Deleted in new
chr14	22519968	22520031	chr14:22519968-22520031	3	+	22519968	22520031	789624	1	63,	0,
#Deleted in new
chr14	22520415	22520478	chr14:22520415-22520478	3	+	22520415	22520478	789624	1	63,	0,
#Deleted in new
chr14	22522039	22522102	chr14:22522039-22522102	3	+	22522039	22522102	789624	1	63,	0,
#Deleted in new
chr14	22523599	22523654	chr14:22523599-22523654	3	+	22523599	22523654	789624	1	55,	0,
#Deleted in new
chr14	22524324	22524381	chr14:22524324-22524381	3	+	22524324	22524381	789624	1	57,	0,
#Deleted in new
chr14	22525262	22525322	chr14:22525262-22525322	3	+	22525262	22525322	789624	1	60,	0,
#Deleted in new
chr14	22525649	22525715	chr14:22525649-22525715	3	+	22525649	22525715	789624	1	66,	0,
#Deleted in new
chr14	22526843	22526906	chr14:22526843-22526906	3	+	22526843	22526906	789624	1	63,	0,
#Deleted in new
chr14	22528526	22528586	chr14:22528526-22528586	3	+	22528526	22528586	789624	1	60,	0,
#Deleted in new
chr14	22530326	22530378	chr14:22530326-22530378	3	+	22530326	22530378	789624	1	52,	0,
#Deleted in new
chr14	22531075	22531138	chr14:22531075-22531138	3	+	22531075	22531138	789624	1	63,	0,
#Deleted in new
chr14	22531938	22531998	chr14:22531938-22531998	3	+	22531938	22531998	789624	1	60,	0,
#Deleted in new
chr14	22532501	22532561	chr14:22532501-22532561	3	+	22532501	22532561	789624	1	60,	0,
#Deleted in new
chr14	22533496	22533560	chr14:22533496-22533560	3	+	22533496	22533560	789624	1	64,	0,
#Deleted in new
chr14	22535553	22535614	chr14:22535553-22535614	3	+	22535553	22535614	789624	1	61,	0,
#Deleted in new
chr14	22536144	22536204	chr14:22536144-22536204	7	+	22536144	22536144	16724991	1	60,	0,
#Deleted in new
chr14	22537621	22537680	chr14:22537621-22537680	3	+	22537621	22537680	789624	1	59,	0,
#Deleted in new
chr14	22539072	22539134	chr14:22539072-22539134	3	+	22539072	22539134	789624	1	62,	0,
#Deleted in new
chr14	22540246	22540306	chr14:22540246-22540306	3	+	22540246	22540306	789624	1	60,	0,
#Deleted in new
chr14	22542198	22542261	chr14:22542198-22542261	3	+	22542198	22542261	789624	1	63,	0,
#Deleted in new
chr14	22543178	22543240	chr14:22543178-22543240	3	+	22543178	22543240	789624	1	62,	0,
#Deleted in new
chr14	22544070	22544136	chr14:22544070-22544136	3	+	22544070	22544136	789624	1	66,	0,
#Deleted in new
chr14	22545036	22545098	chr14:22545036-22545098	3	+	22545036	22545098	789624	1	62,	0,
#Partially deleted in new
chr14	22547505	22552154	chr14:22547505-22552154	3	+	22547505	22550663	8553170	4	273,45,108,550,	0,2132,3051,4099,
#Deleted in new
chr14	22556310	22557062	chr14:22556310-22557062	3	-	22556310	22556310	789624	3	212,62,112,	0,481,640,
#Deleted in new
chr14	22556639	22559037	chr14:22556639-22559037	3	+	22556639	22556639	8553170	4	203,130,137,311,	0,330,927,2087,
#Partially deleted in new
chr14	22564904	22589269	chr14:22564904-22589269	3	-	22575102	22589157	789624	3	233,175,323,	0,10154,24042,
#Partially deleted in new
chr14	22564906	22575089	chr14:22564906-22575089	0	-	22564906	22564906	8553170	3	231,77,31,	0,2181,10152,
#Partially deleted in new
chr14	22564906	22589220	chr14:22564906-22589220	0	-	22575157	22589157	789624	3	231,175,185,	0,10152,24129,
#Partially deleted in new
chr14	22564907	22589157	chr14:22564907-22589157	1	-	22565111	22589157	789624	2	230,211,	0,24039,
#Partially deleted in new
chr14	22565003	22589222	chr14:22565003-22589222	1	-	22575102	22589157	789624	3	134,175,192,	0,10055,24027,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	22595807	22598946	chr14:22595807-22598946	3	-	22595807	22595807	8553170	2	396,2275,	0,864,
#Partially deleted in new
chr14	22598236	22613215	chr14:22598236-22613215	3	+	22598306	22610948	789624	7	93,89,373,155,112,187,2357,	0,3430,5153,5688,8185,11487,12622,
#Partially deleted in new
chr14	22598289	22604076	chr14:22598289-22604076	0	+	22598306	22603639	789624	5	40,89,107,162,152,	0,3377,5100,5311,5635,
#Partially deleted in new
chr14	22598293	22609807	chr14:22598293-22609807	0	+	22598293	22598293	8553170	7	36,89,373,155,80,112,84,	0,3373,5096,5631,7493,8128,11430,
#Partially deleted in new
chr14	22598297	22603620	chr14:22598297-22603620	0	+	22601715	22603620	789624	3	145,89,231,	0,3369,5092,
#Partially deleted in new
chr14	22598299	22609882	chr14:22598299-22609882	1	+	22598306	22604087	789624	5	30,89,175,166,256,	0,3367,5288,5625,11327,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	22598299	22604256	chr14:22598299-22604256	0	+	22598299	22598299	8553170	3	30,89,867,	0,3367,5090,
#Partially deleted in new
chr14	22598303	22611074	chr14:22598303-22611074	0	+	22598306	22606482	789624	6	26,89,373,112,187,216,	0,3363,5086,8118,11420,12555,
#Partially deleted in new
chr14	22600118	22603410	chr14:22600118-22603410	0	+	22600170	22603410	789624	3	75,89,21,	0,1548,3271,
#Partially deleted in new
chr14	22601666	22610909	chr14:22601666-22610909	0	+	22601666	22603930	789624	6	89,68,155,112,187,51,	0,1723,2258,4755,8057,9192,
#Deleted in new
chr14	22611540	22612358	chr14:22611540-22612358	0	+	22611540	22611540	8553170	2	152,355,	0,463,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	22630928	22644352	chr14:22630928-22644352	3	-	22633767	22634811	789624	2	3910,255,	0,13169,
#Deleted in new
chr14	22694097	22694535	chr14:22694097-22694535	7	-	22694097	22694097	16724991	1	438,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	22701475	22766457	chr14:22701475-22766457	3	-	22701475	22701475	8553170	5	1536,122,119,120,34,	0,15620,60549,62647,64948,
#Deleted in new
chr14	22702142	22703065	chr14:22702142-22703065	7	+	22702142	22702142	16724991	1	923,	0,
#Partially deleted in new
chr14	22702610	22766562	chr14:22702610-22766562	0	-	22702610	22702610	8553170	3	401,122,139,	0,14485,63813,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	22702992	22766560	chr14:22702992-22766560	1	-	22702992	22702992	8553170	5	19,137,122,119,137,	0,3286,14103,59032,63431,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	22706214	22766547	chr14:22706214-22766547	0	-	22706214	22706214	8553170	4	201,125,120,124,	0,10881,57908,60209,
#Partially deleted in new
chr14	22723475	22726572	chr14:22723475-22726572	7	-	22723475	22723475	16724991	4	86,137,354,190,	0,185,2449,2907,
#Deleted in new
chr14	22756760	22756829	chr14:22756760-22756829	3	-	22756760	22756760	8553170	1	69,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	22764384	22766530	chr14:22764384-22766530	0	-	22764384	22764384	8553170	2	273,107,	0,2039,
#Partially deleted in new
chr14	22766521	22771789	chr14:22766521-22771789	1	+	22766521	22771558	789624	10	243,162,214,144,86,165,105,163,81,356,	0,726,1436,3269,3671,3939,4283,4496,4746,4912,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	22766521	22773041	chr14:22766521-22773041	3	+	22766521	22771558	789624	10	243,162,214,144,86,165,105,163,81,1608,	0,726,1436,3269,3671,3939,4283,4496,4746,4912,
#Deleted in new
chr14	22766674	22768929	chr14:22766674-22768929	0	+	22766674	22766674	8553170	3	90,162,972,	0,573,1283,
#Partially deleted in new
chr14	22766678	22771798	chr14:22766678-22771798	1	+	22766701	22771558	789624	10	86,162,214,144,86,165,105,163,81,365,	0,569,1279,3112,3514,3782,4126,4339,4589,4755,
#Partially deleted in new
chr14	22766687	22770563	chr14:22766687-22770563	0	+	22766687	22766687	8553170	4	77,162,214,371,	0,560,1270,3505,
#Deleted in new
chr14	22766687	22767708	chr14:22766687-22767708	0	+	22766687	22766687	8553170	2	77,461,	0,560,
#Partially deleted in new
chr14	22766689	22770540	chr14:22766689-22770540	0	+	22766689	22768039	789624	6	75,92,214,144,86,80,	0,628,1268,3101,3503,3771,
#Partially deleted in new
chr14	22766691	22770520	chr14:22766691-22770520	0	+	22768125	22770520	789624	6	223,162,214,144,86,60,	0,556,1266,3099,3501,3769,
#Partially deleted in new
chr14	22766701	22771771	chr14:22766701-22771771	1	+	22766701	22771558	789624	9	63,162,214,144,86,165,105,163,338,	0,546,1256,3089,3491,3759,4103,4316,4732,
#Partially deleted in new
chr14	22766702	22771754	chr14:22766702-22771754	0	+	22766702	22766702	8553170	9	62,162,214,138,433,105,163,81,321,	0,545,1255,3094,3490,4102,4315,4565,4731,
#Partially deleted in new
chr14	22766718	22771730	chr14:22766718-22771730	1	+	22767036	22771558	789624	10	333,162,214,144,86,165,105,163,81,297,	0,529,1239,3072,3474,3742,4086,4299,4549,4715,
#Deleted in new
chr14	22766924	22768261	chr14:22766924-22768261	0	+	22766924	22766924	8553170	3	127,162,304,	0,323,1033,
#Partially deleted in new
chr14	22767281	22771761	chr14:22767281-22771761	0	+	22767281	22767281	8553170	8	128,214,144,433,105,163,81,328,	0,676,2509,2911,3523,3736,3986,4152,
#Partially deleted in new
chr14	22773221	22819796	chr14:22773221-22819796	1	-	22773609	22813398	789624	11	495,184,150,97,104,124,145,126,541,138,159,	0,711,1132,2222,2611,2973,5571,6704,39678,42092,46416,
#Partially deleted in new
chr14	22773221	22819811	chr14:22773221-22819811	3	-	22773609	22813398	789624	11	495,184,150,97,104,124,145,126,541,132,174,	0,711,1132,2222,2611,2973,5571,6704,39678,42098,46416,
#Partially deleted in new
chr14	22773224	22815803	chr14:22773224-22815803	1	-	22773609	22813398	789624	10	492,184,150,97,104,124,145,126,541,484,	0,708,1129,2219,2608,2970,5568,6701,39675,42095,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	22773224	22816477	chr14:22773224-22816477	0	-	22775501	22813398	789624	9	492,184,150,97,124,145,126,541,1158,	0,708,1129,2219,2970,5568,6701,39675,42095,
#Partially deleted in new
chr14	22773252	22819796	chr14:22773252-22819796	1	-	22773609	22813398	789624	10	464,184,150,97,104,124,145,126,541,159,	0,680,1101,2191,2580,2942,5540,6673,39647,46385,
#Partially deleted in new
chr14	22773289	22815898	chr14:22773289-22815898	1	-	22773609	22813398	789624	11	427,184,150,97,104,124,145,126,541,132,68,	0,643,1064,2154,2543,2905,5503,6636,39610,42030,42541,
#Partially deleted in new
chr14	22773315	22780475	chr14:22773315-22780475	0	-	22773315	22773315	8553170	9	401,184,150,97,104,124,145,126,170,	0,617,1038,2128,2517,2879,5477,6610,6990,
#Partially deleted in new
chr14	22773572	22819721	chr14:22773572-22819721	1	-	22773609	22776290	789624	9	144,184,150,97,104,124,145,126,84,	0,360,781,1871,2260,2622,5220,6353,46065,
#Partially deleted in new
chr14	22773572	22775799	chr14:22773572-22775799	0	-	22773572	22773572	8553170	4	144,184,150,356,	0,360,781,1871,
#Partially deleted in new
chr14	22773634	22776232	chr14:22773634-22776232	0	-	22773634	22776232	789624	5	82,184,97,104,38,	0,298,1809,2198,2560,
#Partially deleted in new
chr14	22812904	22815876	chr14:22812904-22815876	0	-	22812904	22813398	789624	3	536,138,46,	0,2409,2926,
#Partially deleted in new
chr14	22812974	22829820	chr14:22812974-22829820	0	-	22812974	22813398	789624	5	466,132,49,120,80,	0,2345,10049,10321,16766,
#Partially deleted in new
chr14	22813031	22815182	chr14:22813031-22815182	0	-	22813031	22813398	789624	2	409,110,	0,2041,
#Partially deleted in new
chr14	22813048	22822963	chr14:22813048-22822963	0	-	22813048	22813398	789624	3	392,132,45,	0,2271,9870,
#Partially deleted in new
chr14	22813054	22815523	chr14:22813054-22815523	0	-	22813054	22813398	789624	2	386,210,	0,2259,
#Partially deleted in new
chr14	22813078	22816199	chr14:22813078-22816199	0	-	22813078	22813398	789624	3	362,132,78,	0,2241,3043,
#Partially deleted in new
chr14	22813266	22823411	chr14:22813266-22823411	0	-	22813266	22813398	789624	4	174,132,319,116,	0,2053,7855,10029,
#Partially deleted in new
chr14	22813307	22815467	chr14:22813307-22815467	0	-	22813307	22813398	789624	3	133,189,154,	0,1387,2006,
#Partially deleted in new
chr14	22813403	22823436	chr14:22813403-22823436	0	-	22813403	22813403	8553170	5	37,132,111,49,252,	0,1916,7718,9620,9781,
#Partially deleted in new
chr14	22813417	22823444	chr14:22813417-22823444	0	-	22813417	22813417	8553170	5	23,132,119,49,260,	0,1902,6220,9606,9767,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	22815322	22820860	chr14:22815322-22820860	0	-	22815322	22815322	8553170	2	129,346,	0,5192,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	22829878	22832078	chr14:22829878-22832078	0	+	22829878	22829878	8553170	3	70,58,1892,	0,174,308,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	22829882	22835037	chr14:22829882-22835037	1	+	22829912	22834321	0	5	58,61,68,65,866,	0,167,304,3535,4289,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	22829886	22835037	chr14:22829886-22835037	3	+	22829912	22834321	0	5	54,58,68,65,866,	0,166,300,3531,4285,
#Deleted in new
chr14	22829886	22830669	chr14:22829886-22830669	0	+	22829886	22829886	8553170	3	54,58,483,	0,166,300,
#Deleted in new
chr14	22829886	22830541	chr14:22829886-22830541	0	+	22829886	22829886	8553170	2	224,355,	0,300,
#Partially deleted in new
chr14	22829886	22834346	chr14:22829886-22834346	0	+	22829886	22829886	8553170	4	54,68,65,175,	0,300,3531,4285,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	22829894	22834717	chr14:22829894-22834717	1	+	22833437	22834321	0	4	216,68,65,546,	0,292,3523,4277,
#Partially deleted in new
chr14	22829902	22834346	chr14:22829902-22834346	1	+	22829912	22834278	789624	5	38,58,68,72,175,	0,150,284,3515,4269,
#Partially deleted in new
chr14	22829905	22834345	chr14:22829905-22834345	1	+	22833437	22834321	0	5	205,68,74,65,174,	0,281,1058,3512,4266,
#Partially deleted in new
chr14	22829909	22834234	chr14:22829909-22834234	0	+	22829912	22834234	789624	4	31,58,68,63,	0,143,277,4262,
#Partially deleted in new
chr14	22829912	22834347	chr14:22829912-22834347	1	+	22829912	22834278	0	4	28,61,68,176,	0,137,274,4259,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	22829913	22834828	chr14:22829913-22834828	1	+	22830248	22834321	789624	3	197,68,657,	0,273,4258,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	22829915	22834977	chr14:22829915-22834977	1	+	22831005	22834298	789624	5	33,61,68,74,806,	0,134,271,1048,4256,
#Partially deleted in new
chr14	22829920	22834347	chr14:22829920-22834347	1	+	22833437	22834321	0	5	28,61,68,65,176,	0,129,266,3497,4251,
#Partially deleted in new
chr14	22829928	22833468	chr14:22829928-22833468	0	+	22829928	22829928	8553170	4	182,68,74,51,	0,258,1035,3489,
#Partially deleted in new
chr14	22830048	22834346	chr14:22830048-22834346	1	+	22833437	22834278	789624	5	62,68,74,72,175,	0,138,915,3369,4123,
#Partially deleted in new
chr14	22833266	22834282	chr14:22833266-22834282	0	+	22833266	22833266	8553170	2	216,111,	0,905,
#Partially deleted in new
chr14	22836556	22847761	chr14:22836556-22847761	3	+	22836817	22846039	0	10	369,149,123,308,162,161,139,151,116,2054,	0,4934,5356,5853,6700,7153,7814,8073,8694,9151,
#Partially deleted in new
chr14	22836559	22841684	chr14:22836559-22841684	0	+	22836559	22836559	8553170	2	366,194,	0,4931,
#Partially deleted in new
chr14	22836575	22849027	chr14:22836575-22849027	0	+	22836575	22836575	8553170	10	350,149,123,308,162,161,139,151,116,81,	0,4915,5337,5834,6681,7134,7795,8054,8675,12371,
#Deleted in new
chr14	22836619	22837286	chr14:22836619-22837286	0	+	22836817	22837286	789624	2	306,106,	0,561,
#Partially deleted in new
chr14	22837311	22842593	chr14:22837311-22842593	0	+	22837311	22842593	789624	4	126,149,123,184,	0,4179,4601,5098,
#Deleted in new
chr14	22841620	22842468	chr14:22841620-22842468	0	+	22841620	22841620	8553170	2	19,556,	0,292,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	22852615	22852728	chr14:22852615-22852728	3	-	22852615	22852615	8553170	1	113,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	22867817	22867917	chr14:22867817-22867917	3	+	22867817	22867817	8553170	1	100,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	22871612	22881580	chr14:22871612-22881580	3	+	22872303	22877527	789624	7	725,45,136,191,1018,130,4641,	0,1125,1698,3442,3742,5076,5327,
#Partially deleted in new
chr14	22872303	22879310	chr14:22872303-22879310	1	+	22872303	22879201	789624	8	34,45,136,191,1018,130,114,112,	0,434,1007,2751,3051,4385,4636,6895,
#Partially deleted in new
chr14	22873084	22875866	chr14:22873084-22875866	0	+	22873084	22873084	8553170	3	362,191,512,	0,1970,2270,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	22875135	22880392	chr14:22875135-22880392	0	+	22875135	22879201	789624	5	110,1018,130,114,1194,	0,219,1553,1804,4063,
#Deleted in new
chr14	22876716	22878083	chr14:22876716-22878083	0	+	22876716	22876716	8553170	4	102,114,170,100,	0,223,710,1267,
#Deleted in new
chr14	22883164	22887686	chr14:22883164-22887686	3	+	22883287	22886909	0	5	226,342,74,208,1073,	0,1509,2101,2859,3449,
#Deleted in new
chr14	22883221	22886843	chr14:22883221-22886843	1	+	22883287	22886244	0	3	169,342,820,	0,1452,2802,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	22893205	22919184	chr14:22893205-22919184	3	-	22901729	22911393	0	14	8528,70,120,196,66,138,153,118,54,174,48,113,76,186,	0,8608,8774,8981,11055,11669,11888,12130,12400,12989,15127,16277,18122,25793,
#Partially deleted in new
chr14	22900644	22919129	chr14:22900644-22919129	1	-	22901729	22904988	789624	11	1089,70,120,196,66,138,128,118,174,48,131,	0,1169,1335,1542,3616,4230,4449,4691,5550,7688,18354,
#Partially deleted in new
chr14	22900765	22919182	chr14:22900765-22919182	1	-	22901729	22911393	0	13	968,70,120,196,66,138,153,118,54,174,113,76,184,	0,1048,1214,1421,3495,4109,4328,4570,4840,5429,8717,10562,18233,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	22900765	22919136	chr14:22900765-22919136	0	-	22900765	22900765	8553170	14	968,70,120,2004,66,138,153,118,54,174,48,113,76,138,	0,1048,1214,1421,3495,4109,4328,4570,4840,5429,7567,8717,10562,18233,
#Partially deleted in new
chr14	22900776	22919178	chr14:22900776-22919178	1	-	22901729	22911393	0	12	957,70,120,196,66,138,153,118,174,113,76,180,	0,1037,1203,1410,3484,4098,4317,4559,5418,8706,10551,18222,
#Partially deleted in new
chr14	22901335	22919178	chr14:22901335-22919178	1	-	22901729	22905398	789624	12	398,70,120,196,66,138,153,118,54,174,76,180,	0,478,644,851,2925,3539,3758,4000,4270,4859,9992,17663,
#Partially deleted in new
chr14	22901564	22905146	chr14:22901564-22905146	0	-	22901729	22905146	789624	7	169,70,120,196,66,134,53,	0,249,415,622,2696,3310,3529,
#Deleted in new
chr14	22901579	22902432	chr14:22901579-22902432	0	-	22901579	22901579	8553170	4	154,70,120,246,	0,234,400,607,
#Deleted in new
chr14	22901671	22902241	chr14:22901671-22902241	0	-	22901809	22902241	789624	3	212,120,55,	0,308,515,
#Partially deleted in new
chr14	22901817	22904084	chr14:22901817-22904084	0	-	22901817	22901817	8553170	4	66,120,196,90,	0,162,369,2177,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	22902961	22919149	chr14:22902961-22919149	0	-	22902961	22902961	8553170	11	1229,66,138,153,118,54,174,48,113,76,151,	0,1299,1913,2132,2374,2644,3233,5371,6521,8366,16037,
#Partially deleted in new
chr14	22904245	22905566	chr14:22904245-22905566	0	-	22904245	22904245	8553170	4	81,138,153,231,	0,629,848,1090,
#Partially deleted in new
chr14	22904884	22919138	chr14:22904884-22919138	0	-	22904884	22905398	789624	6	128,153,118,174,113,140,	0,209,451,1310,4598,14114,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	22905093	22905953	chr14:22905093-22905953	0	-	22905093	22905093	8553170	3	153,118,348,	0,242,512,
#Partially deleted in new
chr14	22905157	22919165	chr14:22905157-22919165	0	-	22905157	22905398	789624	5	89,118,54,174,167,	0,178,448,1037,13841,
#Partially deleted in new
chr14	22905333	22919136	chr14:22905333-22919136	0	-	22905333	22905333	8553170	5	120,174,48,76,138,	0,861,2999,5994,13665,
#Partially deleted in new
chr14	22905335	22919182	chr14:22905335-22919182	0	-	22905335	22905398	789624	4	118,174,76,184,	0,859,5992,13663,
#Partially deleted in new
chr14	22905395	22919149	chr14:22905395-22919149	0	-	22905395	22905395	8553170	6	58,54,174,48,76,151,	0,210,799,2937,5932,13603,
#Partially deleted in new
chr14	22905422	22919137	chr14:22905422-22919137	0	-	22905422	22911393	789624	6	31,174,48,113,76,139,	0,772,2910,4060,5905,13576,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	22905584	22919149	chr14:22905584-22919149	0	-	22905584	22905584	8553170	4	784,113,76,151,	0,3898,5743,13414,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	22906014	22919149	chr14:22906014-22919149	0	-	22906014	22906014	8553170	3	354,76,151,	0,5313,12984,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	22906027	22919110	chr14:22906027-22919110	0	-	22906027	22906027	8553170	5	341,48,113,76,112,	0,2305,3455,5300,12971,
#Partially deleted in new
chr14	22906200	22919149	chr14:22906200-22919149	0	-	22906200	22906200	8553170	5	168,67,113,76,151,	0,2132,3282,5127,12798,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	22908531	22919149	chr14:22908531-22919149	0	-	22908531	22908531	8553170	4	209,113,76,151,	0,951,2796,10467,
#Partially deleted in new
chr14	22909482	22917556	chr14:22909482-22917556	0	-	22909482	22911393	789624	3	113,76,78,	0,1845,7996,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	22909489	22911792	chr14:22909489-22911792	0	-	22909489	22911393	789624	2	106,465,	0,1838,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	22917563	22919087	chr14:22917563-22919087	0	-	22917563	22917563	8553170	2	239,89,	0,1435,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	22918946	22923407	chr14:22918946-22923407	1	+	22918946	22918946	789624	2	2174,439,	0,4022,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	22919620	22923251	chr14:22919620-22923251	0	+	22919620	22919620	8553170	2	578,280,	0,3351,
#Partially deleted in new
chr14	22920510	22929585	chr14:22920510-22929585	3	-	22920903	22929361	0	17	546,65,117,94,110,176,123,59,78,162,164,50,113,135,86,119,334,	0,1665,1932,2231,2540,3497,3759,3968,4121,4368,5622,5995,6191,7015,7615,7986,8741,
#Partially deleted in new
chr14	22920524	22929401	chr14:22920524-22929401	1	-	22920903	22929225	0	17	532,65,117,94,110,176,123,59,78,162,164,50,113,135,86,119,235,	0,1651,1918,2217,2526,3483,3745,3954,4107,4354,5608,5981,6177,7001,7601,7972,8642,
#Partially deleted in new
chr14	22920528	22929356	chr14:22920528-22929356	1	-	22920903	22929225	0	13	528,65,117,94,110,176,123,59,78,162,86,119,190,	0,1647,1914,2213,2522,3479,3741,3950,4103,4350,7597,7968,8638,
#Partially deleted in new
chr14	22920528	22922821	chr14:22920528-22922821	0	-	22920528	22920528	8553170	5	203,217,65,117,80,	0,311,1647,1914,2213,
#Partially deleted in new
chr14	22920528	22922240	chr14:22920528-22922240	0	-	22920680	22922240	789624	3	203,69,65,	0,459,1647,
#Partially deleted in new
chr14	22920529	22929391	chr14:22920529-22929391	1	-	22920903	22929225	0	16	527,65,117,94,110,176,123,59,78,162,164,50,113,89,119,225,	0,1646,1913,2212,2521,3478,3740,3949,4102,4349,5603,5976,6172,6996,7967,8637,
#Partially deleted in new
chr14	22920638	22923403	chr14:22920638-22923403	0	+	22920638	22920638	8553170	2	482,325,	0,2440,
#Partially deleted in new
chr14	22920809	22924179	chr14:22920809-22924179	0	-	22921046	22924179	789624	6	247,31,117,94,110,172,	0,1400,1633,1932,2241,3198,
#Partially deleted in new
chr14	22920824	22923162	chr14:22920824-22923162	0	-	22920903	22923162	789624	5	229,65,117,94,112,	0,1351,1618,1917,2226,
#Partially deleted in new
chr14	22920856	22929365	chr14:22920856-22929365	0	-	22927595	22929225	789624	16	200,65,117,94,110,176,123,59,78,162,164,50,113,135,86,199,	0,1319,1586,1885,2194,3151,3413,3622,3775,4022,5276,5649,5845,6669,7269,8310,
#Partially deleted in new
chr14	22920875	22929408	chr14:22920875-22929408	1	-	22920903	22929361	0	16	181,65,117,94,110,176,123,59,78,162,164,50,113,89,119,157,	0,1300,1567,1866,2175,3132,3394,3603,3756,4003,5257,5630,5826,6650,7621,8376,
#Partially deleted in new
chr14	22920910	22926830	chr14:22920910-22926830	3	+	22920910	22920910	8553170	4	210,126,141,370,	0,2168,3390,5550,
#Partially deleted in new
chr14	22921037	22926825	chr14:22921037-22926825	0	+	22921037	22921037	8553170	3	83,233,365,	0,1934,5423,
#Partially deleted in new
chr14	22921037	22926619	chr14:22921037-22926619	0	+	22921037	22921037	8553170	4	83,236,141,159,	0,1931,3263,5423,
#Partially deleted in new
chr14	22921040	22926900	chr14:22921040-22926900	0	+	22921040	22921040	8553170	3	80,141,440,	0,3260,5420,
#Deleted in new
chr14	22922131	22922910	chr14:22922131-22922910	0	-	22922131	22922131	8553170	2	428,169,	0,610,
#Deleted in new
chr14	22924161	22925046	chr14:22924161-22925046	0	-	22924161	22925046	789624	5	22,87,59,78,168,	0,144,317,470,717,
#Partially deleted in new
chr14	22924316	22928143	chr14:22924316-22928143	0	-	22924316	22928143	789624	9	76,59,78,162,164,32,113,135,18,	0,162,315,562,1816,2207,2385,3209,3809,
#Partially deleted in new
chr14	22924498	22926456	chr14:22924498-22926456	0	-	22924498	22926165	789624	4	39,78,162,324,	0,133,380,1634,
#Partially deleted in new
chr14	22924637	22929392	chr14:22924637-22929392	0	-	22924637	22929361	789624	5	72,162,86,119,141,	0,241,3488,3859,4614,
#Partially deleted in new
chr14	22924662	22929365	chr14:22924662-22929365	0	-	22924662	22924662	8553170	5	47,162,86,119,147,	0,216,3463,3834,4556,
#Partially deleted in new
chr14	22924999	22929373	chr14:22924999-22929373	0	-	22927595	22929361	789624	6	41,164,50,113,89,122,	0,1133,1506,1702,2526,4252,
#Partially deleted in new
chr14	22926132	22929351	chr14:22926132-22929351	0	-	22926132	22926132	8553170	7	164,50,113,135,86,119,133,	0,373,569,1393,1993,2364,3086,
#Partially deleted in new
chr14	22926234	22929376	chr14:22926234-22929376	0	-	22926234	22929361	789624	6	62,50,113,86,119,125,	0,271,467,1891,2262,3017,
#Partially deleted in new
chr14	22926237	22929392	chr14:22926237-22929392	0	-	22927595	22929361	789624	6	59,50,113,135,86,141,	0,268,464,1288,1888,3014,
#Partially deleted in new
chr14	22926239	22929376	chr14:22926239-22929376	0	-	22926239	22929361	789624	6	57,50,113,135,91,125,	0,266,462,1286,1886,3012,
#Partially deleted in new
chr14	22926274	22929081	chr14:22926274-22929081	0	-	22926274	22928599	789624	7	22,50,113,135,86,119,52,	0,231,427,1251,1851,2222,2755,
#Partially deleted in new
chr14	22926480	22927596	chr14:22926480-22927596	0	-	22926480	22926480	8553170	3	75,113,71,	0,221,1045,
#Partially deleted in new
chr14	22926736	22929368	chr14:22926736-22929368	0	-	22926736	22929361	789624	5	78,135,116,119,117,	0,789,1389,1760,2515,
#Partially deleted in new
chr14	22927525	22929351	chr14:22927525-22929351	0	-	22927525	22927525	8553170	3	135,490,18,	0,600,1808,
#Partially deleted in new
chr14	22927595	22929361	chr14:22927595-22929361	1	-	22927595	22929361	789624	2	19,110,	0,1656,
#Deleted in new
chr14	22928130	22929394	chr14:22928130-22929394	0	-	22928130	22928130	8553170	2	485,143,	0,1121,
#Deleted in new
chr14	22928262	22929376	chr14:22928262-22929376	0	-	22928262	22928262	8553170	2	353,210,	0,904,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	22929608	22954692	chr14:22929608-22954692	1	+	22929608	22929608	789624	3	144,50,362,	0,4034,24722,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	22929644	22955562	chr14:22929644-22955562	3	+	22929644	22929644	8553170	3	108,50,433,	0,3998,25485,
#Partially deleted in new
chr14	22946227	22957154	chr14:22946227-22957154	3	-	22946524	22955154	789624	10	481,69,131,146,97,135,132,143,77,231,	0,943,1373,1640,4086,5327,6100,6313,8872,10696,
#Partially deleted in new
chr14	22946227	22957094	chr14:22946227-22957094	1	-	22946524	22951647	789624	9	481,69,131,146,97,135,132,77,179,	0,943,1373,1640,4086,5327,6100,8872,10688,
#Partially deleted in new
chr14	22946228	22957142	chr14:22946228-22957142	1	-	22946524	22955154	789624	10	480,69,131,146,97,135,132,143,77,227,	0,942,1372,1639,4085,5326,6099,6312,8871,10687,
#Partially deleted in new
chr14	22946228	22955176	chr14:22946228-22955176	0	-	22946228	22946228	8553170	7	480,69,131,97,132,143,77,	0,942,1372,4085,6099,6312,8871,
#Partially deleted in new
chr14	22946235	22957129	chr14:22946235-22957129	1	-	22946524	22955154	789624	9	473,69,131,146,97,132,143,77,206,	0,935,1365,1632,4078,6092,6305,8864,10688,
#Partially deleted in new
chr14	22946235	22957148	chr14:22946235-22957148	1	-	22946524	22955154	789624	7	473,69,131,132,143,77,403,	0,935,1365,6092,6305,8864,10510,
#Partially deleted in new
chr14	22946260	22957126	chr14:22946260-22957126	1	-	22946524	22955154	789624	9	448,69,131,146,97,132,143,77,211,	0,910,1340,1607,4053,6067,6280,8839,10655,
#Partially deleted in new
chr14	22946269	22982258	chr14:22946269-22982258	3	-	22946524	22982258	789624	5	439,69,131,146,50,	0,901,1331,1598,35939,
#Partially deleted in new
chr14	22946269	22957137	chr14:22946269-22957137	1	-	22946524	22955154	789624	9	439,69,131,146,97,132,143,77,392,	0,901,1331,1598,4044,6058,6271,8830,10476,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	22946560	22948234	chr14:22946560-22948234	0	-	22946560	22946560	8553170	3	148,69,634,	0,610,1040,
#Partially deleted in new
chr14	22946616	22952405	chr14:22946616-22952405	0	-	22947606	22952405	789624	6	92,69,131,97,135,78,	0,554,984,3697,4938,5711,
#Deleted in new
chr14	22947308	22948104	chr14:22947308-22948104	0	-	22947308	22947308	8553170	2	423,237,	0,559,
#Partially deleted in new
chr14	22947600	22957161	chr14:22947600-22957161	0	-	22947600	22955154	789624	8	131,146,97,135,132,143,77,246,	0,267,2713,3954,4727,4940,7499,9315,
#Partially deleted in new
chr14	22947701	22957022	chr14:22947701-22957022	0	-	22947701	22955154	789624	6	30,97,132,143,77,99,	0,2612,4626,4839,7398,9222,
#Partially deleted in new
chr14	22947867	22957050	chr14:22947867-22957050	0	-	22947867	22947867	8553170	6	166,97,132,143,77,135,	0,2446,4460,4673,7232,9048,
#Partially deleted in new
chr14	22947886	22957091	chr14:22947886-22957091	0	-	22947886	22947886	8553170	3	147,77,346,	0,7213,8859,
#Partially deleted in new
chr14	22947919	22956943	chr14:22947919-22956943	0	-	22947919	22947919	8553170	7	114,97,135,132,143,77,198,	0,2394,3635,4408,4621,7180,8826,
#Partially deleted in new
chr14	22947960	22957073	chr14:22947960-22957073	0	-	22947960	22947960	8553170	7	73,97,135,132,143,77,158,	0,2353,3594,4367,4580,7139,8955,
#Partially deleted in new
chr14	22950313	22957144	chr14:22950313-22957144	0	-	22950313	22955154	789624	6	97,135,132,143,77,399,	0,1241,2014,2227,4786,6432,
#Partially deleted in new
chr14	22950394	22957061	chr14:22950394-22957061	0	-	22950394	22955154	789624	7	16,135,132,143,77,46,33,	0,1160,1933,2146,4705,6521,6634,
#Partially deleted in new
chr14	22951491	22952683	chr14:22951491-22952683	0	-	22951521	22952683	789624	3	198,132,143,	0,836,1049,
#Partially deleted in new
chr14	22951595	22957094	chr14:22951595-22957094	0	-	22951595	22951647	789624	4	94,132,77,349,	0,732,3504,5150,
#Partially deleted in new
chr14	22956949	22957029	chr14:22956949-22957029	3	-	22956949	22956949	5263520	1	80,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	22971173	22982642	chr14:22971173-22982642	3	-	22973442	22982266	789624	8	2395,69,52,131,63,68,102,1382,	0,2873,3665,3800,5282,5471,7170,10087,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	22971814	22977223	chr14:22971814-22977223	1	-	22973442	22975092	789624	6	1754,69,52,131,63,579,	0,2232,3024,3159,4641,4830,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	22971818	22982338	chr14:22971818-22982338	1	-	22973442	22982266	789624	9	362,644,69,52,131,63,68,102,1078,	0,1106,2228,3020,3155,4637,4826,6525,9442,
#Partially deleted in new
chr14	22974046	22976843	chr14:22974046-22976843	0	-	22974046	22975092	789624	6	69,52,131,63,68,35,	0,792,927,2409,2598,2762,
#Partially deleted in new
chr14	22974046	22977737	chr14:22974046-22977737	0	-	22974046	22975092	789624	6	69,52,131,63,68,268,	0,792,927,2409,2598,3423,
#Deleted in new
chr14	22974654	22975295	chr14:22974654-22975295	0	-	22974654	22974654	8553170	2	236,322,	0,319,
#Deleted in new
chr14	22978611	22981586	chr14:22978611-22981586	0	-	22978932	22981586	789624	2	425,326,	0,2649,
#Partially deleted in new
chr14	22982697	22999078	chr14:22982697-22999078	0	+	22982697	22982697	8553170	4	384,87,208,123,	0,809,7051,16258,
#Partially deleted in new
chr14	22982697	22994151	chr14:22982697-22994151	1	+	22982697	22982697	8553170	4	384,87,208,342,	0,809,7051,11112,
#Partially deleted in new
chr14	22982897	22998423	chr14:22982897-22998423	3	+	22982897	22982897	8553170	3	184,87,318,	0,609,15208,
#Partially deleted in new
chr14	22985907	23010151	chr14:22985907-23010151	3	-	22987214	22999023	789624	7	1727,113,104,62,321,976,51,	0,1995,3834,4158,10040,12519,24193,
#Partially deleted in new
chr14	22986901	23010132	chr14:22986901-23010132	1	-	22987214	22999023	789624	8	498,115,113,104,62,321,976,32,	0,618,1001,2840,3164,9046,11525,23199,
#Partially deleted in new
chr14	22987122	23010128	chr14:22987122-23010128	1	-	22987214	22999023	789624	8	512,113,104,62,321,730,79,28,	0,780,2619,2943,8825,11304,13836,22978,
#Partially deleted in new
chr14	22987128	23010166	chr14:22987128-23010166	1	-	22987214	22999023	789624	7	506,113,104,62,321,730,150,	0,774,2613,2937,8819,11298,22888,
#Partially deleted in new
chr14	22987144	23010122	chr14:22987144-23010122	1	-	22987214	22998483	789624	8	490,113,104,62,321,315,349,22,	0,758,2597,2921,8803,11282,11909,22956,
#Partially deleted in new
chr14	22995947	23010143	chr14:22995947-23010143	0	-	22995947	22998483	789624	5	321,315,103,79,43,	0,2479,3106,5011,14153,
#Partially deleted in new
chr14	22996239	23002769	chr14:22996239-23002769	0	-	22996239	22999023	789624	4	29,730,79,61,	0,2187,4719,6469,
#Partially deleted in new
chr14	22998426	23010143	chr14:22998426-23010143	0	-	22998426	22999023	789624	3	730,79,43,	0,2532,11674,
#Partially deleted in new
chr14	22998614	23010143	chr14:22998614-23010143	0	-	22998614	22999023	789624	2	542,43,	0,11486,
#Partially deleted in new
chr14	22998620	23010133	chr14:22998620-23010133	0	-	22998620	22998620	8553170	4	121,349,79,33,	0,433,2338,11480,
#Partially deleted in new
chr14	22998704	23010143	chr14:22998704-23010143	0	-	22998704	22999023	789624	3	452,73,43,	0,2254,11396,
#Partially deleted in new
chr14	22998720	23010096	chr14:22998720-23010096	0	-	22998720	22998720	8553170	5	52,103,79,66,31,	0,333,2238,6344,11345,
#Partially deleted in new
chr14	22998772	23010143	chr14:22998772-23010143	0	-	22998772	22999023	789624	3	384,161,43,	0,1184,11328,
#Partially deleted in new
chr14	22998787	23010143	chr14:22998787-23010143	0	-	22998787	22999023	789624	2	575,43,	0,11313,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	22998874	23010133	chr14:22998874-23010133	0	-	22998874	22999023	789624	5	282,79,66,111,33,	0,2084,6190,6476,11226,
#Partially deleted in new
chr14	22998990	23010143	chr14:22998990-23010143	0	-	22998990	22999023	789624	2	372,127,	0,11026,
#Partially deleted in new
chr14	22998995	23010143	chr14:22998995-23010143	0	-	22998995	22999023	789624	4	161,161,102,43,	0,961,1963,11105,
#Partially deleted in new
chr14	22998995	23010151	chr14:22998995-23010151	0	-	22998995	22999023	789624	4	161,79,66,135,	0,1963,6069,11021,
#Partially deleted in new
chr14	22999044	23010143	chr14:22999044-23010143	0	-	22999044	22999044	8553170	4	318,79,66,127,	0,1914,6020,10972,
#Partially deleted in new
chr14	22999102	23010143	chr14:22999102-23010143	0	-	22999102	22999102	8553170	4	300,79,66,127,	0,1856,5962,10914,
#Partially deleted in new
chr14	22999120	23007123	chr14:22999120-23007123	0	-	22999120	22999120	8553170	2	282,289,	0,7714,
#Deleted in new
chr14	23005498	23007123	chr14:23005498-23007123	3	-	23005498	23005498	8553170	1	1625,	0,
#Partially deleted in new
chr14	23016542	23034727	chr14:23016542-23034727	0	-	23016630	23034727	789624	3	93,307,44,	0,16825,18141,
#Deleted in new
chr14	23023082	23024217	chr14:23023082-23024217	3	-	23023082	23023082	8553170	1	1135,	0,
#Partially deleted in new
chr14	23025850	23035145	chr14:23025850-23035145	3	-	23026088	23034881	0	3	525,307,462,	0,7517,8833,
#Partially deleted in new
chr14	23025857	23034894	chr14:23025857-23034894	1	-	23026318	23034881	789624	2	518,211,	0,8826,
#Partially deleted in new
chr14	23025857	23034890	chr14:23025857-23034890	1	-	23026353	23034881	0	4	518,85,307,207,	0,1887,7510,8826,
#Partially deleted in new
chr14	23025901	23035230	chr14:23025901-23035230	1	-	23026088	23033563	0	3	474,307,119,	0,7466,9210,
#Partially deleted in new
chr14	23026296	23034885	chr14:23026296-23034885	0	-	23034647	23034881	789624	3	79,307,410,	0,7071,8179,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	23042166	23044276	chr14:23042166-23044276	3	+	23042225	23043128	789624	1	2110,	0,
#Deleted in new
chr14	23047061	23057538	chr14:23047061-23057538	1	-	23047979	23055733	789624	14	313,1019,249,112,122,114,137,254,188,168,120,295,325,136,	0,399,1965,2565,2760,4908,5411,6434,7079,7444,7685,7997,8471,10341,
#Deleted in new
chr14	23047061	23057538	chr14:23047061-23057538	3	-	23047979	23055733	789624	13	313,1019,249,112,122,137,254,188,168,120,295,325,136,	0,399,1965,2565,2760,5411,6434,7079,7444,7685,7997,8471,10341,
#Deleted in new
chr14	23047061	23057538	chr14:23047061-23057538	1	-	23047979	23055733	789624	6	313,1019,28,216,325,136,	0,399,1965,8076,8471,10341,
#Deleted in new
chr14	23047066	23050139	chr14:23047066-23050139	0	-	23047066	23047066	8553170	5	308,1019,249,112,318,	0,394,1960,2560,2755,
#Deleted in new
chr14	23047659	23055826	chr14:23047659-23055826	1	-	23047979	23055733	789624	12	820,249,112,122,114,137,254,188,168,120,295,294,	0,1367,1967,2162,4310,4813,5836,6481,6846,7087,7399,7873,
#Deleted in new
chr14	23047659	23055826	chr14:23047659-23055826	1	-	23047979	23055733	789624	11	820,249,112,122,137,254,188,168,120,295,294,	0,1367,1967,2162,4813,5836,6481,6846,7087,7399,7873,
#Partially deleted in new
chr14	23058563	23071565	chr14:23058563-23071565	1	-	23059147	23071147	789624	12	911,101,325,108,108,146,142,153,131,43,142,441,	0,2520,2734,3604,3852,4365,4872,5541,5791,7402,10912,12561,
#Partially deleted in new
chr14	23058566	23095614	chr14:23058566-23095614	3	-	23059147	23095286	789624	19	908,101,325,108,108,146,142,153,134,43,142,116,219,1263,89,120,112,66,640,	0,2517,2731,3601,3849,4362,4869,5538,5788,7399,10909,19584,20253,20980,23181,31415,31955,34912,36408,
#Partially deleted in new
chr14	23058566	23071561	chr14:23058566-23071561	1	-	23059147	23071542	789624	12	908,101,325,108,108,146,142,153,134,43,142,135,	0,2517,2731,3601,3849,4362,4869,5538,5788,7399,10909,12860,
#Partially deleted in new
chr14	23058566	23071617	chr14:23058566-23071617	1	-	23059147	23071147	789624	13	908,101,325,108,108,146,142,153,134,43,142,62,191,	0,2517,2731,3601,3849,4362,4869,5538,5788,7399,10909,12558,12860,
#Partially deleted in new
chr14	23058566	23095614	chr14:23058566-23095614	1	-	23059147	23095286	789624	18	908,101,325,108,108,146,142,153,134,43,142,116,219,1263,89,112,66,640,	0,2517,2731,3601,3849,4362,4869,5538,5788,7399,10909,19584,20253,20980,23181,31955,34912,36408,
#Partially deleted in new
chr14	23058566	23069525	chr14:23058566-23069525	0	-	23068611	23069525	789624	12	908,101,325,108,108,146,142,117,134,43,1358,50,	0,2517,2731,3601,3849,4362,4869,5538,5788,7399,8747,10909,
#Partially deleted in new
chr14	23058566	23095153	chr14:23058566-23095153	1	-	23059147	23095112	789624	19	908,101,325,108,108,146,142,153,134,43,142,116,219,1263,89,120,112,66,179,	0,2517,2731,3601,3849,4362,4869,5538,5788,7399,10909,19584,20253,20980,23181,31415,31955,34912,36408,
#Partially deleted in new
chr14	23058579	23071565	chr14:23058579-23071565	1	-	23059147	23071147	789624	12	895,101,325,108,108,146,142,153,134,43,142,441,	0,2504,2718,3588,3836,4349,4856,5525,5775,7386,10896,12545,
#Partially deleted in new
chr14	23059058	23095383	chr14:23059058-23095383	1	-	23059147	23095286	789624	19	416,101,325,108,108,146,142,117,131,43,142,116,219,1263,89,120,112,66,409,	0,2025,2239,3109,3357,3870,4377,5046,5296,6907,10417,19092,19761,20488,22689,30923,31463,34420,35916,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	23061501	23064629	chr14:23061501-23064629	0	-	23061501	23061501	8553170	7	121,108,108,146,142,117,275,	0,666,914,1427,1934,2603,2853,
#Partially deleted in new
chr14	23061571	23062770	chr14:23061571-23062770	0	-	23061571	23061571	8553170	3	51,108,355,	0,596,844,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	23062432	23064710	chr14:23062432-23064710	0	-	23062432	23062432	8553170	5	91,146,142,153,356,	0,496,1003,1672,1922,
#Partially deleted in new
chr14	23063039	23064419	chr14:23063039-23064419	0	-	23063039	23063039	8553170	3	538,153,65,	0,1065,1315,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	23063431	23064704	chr14:23063431-23064704	0	-	23063431	23063431	8553170	2	146,600,	0,673,
#Partially deleted in new
chr14	23063453	23071538	chr14:23063453-23071538	0	-	23063453	23071147	789624	7	124,117,134,43,142,62,112,	0,651,901,2512,6022,7671,7973,
#Partially deleted in new
chr14	23063459	23066323	chr14:23063459-23066323	0	-	23063459	23063459	8553170	4	118,117,134,358,	0,645,895,2506,
#Partially deleted in new
chr14	23063464	23066496	chr14:23063464-23066496	0	-	23063464	23063464	8553170	4	113,153,131,531,	0,640,890,2501,
#Deleted in new
chr14	23068362	23071555	chr14:23068362-23071555	0	-	23068362	23068362	8553170	3	339,142,129,	0,1113,3064,
#Deleted in new
chr14	23068390	23071550	chr14:23068390-23071550	0	-	23068390	23068390	8553170	3	74,142,426,	0,1085,2734,
#Partially deleted in new
chr14	23068480	23078870	chr14:23068480-23078870	0	-	23069614	23078870	789624	5	191,142,79,116,51,	0,995,7989,9670,10339,
#Deleted in new
chr14	23069032	23071557	chr14:23069032-23071557	0	-	23069032	23069032	8553170	2	585,131,	0,2394,
#Deleted in new
chr14	23069328	23071201	chr14:23069328-23071201	0	-	23069328	23069328	8553170	2	289,77,	0,1796,
#Deleted in new
chr14	23077796	23079593	chr14:23077796-23079593	0	-	23077796	23077796	8553170	3	470,219,47,	0,1023,1750,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	23094764	23100462	chr14:23094764-23100462	3	+	23097658	23098081	789624	2	855,2805,	0,2893,
#Partially deleted in new
chr14	23095524	23098271	chr14:23095524-23098271	1	+	23097658	23098081	789624	2	95,630,	0,2117,
#Partially deleted in new
chr14	23099117	23104845	chr14:23099117-23104845	0	-	23099281	23104845	789624	13	372,180,230,97,70,175,146,85,126,144,52,85,247,	0,1384,1732,2551,2724,2974,3226,3511,3808,4557,5125,5267,5481,
#Partially deleted in new
chr14	23099281	23104920	chr14:23099281-23104920	1	-	23099281	23104920	789624	14	208,180,230,273,97,70,175,146,85,126,144,52,85,322,	0,1220,1568,2010,2387,2560,2810,3062,3347,3644,4393,4961,5103,5317,
#Partially deleted in new
chr14	23100421	23104968	chr14:23100421-23104968	0	-	23100421	23100421	8553170	9	1344,70,175,146,85,144,52,94,370,	0,1420,1670,1922,2207,3253,3821,3963,4177,
#Partially deleted in new
chr14	23117303	23119616	chr14:23117303-23119616	3	-	23117486	23119091	0	2	519,1035,	0,1278,
#Partially deleted in new
chr14	23125294	23183640	chr14:23125294-23183640	3	-	23127176	23182914	789624	11	2049,178,150,97,104,124,154,126,152,205,877,	0,2724,4355,6166,12626,14129,15176,17784,39990,41041,57469,
#Partially deleted in new
chr14	23125294	23155309	chr14:23125294-23155309	0	-	23128343	23155309	789624	7	2049,346,150,97,154,126,144,	0,2724,4355,6166,15176,17784,29871,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	23125296	23130143	chr14:23125296-23130143	0	-	23125296	23125296	8553170	3	2047,178,494,	0,2722,4353,
#Partially deleted in new
chr14	23125296	23154450	chr14:23125296-23154450	1	-	23127176	23143194	789624	8	2047,178,150,97,104,124,126,192,	0,2722,4353,6164,12624,14127,17782,28962,
#Partially deleted in new
chr14	23125301	23183641	chr14:23125301-23183641	1	-	23127261	23182914	789624	6	2042,154,126,152,205,878,	0,15169,17777,39983,41034,57462,
#Partially deleted in new
chr14	23126667	23154401	chr14:23126667-23154401	1	-	23127176	23143103	789624	9	676,178,150,97,104,124,154,126,143,	0,1351,2982,4793,11253,12756,13803,16411,27591,
#Partially deleted in new
chr14	23126750	23155458	chr14:23126750-23155458	1	-	23127176	23155358	789624	9	593,178,150,97,104,124,154,126,293,	0,1268,2899,4710,11170,12673,13720,16328,28415,
#Partially deleted in new
chr14	23126758	23154393	chr14:23126758-23154393	0	-	23138023	23143103	789624	8	585,178,150,97,104,124,126,135,	0,1260,2891,4702,11162,12665,16320,27500,
#Partially deleted in new
chr14	23127025	23166465	chr14:23127025-23166465	1	-	23129668	23143103	789624	12	65,93,178,150,97,9,93,124,154,126,152,130,	0,225,993,2624,4435,10895,10906,12398,13445,16053,38259,39310,
#Partially deleted in new
chr14	23129260	23138019	chr14:23129260-23138019	0	-	23129260	23129260	8553170	3	539,97,99,	0,2200,8660,
#Partially deleted in new
chr14	23129597	23138211	chr14:23129597-23138211	0	-	23129597	23129597	8553170	3	202,97,291,	0,1863,8323,
#Partially deleted in new
chr14	23139423	23146932	chr14:23139423-23146932	0	-	23139423	23139423	8553170	4	124,154,126,168,	0,1047,3655,7341,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	23156308	23156414	chr14:23156308-23156414	3	-	23156308	23156308	8553170	1	106,	0,
#Partially deleted in new
chr14	23166408	23183674	chr14:23166408-23183674	0	-	23166408	23182914	789624	3	132,192,212,	0,16355,17054,
#Partially deleted in new
chr14	23166457	23183650	chr14:23166457-23183650	0	-	23166457	23182914	789624	3	83,275,300,	0,16306,16893,
#Partially deleted in new
chr14	23185315	23273405	chr14:23185315-23273405	3	+	23240345	23272891	789624	16	175,77,101,53,75,116,61,29,47,43,61,49,40,98,62,583,	0,8009,55029,57940,59006,73233,74568,75343,77349,77612,78858,79307,83608,84547,85284,87507,
#Partially deleted in new
chr14	23185335	23272845	chr14:23185335-23272845	0	+	23240345	23272845	789624	6	155,77,101,53,75,23,	0,7989,55009,57920,58986,87487,
#Partially deleted in new
chr14	23185367	23188313	chr14:23185367-23188313	0	+	23185367	23185367	8553170	2	123,229,	0,2717,
#Partially deleted in new
chr14	23229960	23230116	chr14:23229960-23230116	7	-	23229960	23229960	16724991	1	156,	0,
#Partially deleted in new
chr14	23240345	23272891	chr14:23240345-23272891	1	+	23240345	23272891	789624	14	100,53,75,116,61,29,47,43,61,49,40,98,62,69,	0,2910,3976,18203,19538,20313,22319,22582,23828,24277,28578,29517,30254,32477,
#Partially deleted in new
chr14	23258484	23273477	chr14:23258484-23273477	1	+	23258626	23270639	789624	6	180,61,40,73,62,655,	0,5689,10439,11403,12115,14338,
#Partially deleted in new
chr14	23258548	23264671	chr14:23258548-23264671	0	+	23258548	23264671	789624	3	116,61,49,	0,5625,6074,
#Deleted in new
chr14	23259459	23259566	chr14:23259459-23259566	3	-	23259459	23259459	8553170	1	107,	0,
#Partially deleted in new
chr14	23262679	23272911	chr14:23262679-23272911	0	+	23262679	23262679	8553170	6	32,61,49,98,62,89,	0,1494,1943,7183,7920,10143,
#Partially deleted in new
chr14	23262931	23270634	chr14:23262931-23270634	0	+	23262931	23262931	8553170	6	39,61,49,40,98,35,	0,1242,1691,5992,6931,7668,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	23272421	23286117	chr14:23272421-23286117	3	-	23275574	23285952	0	2	4766,205,	0,13491,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	23274055	23299447	chr14:23274055-23299447	1	-	23275574	23293576	0	3	3132,158,47,	0,19475,25345,
#Deleted in new
chr14	23275745	23276945	chr14:23275745-23276945	0	-	23275745	23276945	789624	2	752,220,	0,980,
#Deleted in new
chr14	23284990	23286117	chr14:23284990-23286117	0	-	23284990	23284990	8553170	3	38,320,205,	0,301,922,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	23293851	23295726	chr14:23293851-23295726	7	+	23293851	23293851	16724991	1	1875,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	23294603	23295798	chr14:23294603-23295798	5	+	23294603	23294603	16724991	2	100,611,	0,584,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	23295642	23302848	chr14:23295642-23302848	3	-	23301435	23302576	789624	5	3275,141,107,561,689,	0,3758,5115,5655,6517,
#Partially deleted in new
chr14	23295914	23296867	chr14:23295914-23296867	0	-	23295914	23295914	8553170	2	346,112,	0,841,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	23296034	23301583	chr14:23296034-23301583	0	-	23301435	23301583	789624	4	2788,141,107,186,	0,3366,4723,5363,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	23296376	23301539	chr14:23296376-23301539	0	-	23301435	23301539	789624	5	1905,56,141,107,142,	0,2115,3024,4381,5021,
#Partially deleted in new
chr14	23298251	23301525	chr14:23298251-23301525	0	-	23301435	23301525	789624	3	666,138,128,	0,1149,3146,
#Partially deleted in new
chr14	23298292	23301492	chr14:23298292-23301492	0	-	23301435	23301492	789624	5	625,141,219,107,95,	0,1108,1814,2465,3105,
#Partially deleted in new
chr14	23298292	23301243	chr14:23298292-23301243	0	-	23298292	23298292	8553170	3	255,141,48,	0,1108,2903,
#Partially deleted in new
chr14	23298298	23300940	chr14:23298298-23300940	0	-	23298298	23298298	8553170	3	619,141,834,	0,1102,1808,
#Partially deleted in new
chr14	23298586	23301475	chr14:23298586-23301475	0	-	23301435	23301475	789624	5	331,141,33,107,78,	0,814,1520,2171,2811,
#Partially deleted in new
chr14	23298789	23307922	chr14:23298789-23307922	0	+	23307767	23307922	789624	4	148,149,88,163,	0,674,8402,8970,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	23306761	23311759	chr14:23306761-23311759	3	+	23307767	23308965	0	4	133,88,440,2944,	0,430,998,2054,
#Partially deleted in new
chr14	23306834	23325369	chr14:23306834-23325369	3	+	23307767	23325286	0	9	60,88,440,115,68,107,88,152,123,	0,357,925,15346,16164,16542,17130,17303,18412,
#Partially deleted in new
chr14	23306849	23319816	chr14:23306849-23319816	0	+	23306849	23306849	8553170	4	45,88,440,82,	0,342,910,12885,
#Deleted in new
chr14	23306859	23308830	chr14:23306859-23308830	0	+	23307767	23308830	789624	4	88,88,440,15,	0,332,900,1956,
#Deleted in new
chr14	23306873	23308199	chr14:23306873-23308199	0	+	23307767	23308199	789624	3	68,88,440,	0,318,886,
#Deleted in new
chr14	23306957	23307982	chr14:23306957-23307982	0	+	23307767	23307982	789624	2	322,223,	0,802,
#Partially deleted in new
chr14	23306966	23325329	chr14:23306966-23325329	1	+	23307767	23325286	0	8	313,440,115,68,107,88,152,83,	0,793,15214,16032,16410,16998,17171,18280,
#Partially deleted in new
chr14	23307940	23311144	chr14:23307940-23311144	0	+	23307940	23311098	789624	3	259,117,172,	0,875,3032,
#Partially deleted in new
chr14	23321288	23326185	chr14:23321288-23326185	3	+	23321469	23325286	0	7	532,115,68,107,88,152,939,	0,892,1710,2088,2676,2849,3958,
#Partially deleted in new
chr14	23321456	23326163	chr14:23321456-23326163	1	+	23321469	23324299	0	6	364,115,68,107,88,2026,	0,724,1542,1920,2508,2681,
#Partially deleted in new
chr14	23321542	23325298	chr14:23321542-23325298	1	+	23322213	23325286	789624	6	753,68,107,88,152,52,	0,1456,1834,2422,2595,3704,
#Partially deleted in new
chr14	23321813	23323485	chr14:23321813-23323485	0	+	23321813	23321813	8553170	2	482,487,	0,1185,
#Partially deleted in new
chr14	23322021	23324378	chr14:23322021-23324378	1	+	23322213	23324299	789624	5	274,68,107,88,241,	0,977,1355,1943,2116,
#Partially deleted in new
chr14	23322538	23324217	chr14:23322538-23324217	0	+	23322538	23322538	8553170	5	246,68,107,88,80,	0,460,838,1426,1599,
#Partially deleted in new
chr14	23323262	23324645	chr14:23323262-23324645	0	+	23323262	23323262	8553170	3	221,88,508,	0,702,875,
#Partially deleted in new
chr14	23323444	23325334	chr14:23323444-23325334	0	+	23323444	23324299	789624	4	39,88,191,88,	0,520,693,1802,
#Partially deleted in new
chr14	23346305	23352741	chr14:23346305-23352741	1	-	23346647	23352741	789624	10	631,112,218,106,146,166,155,104,504,96,	0,795,1208,1585,1855,2200,2966,5446,5642,6340,
#Partially deleted in new
chr14	23346313	23352860	chr14:23346313-23352860	0	-	23349291	23352741	789624	9	623,112,218,106,146,166,155,504,215,	0,787,1200,1577,1847,2192,2958,5634,6332,
#Partially deleted in new
chr14	23346313	23352912	chr14:23346313-23352912	3	-	23346647	23352214	789624	10	623,112,272,106,146,166,155,104,504,267,	0,787,1146,1577,1847,2192,2958,5438,5634,6332,
#Partially deleted in new
chr14	23346315	23352908	chr14:23346315-23352908	0	-	23349291	23352741	789624	8	621,112,218,146,41,155,504,263,	0,785,1198,1845,2190,2956,5632,6330,
#Partially deleted in new
chr14	23346317	23352551	chr14:23346317-23352551	0	-	23346317	23346317	8553170	9	619,112,272,106,146,166,155,104,604,	0,783,1142,1573,1843,2188,2954,5434,5630,
#Deleted in new
chr14	23346323	23349762	chr14:23346323-23349762	0	-	23346323	23346323	8553170	6	613,112,218,146,166,491,	0,777,1190,1837,2182,2948,
#Partially deleted in new
chr14	23346647	23352214	chr14:23346647-23352214	1	-	23346647	23352214	789624	9	289,112,218,106,146,166,155,104,267,	0,453,866,1243,1513,1858,2624,5104,5300,
#Deleted in new
chr14	23347158	23348221	chr14:23347158-23348221	0	-	23347558	23348221	789624	3	54,272,61,	0,301,1002,
#Partially deleted in new
chr14	23348626	23352576	chr14:23348626-23352576	0	-	23348626	23348626	8553170	3	800,104,629,	0,3125,3321,
#Partially deleted in new
chr14	23349330	23352885	chr14:23349330-23352885	0	-	23351984	23352741	789624	5	96,104,180,46,240,	0,2421,2617,3075,3315,
#Deleted in new
chr14	23350918	23352043	chr14:23350918-23352043	0	-	23350918	23350918	8553170	3	754,104,96,	0,833,1029,
#Partially deleted in new
chr14	23356401	23365633	chr14:23356401-23365633	3	-	23357225	23365025	789624	6	1259,90,723,141,279,626,	0,2474,2915,3739,4153,8606,
#Partially deleted in new
chr14	23356402	23365633	chr14:23356402-23365633	1	-	23357225	23365025	789624	6	1258,90,378,117,141,626,	0,2473,2914,3520,3738,8605,
#Deleted in new
chr14	23356405	23357003	chr14:23356405-23357003	3	+	23356405	23356405	8553170	2	185,100,	0,498,
#Partially deleted in new
chr14	23356655	23365752	chr14:23356655-23365752	1	-	23357225	23365025	789624	5	1005,90,723,141,745,	0,2220,2661,3485,8352,
#Partially deleted in new
chr14	23372808	23375980	chr14:23372808-23375980	1	+	23372966	23375880	789624	3	167,221,356,	0,367,2816,
#Partially deleted in new
chr14	23372860	23376403	chr14:23372860-23376403	3	+	23373118	23375880	789624	2	536,779,	0,2764,
#Partially deleted in new
chr14	23376772	23379669	chr14:23376772-23379669	1	+	23377251	23379487	8553170	6	35,156,153,93,85,196,	0,449,1576,2258,2526,2701,
#Partially deleted in new
chr14	23376807	23379772	chr14:23376807-23379772	3	+	23377251	23379487	789624	5	570,153,93,85,299,	0,1541,2223,2491,2666,
#Partially deleted in new
chr14	23377035	23379772	chr14:23377035-23379772	1	+	23377251	23379487	789624	6	342,153,201,93,85,299,	0,1313,1633,1995,2263,2438,
#Partially deleted in new
chr14	23377036	23379772	chr14:23377036-23379772	1	+	23377251	23379487	789624	3	341,85,299,	0,2262,2437,
#Partially deleted in new
chr14	23377036	23379772	chr14:23377036-23379772	1	+	23377251	23379487	789624	4	341,93,85,299,	0,1994,2262,2437,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	23377046	23379771	chr14:23377046-23379771	0	+	23377046	23377046	8553170	4	1455,93,85,298,	0,1984,2252,2427,
#Partially deleted in new
chr14	23377062	23379772	chr14:23377062-23379772	1	+	23377251	23379487	789624	5	315,39,93,85,299,	0,1400,1968,2236,2411,
#Partially deleted in new
chr14	23377251	23379487	chr14:23377251-23379487	1	+	23377251	23379487	789624	4	126,153,85,14,	0,1097,2047,2222,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	23377918	23379772	chr14:23377918-23379772	0	+	23377918	23377918	8553170	2	1465,299,	0,1555,
#Partially deleted in new
chr14	23381989	23408277	chr14:23381989-23408277	3	-	23382039	23407223	789624	39	74,135,96,276,126,204,309,125,166,184,197,119,127,390,91,146,177,243,256,137,124,118,88,71,310,171,269,139,104,99,64,93,112,28,157,144,214,33,25,	0,438,1235,2452,2926,3938,4325,5539,5768,6165,6869,7403,7603,8067,10572,10922,11352,11676,12078,14294,14704,14973,15180,15553,16738,18266,18719,20474,20707,21358,21725,22306,22721,23110,23233,23637,25033,25586,26263,
#Partially deleted in new
chr14	23382018	23407592	chr14:23382018-23407592	1	-	23382039	23407223	789624	38	45,135,96,276,126,204,309,125,166,184,197,119,127,390,91,146,177,243,256,137,124,118,88,71,310,171,269,139,104,99,64,93,112,28,157,144,214,17,	0,409,1206,2423,2897,3909,4296,5510,5739,6136,6840,7374,7574,8038,10543,10893,11323,11647,12049,14265,14675,14944,15151,15524,16709,18237,18690,20445,20678,21329,21696,22277,22692,23081,23204,23608,25004,25557,
#Deleted in new
chr14	23388595	23388666	chr14:23388595-23388666	3	-	23388595	23388595	5263520	1	71,	0,
#Partially deleted in new
chr14	23399711	23407616	chr14:23399711-23407616	0	-	23399711	23399711	8553170	13	715,269,139,104,99,64,93,112,28,157,144,214,41,	0,997,2752,2985,3636,4003,4584,4999,5388,5511,5915,7311,7864,
#Partially deleted in new
chr14	23412737	23435718	chr14:23412737-23435718	3	-	23412853	23433732	0	40	134,135,96,276,126,204,309,125,166,184,197,119,127,390,91,146,177,243,256,137,124,118,88,68,310,171,150,119,139,104,99,64,93,109,28,157,144,209,56,99,	0,1021,1269,2257,2643,2891,3266,4130,4415,4765,5472,6439,6745,7107,8220,9442,10809,11169,12031,12544,12957,13226,14039,14502,14847,15762,16217,16491,17037,17822,18163,18680,18847,19023,19741,19901,20346,20794,21456,22882,
#Deleted in new
chr14	23415338	23415686	chr14:23415338-23415686	3	+	23415338	23415338	8553170	2	126,81,	0,267,
#Deleted in new
chr14	23417986	23418063	chr14:23417986-23418063	3	-	23417986	23417986	5263520	1	77,	0,
#Partially deleted in new
chr14	23469687	23478193	chr14:23469687-23478193	1	+	23469715	23478026	789624	11	40,60,72,138,85,53,124,169,157,58,187,	0,354,1218,5483,5870,6038,6341,6551,7512,7815,8319,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	23469688	23471609	chr14:23469688-23471609	0	+	23469688	23469688	8553170	3	39,60,704,	0,353,1217,
#Partially deleted in new
chr14	23469698	23476054	chr14:23469698-23476054	0	+	23469698	23469698	8553170	6	29,60,72,472,53,26,	0,343,1207,5472,6027,6330,
#Deleted in new
chr14	23469698	23470282	chr14:23469698-23470282	0	+	23469698	23469698	8553170	2	29,241,	0,343,
#Partially deleted in new
chr14	23469702	23478823	chr14:23469702-23478823	3	+	23469715	23477568	789624	10	25,60,72,138,85,53,124,169,157,1321,	0,339,1203,5468,5855,6023,6326,6536,7497,7800,
#Partially deleted in new
chr14	23469706	23478804	chr14:23469706-23478804	0	+	23469706	23469706	8553170	7	21,60,72,982,169,157,1302,	0,335,1199,5464,6532,7493,7796,
#Partially deleted in new
chr14	23469743	23476108	chr14:23469743-23476108	0	+	23470908	23476108	789624	6	358,72,138,85,53,80,	0,1162,5427,5814,5982,6285,
#Partially deleted in new
chr14	23469762	23471180	chr14:23469762-23471180	0	+	23469762	23469762	8553170	2	339,275,	0,1143,
#Partially deleted in new
chr14	23470049	23478074	chr14:23470049-23478074	0	+	23470049	23478026	789624	8	52,72,138,124,169,157,58,68,	0,856,5121,5979,6189,7150,7453,7957,
#Partially deleted in new
chr14	23475182	23477538	chr14:23475182-23477538	0	+	23475182	23475182	8553170	6	460,53,124,169,157,36,	0,543,846,1056,2017,2320,
#Partially deleted in new
chr14	23476165	23478178	chr14:23476165-23478178	0	+	23476165	23476165	8553170	4	242,157,58,172,	0,1034,1337,1841,
#Partially deleted in new
chr14	23476344	23478036	chr14:23476344-23478036	0	+	23476344	23476344	8553170	3	63,361,30,	0,855,1662,
#Partially deleted in new
chr14	23477212	23509862	chr14:23477212-23509862	0	+	23477212	23509362	789624	3	144,58,523,	0,290,32127,
#Partially deleted in new
chr14	23511759	23559160	chr14:23511759-23559160	1	+	23511759	23511759	789624	5	102,64,118,181,466,	0,1050,1457,2476,46935,
#Deleted in new
chr14	23512771	23514553	chr14:23512771-23514553	0	+	23512771	23512771	8553170	3	102,118,318,	0,445,1464,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	23512816	23560778	chr14:23512816-23560778	3	+	23512816	23512816	789624	3	57,181,2084,	0,1419,45878,
#Deleted in new
chr14	23513186	23514510	chr14:23513186-23514510	0	+	23513186	23513186	8553170	2	148,275,	0,1049,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	23513348	23544276	chr14:23513348-23544276	0	+	23513348	23513348	8553170	3	1068,97,1359,	0,28810,29569,
#Partially deleted in new
chr14	23520854	23551649	chr14:23520854-23551649	3	-	23521961	23535325	789624	10	2087,3477,127,201,59,75,241,518,2090,307,	0,2348,5992,6749,8855,9265,10626,11712,12430,30488,
#Deleted in new
chr14	23521002	23521848	chr14:23521002-23521848	0	-	23521002	23521002	8553170	2	335,121,	0,725,
#Partially deleted in new
chr14	23529393	23551558	chr14:23529393-23551558	1	-	23531510	23535325	789624	5	375,75,202,1104,216,	0,726,2087,4877,21949,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	23530681	23532367	chr14:23530681-23532367	3	+	23530681	23530681	8553170	1	1686,	0,
#Partially deleted in new
chr14	23534241	23556192	chr14:23534241-23556192	0	-	23534241	23535325	789624	2	1133,470,	0,21481,
#Partially deleted in new
chr14	23534585	23548454	chr14:23534585-23548454	0	-	23534585	23535325	789624	3	789,92,68,	0,3429,13801,
#Partially deleted in new
chr14	23555987	23558909	chr14:23555987-23558909	0	+	23555987	23555987	8553170	2	356,215,	0,2707,
#Partially deleted in new
chr14	23556006	23559574	chr14:23556006-23559574	1	+	23556757	23558840	0	3	337,562,880,	0,736,2688,
#Partially deleted in new
chr14	23556021	23560271	chr14:23556021-23560271	3	+	23556757	23558840	0	2	1283,1577,	0,2673,
#Deleted in new
chr14	23556135	23557125	chr14:23556135-23557125	0	+	23556757	23557125	789624	2	208,373,	0,617,
#Partially deleted in new
chr14	23556270	23558898	chr14:23556270-23558898	1	+	23556757	23558840	789624	3	73,292,204,	0,472,2424,
#Partially deleted in new
chr14	23556270	23558859	chr14:23556270-23558859	1	+	23556757	23558730	0	3	73,297,165,	0,472,2424,
#Partially deleted in new
chr14	23556293	23559543	chr14:23556293-23559543	1	+	23556757	23558730	0	2	746,849,	0,2401,
#Partially deleted in new
chr14	23556998	23558997	chr14:23556998-23558997	0	+	23556998	23558840	789624	2	36,303,	0,1696,
#Partially deleted in new
chr14	23559564	23568070	chr14:23559564-23568070	3	-	23559748	23567314	0	21	286,99,164,136,124,105,128,90,123,55,141,114,56,99,81,96,77,97,142,125,960,	0,373,690,1731,1947,2397,2723,2939,3815,4019,4151,4481,4768,4997,5554,6041,6251,6499,6713,6997,7546,
#Deleted in new
chr14	23559566	23560311	chr14:23559566-23560311	0	-	23559566	23559566	8553170	2	284,374,	0,371,
#Partially deleted in new
chr14	23559567	23567803	chr14:23559567-23567803	1	-	23559748	23567314	0	22	283,99,164,136,124,105,128,90,123,55,141,114,56,99,81,96,77,97,142,125,209,65,	0,370,687,1728,1944,2394,2720,2936,3812,4016,4148,4478,4765,4994,5551,6038,6248,6496,6710,6994,7543,8171,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	23559567	23563949	chr14:23559567-23563949	0	-	23559567	23559567	8553170	7	283,99,164,136,904,1135,234,	0,370,687,1728,1944,2936,4148,
#Partially deleted in new
chr14	23559575	23567465	chr14:23559575-23567465	0	-	23559575	23559575	8553170	20	275,99,164,136,124,105,128,90,123,55,141,114,56,99,81,96,345,142,83,15,	0,362,679,1720,1936,2386,2712,2928,3804,4008,4140,4470,4757,4986,5543,6030,6240,6702,7661,7875,
#Partially deleted in new
chr14	23559607	23567798	chr14:23559607-23567798	0	-	23559607	23559607	8553170	20	243,99,164,136,124,105,128,90,123,55,141,176,56,99,81,96,345,142,209,60,	0,330,647,1688,1904,2354,2680,2896,3772,3976,4108,4438,4725,4954,5511,5998,6208,6670,7503,8131,
#Partially deleted in new
chr14	23559611	23567324	chr14:23559611-23567324	0	-	23559611	23559611	8553170	18	239,99,164,136,124,105,128,90,123,55,506,56,99,81,96,97,142,214,	0,326,643,1684,1900,2350,2676,2892,3768,3972,4104,4721,4950,5507,5994,6452,6666,7499,
#Deleted in new
chr14	23559688	23560452	chr14:23559688-23560452	0	-	23559688	23559688	8553170	3	162,99,198,	0,249,566,
#Partially deleted in new
chr14	23559987	23562406	chr14:23559987-23562406	0	-	23559987	23562406	789624	5	49,164,136,124,119,	0,267,1308,1524,2300,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	23561096	23568073	chr14:23561096-23568073	3	+	23561096	23561096	789624	4	777,114,1967,385,	0,3630,4359,6592,
#Partially deleted in new
chr14	23561318	23563223	chr14:23561318-23563223	0	-	23561318	23561318	8553170	6	113,124,105,128,90,24,	0,193,643,969,1185,1881,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	23561408	23563000	chr14:23561408-23563000	0	-	23561408	23561408	8553170	4	23,124,454,497,	0,103,553,1095,
#Partially deleted in new
chr14	23562186	23563853	chr14:23562186-23563853	0	-	23562186	23562186	8553170	4	229,90,259,138,	0,317,1193,1529,
#Partially deleted in new
chr14	23562368	23563791	chr14:23562368-23563791	0	-	23562368	23562368	8553170	5	47,90,123,26,76,	0,135,1011,1215,1347,
#Deleted in new
chr14	23563095	23563743	chr14:23563095-23563743	0	-	23563095	23563095	8553170	3	187,259,28,	0,284,620,
#Deleted in new
chr14	23563251	23564631	chr14:23563251-23564631	0	-	23563479	23564631	789624	7	31,123,26,141,114,56,70,	0,128,332,464,794,1081,1310,
#Deleted in new
chr14	23563472	23564085	chr14:23563472-23564085	0	-	23563472	23563472	8553170	3	137,141,40,	0,243,573,
#Deleted in new
chr14	23563472	23564091	chr14:23563472-23564091	0	-	23563472	23563472	8553170	3	30,273,46,	0,111,573,
#Deleted in new
chr14	23563476	23564095	chr14:23563476-23564095	0	-	23563476	23563476	8553170	3	162,141,50,	0,239,569,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	23563618	23564799	chr14:23563618-23564799	0	-	23563618	23563618	8553170	5	20,141,114,56,238,	0,97,427,714,943,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	23564034	23564818	chr14:23564034-23564818	0	-	23564034	23564034	8553170	2	187,486,	0,298,
#Partially deleted in new
chr14	23564615	23567834	chr14:23564615-23567834	0	-	23564615	23564615	8553170	8	45,81,96,97,142,125,209,96,	0,503,990,1448,1662,1946,2495,3123,
#Deleted in new
chr14	23564979	23567788	chr14:23564979-23567788	0	-	23564979	23564979	8553170	6	220,555,142,125,209,50,	0,626,1298,1582,2131,2759,
#Deleted in new
chr14	23564982	23567779	chr14:23564982-23567779	0	-	23564982	23564982	8553170	5	719,345,142,209,41,	0,833,1295,2128,2756,
#Deleted in new
chr14	23565120	23567785	chr14:23565120-23567785	0	-	23566416	23567314	789624	7	79,96,77,97,142,209,47,	0,485,695,943,1157,1990,2618,
#Deleted in new
chr14	23565534	23567514	chr14:23565534-23567514	0	-	23565534	23565534	8553170	5	167,345,142,209,64,	0,281,743,1576,1916,
#Deleted in new
chr14	23565552	23567783	chr14:23565552-23567783	0	-	23565552	23565552	8553170	4	608,142,209,45,	0,725,1558,2186,
#Deleted in new
chr14	23565811	23567524	chr14:23565811-23567524	0	-	23565811	23565811	8553170	6	81,97,142,125,209,74,	0,252,466,750,1299,1639,
#Deleted in new
chr14	23565823	23566575	chr14:23565823-23566575	0	-	23565823	23565823	8553170	2	337,298,	0,454,
#Deleted in new
chr14	23565859	23567814	chr14:23565859-23567814	0	-	23565859	23567314	789624	6	33,97,142,125,205,76,	0,204,418,702,1251,1879,
#Deleted in new
chr14	23565871	23567783	chr14:23565871-23567783	0	-	23566416	23567314	789624	5	21,97,142,209,187,	0,192,406,1239,1725,
#Deleted in new
chr14	23565930	23567499	chr14:23565930-23567499	0	-	23565930	23565930	8553170	5	230,142,125,209,49,	0,347,631,1180,1520,
#Deleted in new
chr14	23566338	23567747	chr14:23566338-23567747	0	-	23566338	23567314	789624	4	81,125,205,151,	0,223,772,1258,
#Deleted in new
chr14	23566808	23567788	chr14:23566808-23567788	0	-	23566808	23566808	8553170	2	511,50,	0,930,
#Deleted in new
chr14	23567116	23567513	chr14:23567116-23567513	0	-	23567116	23567116	8553170	2	234,63,	0,334,
#Partially deleted in new
chr14	23568034	23578800	chr14:23568034-23578800	3	-	23569633	23577453	789624	6	1683,533,119,772,550,621,	0,2893,3767,7650,9040,10145,
#Partially deleted in new
chr14	23568034	23577457	chr14:23568034-23577457	1	-	23569633	23577457	789624	6	1683,533,119,772,364,18,	0,2893,3767,7650,9040,9405,
#Partially deleted in new
chr14	23568037	23578785	chr14:23568037-23578785	1	-	23569633	23577453	789624	7	1680,533,119,772,550,126,606,	0,2890,3764,7647,9037,9831,10142,
#Partially deleted in new
chr14	23569414	23573001	chr14:23569414-23573001	1	-	23569633	23572978	789624	4	303,533,119,169,	0,1513,2387,3418,
#Deleted in new
chr14	23574950	23578570	chr14:23574950-23578570	0	-	23574950	23574950	8553170	3	1506,550,391,	0,2124,3229,
#Deleted in new
chr14	23619200	23620012	chr14:23619200-23620012	3	+	23619200	23619200	8553170	1	812,	0,
#Partially deleted in new
chr14	23630114	23644543	chr14:23630114-23644543	0	+	23638864	23644543	789624	7	121,178,178,102,68,52,135,	0,8712,9064,9679,13037,13996,14294,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	23630114	23642438	chr14:23630114-23642438	0	+	23630114	23630114	8553170	5	121,178,178,102,773,	0,8712,9064,9679,11551,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	23636334	23645639	chr14:23636334-23645639	3	+	23638864	23645253	789624	9	438,178,178,102,68,52,135,56,498,	0,2492,2844,3459,6817,7776,8074,8492,8807,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	23636366	23645637	chr14:23636366-23645637	0	+	23636366	23636366	8553170	9	406,178,178,102,1554,52,135,56,496,	0,2460,2812,3427,5299,7744,8042,8460,8775,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	23636372	23645639	chr14:23636372-23645639	1	+	23638864	23645302	789624	9	400,178,178,102,68,52,146,56,498,	0,2454,2806,3421,6779,7738,8036,8454,8769,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	23638031	23645639	chr14:23638031-23645639	0	+	23638031	23638031	8553170	7	973,178,3426,52,135,56,498,	0,1147,1762,6079,6377,6795,7110,
#Partially deleted in new
chr14	23638815	23645637	chr14:23638815-23645637	1	+	23638864	23645302	789624	8	189,178,102,68,52,146,56,496,	0,363,978,4336,5295,5593,6011,6326,
#Partially deleted in new
chr14	23639292	23645639	chr14:23639292-23645639	0	+	23639292	23645253	789624	7	64,102,68,52,87,56,498,	0,501,3859,4818,5116,5534,5849,
#Partially deleted in new
chr14	23639338	23645295	chr14:23639338-23645295	0	+	23639338	23644937	789624	6	18,102,68,52,135,469,	0,455,3813,4772,5070,5488,
#Deleted in new
chr14	23643044	23645639	chr14:23643044-23645639	0	+	23643044	23643044	8553170	1	2595,	0,
#Deleted in new
chr14	23729037	23729741	chr14:23729037-23729741	3	-	23729037	23729037	8553170	2	408,164,	0,540,
#Deleted in new
chr14	23729152	23729697	chr14:23729152-23729697	0	-	23729152	23729152	8553170	1	545,	0,
#Deleted in new
chr14	23749235	23751150	chr14:23749235-23751150	7	+	23749235	23749235	16724991	1	1915,	0,
#Partially deleted in new
chr14	23767661	23768998	chr14:23767661-23768998	7	+	23767661	23767661	16724991	2	213,800,	0,537,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	23791929	23792236	chr14:23791929-23792236	3	+	23791929	23791929	8553170	1	307,	0,
#Partially deleted in new
chr14	23817280	23827396	chr14:23817280-23827396	7	-	23817280	23817280	16724991	4	114,62,102,194,	0,8326,9069,9922,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	23875937	23882428	chr14:23875937-23882428	3	-	23875937	23875937	8553170	3	653,68,88,	0,2729,6403,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	23922246	23934568	chr14:23922246-23934568	3	-	23922246	23922246	8553170	3	340,205,392,	0,11500,11930,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	23938730	23954197	chr14:23938730-23954197	3	-	23938730	23938730	789624	2	2428,424,	0,15043,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	23939612	23954166	chr14:23939612-23954166	1	-	23939612	23939612	8553170	3	1546,260,42,	0,14161,14512,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	23940215	23954122	chr14:23940215-23954122	0	-	23940215	23940215	8553170	2	943,549,	0,13358,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	23940362	23953369	chr14:23940362-23953369	0	-	23940362	23940362	8553170	2	796,61,	0,12946,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	23940685	23988839	chr14:23940685-23988839	0	-	23940685	23940685	8553170	2	473,111,	0,48043,
#Partially deleted in new
chr14	23952989	23953852	chr14:23952989-23953852	0	-	23952989	23952989	8553170	2	430,79,	0,784,
#Partially deleted in new
chr14	23953585	23969274	chr14:23953585-23969274	3	+	23953788	23968871	0	8	331,178,102,71,52,135,56,518,	0,1449,6316,12176,12346,12697,13625,15171,
#Partially deleted in new
chr14	23953733	23969274	chr14:23953733-23969274	1	+	23953788	23968807	0	6	183,178,102,52,56,518,	0,1301,6168,12198,13477,15023,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	23953769	23968123	chr14:23953769-23968123	1	+	23953788	23967270	789624	4	147,178,102,913,	0,1265,6132,13441,
#Partially deleted in new
chr14	23953778	23969009	chr14:23953778-23969009	1	+	23953788	23968871	0	5	138,178,102,56,253,	0,1256,6123,13432,14978,
#Partially deleted in new
chr14	23953785	23969176	chr14:23953785-23969176	1	+	23953788	23968871	0	4	131,178,56,420,	0,1249,13425,14971,
#Partially deleted in new
chr14	23953788	23969279	chr14:23953788-23969279	1	+	23953788	23968871	0	7	128,178,71,52,135,56,523,	0,1246,11973,12143,12494,13422,14968,
#Partially deleted in new
chr14	23953788	23969274	chr14:23953788-23969274	1	+	23953788	23968871	0	6	128,178,71,52,56,518,	0,1246,11973,12143,13422,14968,
#Partially deleted in new
chr14	23966357	23969274	chr14:23966357-23969274	0	+	23966357	23968761	789624	4	60,56,65,518,	0,853,1033,2399,
#Partially deleted in new
chr14	23969873	24006406	chr14:23969873-24006406	1	+	23990356	24004370	789624	6	459,178,102,134,56,521,	0,20308,25158,31510,34463,36012,
#Partially deleted in new
chr14	23969930	24051377	chr14:23969930-24051377	3	+	23969930	23969930	8553170	5	402,265,135,56,524,	0,67812,78746,79354,80923,
#Partially deleted in new
chr14	23970106	24006408	chr14:23970106-24006408	1	+	23990356	24004370	789624	8	226,178,102,71,52,134,56,523,	0,20075,24925,30756,30926,31277,34230,35779,
#Partially deleted in new
chr14	23988817	24006408	chr14:23988817-24006408	1	+	23988947	24006000	789624	5	258,178,102,56,523,	0,1364,6214,15519,17068,
#Partially deleted in new
chr14	23988821	24006408	chr14:23988821-24006408	3	+	23988947	24004370	789624	8	254,178,102,71,52,134,56,523,	0,1360,6210,12041,12211,12562,15515,17064,
#Partially deleted in new
chr14	23988821	24005948	chr14:23988821-24005948	0	+	23988947	24005948	789624	7	254,178,102,71,52,134,63,	0,1360,6210,12041,12211,12562,17064,
#Partially deleted in new
chr14	23988887	24004754	chr14:23988887-24004754	1	+	23988947	24004370	789624	4	188,178,134,418,	0,1294,12496,15449,
#Partially deleted in new
chr14	23988887	24004392	chr14:23988887-24004392	1	+	23988947	24004370	789624	4	188,178,134,56,	0,1294,12496,15449,
#Partially deleted in new
chr14	23990181	24001077	chr14:23990181-24001077	0	+	23995103	24001077	789624	5	178,178,102,71,45,	0,593,4850,10681,10851,
#Partially deleted in new
chr14	23990290	24005915	chr14:23990290-24005915	0	+	23990290	23990290	8553170	5	69,222,134,56,30,	0,10572,11093,14046,15595,
#Partially deleted in new
chr14	23995096	24005948	chr14:23995096-24005948	0	+	23995096	24004370	789624	6	37,71,52,134,56,63,	0,5766,5936,6287,9240,10789,
#Partially deleted in new
chr14	24036452	24051028	chr14:24036452-24051028	7	+	24036452	24036452	16724991	5	176,261,135,56,175,	0,1871,12224,12832,14401,
#Deleted in new
chr14	24036476	24038054	chr14:24036476-24038054	4	+	24036476	24036476	16724991	2	152,312,	0,1266,
#Partially deleted in new
chr14	24036500	24050901	chr14:24036500-24050901	4	+	24036500	24036500	16724991	4	128,261,56,48,	0,1823,12784,14353,
#Partially deleted in new
chr14	24036500	24050968	chr14:24036500-24050968	5	+	24036500	24036500	16724991	8	128,178,33,71,53,135,56,115,	0,1242,6187,11655,11825,12176,12784,14353,
#Partially deleted in new
chr14	24051999	24069728	chr14:24051999-24069728	3	+	24052153	24069404	789624	40	194,95,51,60,116,98,71,74,76,89,95,87,110,78,77,105,70,82,97,55,173,69,94,99,129,114,176,88,138,64,209,101,316,129,67,90,119,181,111,350,	0,1709,2088,2242,2396,2711,3066,3237,3543,3701,4299,4622,4915,5167,5803,5960,6155,6680,6890,7135,7270,7664,7970,8157,8628,8927,9497,10480,10709,11120,11325,12246,12958,13622,14398,14567,16584,16786,17137,17379,
#Partially deleted in new
chr14	24057214	24069726	chr14:24057214-24069726	0	+	24057214	24057214	8553170	24	30,77,119,70,82,97,55,173,69,94,99,1045,88,138,64,209,101,793,67,90,119,181,111,348,	0,588,731,940,1465,1675,1920,2055,2449,2755,2942,3413,5265,5494,5905,6110,7031,7743,9183,9352,11369,11571,11922,12164,
#Partially deleted in new
chr14	24060740	24061930	chr14:24060740-24061930	0	+	24060740	24060740	8553170	3	16,114,434,	0,186,756,
#Partially deleted in new
chr14	24061918	24069724	chr14:24061918-24069724	0	+	24061918	24061918	8553170	11	649,475,209,101,316,67,90,119,181,111,346,	0,790,1406,2327,3039,4479,4648,6665,6867,7218,7460,
#Partially deleted in new
chr14	24070836	24078100	chr14:24070836-24078100	3	+	24072936	24077730	789624	18	192,115,172,180,75,75,84,90,105,87,60,134,55,52,134,237,175,213,	0,690,2096,2662,3214,3454,3694,3869,4335,4668,4990,5312,5523,5669,6042,6317,6756,7051,
#Partially deleted in new
chr14	24070836	24078098	chr14:24070836-24078098	1	+	24070982	24077730	789624	18	192,115,172,180,75,75,84,90,105,87,60,134,55,52,134,237,175,211,	0,690,2096,2662,3214,3454,3694,3869,4335,4668,4990,5312,5523,5669,6042,6317,6756,7051,
#Partially deleted in new
chr14	24070847	24074125	chr14:24070847-24074125	0	+	24072936	24074125	789624	5	191,115,172,180,75,	0,679,2085,2651,3203,
#Partially deleted in new
chr14	24070896	24074095	chr14:24070896-24074095	0	+	24072936	24074095	789624	5	79,115,172,180,45,	0,630,2036,2602,3154,
#Partially deleted in new
chr14	24070948	24078086	chr14:24070948-24078086	0	+	24070948	24070948	8553170	16	693,172,180,315,84,90,105,87,60,134,55,52,134,237,175,199,	0,1984,2550,3102,3582,3757,4223,4556,4878,5200,5411,5557,5930,6205,6644,6939,
#Partially deleted in new
chr14	24071016	24073647	chr14:24071016-24073647	0	+	24072936	24073647	789624	4	120,102,172,149,	0,523,1916,2482,
#Partially deleted in new
chr14	24071089	24074314	chr14:24071089-24074314	0	+	24072936	24074314	789624	6	47,115,216,180,75,24,	0,437,1799,2409,2961,3201,
#Partially deleted in new
chr14	24071186	24073094	chr14:24071186-24073094	0	+	24072936	24073094	789624	3	249,42,162,	0,413,1746,
#Partially deleted in new
chr14	24071359	24075177	chr14:24071359-24075177	0	+	24072936	24075177	789624	8	282,172,180,75,75,84,90,6,	0,1573,2139,2691,2931,3171,3346,3812,
#Partially deleted in new
chr14	24071521	24074726	chr14:24071521-24074726	0	+	24074557	24074726	789624	6	120,180,110,75,84,21,	0,1977,2529,2769,3009,3184,
#Partially deleted in new
chr14	24071524	24074301	chr14:24071524-24074301	0	+	24071524	24071524	8553170	3	117,180,251,	0,1974,2526,
#Partially deleted in new
chr14	24071531	24074311	chr14:24071531-24074311	0	+	24072936	24074311	789624	5	110,187,180,75,21,	0,1401,1967,2519,2759,
#Partially deleted in new
chr14	24071531	24074582	chr14:24071531-24074582	0	+	24072936	24074582	789624	5	110,172,180,75,52,	0,1401,1967,2519,2999,
#Partially deleted in new
chr14	24071549	24074311	chr14:24071549-24074311	0	+	24072936	24074311	789624	5	92,172,180,110,21,	0,1383,1949,2501,2741,
#Partially deleted in new
chr14	24071561	24075511	chr14:24071561-24075511	0	+	24072936	24073563	789624	7	80,172,145,315,84,90,340,	0,1371,1972,2489,2969,3144,3610,
#Partially deleted in new
chr14	24071580	24075584	chr14:24071580-24075584	0	+	24074557	24075584	789624	7	61,75,75,84,90,105,80,	0,2470,2710,2950,3125,3591,3924,
#Partially deleted in new
chr14	24071588	24078086	chr14:24071588-24078086	0	+	24071588	24071588	8553170	9	1516,180,745,715,266,507,237,175,199,	0,1910,2462,3583,4560,4917,5565,6004,6299,
#Partially deleted in new
chr14	24075557	24078087	chr14:24075557-24078087	0	+	24075557	24075557	8553170	3	1124,134,934,	0,1321,1596,
#Partially deleted in new
chr14	24075830	24076840	chr14:24075830-24076840	0	+	24075830	24075830	8553170	4	56,134,55,335,	0,318,529,675,
#Partially deleted in new
chr14	24080106	24084625	chr14:24080106-24084625	1	-	24081235	24082848	789624	3	1462,408,106,	0,2361,4413,
#Partially deleted in new
chr14	24080166	24115014	chr14:24080166-24115014	3	-	24081235	24082848	789624	3	1402,408,293,	0,2301,34555,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	24080876	24095130	chr14:24080876-24095130	1	-	24081235	24082848	789624	4	692,408,324,93,	0,1591,12308,14161,
#Partially deleted in new
chr14	24080999	24081986	chr14:24080999-24081986	1	-	24081235	24081532	789624	2	569,219,	0,768,
#Partially deleted in new
chr14	24081007	24081928	chr14:24081007-24081928	1	-	24081235	24081532	789624	2	561,249,	0,672,
#Partially deleted in new
chr14	24082653	24115010	chr14:24082653-24115010	0	-	24082653	24082848	789624	3	222,226,289,	0,1866,32068,
#Partially deleted in new
chr14	24094052	24104125	chr14:24094052-24104125	1	+	24094068	24103867	789624	10	81,246,185,204,188,163,219,138,96,284,	0,2839,4150,4422,4996,5505,5942,8700,9107,9789,
#Partially deleted in new
chr14	24094137	24104130	chr14:24094137-24104130	3	+	24094405	24103964	789624	10	297,246,185,204,188,163,219,138,96,621,	0,2754,4065,4337,4911,5420,5857,8615,9022,9372,
#Partially deleted in new
chr14	24094149	24099125	chr14:24094149-24099125	0	+	24098329	24099125	789624	6	105,80,246,185,204,77,	0,616,2742,4053,4325,4899,
#Partially deleted in new
chr14	24094158	24100562	chr14:24094158-24100562	1	+	24094405	24100305	789624	7	276,246,185,204,188,163,568,	0,2733,4044,4316,4890,5399,5836,
#Partially deleted in new
chr14	24094193	24099108	chr14:24094193-24099108	0	+	24098329	24099108	789624	5	61,246,185,204,60,	0,2698,4009,4281,4855,
#Partially deleted in new
chr14	24094280	24098591	chr14:24094280-24098591	0	+	24094405	24096911	789624	5	154,80,246,185,117,	0,485,2611,3922,4194,
#Partially deleted in new
chr14	24094300	24104030	chr14:24094300-24104030	1	+	24098329	24103964	789624	10	545,246,185,204,188,163,219,138,96,521,	0,2591,3902,4174,4748,5257,5694,8452,8859,9209,
#Partially deleted in new
chr14	24094310	24100243	chr14:24094310-24100243	0	+	24094310	24094310	8553170	5	535,246,185,204,686,	0,2581,3892,4164,5247,
#Partially deleted in new
chr14	24094310	24104124	chr14:24094310-24104124	1	+	24098329	24103964	789624	10	124,80,185,204,188,163,219,138,96,615,	0,455,3892,4164,4738,5247,5684,8442,8849,9199,
#Partially deleted in new
chr14	24094312	24100303	chr14:24094312-24100303	0	+	24094312	24094312	8553170	5	533,246,476,188,746,	0,2579,3890,4736,5245,
#Partially deleted in new
chr14	24094349	24097063	chr14:24094349-24097063	0	+	24094349	24094349	8553170	2	387,172,	0,2542,
#Partially deleted in new
chr14	24094356	24098228	chr14:24094356-24098228	0	+	24094405	24095222	789624	5	78,80,236,246,26,	0,409,786,2535,3846,
#Partially deleted in new
chr14	24094376	24104130	chr14:24094376-24104130	1	+	24098329	24103964	789624	9	469,246,185,204,188,163,219,138,621,	0,2515,3826,4098,4672,5181,5618,8376,9133,
#Partially deleted in new
chr14	24098511	24102830	chr14:24098511-24102830	0	+	24098511	24099558	789624	5	167,199,163,219,78,	0,537,1046,1483,4241,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	24100148	24110598	chr14:24100148-24110598	0	+	24100148	24110418	789624	3	65,138,305,	0,2604,10145,
#Partially deleted in new
chr14	24102674	24103722	chr14:24102674-24103722	0	+	24102674	24102674	8553170	3	216,96,213,	0,485,835,
#Partially deleted in new
chr14	24114194	24117306	chr14:24114194-24117306	0	+	24115594	24117306	789624	7	146,228,88,11,207,128,41,	0,502,1011,1187,1348,2722,3071,
#Partially deleted in new
chr14	24114626	24124029	chr14:24114626-24124029	1	+	24115594	24123309	789624	15	298,207,128,128,65,101,147,55,69,58,186,154,153,107,855,	0,916,2290,2639,3041,3428,3761,4123,4518,4932,5084,6211,6738,8344,8548,
#Partially deleted in new
chr14	24114626	24117011	chr14:24114626-24117011	0	+	24114626	24114626	8553170	3	298,184,95,	0,916,2290,
#Partially deleted in new
chr14	24114776	24117345	chr14:24114776-24117345	0	+	24114776	24114776	8553170	4	148,212,128,80,	0,738,2140,2489,
#Partially deleted in new
chr14	24114776	24117349	chr14:24114776-24117349	0	+	24115594	24117349	789624	5	517,11,207,128,84,	0,605,766,2140,2489,
#Partially deleted in new
chr14	24114776	24116981	chr14:24114776-24116981	0	+	24115594	24116981	789624	3	148,368,65,	0,605,2140,
#Partially deleted in new
chr14	24114776	24118436	chr14:24114776-24118436	0	+	24115594	24118436	789624	7	148,184,73,128,65,101,49,	0,766,2195,2489,2891,3278,3611,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr14	24114779	24125240	chr14:24114779-24125240	3	+	24115594	24123309	789624	15	514,368,128,128,65,101,147,55,69,58,186,154,153,107,2066,	0,602,2137,2486,2888,3275,3608,3970,4365,4779,4931,6058,6585,8191,8395,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	24114790	24125242	chr14:24114790-24125242	0	+	24115594	24117000	789624	14	503,345,128,128,101,147,55,69,58,186,154,153,107,2068,	0,591,2126,2475,3264,3597,3959,4354,4768,4920,6047,6574,8180,8384,
#Partially deleted in new
chr14	24114801	24116986	chr14:24114801-24116986	0	+	24115594	24116986	789624	5	123,88,11,184,70,	0,404,580,741,2115,
#Partially deleted in new
chr14	24114809	24117682	chr14:24114809-24117682	0	+	24115594	24117682	789624	5	115,212,73,128,15,	0,705,2162,2456,2858,
#Partially deleted in new
chr14	24114809	24118134	chr14:24114809-24118134	0	+	24115594	24118134	789624	5	115,207,73,128,80,	0,733,2162,2456,3245,
#Partially deleted in new
chr14	24114811	24117393	chr14:24114811-24117393	0	+	24115594	24117393	789624	4	113,235,73,128,	0,703,2160,2454,
#Partially deleted in new
chr14	24114860	24117718	chr14:24114860-24117718	0	+	24115594	24117718	789624	5	109,184,73,128,51,	0,682,2111,2405,2807,
#Partially deleted in new
chr14	24115175	24115685	chr14:24115175-24115685	0	+	24115594	24115685	789624	3	118,11,171,	0,206,339,
#Partially deleted in new
chr14	24115185	24117686	chr14:24115185-24117686	0	+	24115594	24117000	789624	6	108,11,184,128,128,19,	0,196,357,1731,2080,2482,
#Partially deleted in new
chr14	24115187	24117706	chr14:24115187-24117706	0	+	24115594	24117281	789624	4	106,368,128,39,	0,194,2078,2480,
#Partially deleted in new
chr14	24115206	24117409	chr14:24115206-24117409	0	+	24115206	24115206	8553170	5	87,11,207,73,144,	0,175,336,1765,2059,
#Partially deleted in new
chr14	24115207	24118523	chr14:24115207-24118523	0	+	24115207	24115207	8553170	3	86,368,136,	0,174,3180,
#Partially deleted in new
chr14	24115208	24118116	chr14:24115208-24118116	0	+	24115594	24117281	789624	5	85,207,128,65,62,	0,334,2057,2459,2846,
#Partially deleted in new
chr14	24115224	24118105	chr14:24115224-24118105	0	+	24115594	24118105	789624	7	69,11,184,73,128,65,51,	0,157,318,1747,2041,2443,2830,
#Partially deleted in new
chr14	24115237	24117718	chr14:24115237-24117718	0	+	24115594	24117718	789624	5	56,207,128,128,51,	0,305,1679,2028,2430,
#Partially deleted in new
chr14	24115245	24117351	chr14:24115245-24117351	0	+	24115594	24117351	789624	4	48,368,73,86,	0,136,1726,2020,
#Partially deleted in new
chr14	24115274	24124029	chr14:24115274-24124029	0	+	24115594	24117000	789624	15	19,345,128,128,65,101,147,55,69,58,186,154,153,107,855,	0,107,1642,1991,2393,2780,3113,3475,3870,4284,4436,5563,6090,7696,7900,
#Partially deleted in new
chr14	24115274	24117044	chr14:24115274-24117044	0	+	24115274	24115274	8553170	3	19,368,57,	0,107,1713,
#Partially deleted in new
chr14	24115282	24117041	chr14:24115282-24117041	0	+	24115594	24117041	789624	2	467,125,	0,1634,
#Partially deleted in new
chr14	24115314	24117701	chr14:24115314-24117701	0	+	24115594	24117000	789624	5	78,184,128,128,34,	0,228,1602,1951,2353,
#Partially deleted in new
chr14	24115317	24117330	chr14:24115317-24117330	0	+	24115594	24117330	789624	3	409,73,65,	0,1654,1948,
#Partially deleted in new
chr14	24115325	24124029	chr14:24115325-24124029	1	+	24115594	24123309	789624	15	67,184,73,128,65,101,147,55,69,58,186,154,153,107,855,	0,217,1646,1940,2342,2729,3062,3424,3819,4233,4385,5512,6039,7645,7849,
#Partially deleted in new
chr14	24115325	24123796	chr14:24115325-24123796	0	+	24115594	24117725	789624	14	424,73,128,65,101,147,55,69,58,186,154,153,107,622,	0,1646,1940,2342,2729,3062,3424,3819,4233,4385,5512,6039,7645,7849,
#Partially deleted in new
chr14	24115325	24117684	chr14:24115325-24117684	0	+	24115594	24117684	789624	5	67,235,128,128,17,	0,189,1591,1940,2342,
#Partially deleted in new
chr14	24115325	24117355	chr14:24115325-24117355	0	+	24115594	24117355	789624	3	424,73,90,	0,1646,1940,
#Partially deleted in new
chr14	24115327	24118098	chr14:24115327-24118098	0	+	24115594	24117281	789624	4	422,128,65,44,	0,1938,2340,2727,
#Partially deleted in new
chr14	24115373	24123981	chr14:24115373-24123981	1	+	24116996	24123309	789624	13	376,128,128,101,147,55,69,58,186,154,153,107,807,	0,1543,1892,2681,3014,3376,3771,4185,4337,5464,5991,7597,7801,
#Partially deleted in new
chr14	24117333	24119402	chr14:24117333-24119402	0	+	24117333	24117333	8553170	6	60,65,101,147,55,258,	0,334,721,1054,1416,1811,
#Partially deleted in new
chr14	24118542	24124030	chr14:24118542-24124030	0	+	24118542	24118542	8553170	5	1074,186,154,153,1060,	0,1168,2295,2822,4428,
#Partially deleted in new
chr14	24119145	24123362	chr14:24119145-24123362	0	+	24119145	24123149	789624	6	68,58,186,154,153,392,	0,413,565,1692,2219,3825,
#Partially deleted in new
chr14	24120955	24131829	chr14:24120955-24131829	3	+	24120955	24131829	789624	4	36,153,107,554,	0,409,2015,10320,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	24120958	24122174	chr14:24120958-24122174	0	+	24120958	24120958	8553170	2	33,810,	0,406,
#Deleted in new
chr14	24131274	24132849	chr14:24131274-24132849	3	+	24131563	24132823	789624	2	555,639,	0,936,
#Deleted in new
chr14	24132049	24132849	chr14:24132049-24132849	1	+	24132532	24132823	789624	1	800,	0,
#Deleted in new
chr14	24136157	24138967	chr14:24136157-24138967	3	+	24136262	24138816	0	11	144,33,63,111,46,98,69,68,55,87,232,	0,827,985,1163,1362,1542,1891,2038,2187,2316,2578,
#Deleted in new
chr14	24136162	24138959	chr14:24136162-24138959	1	+	24138213	24138816	789624	11	179,33,63,111,46,98,69,68,55,87,224,	0,822,980,1158,1357,1537,1886,2033,2182,2311,2573,
#Deleted in new
chr14	24136196	24138299	chr14:24136196-24138299	0	+	24136196	24136196	8553170	5	105,447,46,98,251,	0,788,1323,1503,1852,
#Deleted in new
chr14	24136196	24138787	chr14:24136196-24138787	0	+	24136196	24136196	8553170	10	105,33,63,111,46,98,215,55,87,52,	0,788,946,1124,1323,1503,1852,2148,2277,2539,
#Deleted in new
chr14	24136199	24138964	chr14:24136199-24138964	1	+	24136262	24138644	0	10	102,33,63,111,46,98,69,68,55,491,	0,785,943,1121,1320,1500,1849,1996,2145,2274,
#Deleted in new
chr14	24136226	24138967	chr14:24136226-24138967	1	+	24136262	24138760	0	11	75,33,63,111,46,98,69,68,55,95,232,	0,758,916,1094,1293,1473,1822,1969,2118,2247,2509,
#Deleted in new
chr14	24136227	24137761	chr14:24136227-24137761	0	+	24136227	24136227	8553170	6	74,120,63,111,46,62,	0,670,915,1093,1292,1472,
#Deleted in new
chr14	24137397	24138959	chr14:24137397-24138959	0	+	24137397	24137397	8553170	7	34,46,98,215,59,87,224,	0,122,302,651,947,1076,1338,
#Deleted in new
chr14	24137519	24138959	chr14:24137519-24138959	0	+	24137519	24138478	789624	7	46,98,69,68,59,87,224,	0,180,529,676,825,954,1216,
#Deleted in new
chr14	24137519	24138904	chr14:24137519-24138904	0	+	24137519	24137519	8553170	4	46,98,69,709,	0,180,529,676,
#Deleted in new
chr14	24138958	24139523	chr14:24138958-24139523	0	-	24138958	24138958	8553170	1	565,	0,
#Partially deleted in new
chr14	24138964	24141588	chr14:24138964-24141588	3	-	24139009	24141304	789624	6	232,95,70,77,210,151,	0,395,580,1924,2142,2473,
#Partially deleted in new
chr14	24138964	24141585	chr14:24138964-24141585	1	-	24139009	24141304	789624	5	232,95,70,77,479,	0,395,580,1924,2142,
#Partially deleted in new
chr14	24138964	24141570	chr14:24138964-24141570	1	-	24139009	24139667	789624	5	232,95,245,77,223,	0,395,580,1924,2383,
#Partially deleted in new
chr14	24139129	24141487	chr14:24139129-24141487	0	-	24139806	24141304	789624	6	67,95,272,77,210,50,	0,230,415,1759,1977,2308,
#Deleted in new
chr14	24139388	24140008	chr14:24139388-24140008	0	-	24139388	24139388	8553170	2	66,464,	0,156,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	24139444	24140444	chr14:24139444-24140444	3	+	24139444	24139444	8553170	2	32,715,	0,285,
#Partially deleted in new
chr14	24139544	24141553	chr14:24139544-24141553	0	-	24139544	24139544	8553170	3	245,77,447,	0,1344,1562,
#Deleted in new
chr14	24143361	24143952	chr14:24143361-24143952	0	-	24143361	24143361	8553170	2	128,368,	0,223,
#Deleted in new
chr14	24143364	24147221	chr14:24143364-24147221	3	-	24143408	24146581	789624	11	125,87,55,68,69,98,31,87,63,33,688,	0,220,610,827,1035,1693,1878,2014,2345,2843,3169,
#Deleted in new
chr14	24143364	24146605	chr14:24143364-24146605	1	-	24143408	24146581	789624	10	125,87,55,68,69,98,31,87,63,72,	0,220,610,827,1035,1693,1878,2014,2345,3169,
#Deleted in new
chr14	24143364	24146646	chr14:24143364-24146646	1	-	24143408	24146581	789624	11	125,87,55,68,69,127,47,87,63,33,113,	0,220,610,827,1035,1693,1862,2014,2345,2843,3169,
#Deleted in new
chr14	24143365	24146579	chr14:24143365-24146579	0	-	24143365	24143365	8553170	10	124,87,68,69,98,31,87,63,33,46,	0,219,826,1034,1692,1877,2013,2344,2842,3168,
#Deleted in new
chr14	24143366	24144009	chr14:24143366-24144009	0	-	24143366	24143366	8553170	1	643,	0,
#Deleted in new
chr14	24143381	24146238	chr14:24143381-24146238	0	-	24143381	24143381	8553170	8	108,87,55,68,756,31,87,529,	0,203,593,810,1018,1861,1997,2328,
#Deleted in new
chr14	24143404	24147235	chr14:24143404-24147235	0	-	24145857	24146581	789624	11	85,87,55,68,69,98,31,87,187,33,702,	0,180,570,787,995,1653,1838,1974,2305,2803,3129,
#Deleted in new
chr14	24143406	24147258	chr14:24143406-24147258	0	-	24143406	24143406	8553170	7	83,87,55,68,874,862,725,	0,178,568,785,993,1972,3127,
#Deleted in new
chr14	24143488	24143565	chr14:24143488-24143565	3	-	24143488	24143488	789624	1	77,	0,
#Deleted in new
chr14	24143593	24146591	chr14:24143593-24146591	0	-	24145442	24146581	789624	10	78,55,68,69,98,31,87,43,33,58,	0,381,598,806,1464,1649,1785,2116,2614,2940,
#Deleted in new
chr14	24144033	24144657	chr14:24144033-24144657	0	-	24144033	24144033	8553170	2	226,258,	0,366,
#Deleted in new
chr14	24144202	24146314	chr14:24144202-24146314	0	-	24144202	24145273	789624	7	57,69,98,31,87,63,107,	0,197,855,1040,1176,1507,2005,
#Deleted in new
chr14	24144799	24146578	chr14:24144799-24146578	0	-	24144799	24144799	8553170	5	474,87,63,33,45,	0,579,910,1408,1734,
#Deleted in new
chr14	24145133	24146621	chr14:24145133-24146621	0	-	24145133	24145133	8553170	3	639,33,88,	0,1074,1400,
#Deleted in new
chr14	24145169	24146596	chr14:24145169-24146596	0	-	24145169	24145169	8553170	4	104,87,531,63,	0,209,540,1364,
#Deleted in new
chr14	24145740	24146629	chr14:24145740-24146629	0	-	24145740	24145740	8553170	3	171,33,96,	0,467,793,
#Deleted in new
chr14	24145857	24146646	chr14:24145857-24146646	1	-	24145857	24146581	789624	3	39,33,113,	0,350,676,
#Deleted in new
chr14	24146682	24147867	chr14:24146682-24147867	0	+	24147698	24147867	789624	2	135,415,	0,770,
#Partially deleted in new
chr14	24146684	24149487	chr14:24146684-24149487	0	+	24148800	24149487	789624	6	38,147,156,60,76,82,	0,1291,1573,1957,2116,2721,
#Deleted in new
chr14	24146685	24148684	chr14:24146685-24148684	0	+	24146685	24146685	8553170	5	132,59,147,156,43,	0,1146,1290,1572,1956,
#Partially deleted in new
chr14	24146721	24149385	chr14:24146721-24149385	0	+	24146721	24146721	8553170	6	96,147,156,60,76,39,	0,1254,1536,1920,2079,2625,
#Partially deleted in new
chr14	24146739	24150254	chr14:24146739-24150254	0	+	24148800	24150254	789624	7	78,147,156,60,76,178,194,	0,1236,1518,1902,2061,2666,3321,
#Deleted in new
chr14	24146750	24148656	chr14:24146750-24148656	0	+	24147698	24148656	789624	5	67,193,147,156,15,	0,947,1225,1507,1891,
#Deleted in new
chr14	24146809	24147570	chr14:24146809-24147570	0	-	24146809	24146809	8553170	2	412,48,	0,713,
#Partially deleted in new
chr14	24146874	24149431	chr14:24146874-24149431	0	+	24146874	24146874	8553170	6	33,147,156,60,76,85,	0,1101,1383,1767,1926,2472,
#Partially deleted in new
chr14	24146876	24149511	chr14:24146876-24149511	0	+	24148800	24149511	789624	6	31,147,156,60,76,106,	0,1099,1381,1765,1924,2529,
#Partially deleted in new
chr14	24146886	24160659	chr14:24146886-24160659	1	+	24148435	24160573	0	21	21,147,220,60,76,178,388,291,249,186,207,174,99,90,115,119,114,58,97,169,140,	0,1089,1371,1755,1914,2519,3174,3711,4244,4598,4899,8270,8527,8716,10403,10633,11011,11255,12977,13352,13633,
#Partially deleted in new
chr14	24147378	24160661	chr14:24147378-24160661	3	+	24147698	24160573	0	21	512,147,156,60,76,178,388,291,249,186,207,174,99,90,115,119,114,58,97,169,142,	0,597,879,1263,1422,2027,2682,3219,3752,4106,4407,7778,8035,8224,9911,10141,10519,10763,12485,12860,13141,
#Partially deleted in new
chr14	24147499	24160660	chr14:24147499-24160660	0	+	24147698	24151900	789624	14	391,23,33,207,174,99,90,89,119,114,58,97,169,141,	0,476,4138,4286,7657,7914,8103,9816,10020,10398,10642,12364,12739,13020,
#Partially deleted in new
chr14	24147499	24149425	chr14:24147499-24149425	0	+	24148800	24149425	789624	6	92,147,156,60,76,20,	0,476,758,1142,1301,1906,
#Deleted in new
chr14	24147499	24148334	chr14:24147499-24148334	0	+	24147499	24147499	8553170	3	391,86,77,	0,476,758,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	24147715	24149150	chr14:24147715-24149150	0	+	24147715	24147715	8553170	5	175,147,156,60,350,	0,260,542,926,1085,
#Partially deleted in new
chr14	24147975	24150291	chr14:24147975-24150291	0	+	24147975	24149496	789624	6	147,156,60,76,107,231,	0,282,666,825,1501,2085,
#Partially deleted in new
chr14	24148081	24160654	chr14:24148081-24160654	0	+	24148081	24160573	789624	20	41,156,60,76,178,388,291,81,186,207,174,99,90,115,119,114,58,97,169,135,	0,176,560,719,1324,1979,2516,3217,3403,3704,7075,7332,7521,9208,9438,9816,10060,11782,12157,12438,
#Partially deleted in new
chr14	24148447	24150247	chr14:24148447-24150247	0	+	24148447	24148447	8553170	5	30,60,76,178,187,	0,194,353,958,1613,
#Partially deleted in new
chr14	24151000	24160655	chr14:24151000-24160655	0	+	24151000	24151000	8553170	13	379,186,207,174,99,90,115,119,114,58,97,169,136,	0,484,785,4156,4413,4602,6289,6519,6897,7141,8863,9238,9519,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr14	24151217	24167402	chr14:24151217-24167402	3	+	24151217	24160573	789624	21	162,186,207,174,99,90,115,119,114,58,97,169,819,181,184,131,82,72,342,116,1281,	0,267,568,3939,4196,4385,6072,6302,6680,6924,8646,9021,9302,10926,11748,12160,12660,12845,13396,14629,14904,
#Partially deleted in new
chr14	24154959	24157335	chr14:24154959-24157335	0	+	24155156	24157335	789624	4	371,99,90,46,	0,454,643,2330,
#Partially deleted in new
chr14	24155621	24157908	chr14:24155621-24157908	0	+	24155621	24155621	8553170	3	71,115,389,	0,1668,1898,
#Partially deleted in new
chr14	24155666	24160654	chr14:24155666-24160654	0	+	24155666	24159878	789624	8	26,115,119,114,33,97,169,135,	0,1623,1853,2231,2500,4197,4572,4853,
#Partially deleted in new
chr14	24157290	24160605	chr14:24157290-24160605	0	+	24157290	24160264	789624	6	114,119,114,58,169,86,	0,229,607,851,2948,3229,
#Partially deleted in new
chr14	24157519	24160655	chr14:24157519-24160655	0	+	24157519	24160573	789624	5	119,58,97,169,136,	0,622,2344,2719,3000,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	24158602	24158722	chr14:24158602-24158722	7	+	24158602	24158602	16724991	1	120,	0,
#Deleted in new
chr14	24159787	24160655	chr14:24159787-24160655	0	+	24159787	24159787	8553170	3	173,169,136,	0,451,732,
#Deleted in new
chr14	24160110	24160542	chr14:24160110-24160542	0	+	24160110	24160110	8553170	2	297,23,	0,409,
#Partially deleted in new
chr14	24161052	24166565	chr14:24161052-24166565	3	+	24162144	24166196	789624	9	286,181,184,131,82,72,342,116,444,	0,1091,1913,2325,2825,3010,3561,4794,5069,
#Partially deleted in new
chr14	24161272	24166392	chr14:24161272-24166392	1	+	24163091	24166255	789624	9	66,184,131,82,72,342,127,116,271,	0,1693,2105,2605,2790,3341,3784,4574,4849,
#Partially deleted in new
chr14	24161276	24165902	chr14:24161276-24165902	0	+	24162144	24162982	789624	8	62,137,184,131,82,72,342,56,	0,867,1689,2101,2601,2786,3337,4570,
#Partially deleted in new
chr14	24161289	24163586	chr14:24161289-24163586	0	+	24161289	24161289	8553170	4	49,181,184,209,	0,854,1676,2088,
#Partially deleted in new
chr14	24161289	24163281	chr14:24161289-24163281	0	+	24161289	24161289	8553170	3	49,181,316,	0,854,1676,
#Partially deleted in new
chr14	24161289	24166254	chr14:24161289-24166254	0	+	24161289	24161289	8553170	8	49,181,184,131,82,893,116,133,	0,854,1676,2088,2588,2773,4557,4832,
#Partially deleted in new
chr14	24161292	24164103	chr14:24161292-24164103	0	+	24162144	24164103	789624	5	46,181,184,131,41,	0,851,1673,2085,2770,
#Partially deleted in new
chr14	24161300	24164739	chr14:24161300-24164739	0	+	24162144	24164739	789624	7	38,181,184,131,82,72,153,	0,843,1665,2077,2577,2762,3286,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	24161303	24162716	chr14:24161303-24162716	0	+	24161303	24161303	8553170	2	35,573,	0,840,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	24161316	24163765	chr14:24161316-24163765	0	+	24162144	24162982	789624	4	22,137,184,388,	0,827,1649,2061,
#Partially deleted in new
chr14	24162995	24166224	chr14:24162995-24166224	0	+	24162995	24166196	789624	6	154,131,82,72,116,103,	0,382,882,1067,2851,3126,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	24163611	24164287	chr14:24163611-24164287	0	+	24163611	24163611	8553170	2	348,225,	0,451,
#Deleted in new
chr14	24163874	24164920	chr14:24163874-24164920	0	+	24163874	24163874	8553170	2	260,307,	0,739,
#Deleted in new
chr14	24164529	24165449	chr14:24164529-24165449	0	+	24164529	24164529	8553170	2	426,393,	0,527,
#Deleted in new
chr14	24165758	24166565	chr14:24165758-24166565	0	+	24165758	24165758	8553170	2	204,444,	0,363,
#Partially deleted in new
chr14	24171852	24180257	chr14:24171852-24180257	3	+	24172552	24180095	789624	20	513,142,69,143,73,121,82,80,82,31,77,50,132,67,140,49,67,132,107,248,	0,614,860,1046,1273,1438,3690,4969,5288,5500,5612,5856,6238,6753,6924,7232,7544,7742,7947,8157,
#Deleted in new
chr14	24172014	24172996	chr14:24172014-24172996	0	+	24172552	24172996	789624	4	351,117,69,98,	0,477,698,884,
#Partially deleted in new
chr14	24172024	24180254	chr14:24172024-24180254	1	+	24172552	24180095	789624	19	584,69,143,73,121,82,80,82,31,77,50,132,67,140,49,67,132,107,245,	0,688,874,1101,1266,3518,4797,5116,5328,5440,5684,6066,6581,6752,7060,7372,7570,7775,7985,
#Partially deleted in new
chr14	24172134	24180254	chr14:24172134-24180254	0	+	24172134	24172134	8553170	17	474,69,143,73,121,82,80,82,31,758,67,140,49,67,132,107,245,	0,578,764,991,1156,3408,4687,5006,5218,5330,6471,6642,6950,7262,7460,7665,7875,
#Deleted in new
chr14	24172281	24173163	chr14:24172281-24173163	0	+	24172281	24172281	8553170	3	327,69,265,	0,431,617,
#Partially deleted in new
chr14	24172610	24176884	chr14:24172610-24176884	0	+	24173184	24176884	789624	6	171,143,73,121,82,63,	0,288,515,680,2932,4211,
#Partially deleted in new
chr14	24172748	24177750	chr14:24172748-24177750	0	+	24172748	24172748	8553170	7	33,300,121,82,80,82,398,	0,150,542,2794,4073,4392,4604,
#Partially deleted in new
chr14	24175317	24177918	chr14:24175317-24177918	0	+	24175317	24175317	8553170	4	307,80,82,566,	0,1504,1823,2035,
#Deleted in new
chr14	24177509	24178100	chr14:24177509-24178100	0	+	24177509	24177509	8553170	2	32,392,	0,199,
#Deleted in new
chr14	24178125	24180254	chr14:24178125-24180254	0	+	24178125	24180254	789624	7	97,67,140,49,67,132,455,	0,480,651,959,1271,1469,1674,
#Deleted in new
chr14	24178182	24179688	chr14:24178182-24179688	0	+	24178182	24178182	8553170	5	40,311,49,67,94,	0,423,902,1214,1412,
#Deleted in new
chr14	24179435	24180253	chr14:24179435-24180253	0	+	24179435	24179435	8553170	4	28,132,107,227,	0,159,364,591,
#Deleted in new
chr14	24179527	24180035	chr14:24179527-24180035	0	+	24179527	24179527	8553170	2	379,26,	0,482,
#Deleted in new
chr14	24180218	24188964	chr14:24180218-24188964	3	-	24180441	24188787	0	30	354,70,105,133,209,126,51,194,106,58,78,116,112,121,114,114,130,109,110,54,165,84,102,66,180,130,42,80,87,246,	0,470,1294,1492,1736,2059,2573,2757,3031,3237,3371,3564,3779,4079,4431,4648,4964,5240,5642,5910,6068,6489,6659,6866,7181,7448,7997,8125,8333,8500,
#Deleted in new
chr14	24180218	24188822	chr14:24180218-24188822	0	-	24180218	24180218	8553170	29	354,70,105,133,209,126,51,194,106,58,78,116,112,121,114,114,130,109,110,54,165,84,102,66,180,130,42,295,104,	0,470,1294,1492,1736,2059,2573,2757,3031,3237,3371,3564,3779,4079,4431,4648,4964,5240,5642,5910,6068,6489,6659,6866,7181,7448,7997,8125,8500,
#Deleted in new
chr14	24180219	24188822	chr14:24180219-24188822	0	-	24187785	24188787	789624	30	353,70,105,133,209,146,51,194,106,58,78,116,112,121,114,114,130,109,110,54,165,84,102,66,180,147,42,80,87,104,	0,469,1293,1491,1735,2058,2572,2756,3030,3236,3370,3563,3778,4078,4430,4647,4963,5239,5641,5909,6067,6488,6658,6865,7180,7447,7996,8124,8332,8499,
#Deleted in new
chr14	24180219	24188797	chr14:24180219-24188797	0	-	24180219	24180219	8553170	29	353,70,105,133,209,126,51,194,106,58,78,116,112,121,114,114,130,109,110,77,165,84,102,66,180,130,42,80,246,	0,469,1293,1491,1735,2058,2572,2756,3030,3236,3370,3563,3778,4078,4430,4647,4963,5239,5641,5909,6067,6488,6658,6865,7180,7447,7996,8124,8332,
#Deleted in new
chr14	24180219	24184675	chr14:24180219-24184675	0	-	24180441	24184675	789624	15	353,76,105,133,209,126,51,194,106,58,78,116,112,121,26,	0,463,1293,1491,1735,2058,2572,2756,3030,3236,3370,3563,3778,4078,4430,
#Deleted in new
chr14	24180225	24188797	chr14:24180225-24188797	0	-	24187490	24188787	789624	30	347,70,105,133,209,126,51,194,106,58,78,116,112,121,114,114,130,109,110,54,165,84,102,66,180,130,42,48,87,79,	0,463,1287,1485,1729,2052,2566,2750,3024,3230,3364,3557,3772,4072,4424,4641,4957,5233,5635,5903,6061,6482,6652,6859,7174,7441,7990,8118,8326,8493,
#Deleted in new
chr14	24180304	24188869	chr14:24180304-24188869	0	-	24180304	24180304	8553170	29	268,70,105,133,209,126,51,186,106,58,78,116,112,121,114,114,130,109,110,54,165,84,102,66,180,130,42,80,318,	0,384,1208,1406,1650,1973,2487,2671,2945,3151,3285,3478,3693,3993,4345,4562,4878,5154,5556,5824,5982,6403,6573,6780,7095,7362,7911,8039,8247,
#Deleted in new
chr14	24180304	24188869	chr14:24180304-24188869	0	-	24182045	24188787	789624	30	268,70,105,133,209,146,51,194,106,58,78,116,112,121,114,114,130,109,110,54,165,84,102,66,180,130,42,80,87,151,	0,384,1208,1406,1650,1973,2487,2671,2945,3151,3285,3478,3693,3993,4345,4562,4878,5154,5556,5824,5982,6403,6573,6780,7095,7362,7911,8039,8247,8414,
#Deleted in new
chr14	24180363	24183272	chr14:24180363-24183272	0	-	24180441	24183272	789624	8	209,70,133,209,126,51,194,23,	0,325,1347,1591,1914,2428,2612,2886,
#Deleted in new
chr14	24180394	24190416	chr14:24180394-24190416	3	-	24189414	24190416	789624	31	178,70,105,133,209,126,51,194,106,58,78,116,112,121,114,114,130,109,110,54,165,84,102,66,180,130,42,80,87,1090,37,	0,294,1118,1316,1560,1883,2397,2581,2855,3061,3195,3388,3603,3903,4255,4472,4788,5064,5466,5734,5892,6313,6483,6690,7005,7272,7821,7949,8157,8324,9985,
#Deleted in new
chr14	24180441	24188797	chr14:24180441-24188797	0	-	24180441	24180441	8553170	28	131,70,105,133,209,126,51,194,137,212,116,112,121,114,130,109,110,54,165,84,102,66,180,130,42,80,87,79,	0,247,1071,1269,1513,1836,2350,2534,2808,3014,3341,3556,3856,4208,4741,5017,5419,5687,5845,6266,6436,6643,6958,7225,7774,7902,8110,8277,
#Deleted in new
chr14	24182535	24183472	chr14:24182535-24183472	0	-	24182535	24182535	8553170	4	307,194,106,17,	0,440,714,920,
#Deleted in new
chr14	24182816	24183650	chr14:24182816-24183650	0	-	24182816	24182816	8553170	2	26,675,	0,159,
#Deleted in new
chr14	24187086	24188844	chr14:24187086-24188844	0	-	24187560	24188787	789624	6	64,180,42,80,87,126,	0,313,1129,1257,1465,1632,
#Deleted in new
chr14	24187490	24188069	chr14:24187490-24188069	0	-	24187490	24187490	8553170	2	89,403,	0,176,
#Deleted in new
chr14	24187530	24188797	chr14:24187530-24188797	0	-	24187530	24187530	8553170	5	266,42,80,87,79,	0,685,813,1021,1188,
#Deleted in new
chr14	24187552	24188821	chr14:24187552-24188821	0	-	24187552	24187552	8553170	5	27,130,208,87,103,	0,114,663,999,1166,
#Deleted in new
chr14	24187560	24188787	chr14:24187560-24188787	1	-	24187560	24188787	789624	5	19,42,80,87,69,	0,655,783,991,1158,
#Deleted in new
chr14	24187945	24188797	chr14:24187945-24188797	0	-	24187945	24187945	8553170	4	312,80,87,79,	0,398,606,773,
#Deleted in new
chr14	24188004	24188822	chr14:24188004-24188822	0	-	24188571	24188787	789624	4	253,80,98,104,	0,339,547,714,
#Deleted in new
chr14	24188101	24188797	chr14:24188101-24188797	0	-	24188101	24188101	8553170	3	156,295,79,	0,242,617,
#Deleted in new
chr14	24188158	24188811	chr14:24188158-24188811	0	-	24188158	24188158	8553170	2	480,93,	0,560,
#Partially deleted in new
chr14	24189142	24195687	chr14:24189142-24195687	3	-	24189414	24195019	789624	6	666,274,186,622,362,342,	0,1237,3028,3505,5532,6203,
#Partially deleted in new
chr14	24189148	24195408	chr14:24189148-24195408	1	-	24189414	24195019	789624	5	660,223,186,622,734,	0,1282,3022,3499,5526,
#Partially deleted in new
chr14	24189156	24213473	chr14:24189156-24213473	3	-	24189414	24213439	789624	10	652,274,186,622,362,136,115,178,150,65,	0,1223,3014,3491,5518,21191,21497,22258,22523,24252,
#Partially deleted in new
chr14	24189191	24195453	chr14:24189191-24195453	0	-	24190481	24195019	789624	6	617,212,186,622,362,108,	0,1188,2979,3456,5483,6154,
#Partially deleted in new
chr14	24189400	24195637	chr14:24189400-24195637	1	-	24189414	24194758	789624	6	408,274,186,622,156,292,	0,979,2770,3247,5274,5945,
#Partially deleted in new
chr14	24189536	24195417	chr14:24189536-24195417	0	-	24189536	24195019	789624	4	272,56,105,72,	0,843,5410,5809,
#Partially deleted in new
chr14	24190041	24195618	chr14:24190041-24195618	1	-	24190336	24195019	789624	5	612,186,622,362,273,	0,2129,2606,4633,5304,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	24191733	24193113	chr14:24191733-24193113	0	-	24191733	24191733	8553170	2	623,466,	0,914,
#Partially deleted in new
chr14	24192712	24195350	chr14:24192712-24195350	0	-	24192712	24195019	789624	3	557,362,42,	0,1962,2596,
#Partially deleted in new
chr14	24192730	24195334	chr14:24192730-24195334	0	-	24192730	24194758	789624	3	539,156,26,	0,1944,2578,
#Partially deleted in new
chr14	24192842	24195584	chr14:24192842-24195584	0	-	24192842	24195019	789624	3	427,362,276,	0,1832,2466,
#Partially deleted in new
chr14	24192887	24195687	chr14:24192887-24195687	0	-	24192887	24195019	789624	3	382,362,138,	0,1787,2662,
#Partially deleted in new
chr14	24192984	24195587	chr14:24192984-24195587	0	-	24192984	24195019	789624	3	285,377,242,	0,1690,2361,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	24198432	24199090	chr14:24198432-24199090	3	+	24198432	24198432	8553170	1	658,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	24201611	24202811	chr14:24201611-24202811	3	-	24201611	24201611	8553170	1	1200,	0,
#Deleted in new
chr14	24205696	24208248	chr14:24205696-24208248	0	+	24205696	24205696	8553170	3	108,1001,285,	0,812,2267,
#Deleted in new
chr14	24205719	24208246	chr14:24205719-24208246	1	+	24205923	24208146	789624	4	429,215,394,283,	0,789,1396,2244,
#Deleted in new
chr14	24205727	24208203	chr14:24205727-24208203	1	+	24206511	24208146	789624	4	77,215,364,240,	0,781,1418,2236,
#Deleted in new
chr14	24205755	24208248	chr14:24205755-24208248	3	+	24205923	24208146	789624	4	393,215,364,285,	0,753,1390,2208,
#Deleted in new
chr14	24205857	24208248	chr14:24205857-24208248	1	+	24205923	24208146	789624	2	291,285,	0,2106,
#Deleted in new
chr14	24205940	24208248	chr14:24205940-24208248	0	+	24205940	24207970	789624	3	208,215,285,	0,568,2023,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	24207255	24208362	chr14:24207255-24208362	0	+	24207255	24207963	789624	2	254,471,	0,636,
#Partially deleted in new
chr14	24209582	24213869	chr14:24209582-24213869	3	-	24209876	24213568	0	6	353,136,115,178,150,461,	0,765,1071,1832,2097,3826,
#Partially deleted in new
chr14	24209623	24213489	chr14:24209623-24213489	1	-	24209876	24211458	789624	6	312,136,115,178,145,81,	0,724,1030,1791,2056,3785,
#Partially deleted in new
chr14	24209645	24215974	chr14:24209645-24215974	3	-	24209645	24209645	8553170	10	290,136,115,178,150,743,86,108,246,56,	0,702,1008,1769,2034,3763,4664,4846,5906,6273,
#Partially deleted in new
chr14	24209674	24213830	chr14:24209674-24213830	0	-	24210759	24213568	789624	6	261,136,115,182,150,422,	0,673,979,1736,2005,3734,
#Partially deleted in new
chr14	24209733	24213085	chr14:24209733-24213085	0	-	24209733	24209733	8553170	6	202,136,115,182,150,62,	0,614,920,1677,1946,3290,
#Partially deleted in new
chr14	24209859	24213488	chr14:24209859-24213488	1	-	24209876	24213439	0	6	76,136,115,178,150,80,	0,488,794,1555,1820,3549,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	24210347	24212704	chr14:24210347-24212704	0	-	24210347	24212611	789624	5	136,115,178,150,154,	0,306,1067,1332,2203,
#Deleted in new
chr14	24210423	24210861	chr14:24210423-24210861	0	-	24210423	24210423	8553170	2	60,208,	0,230,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	24210664	24212109	chr14:24210664-24212109	0	-	24210664	24210664	8553170	3	104,182,430,	0,746,1015,
#Partially deleted in new
chr14	24210674	24213432	chr14:24210674-24213432	0	-	24211501	24213432	789624	4	94,102,150,24,	0,736,1005,2734,
#Partially deleted in new
chr14	24211251	24213488	chr14:24211251-24213488	0	-	24211251	24211251	8553170	3	341,150,80,	0,428,2157,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	24211509	24213095	chr14:24211509-24213095	0	-	24211509	24211509	8553170	3	83,150,330,	0,170,1256,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	24212738	24215987	chr14:24212738-24215987	0	-	24212738	24212738	8553170	4	1861,111,61,69,	0,2813,2998,3180,
#Partially deleted in new
chr14	24213936	24216067	chr14:24213936-24216067	3	-	24214023	24215955	0	6	215,86,108,111,61,149,	0,373,555,1615,1800,1982,
#Partially deleted in new
chr14	24213942	24216065	chr14:24213942-24216065	1	-	24214045	24215955	0	5	209,54,111,61,147,	0,603,1609,1794,1976,
#Partially deleted in new
chr14	24213942	24216037	chr14:24213942-24216037	0	-	24213942	24213942	8553170	4	209,86,108,486,	0,367,549,1609,
#Partially deleted in new
chr14	24213949	24215877	chr14:24213949-24215877	0	-	24213949	24213949	8553170	4	202,108,111,141,	0,542,1602,1787,
#Partially deleted in new
chr14	24213951	24215798	chr14:24213951-24215798	0	-	24213951	24213951	8553170	3	200,54,247,	0,594,1600,
#Partially deleted in new
chr14	24213953	24215638	chr14:24213953-24215638	0	-	24213953	24213953	8553170	4	198,134,108,87,	0,308,538,1598,
#Partially deleted in new
chr14	24213954	24232336	chr14:24213954-24232336	0	-	24215594	24232267	789624	8	197,86,108,111,38,83,48,87,	0,355,537,1597,3231,4178,4429,18295,
#Partially deleted in new
chr14	24214037	24215997	chr14:24214037-24215997	0	-	24214037	24214037	8553170	4	114,108,246,110,	0,454,1514,1850,
#Partially deleted in new
chr14	24214095	24232352	chr14:24214095-24232352	3	-	24214095	24232267	789624	7	56,86,108,111,83,48,103,	0,214,396,1456,4037,4288,18154,
#Partially deleted in new
chr14	24214323	24216070	chr14:24214323-24216070	0	-	24214323	24214323	8553170	4	72,108,246,152,	0,168,1228,1595,
#Partially deleted in new
chr14	24214366	24215962	chr14:24214366-24215962	0	-	24214366	24214366	8553170	3	233,246,44,	0,1185,1552,
#Partially deleted in new
chr14	24214371	24232285	chr14:24214371-24232285	0	-	24215742	24232267	789624	7	24,108,111,61,83,48,36,	0,120,1180,1365,3761,4012,17878,
#Partially deleted in new
chr14	24214377	24232285	chr14:24214377-24232285	0	-	24214377	24214377	8553170	8	18,108,111,61,83,48,216,36,	0,114,1174,1359,3755,4006,17274,17872,
#Partially deleted in new
chr14	24214389	24216059	chr14:24214389-24216059	0	-	24214389	24214389	8553170	2	210,508,	0,1162,
#Partially deleted in new
chr14	24216851	24232454	chr14:24216851-24232454	3	-	24217126	24232267	0	4	372,83,48,205,	0,1281,1532,15398,
#Partially deleted in new
chr14	24216856	24232303	chr14:24216856-24232303	0	-	24218128	24232267	789624	4	367,157,48,54,	0,1202,1527,15393,
#Partially deleted in new
chr14	24216858	24232002	chr14:24216858-24232002	0	-	24216858	24216858	8553170	4	365,83,48,351,	0,1274,1525,14793,
#Partially deleted in new
chr14	24216865	24232325	chr14:24216865-24232325	0	-	24216865	24216865	8553170	5	358,83,48,86,76,	0,1267,1518,14786,15384,
#Partially deleted in new
chr14	24216995	24218726	chr14:24216995-24218726	0	-	24216995	24216995	8553170	3	228,83,343,	0,1137,1388,
#Partially deleted in new
chr14	24217019	24232331	chr14:24217019-24232331	0	-	24217019	24217019	8553170	2	204,82,	0,15230,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	24217715	24232354	chr14:24217715-24232354	1	-	24218128	24232267	789624	3	500,48,105,	0,668,14534,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	24226604	24232355	chr14:24226604-24232355	0	-	24226604	24226604	8553170	3	2108,86,106,	0,5047,5645,
#Deleted in new
chr14	24232421	24239242	chr14:24232421-24239242	3	+	24233253	24238778	0	10	426,122,120,84,174,82,107,43,160,654,	0,797,1057,3315,3545,4649,4823,5098,5824,6167,
#Deleted in new
chr14	24232421	24239239	chr14:24232421-24239239	1	+	24233253	24238778	789624	11	367,122,120,84,78,96,82,107,43,160,651,	0,797,1057,3315,3543,3623,4649,4823,5098,5824,6167,
#Deleted in new
chr14	24232441	24239242	chr14:24232441-24239242	1	+	24233253	24238778	0	10	347,122,120,84,174,82,107,43,160,654,	0,777,1037,3295,3525,4629,4803,5078,5804,6147,
#Deleted in new
chr14	24232489	24239239	chr14:24232489-24239239	0	+	24233253	24234112	789624	10	299,122,120,135,84,174,82,107,43,994,	0,729,989,1617,3247,3477,4581,4755,5030,5756,
#Deleted in new
chr14	24232634	24239207	chr14:24232634-24239207	0	+	24233253	24235762	789624	10	213,122,115,84,174,111,107,43,160,619,	0,584,844,3102,3332,4407,4610,4885,5611,5954,
#Deleted in new
chr14	24232635	24239204	chr14:24232635-24239204	1	+	24233253	24238778	789624	10	153,122,120,84,75,82,107,43,160,616,	0,583,843,3101,3331,4435,4609,4884,5610,5953,
#Deleted in new
chr14	24232635	24237099	chr14:24232635-24237099	0	+	24233253	24237099	789624	6	153,122,120,84,75,29,	0,583,843,3101,3331,4435,
#Deleted in new
chr14	24232641	24233675	chr14:24232641-24233675	0	+	24232641	24232641	8553170	3	147,122,197,	0,577,837,
#Deleted in new
chr14	24232650	24239239	chr14:24232650-24239239	1	+	24233253	24238778	789624	12	138,122,120,74,94,6,87,82,107,43,160,651,	0,568,828,3086,3298,3395,3403,4420,4594,4869,5595,5938,
#Deleted in new
chr14	24232665	24237287	chr14:24232665-24237287	0	+	24233253	24237287	789624	8	123,122,120,129,84,174,82,43,	0,553,813,1447,3071,3301,4405,4579,
#Deleted in new
chr14	24232675	24236140	chr14:24232675-24236140	0	+	24233253	24236140	789624	5	113,122,108,84,174,	0,543,803,3061,3291,
#Deleted in new
chr14	24232685	24238387	chr14:24232685-24238387	0	+	24236137	24238387	789624	7	103,84,174,82,107,43,142,	0,3051,3281,4385,4559,4834,5560,
#Deleted in new
chr14	24232749	24236010	chr14:24232749-24236010	0	+	24233553	24236010	789624	4	98,120,84,44,	0,729,2987,3217,
#Deleted in new
chr14	24232871	24239242	chr14:24232871-24239242	1	+	24233253	24238778	0	10	106,122,120,84,174,82,107,43,160,654,	0,347,607,2865,3095,4199,4373,4648,5374,5717,
#Deleted in new
chr14	24232892	24235816	chr14:24232892-24235816	0	+	24232892	24232892	8553170	4	85,122,115,80,	0,326,586,2844,
#Deleted in new
chr14	24232897	24237289	chr14:24232897-24237289	0	+	24233253	24234112	789624	8	80,122,120,135,84,174,82,45,	0,321,581,1209,2839,3069,4173,4347,
#Deleted in new
chr14	24232900	24239242	chr14:24232900-24239242	1	+	24233199	24238778	0	9	440,120,84,174,82,107,43,160,654,	0,578,2836,3066,4170,4344,4619,5345,5688,
#Deleted in new
chr14	24232901	24236005	chr14:24232901-24236005	0	+	24233199	24234112	789624	5	439,120,135,84,39,	0,577,1205,2835,3065,
#Deleted in new
chr14	24232917	24236065	chr14:24232917-24236065	0	+	24233199	24235762	789624	4	423,115,84,99,	0,561,2819,3049,
#Deleted in new
chr14	24232922	24239242	chr14:24232922-24239242	1	+	24233199	24238778	789624	8	418,120,84,174,82,107,43,997,	0,556,2814,3044,4148,4322,4597,5323,
#Deleted in new
chr14	24232946	24239242	chr14:24232946-24239242	1	+	24233199	24238778	789624	9	394,120,84,75,82,107,43,160,654,	0,532,2790,3020,4124,4298,4573,5299,5642,
#Deleted in new
chr14	24232947	24239234	chr14:24232947-24239234	1	+	24233253	24238778	0	9	30,122,120,174,82,107,43,160,646,	0,271,531,3019,4123,4297,4572,5298,5641,
#Deleted in new
chr14	24235373	24237152	chr14:24235373-24237152	0	+	24235373	24235373	8553170	3	447,174,111,	0,593,1668,
#Deleted in new
chr14	24236095	24239046	chr14:24236095-24239046	0	+	24236095	24238699	789624	6	45,82,107,43,160,420,	0,975,1149,1424,2150,2531,
#Deleted in new
chr14	24236974	24237953	chr14:24236974-24237953	0	+	24236974	24236974	8553170	3	178,107,434,	0,270,545,
#Deleted in new
chr14	24237272	24238826	chr14:24237272-24238826	0	+	24237272	24238659	789624	3	79,43,238,	0,247,1316,
#Deleted in new
chr14	24238187	24238839	chr14:24238187-24238839	0	+	24238187	24238187	8553170	2	218,251,	0,401,
#Deleted in new
chr14	24238245	24239242	chr14:24238245-24239242	0	+	24238245	24239004	789624	3	160,160,337,	0,343,660,
#Deleted in new
chr14	24238330	24239240	chr14:24238330-24239240	0	+	24238330	24238778	789624	3	75,215,283,	0,258,627,
#Deleted in new
chr14	24238378	24238800	chr14:24238378-24238800	0	+	24238378	24238778	789624	2	27,204,	0,218,
#Deleted in new
chr14	24238588	24239241	chr14:24238588-24239241	0	+	24238588	24239004	789624	2	181,336,	0,317,
#Partially deleted in new
chr14	24239642	24242674	chr14:24239642-24242674	3	-	24239796	24242332	0	9	289,92,68,457,97,108,102,105,534,	0,421,620,776,1377,1561,2032,2247,2498,
#Partially deleted in new
chr14	24239642	24242663	chr14:24239642-24242663	1	-	24240414	24242332	0	6	1233,97,108,102,105,523,	0,1377,1561,2032,2247,2498,
#Deleted in new
chr14	24239642	24240242	chr14:24239642-24240242	0	-	24239642	24239642	8553170	2	289,179,	0,421,
#Partially deleted in new
chr14	24239642	24242618	chr14:24239642-24242618	1	-	24239796	24242332	0	9	289,92,68,457,97,108,102,105,478,	0,421,620,776,1377,1561,2032,2247,2498,
#Deleted in new
chr14	24239642	24240474	chr14:24239642-24240474	0	-	24240021	24240474	789624	3	513,68,56,	0,620,776,
#Partially deleted in new
chr14	24239646	24242674	chr14:24239646-24242674	1	-	24240851	24242332	789624	7	285,92,68,457,102,105,534,	0,417,616,772,2028,2243,2494,
#Partially deleted in new
chr14	24239646	24242605	chr14:24239646-24242605	1	-	24239796	24242332	789624	8	285,92,68,457,97,108,102,465,	0,417,616,772,1373,1557,2028,2494,
#Partially deleted in new
chr14	24239681	24242613	chr14:24239681-24242613	1	-	24240851	24242332	789624	4	1194,102,105,473,	0,1993,2208,2459,
#Deleted in new
chr14	24239794	24240598	chr14:24239794-24240598	0	-	24239794	24239794	8553170	3	137,92,336,	0,269,468,
#Partially deleted in new
chr14	24240482	24242632	chr14:24240482-24242632	1	-	24240851	24242332	789624	2	393,492,	0,1658,
#Partially deleted in new
chr14	24240500	24242407	chr14:24240500-24242407	0	-	24240500	24242332	789624	5	375,97,102,105,267,	0,519,1174,1389,1640,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	24240578	24241436	chr14:24240578-24241436	0	-	24240578	24240578	8553170	3	297,97,233,	0,441,625,
#Partially deleted in new
chr14	24240602	24242585	chr14:24240602-24242585	0	-	24240602	24241272	789624	6	273,97,108,102,105,209,	0,417,601,1072,1287,1774,
#Partially deleted in new
chr14	24241113	24242342	chr14:24241113-24242342	0	-	24241113	24241113	8553170	4	198,102,105,202,	0,561,776,1027,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	24241390	24242077	chr14:24241390-24242077	0	-	24241390	24241390	8553170	2	386,188,	0,499,
#Deleted in new
chr14	24241729	24242635	chr14:24241729-24242635	0	-	24241729	24241729	8553170	3	47,32,495,	0,160,411,
#Partially deleted in new
chr14	24249113	24263210	chr14:24249113-24263210	3	-	24249312	24262352	0	15	428,137,161,282,154,89,104,139,175,108,119,249,189,321,122,	0,5038,5550,5858,6250,6875,9171,9421,9961,10590,10826,11336,12581,12920,13975,
#Partially deleted in new
chr14	24249207	24263180	chr14:24249207-24263180	1	-	24249312	24258360	0	9	334,137,161,282,154,89,104,228,92,	0,4944,5456,5764,6156,6781,9077,12919,13881,
#Partially deleted in new
chr14	24254122	24255056	chr14:24254122-24255056	0	-	24254147	24255056	789624	3	166,161,85,	0,541,849,
#Deleted in new
chr14	24255453	24260158	chr14:24255453-24260158	0	-	24255453	24259760	789624	7	64,89,104,139,175,108,219,	0,535,2831,3081,3621,4250,4486,
#Deleted in new
chr14	24261797	24263538	chr14:24261797-24263538	0	-	24261797	24262352	789624	4	86,321,115,33,	0,236,1291,1708,
#Deleted in new
chr14	24262158	24264264	chr14:24262158-24264264	0	-	24262158	24262352	789624	2	196,331,	0,1775,
#Deleted in new
chr14	24262201	24264238	chr14:24262201-24264238	0	-	24262201	24262352	789624	3	153,104,305,	0,887,1732,
#Deleted in new
chr14	24262226	24263540	chr14:24262226-24263540	0	-	24262226	24262352	789624	2	128,452,	0,862,
#Deleted in new
chr14	24262324	24264432	chr14:24262324-24264432	0	-	24262324	24262352	789624	2	30,439,	0,1669,
#Partially deleted in new
chr14	24265537	24271739	chr14:24265537-24271739	3	-	24265614	24271115	789624	17	226,88,114,117,89,89,52,106,102,83,84,204,188,125,111,57,253,	0,892,1238,2122,2332,2572,2831,2976,3187,3373,3542,3953,4415,4796,5299,5575,5949,
#Partially deleted in new
chr14	24265537	24271599	chr14:24265537-24271599	1	-	24265614	24271115	789624	16	226,88,114,117,89,89,52,106,102,83,84,204,188,125,111,487,	0,892,1238,2122,2332,2572,2831,2976,3187,3373,3542,3953,4415,4796,5299,5575,
#Deleted in new
chr14	24265537	24268163	chr14:24265537-24268163	0	-	24265690	24268163	789624	6	218,88,114,117,89,54,	0,892,1238,2122,2332,2572,
#Deleted in new
chr14	24265537	24267708	chr14:24265537-24267708	0	-	24265537	24265537	8553170	3	226,460,49,	0,892,2122,
#Deleted in new
chr14	24265541	24268164	chr14:24265541-24268164	0	-	24266500	24268164	789624	7	222,88,19,114,117,89,55,	0,888,1123,1234,2118,2328,2568,
#Partially deleted in new
chr14	24265551	24271556	chr14:24265551-24271556	0	-	24265551	24265551	8553170	16	212,88,114,117,93,89,52,106,102,83,84,204,188,125,333,70,	0,878,1224,2108,2314,2558,2817,2962,3173,3359,3528,3939,4401,4782,5285,5935,
#Partially deleted in new
chr14	24265555	24271549	chr14:24265555-24271549	0	-	24267741	24271115	789624	17	208,88,114,117,93,89,52,106,102,83,84,204,188,125,111,136,63,	0,874,1220,2104,2310,2554,2813,2958,3169,3355,3524,3935,4397,4778,5281,5557,5931,
#Partially deleted in new
chr14	24265556	24271549	chr14:24265556-24271549	0	-	24267741	24271115	789624	17	207,88,114,117,93,89,52,106,102,83,84,204,188,125,111,57,63,	0,873,1219,2103,2309,2553,2812,2957,3168,3354,3523,3934,4396,4777,5280,5556,5930,
#Deleted in new
chr14	24265567	24270001	chr14:24265567-24270001	1	-	24265614	24267932	789624	10	196,88,114,117,89,89,167,84,204,49,	0,862,1208,2092,2302,2542,3259,3512,3923,4385,
#Partially deleted in new
chr14	24265569	24271510	chr14:24265569-24271510	0	-	24265569	24265569	8553170	16	194,88,114,117,89,311,106,102,83,84,204,188,125,111,57,24,	0,860,1206,2090,2300,2540,2944,3155,3341,3510,3921,4383,4764,5267,5543,5917,
#Deleted in new
chr14	24266604	24268386	chr14:24266604-24268386	0	-	24266604	24266604	8553170	4	285,117,89,277,	0,1055,1265,1505,
#Deleted in new
chr14	24266785	24268182	chr14:24266785-24268182	0	-	24266785	24266785	8553170	3	104,117,313,	0,874,1084,
#Deleted in new
chr14	24266816	24269149	chr14:24266816-24269149	0	-	24266816	24266816	8553170	8	73,117,89,89,52,313,83,70,	0,843,1053,1293,1552,1697,2094,2263,
#Partially deleted in new
chr14	24267903	24271183	chr14:24267903-24271183	0	-	24267903	24267903	8553170	10	55,311,106,102,83,84,204,188,125,71,	0,206,610,821,1007,1176,1587,2049,2430,3209,
#Partially deleted in new
chr14	24269287	24271583	chr14:24269287-24271583	0	-	24269287	24269287	8553170	7	114,61,188,125,111,57,97,	0,203,665,1046,1549,1825,2199,
#Deleted in new
chr14	24269345	24270444	chr14:24269345-24270444	0	-	24269345	24269345	8553170	3	349,188,111,	0,607,988,
#Partially deleted in new
chr14	24269373	24271611	chr14:24269373-24271611	0	-	24269373	24269373	8553170	7	28,204,188,125,162,57,125,	0,117,579,960,1463,1739,2113,
#Partially deleted in new
chr14	24269628	24271538	chr14:24269628-24271538	0	-	24270131	24271115	789624	6	66,188,99,111,57,52,	0,324,731,1208,1484,1858,
#Partially deleted in new
chr14	24269659	24271597	chr14:24269659-24271597	0	-	24269659	24269659	8553170	5	35,188,125,111,111,	0,293,674,1177,1827,
#Partially deleted in new
chr14	24269954	24271516	chr14:24269954-24271516	0	-	24269954	24269954	8553170	4	186,125,162,404,	0,379,882,1158,
#Partially deleted in new
chr14	24270348	24271404	chr14:24270348-24271404	0	-	24270348	24270348	8553170	2	110,568,	0,488,
#Partially deleted in new
chr14	24290597	24299833	chr14:24290597-24299833	3	-	24290858	24299106	0	9	398,81,70,147,133,80,144,174,253,	0,541,958,1586,2054,5911,6140,8359,8983,
#Deleted in new
chr14	24290597	24291125	chr14:24290597-24291125	0	-	24290597	24290597	8553170	1	528,	0,
#Deleted in new
chr14	24290597	24292643	chr14:24290597-24292643	0	-	24290597	24290597	8553170	5	398,81,70,147,23,	0,541,958,1586,2023,
#Deleted in new
chr14	24290597	24291921	chr14:24290597-24291921	0	-	24290597	24290597	8553170	2	398,783,	0,541,
#Partially deleted in new
chr14	24290599	24299460	chr14:24290599-24299460	1	-	24290858	24299106	0	9	396,81,70,147,133,80,144,174,245,	0,539,956,1584,2052,5909,6138,8357,8616,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	24290599	24294656	chr14:24290599-24294656	0	-	24290599	24290599	8553170	4	396,81,147,2036,	0,539,1584,2021,
#Partially deleted in new
chr14	24290602	24299743	chr14:24290602-24299743	0	-	24292631	24299106	789624	8	393,81,70,518,80,144,174,163,	0,536,953,1581,5906,6135,8354,8978,
#Partially deleted in new
chr14	24290635	24299761	chr14:24290635-24299761	0	-	24290635	24290635	8553170	7	360,487,601,80,144,174,181,	0,503,1548,5873,6102,8321,8945,
#Partially deleted in new
chr14	24292211	24299692	chr14:24292211-24299692	0	-	24292211	24292211	8553170	5	119,80,144,174,112,	0,4297,4526,6745,7369,
#Partially deleted in new
chr14	24296661	24299751	chr14:24296661-24299751	0	-	24296661	24296661	8553170	3	220,174,171,	0,2295,2919,
#Deleted in new
chr14	24298710	24299769	chr14:24298710-24299769	0	-	24298710	24298710	8553170	2	420,189,	0,870,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	24299861	24309124	chr14:24299861-24309124	3	+	24299954	24305095	789624	10	340,450,111,142,193,141,126,237,106,4187,	0,546,1750,2103,2370,3212,3870,4179,4631,5076,
#Partially deleted in new
chr14	24299878	24305216	chr14:24299878-24305216	1	+	24299954	24304958	789624	10	323,450,111,142,193,141,126,148,29,279,	0,529,1733,2086,2353,3195,3853,4162,4691,5059,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	24300676	24309110	chr14:24300676-24309110	0	+	24300676	24305606	8553170	11	181,111,142,193,141,126,237,106,108,287,507,	0,935,1288,1555,2397,3055,3364,3816,4261,4904,7927,
#Partially deleted in new
chr14	24302404	24306655	chr14:24302404-24306655	0	+	24302404	24306493	789624	4	20,141,126,168,	0,669,1327,4083,
#Deleted in new
chr14	24305095	24308263	chr14:24305095-24308263	1	-	24305632	24307858	0	5	670,191,150,145,446,	0,851,1278,2275,2722,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	24305186	24311422	chr14:24305186-24311422	3	-	24305632	24307858	0	7	579,191,150,145,103,352,774,	0,760,1187,2184,2631,3292,5462,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	24305186	24311395	chr14:24305186-24311395	1	-	24305632	24307858	0	8	579,191,150,145,103,352,142,747,	0,760,1187,2184,2631,3292,5220,5462,
#Deleted in new
chr14	24305605	24306461	chr14:24305605-24306461	0	-	24305669	24306461	789624	2	160,88,	0,768,
#Partially deleted in new
chr14	24305733	24311145	chr14:24305733-24311145	0	+	24310664	24311145	789624	3	134,85,491,	0,4437,4921,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	24308954	24312046	chr14:24308954-24312046	1	+	24310571	24311741	789624	1	3092,	0,
#Deleted in new
chr14	24310086	24310718	chr14:24310086-24310718	0	-	24310086	24310086	8553170	2	462,70,	0,562,
#Deleted in new
chr14	24310139	24312053	chr14:24310139-24312053	3	+	24310664	24311741	789624	2	116,1399,	0,515,
#Deleted in new
chr14	24310150	24312053	chr14:24310150-24312053	1	+	24310664	24311741	789624	2	105,1455,	0,448,
#Deleted in new
chr14	24310170	24311621	chr14:24310170-24311621	0	+	24310664	24311621	789624	2	85,1023,	0,428,
#Deleted in new
chr14	24310798	24311430	chr14:24310798-24311430	0	-	24310798	24310798	8553170	2	349,203,	0,429,
#Partially deleted in new
chr14	24311449	24315958	chr14:24311449-24315958	0	+	24315651	24315958	789624	2	109,322,	0,4187,
#Partially deleted in new
chr14	24311498	24316946	chr14:24311498-24316946	3	+	24315651	24316710	789624	2	306,1310,	0,4138,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	24313310	24318036	chr14:24313310-24318036	1	+	24315651	24316710	789624	2	1710,2400,	0,2326,
#Deleted in new
chr14	24313913	24316647	chr14:24313913-24316647	0	+	24315951	24316647	789624	2	42,755,	0,1979,
#Deleted in new
chr14	24314699	24316946	chr14:24314699-24316946	1	+	24315651	24316710	789624	2	317,1310,	0,937,
#Partially deleted in new
chr14	24318348	24335071	chr14:24318348-24335071	3	-	24318415	24334652	789624	26	220,125,115,108,147,159,85,185,111,138,85,98,70,87,44,174,133,159,128,112,149,150,162,198,185,88,	0,305,749,980,1393,3717,4275,4555,4995,5713,5958,7028,7469,7730,7950,10712,11052,11511,11819,12669,12859,13439,14173,14442,16145,16635,
#Partially deleted in new
chr14	24318348	24335071	chr14:24318348-24335071	0	-	24329901	24332644	789624	21	220,125,115,108,147,1389,138,85,98,70,87,44,174,133,159,112,149,150,201,198,88,	0,305,749,980,1393,3717,5713,5958,7028,7469,7730,7950,10712,11052,11511,12669,12859,13439,14173,14442,16635,
#Partially deleted in new
chr14	24318363	24335071	chr14:24318363-24335071	1	-	24318415	24334652	789624	26	205,125,115,108,147,159,85,185,111,138,85,98,70,87,44,174,133,159,128,112,149,150,162,198,189,88,	0,290,734,965,1378,3702,4260,4540,4980,5698,5943,7013,7454,7715,7935,10697,11037,11496,11804,12654,12844,13424,14158,14427,16130,16620,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr14	24318363	24332484	chr14:24318363-24332484	0	-	24318363	24318363	8553170	19	205,125,115,108,147,261,643,185,111,138,85,98,70,87,44,174,133,1270,1277,	0,290,734,965,1378,3352,3702,4540,4980,5698,5943,7013,7454,7715,7935,10697,11037,11496,12844,
#Deleted in new
chr14	24318363	24319209	chr14:24318363-24319209	0	-	24318363	24318363	8553170	1	846,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr14	24318364	24330608	chr14:24318364-24330608	0	-	24318364	24318364	8553170	16	204,125,115,108,163,159,85,185,111,98,70,264,267,174,133,749,	0,289,733,964,1377,3701,4259,4539,4979,7012,7453,7714,10242,10696,11036,11495,
#Partially deleted in new
chr14	24318391	24334747	chr14:24318391-24334747	1	-	24318415	24334652	789624	25	177,125,115,108,147,159,85,185,111,138,85,98,70,87,44,174,133,159,128,112,149,150,162,198,254,	0,262,706,937,1350,3674,4232,4512,4952,5670,5915,6985,7426,7687,7907,10669,11009,11468,11776,12626,12816,13396,14130,14399,16102,
#Partially deleted in new
chr14	24318391	24334747	chr14:24318391-24334747	0	-	24329432	24334652	789624	25	177,125,115,108,147,159,85,185,111,138,85,98,70,87,44,174,133,159,160,112,149,150,162,198,254,	0,262,706,937,1350,3674,4232,4512,4952,5670,5915,6985,7426,7687,7907,10669,11009,11468,11776,12626,12816,13396,14130,14399,16102,
#Deleted in new
chr14	24318924	24319779	chr14:24318924-24319779	0	-	24318924	24318924	8553170	3	288,108,38,	0,404,817,
#Partially deleted in new
chr14	24319305	24322363	chr14:24319305-24322363	0	-	24319305	24319305	8553170	3	228,147,298,	0,436,2760,
#Deleted in new
chr14	24322395	24323563	chr14:24322395-24323563	0	-	24322395	24322395	8553170	2	693,220,	0,948,
#Deleted in new
chr14	24325406	24326515	chr14:24325406-24326515	0	-	24325406	24325406	8553170	3	68,70,437,	0,411,672,
#Partially deleted in new
chr14	24325823	24329468	chr14:24325823-24329468	0	-	24325823	24329468	789624	5	64,61,44,174,68,	0,281,475,3237,3577,
#Deleted in new
chr14	24330581	24332571	chr14:24330581-24332571	0	-	24330581	24330581	8553170	4	548,149,150,50,	0,626,1206,1940,
#Partially deleted in new
chr14	24332237	24335093	chr14:24332237-24335093	0	-	24332237	24332237	8553170	2	751,600,	0,2256,
#Partially deleted in new
chr14	24332309	24337382	chr14:24332309-24337382	3	-	24332468	24337382	789624	4	374,198,61,297,	0,481,4575,4776,
#Partially deleted in new
chr14	24332536	24335071	chr14:24332536-24335071	0	-	24332536	24332644	789624	4	147,198,142,88,	0,254,1957,2447,
#Partially deleted in new
chr14	24332658	24335071	chr14:24332658-24335071	0	-	24332658	24332658	8553170	4	25,198,142,187,	0,132,1835,2226,
#Partially deleted in new
chr14	24332707	24335071	chr14:24332707-24335071	0	-	24332707	24332707	8553170	4	15,198,142,88,	0,83,1786,2276,
#Partially deleted in new
chr14	24332801	24335071	chr14:24332801-24335071	0	-	24332801	24334652	789624	3	187,185,187,	0,1692,2083,
#Deleted in new
chr14	24336020	24340045	chr14:24336020-24340045	3	-	24336174	24339826	789624	10	375,61,375,68,168,47,146,310,141,239,	0,864,1065,1674,1852,2228,2401,2994,3436,3786,
#Deleted in new
chr14	24336174	24339989	chr14:24336174-24339989	0	-	24338216	24339826	789624	10	221,61,375,68,168,85,146,310,141,183,	0,710,911,1520,1698,2036,2247,2840,3282,3632,
#Deleted in new
chr14	24336675	24337402	chr14:24336675-24337402	0	-	24336774	24337402	789624	2	270,317,	0,410,
#Deleted in new
chr14	24338045	24340015	chr14:24338045-24340015	0	-	24338045	24338045	8553170	3	1279,141,209,	0,1411,1761,
#Deleted in new
chr14	24339156	24340022	chr14:24339156-24340022	0	-	24339156	24339156	8553170	2	441,216,	0,650,
#Deleted in new
chr14	24339191	24339989	chr14:24339191-24339989	0	-	24339191	24339191	8553170	3	133,184,183,	0,222,615,
#Deleted in new
chr14	24339299	24340000	chr14:24339299-24340000	0	-	24339299	24339299	8553170	2	25,544,	0,157,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	24352056	24352157	chr14:24352056-24352157	3	-	24352056	24352056	8553170	1	101,	0,
#Partially deleted in new
chr14	24366910	24379604	chr14:24366910-24379604	1	+	24367054	24376943	0	10	304,129,1096,163,200,173,141,56,127,3311,	0,1401,2588,5530,6260,6784,7415,8749,9064,9383,
#Partially deleted in new
chr14	24366938	24377908	chr14:24366938-24377908	1	+	24367054	24377705	0	11	276,129,1096,163,200,173,141,56,127,261,271,	0,1373,2560,5502,6232,6756,7387,8721,9036,9355,10699,
#Partially deleted in new
chr14	24367259	24379604	chr14:24367259-24379604	1	+	24367341	24376943	0	10	92,129,1096,163,200,173,141,56,127,3311,	0,1052,2239,5181,5911,6435,7066,8400,8715,9034,
#Partially deleted in new
chr14	24367259	24377705	chr14:24367259-24377705	1	+	24367341	24377705	0	11	92,129,1096,163,200,173,141,56,127,261,68,	0,1052,2239,5181,5911,6435,7066,8400,8715,9034,10378,
#Partially deleted in new
chr14	24367259	24377705	chr14:24367259-24377705	1	+	24367341	24377705	0	11	92,129,1096,163,200,173,141,56,127,585,68,	0,1052,2239,5181,5911,6435,7066,8400,8715,9034,10378,
#Partially deleted in new
chr14	24367259	24374145	chr14:24367259-24374145	0	+	24367259	24367259	8553170	6	92,129,1096,163,200,451,	0,1052,2239,5181,5911,6435,
#Partially deleted in new
chr14	24367363	24379604	chr14:24367363-24379604	1	+	24367586	24376943	0	10	290,129,1096,163,200,173,141,56,127,3311,	0,948,2135,5077,5807,6331,6962,8296,8611,8930,
#Partially deleted in new
chr14	24367467	24377705	chr14:24367467-24377705	1	+	24367586	24377705	0	11	186,129,1096,163,200,173,141,56,127,585,68,	0,844,2031,4973,5703,6227,6858,8192,8507,8826,10170,
#Partially deleted in new
chr14	24367501	24377705	chr14:24367501-24377705	1	+	24367586	24377705	0	11	152,129,1096,163,200,173,141,56,127,261,68,	0,810,1997,4939,5669,6193,6824,8158,8473,8792,10136,
#Partially deleted in new
chr14	24368019	24378056	chr14:24368019-24378056	1	+	24368340	24377705	0	10	421,1096,163,200,173,141,56,127,261,419,	0,1479,4421,5151,5675,6306,7640,7955,8274,9618,
#Partially deleted in new
chr14	24368047	24377717	chr14:24368047-24377717	0	+	24368047	24368047	8553170	10	393,1096,526,200,173,141,56,127,585,80,	0,1451,4030,5123,5647,6278,7612,7927,8246,9590,
#Deleted in new
chr14	24368069	24369828	chr14:24368069-24369828	0	+	24368340	24369828	789624	3	100,129,330,	0,242,1429,
#Partially deleted in new
chr14	24368185	24372586	chr14:24368185-24372586	0	+	24368340	24372586	789624	3	255,172,146,	0,1313,4255,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	24368185	24374707	chr14:24368185-24374707	0	+	24368185	24368185	8553170	5	255,172,163,200,1013,	0,1313,4255,4985,5509,
#Partially deleted in new
chr14	24368199	24379604	chr14:24368199-24379604	3	+	24368340	24377705	0	10	241,1096,163,200,173,141,56,127,585,1967,	0,1299,4241,4971,5495,6126,7460,7775,8094,9438,
#Partially deleted in new
chr14	24368340	24379604	chr14:24368340-24379604	1	+	24368340	24376943	0	9	100,1096,163,200,173,141,56,127,3311,	0,1158,4100,4830,5354,5985,7319,7634,7953,
#Deleted in new
chr14	24368998	24370057	chr14:24368998-24370057	0	+	24369312	24370057	789624	2	345,559,	0,500,
#Partially deleted in new
chr14	24369081	24377728	chr14:24369081-24377728	1	+	24369608	24377705	0	10	75,1096,163,200,173,141,56,127,585,91,	0,417,3359,4089,4613,5244,6578,6893,7212,8556,
#Partially deleted in new
chr14	24369152	24379604	chr14:24369152-24379604	1	+	24369312	24376943	0	9	224,1096,163,200,173,141,56,127,3311,	0,346,3288,4018,4542,5173,6507,6822,7141,
#Partially deleted in new
chr14	24369152	24377705	chr14:24369152-24377705	1	+	24369608	24377705	0	9	1442,163,200,173,141,56,127,585,68,	0,3288,4018,4542,5173,6507,6822,7141,8485,
#Partially deleted in new
chr14	24369152	24377705	chr14:24369152-24377705	1	+	24369608	24377705	0	9	1442,163,200,173,141,56,127,261,68,	0,3288,4018,4542,5173,6507,6822,7141,8485,
#Partially deleted in new
chr14	24369152	24377705	chr14:24369152-24377705	1	+	24369312	24377705	0	10	224,1096,163,200,173,141,56,127,261,68,	0,346,3288,4018,4542,5173,6507,6822,7141,8485,
#Partially deleted in new
chr14	24369152	24379604	chr14:24369152-24379604	1	+	24369608	24376943	0	8	1442,163,200,173,141,56,127,3311,	0,3288,4018,4542,5173,6507,6822,7141,
#Partially deleted in new
chr14	24369166	24378055	chr14:24369166-24378055	1	+	24369312	24377705	0	10	210,1096,163,200,173,141,56,127,585,418,	0,332,3274,4004,4528,5159,6493,6808,7127,8471,
#Partially deleted in new
chr14	24369244	24376008	chr14:24369244-24376008	0	+	24369244	24369244	8553170	7	99,1096,163,200,772,56,34,	0,254,3196,3926,4450,6415,6730,
#Partially deleted in new
chr14	24372814	24377705	chr14:24372814-24377705	1	+	24373206	24377705	0	7	556,173,141,56,127,261,68,	0,880,1511,2845,3160,3479,4823,
#Partially deleted in new
chr14	24372814	24379604	chr14:24372814-24379604	1	+	24373206	24376943	0	6	556,173,141,56,127,3311,	0,880,1511,2845,3160,3479,
#Partially deleted in new
chr14	24372814	24378024	chr14:24372814-24378024	1	+	24373206	24377705	0	7	556,173,141,56,127,585,387,	0,880,1511,2845,3160,3479,4823,
#Partially deleted in new
chr14	24374122	24378001	chr14:24374122-24378001	1	+	24376373	24376943	0	4	344,56,127,1708,	0,1537,1852,2171,
#Partially deleted in new
chr14	24374122	24378001	chr14:24374122-24378001	1	+	24376373	24377705	0	5	344,56,127,585,364,	0,1537,1852,2171,3515,
#Partially deleted in new
chr14	24374122	24377705	chr14:24374122-24377705	1	+	24376373	24377705	0	5	344,56,127,261,68,	0,1537,1852,2171,3515,
#Deleted in new
chr14	24376073	24378056	chr14:24376073-24378056	0	+	24376073	24376073	8553170	2	28,419,	0,1564,
#Partially deleted in new
chr14	24398785	24419288	chr14:24398785-24419288	3	+	24399246	24417446	789624	9	301,215,659,1557,131,97,102,102,4693,	0,444,9083,9866,12290,12568,14211,14530,15810,
#Deleted in new
chr14	24412593	24414718	chr14:24412593-24414718	0	+	24412593	24412593	8553170	4	98,102,102,123,	0,403,722,2002,
#Deleted in new
chr14	24426531	24429525	chr14:24426531-24429525	3	-	24427788	24429054	789624	3	1455,120,771,	0,1754,2223,
#Deleted in new
chr14	24427604	24430954	chr14:24427604-24430954	1	-	24427788	24430885	789624	3	382,120,216,	0,681,3134,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	24429285	24441834	chr14:24429285-24441834	3	+	24430730	24437285	0	8	122,218,1148,131,97,108,102,4799,	0,1428,2177,3436,3650,6786,7102,7750,
#Partially deleted in new
chr14	24429934	24437617	chr14:24429934-24437617	1	+	24430730	24437285	0	8	57,218,1148,131,97,108,102,582,	0,779,1528,2787,3001,6137,6453,7101,
#Partially deleted in new
chr14	24429937	24438408	chr14:24429937-24438408	1	+	24430730	24437285	0	8	182,218,1148,131,97,108,102,1373,	0,776,1525,2784,2998,6134,6450,7098,
#Deleted in new
chr14	24430223	24431665	chr14:24430223-24431665	0	+	24430730	24431665	789624	2	708,203,	0,1239,
#Partially deleted in new
chr14	24432793	24437425	chr14:24432793-24437425	1	+	24436159	24437285	789624	5	59,97,112,102,390,	0,142,3274,3594,4242,
#Deleted in new
chr14	24435456	24438408	chr14:24435456-24438408	0	+	24435456	24435456	8553170	3	723,102,1373,	0,931,1579,
#Partially deleted in new
chr14	24439765	24442803	chr14:24439765-24442803	3	-	24440082	24442769	789624	6	727,144,122,83,107,50,	0,1017,1908,2412,2580,2988,
#Partially deleted in new
chr14	24439765	24442776	chr14:24439765-24442776	0	-	24439765	24439765	8553170	5	727,144,122,83,431,	0,1017,1908,2412,2580,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	24439767	24442776	chr14:24439767-24442776	0	-	24439767	24439767	8553170	4	725,144,1444,23,	0,1015,1241,2986,
#Partially deleted in new
chr14	24439778	24442858	chr14:24439778-24442858	1	-	24440082	24440589	789624	6	823,144,122,83,107,46,	0,1004,1895,2399,2567,3034,
#Partially deleted in new
chr14	24439779	24442776	chr14:24439779-24442776	0	-	24439779	24439779	8553170	3	713,144,1103,	0,1003,1894,
#Partially deleted in new
chr14	24439781	24442448	chr14:24439781-24442448	1	-	24440082	24442259	789624	4	711,144,83,103,	0,1001,2396,2564,
#Partially deleted in new
chr14	24439784	24442694	chr14:24439784-24442694	1	-	24440082	24442101	789624	4	708,144,163,349,	0,998,2313,2561,
#Partially deleted in new
chr14	24439796	24442453	chr14:24439796-24442453	0	-	24439796	24439796	8553170	3	696,144,356,	0,986,2301,
#Partially deleted in new
chr14	24439901	24442765	chr14:24439901-24442765	1	-	24440082	24440463	789624	5	591,144,122,107,12,	0,881,1772,2444,2852,
#Deleted in new
chr14	24440038	24440976	chr14:24440038-24440976	0	-	24440038	24440038	8553170	2	454,194,	0,744,
#Deleted in new
chr14	24440100	24440926	chr14:24440100-24440926	0	-	24440100	24440100	8553170	2	308,144,	0,682,
#Partially deleted in new
chr14	24440137	24442375	chr14:24440137-24442375	0	-	24440137	24442118	789624	4	355,144,152,30,	0,645,1971,2208,
#Partially deleted in new
chr14	24440137	24442759	chr14:24440137-24442759	0	-	24440137	24440137	8553170	4	355,144,122,582,	0,645,1536,2040,
#Partially deleted in new
chr14	24440176	24442453	chr14:24440176-24442453	0	-	24440176	24440463	789624	5	316,144,118,83,108,	0,606,1501,2001,2169,
#Partially deleted in new
chr14	24440176	24442441	chr14:24440176-24442441	0	-	24440176	24442441	789624	3	316,144,96,	0,606,2169,
#Partially deleted in new
chr14	24440203	24442266	chr14:24440203-24442266	0	-	24440203	24440589	789624	3	723,122,89,	0,1470,1974,
#Partially deleted in new
chr14	24440263	24442437	chr14:24440263-24442437	0	-	24440263	24440463	789624	5	229,144,118,152,92,	0,519,1414,1845,2082,
#Partially deleted in new
chr14	24440785	24442904	chr14:24440785-24442904	0	-	24440785	24440785	8553170	4	141,83,107,87,	0,1392,1560,2032,
#Partially deleted in new
chr14	24440853	24442677	chr14:24440853-24442677	0	-	24440853	24440853	8553170	3	73,122,580,	0,820,1244,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	24441291	24442281	chr14:24441291-24442281	0	-	24441291	24441291	8553170	2	504,104,	0,886,
#Deleted in new
chr14	24442323	24442905	chr14:24442323-24442905	0	-	24442323	24442323	8553170	2	129,88,	0,494,
#Partially deleted in new
chr14	24501593	24508688	chr14:24501593-24508688	3	+	24501593	24501593	8553170	2	143,555,	0,6540,
#Deleted in new
chr14	24505352	24508265	chr14:24505352-24508265	3	-	24505515	24508235	0	5	307,255,136,151,88,	0,675,1116,2003,2825,
#Deleted in new
chr14	24505505	24508265	chr14:24505505-24508265	1	-	24505515	24506480	0	4	154,255,136,88,	0,522,963,2672,
#Deleted in new
chr14	24573521	24576250	chr14:24573521-24576250	0	-	24573521	24573521	8553170	4	289,255,738,82,	0,723,1153,2647,
#Deleted in new
chr14	24573555	24576260	chr14:24573555-24576260	3	-	24573636	24576223	0	5	255,255,136,148,92,	0,689,1119,1709,2613,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	24595722	24634492	chr14:24595722-24634492	1	+	24595722	24595722	8553170	3	280,159,197,	0,27245,38573,
#Deleted in new
chr14	24606479	24609658	chr14:24606479-24609658	3	-	24606602	24609613	0	5	267,258,136,148,100,	0,669,1132,1785,3079,
#Deleted in new
chr14	24606484	24609699	chr14:24606484-24609699	1	-	24606602	24609613	0	4	262,136,148,141,	0,1127,1780,3074,
#Deleted in new
chr14	24606484	24609667	chr14:24606484-24609667	1	-	24606602	24609613	789624	3	262,149,109,	0,1779,3074,
#Deleted in new
chr14	24630953	24634267	chr14:24630953-24634267	3	-	24631070	24634160	0	5	261,261,136,148,162,	0,904,1370,1961,3152,
#Deleted in new
chr14	24630953	24634209	chr14:24630953-24634209	1	-	24631070	24634111	789624	5	261,261,136,161,104,	0,904,1370,1961,3152,
#Deleted in new
chr14	24630970	24634267	chr14:24630970-24634267	1	-	24631070	24634160	789624	5	244,261,1,148,162,	0,887,1748,1944,3135,
#Deleted in new
chr14	24630970	24634160	chr14:24630970-24634160	1	-	24631070	24634160	789624	3	244,264,51,	0,887,3139,
#Deleted in new
chr14	24631013	24634160	chr14:24631013-24634160	1	-	24631070	24634160	789624	4	201,262,148,55,	0,844,1901,3092,
#Deleted in new
chr14	24631013	24634160	chr14:24631013-24634160	0	-	24632065	24634160	789624	3	201,261,55,	0,844,3092,
#Deleted in new
chr14	24631013	24634160	chr14:24631013-24634160	0	-	24632048	24634160	789624	4	201,261,148,55,	0,844,1901,3092,
#Deleted in new
chr14	24631163	24634174	chr14:24631163-24634174	0	-	24633040	24634111	789624	6	51,261,136,148,107,69,	0,694,1160,1751,2746,2942,
#Deleted in new
chr14	24631538	24634196	chr14:24631538-24634196	1	-	24632048	24634160	789624	3	580,148,91,	0,1376,2567,
#Partially deleted in new
chr14	24809655	25050064	chr14:24809655-25050064	1	-	24812708	24974818	789624	7	3077,158,166,131,186,116,187,	0,9381,46280,47371,165009,200869,240222,
#Partially deleted in new
chr14	24809661	25050297	chr14:24809661-25050297	3	-	24812708	24974818	789624	6	3071,158,166,131,186,420,	0,9375,46274,47365,165003,240216,
#Partially deleted in new
chr14	24812086	25049889	chr14:24812086-25049889	1	-	24812708	24974818	789624	6	646,158,166,131,186,683,	0,6950,43849,44940,162578,237120,
#Partially deleted in new
chr14	24812191	25049000	chr14:24812191-25049000	1	-	24812708	24974818	789624	6	541,158,166,131,186,41,	0,6845,43744,44835,162473,236768,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	24812299	25010640	chr14:24812299-25010640	1	-	24812708	24974818	789624	7	433,158,166,131,186,121,116,	0,6737,43636,44727,162365,182564,198225,
#Partially deleted in new
chr14	24812491	24819477	chr14:24812491-24819477	1	-	24812708	24819339	789624	2	241,441,	0,6545,
#Partially deleted in new
chr14	24815661	25049894	chr14:24815661-25049894	0	-	24878769	24974818	789624	8	2448,158,166,131,162,186,87,17,	0,3375,40274,41365,62990,159003,172224,234216,
#Partially deleted in new
chr14	25124486	25126998	chr14:25124486-25126998	3	-	25124486	25124486	8553170	2	204,81,	0,2431,
#Partially deleted in new
chr14	25267063	25267336	chr14:25267063-25267336	7	-	25267063	25267063	16724991	1	273,	0,
#Deleted in new
chr14	25357763	25358689	chr14:25357763-25358689	7	+	25357763	25357763	16724991	1	926,	0,
#Partially deleted in new
chr14	25431192	25432234	chr14:25431192-25432234	7	-	25431192	25431192	16724991	1	1042,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	25647303	26143305	chr14:25647303-26143305	3	-	25647303	25647303	8553170	10	1954,107,82,68,241,125,83,71,59,199,	0,2495,13542,16179,17431,188546,189825,191156,478853,495803,
#Deleted in new
chr14	25806647	25806712	chr14:25806647-25806712	3	-	25806647	25806647	8553170	1	65,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	25820365	25822741	chr14:25820365-25822741	3	+	25820365	25820365	8553170	1	2376,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	25916014	25998805	chr14:25916014-25998805	3	+	25916014	25916014	8553170	3	3407,707,418,	0,4464,82373,
#Deleted in new
chr14	26208035	26208424	chr14:26208035-26208424	7	+	26208035	26208035	16724991	1	389,	0,
#Partially deleted in new
chr14	26443092	26597519	chr14:26443092-26597519	0	-	26549695	26597436	789624	6	5871,72,167,102,144,219,	0,29227,36884,106587,152317,154208,
#Partially deleted in new
chr14	26445887	26597486	chr14:26445887-26597486	1	-	26447958	26597436	789624	4	3076,167,144,186,	0,34089,149522,151413,
#Partially deleted in new
chr14	26445888	26597754	chr14:26445888-26597754	3	-	26447958	26597436	789624	5	3075,72,167,144,454,	0,26431,34088,149521,151412,
#Partially deleted in new
chr14	26448527	26596075	chr14:26448527-26596075	0	-	26448527	26595948	789624	5	436,72,167,144,140,	0,23792,31449,146882,147408,
#Partially deleted in new
chr14	26448717	26595499	chr14:26448717-26595499	0	-	26448717	26480057	789624	4	246,167,46,90,	0,31259,119702,146692,
#Partially deleted in new
chr14	26448733	26595473	chr14:26448733-26595473	0	-	26549695	26595473	789624	4	230,167,102,64,	0,31243,100946,146676,
#Partially deleted in new
chr14	26448827	26595626	chr14:26448827-26595626	0	-	26448827	26480057	789624	4	136,72,167,217,	0,23492,31149,146582,
#Partially deleted in new
chr14	26448851	26597082	chr14:26448851-26597082	0	-	26448851	26596597	789624	5	112,72,167,144,510,	0,23468,31125,146558,147721,
#Partially deleted in new
chr14	26470117	26597440	chr14:26470117-26597440	1	-	26470463	26597436	789624	5	373,72,167,144,140,	0,2202,9859,125292,127183,
#Partially deleted in new
chr14	26471950	26597495	chr14:26471950-26597495	1	-	26472202	26597436	789624	4	441,167,144,195,	0,8026,123459,125350,
#Partially deleted in new
chr14	26479016	26597460	chr14:26479016-26597460	1	-	26479964	26597436	789624	3	1127,144,160,	0,116393,118284,
#Partially deleted in new
chr14	26519198	26595461	chr14:26519198-26595461	0	-	26519198	26519198	8553170	3	356,80,52,	0,69201,76211,
#Partially deleted in new
chr14	26549350	26595478	chr14:26549350-26595478	0	-	26549350	26549350	8553170	2	431,69,	0,46059,
#Deleted in new
chr14	26592746	26594517	chr14:26592746-26594517	3	-	26592746	26592746	8553170	1	1771,	0,
#Partially deleted in new
chr14	26598411	26664407	chr14:26598411-26664407	3	+	26598411	26598411	8553170	4	137,139,174,368,	0,38783,65201,65628,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	26637240	26806381	chr14:26637240-26806381	0	+	26637240	26637240	8553170	4	93,93,117,146,	0,93823,160673,168995,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	26735353	26806467	chr14:26735353-26806467	0	+	26735353	26735353	8553170	4	19,85,117,232,	0,44441,62560,70882,
#Partially deleted in new
chr14	26775494	26822107	chr14:26775494-26822107	3	-	26775494	26775494	789624	4	205,89,99,104,	0,33227,45197,46509,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	26782167	26806467	chr14:26782167-26806467	1	+	26782167	26782167	8553170	4	41,78,117,232,	0,15323,15746,24068,
#Partially deleted in new
chr14	26809416	26820703	chr14:26809416-26820703	1	+	26809416	26809416	789624	5	24,164,127,77,182,	0,2816,7503,9287,11105,
#Partially deleted in new
chr14	26816967	26836458	chr14:26816967-26836458	3	+	26816967	26816967	8553170	3	79,87,192,	0,10749,19299,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	26836727	26933772	chr14:26836727-26933772	1	+	26836727	26836727	8553170	3	75,126,276,	0,6803,96769,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	26843451	27160420	chr14:26843451-27160420	3	+	26843451	26843451	8553170	6	205,63,63,24,69,144,	0,233786,262259,288796,290518,316825,
#Partially deleted in new
chr14	26873132	26914743	chr14:26873132-26914743	3	+	26873132	26873132	789624	4	162,146,127,387,	0,264,1647,41224,
#Deleted in new
chr14	26873162	26873652	chr14:26873162-26873652	0	+	26873162	26873162	8553170	2	132,256,	0,234,
#Deleted in new
chr14	26908641	26908725	chr14:26908641-26908725	3	+	26908641	26908641	5263520	1	84,	0,
#Partially deleted in new
chr14	27258716	27259166	chr14:27258716-27259166	5	-	27258716	27258716	16724991	1	450,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	27259141	27673230	chr14:27259141-27673230	4	-	27259141	27259141	16724991	6	41,105,124,142,60,202,	0,636,51881,62858,397301,413887,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	27321825	27673221	chr14:27321825-27673221	4	-	27321825	27321825	16724991	3	316,60,193,	0,334617,351203,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	27321921	27673221	chr14:27321921-27673221	4	-	27321921	27321921	16724991	3	220,165,193,	0,334416,351107,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	27612587	27639636	chr14:27612587-27639636	0	+	27612587	27612587	8553170	4	90,76,101,3217,	0,833,21656,23832,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	27612610	27639636	chr14:27612610-27639636	3	+	27612610	27612610	789624	5	67,76,51,101,3217,	0,810,7212,21633,23809,
#Deleted in new
chr14	27633204	27633278	chr14:27633204-27633278	3	-	27633204	27633204	5263520	1	74,	0,
#Deleted in new
chr14	27634124	27636669	chr14:27634124-27636669	0	+	27634124	27634124	8553170	2	220,250,	0,2295,
#Deleted in new
chr14	28264389	28265974	chr14:28264389-28265974	7	+	28264389	28264389	16724991	1	1585,	0,
#Deleted in new
chr14	28264553	28265133	chr14:28264553-28265133	5	+	28264553	28264553	16724991	1	580,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	28318140	28418612	chr14:28318140-28418612	3	+	28318140	28318140	8553170	3	392,47,69,	0,87285,100403,
#Deleted in new
chr14	28489909	28490362	chr14:28489909-28490362	7	+	28489909	28489909	16724991	1	453,	0,
#Partially deleted in new
chr14	28592222	28613623	chr14:28592222-28613623	3	-	28592222	28592222	8553170	3	343,157,165,	0,20099,21236,
#Deleted in new
chr14	28593778	28593919	chr14:28593778-28593919	7	+	28593778	28593778	16724991	1	141,	0,
#Deleted in new
chr14	28673240	28673727	chr14:28673240-28673727	7	-	28673240	28673240	16724991	1	487,	0,
#Partially deleted in new
chr14	28729082	28765277	chr14:28729082-28765277	3	-	28729082	28729082	8553170	4	169,155,143,135,	0,319,33249,36060,
#Partially deleted in new
chr14	28729509	28765263	chr14:28729509-28765263	1	-	28729509	28729509	8553170	5	47,118,126,143,104,	0,9217,12324,32822,35650,
#Partially deleted in new
chr14	28735002	28765277	chr14:28735002-28765277	0	-	28735002	28735002	8553170	5	28,118,126,143,118,	0,3724,6831,27329,30157,
#Deleted in new
chr14	28760329	28765747	chr14:28760329-28765747	0	+	28760329	28760329	8553170	2	30,70,	0,5348,
#Deleted in new
chr14	28764319	28765742	chr14:28764319-28765742	0	+	28764319	28764319	8553170	2	82,65,	0,1358,
#Deleted in new
chr14	28764585	28765801	chr14:28764585-28765801	0	+	28764585	28764585	8553170	2	42,124,	0,1092,
#Deleted in new
chr14	28764660	28765694	chr14:28764660-28765694	0	+	28764660	28764660	8553170	2	83,17,	0,1017,
#Deleted in new
chr14	28764728	28765755	chr14:28764728-28765755	0	+	28764728	28764728	8553170	2	94,78,	0,949,
#Deleted in new
chr14	28765089	28765699	chr14:28765089-28765699	0	+	28765089	28765089	8553170	2	89,22,	0,588,
#Deleted in new
chr14	28765149	28765743	chr14:28765149-28765743	0	+	28765149	28765149	8553170	2	92,66,	0,528,
#Deleted in new
chr14	28765387	28770277	chr14:28765387-28770277	3	+	28767279	28768749	789624	1	4890,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	28772703	28793234	chr14:28772703-28793234	3	+	28772703	28772703	5263520	3	152,74,1355,	0,656,19176,
#Deleted in new
chr14	28772784	28778560	chr14:28772784-28778560	1	+	28772784	28772784	5263520	4	71,74,134,455,	0,575,5073,5321,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	28772794	28813453	chr14:28772794-28813453	0	+	28772794	28772794	8553170	3	61,74,481,	0,565,40178,
#Deleted in new
chr14	28783490	28785787	chr14:28783490-28785787	3	-	28783490	28783490	789624	2	1477,178,	0,2119,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	28785870	28792803	chr14:28785870-28792803	1	+	28785870	28785870	8553170	3	71,50,334,	0,617,6599,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	28800083	28830204	chr14:28800083-28830204	3	-	28800083	28800083	8553170	4	126,78,92,79,	0,19516,24772,30042,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	28818740	28819258	chr14:28818740-28819258	3	+	28818740	28818740	8553170	1	518,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	28830243	28842337	chr14:28830243-28842337	0	+	28830243	28830243	8553170	4	259,55,78,385,	0,1762,7009,11709,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	28830246	28837717	chr14:28830246-28837717	0	+	28830246	28830246	8553170	3	256,55,465,	0,1759,7006,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	28830247	28968400	chr14:28830247-28968400	1	+	28830247	28830247	8553170	6	255,55,78,114,55,328,	0,1758,7005,40055,99692,137825,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	28830249	28837658	chr14:28830249-28837658	1	+	28830249	28830249	8553170	4	253,55,24,406,	0,1756,4547,7003,
#Partially deleted in new
chr14	28830444	28842082	chr14:28830444-28842082	0	+	28830444	28830444	8553170	5	58,55,24,78,279,	0,1561,4352,6808,11359,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	28857383	28858701	chr14:28857383-28858701	7	-	28857383	28857383	16724991	1	1318,	0,
#Partially deleted in new
chr14	28875403	29032782	chr14:28875403-29032782	3	-	28875403	28875403	8553170	5	822,70,59,186,47,	0,29812,154036,155116,157332,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	28931569	28968392	chr14:28931569-28968392	3	+	28931569	28931569	8553170	3	53,99,320,	0,33634,36503,
#Partially deleted in new
chr14	28975835	29064993	chr14:28975835-29064993	1	-	28975835	28975835	8553170	8	403,105,126,186,42,59,117,57,	0,1301,3057,54684,56900,65532,87194,89101,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	28982302	28982410	chr14:28982302-28982410	3	-	28982302	28982302	8553170	1	108,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	29264380	29378656	chr14:29264380-29378656	3	-	29264380	29264380	8553170	4	529,41,100,364,	0,3353,10301,113912,
#Partially deleted in new
chr14	29264843	29378560	chr14:29264843-29378560	1	-	29264843	29264843	8553170	5	66,41,100,90,268,	0,2890,9838,42537,113449,
#Partially deleted in new
chr14	29267591	29381295	chr14:29267591-29381295	0	-	29267591	29267591	8553170	5	183,100,81,164,115,	0,7090,78853,110701,113589,
#Partially deleted in new
chr14	29390073	29436412	chr14:29390073-29436412	3	+	29390073	29390073	8553170	3	404,161,236,	0,6534,46103,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	29390345	29436412	chr14:29390345-29436412	1	+	29390345	29390345	8553170	4	132,161,118,236,	0,6262,18502,45831,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	29476783	29476912	chr14:29476783-29476912	3	+	29476783	29476783	8553170	1	129,	0,
#Partially deleted in new
chr14	29576478	29927512	chr14:29576478-29927512	1	-	29577237	29927512	789624	19	978,86,268,99,162,107,73,53,280,78,124,205,78,211,161,132,139,8,256,	0,1796,21012,22548,23177,47673,50005,52562,54263,56390,57939,59811,62010,62215,87220,89598,149057,174687,350778,
#Partially deleted in new
chr14	29576480	29927742	chr14:29576480-29927742	3	-	29577237	29927512	789624	18	976,86,268,99,162,107,73,53,280,78,124,205,78,211,161,132,139,494,	0,1794,21010,22546,23175,47671,50003,52560,54261,56388,57937,59809,62008,62213,87218,89596,149055,350768,
#Partially deleted in new
chr14	29576941	29927642	chr14:29576941-29927642	1	-	29577237	29927512	789624	19	515,86,268,99,162,107,73,53,280,78,124,205,78,211,24,161,132,139,394,	0,1333,20549,22085,22714,47210,49542,52099,53800,55927,57476,59348,61547,61752,79534,86757,89135,148594,350307,
#Partially deleted in new
chr14	29591114	29597668	chr14:29591114-29597668	0	-	29594104	29597668	789624	4	175,55,84,178,	0,1585,2971,6376,
#Partially deleted in new
chr14	29630571	29634474	chr14:29630571-29634474	0	-	29630682	29634474	789624	3	450,78,57,	0,2297,3846,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	29636442	29650520	chr14:29636442-29650520	0	-	29636442	29636442	8553170	4	52,78,211,219,	0,2046,2251,13859,
#Partially deleted in new
chr14	29638295	29666158	chr14:29638295-29666158	0	-	29638295	29638295	8553170	5	271,211,24,161,82,	0,398,18180,25403,27781,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	29638522	29657844	chr14:29638522-29657844	0	-	29638522	29638522	8553170	4	44,211,24,268,	0,171,17953,19054,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	29652808	29657916	chr14:29652808-29657916	3	+	29652808	29652808	8553170	2	46,505,	0,4603,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	29663811	30191898	chr14:29663811-30191898	0	-	29663811	30047742	789624	6	48,132,139,78,152,33,	0,2265,61724,383898,527487,528054,
#Deleted in new
chr14	29811915	29812018	chr14:29811915-29812018	3	+	29811915	29811915	8553170	1	103,	0,
#Partially deleted in new
chr14	29952396	29980254	chr14:29952396-29980254	0	-	29952396	29952396	8553170	2	127,106,	0,27752,
#Deleted in new
chr14	30055209	30055954	chr14:30055209-30055954	7	+	30055209	30055209	16724991	1	745,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	30167833	30297043	chr14:30167833-30297043	1	-	30167833	30167833	8553170	4	524,122,207,69,	0,36098,37700,129141,
#Deleted in new
chr14	30370107	30373115	chr14:30370107-30373115	3	+	30370107	30370107	8553170	1	3008,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	30437991	30573629	chr14:30437991-30573629	3	-	30437991	30437991	8553170	3	180,99,123,	0,122745,135515,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	30438005	30474227	chr14:30438005-30474227	0	-	30438005	30438005	8553170	3	166,78,227,	0,35516,35995,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	30519160	30519318	chr14:30519160-30519318	3	+	30519160	30519160	8553170	1	158,	0,
#Partially deleted in new
chr14	30541775	30542188	chr14:30541775-30542188	7	-	30541775	30541775	16724991	1	413,	0,
#Partially deleted in new
chr14	30559122	30620063	chr14:30559122-30620063	3	+	30581079	30616534	789624	15	150,41,98,102,125,166,107,117,125,133,308,182,173,191,3786,	0,21953,27595,30260,33200,34351,38297,39360,42647,42876,46382,48765,53084,56226,57155,
#Partially deleted in new
chr14	30559157	30616669	chr14:30559157-30616669	1	+	30589385	30616534	789624	14	115,98,102,125,166,107,117,125,133,308,182,173,191,392,	0,27560,30225,33165,34316,38262,39325,42612,42841,46347,48730,53049,56191,57120,
#Partially deleted in new
chr14	30559157	30607919	chr14:30559157-30607919	0	+	30559157	30559157	8553170	9	115,98,102,125,166,107,125,133,32,	0,27560,30225,33165,34316,38262,42612,42841,48730,
#Partially deleted in new
chr14	30559157	30592447	chr14:30559157-30592447	0	+	30581079	30592447	789624	6	115,84,41,98,102,125,	0,21706,21918,27560,30225,33165,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	30559159	30590963	chr14:30559159-30590963	0	+	30559159	30559159	8553170	5	113,41,98,102,432,	0,21916,27558,30223,31372,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr14	30559221	30618225	chr14:30559221-30618225	0	+	30581079	30602676	8553170	16	51,41,98,102,125,166,107,117,125,133,259,308,182,173,191,1948,	0,21854,27496,30161,33101,34252,38198,39261,42548,42777,43409,46283,48666,52985,56127,57056,
#Partially deleted in new
chr14	30559309	30616672	chr14:30559309-30616672	1	+	30560756	30616534	789624	15	1533,41,98,102,125,166,107,117,125,133,308,182,173,191,395,	0,21766,27408,30073,33013,34164,38110,39173,42460,42689,46195,48578,52897,56039,56968,
#Partially deleted in new
chr14	30574534	30593504	chr14:30574534-30593504	0	+	30581079	30593504	789624	7	56,84,41,98,102,125,31,	0,6329,6541,12183,14848,17788,18939,
#Partially deleted in new
chr14	30577755	30593639	chr14:30577755-30593639	0	+	30581079	30593639	789624	6	91,41,98,102,125,166,	0,3320,8962,11627,14567,15718,
#Partially deleted in new
chr14	30577760	30589484	chr14:30577760-30589484	0	+	30581079	30589484	789624	5	86,84,41,98,102,	0,3103,3315,8957,11622,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	30592322	30598288	chr14:30592322-30598288	0	+	30592322	30592322	8553170	4	125,166,107,189,	0,1151,5097,5777,
#Partially deleted in new
chr14	30593591	30605565	chr14:30593591-30605565	0	+	30593591	30605565	789624	4	48,125,133,61,	0,8178,8407,11913,
#Partially deleted in new
chr14	30598557	30615515	chr14:30598557-30615515	0	+	30598557	30612210	789624	5	42,125,133,173,167,	0,3212,3441,13649,16791,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	30611301	30618232	chr14:30611301-30618232	0	+	30611301	30611301	8553170	3	1078,191,1955,	0,4047,4976,
#Partially deleted in new
chr14	30622111	30735812	chr14:30622111-30735812	3	+	30622338	30735609	789624	25	288,71,89,91,123,88,90,56,86,100,140,91,74,82,97,71,80,63,76,54,53,34,66,69,227,	0,6097,8365,11835,16013,17665,21204,27416,28453,31377,48144,51145,51812,52872,72661,78076,80184,83711,85878,93812,97213,99772,100382,112678,113474,
#Partially deleted in new
chr14	30622310	30715970	chr14:30622310-30715970	0	+	30622338	30643372	789624	18	89,71,89,88,90,139,56,86,100,140,91,74,82,97,71,80,63,47,	0,5898,8166,17466,21005,21569,27217,28254,31178,47945,50946,51613,52673,72462,77877,79985,83512,93613,
#Partially deleted in new
chr14	30622318	30735692	chr14:30622318-30735692	0	+	30622338	30633961	789624	24	81,71,91,123,88,90,56,86,100,140,91,74,82,97,71,80,63,76,54,53,34,66,69,107,	0,5890,11628,15806,17458,20997,27209,28246,31170,47937,50938,51605,52665,72454,77869,79977,83504,85671,93605,97006,99565,100175,112471,113267,
#Partially deleted in new
chr14	30622318	30735799	chr14:30622318-30735799	0	+	30630545	30634851	789624	25	81,89,91,240,123,88,90,56,86,100,140,91,74,82,97,71,80,63,76,54,53,34,66,69,214,	0,8158,11628,12476,15806,17458,20997,27209,28246,31170,47937,50938,51605,52665,72454,77869,79977,83504,85671,93605,97006,99565,100175,112471,113267,
#Partially deleted in new
chr14	30622318	30735789	chr14:30622318-30735789	1	+	30630545	30735609	789624	24	81,89,91,123,88,90,56,86,100,140,91,74,82,97,71,80,63,76,54,53,34,66,69,204,	0,8158,11628,15806,17458,20997,27209,28246,31170,47937,50938,51605,52665,72454,77869,79977,83504,85671,93605,97006,99565,100175,112471,113267,
#Partially deleted in new
chr14	30622318	30735791	chr14:30622318-30735791	0	+	30622338	30643322	789624	22	81,71,89,90,56,86,100,140,91,74,82,97,71,80,63,76,54,53,34,66,69,206,	0,5890,8158,20997,27209,28246,31170,47937,50938,51605,52665,72454,77869,79977,83504,85671,93605,97006,99565,100175,112471,113267,
#Partially deleted in new
chr14	30622319	30638173	chr14:30622319-30638173	0	+	30628222	30634963	789624	6	143,71,89,91,113,49,	0,5889,8157,11627,12602,15805,
#Partially deleted in new
chr14	30622326	30735772	chr14:30622326-30735772	0	+	30622338	30643372	789624	24	73,71,89,91,123,90,56,86,100,140,91,74,82,97,71,80,63,76,54,53,34,66,69,187,	0,5882,8150,11620,15798,20989,27201,28238,31162,47929,50930,51597,52657,72446,77861,79969,83496,85663,93597,96998,99557,100167,112463,113259,
#Partially deleted in new
chr14	30622327	30649583	chr14:30622327-30649583	0	+	30628222	30649583	789624	8	135,71,89,91,123,88,90,56,	0,5881,8149,11619,15797,17449,20988,27200,
#Partially deleted in new
chr14	30622328	30650626	chr14:30622328-30650626	0	+	30639818	30650626	789624	6	71,123,88,90,56,62,	0,15796,17448,20987,27199,28236,
#Partially deleted in new
chr14	30622331	30735791	chr14:30622331-30735791	1	+	30634001	30735609	789624	23	131,91,123,88,90,56,86,100,140,91,74,82,97,71,80,63,76,54,53,34,66,69,206,	0,11615,15793,17445,20984,27196,28233,31157,47924,50925,51592,52652,72441,77856,79964,83491,85658,93592,96993,99552,100162,112458,113254,
#Partially deleted in new
chr14	30628208	30653588	chr14:30628208-30653588	0	+	30628208	30643372	789624	7	71,89,91,90,56,86,100,	0,2268,5738,15107,21319,22356,25280,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	30628208	30630917	chr14:30628208-30630917	0	+	30628208	30628208	8553170	2	71,441,	0,2268,
#Partially deleted in new
chr14	30638196	30653981	chr14:30638196-30653981	0	+	30638196	30638196	8553170	6	51,88,90,56,86,493,	0,1580,5119,11331,12368,15292,
#Partially deleted in new
chr14	30639776	30658358	chr14:30639776-30658358	0	+	30639776	30658097	789624	6	88,90,56,86,100,276,	0,3539,9751,10788,13712,18306,
#Partially deleted in new
chr14	30652337	30694858	chr14:30652337-30694858	0	+	30652337	30652337	8553170	7	35,100,140,91,74,82,86,	0,1151,17918,20919,21586,22646,42435,
#Partially deleted in new
chr14	30669762	30673994	chr14:30669762-30673994	0	+	30669762	30669762	8553170	3	633,91,71,	0,3494,4161,
#Partially deleted in new
chr14	30673272	30675331	chr14:30673272-30675331	0	+	30673272	30673272	8553170	3	75,74,348,	0,651,1711,
#Partially deleted in new
chr14	30676125	30705885	chr14:30676125-30705885	0	+	30676125	30676125	8553170	5	508,97,71,80,63,	0,18647,24062,26170,29697,
#Deleted in new
chr14	30683044	30683598	chr14:30683044-30683598	7	-	30683044	30683044	16724991	1	554,	0,
#Partially deleted in new
chr14	30705823	30735799	chr14:30705823-30735799	0	+	30705823	30707862	789624	9	62,60,76,54,53,34,66,69,214,	0,1993,2166,10100,13501,16060,16670,28966,29762,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	30715297	30735657	chr14:30715297-30735657	0	+	30715297	30715297	8553170	6	680,53,34,66,69,72,	0,4027,6586,7196,19492,20288,
#Partially deleted in new
chr14	30721701	30735662	chr14:30721701-30735662	0	+	30721701	30721701	8553170	4	216,66,69,77,	0,792,13088,13884,
#Deleted in new
chr14	30721725	30722842	chr14:30721725-30722842	0	+	30721725	30721725	8553170	2	192,349,	0,768,
#Partially deleted in new
chr14	30734493	30735794	chr14:30734493-30735794	0	+	30734493	30734493	8553170	2	365,209,	0,1092,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	30734925	30822702	chr14:30734925-30822702	3	-	30734925	30734925	8553170	3	174,48,208,	0,47023,87569,
#Deleted in new
chr14	30791097	30791489	chr14:30791097-30791489	7	+	30791097	30791097	16724991	1	392,	0,
#Deleted in new
chr14	30819713	30819914	chr14:30819713-30819914	7	+	30819713	30819713	16724991	1	201,	0,
#Deleted in new
chr14	30821418	30821843	chr14:30821418-30821843	7	+	30821418	30821418	16724991	1	425,	0,
#Partially deleted in new
chr14	30874513	30890100	chr14:30874513-30890100	1	+	30874938	30889791	789624	11	459,243,157,134,63,45,148,104,227,517,485,	0,542,3058,4297,4909,5938,6073,10039,10880,11282,15102,
#Partially deleted in new
chr14	30874523	30890618	chr14:30874523-30890618	1	+	30874938	30889791	0	12	68,57,48,157,134,63,45,148,104,227,517,1003,	0,392,532,3048,4287,4899,5928,6063,10029,10870,11272,15092,
#Partially deleted in new
chr14	30874534	30890618	chr14:30874534-30890618	1	+	30874938	30889791	0	11	438,48,157,134,63,45,148,104,227,517,1003,	0,521,3037,4276,4888,5917,6052,10018,10859,11261,15081,
#Partially deleted in new
chr14	30874558	30884618	chr14:30874558-30884618	0	+	30874938	30880455	789624	7	33,57,48,157,45,148,66,	0,357,497,3013,5893,6028,9994,
#Partially deleted in new
chr14	30874558	30894928	chr14:30874558-30894928	1	+	30874938	30894920	789624	12	414,48,157,134,63,45,148,104,57,227,517,16,	0,497,3013,4252,4864,5893,6028,9994,10426,10835,11237,20354,
#Partially deleted in new
chr14	30874571	30895065	chr14:30874571-30895065	1	+	30874938	30894920	0	11	401,48,157,134,63,45,148,104,227,517,153,	0,484,3000,4239,4851,5880,6015,9981,10822,11224,20341,
#Partially deleted in new
chr14	30874744	30880734	chr14:30874744-30880734	0	+	30874938	30880734	789624	6	228,157,134,63,45,148,	0,2827,4066,4678,5707,5842,
#Partially deleted in new
chr14	30874762	30885620	chr14:30874762-30885620	0	+	30874938	30885620	789624	6	210,48,45,148,104,227,	0,293,5689,5824,9790,10631,
#Partially deleted in new
chr14	30874763	30890616	chr14:30874763-30890616	1	+	30878907	30889791	789624	10	292,157,134,63,45,148,104,227,517,1001,	0,2808,4047,4659,5688,5823,9789,10630,11032,14852,
#Partially deleted in new
chr14	30874891	30895029	chr14:30874891-30895029	3	+	30874938	30889791	0	12	81,48,157,134,63,45,148,104,227,517,178,117,	0,164,2680,3919,4531,5560,5695,9661,10502,10904,14724,20021,
#Partially deleted in new
chr14	30875589	30889887	chr14:30875589-30889887	0	+	30875589	30875589	8553170	11	327,157,134,63,45,148,104,57,227,517,272,	0,1982,3221,3833,4862,4997,8963,9395,9804,10206,14026,
#Partially deleted in new
chr14	30876178	30889808	chr14:30876178-30889808	3	-	30876178	30876178	789624	5	374,165,914,113,425,	0,8331,9234,12964,13205,
#Partially deleted in new
chr14	30877335	30880496	chr14:30877335-30880496	0	+	30877335	30877335	8553170	4	393,134,63,45,	0,1475,2087,3116,
#Partially deleted in new
chr14	30877573	30885532	chr14:30877573-30885532	0	+	30877573	30879435	789624	6	155,63,45,148,104,139,	0,1849,2878,3013,6979,7820,
#Partially deleted in new
chr14	30880586	30890616	chr14:30880586-30890616	0	+	30880586	30889791	789624	6	148,104,132,227,517,1001,	0,3966,4323,4807,5209,9029,
#Deleted in new
chr14	30884464	30885188	chr14:30884464-30885188	0	-	30884464	30884464	8553170	2	210,221,	0,503,
#Partially deleted in new
chr14	30886182	30889673	chr14:30886182-30889673	0	-	30886182	30886182	8553170	3	144,135,290,	0,2960,3201,
#Partially deleted in new
chr14	30886228	30889691	chr14:30886228-30889691	0	-	30886228	30886228	8553170	3	98,136,308,	0,2891,3155,
#Partially deleted in new
chr14	30893798	31026401	chr14:30893798-31026401	3	-	30895410	31026185	0	16	1782,87,108,141,168,122,48,176,134,142,130,174,82,74,104,498,	0,1863,8737,11619,13078,17242,17978,18208,19725,41364,42696,53291,57064,61821,62340,132105,
#Partially deleted in new
chr14	30895202	31026382	chr14:30895202-31026382	1	-	30895410	31026185	0	18	378,87,108,141,168,122,48,176,134,141,111,142,130,174,82,74,104,479,	0,459,7333,10215,11674,15838,16574,16804,18321,23763,33998,39960,41292,51887,55660,60417,60936,130701,
#Partially deleted in new
chr14	30895344	31026319	chr14:30895344-31026319	0	-	30912171	31026185	789624	15	236,87,108,141,168,122,48,176,142,130,174,82,74,104,416,	0,317,7191,10073,11532,15696,16432,16662,39818,41150,51745,55518,60275,60794,130559,
#Partially deleted in new
chr14	30905416	30912311	chr14:30905416-30912311	0	-	30905416	30905416	8553170	5	142,168,122,48,305,	0,1460,5624,6360,6590,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	30912065	30932398	chr14:30912065-30932398	0	-	30912065	30912065	8553170	2	117,458,	0,19875,
#Partially deleted in new
chr14	30913523	30935304	chr14:30913523-30935304	0	-	30913523	30935304	789624	3	134,141,142,	0,5442,21639,
#Partially deleted in new
chr14	30913523	30936621	chr14:30913523-30936621	0	-	30913523	30936621	789624	4	134,111,142,127,	0,15677,21639,22971,
#Partially deleted in new
chr14	30947111	30964509	chr14:30947111-30964509	0	-	30947111	30956167	789624	5	152,82,74,104,155,	0,3751,8508,9027,17243,
#Partially deleted in new
chr14	30964346	30964622	chr14:30964346-30964622	7	+	30964346	30964346	16724991	1	276,	0,
#Deleted in new
chr14	31014645	31014742	chr14:31014645-31014742	3	-	31014645	31014645	5263520	1	97,	0,
#Deleted in new
chr14	31018445	31018796	chr14:31018445-31018796	7	+	31018445	31018445	16724991	1	351,	0,
#Partially deleted in new
chr14	31025105	31092999	chr14:31025105-31092999	0	+	31066196	31092999	789624	6	193,209,87,69,12,93,	0,41020,44737,47799,55467,67801,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	31025105	31096449	chr14:31025105-31096449	3	+	31066196	31093035	789624	6	193,209,87,69,12,3543,	0,41020,44737,47799,55467,67801,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	31025465	31096450	chr14:31025465-31096450	1	+	31066196	31093035	789624	6	322,209,87,69,12,3544,	0,40660,44377,47439,55107,67441,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	31025469	31083609	chr14:31025469-31083609	1	+	31066196	31083609	789624	6	318,209,87,69,72,84,	0,40656,44373,47435,55103,58056,
#Partially deleted in new
chr14	31025646	31072973	chr14:31025646-31072973	0	+	31066196	31072973	789624	5	141,36,209,87,69,	0,7324,40479,44196,47258,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	31025650	31086450	chr14:31025650-31086450	1	+	31066196	31084882	789624	6	137,209,87,69,72,1682,	0,40475,44192,47254,54922,59118,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	31025667	31085211	chr14:31025667-31085211	1	+	31066196	31083609	789624	7	120,209,87,69,72,122,443,	0,40458,44175,47237,54905,57858,59101,
#Partially deleted in new
chr14	31025670	31093432	chr14:31025670-31093432	1	+	31066196	31092917	789624	5	117,209,87,73,526,	0,40455,44172,47234,67236,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	31025682	31085789	chr14:31025682-31085789	1	+	31066196	31084882	789624	5	105,209,87,69,1021,	0,40443,44160,47222,59086,
#Partially deleted in new
chr14	31026642	31066219	chr14:31026642-31066219	0	+	31066196	31066219	789624	2	675,94,	0,39483,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	31026642	31096449	chr14:31026642-31096449	1	+	31066196	31093035	789624	6	675,209,87,69,12,3543,	0,39483,43200,46262,53930,66264,
#Partially deleted in new
chr14	31066295	31073185	chr14:31066295-31073185	0	+	31066295	31073030	789624	3	39,87,281,	0,3547,6609,
#Partially deleted in new
chr14	31100111	31127868	chr14:31100111-31127868	0	-	31100929	31127868	789624	18	956,145,151,94,79,608,138,202,128,86,208,183,55,223,157,123,128,84,	0,1068,2804,5271,5478,6534,7455,9285,12304,12992,13165,13765,14174,16124,19598,21271,22808,27673,
#Partially deleted in new
chr14	31100117	31207483	chr14:31100117-31207483	1	-	31100929	31205936	789624	43	950,145,151,94,79,608,138,202,128,86,208,183,55,223,157,123,134,222,837,177,167,324,140,135,106,95,147,135,77,264,223,171,139,175,115,99,77,271,282,228,235,161,468,	0,1062,2798,5265,5472,6528,7449,9279,12298,12986,13159,13759,14168,16118,19592,21265,22796,27667,28494,33120,33391,34754,35358,36413,39774,41740,43993,44689,48603,48779,49881,56722,57047,68180,69236,71743,71928,73038,73407,74793,77902,105679,106898,
#Partially deleted in new
chr14	31100117	31207804	chr14:31100117-31207804	3	-	31100929	31205936	789624	43	950,145,151,94,79,608,138,202,128,86,208,183,55,223,157,123,134,222,837,177,167,324,140,135,106,95,147,135,77,264,223,171,139,175,115,99,77,271,282,228,235,161,414,	0,1062,2798,5265,5472,6528,7449,9279,12298,12986,13159,13759,14168,16118,19592,21265,22796,27667,28494,33120,33391,34754,35358,36413,39774,41740,43993,44689,48603,48779,49881,56722,57047,68180,69236,71743,71928,73038,73407,74793,77902,105679,107273,
#Partially deleted in new
chr14	31100117	31123670	chr14:31100117-31123670	0	-	31100117	31100117	8553170	17	950,145,151,94,79,608,138,202,128,86,208,183,55,223,157,123,751,	0,1062,2798,5265,5472,6528,7449,9279,12298,12986,13159,13759,14168,16118,19592,21265,22802,
#Partially deleted in new
chr14	31100117	31207317	chr14:31100117-31207317	1	-	31100929	31205936	789624	45	950,145,151,94,79,608,138,202,128,86,208,183,55,223,157,123,134,222,837,177,167,324,140,135,106,44,15,24,171,135,77,264,223,171,139,175,115,99,77,271,282,228,235,161,302,	0,1062,2798,5265,5472,6528,7449,9279,12298,12986,13159,13759,14168,16118,19592,21265,22796,27667,28494,33120,33391,34754,35358,36413,39774,41740,41788,43944,43969,44689,48603,48779,49881,56722,57047,68180,69236,71743,71928,73038,73407,74793,77902,105679,106898,
#Deleted in new
chr14	31100596	31101392	chr14:31100596-31101392	0	-	31100596	31100596	8553170	2	471,213,	0,583,
#Partially deleted in new
chr14	31102787	31105627	chr14:31102787-31105627	0	-	31102787	31102787	8553170	2	279,245,	0,2595,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	31109123	31112443	chr14:31109123-31112443	0	-	31109123	31109123	8553170	2	475,28,	0,3292,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	31111568	31112239	chr14:31111568-31112239	7	-	31111568	31111568	16724991	2	239,233,	0,438,
#Partially deleted in new
chr14	31113139	31168341	chr14:31113139-31168341	0	-	31113139	31168341	789624	25	50,208,183,55,223,157,123,134,222,696,177,167,324,140,135,106,95,147,135,77,264,223,171,139,44,	0,137,737,1146,3096,6570,8243,9774,14645,15472,20098,20369,21732,22336,23391,26752,28718,30971,31667,35581,35757,36859,43700,44025,55158,
#Deleted in new
chr14	31113430	31114393	chr14:31113430-31114393	0	-	31113430	31113430	8553170	2	54,517,	0,446,
#Partially deleted in new
chr14	31116320	31121643	chr14:31116320-31121643	0	-	31116320	31116320	8553170	3	138,157,261,	0,3389,5062,
#Partially deleted in new
chr14	31119769	31128701	chr14:31119769-31128701	0	-	31123568	31128701	789624	6	97,123,134,109,222,90,	0,1613,3144,3746,8015,8842,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	31127518	31128718	chr14:31127518-31128718	0	-	31127518	31127518	8553170	2	488,107,	0,1093,
#Partially deleted in new
chr14	31127865	31134940	chr14:31127865-31134940	0	-	31127865	31134940	789624	4	141,177,167,69,	0,5372,5643,7006,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	31135541	31136838	chr14:31135541-31136838	0	-	31135541	31135541	8553170	2	74,308,	0,989,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	31142938	31143048	chr14:31142938-31143048	3	+	31142938	31142938	8553170	1	110,	0,
#Partially deleted in new
chr14	31144110	31207483	chr14:31144110-31207483	0	-	31144110	31205936	789624	17	147,135,77,264,223,171,139,175,115,99,77,271,282,228,235,161,468,	0,696,4610,4786,5888,12729,13054,24187,25243,27750,27935,29045,29414,30800,33909,61686,62905,
#Partially deleted in new
chr14	31172953	31174974	chr14:31172953-31174974	0	-	31173135	31174974	789624	3	473,282,64,	0,571,1957,
#Partially deleted in new
chr14	31178064	31206176	chr14:31178064-31206176	0	-	31178064	31178064	8553170	2	190,380,	0,27732,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	31203070	31207709	chr14:31203070-31207709	0	-	31203070	31203070	8553170	3	566,161,319,	0,2726,4320,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	31244760	31244861	chr14:31244760-31244861	3	+	31244760	31244760	8553170	1	101,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	31258607	31258709	chr14:31258607-31258709	3	-	31258607	31258607	8553170	1	102,	0,
#Boundary problem: need 36, got 0, diff 36, mapped 0.0
chr14	31291790	31420582	chr14:31291790-31420582	3	-	31293304	31402975	789624	36	1822,214,155,225,273,148,128,249,223,180,69,182,240,180,139,170,190,160,191,106,176,164,110,100,153,112,251,156,256,161,175,150,109,212,200,111,	0,2100,4118,10504,13114,14941,16102,17143,21177,23979,26433,29708,31774,34372,45685,52105,53296,55957,57998,58821,66846,67103,72398,80019,83025,88676,91730,94629,95329,97054,102261,103408,106882,108510,111059,128681,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	31292601	31297720	chr14:31292601-31297720	0	-	31292601	31292601	8553170	3	1011,214,1812,	0,1289,3307,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr14	31292866	31387191	chr14:31292866-31387191	0	-	31293304	31387191	789624	28	746,214,155,273,148,128,249,223,180,69,182,240,180,139,170,190,160,191,106,176,164,110,100,153,112,251,156,72,	0,1024,3042,12038,13865,15026,16067,20101,22903,25357,28632,30698,33296,44609,51029,52220,54881,56922,57745,65770,66027,71322,78943,81949,87600,90654,93553,94253,
#Partially deleted in new
chr14	31320223	31320634	chr14:31320223-31320634	7	-	31320223	31320223	16724991	1	411,	0,
#Partially deleted in new
chr14	31323591	31387283	chr14:31323591-31387283	0	-	31323591	31387283	789624	17	213,180,139,170,190,160,191,106,176,164,110,100,153,112,251,108,164,	0,2571,13884,20304,21495,24156,26197,27020,35045,35302,40597,48218,51224,56875,59929,62828,63528,
#Partially deleted in new
chr14	31325875	31337594	chr14:31325875-31337594	0	-	31326088	31337594	789624	2	467,119,	0,11600,
#Partially deleted in new
chr14	31326194	31345200	chr14:31326194-31345200	0	-	31326194	31345200	789624	5	148,139,27,170,114,	0,11281,14255,17701,18892,
#Partially deleted in new
chr14	31371556	31374951	chr14:31371556-31374951	0	-	31371556	31371556	8553170	2	353,136,	0,3259,
#Partially deleted in new
chr14	31400265	31420531	chr14:31400265-31420531	1	-	31400296	31402975	789624	3	247,200,60,	0,2584,20206,
#Partially deleted in new
chr14	31400278	31457407	chr14:31400278-31457407	3	-	31428165	31457393	789624	4	234,45,70,125,	0,27865,52996,57004,
#Partially deleted in new
chr14	31400376	31420295	chr14:31400376-31420295	0	-	31400376	31402975	789624	3	136,200,144,	0,2473,19775,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	31420285	31439949	chr14:31420285-31439949	1	+	31420285	31420285	8553170	3	300,121,278,	0,1562,19386,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	31420757	31452883	chr14:31420757-31452883	3	+	31420757	31420757	789624	4	220,125,91,777,	0,1086,24886,31349,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	31420943	31439945	chr14:31420943-31439945	0	+	31420943	31420943	8553170	3	34,121,274,	0,904,18728,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	31427506	31457376	chr14:31427506-31457376	0	-	31457186	31457376	789624	4	286,45,70,348,	0,637,25768,29522,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	31446035	31457510	chr14:31446035-31457510	3	-	31448128	31457393	789624	3	2419,70,228,	0,7239,11247,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	31446991	31457425	chr14:31446991-31457425	1	-	31448128	31457393	789624	5	257,180,750,70,143,	0,398,713,6283,10291,
#Partially deleted in new
chr14	31448161	31457488	chr14:31448161-31457488	0	-	31457186	31457393	789624	3	293,70,460,	0,5113,8867,
#Partially deleted in new
chr14	31462794	31463371	chr14:31462794-31463371	7	-	31462794	31462794	16724991	1	577,	0,
#Partially deleted in new
chr14	31482874	31488142	chr14:31482874-31488142	3	-	31482963	31483965	789624	2	1097,246,	0,5022,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	31489955	31562197	chr14:31489955-31562197	0	+	31550894	31562197	789624	4	148,125,157,130,	0,36096,60815,72112,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	31553357	31558498	chr14:31553357-31558498	3	-	31553357	31553357	8553170	3	273,76,81,	0,630,5060,
#Partially deleted in new
chr14	31558506	31561334	chr14:31558506-31561334	3	-	31558506	31558506	8553170	2	64,224,	0,2604,
#Partially deleted in new
chr14	31561384	31859124	chr14:31561384-31859124	0	+	31561439	31859124	789624	6	163,148,35,121,83,7,	0,683,3629,285086,288734,297733,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	31561394	31861224	chr14:31561394-31861224	3	+	31561439	31859180	789624	11	153,148,35,91,40,91,94,86,121,83,2107,	0,673,3619,37894,111960,112089,226385,265234,285076,288724,297723,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	31561397	31860273	chr14:31561397-31860273	0	+	31561439	31826637	789624	10	150,148,35,91,40,91,86,121,83,1156,	0,670,3616,37891,111957,112086,265231,285073,288721,297720,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	31561475	31787793	chr14:31561475-31787793	0	+	31561475	31654116	789624	8	72,148,35,91,65,40,91,14,	0,592,3538,37813,92594,111879,112008,226304,
#Partially deleted in new
chr14	31561623	31787822	chr14:31561623-31787822	0	+	31562115	31787822	789624	7	119,148,35,91,40,91,43,	0,444,3390,37665,111731,111860,226156,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	31662038	31662143	chr14:31662038-31662143	3	-	31662038	31662038	8553170	1	105,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	31686691	31686798	chr14:31686691-31686798	3	-	31686691	31686691	8553170	1	107,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	31714568	31860302	chr14:31714568-31860302	0	+	31714568	31714568	8553170	6	235,94,86,121,83,1185,	0,73211,112060,131902,135550,144549,
#Partially deleted in new
chr14	31800856	31850095	chr14:31800856-31850095	0	+	31800856	31800856	8553170	4	321,86,121,49,	0,25772,45614,49190,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	31843743	31861218	chr14:31843743-31861218	0	+	31843743	31843743	8553170	3	2848,83,2101,	0,6375,15374,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	31925800	31930146	chr14:31925800-31930146	3	-	31925800	31925800	8553170	2	469,767,	0,3579,
#Partially deleted in new
chr14	31944852	31950382	chr14:31944852-31950382	3	+	31944852	31944852	8553170	2	256,294,	0,5236,
#Deleted in new
chr14	31964549	31965095	chr14:31964549-31965095	7	+	31964549	31964549	16724991	1	546,	0,
#Deleted in new
chr14	31964559	31964714	chr14:31964559-31964714	5	+	31964559	31964559	16724991	1	155,	0,
#Partially deleted in new
chr14	32006901	32018685	chr14:32006901-32018685	3	+	32006901	32006901	8553170	2	98,178,	0,11606,
#Deleted in new
chr14	32074945	32076793	chr14:32074945-32076793	3	-	32074945	32074945	789624	1	1848,	0,
#Partially deleted in new
chr14	32076113	32090780	chr14:32076113-32090780	0	+	32090669	32090780	789624	3	104,200,279,	0,344,14388,
#Partially deleted in new
chr14	32076966	32155011	chr14:32076966-32155011	1	+	32090669	32154948	0	7	87,3885,145,78,132,106,391,	0,13535,40176,69296,72935,75456,77654,
#Partially deleted in new
chr14	32076984	32155083	chr14:32076984-32155083	1	+	32090669	32154948	0	7	69,3885,148,78,132,106,463,	0,13517,40155,69278,72917,75438,77636,
#Partially deleted in new
chr14	32077073	32159728	chr14:32077073-32159728	1	+	32077365	32154948	0	5	362,78,132,106,5108,	0,69189,72828,75349,77547,
#Partially deleted in new
chr14	32077288	32159728	chr14:32077288-32159728	3	+	32090669	32154948	0	7	147,3885,148,78,132,106,5108,	0,13213,39851,68974,72613,75134,77332,
#Partially deleted in new
chr14	32077288	32155138	chr14:32077288-32155138	1	+	32090669	32154948	789624	11	148,3588,138,153,145,78,132,106,82,9,424,	0,13213,16802,16942,39854,68974,72613,75134,77332,77415,77426,
#Partially deleted in new
chr14	32077308	32157079	chr14:32077308-32157079	1	+	32117205	32154948	0	6	127,145,78,132,106,2459,	0,39834,68954,72593,75114,77312,
#Partially deleted in new
chr14	32078230	32154633	chr14:32078230-32154633	0	+	32117205	32154633	789624	6	66,148,78,132,106,13,	0,38909,68032,71671,74192,76390,
#Partially deleted in new
chr14	32078230	32091089	chr14:32078230-32091089	0	+	32090669	32091089	789624	2	66,588,	0,12271,
#Partially deleted in new
chr14	32094037	32154827	chr14:32094037-32154827	0	+	32094037	32149919	789624	5	349,78,132,106,207,	0,52225,55864,58385,60583,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	32149175	32158008	chr14:32149175-32158008	3	-	32149175	32149175	8553170	2	327,3611,	0,5222,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	32154009	32157216	chr14:32154009-32157216	0	+	32154009	32154009	8553170	1	3207,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	32202044	32202151	chr14:32202044-32202151	3	+	32202044	32202044	789624	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	32203162	32203269	chr14:32203162-32203269	3	-	32203162	32203162	789624	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	32241523	32243093	chr14:32241523-32243093	7	-	32241523	32241523	16724991	1	1570,	0,
#Deleted in new
chr14	32271856	32272301	chr14:32271856-32272301	7	-	32271856	32271856	16724991	1	445,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	32329272	32837681	chr14:32329272-32837681	3	+	32433493	32824773	789624	14	136,358,252,1770,123,97,164,149,121,147,225,216,3414,7834,	0,104187,206281,215957,247847,270137,271356,349038,366717,403181,406385,444405,492129,500575,
#Partially deleted in new
chr14	32329343	32734613	chr14:32329343-32734613	1	+	32433493	32732681	789624	10	65,358,252,1770,123,97,164,149,121,2160,	0,104116,206210,215886,247776,270066,271285,348967,366646,403110,
#Partially deleted in new
chr14	32329348	32433817	chr14:32329348-32433817	0	+	32433493	32433817	789624	3	60,144,358,	0,72649,104111,
#Partially deleted in new
chr14	32329349	32433982	chr14:32329349-32433982	0	+	32329349	32329349	8553170	2	59,523,	0,104110,
#Partially deleted in new
chr14	32329399	32830817	chr14:32329399-32830817	1	+	32433493	32829997	789624	13	9,358,252,1770,123,97,164,149,121,147,225,216,970,	0,104060,206154,215830,247720,270010,271229,348911,366590,403054,406258,444278,500448,
#Partially deleted in new
chr14	32403043	32417974	chr14:32403043-32417974	1	-	32403043	32403043	8553170	2	351,167,	0,14764,
#Partially deleted in new
chr14	32433163	32439032	chr14:32433163-32439032	0	+	32433163	32433163	8553170	2	654,359,	0,5510,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	32442340	32442639	chr14:32442340-32442639	3	+	32442340	32442340	8553170	1	299,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	32473756	32546449	chr14:32473756-32546449	0	+	32545379	32546449	789624	3	802,252,1220,	0,61797,71473,
#Partially deleted in new
chr14	32484097	32484800	chr14:32484097-32484800	7	-	32484097	32484097	16724991	1	703,	0,
#Partially deleted in new
chr14	32494270	32545455	chr14:32494270-32545455	0	+	32545379	32545455	789624	3	104,252,226,	0,41283,50959,
#Partially deleted in new
chr14	32495071	32545520	chr14:32495071-32545520	0	+	32545379	32545520	789624	3	333,252,291,	0,40482,50158,
#Partially deleted in new
chr14	32616966	32773791	chr14:32616966-32773791	0	+	32616966	32616966	8553170	7	40,62,149,121,147,225,114,	0,11070,61344,79023,115487,118691,156711,
#Partially deleted in new
chr14	32616977	32732765	chr14:32616977-32732765	0	+	32616977	32616977	8553170	4	29,149,121,312,	0,61333,79012,115476,
#Partially deleted in new
chr14	32693400	32732584	chr14:32693400-32732584	0	+	32693400	32693400	8553170	4	108,90,121,131,	0,226,2589,39053,
#Partially deleted in new
chr14	32693461	32735725	chr14:32693461-32735725	0	+	32693461	32693461	8553170	4	255,121,147,68,	0,2528,38992,42196,
#Partially deleted in new
chr14	32733261	32773829	chr14:32733261-32773829	0	+	32733261	32733261	8553170	3	124,225,152,	0,2396,40416,
#Partially deleted in new
chr14	32735850	32774001	chr14:32735850-32774001	0	+	32735850	32774001	789624	2	32,324,	0,37827,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	32879245	32882830	chr14:32879245-32882830	3	+	32879245	32879245	8553170	1	3585,	0,
#Partially deleted in new
chr14	32934932	33801109	chr14:32934932-33801109	1	+	32934932	33801109	789624	12	71,90,245,77,90,175,119,194,107,148,125,1376,	0,120972,280249,432259,625188,741278,800281,839404,843533,858964,862524,864801,
#Partially deleted in new
chr14	32934932	33801103	chr14:32934932-33801103	0	+	32934932	33801103	789624	11	71,245,83,90,175,119,194,107,148,116,1370,	0,280249,432253,625188,741278,800281,839404,843533,858964,862524,864801,
#Partially deleted in new
chr14	32939242	33804176	chr14:32939242-33804176	3	+	32939316	33801109	789624	11	124,245,77,90,175,119,194,107,148,125,4443,	0,275939,427949,620878,736968,795971,835094,839223,854654,858214,860491,
#Partially deleted in new
chr14	32939271	33801278	chr14:32939271-33801278	1	+	32939316	33801109	789624	11	95,245,83,90,175,119,194,107,148,125,1545,	0,275910,427914,620849,736939,795942,835065,839194,854625,858185,860462,
#Partially deleted in new
chr14	32939316	33801109	chr14:32939316-33801109	1	+	32939316	33801109	789624	12	50,90,245,83,90,175,119,194,107,148,125,1376,	0,116588,275865,427869,620804,736894,795897,835020,839149,854580,858140,860417,
#Partially deleted in new
chr14	32939316	33801109	chr14:32939316-33801109	1	+	32939316	33801109	789624	12	50,245,51,83,90,175,119,194,107,148,125,1376,	0,275865,276220,427869,620804,736894,795897,835020,839149,854580,858140,860417,
#Partially deleted in new
chr14	33213677	33681042	chr14:33213677-33681042	1	+	33215347	33680643	789624	5	1749,77,90,175,440,	0,153514,346443,462533,466925,
#Partially deleted in new
chr14	33215181	33560414	chr14:33215181-33560414	0	+	33215181	33215181	8553170	3	245,83,294,	0,152004,344939,
#Partially deleted in new
chr14	33215212	33681042	chr14:33215212-33681042	1	+	33215347	33680643	789624	5	214,83,90,175,440,	0,151973,344908,460998,465390,
#Partially deleted in new
chr14	33215311	33612580	chr14:33215311-33612580	0	+	33215311	33612494	789624	4	115,83,90,176,	0,151874,344809,397093,
#Deleted in new
chr14	33608486	33612589	chr14:33608486-33612589	0	+	33608486	33608486	8553170	3	157,131,185,	0,2497,3918,
#Partially deleted in new
chr14	33735240	33780871	chr14:33735240-33780871	0	+	33735240	33780635	789624	4	92,194,107,241,	0,39096,43225,45390,
#Partially deleted in new
chr14	33924230	33951081	chr14:33924230-33951081	3	-	33925890	33950752	789624	5	1692,74,137,120,686,	0,2729,4845,6865,26165,
#Partially deleted in new
chr14	33925398	33950826	chr14:33925398-33950826	1	-	33925890	33950752	789624	5	524,74,137,120,149,	0,1561,3677,5697,25279,
#Partially deleted in new
chr14	33925510	33931336	chr14:33925510-33931336	0	-	33925510	33925510	8553170	4	412,74,137,241,	0,1449,3565,5585,
#Partially deleted in new
chr14	33929098	34222877	chr14:33929098-34222877	0	-	33929098	34092323	789624	6	114,120,82,156,334,42,	0,1997,163222,240392,270388,293737,
#Deleted in new
chr14	33948232	33951081	chr14:33948232-33951081	1	-	33950305	33950752	789624	1	2849,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	33985152	34018655	chr14:33985152-34018655	0	-	33985152	33985152	8553170	3	360,151,55,	0,1859,33448,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	33985380	34462774	chr14:33985380-34462774	0	-	33985380	33985380	8553170	5	127,151,82,156,59,	0,1631,106940,184110,477335,
#Partially deleted in new
chr14	34040096	34059300	chr14:34040096-34059300	3	+	34040096	34040096	8553170	3	74,65,169,	0,1108,19035,
#Partially deleted in new
chr14	34092316	34222953	chr14:34092316-34222953	0	-	34092316	34092316	8553170	5	86,59,116,156,118,	0,33936,34712,77174,130519,
#Partially deleted in new
chr14	34096162	34227814	chr14:34096162-34227814	0	-	34096162	34096162	8553170	4	253,116,156,56,	0,30866,73328,131596,
#Partially deleted in new
chr14	34126252	34169766	chr14:34126252-34169766	0	-	34126252	34126252	8553170	4	59,116,156,21,	0,776,43238,43493,
#Partially deleted in new
chr14	34127028	34130044	chr14:34127028-34130044	0	-	34127028	34127028	8553170	2	116,542,	0,2474,
#Deleted in new
chr14	34416686	34417602	chr14:34416686-34417602	7	-	34416686	34416686	16724991	1	916,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	34432788	34462356	chr14:34432788-34462356	3	-	34435200	34462207	789624	2	2516,261,	0,29307,
#Deleted in new
chr14	34485978	34486447	chr14:34485978-34486447	7	+	34485978	34485978	16724991	1	469,	0,
#Partially deleted in new
chr14	34515928	34539710	chr14:34515928-34539710	3	-	34516309	34539628	789624	6	658,111,118,96,182,156,	0,8768,13429,17515,20165,23626,
#Partially deleted in new
chr14	34516011	34539711	chr14:34516011-34539711	1	-	34516469	34539628	789624	10	476,97,5,24,15,67,118,96,182,157,	0,478,8673,8683,8709,8729,13346,17432,20082,23543,
#Partially deleted in new
chr14	34516489	34536445	chr14:34516489-34536445	0	-	34516489	34536286	789624	5	97,111,118,96,352,	0,8207,12868,16954,19604,
#Partially deleted in new
chr14	34529355	34539698	chr14:34529355-34539698	0	-	34539298	34539628	789624	4	120,96,182,443,	0,4088,6738,9900,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	34535863	34539704	chr14:34535863-34539704	0	-	34535863	34535863	8553170	2	412,150,	0,3691,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	34541043	34541714	chr14:34541043-34541714	3	+	34541043	34541043	8553170	1	671,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	34541739	34546329	chr14:34541739-34546329	3	-	34541739	34541739	8553170	3	250,318,384,	0,1209,4206,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	34541816	34542444	chr14:34541816-34542444	1	-	34541816	34541816	8553170	2	182,363,	0,265,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	34556773	34561260	chr14:34556773-34561260	3	+	34556773	34556773	8553170	3	384,318,135,	0,3075,4352,
#Partially deleted in new
chr14	34560780	34561298	chr14:34560780-34561298	1	+	34560780	34560780	8553170	2	253,182,	0,336,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr14	34561093	34630109	chr14:34561093-34630109	1	-	34563121	34605639	789624	13	2082,86,160,87,40,76,106,96,124,122,111,105,203,	0,6592,6760,14662,20467,25136,31951,36456,42254,44502,46936,48544,68813,
#Partially deleted in new
chr14	34562408	34630183	chr14:34562408-34630183	3	-	34563121	34630152	789624	14	767,86,160,87,40,76,106,96,124,122,111,105,48,73,	0,5277,5445,13347,19152,23821,30636,35141,40939,43187,45621,47229,67498,67702,
#Partially deleted in new
chr14	34562659	34630158	chr14:34562659-34630158	0	-	34609729	34630152	789624	15	516,86,160,87,40,76,106,96,124,134,122,111,105,44,48,	0,5026,5194,13096,18901,23570,30385,34890,40688,41475,42936,45370,46978,67247,67451,
#Partially deleted in new
chr14	34567891	34630154	chr14:34567891-34630154	0	-	34604186	34630152	789624	13	122,87,40,76,106,96,124,134,122,111,105,48,44,	0,7864,13669,18338,25153,29658,35456,36243,37704,40138,41746,62015,62219,
#Deleted in new
chr14	34568688	34569129	chr14:34568688-34569129	7	-	34568688	34568688	16724991	1	441,	0,
#Partially deleted in new
chr14	34575590	34586316	chr14:34575590-34586316	0	-	34575590	34575590	8553170	2	252,87,	0,10639,
#Partially deleted in new
chr14	34586229	34630133	chr14:34586229-34630133	0	-	34603468	34630133	789624	10	76,106,96,124,40,122,111,105,48,23,	0,6815,11320,17118,17905,19366,21800,23408,43677,43881,
#Partially deleted in new
chr14	34586229	34630158	chr14:34586229-34630158	0	-	34586229	34630152	789624	8	76,106,96,124,122,105,48,48,	0,6815,11320,17118,19366,23408,43677,43881,
#Partially deleted in new
chr14	34603364	34630153	chr14:34603364-34630153	0	-	34604186	34630152	789624	6	107,134,122,105,48,43,	0,770,2231,6273,26542,26746,
#Partially deleted in new
chr14	34605486	34630154	chr14:34605486-34630154	0	-	34605486	34605486	8553170	5	231,111,105,48,44,	0,2543,4151,24420,24624,
#Partially deleted in new
chr14	34605681	34629672	chr14:34605681-34629672	0	-	34605681	34629601	789624	4	36,111,105,215,	0,2348,3956,23776,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	34659563	34659878	chr14:34659563-34659878	3	-	34659563	34659563	8553170	1	315,	0,
#Deleted in new
chr14	34675890	34675994	chr14:34675890-34675994	3	+	34675890	34675890	8553170	1	104,	0,
#Deleted in new
chr14	34694169	34694644	chr14:34694169-34694644	7	+	34694169	34694169	16724991	1	475,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	34706768	34714690	chr14:34706768-34714690	3	-	34712864	34714540	789624	4	6209,77,308,153,	0,6291,6485,7769,
#Deleted in new
chr14	34710386	34713828	chr14:34710386-34713828	1	-	34712864	34713676	789624	4	2591,77,308,155,	0,2673,2867,3287,
#Deleted in new
chr14	34712007	34714823	chr14:34712007-34714823	0	-	34713127	34714540	789624	4	970,77,54,286,	0,1052,1500,2530,
#Deleted in new
chr14	34712036	34714577	chr14:34712036-34714577	0	-	34713127	34714540	789624	4	941,77,165,40,	0,1023,1360,2501,
#Deleted in new
chr14	34712851	34714555	chr14:34712851-34714555	1	-	34712864	34713513	789624	4	126,77,308,121,	0,208,402,1583,
#Deleted in new
chr14	34712857	34714236	chr14:34712857-34714236	1	-	34712864	34713513	789624	4	120,77,308,41,	0,202,396,1338,
#Partially deleted in new
chr14	34740335	34740833	chr14:34740335-34740833	7	-	34740335	34740335	16724991	1	498,	0,
#Partially deleted in new
chr14	34752730	34875647	chr14:34752730-34875647	1	-	34753507	34874604	0	26	974,88,143,467,227,248,149,155,164,597,125,114,166,225,147,139,96,167,100,135,88,102,144,279,171,510,	0,2096,5973,9026,11976,12290,18780,20841,21596,23188,27455,30388,31031,33046,40044,42018,42939,47493,48363,50123,54720,58204,73282,109313,121761,122407,
#Partially deleted in new
chr14	34752731	34874932	chr14:34752731-34874932	1	-	34753507	34874604	0	26	973,88,143,467,227,248,149,155,164,597,125,114,166,225,96,147,139,96,167,100,135,88,102,144,279,441,	0,2095,5972,9025,11975,12289,18779,20840,21595,23187,27454,30387,31030,33045,33394,40043,42017,42938,47492,48362,50122,54719,58203,73281,109312,121760,
#Partially deleted in new
chr14	34752736	34875647	chr14:34752736-34875647	3	-	34753507	34874604	0	27	968,88,143,467,227,248,149,155,164,597,125,114,166,225,96,147,139,96,167,100,135,88,102,144,279,171,510,	0,2090,5967,9020,11970,12284,18774,20835,21590,23182,27449,30382,31025,33040,33389,40038,42012,42933,47487,48357,50117,54714,58198,73276,109307,121755,122401,
#Partially deleted in new
chr14	34753233	34761776	chr14:34753233-34761776	0	-	34754897	34761776	789624	3	471,88,20,	0,1593,8523,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	34758565	34761936	chr14:34758565-34761936	0	-	34758565	34758565	8553170	2	281,180,	0,3191,
#Partially deleted in new
chr14	34764881	34771659	chr14:34764881-34771659	0	-	34768700	34771659	789624	4	52,248,91,149,	0,139,3808,6629,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	34771174	34773726	chr14:34771174-34773726	0	-	34771174	34771174	8553170	2	485,155,	0,2397,
#Partially deleted in new
chr14	34780115	34785974	chr14:34780115-34785974	0	-	34780132	34785974	789624	4	195,114,166,198,	0,3003,3646,5661,
#Partially deleted in new
chr14	34780176	34786091	chr14:34780176-34786091	0	-	34780176	34780176	8553170	4	134,114,166,315,	0,2942,3585,5600,
#Partially deleted in new
chr14	34783895	34786601	chr14:34783895-34786601	0	-	34783895	34783895	8553170	3	32,225,476,	0,1881,2230,
#Partially deleted in new
chr14	34810941	34862107	chr14:34810941-34862107	0	-	34816831	34862107	789624	4	95,142,144,64,	0,5773,15071,51102,
#Partially deleted in new
chr14	34828558	34862311	chr14:34828558-34862311	0	-	34828558	34828558	8553170	2	165,268,	0,33485,
#Deleted in new
chr14	34874342	34876459	chr14:34874342-34876459	3	+	34874342	34874342	8553170	1	2117,	0,
#Partially deleted in new
chr14	34920857	34982452	chr14:34920857-34982452	7	-	34920857	34920857	16724991	6	79,125,142,96,138,23,	0,731,5528,34001,48312,61572,
#Partially deleted in new
chr14	34920864	34921006	chr14:34920864-34921006	7	+	34920864	34920864	16724991	1	142,	0,
#Deleted in new
chr14	34939323	34940332	chr14:34939323-34940332	7	+	34939323	34939323	16724991	1	1009,	0,
#Partially deleted in new
chr14	34954858	34982526	chr14:34954858-34982526	5	-	34954858	34954858	16724991	5	96,112,122,138,97,	0,9070,10702,14311,27571,
#Partially deleted in new
chr14	34963707	34982532	chr14:34963707-34982532	5	-	34963707	34963707	16724991	3	333,138,109,	0,5462,18716,
#Partially deleted in new
chr14	34963913	34982492	chr14:34963913-34982492	4	-	34963913	34963913	16724991	4	127,138,272,63,	0,5256,8028,18516,
#Partially deleted in new
chr14	34981956	35029567	chr14:34981956-35029567	3	+	34996709	35029152	0	17	46,318,111,92,85,105,67,58,151,149,101,87,74,109,171,96,507,	0,941,14720,17601,18979,25326,26670,26817,29552,31389,31845,32787,36735,37009,40953,46131,47104,
#Partially deleted in new
chr14	34982681	34999610	chr14:34982681-34999610	0	+	34996709	34999610	789624	4	322,86,111,53,	0,448,13995,16876,
#Partially deleted in new
chr14	34982700	35000987	chr14:34982700-35000987	0	+	34996709	35000987	789624	4	303,111,92,52,	0,13976,16857,18235,
#Partially deleted in new
chr14	34982897	35029565	chr14:34982897-35029565	1	+	34996709	35029152	0	16	318,111,92,85,105,67,58,151,149,101,87,74,109,171,96,505,	0,13779,16660,18038,24385,25729,25876,28611,30448,30904,31846,35794,36068,40012,45190,46163,
#Partially deleted in new
chr14	34982897	35029565	chr14:34982897-35029565	1	+	34996764	35029152	0	15	318,111,85,105,67,58,151,149,101,87,74,109,171,96,505,	0,13779,18038,24385,25729,25876,28611,30448,30904,31846,35794,36068,40012,45190,46163,
#Partially deleted in new
chr14	34982972	34996924	chr14:34982972-34996924	0	+	34982972	34982972	8553170	2	243,248,	0,13704,
#Partially deleted in new
chr14	34982991	34999866	chr14:34982991-34999866	0	+	34982991	34982991	8553170	3	224,111,309,	0,13685,16566,
#Partially deleted in new
chr14	34983024	35029454	chr14:34983024-35029454	1	+	35000957	35029152	789624	15	191,111,85,105,67,58,151,149,101,87,74,109,171,96,394,	0,13652,17911,24258,25602,25749,28484,30321,30777,31719,35667,35941,39885,45063,46036,
#Partially deleted in new
chr14	34983104	35013434	chr14:34983104-35013434	0	+	34996709	35008783	789624	7	111,111,38,42,58,151,89,	0,13572,16453,25547,25669,28404,30241,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	34993243	35004608	chr14:34993243-35004608	0	+	34993243	34993243	8553170	5	199,111,92,85,65,	0,3433,6314,7692,11300,
#Partially deleted in new
chr14	34996709	35008697	chr14:34996709-35008697	1	+	34996709	35008697	789624	3	78,38,46,	0,2848,11942,
#Partially deleted in new
chr14	35014757	35019391	chr14:35014757-35019391	0	+	35014757	35014757	8553170	3	73,74,426,	0,3934,4208,
#Deleted in new
chr14	35018628	35019358	chr14:35018628-35019358	0	+	35018628	35018628	8553170	2	137,393,	0,337,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	35027729	35029135	chr14:35027729-35029135	0	+	35027729	35027729	8553170	2	454,75,	0,1331,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	35044906	35083381	chr14:35044906-35083381	1	+	35046532	35081228	789624	7	288,143,124,174,67,98,2360,	0,1081,1598,8371,32243,34020,36115,
#Partially deleted in new
chr14	35045116	35053408	chr14:35045116-35053408	0	+	35046532	35053408	789624	4	78,143,124,131,	0,871,1388,8161,
#Partially deleted in new
chr14	35046377	35081387	chr14:35046377-35081387	1	+	35046532	35081228	789624	6	29,124,174,67,98,366,	0,127,6900,30772,32549,34644,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	35046402	35083383	chr14:35046402-35083383	3	+	35046463	35081228	789624	5	226,174,67,98,2362,	0,6875,30747,32524,34619,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	35046452	35050396	chr14:35046452-35050396	1	+	35046463	35050137	789624	2	176,364,	0,3580,
#Partially deleted in new
chr14	35046592	35053431	chr14:35046592-35053431	0	+	35046592	35046703	789624	2	362,154,	0,6685,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	35046603	35054991	chr14:35046603-35054991	0	+	35046603	35053285	789624	4	25,85,174,333,	0,4180,6674,8055,
#Partially deleted in new
chr14	35046680	35079012	chr14:35046680-35079012	0	+	35046680	35046703	789624	4	404,174,67,86,	0,6597,30469,32246,
#Partially deleted in new
chr14	35053199	35081103	chr14:35053199-35081103	0	+	35053277	35081103	789624	4	252,67,98,82,	0,23950,25727,27822,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	35081080	35113130	chr14:35081080-35113130	0	+	35081080	35081228	789624	5	479,44,49,73,267,	0,18571,21600,29489,31783,
#Partially deleted in new
chr14	35085466	35122313	chr14:35085466-35122313	3	-	35085589	35121959	789624	13	312,60,138,137,76,56,133,71,98,113,105,128,412,	0,2484,5603,9581,11091,11242,13785,21837,22672,24352,25058,31143,36435,
#Partially deleted in new
chr14	35085466	35122261	chr14:35085466-35122261	0	-	35110618	35121959	789624	12	312,60,138,76,56,133,71,98,113,105,200,40,	0,2484,5603,11091,11242,13785,21837,22672,24352,25058,36435,36755,
#Partially deleted in new
chr14	35085472	35122447	chr14:35085472-35122447	0	-	35110618	35121959	789624	13	306,60,138,137,76,56,133,71,98,113,105,200,226,	0,2478,5597,9575,11085,11236,13779,21831,22666,24346,25052,36429,36749,
#Partially deleted in new
chr14	35085475	35095185	chr14:35085475-35095185	0	-	35085589	35095185	789624	3	303,60,138,	0,2475,9572,
#Partially deleted in new
chr14	35085491	35091179	chr14:35085491-35091179	0	-	35088016	35091179	789624	3	287,81,110,	0,2459,5578,
#Partially deleted in new
chr14	35085535	35122517	chr14:35085535-35122517	0	-	35110618	35121959	789624	12	243,60,138,137,76,56,133,71,98,113,105,616,	0,2415,5534,9512,11022,11173,13716,21768,22603,24283,24989,36366,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	35086034	35088059	chr14:35086034-35088059	3	+	35086034	35086034	8553170	1	2025,	0,
#Partially deleted in new
chr14	35095047	35121974	chr14:35095047-35121974	0	-	35110618	35121959	789624	8	137,76,56,133,98,84,105,73,	0,1510,1661,4204,13091,14800,15477,26854,
#Partially deleted in new
chr14	35095131	35110630	chr14:35095131-35110630	0	-	35095131	35110630	789624	8	53,76,56,133,71,98,83,106,	0,1426,1577,4120,12172,13007,14687,15393,
#Partially deleted in new
chr14	35096598	35121949	chr14:35096598-35121949	0	-	35110618	35121949	789624	7	35,56,133,71,98,105,48,	0,110,2653,10705,11540,13926,25303,
#Partially deleted in new
chr14	35096708	35121965	chr14:35096708-35121965	0	-	35096708	35121959	789624	8	56,133,71,98,29,105,128,64,	0,2543,10595,11430,13110,13816,19901,25193,
#Partially deleted in new
chr14	35098662	35121990	chr14:35098662-35121990	0	-	35110618	35121959	789624	4	722,113,105,89,	0,11156,11862,23239,
#Partially deleted in new
chr14	35098718	35121990	chr14:35098718-35121990	0	-	35098718	35098718	8553170	4	666,105,128,89,	0,11806,17891,23183,
#Partially deleted in new
chr14	35099271	35122014	chr14:35099271-35122014	0	-	35108206	35121959	789624	7	113,71,98,84,105,128,113,	0,8032,8867,10576,11253,17338,22630,
#Partially deleted in new
chr14	35099307	35121986	chr14:35099307-35121986	0	-	35110618	35121959	789624	6	77,71,142,113,105,85,	0,7996,8787,10511,11217,22594,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	35099675	35110726	chr14:35099675-35110726	0	+	35099675	35099675	8553170	4	3054,118,66,157,	0,6691,10219,10894,
#Partially deleted in new
chr14	35107302	35121984	chr14:35107302-35121984	0	-	35110618	35121959	789624	5	72,98,113,126,83,	0,836,2516,3222,14599,
#Partially deleted in new
chr14	35107305	35121970	chr14:35107305-35121970	0	-	35108206	35121959	789624	5	69,98,105,128,69,	0,833,3219,9304,14596,
#Partially deleted in new
chr14	35107647	35122313	chr14:35107647-35122313	1	-	35108067	35121959	789624	5	589,113,105,128,412,	0,2171,2877,8962,14254,
#Partially deleted in new
chr14	35108138	35122473	chr14:35108138-35122473	0	-	35108138	35121959	789624	6	98,113,105,128,200,252,	0,1680,2386,8471,13763,14083,
#Partially deleted in new
chr14	35109875	35121988	chr14:35109875-35121988	0	-	35116736	35121959	789624	5	56,105,128,103,87,	0,649,6734,7198,12026,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	35109922	35121979	chr14:35109922-35121979	0	-	35109922	35109922	8553170	3	707,128,78,	0,6687,11979,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	35121845	35127611	chr14:35121845-35127611	0	+	35121845	35121845	8553170	3	207,118,133,	0,2447,5633,
#Deleted in new
chr14	35121845	35123347	chr14:35121845-35123347	0	+	35123245	35123347	789624	2	207,396,	0,1106,
#Deleted in new
chr14	35122302	35123304	chr14:35122302-35123304	0	+	35123245	35123304	789624	2	199,353,	0,649,
#Partially deleted in new
chr14	35122546	35273690	chr14:35122546-35273690	1	+	35123530	35273566	0	8	89,727,48,133,108,149,196,256,	0,958,4188,4932,58123,144180,147854,150888,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr14	35122548	35317474	chr14:35122548-35317474	3	+	35123245	35273566	8553170	15	87,1280,48,133,108,149,196,857,166,95,82,156,179,95,226,	0,403,4186,4930,58121,144178,147852,150886,156004,185445,186365,188191,190332,191812,194700,
#Partially deleted in new
chr14	35122551	35274078	chr14:35122551-35274078	1	+	35127560	35273566	0	6	359,133,108,149,196,644,	0,4927,58118,144175,147849,150883,
#Deleted in new
chr14	35122553	35123315	chr14:35122553-35123315	0	+	35123245	35123315	789624	2	214,364,	0,398,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	35122563	35277614	chr14:35122563-35277614	1	+	35123245	35273566	0	7	72,1280,133,108,149,196,4180,	0,388,4915,58106,144163,147837,150871,
#Partially deleted in new
chr14	35122569	35274065	chr14:35122569-35274065	3	+	35123245	35273566	0	8	66,1280,48,133,108,149,196,631,	0,382,4165,4909,58100,144157,147831,150865,
#Partially deleted in new
chr14	35122676	35273670	chr14:35122676-35273670	1	+	35123245	35273566	0	7	130,1280,133,108,149,196,236,	0,275,4802,57993,144050,147724,150758,
#Partially deleted in new
chr14	35122721	35274017	chr14:35122721-35274017	1	+	35127560	35273566	0	7	189,48,133,108,149,196,583,	0,4013,4757,57948,144005,147679,150713,
#Partially deleted in new
chr14	35122758	35273485	chr14:35122758-35273485	0	+	35127560	35273485	789624	6	152,133,108,149,196,51,	0,4720,57911,143968,147642,150676,
#Partially deleted in new
chr14	35144020	35144480	chr14:35144020-35144480	7	-	35144020	35144020	16724991	1	460,	0,
#Deleted in new
chr14	35157903	35159099	chr14:35157903-35159099	7	-	35157903	35157903	16724991	1	1196,	0,
#Deleted in new
chr14	35219022	35219283	chr14:35219022-35219283	7	-	35219022	35219022	16724991	1	261,	0,
#Deleted in new
chr14	35222173	35222746	chr14:35222173-35222746	7	+	35222173	35222173	16724991	1	573,	0,
#Deleted in new
chr14	35235179	35235651	chr14:35235179-35235651	7	-	35235179	35235179	16724991	1	472,	0,
#Deleted in new
chr14	35262461	35263036	chr14:35262461-35263036	7	+	35262461	35262461	16724991	1	575,	0,
#Partially deleted in new
chr14	35278632	35317467	chr14:35278632-35317467	1	+	35278699	35317306	0	7	86,95,82,156,179,95,219,	0,29361,30281,32107,34248,35728,38616,
#Partially deleted in new
chr14	35292316	35317478	chr14:35292316-35317478	3	+	35308979	35317306	0	6	236,82,156,179,95,230,	0,16597,18423,20564,22044,24932,
#Deleted in new
chr14	35292316	35293080	chr14:35292316-35293080	1	+	35292476	35293080	789624	2	236,128,	0,636,
#Partially deleted in new
chr14	35292348	35317457	chr14:35292348-35317457	0	+	35292476	35308963	789624	6	204,82,156,179,95,209,	0,16565,18391,20532,22012,24900,
#Partially deleted in new
chr14	35292356	35317474	chr14:35292356-35317474	1	+	35292476	35317306	0	7	196,95,82,156,179,95,226,	0,15637,16557,18383,20524,22004,24892,
#Partially deleted in new
chr14	35292387	35311052	chr14:35292387-35311052	0	+	35292387	35292387	8553170	4	165,95,82,313,	0,15606,16526,18352,
#Partially deleted in new
chr14	35292392	35317474	chr14:35292392-35317474	0	+	35292476	35314398	789624	6	160,95,82,156,95,226,	0,15601,16521,18347,21968,24856,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	35292394	35308436	chr14:35292394-35308436	0	+	35292394	35292394	8553170	2	158,443,	0,15599,
#Partially deleted in new
chr14	35292397	35317347	chr14:35292397-35317347	1	+	35292476	35317306	789624	7	155,95,82,156,197,95,99,	0,15596,16516,18342,20465,21963,24851,
#Partially deleted in new
chr14	35292442	35312899	chr14:35292442-35312899	0	+	35292476	35293080	789624	6	110,325,95,82,156,19,	0,510,15551,16471,18297,20438,
#Partially deleted in new
chr14	35292450	35317493	chr14:35292450-35317493	1	+	35308979	35317306	0	7	150,95,82,156,179,95,245,	0,15543,16463,18289,20430,21910,24798,
#Partially deleted in new
chr14	35292472	35317419	chr14:35292472-35317419	1	+	35292476	35317272	789624	6	80,95,82,156,179,171,	0,15521,16441,18267,20408,24776,
#Partially deleted in new
chr14	35308774	35310827	chr14:35308774-35310827	0	+	35308774	35308774	8553170	2	221,88,	0,1965,
#Partially deleted in new
chr14	35310832	35317472	chr14:35310832-35317472	0	+	35310832	35317306	789624	4	63,41,95,224,	0,2048,3528,6416,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	35312742	35317472	chr14:35312742-35317472	0	+	35312742	35312742	8553170	1	4730,	0,
#Deleted in new
chr14	35362231	35363628	chr14:35362231-35363628	3	-	35362231	35362231	8553170	2	563,61,	0,1336,
#Partially deleted in new
chr14	35388120	35389069	chr14:35388120-35389069	7	-	35388120	35388120	16724991	1	949,	0,
#Deleted in new
chr14	35401510	35404746	chr14:35401510-35404746	3	-	35402012	35404644	0	6	550,270,89,211,109,329,	0,883,1260,1639,2179,2907,
#Deleted in new
chr14	35401533	35404716	chr14:35401533-35404716	0	-	35403338	35404644	789624	5	527,270,89,211,299,	0,860,1237,1616,2884,
#Deleted in new
chr14	35401539	35404746	chr14:35401539-35404746	1	-	35402012	35404644	789624	6	521,141,89,211,109,329,	0,854,1231,1610,2150,2878,
#Deleted in new
chr14	35401544	35404140	chr14:35401544-35404140	1	-	35402012	35403755	789624	5	516,270,89,211,451,	0,849,1226,1605,2145,
#Deleted in new
chr14	35401925	35403238	chr14:35401925-35403238	0	-	35401925	35401925	8553170	3	135,466,89,	0,468,1224,
#Deleted in new
chr14	35402441	35404700	chr14:35402441-35404700	0	-	35402441	35402441	8553170	4	222,211,109,283,	0,708,1248,1976,
#Deleted in new
chr14	35402652	35403430	chr14:35402652-35403430	0	-	35402652	35402652	8553170	3	11,89,281,	0,118,497,
#Deleted in new
chr14	35403014	35404742	chr14:35403014-35404742	0	-	35403014	35403014	8553170	3	346,109,325,	0,675,1403,
#Deleted in new
chr14	35403531	35404749	chr14:35403531-35404749	0	-	35403531	35403531	8553170	2	267,332,	0,886,
#Deleted in new
chr14	35403747	35404650	chr14:35403747-35404650	0	-	35403747	35404644	789624	3	51,20,141,	0,670,762,
#Deleted in new
chr14	35430259	35430631	chr14:35430259-35430631	7	+	35430259	35430259	16724991	1	372,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	35447002	35447625	chr14:35447002-35447625	3	-	35447002	35447002	8553170	2	82,422,	0,201,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	35468271	35469330	chr14:35468271-35469330	7	+	35468271	35468271	16724991	2	634,130,	0,929,
#Deleted in new
chr14	35511824	35513089	chr14:35511824-35513089	7	-	35511824	35511824	16724991	1	1265,	0,
#Deleted in new
chr14	35534041	35537054	chr14:35534041-35537054	3	+	35534252	35535953	789624	1	3013,	0,
#Partially deleted in new
chr14	35538351	35809304	chr14:35538351-35809304	3	-	35539541	35808835	789624	40	1339,125,128,159,156,124,72,862,184,135,69,111,109,59,126,129,156,99,194,153,177,217,125,168,162,238,130,149,138,198,240,209,139,116,178,44,58,50,111,575,	0,10758,32265,34208,57282,67234,87009,88738,96222,97112,113453,116015,117455,120786,126290,133037,134515,135828,136164,139598,145457,146577,148190,151484,183336,184675,186672,190010,200161,204016,210233,212130,213672,218441,222477,224358,232590,236654,237283,270378,
#Partially deleted in new
chr14	35538351	35809226	chr14:35538351-35809226	1	-	35548530	35808835	789624	41	1339,31,125,128,159,156,124,72,862,184,135,69,111,109,59,126,129,156,99,194,153,177,217,125,168,162,238,130,149,138,198,240,209,139,116,178,44,58,50,111,497,	0,10156,10758,32265,34208,57282,67234,87009,88738,96222,97112,113453,116015,117455,120786,126290,133037,134515,135828,136164,139598,145457,146577,148190,151484,183336,184675,186672,190010,200161,204016,210233,212130,213672,218441,222477,224358,232590,236654,237283,270378,
#Partially deleted in new
chr14	35538351	35627276	chr14:35538351-35627276	0	-	35539639	35627276	789624	10	1339,65,3,125,128,159,156,124,72,187,	0,3388,3675,10758,32265,34208,57282,67234,87009,88738,
#Partially deleted in new
chr14	35538356	35651876	chr14:35538356-35651876	0	-	35539541	35651876	789624	12	1334,3,125,128,159,156,124,72,862,184,135,72,	0,3670,10753,32260,34203,57277,67229,87004,88733,96217,97107,113448,
#Partially deleted in new
chr14	35539068	35809214	chr14:35539068-35809214	1	-	35548530	35808835	789624	41	622,31,125,128,159,156,124,72,862,184,135,69,111,109,59,126,129,156,99,194,153,177,217,125,1545,162,238,130,149,138,198,240,209,139,116,178,44,58,50,111,485,	0,9439,10041,31548,33491,56565,66517,86292,88021,95505,96395,112736,115298,116738,120069,125573,132320,133798,135111,135447,138881,144740,145860,147473,149390,182619,183958,185955,189293,199444,203299,209516,211413,212955,217724,221760,223641,231873,235937,236566,269661,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	35539159	35542524	chr14:35539159-35542524	0	-	35539159	35539159	8553170	2	531,498,	0,2867,
#Partially deleted in new
chr14	35539634	35808934	chr14:35539634-35808934	1	-	35548530	35808835	789624	42	56,31,125,128,159,156,124,72,862,184,135,69,111,109,59,126,129,156,99,194,153,177,217,82,82,168,162,238,130,149,138,198,240,209,139,116,178,44,58,50,111,205,	0,8873,9475,30982,32925,55999,65951,85726,87455,94939,95829,112170,114732,116172,119503,125007,131754,133232,134545,134881,138315,144174,145294,146907,148824,150201,182053,183392,185389,188727,198878,202733,208950,210847,212389,217158,221194,223075,231307,235371,236000,269095,
#Partially deleted in new
chr14	35548511	35808835	chr14:35548511-35808835	1	-	35548530	35808835	789624	41	27,125,128,159,156,124,72,862,184,135,69,111,109,59,126,129,156,99,194,153,177,217,125,168,141,162,238,130,149,138,198,240,209,139,116,178,44,58,50,111,106,	0,598,22105,24048,47122,57074,76849,78578,86062,86952,103293,105855,107295,110626,116130,122877,124355,125668,126004,129438,135297,136417,138030,141324,151650,173176,174515,176512,179850,190001,193856,200073,201970,203512,208281,212317,214198,222430,226494,227123,260218,
#Partially deleted in new
chr14	35549173	35572860	chr14:35549173-35572860	0	-	35549173	35549173	8553170	3	61,128,301,	0,21443,23386,
#Partially deleted in new
chr14	35564372	35572680	chr14:35564372-35572680	0	-	35564372	35564372	8553170	3	145,128,121,	0,6244,8187,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr14	35676228	35760894	chr14:35676228-35760894	0	-	35676228	35676228	8553170	17	1874,177,217,125,168,141,162,238,130,149,138,198,240,209,139,116,66,	0,7580,8700,10313,13607,23933,45459,46798,48795,52133,62284,66139,72356,74253,75795,80564,84600,
#Partially deleted in new
chr14	35683445	35684974	chr14:35683445-35684974	0	-	35683445	35683445	8553170	2	540,46,	0,1483,
#Partially deleted in new
chr14	35686541	35723876	chr14:35686541-35723876	0	-	35686541	35686541	8553170	4	125,168,162,850,	0,3294,35146,36485,
#Partially deleted in new
chr14	35689533	35723117	chr14:35689533-35723117	0	-	35689533	35689533	8553170	3	470,162,91,	0,32154,33493,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	35706633	35760857	chr14:35706633-35760857	0	-	35706633	35706633	8553170	12	950,162,238,130,149,138,198,240,209,139,116,29,	0,15054,16393,18390,21728,31879,35734,41951,43848,45390,50159,54195,
#Partially deleted in new
chr14	35728340	35742526	chr14:35728340-35742526	0	-	35728340	35728340	8553170	3	170,138,159,	0,10172,14027,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	35748399	35750529	chr14:35748399-35750529	0	-	35748399	35748399	8553170	2	425,48,	0,2082,
#Partially deleted in new
chr14	35748791	35756884	chr14:35748791-35756884	0	-	35748791	35748791	8553170	2	33,92,	0,8001,
#Partially deleted in new
chr14	35756326	35756463	chr14:35756326-35756463	3	+	35756326	35756326	8553170	1	137,	0,
#Deleted in new
chr14	35765794	35767110	chr14:35765794-35767110	7	+	35765794	35765794	16724991	1	1316,	0,
#Partially deleted in new
chr14	35807804	35809116	chr14:35807804-35809116	0	-	35807804	35807804	8553170	2	93,387,	0,925,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	35819223	35826765	chr14:35819223-35826765	3	-	35819223	35819223	8553170	2	924,1943,	0,5599,
#Deleted in new
chr14	35819836	35820220	chr14:35819836-35820220	7	+	35819836	35819836	16724991	1	384,	0,
#Partially deleted in new
chr14	35826317	35871963	chr14:35826317-35871963	3	+	35826516	35870477	789624	10	341,91,128,80,97,84,65,40,127,1604,	0,5092,6660,8526,36272,37552,38617,39404,41588,44042,
#Partially deleted in new
chr14	35826440	35870860	chr14:35826440-35870860	0	+	35826516	35829799	789624	11	218,113,91,128,80,97,84,65,40,127,501,	0,3354,4969,6537,8403,36149,37429,38494,39281,41465,43919,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	35826445	35858681	chr14:35826445-35858681	0	+	35826516	35829799	789624	5	213,113,91,128,105,	0,3349,4964,6532,32131,
#Partially deleted in new
chr14	35826456	35866051	chr14:35826456-35866051	0	+	35826456	35826456	8553170	8	202,91,128,80,97,84,65,330,	0,4953,6521,8387,36133,37413,38478,39265,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	35833000	35932325	chr14:35833000-35932325	0	+	35833000	35931771	789624	8	105,80,97,84,65,40,127,603,	0,1843,29589,30869,31934,32721,34905,98722,
#Partially deleted in new
chr14	35867776	35870393	chr14:35867776-35870393	0	+	35867776	35867776	8553170	2	256,34,	0,2583,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	35873856	35875303	chr14:35873856-35875303	3	+	35873856	35873856	8553170	2	77,524,	0,923,
#Deleted in new
chr14	35881000	35881709	chr14:35881000-35881709	7	+	35881000	35881000	16724991	1	709,	0,
#Partially deleted in new
chr14	35897981	36063743	chr14:35897981-36063743	3	+	35897981	35897981	8553170	4	114,128,175,60,	0,731,100428,165702,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	35947555	35950044	chr14:35947555-35950044	3	-	35947555	35947555	8553170	2	393,156,	0,2333,
#Deleted in new
chr14	36054196	36055313	chr14:36054196-36055313	7	-	36054196	36054196	16724991	1	1117,	0,
#Partially deleted in new
chr14	36061025	36067190	chr14:36061025-36067190	3	-	36061025	36061025	8553170	3	138,545,203,	0,2301,5962,
#Partially deleted in new
chr14	36070426	36165288	chr14:36070426-36165288	3	+	36070426	36070426	789624	3	259,147,177,	0,93693,94685,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	36136107	36176468	chr14:36136107-36176468	3	-	36136107	36136107	789624	4	249,91,60,171,	0,17696,26516,40190,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	36214606	36235608	chr14:36214606-36235608	3	+	36214606	36214606	8553170	3	452,142,285,	0,767,20717,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	36231554	36231774	chr14:36231554-36231774	3	-	36231554	36231554	8553170	1	220,	0,
#Partially deleted in new
chr14	36298557	36320676	chr14:36298557-36320676	3	-	36299082	36320588	789624	9	633,39,98,153,66,97,225,120,217,	0,2227,9534,13015,13401,15954,16133,18135,21902,
#Partially deleted in new
chr14	36298564	36320624	chr14:36298564-36320624	1	-	36305296	36320588	789624	10	626,42,217,98,153,66,97,225,120,165,	0,2220,6524,9527,13008,13394,15947,16126,18128,21895,
#Partially deleted in new
chr14	36298567	36320627	chr14:36298567-36320627	1	-	36299082	36320588	789624	9	620,39,98,153,66,97,225,120,168,	0,2217,9524,13005,13391,15944,16123,18125,21892,
#Partially deleted in new
chr14	36298589	36320607	chr14:36298589-36320607	1	-	36299170	36320588	789624	8	601,39,153,66,97,225,120,148,	0,2195,12983,13369,15922,16101,18103,21870,
#Deleted in new
chr14	36299116	36301020	chr14:36299116-36301020	0	-	36299116	36299116	8553170	2	74,236,	0,1668,
#Partially deleted in new
chr14	36299117	36311590	chr14:36299117-36311590	0	-	36299117	36299117	8553170	5	73,39,216,98,18,	0,1667,5971,8974,12455,
#Partially deleted in new
chr14	36308016	36320577	chr14:36308016-36320577	0	-	36308070	36320577	789624	7	173,153,66,97,225,120,118,	0,3556,3942,6495,6674,8676,12443,
#Partially deleted in new
chr14	36308156	36320597	chr14:36308156-36320597	0	-	36308156	36320588	789624	7	33,153,66,97,246,120,138,	0,3416,3802,6355,6534,8536,12303,
#Deleted in new
chr14	36311572	36314313	chr14:36311572-36314313	0	-	36311572	36311572	8553170	3	153,66,1024,	0,386,1717,
#Partially deleted in new
chr14	36311576	36320624	chr14:36311576-36320624	0	-	36311576	36320588	789624	5	149,66,97,225,165,	0,382,2935,3114,8883,
#Partially deleted in new
chr14	36314700	36319870	chr14:36314700-36319870	0	-	36314700	36319587	789624	3	215,120,286,	0,1992,4884,
#Partially deleted in new
chr14	36320752	36656163	chr14:36320752-36656163	3	+	36320752	36320752	8553170	4	160,90,72,1415,	0,19298,128013,333996,
#Deleted in new
chr14	36371164	36372383	chr14:36371164-36372383	7	+	36371164	36371164	16724991	1	1219,	0,
#Deleted in new
chr14	36371411	36371889	chr14:36371411-36371889	5	+	36371411	36371411	16724991	1	478,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	36405213	36405274	chr14:36405213-36405274	3	+	36405213	36405213	8553170	1	61,	0,
#Partially deleted in new
chr14	36473206	36519521	chr14:36473206-36519521	3	-	36473206	36473206	8553170	5	675,133,163,91,54,	0,3764,4509,17994,46261,
#Partially deleted in new
chr14	36473287	36513829	chr14:36473287-36513829	3	-	36473857	36513153	789624	4	594,128,91,718,	0,3683,17913,39824,
#Partially deleted in new
chr14	36473287	36477966	chr14:36473287-36477966	0	-	36473287	36473287	8553170	3	594,204,998,	0,1382,3681,
#Partially deleted in new
chr14	36473593	36513170	chr14:36473593-36513170	0	-	36474846	36513153	789624	5	288,204,128,91,59,	0,1076,3377,17607,39518,
#Partially deleted in new
chr14	36473701	36513531	chr14:36473701-36513531	0	-	36477780	36513153	789624	6	180,204,133,163,91,420,	0,968,3269,4014,17499,39410,
#Partially deleted in new
chr14	36474677	36513506	chr14:36474677-36513506	0	-	36474677	36474677	8553170	3	196,91,395,	0,16523,38434,
#Partially deleted in new
chr14	36474711	36513235	chr14:36474711-36513235	0	-	36477780	36513153	789624	5	162,154,163,91,124,	0,2233,3004,16489,38400,
#Partially deleted in new
chr14	36474748	36513775	chr14:36474748-36513775	0	-	36477780	36513153	789624	6	125,133,163,91,180,99,	0,2222,2967,16452,38363,38928,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	36476465	36513252	chr14:36476465-36513252	0	-	36476465	36476465	8553170	3	638,91,141,	0,14735,36646,
#Deleted in new
chr14	36477018	36477628	chr14:36477018-36477628	0	-	36477018	36477018	8553170	3	85,141,90,	0,282,520,
#Deleted in new
chr14	36516391	36520228	chr14:36516391-36520228	1	-	36517277	36520129	789624	3	1629,386,176,	0,2593,3661,
#Deleted in new
chr14	36516391	36519693	chr14:36516391-36519693	1	-	36517277	36519357	789624	2	1629,709,	0,2593,
#Deleted in new
chr14	36516416	36521149	chr14:36516416-36521149	3	-	36517277	36519357	789624	3	1604,386,593,	0,2568,4140,
#Deleted in new
chr14	36517216	36520134	chr14:36517216-36520134	1	-	36517277	36519357	789624	4	804,386,145,82,	0,1768,2251,2836,
#Deleted in new
chr14	36519277	36523016	chr14:36519277-36523016	3	+	36519277	36519277	789624	2	402,1373,	0,2366,
#Deleted in new
chr14	36519586	36520949	chr14:36519586-36520949	0	-	36519586	36520129	789624	3	26,234,393,	0,466,970,
#Deleted in new
chr14	36533505	36534538	chr14:36533505-36534538	7	-	36533505	36533505	16724991	2	592,116,	0,917,
#Deleted in new
chr14	36577542	36578005	chr14:36577542-36578005	7	-	36577542	36577542	16724991	1	463,	0,
#Deleted in new
chr14	36580578	36582607	chr14:36580578-36582607	3	-	36580901	36582389	789624	2	886,375,	0,1654,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	36593838	36594147	chr14:36593838-36594147	3	-	36593838	36593838	8553170	1	309,	0,
#Deleted in new
chr14	36647082	36658801	chr14:36647082-36658801	3	-	36647082	36647082	8553170	2	2355,258,	0,11461,
#Partially deleted in new
chr14	36657567	36677804	chr14:36657567-36677804	3	+	36662089	36676452	789624	5	333,397,627,140,1607,	0,4129,5329,8894,18630,
#Deleted in new
chr14	36657567	36662008	chr14:36657567-36662008	0	+	36657567	36657567	8553170	2	333,312,	0,4129,
#Deleted in new
chr14	36657670	36663143	chr14:36657670-36663143	0	+	36657670	36657670	8553170	3	217,89,247,	0,4334,5226,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	36661864	36679715	chr14:36661864-36679715	1	+	36662089	36676452	789624	4	229,627,140,3518,	0,1032,4597,14333,
#Partially deleted in new
chr14	36662573	36676406	chr14:36662573-36676406	1	+	36663453	36676288	789624	3	950,130,209,	0,3888,13624,
#Partially deleted in new
chr14	36665989	36676355	chr14:36665989-36676355	0	+	36665989	36665989	8553170	4	612,95,130,158,	0,5059,5990,10208,
#Partially deleted in new
chr14	36678430	37172423	chr14:36678430-37172423	1	-	36678483	37172350	789624	11	54,58,53,182,165,108,60,67,84,49,143,	0,2231,5397,6313,32887,47139,51076,56076,135487,196525,493850,
#Partially deleted in new
chr14	36679288	37172866	chr14:36679288-37172866	3	-	36680657	37172350	789624	10	1431,53,182,165,108,60,67,84,49,586,	0,4539,5455,32029,46281,50218,55218,134629,195667,492992,
#Partially deleted in new
chr14	36711316	36725679	chr14:36711316-36725679	0	-	36711316	36711316	8553170	2	166,110,	0,14253,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	36725152	36759718	chr14:36725152-36759718	0	-	36725152	36725152	8553170	5	316,108,60,67,69,	0,417,4354,9354,34497,
#Partially deleted in new
chr14	36788643	36807163	chr14:36788643-36807163	3	+	36788643	36788643	8553170	2	186,340,	0,18180,
#Partially deleted in new
chr14	36808870	36828729	chr14:36808870-36828729	3	+	36808870	36808870	8553170	2	246,308,	0,19551,
#Partially deleted in new
chr14	36870474	37172346	chr14:36870474-37172346	0	-	36870474	36870474	8553170	3	476,49,66,	0,4481,301806,
#Deleted in new
chr14	36952308	36952391	chr14:36952308-36952391	3	-	36952308	36952308	5263520	1	83,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	37097061	37098563	chr14:37097061-37098563	3	-	37097061	37097061	8553170	2	121,707,	0,795,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	37171887	37173811	chr14:37171887-37173811	3	+	37171887	37171887	789624	1	1924,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	37187218	37187314	chr14:37187218-37187314	3	+	37187218	37187218	8553170	1	96,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr14	37197912	37551258	chr14:37197912-37551258	1	+	37247888	37546971	789624	15	192,139,113,138,79,232,136,106,130,34,171,108,95,231,4354,	0,21640,29813,49190,49916,69025,70745,72507,87405,110143,110436,171604,224942,301995,348992,
#Partially deleted in new
chr14	37197912	37268718	chr14:37197912-37268718	0	+	37247888	37268718	789624	5	192,138,109,232,61,	0,49190,49886,69025,70745,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	37197949	37552361	chr14:37197949-37552361	3	+	37247888	37546971	789624	14	155,113,138,79,232,136,106,130,34,171,108,95,231,5457,	0,29776,49153,49879,68988,70708,72470,87368,110106,110399,171567,224905,301958,348955,
#Partially deleted in new
chr14	37198009	37547663	chr14:37198009-37547663	1	+	37267011	37546971	789624	14	95,138,79,75,232,136,106,130,34,171,108,95,231,759,	0,49093,49819,67197,68928,70648,72410,87308,110046,110339,171507,224845,301898,348895,
#Partially deleted in new
chr14	37198009	37385779	chr14:37198009-37385779	0	+	37198009	37198009	8553170	10	95,79,232,136,106,130,34,171,108,286,	0,49819,68928,70648,72410,87308,110046,110339,171507,187484,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr14	37198027	37546059	chr14:37198027-37546059	1	+	37267011	37545673	789624	16	77,127,139,138,79,219,136,106,130,34,171,108,95,231,97,395,	0,14202,21525,49075,49801,68923,70630,72392,87290,110028,110321,171489,224827,301880,325445,347637,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	37198036	37507790	chr14:37198036-37507790	0	+	37267011	37499955	789624	10	68,138,79,75,232,136,106,95,231,6274,	0,49066,49792,67170,68901,70621,72383,224818,301871,303480,
#Partially deleted in new
chr14	37198086	37268791	chr14:37198086-37268791	0	+	37247888	37268791	789624	5	192,138,79,232,134,	0,49016,49742,68851,70571,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr14	37219551	37551258	chr14:37219551-37551258	1	+	37247888	37546971	789624	13	140,138,79,232,136,106,130,34,171,108,95,231,4354,	0,27551,28277,47386,49106,50868,65766,88504,88797,149965,203303,280356,327353,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	37219551	37546053	chr14:37219551-37546053	1	+	37267011	37545673	789624	14	140,138,79,219,136,106,130,34,171,108,95,231,97,389,	0,27551,28277,47399,49106,50868,65766,88504,88797,149965,203303,280356,303921,326113,
#Partially deleted in new
chr14	37240423	37267169	chr14:37240423-37267169	0	+	37240423	37240423	8553170	4	146,138,79,232,	0,6679,7405,26514,
#Partially deleted in new
chr14	37267066	37278872	chr14:37267066-37278872	0	+	37267066	37267066	8553170	4	103,136,106,2543,	0,1591,3353,9263,
#Partially deleted in new
chr14	37308457	37369939	chr14:37308457-37369939	0	+	37308457	37308457	8553170	2	62,423,	0,61059,
#Deleted in new
chr14	37399799	37401900	chr14:37399799-37401900	0	+	37399799	37399799	8553170	1	2101,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	37434468	37434573	chr14:37434468-37434573	3	-	37434468	37434468	8553170	1	105,	0,
#Duplicated in new
chr14	37556157	37559484	chr14:37556157-37559484	3	-	37556157	37556157	8553170	2	210,169,	0,3158,
#Duplicated in new
chr14	37556157	37567095	chr14:37556157-37567095	1	-	37556157	37556157	8553170	2	210,153,	0,10785,
#Partially deleted in new
chr14	37564046	37579125	chr14:37564046-37579125	3	+	37564046	37564046	8553170	2	316,422,	0,14657,
#Partially deleted in new
chr14	37589983	37595034	chr14:37589983-37595034	3	-	37591364	37594972	789624	2	2728,134,	0,4917,
#Partially deleted in new
chr14	37591092	37594262	chr14:37591092-37594262	0	-	37591092	37591092	8553170	2	1619,187,	0,2983,
#Partially deleted in new
chr14	37592515	37595110	chr14:37592515-37595110	0	-	37594137	37594972	789624	3	196,101,210,	0,1560,2385,
#Partially deleted in new
chr14	37593874	37594950	chr14:37593874-37594950	0	-	37593874	37593874	8553170	2	739,50,	0,1026,
#Partially deleted in new
chr14	37595023	37596059	chr14:37595023-37596059	0	-	37595023	37595023	8553170	2	325,67,	0,969,
#Partially deleted in new
chr14	37595846	37622318	chr14:37595846-37622318	0	+	37622203	37622318	789624	3	162,80,269,	0,10816,26203,
#Partially deleted in new
chr14	37622064	37842463	chr14:37622064-37842463	3	+	37622064	37842291	789624	31	939,111,207,119,195,142,105,90,75,380,463,130,173,137,170,121,151,83,77,161,135,150,141,114,120,74,211,153,171,226,309,	0,58086,60693,74652,79267,92590,102833,113856,115595,116711,126874,127649,128988,131034,165403,168652,170199,173205,174229,174722,182615,184296,185255,186668,190249,195513,201682,204130,205131,219380,220090,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	37720424	37720561	chr14:37720424-37720561	3	+	37720424	37720424	8553170	1	137,	0,
#Partially deleted in new
chr14	37795307	37842348	chr14:37795307-37842348	1	+	37796309	37842291	789624	12	45,77,161,135,114,120,74,211,153,171,226,194,	0,986,1479,9372,13425,17006,22270,28439,30887,31888,46137,46847,
#Partially deleted in new
chr14	37795307	37842348	chr14:37795307-37842348	1	+	37796360	37842291	789624	14	45,77,161,135,150,141,114,120,74,211,153,171,226,194,	0,986,1479,9372,11053,12012,13425,17006,22270,28439,30887,31888,46137,46847,
#Partially deleted in new
chr14	37795307	37842348	chr14:37795307-37842348	0	+	37796309	37837492	789624	15	45,77,161,135,150,141,114,120,74,211,153,171,221,226,194,	0,986,1479,9372,11053,12012,13425,17006,22270,28439,30887,31888,42014,46137,46847,
#Partially deleted in new
chr14	37796293	37802390	chr14:37796293-37802390	0	+	37796293	37796293	8553170	3	77,161,297,	0,493,5800,
#Partially deleted in new
chr14	37827300	37841695	chr14:37827300-37841695	0	+	37827300	37837492	789624	3	66,221,251,	0,10021,14144,
#Deleted in new
chr14	37827797	37827904	chr14:37827797-37827904	3	-	37827797	37827797	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	37896059	37902124	chr14:37896059-37902124	3	-	37896059	37896059	789624	2	3351,109,	0,5956,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	37900875	37902372	chr14:37900875-37902372	0	-	37900875	37900875	8553170	2	417,357,	0,1140,
#Partially deleted in new
chr14	37971988	38041442	chr14:37971988-38041442	0	+	37971988	37971988	8553170	2	120,185,	0,69269,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	38003112	38004847	chr14:38003112-38004847	3	-	38003112	38003112	8553170	2	256,108,	0,1627,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	38034286	38194281	chr14:38034286-38194281	3	-	38034286	38034286	8553170	5	407,52,126,60,140,	0,2516,5018,134053,159855,
#Partially deleted in new
chr14	38038977	38091158	chr14:38038977-38091158	1	-	38038977	38038977	8553170	2	453,41,	0,52140,
#Deleted in new
chr14	38207998	38213067	chr14:38207998-38213067	3	+	38209389	38210565	789624	3	106,167,4022,	0,444,1047,
#Deleted in new
chr14	38254102	38256369	chr14:38254102-38256369	3	-	38254549	38256022	789624	1	2267,	0,
#Partially deleted in new
chr14	38290952	38311930	chr14:38290952-38311930	3	+	38290952	38290952	8553170	4	437,165,298,144,	0,1254,7561,20834,
#Deleted in new
chr14	38605254	38606098	chr14:38605254-38606098	7	+	38605254	38605254	16724991	1	844,	0,
#Deleted in new
chr14	38727274	38728481	chr14:38727274-38728481	7	+	38727274	38727274	16724991	1	1207,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	38749338	38948273	chr14:38749338-38948273	3	-	38749338	38749338	8553170	7	316,73,122,168,3663,58,96,	0,12763,13585,85892,86203,141402,198839,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	38749342	38948239	chr14:38749342-38948239	0	-	38749342	38749342	789624	6	312,168,3663,58,101,62,	0,85888,86199,141398,167439,198835,
#Partially deleted in new
chr14	38749357	38838458	chr14:38749357-38838458	0	-	38749357	38749357	8553170	6	297,67,73,122,168,2917,	0,10824,12744,13566,85873,86184,
#Deleted in new
chr14	38835388	38835788	chr14:38835388-38835788	7	+	38835388	38835388	16724991	1	400,	0,
#Deleted in new
chr14	38973398	38974085	chr14:38973398-38974085	7	-	38973398	38973398	16724991	1	687,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	38987280	38987383	chr14:38987280-38987383	3	+	38987280	38987280	8553170	1	103,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr14	39031918	39088723	chr14:39031918-39088723	1	-	39033238	39087005	0	16	1410,66,156,87,162,78,154,107,90,81,124,116,159,145,80,1200,	0,7112,8813,10867,13244,16733,23224,29846,31405,32994,35254,42496,44016,53843,55010,55605,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	39031918	39041433	chr14:39031918-39041433	0	-	39031918	39031918	8553170	2	1410,2403,	0,7112,
#Partially deleted in new
chr14	39031919	39103528	chr14:39031919-39103528	3	-	39033238	39096118	0	20	1409,66,156,87,162,78,154,107,90,81,124,116,159,145,80,237,87,58,242,497,	0,7111,8812,10866,13243,16732,23223,29845,31404,32993,35253,42495,44015,53842,55009,59557,60621,61267,63978,71112,
#Partially deleted in new
chr14	39032940	39103235	chr14:39032940-39103235	1	-	39033238	39096118	789624	19	388,66,156,87,162,78,154,107,90,81,124,116,159,145,80,237,58,242,204,	0,6090,7791,9845,12222,15711,22202,28824,30383,31972,34232,41474,42994,52821,53988,58536,60246,62957,70091,
#Partially deleted in new
chr14	39033203	39041244	chr14:39033203-39041244	0	-	39033203	39033203	8553170	3	125,66,513,	0,5827,7528,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	39064548	39067211	chr14:39064548-39067211	0	-	39064548	39064548	8553170	2	445,39,	0,2624,
#Deleted in new
chr14	39090900	39091101	chr14:39090900-39091101	7	+	39090900	39090900	16724991	1	201,	0,
#Deleted in new
chr14	39091369	39092594	chr14:39091369-39092594	0	-	39091369	39091369	8553170	2	344,54,	0,1171,
#Partially deleted in new
chr14	39091572	39103652	chr14:39091572-39103652	0	-	39091572	39096118	789624	5	141,87,58,242,60,	0,968,1614,4325,12020,
#Partially deleted in new
chr14	39091657	39103233	chr14:39091657-39103233	0	-	39091657	39096118	789624	6	56,87,58,242,92,36,	0,883,1529,4240,11374,11540,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	39092760	39103212	chr14:39092760-39103212	1	-	39093138	39096118	789624	3	484,242,181,	0,3137,10271,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	39093184	39109646	chr14:39093184-39109646	0	-	39093184	39096118	789624	4	60,242,71,174,	0,2713,10408,16288,
#Partially deleted in new
chr14	39094897	39103243	chr14:39094897-39103243	1	-	39094977	39096118	789624	3	120,242,212,	0,1000,8134,
#Partially deleted in new
chr14	39094897	39103233	chr14:39094897-39103233	1	-	39094977	39096118	789624	3	117,242,202,	0,1000,8134,
#Partially deleted in new
chr14	39094977	39096118	chr14:39094977-39096118	1	-	39094977	39096118	789624	2	40,221,	0,920,
#Partially deleted in new
chr14	39095998	39103829	chr14:39095998-39103829	0	-	39095998	39096118	789624	3	141,197,237,	0,7033,7594,
#Deleted in new
chr14	39103139	39103812	chr14:39103139-39103812	3	+	39103139	39103139	789624	2	232,268,	0,405,
#Deleted in new
chr14	39108341	39108707	chr14:39108341-39108707	7	+	39108341	39108341	16724991	1	366,	0,
#Partially deleted in new
chr14	39114222	39136973	chr14:39114222-39136973	3	+	39114305	39136479	0	10	253,85,90,60,114,45,69,111,59,534,	0,606,3776,4317,8207,10769,14057,17735,19438,22217,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	39114284	39136973	chr14:39114284-39136973	0	+	39114305	39121951	789624	11	191,85,90,60,118,114,45,69,111,59,534,	0,544,3714,4255,7622,8145,10707,13995,17673,19376,22155,
#Partially deleted in new
chr14	39114305	39136775	chr14:39114305-39136775	1	+	39114305	39136479	0	9	170,85,90,60,114,69,111,59,336,	0,523,3693,4234,8124,13974,17652,19355,22134,
#Partially deleted in new
chr14	39114305	39136496	chr14:39114305-39136496	1	+	39114305	39136448	0	9	170,85,90,60,114,45,69,111,57,	0,523,3693,4234,8124,10686,13974,17652,22134,
#Partially deleted in new
chr14	39114305	39136541	chr14:39114305-39136541	0	+	39114305	39114873	0	10	90,85,90,60,114,45,69,111,59,102,	0,523,3693,4234,8124,10686,13974,17652,19355,22134,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	39114316	39136624	chr14:39114316-39136624	0	+	39114338	39135988	8553170	11	159,85,90,60,114,45,69,111,59,225,185,	0,512,3682,4223,8113,10675,13963,17641,19344,21614,22123,
#Partially deleted in new
chr14	39114319	39132023	chr14:39114319-39132023	0	+	39114319	39114863	789624	8	101,85,90,60,114,45,69,66,	0,509,3679,4220,8110,10672,13960,17638,
#Partially deleted in new
chr14	39114322	39132068	chr14:39114322-39132068	0	+	39114322	39132068	789624	7	153,85,90,60,114,45,111,	0,506,3676,4217,8107,10669,17635,
#Partially deleted in new
chr14	39114323	39122701	chr14:39114323-39122701	0	+	39114323	39114323	8553170	5	152,85,90,60,272,	0,505,3675,4216,8106,
#Partially deleted in new
chr14	39114330	39128341	chr14:39114330-39128341	0	+	39114330	39128341	789624	7	136,85,90,60,114,45,62,	0,498,3668,4209,8099,10661,13949,
#Partially deleted in new
chr14	39131772	39136746	chr14:39131772-39136746	0	+	39131772	39131772	8553170	3	296,59,307,	0,1888,4667,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	39131786	39133961	chr14:39131786-39133961	0	+	39131786	39131786	8553170	2	282,301,	0,1874,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	39133660	39134370	chr14:39133660-39134370	0	+	39133660	39133729	789624	2	99,550,	0,160,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	39147810	39170532	chr14:39147810-39170532	0	-	39147810	39147810	8553170	5	2571,94,84,1266,518,	0,3935,6400,10474,22204,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	39147811	39170322	chr14:39147811-39170322	3	-	39150349	39170095	0	6	2570,94,84,118,68,308,	0,3934,6399,10473,11671,22203,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	39147811	39170393	chr14:39147811-39170393	1	-	39150349	39170095	0	5	2570,94,118,68,379,	0,3934,10473,11671,22203,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	39147832	39151363	chr14:39147832-39151363	3	+	39147832	39147832	8553170	2	2967,187,	0,3344,
#Partially deleted in new
chr14	39149989	39170314	chr14:39149989-39170314	0	-	39149989	39149989	8553170	4	392,94,84,300,	0,1756,4221,20025,
#Partially deleted in new
chr14	39150117	39170353	chr14:39150117-39170353	0	-	39159478	39170095	789624	6	264,94,84,118,101,339,	0,1628,4093,8167,9332,19897,
#Partially deleted in new
chr14	39151796	39170329	chr14:39151796-39170329	0	-	39151796	39170095	789624	4	43,118,68,312,	0,6488,7686,18221,
#Partially deleted in new
chr14	39151810	39170430	chr14:39151810-39170430	0	-	39159478	39170095	789624	4	29,118,101,416,	0,6474,7639,18204,
#Partially deleted in new
chr14	39156741	39157852	chr14:39156741-39157852	7	+	39156741	39156741	16724991	2	85,655,	0,456,
#Deleted in new
chr14	39174884	39175880	chr14:39174884-39175880	3	-	39174884	39174884	8553170	2	428,102,	0,894,
#Partially deleted in new
chr14	39175182	39179246	chr14:39175182-39179246	1	+	39175279	39177888	789624	6	210,72,69,73,76,156,	0,895,1344,2229,2658,3908,
#Partially deleted in new
chr14	39175212	39183218	chr14:39175212-39183218	3	+	39175279	39181863	789624	9	180,72,69,73,95,76,156,139,2716,	0,865,1314,2199,2380,2628,3878,4111,5290,
#Partially deleted in new
chr14	39175229	39177708	chr14:39175229-39177708	1	+	39175279	39177511	789624	4	163,72,69,297,	0,848,1297,2182,
#Deleted in new
chr14	39175281	39176590	chr14:39175281-39176590	0	+	39175281	39175281	8553170	2	111,513,	0,796,
#Partially deleted in new
chr14	39179001	39180701	chr14:39179001-39180701	0	+	39179001	39179001	8553170	3	245,139,199,	0,322,1501,
#Partially deleted in new
chr14	39179089	39182750	chr14:39179089-39182750	0	+	39179089	39179089	8553170	4	157,139,174,442,	0,234,1413,3219,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	39211780	39212255	chr14:39211780-39212255	7	+	39211780	39211780	16724991	1	475,	0,
#Partially deleted in new
chr14	39215064	39216335	chr14:39215064-39216335	7	+	39215064	39215064	16724991	1	1271,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	39230230	39240588	chr14:39230230-39240588	0	+	39234114	39240588	789624	5	27,150,215,134,28,	0,269,3784,6691,10330,
#Partially deleted in new
chr14	39233901	39350423	chr14:39233901-39350423	1	+	39234114	39350264	789624	28	328,134,87,1231,101,132,22,89,78,111,72,105,123,121,47,91,139,102,61,36,68,83,129,159,123,59,235,326,	0,3020,6659,13009,19169,43032,45435,45547,57117,59369,60098,61023,65962,68227,69576,70389,74547,79438,80837,81781,84042,85307,87026,92962,112002,113811,114841,116196,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	39233909	39237270	chr14:39233909-39237270	0	+	39233909	39233909	8553170	3	320,134,125,	0,3012,3236,
#Partially deleted in new
chr14	39233915	39253639	chr14:39233915-39253639	1	+	39234114	39253249	789624	6	314,134,87,1231,219,569,	0,3006,6645,12995,18832,19155,
#Partially deleted in new
chr14	39234114	39350264	chr14:39234114-39350264	3	+	39234114	39350264	789624	29	115,134,87,1231,219,101,132,22,89,78,111,72,105,123,121,47,91,139,102,61,36,68,83,129,159,123,59,235,167,	0,2807,6446,12796,18633,18956,42819,45222,45334,56904,59156,59885,60810,65749,68014,69363,70176,74334,79225,80624,81568,83829,85094,86813,92749,111789,113598,114628,115983,
#Partially deleted in new
chr14	39265283	39293311	chr14:39265283-39293311	0	+	39265394	39293311	789624	7	138,132,22,89,78,27,41,	0,11650,14053,14165,25735,27396,27987,
#Partially deleted in new
chr14	39265290	39294072	chr14:39265290-39294072	0	+	39265394	39294072	789624	6	131,132,22,89,111,73,	0,11643,14046,14158,27980,28709,
#Partially deleted in new
chr14	39265291	39350694	chr14:39265291-39350694	1	+	39265394	39350264	789624	24	130,132,22,89,78,111,72,105,123,121,47,91,139,102,61,36,68,83,129,159,123,59,235,597,	0,11642,14045,14157,25727,27979,28708,29633,34572,36837,38186,38999,43157,48048,49447,50391,52652,53917,55636,61572,80612,82421,83451,84806,
#Partially deleted in new
chr14	39265308	39350690	chr14:39265308-39350690	1	+	39279471	39350264	789624	23	113,132,89,78,111,72,105,123,121,47,91,139,102,61,36,68,83,129,159,123,59,235,593,	0,11625,14140,25710,27962,28691,29616,34555,36820,38169,38982,43140,48031,49430,50374,52635,53900,55619,61555,80595,82404,83434,84789,
#Deleted in new
chr14	39265702	39267061	chr14:39265702-39267061	3	-	39265702	39265702	789624	1	1359,	0,
#Partially deleted in new
chr14	39265967	39350423	chr14:39265967-39350423	1	+	39276957	39350264	789624	24	560,132,22,89,78,111,72,105,123,121,47,91,139,102,61,36,68,83,129,159,123,59,235,326,	0,10966,13369,13481,25051,27303,28032,28957,33896,36161,37510,38323,42481,47372,48771,49715,51976,53241,54960,60896,79936,81745,82775,84130,
#Deleted in new
chr14	39266419	39267061	chr14:39266419-39267061	1	-	39266419	39266419	8553170	2	365,102,	0,540,
#Partially deleted in new
chr14	39267085	39294053	chr14:39267085-39294053	0	+	39267085	39267085	8553170	6	104,132,89,78,111,54,	0,9848,12363,23933,26185,26914,
#Partially deleted in new
chr14	39267123	39351193	chr14:39267123-39351193	1	+	39267459	39350264	789624	24	399,132,22,89,93,111,72,105,123,121,47,91,139,102,61,36,68,83,129,159,123,59,235,1096,	0,9810,12213,12325,23895,26147,26876,27801,32740,35005,36354,37167,41325,46216,47615,48559,50820,52085,53804,59740,78780,80589,81619,82974,
#Partially deleted in new
chr14	39267145	39351395	chr14:39267145-39351395	1	+	39267459	39350264	789624	24	377,132,22,89,78,111,72,105,123,121,47,91,139,102,61,36,68,83,129,159,123,59,235,1298,	0,9788,12191,12303,23873,26125,26854,27779,32718,34983,36332,37145,41303,46194,47593,48537,50798,52063,53782,59718,78758,80567,81597,82952,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr14	39267245	39388513	chr14:39267245-39388513	1	+	39267459	39386952	789624	24	277,132,22,89,78,111,72,105,123,121,47,91,139,102,61,36,68,83,129,159,123,59,235,1629,	0,9688,12091,12203,23773,26025,26754,27679,32618,34883,36232,37045,41203,46094,47493,48437,50698,51963,53682,59618,78658,80467,81497,119639,
#Partially deleted in new
chr14	39267410	39350421	chr14:39267410-39350421	1	+	39279471	39350264	789624	24	112,22,22,89,93,111,72,105,123,121,47,91,139,102,61,36,68,83,129,159,123,59,235,324,	0,9523,11926,12038,23608,25860,26589,27514,32453,34718,36067,36880,41038,45929,47328,48272,50533,51798,53517,59453,78493,80302,81332,82687,
#Partially deleted in new
chr14	39267413	39350694	chr14:39267413-39350694	1	+	39267459	39350264	789624	23	109,132,22,89,78,111,72,105,123,121,47,91,139,102,61,36,68,83,159,123,59,235,597,	0,9520,11923,12035,23605,25857,26586,27511,32450,34715,36064,36877,41035,45926,47325,48269,50530,51795,59450,78490,80299,81329,82684,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr14	39276225	39350645	chr14:39276225-39350645	1	+	39276957	39350264	789624	23	840,22,89,78,111,72,105,123,121,47,91,139,102,61,36,68,83,129,159,123,59,235,548,	0,3111,3223,14793,17045,17774,18699,23638,25903,27252,28065,32223,37114,38513,39457,41718,42983,44702,50638,69678,71487,72517,73872,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	39313400	39315302	chr14:39313400-39315302	0	+	39313400	39313400	8553170	2	41,564,	0,1338,
#Partially deleted in new
chr14	39347544	39350645	chr14:39347544-39350645	0	+	39347544	39347544	8553170	3	227,235,548,	0,1198,2553,
#Deleted in new
chr14	39370278	39370756	chr14:39370278-39370756	7	-	39370278	39370278	16724991	1	478,	0,
#Partially deleted in new
chr14	39385403	39387102	chr14:39385403-39387102	7	-	39385403	39385403	16724991	1	1699,	0,
#Partially deleted in new
chr14	39397668	39432500	chr14:39397668-39432500	3	-	39399515	39432162	789624	4	2119,686,111,937,	0,3507,4732,33895,
#Partially deleted in new
chr14	39399565	39431875	chr14:39399565-39431875	1	-	39399732	39431778	789624	2	222,312,	0,31998,
#Deleted in new
chr14	39431771	39432466	chr14:39431771-39432466	0	-	39431771	39431778	8553170	2	199,206,	0,489,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	39474839	39513780	chr14:39474839-39513780	3	+	39474839	39474839	8553170	3	116,302,164,	0,17415,38777,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	39474855	39492770	chr14:39474855-39492770	1	+	39474855	39474855	8553170	3	100,241,516,	0,10161,17399,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	39474934	39493512	chr14:39474934-39493512	0	+	39474934	39474934	8553170	3	21,302,172,	0,17320,18406,
#Deleted in new
chr14	40386251	40386794	chr14:40386251-40386794	3	+	40386251	40386251	8553170	2	192,261,	0,282,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	40387557	40389140	chr14:40387557-40389140	3	+	40387557	40387557	8553170	2	483,64,	0,1519,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	40954897	40975877	chr14:40954897-40975877	3	+	40954897	40954897	8553170	4	55,53,51,537,	0,7892,19442,20443,
#Deleted in new
chr14	41296285	41298734	chr14:41296285-41298734	7	+	41296285	41296285	16724991	1	2449,	0,
#Deleted in new
chr14	41514971	41515350	chr14:41514971-41515350	3	-	41514971	41514971	8553170	1	379,	0,
#Deleted in new
chr14	41555661	41556055	chr14:41555661-41556055	7	-	41555661	41555661	16724991	1	394,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	41587860	41604856	chr14:41587860-41604856	3	-	41587860	41587860	8553170	2	427,103,	0,16893,
#Deleted in new
chr14	41594462	41594591	chr14:41594462-41594591	3	+	41594462	41594462	8553170	1	129,	0,
#Partially deleted in new
chr14	41607569	41904549	chr14:41607569-41904549	3	+	41886625	41904175	0	6	993,176,1405,713,44,392,	0,159284,279036,283680,291347,296588,
#Partially deleted in new
chr14	41608268	41766962	chr14:41608268-41766962	0	+	41608268	41608268	8553170	4	294,17,162,109,	0,123068,125202,158585,
#Deleted in new
chr14	41608377	41610127	chr14:41608377-41610127	0	+	41608377	41608377	8553170	2	185,19,	0,1731,
#Partially deleted in new
chr14	41608414	41904549	chr14:41608414-41904549	1	+	41886625	41904170	789624	4	148,176,1405,392,	0,158439,278191,295743,
#Partially deleted in new
chr14	41699426	41904549	chr14:41699426-41904549	1	+	41886625	41898932	789624	7	2120,17,99,176,1405,44,392,	0,31910,32345,67427,187179,199490,204731,
#Deleted in new
chr14	41742638	41742963	chr14:41742638-41742963	7	+	41742638	41742638	16724991	1	325,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	42412572	42528888	chr14:42412572-42528888	3	+	42412572	42412572	8553170	2	634,220,	0,116096,
#Partially deleted in new
chr14	42608867	42609577	chr14:42608867-42609577	7	+	42608867	42608867	16724991	1	710,	0,
#Partially deleted in new
chr14	42657762	42657918	chr14:42657762-42657918	7	-	42657762	42657762	16724991	1	156,	0,
#Partially deleted in new
chr14	42807377	42808112	chr14:42807377-42808112	7	-	42807377	42807377	16724991	1	735,	0,
#Partially deleted in new
chr14	42989200	42989483	chr14:42989200-42989483	7	+	42989200	42989200	16724991	1	283,	0,
#Deleted in new
chr14	43274823	43275697	chr14:43274823-43275697	7	+	43274823	43274823	16724991	1	874,	0,
#Deleted in new
chr14	43300262	43300595	chr14:43300262-43300595	7	+	43300262	43300262	16724991	1	333,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	43540882	43541826	chr14:43540882-43541826	7	-	43540882	43540882	16724991	1	944,	0,
#Deleted in new
chr14	43592141	43592262	chr14:43592141-43592262	7	-	43592141	43592141	16724991	1	121,	0,
#Deleted in new
chr14	43595135	43596683	chr14:43595135-43596683	7	+	43595135	43595135	16724991	1	1548,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	43995780	44384545	chr14:43995780-44384545	3	-	43995780	43995780	8553170	3	63,125,69,	0,53602,388696,
#Deleted in new
chr14	44077533	44077884	chr14:44077533-44077884	7	-	44077533	44077533	16724991	1	351,	0,
#Deleted in new
chr14	44120209	44120761	chr14:44120209-44120761	7	-	44120209	44120209	16724991	1	552,	0,
#Deleted in new
chr14	44290996	44291718	chr14:44290996-44291718	7	-	44290996	44290996	16724991	1	722,	0,
#Deleted in new
chr14	44392530	44393711	chr14:44392530-44393711	3	-	44392530	44392530	8553170	2	160,103,	0,1078,
#Deleted in new
chr14	44392541	44393716	chr14:44392541-44393716	0	-	44392541	44392541	8553170	2	149,99,	0,1076,
#Partially deleted in new
chr14	44444746	44480617	chr14:44444746-44480617	3	-	44444746	44444746	8553170	4	76,146,123,108,	0,1901,33982,35763,
#Partially deleted in new
chr14	44466957	44480618	chr14:44466957-44480618	1	-	44466957	44466957	8553170	3	212,132,109,	0,11762,13552,
#Deleted in new
chr14	44504341	44507279	chr14:44504341-44507279	3	-	44504509	44506987	789624	1	2938,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	44509002	44538511	chr14:44509002-44538511	0	+	44509002	44509002	8553170	2	229,238,	0,29271,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	44763156	44782829	chr14:44763156-44782829	3	-	44763156	44763156	8553170	4	2470,24,135,275,	0,3154,4838,19398,
#Deleted in new
chr14	44860315	44866247	chr14:44860315-44866247	7	-	44860315	44860315	16724991	1	5932,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	44876873	44897077	chr14:44876873-44897077	3	-	44876873	44876873	8553170	2	627,66,	0,20138,
#Deleted in new
chr14	44887433	44887741	chr14:44887433-44887741	7	-	44887433	44887433	16724991	1	308,	0,
#Deleted in new
chr14	44888555	44889041	chr14:44888555-44889041	7	-	44888555	44888555	16724991	1	486,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	44897294	44907257	chr14:44897294-44907257	3	+	44900435	44905550	789624	5	274,525,90,135,1891,	0,3140,5912,7100,8072,
#Partially deleted in new
chr14	44897334	44905569	chr14:44897334-44905569	1	+	44900435	44905550	789624	4	234,525,135,203,	0,3100,7060,8032,
#Partially deleted in new
chr14	44898907	44911863	chr14:44898907-44911863	3	-	44898907	44898907	789624	3	169,84,107,	0,322,12849,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	44900413	44907256	chr14:44900413-44907256	0	+	44900413	44900413	8553170	3	546,90,2862,	0,2793,3981,
#Partially deleted in new
chr14	44900755	44904529	chr14:44900755-44904529	0	+	44900755	44900755	8553170	4	204,90,91,135,	0,2451,2767,3639,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	44924318	44961965	chr14:44924318-44961965	3	-	44929027	44945928	789624	5	4873,209,444,899,120,	0,7014,9796,20711,37527,
#Partially deleted in new
chr14	44928812	44961132	chr14:44928812-44961132	1	-	44929027	44960928	789624	5	379,209,444,899,246,	0,2520,5302,16217,32074,
#Partially deleted in new
chr14	44945440	44961967	chr14:44945440-44961967	0	-	44945440	44945928	789624	2	488,371,	0,16156,
#Partially deleted in new
chr14	44945676	45042308	chr14:44945676-45042308	0	-	44945676	44945928	789624	3	252,101,193,	0,32521,96439,
#Partially deleted in new
chr14	44945791	44962190	chr14:44945791-44962190	0	-	44945791	44945928	789624	3	137,174,345,	0,13549,16054,
#Partially deleted in new
chr14	44962207	45074431	chr14:44962207-45074431	1	+	44962421	45073561	789624	19	2260,157,135,306,260,233,101,90,176,154,154,106,236,127,119,190,220,87,1136,	0,33538,37155,41853,43800,46705,49767,63575,65091,65968,70015,81478,82427,90228,92223,104370,106216,109504,111088,
#Partially deleted in new
chr14	44962213	45008147	chr14:44962213-45008147	0	+	44962213	44962213	8553170	5	2254,157,135,306,2140,	0,33532,37149,41847,43794,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	44962218	44997404	chr14:44962218-44997404	0	+	44962218	44962218	8553170	2	2249,1659,	0,33527,
#Partially deleted in new
chr14	44962238	45074431	chr14:44962238-45074431	3	+	44962421	45073561	789624	20	2229,157,135,306,260,233,101,90,176,154,154,106,236,159,127,119,190,220,87,1136,	0,33507,37124,41822,43769,46674,49736,63544,65060,65937,69984,81447,82396,84306,90197,92192,104339,106185,109473,111057,
#Partially deleted in new
chr14	44963850	45042322	chr14:44963850-45042322	0	-	44963850	44963850	8553170	3	242,101,207,	0,14347,78265,
#Partially deleted in new
chr14	44995479	45004288	chr14:44995479-45004288	0	+	44995500	45004288	789624	4	24,157,135,228,	0,266,3883,8581,
#Partially deleted in new
chr14	44995818	45006267	chr14:44995818-45006267	0	+	44995818	45006267	789624	3	84,135,260,	0,3544,10189,
#Partially deleted in new
chr14	45011886	45028296	chr14:45011886-45028296	0	+	45011886	45011886	8553170	4	189,90,176,121,	0,13896,15412,16289,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	45025472	45027334	chr14:45025472-45027334	0	+	45025472	45025472	8553170	2	400,36,	0,1826,
#Partially deleted in new
chr14	45068441	45073803	chr14:45068441-45073803	0	+	45068441	45073561	789624	2	202,508,	0,4854,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	45079848	45080189	chr14:45079848-45080189	3	+	45079848	45079848	8553170	1	341,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	45083044	45083977	chr14:45083044-45083977	3	-	45083044	45083044	8553170	2	343,506,	0,427,
#Partially deleted in new
chr14	45084098	45115601	chr14:45084098-45115601	3	+	45095239	45114913	789624	14	151,343,126,119,168,166,108,165,127,269,185,75,121,745,	0,11122,12004,12788,18430,23352,24316,25517,25995,26450,28219,30084,30395,30758,
#Partially deleted in new
chr14	45084106	45096228	chr14:45084106-45096228	0	+	45095239	45096228	789624	3	143,313,126,	0,11114,11996,
#Partially deleted in new
chr14	45084117	45115601	chr14:45084117-45115601	0	+	45084117	45084117	8553170	13	132,343,903,168,166,108,165,127,269,185,75,121,745,	0,11103,11985,18411,23333,24297,25498,25976,26431,28200,30065,30376,30739,
#Partially deleted in new
chr14	45084117	45095733	chr14:45084117-45095733	0	+	45084117	45084117	8553170	2	132,513,	0,11103,
#Partially deleted in new
chr14	45084127	45115601	chr14:45084127-45115601	0	+	45095239	45096432	789624	15	122,343,126,335,119,168,166,108,165,127,269,185,75,121,745,	0,11093,11975,12296,12759,18401,23323,24287,25488,25966,26421,28190,30055,30366,30729,
#Deleted in new
chr14	45088242	45088308	chr14:45088242-45088308	3	+	45088242	45088242	8553170	1	66,	0,
#Partially deleted in new
chr14	45095220	45115634	chr14:45095220-45115634	0	+	45095239	45096432	789624	15	343,126,69,163,119,168,166,108,165,127,269,185,75,121,778,	0,882,1203,1375,1666,7308,12230,13194,14395,14873,15328,17097,18962,19273,19636,
#Partially deleted in new
chr14	45095238	45115601	chr14:45095238-45115601	0	+	45095239	45096432	789624	16	325,126,69,163,119,168,166,108,165,100,127,215,185,75,121,745,	0,864,1185,1357,1648,7290,12212,13176,14377,14655,14855,15364,17079,18944,19255,19618,
#Partially deleted in new
chr14	45095445	45096866	chr14:45095445-45096866	0	+	45095445	45095445	8553170	3	118,126,443,	0,657,978,
#Partially deleted in new
chr14	45096197	45116282	chr14:45096197-45116282	0	+	45096197	45096616	789624	14	31,163,119,168,166,108,165,100,127,269,185,75,121,1426,	0,398,689,6331,11253,12217,13418,13696,13896,14351,16120,17985,18296,18659,
#Partially deleted in new
chr14	45096905	45110176	chr14:45096905-45110176	0	+	45096905	45108418	789624	6	100,168,108,165,100,83,	0,5623,11509,12710,12988,13188,
#Partially deleted in new
chr14	45109731	45115596	chr14:45109731-45115596	0	+	45109731	45109731	8553170	5	489,269,185,75,1103,	0,817,2586,4451,4762,
#Partially deleted in new
chr14	45109742	45110669	chr14:45109742-45110669	0	+	45109742	45109742	8553170	3	251,127,121,	0,351,806,
#Deleted in new
chr14	45110882	45110968	chr14:45110882-45110968	3	+	45110882	45110882	789624	1	86,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	45115599	45135319	chr14:45115599-45135319	3	-	45116197	45134456	0	8	653,98,68,136,108,102,458,61,	0,2428,5287,5885,14194,15099,18749,19659,
#Partially deleted in new
chr14	45115599	45134529	chr14:45115599-45134529	1	-	45116197	45134456	0	7	653,98,68,136,108,102,181,	0,2428,5287,5885,14194,15099,18749,
#Partially deleted in new
chr14	45121587	45131261	chr14:45121587-45131261	0	-	45121587	45121587	8553170	3	33,108,563,	0,8206,9111,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	45135939	45167423	chr14:45135939-45167423	1	+	45136031	45167171	0	11	600,173,78,159,132,133,126,87,185,207,474,	0,1129,4692,12897,15457,17980,18757,19433,23156,28419,31010,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr14	45135946	45200887	chr14:45135946-45200887	3	+	45136031	45200008	0	23	593,173,78,159,132,133,126,87,185,207,214,158,156,1906,95,69,129,157,107,561,376,292,1018,	0,1122,4685,12890,15450,17973,18750,19426,23149,28412,31003,34642,37108,39124,45483,45690,47827,49270,51834,52855,60225,62697,63923,
#Partially deleted in new
chr14	45135953	45200028	chr14:45135953-45200028	1	+	45136031	45200008	0	22	586,173,159,132,133,126,87,185,207,214,158,156,1906,95,69,129,157,107,561,376,292,159,	0,1115,12883,15443,17966,18743,19419,23142,28405,30996,34635,37101,39117,45476,45683,47820,49263,51827,52848,60218,62690,63916,
#Deleted in new
chr14	45136513	45137959	chr14:45136513-45137959	0	+	45136513	45136513	8553170	2	26,891,	0,555,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr14	45154758	45200890	chr14:45154758-45200890	0	+	45154758	45200008	789624	16	64,87,185,214,158,156,1906,95,69,129,157,107,561,376,292,1021,	0,614,4337,12191,15830,18296,20312,26671,26878,29015,30458,33022,34043,41413,43885,45111,
#Partially deleted in new
chr14	45175957	45200071	chr14:45175957-45200071	0	+	45175957	45200008	789624	11	1019,95,69,129,157,107,561,105,376,292,202,	0,5472,5679,7816,9259,11823,12844,19523,20214,22686,23912,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	45180834	45187848	chr14:45180834-45187848	0	+	45180834	45180834	8553170	6	55,95,69,129,157,68,	0,595,802,2939,4382,6946,
#Partially deleted in new
chr14	45196171	45199927	chr14:45196171-45199927	0	+	45196171	45198763	789624	3	376,204,58,	0,2560,3698,
#Partially deleted in new
chr14	45196453	45200031	chr14:45196453-45200031	0	+	45196453	45199904	789624	3	94,192,162,	0,2190,3416,
#Partially deleted in new
chr14	45198434	45199971	chr14:45198434-45199971	0	+	45198434	45198434	8553170	2	501,102,	0,1435,
#Partially deleted in new
chr14	45203189	45253402	chr14:45203189-45253402	3	-	45204108	45247286	0	17	1023,55,88,149,161,173,829,94,152,158,88,131,74,485,114,635,368,	0,1209,2893,7190,13829,15092,20728,23553,24473,27951,29543,32624,34458,38844,39571,43553,49845,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	45203836	45206444	chr14:45203836-45206444	0	-	45203836	45203836	8553170	3	376,55,362,	0,562,2246,
#Deleted in new
chr14	45204379	45206274	chr14:45204379-45206274	0	-	45204379	45204379	8553170	2	74,192,	0,1703,
#Partially deleted in new
chr14	45210110	45224045	chr14:45210110-45224045	0	-	45210110	45210110	8553170	4	418,161,173,128,	0,6908,8171,13807,
#Partially deleted in new
chr14	45210462	45224124	chr14:45210462-45224124	0	-	45218404	45224124	789624	4	66,161,151,207,	0,6556,7819,13455,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	45226825	45253198	chr14:45226825-45253198	0	-	45232572	45247286	789624	11	11,152,158,119,88,131,74,485,114,635,164,	0,837,4315,5683,5907,8988,10822,15208,15935,19917,26209,
#Partially deleted in new
chr14	45227686	45231441	chr14:45227686-45231441	0	-	45227686	45227686	8553170	2	128,301,	0,3454,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	45227802	45242480	chr14:45227802-45242480	0	-	45232753	45242480	789624	6	12,158,119,88,74,447,	0,3338,4706,4930,9845,14231,
#Partially deleted in new
chr14	45237696	45253540	chr14:45237696-45253540	0	-	45237696	45237696	8553170	2	25,506,	0,15338,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	45241467	45242386	chr14:45241467-45242386	0	-	45241467	45241467	8553170	2	403,353,	0,566,
#Partially deleted in new
chr14	45246820	45253177	chr14:45246820-45253177	0	-	45246820	45247286	789624	3	557,108,143,	0,3210,6214,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	45274358	45274477	chr14:45274358-45274477	3	-	45274358	45274358	8553170	1	119,	0,
#Deleted in new
chr14	45290035	45290386	chr14:45290035-45290386	7	+	45290035	45290035	16724991	1	351,	0,
#Deleted in new
chr14	45369214	45370839	chr14:45369214-45370839	3	+	45369214	45369214	8553170	1	1625,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	45377267	45389286	chr14:45377267-45389286	3	+	45377267	45377267	8553170	2	178,370,	0,11649,
#Deleted in new
chr14	45502741	45503140	chr14:45502741-45503140	7	-	45502741	45502741	16724991	1	399,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	45567994	45569069	chr14:45567994-45569069	3	+	45567994	45567994	8553170	2	101,544,	0,531,
#Partially deleted in new
chr14	45706257	45715691	chr14:45706257-45715691	0	-	45706257	45706257	8553170	2	245,342,	0,9092,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	45706271	45715952	chr14:45706271-45715952	3	-	45706271	45706271	8553170	3	231,55,603,	0,5627,9078,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	45940942	46447375	chr14:45940942-46447375	3	+	45940942	45940942	8553170	6	76,116,58,49,42,67,	0,269881,270804,377870,505242,506366,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	46064158	46501823	chr14:46064158-46501823	1	+	46064158	46064158	789624	6	58,116,58,70,47,517,	0,146665,147588,374022,385749,437148,
#Partially deleted in new
chr14	46471358	46501611	chr14:46471358-46501611	1	+	46471358	46471358	789624	3	153,96,305,	0,18833,29948,
#Partially deleted in new
chr14	46471360	46501611	chr14:46471360-46501611	0	+	46471360	46471360	789624	2	151,305,	0,29946,
#Partially deleted in new
chr14	46651009	46651821	chr14:46651009-46651821	3	-	46651091	46651736	0	1	812,	0,
#Partially deleted in new
chr14	46840091	47674954	chr14:46840091-47674954	1	-	46841930	47674796	789624	17	1928,106,131,159,156,21,178,149,270,294,330,270,133,197,175,140,438,	0,5674,14932,33341,33953,37397,41952,79920,117282,194919,221157,256762,291622,303986,377929,461319,834425,
#Partially deleted in new
chr14	46841784	47343118	chr14:46841784-47343118	1	-	46841930	47131744	789624	17	235,106,131,159,156,21,178,149,270,294,330,270,133,197,175,140,21,	0,3981,13239,31648,32260,35704,40259,78227,115589,193226,219464,255069,289929,302293,376236,459626,501313,
#Partially deleted in new
chr14	46841930	47674589	chr14:46841930-47674589	3	-	46841930	47674589	789624	17	89,106,131,159,156,21,178,149,270,294,330,270,133,197,175,140,73,	0,3835,13093,31502,32114,35558,40113,78081,115443,193080,219318,254923,289783,302147,376090,459480,832586,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	46870937	47626525	chr14:46870937-47626525	0	-	47035207	47131744	789624	14	1023,159,156,178,149,270,268,330,270,133,197,175,140,187,	0,2495,3107,11106,49074,86436,164073,190311,225916,260776,273140,347083,430473,755401,
#Partially deleted in new
chr14	46873333	46882222	chr14:46873333-46882222	0	-	46873333	46873333	8553170	3	258,156,179,	0,711,8710,
#Partially deleted in new
chr14	46873918	46920174	chr14:46873918-46920174	0	-	46873918	46873918	8553170	4	282,21,178,163,	0,3570,8125,46093,
#Deleted in new
chr14	46960422	46960546	chr14:46960422-46960546	3	+	46960422	46960422	8553170	1	124,	0,
#Deleted in new
chr14	46996453	46997174	chr14:46996453-46997174	7	+	46996453	46996453	16724991	1	721,	0,
#Partially deleted in new
chr14	47035188	47131838	chr14:47035188-47131838	0	-	47035188	47131838	789624	4	116,330,186,125,	0,26060,61665,96525,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	47058599	47343192	chr14:47058599-47343192	0	-	47059258	47131744	789624	9	397,186,330,270,133,197,170,140,95,	0,595,2649,38254,73114,85478,159421,242811,284498,
#Deleted in new
chr14	47200574	47201104	chr14:47200574-47201104	7	-	47200574	47200574	16724991	1	530,	0,
#Partially deleted in new
chr14	47218054	47343234	chr14:47218054-47343234	0	-	47218054	47343086	789624	3	141,140,293,	0,83356,124887,
#Partially deleted in new
chr14	47299346	47343116	chr14:47299346-47343116	0	-	47299346	47299346	8553170	5	193,140,93,66,19,	0,2064,5884,6730,43751,
#Deleted in new
chr14	47444105	47444494	chr14:47444105-47444494	7	-	47444105	47444105	16724991	1	389,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	47760994	47761104	chr14:47760994-47761104	3	-	47760994	47760994	5263520	1	110,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	47764953	47795014	chr14:47764953-47795014	3	-	47764953	47764953	789624	3	2804,38,43,	0,24952,30018,
#Partially deleted in new
chr14	47766685	47789943	chr14:47766685-47789943	0	-	47766685	47766685	8553170	2	242,38,	0,23220,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	47767599	47789943	chr14:47767599-47789943	0	-	47767599	47767599	8553170	3	158,80,38,	0,1231,22306,
#Deleted in new
chr14	47801925	47802201	chr14:47801925-47802201	7	-	47801925	47801925	16724991	1	276,	0,
#Deleted in new
chr14	48045480	48046216	chr14:48045480-48046216	7	+	48045480	48045480	16724991	2	154,460,	0,276,
#Partially deleted in new
chr14	48319067	48319394	chr14:48319067-48319394	7	-	48319067	48319067	16724991	1	327,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	48341225	48341332	chr14:48341225-48341332	3	-	48341225	48341225	8553170	1	107,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	48396507	48491767	chr14:48396507-48491767	3	-	48396507	48396507	8553170	6	43,78,61,58,124,123,	0,3972,30956,32678,35420,95137,
#Partially deleted in new
chr14	48398309	48399375	chr14:48398309-48399375	7	+	48398309	48398309	16724991	1	1066,	0,
#Deleted in new
chr14	48489882	48490434	chr14:48489882-48490434	7	+	48489882	48489882	16724991	1	552,	0,
#Deleted in new
chr14	48819359	48819593	chr14:48819359-48819593	7	+	48819359	48819359	16724991	1	234,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	49057712	49077505	chr14:49057712-49077505	3	-	49057712	49057712	8553170	4	238,124,110,50,	0,12079,13160,19743,
#Deleted in new
chr14	49373965	49374383	chr14:49373965-49374383	7	+	49373965	49373965	16724991	1	418,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	49552632	49552748	chr14:49552632-49552748	7	+	49552632	49552632	16724991	1	116,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	49570983	49586376	chr14:49570983-49586376	1	-	49577811	49586346	0	3	6870,100,92,	0,14966,15301,
#Deleted in new
chr14	49577391	49577794	chr14:49577391-49577794	7	-	49577391	49577391	16724991	1	403,	0,
#Partially deleted in new
chr14	49583571	49586376	chr14:49583571-49586376	1	-	49583666	49586346	0	3	104,100,92,	0,2378,2713,
#Partially deleted in new
chr14	49583576	49598683	chr14:49583576-49598683	3	-	49583666	49586346	0	4	99,100,194,284,	0,2373,2708,14823,
#Partially deleted in new
chr14	49583578	49598690	chr14:49583578-49598690	1	-	49583666	49598452	789624	3	97,100,291,	0,2371,14821,
#Partially deleted in new
chr14	49583578	49586351	chr14:49583578-49586351	0	-	49583578	49583578	8553170	2	97,402,	0,2371,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	49585297	49586376	chr14:49585297-49586376	1	-	49585847	49586346	789624	2	752,92,	0,987,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	49585389	49586325	chr14:49585389-49586325	0	-	49585575	49586325	789624	3	192,100,41,	0,560,895,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	49586578	49586878	chr14:49586578-49586878	3	+	49586578	49586578	8553170	1	300,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	49592235	49592337	chr14:49592235-49592337	3	-	49592235	49592235	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	49597474	49599164	chr14:49597474-49599164	0	-	49597474	49597474	8553170	1	1690,	0,
#Partially deleted in new
chr14	49598696	49614672	chr14:49598696-49614672	3	+	49599020	49614496	789624	4	507,99,722,417,	0,3673,8703,15559,
#Partially deleted in new
chr14	49598760	49614670	chr14:49598760-49614670	1	+	49599020	49614414	789624	3	443,99,415,	0,3609,15495,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	49598774	49614671	chr14:49598774-49614671	0	+	49599020	49607452	789624	6	429,99,67,722,153,416,	0,3595,4777,8625,13697,15481,
#Partially deleted in new
chr14	49598951	49614671	chr14:49598951-49614671	0	+	49599020	49601553	789624	5	252,108,99,722,416,	0,2590,3418,8448,15304,
#Deleted in new
chr14	49599993	49600572	chr14:49599993-49600572	7	+	49599993	49599993	16724991	1	579,	0,
#Partially deleted in new
chr14	49600411	49607509	chr14:49600411-49607509	0	+	49600411	49600411	8553170	2	286,110,	0,6988,
#Deleted in new
chr14	49601010	49601124	chr14:49601010-49601124	7	-	49601010	49601010	16724991	1	114,	0,
#Partially deleted in new
chr14	49618518	49620685	chr14:49618518-49620685	3	-	49618783	49619104	789624	2	622,124,	0,2043,
#Deleted in new
chr14	49620794	49623481	chr14:49620794-49623481	3	+	49621268	49622612	0	1	2687,	0,
#Deleted in new
chr14	49620814	49623480	chr14:49620814-49623480	3	-	49620814	49620814	8553170	2	234,2235,	0,431,
#Partially deleted in new
chr14	49625173	49635230	chr14:49625173-49635230	3	-	49625541	49635149	789624	3	875,144,1944,	0,2838,8113,
#Partially deleted in new
chr14	49625173	49635230	chr14:49625173-49635230	1	-	49625541	49635149	789624	2	875,1944,	0,8113,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	49629290	49629890	chr14:49629290-49629890	3	-	49629290	49629290	8553170	2	265,136,	0,464,
#Partially deleted in new
chr14	49643554	49651484	chr14:49643554-49651484	0	-	49643554	49643554	8553170	3	116,177,216,	0,6710,7714,
#Partially deleted in new
chr14	49643554	49655064	chr14:49643554-49655064	0	-	49643554	49643554	8553170	7	116,68,177,109,78,60,60,	0,3738,6710,7714,10435,10600,11450,
#Partially deleted in new
chr14	49643559	49688303	chr14:49643559-49688303	3	-	49643651	49688203	0	19	111,68,177,109,78,60,55,90,173,73,49,57,84,75,94,78,76,101,168,	0,3733,6705,7709,10430,10595,11224,11445,12111,19755,21066,21547,22770,25964,30563,30790,36165,40033,44576,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	49643563	49647360	chr14:49643563-49647360	0	-	49643563	49643563	8553170	3	107,125,68,	0,3006,3729,
#Partially deleted in new
chr14	49643563	49647360	chr14:49643563-49647360	0	-	49643563	49643563	8553170	3	107,99,68,	0,3430,3729,
#Partially deleted in new
chr14	49643584	49688422	chr14:49643584-49688422	1	-	49643651	49688203	0	18	86,68,177,109,78,60,55,90,173,73,49,57,84,75,94,76,101,287,	0,3708,6680,7684,10405,10570,11199,11420,12086,19730,21041,21522,22745,25939,30538,36140,40008,44551,
#Partially deleted in new
chr14	49643585	49688197	chr14:49643585-49688197	0	-	49643585	49643585	8553170	18	85,68,177,109,78,60,55,90,173,73,38,70,84,75,94,76,101,62,	0,3707,6679,7683,10404,10569,11198,11419,12085,19729,21040,21508,22744,25938,30537,36139,40007,44550,
#Partially deleted in new
chr14	49650118	49654320	chr14:49650118-49654320	0	-	49650118	49650118	8553170	4	323,109,78,166,	0,1150,3871,4036,
#Partially deleted in new
chr14	49650187	49688210	chr14:49650187-49688210	1	-	49650252	49688203	0	17	254,109,78,60,55,90,173,73,49,57,84,75,94,78,76,101,75,	0,1081,3802,3967,4596,4817,5483,13127,14438,14919,16142,19336,23935,24162,29537,33405,37948,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	49653924	49654463	chr14:49653924-49654463	0	-	49653924	49653924	8553170	2	143,309,	0,230,
#Deleted in new
chr14	49677368	49677893	chr14:49677368-49677893	7	+	49677368	49677368	16724991	1	525,	0,
#Partially deleted in new
chr14	49679473	49688203	chr14:49679473-49688203	1	-	49679678	49688203	789624	3	327,101,68,	0,4119,8662,
#Partially deleted in new
chr14	49681301	49681886	chr14:49681301-49681886	7	+	49681301	49681301	16724991	2	136,37,	0,548,
#Deleted in new
chr14	49684543	49684665	chr14:49684543-49684665	3	+	49684543	49684543	8553170	1	122,	0,
#Partially deleted in new
chr14	49693104	49753152	chr14:49693104-49753152	3	+	49693194	49751772	789624	13	186,71,118,119,79,84,84,59,113,73,85,53,1567,	0,16054,16604,17158,30769,32581,35821,36385,39599,41484,46993,50648,58481,
#Partially deleted in new
chr14	49693104	49751847	chr14:49693104-49751847	0	+	49693194	49710294	789624	13	186,71,118,93,79,84,84,59,113,73,85,53,262,	0,16054,16604,17184,30769,32581,35821,36385,39599,41484,46993,50648,58481,
#Partially deleted in new
chr14	49693119	49729007	chr14:49693119-49729007	0	+	49693194	49729007	789624	6	171,71,118,119,84,82,	0,16039,16589,17143,32566,35806,
#Partially deleted in new
chr14	49693128	49740177	chr14:49693128-49740177	0	+	49693194	49740177	789624	7	162,84,84,59,113,73,80,	0,32557,35797,36361,39575,41460,46969,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	49707666	49708792	chr14:49707666-49708792	3	-	49707666	49707666	8553170	2	98,470,	0,656,
#Partially deleted in new
chr14	49725607	49751106	chr14:49725607-49751106	0	+	49725607	49725607	8553170	8	162,84,59,113,73,85,53,97,	0,3318,3882,7096,8981,14490,18145,25402,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr14	49767607	49786385	chr14:49767607-49786385	3	+	49768468	49782953	789624	13	1014,80,118,116,82,84,81,59,110,73,88,53,3556,	0,3986,6953,10231,10570,10803,11987,12140,12605,13095,14762,14934,15222,
#Partially deleted in new
chr14	49768129	49783105	chr14:49768129-49783105	0	+	49768468	49779711	789624	11	492,80,118,116,82,84,212,110,73,53,276,	0,3464,6431,9709,10048,10281,11465,12083,12573,14412,14700,
#Partially deleted in new
chr14	49768153	49783111	chr14:49768153-49783111	1	+	49768468	49782859	789624	12	468,80,118,116,82,84,81,59,110,73,88,282,	0,3440,6407,9685,10024,10257,11441,11594,12059,12549,14216,14676,
#Partially deleted in new
chr14	49768167	49783115	chr14:49768167-49783115	0	+	49768468	49779711	789624	12	454,80,118,116,82,84,212,110,73,88,53,286,	0,3426,6393,9671,10010,10243,11427,12045,12535,14202,14374,14662,
#Partially deleted in new
chr14	49768167	49783122	chr14:49768167-49783122	1	+	49768468	49782410	789624	11	454,80,118,116,82,84,81,59,110,88,293,	0,3426,6393,9671,10010,10243,11427,11580,12045,14202,14662,
#Partially deleted in new
chr14	49768800	49778259	chr14:49768800-49778259	0	+	49768800	49768800	8553170	5	291,80,118,116,82,	0,2793,5760,9038,9377,
#Partially deleted in new
chr14	49771591	49774895	chr14:49771591-49774895	0	+	49771591	49771591	8553170	2	82,335,	0,2969,
#Partially deleted in new
chr14	49777802	49780103	chr14:49777802-49780103	0	+	49777802	49777802	8553170	4	152,82,84,509,	0,375,608,1792,
#Partially deleted in new
chr14	49777852	49782457	chr14:49777852-49782457	0	+	49777852	49777852	8553170	7	102,82,84,212,110,73,88,	0,325,558,1742,2360,2850,4517,
#Partially deleted in new
chr14	49780214	49782709	chr14:49780214-49782709	0	+	49780214	49780214	8553170	4	108,73,88,168,	0,488,2155,2327,
#Partially deleted in new
chr14	49780405	49782918	chr14:49780405-49782918	0	+	49780405	49780405	8553170	4	370,88,53,89,	0,1964,2136,2424,
#Partially deleted in new
chr14	49782082	49853203	chr14:49782082-49853203	3	-	49784635	49852753	0	33	2631,80,44,101,33,198,78,154,50,43,277,121,59,58,113,63,104,89,64,192,209,78,63,76,71,74,87,68,149,126,103,69,509,	0,2842,3009,3137,4635,7063,7413,13708,17392,17553,18337,20370,20586,21154,23938,31905,32671,43784,46208,46533,46971,47266,49216,49968,50124,51340,52280,56056,58635,64057,69480,69724,70612,
#Partially deleted in new
chr14	49783813	49800800	chr14:49783813-49800800	0	-	49783813	49783813	8553170	11	900,80,44,101,33,198,78,154,50,43,381,	0,1111,1278,1406,2904,5332,5682,11977,15661,15822,16606,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	49783814	49801519	chr14:49783814-49801519	0	-	49783814	49783814	8553170	10	899,396,33,198,78,154,96,50,43,1100,	0,1110,2903,5331,5681,11976,12418,15660,15821,16605,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr14	49783827	49832253	chr14:49783827-49832253	0	-	49783827	49783827	8553170	26	886,396,33,198,78,154,96,93,50,43,277,121,59,58,113,63,54,129,89,64,172,209,78,63,76,47,	0,1097,2890,5318,5668,11963,12405,13545,15647,15808,16592,18625,18841,19409,22193,30160,30926,34465,42039,44463,44788,45226,45521,47471,48223,48379,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	49784655	49785774	chr14:49784655-49785774	0	-	49784655	49784655	8553170	4	58,80,44,555,	0,269,436,564,
#Partially deleted in new
chr14	49784904	49787174	chr14:49784904-49787174	0	-	49784904	49784904	8553170	2	416,457,	0,1813,
#Partially deleted in new
chr14	49784955	49852786	chr14:49784955-49852786	0	-	49784955	49852753	789624	31	49,44,101,33,198,78,154,50,43,277,121,59,58,113,63,104,89,64,192,209,78,63,76,71,74,87,68,149,103,69,92,	0,136,264,1762,4190,4540,10835,14519,14680,15464,17497,17713,18281,21065,29032,29798,40911,43335,43660,44098,44393,46343,47095,47251,48467,49407,53183,55762,66607,66851,67739,
#Partially deleted in new
chr14	49789495	49796314	chr14:49789495-49796314	0	-	49789495	49789495	8553170	2	78,524,	0,6295,
#Partially deleted in new
chr14	49800650	49825938	chr14:49800650-49825938	0	-	49800650	49800650	8553170	7	46,121,59,58,113,104,72,	0,1802,2018,2586,5370,14103,25216,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr14	49820095	49852780	chr14:49820095-49852780	0	-	49820095	49820095	8553170	15	361,89,64,192,209,78,63,76,71,87,68,126,103,69,86,	0,5771,8195,8520,8958,9253,11203,11955,12111,14267,18043,26044,31467,31711,32599,
#Partially deleted in new
chr14	49828291	49829350	chr14:49828291-49829350	0	-	49828291	49828291	8553170	3	63,192,297,	0,324,762,
#Partially deleted in new
chr14	49828612	49829264	chr14:49828612-49829264	0	-	49828612	49828612	8553170	2	175,211,	0,441,
#Partially deleted in new
chr14	49834362	49852788	chr14:49834362-49852788	0	-	49834362	49852753	789624	6	87,68,149,103,69,94,	0,3776,6355,17200,17444,18332,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	49839400	49839493	chr14:49839400-49839493	3	-	49839400	49839400	8553170	1	93,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	49839724	49839827	chr14:49839724-49839827	3	+	49839724	49839724	8553170	1	103,	0,
#Partially deleted in new
chr14	49845974	49852821	chr14:49845974-49852821	1	-	49846130	49852753	789624	4	291,103,69,127,	0,5588,5832,6720,
#Partially deleted in new
chr14	49846138	49852808	chr14:49846138-49852808	0	-	49846138	49846138	8553170	5	127,79,103,69,114,	0,3490,5424,5668,6556,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	49853615	49853914	chr14:49853615-49853914	3	-	49853615	49853615	789624	1	299,	0,
#Partially deleted in new
chr14	49861175	49864326	chr14:49861175-49864326	3	-	49861175	49861175	8553170	4	69,340,183,498,	0,381,958,2653,
#Partially deleted in new
chr14	49861602	49864288	chr14:49861602-49864288	1	-	49861602	49861602	8553170	3	714,92,117,	0,2226,2569,
#Deleted in new
chr14	49863071	49864379	chr14:49863071-49864379	3	+	49863071	49863071	8553170	1	1308,	0,
#Deleted in new
chr14	49893091	49897054	chr14:49893091-49897054	3	+	49893736	49894264	0	2	66,3799,	0,164,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	49901849	49901950	chr14:49901849-49901950	3	-	49901849	49901849	8553170	1	101,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	49913492	49913760	chr14:49913492-49913760	3	-	49913492	49913492	8553170	1	268,	0,
#Partially deleted in new
chr14	49927570	49961960	chr14:49927570-49961960	1	-	49927570	49927570	8553170	5	248,141,164,81,258,	0,16181,18583,32968,34132,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	49941935	49961960	chr14:49941935-49961960	0	-	49941935	49941935	8553170	4	1957,164,81,258,	0,4218,18603,19767,
#Partially deleted in new
chr14	49946153	49960662	chr14:49946153-49960662	0	-	49946153	49946153	8553170	2	561,124,	0,14385,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	49960543	50089203	chr14:49960543-50089203	3	-	49960543	49960543	8553170	12	76,236,132,70,96,102,225,243,78,123,131,83,	0,2277,21629,31712,32234,44820,50390,78471,78848,86923,92230,128577,
#Partially deleted in new
chr14	49966398	49966511	chr14:49966398-49966511	3	+	49966398	49966398	5263520	1	113,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	49981711	50007520	chr14:49981711-50007520	0	-	49981711	49981711	789624	4	593,70,96,1927,	0,10544,11066,23882,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	49982183	50007520	chr14:49982183-50007520	1	-	49982183	49982183	8553170	4	121,70,96,2157,	0,10072,10594,23180,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	49990989	49993134	chr14:49990989-49993134	0	-	49990989	49990989	789624	4	1018,70,96,132,	0,1266,1788,2013,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	49991379	50007520	chr14:49991379-50007520	1	-	49991379	49991379	8553170	4	946,96,239,1927,	0,1398,11369,14214,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	49991554	50006519	chr14:49991554-50006519	1	-	49991554	49991554	789624	5	210,70,96,132,3771,	0,701,1223,8372,11194,
#Partially deleted in new
chr14	50007312	50039226	chr14:50007312-50039226	1	-	50007312	50007312	8553170	4	107,80,93,212,	0,3293,3621,31702,
#Partially deleted in new
chr14	50007317	50039088	chr14:50007317-50039088	0	-	50007317	50007317	8553170	3	102,93,74,	0,3616,31697,
#Partially deleted in new
chr14	50007333	50011389	chr14:50007333-50011389	0	-	50007333	50007333	8553170	3	86,225,46,	0,3600,4010,
#Partially deleted in new
chr14	50010961	50039884	chr14:50010961-50039884	0	-	50010961	50010961	8553170	4	65,243,78,204,	0,28053,28430,28719,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	50037594	50041229	chr14:50037594-50041229	1	-	50037594	50037594	8553170	3	1663,78,560,	0,1797,3075,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	50039144	50089195	chr14:50039144-50089195	0	-	50039144	50039144	8553170	5	113,78,123,131,75,	0,247,8322,13629,49976,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	50041642	50089175	chr14:50041642-50089175	1	-	50041642	50041642	8553170	5	53,172,123,131,55,	0,632,5824,11131,47478,
#Deleted in new
chr14	50050367	50051336	chr14:50050367-50051336	7	+	50050367	50050367	16724991	1	969,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	50052856	50053569	chr14:50052856-50053569	7	+	50052856	50052856	16724991	1	713,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	50068567	50068873	chr14:50068567-50068873	3	+	50068567	50068567	8553170	1	306,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	50083650	50092643	chr14:50083650-50092643	1	-	50083650	50083650	8553170	5	359,169,75,298,74,	0,1479,5470,7827,8919,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	50086981	50087083	chr14:50086981-50087083	3	+	50086981	50086981	8553170	1	102,	0,
#Partially deleted in new
chr14	50108631	50116477	chr14:50108631-50116477	0	-	50108631	50108631	8553170	5	1082,143,120,73,409,	0,4738,5653,7207,7437,
#Partially deleted in new
chr14	50108632	50116557	chr14:50108632-50116557	3	-	50109698	50116552	0	6	1081,105,120,73,111,271,	0,3982,5652,7206,7436,7654,
#Partially deleted in new
chr14	50108632	50116600	chr14:50108632-50116600	0	-	50115842	50116552	0	6	1081,105,120,73,100,314,	0,3982,5652,7206,7447,7654,
#Partially deleted in new
chr14	50108641	50116558	chr14:50108641-50116558	0	-	50108641	50108641	789624	5	1072,105,120,73,479,	0,3973,5643,7197,7438,
#Partially deleted in new
chr14	50109536	50116600	chr14:50109536-50116600	1	-	50109698	50116552	0	5	177,120,73,111,314,	0,4748,6302,6532,6750,
#Partially deleted in new
chr14	50117119	50231558	chr14:50117119-50231558	3	-	50118343	50231283	789624	23	1734,110,42,262,117,173,118,163,120,223,104,123,82,656,128,99,111,144,204,165,132,126,362,	0,3155,12841,13381,17003,21492,22822,28050,28357,32888,35950,39879,41445,42311,44362,57334,63452,65343,71377,82571,83833,87164,114077,
#Partially deleted in new
chr14	50118309	50231309	chr14:50118309-50231309	1	-	50118343	50231283	789624	22	544,110,42,262,117,173,118,163,120,223,104,123,82,656,128,111,144,204,165,132,126,113,	0,1965,11651,12191,15813,20302,21632,26860,27167,31698,34760,38689,40255,41121,43172,62262,64153,70187,81381,82643,85974,112887,
#Partially deleted in new
chr14	50155891	50180654	chr14:50155891-50180654	0	-	50156910	50180654	789624	6	1230,82,656,128,99,83,	0,2673,3539,5590,18562,24680,
#Partially deleted in new
chr14	50182454	50231254	chr14:50182454-50231254	0	-	50182454	50182454	8553170	5	152,165,132,126,58,	0,17236,18498,21829,48742,
#Partially deleted in new
chr14	50199700	50231101	chr14:50199700-50231101	0	-	50199700	50199700	8553170	4	155,132,126,266,	0,1252,4583,31135,
#Partially deleted in new
chr14	50201037	50231362	chr14:50201037-50231362	0	-	50204342	50231283	789624	4	47,126,59,166,	0,3246,14336,30159,
#Partially deleted in new
chr14	50237562	50312168	chr14:50237562-50312168	3	-	50237595	50312150	789624	10	163,132,158,168,35,163,132,152,116,158,	0,27795,30190,31600,40957,46308,56552,64454,65339,74448,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	50242433	50312548	chr14:50242433-50312548	1	-	50247057	50312150	789624	10	4820,132,158,168,35,163,132,152,116,538,	0,22924,25319,26729,36086,41437,51681,59583,60468,69577,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	50245650	50312229	chr14:50245650-50312229	1	-	50247057	50312150	789624	11	470,213,132,158,168,35,163,132,152,116,219,	0,1390,19707,22102,23512,32869,38220,48464,56366,57251,66360,
#Partially deleted in new
chr14	50282442	50312226	chr14:50282442-50312226	1	-	50282496	50312150	789624	6	62,163,132,152,116,216,	0,1428,11672,19574,20459,29568,
#Partially deleted in new
chr14	50283852	50312154	chr14:50283852-50312154	1	-	50284016	50312150	789624	6	181,79,132,152,116,144,	0,9352,10262,18164,19049,28158,
#Partially deleted in new
chr14	50294197	50312226	chr14:50294197-50312226	0	-	50311372	50312150	789624	5	49,152,116,64,216,	0,7819,8704,17172,17813,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	50299854	50299946	chr14:50299854-50299946	3	-	50299854	50299854	5263520	1	92,	0,
#Partially deleted in new
chr14	50302016	50312147	chr14:50302016-50312147	0	-	50302016	50302016	8553170	4	152,116,143,137,	0,885,9274,9994,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	50312325	50327059	chr14:50312325-50327059	0	+	50312325	50312325	8553170	5	64,112,209,172,1451,	0,9157,10185,11619,13283,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	50312328	50326226	chr14:50312328-50326226	1	+	50313020	50325631	789624	4	732,112,209,618,	0,9154,10182,13280,
#Partially deleted in new
chr14	50312329	50325728	chr14:50312329-50325728	0	+	50312329	50312329	8553170	4	60,112,209,120,	0,9153,10181,13279,
#Partially deleted in new
chr14	50312334	50324706	chr14:50312334-50324706	0	+	50312334	50312334	8553170	5	55,112,209,172,160,	0,9148,10176,11610,12212,
#Partially deleted in new
chr14	50312383	50322892	chr14:50312383-50322892	1	+	50313020	50322769	789624	3	677,112,382,	0,9099,10127,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	50312559	50326226	chr14:50312559-50326226	0	+	50313020	50314595	789624	5	501,36,112,209,618,	0,2031,8923,9951,13049,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	50312640	50334907	chr14:50312640-50334907	3	+	50313020	50325723	789624	5	420,112,209,172,9299,	0,8842,9870,11304,12968,
#Partially deleted in new
chr14	50319233	50335558	chr14:50319233-50335558	1	+	50319233	50335558	789624	6	68,209,172,37,215,100,	0,3277,4711,6375,12788,16225,
#Partially deleted in new
chr14	50321318	50325677	chr14:50321318-50325677	0	+	50321487	50325677	789624	5	58,112,209,172,69,	0,164,1192,2626,4290,
#Partially deleted in new
chr14	50321532	50324116	chr14:50321532-50324116	0	+	50321532	50321532	8553170	3	62,296,172,	0,978,2412,
#Partially deleted in new
chr14	50322541	50324291	chr14:50322541-50324291	0	+	50322541	50322541	8553170	2	178,347,	0,1403,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	50326525	50327909	chr14:50326525-50327909	3	-	50326525	50326525	8553170	2	248,198,	0,1186,
#Partially deleted in new
chr14	50329403	50395899	chr14:50329403-50395899	3	-	50330073	50395871	789624	9	778,171,57,83,201,91,73,122,199,	0,2858,5161,9543,11628,12728,15582,29624,66297,
#Partially deleted in new
chr14	50330111	50339029	chr14:50330111-50339029	0	-	50330111	50339029	789624	3	70,57,83,	0,4453,8835,
#Partially deleted in new
chr14	50331925	50341129	chr14:50331925-50341129	0	-	50332249	50341129	789624	4	507,57,83,98,	0,2639,7021,9106,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	50331926	50397404	chr14:50331926-50397404	1	-	50332659	50395871	789624	9	766,57,83,201,91,73,122,629,187,	0,2638,7020,9105,10205,13059,27101,63774,65291,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	50338945	50342490	chr14:50338945-50342490	0	-	50338945	50338945	8553170	4	84,201,91,111,	0,2086,3186,3434,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	50341037	50342609	chr14:50341037-50342609	0	-	50341037	50341037	8553170	2	195,478,	0,1094,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	50341171	50363976	chr14:50341171-50363976	0	-	50341171	50341171	8553170	6	61,91,73,122,94,132,	0,960,3814,17856,22049,22673,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	50357059	50396076	chr14:50357059-50396076	0	-	50357059	50357059	8553170	3	206,122,376,	0,1968,38641,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	50396157	50396881	chr14:50396157-50396881	0	-	50396157	50396157	8553170	2	172,139,	0,585,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	50396200	50396886	chr14:50396200-50396886	0	-	50396200	50396200	8553170	2	129,63,	0,623,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	50397012	50398345	chr14:50397012-50398345	3	+	50397012	50397012	8553170	3	341,127,33,	0,862,1300,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr14	50418500	50450600	chr14:50418500-50450600	0	-	50418500	50418500	8553170	18	1606,56,71,93,69,178,104,59,118,61,80,85,42,98,154,43,68,1827,	0,4620,7406,10161,10691,15893,16461,18975,19393,21512,21861,24231,25228,25438,26540,27578,28913,30273,
#Partially deleted in new
chr14	50418524	50532609	chr14:50418524-50532609	3	-	50420018	50532049	789624	32	1582,56,71,93,69,178,104,59,118,61,80,85,42,98,154,43,68,59,79,117,82,63,132,73,43,48,56,65,91,58,217,210,	0,4596,7382,10137,10667,15869,16437,18951,19369,21488,21837,24207,25204,25414,26516,27554,28889,30249,37991,44140,45527,48058,50126,56552,57603,57734,63836,67053,67579,86275,113417,113875,
#Partially deleted in new
chr14	50434963	50438401	chr14:50434963-50438401	0	-	50434963	50434963	8553170	4	102,59,115,310,	0,2512,2930,3128,
#Partially deleted in new
chr14	50448806	50456742	chr14:50448806-50456742	3	+	50448806	50448806	8553170	2	44,458,	0,7478,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	50462692	50483149	chr14:50462692-50483149	0	-	50462692	50462692	8553170	9	89,82,63,132,73,43,48,56,498,	0,1359,3890,5958,12384,13435,13566,19668,19959,
#Partially deleted in new
chr14	50464077	50532087	chr14:50464077-50532087	0	-	50476283	50532049	789624	8	56,63,132,73,43,48,58,146,	0,2505,4573,10999,12050,12181,40722,67864,
#Partially deleted in new
chr14	50468689	50486145	chr14:50468689-50486145	0	-	50468689	50468689	8553170	5	93,73,56,65,42,	0,6387,13671,16888,17414,
#Deleted in new
chr14	50471768	50472592	chr14:50471768-50472592	7	+	50471768	50471768	16724991	1	824,	0,
#Partially deleted in new
chr14	50475091	50561126	chr14:50475091-50561126	0	-	50475091	50486159	789624	9	58,43,48,56,65,91,58,86,87,	0,1036,1167,7269,10486,11012,29708,67407,85948,
#Partially deleted in new
chr14	50476273	50532472	chr14:50476273-50532472	0	-	50476273	50532049	789624	7	33,56,65,91,58,217,25,	0,6087,9304,9830,28526,55668,56174,
#Partially deleted in new
chr14	50485928	50505128	chr14:50485928-50505128	0	-	50485928	50485928	8553170	2	266,329,	0,18871,
#Partially deleted in new
chr14	50504798	50532655	chr14:50504798-50532655	0	-	50504798	50532049	789624	3	59,217,208,	0,27143,27649,
#Partially deleted in new
chr14	50532508	50587936	chr14:50532508-50587936	0	+	50532508	50532508	8553170	3	365,173,106,	0,27618,55322,
#Partially deleted in new
chr14	50533025	50633049	chr14:50533025-50633049	1	+	50560265	50632339	0	14	342,173,248,135,105,51,57,93,139,128,57,72,432,821,	0,27101,54805,57915,58509,60820,62550,80233,81347,87573,88817,90151,95005,99203,
#Partially deleted in new
chr14	50559086	50590957	chr14:50559086-50590957	0	+	50560265	50590957	789624	4	182,173,248,17,	0,1040,28744,31854,
#Partially deleted in new
chr14	50559551	50587885	chr14:50559551-50587885	0	+	50560265	50587885	789624	3	299,173,55,	0,575,28279,
#Partially deleted in new
chr14	50560024	50633068	chr14:50560024-50633068	3	+	50560265	50632339	0	14	275,248,135,105,51,57,93,139,128,57,72,432,15,840,	0,27806,30916,31510,33821,35551,53234,54348,60574,61818,63152,68006,69970,72204,
#Partially deleted in new
chr14	50560130	50613286	chr14:50560130-50613286	0	+	50591549	50613286	789624	6	169,135,105,51,57,28,	0,30810,31404,33715,35445,53128,
#Partially deleted in new
chr14	50560286	50591048	chr14:50560286-50591048	0	+	50588045	50591048	789624	3	214,248,108,	0,27544,30654,
#Deleted in new
chr14	50571918	50572140	chr14:50571918-50572140	7	-	50571918	50571918	16724991	1	222,	0,
#Deleted in new
chr14	50590988	50591817	chr14:50590988-50591817	0	+	50590988	50590988	8553170	2	87,283,	0,546,
#Partially deleted in new
chr14	50614378	50628151	chr14:50614378-50628151	0	+	50614378	50621868	789624	4	133,57,72,121,	0,7464,8798,13652,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	50628165	50632320	chr14:50628165-50632320	0	+	50628165	50630937	789624	4	297,15,146,92,	0,1829,2766,4063,
#Partially deleted in new
chr14	50632057	50665509	chr14:50632057-50665509	0	-	50634152	50665509	789624	5	2117,171,144,271,331,	0,3156,8692,12686,33121,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	50633635	50668331	chr14:50633635-50668331	3	-	50635182	50667967	0	5	1749,144,271,441,458,	0,7114,11108,31543,34238,
#Partially deleted in new
chr14	50634827	50665365	chr14:50634827-50665365	0	-	50635367	50665365	789624	2	557,187,	0,30351,
#Partially deleted in new
chr14	50635112	50644809	chr14:50635112-50644809	0	-	50635182	50644809	789624	2	272,66,	0,9631,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	50637690	50637981	chr14:50637690-50637981	3	-	50637690	50637690	8553170	1	291,	0,
#Deleted in new
chr14	50662510	50663178	chr14:50662510-50663178	3	-	50662510	50662510	8553170	1	668,	0,
#Deleted in new
chr14	50664255	50665125	chr14:50664255-50665125	0	-	50664255	50664255	8553170	1	870,	0,
#Deleted in new
chr14	50665600	50668297	chr14:50665600-50668297	0	-	50665600	50667967	789624	3	19,119,424,	0,1781,2273,
#Deleted in new
chr14	50704342	50705511	chr14:50704342-50705511	7	-	50704342	50704342	16724991	1	1169,	0,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr14	50719762	50831121	chr14:50719762-50831121	1	-	50723462	50822056	789624	31	3910,114,201,102,147,180,147,114,123,114,216,70,126,2139,503,122,139,90,111,175,141,137,168,147,191,40,170,82,204,54,116,	0,6190,9760,15753,18377,19545,21819,23653,24480,28229,32755,34800,34979,36729,40094,42027,44063,46544,47017,50625,51089,51569,52538,53186,57186,59002,72949,86974,102111,110701,111243,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr14	50719816	50831046	chr14:50719816-50831046	0	-	50729691	50822056	789624	32	3856,114,201,61,102,147,180,147,114,123,114,216,70,126,2139,503,122,139,90,111,175,141,137,168,147,191,40,170,82,204,54,41,	0,6136,9706,11106,15699,18323,19491,21765,23599,24426,28175,32701,34746,34925,36675,40040,41973,44009,46490,46963,50571,51035,51515,52484,53132,57132,58948,72895,86920,102057,110647,111189,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr14	50721496	50822056	chr14:50721496-50822056	1	-	50723462	50822056	789624	29	2176,114,201,102,147,180,147,114,123,114,216,70,126,2139,503,122,139,90,111,175,141,137,168,147,191,40,170,82,183,	0,4456,8026,14019,16643,17811,20085,21919,22746,26495,31021,33066,33245,34995,38360,40293,42329,44810,45283,48891,49355,49835,50804,51452,55452,57268,71215,85240,100377,
#Deleted in new
chr14	50723417	50726414	chr14:50723417-50726414	0	-	50723417	50723417	8553170	2	255,462,	0,2535,
#Deleted in new
chr14	50723776	50724272	chr14:50723776-50724272	3	-	50723776	50723776	8553170	1	496,	0,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr14	50725826	50830479	chr14:50725826-50830479	1	-	50725871	50822056	789624	28	240,201,102,147,180,147,114,123,114,216,70,126,503,122,139,90,111,175,141,137,168,147,191,40,170,82,204,16,	0,3696,9689,12313,13481,15755,17589,18416,22165,26691,28736,28915,34030,35963,37999,40480,40953,44561,45025,45505,46474,47122,51122,52938,66885,80910,96047,104637,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr14	50725827	50766795	chr14:50725827-50766795	0	-	50725871	50766795	789624	18	239,201,102,147,180,147,114,123,114,216,70,126,2139,503,122,139,90,16,	0,3695,9688,12312,13480,15754,17588,18415,22164,26690,28735,28914,30664,34029,35962,37998,40479,40952,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr14	50725832	50831121	chr14:50725832-50831121	1	-	50725871	50822056	789624	29	234,201,102,147,180,147,114,123,114,216,70,126,503,122,139,90,111,175,141,137,168,147,191,40,170,82,204,54,116,	0,3690,9683,12307,13475,15749,17583,18410,22159,26685,28730,28909,34024,35957,37993,40474,40947,44555,45019,45499,46468,47116,51116,52932,66879,80904,96041,104631,105173,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr14	50725839	50831121	chr14:50725839-50831121	3	-	50725871	50822056	789624	30	227,201,102,147,180,147,114,123,114,216,70,126,2139,503,122,139,90,111,175,141,137,168,147,191,40,170,82,204,54,116,	0,3683,9676,12300,13468,15742,17576,18403,22152,26678,28723,28902,30652,34017,35950,37986,40467,40940,44548,45012,45492,46461,47109,51109,52925,66872,80897,96034,104624,105166,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr14	50727232	50766795	chr14:50727232-50766795	0	-	50727688	50766795	789624	18	519,201,102,147,180,147,114,123,114,216,70,126,2139,503,122,139,90,16,	0,2290,8283,10907,12075,14349,16183,17010,20759,25285,27330,27509,29259,32624,34557,36593,39074,39547,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr14	50727235	50831121	chr14:50727235-50831121	1	-	50727688	50822056	789624	30	516,201,102,147,180,147,114,123,114,216,70,126,2139,503,122,139,90,111,175,141,137,168,147,191,40,170,82,204,54,116,	0,2287,8280,10904,12072,14346,16180,17007,20756,25282,27327,27506,29256,32621,34554,36590,39071,39544,43152,43616,44096,45065,45713,49713,51529,65476,79501,94638,103228,103770,
#Partially deleted in new
chr14	50727688	50739388	chr14:50727688-50739388	0	-	50729691	50739388	789624	6	63,201,61,102,147,81,	0,1834,3234,7827,10451,11619,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	50739371	50742385	chr14:50739371-50742385	0	-	50739371	50739371	8553170	2	116,804,	0,2210,
#Partially deleted in new
chr14	50770517	50831121	chr14:50770517-50831121	0	-	50770517	50821942	789624	12	45,141,137,168,147,191,40,170,82,127,54,116,	0,334,814,1783,2431,6431,8247,22194,36219,51356,59946,60488,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	50771985	50772998	chr14:50771985-50772998	0	-	50771985	50771985	8553170	2	483,50,	0,963,
#Partially deleted in new
chr14	50792045	50821956	chr14:50792045-50821956	0	-	50792498	50821956	789624	5	216,54,170,82,83,	0,414,666,14691,29828,
#Deleted in new
chr14	50792049	50794518	chr14:50792049-50794518	0	-	50792049	50792049	8553170	3	212,170,83,	0,662,2386,
#Partially deleted in new
chr14	50792843	50830708	chr14:50792843-50830708	0	-	50792843	50822056	789624	4	38,82,204,245,	0,13893,29030,37620,
#Partially deleted in new
chr14	50805916	50830674	chr14:50805916-50830674	0	-	50805916	50805916	8553170	3	902,204,211,	0,15957,24547,
#Deleted in new
chr14	50821879	50823501	chr14:50821879-50823501	3	+	50821879	50821879	789624	2	72,320,	0,1302,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	50831961	50838100	chr14:50831961-50838100	3	+	50831961	50831961	8553170	2	838,1592,	0,4547,
#Deleted in new
chr14	50844624	50844712	chr14:50844624-50844712	3	+	50844624	50844624	8553170	1	88,	0,
#Partially deleted in new
chr14	50848121	50865659	chr14:50848121-50865659	3	+	50848121	50848121	8553170	2	28,146,	0,17392,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr14	50857890	50944456	chr14:50857890-50944456	1	-	50858088	50944403	789624	20	279,67,135,208,142,59,148,102,115,164,147,93,144,83,112,132,104,79,102,296,	0,50380,50930,52004,53839,54087,54265,55138,56810,57445,57934,58751,59071,62650,63065,66078,73782,77216,79845,86270,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr14	50872159	50904970	chr14:50872159-50904970	1	+	50872174	50904366	789624	13	119,128,103,120,31,46,130,38,80,83,79,119,632,	0,5792,6585,8292,9436,13454,13606,14487,16664,29669,31229,31914,32179,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	50872159	50904970	chr14:50872159-50904970	3	+	50872174	50904366	789624	11	119,120,31,46,130,38,80,83,79,119,632,	0,8292,9436,13454,13606,14487,16664,29669,31229,31914,32179,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	50872159	50904970	chr14:50872159-50904970	0	+	50872174	50878823	789624	12	119,103,120,31,46,130,38,80,83,79,119,632,	0,6585,8292,9436,13454,13606,14487,16664,29669,31229,31914,32179,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	50872159	50904970	chr14:50872159-50904970	0	+	50872174	50878823	789624	10	119,103,120,31,38,80,83,79,119,632,	0,6585,8292,9436,14487,16664,29669,31229,31914,32179,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	50872162	50893569	chr14:50872162-50893569	0	+	50872162	50872162	8553170	8	116,120,31,46,130,38,80,2302,	0,8289,9433,13451,13603,14484,16661,19105,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	50891073	50904831	chr14:50891073-50904831	0	+	50891073	50891073	8553170	5	30,83,79,119,493,	0,10755,12315,13000,13265,
#Duplicated in new
chr14	50893739	50904141	chr14:50893739-50904141	0	+	50893739	50893739	8553170	4	19,83,79,136,	0,8089,9649,10266,
#Partially deleted in new
chr14	50905217	50944483	chr14:50905217-50944483	1	-	50905391	50944403	0	19	339,67,135,208,142,59,148,102,115,164,147,93,144,83,112,132,104,79,323,	0,3053,3603,4677,6512,6760,6938,7811,9483,10118,10607,11424,11744,15323,15738,18751,26455,29889,38943,
#Partially deleted in new
chr14	50905220	50944736	chr14:50905220-50944736	3	-	50905391	50944403	0	20	336,67,135,208,142,59,148,102,115,164,147,93,144,83,112,132,104,79,102,576,	0,3050,3600,4674,6509,6757,6935,7808,9480,10115,10604,11421,11741,15320,15735,18748,26452,29886,32515,38940,
#Partially deleted in new
chr14	50908141	50911871	chr14:50908141-50911871	0	-	50908141	50908141	8553170	4	196,135,208,142,	0,679,1753,3588,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	50912225	50913358	chr14:50912225-50913358	3	+	50912225	50912225	8553170	2	178,357,	0,776,
#Deleted in new
chr14	50915189	50915940	chr14:50915189-50915940	0	-	50915189	50915189	8553170	2	310,116,	0,635,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	50917015	50921528	chr14:50917015-50921528	0	-	50917015	50917015	8553170	3	90,83,573,	0,3525,3940,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	50923236	50944470	chr14:50923236-50944470	0	-	50923236	50923236	8553170	5	864,104,79,102,310,	0,8436,11870,14499,20924,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	50956258	50962002	chr14:50956258-50962002	3	-	50956258	50956258	8553170	2	4357,357,	0,5387,
#Partially deleted in new
chr14	50975261	51096061	chr14:50975261-51096061	3	-	50977290	51094939	0	10	2092,163,304,139,158,154,111,123,96,1944,	0,4125,6538,22788,25421,33818,35122,47573,50003,118856,
#Partially deleted in new
chr14	50978777	51095329	chr14:50978777-51095329	1	-	50979290	51094939	0	12	772,304,24,42,189,139,146,154,111,123,96,1212,	0,3022,4164,4602,7178,19272,21905,30302,31606,44057,46487,115340,
#Partially deleted in new
chr14	50979507	50982311	chr14:50979507-50982311	0	-	50979507	50979507	8553170	2	42,512,	0,2292,
#Partially deleted in new
chr14	50982682	50988376	chr14:50982682-50988376	0	-	50982682	50982682	8553170	4	283,42,189,36,	0,697,3273,5658,
#Deleted in new
chr14	50982864	50986452	chr14:50982864-50986452	0	-	50982864	50982864	8553170	3	101,42,497,	0,515,3091,
#Partially deleted in new
chr14	50996063	51095076	chr14:50996063-51095076	1	-	50997999	51094939	0	7	2125,158,154,111,123,96,959,	0,4619,13016,14320,26771,29201,98054,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	51088956	51091288	chr14:51088956-51091288	3	+	51088956	51088956	8553170	3	419,47,665,	0,1030,1667,
#Partially deleted in new
chr14	51240161	51245851	chr14:51240161-51245851	0	+	51240161	51240161	8553170	3	283,121,539,	0,3694,5151,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	51240167	51257546	chr14:51240167-51257546	3	+	51240292	51254519	0	8	277,116,46,129,46,102,73,3206,	0,3688,5145,6924,9158,9300,9525,14173,
#Partially deleted in new
chr14	51240249	51255654	chr14:51240249-51255654	0	+	51240292	51245362	789624	8	195,116,142,129,46,102,73,1314,	0,3606,5063,6842,9076,9218,9443,14091,
#Deleted in new
chr14	51244089	51244224	chr14:51244089-51244224	3	+	51244089	51244089	8553170	1	135,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	51253932	51254023	chr14:51253932-51254023	3	-	51253932	51253932	8553170	1	91,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	51304415	51328386	chr14:51304415-51328386	3	-	51304415	51304415	8553170	2	425,257,	0,23714,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	51333392	51365557	chr14:51333392-51365557	3	+	51333392	51333392	789624	5	172,54,75,80,195,	0,15114,16276,16900,31970,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	51333540	51365529	chr14:51333540-51365529	1	+	51333540	51333540	8553170	5	24,54,75,178,167,	0,14966,16128,16654,31822,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	51333541	51342967	chr14:51333541-51342967	1	+	51333541	51333541	8553170	2	23,685,	0,8741,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	51344913	51385603	chr14:51344913-51385603	3	-	51344913	51344913	8553170	4	162,141,467,43,	0,7668,16773,40647,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	51360717	51365545	chr14:51360717-51365545	0	+	51360717	51360717	8553170	2	209,183,	0,4645,
#Partially deleted in new
chr14	51392127	51397135	chr14:51392127-51397135	3	-	51392127	51392127	5263520	4	204,82,150,136,	0,840,1332,4872,
#Deleted in new
chr14	51436037	51436963	chr14:51436037-51436963	7	+	51436037	51436037	16724991	1	926,	0,
#Partially deleted in new
chr14	51454511	51599952	chr14:51454511-51599952	3	-	51454511	51454511	789624	3	304,118,126,	0,129654,145315,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	51489099	51689745	chr14:51489099-51689745	0	+	51489099	51489099	8553170	4	321,124,63,55,	0,2311,81248,200591,
#Partially deleted in new
chr14	51489136	51730459	chr14:51489136-51730459	3	+	51689836	51728029	789624	15	284,63,245,91,80,77,187,156,66,69,175,336,132,92,2715,	0,81211,200554,209005,211919,213375,215612,218941,222394,223346,226188,230918,232812,236642,238608,
#Deleted in new
chr14	51522863	51522967	chr14:51522863-51522967	3	+	51522863	51522863	8553170	1	104,	0,
#Partially deleted in new
chr14	51546628	51599920	chr14:51546628-51599920	1	-	51546628	51546628	789624	4	192,177,118,94,	0,1078,37537,53198,
#Partially deleted in new
chr14	51554659	51579297	chr14:51554659-51579297	0	+	51554659	51554659	8553170	3	146,63,326,	0,15688,24312,
#Partially deleted in new
chr14	51554668	51576205	chr14:51554668-51576205	0	+	51554668	51554668	8553170	3	137,63,559,	0,15679,20978,
#Partially deleted in new
chr14	51554682	51576080	chr14:51554682-51576080	0	+	51554682	51554682	8553170	3	123,63,324,	0,15665,21074,
#Partially deleted in new
chr14	51565226	51643738	chr14:51565226-51643738	0	+	51565226	51565226	8553170	3	214,63,287,	0,5121,78225,
#Deleted in new
chr14	51637347	51637947	chr14:51637347-51637947	3	-	51637347	51637347	8553170	1	600,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	51649515	51651744	chr14:51649515-51651744	3	-	51649515	51649515	789624	1	2229,	0,
#Partially deleted in new
chr14	51651857	51730727	chr14:51651857-51730727	1	+	51689836	51728029	789624	14	139,245,91,80,77,187,156,66,69,175,336,132,92,2983,	0,37833,46284,49198,50654,52891,56220,59673,60625,63467,68197,70091,73921,75887,
#Partially deleted in new
chr14	51651946	51728936	chr14:51651946-51728936	1	+	51689836	51728029	789624	14	50,245,91,104,77,187,156,66,69,175,336,132,92,1192,	0,37744,46195,49109,50565,52802,56131,59584,60536,63378,68108,70002,73832,75798,
#Partially deleted in new
chr14	51651979	51698227	chr14:51651979-51698227	0	+	51689836	51698227	789624	3	238,245,86,	0,37711,46162,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	51692751	51692861	chr14:51692751-51692861	7	+	51692751	51692751	16724991	1	110,	0,
#Deleted in new
chr14	51697987	51708088	chr14:51697987-51708088	0	+	51701072	51708088	789624	5	245,104,77,187,11,	0,3068,4524,6761,10090,
#Partially deleted in new
chr14	51698112	51730430	chr14:51698112-51730430	1	+	51701072	51728029	789624	12	120,80,77,187,156,66,69,175,336,132,92,2686,	0,2943,4399,6636,9965,13418,14370,17212,21942,23836,27666,29632,
#Deleted in new
chr14	51702547	51708344	chr14:51702547-51708344	0	+	51702547	51708239	789624	3	41,187,267,	0,2201,5530,
#Partially deleted in new
chr14	51704617	51712506	chr14:51704617-51712506	0	+	51704617	51704617	8553170	4	318,156,66,24,	0,3460,6913,7865,
#Partially deleted in new
chr14	51704638	51715479	chr14:51704638-51715479	0	+	51704638	51704638	8553170	5	81,156,66,69,155,	0,3439,6892,7844,10686,
#Partially deleted in new
chr14	51712512	51720525	chr14:51712512-51720525	0	+	51712512	51720458	789624	3	39,175,471,	0,2812,7542,
#Partially deleted in new
chr14	51713646	51730454	chr14:51713646-51730454	0	+	51713646	51713646	8553170	5	1853,336,132,92,2710,	0,6408,8302,12132,14098,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	51717254	51728769	chr14:51717254-51728769	1	+	51720104	51728029	789624	5	94,336,132,92,1025,	0,2800,4694,8524,10490,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	51717254	51725795	chr14:51717254-51725795	0	+	51720104	51725795	789624	4	94,336,126,17,	0,2800,4700,8524,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	51724102	51724209	chr14:51724102-51724209	3	+	51724102	51724102	8553170	1	107,	0,
#Deleted in new
chr14	51756995	51757988	chr14:51756995-51757988	7	+	51756995	51756995	16724991	1	993,	0,
#Deleted in new
chr14	51763055	51764076	chr14:51763055-51764076	7	-	51763055	51763055	16724991	1	1021,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	51765275	51825422	chr14:51765275-51825422	3	+	51765275	51765275	8553170	10	1865,103,1660,130,110,75,229,1292,80,438,	0,24437,43345,46932,50319,51686,52778,53557,57028,59709,
#Deleted in new
chr14	51771788	51772086	chr14:51771788-51772086	7	-	51771788	51771788	16724991	1	298,	0,
#Deleted in new
chr14	51787460	51787743	chr14:51787460-51787743	7	+	51787460	51787460	16724991	1	283,	0,
#Partially deleted in new
chr14	51826194	51966843	chr14:51826194-51966843	1	+	51827743	51966687	789624	4	36,140,116,285,	0,1473,124455,140364,
#Partially deleted in new
chr14	51826199	51966752	chr14:51826199-51966752	0	+	51827743	51950658	789624	5	31,140,41,116,194,	0,1468,51417,124450,140359,
#Partially deleted in new
chr14	51826199	51966777	chr14:51826199-51966777	1	+	51827786	51966687	789624	5	31,140,67,116,219,	0,1468,15306,124450,140359,
#Partially deleted in new
chr14	51847125	51979342	chr14:51847125-51979342	0	+	51950678	51979342	789624	4	253,41,116,69,	0,30491,103524,132148,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	51847171	51913336	chr14:51847171-51913336	0	+	51847171	51847171	8553170	3	207,41,328,	0,30445,65837,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	51847233	51967040	chr14:51847233-51967040	0	+	51847233	51847233	8553170	7	145,201,41,311,116,246,482,	0,26648,30383,92547,103416,104653,119325,
#Partially deleted in new
chr14	51847233	51967038	chr14:51847233-51967038	3	+	51950678	51966687	0	6	145,201,41,311,116,480,	0,26648,30383,92547,103416,119325,
#Partially deleted in new
chr14	51860413	51969794	chr14:51860413-51969794	1	+	51950678	51966687	0	3	377,116,3236,	0,90236,106145,
#Partially deleted in new
chr14	51860640	51878044	chr14:51860640-51878044	0	+	51860640	51860640	8553170	2	150,428,	0,16976,
#Partially deleted in new
chr14	51860641	51967040	chr14:51860641-51967040	1	+	51950678	51966687	0	5	149,41,120,116,482,	0,16975,52367,90008,105917,
#Partially deleted in new
chr14	51860645	51968381	chr14:51860645-51968381	1	+	51950678	51966687	0	4	145,41,116,1823,	0,16971,90004,105913,
#Partially deleted in new
chr14	51860733	51967161	chr14:51860733-51967161	0	+	51860733	51860733	8553170	3	57,41,451,	0,16883,105977,
#Partially deleted in new
chr14	51861323	51966903	chr14:51861323-51966903	1	+	51950678	51966687	0	4	67,41,116,345,	0,16293,89326,105235,
#Partially deleted in new
chr14	51877591	51969800	chr14:51877591-51969800	1	+	51950678	51966687	0	3	66,116,3242,	0,73058,88967,
#Partially deleted in new
chr14	51877633	51940399	chr14:51877633-51940399	0	+	51877633	51877633	8553170	3	24,120,619,	0,35375,62147,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	51913111	51952018	chr14:51913111-51952018	1	+	51914216	51951898	789624	4	17,165,116,132,	0,998,37538,38775,
#Partially deleted in new
chr14	51916144	51918571	chr14:51916144-51918571	3	-	51916144	51916144	789624	3	363,143,23,	0,1189,2404,
#Deleted in new
chr14	51967002	51969800	chr14:51967002-51969800	3	-	51967002	51967002	8553170	2	401,78,	0,2720,
#Partially deleted in new
chr14	51982519	51987219	chr14:51982519-51987219	3	-	51982519	51982519	8553170	2	410,57,	0,4643,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	51989474	52010691	chr14:51989474-52010691	3	+	51989639	52004516	789624	8	226,125,100,87,89,69,49,6330,	0,1842,4248,9019,10233,12323,14719,14887,
#Partially deleted in new
chr14	51989513	52001866	chr14:51989513-52001866	0	+	51989639	51998514	789624	5	187,125,87,89,69,	0,1803,8980,10194,12284,
#Partially deleted in new
chr14	51989614	52004653	chr14:51989614-52004653	1	+	51989639	52004409	789624	8	86,125,100,87,89,69,3,292,	0,1702,4108,8879,10093,12183,14625,14747,
#Partially deleted in new
chr14	51993725	52004702	chr14:51993725-52004702	0	+	51993725	52004409	789624	5	97,87,89,69,341,	0,4768,5982,8072,10636,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	51997924	51999873	chr14:51997924-51999873	0	+	51997924	51997924	8553170	2	656,166,	0,1783,
#Deleted in new
chr14	51999337	52001916	chr14:51999337-52001916	0	+	51999337	51999337	8553170	2	459,119,	0,2460,
#Deleted in new
chr14	52004011	52004692	chr14:52004011-52004692	0	+	52004011	52004011	8553170	2	231,331,	0,350,
#Partially deleted in new
chr14	52004802	52068994	chr14:52004802-52068994	3	-	52005485	52068994	789624	22	694,113,124,158,172,130,170,222,234,120,144,129,144,231,201,246,150,360,302,233,306,228,	0,934,1734,3007,6073,6751,9484,10251,14258,15256,22398,23919,24744,33944,35848,37302,37979,48776,49217,55321,63055,63964,
#Partially deleted in new
chr14	52004802	52069228	chr14:52004802-52069228	1	-	52005485	52068994	789624	18	694,113,124,158,172,130,170,222,234,120,144,129,144,231,201,235,144,462,	0,934,1734,3007,6073,6751,9484,10251,14258,15256,22398,23919,24744,33944,35848,37302,63217,63964,
#Deleted in new
chr14	52005215	52007924	chr14:52005215-52007924	0	-	52005215	52005215	8553170	3	281,924,115,	0,521,2594,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	52005303	52008106	chr14:52005303-52008106	0	-	52005303	52005303	8553170	4	193,113,124,297,	0,433,1233,2506,
#Partially deleted in new
chr14	52005454	52038952	chr14:52005454-52038952	0	-	52005485	52038952	789624	13	42,113,124,158,172,130,170,222,234,120,129,144,206,	0,282,1082,2355,5421,6099,8832,9599,13606,14604,23267,24092,33292,
#Partially deleted in new
chr14	52007809	52012021	chr14:52007809-52012021	0	-	52007809	52007809	8553170	3	158,172,468,	0,3066,3744,
#Partially deleted in new
chr14	52014331	52020262	chr14:52014331-52020262	0	-	52014331	52014331	8553170	4	125,209,50,204,	0,722,4913,5727,
#Partially deleted in new
chr14	52028622	52042111	chr14:52028622-52042111	0	-	52028622	52028622	8553170	5	228,144,231,201,7,	0,924,10124,12028,13482,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	52111121	52129625	chr14:52111121-52129625	3	-	52111121	52111121	8553170	3	200,104,45,	0,12551,18459,
#Deleted in new
chr14	52117601	52117995	chr14:52117601-52117995	7	+	52117601	52117601	16724991	1	394,	0,
#Deleted in new
chr14	52155739	52156179	chr14:52155739-52156179	7	+	52155739	52155739	16724991	1	440,	0,
#Partially deleted in new
chr14	52267712	52276724	chr14:52267712-52276724	3	+	52267814	52274964	789624	2	948,1994,	0,7018,
#Partially deleted in new
chr14	52267811	52275006	chr14:52267811-52275006	1	+	52267814	52269495	789624	3	849,91,276,	0,1639,6919,
#Partially deleted in new
chr14	52286796	52289268	chr14:52286796-52289268	7	+	52286796	52286796	16724991	3	504,151,1294,	0,677,1178,
#Partially deleted in new
chr14	52314304	52327509	chr14:52314304-52327509	1	+	52315313	52327454	789624	3	197,157,289,	0,930,12916,
#Partially deleted in new
chr14	52314394	52328606	chr14:52314394-52328606	3	+	52314548	52327454	789624	2	997,1386,	0,12826,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr14	52430589	52552506	chr14:52430589-52552506	3	-	52432303	52543557	789624	21	1998,191,161,139,85,137,169,60,144,124,61,167,151,91,122,75,74,83,233,108,191,	0,8614,9974,24734,26500,39447,39922,51640,52232,57773,59801,60249,80650,84290,88582,106129,107009,111781,112808,113674,121726,
#Partially deleted in new
chr14	52439258	52552522	chr14:52439258-52552522	0	-	52439258	52439258	8553170	3	136,161,207,	0,1305,113057,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	52455440	52470674	chr14:52455440-52470674	0	-	52462947	52470674	789624	5	22,85,159,137,163,	0,1649,7371,14596,15071,
#Partially deleted in new
chr14	52488362	52552505	chr14:52488362-52552505	0	-	52488362	52488420	789624	4	124,61,167,190,	0,2028,2476,63953,
#Partially deleted in new
chr14	52553147	52637713	chr14:52553147-52637713	3	+	52553147	52635115	789624	7	444,44,229,150,126,119,2776,	0,45124,46965,79012,80382,80680,81790,
#Partially deleted in new
chr14	52553287	52636725	chr14:52553287-52636725	0	+	52553287	52635115	789624	8	304,44,229,48,150,126,119,1788,	0,44984,46825,60383,78872,80242,80540,81650,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	52553418	52632260	chr14:52553418-52632260	0	+	52553418	52632260	789624	5	173,66,44,229,101,	0,43498,44853,46694,78741,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	52611479	52637713	chr14:52611479-52637713	0	+	52611479	52611479	8553170	5	2239,150,126,119,2776,	0,20680,22050,22348,23458,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr14	52639915	52695705	chr14:52639915-52695705	3	-	52643569	52695481	0	16	3715,134,87,70,247,93,27,12,47,121,74,77,39,84,120,338,	0,6238,6459,12323,13153,18001,18208,21377,23885,26459,31714,31879,38518,42409,43872,55452,
#Partially deleted in new
chr14	52643215	52646410	chr14:52643215-52646410	0	-	52643215	52643215	8553170	2	415,257,	0,2938,
#Partially deleted in new
chr14	52643287	52695888	chr14:52643287-52695888	0	-	52657948	52695481	789624	14	343,134,87,70,247,110,67,121,74,77,39,84,120,521,	0,2866,3087,8951,9781,14629,20493,23087,28342,28507,35146,39037,40500,52080,
#Partially deleted in new
chr14	52643404	52695900	chr14:52643404-52695900	0	-	52657948	52695481	789624	13	226,87,70,247,110,67,121,74,77,39,84,120,533,	0,2970,8834,9664,14512,20376,22970,28225,28390,35029,38920,40383,51963,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	52646191	52647124	chr14:52646191-52647124	0	-	52646191	52646191	8553170	2	96,750,	0,183,
#Partially deleted in new
chr14	52646251	52658541	chr14:52646251-52658541	0	-	52646251	52653100	789624	6	36,87,70,247,93,418,	0,123,5987,6817,11665,11872,
#Partially deleted in new
chr14	52646378	52664202	chr14:52646378-52664202	0	-	52646378	52646378	8553170	7	83,70,247,93,27,12,402,	0,5860,6690,11538,11745,14914,17422,
#Partially deleted in new
chr14	52657948	52695705	chr14:52657948-52695705	1	-	52657948	52695481	789624	9	78,67,121,74,77,39,84,120,338,	0,5832,8426,13681,13846,20485,24376,25839,37419,
#Partially deleted in new
chr14	52666376	52695529	chr14:52666376-52695529	0	-	52666376	52695481	789624	6	119,74,77,39,84,162,	0,5253,5418,12057,15948,28991,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	52671573	52672235	chr14:52671573-52672235	0	-	52671573	52671573	8553170	2	130,441,	0,221,
#Partially deleted in new
chr14	52671824	52695529	chr14:52671824-52695529	0	-	52678412	52695481	789624	5	47,154,84,120,162,	0,6494,10500,11963,23543,
#Partially deleted in new
chr14	52707171	52728587	chr14:52707171-52728587	3	+	52707177	52727617	789624	14	133,80,40,53,68,115,88,62,124,62,121,81,72,1089,	0,1137,1311,1592,3929,4238,6709,10909,11057,11805,13689,13938,16793,20327,
#Partially deleted in new
chr14	52707177	52709089	chr14:52707177-52709089	0	+	52707177	52707177	8553170	4	127,80,40,326,	0,1131,1305,1586,
#Partially deleted in new
chr14	52707177	52727995	chr14:52707177-52727995	1	+	52707177	52727617	789624	14	127,80,40,53,68,115,88,62,124,62,121,81,72,497,	0,1131,1305,1586,3923,4232,6703,10903,11051,11799,13683,13932,16787,20321,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	52707183	52718688	chr14:52707183-52718688	0	+	52707183	52707183	8553170	7	121,40,53,68,115,88,608,	0,1299,1580,3917,4226,6697,10897,
#Partially deleted in new
chr14	52707191	52718302	chr14:52707191-52718302	0	+	52707219	52711445	789624	8	113,80,40,53,115,88,62,74,	0,1117,1291,1572,4218,6689,10889,11037,
#Partially deleted in new
chr14	52707200	52708833	chr14:52707200-52708833	0	+	52707200	52707200	8553170	3	104,80,351,	0,1108,1282,
#Partially deleted in new
chr14	52707201	52713902	chr14:52707201-52713902	0	+	52707219	52707330	789624	7	328,80,40,53,68,115,22,	0,1107,1281,1562,3899,4208,6679,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	52707201	52710335	chr14:52707201-52710335	0	+	52707201	52707201	8553170	5	103,80,40,53,761,	0,1107,1281,1562,2373,
#Partially deleted in new
chr14	52707203	52727991	chr14:52707203-52727991	1	+	52707219	52727617	0	14	101,80,40,53,68,115,88,62,124,62,121,81,72,493,	0,1105,1279,1560,3897,4206,6677,10877,11025,11773,13657,13906,16761,20295,
#Partially deleted in new
chr14	52707208	52718339	chr14:52707208-52718339	0	+	52707219	52708530	789624	8	96,80,224,68,115,88,62,111,	0,1100,1274,3892,4201,6672,10872,11020,
#Partially deleted in new
chr14	52707218	52718339	chr14:52707218-52718339	0	+	52707219	52718339	789624	7	86,53,68,115,88,62,111,	0,1545,3882,4191,6662,10862,11010,
#Partially deleted in new
chr14	52707221	52724036	chr14:52707221-52724036	0	+	52707221	52724036	789624	10	83,80,40,53,68,115,88,62,124,72,	0,1087,1261,1542,3879,4188,6659,10859,11007,16743,
#Partially deleted in new
chr14	52707230	52708666	chr14:52707230-52708666	0	+	52707230	52707330	789624	3	299,80,184,	0,1078,1252,
#Partially deleted in new
chr14	52707286	52709607	chr14:52707286-52709607	0	+	52707286	52707330	789624	4	243,80,224,33,	0,1022,1196,2288,
#Partially deleted in new
chr14	52710545	52714032	chr14:52710545-52714032	0	+	52710545	52710545	8553170	3	623,115,152,	0,864,3335,
#Partially deleted in new
chr14	52718230	52727994	chr14:52718230-52727994	0	+	52718230	52723982	789624	4	122,62,72,496,	0,746,5734,9268,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	52718506	52720978	chr14:52718506-52720978	0	+	52718506	52718506	8553170	2	532,118,	0,2354,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	52721499	52727990	chr14:52721499-52727990	0	+	52721499	52721499	8553170	3	2375,72,492,	0,2465,5999,
#Partially deleted in new
chr14	52723744	52727817	chr14:52723744-52727817	0	+	52723744	52723744	8553170	2	292,319,	0,3754,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	52730179	52774941	chr14:52730179-52774941	1	+	52730474	52771106	0	12	31,73,33,54,98,61,37,40,51,73,94,3909,	0,279,14672,16246,20503,26371,27139,27563,27694,29502,38660,40853,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	52730181	52774998	chr14:52730181-52774998	3	+	52730474	52771106	0	11	350,33,54,98,61,37,40,51,73,94,3966,	0,14670,16244,20501,26369,27137,27561,27692,29500,38658,40851,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	52775193	52791601	chr14:52775193-52791601	3	-	52778310	52784650	0	6	3265,62,128,63,168,174,	0,5485,6590,8229,9303,16234,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	52775236	52777740	chr14:52775236-52777740	3	+	52775236	52775236	8553170	2	710,188,	0,2316,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	52775687	52791483	chr14:52775687-52791483	1	-	52778310	52784650	789624	7	259,1591,62,128,63,158,56,	0,1180,4991,6096,7735,8809,15740,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	52775863	52777081	chr14:52775863-52777081	0	-	52775863	52775863	8553170	2	183,233,	0,985,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	52776351	52777140	chr14:52776351-52777140	1	+	52776351	52776351	8553170	2	249,279,	0,510,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	52776556	52791510	chr14:52776556-52791510	1	-	52778310	52783426	789624	5	1902,62,128,63,83,	0,4122,5227,6866,14871,
#Partially deleted in new
chr14	52778374	52791668	chr14:52778374-52791668	0	-	52778374	52784650	789624	7	84,62,128,63,168,39,241,	0,2304,3409,5048,6122,9458,13053,
#Deleted in new
chr14	52781740	52783485	chr14:52781740-52783485	0	-	52781740	52781740	8553170	2	171,63,	0,1682,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	52792874	52820034	chr14:52792874-52820034	3	-	52792874	52792874	8553170	2	86,110,	0,27050,
#Partially deleted in new
chr14	52798903	52799061	chr14:52798903-52799061	7	-	52798903	52798903	16724991	1	158,	0,
#Partially deleted in new
chr14	52857267	52951097	chr14:52857267-52951097	3	-	52858376	52950568	0	15	1283,142,125,222,107,125,50,135,108,103,226,135,234,166,177,	0,2305,3073,7133,7479,15531,16909,17955,21314,23768,23976,36025,61855,93144,93653,
#Partially deleted in new
chr14	52857267	52951035	chr14:52857267-52951035	1	-	52858376	52950568	0	15	1283,142,125,222,107,125,50,135,108,103,226,135,234,166,208,	0,2305,3073,7133,7479,15531,16909,17955,21314,23768,23976,36025,61855,93144,93560,
#Partially deleted in new
chr14	52857270	52919339	chr14:52857270-52919339	0	-	52858376	52919339	789624	15	1280,142,125,21,222,107,125,50,135,108,103,226,33,135,217,	0,2302,3070,3743,7130,7476,15528,16906,17952,21311,23765,23973,24525,36022,61852,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	52857270	52863677	chr14:52857270-52863677	0	-	52857270	52857270	8553170	2	4914,1087,	0,5320,
#Partially deleted in new
chr14	52857271	52861303	chr14:52857271-52861303	0	-	52857271	52857271	8553170	3	1279,142,963,	0,2301,3069,
#Partially deleted in new
chr14	52857274	52950992	chr14:52857274-52950992	1	-	52858376	52950568	0	16	1276,142,125,21,222,107,125,50,135,108,103,226,135,234,166,72,	0,2298,3066,3739,7126,7472,15524,16902,17948,21307,23761,23969,36018,61848,93137,93646,
#Partially deleted in new
chr14	52857530	52893333	chr14:52857530-52893333	0	-	52858376	52893333	789624	15	1020,142,125,21,24,222,107,125,50,135,108,103,226,33,41,	0,2042,2810,3483,4056,6870,7216,15268,16646,17692,21051,23505,23713,24265,35762,
#Partially deleted in new
chr14	52858376	52950568	chr14:52858376-52950568	1	-	52858376	52950568	0	15	174,142,125,21,222,107,125,50,135,108,103,226,135,234,157,	0,1196,1964,2637,6024,6370,14422,15800,16846,20205,22659,22867,34916,60746,92035,
#Partially deleted in new
chr14	52859305	52864521	chr14:52859305-52864521	0	-	52859560	52864521	789624	3	409,125,121,	0,1035,5095,
#Partially deleted in new
chr14	52859487	52951018	chr14:52859487-52951018	1	-	52859560	52950568	0	15	227,125,21,222,107,125,50,135,108,103,226,135,234,166,98,	0,853,1526,4913,5259,13311,14689,15735,19094,21548,21756,33805,59635,90924,91433,
#Partially deleted in new
chr14	52859572	52873710	chr14:52859572-52873710	0	-	52859572	52859572	8553170	7	142,125,21,222,107,125,49,	0,768,1441,4828,5174,13226,14089,
#Deleted in new
chr14	52871457	52872217	chr14:52871457-52872217	7	+	52871457	52871457	16724991	1	760,	0,
#Partially deleted in new
chr14	52881108	52928420	chr14:52881108-52928420	0	-	52881108	52919198	789624	5	30,226,135,234,75,	0,135,12184,38014,47237,
#Partially deleted in new
chr14	52893287	52928399	chr14:52893287-52928399	0	-	52893287	52928044	789624	3	140,234,380,	0,25835,34732,
#Partially deleted in new
chr14	52893358	52952435	chr14:52893358-52952435	0	-	52893358	52950568	789624	4	69,234,166,118,	0,25764,57053,58959,
#Partially deleted in new
chr14	52893375	52950911	chr14:52893375-52950911	0	-	52919334	52950568	789624	5	52,234,19,166,84,	0,25747,55186,57036,57452,
#Deleted in new
chr14	53011970	53012267	chr14:53011970-53012267	7	+	53011970	53011970	16724991	1	297,	0,
#Partially deleted in new
chr14	53023054	53023597	chr14:53023054-53023597	7	+	53023054	53023054	16724991	2	59,188,	0,355,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr14	53036744	53153204	chr14:53036744-53153204	1	-	53046767	53153098	789624	13	10205,192,253,150,76,263,107,107,148,129,21,174,944,	0,17693,18915,21732,24381,26198,35852,36996,55040,56571,66286,66938,115516,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	53036744	53153098	chr14:53036744-53153098	1	-	53046767	53153098	789624	14	10205,84,192,253,150,76,263,107,107,148,129,174,58,393,	0,15099,17693,18915,21732,24381,26198,35852,36996,55040,56571,66938,115516,115961,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr14	53043967	53153098	chr14:53043967-53153098	1	-	53046767	53153098	789624	13	2982,84,192,253,150,76,263,107,107,148,129,174,838,	0,7876,10470,11692,14509,17158,18975,28629,29773,47817,49348,59715,108293,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	53043967	53153282	chr14:53043967-53153282	3	-	53046767	53153098	789624	12	2982,192,253,150,76,263,107,107,148,129,174,1022,	0,10470,11692,14509,17158,18975,28629,29773,47817,49348,59715,108293,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	53046026	53093664	chr14:53046026-53093664	0	-	53046026	53046026	8553170	9	923,192,253,150,76,263,107,107,1880,	0,8411,9633,12450,15099,16916,26570,27714,45758,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	53048547	53053086	chr14:53048547-53053086	0	-	53048547	53048547	8553170	2	486,80,	0,4459,
#Partially deleted in new
chr14	53052509	53061324	chr14:53052509-53061324	0	-	53052509	53052509	8553170	4	2120,253,150,199,	0,3150,5967,8616,
#Partially deleted in new
chr14	53091910	53093851	chr14:53091910-53093851	0	-	53091910	53091910	8553170	2	22,536,	0,1405,
#Partially deleted in new
chr14	53093321	53150086	chr14:53093321-53150086	0	-	53093321	53103836	789624	3	123,174,302,	0,10361,56463,
#Partially deleted in new
chr14	53103298	53152400	chr14:53103298-53152400	0	-	53103298	53103298	8553170	2	558,140,	0,48962,
#Partially deleted in new
chr14	53153353	53157528	chr14:53153353-53157528	3	+	53153353	53153353	789624	3	378,331,367,	0,2889,3808,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	53169053	53326711	chr14:53169053-53326711	1	+	53169053	53169053	8553170	4	222,73,108,111,	0,651,148977,157547,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	53217711	53687258	chr14:53217711-53687258	1	+	53217711	53217711	8553170	4	344,108,50,60,	0,100319,151740,469487,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	53217890	53369501	chr14:53217890-53369501	1	+	53217890	53217890	8553170	4	165,246,108,47,	0,86917,100140,151564,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	53217954	53786106	chr14:53217954-53786106	3	+	53217954	53217954	8553170	10	101,75,108,50,176,100,62,119,106,379,	0,95761,100076,151497,469244,519712,547703,551060,567190,567773,
#Partially deleted in new
chr14	53369380	53526242	chr14:53369380-53526242	1	+	53369380	53369380	8553170	2	121,432,	0,156430,
#Deleted in new
chr14	53590942	53591374	chr14:53590942-53591374	0	+	53590942	53590942	8553170	1	432,	0,
#Partially deleted in new
chr14	53599831	53614026	chr14:53599831-53614026	3	-	53599831	53599831	8553170	2	352,374,	0,13821,
#Deleted in new
chr14	53612723	53613405	chr14:53612723-53613405	7	+	53612723	53612723	16724991	1	682,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	53765654	53883740	chr14:53765654-53883740	1	+	53765654	53765654	8553170	3	65,152,560,	0,108849,117526,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	53768941	53850882	chr14:53768941-53850882	3	-	53768941	53768941	8553170	4	22,143,249,188,	0,24312,80780,81753,
#Deleted in new
chr14	53917269	53917753	chr14:53917269-53917753	7	-	53917269	53917269	16724991	1	484,	0,
#Deleted in new
chr14	53948426	53948484	chr14:53948426-53948484	3	-	53948426	53948426	5263520	1	58,	0,
#Deleted in new
chr14	53949735	53956811	chr14:53949735-53956811	1	-	53950031	53952222	789624	4	1153,377,125,262,	0,2117,3540,6814,
#Deleted in new
chr14	53949735	53956811	chr14:53949735-53956811	3	-	53950031	53952222	789624	4	1153,377,125,53,	0,2117,3540,7023,
#Deleted in new
chr14	53949738	53954552	chr14:53949738-53954552	1	-	53950031	53952222	789624	4	1150,377,125,132,	0,2114,3537,4682,
#Deleted in new
chr14	53949740	53953455	chr14:53949740-53953455	1	-	53950031	53952222	789624	3	1148,377,180,	0,2112,3535,
#Deleted in new
chr14	53950254	53953429	chr14:53950254-53953429	0	-	53950254	53952033	789624	3	634,324,154,	0,1598,3021,
#Deleted in new
chr14	53950621	53952147	chr14:53950621-53952147	0	-	53950801	53952147	789624	2	200,295,	0,1231,
#Deleted in new
chr14	53951422	53951880	chr14:53951422-53951880	0	-	53951790	53951880	789624	1	458,	0,
#Deleted in new
chr14	53951891	53958761	chr14:53951891-53958761	0	-	53951891	53952222	789624	3	338,125,42,	0,1384,6828,
#Deleted in new
chr14	53955465	53956648	chr14:53955465-53956648	0	-	53955465	53955465	8553170	2	506,99,	0,1084,
#Partially deleted in new
chr14	53991100	53991995	chr14:53991100-53991995	7	-	53991100	53991100	16724991	1	895,	0,
#Partially deleted in new
chr14	54396848	54417951	chr14:54396848-54417951	0	+	54396848	54396848	8553170	6	229,56,45,223,32,104,	0,4675,11896,14635,19050,20999,
#Partially deleted in new
chr14	54396954	54420218	chr14:54396954-54420218	3	+	54397068	54420078	0	8	123,83,56,45,223,32,104,227,	0,2939,4569,11790,14529,18944,20893,23037,
#Partially deleted in new
chr14	54396954	54420214	chr14:54396954-54420214	1	+	54397068	54420078	789624	9	123,83,56,45,202,6,32,104,223,	0,2939,4569,11790,14529,15880,18944,20893,23037,
#Partially deleted in new
chr14	54396978	54417951	chr14:54396978-54417951	1	+	54397068	54417878	789624	6	99,83,56,45,223,104,	0,2915,4545,11766,14505,20869,
#Partially deleted in new
chr14	54396994	54420212	chr14:54396994-54420212	1	+	54397068	54420078	0	7	83,19,45,223,32,104,221,	0,2899,11750,14489,18904,20853,22997,
#Partially deleted in new
chr14	54396999	54420218	chr14:54396999-54420218	1	+	54397068	54420078	789624	8	78,83,56,45,223,32,101,227,	0,2894,4524,11745,14484,18899,20851,22992,
#Partially deleted in new
chr14	54397002	54420218	chr14:54397002-54420218	1	+	54397068	54418273	789624	9	75,83,56,45,223,32,104,93,227,	0,2891,4521,11742,14481,18896,20845,21211,22989,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	54397028	54414219	chr14:54397028-54414219	1	+	54397068	54413630	789624	6	49,83,56,45,223,614,	0,2865,4495,11716,14455,16577,
#Partially deleted in new
chr14	54399887	54420116	chr14:54399887-54420116	1	+	54399887	54420028	789624	3	89,9,98,	0,1636,20131,
#Partially deleted in new
chr14	54399888	54420116	chr14:54399888-54420116	0	+	54399888	54399888	8553170	4	88,56,104,125,	0,1635,17959,20103,
#Partially deleted in new
chr14	54399925	54418414	chr14:54399925-54418414	0	+	54399925	54399925	8553170	7	51,56,45,223,32,104,201,	0,1598,8819,11558,15973,17922,18288,
#Partially deleted in new
chr14	54408563	54420214	chr14:54408563-54420214	1	+	54408563	54420078	789624	6	10,45,223,32,104,223,	0,181,2920,7335,9284,11428,
#Partially deleted in new
chr14	54423559	54441431	chr14:54423559-54441431	3	-	54427813	54441327	789624	5	4282,144,113,69,185,	0,6701,8548,12809,17687,
#Partially deleted in new
chr14	54426935	54441391	chr14:54426935-54441391	1	-	54427813	54441327	789624	4	906,113,69,145,	0,5172,9433,14311,
#Partially deleted in new
chr14	54427328	54441376	chr14:54427328-54441376	0	-	54430392	54441327	789624	4	513,144,69,130,	0,2932,9040,13918,
#Partially deleted in new
chr14	54427424	54441357	chr14:54427424-54441357	1	-	54427813	54441327	789624	4	417,144,113,111,	0,2836,4683,13822,
#Partially deleted in new
chr14	54427522	54441391	chr14:54427522-54441391	1	-	54427813	54441327	789624	6	319,144,113,48,69,145,	0,2738,4585,8556,8846,13724,
#Partially deleted in new
chr14	54427594	54441344	chr14:54427594-54441344	0	-	54436764	54441327	789624	6	247,144,113,69,116,98,	0,2666,4513,8774,9075,13652,
#Partially deleted in new
chr14	54430157	54441340	chr14:54430157-54441340	1	-	54430256	54441327	789624	4	247,113,69,94,	0,1950,6211,11089,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	54470708	54471218	chr14:54470708-54471218	3	+	54470708	54470708	8553170	2	189,196,	0,314,
#Partially deleted in new
chr14	54474483	54489025	chr14:54474483-54489025	1	-	54481441	54488927	789624	4	6473,50,97,101,	0,6925,9187,14441,
#Partially deleted in new
chr14	54474484	54489196	chr14:54474484-54489196	3	-	54478087	54488927	789624	7	3675,74,83,50,50,97,272,	0,5301,6389,6924,7668,9186,14440,
#Partially deleted in new
chr14	54474490	54489026	chr14:54474490-54489026	1	-	54478087	54488927	789624	7	3669,74,82,51,50,97,102,	0,5295,6383,6917,7662,9180,14434,
#Partially deleted in new
chr14	54477857	54488957	chr14:54477857-54488957	1	-	54481441	54488927	789624	6	302,74,83,50,97,33,	0,1928,3016,3551,5813,11067,
#Deleted in new
chr14	54477921	54483768	chr14:54477921-54483768	0	-	54477921	54477921	8553170	6	238,74,89,133,50,98,	0,1864,2952,3404,4231,5749,
#Partially deleted in new
chr14	54477982	54488980	chr14:54477982-54488980	0	-	54481441	54488927	789624	6	177,74,68,133,97,56,	0,1803,2891,3343,5688,10942,
#Partially deleted in new
chr14	54478105	54488658	chr14:54478105-54488658	0	-	54478105	54483971	789624	8	54,74,86,50,50,97,128,52,	0,1680,2768,3303,4047,5565,5827,10501,
#Partially deleted in new
chr14	54481394	54488861	chr14:54481394-54488861	0	-	54481394	54481394	8553170	4	64,50,97,180,	0,758,2276,7287,
#Partially deleted in new
chr14	54481394	54488980	chr14:54481394-54488980	0	-	54481394	54481394	8553170	4	64,81,97,56,	0,727,2276,7530,
#Partially deleted in new
chr14	54483127	54488994	chr14:54483127-54488994	0	-	54483127	54483127	8553170	2	640,70,	0,5797,
#Partially deleted in new
chr14	54509811	54538281	chr14:54509811-54538281	0	+	54509959	54537753	789624	4	252,140,108,219,	0,12642,27910,28251,
#Partially deleted in new
chr14	54509827	54539309	chr14:54509827-54539309	3	+	54509959	54538383	0	6	236,140,178,148,108,1247,	0,12626,20221,21075,27894,28235,
#Partially deleted in new
chr14	54509901	54538616	chr14:54509901-54538616	0	+	54509901	54509901	8553170	6	162,140,715,148,108,554,	0,12552,20147,21001,27820,28161,
#Partially deleted in new
chr14	54509911	54538098	chr14:54509911-54538098	0	+	54509959	54530079	789624	5	152,178,148,108,36,	0,20137,20991,27810,28151,
#Partially deleted in new
chr14	54510125	54538247	chr14:54510125-54538247	0	+	54510125	54510125	8553170	6	142,140,178,148,108,185,	0,12328,19923,20777,27596,27937,
#Partially deleted in new
chr14	54510184	54531117	chr14:54510184-54531117	0	+	54510184	54510184	8553170	4	83,140,178,215,	0,12269,19864,20718,
#Deleted in new
chr14	54536072	54538614	chr14:54536072-54538614	0	+	54536072	54536072	8553170	2	1757,552,	0,1990,
#Deleted in new
chr14	54537721	54538614	chr14:54537721-54538614	0	+	54537721	54538231	789624	2	108,497,	0,396,
#Partially deleted in new
chr14	54567096	54789127	chr14:54567096-54789127	1	+	54567916	54788944	789624	13	242,617,519,264,110,87,334,86,119,202,127,84,212,	0,399,134965,169927,181718,184354,193064,197358,203007,207837,209317,217440,221819,
#Partially deleted in new
chr14	54567611	54793311	chr14:54567611-54793311	1	+	54567916	54788944	789624	11	501,519,110,87,334,86,119,202,127,84,4396,	0,134450,181203,183839,192549,196843,202492,207322,208802,216925,221304,
#Partially deleted in new
chr14	54567611	54793315	chr14:54567611-54793315	3	+	54567916	54788944	789624	12	501,519,264,110,87,334,86,119,202,127,84,4400,	0,134450,169412,181203,183839,192549,196843,202492,207322,208802,216925,221304,
#Partially deleted in new
chr14	54567611	54793315	chr14:54567611-54793315	1	+	54760211	54788944	789624	12	501,519,110,87,334,86,119,202,127,108,84,4400,	0,134450,181203,183839,192549,196843,202492,207322,208802,216728,216925,221304,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	54567631	54703867	chr14:54567631-54703867	0	+	54567631	54567631	8553170	2	481,1806,	0,134430,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	54652682	54702396	chr14:54652682-54702396	0	+	54652682	54652682	8553170	3	158,54,335,	0,16109,49379,
#Partially deleted in new
chr14	54684752	54687912	chr14:54684752-54687912	3	-	54684752	54684752	8553170	3	249,139,613,	0,984,2547,
#Partially deleted in new
chr14	54687996	54702876	chr14:54687996-54702876	0	+	54687996	54687996	8553170	2	304,815,	0,14065,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	54688019	54735137	chr14:54688019-54735137	0	+	54688019	54688019	8553170	7	281,433,1975,113,118,519,198,	0,1605,4932,8824,13004,14042,46920,
#Partially deleted in new
chr14	54688020	54692986	chr14:54688020-54692986	0	+	54688020	54688020	8553170	3	280,312,35,	0,1725,4931,
#Partially deleted in new
chr14	54754832	54789127	chr14:54754832-54789127	1	+	54760211	54788944	789624	9	65,334,86,119,202,127,108,84,212,	0,5328,9622,15271,20101,21581,29507,29704,34083,
#Partially deleted in new
chr14	54774961	54789128	chr14:54774961-54789128	0	+	54774961	54774961	8553170	4	174,127,281,213,	0,1452,9378,13954,
#Partially deleted in new
chr14	54776410	54789127	chr14:54776410-54789127	0	+	54776410	54776410	8553170	4	130,42,84,212,	0,7929,8126,12505,
#Partially deleted in new
chr14	54784265	54789128	chr14:54784265-54789128	0	+	54784265	54784265	8553170	3	116,84,213,	0,271,4650,
#Partially deleted in new
chr14	54842007	54902824	chr14:54842007-54902824	1	-	54844016	54902663	0	7	1047,143,85,32,56,110,504,	0,1993,3760,5091,17673,23319,60313,
#Partially deleted in new
chr14	54842007	54902824	chr14:54842007-54902824	1	-	54844016	54902663	0	6	2136,85,32,56,110,504,	0,3760,5091,17673,23319,60313,
#Partially deleted in new
chr14	54842015	54902852	chr14:54842015-54902852	3	-	54844016	54902663	0	6	2128,85,32,56,110,532,	0,3752,5083,17665,23311,60305,
#Partially deleted in new
chr14	54842015	54902807	chr14:54842015-54902807	1	-	54843793	54902663	0	7	1039,88,85,32,56,110,487,	0,1766,3752,5083,17665,23311,60305,
#Partially deleted in new
chr14	54842016	54902811	chr14:54842016-54902811	0	-	54842016	54842016	8553170	6	2127,85,32,56,110,491,	0,3751,5082,17664,23310,60304,
#Partially deleted in new
chr14	54842028	54902816	chr14:54842028-54902816	1	-	54843038	54902663	0	6	1026,85,32,56,110,496,	0,3739,5070,17652,23298,60292,
#Partially deleted in new
chr14	54842995	54902446	chr14:54842995-54902446	0	-	54842995	54842995	8553170	4	59,56,110,126,	0,16685,22331,59325,
#Deleted in new
chr14	54859214	54859330	chr14:54859214-54859330	3	+	54859214	54859214	8553170	1	116,	0,
#Deleted in new
chr14	54878112	54878193	chr14:54878112-54878193	3	-	54878112	54878112	5263520	1	81,	0,
#Partially deleted in new
chr14	54884848	54886213	chr14:54884848-54886213	7	-	54884848	54884848	16724991	2	751,262,	0,1103,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr14	54938949	55027077	chr14:54938949-55027077	3	-	54941489	55026787	0	26	2741,139,134,171,44,54,116,221,132,115,157,138,242,185,188,211,142,107,93,96,51,112,152,112,93,50,	0,5382,16611,18084,18642,23548,23788,24002,27525,28330,42590,45773,48196,50078,52263,56653,61553,61936,63143,68330,69366,69658,71359,74535,87761,88078,
#Partially deleted in new
chr14	54941158	55027105	chr14:54941158-55027105	1	-	54941489	55008691	0	25	532,139,134,171,44,54,116,221,132,115,157,138,242,185,188,211,142,107,93,96,51,112,152,112,78,	0,3173,14402,15875,16433,21339,21579,21793,25316,26121,40381,43564,45987,47869,50054,54444,59344,59727,60934,66121,67157,67449,69150,72326,85869,
#Partially deleted in new
chr14	54941175	54991382	chr14:54941175-54991382	0	-	54987363	54991382	789624	14	515,139,134,171,44,54,116,221,132,115,157,138,242,170,	0,3156,14385,15858,16416,21322,21562,21776,25299,26104,40364,43547,45970,50037,
#Partially deleted in new
chr14	54941270	54944607	chr14:54941270-54944607	0	-	54941270	54941270	8553170	2	420,276,	0,3061,
#Partially deleted in new
chr14	55004812	55005687	chr14:55004812-55005687	7	-	55004812	55004812	16724991	1	875,	0,
#Partially deleted in new
chr14	55008315	55027051	chr14:55008315-55027051	0	-	55008315	55026787	789624	5	51,112,152,112,341,	0,292,1993,5169,18395,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	55027229	55049488	chr14:55027229-55049488	3	+	55043041	55044364	0	2	242,6537,	0,15722,
#Partially deleted in new
chr14	55027247	55046708	chr14:55027247-55046708	1	+	55043041	55044364	0	3	224,129,3757,	0,4615,15704,
#Partially deleted in new
chr14	55027280	55031994	chr14:55027280-55031994	0	+	55027280	55027280	8553170	2	191,106,	0,4608,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	55027626	55049486	chr14:55027626-55049486	1	+	55043041	55044364	0	2	132,6535,	0,15325,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	55051630	55070192	chr14:55051630-55070192	3	+	55061683	55064627	789624	4	173,22,708,5577,	0,10049,10987,12985,
#Partially deleted in new
chr14	55051646	55063025	chr14:55051646-55063025	0	+	55051646	55051646	8553170	2	157,408,	0,10971,
#Partially deleted in new
chr14	55051682	55069502	chr14:55051682-55069502	1	+	55061683	55064627	789624	5	121,22,708,1591,394,	0,9997,10935,12933,17426,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	55051690	55060782	chr14:55051690-55060782	0	+	55051690	55051690	8553170	2	113,421,	0,8671,
#Partially deleted in new
chr14	55062950	55064670	chr14:55062950-55064670	0	+	55062950	55062950	8553170	3	375,87,55,	0,901,1665,
#Partially deleted in new
chr14	55124109	55138292	chr14:55124109-55138292	0	+	55137373	55138292	789624	3	49,22,248,	0,13260,13935,
#Partially deleted in new
chr14	55129043	55145403	chr14:55129043-55145403	3	+	55137373	55145271	0	6	257,22,324,89,166,288,	0,8326,9001,11231,13540,16072,
#Partially deleted in new
chr14	55129255	55142755	chr14:55129255-55142755	0	+	55129255	55129255	8553170	4	45,324,89,172,	0,8789,11019,13328,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	55129259	55143721	chr14:55129259-55143721	1	+	55137373	55143552	789624	6	41,22,324,89,166,274,	0,8110,8785,11015,13324,14188,
#Partially deleted in new
chr14	55137187	55145413	chr14:55137187-55145413	0	+	55137187	55137187	789624	4	1181,89,166,298,	0,3087,5396,7928,
#Partially deleted in new
chr14	55137368	55142678	chr14:55137368-55142678	0	+	55137368	55137368	8553170	5	23,68,324,89,95,	0,258,676,2906,5215,
#Partially deleted in new
chr14	55138043	55140440	chr14:55138043-55140440	0	+	55138043	55138043	8553170	2	325,166,	0,2231,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr14	55148111	55191544	chr14:55148111-55191544	1	-	55148453	55189179	789624	20	362,91,50,247,58,190,220,105,161,86,127,125,275,71,123,85,63,194,239,82,	0,482,2687,3583,4478,6505,10410,14859,21287,22590,27234,27782,28950,31517,32544,33101,34258,35448,40830,43351,
#Partially deleted in new
chr14	55148135	55191678	chr14:55148135-55191678	3	-	55148350	55189179	789624	19	338,50,247,58,190,220,105,161,86,127,125,275,71,123,85,63,194,239,216,	0,2663,3559,4454,6481,10386,14835,21263,22566,27210,27758,28926,31493,32520,33077,34234,35424,40806,43327,
#Partially deleted in new
chr14	55150327	55152644	chr14:55150327-55152644	0	-	55150327	55150327	8553170	3	521,247,55,	0,1367,2262,
#Partially deleted in new
chr14	55180655	55191172	chr14:55180655-55191172	0	-	55180655	55189179	789624	6	123,85,63,194,239,104,	0,557,1714,2904,8286,10413,
#Partially deleted in new
chr14	55183605	55191608	chr14:55183605-55191608	0	-	55183658	55189179	789624	4	148,239,108,146,	0,5336,7463,7857,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	55196726	55199013	chr14:55196726-55199013	3	-	55196726	55196726	8553170	2	402,166,	0,2121,
#Partially deleted in new
chr14	55229216	55229681	chr14:55229216-55229681	7	+	55229216	55229216	16724991	1	465,	0,
#Partially deleted in new
chr14	55240621	55241080	chr14:55240621-55241080	7	-	55240621	55240621	16724991	1	459,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	55262766	55271308	chr14:55262766-55271308	3	-	55262766	55262766	8553170	2	390,164,	0,8378,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	55262907	55272075	chr14:55262907-55272075	0	-	55262907	55262907	8553170	2	249,194,	0,8974,
#Partially deleted in new
chr14	55271302	55353609	chr14:55271302-55353609	3	+	55350390	55352526	789624	2	235,3229,	0,79078,
#Partially deleted in new
chr14	55271422	55350864	chr14:55271422-55350864	0	+	55271422	55271422	8553170	2	115,462,	0,78980,
#Partially deleted in new
chr14	55272153	55353083	chr14:55272153-55353083	1	+	55350390	55352526	789624	2	128,2703,	0,78227,
#Partially deleted in new
chr14	55272153	55350840	chr14:55272153-55350840	0	+	55272153	55272153	8553170	2	152,460,	0,78227,
#Partially deleted in new
chr14	55272210	55355084	chr14:55272210-55355084	0	+	55272210	55272210	8553170	5	71,87,170,85,21,	0,45972,78170,82290,82853,
#Deleted in new
chr14	55282295	55282643	chr14:55282295-55282643	7	-	55282295	55282295	16724991	1	348,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	55285226	55285558	chr14:55285226-55285558	3	+	55285226	55285226	8553170	1	332,	0,
#Deleted in new
chr14	55298643	55299231	chr14:55298643-55299231	7	+	55298643	55298643	16724991	1	588,	0,
#Partially deleted in new
chr14	55325833	55339501	chr14:55325833-55339501	3	-	55325833	55325833	8553170	3	197,99,67,	0,9474,13601,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	55350788	55361918	chr14:55350788-55361918	0	+	55350792	55352526	789624	4	2082,85,159,186,	0,3712,4275,10944,
#Duplicated in new
chr14	55366391	55411858	chr14:55366391-55411858	3	-	55369618	55411822	789624	10	3534,86,91,118,230,238,82,43,63,257,	0,11427,11592,14181,15570,19467,24519,29548,30980,45210,
#Duplicated in new
chr14	55366391	55391302	chr14:55366391-55391302	0	-	55366391	55366391	8553170	7	3534,86,91,118,230,238,392,	0,11427,11592,14181,15570,19467,24519,
#Deleted in new
chr14	55394939	55395233	chr14:55394939-55395233	7	-	55394939	55394939	16724991	1	294,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	55413540	55440616	chr14:55413540-55440616	3	-	55414378	55440545	789624	7	915,95,168,92,88,458,221,	0,10618,15266,20089,22306,23020,26855,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	55413555	55414059	chr14:55413555-55414059	7	-	55413555	55413555	16724991	1	504,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	55436897	55456726	chr14:55436897-55456726	0	-	55436897	55436964	789624	4	121,111,68,259,	0,1897,3498,19570,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	55499277	55580092	chr14:55499277-55580092	0	-	55499277	55499277	8553170	4	216,75,132,157,	0,61811,79328,80658,
#Deleted in new
chr14	55543400	55544169	chr14:55543400-55544169	7	+	55543400	55543400	16724991	1	769,	0,
#Partially deleted in new
chr14	55546673	55548123	chr14:55546673-55548123	7	+	55546673	55546673	16724991	2	465,655,	0,795,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	55557971	55580110	chr14:55557971-55580110	3	-	55557971	55557971	8553170	4	1803,75,132,175,	0,3117,20634,21964,
#Partially deleted in new
chr14	55559071	55612230	chr14:55559071-55612230	0	+	55612048	55612230	789624	2	79,212,	0,52947,
#Partially deleted in new
chr14	55576185	55580074	chr14:55576185-55580074	1	-	55576185	55576185	789624	3	1194,132,139,	0,2420,3750,
#Partially deleted in new
chr14	55576186	55580096	chr14:55576186-55580096	0	-	55576186	55576186	8553170	2	1193,161,	0,3749,
#Partially deleted in new
chr14	55580209	55637341	chr14:55580209-55637341	0	+	55637298	55637341	789624	6	145,117,107,129,88,144,	0,47702,53025,54320,56239,56988,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	55580253	55612273	chr14:55580253-55612273	0	+	55612048	55612273	789624	4	101,124,115,255,	0,21503,27092,31765,
#Partially deleted in new
chr14	55580314	55684579	chr14:55580314-55684579	1	+	55612048	55684103	789624	42	40,553,138,171,131,117,141,107,133,88,167,69,38,91,69,38,82,69,35,91,69,38,91,69,38,91,69,38,91,69,38,91,90,81,90,93,72,84,84,93,121,481,	0,31704,36202,37649,38867,47597,49642,52920,54211,56134,56883,57464,58870,59598,60059,60618,60812,61377,66658,67710,68487,69461,70013,70254,71575,72535,72702,73244,75727,78231,79351,81207,86926,90414,91251,91470,92315,92614,95520,98037,99250,103784,
#Partially deleted in new
chr14	55580316	55684579	chr14:55580316-55684579	3	+	55612048	55684103	789624	44	38,553,138,171,131,117,141,107,133,88,167,69,38,91,69,38,82,69,35,91,69,38,91,69,38,91,69,38,91,69,38,91,87,90,81,90,93,72,84,84,84,93,121,481,	0,31702,36200,37647,38865,47595,49640,52918,54209,56132,56881,57462,58868,59596,60057,60616,60810,61375,66656,67708,68485,69459,70011,70252,71573,72533,72700,73242,75725,78229,79349,81205,83638,86924,90412,91249,91468,92313,92612,92855,95518,98035,99248,103782,
#Boundary problem: need 46, got 0, diff 46, mapped 0.0
chr14	55580321	55684579	chr14:55580321-55684579	0	+	55612048	55680690	789624	46	33,124,553,138,171,131,117,141,107,133,88,167,69,38,91,69,38,82,69,35,91,69,38,91,69,38,91,69,38,91,69,38,91,87,90,81,90,93,72,84,84,84,93,121,56,481,	0,21435,31697,36195,37642,38860,47590,49635,52913,54204,56127,56876,57457,58863,59591,60052,60611,60805,61370,66651,67703,68480,69454,70006,70247,71568,72528,72695,73237,75720,78224,79344,81200,83633,86919,90407,91244,91463,92308,92607,92850,95513,98030,99243,100364,103777,
#Boundary problem: need 43, got 0, diff 43, mapped 0.0
chr14	55580323	55680718	chr14:55580323-55680718	1	+	55612048	55680690	789624	43	31,124,553,138,171,131,117,141,107,133,88,167,69,38,91,69,38,82,69,35,91,69,38,91,38,91,69,38,91,69,38,91,87,90,81,90,93,72,84,84,93,121,33,	0,21433,31695,36193,37640,38858,47588,49633,52911,54202,56125,56874,57455,58861,59589,60050,60609,60803,61368,66649,67701,68478,69452,70004,71566,72526,72693,73235,75718,78222,79342,81198,83631,86917,90405,91242,91461,92306,92605,95511,98028,99241,100362,
#Partially deleted in new
chr14	55611976	55680718	chr14:55611976-55680718	1	+	55612048	55680690	789624	41	595,138,171,131,117,141,107,133,88,167,69,38,91,69,38,82,69,35,91,69,38,91,38,91,69,38,91,69,38,91,87,90,81,90,93,72,84,84,93,121,33,	0,4540,5987,7205,15935,17980,21258,22549,24472,25221,25802,27208,27936,28397,28956,29150,29715,34996,36048,36825,37799,38351,39913,40873,41040,41582,44065,46569,47689,49545,51978,55264,58752,59589,59808,60653,60952,63858,66375,67588,68709,
#Partially deleted in new
chr14	55611976	55684583	chr14:55611976-55684583	1	+	55612048	55684103	789624	41	595,138,171,131,117,141,107,133,88,167,69,38,91,69,38,82,69,35,91,69,38,91,38,91,69,38,91,69,38,91,87,90,81,90,93,72,84,84,93,121,485,	0,4540,5987,7205,15935,17980,21258,22549,24472,25221,25802,27208,27936,28397,28956,29150,29715,34996,36048,36825,37799,38351,39913,40873,41040,41582,44065,46569,47689,49545,51978,55264,58752,59589,59808,60653,60952,63858,66375,67588,72122,
#Partially deleted in new
chr14	55641748	55661586	chr14:55641748-55661586	0	+	55641748	55651343	789624	16	12,35,91,69,38,91,69,89,38,91,69,38,91,69,38,65,	0,5224,6276,7053,8027,8579,8820,9538,10141,11101,11268,11810,14293,16797,17917,19773,
#Partially deleted in new
chr14	55644274	55684260	chr14:55644274-55684260	1	+	55644386	55684103	789624	25	169,35,91,69,38,91,69,38,91,69,38,91,69,38,91,90,81,90,93,72,84,84,93,121,162,	0,2698,3750,4527,5501,6053,6294,7615,8575,8742,9284,11767,14271,15391,17247,22966,26454,27291,27510,28355,28654,31560,34077,35290,39824,
#Partially deleted in new
chr14	55644285	55652875	chr14:55644285-55652875	0	+	55644386	55652875	789624	9	158,35,64,69,38,91,69,38,26,	0,2687,3739,4516,5490,6042,6283,7604,8564,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	55651533	55651634	chr14:55651533-55651634	3	+	55651533	55651533	8553170	1	101,	0,
#Partially deleted in new
chr14	55651889	55656347	chr14:55651889-55656347	0	+	55651889	55651889	8553170	5	38,91,69,38,306,	0,960,1127,1669,4152,
#Partially deleted in new
chr14	55656099	55661857	chr14:55656099-55661857	0	+	55656099	55656099	8553170	4	33,69,38,336,	0,2446,3566,5422,
#Partially deleted in new
chr14	55656101	55663196	chr14:55656101-55663196	0	+	55656101	55662949	789624	5	31,69,38,91,292,	0,2444,3564,5420,6803,
#Partially deleted in new
chr14	55661248	55672697	chr14:55661248-55672697	0	+	55663981	55672697	789624	8	131,91,87,90,81,90,93,68,	0,273,2706,5992,9480,10317,10536,11381,
#Partially deleted in new
chr14	55661273	55684576	chr14:55661273-55684576	1	+	55661507	55684103	789624	12	339,87,90,81,90,93,72,84,84,93,121,478,	0,2681,5967,9455,10292,10511,11356,11655,14561,17078,18291,22825,
#Partially deleted in new
chr14	55663342	55684576	chr14:55663342-55684576	0	+	55663342	55663342	8553170	11	699,90,81,90,93,72,84,84,93,121,478,	0,3898,7386,8223,8442,9287,9586,12492,15009,16222,20756,
#Partially deleted in new
chr14	55667650	55684583	chr14:55667650-55684583	0	+	55667650	55667650	8553170	9	1153,81,312,72,84,84,93,121,485,	0,3078,3915,4979,5278,8184,10701,11914,16448,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	55671314	55684579	chr14:55671314-55684579	0	+	55671314	55671314	8553170	4	4604,93,121,481,	0,7037,8250,12784,
#Partially deleted in new
chr14	55671861	55674304	chr14:55671861-55674304	0	+	55671861	55671861	8553170	3	16,72,1376,	0,768,1067,
#Partially deleted in new
chr14	55672929	55701526	chr14:55672929-55701526	0	+	55672929	55701378	789624	5	83,84,93,121,183,	0,2905,5422,6635,28414,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	55675049	55683723	chr14:55675049-55683723	0	+	55675049	55675049	8553170	2	869,5372,	0,3302,
#Deleted in new
chr14	55679662	55684253	chr14:55679662-55684253	0	+	55679662	55680690	789624	3	23,77,155,	0,1002,4436,
#Partially deleted in new
chr14	55748207	55773203	chr14:55748207-55773203	3	+	55748207	55748207	8553170	4	75,75,94,215,	0,23423,24548,24781,
#Deleted in new
chr14	55766176	55766790	chr14:55766176-55766790	5	+	55766176	55766176	16724991	1	614,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	55766244	55767717	chr14:55766244-55767717	7	+	55766244	55766244	16724991	1	1473,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	55787664	55793429	chr14:55787664-55793429	0	-	55787664	55787664	8553170	2	712,62,	0,5703,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	55787926	55793360	chr14:55787926-55793360	0	-	55787926	55787926	8553170	2	450,64,	0,5370,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	55792726	55796639	chr14:55792726-55796639	0	-	55792726	55792726	8553170	3	730,62,37,	0,1557,3876,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	55896546	55962970	chr14:55896546-55962970	3	+	55896546	55896546	8553170	7	43,173,136,205,107,106,146,	0,47093,60608,61415,65434,65625,66278,
#Deleted in new
chr14	55915726	55916326	chr14:55915726-55916326	1	+	55915726	55915726	8553170	1	600,	0,
#Deleted in new
chr14	56117315	56117990	chr14:56117315-56117990	3	-	56117315	56117315	8553170	1	675,	0,
#Partially deleted in new
chr14	56117813	56290344	chr14:56117813-56290344	0	+	56279768	56290344	789624	5	267,130,102,198,77,	0,60521,161862,170623,172454,
#Partially deleted in new
chr14	56118374	56301526	chr14:56118374-56301526	3	+	56118660	56297166	0	6	363,130,102,198,189,4927,	0,59960,161301,170062,171893,178225,
#Partially deleted in new
chr14	56119108	56290293	chr14:56119108-56290293	0	+	56279768	56290293	789624	5	102,130,102,198,26,	0,59226,160567,169328,171159,
#Partially deleted in new
chr14	56303489	56310761	chr14:56303489-56310761	3	-	56303489	56303489	8553170	4	180,171,113,53,	0,5249,6611,7219,
#Deleted in new
chr14	56305837	56306394	chr14:56305837-56306394	3	+	56305837	56305837	8553170	1	557,	0,
#Partially deleted in new
chr14	56310879	56326208	chr14:56310879-56326208	1	+	56310879	56310879	8553170	4	223,195,126,29,	0,7012,10606,15300,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	56310935	56345001	chr14:56310935-56345001	3	+	56310935	56310935	8553170	5	167,126,179,66,28,	0,10550,17247,19486,34038,
#Partially deleted in new
chr14	56488353	56585902	chr14:56488353-56585902	0	+	56491532	56585902	789624	4	239,249,32,142,	0,2979,96647,97407,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	56514330	56551309	chr14:56514330-56551309	3	+	56514330	56514330	789624	2	187,2039,	0,34940,
#Partially deleted in new
chr14	56579619	56649515	chr14:56579619-56649515	0	+	56603938	56625385	789624	15	54,32,152,178,114,180,41,84,115,170,149,177,54,91,2273,	0,5381,6141,24195,25950,29486,32625,36324,37563,38974,45762,53375,55279,56888,67623,
#Partially deleted in new
chr14	56579792	56649515	chr14:56579792-56649515	3	+	56579914	56647497	789624	16	282,32,152,178,114,180,41,84,115,170,172,149,177,54,91,2273,	0,5208,5968,24022,25777,29313,32452,36151,37390,38801,41738,45589,53202,55106,56715,67450,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	56579824	56613910	chr14:56579824-56613910	0	+	56579824	56579824	8553170	7	250,32,152,178,114,180,1666,	0,5176,5936,23990,25745,29281,32420,
#Partially deleted in new
chr14	56579825	56647852	chr14:56579825-56647852	0	+	56579914	56605573	789624	14	249,32,152,114,180,41,84,115,170,149,177,54,91,610,	0,5175,5935,25744,29280,32419,36118,37357,38768,45556,53169,55073,56682,67417,
#Partially deleted in new
chr14	56579825	56593224	chr14:56579825-56593224	0	+	56579825	56579825	8553170	4	249,32,152,110,	0,5175,5935,13289,
#Partially deleted in new
chr14	56579830	56616264	chr14:56579830-56616264	0	+	56579830	56579830	8553170	8	244,32,152,178,114,180,41,321,	0,5170,5930,23984,25739,29275,32414,36113,
#Partially deleted in new
chr14	56579840	56648094	chr14:56579840-56648094	0	+	56579914	56618627	789624	15	234,32,152,178,114,180,41,84,170,172,149,177,54,91,852,	0,5160,5920,23974,25729,29265,32404,36103,38753,41690,45541,53154,55058,56667,67402,
#Partially deleted in new
chr14	56579883	56634953	chr14:56579883-56634953	1	+	56579914	56625385	789624	13	191,32,152,178,114,180,41,84,115,170,149,177,55,	0,5117,5877,23931,25686,29222,32361,36060,37299,38710,45498,53111,55015,
#Partially deleted in new
chr14	56585692	56609189	chr14:56585692-56609189	0	+	56585692	56585692	8553170	4	220,178,114,84,	0,18122,19877,23413,
#Partially deleted in new
chr14	56585693	56603941	chr14:56585693-56603941	0	+	56585693	56585693	8553170	3	219,203,127,	0,7421,18121,
#Partially deleted in new
chr14	56585854	56618663	chr14:56585854-56618663	0	+	56585854	56605573	789624	6	58,114,180,41,84,70,	0,19715,23251,26390,30089,32739,
#Partially deleted in new
chr14	56609140	56633171	chr14:56609140-56633171	0	+	56609140	56618627	789624	6	145,41,84,170,149,177,	0,3104,6803,9453,16241,23854,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	56609244	56619466	chr14:56609244-56619466	0	+	56609244	56609244	8553170	6	41,41,84,115,170,109,	0,3000,6699,7938,9349,10113,
#Partially deleted in new
chr14	56615450	56647922	chr14:56615450-56647922	0	+	56615450	56615450	8553170	8	577,115,170,149,177,54,91,680,	0,1732,3143,9931,17544,19448,21057,31792,
#Partially deleted in new
chr14	56633243	56647772	chr14:56633243-56647772	3	-	56633243	56633243	8553170	3	239,123,59,	0,4952,14470,
#Partially deleted in new
chr14	56633248	56648658	chr14:56633248-56648658	0	-	56633248	56633248	8553170	3	234,123,40,	0,4947,15370,
#Partially deleted in new
chr14	56636515	56650606	chr14:56636515-56650606	0	+	56636515	56650113	789624	2	83,535,	0,13556,
#Partially deleted in new
chr14	56683420	56683741	chr14:56683420-56683741	7	-	56683420	56683420	16724991	1	321,	0,
#Partially deleted in new
chr14	56759378	56765757	chr14:56759378-56765757	3	+	56759378	56759378	8553170	2	187,620,	0,5759,
#Deleted in new
chr14	56799904	56810469	chr14:56799904-56810469	3	-	56801734	56805456	789624	5	2451,176,216,64,94,	0,4283,5455,10254,10471,
#Deleted in new
chr14	56801729	56805663	chr14:56801729-56805663	1	-	56801734	56805456	789624	3	626,152,304,	0,2458,3630,
#Deleted in new
chr14	56801734	56810448	chr14:56801734-56810448	1	-	56801734	56805456	789624	4	621,152,216,290,	0,2453,3625,8424,
#Deleted in new
chr14	56801809	56805648	chr14:56801809-56805648	1	-	56802344	56805456	789624	2	546,289,	0,3550,
#Deleted in new
chr14	56801912	56805648	chr14:56801912-56805648	0	-	56801912	56805456	789624	3	443,176,289,	0,2275,3447,
#Deleted in new
chr14	56802024	56810479	chr14:56802024-56810479	1	-	56802344	56805456	789624	4	331,216,64,104,	0,3335,8134,8351,
#Deleted in new
chr14	56802114	56810479	chr14:56802114-56810479	0	-	56802114	56805456	789624	6	241,152,216,20,64,104,	0,2073,3245,4589,8044,8261,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	56813182	56930833	chr14:56813182-56930833	3	+	56813182	56813182	789624	4	287,109,78,1954,	0,84357,85085,115697,
#Partially deleted in new
chr14	56813232	56919792	chr14:56813232-56919792	0	+	56813232	56813232	8553170	2	237,152,	0,106408,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	56813270	57152177	chr14:56813270-57152177	0	+	56813270	56813270	8553170	4	199,145,109,134,	0,138106,328723,338773,
#Partially deleted in new
chr14	56813290	56929039	chr14:56813290-56929039	0	+	56813290	56813290	8553170	4	179,52,150,160,	0,106350,114278,115589,
#Partially deleted in new
chr14	56817569	56893348	chr14:56817569-56893348	1	-	56817569	56817569	8553170	3	318,62,241,	0,63824,75538,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	56817753	56893710	chr14:56817753-56893710	3	-	56817753	56817753	8553170	2	134,603,	0,75354,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	56824374	56824656	chr14:56824374-56824656	3	-	56824374	56824374	8553170	1	282,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	56824985	56825092	chr14:56824985-56825092	3	+	56824985	56824985	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	56880817	56893159	chr14:56880817-56893159	0	-	56880817	56880817	8553170	2	638,52,	0,12290,
#Deleted in new
chr14	56885670	56893249	chr14:56885670-56893249	1	-	56885670	56885670	8553170	3	380,312,142,	0,1876,7437,
#Partially deleted in new
chr14	56978408	56979621	chr14:56978408-56979621	7	+	56978408	56978408	16724991	1	1213,	0,
#Deleted in new
chr14	57040884	57042504	chr14:57040884-57042504	7	+	57040884	57040884	16724991	1	1620,	0,
#Deleted in new
chr14	57044645	57044960	chr14:57044645-57044960	7	-	57044645	57044645	16724991	1	315,	0,
#Deleted in new
chr14	57066259	57068542	chr14:57066259-57068542	1	-	57066259	57066259	8553170	3	909,32,170,	0,1815,2113,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	57067007	57112660	chr14:57067007-57112660	3	-	57067007	57067007	8553170	2	158,466,	0,45187,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr14	57200506	57269008	chr14:57200506-57269008	3	-	57208608	57268648	789624	18	8291,216,109,87,121,109,148,210,83,141,45,110,29,65,195,148,95,387,	0,9060,9446,17475,18815,21801,29227,30999,32160,33236,33481,35204,36831,39088,43658,46204,47111,68115,
#Partially deleted in new
chr14	57206793	57232372	chr14:57206793-57232372	0	-	57206793	57206793	8553170	8	2004,216,109,87,121,109,148,867,	0,2773,3159,11188,12528,15514,22940,24712,
#Partially deleted in new
chr14	57208159	57268899	chr14:57208159-57268899	1	-	57208608	57268648	789624	17	638,216,109,87,121,109,148,210,83,141,45,110,29,65,148,95,278,	0,1407,1793,9822,11162,14148,21574,23346,24507,25583,25828,27551,29178,31435,38551,39458,60462,
#Partially deleted in new
chr14	57208544	57268837	chr14:57208544-57268837	0	-	57246814	57268648	789624	18	253,216,109,87,121,109,148,210,83,141,45,110,29,65,195,117,95,216,	0,1022,1408,9437,10777,13763,21189,22961,24122,25198,25443,27166,28793,31050,35620,38166,39073,60077,
#Partially deleted in new
chr14	57231570	57237506	chr14:57231570-57237506	0	-	57231570	57231570	8553170	6	145,83,141,45,110,169,	0,1096,2172,2417,4140,5767,
#Deleted in new
chr14	57232139	57233223	chr14:57232139-57233223	0	-	57232139	57232139	8553170	2	76,557,	0,527,
#Partially deleted in new
chr14	57239527	57268823	chr14:57239527-57268823	0	-	57239527	57239527	8553170	5	132,195,148,95,202,	0,4637,7183,8090,29094,
#Partially deleted in new
chr14	57243247	57247643	chr14:57243247-57247643	0	-	57243247	57243247	8553170	4	389,195,148,26,	0,917,3463,4370,
#Partially deleted in new
chr14	57244112	57268725	chr14:57244112-57268725	0	-	57244112	57244112	8553170	4	247,148,95,104,	0,2598,3505,24509,
#Partially deleted in new
chr14	57244278	57268440	chr14:57244278-57268440	0	-	57244278	57246815	789624	4	81,148,95,194,	0,2432,3339,23968,
#Partially deleted in new
chr14	57268908	57298742	chr14:57268908-57298742	3	+	57269314	57288884	789624	8	480,646,228,140,86,119,97,9941,	0,5335,11286,13180,14025,14203,17314,19893,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	57268923	57275469	chr14:57268923-57275469	0	+	57268923	57268923	8553170	2	465,1226,	0,5320,
#Partially deleted in new
chr14	57268939	57274723	chr14:57268939-57274723	0	+	57274478	57274723	789624	2	130,480,	0,5304,
#Partially deleted in new
chr14	57269025	57283019	chr14:57269025-57283019	0	+	57269314	57280237	789624	4	363,228,140,86,	0,11169,13063,13908,
#Partially deleted in new
chr14	57269055	57288925	chr14:57269055-57288925	1	+	57269314	57288884	789624	9	333,42,646,228,140,86,119,97,124,	0,4653,5188,11139,13033,13878,14056,17167,19746,
#Partially deleted in new
chr14	57269093	57271365	chr14:57269093-57271365	0	+	57269093	57269093	8553170	2	295,230,	0,2042,
#Partially deleted in new
chr14	57278421	57283243	chr14:57278421-57283243	0	+	57278421	57278421	8553170	5	187,228,140,86,132,	0,1773,3667,4512,4690,
#Partially deleted in new
chr14	57282984	57286564	chr14:57282984-57286564	0	+	57282984	57286348	789624	3	35,119,342,	0,127,3238,
#Partially deleted in new
chr14	57286222	57290074	chr14:57286222-57290074	0	+	57286222	57288884	789624	3	97,170,199,	0,2579,3653,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	57355445	57359410	chr14:57355445-57359410	3	+	57355445	57355445	8553170	1	3965,	0,
#Partially deleted in new
chr14	57390543	57410330	chr14:57390543-57410330	1	+	57396754	57409516	789624	4	162,124,56,952,	0,6208,9284,18835,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	57390552	57415917	chr14:57390552-57415917	3	+	57390957	57409516	789624	5	153,772,124,56,6539,	0,404,6199,9275,18826,
#Partially deleted in new
chr14	57390587	57409931	chr14:57390587-57409931	1	+	57396754	57409407	789624	3	118,124,553,	0,6164,18791,
#Partially deleted in new
chr14	57391300	57412746	chr14:57391300-57412746	0	+	57391300	57409516	789624	4	206,124,56,3368,	0,5451,8527,18078,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	57469300	57493852	chr14:57469300-57493852	3	-	57471354	57493715	789624	6	2290,160,102,87,83,360,	0,11294,12258,13764,21688,24192,
#Partially deleted in new
chr14	57471254	57493867	chr14:57471254-57493867	0	-	57490979	57493715	789624	6	336,160,99,87,130,375,	0,9340,10304,11810,19687,22238,
#Partially deleted in new
chr14	57471254	57493757	chr14:57471254-57493757	1	-	57471354	57493715	789624	6	336,160,99,87,83,265,	0,9340,10304,11810,19734,22238,
#Partially deleted in new
chr14	57471254	57493757	chr14:57471254-57493757	0	-	57491049	57493715	789624	6	336,160,99,87,130,245,	0,9340,10304,11810,19687,22258,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	57475313	57481590	chr14:57475313-57481590	0	-	57475486	57481590	789624	3	391,160,32,	0,5281,6245,
#Partially deleted in new
chr14	57478602	57493846	chr14:57478602-57493846	0	-	57490979	57493715	789624	6	379,160,99,120,130,354,	0,1992,2956,4462,12339,14890,
#Partially deleted in new
chr14	57478778	57493858	chr14:57478778-57493858	0	-	57491049	57493715	789624	6	247,160,99,87,83,346,	0,1816,2780,4286,12210,14734,
#Partially deleted in new
chr14	57478916	57483194	chr14:57478916-57483194	0	-	57478916	57478916	8553170	4	109,160,102,130,	0,1678,2642,4148,
#Deleted in new
chr14	57480722	57483300	chr14:57480722-57483300	0	-	57480722	57480722	8553170	3	32,99,236,	0,836,2342,
#Partially deleted in new
chr14	57483070	57493846	chr14:57483070-57493846	1	-	57490979	57493715	789624	3	114,130,354,	0,7871,10422,
#Partially deleted in new
chr14	57563921	57596897	chr14:57563921-57596897	1	-	57564134	57596897	789624	8	455,90,193,126,220,298,186,211,	0,2553,5866,7972,17292,25294,30017,32765,
#Partially deleted in new
chr14	57563921	57866062	chr14:57563921-57866062	3	-	57564134	57865825	789624	8	455,90,193,126,220,298,186,340,	0,2553,5866,7972,17292,25294,30017,301801,
#Partially deleted in new
chr14	57563977	57596897	chr14:57563977-57596897	1	-	57564134	57589433	789624	8	399,90,193,126,220,295,186,99,	0,2497,5810,7916,17236,25238,29961,32821,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	57564138	57596897	chr14:57564138-57596897	0	-	57580521	57589433	789624	10	238,90,193,122,89,101,220,298,186,1163,	0,2336,5649,7755,15287,16300,17075,25077,29800,31596,
#Partially deleted in new
chr14	57569862	57581335	chr14:57569862-57581335	0	-	57580521	57581335	789624	4	118,126,101,122,	0,2031,10576,11351,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	57578408	57600404	chr14:57578408-57600404	3	+	57578408	57578408	8553170	5	597,101,96,78,405,	0,2578,2832,3029,21591,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	57578631	57581320	chr14:57578631-57581320	0	+	57578631	57578631	8553170	2	374,334,	0,2355,
#Partially deleted in new
chr14	57594044	57799507	chr14:57594044-57799507	0	-	57594044	57594044	8553170	4	80,146,213,96,	0,8353,9998,205367,
#Partially deleted in new
chr14	57604007	57982194	chr14:57604007-57982194	0	-	57604007	57604007	8553170	2	248,282,	0,377905,
#Partially deleted in new
chr14	57629840	57631162	chr14:57629840-57631162	7	+	57629840	57629840	16724991	1	1322,	0,
#Partially deleted in new
chr14	57629925	57630688	chr14:57629925-57630688	5	+	57629925	57629925	16724991	1	763,	0,
#Partially deleted in new
chr14	57837353	57837660	chr14:57837353-57837660	3	-	57837353	57837353	8553170	1	307,	0,
#Partially deleted in new
chr14	57976750	57982063	chr14:57976750-57982063	0	-	57976750	57976750	8553170	2	207,151,	0,5162,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	57993544	57994525	chr14:57993544-57994525	3	-	57993544	57993544	8553170	1	981,	0,
#Partially deleted in new
chr14	57999734	58004024	chr14:57999734-58004024	0	-	57999734	57999734	8553170	2	115,118,	0,4172,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	58000760	58152213	chr14:58000760-58152213	3	-	58004735	58139358	789624	8	4044,135,32,258,210,252,1425,139,	0,4287,11358,95963,130751,132329,137229,151314,
#Deleted in new
chr14	58100984	58101574	chr14:58100984-58101574	7	+	58100984	58100984	16724991	1	590,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	58116115	58139241	chr14:58116115-58139241	0	-	58116115	58116115	8553170	4	392,210,252,894,	0,15396,16974,22232,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	58116123	58152183	chr14:58116123-58152183	0	-	58116123	58116123	8553170	5	384,210,252,1425,109,	0,15388,16966,21866,35951,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	58131206	58133131	chr14:58131206-58133131	0	-	58131470	58133131	789624	2	515,42,	0,1883,
#Partially deleted in new
chr14	58139100	58298139	chr14:58139100-58298139	0	-	58139100	58139100	8553170	3	314,73,185,	0,152534,158854,
#Deleted in new
chr14	58141278	58141660	chr14:58141278-58141660	7	+	58141278	58141278	16724991	1	382,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	58179770	58180064	chr14:58179770-58180064	3	+	58179770	58179770	8553170	1	294,	0,
#Partially deleted in new
chr14	58184575	58185507	chr14:58184575-58185507	7	+	58184575	58184575	16724991	2	101,204,	0,728,
#Partially deleted in new
chr14	58200079	58234760	chr14:58200079-58234760	0	+	58200217	58215243	789624	13	215,73,83,109,119,58,80,36,80,74,82,202,391,	0,2775,7856,8919,11212,13561,15125,19614,23542,23703,30319,31986,34290,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr14	58200137	58235636	chr14:58200137-58235636	3	+	58200217	58234551	789624	13	157,73,83,109,108,68,80,36,80,74,82,202,1267,	0,2717,7798,8861,11154,13493,15067,19556,23484,23645,30261,31928,34232,
#Partially deleted in new
chr14	58200141	58234755	chr14:58200141-58234755	0	+	58200217	58215243	789624	13	153,73,83,109,101,58,80,36,80,74,82,202,386,	0,2713,7794,8857,11150,13499,15063,19552,23480,23641,30257,31924,34228,
#Partially deleted in new
chr14	58200148	58232161	chr14:58200148-58232161	0	+	58200217	58215243	789624	8	146,73,83,109,80,36,82,96,	0,2706,7787,8850,15056,19545,30250,31917,
#Partially deleted in new
chr14	58200153	58223856	chr14:58200153-58223856	0	+	58200217	58207990	789624	7	141,83,109,80,36,80,74,	0,7782,8845,15051,19540,23468,23629,
#Partially deleted in new
chr14	58200169	58209257	chr14:58200169-58209257	0	+	58200169	58200169	8553170	4	125,73,83,259,	0,2685,7766,8829,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	58200210	58209107	chr14:58200210-58209107	0	+	58200217	58207171	789624	5	84,73,135,83,109,	0,2644,6838,7725,8788,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	58200218	58234768	chr14:58200218-58234768	0	+	58200218	58231118	789624	14	76,73,83,109,108,68,80,36,80,74,82,74,202,399,	0,2636,7717,8780,11073,13412,14986,19475,23403,23564,30180,30861,31847,34151,
#Partially deleted in new
chr14	58211083	58223827	chr14:58211083-58223827	0	+	58211083	58211083	8553170	6	316,68,80,36,80,45,	0,2547,4121,8610,12538,12699,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	58213033	58234734	chr14:58213033-58234734	0	+	58213033	58213033	8553170	8	665,80,36,80,74,82,202,365,	0,2171,6660,10588,10749,17365,19032,21336,
#Partially deleted in new
chr14	58219517	58230476	chr14:58219517-58230476	0	+	58219517	58219517	8553170	3	212,235,76,	0,4104,10883,
#Partially deleted in new
chr14	58219669	58232268	chr14:58219669-58232268	0	+	58219669	58219669	8553170	5	60,80,74,82,203,	0,3952,4113,10729,12396,
#Partially deleted in new
chr14	58223492	58232108	chr14:58223492-58232108	0	+	58223492	58223492	8553170	3	364,82,43,	0,6906,8573,
#Partially deleted in new
chr14	58223598	58232268	chr14:58223598-58232268	0	+	58223598	58223598	8553170	4	103,74,82,203,	0,184,6800,8467,
#Partially deleted in new
chr14	58223622	58234786	chr14:58223622-58234786	0	+	58223622	58230425	789624	4	79,82,202,417,	0,6776,8443,10747,
#Partially deleted in new
chr14	58223637	58234790	chr14:58223637-58234790	0	+	58223637	58234551	789624	3	64,202,421,	0,8428,10732,
#Partially deleted in new
chr14	58244830	58272007	chr14:58244830-58272007	3	+	58244920	58271895	0	11	111,83,124,102,74,73,66,47,68,65,157,	0,2919,7288,12914,13094,16117,18874,22643,25587,26103,27020,
#Partially deleted in new
chr14	58244845	58268139	chr14:58244845-58268139	0	+	58244845	58244845	8553170	8	96,83,119,102,74,73,66,666,	0,2904,7278,12899,13079,16102,18859,22628,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	58244855	58258454	chr14:58244855-58258454	0	+	58244855	58244855	8553170	5	86,83,124,102,530,	0,2894,7263,12889,13069,
#Partially deleted in new
chr14	58244865	58270998	chr14:58244865-58270998	0	+	58244920	58257751	789624	9	76,83,102,74,73,66,47,68,65,	0,2884,12879,13059,16082,18839,22608,25552,26068,
#Partially deleted in new
chr14	58244872	58267504	chr14:58244872-58267504	0	+	58244920	58252184	789624	8	69,83,119,102,74,62,66,31,	0,2877,7251,12872,13052,16086,18832,22601,
#Deleted in new
chr14	58244873	58245478	chr14:58244873-58245478	0	+	58244873	58244873	8553170	2	68,367,	0,238,
#Partially deleted in new
chr14	58244876	58272012	chr14:58244876-58272012	1	+	58244920	58271895	0	11	65,83,124,102,74,52,66,47,68,65,162,	0,2873,7242,12868,13048,16092,18828,22597,25541,26057,26974,
#Partially deleted in new
chr14	58244878	58267528	chr14:58244878-58267528	0	+	58244878	58244878	8553170	8	63,83,124,102,74,73,66,55,	0,2871,7240,12866,13046,16069,18826,22595,
#Partially deleted in new
chr14	58244903	58272007	chr14:58244903-58272007	1	+	58252239	58271895	789624	10	38,124,102,74,73,66,47,68,65,157,	0,7215,12841,13021,16044,18801,22570,25514,26030,26947,
#Partially deleted in new
chr14	58247788	58258081	chr14:58247788-58258081	0	+	58247788	58247788	8553170	3	44,119,337,	0,4335,9956,
#Partially deleted in new
chr14	58257924	58272006	chr14:58257924-58272006	0	+	58257924	58271895	789624	4	74,68,65,156,	0,12493,13009,13926,
#Partially deleted in new
chr14	58263523	58267796	chr14:58263523-58267796	0	+	58263523	58263523	8553170	2	247,323,	0,3950,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	58265364	58298129	chr14:58265364-58298129	3	-	58265364	58265364	789624	5	2029,32,166,73,175,	0,8614,20226,26270,32590,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	58266607	58298102	chr14:58266607-58298102	1	-	58266607	58266607	8553170	4	786,32,73,148,	0,7371,25027,31347,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	58266888	58298122	chr14:58266888-58298122	1	-	58266888	58266888	789624	4	505,157,73,168,	0,7090,24746,31066,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	58266984	58268875	chr14:58266984-58268875	0	-	58266984	58266984	8553170	2	409,170,	0,1721,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	58267103	58298134	chr14:58267103-58298134	0	-	58267103	58267103	8553170	5	290,32,166,73,180,	0,6875,18487,24531,30851,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	58269974	58272004	chr14:58269974-58272004	0	+	58269974	58269974	8553170	3	511,65,154,	0,959,1876,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	58272400	58298129	chr14:58272400-58298129	0	-	58272400	58272400	8553170	3	1735,73,175,	0,19234,25554,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	58272614	58274114	chr14:58272614-58274114	1	-	58272614	58272614	8553170	2	362,477,	0,1023,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	58273640	58298115	chr14:58273640-58298115	0	-	58273640	58273640	8553170	3	370,73,161,	0,17994,24314,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	58273935	58298120	chr14:58273935-58298120	1	-	58273935	58273935	8553170	4	75,73,2046,166,	0,17699,19830,24019,
#Partially deleted in new
chr14	58274013	58298084	chr14:58274013-58298084	0	-	58274013	58274013	8553170	4	122,73,73,130,	0,17621,19052,23941,
#Partially deleted in new
chr14	58284772	58285363	chr14:58284772-58285363	7	+	58284772	58284772	16724991	1	591,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	58285585	58287023	chr14:58285585-58287023	0	-	58285585	58285585	8553170	2	171,384,	0,1054,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	58285731	58298132	chr14:58285731-58298132	0	-	58285731	58285731	8553170	4	25,73,231,178,	0,5903,7582,12223,
#Partially deleted in new
chr14	58285731	58298133	chr14:58285731-58298133	1	-	58285731	58285731	8553170	5	25,96,73,73,179,	0,2986,5903,7334,12223,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	58288032	58289158	chr14:58288032-58289158	3	+	58288032	58288032	789624	1	1126,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	58288032	58289147	chr14:58288032-58289147	0	+	58288032	58288032	8553170	1	1115,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	58292292	58292388	chr14:58292292-58292388	3	-	58292292	58292292	8553170	1	96,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	58293501	58298126	chr14:58293501-58298126	0	-	58293501	58293501	8553170	2	425,172,	0,4453,
#Partially deleted in new
chr14	58298384	58373733	chr14:58298384-58373733	3	+	58299854	58371989	0	24	316,63,111,66,91,80,95,133,80,77,167,73,95,98,232,251,198,85,142,1131,105,207,147,1848,	0,1413,3195,6559,7637,20157,20326,25100,29852,31143,31618,46310,48026,48635,49262,52688,55273,60747,62516,65785,67133,67639,68498,73501,
#Partially deleted in new
chr14	58298503	58373730	chr14:58298503-58373730	1	+	58299854	58371989	0	23	197,63,111,66,91,80,95,133,80,77,167,73,95,98,232,251,198,85,142,1131,105,147,1845,	0,1294,3076,6440,7518,20038,20207,24981,29733,31024,31499,46191,47907,48516,49143,52569,55154,60628,62397,65666,67014,68379,73382,
#Partially deleted in new
chr14	58298555	58372226	chr14:58298555-58372226	1	+	58299854	58371989	0	24	145,63,111,66,91,80,95,133,80,77,167,73,95,98,232,251,198,85,142,1131,105,45,147,341,	0,1242,3024,6388,7466,19986,20155,24929,29681,30972,31447,46139,47855,48464,49091,52517,55102,60576,62345,65614,66962,67468,68327,73330,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	58298558	58306112	chr14:58298558-58306112	0	+	58299854	58303543	789624	6	142,63,111,224,66,91,	0,1239,3021,4979,6385,7463,
#Partially deleted in new
chr14	58298587	58330169	chr14:58298587-58330169	0	+	58299854	58330169	789624	10	113,63,66,91,80,95,133,80,77,167,	0,1210,6356,7434,19954,20123,24897,29649,30940,31415,
#Partially deleted in new
chr14	58299330	58304990	chr14:58299330-58304990	0	+	58299854	58304990	789624	4	361,63,111,47,	0,467,2249,5613,
#Partially deleted in new
chr14	58299536	58373887	chr14:58299536-58373887	1	+	58299854	58371989	0	22	324,111,66,91,80,95,133,80,77,167,73,95,98,232,251,198,85,142,1131,105,147,2002,	0,2043,5407,6485,19005,19174,23948,28700,29991,30466,45158,46874,47483,48110,51536,54121,59595,61364,64633,65981,67346,72349,
#Partially deleted in new
chr14	58331286	58365300	chr14:58331286-58365300	0	+	58344754	58365300	789624	10	232,73,95,98,232,251,198,85,142,1131,	0,13408,15124,15733,16360,19786,22371,27845,29614,32883,
#Partially deleted in new
chr14	58351296	58359172	chr14:58351296-58359172	0	+	58351296	58351296	8553170	3	380,198,41,	0,2361,7835,
#Partially deleted in new
chr14	58353453	58360991	chr14:58353453-58360991	0	+	58353453	58353453	8553170	3	402,85,91,	0,5678,7447,
#Partially deleted in new
chr14	58365474	58371960	chr14:58365474-58371960	0	+	58365474	58365474	8553170	3	148,147,75,	0,1408,6411,
#Partially deleted in new
chr14	58370022	58395641	chr14:58370022-58395641	3	-	58370022	58370022	8553170	2	58,341,	0,25278,
#Partially deleted in new
chr14	58395915	58408701	chr14:58395915-58408701	3	+	58395957	58408582	789624	5	178,44,82,143,173,	0,382,6764,11410,12613,
#Partially deleted in new
chr14	58395927	58408613	chr14:58395927-58408613	0	+	58395957	58407370	789624	4	166,44,143,85,	0,370,11398,12601,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	58398556	58427125	chr14:58398556-58427125	3	+	58398556	58398556	8553170	2	374,62,	0,28507,
#Partially deleted in new
chr14	58408493	58427614	chr14:58408493-58427614	3	-	58409033	58411945	0	6	675,96,65,88,189,223,	0,2349,3413,15514,18560,18898,
#Partially deleted in new
chr14	58408602	58427527	chr14:58408602-58427527	0	-	58408602	58408602	789624	5	566,96,88,189,136,	0,2240,15405,18451,18789,
#Partially deleted in new
chr14	58408647	58427505	chr14:58408647-58427505	1	-	58409033	58411945	0	4	521,96,65,114,	0,2195,3259,18744,
#Partially deleted in new
chr14	58408663	58427114	chr14:58408663-58427114	1	-	58409033	58411945	789624	5	436,96,65,88,61,	0,2179,3243,15344,18390,
#Partially deleted in new
chr14	58408811	58427171	chr14:58408811-58427171	0	-	58408811	58408811	789624	3	357,96,118,	0,2031,18242,
#Partially deleted in new
chr14	58408873	58412113	chr14:58408873-58412113	1	-	58409033	58411945	0	3	295,96,207,	0,1969,3033,
#Partially deleted in new
chr14	58408879	58427174	chr14:58408879-58427174	1	-	58409033	58411945	789624	5	202,96,65,88,121,	0,1963,3027,15128,18174,
#Partially deleted in new
chr14	58408978	58427146	chr14:58408978-58427146	1	-	58409033	58411945	789624	5	106,96,65,88,93,	0,1864,2928,15029,18075,
#Partially deleted in new
chr14	58409033	58427187	chr14:58409033-58427187	1	-	58409033	58411945	0	4	135,96,65,134,	0,1809,2873,18020,
#Partially deleted in new
chr14	58410844	58427161	chr14:58410844-58427161	0	-	58410844	58411945	789624	5	94,65,22,88,108,	0,1062,12983,13163,16209,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr14	58427384	58548023	chr14:58427384-58548023	3	+	58427628	58547976	789624	34	253,226,71,70,70,123,175,222,154,168,124,109,221,73,228,175,195,188,111,81,191,119,200,160,223,254,77,132,178,155,106,66,85,243,	0,853,1978,3263,5003,13836,15321,16569,20955,23194,25965,29317,30374,31088,32458,33601,38450,40350,43228,44814,47222,49738,55128,59622,60502,61236,62779,64759,71398,81170,85137,112686,116498,120396,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr14	58427384	58548828	chr14:58427384-58548828	1	+	58429418	58547932	789624	33	253,192,71,70,70,123,175,222,154,168,124,109,221,73,228,175,195,188,111,81,191,119,200,160,223,254,77,132,178,155,106,66,1048,	0,887,1978,3263,5003,13836,15321,16569,20955,23194,25965,29317,30374,31088,32458,33601,38450,40350,43228,44814,47222,49738,55128,59622,60502,61236,62779,64759,71398,81170,85137,112686,120396,
#Partially deleted in new
chr14	58427384	58548828	chr14:58427384-58548828	1	+	58429418	58547932	789624	31	253,71,70,70,175,222,154,168,124,109,221,73,228,175,195,188,111,81,191,119,200,160,223,254,77,132,178,155,106,66,1048,	0,1978,3263,5003,15321,16569,20955,23194,25965,29317,30374,31088,32458,33601,38450,40350,43228,44814,47222,49738,55128,59622,60502,61236,62779,64759,71398,81170,85137,112686,120396,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr14	58427401	58551289	chr14:58427401-58551289	1	+	58428309	58547932	789624	32	236,192,71,70,70,175,222,154,168,124,109,221,73,228,175,195,188,111,81,191,119,200,160,223,254,77,132,178,155,106,66,3509,	0,870,1961,3246,4986,15304,16552,20938,23177,25948,29300,30357,31071,32441,33584,38433,40333,43211,44797,47205,49721,55111,59605,60485,61219,62762,64742,71381,81153,85120,112669,120379,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr14	58427435	58548498	chr14:58427435-58548498	1	+	58429418	58547932	789624	32	202,71,70,70,123,175,222,154,168,124,109,221,73,228,175,195,188,111,81,191,119,200,160,223,254,77,132,178,155,106,66,718,	0,1927,3212,4952,13785,15270,16518,20904,23143,25914,29266,30323,31037,32407,33550,38399,40299,43177,44763,47171,49687,55077,59571,60451,61185,62728,64708,71347,81119,85086,112635,120345,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	58427683	58444030	chr14:58427683-58444030	0	+	58429418	58442729	789624	7	130,71,70,70,91,175,77,	0,1679,2964,4704,12386,15022,16270,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	58427721	58441280	chr14:58427721-58441280	0	+	58427721	58427721	8553170	6	92,71,70,70,233,60,	0,1641,2926,4666,5390,13499,
#Partially deleted in new
chr14	58427727	58444019	chr14:58427727-58444019	0	+	58429418	58444019	789624	6	130,71,70,70,175,66,	0,1635,2920,4660,14978,16226,
#Partially deleted in new
chr14	58427727	58448491	chr14:58427727-58448491	0	+	58429418	58448491	789624	7	86,71,70,70,175,222,152,	0,1635,2920,4660,14978,16226,20612,
#Partially deleted in new
chr14	58427989	58548045	chr14:58427989-58548045	1	+	58428264	58547932	789624	30	474,71,70,70,175,222,154,168,124,109,221,73,175,195,188,111,81,191,119,200,160,223,254,77,132,178,155,106,66,265,	0,1373,2658,4398,14716,15964,20350,22589,25360,28712,29769,30483,32996,37845,39745,42623,44209,46617,49133,54523,59017,59897,60631,62174,64154,70793,80565,84532,112081,119791,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	58440970	58444047	chr14:58440970-58444047	0	+	58440970	58440970	8553170	3	373,175,94,	0,1735,2983,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	58441843	58441992	chr14:58441843-58441992	3	+	58441843	58441843	8553170	1	149,	0,
#Partially deleted in new
chr14	58442705	58537219	chr14:58442705-58537219	0	+	58442705	58442705	8553170	26	175,222,154,168,124,109,221,73,228,175,195,188,111,81,191,119,200,160,223,254,77,132,178,155,106,213,	0,1248,5634,7873,10644,13996,15053,15767,17137,18280,23129,25029,27907,29493,31901,34417,39807,44301,45181,45915,47458,49438,56077,65849,69816,94301,
#Deleted in new
chr14	58463970	58464136	chr14:58463970-58464136	7	+	58463970	58463970	16724991	1	166,	0,
#Partially deleted in new
chr14	58490204	58548119	chr14:58490204-58548119	0	+	58490204	58547932	789624	5	36,178,155,106,339,	0,8578,18350,22317,57576,
#Partially deleted in new
chr14	58508570	58521200	chr14:58508570-58521200	0	+	58508570	58508570	8553170	3	139,106,279,	0,3951,12351,
#Deleted in new
chr14	58521222	58521988	chr14:58521222-58521988	7	+	58521222	58521222	16724991	1	766,	0,
#Partially deleted in new
chr14	58539866	58548054	chr14:58539866-58548054	0	+	58539866	58539866	8553170	2	270,274,	0,7914,
#Deleted in new
chr14	58564145	58564616	chr14:58564145-58564616	7	+	58564145	58564145	16724991	1	471,	0,
#Partially deleted in new
chr14	58633966	58645472	chr14:58633966-58645472	0	+	58633966	58633966	8553170	4	219,133,156,104,	0,6769,7625,11402,
#Partially deleted in new
chr14	58634067	58647200	chr14:58634067-58647200	1	+	58645466	58647134	789624	4	118,133,156,1832,	0,6668,7524,11301,
#Partially deleted in new
chr14	58634080	58645856	chr14:58634080-58645856	0	+	58645466	58645856	789624	4	105,133,156,599,	0,6655,7511,11177,
#Partially deleted in new
chr14	58638055	58648321	chr14:58638055-58648321	1	+	58638202	58647134	789624	4	492,133,156,2953,	0,2680,3536,7313,
#Partially deleted in new
chr14	58638178	58647170	chr14:58638178-58647170	3	+	58638202	58647134	789624	4	369,133,156,1913,	0,2557,3413,7079,
#Partially deleted in new
chr14	58638836	58647263	chr14:58638836-58647263	1	+	58645466	58647134	789624	4	426,133,156,1895,	0,1899,2755,6532,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	58646630	59017532	chr14:58646630-59017532	3	+	58646630	58646630	8553170	14	378,105,53,71,294,125,197,189,80,29,108,84,120,270,	0,3213,46723,119959,157397,242167,243693,247512,263632,301682,310377,311905,362400,370632,
#Deleted in new
chr14	58794653	58795029	chr14:58794653-58795029	7	+	58794653	58794653	16724991	1	376,	0,
#Deleted in new
chr14	58827678	58828176	chr14:58827678-58828176	7	-	58827678	58827678	16724991	1	498,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	58828233	58894284	chr14:58828233-58894284	1	+	58828233	58828233	8553170	4	322,125,197,142,	0,60564,62090,65909,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	58828287	59009155	chr14:58828287-59009155	0	+	58828287	58828287	8553170	5	268,189,80,29,125,	0,65855,81975,120025,180743,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	58828287	59017328	chr14:58828287-59017328	1	+	58828287	58828287	789624	6	268,189,80,29,120,66,	0,65855,81975,120025,180743,188975,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	58894165	59017328	chr14:58894165-59017328	0	+	58894165	58894165	8553170	4	166,80,117,66,	0,16097,114868,123097,
#Deleted in new
chr14	59135487	59136421	chr14:59135487-59136421	7	-	59135487	59135487	16724991	1	934,	0,
#Deleted in new
chr14	59181592	59181940	chr14:59181592-59181940	7	+	59181592	59181592	16724991	1	348,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	59188645	59266161	chr14:59188645-59266161	0	+	59188645	59188645	8553170	2	123,2721,	0,74795,
#Partially deleted in new
chr14	59188679	59369753	chr14:59188679-59369753	3	+	59263477	59368859	0	25	89,220,90,72,95,334,111,104,67,118,139,59,188,300,108,107,85,107,89,169,108,61,132,171,1104,	0,74761,102537,126600,131810,134212,135448,135671,136984,137280,137830,138253,141821,142529,143133,151394,158859,163846,165196,166485,170717,172122,174971,178749,179970,
#Partially deleted in new
chr14	59188698	59291508	chr14:59188698-59291508	1	+	59263477	59291324	789624	3	70,220,292,	0,74742,102518,
#Partially deleted in new
chr14	59263454	59371405	chr14:59263454-59371405	1	+	59263477	59368859	0	25	206,90,72,95,334,111,104,67,118,139,59,188,300,108,30,107,85,107,89,169,108,61,132,171,2756,	0,27762,51825,57035,59437,60673,60896,62209,62505,63055,63478,67046,67754,68358,74930,76619,84084,89071,90421,91710,95942,97347,100196,103974,105195,
#Partially deleted in new
chr14	59299714	59323057	chr14:59299714-59323057	0	+	59299714	59299714	8553170	3	301,95,166,	0,20775,23177,
#Deleted in new
chr14	59324349	59326115	chr14:59324349-59326115	0	+	59324349	59324349	8553170	3	105,67,156,	0,1314,1610,
#Partially deleted in new
chr14	59331429	59355284	chr14:59331429-59355284	0	+	59331429	59331429	8553170	7	79,108,107,85,107,89,120,	0,383,8644,16109,21096,22446,23735,
#Partially deleted in new
chr14	59347546	59369753	chr14:59347546-59369753	0	+	59347546	59347546	8553170	8	77,107,64,101,108,132,171,1104,	0,4979,6329,7686,11850,16104,19882,21103,
#Partially deleted in new
chr14	59355160	59369434	chr14:59355160-59369434	0	+	59355160	59355160	8553170	6	173,108,61,132,171,785,	0,4236,5641,8490,12268,13489,
#Partially deleted in new
chr14	59357300	59367547	chr14:59357300-59367547	0	+	59357300	59357300	8553170	5	30,108,61,132,119,	0,2096,3501,6350,10128,
#Partially deleted in new
chr14	59359254	59367547	chr14:59359254-59367547	0	+	59359254	59359254	8553170	4	250,61,132,119,	0,1547,4396,8174,
#Partially deleted in new
chr14	59360641	59367549	chr14:59360641-59367549	0	+	59360641	59360641	8553170	3	221,132,121,	0,3009,6787,
#Partially deleted in new
chr14	59362260	59369753	chr14:59362260-59369753	0	+	59362260	59362260	8553170	3	1522,171,1104,	0,5168,6389,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	59429021	59465341	chr14:59429021-59465341	0	-	59463741	59465226	789624	7	66,77,108,148,202,100,1839,	0,26662,27416,29835,31950,32244,34481,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	59460362	59475898	chr14:59460362-59475898	0	-	59460362	59460362	8553170	3	230,202,30,	0,609,15506,
#Deleted in new
chr14	59460764	59465342	chr14:59460764-59465342	3	-	59463741	59465226	789624	1	4578,	0,
#Partially deleted in new
chr14	59472616	59484430	chr14:59472616-59484430	3	-	59472964	59484316	789624	5	474,138,123,170,622,	0,3252,3475,6565,11192,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	59472860	59476111	chr14:59472860-59476111	0	-	59472860	59472860	8553170	4	230,88,138,20,	0,1578,3008,3231,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	59472862	59474939	chr14:59472862-59474939	0	-	59472862	59472862	8553170	2	228,501,	0,1576,
#Partially deleted in new
chr14	59472864	59475113	chr14:59472864-59475113	0	-	59472864	59472864	8553170	2	226,386,	0,1863,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	59472970	59475208	chr14:59472970-59475208	0	-	59472970	59472970	8553170	3	120,88,481,	0,1468,1757,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	59474453	59483685	chr14:59474453-59483685	1	-	59474514	59479346	789624	5	73,138,123,170,196,	0,1415,1638,4728,9036,
#Partially deleted in new
chr14	59475868	59484006	chr14:59475868-59484006	0	-	59475868	59479346	789624	4	138,123,170,327,	0,223,3313,7811,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	59478725	59484408	chr14:59478725-59484408	0	-	59478725	59478725	8553170	2	626,729,	0,4954,
#Partially deleted in new
chr14	59479273	59525437	chr14:59479273-59525437	3	-	59479273	59479273	8553170	6	78,127,163,44,103,156,	0,25915,31372,32486,42300,46008,
#Partially deleted in new
chr14	59484442	59504715	chr14:59484442-59504715	3	+	59484589	59504072	789624	7	151,92,155,207,182,77,862,	0,2270,3231,10575,14284,16748,19411,
#Partially deleted in new
chr14	59484442	59505404	chr14:59484442-59505404	1	+	59485070	59504072	789624	8	151,127,74,155,207,182,77,1551,	0,547,2288,3231,10575,14284,16748,19411,
#Partially deleted in new
chr14	59484442	59505404	chr14:59484442-59505404	1	+	59484589	59498907	789624	6	151,92,155,207,182,1551,	0,2270,3231,10575,14284,19411,
#Partially deleted in new
chr14	59484444	59498777	chr14:59484444-59498777	0	+	59484444	59484444	8553170	4	149,155,207,51,	0,3229,10573,14282,
#Partially deleted in new
chr14	59484491	59495152	chr14:59484491-59495152	0	+	59484491	59484491	8553170	5	102,127,92,155,135,	0,498,2221,3182,10526,
#Partially deleted in new
chr14	59484502	59504703	chr14:59484502-59504703	1	+	59484589	59504072	789624	7	91,74,155,207,182,77,850,	0,2228,3171,10515,14224,16688,19351,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	59484527	59485968	chr14:59484527-59485968	0	+	59484527	59484527	8553170	2	66,504,	0,937,
#Partially deleted in new
chr14	59484530	59501247	chr14:59484530-59501247	0	+	59484589	59498828	789624	6	63,92,155,70,182,57,	0,2182,3143,10487,14196,16660,
#Partially deleted in new
chr14	59484536	59495305	chr14:59484536-59495305	1	+	59484589	59495228	789624	4	57,92,155,288,	0,2176,3137,10481,
#Partially deleted in new
chr14	59484544	59504705	chr14:59484544-59504705	1	+	59485070	59504072	789624	7	572,92,155,207,182,77,852,	0,2168,3129,10473,14182,16646,19309,
#Partially deleted in new
chr14	59484559	59501267	chr14:59484559-59501267	0	+	59485070	59501267	789624	7	34,127,74,155,207,182,77,	0,430,2171,3114,10458,14167,16631,
#Partially deleted in new
chr14	59484568	59504274	chr14:59484568-59504274	0	+	59484568	59484568	8553170	7	25,124,155,207,182,77,421,	0,2112,3105,10449,14158,16622,19285,
#Partially deleted in new
chr14	59486680	59505410	chr14:59486680-59505410	0	+	59486680	59486680	8553170	6	124,155,207,182,77,1557,	0,993,8337,12046,14510,17173,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	59487193	59504703	chr14:59487193-59504703	0	+	59487193	59487193	8553170	5	635,207,182,77,850,	0,7824,11533,13997,16660,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	59500881	59504036	chr14:59500881-59504036	0	+	59500881	59500881	8553170	2	386,183,	0,2972,
#Partially deleted in new
chr14	59504538	59510713	chr14:59504538-59510713	0	-	59504538	59504538	8553170	3	131,127,68,	0,650,6107,
#Partially deleted in new
chr14	59505060	59576831	chr14:59505060-59576831	3	-	59505238	59576775	789624	20	255,163,44,103,153,80,139,132,136,72,111,137,82,110,123,229,136,112,86,213,	0,5585,6699,16513,20221,22034,26711,32962,33644,35614,38283,40102,46294,56058,58676,59986,63184,67641,69882,71558,
#Partially deleted in new
chr14	59510429	59576775	chr14:59510429-59576775	1	-	59510429	59576775	789624	20	159,186,44,103,153,80,139,132,136,72,111,137,82,110,123,229,136,112,86,157,	0,193,1330,11144,14852,16665,21342,27593,28275,30245,32914,34733,40925,50689,53307,54617,57815,62272,64513,66189,
#Partially deleted in new
chr14	59540682	59564454	chr14:59540682-59564454	0	-	59540682	59540682	8553170	6	64,111,68,110,123,97,	0,2661,10672,20436,23054,23675,
#Partially deleted in new
chr14	59551171	59564490	chr14:59551171-59564490	0	-	59551171	59551171	8553170	4	265,110,123,133,	0,9947,12565,13186,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	59595975	59606102	chr14:59595975-59606102	0	-	59595975	59595975	8553170	4	812,59,47,2251,	0,7089,7236,7876,
#Partially deleted in new
chr14	59595976	59870966	chr14:59595976-59870966	1	-	59596744	59870630	789624	9	811,59,47,70,139,208,750,774,577,	0,7088,7235,7875,9391,11308,130942,149731,274413,
#Partially deleted in new
chr14	59595976	59630814	chr14:59595976-59630814	3	-	59596744	59630506	789624	7	811,59,47,70,139,208,369,	0,7088,7235,7875,9391,11308,34469,
#Partially deleted in new
chr14	59595976	59630609	chr14:59595976-59630609	1	-	59596744	59610137	789624	8	811,59,47,70,139,208,111,164,	0,7088,7235,7875,9391,11308,14145,34469,
#Partially deleted in new
chr14	59596004	59727713	chr14:59596004-59727713	0	-	59596004	59596004	8553170	7	783,59,47,70,139,208,795,	0,7060,7207,7847,9363,11280,130914,
#Partially deleted in new
chr14	59596013	59607607	chr14:59596013-59607607	0	-	59596013	59596013	8553170	6	774,59,47,70,139,323,	0,7051,7198,7838,9354,11271,
#Partially deleted in new
chr14	59596327	59870752	chr14:59596327-59870752	1	-	59596744	59870408	789624	10	460,59,47,70,139,208,750,774,31,109,	0,6737,6884,7524,9040,10957,130591,149380,274062,274316,
#Partially deleted in new
chr14	59596756	59630612	chr14:59596756-59630612	0	-	59596756	59596756	8553170	6	31,59,47,70,208,167,	0,6308,6455,7095,10528,33689,
#Partially deleted in new
chr14	59603760	59605509	chr14:59603760-59605509	0	-	59603760	59603760	8553170	2	161,142,	0,1607,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	59646961	59647020	chr14:59646961-59647020	3	-	59646961	59646961	5263520	1	59,	0,
#Deleted in new
chr14	59919422	59920339	chr14:59919422-59920339	3	-	59919422	59919422	8553170	2	353,154,	0,763,
#Partially deleted in new
chr14	59919712	60063559	chr14:59919712-60063559	0	+	59927943	60018364	789624	33	171,81,219,141,64,71,183,156,197,132,177,118,133,123,116,213,120,192,126,135,178,221,123,131,134,140,137,218,73,141,145,169,237,	0,8198,8555,11205,11906,12256,18677,24876,40105,41201,46876,47383,54863,57512,58304,62135,65392,77943,79388,82253,83908,86684,88379,96947,98633,99408,103021,108171,112282,133352,138165,142298,143610,
#Partially deleted in new
chr14	59919712	60063559	chr14:59919712-60063559	1	+	59927943	60063408	789624	32	171,81,219,141,64,71,183,156,197,132,177,118,133,123,116,213,120,192,126,135,178,221,123,131,109,140,137,218,69,141,145,237,	0,8198,8555,11205,11906,12256,18677,24876,40105,41201,46876,47383,54863,57512,58304,62135,65392,77943,79388,82253,83908,86684,88379,96947,98658,99408,103021,108171,112282,133352,138165,143610,
#Partially deleted in new
chr14	59919712	60063559	chr14:59919712-60063559	3	+	59927943	60063362	789624	33	171,81,219,141,64,71,183,156,197,132,177,118,133,123,116,213,120,192,126,135,178,221,123,131,109,140,137,218,69,141,145,169,237,	0,8198,8555,11205,11906,12256,18677,24876,40105,41201,46876,47383,54863,57512,58304,62135,65392,77943,79388,82253,83908,86684,88379,96947,98658,99408,103021,108171,112282,133352,138165,142298,143610,
#Partially deleted in new
chr14	59919780	59959979	chr14:59919780-59959979	0	+	59919780	59919780	8553170	7	103,141,64,71,183,156,162,	0,11137,11838,12188,18609,24808,40037,
#Partially deleted in new
chr14	59920148	59930992	chr14:59920148-59930992	0	+	59927943	59930992	789624	4	125,81,219,75,	0,7762,8119,10769,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	59969115	60091783	chr14:59969115-60091783	3	-	59969115	59969115	8553170	4	287,51,83,81,	0,4347,61180,122587,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	59969115	60057651	chr14:59969115-60057651	0	-	59969115	59969115	8553170	4	287,51,83,70,	0,4347,61180,88466,
#Deleted in new
chr14	60003636	60006748	chr14:60003636-60006748	0	+	60003636	60003636	8553170	2	162,352,	0,2760,
#Partially deleted in new
chr14	60028055	60063406	chr14:60028055-60063406	0	+	60028055	60053955	789624	7	46,69,141,145,145,169,84,	0,3939,25009,25819,29822,33955,35267,
#Partially deleted in new
chr14	60053064	60063458	chr14:60053064-60063458	0	+	60053064	60059065	789624	5	141,145,56,169,136,	0,4813,5996,8946,10258,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	60091910	60148221	chr14:60091910-60148221	3	+	60114712	60134221	789624	10	509,180,488,101,120,364,104,1034,187,14252,	0,22789,23063,23808,24030,26418,29285,32307,33726,42059,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	60091918	60111157	chr14:60091918-60111157	1	+	60107638	60108331	789624	2	501,3572,	0,15667,
#Partially deleted in new
chr14	60091918	60134814	chr14:60091918-60134814	1	+	60107638	60134221	789624	11	501,742,180,488,101,120,364,104,1034,187,845,	0,15667,22781,23055,23800,24022,26410,29277,32299,33718,42051,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	60091926	60169133	chr14:60091926-60169133	1	+	60114712	60168748	789624	10	493,180,488,101,120,364,104,1034,187,442,	0,22773,23047,23792,24014,26402,29269,32291,33710,76765,
#Partially deleted in new
chr14	60091976	60115770	chr14:60091976-60115770	0	+	60091976	60091976	8553170	2	443,52,	0,23742,
#Partially deleted in new
chr14	60092185	60114980	chr14:60092185-60114980	0	+	60092185	60092185	8553170	2	234,281,	0,22514,
#Partially deleted in new
chr14	60115343	60126190	chr14:60115343-60126190	0	+	60115343	60115343	8553170	7	118,101,120,316,104,1034,554,	0,375,597,3033,5852,8874,10293,
#Partially deleted in new
chr14	60115620	60118549	chr14:60115620-60118549	0	+	60115620	60115620	8553170	3	199,120,221,	0,320,2708,
#Partially deleted in new
chr14	60115981	60124273	chr14:60115981-60124273	0	+	60115981	60124273	789624	4	79,118,104,56,	0,2593,5214,8236,
#Partially deleted in new
chr14	60118442	60134809	chr14:60118442-60134809	0	+	60118442	60133664	789624	6	250,104,1034,187,130,840,	0,2753,5775,7194,15213,15527,
#Partially deleted in new
chr14	60118623	60134227	chr14:60118623-60134227	0	+	60118623	60125660	789624	5	69,104,93,187,258,	0,2572,5594,7013,15346,
#Partially deleted in new
chr14	60124305	60134085	chr14:60124305-60134085	0	+	60124305	60125647	789624	3	408,187,116,	0,1331,9664,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	60144119	60169856	chr14:60144119-60169856	3	-	60144965	60165309	789624	8	894,216,123,240,107,153,429,160,	0,5233,5945,8819,9839,11880,21057,25577,
#Partially deleted in new
chr14	60144783	60165429	chr14:60144783-60165429	1	-	60144965	60165309	789624	7	230,216,123,240,107,153,253,	0,4569,5281,8155,9175,11216,20393,
#Partially deleted in new
chr14	60144783	60165429	chr14:60144783-60165429	1	-	60144853	60165309	789624	8	230,44,171,123,240,107,153,253,	0,4569,4614,5281,8155,9175,11216,20393,
#Partially deleted in new
chr14	60144805	60169843	chr14:60144805-60169843	1	-	60144965	60156135	789624	7	208,216,123,240,107,153,147,	0,4547,5259,8133,9153,11194,24891,
#Partially deleted in new
chr14	60144805	60153174	chr14:60144805-60153174	0	-	60144853	60153174	789624	4	208,119,123,236,	0,4644,5259,8133,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	60147324	60169131	chr14:60147324-60169131	0	+	60147324	60147324	8553170	2	83,440,	0,21367,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	60148947	60165293	chr14:60148947-60165293	0	-	60149109	60165293	789624	6	621,123,240,107,153,117,	0,1117,3991,5011,7052,16229,
#Partially deleted in new
chr14	60149458	60154005	chr14:60149458-60154005	0	-	60149458	60149458	8553170	4	110,53,240,47,	0,606,3480,4500,
#Partially deleted in new
chr14	60150099	60165308	chr14:60150099-60165308	0	-	60150099	60165308	789624	4	88,107,153,132,	0,3859,5900,15077,
#Partially deleted in new
chr14	60152688	60165350	chr14:60152688-60165350	0	-	60152688	60152688	8553170	4	490,107,153,174,	0,1270,3311,12488,
#Partially deleted in new
chr14	60155831	60165418	chr14:60155831-60165418	0	-	60155831	60155831	8553170	2	321,242,	0,9345,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	60156102	60166305	chr14:60156102-60166305	0	-	60156102	60165309	789624	3	50,429,103,	0,9074,10100,
#Deleted in new
chr14	60158975	60159324	chr14:60158975-60159324	7	+	60158975	60158975	16724991	1	349,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	60165308	60169771	chr14:60165308-60169771	0	-	60165308	60165308	8553170	2	291,75,	0,4388,
#Deleted in new
chr14	60179381	60180016	chr14:60179381-60180016	7	+	60179381	60179381	16724991	1	635,	0,
#Deleted in new
chr14	60212461	60212912	chr14:60212461-60212912	7	-	60212461	60212461	16724991	1	451,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	60240120	60245653	chr14:60240120-60245653	3	-	60240120	60240120	8553170	2	2750,109,	0,5424,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	60240126	60248765	chr14:60240126-60248765	0	-	60240126	60240126	8553170	3	328,108,126,	0,2636,8513,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	60240131	60245336	chr14:60240131-60245336	1	-	60240131	60240131	8553170	3	323,108,169,	0,2631,5036,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	60240141	60245568	chr14:60240141-60245568	0	-	60240141	60240141	8553170	3	313,108,24,	0,2621,5403,
#Partially deleted in new
chr14	60245751	60292731	chr14:60245751-60292731	1	+	60245847	60292482	0	6	295,854,118,109,58,279,	0,36932,39872,44054,45645,46701,
#Partially deleted in new
chr14	60245756	60292482	chr14:60245756-60292482	0	+	60245847	60277087	789624	7	290,87,854,118,109,58,30,	0,31248,36927,39867,44049,45640,46696,
#Partially deleted in new
chr14	60245784	60293355	chr14:60245784-60293355	0	+	60245847	60289872	789624	6	262,111,118,109,58,903,	0,36899,39839,44021,45612,46668,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	60249267	60299087	chr14:60249267-60299087	3	+	60282703	60292482	0	6	410,854,118,109,58,6635,	0,33416,36356,40538,42129,43185,
#Partially deleted in new
chr14	60249440	60288555	chr14:60249440-60288555	1	+	60282703	60285764	0	4	237,102,854,2932,	0,939,33243,36183,
#Partially deleted in new
chr14	60249659	60283089	chr14:60249659-60283089	0	+	60282703	60283089	789624	4	18,87,53,406,	0,27345,27653,33024,
#Partially deleted in new
chr14	60250430	60283266	chr14:60250430-60283266	0	+	60282703	60283266	789624	4	51,77,143,583,	0,16784,17862,32253,
#Partially deleted in new
chr14	60256761	60283147	chr14:60256761-60283147	0	+	60282703	60283147	789624	2	105,464,	0,25922,
#Deleted in new
chr14	60323235	60323907	chr14:60323235-60323907	3	+	60323235	60323235	8553170	2	41,297,	0,375,
#Partially deleted in new
chr14	60396468	60455050	chr14:60396468-60455050	0	-	60397830	60455050	789624	5	140,124,103,58,50,	0,1245,36842,45605,58532,
#Deleted in new
chr14	60397756	60398281	chr14:60397756-60398281	7	+	60397756	60397756	16724991	1	525,	0,
#Deleted in new
chr14	60398933	60400013	chr14:60398933-60400013	7	-	60398933	60398933	16724991	2	416,215,	0,865,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr14	60435955	60486096	chr14:60435955-60486096	3	-	60436844	60485078	789624	18	1092,58,145,179,62,59,86,77,128,92,121,43,188,90,127,57,57,152,	0,6118,19045,20961,22722,25398,25552,30023,30961,32489,33577,35461,35596,42344,47735,48925,49074,49989,
#Partially deleted in new
chr14	60436622	60486019	chr14:60436622-60486019	0	-	60468525	60485078	789624	13	425,58,145,179,62,59,86,77,128,89,57,57,75,	0,5451,18378,20294,22055,24731,24885,29356,30294,31822,48258,48407,49322,
#Partially deleted in new
chr14	60471631	60486044	chr14:60471631-60486044	0	-	60471631	60484899	789624	5	108,90,127,57,100,	0,6668,12059,13249,14313,
#Partially deleted in new
chr14	60478356	60515543	chr14:60478356-60515543	0	-	60478356	60485078	789624	6	33,127,57,57,135,149,	0,5334,6524,6673,20939,37038,
#Deleted in new
chr14	60493765	60496885	chr14:60493765-60496885	7	-	60493765	60493765	16724991	1	3120,	0,
#Deleted in new
chr14	60508950	60512850	chr14:60508950-60512850	3	+	60509398	60511252	789624	2	1020,1767,	0,2133,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	60515118	60554916	chr14:60515118-60554916	3	+	60515118	60515118	8553170	2	186,682,	0,39116,
#Deleted in new
chr14	60544399	60544654	chr14:60544399-60544654	7	+	60544399	60544399	16724991	1	255,	0,
#Deleted in new
chr14	60572023	60572311	chr14:60572023-60572311	7	-	60572023	60572023	16724991	1	288,	0,
#Deleted in new
chr14	60602145	60602533	chr14:60602145-60602533	7	-	60602145	60602145	16724991	1	388,	0,
#Deleted in new
chr14	60639215	60642589	chr14:60639215-60642589	3	+	60639215	60639215	8553170	2	1614,472,	0,2902,
#Deleted in new
chr14	60643414	60649462	chr14:60643414-60649462	3	-	60646282	60649189	0	2	3163,833,	0,5215,
#Deleted in new
chr14	60644695	60658259	chr14:60644695-60658259	1	-	60646282	60658223	789624	2	1882,77,	0,13487,
#Deleted in new
chr14	60644698	60649476	chr14:60644698-60649476	1	-	60646282	60649189	0	2	1879,847,	0,3931,
#Deleted in new
chr14	60644930	60653131	chr14:60644930-60653131	0	-	60644930	60644930	8553170	2	1647,1197,	0,7004,
#Deleted in new
chr14	60645269	60653026	chr14:60645269-60653026	0	-	60645269	60645269	8553170	3	1308,184,64,	0,6665,7693,
#Deleted in new
chr14	60651774	60653079	chr14:60651774-60653079	0	-	60651774	60651774	8553170	2	344,117,	0,1188,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	60709527	60724134	chr14:60709527-60724134	3	-	60713406	60724074	789624	3	4676,686,923,	0,10232,13684,
#Partially deleted in new
chr14	60713166	60723165	chr14:60713166-60723165	0	-	60713166	60713166	8553170	4	1037,686,165,115,	0,6593,7813,9884,
#Deleted in new
chr14	60719801	60724348	chr14:60719801-60724348	0	-	60719801	60724258	789624	3	644,836,93,	0,3410,4454,
#Partially deleted in new
chr14	60734741	60753954	chr14:60734741-60753954	0	+	60734741	60734741	8553170	2	210,402,	0,18811,
#Partially deleted in new
chr14	60734761	60969953	chr14:60734761-60969953	3	+	60734862	60968349	0	8	190,153,74,104,141,126,122,1725,	0,61455,63325,73563,77225,83960,144952,233467,
#Partially deleted in new
chr14	60734772	60809015	chr14:60734772-60809015	0	+	60734772	60734772	8553170	4	179,153,74,691,	0,61444,63314,73552,
#Partially deleted in new
chr14	60734775	60968678	chr14:60734775-60968678	1	+	60734862	60968349	0	7	176,153,74,104,141,122,450,	0,61441,63311,73549,77211,144938,233453,
#Partially deleted in new
chr14	60734778	60808428	chr14:60734778-60808428	0	+	60734778	60734778	8553170	2	173,104,	0,73546,
#Deleted in new
chr14	60779977	60780595	chr14:60779977-60780595	7	+	60779977	60779977	16724991	1	618,	0,
#Partially deleted in new
chr14	60796319	60818860	chr14:60796319-60818860	0	+	60796319	60796319	8553170	5	50,74,104,141,100,	0,1767,12005,15667,22441,
#Partially deleted in new
chr14	60808323	60968680	chr14:60808323-60968680	0	+	60808323	60968586	789624	5	105,141,126,122,122,	0,3663,10398,71390,160235,
#Partially deleted in new
chr14	60811985	60880041	chr14:60811985-60880041	0	+	60811985	60811985	8553170	3	142,126,328,	0,6736,67728,
#Partially deleted in new
chr14	60811986	60968680	chr14:60811986-60968680	0	+	60811986	60968349	789624	5	141,126,122,169,122,	0,6735,67727,156242,156572,
#Partially deleted in new
chr14	60879713	60982585	chr14:60879713-60982585	3	+	60879713	60879713	8553170	2	122,78,	0,102794,
#Deleted in new
chr14	60919239	60920155	chr14:60919239-60920155	7	-	60919239	60919239	16724991	1	916,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	60971450	60981358	chr14:60971450-60981358	3	-	60975108	60980973	789624	5	3744,652,125,656,396,	0,4024,6063,7780,9512,
#Partially deleted in new
chr14	60972271	60972466	chr14:60972271-60972466	7	-	60972271	60972271	16724991	1	195,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	60974326	60974435	chr14:60974326-60974435	3	+	60974326	60974326	8553170	1	109,	0,
#Deleted in new
chr14	60979473	60981170	chr14:60979473-60981170	0	-	60979473	60981118	789624	2	413,147,	0,1550,
#Deleted in new
chr14	60979522	60981051	chr14:60979522-60981051	0	-	60979522	60980935	789624	2	364,208,	0,1321,
#Partially deleted in new
chr14	60981161	61052630	chr14:60981161-61052630	3	+	60981277	61052429	789624	16	221,131,74,53,40,79,83,59,66,54,80,101,125,145,95,282,	0,1346,3568,34742,38379,49283,55897,56463,61985,62288,64184,64905,69350,70625,70879,71187,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	60981232	61004637	chr14:60981232-61004637	0	+	60981232	60981232	8553170	4	150,131,74,216,	0,1275,3497,23189,
#Partially deleted in new
chr14	60981236	61002236	chr14:60981236-61002236	0	+	60981236	60981236	8553170	4	146,131,74,208,	0,1271,3493,20792,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr14	60981276	61083729	chr14:60981276-61083729	0	+	60981277	60987068	789624	21	106,131,74,106,53,40,79,95,83,59,66,54,80,101,125,145,95,637,94,98,180,	0,1231,3453,5775,34627,38264,49168,52742,55782,56348,61870,62173,64069,64790,69235,70510,70764,71072,92571,97553,102273,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr14	60981436	61052445	chr14:60981436-61052445	0	+	60981436	60981499	789624	18	251,131,74,106,53,40,79,83,59,66,54,80,101,50,125,145,95,97,	0,1071,3293,5615,34467,38104,49008,55622,56188,61710,62013,63909,64630,66811,69075,70350,70604,70912,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	60982195	61037683	chr14:60982195-61037683	0	+	60982195	60987068	789624	10	48,131,74,106,53,40,79,95,83,59,	0,312,2534,4856,33708,37345,48249,51823,54863,55429,
#Partially deleted in new
chr14	60982364	61037118	chr14:60982364-61037118	0	+	60982564	61037118	789624	6	274,74,53,40,79,60,	0,2365,33539,37176,48080,54694,
#Partially deleted in new
chr14	60982543	60987590	chr14:60982543-60987590	0	+	60982543	60982543	8553170	3	95,74,539,	0,2186,4508,
#Partially deleted in new
chr14	60982556	61043208	chr14:60982556-61043208	0	+	60982556	60987068	789624	8	82,74,106,53,40,79,59,62,	0,2173,4495,33347,36984,47888,55068,60590,
#Partially deleted in new
chr14	60982556	61046072	chr14:60982556-61046072	0	+	60982556	61046072	789624	9	82,74,79,83,59,66,54,80,6,	0,2173,47888,54502,55068,60590,60893,62789,63510,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	60984763	61034299	chr14:60984763-61034299	0	+	60984763	60984763	8553170	5	40,53,40,79,281,	0,31140,34777,45681,49255,
#Partially deleted in new
chr14	61019535	61031039	chr14:61019535-61031039	0	+	61019535	61030527	789624	2	45,595,	0,10909,
#Partially deleted in new
chr14	61043149	61052461	chr14:61043149-61052461	0	+	61043149	61052429	789624	7	63,80,101,125,145,95,113,	0,2196,2917,7362,8637,8891,9199,
#Deleted in new
chr14	61051814	61052459	chr14:61051814-61052459	0	+	61051814	61051814	8553170	2	117,454,	0,191,
#Deleted in new
chr14	61051885	61052464	chr14:61051885-61052464	0	+	61051885	61051885	8553170	2	46,424,	0,155,
#Partially deleted in new
chr14	61187558	61530584	chr14:61187558-61530584	0	+	61485519	61530584	789624	4	110,155,139,178,	0,297943,341516,342848,
#Partially deleted in new
chr14	61187568	61453265	chr14:61187568-61453265	0	+	61443166	61453265	789624	6	100,151,35,89,130,40,	0,255542,258123,261595,263273,265657,
#Partially deleted in new
chr14	61187568	61322455	chr14:61187568-61322455	0	+	61322101	61322455	789624	2	100,462,	0,134425,
#Deleted in new
chr14	61277369	61281840	chr14:61277369-61281840	3	-	61280091	61281147	789624	1	4471,	0,
#Deleted in new
chr14	61279871	61281476	chr14:61279871-61281476	0	-	61279871	61279871	8553170	2	1084,179,	0,1426,
#Deleted in new
chr14	61280802	61281761	chr14:61280802-61281761	0	-	61280802	61280802	8553170	2	282,308,	0,651,
#Partially deleted in new
chr14	61280952	61443211	chr14:61280952-61443211	0	+	61443166	61443211	789624	3	356,64,101,	0,110272,162158,
#Partially deleted in new
chr14	61281148	61449252	chr14:61281148-61449252	0	+	61443166	61449252	789624	5	120,64,151,35,89,	0,110076,161962,164543,168015,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	61281183	61299854	chr14:61281183-61299854	0	+	61281183	61281183	8553170	3	125,94,144,	0,17589,18527,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	61298163	61322794	chr14:61298163-61322794	3	-	61298163	61298163	8553170	3	353,168,260,	0,8904,24371,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	61303020	61322818	chr14:61303020-61322818	1	-	61303020	61303020	8553170	2	4215,284,	0,19514,
#Partially deleted in new
chr14	61321716	61550976	chr14:61321716-61550976	3	+	61322101	61549831	0	14	748,64,151,35,89,130,128,144,174,155,139,189,144,1292,	0,69508,121394,123975,127447,129125,131509,135459,135789,163785,207358,208690,226026,227968,
#Partially deleted in new
chr14	61322663	61550976	chr14:61322663-61550976	1	+	61443166	61549831	0	14	98,64,151,35,89,130,128,144,174,155,139,189,144,1292,	0,68561,120447,123028,126500,128178,130562,134512,134842,162838,206411,207743,225079,227021,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	61322752	61353989	chr14:61322752-61353989	0	+	61322752	61322752	8553170	2	44,501,	0,30736,
#Partially deleted in new
chr14	61326912	61445721	chr14:61326912-61445721	0	+	61326992	61445721	789624	4	269,64,151,30,	0,64312,116198,118779,
#Partially deleted in new
chr14	61344241	61450872	chr14:61344241-61450872	0	+	61443166	61450872	789624	6	175,64,151,35,89,31,	0,46983,98869,101450,104922,106600,
#Partially deleted in new
chr14	61344323	61457181	chr14:61344323-61457181	0	+	61450946	61457181	789624	7	93,64,35,89,130,128,6,	0,46901,101368,104840,106518,108902,112852,
#Partially deleted in new
chr14	61347890	61450885	chr14:61347890-61450885	0	+	61443166	61450885	789624	6	169,64,151,35,89,44,	0,43334,95220,97801,101273,102951,
#Partially deleted in new
chr14	61361073	61449247	chr14:61361073-61449247	0	+	61443166	61449247	789624	5	95,64,151,35,84,	0,30151,82037,84618,88090,
#Partially deleted in new
chr14	61390693	61457557	chr14:61390693-61457557	0	+	61443166	61457557	789624	9	145,64,151,35,89,130,128,144,52,	0,531,52417,54998,58470,60148,62532,66482,66812,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	61442557	61450941	chr14:61442557-61450941	0	+	61443166	61450941	789624	5	192,151,35,89,100,	0,553,3134,6606,8284,
#Partially deleted in new
chr14	61452770	61457653	chr14:61452770-61457653	0	+	61452770	61452770	8553170	4	133,128,144,148,	0,455,4405,4735,
#Deleted in new
chr14	61456841	61457625	chr14:61456841-61457625	0	+	61456841	61456841	8553170	3	240,144,120,	0,334,664,
#Partially deleted in new
chr14	61457505	61476516	chr14:61457505-61476516	0	+	61457505	61457505	8553170	2	174,187,	0,18824,
#Partially deleted in new
chr14	61463068	61529209	chr14:61463068-61529209	0	+	61463068	61463068	8553170	3	292,155,135,	0,22433,66006,
#Partially deleted in new
chr14	61477166	61549946	chr14:61477166-61549946	0	+	61477166	61477166	8553170	6	79,155,139,189,144,262,	0,8335,51908,53240,70576,72518,
#Partially deleted in new
chr14	61485534	61529238	chr14:61485534-61529238	1	+	61485534	61529238	789624	3	122,142,21,	0,43540,43683,
#Partially deleted in new
chr14	61492192	61547864	chr14:61492192-61547864	0	+	61492192	61492192	8553170	4	119,139,189,122,	0,36882,38214,55550,
#Partially deleted in new
chr14	61525089	61529205	chr14:61525089-61529205	0	+	61525089	61525089	8553170	2	137,131,	0,3985,
#Partially deleted in new
chr14	61525651	61547886	chr14:61525651-61547886	0	+	61525651	61525651	8553170	5	156,63,139,189,144,	0,3155,3423,4755,22091,
#Partially deleted in new
chr14	61525651	61549802	chr14:61525651-61549802	0	+	61525651	61525651	8553170	5	156,139,189,144,118,	0,3423,4755,22091,24033,
#Partially deleted in new
chr14	61527936	61547846	chr14:61527936-61547846	0	+	61527936	61527936	8553170	4	125,139,189,104,	0,1138,2470,19806,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	61529127	61657964	chr14:61529127-61657964	3	+	61529127	61657622	789624	4	86,189,144,360,	0,1279,18615,128477,
#Partially deleted in new
chr14	61537507	61545287	chr14:61537507-61545287	3	-	61537507	61537507	8553170	2	399,194,	0,7586,
#Partially deleted in new
chr14	61543361	61550972	chr14:61543361-61550972	0	+	61543361	61543361	8553170	3	1313,144,1288,	0,4381,6323,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	61556312	61570194	chr14:61556312-61570194	0	-	61556312	61556312	789624	4	240,123,69,38,	0,8806,9007,13844,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	61556319	61570653	chr14:61556319-61570653	3	-	61556319	61556319	789624	5	233,4499,69,134,168,	0,4423,9000,13224,14166,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	61570539	61658696	chr14:61570539-61658696	3	+	61570539	61570539	8553170	5	221,56,235,51,1092,	0,80422,83083,86263,87065,
#Partially deleted in new
chr14	61570595	61654713	chr14:61570595-61654713	1	+	61570595	61570595	789624	3	165,56,1091,	0,80366,83027,
#Partially deleted in new
chr14	61647419	61654001	chr14:61647419-61654001	0	+	61647419	61647419	8553170	3	142,56,379,	0,3542,6203,
#Partially deleted in new
chr14	61681040	61695823	chr14:61681040-61695823	3	-	61681040	61681040	789624	2	535,117,	0,14666,
#Partially deleted in new
chr14	61695512	61726763	chr14:61695512-61726763	0	+	61695512	61695512	8553170	4	327,146,85,58,	0,25996,26226,31193,
#Partially deleted in new
chr14	61695512	61721824	chr14:61695512-61721824	0	+	61695512	61695512	8553170	3	327,146,86,	0,25996,26226,
#Partially deleted in new
chr14	61695539	61748258	chr14:61695539-61748258	3	+	61695804	61747085	0	15	300,191,146,85,113,203,107,148,221,287,123,434,109,127,1325,	0,24842,25969,26199,31166,31913,36878,38598,41349,42547,44965,45215,49165,50151,51394,
#Partially deleted in new
chr14	61695539	61748258	chr14:61695539-61748258	1	+	61695804	61747085	789624	15	300,194,146,85,113,203,107,148,221,287,123,434,109,127,1325,	0,24839,25969,26199,31166,31913,36878,38598,41349,42547,44965,45215,49165,50151,51394,
#Partially deleted in new
chr14	61695776	61748258	chr14:61695776-61748258	1	+	61695804	61746939	0	14	63,191,146,85,113,203,107,148,221,287,123,434,109,1325,	0,24605,25732,25962,30929,31676,36641,38361,41112,42310,44728,44978,48928,51157,
#Partially deleted in new
chr14	61697621	61748259	chr14:61697621-61748259	1	+	61697850	61747085	0	15	333,194,146,85,113,203,107,148,221,287,123,434,109,127,1326,	0,22757,23887,24117,29084,29831,34796,36516,39267,40465,42883,43133,47083,48069,49312,
#Partially deleted in new
chr14	61697621	61747771	chr14:61697621-61747771	1	+	61720523	61747085	789624	15	333,194,146,85,113,203,107,148,221,287,123,434,109,127,838,	0,22757,23887,24117,29084,29831,34796,36516,39267,40465,42883,43133,47083,48069,49312,
#Partially deleted in new
chr14	61698894	61727632	chr14:61698894-61727632	0	+	61698894	61698894	8553170	6	52,191,146,85,113,180,	0,21487,22614,22844,27811,28558,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	61715557	61751097	chr14:61715557-61751097	3	-	61715557	61715557	789624	3	271,49,213,	0,1411,35327,
#Deleted in new
chr14	61726420	61727649	chr14:61726420-61727649	0	+	61726420	61726420	8553170	2	398,197,	0,1032,
#Partially deleted in new
chr14	61734137	61776260	chr14:61734137-61776260	3	+	61734137	61734137	8553170	5	148,160,141,105,166,	0,32738,33074,34498,41957,
#Partially deleted in new
chr14	61736889	61741188	chr14:61736889-61741188	0	+	61736889	61736889	8553170	3	220,85,434,	0,3653,3865,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	61740060	61740898	chr14:61740060-61740898	0	+	61740060	61740060	8553170	2	567,144,	0,694,
#Partially deleted in new
chr14	61745604	61747472	chr14:61745604-61747472	0	+	61745604	61745604	8553170	2	213,539,	0,1329,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	61762356	61796428	chr14:61762356-61796428	3	+	61762460	61794983	789624	10	232,160,141,105,159,69,63,151,96,1480,	0,4519,4855,6279,13738,15715,16491,19890,30450,32592,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	61801712	61803634	chr14:61801712-61803634	3	+	61801712	61801712	8553170	1	1922,	0,
#Partially deleted in new
chr14	61811973	61970319	chr14:61811973-61970319	0	+	61811973	61811973	8553170	2	392,188,	0,158158,
#Partially deleted in new
chr14	61812705	61996460	chr14:61812705-61996460	0	+	61812705	61812705	8553170	3	105,180,585,	0,157426,183170,
#Partially deleted in new
chr14	61812720	62075391	chr14:61812720-62075391	0	+	61812797	62075391	789624	4	90,180,213,257,	0,157411,256882,262414,
#Deleted in new
chr14	61831860	61832369	chr14:61831860-61832369	7	-	61831860	61831860	16724991	1	509,	0,
#Partially deleted in new
chr14	61864879	61970313	chr14:61864879-61970313	0	+	61864879	61864879	8553170	3	379,103,182,	0,32373,105252,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	61995822	62112550	chr14:61995822-62112550	3	+	61996019	62100707	789624	6	720,213,257,441,190,12157,	0,73780,79312,85011,88373,104571,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	61995833	62101713	chr14:61995833-62101713	0	+	61996019	62080903	789624	7	709,213,257,89,441,190,1320,	0,73769,79301,83506,85000,88362,104560,
#Partially deleted in new
chr14	62069517	62081154	chr14:62069517-62081154	3	-	62069517	62069517	8553170	3	199,65,58,	0,8087,11579,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	62079346	62101709	chr14:62079346-62101709	1	+	62081166	62100707	789624	4	82,441,190,1316,	0,1487,4849,21047,
#Partially deleted in new
chr14	62103377	62117175	chr14:62103377-62117175	3	-	62103377	62103377	8553170	4	404,105,143,85,	0,1450,11223,13713,
#Deleted in new
chr14	62114352	62117566	chr14:62114352-62117566	7	+	62114352	62114352	16724991	3	109,81,336,	0,1774,2878,
#Partially deleted in new
chr14	62117345	62128397	chr14:62117345-62128397	5	+	62117345	62117345	16724991	3	243,116,375,	0,10451,10677,
#Partially deleted in new
chr14	62117356	62128534	chr14:62117356-62128534	4	+	62117356	62117356	16724991	4	210,124,116,512,	0,1334,10440,10666,
#Partially deleted in new
chr14	62117356	62128414	chr14:62117356-62128414	4	+	62117356	62117356	16724991	4	232,124,116,392,	0,1334,10440,10666,
#Partially deleted in new
chr14	62118144	62128045	chr14:62118144-62128045	4	+	62118144	62118144	16724991	4	289,124,116,23,	0,546,9652,9878,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	62118623	62130962	chr14:62118623-62130962	5	+	62118623	62118623	16724991	3	191,116,2940,	0,9173,9399,
#Deleted in new
chr14	62127243	62128537	chr14:62127243-62128537	4	+	62127243	62127243	16724991	2	669,515,	0,779,
#Partially deleted in new
chr14	62134148	62139973	chr14:62134148-62139973	3	-	62134148	62134148	789624	2	230,65,	0,5760,
#Partially deleted in new
chr14	62150655	62152258	chr14:62150655-62152258	7	-	62150655	62150655	16724991	2	671,395,	0,1208,
#Partially deleted in new
chr14	62514871	62515123	chr14:62514871-62515123	7	-	62514871	62514871	16724991	1	252,	0,
#Deleted in new
chr14	62604112	62605717	chr14:62604112-62605717	7	-	62604112	62604112	16724991	1	1605,	0,
#Partially deleted in new
chr14	62699453	63045455	chr14:62699453-63045455	3	-	62707507	63045186	789624	11	9002,197,253,200,427,393,116,129,107,124,342,	0,80274,102875,150199,250679,281418,287618,301877,306912,317377,345660,
#Partially deleted in new
chr14	62707566	63045186	chr14:62707566-63045186	1	-	62708441	63045186	789624	10	889,253,200,427,393,116,129,107,124,73,	0,94762,142086,242566,273305,279505,293764,298799,309264,337547,
#Partially deleted in new
chr14	62712239	63101866	chr14:62712239-63101866	1	-	62712686	63016853	789624	11	477,197,253,200,427,393,116,129,107,124,67,	0,67488,90089,137413,237893,268632,274832,289091,294126,304591,389560,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	62949817	63102037	chr14:62949817-63102037	0	-	62949817	62949817	8553170	7	742,393,116,129,107,124,238,	0,31054,37254,51513,56548,67013,151982,
#Deleted in new
chr14	63123006	63123201	chr14:63123006-63123201	7	+	63123006	63123006	16724991	1	195,	0,
#Partially deleted in new
chr14	63123032	63128214	chr14:63123032-63128214	3	-	63123032	63123032	8553170	2	728,86,	0,5096,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	63204113	63293219	chr14:63204113-63293219	0	+	63204869	63291184	789624	5	934,59,66,486,292,	0,64996,76857,86912,88814,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	63204407	63293219	chr14:63204407-63293219	3	+	63204869	63291024	789624	5	640,59,165,96,2342,	0,64702,76563,78713,86470,
#Partially deleted in new
chr14	63204684	63269326	chr14:63204684-63269326	0	+	63204684	63204684	8553170	2	363,217,	0,64425,
#Partially deleted in new
chr14	63204858	63283255	chr14:63204858-63283255	1	+	63204869	63283255	789624	4	189,59,165,135,	0,64251,76112,78262,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	63298125	63299547	chr14:63298125-63299547	3	-	63298125	63298125	8553170	2	655,225,	0,1197,
#Partially deleted in new
chr14	63312834	63318879	chr14:63312834-63318879	3	-	63312927	63317849	789624	3	282,205,56,	0,4811,5989,
#Partially deleted in new
chr14	63312927	63317849	chr14:63312927-63317849	1	-	63312927	63317849	789624	2	189,204,	0,4718,
#Partially deleted in new
chr14	63371356	63543374	chr14:63371356-63543374	3	-	63376008	63539685	789624	14	4752,102,128,120,51,54,109,60,131,93,102,197,164,596,	0,10699,13087,18255,20460,20615,22463,23869,25229,43783,50636,82332,168172,171422,
#Partially deleted in new
chr14	63373891	63508238	chr14:63373891-63508238	1	-	63376008	63453814	789624	13	2217,102,128,120,51,54,109,60,131,93,102,197,114,	0,8164,10552,15720,17925,18080,19928,21334,22694,41248,48101,79797,134233,
#Partially deleted in new
chr14	63375760	63543298	chr14:63375760-63543298	1	-	63376008	63539685	789624	14	348,87,128,120,51,54,109,60,131,93,102,197,164,520,	0,6310,8683,13851,16056,16211,18059,19465,20825,39379,46232,77928,163768,167018,
#Partially deleted in new
chr14	63375904	63508238	chr14:63375904-63508238	0	-	63375904	63375904	8553170	13	204,102,128,120,51,54,109,60,131,93,102,197,114,	0,6151,8539,13707,15912,16067,17915,19321,20681,39235,46088,77784,132220,
#Partially deleted in new
chr14	63382055	63543354	chr14:63382055-63543354	0	-	63382055	63382055	789624	12	102,128,120,51,54,109,60,131,93,102,164,576,	0,2388,7556,9761,9916,11764,13170,14530,33084,39937,157473,160723,
#Partially deleted in new
chr14	63384530	63453776	chr14:63384530-63453776	0	-	63384530	63384530	8553170	8	41,120,109,60,131,93,102,88,	0,5081,9289,10695,12055,30609,37462,69158,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	63451273	63543373	chr14:63451273-63543373	0	-	63451273	63451273	8553170	3	2612,164,595,	0,88255,91505,
#Deleted in new
chr14	63479271	63479413	chr14:63479271-63479413	3	+	63479271	63479271	8553170	1	142,	0,
#Deleted in new
chr14	63543568	63544664	chr14:63543568-63544664	3	+	63543568	63543568	8553170	1	1096,	0,
#Deleted in new
chr14	63567957	63568308	chr14:63567957-63568308	7	+	63567957	63567957	16724991	1	351,	0,
#Deleted in new
chr14	63594030	63595291	chr14:63594030-63595291	7	-	63594030	63594030	16724991	1	1261,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	63597038	63641861	chr14:63597038-63641861	3	-	63598778	63599942	789624	2	2935,58,	0,44765,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	63597039	63599974	chr14:63597039-63599974	1	-	63598778	63599942	789624	1	2935,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	63598501	63641407	chr14:63598501-63641407	1	-	63598778	63599942	789624	3	1472,106,109,	0,26426,42797,
#Deleted in new
chr14	63598873	63599248	chr14:63598873-63599248	3	+	63598873	63598873	8553170	2	137,146,	0,229,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	63599262	63641853	chr14:63599262-63641853	0	-	63599262	63599942	789624	4	711,106,109,50,	0,25665,42036,42541,
#Deleted in new
chr14	63601508	63601814	chr14:63601508-63601814	7	+	63601508	63601508	16724991	1	306,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	63621759	63621871	chr14:63621759-63621871	3	+	63621759	63621759	8553170	1	112,	0,
#Deleted in new
chr14	63630677	63630781	chr14:63630677-63630781	3	+	63630677	63630677	8553170	1	104,	0,
#Deleted in new
chr14	63642142	63642696	chr14:63642142-63642696	3	+	63642142	63642142	8553170	1	554,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	63651295	63651499	chr14:63651295-63651499	3	-	63651295	63651295	8553170	1	204,	0,
#Partially deleted in new
chr14	63684213	63728039	chr14:63684213-63728039	3	-	63686104	63727944	789624	3	2443,90,779,	0,14355,43047,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	63734696	63735923	chr14:63734696-63735923	7	+	63734696	63734696	16724991	1	1227,	0,
#Partially deleted in new
chr14	63736443	63736505	chr14:63736443-63736505	3	+	63736443	63736443	8553170	1	62,	0,
#Deleted in new
chr14	63762012	63762149	chr14:63762012-63762149	7	+	63762012	63762012	16724991	1	137,	0,
#Partially deleted in new
chr14	63808545	63808732	chr14:63808545-63808732	7	+	63808545	63808545	16724991	1	187,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	63848260	63848362	chr14:63848260-63848362	3	-	63848260	63848260	8553170	1	102,	0,
#Partially deleted in new
chr14	63852982	64226433	chr14:63852982-64226433	1	+	63909148	64225526	0	115	161,130,62,96,78,93,182,197,101,102,138,165,113,163,79,188,165,150,162,159,174,135,159,212,91,110,127,158,148,611,180,151,159,162,102,201,172,113,203,120,292,152,310,165,342,156,266,2101,323,145,219,266,169,156,141,183,138,186,123,183,132,198,75,111,117,231,183,135,122,142,132,153,210,102,120,201,174,132,197,133,183,147,177,156,153,171,131,205,180,126,155,145,95,235,195,126,156,159,167,163,188,151,183,138,195,277,140,115,203,201,129,192,87,50,1115,	0,56115,87631,88712,88902,89068,96842,101736,108542,110916,114726,123580,124922,125869,127671,128003,129647,130754,133473,137428,137959,140852,142061,143964,144318,145236,145931,147579,148951,149737,154060,156983,163490,164612,167009,168332,168874,169768,171274,171929,172147,173596,174501,176912,178033,195017,196628,198574,202961,209768,212449,217662,220985,222962,225483,227473,228460,234688,236591,237883,240366,244966,245764,248949,254508,260358,266444,267944,269029,269303,272096,273344,273615,275469,276799,277065,279282,281086,284804,286958,288358,288959,290789,293085,299581,305642,306329,309089,310419,312302,314250,314512,315894,317245,321961,324375,333441,335567,337088,349818,355775,356445,356959,358978,359828,361211,363265,365415,366225,367454,368593,370206,371478,372013,372336,
#Partially deleted in new
chr14	63852982	64226432	chr14:63852982-64226432	1	+	63909148	64225564	789624	116	161,130,62,96,78,93,182,197,101,102,138,165,113,163,79,188,165,150,162,159,174,135,159,212,91,110,127,158,148,611,180,151,159,162,102,201,172,113,203,120,292,152,310,165,342,99,156,266,2101,323,145,219,266,169,156,141,183,138,186,123,183,132,198,75,57,117,231,183,135,122,82,153,210,120,201,174,132,215,133,183,147,177,156,153,171,131,205,180,155,145,95,94,111,195,126,159,150,167,13,205,79,163,188,151,174,138,144,277,177,203,201,129,192,87,63,1114,	0,56115,87631,88712,88902,89068,96842,101736,108542,110916,114726,123580,124922,125869,127671,128003,129647,130754,133473,137428,137959,140852,142061,143964,144318,145236,145931,147579,148951,149737,154060,156983,163490,164612,167009,168332,168874,169768,171274,171929,172147,173596,174501,176912,178033,181511,195017,196628,198574,202961,209768,212449,217662,220985,222962,225483,227473,228460,234688,236591,237883,240366,244966,245764,249003,254508,260358,266444,267944,269029,272146,273344,273615,276799,277065,279282,281086,284804,286958,288358,288959,290789,293085,299581,305642,306329,309089,310419,314250,314512,315894,317245,320916,321961,324375,335567,335877,337088,337619,337933,349204,349818,355775,356445,356968,358978,359828,361211,363265,366225,367454,368593,370206,371478,372000,372336,
#Partially deleted in new
chr14	63852982	64226432	chr14:63852982-64226432	3	+	63909148	64225526	0	116	161,130,62,96,78,93,182,197,101,102,138,165,113,163,79,188,165,150,162,159,174,135,159,212,91,110,127,158,148,611,180,151,159,162,102,201,172,113,203,120,292,152,310,165,342,156,266,2101,323,145,219,266,169,156,141,183,138,186,123,183,132,198,75,111,117,231,183,135,122,142,132,153,210,102,120,201,174,132,197,133,183,147,177,156,153,171,131,205,180,126,155,145,95,235,195,126,156,159,167,163,188,151,183,138,195,277,69,140,115,203,201,129,192,87,47,1114,	0,56115,87631,88712,88902,89068,96842,101736,108542,110916,114726,123580,124922,125869,127671,128003,129647,130754,133473,137428,137959,140852,142061,143964,144318,145236,145931,147579,148951,149737,154060,156983,163490,164612,167009,168332,168874,169768,171274,171929,172147,173596,174501,176912,178033,195017,196628,198574,202961,209768,212449,217662,220985,222962,225483,227473,228460,234688,236591,237883,240366,244966,245764,248949,254508,260358,266444,267944,269029,269303,272096,273344,273615,275469,276799,277065,279282,281086,284804,286958,288358,288959,290789,293085,299581,305642,306329,309089,310419,312302,314250,314512,315894,317245,321961,324375,333441,335567,337088,349818,355775,356445,356959,358978,359828,361211,362303,363265,365415,366225,367454,368593,370206,371478,372016,372336,
#Partially deleted in new
chr14	63852991	63960877	chr14:63852991-63960877	1	+	63909148	63960806	0	9	152,130,62,96,78,93,182,197,142,	0,56106,87622,88703,88893,89059,96833,101727,107744,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	63864387	63874006	chr14:63864387-63874006	0	+	63864387	63864387	8553170	2	82,590,	0,9029,
#Partially deleted in new
chr14	63909097	64225564	chr14:63909097-64225564	1	+	63909148	64225564	789624	115	130,62,96,78,93,182,197,101,102,138,165,113,163,79,188,165,150,162,159,174,135,159,212,91,110,127,158,148,611,180,151,159,162,102,201,172,113,203,120,292,152,310,165,342,99,156,266,2101,323,145,219,266,169,156,141,183,138,186,123,183,132,198,75,57,117,231,183,135,122,82,153,210,120,201,174,132,197,133,183,147,177,156,153,171,131,205,180,155,145,95,94,111,195,126,159,150,167,13,205,79,163,188,151,174,138,144,277,177,203,201,129,192,87,63,246,	0,31516,32597,32787,32953,40727,45621,52427,54801,58611,67465,68807,69754,71556,71888,73532,74639,77358,81313,81844,84737,85946,87849,88203,89121,89816,91464,92836,93622,97945,100868,107375,108497,110894,112217,112759,113653,115159,115814,116032,117481,118386,120797,121918,125396,138902,140513,142459,146846,153653,156334,161547,164870,166847,169368,171358,172345,178573,180476,181768,184251,188851,189649,192888,198393,204243,210329,211829,212914,216031,217229,217500,220684,220950,223167,224971,228689,230843,232243,232844,234674,236970,243466,249527,250214,252974,254304,258135,258397,259779,261130,264801,265846,268260,279452,279762,280973,281504,281818,293089,293703,299660,300330,300853,302863,303713,305096,307150,310110,311339,312478,314091,315363,315885,316221,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr14	64003023	64049279	chr14:64003023-64049279	0	+	64003023	64003023	8553170	16	307,180,151,159,162,102,201,172,1709,120,292,152,310,165,342,1280,	0,4019,6942,13449,14571,16968,18291,18833,19727,21888,22106,23555,24460,26871,27992,44976,
#Partially deleted in new
chr14	64062781	64226432	chr14:64062781-64226432	1	+	64062781	64225526	789624	67	114,219,266,169,156,141,183,138,186,123,183,132,198,75,111,117,231,183,135,122,142,132,153,210,102,120,201,174,132,197,133,183,147,177,156,153,171,131,205,180,126,155,145,95,235,195,126,156,159,167,163,188,151,183,138,195,277,69,140,115,203,201,129,192,87,47,1114,	0,2650,7863,11186,13163,15684,17674,18661,24889,26792,28084,30567,35167,35965,39150,44709,50559,56645,58145,59230,59504,62297,63545,63816,65670,67000,67266,69483,71287,75005,77159,78559,79160,80990,83286,89782,95843,96530,99290,100620,102503,104451,104713,106095,107446,112162,114576,123642,125768,127289,140019,145976,146646,147160,149179,150029,151412,152504,153466,155616,156426,157655,158794,160407,161679,162217,162537,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	64073987	64100360	chr14:64073987-64100360	0	+	64073987	64073987	8553170	11	149,156,141,183,138,186,123,183,132,198,1614,	0,1957,4478,6468,7455,13683,15586,16878,19361,23961,24759,
#Partially deleted in new
chr14	64075614	64226430	chr14:64075614-64226430	0	+	64075614	64075614	8553170	63	486,141,183,138,69,186,123,183,132,198,75,111,117,231,183,135,122,142,132,153,210,102,120,201,174,132,197,133,183,147,177,156,153,171,131,205,180,126,155,145,95,235,195,126,156,159,167,163,188,151,183,138,195,277,140,115,203,201,129,192,87,50,1112,	0,2851,4841,5828,11804,12056,13959,15251,17734,22334,23132,26317,31876,37726,43812,45312,46397,46671,49464,50712,50983,52837,54167,54433,56650,58454,62172,64326,65726,66327,68157,70453,76949,83010,83697,86457,87787,89670,91618,91880,93262,94613,99329,101743,110809,112935,114456,127186,133143,133813,134327,136346,137196,138579,140633,142783,143593,144822,145961,147574,148846,149381,149704,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	64084231	64294410	chr14:64084231-64294410	1	-	64084916	64282985	789624	9	821,181,134,139,300,117,173,452,378,	0,150738,165314,172994,176217,184563,195749,198392,209801,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	64095023	64095125	chr14:64095023-64095125	3	-	64095023	64095023	5263520	1	102,	0,
#Partially deleted in new
chr14	64098444	64102043	chr14:64098444-64102043	0	+	64098444	64098444	8553170	3	202,75,112,	0,302,3487,
#Partially deleted in new
chr14	64098724	64113572	chr14:64098724-64113572	0	+	64098724	64098724	8553170	4	97,111,117,232,	0,3207,8766,14616,
#Partially deleted in new
chr14	64119429	64122522	chr14:64119429-64122522	1	+	64119429	64122493	789624	4	180,135,122,237,	0,1497,2582,2856,
#Partially deleted in new
chr14	64141437	64226430	chr14:64141437-64226430	0	+	64141437	64208777	789624	36	86,147,177,156,153,171,131,205,180,126,155,145,95,235,195,126,156,159,167,163,235,188,151,183,138,195,277,140,115,203,201,171,192,87,50,1112,	0,504,2334,4630,11126,17187,17874,20634,21964,23847,25795,26057,27439,28790,33506,35920,44986,47112,48633,61363,66520,67320,67990,68504,70523,71373,72756,74810,76960,77770,78999,80096,81751,83023,83558,83881,
#Partially deleted in new
chr14	64158706	64162849	chr14:64158706-64162849	0	+	64158706	64158706	8553170	3	89,131,778,	0,605,3365,
#Partially deleted in new
chr14	64162113	64226432	chr14:64162113-64226432	0	+	64162113	64202887	789624	27	163,180,126,155,145,95,235,195,126,156,159,163,188,151,183,138,195,277,140,115,203,201,129,192,87,50,1114,	0,1288,3171,5119,5381,6763,8114,12830,15244,24310,26436,40687,46644,47314,47828,49847,50697,52080,54134,56284,57094,58323,59462,61075,62347,62882,63205,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	64166785	64168899	chr14:64166785-64168899	0	+	64166785	64166785	8553170	4	249,155,145,23,	0,447,709,2091,
#Partially deleted in new
chr14	64196753	64208945	chr14:64196753-64208945	0	+	64202852	64208945	789624	3	351,126,188,	0,6084,12004,
#Partially deleted in new
chr14	64196783	64209454	chr14:64196783-64209454	0	+	64208922	64209454	789624	3	321,188,27,	0,11974,12644,
#Partially deleted in new
chr14	64204354	64226430	chr14:64204354-64226430	0	+	64204354	64204354	8553170	16	35,188,151,183,138,195,277,140,115,203,201,129,192,87,50,1112,	0,4403,5073,5587,7606,8456,9839,11893,14043,14853,16082,17221,18834,20106,20641,20964,
#Partially deleted in new
chr14	64209119	64226430	chr14:64209119-64226430	0	+	64209119	64209119	8553170	14	459,183,138,195,277,140,115,203,201,129,192,87,50,1112,	0,822,2841,3691,5074,7128,9278,10088,11317,12456,14069,15341,15876,16199,
#Partially deleted in new
chr14	64209607	64212866	chr14:64209607-64212866	0	+	64209607	64209607	8553170	3	517,138,56,	0,2353,3203,
#Deleted in new
chr14	64212810	64214524	chr14:64212810-64214524	0	+	64212810	64212810	8553170	2	195,331,	0,1383,
#Partially deleted in new
chr14	64214143	64226432	chr14:64214143-64226432	0	+	64214235	64225526	0	11	327,69,140,115,203,201,171,192,87,50,1114,	0,1142,2104,4254,5064,6293,7390,9045,10317,10852,11175,
#Partially deleted in new
chr14	64214143	64219314	chr14:64214143-64219314	0	+	64214235	64219314	789624	4	327,140,115,107,	0,2104,4254,5064,
#Partially deleted in new
chr14	64215431	64226430	chr14:64215431-64226430	0	+	64215431	64215431	8553170	9	956,115,203,201,171,192,87,47,1112,	0,2966,3776,5005,6102,7757,9029,9567,9887,
#Partially deleted in new
chr14	64216321	64225526	chr14:64216321-64225526	1	+	64216321	64225526	0	9	66,115,203,201,171,192,87,47,208,	0,2076,2886,4115,5212,6867,8139,8677,8997,
#Partially deleted in new
chr14	64218231	64223380	chr14:64218231-64223380	0	+	64218231	64218231	8553170	5	281,203,201,171,192,	0,976,2205,3302,4957,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	64226706	64338096	chr14:64226706-64338096	1	-	64227532	64282985	0	14	908,181,134,139,300,117,173,452,186,94,213,184,308,199,	0,8263,22839,30519,33742,42088,53274,55917,70826,71684,74661,76769,109706,111191,
#Partially deleted in new
chr14	64227034	64294410	chr14:64227034-64294410	1	-	64227532	64282985	0	9	580,181,134,139,300,117,173,452,378,	0,7935,22511,30191,33414,41760,52946,55589,66998,
#Partially deleted in new
chr14	64227426	64338112	chr14:64227426-64338112	1	-	64227532	64282985	0	9	188,181,134,139,300,117,173,452,215,	0,7543,22119,29799,33022,41368,52554,55197,110471,
#Partially deleted in new
chr14	64227452	64282985	chr14:64227452-64282985	1	-	64227889	64282985	0	8	477,181,134,139,300,117,173,362,	0,7517,22093,29773,32996,41342,52528,55171,
#Partially deleted in new
chr14	64227505	64283036	chr14:64227505-64283036	0	-	64249659	64282985	0	7	109,181,134,300,117,173,413,	0,7464,22040,32943,41289,52475,55118,
#Partially deleted in new
chr14	64227817	64282985	chr14:64227817-64282985	1	-	64228026	64282985	0	8	228,181,134,139,300,117,173,362,	0,7152,21728,29408,32631,40977,52163,54806,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	64230917	64282985	chr14:64230917-64282985	1	-	64234956	64282985	0	7	4233,134,139,300,117,173,362,	0,18628,26308,29531,37877,49063,51706,
#Partially deleted in new
chr14	64233028	64283075	chr14:64233028-64283075	1	-	64233136	64282985	0	6	295,181,300,117,173,452,	0,1941,27420,35766,46952,49595,
#Partially deleted in new
chr14	64233028	64282842	chr14:64233028-64282842	0	-	64233028	64233028	789624	7	295,181,134,190,300,117,219,	0,1941,16517,24197,27420,35766,49595,
#Partially deleted in new
chr14	64233069	64282813	chr14:64233069-64282813	0	-	64233069	64233069	8553170	6	254,181,300,117,173,190,	0,1900,27379,35725,46911,49554,
#Partially deleted in new
chr14	64233087	64294360	chr14:64233087-64294360	3	-	64233136	64282985	0	9	236,181,134,139,300,117,173,452,328,	0,1882,16458,24138,27361,35707,46893,49536,60945,
#Partially deleted in new
chr14	64235062	64260527	chr14:64235062-64260527	0	-	64235062	64235062	8553170	3	88,139,79,	0,22163,25386,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	64329430	64336569	chr14:64329430-64336569	3	-	64329430	64329430	8553170	3	1491,103,157,	0,2782,6982,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	64329531	64338639	chr14:64329531-64338639	0	-	64329531	64329531	8553170	2	1390,742,	0,8366,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	64335834	64338599	chr14:64335834-64338599	1	-	64335834	64335834	8553170	3	886,129,702,	0,1566,2063,
#Partially deleted in new
chr14	64341674	64379327	chr14:64341674-64379327	4	-	64341674	64341674	16724991	8	101,246,126,202,324,142,256,91,	0,4508,5848,13046,15505,19435,32721,37562,
#Partially deleted in new
chr14	64346170	64374666	chr14:64346170-64374666	5	-	64346170	64346170	16724991	6	261,234,198,291,228,264,	0,1356,8554,11009,14858,28232,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	64346321	64387053	chr14:64346321-64387053	4	-	64346321	64346321	16724991	6	107,126,202,324,142,465,	0,1201,8399,10858,14788,40267,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	64349676	64352284	chr14:64349676-64352284	3	-	64349676	64349676	8553170	2	1581,490,	0,2118,
#Deleted in new
chr14	64361391	64361637	chr14:64361391-64361637	7	+	64361391	64361391	16724991	1	246,	0,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr14	64388030	64463457	chr14:64388030-64463457	1	+	64388259	64459935	789624	27	438,85,60,54,137,101,137,112,128,98,174,137,47,108,75,103,77,141,69,112,140,42,101,178,108,153,3699,	0,12762,23059,24441,27327,27608,29857,31783,36773,37699,37988,39306,42153,43501,43756,47538,51065,52095,53354,54023,54232,56662,60186,61414,65723,66692,71728,
#Partially deleted in new
chr14	64388239	64418024	chr14:64388239-64418024	0	+	64388259	64418024	789624	7	229,85,60,54,137,101,137,	0,12553,22850,24232,27118,27399,29648,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	64388307	64415429	chr14:64388307-64415429	0	+	64415360	64415429	789624	7	161,125,131,85,60,54,72,	0,693,2029,12485,22782,24164,27050,
#Partially deleted in new
chr14	64388307	64415435	chr14:64388307-64415435	0	+	64415360	64415435	789624	6	161,125,85,60,54,78,	0,693,12485,22782,24164,27050,
#Partially deleted in new
chr14	64388310	64440447	chr14:64388310-64440447	0	+	64388310	64388310	8553170	17	158,85,54,137,101,137,112,128,98,174,137,47,108,75,103,77,322,	0,12482,24161,27047,27328,29577,31503,36493,37419,37708,39026,41873,43221,43476,47258,50785,51815,
#Partially deleted in new
chr14	64388349	64460004	chr14:64388349-64460004	3	+	64388427	64458303	789624	28	119,85,60,54,137,101,137,112,128,98,174,137,47,108,75,103,77,141,69,112,140,42,101,178,108,153,94,246,	0,12443,22740,24122,27008,27289,29538,31464,36454,37380,37669,38987,41834,43182,43437,47219,50746,51776,53035,53704,53913,56343,59867,61095,65404,66373,69864,71409,
#Partially deleted in new
chr14	64388726	64415710	chr14:64388726-64415710	0	+	64415360	64415710	789624	6	101,85,60,54,137,72,	0,12066,22363,23745,26631,26912,
#Partially deleted in new
chr14	64419202	64426192	chr14:64419202-64426192	0	+	64419202	64419202	8553170	5	48,112,128,98,174,	0,611,5601,6527,6816,
#Partially deleted in new
chr14	64422934	64448557	chr14:64422934-64448557	3	-	64422934	64422934	8553170	2	45,505,	0,25118,
#Partially deleted in new
chr14	64424214	64427473	chr14:64424214-64427473	0	+	64424214	64424214	8553170	5	31,128,98,174,137,	0,589,1515,1804,3122,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	64431827	64441812	chr14:64431827-64441812	0	+	64431827	64431827	8553170	5	34,103,77,141,428,	0,3741,7268,8298,9557,
#Partially deleted in new
chr14	64435566	64439376	chr14:64435566-64439376	0	+	64435566	64435566	8553170	2	105,281,	0,3529,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	64440220	64445138	chr14:64440220-64445138	0	+	64440220	64440220	8553170	5	46,69,112,140,446,	0,1164,1833,2042,4472,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	64440368	64442238	chr14:64440368-64442238	3	-	64440368	64440368	8553170	1	1870,	0,
#Partially deleted in new
chr14	64441247	64453807	chr14:64441247-64453807	0	+	64441247	64441247	8553170	7	206,112,140,42,101,178,54,	0,806,1015,3445,6969,8197,12506,
#Partially deleted in new
chr14	64449105	64505213	chr14:64449105-64505213	1	-	64449550	64490533	789624	3	533,180,727,	0,41255,55381,
#Partially deleted in new
chr14	64449329	64490533	chr14:64449329-64490533	1	-	64449609	64490533	789624	3	309,83,173,	0,37784,41031,
#Partially deleted in new
chr14	64449500	64459982	chr14:64449500-64459982	0	+	64449500	64449500	8553170	6	122,108,153,94,231,224,	0,4253,5222,8713,8928,10258,
#Partially deleted in new
chr14	64449610	64455173	chr14:64449610-64455173	0	+	64449610	64454926	789624	3	12,108,451,	0,4143,5112,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	64457996	64460003	chr14:64457996-64460003	0	+	64457996	64457996	8553170	2	311,245,	0,1762,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	64465498	64474503	chr14:64465498-64474503	3	+	64468394	64469678	0	2	115,6372,	0,2633,
#Deleted in new
chr14	64467106	64469707	chr14:64467106-64469707	1	+	64468394	64469678	0	1	2601,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	64478050	64503845	chr14:64478050-64503845	3	-	64486922	64490533	789624	3	10007,180,185,	0,12310,25610,
#Deleted in new
chr14	64503711	64504854	chr14:64503711-64504854	0	+	64503711	64503711	8553170	2	380,73,	0,1070,
#Partially deleted in new
chr14	64503724	64521970	chr14:64503724-64521970	0	+	64521504	64521970	789624	2	98,484,	0,17762,
#Partially deleted in new
chr14	64503950	64521895	chr14:64503950-64521895	0	+	64521504	64521895	789624	2	100,409,	0,17536,
#Partially deleted in new
chr14	64503984	64523898	chr14:64503984-64523898	3	+	64521504	64523646	789624	4	107,170,136,2412,	0,792,7264,17502,
#Partially deleted in new
chr14	64504573	64533690	chr14:64504573-64533690	1	+	64521504	64531897	789624	3	373,1916,1830,	0,16913,27287,
#Partially deleted in new
chr14	64504725	64521606	chr14:64504725-64521606	0	+	64521504	64521606	789624	4	221,136,152,120,	0,6523,11874,16761,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	64513951	64539621	chr14:64513951-64539621	3	-	64513951	64513951	8553170	4	430,182,96,474,	0,4405,18522,25196,
#Partially deleted in new
chr14	64514153	64540368	chr14:64514153-64540368	0	-	64514153	64514153	789624	4	228,182,96,52,	0,4203,18320,26163,
#Partially deleted in new
chr14	64535701	64535879	chr14:64535701-64535879	7	-	64535701	64535701	16724991	1	178,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	64535904	64546173	chr14:64535904-64546173	3	+	64540849	64542769	0	2	71,5329,	0,4940,
#Deleted in new
chr14	64540467	64543234	chr14:64540467-64543234	1	+	64540849	64542769	0	1	2767,	0,
#Deleted in new
chr14	64540740	64541575	chr14:64540740-64541575	0	+	64540740	64540740	8553170	2	218,239,	0,596,
#Partially deleted in new
chr14	64549901	64589378	chr14:64549901-64589378	3	+	64549997	64589338	789624	12	165,65,48,87,98,67,99,135,43,179,192,227,	0,1019,2912,14849,15455,15724,18447,24553,36935,37292,38202,39250,
#Partially deleted in new
chr14	64549919	64564825	chr14:64549919-64564825	0	+	64549997	64561830	789624	5	147,65,48,241,75,	0,1001,2894,11868,14831,
#Partially deleted in new
chr14	64549939	64589357	chr14:64549939-64589357	0	+	64549997	64551637	789624	13	127,65,54,48,87,98,67,99,135,43,179,192,206,	0,981,1694,2874,14811,15417,15686,18409,24515,36897,37254,38164,39212,
#Partially deleted in new
chr14	64550208	64568447	chr14:64550208-64568447	0	+	64565657	64568447	789624	8	78,65,54,48,87,98,67,99,	0,712,1425,2605,14542,15148,15417,18140,
#Partially deleted in new
chr14	64552693	64596513	chr14:64552693-64596513	3	-	64552693	64552693	8553170	3	151,162,52,	0,6671,43768,
#Partially deleted in new
chr14	64552695	64596536	chr14:64552695-64596536	0	-	64552695	64552695	8553170	2	193,75,	0,43766,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	64586107	64589380	chr14:64586107-64589380	0	+	64586107	64586107	8553170	3	1265,192,229,	0,1996,3044,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	64586824	64588565	chr14:64586824-64588565	0	+	64586824	64586824	8553170	3	55,179,462,	0,369,1279,
#Deleted in new
chr14	64600242	64601644	chr14:64600242-64601644	7	-	64600242	64600242	16724991	1	1402,	0,
#Partially deleted in new
chr14	64704101	64730688	chr14:64704101-64730688	0	+	64727631	64730688	789624	5	30,390,98,70,47,	0,23491,24894,26141,26540,
#Partially deleted in new
chr14	64704435	64741495	chr14:64704435-64741495	0	+	64727631	64741495	789624	14	269,390,47,151,132,183,93,87,34,99,39,20,114,460,	0,23157,26206,26363,26602,26925,27278,27659,27991,28367,32417,32920,34306,36600,
#Partially deleted in new
chr14	64704474	64744339	chr14:64704474-64744339	1	+	64727631	64743703	789624	15	230,390,47,151,132,183,93,87,34,99,39,20,114,1420,1358,	0,23118,26167,26324,26563,26886,27239,27620,27952,28328,32378,32881,34267,36561,38507,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr14	64704596	64750247	chr14:64704596-64750247	3	+	64727631	64743703	789624	17	108,390,98,70,47,151,132,183,93,87,34,99,39,20,114,1420,7266,	0,22996,24399,25646,26045,26202,26441,26764,27117,27498,27830,28206,32256,32759,34145,36439,38385,
#Partially deleted in new
chr14	64715702	64727756	chr14:64715702-64727756	0	+	64716068	64727756	789624	2	390,164,	0,11890,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	64723780	64730278	chr14:64723780-64730278	0	+	64727631	64730278	789624	4	134,390,98,36,	0,3812,5215,6462,
#Partially deleted in new
chr14	64727883	64730688	chr14:64727883-64730688	0	+	64727883	64727883	8553170	3	99,98,47,	0,1112,2758,
#Partially deleted in new
chr14	64730649	64744339	chr14:64730649-64744339	0	+	64730649	64730649	8553170	11	39,151,132,446,87,34,99,523,114,1420,1358,	0,149,388,711,1445,1777,2153,6203,8092,10386,12332,
#Partially deleted in new
chr14	64738014	64744343	chr14:64738014-64744343	1	+	64738221	64743703	789624	4	210,114,1420,1362,	0,727,3021,4967,
#Partially deleted in new
chr14	64738034	64744345	chr14:64738034-64744345	1	+	64738822	64743703	789624	4	103,114,1420,1364,	0,707,3001,4947,
#Deleted in new
chr14	64741595	64744342	chr14:64741595-64744342	0	+	64741595	64741595	8553170	2	189,273,	0,2474,
#Partially deleted in new
chr14	64746282	64879883	chr14:64746282-64879883	1	-	64749305	64823094	0	36	3191,43,174,257,76,50,197,85,139,245,375,205,131,279,90,207,264,147,91,203,757,138,871,151,303,159,118,188,113,116,81,92,174,152,199,92,	0,3371,3698,7254,20443,21020,21380,22751,23307,24602,26297,26937,28114,28842,32874,33442,36007,37964,39254,39466,40121,45436,46714,48184,49054,50274,51446,53464,54473,55002,55471,55943,57324,58656,76664,133509,
#Partially deleted in new
chr14	64746282	64879907	chr14:64746282-64879907	3	-	64749305	64823094	0	36	3191,43,174,257,76,50,197,85,139,245,375,205,131,279,90,207,264,147,91,203,757,138,871,151,303,159,118,188,113,116,81,92,174,152,199,116,	0,3371,3698,7254,20443,21020,21380,22751,23307,24602,26297,26937,28114,28842,32874,33442,36007,37964,39254,39466,40121,45436,46714,48184,49054,50274,51446,53464,54473,55002,55471,55943,57324,58656,76664,133509,
#Partially deleted in new
chr14	64746283	64823148	chr14:64746283-64823148	1	-	64749305	64823094	0	35	3190,43,174,257,76,50,197,85,139,245,375,205,131,279,90,207,264,147,91,203,757,138,871,151,303,159,118,188,113,116,81,92,174,152,202,	0,3370,3697,7253,20442,21019,21379,22750,23306,24601,26296,26936,28113,28841,32873,33441,36006,37963,39253,39465,40120,45435,46713,48183,49053,50273,51445,53463,54472,55001,55470,55942,57323,58655,76663,
#Partially deleted in new
chr14	64748936	64782550	chr14:64748936-64782550	0	-	64749305	64782550	789624	18	537,43,174,105,257,76,50,197,85,139,245,375,205,131,279,90,207,261,	0,717,1044,3274,4600,17789,18366,18726,20097,20653,21948,23643,24283,25460,26188,30220,30788,33353,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	64748954	64757541	chr14:64748954-64757541	0	-	64748954	64748954	8553170	4	519,43,174,4005,	0,699,1026,4582,
#Partially deleted in new
chr14	64749162	64763840	chr14:64749162-64763840	0	-	64749162	64749162	8553170	5	311,43,174,257,82,	0,491,818,4374,14596,
#Partially deleted in new
chr14	64766398	64879907	chr14:64766398-64879907	1	-	64766656	64823094	0	32	403,50,197,85,139,245,375,205,131,279,90,207,264,147,91,203,757,138,871,151,303,159,118,188,113,116,81,92,174,152,199,116,	0,904,1264,2635,3191,4486,6181,6821,7998,8726,12758,13326,15891,17848,19138,19350,20005,25320,26598,28068,28938,30158,31330,33348,34357,34886,35355,35827,37208,38540,56548,113393,
#Partially deleted in new
chr14	64766398	64879837	chr14:64766398-64879837	1	-	64766656	64823094	0	32	403,50,197,85,139,245,375,205,131,279,90,207,264,147,91,203,757,138,871,151,303,159,118,188,113,116,81,92,174,152,199,46,	0,904,1264,2635,3191,4486,6181,6821,7998,8726,12758,13326,15891,17848,19138,19350,20005,25320,26598,28068,28938,30158,31330,33348,34357,34886,35355,35827,37208,38540,56548,113393,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	64767323	64768213	chr14:64767323-64768213	0	-	64767323	64767323	8553170	2	29,551,	0,339,
#Deleted in new
chr14	64785625	64785686	chr14:64785625-64785686	3	-	64785625	64785625	5263520	1	61,	0,
#Deleted in new
chr14	64909487	64909780	chr14:64909487-64909780	3	-	64909487	64909487	8553170	1	293,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	64914360	64934385	chr14:64914360-64934385	1	+	64914414	64932230	0	4	174,136,71,2248,	0,9630,11649,17777,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	64914360	64935368	chr14:64914360-64935368	3	+	64914414	64932230	0	4	174,136,74,3231,	0,9630,11646,17777,
#Partially deleted in new
chr14	64914414	64932320	chr14:64914414-64932320	1	+	64914414	64932199	0	3	120,136,183,	0,9576,17723,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	64914423	64934385	chr14:64914423-64934385	1	+	64914495	64932230	789624	4	111,136,71,2248,	0,9567,11586,17714,
#Partially deleted in new
chr14	64914442	64944591	chr14:64914442-64944591	0	+	64914442	64943321	789624	3	92,136,1293,	0,9548,28856,
#Partially deleted in new
chr14	64914457	64924484	chr14:64914457-64924484	0	+	64914457	64914457	8553170	2	77,494,	0,9533,
#Partially deleted in new
chr14	64914476	64944056	chr14:64914476-64944056	0	+	64914476	64943412	789624	4	58,136,71,758,	0,9514,11533,28822,
#Partially deleted in new
chr14	64914484	65061803	chr14:64914484-65061803	0	+	64914484	65012388	789624	13	50,136,65,73,92,147,84,87,130,133,112,115,623,	0,9506,89764,97832,101140,112968,113213,118125,126305,129826,138753,140090,146696,
#Partially deleted in new
chr14	64914492	65061361	chr14:64914492-65061361	3	+	64914495	65061312	789624	14	42,136,71,65,73,92,147,84,87,130,133,112,115,181,	0,9498,11517,89756,97824,101132,112960,113205,118117,126297,129818,138745,140082,146688,
#Partially deleted in new
chr14	64924009	64930937	chr14:64924009-64930937	0	+	64924009	64930898	789624	3	117,71,138,	0,2000,6790,
#Partially deleted in new
chr14	64924035	65015683	chr14:64924035-65015683	0	+	64924035	64932230	789624	6	91,74,155,65,73,59,	0,1971,8102,80213,88281,91589,
#Partially deleted in new
chr14	64924035	65015675	chr14:64924035-65015675	0	+	64924035	65015675	789624	3	91,65,51,	0,80213,91589,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	64939151	64942745	chr14:64939151-64942745	0	-	64940183	64942726	789624	3	687,206,241,	0,841,3353,
#Partially deleted in new
chr14	64939152	64942905	chr14:64939152-64942905	1	-	64939487	64942726	789624	3	686,102,296,	0,3352,3457,
#Partially deleted in new
chr14	64939157	64942813	chr14:64939157-64942813	3	-	64939487	64942726	0	2	681,309,	0,3347,
#Partially deleted in new
chr14	64939416	64942720	chr14:64939416-64942720	0	-	64939487	64942720	789624	2	422,54,	0,3250,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	64939507	64942746	chr14:64939507-64942746	0	-	64941506	64942726	789624	3	331,205,242,	0,1809,2997,
#Partially deleted in new
chr14	64945813	64972157	chr14:64945813-64972157	1	-	64948496	64972076	789624	7	2699,66,90,209,61,61,205,	0,2854,4511,5129,5789,6697,26139,
#Partially deleted in new
chr14	64945815	64972414	chr14:64945815-64972414	3	-	64948353	64972076	789624	7	2697,66,90,78,61,61,462,	0,2852,4509,5258,5787,6695,26137,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	64945815	64972197	chr14:64945815-64972197	0	-	64958148	64972076	789624	8	2697,66,90,78,61,61,220,245,	0,2852,4509,5258,5787,6695,12124,26137,
#Partially deleted in new
chr14	64945826	64972778	chr14:64945826-64972778	1	-	64948353	64972760	789624	8	2686,66,90,78,61,61,148,69,	0,2841,4498,5247,5776,6684,26126,26883,
#Partially deleted in new
chr14	64945826	64972776	chr14:64945826-64972776	1	-	64948353	64952557	789624	7	2686,66,90,78,61,61,67,	0,2841,4498,5247,5776,6684,26883,
#Partially deleted in new
chr14	64945826	64972935	chr14:64945826-64972935	1	-	64948353	64972852	789624	9	2686,66,90,78,61,61,148,42,119,	0,2841,4498,5247,5776,6684,26126,26868,26990,
#Partially deleted in new
chr14	64945827	64973226	chr14:64945827-64973226	0	-	64945827	64945827	8553170	7	2685,66,827,61,61,148,532,	0,2840,4497,5775,6683,26125,26867,
#Partially deleted in new
chr14	64945838	64972760	chr14:64945838-64972760	1	-	64948496	64952557	789624	7	2674,66,90,209,61,61,51,	0,2829,4486,5104,5764,6672,26871,
#Partially deleted in new
chr14	64947241	64971894	chr14:64947241-64971894	0	-	64950938	64971894	789624	7	1271,66,90,573,61,61,87,	0,1426,3083,3337,4361,5269,24566,
#Partially deleted in new
chr14	64948676	64950827	chr14:64948676-64950827	0	-	64948676	64948676	8553170	2	57,503,	0,1648,
#Partially deleted in new
chr14	64986719	65062598	chr14:64986719-65062598	3	+	64986953	65061312	0	12	378,65,73,92,147,84,87,130,133,112,115,1418,	0,17529,25597,28905,40733,40978,45890,54070,57591,66518,67855,74461,
#Partially deleted in new
chr14	64986894	65022130	chr14:64986894-65022130	0	+	64986894	64986894	8553170	5	203,65,73,92,149,	0,17354,25422,28730,35087,
#Partially deleted in new
chr14	64987214	65027599	chr14:64987214-65027599	0	+	64987214	64987214	8553170	5	348,65,73,92,147,	0,17034,25102,28410,40238,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	65003324	65003767	chr14:65003324-65003767	3	-	65003324	65003324	8553170	1	443,	0,
#Partially deleted in new
chr14	65006173	65102387	chr14:65006173-65102387	1	-	65006203	65102339	0	4	111,108,27,84,	0,87534,95372,96130,
#Partially deleted in new
chr14	65012171	65032392	chr14:65012171-65032392	0	+	65012171	65012171	8553170	5	218,92,147,84,34,	0,3453,15281,15526,20187,
#Partially deleted in new
chr14	65015537	65062652	chr14:65015537-65062652	0	+	65015537	65015537	8553170	10	179,147,84,163,87,130,133,112,115,1472,	0,11915,12160,16821,17072,25252,28773,37700,39037,45643,
#Partially deleted in new
chr14	65016503	65040827	chr14:65016503-65040827	0	+	65016503	65016503	8553170	6	24,147,68,145,87,38,	0,10949,11194,15855,16106,24286,
#Deleted in new
chr14	65027386	65027781	chr14:65027386-65027781	0	+	65027386	65027386	8553170	2	213,84,	0,311,
#Deleted in new
chr14	65044687	65044769	chr14:65044687-65044769	3	+	65044687	65044687	5263520	1	82,	0,
#Partially deleted in new
chr14	65053159	65061405	chr14:65053159-65061405	0	+	65053159	65053159	8553170	3	190,115,225,	0,1415,8021,
#Partially deleted in new
chr14	65075123	65102504	chr14:65075123-65102504	1	-	65076475	65102339	0	4	1540,124,108,201,	0,2789,18584,27180,
#Partially deleted in new
chr14	65075123	65102544	chr14:65075123-65102544	1	-	65077411	65102339	0	6	1540,101,124,108,27,241,	0,2204,2789,18584,26422,27180,
#Partially deleted in new
chr14	65075126	65102519	chr14:65075126-65102519	0	-	65077411	65102339	0	6	1537,85,124,108,27,216,	0,2217,2786,18581,26419,27177,
#Partially deleted in new
chr14	65075157	65102470	chr14:65075157-65102470	1	-	65076450	65102339	789624	2	1506,167,	0,27146,
#Partially deleted in new
chr14	65075201	65102488	chr14:65075201-65102488	1	-	65077802	65102339	0	4	2835,108,27,185,	0,18506,26344,27102,
#Partially deleted in new
chr14	65075543	65102470	chr14:65075543-65102470	3	-	65076475	65102339	0	5	1120,124,108,27,167,	0,2369,18164,26002,26760,
#Partially deleted in new
chr14	65076085	65102339	chr14:65076085-65102339	1	-	65076475	65102339	789624	4	578,124,27,36,	0,1827,25460,26218,
#Partially deleted in new
chr14	65076457	65102360	chr14:65076457-65102360	0	-	65077411	65102339	0	6	206,101,124,108,27,57,	0,870,1455,17250,25088,25846,
#Partially deleted in new
chr14	65076461	65102690	chr14:65076461-65102690	1	-	65076475	65077933	789624	6	202,85,124,108,27,182,	0,882,1451,17246,25084,26047,
#Partially deleted in new
chr14	65076608	65102695	chr14:65076608-65102695	0	-	65076608	65077988	789624	4	55,124,108,187,	0,1304,17099,25900,
#Partially deleted in new
chr14	65077192	65101685	chr14:65077192-65101685	0	-	65077192	65077192	8553170	3	844,108,140,	0,16515,24353,
#Partially deleted in new
chr14	65077286	65102517	chr14:65077286-65102517	1	-	65077411	65102339	0	5	142,124,108,27,214,	0,626,16421,24259,25017,
#Partially deleted in new
chr14	65077300	65102517	chr14:65077300-65102517	1	-	65077411	65102339	789624	4	128,124,108,214,	0,612,16407,25003,
#Partially deleted in new
chr14	65077384	65102517	chr14:65077384-65102517	1	-	65077411	65102339	789624	5	44,81,124,108,214,	0,178,528,16323,24919,
#Partially deleted in new
chr14	65077773	65102517	chr14:65077773-65102517	1	-	65077802	65102339	789624	3	263,108,214,	0,15934,24530,
#Partially deleted in new
chr14	65083743	65102509	chr14:65083743-65102509	1	-	65084179	65102339	0	4	556,108,27,206,	0,9964,17802,18560,
#Partially deleted in new
chr14	65093497	65102478	chr14:65093497-65102478	0	-	65093497	65093497	8553170	3	318,27,175,	0,8048,8806,
#Partially deleted in new
chr14	65093702	65102517	chr14:65093702-65102517	0	-	65093702	65093702	8553170	2	113,214,	0,8601,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	65124351	65124542	chr14:65124351-65124542	3	-	65124351	65124351	8553170	1	191,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	65212892	65222347	chr14:65212892-65222347	3	-	65212892	65212892	789624	4	1034,90,189,129,	0,4808,5614,9326,
#Deleted in new
chr14	65234514	65235101	chr14:65234514-65235101	7	-	65234514	65234514	16724991	1	587,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	65253700	65318790	chr14:65253700-65318790	1	-	65253700	65253700	8553170	3	206,68,300,	0,15744,64790,
#Partially deleted in new
chr14	65266637	65267690	chr14:65266637-65267690	7	-	65266637	65266637	16724991	2	371,112,	0,941,
#Deleted in new
chr14	65268828	65269098	chr14:65268828-65269098	7	+	65268828	65268828	16724991	1	270,	0,
#Partially deleted in new
chr14	65279266	65281166	chr14:65279266-65281166	7	+	65279266	65279266	16724991	2	1055,546,	0,1354,
#Deleted in new
chr14	65335116	65335183	chr14:65335116-65335183	3	-	65335116	65335116	5263520	1	67,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	65410591	65744121	chr14:65410591-65744121	3	+	65561563	65742410	0	11	1402,98,430,116,163,115,238,247,177,151,2029,	0,45029,150745,205386,205619,218900,258651,311183,313555,322639,331501,
#Partially deleted in new
chr14	65411121	65743142	chr14:65411121-65743142	1	+	65561563	65742410	0	10	872,430,116,163,115,238,247,177,151,1050,	0,150215,204856,205089,218370,258121,310653,313025,322109,330971,
#Deleted in new
chr14	65411169	65412690	chr14:65411169-65412690	3	-	65411169	65411169	789624	1	1521,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	65411862	65561652	chr14:65411862-65561652	0	+	65561563	65561652	789624	4	131,94,98,316,	0,18353,43758,149474,
#Partially deleted in new
chr14	65411864	65743142	chr14:65411864-65743142	0	+	65561563	65733322	0	9	129,98,430,116,163,115,238,151,1050,	0,43756,149472,204113,204346,217627,257378,321366,330228,
#Partially deleted in new
chr14	65411873	65742936	chr14:65411873-65742936	1	+	65629498	65742410	0	10	120,98,116,163,115,238,247,177,151,844,	0,43747,204104,204337,217618,257369,309901,312273,321357,330219,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	65411890	65458188	chr14:65411890-65458188	0	+	65411890	65411890	8553170	3	103,98,295,	0,43730,46003,
#Partially deleted in new
chr14	65411935	65561685	chr14:65411935-65561685	0	+	65561563	65561685	789624	4	58,98,78,349,	0,43685,67771,149401,
#Partially deleted in new
chr14	65413005	65561610	chr14:65413005-65561610	0	+	65561563	65561610	789624	4	209,98,146,274,	0,42615,103237,148331,
#Partially deleted in new
chr14	65413007	65743142	chr14:65413007-65743142	1	+	65617096	65742410	789624	11	207,98,116,163,102,115,238,247,177,151,1050,	0,42613,202970,203203,204082,216484,256235,308767,311139,320223,329085,
#Partially deleted in new
chr14	65413018	65561715	chr14:65413018-65561715	0	+	65561563	65561715	789624	4	196,98,78,379,	0,42602,66688,148318,
#Partially deleted in new
chr14	65413021	65561697	chr14:65413021-65561697	0	+	65561563	65561697	789624	2	193,361,	0,148315,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	65413068	65458188	chr14:65413068-65458188	0	+	65413068	65413068	8553170	3	146,98,295,	0,42552,44825,
#Partially deleted in new
chr14	65467806	65468341	chr14:65467806-65468341	7	-	65467806	65467806	16724991	1	535,	0,
#Partially deleted in new
chr14	65471101	65471186	chr14:65471101-65471186	3	+	65471101	65471101	5263520	1	85,	0,
#Partially deleted in new
chr14	65488317	65561702	chr14:65488317-65561702	0	+	65561563	65561702	789624	2	266,366,	0,73019,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	65528829	65529574	chr14:65528829-65529574	7	-	65528829	65528829	16724991	2	370,43,	0,702,
#Partially deleted in new
chr14	65879591	65881070	chr14:65879591-65881070	7	-	65879591	65879591	16724991	1	1479,	0,
#Deleted in new
chr14	65900931	65901451	chr14:65900931-65901451	7	-	65900931	65900931	16724991	1	520,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	65957296	66004523	chr14:65957296-66004523	3	-	65957296	65957296	8553170	4	559,81,64,69,	0,31273,32383,47158,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	65986966	65987447	chr14:65986966-65987447	3	-	65986966	65986966	8553170	1	481,	0,
#Deleted in new
chr14	66012829	66013789	chr14:66012829-66013789	7	-	66012829	66012829	16724991	1	960,	0,
#Partially deleted in new
chr14	66111580	66123706	chr14:66111580-66123706	3	+	66111580	66111580	8553170	3	415,147,46,	0,6327,12080,
#Partially deleted in new
chr14	66111630	66123759	chr14:66111630-66123759	0	+	66111630	66111630	8553170	4	141,147,170,99,	0,6277,11513,12030,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	66111630	66123193	chr14:66111630-66123193	1	+	66111630	66111630	8553170	4	141,147,239,50,	0,6277,11009,11513,
#Partially deleted in new
chr14	66111630	66125847	chr14:66111630-66125847	0	+	66111630	66111630	8553170	4	141,147,164,79,	0,6277,12030,14138,
#Partially deleted in new
chr14	66111634	66123199	chr14:66111634-66123199	0	+	66111634	66111634	8553170	3	361,147,56,	0,6273,11509,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	66177526	66177635	chr14:66177526-66177635	3	-	66177526	66177526	8553170	1	109,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	66411703	66498677	chr14:66411703-66498677	0	+	66411703	66411703	8553170	10	266,608,153,97,51,79,142,41,59,325,	0,955,74953,76456,77283,79903,80349,85123,86405,86649,
#Partially deleted in new
chr14	66486288	66498677	chr14:66486288-66498677	0	+	66486502	66491675	789624	12	264,153,97,51,78,84,79,142,110,41,59,325,	0,368,1871,2698,4453,4732,5318,5764,9373,10538,11820,12064,
#Partially deleted in new
chr14	66486288	66498677	chr14:66486288-66498677	0	+	66486502	66495669	789624	12	264,153,97,51,78,84,60,142,110,41,59,325,	0,368,1871,2698,4453,4732,5337,5764,9373,10538,11820,12064,
#Partially deleted in new
chr14	66486288	66498677	chr14:66486288-66498677	0	+	66486502	66493828	789624	13	264,153,97,51,78,84,60,142,171,110,41,59,325,	0,368,1871,2698,4453,4732,5337,5764,7484,9373,10538,11820,12064,
#Partially deleted in new
chr14	66486353	66498552	chr14:66486353-66498552	0	+	66486502	66491675	789624	10	199,153,97,51,78,84,79,142,59,200,	0,303,1806,2633,4388,4667,5253,5699,11755,11999,
#Partially deleted in new
chr14	66486370	66498553	chr14:66486370-66498553	0	+	66486502	66491675	789624	10	182,153,97,51,78,79,142,41,59,201,	0,286,1789,2616,4371,5236,5682,10456,11738,11982,
#Partially deleted in new
chr14	66486370	66498553	chr14:66486370-66498553	3	+	66486502	66498472	789624	10	182,153,97,51,78,84,60,142,59,201,	0,286,1789,2616,4371,4650,5255,5682,11738,11982,
#Partially deleted in new
chr14	66486390	66498552	chr14:66486390-66498552	0	+	66486502	66492828	789624	11	162,153,97,51,78,60,142,89,41,59,200,	0,266,1769,2596,4351,5235,5662,6421,10436,11718,11962,
#Partially deleted in new
chr14	66486406	66498400	chr14:66486406-66498400	0	+	66486502	66496837	789624	9	146,97,51,78,60,142,41,59,48,	0,1753,2580,4335,5219,5646,10420,11702,11946,
#Partially deleted in new
chr14	66486666	66498553	chr14:66486666-66498553	0	+	66486666	66496847	789624	5	143,97,41,59,201,	0,1493,10160,11442,11686,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	66494643	66496334	chr14:66494643-66496334	0	-	66494643	66494643	8553170	2	213,73,	0,1618,
#Partially deleted in new
chr14	66496682	66498553	chr14:66496682-66498553	0	+	66496682	66496682	8553170	3	185,59,201,	0,1426,1670,
#Partially deleted in new
chr14	66507406	67181798	chr14:66507406-67181798	1	+	66508527	67180937	0	22	1185,79,58,93,95,67,273,135,43,138,93,56,120,59,154,122,88,74,65,104,97,995,	0,173700,269057,317067,372532,408596,415259,457784,516226,551242,581576,593449,602733,604454,605611,614849,635955,652008,657755,661526,672171,673397,
#Partially deleted in new
chr14	66507406	67181803	chr14:66507406-67181803	3	+	66508527	67180937	0	23	1185,79,58,93,95,67,273,99,135,43,138,93,56,120,59,154,122,88,74,65,104,97,1000,	0,173700,269057,317067,372532,408596,415259,416787,457784,516226,551242,581576,593449,602733,604454,605611,614849,635955,652008,657755,661526,672171,673397,
#Partially deleted in new
chr14	66508137	67059029	chr14:66508137-67059029	1	+	66508527	67058839	789624	11	454,79,58,39,95,67,273,99,135,43,381,	0,172969,268326,334540,371801,407865,414528,416056,457053,515495,550511,
#Partially deleted in new
chr14	66508503	67181023	chr14:66508503-67181023	1	+	66508527	67180937	789624	25	88,79,58,93,39,95,67,273,135,57,42,43,138,93,56,120,59,154,122,88,74,65,104,97,220,	0,172603,267960,315970,334174,371435,407499,414162,456687,477178,487673,515129,550145,580479,592352,601636,603357,604514,613752,634858,650911,656658,660429,671074,672300,
#Partially deleted in new
chr14	66508506	66880032	chr14:66508506-66880032	0	+	66508527	66709363	789624	7	85,79,102,58,93,39,94,	0,172600,200850,267957,315967,334171,371432,
#Partially deleted in new
chr14	66508506	66922758	chr14:66508506-66922758	0	+	66508527	66824483	789624	6	85,79,93,95,67,93,	0,172600,315967,371432,407496,414159,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	66508515	66916034	chr14:66508515-66916034	0	+	66508527	66551096	789624	7	76,141,79,58,93,95,32,	0,42525,172591,267948,315958,371423,407487,
#Partially deleted in new
chr14	66508515	66880033	chr14:66508515-66880033	0	+	66508527	66709363	789624	6	76,79,102,58,93,95,	0,172591,200841,267948,315958,371423,
#Partially deleted in new
chr14	66509058	66824554	chr14:66509058-66824554	0	+	66509058	66509058	8553170	4	344,79,58,81,	0,172048,267405,315415,
#Deleted in new
chr14	66760531	66761018	chr14:66760531-66761018	7	+	66760531	66760531	16724991	1	487,	0,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr14	66823094	67181093	chr14:66823094-67181093	0	+	66823094	66823094	8553170	21	249,93,95,67,273,99,135,43,138,93,56,120,59,154,122,88,74,65,104,97,290,	0,1379,56844,92908,99571,101099,142096,200538,235554,265888,277761,287045,288766,289923,299161,320267,336320,342067,345838,356483,357709,
#Partially deleted in new
chr14	66824473	67058726	chr14:66824473-67058726	0	+	66824473	67058726	789624	8	93,95,67,273,135,57,43,78,	0,55465,91529,98192,140717,161208,199159,234175,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	66969037	66969816	chr14:66969037-66969816	3	-	66969037	66969037	8553170	2	373,141,	0,638,
#Partially deleted in new
chr14	67058648	67110287	chr14:67058648-67110287	0	+	67058648	67058648	8553170	4	138,93,56,148,	0,30334,42207,51491,
#Partially deleted in new
chr14	67111914	67168991	chr14:67111914-67168991	0	+	67111914	67111914	8553170	6	5,154,122,88,65,59,	0,1103,10341,31447,53247,57018,
#Partially deleted in new
chr14	67113069	67169136	chr14:67113069-67169136	0	+	67113069	67169087	789624	6	102,122,88,74,65,204,	0,9186,30292,46345,52092,55863,
#Partially deleted in new
chr14	67143000	67165230	chr14:67143000-67165230	0	+	67143000	67143000	8553170	3	449,74,69,	0,16414,22161,
#Deleted in new
chr14	67180848	67181792	chr14:67180848-67181792	0	+	67180848	67181570	789624	2	31,373,	0,571,
#Partially deleted in new
chr14	67189392	67203130	chr14:67189392-67203130	0	+	67198161	67203130	789624	5	177,57,87,185,37,	0,305,7878,8743,13701,
#Partially deleted in new
chr14	67189392	67228550	chr14:67189392-67228550	3	+	67198161	67225197	789624	9	177,87,185,200,553,248,29,148,163,	0,7878,8743,13701,15144,18809,32386,35725,38995,
#Partially deleted in new
chr14	67189428	67228550	chr14:67189428-67228550	0	+	67198161	67225197	789624	9	141,87,185,200,553,248,29,148,163,	0,7842,8707,13665,15108,18773,32350,35689,38959,
#Partially deleted in new
chr14	67189442	67200560	chr14:67189442-67200560	0	+	67198161	67198986	789624	5	127,87,185,156,1034,	0,7828,8693,9532,10084,
#Partially deleted in new
chr14	67189450	67224928	chr14:67189450-67224928	0	+	67198161	67198986	789624	9	119,87,185,159,200,70,133,29,288,	0,7820,8685,9521,13643,15086,18866,32328,35190,
#Partially deleted in new
chr14	67189460	67228545	chr14:67189460-67228545	0	+	67198161	67225197	789624	10	109,87,185,200,553,49,133,29,148,158,	0,7810,8675,13633,15076,18741,18856,32318,35657,38927,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	67196773	67223940	chr14:67196773-67223940	0	+	67198161	67201532	789624	9	111,87,185,317,200,553,248,247,188,	0,497,1362,4657,6320,7763,11428,25005,26979,
#Partially deleted in new
chr14	67197288	67203287	chr14:67197288-67203287	0	+	67197288	67197288	8553170	3	69,185,120,	0,847,5879,
#Deleted in new
chr14	67199061	67200327	chr14:67199061-67200327	7	+	67199061	67199061	16724991	1	1266,	0,
#Partially deleted in new
chr14	67204947	67223940	chr14:67204947-67223940	0	+	67204947	67221793	789624	3	142,29,188,	0,16831,18805,
#Partially deleted in new
chr14	67227470	67228544	chr14:67227470-67228544	0	+	67227470	67227470	8553170	2	264,157,	0,917,
#Partially deleted in new
chr14	67241108	67335819	chr14:67241108-67335819	3	+	67279170	67332956	0	15	425,83,520,209,78,147,162,78,184,72,72,168,203,111,3040,	0,28592,37909,51402,60280,60863,61301,62413,71418,75723,76299,79121,79948,82593,91671,
#Partially deleted in new
chr14	67241341	67269764	chr14:67241341-67269764	0	+	67241341	67241341	8553170	3	192,107,64,	0,12862,28359,
#Partially deleted in new
chr14	67241422	67335819	chr14:67241422-67335819	1	+	67279272	67332956	0	15	111,83,288,209,78,147,162,78,184,72,72,168,203,111,3040,	0,28278,37827,51088,59966,60549,60987,62099,71104,75409,75985,78807,79634,82279,91357,
#Partially deleted in new
chr14	67241422	67279986	chr14:67241422-67279986	1	+	67279170	67279545	789624	3	111,83,969,	0,28278,37595,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	67241434	67272059	chr14:67241434-67272059	0	+	67241434	67241434	8553170	2	99,2359,	0,28266,
#Partially deleted in new
chr14	67241437	67292693	chr14:67241437-67292693	0	+	67279272	67292693	789624	3	96,288,183,	0,37812,51073,
#Partially deleted in new
chr14	67241626	67279286	chr14:67241626-67279286	0	+	67279272	67279286	8553170	3	359,83,37,	0,28074,37623,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr14	67294370	67359791	chr14:67294370-67359791	0	-	67338620	67359698	789624	13	617,18,126,92,202,79,67,104,45,68,80,118,134,	0,9689,17687,42276,44190,46069,49001,51397,53038,54666,56240,58552,65287,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	67312004	67337776	chr14:67312004-67337776	0	-	67312004	67312004	8553170	3	179,92,390,	0,24642,25382,
#Partially deleted in new
chr14	67336187	67350669	chr14:67336187-67350669	0	-	67336730	67350669	789624	3	551,68,59,	0,12849,14423,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	67336677	67349061	chr14:67336677-67349061	0	-	67338620	67349061	789624	9	61,123,78,202,79,67,104,45,25,	0,709,1397,1883,3762,6694,9090,10731,12359,
#Partially deleted in new
chr14	67338070	67360249	chr14:67338070-67360249	3	-	67338620	67359698	789624	9	692,79,67,104,45,68,80,118,592,	0,2369,5301,7697,9338,10966,12540,14852,21587,
#Partially deleted in new
chr14	67338070	67359803	chr14:67338070-67359803	1	-	67338620	67359698	789624	5	692,79,67,118,146,	0,2369,5301,14852,21587,
#Partially deleted in new
chr14	67338250	67359787	chr14:67338250-67359787	1	-	67338620	67350684	789624	8	512,79,67,104,45,68,80,130,	0,2189,5121,7517,9158,10786,12360,21407,
#Partially deleted in new
chr14	67338498	67359787	chr14:67338498-67359787	1	-	67338757	67359698	789624	8	264,79,104,45,68,80,118,130,	0,1941,7269,8910,10538,12112,14424,21159,
#Partially deleted in new
chr14	67338554	67352937	chr14:67338554-67352937	0	-	67338714	67352937	789624	6	208,104,45,68,80,15,	0,7213,8854,10482,12056,14368,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	67340067	67340176	chr14:67340067-67340176	3	+	67340067	67340067	8553170	1	109,	0,
#Partially deleted in new
chr14	67343371	67359794	chr14:67343371-67359794	0	-	67347431	67359698	789624	6	67,104,45,80,118,137,	0,2396,4037,7239,9551,16286,
#Partially deleted in new
chr14	67348854	67359794	chr14:67348854-67359794	0	-	67348854	67348854	8553170	4	250,80,118,137,	0,1756,4068,10803,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	67350617	67359832	chr14:67350617-67359832	0	-	67350617	67353027	789624	4	73,118,261,175,	0,2305,3081,9040,
#Partially deleted in new
chr14	67350631	67360265	chr14:67350631-67360265	0	-	67350631	67359698	789624	4	59,118,203,202,	0,2291,9026,9432,
#Partially deleted in new
chr14	67352730	67359742	chr14:67352730-67359742	0	-	67352730	67352730	8553170	2	310,85,	0,6927,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	67359996	67386516	chr14:67359996-67386516	3	+	67364767	67383440	0	8	460,242,80,152,107,98,144,3202,	0,4770,14471,16442,20662,21596,22450,23318,
#Partially deleted in new
chr14	67360352	67374648	chr14:67360352-67374648	0	+	67360352	67360352	8553170	3	104,242,181,	0,4414,14115,
#Partially deleted in new
chr14	67360555	67382587	chr14:67360555-67382587	0	+	67364767	67382587	789624	7	179,242,80,152,107,98,141,	0,4211,13912,15883,20103,21037,21891,
#Partially deleted in new
chr14	67364007	67384122	chr14:67364007-67384122	1	+	67364767	67383440	0	7	1001,80,152,107,98,144,808,	0,10460,12431,16651,17585,18439,19307,
#Partially deleted in new
chr14	67364897	67382681	chr14:67364897-67382681	0	+	67364897	67382656	789624	6	111,80,152,107,98,235,	0,9570,11541,15761,16695,17549,
#Deleted in new
chr14	67382410	67383668	chr14:67382410-67383668	0	+	67382410	67382410	8553170	2	180,354,	0,904,
#Partially deleted in new
chr14	67386982	67412200	chr14:67386982-67412200	3	-	67387328	67412059	0	9	474,79,84,102,188,92,182,165,183,	0,1241,3680,5343,5679,6167,8419,10679,25035,
#Partially deleted in new
chr14	67386986	67392705	chr14:67386986-67392705	0	-	67387328	67392705	789624	4	470,79,102,44,	0,1237,5339,5675,
#Partially deleted in new
chr14	67387387	67397820	chr14:67387387-67397820	0	-	67390703	67397820	789624	5	69,84,84,182,159,	0,831,3275,8014,10274,
#Partially deleted in new
chr14	67388245	67397670	chr14:67388245-67397670	0	-	67388245	67397670	789624	6	57,84,188,92,182,9,	0,2417,4416,4904,7156,9416,
#Partially deleted in new
chr14	67388251	67412071	chr14:67388251-67412071	0	-	67393214	67412059	789624	7	51,84,102,188,92,165,54,	0,2411,4074,4410,4898,9410,23766,
#Partially deleted in new
chr14	67397745	67412167	chr14:67397745-67412167	0	-	67397745	67397745	8553170	3	81,49,150,	0,261,14272,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	67441854	67441930	chr14:67441854-67441930	3	-	67441854	67441854	5263520	1	76,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	67447083	67515485	chr14:67447083-67515485	0	-	67473419	67473923	789624	9	846,98,65,362,137,135,955,173,41,	0,2853,6996,7236,20020,20647,25903,39916,68361,
#Partially deleted in new
chr14	67454465	67467346	chr14:67454465-67467346	0	-	67454465	67454465	8553170	2	216,243,	0,12638,
#Partially deleted in new
chr14	67470265	67515304	chr14:67470265-67515304	1	-	67473419	67473923	789624	3	3676,173,219,	0,16734,44820,
#Partially deleted in new
chr14	67470265	67515471	chr14:67470265-67515471	3	-	67473419	67473923	789624	4	3676,173,65,27,	0,16734,33221,45179,
#Partially deleted in new
chr14	67473519	67533739	chr14:67473519-67533739	0	-	67473519	67473923	789624	3	422,173,104,	0,13480,60116,
#Partially deleted in new
chr14	67473684	67488732	chr14:67473684-67488732	0	-	67473684	67473923	789624	3	257,173,225,	0,13315,14823,
#Partially deleted in new
chr14	67473753	67515182	chr14:67473753-67515182	0	-	67473753	67473923	789624	4	188,173,65,97,	0,13246,29733,41332,
#Partially deleted in new
chr14	67473757	67515429	chr14:67473757-67515429	0	-	67473757	67473923	789624	3	184,173,344,	0,13242,41328,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr14	67533300	67589612	chr14:67533300-67589612	3	+	67541867	67587235	789624	29	98,160,63,150,84,82,758,79,92,151,143,111,87,162,81,183,109,113,177,98,178,156,101,142,143,130,87,147,2539,	0,8533,22524,23968,26307,28653,28836,35837,36620,38451,38834,39975,40500,40941,42091,42522,43094,44001,44722,45233,45833,46420,47637,48768,50440,50694,52267,52650,53773,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr14	67569032	67587681	chr14:67569032-67587681	0	+	67569032	67569032	8553170	22	184,92,151,143,111,87,162,81,183,109,113,177,98,178,156,101,142,143,130,87,147,608,	0,888,2719,3102,4243,4768,5209,6359,6790,7362,8269,8990,9501,10101,10688,11905,13036,14708,14962,16535,16918,18041,
#Partially deleted in new
chr14	67569738	67573302	chr14:67569738-67573302	0	+	67569738	67569738	8553170	4	274,151,143,27,	0,2013,2396,3537,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	67570467	67575599	chr14:67570467-67575599	0	+	67570467	67570467	8553170	6	1435,143,111,87,162,208,	0,1667,2808,3333,3774,4924,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr14	67571062	67589440	chr14:67571062-67589440	0	+	67571062	67571062	8553170	20	840,143,111,87,162,81,183,109,113,177,98,178,156,101,142,143,130,87,147,2367,	0,1072,2213,2738,3179,4329,4760,5332,6239,6960,7471,8071,8658,9875,11006,12678,12932,14505,14888,16011,
#Partially deleted in new
chr14	67571787	67573376	chr14:67571787-67573376	0	+	67571787	67571787	8553170	2	490,101,	0,1488,
#Partially deleted in new
chr14	67578562	67587548	chr14:67578562-67587548	0	+	67578562	67582148	789624	12	69,178,156,64,142,143,130,87,147,89,140,475,	0,571,1158,2375,3506,5178,5432,7005,7388,7805,8247,8511,
#Deleted in new
chr14	67579293	67580307	chr14:67579293-67580307	0	+	67579293	67579293	8553170	2	18,587,	0,427,
#Partially deleted in new
chr14	67579428	67582157	chr14:67579428-67582157	0	+	67579428	67579428	8553170	3	448,101,89,	0,1509,2640,
#Partially deleted in new
chr14	67580894	67585602	chr14:67580894-67585602	0	+	67580894	67580894	8553170	5	144,142,143,130,35,	0,1174,2846,3100,4673,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	67581585	67589611	chr14:67581585-67589611	0	+	67581585	67581585	8553170	6	625,143,130,87,147,2538,	0,2155,2409,3982,4365,5488,
#Partially deleted in new
chr14	67581954	67600169	chr14:67581954-67600169	0	-	67582166	67600169	789624	4	320,84,210,146,	0,10680,11788,18069,
#Deleted in new
chr14	67584110	67587366	chr14:67584110-67587366	0	+	67584110	67585984	789624	4	14,87,116,293,	0,1457,1871,2963,
#Deleted in new
chr14	67585115	67585984	chr14:67585115-67585984	0	+	67585115	67585115	8553170	2	539,34,	0,835,
#Deleted in new
chr14	67585990	67586911	chr14:67585990-67586911	0	+	67585990	67585990	8553170	2	107,64,	0,857,
#Partially deleted in new
chr14	67586015	67589231	chr14:67586015-67589231	0	+	67586015	67587235	789624	3	82,227,438,	0,1058,2778,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	67586410	67589533	chr14:67586410-67589533	0	+	67586410	67586410	8553170	2	539,2460,	0,663,
#Partially deleted in new
chr14	67589310	67600287	chr14:67589310-67600287	3	-	67590079	67600203	789624	4	862,84,210,264,	0,3324,4432,10713,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	67589713	67593918	chr14:67589713-67593918	0	-	67590144	67593918	789624	4	459,122,84,176,	0,2601,2921,4029,
#Partially deleted in new
chr14	67589754	67592776	chr14:67589754-67592776	0	-	67589754	67589754	8553170	2	418,142,	0,2880,
#Partially deleted in new
chr14	67589805	67600268	chr14:67589805-67600268	1	-	67590079	67600203	789624	4	367,81,210,245,	0,2829,3937,10218,
#Partially deleted in new
chr14	67589992	67600132	chr14:67589992-67600132	0	-	67590079	67600132	789624	3	180,210,109,	0,3750,10031,
#Partially deleted in new
chr14	67590036	67600265	chr14:67590036-67600265	0	-	67593875	67600203	789624	3	136,205,242,	0,3706,9987,
#Partially deleted in new
chr14	67590111	67600246	chr14:67590111-67600246	0	-	67593730	67600203	789624	4	61,84,225,223,	0,2523,3616,9912,
#Partially deleted in new
chr14	67590126	67600282	chr14:67590126-67600282	0	-	67593875	67600203	789624	4	46,84,205,259,	0,2508,3616,9897,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	67591808	67600267	chr14:67591808-67600267	1	-	67592241	67600203	789624	4	628,84,93,244,	0,826,1934,8215,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	67593253	67600286	chr14:67593253-67600286	0	-	67593253	67593253	8553170	2	699,263,	0,6770,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	67610985	67613864	chr14:67610985-67613864	7	+	67610985	67610985	16724991	3	201,103,315,	0,2164,2564,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	67614928	67616626	chr14:67614928-67616626	7	+	67614928	67614928	16724991	1	1698,	0,
#Partially deleted in new
chr14	67615483	67616097	chr14:67615483-67616097	5	+	67615483	67615483	16724991	1	614,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	67616902	67617084	chr14:67616902-67617084	7	+	67616902	67616902	16724991	2	30,147,	0,35,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	67617301	67617415	chr14:67617301-67617415	3	-	67617301	67617301	8553170	1	114,	0,
#Partially deleted in new
chr14	67619797	67651720	chr14:67619797-67651720	3	+	67619977	67650920	0	8	291,73,178,160,95,105,137,1006,	0,1096,22388,25845,26846,27123,28249,30917,
#Partially deleted in new
chr14	67619935	67646915	chr14:67619935-67646915	0	+	67619935	67619935	8553170	5	153,73,178,160,272,	0,958,22250,25707,26708,
#Partially deleted in new
chr14	67619979	67646740	chr14:67619979-67646740	0	+	67619979	67619979	8553170	4	109,73,178,97,	0,914,22206,26664,
#Partially deleted in new
chr14	67646447	67650808	chr14:67646447-67650808	0	+	67646447	67646447	8553170	4	291,105,137,94,	0,473,1599,4267,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	67647074	67674831	chr14:67647074-67674831	3	-	67651384	67674489	0	6	4407,62,174,192,59,457,	0,6362,9341,12656,15402,27300,
#Partially deleted in new
chr14	67651151	67659791	chr14:67651151-67659791	0	-	67651331	67659791	789624	3	330,174,61,	0,5264,8579,
#Partially deleted in new
chr14	67651260	67659845	chr14:67651260-67659845	0	-	67653481	67659845	789624	4	221,62,178,115,	0,2176,5151,8470,
#Partially deleted in new
chr14	67651263	67674610	chr14:67651263-67674610	0	-	67663170	67674489	789624	7	218,62,174,192,59,162,236,	0,2173,5152,8467,11213,11765,23111,
#Deleted in new
chr14	67652299	67652614	chr14:67652299-67652614	7	-	67652299	67652299	16724991	1	315,	0,
#Partially deleted in new
chr14	67656479	67660194	chr14:67656479-67660194	0	-	67656479	67656479	8553170	2	110,464,	0,3251,
#Partially deleted in new
chr14	67656509	67674820	chr14:67656509-67674820	0	-	67659857	67674489	789624	3	80,192,446,	0,3221,17865,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	67657104	67657211	chr14:67657104-67657211	7	-	67657104	67657104	16724991	1	107,	0,
#Partially deleted in new
chr14	67659819	67690367	chr14:67659819-67690367	1	-	67663180	67690367	789624	5	103,59,162,190,156,	0,2657,3209,25195,30392,
#Partially deleted in new
chr14	67659863	67690267	chr14:67659863-67690267	0	-	67659863	67659863	8553170	4	59,59,190,190,	0,2613,25151,30214,
#Partially deleted in new
chr14	67659863	67690267	chr14:67659863-67690267	0	-	67659863	67659863	8553170	4	59,59,190,56,	0,2613,25151,30348,
#Partially deleted in new
chr14	67659863	67690367	chr14:67659863-67690367	2	-	67659863	67690367	789624	3	59,59,156,	0,2613,30348,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	67676800	67695814	chr14:67676800-67695814	3	-	67678320	67695703	789624	7	1623,190,210,105,156,119,185,	0,8214,13411,14339,15637,16133,18829,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	67677363	67695754	chr14:67677363-67695754	1	-	67678320	67695703	789624	7	1060,190,210,105,156,80,125,	0,7651,12848,13776,15074,15609,18266,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	67677392	67692851	chr14:67677392-67692851	0	-	67677392	67677392	8553170	4	1031,190,174,2640,	0,7622,8691,12819,
#Partially deleted in new
chr14	67678033	67695733	chr14:67678033-67695733	1	-	67678320	67695703	789624	6	390,190,105,156,119,104,	0,6981,13106,14404,14900,17596,
#Partially deleted in new
chr14	67678072	67695766	chr14:67678072-67695766	0	-	67690309	67695703	789624	4	351,190,210,137,	0,6942,12139,17557,
#Partially deleted in new
chr14	67678086	67692483	chr14:67678086-67692483	0	-	67678320	67692483	789624	5	337,151,210,105,46,	0,6928,12125,13053,14351,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	67684509	67695717	chr14:67684509-67695717	0	-	67684509	67684509	8553170	5	695,105,156,119,88,	0,6630,7928,8424,11120,
#Partially deleted in new
chr14	67685072	67695730	chr14:67685072-67695730	0	-	67685072	67695703	789624	4	132,210,119,101,	0,5139,7861,10557,
#Partially deleted in new
chr14	67685152	67695764	chr14:67685152-67695764	0	-	67685152	67695703	789624	5	52,210,105,119,135,	0,5059,5987,7781,10477,
#Partially deleted in new
chr14	67690274	67695774	chr14:67690274-67695774	0	-	67692478	67695703	789624	4	147,105,156,145,	0,865,2163,5355,
#Partially deleted in new
chr14	67692415	67695793	chr14:67692415-67695793	0	-	67692415	67692415	8553170	2	637,164,	0,3214,
#Partially deleted in new
chr14	67701885	67734452	chr14:67701885-67734452	3	+	67722642	67733848	789624	9	50,55,287,119,156,105,210,190,707,	0,18962,20538,22587,23213,24165,25095,27305,31860,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	67705953	67706252	chr14:67705953-67706252	3	+	67705953	67705953	8553170	1	299,	0,
#Deleted in new
chr14	67714544	67715204	chr14:67714544-67715204	7	+	67714544	67714544	16724991	2	161,313,	0,347,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	67717805	67720899	chr14:67717805-67720899	0	+	67717805	67717805	8553170	2	77,86,	0,3008,
#Partially deleted in new
chr14	67720841	67734450	chr14:67720841-67734450	1	+	67722642	67733848	789624	8	61,287,119,156,105,210,190,705,	0,1582,3631,4257,5209,6139,8349,12904,
#Partially deleted in new
chr14	67727163	67729746	chr14:67727163-67729746	0	+	67727163	67727163	8553170	2	27,556,	0,2027,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr14	67727373	67770477	chr14:67727373-67770477	0	-	67727373	67727373	8553170	15	846,609,45,183,60,142,200,198,219,210,148,221,137,32,884,	0,1837,23678,24970,26333,26697,27677,28574,33992,34829,35298,38853,40330,41143,42220,
#Deleted in new
chr14	67735194	67735350	chr14:67735194-67735350	7	+	67735194	67735194	16724991	1	156,	0,
#Partially deleted in new
chr14	67746519	67816589	chr14:67746519-67816589	3	-	67748435	67815963	789624	42	2120,45,183,60,142,200,198,219,210,148,221,137,32,137,164,99,247,177,123,105,197,746,103,219,165,120,264,202,152,69,84,609,204,164,89,165,131,523,90,79,277,56,	0,4532,5824,7187,7551,8531,9428,14846,15683,16152,19707,21184,21997,23074,25527,28496,29340,31039,31606,33721,34813,36260,37814,38539,39338,39594,42815,44052,47088,47651,51152,51494,55559,57581,58697,58934,60025,60878,62680,67466,69250,70014,
#Partially deleted in new
chr14	67748032	67816580	chr14:67748032-67816580	0	-	67798558	67815963	789624	40	607,45,183,60,142,200,198,219,210,148,221,137,32,137,164,99,247,177,123,105,197,427,103,219,165,120,264,202,152,69,84,609,89,165,131,523,90,79,277,47,	0,3019,4311,5674,6038,7018,7915,13333,14170,14639,18194,19671,20484,21561,24014,26983,27827,29526,30093,32208,33300,35066,36301,37026,37825,38081,41302,42539,45575,46138,49639,49981,57184,57421,58512,59365,61167,65953,67737,68501,
#Boundary problem: need 41, got 0, diff 41, mapped 0.0
chr14	67748228	67816587	chr14:67748228-67816587	0	-	67748228	67748228	8553170	41	411,45,183,60,142,200,198,1047,148,221,137,32,137,164,99,247,177,123,105,197,746,103,219,165,120,264,202,152,69,84,609,204,164,89,165,131,523,90,79,277,54,	0,2823,4115,5478,5842,6822,7719,13137,14443,17998,19475,20288,21365,23818,26787,27631,29330,29897,32012,33104,34551,36105,36830,37629,37885,41106,42343,45379,45942,49443,49785,53850,55872,56988,57225,58316,59169,60971,65757,67541,68305,
#Partially deleted in new
chr14	67750472	67761491	chr14:67750472-67761491	1	-	67751021	67761491	789624	7	624,183,60,142,200,198,126,	0,1871,3234,3598,4578,5475,10893,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	67751227	67751544	chr14:67751227-67751544	3	-	67751227	67751227	8553170	1	317,	0,
#Deleted in new
chr14	67753710	67756421	chr14:67753710-67756421	0	-	67753710	67753710	8553170	4	56,142,200,474,	0,360,1340,2237,
#Boundary problem: need 35, got 0, diff 35, mapped 0.0
chr14	67760781	67816587	chr14:67760781-67816587	1	-	67761275	67815963	789624	35	803,210,148,221,137,32,137,164,99,247,177,123,105,197,746,103,219,165,120,264,202,152,69,84,609,204,164,89,165,131,523,90,79,277,54,	0,1421,1890,5445,6922,7735,8812,11265,14234,15078,16777,17344,19459,20551,21998,23552,24277,25076,25332,28553,29790,32826,33389,36890,37232,41297,43319,44435,44672,45763,46616,48418,53204,54988,55752,
#Deleted in new
chr14	67777583	67778327	chr14:67777583-67778327	0	-	67777583	67777583	8553170	2	152,202,	0,542,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	67796220	67816585	chr14:67796220-67816585	0	-	67796220	67796220	8553170	11	1535,609,204,164,165,131,523,90,79,277,52,	0,1793,5858,7880,9233,10324,11177,12979,17765,19549,20313,
#Partially deleted in new
chr14	67797319	67816585	chr14:67797319-67816585	0	-	67797319	67797319	8553170	12	436,609,204,164,89,165,131,523,90,79,277,52,	0,694,4759,6781,7897,8134,9225,10078,11880,16666,18450,19214,
#Deleted in new
chr14	67799003	67799609	chr14:67799003-67799609	7	+	67799003	67799003	16724991	1	606,	0,
#Deleted in new
chr14	67815528	67816590	chr14:67815528-67816590	0	-	67815528	67815528	8553170	2	518,57,	0,1005,
#Partially deleted in new
chr14	67819778	68611565	chr14:67819778-68611565	1	+	67823543	68611247	789624	11	75,86,114,117,137,120,184,97,104,79,560,	0,3763,5685,15301,45224,66090,67242,472105,591645,648393,791227,
#Partially deleted in new
chr14	67819807	68478099	chr14:67819807-68478099	1	+	67823543	68477664	789624	11	46,86,114,117,137,120,184,97,104,79,452,	0,3734,5656,15272,45195,66061,67213,472076,591616,648364,657840,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	67819807	68595996	chr14:67819807-68595996	3	+	67823543	68594603	789624	11	46,86,114,117,137,120,184,97,104,79,1512,	0,3734,5656,15272,45195,66061,67213,472076,591616,648364,774677,
#Partially deleted in new
chr14	67819811	67887326	chr14:67819811-67887326	1	+	67823543	67887288	789624	7	42,86,114,117,137,120,306,	0,3730,5652,15268,45191,66057,67209,
#Partially deleted in new
chr14	67819828	68730218	chr14:67819828-68730218	1	+	67823543	68650845	789624	12	25,86,114,117,137,120,184,97,104,79,76,411,	0,3713,5635,15251,45174,66040,67192,472055,591595,648343,830952,909979,
#Partially deleted in new
chr14	67822164	67865087	chr14:67822164-67865087	0	+	67823543	67865087	789624	5	166,86,114,117,85,	0,1377,3299,12915,42838,
#Partially deleted in new
chr14	67823519	67835106	chr14:67823519-67835106	0	+	67823543	67835106	789624	3	108,114,27,	0,1944,11560,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	67843432	67887150	chr14:67843432-67887150	0	+	67843432	67843432	8553170	4	68,137,120,130,	0,21570,42436,43588,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	67857891	67887212	chr14:67857891-67887212	0	+	67857891	67857891	8553170	4	166,137,120,192,	0,7111,27977,29129,
#Partially deleted in new
chr14	67865031	68683118	chr14:67865031-68683118	0	+	67865031	67865031	8553170	6	108,120,184,97,104,182,	0,20837,21989,426852,546392,817905,
#Partially deleted in new
chr14	67885732	67887550	chr14:67885732-67887550	0	+	67885732	67885732	8553170	2	256,530,	0,1288,
#Partially deleted in new
chr14	67886597	68540249	chr14:67886597-68540249	0	+	67886597	67886597	8553170	6	32,184,97,104,79,50,	0,423,405286,524826,581574,653602,
#Partially deleted in new
chr14	67886755	68411457	chr14:67886755-68411457	0	+	67886755	67886755	8553170	4	102,184,97,34,	0,265,405128,524668,
#Partially deleted in new
chr14	67887066	68683118	chr14:67887066-68683118	0	+	67887066	67887066	8553170	6	138,97,104,79,69,182,	0,404817,524357,581105,676483,795870,
#Partially deleted in new
chr14	67887101	68683171	chr14:67887101-68683171	0	+	67887101	67887101	8553170	5	103,97,104,79,235,	0,404782,524322,581070,795835,
#Partially deleted in new
chr14	67887129	68497562	chr14:67887129-68497562	0	+	67887129	67887129	8553170	5	75,97,104,79,439,	0,404754,524294,581042,609994,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	67887129	68497881	chr14:67887129-68497881	0	+	67887129	67887129	8553170	6	75,97,104,79,45,758,	0,404754,524294,581042,581425,609994,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	67908304	68468250	chr14:67908304-68468250	0	+	67908304	67908304	8553170	4	549,97,104,79,	0,383579,503119,559867,
#Partially deleted in new
chr14	68000278	68497257	chr14:68000278-68497257	0	+	68000278	68000278	8553170	6	35,79,97,104,79,134,	0,69290,291605,411145,467893,496845,
#Deleted in new
chr14	68113705	68114144	chr14:68113705-68114144	7	-	68113705	68113705	16724991	1	439,	0,
#Partially deleted in new
chr14	68125003	68130196	chr14:68125003-68130196	3	-	68125003	68125003	8553170	2	406,131,	0,5062,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	68149616	68149908	chr14:68149616-68149908	3	-	68149616	68149616	8553170	1	292,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	68236242	68236539	chr14:68236242-68236539	3	-	68236242	68236242	8553170	1	297,	0,
#Deleted in new
chr14	68338727	68339528	chr14:68338727-68339528	7	-	68338727	68338727	16724991	1	801,	0,
#Partially deleted in new
chr14	68387136	68497451	chr14:68387136-68497451	0	+	68387136	68387136	8553170	4	50,104,79,328,	0,24287,81035,109987,
#Partially deleted in new
chr14	68411509	68470717	chr14:68411509-68470717	0	+	68411509	68470533	789624	3	18,79,195,	0,56662,59013,
#Deleted in new
chr14	68421697	68422196	chr14:68421697-68422196	7	-	68421697	68421697	16724991	1	499,	0,
#Deleted in new
chr14	68472032	68478101	chr14:68472032-68478101	0	+	68472032	68472032	8553170	2	87,454,	0,5615,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	68545561	68594988	chr14:68545561-68594988	0	+	68545561	68545561	8553170	2	63,504,	0,48923,
#Deleted in new
chr14	68627165	68628445	chr14:68627165-68628445	3	-	68627165	68627165	8553170	2	185,94,	0,1186,
#Partially deleted in new
chr14	68683410	68685565	chr14:68683410-68685565	3	-	68683410	68683410	8553170	2	266,195,	0,1960,
#Deleted in new
chr14	68693089	68693583	chr14:68693089-68693583	7	+	68693089	68693089	16724991	1	494,	0,
#Deleted in new
chr14	68787659	68791243	chr14:68787659-68791243	1	-	68790487	68791187	789624	2	2833,261,	0,3323,
#Deleted in new
chr14	68787661	68793240	chr14:68787661-68793240	1	-	68789532	68792938	0	2	2831,359,	0,5220,
#Deleted in new
chr14	68788604	68794736	chr14:68788604-68794736	3	-	68789532	68792938	0	3	205,966,1855,	0,922,4277,
#Deleted in new
chr14	68789944	68796253	chr14:68789944-68796253	0	-	68789944	68796149	789624	2	548,179,	0,6130,
#Deleted in new
chr14	68789954	68796081	chr14:68789954-68796081	0	-	68789954	68790483	789624	2	538,39,	0,6088,
#Deleted in new
chr14	68790188	68796214	chr14:68790188-68796214	0	-	68790188	68796149	789624	3	304,189,140,	0,2693,5886,
#Partially deleted in new
chr14	68861761	68862525	chr14:68861761-68862525	7	+	68861761	68861761	16724991	2	294,153,	0,611,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	68867856	68869951	chr14:68867856-68869951	7	-	68867856	68867856	16724991	4	491,297,120,222,	0,798,1387,1873,
#Partially deleted in new
chr14	68874142	68979440	chr14:68874142-68979440	3	-	68874858	68979056	0	21	875,159,81,147,180,135,183,141,109,151,148,231,93,86,82,79,88,87,120,115,489,	0,2939,4846,5819,6667,8315,8730,10025,10632,11282,15996,17910,19512,28334,30512,35175,35812,38013,46863,51415,104809,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	68874317	68888263	chr14:68874317-68888263	0	-	68874317	68874317	8553170	10	700,159,81,147,180,135,183,141,109,2839,	0,2764,4671,5644,6492,8140,8555,9850,10457,11107,
#Partially deleted in new
chr14	68874322	68979239	chr14:68874322-68979239	1	-	68874858	68979056	0	22	695,159,66,81,147,180,135,183,141,109,151,148,231,93,86,82,79,88,87,120,115,288,	0,2759,4135,4666,5639,6487,8135,8550,9845,10452,11102,15816,17730,19332,28154,30332,34995,35632,37833,46683,51235,104629,
#Partially deleted in new
chr14	68874322	68879022	chr14:68874322-68879022	0	-	68874322	68874322	8553170	2	695,1941,	0,2759,
#Partially deleted in new
chr14	68874685	68979262	chr14:68874685-68979262	1	-	68874858	68979056	0	21	332,159,66,147,180,135,183,141,109,151,148,231,93,86,82,79,88,87,120,115,311,	0,2396,3772,5276,6124,7772,8187,9482,10089,10739,15453,17367,18969,27791,29969,34632,35269,37470,46320,50872,104266,
#Partially deleted in new
chr14	68874782	68977566	chr14:68874782-68977566	1	-	68874858	68925582	789624	21	235,159,66,147,180,135,183,141,109,151,148,231,93,86,82,79,88,87,120,115,189,	0,2299,3675,5179,6027,7675,8090,9385,9992,10642,15356,17270,18872,27694,29872,34535,35172,37373,46223,50775,102595,
#Partially deleted in new
chr14	68874785	68882567	chr14:68874785-68882567	0	-	68874858	68882567	789624	5	232,159,147,180,110,	0,2296,5176,6024,7672,
#Partially deleted in new
chr14	68874858	68979076	chr14:68874858-68979076	1	-	68874858	68979056	0	21	288,159,66,147,180,135,183,141,109,151,148,231,93,86,82,79,88,87,120,115,125,	0,2223,3599,5103,5951,7599,8014,9309,9916,10566,15280,17194,18796,27618,29796,34459,35096,37297,46147,50699,104093,
#Partially deleted in new
chr14	68879045	68890142	chr14:68879045-68890142	0	-	68879045	68890142	789624	8	24,147,132,183,141,109,151,4,	0,916,1764,3827,5122,5729,6379,11093,
#Partially deleted in new
chr14	68879048	68884303	chr14:68879048-68884303	0	-	68879048	68884303	789624	5	21,147,180,135,136,	0,913,1761,3409,5119,
#Deleted in new
chr14	68879863	68881122	chr14:68879863-68881122	0	-	68879863	68879863	8553170	2	245,313,	0,946,
#Partially deleted in new
chr14	68883264	68884295	chr14:68883264-68884295	0	-	68883264	68883264	8553170	2	146,128,	0,903,
#Deleted in new
chr14	68887784	68888084	chr14:68887784-68888084	7	-	68887784	68887784	16724991	1	300,	0,
#Partially deleted in new
chr14	68892227	68978289	chr14:68892227-68978289	0	-	68892227	68925582	789624	10	56,93,86,82,79,88,87,120,115,113,	0,1427,10249,12427,17090,17727,19928,28778,33330,85949,
#Partially deleted in new
chr14	68893664	68978735	chr14:68893664-68978735	0	-	68893664	68978258	789624	9	83,86,82,79,88,87,120,115,519,	0,8812,10990,15653,16290,18491,27341,31893,84552,
#Partially deleted in new
chr14	68893702	68921038	chr14:68893702-68921038	0	-	68893702	68893702	8553170	8	45,85,86,82,79,88,87,33,	0,7159,8774,10952,15615,16252,18453,27303,
#Partially deleted in new
chr14	68902542	68921359	chr14:68902542-68921359	0	-	68902542	68902542	8553170	7	20,82,79,88,87,120,95,	0,2112,6775,7412,9613,18463,18722,
#Partially deleted in new
chr14	68904701	68977654	chr14:68904701-68977654	0	-	68904701	68925582	789624	7	35,79,88,87,120,115,81,	0,4616,5253,7454,16304,20856,72872,
#Partially deleted in new
chr14	68910019	68947548	chr14:68910019-68947548	0	-	68910019	68925582	789624	5	23,87,120,115,185,	0,2136,10986,15538,37344,
#Partially deleted in new
chr14	68910021	68978240	chr14:68910021-68978240	0	-	68910021	68978051	789624	5	21,87,120,115,225,	0,2134,10984,15536,67994,
#Partially deleted in new
chr14	68925558	68978269	chr14:68925558-68978269	0	-	68925558	68978051	789624	2	114,320,	0,52391,
#Deleted in new
chr14	68936601	68936864	chr14:68936601-68936864	7	+	68936601	68936601	16724991	1	263,	0,
#Partially deleted in new
chr14	68973780	68979031	chr14:68973780-68979031	0	-	68973780	68973780	8553170	2	484,80,	0,5171,
#Partially deleted in new
chr14	68979681	68987463	chr14:68979681-68987463	3	+	68979681	68979681	789624	4	103,260,117,119,	0,246,6003,7663,
#Partially deleted in new
chr14	68980040	68981562	chr14:68980040-68981562	1	+	68980040	68980040	8553170	2	147,337,	0,1185,
#Deleted in new
chr14	69023149	69023308	chr14:69023149-69023308	7	-	69023149	69023149	16724991	1	159,	0,
#Partially deleted in new
chr14	69050880	69153126	chr14:69050880-69153126	3	-	69053856	69152978	0	9	4731,128,67,214,130,140,37,144,362,	0,11503,24464,40793,65485,67258,68313,71336,101884,
#Partially deleted in new
chr14	69051854	69152599	chr14:69051854-69152599	1	-	69053856	69122328	0	9	3757,128,67,214,130,140,37,144,186,	0,10529,23490,39819,64511,66284,67339,70362,100559,
#Partially deleted in new
chr14	69053801	69152609	chr14:69053801-69152609	1	-	69053856	69122328	0	9	1810,128,67,214,130,140,37,144,121,	0,8582,21543,37872,62564,64337,65392,68415,98687,
#Partially deleted in new
chr14	69053824	69153003	chr14:69053824-69153003	1	-	69053856	69152978	0	9	1787,128,67,214,130,137,37,144,239,	0,8559,21520,37849,62541,64314,65369,68392,98940,
#Partially deleted in new
chr14	69055209	69118194	chr14:69055209-69118194	0	-	69055209	69055209	8553170	5	402,67,214,130,56,	0,20135,36464,61156,62929,
#Partially deleted in new
chr14	69062427	69152999	chr14:69062427-69152999	0	-	69091840	69118213	789624	7	84,67,214,130,140,37,56,	0,12917,29246,53938,55711,56766,90516,
#Deleted in new
chr14	69083397	69085389	chr14:69083397-69085389	7	+	69083397	69083397	16724991	1	1992,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	69089203	69152983	chr14:69089203-69152983	1	-	69091054	69152978	789624	7	1953,214,130,140,37,144,219,	0,2470,27162,28935,29990,33013,63561,
#Partially deleted in new
chr14	69091673	69153040	chr14:69091673-69153040	0	-	69091673	69122328	789624	6	214,130,137,37,144,97,	0,24692,26465,27520,30543,61270,
#Partially deleted in new
chr14	69119097	69153150	chr14:69119097-69153150	0	-	69119097	69119097	8553170	4	133,144,73,386,	0,3119,30333,33667,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	69143851	69143953	chr14:69143851-69143953	3	-	69143851	69143851	8553170	1	102,	0,
#Deleted in new
chr14	69154310	69154804	chr14:69154310-69154804	3	+	69154310	69154310	8553170	1	494,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	69183019	69214092	chr14:69183019-69214092	3	-	69183019	69183019	8553170	3	1478,162,186,	0,13020,30887,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	69184073	69191420	chr14:69184073-69191420	0	-	69184073	69184073	8553170	2	424,129,	0,7218,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	69190877	69192092	chr14:69190877-69192092	1	-	69190877	69190877	8553170	3	166,175,197,	0,414,1018,
#Partially deleted in new
chr14	69191510	69242358	chr14:69191510-69242358	1	+	69209470	69241100	789624	9	81,380,257,127,332,107,136,357,1475,	0,17913,37305,38961,43189,44535,44896,46064,49373,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	69191528	69242357	chr14:69191528-69242357	0	+	69191528	69191528	8553170	10	63,84,380,257,127,258,107,136,357,1474,	0,12388,17895,37287,38943,43245,44517,44878,46046,49355,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	69191530	69242356	chr14:69191530-69242356	3	+	69228857	69241100	789624	11	61,84,380,90,257,127,332,107,136,357,1473,	0,12386,17893,18581,37285,38941,43169,44515,44876,46044,49353,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	69191532	69209571	chr14:69191532-69209571	0	+	69191532	69191532	8553170	4	59,84,253,148,	0,12384,17297,17891,
#Partially deleted in new
chr14	69191554	69242358	chr14:69191554-69242358	1	+	69228857	69241100	789624	8	37,257,127,332,107,136,357,1475,	0,37261,38917,43145,44491,44852,46020,49329,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	69191765	69244020	chr14:69191765-69244020	1	+	69209470	69241100	789624	9	274,380,257,127,332,107,136,357,3137,	0,17658,37050,38706,42934,44280,44641,45809,49118,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	69191765	69241517	chr14:69191765-69241517	1	+	69228857	69241100	789624	10	274,84,380,257,127,332,107,136,357,634,	0,12151,17658,37050,38706,42934,44280,44641,45809,49118,
#Partially deleted in new
chr14	69191805	69241449	chr14:69191805-69241449	1	+	69228857	69241100	789624	9	234,380,257,127,332,107,136,357,566,	0,17618,37010,38666,42894,44240,44601,45769,49078,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	69191812	69209438	chr14:69191812-69209438	0	+	69191812	69191812	8553170	4	227,84,253,15,	0,12104,17017,17611,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	69191834	69230598	chr14:69191834-69230598	0	+	69228857	69230598	789624	6	205,84,380,90,257,127,	0,12082,17589,18277,36981,38637,
#Partially deleted in new
chr14	69227949	69234745	chr14:69227949-69234745	0	+	69227949	69227949	8553170	4	63,257,127,46,	0,866,2522,6750,
#Partially deleted in new
chr14	69235611	69236543	chr14:69235611-69236543	0	+	69235611	69235611	8553170	2	541,137,	0,795,
#Partially deleted in new
chr14	69239165	69260567	chr14:69239165-69260567	3	-	69239165	69239165	8553170	3	52,248,278,	0,17888,21124,
#Deleted in new
chr14	69259276	69260337	chr14:69259276-69260337	0	+	69259276	69259276	8553170	2	470,160,	0,901,
#Partially deleted in new
chr14	69259641	69320843	chr14:69259641-69320843	0	+	69259641	69259641	8553170	3	156,290,133,	0,536,61069,
#Partially deleted in new
chr14	69259641	69324742	chr14:69259641-69324742	0	+	69259641	69259641	8553170	4	105,290,158,51,	0,536,61069,65050,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr14	69259963	69357033	chr14:69259963-69357033	3	+	69260290	69352168	789624	16	504,158,99,68,66,122,88,85,104,127,93,84,142,126,140,3702,	0,60747,64728,65373,65998,68486,71500,73121,73533,78687,79563,81717,87076,87913,92067,93368,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr14	69260173	69354466	chr14:69260173-69354466	0	+	69260290	69348092	789624	15	294,158,99,68,66,122,88,85,104,127,93,84,142,3865,153,	0,60537,64518,65163,65788,68276,71290,72911,73323,78477,79353,81507,86866,87703,94140,
#Partially deleted in new
chr14	69260200	69352671	chr14:69260200-69352671	1	+	69260290	69352168	789624	15	267,158,99,68,66,122,88,85,104,127,93,84,142,126,641,	0,60510,64491,65136,65761,68249,71263,72884,73296,78450,79326,81480,86839,87676,91830,
#Partially deleted in new
chr14	69260290	69348092	chr14:69260290-69348092	1	+	69260290	69348092	789624	14	177,158,99,68,66,122,88,85,104,127,93,84,142,216,	0,60420,64401,65046,65671,68159,71173,72794,73206,78360,79236,81390,86749,87586,
#Partially deleted in new
chr14	69298540	69326025	chr14:69298540-69326025	0	+	69298540	69298540	8553170	5	131,158,99,68,64,	0,22170,26151,26796,27421,
#Partially deleted in new
chr14	69332521	69339623	chr14:69332521-69339623	0	+	69332521	69332521	8553170	6	82,85,98,79,127,97,	0,563,940,1144,6129,7005,
#Deleted in new
chr14	69352028	69353968	chr14:69352028-69353968	0	+	69352028	69352028	8553170	2	142,198,	0,1742,
#Deleted in new
chr14	69357009	69359308	chr14:69357009-69359308	3	+	69357009	69357009	8553170	1	2299,	0,
#Partially deleted in new
chr14	69380122	69398627	chr14:69380122-69398627	3	-	69380537	69398233	0	4	518,121,88,397,	0,6840,14702,18108,
#Partially deleted in new
chr14	69380134	69398271	chr14:69380134-69398271	0	-	69380134	69380134	8553170	3	506,121,41,	0,6828,18096,
#Partially deleted in new
chr14	69380575	69394926	chr14:69380575-69394926	0	-	69380575	69380575	8553170	2	65,102,	0,14249,
#Partially deleted in new
chr14	69386654	69398299	chr14:69386654-69398299	1	-	69386958	69398233	789624	3	429,88,69,	0,8170,11576,
#Partially deleted in new
chr14	69398014	69453300	chr14:69398014-69453300	0	+	69398014	69398014	8553170	5	436,109,141,198,60,	0,26079,43817,44054,55226,
#Partially deleted in new
chr14	69398385	69459078	chr14:69398385-69459078	0	+	69398385	69398385	8553170	7	218,109,198,69,86,135,716,	0,25708,43683,54855,56426,57346,59977,
#Partially deleted in new
chr14	69398389	69458827	chr14:69398389-69458827	0	+	69398389	69398389	8553170	8	61,109,141,198,69,86,135,465,	0,25704,43442,43679,54851,56422,57342,59973,
#Partially deleted in new
chr14	69398689	69462388	chr14:69398689-69462388	1	+	69399369	69461702	789624	7	776,109,198,69,86,135,692,	0,25404,43379,54551,56122,57042,63007,
#Partially deleted in new
chr14	69398691	69462381	chr14:69398691-69462381	1	+	69399369	69458593	789624	6	774,109,69,86,135,4019,	0,25402,54549,56120,57040,59671,
#Partially deleted in new
chr14	69398691	69460551	chr14:69398691-69460551	3	+	69399369	69458593	789624	7	774,109,198,69,86,135,2189,	0,25402,43377,54549,56120,57040,59671,
#Partially deleted in new
chr14	69398691	69460551	chr14:69398691-69460551	0	+	69399369	69441905	789624	8	774,109,141,198,69,86,135,2189,	0,25402,43140,43377,54549,56120,57040,59671,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	69398707	69429457	chr14:69398707-69429457	0	+	69398707	69398707	8553170	3	758,109,896,	0,25386,29854,
#Partially deleted in new
chr14	69398737	69462381	chr14:69398737-69462381	0	+	69399369	69458593	789624	8	728,109,198,69,86,135,367,685,	0,25356,43331,54503,56074,56994,59625,62959,
#Partially deleted in new
chr14	69399369	69458593	chr14:69399369-69458593	1	+	69399369	69458593	789624	6	96,109,198,86,135,231,	0,24724,42699,55442,56362,58993,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	69454700	69458543	chr14:69454700-69458543	0	+	69454700	69454700	8553170	3	197,135,181,	0,1031,3662,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	69484691	69503690	chr14:69484691-69503690	0	+	69484691	69484691	8553170	2	423,3576,	0,15423,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr14	69484753	69531551	chr14:69484753-69531551	3	+	69484965	69528419	789624	13	361,94,90,77,92,53,95,94,179,133,145,150,3302,	0,15361,15823,16117,16980,18073,37529,39475,41190,41943,42434,43029,43496,
#Deleted in new
chr14	69561018	69561470	chr14:69561018-69561470	7	-	69561018	69561018	16724991	1	452,	0,
#Deleted in new
chr14	69569815	69574837	chr14:69569815-69574837	3	-	69571498	69573622	789624	2	3835,296,	0,4726,
#Partially deleted in new
chr14	69611595	69715142	chr14:69611595-69715142	3	+	69658592	69710979	789624	6	233,201,198,139,428,4189,	0,46917,91799,93008,97081,99358,
#Partially deleted in new
chr14	69611637	69615751	chr14:69611637-69615751	0	+	69611637	69611637	8553170	2	191,233,	0,3881,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	69617121	69617648	chr14:69617121-69617648	3	+	69617121	69617121	8553170	1	527,	0,
#Partially deleted in new
chr14	69658509	69703798	chr14:69658509-69703798	0	+	69658509	69658509	8553170	2	204,404,	0,44885,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	69726899	69772004	chr14:69726899-69772004	3	+	69768156	69771461	789624	9	292,1142,145,71,99,70,74,111,811,	0,39214,41238,41704,41898,42282,43567,44095,44294,
#Partially deleted in new
chr14	69767092	69771973	chr14:69767092-69771973	1	+	69768156	69771461	789624	8	288,145,71,99,70,74,111,780,	0,1045,1511,1705,2089,3374,3902,4101,
#Partially deleted in new
chr14	69767092	69772004	chr14:69767092-69772004	0	+	69767092	69767092	8553170	6	163,145,71,1743,111,811,	0,1045,1511,1705,3902,4101,
#Deleted in new
chr14	69767111	69769594	chr14:69767111-69769594	0	+	69768156	69769559	789624	6	144,145,71,99,70,84,	0,1026,1492,1686,2070,2399,
#Deleted in new
chr14	69767111	69769189	chr14:69767111-69769189	1	+	69768156	69769126	789624	5	144,145,71,99,67,	0,1026,1492,1686,2011,
#Deleted in new
chr14	69767115	69768619	chr14:69767115-69768619	0	+	69767115	69767115	8553170	2	140,482,	0,1022,
#Partially deleted in new
chr14	69767123	69771991	chr14:69767123-69771991	1	+	69768156	69771461	789624	8	132,145,71,99,70,74,111,798,	0,1014,1480,1674,2058,3343,3871,4070,
#Partially deleted in new
chr14	69767156	69771949	chr14:69767156-69771949	1	+	69768156	69771461	789624	8	95,145,62,99,70,74,111,756,	0,981,1456,1641,2025,3310,3838,4037,
#Partially deleted in new
chr14	69767171	69771642	chr14:69767171-69771642	0	+	69767171	69767171	8553170	7	209,145,71,99,1359,111,449,	0,966,1432,1626,2010,3823,4022,
#Partially deleted in new
chr14	69767174	69771108	chr14:69767174-69771108	0	+	69767174	69767174	8553170	6	81,145,71,454,74,114,	0,963,1429,1623,3292,3820,
#Partially deleted in new
chr14	69767181	69772005	chr14:69767181-69772005	0	+	69767181	69767181	8553170	7	199,145,71,454,74,111,809,	0,956,1422,1616,3285,3813,4015,
#Partially deleted in new
chr14	69767185	69771654	chr14:69767185-69771654	0	+	69768156	69769561	789624	8	70,145,71,99,70,1030,111,461,	0,952,1418,1612,1996,2325,3809,4008,
#Deleted in new
chr14	69767239	69768928	chr14:69767239-69768928	0	+	69767239	69767239	8553170	3	141,145,325,	0,898,1364,
#Deleted in new
chr14	69767782	69768675	chr14:69767782-69768675	0	+	69767782	69767782	8553170	2	500,72,	0,821,
#Deleted in new
chr14	69767939	69769644	chr14:69767939-69769644	1	+	69768156	69769561	789624	6	48,145,71,99,70,134,	0,198,664,858,1242,1571,
#Deleted in new
chr14	69767939	69769383	chr14:69767939-69769383	1	+	69768156	69769260	789624	5	48,145,71,99,202,	0,198,664,858,1242,
#Partially deleted in new
chr14	69769745	69771257	chr14:69769745-69771257	0	+	69769745	69769745	8553170	4	297,74,111,64,	0,721,1249,1448,
#Partially deleted in new
chr14	69770447	69772005	chr14:69770447-69772005	0	+	69770447	69770447	8553170	4	93,111,351,89,	0,547,746,1469,
#Deleted in new
chr14	69770880	69771915	chr14:69770880-69771915	0	+	69770880	69770880	8553170	2	225,722,	0,313,
#Partially deleted in new
chr14	69775416	69797289	chr14:69775416-69797289	3	-	69776281	69797155	789624	5	972,197,179,211,490,	0,2916,3765,10680,21383,
#Deleted in new
chr14	69804202	69804331	chr14:69804202-69804331	3	-	69804202	69804202	8553170	1	129,	0,
#Partially deleted in new
chr14	69879415	70030727	chr14:69879415-70030727	1	+	69879678	70030258	789624	12	362,166,113,100,48,57,81,193,83,106,245,486,	0,72722,74004,96299,98502,113001,114984,131338,132069,133970,143787,150826,
#Partially deleted in new
chr14	69879425	70032366	chr14:69879425-70032366	3	+	69879678	70030258	789624	12	352,166,113,100,48,57,81,193,83,106,245,2122,	0,72712,73994,96289,98492,112991,114974,131328,132059,133960,143777,150819,
#Deleted in new
chr14	69885339	69886140	chr14:69885339-69886140	7	-	69885339	69885339	16724991	1	801,	0,
#Partially deleted in new
chr14	69952136	69978088	chr14:69952136-69978088	0	+	69952136	69952136	8553170	4	167,113,100,171,	0,1283,23578,25781,
#Partially deleted in new
chr14	69994238	70011568	chr14:69994238-70011568	0	+	69994238	69994238	8553170	3	242,193,84,	0,16515,17246,
#Partially deleted in new
chr14	70044216	70189070	chr14:70044216-70189070	1	-	70045946	70168422	789624	7	2107,276,100,125,104,1846,692,	0,4550,6791,7773,16619,122422,144162,
#Partially deleted in new
chr14	70044216	70189070	chr14:70044216-70189070	1	-	70045946	70168422	789624	8	2107,276,100,125,18,104,1846,692,	0,4550,6791,7773,11579,16619,122422,144162,
#Partially deleted in new
chr14	70044216	70189070	chr14:70044216-70189070	0	-	70052035	70168422	789624	6	2107,276,100,125,1846,692,	0,4550,6791,7773,122422,144162,
#Partially deleted in new
chr14	70044219	70189070	chr14:70044219-70189070	3	-	70045946	70168422	789624	8	2104,276,100,116,18,107,1846,692,	0,4547,6788,7770,11576,19603,122419,144159,
#Partially deleted in new
chr14	70044254	70080206	chr14:70044254-70080206	1	-	70045946	70060854	789624	6	2069,276,100,125,104,242,	0,4512,6753,7735,16581,35710,
#Partially deleted in new
chr14	70044418	70080180	chr14:70044418-70080180	1	-	70045946	70052091	789624	5	1905,276,100,125,216,	0,4348,6589,7571,35546,
#Partially deleted in new
chr14	70045946	70168484	chr14:70045946-70168484	1	-	70045946	70168422	789624	7	377,276,100,116,18,107,1846,	0,2820,5061,6043,9849,17876,120692,
#Partially deleted in new
chr14	70045946	70168484	chr14:70045946-70168484	1	-	70045946	70168422	789624	7	377,276,100,116,18,104,1846,	0,2820,5061,6043,9849,14889,120692,
#Partially deleted in new
chr14	70046074	70080180	chr14:70046074-70080180	1	-	70048611	70052091	789624	4	2968,100,125,216,	0,4933,5915,33890,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	70059105	70060939	chr14:70059105-70060939	0	-	70059105	70059105	8553170	3	336,48,104,	0,1082,1730,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	70187122	70230187	chr14:70187122-70230187	3	+	70187122	70187122	789624	4	110,153,133,170,	0,5246,40449,42895,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	70223764	70230108	chr14:70223764-70230108	1	+	70223764	70223764	8553170	4	84,133,268,91,	0,3807,5537,6253,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	70223775	70230181	chr14:70223775-70230181	0	+	70223775	70223775	8553170	4	73,191,133,164,	0,231,3796,6242,
#Deleted in new
chr14	70230223	70232426	chr14:70230223-70232426	7	+	70230223	70230223	16724991	1	2203,	0,
#Deleted in new
chr14	70234494	70235095	chr14:70234494-70235095	7	+	70234494	70234494	16724991	1	601,	0,
#Deleted in new
chr14	70245490	70247660	chr14:70245490-70247660	7	-	70245490	70245490	16724991	1	2170,	0,
#Deleted in new
chr14	70245752	70247801	chr14:70245752-70247801	5	-	70245752	70245752	16724991	1	2049,	0,
#Partially deleted in new
chr14	70275295	70291859	chr14:70275295-70291859	3	+	70275295	70275295	8553170	2	65,383,	0,16181,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	70325080	70359731	chr14:70325080-70359731	3	-	70326332	70359587	789624	4	1369,63,72,213,	0,4093,17577,34438,
#Partially deleted in new
chr14	70326063	70417074	chr14:70326063-70417074	3	-	70326332	70416963	789624	6	386,63,72,96,137,175,	0,3110,16594,49612,62406,90836,
#Partially deleted in new
chr14	70326067	70328230	chr14:70326067-70328230	0	-	70326067	70326067	8553170	2	382,65,	0,2098,
#Partially deleted in new
chr14	70326067	70359700	chr14:70326067-70359700	0	-	70326067	70326067	8553170	3	382,63,182,	0,3106,33451,
#Partially deleted in new
chr14	70326281	70359590	chr14:70326281-70359590	0	-	70359291	70359587	789624	4	168,63,81,72,	0,2892,32938,33237,
#Partially deleted in new
chr14	70326349	70416984	chr14:70326349-70416984	0	-	70326349	70416963	789624	6	100,63,99,96,137,85,	0,2824,46683,49326,62120,90550,
#Partially deleted in new
chr14	70326351	70416984	chr14:70326351-70416984	0	-	70326351	70329236	789624	4	98,63,72,85,	0,2822,16306,90548,
#Partially deleted in new
chr14	70326351	70416984	chr14:70326351-70416984	0	-	70326351	70416963	789624	5	98,63,96,137,85,	0,2822,49324,62118,90548,
#Partially deleted in new
chr14	70359581	70416984	chr14:70359581-70416984	0	-	70375712	70416963	789624	4	158,317,96,85,	0,13233,16094,57318,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	70360891	70361088	chr14:70360891-70361088	3	+	70360891	70360891	8553170	1	197,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	70366495	70417045	chr14:70366495-70417045	3	-	70372990	70416963	0	4	6636,96,137,146,	0,9180,21974,50404,
#Partially deleted in new
chr14	70372487	70417061	chr14:70372487-70417061	0	-	70372487	70372487	8553170	3	644,96,162,	0,3188,44412,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	70425811	70547464	chr14:70425811-70547464	3	-	70425811	70425811	8553170	3	279,103,183,	0,27595,121470,
#Partially deleted in new
chr14	70452156	70459899	chr14:70452156-70459899	3	+	70457499	70459668	789624	2	107,2551,	0,5192,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	70453540	70483775	chr14:70453540-70483775	7	-	70453540	70453540	16724991	4	438,77,165,341,	0,1811,6909,29894,
#Deleted in new
chr14	70468880	70471206	chr14:70468880-70471206	5	-	70468880	70468880	16724991	1	2326,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	70468880	70483756	chr14:70468880-70483756	4	-	70468880	70468880	16724991	2	2712,322,	0,14554,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	70496106	70496210	chr14:70496106-70496210	3	+	70496106	70496106	8553170	1	104,	0,
#Partially deleted in new
chr14	70522357	70535015	chr14:70522357-70535015	3	-	70522576	70524907	789624	2	2576,219,	0,12439,
#Partially deleted in new
chr14	70556205	70557478	chr14:70556205-70557478	7	+	70556205	70556205	16724991	2	412,604,	0,669,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	70583220	70600690	chr14:70583220-70600690	1	-	70584093	70600637	789624	9	910,127,28,116,109,83,92,160,75,	0,1596,2535,8045,9659,10075,13390,14397,17395,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	70583588	70600667	chr14:70583588-70600667	3	-	70584812	70600637	789624	8	1355,28,116,109,83,92,160,52,	0,2167,7677,9291,9707,13022,14029,17027,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	70584085	70600655	chr14:70584085-70600655	1	-	70584812	70600637	789624	8	858,28,116,130,83,92,160,40,	0,1670,7180,8794,9210,12525,13532,16530,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	70584524	70600655	chr14:70584524-70600655	1	-	70584891	70600637	789624	7	419,28,109,83,92,160,40,	0,1231,8355,8771,12086,13093,16091,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	70584664	70591814	chr14:70584664-70591814	0	-	70584664	70584664	8553170	3	279,28,549,	0,1091,6601,
#Partially deleted in new
chr14	70591265	70600666	chr14:70591265-70600666	0	-	70591265	70591265	8553170	6	116,109,83,132,160,51,	0,1614,2030,5345,6352,9350,
#Partially deleted in new
chr14	70591287	70600653	chr14:70591287-70600653	0	-	70591287	70591287	8553170	6	94,109,83,88,160,38,	0,1592,2008,5323,6330,9328,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	70592510	70600664	chr14:70592510-70600664	0	-	70592510	70592510	8553170	5	478,83,92,160,49,	0,785,4100,5107,8105,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	70592577	70600655	chr14:70592577-70600655	0	-	70592577	70592577	8553170	4	801,92,160,40,	0,4033,5040,8038,
#Partially deleted in new
chr14	70593313	70641204	chr14:70593313-70641204	3	-	70593313	70593313	8553170	5	65,92,160,97,197,	0,3297,4304,40448,47694,
#Deleted in new
chr14	70594551	70595770	chr14:70594551-70595770	7	+	70594551	70594551	16724991	1	1219,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	70596211	70597830	chr14:70596211-70597830	0	-	70596211	70596211	8553170	2	491,213,	0,1406,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	70596211	70600653	chr14:70596211-70600653	0	-	70596211	70596211	8553170	3	491,160,38,	0,1406,4404,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	70608797	70641298	chr14:70608797-70641298	3	-	70608797	70608797	789624	3	2553,97,291,	0,24964,32210,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	70610085	70610379	chr14:70610085-70610379	3	+	70610085	70610085	8553170	1	294,	0,
#Partially deleted in new
chr14	70641786	70675360	chr14:70641786-70675360	3	+	70642129	70671155	789624	3	749,183,4285,	0,25777,29289,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	70698697	70712153	chr14:70698697-70712153	3	+	70698697	70698697	789624	4	159,206,93,144,	0,1297,4997,13312,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	70722525	70809171	chr14:70722525-70809171	1	-	70730379	70809171	0	12	8339,804,113,69,154,123,241,176,149,181,414,406,	0,10013,11860,13435,15719,17516,19825,26303,27407,38476,78141,86240,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	70722525	70765472	chr14:70722525-70765472	1	-	70730379	70765472	789624	11	8339,804,42,113,154,267,241,176,149,181,31,	0,10013,11231,11860,15719,17372,19825,26303,27407,38476,42916,
#Partially deleted in new
chr14	70729650	70809534	chr14:70729650-70809534	3	-	70730379	70809171	0	13	1214,804,42,113,69,154,123,241,176,149,181,414,769,	0,2888,4106,4735,6310,8594,10391,12700,19178,20282,31351,71016,79115,
#Partially deleted in new
chr14	70729665	70783440	chr14:70729665-70783440	1	-	70730379	70761084	789624	11	1199,804,42,113,154,267,241,176,149,181,218,	0,2873,4091,4720,8579,10232,12685,19163,20267,31336,53557,
#Partially deleted in new
chr14	70729935	70809506	chr14:70729935-70809506	1	-	70730379	70809171	789624	11	929,804,113,154,123,241,176,149,181,414,741,	0,2603,4450,8309,10106,12415,18893,19997,31066,70731,78830,
#Partially deleted in new
chr14	70749552	70752956	chr14:70749552-70752956	0	-	70749552	70749552	8553170	2	529,19,	0,3385,
#Partially deleted in new
chr14	70810204	70815391	chr14:70810204-70815391	0	+	70810204	70810204	8553170	2	87,281,	0,4906,
#Partially deleted in new
chr14	70810329	70815403	chr14:70810329-70815403	3	+	70810329	70810329	8553170	2	336,293,	0,4781,
#Deleted in new
chr14	70822003	70823984	chr14:70822003-70823984	3	+	70822003	70822003	8553170	2	119,165,	0,1816,
#Deleted in new
chr14	70858843	70859429	chr14:70858843-70859429	7	-	70858843	70858843	16724991	1	586,	0,
#Deleted in new
chr14	70906656	70907111	chr14:70906656-70907111	3	-	70906656	70906656	8553170	1	455,	0,
#Partially deleted in new
chr14	70907404	71115382	chr14:70907404-71115382	3	+	70907850	71109935	789624	36	599,209,106,46,90,1707,133,185,91,58,218,154,33,172,111,92,110,106,93,151,142,178,109,130,59,216,254,231,101,151,231,275,206,443,141,5588,	0,39510,54821,60793,61616,69537,81162,88336,102229,104087,105580,111604,115795,118712,119367,121295,126024,126526,128660,137728,139559,140402,143247,144478,148099,150104,166140,168784,180925,181787,194585,195990,197830,201199,202047,202390,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	70907404	71012838	chr14:70907404-71012838	0	+	70907404	70907404	8553170	10	599,209,106,46,90,1707,133,103,91,1347,	0,39510,54821,60793,61616,69537,81162,88336,102229,104087,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	70907669	70942940	chr14:70907669-70942940	0	+	70907669	70907669	8553170	2	334,68,	0,35203,
#Partially deleted in new
chr14	70907738	71110118	chr14:70907738-71110118	1	+	70907850	71109935	789624	34	265,209,106,46,90,1707,91,58,203,154,33,172,111,92,110,106,93,151,142,178,109,130,59,216,254,231,101,151,231,275,206,443,141,324,	0,39176,54487,60459,61282,69203,101895,103753,105261,111270,115461,118378,119033,120961,125690,126192,128326,137394,139225,140068,142913,144144,147765,149770,165806,168450,180591,181453,194251,195656,197496,200865,201713,202056,
#Partially deleted in new
chr14	70946881	70969271	chr14:70946881-70969271	0	+	70946881	70946881	8553170	4	242,106,46,251,	0,15344,21316,22139,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	70965364	70977290	chr14:70965364-70977290	0	+	70965364	70965364	8553170	4	68,46,90,349,	0,2833,3656,11577,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	70965369	70977151	chr14:70965369-70977151	0	+	70965369	70965369	8553170	5	63,46,90,141,210,	0,2828,3651,4489,11572,
#Partially deleted in new
chr14	70978377	71009868	chr14:70978377-71009868	0	+	70978377	70978377	8553170	2	271,235,	0,31256,
#Partially deleted in new
chr14	71013030	71110153	chr14:71013030-71110153	0	+	71013030	71109935	789624	25	172,154,33,172,111,92,110,106,93,151,142,178,109,130,59,254,231,101,151,231,275,206,443,141,359,	0,5978,10169,13086,13741,15669,20398,20900,23034,32102,33933,34776,37621,38852,42473,60514,63158,75299,76161,88959,90364,92204,95573,96421,96764,
#Deleted in new
chr14	71026194	71027202	chr14:71026194-71027202	0	+	71026194	71026194	8553170	2	94,381,	0,627,
#Deleted in new
chr14	71031685	71031970	chr14:71031685-71031970	7	-	71031685	71031685	16724991	1	285,	0,
#Deleted in new
chr14	71044374	71044640	chr14:71044374-71044640	7	-	71044374	71044374	16724991	1	266,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	71050657	71060742	chr14:71050657-71060742	0	+	71050657	71050657	8553170	5	103,130,59,216,75,	0,1225,4846,6851,10010,
#Partially deleted in new
chr14	71078650	71102189	chr14:71078650-71102189	0	+	71078650	71078650	8553170	4	89,101,151,200,	0,9679,10541,23339,
#Deleted in new
chr14	71085481	71085833	chr14:71085481-71085833	7	-	71085481	71085481	16724991	1	352,	0,
#Deleted in new
chr14	71109019	71110161	chr14:71109019-71110161	0	+	71109019	71110065	789624	4	27,141,37,179,	0,432,775,963,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	71141124	71143253	chr14:71141124-71143253	3	-	71141124	71141124	8553170	1	2129,	0,
#Deleted in new
chr14	71181455	71182106	chr14:71181455-71182106	3	+	71181455	71181455	8553170	1	651,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	71212632	71218216	chr14:71212632-71218216	3	+	71212632	71212632	8553170	2	310,411,	0,5173,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	71219099	71222724	chr14:71219099-71222724	3	+	71219099	71219099	8553170	1	3625,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	71292728	71321814	chr14:71292728-71321814	3	-	71292728	71292728	8553170	3	174,194,141,	0,2534,28945,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	71307169	71311359	chr14:71307169-71311359	1	-	71307169	71307169	8553170	3	194,122,148,	0,3388,4042,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	71320448	71587765	chr14:71320448-71587765	0	+	71320448	71320448	8553170	7	55,60,67,36,103,53,195,	0,673,93499,177405,192294,256086,267122,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	71320472	71573800	chr14:71320472-71573800	0	+	71320472	71320472	8553170	9	31,60,104,125,67,103,42,59,312,	0,649,59022,80321,93475,192270,208226,208839,253016,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	71320475	71573513	chr14:71320475-71573513	0	+	71320475	71320475	8553170	9	28,60,125,67,67,103,42,59,25,	0,646,80318,93472,97654,192267,208223,208836,253013,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	71320475	71587694	chr14:71320475-71587694	0	+	71320475	71320475	8553170	7	28,60,125,103,59,53,124,	0,646,80318,192267,208836,256059,267095,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	71320475	71573653	chr14:71320475-71573653	0	+	71320475	71320475	8553170	8	28,60,67,67,103,42,59,165,	0,646,93472,97654,192267,208223,208836,253013,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	71320514	71587622	chr14:71320514-71587622	0	+	71320514	71320514	8553170	6	38,60,67,103,59,52,	0,607,93433,192228,208797,267056,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	71321390	71587969	chr14:71321390-71587969	0	+	71587872	71587969	789624	5	141,103,42,59,399,	0,191352,207308,207921,266180,
#Partially deleted in new
chr14	71330341	71330738	chr14:71330341-71330738	7	-	71330341	71330341	16724991	1	397,	0,
#Partially deleted in new
chr14	71398336	71398407	chr14:71398336-71398407	3	+	71398336	71398336	789624	1	71,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	71413953	71416283	chr14:71413953-71416283	0	+	71413953	71413953	8553170	2	149,308,	0,2022,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	71448688	71448958	chr14:71448688-71448958	3	+	71448688	71448688	8553170	1	270,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	71467184	71575086	chr14:71467184-71575086	0	+	71467184	71467184	8553170	4	63,103,59,1598,	0,45558,62127,106304,
#Partially deleted in new
chr14	71529324	71739405	chr14:71529324-71739405	1	+	71587872	71739161	789624	21	46,1800,131,189,175,104,158,574,275,270,147,125,119,443,240,166,247,147,115,85,388,	0,58246,89432,94723,121010,129008,131985,141794,143023,156037,169656,173056,175897,179897,194322,195345,200730,204341,205952,208916,209693,
#Partially deleted in new
chr14	71529324	71741229	chr14:71529324-71741229	3	+	71587872	71739161	789624	22	46,1800,131,189,175,104,158,574,275,270,147,125,63,119,443,240,166,247,147,115,85,2212,	0,58246,89432,94723,121010,129008,131985,141794,143023,156037,169656,173056,175396,175897,179897,194322,195345,200730,204341,205952,208916,209693,
#Deleted in new
chr14	71586268	71590354	chr14:71586268-71590354	3	-	71586268	71586268	8553170	2	3023,70,	0,4016,
#Partially deleted in new
chr14	71586280	71739401	chr14:71586280-71739401	1	+	71587872	71739161	789624	21	648,1800,131,189,175,104,158,574,275,270,147,125,119,443,240,166,247,147,115,82,384,	0,1290,32476,37767,64054,72052,75029,84838,86067,99081,112700,116100,118941,122941,137366,138389,143774,147385,148996,151963,152737,
#Partially deleted in new
chr14	71598233	71739341	chr14:71598233-71739341	1	+	71618833	71739161	789624	20	98,131,189,175,104,158,574,275,270,147,125,119,443,240,166,247,147,115,82,324,	0,20523,25814,52101,60099,63076,72885,74114,87128,100747,104147,106988,110988,125413,126436,131821,135432,137043,140010,140784,
#Partially deleted in new
chr14	71618755	71661449	chr14:71618755-71661449	0	+	71618755	71661449	789624	5	132,189,220,104,140,	0,5292,31534,39577,42554,
#Partially deleted in new
chr14	71685361	71709342	chr14:71685361-71709342	0	+	71685361	71685361	8553170	4	270,125,620,121,	0,17019,19359,23860,
#Partially deleted in new
chr14	71702311	71739367	chr14:71702311-71739367	0	+	71702311	71702311	8553170	10	194,119,443,240,166,247,147,115,85,350,	0,2910,6910,21335,22358,27743,31354,32965,35929,36706,
#Partially deleted in new
chr14	71730191	71735593	chr14:71730191-71735593	0	+	71730191	71730191	8553170	3	110,147,317,	0,3474,5085,
#Partially deleted in new
chr14	71734926	71739794	chr14:71734926-71739794	3	-	71734926	71734926	8553170	3	525,147,160,	0,1696,4708,
#Partially deleted in new
chr14	71932438	72562476	chr14:71932438-72562476	1	+	71964791	72562467	0	18	503,104,100,51,107,52,65,77,82,75,99,62,111,126,187,90,54,60,	0,32333,419656,522089,525832,527193,533319,537568,540433,542186,544303,545829,562713,577715,585912,603747,607602,629978,
#Partially deleted in new
chr14	71932616	72562467	chr14:71932616-72562467	1	+	71964791	72562467	0	17	325,104,100,51,107,52,65,77,82,75,99,62,111,126,187,90,51,	0,32155,419478,521911,525654,527015,533141,537390,540255,542008,544125,545651,562535,577537,585734,603569,629800,
#Partially deleted in new
chr14	71933115	72566526	chr14:71933115-72566526	3	+	71964791	72562467	0	17	187,104,100,51,107,52,65,77,82,75,99,62,111,126,187,90,4110,	0,31656,418979,521412,525155,526516,532642,536891,539756,541509,543626,545152,562036,577038,585235,603070,629301,
#Partially deleted in new
chr14	71933144	72562864	chr14:71933144-72562864	0	+	71964791	72540074	0	19	158,104,100,51,107,52,65,77,82,75,99,62,111,126,187,90,50,67,448,	0,31627,418950,521383,525126,526487,532613,536862,539727,541480,543597,545123,562007,577009,585206,603041,606900,620145,629272,
#Partially deleted in new
chr14	71933231	72562592	chr14:71933231-72562592	1	+	71964791	72562467	0	18	71,104,100,51,107,52,65,77,82,75,99,62,111,126,187,90,54,176,	0,31540,418863,521296,525039,526400,532526,536775,539640,541393,543510,545036,561920,576922,585119,602954,606809,629185,
#Partially deleted in new
chr14	71964791	72537713	chr14:71964791-72537713	1	+	71964791	72537532	0	16	84,100,51,107,52,65,77,82,75,99,62,111,126,187,90,196,	0,387303,489736,493479,494840,500966,505215,508080,509833,511950,513476,530360,545362,553559,571394,572726,
#Partially deleted in new
chr14	71964791	72540324	chr14:71964791-72540324	1	+	71964791	72540270	0	17	84,100,51,107,52,65,77,82,75,99,62,111,126,187,90,54,75,	0,387303,489736,493479,494840,500966,505215,508080,509833,511950,513476,530360,545362,553559,571394,575249,575458,
#Partially deleted in new
chr14	71964791	72540324	chr14:71964791-72540324	1	+	71964791	72540276	0	17	84,100,51,107,52,65,77,82,75,99,62,111,126,187,90,54,54,	0,387303,489736,493479,494840,500966,505215,508080,509833,511950,513476,530360,545362,553559,571394,575249,575479,
#Partially deleted in new
chr14	71964791	72540333	chr14:71964791-72540333	1	+	71964791	72540270	0	17	84,100,51,107,52,65,77,82,75,99,62,111,126,187,90,54,75,	0,387303,489736,493479,494840,500966,505215,508080,509833,511950,513476,530360,545362,553559,571394,575249,575467,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	72022406	72022516	chr14:72022406-72022516	3	-	72022406	72022406	8553170	1	110,	0,
#Partially deleted in new
chr14	72352091	72566529	chr14:72352091-72566529	1	+	72352115	72562467	789624	15	103,51,107,52,65,77,82,75,99,62,111,126,187,90,4113,	0,102436,106179,107540,113666,117915,120780,122533,124650,126176,143060,158062,166259,184094,210325,
#Partially deleted in new
chr14	72352092	72566529	chr14:72352092-72566529	1	+	72352115	72562467	789624	15	102,51,107,52,65,77,82,75,99,62,126,187,90,54,4113,	0,102435,106178,107539,113665,117914,120779,122532,124649,126175,158061,166258,184093,187948,210324,
#Partially deleted in new
chr14	72352092	72566529	chr14:72352092-72566529	1	+	72352115	72562467	789624	16	102,51,107,52,65,77,82,75,99,62,111,126,187,90,54,4113,	0,102435,106178,107539,113665,117914,120779,122532,124649,126175,143059,158061,166258,184093,187948,210324,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	72420978	72474069	chr14:72420978-72474069	0	+	72420978	72420978	8553170	10	207,137,51,107,52,24,65,77,82,184,	0,609,33549,37292,38653,43715,44779,49028,51893,52907,
#Partially deleted in new
chr14	72454519	72550674	chr14:72454519-72550674	1	+	72454550	72550497	789624	17	59,107,52,65,77,82,75,99,62,111,126,187,90,54,151,211,220,	0,3751,5112,11238,15487,18352,20105,22222,23748,40632,55634,63831,81666,85521,86950,92637,95935,
#Partially deleted in new
chr14	72454519	72478331	chr14:72454519-72478331	0	+	72454519	72454519	8553170	10	59,107,52,65,216,77,82,75,99,64,	0,3751,5112,11238,15066,15487,18352,20105,22222,23748,
#Partially deleted in new
chr14	72459668	72562754	chr14:72459668-72562754	1	+	72465780	72562750	0	14	15,27,65,77,82,75,99,62,111,126,187,90,54,40,	0,5022,6089,10338,13203,14956,17073,18599,35483,50485,58682,76517,80372,103046,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	72473986	72477260	chr14:72473986-72477260	0	+	72473986	72473986	8553170	3	94,75,519,	0,638,2755,
#Partially deleted in new
chr14	72511606	72515847	chr14:72511606-72515847	0	+	72511606	72511606	8553170	3	210,191,147,	0,2268,4094,
#Deleted in new
chr14	72516819	72516898	chr14:72516819-72516898	3	+	72516819	72516819	5263520	1	79,	0,
#Partially deleted in new
chr14	72540040	72562589	chr14:72540040-72562589	0	+	72540040	72562589	789624	3	54,67,173,	0,13249,22376,
#Partially deleted in new
chr14	72540061	72562837	chr14:72540061-72562837	0	+	72540061	72540061	8553170	2	33,421,	0,22355,
#Partially deleted in new
chr14	72552579	72595125	chr14:72552579-72595125	3	-	72552579	72552579	8553170	3	203,37,414,	0,41747,42132,
#Partially deleted in new
chr14	72619295	72894088	chr14:72619295-72894088	3	-	72619296	72894088	0	11	72,82,113,129,138,79,96,128,108,161,32,	0,607,10328,54944,73780,95127,104337,112511,133968,152437,274761,
#Partially deleted in new
chr14	72661042	72894116	chr14:72661042-72894116	1	-	72671135	72894088	0	10	1791,1387,129,138,79,96,128,108,161,60,	0,8909,13197,32033,53380,62590,70764,92221,110690,233014,
#Partially deleted in new
chr14	72661042	72892649	chr14:72661042-72892649	1	-	72671135	72892343	789624	10	1791,1387,129,138,79,96,128,108,161,503,	0,8909,13197,32033,53380,62590,70764,92221,110690,231104,
#Partially deleted in new
chr14	72661042	72894116	chr14:72661042-72894116	1	-	72671135	72879865	0	11	1791,1387,129,138,79,96,128,108,161,144,60,	0,8909,13197,32033,53380,62590,70764,92221,110690,218761,233014,
#Partially deleted in new
chr14	72661048	72724105	chr14:72661048-72724105	0	-	72661048	72661048	8553170	7	1785,1387,129,138,79,96,141,	0,8903,13191,32027,53374,62584,62916,
#Partially deleted in new
chr14	72661875	72892649	chr14:72661875-72892649	0	-	72671135	72892343	789624	10	958,1387,129,138,79,96,128,108,161,503,	0,8076,12364,31200,52547,61757,69931,91388,109857,230271,
#Partially deleted in new
chr14	72661875	72894101	chr14:72661875-72894101	0	-	72671135	72894088	0	10	958,1387,129,138,79,96,128,108,161,45,	0,8076,12364,31200,52547,61757,69931,91388,109857,232181,
#Partially deleted in new
chr14	72670852	72894101	chr14:72670852-72894101	1	-	72671135	72879865	0	10	486,129,138,79,96,128,108,161,144,45,	0,3387,22223,43570,52780,60954,82411,100880,208951,223204,
#Partially deleted in new
chr14	72670999	72679302	chr14:72670999-72679302	0	-	72670999	72670999	8553170	3	339,129,101,	0,3240,8202,
#Partially deleted in new
chr14	72671310	72723771	chr14:72671310-72723771	0	-	72671310	72671310	8553170	5	28,129,138,79,139,	0,2929,21765,43112,52322,
#Deleted in new
chr14	72671310	72675771	chr14:72671310-72675771	0	-	72671310	72671310	8553170	3	28,129,325,	0,2929,4136,
#Partially deleted in new
chr14	72674021	72714504	chr14:72674021-72714504	0	-	72674021	72674021	8553170	3	342,138,82,	0,19054,40401,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	72701761	72704280	chr14:72701761-72704280	3	+	72701761	72701761	8553170	2	384,1775,	0,744,
#Partially deleted in new
chr14	72723631	72742711	chr14:72723631-72742711	0	-	72723631	72723631	8553170	3	97,128,270,	0,8175,18810,
#Partially deleted in new
chr14	72723631	72731667	chr14:72723631-72731667	0	-	72723631	72723631	8553170	2	97,250,	0,7786,
#Partially deleted in new
chr14	72771743	72836483	chr14:72771743-72836483	0	-	72771743	72771743	8553170	2	150,400,	0,64340,
#Partially deleted in new
chr14	72806009	72836483	chr14:72806009-72836483	0	-	72806009	72806009	8553170	3	48,98,400,	0,765,30074,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	72853223	72853331	chr14:72853223-72853331	3	-	72853223	72853223	8553170	1	108,	0,
#Partially deleted in new
chr14	72926331	72959121	chr14:72926331-72959121	3	+	72937978	72958805	0	14	212,100,101,158,80,103,144,50,80,99,98,174,115,510,	0,11639,13470,13888,15413,16662,19552,20810,25466,27832,28054,29191,30054,32280,
#Partially deleted in new
chr14	72926376	72959592	chr14:72926376-72959592	1	+	72937978	72958805	789624	8	167,100,101,158,144,174,115,981,	0,11594,13425,13843,19507,29146,30009,32235,
#Partially deleted in new
chr14	72926450	72959121	chr14:72926450-72959121	0	+	72937978	72940283	789624	14	93,100,101,126,80,103,140,50,80,102,98,174,115,510,	0,11520,13351,13801,15294,16543,19437,20691,25347,27710,27935,29072,29935,32161,
#Partially deleted in new
chr14	72926477	72959703	chr14:72926477-72959703	1	+	72940326	72958805	0	13	66,101,158,80,103,144,50,80,99,98,174,115,1092,	0,13324,13742,15267,16516,19406,20664,25320,27686,27908,29045,29908,32134,
#Partially deleted in new
chr14	72926479	72958946	chr14:72926479-72958946	1	+	72937978	72958805	0	12	64,100,101,158,144,50,80,102,98,174,115,335,	0,11491,13322,13740,19404,20662,25318,27681,27906,29043,29906,32132,
#Partially deleted in new
chr14	72926486	72959644	chr14:72926486-72959644	1	+	72937978	72958805	0	14	57,100,101,158,80,103,144,50,80,102,77,174,115,1033,	0,11484,13315,13733,15258,16507,19397,20655,25311,27674,27899,29036,29899,32125,
#Partially deleted in new
chr14	72926498	72940526	chr14:72926498-72940526	0	+	72926498	72926498	8553170	4	45,100,101,307,	0,11472,13303,13721,
#Partially deleted in new
chr14	72926500	72941902	chr14:72926500-72941902	0	+	72926500	72926500	8553170	5	43,100,101,158,158,	0,11470,13301,13719,15244,
#Partially deleted in new
chr14	72926776	72940281	chr14:72926776-72940281	0	+	72926776	72926776	8553170	5	153,164,100,101,62,	0,8246,11194,13025,13443,
#Partially deleted in new
chr14	72926784	72941784	chr14:72926784-72941784	0	+	72926784	72926784	8553170	5	145,100,101,158,40,	0,11186,13017,13435,14960,
#Deleted in new
chr14	72929611	72929930	chr14:72929611-72929930	7	-	72929611	72929611	16724991	1	319,	0,
#Partially deleted in new
chr14	72929699	72941824	chr14:72929699-72941824	0	+	72929699	72929699	8553170	5	121,100,101,158,80,	0,8271,10102,10520,12045,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	72937988	72958112	chr14:72937988-72958112	1	+	72940326	72956508	789624	12	82,101,158,80,103,144,50,80,99,98,174,1727,	0,1813,2231,3756,5005,7895,9153,13809,16175,16397,17534,18397,
#Partially deleted in new
chr14	72941908	72945927	chr14:72941908-72945927	0	+	72941908	72941908	8553170	4	185,233,103,44,	0,361,1085,3975,
#Partially deleted in new
chr14	72942718	72946029	chr14:72942718-72946029	0	+	72942718	72942718	8553170	2	378,146,	0,3165,
#Deleted in new
chr14	72958714	72959375	chr14:72958714-72959375	0	+	72958714	72958714	8553170	2	314,265,	0,396,
#Partially deleted in new
chr14	72960594	72961993	chr14:72960594-72961993	7	+	72960594	72960594	16724991	2	163,126,	0,1273,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	72963644	72964008	chr14:72963644-72964008	7	-	72963644	72963644	16724991	1	364,	0,
#Partially deleted in new
chr14	72969450	73027106	chr14:72969450-73027106	1	-	72969709	73024508	789624	13	306,222,114,181,171,118,98,109,107,215,505,917,181,	0,1442,4629,5328,6100,8476,8686,9410,12338,23692,28360,54575,57475,
#Partially deleted in new
chr14	72969451	73027131	chr14:72969451-73027131	1	-	72970881	73024508	789624	12	1663,114,181,171,76,98,109,107,215,505,917,206,	0,4628,5327,6099,8475,8685,9409,12337,23691,28359,54574,57474,
#Partially deleted in new
chr14	72969451	73027212	chr14:72969451-73027212	3	-	72970881	73024508	789624	12	1663,114,181,171,118,98,109,107,215,505,917,287,	0,4628,5327,6099,8475,8685,9409,12337,23691,28359,54574,57474,
#Partially deleted in new
chr14	72970877	72986944	chr14:72970877-72986944	1	-	72970881	72981853	789624	9	237,114,181,171,118,98,109,107,48,	0,3202,3901,4673,7049,7259,7983,10911,16019,
#Partially deleted in new
chr14	72970881	72986985	chr14:72970881-72986985	1	-	72970881	72981853	789624	9	233,114,181,171,118,98,109,107,94,	0,3198,3897,4669,7045,7255,7979,10907,16010,
#Partially deleted in new
chr14	72970929	72975941	chr14:72970929-72975941	0	-	72970929	72970929	8553170	4	185,114,181,391,	0,3150,3849,4621,
#Deleted in new
chr14	72974077	72975207	chr14:72974077-72975207	0	-	72974077	72974077	8553170	2	116,429,	0,701,
#Partially deleted in new
chr14	72974827	72978995	chr14:72974827-72978995	0	-	72974827	72974827	8553170	4	132,171,118,135,	0,723,3099,4033,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	72977963	72979225	chr14:72977963-72979225	0	-	72977963	72977963	8553170	3	81,98,365,	0,173,897,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	73040618	73040914	chr14:73040618-73040914	3	-	73040618	73040618	8553170	1	296,	0,
#Partially deleted in new
chr14	73057924	73059415	chr14:73057924-73059415	3	-	73057924	73057924	8553170	2	860,140,	0,1351,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr14	73058435	73123898	chr14:73058435-73123898	3	+	73071641	73119805	0	19	270,121,50,168,58,161,186,54,84,287,223,90,74,151,325,275,99,48,4186,	0,13191,17883,18933,25058,29565,38479,40944,41231,44756,47423,47760,49390,50906,52395,53092,53716,55850,61277,
#Partially deleted in new
chr14	73058531	73120391	chr14:73058531-73120391	1	+	73071641	73119805	0	20	174,68,121,50,168,58,161,186,54,84,287,223,90,74,151,325,275,99,48,679,	0,11321,13095,17787,18837,24962,29469,38383,40848,41135,44660,47327,47664,49294,50810,52299,52996,53620,55754,61181,
#Partially deleted in new
chr14	73058541	73120129	chr14:73058541-73120129	0	+	73058541	73058541	8553170	17	164,121,50,168,58,161,186,54,3812,223,90,74,151,972,99,48,417,	0,13085,17777,18827,24952,29459,38373,40838,41125,47317,47654,49284,50800,52289,53610,55744,61171,
#Partially deleted in new
chr14	73058546	73101179	chr14:73058546-73101179	1	+	73071641	73099786	0	9	159,121,50,168,58,161,186,54,1513,	0,13080,17772,18822,24947,29454,38368,40833,41120,
#Partially deleted in new
chr14	73058548	73101179	chr14:73058548-73101179	1	+	73071641	73100318	0	11	157,121,50,168,58,161,186,54,84,62,466,	0,13078,17770,18820,24945,29452,38366,40831,41118,41752,42165,
#Partially deleted in new
chr14	73058667	73083551	chr14:73058667-73083551	0	+	73071641	73083551	789624	5	144,121,50,168,58,	0,12959,17651,18701,24826,
#Partially deleted in new
chr14	73068107	73068618	chr14:73068107-73068618	7	-	73068107	73068107	16724991	1	511,	0,
#Partially deleted in new
chr14	73071636	73120229	chr14:73071636-73120229	0	+	73071641	73088379	0	18	111,50,168,161,105,186,54,84,287,223,90,74,151,325,275,99,48,517,	0,4682,5732,16364,16733,25278,27743,28030,31555,34222,34559,36189,37705,39194,39891,40515,42649,48076,
#Partially deleted in new
chr14	73097035	73100995	chr14:73097035-73100995	0	+	73097035	73100318	789624	4	65,54,84,695,	0,2344,2631,3265,
#Partially deleted in new
chr14	73106279	73114333	chr14:73106279-73114333	0	+	73106279	73106279	8553170	8	6,74,151,325,74,275,99,48,	0,1546,3062,4551,5029,5248,5872,8006,
#Partially deleted in new
chr14	73107301	73121313	chr14:73107301-73121313	0	+	73107301	73107301	8553170	6	598,151,972,99,48,1601,	0,2040,3529,4850,6984,12411,
#Partially deleted in new
chr14	73109130	73110909	chr14:73109130-73110909	0	+	73109130	73109130	8553170	2	362,79,	0,1700,
#Partially deleted in new
chr14	73136417	73173644	chr14:73136417-73173644	0	+	73148019	73173644	789624	5	31,82,128,251,79,	0,11377,11549,34379,37148,
#Partially deleted in new
chr14	73136434	73170998	chr14:73136434-73170998	0	+	73148019	73170998	789624	4	149,82,117,202,	0,11360,11543,34362,
#Partially deleted in new
chr14	73136434	73170912	chr14:73136434-73170912	0	+	73148019	73170912	789624	5	149,99,82,128,116,	0,690,11360,11532,34362,
#Partially deleted in new
chr14	73136435	73170994	chr14:73136435-73170994	0	+	73148019	73170994	789624	4	144,82,128,198,	0,11359,11531,34361,
#Partially deleted in new
chr14	73136436	73171007	chr14:73136436-73171007	0	+	73148019	73171007	789624	4	143,82,140,211,	0,11358,11530,34360,
#Partially deleted in new
chr14	73136443	73173680	chr14:73136443-73173680	0	+	73148019	73173680	789624	5	136,82,128,251,115,	0,11351,11523,34353,37122,
#Partially deleted in new
chr14	73136444	73170996	chr14:73136444-73170996	0	+	73148019	73170996	789624	4	139,124,128,200,	0,11308,11522,34352,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	73136446	73223691	chr14:73136446-73223691	3	+	73148019	73219289	0	12	137,82,140,251,142,68,221,99,87,174,119,4558,	0,11348,11520,34350,37119,50406,56197,61584,69939,75322,80679,82687,
#Partially deleted in new
chr14	73136446	73220401	chr14:73136446-73220401	1	+	73148019	73219289	0	12	137,82,128,251,142,68,221,99,87,174,119,1268,	0,11348,11520,34350,37119,50406,56197,61584,69939,75322,80679,82687,
#Partially deleted in new
chr14	73136446	73174204	chr14:73136446-73174204	1	+	73148019	73173782	0	5	137,82,140,251,639,	0,11348,11520,34350,37119,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	73136450	73171050	chr14:73136450-73171050	0	+	73148019	73171050	789624	5	133,102,82,128,254,	0,2846,11344,11516,34346,
#Partially deleted in new
chr14	73136455	73173694	chr14:73136455-73173694	0	+	73148019	73173694	789624	5	128,82,164,251,129,	0,11339,11487,34341,37110,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	73136476	73170884	chr14:73136476-73170884	0	+	73136476	73136476	8553170	6	103,41,82,128,130,88,	0,1635,11318,11490,23532,34320,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	73136495	73171036	chr14:73136495-73171036	0	+	73148019	73171036	789624	5	88,41,82,140,240,	0,1616,11299,11471,34301,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	73136517	73173707	chr14:73136517-73173707	0	+	73148019	73160107	789624	6	62,82,128,130,251,142,	0,11277,11449,23491,34279,37048,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	73136540	73170909	chr14:73136540-73170909	0	+	73148019	73170909	789624	7	43,99,41,49,82,128,113,	0,584,1571,9537,11254,11426,34256,
#Partially deleted in new
chr14	73136816	73220401	chr14:73136816-73220401	1	+	73148019	73219289	0	12	407,82,128,251,142,68,221,99,87,174,119,1268,	0,10978,11150,33980,36749,50036,55827,61214,69569,74952,80309,82317,
#Partially deleted in new
chr14	73147491	73170895	chr14:73147491-73170895	0	+	73148019	73170895	789624	3	385,128,99,	0,475,23305,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	73148019	73217158	chr14:73148019-73217158	0	+	73148019	73211858	0	10	87,251,142,68,221,99,87,92,174,33,	0,22777,25546,38833,44624,50011,58366,60804,63749,69106,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	73148019	73219289	chr14:73148019-73219289	0	+	73148019	73211858	0	11	75,251,142,68,221,99,87,92,174,119,156,	0,22777,25546,38833,44624,50011,58366,60804,63749,69106,71114,
#Partially deleted in new
chr14	73148019	73219289	chr14:73148019-73219289	1	+	73148019	73219289	0	9	87,251,142,68,221,99,87,119,156,	0,22777,25546,38833,44624,50011,58366,69106,71114,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	73167828	73220401	chr14:73167828-73220401	1	+	73170985	73219289	789624	10	1633,251,142,68,221,99,87,174,119,1268,	0,2968,5737,19024,24815,30202,38557,43940,49297,51305,
#Deleted in new
chr14	73189762	73190004	chr14:73189762-73190004	7	+	73189762	73189762	16724991	1	242,	0,
#Partially deleted in new
chr14	73197709	73211853	chr14:73197709-73211853	0	+	73197709	73197709	8553170	3	420,87,85,	0,8676,14059,
#Partially deleted in new
chr14	73206152	73219396	chr14:73206152-73219396	0	+	73206152	73206152	8553170	4	320,174,119,263,	0,5616,10973,12981,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr14	73237496	73274640	chr14:73237496-73274640	3	+	73239778	73272664	789624	26	96,60,116,61,103,131,124,173,124,127,208,183,142,81,277,121,139,478,138,125,139,138,128,109,167,2146,	0,2276,7147,8139,8576,12487,13410,14167,14521,15152,16257,17016,17380,21482,21772,23212,23659,24853,26148,26714,27091,27873,29004,29226,31060,34998,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr14	73237496	73274637	chr14:73237496-73274637	1	+	73239778	73272664	789624	27	96,60,116,61,103,131,124,81,173,124,127,208,183,142,81,277,121,139,478,138,125,139,138,128,109,167,2143,	0,2276,7147,8139,8576,12487,13410,13989,14167,14521,15152,16257,17016,17380,21482,21772,23212,23659,24853,26148,26714,27091,27873,29004,29226,31060,34998,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr14	73237578	73273365	chr14:73237578-73273365	0	+	73239778	73264019	789624	24	14,60,116,61,103,131,124,173,124,127,208,183,142,81,277,121,139,478,138,35,125,139,138,871,	0,2194,7065,8057,8494,12405,13328,14085,14439,15070,16175,16934,17298,21400,21690,23130,23577,24771,26066,26431,26632,27009,27791,34916,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr14	73237579	73273365	chr14:73237579-73273365	0	+	73239778	73263985	789624	27	13,60,116,61,103,131,124,81,173,124,127,208,183,142,81,277,121,139,138,103,125,139,138,128,109,167,871,	0,2193,7064,8056,8493,12404,13327,13906,14084,14438,15069,16174,16933,17297,21399,21689,23129,23576,26065,26362,26631,27008,27790,28921,29143,30977,34915,
#Partially deleted in new
chr14	73239615	73272754	chr14:73239615-73272754	1	+	73239778	73272664	789624	26	217,116,61,103,131,124,81,173,124,127,208,183,142,81,277,121,139,478,138,125,139,138,128,109,167,260,	0,5028,6020,6457,10368,11291,11870,12048,12402,13033,14138,14897,15261,19363,19653,21093,21540,22734,24029,24595,24972,25754,26885,27107,28941,32879,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr14	73239624	73273003	chr14:73239624-73273003	1	+	73239778	73272664	789624	26	208,116,61,103,131,124,81,173,124,127,208,183,142,81,277,121,139,430,138,125,139,138,128,109,167,509,	0,5019,6011,6448,10359,11282,11861,12039,12393,13024,14129,14888,15252,19354,19644,21084,21531,22773,24020,24586,24963,25745,26876,27098,28932,32870,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	73242650	73245979	chr14:73242650-73245979	3	-	73242650	73242650	789624	2	2594,456,	0,2873,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	73246817	73246880	chr14:73246817-73246880	3	-	73246817	73246817	8553170	1	63,	0,
#Deleted in new
chr14	73249775	73251018	chr14:73249775-73251018	0	+	73249775	73249775	8553170	2	339,112,	0,1131,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	73261155	73274620	chr14:73261155-73274620	0	+	73261155	73263650	789624	10	139,478,160,125,139,138,128,109,167,2126,	0,1194,2467,3055,3432,4214,5345,5567,7401,11339,
#Deleted in new
chr14	73261165	73264576	chr14:73261165-73264576	0	+	73261165	73261165	8553170	4	129,478,79,21,	0,1184,3091,3390,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	73262049	73274623	chr14:73262049-73274623	0	+	73262049	73262049	8553170	8	1733,125,139,138,128,109,167,2129,	0,2161,2538,3320,4451,4673,6507,10445,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	73262499	73274620	chr14:73262499-73274620	0	+	73262499	73272561	789624	6	328,138,125,139,138,2126,	0,1145,1711,2088,2870,9995,
#Partially deleted in new
chr14	73268378	73272933	chr14:73268378-73272933	0	+	73268378	73268378	8553170	2	345,439,	0,4116,
#Partially deleted in new
chr14	73272181	73274081	chr14:73272181-73274081	3	-	73272181	73272181	8553170	3	527,107,143,	0,620,1757,
#Partially deleted in new
chr14	73275209	73355769	chr14:73275209-73355769	1	-	73276577	73355751	0	10	2084,144,147,294,205,141,75,33,75,144,	0,4071,7149,8871,11900,17524,22001,41180,47920,80416,
#Partially deleted in new
chr14	73275209	73355769	chr14:73275209-73355769	1	-	73276577	73355751	0	9	2084,144,147,294,205,141,75,75,144,	0,4071,7149,8871,11900,17524,22001,47920,80416,
#Partially deleted in new
chr14	73275209	73355769	chr14:73275209-73355769	1	-	73276577	73355751	0	9	2084,147,294,205,141,75,33,75,144,	0,7149,8871,11900,17524,22001,41180,47920,80416,
#Partially deleted in new
chr14	73275209	73355769	chr14:73275209-73355769	1	-	73276577	73355751	0	7	2084,205,141,75,33,75,144,	0,11900,17524,22001,41180,47920,80416,
#Partially deleted in new
chr14	73275215	73458519	chr14:73275215-73458519	1	-	73276577	73355751	0	12	2078,147,294,205,141,75,33,75,141,132,105,27,	0,7143,8865,11894,17518,21995,41174,47914,80410,134721,182413,183277,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	73275217	73299375	chr14:73275217-73299375	1	-	73276577	73292751	789624	7	2076,144,147,294,205,141,2165,	0,4063,7141,8863,11892,17516,21993,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	73277208	73285562	chr14:73277208-73285562	0	-	73277208	73277208	8553170	3	85,147,1482,	0,5150,6872,
#Partially deleted in new
chr14	73281413	73287257	chr14:73281413-73287257	0	-	73281413	73281413	8553170	4	124,147,294,148,	0,945,2667,5696,
#Partially deleted in new
chr14	73282244	73287173	chr14:73282244-73287173	0	-	73282244	73282244	8553170	3	261,294,64,	0,1836,4865,
#Partially deleted in new
chr14	73284253	73458523	chr14:73284253-73458523	0	-	73284253	73355751	789624	9	121,205,141,75,33,75,141,132,31,	0,2856,8480,12957,32136,38876,71372,125683,174239,
#Partially deleted in new
chr14	73284253	73458283	chr14:73284253-73458283	0	-	73284253	73355751	789624	9	121,205,141,75,33,75,141,132,116,	0,2856,8480,12957,32136,38876,71372,125683,173914,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	73286192	73458546	chr14:73286192-73458546	0	-	73286192	73286192	8553170	7	1122,141,75,75,141,132,54,	0,6541,11018,36937,69433,123744,172300,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	73286224	73297876	chr14:73286224-73297876	0	-	73286224	73286224	8553170	3	1090,141,666,	0,6509,10986,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	73322800	73458577	chr14:73322800-73458577	0	-	73322800	73322800	8553170	5	404,141,85,132,85,	0,32825,44096,87136,135692,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	73409149	73458571	chr14:73409149-73458571	0	-	73409149	73409149	8553170	3	540,132,79,	0,787,49343,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	73409975	73463642	chr14:73409975-73463642	3	-	73409975	73409975	8553170	4	93,272,161,168,	0,49058,52553,53499,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	73458849	73463635	chr14:73458849-73463635	3	-	73458849	73458849	8553170	3	456,161,161,	0,3679,4625,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	73459008	73463585	chr14:73459008-73463585	1	-	73459008	73459008	8553170	3	297,89,111,	0,3592,4466,
#Partially deleted in new
chr14	73459008	73466167	chr14:73459008-73466167	0	-	73459008	73459008	8553170	2	297,21,	0,7138,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	73460934	73463618	chr14:73460934-73463618	1	-	73460934	73460934	789624	3	330,161,144,	0,1594,2540,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	73462245	73463625	chr14:73462245-73463625	0	-	73462245	73462245	8553170	2	444,151,	0,1229,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	73462497	73463879	chr14:73462497-73463879	0	+	73462497	73462497	8553170	2	166,388,	0,994,
#Partially deleted in new
chr14	73478483	73491780	chr14:73478483-73491780	0	-	73478483	73478483	8553170	2	359,25,	0,13272,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr14	73478485	73558921	chr14:73478485-73558921	1	-	73478605	73523152	789624	18	357,59,160,79,190,70,181,119,105,161,162,144,204,141,188,953,79,171,	0,14580,16742,18115,19669,20585,22064,24409,27981,29648,30826,33520,35545,40537,42366,43786,51680,80265,
#Partially deleted in new
chr14	73478486	73558947	chr14:73478486-73558947	3	-	73478605	73523152	789624	17	356,59,160,79,190,70,181,119,105,161,162,144,204,141,188,953,197,	0,14579,16741,18114,19668,20584,22063,24408,27980,29647,30825,33519,35544,40536,42365,43785,80264,
#Deleted in new
chr14	73490963	73493392	chr14:73490963-73493392	3	+	73491017	73492943	0	1	2429,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	73517232	73520648	chr14:73517232-73520648	3	-	73517232	73517232	8553170	2	251,686,	0,2730,
#Partially deleted in new
chr14	73522579	73531212	chr14:73522579-73531212	0	-	73522579	73523152	789624	2	645,179,	0,8454,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	73522877	73530610	chr14:73522877-73530610	3	+	73522877	73522877	8553170	2	60,459,	0,7274,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	73523035	73531197	chr14:73523035-73531197	0	-	73523035	73523152	789624	3	189,234,129,	0,5917,8033,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	73523044	73558945	chr14:73523044-73558945	0	-	73523044	73523152	789624	4	180,169,79,195,	0,4184,7121,35706,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	73537113	73543794	chr14:73537113-73543794	3	+	73537421	73543655	789624	3	765,203,745,	0,4379,5936,
#Partially deleted in new
chr14	73537393	73543710	chr14:73537393-73543710	1	+	73537421	73543655	789624	3	485,203,583,	0,4099,5734,
#Partially deleted in new
chr14	73539220	73539781	chr14:73539220-73539781	7	-	73539220	73539220	16724991	1	561,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	73567619	73575653	chr14:73567619-73575653	0	+	73569300	73573486	789624	4	510,119,203,746,	0,1658,5768,7288,
#Partially deleted in new
chr14	73569058	73575653	chr14:73569058-73575653	3	+	73569240	73575513	0	3	825,203,746,	0,4329,5849,
#Partially deleted in new
chr14	73569114	73575653	chr14:73569114-73575653	1	+	73569426	73575513	789624	4	126,529,203,746,	0,240,4273,5793,
#Partially deleted in new
chr14	73569284	73575658	chr14:73569284-73575658	1	+	73569300	73575513	789624	3	599,203,751,	0,4103,5623,
#Partially deleted in new
chr14	73571158	73571667	chr14:73571158-73571667	7	-	73571158	73571158	16724991	1	509,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	73580693	73582918	chr14:73580693-73582918	3	+	73580693	73580693	8553170	1	2225,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	73591705	73596496	chr14:73591705-73596496	3	+	73591959	73595654	0	3	711,203,1448,	0,1996,3343,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	73610944	73619721	chr14:73610944-73619721	0	+	73617174	73619721	789624	4	97,82,203,488,	0,571,6045,8289,
#Partially deleted in new
chr14	73612497	73619864	chr14:73612497-73619864	3	+	73612571	73619839	789624	3	535,199,631,	0,4496,6736,
#Partially deleted in new
chr14	73616699	73633778	chr14:73616699-73633778	3	-	73616699	73616699	8553170	2	511,118,	0,16961,
#Partially deleted in new
chr14	73616843	73619888	chr14:73616843-73619888	1	+	73617174	73619839	789624	2	349,655,	0,2390,
#Partially deleted in new
chr14	73619689	73633941	chr14:73619689-73633941	1	-	73619689	73619689	8553170	2	127,281,	0,13971,
#Deleted in new
chr14	73631474	73632019	chr14:73631474-73632019	7	+	73631474	73631474	16724991	1	545,	0,
#Partially deleted in new
chr14	73644874	73689493	chr14:73644874-73689493	0	+	73687333	73689493	789624	5	168,56,56,127,119,	0,17112,26667,42384,44500,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	73644998	73703732	chr14:73644998-73703732	3	+	73645039	73695942	789624	8	44,39,110,56,56,127,141,7831,	0,9848,13848,16988,26543,42260,44376,50903,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	73645008	73697760	chr14:73645008-73697760	1	+	73687333	73695942	789624	7	34,39,56,56,127,141,1859,	0,9838,16978,26533,42250,44366,50893,
#Partially deleted in new
chr14	73645017	73696156	chr14:73645017-73696156	1	+	73645039	73695942	789624	4	25,127,141,255,	0,42241,44357,50884,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	73658846	73689517	chr14:73658846-73689517	0	+	73687333	73689517	789624	6	110,56,56,147,127,143,	0,3140,12695,14098,28412,30528,
#Partially deleted in new
chr14	73658861	73696075	chr14:73658861-73696075	0	+	73658861	73687311	789624	4	95,56,127,174,	0,3125,28397,37040,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	73659563	73659660	chr14:73659563-73659660	3	-	73659563	73659563	8553170	1	97,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	73711782	73714372	chr14:73711782-73714372	3	-	73712577	73713639	789624	1	2590,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	73715121	73787258	chr14:73715121-73787258	1	-	73719300	73740008	789624	12	4380,213,150,89,76,104,143,67,346,300,1696,157,	0,6175,7576,10150,10911,11482,11708,12336,14518,21876,23438,71980,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	73715123	73727133	chr14:73715123-73727133	0	-	73715123	73715123	8553170	7	4378,213,150,89,76,104,304,	0,6173,7574,10148,10909,11480,11706,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	73715130	73760298	chr14:73715130-73760298	1	-	73719300	73740008	789624	12	4371,213,150,89,76,104,143,67,346,300,1696,536,	0,6166,7567,10141,10902,11473,11699,12327,14509,21867,23429,44632,
#Partially deleted in new
chr14	73718842	73740255	chr14:73718842-73740255	3	-	73718842	73740008	789624	12	166,197,213,150,89,76,104,143,67,346,300,1696,	0,462,2454,3855,6429,7190,7761,7987,8615,10797,18155,19717,
#Partially deleted in new
chr14	73719369	73721624	chr14:73719369-73721624	0	-	73719369	73719369	8553170	2	132,328,	0,1927,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	73719381	73739474	chr14:73719381-73739474	0	-	73729972	73739474	789624	12	120,213,150,89,76,104,143,67,346,110,300,915,	0,1915,3316,5890,6651,7222,7448,8076,10258,10688,17616,19178,
#Partially deleted in new
chr14	73719382	73760298	chr14:73719382-73760298	0	-	73719382	73740008	789624	12	119,213,150,89,76,104,143,67,346,300,1696,536,	0,1914,3315,5889,6650,7221,7447,8075,10257,17615,19177,40380,
#Partially deleted in new
chr14	73722365	73725339	chr14:73722365-73725339	0	-	73722365	73722365	8553170	2	482,68,	0,2906,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	73723161	73729176	chr14:73723161-73729176	0	-	73723161	73723161	8553170	4	2199,76,104,2347,	0,2871,3442,3668,
#Partially deleted in new
chr14	73739811	73755016	chr14:73739811-73755016	0	-	73739811	73740008	789624	2	444,114,	0,15091,
#Partially deleted in new
chr14	73740030	73790285	chr14:73740030-73790285	0	-	73740030	73740030	8553170	3	225,135,174,	0,49794,50081,
#Partially deleted in new
chr14	73758746	73758819	chr14:73758746-73758819	3	+	73758746	73758746	5263520	1	73,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	73787359	73803217	chr14:73787359-73803217	3	+	73787359	73787359	789624	3	150,90,333,	0,1667,15525,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	73788964	73803270	chr14:73788964-73803270	0	+	73788964	73788964	8553170	2	152,386,	0,13920,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	73822558	73830135	chr14:73822558-73830135	3	-	73822558	73822558	789624	2	934,240,	0,7337,
#Partially deleted in new
chr14	73840519	73840609	chr14:73840519-73840609	7	-	73840519	73840519	16724991	1	90,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	73851843	73885456	chr14:73851843-73885456	1	+	73858862	73884177	0	10	161,84,119,192,171,210,122,88,40,1356,	0,6972,8695,22179,25154,27252,28211,29361,30555,32257,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	73851845	73886827	chr14:73851845-73886827	3	+	73858862	73884177	0	10	98,84,119,192,171,210,122,88,40,2727,	0,6970,8693,22177,25152,27250,28209,29359,30553,32255,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	73851927	73874627	chr14:73851927-73874627	0	+	73851927	73851927	8553170	5	77,84,119,192,44,	0,6888,8611,22095,22656,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	73851945	73861726	chr14:73851945-73861726	0	+	73851945	73851945	8553170	4	59,84,119,643,	0,6870,8593,9138,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	73851946	73885459	chr14:73851946-73885459	1	+	73858862	73884177	0	10	174,84,119,192,171,210,122,88,40,1359,	0,6869,8592,22076,25051,27149,28108,29258,30452,32154,
#Partially deleted in new
chr14	73851970	73932278	chr14:73851970-73932278	3	+	73858862	73892094	789624	22	146,84,119,192,171,122,88,40,27,182,136,178,219,192,151,182,90,126,141,205,128,776,	0,6845,8568,22052,25027,28084,29234,30428,32130,40056,41826,43266,44345,46100,51989,52931,57370,69009,70095,70522,71424,79532,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	73858060	73858165	chr14:73858060-73858165	3	-	73858060	73858060	8553170	1	105,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	73858137	73884579	chr14:73858137-73884579	0	+	73858137	73858137	8553170	7	762,119,192,3179,88,40,479,	0,2401,15885,18860,23067,24261,25963,
#Partially deleted in new
chr14	73860537	73884579	chr14:73860537-73884579	1	+	73877051	73884177	789624	8	120,121,171,210,122,88,40,479,	0,13485,16460,18558,19517,20667,21861,23563,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	73873688	73885435	chr14:73873688-73885435	3	-	73873688	73873688	8553170	2	24,1993,	0,9754,
#Deleted in new
chr14	73885391	73885555	chr14:73885391-73885555	0	-	73885391	73885391	8553170	1	164,	0,
#Partially deleted in new
chr14	73886616	73931597	chr14:73886616-73931597	1	+	73892175	73931541	789624	11	299,182,136,192,151,182,90,126,141,128,95,	0,5410,7180,11454,17343,18285,22724,34363,35449,36778,44886,
#Partially deleted in new
chr14	73886733	73898100	chr14:73886733-73898100	0	+	73893922	73898100	789624	4	182,136,219,30,	0,7063,9582,11337,
#Partially deleted in new
chr14	73886804	73932278	chr14:73886804-73932278	1	+	73892175	73931541	789624	11	111,182,136,219,192,151,182,90,126,128,776,	0,5222,6992,9511,11266,17155,18097,22536,34175,36590,44698,
#Partially deleted in new
chr14	73886807	73931840	chr14:73886807-73931840	0	+	73892175	73896469	789624	12	108,182,136,187,192,151,182,90,126,141,128,338,	0,5219,6989,9540,11263,17152,18094,22533,34172,35258,36587,44695,
#Partially deleted in new
chr14	73886858	73909605	chr14:73886858-73909605	0	+	73886858	73886858	8553170	8	92,182,136,219,192,151,182,265,	0,5168,6938,9457,11212,17101,18043,22482,
#Partially deleted in new
chr14	73886858	73905046	chr14:73886858-73905046	0	+	73886858	73886858	8553170	6	57,136,187,192,151,145,	0,6938,9489,11212,17101,18043,
#Partially deleted in new
chr14	73886858	73896523	chr14:73886858-73896523	0	+	73892175	73896523	789624	4	69,182,136,208,	0,5168,6938,9457,
#Partially deleted in new
chr14	73886858	73898229	chr14:73886858-73898229	0	+	73893922	73898229	789624	4	57,136,219,159,	0,6938,9457,11212,
#Partially deleted in new
chr14	73886858	73896506	chr14:73886858-73896506	0	+	73892175	73896506	789624	4	57,182,157,191,	0,5168,6917,9457,
#Partially deleted in new
chr14	73886860	73923525	chr14:73886860-73923525	0	+	73886860	73886860	8553170	9	55,81,136,219,192,182,90,126,131,	0,5166,6936,9455,11210,18041,22480,34119,36534,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr14	73886870	73932278	chr14:73886870-73932278	0	+	73892175	73905018	789624	13	45,182,136,219,192,151,153,90,126,141,128,122,776,	0,5156,6926,9445,11200,17089,18060,22470,34109,35195,36524,40236,44632,
#Partially deleted in new
chr14	73886870	73932511	chr14:73886870-73932511	3	+	73892175	73931541	789624	12	45,182,136,219,192,151,182,90,126,141,128,1009,	0,5156,6926,9445,11200,17089,18031,22470,34109,35195,36524,44632,
#Partially deleted in new
chr14	73887057	73896370	chr14:73887057-73896370	0	+	73892175	73896370	789624	5	376,92,182,136,55,	0,1215,4969,6739,9258,
#Partially deleted in new
chr14	73888249	73904035	chr14:73888249-73904035	0	+	73892175	73896469	789624	6	115,182,136,187,192,76,	0,3777,5547,8098,9821,15710,
#Partially deleted in new
chr14	73891849	73896357	chr14:73891849-73896357	0	+	73892175	73896357	789624	3	359,136,42,	0,1947,4466,
#Partially deleted in new
chr14	73892024	73932247	chr14:73892024-73932247	1	+	73893922	73931541	789624	11	83,136,219,192,151,182,90,126,141,128,745,	0,1772,4291,6046,11935,12877,17316,28955,30041,31370,39478,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	73893288	73898518	chr14:73893288-73898518	1	+	73893922	73898345	789624	3	644,219,448,	0,3027,4782,
#Partially deleted in new
chr14	73896163	73922639	chr14:73896163-73922639	2	-	73896163	73896163	8553170	2	405,64,	0,26412,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	73902205	73927232	chr14:73902205-73927232	1	+	73902205	73927232	789624	8	21,151,153,90,126,141,128,126,	0,1754,2725,7135,18774,19860,21189,24901,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	73903699	73921065	chr14:73903699-73921065	0	+	73904977	73921065	789624	4	411,182,90,86,	0,1202,5641,17280,
#Partially deleted in new
chr14	73904031	73922846	chr14:73904031-73922846	0	+	73904031	73904031	8553170	5	79,182,90,141,354,	0,870,5309,18034,18461,
#Partially deleted in new
chr14	73904908	73921327	chr14:73904908-73921327	0	+	73904908	73904908	8553170	3	175,90,348,	0,4432,16071,
#Deleted in new
chr14	73905266	73905636	chr14:73905266-73905636	3	+	73905266	73905266	8553170	1	370,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	73913066	73938114	chr14:73913066-73938114	1	-	73913066	73913066	8553170	6	1806,1174,161,140,100,167,	0,2566,9509,22882,24535,24881,
#Partially deleted in new
chr14	73920145	73923525	chr14:73920145-73923525	0	+	73921047	73923525	789624	3	960,141,131,	0,1920,3249,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	73920995	73931664	chr14:73920995-73931664	0	+	73920995	73931509	789624	5	110,141,128,122,162,	0,1070,2399,6111,10507,
#Partially deleted in new
chr14	73931500	73938094	chr14:73931500-73938094	0	-	73932432	73938094	789624	4	978,140,100,147,	0,4448,6101,6447,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	73932509	73950414	chr14:73932509-73950414	3	-	73934255	73950215	789624	9	1885,140,100,165,128,347,551,320,442,	0,3439,5092,5438,8416,9859,11825,13776,17463,
#Partially deleted in new
chr14	73949925	73963108	chr14:73949925-73963108	1	+	73950092	73962999	789624	12	255,135,59,124,131,108,63,108,203,116,167,139,	0,3509,5525,5879,8221,9045,9236,9489,11247,11529,11811,13044,
#Partially deleted in new
chr14	73949939	73963065	chr14:73949939-73963065	0	+	73950092	73955842	789624	11	241,135,124,131,108,63,108,203,116,167,90,	0,3495,5865,8207,9031,9222,9475,11233,11515,11797,13036,
#Partially deleted in new
chr14	73950218	73959355	chr14:73950218-73959355	0	+	73950218	73950218	8553170	5	70,135,124,932,194,	0,3216,5586,7928,8943,
#Partially deleted in new
chr14	73950251	73963108	chr14:73950251-73963108	1	+	73953437	73962999	789624	11	244,135,124,131,108,63,108,203,116,167,139,	0,3183,5553,7895,8719,8910,9163,10921,11203,11485,12718,
#Partially deleted in new
chr14	73950292	73963670	chr14:73950292-73963670	3	+	73950332	73962999	789624	12	203,135,59,124,131,108,63,108,203,116,167,701,	0,3142,5158,5512,7854,8678,8869,9122,10880,11162,11444,12677,
#Partially deleted in new
chr14	73950298	73958875	chr14:73950298-73958875	0	+	73950298	73950298	8553170	5	197,135,59,124,729,	0,3136,5152,5506,7848,
#Partially deleted in new
chr14	73950300	73959481	chr14:73950300-73959481	0	+	73950332	73955842	789624	6	195,135,124,131,108,320,	0,3134,5504,7846,8670,8861,
#Partially deleted in new
chr14	73950307	73963112	chr14:73950307-73963112	1	+	73950332	73963091	789624	5	188,135,59,124,143,	0,3127,5143,5497,12662,
#Partially deleted in new
chr14	73950309	73955960	chr14:73950309-73955960	0	+	73950309	73950309	8553170	3	288,135,510,	0,3125,5141,
#Partially deleted in new
chr14	73950309	73956000	chr14:73950309-73956000	0	+	73950309	73950309	8553170	4	186,135,59,196,	0,3125,5141,5495,
#Partially deleted in new
chr14	73950309	73953812	chr14:73950309-73953812	0	+	73950309	73950309	8553170	2	186,378,	0,3125,
#Partially deleted in new
chr14	73950309	73956482	chr14:73950309-73956482	0	+	73950309	73950309	8553170	5	186,135,59,124,54,	0,3125,5141,5495,6119,
#Partially deleted in new
chr14	73950309	73958943	chr14:73950309-73958943	0	+	73950309	73950309	8553170	4	186,135,124,797,	0,3125,5495,7837,
#Partially deleted in new
chr14	73950502	73956752	chr14:73950502-73956752	0	+	73953437	73955483	789624	5	95,135,59,124,324,	0,2932,4948,5302,5926,
#Partially deleted in new
chr14	73950523	73961293	chr14:73950523-73961293	0	+	73953437	73961293	789624	8	74,135,124,131,108,63,108,121,	0,2911,5281,7623,8447,8638,8891,10649,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	73953437	73956790	chr14:73953437-73956790	0	+	73953437	73953437	8553170	2	132,986,	0,2367,
#Partially deleted in new
chr14	73955329	73961295	chr14:73955329-73961295	0	+	73955329	73955329	8553170	6	599,131,108,63,108,123,	0,2817,3641,3832,4085,5843,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr14	73958009	74015928	chr14:73958009-74015928	1	-	73959529	73988102	789624	16	1544,116,57,141,102,62,80,89,36,76,144,80,287,117,60,105,	0,12000,13842,14874,15867,16914,17926,18314,19014,19289,25008,28804,29876,49686,53081,57814,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	73958491	73963111	chr14:73958491-73963111	0	+	73958491	73958491	8553170	5	733,1961,116,167,142,	0,923,2963,3245,4478,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	73958906	73960866	chr14:73958906-73960866	0	+	73958906	73958906	8553170	3	172,63,1452,	0,255,508,
#Partially deleted in new
chr14	73959498	73963108	chr14:73959498-73963108	0	+	73959498	73959498	8553170	4	24,203,116,139,	0,1674,1956,3471,
#Partially deleted in new
chr14	73961083	73972934	chr14:73961083-73972934	0	-	73961532	73972934	789624	4	467,116,57,51,	0,8926,10768,11800,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr14	73962692	74019332	chr14:73962692-74019332	3	-	73966927	73988102	789624	16	4322,116,57,141,102,62,80,89,36,76,144,80,287,60,107,83,	0,7317,9159,10191,11184,12231,13243,13631,14331,14606,20325,24121,25193,48398,53131,56557,
#Partially deleted in new
chr14	73976332	73996308	chr14:73976332-73996308	0	-	73976332	73988102	789624	7	80,36,76,144,80,287,201,	0,691,966,6685,10481,11553,19775,
#Partially deleted in new
chr14	73986223	74019310	chr14:73986223-74019310	1	-	73987086	73988102	789624	5	922,287,60,107,61,	0,1662,24867,29600,33026,
#Partially deleted in new
chr14	73988146	74019399	chr14:73988146-74019399	0	-	73988146	73988146	8553170	4	26,60,107,926,	0,22944,27677,30327,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	73996516	74019297	chr14:73996516-74019297	0	-	73996516	73996516	8553170	4	260,60,83,48,	0,14574,19331,22733,
#Partially deleted in new
chr14	74003395	74003470	chr14:74003395-74003470	7	+	74003395	74003395	16724991	1	75,	0,
#Partially deleted in new
chr14	74008929	74019271	chr14:74008929-74019271	0	-	74008929	74008929	8553170	4	263,60,107,22,	0,2161,6894,10320,
#Partially deleted in new
chr14	74019352	74048074	chr14:74019352-74048074	0	+	74034096	74048074	789624	6	182,66,144,81,71,145,	0,9831,14675,21212,26707,28577,
#Partially deleted in new
chr14	74019355	74066092	chr14:74019355-74066092	3	+	74019478	74064699	789624	12	179,229,66,144,81,71,145,494,102,75,115,1405,	0,3560,9828,14672,21209,26704,28574,30346,36228,37550,37788,45332,
#Partially deleted in new
chr14	74019447	74040817	chr14:74019447-74040817	1	+	74034096	74040687	789624	4	87,66,144,253,	0,9736,14580,21117,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr14	74031796	74082863	chr14:74031796-74082863	0	+	74031796	74031796	8553170	13	115,144,81,145,108,494,102,75,115,157,54,49,76,	0,2231,8768,16133,16549,17905,23787,25109,25347,46399,49270,49429,50991,
#Partially deleted in new
chr14	74046090	74048592	chr14:74046090-74048592	0	+	74046090	74046090	8553170	2	40,663,	0,1839,
#Partially deleted in new
chr14	74055532	74057459	chr14:74055532-74057459	0	+	74055532	74055532	8553170	3	153,75,316,	0,1373,1611,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	74056849	74084493	chr14:74056849-74084493	3	-	74060641	74084394	789624	12	3897,99,180,182,190,122,303,79,162,75,63,147,	0,7972,8331,9855,10530,12010,14345,15046,15353,15687,18105,27497,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	74060246	74084449	chr14:74060246-74084449	0	-	74060246	74060246	8553170	12	500,99,180,182,190,122,466,79,162,75,63,103,	0,4575,4934,6458,7133,8613,10948,11649,11956,12290,14708,24100,
#Partially deleted in new
chr14	74060394	74084447	chr14:74060394-74084447	1	-	74060641	74084394	789624	12	352,99,180,182,190,122,303,79,123,75,63,101,	0,4427,4786,6310,6985,8465,10800,11501,11847,12142,14560,23952,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	74060414	74069258	chr14:74060414-74069258	1	-	74060641	74068862	789624	6	332,99,180,182,190,399,	0,4407,4766,6290,6965,8445,
#Partially deleted in new
chr14	74070699	74084492	chr14:74070699-74084492	0	-	74070699	74070699	8553170	6	798,79,162,75,63,146,	0,1196,1503,1837,4255,13647,
#Partially deleted in new
chr14	74071367	74084420	chr14:74071367-74084420	0	-	74071367	74071367	8553170	5	202,79,162,63,74,	0,528,835,3587,12979,
#Partially deleted in new
chr14	74071877	74084447	chr14:74071877-74084447	0	-	74071877	74071877	8553170	4	487,75,63,101,	0,659,3077,12469,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	74084795	74201235	chr14:74084795-74201235	3	+	74084962	74198977	0	6	198,75,38,67,84,2314,	0,6436,11152,12998,16359,114126,
#Partially deleted in new
chr14	74084955	74199251	chr14:74084955-74199251	0	+	74084955	74198977	789624	5	38,75,56,67,330,	0,6276,10974,12838,113966,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	74084959	74200438	chr14:74084959-74200438	0	+	74084959	74084959	8553170	5	642,75,38,67,1517,	0,6272,10988,12834,113962,
#Partially deleted in new
chr14	74084962	74114295	chr14:74084962-74114295	0	+	74084962	74084962	8553170	6	31,75,38,67,84,290,	0,6269,10985,12831,16192,29043,
#Partially deleted in new
chr14	74085504	74097860	chr14:74085504-74097860	0	+	74085504	74085504	8553170	4	97,69,38,67,	0,5733,10443,12289,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	74174455	74174753	chr14:74174455-74174753	3	+	74174455	74174455	8553170	1	298,	0,
#Partially deleted in new
chr14	74192588	74192823	chr14:74192588-74192823	7	+	74192588	74192588	16724991	1	235,	0,
#Partially deleted in new
chr14	74239471	74262738	chr14:74239471-74262738	3	+	74239561	74260919	789624	5	460,85,124,181,2145,	0,1710,5693,20130,21122,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr14	74285422	74303056	chr14:74285422-74303056	3	-	74286460	74302912	789624	19	1107,116,77,53,50,37,92,209,90,92,122,95,51,126,117,140,128,119,182,	0,1278,2387,2784,3293,4060,4604,4868,6864,7128,7325,7731,9725,10431,10910,12507,14125,14727,17452,
#Partially deleted in new
chr14	74285995	74290452	chr14:74285995-74290452	0	-	74286789	74290452	789624	8	534,116,77,53,106,37,92,162,	0,705,1814,2211,2664,3487,4031,4295,
#Partially deleted in new
chr14	74286013	74302937	chr14:74286013-74302937	0	-	74298055	74302912	789624	17	803,77,53,50,37,92,209,90,92,122,95,51,126,117,140,119,63,	0,1796,2193,2702,3469,4013,4277,6273,6537,6734,7140,9134,9840,10319,11916,14136,16861,
#Partially deleted in new
chr14	74286283	74288768	chr14:74286283-74288768	0	-	74286389	74288768	789624	5	283,116,77,53,53,	0,417,1526,1923,2432,
#Partially deleted in new
chr14	74286344	74302945	chr14:74286344-74302945	0	-	74298055	74302912	789624	18	185,116,77,53,50,37,92,209,90,92,122,95,51,126,117,140,119,71,	0,356,1465,1862,2371,3138,3682,3946,5942,6206,6403,6809,8803,9509,9988,11585,13805,16530,
#Partially deleted in new
chr14	74286396	74290452	chr14:74286396-74290452	0	-	74286789	74290452	789624	7	420,77,53,106,37,92,162,	0,1413,1810,2263,3086,3630,3894,
#Partially deleted in new
chr14	74286525	74288641	chr14:74286525-74288641	0	-	74286525	74286525	8553170	2	291,832,	0,1284,
#Partially deleted in new
chr14	74286569	74302969	chr14:74286569-74302969	0	-	74299593	74302912	789624	16	247,77,53,50,37,92,209,90,92,122,95,126,117,140,128,95,	0,1240,1637,2146,2913,3457,3721,5717,5981,6178,6584,9284,9763,11360,12978,16305,
#Partially deleted in new
chr14	74286709	74292826	chr14:74286709-74292826	0	-	74288752	74292826	789624	9	107,77,53,50,37,209,90,92,79,	0,1100,1497,2006,2773,3581,5577,5841,6038,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	74287810	74289953	chr14:74287810-74289953	0	-	74287810	74287810	8553170	2	76,1747,	0,396,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	74289078	74295914	chr14:74289078-74295914	0	-	74289078	74289078	8553170	8	207,37,209,90,92,501,51,61,	0,404,1212,3208,3472,3669,6069,6775,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	74289126	74294425	chr14:74289126-74294425	3	-	74289126	74289126	8553170	2	252,1115,	0,4184,
#Deleted in new
chr14	74289300	74290499	chr14:74289300-74290499	0	-	74289300	74289300	8553170	3	219,92,209,	0,726,990,
#Partially deleted in new
chr14	74290346	74302997	chr14:74290346-74302997	0	-	74290346	74290346	8553170	4	153,128,119,123,	0,9201,9803,12528,
#Partially deleted in new
chr14	74290377	74302992	chr14:74290377-74302992	0	-	74299593	74302912	789624	9	122,90,92,122,51,126,117,128,118,	0,1909,2173,2370,4770,5476,5955,9170,12497,
#Partially deleted in new
chr14	74292311	74302916	chr14:74292311-74302916	0	-	74299593	74302912	789624	9	65,92,122,95,51,126,117,128,42,	0,239,436,842,2836,3542,4021,7236,10563,
#Partially deleted in new
chr14	74292321	74303055	chr14:74292321-74303055	0	-	74298055	74302912	789624	9	55,92,122,51,126,117,140,119,181,	0,229,426,2826,3532,4011,5608,7828,10553,
#Partially deleted in new
chr14	74292550	74295940	chr14:74292550-74295940	0	-	74292850	74295940	789624	5	92,122,126,51,87,	0,197,603,2597,3303,
#Partially deleted in new
chr14	74292603	74302959	chr14:74292603-74302959	0	-	74299593	74302912	789624	6	39,122,51,117,128,85,	0,144,2544,3729,6944,10271,
#Partially deleted in new
chr14	74292747	74302918	chr14:74292747-74302918	0	-	74295956	74302912	789624	7	122,157,51,126,117,119,44,	0,406,2400,3106,3585,7402,10127,
#Partially deleted in new
chr14	74292774	74302987	chr14:74292774-74302987	1	-	74292850	74302912	789624	7	95,51,117,140,128,119,113,	0,2373,3558,5155,6773,7375,10100,
#Partially deleted in new
chr14	74292830	74302910	chr14:74292830-74302910	0	-	74292850	74302910	789624	7	39,51,126,117,140,128,36,	0,2317,3023,3502,5099,6717,10044,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	74294053	74298069	chr14:74294053-74298069	0	-	74294053	74294053	8553170	3	1145,126,1737,	0,1800,2279,
#Partially deleted in new
chr14	74295729	74302934	chr14:74295729-74302934	0	-	74295729	74295729	8553170	4	250,117,119,60,	0,603,4420,7145,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	74295878	74302959	chr14:74295878-74302959	0	-	74298055	74302912	789624	5	101,117,431,119,85,	0,454,1760,4271,6996,
#Partially deleted in new
chr14	74297835	74302987	chr14:74297835-74302987	0	-	74297835	74297835	8553170	4	234,128,119,113,	0,1712,2314,5039,
#Partially deleted in new
chr14	74299060	74302995	chr14:74299060-74302995	0	-	74299060	74299060	8553170	2	615,121,	0,3814,
#Partially deleted in new
chr14	74299177	74302976	chr14:74299177-74302976	0	-	74299177	74299177	8553170	3	498,119,102,	0,972,3697,
#Partially deleted in new
chr14	74303068	74357033	chr14:74303068-74357033	0	+	74356783	74357033	789624	3	108,162,251,	0,34654,53714,
#Partially deleted in new
chr14	74305424	74306527	chr14:74305424-74306527	7	+	74305424	74305424	16724991	3	192,71,34,	0,565,1069,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	74348412	74360008	chr14:74348412-74360008	3	+	74356783	74358892	789624	2	240,3226,	0,8370,
#Partially deleted in new
chr14	74377817	74378418	chr14:74377817-74378418	7	-	74377817	74377817	16724991	1	601,	0,
#Partially deleted in new
chr14	74405892	74426102	chr14:74405892-74426102	3	-	74407534	74409744	789624	4	1801,141,474,191,	0,1956,3435,20019,
#Partially deleted in new
chr14	74405893	74409806	chr14:74405893-74409806	1	-	74407534	74409744	789624	3	1800,141,479,	0,1955,3434,
#Partially deleted in new
chr14	74409504	74426102	chr14:74409504-74426102	0	-	74409504	74409744	789624	2	297,191,	0,16407,
#Deleted in new
chr14	74471929	74472360	chr14:74471929-74472360	3	-	74471929	74471929	8553170	1	431,	0,
#Deleted in new
chr14	74474006	74474864	chr14:74474006-74474864	3	-	74474006	74474006	8553170	2	28,561,	0,297,
#Partially deleted in new
chr14	74476191	74493307	chr14:74476191-74493307	1	-	74476427	74493274	789624	5	401,78,173,108,115,	0,4510,8223,10137,17001,
#Partially deleted in new
chr14	74479222	74493281	chr14:74479222-74493281	3	-	74480273	74493274	0	4	1066,173,108,89,	0,5192,7106,13970,
#Partially deleted in new
chr14	74479932	74493512	chr14:74479932-74493512	1	-	74480273	74493274	0	5	356,78,173,108,320,	0,769,4482,6396,13260,
#Partially deleted in new
chr14	74479941	74493291	chr14:74479941-74493291	1	-	74480273	74493274	789624	5	347,69,173,108,99,	0,769,4473,6387,13251,
#Partially deleted in new
chr14	74479941	74493242	chr14:74479941-74493242	0	-	74480775	74493242	789624	4	347,78,108,50,	0,760,6387,13251,
#Partially deleted in new
chr14	74480081	74493339	chr14:74480081-74493339	0	-	74480081	74493274	789624	5	207,94,173,108,147,	0,604,4333,6247,13111,
#Partially deleted in new
chr14	74480095	74494177	chr14:74480095-74494177	0	-	74480273	74494177	789624	5	193,78,173,108,147,	0,606,4319,6233,13935,
#Deleted in new
chr14	74480132	74480204	chr14:74480132-74480204	3	-	74480132	74480132	5263520	1	72,	0,
#Partially deleted in new
chr14	74480186	74493347	chr14:74480186-74493347	1	-	74480617	74493274	789624	4	593,173,108,155,	0,4228,6142,13006,
#Deleted in new
chr14	74482984	74483435	chr14:74482984-74483435	7	+	74482984	74482984	16724991	1	451,	0,
#Partially deleted in new
chr14	74484410	74493608	chr14:74484410-74493608	0	-	74484410	74493274	789624	4	177,108,145,39,	0,1918,8782,9159,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	74493719	74497106	chr14:74493719-74497106	3	+	74493774	74495000	789624	4	126,103,116,2281,	0,330,555,1106,
#Deleted in new
chr14	74493755	74495366	chr14:74493755-74495366	1	+	74493774	74494861	789624	4	90,103,130,528,	0,294,519,1083,
#Deleted in new
chr14	74493764	74495130	chr14:74493764-74495130	1	+	74493774	74494834	789624	3	81,103,305,	0,285,1061,
#Deleted in new
chr14	74493771	74495022	chr14:74493771-74495022	0	+	74493771	74493771	8553170	3	74,103,748,	0,278,503,
#Partially deleted in new
chr14	74498169	74612331	chr14:74498169-74612331	3	-	74500883	74611944	789624	36	2860,150,282,168,138,129,84,192,144,126,132,123,126,123,126,126,123,120,120,129,129,102,40,20,216,165,123,75,103,287,207,171,191,265,71,881,	0,3271,4483,5049,5299,5756,6608,6813,7878,8528,9009,9803,10434,10660,11068,11564,11921,13075,18652,23741,24620,26954,27905,29177,30313,30788,34256,37756,51693,52894,54017,54722,57333,87684,105465,113281,
#Partially deleted in new
chr14	74500410	74612378	chr14:74500410-74612378	0	-	74501539	74611944	789624	36	619,150,371,168,138,129,84,192,144,126,132,123,126,123,126,126,123,120,120,129,129,102,40,20,216,165,123,75,103,287,207,171,191,265,71,928,	0,1030,2153,2808,3058,3515,4367,4572,5637,6287,6768,7562,8193,8419,8827,9323,9680,10834,16411,21500,22379,24713,25664,26936,28072,28547,32015,35515,49452,50653,51776,52481,55092,85443,103224,111040,
#Deleted in new
chr14	74500704	74501978	chr14:74500704-74501978	0	-	74500704	74500704	8553170	2	325,538,	0,736,
#Partially deleted in new
chr14	74500731	74612072	chr14:74500731-74612072	1	-	74500883	74611944	789624	35	298,150,282,168,138,129,84,192,144,126,123,126,123,126,126,123,120,120,129,129,102,40,20,216,165,123,75,103,287,207,171,191,265,71,622,	0,709,1921,2487,2737,3194,4046,4251,5316,5966,7241,7872,8098,8506,9002,9359,10513,16090,21179,22058,24392,25343,26615,27751,28226,31694,35194,49131,50332,51455,52160,54771,85122,102903,110719,
#Deleted in new
chr14	74506705	74509807	chr14:74506705-74509807	0	-	74506705	74509807	789624	6	118,132,126,123,126,74,	0,473,1898,2124,2532,3028,
#Partially deleted in new
chr14	74535931	74612168	chr14:74535931-74612168	0	-	74535931	74535931	8553170	4	69,103,287,123,	0,13931,15132,76114,
#Partially deleted in new
chr14	74552180	74560048	chr14:74552180-74560048	3	+	74552180	74552180	8553170	2	233,285,	0,7583,
#Deleted in new
chr14	74614692	74616612	chr14:74614692-74616612	3	-	74614692	74614692	8553170	2	642,25,	0,1895,
#Deleted in new
chr14	74614806	74616647	chr14:74614806-74616647	0	-	74614806	74614806	8553170	2	528,75,	0,1766,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	74653436	74664065	chr14:74653436-74664065	0	-	74663719	74664065	789624	6	62,59,94,49,311,167,	0,3442,3632,7455,10075,10462,
#Deleted in new
chr14	74658048	74658590	chr14:74658048-74658590	7	+	74658048	74658048	16724991	1	542,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr14	74660220	74713108	chr14:74660220-74713108	0	-	74660220	74660220	8553170	20	720,176,90,59,130,126,180,110,76,122,142,78,248,181,170,238,227,61,288,176,	0,3678,4615,7098,7244,9428,9726,10541,11187,12610,12856,13813,15478,15920,16362,23075,24233,25379,31820,52712,
#Partially deleted in new
chr14	74661251	74713115	chr14:74661251-74713115	3	-	74663719	74685615	789624	20	2571,176,90,59,130,126,180,110,76,122,142,78,248,181,170,238,227,61,288,183,	0,2647,3584,6067,6213,8397,8695,9510,10156,11579,11825,12782,14447,14889,15331,22044,23202,24348,30789,51681,
#Partially deleted in new
chr14	74661271	74685660	chr14:74661271-74685660	0	-	74670109	74685615	789624	17	2551,176,90,59,130,126,180,76,122,142,78,248,181,170,238,227,61,	0,2627,3564,6047,6193,8377,8675,10136,11559,11805,12762,14427,14869,15311,22024,23182,24328,
#Partially deleted in new
chr14	74663670	74664954	chr14:74663670-74664954	0	-	74663670	74663670	8553170	2	404,119,	0,1165,
#Partially deleted in new
chr14	74663813	74713087	chr14:74663813-74713087	0	-	74663813	74676750	789624	19	9,176,90,59,130,126,180,110,76,122,142,78,248,181,170,238,61,288,155,	0,85,1022,3505,3651,5835,6133,6948,7594,9017,9263,10220,11885,12327,12769,19482,21786,28227,49119,
#Partially deleted in new
chr14	74669686	74675708	chr14:74669686-74675708	0	-	74672014	74675708	789624	9	88,196,110,76,52,122,142,78,10,	0,260,1075,1721,2282,3144,3390,4347,6012,
#Partially deleted in new
chr14	74670070	74676024	chr14:74670070-74676024	0	-	74670070	74670070	8553170	7	56,110,76,122,142,78,326,	0,691,1337,2760,3006,3963,5628,
#Partially deleted in new
chr14	74670641	74713067	chr14:74670641-74713067	0	-	74670641	74670641	8553170	13	230,76,122,142,78,248,181,170,238,227,61,288,135,	0,766,2189,2435,3392,5057,5499,5941,12654,13812,14958,21399,42291,
#Partially deleted in new
chr14	74673183	74676215	chr14:74673183-74676215	0	-	74673183	74676215	789624	4	35,78,206,75,	0,850,2557,2957,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	74675787	74683395	chr14:74675787-74683395	0	-	74678183	74683395	789624	5	159,181,170,151,100,	0,353,795,2391,7508,
#Partially deleted in new
chr14	74675865	74685646	chr14:74675865-74685646	0	-	74676695	74685615	789624	5	81,181,170,227,47,	0,275,717,8588,9734,
#Partially deleted in new
chr14	74683388	74713080	chr14:74683388-74713080	0	-	74683388	74685615	789624	4	145,227,61,148,	0,1065,2211,29544,
#Partially deleted in new
chr14	74692015	74712943	chr14:74692015-74712943	0	-	74692015	74692015	8553170	2	313,90,	0,20838,
#Deleted in new
chr14	74711935	74712045	chr14:74711935-74712045	3	+	74711935	74711935	8553170	1	110,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	74713143	74738620	chr14:74713143-74738620	3	+	74713197	74734930	789624	8	57,68,72,149,73,88,95,3739,	0,341,1728,2807,10128,19587,20932,21738,
#Partially deleted in new
chr14	74713143	74732817	chr14:74713143-74732817	0	+	74716074	74732817	789624	6	57,136,72,149,73,87,	0,341,1728,2807,10128,19587,
#Partially deleted in new
chr14	74713167	74734917	chr14:74713167-74734917	0	+	74713197	74716048	789624	8	33,68,72,106,73,88,95,36,	0,317,1704,2826,10104,19563,20908,21714,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	74713169	74735040	chr14:74713169-74735040	1	+	74713517	74734930	789624	8	90,68,72,149,73,88,95,159,	0,315,1702,2781,10102,19561,20906,21712,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	74713169	74735304	chr14:74713169-74735304	1	+	74713197	74734930	789624	8	31,23,72,149,73,88,95,423,	0,315,1702,2781,10102,19561,20906,21712,
#Partially deleted in new
chr14	74713169	74732812	chr14:74713169-74732812	0	+	74713197	74715836	789624	6	31,68,72,279,73,82,	0,315,1702,2651,10102,19561,
#Partially deleted in new
chr14	74713203	74723343	chr14:74713203-74723343	0	+	74713517	74715836	789624	5	56,68,72,279,72,	0,281,1668,2617,10068,
#Partially deleted in new
chr14	74715671	74732793	chr14:74715671-74732793	0	+	74715671	74715671	8553170	3	428,73,63,	0,7600,17059,
#Partially deleted in new
chr14	74763365	74836281	chr14:74763365-74836281	3	+	74763489	74835411	789624	21	997,237,180,992,2118,121,418,93,196,119,155,63,120,177,84,84,81,52,131,183,507,	0,15081,17039,17968,34214,39190,46014,46544,46859,48254,49262,52837,53205,53565,53828,54865,57691,60890,65847,71899,72409,
#Partially deleted in new
chr14	74763365	74836190	chr14:74763365-74836190	1	+	74763489	74835411	789624	20	997,237,180,992,121,418,93,196,119,155,63,120,177,84,84,81,52,131,183,416,	0,15081,17039,17968,39190,46014,46544,46859,48254,49262,52837,53205,53565,53828,54865,57691,60890,65847,71899,72409,
#Partially deleted in new
chr14	74781384	74836190	chr14:74781384-74836190	0	+	74781384	74829230	789624	17	941,2118,121,418,93,196,119,155,63,120,177,84,84,81,131,183,416,	0,16195,21171,27995,28525,28840,30235,31243,34818,35186,35546,35809,36846,39672,47828,53880,54390,
#Partially deleted in new
chr14	74809631	74822115	chr14:74809631-74822115	0	+	74809631	74821200	789624	11	166,93,196,119,155,63,120,177,84,84,1059,	0,278,593,1988,2996,6571,6939,7299,7562,8599,11425,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	74817237	74859435	chr14:74817237-74859435	0	+	74817237	74855342	789624	4	40,84,81,4219,	0,993,3819,37979,
#Partially deleted in new
chr14	74818308	74828032	chr14:74818308-74828032	0	+	74818308	74818308	8553170	4	6,81,52,661,	0,2748,5947,9063,
#Deleted in new
chr14	74823977	74829289	chr14:74823977-74829289	0	+	74823977	74823977	8553170	2	330,77,	0,5235,
#Deleted in new
chr14	74834897	74837309	chr14:74834897-74837309	0	+	74834897	74834897	8553170	2	550,1535,	0,877,
#Partially deleted in new
chr14	74844023	74855675	chr14:74844023-74855675	0	+	74844023	74844023	8553170	2	237,459,	0,11193,
#Partially deleted in new
chr14	74852870	74863834	chr14:74852870-74863834	1	-	74855131	74863834	789624	3	2432,195,732,	0,3930,10232,
#Partially deleted in new
chr14	74853032	74863834	chr14:74853032-74863834	3	-	74855131	74863834	789624	4	2270,195,108,1305,	0,3768,5374,9497,
#Deleted in new
chr14	74873683	74874254	chr14:74873683-74874254	7	+	74873683	74873683	16724991	1	571,	0,
#Partially deleted in new
chr14	74881890	74892947	chr14:74881890-74892947	0	+	74881953	74891096	789624	7	126,34,49,53,75,112,114,	0,700,3695,7204,7384,9165,10943,
#Partially deleted in new
chr14	74881892	74903745	chr14:74881892-74903745	3	+	74881953	74902330	789624	15	124,34,49,53,75,56,112,153,77,98,131,74,84,168,1550,	0,698,3693,7202,7382,8004,9163,10941,11455,12419,16476,18030,18396,19173,20303,
#Partially deleted in new
chr14	74881902	74892943	chr14:74881902-74892943	0	+	74881953	74891092	789624	7	114,49,53,75,56,112,110,	0,3683,7192,7372,7994,9153,10931,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	74881913	74889733	chr14:74881913-74889733	0	+	74881913	74881913	8553170	5	103,34,49,53,459,	0,677,3672,7181,7361,
#Partially deleted in new
chr14	74881914	74902551	chr14:74881914-74902551	0	+	74881953	74889276	789624	12	102,49,75,112,153,77,98,131,74,84,168,356,	0,3671,7360,9141,10919,11433,12397,16454,18008,18374,19151,20281,
#Partially deleted in new
chr14	74881915	74902452	chr14:74881915-74902452	0	+	74881953	74889281	789624	14	101,34,49,53,73,112,153,77,98,131,74,84,168,257,	0,675,3670,7179,7361,9140,10918,11432,12396,16453,18007,18373,19150,20280,
#Partially deleted in new
chr14	74881915	74891289	chr14:74881915-74891289	0	+	74881915	74881915	8553170	6	101,49,53,75,56,234,	0,3670,7179,7359,7981,9140,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	74881921	74892058	chr14:74881921-74892058	0	+	74881921	74881921	8553170	7	95,34,49,53,75,56,1003,	0,669,3664,7173,7353,7975,9134,
#Partially deleted in new
chr14	74881924	74898455	chr14:74881924-74898455	0	+	74881924	74881924	8553170	9	92,53,75,56,112,153,77,98,87,	0,7170,7350,7972,9131,10909,11423,12387,16444,
#Partially deleted in new
chr14	74881924	74891350	chr14:74881924-74891350	0	+	74881924	74881924	8553170	5	92,49,75,56,295,	0,3661,7350,7972,9131,
#Partially deleted in new
chr14	74881924	74886024	chr14:74881924-74886024	0	+	74881924	74881924	8553170	3	92,34,439,	0,666,3661,
#Partially deleted in new
chr14	74881940	74901190	chr14:74881940-74901190	0	+	74881953	74891096	789624	12	76,34,53,73,100,153,77,98,131,74,84,125,	0,650,7154,7336,9127,10893,11407,12371,16428,17982,18348,19125,
#Partially deleted in new
chr14	74881953	74891096	chr14:74881953-74891096	1	+	74881953	74891096	789624	5	63,34,53,73,29,	0,637,7141,7323,9114,
#Partially deleted in new
chr14	74881955	74898486	chr14:74881955-74898486	0	+	74881955	74898486	789624	10	61,34,53,75,56,112,153,77,98,118,	0,635,7139,7319,7941,9100,10878,11392,12356,16413,
#Partially deleted in new
chr14	74885585	74894409	chr14:74885585-74894409	0	+	74885585	74889924	789624	8	49,53,75,75,138,153,77,98,	0,3509,3689,4292,5470,7248,7762,8726,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	74889068	74889669	chr14:74889068-74889669	0	+	74889068	74889068	8553170	2	79,395,	0,206,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	74903953	74922442	chr14:74903953-74922442	3	-	74907013	74921541	789624	11	3171,96,83,90,606,133,48,93,125,285,465,	0,3481,4896,5147,5589,7294,7840,14559,15891,17323,18024,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	74903953	74923243	chr14:74903953-74923243	0	-	74903953	74903953	8553170	9	3577,83,1048,133,48,93,125,285,64,	0,4896,5147,7294,7840,14559,15891,17323,19226,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	74905642	74922174	chr14:74905642-74922174	0	-	74906548	74921541	789624	12	510,177,107,96,83,90,606,133,48,125,285,197,	0,802,1375,1792,3207,3458,3900,5605,6151,14202,15634,16335,
#Partially deleted in new
chr14	74905642	74923302	chr14:74905642-74923302	1	-	74907013	74921541	789624	12	1482,96,83,90,606,133,48,93,125,285,145,123,	0,1792,3207,3458,3900,5605,6151,12870,14202,15634,16698,17537,
#Partially deleted in new
chr14	74905642	74907457	chr14:74905642-74907457	0	-	74906743	74907457	789624	3	1117,107,23,	0,1375,1792,
#Partially deleted in new
chr14	74905643	74910665	chr14:74905643-74910665	0	-	74905643	74905643	8553170	3	1887,83,1565,	0,3206,3457,
#Partially deleted in new
chr14	74905643	74909668	chr14:74905643-74909668	0	-	74908895	74909668	789624	4	1887,83,61,126,	0,3206,3457,3899,
#Partially deleted in new
chr14	74906637	74907530	chr14:74906637-74907530	0	-	74907392	74907530	789624	2	487,143,	0,750,
#Partially deleted in new
chr14	74906799	74911276	chr14:74906799-74911276	0	-	74907013	74911276	789624	4	325,83,90,29,	0,2050,2301,4448,
#Partially deleted in new
chr14	74906880	74911341	chr14:74906880-74911341	0	-	74907013	74911341	789624	5	244,96,83,90,94,	0,554,1969,2220,4367,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	74906983	74923396	chr14:74906983-74923396	1	-	74907013	74921541	789624	12	141,96,83,90,606,133,48,93,125,285,508,217,	0,451,1866,2117,2559,4264,4810,11529,12861,14293,14994,16196,
#Partially deleted in new
chr14	74909968	74918550	chr14:74909968-74918550	0	-	74909968	74909968	8553170	3	180,594,38,	0,1279,8544,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	74910889	74923255	chr14:74910889-74923255	0	-	74910889	74910889	8553170	7	491,48,93,125,285,508,76,	0,904,7623,8955,10387,11088,12290,
#Partially deleted in new
chr14	74911352	74922394	chr14:74911352-74922394	0	-	74911352	74911352	8553170	6	28,48,93,125,97,54,	0,441,7160,8492,9924,10988,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	74919871	74921773	chr14:74919871-74921773	0	-	74919871	74919871	8553170	2	98,497,	0,1405,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	74921515	74923251	chr14:74921515-74923251	0	-	74921515	74921541	789624	3	46,465,72,	0,462,1664,
#Partially deleted in new
chr14	74941833	74955784	chr14:74941833-74955784	3	-	74942705	74955242	0	7	900,63,30,77,197,43,617,	0,4379,4545,6673,7523,12070,13334,
#Partially deleted in new
chr14	74941840	74955626	chr14:74941840-74955626	1	-	74942705	74955242	0	6	893,30,77,197,43,459,	0,4538,6666,7516,12063,13327,
#Partially deleted in new
chr14	74941857	74955577	chr14:74941857-74955577	1	-	74942705	74955242	789624	7	876,63,30,77,197,40,410,	0,4355,4521,6649,7499,12046,13310,
#Partially deleted in new
chr14	74942493	74954234	chr14:74942493-74954234	0	-	74942493	74942493	8553170	5	240,30,77,197,331,	0,3885,6013,6863,11410,
#Partially deleted in new
chr14	74942705	74955242	chr14:74942705-74955242	1	-	74942705	74955242	0	7	28,30,216,77,197,43,75,	0,3673,4027,5801,6651,11198,12462,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	74944563	74948215	chr14:74944563-74948215	0	-	74944563	74944563	8553170	2	1712,1837,	0,1815,
#Partially deleted in new
chr14	74948128	74955597	chr14:74948128-74955597	0	-	74948128	74948128	8553170	4	455,197,43,430,	0,1228,5775,7039,
#Partially deleted in new
chr14	74948399	74955597	chr14:74948399-74955597	0	-	74948399	74948399	8553170	3	184,197,430,	0,957,6768,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	75002910	75012366	chr14:75002910-75012366	3	+	75002990	75009188	0	8	243,121,149,164,96,138,67,3336,	0,364,640,1826,2955,3666,4811,6120,
#Partially deleted in new
chr14	75002932	75005017	chr14:75002932-75005017	0	+	75002932	75002932	8553170	4	221,121,149,281,	0,342,618,1804,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	75002971	75005102	chr14:75002971-75005102	0	+	75002971	75002971	8553170	2	728,366,	0,1765,
#Partially deleted in new
chr14	75002973	75007735	chr14:75002973-75007735	0	+	75002990	75005920	789624	7	180,121,149,164,65,138,14,	0,301,577,1763,2923,3603,4748,
#Partially deleted in new
chr14	75003017	75007788	chr14:75003017-75007788	0	+	75003017	75005873	789624	7	136,121,149,164,121,138,67,	0,257,533,1719,2823,3559,4704,
#Partially deleted in new
chr14	75004718	75008481	chr14:75004718-75008481	3	-	75004718	75004718	8553170	2	203,286,	0,3477,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	75005904	75007416	chr14:75005904-75007416	0	+	75005904	75007081	789624	3	57,138,356,	0,672,1156,
#Partially deleted in new
chr14	75006303	75009563	chr14:75006303-75009563	0	+	75006303	75006303	8553170	3	411,67,533,	0,1418,2727,
#Deleted in new
chr14	75011268	75012851	chr14:75011268-75012851	3	-	75011268	75011268	8553170	1	1583,	0,
#Partially deleted in new
chr14	75013763	75051532	chr14:75013763-75051532	3	-	75017081	75049655	789624	13	3438,152,79,24,160,112,72,73,105,86,99,3343,153,	0,5065,9050,9231,16779,18304,19655,24576,26147,27851,28615,32612,37616,
#Partially deleted in new
chr14	75013768	75051532	chr14:75013768-75051532	1	-	75017081	75049655	789624	12	3433,152,79,24,160,112,73,105,86,99,3343,153,	0,5060,9045,9226,16774,18299,24571,26142,27846,28610,32607,37611,
#Partially deleted in new
chr14	75015486	75023018	chr14:75015486-75023018	0	-	75017081	75023018	789624	5	376,194,152,79,24,	0,1521,3342,7327,7508,
#Partially deleted in new
chr14	75016396	75046825	chr14:75016396-75046825	0	-	75017081	75046825	789624	11	805,152,79,24,160,112,72,73,105,86,450,	0,2432,6417,6598,14146,15671,17022,21943,23514,25218,29979,
#Partially deleted in new
chr14	75016785	75019112	chr14:75016785-75019112	0	-	75016785	75016785	8553170	2	416,284,	0,2043,
#Partially deleted in new
chr14	75016786	75051457	chr14:75016786-75051457	1	-	75017081	75049655	789624	7	415,152,79,24,173,3343,43,	0,2042,6027,6208,13756,29589,34628,
#Partially deleted in new
chr14	75016988	75049691	chr14:75016988-75049691	1	-	75017081	75049655	789624	12	213,152,79,24,160,112,72,73,105,86,99,3316,	0,1840,5825,6006,13554,15079,16430,21351,22922,24626,25390,29387,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	75020760	75020867	chr14:75020760-75020867	3	+	75020760	75020760	8553170	1	107,	0,
#Partially deleted in new
chr14	75022813	75046444	chr14:75022813-75046444	0	-	75032116	75046444	789624	7	79,24,160,112,105,86,69,	0,181,7729,9254,17097,18801,23562,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	75022814	75046641	chr14:75022814-75046641	0	-	75036668	75046641	789624	10	78,24,160,112,72,150,73,86,99,266,	0,180,7728,9253,10604,13778,15525,18800,19564,23561,
#Partially deleted in new
chr14	75030557	75046388	chr14:75030557-75046388	0	-	75030557	75030557	8553170	6	145,112,72,86,99,13,	0,1510,2861,11057,11821,15818,
#Partially deleted in new
chr14	75039910	75047201	chr14:75039910-75047201	0	-	75039910	75039910	8553170	2	105,826,	0,6465,
#Partially deleted in new
chr14	75049168	75051504	chr14:75049168-75051504	0	-	75049168	75049655	789624	2	550,66,	0,2270,
#Partially deleted in new
chr14	75049336	75051467	chr14:75049336-75051467	0	-	75049336	75049655	789624	3	382,172,29,	0,1515,2102,
#Partially deleted in new
chr14	75053220	75064049	chr14:75053220-75064049	3	-	75053443	75063553	0	3	439,92,96,	0,10249,10733,
#Partially deleted in new
chr14	75053236	75069483	chr14:75053236-75069483	1	-	75053443	75069291	789624	3	423,92,274,	0,10233,15973,
#Partially deleted in new
chr14	75053242	75064015	chr14:75053242-75064015	1	-	75053654	75063553	0	4	417,79,92,62,	0,8441,10227,10711,
#Partially deleted in new
chr14	75053242	75064027	chr14:75053242-75064027	1	-	75053443	75063553	0	3	417,92,56,	0,10227,10729,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	75059847	75064007	chr14:75059847-75064007	1	-	75060235	75063553	789624	4	414,79,92,54,	0,1836,3622,4106,
#Partially deleted in new
chr14	75063022	75064020	chr14:75063022-75064020	1	-	75063439	75063553	789624	2	539,67,	0,931,
#Partially deleted in new
chr14	75064169	75070853	chr14:75064169-75070853	0	+	75070573	75070853	789624	2	265,299,	0,6385,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	75069279	75079987	chr14:75069279-75079987	3	+	75070573	75077564	789624	3	470,1357,2456,	0,1275,8252,
#Partially deleted in new
chr14	75069576	75078423	chr14:75069576-75078423	1	+	75070573	75077536	789624	3	173,1184,892,	0,978,7955,
#Partially deleted in new
chr14	75069640	75078089	chr14:75069640-75078089	1	+	75070573	75077536	789624	3	109,842,558,	0,914,7891,
#Partially deleted in new
chr14	75069640	75071056	chr14:75069640-75071056	0	+	75070573	75071056	789624	2	45,502,	0,914,
#Partially deleted in new
chr14	75069672	75071087	chr14:75069672-75071087	0	+	75070573	75071087	789624	2	276,533,	0,882,
#Partially deleted in new
chr14	75069673	75078091	chr14:75069673-75078091	0	+	75069673	75069673	8553170	2	76,560,	0,7858,
#Partially deleted in new
chr14	75069676	75070849	chr14:75069676-75070849	0	+	75070573	75070849	789624	2	249,295,	0,878,
#Partially deleted in new
chr14	75070973	75077819	chr14:75070973-75077819	0	+	75070973	75073620	789624	3	423,65,288,	0,2597,6558,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr14	75079352	75127080	chr14:75079352-75127080	3	-	75084563	75126921	0	22	5334,213,162,209,60,171,162,109,156,47,201,145,193,51,65,111,132,106,71,56,178,378,	0,7665,9127,11917,16019,17747,21639,22304,24489,26597,27149,27990,30332,30968,33986,34850,37842,39477,41157,41766,44693,47350,
#Partially deleted in new
chr14	75082120	75091685	chr14:75082120-75091685	0	-	75082120	75082120	8553170	4	2566,213,162,416,	0,4897,6359,9149,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr14	75082120	75117245	chr14:75082120-75117245	0	-	75082120	75082120	8553170	16	2566,213,162,209,60,171,162,109,156,753,145,193,51,65,111,51,	0,4897,6359,9149,13251,14979,18871,19536,21721,23829,25222,27564,28200,31218,32082,35074,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	75084086	75085095	chr14:75084086-75085095	0	-	75084086	75084086	8553170	2	600,237,	0,772,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr14	75086428	75127045	chr14:75086428-75127045	0	-	75086428	75086428	8553170	19	802,162,209,171,162,109,156,753,145,193,51,65,111,132,106,71,56,178,343,	0,2051,4841,10671,14563,15228,17413,19521,20914,23256,23892,26910,27774,30766,32401,34081,34690,37617,40274,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	75096669	75101065	chr14:75096669-75101065	0	-	75096669	75096669	8553170	2	601,74,	0,4322,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	75116425	75116600	chr14:75116425-75116600	7	-	75116425	75116425	16724991	1	175,	0,
#Partially deleted in new
chr14	75117212	75126933	chr14:75117212-75126933	0	-	75120540	75126921	789624	5	114,106,71,56,231,	0,1617,3297,3906,9490,
#Partially deleted in new
chr14	75117216	75127040	chr14:75117216-75127040	0	-	75117216	75124088	789624	6	110,106,71,56,178,136,	0,1613,3293,3902,6829,9688,
#Partially deleted in new
chr14	75118868	75120730	chr14:75118868-75120730	0	-	75118868	75118868	8553170	2	67,221,	0,1641,
#Partially deleted in new
chr14	75118886	75127344	chr14:75118886-75127344	0	-	75118886	75124088	789624	5	49,71,56,178,223,	0,1623,2232,5159,8235,
#Partially deleted in new
chr14	75120515	75127053	chr14:75120515-75127053	0	-	75120989	75124088	789624	5	65,136,56,178,351,	0,356,603,3530,6187,
#Partially deleted in new
chr14	75127152	75136930	chr14:75127152-75136930	3	+	75127152	75127152	8553170	2	208,159,	0,9619,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	75131469	75176631	chr14:75131469-75176631	3	-	75134884	75176579	789624	5	3537,127,74,112,277,	0,4290,16194,20562,44885,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	75133937	75147781	chr14:75133937-75147781	0	-	75133937	75133937	8553170	3	1069,127,118,	0,1822,13726,
#Partially deleted in new
chr14	75134355	75147897	chr14:75134355-75147897	0	-	75134355	75134355	8553170	4	651,127,74,65,	0,1404,13308,13477,
#Partially deleted in new
chr14	75134439	75147760	chr14:75134439-75147760	0	-	75134439	75134439	8553170	3	567,224,97,	0,1223,13224,
#Partially deleted in new
chr14	75134499	75176597	chr14:75134499-75176597	0	-	75139120	75176579	789624	6	507,127,98,74,112,243,	0,1260,4574,13164,17532,41855,
#Partially deleted in new
chr14	75147554	75176612	chr14:75147554-75176612	0	-	75147554	75147554	8553170	3	183,112,258,	0,4477,28800,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	75175920	75176532	chr14:75175920-75176532	0	-	75175920	75175920	8553170	1	612,	0,
#Deleted in new
chr14	75176928	75177418	chr14:75176928-75177418	3	+	75176928	75176928	8553170	1	490,	0,
#Partially deleted in new
chr14	75202080	75202169	chr14:75202080-75202169	3	-	75202080	75202080	8553170	1	89,	0,
#Partially deleted in new
chr14	75238615	75269283	chr14:75238615-75269283	3	-	75238615	75238615	8553170	2	574,104,	0,30564,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	75259410	75271861	chr14:75259410-75271861	3	+	75259410	75259410	8553170	5	95,97,113,175,224,	0,530,1346,9675,12227,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	75267478	75271950	chr14:75267478-75271950	0	+	75267478	75267478	8553170	3	81,175,313,	0,1607,4159,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	75270699	75270780	chr14:75270699-75270780	3	-	75270699	75270699	8553170	1	81,	0,
#Deleted in new
chr14	75278773	75282230	chr14:75278773-75282230	3	+	75278982	75281424	0	4	350,252,108,1448,	0,1103,1786,2009,
#Deleted in new
chr14	75278825	75280374	chr14:75278825-75280374	1	+	75278982	75280248	789624	2	298,498,	0,1051,
#Deleted in new
chr14	75278827	75281636	chr14:75278827-75281636	1	+	75278982	75281424	0	3	296,252,854,	0,1049,1955,
#Deleted in new
chr14	75278827	75280607	chr14:75278827-75280607	0	+	75278982	75280607	789624	3	296,223,48,	0,1078,1732,
#Deleted in new
chr14	75278827	75279531	chr14:75278827-75279531	0	+	75278827	75278827	8553170	2	301,295,	0,409,
#Deleted in new
chr14	75278976	75280789	chr14:75278976-75280789	1	+	75278982	75280697	789624	3	147,252,230,	0,900,1583,
#Deleted in new
chr14	75279642	75281684	chr14:75279642-75281684	1	+	75280077	75281424	0	3	486,108,902,	0,917,1140,
#Deleted in new
chr14	75279669	75281157	chr14:75279669-75281157	0	+	75280077	75281157	789624	2	459,375,	0,1113,
#Deleted in new
chr14	75279977	75280667	chr14:75279977-75280667	0	+	75279977	75280667	789624	2	151,98,	0,592,
#Deleted in new
chr14	75280192	75281587	chr14:75280192-75281587	1	+	75280610	75281424	789624	2	475,805,	0,590,
#Deleted in new
chr14	75292130	75292495	chr14:75292130-75292495	7	-	75292130	75292130	16724991	1	365,	0,
#Deleted in new
chr14	75294403	75296140	chr14:75294403-75296140	0	+	75294403	75294403	8553170	2	138,21,	0,1716,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	75294406	75296638	chr14:75294406-75296638	3	+	75294406	75294406	789624	3	135,61,519,	0,270,1713,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	75423682	75427741	chr14:75423682-75427741	3	-	75423682	75423682	8553170	1	4059,	0,
#Deleted in new
chr14	75426333	75427690	chr14:75426333-75427690	1	-	75426333	75426333	8553170	2	378,221,	0,1136,
#Partially deleted in new
chr14	75427715	75469798	chr14:75427715-75469798	1	+	75437920	75469475	789624	4	134,224,105,509,	0,10182,33710,41574,
#Partially deleted in new
chr14	75427805	75445379	chr14:75427805-75445379	0	+	75427805	75427805	8553170	3	44,224,290,	0,10092,17284,
#Partially deleted in new
chr14	75428045	75469384	chr14:75428045-75469384	0	+	75437920	75469384	789624	4	207,224,105,95,	0,9852,33380,41244,
#Partially deleted in new
chr14	75428095	75445162	chr14:75428095-75445162	0	+	75428095	75428095	8553170	3	157,224,73,	0,9802,16994,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	75428216	75472699	chr14:75428216-75472699	1	+	75437920	75469475	789624	4	36,224,105,3410,	0,9681,33209,41073,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	75428356	75474111	chr14:75428356-75474111	3	+	75437920	75469475	789624	4	250,224,105,4822,	0,9541,33069,40933,
#Partially deleted in new
chr14	75432133	75470457	chr14:75432133-75470457	1	+	75432326	75469475	789624	4	203,224,105,1168,	0,5764,29292,37156,
#Partially deleted in new
chr14	75522424	75547015	chr14:75522424-75547015	3	+	75522682	75546671	789624	3	321,105,554,	0,2659,24037,
#Partially deleted in new
chr14	75522454	75546887	chr14:75522454-75546887	0	+	75522454	75522454	8553170	3	86,105,426,	0,2629,24007,
#Partially deleted in new
chr14	75522559	75546993	chr14:75522559-75546993	1	+	75522682	75546977	789624	3	186,87,88,	0,2524,24346,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	75574887	75579588	chr14:75574887-75579588	3	-	75574887	75574887	789624	3	206,141,1812,	0,1517,2889,
#Partially deleted in new
chr14	75578616	75648167	chr14:75578616-75648167	3	+	75578972	75646472	789624	10	1025,142,141,68,104,111,106,112,56,1767,	0,43462,45995,55012,56293,60735,62338,62565,63226,67784,
#Partially deleted in new
chr14	75579455	75646655	chr14:75579455-75646655	0	+	75579455	75579455	8553170	2	186,255,	0,66945,
#Partially deleted in new
chr14	75579583	75663214	chr14:75579583-75663214	0	+	75579583	75579583	8553170	2	58,160,	0,83471,
#Deleted in new
chr14	75595804	75596206	chr14:75595804-75596206	7	-	75595804	75595804	16724991	1	402,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	75604172	75604278	chr14:75604172-75604278	7	+	75604172	75604172	16724991	1	106,	0,
#Partially deleted in new
chr14	75605461	75646618	chr14:75605461-75646618	1	+	75605570	75646472	789624	10	163,142,141,68,104,111,106,112,56,218,	0,16617,19150,28167,29448,33890,35493,35720,36381,40939,
#Partially deleted in new
chr14	75605814	75633697	chr14:75605814-75633697	0	+	75622165	75633697	789624	4	180,142,141,69,	0,16264,18797,27814,
#Partially deleted in new
chr14	75622057	75641897	chr14:75622057-75641897	0	+	75622165	75641897	789624	7	163,68,104,111,106,112,55,	0,11571,12852,17294,18897,19124,19785,
#Partially deleted in new
chr14	75622057	75663164	chr14:75622057-75663164	0	+	75622057	75622057	8553170	4	163,141,104,110,	0,2554,12852,40997,
#Partially deleted in new
chr14	75622059	75663164	chr14:75622059-75663164	1	+	75622165	75663088	789624	5	161,141,68,104,110,	0,2552,11569,12850,40995,
#Partially deleted in new
chr14	75622091	75647150	chr14:75622091-75647150	1	+	75622165	75646486	789624	3	129,141,750,	0,2520,24309,
#Partially deleted in new
chr14	75631713	75641898	chr14:75631713-75641898	0	+	75631773	75641898	789624	7	112,68,104,111,106,112,56,	0,1915,3196,7638,9241,9468,10129,
#Partially deleted in new
chr14	75632609	75646633	chr14:75632609-75646633	1	+	75632660	75646472	789624	9	77,71,68,104,111,106,112,56,233,	0,272,1019,2300,6742,8345,8572,9233,13791,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	75632626	75639462	chr14:75632626-75639462	0	+	75632626	75632626	8553170	4	326,68,104,111,	0,1002,2283,6725,
#Partially deleted in new
chr14	75633624	75663164	chr14:75633624-75663164	0	+	75633624	75633624	8553170	2	72,110,	0,29430,
#Partially deleted in new
chr14	75633624	75663164	chr14:75633624-75663164	0	+	75633624	75633624	8553170	3	72,104,110,	0,1285,29430,
#Partially deleted in new
chr14	75640731	75641976	chr14:75640731-75641976	0	+	75640731	75640731	8553170	3	329,112,134,	0,450,1111,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	75649790	75661189	chr14:75649790-75661189	3	-	75651554	75657502	789624	5	1844,119,91,164,415,	0,1980,5095,7579,10984,
#Partially deleted in new
chr14	75660991	75690282	chr14:75660991-75690282	0	+	75660991	75660991	8553170	6	35,169,107,83,107,91,	0,2063,8424,20553,22558,29200,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	75661223	75684987	chr14:75661223-75684987	1	+	75663149	75683660	789624	5	164,169,107,83,1438,	0,1831,8192,20321,22326,
#Partially deleted in new
chr14	75661232	75669530	chr14:75661232-75669530	0	+	75661232	75661232	8553170	3	405,169,115,	0,1822,8183,
#Partially deleted in new
chr14	75661267	75886867	chr14:75661267-75886867	1	+	75663149	75886760	789624	32	120,169,107,83,107,131,83,70,85,102,92,108,82,62,95,42,114,92,63,158,307,121,147,104,128,87,384,188,155,196,218,168,	0,1787,8148,20277,22282,28924,37920,45750,46355,56593,58467,59328,71070,72721,73927,76298,83827,84222,91625,103347,104794,110466,114216,115479,118307,121219,121879,131645,158739,202399,221417,225432,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	75661277	75709828	chr14:75661277-75709828	1	+	75663149	75709248	789624	10	110,169,107,83,107,131,83,70,85,650,	0,1777,8138,20267,22272,28914,37910,45740,46345,47901,
#Partially deleted in new
chr14	75661277	75955078	chr14:75661277-75955078	3	+	75663149	75954446	789624	32	110,169,107,83,107,131,83,70,85,102,92,108,82,62,95,114,92,63,158,307,121,147,104,128,87,384,185,155,196,218,83,655,	0,1777,8138,20267,22272,28914,37910,45740,46345,56583,58457,59318,71060,72711,73917,83817,84212,91615,103337,104784,110456,114206,115469,118297,121209,121869,131638,158729,202389,221407,240864,293146,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	75669415	75712501	chr14:75669415-75712501	0	+	75669415	75669415	8553170	8	107,83,107,131,83,70,85,3323,	0,12129,14134,20776,29772,37602,38207,39763,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	75689420	75690322	chr14:75689420-75690322	0	+	75689420	75689420	8553170	2	441,131,	0,771,
#Partially deleted in new
chr14	75699216	75783355	chr14:75699216-75783355	0	+	75699216	75699216	8553170	19	54,70,85,61,78,82,62,95,114,92,63,158,307,121,147,146,124,87,209,	0,7801,8406,9962,32939,33121,34772,35978,45878,46273,53676,65398,66845,72517,76267,77488,80362,83270,83930,
#Partially deleted in new
chr14	75717811	75735227	chr14:75717811-75735227	0	+	75717811	75717811	8553170	6	151,92,108,82,62,33,	0,1923,2784,14526,16177,17383,
#Partially deleted in new
chr14	75719778	75752954	chr14:75719778-75752954	0	+	75719778	75719778	8553170	9	48,108,82,62,95,42,114,92,62,	0,817,12559,14210,15416,17787,25316,25711,33114,
#Partially deleted in new
chr14	75735194	75744726	chr14:75735194-75744726	0	+	75735194	75735194	8553170	2	95,350,	0,9182,
#Partially deleted in new
chr14	75745118	75766132	chr14:75745118-75766132	0	+	75745118	75745118	8553170	6	90,92,63,39,158,71,	0,371,7774,12712,19496,20943,
#Partially deleted in new
chr14	75745129	75887307	chr14:75745129-75887307	1	+	75745199	75886760	789624	17	79,92,63,39,158,307,121,147,104,128,87,384,185,155,196,218,608,	0,360,7763,12701,19485,20932,26604,30354,31617,34445,37357,38017,47786,74877,118537,137555,141570,
#Partially deleted in new
chr14	75745487	75886937	chr14:75745487-75886937	1	+	75752917	75886760	789624	16	94,63,39,158,307,121,147,104,128,87,384,185,155,196,218,238,	0,7405,12343,19127,20574,26246,29996,31259,34087,36999,37659,47428,74519,118179,137197,141212,
#Partially deleted in new
chr14	75793082	75820768	chr14:75793082-75820768	0	+	75793082	75820612	789624	3	18,155,166,	0,26924,27520,
#Partially deleted in new
chr14	75803143	75820768	chr14:75803143-75820768	0	+	75803143	75803143	8553170	3	110,155,166,	0,16863,17459,
#Partially deleted in new
chr14	75834683	75836365	chr14:75834683-75836365	1	-	75834683	75834683	8553170	2	39,1168,	0,514,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	75838156	75839114	chr14:75838156-75839114	7	-	75838156	75838156	16724991	1	958,	0,
#Partially deleted in new
chr14	75882718	75902504	chr14:75882718-75902504	0	+	75882718	75882718	8553170	2	184,363,	0,19423,
#Partially deleted in new
chr14	75882794	75954828	chr14:75882794-75954828	0	+	75882794	75882794	8553170	4	108,83,123,405,	0,19347,23760,71629,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	75902135	76022631	chr14:75902135-76022631	0	+	75902135	75902135	8553170	3	89,93,305,	0,86749,120191,
#Partially deleted in new
chr14	75902139	75954823	chr14:75902139-75954823	0	+	75902139	75902139	8553170	3	85,71,400,	0,39284,52284,
#Partially deleted in new
chr14	75958098	75966722	chr14:75958098-75966722	0	-	75958098	75958098	8553170	4	1247,154,172,1135,	0,2824,5217,7489,
#Partially deleted in new
chr14	75958201	75981191	chr14:75958201-75981191	3	-	75959186	75980893	0	7	1144,154,172,108,130,164,650,	0,2721,5114,7386,12924,13353,22340,
#Partially deleted in new
chr14	75959288	75960957	chr14:75959288-75960957	0	-	75959288	75959288	8553170	3	57,118,35,	0,980,1634,
#Partially deleted in new
chr14	75960860	75970790	chr14:75960860-75970790	0	-	75960860	75960860	8553170	4	216,172,108,112,	0,2455,4727,9818,
#Partially deleted in new
chr14	75963061	75980993	chr14:75963061-75980993	1	-	75963311	75980893	0	5	426,108,130,164,452,	0,2526,8064,8493,17480,
#Deleted in new
chr14	75970923	75971587	chr14:75970923-75971587	3	+	75970923	75970923	8553170	2	408,172,	0,492,
#Deleted in new
chr14	75980575	75982836	chr14:75980575-75982836	0	-	75980575	75980575	8553170	2	505,44,	0,2217,
#Deleted in new
chr14	75981242	75982991	chr14:75981242-75982991	0	-	75981242	75981242	8553170	2	517,199,	0,1550,
#Partially deleted in new
chr14	75985752	76083749	chr14:75985752-76083749	3	+	75985786	76083577	789624	9	88,93,68,33,47,73,76,63,292,	0,3132,36574,72889,73574,96542,96864,97474,97705,
#Partially deleted in new
chr14	75985769	76084073	chr14:75985769-76084073	0	+	75985786	76083577	789624	10	71,93,68,33,47,73,76,63,179,311,	0,3115,36557,72872,73557,96525,96847,97457,97688,97993,
#Partially deleted in new
chr14	75985779	76083701	chr14:75985779-76083701	0	+	75985779	75985779	8553170	9	61,93,68,33,47,95,398,63,244,	0,3105,36547,72862,73547,90817,96515,97447,97678,
#Partially deleted in new
chr14	75985779	76084585	chr14:75985779-76084585	0	+	75985779	75985779	8553170	9	61,93,68,33,47,398,63,179,823,	0,3105,36547,72862,73547,96515,97447,97678,97983,
#Partially deleted in new
chr14	75985781	76083746	chr14:75985781-76083746	1	+	75985786	76083577	789624	8	59,93,68,95,73,76,63,289,	0,3103,36545,90815,96513,96835,97445,97676,
#Partially deleted in new
chr14	75985781	76059376	chr14:75985781-76059376	0	+	75985786	75986170	789624	6	59,157,93,68,33,50,	0,344,3103,36545,72860,73545,
#Partially deleted in new
chr14	75985783	76059271	chr14:75985783-76059271	1	+	75985786	76058768	789624	4	57,93,68,630,	0,3101,36543,72858,
#Partially deleted in new
chr14	75985793	76022402	chr14:75985793-76022402	0	+	75985793	75985793	8553170	3	515,93,76,	0,3091,36533,
#Deleted in new
chr14	76013678	76014143	chr14:76013678-76014143	7	+	76013678	76013678	16724991	1	465,	0,
#Partially deleted in new
chr14	76022324	76082625	chr14:76022324-76082625	0	+	76022324	76022324	8553170	3	70,71,331,	0,15754,59970,
#Deleted in new
chr14	76058170	76059348	chr14:76058170-76059348	0	+	76058170	76058170	8553170	2	504,22,	0,1156,
#Deleted in new
chr14	76058323	76059610	chr14:76058323-76059610	0	+	76058323	76058323	8553170	2	351,284,	0,1003,
#Partially deleted in new
chr14	76131706	76152627	chr14:76131706-76152627	3	-	76131706	76131706	8553170	2	411,106,	0,20815,
#Partially deleted in new
chr14	76151915	76202007	chr14:76151915-76202007	0	+	76154363	76178213	789624	11	76,672,65,177,80,68,40,115,86,95,317,	0,2438,14747,19927,21630,24707,25976,26292,28848,43962,49775,
#Deleted in new
chr14	76151918	76154978	chr14:76151918-76154978	0	+	76154363	76154978	789624	3	73,403,99,	0,2435,2961,
#Deleted in new
chr14	76151918	76154681	chr14:76151918-76154681	0	+	76154363	76154681	789624	3	73,45,328,	0,617,2435,
#Partially deleted in new
chr14	76151921	76174035	chr14:76151921-76174035	1	+	76154363	76173697	789624	5	54,672,65,177,490,	0,2432,14741,19921,21624,
#Deleted in new
chr14	76151929	76153002	chr14:76151929-76153002	0	+	76151929	76151929	8553170	2	62,467,	0,606,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	76151933	76180022	chr14:76151933-76180022	0	+	76151933	76151933	8553170	6	58,672,65,177,3145,2131,	0,2420,14729,19909,21612,25958,
#Partially deleted in new
chr14	76151934	76202788	chr14:76151934-76202788	1	+	76154363	76201851	789624	10	57,672,65,177,80,68,40,86,95,1098,	0,2419,14728,19908,21611,24688,25957,28829,43943,49756,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	76151935	76214343	chr14:76151935-76214343	3	+	76154363	76201851	789624	10	56,672,65,177,80,68,55,86,95,12653,	0,2418,14727,19907,21610,24687,26052,28828,43942,49755,
#Partially deleted in new
chr14	76153645	76174035	chr14:76153645-76174035	1	+	76154363	76173697	789624	4	1380,65,177,490,	0,13017,18197,19900,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	76154353	76212803	chr14:76154353-76212803	1	+	76154363	76201851	789624	9	672,65,177,80,68,40,86,95,11113,	0,12309,17489,19192,22269,23538,26410,41524,47337,
#Partially deleted in new
chr14	76170595	76195987	chr14:76170595-76195987	0	+	76180794	76195987	789624	8	130,177,80,68,55,115,86,110,	0,1247,2950,6027,7392,7612,10168,25282,
#Partially deleted in new
chr14	76180781	76196585	chr14:76180781-76196585	1	+	76180794	76196125	789624	2	68,708,	0,15096,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	76180814	76234926	chr14:76180814-76234926	0	+	76180814	76180814	8553170	5	35,95,146,91,404,	0,15063,48993,49514,53708,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	76195907	76254342	chr14:76195907-76254342	0	+	76195907	76229836	789624	4	65,146,58,270,	0,33900,56143,58165,
#Partially deleted in new
chr14	76235816	76263474	chr14:76235816-76263474	3	+	76235816	76235816	8553170	3	187,58,275,	0,16234,27383,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	76279172	76283103	chr14:76279172-76283103	3	+	76279172	76279172	8553170	1	3931,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	76280942	76310066	chr14:76280942-76310066	3	-	76280942	76280942	8553170	3	211,67,242,	0,14971,28882,
#Partially deleted in new
chr14	76310711	76498475	chr14:76310711-76498475	1	+	76310914	76498458	789624	7	205,410,117,111,162,270,262,	0,128629,151833,171304,171886,180735,187502,
#Partially deleted in new
chr14	76371346	76501837	chr14:76371346-76501837	1	+	76439353	76500721	789624	11	240,64,54,410,117,111,162,270,239,204,1143,	0,33049,36196,67994,91198,110669,111251,120100,126867,128516,129348,
#Partially deleted in new
chr14	76371380	76500865	chr14:76371380-76500865	0	+	76439353	76499882	789624	12	206,64,54,410,117,111,162,270,239,187,204,171,	0,33015,36162,67960,91164,110635,111217,120066,126833,127345,128482,129314,
#Partially deleted in new
chr14	76376136	76501837	chr14:76376136-76501837	3	+	76376401	76498458	789624	7	315,410,117,111,162,270,3624,	0,63204,86408,105879,106461,115310,122077,
#Partially deleted in new
chr14	76407401	76501835	chr14:76407401-76501835	1	+	76439353	76500721	789624	9	195,410,117,111,162,270,239,204,1141,	0,31939,55143,74614,75196,84045,90812,92461,93293,
#Partially deleted in new
chr14	76407537	76498511	chr14:76407537-76498511	0	+	76407537	76407537	8553170	7	59,410,117,111,162,270,298,	0,31803,55007,74478,75060,83909,90676,
#Partially deleted in new
chr14	76439641	76463427	chr14:76439641-76463427	0	+	76439641	76463284	789624	3	109,117,217,	0,22903,23569,
#Deleted in new
chr14	76499645	76501835	chr14:76499645-76501835	0	+	76499645	76499645	8553170	1	2190,	0,
#Partially deleted in new
chr14	76633713	76634028	chr14:76633713-76634028	7	+	76633713	76633713	16724991	1	315,	0,
#Partially deleted in new
chr14	76634774	76635661	chr14:76634774-76635661	7	-	76634774	76634774	16724991	1	887,	0,
#Deleted in new
chr14	76690138	76690742	chr14:76690138-76690742	7	-	76690138	76690138	16724991	1	604,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	76710657	76761388	chr14:76710657-76761388	3	-	76710657	76710657	8553170	3	158,179,203,	0,1025,50528,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	76762188	76783015	chr14:76762188-76783015	3	+	76762821	76779018	789624	7	942,89,57,75,382,113,4070,	0,7774,9001,10948,13703,15770,16757,
#Partially deleted in new
chr14	76762328	76773650	chr14:76762328-76773650	1	+	76762821	76773296	789624	4	802,89,57,514,	0,7634,8861,10808,
#Partially deleted in new
chr14	76769880	76777999	chr14:76769880-76777999	0	+	76769880	76769880	8553170	5	171,57,75,382,41,	0,1309,3256,6011,8078,
#Partially deleted in new
chr14	76769952	76773913	chr14:76769952-76773913	0	+	76769952	76769952	8553170	4	99,57,75,253,	0,1237,3184,3708,
#Partially deleted in new
chr14	76774283	76781518	chr14:76774283-76781518	3	-	76774283	76774283	8553170	2	630,119,	0,7116,
#Deleted in new
chr14	76778005	76779975	chr14:76778005-76779975	1	+	76779334	76779610	789624	2	66,1030,	0,940,
#Partially deleted in new
chr14	76778951	76782249	chr14:76778951-76782249	3	+	76778951	76778951	8553170	2	48,673,	0,2625,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	76780707	76781456	chr14:76780707-76781456	1	-	76780707	76780707	8553170	2	205,57,	0,692,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	76781732	76786724	chr14:76781732-76786724	3	-	76781732	76781732	789624	2	1044,640,	0,4352,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	76782134	76786154	chr14:76782134-76786154	1	-	76782134	76782134	8553170	3	642,159,70,	0,1558,3950,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	76786177	76812940	chr14:76786177-76812940	3	-	76789227	76812827	789624	10	3211,164,70,111,127,434,70,227,585,177,	0,4433,5119,17193,17608,20238,21255,21744,22881,26586,
#Partially deleted in new
chr14	76788956	76804435	chr14:76788956-76804435	1	-	76789227	76803987	789624	5	432,164,70,111,650,	0,1654,2340,14414,14829,
#Partially deleted in new
chr14	76790670	76806515	chr14:76790670-76806515	0	-	76790670	76803398	789624	6	104,70,111,127,41,100,	0,626,12700,13115,13704,15745,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	76809180	76812861	chr14:76809180-76812861	0	-	76809180	76809569	789624	3	463,166,98,	0,908,3583,
#Partially deleted in new
chr14	76809213	76812568	chr14:76809213-76812568	0	-	76809213	76809213	8553170	2	430,264,	0,3091,
#Partially deleted in new
chr14	76809351	76826246	chr14:76809351-76826246	0	-	76809351	76814409	8553170	3	292,115,170,	0,4955,16725,
#Partially deleted in new
chr14	76826371	76870302	chr14:76826371-76870302	0	+	76826495	76844874	789624	13	212,129,173,108,50,82,86,195,96,147,108,83,178,	0,1919,4831,9835,18051,18448,25993,26844,31008,34321,39596,40984,43753,
#Partially deleted in new
chr14	76826371	76870206	chr14:76826371-76870206	3	+	76826495	76870149	789624	14	212,129,173,108,97,50,82,86,195,96,147,108,83,82,	0,1919,4831,9835,11503,18051,18448,25993,26844,31008,34321,39596,40984,43753,
#Partially deleted in new
chr14	76826381	76831293	chr14:76826381-76831293	0	+	76826495	76826618	789624	3	353,129,91,	0,1909,4821,
#Partially deleted in new
chr14	76826383	76870302	chr14:76826383-76870302	0	+	76826495	76826618	789624	15	351,129,73,173,108,97,50,82,86,125,96,147,108,83,178,	0,1907,2707,4819,9823,11491,18039,18436,25981,26902,30996,34309,39584,40972,43741,
#Partially deleted in new
chr14	76826386	76844472	chr14:76826386-76844472	0	+	76826386	76826386	8553170	7	348,466,73,173,108,97,50,	0,1904,2704,4816,9820,11488,18036,
#Deleted in new
chr14	76826386	76828669	chr14:76826386-76828669	0	+	76826495	76828669	789624	2	197,379,	0,1904,
#Deleted in new
chr14	76886376	76886750	chr14:76886376-76886750	7	-	76886376	76886376	16724991	1	374,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	76890262	76890613	chr14:76890262-76890613	3	+	76890262	76890262	8553170	1	351,	0,
#Deleted in new
chr14	76921839	76924649	chr14:76921839-76924649	3	-	76921839	76921839	8553170	4	228,132,196,200,	0,1385,1713,2610,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	76958097	77000609	chr14:76958097-77000609	3	-	76958097	76958097	8553170	2	2732,115,	0,42397,
#Partially deleted in new
chr14	76959637	76965802	chr14:76959637-76965802	3	+	76959637	76959637	789624	3	116,277,188,	0,2693,5977,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	76967517	76967765	chr14:76967517-76967765	3	-	76967517	76967517	8553170	1	248,	0,
#Partially deleted in new
chr14	76968682	76969145	chr14:76968682-76969145	7	+	76968682	76968682	16724991	1	463,	0,
#Deleted in new
chr14	77024542	77028699	chr14:77024542-77028699	3	-	77025401	77027792	0	1	4157,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	77028085	77031572	chr14:77028085-77031572	3	+	77028085	77028085	8553170	1	3487,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	77041063	77069503	chr14:77041063-77069503	3	+	77041063	77041063	789624	4	214,191,124,2395,	0,18474,25007,26045,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	77048171	77086446	chr14:77048171-77086446	3	-	77048171	77048171	8553170	3	250,139,80,	0,33190,38195,
#Partially deleted in new
chr14	77070662	77076344	chr14:77070662-77076344	0	-	77070662	77070662	8553170	2	184,240,	0,5442,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	77074541	77076142	chr14:77074541-77076142	1	-	77074541	77074541	8553170	2	823,38,	0,1563,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	77098096	77117287	chr14:77098096-77117287	3	+	77105708	77114318	789624	4	265,188,170,3863,	0,7560,11715,15328,
#Partially deleted in new
chr14	77098125	77113566	chr14:77098125-77113566	1	+	77105708	77113474	789624	3	236,188,142,	0,7531,15299,
#Partially deleted in new
chr14	77098257	77106090	chr14:77098257-77106090	0	+	77098257	77098257	8553170	2	104,434,	0,7399,
#Partially deleted in new
chr14	77098281	77113545	chr14:77098281-77113545	1	+	77105708	77113390	789624	4	80,188,170,161,	0,7375,11530,15103,
#Partially deleted in new
chr14	77098310	77225462	chr14:77098310-77225462	3	+	77105708	77218838	789624	6	51,188,163,80,82,39,	0,7346,120490,121187,121695,127113,
#Partially deleted in new
chr14	77098311	77113522	chr14:77098311-77113522	0	+	77105708	77113522	789624	5	50,78,188,170,98,	0,1572,7345,11500,15113,
#Partially deleted in new
chr14	77098365	77113588	chr14:77098365-77113588	0	+	77105708	77113588	789624	4	360,188,170,164,	0,7291,11446,15059,
#Partially deleted in new
chr14	77099112	77113572	chr14:77099112-77113572	0	+	77105708	77113572	789624	4	90,188,170,148,	0,6544,10699,14312,
#Partially deleted in new
chr14	77099175	77113542	chr14:77099175-77113542	0	+	77105708	77113542	789624	5	27,78,188,170,118,	0,708,6481,10636,14249,
#Partially deleted in new
chr14	77116567	77218884	chr14:77116567-77218884	0	+	77218813	77218884	789624	4	275,160,63,84,	0,79503,96878,102233,
#Partially deleted in new
chr14	77131269	77141791	chr14:77131269-77141791	3	-	77133682	77139738	789624	3	2679,540,189,	0,7943,10333,
#Deleted in new
chr14	77139409	77140744	chr14:77139409-77140744	0	-	77139409	77139738	789624	2	343,202,	0,1133,
#Deleted in new
chr14	77139616	77142734	chr14:77139616-77142734	0	-	77139616	77139738	789624	3	136,97,155,	0,2573,2963,
#Deleted in new
chr14	77140682	77142996	chr14:77140682-77142996	3	+	77140682	77140682	8553170	1	2314,	0,
#Deleted in new
chr14	77173074	77173652	chr14:77173074-77173652	7	-	77173074	77173074	16724991	1	578,	0,
#Partially deleted in new
chr14	77175849	77219501	chr14:77175849-77219501	0	+	77218813	77219501	789624	5	125,160,63,163,4,	0,20221,37596,42951,43648,
#Partially deleted in new
chr14	77175852	77218922	chr14:77175852-77218922	0	+	77218813	77218922	789624	5	122,160,60,63,122,	0,20218,36401,37593,42948,
#Partially deleted in new
chr14	77175855	77213630	chr14:77175855-77213630	0	+	77175855	77175855	8553170	3	119,160,185,	0,20215,37590,
#Partially deleted in new
chr14	77181622	77231730	chr14:77181622-77231730	0	+	77218813	77231730	789624	8	275,160,63,163,80,82,38,143,	0,14448,31823,37178,37875,38383,43801,49965,
#Partially deleted in new
chr14	77181826	77259495	chr14:77181826-77259495	3	+	77218813	77256726	789624	24	68,63,163,80,82,38,143,49,109,74,81,124,134,123,154,107,87,66,163,106,168,110,72,2970,	0,31619,36974,37671,38179,43597,49761,51625,54797,56867,57585,57776,58648,60520,61076,62522,64113,64782,66520,66940,67464,69962,71478,74699,
#Partially deleted in new
chr14	77181826	77218963	chr14:77181826-77218963	0	+	77218813	77218963	789624	4	71,160,63,163,	0,14244,31619,36974,
#Deleted in new
chr14	77201025	77201140	chr14:77201025-77201140	3	-	77201025	77201025	8553170	1	115,	0,
#Partially deleted in new
chr14	77251708	77256794	chr14:77251708-77256794	0	+	77251708	77251708	8553170	3	190,72,269,	0,1596,4817,
#Partially deleted in new
chr14	77265482	77271312	chr14:77265482-77271312	3	-	77266535	77270937	0	4	1188,120,112,464,	0,2983,3732,5366,
#Deleted in new
chr14	77266217	77266290	chr14:77266217-77266290	3	+	77266217	77266217	5263520	1	73,	0,
#Partially deleted in new
chr14	77274955	77320884	chr14:77274955-77320884	3	-	77277375	77320681	789624	21	2526,115,141,106,60,72,77,92,152,79,70,67,110,83,107,160,109,109,105,85,451,	0,3438,3773,4867,5065,5436,8841,9994,10525,11788,13806,16358,21208,23733,24499,26134,27879,29736,31381,36993,45478,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr14	77274957	77320704	chr14:77274957-77320704	0	-	77274957	77274957	8553170	20	2524,115,1200,60,72,77,92,152,79,70,67,110,83,107,160,109,109,105,85,271,	0,3436,3771,5063,5434,8839,9992,10523,11786,13804,16356,21206,23731,24497,26132,27877,29734,31379,36991,45476,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr14	77274957	77301163	chr14:77274957-77301163	0	-	77274957	77274957	8553170	15	2524,115,141,106,60,72,77,92,152,79,70,67,110,83,1709,	0,3436,3771,4865,5063,5434,8839,9992,10523,11786,13804,16356,21206,23731,24497,
#Partially deleted in new
chr14	77276982	77279928	chr14:77276982-77279928	0	-	77276982	77279928	789624	4	296,115,141,106,	0,1411,1746,2840,
#Partially deleted in new
chr14	77276990	77279909	chr14:77276990-77279909	0	-	77277375	77279909	789624	3	491,115,87,	0,1403,2832,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	77277414	77280074	chr14:77277414-77280074	0	-	77278893	77280074	789624	5	67,115,233,106,54,	0,979,1314,2408,2606,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	77278285	77279061	chr14:77278285-77279061	0	-	77278285	77278285	8553170	2	223,333,	0,443,
#Partially deleted in new
chr14	77278772	77283852	chr14:77278772-77283852	0	-	77278772	77283852	789624	6	97,50,245,60,72,56,	0,764,911,1248,1619,5024,
#Partially deleted in new
chr14	77278812	77285603	chr14:77278812-77285603	0	-	77278812	77278812	8553170	7	57,392,60,72,77,92,123,	0,724,1208,1579,4984,6137,6668,
#Partially deleted in new
chr14	77280305	77284363	chr14:77280305-77284363	0	-	77280305	77280305	8553170	2	158,567,	0,3491,
#Deleted in new
chr14	77284968	77287824	chr14:77284968-77287824	0	-	77284968	77284968	8553170	4	73,152,79,245,	0,512,1775,2611,
#Partially deleted in new
chr14	77285280	77291367	chr14:77285280-77291367	0	-	77285280	77285280	8553170	4	352,79,70,54,	0,1463,3481,6033,
#Partially deleted in new
chr14	77285479	77296507	chr14:77285479-77296507	0	-	77285479	77285479	8553170	6	153,79,70,67,110,96,	0,1264,3282,5834,10684,10932,
#Deleted in new
chr14	77285566	77287209	chr14:77285566-77287209	0	-	77285566	77285566	8553170	2	66,466,	0,1177,
#Partially deleted in new
chr14	77286747	77291493	chr14:77286747-77291493	0	-	77286747	77286747	8553170	4	75,39,70,180,	0,485,2014,4566,
#Partially deleted in new
chr14	77296163	77304746	chr14:77296163-77304746	0	-	77299457	77304746	789624	4	110,83,107,55,	0,2525,3291,8528,
#Partially deleted in new
chr14	77299477	77306503	chr14:77299477-77306503	0	-	77299477	77299477	8553170	5	84,160,109,109,102,	0,1612,3357,5214,6924,
#Partially deleted in new
chr14	77299523	77320860	chr14:77299523-77320860	0	-	77306440	77320681	789624	6	38,160,109,109,105,427,	0,1566,3311,5168,6813,20910,
#Deleted in new
chr14	77301088	77306490	chr14:77301088-77306490	0	-	77301088	77301088	8553170	4	161,109,109,154,	0,1746,3603,5248,
#Deleted in new
chr14	77302833	77306897	chr14:77302833-77306897	0	-	77302833	77302833	8553170	4	110,109,196,266,	0,1858,3412,3798,
#Partially deleted in new
chr14	77304693	77312379	chr14:77304693-77312379	0	-	77304693	77304693	8553170	4	107,196,85,82,	0,1552,7255,7604,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	77304772	77312635	chr14:77304772-77312635	0	-	77304772	77304772	8553170	4	28,105,85,338,	0,1564,7176,7525,
#Partially deleted in new
chr14	77320883	77331597	chr14:77320883-77331597	3	+	77321168	77331195	789624	9	300,52,68,81,126,79,53,50,529,	0,3986,5954,6588,7028,8239,8871,9426,10185,
#Partially deleted in new
chr14	77320995	77331195	chr14:77320995-77331195	1	+	77327501	77331195	789624	10	188,186,52,68,81,126,79,53,50,127,	0,1551,3874,5842,6476,6916,8127,8759,9314,10073,
#Partially deleted in new
chr14	77320998	77328298	chr14:77320998-77328298	0	+	77320998	77320998	8553170	4	185,52,68,827,	0,3871,5839,6473,
#Partially deleted in new
chr14	77321014	77331227	chr14:77321014-77331227	1	+	77321168	77331195	789624	9	169,52,68,39,126,79,53,50,159,	0,3855,5823,6457,6897,8108,8740,9295,10054,
#Partially deleted in new
chr14	77321019	77331320	chr14:77321019-77331320	1	+	77327501	77331195	789624	8	164,68,81,126,79,53,50,252,	0,5818,6452,6892,8103,8735,9290,10049,
#Partially deleted in new
chr14	77321024	77331393	chr14:77321024-77331393	1	+	77321168	77331195	789624	8	159,52,68,81,79,53,50,325,	0,3845,5813,6447,8098,8730,9285,10044,
#Partially deleted in new
chr14	77321031	77325280	chr14:77321031-77325280	0	+	77321031	77321031	8553170	2	152,411,	0,3838,
#Partially deleted in new
chr14	77321037	77329497	chr14:77321037-77329497	0	+	77321037	77321037	8553170	6	146,52,68,81,126,375,	0,3832,5800,6434,6874,8085,
#Partially deleted in new
chr14	77321037	77331413	chr14:77321037-77331413	1	+	77321168	77331195	789624	8	146,52,68,126,79,53,50,345,	0,3832,5800,6874,8085,8717,9272,10031,
#Partially deleted in new
chr14	77321077	77331211	chr14:77321077-77331211	1	+	77327501	77331195	789624	7	106,68,81,79,53,50,143,	0,5760,6394,8045,8677,9232,9991,
#Partially deleted in new
chr14	77321093	77327246	chr14:77321093-77327246	0	+	77321093	77321093	8553170	3	90,52,409,	0,3776,5744,
#Partially deleted in new
chr14	77321362	77331596	chr14:77321362-77331596	1	+	77327501	77331195	789624	10	201,186,52,68,81,126,79,53,50,528,	0,1184,3507,5475,6109,6549,7760,8392,8947,9706,
#Partially deleted in new
chr14	77321362	77328037	chr14:77321362-77328037	0	+	77327501	77328037	789624	6	201,186,52,68,81,126,	0,1184,3507,5475,6109,6549,
#Partially deleted in new
chr14	77321468	77327786	chr14:77321468-77327786	0	+	77321468	77321468	8553170	4	95,52,68,315,	0,3401,5369,6003,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	77322721	77331492	chr14:77322721-77331492	0	+	77322721	77322721	8553170	6	4184,566,79,53,50,424,	0,4750,6401,7033,7588,8347,
#Partially deleted in new
chr14	77324568	77331484	chr14:77324568-77331484	1	+	77324604	77331195	789624	9	54,52,68,81,126,79,53,50,416,	0,301,2269,2903,3343,4554,5186,5741,6500,
#Partially deleted in new
chr14	77324569	77327974	chr14:77324569-77327974	0	+	77327501	77327974	789624	4	352,68,81,63,	0,2268,2902,3342,
#Deleted in new
chr14	77327989	77331488	chr14:77327989-77331488	0	+	77327989	77330263	789624	5	48,79,53,129,420,	0,1133,1765,2241,3079,
#Deleted in new
chr14	77328439	77331486	chr14:77328439-77331486	0	+	77328439	77328439	8553170	2	1920,418,	0,2629,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	77335020	77377109	chr14:77335020-77377109	3	-	77341770	77377053	789624	6	6968,306,127,130,79,174,	0,8157,8676,11328,16652,41915,
#Deleted in new
chr14	77359422	77359916	chr14:77359422-77359916	7	+	77359422	77359422	16724991	1	494,	0,
#Partially deleted in new
chr14	77376688	77391268	chr14:77376688-77391268	1	+	77380451	77391244	789624	3	52,99,261,	0,3694,14319,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	77377132	77391497	chr14:77377132-77391497	3	+	77377418	77391244	789624	3	1975,99,490,	0,3250,13875,
#Partially deleted in new
chr14	77394020	77423056	chr14:77394020-77423056	3	-	77394630	77422889	789624	6	785,223,152,181,194,322,	0,11892,12703,13444,19913,28714,
#Partially deleted in new
chr14	77394442	77423056	chr14:77394442-77423056	0	-	77394442	77394442	8553170	5	363,963,181,194,322,	0,11470,13022,19491,28292,
#Partially deleted in new
chr14	77406735	77423517	chr14:77406735-77423517	0	-	77406735	77422889	789624	5	140,181,194,172,47,	0,729,7198,15999,16735,
#Partially deleted in new
chr14	77426674	77457561	chr14:77426674-77457561	1	-	77427615	77454102	789624	20	962,105,90,87,90,42,135,76,74,28,103,34,93,57,65,39,103,93,271,67,	0,1695,2331,3006,7167,7587,8584,9169,11133,14391,15885,16444,17574,21819,22618,23039,26624,27335,30420,30820,
#Partially deleted in new
chr14	77426674	77457561	chr14:77426674-77457561	1	-	77427615	77454102	789624	21	962,105,90,87,90,42,135,76,74,28,103,34,93,57,65,39,147,103,93,271,67,	0,1695,2331,3006,7167,7587,8584,9169,11133,14391,15885,16444,17574,21819,22618,23039,24512,26624,27335,30420,30820,
#Partially deleted in new
chr14	77426674	77457605	chr14:77426674-77457605	1	-	77427615	77454102	789624	20	962,105,90,87,90,42,135,76,74,28,103,34,93,57,65,39,147,103,93,511,	0,1695,2331,3006,7167,7587,8584,9169,11133,14391,15885,16444,17574,21819,22618,23039,24512,26624,27335,30420,
#Partially deleted in new
chr14	77426681	77457640	chr14:77426681-77457640	3	-	77427615	77454102	789624	20	955,105,90,87,90,42,135,76,74,28,103,34,93,57,65,39,147,103,93,146,	0,1688,2324,2999,7160,7580,8577,9162,11126,14384,15878,16437,17567,21812,22611,23032,24505,26617,27328,30813,
#Partially deleted in new
chr14	77427419	77457586	chr14:77427419-77457586	1	-	77427615	77454102	789624	19	217,105,90,87,90,42,135,76,74,28,103,34,93,57,65,39,103,93,92,	0,950,1586,2261,6422,6842,7839,8424,10388,13646,15140,15699,16829,21074,21873,22294,25879,26590,30075,
#Partially deleted in new
chr14	77427513	77457565	chr14:77427513-77457565	1	-	77427615	77457395	789624	20	123,105,90,87,90,42,135,76,74,28,103,34,93,57,65,39,147,103,93,248,	0,856,1492,2167,6328,6748,7745,8330,10294,13552,15046,15605,16735,20980,21779,22200,23673,25785,26496,29804,
#Partially deleted in new
chr14	77435170	77443161	chr14:77435170-77443161	0	-	77435170	77435170	8553170	6	223,76,74,28,103,43,	0,673,2637,5895,7389,7948,
#Partially deleted in new
chr14	77437807	77453384	chr14:77437807-77453384	0	-	77437807	77437807	8553170	10	74,108,103,34,93,57,65,39,147,86,	0,3258,4752,5311,6441,10686,11485,11906,13379,15491,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	77440259	77444290	chr14:77440259-77444290	0	-	77440259	77440259	8553170	5	237,28,103,34,42,	0,806,2300,2859,3989,
#Partially deleted in new
chr14	77453358	77457572	chr14:77453358-77457572	0	-	77453358	77454102	789624	4	43,93,319,78,	0,651,3736,4136,
#Deleted in new
chr14	77457279	77457952	chr14:77457279-77457952	0	-	77457279	77457279	8553170	2	82,458,	0,215,
#Partially deleted in new
chr14	77457869	77469247	chr14:77457869-77469247	0	+	77462692	77469247	789624	9	113,191,83,118,89,129,102,52,171,	0,1746,4290,4772,6728,7669,10213,10587,11207,
#Partially deleted in new
chr14	77458029	77469474	chr14:77458029-77469474	3	+	77458189	77469249	0	9	240,191,83,118,89,129,102,52,398,	0,1586,4130,4612,6568,7509,10053,10427,11047,
#Partially deleted in new
chr14	77458032	77462319	chr14:77458032-77462319	0	+	77458032	77458032	8553170	3	237,191,160,	0,1583,4127,
#Deleted in new
chr14	77458036	77460214	chr14:77458036-77460214	1	+	77458189	77459838	789624	2	233,599,	0,1579,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	77458216	77463101	chr14:77458216-77463101	0	+	77458216	77458216	8553170	4	53,191,83,460,	0,1399,3943,4425,
#Partially deleted in new
chr14	77459668	77464690	chr14:77459668-77464690	0	+	77459668	77459668	8553170	4	138,83,118,93,	0,2491,2973,4929,
#Partially deleted in new
chr14	77459699	77468319	chr14:77459699-77468319	0	+	77459699	77468205	789624	6	107,83,118,89,129,237,	0,2460,2942,4898,5839,8383,
#Partially deleted in new
chr14	77459744	77469470	chr14:77459744-77469470	0	+	77459744	77459744	8553170	4	62,83,102,394,	0,2415,8338,9332,
#Partially deleted in new
chr14	77459780	77469470	chr14:77459780-77469470	0	+	77459780	77469249	789624	4	26,83,118,394,	0,2379,2861,9296,
#Partially deleted in new
chr14	77464582	77469250	chr14:77464582-77469250	0	+	77464582	77464582	8553170	5	104,129,102,52,174,	0,956,3500,3874,4494,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	77465573	77469472	chr14:77465573-77469472	0	+	77465573	77468612	789624	5	94,102,52,100,501,	0,2509,2883,3016,3398,
#Deleted in new
chr14	77466283	77466436	chr14:77466283-77466436	3	+	77466283	77466283	8553170	1	153,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	77468795	77469470	chr14:77468795-77469470	0	+	77468795	77468795	8553170	2	190,394,	0,281,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	77474393	77498816	chr14:77474393-77498816	0	-	77498238	77498793	789624	8	1719,84,141,346,243,243,105,164,	0,3848,4181,7928,9929,10283,23830,24259,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	77474396	77498850	chr14:77474396-77498850	3	-	77475594	77498793	789624	7	1716,84,141,346,243,243,198,	0,3845,4178,7925,9926,10280,24256,
#Partially deleted in new
chr14	77475248	77498816	chr14:77475248-77498816	1	-	77476085	77498793	789624	6	864,84,141,243,243,164,	0,2993,3326,9074,9428,23404,
#Partially deleted in new
chr14	77475839	77482899	chr14:77475839-77482899	0	-	77475839	77475839	8553170	4	273,84,141,578,	0,2402,2735,6482,
#Partially deleted in new
chr14	77482495	77498816	chr14:77482495-77498816	0	-	77482495	77498793	789624	3	172,243,164,	0,2181,16157,
#Partially deleted in new
chr14	77482590	77498666	chr14:77482590-77498666	0	-	77498445	77498666	789624	4	77,243,243,350,	0,1732,2086,15726,
#Partially deleted in new
chr14	77483826	77498807	chr14:77483826-77498807	0	-	77483826	77483826	8553170	3	739,243,155,	0,850,14826,
#Partially deleted in new
chr14	77484399	77498758	chr14:77484399-77498758	0	-	77498445	77498758	789624	3	166,243,535,	0,277,13824,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	77505996	77616773	chr14:77505996-77616773	3	-	77512283	77616579	789624	12	6407,130,136,127,220,106,94,125,149,155,195,326,	0,12041,15449,46099,49303,51044,56399,64387,70770,72958,91189,110451,
#Partially deleted in new
chr14	77512340	77552192	chr14:77512340-77552192	0	-	77521589	77552192	789624	4	63,130,170,97,	0,5697,9105,39755,
#Partially deleted in new
chr14	77535599	77597321	chr14:77535599-77597321	0	-	77535895	77597321	789624	9	406,127,220,106,94,125,149,155,136,	0,16496,19700,21441,26796,34784,41167,43355,61586,
#Partially deleted in new
chr14	77552119	77557321	chr14:77552119-77557321	0	-	77552119	77552119	8553170	3	103,220,281,	0,3180,4921,
#Partially deleted in new
chr14	77552128	77554926	chr14:77552128-77554926	0	-	77552128	77552128	8553170	2	94,169,	0,2629,
#Partially deleted in new
chr14	77578765	77597351	chr14:77578765-77597351	0	-	77578765	77578765	8553170	2	344,166,	0,18420,
#Deleted in new
chr14	77652826	77653055	chr14:77652826-77653055	7	-	77652826	77652826	16724991	1	229,	0,
#Partially deleted in new
chr14	77672403	77708020	chr14:77672403-77708020	3	-	77673811	77708004	789624	6	1838,194,91,163,109,199,	0,3252,7476,22334,31965,35418,
#Partially deleted in new
chr14	77673074	77708010	chr14:77673074-77708010	0	-	77679911	77708004	789624	5	1167,194,91,109,189,	0,2581,6805,31294,34747,
#Partially deleted in new
chr14	77674102	77707992	chr14:77674102-77707992	0	-	77679911	77707992	789624	5	139,139,91,109,171,	0,1553,5777,30266,33719,
#Partially deleted in new
chr14	77683201	77683989	chr14:77683201-77683989	7	-	77683201	77683201	16724991	2	372,118,	0,670,
#Partially deleted in new
chr14	77691732	77704452	chr14:77691732-77704452	0	-	77691732	77691732	8553170	3	250,163,84,	0,3005,12636,
#Deleted in new
chr14	77696590	77697377	chr14:77696590-77697377	7	+	77696590	77696590	16724991	1	787,	0,
#Partially deleted in new
chr14	77708070	77717598	chr14:77708070-77717598	3	+	77708111	77717561	789624	4	138,59,108,103,	0,2767,7701,9425,
#Partially deleted in new
chr14	77708070	77717594	chr14:77708070-77717594	1	+	77708111	77717494	789624	4	138,59,108,115,	0,2767,7701,9409,
#Partially deleted in new
chr14	77708078	77717598	chr14:77708078-77717598	1	+	77708111	77717561	789624	4	130,59,108,97,	0,2759,7693,9423,
#Partially deleted in new
chr14	77708102	77761104	chr14:77708102-77761104	1	+	77708111	77760763	789624	4	106,59,108,452,	0,2735,7669,52550,
#Partially deleted in new
chr14	77708102	77721107	chr14:77708102-77721107	1	+	77708111	77720548	789624	4	106,59,108,592,	0,2735,7669,12413,
#Partially deleted in new
chr14	77708113	77717593	chr14:77708113-77717593	0	+	77708113	77710580	789624	5	95,111,59,108,98,	0,2441,2724,7658,9382,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	77708118	77716351	chr14:77708118-77716351	0	+	77708118	77715912	789624	3	90,59,580,	0,2719,7653,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	77708120	77712038	chr14:77708120-77712038	0	+	77708120	77708120	8553170	3	88,59,298,	0,2717,3620,
#Partially deleted in new
chr14	77708159	77760952	chr14:77708159-77760952	0	+	77708159	77733951	789624	5	49,59,108,110,300,	0,2678,7612,25777,52493,
#Partially deleted in new
chr14	77708159	77760952	chr14:77708159-77760952	0	+	77708159	77760763	789624	3	49,59,300,	0,2678,52493,
#Partially deleted in new
chr14	77708177	77717598	chr14:77708177-77717598	0	+	77708177	77715868	789624	4	31,43,108,103,	0,2660,7594,9318,
#Partially deleted in new
chr14	77710643	77717584	chr14:77710643-77717584	0	+	77710643	77710643	8553170	3	253,108,89,	0,5128,6852,
#Partially deleted in new
chr14	77717598	77761190	chr14:77717598-77761190	3	-	77718087	77761127	0	14	688,164,118,97,142,117,66,70,105,107,96,162,154,77,	0,768,3112,5582,13389,14886,17348,18338,19372,21179,21367,33720,37368,43515,
#Partially deleted in new
chr14	77717627	77761155	chr14:77717627-77761155	1	-	77718087	77738824	789624	11	659,164,118,97,142,117,66,70,105,107,42,	0,739,3083,5553,13360,14857,17319,18309,19343,21150,43486,
#Partially deleted in new
chr14	77717790	77761207	chr14:77717790-77761207	0	-	77754968	77761127	789624	14	496,164,118,97,142,117,66,70,105,107,96,162,132,94,	0,576,2920,5390,13197,14694,17156,18146,19180,20987,21175,33528,37176,43323,
#Partially deleted in new
chr14	77717952	77761156	chr14:77717952-77761156	1	-	77718062	77761127	789624	13	578,118,97,142,117,66,70,105,107,96,162,154,43,	0,2758,5228,13035,14532,16994,17984,19018,20825,21013,33366,37014,43161,
#Partially deleted in new
chr14	77730855	77737007	chr14:77730855-77737007	0	-	77730855	77730855	8553170	5	274,117,66,70,37,	0,1629,4091,5081,6115,
#Partially deleted in new
chr14	77732538	77761156	chr14:77732538-77761156	0	-	77732538	77761127	789624	6	63,66,96,162,154,43,	0,2408,6427,18780,22428,28575,
#Partially deleted in new
chr14	77738737	77761156	chr14:77738737-77761156	0	-	77738737	77738737	8553170	5	147,96,162,154,43,	0,228,12581,16229,22376,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	77760829	77769742	chr14:77760829-77769742	3	+	77761042	77769678	789624	3	287,14,345,	0,7622,8568,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	77760829	77769742	chr14:77760829-77769742	1	+	77769399	77769678	789624	2	287,345,	0,8568,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	77760833	77769742	chr14:77760833-77769742	0	+	77760833	77760833	8553170	3	283,14,345,	0,7618,8564,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	77760973	77769728	chr14:77760973-77769728	0	+	77760973	77760973	8553170	3	143,72,331,	0,7478,8424,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	77760973	77769728	chr14:77760973-77769728	0	+	77760973	77760973	8553170	2	143,331,	0,8424,
#Partially deleted in new
chr14	77800082	77933954	chr14:77800082-77933954	3	+	77818978	77933391	789624	11	88,146,84,204,159,159,117,150,198,194,735,	0,18885,22352,58993,87008,99017,107720,124374,125681,131435,133137,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	77800116	77887249	chr14:77800116-77887249	0	+	77818978	77859107	789624	6	54,146,84,118,204,159,	0,18851,22318,27737,58959,86974,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	77800119	77925961	chr14:77800119-77925961	0	+	77818978	77900633	789624	9	51,146,84,204,159,116,117,150,198,	0,18848,22315,58956,98980,100439,107683,124337,125644,
#Partially deleted in new
chr14	77800134	77924512	chr14:77800134-77924512	0	+	77818978	77924512	789624	7	36,146,84,204,159,159,56,	0,18833,22300,58941,86956,98965,124322,
#Partially deleted in new
chr14	77800138	77933952	chr14:77800138-77933952	1	+	77818978	77933391	789624	10	32,146,84,159,159,117,150,198,194,733,	0,18829,22296,86952,98961,107664,124318,125625,131379,133081,
#Partially deleted in new
chr14	77902384	77924575	chr14:77902384-77924575	0	+	77902384	77902384	8553170	3	364,117,119,	0,5418,22072,
#Partially deleted in new
chr14	77908176	77933521	chr14:77908176-77933521	0	+	77908176	77908176	8553170	5	202,150,198,194,302,	0,16280,17587,23341,25043,
#Partially deleted in new
chr14	77923231	77935012	chr14:77923231-77935012	0	+	77923231	77923231	8553170	4	1375,198,194,1793,	0,2532,8286,9988,
#Deleted in new
chr14	78059941	78060278	chr14:78059941-78060278	7	-	78059941	78059941	16724991	1	337,	0,
#Partially deleted in new
chr14	78170372	79862033	chr14:78170372-79862033	1	+	78243093	79861964	789624	20	302,1412,30,12,302,162,439,384,204,120,382,191,174,120,182,172,90,308,88,995,	0,72018,127458,130307,474747,480792,538844,544383,633247,786869,795652,796835,797800,817649,1296848,1493405,1521800,1527257,1634739,1690666,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	78177802	78177921	chr14:78177802-78177921	7	-	78177802	78177802	16724991	1	119,	0,
#Deleted in new
chr14	78231280	78231619	chr14:78231280-78231619	7	-	78231280	78231280	16724991	1	339,	0,
#Partially deleted in new
chr14	78242390	79862033	chr14:78242390-79862033	0	+	78243093	79853648	789624	20	1412,30,12,302,162,439,384,204,120,382,191,174,120,182,172,90,308,88,679,995,	0,55440,58289,402729,408774,466826,472365,561229,714851,723634,724817,725782,745631,1224830,1421387,1449782,1455239,1562721,1611148,1618648,
#Partially deleted in new
chr14	78243036	79862445	chr14:78243036-79862445	3	+	78243093	79861964	789624	20	766,18,30,302,162,439,384,204,27,120,382,191,174,120,182,172,90,308,79,1104,	0,35608,54794,402083,408128,466180,471719,560583,567281,714205,722988,724171,725136,744985,1224184,1420741,1449136,1454593,1562075,1618305,
#Partially deleted in new
chr14	78243601	78645427	chr14:78243601-78645427	0	+	78243601	78243601	8553170	4	201,18,30,308,	0,35043,54229,401518,
#Partially deleted in new
chr14	78278642	78651311	chr14:78278642-78651311	0	+	78278642	78651311	789624	5	20,30,302,24,147,	0,19188,366477,370625,372522,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	78279571	78283376	chr14:78279571-78283376	3	-	78279571	78279571	8553170	3	133,83,309,	0,2827,3496,
#Partially deleted in new
chr14	78403730	78709507	chr14:78403730-78709507	0	+	78709282	78709507	789624	3	148,70,291,	0,198689,305486,
#Partially deleted in new
chr14	78403749	79862443	chr14:78403749-79862443	1	+	78651224	79861964	789624	17	129,302,162,439,384,204,27,120,382,191,174,120,182,172,308,79,781,	0,241370,247415,305467,311006,399870,406568,553492,562275,563458,564423,584272,1063471,1260028,1293880,1401362,1457913,
#Partially deleted in new
chr14	78614931	78988299	chr14:78614931-78988299	1	+	78614992	78988236	789624	12	101,302,162,439,384,204,27,120,382,191,174,278,	0,30188,36233,94285,99824,188688,195386,342310,351093,352276,353241,373090,
#Partially deleted in new
chr14	78614931	78988299	chr14:78614931-78988299	0	+	78614931	78614931	8553170	11	101,302,162,439,384,204,120,382,191,174,278,	0,30188,36233,94285,99824,188688,342310,351093,352276,353241,373090,
#Partially deleted in new
chr14	78645119	78988141	chr14:78645119-78988141	0	+	78645119	78645119	8553170	12	302,162,439,384,204,27,120,382,191,174,27,120,	0,6045,64097,69636,158500,165198,312122,320905,322088,323053,327763,342902,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	78695320	78698122	chr14:78695320-78698122	3	-	78695320	78695320	8553170	2	452,248,	0,2554,
#Partially deleted in new
chr14	78698219	78709641	chr14:78698219-78709641	0	+	78709282	78709641	789624	3	70,56,425,	0,10277,10997,
#Partially deleted in new
chr14	78703614	78709934	chr14:78703614-78709934	3	-	78703614	78703614	8553170	2	235,119,	0,6201,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	78744397	78753878	chr14:78744397-78753878	3	-	78744397	78744397	8553170	2	924,155,	0,9326,
#Partially deleted in new
chr14	79072131	79074762	chr14:79072131-79074762	3	-	79072131	79072131	8553170	2	344,215,	0,2416,
#Partially deleted in new
chr14	79072166	79074767	chr14:79072166-79074767	0	-	79072166	79072166	8553170	2	337,220,	0,2381,
#Deleted in new
chr14	79199981	79201632	chr14:79199981-79201632	3	+	79199981	79199981	789624	2	57,599,	0,1052,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	79246667	79249023	chr14:79246667-79249023	3	-	79246667	79246667	8553170	5	78,38,89,89,102,	0,397,591,1929,2254,
#Partially deleted in new
chr14	79279338	79862478	chr14:79279338-79862478	1	+	79280291	79861964	789624	6	1200,182,172,308,79,1440,	0,187882,384439,418291,525773,581700,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	79279412	79868290	chr14:79279412-79868290	1	+	79280291	79861964	789624	6	1126,182,172,308,88,6628,	0,187808,384365,418217,525699,582250,
#Partially deleted in new
chr14	79279905	79864417	chr14:79279905-79864417	1	+	79280291	79861964	789624	7	633,182,172,90,308,79,2755,	0,187315,383872,412267,417724,525206,581757,
#Partially deleted in new
chr14	79280262	79862454	chr14:79280262-79862454	0	+	79280291	79853648	789624	8	276,182,172,90,308,88,679,1416,	0,186958,383515,411910,417367,524849,573276,580776,
#Partially deleted in new
chr14	79280501	79663892	chr14:79280501-79663892	0	+	79280501	79280501	8553170	5	37,12,164,182,115,	0,351,1240,186719,383276,
#Partially deleted in new
chr14	79298794	79573011	chr14:79298794-79573011	0	+	79298794	79298794	8553170	4	114,182,66,168,	0,168426,271728,274049,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	79314050	79861959	chr14:79314050-79861959	0	+	79314050	79314050	8553170	4	99,182,172,297,	0,153170,349727,547612,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	79611417	79633311	chr14:79611417-79633311	3	-	79611417	79611417	8553170	3	413,114,24,	0,20860,21870,
#Partially deleted in new
chr14	79661665	79791263	chr14:79661665-79791263	3	-	79661665	79661665	8553170	4	114,71,151,58,	0,7476,98982,129540,
#Partially deleted in new
chr14	79893079	79974169	chr14:79893079-79974169	3	-	79893079	79893079	8553170	3	80,153,213,	0,79222,80877,
#Deleted in new
chr14	80197526	80211521	chr14:80197526-80211521	1	-	80205624	80211472	789624	5	5762,134,60,45,271,	0,8075,8704,8767,13724,
#Deleted in new
chr14	80197529	80211627	chr14:80197529-80211627	1	-	80202688	80211472	789624	2	5759,377,	0,13721,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	80197529	80231054	chr14:80197529-80231054	3	-	80202688	80211472	789624	4	5759,275,179,154,	0,13721,18442,33371,
#Deleted in new
chr14	80202502	80211314	chr14:80202502-80211314	0	-	80205624	80211314	789624	3	786,134,64,	0,3099,8748,
#Deleted in new
chr14	80202597	80211500	chr14:80202597-80211500	1	-	80202688	80211472	789624	3	691,108,250,	0,3633,8653,
#Deleted in new
chr14	80202617	80211472	chr14:80202617-80211472	1	-	80202963	80211472	789624	2	469,48,	0,8807,
#Deleted in new
chr14	80202818	80211314	chr14:80202818-80211314	0	-	80206290	80211314	789624	4	470,134,108,64,	0,2783,3412,8432,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	80211308	80387757	chr14:80211308-80387757	0	-	80211308	80211472	789624	4	217,179,93,80,	0,4663,67118,176369,
#Deleted in new
chr14	80211453	80212178	chr14:80211453-80212178	0	-	80211453	80211472	8553170	2	72,345,	0,380,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	80211454	80315876	chr14:80211454-80315876	0	-	80211454	80211472	8553170	5	71,176,48,93,103,	0,4517,5235,66972,104319,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	80278428	80315838	chr14:80278428-80315838	0	-	80278428	80278428	8553170	3	91,111,65,	0,35040,37345,
#Partially deleted in new
chr14	80490478	80580425	chr14:80490478-80580425	0	-	80497478	80580425	789624	7	244,114,109,114,78,24,52,	0,6990,14433,36390,40330,68800,89895,
#Partially deleted in new
chr14	80496473	80939540	chr14:80496473-80939540	1	-	80497478	80916547	789624	24	1109,109,114,78,24,50,193,60,177,165,651,351,152,133,75,87,117,73,92,119,127,87,162,156,	0,8438,30395,34335,62805,83900,246601,260418,264963,281408,288421,296286,334669,339731,341730,344208,366283,399244,403464,408339,409481,417848,419927,442911,
#Partially deleted in new
chr14	80496477	80941785	chr14:80496477-80941785	3	-	80497478	80916547	789624	25	1105,109,114,78,24,50,193,60,177,165,651,351,152,133,75,87,117,73,92,119,127,87,162,156,205,	0,8434,30391,34331,62801,83896,246597,260414,264959,281404,288417,296282,334665,339727,341726,344204,366279,399240,403460,408335,409477,417844,419923,442907,445103,
#Partially deleted in new
chr14	80497496	80531000	chr14:80497496-80531000	0	-	80497496	80497496	8553170	4	86,109,114,192,	0,7415,29372,33312,
#Partially deleted in new
chr14	80526683	80530960	chr14:80526683-80530960	0	-	80526683	80526683	8553170	2	299,152,	0,4125,
#Partially deleted in new
chr14	80742754	80761592	chr14:80742754-80761592	0	-	80743063	80761592	789624	3	513,60,156,	0,14137,18682,
#Partially deleted in new
chr14	80822523	80822796	chr14:80822523-80822796	7	+	80822523	80822523	16724991	1	273,	0,
#Partially deleted in new
chr14	80830164	80941687	chr14:80830164-80941687	1	-	80830184	80916547	789624	14	119,152,133,75,87,117,73,92,119,127,87,162,156,107,	0,978,6040,8039,10517,32592,65553,69773,74648,75790,84157,86236,109220,111416,
#Partially deleted in new
chr14	80830164	80904928	chr14:80830164-80904928	0	-	80831079	80904928	789624	8	1130,133,75,87,117,73,92,116,	0,6040,8039,10517,32592,65553,69773,74648,
#Partially deleted in new
chr14	80899972	80959484	chr14:80899972-80959484	0	-	80899972	80916547	789624	8	57,119,127,87,162,156,108,53,	0,4840,5982,14349,16428,39412,58205,59459,
#Partially deleted in new
chr14	80904909	80959501	chr14:80904909-80959501	0	-	80904909	80916547	789624	6	22,127,87,162,108,70,	0,1045,9412,11491,53268,54522,
#Partially deleted in new
chr14	80905470	80941701	chr14:80905470-80941701	0	-	80905470	80905470	8553170	5	611,87,162,156,121,	0,8851,10930,33914,36110,
#Partially deleted in new
chr14	80914315	80941719	chr14:80914315-80941719	0	-	80914315	80914375	789624	4	93,140,156,139,	0,2085,25069,27265,
#Partially deleted in new
chr14	80916451	80959504	chr14:80916451-80959504	0	-	80916451	80916547	789624	5	111,156,97,108,73,	0,22933,25832,41726,42980,
#Partially deleted in new
chr14	80945555	80959517	chr14:80945555-80959517	0	-	80945555	80945555	8553170	3	212,108,86,	0,12622,13876,
#Deleted in new
chr14	80954988	80955937	chr14:80954988-80955937	0	+	80954988	80954988	8553170	2	220,413,	0,536,
#Partially deleted in new
chr14	80955042	81146302	chr14:80955042-81146302	3	+	80955680	81144353	789624	11	166,326,72,75,75,75,78,69,78,189,3363,	0,482,107105,113211,132911,136026,137488,141596,153332,184636,187897,
#Partially deleted in new
chr14	80955430	81108950	chr14:80955430-81108950	1	+	80955680	81108681	789624	9	420,72,75,75,75,78,69,78,339,	0,106717,112823,132523,135638,137100,141208,152944,153181,
#Partially deleted in new
chr14	80955524	81146302	chr14:80955524-81146302	1	+	80955680	81144353	789624	10	326,72,75,75,75,78,69,78,189,3363,	0,106623,112729,132429,135544,137006,141114,152850,184154,187415,
#Partially deleted in new
chr14	80955580	81068473	chr14:80955580-81068473	0	+	80955580	80955580	8553170	3	270,72,220,	0,106567,112673,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	80955587	80995695	chr14:80955587-80995695	1	+	80955680	80991640	789624	2	263,4155,	0,35953,
#Partially deleted in new
chr14	80955628	81091132	chr14:80955628-81091132	0	+	80955680	81087926	789624	5	222,72,75,124,64,	0,106519,112625,132276,135440,
#Partially deleted in new
chr14	80955654	81108918	chr14:80955654-81108918	1	+	80955680	81108456	789624	8	196,72,75,75,75,78,69,544,	0,106493,112599,132299,135414,136876,140984,152720,
#Partially deleted in new
chr14	80955654	81108919	chr14:80955654-81108919	1	+	80955680	81108681	789624	9	196,72,75,75,75,78,69,78,371,	0,106493,112599,132299,135414,136876,140984,152720,152894,
#Partially deleted in new
chr14	80957797	80959506	chr14:80957797-80959506	0	-	80957797	80957797	8553170	2	488,75,	0,1634,
#Deleted in new
chr14	80981987	80983638	chr14:80981987-80983638	7	+	80981987	80981987	16724991	1	1651,	0,
#Deleted in new
chr14	81001165	81001786	chr14:81001165-81001786	7	-	81001165	81001165	16724991	2	52,473,	0,148,
#Deleted in new
chr14	81003324	81003645	chr14:81003324-81003645	7	-	81003324	81003324	16724991	1	321,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	81012098	81170224	chr14:81012098-81170224	3	-	81012098	81012098	8553170	8	2306,134,186,156,110,128,189,116,	0,41584,75368,81483,82116,87300,153094,158010,
#Deleted in new
chr14	81032528	81033404	chr14:81032528-81033404	7	+	81032528	81032528	16724991	1	876,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	81049425	81170414	chr14:81049425-81170414	1	-	81049425	81049425	8553170	8	4391,186,156,110,133,106,189,306,	0,38041,44156,44789,46008,57607,115767,120683,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	81078701	81143746	chr14:81078701-81143746	0	+	81078701	81078701	8553170	8	235,75,75,78,69,78,189,807,	0,9252,12367,13829,17937,29673,60977,64238,
#Deleted in new
chr14	81108348	81108840	chr14:81108348-81108840	0	+	81108348	81108348	8553170	2	104,229,	0,263,
#Deleted in new
chr14	81143155	81145988	chr14:81143155-81145988	0	+	81143155	81144353	789624	2	1746,642,	0,2191,
#Partially deleted in new
chr14	81175451	81220922	chr14:81175451-81220922	3	-	81180222	81220518	0	9	4879,90,321,134,76,65,205,102,434,	0,10079,17067,20656,21957,26142,28448,40961,45037,
#Partially deleted in new
chr14	81180177	81220952	chr14:81180177-81220952	0	-	81209888	81220518	789624	10	153,90,321,134,76,65,205,67,102,464,	0,5353,12341,15930,17231,21416,23722,29692,36235,40311,
#Partially deleted in new
chr14	81180208	81221231	chr14:81180208-81221231	1	-	81180222	81216427	0	9	122,90,321,134,76,65,205,102,84,	0,5322,12310,15899,17200,21385,23691,36204,40939,
#Partially deleted in new
chr14	81197226	81221377	chr14:81197226-81221377	0	-	81197226	81197226	8553170	5	258,65,205,102,234,	0,4367,6673,19186,23917,
#Deleted in new
chr14	81202694	81202834	chr14:81202694-81202834	3	-	81202694	81202694	789624	1	140,	0,
#Deleted in new
chr14	81221217	81222460	chr14:81221217-81222460	3	+	81221217	81221217	789624	2	308,822,	0,421,
#Deleted in new
chr14	81246294	81246563	chr14:81246294-81246563	7	-	81246294	81246294	16724991	1	269,	0,
#Deleted in new
chr14	81259564	81260239	chr14:81259564-81260239	7	-	81259564	81259564	16724991	1	675,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	81260655	81427404	chr14:81260655-81427404	1	-	81261781	81398382	0	8	1276,203,1839,198,285,286,111,104,	0,10014,16245,110332,135238,137639,166446,166645,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	81260781	81436459	chr14:81260781-81436459	1	-	81261781	81398382	8553170	9	1150,203,1839,171,198,285,286,111,139,	0,9888,16119,63235,110206,135112,137513,166320,175539,
#Partially deleted in new
chr14	81261781	81398583	chr14:81261781-81398583	1	-	81261781	81398382	0	6	150,203,1839,198,285,289,	0,8888,15119,109206,134112,136513,
#Partially deleted in new
chr14	81267081	81276998	chr14:81267081-81276998	0	-	81268413	81276998	789624	3	1416,203,98,	0,3588,9819,
#Partially deleted in new
chr14	81270428	81278818	chr14:81270428-81278818	0	-	81270428	81270428	8553170	2	444,1918,	0,6472,
#Partially deleted in new
chr14	81270506	81398583	chr14:81270506-81398583	3	-	81270564	81398382	0	5	366,1839,198,285,289,	0,6394,100481,125387,127788,
#Partially deleted in new
chr14	81278475	81323683	chr14:81278475-81323683	0	-	81278475	81278475	8553170	3	264,119,181,	0,28156,45027,
#Deleted in new
chr14	81332960	81333361	chr14:81332960-81333361	7	-	81332960	81332960	16724991	1	401,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	81394949	81418253	chr14:81394949-81418253	0	-	81394949	81394949	8553170	3	1229,286,91,	0,3345,23213,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	81396117	81436465	chr14:81396117-81436465	0	-	81396117	81398382	789624	4	61,286,111,145,	0,2177,30984,40203,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	81398372	81436207	chr14:81398372-81436207	0	-	81398372	81398382	8553170	3	208,111,120,	0,28729,37715,
#Deleted in new
chr14	81412969	81413239	chr14:81412969-81413239	7	+	81412969	81412969	16724991	1	270,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	81441986	81450157	chr14:81441986-81450157	3	-	81441986	81441986	789624	3	210,158,269,	0,298,7902,
#Partially deleted in new
chr14	81471548	81533861	chr14:81471548-81533861	3	-	81476971	81533744	789624	21	5633,129,173,75,166,149,88,63,78,69,57,155,82,60,54,163,106,168,232,38,187,	0,8063,12676,14123,14740,15841,16306,17703,18839,20931,23532,26343,26864,27910,28060,31172,32652,34525,55184,56152,62126,
#Partially deleted in new
chr14	81479277	81484528	chr14:81479277-81484528	0	-	81479277	81479277	8553170	2	463,304,	0,4947,
#Deleted in new
chr14	81488796	81490473	chr14:81488796-81490473	0	-	81488796	81488796	8553170	2	518,86,	0,1591,
#Partially deleted in new
chr14	81498357	81506155	chr14:81498357-81506155	0	-	81498357	81498357	8553170	6	137,60,54,163,106,82,	0,1101,1251,4363,5843,7716,
#Partially deleted in new
chr14	81498807	81533833	chr14:81498807-81533833	1	-	81499443	81533744	789624	8	711,54,163,106,168,232,38,159,	0,801,3913,5393,7266,27925,28893,34867,
#Partially deleted in new
chr14	81504262	81533849	chr14:81504262-81533849	0	-	81504262	81533744	789624	5	44,105,232,38,175,	0,1811,22470,23438,29412,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	81605346	81623061	chr14:81605346-81623061	3	-	81605346	81605346	789624	3	208,570,409,	0,1785,17306,
#Deleted in new
chr14	81661427	81662874	chr14:81661427-81662874	7	+	81661427	81661427	16724991	1	1447,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	81727779	81740272	chr14:81727779-81740272	0	-	81727779	81727779	8553170	2	441,36,	0,12457,
#Partially deleted in new
chr14	81734611	81743138	chr14:81734611-81743138	0	-	81734611	81734611	789624	3	243,40,100,	0,5625,8427,
#Deleted in new
chr14	81777015	81777613	chr14:81777015-81777613	7	-	81777015	81777015	16724991	1	598,	0,
#Deleted in new
chr14	81916230	81917888	chr14:81916230-81917888	7	+	81916230	81916230	16724991	1	1658,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	82429871	82430156	chr14:82429871-82430156	3	+	82429871	82429871	8553170	1	285,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	82642619	82651657	chr14:82642619-82651657	1	+	82642619	82642619	8553170	2	55,734,	0,8304,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	82642626	82657766	chr14:82642626-82657766	1	+	82642626	82642626	8553170	3	48,73,652,	0,8297,14488,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	82642631	82706825	chr14:82642631-82706825	3	+	82642631	82642631	789624	6	43,73,52,56,79,125,	0,8292,42748,44682,52158,64069,
#Partially deleted in new
chr14	82642635	82687370	chr14:82642635-82687370	0	+	82642635	82642635	8553170	3	39,73,57,	0,8288,44678,
#Deleted in new
chr14	82692703	82693055	chr14:82692703-82693055	7	-	82692703	82692703	16724991	1	352,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	82788477	82796221	chr14:82788477-82796221	3	-	82788477	82788477	8553170	2	390,149,	0,7595,
#Partially deleted in new
chr14	83017105	83018144	chr14:83017105-83018144	3	-	83017105	83017105	8553170	2	94,650,	0,389,
#Partially deleted in new
chr14	83018200	83039602	chr14:83018200-83039602	3	-	83018200	83018200	8553170	2	352,96,	0,21306,
#Partially deleted in new
chr14	83048578	83048640	chr14:83048578-83048640	3	+	83048578	83048578	8553170	1	62,	0,
#Partially deleted in new
chr14	83750383	83750501	chr14:83750383-83750501	3	+	83750383	83750383	8553170	1	118,	0,
#Partially deleted in new
chr14	83805495	83805640	chr14:83805495-83805640	7	-	83805495	83805495	16724991	1	145,	0,
#Partially deleted in new
chr14	83906871	83915050	chr14:83906871-83915050	3	-	83906871	83906871	8553170	3	310,94,72,	0,7076,8107,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	83986775	84140544	chr14:83986775-84140544	3	-	83986775	83986775	8553170	6	73,166,50,187,122,185,	0,1567,18745,22709,66636,153584,
#Deleted in new
chr14	84172840	84173606	chr14:84172840-84173606	7	+	84172840	84172840	16724991	1	766,	0,
#Deleted in new
chr14	84173790	84175510	chr14:84173790-84175510	7	+	84173790	84173790	16724991	1	1720,	0,
#Deleted in new
chr14	84176418	84177088	chr14:84176418-84177088	7	+	84176418	84176418	16724991	1	670,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	84739941	84740052	chr14:84739941-84740052	3	+	84739941	84739941	8553170	1	111,	0,
#Deleted in new
chr14	84951273	84951373	chr14:84951273-84951373	7	+	84951273	84951273	16724991	1	100,	0,
#Deleted in new
chr14	84998277	84999296	chr14:84998277-84999296	7	-	84998277	84998277	16724991	1	1019,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	85202848	85239474	chr14:85202848-85239474	3	-	85202848	85202848	8553170	3	384,138,71,	0,31940,36555,
#Partially deleted in new
chr14	85362456	85516934	chr14:85362456-85516934	3	-	85362456	85362456	8553170	5	84,117,183,64,110,	0,1512,35692,43460,154368,
#Deleted in new
chr14	85387274	85388765	chr14:85387274-85388765	3	+	85387274	85387274	789624	3	80,282,149,	0,905,1342,
#Partially deleted in new
chr14	85393878	85420074	chr14:85393878-85420074	3	+	85393878	85393878	789624	3	21,134,391,	0,14024,25805,
#Partially deleted in new
chr14	85393947	85420052	chr14:85393947-85420052	0	+	85393947	85393947	8553170	2	12,369,	0,25736,
#Partially deleted in new
chr14	85524431	85529988	chr14:85524431-85529988	3	-	85524431	85524431	8553170	2	1076,1372,	0,4185,
#Deleted in new
chr14	85528598	85529386	chr14:85528598-85529386	3	+	85528598	85528598	8553170	2	260,383,	0,405,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	85530143	85654426	chr14:85530143-85654426	3	+	85621514	85623497	789624	2	391,33288,	0,90995,
#Partially deleted in new
chr14	85530145	85552821	chr14:85530145-85552821	0	+	85530145	85530145	8553170	3	389,87,89,	0,21548,22587,
#Partially deleted in new
chr14	85530162	85563052	chr14:85530162-85563052	0	+	85530162	85530162	8553170	5	372,56,111,100,410,	0,1004,22570,31027,32480,
#Partially deleted in new
chr14	85530227	85624087	chr14:85530227-85624087	1	+	85621514	85623497	789624	2	329,2949,	0,90911,
#Partially deleted in new
chr14	85559308	85563050	chr14:85559308-85563050	0	+	85559308	85559308	8553170	3	107,100,352,	0,1881,3390,
#Deleted in new
chr14	85560862	85562743	chr14:85560862-85562743	0	+	85560862	85560862	8553170	2	427,101,	0,1780,
#Deleted in new
chr14	85623689	85626228	chr14:85623689-85626228	0	+	85623689	85623689	8553170	2	216,350,	0,2189,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	85934709	86128186	chr14:85934709-86128186	3	+	85934709	85934709	8553170	5	152,93,95,105,237,	0,66151,96426,136153,193240,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	85983945	86129778	chr14:85983945-86129778	1	+	85983945	85983945	8553170	5	77,105,167,109,283,	0,86917,144004,144719,145550,
#Partially deleted in new
chr14	86014685	86062960	chr14:86014685-86062960	3	-	86014685	86014685	8553170	6	364,69,144,45,67,79,	0,39848,40655,46832,47864,48196,
#Partially deleted in new
chr14	86070753	86105054	chr14:86070753-86105054	1	+	86070753	86070753	8553170	2	214,308,	0,33993,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	86332375	86401285	chr14:86332375-86401285	3	+	86332375	86332375	8553170	3	58,75,74,	0,4036,68836,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	86905777	86922755	chr14:86905777-86922755	3	+	86905777	86905777	789624	5	272,84,42,74,1291,	0,7698,8864,14483,15687,
#Partially deleted in new
chr14	86936639	86989125	chr14:86936639-86989125	3	+	86936639	86936639	8553170	3	188,65,159,	0,51348,52327,
#Deleted in new
chr14	87251102	87251679	chr14:87251102-87251679	3	+	87251102	87251102	8553170	2	119,213,	0,364,
#Partially deleted in new
chr14	87323752	87332390	chr14:87323752-87332390	3	+	87323752	87323752	8553170	3	60,122,187,	0,2715,8451,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	87353069	87573022	chr14:87353069-87573022	3	-	87353069	87353069	8553170	7	41,81,93,108,72,87,62,	0,15376,16670,53310,87120,87873,219891,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	87568180	87569399	chr14:87568180-87569399	3	+	87568180	87568180	8553170	3	97,107,343,	0,300,876,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	87634378	87655294	chr14:87634378-87655294	3	-	87634378	87634378	5263520	3	273,118,164,	0,1027,20752,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	87710418	87872291	chr14:87710418-87872291	3	-	87710418	87710418	8553170	7	372,56,63,105,120,93,17,	0,15536,31067,53287,105713,137396,161856,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	87725954	87734298	chr14:87725954-87734298	1	-	87725954	87725954	8553170	2	56,431,	0,7913,
#Partially deleted in new
chr14	87736401	87816251	chr14:87736401-87816251	1	-	87736401	87736401	8553170	3	588,105,120,	0,27304,79730,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	87810981	87838339	chr14:87810981-87838339	3	+	87810981	87810981	8553170	3	89,203,498,	0,2496,26860,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	87837819	87980648	chr14:87837819-87980648	0	-	87933972	87976476	789624	14	414,118,101,77,164,181,151,87,90,128,125,156,131,144,	0,55536,96079,102085,103575,107733,109908,112025,112839,125564,127685,130515,138538,142685,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr14	87933013	87993271	chr14:87933013-87993271	3	-	87934731	87993164	789624	17	1865,77,164,181,151,87,90,128,125,156,131,39,140,114,64,69,302,	0,6891,8381,12539,14714,16831,17645,30370,32491,35321,43344,49191,51380,53475,55130,55441,59956,
#Partially deleted in new
chr14	87933722	87992838	chr14:87933722-87992838	1	-	87933972	87992330	789624	17	277,77,164,181,151,87,90,128,125,156,131,39,140,114,64,69,535,	0,6182,7672,11830,14005,16122,16936,29661,31782,34612,42635,48482,50671,52766,54421,54732,58581,
#Partially deleted in new
chr14	87934330	87993665	chr14:87934330-87993665	1	-	87934731	87993499	789624	17	548,77,164,181,151,87,90,128,125,156,131,39,140,114,64,69,283,	0,5574,7064,11222,13397,15514,16328,29053,31174,34004,42027,47874,50063,52158,53813,54124,59052,
#Partially deleted in new
chr14	87934680	87993178	chr14:87934680-87993178	1	-	87934731	87993164	789624	16	198,77,164,181,151,87,90,128,125,156,131,39,140,114,64,209,	0,5224,6714,10872,13047,15164,15978,28703,30824,33654,41677,47524,49713,51808,53463,58289,
#Partially deleted in new
chr14	87934771	87949899	chr14:87934771-87949899	0	-	87941547	87949899	789624	5	107,77,164,151,55,	0,5133,6623,12956,15073,
#Partially deleted in new
chr14	87941394	87993170	chr14:87941394-87993170	0	-	87981432	87993164	789624	16	164,181,151,87,90,128,125,156,131,34,39,140,114,64,69,201,	0,4158,6333,8450,9264,21989,24110,26940,34963,40019,40810,42999,45094,46749,47060,51575,
#Deleted in new
chr14	87952526	87955203	chr14:87952526-87955203	7	+	87952526	87952526	16724991	2	1925,545,	0,2132,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	87959552	87965623	chr14:87959552-87965623	0	-	87959552	87959552	8553170	3	161,128,119,	0,3831,5952,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	87963271	87993154	chr14:87963271-87993154	0	-	87963271	87963271	8553170	10	240,125,156,131,39,140,114,64,69,185,	0,2233,5063,13086,18933,21122,23217,24872,25183,29698,
#Partially deleted in new
chr14	87963313	87993154	chr14:87963313-87993154	0	-	87963320	87993154	789624	10	198,125,156,131,39,140,114,64,69,185,	0,2191,5021,13044,18891,21080,23175,24830,25141,29656,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	87968392	87976864	chr14:87968392-87976864	0	-	87968392	87968392	8553170	2	98,507,	0,7965,
#Partially deleted in new
chr14	87976357	87989647	chr14:87976357-87989647	0	-	87976357	87976357	8553170	7	131,39,140,114,64,69,74,	0,5847,8036,10131,11786,12097,13216,
#Partially deleted in new
chr14	87981202	87988172	chr14:87981202-87988172	0	-	87981202	87981202	8553170	5	245,39,140,114,29,	0,1002,3191,5286,6941,
#Partially deleted in new
chr14	87982204	87993172	chr14:87982204-87993172	0	-	87987045	87993164	789624	7	39,140,114,88,64,69,203,	0,2189,4284,4764,5939,6250,10765,
#Partially deleted in new
chr14	87984440	87993122	chr14:87984440-87993122	0	-	87992369	87993122	789624	6	93,114,64,69,102,153,	0,2048,3703,4014,7863,8529,
#Deleted in new
chr14	87987751	87988523	chr14:87987751-87988523	0	-	87987751	87987751	8553170	2	456,69,	0,703,
#Deleted in new
chr14	87996344	87996448	chr14:87996344-87996448	3	-	87996344	87996344	8553170	1	104,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	88005123	88014811	chr14:88005123-88014811	3	+	88010847	88011861	789624	2	99,4423,	0,5265,
#Partially deleted in new
chr14	88010786	88015611	chr14:88010786-88015611	3	-	88010786	88010786	8553170	3	181,55,95,	0,378,4730,
#Partially deleted in new
chr14	88018604	88036319	chr14:88018604-88036319	3	-	88018604	88018604	8553170	5	99,91,145,91,41,	0,5070,7483,15987,17674,
#Partially deleted in new
chr14	88018604	88026312	chr14:88018604-88026312	0	-	88018604	88018604	789624	3	99,102,225,	0,5070,7483,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	88024608	88097619	chr14:88024608-88097619	0	+	88024608	88024608	8553170	2	61,1121,	0,71890,
#Partially deleted in new
chr14	88036936	88048139	chr14:88036936-88048139	1	+	88036936	88036936	8553170	4	143,89,234,82,	0,414,7678,11121,
#Partially deleted in new
chr14	88044727	88093165	chr14:88044727-88093165	0	+	88044727	88044727	8553170	3	121,265,39,	0,34376,48399,
#Partially deleted in new
chr14	88136732	88159845	chr14:88136732-88159845	3	-	88136732	88136732	8553170	3	210,91,127,	0,1242,22986,
#Deleted in new
chr14	88158239	88160591	chr14:88158239-88160591	3	-	88158239	88158239	8553170	1	2352,	0,
#Partially deleted in new
chr14	88175390	88180198	chr14:88175390-88180198	3	+	88175390	88175390	8553170	3	91,81,301,	0,1681,4507,
#Partially deleted in new
chr14	88177132	88180198	chr14:88177132-88180198	1	+	88177132	88177132	8553170	3	20,135,301,	0,1334,2765,
#Partially deleted in new
chr14	88180102	88326907	chr14:88180102-88326907	1	-	88185534	88326455	0	7	6053,143,187,161,118,350,489,	0,7864,12121,47272,60600,83099,146316,
#Partially deleted in new
chr14	88184892	88270911	chr14:88184892-88270911	3	-	88185534	88270789	0	7	1263,143,187,161,118,350,174,	0,3074,7331,42482,55810,78309,85845,
#Partially deleted in new
chr14	88184892	88323249	chr14:88184892-88323249	1	-	88185534	88322798	0	7	1263,143,187,161,118,350,503,	0,3074,7331,42482,55810,78309,137854,
#Partially deleted in new
chr14	88240701	88323725	chr14:88240701-88323725	0	-	88240701	88323647	789624	3	119,350,79,	0,22500,82945,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	88384923	88438460	chr14:88384923-88438460	1	+	88385818	88438422	789624	12	138,440,75,48,134,473,67,116,54,78,55,623,	0,474,6457,11232,31787,41308,42706,44424,46248,48211,52619,52914,
#Partially deleted in new
chr14	88385529	88438456	chr14:88385529-88438456	3	+	88385818	88438422	789624	12	308,75,96,48,134,473,67,116,54,78,55,619,	0,5851,7863,10626,31181,40702,42100,43818,45642,47605,52013,52308,
#Partially deleted in new
chr14	88385637	88416844	chr14:88385637-88416844	0	+	88385818	88385959	789624	4	394,75,48,134,	0,5743,10518,31073,
#Partially deleted in new
chr14	88385667	88438458	chr14:88385667-88438458	1	+	88385818	88438422	789624	11	170,75,48,134,473,67,116,54,78,55,621,	0,5713,10488,31043,40564,41962,43680,45504,47467,51875,52170,
#Partially deleted in new
chr14	88385672	88396203	chr14:88385672-88396203	0	+	88385818	88391632	789624	5	165,75,161,96,48,	0,5708,5925,7720,10483,
#Partially deleted in new
chr14	88385672	88396193	chr14:88385672-88396193	0	+	88385818	88385959	789624	4	359,75,96,38,	0,5708,7720,10483,
#Partially deleted in new
chr14	88385689	88426446	chr14:88385689-88426446	0	+	88385818	88426446	789624	4	148,48,134,215,	0,10466,31021,40542,
#Partially deleted in new
chr14	88385690	88438453	chr14:88385690-88438453	0	+	88385690	88385690	8553170	11	147,75,96,48,134,473,1834,54,78,55,616,	0,5690,7702,10465,31020,40541,41939,45481,47444,51852,52147,
#Partially deleted in new
chr14	88385699	88393636	chr14:88385699-88393636	0	+	88385699	88385699	8553170	3	138,75,244,	0,5681,7693,
#Partially deleted in new
chr14	88385738	88426602	chr14:88385738-88426602	0	+	88385818	88416752	789624	6	99,75,96,29,134,371,	0,5642,7654,10417,30972,40493,
#Partially deleted in new
chr14	88385818	88438455	chr14:88385818-88438455	1	+	88385818	88438422	789624	13	19,75,96,48,134,473,67,116,54,78,55,66,129,	0,5562,7574,10337,30892,40413,41811,43529,45353,47316,51724,52019,52508,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	88415925	88438455	chr14:88415925-88438455	0	+	88415925	88415925	8553170	8	919,473,67,116,54,78,55,618,	0,10306,11704,13422,15246,17209,21617,21912,
#Partially deleted in new
chr14	88431170	88470350	chr14:88431170-88470350	0	+	88431170	88469867	789624	5	55,78,55,66,504,	0,1964,6372,6667,38676,
#Partially deleted in new
chr14	88432622	88438077	chr14:88432622-88438077	0	+	88432622	88432622	8553170	3	590,55,240,	0,4920,5215,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	88433156	88455283	chr14:88433156-88455283	0	+	88433156	88455113	789624	4	56,55,66,224,	0,4386,4681,21903,
#Partially deleted in new
chr14	88465777	88550622	chr14:88465777-88550622	1	-	88468136	88550417	789624	18	2488,161,235,129,222,138,1433,85,61,80,88,89,88,71,68,98,170,385,	0,3138,3721,4144,6466,7887,13142,19298,20004,30635,31425,35005,35503,38647,39526,42145,51314,84460,
#Partially deleted in new
chr14	88465780	88554733	chr14:88465780-88554733	3	-	88468136	88550417	789624	19	2485,161,235,129,222,138,1433,85,61,80,88,89,88,71,68,98,170,382,83,	0,3135,3718,4141,6463,7884,13139,19295,20001,30632,31422,35002,35500,38644,39523,42142,51311,84457,88870,
#Deleted in new
chr14	88467769	88469616	chr14:88467769-88469616	0	-	88468086	88469616	789624	3	496,90,118,	0,1217,1729,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr14	88467954	88550530	chr14:88467954-88550530	0	-	88547645	88550417	789624	19	311,161,235,129,222,138,1433,85,61,80,88,89,88,71,68,98,170,123,293,	0,961,1544,1967,4289,5710,10965,17121,17827,28458,29248,32828,33326,36470,37349,39968,49137,79574,82283,
#Partially deleted in new
chr14	88467954	88550530	chr14:88467954-88550530	0	-	88467954	88467954	8553170	17	311,161,552,222,138,1433,85,61,80,88,89,88,71,68,98,170,293,	0,961,1544,4289,5710,10965,17121,17827,28458,29248,32828,33326,36470,37349,39968,49137,82283,
#Partially deleted in new
chr14	88469964	88473932	chr14:88469964-88473932	0	-	88469964	88469964	8553170	3	86,222,268,	0,2279,3700,
#Partially deleted in new
chr14	88492899	88551489	chr14:88492899-88551489	0	-	88492899	88492899	8553170	11	259,80,88,89,88,71,68,98,170,382,178,	0,3513,4303,7883,8381,11525,12404,15023,24192,57338,58412,
#Partially deleted in new
chr14	88499333	88515502	chr14:88499333-88515502	3	+	88499333	88499333	8553170	5	56,207,52,76,514,	0,1491,4543,14576,15655,
#Partially deleted in new
chr14	88504424	88551460	chr14:88504424-88551460	0	-	88504424	88550417	789624	6	71,68,98,170,382,225,	0,879,3498,12667,45813,46811,
#Partially deleted in new
chr14	88512317	88550619	chr14:88512317-88550619	0	-	88512317	88512317	8553170	3	270,170,382,	0,4774,37920,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	88513497	88513663	chr14:88513497-88513663	3	+	88513497	88513497	8553170	1	166,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	88551596	88552493	chr14:88551596-88552493	3	+	88551596	88551596	8553170	2	223,495,	0,402,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr14	88562908	88627596	chr14:88562908-88627596	3	+	88563133	88611751	789624	17	261,43,115,41,196,430,161,101,156,75,160,233,121,137,92,107,15852,	0,742,5130,8175,9121,9669,11784,12931,15076,33825,39015,39919,44334,46358,46803,47925,48836,
#Partially deleted in new
chr14	88562969	88612407	chr14:88562969-88612407	1	+	88563133	88611751	789624	14	200,43,115,41,196,430,161,101,156,121,137,89,107,663,	0,681,5069,8114,9060,9608,11723,12870,15015,44273,46297,46745,47864,48775,
#Partially deleted in new
chr14	88562981	88572113	chr14:88562981-88572113	0	+	88568061	88572113	789624	5	188,43,296,41,84,	0,669,4876,8102,9048,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr14	88563006	88615400	chr14:88563006-88615400	0	+	88563133	88573742	8553170	19	163,43,115,41,196,430,148,56,161,101,156,75,160,233,121,137,89,107,3656,	0,644,5032,8077,9023,9571,10604,11284,11686,12833,14978,33727,38917,39821,44236,46260,46708,47827,48738,
#Partially deleted in new
chr14	88563007	88572638	chr14:88563007-88572638	0	+	88563133	88572030	789624	5	162,43,115,196,61,	0,643,5031,9022,9570,
#Partially deleted in new
chr14	88563009	88611884	chr14:88563009-88611884	1	+	88563133	88611751	789624	15	160,43,115,41,196,430,161,101,156,75,121,137,92,107,140,	0,641,5029,8074,9020,9568,11683,12830,14975,33724,44233,46257,46702,47824,48735,
#Partially deleted in new
chr14	88563011	88572814	chr14:88563011-88572814	0	+	88567876	88572814	789624	7	158,43,59,115,41,196,237,	0,639,4846,5027,8072,9018,9566,
#Partially deleted in new
chr14	88563013	88612001	chr14:88563013-88612001	1	+	88572611	88611751	789624	13	156,43,41,196,430,161,101,156,121,137,77,107,257,	0,637,8070,9016,9564,11679,12826,14971,44229,46253,46713,47820,48731,
#Partially deleted in new
chr14	88563025	88572894	chr14:88563025-88572894	0	+	88568061	88572894	789624	5	144,115,41,196,317,	0,5013,8058,9004,9552,
#Partially deleted in new
chr14	88563037	88611991	chr14:88563037-88611991	1	+	88563133	88611751	789624	17	132,43,115,41,196,430,161,101,156,75,160,218,121,137,89,107,247,	0,613,5001,8046,8992,9540,11655,12802,14947,33696,38886,39790,44205,46229,46677,47796,48707,
#Partially deleted in new
chr14	88563133	88611810	chr14:88563133-88611810	1	+	88563133	88611751	789624	16	36,43,115,41,196,430,161,101,156,160,233,121,137,92,107,66,	0,517,4905,7950,8896,9444,11559,12706,14851,38790,39694,44109,46133,46578,47700,48611,
#Partially deleted in new
chr14	88563346	88611867	chr14:88563346-88611867	1	+	88568061	88611751	789624	15	109,43,115,41,196,430,161,101,156,75,121,137,92,107,123,	0,304,4692,7737,8683,9231,11346,12493,14638,33387,43896,45920,46365,47487,48398,
#Partially deleted in new
chr14	88563521	88572646	chr14:88563521-88572646	0	+	88568061	88572646	789624	5	172,115,41,196,69,	0,4517,7562,8508,9056,
#Partially deleted in new
chr14	88563600	88572179	chr14:88563600-88572179	0	+	88568061	88572179	789624	4	93,296,41,150,	0,4257,7483,8429,
#Partially deleted in new
chr14	88572047	88611888	chr14:88572047-88611888	0	+	88572047	88611751	789624	13	178,430,161,101,156,75,160,233,121,137,89,107,144,	0,530,2645,3792,5937,24686,29876,30780,35195,37219,37667,38786,39697,
#Partially deleted in new
chr14	88574788	88602009	chr14:88574788-88602009	0	+	88574788	88578072	789624	4	65,101,148,86,	0,1051,3204,27135,
#Partially deleted in new
chr14	88574812	88586735	chr14:88574812-88586735	0	+	88574812	88586719	789624	4	41,101,156,165,	0,1027,3172,11758,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	88589230	88592408	chr14:88589230-88592408	3	+	88589230	88589230	8553170	1	3178,	0,
#Partially deleted in new
chr14	88594398	88611886	chr14:88594398-88611886	1	+	88594726	88611751	789624	7	713,75,121,137,89,107,142,	0,2335,12844,14868,15316,16435,17346,
#Partially deleted in new
chr14	88594414	88611884	chr14:88594414-88611884	1	+	88594726	88611751	789624	9	697,75,160,233,121,137,92,107,140,	0,2319,7509,8413,12828,14852,15297,16419,17330,
#Partially deleted in new
chr14	88594434	88611951	chr14:88594434-88611951	1	+	88594726	88611751	789624	6	677,121,137,92,107,207,	0,12808,14832,15277,16399,17310,
#Partially deleted in new
chr14	88594436	88602900	chr14:88594436-88602900	0	+	88594726	88602900	789624	3	675,160,73,	0,7487,8391,
#Partially deleted in new
chr14	88602034	88611890	chr14:88602034-88611890	0	+	88602034	88602034	8553170	6	49,233,121,537,107,146,	0,793,5208,7232,8799,9710,
#Partially deleted in new
chr14	88607283	88611872	chr14:88607283-88611872	0	+	88607283	88611751	789624	5	80,137,125,107,128,	0,1983,2395,3550,4461,
#Partially deleted in new
chr14	88608111	88611883	chr14:88608111-88611883	0	+	88608111	88608111	8553170	5	30,137,89,107,139,	0,1155,1603,2722,3633,
#Partially deleted in new
chr14	88608421	88612979	chr14:88608421-88612979	0	+	88608421	88608421	8553170	3	1382,107,1235,	0,2412,3323,
#Partially deleted in new
chr14	88612430	88792752	chr14:88612430-88792752	3	-	88615817	88792503	789624	44	3424,101,154,104,163,173,189,115,158,209,174,21,99,130,79,9,15,127,202,177,89,132,153,142,128,112,203,101,94,106,187,119,107,168,213,257,138,202,136,186,69,99,160,446,	0,3711,4295,5797,6219,8323,8682,10173,12539,14407,15215,22038,26378,30462,32002,34516,37481,44945,45756,49223,50600,52062,52906,69459,72584,74785,75840,81876,82930,84416,90015,92429,93051,93828,99840,102508,114110,123933,126448,127956,131592,133754,142081,179876,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	88613720	88619712	chr14:88613720-88619712	0	-	88613720	88613720	8553170	5	2134,101,154,104,1063,	0,2421,3005,4507,4929,
#Partially deleted in new
chr14	88614870	88665361	chr14:88614870-88665361	0	-	88663088	88665361	789624	21	984,101,154,104,163,173,189,115,158,209,174,21,99,130,79,127,202,177,84,132,25,	0,1271,1855,3357,3779,5883,6242,7733,10099,11967,12775,19598,23938,28022,29562,42505,43316,46783,48160,49622,50466,
#Partially deleted in new
chr14	88615817	88792503	chr14:88615817-88792503	1	-	88615817	88792503	789624	42	37,101,154,104,163,173,189,115,158,209,174,21,99,130,79,127,202,177,89,132,153,142,128,112,203,101,94,106,187,119,107,168,213,257,138,202,136,186,69,99,160,197,	0,324,908,2410,2832,4936,5295,6786,9152,11020,11828,18651,22991,27075,28615,41558,42369,45836,47213,48675,49519,66072,69197,71398,72453,78489,79543,81029,86628,89042,89664,90441,96453,99121,110723,120546,123061,124569,128205,130367,138694,176489,
#Partially deleted in new
chr14	88618647	88626900	chr14:88618647-88626900	0	-	88618647	88626900	789624	6	75,170,189,115,158,63,	0,2106,2465,3956,6322,8190,
#Partially deleted in new
chr14	88621209	88626941	chr14:88621209-88626941	0	-	88621209	88621209	8553170	3	92,158,104,	0,3760,5628,
#Partially deleted in new
chr14	88621756	88715130	chr14:88621756-88715130	0	-	88705829	88715130	789624	29	148,115,158,209,174,21,99,130,79,127,202,177,89,132,153,142,128,112,89,101,94,106,187,119,107,154,168,213,192,	0,847,3213,5081,5889,12712,17052,21136,22676,35619,36430,39897,41274,42736,43580,60133,63258,65459,66514,72550,73604,75090,80689,83103,83725,83963,84502,90514,93182,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	88627747	88644737	chr14:88627747-88644737	0	-	88627747	88627747	8553170	5	72,21,99,130,305,	0,6721,11061,15145,16685,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	88819607	88822151	chr14:88819607-88822151	3	-	88819607	88819607	8553170	1	2544,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	88820296	88820432	chr14:88820296-88820432	3	+	88820296	88820296	8553170	1	136,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr14	88824152	88877995	chr14:88824152-88877995	1	+	88824707	88877410	789624	16	62,248,30,121,64,160,90,45,86,88,111,140,175,123,84,702,	0,421,9540,15299,16712,16884,17272,19653,28818,33037,37069,45906,47396,48177,50873,53141,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	88824152	88877995	chr14:88824152-88877995	1	+	88841527	88877410	789624	14	62,248,121,64,160,133,86,88,111,140,175,123,84,702,	0,421,15299,16712,16884,17272,28818,33037,37069,45906,47396,48177,50873,53141,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	88824152	88877995	chr14:88824152-88877995	1	+	88824707	88877410	789624	14	62,248,121,64,160,45,86,88,111,140,175,123,84,702,	0,421,15299,16712,16884,19653,28818,33037,37069,45906,47396,48177,50873,53141,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr14	88824152	88877995	chr14:88824152-88877995	1	+	88824707	88877410	789624	16	62,248,121,64,160,90,45,78,86,88,111,140,175,123,84,702,	0,421,15299,16712,16884,17272,19653,22445,28818,33037,37069,45906,47396,48177,50873,53141,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	88824593	88834006	chr14:88824593-88834006	0	+	88824707	88830887	789624	3	228,160,91,	0,6282,9322,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	88824623	88881078	chr14:88824623-88881078	3	+	88824707	88877410	789624	14	198,121,64,160,90,45,86,88,111,140,175,123,84,3785,	0,14828,16241,16413,16801,19182,28347,32566,36598,45435,46925,47706,50402,52670,
#Partially deleted in new
chr14	88824650	88853034	chr14:88824650-88853034	0	+	88824650	88824650	8553170	6	171,121,64,478,45,64,	0,14801,16214,16386,19155,28320,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr14	88824655	88877988	chr14:88824655-88877988	1	+	88824707	88877410	789624	15	166,121,64,160,90,45,78,86,88,111,140,175,123,84,695,	0,14796,16209,16381,16769,19150,21942,28315,32534,36566,45403,46893,47674,50370,52638,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr14	88824655	88877988	chr14:88824655-88877988	1	+	88824707	88877410	789624	13	166,121,64,160,45,86,88,111,140,175,123,84,695,	0,14796,16209,16381,19150,28315,32534,36566,45403,46893,47674,50370,52638,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	88824659	88877951	chr14:88824659-88877951	1	+	88824707	88877410	789624	6	162,140,175,123,84,658,	0,45399,46889,47670,50366,52634,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr14	88824661	88877987	chr14:88824661-88877987	1	+	88824707	88877410	789624	15	160,30,121,64,160,90,45,86,88,111,140,175,123,84,694,	0,9031,14790,16203,16375,16763,19144,28309,32528,36560,45397,46887,47668,50364,52632,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr14	88824671	88877971	chr14:88824671-88877971	0	+	88824707	88841526	789624	13	150,121,64,160,133,86,88,111,140,175,123,84,678,	0,14780,16193,16365,16753,28299,32518,36550,45387,46877,47658,50354,52622,
#Partially deleted in new
chr14	88824684	88852997	chr14:88824684-88852997	0	+	88824707	88852997	789624	6	137,121,64,160,90,27,	0,14767,16180,16352,16740,28286,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	88824738	88877956	chr14:88824738-88877956	0	+	88824738	88877410	789624	12	83,121,64,160,45,86,88,111,140,175,123,663,	0,14713,16126,16298,19067,28232,32451,36483,45320,46810,47591,52555,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	88840164	88840263	chr14:88840164-88840263	3	+	88840164	88840164	8553170	1	99,	0,
#Partially deleted in new
chr14	88840838	88857265	chr14:88840838-88857265	0	+	88840838	88840838	8553170	7	90,160,90,45,60,86,76,	0,198,586,2967,6009,12132,16351,
#Partially deleted in new
chr14	88841484	88875107	chr14:88841484-88875107	0	+	88841484	88875107	789624	8	30,45,88,111,140,175,123,82,	0,2321,15705,19737,28574,30064,30845,33541,
#Partially deleted in new
chr14	89013385	89025807	chr14:89013385-89025807	3	+	89013385	89013385	8553170	2	174,316,	0,12106,
#Deleted in new
chr14	89110147	89111223	chr14:89110147-89111223	7	-	89110147	89110147	16724991	1	1076,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	89124870	89180744	chr14:89124870-89180744	0	-	89125143	89180744	789624	3	356,113,44,	0,457,55830,
#Partially deleted in new
chr14	89156171	89619130	chr14:89156171-89619130	1	-	89162413	89412476	789624	7	6798,106,66,65,137,557,103,	0,24529,34212,124778,194500,255762,462856,
#Deleted in new
chr14	89156742	89157574	chr14:89156742-89157574	3	+	89156742	89156742	8553170	1	832,	0,
#Partially deleted in new
chr14	89161360	89412492	chr14:89161360-89412492	1	-	89162413	89412476	789624	6	1609,106,66,65,137,559,	0,19340,29023,119589,189311,250573,
#Partially deleted in new
chr14	89161384	89417112	chr14:89161384-89417112	1	-	89162413	89412476	789624	6	1585,106,65,137,557,242,	0,19316,119565,189287,250549,255486,
#Partially deleted in new
chr14	89161399	89412476	chr14:89161399-89412476	1	-	89162413	89412476	789624	5	1570,106,65,137,543,	0,19301,119550,189272,250534,
#Partially deleted in new
chr14	89162361	89619149	chr14:89162361-89619149	3	-	89162413	89412476	789624	6	608,106,65,137,557,122,	0,18339,118588,188310,249572,456666,
#Partially deleted in new
chr14	89162877	89412025	chr14:89162877-89412025	0	-	89162877	89412025	789624	6	92,106,63,65,137,92,	0,17823,27509,118072,187794,249056,
#Deleted in new
chr14	89180755	89185873	chr14:89180755-89185873	0	-	89180755	89180755	8553170	2	51,337,	0,4781,
#Partially deleted in new
chr14	89180758	89223342	chr14:89180758-89223342	0	-	89180758	89180758	8553170	3	48,66,226,	0,9625,42358,
#Deleted in new
chr14	89180787	89184154	chr14:89180787-89184154	0	-	89180787	89180787	8553170	2	19,209,	0,3158,
#Partially deleted in new
chr14	89180789	89412017	chr14:89180789-89412017	0	-	89284512	89412017	789624	5	17,65,95,137,84,	0,100160,103638,169882,231144,
#Partially deleted in new
chr14	89190381	89401665	chr14:89190381-89401665	0	-	89190381	89401665	789624	4	68,65,137,96,	0,90568,160290,211188,
#Partially deleted in new
chr14	89230727	89412058	chr14:89230727-89412058	0	-	89230859	89412058	789624	4	140,65,137,125,	0,50222,119944,181206,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	89263592	89350791	chr14:89263592-89350791	0	-	89263592	89263592	8553170	3	463,65,120,	0,17357,87079,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	89280949	89412035	chr14:89280949-89412035	0	-	89333222	89412035	789624	4	65,146,137,102,	0,52164,69722,130984,
#Deleted in new
chr14	89290204	89291594	chr14:89290204-89291594	7	-	89290204	89290204	16724991	1	1390,	0,
#Deleted in new
chr14	89349532	89351321	chr14:89349532-89351321	0	-	89349532	89349532	8553170	3	229,137,259,	0,1139,1530,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	89350284	89353793	chr14:89350284-89353793	1	+	89350284	89350284	8553170	2	209,392,	0,3117,
#Partially deleted in new
chr14	89350301	89364699	chr14:89350301-89364699	3	+	89350301	89350301	8553170	2	192,306,	0,14092,
#Partially deleted in new
chr14	89350727	89619137	chr14:89350727-89619137	0	-	89350727	89412476	789624	4	81,557,103,110,	0,61206,135841,268300,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	89355059	89356571	chr14:89355059-89356571	3	+	89355059	89355059	8553170	2	213,245,	0,1267,
#Partially deleted in new
chr14	89399994	89409469	chr14:89399994-89409469	3	+	89399994	89399994	8553170	2	148,193,	0,9282,
#Partially deleted in new
chr14	89412196	89494051	chr14:89412196-89494051	0	-	89412196	89412476	789624	3	294,103,108,	0,74372,81747,
#Partially deleted in new
chr14	89412311	89954659	chr14:89412311-89954659	3	-	89412311	89412311	8553170	4	179,103,96,74,	0,74257,541594,542274,
#Partially deleted in new
chr14	89412312	89494185	chr14:89412312-89494185	0	-	89412312	89412476	789624	3	178,103,56,	0,74256,81817,
#Deleted in new
chr14	89417353	89419793	chr14:89417353-89419793	3	+	89417353	89417353	789624	2	443,634,	0,1806,
#Deleted in new
chr14	89576215	89577477	chr14:89576215-89577477	3	+	89576215	89576215	789624	1	1262,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	89621917	89622207	chr14:89621917-89622207	3	+	89621917	89621917	8553170	1	290,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	89628920	89631566	chr14:89628920-89631566	0	-	89628920	89628920	8553170	2	216,200,	0,2446,
#Partially deleted in new
chr14	89628920	89642671	chr14:89628920-89642671	3	-	89628920	89628920	8553170	2	216,204,	0,13547,
#Partially deleted in new
chr14	89628940	89634082	chr14:89628940-89634082	1	-	89628940	89628940	8553170	3	196,255,247,	0,4259,4895,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	89650792	89650903	chr14:89650792-89650903	3	-	89650792	89650792	8553170	1	111,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	89712510	89712823	chr14:89712510-89712823	3	+	89712510	89712510	8553170	1	313,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	89736964	89738391	chr14:89736964-89738391	7	-	89736964	89736964	16724991	2	335,755,	0,672,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	89794668	89954689	chr14:89794668-89954689	3	-	89797242	89954660	789624	6	2656,91,102,46,96,104,	0,136872,137857,155428,159237,159917,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	89795146	89954557	chr14:89795146-89954557	1	-	89797242	89954357	789624	6	2178,91,102,46,96,203,	0,136394,137379,154950,158759,159208,
#Partially deleted in new
chr14	89797126	89954001	chr14:89797126-89954001	0	-	89924658	89954001	789624	6	198,165,91,102,46,96,	0,127386,134414,135399,152970,156779,
#Partially deleted in new
chr14	89797136	89954777	chr14:89797136-89954777	1	-	89797242	89953932	789624	6	188,91,102,46,96,45,	0,134404,135389,152960,156769,157596,
#Partially deleted in new
chr14	89797156	89952605	chr14:89797156-89952605	0	-	89797156	89797156	8553170	5	168,91,102,46,217,	0,134384,135369,152940,155232,
#Partially deleted in new
chr14	89799172	89924627	chr14:89799172-89924627	0	-	89799172	89799172	8553170	2	334,115,	0,125340,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	89829830	89954730	chr14:89829830-89954730	0	-	89950123	89954660	789624	9	1386,101,237,126,91,102,42,96,145,	0,3246,6594,7189,101710,102695,120266,124075,124755,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	89831063	89954741	chr14:89831063-89954741	0	-	89831063	89831063	8553170	6	153,91,102,46,96,156,	0,100477,101462,119033,122842,123522,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	89848432	89932594	chr14:89848432-89932594	0	-	89848432	89848432	8553170	3	487,91,69,	0,83108,84093,
#Deleted in new
chr14	89892127	89892443	chr14:89892127-89892443	7	+	89892127	89892127	16724991	1	316,	0,
#Partially deleted in new
chr14	89923307	89954750	chr14:89923307-89954750	1	-	89924658	89954660	789624	6	1370,91,102,46,96,165,	0,8233,9218,26789,30598,31278,
#Partially deleted in new
chr14	89923325	89954523	chr14:89923325-89954523	1	-	89924658	89954357	789624	6	1352,91,102,46,96,169,	0,8215,9200,26771,30580,31029,
#Partially deleted in new
chr14	89931043	89952588	chr14:89931043-89952588	0	-	89931043	89931043	8553170	4	588,102,46,200,	0,1482,19053,21345,
#Partially deleted in new
chr14	89938006	89952540	chr14:89938006-89952540	0	-	89938006	89938006	8553170	3	161,46,152,	0,12090,14382,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr14	89954938	90043252	chr14:89954938-90043252	0	+	89963114	89964867	789624	18	739,223,566,88,44,56,97,35,140,168,79,186,49,67,108,103,109,183,	0,1639,8169,9912,11208,12428,16236,20842,25601,29577,30193,33966,34778,36978,38437,64377,78167,88131,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr14	89955901	90043341	chr14:89955901-90043341	1	+	89963114	90033185	789624	18	69,223,566,44,56,97,35,93,168,79,186,49,67,108,103,46,109,272,	0,676,7206,10245,11465,15273,19879,24638,28614,29230,33003,33815,36015,37474,63414,67130,77204,87168,
#Partially deleted in new
chr14	89955906	89980587	chr14:89955906-89980587	0	+	89963114	89980587	789624	7	64,566,44,56,97,35,48,	0,7201,10240,11460,15268,19874,24633,
#Partially deleted in new
chr14	89955937	90043344	chr14:89955937-90043344	1	+	89963114	90043143	0	16	33,566,44,56,97,35,93,168,79,186,49,67,108,103,109,275,	0,7170,10209,11429,15237,19843,24602,28578,29194,32967,33779,35979,37438,63378,77168,87132,
#Partially deleted in new
chr14	89955940	89984587	chr14:89955940-89984587	0	+	89963411	89984587	789624	8	30,449,44,56,97,35,93,72,	0,7284,10206,11426,15234,19840,24599,28575,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr14	89955950	90044768	chr14:89955950-90044768	3	+	89963114	90043143	0	17	20,223,566,44,56,97,35,93,168,79,186,49,67,108,103,109,1699,	0,627,7157,10196,11416,15224,19830,24589,28565,29181,32954,33766,35966,37425,63365,77155,87119,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	89955954	89980592	chr14:89955954-89980592	0	+	89955954	89955954	8553170	7	16,223,44,56,97,35,53,	0,623,10192,11412,15220,19826,24585,
#Partially deleted in new
chr14	89955992	89963569	chr14:89955992-89963569	0	+	89963114	89963569	789624	2	286,462,	0,7115,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	89956009	89957187	chr14:89956009-89957187	0	+	89956009	89956009	8553170	2	269,610,	0,568,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	89956036	89963552	chr14:89956036-89963552	0	+	89963114	89963552	789624	3	242,223,445,	0,541,7071,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	89956522	89963557	chr14:89956522-89963557	0	+	89963114	89963557	789624	2	278,450,	0,6585,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr14	89956564	90043341	chr14:89956564-90043341	0	+	89963114	89983126	789624	18	236,566,44,56,97,35,93,163,168,79,57,186,49,67,108,103,109,272,	0,6543,9582,10802,14610,19216,23975,26549,27951,28567,30421,32340,33152,35352,36811,62751,76541,86505,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr14	89956571	90043315	chr14:89956571-90043315	0	+	89963114	89980563	789624	15	229,566,44,56,97,93,168,79,186,49,67,108,103,109,246,	0,6536,9575,10795,14603,23968,27944,28560,32333,33145,35345,36804,62744,76534,86498,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	89958292	89963599	chr14:89958292-89963599	0	+	89963114	89963599	789624	2	105,492,	0,4815,
#Partially deleted in new
chr14	89963104	90043309	chr14:89963104-90043309	1	+	89963114	90043162	789624	14	569,44,56,97,35,93,168,79,186,49,67,108,103,240,	0,3042,4262,8070,12676,17435,21411,22027,25800,26612,28812,30271,56211,79965,
#Partially deleted in new
chr14	89975780	89983205	chr14:89975780-89983205	0	+	89975780	89981490	789624	4	35,93,98,92,	0,4759,5682,7333,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	89985158	90033616	chr14:89985158-90033616	0	+	89985158	90033384	789624	7	52,186,49,67,108,103,511,	0,3746,4558,6758,8217,34157,47947,
#Partially deleted in new
chr14	90061764	90185857	chr14:90061764-90185857	3	+	90062205	90185003	789624	2	775,1747,	0,122346,
#Deleted in new
chr14	90107674	90107995	chr14:90107674-90107995	7	+	90107674	90107674	16724991	1	321,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	90256494	90275429	chr14:90256494-90275429	3	+	90256597	90272407	0	11	106,54,97,125,186,129,97,190,152,155,3157,	0,2665,3620,6823,7167,7546,8575,11729,12902,13703,15778,
#Partially deleted in new
chr14	90256526	90268274	chr14:90256526-90268274	0	+	90264064	90268274	789624	5	66,47,129,97,51,	0,7274,7514,8543,11697,
#Partially deleted in new
chr14	90256527	90263670	chr14:90256527-90263670	0	+	90256527	90256527	8553170	4	73,54,97,353,	0,2632,3587,6790,
#Partially deleted in new
chr14	90256553	90263944	chr14:90256553-90263944	0	+	90256553	90256553	8553170	5	47,54,97,125,283,	0,2606,3561,6764,7108,
#Partially deleted in new
chr14	90256553	90263927	chr14:90256553-90263927	0	+	90256553	90256553	8553170	5	47,54,97,125,258,	0,2606,3561,6764,7116,
#Partially deleted in new
chr14	90256577	90272550	chr14:90256577-90272550	1	+	90263382	90272407	0	10	23,54,125,186,129,97,190,152,155,278,	0,2582,6740,7084,7463,8492,11646,12819,13620,15695,
#Partially deleted in new
chr14	90267475	90272624	chr14:90267475-90272624	0	+	90267475	90267475	8553170	3	938,956,352,	0,1921,4797,
#Duplicated in new
chr14	90267855	90332137	chr14:90267855-90332137	3	-	90278335	90331904	789624	14	10606,72,139,929,387,176,121,134,406,448,150,234,109,297,	0,11206,18498,20361,22365,24841,30404,33383,34864,36079,44538,48722,50149,63985,
#Partially deleted in new
chr14	90278053	90312516	chr14:90278053-90312516	0	-	90301261	90312516	789624	10	408,72,139,929,387,176,121,134,448,123,	0,1008,8300,10163,12167,14643,20206,23185,25881,34340,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	90278057	90281595	chr14:90278057-90281595	0	-	90278057	90278057	8553170	1	3538,	0,
#Partially deleted in new
chr14	90278059	90331910	chr14:90278059-90331910	0	-	90312475	90331904	789624	12	402,72,139,929,387,176,121,134,406,448,150,70,	0,1002,8294,10157,12161,14637,20200,23179,24660,25875,34334,53781,
#Deleted in new
chr14	90278060	90279283	chr14:90278060-90279283	0	-	90278060	90278060	8553170	2	401,222,	0,1001,
#Partially deleted in new
chr14	90278557	90288885	chr14:90278557-90288885	0	-	90278557	90278557	8553170	3	576,139,669,	0,7796,9659,
#Partially deleted in new
chr14	90290574	90302837	chr14:90290574-90302837	0	-	90290574	90302837	789624	6	33,176,121,134,30,118,	0,2122,7685,10664,11199,12145,
#Deleted in new
chr14	90303953	90304654	chr14:90303953-90304654	0	-	90303953	90303953	8553170	2	429,148,	0,553,
#Partially deleted in new
chr14	90312475	90331904	chr14:90312475-90331904	1	-	90312475	90331904	789624	2	68,64,	0,19365,
#Partially deleted in new
chr14	90316586	90331969	chr14:90316586-90331969	0	-	90316586	90316586	8553170	4	225,117,109,129,	0,1117,1418,15254,
#Deleted in new
chr14	90366696	90367179	chr14:90366696-90367179	7	-	90366696	90366696	16724991	1	483,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	90383364	90387973	chr14:90383364-90387973	3	+	90383364	90383364	8553170	1	4609,	0,
#Partially deleted in new
chr14	90396501	90404496	chr14:90396501-90404496	0	+	90401332	90404496	789624	5	157,31,144,107,118,	0,3563,4757,7360,7877,
#Partially deleted in new
chr14	90396982	90408261	chr14:90396982-90408261	3	+	90397230	90404717	0	6	251,31,144,107,136,3573,	0,3082,4276,6879,7396,7706,
#Partially deleted in new
chr14	90397028	90405072	chr14:90397028-90405072	1	+	90399081	90404717	789624	7	205,97,31,144,107,136,384,	0,1962,3036,4230,6833,7350,7660,
#Partially deleted in new
chr14	90397031	90404067	chr14:90397031-90404067	0	+	90397031	90397031	8553170	4	202,31,144,206,	0,3033,4227,6830,
#Deleted in new
chr14	90397031	90398803	chr14:90397031-90398803	0	+	90397031	90397031	8553170	2	202,352,	0,1420,
#Partially deleted in new
chr14	90397031	90401613	chr14:90397031-90401613	0	+	90397031	90397031	8553170	3	202,31,355,	0,3033,4227,
#Deleted in new
chr14	90397031	90400431	chr14:90397031-90400431	0	+	90397031	90397031	8553170	2	202,367,	0,3033,
#Partially deleted in new
chr14	90397031	90405607	chr14:90397031-90405607	1	+	90397230	90404717	789624	5	202,31,131,58,919,	0,3033,4227,7425,7657,
#Partially deleted in new
chr14	90397039	90405603	chr14:90397039-90405603	0	+	90397230	90404452	789624	5	194,31,144,136,915,	0,3025,4219,7339,7649,
#Partially deleted in new
chr14	90397055	90405048	chr14:90397055-90405048	1	+	90401332	90404717	789624	6	99,31,144,107,136,360,	0,3009,4203,6806,7323,7633,
#Partially deleted in new
chr14	90397931	90404807	chr14:90397931-90404807	0	+	90397931	90397931	8553170	5	2164,144,107,136,119,	0,3327,5930,6447,6757,
#Partially deleted in new
chr14	90398261	90405107	chr14:90398261-90405107	1	+	90401332	90404717	789624	6	227,31,144,107,136,419,	0,1803,2997,5600,6117,6427,
#Partially deleted in new
chr14	90399977	90404153	chr14:90399977-90404153	0	+	90399977	90399977	8553170	3	118,144,292,	0,1281,3884,
#Partially deleted in new
chr14	90401332	90404833	chr14:90401332-90404833	0	+	90401332	90404452	789624	4	70,107,116,145,	0,2529,3066,3356,
#Deleted in new
chr14	90402522	90405235	chr14:90402522-90405235	3	-	90402522	90402522	8553170	2	256,44,	0,2669,
#Deleted in new
chr14	90403631	90404746	chr14:90403631-90404746	0	+	90403631	90403631	8553170	3	337,136,58,	0,747,1057,
#Deleted in new
chr14	90404167	90404785	chr14:90404167-90404785	0	+	90404167	90404167	8553170	2	347,97,	0,521,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	90452062	90455117	chr14:90452062-90455117	3	-	90452062	90452062	789624	3	251,154,21,	0,2688,3034,
#Partially deleted in new
chr14	90455229	90458866	chr14:90455229-90458866	3	+	90455229	90455229	789624	4	149,110,140,271,	0,1212,1789,3366,
#Partially deleted in new
chr14	90455270	90458904	chr14:90455270-90458904	1	+	90455270	90455270	8553170	3	1000,717,309,	0,1171,3325,
#Partially deleted in new
chr14	90455328	90458905	chr14:90455328-90458905	0	+	90455328	90455328	8553170	3	926,140,310,	0,1690,3267,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	90489009	90491614	chr14:90489009-90491614	3	-	90489009	90489009	8553170	4	815,88,135,59,	0,1305,2172,2546,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	90489011	90491637	chr14:90489011-90491637	0	-	90489011	90489011	8553170	1	2626,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr14	90524563	90816417	chr14:90524563-90816417	3	-	90541367	90816295	0	20	17026,203,141,98,117,161,73,58,118,105,84,138,64,173,79,122,131,169,155,243,	0,53542,68922,86178,93365,119484,122387,128277,130429,132610,133740,151959,155908,164976,170936,205511,220228,256174,261610,291611,
#Partially deleted in new
chr14	90540587	90689712	chr14:90540587-90689712	0	-	90602135	90689712	789624	15	1002,203,141,195,98,117,161,73,58,118,105,84,138,64,173,	0,37518,52898,61418,70154,77341,103460,106363,112253,114405,116586,117716,135935,139884,148952,
#Partially deleted in new
chr14	90540641	90644208	chr14:90540641-90644208	0	-	90541367	90644208	789624	7	948,203,141,51,98,117,161,	0,37464,52844,62611,70100,77287,103406,
#Partially deleted in new
chr14	90540641	90644944	chr14:90540641-90644944	0	-	90540641	90540641	8553170	8	948,203,141,51,98,117,161,128,	0,37464,52844,62611,70100,77287,103406,104175,
#Partially deleted in new
chr14	90541185	90618023	chr14:90541185-90618023	0	-	90541281	90618023	789624	4	404,141,98,95,	0,52300,69556,76743,
#Partially deleted in new
chr14	90541317	90610776	chr14:90541317-90610776	0	-	90541367	90610776	789624	6	272,203,141,51,162,35,	0,36788,52168,61935,64279,69424,
#Deleted in new
chr14	90567494	90569976	chr14:90567494-90569976	3	+	90567494	90567494	8553170	2	224,335,	0,2147,
#Partially deleted in new
chr14	90578105	90585799	chr14:90578105-90585799	0	-	90578105	90578105	8553170	2	203,184,	0,7510,
#Partially deleted in new
chr14	90578184	90593931	chr14:90578184-90593931	0	-	90578184	90578184	8553170	2	124,446,	0,15301,
#Partially deleted in new
chr14	90610793	90680527	chr14:90610793-90680527	0	-	90644158	90680527	789624	6	46,117,161,73,138,56,	0,7135,33254,36157,65729,69678,
#Partially deleted in new
chr14	90642637	90645135	chr14:90642637-90645135	0	+	90642637	90642637	8553170	2	93,392,	0,2106,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	90642639	90648894	chr14:90642639-90648894	3	+	90642639	90642639	789624	5	91,255,210,158,523,	0,2104,4131,4614,5732,
#Partially deleted in new
chr14	90644047	90658018	chr14:90644047-90658018	0	-	90644047	90644047	8553170	6	161,73,58,118,105,170,	0,2903,8793,10945,13126,13801,
#Partially deleted in new
chr14	90646947	90657447	chr14:90646947-90657447	0	-	90646947	90646947	8553170	4	76,58,118,274,	0,5893,8045,10226,
#Partially deleted in new
chr14	90652840	90677845	chr14:90652840-90677845	0	-	90652840	90677845	789624	6	58,118,105,84,138,22,	0,2152,4333,5463,23682,24983,
#Deleted in new
chr14	90675117	90676294	chr14:90675117-90676294	3	+	90675117	90675117	8553170	2	110,429,	0,748,
#Partially deleted in new
chr14	90689635	90786237	chr14:90689635-90786237	0	-	90689635	90780876	789624	7	77,79,66,122,131,169,64,	0,5864,9522,40439,55156,91102,96538,
#Deleted in new
chr14	90697332	90699374	chr14:90697332-90699374	3	+	90697332	90697332	789624	2	332,1622,	0,420,
#Partially deleted in new
chr14	90744917	90816479	chr14:90744917-90816479	0	-	90744917	90780876	789624	4	5,165,155,305,	0,35820,41256,71257,
#Partially deleted in new
chr14	90766530	90766989	chr14:90766530-90766989	7	+	90766530	90766530	16724991	1	459,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	90772649	90780796	chr14:90772649-90780796	0	-	90772649	90772649	8553170	2	293,59,	0,8088,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr14	90847861	91060608	chr14:90847861-91060608	3	-	90872073	91060434	0	17	24461,164,160,192,171,94,134,126,162,151,104,84,108,116,219,72,277,	0,25770,27339,42625,46551,51467,52246,52749,54946,58287,72344,75251,95216,99573,130444,153226,212470,
#Partially deleted in new
chr14	90871503	91060134	chr14:90871503-91060134	1	-	90872073	90978462	0	17	819,164,160,192,171,94,134,126,162,151,104,84,108,116,219,72,117,	0,2128,3697,18983,22909,27825,28604,29107,31304,34645,48702,51609,71574,75931,106802,129584,188514,
#Partially deleted in new
chr14	90872073	90978524	chr14:90872073-90978524	0	-	90943165	90978524	789624	14	249,164,160,192,171,94,134,126,162,151,104,84,108,219,	0,1558,3127,18413,22339,27255,28034,28537,30734,34075,48132,51039,71004,106232,
#Partially deleted in new
chr14	90893973	91060600	chr14:90893973-91060600	1	-	90894406	91060434	0	13	610,94,134,126,162,151,104,84,108,116,219,72,269,	0,5355,6134,6637,8834,12175,26232,29139,49104,53461,84332,107114,166358,
#Partially deleted in new
chr14	90900674	91060636	chr14:90900674-91060636	0	-	90923191	91060434	789624	10	62,162,151,104,121,108,116,219,72,305,	0,2133,5474,19531,22438,42403,46760,77631,100413,159657,
#Partially deleted in new
chr14	90906191	90911469	chr14:90906191-90911469	0	-	90906191	90906191	8553170	2	108,170,	0,5108,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	90978394	91060585	chr14:90978394-91060585	0	-	91001150	91060434	789624	4	130,72,140,254,	0,22693,73928,81937,
#Partially deleted in new
chr14	91060332	91170201	chr14:91060332-91170201	0	+	91160294	91170201	789624	5	372,52,132,154,199,	0,97306,99933,106892,109670,
#Partially deleted in new
chr14	91060831	91167378	chr14:91060831-91167378	0	+	91160294	91167378	789624	6	49,93,78,52,132,154,	0,84389,86949,96807,99434,106393,
#Deleted in new
chr14	91091076	91091138	chr14:91091076-91091138	3	+	91091076	91091076	8553170	1	62,	0,
#Partially deleted in new
chr14	91107985	91170072	chr14:91107985-91170072	0	+	91160294	91170072	789624	5	76,52,132,154,70,	0,49653,52280,59239,62017,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	91114062	91225632	chr14:91114062-91225632	1	+	91160294	91224833	789624	14	221,52,132,154,199,151,123,204,261,100,149,120,152,949,	0,43576,46203,53162,55940,59226,61871,67123,74847,82312,85694,90643,101342,110621,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr14	91114062	91225352	chr14:91114062-91225352	1	+	91160294	91224833	789624	15	221,93,78,52,132,154,184,115,123,204,261,100,149,152,669,	0,31158,33718,43576,46203,53162,55940,59226,61871,67123,74847,82312,85694,101342,110621,
#Partially deleted in new
chr14	91114062	91160369	chr14:91114062-91160369	0	+	91160294	91160369	789624	3	466,52,104,	0,43576,46203,
#Partially deleted in new
chr14	91114064	91167278	chr14:91114064-91167278	0	+	91160294	91167278	789624	5	219,93,52,132,54,	0,31156,43574,46201,53160,
#Partially deleted in new
chr14	91114066	91173439	chr14:91114066-91173439	0	+	91160294	91173439	789624	5	217,132,154,199,151,	0,46199,53158,55936,59222,
#Partially deleted in new
chr14	91114079	91173436	chr14:91114079-91173436	0	+	91160294	91173436	789624	8	204,93,78,52,132,154,199,148,	0,31141,33701,43559,46186,53145,55923,59209,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr14	91114084	91225355	chr14:91114084-91225355	1	+	91160294	91224833	789624	15	199,93,78,52,132,154,199,151,123,204,261,100,149,152,672,	0,31136,33696,43554,46181,53140,55918,59204,61849,67101,74825,82290,85672,101320,110599,
#Partially deleted in new
chr14	91114086	91167721	chr14:91114086-91167721	1	+	91160294	91167691	789624	7	197,93,78,52,132,154,253,	0,31134,33694,43552,46179,53138,53382,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	91114098	91189002	chr14:91114098-91189002	0	+	91160294	91173346	789624	8	185,132,154,151,123,204,106,93,	0,46167,53126,59190,61835,67087,71371,74811,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr14	91114119	91225355	chr14:91114119-91225355	0	+	91160294	91165257	789624	16	164,52,132,91,154,199,151,90,123,204,261,100,149,120,152,672,	0,43519,46146,51127,53105,55883,59169,59544,61814,67066,74790,82255,85637,90586,101285,110564,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr14	91114369	91225352	chr14:91114369-91225352	1	+	91160294	91224833	789624	17	159,93,78,279,52,132,154,199,151,123,204,261,100,149,120,152,669,	0,30851,33411,34204,43269,45896,52855,55633,58919,61564,66816,74540,82005,85387,90336,101035,110314,
#Partially deleted in new
chr14	91114375	91181249	chr14:91114375-91181249	0	+	91114375	91114375	8553170	5	153,52,132,154,64,	0,43263,45890,52849,66810,
#Partially deleted in new
chr14	91114387	91167707	chr14:91114387-91167707	1	+	91160294	91167551	789624	7	141,93,78,52,132,154,184,	0,30833,33393,43251,45878,52837,53136,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr14	91114389	91225355	chr14:91114389-91225355	3	+	91160294	91224833	789624	16	139,93,78,52,132,154,184,151,123,204,261,100,149,120,152,672,	0,30831,33391,43249,45876,52835,55613,58899,61544,66796,74520,81985,85367,90316,101015,110294,
#Partially deleted in new
chr14	91114400	91196474	chr14:91114400-91196474	0	+	91160294	91196474	789624	11	128,93,52,132,154,199,151,123,204,261,100,	0,30820,43238,45865,52824,55602,58888,61533,66785,74509,81974,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	91114441	91225352	chr14:91114441-91225352	1	+	91160294	91224833	789624	14	87,52,132,154,184,151,123,204,261,100,149,120,152,669,	0,43197,45824,52783,55561,58847,61492,66744,74468,81933,85315,90264,100963,110242,
#Partially deleted in new
chr14	91114448	91167315	chr14:91114448-91167315	0	+	91160294	91167315	789624	6	80,135,93,52,132,91,	0,14329,30772,43190,45817,52776,
#Partially deleted in new
chr14	91114669	91170201	chr14:91114669-91170201	0	+	91160294	91170201	789624	5	325,52,132,154,199,	0,42969,45596,52555,55333,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr14	91114685	91225355	chr14:91114685-91225355	1	+	91160294	91224833	789624	15	309,93,52,132,154,184,151,123,204,261,100,149,120,152,672,	0,30535,42953,45580,52539,55317,58603,61248,66500,74224,81689,85071,90020,100719,109998,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	91114699	91225355	chr14:91114699-91225355	1	+	91160294	91224833	789624	14	522,52,132,154,184,151,123,204,261,100,149,120,152,672,	0,42939,45566,52525,55303,58589,61234,66486,74210,81675,85057,90006,100705,109984,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	91125538	91170122	chr14:91125538-91170122	0	+	91160294	91170122	789624	5	86,52,132,154,120,	0,32100,34727,41686,44464,
#Partially deleted in new
chr14	91126424	91126553	chr14:91126424-91126553	3	+	91126424	91126424	789624	1	129,	0,
#Partially deleted in new
chr14	91147777	91167691	chr14:91147777-91167691	1	+	91160294	91167691	789624	5	81,52,132,154,223,	0,9861,12488,19447,19691,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	91147777	91225396	chr14:91147777-91225396	1	+	91160294	91224833	789624	14	81,52,132,154,199,151,123,204,261,100,149,120,152,713,	0,9861,12488,19447,22225,25511,28156,33408,41132,48597,51979,56928,67627,76906,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr14	91147777	91225396	chr14:91147777-91225396	1	+	91160294	91224833	789624	13	81,52,132,154,199,151,123,204,261,100,149,152,713,	0,9861,12488,19447,22225,25511,28156,33408,41132,48597,51979,67627,76906,
#Partially deleted in new
chr14	91157665	91167658	chr14:91157665-91167658	1	+	91160294	91167382	789624	3	25,132,434,	0,2600,9559,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr14	91160340	91225331	chr14:91160340-91225331	0	+	91160340	91223702	789624	13	57,154,199,151,123,204,261,100,149,120,152,117,648,	0,6884,9662,12948,15593,20845,28569,36034,39416,44365,55064,63338,64343,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	91170040	91225355	chr14:91170040-91225355	0	+	91170040	91215691	789624	10	161,151,123,204,183,100,149,162,389,672,	0,3248,5893,11145,18947,26334,29716,34665,45364,54643,
#Partially deleted in new
chr14	91175748	91181267	chr14:91175748-91181267	0	+	91175748	91175748	8553170	2	308,82,	0,5437,
#Partially deleted in new
chr14	91189786	91215793	chr14:91189786-91215793	0	+	91189786	91189786	8553170	5	21,100,149,120,389,	0,6588,9970,14919,25618,
#Partially deleted in new
chr14	91196392	91220766	chr14:91196392-91220766	0	+	91196392	91220766	789624	5	82,149,120,152,324,	0,3364,8313,19012,24050,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	91215856	91224822	chr14:91215856-91224822	0	+	91215856	91215856	8553170	3	604,117,139,	0,7822,8827,
#Partially deleted in new
chr14	91232531	91253925	chr14:91232531-91253925	3	-	91233952	91235050	789624	2	2648,211,	0,21183,
#Partially deleted in new
chr14	91232532	91244508	chr14:91232532-91244508	1	-	91233952	91235050	789624	2	2647,212,	0,11764,
#Partially deleted in new
chr14	91234036	91244508	chr14:91234036-91244508	0	-	91234036	91235050	789624	2	1143,212,	0,10260,
#Partially deleted in new
chr14	91235117	91253880	chr14:91235117-91253880	0	-	91235117	91235117	8553170	3	62,207,166,	0,2163,18597,
#Partially deleted in new
chr14	91242758	91250835	chr14:91242758-91250835	0	+	91242758	91242758	8553170	3	255,145,71,	0,1596,8006,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	91242934	91252211	chr14:91242934-91252211	3	+	91242934	91242934	8553170	4	79,69,145,1447,	0,978,1420,7830,
#Deleted in new
chr14	91258298	91259003	chr14:91258298-91259003	3	+	91258298	91258298	8553170	1	705,	0,
#Partially deleted in new
chr14	91271322	91289331	chr14:91271322-91289331	0	-	91285669	91289331	789624	7	2331,290,69,69,189,442,227,	0,6599,7915,10134,12006,14072,17782,
#Partially deleted in new
chr14	91271324	91285690	chr14:91271324-91285690	1	-	91272624	91285407	789624	7	1897,294,290,69,69,189,296,	0,2035,6597,7913,10132,12004,14070,
#Partially deleted in new
chr14	91271324	91417777	chr14:91271324-91417777	3	-	91272624	91417690	789624	30	2329,290,69,69,189,239,90,146,187,144,278,162,189,142,128,1071,138,185,145,147,159,82,185,141,84,59,70,109,101,147,	0,6597,7913,10132,12004,17780,19670,22848,25980,28602,32376,34440,35713,37026,38534,41755,44325,49795,53454,54585,66680,67164,67953,68559,71055,72274,88317,137334,145413,146306,
#Partially deleted in new
chr14	91273468	91283623	chr14:91273468-91283623	0	-	91273468	91273468	8553170	6	185,290,69,147,69,295,	0,4453,5769,7693,7988,9860,
#Partially deleted in new
chr14	91278140	91279977	chr14:91278140-91279977	0	-	91278140	91278140	8553170	2	71,740,	0,1097,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	91288731	91291071	chr14:91288731-91291071	0	-	91288731	91288731	8553170	2	612,77,	0,2263,
#Partially deleted in new
chr14	91313942	91315870	chr14:91313942-91315870	0	-	91313942	91313942	8553170	2	208,221,	0,1707,
#Deleted in new
chr14	91338053	91338856	chr14:91338053-91338856	0	-	91338053	91338053	8553170	2	110,368,	0,435,
#Partially deleted in new
chr14	91338861	91416838	chr14:91338861-91416838	0	-	91338861	91338861	8553170	7	601,141,84,59,70,109,101,	0,1022,3518,4737,20780,69797,77876,
#Partially deleted in new
chr14	91342142	91408758	chr14:91342142-91408758	0	-	91342142	91342142	8553170	4	321,59,70,100,	0,1456,17499,66516,
#Partially deleted in new
chr14	91378640	91417346	chr14:91378640-91417346	1	-	91379864	91417196	789624	4	1245,109,101,186,	0,30018,38097,38520,
#Partially deleted in new
chr14	91378658	91417844	chr14:91378658-91417844	1	-	91379864	91417690	789624	4	1227,109,101,214,	0,30000,38079,38972,
#Partially deleted in new
chr14	91384389	91417678	chr14:91384389-91417678	0	-	91384389	91384389	8553170	4	162,109,101,48,	0,24269,32348,33241,
#Partially deleted in new
chr14	91408129	91416775	chr14:91408129-91416775	0	-	91408129	91408129	8553170	2	638,38,	0,8608,
#Partially deleted in new
chr14	91418265	91421176	chr14:91418265-91421176	3	+	91418265	91418265	8553170	2	75,228,	0,2683,
#Deleted in new
chr14	91419448	91419751	chr14:91419448-91419751	7	+	91419448	91419448	16724991	1	303,	0,
#Partially deleted in new
chr14	91457610	91510144	chr14:91457610-91510144	3	-	91458758	91509647	789624	15	1259,227,191,143,170,159,103,132,117,117,78,618,99,56,639,	0,3770,4438,5124,7639,13226,15422,15628,18239,18797,19298,23965,28021,33136,51895,
#Partially deleted in new
chr14	91458007	91509763	chr14:91458007-91509763	1	-	91458758	91509647	789624	15	862,227,191,143,170,159,103,132,156,117,78,618,99,56,258,	0,3373,4041,4727,7242,12829,15025,15231,17803,18400,18901,23568,27624,32739,51498,
#Partially deleted in new
chr14	91458138	91510478	chr14:91458138-91510478	1	-	91458758	91509647	789624	13	731,227,191,143,170,159,103,132,156,117,78,56,973,	0,3242,3910,4596,7111,12698,14894,15100,17672,18269,18770,32608,51367,
#Partially deleted in new
chr14	91458329	91461684	chr14:91458329-91461684	0	-	91458329	91458329	8553170	2	540,304,	0,3051,
#Partially deleted in new
chr14	91458858	91466355	chr14:91458858-91466355	0	-	91458858	91458858	8553170	6	11,227,173,143,170,95,	0,2522,3190,3876,6391,7402,
#Partially deleted in new
chr14	91461380	91509654	chr14:91461380-91509654	0	-	91466414	91509654	789624	15	227,191,143,170,156,159,103,132,117,117,78,618,99,56,149,	0,668,1354,3869,4880,9456,11652,11858,14469,15027,15528,20195,24251,29366,48125,
#Partially deleted in new
chr14	91462053	91510480	chr14:91462053-91510480	0	-	91462053	91509647	789624	13	186,143,170,159,103,132,117,117,78,618,99,56,975,	0,681,3196,8783,10979,11185,13796,14354,14855,19522,23578,28693,47452,
#Partially deleted in new
chr14	91473348	91509647	chr14:91473348-91509647	0	-	91473348	91509647	789624	6	22,156,117,78,56,142,	0,2462,3059,3560,17398,36157,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	91474640	91481998	chr14:91474640-91481998	0	-	91474640	91474640	8553170	4	1326,117,78,423,	0,1767,2268,6935,
#Partially deleted in new
chr14	91475819	91481873	chr14:91475819-91481873	0	-	91475819	91481873	789624	4	147,72,78,298,	0,588,1089,5756,
#Partially deleted in new
chr14	91482039	91510554	chr14:91482039-91510554	0	-	91482039	91509647	789624	5	154,99,56,199,26,	0,3592,8707,27466,28489,
#Partially deleted in new
chr14	91485631	91510300	chr14:91485631-91510300	0	-	91485631	91509647	789624	4	99,56,199,226,	0,5115,23874,24443,
#Deleted in new
chr14	91554409	91554503	chr14:91554409-91554503	7	+	91554409	91554409	16724991	1	94,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	91572443	91575271	chr14:91572443-91575271	3	-	91572443	91572443	8553170	1	2828,	0,
#Partially deleted in new
chr14	91573327	91575271	chr14:91573327-91575271	0	-	91573327	91573327	8553170	1	1944,	0,
#Partially deleted in new
chr14	91580695	91669930	chr14:91580695-91669930	0	-	91639163	91669930	789624	13	412,75,101,136,111,111,198,140,330,188,155,155,117,	0,6506,7282,8838,11196,27598,29784,36901,40912,44124,55729,58400,89118,
#Partially deleted in new
chr14	91580773	91732086	chr14:91580773-91732086	3	-	91580888	91729479	789624	27	334,75,101,136,111,111,198,140,330,188,155,155,145,159,150,47,67,33,119,96,150,96,61,141,89,79,157,	0,6428,7204,8760,11118,27520,29706,36823,40834,44046,55651,58322,79063,89040,92093,93402,103103,110749,112352,112610,123778,127367,138644,142275,144306,148627,151156,
#Partially deleted in new
chr14	91589578	91592552	chr14:91589578-91592552	0	-	91589578	91589578	8553170	2	91,661,	0,2313,
#Deleted in new
chr14	91603172	91603433	chr14:91603172-91603433	7	-	91603172	91603172	16724991	1	261,	0,
#Deleted in new
chr14	91604401	91605319	chr14:91604401-91605319	7	-	91604401	91604401	16724991	1	918,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	91635523	91646235	chr14:91635523-91646235	0	-	91635523	91635523	8553170	3	1056,155,99,	0,3572,10613,
#Partially deleted in new
chr14	91704574	91732059	chr14:91704574-91732059	0	-	91704574	91729479	789624	6	127,96,61,89,79,130,	0,3566,14843,20505,24826,27355,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	91709110	91710617	chr14:91709110-91710617	7	+	91709110	91709110	16724991	2	299,886,	0,621,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	91714914	91715130	chr14:91714914-91715130	3	-	91714914	91714914	8553170	1	216,	0,
#Partially deleted in new
chr14	91723057	91780707	chr14:91723057-91780707	0	-	91723057	91729479	789624	4	132,89,79,132,	0,2022,6343,57518,
#Partially deleted in new
chr14	91723135	91780688	chr14:91723135-91780688	0	-	91723135	91729479	789624	5	54,89,79,156,113,	0,1944,6265,13558,57440,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	91752855	91759798	chr14:91752855-91759798	3	-	91752855	91752855	8553170	1	6943,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	91779750	91867529	chr14:91779750-91867529	3	-	91783099	91813769	789624	12	3460,200,115,192,117,101,76,92,168,234,123,268,	0,5411,7762,12616,18034,18548,19238,20530,22503,32561,33952,87511,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	91780178	91836440	chr14:91780178-91836440	1	-	91783099	91813769	789624	12	3032,200,115,192,117,101,76,92,168,234,123,258,	0,4983,7334,12188,17606,18120,18810,20102,22075,32133,33524,56004,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	91780954	91836447	chr14:91780954-91836447	1	-	91783099	91813769	789624	12	2256,200,115,192,117,101,76,92,168,234,123,77,	0,4207,6558,11412,16830,17344,18034,19326,21299,31357,32748,55416,
#Partially deleted in new
chr14	91782822	91836526	chr14:91782822-91836526	1	-	91783099	91813769	789624	11	388,200,115,117,101,76,92,168,234,123,156,	0,2339,4690,14962,15476,16166,17458,19431,29489,30880,53548,
#Partially deleted in new
chr14	91782926	91798998	chr14:91782926-91798998	0	-	91783099	91798998	789624	6	284,200,115,192,101,10,	0,2235,4586,9440,15372,16062,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	91812015	91813828	chr14:91812015-91813828	0	-	91812015	91812015	8553170	2	530,126,	0,1687,
#Deleted in new
chr14	91866274	91867536	chr14:91866274-91867536	0	-	91866274	91866274	8553170	2	351,275,	0,987,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	91869411	91874816	chr14:91869411-91874816	0	-	91869411	91869411	8553170	2	974,1320,	0,4085,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	91869440	91947399	chr14:91869440-91947399	1	-	91870223	91947229	789624	12	945,196,127,123,120,117,123,255,123,52,55,187,	0,8046,11851,13513,17752,21780,25509,67506,68889,71124,73466,77772,
#Partially deleted in new
chr14	91870041	91947823	chr14:91870041-91947823	3	-	91870223	91947229	789624	11	344,196,127,123,120,117,123,255,52,55,611,	0,7445,11250,12912,17151,21179,24908,66905,70523,72865,77171,
#Partially deleted in new
chr14	91870042	91947074	chr14:91870042-91947074	1	-	91870223	91946742	789624	11	343,196,127,123,120,117,123,255,52,55,364,	0,7444,11249,12911,17150,21178,24907,66904,70522,72864,76668,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	91870226	91878042	chr14:91870226-91878042	0	-	91870226	91870226	8553170	3	159,196,115,	0,7260,7701,
#Partially deleted in new
chr14	91937052	91947987	chr14:91937052-91947987	0	-	91937052	91947229	789624	5	149,52,55,238,53,	0,3512,5854,10160,10882,
#Partially deleted in new
chr14	91940564	91947691	chr14:91940564-91947691	0	-	91942144	91947229	789624	4	52,144,55,479,	0,1472,2342,6648,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr14	91965990	92040059	chr14:91965990-92040059	3	-	91969672	92039685	789624	21	3903,145,117,115,82,100,104,164,194,141,3030,213,87,41,363,166,69,276,111,62,513,	0,6726,8636,9181,10117,22293,27818,29361,33249,33977,37428,41649,44995,45764,48224,49705,51691,55565,59319,67201,73556,
#Partially deleted in new
chr14	91969512	92015751	chr14:91969512-92015751	0	-	91969672	92015751	789624	15	381,145,117,115,82,100,104,164,194,141,3030,213,41,363,56,	0,3204,5114,5659,6595,18771,24296,25839,29727,30455,33906,38127,42242,44702,46183,
#Partially deleted in new
chr14	91975171	91999379	chr14:91975171-91999379	0	-	91977225	91999379	789624	7	115,82,123,100,104,164,140,	0,936,1954,13112,18637,20180,24068,
#Partially deleted in new
chr14	92015832	92040896	chr14:92015832-92040896	0	-	92015832	92021660	789624	6	29,69,276,111,62,17,	0,1849,5723,9477,17359,25047,
#Partially deleted in new
chr14	92026565	92026887	chr14:92026565-92026887	7	+	92026565	92026565	16724991	1	322,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	92030540	92040017	chr14:92030540-92040017	0	-	92030540	92030540	8553170	3	236,62,471,	0,2651,9006,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr14	92049610	92106580	chr14:92049610-92106580	0	-	92058403	92106552	789624	13	204,196,150,119,97,167,133,88,67,86,45,165,52,	0,730,8708,21324,31354,32689,33515,39119,43641,44135,46482,47063,56918,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	92058551	92106621	chr14:92058551-92106621	1	-	92064319	92106552	789624	9	5863,119,97,167,133,88,45,165,93,	0,12383,22413,23748,24574,30178,37541,38122,47977,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	92058551	92106621	chr14:92058551-92106621	1	-	92064319	92106552	789624	9	5863,119,97,167,133,88,67,86,93,	0,12383,22413,23748,24574,30178,34700,35194,47977,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	92058551	92106621	chr14:92058551-92106621	1	-	92064319	92106552	789624	12	5863,119,27,97,167,133,88,67,86,45,165,93,	0,12383,21989,22413,23748,24574,30178,34700,35194,37541,38122,47977,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	92058551	92106625	chr14:92058551-92106625	3	-	92064319	92106552	0	11	5863,119,97,167,133,88,67,86,45,165,97,	0,12383,22413,23748,24574,30178,34700,35194,37541,38122,47977,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	92058551	92106564	chr14:92058551-92106564	1	-	92064319	92106552	0	11	5863,119,97,167,133,88,67,86,45,165,36,	0,12383,22413,23748,24574,30178,34700,35194,37541,38122,47977,
#Partially deleted in new
chr14	92062785	92106590	chr14:92062785-92106590	0	-	92093312	92106552	789624	10	1629,119,97,167,133,88,67,45,165,62,	0,8149,18179,19514,20340,25944,30466,33307,33888,43743,
#Partially deleted in new
chr14	92063880	92106582	chr14:92063880-92106582	1	-	92064319	92083196	0	8	534,119,97,167,133,88,67,54,	0,7054,17084,18419,19245,24849,29371,42648,
#Partially deleted in new
chr14	92064093	92106610	chr14:92064093-92106610	1	-	92064319	92106552	0	10	321,119,97,167,133,88,67,86,45,82,	0,6841,16871,18206,19032,24636,29158,29652,31999,42435,
#Partially deleted in new
chr14	92064093	92106600	chr14:92064093-92106600	1	-	92064319	92106552	0	10	321,119,97,167,133,88,67,86,165,72,	0,6841,16871,18206,19032,24636,29158,29652,32580,42435,
#Partially deleted in new
chr14	92070744	92106562	chr14:92070744-92106562	1	-	92070830	92106552	0	10	309,97,167,133,88,67,86,45,165,34,	0,10220,11555,12381,17985,22507,23001,25348,25929,35784,
#Partially deleted in new
chr14	92070934	92106574	chr14:92070934-92106574	0	-	92070934	92106552	789624	10	119,97,167,133,88,67,86,42,165,46,	0,10030,11365,12191,17795,22317,22811,25158,25739,35594,
#Partially deleted in new
chr14	92070934	92106574	chr14:92070934-92106574	0	-	92070934	92106552	789624	8	119,97,167,133,88,67,86,46,	0,10030,11365,12191,17795,22317,22811,35594,
#Partially deleted in new
chr14	92070934	92106574	chr14:92070934-92106574	0	-	92093312	92106552	789624	8	119,97,133,88,67,45,165,46,	0,10030,12191,17795,22317,25158,25739,35594,
#Partially deleted in new
chr14	92070934	92106574	chr14:92070934-92106574	0	-	92083230	92106552	789624	10	119,97,167,110,88,67,86,45,165,46,	0,10030,11365,12191,17795,22317,22811,25158,25739,35594,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92070937	92070937	8553170	7	116,109,167,133,88,67,46,	0,10015,11362,12188,17792,22314,35591,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92070937	92070937	8553170	10	116,109,167,133,88,67,86,45,165,46,	0,10015,11362,12188,17792,22314,22808,25155,25736,35591,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92093312	92106552	789624	11	116,54,97,167,133,87,88,67,45,165,46,	0,8477,10027,11362,12188,12479,17792,22314,25155,25736,35591,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92070937	92106552	789624	8	116,97,167,133,88,45,165,46,	0,10027,11362,12188,17792,25155,25736,35591,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92070937	92070937	8553170	9	116,54,97,167,133,88,45,165,46,	0,8477,10027,11362,12188,17792,25155,25736,35591,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92083192	92106552	789624	8	116,97,167,133,67,86,45,46,	0,10027,11362,12188,22314,22808,25155,35591,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92070937	92070937	8553170	8	116,109,167,133,88,45,165,46,	0,10015,11362,12188,17792,25155,25736,35591,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92070937	92070937	8553170	7	116,97,133,88,67,45,46,	0,10027,12188,17792,22314,25155,35591,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92070937	92070937	789624	8	116,109,167,133,88,67,45,46,	0,10015,11362,12188,17792,22314,25155,35591,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92088804	92106552	789624	9	116,97,167,133,88,86,45,165,46,	0,10027,11362,12188,17792,22808,25155,25736,35591,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92070937	92070937	8553170	11	116,54,97,167,133,88,67,86,45,165,46,	0,8477,10027,11362,12188,17792,22314,22808,25155,25736,35591,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92083192	92106552	789624	9	116,97,167,133,67,86,45,165,46,	0,10027,11362,12188,22314,22808,25155,25736,35591,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92070937	92070937	8553170	9	116,109,167,133,88,67,86,45,46,	0,10015,11362,12188,17792,22314,22808,25155,35591,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92070937	92106552	789624	7	116,97,167,133,88,45,46,	0,10027,11362,12188,17792,25155,35591,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92093312	92106552	789624	9	116,109,167,110,88,67,45,165,46,	0,10015,11362,12188,17792,22314,25155,25736,35591,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92093312	92106552	789624	9	116,97,167,110,88,67,45,165,46,	0,10027,11362,12188,17792,22314,25155,25736,35591,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92070937	92070937	8553170	6	116,67,86,45,165,46,	0,22314,22808,25155,25736,35591,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92093312	92106552	789624	11	116,54,97,167,133,88,67,105,45,165,46,	0,8477,10027,11362,12188,17792,22314,22808,25155,25736,35591,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92070937	92070937	8553170	4	116,45,165,46,	0,25155,25736,35591,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92083492	92106552	789624	9	116,97,167,110,87,88,45,165,46,	0,10027,11362,12188,12479,17792,25155,25736,35591,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92083192	92106552	789624	7	116,97,167,133,45,165,46,	0,10027,11362,12188,25155,25736,35591,
#Partially deleted in new
chr14	92070937	92106572	chr14:92070937-92106572	0	-	92081031	92106552	789624	7	116,93,167,133,88,165,44,	0,10027,11362,12188,17792,25736,35591,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	0	-	92070937	92083196	789624	5	116,97,167,133,46,	0,10027,11362,12188,35591,
#Partially deleted in new
chr14	92070937	92106574	chr14:92070937-92106574	1	-	92079434	92106552	789624	11	126,54,97,167,133,88,67,86,45,165,46,	0,8477,10027,11362,12188,17792,22314,22808,25155,25736,35591,
#Partially deleted in new
chr14	92071010	92106574	chr14:92071010-92106574	0	-	92071010	92083196	789624	8	43,97,167,133,88,67,42,46,	0,9954,11289,12115,17719,22241,25082,35518,
#Partially deleted in new
chr14	92071010	92106574	chr14:92071010-92106574	0	-	92093312	92106552	789624	7	43,133,88,67,45,165,46,	0,12115,17719,22241,25082,25663,35518,
#Partially deleted in new
chr14	92071010	92106574	chr14:92071010-92106574	0	-	92093312	92106552	789624	9	43,97,167,133,88,67,42,165,46,	0,9954,11289,12115,17719,22241,25082,25663,35518,
#Partially deleted in new
chr14	92071010	92106574	chr14:92071010-92106574	0	-	92081031	92083196	789624	8	43,93,167,133,88,67,45,46,	0,9954,11289,12115,17719,22241,25082,35518,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	92080964	92106574	chr14:92080964-92106574	0	-	92083492	92106552	789624	10	97,167,133,87,88,67,86,45,165,46,	0,1335,2161,2452,7765,12287,12781,15128,15709,25564,
#Partially deleted in new
chr14	92080967	92106621	chr14:92080967-92106621	1	-	92080967	92106552	789624	10	27,65,167,133,88,67,86,45,165,93,	0,29,1332,2158,7762,12284,12778,15125,15706,25561,
#Partially deleted in new
chr14	92080987	92106562	chr14:92080987-92106562	0	-	92083192	92106552	789624	6	74,167,133,45,165,34,	0,1312,2138,15105,15686,25541,
#Partially deleted in new
chr14	92081022	92106573	chr14:92081022-92106573	0	-	92081022	92106552	789624	6	39,167,133,88,165,45,	0,1277,2103,7707,15651,25506,
#Partially deleted in new
chr14	92082342	92106535	chr14:92082342-92106535	0	-	92082342	92106535	789624	7	124,110,67,86,45,165,7,	0,783,10909,11403,13750,14331,24186,
#Partially deleted in new
chr14	92090378	92106567	chr14:92090378-92106567	0	-	92090378	92090378	8553170	6	189,67,86,45,165,39,	0,2873,3367,5714,6295,16150,
#Partially deleted in new
chr14	92093378	92106573	chr14:92093378-92106573	0	-	92093378	92093378	8553170	4	453,45,165,45,	0,2714,3295,13150,
#Partially deleted in new
chr14	92093551	92106591	chr14:92093551-92106591	0	-	92093551	92093551	8553170	5	67,86,45,165,63,	0,194,2541,3122,12977,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	92096276	92106564	chr14:92096276-92106564	0	-	92096276	92096276	8553170	2	562,36,	0,10252,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	92116121	92121724	chr14:92116121-92121724	1	-	92116192	92117637	0	4	108,145,118,83,	0,1376,2727,5520,
#Partially deleted in new
chr14	92116122	92121917	chr14:92116122-92121917	3	-	92116192	92121777	0	3	107,145,276,	0,1375,5519,
#Partially deleted in new
chr14	92116124	92121727	chr14:92116124-92121727	1	-	92116192	92117637	0	3	105,145,86,	0,1373,5517,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	92116125	92118726	chr14:92116125-92118726	0	-	92116125	92116125	8553170	2	104,1229,	0,1372,
#Partially deleted in new
chr14	92116125	92121404	chr14:92116125-92121404	1	-	92116192	92117637	0	3	104,145,209,	0,1372,5070,
#Partially deleted in new
chr14	92116125	92121809	chr14:92116125-92121809	1	-	92116192	92121777	0	3	104,145,168,	0,1372,5516,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	92120330	92121693	chr14:92120330-92121693	0	-	92120330	92120330	8553170	2	86,482,	0,881,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr14	92121936	92172145	chr14:92121936-92172145	3	+	92130984	92161744	789624	16	192,59,183,160,106,130,116,188,291,101,201,153,226,300,135,10494,	0,4185,9014,12074,12313,13430,16295,20227,21067,32421,33186,34542,35722,37046,39175,39715,
#Partially deleted in new
chr14	92121971	92134103	chr14:92121971-92134103	0	+	92130984	92134103	789624	4	380,59,183,93,	0,4150,8979,12039,
#Partially deleted in new
chr14	92121984	92135432	chr14:92121984-92135432	0	+	92130984	92134289	789624	5	144,59,183,106,66,	0,4137,8966,12265,13382,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	92154020	92155153	chr14:92154020-92155153	0	+	92154020	92154020	8553170	2	438,31,	0,1102,
#Partially deleted in new
chr14	92155178	92161246	chr14:92155178-92161246	0	+	92155178	92161246	789624	4	145,226,300,135,	0,2480,3804,5933,
#Partially deleted in new
chr14	92253492	92263656	chr14:92253492-92263656	3	-	92253492	92253492	8553170	2	446,134,	0,10030,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	92265701	92265807	chr14:92265701-92265807	3	+	92265701	92265701	8553170	1	106,	0,
#Partially deleted in new
chr14	92322580	92496251	chr14:92322580-92496251	1	+	92325929	92493628	789624	17	55,111,77,75,85,104,75,26,54,143,170,205,167,115,113,66,2776,	0,3287,111331,116754,119508,120132,120819,122736,124790,126493,131319,133823,160099,164085,169084,169594,170895,
#Partially deleted in new
chr14	92323192	92496251	chr14:92323192-92496251	3	+	92323830	92493628	789624	18	73,153,111,77,75,85,104,75,26,54,86,170,205,167,115,113,66,2776,	0,615,2675,110719,116142,118896,119520,120207,122124,124178,125881,130707,133211,159487,163473,168472,168982,170283,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr14	92323604	92501483	chr14:92323604-92501483	1	+	92323830	92493628	789624	17	356,111,77,75,85,104,75,26,54,143,170,205,167,115,113,66,8008,	0,2263,110307,115730,118484,119108,119795,121712,123766,125469,130295,132799,159075,163061,168060,168570,169871,
#Partially deleted in new
chr14	92408378	92442753	chr14:92408378-92442753	0	+	92439343	92442753	789624	5	56,77,75,85,41,	0,25533,30956,33710,34334,
#Partially deleted in new
chr14	92439363	92496252	chr14:92439363-92496252	0	+	92439363	92492907	789624	15	46,85,104,75,26,54,86,170,205,167,115,113,66,98,2777,	0,2725,3349,4036,5953,8007,9710,14536,17040,43316,47302,52301,52811,53463,54112,
#Partially deleted in new
chr14	92443364	92493922	chr14:92443364-92493922	0	+	92443364	92443364	8553170	11	110,26,54,143,170,205,167,115,113,66,447,	0,1952,4006,5709,10535,13039,39315,43301,48300,48810,50111,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	92450217	92462747	chr14:92450217-92462747	0	+	92450217	92450217	8553170	7	2429,170,205,109,79,89,305,	0,3682,6186,7036,7280,11920,12225,
#Partially deleted in new
chr14	92452765	92496252	chr14:92452765-92496252	0	+	92452765	92452765	8553170	7	1304,205,167,115,113,66,2777,	0,3638,29914,33900,38899,39409,40710,
#Partially deleted in new
chr14	92513773	92688994	chr14:92513773-92688994	3	+	92513932	92688252	0	10	203,205,118,73,92,1494,309,132,164,1069,	0,41977,63586,101633,127464,137808,145387,162701,171213,174152,
#Partially deleted in new
chr14	92513792	92688041	chr14:92513792-92688041	0	+	92513932	92651602	789624	9	184,205,118,92,1494,309,132,164,116,	0,41958,63567,127445,137789,145368,162682,171194,174133,
#Partially deleted in new
chr14	92513792	92688987	chr14:92513792-92688987	1	+	92513932	92688252	789624	11	184,205,118,73,92,362,916,309,132,164,1062,	0,41958,63567,101614,127445,137789,138367,145368,162682,171194,174133,
#Deleted in new
chr14	92513803	92515507	chr14:92513803-92515507	1	+	92513932	92515356	789624	2	173,344,	0,1360,
#Partially deleted in new
chr14	92555839	92616028	chr14:92555839-92616028	0	+	92555839	92555839	8553170	3	116,118,622,	0,21520,59567,
#Partially deleted in new
chr14	92576233	92688987	chr14:92576233-92688987	0	+	92576233	92576233	8553170	9	148,118,73,92,1494,309,132,164,1062,	0,1126,39173,65004,75348,82927,100241,108753,111692,
#Partially deleted in new
chr14	92576243	92586580	chr14:92576243-92586580	0	+	92576243	92576243	8553170	3	138,118,134,	0,1116,10203,
#Partially deleted in new
chr14	92577294	92586580	chr14:92577294-92586580	0	+	92577294	92577294	8553170	2	183,134,	0,9152,
#Partially deleted in new
chr14	92615472	92645190	chr14:92615472-92645190	0	+	92615472	92615472	8553170	3	7,92,766,	0,25765,28952,
#Deleted in new
chr14	92650917	92652115	chr14:92650917-92652115	0	+	92650917	92650917	8553170	2	43,534,	0,664,
#Partially deleted in new
chr14	92652500	92688049	chr14:92652500-92688049	0	+	92652500	92685231	789624	4	575,309,132,3063,	0,6660,23974,32486,
#Partially deleted in new
chr14	92659384	92688049	chr14:92659384-92688049	0	+	92659384	92659384	8553170	4	85,74,164,364,	0,17148,25602,28301,
#Partially deleted in new
chr14	92703806	92748612	chr14:92703806-92748612	1	-	92704262	92732786	0	12	555,201,90,119,67,63,76,86,82,98,167,124,	0,5865,7852,8030,8998,10016,10569,12329,13573,14940,28842,44682,
#Partially deleted in new
chr14	92703808	92748702	chr14:92703808-92748702	3	-	92704318	92732786	0	14	553,68,171,201,90,119,67,63,76,86,82,98,167,214,	0,831,2674,5863,7850,8028,8996,10014,10567,12327,13571,14938,28840,44680,
#Partially deleted in new
chr14	92703821	92717459	chr14:92703821-92717459	0	-	92704089	92717459	789624	3	426,37,80,	0,12363,13558,
#Partially deleted in new
chr14	92703838	92748645	chr14:92703838-92748645	1	-	92704318	92732786	0	13	523,68,201,90,119,67,63,76,86,82,98,167,157,	0,801,5833,7820,7998,8966,9984,10537,12297,13541,14908,28810,44650,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr14	92703843	92748679	chr14:92703843-92748679	1	-	92704318	92732786	0	15	518,68,171,201,90,119,67,63,76,86,82,98,167,118,191,	0,796,2639,5828,7815,7993,8961,9979,10532,12292,13536,14903,28805,37218,44645,
#Partially deleted in new
chr14	92703846	92748603	chr14:92703846-92748603	0	-	92714415	92732786	789624	13	515,68,171,201,90,119,67,63,76,82,98,167,115,	0,793,2636,5825,7812,7990,8958,9976,10529,13533,14900,28802,44642,
#Deleted in new
chr14	92704275	92704905	chr14:92704275-92704905	0	-	92704275	92704275	8553170	2	86,266,	0,364,
#Partially deleted in new
chr14	92706352	92712834	chr14:92706352-92712834	0	-	92706352	92706352	8553170	5	301,201,90,119,30,	0,3319,5306,5484,6452,
#Partially deleted in new
chr14	92711658	92748612	chr14:92711658-92748612	0	-	92712742	92732786	789624	10	90,119,149,63,76,86,82,98,167,124,	0,178,1064,2164,2717,4477,5721,7088,20990,36830,
#Partially deleted in new
chr14	92713851	92748627	chr14:92713851-92748627	0	-	92717438	92732786	789624	6	34,76,86,68,167,139,	0,524,2284,3528,18797,34637,
#Partially deleted in new
chr14	92714423	92748627	chr14:92714423-92748627	0	-	92714423	92732786	789624	6	28,86,82,71,167,139,	0,1712,2956,4350,18225,34065,
#Partially deleted in new
chr14	92715743	92748612	chr14:92715743-92748612	0	-	92715743	92715743	8553170	5	478,82,98,167,124,	0,1636,3003,16905,32745,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	92718746	92748627	chr14:92718746-92748627	0	-	92718746	92732786	789624	4	98,167,129,139,	0,13902,14935,29742,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	92718746	92748627	chr14:92718746-92748627	0	-	92718746	92732786	789624	4	98,167,142,139,	0,13902,22971,29742,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	92718809	92748627	chr14:92718809-92748627	0	-	92718809	92732786	789624	5	35,167,129,118,139,	0,13839,14872,22252,29679,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	92718810	92748627	chr14:92718810-92748627	0	-	92718810	92732786	789624	4	34,167,155,139,	0,13838,22894,29678,
#Partially deleted in new
chr14	92732395	92748624	chr14:92732395-92748624	0	-	92732395	92732395	8553170	2	420,136,	0,16093,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	92741432	92748626	chr14:92741432-92748626	0	-	92741432	92741432	8553170	2	427,138,	0,7056,
#Partially deleted in new
chr14	92794230	92839963	chr14:92794230-92839963	3	+	92797437	92839446	789624	13	226,574,228,220,124,204,171,129,99,226,106,64,598,	0,3177,12505,15069,16023,17320,22020,25477,30315,38891,41328,43155,45135,
#Partially deleted in new
chr14	92809383	92810703	chr14:92809383-92810703	0	+	92809383	92809383	8553170	2	136,450,	0,870,
#Partially deleted in new
chr14	92833125	92839796	chr14:92833125-92839796	0	+	92833125	92839390	789624	3	222,106,431,	0,2433,6240,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	92886351	92893026	chr14:92886351-92893026	0	+	92886351	92886351	8553170	3	82,93,271,	0,5443,6404,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	92891423	92893506	chr14:92891423-92893506	3	+	92891423	92891423	8553170	2	278,1712,	0,371,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	92891608	92893026	chr14:92891608-92893026	0	+	92891608	92891608	8553170	3	93,93,246,	0,186,1172,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	92891616	92893026	chr14:92891616-92893026	1	+	92891616	92891616	8553170	3	85,93,271,	0,178,1139,
#Deleted in new
chr14	92905696	92907482	chr14:92905696-92907482	3	-	92905696	92905696	789624	2	970,414,	0,1372,
#Partially deleted in new
chr14	92923079	92935293	chr14:92923079-92935293	3	+	92923359	92934884	0	8	326,47,94,69,99,453,482,493,	0,1119,3525,4470,6637,8170,9290,11721,
#Partially deleted in new
chr14	92923156	92931681	chr14:92923156-92931681	0	+	92923359	92927573	789624	5	249,47,69,99,432,	0,1042,4393,6560,8093,
#Partially deleted in new
chr14	92923175	92935253	chr14:92923175-92935253	1	+	92923359	92934884	789624	7	230,47,94,69,99,482,453,	0,1023,3429,4374,6541,9194,11625,
#Partially deleted in new
chr14	92923362	92932268	chr14:92923362-92932268	0	+	92923362	92923362	8553170	6	43,94,69,99,453,131,	0,3242,4187,6354,7887,8775,
#Deleted in new
chr14	92926100	92927589	chr14:92926100-92927589	0	+	92926100	92926100	8553170	2	598,40,	0,1449,
#Partially deleted in new
chr14	92931676	92933255	chr14:92931676-92933255	0	+	92931676	92931676	8553170	2	26,886,	0,693,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	92936913	93115803	chr14:92936913-93115803	3	-	92941560	93115163	0	11	4991,163,68,166,41,99,118,126,25,237,32,	0,9417,15032,21287,25441,25837,56966,79762,139681,178155,178858,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	92936913	93115918	chr14:92936913-93115918	1	-	92938482	93115163	0	11	1613,163,68,166,41,99,118,126,25,237,147,	0,9417,15032,21287,25441,25837,56966,79762,139681,178155,178858,
#Partially deleted in new
chr14	92939752	93115871	chr14:92939752-93115871	1	-	92941560	93115163	0	11	2152,163,68,166,41,99,118,126,25,116,100,	0,6578,12193,18448,22602,22998,54127,76923,136842,175316,176019,
#Partially deleted in new
chr14	92939861	93115279	chr14:92939861-93115279	1	-	92941560	92993886	789624	9	2043,163,68,166,41,99,118,126,211,	0,6469,12084,18339,22493,22889,54018,76814,175207,
#Partially deleted in new
chr14	92946330	93036880	chr14:92946330-93036880	0	-	92946330	92946330	8553170	7	163,68,166,41,99,126,34,	0,5615,11870,16024,16420,70345,90516,
#Partially deleted in new
chr14	92946458	92998939	chr14:92946458-92998939	0	-	92946458	92946458	8553170	7	35,68,166,41,99,118,37,	0,5487,11742,15896,16292,47421,52444,
#Partially deleted in new
chr14	92958200	93115286	chr14:92958200-93115286	0	-	92958200	93115163	789624	6	166,41,99,118,25,218,	0,4154,4550,35679,118394,156868,
#Partially deleted in new
chr14	92958233	93066358	chr14:92958233-93066358	0	-	92958233	92958233	8553170	6	133,41,99,118,126,174,	0,4121,4517,35646,58442,107951,
#Partially deleted in new
chr14	92958270	93115272	chr14:92958270-93115272	0	-	92958270	93115163	789624	7	96,41,117,118,126,25,204,	0,4084,4480,35609,58405,118324,156798,
#Partially deleted in new
chr14	92962354	93115822	chr14:92962354-93115822	0	-	92962354	93115163	789624	7	41,99,118,126,25,149,51,	0,396,31525,54321,114240,152714,153417,
#Partially deleted in new
chr14	92962354	93116320	chr14:92962354-93116320	0	-	92962354	93115163	789624	7	41,99,118,126,25,116,245,	0,396,31525,54321,114240,152714,153721,
#Partially deleted in new
chr14	92962831	93036974	chr14:92962831-93036974	0	-	92962831	92962831	8553170	4	18,118,126,128,	0,31048,53844,74015,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	93067451	93072152	chr14:93067451-93072152	3	+	93067451	93067451	789624	1	4701,	0,
#Deleted in new
chr14	93138065	93138465	chr14:93138065-93138465	7	+	93138065	93138065	16724991	1	400,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	93182195	93184928	chr14:93182195-93184928	3	-	93183186	93184242	789624	3	2167,155,119,	0,2363,2614,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	93182198	93184923	chr14:93182198-93184923	1	-	93183186	93184242	789624	2	2164,365,	0,2360,
#Partially deleted in new
chr14	93184950	93187086	chr14:93184950-93187086	3	+	93186275	93186671	789624	2	82,827,	0,1309,
#Partially deleted in new
chr14	93184972	93209957	chr14:93184972-93209957	0	+	93186275	93188937	789624	4	60,244,105,134,	0,1287,3920,24851,
#Partially deleted in new
chr14	93184973	93218586	chr14:93184973-93218586	0	+	93184973	93184973	8553170	7	59,134,61,96,54,106,60,	0,24850,25674,27058,29955,30202,33553,
#Partially deleted in new
chr14	93184992	93212127	chr14:93184992-93212127	3	+	93186275	93212127	789624	5	40,223,134,61,96,	0,1267,24831,25655,27039,
#Partially deleted in new
chr14	93185012	93187089	chr14:93185012-93187089	1	+	93185387	93186671	789624	2	473,830,	0,1247,
#Partially deleted in new
chr14	93202893	93207094	chr14:93202893-93207094	3	-	93203687	93207037	789624	2	889,265,	0,3936,
#Partially deleted in new
chr14	93203505	93207029	chr14:93203505-93207029	0	-	93203665	93207029	789624	2	277,121,	0,3403,
#Partially deleted in new
chr14	93207055	93229215	chr14:93207055-93229215	3	+	93207291	93227035	789624	11	386,134,61,96,54,106,209,150,163,62,2273,	0,2768,3592,4976,7873,8120,11471,12156,13193,15257,19887,
#Partially deleted in new
chr14	93207240	93218557	chr14:93207240-93218557	0	+	93207291	93218557	789624	6	201,134,61,54,106,31,	0,2583,3407,7688,7935,11286,
#Partially deleted in new
chr14	93207242	93227118	chr14:93207242-93227118	0	+	93207291	93210662	789624	10	199,61,96,54,106,209,150,163,62,176,	0,3405,4789,7686,7933,11284,11969,13006,15070,19700,
#Partially deleted in new
chr14	93207242	93218674	chr14:93207242-93218674	0	+	93207291	93218674	789624	4	199,54,106,148,	0,7686,7933,11284,
#Partially deleted in new
chr14	93207293	93215199	chr14:93207293-93215199	0	+	93207293	93215199	789624	6	148,134,34,96,54,24,	0,2530,3381,4738,7635,7882,
#Partially deleted in new
chr14	93209896	93227024	chr14:93209896-93227024	0	+	93209896	93227024	789624	7	61,61,96,54,106,62,82,	0,751,2135,5032,5279,12416,17046,
#Partially deleted in new
chr14	93218680	93227225	chr14:93218680-93227225	0	+	93218680	93227035	789624	4	55,163,62,283,	0,1568,3632,8262,
#Deleted in new
chr14	93223597	93224139	chr14:93223597-93224139	7	-	93223597	93223597	16724991	1	542,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	93237549	93333021	chr14:93237549-93333021	3	-	93242272	93296051	789624	11	5539,462,179,190,144,161,76,209,1080,188,202,	0,8275,10926,13913,16097,19645,24052,26235,56308,58420,95270,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	93237549	93293928	chr14:93237549-93293928	0	-	93261669	93293928	789624	8	5539,462,179,190,144,161,76,71,	0,8275,10926,13913,16097,19645,24052,56308,
#Partially deleted in new
chr14	93242032	93333039	chr14:93242032-93333039	1	-	93242272	93332928	789624	9	1056,462,179,190,144,161,76,209,220,	0,3792,6443,9430,11614,15162,19569,21752,90787,
#Partially deleted in new
chr14	93242037	93294149	chr14:93242037-93294149	0	-	93242272	93294149	789624	7	1051,462,179,190,144,161,292,	0,3787,6438,9425,11609,15157,51820,
#Partially deleted in new
chr14	93244009	93244323	chr14:93244009-93244323	7	+	93244009	93244009	16724991	1	314,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	93255509	93294617	chr14:93255509-93294617	0	-	93255509	93255509	8553170	4	1846,76,209,760,	0,6092,8275,38348,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	93287627	93333092	chr14:93287627-93333092	1	-	93288636	93296051	789624	4	1080,1080,188,273,	0,6230,8342,45192,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	93287671	93296158	chr14:93287671-93296158	1	-	93288455	93296051	789624	3	1059,1080,189,	0,6186,8298,
#Partially deleted in new
chr14	93294852	93332346	chr14:93294852-93332346	0	-	93294852	93296051	789624	3	85,188,43,	0,1117,37451,
#Boundary problem: need 50, got 0, diff 50, mapped 0.0
chr14	93333218	93707272	chr14:93333218-93707272	3	+	93477640	93706904	789624	50	305,121,146,171,93,56,130,65,89,41,29,230,172,231,191,124,141,222,228,142,80,149,158,182,202,180,287,183,163,1221,108,117,84,103,141,39,113,86,174,69,111,105,78,90,176,187,198,78,42,569,	0,134452,141029,144339,154444,163192,163938,190759,195339,196067,199331,204770,207441,209247,238675,239474,241839,244623,246930,248984,253377,253541,260461,264140,267350,270020,279578,283903,284973,288402,297582,301302,303997,307926,310338,313389,320523,320721,322015,325974,329385,340132,349398,353353,355446,356898,358530,361116,371406,373485,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	93334527	93335057	chr14:93334527-93335057	3	+	93334527	93334527	8553170	1	530,	0,
#Deleted in new
chr14	93347190	93348356	chr14:93347190-93348356	3	+	93347268	93348120	789624	2	204,329,	0,837,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	93397138	93397234	chr14:93397138-93397234	3	-	93397138	93397138	8553170	1	96,	0,
#Boundary problem: need 49, got 0, diff 49, mapped 0.0
chr14	93430336	93706904	chr14:93430336-93706904	1	+	93431029	93706904	789624	49	715,121,305,171,93,56,130,65,89,41,29,230,172,231,191,124,141,222,228,142,80,149,158,182,202,180,287,183,163,1221,108,84,103,141,39,113,86,174,69,111,105,78,90,176,187,198,78,42,201,	0,37334,43752,47221,57326,66074,66820,93641,98221,98949,102213,107652,110323,112129,141557,142356,144721,147505,149812,151866,156259,156423,163343,167022,170232,172902,182460,186785,187855,191284,200464,206879,210808,213220,216271,223405,223603,224897,228856,232267,243014,252280,256235,258328,259780,261412,263998,274288,276367,
#Boundary problem: need 51, got 0, diff 51, mapped 0.0
chr14	93430875	93707876	chr14:93430875-93707876	1	+	93431029	93706904	789624	51	176,121,305,171,93,56,130,65,89,41,29,230,172,231,191,124,141,222,228,142,80,149,158,182,202,180,66,287,183,163,1221,108,117,84,103,141,39,113,86,174,69,111,105,78,90,176,187,198,78,42,1173,	0,36795,43213,46682,56787,65535,66281,93102,97682,98410,101674,107113,109784,111590,141018,141817,144182,146966,149273,151327,155720,155884,162804,166483,169693,172363,174020,181921,186246,187316,190745,199925,203645,206340,210269,212681,215732,222866,223064,224358,228317,231728,242475,251741,255696,257789,259241,260873,263459,273749,275828,
#Boundary problem: need 50, got 0, diff 50, mapped 0.0
chr14	93431029	93706904	chr14:93431029-93706904	1	+	93431029	93706904	789624	50	22,121,305,171,93,56,130,65,89,41,29,230,172,231,191,124,141,222,228,142,80,149,158,182,202,180,287,183,163,1221,108,117,84,103,141,39,113,86,174,69,111,105,78,90,176,187,198,78,42,201,	0,36641,43059,46528,56633,65381,66127,92948,97528,98256,101520,106959,109630,111436,140864,141663,144028,146812,149119,151173,155566,155730,162650,166329,169539,172209,181767,186092,187162,190591,199771,203491,206186,210115,212527,215578,222712,222910,224204,228163,231574,242321,251587,255542,257635,259087,260719,263305,273595,275674,
#Deleted in new
chr14	93437399	93437510	chr14:93437399-93437510	3	-	93437399	93437399	8553170	1	111,	0,
#Boundary problem: need 47, got 0, diff 47, mapped 0.0
chr14	93477640	93706904	chr14:93477640-93706904	1	+	93477640	93706904	789624	47	88,93,56,130,65,89,41,29,230,172,231,191,124,141,222,228,142,80,149,158,182,202,180,287,183,163,1221,108,117,84,103,141,39,113,86,174,69,111,105,78,90,176,187,198,78,42,201,	0,10022,18770,19516,46337,50917,51645,54909,60348,63019,64825,94253,95052,97417,100201,102508,104562,108955,109119,116039,119718,122928,125598,135156,139481,140551,143980,153160,156880,159575,163504,165916,168967,176101,176299,177593,181552,184963,195710,204976,208931,211024,212476,214108,216694,226984,229063,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	93637178	93637338	chr14:93637178-93637338	3	+	93637178	93637178	8553170	1	160,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	93688992	93707343	chr14:93688992-93707343	0	+	93688992	93688992	8553170	4	2954,78,42,640,	0,5342,15632,17711,
#Partially deleted in new
chr14	93718297	93788481	chr14:93718297-93788481	3	-	93721443	93787718	789624	5	3249,130,136,124,72,	0,18943,60878,69328,70112,
#Partially deleted in new
chr14	93718297	93787759	chr14:93718297-93787759	1	-	93721443	93787718	789624	4	3249,130,136,134,	0,18943,60878,69328,
#Partially deleted in new
chr14	93721037	93787759	chr14:93721037-93787759	1	-	93725990	93787718	789624	5	509,171,130,136,134,	0,4798,16203,58138,66588,
#Partially deleted in new
chr14	93721037	93788420	chr14:93721037-93788420	0	-	93725990	93787718	789624	6	509,171,130,136,124,11,	0,4798,16203,58138,66588,67372,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	93895761	93897759	chr14:93895761-93897759	3	+	93895761	93895761	8553170	1	1998,	0,
#Partially deleted in new
chr14	93918893	93929169	chr14:93918893-93929169	1	+	93928285	93929164	789624	2	101,971,	0,9305,
#Partially deleted in new
chr14	93918911	93929608	chr14:93918911-93929608	3	+	93925271	93929164	789624	3	83,323,1410,	0,6136,9287,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	93922475	93927066	chr14:93922475-93927066	1	-	93922475	93922475	8553170	3	1525,227,152,	0,2636,4439,
#Deleted in new
chr14	93923616	93926340	chr14:93923616-93926340	1	-	93923616	93923616	8553170	3	234,227,65,	0,1495,2659,
#Deleted in new
chr14	93923672	93926966	chr14:93923672-93926966	1	-	93923672	93923672	8553170	3	328,165,52,	0,1439,3242,
#Deleted in new
chr14	93927258	93929164	chr14:93927258-93929164	1	+	93928285	93929164	789624	2	196,966,	0,940,
#Deleted in new
chr14	93927341	93928982	chr14:93927341-93928982	0	+	93928285	93928982	789624	2	58,784,	0,857,
#Deleted in new
chr14	93927384	93929608	chr14:93927384-93929608	1	+	93928285	93929164	789624	2	242,1410,	0,814,
#Partially deleted in new
chr14	93934152	93976791	chr14:93934152-93976791	3	-	93934655	93964539	789624	10	640,154,565,172,246,156,167,105,279,358,	0,3545,4955,13196,16846,19199,20164,22613,30181,42281,
#Partially deleted in new
chr14	93934165	93957421	chr14:93934165-93957421	1	-	93934655	93956932	789624	8	627,154,565,172,246,156,167,656,	0,3532,4942,13183,16833,19186,20151,22600,
#Partially deleted in new
chr14	93934166	93940495	chr14:93934166-93940495	0	-	93934166	93934166	8553170	3	626,154,1388,	0,3531,4941,
#Partially deleted in new
chr14	93937718	93955579	chr14:93937718-93955579	0	-	93937718	93955112	789624	7	133,565,172,246,156,167,472,	0,1389,9630,13280,15633,16598,17389,
#Partially deleted in new
chr14	93939334	93976730	chr14:93939334-93976730	0	-	93939334	93939334	8553170	3	232,50,297,	0,25228,37099,
#Partially deleted in new
chr14	93939554	93944129	chr14:93939554-93944129	3	+	93939554	93939554	8553170	5	48,74,130,60,241,	0,1647,2008,2645,4334,
#Deleted in new
chr14	93948225	93948302	chr14:93948225-93948302	3	-	93948225	93948225	5263520	1	77,	0,
#Deleted in new
chr14	93951009	93955271	chr14:93951009-93955271	0	-	93951009	93955112	789624	3	235,167,164,	0,3307,4098,
#Partially deleted in new
chr14	93953404	93976719	chr14:93953404-93976719	0	-	93953404	93956830	789624	4	103,167,105,286,	0,912,3361,23029,
#Deleted in new
chr14	93954190	93957049	chr14:93954190-93957049	0	-	93954190	93954190	8553170	2	293,284,	0,2575,
#Partially deleted in new
chr14	93954322	93974083	chr14:93954322-93974083	0	-	93954322	93964539	789624	3	161,279,136,	0,10011,19625,
#Deleted in new
chr14	93968254	93976739	chr14:93968254-93976739	0	-	93968254	93968254	8553170	3	39,51,306,	0,1665,8179,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	93987224	94007546	chr14:93987224-94007546	1	+	93998131	94007064	789624	8	172,89,121,83,179,132,117,536,	0,9980,10890,12358,13920,15998,17630,19786,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	93997269	94007552	chr14:93997269-94007552	0	+	93998131	93999627	789624	9	24,237,124,83,100,578,132,117,542,	0,729,2067,2313,3561,3875,5953,7585,9741,
#Partially deleted in new
chr14	93997273	94001223	chr14:93997273-94001223	0	+	93997273	93997273	8553170	5	20,121,124,83,79,	0,841,2063,2309,3871,
#Partially deleted in new
chr14	93997295	94008863	chr14:93997295-94008863	0	+	93998131	94003292	789624	7	276,237,83,175,132,117,255,	0,703,2287,3849,5927,7559,11313,
#Partially deleted in new
chr14	93997295	94008863	chr14:93997295-94008863	3	+	93998131	94008812	789624	7	276,237,83,179,132,117,255,	0,703,2287,3849,5927,7559,11313,
#Deleted in new
chr14	93997339	93999460	chr14:93997339-93999460	0	+	93997339	93997339	8553170	3	232,121,124,	0,775,1997,
#Partially deleted in new
chr14	94026328	94048930	chr14:94026328-94048930	3	+	94026537	94045922	0	6	212,96,119,85,195,3215,	0,11051,12634,17642,18257,19387,
#Partially deleted in new
chr14	94026377	94039411	chr14:94026377-94039411	1	+	94026537	94039085	0	3	163,96,449,	0,11002,12585,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	94048290	94081245	chr14:94048290-94081245	3	-	94051190	94079742	789624	9	3172,130,189,76,516,154,525,723,127,	0,4707,6705,9531,11807,12622,13806,30734,32828,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	94050919	94081198	chr14:94050919-94081198	0	-	94050919	94050919	8553170	8	543,130,2902,516,154,525,723,80,	0,2078,4076,9178,9993,11177,28105,30199,
#Deleted in new
chr14	94050921	94051824	chr14:94050921-94051824	0	-	94050921	94050921	8553170	2	541,77,	0,826,
#Partially deleted in new
chr14	94050921	94056163	chr14:94050921-94056163	0	-	94050921	94050921	8553170	2	338,148,	0,5094,
#Partially deleted in new
chr14	94050922	94081202	chr14:94050922-94081202	1	-	94051190	94062589	789624	8	540,130,189,76,516,154,525,84,	0,2075,4073,6899,9175,9990,11174,30196,
#Partially deleted in new
chr14	94050937	94081183	chr14:94050937-94081183	1	-	94051190	94079742	789624	10	525,130,189,76,516,154,525,45,513,65,	0,2060,4058,6884,9160,9975,11159,28087,28297,30181,
#Partially deleted in new
chr14	94050952	94062253	chr14:94050952-94062253	1	-	94051190	94062219	789624	8	510,130,189,76,516,154,106,49,	0,2045,4043,6869,9145,9960,11144,11252,
#Partially deleted in new
chr14	94050964	94081202	chr14:94050964-94081202	1	-	94051190	94079613	789624	9	498,130,189,76,516,154,525,597,84,	0,2033,4031,6857,9133,9948,11132,28060,30154,
#Partially deleted in new
chr14	94051019	94081212	chr14:94051019-94081212	1	-	94051019	94062589	789624	10	50,123,130,189,76,516,154,525,723,94,	0,320,1978,3976,6802,9078,9893,11077,28005,30099,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	94051187	94053378	chr14:94051187-94053378	0	-	94051187	94051187	8553170	2	275,381,	0,1810,
#Partially deleted in new
chr14	94078965	94081146	chr14:94078965-94081146	0	-	94078965	94078965	8553170	2	782,28,	0,2153,
#Partially deleted in new
chr14	94081281	94102714	chr14:94081281-94102714	3	+	94096937	94102568	0	5	168,79,33,162,238,	0,15605,19457,20532,21195,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	94081300	94103846	chr14:94081300-94103846	0	+	94081300	94081300	8553170	3	149,79,344,	0,15586,22202,
#Partially deleted in new
chr14	94081310	94101348	chr14:94081310-94101348	0	+	94081310	94081310	8553170	3	139,79,610,	0,15576,19428,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	94081328	94102709	chr14:94081328-94102709	1	+	94096937	94102568	0	5	121,125,33,162,233,	0,15512,19410,20485,21148,
#Partially deleted in new
chr14	94081355	94102536	chr14:94081355-94102536	0	+	94097653	94102536	789624	6	94,79,187,33,162,60,	0,15531,16136,19383,20458,21121,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	94081355	94089299	chr14:94081355-94089299	0	+	94081355	94081355	8553170	3	94,56,256,	0,6892,7688,
#Partially deleted in new
chr14	94081355	94102641	chr14:94081355-94102641	1	+	94097653	94102031	789624	6	94,79,187,33,246,165,	0,15531,16136,19383,20458,21121,
#Partially deleted in new
chr14	94081364	94102708	chr14:94081364-94102708	1	+	94088287	94102504	789624	6	85,56,79,33,162,232,	0,6883,15522,19374,20449,21112,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	94081374	94102541	chr14:94081374-94102541	0	+	94097653	94102541	789624	6	75,110,184,33,162,65,	0,15481,16120,19364,20439,21102,
#Partially deleted in new
chr14	94081381	94102709	chr14:94081381-94102709	1	+	94096937	94102568	789624	4	68,79,33,233,	0,15505,19357,21095,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	94081386	94102709	chr14:94081386-94102709	1	+	94096937	94102568	789624	3	63,110,233,	0,15469,21090,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	94081395	94102709	chr14:94081395-94102709	1	+	94096937	94102568	789624	5	54,150,110,33,233,	0,13354,15460,19343,21081,
#Partially deleted in new
chr14	94096906	94102709	chr14:94096906-94102709	1	+	94096937	94102031	789624	4	59,33,246,233,	0,3832,4907,5570,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	94104835	94115854	chr14:94104835-94115854	0	+	94111682	94115854	789624	6	199,154,120,115,30,74,	0,929,5842,6823,10015,10945,
#Partially deleted in new
chr14	94110732	94116698	chr14:94110732-94116698	3	+	94111682	94116527	789624	6	65,53,149,30,162,257,	0,193,892,4118,5048,5709,
#Partially deleted in new
chr14	94110733	94116690	chr14:94110733-94116690	1	+	94115788	94116527	789624	4	64,30,162,249,	0,4117,5047,5708,
#Deleted in new
chr14	94110735	94112133	chr14:94110735-94112133	0	+	94110735	94110735	8553170	2	62,509,	0,889,
#Deleted in new
chr14	94110735	94112194	chr14:94110735-94112194	0	+	94110735	94110735	8553170	2	62,536,	0,923,
#Partially deleted in new
chr14	94110738	94115839	chr14:94110738-94115839	0	+	94111682	94115839	789624	4	23,115,30,59,	0,920,4112,5042,
#Partially deleted in new
chr14	94110746	94116447	chr14:94110746-94116447	0	+	94111682	94116447	789624	5	51,115,30,162,6,	0,912,4104,5034,5695,
#Partially deleted in new
chr14	94110748	94116695	chr14:94110748-94116695	1	+	94111682	94116527	789624	5	49,149,30,162,254,	0,876,4102,5032,5693,
#Partially deleted in new
chr14	94110754	94114880	chr14:94110754-94114880	0	+	94111682	94114880	789624	4	43,53,149,30,	0,171,870,4096,
#Partially deleted in new
chr14	94110761	94116693	chr14:94110761-94116693	1	+	94111682	94116527	789624	4	36,149,162,252,	0,863,5019,5680,
#Partially deleted in new
chr14	94110814	94116695	chr14:94110814-94116695	1	+	94111682	94116527	789624	5	164,115,30,162,254,	0,844,4036,4966,5627,
#Partially deleted in new
chr14	94110814	94116698	chr14:94110814-94116698	1	+	94111682	94116527	789624	5	164,115,30,153,257,	0,844,4036,4975,5627,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	94112850	94116688	chr14:94112850-94116688	0	+	94112850	94112850	8553170	3	2030,162,247,	0,2930,3591,
#Deleted in new
chr14	94114850	94116694	chr14:94114850-94116694	0	+	94114850	94116212	789624	4	30,162,221,253,	0,930,1223,1591,
#Deleted in new
chr14	94115510	94116690	chr14:94115510-94116690	0	+	94115510	94115510	8553170	2	432,249,	0,931,
#Partially deleted in new
chr14	94127778	94129401	chr14:94127778-94129401	0	-	94127778	94127778	8553170	3	214,162,140,	0,735,1483,
#Partially deleted in new
chr14	94127780	94129664	chr14:94127780-94129664	3	-	94127798	94129564	789624	4	212,162,30,107,	0,733,1481,1777,
#Partially deleted in new
chr14	94127780	94128977	chr14:94127780-94128977	0	-	94127780	94127780	8553170	2	212,464,	0,733,
#Partially deleted in new
chr14	94127788	94130253	chr14:94127788-94130253	1	-	94127798	94128637	789624	4	204,162,30,160,	0,725,1473,2305,
#Partially deleted in new
chr14	94127848	94129589	chr14:94127848-94129589	0	-	94127848	94127848	8553170	2	144,328,	0,1413,
#Deleted in new
chr14	94128376	94129580	chr14:94128376-94129580	0	-	94128376	94128376	8553170	2	915,23,	0,1181,
#Partially deleted in new
chr14	94146127	94230619	chr14:94146127-94230619	0	+	94208515	94230619	789624	6	181,69,74,103,104,33,	0,21416,29926,62336,81147,84459,
#Partially deleted in new
chr14	94174311	94279735	chr14:94174311-94279735	3	+	94174465	94278643	789624	25	271,74,103,148,74,107,108,122,123,170,120,78,84,183,106,148,145,42,75,70,87,94,71,148,1117,	0,1742,34152,56275,56930,59341,60250,63253,66361,67476,67977,70323,71275,72045,75860,77437,82148,84471,84983,90566,91075,91482,92647,101062,104307,
#Partially deleted in new
chr14	94174311	94230714	chr14:94174311-94230714	0	+	94174311	94174311	8553170	5	271,74,103,104,128,	0,1742,34152,52963,56275,
#Partially deleted in new
chr14	94174337	94227846	chr14:94174337-94227846	1	+	94174465	94227354	789624	5	245,74,103,93,361,	0,1716,34126,52948,53148,
#Partially deleted in new
chr14	94175460	94230706	chr14:94175460-94230706	0	+	94208515	94230706	789624	4	267,74,103,120,	0,593,33003,55126,
#Partially deleted in new
chr14	94175779	94233718	chr14:94175779-94233718	0	+	94208515	94233718	789624	6	124,74,103,148,74,66,	0,274,32684,54807,55462,57873,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	94280454	94293271	chr14:94280454-94293271	3	-	94283964	94290593	0	5	3702,151,274,768,83,	0,5653,7831,9421,12734,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	94283312	94293097	chr14:94283312-94293097	1	-	94283964	94292678	789624	5	844,151,274,768,489,	0,2795,4973,6563,9296,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	94283314	94293024	chr14:94283314-94293024	1	-	94283964	94290593	0	5	842,151,274,768,416,	0,2793,4971,6561,9294,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	94283354	94290648	chr14:94283354-94290648	1	-	94283964	94290593	0	4	802,151,274,773,	0,2753,4931,6521,
#Partially deleted in new
chr14	94304247	94323319	chr14:94304247-94323319	0	-	94309931	94314648	789624	5	356,148,271,781,53,	0,1823,5488,9639,19019,
#Partially deleted in new
chr14	94304248	94323394	chr14:94304248-94323394	3	-	94304417	94314648	0	5	355,148,271,632,128,	0,1822,5487,9787,19018,
#Partially deleted in new
chr14	94314239	94323389	chr14:94314239-94323389	0	-	94314239	94314648	789624	2	596,123,	0,9027,
#Partially deleted in new
chr14	94364312	94366698	chr14:94364312-94366698	3	-	94364312	94366698	789624	2	276,655,	0,1731,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	94376746	94390692	chr14:94376746-94390692	1	-	94378448	94383237	0	5	1894,148,271,650,273,	0,2717,4124,5845,13673,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	94376746	94390692	chr14:94376746-94390692	1	-	94378448	94383237	0	6	1894,148,271,650,104,273,	0,2717,4124,5845,11813,13673,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	94376746	94390637	chr14:94376746-94390637	1	-	94378448	94383237	0	5	1894,148,271,650,181,	0,2717,4124,5845,13710,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	94376746	94390692	chr14:94376746-94390692	3	-	94378448	94383237	0	7	1894,148,271,650,104,192,273,	0,2717,4124,5845,11813,12072,13673,
#Partially deleted in new
chr14	94378348	94388820	chr14:94378348-94388820	1	-	94378448	94383237	0	5	292,148,271,650,261,	0,1115,2522,4243,10211,
#Partially deleted in new
chr14	94378372	94383246	chr14:94378372-94383246	0	-	94380866	94383237	0	4	268,148,491,655,	0,1091,2278,4219,
#Partially deleted in new
chr14	94378372	94388847	chr14:94378372-94388847	1	-	94378448	94383237	0	6	268,148,271,650,101,47,	0,1091,2498,4219,10187,10428,
#Partially deleted in new
chr14	94378375	94390693	chr14:94378375-94390693	1	-	94378448	94383237	0	7	265,148,271,650,104,210,237,	0,1088,2495,4216,10184,10425,12081,
#Partially deleted in new
chr14	94378388	94390662	chr14:94378388-94390662	1	-	94378448	94383237	0	6	252,148,271,650,101,206,	0,1075,2482,4203,10171,12068,
#Partially deleted in new
chr14	94378448	94390650	chr14:94378448-94390650	1	-	94378448	94383237	0	6	192,148,271,650,104,194,	0,1015,2422,4143,10111,12008,
#Partially deleted in new
chr14	94379112	94388589	chr14:94379112-94388589	1	-	94379448	94383237	0	4	499,271,650,30,	0,1758,3479,9447,
#Partially deleted in new
chr14	94382662	94388665	chr14:94382662-94388665	0	-	94382662	94382979	789624	2	340,106,	0,5897,
#Partially deleted in new
chr14	94382768	94388591	chr14:94382768-94388591	0	-	94382768	94383237	789624	2	611,32,	0,5791,
#Partially deleted in new
chr14	94382803	94390676	chr14:94382803-94390676	0	-	94382803	94383237	789624	4	438,101,192,220,	0,5756,6015,7653,
#Partially deleted in new
chr14	94382886	94390635	chr14:94382886-94390635	0	-	94382886	94383237	789624	2	355,216,	0,7533,
#Partially deleted in new
chr14	94382959	94390614	chr14:94382959-94390614	0	-	94382959	94383237	789624	3	282,104,195,	0,5600,7460,
#Partially deleted in new
chr14	94383170	94390635	chr14:94383170-94390635	0	-	94383170	94383237	789624	4	71,104,192,216,	0,5389,5648,7249,
#Partially deleted in new
chr14	94383628	94390635	chr14:94383628-94390635	0	-	94383628	94383628	8553170	5	19,97,104,210,179,	0,405,4931,5172,6828,
#Partially deleted in new
chr14	94388609	94390635	chr14:94388609-94390635	0	-	94388609	94388609	8553170	2	401,179,	0,1847,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	94389556	94390635	chr14:94389556-94390635	0	-	94389556	94389556	8553170	2	389,179,	0,900,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	94430632	94464730	chr14:94430632-94464730	3	+	94430632	94430632	8553170	3	44,127,397,	0,982,33701,
#Partially deleted in new
chr14	94442463	94452790	chr14:94442463-94452790	3	-	94442605	94448774	789624	5	346,148,274,646,62,	0,614,3867,5668,10265,
#Partially deleted in new
chr14	94462716	94476211	chr14:94462716-94476211	1	-	94463092	94476172	789624	6	580,148,274,112,233,76,	0,1990,4392,6496,6908,13419,
#Partially deleted in new
chr14	94462716	94476243	chr14:94462716-94476243	1	-	94463092	94469447	789624	6	580,148,274,254,98,108,	0,1990,4392,6496,7371,13419,
#Partially deleted in new
chr14	94462716	94476198	chr14:94462716-94476198	1	-	94463092	94469600	789624	5	580,148,274,455,63,	0,1990,4392,6496,13419,
#Partially deleted in new
chr14	94462720	94476247	chr14:94462720-94476247	3	-	94463092	94476172	789624	5	576,148,274,645,112,	0,1986,4388,6492,13415,
#Partially deleted in new
chr14	94463092	94475985	chr14:94463092-94475985	1	-	94463092	94469840	789624	5	204,148,274,645,62,	0,1614,4016,6120,12831,
#Partially deleted in new
chr14	94464625	94476333	chr14:94464625-94476333	0	-	94469370	94476254	789624	4	229,274,645,198,	0,2483,4587,11510,
#Partially deleted in new
chr14	94464625	94476333	chr14:94464625-94476333	1	-	94464697	94476254	789624	4	229,274,455,198,	0,2483,4587,11510,
#Partially deleted in new
chr14	94469752	94479689	chr14:94469752-94479689	0	-	94469752	94469752	8553170	2	105,475,	0,9462,
#Partially deleted in new
chr14	94487273	94504222	chr14:94487273-94504222	1	-	94487302	94498397	0	5	221,148,271,667,190,	0,2346,9099,10490,16759,
#Partially deleted in new
chr14	94487282	94517844	chr14:94487282-94517844	3	-	94487302	94498397	0	6	212,148,271,651,335,444,	0,2337,9090,10481,28537,30118,
#Partially deleted in new
chr14	94561090	94569902	chr14:94561090-94569902	3	+	94563482	94569595	789624	5	404,666,274,160,508,	0,2375,5879,7038,8304,
#Partially deleted in new
chr14	94561441	94592796	chr14:94561441-94592796	3	+	94587362	94592239	0	7	53,126,97,636,271,148,740,	0,17264,18992,25904,28599,29307,30615,
#Partially deleted in new
chr14	94561441	94587878	chr14:94561441-94587878	0	+	94587362	94587878	789624	2	53,533,	0,25904,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	94561441	94569913	chr14:94561441-94569913	1	+	94563482	94569595	789624	5	368,666,274,160,519,	0,2024,5528,6687,7953,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	94561446	94569870	chr14:94561446-94569870	1	+	94563482	94569595	789624	5	208,666,274,160,476,	0,2019,5523,6682,7948,
#Partially deleted in new
chr14	94581368	94593120	chr14:94581368-94593120	1	+	94587362	94592239	0	6	122,96,636,271,148,1064,	0,246,5977,8672,9380,10688,
#Partially deleted in new
chr14	94581390	94590767	chr14:94581390-94590767	0	+	94581390	94581390	8553170	3	100,636,727,	0,5955,8650,
#Partially deleted in new
chr14	94581393	94590324	chr14:94581393-94590324	0	+	94587362	94590324	789624	4	97,96,636,284,	0,221,5952,8647,
#Partially deleted in new
chr14	94581393	94593115	chr14:94581393-94593115	1	+	94587362	94592239	0	5	97,636,271,148,1059,	0,5952,8647,9355,10663,
#Partially deleted in new
chr14	94581396	94590115	chr14:94581396-94590115	0	+	94587362	94590115	789624	4	94,24,636,75,	0,218,5949,8644,
#Partially deleted in new
chr14	94581425	94587634	chr14:94581425-94587634	0	+	94587362	94587634	789624	2	285,289,	0,5920,
#Partially deleted in new
chr14	94581466	94587620	chr14:94581466-94587620	0	+	94587362	94587620	789624	4	24,96,138,275,	0,148,5379,5879,
#Partially deleted in new
chr14	94581470	94587795	chr14:94581470-94587795	0	+	94587362	94587795	789624	2	168,450,	0,5875,
#Partially deleted in new
chr14	94581614	94593115	chr14:94581614-94593115	1	+	94587362	94592239	0	5	96,636,271,148,1059,	0,5731,8426,9134,10442,
#Partially deleted in new
chr14	94581879	94587833	chr14:94581879-94587833	0	+	94587362	94587833	789624	2	119,488,	0,5466,
#Partially deleted in new
chr14	94581970	94587435	chr14:94581970-94587435	0	+	94587362	94587435	789624	2	372,90,	0,5375,
#Partially deleted in new
chr14	94592057	94624646	chr14:94592057-94624646	3	+	94592057	94596312	789624	8	79,603,122,151,651,274,151,1036,	0,4197,6032,20239,22376,27137,30283,31553,
#Partially deleted in new
chr14	94612376	94624052	chr14:94612376-94624052	3	+	94614441	94623814	0	5	71,651,274,151,442,	0,2057,6818,9964,11234,
#Partially deleted in new
chr14	94612383	94624055	chr14:94612383-94624055	1	+	94614441	94623814	0	5	60,651,274,151,445,	0,2050,6811,9957,11227,
#Deleted in new
chr14	94612383	94613857	chr14:94612383-94613857	0	+	94612383	94612383	8553170	2	64,511,	0,963,
#Partially deleted in new
chr14	94612389	94619468	chr14:94612389-94619468	0	+	94614441	94619468	789624	3	58,649,274,	0,2046,6805,
#Partially deleted in new
chr14	94612390	94624054	chr14:94612390-94624054	1	+	94614441	94623814	0	5	53,1738,274,151,444,	0,956,6804,9950,11220,
#Partially deleted in new
chr14	94612390	94622763	chr14:94612390-94622763	0	+	94612390	94612390	8553170	2	57,423,	0,9950,
#Partially deleted in new
chr14	94612404	94624054	chr14:94612404-94624054	0	+	94614441	94622348	0	4	43,651,151,444,	0,2029,9936,11206,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	94617641	94624052	chr14:94617641-94624052	1	+	94619205	94623814	789624	3	1827,151,442,	0,4699,5969,
#Deleted in new
chr14	94619332	94619971	chr14:94619332-94619971	0	+	94619332	94619472	789624	1	639,	0,
#Deleted in new
chr14	94633704	94634524	chr14:94633704-94634524	7	+	94633704	94633704	16724991	1	820,	0,
#Deleted in new
chr14	94640724	94646994	chr14:94640724-94646994	7	+	94640724	94640724	16724991	5	242,600,271,121,484,	0,576,2744,4232,5786,
#Deleted in new
chr14	94641317	94645026	chr14:94641317-94645026	5	+	94641317	94641317	16724991	3	583,271,70,	0,2151,3639,
#Partially deleted in new
chr14	94674876	94675829	chr14:94674876-94675829	7	-	94674876	94674876	16724991	2	109,548,	0,405,
#Deleted in new
chr14	94726287	94727175	chr14:94726287-94727175	7	+	94726287	94726287	16724991	1	888,	0,
#Deleted in new
chr14	94768215	94770230	chr14:94768215-94770230	3	-	94768490	94770015	0	3	434,260,570,	0,742,1445,
#Deleted in new
chr14	94770270	94774858	chr14:94770270-94774858	3	+	94770270	94770270	8553170	1	4588,	0,
#Deleted in new
chr14	94800848	94801463	chr14:94800848-94801463	7	-	94800848	94800848	16724991	1	615,	0,
#Deleted in new
chr14	94918252	94918734	chr14:94918252-94918734	3	-	94918252	94918252	8553170	1	482,	0,
#Partially deleted in new
chr14	94960276	94962976	chr14:94960276-94962976	3	-	94960276	94960276	8553170	5	212,72,83,272,98,	0,1633,1961,2232,2602,
#Partially deleted in new
chr14	95048219	95050953	chr14:95048219-95050953	3	+	95048219	95048219	8553170	2	41,424,	0,2310,
#Partially deleted in new
chr14	95086227	95157422	chr14:95086227-95157422	1	-	95090497	95133458	0	27	4436,76,163,269,889,156,781,176,106,183,154,214,180,140,76,133,155,243,133,473,169,161,135,131,163,189,193,	0,4806,4975,7660,9597,13552,17118,18843,19450,19813,21380,21652,22096,25089,25944,26864,29439,30225,31394,37968,40352,43244,43830,45281,46287,47087,71002,
#Partially deleted in new
chr14	95086227	95158010	chr14:95086227-95158010	3	-	95090497	95133458	0	29	4436,76,163,269,889,156,781,176,106,183,154,214,180,140,76,133,155,243,133,473,169,161,135,131,163,189,101,66,80,	0,4806,4975,7660,9597,13552,17118,18843,19450,19813,21380,21652,22096,25089,25944,26864,29439,30225,31394,37968,40352,43244,43830,45281,46287,47087,54431,55455,71703,
#Partially deleted in new
chr14	95086228	95141718	chr14:95086228-95141718	1	-	95090497	95133458	0	28	4435,76,163,269,889,156,781,176,106,183,154,214,180,140,76,133,155,243,133,473,169,161,135,131,163,189,101,36,	0,4805,4974,7659,9596,13551,17117,18842,19449,19812,21379,21651,22095,25088,25943,26863,29438,30224,31393,37967,40351,43243,43829,45280,46286,47086,54430,55454,
#Deleted in new
chr14	95088664	95091322	chr14:95088664-95091322	0	-	95088664	95088664	8553170	4	344,151,76,120,	0,1848,2369,2538,
#Partially deleted in new
chr14	95090320	95136810	chr14:95090320-95136810	1	-	95090497	95133458	0	27	343,76,163,269,889,156,781,176,106,183,154,214,180,140,76,133,155,243,133,473,169,161,135,131,163,189,188,	0,713,882,3567,5504,9459,13025,14750,15357,15720,17287,17559,18003,20996,21851,22771,25346,26132,27301,33875,36259,39151,39737,41188,42194,42994,46302,
#Partially deleted in new
chr14	95090467	95106081	chr14:95090467-95106081	1	-	95090497	95105110	0	10	196,76,163,269,889,156,704,176,106,41,	0,566,735,3420,5357,9312,12878,14603,15210,15573,
#Partially deleted in new
chr14	95090491	95133467	chr14:95090491-95133467	1	-	95090613	95133458	0	25	172,76,269,889,156,781,176,106,183,154,214,180,140,76,133,155,243,133,473,169,161,135,131,163,153,	0,542,3396,5333,9288,12854,14579,15186,15549,17116,17388,17832,20825,21680,22600,25175,25961,27130,33704,36088,38980,39566,41017,42023,42823,
#Deleted in new
chr14	95090664	95091422	chr14:95090664-95091422	0	-	95090664	95090664	8553170	2	445,220,	0,538,
#Partially deleted in new
chr14	95095345	95103430	chr14:95095345-95103430	0	-	95095771	95103430	789624	3	1368,156,85,	0,4434,8000,
#Deleted in new
chr14	95103707	95106236	chr14:95103707-95106236	0	-	95103707	95103707	8553170	4	419,176,106,196,	0,1363,1970,2333,
#Partially deleted in new
chr14	95106079	95107773	chr14:95106079-95107773	0	-	95106079	95106079	8553170	2	144,166,	0,1528,
#Partially deleted in new
chr14	95113129	95124275	chr14:95113129-95124275	0	-	95113129	95113129	8553170	5	95,155,128,133,80,	0,2537,3323,4492,11066,
#Partially deleted in new
chr14	95129060	95157486	chr14:95129060-95157486	0	-	95129060	95129060	8553170	6	572,135,131,163,189,96,	0,997,2448,3454,4254,28330,
#Partially deleted in new
chr14	95132610	95157270	chr14:95132610-95157270	0	-	95132610	95133458	789624	6	67,189,101,34,66,41,	0,704,8048,8543,9072,24619,
#Partially deleted in new
chr14	95132610	95157270	chr14:95132610-95157270	0	-	95132610	95133458	789624	6	67,189,143,101,66,41,	0,704,1750,8048,9072,24619,
#Deleted in new
chr14	95137918	95137986	chr14:95137918-95137986	3	-	95137918	95137918	5263520	1	68,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	95157644	95179933	chr14:95157644-95179933	3	+	95157644	95157644	8553170	3	1391,135,183,	0,21854,22106,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	95157677	95179925	chr14:95157677-95179925	1	+	95157677	95157677	789624	4	181,42,160,427,	0,515,1198,21821,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	95157759	95179925	chr14:95157759-95179925	1	+	95157759	95157759	8553170	4	99,42,160,422,	0,433,1116,21744,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	95177482	95179925	chr14:95177482-95179925	1	+	95177482	95177482	8553170	2	1896,427,	0,2016,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr14	95181939	95319906	chr14:95181939-95319906	3	-	95191563	95319792	789624	13	9793,71,61,197,1626,83,194,191,93,84,96,62,196,	0,11909,12596,14558,20898,27455,28746,31279,33701,39751,41820,48132,137771,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	95185116	95185854	chr14:95185116-95185854	3	-	95185116	95185116	8553170	2	224,370,	0,368,
#Partially deleted in new
chr14	95191526	95194395	chr14:95191526-95194395	0	-	95191526	95191526	8553170	3	206,128,181,	0,2322,2688,
#Partially deleted in new
chr14	95191526	95196584	chr14:95191526-95196584	0	-	95191526	95191526	8553170	4	206,71,382,87,	0,2322,2688,4971,
#Partially deleted in new
chr14	95191529	95210851	chr14:95191529-95210851	0	-	95191529	95191529	8553170	6	203,748,197,1626,83,166,	0,2319,4968,11308,17865,19156,
#Partially deleted in new
chr14	95191530	95194300	chr14:95191530-95194300	1	-	95191563	95193357	789624	4	198,97,71,86,	0,1788,2318,2684,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	95191712	95193917	chr14:95191712-95193917	0	-	95191712	95191712	8553170	2	1703,69,	0,2136,
#Deleted in new
chr14	95199038	95199345	chr14:95199038-95199345	7	+	95199038	95199038	16724991	2	70,111,	0,196,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	95213224	95296243	chr14:95213224-95296243	0	-	95213224	95223795	789624	7	185,93,84,96,62,88,110,	0,2416,8466,10535,16847,47290,82909,
#Partially deleted in new
chr14	95213319	95307773	chr14:95213319-95307773	0	-	95213319	95223795	789624	6	90,93,84,96,62,260,	0,2321,8371,10440,16752,94194,
#Partially deleted in new
chr14	95221732	95319878	chr14:95221732-95319878	0	-	95222545	95319792	789624	5	42,197,96,62,168,	0,670,2027,8339,97978,
#Partially deleted in new
chr14	95329583	95335504	chr14:95329583-95335504	3	+	95329583	95329583	789624	3	85,140,1476,	0,3061,4445,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr14	95407265	95475836	chr14:95407265-95475836	1	-	95417825	95475821	789624	17	10761,39,150,147,130,173,162,135,144,183,175,137,348,162,310,173,159,	0,24813,25994,29554,31767,32346,32648,35889,37219,38643,42665,44981,48111,49911,58665,60529,68412,
#Partially deleted in new
chr14	95417493	95475836	chr14:95417493-95475836	3	-	95417825	95475821	789624	17	533,39,150,162,130,173,162,135,144,183,175,137,348,162,310,173,159,	0,14585,15766,19326,21539,22118,22420,25661,26991,28415,32437,34753,37883,39683,48437,50301,58184,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr14	95417603	95456189	chr14:95417603-95456189	1	-	95417825	95455784	789624	13	423,39,150,162,130,173,162,135,144,183,175,137,813,	0,14475,15656,19216,21429,22008,22310,25551,26881,28305,32327,34643,37773,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	95437801	95467856	chr14:95437801-95467856	0	-	95437801	95437801	8553170	11	1361,173,162,135,144,183,2453,348,162,310,62,	0,1810,2112,5353,6683,8107,12129,17575,19375,28129,29993,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	95443660	95475836	chr14:95443660-95475836	1	-	95444469	95475821	789624	9	968,183,175,137,348,162,310,173,159,	0,2248,6270,8586,11716,13516,22270,24134,32017,
#Deleted in new
chr14	95516135	95517911	chr14:95516135-95517911	3	+	95516135	95516135	8553170	2	85,908,	0,868,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	95532296	95534800	chr14:95532296-95534800	3	-	95532296	95532296	8553170	2	765,766,	0,1738,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	95532633	95534245	chr14:95532633-95534245	0	-	95532633	95532633	8553170	2	428,553,	0,1059,
#Partially deleted in new
chr14	95532913	95534872	chr14:95532913-95534872	0	-	95532913	95532913	8553170	2	148,280,	0,1679,
#Partially deleted in new
chr14	95532913	95534586	chr14:95532913-95534586	0	-	95532913	95532913	8553170	2	148,73,	0,1600,
#Deleted in new
chr14	95533354	95533629	chr14:95533354-95533629	3	-	95533354	95533354	789624	1	275,	0,
#Partially deleted in new
chr14	95533502	95544557	chr14:95533502-95544557	0	+	95533502	95533502	8553170	2	301,611,	0,10444,
#Partially deleted in new
chr14	95534592	95544718	chr14:95534592-95544718	3	+	95535089	95544125	0	2	792,772,	0,9354,
#Partially deleted in new
chr14	95535273	95544724	chr14:95535273-95544724	0	+	95535273	95543273	789624	2	111,1752,	0,7699,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	95573604	95578684	chr14:95573604-95578684	1	+	95573604	95573604	789624	2	78,1256,	0,3824,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	95620913	95643285	chr14:95620913-95643285	3	+	95620913	95620913	8553170	4	120,196,130,1268,	0,19039,20827,21104,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	95644507	95645232	chr14:95644507-95645232	3	+	95644507	95644507	8553170	1	725,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	95650497	95671560	chr14:95650497-95671560	0	+	95650497	95650497	8553170	9	532,182,113,118,185,380,67,136,226,	0,1547,1879,4011,11982,12758,19053,19944,20837,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	95650500	95654647	chr14:95650500-95654647	1	+	95650500	95650500	8553170	4	529,130,113,139,	0,1596,1876,4008,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	95651177	95673452	chr14:95651177-95673452	1	+	95651177	95651177	789624	8	1049,113,118,185,67,136,157,1482,	0,1199,3331,11302,18373,19264,20153,20793,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	95651177	95671850	chr14:95651177-95671850	1	+	95651177	95651177	8553170	8	1049,113,118,380,67,136,157,174,	0,1199,3331,12078,18373,19264,20153,20499,
#Deleted in new
chr14	95652376	95652489	chr14:95652376-95652489	0	+	95652376	95652376	8553170	1	113,	0,
#Deleted in new
chr14	95662479	95662598	chr14:95662479-95662598	3	+	95662479	95662479	8553170	1	119,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	95663255	95679833	chr14:95663255-95679833	3	+	95663255	95663255	8553170	6	1821,455,67,136,157,762,	0,4870,6295,7186,8075,15816,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	95663255	95692628	chr14:95663255-95692628	3	+	95663255	95663255	8553170	8	1821,455,67,136,157,171,69,698,	0,4870,6295,7186,8075,27480,28012,28675,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	95663255	95673452	chr14:95663255-95673452	1	+	95663255	95663255	8553170	5	1821,67,136,157,1482,	0,6295,7186,8075,8715,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	95663255	95671850	chr14:95663255-95671850	0	+	95663255	95663255	8553170	5	1821,1492,136,157,174,	0,4870,7186,8075,8421,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	95663255	95692628	chr14:95663255-95692628	0	+	95663255	95663255	8553170	7	1821,67,136,157,171,69,698,	0,6295,7186,8075,27480,28012,28675,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	95663255	95692628	chr14:95663255-95692628	0	+	95663255	95663255	8553170	7	1821,455,136,157,171,69,698,	0,4870,7186,8075,27480,28012,28675,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	95663255	95679833	chr14:95663255-95679833	0	+	95663255	95663255	8553170	4	1821,1492,157,762,	0,4870,8075,15816,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	95663255	95692630	chr14:95663255-95692630	0	+	95663255	95663255	8553170	8	1821,67,136,157,96,171,69,700,	0,6295,7186,8075,24923,27480,28012,28675,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	95664861	95670414	chr14:95664861-95670414	0	+	95664861	95664861	8553170	2	215,2289,	0,3264,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	95669483	95678100	chr14:95669483-95678100	0	+	95669483	95669483	8553170	4	134,136,157,1651,	0,958,1847,6966,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	95670438	95678100	chr14:95670438-95678100	0	+	95670438	95670438	8553170	3	139,157,1651,	0,892,6011,
#Deleted in new
chr14	95670440	95670577	chr14:95670440-95670577	3	+	95670440	95670440	8553170	1	137,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	95670441	95677136	chr14:95670441-95677136	1	+	95670441	95670441	8553170	3	136,157,496,	0,889,6199,
#Partially deleted in new
chr14	95686416	95692643	chr14:95686416-95692643	3	+	95686467	95691321	789624	4	213,171,69,713,	0,4319,4851,5514,
#Partially deleted in new
chr14	95686437	95692628	chr14:95686437-95692628	0	+	95686437	95686437	8553170	3	192,171,1361,	0,4298,4830,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	95689284	95691356	chr14:95689284-95691356	0	+	95689284	95689284	8553170	3	122,171,89,	0,1451,1983,
#Partially deleted in new
chr14	95709966	95714196	chr14:95709966-95714196	3	-	95711754	95714066	0	4	915,49,177,250,	0,1787,2253,3980,
#Partially deleted in new
chr14	95709967	95714196	chr14:95709967-95714196	1	-	95711754	95714066	0	4	914,54,177,250,	0,1781,2252,3979,
#Partially deleted in new
chr14	95710055	95714098	chr14:95710055-95714098	1	-	95711754	95714066	0	4	494,49,177,152,	0,1698,2164,3891,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	95710175	95712722	chr14:95710175-95712722	1	-	95711754	95712333	789624	4	706,54,177,43,	0,1573,2044,2504,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	95710666	95714089	chr14:95710666-95714089	0	-	95712753	95714066	789624	3	215,555,143,	0,1553,3280,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	95710704	95714127	chr14:95710704-95714127	0	-	95712753	95714066	789624	5	177,54,177,224,181,	0,1044,1515,1846,3242,
#Partially deleted in new
chr14	95710722	95711962	chr14:95710722-95711962	0	-	95710722	95710722	8553170	2	159,209,	0,1031,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	95710766	95714104	chr14:95710766-95714104	0	-	95712753	95714066	789624	4	115,54,555,158,	0,982,1453,3180,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	95711446	95714130	chr14:95711446-95714130	1	-	95711754	95714066	0	3	356,177,184,	0,773,2500,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	95711746	95755667	chr14:95711746-95755667	0	+	95711746	95711746	8553170	3	152,98,423,	0,5724,43498,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	95711756	95755578	chr14:95711756-95755578	0	+	95711756	95711756	8553170	3	269,98,334,	0,5714,43488,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	95715479	95757656	chr14:95715479-95757656	3	+	95715479	95715479	8553170	3	228,98,2412,	0,1991,39765,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	95855547	95866405	chr14:95855547-95866405	3	-	95855547	95855547	8553170	2	430,376,	0,10482,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	95855747	95866464	chr14:95855747-95866464	0	-	95855747	95855747	8553170	2	230,285,	0,10432,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	95876391	95925562	chr14:95876391-95925562	3	+	95922819	95922966	789624	2	148,2782,	0,46389,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	95876771	95925571	chr14:95876771-95925571	1	+	95922819	95922966	789624	2	406,2791,	0,46009,
#Partially deleted in new
chr14	95876818	95923055	chr14:95876818-95923055	1	+	95922819	95922966	789624	3	359,133,275,	0,18992,45962,
#Deleted in new
chr14	96019483	96019765	chr14:96019483-96019765	7	+	96019483	96019483	16724991	1	282,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	96039323	96093889	chr14:96039323-96093889	3	+	96039500	96086735	789624	2	204,7379,	0,47187,
#Partially deleted in new
chr14	96039361	96086807	chr14:96039361-96086807	1	+	96051168	96086735	789624	3	166,99,297,	0,11762,47149,
#Partially deleted in new
chr14	96039371	96093887	chr14:96039371-96093887	1	+	96039500	96086735	789624	3	156,252,366,	0,47139,54150,
#Partially deleted in new
chr14	96039383	96086809	chr14:96039383-96086809	1	+	96039500	96086735	789624	3	144,93,299,	0,891,47127,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	96204678	96244166	chr14:96204678-96244166	1	+	96240409	96241504	789624	3	281,113,6451,	0,32390,33037,
#Partially deleted in new
chr14	96204794	96244164	chr14:96204794-96244164	3	+	96237107	96241504	789624	3	165,113,3762,	0,32274,35608,
#Partially deleted in new
chr14	96204838	96241607	chr14:96204838-96241607	1	+	96240409	96241504	789624	4	121,108,166,1205,	0,32235,34857,35564,
#Deleted in new
chr14	96210859	96214818	chr14:96210859-96214818	3	+	96210859	96210859	8553170	2	280,180,	0,3779,
#Deleted in new
chr14	96223107	96223347	chr14:96223107-96223347	7	+	96223107	96223107	16724991	1	240,	0,
#Deleted in new
chr14	96233430	96234101	chr14:96233430-96234101	3	-	96233430	96233430	8553170	2	428,144,	0,527,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	96259410	96268624	chr14:96259410-96268624	3	-	96259410	96259410	8553170	2	482,256,	0,8958,
#Deleted in new
chr14	96263669	96264754	chr14:96263669-96264754	1	+	96263682	96264744	789624	1	1085,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	96264825	96268455	chr14:96264825-96268455	0	+	96264825	96264825	8553170	2	530,26,	0,3604,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	96275045	96276723	chr14:96275045-96276723	3	-	96275045	96275045	8553170	1	1678,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	96275046	96276723	chr14:96275046-96276723	0	-	96275046	96275046	8553170	1	1677,	0,
#Boundary problem: need 42, got 0, diff 42, mapped 0.0
chr14	96279201	96363870	chr14:96279201-96363870	3	-	96285754	96362976	789624	42	6784,150,155,122,83,70,208,79,102,195,109,227,203,142,171,77,71,93,107,81,200,151,173,158,143,196,103,274,189,93,151,262,106,155,186,97,180,163,103,153,163,1056,	0,10454,11234,11612,12398,12827,15758,16280,22805,23859,25293,26387,27512,30251,31915,32340,32887,33863,34127,35952,36182,37331,37943,38496,42910,43338,44694,46447,49145,49472,50282,52174,53103,53299,54486,55203,62320,63917,65452,66031,67977,83613,
#Deleted in new
chr14	96289455	96290577	chr14:96289455-96290577	0	-	96289455	96289455	8553170	2	350,142,	0,980,
#Partially deleted in new
chr14	96290135	96311263	chr14:96290135-96311263	0	-	96290135	96290135	8553170	14	78,155,122,83,70,208,79,102,195,109,227,203,142,147,	0,300,678,1464,1893,4824,5346,11871,12925,14359,15453,16578,19317,20981,
#Deleted in new
chr14	96290569	96291938	chr14:96290569-96291938	0	-	96290569	96290569	8553170	3	21,122,339,	0,244,1030,
#Deleted in new
chr14	96292981	96295059	chr14:96292981-96295059	0	-	96292981	96292981	8553170	2	233,100,	0,1978,
#Partially deleted in new
chr14	96317147	96324178	chr14:96317147-96324178	0	-	96317147	96317147	8553170	4	170,196,103,81,	0,5392,6748,6950,
#Partially deleted in new
chr14	96317722	96322435	chr14:96317722-96322435	0	-	96317722	96317722	8553170	3	133,65,324,	0,511,4389,
#Partially deleted in new
chr14	96363451	96387286	chr14:96363451-96387286	3	+	96382247	96385684	789624	3	117,259,1764,	0,18795,22071,
#Partially deleted in new
chr14	96363476	96387288	chr14:96363476-96387288	1	+	96382247	96385684	789624	4	92,101,259,1766,	0,16211,18770,22046,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	96363525	96382481	chr14:96363525-96382481	0	+	96382247	96382481	789624	4	43,122,101,235,	0,15412,16162,18721,
#Partially deleted in new
chr14	96363525	96385912	chr14:96363525-96385912	1	+	96382247	96385684	789624	4	43,68,259,390,	0,16162,18721,21997,
#Partially deleted in new
chr14	96363525	96380292	chr14:96363525-96380292	0	+	96363525	96363525	8553170	2	43,605,	0,16162,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	96363556	96387286	chr14:96363556-96387286	1	+	96382247	96385684	789624	4	1710,101,259,1764,	0,16131,18690,21966,
#Partially deleted in new
chr14	96379701	96385591	chr14:96379701-96385591	0	+	96382247	96385591	789624	3	33,259,69,	0,2545,5821,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	96384623	96384815	chr14:96384623-96384815	3	+	96384623	96384623	8553170	1	192,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr14	96392110	96489427	chr14:96392110-96489427	3	+	96392154	96488343	789624	18	149,189,109,95,111,81,89,91,78,150,129,130,129,69,198,221,159,1123,	0,5964,12646,16736,28711,45724,50619,54406,57691,59310,64236,65972,79367,80576,86354,90888,94787,96194,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	96392132	96399292	chr14:96392132-96399292	1	+	96392154	96398293	789624	2	127,1218,	0,5942,
#Partially deleted in new
chr14	96392143	96405052	chr14:96392143-96405052	0	+	96392143	96392143	8553170	3	116,189,296,	0,5931,12613,
#Partially deleted in new
chr14	96398197	96421566	chr14:96398197-96421566	0	+	96398197	96398197	8553170	5	66,109,95,111,150,	0,6559,10649,22624,23219,
#Deleted in new
chr14	96423699	96424209	chr14:96423699-96424209	7	-	96423699	96423699	16724991	1	510,	0,
#Deleted in new
chr14	96456575	96457041	chr14:96456575-96457041	7	-	96456575	96456575	16724991	1	466,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	96482981	96488275	chr14:96482981-96488275	0	+	96482981	96488017	789624	3	238,159,318,	0,3916,4976,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	96500809	96502321	chr14:96500809-96502321	3	-	96500809	96500809	8553170	1	1512,	0,
#Partially deleted in new
chr14	96501432	96527496	chr14:96501432-96527496	0	+	96501432	96501432	8553170	5	157,174,67,82,67,	0,18622,19573,23877,25997,
#Partially deleted in new
chr14	96502372	96567111	chr14:96502372-96567111	3	+	96502592	96565050	789624	22	228,174,67,82,110,54,112,90,139,73,121,85,54,120,110,122,143,101,239,63,75,2157,	0,17682,18633,22937,25057,25580,29102,29958,30138,32118,33506,34603,39870,40401,41776,45424,50107,53474,53802,58276,60446,62582,
#Partially deleted in new
chr14	96502381	96532338	chr14:96502381-96532338	0	+	96502381	96525311	789624	6	219,82,110,54,112,8,	0,22928,25048,25571,29093,29949,
#Partially deleted in new
chr14	96502397	96565048	chr14:96502397-96565048	0	+	96502592	96531479	789624	20	203,174,67,82,112,90,139,73,121,85,54,120,110,122,143,101,239,63,75,94,	0,17657,18608,22912,29077,29933,30113,32093,33481,34578,39845,40376,41751,45399,50082,53449,53777,58251,60421,62557,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	96502400	96534885	chr14:96502400-96534885	1	+	96502592	96532671	789624	9	200,174,67,82,110,54,112,90,2375,	0,17654,18605,22909,25029,25552,29074,29930,30110,
#Partially deleted in new
chr14	96502411	96531728	chr14:96502411-96531728	0	+	96502411	96502411	8553170	6	189,174,67,110,54,254,	0,17643,18594,25018,25541,29063,
#Partially deleted in new
chr14	96502440	96532248	chr14:96502440-96532248	1	+	96502592	96531696	789624	7	160,174,67,82,110,54,774,	0,17614,18565,22869,24989,25512,29034,
#Partially deleted in new
chr14	96502541	96528002	chr14:96502541-96528002	0	+	96502592	96528002	789624	6	59,174,109,82,110,50,	0,17513,18422,22768,24888,25411,
#Partially deleted in new
chr14	96502557	96565428	chr14:96502557-96565428	1	+	96502592	96565050	789624	21	43,174,67,82,110,54,112,90,139,73,121,85,54,120,110,122,143,101,239,75,474,	0,17497,18448,22752,24872,25395,28917,29773,29953,31933,33321,34418,39685,40216,41591,45239,49922,53289,53617,60261,62397,
#Partially deleted in new
chr14	96502850	96564988	chr14:96502850-96564988	0	+	96532563	96564988	789624	22	104,174,67,82,110,54,112,90,139,73,121,85,54,120,110,122,143,101,239,63,75,34,	0,17204,18155,22459,24579,25102,28624,29480,29660,31640,33028,34125,39392,39923,41298,44946,49629,52996,53324,57798,59968,62104,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	96504288	96521072	chr14:96504288-96521072	0	+	96504288	96504288	8553170	3	411,174,67,	0,15766,16717,
#Partially deleted in new
chr14	96521015	96531731	chr14:96521015-96531731	0	+	96521015	96521015	8553170	4	57,82,54,257,	0,4294,6937,10459,
#Partially deleted in new
chr14	96521062	96532696	chr14:96521062-96532696	0	+	96521062	96521062	8553170	6	10,82,54,112,90,186,	0,4247,6890,10412,11268,11448,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	96525980	96531725	chr14:96525980-96531725	0	+	96525980	96525980	8553170	2	2026,251,	0,5494,
#Partially deleted in new
chr14	96527441	96534889	chr14:96527441-96534889	0	+	96527441	96534608	789624	6	98,54,112,90,139,399,	0,511,4033,4889,5069,7049,
#Deleted in new
chr14	96534222	96537059	chr14:96534222-96537059	0	+	96534222	96534222	8553170	3	341,121,84,	0,1656,2753,
#Deleted in new
chr14	96535524	96537047	chr14:96535524-96537047	0	+	96535524	96535524	8553170	2	475,72,	0,1451,
#Partially deleted in new
chr14	96536894	96547904	chr14:96536894-96547904	0	+	96536894	96536894	8553170	5	166,54,120,110,108,	0,5348,5879,7254,10902,
#Deleted in new
chr14	96537169	96537904	chr14:96537169-96537904	3	+	96537169	96537169	8553170	1	735,	0,
#Partially deleted in new
chr14	96541906	96552543	chr14:96541906-96552543	0	+	96541906	96541906	8553170	5	390,120,110,122,64,	0,867,2242,5890,10573,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	96542181	96553532	chr14:96542181-96553532	0	+	96542181	96542181	8553170	3	712,110,1053,	0,1967,10298,
#Partially deleted in new
chr14	96542728	96555950	chr14:96542728-96555950	0	+	96542728	96542728	8553170	5	165,110,122,143,104,	0,1420,5068,9751,13118,
#Partially deleted in new
chr14	96547687	96552983	chr14:96547687-96552983	0	+	96547687	96547687	8553170	2	231,504,	0,4792,
#Partially deleted in new
chr14	96547895	96565407	chr14:96547895-96565407	0	+	96547895	96564990	789624	5	23,143,101,239,453,	0,4584,7951,8279,17059,
#Partially deleted in new
chr14	96560437	96565059	chr14:96560437-96565059	0	+	96560437	96560437	8553170	3	274,75,105,	0,2381,4517,
#Deleted in new
chr14	96562457	96565106	chr14:96562457-96565106	0	+	96562457	96562457	8553170	2	436,152,	0,2497,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	96592732	96595762	chr14:96592732-96595762	0	+	96592732	96592732	8553170	1	3030,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	96592732	96595763	chr14:96592732-96595763	3	+	96592732	96592732	8553170	5	83,129,210,286,679,	0,388,757,1931,2352,
#Partially deleted in new
chr14	96592767	96594760	chr14:96592767-96594760	1	+	96592767	96592767	8553170	3	482,210,97,	0,722,1896,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	96638186	96638514	chr14:96638186-96638514	3	-	96638186	96638186	8553170	1	328,	0,
#Partially deleted in new
chr14	96797303	96881613	chr14:96797303-96881613	3	+	96833471	96881208	0	13	144,165,56,70,88,109,93,133,121,59,179,91,437,	0,36163,40458,48791,49953,55527,55770,57920,58826,59224,63253,78726,83873,
#Partially deleted in new
chr14	96797384	96853055	chr14:96797384-96853055	0	+	96797384	96797384	8553170	6	63,165,56,70,88,225,	0,36082,40377,48710,49872,55446,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	96852887	96931722	chr14:96852887-96931722	0	+	96852887	96931390	789624	7	52,93,133,121,59,179,392,	0,186,2336,3242,3640,7669,78443,
#Partially deleted in new
chr14	96855303	96860922	chr14:96855303-96860922	0	+	96855303	96860852	789624	4	53,121,59,366,	0,826,1224,5253,
#Partially deleted in new
chr14	96858908	96881391	chr14:96858908-96881391	0	+	96858908	96858908	8553170	4	119,179,91,215,	0,1648,17121,22268,
#Partially deleted in new
chr14	96876028	96881259	chr14:96876028-96881259	0	+	96876028	96881208	789624	3	92,72,83,	0,1473,5148,
#Partially deleted in new
chr14	96877389	96881407	chr14:96877389-96881407	0	+	96877389	96877389	8553170	2	184,231,	0,3787,
#Partially deleted in new
chr14	96931366	96945394	chr14:96931366-96945394	3	+	96931366	96931366	8553170	3	190,164,346,	0,12150,13682,
#Partially deleted in new
chr14	96943638	96945394	chr14:96943638-96945394	0	+	96943638	96943638	789624	3	42,102,157,	0,1410,1599,
#Duplicated in new
chr14	96992863	96996601	chr14:96992863-96996601	3	+	96992863	96992863	8553170	1	3738,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	97110415	97117886	chr14:97110415-97117886	3	-	97110415	97110415	8553170	4	447,66,92,145,	0,1595,3166,7326,
#Partially deleted in new
chr14	97116354	97121501	chr14:97116354-97121501	3	+	97116354	97116354	8553170	4	237,168,178,257,	0,2019,3260,4890,
#Partially deleted in new
chr14	97154856	97158736	chr14:97154856-97158736	3	+	97154856	97154856	789624	2	313,132,	0,3748,
#Partially deleted in new
chr14	97180524	97217778	chr14:97180524-97217778	3	+	97180524	97180524	8553170	4	294,38,60,928,	0,510,16221,36326,
#Partially deleted in new
chr14	97458815	97581601	chr14:97458815-97581601	3	+	97458815	97458815	789624	5	112,111,41,65,404,	0,51439,77822,98601,122382,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	97458869	97464159	chr14:97458869-97464159	1	+	97458869	97458869	789624	3	58,529,528,	0,2934,4762,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	97749263	97762831	chr14:97749263-97762831	3	-	97749263	97749263	789624	2	2712,334,	0,13234,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	97751563	97763989	chr14:97751563-97763989	0	-	97751563	97751563	8553170	2	412,58,	0,12368,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	97925609	97978124	chr14:97925609-97978124	0	-	97925609	97925609	789624	3	1035,275,148,	0,43663,52367,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	97933061	97978056	chr14:97933061-97978056	3	-	97933061	97933061	789624	3	1820,198,80,	0,36211,44915,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	97957929	97978110	chr14:97957929-97978110	1	-	97957929	97957929	789624	4	1891,155,275,134,	0,2333,11343,20047,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	97958035	97978108	chr14:97958035-97978108	0	-	97958035	97958035	789624	3	1785,275,132,	0,11237,19941,
#Partially deleted in new
chr14	97959910	97978046	chr14:97959910-97978046	0	-	97959910	97959910	8553170	3	507,275,70,	0,9362,18066,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	97968841	97978065	chr14:97968841-97978065	0	-	97968841	97968841	8553170	3	174,275,89,	0,431,9135,
#Partially deleted in new
chr14	98068239	98205143	chr14:98068239-98205143	3	-	98068239	98068239	8553170	3	272,149,121,	0,12137,136783,
#Deleted in new
chr14	98136073	98139242	chr14:98136073-98139242	3	+	98136073	98136073	8553170	2	124,250,	0,2919,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	98351366	98351664	chr14:98351366-98351664	3	-	98351366	98351366	8553170	1	298,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	98497131	98514798	chr14:98497131-98514798	3	+	98497131	98497131	8553170	3	107,80,236,	0,12695,17431,
#Partially deleted in new
chr14	98711612	98717766	chr14:98711612-98717766	3	+	98716191	98717274	789624	4	174,170,274,671,	0,713,4504,5483,
#Partially deleted in new
chr14	98711612	98717761	chr14:98711612-98717761	0	+	98711612	98711612	8553170	4	174,170,274,666,	0,713,4504,5483,
#Partially deleted in new
chr14	98711619	98717121	chr14:98711619-98717121	0	+	98711619	98711619	8553170	3	167,274,26,	0,4497,5476,
#Partially deleted in new
chr14	98711661	98716173	chr14:98711661-98716173	0	+	98711661	98711661	8553170	4	125,170,132,57,	0,664,3339,4455,
#Deleted in new
chr14	98844895	98845597	chr14:98844895-98845597	3	+	98844895	98844895	8553170	3	353,87,39,	0,443,663,
#Deleted in new
chr14	98916901	98917801	chr14:98916901-98917801	3	-	98916901	98916901	8553170	1	900,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	98925136	98927805	chr14:98925136-98927805	3	-	98925136	98925136	8553170	2	1589,262,	0,2407,
#Partially deleted in new
chr14	98972878	98973301	chr14:98972878-98973301	7	-	98972878	98972878	16724991	1	423,	0,
#Partially deleted in new
chr14	98973313	98973471	chr14:98973313-98973471	7	+	98973313	98973313	16724991	1	158,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	99158415	99159669	chr14:99158415-99159669	3	+	99158415	99158415	8553170	2	131,430,	0,824,
#Partially deleted in new
chr14	99169286	99271485	chr14:99169286-99271485	1	-	99174150	99271218	789624	3	6909,369,325,	0,88184,101874,
#Partially deleted in new
chr14	99169286	99271228	chr14:99169286-99271228	3	-	99174150	99271218	789624	4	6909,213,369,68,	0,62058,88184,101874,
#Partially deleted in new
chr14	99173960	99271524	chr14:99173960-99271524	1	-	99174150	99271218	789624	2	2235,364,	0,97200,
#Deleted in new
chr14	99262947	99264735	chr14:99262947-99264735	3	+	99262947	99262947	8553170	3	261,128,175,	0,1190,1613,
#Partially deleted in new
chr14	99324798	99332015	chr14:99324798-99332015	3	-	99324798	99324798	8553170	2	120,88,	0,7129,
#Partially deleted in new
chr14	99397745	99480879	chr14:99397745-99480879	3	-	99398678	99465805	0	13	1380,161,86,167,75,115,59,257,73,149,93,111,152,	0,2353,6479,7459,8770,15205,16130,60533,61367,63446,65740,67957,82982,
#Partially deleted in new
chr14	99398468	99480801	chr14:99398468-99480801	0	-	99459135	99465805	789624	10	657,161,86,167,75,257,73,93,111,74,	0,1630,5756,6736,8047,59810,60644,65017,67234,82259,
#Partially deleted in new
chr14	99398731	99413250	chr14:99398731-99413250	0	-	99398731	99398731	8553170	3	394,161,300,	0,1367,14219,
#Partially deleted in new
chr14	99405314	99480860	chr14:99405314-99480860	0	-	99459135	99465805	789624	9	57,75,115,59,257,73,93,111,133,	0,1201,7636,8561,52964,53798,58171,60388,75413,
#Partially deleted in new
chr14	99409803	99480788	chr14:99409803-99480788	1	-	99410173	99465805	0	9	412,115,59,257,73,149,93,111,61,	0,3147,4072,48475,49309,51388,53682,55899,70924,
#Partially deleted in new
chr14	99409804	99480889	chr14:99409804-99480889	1	-	99459135	99465805	789624	8	411,115,59,257,73,93,111,162,	0,3146,4071,48474,49308,53681,55898,70923,
#Partially deleted in new
chr14	99411278	99480790	chr14:99411278-99480790	1	-	99412920	99465805	789624	8	1787,59,257,73,149,93,111,63,	0,2597,47000,47834,49913,52207,54424,69449,
#Partially deleted in new
chr14	99411577	99480837	chr14:99411577-99480837	0	-	99459135	99465805	789624	7	1488,59,257,73,93,111,110,	0,2298,46701,47535,51908,54125,69150,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	99444305	99444412	chr14:99444305-99444412	3	+	99444305	99444305	8553170	1	107,	0,
#Partially deleted in new
chr14	99458298	99478769	chr14:99458298-99478769	0	-	99458298	99458298	8553170	5	237,73,93,111,31,	0,814,5187,7404,20440,
#Partially deleted in new
chr14	99481168	99502376	chr14:99481168-99502376	0	+	99481168	99481168	8553170	7	74,142,249,82,132,106,170,	0,169,11457,12345,14329,19597,21038,
#Partially deleted in new
chr14	99481408	99512440	chr14:99481408-99512440	3	+	99492677	99510782	0	11	71,249,82,132,106,58,170,266,34,72,2284,	0,11217,12105,14089,19357,19947,20798,21310,22202,25667,28748,
#Partially deleted in new
chr14	99481411	99493103	chr14:99481411-99493103	0	+	99481411	99481411	8553170	2	68,478,	0,11214,
#Partially deleted in new
chr14	99481411	99502312	chr14:99481411-99502312	0	+	99492677	99502312	789624	7	203,249,82,132,106,58,106,	0,11214,12102,14086,19354,19944,20795,
#Partially deleted in new
chr14	99481423	99535044	chr14:99481423-99535044	1	+	99492677	99534683	789624	11	56,249,82,132,106,58,170,266,34,72,381,	0,11202,12090,14074,19342,19932,20783,21295,22187,25652,53240,
#Partially deleted in new
chr14	99481424	99495547	chr14:99481424-99495547	0	+	99492677	99495547	789624	5	55,375,249,82,50,	0,10521,11201,12089,14073,
#Partially deleted in new
chr14	99481449	99501019	chr14:99481449-99501019	0	+	99481449	99481449	8553170	5	30,249,82,132,254,	0,11176,12064,14048,19316,
#Partially deleted in new
chr14	99493513	99495628	chr14:99493513-99495628	0	+	99493513	99493513	8553170	2	82,124,	0,1991,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	99493969	99511514	chr14:99493969-99511514	0	+	99493969	99493969	8553170	5	1660,1611,926,72,1358,	0,6796,8749,13106,16187,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	99500179	99604026	chr14:99500179-99604026	3	-	99515245	99603959	789624	6	15156,99,96,108,74,860,	0,16008,16908,21953,35835,102987,
#Partially deleted in new
chr14	99512031	99522563	chr14:99512031-99522563	1	-	99515245	99517093	789624	5	3304,99,96,108,186,	0,4156,5056,10101,10346,
#Deleted in new
chr14	99512500	99513576	chr14:99512500-99513576	3	+	99512500	99512500	8553170	2	647,242,	0,834,
#Partially deleted in new
chr14	99514960	99536088	chr14:99514960-99536088	0	-	99515245	99536088	789624	4	375,99,108,74,	0,1227,7172,21054,
#Partially deleted in new
chr14	99515086	99522945	chr14:99515086-99522945	1	-	99515245	99517093	789624	5	249,99,96,108,378,	0,1101,2001,7046,7481,
#Partially deleted in new
chr14	99515199	99580126	chr14:99515199-99580126	0	-	99515245	99580126	789624	6	136,99,96,108,74,106,	0,988,1888,6933,20815,64821,
#Partially deleted in new
chr14	99515299	99576592	chr14:99515299-99576592	0	-	99515299	99517093	789624	6	36,99,96,108,74,130,	0,888,1788,6833,20715,61163,
#Partially deleted in new
chr14	99516264	99572975	chr14:99516264-99572975	0	-	99516264	99572768	789624	5	22,96,108,74,256,	0,823,5868,19750,56455,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	99583016	99583118	chr14:99583016-99583118	3	+	99583016	99583016	8553170	1	102,	0,
#Partially deleted in new
chr14	99604555	99625740	chr14:99604555-99625740	3	+	99604555	99604555	8553170	2	60,979,	0,20206,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	99645109	99680569	chr14:99645109-99680569	3	+	99645207	99675626	789624	9	353,647,144,329,127,146,82,83,5479,	0,7114,11890,14318,15170,17766,23112,27207,29981,
#Partially deleted in new
chr14	99645142	99669277	chr14:99645142-99669277	1	+	99645207	99668928	789624	8	320,647,144,329,127,146,82,446,	0,7081,11857,14285,15137,17733,23079,23689,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	99684303	99713437	chr14:99684303-99713437	0	+	99684417	99695440	789624	8	233,81,82,43,74,87,139,5870,	0,6777,7476,11128,15162,15711,22343,23264,
#Partially deleted in new
chr14	99684313	99727301	chr14:99684313-99727301	3	+	99684417	99726727	0	15	223,81,82,74,87,139,111,151,63,73,85,111,89,67,745,	0,6767,7466,15152,15701,22333,23254,31496,31823,33740,36925,37642,41077,41876,42243,
#Partially deleted in new
chr14	99684703	99726862	chr14:99684703-99726862	1	+	99699474	99726727	0	15	78,81,82,74,87,139,111,151,63,73,85,111,89,67,306,	0,6377,7076,14762,15311,21943,22864,31106,31433,33350,36535,37252,40687,41486,41853,
#Partially deleted in new
chr14	99691444	99693648	chr14:99691444-99693648	3	-	99691444	99691444	8553170	3	403,60,30,	0,1712,2174,
#Partially deleted in new
chr14	99705996	99727300	chr14:99705996-99727300	0	+	99705996	99705996	8553170	10	789,111,151,63,73,85,81,89,67,744,	0,1571,9813,10140,12057,15242,15959,19394,20193,20560,
#Partially deleted in new
chr14	99715809	99726269	chr14:99715809-99726269	0	+	99715809	99716140	789624	7	151,63,73,85,81,89,80,	0,327,2244,5429,6146,9581,10380,
#Partially deleted in new
chr14	99715857	99723132	chr14:99715857-99723132	0	+	99715857	99722945	789624	6	103,63,73,85,111,247,	0,279,2196,5381,6098,7028,
#Partially deleted in new
chr14	99717682	99722007	chr14:99717682-99722007	0	+	99717682	99717682	8553170	3	444,85,52,	0,3556,4273,
#Partially deleted in new
chr14	99737692	99909416	chr14:99737692-99909416	0	+	99737832	99909416	789624	11	168,183,133,135,29,130,150,70,111,96,72,	0,113160,127821,140792,153506,156936,159452,160540,163236,169945,171652,
#Partially deleted in new
chr14	99737748	99878552	chr14:99737748-99878552	0	+	99737832	99878552	789624	5	112,183,133,57,68,	0,113104,127765,137182,140736,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr14	99772948	99940324	chr14:99772948-99940324	1	+	99850878	99940112	789624	23	1065,183,133,57,135,29,130,150,70,111,96,135,100,155,126,132,68,89,98,88,96,131,338,	0,77904,92565,101982,105536,118250,121680,124196,125284,127980,134689,136396,137293,138473,141230,141617,144833,147840,163080,163298,164868,166248,167038,
#Partially deleted in new
chr14	99773703	99865611	chr14:99773703-99865611	0	+	99850878	99865611	789624	3	310,176,98,	0,77156,91810,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr14	99792647	99942014	chr14:99792647-99942014	1	+	99850247	99940112	8553170	24	255,209,183,133,57,135,29,130,150,70,111,96,135,100,155,126,132,68,89,98,88,96,131,2028,	0,57476,58205,72866,82283,85837,98551,101981,104497,105585,108281,114990,116697,117594,118774,121531,121918,125134,128141,143381,143599,145169,146549,147339,
#Partially deleted in new
chr14	99792683	99878517	chr14:99792683-99878517	0	+	99850878	99878517	789624	4	219,183,133,33,	0,58169,72830,85801,
#Partially deleted in new
chr14	99793337	99942060	chr14:99793337-99942060	1	+	99793476	99940112	0	22	206,183,133,135,29,130,150,70,111,96,135,100,155,126,132,68,89,98,88,96,131,2074,	0,57515,72176,85147,97861,101291,103807,104895,107591,114300,116007,116904,118084,120841,121228,124444,127451,142691,142909,144479,145859,146649,
#Partially deleted in new
chr14	99793342	99941537	chr14:99793342-99941537	3	+	99793476	99940112	0	23	201,183,133,57,135,29,130,150,70,111,96,135,100,155,126,132,68,89,98,88,96,131,1551,	0,57510,72171,81588,85142,97856,101286,103802,104890,107586,114295,116002,116899,118079,120836,121223,124439,127446,142686,142904,144474,145854,146644,
#Partially deleted in new
chr14	99793412	99878521	chr14:99793412-99878521	0	+	99793476	99865525	789624	4	131,183,129,37,	0,57440,72105,85072,
#Partially deleted in new
chr14	99793434	99900979	chr14:99793434-99900979	0	+	99850878	99900979	789624	9	83,183,133,135,29,130,150,70,51,	0,57418,72079,85050,97764,101194,103710,104798,107494,
#Partially deleted in new
chr14	99809450	99865597	chr14:99809450-99865597	0	+	99809674	99865597	789624	3	234,183,84,	0,41402,56063,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	99839041	99865630	chr14:99839041-99865630	0	+	99850247	99865630	789624	4	30,209,183,117,	0,11082,11811,26472,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	99850849	99883546	chr14:99850849-99883546	0	+	99850849	99850849	8553170	4	186,133,135,306,	0,14664,27635,32391,
#Partially deleted in new
chr14	99865608	99886105	chr14:99865608-99886105	0	+	99865608	99885900	789624	3	38,135,233,	0,12876,20264,
#Partially deleted in new
chr14	99894452	99900982	chr14:99894452-99900982	0	+	99894452	99894452	8553170	4	306,150,70,54,	0,2692,3780,6476,
#Partially deleted in new
chr14	99897241	99910322	chr14:99897241-99910322	0	+	99897241	99909344	789624	6	53,70,111,96,171,81,	0,991,3687,10396,12067,13000,
#Partially deleted in new
chr14	99898232	99911551	chr14:99898232-99911551	0	+	99898232	99911551	789624	5	70,111,135,100,130,	0,2696,11112,12009,13189,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	99906871	99915412	chr14:99906871-99915412	0	+	99906871	99906871	8553170	6	862,135,100,155,126,847,	0,2473,3370,4550,7307,7694,
#Partially deleted in new
chr14	99914575	99939231	chr14:99914575-99939231	0	+	99914575	99920862	789624	7	122,34,89,98,88,96,35,	0,3240,6213,21453,21671,23241,24621,
#Deleted in new
chr14	99936166	99940174	chr14:99936166-99940174	0	+	99936166	99936166	8553170	4	168,96,131,188,	0,1650,3030,3820,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	99945314	99945477	chr14:99945314-99945477	3	+	99945314	99945314	8553170	1	163,	0,
#Deleted in new
chr14	99964528	99965378	chr14:99964528-99965378	7	+	99964528	99964528	16724991	1	850,	0,
#Partially deleted in new
chr14	99971448	100144236	chr14:99971448-100144236	1	+	99972052	100143738	789624	14	609,169,178,64,65,230,122,61,64,67,63,67,58,536,	0,113238,126032,152090,155258,157070,158114,161270,164456,166129,166291,169731,170287,172252,
#Deleted in new
chr14	99974335	99975149	chr14:99974335-99975149	7	-	99974335	99974335	16724991	1	814,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	100019381	100140117	chr14:100019381-100140117	1	+	100019664	100137869	789624	11	306,169,178,64,65,230,122,61,64,67,2378,	0,65305,78099,104157,107325,109137,110181,113337,116523,118196,118358,
#Partially deleted in new
chr14	100019575	100102347	chr14:100019575-100102347	0	+	100019575	100019575	8553170	5	112,113,169,178,44,	0,54927,65111,77905,82728,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	100052802	100074878	chr14:100052802-100074878	3	-	100052802	100052802	8553170	2	186,362,	0,21714,
#Partially deleted in new
chr14	100065277	100144236	chr14:100065277-100144236	3	+	100065500	100143738	789624	14	234,169,178,64,65,230,122,61,64,67,63,67,58,536,	0,19409,32203,58261,61429,63241,64285,67441,70627,72300,72462,75902,76458,78423,
#Partially deleted in new
chr14	100065416	100085098	chr14:100065416-100085098	0	+	100065416	100065416	8553170	2	95,412,	0,19270,
#Partially deleted in new
chr14	100065420	100102425	chr14:100065420-100102425	0	+	100065420	100065420	8553170	4	91,169,178,122,	0,19266,32060,36883,
#Partially deleted in new
chr14	100065420	100123570	chr14:100065420-100123570	0	+	100084720	100123570	789624	5	91,113,169,178,32,	0,9082,19266,32060,58118,
#Partially deleted in new
chr14	100065424	100108106	chr14:100065424-100108106	1	+	100065500	100107319	789624	4	87,169,178,1281,	0,19262,32056,41401,
#Partially deleted in new
chr14	100065429	100128721	chr14:100065429-100128721	0	+	100065500	100102320	789624	7	82,169,178,76,64,65,203,	0,19257,32051,36874,58109,61277,63089,
#Partially deleted in new
chr14	100065431	100144230	chr14:100065431-100144230	0	+	100065500	100126714	789624	13	80,169,178,65,230,122,61,64,67,63,67,58,530,	0,19255,32049,61275,63087,64131,67287,70473,72146,72308,75748,76304,78269,
#Partially deleted in new
chr14	100065444	100097745	chr14:100065444-100097745	0	+	100065444	100065444	8553170	3	67,169,265,	0,19242,32036,
#Partially deleted in new
chr14	100066436	100128581	chr14:100066436-100128581	0	+	100084720	100128581	789624	6	51,169,178,64,65,63,	0,18250,31044,57102,60270,62082,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	100084830	100106713	chr14:100084830-100106713	0	+	100084830	100084830	8553170	3	25,178,690,	0,12650,21193,
#Partially deleted in new
chr14	100096946	100135968	chr14:100096946-100135968	0	+	100097618	100135968	789624	8	99,178,64,65,230,122,61,64,	0,534,26592,29760,31572,32616,35772,38958,
#Deleted in new
chr14	100109418	100109514	chr14:100109418-100109514	3	-	100109418	100109418	5263520	1	96,	0,
#Deleted in new
chr14	100109654	100109753	chr14:100109654-100109753	3	+	100109654	100109654	5263520	1	99,	0,
#Partially deleted in new
chr14	100114529	100128593	chr14:100114529-100128593	0	+	100114529	100114529	8553170	4	62,64,65,75,	0,9009,12177,13989,
#Partially deleted in new
chr14	100128586	100144218	chr14:100128586-100144218	0	+	100128586	100143738	789624	8	162,122,61,64,67,67,58,518,	0,976,4132,7318,8991,12593,13149,15114,
#Partially deleted in new
chr14	100128620	100141767	chr14:100128620-100141767	0	+	100128620	100134655	789624	9	128,122,61,215,64,67,63,67,32,	0,942,4098,6032,7284,8957,9119,12559,13115,
#Deleted in new
chr14	100135007	100137606	chr14:100135007-100137606	0	+	100135007	100135007	8553170	3	515,64,29,	0,897,2570,
#Deleted in new
chr14	100135770	100137999	chr14:100135770-100137999	0	+	100135770	100135770	8553170	3	198,67,260,	0,1807,1969,
#Partially deleted in new
chr14	100137105	100143863	chr14:100137105-100143863	0	+	100137105	100137105	8553170	5	539,63,67,58,163,	0,634,4074,4630,6595,
#Partially deleted in new
chr14	100138567	100141229	chr14:100138567-100141229	0	+	100138567	100138567	8553170	2	330,50,	0,2612,
#Partially deleted in new
chr14	100138811	100144232	chr14:100138811-100144232	0	+	100138811	100138811	8553170	6	86,36,67,58,190,219,	0,522,2368,2924,4889,5202,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	100140292	100144235	chr14:100140292-100144235	0	+	100140292	100140292	8553170	3	954,58,535,	0,1443,3408,
#Deleted in new
chr14	100141179	100142235	chr14:100141179-100142235	0	+	100141179	100141179	8553170	2	67,500,	0,556,
#Partially deleted in new
chr14	100143956	100160163	chr14:100143956-100160163	3	-	100146760	100159587	789624	3	2951,743,658,	0,5011,15549,
#Partially deleted in new
chr14	100146576	100159595	chr14:100146576-100159595	1	-	100146824	100159587	789624	2	331,90,	0,12929,
#Partially deleted in new
chr14	100148984	100155717	chr14:100148984-100155717	0	-	100148984	100148984	8553170	2	726,114,	0,6619,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	100207406	100238555	chr14:100207406-100238555	3	-	100207406	100207406	8553170	2	246,85,	0,31064,
#Deleted in new
chr14	100238297	100239346	chr14:100238297-100239346	0	+	100239244	100239346	789624	2	493,143,	0,906,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	100238984	100282792	chr14:100238984-100282792	3	+	100239244	100277600	0	5	939,163,61,159,5375,	0,23319,35713,37505,38433,
#Partially deleted in new
chr14	100239753	100276578	chr14:100239753-100276578	0	+	100239753	100276526	789624	3	170,163,89,	0,22550,36736,
#Partially deleted in new
chr14	100239758	100278142	chr14:100239758-100278142	0	+	100239758	100277600	789624	4	165,163,61,725,	0,22545,34939,37659,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	100263780	100265405	chr14:100263780-100265405	3	+	100263780	100263780	8553170	2	441,92,	0,1533,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	100275728	100278470	chr14:100275728-100278470	0	+	100275728	100275728	8553170	1	2742,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	100276198	100277793	chr14:100276198-100277793	0	+	100276198	100276198	8553170	2	450,376,	0,1219,
#Deleted in new
chr14	100277356	100277417	chr14:100277356-100277417	3	+	100277356	100277356	5263520	1	61,	0,
#Partially deleted in new
chr14	100279958	100291456	chr14:100279958-100291456	3	-	100279958	100279958	8553170	2	107,99,	0,11399,
#Partially deleted in new
chr14	100291110	100306533	chr14:100291110-100306533	3	-	100292282	100306232	789624	4	1922,84,44,335,	0,2183,7731,15088,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	100291115	100296545	chr14:100291115-100296545	1	-	100292282	100292996	789624	2	1917,3252,	0,2178,
#Deleted in new
chr14	100291116	100291950	chr14:100291116-100291950	1	+	100291116	100291116	8553170	2	404,25,	0,809,
#Partially deleted in new
chr14	100291117	100306441	chr14:100291117-100306441	1	-	100292712	100306232	789624	3	1915,84,243,	0,2176,15081,
#Partially deleted in new
chr14	100291117	100294656	chr14:100291117-100294656	3	+	100291117	100291117	8553170	2	214,264,	0,3275,
#Partially deleted in new
chr14	100291685	100295734	chr14:100291685-100295734	1	-	100292282	100292996	789624	3	1347,84,109,	0,1608,3940,
#Partially deleted in new
chr14	100292229	100295861	chr14:100292229-100295861	1	-	100292282	100292996	789624	4	803,84,31,42,	0,1064,3396,3590,
#Partially deleted in new
chr14	100292457	100306547	chr14:100292457-100306547	0	-	100295667	100306232	789624	5	575,84,72,44,349,	0,836,3168,6384,13741,
#Partially deleted in new
chr14	100292524	100306515	chr14:100292524-100306515	0	-	100295667	100306232	789624	5	508,84,72,44,317,	0,769,3101,6317,13674,
#Partially deleted in new
chr14	100292607	100294199	chr14:100292607-100294199	0	-	100292607	100292996	789624	3	425,84,60,	0,686,1532,
#Partially deleted in new
chr14	100292734	100306490	chr14:100292734-100306490	0	-	100292734	100306232	789624	3	298,84,292,	0,559,13464,
#Partially deleted in new
chr14	100292780	100306517	chr14:100292780-100306517	0	-	100295702	100306232	789624	5	252,84,368,44,319,	0,513,2845,6061,13418,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	100293586	100294388	chr14:100293586-100294388	0	-	100293586	100293586	8553170	2	273,402,	0,400,
#Partially deleted in new
chr14	100295692	100306533	chr14:100295692-100306533	0	-	100295692	100295692	8553170	4	301,44,117,335,	0,3149,9967,10506,
#Partially deleted in new
chr14	100295694	100299076	chr14:100295694-100299076	0	-	100295694	100295694	8553170	4	299,164,44,62,	0,2332,3147,3320,
#Partially deleted in new
chr14	100295892	100298248	chr14:100295892-100298248	0	-	100295892	100295892	8553170	2	101,222,	0,2134,
#Partially deleted in new
chr14	100295896	100299244	chr14:100295896-100299244	0	-	100295896	100295896	8553170	3	97,44,230,	0,2945,3118,
#Partially deleted in new
chr14	100298018	100306532	chr14:100298018-100306532	0	-	100298018	100298018	8553170	3	172,44,334,	0,823,8180,
#Partially deleted in new
chr14	100298597	100306444	chr14:100298597-100306444	0	-	100298597	100298597	8553170	2	288,246,	0,7601,
#Deleted in new
chr14	100298644	100299529	chr14:100298644-100299529	0	-	100298644	100298644	8553170	2	241,515,	0,370,
#Deleted in new
chr14	100304914	100305809	chr14:100304914-100305809	0	-	100304914	100304914	8553170	2	413,150,	0,745,
#Deleted in new
chr14	100304952	100306424	chr14:100304952-100306424	0	-	100304952	100304952	8553170	2	824,226,	0,1246,
#Deleted in new
chr14	100307858	100307956	chr14:100307858-100307956	3	+	100307858	100307858	5263520	1	98,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	100319072	100319370	chr14:100319072-100319370	3	-	100319072	100319072	8553170	1	298,	0,
#Partially deleted in new
chr14	100323336	100330378	chr14:100323336-100330378	3	+	100323414	100329645	789624	6	106,44,72,183,319,1014,	0,2451,2820,3851,5389,6028,
#Partially deleted in new
chr14	100323341	100330136	chr14:100323341-100330136	1	+	100328836	100329645	789624	6	101,44,133,183,319,772,	0,2446,2754,3846,5384,6023,
#Partially deleted in new
chr14	100333787	100375644	chr14:100333787-100375644	1	-	100334874	100369185	0	11	1249,141,174,113,101,183,120,109,214,172,362,	0,3274,8610,9487,12958,19899,20659,26766,27920,35299,41495,
#Partially deleted in new
chr14	100333789	100354061	chr14:100333789-100354061	3	+	100333789	100333789	8553170	2	114,271,	0,20001,
#Partially deleted in new
chr14	100333801	100376335	chr14:100333801-100376335	1	-	100334874	100361897	0	10	1235,141,174,113,101,183,120,109,214,76,	0,3260,8596,9473,12944,19885,20645,26752,27906,42458,
#Partially deleted in new
chr14	100333817	100376805	chr14:100333817-100376805	3	-	100334874	100369185	0	11	1219,141,174,113,101,183,120,109,214,172,546,	0,3244,8580,9457,12928,19869,20629,26736,27890,35269,42442,
#Partially deleted in new
chr14	100333827	100375608	chr14:100333827-100375608	1	-	100334874	100361897	0	10	1209,141,174,113,101,183,120,109,214,326,	0,3234,8570,9447,12918,19859,20619,26726,27880,41455,
#Partially deleted in new
chr14	100334478	100375347	chr14:100334478-100375347	1	-	100334874	100369185	0	12	558,141,174,113,101,183,120,109,214,172,130,65,	0,2583,7919,8796,12267,19208,19968,26075,27229,34608,39657,40804,
#Partially deleted in new
chr14	100334492	100376251	chr14:100334492-100376251	1	-	100334874	100361897	0	11	544,141,174,113,101,183,120,109,214,68,741,	0,2569,7905,8782,12253,19194,19954,26061,27215,40790,41018,
#Partially deleted in new
chr14	100334926	100354423	chr14:100334926-100354423	0	-	100334926	100334926	8553170	6	110,141,174,113,101,737,	0,2135,7471,8348,11819,18760,
#Partially deleted in new
chr14	100336840	100342534	chr14:100336840-100342534	0	-	100336840	100336840	8553170	2	362,137,	0,5557,
#Deleted in new
chr14	100339831	100340554	chr14:100339831-100340554	3	+	100339831	100339831	8553170	2	249,303,	0,420,
#Partially deleted in new
chr14	100342049	100346829	chr14:100342049-100346829	0	-	100342211	100346829	789624	3	522,113,84,	0,1225,4696,
#Partially deleted in new
chr14	100346768	100375607	chr14:100346768-100375607	0	-	100346768	100361897	789624	6	78,183,120,109,214,97,	0,6918,7678,13785,14939,28742,
#Partially deleted in new
chr14	100346777	100376287	chr14:100346777-100376287	0	-	100346777	100361897	789624	7	69,183,120,109,214,124,28,	0,6909,7669,13776,14930,28505,29482,
#Partially deleted in new
chr14	100352882	100361923	chr14:100352882-100361923	0	-	100352882	100352882	8553170	5	238,183,120,109,216,	0,804,1564,7671,8825,
#Partially deleted in new
chr14	100353773	100376311	chr14:100353773-100376311	0	-	100353773	100369185	789624	7	96,120,109,214,172,85,52,	0,673,6780,7934,15313,20206,22486,
#Partially deleted in new
chr14	100353825	100375333	chr14:100353825-100375333	0	-	100353825	100361897	789624	7	44,120,109,195,172,130,51,	0,621,6728,7882,15261,20310,21457,
#Partially deleted in new
chr14	100353827	100376302	chr14:100353827-100376302	0	-	100353827	100361897	789624	5	42,120,109,214,43,	0,619,6726,7880,22432,
#Partially deleted in new
chr14	100354192	100375473	chr14:100354192-100375473	0	-	100354192	100354192	8553170	5	374,109,214,172,191,	0,6361,7515,14894,21090,
#Partially deleted in new
chr14	100354301	100376330	chr14:100354301-100376330	0	-	100354301	100354301	8553170	5	265,109,214,172,71,	0,6252,7406,14785,21958,
#Partially deleted in new
chr14	100354400	100376343	chr14:100354400-100376343	0	-	100354400	100354400	8553170	4	166,109,214,84,	0,6153,7307,21859,
#Partially deleted in new
chr14	100354444	100375612	chr14:100354444-100375612	0	-	100354444	100361897	789624	4	122,109,214,102,	0,6109,7263,21066,
#Partially deleted in new
chr14	100354530	100375347	chr14:100354530-100375347	0	-	100354530	100369185	789624	6	36,109,214,172,44,65,	0,6023,7177,14556,19605,20752,
#Partially deleted in new
chr14	100354530	100376308	chr14:100354530-100376308	0	-	100354530	100354530	8553170	4	36,214,172,49,	0,7177,14556,21729,
#Partially deleted in new
chr14	100354538	100376334	chr14:100354538-100376334	0	-	100354538	100369185	789624	6	28,109,214,172,109,75,	0,6015,7169,14548,19597,21721,
#Partially deleted in new
chr14	100360523	100376299	chr14:100360523-100376299	0	-	100360523	100360523	8553170	4	139,214,172,40,	0,1184,8563,15736,
#Partially deleted in new
chr14	100360602	100376307	chr14:100360602-100376307	0	-	100360602	100369185	789624	5	60,214,172,68,48,	0,1105,8484,14680,15657,
#Partially deleted in new
chr14	100360631	100374942	chr14:100360631-100374942	0	-	100360631	100369185	789624	4	31,214,172,167,	0,1076,8455,14144,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	100360641	100376305	chr14:100360641-100376305	0	-	100366055	100369185	789624	5	21,214,114,172,46,	0,1066,5312,8445,15618,
#Partially deleted in new
chr14	100360653	100376311	chr14:100360653-100376311	0	-	100360653	100369185	789624	5	9,214,172,121,52,	0,1054,8433,14629,15606,
#Partially deleted in new
chr14	100361702	100375473	chr14:100361702-100375473	0	-	100361702	100361702	8553170	3	219,172,191,	0,7384,13580,
#Partially deleted in new
chr14	100361707	100376309	chr14:100361707-100376309	0	-	100361707	100369185	789624	4	214,172,124,50,	0,7379,13575,14552,
#Partially deleted in new
chr14	100361729	100375607	chr14:100361729-100375607	0	-	100361729	100369185	789624	4	192,172,130,97,	0,7357,12406,13781,
#Partially deleted in new
chr14	100361762	100375475	chr14:100361762-100375475	0	-	100361762	100369185	789624	4	159,172,14,193,	0,7324,12373,13520,
#Partially deleted in new
chr14	100361801	100375475	chr14:100361801-100375475	0	-	100368441	100369185	789624	4	120,92,172,193,	0,6572,7285,13481,
#Partially deleted in new
chr14	100361809	100376285	chr14:100361809-100376285	0	-	100361809	100369185	789624	5	112,172,130,124,26,	0,7277,12326,13473,14450,
#Partially deleted in new
chr14	100361816	100376309	chr14:100361816-100376309	0	-	100361816	100369185	789624	5	105,172,109,124,50,	0,7270,12319,13466,14443,
#Partially deleted in new
chr14	100361830	100375344	chr14:100361830-100375344	0	-	100361830	100369185	789624	4	91,172,85,62,	0,7256,12305,13452,
#Partially deleted in new
chr14	100361844	100374949	chr14:100361844-100374949	0	-	100361844	100369185	789624	4	77,172,130,174,	0,7242,12291,12931,
#Partially deleted in new
chr14	100361846	100375467	chr14:100361846-100375467	0	-	100361846	100369185	789624	4	75,172,85,185,	0,7240,12133,13436,
#Partially deleted in new
chr14	100361855	100375593	chr14:100361855-100375593	0	-	100361855	100369185	789624	4	66,172,109,311,	0,7231,12280,13427,
#Partially deleted in new
chr14	100366627	100366920	chr14:100366627-100366920	7	+	100366627	100366627	16724991	1	293,	0,
#Partially deleted in new
chr14	100368441	100369185	chr14:100368441-100369185	1	-	100368441	100369185	789624	2	24,99,	0,645,
#Partially deleted in new
chr14	100369086	100375744	chr14:100369086-100375744	0	-	100369086	100369185	789624	3	172,124,234,	0,6196,6424,
#Partially deleted in new
chr14	100369108	100376308	chr14:100369108-100376308	0	-	100369108	100369185	789624	4	150,109,264,49,	0,5027,6174,7151,
#Partially deleted in new
chr14	100370378	100375547	chr14:100370378-100375547	0	-	100370378	100370378	8553170	3	149,130,265,	0,3757,4904,
#Partially deleted in new
chr14	100376417	100529855	chr14:100376417-100529855	0	+	100376417	100376417	8553170	6	78,148,131,171,141,36,	0,91603,107576,149452,152650,153402,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	100376432	100530271	chr14:100376432-100530271	1	+	100380924	100530041	789624	7	72,837,148,131,171,141,452,	0,4477,91588,107561,149437,152635,153387,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	100376438	100530303	chr14:100376438-100530303	3	+	100380924	100530041	789624	7	57,837,148,131,171,141,484,	0,4471,91582,107555,149431,152629,153381,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	100376493	100530303	chr14:100376493-100530303	1	+	100380924	100530041	789624	7	211,837,148,131,171,141,484,	0,4416,91527,107500,149376,152574,153326,
#Partially deleted in new
chr14	100376499	100525895	chr14:100376499-100525895	0	+	100376499	100376499	8553170	4	205,148,131,26,	0,91521,107494,149370,
#Partially deleted in new
chr14	100376540	100455512	chr14:100376540-100455512	1	+	100380924	100454461	789624	3	164,837,1054,	0,4369,77918,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	100380909	100530290	chr14:100380909-100530290	0	+	100380924	100484041	789624	5	837,131,171,141,471,	0,103084,144960,148158,148910,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	100381999	100530290	chr14:100381999-100530290	1	+	100382100	100530041	789624	6	152,148,131,171,141,471,	0,86021,101994,143870,147068,147820,
#Deleted in new
chr14	100406598	100407029	chr14:100406598-100407029	1	+	100406598	100406598	8553170	2	165,70,	0,361,
#Deleted in new
chr14	100406904	100407613	chr14:100406904-100407613	3	+	100406904	100406904	8553170	3	267,78,96,	0,415,613,
#Partially deleted in new
chr14	100476473	100530007	chr14:100476473-100530007	0	+	100476473	100476473	8553170	5	108,131,171,141,188,	0,7520,49396,52594,53346,
#Partially deleted in new
chr14	100480951	100481274	chr14:100480951-100481274	7	+	100480951	100480951	16724991	1	323,	0,
#Deleted in new
chr14	100487543	100487787	chr14:100487543-100487787	3	+	100487543	100487543	8553170	1	244,	0,
#Partially deleted in new
chr14	100503699	100530021	chr14:100503699-100530021	0	+	100503699	100503699	8553170	5	88,201,171,141,202,	0,797,22170,25368,26120,
#Partially deleted in new
chr14	100525945	100529624	chr14:100525945-100529624	0	+	100525945	100529337	789624	2	95,557,	0,3122,
#Partially deleted in new
chr14	100537146	100568141	chr14:100537146-100568141	1	-	100537968	100567924	789624	7	2169,84,108,67,162,90,231,	0,3349,6711,7853,9354,13273,30764,
#Partially deleted in new
chr14	100537148	100569794	chr14:100537148-100569794	3	-	100537968	100567924	789624	7	2167,84,108,67,162,29,57,	0,3347,6709,7851,9352,30762,32589,
#Partially deleted in new
chr14	100537148	100577952	chr14:100537148-100577952	1	-	100537968	100577952	789624	7	2167,84,108,67,162,29,642,	0,3347,6709,7851,9352,30762,40162,
#Partially deleted in new
chr14	100537152	100568070	chr14:100537152-100568070	1	-	100537968	100567924	789624	6	2163,84,108,67,162,160,	0,3343,6705,7847,9348,30758,
#Deleted in new
chr14	100537152	100549889	chr14:100537152-100549889	0	-	100537152	100537152	8553170	5	2163,84,108,67,3389,	0,3343,6705,7847,9348,
#Partially deleted in new
chr14	100538887	100568491	chr14:100538887-100568491	0	-	100538887	100568465	789624	7	428,84,108,67,162,29,47,	0,1608,4970,6112,7613,29023,29557,
#Partially deleted in new
chr14	100538887	100569558	chr14:100538887-100569558	0	-	100538887	100567924	789624	7	428,84,108,67,162,29,132,	0,1608,4970,6112,7613,29023,30539,
#Deleted in new
chr14	100538938	100540409	chr14:100538938-100540409	3	+	100538938	100538938	8553170	2	273,280,	0,1191,
#Deleted in new
chr14	100539034	100548098	chr14:100539034-100548098	0	-	100539034	100545050	789624	6	281,84,108,67,162,45,	0,1461,4823,5965,7466,9019,
#Partially deleted in new
chr14	100539247	100568070	chr14:100539247-100568070	0	-	100539247	100567924	789624	6	68,84,108,67,162,160,	0,1248,4610,5752,7253,28663,
#Partially deleted in new
chr14	100539298	100587413	chr14:100539298-100587413	0	-	100539298	100587290	789624	7	17,84,108,67,162,29,165,	0,1197,4559,5701,7202,28612,47950,
#Deleted in new
chr14	100543941	100545329	chr14:100543941-100545329	0	-	100543941	100543941	8553170	2	24,330,	0,1058,
#Partially deleted in new
chr14	100546021	100569086	chr14:100546021-100569086	0	-	100546021	100546021	8553170	4	246,162,29,188,	0,479,21889,22877,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	100587774	100589326	chr14:100587774-100589326	3	-	100587774	100587774	8553170	2	394,72,	0,1480,
#Partially deleted in new
chr14	100657249	100672775	chr14:100657249-100672775	3	+	100657249	100657249	8553170	2	856,1215,	0,14311,
#Partially deleted in new
chr14	100657267	100672744	chr14:100657267-100672744	0	+	100657267	100657267	5263520	2	443,1184,	0,14293,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	100657357	100667545	chr14:100657357-100667545	0	+	100657357	100657357	8553170	2	353,315,	0,9873,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	100663085	100667772	chr14:100663085-100667772	0	+	100663085	100663085	8553170	3	193,154,542,	0,283,4145,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	100663085	100676069	chr14:100663085-100676069	1	+	100663085	100663085	8553170	4	193,154,126,101,	0,283,6235,12883,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	100663120	100663646	chr14:100663120-100663646	0	+	100663120	100663120	8553170	2	158,278,	0,248,
#Partially deleted in new
chr14	100675929	100679884	chr14:100675929-100679884	3	-	100675929	100675929	8553170	2	619,103,	0,3852,
#Deleted in new
chr14	100725704	100732070	chr14:100725704-100732070	0	+	100727068	100732070	789624	6	129,62,140,64,131,29,	0,829,1291,2691,3231,6337,
#Deleted in new
chr14	100726826	100738224	chr14:100726826-100738224	3	+	100727068	100734896	789624	5	309,64,131,142,4076,	0,1569,2109,5215,7322,
#Deleted in new
chr14	100726891	100735126	chr14:100726891-100735126	1	+	100727068	100734896	8553170	5	244,64,131,142,978,	0,1504,2044,5150,7257,
#Deleted in new
chr14	100726892	100728690	chr14:100726892-100728690	0	+	100726892	100726892	8553170	2	243,295,	0,1503,
#Deleted in new
chr14	100726908	100735127	chr14:100726908-100735127	1	+	100727068	100734896	789624	6	227,64,131,142,280,480,	0,1487,2027,5133,7240,7739,
#Deleted in new
chr14	100727029	100729234	chr14:100727029-100729234	1	+	100727068	100729215	789624	3	106,64,299,	0,1366,1906,
#Partially deleted in new
chr14	100779409	100829185	chr14:100779409-100829185	0	+	100779409	100779409	8553170	3	371,109,152,	0,49298,49624,
#Deleted in new
chr14	100814490	100814574	chr14:100814490-100814574	3	+	100814490	100814490	5263520	1	84,	0,
#Deleted in new
chr14	100816040	100816244	chr14:100816040-100816244	3	+	100816040	100816040	8553170	1	204,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	100826097	100861026	chr14:100826097-100861026	0	+	100826097	100826097	789624	7	120,109,754,114,134,76,336,	0,2610,2936,5323,10069,19360,34593,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	100826107	100861023	chr14:100826107-100861023	0	+	100826107	100826107	789624	7	110,109,716,130,134,76,333,	0,2600,2926,6404,10059,19350,34583,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	100826115	100861026	chr14:100826115-100861026	0	+	100826115	100826115	8553170	8	102,109,716,114,134,76,50,336,	0,2592,2918,5305,10051,19342,31223,34575,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	100826115	100860995	chr14:100826115-100860995	0	+	100826115	100826115	8553170	8	102,109,716,114,134,76,94,305,	0,2592,2918,5305,10051,19342,33675,34575,
#Partially deleted in new
chr14	100826115	100861012	chr14:100826115-100861012	1	+	100826115	100826115	8553170	8	102,109,148,41,114,134,76,322,	0,2592,2918,3593,5305,10051,19342,34575,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	100826115	100860995	chr14:100826115-100860995	0	+	100826115	100826115	8553170	8	102,109,716,79,114,134,76,305,	0,2592,2918,4900,5305,10051,19342,34575,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	100826117	100861026	chr14:100826117-100861026	0	+	100826117	100826117	789624	8	100,109,716,79,144,134,76,336,	0,2590,2916,4898,9618,10049,19340,34573,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	100826117	100861026	chr14:100826117-100861026	1	+	100826117	100826117	789624	9	100,109,716,114,130,120,134,76,336,	0,2590,2916,5303,6394,8514,10049,19340,34573,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	100826117	100861026	chr14:100826117-100861026	0	+	100826117	100826117	789624	9	100,109,716,114,141,34,134,76,336,	0,2590,2916,5303,9621,9924,10049,19340,34573,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	100826117	100845491	chr14:100826117-100845491	0	+	100826117	100826117	8553170	7	100,109,716,114,144,134,34,	0,2590,2916,5303,9618,10049,19340,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	100826117	100861012	chr14:100826117-100861012	2	+	100826117	100826117	8553170	8	100,109,716,114,134,76,378,322,	0,2590,2916,5303,10049,19340,29773,34573,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	100826117	100860996	chr14:100826117-100860996	0	+	100826117	100826117	8553170	10	100,109,716,114,130,120,144,134,76,306,	0,2590,2916,5303,6394,8514,9618,10049,19340,34573,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	100826118	100847285	chr14:100826118-100847285	1	+	100826118	100826118	8553170	7	99,109,2501,141,134,76,1410,	0,2589,2915,9620,10048,19339,19757,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	100826121	100845514	chr14:100826121-100845514	1	+	100826121	100826121	8553170	6	96,61,716,114,134,57,	0,2634,2912,5299,10045,19336,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	100826123	100834715	chr14:100826123-100834715	1	+	100826123	100826123	8553170	6	94,109,716,114,48,32,	0,2584,2910,5297,6388,8560,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	100826125	100861031	chr14:100826125-100861031	0	+	100826125	100826125	8553170	7	92,109,716,114,134,76,341,	0,2582,2908,5295,10041,19332,34565,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	100826125	100860989	chr14:100826125-100860989	0	+	100826125	100826125	789624	6	92,109,716,134,76,299,	0,2582,2908,10041,19332,34565,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	100826125	100857624	chr14:100826125-100857624	1	+	100826125	100826125	789624	7	92,109,716,114,134,76,11749,	0,2582,2908,5295,10041,19332,19750,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	100826125	100861008	chr14:100826125-100861008	0	+	100826125	100826125	5263520	8	92,109,716,114,130,134,76,318,	0,2582,2908,5295,6386,10041,19332,34565,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	100826126	100860994	chr14:100826126-100860994	0	+	100826126	100826126	8553170	8	91,109,716,114,130,134,76,304,	0,2581,2907,5294,6385,10040,19331,34564,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	100826131	100861026	chr14:100826131-100861026	0	+	100826131	100826131	789624	8	86,109,716,114,141,134,76,336,	0,2576,2902,5289,9607,10035,19326,34559,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	100826132	100833328	chr14:100826132-100833328	0	+	100826132	100826132	8553170	3	85,109,4295,	0,2575,2901,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	100826134	100836257	chr14:100826134-100836257	1	+	100826134	100826134	8553170	6	83,109,716,114,68,91,	0,2573,2899,5286,8549,10032,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	100826184	100861029	chr14:100826184-100861029	1	+	100826184	100826184	8553170	8	33,109,716,114,180,134,76,339,	0,2523,2849,5236,9185,9982,19273,34506,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	100826190	100861026	chr14:100826190-100861026	0	+	100826190	100826190	8553170	8	27,109,716,114,134,76,150,336,	0,2517,2843,5230,9976,19267,31457,34500,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	100826194	100860983	chr14:100826194-100860983	1	+	100826194	100826194	8553170	9	23,109,716,114,120,144,134,76,293,	0,2513,2839,5226,8437,9541,9972,19263,34496,
#Deleted in new
chr14	100826283	100826370	chr14:100826283-100826370	3	+	100826283	100826283	8553170	1	87,	0,
#Deleted in new
chr14	100827410	100829306	chr14:100827410-100829306	0	+	100827410	100827410	8553170	3	117,109,273,	0,1297,1623,
#Deleted in new
chr14	100829349	100829454	chr14:100829349-100829454	3	+	100829349	100829349	8553170	1	105,	0,
#Partially deleted in new
chr14	100829610	100845518	chr14:100829610-100845518	1	+	100829610	100829610	8553170	4	139,127,134,61,	0,1357,6556,15847,
#Partially deleted in new
chr14	100829651	100860773	chr14:100829651-100860773	1	+	100829651	100829651	8553170	6	1883,120,134,76,50,83,	0,4980,6515,15806,27687,31039,
#Partially deleted in new
chr14	100830604	100861021	chr14:100830604-100861021	0	+	100830604	100830604	8553170	6	930,130,120,134,76,331,	0,1907,4027,5562,14853,30086,
#Partially deleted in new
chr14	100831427	100836274	chr14:100831427-100836274	0	+	100831427	100831427	8553170	4	107,120,180,108,	0,3204,3942,4739,
#Partially deleted in new
chr14	100831427	100836257	chr14:100831427-100836257	0	+	100831427	100831427	8553170	6	107,130,120,257,141,91,	0,1084,3204,3865,4311,4739,
#Partially deleted in new
chr14	100831434	100836212	chr14:100831434-100836212	1	+	100831434	100831434	8553170	6	100,130,120,161,141,46,	0,1077,3197,3954,4304,4732,
#Partially deleted in new
chr14	100831450	100860770	chr14:100831450-100860770	0	+	100831450	100831450	8553170	6	84,120,134,76,150,80,	0,3181,4716,14007,26197,29240,
#Partially deleted in new
chr14	100831450	100860770	chr14:100831450-100860770	1	+	100831450	100831450	8553170	6	84,120,134,76,150,80,	0,3181,4716,14007,26197,29240,
#Partially deleted in new
chr14	100831480	100861026	chr14:100831480-100861026	0	+	100831480	100831480	8553170	5	54,120,134,76,336,	0,3151,4686,13977,29210,
#Partially deleted in new
chr14	100831526	100836252	chr14:100831526-100836252	1	+	100831526	100831526	8553170	5	8,130,918,141,86,	0,985,3105,4212,4640,
#Partially deleted in new
chr14	100832063	100836223	chr14:100832063-100836223	0	+	100832063	100832063	8553170	2	578,57,	0,4103,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	100832968	100861021	chr14:100832968-100861021	0	+	100832968	100832968	8553170	4	2911,134,76,331,	0,3198,12489,27722,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	100833277	100847301	chr14:100833277-100847301	1	+	100833277	100833277	8553170	2	3023,1844,	0,12180,
#Partially deleted in new
chr14	100833763	100861021	chr14:100833763-100861021	0	+	100833763	100833763	8553170	4	2312,134,76,331,	0,2403,11694,26927,
#Partially deleted in new
chr14	100834431	100861026	chr14:100834431-100861026	3	-	100834431	100834431	8553170	2	146,143,	0,26452,
#Partially deleted in new
chr14	100835525	100860816	chr14:100835525-100860816	1	+	100835525	100835525	8553170	5	354,31,134,76,126,	0,519,641,9932,25165,
#Partially deleted in new
chr14	100835719	100860987	chr14:100835719-100860987	0	+	100835719	100835719	8553170	3	581,76,297,	0,9738,24971,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr14	100836268	100947194	chr14:100836268-100947194	3	+	100836268	100836268	8553170	19	32,76,108,72,168,140,129,66,197,72,90,110,133,86,77,86,65,117,161,	0,9189,53380,58430,58603,61324,62688,69829,70667,73964,77163,99503,99909,101134,102611,104096,106493,108540,110765,
#Partially deleted in new
chr14	100845458	100853174	chr14:100845458-100853174	0	+	100845458	100845458	8553170	2	75,675,	0,7041,
#Partially deleted in new
chr14	100845480	100854268	chr14:100845480-100854268	0	+	100845480	100845480	8553170	2	53,989,	0,7799,
#Deleted in new
chr14	100852389	100852487	chr14:100852389-100852487	3	+	100852389	100852389	5263520	1	98,	0,
#Deleted in new
chr14	100857244	100861018	chr14:100857244-100861018	0	+	100857244	100857244	8553170	2	3112,270,	0,3504,
#Deleted in new
chr14	100857623	100861021	chr14:100857623-100861021	0	+	100857623	100857623	8553170	2	174,331,	0,3067,
#Deleted in new
chr14	100869059	100869148	chr14:100869059-100869148	3	+	100869059	100869059	5263520	1	89,	0,
#Deleted in new
chr14	100874492	100874585	chr14:100874492-100874585	3	+	100874492	100874492	5263520	1	93,	0,
#Deleted in new
chr14	100875032	100875104	chr14:100875032-100875104	3	+	100875032	100875032	5263520	1	72,	0,
#Partially deleted in new
chr14	100879752	100903722	chr14:100879752-100903722	3	-	100880711	100884788	8553170	4	5122,62,96,118,	0,13691,23538,23852,
#Deleted in new
chr14	100880654	100884847	chr14:100880654-100884847	1	-	100880711	100884788	789624	1	4193,	0,
#Deleted in new
chr14	100881006	100881120	chr14:100881006-100881120	3	+	100881006	100881006	5263520	1	114,	0,
#Deleted in new
chr14	100881885	100881978	chr14:100881885-100881978	3	+	100881885	100881885	5263520	1	93,	0,
#Deleted in new
chr14	100882978	100883075	chr14:100882978-100883075	3	+	100882978	100882978	5263520	1	97,	0,
#Deleted in new
chr14	100884482	100884576	chr14:100884482-100884576	3	+	100884482	100884482	5263520	1	94,	0,
#Deleted in new
chr14	100884701	100884783	chr14:100884701-100884783	3	+	100884701	100884701	5263520	1	82,	0,
#Partially deleted in new
chr14	100894769	100906968	chr14:100894769-100906968	0	+	100894769	100894769	5263520	4	270,129,66,33,	0,4187,11328,12166,
#Deleted in new
chr14	100894816	100894913	chr14:100894816-100894913	3	+	100894816	100894816	8553170	1	97,	0,
#Partially deleted in new
chr14	100894888	100907006	chr14:100894888-100907006	0	+	100894888	100894888	8553170	5	151,140,129,66,71,	0,2704,4068,11209,12047,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr14	100894963	100947079	chr14:100894963-100947079	1	+	100894963	100894963	8553170	14	76,140,129,66,197,72,90,110,86,77,86,77,117,46,	0,2629,3993,11134,11972,15269,18468,40808,42439,43916,45401,47798,49845,52070,
#Deleted in new
chr14	100897919	100897996	chr14:100897919-100897996	3	+	100897919	100897919	789624	1	77,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	100897948	100928615	chr14:100897948-100928615	1	+	100897948	100897948	8553170	7	105,129,66,197,72,90,517,	0,1008,8149,8987,12284,15483,30150,
#Deleted in new
chr14	100898957	100899079	chr14:100898957-100899079	3	+	100898957	100898957	8553170	1	122,	0,
#Deleted in new
chr14	100906043	100907101	chr14:100906043-100907101	0	+	100906043	100906043	8553170	2	120,166,	0,892,
#Deleted in new
chr14	100906097	100906163	chr14:100906097-100906163	0	+	100906097	100906097	8553170	1	66,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	100907042	100935999	chr14:100907042-100935999	0	+	100907042	100907042	8553170	4	90,72,90,228,	0,3190,6389,28729,
#Deleted in new
chr14	100911138	100911213	chr14:100911138-100911213	3	+	100911138	100911138	5263520	1	75,	0,
#Deleted in new
chr14	100924823	100924892	chr14:100924823-100924892	3	+	100924823	100924823	789624	1	69,	0,
#Deleted in new
chr14	100927341	100927413	chr14:100927341-100927413	3	+	100927341	100927341	789624	1	72,	0,
#Deleted in new
chr14	100929918	100929990	chr14:100929918-100929990	3	+	100929918	100929918	789624	1	72,	0,
#Deleted in new
chr14	100936490	100936565	chr14:100936490-100936565	3	+	100936490	100936490	789624	1	75,	0,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr14	100936491	100986938	chr14:100936491-100986938	1	+	100936491	100936491	8553170	31	997,77,86,77,64,83,62,82,71,63,83,85,65,82,159,106,36,87,87,148,77,87,85,78,86,87,82,82,87,86,320,	0,2388,3873,6270,8317,10542,12486,13023,13910,14940,17472,18430,19393,21770,23569,24535,27473,27861,30153,31147,32156,32967,35770,37634,38919,44085,46012,46969,47856,49163,50127,
#Partially deleted in new
chr14	100937400	100947076	chr14:100937400-100947076	1	+	100937400	100937400	8553170	6	88,77,86,77,85,43,	0,1479,2964,5361,7408,9633,
#Deleted in new
chr14	100938186	100938264	chr14:100938186-100938264	3	+	100938186	100938186	789624	1	78,	0,
#Partially deleted in new
chr14	100938885	100947207	chr14:100938885-100947207	1	+	100938885	100938885	8553170	5	71,86,74,64,174,	0,1479,3879,5923,8148,
#Partially deleted in new
chr14	100938927	100945160	chr14:100938927-100945160	0	+	100938927	100938927	8553170	4	29,86,74,352,	0,1437,3837,5881,
#Deleted in new
chr14	100939555	100939630	chr14:100939555-100939630	3	+	100939555	100939555	789624	1	75,	0,
#Deleted in new
chr14	100941125	100941202	chr14:100941125-100941202	3	+	100941125	100941125	789624	1	77,	0,
#Deleted in new
chr14	100943450	100943524	chr14:100943450-100943524	3	+	100943450	100943450	789624	1	74,	0,
#Deleted in new
chr14	100945648	100945720	chr14:100945648-100945720	3	+	100945648	100945648	789624	1	72,	0,
#Deleted in new
chr14	100947082	100952752	chr14:100947082-100952752	0	+	100947082	100947082	8553170	6	34,62,82,71,63,332,	0,1895,2432,3319,4349,5338,
#Partially deleted in new
chr14	100948977	100958550	chr14:100948977-100958550	1	+	100948977	100948977	8553170	8	62,82,71,63,83,85,65,289,	0,537,1424,2454,4986,5944,6907,9284,
#Partially deleted in new
chr14	100949049	100956222	chr14:100949049-100956222	0	+	100949049	100949049	8553170	7	15,82,71,63,83,85,338,	0,465,1352,2382,4914,5872,6835,
#Deleted in new
chr14	100949832	100949904	chr14:100949832-100949904	3	+	100949832	100949832	789624	1	72,	0,
#Deleted in new
chr14	100951855	100951933	chr14:100951855-100951933	3	+	100951855	100951855	789624	1	78,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	100953348	100953423	chr14:100953348-100953423	3	+	100953348	100953348	789624	1	75,	0,
#Deleted in new
chr14	100954373	100954448	chr14:100954373-100954448	3	+	100954373	100954373	789624	1	75,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	100954607	100960179	chr14:100954607-100960179	1	+	100954607	100954607	8553170	4	399,65,82,378,	0,1277,3654,5194,
#Deleted in new
chr14	100955369	100955439	chr14:100955369-100955439	3	+	100955369	100955369	789624	1	70,	0,
#Deleted in new
chr14	100956239	100956312	chr14:100956239-100956312	3	+	100956239	100956239	8553170	1	73,	0,
#Deleted in new
chr14	100957165	100957237	chr14:100957165-100957237	3	+	100957165	100957165	789624	1	72,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	100958261	100960199	chr14:100958261-100960199	0	+	100958261	100958261	8553170	2	82,398,	0,1540,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr14	100960125	100993907	chr14:100960125-100993907	0	+	100960125	100960125	8553170	21	94,106,36,87,87,148,77,87,85,78,86,118,87,82,82,87,86,88,87,82,73,	0,901,3839,4227,6519,7513,8522,9333,12136,14000,15285,17479,20451,22378,23335,24222,25529,26493,27418,28583,33709,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	100961026	100967040	chr14:100961026-100967040	1	+	100961026	100961026	8553170	4	106,36,87,396,	0,2938,3326,5618,
#Deleted in new
chr14	100963053	100963130	chr14:100963053-100963130	3	+	100963053	100963053	789624	1	77,	0,
#Deleted in new
chr14	100966028	100966100	chr14:100966028-100966100	3	+	100966028	100966028	789624	1	72,	0,
#Partially deleted in new
chr14	100966644	101038859	chr14:100966644-101038859	3	+	100966644	100966644	8553170	29	87,148,77,87,85,78,86,87,82,82,87,86,88,87,82,87,75,73,31,66,87,236,13,88,70,61,237,50,95,	0,994,2003,2814,5617,7481,8766,13932,15859,16816,17703,19010,19974,20899,22064,23049,24846,27190,30241,30842,31380,39377,42913,43546,60701,63981,69337,70949,72120,
#Deleted in new
chr14	100967051	100967123	chr14:100967051-100967123	3	+	100967051	100967051	789624	1	72,	0,
#Partially deleted in new
chr14	100967651	100987280	chr14:100967651-100987280	0	+	100967651	100967651	5263520	12	135,77,87,85,78,86,87,82,82,87,86,662,	0,996,1807,4610,6474,7759,12925,14852,15809,16696,18003,18967,
#Deleted in new
chr14	100968110	100968185	chr14:100968110-100968185	3	+	100968110	100968110	789624	1	75,	0,
#Deleted in new
chr14	100968947	100969022	chr14:100968947-100969022	3	+	100968947	100968947	789624	1	75,	0,
#Partially deleted in new
chr14	100969533	100986803	chr14:100969533-100986803	0	+	100969533	100969533	8553170	11	12,85,78,86,118,87,82,82,87,86,185,	0,2728,4592,5877,8071,11043,12970,13927,14814,16121,17085,
#Deleted in new
chr14	100969878	100969952	chr14:100969878-100969952	3	+	100969878	100969878	789624	1	74,	0,
#Deleted in new
chr14	100972102	100972177	chr14:100972102-100972177	3	+	100972102	100972102	789624	1	75,	0,
#Deleted in new
chr14	100972669	100972741	chr14:100972669-100972741	3	+	100972669	100972669	789624	1	72,	0,
#Deleted in new
chr14	100973594	100973664	chr14:100973594-100973664	3	+	100973594	100973594	789624	1	70,	0,
#Deleted in new
chr14	100974805	100974880	chr14:100974805-100974880	3	+	100974805	100974805	789624	1	75,	0,
#Deleted in new
chr14	100975824	100975896	chr14:100975824-100975896	3	+	100975824	100975824	789624	1	72,	0,
#Deleted in new
chr14	100976476	100976551	chr14:100976476-100976551	3	+	100976476	100976476	789624	1	75,	0,
#Deleted in new
chr14	100977388	100977466	chr14:100977388-100977466	3	+	100977388	100977388	8553170	1	78,	0,
#Partially deleted in new
chr14	100979001	100979090	chr14:100979001-100979090	3	+	100979001	100979001	8553170	1	89,	0,
#Partially deleted in new
chr14	100979991	100980066	chr14:100979991-100980066	3	+	100979991	100979991	8553170	1	75,	0,
#Partially deleted in new
chr14	100981003	100981075	chr14:100981003-100981075	3	+	100981003	100981003	789624	1	72,	0,
#Partially deleted in new
chr14	100981974	100982046	chr14:100981974-100982046	3	+	100981974	100981974	789624	1	72,	0,
#Partially deleted in new
chr14	100982925	100982997	chr14:100982925-100982997	3	+	100982925	100982925	789624	1	72,	0,
#Partially deleted in new
chr14	100983875	100983947	chr14:100983875-100983947	3	+	100983875	100983875	789624	1	72,	0,
#Partially deleted in new
chr14	100984385	100998543	chr14:100984385-100998543	1	+	100984385	100984385	8553170	11	49,86,88,87,82,87,75,73,31,60,519,	0,1269,2233,3158,4323,5308,7105,9449,12500,13101,13639,
#Partially deleted in new
chr14	100984776	100984848	chr14:100984776-100984848	3	+	100984776	100984776	789624	1	72,	0,
#Partially deleted in new
chr14	100986056	100986128	chr14:100986056-100986128	3	+	100986056	100986056	789624	1	72,	0,
#Partially deleted in new
chr14	100987045	100987117	chr14:100987045-100987117	3	+	100987045	100987045	789624	1	72,	0,
#Partially deleted in new
chr14	100988160	100988230	chr14:100988160-100988230	3	+	100988160	100988160	789624	1	70,	0,
#Partially deleted in new
chr14	100989129	100989201	chr14:100989129-100989201	3	+	100989129	100989129	789624	1	72,	0,
#Partially deleted in new
chr14	100990090	100990160	chr14:100990090-100990160	3	+	100990090	100990090	789624	1	70,	0,
#Deleted in new
chr14	100991918	100991990	chr14:100991918-100991990	3	+	100991918	100991918	789624	1	72,	0,
#Deleted in new
chr14	100993235	100993310	chr14:100993235-100993310	3	+	100993235	100993235	789624	1	75,	0,
#Deleted in new
chr14	100994256	100994330	chr14:100994256-100994330	3	+	100994256	100994256	8553170	1	74,	0,
#Deleted in new
chr14	100998466	100998541	chr14:100998466-100998541	3	+	100998466	100998466	8553170	1	75,	0,
#Deleted in new
chr14	101022065	101022132	chr14:101022065-101022132	3	+	101022065	101022065	5263520	1	67,	0,
#Deleted in new
chr14	101023324	101023420	chr14:101023324-101023420	3	+	101023324	101023324	5263520	1	96,	0,
#Deleted in new
chr14	101023793	101023856	chr14:101023793-101023856	3	+	101023793	101023793	5263520	1	63,	0,
#Deleted in new
chr14	101025016	101025077	chr14:101025016-101025077	3	+	101025016	101025016	5263520	1	61,	0,
#Deleted in new
chr14	101025563	101025651	chr14:101025563-101025651	3	+	101025563	101025563	5263520	1	88,	0,
#Deleted in new
chr14	101025731	101025817	chr14:101025731-101025817	3	+	101025731	101025731	5263520	1	86,	0,
#Deleted in new
chr14	101026019	101026107	chr14:101026019-101026107	3	+	101026019	101026019	5263520	1	88,	0,
#Deleted in new
chr14	101026784	101026864	chr14:101026784-101026864	3	+	101026784	101026784	5263520	1	80,	0,
#Deleted in new
chr14	101027099	101027183	chr14:101027099-101027183	3	+	101027099	101027099	5263520	1	84,	0,
#Deleted in new
chr14	101029633	101029714	chr14:101029633-101029714	3	+	101029633	101029633	5263520	1	81,	0,
#Deleted in new
chr14	101030051	101030129	chr14:101030051-101030129	3	+	101030051	101030051	5263520	1	78,	0,
#Deleted in new
chr14	101031986	101032064	chr14:101031986-101032064	3	+	101031986	101031986	5263520	1	78,	0,
#Deleted in new
chr14	101033754	101033836	chr14:101033754-101033836	3	+	101033754	101033754	5263520	1	82,	0,
#Deleted in new
chr14	101039689	101039755	chr14:101039689-101039755	3	+	101039689	101039689	5263520	1	66,	0,
#Deleted in new
chr14	101040068	101040148	chr14:101040068-101040148	3	+	101040068	101040068	5263520	1	80,	0,
#Deleted in new
chr14	101040218	101040299	chr14:101040218-101040299	3	+	101040218	101040218	5263520	1	81,	0,
#Deleted in new
chr14	101040435	101040535	chr14:101040435-101040535	3	+	101040435	101040435	5263520	1	100,	0,
#Deleted in new
chr14	101040781	101040849	chr14:101040781-101040849	3	+	101040781	101040781	5263520	1	68,	0,
#Deleted in new
chr14	101041362	101041445	chr14:101041362-101041445	3	+	101041362	101041362	5263520	1	83,	0,
#Deleted in new
chr14	101042976	101043062	chr14:101042976-101043062	3	+	101042976	101042976	5263520	1	86,	0,
#Deleted in new
chr14	101044197	101044283	chr14:101044197-101044283	3	+	101044197	101044197	5263520	1	86,	0,
#Partially deleted in new
chr14	101045156	101051795	chr14:101045156-101051795	3	+	101045156	101045156	789624	3	28,203,194,	0,5910,6445,
#Deleted in new
chr14	101045919	101045994	chr14:101045919-101045994	3	+	101045919	101045919	5263520	1	75,	0,
#Deleted in new
chr14	101046454	101046538	chr14:101046454-101046538	3	+	101046454	101046454	5263520	1	84,	0,
#Deleted in new
chr14	101047320	101047398	chr14:101047320-101047398	3	+	101047320	101047320	5263520	1	78,	0,
#Deleted in new
chr14	101047900	101047979	chr14:101047900-101047979	3	+	101047900	101047900	5263520	1	79,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	101048657	101048748	chr14:101048657-101048748	3	+	101048657	101048657	5263520	1	91,	0,
#Deleted in new
chr14	101049549	101049646	chr14:101049549-101049646	3	+	101049549	101049549	5263520	1	97,	0,
#Deleted in new
chr14	101052445	101052525	chr14:101052445-101052525	3	+	101052445	101052445	5263520	1	80,	0,
#Deleted in new
chr14	101054305	101054381	chr14:101054305-101054381	3	+	101054305	101054305	5263520	1	76,	0,
#Deleted in new
chr14	101054686	101054759	chr14:101054686-101054759	3	+	101054686	101054686	5263520	1	73,	0,
#Deleted in new
chr14	101055257	101055323	chr14:101055257-101055323	3	+	101055257	101055257	5263520	1	66,	0,
#Deleted in new
chr14	101055418	101055491	chr14:101055418-101055491	3	+	101055418	101055418	5263520	1	73,	0,
#Deleted in new
chr14	101056218	101056300	chr14:101056218-101056300	3	+	101056218	101056218	5263520	1	82,	0,
#Deleted in new
chr14	101059754	101059838	chr14:101059754-101059838	3	+	101059754	101059754	5263520	1	84,	0,
#Deleted in new
chr14	101060572	101060674	chr14:101060572-101060674	3	+	101060572	101060572	5263520	1	102,	0,
#Deleted in new
chr14	101062049	101062118	chr14:101062049-101062118	3	+	101062049	101062049	5263520	1	69,	0,
#Partially deleted in new
chr14	101064150	101072937	chr14:101064150-101072937	3	+	101064150	101064150	8553170	7	217,49,201,104,132,174,579,	0,1517,1691,4887,5773,6291,8208,
#Deleted in new
chr14	101064494	101064578	chr14:101064494-101064578	3	+	101064494	101064494	5263520	1	84,	0,
#Deleted in new
chr14	101065299	101065378	chr14:101065299-101065378	3	+	101065299	101065299	5263520	1	79,	0,
#Deleted in new
chr14	101065446	101065537	chr14:101065446-101065537	3	+	101065446	101065446	5263520	1	91,	0,
#Deleted in new
chr14	101065597	101065667	chr14:101065597-101065667	3	+	101065597	101065597	5263520	1	70,	0,
#Deleted in new
chr14	101065911	101065991	chr14:101065911-101065991	3	+	101065911	101065911	5263520	1	80,	0,
#Deleted in new
chr14	101066723	101066801	chr14:101066723-101066801	3	+	101066723	101066723	5263520	1	78,	0,
#Deleted in new
chr14	101069910	101072934	chr14:101069910-101072934	1	+	101069910	101069910	789624	2	145,2493,	0,531,
#Deleted in new
chr14	101071806	101072558	chr14:101071806-101072558	0	+	101071806	101071806	8553170	2	185,200,	0,552,
#Partially deleted in new
chr14	101073868	101077675	chr14:101073868-101077675	0	-	101073868	101073868	8553170	3	261,173,104,	0,2665,3703,
#Partially deleted in new
chr14	101073895	101077671	chr14:101073895-101077671	1	-	101073895	101073895	8553170	4	234,81,173,100,	0,585,2638,3676,
#Partially deleted in new
chr14	101073952	101077910	chr14:101073952-101077910	3	-	101073952	101073952	8553170	4	177,81,173,138,	0,528,2581,3820,
#Deleted in new
chr14	101076304	101076769	chr14:101076304-101076769	0	-	101076304	101076304	8553170	2	29,236,	0,229,
#Deleted in new
chr14	101076589	101077539	chr14:101076589-101077539	1	-	101076589	101076589	8553170	2	117,434,	0,516,
#Deleted in new
chr14	101120855	101123542	chr14:101120855-101123542	3	+	101120855	101120855	789624	2	289,654,	0,2033,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	101145479	101145695	chr14:101145479-101145695	3	-	101145479	101145479	8553170	1	216,	0,
#Deleted in new
chr14	101217371	101218241	chr14:101217371-101218241	7	-	101217371	101217371	16724991	1	870,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	101257331	101278318	chr14:101257331-101278318	3	+	101257331	101257331	8553170	2	500,1990,	0,18997,
#Partially deleted in new
chr14	101332515	101334331	chr14:101332515-101334331	3	-	101332515	101332515	8553170	2	348,99,	0,1717,
#Deleted in new
chr14	101405986	101407922	chr14:101405986-101407922	3	-	101405986	101405986	789624	2	238,180,	0,1756,
#Partially deleted in new
chr14	101442075	101444315	chr14:101442075-101444315	3	+	101442075	101442075	789624	2	182,334,	0,1906,
#Partially deleted in new
chr14	101447641	101457117	chr14:101447641-101457117	3	+	101447641	101447641	8553170	3	18,125,370,	0,1105,9106,
#Partially deleted in new
chr14	101552220	101560403	chr14:101552220-101560403	0	-	101552220	101552220	789624	2	534,152,	0,8031,
#Partially deleted in new
chr14	101552222	101555676	chr14:101552222-101555676	0	-	101552222	101552222	8553170	2	532,453,	0,3001,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	101552222	101555676	chr14:101552222-101555676	3	-	101552222	101552222	5263520	2	2020,453,	0,3001,
#Deleted in new
chr14	101557303	101560375	chr14:101557303-101560375	1	-	101557303	101557303	789624	4	516,202,226,124,	0,1329,2496,2948,
#Deleted in new
chr14	101557303	101560411	chr14:101557303-101560411	0	-	101557303	101557303	8553170	1	3108,	0,
#Deleted in new
chr14	101557303	101560422	chr14:101557303-101560422	0	-	101557303	101557303	789624	2	1531,171,	0,2948,
#Deleted in new
chr14	101557303	101558776	chr14:101557303-101558776	1	-	101557303	101557303	8553170	3	191,66,144,	0,450,1329,
#Deleted in new
chr14	101557303	101560431	chr14:101557303-101560431	1	-	101557303	101557303	789624	3	1531,226,180,	0,2496,2948,
#Deleted in new
chr14	101557307	101560403	chr14:101557307-101560403	0	-	101557307	101557307	789624	3	512,202,152,	0,1325,2944,
#Deleted in new
chr14	101557307	101560403	chr14:101557307-101560403	1	-	101557307	101557307	789624	4	187,171,202,152,	0,341,1325,2944,
#Deleted in new
chr14	101558552	101560306	chr14:101558552-101560306	0	-	101558552	101558552	8553170	2	282,507,	0,1247,
#Deleted in new
chr14	101559587	101560392	chr14:101559587-101560392	0	-	101559587	101559587	8553170	2	438,141,	0,664,
#Deleted in new
chr14	101560286	101560422	chr14:101560286-101560422	3	-	101560286	101560286	5263520	1	136,	0,
#Deleted in new
chr14	101561350	101563452	chr14:101561350-101563452	3	+	101561496	101562411	789624	1	2102,	0,
#Partially deleted in new
chr14	101628983	101632530	chr14:101628983-101632530	3	-	101628983	101628983	8553170	2	421,118,	0,3429,
#Partially deleted in new
chr14	101634453	101731108	chr14:101634453-101731108	3	-	101634453	101634453	8553170	3	226,173,55,	0,862,96600,
#Partially deleted in new
chr14	101677942	101678380	chr14:101677942-101678380	7	+	101677942	101677942	16724991	1	438,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	101730436	101732522	chr14:101730436-101732522	3	+	101730436	101730436	789624	4	51,112,189,287,	0,920,1351,1799,
#Partially deleted in new
chr14	101761797	101927989	chr14:101761797-101927989	1	+	101761893	101925272	0	16	123,66,94,200,111,93,131,60,109,54,171,128,102,73,117,2849,	0,1107,57194,94888,120363,121459,121634,128439,131202,132709,139921,144604,147791,150603,156033,163343,
#Partially deleted in new
chr14	101761861	101836573	chr14:101761861-101836573	1	+	101761893	101836180	789624	5	59,66,166,104,405,	0,1043,24156,69839,74307,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	101761861	101821098	chr14:101761861-101821098	0	+	101761861	101761861	8553170	4	59,66,166,3072,	0,1043,24156,56165,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	101761869	101767049	chr14:101761869-101767049	1	+	101761893	101765267	789624	3	51,66,1896,	0,1035,3284,
#Partially deleted in new
chr14	101761884	101927685	chr14:101761884-101927685	1	+	101761893	101925272	0	15	36,66,166,200,111,93,131,60,109,54,171,128,102,73,2545,	0,1020,24133,94801,120276,121372,121547,128352,131115,132622,139834,144517,147704,150516,163256,
#Partially deleted in new
chr14	101761899	101925623	chr14:101761899-101925623	0	+	101761899	101925272	789624	16	21,66,94,200,111,93,131,60,109,54,171,128,102,73,117,483,	0,1005,57092,94786,120261,121357,121532,128337,131100,132607,139819,144502,147689,150501,155931,163241,
#Partially deleted in new
chr14	101762904	101824229	chr14:101762904-101824229	0	+	101762904	101762904	8553170	3	66,166,216,	0,23113,61109,
#Partially deleted in new
chr14	101762927	101836451	chr14:101762927-101836451	0	+	101762927	101836398	789624	3	43,166,283,	0,23090,73241,
#Partially deleted in new
chr14	101786110	101797701	chr14:101786110-101797701	0	+	101786110	101797227	789624	2	73,491,	0,11100,
#Partially deleted in new
chr14	101786120	101789896	chr14:101786120-101789896	0	+	101786120	101786120	8553170	2	63,216,	0,3560,
#Partially deleted in new
chr14	101796554	101810321	chr14:101796554-101810321	3	-	101796554	101796554	8553170	2	343,105,	0,13662,
#Partially deleted in new
chr14	101809802	101927519	chr14:101809802-101927519	1	+	101809942	101925272	0	13	234,200,111,93,131,60,109,54,171,128,102,73,2379,	0,46883,72358,73454,73629,80434,83197,84704,91916,96599,99786,102598,115338,
#Partially deleted in new
chr14	101809833	101893053	chr14:101809833-101893053	0	+	101809942	101893053	789624	6	203,200,111,131,60,54,	0,46852,72327,73598,80403,83166,
#Partially deleted in new
chr14	101809834	101836701	chr14:101809834-101836701	1	+	101809942	101836398	789624	2	202,533,	0,26334,
#Partially deleted in new
chr14	101809836	101882205	chr14:101809836-101882205	0	+	101809942	101824060	789624	4	200,156,200,45,	0,14177,46849,72324,
#Partially deleted in new
chr14	101809865	101883016	chr14:101809865-101883016	0	+	101809865	101809865	8553170	3	171,200,856,	0,46820,72295,
#Partially deleted in new
chr14	101809868	101836432	chr14:101809868-101836432	1	+	101809942	101836180	789624	3	168,104,264,	0,21832,26300,
#Partially deleted in new
chr14	101809894	101927977	chr14:101809894-101927977	3	+	101809942	101925272	0	14	142,200,111,93,131,60,109,54,171,128,102,73,117,2837,	0,46791,72266,73362,73537,80342,83105,84612,91824,96507,99694,102506,107936,115246,
#Partially deleted in new
chr14	101809894	101912625	chr14:101809894-101912625	1	+	101809942	101912497	0	12	142,200,111,93,131,60,109,54,171,128,102,225,	0,46791,72266,73362,73537,80342,83105,84612,91824,96507,99694,102506,
#Partially deleted in new
chr14	101809904	101906647	chr14:101809904-101906647	1	+	101809942	101906533	789624	10	132,200,111,93,131,60,109,54,171,246,	0,46781,72256,73352,73527,80332,83095,84602,91814,96497,
#Partially deleted in new
chr14	101823652	101856757	chr14:101823652-101856757	0	+	101823652	101823652	8553170	3	229,156,72,	0,361,33033,
#Partially deleted in new
chr14	101823877	101836525	chr14:101823877-101836525	0	+	101823877	101823877	8553170	2	64,357,	0,12291,
#Deleted in new
chr14	101824161	101824478	chr14:101824161-101824478	0	+	101824161	101824161	8553170	1	317,	0,
#Partially deleted in new
chr14	101824837	101856885	chr14:101824837-101856885	0	+	101824837	101824837	8553170	2	85,200,	0,31848,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	101833434	101839531	chr14:101833434-101839531	3	-	101833434	101833434	8553170	2	73,526,	0,5571,
#Deleted in new
chr14	101843393	101844122	chr14:101843393-101844122	7	-	101843393	101843393	16724991	1	729,	0,
#Partially deleted in new
chr14	101879221	101883562	chr14:101879221-101883562	0	+	101879221	101879221	8553170	4	142,111,93,131,	0,2939,4035,4210,
#Partially deleted in new
chr14	101882160	101894517	chr14:101882160-101894517	0	+	101882160	101890248	789624	5	111,93,60,109,11,	0,1096,8076,10839,12346,
#Partially deleted in new
chr14	101882204	101912600	chr14:101882204-101912600	0	+	101882204	101882204	8553170	9	67,93,131,60,109,54,171,102,200,	0,1052,1227,8032,10795,12302,19514,27384,30196,
#Partially deleted in new
chr14	101883301	101901744	chr14:101883301-101901744	0	+	101883301	101890012	789624	6	48,131,211,109,54,26,	0,130,6680,9698,11205,18417,
#Partially deleted in new
chr14	101883536	101912625	chr14:101883536-101912625	0	+	101883536	101912442	789624	6	26,60,109,54,171,225,	0,6700,9463,10970,18182,28864,
#Partially deleted in new
chr14	101889792	101893053	chr14:101889792-101893053	0	+	101889792	101889792	8553170	2	504,54,	0,3207,
#Partially deleted in new
chr14	101901856	101912624	chr14:101901856-101912624	0	+	101901856	101912411	789624	4	33,128,102,220,	0,4545,7732,10548,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	101906504	101921382	chr14:101906504-101921382	0	+	101906504	101921230	789624	5	25,102,73,117,290,	0,3084,5896,11326,14588,
#Partially deleted in new
chr14	101909647	101925307	chr14:101909647-101925307	0	+	101909647	101914195	789624	5	43,73,398,117,167,	0,2753,4527,8183,15493,
#Partially deleted in new
chr14	101917768	101925449	chr14:101917768-101925449	0	+	101917768	101917768	8553170	2	179,309,	0,7372,
#Deleted in new
chr14	101948346	101949425	chr14:101948346-101949425	3	+	101948346	101948346	8553170	1	1079,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	101952415	101953063	chr14:101952415-101953063	3	+	101952415	101952415	8553170	1	648,	0,
#Boundary problem: need 78, got 0, diff 78, mapped 0.0
chr14	101964509	102056443	chr14:101964509-102056443	3	+	101964691	102050563	0	78	438,88,174,256,187,272,228,1077,180,150,147,141,177,111,120,240,156,114,111,210,147,167,174,166,189,195,283,101,160,244,184,213,239,157,228,231,141,234,207,122,166,164,130,134,115,162,215,205,174,120,121,196,118,216,213,128,154,147,151,254,135,95,175,76,161,112,61,124,114,171,218,104,212,154,143,169,128,6009,	0,11202,14809,15209,15854,18509,18872,21177,22943,24193,27017,29674,30163,30476,30671,32525,35479,35776,36444,36635,37025,38027,38282,40008,40252,40532,41378,42498,43668,45333,45766,46230,47365,47804,50595,51346,51839,52256,52578,52873,53941,55383,58241,62064,62664,62873,63109,63427,65029,65309,65652,67762,68555,68759,69466,69815,71979,73950,74188,74491,74902,75128,75726,76088,77064,77503,77718,77874,78125,79365,79764,80085,83307,84006,84930,85204,85561,85925,
#Partially deleted in new
chr14	101964572	102011733	chr14:101964572-102011733	0	+	101964572	101964572	8553170	31	375,88,174,256,187,272,228,1077,180,150,147,141,177,111,120,240,156,114,111,210,147,167,174,433,195,283,101,160,244,184,994,	0,11139,14746,15146,15791,18446,18809,21114,22880,24130,26954,29611,30100,30413,30608,32462,35416,35713,36381,36572,36962,37964,38219,39945,40469,41315,42435,43605,45270,45703,46167,
#Partially deleted in new
chr14	101964687	101975799	chr14:101964687-101975799	0	+	101964687	101964687	8553170	2	260,86,	0,11026,
#Deleted in new
chr14	101969363	101969601	chr14:101969363-101969601	7	-	101969363	101969363	16724991	1	238,	0,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr14	102008226	102037417	chr14:102008226-102037417	0	+	102008226	102036660	789624	29	111,244,184,213,239,157,228,231,141,234,207,122,166,164,130,134,115,162,215,205,174,120,121,196,118,216,213,128,929,	0,1616,2049,2513,3648,4087,6878,7629,8122,8539,8861,9156,10224,11666,14524,18347,18947,19156,19392,19710,21312,21592,21935,24045,24838,25042,25749,26098,28262,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	102008248	102017991	chr14:102008248-102017991	0	+	102008248	102008248	8553170	10	89,244,184,213,239,157,228,1144,207,609,	0,1594,2027,2491,3626,4065,6856,7607,8839,9134,
#Partially deleted in new
chr14	102009319	102012867	chr14:102009319-102012867	0	+	102009319	102009319	8553170	3	767,1838,554,	0,956,2994,
#Partially deleted in new
chr14	102009381	102016048	chr14:102009381-102016048	0	+	102009381	102009381	8553170	7	705,184,213,239,157,228,193,	0,894,1358,2493,2932,5723,6474,
#Partially deleted in new
chr14	102011978	102050154	chr14:102011978-102050154	0	+	102011978	102011978	8553170	44	135,157,228,231,651,207,122,166,164,130,134,115,162,215,205,174,120,121,196,118,216,213,128,154,147,151,254,135,95,175,76,161,112,61,124,114,171,218,104,212,154,143,169,84,	0,335,3126,3877,4370,5109,5404,6472,7914,10772,14595,15195,15404,15640,15958,17560,17840,18183,20293,21086,21290,21997,22346,24510,26481,26719,27022,27433,27659,28257,28619,29595,30034,30249,30405,30656,31896,32295,32616,35838,36537,37461,37735,38092,
#Partially deleted in new
chr14	102012372	102017619	chr14:102012372-102017619	0	+	102012372	102017508	789624	7	98,228,231,141,234,207,237,	0,2732,3483,3976,4393,4715,5010,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	102012440	102023810	chr14:102012440-102023810	0	+	102012440	102012440	8553170	9	30,228,634,234,207,122,166,164,1060,	0,2664,3415,4325,4647,4942,6010,7452,10310,
#Partially deleted in new
chr14	102016846	102050785	chr14:102016846-102050785	0	+	102016846	102042059	789624	39	153,207,122,166,164,130,134,115,162,215,205,174,120,121,196,118,216,213,128,154,147,151,254,135,95,161,112,61,124,114,171,218,104,212,154,143,169,128,351,	0,241,536,1604,3046,5904,9727,10327,10536,10772,11090,12692,12972,13315,15425,16218,16422,17129,17478,19642,21613,21851,22154,22565,22791,24727,25166,25381,25537,25788,27028,27427,27748,30970,31669,32593,32867,33224,33588,
#Partially deleted in new
chr14	102017204	102050784	chr14:102017204-102050784	0	+	102017204	102050563	789624	39	90,122,166,164,130,134,115,162,215,205,174,120,121,196,118,216,213,128,154,151,254,135,95,175,76,161,112,61,124,114,171,218,104,212,154,143,169,128,350,	0,178,1246,2688,5546,9369,9969,10178,10414,10732,12334,12614,12957,15067,15860,16064,16771,17120,19284,21493,21796,22207,22433,23031,23393,24369,24808,25023,25179,25430,26670,27069,27390,30612,31311,32235,32509,32866,33230,
#Partially deleted in new
chr14	102020033	102027452	chr14:102020033-102027452	0	+	102020033	102020033	8553170	4	23,130,134,70,	0,2717,6540,7349,
#Partially deleted in new
chr14	102026947	102027628	chr14:102026947-102027628	0	+	102026947	102026947	8553170	3	341,162,10,	0,435,671,
#Partially deleted in new
chr14	102027506	102029833	chr14:102027506-102029833	0	+	102027506	102027506	8553170	4	327,205,174,15,	0,430,2032,2312,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr14	102028010	102043119	chr14:102028010-102043119	0	+	102028010	102028010	8553170	22	131,174,120,121,196,118,216,213,128,154,147,151,254,135,95,175,76,161,112,61,124,485,	0,1528,1808,2151,4261,5054,5258,5965,6314,8478,10449,10687,10990,11401,11627,12225,12587,13563,14002,14217,14373,14624,
#Partially deleted in new
chr14	102028059	102050773	chr14:102028059-102050773	0	+	102028059	102050416	789624	31	82,174,120,121,196,118,216,213,128,154,147,151,254,135,95,175,76,161,112,61,124,114,171,218,104,212,154,143,169,128,360,	0,1479,1759,2102,4212,5005,5209,5916,6265,8429,10400,10638,10941,11352,11578,12176,12538,13514,13953,14168,14324,14575,15815,16214,16535,19757,20456,21380,21654,22011,22354,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	102028271	102030711	chr14:102028271-102030711	0	+	102028271	102028271	8553170	3	1441,120,550,	0,1547,1890,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	102032278	102037407	chr14:102032278-102037407	0	+	102032278	102032278	8553170	4	904,216,213,3083,	0,990,1697,2046,
#Partially deleted in new
chr14	102032434	102050671	chr14:102032434-102050671	0	+	102032434	102032434	8553170	26	33,118,216,213,128,154,147,151,254,135,95,175,76,161,112,61,124,114,171,218,104,212,1067,169,128,237,	0,630,834,1541,1890,4054,6025,6263,6566,6977,7203,7801,8163,9139,9578,9793,9949,10200,11440,11839,12160,15382,16081,17279,17636,18000,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	102032853	102037041	chr14:102032853-102037041	0	+	102032853	102032853	8553170	2	329,3773,	0,415,
#Partially deleted in new
chr14	102033064	102037793	chr14:102033064-102037793	0	+	102033064	102037591	789624	6	118,216,213,128,154,301,	0,204,911,1260,3424,4428,
#Partially deleted in new
chr14	102033095	102034357	chr14:102033095-102034357	0	+	102033095	102033095	8553170	4	87,216,213,23,	0,173,880,1239,
#Partially deleted in new
chr14	102033156	102050716	chr14:102033156-102050716	0	+	102033156	102033156	8553170	25	26,216,213,128,154,147,151,254,135,95,175,76,161,112,61,365,171,218,104,212,154,143,169,128,282,	0,112,819,1168,3332,5303,5541,5844,6255,6481,7079,7441,8417,8856,9071,9227,10718,11117,11438,14660,15359,16283,16557,16914,17278,
#Partially deleted in new
chr14	102036314	102044403	chr14:102036314-102044403	5	-	102036314	102036314	16724991	2	455,111,	0,7978,
#Partially deleted in new
chr14	102036524	102050786	chr14:102036524-102050786	0	+	102036524	102050405	789624	21	118,147,151,254,135,95,175,76,161,112,61,124,114,171,218,104,212,154,143,169,716,	0,1935,2173,2476,2887,3113,3711,4073,5049,5488,5703,5859,6110,7350,7749,8070,11292,11991,12915,13189,13546,
#Partially deleted in new
chr14	102036646	102052854	chr14:102036646-102052854	4	-	102036646	102036646	16724991	2	123,328,	0,15880,
#Partially deleted in new
chr14	102036668	102066228	chr14:102036668-102066228	7	-	102036668	102036668	16724991	3	101,139,207,	0,13776,29353,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr14	102037523	102049533	chr14:102037523-102049533	0	+	102037523	102037523	8553170	15	1325,254,135,95,175,76,161,112,61,124,114,171,218,104,1717,	0,1477,1888,2114,2712,3074,4050,4489,4704,4860,5111,6351,6750,7071,10293,
#Deleted in new
chr14	102038377	102039096	chr14:102038377-102039096	0	+	102038377	102038377	8553170	3	229,151,96,	0,320,623,
#Partially deleted in new
chr14	102039490	102042279	chr14:102039490-102042279	0	+	102039490	102039490	8553170	6	242,175,76,161,112,52,	0,745,1107,2083,2522,2737,
#Partially deleted in new
chr14	102039545	102050773	chr14:102039545-102050773	0	+	102039545	102039545	8553170	15	187,161,112,61,124,114,171,218,104,212,154,143,169,128,339,	0,2028,2467,2682,2838,3089,4329,4728,5049,8271,8970,9894,10168,10525,10889,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	102040319	102042391	chr14:102040319-102042391	0	+	102040319	102040319	8553170	5	91,1137,112,61,8,	0,278,1693,1908,2064,
#Deleted in new
chr14	102041659	102042730	chr14:102041659-102042730	0	+	102041659	102041659	8553170	2	465,503,	0,568,
#Partially deleted in new
chr14	102041898	102050773	chr14:102041898-102050773	0	+	102041898	102041898	8553170	13	226,61,124,114,171,218,104,212,154,143,169,128,339,	0,329,485,736,1976,2375,2696,5918,6617,7541,7815,8172,8536,
#Partially deleted in new
chr14	102042117	102050773	chr14:102042117-102050773	0	+	102042117	102042117	8553170	11	7,61,124,114,171,218,104,212,1067,169,703,	0,110,266,517,1757,2156,2477,5699,6398,7596,7953,
#Partially deleted in new
chr14	102042396	102043697	chr14:102042396-102043697	0	+	102042396	102042396	8553170	3	111,114,336,	0,238,965,
#Partially deleted in new
chr14	102042713	102050746	chr14:102042713-102050746	0	+	102042713	102049714	789624	10	35,171,218,104,212,154,172,169,128,312,	0,1161,1560,1881,5103,5802,6726,7000,7357,7721,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	102043132	102045302	chr14:102043132-102045302	0	+	102043132	102043132	8553170	1	2170,	0,
#Deleted in new
chr14	102043324	102044970	chr14:102043324-102044970	0	+	102043324	102043324	8553170	3	721,218,376,	0,949,1270,
#Deleted in new
chr14	102047660	102048729	chr14:102047660-102048729	0	+	102047660	102047660	8553170	2	368,214,	0,855,
#Deleted in new
chr14	102047662	102050771	chr14:102047662-102050771	0	+	102047662	102047662	8553170	4	1920,169,128,337,	0,2051,2408,2772,
#Deleted in new
chr14	102047664	102050763	chr14:102047664-102050763	0	+	102047664	102047664	8553170	2	2534,329,	0,2770,
#Deleted in new
chr14	102047737	102050792	chr14:102047737-102050792	0	+	102047737	102047737	8553170	5	291,154,443,128,358,	0,778,1702,2333,2697,
#Partially deleted in new
chr14	102052547	102052854	chr14:102052547-102052854	5	-	102052547	102052547	16724991	1	307,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	102077179	102077472	chr14:102077179-102077472	3	-	102077179	102077179	8553170	1	293,	0,
#Partially deleted in new
chr14	102080737	102087191	chr14:102080737-102087191	3	-	102081711	102086378	0	11	1084,334,269,148,191,166,318,134,367,162,206,	0,1373,2296,2808,3055,3661,3943,4560,5020,5479,6248,
#Partially deleted in new
chr14	102081048	102139686	chr14:102081048-102139686	1	-	102081711	102139404	0	12	773,334,269,148,191,166,318,134,367,162,211,437,	0,1062,1985,2497,2744,3350,3632,4249,4709,5168,20826,58201,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr14	102082664	102086331	chr14:102082664-102086331	0	-	102085389	102086331	789624	7	638,148,191,166,318,134,115,	0,881,1128,1734,2016,2633,3552,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	102083441	102084234	chr14:102083441-102084234	0	-	102083441	102083441	8553170	2	252,442,	0,351,
#Partially deleted in new
chr14	102083895	102084798	chr14:102083895-102084798	0	-	102083895	102083895	8553170	2	88,400,	0,503,
#Deleted in new
chr14	102084932	102087044	chr14:102084932-102087044	0	-	102084932	102086378	789624	5	66,134,160,162,59,	0,365,1032,1284,2053,
#Deleted in new
chr14	102084979	102085707	chr14:102084979-102085707	0	-	102084979	102084979	8553170	2	19,410,	0,318,
#Deleted in new
chr14	102085885	102087044	chr14:102085885-102087044	0	-	102085885	102085885	8553170	2	493,59,	0,1100,
#Partially deleted in new
chr14	102085918	102139465	chr14:102085918-102139465	0	-	102086290	102139404	789624	3	206,162,216,	0,298,53331,
#Partially deleted in new
chr14	102101937	102139699	chr14:102101937-102139699	0	-	102101937	102139404	789624	2	145,450,	0,37312,
#Partially deleted in new
chr14	102139502	102208683	chr14:102139502-102208683	0	+	102139502	102139502	8553170	3	227,183,81,	0,55435,69100,
#Partially deleted in new
chr14	102139843	102223673	chr14:102139843-102223673	3	+	102139923	102222883	0	4	329,183,1260,844,	0,55094,68759,82986,
#Partially deleted in new
chr14	102139851	102223667	chr14:102139851-102223667	1	+	102139923	102222883	789624	5	321,183,93,1260,838,	0,55086,57903,68751,82978,
#Partially deleted in new
chr14	102139874	102215005	chr14:102139874-102215005	1	+	102139923	102212582	0	4	298,183,93,2486,	0,55063,57880,72645,
#Partially deleted in new
chr14	102139892	102210530	chr14:102139892-102210530	1	+	102139923	102209880	0	3	280,183,1928,	0,55045,68710,
#Partially deleted in new
chr14	102139892	102210521	chr14:102139892-102210521	0	+	102139923	102193474	0	4	280,52,183,1660,	0,53570,55045,68969,
#Partially deleted in new
chr14	102139892	102223671	chr14:102139892-102223671	1	+	102139923	102222883	0	3	280,1260,842,	0,68710,82937,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	102139892	102167666	chr14:102139892-102167666	0	+	102139892	102139892	8553170	2	280,261,	0,27513,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	102139896	102198429	chr14:102139896-102198429	1	+	102139923	102198401	789624	3	276,183,127,	0,55041,58406,
#Partially deleted in new
chr14	102139910	102210525	chr14:102139910-102210525	1	+	102139923	102193474	0	3	262,13,1923,	0,53552,68692,
#Partially deleted in new
chr14	102139913	102210134	chr14:102139913-102210134	1	+	102139923	102209880	0	4	259,183,93,1532,	0,55024,57841,68689,
#Partially deleted in new
chr14	102139914	102223358	chr14:102139914-102223358	0	+	102139923	102194945	789624	3	73,183,529,	0,55023,82915,
#Partially deleted in new
chr14	102139923	102210470	chr14:102139923-102210470	1	+	102139923	102209880	0	2	249,1868,	0,68679,
#Partially deleted in new
chr14	102139980	102197979	chr14:102139980-102197979	0	+	102139980	102139980	8553170	4	192,183,31,225,	0,54957,55893,57774,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	102157258	102208889	chr14:102157258-102208889	0	+	102208689	102208889	789624	3	62,183,287,	0,37679,51344,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	102171380	102208852	chr14:102171380-102208852	0	+	102171380	102171380	8553170	3	130,183,250,	0,23557,37222,
#Partially deleted in new
chr14	102178911	102208939	chr14:102178911-102208939	0	+	102178911	102178911	8553170	3	65,183,337,	0,16026,29691,
#Partially deleted in new
chr14	102178941	102208902	chr14:102178941-102208902	0	+	102178941	102178941	8553170	4	35,183,93,300,	0,15996,18813,29661,
#Partially deleted in new
chr14	102191240	102208848	chr14:102191240-102208848	0	+	102191240	102191240	8553170	3	131,183,246,	0,3697,17362,
#Partially deleted in new
chr14	102194945	102224847	chr14:102194945-102224847	0	+	102194945	102224642	789624	2	175,247,	0,29655,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	102224499	102240607	chr14:102224499-102240607	0	-	102226328	102232598	789624	5	295,1314,174,102,156,	0,595,8035,9188,15952,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	102224499	102225672	chr14:102224499-102225672	0	-	102224499	102224499	8553170	2	295,453,	0,720,
#Partially deleted in new
chr14	102224655	102251804	chr14:102224655-102251804	0	-	102224778	102251804	789624	5	139,174,102,179,49,	0,7879,9032,26156,27100,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	102225945	102247464	chr14:102225945-102247464	0	-	102225945	102225945	8553170	3	463,102,70,	0,7742,21449,
#Partially deleted in new
chr14	102226139	102235424	chr14:102226139-102235424	1	-	102226328	102232598	789624	4	269,137,102,60,	0,6395,7548,9225,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	102228826	102232725	chr14:102228826-102232725	0	-	102228826	102228826	8553170	2	540,3269,	0,630,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr14	102228826	102305168	chr14:102228826-102305168	0	-	102251937	102304968	789624	9	536,201,115,1255,179,49,79,115,207,	0,630,2880,3708,21985,22929,23090,54651,76135,
#Duplicated in new
chr14	102228830	102240621	chr14:102228830-102240621	1	-	102229343	102232598	789624	6	536,201,174,102,47,170,	0,626,3704,4857,9487,11621,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	102228830	102264651	chr14:102228830-102264651	0	-	102228830	102228830	8553170	10	536,201,115,174,102,176,167,49,79,1106,	0,626,2876,3704,4857,21981,22613,22925,23086,34715,
#Partially deleted in new
chr14	102228835	102305189	chr14:102228835-102305189	0	-	102228835	102228835	8553170	11	531,201,115,174,102,176,552,71,90,115,228,	0,621,2871,3699,4852,21976,22608,34710,36987,54642,76126,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	102228838	102305176	chr14:102228838-102305176	0	-	102228838	102228838	8553170	11	528,201,115,1255,179,49,79,71,90,115,215,	0,618,2868,3696,21973,22917,23078,34707,36984,54639,76123,
#Partially deleted in new
chr14	102228838	102305151	chr14:102228838-102305151	1	-	102229288	102304968	789624	12	528,201,115,174,102,176,49,79,71,90,115,190,	0,618,2868,3696,4849,21973,22917,23078,34707,36984,54639,76123,
#Duplicated in new
chr14	102228838	102240597	chr14:102228838-102240597	1	-	102229343	102232598	789624	5	528,201,137,102,146,	0,618,3696,4849,11613,
#Duplicated in new
chr14	102228838	102240611	chr14:102228838-102240611	1	-	102229343	102232598	789624	5	528,201,174,102,160,	0,618,3696,4849,11613,
#Partially deleted in new
chr14	102228840	102305200	chr14:102228840-102305200	3	-	102229288	102304968	789624	12	526,201,115,174,102,179,49,79,71,90,115,239,	0,616,2866,3694,4847,21971,22915,23076,34705,36982,54637,76121,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	102228885	102235435	chr14:102228885-102235435	1	-	102229343	102232598	789624	5	481,201,804,326,71,	0,571,3649,4578,6479,
#Partially deleted in new
chr14	102229072	102246247	chr14:102229072-102246247	0	-	102229072	102229072	8553170	3	585,102,191,	0,4615,16984,
#Partially deleted in new
chr14	102229119	102246159	chr14:102229119-102246159	1	-	102229343	102232598	789624	4	538,174,102,103,	0,3415,4568,16937,
#Partially deleted in new
chr14	102229136	102305185	chr14:102229136-102305185	1	-	102229288	102304968	789624	11	230,201,115,174,102,179,49,79,71,115,224,	0,320,2570,3398,4551,21675,22619,22780,34409,54341,75825,
#Partially deleted in new
chr14	102229213	102231821	chr14:102229213-102231821	0	-	102229432	102231821	789624	2	444,115,	0,2493,
#Partially deleted in new
chr14	102229266	102238446	chr14:102229266-102238446	1	-	102229343	102232598	789624	4	391,174,102,129,	0,3268,4421,9051,
#Partially deleted in new
chr14	102229432	102235063	chr14:102229432-102235063	0	-	102229432	102232598	789624	4	225,174,102,107,	0,3102,4255,5524,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	102229438	102238098	chr14:102229438-102238098	0	-	102229438	102229438	8553170	6	219,115,137,122,37,77,	0,2268,3096,4249,5926,8583,
#Partially deleted in new
chr14	102229577	102235569	chr14:102229577-102235569	0	-	102229577	102229577	8553170	5	80,115,137,102,205,	0,2129,2957,4110,5787,
#Duplicated in new
chr14	102229619	102240611	chr14:102229619-102240611	0	-	102229619	102229619	8553170	5	32,115,137,102,160,	0,2087,2915,4068,10832,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	102231745	102234153	chr14:102231745-102234153	0	-	102231745	102231745	8553170	3	76,137,466,	0,789,1942,
#Partially deleted in new
chr14	102232552	102305137	chr14:102232552-102305137	0	-	102251937	102304968	789624	6	119,102,179,79,115,176,	0,1135,18259,19364,50925,72409,
#Partially deleted in new
chr14	102233760	102305155	chr14:102233760-102305155	0	-	102251937	102304968	789624	7	29,179,49,79,90,115,194,	0,17051,17995,18156,32062,49717,71201,
#Partially deleted in new
chr14	102250811	102305147	chr14:102250811-102305147	0	-	102250811	102250811	8553170	4	176,79,115,186,	0,1105,32666,54150,
#Partially deleted in new
chr14	102250837	102305178	chr14:102250837-102305178	0	-	102251937	102304968	789624	5	150,49,79,115,217,	0,918,1079,32640,54124,
#Partially deleted in new
chr14	102250894	102305134	chr14:102250894-102305134	0	-	102251565	102304968	789624	8	93,167,49,79,71,90,115,173,	0,549,861,1022,12651,14928,32583,54067,
#Partially deleted in new
chr14	102250966	102305154	chr14:102250966-102305154	0	-	102278681	102304968	789624	6	24,49,79,89,115,193,	0,789,950,27639,32511,53995,
#Partially deleted in new
chr14	102251466	102305154	chr14:102251466-102305154	0	-	102251937	102304968	789624	5	144,49,79,115,193,	0,289,450,32011,53495,
#Partially deleted in new
chr14	102251504	102305190	chr14:102251504-102305190	0	-	102251504	102251504	8553170	6	106,49,79,71,115,229,	0,251,412,12041,31973,53457,
#Partially deleted in new
chr14	102251742	102305150	chr14:102251742-102305150	0	-	102251742	102251742	8553170	3	253,115,189,	0,31735,53219,
#Partially deleted in new
chr14	102251960	102305135	chr14:102251960-102305135	0	-	102278681	102304968	789624	6	35,71,90,89,115,174,	0,11585,13862,26645,31517,53001,
#Partially deleted in new
chr14	102260590	102305147	chr14:102260590-102305147	0	-	102260590	102260590	8553170	5	82,71,90,115,186,	0,2955,5232,22887,44371,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	102263536	102305142	chr14:102263536-102305142	0	-	102278681	102304968	789624	5	80,152,89,115,181,	0,13762,15069,19941,41425,
#Partially deleted in new
chr14	102280673	102305166	chr14:102280673-102305166	0	-	102280673	102280673	8553170	3	151,115,205,	0,2804,24288,
#Partially deleted in new
chr14	102283130	102305139	chr14:102283130-102305139	0	-	102283130	102283130	8553170	2	462,178,	0,21831,
#Partially deleted in new
chr14	102317376	102342364	chr14:102317376-102342364	1	+	102326044	102342179	789624	8	290,903,225,93,150,138,130,1042,	0,8608,14245,17177,18312,21439,21717,23946,
#Partially deleted in new
chr14	102319297	102342367	chr14:102319297-102342367	1	+	102326044	102342179	789624	8	221,903,225,93,150,138,130,1045,	0,6687,12324,15256,16391,19518,19796,22025,
#Partially deleted in new
chr14	102319750	102342367	chr14:102319750-102342367	3	+	102319765	102342179	789624	8	303,903,225,93,150,138,130,1045,	0,6234,11871,14803,15938,19065,19343,21572,
#Partially deleted in new
chr14	102319957	102342367	chr14:102319957-102342367	0	+	102319957	102336649	789624	9	96,903,225,93,150,85,138,130,1045,	0,6027,11664,14596,15731,16677,18858,19136,21365,
#Partially deleted in new
chr14	102326827	102342702	chr14:102326827-102342702	0	+	102326827	102342179	789624	6	60,93,150,138,130,1380,	0,7726,8861,11988,12266,14495,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	102331521	102338830	chr14:102331521-102338830	0	+	102334640	102338830	789624	4	325,93,150,15,	0,3032,4167,7294,
#Partially deleted in new
chr14	102331638	102342367	chr14:102331638-102342367	0	+	102331638	102342179	789624	6	208,93,150,138,136,1045,	0,2915,4050,7177,7455,9684,
#Partially deleted in new
chr14	102331691	102342367	chr14:102331691-102342367	0	+	102331691	102342179	789624	6	155,93,150,138,130,265,	0,2862,3997,7124,7402,10411,
#Partially deleted in new
chr14	102331713	102342364	chr14:102331713-102342364	0	+	102331713	102342179	789624	5	133,93,138,130,262,	0,2840,7102,7380,10389,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	102334932	102342367	chr14:102334932-102342367	0	+	102334932	102334932	8553170	4	906,138,130,1045,	0,3883,4161,6390,
#Partially deleted in new
chr14	102335687	102341976	chr14:102335687-102341976	0	+	102335687	102341533	789624	4	151,138,130,457,	0,3128,3406,5832,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	102336916	102342367	chr14:102336916-102342367	0	+	102336916	102336916	8553170	4	810,138,130,1045,	0,1899,2177,4406,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	102341101	102362916	chr14:102341101-102362916	0	-	102348556	102362851	789624	6	3288,481,130,130,169,72,	0,7177,8817,14666,18317,21743,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	102342618	102359595	chr14:102342618-102359595	0	-	102348556	102359595	789624	6	108,755,481,130,130,177,	0,1016,5660,7300,13149,16800,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	102347036	102348147	chr14:102347036-102348147	0	-	102347036	102347036	8553170	2	419,139,	0,972,
#Partially deleted in new
chr14	102348281	102362892	chr14:102348281-102362892	3	-	102348556	102362851	789624	5	478,130,130,169,48,	0,1637,7486,11137,14563,
#Partially deleted in new
chr14	102348484	102362714	chr14:102348484-102362714	1	-	102348556	102362625	789624	5	275,130,130,169,141,	0,1434,7283,10934,14089,
#Partially deleted in new
chr14	102348510	102362868	chr14:102348510-102362868	1	-	102348708	102362851	789624	4	249,130,169,24,	0,7257,10908,14334,
#Partially deleted in new
chr14	102349918	102362914	chr14:102349918-102362914	0	-	102349918	102349918	8553170	4	130,126,169,70,	0,5853,9500,12926,
#Partially deleted in new
chr14	102350005	102362914	chr14:102350005-102362914	0	-	102352519	102362851	789624	5	43,137,130,169,70,	0,2413,5762,9413,12839,
#Partially deleted in new
chr14	102355537	102362870	chr14:102355537-102362870	0	-	102355537	102355537	8553170	3	360,169,26,	0,3881,7307,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr14	102362962	102502481	chr14:102362962-102502481	3	+	102376721	102498257	789624	20	154,291,129,132,158,313,133,333,977,184,174,181,142,241,90,234,149,142,150,4379,	0,13687,44375,45525,51673,62016,65287,68833,71272,75059,77473,80684,82843,86666,87597,89431,102178,134016,134607,135140,
#Partially deleted in new
chr14	102363060	102425272	chr14:102363060-102425272	0	+	102363060	102363060	8553170	6	56,291,129,132,158,262,	0,13589,44277,45427,51575,61950,
#Partially deleted in new
chr14	102363078	102465671	chr14:102363078-102465671	1	+	102376721	102465304	789624	17	38,291,129,132,158,313,133,333,977,184,174,181,142,241,90,234,531,	0,13571,44259,45409,51557,61900,65171,68717,71156,74943,77357,80568,82727,86550,87481,89315,102062,
#Partially deleted in new
chr14	102434838	102443682	chr14:102434838-102443682	0	+	102434838	102434838	8553170	5	98,92,184,174,36,	0,281,3183,5597,8808,
#Partially deleted in new
chr14	102438276	102445833	chr14:102438276-102445833	0	+	102438276	102438276	8553170	4	187,174,181,28,	0,2159,5370,7529,
#Deleted in new
chr14	102496880	102498224	chr14:102496880-102498224	0	+	102496880	102496880	8553170	3	240,150,122,	0,689,1222,
#Deleted in new
chr14	102497538	102498412	chr14:102497538-102498412	0	+	102497538	102497538	8553170	2	181,310,	0,564,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	102501675	102501779	chr14:102501675-102501779	3	+	102501675	102501675	8553170	1	104,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	102501759	102509791	chr14:102501759-102509791	3	-	102506935	102507889	789624	4	6183,75,206,263,	0,6715,6881,7769,
#Deleted in new
chr14	102506841	102508817	chr14:102506841-102508817	1	-	102506935	102507889	789624	2	1101,343,	0,1633,
#Deleted in new
chr14	102506875	102509799	chr14:102506875-102509799	1	-	102506935	102507889	789624	3	1067,75,271,	0,1599,2653,
#Deleted in new
chr14	102507110	102509235	chr14:102507110-102509235	0	-	102507110	102507889	789624	3	832,75,595,	0,1364,1530,
#Deleted in new
chr14	102507573	102508911	chr14:102507573-102508911	0	-	102507573	102507889	789624	3	369,75,176,	0,901,1162,
#Deleted in new
chr14	102539643	102539726	chr14:102539643-102539726	3	+	102539643	102539643	5263520	1	83,	0,
#Partially deleted in new
chr14	102545253	102555826	chr14:102545253-102555826	3	+	102545253	102545253	789624	3	323,163,1117,	0,5092,9456,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	102582887	102583177	chr14:102582887-102583177	3	-	102582887	102582887	8553170	1	290,	0,
#Partially deleted in new
chr14	102592660	102730576	chr14:102592660-102730576	3	+	102592886	102726506	0	12	527,60,84,53,162,119,79,195,78,58,230,4109,	0,605,89234,108617,114690,115804,118274,121762,128346,128659,129526,133807,
#Deleted in new
chr14	102662239	102662708	chr14:102662239-102662708	7	-	102662239	102662239	16724991	1	469,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	102695387	102695495	chr14:102695387-102695495	3	+	102695387	102695387	8553170	1	108,	0,
#Partially deleted in new
chr14	102710741	102714452	chr14:102710741-102714452	0	+	102710741	102710741	8553170	2	272,30,	0,3681,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	102720925	102721551	chr14:102720925-102721551	0	+	102720925	102720925	8553170	2	159,232,	0,394,
#Partially deleted in new
chr14	102721021	102726585	chr14:102721021-102726585	0	+	102721021	102722231	789624	3	63,230,118,	0,1165,5446,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	102770039	102774791	chr14:102770039-102774791	3	-	102770039	102770039	8553170	2	416,151,	0,4601,
#Partially deleted in new
chr14	102771134	102774765	chr14:102771134-102774765	1	-	102771134	102771134	8553170	2	439,125,	0,3506,
#Partially deleted in new
chr14	102777475	102911500	chr14:102777475-102911500	3	+	102870201	102905784	0	11	200,262,52,105,168,81,75,93,141,175,6288,	0,92709,94441,98148,98882,108713,112084,113849,119785,125779,127737,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	102777478	102911499	chr14:102777478-102911499	1	+	102870201	102905784	789624	11	197,139,262,52,105,168,81,93,141,175,6287,	0,52855,92706,94438,98145,98879,108710,113846,119782,125776,127734,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	102777556	102906261	chr14:102777556-102906261	1	+	102870201	102905784	0	12	119,139,262,52,105,168,81,75,93,141,175,1049,	0,52777,92628,94360,98067,98801,108632,112003,113768,119704,125698,127656,
#Partially deleted in new
chr14	102777601	102906021	chr14:102777601-102906021	1	+	102870201	102905784	0	8	74,262,52,105,168,141,175,809,	0,92583,94315,98022,98756,119659,125653,127611,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr14	102830353	102906255	chr14:102830353-102906255	1	+	102870201	102905784	789624	10	119,262,52,105,168,81,93,141,175,1043,	0,39831,41563,45270,46004,55835,60971,66907,72901,74859,
#Partially deleted in new
chr14	102871926	102897307	chr14:102871926-102897307	0	+	102871926	102895132	789624	8	42,105,168,81,75,93,127,47,	0,3697,4431,14262,17633,19398,23146,25334,
#Deleted in new
chr14	102875674	102876677	chr14:102875674-102876677	0	+	102875674	102875674	8553170	2	54,320,	0,683,
#Partially deleted in new
chr14	102875686	102905463	chr14:102875686-102905463	0	+	102875686	102905463	789624	6	42,168,93,141,175,251,	0,671,15638,21574,27568,29526,
#Partially deleted in new
chr14	102922655	102931192	chr14:102922655-102931192	3	+	102922688	102930680	789624	12	76,119,45,88,218,138,109,83,163,163,88,617,	0,1055,1279,5770,6102,6465,6772,6999,7268,7509,7750,7920,
#Partially deleted in new
chr14	102922921	102930841	chr14:102922921-102930841	0	+	102922921	102922921	8553170	11	908,45,88,218,138,109,83,163,163,88,266,	0,1013,5504,5836,6199,6506,6733,7002,7243,7484,7654,
#Deleted in new
chr14	102928644	102933596	chr14:102928644-102933596	0	+	102928644	102928644	8553170	9	614,109,83,163,163,88,827,141,584,	0,783,1010,1279,1520,1761,2943,3959,4368,
#Deleted in new
chr14	102928691	102929475	chr14:102928691-102929475	0	+	102928691	102928691	8553170	3	284,138,48,	0,429,736,
#Deleted in new
chr14	102928808	102929475	chr14:102928808-102929475	0	+	102928808	102929475	789624	3	134,138,48,	0,312,619,
#Deleted in new
chr14	102928829	102930591	chr14:102928829-102930591	0	+	102928829	102930591	789624	4	126,163,88,16,	0,1335,1576,1746,
#Deleted in new
chr14	102930106	102930619	chr14:102930106-102930619	0	+	102930106	102930106	8553170	2	221,214,	0,299,
#Partially deleted in new
chr14	102932378	103057462	chr14:102932378-103057462	3	-	102933711	103057173	0	37	1465,71,106,118,118,85,98,597,63,217,82,140,137,106,78,87,80,95,149,106,125,106,245,111,243,134,120,167,80,249,201,94,149,96,84,92,464,	0,5725,5927,7231,7451,7667,7848,11512,13283,14089,15342,17386,18087,20119,21819,22223,27252,30682,32123,33903,34667,35874,36093,37772,39540,41637,43305,43504,45747,48394,51177,54108,67186,71549,76093,79718,124620,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	102933573	102937177	chr14:102933573-102937177	3	+	102933573	102933573	8553170	2	592,236,	0,3368,
#Deleted in new
chr14	102939907	102940747	chr14:102939907-102940747	0	-	102939907	102939907	8553170	3	40,85,521,	0,138,319,
#Deleted in new
chr14	102939915	102940726	chr14:102939915-102940726	0	-	102939915	102939915	8553170	2	32,681,	0,130,
#Deleted in new
chr14	102943812	102945724	chr14:102943812-102945724	0	-	102943812	102943812	8553170	2	675,63,	0,1849,
#Deleted in new
chr14	102944010	102945331	chr14:102944010-102945331	0	-	102944010	102944010	8553170	2	477,158,	0,1163,
#Partially deleted in new
chr14	102944042	102968532	chr14:102944042-102968532	0	-	102944042	102968532	789624	15	445,63,217,82,140,137,106,87,80,95,149,106,125,106,61,	0,1619,2425,3678,5722,6423,8455,10559,15588,19018,20459,22239,23003,24210,24429,
#Partially deleted in new
chr14	102949856	102956290	chr14:102949856-102956290	0	-	102949856	102949856	8553170	6	48,137,106,78,87,51,	0,609,2641,4341,4745,6383,
#Partially deleted in new
chr14	102986297	103004023	chr14:102986297-103004023	0	-	102986435	103004023	789624	3	283,149,96,	0,13267,17630,
#Partially deleted in new
chr14	102986509	103004279	chr14:102986509-103004279	0	-	102986509	102986509	8553170	3	71,149,352,	0,13055,17418,
#Partially deleted in new
chr14	103041468	103042094	chr14:103041468-103042094	7	+	103041468	103041468	16724991	1	626,	0,
#Partially deleted in new
chr14	103084209	103090027	chr14:103084209-103090027	3	+	103086012	103089797	789624	4	138,106,157,331,	0,1766,3875,5487,
#Partially deleted in new
chr14	103094722	103098885	chr14:103094722-103098885	3	+	103094722	103094722	8553170	2	118,268,	0,3895,
#Partially deleted in new
chr14	103100143	103110271	chr14:103100143-103110271	3	+	103100219	103110223	789624	11	470,655,112,123,101,81,115,120,153,122,241,	0,1974,3797,4123,4594,4848,6641,7280,7487,8252,9887,
#Partially deleted in new
chr14	103100327	103104328	chr14:103100327-103104328	0	+	103100327	103104328	789624	3	286,112,62,	0,3613,3939,
#Partially deleted in new
chr14	103102376	103110547	chr14:103102376-103110547	0	+	103102376	103102376	8553170	8	396,112,806,115,120,153,122,517,	0,1564,1890,4408,5047,5254,6019,7654,
#Deleted in new
chr14	103103551	103104328	chr14:103103551-103104328	0	+	103103551	103103551	8553170	2	501,62,	0,715,
#Deleted in new
chr14	103104349	103110064	chr14:103104349-103110064	0	+	103104349	103104997	789624	7	40,81,115,120,153,122,34,	0,642,2435,3074,3281,4046,5681,
#Deleted in new
chr14	103107515	103110559	chr14:103107515-103110559	0	+	103107515	103110539	789624	5	28,153,122,154,200,	0,115,880,2515,2844,
#Deleted in new
chr14	103107621	103110559	chr14:103107621-103110559	0	+	103107621	103107621	8553170	3	162,122,529,	0,774,2409,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	103120846	103122909	chr14:103120846-103122909	3	-	103120846	103120846	789624	2	185,301,	0,1762,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	103120852	103123007	chr14:103120852-103123007	0	-	103120852	103120852	8553170	2	179,148,	0,2007,
#Deleted in new
chr14	103123441	103130033	chr14:103123441-103130033	0	+	103123441	103123441	8553170	4	42,383,115,32,	0,2868,6298,6560,
#Deleted in new
chr14	103123460	103126575	chr14:103123460-103126575	0	+	103126457	103126575	789624	3	23,132,266,	0,914,2849,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	103123460	103137439	chr14:103123460-103137439	3	+	103126457	103135360	789624	12	491,383,625,115,123,101,99,124,123,156,122,2221,	0,2849,3544,6279,6541,6854,7591,8178,9289,9901,10221,11758,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	103126326	103137439	chr14:103126326-103137439	1	+	103126457	103135360	789624	11	366,625,115,123,101,99,124,123,156,122,2221,	0,678,3413,3675,3988,4725,5312,6423,7035,7355,8892,
#Deleted in new
chr14	103126388	103135651	chr14:103126388-103135651	0	+	103126457	103127442	789624	11	176,227,115,123,101,99,124,123,156,122,433,	0,1014,3351,3613,3926,4663,5250,6361,6973,7293,8830,
#Deleted in new
chr14	103126388	103135651	chr14:103126388-103135651	0	+	103126457	103130060	789624	8	304,123,101,99,124,123,122,433,	0,3613,3926,4663,5250,6361,7293,8830,
#Deleted in new
chr14	103127565	103131762	chr14:103127565-103131762	0	+	103127565	103127565	8553170	5	64,385,101,99,124,	0,2174,2749,3486,4073,
#Deleted in new
chr14	103127575	103135650	chr14:103127575-103135650	0	+	103127575	103135360	789624	9	54,123,101,99,124,123,156,122,432,	0,2426,2739,3476,4063,5174,5786,6106,7643,
#Deleted in new
chr14	103131095	103133765	chr14:103131095-103133765	0	+	103131095	103132722	789624	5	55,124,171,156,84,	0,543,1606,2266,2586,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	103132747	103136682	chr14:103132747-103136682	0	+	103132747	103136003	789624	5	125,156,122,133,874,	0,614,934,2471,3061,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	103136402	103137432	chr14:103136402-103137432	0	+	103136402	103136402	8553170	2	52,551,	0,479,
#Deleted in new
chr14	103139674	103140069	chr14:103139674-103140069	5	+	103139674	103139674	16724991	1	395,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	103139880	103141959	chr14:103139880-103141959	7	+	103139880	103139880	16724991	1	2079,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	103148596	103149408	chr14:103148596-103149408	7	+	103148596	103148596	16724991	2	374,141,	0,671,
#Partially deleted in new
chr14	103184203	103185039	chr14:103184203-103185039	7	+	103184203	103184203	16724991	2	464,63,	0,773,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	103187220	103189028	chr14:103187220-103189028	3	-	103187220	103187220	789624	3	1050,71,437,	0,1156,1371,
#Deleted in new
chr14	103207747	103207789	chr14:103207747-103207789	7	+	103207747	103207747	16724991	1	42,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	103208099	103208876	chr14:103208099-103208876	3	+	103208099	103208099	8553170	1	777,	0,
#Partially deleted in new
chr14	103241491	103241972	chr14:103241491-103241972	7	+	103241491	103241491	16724991	1	481,	0,
#Deleted in new
chr14	103279222	103279700	chr14:103279222-103279700	5	+	103279222	103279222	16724991	1	478,	0,
#Deleted in new
chr14	103279312	103279955	chr14:103279312-103279955	7	+	103279312	103279312	16724991	1	643,	0,
#Deleted in new
chr14	103282932	103283468	chr14:103282932-103283468	7	+	103282932	103282932	16724991	1	536,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	103331673	103332367	chr14:103331673-103332367	3	-	103331673	103331673	8553170	1	694,	0,
#Deleted in new
chr14	103333543	103335844	chr14:103333543-103335844	0	+	103333543	103333543	8553170	3	120,209,192,	0,845,2109,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr14	103334001	103345025	chr14:103334001-103345025	3	+	103335860	103341052	0	12	259,209,280,82,173,112,146,159,162,165,135,4063,	0,387,1651,2034,2675,3114,4325,4733,5170,5637,6425,6961,
#Deleted in new
chr14	103334188	103336178	chr14:103334188-103336178	0	+	103334188	103334188	8553170	4	72,209,280,143,	0,200,1464,1847,
#Partially deleted in new
chr14	103334191	103336825	chr14:103334191-103336825	0	+	103335860	103336825	789624	4	69,280,82,149,	0,1461,1844,2485,
#Deleted in new
chr14	103334236	103336117	chr14:103334236-103336117	0	+	103335860	103336117	789624	3	361,280,82,	0,1416,1799,
#Partially deleted in new
chr14	103334386	103337227	chr14:103334386-103337227	0	+	103335860	103337227	789624	5	211,141,82,173,112,	0,1405,1649,2290,2729,
#Partially deleted in new
chr14	103334386	103337227	chr14:103334386-103337227	0	+	103334386	103334386	8553170	4	211,280,173,112,	0,1266,2290,2729,
#Partially deleted in new
chr14	103334391	103338750	chr14:103334391-103338750	0	+	103335860	103338750	789624	7	206,137,82,173,112,146,16,	0,1404,1644,2285,2724,3935,4343,
#Partially deleted in new
chr14	103334802	103336849	chr14:103334802-103336849	0	+	103335860	103336849	789624	4	34,280,82,173,	0,850,1233,1874,
#Partially deleted in new
chr14	103334860	103342640	chr14:103334860-103342640	1	+	103335860	103341052	0	11	325,280,82,173,112,146,159,162,165,135,1678,	0,792,1175,1816,2255,3466,3874,4311,4778,5566,6102,
#Partially deleted in new
chr14	103334893	103336728	chr14:103334893-103336728	0	+	103335860	103336728	789624	4	169,280,82,52,	0,759,1142,1783,
#Partially deleted in new
chr14	103334895	103336849	chr14:103334895-103336849	0	+	103335860	103336849	789624	4	143,280,82,173,	0,757,1140,1781,
#Partially deleted in new
chr14	103334948	103343228	chr14:103334948-103343228	1	+	103335860	103341052	0	10	984,82,173,112,146,159,162,165,135,2266,	0,1087,1728,2167,3378,3786,4223,4690,5478,6014,
#Partially deleted in new
chr14	103335480	103336886	chr14:103335480-103336886	0	+	103335480	103335480	8553170	3	452,82,210,	0,555,1196,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	103336505	103338851	chr14:103336505-103338851	0	+	103336505	103336505	8553170	4	344,112,146,117,	0,610,1821,2229,
#Partially deleted in new
chr14	103336684	103338348	chr14:103336684-103338348	0	+	103336684	103336684	8553170	2	543,22,	0,1642,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	103336763	103337737	chr14:103336763-103337737	0	+	103336763	103336763	8553170	2	86,622,	0,352,
#Deleted in new
chr14	103337848	103337974	chr14:103337848-103337974	3	+	103337848	103337848	789624	1	126,	0,
#Deleted in new
chr14	103338176	103338824	chr14:103338176-103338824	0	+	103338176	103338176	8553170	2	296,90,	0,558,
#Partially deleted in new
chr14	103338734	103340561	chr14:103338734-103340561	0	+	103338734	103338734	8553170	3	159,632,135,	0,437,1692,
#Deleted in new
chr14	103340403	103341356	chr14:103340403-103341356	0	+	103340403	103340403	8553170	2	158,394,	0,559,
#Deleted in new
chr14	103340969	103342386	chr14:103340969-103342386	0	+	103340969	103340969	8553170	2	156,228,	0,1189,
#Deleted in new
chr14	103364238	103364820	chr14:103364238-103364820	7	-	103364238	103364238	16724991	1	582,	0,
#Deleted in new
chr14	103374032	103374916	chr14:103374032-103374916	7	-	103374032	103374032	16724991	1	884,	0,
#Partially deleted in new
chr14	103385391	103503252	chr14:103385391-103503252	1	+	103386029	103503227	0	16	689,192,54,49,66,71,57,120,100,113,154,218,104,258,27,371,	0,19684,42995,63527,66526,71750,77013,80580,80951,81687,82641,89601,94995,106385,113110,117490,
#Partially deleted in new
chr14	103385410	103428440	chr14:103385410-103428440	0	+	103385410	103385410	8553170	3	287,192,54,	0,19665,42976,
#Partially deleted in new
chr14	103385416	103428445	chr14:103385416-103428445	0	+	103385416	103385416	8553170	4	281,40,192,59,	0,624,19659,42970,
#Partially deleted in new
chr14	103385452	103503360	chr14:103385452-103503360	1	+	103386029	103503227	0	17	628,192,54,49,66,71,69,57,237,120,100,113,154,218,104,258,479,	0,19623,42934,63466,66465,71689,73274,76952,80104,80519,80890,81626,82580,89540,94934,106324,117429,
#Partially deleted in new
chr14	103385519	103503826	chr14:103385519-103503826	1	+	103386029	103503227	0	18	561,192,54,49,66,71,57,237,120,100,113,154,218,104,258,27,45,945,	0,19556,42867,63399,66398,71622,76885,80037,80452,80823,81559,82513,89473,94867,106257,112982,114636,117362,
#Partially deleted in new
chr14	103385540	103503831	chr14:103385540-103503831	3	+	103386029	103503227	0	16	540,192,54,49,66,71,57,237,120,100,113,154,218,104,258,950,	0,19535,42846,63378,66377,71601,76864,80016,80431,80802,81538,82492,89452,94846,106236,117341,
#Partially deleted in new
chr14	103385859	103503826	chr14:103385859-103503826	1	+	103386029	103503227	0	16	221,192,54,49,66,71,57,237,120,100,113,106,218,104,258,945,	0,19216,42527,63059,66058,71282,76545,79697,80112,80483,81219,82221,89133,94527,105917,117022,
#Partially deleted in new
chr14	103385984	103503245	chr14:103385984-103503245	1	+	103386029	103503227	0	17	96,192,54,49,66,71,57,237,120,100,113,154,218,104,258,45,364,	0,19091,42402,62934,65933,71157,76420,79572,79987,80358,81094,82048,89008,94402,105792,114171,116897,
#Partially deleted in new
chr14	103385986	103465606	chr14:103385986-103465606	0	+	103386029	103465606	789624	7	94,192,49,66,71,57,50,	0,19089,62932,65931,71155,76418,79570,
#Partially deleted in new
chr14	103386003	103465898	chr14:103386003-103465898	0	+	103386003	103386003	8553170	8	77,192,54,49,66,71,57,342,	0,19072,42383,62915,65914,71138,76401,79553,
#Partially deleted in new
chr14	103386029	103503227	chr14:103386029-103503227	1	+	103386029	103503227	789624	19	51,192,54,49,66,71,69,57,237,120,100,113,154,218,104,258,27,45,346,	0,19046,42357,62889,65888,71112,72697,76375,79527,79942,80313,81049,82003,88963,94357,105747,112472,114126,116852,
#Partially deleted in new
chr14	103386238	103451995	chr14:103386238-103451995	0	+	103386373	103451995	789624	5	150,192,54,49,78,	0,18837,42148,62680,65679,
#Partially deleted in new
chr14	103405133	103503066	chr14:103405133-103503066	0	+	103405133	103405133	8553170	6	134,54,49,66,258,185,	0,23253,43785,46784,86643,97748,
#Deleted in new
chr14	103412118	103412761	chr14:103412118-103412761	7	-	103412118	103412118	16724991	1	643,	0,
#Partially deleted in new
chr14	103417272	103465706	chr14:103417272-103465706	0	+	103417272	103417272	8553170	7	51,54,49,66,71,57,150,	0,11114,31646,34645,39869,45132,48284,
#Partially deleted in new
chr14	103417327	103465616	chr14:103417327-103465616	0	+	103417327	103417327	8553170	8	134,54,49,66,71,69,57,60,	0,11059,31591,34590,39814,41399,45077,48229,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	103429192	103465730	chr14:103429192-103465730	0	+	103429192	103429192	8553170	6	181,49,66,71,57,174,	0,19726,22725,27949,33212,36364,
#Partially deleted in new
chr14	103465713	103503281	chr14:103465713-103503281	0	+	103465713	103503227	789624	11	80,120,100,113,106,218,104,258,27,45,400,	0,258,629,1365,2367,9279,14673,26063,32788,34442,37168,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	103466052	103469303	chr14:103466052-103469303	0	+	103466052	103466052	8553170	5	39,100,113,154,101,	0,290,1026,1980,3150,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	103466362	103467685	chr14:103466362-103467685	0	+	103466362	103466362	8553170	2	80,607,	0,716,
#Partially deleted in new
chr14	103467713	103492034	chr14:103467713-103492034	0	+	103467713	103467713	8553170	4	473,218,104,258,	0,7279,12673,24063,
#Partially deleted in new
chr14	103474991	103503282	chr14:103474991-103503282	0	+	103474991	103503227	789624	3	219,104,401,	0,5395,27890,
#Partially deleted in new
chr14	103475123	103503282	chr14:103475123-103503282	0	+	103475123	103503227	789624	6	87,104,156,258,45,401,	0,5263,15828,16653,25032,27758,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	103489396	103503827	chr14:103489396-103503827	0	+	103489396	103489396	8553170	2	2638,946,	0,13485,
#Partially deleted in new
chr14	103491538	103503071	chr14:103491538-103503071	0	+	103491538	103491538	8553170	4	496,27,45,190,	0,6963,8617,11343,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	103498864	103503827	chr14:103498864-103503827	0	+	103498864	103498864	8553170	2	1336,946,	0,4017,
#Deleted in new
chr14	103519658	103523111	chr14:103519658-103523111	3	-	103519863	103522493	0	8	384,190,124,172,133,155,205,346,	0,463,810,1604,2159,2364,2642,3107,
#Deleted in new
chr14	103519667	103521322	chr14:103519667-103521322	0	-	103520310	103521322	789624	3	375,190,60,	0,454,1595,
#Deleted in new
chr14	103519678	103521443	chr14:103519678-103521443	0	-	103519678	103519678	8553170	3	364,190,181,	0,443,1584,
#Deleted in new
chr14	103519694	103521770	chr14:103519694-103521770	0	-	103519694	103519694	8553170	4	348,190,124,508,	0,427,774,1568,
#Deleted in new
chr14	103519701	103522821	chr14:103519701-103522821	0	-	103522056	103522493	789624	8	341,190,124,172,133,155,68,56,	0,420,767,1561,2116,2321,2736,3064,
#Deleted in new
chr14	103519861	103521342	chr14:103519861-103521342	0	-	103519863	103521342	789624	4	181,190,91,80,	0,260,640,1401,
#Deleted in new
chr14	103519991	103521101	chr14:103519991-103521101	0	-	103519991	103521101	789624	3	51,190,29,	0,130,1081,
#Deleted in new
chr14	103520152	103520728	chr14:103520152-103520728	0	-	103520152	103520152	8553170	2	159,260,	0,316,
#Deleted in new
chr14	103521236	103522198	chr14:103521236-103522198	0	-	103521236	103521236	8553170	2	198,381,	0,581,
#Deleted in new
chr14	103521261	103522802	chr14:103521261-103522802	0	-	103521261	103521261	8553170	4	173,360,205,37,	0,556,1039,1504,
#Deleted in new
chr14	103521262	103522696	chr14:103521262-103522696	0	-	103521262	103522493	789624	4	172,133,155,396,	0,555,760,1038,
#Deleted in new
chr14	103521282	103522302	chr14:103521282-103522302	0	-	103521282	103521282	8553170	3	152,133,280,	0,535,740,
#Deleted in new
chr14	103521620	103522830	chr14:103521620-103522830	0	-	103521620	103521620	8553170	4	330,155,205,65,	0,402,680,1145,
#Deleted in new
chr14	103521647	103522833	chr14:103521647-103522833	0	-	103521647	103521647	8553170	3	530,205,68,	0,653,1118,
#Deleted in new
chr14	103521682	103522830	chr14:103521682-103522830	0	-	103521682	103521682	8553170	3	268,483,65,	0,340,1083,
#Deleted in new
chr14	103521826	103522833	chr14:103521826-103522833	0	-	103521826	103522406	789624	4	124,155,176,68,	0,196,474,939,
#Deleted in new
chr14	103521827	103522696	chr14:103521827-103522696	0	-	103521827	103521827	8553170	2	350,396,	0,473,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	103525009	103529072	chr14:103525009-103529072	3	-	103525009	103525009	8553170	1	4063,	0,
#Deleted in new
chr14	103529183	103537073	chr14:103529183-103537073	3	+	103529978	103534821	0	4	78,360,267,2524,	0,766,3398,5366,
#Deleted in new
chr14	103529225	103537073	chr14:103529225-103537073	0	+	103529225	103534821	789624	3	36,267,2524,	0,3356,5324,
#Deleted in new
chr14	103550344	103550406	chr14:103550344-103550406	3	+	103550344	103550344	8553170	1	62,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	103553420	103561877	chr14:103553420-103561877	3	+	103553420	103553420	8553170	2	442,111,	0,8346,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	103556543	103562814	chr14:103556543-103562814	3	-	103559820	103561164	0	2	4649,199,	0,6072,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	103556544	103562318	chr14:103556544-103562318	1	-	103559820	103561164	0	2	4648,219,	0,5555,
#Partially deleted in new
chr14	103559618	103562298	chr14:103559618-103562298	1	-	103559820	103562007	0	2	1574,386,	0,2294,
#Partially deleted in new
chr14	103560530	103562831	chr14:103560530-103562831	0	-	103560530	103561164	789624	2	662,216,	0,2085,
#Partially deleted in new
chr14	103561895	103657734	chr14:103561895-103657734	0	+	103654564	103657734	789624	3	89,262,189,	0,92668,95650,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	103562961	103592187	chr14:103562961-103592187	3	+	103562962	103590286	789624	5	163,198,64,91,2007,	0,8661,11145,24312,27219,
#Partially deleted in new
chr14	103562961	103685924	chr14:103562961-103685924	3	+	103562962	103685018	789624	18	163,198,64,91,262,231,79,226,88,102,174,100,50,68,109,162,51,287,	0,8661,11145,24312,91602,94584,99154,99740,106549,107220,110052,110370,112590,112727,114453,116422,122024,122676,
#Partially deleted in new
chr14	103562964	103590504	chr14:103562964-103590504	0	+	103562964	103590286	789624	3	160,91,324,	0,24309,27216,
#Partially deleted in new
chr14	103562978	103590527	chr14:103562978-103590527	0	+	103562978	103587291	789624	4	146,198,91,347,	0,8644,24295,27202,
#Partially deleted in new
chr14	103562981	103574212	chr14:103562981-103574212	0	+	103562981	103562981	8553170	3	143,198,106,	0,8641,11125,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	103562986	103590384	chr14:103562986-103590384	1	+	103563001	103587334	789624	6	138,198,64,88,91,204,	0,8636,11120,18582,24287,27194,
#Partially deleted in new
chr14	103563052	103590360	chr14:103563052-103590360	0	+	103563052	103563361	789624	6	72,165,198,64,91,180,	0,162,8570,11054,24221,27128,
#Partially deleted in new
chr14	103563076	103574732	chr14:103563076-103574732	0	+	103563076	103574406	789624	4	48,198,64,343,	0,8546,11030,11313,
#Partially deleted in new
chr14	103563170	103590389	chr14:103563170-103590389	1	+	103587302	103590286	789624	3	213,91,209,	0,24103,27010,
#Partially deleted in new
chr14	103563172	103590526	chr14:103563172-103590526	1	+	103587302	103590286	789624	5	207,198,64,91,346,	0,8450,10934,24101,27008,
#Partially deleted in new
chr14	103563189	103590440	chr14:103563189-103590440	1	+	103587302	103590286	789624	4	190,198,91,260,	0,8433,24084,26991,
#Partially deleted in new
chr14	103563290	103574732	chr14:103563290-103574732	0	+	103563290	103563290	8553170	4	89,198,64,343,	0,8332,10816,11099,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	103563306	103590525	chr14:103563306-103590525	1	+	103587302	103590299	789624	5	73,198,91,50,345,	0,8316,23967,24927,26874,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	103571667	103587364	chr14:103571667-103587364	0	+	103571667	103587334	789624	4	153,64,121,91,	0,2439,7703,15606,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	103571753	103590234	chr14:103571753-103590234	0	+	103571753	103579475	789624	4	67,121,91,54,	0,7617,15520,18427,
#Partially deleted in new
chr14	103571755	103607523	chr14:103571755-103607523	0	+	103571755	103571755	8553170	4	65,64,91,320,	0,2351,15518,35448,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	103588001	103590620	chr14:103588001-103590620	0	+	103588001	103588001	8553170	2	282,440,	0,2179,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr14	103629176	103714249	chr14:103629176-103714249	1	+	103654564	103700726	0	15	318,262,231,79,226,88,102,174,100,50,68,109,162,73,13049,	0,25387,28369,32939,33525,40334,41005,43837,44155,46375,46512,48238,50207,71478,72024,
#Partially deleted in new
chr14	103629202	103685316	chr14:103629202-103685316	1	+	103654564	103685018	789624	14	292,262,231,79,226,88,102,174,100,50,68,109,210,331,	0,25361,28343,32913,33499,40308,40979,43811,44129,46349,46486,48212,50106,55783,
#Partially deleted in new
chr14	103629210	103654838	chr14:103629210-103654838	0	+	103629210	103629210	8553170	2	284,275,	0,25353,
#Partially deleted in new
chr14	103629226	103686917	chr14:103629226-103686917	1	+	103654564	103685018	0	15	268,262,231,79,226,88,102,174,100,50,68,109,162,51,1280,	0,25337,28319,32889,33475,40284,40955,43787,44105,46325,46462,48188,50157,55759,56411,
#Partially deleted in new
chr14	103629236	103701544	chr14:103629236-103701544	1	+	103654564	103700726	0	17	258,262,231,79,226,88,102,174,100,50,68,109,162,131,67,73,344,	0,25327,28309,32879,33465,40274,40945,43777,44095,46315,46452,48178,50147,57844,63122,71418,71964,
#Partially deleted in new
chr14	103629236	103693743	chr14:103629236-103693743	3	+	103654564	103693618	0	16	258,262,231,79,226,88,102,174,100,50,68,109,135,131,67,191,	0,25327,28309,32879,33465,40274,40945,43777,44095,46315,46452,48178,50147,57844,63122,64316,
#Partially deleted in new
chr14	103629236	103686211	chr14:103629236-103686211	1	+	103654564	103685018	0	14	258,262,231,79,226,88,102,174,100,50,68,109,162,1226,	0,25327,28309,32879,33465,40274,40945,43777,44095,46315,46452,48178,50147,55749,
#Partially deleted in new
chr14	103629236	103701514	chr14:103629236-103701514	1	+	103654564	103700726	789624	17	258,262,231,79,226,88,102,174,100,50,68,109,135,131,67,73,314,	0,25327,28309,32879,33465,40274,40945,43777,44095,46315,46452,48178,50147,57844,63122,71418,71964,
#Partially deleted in new
chr14	103629236	103685916	chr14:103629236-103685916	1	+	103654564	103685643	789624	14	258,262,231,79,226,88,102,174,100,50,68,109,162,279,	0,25327,28309,32879,33465,40274,40945,43777,44095,46315,46452,48178,50147,56401,
#Partially deleted in new
chr14	103629240	103693743	chr14:103629240-103693743	1	+	103654564	103693618	0	16	254,262,231,79,226,88,102,174,100,50,68,109,162,131,67,191,	0,25323,28305,32875,33461,40270,40941,43773,44091,46311,46448,48174,50143,57840,63118,64312,
#Partially deleted in new
chr14	103629240	103701544	chr14:103629240-103701544	1	+	103654564	103701203	0	16	254,262,231,79,226,88,102,174,100,50,68,109,162,131,73,344,	0,25323,28305,32875,33461,40270,40941,43773,44091,46311,46448,48174,50143,57840,71414,71960,
#Partially deleted in new
chr14	103629240	103693953	chr14:103629240-103693953	0	+	103654564	103685018	0	17	254,262,231,79,226,88,102,174,100,50,68,109,162,51,131,67,401,	0,25323,28305,32875,33461,40270,40941,43773,44091,46311,46448,48174,50143,55745,57840,63118,64312,
#Partially deleted in new
chr14	103629240	103701544	chr14:103629240-103701544	1	+	103654564	103701203	789624	16	254,262,231,79,226,88,102,174,100,50,68,109,135,131,73,344,	0,25323,28305,32875,33461,40270,40941,43773,44091,46311,46448,48174,50143,57840,71414,71960,
#Partially deleted in new
chr14	103629240	103701514	chr14:103629240-103701514	1	+	103654564	103700726	0	15	254,262,231,79,226,88,102,174,100,50,68,109,135,73,314,	0,25323,28305,32875,33461,40270,40941,43773,44091,46311,46448,48174,50143,71414,71960,
#Partially deleted in new
chr14	103629240	103693837	chr14:103629240-103693837	1	+	103654564	103693618	0	15	254,262,231,79,226,88,102,174,100,50,68,109,135,66,285,	0,25323,28305,32875,33461,40270,40941,43773,44091,46311,46448,48174,50143,63119,64312,
#Partially deleted in new
chr14	103629296	103686186	chr14:103629296-103686186	1	+	103654564	103685018	789624	15	198,262,231,79,220,88,102,174,100,50,68,109,135,51,549,	0,25267,28249,32819,33405,40214,40885,43717,44035,46255,46392,48118,50087,55689,56341,
#Partially deleted in new
chr14	103673354	103693688	chr14:103673354-103693688	0	+	103673354	103693618	789624	8	77,50,68,109,237,131,67,136,	0,2197,2334,4060,5954,13726,19004,20198,
#Partially deleted in new
chr14	103675551	103686200	chr14:103675551-103686200	0	+	103675551	103685018	789624	6	50,68,109,135,51,563,	0,137,1863,3832,9434,10086,
#Partially deleted in new
chr14	103675563	103679798	chr14:103675563-103679798	0	+	103675563	103679653	789624	4	38,68,109,415,	0,125,1851,3820,
#Partially deleted in new
chr14	103675569	103685702	chr14:103675569-103685702	0	+	103675569	103685018	789624	6	32,68,109,210,51,65,	0,119,1845,3739,9416,10068,
#Partially deleted in new
chr14	103679397	103694047	chr14:103679397-103694047	0	+	103679397	103692391	789624	3	148,67,495,	0,12961,14155,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	103682361	103684015	chr14:103682361-103684015	3	-	103682361	103682361	8553170	2	246,1158,	0,496,
#Deleted in new
chr14	103684776	103685896	chr14:103684776-103685896	0	+	103684776	103684776	8553170	2	260,259,	0,861,
#Partially deleted in new
chr14	103686806	103701544	chr14:103686806-103701544	0	+	103686806	103686806	8553170	3	405,73,344,	0,13848,14394,
#Partially deleted in new
chr14	103686862	103693837	chr14:103686862-103693837	0	+	103686862	103686862	8553170	3	349,67,285,	0,5496,6690,
#Deleted in new
chr14	103687575	103688127	chr14:103687575-103688127	3	+	103687575	103687575	8553170	1	552,	0,
#Partially deleted in new
chr14	103692358	103701513	chr14:103692358-103701513	0	+	103692358	103693618	789624	4	67,82,73,313,	0,1194,8296,8842,
#Deleted in new
chr14	103694515	103695050	chr14:103694515-103695050	3	-	103694515	103694515	8553170	1	535,	0,
#Deleted in new
chr14	103694559	103695170	chr14:103694559-103695170	3	+	103694559	103694559	8553170	1	611,	0,
#Deleted in new
chr14	103696352	103697163	chr14:103696352-103697163	3	+	103696352	103696352	8553170	1	811,	0,
#Partially deleted in new
chr14	103697608	103715443	chr14:103697608-103715443	1	-	103698797	103711087	789624	10	1409,47,213,155,213,138,148,102,94,20,	0,1524,1755,5564,9394,10913,13424,13857,15266,17815,
#Partially deleted in new
chr14	103697616	103715504	chr14:103697616-103715504	3	-	103698797	103711087	789624	9	1401,47,213,155,213,138,213,102,81,	0,1516,1747,5556,9386,10905,13416,13849,17807,
#Partially deleted in new
chr14	103697617	103712104	chr14:103697617-103712104	1	-	103698797	103711087	789624	8	1400,47,213,155,213,138,213,639,	0,1515,1746,5555,9385,10904,13415,13848,
#Partially deleted in new
chr14	103697617	103708855	chr14:103697617-103708855	0	-	103697617	103697617	8553170	5	1400,47,213,155,1853,	0,1515,1746,5555,9385,
#Partially deleted in new
chr14	103697617	103715469	chr14:103697617-103715469	1	-	103698797	103711087	789624	10	1400,47,213,155,213,138,213,102,57,46,	0,1515,1746,5555,9385,10904,13415,13848,15257,17806,
#Partially deleted in new
chr14	103698738	103715459	chr14:103698738-103715459	1	-	103698797	103699522	789624	4	279,47,213,36,	0,394,625,16685,
#Partially deleted in new
chr14	103698942	103703347	chr14:103698942-103703347	0	-	103698942	103698942	8553170	4	75,47,213,175,	0,190,421,4230,
#Deleted in new
chr14	103699921	103701544	chr14:103699921-103701544	0	+	103699921	103699921	8553170	2	806,344,	0,1279,
#Partially deleted in new
chr14	103700452	103703327	chr14:103700452-103703327	0	-	103700452	103700452	8553170	2	254,155,	0,2720,
#Partially deleted in new
chr14	103702015	103703237	chr14:103702015-103703237	0	-	103702015	103702015	8553170	2	567,65,	0,1157,
#Partially deleted in new
chr14	103703277	103708826	chr14:103703277-103708826	0	-	103703277	103703277	8553170	3	50,213,305,	0,3725,5244,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	103704395	103715483	chr14:103704395-103715483	0	-	103706328	103711087	789624	8	1647,169,213,138,213,102,57,60,	0,1811,2607,4126,6637,7070,8479,11028,
#Partially deleted in new
chr14	103706331	103715459	chr14:103706331-103715459	0	-	103706331	103711087	789624	6	44,213,138,213,102,36,	0,671,2190,4701,5134,9092,
#Partially deleted in new
chr14	103707070	103714250	chr14:103707070-103714250	0	-	103707070	103711087	789624	6	145,138,213,102,57,146,	0,1451,3962,4395,5804,7034,
#Partially deleted in new
chr14	103707102	103715484	chr14:103707102-103715484	0	-	103707102	103711087	789624	5	113,138,148,102,61,	0,1419,3930,4363,8321,
#Partially deleted in new
chr14	103708428	103715459	chr14:103708428-103715459	0	-	103708428	103708428	8553170	4	231,213,102,36,	0,2604,3037,6995,
#Partially deleted in new
chr14	103708529	103715484	chr14:103708529-103715484	0	-	103708529	103711087	789624	4	130,148,196,61,	0,2503,2936,6894,
#Partially deleted in new
chr14	103708571	103715486	chr14:103708571-103715486	0	-	103708571	103711087	789624	4	88,213,196,63,	0,2461,2894,6852,
#Partially deleted in new
chr14	103708578	103714213	chr14:103708578-103714213	0	-	103708578	103711087	789624	5	81,213,102,67,109,	0,2454,2887,4296,5526,
#Partially deleted in new
chr14	103715729	103733668	chr14:103715729-103733668	1	+	103715841	103733018	0	8	250,51,169,76,92,54,143,686,	0,11062,12016,13178,13361,14063,16890,17253,
#Partially deleted in new
chr14	103715807	103733662	chr14:103715807-103733662	3	+	103715841	103733018	0	7	172,51,169,76,92,143,680,	0,10984,11938,13100,13283,16812,17175,
#Partially deleted in new
chr14	103715807	103728092	chr14:103715807-103728092	0	+	103715807	103715807	8553170	3	172,51,347,	0,10984,11938,
#Partially deleted in new
chr14	103715826	103728983	chr14:103715826-103728983	0	+	103715841	103727651	789624	4	153,51,356,76,	0,10965,11732,13081,
#Partially deleted in new
chr14	103715830	103729211	chr14:103715830-103729211	0	+	103715830	103715830	8553170	5	149,51,169,76,121,	0,10961,11915,13077,13260,
#Partially deleted in new
chr14	103715838	103729847	chr14:103715838-103729847	0	+	103715841	103728958	789624	4	141,76,92,55,	0,13069,13252,13954,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	103724508	103733664	chr14:103724508-103733664	0	+	103724508	103724508	8553170	6	3406,76,92,54,143,682,	0,4399,4582,5284,8111,8474,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	103725727	103725825	chr14:103725727-103725825	3	-	103725727	103725727	8553170	1	98,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	103727453	103731445	chr14:103727453-103731445	0	+	103727453	103727453	8553170	2	461,2355,	0,1637,
#Deleted in new
chr14	103727897	103730037	chr14:103727897-103730037	0	+	103727897	103729953	789624	4	17,76,92,245,	0,1010,1193,1895,
#Deleted in new
chr14	103728785	103729394	chr14:103728785-103729394	0	+	103728785	103728785	8553170	2	198,304,	0,305,
#Deleted in new
chr14	103729489	103730031	chr14:103729489-103730031	0	+	103729489	103729489	8553170	1	542,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	103731430	103733663	chr14:103731430-103733663	0	+	103731430	103731430	8553170	2	1332,681,	0,1552,
#Partially deleted in new
chr14	103733194	103797488	chr14:103733194-103797488	0	-	103735153	103797488	8553170	16	2001,200,167,134,138,770,502,170,181,141,197,169,102,77,120,118,	0,2808,4499,5484,5691,6629,8595,9459,13178,16599,19805,20875,24455,45550,51600,64176,
#Partially deleted in new
chr14	103733751	103847590	chr14:103733751-103847590	3	-	103735153	103847307	789624	17	1444,200,167,134,138,770,502,170,181,141,197,175,102,77,120,148,292,	0,2251,3942,4927,5134,6072,8038,8902,12621,16042,19248,20318,23898,44993,51043,63619,113547,
#Partially deleted in new
chr14	103733751	103737816	chr14:103733751-103737816	0	-	103734546	103737816	789624	4	171,297,80,123,	0,615,1248,3942,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	103733752	103737696	chr14:103733752-103737696	0	-	103733752	103733752	8553170	2	1443,1694,	0,2250,
#Partially deleted in new
chr14	103733752	103746488	chr14:103733752-103746488	0	-	103736126	103746488	789624	8	1443,200,134,138,770,502,170,116,	0,2250,4926,5133,6071,8037,8901,12620,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr14	103734891	103846885	chr14:103734891-103846885	0	-	103764461	103846780	789624	18	304,200,167,134,138,770,502,170,181,141,197,175,102,617,77,120,148,111,	0,1111,2802,3787,3994,4932,6898,7762,11481,14902,18108,19178,22758,28971,43853,49903,62479,111883,
#Partially deleted in new
chr14	103734892	103744015	chr14:103734892-103744015	0	-	103734892	103734892	8553170	9	303,200,167,134,138,770,502,170,125,	0,1110,2801,3786,3993,4931,6897,7761,8998,
#Partially deleted in new
chr14	103735113	103739272	chr14:103735113-103739272	0	-	103735113	103735113	8553170	5	82,200,167,134,387,	0,889,2580,3565,3772,
#Deleted in new
chr14	103738388	103739256	chr14:103738388-103739256	0	-	103738388	103738388	8553170	2	424,371,	0,497,
#Partially deleted in new
chr14	103738678	103847575	chr14:103738678-103847575	0	-	103738678	103738678	8553170	4	134,138,240,34,	0,207,1145,108863,
#Partially deleted in new
chr14	103741991	103747397	chr14:103741991-103747397	0	-	103741991	103741991	8553170	3	300,181,465,	0,4381,4941,
#Deleted in new
chr14	103742088	103742898	chr14:103742088-103742898	0	-	103742088	103742088	8553170	2	203,245,	0,565,
#Deleted in new
chr14	103746373	103747384	chr14:103746373-103747384	0	-	103746373	103746373	8553170	3	180,121,452,	0,278,559,
#Deleted in new
chr14	103746707	103747356	chr14:103746707-103747356	0	-	103746707	103746707	8553170	2	153,424,	0,225,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	103754164	103840107	chr14:103754164-103840107	0	-	103754164	103754164	8553170	6	80,102,115,77,148,29,	0,3485,5026,24580,43206,85914,
#Partially deleted in new
chr14	103757648	103847063	chr14:103757648-103847063	0	-	103757648	103797518	789624	5	103,77,120,148,56,	0,21096,27146,39722,89359,
#Partially deleted in new
chr14	103762802	103763147	chr14:103762802-103763147	7	+	103762802	103762802	16724991	1	345,	0,
#Partially deleted in new
chr14	103762998	103763277	chr14:103762998-103763277	5	+	103762998	103762998	16724991	1	279,	0,
#Partially deleted in new
chr14	103778591	103847562	chr14:103778591-103847562	0	-	103778591	103778591	8553170	4	230,120,148,264,	0,6203,18779,68707,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	103778754	103847487	chr14:103778754-103847487	0	-	103778754	103847307	789624	5	67,120,87,148,189,	0,6040,15822,18616,68544,
#Deleted in new
chr14	103797271	103797348	chr14:103797271-103797348	3	-	103797271	103797271	8553170	1	77,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	103847720	103858049	chr14:103847720-103858049	3	+	103847720	103847720	789624	3	23,107,1926,	0,6575,8403,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	103854365	103880111	chr14:103854365-103880111	3	-	103854365	103854365	8553170	4	179,142,113,148,	0,15505,24978,25598,
#Partially deleted in new
chr14	103875054	103877478	chr14:103875054-103877478	3	+	103875054	103875054	8553170	2	43,84,	0,2340,
#Partially deleted in new
chr14	103912287	103921557	chr14:103912287-103921557	1	-	103912665	103915189	789624	4	407,24,124,88,	0,1673,2778,9182,
#Partially deleted in new
chr14	103912289	103928269	chr14:103912289-103928269	3	-	103912665	103915189	789624	4	405,24,124,154,	0,1671,2776,15826,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	103912299	103921520	chr14:103912299-103921520	1	-	103913963	103915189	789624	5	395,24,155,124,51,	0,1661,2179,2766,9170,
#Partially deleted in new
chr14	103912301	103921501	chr14:103912301-103921501	1	-	103912665	103920990	789624	5	393,24,124,269,32,	0,1659,2764,8638,9168,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	103912509	103921529	chr14:103912509-103921529	1	-	103913874	103915189	789624	3	1475,124,60,	0,2556,8960,
#Partially deleted in new
chr14	103912515	103914142	chr14:103912515-103914142	0	-	103912515	103912515	8553170	2	179,182,	0,1445,
#Partially deleted in new
chr14	103912515	103921494	chr14:103912515-103921494	1	-	103912665	103915189	789624	5	179,24,124,120,25,	0,1445,2550,5489,8954,
#Partially deleted in new
chr14	103912516	103921538	chr14:103912516-103921538	0	-	103912516	103912516	8553170	3	178,24,69,	0,1444,8953,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	103913218	103921511	chr14:103913218-103921511	0	-	103913218	103913218	8553170	3	766,124,42,	0,1847,8251,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	103913256	103921520	chr14:103913256-103921520	1	-	103913963	103915189	789624	4	728,155,124,51,	0,1222,1809,8213,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	103913957	103921525	chr14:103913957-103921525	0	-	103913957	103913957	8553170	3	676,124,56,	0,1108,7512,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	103914760	103921566	chr14:103914760-103921566	0	-	103914760	103914760	8553170	2	429,97,	0,6709,
#Partially deleted in new
chr14	103928461	104052667	chr14:103928461-104052667	3	+	103928509	104052082	789624	36	263,107,98,222,123,81,165,104,65,55,85,58,105,98,132,166,64,64,45,54,117,108,101,174,112,213,90,261,156,71,110,97,139,119,73,687,	0,27202,34617,36871,38247,42079,46927,57755,62698,65870,66057,67288,70162,75776,76812,77927,78184,78320,78698,79951,86263,87519,89630,93695,96107,97102,97585,98217,102646,103555,105498,106498,111734,113607,121146,123519,
#Partially deleted in new
chr14	103928816	103965481	chr14:103928816-103965481	0	+	103928816	103928816	8553170	5	107,120,107,98,149,	0,16589,26847,34262,36516,
#Partially deleted in new
chr14	103940425	103942308	chr14:103940425-103942308	3	-	103940805	103941695	789624	3	678,306,217,	0,971,1666,
#Partially deleted in new
chr14	103940425	103942561	chr14:103940425-103942561	0	-	103940425	103940425	8553170	2	678,470,	0,1666,
#Partially deleted in new
chr14	103970596	104052665	chr14:103970596-104052665	0	+	103970596	104052082	789624	26	25,165,104,65,55,85,58,105,98,132,166,64,64,45,54,117,108,101,174,112,213,90,261,119,73,685,	0,4792,15620,20563,23735,23922,25153,28027,33641,34677,35792,36049,36185,36563,37816,44128,45384,47495,51560,53972,54967,55450,56082,71472,79011,81384,
#Partially deleted in new
chr14	103970606	104052212	chr14:103970606-104052212	1	+	103975397	104032068	789624	32	15,165,104,65,55,85,58,105,98,132,166,64,64,45,54,117,108,101,174,112,213,90,261,156,36,34,110,97,139,119,73,232,	0,4782,15610,20553,23725,23912,25143,28017,33631,34667,35782,36039,36175,36553,37806,44118,45374,47485,51550,53962,54957,55440,56072,60501,61410,61447,63353,64353,69589,71462,79001,81374,
#Deleted in new
chr14	104005155	104007180	chr14:104005155-104007180	0	+	104005155	104005155	8553170	5	250,166,64,64,21,	0,1233,1490,1626,2004,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	104013641	104013933	chr14:104013641-104013933	3	+	104013641	104013641	8553170	1	292,	0,
#Deleted in new
chr14	104049417	104052665	chr14:104049417-104052665	0	+	104049417	104049417	8553170	2	263,685,	0,2563,
#Deleted in new
chr14	104049424	104052281	chr14:104049424-104052281	0	+	104049424	104049424	8553170	3	256,73,301,	0,440,2556,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr14	104085678	104115581	chr14:104085678-104115581	3	+	104085770	104112544	789624	16	174,109,112,126,84,127,113,183,114,123,96,164,87,100,81,3058,	0,6954,7812,9852,11875,13174,17884,18625,18943,19649,21120,21503,23550,25823,26241,26845,
#Partially deleted in new
chr14	104085685	104107235	chr14:104085685-104107235	0	+	104085685	104085685	8553170	11	167,970,126,84,127,113,183,114,123,96,54,	0,6947,9845,11868,13167,17877,18618,18936,19642,21113,21496,
#Partially deleted in new
chr14	104085690	104112633	chr14:104085690-104112633	1	+	104085770	104112590	789624	15	162,109,112,126,84,127,113,183,114,123,96,164,87,81,110,	0,6942,7800,9840,11863,13162,17872,18613,18931,19637,21108,21491,23538,26229,26833,
#Deleted in new
chr14	104093490	104105382	chr14:104093490-104105382	0	+	104093490	104105382	789624	4	112,126,84,55,	0,2040,4063,11837,
#Deleted in new
chr14	104104928	104107233	chr14:104104928-104107233	0	+	104104928	104104928	8553170	4	116,123,96,52,	0,399,1870,2253,
#Deleted in new
chr14	104104961	104107219	chr14:104104961-104107219	0	+	104104961	104104961	8553170	3	83,123,38,	0,366,2220,
#Deleted in new
chr14	104104982	104105344	chr14:104104982-104105344	0	+	104104982	104104982	8553170	2	154,17,	0,345,
#Deleted in new
chr14	104107229	104112588	chr14:104107229-104112588	0	+	104107229	104112544	789624	5	116,87,100,81,83,	0,1999,4272,4690,5276,
#Deleted in new
chr14	104111620	104112708	chr14:104111620-104112708	0	+	104111620	104111620	8553170	2	380,185,	0,903,
#Deleted in new
chr14	104117404	104117514	chr14:104117404-104117514	3	+	104117404	104117404	5263520	1	110,	0,
#Deleted in new
chr14	104117417	104117503	chr14:104117417-104117503	3	-	104117417	104117417	5263520	1	86,	0,
#Deleted in new
chr14	104137149	104137898	chr14:104137149-104137898	3	-	104137149	104137149	8553170	2	93,369,	0,380,
#Partially deleted in new
chr14	104138722	104179790	chr14:104138722-104179790	3	+	104138722	104179790	789624	15	42,246,447,188,190,213,94,263,184,163,163,2917,206,151,182,	0,320,13292,19032,28136,33000,33852,34254,34607,34983,35425,36259,39827,40513,40886,
#Partially deleted in new
chr14	104139039	104180894	chr14:104139039-104180894	1	+	104152143	104179790	789624	14	249,447,188,190,213,94,263,184,163,163,2917,206,151,1286,	0,12975,18715,27819,32683,33535,33937,34290,34666,35108,35942,39510,40196,40569,
#Partially deleted in new
chr14	104223583	104288069	chr14:104223583-104288069	3	+	104223583	104223583	789624	3	233,68,236,	0,63902,64250,
#Partially deleted in new
chr14	104223593	104275629	chr14:104223593-104275629	0	+	104223593	104223593	789624	2	223,286,	0,51750,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	104223613	104243747	chr14:104223613-104243747	1	+	104223613	104223613	8553170	2	203,651,	0,19483,
#Deleted in new
chr14	104376529	104378951	chr14:104376529-104378951	3	-	104376529	104376529	8553170	3	167,280,71,	0,1011,2351,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	104400942	104401048	chr14:104400942-104401048	3	-	104400942	104400942	8553170	1	106,	0,
#Partially deleted in new
chr14	104450978	104451433	chr14:104450978-104451433	7	+	104450978	104450978	16724991	1	455,	0,
#Partially deleted in new
chr14	104474677	104604759	chr14:104474677-104604759	0	-	104474677	104604741	789624	4	48,79,138,323,	0,120487,122312,129759,
#Partially deleted in new
chr14	104579683	104590515	chr14:104579683-104590515	3	+	104586430	104588783	789624	5	320,127,130,36,1938,	0,6731,8065,8590,8894,
#Partially deleted in new
chr14	104579763	104589543	chr14:104579763-104589543	1	+	104586430	104588878	789624	5	240,127,130,36,922,	0,6651,7985,8510,8858,
#Partially deleted in new
chr14	104581140	104589808	chr14:104581140-104589808	1	+	104586430	104588783	789624	5	485,127,130,36,1231,	0,5274,6608,7133,7437,
#Deleted in new
chr14	104589020	104589847	chr14:104589020-104589847	3	-	104589020	104589020	8553170	2	320,223,	0,604,
#Deleted in new
chr14	104590863	104593561	chr14:104590863-104593561	0	-	104591443	104593561	789624	2	586,229,	0,2469,
#Deleted in new
chr14	104590864	104592509	chr14:104590864-104592509	1	-	104591629	104592178	789624	1	1645,	0,
#Partially deleted in new
chr14	104592992	104604983	chr14:104592992-104604983	3	-	104593478	104604741	789624	4	666,79,138,547,	0,2172,3997,11444,
#Partially deleted in new
chr14	104594079	104605647	chr14:104594079-104605647	1	-	104595092	104604741	789624	3	1164,138,1211,	0,2910,10357,
#Partially deleted in new
chr14	104594281	104604741	chr14:104594281-104604741	1	-	104594281	104604741	789624	4	114,79,138,305,	0,883,2708,10155,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	104653547	104655567	chr14:104653547-104655567	1	-	104653547	104653547	8553170	2	410,93,	0,1927,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	104653598	104655787	chr14:104653598-104655787	3	-	104653598	104653598	8553170	2	173,313,	0,1876,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	104661119	104665558	chr14:104661119-104665558	3	-	104661119	104661119	789624	2	2990,826,	0,3613,
#Deleted in new
chr14	104677693	104677749	chr14:104677693-104677749	3	-	104677693	104677693	5263520	1	56,	0,
#Partially deleted in new
chr14	104681145	104684932	chr14:104681145-104684932	3	+	104681145	104681145	8553170	2	437,870,	0,2917,
#Partially deleted in new
chr14	104689605	104722535	chr14:104689605-104722535	1	+	104701365	104718823	789624	22	134,400,116,160,34,142,142,750,152,62,103,86,101,71,108,71,121,165,103,162,654,3741,	0,11751,13499,13689,14310,16429,17304,17647,18830,19065,19675,20014,20482,21331,21473,22023,22827,23222,23601,23839,24597,29189,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	104689620	104704809	chr14:104689620-104704809	1	+	104701365	104703953	789624	5	119,400,116,160,894,	0,11736,13484,13674,14295,
#Partially deleted in new
chr14	104689636	104719603	chr14:104689636-104719603	3	+	104701365	104715339	789624	23	103,400,116,160,34,142,142,750,152,62,103,86,101,71,108,71,121,165,103,162,654,57,809,	0,11720,13468,13658,14279,16398,17273,17616,18799,19034,19644,19983,20451,21300,21442,21992,22796,23191,23570,23808,24566,25647,29158,
#Deleted in new
chr14	104690090	104691284	chr14:104690090-104691284	3	-	104690090	104690090	8553170	2	649,67,	0,1127,
#Partially deleted in new
chr14	104707863	104719605	chr14:104707863-104719605	0	+	104707863	104715339	789624	17	139,152,62,103,86,101,71,108,71,121,165,103,162,654,57,84,811,	0,572,807,1417,1756,2224,3073,3215,3765,4569,4964,5343,5581,6339,7420,9699,10931,
#Partially deleted in new
chr14	104707863	104719605	chr14:104707863-104719605	1	+	104719176	104719605	789624	15	139,152,62,103,86,106,164,71,121,165,103,162,654,57,811,	0,572,807,1417,1756,2224,3159,3765,4569,4964,5343,5581,6339,7420,10931,
#Deleted in new
chr14	104708290	104711664	chr14:104708290-104711664	0	+	104708290	104708290	8553170	7	442,103,86,101,71,108,36,	0,990,1329,1797,2646,2788,3338,
#Deleted in new
chr14	104710724	104712933	chr14:104710724-104712933	0	+	104710724	104710724	8553170	4	283,71,121,106,	0,904,1708,2103,
#Deleted in new
chr14	104712712	104713606	chr14:104712712-104713606	0	+	104712712	104712712	8553170	3	280,103,162,	0,494,732,
#Partially deleted in new
chr14	104715724	104719603	chr14:104715724-104719603	0	+	104715724	104715724	8553170	2	293,809,	0,3070,
#Partially deleted in new
chr14	104724185	104747310	chr14:104724185-104747310	3	+	104724270	104747003	0	13	277,103,63,51,67,108,82,127,155,125,98,150,360,	0,10834,14190,15142,15564,16415,16653,16931,17662,18881,20626,22050,22765,
#Partially deleted in new
chr14	104729733	104747310	chr14:104729733-104747310	1	+	104729892	104747003	0	13	480,103,63,51,67,108,82,127,155,125,98,150,360,	0,5286,8642,9594,10016,10867,11105,11383,12114,13333,15078,16502,17217,
#Partially deleted in new
chr14	104729733	104742001	chr14:104729733-104742001	0	+	104729733	104740605	789624	9	162,103,63,51,162,108,82,127,154,	0,5286,8642,9594,9921,10867,11105,11383,12114,
#Partially deleted in new
chr14	104729892	104747308	chr14:104729892-104747308	0	+	104729892	104740693	789624	13	321,103,63,51,50,108,82,127,155,125,98,150,358,	0,5127,8483,9435,9874,10708,10946,11224,11955,13174,14919,16343,17058,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	104737142	104747308	chr14:104737142-104747308	0	+	104737142	104737142	8553170	11	1296,51,50,108,82,127,155,125,98,150,358,	0,2185,2624,3458,3696,3974,4705,5924,7669,9093,9808,
#Deleted in new
chr14	104741919	104743550	chr14:104741919-104743550	0	+	104741919	104741919	8553170	2	83,484,	0,1147,
#Partially deleted in new
chr14	104741942	104744963	chr14:104741942-104744963	0	+	104741942	104741942	8553170	3	60,125,152,	0,1124,2869,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	104744343	104747325	chr14:104744343-104747325	0	+	104744343	104744343	8553170	3	566,150,375,	0,1892,2607,
#Deleted in new
chr14	104744718	104747308	chr14:104744718-104747308	0	+	104744718	104744718	8553170	2	1667,358,	0,2232,
#Deleted in new
chr14	104744799	104747308	chr14:104744799-104747308	0	+	104744799	104744799	8553170	3	110,150,358,	0,1436,2151,
#Deleted in new
chr14	104745992	104747310	chr14:104745992-104747310	1	+	104746246	104747003	789624	3	142,150,360,	0,243,958,
#Deleted in new
chr14	104746055	104747107	chr14:104746055-104747107	1	+	104746246	104747003	789624	2	330,190,	0,862,
#Partially deleted in new
chr14	104753099	104759657	chr14:104753099-104759657	3	+	104753201	104759485	789624	4	220,195,157,230,	0,2530,3504,6328,
#Partially deleted in new
chr14	104753146	104757479	chr14:104753146-104757479	1	+	104753201	104756764	789624	3	173,195,876,	0,2483,3457,
#Partially deleted in new
chr14	104753158	104759659	chr14:104753158-104759659	1	+	104753201	104759485	789624	3	161,157,232,	0,3445,6269,
#Partially deleted in new
chr14	104753159	104757312	chr14:104753159-104757312	0	+	104753201	104757312	789624	4	160,195,157,38,	0,2470,3444,4115,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	104753170	104768494	chr14:104753170-104768494	0	+	104753201	104766829	789624	6	149,195,157,108,144,103,	0,2459,3433,13619,14693,15221,
#Partially deleted in new
chr14	104753180	104756925	chr14:104753180-104756925	0	+	104753180	104753180	8553170	2	139,322,	0,3423,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	104753201	104759653	chr14:104753201-104759653	0	+	104753201	104753201	8553170	2	118,4024,	0,2428,
#Partially deleted in new
chr14	104753717	104759578	chr14:104753717-104759578	1	+	104755766	104759485	789624	4	171,195,157,151,	0,1912,2886,5710,
#Partially deleted in new
chr14	104769348	104795751	chr14:104769348-104795751	3	-	104770340	104792643	0	15	1072,103,88,215,129,126,69,66,132,148,112,129,125,84,268,	0,1396,3016,3529,3902,4106,4563,5589,5727,6303,7310,10739,23249,23778,26135,
#Partially deleted in new
chr14	104769348	104795679	chr14:104769348-104795679	1	-	104770340	104792643	0	14	1072,103,88,215,129,126,69,66,132,148,112,129,125,196,	0,1396,3016,3529,3902,4106,4563,5589,5727,6303,7310,10739,23249,26135,
#Partially deleted in new
chr14	104769348	104794124	chr14:104769348-104794124	1	-	104770340	104792643	0	13	1072,103,88,215,129,126,69,66,132,148,112,129,1527,	0,1396,3016,3529,3902,4106,4563,5589,5727,6303,7310,10739,23249,
#Deleted in new
chr14	104769348	104770271	chr14:104769348-104770271	3	+	104769348	104769348	8553170	2	38,625,	0,298,
#Partially deleted in new
chr14	104769351	104794528	chr14:104769351-104794528	1	-	104770340	104792643	0	14	1069,103,88,215,129,126,69,66,132,148,112,129,125,1402,	0,1393,3013,3526,3899,4103,4560,5586,5724,6300,7307,10736,23246,23775,
#Deleted in new
chr14	104769351	104774680	chr14:104769351-104774680	0	-	104769351	104769351	8553170	6	1069,103,88,215,129,1226,	0,1393,3013,3526,3899,4103,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	104769351	104778571	chr14:104769351-104778571	0	-	104769351	104769351	8553170	4	1069,1708,502,5117,	0,1393,3526,4103,
#Deleted in new
chr14	104769351	104772963	chr14:104769351-104772963	0	-	104769351	104769351	8553170	2	3101,86,	0,3526,
#Partially deleted in new
chr14	104769370	104793700	chr14:104769370-104793700	1	-	104770340	104792643	0	14	1050,103,88,215,129,126,69,66,132,148,112,129,125,574,	0,1374,2994,3507,3880,4084,4541,5567,5705,6281,7288,10717,23227,23756,
#Partially deleted in new
chr14	104769370	104795555	chr14:104769370-104795555	1	-	104770340	104792643	789624	15	1050,103,88,215,129,126,69,66,132,148,112,129,125,178,72,	0,1374,2994,3507,3880,4084,4541,5567,5705,6281,7288,10717,23227,23756,26113,
#Deleted in new
chr14	104769391	104773314	chr14:104769391-104773314	0	-	104769585	104773314	789624	5	235,103,88,215,64,	0,1353,2973,3486,3859,
#Deleted in new
chr14	104769971	104773491	chr14:104769971-104773491	0	-	104770340	104773491	789624	6	449,103,88,116,129,37,	0,773,2393,2906,3279,3483,
#Partially deleted in new
chr14	104770154	104777678	chr14:104770154-104777678	0	-	104770154	104770154	8553170	12	266,103,88,215,129,126,69,66,132,148,112,110,	0,590,2210,2723,3096,3300,3757,4783,4921,5497,6504,7414,
#Deleted in new
chr14	104770192	104773379	chr14:104770192-104773379	0	-	104771807	104773379	789624	6	228,103,95,88,215,129,	0,552,1529,2172,2685,3058,
#Partially deleted in new
chr14	104770340	104794191	chr14:104770340-104794191	1	-	104770340	104792643	0	14	80,103,88,215,129,126,69,66,132,148,112,129,125,73,	0,404,2024,2537,2910,3114,3571,4597,4735,5311,6318,9747,22257,23778,
#Partially deleted in new
chr14	104773790	104776694	chr14:104773790-104776694	0	-	104773790	104773790	8553170	5	190,66,132,148,36,	0,1147,1285,1861,2868,
#Deleted in new
chr14	104774696	104775360	chr14:104774696-104775360	0	-	104774696	104774696	8553170	2	307,285,	0,379,
#Partially deleted in new
chr14	104775139	104786367	chr14:104775139-104786367	0	-	104775139	104775139	8553170	5	68,148,112,129,77,	0,512,1519,4948,11151,
#Deleted in new
chr14	104776670	104795504	chr14:104776670-104795504	0	-	104776670	104792643	789624	5	100,129,125,178,21,	0,3417,15927,16456,18813,
#Deleted in new
chr14	104793156	104795743	chr14:104793156-104795743	0	-	104793156	104793156	8553170	2	148,260,	0,2327,
#Deleted in new
chr14	104793512	104795044	chr14:104793512-104795044	0	-	104793512	104793512	8553170	2	749,34,	0,1498,
#Deleted in new
chr14	104800595	104802486	chr14:104800595-104802486	1	+	104801197	104802466	789624	2	105,1306,	0,585,
#Deleted in new
chr14	104800912	104804712	chr14:104800912-104804712	3	+	104801197	104802466	789624	1	3800,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	104815448	104815753	chr14:104815448-104815753	3	-	104815448	104815448	8553170	1	305,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	104821200	104823718	chr14:104821200-104823718	3	+	104821200	104821200	789624	1	2518,	0,
#Partially deleted in new
chr14	104830837	104831171	chr14:104830837-104831171	7	-	104830837	104830837	16724991	1	334,	0,
#Deleted in new
chr14	104835996	104836852	chr14:104835996-104836852	7	-	104835996	104835996	16724991	1	856,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	104842662	104845916	chr14:104842662-104845916	3	+	104842662	104842662	8553170	1	3254,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	104857791	104858836	chr14:104857791-104858836	3	-	104857791	104857791	8553170	1	1045,	0,
#Partially deleted in new
chr14	104865279	104896742	chr14:104865279-104896742	1	+	104877899	104894958	789624	18	234,90,79,59,139,105,474,719,174,91,1704,244,160,144,89,94,52,2032,	0,10976,12605,13163,15007,17448,17755,18551,20089,20760,20995,24235,27696,28243,28481,29005,29257,29431,
#Partially deleted in new
chr14	104865312	104896770	chr14:104865312-104896770	1	+	104868450	104894958	789624	19	201,132,90,79,59,139,105,474,719,174,91,1704,139,160,144,89,94,52,2060,	0,3111,10943,12572,13130,14974,17415,17722,18518,20056,20727,20962,24307,27663,28210,28448,28972,29224,29398,
#Partially deleted in new
chr14	104865312	104896770	chr14:104865312-104896770	3	+	104868450	104894958	789624	19	201,132,90,81,57,139,105,477,719,174,91,1704,244,160,144,89,94,52,2060,	0,3111,10943,12572,13132,14974,17415,17719,18518,20056,20727,20962,24202,27663,28210,28448,28972,29224,29398,
#Deleted in new
chr14	104893933	104895059	chr14:104893933-104895059	0	+	104893933	104893933	8553170	3	445,52,349,	0,603,777,
#Deleted in new
chr14	104904341	104905204	chr14:104904341-104905204	3	+	104904341	104904341	8553170	3	257,259,68,	0,390,795,
#Partially deleted in new
chr14	104924712	104937761	chr14:104924712-104937761	1	+	104927140	104937212	8553170	11	278,90,194,184,121,128,201,140,166,97,596,	0,2428,2960,4036,4594,5265,6029,7035,7299,7546,12453,
#Partially deleted in new
chr14	104924815	104933237	chr14:104924815-104933237	1	+	104927119	104932964	789624	11	175,128,194,184,121,128,201,140,166,97,473,	0,2287,2857,3933,4491,5162,5926,6932,7196,7443,7949,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr14	104924822	104937790	chr14:104924822-104937790	3	+	104927140	104932964	789624	11	168,90,194,184,121,128,201,140,166,97,5026,	0,2318,2850,3926,4484,5155,5919,6925,7189,7436,7942,
#Partially deleted in new
chr14	104924878	104930801	chr14:104924878-104930801	0	+	104927140	104930801	789624	7	112,90,188,184,121,128,60,	0,2262,2800,3870,4428,5099,5863,
#Deleted in new
chr14	104924879	104929044	chr14:104924879-104929044	0	+	104924879	104924879	8553170	4	111,90,194,296,	0,2261,2793,3869,
#Deleted in new
chr14	104930620	104932177	chr14:104930620-104932177	0	+	104930620	104930620	8553170	3	322,140,166,	0,1127,1391,
#Deleted in new
chr14	104932159	104933235	chr14:104932159-104933235	1	+	104932327	104932964	789624	2	196,471,	0,605,
#Partially deleted in new
chr14	104937243	104970481	chr14:104937243-104970481	0	-	104937243	104937243	8553170	6	17898,151,102,99,59,26,	0,18239,19344,20166,20370,33212,
#Deleted in new
chr14	104937252	104953904	chr14:104937252-104953904	1	-	104938062	104940444	0	3	3307,105,24,	0,3621,16628,
#Partially deleted in new
chr14	104937316	104978357	chr14:104937316-104978357	3	-	104938062	104978237	0	7	17483,185,151,102,99,59,175,	0,17640,18166,19271,20093,20297,40866,
#Deleted in new
chr14	104953536	104955402	chr14:104953536-104955402	0	-	104953536	104953536	8553170	2	1263,446,	0,1420,
#Partially deleted in new
chr14	104985774	104994890	chr14:104985774-104994890	0	+	104985774	104994759	789624	5	104,146,130,117,293,	0,3168,5716,7173,8823,
#Partially deleted in new
chr14	104985788	104989712	chr14:104985788-104989712	0	+	104985788	104985788	8553170	3	90,146,81,	0,3154,3843,
#Partially deleted in new
chr14	104985792	104995512	chr14:104985792-104995512	3	+	104986431	104994759	789624	5	1062,146,130,117,915,	0,3150,5698,7155,8805,
#Partially deleted in new
chr14	104986278	104995514	chr14:104986278-104995514	0	+	104986431	104989656	789624	6	576,146,76,130,117,917,	0,2664,3353,5212,6669,8319,
#Partially deleted in new
chr14	104986335	104995344	chr14:104986335-104995344	0	+	104986431	104991493	789624	5	519,132,130,117,747,	0,2607,5155,6612,8262,
#Partially deleted in new
chr14	104986695	104999527	chr14:104986695-104999527	0	+	104986695	104986695	8553170	5	159,146,130,117,307,	0,2247,4795,6252,12525,
#Partially deleted in new
chr14	104988963	104995518	chr14:104988963-104995518	1	+	104992974	104994759	789624	4	744,130,117,921,	0,2527,3984,5634,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	104989839	104995202	chr14:104989839-104995202	1	+	104992974	104994759	789624	3	1781,117,605,	0,3108,4758,
#Partially deleted in new
chr14	104991521	105010482	chr14:104991521-105010482	0	+	104991521	104991521	8553170	3	99,117,249,	0,1426,18712,
#Partially deleted in new
chr14	105009572	105021148	chr14:105009572-105021148	3	-	105011203	105011929	789624	2	2363,150,	0,11426,
#Partially deleted in new
chr14	105009935	105021060	chr14:105009935-105021060	1	-	105011203	105011929	789624	3	698,776,62,	0,1224,11063,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	105049388	105065430	chr14:105049388-105065430	3	-	105050993	105055420	789624	4	2714,780,114,52,	0,5998,7778,15990,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	105049396	105065445	chr14:105049396-105065445	1	-	105050993	105057173	789624	3	2706,114,67,	0,7770,15982,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	105049399	105055791	chr14:105049399-105055791	0	-	105053992	105055420	789624	3	2703,233,405,	0,4533,5987,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	105050359	105065430	chr14:105050359-105065430	1	-	105050993	105055420	789624	5	1743,780,114,90,52,	0,5027,6807,7578,15019,
#Partially deleted in new
chr14	105051606	105065430	chr14:105051606-105065430	0	-	105051606	105051606	8553170	2	496,52,	0,13772,
#Deleted in new
chr14	105055390	105057482	chr14:105055390-105057482	0	-	105055390	105055420	789624	2	776,316,	0,1776,
#Partially deleted in new
chr14	105093608	105095699	chr14:105093608-105095699	0	+	105093608	105093608	8553170	2	212,160,	0,1931,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	105095190	105099004	chr14:105095190-105099004	3	+	105095190	105095190	8553170	3	578,101,286,	0,3282,3528,
#Deleted in new
chr14	105095324	105095767	chr14:105095324-105095767	0	+	105095324	105095324	8553170	2	118,228,	0,215,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	105110346	105110807	chr14:105110346-105110807	3	-	105110346	105110346	8553170	1	461,	0,
#Deleted in new
chr14	105112689	105112863	chr14:105112689-105112863	7	-	105112689	105112689	16724991	1	174,	0,
#Partially deleted in new
chr14	105140980	105168824	chr14:105140980-105168824	3	-	105142694	105168420	0	26	2190,157,132,243,116,114,86,28,117,114,114,114,153,151,174,47,114,114,114,120,131,61,252,58,351,470,	0,2501,3949,4750,5404,5630,6345,6519,6791,7135,7345,7764,7956,8189,9623,9884,10010,10302,10645,10957,11180,14581,14757,16725,26776,27374,
#Partially deleted in new
chr14	105140981	105168824	chr14:105140981-105168824	1	-	105142694	105168420	0	25	2189,157,132,243,116,114,86,28,117,114,114,114,153,151,174,47,114,114,120,131,61,252,58,351,470,	0,2500,3948,4749,5403,5629,6344,6518,6790,7134,7344,7763,7955,8188,9622,9883,10301,10644,10956,11179,14580,14756,16724,26775,27373,
#Deleted in new
chr14	105141754	105147358	chr14:105141754-105147358	0	-	105141754	105141754	8553170	7	1416,157,132,243,116,178,33,	0,1727,3175,3976,4630,4856,5571,
#Deleted in new
chr14	105146961	105148394	chr14:105146961-105148394	0	-	105146961	105146961	8553170	4	566,117,114,69,	0,810,1154,1364,
#Deleted in new
chr14	105150777	105150864	chr14:105150777-105150864	3	-	105150777	105150777	5263520	1	87,	0,
#Partially deleted in new
chr14	105151639	105157809	chr14:105151639-105157809	0	-	105151639	105151639	8553170	6	100,120,131,61,252,104,	0,298,521,3922,4098,6066,
#Partially deleted in new
chr14	105152193	105181194	chr14:105152193-105181194	3	-	105152193	105152193	8553170	5	98,61,252,58,66,	0,3368,3544,5512,28935,
#Deleted in new
chr14	105172937	105173697	chr14:105172937-105173697	0	-	105172937	105172937	8553170	2	324,217,	0,543,
#Partially deleted in new
chr14	105172938	105181303	chr14:105172938-105181303	3	-	105173020	105181209	0	5	323,238,65,44,175,	0,3595,4024,4753,8190,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr14	105175487	105181323	chr14:105175487-105181323	0	-	105175487	105175487	8553170	5	500,238,65,44,195,	0,1046,1475,2204,5641,
#Deleted in new
chr14	105175864	105177757	chr14:105175864-105177757	0	-	105175864	105175864	8553170	4	123,238,29,66,	0,669,1098,1827,
#Partially deleted in new
chr14	105176425	105181243	chr14:105176425-105181243	0	-	105176425	105176425	8553170	4	346,65,44,115,	0,537,1266,4703,
#Partially deleted in new
chr14	105176740	105181312	chr14:105176740-105181312	0	-	105177159	105181209	789624	5	31,65,203,44,184,	0,222,382,951,4388,
#Partially deleted in new
chr14	105209285	105300725	chr14:105209285-105300725	1	-	105210550	105300629	789624	17	1303,172,52,257,56,82,62,267,93,40,127,94,150,73,32,174,280,	0,1836,2827,8258,9712,9865,10783,12362,16783,16965,17348,19534,31979,43221,47232,63435,91160,
#Partially deleted in new
chr14	105209285	105247894	chr14:105209285-105247894	1	-	105210550	105241346	789624	14	1303,172,52,257,56,82,62,267,93,40,127,94,150,824,	0,1836,2827,8258,9712,9865,10783,12362,16783,16965,17348,19534,31979,37785,
#Partially deleted in new
chr14	105209285	105300688	chr14:105209285-105300688	3	-	105210550	105300629	789624	18	1303,172,52,257,56,82,62,267,93,40,127,94,150,73,32,174,81,243,	0,1836,2827,8258,9712,9865,10783,12362,16783,16965,17348,19534,31979,43221,47232,63435,77010,91160,
#Partially deleted in new
chr14	105209288	105249404	chr14:105209288-105249404	1	-	105210550	105228893	789624	13	1300,172,52,257,56,82,62,267,93,40,127,94,256,	0,1833,2824,8255,9709,9862,10780,12359,16780,16962,17345,19531,39860,
#Partially deleted in new
chr14	105209288	105221820	chr14:105209288-105221820	0	-	105209288	105209288	8553170	6	1300,1043,257,56,980,173,	0,1833,8255,9709,9862,12359,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	105209288	105222545	chr14:105209288-105222545	0	-	105209288	105209288	8553170	8	1300,172,52,257,56,82,59,898,	0,1833,2824,8255,9709,9862,10780,12359,
#Partially deleted in new
chr14	105209428	105247193	chr14:105209428-105247193	1	-	105209511	105241346	789624	5	222,90,94,150,328,	0,17242,19391,31836,37437,
#Partially deleted in new
chr14	105209428	105247193	chr14:105209428-105247193	1	-	105209575	105241346	789624	7	231,59,40,127,94,150,123,	0,16674,16822,17205,19391,31836,37642,
#Partially deleted in new
chr14	105209495	105300992	chr14:105209495-105300992	1	-	105209495	105241346	789624	11	164,48,40,127,94,150,73,32,174,81,547,	0,16618,16755,17138,19324,31769,43011,47022,63225,76800,90950,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	105210077	105213428	chr14:105210077-105213428	0	-	105210077	105210077	8553170	3	511,172,1316,	0,1044,2035,
#Partially deleted in new
chr14	105210277	105315490	chr14:105210277-105315490	1	-	105210550	105272814	789624	18	311,172,52,257,56,82,62,267,93,40,127,94,150,73,32,174,81,169,	0,844,1835,7266,8720,8873,9791,11370,15791,15973,16356,18542,30987,42229,46240,62443,76018,105044,
#Partially deleted in new
chr14	105210366	105315589	chr14:105210366-105315589	1	-	105210550	105272814	789624	18	222,172,52,257,56,148,62,267,93,40,127,94,150,73,32,174,81,268,	0,755,1746,7177,8631,8784,9702,11281,15702,15884,16267,18453,30898,42140,46151,62354,75929,104955,
#Deleted in new
chr14	105217212	105220128	chr14:105217212-105220128	0	-	105217212	105217212	8553170	5	66,257,56,82,60,	0,331,1785,1938,2856,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr14	105217632	105228270	chr14:105217632-105228270	0	-	105217632	105217632	8553170	8	168,56,82,62,267,93,40,1637,	0,1365,1518,2436,4015,8436,8618,9001,
#Deleted in new
chr14	105218997	105222152	chr14:105218997-105222152	0	-	105218997	105218997	8553170	4	56,148,62,505,	0,153,1071,2650,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	105221647	105242605	chr14:105221647-105242605	0	-	105221647	105241346	789624	6	267,93,40,127,94,1341,	0,4421,4603,4986,7172,19617,
#Partially deleted in new
chr14	105221884	105249392	chr14:105221884-105249392	0	-	105221884	105241346	789624	7	30,93,40,127,94,150,244,	0,4184,4366,4749,6935,19380,27264,
#Partially deleted in new
chr14	105226122	105300468	chr14:105226122-105300468	0	-	105226122	105300468	789624	7	39,40,127,94,150,81,23,	0,128,511,2697,15142,60173,74323,
#Partially deleted in new
chr14	105228860	105248911	chr14:105228860-105248911	0	-	105228860	105241346	789624	3	53,150,837,	0,12404,19214,
#Partially deleted in new
chr14	105241304	105248539	chr14:105241304-105248539	0	-	105241304	105241346	789624	2	110,1252,	0,5983,
#Deleted in new
chr14	105248489	105251084	chr14:105248489-105251084	3	+	105248870	105250672	0	5	10,308,91,119,1445,	0,288,667,870,1150,
#Deleted in new
chr14	105248537	105250437	chr14:105248537-105250437	0	+	105248870	105250437	789624	5	23,304,91,119,798,	0,244,619,822,1102,
#Deleted in new
chr14	105248573	105251093	chr14:105248573-105251093	1	+	105248870	105250672	0	4	512,91,119,1454,	0,583,786,1066,
#Deleted in new
chr14	105248625	105251093	chr14:105248625-105251093	1	+	105249166	105250672	0	3	622,119,1454,	0,734,1014,
#Deleted in new
chr14	105248670	105251084	chr14:105248670-105251084	1	+	105249166	105250672	0	5	225,68,91,119,1445,	0,347,486,689,969,
#Deleted in new
chr14	105249187	105250296	chr14:105249187-105250296	0	+	105249187	105249187	8553170	2	291,657,	0,452,
#Partially deleted in new
chr14	105252514	105315589	chr14:105252514-105315589	0	-	105252514	105272814	789624	5	65,32,174,81,248,	0,4003,20206,33781,62827,
#Partially deleted in new
chr14	105256185	105301278	chr14:105256185-105301278	1	-	105256361	105300629	789624	4	364,174,81,833,	0,16535,30110,44260,
#Partially deleted in new
chr14	105300562	105394672	chr14:105300562-105394672	1	+	105348574	105394672	789624	24	417,88,90,126,163,74,57,60,158,91,75,143,133,105,107,155,111,109,43,43,136,227,114,119,	0,47930,51815,54489,66650,67511,67896,69278,76205,79176,79517,80394,81351,81914,82244,82796,83790,84316,89398,90644,91068,92056,92659,93991,
#Partially deleted in new
chr14	105314414	105395206	chr14:105314414-105395206	3	+	105314918	105394672	789624	24	623,88,90,126,163,74,81,60,158,91,75,143,133,105,107,155,111,109,43,43,136,227,114,653,	0,34078,37963,40637,52798,53659,54044,55426,62353,65324,65665,66542,67499,68062,68392,68944,69938,70464,75546,76792,77216,78204,78807,80139,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr14	105314743	105398147	chr14:105314743-105398147	1	+	105314918	105394672	789624	25	294,88,90,126,163,74,81,60,158,91,75,143,145,105,107,155,111,109,33,43,43,136,227,114,3594,	0,33749,37634,40308,52469,53330,53715,55097,62024,64995,65336,66213,67170,67733,68063,68615,69609,70135,70941,75217,76463,76887,77875,78478,79810,
#Partially deleted in new
chr14	105314886	105394869	chr14:105314886-105394869	1	+	105314918	105394672	789624	23	151,88,126,163,74,81,60,158,91,75,143,133,105,107,155,111,109,43,43,136,227,114,316,	0,33606,40165,52326,53187,53572,54954,61881,64852,65193,66070,67027,67590,67920,68472,69466,69992,75074,76320,76744,77732,78335,79667,
#Partially deleted in new
chr14	105314889	105348746	chr14:105314889-105348746	0	+	105314889	105314889	8553170	2	148,254,	0,33603,
#Partially deleted in new
chr14	105336424	105367250	chr14:105336424-105367250	0	+	105348574	105367250	789624	5	234,88,90,126,38,	0,12068,15953,18627,30788,
#Partially deleted in new
chr14	105355048	105370158	chr14:105355048-105370158	0	+	105355048	105355048	8553170	5	129,163,74,81,318,	0,12164,13025,13410,14792,
#Partially deleted in new
chr14	105368084	105395213	chr14:105368084-105395213	0	+	105368084	105368084	8553170	18	63,81,60,158,91,75,143,133,105,107,1105,109,43,43,136,227,114,660,	0,374,1756,8683,11654,11995,12872,13829,14392,14722,15274,16794,21876,23122,23546,24534,25137,26469,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	105370417	105372918	chr14:105370417-105372918	3	+	105370417	105370417	8553170	1	2501,	0,
#Deleted in new
chr14	105374617	105374971	chr14:105374617-105374971	7	+	105374617	105374617	16724991	1	354,	0,
#Deleted in new
chr14	105381923	105391598	chr14:105381923-105391598	0	+	105381923	105381923	8553170	8	135,105,107,155,111,109,43,392,	0,553,883,1435,2429,2955,8037,9283,
#Partially deleted in new
chr14	105383118	105395251	chr14:105383118-105395251	0	+	105383118	105383118	8553170	9	395,111,109,43,43,136,227,114,698,	0,1234,1760,6842,8088,8512,9500,10103,11435,
#Deleted in new
chr14	105388621	105391749	chr14:105388621-105391749	0	+	105388621	105388621	8553170	2	1382,543,	0,2585,
#Deleted in new
chr14	105390236	105393335	chr14:105390236-105393335	0	+	105390236	105390236	8553170	4	1013,267,227,114,	0,1263,2382,2985,
#Partially deleted in new
chr14	105391458	105394743	chr14:105391458-105394743	0	+	105391458	105391458	8553170	4	308,85,114,190,	0,1302,1763,3095,
#Deleted in new
chr14	105392004	105393543	chr14:105392004-105393543	0	+	105392004	105392004	8553170	2	841,322,	0,1217,
#Partially deleted in new
chr14	105398578	105450106	chr14:105398578-105450106	0	+	105399340	105438713	789624	6	57,189,68,94,51,49,	0,723,40093,46839,50780,51479,
#Partially deleted in new
chr14	105398582	105413859	chr14:105398582-105413859	3	+	105399340	105411833	789624	4	53,189,129,2200,	0,719,12785,13077,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	105416883	105419739	chr14:105416883-105419739	3	-	105416883	105416883	789624	3	1426,135,718,	0,1798,2138,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	105417580	105419739	chr14:105417580-105419739	0	-	105417580	105417580	789624	2	729,718,	0,1441,
#Partially deleted in new
chr14	105419819	105470727	chr14:105419819-105470727	1	+	105464721	105470215	789624	22	244,68,94,51,127,64,118,103,100,189,75,59,116,152,190,90,153,36,12,32,152,663,	0,18852,25598,29539,30238,30441,34373,38450,40538,40945,43364,43673,44212,44596,44854,45274,46606,46887,48518,49647,50021,50245,
#Partially deleted in new
chr14	105419821	105470729	chr14:105419821-105470729	3	+	105420035	105470215	0	21	242,68,94,51,127,64,118,103,100,189,75,59,116,152,190,90,153,36,32,152,665,	0,18850,25596,29537,30236,30439,34371,38448,40536,40943,43362,43671,44210,44594,44852,45272,46604,46885,49645,50019,50243,
#Partially deleted in new
chr14	105419891	105470729	chr14:105419891-105470729	1	+	105420035	105470215	789624	20	172,68,94,51,127,64,118,103,100,189,75,59,116,152,190,90,153,32,152,665,	0,18780,25526,29467,30166,30369,34301,38378,40466,40873,43292,43601,44140,44524,44782,45202,46534,49575,49949,50173,
#Partially deleted in new
chr14	105419937	105470729	chr14:105419937-105470729	1	+	105420035	105470215	0	20	126,68,94,127,64,118,103,100,189,75,59,116,152,190,90,153,36,32,152,665,	0,18734,25480,30120,30323,34255,38332,40420,40827,43246,43555,44094,44478,44736,45156,46488,46769,49529,49903,50127,
#Partially deleted in new
chr14	105420015	105470238	chr14:105420015-105470238	0	+	105420035	105464563	0	21	48,68,94,51,127,64,118,103,100,189,75,59,116,105,190,90,153,36,32,152,174,	0,18656,25402,29343,30042,30245,34177,38254,40342,40749,43168,43477,44016,44447,44658,45078,46410,46691,49451,49825,50049,
#Partially deleted in new
chr14	105420018	105454298	chr14:105420018-105454298	0	+	105420018	105450066	789624	6	45,68,51,127,64,106,	0,18653,29340,30039,30242,34174,
#Partially deleted in new
chr14	105438671	105463231	chr14:105438671-105463231	0	+	105438671	105438671	8553170	8	68,94,267,118,103,100,189,48,	0,6746,11386,15521,19598,21686,22093,24512,
#Partially deleted in new
chr14	105438714	105460800	chr14:105438714-105460800	0	+	105438714	105445713	789624	10	25,94,186,51,127,64,118,103,100,36,	0,6703,6952,10644,11343,11546,15478,19555,21643,22050,
#Partially deleted in new
chr14	105449239	105460953	chr14:105449239-105460953	0	+	105449239	105449239	8553170	7	170,127,64,118,103,100,189,	0,818,1021,4953,9030,11118,11525,
#Partially deleted in new
chr14	105458343	105470729	chr14:105458343-105470729	0	+	105458343	105470215	789624	15	29,100,189,75,59,116,152,190,90,153,36,12,32,152,665,	0,2014,2421,4840,5149,5688,6072,6330,6750,8082,8363,9994,11123,11497,11721,
#Partially deleted in new
chr14	105460880	105465183	chr14:105460880-105465183	0	+	105460880	105460880	8553170	6	73,75,59,116,401,90,	0,2303,2612,3151,3582,4213,
#Partially deleted in new
chr14	105460893	105464702	chr14:105460893-105464702	0	+	105460893	105460893	8553170	5	60,59,116,152,29,	0,2599,3138,3522,3780,
#Deleted in new
chr14	105463258	105464567	chr14:105463258-105464567	0	+	105463258	105463258	8553170	3	293,116,152,	0,773,1157,
#Deleted in new
chr14	105463552	105467192	chr14:105463552-105467192	0	+	105463552	105463552	8553170	6	595,152,190,90,153,486,	0,863,1121,1541,2873,3154,
#Deleted in new
chr14	105465333	105470542	chr14:105465333-105470542	0	+	105465333	105465333	8553170	5	1245,36,32,152,478,	0,1373,4133,4507,4731,
#Deleted in new
chr14	105467792	105470617	chr14:105467792-105470617	3	-	105467792	105467792	8553170	2	142,303,	0,2522,
#Deleted in new
chr14	105468108	105470207	chr14:105468108-105470207	0	+	105468108	105468108	8553170	4	241,32,152,143,	0,1358,1732,1956,
#Deleted in new
chr14	105468974	105470230	chr14:105468974-105470230	0	+	105468974	105468974	8553170	3	524,152,166,	0,866,1090,
#Deleted in new
chr14	105469068	105470297	chr14:105469068-105470297	0	+	105469068	105469068	8553170	4	92,32,152,233,	0,398,772,996,
#Deleted in new
chr14	105469466	105470238	chr14:105469466-105470238	0	+	105469466	105469466	8553170	2	526,174,	0,598,
#Deleted in new
chr14	105472961	105479694	chr14:105472961-105479694	1	+	105473247	105479653	0	8	551,95,58,141,69,95,58,109,	0,5304,5488,5769,6017,6163,6474,6624,
#Deleted in new
chr14	105474149	105480170	chr14:105474149-105480170	3	+	105474862	105479653	0	8	756,95,58,141,69,95,58,585,	0,4116,4300,4581,4829,4975,5286,5436,
#Deleted in new
chr14	105474813	105480157	chr14:105474813-105480157	0	+	105474813	105479653	789624	4	92,95,58,572,	0,4311,4622,4772,
#Deleted in new
chr14	105474817	105480067	chr14:105474817-105480067	0	+	105474817	105479653	789624	7	88,58,141,69,95,58,482,	0,3632,3913,4161,4307,4618,4768,
#Deleted in new
chr14	105474822	105479216	chr14:105474822-105479216	0	+	105474822	105474822	8553170	5	83,242,141,69,92,	0,3443,3908,4156,4302,
#Deleted in new
chr14	105474831	105480152	chr14:105474831-105480152	0	+	105474831	105474831	8553170	7	74,95,58,141,69,369,567,	0,3434,3618,3899,4147,4293,4754,
#Deleted in new
chr14	105474836	105480160	chr14:105474836-105480160	0	+	105474836	105474836	789624	7	69,95,422,69,95,58,575,	0,3429,3613,4142,4288,4599,4749,
#Deleted in new
chr14	105475310	105478776	chr14:105475310-105478776	0	+	105475310	105475310	8553170	5	102,281,95,58,46,	0,891,2955,3139,3420,
#Deleted in new
chr14	105475858	105480161	chr14:105475858-105480161	0	+	105475858	105475858	789624	8	884,95,58,141,69,95,58,576,	0,2407,2591,2872,3120,3266,3577,3727,
#Deleted in new
chr14	105476763	105480124	chr14:105476763-105480124	0	+	105476763	105476763	789624	8	838,95,58,141,69,95,58,539,	0,1502,1686,1967,2215,2361,2672,2822,
#Deleted in new
chr14	105478591	105479293	chr14:105478591-105479293	0	+	105478591	105478591	8553170	2	280,315,	0,387,
#Deleted in new
chr14	105486316	105488791	chr14:105486316-105488791	3	+	105487259	105488511	789624	5	983,95,58,46,129,	0,1849,2014,2154,2346,
#Deleted in new
chr14	105486316	105488785	chr14:105486316-105488785	0	+	105486316	105486316	8553170	3	2072,46,123,	0,2154,2346,
#Deleted in new
chr14	105486866	105488947	chr14:105486866-105488947	1	+	105487259	105488511	789624	6	106,87,95,58,46,285,	0,346,1299,1464,1604,1796,
#Deleted in new
chr14	105486916	105488791	chr14:105486916-105488791	1	+	105487259	105488511	789624	6	56,101,95,58,46,129,	0,282,1249,1414,1554,1746,
#Deleted in new
chr14	105487196	105488785	chr14:105487196-105488785	0	+	105487196	105487196	8553170	2	1320,123,	0,1466,
#Deleted in new
chr14	105487198	105492267	chr14:105487198-105492267	2	+	105487259	105488511	8553170	7	101,95,58,46,138,79,161,	0,967,1132,1272,3782,4423,4908,
#Deleted in new
chr14	105487853	105488789	chr14:105487853-105488789	0	+	105487853	105487853	8553170	4	407,58,46,127,	0,477,617,809,
#Deleted in new
chr14	105488183	105491659	chr14:105488183-105491659	0	+	105488183	105488183	8553170	4	205,46,146,38,	0,287,2797,3438,
#Deleted in new
chr14	105488211	105491659	chr14:105488211-105491659	0	+	105488211	105488511	789624	5	49,58,46,146,38,	0,119,259,2769,3410,
#Deleted in new
chr14	105488220	105491659	chr14:105488220-105491659	0	+	105488220	105488511	789624	6	40,58,46,132,146,38,	0,110,250,442,2760,3401,
#Deleted in new
chr14	105488220	105491659	chr14:105488220-105491659	0	+	105488220	105488511	789624	6	40,58,46,285,146,38,	0,110,250,442,2760,3401,
#Deleted in new
chr14	105488220	105491659	chr14:105488220-105491659	1	+	105488220	105488511	789624	7	40,58,46,285,367,146,38,	0,110,250,442,1038,2760,3401,
#Partially deleted in new
chr14	105489854	105499575	chr14:105489854-105499575	1	+	105491102	105498946	789624	8	131,152,79,203,156,87,180,959,	0,1126,1767,2252,2724,7502,7943,8762,
#Deleted in new
chr14	105489862	105492243	chr14:105489862-105492243	0	+	105491102	105492243	789624	4	181,146,79,137,	0,1118,1759,2244,
#Partially deleted in new
chr14	105489875	105497443	chr14:105489875-105497443	0	+	105491102	105497443	789624	7	110,146,79,203,156,99,87,	0,1105,1746,2231,2703,3959,7481,
#Partially deleted in new
chr14	105490123	105498696	chr14:105490123-105498696	0	+	105491102	105498696	789624	9	114,146,79,203,156,99,87,180,80,	0,857,1498,1983,2455,3711,7233,7674,8493,
#Partially deleted in new
chr14	105490182	105499186	chr14:105490182-105499186	1	+	105491102	105498946	789624	8	55,146,79,203,156,87,180,570,	0,798,1439,1924,2396,7174,7615,8434,
#Partially deleted in new
chr14	105490182	105498784	chr14:105490182-105498784	0	+	105490182	105490182	8553170	8	55,146,79,203,156,87,180,168,	0,798,1439,1924,2396,7174,7615,8434,
#Deleted in new
chr14	105490295	105492603	chr14:105490295-105492603	0	+	105491102	105492603	789624	5	513,146,79,203,25,	0,685,1326,1811,2283,
#Partially deleted in new
chr14	105491064	105497875	chr14:105491064-105497875	0	+	105492258	105497875	789624	7	90,79,162,156,99,87,78,	0,557,1083,1514,2770,6292,6733,
#Deleted in new
chr14	105491233	105492691	chr14:105491233-105492691	0	+	105492258	105492691	789624	4	127,79,203,113,	0,388,873,1345,
#Partially deleted in new
chr14	105491248	105499168	chr14:105491248-105499168	3	+	105491375	105498946	789624	8	274,79,203,156,99,87,180,552,	0,373,858,1330,2586,6108,6549,7368,
#Partially deleted in new
chr14	105491254	105499182	chr14:105491254-105499182	1	+	105491375	105498946	789624	9	268,79,203,156,99,207,87,180,566,	0,367,852,1324,2580,4625,6102,6543,7362,
#Deleted in new
chr14	105491261	105492717	chr14:105491261-105492717	0	+	105491261	105491261	8553170	3	439,203,139,	0,845,1317,
#Partially deleted in new
chr14	105491267	105499209	chr14:105491267-105499209	1	+	105491375	105498946	789624	7	255,79,203,156,87,180,593,	0,354,839,1311,6089,6530,7349,
#Partially deleted in new
chr14	105491271	105497657	chr14:105491271-105497657	0	+	105491271	105491271	8553170	6	251,79,203,156,99,301,	0,350,835,1307,2563,6085,
#Partially deleted in new
chr14	105491325	105497413	chr14:105491325-105497413	0	+	105491325	105491325	8553170	5	375,162,156,99,57,	0,822,1253,2509,6031,
#Partially deleted in new
chr14	105491366	105499228	chr14:105491366-105499228	1	+	105492258	105498946	789624	7	156,62,162,99,87,180,612,	0,255,781,2468,5990,6431,7250,
#Partially deleted in new
chr14	105491366	105499228	chr14:105491366-105499228	0	+	105491375	105492298	789624	7	156,63,161,99,87,180,612,	0,255,782,2468,5990,6431,7250,
#Partially deleted in new
chr14	105491393	105498946	chr14:105491393-105498946	1	+	105492258	105498946	789624	7	129,79,203,99,87,180,330,	0,228,713,2441,5963,6404,7223,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	105494153	105499229	chr14:105494153-105499229	0	+	105494153	105494153	8553170	2	3824,613,	0,4463,
#Deleted in new
chr14	105497625	105499229	chr14:105497625-105499229	0	+	105497625	105497625	8553170	2	352,613,	0,991,
#Deleted in new
chr14	105526602	105530202	chr14:105526602-105530202	3	+	105528834	105529794	789624	2	51,1481,	0,2119,
#Deleted in new
chr14	105527104	105528753	chr14:105527104-105528753	0	+	105527104	105527104	8553170	2	334,32,	0,1617,
#Deleted in new
chr14	105528623	105530202	chr14:105528623-105530202	1	+	105528834	105529794	789624	2	38,1481,	0,98,
#Deleted in new
chr14	105536860	105537239	chr14:105536860-105537239	7	-	105536860	105536860	16724991	1	379,	0,
#Partially deleted in new
chr14	105546609	105549694	chr14:105546609-105549694	7	-	105546609	105546609	16724991	2	1043,181,	0,2904,
#Partially deleted in new
chr14	105583730	105588395	chr14:105583730-105588395	3	-	105584153	105588395	789624	5	123,236,333,321,307,	0,402,3268,3823,4358,
#Partially deleted in new
chr14	105586888	105588395	chr14:105586888-105588395	0	-	105586936	105588395	0	3	443,321,307,	0,665,1200,
#Partially deleted in new
chr14	105597690	105601728	chr14:105597690-105601728	3	-	105597690	105601728	789624	6	84,122,324,324,321,310,	0,168,2383,2790,3200,3728,
#Partially deleted in new
chr14	105599940	105601728	chr14:105599940-105601728	0	-	105600065	105601728	0	4	457,324,321,310,	0,540,950,1478,
#Partially deleted in new
chr14	105620505	105626066	chr14:105620505-105626066	3	-	105621911	105626066	789624	6	1490,131,315,330,36,295,	0,2562,3978,4390,4838,5266,
#Partially deleted in new
chr14	105621115	105621180	chr14:105621115-105621180	3	+	105621115	105621115	5263520	1	65,	0,
#Partially deleted in new
chr14	105624340	105626066	chr14:105624340-105626066	0	-	105624475	105626066	0	4	458,330,36,295,	0,555,1003,1431,
#Partially deleted in new
chr14	105639558	105644790	chr14:105639558-105644790	3	-	105640964	105644790	789624	6	1490,131,315,327,36,295,	0,2220,3652,4064,4509,4937,
#Partially deleted in new
chr14	105640167	105640232	chr14:105640167-105640232	3	+	105640167	105640167	5263520	1	65,	0,
#Partially deleted in new
chr14	105643067	105644790	chr14:105643067-105644790	0	-	105643202	105644790	0	4	458,327,36,295,	0,555,1000,1428,
#Partially deleted in new
chr14	105647923	105649057	chr14:105647923-105649057	3	-	105647923	105647923	8553170	3	107,142,299,	0,402,835,
#Partially deleted in new
chr14	105664632	105669843	chr14:105664632-105669843	7	-	105664632	105664632	16724991	6	77,131,313,330,34,293,	0,2203,3620,4030,4761,4918,
#Partially deleted in new
chr14	105672307	105673314	chr14:105672307-105673314	7	-	105672307	105672307	16724991	1	1007,	0,
#Deleted in new
chr14	105703994	105708665	chr14:105703994-105708665	3	-	105704387	105708665	789624	5	92,218,333,360,307,	0,372,3235,3790,4364,
#Deleted in new
chr14	105707117	105708665	chr14:105707117-105708665	0	-	105707167	105708665	0	3	445,360,307,	0,667,1241,
#Deleted in new
chr14	105721793	105722527	chr14:105721793-105722527	7	-	105721793	105721793	16724991	2	332,319,	0,415,
#Deleted in new
chr14	105736342	105743071	chr14:105736342-105743071	3	-	105737761	105743071	789624	6	1503,131,315,330,45,295,	0,3720,5138,5550,5998,6434,
#Deleted in new
chr14	105741337	105743071	chr14:105741337-105743071	0	-	105741472	105743071	0	4	458,330,45,295,	0,555,1003,1439,
#Deleted in new
chr14	105741338	105743071	chr14:105741338-105743071	0	-	105741472	105743071	789624	5	457,67,158,45,295,	0,554,726,1002,1438,
#Deleted in new
chr14	105764502	105771405	chr14:105764502-105771405	3	-	105765913	105771405	789624	9	1495,131,315,330,45,45,45,51,294,	0,3310,4742,5154,5602,5790,5978,6166,6609,
#Deleted in new
chr14	105769101	105771405	chr14:105769101-105771405	0	-	105769236	105771405	8553170	7	458,330,45,45,45,51,294,	0,555,1003,1191,1379,1567,2010,
#Partially deleted in new
chr14	105785504	105785831	chr14:105785504-105785831	7	-	105785504	105785504	16724991	1	327,	0,
#Partially deleted in new
chr14	105836764	105845677	chr14:105836764-105845677	2	-	105837150	105845677	789624	7	395,158,324,324,72,102,303,	0,679,3602,4136,5196,8060,8610,
#Partially deleted in new
chr14	105838400	105845678	chr14:105838400-105845678	1	-	105838400	105845678	0	6	29,324,324,72,102,304,	0,1966,2500,3560,6424,6974,
#Deleted in new
chr14	105851704	105856218	chr14:105851704-105856218	3	-	105851965	105856218	0	6	270,116,333,318,336,313,	0,443,2700,3212,3775,4201,
#Deleted in new
chr14	105854219	105856218	chr14:105854219-105856218	0	-	105854342	105856218	0	4	518,318,336,313,	0,697,1260,1686,
#Deleted in new
chr14	105857512	105857572	chr14:105857512-105857572	3	-	105857512	105857512	5263520	1	60,	0,
#Deleted in new
chr14	105858123	105858175	chr14:105858123-105858175	3	-	105858123	105858123	5263520	1	52,	0,
#Deleted in new
chr14	105858164	105858242	chr14:105858164-105858242	3	-	105858164	105858164	5263520	1	78,	0,
#Deleted in new
chr14	105859483	105859553	chr14:105859483-105859553	3	-	105859483	105859483	5263520	1	70,	0,
#Deleted in new
chr14	105863197	105863258	chr14:105863197-105863258	3	-	105863197	105863258	789624	1	61,	0,
#Deleted in new
chr14	105863415	105863465	chr14:105863415-105863465	7	-	105863415	105863415	16724991	1	50,	0,
#Deleted in new
chr14	105863813	105863862	chr14:105863813-105863862	3	-	105863813	105863862	789624	1	49,	0,
#Deleted in new
chr14	105864214	105864260	chr14:105864214-105864260	3	-	105864214	105864260	789624	1	46,	0,
#Deleted in new
chr14	105864586	105864635	chr14:105864586-105864635	3	-	105864586	105864635	789624	1	49,	0,
#Deleted in new
chr14	105864792	105864852	chr14:105864792-105864852	7	-	105864792	105864792	16724991	1	60,	0,
#Deleted in new
chr14	105865198	105865250	chr14:105865198-105865250	3	-	105865198	105865250	789624	1	52,	0,
#Deleted in new
chr14	105865406	105865458	chr14:105865406-105865458	3	-	105865406	105865458	789624	1	52,	0,
#Deleted in new
chr14	105865550	105865561	chr14:105865550-105865561	3	-	105865550	105865561	8553170	1	11,	0,
#Deleted in new
chr14	105865623	105865678	chr14:105865623-105865678	7	-	105865623	105865623	16724991	1	55,	0,
#Deleted in new
chr14	105881033	105881053	chr14:105881033-105881053	3	-	105881033	105881053	8553170	1	20,	0,
#Deleted in new
chr14	105881538	105881556	chr14:105881538-105881556	3	-	105881538	105881556	8553170	1	18,	0,
#Deleted in new
chr14	105883902	105883922	chr14:105883902-105883922	3	-	105883902	105883922	8553170	1	20,	0,
#Deleted in new
chr14	105884869	105884888	chr14:105884869-105884888	3	-	105884869	105884888	8553170	1	19,	0,
#Deleted in new
chr14	105886030	105886061	chr14:105886030-105886061	3	-	105886030	105886061	8553170	1	31,	0,
#Deleted in new
chr14	105888550	105888578	chr14:105888550-105888578	3	-	105888550	105888578	8553170	1	28,	0,
#Deleted in new
chr14	105890083	105896109	chr14:105890083-105896109	0	+	105890083	105890083	8553170	2	114,127,	0,5899,
#Deleted in new
chr14	105891190	105891207	chr14:105891190-105891207	3	-	105891190	105891207	8553170	1	17,	0,
#Deleted in new
chr14	105891698	105891719	chr14:105891698-105891719	3	-	105891698	105891719	789624	1	21,	0,
#Deleted in new
chr14	105893541	105893561	chr14:105893541-105893561	3	-	105893541	105893561	8553170	1	20,	0,
#Deleted in new
chr14	105894507	105894523	chr14:105894507-105894523	3	-	105894507	105894523	8553170	1	16,	0,
#Deleted in new
chr14	105894645	105896577	chr14:105894645-105896577	3	+	105894645	105894645	8553170	4	36,106,126,102,	0,247,1337,1830,
#Deleted in new
chr14	105895633	105895670	chr14:105895633-105895670	3	-	105895633	105895670	8553170	1	37,	0,
#Deleted in new
chr14	105897956	105897987	chr14:105897956-105897987	3	-	105897956	105897987	8553170	1	31,	0,
#Deleted in new
chr14	105900637	105900654	chr14:105900637-105900654	3	-	105900637	105900654	8553170	1	17,	0,
#Deleted in new
chr14	105901141	105901162	chr14:105901141-105901162	3	-	105901141	105901162	789624	1	21,	0,
#Deleted in new
chr14	105902648	105902671	chr14:105902648-105902671	3	-	105902648	105902671	789624	1	23,	0,
#Deleted in new
chr14	105903615	105903631	chr14:105903615-105903631	3	-	105903615	105903631	8553170	1	16,	0,
#Deleted in new
chr14	105904496	105904527	chr14:105904496-105904527	3	-	105904497	105904527	789624	1	31,	0,
#Deleted in new
chr14	105904680	105904711	chr14:105904680-105904711	3	-	105904681	105904711	789624	1	31,	0,
#Deleted in new
chr14	105907210	105907241	chr14:105907210-105907241	3	-	105907210	105907241	8553170	1	31,	0,
#Deleted in new
chr14	105909906	105909923	chr14:105909906-105909923	3	-	105909906	105909923	8553170	1	17,	0,
#Deleted in new
chr14	105910409	105910427	chr14:105910409-105910427	3	-	105910409	105910427	8553170	1	18,	0,
#Deleted in new
chr14	105912256	105912276	chr14:105912256-105912276	3	-	105912256	105912276	8553170	1	20,	0,
#Deleted in new
chr14	105913221	105913237	chr14:105913221-105913237	3	-	105913221	105913237	8553170	1	16,	0,
#Deleted in new
chr14	105914358	105914389	chr14:105914358-105914389	3	-	105914358	105914389	789624	1	31,	0,
#Deleted in new
chr14	105916825	105916856	chr14:105916825-105916856	3	-	105916825	105916856	8553170	1	31,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr14	105917978	105932642	chr14:105917978-105932642	3	+	105917978	105917978	789624	6	839,109,146,103,108,8307,	0,3171,4220,4562,5036,6357,
#Deleted in new
chr14	105919501	105919518	chr14:105919501-105919518	3	-	105919501	105919518	789624	1	17,	0,
#Deleted in new
chr14	105939755	105940253	chr14:105939755-105940253	3	-	105939755	105940201	789624	2	314,101,	0,397,
#Deleted in new
chr14	105945209	105945389	chr14:105945209-105945389	7	-	105945209	105945209	16724991	1	180,	0,
#Deleted in new
chr14	105969728	105972269	chr14:105969728-105972269	7	-	105969728	105969728	16724991	2	1266,577,	0,1964,
#Deleted in new
chr14	105970167	105971166	chr14:105970167-105971166	5	-	105970167	105970167	16724991	1	999,	0,
#Deleted in new
chr14	105978519	105979146	chr14:105978519-105979146	7	-	105978519	105978519	16724991	1	627,	0,
#Deleted in new
chr14	105986581	105987083	chr14:105986581-105987083	3	-	105986581	105987019	0	2	307,110,	0,392,
#Deleted in new
chr14	106001533	106001824	chr14:106001533-106001824	7	-	106001533	106001533	16724991	1	291,	0,
#Deleted in new
chr14	106005094	106005574	chr14:106005094-106005574	3	-	106005094	106005532	789624	2	307,88,	0,392,
#Deleted in new
chr14	106011921	106012420	chr14:106011921-106012420	3	-	106011921	106012356	789624	2	307,110,	0,389,
#Deleted in new
chr14	106025144	106025630	chr14:106025144-106025630	3	-	106025144	106025581	789624	2	307,95,	0,391,
#Deleted in new
chr14	106037901	106038365	chr14:106037901-106038365	3	-	106037901	106038345	789624	2	312,66,	0,398,
#Deleted in new
chr14	106039665	106039764	chr14:106039665-106039764	7	-	106039665	106039665	16724991	1	99,	0,
#Deleted in new
chr14	106045599	106045860	chr14:106045599-106045860	7	-	106045599	106045599	16724991	1	261,	0,
#Deleted in new
chr14	106055548	106055998	chr14:106055548-106055998	7	-	106055548	106055548	16724991	2	301,46,	0,404,
#Deleted in new
chr14	106062150	106062683	chr14:106062150-106062683	3	-	106062150	106062604	0	2	305,125,	0,408,
#Deleted in new
chr14	106088121	106088573	chr14:106088121-106088573	3	-	106088121	106088573	789624	2	307,46,	0,406,
#Deleted in new
chr14	106107971	106108464	chr14:106107971-106108464	3	-	106107971	106108407	789624	2	307,103,	0,390,
#Deleted in new
chr14	106116634	106117204	chr14:106116634-106117204	3	-	106116634	106117084	789624	2	307,166,	0,404,
#Deleted in new
chr14	106120206	106120473	chr14:106120206-106120473	7	-	106120206	106120206	16724991	1	267,	0,
#Deleted in new
chr14	106122419	106122709	chr14:106122419-106122709	7	-	106122419	106122419	16724991	2	159,46,	0,244,
#Deleted in new
chr14	106129539	106130072	chr14:106129539-106130072	3	-	106129539	106129992	789624	2	304,126,	0,407,
#Deleted in new
chr14	106142286	106142577	chr14:106142286-106142577	7	-	106142286	106142286	16724991	1	291,	0,
#Deleted in new
chr14	106145890	106146131	chr14:106145890-106146131	7	-	106145890	106145890	16724991	1	241,	0,
#Deleted in new
chr14	106153623	106154163	chr14:106153623-106154163	3	-	106153623	106154083	789624	2	311,126,	0,414,
#Deleted in new
chr14	106163582	106163802	chr14:106163582-106163802	7	-	106163582	106163582	16724991	1	220,	0,
#Deleted in new
chr14	106165204	106165730	chr14:106165204-106165730	3	-	106165204	106165656	789624	2	305,120,	0,406,
#Deleted in new
chr14	106170748	106171052	chr14:106170748-106171052	7	-	106170748	106170748	16724991	1	304,	0,
#Deleted in new
chr14	106174341	106174760	chr14:106174341-106174760	7	-	106174341	106174341	16724991	2	306,28,	0,391,
#Deleted in new
chr14	106179553	106180519	chr14:106179553-106180519	7	-	106179553	106179553	16724991	1	966,	0,
#Deleted in new
chr14	106184900	106185394	chr14:106184900-106185394	3	-	106184900	106185335	789624	2	305,105,	0,389,
#Partially deleted in new
chr14	106196699	106196990	chr14:106196699-106196990	7	-	106196699	106196699	16724991	1	291,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr14	106206602	106208571	chr14:106206602-106208571	3	+	106206602	106206602	8553170	2	122,267,	0,1702,
#Partially deleted in new
chr14	106210935	106211453	chr14:106210935-106211453	3	-	106210935	106211391	789624	2	307,108,	0,410,
#Deleted in new
chr14	106235063	106235594	chr14:106235063-106235594	3	-	106235063	106235515	0	2	305,125,	0,406,
#Deleted in new
chr14	106257761	106258223	chr14:106257761-106258223	7	-	106257761	106257761	16724991	2	313,46,	0,416,
#Deleted in new
chr14	106263361	106263626	chr14:106263361-106263626	7	-	106263361	106263361	16724991	1	265,	0,
#Deleted in new
chr14	106264687	106264715	chr14:106264687-106264715	7	-	106264687	106264687	16724991	1	28,	0,
#Deleted in new
chr14	106268605	106269140	chr14:106268605-106269140	3	-	106268605	106269061	0	2	307,125,	0,410,
#Deleted in new
chr14	106276547	106277043	chr14:106276547-106277043	3	-	106276547	106276983	789624	2	305,106,	0,390,
#Deleted in new
chr14	106286810	106287657	chr14:106286810-106287657	7	-	106286810	106286810	16724991	1	847,	0,
#Deleted in new
chr14	106287673	106288828	chr14:106287673-106288828	3	+	106287673	106287673	8553170	2	293,759,	0,396,
#Deleted in new
chr14	106287719	106288372	chr14:106287719-106288372	0	+	106287719	106287719	789624	2	243,329,	0,324,
#Deleted in new
chr14	106289028	106289479	chr14:106289028-106289479	7	-	106289028	106289028	16724991	2	304,47,	0,404,
#Partially deleted in new
chr14	106293567	106293808	chr14:106293567-106293808	7	-	106293567	106293567	16724991	1	241,	0,
#Partially deleted in new
chr14	106301395	106301862	chr14:106301395-106301862	3	-	106301395	106301838	789624	2	311,70,	0,397,
#Partially deleted in new
chr14	106309416	106309666	chr14:106309416-106309666	7	-	106309416	106309416	16724991	1	250,	0,
#Partially deleted in new
chr14	106314650	106314975	chr14:106314650-106314975	7	-	106314650	106314650	16724991	1	325,	0,
#Partially deleted in new
chr14	106317822	106318236	chr14:106317822-106318236	7	-	106317822	106317822	16724991	2	284,46,	0,368,
#Partially deleted in new
chr14	106324253	106324760	chr14:106324253-106324760	3	-	106324253	106324688	789624	2	307,118,	0,389,
#Partially deleted in new
chr14	106329431	106329684	chr14:106329431-106329684	7	-	106329431	106329431	16724991	1	253,	0,
#Partially deleted in new
chr14	106331105	106331563	chr14:106331105-106331563	7	-	106331105	106331105	16724991	2	309,46,	0,412,
#Partially deleted in new
chr14	106335081	106335613	chr14:106335081-106335613	3	-	106335081	106335533	789624	2	305,126,	0,406,
#Partially deleted in new
chr14	106342679	106342980	chr14:106342679-106342980	7	-	106342679	106342679	16724991	1	301,	0,
#Partially deleted in new
chr14	106344384	106344833	chr14:106344384-106344833	7	-	106344384	106344384	16724991	2	309,46,	0,403,
#Partially deleted in new
chr14	106349282	106349792	chr14:106349282-106349792	3	-	106349282	106349720	789624	2	310,118,	0,392,
#Partially deleted in new
chr14	106354447	106354704	chr14:106354447-106354704	7	-	106354447	106354447	16724991	1	257,	0,
#Partially deleted in new
chr14	106356144	106356591	chr14:106356144-106356591	7	-	106356144	106356144	16724991	2	309,35,	0,412,
#Partially deleted in new
chr14	106359792	106360324	chr14:106359792-106360324	3	-	106359792	106360244	0	2	305,126,	0,406,
#Partially deleted in new
chr14	106367384	106367664	chr14:106367384-106367664	7	-	106367384	106367384	16724991	1	280,	0,
#Partially deleted in new
chr14	106369106	106369546	chr14:106369106-106369546	7	-	106369106	106369106	16724991	2	300,46,	0,394,
#Partially deleted in new
chr14	106373662	106374145	chr14:106373662-106374145	3	-	106373662	106374114	789624	2	302,98,	0,385,
#Partially deleted in new
chr14	106377299	106377733	chr14:106377299-106377733	7	-	106377299	106377299	16724991	2	304,46,	0,388,
#Partially deleted in new
chr14	106389391	106389858	chr14:106389391-106389858	3	-	106389391	106389843	789624	2	305,61,	0,406,
#Partially deleted in new
chr14	106392773	106393231	chr14:106392773-106393231	7	-	106392773	106392773	16724991	2	355,46,	0,412,
#Partially deleted in new
chr14	106396675	106397114	chr14:106396675-106397114	7	-	106396675	106396675	16724991	2	294,46,	0,393,
#Deleted in new
chr14	106410492	106411021	chr14:106410492-106411021	3	-	106410492	106410943	789624	2	302,124,	0,405,
#Deleted in new
chr14	106418017	106418299	chr14:106418017-106418299	7	-	106418017	106418017	16724991	1	282,	0,
#Deleted in new
chr14	106421710	106422218	chr14:106421710-106422218	3	-	106421710	106422168	0	2	308,117,	0,391,
#Deleted in new
chr14	106425358	106425654	chr14:106425358-106425654	7	-	106425358	106425358	16724991	1	296,	0,
#Partially deleted in new
chr14	106436414	106436555	chr14:106436414-106436555	7	-	106436414	106436414	16724991	1	141,	0,
#Partially deleted in new
chr14	106440949	106441007	chr14:106440949-106441007	7	-	106440949	106440949	16724991	1	58,	0,
#Partially deleted in new
chr14	106443132	106443583	chr14:106443132-106443583	7	-	106443132	106443132	16724991	2	303,45,	0,406,
#Deleted in new
chr14	106460091	106461055	chr14:106460091-106461055	7	-	106460091	106460091	16724991	1	964,	0,
#Deleted in new
chr14	106463255	106463691	chr14:106463255-106463691	7	-	106463255	106463255	16724991	2	312,49,	0,387,
#Deleted in new
chr14	106470263	106470800	chr14:106470263-106470800	3	-	106470263	106470720	789624	2	308,126,	0,411,
#Deleted in new
chr14	106472790	106473000	chr14:106472790-106473000	7	-	106472790	106472790	16724991	1	210,	0,
#Deleted in new
chr14	106478005	106478393	chr14:106478005-106478393	7	-	106478005	106478005	16724991	2	243,46,	0,342,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr14	106482438	106521073	chr14:106482438-106521073	3	+	106482438	106482438	8553170	4	199,747,91,462,	0,21887,23918,38173,
#Partially deleted in new
chr14	106482448	106490483	chr14:106482448-106490483	0	+	106482448	106482448	8553170	3	189,194,101,	0,6319,7934,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr14	106482467	106495448	chr14:106482467-106495448	1	+	106482467	106482467	789624	3	170,194,1292,	0,6300,11689,
#Deleted in new
chr14	106489344	106489756	chr14:106489344-106489756	7	-	106489344	106489344	16724991	2	298,40,	0,372,
#Deleted in new
chr14	106494133	106494383	chr14:106494133-106494383	7	-	106494133	106494133	16724991	1	250,	0,
#Deleted in new
chr14	106506995	106507491	chr14:106506995-106507491	3	-	106506995	106507433	789624	2	307,104,	0,392,
#Deleted in new
chr14	106511116	106511856	chr14:106511116-106511856	3	-	106511116	106511552	789624	2	305,350,	0,390,
#Partially deleted in new
chr14	106515817	106515854	chr14:106515817-106515854	7	-	106515817	106515817	16724991	1	37,	0,
#Deleted in new
chr14	106518581	106519027	chr14:106518581-106519027	7	-	106518581	106518581	16724991	2	293,42,	0,404,
#Deleted in new
chr14	106531140	106531471	chr14:106531140-106531471	7	-	106531140	106531140	16724991	1	331,	0,
#Deleted in new
chr14	106537809	106538344	chr14:106537809-106538344	3	-	106537809	106538265	789624	2	307,125,	0,410,
#Partially deleted in new
chr14	106556935	106557477	chr14:106556935-106557477	3	-	106556935	106557397	789624	2	313,126,	0,416,
#Deleted in new
chr14	106564374	106564598	chr14:106564374-106564598	7	-	106564374	106564374	16724991	1	224,	0,
#Deleted in new
chr14	106566116	106566555	chr14:106566116-106566555	7	-	106566116	106566116	16724991	2	271,46,	0,393,
#Deleted in new
chr14	106578743	106579236	chr14:106578743-106579236	3	-	106578743	106579177	789624	2	305,105,	0,388,
#Deleted in new
chr14	106583505	106583807	chr14:106583505-106583807	7	-	106583505	106583505	16724991	1	302,	0,
#Deleted in new
chr14	106584717	106584976	chr14:106584717-106584976	7	-	106584717	106584717	16724991	1	259,	0,
#Deleted in new
chr14	106586375	106586826	chr14:106586375-106586826	7	-	106586375	106586375	16724991	2	307,46,	0,405,
#Deleted in new
chr14	106592675	106593347	chr14:106592675-106593347	3	-	106592675	106593126	789624	2	304,267,	0,405,
#Deleted in new
chr14	106599669	106599924	chr14:106599669-106599924	7	-	106599669	106599669	16724991	1	255,	0,
#Deleted in new
chr14	106601345	106601792	chr14:106601345-106601792	7	-	106601345	106601345	16724991	2	307,46,	0,401,
#Deleted in new
chr14	106606100	106606551	chr14:106606100-106606551	7	-	106606100	106606100	16724991	2	322,46,	0,405,
#Deleted in new
chr14	106609761	106610196	chr14:106609761-106610196	7	-	106609761	106609761	16724991	2	305,46,	0,389,
#Deleted in new
chr14	106618893	106619173	chr14:106618893-106619173	7	-	106618893	106618893	16724991	1	280,	0,
#Deleted in new
chr14	106622356	106622855	chr14:106622356-106622855	3	-	106622356	106622794	789624	2	307,107,	0,392,
#Deleted in new
chr14	106627248	106627825	chr14:106627248-106627825	3	-	106627248	106627680	0	2	304,191,	0,386,
#Deleted in new
chr14	106631196	106631653	chr14:106631196-106631653	7	-	106631196	106631196	16724991	2	308,46,	0,411,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr14	106636671	106636786	chr14:106636671-106636786	7	+	106636671	106636671	16724991	1	115,	0,
#Deleted in new
chr14	106637717	106637973	chr14:106637717-106637973	7	-	106637717	106637717	16724991	1	256,	0,
#Deleted in new
chr14	106639118	106639657	chr14:106639118-106639657	3	-	106639118	106639556	789624	2	310,147,	0,392,
#Deleted in new
chr14	106643141	106643585	chr14:106643141-106643585	7	-	106643141	106643141	16724991	2	295,45,	0,399,
#Deleted in new
chr14	106650550	106650785	chr14:106650550-106650785	7	-	106650550	106650550	16724991	1	235,	0,
#Deleted in new
chr14	106652236	106652681	chr14:106652236-106652681	7	-	106652236	106652236	16724991	2	295,46,	0,399,
#Deleted in new
chr14	106657724	106658258	chr14:106657724-106658258	3	-	106657724	106658181	789624	2	305,126,	0,408,
#Deleted in new
chr14	106666091	106666532	chr14:106666091-106666532	7	-	106666091	106666091	16724991	2	299,42,	0,399,
#Deleted in new
chr14	106671771	106672073	chr14:106671771-106672073	7	-	106671771	106671771	16724991	1	302,	0,
#Deleted in new
chr14	106675016	106675544	chr14:106675016-106675544	3	-	106675016	106675465	789624	2	302,125,	0,403,
#Deleted in new
chr14	106680602	106681042	chr14:106680602-106681042	7	-	106680602	106680602	16724991	2	311,46,	0,394,
#Deleted in new
chr14	106683394	106684350	chr14:106683394-106684350	7	-	106683394	106683394	16724991	1	956,	0,
#Deleted in new
chr14	106686516	106686562	chr14:106686516-106686562	7	-	106686516	106686516	16724991	1	46,	0,
#Deleted in new
chr14	106687112	106687200	chr14:106687112-106687200	7	-	106687112	106687112	16724991	1	88,	0,
#Deleted in new
chr14	106692656	106692888	chr14:106692656-106692888	7	-	106692656	106692656	16724991	1	232,	0,
#Deleted in new
chr14	106695101	106695397	chr14:106695101-106695397	7	-	106695101	106695101	16724991	1	296,	0,
#Deleted in new
chr14	106703845	106704286	chr14:106703845-106704286	7	-	106703845	106703845	16724991	2	307,45,	0,396,
#Deleted in new
chr14	106714683	106715181	chr14:106714683-106715181	3	-	106714683	106715120	789624	2	305,107,	0,391,
#Deleted in new
chr14	106723573	106724093	chr14:106723573-106724093	3	-	106723573	106724017	789624	2	312,122,	0,398,
#Deleted in new
chr14	106728162	106728615	chr14:106728162-106728615	7	-	106728162	106728162	16724991	2	304,46,	0,407,
#Deleted in new
chr14	106737109	106737547	chr14:106737109-106737547	3	-	106737109	106737547	789624	2	307,46,	0,392,
#Deleted in new
chr14	106750288	106750594	chr14:106750288-106750594	7	-	106750288	106750288	16724991	1	306,	0,
#Deleted in new
chr14	106762091	106762588	chr14:106762091-106762588	3	-	106762091	106762530	789624	2	307,104,	0,393,
#Deleted in new
chr14	106770576	106771020	chr14:106770576-106771020	3	-	106770576	106771020	789624	2	312,46,	0,398,
#Deleted in new
chr14	106775156	106775618	chr14:106775156-106775618	7	-	106775156	106775156	16724991	2	313,46,	0,416,
#Partially deleted in new
chr14	106790690	106790993	chr14:106790690-106790993	3	-	106790690	106790993	8553170	1	303,	0,
#Partially deleted in new
chr14	106790693	106791233	chr14:106790693-106791233	0	-	106790693	106791153	789624	2	311,126,	0,414,
#Partially deleted in new
chr14	106802693	106803233	chr14:106802693-106803233	3	-	106802693	106803153	789624	2	311,126,	0,414,
#Partially deleted in new
chr14	106810441	106811131	chr14:106810441-106811131	3	-	106810441	106810895	789624	2	305,282,	0,408,
#Deleted in new
chr14	106821173	106821414	chr14:106821173-106821414	7	-	106821173	106821173	16724991	1	241,	0,
#Deleted in new
chr14	106823686	106824147	chr14:106823686-106824147	7	-	106823686	106823686	16724991	2	313,45,	0,416,
#Deleted in new
chr14	106827868	106828163	chr14:106827868-106828163	7	-	106827868	106827868	16724991	1	295,	0,
#Deleted in new
chr14	106831766	106832052	chr14:106831766-106832052	7	-	106831766	106831766	16724991	1	286,	0,
#Deleted in new
chr14	106850884	106850999	chr14:106850884-106850999	3	-	106850884	106850884	5263520	1	115,	0,
#Deleted in new
chr14	106851122	106851417	chr14:106851122-106851417	7	-	106851122	106851122	16724991	1	295,	0,
#Deleted in new
chr14	106865626	106865895	chr14:106865626-106865895	7	-	106865626	106865626	16724991	1	269,	0,
#Deleted in new
chr14	106867659	106868092	chr14:106867659-106868092	7	-	106867659	106867659	16724991	2	296,45,	0,388,
#Deleted in new
chr14	106872782	106873186	chr14:106872782-106873186	7	-	106872782	106872782	16724991	2	275,46,	0,358,
#Deleted in new
chr14	106874582	106875071	chr14:106874582-106875071	3	-	106874582	106875017	789624	2	305,100,	0,389,
#Deleted in new
chr14	106879562	106879812	chr14:106879562-106879812	7	-	106879562	106879562	16724991	1	250,	0,
#Deleted in new
chr14_GL000009v2_random	56139	58376	chr14_GL000009v2_random:56139-58376	3	-	58080	58308	8553170	1	2237,	0,
#Deleted in new
chr14_GL000194v1_random	53589	115018	chr14_GL000194v1_random:53589-115018	3	-	53646	54021	789624	3	2087,59,33,	0,59202,61396,
#Deleted in new
chr14_GL000194v1_random	53593	115055	chr14_GL000194v1_random:53593-115055	3	-	54730	112848	789624	4	1239,231,59,70,	0,1852,59198,61392,
#Deleted in new
chr14_GL000225v1_random	183251	183364	chr14_GL000225v1_random:183251-183364	3	+	183251	183251	8553170	1	113,	0,
#Deleted in new
chr14_KI270726v1_random	26240	26534	chr14_KI270726v1_random:26240-26534	3	+	26240	26534	8553170	1	294,	0,
#Deleted in new
chr14_KI270726v1_random	41443	41876	chr14_KI270726v1_random:41443-41876	3	+	41443	41876	789624	2	46,305,	0,128,
#Deleted in new
chr14_KI270844v1_alt	18545	18639	chr14_KI270844v1_alt:18545-18639	7	+	18545	18545	16724991	1	94,	0,
#Deleted in new
chr14_KI270844v1_alt	36579	39407	chr14_KI270844v1_alt:36579-39407	3	-	36579	36579	8553170	1	2828,	0,
#Deleted in new
chr14_KI270844v1_alt	37463	39407	chr14_KI270844v1_alt:37463-39407	0	-	37463	37463	8553170	1	1944,	0,
#Deleted in new
chr14_KI270844v1_alt	44831	137725	chr14_KI270844v1_alt:44831-137725	0	-	106958	137725	789624	13	412,75,101,136,111,111,198,140,330,188,155,155,117,	0,6506,7282,8838,11196,27598,29783,36900,40903,44119,59388,62059,92777,
#Deleted in new
chr14_KI270844v1_alt	44909	199881	chr14_KI270844v1_alt:44909-199881	3	-	45024	197274	789624	27	334,75,101,136,111,111,198,140,330,188,155,155,145,159,150,47,67,33,119,96,150,96,61,141,89,79,157,	0,6428,7204,8760,11118,27520,29705,36822,40825,44041,59310,61981,82722,92699,95752,97061,106762,114408,116011,116269,127437,131026,142303,145934,147965,152286,154815,
#Deleted in new
chr14_KI270844v1_alt	53714	56688	chr14_KI270844v1_alt:53714-56688	0	-	53714	53714	8553170	2	91,661,	0,2313,
#Deleted in new
chr14_KI270844v1_alt	67308	67569	chr14_KI270844v1_alt:67308-67569	7	-	67308	67308	16724991	1	261,	0,
#Deleted in new
chr14_KI270844v1_alt	68537	69455	chr14_KI270844v1_alt:68537-69455	7	-	68537	68537	16724991	1	918,	0,
#Deleted in new
chr14_KI270844v1_alt	103318	114030	chr14_KI270844v1_alt:103318-114030	0	-	103318	103318	8553170	3	1056,155,99,	0,3572,10613,
#Deleted in new
chr14_KI270844v1_alt	172369	199854	chr14_KI270844v1_alt:172369-199854	0	-	172369	197274	789624	6	127,96,61,89,79,130,	0,3566,14843,20505,24826,27355,
#Deleted in new
chr14_KI270844v1_alt	176905	178412	chr14_KI270844v1_alt:176905-178412	7	+	176905	176905	16724991	2	299,886,	0,621,
#Deleted in new
chr14_KI270844v1_alt	182709	182925	chr14_KI270844v1_alt:182709-182925	3	-	182709	182709	8553170	1	216,	0,
#Deleted in new
chr14_KI270844v1_alt	190852	248502	chr14_KI270844v1_alt:190852-248502	0	-	190852	197274	789624	4	132,89,79,132,	0,2022,6343,57518,
#Deleted in new
chr14_KI270844v1_alt	190930	248483	chr14_KI270844v1_alt:190930-248483	0	-	190930	197274	789624	5	54,89,79,156,113,	0,1944,6265,13558,57440,
#Deleted in new
chr14_KI270844v1_alt	190931	248483	chr14_KI270844v1_alt:190931-248483	0	-	190931	197274	789624	5	53,89,79,96,113,	0,1943,6264,55838,57439,
#Deleted in new
chr14_KI270844v1_alt	220650	227593	chr14_KI270844v1_alt:220650-227593	3	-	220650	220650	8553170	1	6943,	0,
#Deleted in new
chr14_KI270844v1_alt	247545	281620	chr14_KI270844v1_alt:247545-281620	1	-	250894	281564	789624	11	3460,200,115,192,117,101,76,92,168,234,123,	0,5411,7762,12616,18034,18548,19238,20530,22503,32561,33952,
#Deleted in new
chr14_KI270844v1_alt	247973	304235	chr14_KI270844v1_alt:247973-304235	3	-	250894	281564	789624	12	3032,200,115,192,117,101,76,92,168,234,123,258,	0,4983,7334,12188,17606,18120,18810,20102,22075,32133,33524,56004,
#Deleted in new
chr14_KI270844v1_alt	248749	304242	chr14_KI270844v1_alt:248749-304242	1	-	250894	281564	789624	12	2256,200,115,192,117,101,76,92,168,234,123,77,	0,4207,6558,11412,16830,17344,18034,19326,21299,31357,32748,55416,
#Deleted in new
chr14_KI270844v1_alt	250617	304321	chr14_KI270844v1_alt:250617-304321	1	-	250894	281564	789624	11	388,200,115,117,101,76,92,168,234,123,156,	0,2339,4690,14962,15476,16166,17458,19431,29489,30880,53548,
#Deleted in new
chr14_KI270844v1_alt	250721	266793	chr14_KI270844v1_alt:250721-266793	0	-	250894	266793	789624	6	284,200,115,192,101,10,	0,2235,4586,9440,15372,16062,
#Deleted in new
chr14_KI270844v1_alt	279810	281623	chr14_KI270844v1_alt:279810-281623	0	-	279810	279810	8553170	2	530,126,	0,1687,
#Deleted in new
chr14_KI270845v1_alt	25360	162582	chr14_KI270845v1_alt:25360-162582	0	-	25360	162564	789624	4	46,79,138,323,	0,127627,129452,136899,
#Deleted in new
chr14_KI270845v1_alt	137506	148338	chr14_KI270845v1_alt:137506-148338	3	+	144253	146606	789624	5	320,127,130,36,1938,	0,6731,8065,8590,8894,
#Deleted in new
chr14_KI270845v1_alt	137586	147366	chr14_KI270845v1_alt:137586-147366	1	+	144253	146701	789624	5	240,127,130,36,922,	0,6651,7985,8510,8858,
#Deleted in new
chr14_KI270845v1_alt	138963	147631	chr14_KI270845v1_alt:138963-147631	1	+	144253	146606	789624	5	485,127,130,36,1231,	0,5274,6608,7133,7437,
#Deleted in new
chr14_KI270845v1_alt	146843	147670	chr14_KI270845v1_alt:146843-147670	3	-	146843	146843	8553170	2	320,223,	0,604,
#Deleted in new
chr14_KI270845v1_alt	148686	151384	chr14_KI270845v1_alt:148686-151384	0	-	149266	151384	789624	2	586,229,	0,2469,
#Deleted in new
chr14_KI270845v1_alt	148687	150332	chr14_KI270845v1_alt:148687-150332	1	-	149452	150001	789624	1	1645,	0,
#Deleted in new
chr14_KI270845v1_alt	150815	162806	chr14_KI270845v1_alt:150815-162806	3	-	151301	162564	789624	4	666,79,138,547,	0,2172,3997,11444,
#Deleted in new
chr14_KI270845v1_alt	151902	163470	chr14_KI270845v1_alt:151902-163470	1	-	152915	162564	789624	3	1164,138,1211,	0,2910,10357,
#Deleted in new
chr14_KI270845v1_alt	152104	162564	chr14_KI270845v1_alt:152104-162564	1	-	152104	162564	789624	4	114,79,138,305,	0,883,2708,10155,
#Deleted in new
chr14_KI270846v1_alt	3858	4237	chr14_KI270846v1_alt:3858-4237	7	-	3858	3858	16724991	1	379,	0,
#Deleted in new
chr14_KI270846v1_alt	13607	16692	chr14_KI270846v1_alt:13607-16692	7	-	13607	13607	16724991	2	1043,181,	0,2904,
#Deleted in new
chr14_KI270846v1_alt	55244	56751	chr14_KI270846v1_alt:55244-56751	3	-	55292	56751	789624	3	443,321,307,	0,665,1200,
#Deleted in new
chr14_KI270846v1_alt	67714	69502	chr14_KI270846v1_alt:67714-69502	3	-	67839	69502	0	4	457,324,321,310,	0,540,950,1478,
#Deleted in new
chr14_KI270846v1_alt	92109	93835	chr14_KI270846v1_alt:92109-93835	3	-	92244	93835	0	4	458,330,36,295,	0,555,1003,1431,
#Deleted in new
chr14_KI270846v1_alt	110838	112559	chr14_KI270846v1_alt:110838-112559	3	-	110971	112559	0	4	456,327,36,295,	0,553,998,1426,
#Deleted in new
chr14_KI270846v1_alt	115692	116826	chr14_KI270846v1_alt:115692-116826	3	-	115692	115692	8553170	3	107,142,299,	0,402,835,
#Deleted in new
chr14_KI270846v1_alt	132401	137612	chr14_KI270846v1_alt:132401-137612	7	-	132401	132401	16724991	6	77,131,313,330,35,293,	0,2203,3620,4030,4478,4918,
#Deleted in new
chr14_KI270846v1_alt	140076	141083	chr14_KI270846v1_alt:140076-141083	7	-	140076	140076	16724991	1	1007,	0,
#Deleted in new
chr14_KI270846v1_alt	171729	172371	chr14_KI270846v1_alt:171729-172371	3	-	171729	171729	8553170	2	126,236,	0,406,
#Deleted in new
chr14_KI270846v1_alt	174886	176434	chr14_KI270846v1_alt:174886-176434	3	-	174936	176434	0	3	445,360,307,	0,667,1241,
#Deleted in new
chr14_KI270846v1_alt	189562	190296	chr14_KI270846v1_alt:189562-190296	7	-	189562	189562	16724991	2	332,319,	0,415,
#Deleted in new
chr14_KI270846v1_alt	204111	210840	chr14_KI270846v1_alt:204111-210840	3	-	205530	210840	789624	6	1503,131,315,330,45,295,	0,3720,5138,5550,5998,6434,
#Deleted in new
chr14_KI270846v1_alt	209106	210840	chr14_KI270846v1_alt:209106-210840	0	-	209241	210840	0	4	458,330,45,295,	0,555,1003,1439,
#Deleted in new
chr14_KI270846v1_alt	209107	210840	chr14_KI270846v1_alt:209107-210840	0	-	209241	210840	789624	5	457,67,158,45,295,	0,554,726,1002,1438,
#Deleted in new
chr14_KI270846v1_alt	236872	239174	chr14_KI270846v1_alt:236872-239174	3	-	237005	239174	8553170	7	456,330,45,45,45,51,294,	0,553,1001,1189,1377,1565,2008,
#Deleted in new
chr14_KI270846v1_alt	253273	253600	chr14_KI270846v1_alt:253273-253600	7	-	253273	253273	16724991	1	327,	0,
#Deleted in new
chr14_KI270846v1_alt	304533	313446	chr14_KI270846v1_alt:304533-313446	3	-	304919	313446	789624	7	395,158,324,324,72,102,303,	0,679,3602,4136,5196,8060,8610,
#Deleted in new
chr14_KI270846v1_alt	321988	323987	chr14_KI270846v1_alt:321988-323987	3	-	322111	323987	0	4	518,318,336,313,	0,697,1260,1686,
#Deleted in new
chr14_KI270846v1_alt	330966	331029	chr14_KI270846v1_alt:330966-331029	3	-	330966	331029	789624	1	63,	0,
#Deleted in new
chr14_KI270846v1_alt	331184	331234	chr14_KI270846v1_alt:331184-331234	7	-	331184	331184	16724991	1	50,	0,
#Deleted in new
chr14_KI270846v1_alt	331582	331633	chr14_KI270846v1_alt:331582-331633	3	-	331582	331633	789624	1	51,	0,
#Deleted in new
chr14_KI270846v1_alt	331983	332031	chr14_KI270846v1_alt:331983-332031	3	-	331983	332031	789624	1	48,	0,
#Deleted in new
chr14_KI270846v1_alt	332355	332405	chr14_KI270846v1_alt:332355-332405	3	-	332355	332405	789624	1	50,	0,
#Deleted in new
chr14_KI270846v1_alt	332561	332621	chr14_KI270846v1_alt:332561-332621	7	-	332561	332561	16724991	1	60,	0,
#Deleted in new
chr14_KI270846v1_alt	332967	333020	chr14_KI270846v1_alt:332967-333020	3	-	332967	333020	789624	1	53,	0,
#Deleted in new
chr14_KI270846v1_alt	333175	333227	chr14_KI270846v1_alt:333175-333227	3	-	333175	333227	789624	1	52,	0,
#Deleted in new
chr14_KI270846v1_alt	333319	333330	chr14_KI270846v1_alt:333319-333330	3	-	333319	333330	8553170	1	11,	0,
#Deleted in new
chr14_KI270846v1_alt	333392	333447	chr14_KI270846v1_alt:333392-333447	7	-	333392	333392	16724991	1	55,	0,
#Deleted in new
chr14_KI270846v1_alt	348802	348822	chr14_KI270846v1_alt:348802-348822	3	-	348802	348822	8553170	1	20,	0,
#Deleted in new
chr14_KI270846v1_alt	349307	349325	chr14_KI270846v1_alt:349307-349325	3	-	349307	349325	8553170	1	18,	0,
#Deleted in new
chr14_KI270846v1_alt	351671	351691	chr14_KI270846v1_alt:351671-351691	3	-	351671	351691	8553170	1	20,	0,
#Deleted in new
chr14_KI270846v1_alt	352638	352657	chr14_KI270846v1_alt:352638-352657	3	-	352638	352657	8553170	1	19,	0,
#Deleted in new
chr14_KI270846v1_alt	353799	353830	chr14_KI270846v1_alt:353799-353830	3	-	353799	353830	8553170	1	31,	0,
#Deleted in new
chr14_KI270846v1_alt	356319	356347	chr14_KI270846v1_alt:356319-356347	3	-	356319	356347	8553170	1	28,	0,
#Deleted in new
chr14_KI270846v1_alt	357852	363878	chr14_KI270846v1_alt:357852-363878	0	+	357852	357852	8553170	2	114,127,	0,5899,
#Deleted in new
chr14_KI270846v1_alt	358959	358976	chr14_KI270846v1_alt:358959-358976	3	-	358959	358976	8553170	1	17,	0,
#Deleted in new
chr14_KI270846v1_alt	359467	359488	chr14_KI270846v1_alt:359467-359488	3	-	359467	359488	789624	1	21,	0,
#Deleted in new
chr14_KI270846v1_alt	361310	361330	chr14_KI270846v1_alt:361310-361330	3	-	361310	361330	8553170	1	20,	0,
#Deleted in new
chr14_KI270846v1_alt	362276	362292	chr14_KI270846v1_alt:362276-362292	3	-	362276	362292	8553170	1	16,	0,
#Deleted in new
chr14_KI270846v1_alt	362414	364346	chr14_KI270846v1_alt:362414-364346	3	+	362414	362414	8553170	4	36,106,126,102,	0,247,1337,1830,
#Deleted in new
chr14_KI270846v1_alt	363402	363439	chr14_KI270846v1_alt:363402-363439	3	-	363402	363439	8553170	1	37,	0,
#Deleted in new
chr14_KI270846v1_alt	365725	365756	chr14_KI270846v1_alt:365725-365756	3	-	365725	365756	8553170	1	31,	0,
#Deleted in new
chr14_KI270846v1_alt	368406	368423	chr14_KI270846v1_alt:368406-368423	3	-	368406	368423	8553170	1	17,	0,
#Deleted in new
chr14_KI270846v1_alt	368910	368931	chr14_KI270846v1_alt:368910-368931	3	-	368910	368931	789624	1	21,	0,
#Deleted in new
chr14_KI270846v1_alt	370417	370440	chr14_KI270846v1_alt:370417-370440	3	-	370417	370440	789624	1	23,	0,
#Deleted in new
chr14_KI270846v1_alt	371384	371400	chr14_KI270846v1_alt:371384-371400	3	-	371384	371400	8553170	1	16,	0,
#Deleted in new
chr14_KI270846v1_alt	372265	372296	chr14_KI270846v1_alt:372265-372296	3	-	372266	372296	789624	1	31,	0,
#Deleted in new
chr14_KI270846v1_alt	372449	372480	chr14_KI270846v1_alt:372449-372480	3	-	372450	372480	789624	1	31,	0,
#Deleted in new
chr14_KI270846v1_alt	374979	375010	chr14_KI270846v1_alt:374979-375010	3	-	374979	375010	8553170	1	31,	0,
#Deleted in new
chr14_KI270846v1_alt	377675	377692	chr14_KI270846v1_alt:377675-377692	3	-	377675	377692	8553170	1	17,	0,
#Deleted in new
chr14_KI270846v1_alt	378178	378196	chr14_KI270846v1_alt:378178-378196	3	-	378178	378196	8553170	1	18,	0,
#Deleted in new
chr14_KI270846v1_alt	380025	380045	chr14_KI270846v1_alt:380025-380045	3	-	380025	380045	8553170	1	20,	0,
#Deleted in new
chr14_KI270846v1_alt	380990	381006	chr14_KI270846v1_alt:380990-381006	3	-	380990	381006	8553170	1	16,	0,
#Deleted in new
chr14_KI270846v1_alt	382127	382158	chr14_KI270846v1_alt:382127-382158	3	-	382127	382158	789624	1	31,	0,
#Deleted in new
chr14_KI270846v1_alt	384594	384625	chr14_KI270846v1_alt:384594-384625	3	-	384594	384625	8553170	1	31,	0,
#Deleted in new
chr14_KI270846v1_alt	385747	400411	chr14_KI270846v1_alt:385747-400411	3	+	385747	385747	789624	6	839,109,146,103,108,8307,	0,3171,4220,4562,5036,6357,
#Deleted in new
chr14_KI270846v1_alt	386204	390435	chr14_KI270846v1_alt:386204-390435	0	+	386204	386204	8553170	4	79,186,142,126,	0,2627,3767,4105,
#Deleted in new
chr14_KI270846v1_alt	386206	390441	chr14_KI270846v1_alt:386206-390441	0	+	386206	386206	8553170	4	77,196,146,132,	0,2625,3761,4103,
#Deleted in new
chr14_KI270846v1_alt	387270	387287	chr14_KI270846v1_alt:387270-387287	3	-	387270	387287	789624	1	17,	0,
#Deleted in new
chr14_KI270846v1_alt	388861	390408	chr14_KI270846v1_alt:388861-390408	0	+	388861	388861	8553170	3	166,146,99,	0,1106,1448,
#Deleted in new
chr14_KI270846v1_alt	389256	390441	chr14_KI270846v1_alt:389256-390441	0	+	389256	389256	8553170	3	75,146,132,	0,711,1053,
#Deleted in new
chr14_KI270846v1_alt	389886	390441	chr14_KI270846v1_alt:389886-390441	0	+	389886	389886	8553170	2	227,132,	0,423,
#Deleted in new
chr14_KI270846v1_alt	407522	408022	chr14_KI270846v1_alt:407522-408022	3	-	407522	407970	789624	2	316,101,	0,399,
#Deleted in new
chr14_KI270846v1_alt	412978	413158	chr14_KI270846v1_alt:412978-413158	7	-	412978	412978	16724991	1	180,	0,
#Deleted in new
chr14_KI270846v1_alt	437497	440038	chr14_KI270846v1_alt:437497-440038	7	-	437497	437497	16724991	2	1266,577,	0,1964,
#Deleted in new
chr14_KI270846v1_alt	437936	438935	chr14_KI270846v1_alt:437936-438935	5	-	437936	437936	16724991	1	999,	0,
#Deleted in new
chr14_KI270846v1_alt	446288	446915	chr14_KI270846v1_alt:446288-446915	7	-	446288	446288	16724991	1	627,	0,
#Deleted in new
chr14_KI270846v1_alt	454350	454852	chr14_KI270846v1_alt:454350-454852	3	-	454350	454788	0	2	307,110,	0,392,
#Deleted in new
chr14_KI270846v1_alt	469302	469593	chr14_KI270846v1_alt:469302-469593	7	-	469302	469302	16724991	1	291,	0,
#Deleted in new
chr14_KI270846v1_alt	472863	473343	chr14_KI270846v1_alt:472863-473343	3	-	472863	473301	789624	2	307,88,	0,392,
#Deleted in new
chr14_KI270846v1_alt	479690	480189	chr14_KI270846v1_alt:479690-480189	3	-	479690	480125	789624	2	307,110,	0,389,
#Deleted in new
chr14_KI270846v1_alt	492913	493399	chr14_KI270846v1_alt:492913-493399	3	-	492913	493350	8553170	2	307,95,	0,391,
#Deleted in new
chr14_KI270846v1_alt	505670	506134	chr14_KI270846v1_alt:505670-506134	3	-	505670	506114	789624	2	312,66,	0,398,
#Deleted in new
chr14_KI270846v1_alt	507434	507533	chr14_KI270846v1_alt:507434-507533	7	-	507434	507434	16724991	1	99,	0,
#Deleted in new
chr14_KI270846v1_alt	513368	513629	chr14_KI270846v1_alt:513368-513629	7	-	513368	513368	16724991	1	261,	0,
#Deleted in new
chr14_KI270846v1_alt	523317	523767	chr14_KI270846v1_alt:523317-523767	7	-	523317	523317	16724991	2	301,46,	0,404,
#Deleted in new
chr14_KI270846v1_alt	529917	530452	chr14_KI270846v1_alt:529917-530452	3	-	529917	530373	0	2	307,125,	0,410,
#Deleted in new
chr14_KI270846v1_alt	555890	556342	chr14_KI270846v1_alt:555890-556342	3	-	555890	556342	8553170	2	307,46,	0,406,
#Deleted in new
chr14_KI270846v1_alt	575740	576176	chr14_KI270846v1_alt:575740-576176	3	-	575740	576176	8553170	2	307,46,	0,390,
#Deleted in new
chr14_KI270846v1_alt	584403	584973	chr14_KI270846v1_alt:584403-584973	3	-	584403	584853	789624	2	307,166,	0,404,
#Deleted in new
chr14_KI270846v1_alt	587975	588242	chr14_KI270846v1_alt:587975-588242	7	-	587975	587975	16724991	1	267,	0,
#Deleted in new
chr14_KI270846v1_alt	590188	590478	chr14_KI270846v1_alt:590188-590478	7	-	590188	590188	16724991	2	159,46,	0,244,
#Deleted in new
chr14_KI270846v1_alt	597308	597841	chr14_KI270846v1_alt:597308-597841	3	-	597308	597761	789624	2	304,126,	0,407,
#Deleted in new
chr14_KI270846v1_alt	610055	610346	chr14_KI270846v1_alt:610055-610346	7	-	610055	610055	16724991	1	291,	0,
#Deleted in new
chr14_KI270846v1_alt	613659	613900	chr14_KI270846v1_alt:613659-613900	7	-	613659	613659	16724991	1	241,	0,
#Deleted in new
chr14_KI270846v1_alt	621390	621932	chr14_KI270846v1_alt:621390-621932	3	-	621390	621852	789624	2	313,126,	0,416,
#Deleted in new
chr14_KI270846v1_alt	631351	631571	chr14_KI270846v1_alt:631351-631571	7	-	631351	631351	16724991	1	220,	0,
#Deleted in new
chr14_KI270846v1_alt	632973	633499	chr14_KI270846v1_alt:632973-633499	3	-	632973	633425	789624	2	305,120,	0,406,
#Deleted in new
chr14_KI270846v1_alt	642110	642529	chr14_KI270846v1_alt:642110-642529	7	-	642110	642110	16724991	2	306,28,	0,391,
#Deleted in new
chr14_KI270846v1_alt	647322	648288	chr14_KI270846v1_alt:647322-648288	7	-	647322	647322	16724991	1	966,	0,
#Deleted in new
chr14_KI270846v1_alt	652667	653163	chr14_KI270846v1_alt:652667-653163	3	-	652667	653104	789624	2	307,105,	0,391,
#Deleted in new
chr14_KI270846v1_alt	664468	664759	chr14_KI270846v1_alt:664468-664759	7	-	664468	664468	16724991	1	291,	0,
#Deleted in new
chr14_KI270846v1_alt	674371	676340	chr14_KI270846v1_alt:674371-676340	3	+	674371	674371	8553170	2	122,267,	0,1702,
#Deleted in new
chr14_KI270846v1_alt	678704	679222	chr14_KI270846v1_alt:678704-679222	3	-	678704	679160	789624	2	307,108,	0,410,
#Deleted in new
chr14_KI270846v1_alt	702830	703363	chr14_KI270846v1_alt:702830-703363	3	-	702830	703284	0	2	307,125,	0,408,
#Deleted in new
chr14_KI270846v1_alt	725530	725992	chr14_KI270846v1_alt:725530-725992	7	-	725530	725530	16724991	2	313,46,	0,416,
#Deleted in new
chr14_KI270846v1_alt	731130	731395	chr14_KI270846v1_alt:731130-731395	7	-	731130	731130	16724991	1	265,	0,
#Deleted in new
chr14_KI270846v1_alt	732456	732484	chr14_KI270846v1_alt:732456-732484	7	-	732456	732456	16724991	1	28,	0,
#Deleted in new
chr14_KI270846v1_alt	736374	736909	chr14_KI270846v1_alt:736374-736909	3	-	736374	736830	0	2	307,125,	0,410,
#Deleted in new
chr14_KI270846v1_alt	744314	744812	chr14_KI270846v1_alt:744314-744812	3	-	744314	744752	789624	2	307,106,	0,392,
#Deleted in new
chr14_KI270846v1_alt	754579	755426	chr14_KI270846v1_alt:754579-755426	7	-	754579	754579	16724991	1	847,	0,
#Deleted in new
chr14_KI270846v1_alt	756797	757248	chr14_KI270846v1_alt:756797-757248	7	-	756797	756797	16724991	2	304,47,	0,404,
#Deleted in new
chr14_KI270846v1_alt	761336	761577	chr14_KI270846v1_alt:761336-761577	7	-	761336	761336	16724991	1	241,	0,
#Deleted in new
chr14_KI270846v1_alt	769163	769631	chr14_KI270846v1_alt:769163-769631	3	-	769163	769607	789624	2	312,70,	0,398,
#Deleted in new
chr14_KI270846v1_alt	777185	777435	chr14_KI270846v1_alt:777185-777435	7	-	777185	777185	16724991	1	250,	0,
#Deleted in new
chr14_KI270846v1_alt	782419	782744	chr14_KI270846v1_alt:782419-782744	7	-	782419	782419	16724991	1	325,	0,
#Deleted in new
chr14_KI270846v1_alt	785591	786005	chr14_KI270846v1_alt:785591-786005	7	-	785591	785591	16724991	2	284,46,	0,368,
#Deleted in new
chr14_KI270846v1_alt	792022	792529	chr14_KI270846v1_alt:792022-792529	3	-	792022	792457	789624	2	307,118,	0,389,
#Deleted in new
chr14_KI270846v1_alt	798884	799321	chr14_KI270846v1_alt:798884-799321	7	-	798884	798884	16724991	2	299,35,	0,402,
#Deleted in new
chr14_KI270846v1_alt	802850	803382	chr14_KI270846v1_alt:802850-803382	3	-	802850	803302	789624	2	305,126,	0,406,
#Deleted in new
chr14_KI270846v1_alt	810492	810724	chr14_KI270846v1_alt:810492-810724	7	-	810492	810492	16724991	1	232,	0,
#Deleted in new
chr14_KI270846v1_alt	812163	812602	chr14_KI270846v1_alt:812163-812602	7	-	812163	812163	16724991	2	299,46,	0,393,
#Deleted in new
chr14_KI270846v1_alt	817051	817524	chr14_KI270846v1_alt:817051-817524	3	-	817051	817489	789624	2	310,81,	0,392,
#Deleted in new
chr14_KI270846v1_alt	822440	822477	chr14_KI270846v1_alt:822440-822477	7	-	822440	822440	16724991	1	37,	0,
#Deleted in new
chr14_KI270846v1_alt	823979	824407	chr14_KI270846v1_alt:823979-824407	7	-	823979	823979	16724991	2	289,36,	0,392,
#Deleted in new
chr14_KI270846v1_alt	826781	827302	chr14_KI270846v1_alt:826781-827302	3	-	826781	827235	789624	2	307,113,	0,408,
#Deleted in new
chr14_KI270846v1_alt	836088	836526	chr14_KI270846v1_alt:836088-836526	7	-	836088	836088	16724991	2	298,46,	0,392,
#Deleted in new
chr14_KI270846v1_alt	840987	841418	chr14_KI270846v1_alt:840987-841418	3	-	840987	841418	789624	2	303,46,	0,385,
#Deleted in new
chr14_KI270846v1_alt	847818	848285	chr14_KI270846v1_alt:847818-848285	7	-	847818	847818	16724991	2	318,46,	0,421,
#Deleted in new
chr14_KI270846v1_alt	851469	851923	chr14_KI270846v1_alt:851469-851923	3	-	851469	851923	789624	2	307,46,	0,408,
#Deleted in new
chr14_KI270846v1_alt	859063	859343	chr14_KI270846v1_alt:859063-859343	7	-	859063	859063	16724991	1	280,	0,
#Deleted in new
chr14_KI270846v1_alt	860785	861225	chr14_KI270846v1_alt:860785-861225	7	-	860785	860785	16724991	2	300,46,	0,394,
#Deleted in new
chr14_KI270846v1_alt	865339	865824	chr14_KI270846v1_alt:865339-865824	3	-	865339	865793	789624	2	304,98,	0,387,
#Deleted in new
chr14_KI270846v1_alt	868978	869412	chr14_KI270846v1_alt:868978-869412	7	-	868978	868978	16724991	2	304,46,	0,388,
#Deleted in new
chr14_KI270846v1_alt	881068	881537	chr14_KI270846v1_alt:881068-881537	3	-	881068	881522	789624	2	307,61,	0,408,
#Deleted in new
chr14_KI270846v1_alt	884452	884910	chr14_KI270846v1_alt:884452-884910	7	-	884452	884452	16724991	2	355,46,	0,412,
#Deleted in new
chr14_KI270846v1_alt	888354	888793	chr14_KI270846v1_alt:888354-888793	7	-	888354	888354	16724991	2	294,46,	0,393,
#Deleted in new
chr14_KI270846v1_alt	902170	902700	chr14_KI270846v1_alt:902170-902700	3	-	902170	902622	789624	2	303,124,	0,406,
#Deleted in new
chr14_KI270846v1_alt	909703	909757	chr14_KI270846v1_alt:909703-909757	7	-	909703	909703	16724991	1	54,	0,
#Deleted in new
chr14_KI270846v1_alt	913387	913897	chr14_KI270846v1_alt:913387-913897	3	-	913387	913847	0	2	310,117,	0,393,
#Deleted in new
chr14_KI270846v1_alt	917043	917242	chr14_KI270846v1_alt:917043-917242	7	-	917043	917043	16724991	1	199,	0,
#Deleted in new
chr14_KI270846v1_alt	928093	928234	chr14_KI270846v1_alt:928093-928234	7	-	928093	928093	16724991	1	141,	0,
#Deleted in new
chr14_KI270846v1_alt	932628	932686	chr14_KI270846v1_alt:932628-932686	7	-	932628	932628	16724991	1	58,	0,
#Deleted in new
chr14_KI270846v1_alt	934811	935263	chr14_KI270846v1_alt:934811-935263	7	-	934811	934811	16724991	2	303,46,	0,406,
#Deleted in new
chr14_KI270846v1_alt	951770	952734	chr14_KI270846v1_alt:951770-952734	7	-	951770	951770	16724991	1	964,	0,
#Deleted in new
chr14_KI270846v1_alt	954936	955237	chr14_KI270846v1_alt:954936-955237	7	-	954936	954936	16724991	1	301,	0,
#Deleted in new
chr14_KI270846v1_alt	961941	962479	chr14_KI270846v1_alt:961941-962479	3	-	961941	962399	789624	2	309,126,	0,412,
#Deleted in new
chr14_KI270846v1_alt	969898	970072	chr14_KI270846v1_alt:969898-970072	7	-	969898	969898	16724991	2	48,45,	0,129,
#Deleted in new
chr14_KI270846v1_alt	981023	981435	chr14_KI270846v1_alt:981023-981435	7	-	981023	981023	16724991	2	298,40,	0,372,
#Deleted in new
chr14_KI270846v1_alt	985812	986062	chr14_KI270846v1_alt:985812-986062	7	-	985812	985812	16724991	1	250,	0,
#Deleted in new
chr14_KI270846v1_alt	998674	999170	chr14_KI270846v1_alt:998674-999170	3	-	998674	999112	789624	2	307,104,	0,392,
#Deleted in new
chr14_KI270846v1_alt	1002793	1003535	chr14_KI270846v1_alt:1002793-1003535	3	-	1002793	1003231	789624	2	307,350,	0,392,
#Deleted in new
chr14_KI270846v1_alt	1007496	1007533	chr14_KI270846v1_alt:1007496-1007533	7	-	1007496	1007496	16724991	1	37,	0,
#Deleted in new
chr14_KI270846v1_alt	1010260	1010706	chr14_KI270846v1_alt:1010260-1010706	7	-	1010260	1010260	16724991	2	293,42,	0,404,
#Deleted in new
chr14_KI270846v1_alt	1022819	1023150	chr14_KI270846v1_alt:1022819-1023150	7	-	1022819	1022819	16724991	1	331,	0,
#Deleted in new
chr14_KI270846v1_alt	1029488	1030023	chr14_KI270846v1_alt:1029488-1030023	3	-	1029488	1029944	789624	2	307,125,	0,410,
#Deleted in new
chr14_KI270846v1_alt	1048614	1049156	chr14_KI270846v1_alt:1048614-1049156	3	-	1048614	1049076	789624	2	313,126,	0,416,
#Deleted in new
chr14_KI270846v1_alt	1056053	1056277	chr14_KI270846v1_alt:1056053-1056277	7	-	1056053	1056053	16724991	1	224,	0,
#Deleted in new
chr14_KI270846v1_alt	1057795	1058234	chr14_KI270846v1_alt:1057795-1058234	7	-	1057795	1057795	16724991	2	271,46,	0,393,
#Deleted in new
chr14_KI270846v1_alt	1070420	1070915	chr14_KI270846v1_alt:1070420-1070915	3	-	1070420	1070856	789624	2	307,105,	0,390,
#Deleted in new
chr14_KI270846v1_alt	1075184	1075486	chr14_KI270846v1_alt:1075184-1075486	7	-	1075184	1075184	16724991	1	302,	0,
#Deleted in new
chr14_KI270846v1_alt	1076396	1076655	chr14_KI270846v1_alt:1076396-1076655	7	-	1076396	1076396	16724991	1	259,	0,
#Deleted in new
chr14_KI270846v1_alt	1078054	1078505	chr14_KI270846v1_alt:1078054-1078505	7	-	1078054	1078054	16724991	2	307,46,	0,405,
#Deleted in new
chr14_KI270846v1_alt	1084354	1085026	chr14_KI270846v1_alt:1084354-1085026	3	-	1084354	1084805	789624	2	304,267,	0,405,
#Deleted in new
chr14_KI270846v1_alt	1091348	1091603	chr14_KI270846v1_alt:1091348-1091603	7	-	1091348	1091348	16724991	1	255,	0,
#Deleted in new
chr14_KI270846v1_alt	1093024	1093471	chr14_KI270846v1_alt:1093024-1093471	7	-	1093024	1093024	16724991	2	307,46,	0,401,
#Deleted in new
chr14_KI270846v1_alt	1097779	1098230	chr14_KI270846v1_alt:1097779-1098230	7	-	1097779	1097779	16724991	2	322,46,	0,405,
#Deleted in new
chr14_KI270846v1_alt	1101440	1101875	chr14_KI270846v1_alt:1101440-1101875	7	-	1101440	1101440	16724991	2	305,46,	0,389,
#Deleted in new
chr14_KI270846v1_alt	1110572	1110852	chr14_KI270846v1_alt:1110572-1110852	7	-	1110572	1110572	16724991	1	280,	0,
#Deleted in new
chr14_KI270846v1_alt	1114035	1114534	chr14_KI270846v1_alt:1114035-1114534	3	-	1114035	1114473	789624	2	307,107,	0,392,
#Deleted in new
chr14_KI270846v1_alt	1118927	1119504	chr14_KI270846v1_alt:1118927-1119504	3	-	1118927	1119359	0	2	304,191,	0,386,
#Deleted in new
chr14_KI270846v1_alt	1122875	1123332	chr14_KI270846v1_alt:1122875-1123332	7	-	1122875	1122875	16724991	2	308,46,	0,411,
#Deleted in new
chr14_KI270846v1_alt	1128350	1128465	chr14_KI270846v1_alt:1128350-1128465	3	+	1128350	1128350	8553170	1	115,	0,
#Deleted in new
chr14_KI270846v1_alt	1129396	1129652	chr14_KI270846v1_alt:1129396-1129652	7	-	1129396	1129396	16724991	1	256,	0,
#Deleted in new
chr14_KI270846v1_alt	1130797	1131336	chr14_KI270846v1_alt:1130797-1131336	3	-	1130797	1131235	789624	2	310,147,	0,392,
#Deleted in new
chr14_KI270846v1_alt	1134820	1135264	chr14_KI270846v1_alt:1134820-1135264	7	-	1134820	1134820	16724991	2	295,45,	0,399,
#Deleted in new
chr14_KI270846v1_alt	1142229	1142464	chr14_KI270846v1_alt:1142229-1142464	7	-	1142229	1142229	16724991	1	235,	0,
#Deleted in new
chr14_KI270846v1_alt	1143915	1144360	chr14_KI270846v1_alt:1143915-1144360	7	-	1143915	1143915	16724991	2	295,46,	0,399,
#Deleted in new
chr14_KI270846v1_alt	1149401	1149937	chr14_KI270846v1_alt:1149401-1149937	3	-	1149401	1149860	789624	2	307,126,	0,410,
#Deleted in new
chr14_KI270846v1_alt	1157770	1158211	chr14_KI270846v1_alt:1157770-1158211	7	-	1157770	1157770	16724991	2	299,42,	0,399,
#Deleted in new
chr14_KI270846v1_alt	1163475	1163723	chr14_KI270846v1_alt:1163475-1163723	7	-	1163475	1163475	16724991	1	248,	0,
#Deleted in new
chr14_KI270846v1_alt	1166693	1167223	chr14_KI270846v1_alt:1166693-1167223	3	-	1166693	1167144	789624	2	304,125,	0,405,
#Deleted in new
chr14_KI270846v1_alt	1172281	1172721	chr14_KI270846v1_alt:1172281-1172721	7	-	1172281	1172281	16724991	2	311,46,	0,394,
#Deleted in new
chr14_KI270846v1_alt	1175073	1176029	chr14_KI270846v1_alt:1175073-1176029	7	-	1175073	1175073	16724991	1	956,	0,
#Deleted in new
chr14_KI270846v1_alt	1178195	1178241	chr14_KI270846v1_alt:1178195-1178241	7	-	1178195	1178195	16724991	1	46,	0,
#Deleted in new
chr14_KI270846v1_alt	1178791	1178879	chr14_KI270846v1_alt:1178791-1178879	7	-	1178791	1178791	16724991	1	88,	0,
#Deleted in new
chr14_KI270846v1_alt	1184335	1184567	chr14_KI270846v1_alt:1184335-1184567	7	-	1184335	1184335	16724991	1	232,	0,
#Deleted in new
chr14_KI270846v1_alt	1186780	1187076	chr14_KI270846v1_alt:1186780-1187076	7	-	1186780	1186780	16724991	1	296,	0,
#Deleted in new
chr14_KI270846v1_alt	1195530	1195825	chr14_KI270846v1_alt:1195530-1195825	7	-	1195530	1195530	16724991	1	295,	0,
#Deleted in new
chr14_KI270846v1_alt	1206360	1206860	chr14_KI270846v1_alt:1206360-1206860	3	-	1206360	1206799	789624	2	307,107,	0,393,
#Deleted in new
chr14_KI270846v1_alt	1215252	1215772	chr14_KI270846v1_alt:1215252-1215772	3	-	1215252	1215696	789624	2	312,122,	0,398,
#Deleted in new
chr14_KI270846v1_alt	1219841	1220286	chr14_KI270846v1_alt:1219841-1220286	7	-	1219841	1219841	16724991	2	304,38,	0,407,
#Deleted in new
chr14_KI270846v1_alt	1228788	1229226	chr14_KI270846v1_alt:1228788-1229226	3	-	1228788	1229226	789624	2	307,46,	0,392,
#Deleted in new
chr14_KI270846v1_alt	1241970	1242424	chr14_KI270846v1_alt:1241970-1242424	3	-	1241970	1242424	789624	2	293,63,	0,391,
#Deleted in new
chr14_KI270846v1_alt	1253360	1253857	chr14_KI270846v1_alt:1253360-1253857	3	-	1253360	1253799	789624	2	307,104,	0,393,
#Deleted in new
chr14_KI270846v1_alt	1261744	1262264	chr14_KI270846v1_alt:1261744-1262264	3	-	1261744	1262188	789624	2	312,122,	0,398,
#Deleted in new
chr14_KI270846v1_alt	1266333	1266792	chr14_KI270846v1_alt:1266333-1266792	7	-	1266333	1266333	16724991	2	310,46,	0,413,
#Deleted in new
chr14_KI270846v1_alt	1281864	1282167	chr14_KI270846v1_alt:1281864-1282167	3	-	1281864	1282167	8553170	1	303,	0,
#Deleted in new
chr14_KI270846v1_alt	1281865	1282407	chr14_KI270846v1_alt:1281865-1282407	0	-	1281865	1282327	789624	2	313,126,	0,416,
#Deleted in new
chr14_KI270846v1_alt	1293865	1294407	chr14_KI270846v1_alt:1293865-1294407	3	-	1293865	1294327	789624	2	313,126,	0,416,
#Deleted in new
chr14_KI270846v1_alt	1301613	1302305	chr14_KI270846v1_alt:1301613-1302305	3	-	1301613	1302069	789624	2	307,282,	0,410,
#Deleted in new
chr14_KI270846v1_alt	1312347	1312588	chr14_KI270846v1_alt:1312347-1312588	7	-	1312347	1312347	16724991	1	241,	0,
#Deleted in new
chr14_KI270846v1_alt	1314860	1315321	chr14_KI270846v1_alt:1314860-1315321	7	-	1314860	1314860	16724991	2	313,45,	0,416,
#Deleted in new
chr14_KI270846v1_alt	1319042	1319337	chr14_KI270846v1_alt:1319042-1319337	7	-	1319042	1319042	16724991	1	295,	0,
#Deleted in new
chr14_KI270846v1_alt	1322940	1323226	chr14_KI270846v1_alt:1322940-1323226	7	-	1322940	1322940	16724991	1	286,	0,
#Deleted in new
chr14_KI270846v1_alt	1342296	1342591	chr14_KI270846v1_alt:1342296-1342591	7	-	1342296	1342296	16724991	1	295,	0,
#Deleted in new
chr14_KI270847v1_alt	913	7588	chr14_KI270847v1_alt:913-7588	0	+	913	913	8553170	3	82,93,271,	0,5443,6404,
#Deleted in new
chr14_KI270847v1_alt	5985	8068	chr14_KI270847v1_alt:5985-8068	3	+	5985	5985	8553170	2	278,1712,	0,371,
#Deleted in new
chr14_KI270847v1_alt	6170	7588	chr14_KI270847v1_alt:6170-7588	0	+	6170	6170	8553170	3	93,93,246,	0,186,1172,
#Deleted in new
chr14_KI270847v1_alt	6178	7589	chr14_KI270847v1_alt:6178-7589	1	+	6178	6178	8553170	3	85,93,272,	0,178,1139,
#Deleted in new
chr14_KI270847v1_alt	20258	22044	chr14_KI270847v1_alt:20258-22044	3	-	20258	20258	789624	2	970,414,	0,1372,
#Deleted in new
chr14_KI270847v1_alt	37641	49855	chr14_KI270847v1_alt:37641-49855	3	+	37921	49446	0	8	326,47,94,69,99,453,482,493,	0,1119,3525,4470,6637,8170,9290,11721,
#Deleted in new
chr14_KI270847v1_alt	37718	46243	chr14_KI270847v1_alt:37718-46243	0	+	37921	42135	789624	5	249,47,69,99,432,	0,1042,4393,6560,8093,
#Deleted in new
chr14_KI270847v1_alt	37737	49815	chr14_KI270847v1_alt:37737-49815	1	+	37921	49446	789624	7	230,47,94,69,99,482,453,	0,1023,3429,4374,6541,9194,11625,
#Deleted in new
chr14_KI270847v1_alt	37924	46830	chr14_KI270847v1_alt:37924-46830	0	+	37924	37924	8553170	6	43,94,69,99,453,131,	0,3242,4187,6354,7887,8775,
#Deleted in new
chr14_KI270847v1_alt	40662	42151	chr14_KI270847v1_alt:40662-42151	0	+	40662	40662	8553170	2	598,40,	0,1449,
#Deleted in new
chr14_KI270847v1_alt	46238	47817	chr14_KI270847v1_alt:46238-47817	0	+	46238	46238	8553170	2	26,886,	0,693,
#Deleted in new
chr14_KI270847v1_alt	51475	230480	chr14_KI270847v1_alt:51475-230480	3	-	53044	229725	0	11	1613,163,68,166,41,99,118,126,25,237,147,	0,9417,15032,21287,25441,25837,56966,79762,139681,178155,178858,
#Deleted in new
chr14_KI270847v1_alt	51475	230365	chr14_KI270847v1_alt:51475-230365	1	-	56122	229725	0	11	4991,163,68,166,41,99,118,126,25,237,32,	0,9417,15032,21287,25441,25837,56966,79762,139681,178155,178858,
#Deleted in new
chr14_KI270847v1_alt	54314	230433	chr14_KI270847v1_alt:54314-230433	1	-	56122	229725	0	11	2152,163,68,166,41,99,118,126,25,116,100,	0,6578,12193,18448,22602,22998,54127,76923,136842,175316,176019,
#Deleted in new
chr14_KI270847v1_alt	54423	229841	chr14_KI270847v1_alt:54423-229841	1	-	56122	108448	789624	9	2043,163,68,166,41,99,118,126,211,	0,6469,12084,18339,22493,22889,54018,76814,175207,
#Deleted in new
chr14_KI270847v1_alt	60892	151442	chr14_KI270847v1_alt:60892-151442	0	-	60892	60892	8553170	7	163,68,166,41,99,126,34,	0,5615,11870,16024,16420,70345,90516,
#Deleted in new
chr14_KI270847v1_alt	61020	113501	chr14_KI270847v1_alt:61020-113501	0	-	61020	61020	8553170	7	35,68,166,41,99,118,37,	0,5487,11742,15896,16292,47421,52444,
#Deleted in new
chr14_KI270847v1_alt	72762	229848	chr14_KI270847v1_alt:72762-229848	0	-	72762	229725	789624	6	166,41,99,118,25,218,	0,4154,4550,35679,118394,156868,
#Deleted in new
chr14_KI270847v1_alt	72795	180920	chr14_KI270847v1_alt:72795-180920	0	-	72795	72795	8553170	6	133,41,99,118,126,174,	0,4121,4517,35646,58442,107951,
#Deleted in new
chr14_KI270847v1_alt	72832	229834	chr14_KI270847v1_alt:72832-229834	0	-	72832	229725	789624	7	96,41,117,118,126,25,204,	0,4084,4480,35609,58405,118324,156798,
#Deleted in new
chr14_KI270847v1_alt	76916	230882	chr14_KI270847v1_alt:76916-230882	0	-	76916	229725	789624	7	41,99,118,126,25,116,245,	0,396,31525,54321,114240,152714,153721,
#Deleted in new
chr14_KI270847v1_alt	76916	230384	chr14_KI270847v1_alt:76916-230384	0	-	76916	229725	789624	7	41,99,118,126,25,149,51,	0,396,31525,54321,114240,152714,153417,
#Deleted in new
chr14_KI270847v1_alt	77393	151536	chr14_KI270847v1_alt:77393-151536	0	-	77393	77393	8553170	4	18,118,126,128,	0,31048,53844,74015,
#Deleted in new
chr14_KI270847v1_alt	182013	186714	chr14_KI270847v1_alt:182013-186714	3	+	182013	182013	789624	1	4701,	0,
#Deleted in new
chr14_KI270847v1_alt	252627	253027	chr14_KI270847v1_alt:252627-253027	7	+	252627	252627	16724991	1	400,	0,
#Deleted in new
chr14_KI270847v1_alt	296757	299490	chr14_KI270847v1_alt:296757-299490	3	-	297748	298804	789624	3	2167,155,119,	0,2363,2614,
#Deleted in new
chr14_KI270847v1_alt	296760	299485	chr14_KI270847v1_alt:296760-299485	1	-	297748	298804	789624	2	2164,365,	0,2360,
#Deleted in new
chr14_KI270847v1_alt	299512	301648	chr14_KI270847v1_alt:299512-301648	3	+	300837	301233	789624	2	82,827,	0,1309,
#Deleted in new
chr14_KI270847v1_alt	299534	324519	chr14_KI270847v1_alt:299534-324519	0	+	300837	303499	789624	4	60,244,105,134,	0,1287,3920,24851,
#Deleted in new
chr14_KI270847v1_alt	299535	333148	chr14_KI270847v1_alt:299535-333148	0	+	299535	299535	8553170	7	59,134,61,96,54,106,60,	0,24850,25674,27058,29955,30202,33553,
#Deleted in new
chr14_KI270847v1_alt	299554	326689	chr14_KI270847v1_alt:299554-326689	3	+	300837	326689	789624	5	40,223,134,61,96,	0,1267,24831,25655,27039,
#Deleted in new
chr14_KI270847v1_alt	299574	301651	chr14_KI270847v1_alt:299574-301651	1	+	299949	301233	789624	2	473,830,	0,1247,
#Deleted in new
chr14_KI270847v1_alt	317455	321656	chr14_KI270847v1_alt:317455-321656	3	-	318249	321599	789624	2	889,265,	0,3936,
#Deleted in new
chr14_KI270847v1_alt	318067	321591	chr14_KI270847v1_alt:318067-321591	0	-	318227	321591	789624	2	277,121,	0,3403,
#Deleted in new
chr14_KI270847v1_alt	321617	341632	chr14_KI270847v1_alt:321617-341632	1	+	321947	341632	789624	11	386,61,96,54,106,209,150,163,62,45,81,	0,3592,4976,7873,8120,11471,12156,13193,15257,19887,19934,
#Deleted in new
chr14_KI270847v1_alt	321617	343777	chr14_KI270847v1_alt:321617-343777	3	+	321853	341597	789624	11	386,134,61,96,54,106,209,150,163,62,2273,	0,2768,3592,4976,7873,8120,11471,12156,13193,15257,19887,
#Deleted in new
chr14_KI270847v1_alt	321802	333119	chr14_KI270847v1_alt:321802-333119	0	+	321853	333119	789624	6	201,134,61,54,106,31,	0,2583,3407,7688,7935,11286,
#Deleted in new
chr14_KI270847v1_alt	321804	333236	chr14_KI270847v1_alt:321804-333236	0	+	321853	333236	789624	4	199,54,106,148,	0,7686,7933,11284,
#Deleted in new
chr14_KI270847v1_alt	321855	329761	chr14_KI270847v1_alt:321855-329761	0	+	321855	329761	789624	6	148,134,34,96,54,24,	0,2530,3381,4738,7635,7882,
#Deleted in new
chr14_KI270847v1_alt	324458	341586	chr14_KI270847v1_alt:324458-341586	0	+	324458	341586	789624	7	61,61,96,54,106,62,82,	0,751,2135,5032,5279,12416,17046,
#Deleted in new
chr14_KI270847v1_alt	333242	341787	chr14_KI270847v1_alt:333242-341787	0	+	333242	341597	789624	4	55,163,62,283,	0,1568,3632,8262,
#Deleted in new
chr14_KI270847v1_alt	338159	338701	chr14_KI270847v1_alt:338159-338701	7	-	338159	338159	16724991	1	542,	0,
#Deleted in new
chr14_KI270847v1_alt	352111	447583	chr14_KI270847v1_alt:352111-447583	3	-	356834	410613	789624	11	5539,462,179,190,144,161,76,209,1080,188,202,	0,8275,10926,13913,16097,19645,24052,26235,56308,58420,95270,
#Deleted in new
chr14_KI270847v1_alt	352111	408490	chr14_KI270847v1_alt:352111-408490	0	-	376231	408490	789624	8	5539,462,179,190,144,161,76,71,	0,8275,10926,13913,16097,19645,24052,56308,
#Deleted in new
chr14_KI270847v1_alt	356594	447601	chr14_KI270847v1_alt:356594-447601	1	-	356834	447490	789624	9	1056,462,179,190,144,161,76,209,220,	0,3792,6443,9430,11614,15162,19569,21752,90787,
#Deleted in new
chr14_KI270847v1_alt	356599	408711	chr14_KI270847v1_alt:356599-408711	0	-	356834	408711	789624	7	1051,462,179,190,144,161,292,	0,3787,6438,9425,11609,15157,51820,
#Deleted in new
chr14_KI270847v1_alt	358571	358885	chr14_KI270847v1_alt:358571-358885	7	+	358571	358571	16724991	1	314,	0,
#Deleted in new
chr14_KI270847v1_alt	370071	409179	chr14_KI270847v1_alt:370071-409179	0	-	370071	370071	8553170	4	1846,76,209,760,	0,6092,8275,38348,
#Deleted in new
chr14_KI270847v1_alt	402189	447654	chr14_KI270847v1_alt:402189-447654	1	-	403198	410613	789624	4	1080,1080,188,273,	0,6230,8342,45192,
#Deleted in new
chr14_KI270847v1_alt	402233	410720	chr14_KI270847v1_alt:402233-410720	1	-	403017	410613	789624	3	1059,1080,189,	0,6186,8298,
#Deleted in new
chr14_KI270847v1_alt	409414	446908	chr14_KI270847v1_alt:409414-446908	0	-	409414	410613	789624	3	85,188,43,	0,1117,37451,
#Deleted in new
chr14_KI270847v1_alt	447780	821834	chr14_KI270847v1_alt:447780-821834	3	+	592202	821466	789624	50	305,121,146,171,93,56,130,65,89,41,29,230,172,231,191,124,141,222,228,142,80,149,158,182,202,180,287,183,163,1221,108,117,84,103,141,39,113,86,174,69,111,105,78,90,176,187,198,78,42,569,	0,134452,141029,144339,154444,163192,163938,190759,195339,196067,199331,204770,207441,209247,238675,239474,241839,244623,246930,248984,253377,253541,260461,264140,267350,270020,279578,283903,284973,288402,297582,301302,303997,307926,310338,313389,320523,320721,322015,325974,329385,340132,349398,353353,355446,356898,358530,361116,371406,373485,
#Deleted in new
chr14_KI270847v1_alt	449089	449619	chr14_KI270847v1_alt:449089-449619	3	+	449089	449089	8553170	1	530,	0,
#Deleted in new
chr14_KI270847v1_alt	461752	462918	chr14_KI270847v1_alt:461752-462918	3	+	461830	462682	789624	2	204,329,	0,837,
#Deleted in new
chr14_KI270847v1_alt	511700	511796	chr14_KI270847v1_alt:511700-511796	3	-	511700	511700	8553170	1	96,	0,
#Deleted in new
chr14_KI270847v1_alt	544898	821466	chr14_KI270847v1_alt:544898-821466	1	+	545591	821466	789624	49	715,121,305,171,93,56,130,65,89,41,29,230,172,231,191,124,141,222,228,142,80,149,158,182,202,180,287,183,163,1221,108,84,103,141,39,113,86,174,69,111,105,78,90,176,187,198,78,42,201,	0,37334,43752,47221,57326,66074,66820,93641,98221,98949,102213,107652,110323,112129,141557,142356,144721,147505,149812,151866,156259,156423,163343,167022,170232,172902,182460,186785,187855,191284,200464,206879,210808,213220,216271,223405,223603,224897,228856,232267,243014,252280,256235,258328,259780,261412,263998,274288,276367,
#Deleted in new
chr14_KI270847v1_alt	545437	822438	chr14_KI270847v1_alt:545437-822438	1	+	545591	821466	789624	51	176,121,305,171,93,56,130,65,89,41,29,230,172,231,191,124,141,222,228,142,80,149,158,182,202,180,66,287,183,163,1221,108,117,84,103,141,39,113,86,174,69,111,105,78,90,176,187,198,78,42,1173,	0,36795,43213,46682,56787,65535,66281,93102,97682,98410,101674,107113,109784,111590,141018,141817,144182,146966,149273,151327,155720,155884,162804,166483,169693,172363,174020,181921,186246,187316,190745,199925,203645,206340,210269,212681,215732,222866,223064,224358,228317,231728,242475,251741,255696,257789,259241,260873,263459,273749,275828,
#Deleted in new
chr14_KI270847v1_alt	545591	821466	chr14_KI270847v1_alt:545591-821466	1	+	545591	821466	789624	50	22,121,305,171,93,56,130,65,89,41,29,230,172,231,191,124,141,222,228,142,80,149,158,182,202,180,287,183,163,1221,108,117,84,103,141,39,113,86,174,69,111,105,78,90,176,187,198,78,42,201,	0,36641,43059,46528,56633,65381,66127,92948,97528,98256,101520,106959,109630,111436,140864,141663,144028,146812,149119,151173,155566,155730,162650,166329,169539,172209,181767,186092,187162,190591,199771,203491,206186,210115,212527,215578,222712,222910,224204,228163,231574,242321,251587,255542,257635,259087,260719,263305,273595,275674,
#Deleted in new
chr14_KI270847v1_alt	551961	552072	chr14_KI270847v1_alt:551961-552072	3	-	551961	551961	8553170	1	111,	0,
#Deleted in new
chr14_KI270847v1_alt	592202	821466	chr14_KI270847v1_alt:592202-821466	1	+	592202	821466	789624	47	88,93,56,130,65,89,41,29,230,172,231,191,124,141,222,228,142,80,149,158,182,202,180,287,183,163,1221,108,117,84,103,141,39,113,86,174,69,111,105,78,90,176,187,198,78,42,201,	0,10022,18770,19516,46337,50917,51645,54909,60348,63019,64825,94253,95052,97417,100201,102508,104562,108955,109119,116039,119718,122928,125598,135156,139481,140551,143980,153160,156880,159575,163504,165916,168967,176101,176299,177593,181552,184963,195710,204976,208931,211024,212476,214108,216694,226984,229063,
#Deleted in new
chr14_KI270847v1_alt	751740	751900	chr14_KI270847v1_alt:751740-751900	3	+	751740	751740	8553170	1	160,	0,
#Deleted in new
chr14_KI270847v1_alt	803554	821905	chr14_KI270847v1_alt:803554-821905	0	+	803554	803554	8553170	4	2954,78,42,640,	0,5342,15632,17711,
#Deleted in new
chr14_KI270847v1_alt	832859	902321	chr14_KI270847v1_alt:832859-902321	1	-	836005	902280	789624	4	3249,130,136,134,	0,18943,60878,69328,
#Deleted in new
chr14_KI270847v1_alt	832859	903043	chr14_KI270847v1_alt:832859-903043	3	-	836005	902280	789624	5	3249,130,136,124,72,	0,18943,60878,69328,70112,
#Deleted in new
chr14_KI270847v1_alt	835599	902321	chr14_KI270847v1_alt:835599-902321	1	-	840552	902280	789624	5	509,171,130,136,134,	0,4798,16203,58138,66588,
#Deleted in new
chr14_KI270847v1_alt	835599	902982	chr14_KI270847v1_alt:835599-902982	0	-	840552	902280	789624	6	509,171,130,136,124,11,	0,4798,16203,58138,66588,67372,
#Deleted in new
chr14_KI270847v1_alt	1010323	1012321	chr14_KI270847v1_alt:1010323-1012321	3	+	1010323	1010323	8553170	1	1998,	0,
#Deleted in new
chr14_KI270847v1_alt	1019291	1040934	chr14_KI270847v1_alt:1019291-1040934	3	-	1019291	1019291	789624	11	659,143,252,40,106,158,136,105,106,600,97,	0,3240,4189,5840,6784,12509,13455,17331,17546,18671,21546,
#Deleted in new
chr14_KI270847v1_alt	1033455	1043731	chr14_KI270847v1_alt:1033455-1043731	1	+	1042847	1043726	789624	2	101,971,	0,9305,
#Deleted in new
chr14_KI270847v1_alt	1033473	1044170	chr14_KI270847v1_alt:1033473-1044170	3	+	1039833	1043726	789624	3	83,323,1410,	0,6136,9287,
#Deleted in new
chr14_KI270847v1_alt	1038178	1040902	chr14_KI270847v1_alt:1038178-1040902	1	-	1038178	1038178	8553170	3	234,227,65,	0,1495,2659,
#Deleted in new
chr14_KI270847v1_alt	1038234	1041528	chr14_KI270847v1_alt:1038234-1041528	1	-	1038234	1038234	8553170	3	328,165,52,	0,1439,3242,
#Deleted in new
chr14_KI270847v1_alt	1039794	1041628	chr14_KI270847v1_alt:1039794-1041628	1	-	1039794	1039794	8553170	2	106,152,	0,1682,
#Deleted in new
chr14_KI270847v1_alt	1041820	1043726	chr14_KI270847v1_alt:1041820-1043726	1	+	1042847	1043726	789624	2	196,966,	0,940,
#Deleted in new
chr14_KI270847v1_alt	1041903	1043544	chr14_KI270847v1_alt:1041903-1043544	0	+	1042847	1043544	789624	2	58,784,	0,857,
#Deleted in new
chr14_KI270847v1_alt	1041946	1044170	chr14_KI270847v1_alt:1041946-1044170	1	+	1042847	1043726	789624	2	242,1410,	0,814,
#Deleted in new
chr14_KI270847v1_alt	1048714	1091353	chr14_KI270847v1_alt:1048714-1091353	3	-	1049217	1079101	789624	10	640,154,565,172,246,156,167,105,279,358,	0,3545,4955,13196,16846,19199,20164,22613,30181,42281,
#Deleted in new
chr14_KI270847v1_alt	1048727	1071983	chr14_KI270847v1_alt:1048727-1071983	1	-	1049217	1071494	789624	8	627,154,565,172,246,156,167,656,	0,3532,4942,13183,16833,19186,20151,22600,
#Deleted in new
chr14_KI270847v1_alt	1048728	1055057	chr14_KI270847v1_alt:1048728-1055057	0	-	1048728	1048728	8553170	3	626,154,1388,	0,3531,4941,
#Deleted in new
chr14_KI270847v1_alt	1052280	1070141	chr14_KI270847v1_alt:1052280-1070141	0	-	1052280	1069674	789624	7	133,565,172,246,156,167,472,	0,1389,9630,13280,15633,16598,17389,
#Deleted in new
chr14_KI270847v1_alt	1053896	1091292	chr14_KI270847v1_alt:1053896-1091292	0	-	1053896	1053896	8553170	3	232,50,297,	0,25228,37099,
#Deleted in new
chr14_KI270847v1_alt	1054116	1058691	chr14_KI270847v1_alt:1054116-1058691	3	+	1054116	1054116	8553170	5	48,74,130,60,241,	0,1647,2008,2645,4334,
#Deleted in new
chr14_KI270847v1_alt	1065571	1069833	chr14_KI270847v1_alt:1065571-1069833	0	-	1065571	1069674	789624	3	235,167,164,	0,3307,4098,
#Deleted in new
chr14_KI270847v1_alt	1067966	1091281	chr14_KI270847v1_alt:1067966-1091281	0	-	1067966	1071392	789624	4	103,167,105,286,	0,912,3361,23029,
#Deleted in new
chr14_KI270847v1_alt	1068752	1071611	chr14_KI270847v1_alt:1068752-1071611	0	-	1068752	1068752	8553170	2	293,284,	0,2575,
#Deleted in new
chr14_KI270847v1_alt	1068884	1088645	chr14_KI270847v1_alt:1068884-1088645	0	-	1068884	1079101	789624	3	161,279,136,	0,10011,19625,
#Deleted in new
chr14_KI270847v1_alt	1082816	1091301	chr14_KI270847v1_alt:1082816-1091301	0	-	1082816	1082816	8553170	3	39,51,306,	0,1665,8179,
#Deleted in new
chr14_KI270847v1_alt	1111831	1122114	chr14_KI270847v1_alt:1111831-1122114	1	+	1111831	1111831	789624	9	24,237,124,83,100,578,132,117,542,	0,729,2067,2313,3561,3875,5953,7585,9741,
#Deleted in new
chr14_KI270847v1_alt	1111835	1115785	chr14_KI270847v1_alt:1111835-1115785	0	+	1111835	1111835	8553170	5	20,121,124,83,79,	0,841,2063,2309,3871,
#Deleted in new
chr14_KI270847v1_alt	1111857	1123425	chr14_KI270847v1_alt:1111857-1123425	3	+	1111857	1111857	789624	7	276,237,83,175,132,117,255,	0,703,2287,3849,5927,7559,11313,
#Deleted in new
chr14_KI270847v1_alt	1111901	1114022	chr14_KI270847v1_alt:1111901-1114022	0	+	1111901	1111901	8553170	3	232,121,124,	0,775,1997,
#Deleted in new
chr14_KI270847v1_alt	1140890	1164186	chr14_KI270847v1_alt:1140890-1164186	3	+	1141099	1160484	0	6	212,96,119,85,195,3909,	0,11051,12634,17642,18257,19387,
#Deleted in new
chr14_KI270847v1_alt	1140939	1153973	chr14_KI270847v1_alt:1140939-1153973	1	+	1141099	1153647	0	3	163,96,449,	0,11002,12585,
#Deleted in new
chr14_KI270847v1_alt	1165481	1195760	chr14_KI270847v1_alt:1165481-1195760	0	-	1165481	1165481	8553170	8	543,130,2902,516,154,525,723,80,	0,2078,4076,9178,9993,11177,28105,30199,
#Deleted in new
chr14_KI270847v1_alt	1165483	1195807	chr14_KI270847v1_alt:1165483-1195807	3	-	1165752	1194304	789624	9	541,130,189,76,516,154,525,723,127,	0,2076,4074,6900,9176,9991,11175,28103,30197,
#Deleted in new
chr14_KI270847v1_alt	1165483	1170725	chr14_KI270847v1_alt:1165483-1170725	0	-	1165483	1165483	8553170	2	338,148,	0,5094,
#Deleted in new
chr14_KI270847v1_alt	1165483	1166386	chr14_KI270847v1_alt:1165483-1166386	0	-	1165483	1165483	8553170	2	541,77,	0,826,
#Deleted in new
chr14_KI270847v1_alt	1165484	1195764	chr14_KI270847v1_alt:1165484-1195764	1	-	1165752	1177151	789624	8	540,130,189,76,516,154,525,84,	0,2075,4073,6899,9175,9990,11174,30196,
#Deleted in new
chr14_KI270847v1_alt	1165499	1195745	chr14_KI270847v1_alt:1165499-1195745	1	-	1165752	1194304	789624	10	525,130,189,76,516,154,525,45,513,65,	0,2060,4058,6884,9160,9975,11159,28087,28297,30181,
#Deleted in new
chr14_KI270847v1_alt	1165514	1176815	chr14_KI270847v1_alt:1165514-1176815	1	-	1165752	1176781	789624	8	510,130,189,76,516,154,106,49,	0,2045,4043,6869,9145,9960,11144,11252,
#Deleted in new
chr14_KI270847v1_alt	1165526	1195764	chr14_KI270847v1_alt:1165526-1195764	1	-	1165752	1194175	789624	9	498,130,189,76,516,154,525,597,84,	0,2033,4031,6857,9133,9948,11132,28060,30154,
#Deleted in new
chr14_KI270847v1_alt	1165581	1195774	chr14_KI270847v1_alt:1165581-1195774	1	-	1165581	1177151	789624	10	50,123,130,189,76,516,154,525,723,94,	0,320,1978,3976,6802,9078,9893,11077,28005,30099,
#Deleted in new
chr14_KI270847v1_alt	1165749	1167940	chr14_KI270847v1_alt:1165749-1167940	0	-	1165749	1165749	8553170	2	275,381,	0,1810,
#Deleted in new
chr14_KI270847v1_alt	1193527	1195708	chr14_KI270847v1_alt:1193527-1195708	0	-	1193527	1193527	8553170	2	782,28,	0,2153,
#Deleted in new
chr14_KI270847v1_alt	1195843	1217276	chr14_KI270847v1_alt:1195843-1217276	3	+	1211499	1217130	0	5	168,79,33,162,238,	0,15605,19457,20532,21195,
#Deleted in new
chr14_KI270847v1_alt	1195862	1218408	chr14_KI270847v1_alt:1195862-1218408	0	+	1195862	1195862	8553170	3	149,79,344,	0,15586,22202,
#Deleted in new
chr14_KI270847v1_alt	1195872	1215910	chr14_KI270847v1_alt:1195872-1215910	0	+	1195872	1195872	8553170	3	139,79,610,	0,15576,19428,
#Deleted in new
chr14_KI270847v1_alt	1195890	1217271	chr14_KI270847v1_alt:1195890-1217271	1	+	1211499	1217130	0	5	121,125,33,162,233,	0,15512,19410,20485,21148,
#Deleted in new
chr14_KI270847v1_alt	1195917	1203861	chr14_KI270847v1_alt:1195917-1203861	0	+	1195917	1195917	8553170	3	94,56,256,	0,6892,7688,
#Deleted in new
chr14_KI270847v1_alt	1195917	1217098	chr14_KI270847v1_alt:1195917-1217098	0	+	1212215	1217098	789624	6	94,79,187,33,162,60,	0,15531,16136,19383,20458,21121,
#Deleted in new
chr14_KI270847v1_alt	1195917	1217203	chr14_KI270847v1_alt:1195917-1217203	1	+	1212215	1216593	789624	6	94,79,187,33,246,165,	0,15531,16136,19383,20458,21121,
#Deleted in new
chr14_KI270847v1_alt	1195926	1217270	chr14_KI270847v1_alt:1195926-1217270	1	+	1202849	1217066	789624	6	85,56,79,33,162,232,	0,6883,15522,19374,20449,21112,
#Deleted in new
chr14_KI270847v1_alt	1195936	1217103	chr14_KI270847v1_alt:1195936-1217103	0	+	1212215	1217103	789624	6	75,110,184,33,162,65,	0,15481,16120,19364,20439,21102,
#Deleted in new
chr14_KI270847v1_alt	1195943	1217271	chr14_KI270847v1_alt:1195943-1217271	1	+	1211499	1217130	789624	4	68,79,33,233,	0,15505,19357,21095,
#Deleted in new
chr14_KI270847v1_alt	1195948	1217271	chr14_KI270847v1_alt:1195948-1217271	1	+	1211499	1217130	789624	3	63,110,233,	0,15469,21090,
#Deleted in new
chr14_KI270847v1_alt	1195957	1217271	chr14_KI270847v1_alt:1195957-1217271	1	+	1211499	1217130	789624	5	54,150,110,33,233,	0,13354,15460,19343,21081,
#Deleted in new
chr14_KI270847v1_alt	1211468	1217271	chr14_KI270847v1_alt:1211468-1217271	1	+	1211499	1216593	789624	4	59,33,246,233,	0,3832,4907,5570,
#Deleted in new
chr14_KI270847v1_alt	1219397	1230416	chr14_KI270847v1_alt:1219397-1230416	0	+	1226244	1230416	789624	6	199,154,120,115,30,74,	0,929,5842,6823,10015,10945,
#Deleted in new
chr14_KI270847v1_alt	1225295	1231252	chr14_KI270847v1_alt:1225295-1231252	3	+	1230350	1231089	789624	4	64,30,162,249,	0,4117,5047,5708,
#Deleted in new
chr14_KI270847v1_alt	1225297	1226756	chr14_KI270847v1_alt:1225297-1226756	0	+	1225297	1225297	8553170	2	62,536,	0,923,
#Deleted in new
chr14_KI270847v1_alt	1225297	1226695	chr14_KI270847v1_alt:1225297-1226695	0	+	1225297	1225297	8553170	2	62,509,	0,889,
#Deleted in new
chr14_KI270847v1_alt	1225300	1230401	chr14_KI270847v1_alt:1225300-1230401	0	+	1226244	1230401	789624	4	23,115,30,59,	0,920,4112,5042,
#Deleted in new
chr14_KI270847v1_alt	1225310	1231257	chr14_KI270847v1_alt:1225310-1231257	1	+	1226244	1231089	789624	5	49,149,30,162,254,	0,876,4102,5032,5693,
#Deleted in new
chr14_KI270847v1_alt	1225316	1231252	chr14_KI270847v1_alt:1225316-1231252	1	+	1226244	1231089	789624	6	43,53,149,30,162,249,	0,171,870,4096,5026,5687,
#Deleted in new
chr14_KI270847v1_alt	1225323	1231255	chr14_KI270847v1_alt:1225323-1231255	1	+	1226244	1231089	789624	4	36,149,162,252,	0,863,5019,5680,
#Deleted in new
chr14_KI270847v1_alt	1225376	1231260	chr14_KI270847v1_alt:1225376-1231260	1	+	1226244	1231089	789624	5	164,115,30,153,257,	0,844,4036,4975,5627,
#Deleted in new
chr14_KI270847v1_alt	1225376	1231257	chr14_KI270847v1_alt:1225376-1231257	1	+	1226244	1231089	789624	5	164,115,30,162,254,	0,844,4036,4966,5627,
#Deleted in new
chr14_KI270847v1_alt	1227412	1231250	chr14_KI270847v1_alt:1227412-1231250	0	+	1227412	1227412	8553170	3	2030,162,247,	0,2930,3591,
#Deleted in new
chr14_KI270847v1_alt	1229412	1231256	chr14_KI270847v1_alt:1229412-1231256	0	+	1229412	1230774	789624	4	30,162,221,253,	0,930,1223,1591,
#Deleted in new
chr14_KI270847v1_alt	1230072	1231252	chr14_KI270847v1_alt:1230072-1231252	0	+	1230072	1230072	8553170	2	432,249,	0,931,
#Deleted in new
chr14_KI270847v1_alt	1242340	1243963	chr14_KI270847v1_alt:1242340-1243963	0	-	1242340	1242340	8553170	3	214,162,140,	0,735,1483,
#Deleted in new
chr14_KI270847v1_alt	1242342	1244226	chr14_KI270847v1_alt:1242342-1244226	1	-	1242360	1244126	789624	4	212,162,30,107,	0,733,1481,1777,
#Deleted in new
chr14_KI270847v1_alt	1242342	1243539	chr14_KI270847v1_alt:1242342-1243539	0	-	1242342	1242342	8553170	2	212,464,	0,733,
#Deleted in new
chr14_KI270847v1_alt	1242350	1244815	chr14_KI270847v1_alt:1242350-1244815	3	-	1242360	1243199	789624	4	204,162,30,160,	0,725,1473,2305,
#Deleted in new
chr14_KI270847v1_alt	1242410	1244151	chr14_KI270847v1_alt:1242410-1244151	0	-	1242410	1242410	8553170	2	144,328,	0,1413,
#Deleted in new
chr14_KI270847v1_alt	1242938	1244142	chr14_KI270847v1_alt:1242938-1244142	0	-	1242938	1242938	8553170	2	915,23,	0,1181,
#Deleted in new
chr14_KI270847v1_alt	1260689	1345181	chr14_KI270847v1_alt:1260689-1345181	0	+	1323077	1345181	789624	6	181,69,74,103,104,33,	0,21416,29926,62336,81147,84459,
#Deleted in new
chr14_KI270847v1_alt	1288873	1394297	chr14_KI270847v1_alt:1288873-1394297	3	+	1289027	1393205	789624	25	271,74,103,148,74,107,108,122,123,170,120,78,84,183,106,148,145,42,75,70,87,94,71,148,1117,	0,1742,34152,56275,56930,59341,60250,63253,66361,67476,67977,70323,71275,72045,75860,77437,82148,84471,84983,90566,91075,91482,92647,101062,104307,
#Deleted in new
chr14_KI270847v1_alt	1288899	1342408	chr14_KI270847v1_alt:1288899-1342408	1	+	1289027	1341916	789624	5	245,74,103,93,361,	0,1716,34126,52948,53148,
#Deleted in new
chr14_KI270847v1_alt	1290022	1345268	chr14_KI270847v1_alt:1290022-1345268	0	+	1323077	1345268	789624	4	267,74,103,120,	0,593,33003,55126,
#Deleted in new
chr14_KI270847v1_alt	1290341	1348280	chr14_KI270847v1_alt:1290341-1348280	0	+	1323077	1348280	789624	6	124,74,103,148,74,66,	0,274,32684,54807,55462,57873,
#Deleted in new
chr14_KI270847v1_alt	1395021	1407833	chr14_KI270847v1_alt:1395021-1407833	3	-	1398526	1405155	0	5	3697,151,274,768,83,	0,5648,7826,9416,12729,
#Deleted in new
chr14_KI270847v1_alt	1397874	1407659	chr14_KI270847v1_alt:1397874-1407659	1	-	1398526	1407240	789624	5	844,151,274,768,489,	0,2795,4973,6563,9296,
#Deleted in new
chr14_KI270847v1_alt	1418809	1437881	chr14_KI270847v1_alt:1418809-1437881	0	-	1424493	1429210	789624	5	356,148,271,781,53,	0,1823,5488,9639,19019,
#Deleted in new
chr14_KI270847v1_alt	1418810	1437956	chr14_KI270847v1_alt:1418810-1437956	3	-	1418979	1429210	0	5	355,148,271,632,128,	0,1822,5487,9787,19018,
#Deleted in new
chr14_KI270847v1_alt	1428801	1437951	chr14_KI270847v1_alt:1428801-1437951	0	-	1428801	1429210	789624	2	596,123,	0,9027,
#Deleted in new
chr14_KI270847v1_alt	1478201	1488979	chr14_KI270847v1_alt:1478201-1488979	3	-	1478277	1483285	789624	5	268,148,271,659,139,	0,1127,2703,4429,10639,
#Deleted in new
chr14_KI270847v1_alt	1478201	1482688	chr14_KI270847v1_alt:1478201-1482688	0	-	1479339	1482688	789624	3	268,148,58,	0,1127,4429,
#Deleted in new
chr14_KI270847v1_alt	1478277	1483285	chr14_KI270847v1_alt:1478277-1483285	1	-	1478277	1483285	789624	4	192,148,271,655,	0,1051,2627,4353,
#Deleted in new
chr14_KI270847v1_alt	1493318	1507264	chr14_KI270847v1_alt:1493318-1507264	1	-	1495020	1499809	789624	7	1894,148,271,650,104,192,273,	0,2717,4124,5845,11813,12072,13673,
#Deleted in new
chr14_KI270847v1_alt	1493318	1507264	chr14_KI270847v1_alt:1493318-1507264	1	-	1495020	1499809	789624	5	1894,148,271,650,273,	0,2717,4124,5845,13673,
#Deleted in new
chr14_KI270847v1_alt	1493318	1507264	chr14_KI270847v1_alt:1493318-1507264	3	-	1495020	1499809	789624	6	1894,148,271,650,104,273,	0,2717,4124,5845,11813,13673,
#Deleted in new
chr14_KI270847v1_alt	1493318	1507209	chr14_KI270847v1_alt:1493318-1507209	1	-	1495020	1499809	789624	5	1894,148,271,650,181,	0,2717,4124,5845,13710,
#Deleted in new
chr14_KI270847v1_alt	1494920	1505392	chr14_KI270847v1_alt:1494920-1505392	1	-	1495020	1499809	789624	5	292,148,271,650,261,	0,1115,2522,4243,10211,
#Deleted in new
chr14_KI270847v1_alt	1494947	1507265	chr14_KI270847v1_alt:1494947-1507265	1	-	1495020	1499809	789624	7	265,148,271,650,104,210,237,	0,1088,2495,4216,10184,10425,12081,
#Deleted in new
chr14_KI270847v1_alt	1494960	1507234	chr14_KI270847v1_alt:1494960-1507234	1	-	1495020	1499809	789624	6	252,148,271,650,101,206,	0,1075,2482,4203,10171,12068,
#Deleted in new
chr14_KI270847v1_alt	1495020	1507222	chr14_KI270847v1_alt:1495020-1507222	1	-	1495020	1499809	789624	6	192,148,271,650,104,194,	0,1015,2422,4143,10111,12008,
#Deleted in new
chr14_KI270847v1_alt	1495684	1505161	chr14_KI270847v1_alt:1495684-1505161	1	-	1496020	1499809	789624	4	499,271,650,30,	0,1758,3479,9447,
#Deleted in new
chr14_KI270847v1_alt	1499340	1505163	chr14_KI270847v1_alt:1499340-1505163	0	-	1499340	1499809	789624	2	611,32,	0,5791,
#Deleted in new
chr14_KI270847v1_alt	1499375	1507248	chr14_KI270847v1_alt:1499375-1507248	0	-	1499375	1499809	789624	4	438,101,192,220,	0,5756,6015,7653,
#Deleted in new
chr14_KI270847v1_alt	1499458	1507207	chr14_KI270847v1_alt:1499458-1507207	0	-	1499458	1499809	789624	2	355,216,	0,7533,
#Deleted in new
chr14_KI270847v1_alt	1499531	1507186	chr14_KI270847v1_alt:1499531-1507186	0	-	1499531	1499809	789624	3	282,104,195,	0,5600,7460,
#Deleted in new
chr14_KI270847v1_alt	1499742	1507207	chr14_KI270847v1_alt:1499742-1507207	0	-	1499742	1499809	789624	4	71,104,192,216,	0,5389,5648,7249,
#Deleted in new
chr14_KZ208919v1_alt	20165	63991	chr14_KZ208919v1_alt:20165-63991	3	-	22056	63896	789624	3	2443,90,779,	0,14355,43047,
#Deleted in new
chr14_KZ208919v1_alt	70648	71875	chr14_KZ208919v1_alt:70648-71875	7	+	70648	70648	16724991	1	1227,	0,
#Deleted in new
chr14_KZ208919v1_alt	72395	72457	chr14_KZ208919v1_alt:72395-72457	3	+	72395	72395	8553170	1	62,	0,
#Deleted in new
chr14_KZ208919v1_alt	97964	98101	chr14_KZ208919v1_alt:97964-98101	7	+	97964	97964	16724991	1	137,	0,
#Deleted in new
chr14_KZ208919v1_alt	151198	151385	chr14_KZ208919v1_alt:151198-151385	7	+	151198	151198	16724991	1	187,	0,
#Deleted in new
chr14_KZ208920v1_fix	30016	30720	chr14_KZ208920v1_fix:30016-30720	3	-	30016	30016	8553170	2	408,164,	0,540,
#Deleted in new
chr14_KZ208920v1_fix	30131	30676	chr14_KZ208920v1_fix:30131-30676	0	-	30131	30131	8553170	1	545,	0,
#Deleted in new
chr14_KZ208920v1_fix	50214	52129	chr14_KZ208920v1_fix:50214-52129	7	+	50214	50214	16724991	1	1915,	0,
#Deleted in new
chr14_KZ208920v1_fix	68640	69977	chr14_KZ208920v1_fix:68640-69977	7	+	68640	68640	16724991	2	213,800,	0,537,
#Deleted in new
chr14_KZ208920v1_fix	92908	93215	chr14_KZ208920v1_fix:92908-93215	3	+	92908	92908	8553170	1	307,	0,
#Deleted in new
chr14_KZ208920v1_fix	118259	128375	chr14_KZ208920v1_fix:118259-128375	7	-	118259	118259	16724991	4	114,62,102,194,	0,8326,9069,9922,
#Deleted in new
chr14_KZ208920v1_fix	176916	183407	chr14_KZ208920v1_fix:176916-183407	3	-	176916	176916	8553170	3	653,68,88,	0,2729,6403,
#Deleted in new
chr14_KZ208920v1_fix	223225	235547	chr14_KZ208920v1_fix:223225-235547	3	-	223225	223225	8553170	3	340,205,392,	0,11500,11930,
#Deleted in new
chr14_KZ208920v1_fix	239709	255176	chr14_KZ208920v1_fix:239709-255176	3	-	239709	239709	789624	2	2428,424,	0,15043,
#Deleted in new
chr14_KZ208920v1_fix	240591	255145	chr14_KZ208920v1_fix:240591-255145	1	-	240591	240591	8553170	3	1546,260,42,	0,14161,14512,
#Deleted in new
chr14_KZ208920v1_fix	241194	255101	chr14_KZ208920v1_fix:241194-255101	0	-	241194	241194	8553170	2	943,549,	0,13358,
#Deleted in new
chr14_KZ208920v1_fix	241341	254348	chr14_KZ208920v1_fix:241341-254348	0	-	241341	241341	8553170	2	796,61,	0,12946,
#Deleted in new
chr14_KZ208920v1_fix	241664	295173	chr14_KZ208920v1_fix:241664-295173	0	-	241664	241664	8553170	2	473,111,	0,53398,
#Deleted in new
chr14_KZ208920v1_fix	253968	254831	chr14_KZ208920v1_fix:253968-254831	0	-	253968	253968	8553170	2	430,79,	0,784,
#Deleted in new
chr14_KZ208920v1_fix	254564	312734	chr14_KZ208920v1_fix:254564-312734	1	+	254767	312331	0	8	331,178,102,71,52,135,56,518,	0,1449,6316,12175,12345,12696,13624,57652,
#Deleted in new
chr14_KZ208920v1_fix	254712	312734	chr14_KZ208920v1_fix:254712-312734	1	+	254767	312267	0	6	183,178,102,52,56,518,	0,1301,6168,12197,13476,57504,
#Deleted in new
chr14_KZ208920v1_fix	254748	269101	chr14_KZ208920v1_fix:254748-269101	1	+	254767	268248	789624	4	147,178,102,913,	0,1265,6132,13440,
#Deleted in new
chr14_KZ208920v1_fix	254757	312469	chr14_KZ208920v1_fix:254757-312469	1	+	254767	312331	0	5	138,178,102,56,253,	0,1256,6123,13431,57459,
#Deleted in new
chr14_KZ208920v1_fix	254764	312636	chr14_KZ208920v1_fix:254764-312636	1	+	254767	312331	0	4	131,178,56,420,	0,1249,13424,57452,
#Deleted in new
chr14_KZ208920v1_fix	254767	312734	chr14_KZ208920v1_fix:254767-312734	1	+	254767	312331	0	6	128,178,71,52,56,518,	0,1246,11972,12142,13421,57449,
#Deleted in new
chr14_KZ208920v1_fix	254767	312739	chr14_KZ208920v1_fix:254767-312739	3	+	254767	312331	0	7	128,178,71,52,135,56,523,	0,1246,11972,12142,12493,13421,57449,
#Deleted in new
chr14_KZ208920v1_fix	267335	312734	chr14_KZ208920v1_fix:267335-312734	0	+	267335	312221	8553170	4	60,56,65,518,	0,853,1033,44881,
#Deleted in new
chr14_KZ208920v1_fix	313390	352355	chr14_KZ208920v1_fix:313390-352355	3	+	313390	313390	789624	5	402,265,135,56,524,	0,25330,36264,36872,38441,
#Deleted in new
chr14_KZ208920v1_fix	337430	352006	chr14_KZ208920v1_fix:337430-352006	5	+	337430	337430	16724991	5	176,261,135,56,175,	0,1871,12224,12832,14401,
#Deleted in new
chr14_KZ208920v1_fix	337454	339032	chr14_KZ208920v1_fix:337454-339032	4	+	337454	337454	16724991	2	152,312,	0,1266,
#Deleted in new
chr14_KZ208920v1_fix	337478	351879	chr14_KZ208920v1_fix:337478-351879	4	+	337478	337478	16724991	4	128,261,56,48,	0,1823,12784,14353,
#Deleted in new
chr14_KZ208920v1_fix	337478	351946	chr14_KZ208920v1_fix:337478-351946	7	+	337478	337478	16724991	8	128,178,33,71,53,135,56,115,	0,1242,6187,11655,11825,12176,12784,14353,
#Deleted in new
chr14_KZ208920v1_fix	352977	370706	chr14_KZ208920v1_fix:352977-370706	3	+	353131	370382	789624	40	194,95,51,60,116,98,71,74,76,89,95,87,110,78,77,105,70,82,97,55,173,69,94,99,129,114,176,88,138,64,209,101,316,129,67,90,119,181,111,350,	0,1709,2088,2242,2396,2711,3066,3237,3543,3701,4299,4622,4915,5167,5803,5960,6155,6680,6890,7135,7270,7664,7970,8157,8628,8927,9497,10480,10709,11120,11325,12246,12958,13622,14398,14567,16584,16786,17137,17379,
#Deleted in new
chr14_KZ208920v1_fix	358192	370704	chr14_KZ208920v1_fix:358192-370704	0	+	358192	358192	8553170	24	30,77,119,70,82,97,55,173,69,94,99,1045,88,138,64,209,101,793,67,90,119,181,111,348,	0,588,731,940,1465,1675,1920,2055,2449,2755,2942,3413,5265,5494,5905,6110,7031,7743,9183,9352,11369,11571,11922,12164,
#Deleted in new
chr14_KZ208920v1_fix	361718	362908	chr14_KZ208920v1_fix:361718-362908	0	+	361718	361718	8553170	3	16,114,434,	0,186,756,
#Deleted in new
chr14_KZ208920v1_fix	362896	370702	chr14_KZ208920v1_fix:362896-370702	0	+	362896	362896	8553170	11	649,475,209,101,316,67,90,119,181,111,346,	0,790,1406,2327,3039,4479,4648,6665,6867,7218,7460,
#Deleted in new
chr14_KZ208920v1_fix	371814	379076	chr14_KZ208920v1_fix:371814-379076	1	+	371960	378708	789624	18	192,115,172,180,75,75,84,90,105,87,60,134,55,52,134,237,175,211,	0,690,2096,2662,3214,3454,3694,3869,4335,4668,4990,5312,5523,5669,6042,6317,6756,7051,
#Deleted in new
chr14_KZ208920v1_fix	371814	379078	chr14_KZ208920v1_fix:371814-379078	3	+	373914	378708	789624	18	192,115,172,180,75,75,84,90,105,87,60,134,55,52,134,237,175,213,	0,690,2096,2662,3214,3454,3694,3869,4335,4668,4990,5312,5523,5669,6042,6317,6756,7051,
#Deleted in new
chr14_KZ208920v1_fix	371825	375103	chr14_KZ208920v1_fix:371825-375103	0	+	373914	375103	8553170	5	191,115,172,180,75,	0,679,2085,2651,3203,
#Deleted in new
chr14_KZ208920v1_fix	371874	375073	chr14_KZ208920v1_fix:371874-375073	0	+	373914	375073	8553170	5	79,115,172,180,45,	0,630,2036,2602,3154,
#Deleted in new
chr14_KZ208920v1_fix	371926	379064	chr14_KZ208920v1_fix:371926-379064	0	+	371926	371926	8553170	16	693,172,180,315,84,90,105,87,60,134,55,52,134,237,175,199,	0,1984,2550,3102,3582,3757,4223,4556,4878,5200,5411,5557,5930,6205,6644,6939,
#Deleted in new
chr14_KZ208920v1_fix	371994	374625	chr14_KZ208920v1_fix:371994-374625	0	+	373914	374625	8553170	4	120,102,172,149,	0,523,1916,2482,
#Deleted in new
chr14_KZ208920v1_fix	372067	375292	chr14_KZ208920v1_fix:372067-375292	0	+	373914	375292	8553170	6	47,115,216,180,75,24,	0,437,1799,2409,2961,3201,
#Deleted in new
chr14_KZ208920v1_fix	372164	374072	chr14_KZ208920v1_fix:372164-374072	0	+	373914	374072	8553170	3	249,42,162,	0,413,1746,
#Deleted in new
chr14_KZ208920v1_fix	372337	376155	chr14_KZ208920v1_fix:372337-376155	0	+	373914	376155	8553170	8	282,172,180,75,75,84,90,6,	0,1573,2139,2691,2931,3171,3346,3812,
#Deleted in new
chr14_KZ208920v1_fix	372499	375704	chr14_KZ208920v1_fix:372499-375704	0	+	375535	375704	8553170	6	120,180,110,75,84,21,	0,1977,2529,2769,3009,3184,
#Deleted in new
chr14_KZ208920v1_fix	372502	375279	chr14_KZ208920v1_fix:372502-375279	0	+	372502	372502	8553170	3	117,180,251,	0,1974,2526,
#Deleted in new
chr14_KZ208920v1_fix	372509	375289	chr14_KZ208920v1_fix:372509-375289	0	+	373914	375289	8553170	5	110,187,180,75,21,	0,1401,1967,2519,2759,
#Deleted in new
chr14_KZ208920v1_fix	372509	375560	chr14_KZ208920v1_fix:372509-375560	0	+	373914	375560	8553170	5	110,172,180,75,52,	0,1401,1967,2519,2999,
#Deleted in new
chr14_KZ208920v1_fix	372527	375289	chr14_KZ208920v1_fix:372527-375289	0	+	373914	375289	8553170	5	92,172,180,110,21,	0,1383,1949,2501,2741,
#Deleted in new
chr14_KZ208920v1_fix	372539	376489	chr14_KZ208920v1_fix:372539-376489	0	+	373914	374541	8553170	7	80,172,145,315,84,90,340,	0,1371,1972,2489,2969,3144,3610,
#Deleted in new
chr14_KZ208920v1_fix	372558	376562	chr14_KZ208920v1_fix:372558-376562	0	+	375535	376562	8553170	7	61,75,75,84,90,105,80,	0,2470,2710,2950,3125,3591,3924,
#Deleted in new
chr14_KZ208920v1_fix	372566	379064	chr14_KZ208920v1_fix:372566-379064	0	+	372566	372566	8553170	9	1516,180,745,715,266,507,237,175,199,	0,1910,2462,3583,4560,4917,5565,6004,6299,
#Deleted in new
chr14_KZ208920v1_fix	376535	379065	chr14_KZ208920v1_fix:376535-379065	0	+	376535	376535	8553170	3	1124,134,934,	0,1321,1596,
#Deleted in new
chr14_KZ208920v1_fix	376808	377818	chr14_KZ208920v1_fix:376808-377818	0	+	376808	376808	8553170	4	56,134,55,335,	0,318,529,675,
#Deleted in new
chr14_KZ208920v1_fix	381084	385603	chr14_KZ208920v1_fix:381084-385603	1	-	382213	383826	789624	3	1462,408,106,	0,2361,4413,
#Deleted in new
chr14_KZ208920v1_fix	381144	415992	chr14_KZ208920v1_fix:381144-415992	1	-	382213	383826	789624	3	1402,408,293,	0,2301,34555,
#Deleted in new
chr14_KZ208920v1_fix	381854	396108	chr14_KZ208920v1_fix:381854-396108	1	-	382213	383826	789624	4	692,408,324,93,	0,1591,12308,14161,
#Deleted in new
chr14_KZ208920v1_fix	381977	382964	chr14_KZ208920v1_fix:381977-382964	1	-	382213	382510	789624	2	569,219,	0,768,
#Deleted in new
chr14_KZ208920v1_fix	381985	382906	chr14_KZ208920v1_fix:381985-382906	3	-	382213	382510	789624	2	561,249,	0,672,
#Deleted in new
chr14_KZ208920v1_fix	383631	415988	chr14_KZ208920v1_fix:383631-415988	0	-	383631	383826	8553170	3	222,226,289,	0,1866,32068,
#Deleted in new
chr14_KZ208920v1_fix	395030	405103	chr14_KZ208920v1_fix:395030-405103	1	+	395046	404845	8553170	10	81,246,185,204,188,163,219,138,96,284,	0,2839,4150,4422,4996,5505,5942,8700,9107,9789,
#Deleted in new
chr14_KZ208920v1_fix	395115	405108	chr14_KZ208920v1_fix:395115-405108	1	+	395383	404942	789624	10	297,246,185,204,188,163,219,138,96,621,	0,2754,4065,4337,4911,5420,5857,8615,9022,9372,
#Deleted in new
chr14_KZ208920v1_fix	395127	400103	chr14_KZ208920v1_fix:395127-400103	0	+	399307	400103	8553170	6	105,80,246,185,204,77,	0,616,2742,4053,4325,4899,
#Deleted in new
chr14_KZ208920v1_fix	395136	401540	chr14_KZ208920v1_fix:395136-401540	1	+	395383	401283	789624	7	276,246,185,204,188,163,568,	0,2733,4044,4316,4890,5399,5836,
#Deleted in new
chr14_KZ208920v1_fix	395171	400086	chr14_KZ208920v1_fix:395171-400086	0	+	399307	400086	8553170	5	61,246,185,204,60,	0,2698,4009,4281,4855,
#Deleted in new
chr14_KZ208920v1_fix	395258	399569	chr14_KZ208920v1_fix:395258-399569	0	+	395383	397889	8553170	5	154,80,246,185,117,	0,485,2611,3922,4194,
#Deleted in new
chr14_KZ208920v1_fix	395278	405008	chr14_KZ208920v1_fix:395278-405008	1	+	399307	404942	789624	10	545,246,185,204,188,163,219,138,96,521,	0,2591,3902,4174,4748,5257,5694,8452,8859,9209,
#Deleted in new
chr14_KZ208920v1_fix	395288	401221	chr14_KZ208920v1_fix:395288-401221	0	+	395288	395288	8553170	5	535,246,185,204,686,	0,2581,3892,4164,5247,
#Deleted in new
chr14_KZ208920v1_fix	395288	405102	chr14_KZ208920v1_fix:395288-405102	1	+	399307	404942	789624	10	124,80,185,204,188,163,219,138,96,615,	0,455,3892,4164,4738,5247,5684,8442,8849,9199,
#Deleted in new
chr14_KZ208920v1_fix	395290	401281	chr14_KZ208920v1_fix:395290-401281	0	+	395290	395290	8553170	5	533,246,476,188,746,	0,2579,3890,4736,5245,
#Deleted in new
chr14_KZ208920v1_fix	395327	398041	chr14_KZ208920v1_fix:395327-398041	0	+	395327	395327	8553170	2	387,172,	0,2542,
#Deleted in new
chr14_KZ208920v1_fix	395334	399206	chr14_KZ208920v1_fix:395334-399206	0	+	395383	396200	8553170	5	78,80,236,246,26,	0,409,786,2535,3846,
#Deleted in new
chr14_KZ208920v1_fix	395354	405108	chr14_KZ208920v1_fix:395354-405108	1	+	399307	404942	8553170	9	469,246,185,204,188,163,219,138,621,	0,2515,3826,4098,4672,5181,5618,8376,9133,
#Deleted in new
chr14_KZ208920v1_fix	399489	403808	chr14_KZ208920v1_fix:399489-403808	0	+	399489	400536	8553170	5	167,199,163,219,78,	0,537,1046,1483,4241,
#Deleted in new
chr14_KZ208920v1_fix	401126	411576	chr14_KZ208920v1_fix:401126-411576	2	+	401126	411396	8553170	3	65,138,305,	0,2604,10145,
#Deleted in new
chr14_KZ208920v1_fix	403652	404700	chr14_KZ208920v1_fix:403652-404700	0	+	403652	403652	8553170	3	216,96,213,	0,485,835,
#Deleted in new
chr14_KZ208920v1_fix	415172	418284	chr14_KZ208920v1_fix:415172-418284	0	+	416572	418284	8553170	7	146,228,88,11,207,128,41,	0,502,1011,1187,1348,2722,3071,
#Deleted in new
chr14_KZ208920v1_fix	415604	425007	chr14_KZ208920v1_fix:415604-425007	1	+	416572	424287	789624	15	298,207,128,128,65,101,147,55,69,58,186,154,153,107,855,	0,916,2290,2639,3041,3428,3761,4123,4518,4932,5084,6211,6738,8344,8548,
#Deleted in new
chr14_KZ208920v1_fix	415604	417989	chr14_KZ208920v1_fix:415604-417989	0	+	415604	415604	8553170	3	298,184,95,	0,916,2290,
#Deleted in new
chr14_KZ208920v1_fix	415754	417959	chr14_KZ208920v1_fix:415754-417959	0	+	416572	417959	8553170	3	148,368,65,	0,605,2140,
#Deleted in new
chr14_KZ208920v1_fix	415754	418323	chr14_KZ208920v1_fix:415754-418323	0	+	415754	415754	8553170	4	148,212,128,80,	0,738,2140,2489,
#Deleted in new
chr14_KZ208920v1_fix	415754	419414	chr14_KZ208920v1_fix:415754-419414	0	+	416572	419414	8553170	7	148,184,73,128,65,101,49,	0,766,2195,2489,2891,3278,3611,
#Deleted in new
chr14_KZ208920v1_fix	415754	418327	chr14_KZ208920v1_fix:415754-418327	0	+	416572	418327	8553170	5	517,11,207,128,84,	0,605,766,2140,2489,
#Deleted in new
chr14_KZ208920v1_fix	415757	426218	chr14_KZ208920v1_fix:415757-426218	1	+	416572	424287	789624	15	514,368,128,128,65,101,147,55,69,58,186,154,153,107,2066,	0,602,2137,2486,2888,3275,3608,3970,4365,4779,4931,6058,6585,8191,8395,
#Deleted in new
chr14_KZ208920v1_fix	415768	426220	chr14_KZ208920v1_fix:415768-426220	0	+	416572	417978	789624	14	503,345,128,128,101,147,55,69,58,186,154,153,107,2068,	0,591,2126,2475,3264,3597,3959,4354,4768,4920,6047,6574,8180,8384,
#Deleted in new
chr14_KZ208920v1_fix	415779	417964	chr14_KZ208920v1_fix:415779-417964	0	+	416572	417964	8553170	5	123,88,11,184,70,	0,404,580,741,2115,
#Deleted in new
chr14_KZ208920v1_fix	415787	418660	chr14_KZ208920v1_fix:415787-418660	0	+	416572	418660	8553170	5	115,212,73,128,15,	0,705,2162,2456,2858,
#Deleted in new
chr14_KZ208920v1_fix	415787	419112	chr14_KZ208920v1_fix:415787-419112	0	+	416572	419112	8553170	5	115,207,73,128,80,	0,733,2162,2456,3245,
#Deleted in new
chr14_KZ208920v1_fix	415789	418371	chr14_KZ208920v1_fix:415789-418371	0	+	416572	418371	8553170	4	113,235,73,128,	0,703,2160,2454,
#Deleted in new
chr14_KZ208920v1_fix	415838	418696	chr14_KZ208920v1_fix:415838-418696	0	+	416572	418696	8553170	5	109,184,73,128,51,	0,682,2111,2405,2807,
#Deleted in new
chr14_KZ208920v1_fix	416153	416663	chr14_KZ208920v1_fix:416153-416663	0	+	416572	416663	8553170	3	118,11,171,	0,206,339,
#Deleted in new
chr14_KZ208920v1_fix	416163	418664	chr14_KZ208920v1_fix:416163-418664	0	+	416572	417978	8553170	6	108,11,184,128,128,19,	0,196,357,1731,2080,2482,
#Deleted in new
chr14_KZ208920v1_fix	416165	418684	chr14_KZ208920v1_fix:416165-418684	0	+	416572	418259	8553170	4	106,368,128,39,	0,194,2078,2480,
#Deleted in new
chr14_KZ208920v1_fix	416184	418387	chr14_KZ208920v1_fix:416184-418387	0	+	416184	416184	8553170	5	87,11,207,73,144,	0,175,336,1765,2059,
#Deleted in new
chr14_KZ208920v1_fix	416185	419501	chr14_KZ208920v1_fix:416185-419501	0	+	416185	416185	8553170	3	86,368,136,	0,174,3180,
#Deleted in new
chr14_KZ208920v1_fix	416186	419094	chr14_KZ208920v1_fix:416186-419094	0	+	416572	418259	8553170	5	85,207,128,65,62,	0,334,2057,2459,2846,
#Deleted in new
chr14_KZ208920v1_fix	416202	419083	chr14_KZ208920v1_fix:416202-419083	0	+	416572	419083	8553170	7	69,11,184,73,128,65,51,	0,157,318,1747,2041,2443,2830,
#Deleted in new
chr14_KZ208920v1_fix	416215	418696	chr14_KZ208920v1_fix:416215-418696	0	+	416572	418696	8553170	5	56,207,128,128,51,	0,305,1679,2028,2430,
#Deleted in new
chr14_KZ208920v1_fix	416223	418329	chr14_KZ208920v1_fix:416223-418329	0	+	416572	418329	8553170	4	48,368,73,86,	0,136,1726,2020,
#Deleted in new
chr14_KZ208920v1_fix	416252	418022	chr14_KZ208920v1_fix:416252-418022	0	+	416252	416252	8553170	3	19,368,57,	0,107,1713,
#Deleted in new
chr14_KZ208920v1_fix	416252	425007	chr14_KZ208920v1_fix:416252-425007	0	+	416572	417978	8553170	15	19,345,128,128,65,101,147,55,69,58,186,154,153,107,855,	0,107,1642,1991,2393,2780,3113,3475,3870,4284,4436,5563,6090,7696,7900,
#Deleted in new
chr14_KZ208920v1_fix	416260	418019	chr14_KZ208920v1_fix:416260-418019	0	+	416572	418019	8553170	2	467,125,	0,1634,
#Deleted in new
chr14_KZ208920v1_fix	416292	418679	chr14_KZ208920v1_fix:416292-418679	0	+	416572	417978	8553170	5	78,184,128,128,34,	0,228,1602,1951,2353,
#Deleted in new
chr14_KZ208920v1_fix	416295	418308	chr14_KZ208920v1_fix:416295-418308	0	+	416572	418308	8553170	3	409,73,65,	0,1654,1948,
#Deleted in new
chr14_KZ208920v1_fix	416303	425007	chr14_KZ208920v1_fix:416303-425007	1	+	416572	424287	789624	15	67,184,73,128,65,101,147,55,69,58,186,154,153,107,855,	0,217,1646,1940,2342,2729,3062,3424,3819,4233,4385,5512,6039,7645,7849,
#Deleted in new
chr14_KZ208920v1_fix	416303	418333	chr14_KZ208920v1_fix:416303-418333	0	+	416572	418333	8553170	3	424,73,90,	0,1646,1940,
#Deleted in new
chr14_KZ208920v1_fix	416303	418662	chr14_KZ208920v1_fix:416303-418662	0	+	416572	418662	8553170	5	67,235,128,128,17,	0,189,1591,1940,2342,
#Deleted in new
chr14_KZ208920v1_fix	416303	424774	chr14_KZ208920v1_fix:416303-424774	2	+	416572	418703	789624	14	424,73,128,65,101,147,55,69,58,186,154,153,107,622,	0,1646,1940,2342,2729,3062,3424,3819,4233,4385,5512,6039,7645,7849,
#Deleted in new
chr14_KZ208920v1_fix	416305	419076	chr14_KZ208920v1_fix:416305-419076	0	+	416572	418259	8553170	4	422,128,65,44,	0,1938,2340,2727,
#Deleted in new
chr14_KZ208920v1_fix	416351	424959	chr14_KZ208920v1_fix:416351-424959	1	+	417974	424287	789624	13	376,128,128,101,147,55,69,58,186,154,153,107,807,	0,1543,1892,2681,3014,3376,3771,4185,4337,5464,5991,7597,7801,
#Deleted in new
chr14_KZ208920v1_fix	418311	420380	chr14_KZ208920v1_fix:418311-420380	0	+	418311	418311	8553170	6	60,65,101,147,55,258,	0,334,721,1054,1416,1811,
#Deleted in new
chr14_KZ208920v1_fix	419520	425008	chr14_KZ208920v1_fix:419520-425008	0	+	419520	419520	8553170	5	1074,186,154,153,1060,	0,1168,2295,2822,4428,
#Deleted in new
chr14_KZ208920v1_fix	420123	424340	chr14_KZ208920v1_fix:420123-424340	0	+	420123	424127	8553170	6	68,58,186,154,153,392,	0,413,565,1692,2219,3825,
#Deleted in new
chr14_KZ208920v1_fix	421933	432807	chr14_KZ208920v1_fix:421933-432807	3	+	421933	432807	8553170	4	36,153,107,554,	0,409,2015,10320,
#Deleted in new
chr14_KZ208920v1_fix	421936	423152	chr14_KZ208920v1_fix:421936-423152	0	+	421936	421936	8553170	2	33,810,	0,406,
#Deleted in new
chr14_KZ208920v1_fix	432252	433827	chr14_KZ208920v1_fix:432252-433827	3	+	432541	433801	789624	2	555,639,	0,936,
#Deleted in new
chr14_KZ208920v1_fix	433027	433827	chr14_KZ208920v1_fix:433027-433827	1	+	433510	433801	789624	1	800,	0,
#Deleted in new
chr14_KZ208920v1_fix	437135	439945	chr14_KZ208920v1_fix:437135-439945	3	+	437240	439794	0	11	144,33,63,111,46,98,69,68,55,87,232,	0,827,985,1163,1362,1542,1891,2038,2187,2316,2578,
#Deleted in new
chr14_KZ208920v1_fix	437140	439937	chr14_KZ208920v1_fix:437140-439937	1	+	439191	439794	8553170	11	179,33,63,111,46,98,69,68,55,87,224,	0,822,980,1158,1357,1537,1886,2033,2182,2311,2573,
#Deleted in new
chr14_KZ208920v1_fix	437174	439277	chr14_KZ208920v1_fix:437174-439277	0	+	437174	437174	8553170	5	105,447,46,98,251,	0,788,1323,1503,1852,
#Deleted in new
chr14_KZ208920v1_fix	437174	439765	chr14_KZ208920v1_fix:437174-439765	0	+	437174	437174	8553170	10	105,33,63,111,46,98,215,55,87,52,	0,788,946,1124,1323,1503,1852,2148,2277,2539,
#Deleted in new
chr14_KZ208920v1_fix	437177	439942	chr14_KZ208920v1_fix:437177-439942	1	+	437240	439622	0	10	102,33,63,111,46,98,69,68,55,491,	0,785,943,1121,1320,1500,1849,1996,2145,2274,
#Deleted in new
chr14_KZ208920v1_fix	437204	439945	chr14_KZ208920v1_fix:437204-439945	1	+	437240	439738	0	11	75,33,63,111,46,98,69,68,55,95,232,	0,758,916,1094,1293,1473,1822,1969,2118,2247,2509,
#Deleted in new
chr14_KZ208920v1_fix	437205	438739	chr14_KZ208920v1_fix:437205-438739	0	+	437205	437205	8553170	6	74,120,63,111,46,62,	0,670,915,1093,1292,1472,
#Deleted in new
chr14_KZ208920v1_fix	438375	439937	chr14_KZ208920v1_fix:438375-439937	0	+	438375	438375	8553170	7	34,46,98,215,59,87,224,	0,122,302,651,947,1076,1338,
#Deleted in new
chr14_KZ208920v1_fix	438497	439937	chr14_KZ208920v1_fix:438497-439937	0	+	438497	439456	8553170	7	46,98,69,68,59,87,224,	0,180,529,676,825,954,1216,
#Deleted in new
chr14_KZ208920v1_fix	438497	439882	chr14_KZ208920v1_fix:438497-439882	0	+	438497	438497	8553170	4	46,98,69,709,	0,180,529,676,
#Deleted in new
chr14_KZ208920v1_fix	439936	440501	chr14_KZ208920v1_fix:439936-440501	0	-	439936	439936	8553170	1	565,	0,
#Deleted in new
chr14_KZ208920v1_fix	439942	442563	chr14_KZ208920v1_fix:439942-442563	1	-	439987	442282	789624	5	232,95,70,77,479,	0,395,580,1924,2142,
#Deleted in new
chr14_KZ208920v1_fix	439942	442548	chr14_KZ208920v1_fix:439942-442548	1	-	439987	440645	789624	5	232,95,245,77,223,	0,395,580,1924,2383,
#Deleted in new
chr14_KZ208920v1_fix	439942	442566	chr14_KZ208920v1_fix:439942-442566	3	-	439987	442282	789624	6	232,95,70,77,210,151,	0,395,580,1924,2142,2473,
#Deleted in new
chr14_KZ208920v1_fix	440107	442465	chr14_KZ208920v1_fix:440107-442465	0	-	440784	442282	8553170	6	67,95,272,77,210,50,	0,230,415,1759,1977,2308,
#Deleted in new
chr14_KZ208920v1_fix	440366	440986	chr14_KZ208920v1_fix:440366-440986	0	-	440366	440366	8553170	2	66,464,	0,156,
#Deleted in new
chr14_KZ208920v1_fix	440422	441422	chr14_KZ208920v1_fix:440422-441422	3	+	440422	440422	8553170	2	32,715,	0,285,
#Deleted in new
chr14_KZ208920v1_fix	440522	442531	chr14_KZ208920v1_fix:440522-442531	0	-	440522	440522	8553170	3	245,77,447,	0,1344,1562,
#Deleted in new
chr14_KZ208920v1_fix	444339	444930	chr14_KZ208920v1_fix:444339-444930	0	-	444339	444339	8553170	2	128,368,	0,223,
#Deleted in new
chr14_KZ208920v1_fix	444342	447624	chr14_KZ208920v1_fix:444342-447624	1	-	444386	447559	8553170	11	125,87,55,68,69,127,47,87,63,33,113,	0,220,610,827,1035,1693,1862,2014,2345,2843,3169,
#Deleted in new
chr14_KZ208920v1_fix	444342	448199	chr14_KZ208920v1_fix:444342-448199	3	-	444386	447559	789624	11	125,87,55,68,69,98,31,87,63,33,688,	0,220,610,827,1035,1693,1878,2014,2345,2843,3169,
#Deleted in new
chr14_KZ208920v1_fix	444342	447583	chr14_KZ208920v1_fix:444342-447583	1	-	444386	447559	8553170	10	125,87,55,68,69,98,31,87,63,72,	0,220,610,827,1035,1693,1878,2014,2345,3169,
#Deleted in new
chr14_KZ208920v1_fix	444343	447557	chr14_KZ208920v1_fix:444343-447557	0	-	444343	444343	8553170	10	124,87,68,69,98,31,87,63,33,46,	0,219,826,1034,1692,1877,2013,2344,2842,3168,
#Deleted in new
chr14_KZ208920v1_fix	444344	444987	chr14_KZ208920v1_fix:444344-444987	0	-	444344	444344	8553170	1	643,	0,
#Deleted in new
chr14_KZ208920v1_fix	444359	447216	chr14_KZ208920v1_fix:444359-447216	0	-	444359	444359	8553170	8	108,87,55,68,756,31,87,529,	0,203,593,810,1018,1861,1997,2328,
#Deleted in new
chr14_KZ208920v1_fix	444382	448213	chr14_KZ208920v1_fix:444382-448213	0	-	446835	447559	8553170	11	85,87,55,68,69,98,31,87,187,33,702,	0,180,570,787,995,1653,1838,1974,2305,2803,3129,
#Deleted in new
chr14_KZ208920v1_fix	444384	448236	chr14_KZ208920v1_fix:444384-448236	0	-	444384	444384	8553170	7	83,87,55,68,874,862,725,	0,178,568,785,993,1972,3127,
#Deleted in new
chr14_KZ208920v1_fix	444466	444543	chr14_KZ208920v1_fix:444466-444543	3	-	444466	444466	789624	1	77,	0,
#Deleted in new
chr14_KZ208920v1_fix	444571	447569	chr14_KZ208920v1_fix:444571-447569	0	-	446420	447559	8553170	10	78,55,68,69,98,31,87,43,33,58,	0,381,598,806,1464,1649,1785,2116,2614,2940,
#Deleted in new
chr14_KZ208920v1_fix	445011	445635	chr14_KZ208920v1_fix:445011-445635	0	-	445011	445011	8553170	2	226,258,	0,366,
#Deleted in new
chr14_KZ208920v1_fix	445180	447292	chr14_KZ208920v1_fix:445180-447292	0	-	445180	446251	8553170	7	57,69,98,31,87,63,107,	0,197,855,1040,1176,1507,2005,
#Deleted in new
chr14_KZ208920v1_fix	445777	447556	chr14_KZ208920v1_fix:445777-447556	0	-	445777	445777	8553170	5	474,87,63,33,45,	0,579,910,1408,1734,
#Deleted in new
chr14_KZ208920v1_fix	446111	447599	chr14_KZ208920v1_fix:446111-447599	0	-	446111	446111	8553170	3	639,33,88,	0,1074,1400,
#Deleted in new
chr14_KZ208920v1_fix	446147	447574	chr14_KZ208920v1_fix:446147-447574	0	-	446147	446147	8553170	4	104,87,531,63,	0,209,540,1364,
#Deleted in new
chr14_KZ208920v1_fix	446718	447607	chr14_KZ208920v1_fix:446718-447607	0	-	446718	446718	8553170	3	171,33,96,	0,467,793,
#Deleted in new
chr14_KZ208920v1_fix	446835	447624	chr14_KZ208920v1_fix:446835-447624	1	-	446835	447559	8553170	3	39,33,113,	0,350,676,
#Deleted in new
chr14_KZ208920v1_fix	447660	448845	chr14_KZ208920v1_fix:447660-448845	0	+	448676	448845	8553170	2	135,415,	0,770,
#Deleted in new
chr14_KZ208920v1_fix	447662	450465	chr14_KZ208920v1_fix:447662-450465	0	+	449778	450465	8553170	6	38,147,156,60,76,82,	0,1291,1573,1957,2116,2721,
#Deleted in new
chr14_KZ208920v1_fix	447663	449662	chr14_KZ208920v1_fix:447663-449662	0	+	447663	447663	8553170	5	132,59,147,156,43,	0,1146,1290,1572,1956,
#Deleted in new
chr14_KZ208920v1_fix	447699	450363	chr14_KZ208920v1_fix:447699-450363	0	+	447699	447699	8553170	6	96,147,156,60,76,39,	0,1254,1536,1920,2079,2625,
#Deleted in new
chr14_KZ208920v1_fix	447717	451232	chr14_KZ208920v1_fix:447717-451232	0	+	449778	451232	8553170	7	78,147,156,60,76,178,194,	0,1236,1518,1902,2061,2666,3321,
#Deleted in new
chr14_KZ208920v1_fix	447728	449634	chr14_KZ208920v1_fix:447728-449634	0	+	448676	449634	8553170	5	67,193,147,156,15,	0,947,1225,1507,1891,
#Deleted in new
chr14_KZ208920v1_fix	447787	448548	chr14_KZ208920v1_fix:447787-448548	0	-	447787	447787	8553170	2	412,48,	0,713,
#Deleted in new
chr14_KZ208920v1_fix	447852	450409	chr14_KZ208920v1_fix:447852-450409	0	+	447852	447852	8553170	6	33,147,156,60,76,85,	0,1101,1383,1767,1926,2472,
#Deleted in new
chr14_KZ208920v1_fix	447854	450489	chr14_KZ208920v1_fix:447854-450489	0	+	449778	450489	8553170	6	31,147,156,60,76,106,	0,1099,1381,1765,1924,2529,
#Deleted in new
chr14_KZ208920v1_fix	447864	461637	chr14_KZ208920v1_fix:447864-461637	3	+	449413	461551	0	21	21,147,220,60,76,178,388,291,249,186,207,174,99,90,115,119,114,58,97,169,140,	0,1089,1371,1755,1914,2519,3174,3711,4244,4598,4899,8270,8527,8716,10403,10633,11011,11255,12977,13352,13633,
#Deleted in new
chr14_KZ208920v1_fix	448356	461639	chr14_KZ208920v1_fix:448356-461639	1	+	448676	461551	0	21	512,147,156,60,76,178,388,291,249,186,207,174,99,90,115,119,114,58,97,169,142,	0,597,879,1263,1422,2027,2682,3219,3752,4106,4407,7778,8035,8224,9911,10141,10519,10763,12485,12860,13141,
#Deleted in new
chr14_KZ208920v1_fix	448477	449312	chr14_KZ208920v1_fix:448477-449312	0	+	448477	448477	8553170	3	391,86,77,	0,476,758,
#Deleted in new
chr14_KZ208920v1_fix	448477	450403	chr14_KZ208920v1_fix:448477-450403	0	+	449778	450403	8553170	6	92,147,156,60,76,20,	0,476,758,1142,1301,1906,
#Deleted in new
chr14_KZ208920v1_fix	448477	461638	chr14_KZ208920v1_fix:448477-461638	0	+	448676	452878	8553170	14	391,23,33,207,174,99,90,89,119,114,58,97,169,141,	0,476,4138,4286,7657,7914,8103,9816,10020,10398,10642,12364,12739,13020,
#Deleted in new
chr14_KZ208920v1_fix	448693	450128	chr14_KZ208920v1_fix:448693-450128	0	+	448693	448693	8553170	5	175,147,156,60,350,	0,260,542,926,1085,
#Deleted in new
chr14_KZ208920v1_fix	448953	451269	chr14_KZ208920v1_fix:448953-451269	0	+	448953	450474	8553170	6	147,156,60,76,107,231,	0,282,666,825,1501,2085,
#Deleted in new
chr14_KZ208920v1_fix	449059	461632	chr14_KZ208920v1_fix:449059-461632	0	+	449059	461551	8553170	20	41,156,60,76,178,388,291,81,186,207,174,99,90,115,119,114,58,97,169,135,	0,176,560,719,1324,1979,2516,3217,3403,3704,7075,7332,7521,9208,9438,9816,10060,11782,12157,12438,
#Deleted in new
chr14_KZ208920v1_fix	449425	451225	chr14_KZ208920v1_fix:449425-451225	0	+	449425	449425	8553170	5	30,60,76,178,187,	0,194,353,958,1613,
#Deleted in new
chr14_KZ208920v1_fix	451978	461633	chr14_KZ208920v1_fix:451978-461633	0	+	451978	451978	8553170	13	379,186,207,174,99,90,115,119,114,58,97,169,136,	0,484,785,4156,4413,4602,6289,6519,6897,7141,8863,9238,9519,
#Deleted in new
chr14_KZ208920v1_fix	452195	468380	chr14_KZ208920v1_fix:452195-468380	3	+	452195	461551	8553170	21	162,186,207,174,99,90,115,119,114,58,97,169,819,181,184,131,82,72,342,116,1281,	0,267,568,3939,4196,4385,6072,6302,6680,6924,8646,9021,9302,10926,11748,12160,12660,12845,13396,14629,14904,
#Deleted in new
chr14_KZ208920v1_fix	455937	458313	chr14_KZ208920v1_fix:455937-458313	0	+	456134	458313	8553170	4	371,99,90,46,	0,454,643,2330,
#Deleted in new
chr14_KZ208920v1_fix	456599	458886	chr14_KZ208920v1_fix:456599-458886	0	+	456599	456599	8553170	3	71,115,389,	0,1668,1898,
#Deleted in new
chr14_KZ208920v1_fix	456644	461632	chr14_KZ208920v1_fix:456644-461632	0	+	456644	460856	8553170	8	26,115,119,114,33,97,169,135,	0,1623,1853,2231,2500,4197,4572,4853,
#Deleted in new
chr14_KZ208920v1_fix	458268	461583	chr14_KZ208920v1_fix:458268-461583	0	+	458268	461242	8553170	6	114,119,114,58,169,86,	0,229,607,851,2948,3229,
#Deleted in new
chr14_KZ208920v1_fix	458497	461633	chr14_KZ208920v1_fix:458497-461633	0	+	458497	461551	8553170	5	119,58,97,169,136,	0,622,2344,2719,3000,
#Deleted in new
chr14_KZ208920v1_fix	459580	459700	chr14_KZ208920v1_fix:459580-459700	7	+	459580	459580	16724991	1	120,	0,
#Deleted in new
chr14_KZ208920v1_fix	460765	461633	chr14_KZ208920v1_fix:460765-461633	0	+	460765	460765	8553170	3	173,169,136,	0,451,732,
#Deleted in new
chr14_KZ208920v1_fix	461088	461520	chr14_KZ208920v1_fix:461088-461520	0	+	461088	461088	8553170	2	297,23,	0,409,
#Deleted in new
chr14_KZ208920v1_fix	462030	467543	chr14_KZ208920v1_fix:462030-467543	3	+	463122	467174	789624	9	286,181,184,131,82,72,342,116,444,	0,1091,1913,2325,2825,3010,3561,4794,5069,
#Deleted in new
chr14_KZ208920v1_fix	462250	467370	chr14_KZ208920v1_fix:462250-467370	1	+	464069	467233	8553170	9	66,184,131,82,72,342,127,116,271,	0,1693,2105,2605,2790,3341,3784,4574,4849,
#Deleted in new
chr14_KZ208920v1_fix	462254	466880	chr14_KZ208920v1_fix:462254-466880	0	+	463122	463960	8553170	8	62,137,184,131,82,72,342,56,	0,867,1689,2101,2601,2786,3337,4570,
#Deleted in new
chr14_KZ208920v1_fix	462267	464259	chr14_KZ208920v1_fix:462267-464259	0	+	462267	462267	8553170	3	49,181,316,	0,854,1676,
#Deleted in new
chr14_KZ208920v1_fix	462267	464564	chr14_KZ208920v1_fix:462267-464564	0	+	462267	462267	8553170	4	49,181,184,209,	0,854,1676,2088,
#Deleted in new
chr14_KZ208920v1_fix	462267	467232	chr14_KZ208920v1_fix:462267-467232	0	+	462267	462267	8553170	8	49,181,184,131,82,893,116,133,	0,854,1676,2088,2588,2773,4557,4832,
#Deleted in new
chr14_KZ208920v1_fix	462270	465081	chr14_KZ208920v1_fix:462270-465081	0	+	463122	465081	8553170	5	46,181,184,131,41,	0,851,1673,2085,2770,
#Deleted in new
chr14_KZ208920v1_fix	462278	465717	chr14_KZ208920v1_fix:462278-465717	0	+	463122	465717	8553170	7	38,181,184,131,82,72,153,	0,843,1665,2077,2577,2762,3286,
#Deleted in new
chr14_KZ208920v1_fix	462281	463694	chr14_KZ208920v1_fix:462281-463694	0	+	462281	462281	8553170	2	35,573,	0,840,
#Deleted in new
chr14_KZ208920v1_fix	462294	464743	chr14_KZ208920v1_fix:462294-464743	0	+	463122	463960	8553170	4	22,137,184,388,	0,827,1649,2061,
#Deleted in new
chr14_KZ208920v1_fix	463973	467202	chr14_KZ208920v1_fix:463973-467202	0	+	463973	467174	8553170	6	154,131,82,72,116,103,	0,382,882,1067,2851,3126,
#Deleted in new
chr14_KZ208920v1_fix	464589	465265	chr14_KZ208920v1_fix:464589-465265	0	+	464589	464589	8553170	2	348,225,	0,451,
#Deleted in new
chr14_KZ208920v1_fix	464852	465898	chr14_KZ208920v1_fix:464852-465898	0	+	464852	464852	8553170	2	260,307,	0,739,
#Deleted in new
chr14_KZ208920v1_fix	465507	466427	chr14_KZ208920v1_fix:465507-466427	0	+	465507	465507	8553170	2	426,393,	0,527,
#Deleted in new
chr14_KZ208920v1_fix	466736	467543	chr14_KZ208920v1_fix:466736-467543	0	+	466736	466736	8553170	2	204,444,	0,363,
#Deleted in new
chr14_KZ208920v1_fix	472830	481235	chr14_KZ208920v1_fix:472830-481235	3	+	473530	481073	789624	20	513,142,69,143,73,121,82,80,82,31,77,50,132,67,140,49,67,132,107,248,	0,614,860,1046,1273,1438,3690,4969,5288,5500,5612,5856,6238,6753,6924,7232,7544,7742,7947,8157,
#Deleted in new
chr14_KZ208920v1_fix	472992	473974	chr14_KZ208920v1_fix:472992-473974	0	+	473530	473974	8553170	4	351,117,69,98,	0,477,698,884,
#Deleted in new
chr14_KZ208920v1_fix	473002	481232	chr14_KZ208920v1_fix:473002-481232	1	+	473530	481073	789624	19	584,69,143,73,121,82,80,82,31,77,50,132,67,140,49,67,132,107,245,	0,688,874,1101,1266,3518,4797,5116,5328,5440,5684,6066,6581,6752,7060,7372,7570,7775,7985,
#Deleted in new
chr14_KZ208920v1_fix	473112	481232	chr14_KZ208920v1_fix:473112-481232	0	+	473112	473112	8553170	17	474,69,143,73,121,82,80,82,31,758,67,140,49,67,132,107,245,	0,578,764,991,1156,3408,4687,5006,5218,5330,6471,6642,6950,7262,7460,7665,7875,
#Deleted in new
chr14_KZ208920v1_fix	473259	474141	chr14_KZ208920v1_fix:473259-474141	0	+	473259	473259	8553170	3	327,69,265,	0,431,617,
#Deleted in new
chr14_KZ208920v1_fix	473588	477862	chr14_KZ208920v1_fix:473588-477862	0	+	474162	477862	8553170	6	171,143,73,121,82,63,	0,288,515,680,2932,4211,
#Deleted in new
chr14_KZ208920v1_fix	473726	478728	chr14_KZ208920v1_fix:473726-478728	0	+	473726	473726	8553170	7	33,300,121,82,80,82,398,	0,150,542,2794,4073,4392,4604,
#Deleted in new
chr14_KZ208920v1_fix	476295	478896	chr14_KZ208920v1_fix:476295-478896	0	+	476295	476295	8553170	4	307,80,82,566,	0,1504,1823,2035,
#Deleted in new
chr14_KZ208920v1_fix	478487	479078	chr14_KZ208920v1_fix:478487-479078	0	+	478487	478487	8553170	2	32,392,	0,199,
#Deleted in new
chr14_KZ208920v1_fix	479103	481232	chr14_KZ208920v1_fix:479103-481232	0	+	479103	481232	8553170	7	97,67,140,49,67,132,455,	0,480,651,959,1271,1469,1674,
#Deleted in new
chr14_KZ208920v1_fix	479160	480666	chr14_KZ208920v1_fix:479160-480666	0	+	479160	479160	8553170	5	40,311,49,67,94,	0,423,902,1214,1412,
#Deleted in new
chr14_KZ208920v1_fix	480413	481231	chr14_KZ208920v1_fix:480413-481231	0	+	480413	480413	8553170	4	28,132,107,227,	0,159,364,591,
#Deleted in new
chr14_KZ208920v1_fix	480505	481013	chr14_KZ208920v1_fix:480505-481013	0	+	480505	480505	8553170	2	379,26,	0,482,
#Deleted in new
chr14_KZ208920v1_fix	481196	489800	chr14_KZ208920v1_fix:481196-489800	0	-	481196	481196	8553170	29	354,70,105,133,209,126,51,194,106,58,78,116,112,121,114,114,130,109,110,54,165,84,102,66,180,130,42,295,104,	0,470,1294,1492,1736,2059,2573,2757,3031,3237,3371,3564,3779,4079,4431,4648,4964,5240,5642,5910,6068,6489,6659,6866,7181,7448,7997,8125,8500,
#Deleted in new
chr14_KZ208920v1_fix	481196	489942	chr14_KZ208920v1_fix:481196-489942	1	-	481419	489765	0	30	354,70,105,133,209,126,51,194,106,58,78,116,112,121,114,114,130,109,110,54,165,84,102,66,180,130,42,80,87,246,	0,470,1294,1492,1736,2059,2573,2757,3031,3237,3371,3564,3779,4079,4431,4648,4964,5240,5642,5910,6068,6489,6659,6866,7181,7448,7997,8125,8333,8500,
#Deleted in new
chr14_KZ208920v1_fix	481197	489775	chr14_KZ208920v1_fix:481197-489775	0	-	481197	481197	8553170	29	353,70,105,133,209,126,51,194,106,58,78,116,112,121,114,114,130,109,110,77,165,84,102,66,180,130,42,80,246,	0,469,1293,1491,1735,2058,2572,2756,3030,3236,3370,3563,3778,4078,4430,4647,4963,5239,5641,5909,6067,6488,6658,6865,7180,7447,7996,8124,8332,
#Deleted in new
chr14_KZ208920v1_fix	481197	485653	chr14_KZ208920v1_fix:481197-485653	0	-	481419	485653	8553170	15	353,76,105,133,209,126,51,194,106,58,78,116,112,121,26,	0,463,1293,1491,1735,2058,2572,2756,3030,3236,3370,3563,3778,4078,4430,
#Deleted in new
chr14_KZ208920v1_fix	481197	489800	chr14_KZ208920v1_fix:481197-489800	0	-	488763	489765	8553170	30	353,70,105,133,209,146,51,194,106,58,78,116,112,121,114,114,130,109,110,54,165,84,102,66,180,147,42,80,87,104,	0,469,1293,1491,1735,2058,2572,2756,3030,3236,3370,3563,3778,4078,4430,4647,4963,5239,5641,5909,6067,6488,6658,6865,7180,7447,7996,8124,8332,8499,
#Deleted in new
chr14_KZ208920v1_fix	481203	489775	chr14_KZ208920v1_fix:481203-489775	0	-	488468	489765	8553170	30	347,70,105,133,209,126,51,194,106,58,78,116,112,121,114,114,130,109,110,54,165,84,102,66,180,130,42,48,87,79,	0,463,1287,1485,1729,2052,2566,2750,3024,3230,3364,3557,3772,4072,4424,4641,4957,5233,5635,5903,6061,6482,6652,6859,7174,7441,7990,8118,8326,8493,
#Deleted in new
chr14_KZ208920v1_fix	481282	489847	chr14_KZ208920v1_fix:481282-489847	0	-	483023	489765	8553170	30	268,70,105,133,209,146,51,194,106,58,78,116,112,121,114,114,130,109,110,54,165,84,102,66,180,130,42,80,87,151,	0,384,1208,1406,1650,1973,2487,2671,2945,3151,3285,3478,3693,3993,4345,4562,4878,5154,5556,5824,5982,6403,6573,6780,7095,7362,7911,8039,8247,8414,
#Deleted in new
chr14_KZ208920v1_fix	481282	489847	chr14_KZ208920v1_fix:481282-489847	0	-	481282	481282	8553170	29	268,70,105,133,209,126,51,186,106,58,78,116,112,121,114,114,130,109,110,54,165,84,102,66,180,130,42,80,318,	0,384,1208,1406,1650,1973,2487,2671,2945,3151,3285,3478,3693,3993,4345,4562,4878,5154,5556,5824,5982,6403,6573,6780,7095,7362,7911,8039,8247,
#Deleted in new
chr14_KZ208920v1_fix	481341	484250	chr14_KZ208920v1_fix:481341-484250	0	-	481419	484250	8553170	8	209,70,133,209,126,51,194,23,	0,325,1347,1591,1914,2428,2612,2886,
#Deleted in new
chr14_KZ208920v1_fix	481372	491394	chr14_KZ208920v1_fix:481372-491394	3	-	490392	491394	8553170	31	178,70,105,133,209,126,51,194,106,58,78,116,112,121,114,114,130,109,110,54,165,84,102,66,180,130,42,80,87,1090,37,	0,294,1118,1316,1560,1883,2397,2581,2855,3061,3195,3388,3603,3903,4255,4472,4788,5064,5466,5734,5892,6313,6483,6690,7005,7272,7821,7949,8157,8324,9985,
#Deleted in new
chr14_KZ208920v1_fix	481419	489775	chr14_KZ208920v1_fix:481419-489775	0	-	481419	481419	8553170	28	131,70,105,133,209,126,51,194,137,212,116,112,121,114,130,109,110,54,165,84,102,66,180,130,42,80,87,79,	0,247,1071,1269,1513,1836,2350,2534,2808,3014,3341,3556,3856,4208,4741,5017,5419,5687,5845,6266,6436,6643,6958,7225,7774,7902,8110,8277,
#Deleted in new
chr14_KZ208920v1_fix	483513	484450	chr14_KZ208920v1_fix:483513-484450	0	-	483513	483513	8553170	4	307,194,106,17,	0,440,714,920,
#Deleted in new
chr14_KZ208920v1_fix	483794	484628	chr14_KZ208920v1_fix:483794-484628	0	-	483794	483794	8553170	2	26,675,	0,159,
#Deleted in new
chr14_KZ208920v1_fix	488064	489822	chr14_KZ208920v1_fix:488064-489822	0	-	488538	489765	8553170	6	64,180,42,80,87,126,	0,313,1129,1257,1465,1632,
#Deleted in new
chr14_KZ208920v1_fix	488468	489047	chr14_KZ208920v1_fix:488468-489047	0	-	488468	488468	8553170	2	89,403,	0,176,
#Deleted in new
chr14_KZ208920v1_fix	488508	489775	chr14_KZ208920v1_fix:488508-489775	0	-	488508	488508	8553170	5	266,42,80,87,79,	0,685,813,1021,1188,
#Deleted in new
chr14_KZ208920v1_fix	488530	489799	chr14_KZ208920v1_fix:488530-489799	0	-	488530	488530	8553170	5	27,130,208,87,103,	0,114,663,999,1166,
#Deleted in new
chr14_KZ208920v1_fix	488538	489765	chr14_KZ208920v1_fix:488538-489765	1	-	488538	489765	8553170	5	19,42,80,87,69,	0,655,783,991,1158,
#Deleted in new
chr14_KZ208920v1_fix	488923	489775	chr14_KZ208920v1_fix:488923-489775	2	-	488923	488923	8553170	4	312,80,87,79,	0,398,606,773,
#Deleted in new
chr14_KZ208920v1_fix	488982	489800	chr14_KZ208920v1_fix:488982-489800	0	-	489549	489765	8553170	4	253,80,98,104,	0,339,547,714,
#Deleted in new
chr14_KZ208920v1_fix	489079	489775	chr14_KZ208920v1_fix:489079-489775	0	-	489079	489079	8553170	3	156,295,79,	0,242,617,
#Deleted in new
chr14_KZ208920v1_fix	489136	489789	chr14_KZ208920v1_fix:489136-489789	0	-	489136	489136	8553170	2	480,93,	0,560,
#Deleted in new
chr14_KZ208920v1_fix	490120	496665	chr14_KZ208920v1_fix:490120-496665	1	-	490392	495997	789624	6	666,274,186,622,362,342,	0,1237,3028,3505,5532,6203,
#Deleted in new
chr14_KZ208920v1_fix	490126	496386	chr14_KZ208920v1_fix:490126-496386	1	-	490392	495997	8553170	5	660,223,186,622,734,	0,1282,3022,3499,5526,
#Deleted in new
chr14_KZ208920v1_fix	490134	514451	chr14_KZ208920v1_fix:490134-514451	3	-	490392	514417	8553170	10	652,274,186,622,362,136,115,178,150,65,	0,1223,3014,3491,5518,21191,21497,22258,22523,24252,
#Deleted in new
chr14_KZ208920v1_fix	490169	496431	chr14_KZ208920v1_fix:490169-496431	0	-	491459	495997	8553170	6	617,212,186,622,362,108,	0,1188,2979,3456,5483,6154,
#Deleted in new
chr14_KZ208920v1_fix	490378	496615	chr14_KZ208920v1_fix:490378-496615	1	-	490392	495736	789624	6	408,274,186,622,156,292,	0,979,2770,3247,5274,5945,
#Deleted in new
chr14_KZ208920v1_fix	490514	496395	chr14_KZ208920v1_fix:490514-496395	0	-	490514	495997	8553170	4	272,56,105,72,	0,843,5410,5809,
#Deleted in new
chr14_KZ208920v1_fix	491019	496596	chr14_KZ208920v1_fix:491019-496596	1	-	491314	495997	789624	5	612,186,622,362,273,	0,2129,2606,4633,5304,
#Deleted in new
chr14_KZ208920v1_fix	492711	494091	chr14_KZ208920v1_fix:492711-494091	0	-	492711	492711	8553170	2	623,466,	0,914,
#Deleted in new
chr14_KZ208920v1_fix	493690	496328	chr14_KZ208920v1_fix:493690-496328	0	-	493690	495997	8553170	3	557,362,42,	0,1962,2596,
#Deleted in new
chr14_KZ208920v1_fix	493708	496312	chr14_KZ208920v1_fix:493708-496312	0	-	493708	495736	8553170	3	539,156,26,	0,1944,2578,
#Deleted in new
chr14_KZ208920v1_fix	493820	496562	chr14_KZ208920v1_fix:493820-496562	0	-	493820	495997	8553170	3	427,362,276,	0,1832,2466,
#Deleted in new
chr14_KZ208920v1_fix	493865	496665	chr14_KZ208920v1_fix:493865-496665	2	-	493865	495997	8553170	3	382,362,138,	0,1787,2662,
#Deleted in new
chr14_KZ208920v1_fix	493962	496565	chr14_KZ208920v1_fix:493962-496565	0	-	493962	495997	8553170	3	285,377,242,	0,1690,2361,
#Deleted in new
chr14_KZ208920v1_fix	499410	500068	chr14_KZ208920v1_fix:499410-500068	3	+	499410	499410	8553170	1	658,	0,
#Deleted in new
chr14_KZ208920v1_fix	502589	503789	chr14_KZ208920v1_fix:502589-503789	3	-	502589	502589	8553170	1	1200,	0,
#Deleted in new
chr14_KZ208920v1_fix	506674	509226	chr14_KZ208920v1_fix:506674-509226	0	+	506674	506674	8553170	3	108,1001,285,	0,812,2267,
#Deleted in new
chr14_KZ208920v1_fix	506697	509224	chr14_KZ208920v1_fix:506697-509224	3	+	506901	509124	789624	4	429,215,394,283,	0,789,1396,2244,
#Deleted in new
chr14_KZ208920v1_fix	506705	509181	chr14_KZ208920v1_fix:506705-509181	1	+	507489	509124	789624	4	77,215,364,240,	0,781,1418,2236,
#Deleted in new
chr14_KZ208920v1_fix	506733	509226	chr14_KZ208920v1_fix:506733-509226	1	+	506901	509124	789624	4	393,215,364,285,	0,753,1390,2208,
#Deleted in new
chr14_KZ208920v1_fix	506835	509226	chr14_KZ208920v1_fix:506835-509226	1	+	506901	509124	8553170	2	291,285,	0,2106,
#Deleted in new
chr14_KZ208920v1_fix	506918	509226	chr14_KZ208920v1_fix:506918-509226	0	+	506918	508948	8553170	3	208,215,285,	0,568,2023,
#Deleted in new
chr14_KZ208920v1_fix	508233	509340	chr14_KZ208920v1_fix:508233-509340	0	+	508233	508941	8553170	2	254,471,	0,636,
#Deleted in new
chr14_KZ208920v1_fix	510560	514847	chr14_KZ208920v1_fix:510560-514847	1	-	510854	514546	0	6	353,136,115,178,150,461,	0,765,1071,1832,2097,3826,
#Deleted in new
chr14_KZ208920v1_fix	510601	514467	chr14_KZ208920v1_fix:510601-514467	1	-	510854	512436	8553170	6	312,136,115,178,145,81,	0,724,1030,1791,2056,3785,
#Deleted in new
chr14_KZ208920v1_fix	510623	516952	chr14_KZ208920v1_fix:510623-516952	3	-	510623	510623	8553170	10	290,136,115,178,150,743,86,108,246,56,	0,702,1008,1769,2034,3763,4664,4846,5906,6273,
#Deleted in new
chr14_KZ208920v1_fix	510652	514808	chr14_KZ208920v1_fix:510652-514808	0	-	511737	514546	8553170	6	261,136,115,182,150,422,	0,673,979,1736,2005,3734,
#Deleted in new
chr14_KZ208920v1_fix	510711	514063	chr14_KZ208920v1_fix:510711-514063	0	-	510711	510711	8553170	6	202,136,115,182,150,62,	0,614,920,1677,1946,3290,
#Deleted in new
chr14_KZ208920v1_fix	510837	514466	chr14_KZ208920v1_fix:510837-514466	1	-	510854	514417	0	6	76,136,115,178,150,80,	0,488,794,1555,1820,3549,
#Deleted in new
chr14_KZ208920v1_fix	511325	513682	chr14_KZ208920v1_fix:511325-513682	0	-	511325	513589	8553170	5	136,115,178,150,154,	0,306,1067,1332,2203,
#Deleted in new
chr14_KZ208920v1_fix	511401	511839	chr14_KZ208920v1_fix:511401-511839	0	-	511401	511401	8553170	2	60,208,	0,230,
#Deleted in new
chr14_KZ208920v1_fix	511642	513087	chr14_KZ208920v1_fix:511642-513087	0	-	511642	511642	8553170	3	104,182,430,	0,746,1015,
#Deleted in new
chr14_KZ208920v1_fix	511652	514410	chr14_KZ208920v1_fix:511652-514410	0	-	512479	514410	8553170	4	94,102,150,24,	0,736,1005,2734,
#Deleted in new
chr14_KZ208920v1_fix	512229	514466	chr14_KZ208920v1_fix:512229-514466	2	-	512229	512229	8553170	3	341,150,80,	0,428,2157,
#Deleted in new
chr14_KZ208920v1_fix	512487	514073	chr14_KZ208920v1_fix:512487-514073	0	-	512487	512487	8553170	3	83,150,330,	0,170,1256,
#Deleted in new
chr14_KZ208920v1_fix	513716	516965	chr14_KZ208920v1_fix:513716-516965	0	-	513716	513716	8553170	4	1861,111,61,69,	0,2813,2998,3180,
#Deleted in new
chr14_KZ208920v1_fix	514914	517045	chr14_KZ208920v1_fix:514914-517045	3	-	515001	516933	0	6	215,86,108,111,61,149,	0,373,555,1615,1800,1982,
#Deleted in new
chr14_KZ208920v1_fix	514920	517015	chr14_KZ208920v1_fix:514920-517015	0	-	514920	514920	8553170	4	209,86,108,486,	0,367,549,1609,
#Deleted in new
chr14_KZ208920v1_fix	514920	517043	chr14_KZ208920v1_fix:514920-517043	1	-	515023	516933	0	5	209,54,111,61,147,	0,603,1609,1794,1976,
#Deleted in new
chr14_KZ208920v1_fix	514927	516855	chr14_KZ208920v1_fix:514927-516855	0	-	514927	514927	8553170	4	202,108,111,141,	0,542,1602,1787,
#Deleted in new
chr14_KZ208920v1_fix	514929	516776	chr14_KZ208920v1_fix:514929-516776	0	-	514929	514929	8553170	3	200,54,247,	0,594,1600,
#Deleted in new
chr14_KZ208920v1_fix	514931	516616	chr14_KZ208920v1_fix:514931-516616	0	-	514931	514931	8553170	4	198,134,108,87,	0,308,538,1598,
#Deleted in new
chr14_KZ208920v1_fix	514932	533314	chr14_KZ208920v1_fix:514932-533314	2	-	516572	533245	789624	8	197,86,108,111,38,83,48,87,	0,355,537,1597,3231,4178,4429,18295,
#Deleted in new
chr14_KZ208920v1_fix	515015	516975	chr14_KZ208920v1_fix:515015-516975	0	-	515015	515015	8553170	4	114,108,246,110,	0,454,1514,1850,
#Deleted in new
chr14_KZ208920v1_fix	515073	533330	chr14_KZ208920v1_fix:515073-533330	1	-	515073	533245	789624	7	56,86,108,111,83,48,103,	0,214,396,1456,4037,4288,18154,
#Deleted in new
chr14_KZ208920v1_fix	515301	517048	chr14_KZ208920v1_fix:515301-517048	0	-	515301	515301	8553170	4	72,108,246,152,	0,168,1228,1595,
#Deleted in new
chr14_KZ208920v1_fix	515344	516940	chr14_KZ208920v1_fix:515344-516940	0	-	515344	515344	8553170	3	233,246,44,	0,1185,1552,
#Deleted in new
chr14_KZ208920v1_fix	515349	533263	chr14_KZ208920v1_fix:515349-533263	0	-	516720	533245	789624	7	24,108,111,61,83,48,36,	0,120,1180,1365,3761,4012,17878,
#Deleted in new
chr14_KZ208920v1_fix	515355	533263	chr14_KZ208920v1_fix:515355-533263	0	-	515355	515355	789624	8	18,108,111,61,83,48,216,36,	0,114,1174,1359,3755,4006,17274,17872,
#Deleted in new
chr14_KZ208920v1_fix	515367	517037	chr14_KZ208920v1_fix:515367-517037	0	-	515367	515367	8553170	2	210,508,	0,1162,
#Deleted in new
chr14_KZ208920v1_fix	517829	533432	chr14_KZ208920v1_fix:517829-533432	3	-	518104	533245	0	4	372,83,48,205,	0,1281,1532,15398,
#Deleted in new
chr14_KZ208920v1_fix	517834	533281	chr14_KZ208920v1_fix:517834-533281	0	-	519106	533245	8553170	4	367,157,48,54,	0,1202,1527,15393,
#Deleted in new
chr14_KZ208920v1_fix	517836	532980	chr14_KZ208920v1_fix:517836-532980	0	-	517836	517836	8553170	4	365,83,48,351,	0,1274,1525,14793,
#Deleted in new
chr14_KZ208920v1_fix	517843	533303	chr14_KZ208920v1_fix:517843-533303	0	-	517843	517843	8553170	5	358,83,48,86,76,	0,1267,1518,14786,15384,
#Deleted in new
chr14_KZ208920v1_fix	517973	519704	chr14_KZ208920v1_fix:517973-519704	0	-	517973	517973	8553170	3	228,83,343,	0,1137,1388,
#Deleted in new
chr14_KZ208920v1_fix	517997	533309	chr14_KZ208920v1_fix:517997-533309	0	-	517997	517997	8553170	2	204,82,	0,15230,
#Deleted in new
chr14_KZ208920v1_fix	518693	533332	chr14_KZ208920v1_fix:518693-533332	1	-	519106	533245	8553170	3	500,48,105,	0,668,14534,
#Deleted in new
chr14_KZ208920v1_fix	527582	533333	chr14_KZ208920v1_fix:527582-533333	0	-	527582	527582	8553170	3	2108,86,106,	0,5047,5645,
#Deleted in new
chr14_KZ208920v1_fix	533399	540220	chr14_KZ208920v1_fix:533399-540220	1	+	534231	539756	0	10	426,122,120,84,174,82,107,43,160,654,	0,797,1057,3315,3545,4649,4823,5098,5824,6167,
#Deleted in new
chr14_KZ208920v1_fix	533399	540217	chr14_KZ208920v1_fix:533399-540217	1	+	534231	539756	789624	11	367,122,120,84,78,96,82,107,43,160,651,	0,797,1057,3315,3543,3623,4649,4823,5098,5824,6167,
#Deleted in new
chr14_KZ208920v1_fix	533419	540220	chr14_KZ208920v1_fix:533419-540220	1	+	534231	539756	0	10	347,122,120,84,174,82,107,43,160,654,	0,777,1037,3295,3525,4629,4803,5078,5804,6147,
#Deleted in new
chr14_KZ208920v1_fix	533467	540217	chr14_KZ208920v1_fix:533467-540217	0	+	534231	535090	8553170	10	299,122,120,135,84,174,82,107,43,994,	0,729,989,1617,3247,3477,4581,4755,5030,5756,
#Deleted in new
chr14_KZ208920v1_fix	533612	540185	chr14_KZ208920v1_fix:533612-540185	0	+	534231	536740	8553170	10	213,122,115,84,174,111,107,43,160,619,	0,584,844,3102,3332,4407,4610,4885,5611,5954,
#Deleted in new
chr14_KZ208920v1_fix	533613	540182	chr14_KZ208920v1_fix:533613-540182	1	+	534231	539756	8553170	10	153,122,120,84,75,82,107,43,160,616,	0,583,843,3101,3331,4435,4609,4884,5610,5953,
#Deleted in new
chr14_KZ208920v1_fix	533613	538077	chr14_KZ208920v1_fix:533613-538077	0	+	534231	538077	8553170	6	153,122,120,84,75,29,	0,583,843,3101,3331,4435,
#Deleted in new
chr14_KZ208920v1_fix	533619	534653	chr14_KZ208920v1_fix:533619-534653	0	+	533619	533619	8553170	3	147,122,197,	0,577,837,
#Deleted in new
chr14_KZ208920v1_fix	533628	540217	chr14_KZ208920v1_fix:533628-540217	1	+	534231	539756	8553170	12	138,122,120,74,94,6,87,82,107,43,160,651,	0,568,828,3086,3298,3395,3403,4420,4594,4869,5595,5938,
#Deleted in new
chr14_KZ208920v1_fix	533643	538265	chr14_KZ208920v1_fix:533643-538265	0	+	534231	538265	8553170	8	123,122,120,129,84,174,82,43,	0,553,813,1447,3071,3301,4405,4579,
#Deleted in new
chr14_KZ208920v1_fix	533653	537118	chr14_KZ208920v1_fix:533653-537118	0	+	534231	537118	8553170	5	113,122,108,84,174,	0,543,803,3061,3291,
#Deleted in new
chr14_KZ208920v1_fix	533663	539365	chr14_KZ208920v1_fix:533663-539365	0	+	537115	539365	8553170	7	103,84,174,82,107,43,142,	0,3051,3281,4385,4559,4834,5560,
#Deleted in new
chr14_KZ208920v1_fix	533727	536988	chr14_KZ208920v1_fix:533727-536988	0	+	534531	536988	8553170	4	98,120,84,44,	0,729,2987,3217,
#Deleted in new
chr14_KZ208920v1_fix	533849	540220	chr14_KZ208920v1_fix:533849-540220	3	+	534231	539756	0	10	106,122,120,84,174,82,107,43,160,654,	0,347,607,2865,3095,4199,4373,4648,5374,5717,
#Deleted in new
chr14_KZ208920v1_fix	533870	536794	chr14_KZ208920v1_fix:533870-536794	0	+	533870	533870	8553170	4	85,122,115,80,	0,326,586,2844,
#Deleted in new
chr14_KZ208920v1_fix	533875	538267	chr14_KZ208920v1_fix:533875-538267	0	+	534231	535090	8553170	8	80,122,120,135,84,174,82,45,	0,321,581,1209,2839,3069,4173,4347,
#Deleted in new
chr14_KZ208920v1_fix	533878	540220	chr14_KZ208920v1_fix:533878-540220	1	+	534177	539756	0	9	440,120,84,174,82,107,43,160,654,	0,578,2836,3066,4170,4344,4619,5345,5688,
#Deleted in new
chr14_KZ208920v1_fix	533879	536983	chr14_KZ208920v1_fix:533879-536983	0	+	534177	535090	8553170	5	439,120,135,84,39,	0,577,1205,2835,3065,
#Deleted in new
chr14_KZ208920v1_fix	533895	537043	chr14_KZ208920v1_fix:533895-537043	0	+	534177	536740	8553170	4	423,115,84,99,	0,561,2819,3049,
#Deleted in new
chr14_KZ208920v1_fix	533900	540220	chr14_KZ208920v1_fix:533900-540220	1	+	534177	539756	789624	8	418,120,84,174,82,107,43,997,	0,556,2814,3044,4148,4322,4597,5323,
#Deleted in new
chr14_KZ208920v1_fix	533924	540220	chr14_KZ208920v1_fix:533924-540220	1	+	534177	539756	8553170	9	394,120,84,75,82,107,43,160,654,	0,532,2790,3020,4124,4298,4573,5299,5642,
#Deleted in new
chr14_KZ208920v1_fix	533925	540212	chr14_KZ208920v1_fix:533925-540212	1	+	534231	539756	0	9	30,122,120,174,82,107,43,160,646,	0,271,531,3019,4123,4297,4572,5298,5641,
#Deleted in new
chr14_KZ208920v1_fix	536351	538130	chr14_KZ208920v1_fix:536351-538130	0	+	536351	536351	8553170	3	447,174,111,	0,593,1668,
#Deleted in new
chr14_KZ208920v1_fix	537073	540024	chr14_KZ208920v1_fix:537073-540024	0	+	537073	539677	8553170	6	45,82,107,43,160,420,	0,975,1149,1424,2150,2531,
#Deleted in new
chr14_KZ208920v1_fix	537952	538931	chr14_KZ208920v1_fix:537952-538931	0	+	537952	537952	8553170	3	178,107,434,	0,270,545,
#Deleted in new
chr14_KZ208920v1_fix	538250	539804	chr14_KZ208920v1_fix:538250-539804	0	+	538250	539637	8553170	3	79,43,238,	0,247,1316,
#Deleted in new
chr14_KZ208920v1_fix	539165	539817	chr14_KZ208920v1_fix:539165-539817	0	+	539165	539165	8553170	2	218,251,	0,401,
#Deleted in new
chr14_KZ208920v1_fix	539223	540220	chr14_KZ208920v1_fix:539223-540220	0	+	539223	539982	8553170	3	160,160,337,	0,343,660,
#Deleted in new
chr14_KZ208920v1_fix	539308	540218	chr14_KZ208920v1_fix:539308-540218	0	+	539308	539756	8553170	3	75,215,283,	0,258,627,
#Deleted in new
chr14_KZ208920v1_fix	539356	539778	chr14_KZ208920v1_fix:539356-539778	0	+	539356	539756	8553170	2	27,204,	0,218,
#Deleted in new
chr14_KZ208920v1_fix	539566	540219	chr14_KZ208920v1_fix:539566-540219	0	+	539566	539982	8553170	2	181,336,	0,317,
#Deleted in new
chr14_KZ208920v1_fix	540620	543596	chr14_KZ208920v1_fix:540620-543596	1	-	540774	543310	0	9	289,92,68,457,97,108,102,105,478,	0,421,620,776,1377,1561,2032,2247,2498,
#Deleted in new
chr14_KZ208920v1_fix	540620	541220	chr14_KZ208920v1_fix:540620-541220	0	-	540620	540620	8553170	2	289,179,	0,421,
#Deleted in new
chr14_KZ208920v1_fix	540620	541452	chr14_KZ208920v1_fix:540620-541452	0	-	540999	541452	8553170	3	513,68,56,	0,620,776,
#Deleted in new
chr14_KZ208920v1_fix	540620	543641	chr14_KZ208920v1_fix:540620-543641	1	-	541392	543310	0	6	1233,97,108,102,105,523,	0,1377,1561,2032,2247,2498,
#Deleted in new
chr14_KZ208920v1_fix	540620	543652	chr14_KZ208920v1_fix:540620-543652	1	-	540774	543310	0	9	289,92,68,457,97,108,102,105,534,	0,421,620,776,1377,1561,2032,2247,2498,
#Deleted in new
chr14_KZ208920v1_fix	540624	543583	chr14_KZ208920v1_fix:540624-543583	1	-	540774	543310	789624	8	285,92,68,457,97,108,102,465,	0,417,616,772,1373,1557,2028,2494,
#Deleted in new
chr14_KZ208920v1_fix	540624	543652	chr14_KZ208920v1_fix:540624-543652	3	-	541829	543310	8553170	7	285,92,68,457,102,105,534,	0,417,616,772,2028,2243,2494,
#Deleted in new
chr14_KZ208920v1_fix	540659	543591	chr14_KZ208920v1_fix:540659-543591	1	-	541829	543310	8553170	4	1194,102,105,473,	0,1993,2208,2459,
#Deleted in new
chr14_KZ208920v1_fix	540772	541576	chr14_KZ208920v1_fix:540772-541576	0	-	540772	540772	8553170	3	137,92,336,	0,269,468,
#Deleted in new
chr14_KZ208920v1_fix	541460	543610	chr14_KZ208920v1_fix:541460-543610	1	-	541829	543310	8553170	2	393,492,	0,1658,
#Deleted in new
chr14_KZ208920v1_fix	541478	543385	chr14_KZ208920v1_fix:541478-543385	0	-	541478	543310	8553170	5	375,97,102,105,267,	0,519,1174,1389,1640,
#Deleted in new
chr14_KZ208920v1_fix	541556	542414	chr14_KZ208920v1_fix:541556-542414	0	-	541556	541556	8553170	3	297,97,233,	0,441,625,
#Deleted in new
chr14_KZ208920v1_fix	541580	543563	chr14_KZ208920v1_fix:541580-543563	0	-	541580	542250	8553170	6	273,97,108,102,105,209,	0,417,601,1072,1287,1774,
#Deleted in new
chr14_KZ208920v1_fix	542091	543320	chr14_KZ208920v1_fix:542091-543320	0	-	542091	542091	8553170	4	198,102,105,202,	0,561,776,1027,
#Deleted in new
chr14_KZ208920v1_fix	542368	543055	chr14_KZ208920v1_fix:542368-543055	0	-	542368	542368	8553170	2	386,188,	0,499,
#Deleted in new
chr14_KZ208920v1_fix	542707	543613	chr14_KZ208920v1_fix:542707-543613	0	-	542707	542707	8553170	3	47,32,495,	0,160,411,
#Deleted in new
chr14_KZ208920v1_fix	550091	564188	chr14_KZ208920v1_fix:550091-564188	3	-	550290	563330	0	15	428,137,161,282,154,89,104,139,175,108,119,249,189,321,122,	0,5038,5550,5858,6250,6875,9171,9421,9961,10590,10826,11336,12581,12920,13975,
#Deleted in new
chr14_KZ208920v1_fix	550185	564158	chr14_KZ208920v1_fix:550185-564158	1	-	550290	559338	0	9	334,137,161,282,154,89,104,228,92,	0,4944,5456,5764,6156,6781,9077,12919,13881,
#Deleted in new
chr14_KZ208920v1_fix	555100	556034	chr14_KZ208920v1_fix:555100-556034	0	-	555125	556034	8553170	3	166,161,85,	0,541,849,
#Deleted in new
chr14_KZ208920v1_fix	556431	561136	chr14_KZ208920v1_fix:556431-561136	0	-	556431	560738	8553170	7	64,89,104,139,175,108,219,	0,535,2831,3081,3621,4250,4486,
#Deleted in new
chr14_KZ208920v1_fix	562775	564516	chr14_KZ208920v1_fix:562775-564516	0	-	562775	563330	8553170	4	86,321,115,33,	0,236,1291,1708,
#Deleted in new
chr14_KZ208920v1_fix	563136	565242	chr14_KZ208920v1_fix:563136-565242	0	-	563136	563330	8553170	2	196,331,	0,1775,
#Deleted in new
chr14_KZ208920v1_fix	563179	565216	chr14_KZ208920v1_fix:563179-565216	0	-	563179	563330	8553170	3	153,104,305,	0,887,1732,
#Deleted in new
chr14_KZ208920v1_fix	563204	564518	chr14_KZ208920v1_fix:563204-564518	0	-	563204	563330	8553170	2	128,452,	0,862,
#Deleted in new
chr14_KZ208920v1_fix	563302	565410	chr14_KZ208920v1_fix:563302-565410	0	-	563302	563330	8553170	2	30,439,	0,1669,
#Deleted in new
chr14_KZ208920v1_fix	566515	572577	chr14_KZ208920v1_fix:566515-572577	1	-	566592	572093	789624	16	226,88,114,117,89,89,52,106,102,83,84,204,188,125,111,487,	0,892,1238,2122,2332,2572,2831,2976,3187,3373,3542,3953,4415,4796,5299,5575,
#Deleted in new
chr14_KZ208920v1_fix	566515	568686	chr14_KZ208920v1_fix:566515-568686	0	-	566515	566515	8553170	3	226,460,49,	0,892,2122,
#Deleted in new
chr14_KZ208920v1_fix	566515	569141	chr14_KZ208920v1_fix:566515-569141	0	-	566668	569141	8553170	6	218,88,114,117,89,54,	0,892,1238,2122,2332,2572,
#Deleted in new
chr14_KZ208920v1_fix	566515	572717	chr14_KZ208920v1_fix:566515-572717	3	-	566592	572093	789624	17	226,88,114,117,89,89,52,106,102,83,84,204,188,125,111,57,253,	0,892,1238,2122,2332,2572,2831,2976,3187,3373,3542,3953,4415,4796,5299,5575,5949,
#Deleted in new
chr14_KZ208920v1_fix	566519	569142	chr14_KZ208920v1_fix:566519-569142	0	-	567478	569142	8553170	7	222,88,19,114,117,89,55,	0,888,1123,1234,2118,2328,2568,
#Deleted in new
chr14_KZ208920v1_fix	566529	572534	chr14_KZ208920v1_fix:566529-572534	0	-	566529	566529	8553170	16	212,88,114,117,93,89,52,106,102,83,84,204,188,125,333,70,	0,878,1224,2108,2314,2558,2817,2962,3173,3359,3528,3939,4401,4782,5285,5935,
#Deleted in new
chr14_KZ208920v1_fix	566533	572527	chr14_KZ208920v1_fix:566533-572527	0	-	568719	572093	8553170	17	208,88,114,117,93,89,52,106,102,83,84,204,188,125,111,136,63,	0,874,1220,2104,2310,2554,2813,2958,3169,3355,3524,3935,4397,4778,5281,5557,5931,
#Deleted in new
chr14_KZ208920v1_fix	566534	572527	chr14_KZ208920v1_fix:566534-572527	0	-	568719	572093	8553170	17	207,88,114,117,93,89,52,106,102,83,84,204,188,125,111,57,63,	0,873,1219,2103,2309,2553,2812,2957,3168,3354,3523,3934,4396,4777,5280,5556,5930,
#Deleted in new
chr14_KZ208920v1_fix	566545	570979	chr14_KZ208920v1_fix:566545-570979	1	-	566592	568910	8553170	10	196,88,114,117,89,89,167,84,204,49,	0,862,1208,2092,2302,2542,3259,3512,3923,4385,
#Deleted in new
chr14_KZ208920v1_fix	566547	572488	chr14_KZ208920v1_fix:566547-572488	0	-	566547	566547	8553170	16	194,88,114,117,89,311,106,102,83,84,204,188,125,111,57,24,	0,860,1206,2090,2300,2540,2944,3155,3341,3510,3921,4383,4764,5267,5543,5917,
#Deleted in new
chr14_KZ208920v1_fix	567582	569364	chr14_KZ208920v1_fix:567582-569364	0	-	567582	567582	8553170	4	285,117,89,277,	0,1055,1265,1505,
#Deleted in new
chr14_KZ208920v1_fix	567763	569160	chr14_KZ208920v1_fix:567763-569160	0	-	567763	567763	8553170	3	104,117,313,	0,874,1084,
#Deleted in new
chr14_KZ208920v1_fix	567794	570127	chr14_KZ208920v1_fix:567794-570127	0	-	567794	567794	8553170	8	73,117,89,89,52,313,83,70,	0,843,1053,1293,1552,1697,2094,2263,
#Deleted in new
chr14_KZ208920v1_fix	568881	572161	chr14_KZ208920v1_fix:568881-572161	0	-	568881	568881	8553170	10	55,311,106,102,83,84,204,188,125,71,	0,206,610,821,1007,1176,1587,2049,2430,3209,
#Deleted in new
chr14_KZ208920v1_fix	570265	572561	chr14_KZ208920v1_fix:570265-572561	0	-	570265	570265	8553170	7	114,61,188,125,111,57,97,	0,203,665,1046,1549,1825,2199,
#Deleted in new
chr14_KZ208920v1_fix	570323	571422	chr14_KZ208920v1_fix:570323-571422	0	-	570323	570323	8553170	3	349,188,111,	0,607,988,
#Deleted in new
chr14_KZ208920v1_fix	570351	572589	chr14_KZ208920v1_fix:570351-572589	0	-	570351	570351	8553170	7	28,204,188,125,162,57,125,	0,117,579,960,1463,1739,2113,
#Deleted in new
chr14_KZ208920v1_fix	570606	572516	chr14_KZ208920v1_fix:570606-572516	0	-	571109	572093	8553170	6	66,188,99,111,57,52,	0,324,731,1208,1484,1858,
#Deleted in new
chr14_KZ208920v1_fix	570637	572575	chr14_KZ208920v1_fix:570637-572575	0	-	570637	570637	8553170	5	35,188,125,111,111,	0,293,674,1177,1827,
#Deleted in new
chr14_KZ208920v1_fix	570932	572494	chr14_KZ208920v1_fix:570932-572494	0	-	570932	570932	8553170	4	186,125,162,404,	0,379,882,1158,
#Deleted in new
chr14_KZ208920v1_fix	571326	572382	chr14_KZ208920v1_fix:571326-572382	0	-	571326	571326	8553170	2	110,568,	0,488,
#Deleted in new
chr14_KZ208920v1_fix	591575	592103	chr14_KZ208920v1_fix:591575-592103	0	-	591575	591575	8553170	1	528,	0,
#Deleted in new
chr14_KZ208920v1_fix	591575	600811	chr14_KZ208920v1_fix:591575-600811	3	-	591836	600084	0	9	398,81,70,147,133,80,144,174,253,	0,541,958,1586,2054,5911,6140,8359,8983,
#Deleted in new
chr14_KZ208920v1_fix	591575	593621	chr14_KZ208920v1_fix:591575-593621	0	-	591575	591575	8553170	5	398,81,70,147,23,	0,541,958,1586,2023,
#Deleted in new
chr14_KZ208920v1_fix	591575	592899	chr14_KZ208920v1_fix:591575-592899	0	-	591575	591575	8553170	2	398,783,	0,541,
#Deleted in new
chr14_KZ208920v1_fix	591577	595634	chr14_KZ208920v1_fix:591577-595634	0	-	591577	591577	8553170	4	396,81,147,2036,	0,539,1584,2021,
#Deleted in new
chr14_KZ208920v1_fix	591577	600438	chr14_KZ208920v1_fix:591577-600438	1	-	591836	600084	0	9	396,81,70,147,133,80,144,174,245,	0,539,956,1584,2052,5909,6138,8357,8616,
#Deleted in new
chr14_KZ208920v1_fix	591580	600721	chr14_KZ208920v1_fix:591580-600721	0	-	593609	600084	8553170	8	393,81,70,518,80,144,174,163,	0,536,953,1581,5906,6135,8354,8978,
#Deleted in new
chr14_KZ208920v1_fix	591613	600739	chr14_KZ208920v1_fix:591613-600739	0	-	591613	591613	8553170	7	360,487,601,80,144,174,181,	0,503,1548,5873,6102,8321,8945,
#Deleted in new
chr14_KZ208920v1_fix	593189	600670	chr14_KZ208920v1_fix:593189-600670	0	-	593189	593189	8553170	5	119,80,144,174,112,	0,4297,4526,6745,7369,
#Deleted in new
chr14_KZ208920v1_fix	597639	600729	chr14_KZ208920v1_fix:597639-600729	0	-	597639	597639	8553170	3	220,174,171,	0,2295,2919,
#Deleted in new
chr14_KZ208920v1_fix	599688	600747	chr14_KZ208920v1_fix:599688-600747	0	-	599688	599688	8553170	2	420,189,	0,870,
#Deleted in new
chr14_KZ208920v1_fix	600839	610102	chr14_KZ208920v1_fix:600839-610102	3	+	600932	606073	789624	10	340,450,111,142,193,141,126,237,106,4187,	0,546,1750,2103,2370,3212,3870,4179,4631,5076,
#Deleted in new
chr14_KZ208920v1_fix	600856	606194	chr14_KZ208920v1_fix:600856-606194	1	+	600932	605936	789624	10	323,450,111,142,193,141,126,148,29,279,	0,529,1733,2086,2353,3195,3853,4162,4691,5059,
#Deleted in new
chr14_KZ208920v1_fix	601654	610088	chr14_KZ208920v1_fix:601654-610088	0	+	601654	606584	8553170	11	181,111,142,193,141,126,237,106,108,287,507,	0,935,1288,1555,2397,3055,3364,3816,4261,4904,7927,
#Deleted in new
chr14_KZ208920v1_fix	603382	607633	chr14_KZ208920v1_fix:603382-607633	0	+	603382	607471	8553170	4	20,141,126,168,	0,669,1327,4083,
#Deleted in new
chr14_KZ208920v1_fix	606073	609241	chr14_KZ208920v1_fix:606073-609241	1	-	606610	608836	0	5	670,191,150,145,446,	0,851,1278,2275,2722,
#Deleted in new
chr14_KZ208920v1_fix	606164	612400	chr14_KZ208920v1_fix:606164-612400	3	-	606610	608836	0	7	579,191,150,145,103,352,774,	0,760,1187,2184,2631,3292,5462,
#Deleted in new
chr14_KZ208920v1_fix	606164	612373	chr14_KZ208920v1_fix:606164-612373	1	-	606610	608836	0	8	579,191,150,145,103,352,142,747,	0,760,1187,2184,2631,3292,5220,5462,
#Deleted in new
chr14_KZ208920v1_fix	606583	607439	chr14_KZ208920v1_fix:606583-607439	0	-	606647	607439	8553170	2	160,88,	0,768,
#Deleted in new
chr14_KZ208920v1_fix	606711	612123	chr14_KZ208920v1_fix:606711-612123	0	+	611642	612123	8553170	3	134,85,491,	0,4437,4921,
#Deleted in new
chr14_KZ208920v1_fix	609932	613024	chr14_KZ208920v1_fix:609932-613024	1	+	611549	612719	789624	1	3092,	0,
#Deleted in new
chr14_KZ208920v1_fix	611064	611696	chr14_KZ208920v1_fix:611064-611696	0	-	611064	611064	8553170	2	462,70,	0,562,
#Deleted in new
chr14_KZ208920v1_fix	611117	613031	chr14_KZ208920v1_fix:611117-613031	3	+	611642	612719	789624	2	116,1399,	0,515,
#Deleted in new
chr14_KZ208920v1_fix	611128	613031	chr14_KZ208920v1_fix:611128-613031	1	+	611642	612719	789624	2	105,1455,	0,448,
#Deleted in new
chr14_KZ208920v1_fix	611148	612599	chr14_KZ208920v1_fix:611148-612599	0	+	611642	612599	8553170	2	85,1023,	0,428,
#Deleted in new
chr14_KZ208920v1_fix	611776	612408	chr14_KZ208920v1_fix:611776-612408	0	-	611776	611776	8553170	2	349,203,	0,429,
#Deleted in new
chr14_KZ208920v1_fix	612427	616936	chr14_KZ208920v1_fix:612427-616936	0	+	616629	616936	8553170	2	109,322,	0,4187,
#Deleted in new
chr14_KZ208920v1_fix	612476	617924	chr14_KZ208920v1_fix:612476-617924	3	+	616629	617688	789624	2	306,1310,	0,4138,
#Deleted in new
chr14_KZ208920v1_fix	614288	619014	chr14_KZ208920v1_fix:614288-619014	1	+	616629	617688	789624	2	1710,2400,	0,2326,
#Deleted in new
chr14_KZ208920v1_fix	614891	617625	chr14_KZ208920v1_fix:614891-617625	0	+	616929	617625	8553170	2	42,755,	0,1979,
#Deleted in new
chr14_KZ208920v1_fix	615677	617924	chr14_KZ208920v1_fix:615677-617924	1	+	616629	617688	789624	2	317,1310,	0,937,
#Deleted in new
chr14_KZ208920v1_fix	619326	636049	chr14_KZ208920v1_fix:619326-636049	0	-	630879	633622	8553170	21	220,125,115,108,147,1389,138,85,98,70,87,44,174,133,159,112,149,150,201,198,88,	0,305,749,980,1393,3717,5713,5958,7028,7469,7730,7950,10712,11052,11511,12669,12859,13439,14173,14442,16635,
#Deleted in new
chr14_KZ208920v1_fix	619326	636049	chr14_KZ208920v1_fix:619326-636049	1	-	619393	635630	789624	26	220,125,115,108,147,159,85,185,111,138,85,98,70,87,44,174,133,159,128,112,149,150,162,198,185,88,	0,305,749,980,1393,3717,4275,4555,4995,5713,5958,7028,7469,7730,7950,10712,11052,11511,11819,12669,12859,13439,14173,14442,16145,16635,
#Deleted in new
chr14_KZ208920v1_fix	619341	620187	chr14_KZ208920v1_fix:619341-620187	0	-	619341	619341	8553170	1	846,	0,
#Deleted in new
chr14_KZ208920v1_fix	619341	633462	chr14_KZ208920v1_fix:619341-633462	0	-	619341	619341	8553170	19	205,125,115,108,147,261,643,185,111,138,85,98,70,87,44,174,133,1270,1277,	0,290,734,965,1378,3352,3702,4540,4980,5698,5943,7013,7454,7715,7935,10697,11037,11496,12844,
#Deleted in new
chr14_KZ208920v1_fix	619341	636049	chr14_KZ208920v1_fix:619341-636049	1	-	619393	635630	789624	26	205,125,115,108,147,159,85,185,111,138,85,98,70,87,44,174,133,159,128,112,149,150,162,198,189,88,	0,290,734,965,1378,3702,4260,4540,4980,5698,5943,7013,7454,7715,7935,10697,11037,11496,11804,12654,12844,13424,14158,14427,16130,16620,
#Deleted in new
chr14_KZ208920v1_fix	619342	631586	chr14_KZ208920v1_fix:619342-631586	0	-	619342	619342	8553170	16	204,125,115,108,163,159,85,185,111,98,70,264,267,174,133,749,	0,289,733,964,1377,3701,4259,4539,4979,7012,7453,7714,10242,10696,11036,11495,
#Deleted in new
chr14_KZ208920v1_fix	619369	635725	chr14_KZ208920v1_fix:619369-635725	1	-	619393	635630	789624	25	177,125,115,108,147,159,85,185,111,138,85,98,70,87,44,174,133,159,128,112,149,150,162,198,254,	0,262,706,937,1350,3674,4232,4512,4952,5670,5915,6985,7426,7687,7907,10669,11009,11468,11776,12626,12816,13396,14130,14399,16102,
#Deleted in new
chr14_KZ208920v1_fix	619369	635725	chr14_KZ208920v1_fix:619369-635725	0	-	630410	635630	8553170	25	177,125,115,108,147,159,85,185,111,138,85,98,70,87,44,174,133,159,160,112,149,150,162,198,254,	0,262,706,937,1350,3674,4232,4512,4952,5670,5915,6985,7426,7687,7907,10669,11009,11468,11776,12626,12816,13396,14130,14399,16102,
#Deleted in new
chr14_KZ208920v1_fix	619902	620757	chr14_KZ208920v1_fix:619902-620757	0	-	619902	619902	8553170	3	288,108,38,	0,404,817,
#Deleted in new
chr14_KZ208920v1_fix	620283	623341	chr14_KZ208920v1_fix:620283-623341	0	-	620283	620283	8553170	3	228,147,298,	0,436,2760,
#Deleted in new
chr14_KZ208920v1_fix	623373	624541	chr14_KZ208920v1_fix:623373-624541	0	-	623373	623373	8553170	2	693,220,	0,948,
#Deleted in new
chr14_KZ208920v1_fix	626384	627493	chr14_KZ208920v1_fix:626384-627493	0	-	626384	626384	8553170	3	68,70,437,	0,411,672,
#Deleted in new
chr14_KZ208920v1_fix	626801	630446	chr14_KZ208920v1_fix:626801-630446	0	-	626801	630446	8553170	5	64,61,44,174,68,	0,281,475,3237,3577,
#Deleted in new
chr14_KZ208920v1_fix	631559	633549	chr14_KZ208920v1_fix:631559-633549	0	-	631559	631559	8553170	4	548,149,150,50,	0,626,1206,1940,
#Deleted in new
chr14_KZ208920v1_fix	633215	636071	chr14_KZ208920v1_fix:633215-636071	0	-	633215	633215	8553170	2	751,600,	0,2256,
#Deleted in new
chr14_KZ208920v1_fix	633287	638360	chr14_KZ208920v1_fix:633287-638360	3	-	633446	638360	8553170	4	374,198,61,297,	0,481,4575,4776,
#Deleted in new
chr14_KZ208920v1_fix	633514	636049	chr14_KZ208920v1_fix:633514-636049	0	-	633514	633622	8553170	4	147,198,142,88,	0,254,1957,2447,
#Deleted in new
chr14_KZ208920v1_fix	633636	636049	chr14_KZ208920v1_fix:633636-636049	0	-	633636	633636	8553170	4	25,198,142,187,	0,132,1835,2226,
#Deleted in new
chr14_KZ208920v1_fix	633685	636049	chr14_KZ208920v1_fix:633685-636049	2	-	633685	633685	8553170	4	15,198,142,88,	0,83,1786,2276,
#Deleted in new
chr14_KZ208920v1_fix	633779	636049	chr14_KZ208920v1_fix:633779-636049	0	-	633779	635630	8553170	3	187,185,187,	0,1692,2083,
#Deleted in new
chr14_KZ208920v1_fix	636998	641023	chr14_KZ208920v1_fix:636998-641023	3	-	637152	640804	789624	10	375,61,375,68,168,47,146,310,141,239,	0,864,1065,1674,1852,2228,2401,2994,3436,3786,
#Deleted in new
chr14_KZ208920v1_fix	637152	640967	chr14_KZ208920v1_fix:637152-640967	0	-	639194	640804	789624	10	221,61,375,68,168,85,146,310,141,183,	0,710,911,1520,1698,2036,2247,2840,3282,3632,
#Deleted in new
chr14_KZ208920v1_fix	637653	638380	chr14_KZ208920v1_fix:637653-638380	0	-	637752	638380	8553170	2	270,317,	0,410,
#Deleted in new
chr14_KZ208920v1_fix	639023	640993	chr14_KZ208920v1_fix:639023-640993	0	-	639023	639023	8553170	3	1279,141,209,	0,1411,1761,
#Deleted in new
chr14_KZ208920v1_fix	640134	641000	chr14_KZ208920v1_fix:640134-641000	0	-	640134	640134	8553170	2	441,216,	0,650,
#Deleted in new
chr14_KZ208920v1_fix	640169	640967	chr14_KZ208920v1_fix:640169-640967	0	-	640169	640169	8553170	3	133,184,183,	0,222,615,
#Deleted in new
chr14_KZ208920v1_fix	640277	640978	chr14_KZ208920v1_fix:640277-640978	0	-	640277	640277	8553170	2	25,544,	0,157,
#Deleted in new
chr14_KZ208920v1_fix	653034	653135	chr14_KZ208920v1_fix:653034-653135	3	-	653034	653034	8553170	1	101,	0,
#Deleted in new
chr14_KZ208920v1_fix	666650	672794	chr14_KZ208920v1_fix:666650-672794	0	+	666650	666650	8553170	5	46,125,129,1096,99,	0,1417,2639,3826,6045,
#Deleted in new
chr14_KZ208920v1_fix	667888	680582	chr14_KZ208920v1_fix:667888-680582	3	+	668032	677921	0	10	304,129,1096,163,200,173,141,56,127,3311,	0,1401,2588,5530,6260,6784,7415,8749,9064,9383,
#Deleted in new
chr14_KZ208920v1_fix	667916	678886	chr14_KZ208920v1_fix:667916-678886	1	+	668032	678683	0	11	276,129,1096,163,200,173,141,56,127,261,271,	0,1373,2560,5502,6232,6756,7387,8721,9036,9355,10699,
#Deleted in new
chr14_KZ208920v1_fix	668237	680582	chr14_KZ208920v1_fix:668237-680582	1	+	668319	677921	0	10	92,129,1096,163,200,173,141,56,127,3311,	0,1052,2239,5181,5911,6435,7066,8400,8715,9034,
#Deleted in new
chr14_KZ208920v1_fix	668237	678683	chr14_KZ208920v1_fix:668237-678683	1	+	668319	678683	0	11	92,129,1096,163,200,173,141,56,127,585,68,	0,1052,2239,5181,5911,6435,7066,8400,8715,9034,10378,
#Deleted in new
chr14_KZ208920v1_fix	668237	675123	chr14_KZ208920v1_fix:668237-675123	0	+	668237	668237	8553170	6	92,129,1096,163,200,451,	0,1052,2239,5181,5911,6435,
#Deleted in new
chr14_KZ208920v1_fix	668237	678683	chr14_KZ208920v1_fix:668237-678683	1	+	668319	678683	0	11	92,129,1096,163,200,173,141,56,127,261,68,	0,1052,2239,5181,5911,6435,7066,8400,8715,9034,10378,
#Deleted in new
chr14_KZ208920v1_fix	668341	680582	chr14_KZ208920v1_fix:668341-680582	1	+	668564	677921	0	10	290,129,1096,163,200,173,141,56,127,3311,	0,948,2135,5077,5807,6331,6962,8296,8611,8930,
#Deleted in new
chr14_KZ208920v1_fix	668445	678683	chr14_KZ208920v1_fix:668445-678683	1	+	668564	678683	0	11	186,129,1096,163,200,173,141,56,127,585,68,	0,844,2031,4973,5703,6227,6858,8192,8507,8826,10170,
#Deleted in new
chr14_KZ208920v1_fix	668479	678683	chr14_KZ208920v1_fix:668479-678683	1	+	668564	678683	0	11	152,129,1096,163,200,173,141,56,127,261,68,	0,810,1997,4939,5669,6193,6824,8158,8473,8792,10136,
#Deleted in new
chr14_KZ208920v1_fix	668997	679034	chr14_KZ208920v1_fix:668997-679034	1	+	669318	678683	0	10	421,1096,163,200,173,141,56,127,261,419,	0,1479,4421,5151,5675,6306,7640,7955,8274,9618,
#Deleted in new
chr14_KZ208920v1_fix	669025	678695	chr14_KZ208920v1_fix:669025-678695	0	+	669025	669025	8553170	10	393,1096,526,200,173,141,56,127,585,80,	0,1451,4030,5123,5647,6278,7612,7927,8246,9590,
#Deleted in new
chr14_KZ208920v1_fix	669047	670806	chr14_KZ208920v1_fix:669047-670806	0	+	669318	670806	8553170	3	100,129,330,	0,242,1429,
#Deleted in new
chr14_KZ208920v1_fix	669163	673564	chr14_KZ208920v1_fix:669163-673564	0	+	669318	673564	8553170	3	255,172,146,	0,1313,4255,
#Deleted in new
chr14_KZ208920v1_fix	669163	675685	chr14_KZ208920v1_fix:669163-675685	0	+	669163	669163	8553170	5	255,172,163,200,1013,	0,1313,4255,4985,5509,
#Deleted in new
chr14_KZ208920v1_fix	669177	680582	chr14_KZ208920v1_fix:669177-680582	1	+	669318	678683	0	10	241,1096,163,200,173,141,56,127,585,1967,	0,1299,4241,4971,5495,6126,7460,7775,8094,9438,
#Deleted in new
chr14_KZ208920v1_fix	669318	680582	chr14_KZ208920v1_fix:669318-680582	1	+	669318	677921	0	9	100,1096,163,200,173,141,56,127,3311,	0,1158,4100,4830,5354,5985,7319,7634,7953,
#Deleted in new
chr14_KZ208920v1_fix	669976	671035	chr14_KZ208920v1_fix:669976-671035	0	+	670290	671035	8553170	2	345,559,	0,500,
#Deleted in new
chr14_KZ208920v1_fix	670059	678706	chr14_KZ208920v1_fix:670059-678706	1	+	670586	678683	0	10	75,1096,163,200,173,141,56,127,585,91,	0,417,3359,4089,4613,5244,6578,6893,7212,8556,
#Deleted in new
chr14_KZ208920v1_fix	670130	678683	chr14_KZ208920v1_fix:670130-678683	1	+	670586	678683	0	9	1442,163,200,173,141,56,127,261,68,	0,3288,4018,4542,5173,6507,6822,7141,8485,
#Deleted in new
chr14_KZ208920v1_fix	670130	680582	chr14_KZ208920v1_fix:670130-680582	1	+	670586	677921	0	8	1442,163,200,173,141,56,127,3311,	0,3288,4018,4542,5173,6507,6822,7141,
#Deleted in new
chr14_KZ208920v1_fix	670130	678683	chr14_KZ208920v1_fix:670130-678683	1	+	670586	678683	0	9	1442,163,200,173,141,56,127,585,68,	0,3288,4018,4542,5173,6507,6822,7141,8485,
#Deleted in new
chr14_KZ208920v1_fix	670130	680582	chr14_KZ208920v1_fix:670130-680582	1	+	670290	677921	0	9	224,1096,163,200,173,141,56,127,3311,	0,346,3288,4018,4542,5173,6507,6822,7141,
#Deleted in new
chr14_KZ208920v1_fix	670130	678683	chr14_KZ208920v1_fix:670130-678683	1	+	670290	678683	0	10	224,1096,163,200,173,141,56,127,261,68,	0,346,3288,4018,4542,5173,6507,6822,7141,8485,
#Deleted in new
chr14_KZ208920v1_fix	670144	679033	chr14_KZ208920v1_fix:670144-679033	1	+	670290	678683	0	10	210,1096,163,200,173,141,56,127,585,418,	0,332,3274,4004,4528,5159,6493,6808,7127,8471,
#Deleted in new
chr14_KZ208920v1_fix	670222	676986	chr14_KZ208920v1_fix:670222-676986	0	+	670222	670222	8553170	7	99,1096,163,200,772,56,34,	0,254,3196,3926,4450,6415,6730,
#Deleted in new
chr14_KZ208920v1_fix	673792	679002	chr14_KZ208920v1_fix:673792-679002	1	+	674184	678683	0	7	556,173,141,56,127,585,387,	0,880,1511,2845,3160,3479,4823,
#Deleted in new
chr14_KZ208920v1_fix	673792	678683	chr14_KZ208920v1_fix:673792-678683	1	+	674184	678683	0	7	556,173,141,56,127,261,68,	0,880,1511,2845,3160,3479,4823,
#Deleted in new
chr14_KZ208920v1_fix	673792	680582	chr14_KZ208920v1_fix:673792-680582	1	+	674184	677921	0	6	556,173,141,56,127,3311,	0,880,1511,2845,3160,3479,
#Deleted in new
chr14_KZ208920v1_fix	675100	678979	chr14_KZ208920v1_fix:675100-678979	1	+	677351	677921	0	4	344,56,127,1708,	0,1537,1852,2171,
#Deleted in new
chr14_KZ208920v1_fix	675100	678683	chr14_KZ208920v1_fix:675100-678683	1	+	677351	678683	0	5	344,56,127,261,68,	0,1537,1852,2171,3515,
#Deleted in new
chr14_KZ208920v1_fix	675100	678979	chr14_KZ208920v1_fix:675100-678979	1	+	677351	678683	0	5	344,56,127,585,364,	0,1537,1852,2171,3515,
#Deleted in new
chr14_KZ208920v1_fix	677051	679034	chr14_KZ208920v1_fix:677051-679034	0	+	677051	677051	8553170	2	28,419,	0,1564,
#Partially deleted in new
chr15	19878554	19887814	chr15:19878554-19887814	7	+	19878554	19878554	16724991	6	114,174,107,163,65,91,	0,276,2646,3722,6424,9169,
#Deleted in new
chr15	19883613	19883716	chr15:19883613-19883716	3	+	19883613	19883613	8553170	1	103,	0,
#Deleted in new
chr15	19899333	19899559	chr15:19899333-19899559	7	+	19899333	19899333	16724991	1	226,	0,
#Deleted in new
chr15	19955299	19955602	chr15:19955299-19955602	7	-	19955299	19955299	16724991	1	303,	0,
#Deleted in new
chr15	19964665	19965101	chr15:19964665-19965101	3	-	19964665	19965101	789624	2	307,46,	0,390,
#Deleted in new
chr15	19967413	19968352	chr15:19967413-19968352	7	-	19967413	19967413	16724991	1	939,	0,
#Deleted in new
chr15	19972781	19973218	chr15:19972781-19973218	7	-	19972781	19972781	16724991	2	307,46,	0,391,
#Deleted in new
chr15	19987655	19988117	chr15:19987655-19988117	3	-	19987655	19988117	789624	2	313,46,	0,416,
#Deleted in new
chr15	20003839	20003862	chr15:20003839-20003862	3	-	20003839	20003862	789624	1	23,	0,
#Deleted in new
chr15	20004796	20004815	chr15:20004796-20004815	3	-	20004796	20004815	8553170	1	19,	0,
#Deleted in new
chr15	20005904	20005935	chr15:20005904-20005935	3	-	20005904	20005935	789624	1	31,	0,
#Deleted in new
chr15	20008401	20008432	chr15:20008401-20008432	3	-	20008401	20008432	789624	1	31,	0,
#Deleted in new
chr15	20011152	20011169	chr15:20011152-20011169	3	-	20011152	20011169	8553170	1	17,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	20012740	20014208	chr15:20012740-20014208	7	+	20012740	20012740	16724991	3	156,142,99,	0,1027,1369,
#Deleted in new
chr15	20046295	20047994	chr15:20046295-20047994	7	-	20046295	20046295	16724991	1	1699,	0,
#Deleted in new
chr15	20073698	20074334	chr15:20073698-20074334	7	-	20073698	20073698	16724991	1	636,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	20095732	20096029	chr15:20095732-20096029	3	-	20095732	20095732	8553170	1	297,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	20128744	20147953	chr15:20128744-20147953	3	-	20128744	20128744	8553170	4	59,90,171,252,	0,16124,17077,18957,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	20141793	20146430	chr15:20141793-20146430	3	+	20141793	20141793	8553170	1	4637,	0,
#Partially deleted in new
chr15	20153775	20160826	chr15:20153775-20160826	7	+	20153775	20153775	16724991	9	75,52,154,189,181,59,105,150,176,	0,246,738,3641,3914,4341,5368,6384,6875,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr15	20228619	20277503	chr15:20228619-20277503	7	-	20228619	20228619	16724991	13	258,156,147,77,190,125,157,188,167,125,78,76,768,	0,10782,12076,14238,16284,20040,22757,23323,28665,33252,34213,43049,48116,
#Partially deleted in new
chr15	20282743	20291558	chr15:20282743-20291558	7	+	20282743	20282743	16724991	6	231,164,88,85,81,215,	0,752,1411,2507,7369,8600,
#Partially deleted in new
chr15	20283481	20291586	chr15:20283481-20291586	5	+	20283481	20283481	16724991	5	178,83,85,81,243,	0,678,1769,6631,7862,
#Partially deleted in new
chr15	20283495	20291558	chr15:20283495-20291558	5	+	20283495	20283495	16724991	6	164,88,85,81,39,215,	0,659,1755,6617,7484,7848,
#Partially deleted in new
chr15	20344735	20359159	chr15:20344735-20359159	3	+	20344735	20344735	8553170	2	244,286,	0,14138,
#Partially deleted in new
chr15	20349317	20359166	chr15:20349317-20359166	0	+	20349317	20349317	8553170	2	134,293,	0,9556,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	20352360	20356540	chr15:20352360-20356540	1	+	20352360	20352360	8553170	2	760,146,	0,4034,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr15	20379494	20453880	chr15:20379494-20453880	5	-	20379494	20379494	16724991	16	3598,166,143,144,139,231,197,148,169,151,193,188,192,152,143,41,	0,3796,51598,56354,57799,59097,59432,60013,60979,63876,64732,66364,72873,73856,74125,74345,
#Partially deleted in new
chr15	20383114	20506161	chr15:20383114-20506161	4	-	20383114	20383114	16724991	27	342,143,144,139,231,197,148,169,151,193,188,192,152,143,171,134,196,128,133,215,151,104,171,176,115,103,54,	0,47978,52734,54179,55477,55812,56393,57359,60256,61112,62744,69253,70236,70505,70725,71425,74190,74478,74712,75118,78077,79228,79716,83080,100288,122276,122993,
#Partially deleted in new
chr15	20383303	20505485	chr15:20383303-20505485	4	-	20383303	20383303	16724991	26	153,143,144,139,231,197,148,169,183,193,188,221,152,57,171,134,196,128,133,215,151,104,171,176,169,95,	0,47789,52545,53990,55288,55623,56204,57170,60035,60923,62555,69064,70047,70402,70536,71236,74001,74289,74523,74929,77888,79039,79527,82891,118242,122087,
#Partially deleted in new
chr15	20408395	20506180	chr15:20408395-20506180	7	-	20408395	20408395	16724991	26	334,143,144,139,231,197,148,169,151,193,188,192,152,143,171,134,196,128,133,215,151,104,171,176,103,73,	0,22697,27453,28898,30196,30531,31112,32078,34975,35831,37463,43972,44955,45224,45444,46144,48909,49197,49431,49837,52796,53947,54435,57799,96995,97712,
#Partially deleted in new
chr15	20431092	20505462	chr15:20431092-20505462	5	-	20431092	20431092	16724991	26	143,144,139,231,197,148,169,151,193,188,192,152,143,171,134,196,128,133,215,151,104,171,176,132,115,72,	0,4756,6201,7499,7834,8415,9381,12278,13134,14766,21275,22258,22527,22747,23447,26212,26500,26734,27140,30099,31250,31738,35102,45832,52310,74298,
#Partially deleted in new
chr15	20438696	20453675	chr15:20438696-20453675	4	-	20438696	20438696	16724991	9	126,729,169,151,193,188,192,152,56,	0,230,1777,4674,5530,7162,13671,14654,14923,
#Partially deleted in new
chr15	20439269	20440670	chr15:20439269-20440670	4	-	20439269	20439269	16724991	2	386,197,	0,1204,
#Partially deleted in new
chr15	20444252	20453665	chr15:20444252-20453665	4	-	20444252	20444252	16724991	5	167,188,221,152,53,	0,1606,8115,9098,9360,
#Partially deleted in new
chr15	20444302	20453401	chr15:20444302-20453401	4	-	20444302	20444302	16724991	4	117,162,221,51,	0,1582,8065,9048,
#Partially deleted in new
chr15	20457825	20462539	chr15:20457825-20462539	4	-	20457825	20457825	16724991	3	134,215,197,	0,407,4517,
#Partially deleted in new
chr15	20458231	20462550	chr15:20458231-20462550	4	-	20458231	20458231	16724991	3	216,151,208,	0,2960,4111,
#Partially deleted in new
chr15	20462377	20506171	chr15:20462377-20506171	4	-	20462377	20462377	16724991	5	69,171,115,103,64,	0,453,21025,43013,43730,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	20462407	20477393	chr15:20462407-20477393	4	-	20462407	20462407	16724991	4	39,171,176,192,	0,423,3787,14794,
#Partially deleted in new
chr15	20516251	20520627	chr15:20516251-20520627	7	+	20516251	20516251	16724991	4	203,227,125,180,	0,2387,2706,4196,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	20531855	20541800	chr15:20531855-20541800	3	-	20534258	20541709	789624	9	1747,1431,142,59,107,94,51,129,253,	0,2403,4486,4958,6396,6598,6780,7917,9692,
#Partially deleted in new
chr15	20545575	20549444	chr15:20545575-20549444	7	-	20545575	20545575	16724991	4	53,150,379,88,	0,928,1739,3781,
#Partially deleted in new
chr15	20562374	20575696	chr15:20562374-20575696	7	+	20562374	20562374	16724991	18	146,120,60,81,360,85,110,90,108,88,257,69,76,92,101,101,153,3140,	0,1845,2550,2793,3729,4177,4357,5487,5683,5986,6443,6967,8404,8911,9571,9754,9944,10182,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	20570885	20571175	chr15:20570885-20571175	3	+	20570885	20570885	8553170	1	290,	0,
#Deleted in new
chr15	20593493	20599195	chr15:20593493-20599195	7	-	20593493	20593493	16724991	3	3843,923,199,	0,4168,5503,
#Deleted in new
chr15	20626818	20627365	chr15:20626818-20627365	7	-	20626818	20626818	16724991	1	547,	0,
#Deleted in new
chr15	20639463	20639890	chr15:20639463-20639890	7	-	20639463	20639463	16724991	2	282,61,	0,366,
#Deleted in new
chr15	20642798	20643448	chr15:20642798-20643448	3	-	20642798	20642798	8553170	1	650,	0,
#Partially deleted in new
chr15	20657637	20688408	chr15:20657637-20688408	7	-	20657637	20657637	16724991	8	106,98,63,80,170,156,112,194,	0,4322,4505,5297,11830,13475,23472,30577,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	20658899	20661028	chr15:20658899-20661028	0	+	20658899	20658899	8553170	1	2129,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	20660759	20664970	chr15:20660759-20664970	3	+	20660759	20660759	8553170	1	4211,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	20729746	20756183	chr15:20729746-20756183	3	-	20729746	20729746	8553170	2	1348,254,	0,26183,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	20738678	20738785	chr15:20738678-20738785	3	+	20738678	20738678	8553170	1	107,	0,
#Partially deleted in new
chr15	20759310	20774794	chr15:20759310-20774794	3	-	20759310	20759310	8553170	2	597,151,	0,15333,
#Deleted in new
chr15	20773083	20774871	chr15:20773083-20774871	3	+	20773083	20773083	8553170	2	517,557,	0,1231,
#Deleted in new
chr15	20775463	20775998	chr15:20775463-20775998	7	-	20775463	20775463	16724991	1	535,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	20803504	20826173	chr15:20803504-20826173	7	-	20803504	20803504	16724991	3	1428,54,25,	0,14534,22644,
#Deleted in new
chr15	20803713	20804803	chr15:20803713-20804803	5	-	20803713	20803713	16724991	1	1090,	0,
#Deleted in new
chr15	20813298	20814958	chr15:20813298-20814958	7	+	20813298	20813298	16724991	3	469,60,232,	0,998,1428,
#Deleted in new
chr15	20826453	20826640	chr15:20826453-20826640	7	-	20826453	20826453	16724991	1	187,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	20832794	20832869	chr15:20832794-20832869	3	+	20832794	20832794	5263520	1	75,	0,
#Partially deleted in new
chr15	20835371	20866314	chr15:20835371-20866314	0	-	20847060	20866281	789624	9	232,124,167,45,71,107,174,115,443,	0,1872,10461,11673,18685,22739,25670,26003,30500,
#Partially deleted in new
chr15	20835371	20866314	chr15:20835371-20866314	3	-	20835390	20866281	789624	11	232,124,167,45,71,71,138,107,174,115,443,	0,1872,10461,11673,13121,18685,21264,22739,25670,26003,30500,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	20855250	20855357	chr15:20855250-20855357	3	-	20855250	20855250	8553170	1	107,	0,
#Deleted in new
chr15	20890205	20890606	chr15:20890205-20890606	7	-	20890205	20890205	16724991	1	401,	0,
#Deleted in new
chr15	20893382	20893980	chr15:20893382-20893980	7	-	20893382	20893382	16724991	1	598,	0,
#Deleted in new
chr15	20901440	20901609	chr15:20901440-20901609	7	-	20901440	20901440	16724991	1	169,	0,
#Partially deleted in new
chr15	20916685	20935658	chr15:20916685-20935658	7	-	20916685	20916685	16724991	17	112,156,146,100,159,127,166,208,182,121,84,123,140,440,84,73,224,	0,3716,5099,6480,7091,9651,9921,12183,12511,13271,14545,15092,15497,15995,17823,18141,18749,
#Deleted in new
chr15	20940251	20940333	chr15:20940251-20940333	3	+	20940251	20940251	5263520	1	82,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	20940437	20993303	chr15:20940437-20993303	3	+	20940437	20940437	789624	5	329,186,44,158,2684,	0,1937,31668,41385,50182,
#Deleted in new
chr15	20960674	20961581	chr15:20960674-20961581	7	+	20960674	20960674	16724991	1	907,	0,
#Partially deleted in new
chr15	20969281	20970215	chr15:20969281-20970215	7	-	20969281	20969281	16724991	1	934,	0,
#Partially deleted in new
chr15	20979019	20990782	chr15:20979019-20990782	0	+	20979019	20979019	8553170	3	338,158,163,	0,2803,11600,
#Partially deleted in new
chr15	20979046	20991488	chr15:20979046-20991488	0	+	20979046	20979046	8553170	4	72,158,109,198,	0,2776,11573,12244,
#Partially deleted in new
chr15	20979064	20983414	chr15:20979064-20983414	0	+	20979064	20979064	8553170	3	54,158,315,	0,2758,4035,
#Partially deleted in new
chr15	20990658	20993271	chr15:20990658-20993271	0	+	20990658	20990658	8553170	2	70,335,	0,2278,
#Deleted in new
chr15	21010493	21010516	chr15:21010493-21010516	3	-	21010493	21010516	789624	1	23,	0,
#Deleted in new
chr15	21011450	21011469	chr15:21011450-21011469	3	-	21011450	21011469	8553170	1	19,	0,
#Deleted in new
chr15	21012558	21012589	chr15:21012558-21012589	3	-	21012558	21012589	789624	1	31,	0,
#Deleted in new
chr15	21015047	21015078	chr15:21015047-21015078	3	-	21015047	21015078	789624	1	31,	0,
#Deleted in new
chr15	21017799	21017816	chr15:21017799-21017816	3	-	21017799	21017816	8553170	1	17,	0,
#Deleted in new
chr15	21053003	21054702	chr15:21053003-21054702	7	-	21053003	21053003	16724991	1	1699,	0,
#Deleted in new
chr15	21080811	21081447	chr15:21080811-21081447	7	-	21080811	21080811	16724991	1	636,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	21102842	21103138	chr15:21102842-21103138	3	-	21102842	21102842	8553170	1	296,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	21148333	21152970	chr15:21148333-21152970	3	+	21148333	21148333	8553170	1	4637,	0,
#Partially deleted in new
chr15	21160304	21167357	chr15:21160304-21167357	7	+	21160304	21160304	16724991	8	75,172,189,181,59,147,148,176,	0,720,3643,3916,4343,5370,6388,6877,
#Deleted in new
chr15	21250179	21260147	chr15:21250179-21260147	7	-	21250179	21250179	16724991	3	117,142,123,	0,7133,9845,
#Deleted in new
chr15	21293652	21295201	chr15:21293652-21295201	7	-	21293652	21293652	16724991	1	1549,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	21298232	21325241	chr15:21298232-21325241	3	-	21298232	21298232	8553170	2	1911,254,	0,26755,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	21307748	21307855	chr15:21307748-21307855	3	+	21307748	21307748	8553170	1	107,	0,
#Partially deleted in new
chr15	21328379	21343881	chr15:21328379-21343881	3	-	21328379	21328379	8553170	2	601,151,	0,15351,
#Deleted in new
chr15	21342170	21343958	chr15:21342170-21343958	3	+	21342170	21342170	8553170	2	517,557,	0,1231,
#Deleted in new
chr15	21344547	21345085	chr15:21344547-21345085	7	-	21344547	21344547	16724991	1	538,	0,
#Deleted in new
chr15	21368458	21370621	chr15:21368458-21370621	3	+	21368458	21368458	8553170	1	2163,	0,
#Deleted in new
chr15	21372792	21373881	chr15:21372792-21373881	7	-	21372792	21372792	16724991	1	1089,	0,
#Deleted in new
chr15	21382382	21382842	chr15:21382382-21382842	7	+	21382382	21382382	16724991	1	460,	0,
#Deleted in new
chr15	21383820	21384064	chr15:21383820-21384064	7	+	21383820	21383820	16724991	1	244,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	21406384	21406459	chr15:21406384-21406459	3	+	21406384	21406384	5263520	1	75,	0,
#Partially deleted in new
chr15	21408242	21440451	chr15:21408242-21440451	0	-	21420689	21440011	789624	10	953,124,167,45,71,138,107,174,115,961,	0,2635,11221,12431,19442,22021,23496,26418,26751,31248,
#Partially deleted in new
chr15	21408963	21440059	chr15:21408963-21440059	3	-	21408982	21440011	789624	11	232,124,167,45,71,71,138,107,174,115,569,	0,1914,10500,11710,13156,18721,21300,22775,25697,26030,30527,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	21425018	21440382	chr15:21425018-21440382	0	-	21426228	21440011	789624	8	271,221,71,138,107,174,115,892,	0,1009,2666,5245,6720,9642,9975,14472,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	21428878	21428985	chr15:21428878-21428985	3	-	21428878	21428878	8553170	1	107,	0,
#Partially deleted in new
chr15	21490363	21502997	chr15:21490363-21502997	7	-	21490363	21490363	16724991	8	106,146,111,89,40,166,208,100,	0,3742,5118,6501,7864,9944,12206,12534,
#Partially deleted in new
chr15	21500050	21509404	chr15:21500050-21509404	5	-	21500050	21500050	16724991	12	114,166,208,182,121,84,122,140,440,84,73,274,	0,257,2519,2847,3601,4875,5422,5826,6324,8154,8472,9080,
#Deleted in new
chr15	21513958	21514040	chr15:21513958-21514040	3	+	21513958	21513958	5263520	1	82,	0,
#Deleted in new
chr15	21534403	21535346	chr15:21534403-21535346	7	+	21534403	21534403	16724991	1	943,	0,
#Partially deleted in new
chr15	21542989	21544008	chr15:21542989-21544008	7	-	21542989	21542989	16724991	1	1019,	0,
#Partially deleted in new
chr15	21552794	21640521	chr15:21552794-21640521	0	+	21552794	21552794	789624	11	71,158,109,95,389,96,89,204,53,245,91,	0,2767,11578,42811,56285,63335,63935,64246,85183,85444,87636,
#Partially deleted in new
chr15	21552814	21557161	chr15:21552814-21557161	3	+	21552814	21552814	8553170	3	51,158,323,	0,2747,4024,
#Deleted in new
chr15	21574224	21575207	chr15:21574224-21575207	7	-	21574224	21574224	16724991	1	983,	0,
#Partially deleted in new
chr15	21579911	21653276	chr15:21579911-21653276	3	+	21651934	21652885	789624	7	99,95,389,96,89,204,1351,	0,15694,29168,36218,36818,37129,72014,
#Deleted in new
chr15	21595683	21596526	chr15:21595683-21596526	7	-	21595683	21595683	16724991	1	843,	0,
#Deleted in new
chr15	21609101	21610043	chr15:21609101-21610043	7	+	21609101	21609101	16724991	1	942,	0,
#Deleted in new
chr15	21614117	21615051	chr15:21614117-21615051	7	+	21614117	21614117	16724991	1	934,	0,
#Deleted in new
chr15	21637908	21638992	chr15:21637908-21638992	3	+	21638006	21638948	789624	1	1084,	0,
#Deleted in new
chr15	21651843	21652968	chr15:21651843-21652968	3	+	21651934	21652885	789624	1	1125,	0,
#Deleted in new
chr15	21683037	21683962	chr15:21683037-21683962	7	+	21683037	21683037	16724991	1	925,	0,
#Deleted in new
chr15	21703427	21705627	chr15:21703427-21705627	3	-	21703427	21703427	8553170	2	471,97,	0,2103,
#Deleted in new
chr15	21709648	21710270	chr15:21709648-21710270	7	-	21709648	21709648	16724991	1	622,	0,
#Deleted in new
chr15	21717807	21718245	chr15:21717807-21718245	3	-	21717807	21718245	789624	2	307,46,	0,392,
#Deleted in new
chr15	21735505	21735945	chr15:21735505-21735945	7	-	21735505	21735505	16724991	2	309,46,	0,394,
#Deleted in new
chr15	21742363	21742799	chr15:21742363-21742799	3	-	21742363	21742799	789624	2	307,46,	0,390,
#Partially deleted in new
chr15	21752277	21752710	chr15:21752277-21752710	7	-	21752277	21752277	16724991	2	305,43,	0,390,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	21843749	21843824	chr15:21843749-21843824	3	+	21843749	21843749	5263520	1	75,	0,
#Partially deleted in new
chr15	21846328	21877279	chr15:21846328-21877279	0	-	21858019	21877246	789624	9	232,124,167,45,71,107,174,115,443,	0,1870,10463,11675,18687,22743,25678,26011,30508,
#Partially deleted in new
chr15	21846328	21877298	chr15:21846328-21877298	3	-	21846347	21877246	789624	11	232,124,167,45,71,71,138,107,174,115,462,	0,1870,10463,11675,13123,18687,21268,22743,25678,26011,30508,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	21862349	21877189	chr15:21862349-21877189	0	-	21862349	21862349	8553170	8	271,221,71,138,107,174,115,353,	0,1009,2666,5247,6722,9657,9990,14487,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	21866209	21866316	chr15:21866209-21866316	3	-	21866209	21866209	8553170	1	107,	0,
#Partially deleted in new
chr15	21872068	21877703	chr15:21872068-21877703	0	-	21872068	21872068	8553170	4	112,115,192,83,	0,271,4768,5552,
#Partially deleted in new
chr15	21911558	21912590	chr15:21911558-21912590	7	-	21911558	21911558	16724991	1	1032,	0,
#Partially deleted in new
chr15	21927656	21946641	chr15:21927656-21946641	7	-	21927656	21927656	16724991	16	106,146,147,159,103,166,208,182,121,84,122,140,440,84,73,224,	0,3741,5105,7097,9686,9932,12194,12522,13282,14556,15103,15507,16005,17835,18153,18761,
#Partially deleted in new
chr15	21951241	21951323	chr15:21951241-21951323	3	+	21951241	21951241	5263520	1	82,	0,
#Partially deleted in new
chr15	21971705	21972645	chr15:21971705-21972645	7	+	21971705	21971705	16724991	1	940,	0,
#Partially deleted in new
chr15	21980276	21981245	chr15:21980276-21981245	7	-	21980276	21980276	16724991	1	969,	0,
#Partially deleted in new
chr15	21990079	22030986	chr15:21990079-22030986	1	+	21990079	21990079	8553170	6	72,158,109,147,23,61,	0,2775,11586,12257,40263,40846,
#Partially deleted in new
chr15	21990079	22059821	chr15:21990079-22059821	3	+	21990079	21990079	789624	7	72,158,109,95,96,89,190,	0,2775,11586,40846,68641,69241,69552,
#Partially deleted in new
chr15	21990079	22002534	chr15:21990079-22002534	0	+	21990079	21990079	8553170	4	72,158,109,198,	0,2775,11586,12257,
#Partially deleted in new
chr15	21990097	21994454	chr15:21990097-21994454	0	+	21990097	21990097	8553170	3	54,158,323,	0,2757,4034,
#Deleted in new
chr15	22009546	22010529	chr15:22009546-22010529	7	-	22009546	22009546	16724991	1	983,	0,
#Partially deleted in new
chr15	22015232	22095857	chr15:22015232-22095857	3	+	22094521	22095472	789624	7	99,95,389,96,89,204,1345,	0,15693,29204,43488,44088,44399,79280,
#Partially deleted in new
chr15	22015260	22059831	chr15:22015260-22059831	1	+	22015260	22015260	8553170	6	71,95,153,96,89,200,	0,15665,36274,43460,44060,44371,
#Deleted in new
chr15	22030899	22031846	chr15:22030899-22031846	7	-	22030899	22030899	16724991	1	947,	0,
#Deleted in new
chr15	22044475	22045400	chr15:22044475-22045400	7	+	22044475	22044475	16724991	1	925,	0,
#Deleted in new
chr15	22056708	22057638	chr15:22056708-22057638	7	+	22056708	22056708	16724991	1	930,	0,
#Partially deleted in new
chr15	22070240	22083221	chr15:22070240-22083221	0	+	22070240	22070240	8553170	4	214,53,245,175,	0,10355,10616,12806,
#Deleted in new
chr15	22080624	22081566	chr15:22080624-22081566	3	+	22080624	22081566	789624	1	942,	0,
#Deleted in new
chr15	22094521	22095472	chr15:22094521-22095472	3	+	22094521	22095472	789624	1	951,	0,
#Deleted in new
chr15	22125510	22126434	chr15:22125510-22126434	7	+	22125510	22125510	16724991	1	924,	0,
#Deleted in new
chr15	22145938	22148226	chr15:22145938-22148226	3	-	22145938	22145938	8553170	2	471,74,	0,2214,
#Deleted in new
chr15	22152275	22152897	chr15:22152275-22152897	7	-	22152275	22152275	16724991	1	622,	0,
#Deleted in new
chr15	22160430	22160868	chr15:22160430-22160868	3	-	22160430	22160868	789624	2	307,46,	0,392,
#Deleted in new
chr15	22178106	22178542	chr15:22178106-22178542	7	-	22178106	22178106	16724991	2	305,46,	0,390,
#Deleted in new
chr15	22184966	22185402	chr15:22184966-22185402	3	-	22184966	22185402	789624	2	307,46,	0,390,
#Partially deleted in new
chr15	22194884	22195317	chr15:22194884-22195317	7	-	22194884	22194884	16724991	2	305,43,	0,390,
#Deleted in new
chr15	22202391	22202734	chr15:22202391-22202734	7	-	22202391	22202391	16724991	1	343,	0,
#Deleted in new
chr15	22258137	22258848	chr15:22258137-22258848	7	+	22258137	22258137	16724991	1	711,	0,
#Partially deleted in new
chr15	22278970	22282872	chr15:22278970-22282872	7	+	22278970	22278970	16724991	2	304,74,	0,3828,
#Deleted in new
chr15	22360638	22360918	chr15:22360638-22360918	7	+	22360638	22360638	16724991	1	280,	0,
#Deleted in new
chr15	22371735	22373570	chr15:22371735-22373570	7	+	22371735	22371735	16724991	1	1835,	0,
#Deleted in new
chr15	22401207	22406944	chr15:22401207-22406944	7	+	22401207	22401207	16724991	4	200,58,61,3895,	0,925,1533,1842,
#Partially deleted in new
chr15	22427038	22436932	chr15:22427038-22436932	5	-	22427038	22427038	16724991	18	780,153,101,101,92,76,69,257,88,108,87,110,85,360,81,60,120,58,	0,865,1107,1290,1959,2482,3926,4262,4888,5171,5385,6495,6700,6873,8088,8352,8997,9836,
#Partially deleted in new
chr15	22427633	22437902	chr15:22427633-22437902	7	-	22427633	22427633	16724991	18	185,153,101,101,92,76,69,257,88,108,90,110,85,360,81,60,120,48,	0,270,512,695,1364,1887,3331,3667,4293,4576,4790,5900,6105,6278,7493,7757,8402,10221,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	22429199	22429489	chr15:22429199-22429489	3	-	22429199	22429199	8553170	1	290,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	22451208	22455154	chr15:22451208-22455154	7	+	22451208	22451208	16724991	3	157,1182,67,	0,1820,3879,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	22458902	22469230	chr15:22458902-22469230	3	+	22458993	22466825	789624	11	271,129,51,94,107,59,142,765,327,297,1749,	0,1917,3131,3270,3459,4938,5327,6120,6966,7626,8579,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	22459122	22469226	chr15:22459122-22469226	1	+	22459122	22466825	789624	9	51,129,51,94,107,59,142,1800,1745,	0,1697,2911,3050,3239,4718,5107,5903,8359,
#Partially deleted in new
chr15	22480438	22484840	chr15:22480438-22484840	7	-	22480438	22480438	16724991	4	173,125,227,234,	0,1539,1756,4168,
#Partially deleted in new
chr15	22495569	22579813	chr15:22495569-22579813	7	+	22495569	22495569	16724991	32	103,115,176,171,104,151,215,133,128,196,134,171,143,152,192,188,193,183,182,148,197,231,139,144,143,253,137,99,174,126,130,230,	0,21306,38498,41868,42423,43527,46425,46913,47153,47373,50197,50860,51108,51368,52311,58815,60442,61340,64219,65218,65688,65989,67379,68819,73579,77359,77709,78405,81589,81860,83778,84014,
#Partially deleted in new
chr15	22516908	22590815	chr15:22516908-22590815	5	+	22516908	22516908	16724991	32	82,176,171,104,151,215,133,128,196,134,171,143,152,192,188,193,183,182,148,197,231,139,144,143,253,137,99,174,126,140,48,873,	0,17159,20529,21084,22188,25086,25574,25814,26034,28858,29521,29769,30029,30972,37476,39103,40001,42880,43879,44349,44650,46040,47480,52240,56020,56370,57066,60250,60521,62675,70435,73034,
#Partially deleted in new
chr15	22561433	22564467	chr15:22561433-22564467	4	+	22561433	22561433	16724991	5	21,376,89,139,79,	0,125,1209,1515,2955,
#Partially deleted in new
chr15	22573402	22577534	chr15:22573402-22577534	4	+	22573402	22573402	16724991	6	13,99,53,91,174,105,	0,572,1257,2712,3756,4027,
#Partially deleted in new
chr15	22579678	22587876	chr15:22579678-22587876	4	+	22579678	22579678	16724991	2	45,533,	0,7665,
#Deleted in new
chr15	22606021	22608126	chr15:22606021-22608126	5	-	22606021	22606021	16724991	3	1694,156,76,	0,1778,2029,
#Partially deleted in new
chr15	22607539	22617756	chr15:22607539-22617756	7	-	22607539	22607539	16724991	18	176,156,98,101,92,76,69,257,88,108,87,110,85,288,81,60,120,48,	0,260,511,691,1366,1889,3213,3537,4162,4445,4659,5635,5840,6013,7154,7416,8379,10169,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	22609140	22609377	chr15:22609140-22609377	3	-	22609140	22609140	8553170	1	237,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	22610352	22617854	chr15:22610352-22617854	5	-	22610352	22610352	16724991	12	469,257,88,108,87,110,85,288,81,60,120,146,	0,724,1349,1632,1846,2822,3027,3200,4341,4603,5566,7356,
#Partially deleted in new
chr15	22664358	22681605	chr15:22664358-22681605	5	+	22664358	22664358	16724991	8	602,157,151,170,166,187,87,89,	0,3539,7098,8331,10062,13838,16817,17158,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	22664678	22686213	chr15:22664678-22686213	7	+	22664678	22664678	16724991	11	656,157,151,159,170,166,130,187,87,89,2542,	0,3219,6778,7628,8011,9742,12126,13518,16497,16838,18993,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	22665127	22675118	chr15:22665127-22675118	4	+	22665127	22665127	16724991	4	207,157,151,2429,	0,2770,6329,7562,
#Deleted in new
chr15	22681093	22681885	chr15:22681093-22681885	4	+	22681093	22681093	16724991	2	169,369,	0,423,
#Deleted in new
chr15	22690453	22691158	chr15:22690453-22691158	7	-	22690453	22690453	16724991	1	705,	0,
#Deleted in new
chr15	22714341	22717727	chr15:22714341-22717727	7	+	22714341	22714341	16724991	2	68,69,	0,3317,
#Deleted in new
chr15	22714938	22715225	chr15:22714938-22715225	7	+	22714938	22714938	16724991	1	287,	0,
#Partially deleted in new
chr15	22727103	22744699	chr15:22727103-22744699	7	+	22727103	22727103	16724991	7	124,178,112,170,249,135,96,	0,3357,5569,6877,13956,15359,17500,
#Partially deleted in new
chr15	22741179	22744918	chr15:22741179-22744918	5	+	22741179	22741179	16724991	3	129,135,315,	0,1283,3424,
#Partially deleted in new
chr15	22756171	22756729	chr15:22756171-22756729	7	-	22756171	22756171	16724991	2	39,215,	0,343,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	22757856	22778741	chr15:22757856-22778741	3	+	22757856	22757856	789624	5	138,103,135,98,975,	0,962,6367,16359,19910,
#Partially deleted in new
chr15	22757958	22764514	chr15:22757958-22764514	0	+	22757958	22757958	8553170	3	36,103,291,	0,860,6265,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	22758492	22764516	chr15:22758492-22764516	0	+	22758492	22758492	8553170	3	33,103,293,	0,326,5731,
#Partially deleted in new
chr15	22770522	22776058	chr15:22770522-22776058	7	-	22770522	22770522	16724991	7	405,142,59,283,51,129,84,	0,698,1169,2482,2853,4018,5452,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	22773062	22829789	chr15:22773062-22829789	1	+	22810795	22824239	789624	5	1251,48,91,161,6062,	0,37686,39100,47250,50665,
#Deleted in new
chr15	22773096	22776120	chr15:22773096-22776120	4	-	22773096	22773096	16724991	6	15,94,51,172,129,146,	0,97,279,599,1444,2878,
#Deleted in new
chr15	22773193	22776199	chr15:22773193-22776199	5	-	22773193	22773193	16724991	5	94,51,30,129,225,	0,182,502,1347,2781,
#Deleted in new
chr15	22774383	22776120	chr15:22774383-22776120	4	-	22774383	22774383	16724991	2	286,146,	0,1591,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	22785898	22824752	chr15:22785898-22824752	1	+	22810795	22824239	789624	5	350,48,91,161,1025,	0,24850,26264,34414,37829,
#Partially deleted in new
chr15	22786217	22823771	chr15:22786217-22823771	0	+	22786217	22786217	8553170	7	31,48,91,71,129,161,44,	0,24531,25945,27865,33070,34095,37510,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	22786631	22829791	chr15:22786631-22829791	3	+	22786656	22824239	789624	5	203,48,91,161,6064,	0,24117,25531,33681,37096,
#Partially deleted in new
chr15	22786757	22811046	chr15:22786757-22811046	0	+	22786757	22786757	8553170	2	77,298,	0,23991,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	22786766	22826076	chr15:22786766-22826076	0	+	22786766	22813696	789624	6	68,48,91,82,161,2349,	0,23982,25396,26866,33546,36961,
#Partially deleted in new
chr15	22786812	22823916	chr15:22786812-22823916	0	+	22786812	22814098	789624	6	22,48,91,71,161,189,	0,23936,25350,27270,33500,36915,
#Partially deleted in new
chr15	22838640	22868384	chr15:22838640-22868384	3	+	22851731	22866847	789624	7	281,136,232,57,91,161,2172,	0,1014,12998,14571,19899,21988,27572,
#Partially deleted in new
chr15	22838643	22851665	chr15:22838643-22851665	0	+	22838643	22838643	8553170	4	304,136,122,27,	0,1011,6502,12995,
#Partially deleted in new
chr15	22838657	22866847	chr15:22838657-22866847	1	+	22851731	22866847	789624	6	290,122,232,91,161,635,	0,6488,12981,19882,21971,27555,
#Partially deleted in new
chr15	22838659	22868384	chr15:22838659-22868384	1	+	22851731	22866847	789624	8	262,136,122,232,57,91,161,2172,	0,995,6486,12979,14552,19880,21969,27553,
#Partially deleted in new
chr15	22838659	22851661	chr15:22838659-22851661	0	+	22838659	22838659	8553170	4	262,113,136,23,	0,402,995,12979,
#Partially deleted in new
chr15	22838675	22851676	chr15:22838675-22851676	0	+	22838675	22838675	8553170	3	499,136,38,	0,979,12963,
#Partially deleted in new
chr15	22838686	22867716	chr15:22838686-22867716	1	+	22851731	22866847	789624	6	235,232,57,91,161,1504,	0,12952,14525,19853,21942,27526,
#Partially deleted in new
chr15	22838688	22851726	chr15:22838688-22851726	0	+	22838688	22838688	8553170	2	486,88,	0,12950,
#Partially deleted in new
chr15	22838689	22853249	chr15:22838689-22853249	0	+	22851731	22853249	789624	4	232,122,162,38,	0,6456,13019,14522,
#Partially deleted in new
chr15	22838697	22866916	chr15:22838697-22866916	1	+	22851731	22866847	789624	5	224,232,91,161,704,	0,12941,19842,21931,27515,
#Partially deleted in new
chr15	22867051	22980335	chr15:22867051-22980335	3	-	22870027	22947285	0	31	3141,148,239,95,73,131,91,144,88,200,120,109,77,97,157,154,148,167,126,123,118,92,105,129,97,182,102,78,90,123,49,	0,5773,6439,7498,8147,12861,14794,15816,25838,36654,42142,43468,43685,45127,47674,49425,50736,51640,58930,60854,65171,66750,70052,72140,72359,76121,77506,77810,79951,80117,113235,
#Partially deleted in new
chr15	22867124	22917313	chr15:22867124-22917313	1	-	22870027	22917011	0	16	3068,148,239,95,73,131,91,144,88,200,120,109,77,97,157,837,	0,5700,6366,7425,8074,12788,14721,15743,25765,36581,42069,43395,43612,45054,47601,49352,
#Partially deleted in new
chr15	22869465	22980352	chr15:22869465-22980352	1	-	22870027	22947285	0	32	727,148,239,95,73,131,91,144,88,200,120,109,77,97,157,154,148,167,126,123,118,92,105,129,97,182,102,78,90,123,119,66,	0,3359,4025,5084,5733,10447,12380,13402,23424,34240,39728,41054,41271,42713,45260,47011,48322,49226,56516,58440,62757,64336,67638,69726,69945,73707,75092,75396,77537,77703,78445,110821,
#Partially deleted in new
chr15	22869465	22905440	chr15:22869465-22905440	0	-	22869465	22869465	8553170	10	727,148,239,95,73,131,91,144,88,1735,	0,3359,4025,5084,5733,10447,12380,13402,23424,34240,
#Partially deleted in new
chr15	22872636	22875235	chr15:22872636-22875235	0	-	22872812	22875235	789624	4	336,239,95,37,	0,854,1913,2562,
#Partially deleted in new
chr15	22873680	22875462	chr15:22873680-22875462	0	-	22873680	22873680	8553170	3	49,95,264,	0,869,1518,
#Partially deleted in new
chr15	22903757	22915103	chr15:22903757-22915103	0	-	22903757	22903757	8553170	6	148,120,109,77,97,378,	0,5436,6762,6979,8421,10968,
#Partially deleted in new
chr15	22909193	22912386	chr15:22909193-22912386	0	-	22909193	22909193	8553170	4	120,109,77,208,	0,1326,1543,2985,
#Partially deleted in new
chr15	22914826	22926015	chr15:22914826-22926015	0	-	22914826	22926015	789624	5	56,148,148,167,34,	0,2055,2961,3865,11155,
#Deleted in new
chr15	22916482	22917909	chr15:22916482-22917909	0	-	22917772	22917909	789624	3	148,148,287,	0,399,1140,
#Partially deleted in new
chr15	22943228	22946987	chr15:22943228-22946987	0	-	22943228	22943228	8553170	4	126,102,78,279,	0,1329,1633,3480,
#Partially deleted in new
chr15	22943258	22981063	chr15:22943258-22981063	0	-	22943258	22947285	789624	6	96,102,78,90,123,55,	0,1299,1603,3744,3910,37750,
#Partially deleted in new
chr15	22943288	22980382	chr15:22943288-22980382	0	-	22943288	22947285	789624	6	66,102,78,90,150,96,	0,1269,1573,3714,3880,36998,
#Partially deleted in new
chr15	22944596	22980348	chr15:22944596-22980348	0	-	22946813	22947285	789624	6	63,78,132,90,150,62,	0,265,2112,2406,2572,35690,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr15	22983191	23039569	chr15:22983191-23039569	0	-	22996905	23039543	789624	24	420,114,101,89,126,179,121,85,183,189,199,269,116,203,247,94,90,115,136,80,97,109,54,172,	0,13653,17377,19873,20910,22240,22860,23076,25507,26753,27941,34581,36027,38767,40755,41545,42924,44000,47693,48758,49536,53705,53907,56206,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr15	22999175	23039673	chr15:22999175-23039673	3	-	22999819	23039543	789624	23	691,101,89,126,179,121,85,183,189,199,269,116,203,247,94,90,115,136,80,97,109,54,276,	0,1393,3889,4926,6256,6876,7092,9523,10769,11957,18597,20043,22783,24771,25561,26940,28016,31709,32774,33552,37721,37923,40222,
#Partially deleted in new
chr15	23000283	23039572	chr15:23000283-23039572	1	-	23000521	23039543	789624	22	386,89,126,179,121,85,183,189,199,269,116,203,247,94,90,115,136,80,97,109,54,175,	0,2781,3818,5148,5768,5984,8415,9661,10849,17489,18935,21675,23663,24453,25832,26908,30601,31666,32444,36613,36815,39114,
#Partially deleted in new
chr15	23003090	23004570	chr15:23003090-23004570	0	-	23003090	23003090	8553170	2	63,469,	0,1011,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	23005431	23008881	chr15:23005431-23008881	0	-	23005431	23008881	789624	5	179,121,85,108,183,	0,620,836,3026,3267,
#Partially deleted in new
chr15	23005798	23008797	chr15:23005798-23008797	0	-	23005798	23005798	8553170	3	374,85,99,	0,469,2900,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	23009959	23024376	chr15:23009959-23024376	0	-	23009959	23009959	8553170	6	174,199,269,162,203,1304,	0,1173,7813,9259,11999,13113,
#Partially deleted in new
chr15	23026122	23036964	chr15:23026122-23036964	0	-	23026122	23036964	789624	6	83,118,136,80,97,68,	0,1069,4762,5827,6605,10774,
#Partially deleted in new
chr15	23026176	23036948	chr15:23026176-23036948	0	-	23026176	23036948	789624	6	29,106,136,80,97,52,	0,1015,4708,5773,6551,10720,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	23083093	23095402	chr15:23083093-23095402	7	+	23083093	23083093	16724991	8	78,41,73,46,181,100,158,117,	0,377,876,1656,5563,7638,9102,12192,
#Partially deleted in new
chr15	23090723	23121324	chr15:23090723-23121324	5	+	23090723	23090723	16724991	4	108,156,142,67,	0,1472,29525,30534,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	23128267	23136822	chr15:23128267-23136822	3	-	23128789	23136731	789624	9	546,1203,142,59,107,94,51,129,289,	0,1202,3062,3534,4971,5173,5355,6491,8266,
#Partially deleted in new
chr15	23140562	23144422	chr15:23140562-23144422	7	-	23140562	23140562	16724991	4	67,141,384,76,	0,926,1724,3784,
#Partially deleted in new
chr15	23157365	23170711	chr15:23157365-23170711	7	+	23157365	23157365	16724991	18	146,120,60,81,360,85,110,90,108,88,257,69,76,92,101,101,153,3144,	0,1845,2550,2793,3729,4177,4357,5487,5683,5987,6463,6987,8424,8931,9591,9774,9964,10202,
#Partially deleted in new
chr15	23157427	23167749	chr15:23157427-23167749	5	+	23157427	23157427	16724991	19	84,120,60,81,39,48,85,110,90,108,88,257,69,86,92,101,101,158,182,	0,1783,2488,2731,3667,3979,4115,4295,5425,5621,5925,6401,6925,8362,8869,9529,9712,9897,10140,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	23165896	23166186	chr15:23165896-23166186	3	+	23165896	23165896	8553170	1	290,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	23179868	23182049	chr15:23179868-23182049	7	+	23179868	23179868	16724991	1	2181,	0,
#Deleted in new
chr15	23193490	23193696	chr15:23193490-23193696	7	+	23193490	23193490	16724991	1	206,	0,
#Deleted in new
chr15	23197826	23197920	chr15:23197826-23197920	3	+	23197826	23197826	5263520	1	94,	0,
#Deleted in new
chr15	23225875	23226391	chr15:23225875-23226391	7	-	23225875	23225875	16724991	2	220,180,	0,336,
#Partially deleted in new
chr15	23289302	23293667	chr15:23289302-23293667	7	-	23289302	23289302	16724991	4	173,125,227,201,	0,1534,1751,4164,
#Partially deleted in new
chr15	23309606	23313276	chr15:23309606-23313276	5	+	23309606	23309606	16724991	6	129,110,172,175,125,172,	0,581,1196,1731,1998,3498,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	23310880	23314566	chr15:23310880-23314566	7	+	23310880	23310880	16724991	4	94,175,125,1462,	0,457,724,2224,
#Partially deleted in new
chr15	23326255	23334127	chr15:23326255-23334127	5	-	23326255	23326255	16724991	10	23,262,837,142,59,107,94,51,129,112,	0,679,1066,2556,3028,4465,4667,4849,5985,7760,
#Partially deleted in new
chr15	23328812	23332353	chr15:23328812-23332353	6	-	23328812	23328812	16724991	6	141,59,107,94,51,113,	0,471,1908,2110,2292,3428,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	23337984	23341848	chr15:23337984-23341848	7	-	23337984	23337984	16724991	4	73,142,379,88,	0,930,1725,3776,
#Partially deleted in new
chr15	23354747	23367231	chr15:23354747-23367231	0	+	23354747	23354747	5263520	18	146,120,60,81,360,85,110,90,108,88,236,69,76,92,101,98,156,2273,	0,1843,2548,2791,3724,4172,4352,5481,5677,5980,6473,6976,8417,8930,9595,9778,9971,10211,
#Partially deleted in new
chr15	23354845	23365134	chr15:23354845-23365134	3	+	23354845	23365134	789624	19	48,120,60,81,39,48,85,110,87,108,88,236,69,76,92,101,98,156,176,	0,1745,2450,2693,3626,3938,4074,4254,5386,5579,5882,6375,6878,8319,8832,9497,9680,9873,10113,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	23363271	23363561	chr15:23363271-23363561	3	+	23363271	23363271	8553170	1	290,	0,
#Partially deleted in new
chr15	23430838	23435212	chr15:23430838-23435212	7	+	23430838	23430838	16724991	4	203,227,125,181,	0,2388,2707,4193,
#Partially deleted in new
chr15	23439497	23447234	chr15:23439497-23447234	3	-	23439542	23447145	789624	9	369,165,142,59,297,51,30,129,137,	0,2020,2481,2952,4279,4664,4973,5812,7600,
#Partially deleted in new
chr15	23439497	23447234	chr15:23439497-23447234	1	-	23439744	23441655	789624	8	381,838,80,59,297,51,129,137,	0,1347,2481,2952,4279,4664,5812,7600,
#Partially deleted in new
chr15	23439497	23447234	chr15:23439497-23447234	0	-	23442051	23447181	789624	7	2185,80,59,297,51,129,137,	0,2481,2952,4279,4664,5812,7600,
#Partially deleted in new
chr15	23439497	23447234	chr15:23439497-23447234	1	-	23439744	23447181	789624	8	2185,142,59,297,51,30,129,137,	0,2481,2952,4279,4664,4973,5812,7600,
#Deleted in new
chr15	23562061	23562131	chr15:23562061-23562131	3	-	23562061	23562061	5263520	1	70,	0,
#Deleted in new
chr15	23565673	23568020	chr15:23565673-23568020	3	+	23565782	23567306	789624	1	2347,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	23565677	23575482	chr15:23565677-23575482	0	+	23565677	23565677	8553170	3	156,177,137,	0,1130,9668,
#Partially deleted in new
chr15	23565679	23628534	chr15:23565679-23628534	1	+	23565782	23627831	8553170	2	154,769,	0,62086,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	23565716	23611564	chr15:23565716-23611564	1	+	23565782	23610636	789624	2	371,941,	0,44907,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	23565732	23629778	chr15:23565732-23629778	1	+	23565782	23627769	8553170	3	355,177,2013,	0,1075,62033,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	23565772	23575482	chr15:23565772-23575482	1	+	23565782	23575412	789624	3	315,177,137,	0,1035,9573,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	23566456	23630075	chr15:23566456-23630075	0	+	23566456	23566843	8553170	3	253,177,2310,	0,351,61309,
#Deleted in new
chr15	23567263	23569657	chr15:23567263-23569657	3	-	23567263	23567263	8553170	2	205,361,	0,2033,
#Deleted in new
chr15	23643548	23647846	chr15:23643548-23647846	1	-	23643992	23647742	789624	1	4298,	0,
#Deleted in new
chr15	23643548	23647867	chr15:23643548-23647867	3	-	23643992	23647742	8553170	1	4319,	0,
#Deleted in new
chr15	23685399	23687330	chr15:23685399-23687330	3	-	23686251	23687217	789624	1	1931,	0,
#Deleted in new
chr15	23685678	23687305	chr15:23685678-23687305	1	-	23686251	23687217	789624	1	1627,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	23777436	23777543	chr15:23777436-23777543	3	-	23777436	23777436	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	24162753	24169874	chr15:24162753-24169874	0	-	24162753	24162753	8553170	2	529,102,	0,7019,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	24162754	24169857	chr15:24162754-24169857	0	-	24162754	24162754	8553170	2	266,85,	0,7018,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	24164776	24169948	chr15:24164776-24169948	3	-	24164776	24164776	789624	2	4119,176,	0,4996,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	24206783	24225854	chr15:24206783-24225854	3	+	24206783	24206783	8553170	3	110,332,114,	0,18512,18957,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	24235077	24275015	chr15:24235077-24275015	3	+	24235077	24235077	8553170	3	82,141,225,	0,22039,39713,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	24238144	24240192	chr15:24238144-24240192	3	-	24238144	24238144	8553170	2	222,250,	0,1798,
#Partially deleted in new
chr15	24261278	24276829	chr15:24261278-24276829	1	+	24261278	24261278	8553170	3	54,162,363,	0,13512,15188,
#Deleted in new
chr15	24299748	24300638	chr15:24299748-24300638	3	+	24299748	24299748	8553170	2	21,394,	0,496,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	24441126	24447967	chr15:24441126-24447967	3	+	24441126	24441126	789624	4	74,244,141,390,	0,1621,3366,6451,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	24493136	24513144	chr15:24493136-24513144	1	+	24493136	24493136	8553170	5	192,140,187,134,165,	0,14202,14817,15724,19843,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	24513069	24533908	chr15:24513069-24533908	1	+	24513069	24513069	8553170	3	104,115,214,	0,553,20625,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	24521680	24533908	chr15:24521680-24533908	0	+	24521680	24521680	8553170	2	150,214,	0,12014,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	24547795	24566780	chr15:24547795-24566780	1	+	24547795	24547795	8553170	4	129,87,124,125,	0,588,18293,18860,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	24558151	24587779	chr15:24558151-24587779	1	+	24558151	24558151	789624	9	170,145,286,27,97,304,97,104,213,	0,8504,9745,11631,11880,16358,16755,22075,29415,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	24558157	24559592	chr15:24558157-24559592	1	+	24558157	24558157	8553170	1	1435,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	24558171	24574527	chr15:24558171-24574527	1	+	24558171	24558171	8553170	6	150,124,145,27,97,18,	0,7917,8484,11611,11860,16338,
#Partially deleted in new
chr15	24558216	24568121	chr15:24558216-24568121	1	+	24558216	24558216	8553170	3	105,145,230,	0,8439,9675,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	24570025	24587773	chr15:24570025-24587773	1	+	24570025	24570025	8553170	4	103,235,97,207,	0,4484,4881,17541,
#Partially deleted in new
chr15	24574951	24652130	chr15:24574951-24652130	3	+	24574951	24574951	8553170	4	52,104,142,91,	0,5275,49016,77088,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	24587596	24652116	chr15:24587596-24652116	1	+	24587596	24587596	8553170	3	139,138,82,	0,36371,64438,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	24675867	24683393	chr15:24675867-24683393	3	+	24675867	24679338	789624	1	7526,	0,
#Partially deleted in new
chr15	24823636	24967985	chr15:24823636-24967985	0	+	24823636	24823636	8553170	5	187,74,114,96,54,	0,62879,96374,138477,144295,
#Partially deleted in new
chr15	24823646	24978582	chr15:24823646-24978582	3	+	24974453	24978444	0	13	204,108,74,114,96,151,146,152,112,153,139,126,176,	0,6151,62869,96364,138467,144285,150664,151711,152658,153230,154131,154546,154760,
#Partially deleted in new
chr15	24848354	24852248	chr15:24848354-24852248	3	+	24848354	24848354	8553170	3	99,146,554,	0,1634,3340,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	24848356	24852253	chr15:24848356-24852253	0	+	24848356	24848356	8553170	1	3897,	0,
#Partially deleted in new
chr15	24856550	24978582	chr15:24856550-24978582	1	+	24974453	24978444	0	12	166,74,114,96,151,146,152,112,153,139,126,176,	0,29965,63460,105563,111381,117760,118807,119754,120326,121227,121642,121856,
#Partially deleted in new
chr15	24856600	24974434	chr15:24856600-24974434	0	+	24856600	24856600	8553170	8	116,74,114,75,99,96,151,124,	0,29915,63410,63872,64556,105513,111331,117710,
#Partially deleted in new
chr15	24908931	24909825	chr15:24908931-24909825	7	-	24908931	24908931	16724991	1	894,	0,
#Partially deleted in new
chr15	24910873	24911125	chr15:24910873-24911125	7	-	24910873	24910873	16724991	1	252,	0,
#Partially deleted in new
chr15	24954926	24978723	chr15:24954926-24978723	1	+	24974453	24978444	0	10	136,96,151,146,152,112,153,139,126,317,	0,7187,13005,19384,20431,21378,21950,22851,23266,23480,
#Partially deleted in new
chr15	24954934	24978583	chr15:24954934-24978583	1	+	24974453	24978444	0	10	128,96,151,70,152,112,153,139,126,177,	0,7179,12997,19452,20423,21370,21942,22843,23258,23472,
#Partially deleted in new
chr15	24954934	24976327	chr15:24954934-24976327	0	+	24974453	24976327	789624	7	128,96,212,151,146,152,23,	0,7179,12094,12997,19376,20423,21370,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	24954947	24978539	chr15:24954947-24978539	1	+	24974942	24978444	0	12	115,96,124,151,146,316,152,112,153,139,126,133,	0,7166,12081,12984,19363,19694,20410,21357,21929,22830,23245,23459,
#Partially deleted in new
chr15	24954985	24968408	chr15:24954985-24968408	1	+	24955048	24968037	789624	3	77,96,477,	0,7128,12946,
#Partially deleted in new
chr15	24955002	24977865	chr15:24955002-24977865	0	+	24974453	24977865	789624	8	60,96,151,59,152,112,153,88,	0,7111,12929,19395,20355,21302,21874,22775,
#Partially deleted in new
chr15	24955003	24977850	chr15:24955003-24977850	0	+	24955048	24968037	789624	7	59,96,151,152,112,153,73,	0,7110,12928,20354,21301,21873,22774,
#Partially deleted in new
chr15	24955004	24978548	chr15:24955004-24978548	1	+	24974453	24978444	0	10	58,96,151,169,152,112,153,139,126,142,	0,7109,12927,19283,20353,21300,21872,22773,23188,23402,
#Partially deleted in new
chr15	24955013	24968829	chr15:24955013-24968829	3	+	24955048	24968037	789624	4	49,96,151,35,	0,7100,12918,13781,
#Partially deleted in new
chr15	24955033	25000276	chr15:24955033-25000276	3	+	24955048	24968037	789624	8	29,96,151,107,138,663,109,32,	0,7080,12898,24502,24913,26741,43936,45211,
#Partially deleted in new
chr15	24955033	25000276	chr15:24955033-25000276	0	+	24955048	24977781	789624	7	29,96,139,126,138,109,32,	0,7080,22744,23159,24913,43936,45211,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	24978582	24983786	chr15:24978582-24983786	0	+	24978582	24978582	8553170	3	1060,138,2012,	0,1364,3192,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	24979556	25022666	chr15:24979556-25022666	1	+	24979556	24979556	8553170	11	86,138,663,121,109,130,356,164,122,42,2077,	0,390,2218,18809,19413,20688,21801,23168,39470,40271,41033,
#Deleted in new
chr15	24981993	24982068	chr15:24981993-24982068	3	+	24981993	24981993	789624	1	75,	0,
#Partially deleted in new
chr15	24981993	25002830	chr15:24981993-25002830	0	+	24981993	24981993	8553170	2	444,106,	0,20731,
#Deleted in new
chr15	24984863	24985173	chr15:24984863-24985173	3	+	24984863	24984863	8553170	1	310,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	24985052	24988232	chr15:24985052-24988232	3	+	24985052	24985052	789624	1	3180,	0,
#Deleted in new
chr15	24985099	24985166	chr15:24985099-24985166	3	+	24985099	24985099	789624	1	67,	0,
#Deleted in new
chr15	24986924	24986995	chr15:24986924-24986995	3	+	24986924	24986924	789624	1	71,	0,
#Deleted in new
chr15	24991485	24991753	chr15:24991485-24991753	3	+	24991485	24991485	8553170	1	268,	0,
#Partially deleted in new
chr15	25000304	25020825	chr15:25000304-25020825	1	+	25000304	25000304	8553170	4	70,122,42,236,	0,18722,19523,20285,
#Partially deleted in new
chr15	25000313	25002404	chr15:25000313-25002404	0	+	25000313	25000313	8553170	2	61,1047,	0,1044,
#Partially deleted in new
chr15	25019034	25053916	chr15:25019034-25053916	1	+	25019034	25019034	8553170	5	114,42,172,135,89,	0,793,1555,32067,34793,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	25027735	25032047	chr15:25027735-25032047	3	-	25027735	25027735	8553170	2	197,230,	0,4082,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	25031872	25036490	chr15:25031872-25036490	3	+	25031872	25031872	789624	1	4618,	0,
#Boundary problem: need 38, got 0, diff 38, mapped 0.0
chr15	25041688	25120432	chr15:25041688-25120432	1	+	25041688	25041688	8553170	38	1222,135,140,140,140,262,139,141,140,139,160,132,134,134,254,134,117,132,133,2400,130,141,202,119,112,3003,112,131,117,129,106,206,161,130,358,106,115,1368,	0,9413,12139,14794,17466,17768,20261,23026,28431,31036,32203,34046,35168,37173,38137,39402,40900,41707,43501,45778,49901,52145,53938,55632,57028,57456,62170,64475,65783,66221,67309,67509,67866,70076,73610,75721,76579,77376,
#Deleted in new
chr15	25041917	25042428	chr15:25041917-25042428	0	+	25041917	25041917	8553170	1	511,	0,
#Deleted in new
chr15	25041973	25042040	chr15:25041973-25042040	3	+	25041973	25041973	789624	1	67,	0,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr15	25050631	25122476	chr15:25050631-25122476	1	+	25050631	25050631	8553170	33	91,167,139,141,140,139,160,132,134,134,134,117,132,133,133,99,130,141,119,112,134,112,131,117,129,106,206,161,130,358,106,115,3412,	0,8920,11318,14083,19488,22093,23260,25103,26225,28230,30459,31957,32764,34558,36835,39280,40958,43202,46689,48085,48513,53227,55532,56840,57278,58366,58566,58923,61133,64667,66778,67636,68433,
#Deleted in new
chr15	25051088	25056565	chr15:25051088-25056565	1	+	25051088	25051088	8553170	5	148,98,140,157,83,	0,2177,2739,3985,5394,
#Deleted in new
chr15	25051476	25051571	chr15:25051476-25051571	3	+	25051476	25051476	789624	1	95,	0,
#Deleted in new
chr15	25054209	25054304	chr15:25054209-25054304	3	+	25054209	25054209	789624	1	95,	0,
#Deleted in new
chr15	25056859	25056954	chr15:25056859-25056954	3	+	25056859	25056859	789624	1	95,	0,
#Deleted in new
chr15	25059537	25059633	chr15:25059537-25059633	3	+	25059537	25059537	789624	1	96,	0,
#Deleted in new
chr15	25062332	25062427	chr15:25062332-25062427	3	+	25062332	25062332	789624	1	95,	0,
#Deleted in new
chr15	25064770	25074051	chr15:25064770-25074051	1	+	25064770	25064770	8553170	5	85,120,134,139,160,	0,2641,5355,7954,9121,
#Deleted in new
chr15	25065025	25065121	chr15:25065025-25065121	3	+	25065025	25065025	789624	1	96,	0,
#Deleted in new
chr15	25067787	25067882	chr15:25067787-25067882	3	+	25067787	25067787	789624	1	95,	0,
#Deleted in new
chr15	25070431	25070526	chr15:25070431-25070526	3	+	25070431	25070431	789624	1	95,	0,
#Deleted in new
chr15	25073106	25073201	chr15:25073106-25073201	3	+	25073106	25073106	789624	1	95,	0,
#Deleted in new
chr15	25074113	25074215	chr15:25074113-25074215	3	+	25074113	25074113	789624	1	102,	0,
#Deleted in new
chr15	25075928	25076020	chr15:25075928-25076020	3	+	25075928	25075928	789624	1	92,	0,
#Deleted in new
chr15	25077050	25077142	chr15:25077050-25077142	3	+	25077050	25077050	789624	1	92,	0,
#Deleted in new
chr15	25079057	25079149	chr15:25079057-25079149	3	+	25079057	25079057	789624	1	92,	0,
#Deleted in new
chr15	25080141	25080233	chr15:25080141-25080233	3	+	25080141	25080141	789624	1	92,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr15	25081153	25113927	chr15:25081153-25113927	1	+	25081153	25081153	8553170	17	71,117,132,133,133,253,130,141,119,112,134,2436,117,129,106,206,4373,	0,1435,2242,4036,6313,8460,10436,12680,16167,17563,17991,22705,26318,26756,27844,28044,28401,
#Deleted in new
chr15	25081286	25081378	chr15:25081286-25081378	3	+	25081286	25081286	789624	1	92,	0,
#Deleted in new
chr15	25082767	25082859	chr15:25082767-25082859	3	+	25082767	25082767	789624	1	92,	0,
#Deleted in new
chr15	25083587	25083679	chr15:25083587-25083679	3	+	25083587	25083587	789624	1	92,	0,
#Partially deleted in new
chr15	25085270	25110455	chr15:25085270-25110455	1	+	25085270	25085270	8553170	17	52,133,253,130,141,102,119,112,134,112,131,117,129,106,206,161,70,	0,2196,4343,6319,8563,10356,12050,13446,13874,18588,20893,22201,22639,23727,23927,24284,25115,
#Deleted in new
chr15	25085384	25085476	chr15:25085384-25085476	3	+	25085384	25085384	789624	1	92,	0,
#Deleted in new
chr15	25086526	25086618	chr15:25086526-25086618	3	+	25086526	25086526	789624	1	92,	0,
#Deleted in new
chr15	25087660	25088896	chr15:25087660-25088896	3	+	25087660	25087660	8553170	1	1236,	0,
#Deleted in new
chr15	25087661	25087753	chr15:25087661-25087753	3	+	25087661	25087661	789624	1	92,	0,
#Deleted in new
chr15	25088803	25088895	chr15:25088803-25088895	3	+	25088803	25088803	789624	1	92,	0,
#Deleted in new
chr15	25089922	25090014	chr15:25089922-25090014	3	+	25089922	25089922	789624	1	92,	0,
#Deleted in new
chr15	25091785	25091877	chr15:25091785-25091877	3	+	25091785	25091785	789624	1	92,	0,
#Deleted in new
chr15	25091959	25092377	chr15:25091959-25092377	3	-	25091959	25091959	8553170	1	418,	0,
#Deleted in new
chr15	25091960	25092377	chr15:25091960-25092377	0	-	25091960	25091960	8553170	1	417,	0,
#Deleted in new
chr15	25094036	25094128	chr15:25094036-25094128	3	+	25094036	25094036	789624	1	92,	0,
#Deleted in new
chr15	25097662	25097754	chr15:25097662-25097754	3	+	25097662	25097662	789624	1	92,	0,
#Deleted in new
chr15	25099498	25099594	chr15:25099498-25099594	3	+	25099498	25099498	789624	1	96,	0,
#Deleted in new
chr15	25101574	25101666	chr15:25101574-25101666	3	+	25101574	25101574	789624	1	92,	0,
#Deleted in new
chr15	25104641	25104732	chr15:25104641-25104732	3	+	25104641	25104641	789624	1	91,	0,
#Deleted in new
chr15	25106520	25106603	chr15:25106520-25106603	3	+	25106520	25106520	789624	1	83,	0,
#Deleted in new
chr15	25108267	25108352	chr15:25108267-25108352	3	+	25108267	25108267	789624	1	85,	0,
#Deleted in new
chr15	25116544	25120051	chr15:25116544-25120051	0	+	25116544	25116544	789624	3	971,115,987,	0,1723,2520,
#Partially deleted in new
chr15	25117471	25172996	chr15:25117471-25172996	1	+	25117471	25117471	8553170	6	44,115,131,45,131,47,	0,796,53064,53576,54976,55478,
#Deleted in new
chr15	25130977	25131337	chr15:25130977-25131337	3	+	25130977	25130977	8553170	1	360,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	25135641	25138055	chr15:25135641-25138055	3	+	25135641	25135641	789624	1	2414,	0,
#Deleted in new
chr15	25159220	25159279	chr15:25159220-25159279	3	+	25159220	25159220	8553170	1	59,	0,
#Deleted in new
chr15	25169336	25169676	chr15:25169336-25169676	7	-	25169336	25169336	16724991	1	340,	0,
#Deleted in new
chr15	25170722	25170804	chr15:25170722-25170804	3	+	25170722	25170722	789624	1	82,	0,
#Deleted in new
chr15	25172634	25172716	chr15:25172634-25172716	3	+	25172634	25172634	789624	1	82,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	25172978	25182051	chr15:25172978-25182051	1	+	25172978	25172978	8553170	8	121,58,45,43,132,44,132,33,	0,1834,2260,4178,5571,6085,7330,9040,
#Deleted in new
chr15	25174926	25175008	chr15:25174926-25175008	3	+	25174926	25174926	789624	1	82,	0,
#Deleted in new
chr15	25176831	25176913	chr15:25176831-25176913	3	+	25176831	25176831	789624	1	82,	0,
#Deleted in new
chr15	25178737	25178819	chr15:25178737-25178819	3	+	25178737	25178737	789624	1	82,	0,
#Deleted in new
chr15	25180313	25182708	chr15:25180313-25182708	0	+	25180313	25180313	8553170	4	127,86,87,512,	0,1496,1705,1883,
#Deleted in new
chr15	25180496	25180578	chr15:25180496-25180578	3	+	25180496	25180496	789624	1	82,	0,
#Deleted in new
chr15	25181842	25222285	chr15:25181842-25222285	0	+	25181842	25181842	8553170	34	53,87,132,43,135,132,48,131,44,132,44,111,46,277,45,44,132,45,130,46,131,44,131,45,131,45,132,46,132,45,130,125,45,127,	0,176,354,869,2098,3600,4117,5506,6019,7380,7898,9397,9874,11290,11804,13404,15539,16066,17419,17935,19293,19809,21197,21709,22327,22841,29764,30281,31616,32131,35370,36597,37085,40316,
#Deleted in new
chr15	25182384	25182466	chr15:25182384-25182466	3	+	25182384	25182384	789624	1	82,	0,
#Deleted in new
chr15	25184305	25184387	chr15:25184305-25184387	3	+	25184305	25184305	789624	1	82,	0,
#Deleted in new
chr15	25185630	25185712	chr15:25185630-25185712	3	+	25185630	25185630	789624	1	82,	0,
#Deleted in new
chr15	25187535	25187616	chr15:25187535-25187616	3	+	25187535	25187535	789624	1	81,	0,
#Deleted in new
chr15	25189302	25193489	chr15:25189302-25193489	1	+	25189302	25189302	8553170	5	52,44,111,46,357,	0,438,1937,2414,3830,
#Deleted in new
chr15	25189413	25189495	chr15:25189413-25189495	3	+	25189413	25189413	789624	1	82,	0,
#Deleted in new
chr15	25191415	25191497	chr15:25191415-25191497	3	+	25191415	25191415	789624	1	82,	0,
#Deleted in new
chr15	25193312	25197502	chr15:25193312-25197502	1	+	25193312	25193312	8553170	3	379,44,121,	0,1934,4069,
#Deleted in new
chr15	25193320	25193402	chr15:25193320-25193402	3	+	25193320	25193320	789624	1	82,	0,
#Deleted in new
chr15	25194920	25195001	chr15:25194920-25195001	3	+	25194920	25194920	789624	1	81,	0,
#Deleted in new
chr15	25197427	25214018	chr15:25197427-25214018	0	+	25197427	25197427	8553170	16	86,45,130,46,131,44,131,749,45,158,45,132,132,46,132,45,	0,481,1834,2350,3708,4224,5612,6124,7256,8615,9157,10468,14179,14696,16031,16546,
#Deleted in new
chr15	25197575	25197656	chr15:25197575-25197656	3	+	25197575	25197575	789624	1	81,	0,
#Deleted in new
chr15	25199447	25199529	chr15:25199447-25199529	3	+	25199447	25199447	789624	1	82,	0,
#Deleted in new
chr15	25201322	25201404	chr15:25201322-25201404	3	+	25201322	25201322	789624	1	82,	0,
#Deleted in new
chr15	25203226	25203308	chr15:25203226-25203308	3	+	25203226	25203226	789624	1	82,	0,
#Deleted in new
chr15	25204356	25204438	chr15:25204356-25204438	3	+	25204356	25204356	789624	1	82,	0,
#Deleted in new
chr15	25206079	25213529	chr15:25206079-25213529	1	+	25206079	25206079	8553170	7	121,45,132,130,132,46,71,	0,505,1816,3652,5527,6044,7379,
#Deleted in new
chr15	25206261	25206343	chr15:25206261-25206343	3	+	25206261	25206261	789624	1	82,	0,
#Deleted in new
chr15	25208082	25208163	chr15:25208082-25208163	3	+	25208082	25208082	789624	1	81,	0,
#Deleted in new
chr15	25209917	25209999	chr15:25209917-25209999	3	+	25209917	25209917	789624	1	82,	0,
#Deleted in new
chr15	25211795	25211877	chr15:25211795-25211877	3	+	25211795	25211795	789624	1	82,	0,
#Deleted in new
chr15	25213647	25213729	chr15:25213647-25213729	3	+	25213647	25213647	789624	1	82,	0,
#Deleted in new
chr15	25215540	25215622	chr15:25215540-25215622	3	+	25215540	25215540	789624	1	82,	0,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr15	25218351	25375476	chr15:25218351-25375476	3	+	25218351	25218351	8553170	39	621,132,132,44,132,45,132,132,41,112,45,132,45,146,43,45,45,132,45,131,45,137,72,133,45,133,45,137,131,44,109,184,133,125,129,117,43,38,1955,	0,3807,4707,5223,6663,7177,8566,10428,10942,12318,12814,13848,14359,15706,16223,18057,21816,23207,23720,25075,25588,25783,26786,26937,27454,28805,29320,29515,32329,32824,33873,48079,48560,49977,51253,53066,59015,60495,155170,
#Deleted in new
chr15	25218616	25218698	chr15:25218616-25218698	3	+	25218616	25218616	789624	1	82,	0,
#Deleted in new
chr15	25220496	25220578	chr15:25220496-25220578	3	+	25220496	25220496	789624	1	82,	0,
#Deleted in new
chr15	25222347	25222428	chr15:25222347-25222428	3	+	25222347	25222347	789624	1	81,	0,
#Deleted in new
chr15	25223245	25223327	chr15:25223245-25223327	3	+	25223245	25223245	789624	1	82,	0,
#Deleted in new
chr15	25225202	25225284	chr15:25225202-25225284	3	+	25225202	25225202	789624	1	82,	0,
#Deleted in new
chr15	25227108	25227190	chr15:25227108-25227190	3	+	25227108	25227108	789624	1	82,	0,
#Deleted in new
chr15	25228966	25229048	chr15:25228966-25229048	3	+	25228966	25228966	789624	1	82,	0,
#Deleted in new
chr15	25230837	25230919	chr15:25230837-25230919	3	+	25230837	25230837	789624	1	82,	0,
#Deleted in new
chr15	25232386	25232468	chr15:25232386-25232468	3	+	25232386	25232386	789624	1	82,	0,
#Deleted in new
chr15	25234246	25234328	chr15:25234246-25234328	3	+	25234246	25234246	789624	1	82,	0,
#Deleted in new
chr15	25236084	25236166	chr15:25236084-25236166	3	+	25236084	25236084	789624	1	82,	0,
#Deleted in new
chr15	25237985	25238067	chr15:25237985-25238067	3	+	25237985	25237985	789624	1	82,	0,
#Deleted in new
chr15	25239837	25239919	chr15:25239837-25239919	3	+	25239837	25239837	789624	1	82,	0,
#Deleted in new
chr15	25241745	25241827	chr15:25241745-25241827	3	+	25241745	25241745	789624	1	82,	0,
#Deleted in new
chr15	25243613	25243695	chr15:25243613-25243695	3	+	25243613	25243613	789624	1	82,	0,
#Deleted in new
chr15	25245477	25245559	chr15:25245477-25245559	3	+	25245477	25245477	789624	1	82,	0,
#Deleted in new
chr15	25247344	25247426	chr15:25247344-25247426	3	+	25247344	25247344	789624	1	82,	0,
#Deleted in new
chr15	25249197	25249279	chr15:25249197-25249279	3	+	25249197	25249197	789624	1	82,	0,
#Deleted in new
chr15	25250858	25250940	chr15:25250858-25250940	3	+	25250858	25250858	789624	1	82,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	25252224	25338196	chr15:25252224-25338196	1	+	25252224	25252224	8553170	9	109,184,133,125,129,117,43,38,186,	0,14206,14687,16104,17380,19193,25142,26622,85786,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	25255578	25257027	chr15:25255578-25257027	3	+	25255578	25255578	8553170	1	1449,	0,
#Deleted in new
chr15	25264509	25264590	chr15:25264509-25264590	3	+	25264509	25264509	789624	1	81,	0,
#Deleted in new
chr15	25266590	25266661	chr15:25266590-25266661	3	+	25266590	25266590	789624	1	71,	0,
#Deleted in new
chr15	25268465	25268551	chr15:25268465-25268551	3	+	25268465	25268465	8553170	1	86,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	25269686	25419462	chr15:25269686-25419462	1	+	25269686	25269686	8553170	6	47,117,43,38,196,675,	0,1731,7680,9160,121909,149101,
#Deleted in new
chr15	25269782	25269858	chr15:25269782-25269858	3	+	25269782	25269782	789624	1	76,	0,
#Deleted in new
chr15	25278342	25278409	chr15:25278342-25278409	3	+	25278342	25278342	789624	1	67,	0,
#Partially deleted in new
chr15	25333727	25439008	chr15:25333727-25439008	3	-	25339136	25405462	0	15	5530,144,74,156,165,206,145,1247,299,42,162,65,120,64,520,	0,6357,20625,20800,22164,22963,26655,36838,41737,71733,73339,74892,75360,78180,104761,
#Partially deleted in new
chr15	25333727	25439028	chr15:25333727-25439028	1	-	25339136	25409107	0	13	5530,144,74,156,165,206,145,1247,299,42,120,64,540,	0,6357,20625,20800,22164,22963,26655,36838,41737,71733,75360,78180,104761,
#Partially deleted in new
chr15	25333727	25439005	chr15:25333727-25439005	1	-	25340080	25405462	789624	10	6501,74,156,165,206,145,1247,299,42,517,	0,20625,20800,22164,22963,26655,36838,41737,71733,104761,
#Partially deleted in new
chr15	25333727	25346031	chr15:25333727-25346031	1	-	25339136	25340119	789624	3	5530,144,52,	0,6357,12252,
#Partially deleted in new
chr15	25333727	25438925	chr15:25333727-25438925	1	-	25339136	25393747	0	14	5530,144,74,156,165,206,145,1247,299,113,42,120,64,437,	0,6357,20625,20800,22164,22963,26655,36838,41737,60018,71733,75360,78180,104761,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr15	25333727	25438986	chr15:25333727-25438986	1	-	25339136	25405462	0	17	5530,144,74,156,165,206,145,1247,299,42,146,65,120,64,133,97,498,	0,6357,20625,20800,22164,22963,26655,36838,41737,71733,73339,74892,75360,78180,81982,86928,104761,
#Partially deleted in new
chr15	25337246	25438694	chr15:25337246-25438694	1	-	25339136	25405462	0	14	2011,144,74,156,165,206,145,1247,299,42,196,120,64,206,	0,2838,17106,17281,18645,19444,23136,33319,38218,68214,69820,71841,74661,101242,
#Partially deleted in new
chr15	25337246	25439024	chr15:25337246-25439024	1	-	25339136	25409107	8553170	13	2011,144,74,156,165,206,145,1247,299,42,120,64,536,	0,2838,17106,17281,18645,19444,23136,33319,38218,68214,71841,74661,101242,
#Partially deleted in new
chr15	25337246	25439024	chr15:25337246-25439024	1	-	25339136	25405462	789624	11	2011,144,74,156,165,206,145,1247,299,42,536,	0,2838,17106,17281,18645,19444,23136,33319,38218,68214,101242,
#Partially deleted in new
chr15	25337246	25439024	chr15:25337246-25439024	1	-	25339136	25408648	789624	14	2011,144,74,156,165,206,145,1247,299,42,65,120,64,536,	0,2838,17106,17281,18645,19444,23136,33319,38218,68214,71373,71841,74661,101242,
#Partially deleted in new
chr15	25337252	25439056	chr15:25337252-25439056	1	-	25339136	25405462	0	11	2005,144,74,156,165,206,145,1247,299,42,568,	0,2832,17100,17275,18639,19438,23130,33313,38212,68208,101236,
#Partially deleted in new
chr15	25339105	25438524	chr15:25339105-25438524	1	-	25339136	25405462	0	15	152,144,74,156,165,206,145,1247,299,42,71,65,120,64,36,	0,979,15247,15422,16786,17585,21277,31460,36359,66355,67961,69514,69982,72802,99383,
#Partially deleted in new
chr15	25339105	25438541	chr15:25339105-25438541	1	-	25339136	25405462	0	15	152,144,74,156,165,206,145,1247,299,42,196,113,120,64,53,	0,979,15247,15422,16786,17585,21277,31460,36359,66355,67961,69466,69982,72802,99383,
#Partially deleted in new
chr15	25339121	25355982	chr15:25339121-25355982	0	-	25339136	25355982	789624	4	136,144,74,91,	0,963,15231,16770,
#Partially deleted in new
chr15	25339135	25356765	chr15:25339135-25356765	0	-	25339136	25356765	789624	5	122,144,74,156,75,	0,949,15217,15392,17555,
#Partially deleted in new
chr15	25339136	25438513	chr15:25339136-25438513	1	-	25339136	25408648	0	14	121,144,74,156,165,206,145,1247,299,42,65,120,64,25,	0,948,15216,15391,16755,17554,21246,31429,36328,66324,69483,69951,72771,99352,
#Deleted in new
chr15	25345632	25347235	chr15:25345632-25347235	3	-	25345632	25345632	8553170	1	1603,	0,
#Partially deleted in new
chr15	25354032	25439051	chr15:25354032-25439051	1	-	25354348	25405462	789624	9	394,156,165,206,145,1247,299,42,563,	0,495,1859,2658,6350,16533,21432,51428,84456,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	25354406	25357575	chr15:25354406-25357575	0	-	25354406	25354406	8553170	5	20,156,165,206,242,	0,121,1485,2284,2927,
#Partially deleted in new
chr15	25371482	25405603	chr15:25371482-25405603	0	-	25371482	25371482	8553170	3	330,299,143,	0,3982,33978,
#Partially deleted in new
chr15	25371491	25438571	chr15:25371491-25438571	0	-	25371491	25371491	8553170	6	321,103,42,120,64,83,	0,3973,33969,37596,40416,66997,
#Partially deleted in new
chr15	25371612	25438526	chr15:25371612-25438526	0	-	25371612	25409107	789624	6	200,299,42,120,25,20,	0,3852,33848,37475,40295,66894,
#Partially deleted in new
chr15	25371728	25438332	chr15:25371728-25438332	0	-	25371728	25409107	789624	6	84,299,42,120,64,280,	0,3736,33732,37359,40179,66324,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	25375579	25408713	chr15:25375579-25408713	0	-	25375579	25375579	8553170	3	184,42,1647,	0,29881,31487,
#Partially deleted in new
chr15	25375592	25438329	chr15:25375592-25438329	0	-	25375592	25409107	789624	5	171,42,120,64,39,	0,29868,33495,36315,62698,
#Partially deleted in new
chr15	25375616	25439014	chr15:25375616-25439014	0	-	25375616	25405462	789624	4	147,42,64,526,	0,29844,36291,62872,
#Partially deleted in new
chr15	25375618	25438968	chr15:25375618-25438968	0	-	25375618	25405462	789624	7	145,42,196,65,120,64,480,	0,29842,31448,33001,33469,36289,62870,
#Partially deleted in new
chr15	25375706	25409412	chr15:25375706-25409412	0	-	25375706	25409107	789624	3	57,42,325,	0,29754,33381,
#Partially deleted in new
chr15	25405479	25438999	chr15:25405479-25438999	0	-	25405479	25409107	789624	3	23,120,511,	0,3608,33009,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	25405498	25420733	chr15:25405498-25420733	0	-	25405498	25409107	789624	5	4,120,64,128,78,	0,3589,6409,10216,15157,
#Partially deleted in new
chr15	25411907	25438329	chr15:25411907-25438329	0	-	25411907	25411907	8553170	3	64,133,277,	0,3802,26145,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	25417933	25419445	chr15:25417933-25419445	0	+	25417933	25417933	8553170	1	1512,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	25484830	25578791	chr15:25484830-25578791	3	-	25484830	25484830	8553170	4	2008,168,148,167,	0,16254,23228,93794,
#Deleted in new
chr15	25580968	25581122	chr15:25580968-25581122	7	+	25580968	25580968	16724991	1	154,	0,
#Partially deleted in new
chr15	25677272	25863208	chr15:25677272-25863208	3	-	25679340	25863096	789624	21	2702,188,105,81,201,126,77,328,185,127,104,568,195,218,253,131,132,107,86,205,561,	0,2848,3537,3721,6013,10430,14442,17546,24643,30703,30924,36401,39457,40909,44384,46618,48678,49887,58783,103746,185375,
#Partially deleted in new
chr15	25677272	25863723	chr15:25677272-25863723	0	-	25714231	25863096	789624	22	2702,188,105,81,201,126,77,328,185,127,104,563,199,218,253,131,132,107,86,205,555,93,	0,2848,3537,3721,6013,10430,14442,17546,24643,30703,30924,36401,39453,40909,44384,46618,48678,49887,58783,103746,185375,186358,
#Partially deleted in new
chr15	25680993	25684035	chr15:25680993-25684035	0	-	25680993	25680993	8553170	2	81,750,	0,2292,
#Partially deleted in new
chr15	25683446	25694825	chr15:25683446-25694825	0	-	25683446	25694825	789624	4	40,294,77,7,	0,4256,8268,11372,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	25708469	25710869	chr15:25708469-25710869	3	-	25708469	25708469	8553170	1	2400,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	25738507	25738620	chr15:25738507-25738620	7	+	25738507	25738507	16724991	1	113,	0,
#Partially deleted in new
chr15	25841481	25865170	chr15:25841481-25865170	0	-	25862317	25863096	789624	6	99,102,76,198,555,156,	0,180,20300,20657,21166,23533,
#Partially deleted in new
chr15	25841488	25862184	chr15:25841488-25862184	0	-	25841488	25841488	8553170	3	92,102,403,	0,173,20293,
#Deleted in new
chr15	25848746	25848825	chr15:25848746-25848825	3	-	25848746	25848746	5263520	1	79,	0,
#Deleted in new
chr15	25861780	25865172	chr15:25861780-25865172	1	-	25862317	25863096	789624	4	77,198,555,158,	0,358,867,3234,
#Partially deleted in new
chr15	25865294	25877211	chr15:25865294-25877211	3	+	25865294	25865294	8553170	2	225,504,	0,11413,
#Partially deleted in new
chr15	25902432	25932752	chr15:25902432-25932752	0	+	25902432	25902432	8553170	2	130,388,	0,29932,
#Partially deleted in new
chr15	25928145	25928575	chr15:25928145-25928575	7	-	25928145	25928145	16724991	1	430,	0,
#Deleted in new
chr15	26008939	26009074	chr15:26008939-26009074	3	-	26008939	26008939	8553170	1	135,	0,
#Deleted in new
chr15	26050537	26052276	chr15:26050537-26052276	3	-	26050537	26050537	8553170	2	257,620,	0,1119,
#Partially deleted in new
chr15	26115812	26133026	chr15:26115812-26133026	3	+	26115812	26115812	789624	6	210,105,105,80,70,143,	0,367,9396,15857,16478,17071,
#Partially deleted in new
chr15	26115824	26126371	chr15:26115824-26126371	1	+	26115824	26115824	789624	4	198,105,105,761,	0,355,9384,9786,
#Deleted in new
chr15	26115910	26116672	chr15:26115910-26116672	0	+	26115910	26115910	8553170	2	112,493,	0,269,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	26118707	26133037	chr15:26118707-26133037	1	+	26118707	26118707	8553170	5	121,105,80,54,154,	0,6501,12962,13599,14176,
#Deleted in new
chr15	26131671	26133025	chr15:26131671-26133025	0	+	26131671	26131671	8553170	2	78,142,	0,1212,
#Partially deleted in new
chr15	26395071	26446774	chr15:26395071-26446774	3	+	26395071	26395071	8553170	3	173,87,346,	0,50485,51357,
#Partially deleted in new
chr15	26433373	26446601	chr15:26433373-26446601	1	+	26433373	26433373	8553170	2	343,173,	0,13055,
#Partially deleted in new
chr15	26543545	26773074	chr15:26543545-26773074	3	-	26547792	26772962	0	9	4589,245,153,138,83,221,68,92,192,	0,17386,24035,36773,39786,77768,228856,229135,229337,
#Partially deleted in new
chr15	26543545	26716765	chr15:26543545-26716765	1	-	26547792	26621519	0	7	4589,245,153,138,83,221,152,	0,17386,24035,36773,39786,77768,173068,
#Partially deleted in new
chr15	26543548	26773076	chr15:26543548-26773076	1	-	26547792	26621519	0	10	4586,245,153,138,83,221,96,68,92,194,	0,17383,24032,36770,39783,77765,98884,228853,229132,229334,
#Partially deleted in new
chr15	26543551	26939539	chr15:26543551-26939539	1	-	26547792	26939436	789624	10	4583,245,153,138,83,221,68,92,48,303,	0,17380,24029,36767,39780,77762,228850,229129,272815,395685,
#Partially deleted in new
chr15	26543664	26666671	chr15:26543664-26666671	0	-	26543664	26543664	8553170	7	4470,245,153,138,83,221,283,	0,17267,23916,36654,39667,77649,122724,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	26543843	26621457	chr15:26543843-26621457	0	-	26553490	26621457	789624	7	4291,138,245,153,138,83,144,	0,9539,17088,23737,36475,39488,77470,
#Partially deleted in new
chr15	26544784	26773788	chr15:26544784-26773788	1	-	26547792	26773724	0	9	3350,245,153,138,83,221,68,92,144,	0,16147,22796,35534,38547,76529,227617,227896,228860,
#Partially deleted in new
chr15	26544797	26772330	chr15:26544797-26772330	1	-	26547792	26621519	0	7	3337,245,153,138,83,221,332,	0,16134,22783,35521,38534,76516,227201,
#Partially deleted in new
chr15	26546443	26774003	chr15:26546443-26774003	1	-	26547792	26772753	789624	9	1691,245,153,138,83,221,68,92,61,	0,14488,21137,33875,36888,74870,225958,226237,227499,
#Partially deleted in new
chr15	26547188	26629090	chr15:26547188-26629090	1	-	26547792	26629003	0	7	946,245,153,138,83,221,114,	0,13743,20392,33130,36143,74125,81788,
#Partially deleted in new
chr15	26547253	26773014	chr15:26547253-26773014	0	-	26642504	26772962	789624	10	881,245,153,138,83,221,96,68,92,132,	0,13678,20327,33065,36078,74060,95179,225148,225427,225629,
#Partially deleted in new
chr15	26547632	26716765	chr15:26547632-26716765	0	-	26547632	26547632	8553170	7	502,245,153,138,83,221,152,	0,13299,19948,32686,35699,73681,168981,
#Partially deleted in new
chr15	26547792	26767236	chr15:26547792-26767236	1	-	26547792	26621519	0	7	342,245,153,138,83,221,85,	0,13139,19788,32526,35539,73521,219359,
#Partially deleted in new
chr15	26548058	26550114	chr15:26548058-26550114	0	-	26548058	26548058	8553170	2	76,44,	0,2012,
#Deleted in new
chr15	26557597	26557937	chr15:26557597-26557937	3	-	26557597	26557597	8553170	1	340,	0,
#Partially deleted in new
chr15	26561068	26773057	chr15:26561068-26773057	0	-	26583336	26772962	789624	7	108,153,138,83,68,92,175,	0,6512,19250,22263,211333,211612,211814,
#Partially deleted in new
chr15	26561122	26580671	chr15:26561122-26580671	0	-	26561122	26561122	8553170	3	54,153,353,	0,6458,19196,
#Partially deleted in new
chr15	26567664	26569342	chr15:26567664-26569342	0	-	26567664	26567664	8553170	2	69,31,	0,1647,
#Deleted in new
chr15	26581146	26583366	chr15:26581146-26583366	0	-	26581146	26581146	8553170	2	64,35,	0,2185,
#Partially deleted in new
chr15	26590213	26621358	chr15:26590213-26621358	0	-	26590213	26590213	8553170	2	55,45,	0,31100,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	26611857	26615717	chr15:26611857-26615717	0	-	26611857	26611857	8553170	1	3860,	0,
#Partially deleted in new
chr15	26615296	26629178	chr15:26615296-26629178	0	-	26615296	26615296	789624	7	125,287,221,424,221,103,202,	0,477,6017,8911,9468,10135,13680,
#Partially deleted in new
chr15	26615296	26621406	chr15:26615296-26621406	0	-	26616020	26621406	789624	3	125,283,93,	0,481,6017,
#Partially deleted in new
chr15	26657029	26658763	chr15:26657029-26658763	3	-	26657029	26657029	8553170	2	275,320,	0,1414,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	26749934	26790300	chr15:26749934-26790300	0	-	26749934	26749934	8553170	4	216,68,92,452,	0,22467,22746,39914,
#Deleted in new
chr15	26771818	26773751	chr15:26771818-26773751	0	-	26771818	26771818	8553170	4	139,68,92,107,	0,583,862,1826,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	26798386	26816406	chr15:26798386-26816406	0	-	26798386	26798386	8553170	2	60,40,	0,17980,
#Deleted in new
chr15	26851131	26851610	chr15:26851131-26851610	7	-	26851131	26851131	16724991	1	479,	0,
#Partially deleted in new
chr15	26866362	26949207	chr15:26866362-26949207	3	+	26869248	26948233	0	11	749,65,160,122,68,221,83,144,153,212,1274,	0,2366,2812,14483,16803,16974,48440,70822,73562,76852,81571,
#Partially deleted in new
chr15	26866910	26948752	chr15:26866910-26948752	1	+	26869248	26948233	0	10	201,160,122,68,221,83,144,153,212,819,	0,2264,13935,16255,16426,47892,70274,73014,76304,81023,
#Partially deleted in new
chr15	26867071	26937199	chr15:26867071-26937199	0	+	26880855	26937199	789624	6	40,122,68,221,83,15,	0,13774,16094,16265,47731,70113,
#Partially deleted in new
chr15	26867119	26877684	chr15:26867119-26877684	0	+	26867119	26867119	8553170	4	265,65,160,16,	0,1609,2055,10549,
#Partially deleted in new
chr15	26867125	26949207	chr15:26867125-26949207	1	+	26869248	26948233	0	11	259,65,160,122,68,221,83,144,153,212,1274,	0,1603,2049,13720,16040,16211,47677,70059,72799,76089,80808,
#Partially deleted in new
chr15	26867162	26883215	chr15:26867162-26883215	0	+	26869248	26883215	789624	5	256,65,160,122,50,	0,1566,2012,13683,16003,
#Partially deleted in new
chr15	26867241	26883506	chr15:26867241-26883506	0	+	26869248	26883506	789624	6	143,65,160,122,68,170,	0,1487,1933,13604,15924,16095,
#Partially deleted in new
chr15	26867244	26914850	chr15:26867244-26914850	0	+	26867244	26867244	8553170	5	174,65,160,122,48,	0,1484,1930,13601,47558,
#Deleted in new
chr15	26867828	26869296	chr15:26867828-26869296	0	+	26869248	26869296	789624	3	271,65,122,	0,900,1346,
#Partially deleted in new
chr15	26868714	26883557	chr15:26868714-26883557	0	+	26869248	26883557	789624	5	79,160,122,68,221,	0,460,12131,14451,14622,
#Partially deleted in new
chr15	26880542	26883413	chr15:26880542-26883413	0	+	26880855	26883413	789624	3	425,68,77,	0,2623,2794,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	26964916	26970385	chr15:26964916-26970385	7	+	26964916	26964916	16724991	2	450,167,	0,5302,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	26971281	27541991	chr15:26971281-27541991	3	+	26971535	27532881	789624	10	307,149,68,221,83,138,153,197,60,9392,	0,5720,55472,355527,357524,509368,548690,556151,556651,561318,
#Partially deleted in new
chr15	26971392	27481337	chr15:26971392-27481337	1	+	26971535	27480837	789624	6	196,149,68,221,83,688,	0,5609,55361,355416,357413,509257,
#Partially deleted in new
chr15	26971443	27027074	chr15:26971443-27027074	0	+	26971443	26971443	8553170	3	145,149,321,	0,5558,55310,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	27157614	27161319	chr15:27157614-27161319	3	-	27157614	27157614	789624	3	541,131,298,	0,651,3407,
#Deleted in new
chr15	27208088	27208635	chr15:27208088-27208635	7	-	27208088	27208088	16724991	1	547,	0,
#Partially deleted in new
chr15	27271540	27295197	chr15:27271540-27295197	0	+	27271540	27271540	8553170	2	97,349,	0,23308,
#Partially deleted in new
chr15	27271541	27527515	chr15:27271541-27527515	0	+	27271541	27527515	789624	6	96,221,83,138,153,83,	0,55267,57264,209108,248430,255891,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	27280317	27280436	chr15:27280317-27280436	7	-	27280317	27280317	16724991	1	119,	0,
#Partially deleted in new
chr15	27326807	27532981	chr15:27326807-27532981	1	+	27328851	27532881	789624	7	222,83,138,153,197,60,382,	0,1998,153842,193164,200625,201125,205792,
#Partially deleted in new
chr15	27328816	27350396	chr15:27328816-27350396	0	+	27328816	27350170	789624	2	72,270,	0,21310,
#Deleted in new
chr15	27340523	27340804	chr15:27340523-27340804	7	+	27340523	27340523	16724991	1	281,	0,
#Partially deleted in new
chr15	27362309	27366398	chr15:27362309-27366398	3	+	27362309	27362309	8553170	1	4089,	0,
#Partially deleted in new
chr15	27418795	27420735	chr15:27418795-27420735	3	-	27418795	27418795	8553170	2	326,54,	0,1886,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	27422380	27428338	chr15:27422380-27428338	3	+	27422380	27422380	8553170	2	53,265,	0,5693,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	27483034	27541197	chr15:27483034-27541197	0	-	27483034	27483034	8553170	2	262,85,	0,58078,
#Partially deleted in new
chr15	27519971	27530920	chr15:27519971-27530920	0	+	27519971	27530712	789624	4	153,197,60,307,	0,7461,7961,10642,
#Partially deleted in new
chr15	27536899	27541991	chr15:27536899-27541991	3	-	27536899	27536899	8553170	2	221,879,	0,4213,
#Partially deleted in new
chr15	27621533	27629289	chr15:27621533-27629289	3	+	27621533	27621533	8553170	3	144,74,118,	0,858,7638,
#Partially deleted in new
chr15	27684497	27685768	chr15:27684497-27685768	3	-	27684497	27684497	8553170	2	73,136,	0,1135,
#Partially deleted in new
chr15	27754874	28099312	chr15:27754874-28099312	1	-	27755387	28081874	789624	23	598,94,94,105,60,128,109,58,148,133,139,125,57,66,154,83,161,73,58,189,99,248,89,	0,90084,96507,116279,116988,171252,196909,200283,202713,211815,228470,230189,231712,234726,259901,261229,263522,267626,269970,272996,277190,326773,344349,
#Partially deleted in new
chr15	27754874	28099358	chr15:27754874-28099358	3	-	27755387	28081874	789624	24	598,94,94,105,60,128,109,58,148,133,139,125,57,66,72,154,83,161,73,58,189,99,248,135,	0,90084,96507,116279,116988,171252,196909,200283,202713,211815,228470,230189,231712,234726,235701,259901,261229,263522,267626,269970,272996,277190,326773,344349,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	27775620	27776798	chr15:27775620-27776798	3	+	27775620	27775620	8553170	2	76,342,	0,836,
#Partially deleted in new
chr15	27895703	27896582	chr15:27895703-27896582	7	+	27895703	27895703	16724991	1	879,	0,
#Partially deleted in new
chr15	28016103	28099296	chr15:28016103-28099296	0	-	28016103	28081874	789624	6	83,58,189,99,248,73,	0,8741,11767,15961,65544,83120,
#Partially deleted in new
chr15	28018411	28099293	chr15:28018411-28099293	0	-	28018411	28081874	789624	7	146,73,58,189,99,248,183,	0,4089,6433,9459,13653,63236,80699,
#Partially deleted in new
chr15	28111039	28322152	chr15:28111039-28322152	3	-	28111762	28321433	0	93	996,213,106,191,113,195,142,84,198,188,140,92,162,178,215,199,116,156,126,119,159,132,108,154,192,141,184,172,226,145,172,82,178,91,144,82,112,176,92,106,191,140,109,126,169,99,137,268,143,144,139,231,197,148,182,183,193,188,192,152,137,174,134,196,128,133,215,151,104,171,186,156,185,179,125,229,201,194,252,114,158,152,189,174,172,111,157,101,220,135,115,103,78,	0,2031,2533,3572,4389,5625,5973,10306,12997,13966,19123,19463,21060,21613,24438,30392,30691,31198,31787,32833,33037,33633,35197,41637,52054,56647,57367,58444,63355,64472,65388,65647,65910,66379,67847,68102,71361,75537,79925,80099,80921,85175,85421,87338,87561,90416,91073,91307,95200,99962,101405,102702,103036,103615,104581,107449,109412,110988,117178,118155,118420,118634,119327,122106,122394,122624,123030,125923,127074,127562,134841,135702,137512,143300,144832,145049,146021,149737,151878,154578,154777,157425,158208,159655,161175,161854,163251,163865,169028,181848,188362,210322,211035,
#Partially deleted in new
chr15	28111078	28192122	chr15:28111078-28192122	0	-	28125109	28192122	8553170	39	957,213,106,191,113,195,142,84,198,188,162,178,215,199,116,156,126,119,159,132,108,154,192,141,184,172,226,145,172,82,178,91,144,82,112,176,92,106,162,	0,1992,2494,3533,4350,5586,5934,10267,12958,13927,21021,21574,24399,30353,30652,31159,31748,32794,32998,33594,35158,41598,52015,56608,57328,58405,63316,64433,65349,65608,65871,66340,67808,68063,71322,75498,79886,80060,80882,
#Partially deleted in new
chr15	28111278	28117551	chr15:28111278-28117551	0	-	28111278	28111278	8553170	7	757,213,106,191,113,195,539,	0,1792,2294,3333,4150,5386,5734,
#Deleted in new
chr15	28111761	28113717	chr15:28111761-28113717	0	-	28111761	28111761	8553170	3	274,213,145,	0,1309,1811,
#Partially deleted in new
chr15	28115280	28118421	chr15:28115280-28118421	0	-	28115280	28115280	8553170	2	261,1757,	0,1384,
#Partially deleted in new
chr15	28130299	28135556	chr15:28130299-28135556	0	-	28130299	28130299	8553170	4	3,92,298,79,	0,203,1800,5178,
#Deleted in new
chr15	28141738	28142452	chr15:28141738-28142452	0	-	28141738	28141738	8553170	2	108,215,	0,499,
#Partially deleted in new
chr15	28152758	28174423	chr15:28152758-28174423	0	-	28152758	28174423	789624	5	72,141,184,172,29,	0,14928,15648,16725,21636,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	28190200	28203936	chr15:28190200-28203936	0	-	28190200	28190200	8553170	10	856,106,191,140,109,126,169,99,137,1590,	0,938,1760,6014,6260,8177,8400,11255,11912,12146,
#Partially deleted in new
chr15	28222147	28229516	chr15:28222147-28229516	0	-	28222147	28222147	8553170	3	68,192,322,	0,6070,7047,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr15	28254487	28322149	chr15:28254487-28322149	0	-	28298573	28321433	789624	21	31,125,229,201,194,252,114,158,152,189,174,172,111,157,101,220,135,113,115,103,75,	0,1384,1601,2573,6289,8430,11130,11329,13977,14760,16207,17727,18406,19803,20417,25580,38400,44029,44914,66874,67587,
#Partially deleted in new
chr15	28272043	28273168	chr15:28272043-28273168	0	-	28272043	28272043	8553170	2	343,275,	0,850,
#Partially deleted in new
chr15	28280033	28299483	chr15:28280033-28299483	0	-	28280033	28280033	8553170	3	254,135,82,	0,12854,19368,
#Deleted in new
chr15	28315650	28316059	chr15:28315650-28316059	7	+	28315650	28315650	16724991	1	409,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	28320121	28322119	chr15:28320121-28322119	0	-	28320121	28320121	8553170	3	343,103,45,	0,1240,1953,
#Partially deleted in new
chr15	28332236	28336609	chr15:28332236-28336609	7	+	28332236	28332236	16724991	4	194,227,125,170,	0,2380,2699,4203,
#Deleted in new
chr15	28346489	28346647	chr15:28346489-28346647	7	+	28346489	28346489	16724991	1	158,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	28349050	28358014	chr15:28349050-28358014	5	-	28349050	28349050	16724991	9	544,1761,142,59,107,94,51,129,147,	0,1200,3613,4085,5521,5723,5905,7042,8817,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	28349050	28358080	chr15:28349050-28358080	7	-	28349050	28349050	16724991	9	544,1761,142,59,107,94,51,129,213,	0,1200,3613,4085,5521,5723,5905,7042,8817,
#Partially deleted in new
chr15	28362795	28365731	chr15:28362795-28365731	7	-	28362795	28362795	16724991	3	145,383,92,	0,801,2844,
#Deleted in new
chr15	28378620	28382542	chr15:28378620-28382542	0	+	28378620	28378620	8553170	5	60,120,60,81,153,	0,1886,2591,2834,3769,
#Deleted in new
chr15	28378643	28383063	chr15:28378643-28383063	0	+	28378643	28378643	8553170	7	166,120,60,81,360,85,46,	0,1863,2568,2811,3746,4194,4374,
#Partially deleted in new
chr15	28378663	28392018	chr15:28378663-28392018	1	+	28384173	28389063	789624	18	146,120,60,81,360,85,110,90,108,88,257,69,76,92,101,101,153,3140,	0,1843,2548,2791,3726,4174,4354,5483,5679,5982,6461,6985,8425,8938,9604,9787,9977,10215,
#Partially deleted in new
chr15	28378663	28391224	chr15:28378663-28391224	3	+	28378761	28389063	789624	19	146,120,60,81,39,48,85,110,90,108,88,257,69,76,92,101,101,153,2346,	0,1843,2548,2791,3726,4038,4174,4354,5483,5679,5982,6461,6985,8425,8938,9604,9787,9977,10215,
#Deleted in new
chr15	28378663	28381453	chr15:28378663-28381453	0	+	28378663	28378663	8553170	3	146,120,242,	0,1843,2548,
#Deleted in new
chr15	28379403	28382506	chr15:28379403-28382506	0	+	28379403	28379403	8553170	5	201,120,60,81,117,	0,1103,1808,2051,2986,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	28387195	28387485	chr15:28387195-28387485	3	+	28387195	28387195	8553170	1	290,	0,
#Deleted in new
chr15	28402867	28405033	chr15:28402867-28405033	7	+	28402867	28402867	16724991	1	2166,	0,
#Deleted in new
chr15	28416448	28416674	chr15:28416448-28416674	7	+	28416448	28416448	16724991	1	226,	0,
#Deleted in new
chr15	28422171	28422373	chr15:28422171-28422373	7	+	28422171	28422171	16724991	1	202,	0,
#Deleted in new
chr15	28426490	28426584	chr15:28426490-28426584	3	+	28426490	28426490	5263520	1	94,	0,
#Deleted in new
chr15	28444143	28444264	chr15:28444143-28444264	7	+	28444143	28444143	16724991	1	121,	0,
#Partially deleted in new
chr15	28454659	28457783	chr15:28454659-28457783	7	-	28454659	28454659	16724991	3	409,179,172,	0,520,2952,
#Deleted in new
chr15	28473321	28473448	chr15:28473321-28473448	7	-	28473321	28473321	16724991	1	127,	0,
#Deleted in new
chr15	28490751	28490845	chr15:28490751-28490845	3	-	28490751	28490751	5263520	1	94,	0,
#Deleted in new
chr15	28494974	28495182	chr15:28494974-28495182	7	-	28494974	28494974	16724991	1	208,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	28506624	28508808	chr15:28506624-28508808	7	-	28506624	28506624	16724991	1	2184,	0,
#Partially deleted in new
chr15	28519610	28532971	chr15:28519610-28532971	0	-	28519610	28519610	789624	18	3147,153,101,101,92,76,81,257,88,108,90,110,85,360,81,60,120,146,	0,3232,3474,3657,4332,4861,6296,6644,7291,7574,7788,8897,9102,9275,10489,10753,11398,13215,
#Partially deleted in new
chr15	28519614	28532971	chr15:28519614-28532971	0	-	28519614	28519614	8553170	18	3143,153,101,101,92,76,69,257,88,108,90,110,85,360,81,60,120,146,	0,3228,3470,3653,4328,4857,6304,6640,7287,7570,7784,8893,9098,9271,10485,10749,11394,13211,
#Partially deleted in new
chr15	28519614	28532970	chr15:28519614-28532970	0	-	28519614	28519614	8553170	17	3143,153,101,101,92,76,69,257,88,108,90,110,85,1295,60,120,145,	0,3228,3470,3653,4328,4857,6304,6640,7287,7570,7784,8893,9098,9271,10749,11394,13211,
#Partially deleted in new
chr15	28520762	28530412	chr15:28520762-28530412	0	-	28520762	28520762	8553170	15	1995,153,101,101,76,69,257,88,108,90,110,85,360,81,49,	0,2080,2322,2505,3709,5156,5492,6139,6422,6636,7745,7950,8123,9337,9601,
#Partially deleted in new
chr15	28522572	28532971	chr15:28522572-28532971	3	-	28522572	28532909	789624	19	185,153,101,101,92,76,69,257,88,108,90,110,85,48,39,81,60,120,146,	0,270,512,695,1370,1899,3346,3682,4329,4612,4826,5935,6140,6313,6634,7527,7791,8436,10253,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	28524150	28524440	chr15:28524150-28524440	3	-	28524150	28524150	8553170	1	290,	0,
#Deleted in new
chr15	28529001	28533014	chr15:28529001-28533014	0	-	28529001	28529001	8553170	5	244,81,60,120,60,	0,1098,1362,2007,3953,
#Deleted in new
chr15	28529128	28532224	chr15:28529128-28532224	0	-	28529128	28529128	8553170	5	117,81,60,120,194,	0,971,1235,1880,2902,
#Deleted in new
chr15	28530181	28532971	chr15:28530181-28532971	0	-	28530181	28530181	8553170	3	242,120,146,	0,827,2644,
#Partially deleted in new
chr15	28545911	28549777	chr15:28545911-28549777	7	+	28545911	28545911	16724991	4	92,313,141,76,	0,1760,2792,3790,
#Partially deleted in new
chr15	28553637	28561379	chr15:28553637-28561379	7	+	28553637	28553637	16724991	8	129,129,51,94,107,59,142,1761,	0,1775,2989,3128,3317,4794,5183,5981,
#Deleted in new
chr15	28564985	28565152	chr15:28564985-28565152	7	-	28564985	28564985	16724991	1	167,	0,
#Partially deleted in new
chr15	28575018	28579400	chr15:28575018-28579400	7	-	28575018	28575018	16724991	4	170,125,227,203,	0,1549,1766,4179,
#Deleted in new
chr15	28589491	28591123	chr15:28589491-28591123	5	+	28589491	28589491	16724991	2	57,966,	0,666,
#Partially deleted in new
chr15	28590188	28674027	chr15:28590188-28674027	7	+	28590188	28590188	16724991	33	72,115,132,176,171,104,151,215,133,128,196,134,171,143,152,192,188,193,183,182,148,197,231,139,144,143,268,137,99,174,126,110,140,	0,21870,28335,39077,42448,43003,43401,46298,46786,47026,47246,50070,50733,50981,51241,52184,58691,60318,61216,64085,65084,65306,65607,66998,68434,73189,77007,77372,78068,81271,81542,83483,83699,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	28612141	28633274	chr15:28612141-28633274	4	+	28612141	28612141	16724991	6	32,160,132,176,171,83,	0,6077,6382,17124,20495,21050,
#Partially deleted in new
chr15	28633122	28641565	chr15:28633122-28641565	4	+	28633122	28633122	16724991	8	173,151,621,128,196,134,391,136,	0,467,3364,4092,4312,7136,7799,8307,
#Partially deleted in new
chr15	28633124	28642421	chr15:28633124-28642421	4	+	28633124	28633124	16724991	11	171,151,215,133,128,196,134,171,57,152,49,	0,465,3362,3850,4090,4310,7134,7797,8045,8305,9248,
#Partially deleted in new
chr15	28651420	28673915	chr15:28651420-28673915	4	+	28651420	28651420	16724991	13	167,182,419,231,139,144,143,268,137,99,174,126,28,	0,2853,3852,4375,5766,7202,11957,15775,16140,16836,20039,20310,22467,
#Partially deleted in new
chr15	28654441	28685264	chr15:28654441-28685264	5	+	28654441	28654441	16724991	14	14,148,231,139,144,143,268,137,99,174,126,140,48,1136,	0,831,1354,2745,4181,8936,12754,13119,13815,17018,17289,19446,27354,29687,
#Partially deleted in new
chr15	28671834	28682178	chr15:28671834-28682178	4	+	28671834	28671834	16724991	3	22,140,383,	0,2053,9961,
#Partially deleted in new
chr15	28679404	28682252	chr15:28679404-28682252	7	-	28679404	28679404	16724991	3	227,145,174,	0,1417,2674,
#Partially deleted in new
chr15	28701953	28712323	chr15:28701953-28712323	3	-	28701953	28712323	789624	19	176,156,98,101,92,76,69,257,88,108,87,110,85,48,39,81,60,120,48,	0,260,511,691,1365,1888,3205,3529,4162,4445,4659,5794,5999,6172,6421,7313,7575,8533,10322,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	28703553	28703790	chr15:28703553-28703790	3	-	28703553	28703553	8553170	1	237,	0,
#Partially deleted in new
chr15	28709266	28738384	chr15:28709266-28738384	0	-	28709266	28709266	8553170	6	81,60,120,156,96,51,	0,262,1220,9167,10473,29067,
#Partially deleted in new
chr15	28719376	28738431	chr15:28719376-28738431	3	-	28719376	28719376	8553170	2	459,98,	0,18957,
#Partially deleted in new
chr15	28737582	28754869	chr15:28737582-28754869	5	+	28737582	28737582	16724991	8	603,174,151,170,166,191,87,61,	0,3527,7166,8397,10127,13905,16886,17226,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	28738021	28748426	chr15:28738021-28748426	4	+	28738021	28738021	16724991	6	164,157,151,159,170,717,	0,3088,6727,7575,7958,9688,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	28741100	28759204	chr15:28741100-28759204	7	+	28741100	28741100	16724991	8	166,151,159,170,166,187,87,4396,	0,3648,4496,4879,6609,10387,13368,13708,
#Deleted in new
chr15	28763439	28764151	chr15:28763439-28764151	7	-	28763439	28763439	16724991	1	712,	0,
#Deleted in new
chr15	28788242	28789392	chr15:28788242-28789392	5	+	28788242	28788242	16724991	2	105,790,	0,360,
#Deleted in new
chr15	28788601	28792002	chr15:28788601-28792002	7	+	28788601	28788601	16724991	2	69,69,	0,3332,
#Deleted in new
chr15	28789198	28789486	chr15:28789198-28789486	7	+	28789198	28789198	16724991	1	288,	0,
#Deleted in new
chr15	28789663	28790304	chr15:28789663-28790304	5	+	28789663	28789663	16724991	2	318,180,	0,461,
#Partially deleted in new
chr15	28789826	28808298	chr15:28789826-28808298	4	+	28789826	28789826	16724991	7	155,43,69,123,178,112,51,	0,298,2107,11543,14901,17113,18421,
#Partially deleted in new
chr15	28801365	28818999	chr15:28801365-28818999	5	+	28801365	28801365	16724991	7	131,178,112,168,249,135,96,	0,3362,5574,6884,13981,15387,17538,
#Partially deleted in new
chr15	28815345	28833337	chr15:28815345-28833337	4	+	28815345	28815345	16724991	4	250,135,95,62,	0,1407,3558,17930,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	28830618	28831182	chr15:28830618-28831182	7	-	28830618	28830618	16724991	2	40,219,	0,345,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	28832320	28859007	chr15:28832320-28859007	7	+	28832320	28832320	16724991	5	140,103,135,98,2875,	0,955,6367,14418,23812,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	28832379	28838983	chr15:28832379-28838983	4	+	28832379	28832379	16724991	3	81,103,296,	0,896,6308,
#Partially deleted in new
chr15	28841832	28848675	chr15:28841832-28848675	3	-	28842234	28848549	789624	9	1608,142,59,107,94,51,30,129,177,	0,1901,2372,3696,3885,4067,4387,5231,6666,
#Partially deleted in new
chr15	28844960	28848675	chr15:28844960-28848675	0	-	28844960	28844960	5263520	6	675,94,51,30,129,177,	0,757,939,1259,2103,3538,
#Deleted in new
chr15	28857881	28858398	chr15:28857881-28858398	7	-	28857881	28857881	16724991	1	517,	0,
#Partially deleted in new
chr15	28884482	29117717	chr15:28884482-29117717	3	+	29053884	29117133	789624	15	131,79,54,991,81,37,146,36,87,186,180,213,120,141,656,	0,37157,111270,169362,190438,191572,208592,209795,214007,217116,220896,222124,223787,229393,232579,
#Partially deleted in new
chr15	28885973	29118315	chr15:28885973-29118315	1	+	29053884	29117133	789624	16	305,90,110,54,991,81,37,146,36,87,186,180,213,120,141,1254,	0,9546,35666,109779,167871,188947,190081,207101,208304,212516,215625,219405,220633,222296,227902,231088,
#Partially deleted in new
chr15	28886021	29117717	chr15:28886021-29117717	1	+	29053884	29117133	789624	15	257,90,110,54,991,81,37,146,87,186,180,213,120,141,656,	0,9498,35618,109731,167823,188899,190033,207053,212468,215577,219357,220585,222248,227854,231040,
#Partially deleted in new
chr15	28886159	29108620	chr15:28886159-29108620	0	+	28886159	28886159	8553170	12	119,110,54,991,81,37,146,87,186,180,213,351,	0,35480,109593,167685,188761,189895,206915,212330,215439,219219,220447,222110,
#Partially deleted in new
chr15	28886162	29053897	chr15:28886162-29053897	0	+	29053884	29053897	8553170	6	116,171,90,110,54,53,	0,7711,9357,35477,109590,167682,
#Partially deleted in new
chr15	28919366	29054094	chr15:28919366-29054094	0	+	29053884	29054094	789624	4	121,110,54,250,	0,2273,76386,134478,
#Partially deleted in new
chr15	28921636	29118311	chr15:28921636-29118311	1	+	29053884	29117133	789624	13	113,54,991,81,37,146,87,186,180,213,120,141,1250,	0,74116,132208,153284,154418,171438,176853,179962,183742,184970,186633,192239,195425,
#Partially deleted in new
chr15	28921636	29118311	chr15:28921636-29118311	1	+	29053884	29117133	789624	14	113,54,991,81,37,146,36,87,186,180,213,120,141,1250,	0,74116,132208,153284,154418,171438,172641,176853,179962,183742,184970,186633,192239,195425,
#Partially deleted in new
chr15	28961303	29054220	chr15:28961303-29054220	0	+	29053884	29054220	789624	3	281,54,376,	0,34449,92541,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	28970195	28977464	chr15:28970195-28977464	3	-	28970195	28970195	8553170	2	317,434,	0,6835,
#Partially deleted in new
chr15	28990418	29053966	chr15:28990418-29053966	0	+	29053884	29053966	789624	3	378,54,122,	0,5334,63426,
#Partially deleted in new
chr15	29044323	29054675	chr15:29044323-29054675	0	+	29053884	29054675	789624	2	105,831,	0,9521,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	29070657	29102759	chr15:29070657-29102759	0	+	29070657	29070657	8553170	6	442,81,37,146,87,1161,	0,4263,5397,22417,27832,30941,
#Partially deleted in new
chr15	29120253	29570723	chr15:29120253-29570723	3	-	29123338	29570723	789624	11	3402,75,225,76,136,161,108,135,111,57,219,	0,4433,6013,8535,16112,16780,31480,76176,132114,261521,450251,
#Partially deleted in new
chr15	29123314	29196687	chr15:29123314-29196687	0	-	29123314	29123314	8553170	8	341,75,225,76,136,161,108,258,	0,1372,2952,5474,13051,13719,28419,73115,
#Partially deleted in new
chr15	29196429	29452799	chr15:29196429-29452799	0	-	29196429	29252466	789624	4	135,111,57,230,	0,55938,185345,256140,
#Deleted in new
chr15	29233672	29235137	chr15:29233672-29235137	7	-	29233672	29233672	16724991	1	1465,	0,
#Deleted in new
chr15	29233867	29233979	chr15:29233867-29233979	3	+	29233867	29233867	8553170	1	112,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	29264991	29269829	chr15:29264991-29269829	3	-	29268790	29269705	0	1	4838,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	29373601	29376956	chr15:29373601-29376956	3	-	29373601	29373601	8553170	1	3355,	0,
#Partially deleted in new
chr15	29381770	29569985	chr15:29381770-29569985	0	-	29381770	29381770	8553170	2	61,483,	0,187732,
#Deleted in new
chr15	29609675	29611212	chr15:29609675-29611212	3	-	29609675	29609675	8553170	1	1537,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	29612569	29614274	chr15:29612569-29614274	7	+	29612569	29612569	16724991	2	255,977,	0,728,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	29674989	29679168	chr15:29674989-29679168	3	+	29674989	29674989	789624	2	537,1993,	0,2186,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr15	29699366	29822503	chr15:29699366-29822503	3	-	29701594	29822028	0	28	2323,84,218,478,170,228,98,873,240,351,101,211,83,96,185,220,109,151,106,140,148,169,104,277,103,125,57,502,	0,4855,6161,9192,11464,17244,18654,18899,20410,20991,27012,27414,28570,33066,33264,33727,34907,37897,41964,43275,61772,62234,62968,66899,72697,73866,101279,122635,
#Partially deleted in new
chr15	29700151	29821548	chr15:29700151-29821548	1	-	29701594	29820565	789624	28	1538,144,218,478,170,228,98,873,351,101,211,83,96,185,220,109,151,106,140,148,169,104,277,103,125,57,148,133,	0,4010,5376,8407,10679,16459,17869,18114,20206,26227,26629,27785,32281,32479,32942,34122,37112,41179,42490,60987,61449,62183,66114,71912,73081,100494,120375,121264,
#Partially deleted in new
chr15	29700154	29822028	chr15:29700154-29822028	1	-	29701594	29822028	789624	28	1535,144,218,478,170,228,98,873,240,351,101,211,83,96,185,220,109,151,106,140,148,169,104,277,103,125,57,27,	0,4007,5373,8404,10676,16456,17866,18111,19622,20203,26224,26626,27782,32278,32476,32939,34119,37109,41176,42487,60984,61446,62180,66111,71909,73078,100491,121847,
#Partially deleted in new
chr15	29700159	29822503	chr15:29700159-29822503	1	-	29701594	29800693	789624	27	1530,144,218,478,170,228,98,873,351,101,211,83,96,185,220,109,151,106,140,148,169,104,277,103,125,57,502,	0,4002,5368,8399,10671,16451,17861,18106,20198,26219,26621,27777,32273,32471,32934,34114,37104,41171,42482,60979,61441,62175,66106,71904,73073,100486,121842,
#Partially deleted in new
chr15	29701244	29708822	chr15:29701244-29708822	0	-	29701594	29708822	789624	4	445,105,218,264,	0,2956,4283,7314,
#Partially deleted in new
chr15	29701594	29822028	chr15:29701594-29822028	1	-	29701594	29822028	0	27	95,84,218,478,170,228,98,873,351,101,211,83,96,185,220,109,151,106,140,148,169,104,277,103,125,57,27,	0,2627,3933,6964,9236,15016,16426,16671,18763,24784,25186,26342,30838,31036,31499,32679,35669,39736,41047,59544,60006,60740,64671,70469,71638,99051,120407,
#Deleted in new
chr15	29718892	29720128	chr15:29718892-29720128	0	-	29718892	29718892	8553170	2	246,352,	0,884,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	29728185	29729531	chr15:29728185-29729531	3	-	29728185	29728185	8553170	1	1346,	0,
#Deleted in new
chr15	29730712	29730985	chr15:29730712-29730985	7	+	29730712	29730712	16724991	1	273,	0,
#Deleted in new
chr15	29732133	29732933	chr15:29732133-29732933	0	-	29732133	29732133	8553170	2	395,303,	0,497,
#Partially deleted in new
chr15	29741021	29743029	chr15:29741021-29743029	0	-	29741021	29741021	8553170	2	415,388,	0,1620,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	29758902	29822502	chr15:29758902-29822502	1	-	29760166	29822028	789624	9	1406,148,169,104,277,103,125,57,501,	0,2236,2698,3432,7363,13161,14330,41743,63099,
#Partially deleted in new
chr15	29766439	29968865	chr15:29766439-29968865	0	-	29766439	29968839	789624	6	103,103,125,57,133,199,	0,5624,6793,34206,189792,202227,
#Partially deleted in new
chr15	29800495	29956294	chr15:29800495-29956294	0	-	29800495	29800495	8553170	2	207,63,	0,155736,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	29822630	29824081	chr15:29822630-29824081	3	+	29822630	29822630	8553170	1	1451,	0,
#Partially deleted in new
chr15	30005204	30006430	chr15:30005204-30006430	7	+	30005204	30005204	16724991	2	606,148,	0,1078,
#Partially deleted in new
chr15	30005442	30045848	chr15:30005442-30045848	3	-	30005442	30005442	8553170	2	347,138,	0,40268,
#Deleted in new
chr15	30044454	30045296	chr15:30044454-30045296	7	+	30044454	30044454	16724991	2	99,574,	0,268,
#Deleted in new
chr15	30072619	30072958	chr15:30072619-30072958	5	-	30072619	30072619	16724991	1	339,	0,
#Partially deleted in new
chr15	30083052	30093499	chr15:30083052-30093499	3	+	30083052	30093499	789624	19	48,120,60,81,39,48,85,110,87,108,88,257,69,76,92,101,98,156,176,	0,1718,2730,2971,3905,4206,4342,4522,5687,5880,6183,6647,7159,8482,8989,9655,9838,10031,10271,
#Partially deleted in new
chr15	30083690	30088337	chr15:30083690-30088337	0	+	30083690	30083690	8553170	8	166,120,60,81,39,48,85,763,	0,1080,2092,2333,3267,3568,3704,3884,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	30091661	30091898	chr15:30091661-30091898	3	+	30091661	30091661	8553170	1	237,	0,
#Partially deleted in new
chr15	30098825	30102093	chr15:30098825-30102093	7	-	30098825	30098825	16724991	3	61,240,173,	0,2110,3095,
#Partially deleted in new
chr15	30103719	30131227	chr15:30103719-30131227	5	+	30103719	30103719	16724991	4	289,125,79,100,	0,6582,23965,27408,
#Partially deleted in new
chr15	30103721	30114028	chr15:30103721-30114028	4	+	30103721	30103721	16724991	3	287,125,121,	0,6580,10186,
#Partially deleted in new
chr15	30103722	30131210	chr15:30103722-30131210	4	+	30103722	30103722	16724991	4	286,125,79,69,	0,6579,23962,27419,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	30103731	30131757	chr15:30103731-30131757	7	+	30103731	30103731	16724991	5	277,125,47,79,630,	0,6570,13160,23953,27396,
#Partially deleted in new
chr15	30110301	30127785	chr15:30110301-30127785	5	+	30110301	30110301	16724991	5	74,44,174,47,101,	0,3626,5113,6590,17383,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	30112197	30112330	chr15:30112197-30112330	3	+	30112197	30112197	8553170	1	133,	0,
#Partially deleted in new
chr15	30135148	30145567	chr15:30135148-30145567	3	+	30135148	30145567	789624	19	48,120,60,81,39,48,85,110,87,108,88,257,69,76,92,98,98,156,176,	0,1717,2732,2973,3909,4210,4346,4526,5693,5886,6189,6653,7165,8457,8964,9630,9810,10003,10243,
#Partially deleted in new
chr15	30135786	30139553	chr15:30135786-30139553	0	+	30135786	30135786	8553170	7	166,120,60,81,39,48,59,	0,1079,2094,2335,3271,3572,3708,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	30143732	30143969	chr15:30143732-30143969	3	+	30143732	30143732	8553170	1	237,	0,
#Partially deleted in new
chr15	30150871	30153409	chr15:30150871-30153409	7	-	30150871	30150871	16724991	3	65,240,147,	0,1416,2391,
#Deleted in new
chr15	30153932	30154110	chr15:30153932-30154110	7	-	30153932	30153932	16724991	1	178,	0,
#Partially deleted in new
chr15	30170562	30179129	chr15:30170562-30179129	3	-	30170562	30170562	8553170	3	66,64,121,	0,146,8446,
#Deleted in new
chr15	30178875	30179943	chr15:30178875-30179943	1	-	30178875	30178875	8553170	1	1068,	0,
#Partially deleted in new
chr15	30195808	30217552	chr15:30195808-30217552	0	+	30195808	30195808	8553170	3	306,57,785,	0,3466,20959,
#Duplicated in new
chr15	30196035	30214540	chr15:30196035-30214540	3	+	30196035	30196035	5263520	3	79,57,4124,	0,3239,14381,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	30210407	30210806	chr15:30210407-30210806	0	+	30210407	30210407	8553170	1	399,	0,
#Deleted in new
chr15	30223016	30225564	chr15:30223016-30225564	7	+	30223016	30223016	16724991	1	2548,	0,
#Duplicated in new
chr15	30282532	30288389	chr15:30282532-30288389	7	+	30282532	30282532	16724991	10	430,202,79,220,43,223,88,178,367,268,	0,747,966,1413,1767,2229,3690,4368,4836,5589,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	30344306	30348236	chr15:30344306-30348236	3	-	30344306	30344306	8553170	1	3930,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	30355435	30355540	chr15:30355435-30355540	3	+	30355435	30355435	8553170	1	105,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	30357765	30393549	chr15:30357765-30393549	3	-	30362292	30383351	789624	10	5046,110,87,195,168,80,47,64,125,298,	0,9652,13332,14381,15212,19264,22587,25553,29097,35486,
#Partially deleted in new
chr15	30361239	30393661	chr15:30361239-30393661	1	-	30362292	30373032	789624	9	1572,110,87,195,168,80,47,125,410,	0,6178,9858,10907,11738,15790,19113,25623,32012,
#Partially deleted in new
chr15	30362057	30393360	chr15:30362057-30393360	1	-	30362292	30373032	789624	11	754,110,87,195,168,80,47,174,64,125,109,	0,5360,9040,10089,10920,14972,18295,19645,21261,24805,31194,
#Partially deleted in new
chr15	30372992	30393849	chr15:30372992-30393849	0	-	30372992	30383351	789624	7	153,80,47,64,125,48,56,	0,4037,7360,10326,13870,20259,20801,
#Partially deleted in new
chr15	30373118	30393661	chr15:30373118-30393661	0	-	30373118	30373118	8553170	5	27,80,47,125,410,	0,3911,7234,13744,20133,
#Partially deleted in new
chr15	30380352	30386987	chr15:30380352-30386987	7	-	30380352	30380352	16724991	4	47,174,64,104,	0,1350,2966,6531,
#Partially deleted in new
chr15	30383043	30386987	chr15:30383043-30386987	0	-	30383043	30383043	8553170	2	339,125,	0,3819,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	30384958	30385091	chr15:30384958-30385091	3	-	30384958	30384958	8553170	1	133,	0,
#Partially deleted in new
chr15	30386943	30393820	chr15:30386943-30393820	0	-	30386943	30386943	8553170	3	44,245,27,	0,6308,6850,
#Partially deleted in new
chr15	30395145	30396368	chr15:30395145-30396368	7	+	30395145	30395145	16724991	2	180,298,	0,925,
#Partially deleted in new
chr15	30403739	30414162	chr15:30403739-30414162	3	-	30403739	30414162	789624	19	176,156,98,101,92,76,69,257,85,108,87,110,85,48,39,81,60,120,48,	0,261,512,692,1367,1890,3211,3535,4168,4448,4662,5801,6006,6179,6489,7379,7641,8589,10375,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	30405306	30405597	chr15:30405306-30405597	3	-	30405306	30405306	8553170	1	291,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	30409558	30412620	chr15:30409558-30412620	0	-	30409558	30409558	8553170	1	3062,	0,
#Deleted in new
chr15	30420282	30420429	chr15:30420282-30420429	7	-	30420282	30420282	16724991	1	147,	0,
#Partially deleted in new
chr15	30470778	30484689	chr15:30470778-30484689	5	+	30470778	30470778	16724991	6	648,174,156,170,166,188,	0,3577,7008,8245,9963,13723,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	30477820	30494007	chr15:30477820-30494007	4	+	30477820	30477820	16724991	4	122,170,185,419,	0,1203,6681,15768,
#Partially deleted in new
chr15	30479083	30481070	chr15:30479083-30481070	4	+	30479083	30479083	16724991	2	110,329,	0,1658,
#Partially deleted in new
chr15	30484543	30507623	chr15:30484543-30507623	7	+	30484543	30484543	16724991	3	143,228,247,	0,9045,22833,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	30487962	30490313	chr15:30487962-30490313	3	+	30487962	30487962	8553170	1	2351,	0,
#Partially deleted in new
chr15	30507376	30513698	chr15:30507376-30513698	7	+	30507376	30507376	16724991	5	670,155,172,142,67,	0,1026,1675,5270,6255,
#Partially deleted in new
chr15	30516078	30517867	chr15:30516078-30517867	7	+	30516078	30516078	16724991	3	62,164,930,	0,392,859,
#Partially deleted in new
chr15	30540092	30545969	chr15:30540092-30545969	3	+	30540092	30540092	8553170	3	447,96,158,	0,4472,5719,
#Partially deleted in new
chr15	30552077	30562501	chr15:30552077-30562501	3	+	30552077	30562501	789624	19	48,120,60,81,39,48,85,110,87,108,88,257,69,76,92,101,98,156,176,	0,1714,2723,2964,3896,4197,4333,4513,5673,5866,6169,6633,7145,8458,8965,9631,9814,10007,10248,
#Deleted in new
chr15	30558246	30559529	chr15:30558246-30559529	0	+	30558246	30558246	8553170	3	88,257,307,	0,464,976,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	30560643	30560934	chr15:30560643-30560934	3	+	30560643	30560643	8553170	1	291,	0,
#Partially deleted in new
chr15	30567821	30571089	chr15:30567821-30571089	7	-	30567821	30567821	16724991	3	67,269,172,	0,2082,3096,
#Partially deleted in new
chr15	30572737	30584566	chr15:30572737-30584566	5	+	30572737	30572737	16724991	4	279,125,64,166,	0,6550,10156,11663,
#Partially deleted in new
chr15	30572764	30600107	chr15:30572764-30600107	4	+	30572764	30572764	16724991	6	252,125,64,47,79,6,	0,6523,10129,13113,23895,27337,
#Partially deleted in new
chr15	30572884	30596984	chr15:30572884-30596984	4	+	30572884	30572884	16724991	3	132,125,325,	0,6403,23775,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	30572968	30600647	chr15:30572968-30600647	7	+	30572968	30572968	16724991	4	48,125,79,546,	0,6319,23691,27133,
#Partially deleted in new
chr15	30579284	30596738	chr15:30579284-30596738	5	+	30579284	30579284	16724991	5	128,64,174,47,79,	0,3609,5116,6593,17375,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	30581183	30581316	chr15:30581183-30581316	3	+	30581183	30581183	8553170	1	133,	0,
#Partially deleted in new
chr15	30604125	30614561	chr15:30604125-30614561	3	+	30604125	30614561	789624	19	48,120,60,81,39,48,85,110,87,108,88,257,69,76,92,101,98,156,176,	0,1717,2729,2970,3904,4205,4341,4521,5680,5873,6176,6640,7152,8471,8978,9644,9827,10020,10260,
#Deleted in new
chr15	30607694	30608193	chr15:30607694-30608193	3	-	30607694	30607694	8553170	1	499,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	30612723	30612960	chr15:30612723-30612960	3	+	30612723	30612723	8553170	1	237,	0,
#Deleted in new
chr15	30616957	30617749	chr15:30616957-30617749	3	+	30616957	30616957	8553170	1	792,	0,
#Partially deleted in new
chr15	30616997	30625773	chr15:30616997-30625773	3	-	30616997	30616997	8553170	2	247,723,	0,8053,
#Deleted in new
chr15	30624493	30626266	chr15:30624493-30626266	0	+	30624493	30624493	8553170	3	119,94,913,	0,229,860,
#Partially deleted in new
chr15	30624547	30634409	chr15:30624547-30634409	0	+	30624547	30624547	8553170	5	65,94,71,97,240,	0,175,6155,8942,9622,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	30626199	30685606	chr15:30626199-30685606	0	+	30626820	30635630	789624	11	750,71,97,254,109,147,75,64,182,47,246,	0,4503,7290,7970,8880,9287,12546,18439,19914,21468,59161,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	30626199	30685606	chr15:30626199-30685606	3	+	30626820	30635630	789624	11	750,71,97,254,109,147,75,64,182,47,246,	0,4503,7290,7970,8880,9287,12546,18439,19914,21468,59161,
#Partially deleted in new
chr15	30626675	30638805	chr15:30626675-30638805	3	+	30626820	30635630	789624	7	274,71,97,254,109,147,60,	0,4027,6814,7494,8404,8811,12070,
#Partially deleted in new
chr15	30630723	30635387	chr15:30630723-30635387	0	+	30630723	30630723	8553170	5	50,97,254,109,79,	0,2766,3446,4356,4585,
#Deleted in new
chr15	30634324	30635385	chr15:30634324-30635385	0	+	30634324	30634324	8553170	2	99,306,	0,755,
#Partially deleted in new
chr15	30644632	30658868	chr15:30644632-30658868	5	+	30644632	30644632	16724991	4	70,182,47,103,	0,1481,3035,14133,
#Partially deleted in new
chr15	30646131	30723495	chr15:30646131-30723495	7	+	30646131	30646131	16724991	4	164,47,123,150,	0,1536,70088,77214,
#Deleted in new
chr15	30648796	30649529	chr15:30648796-30649529	3	+	30648796	30648796	8553170	1	733,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	30658716	30772993	chr15:30658716-30772993	3	+	30658716	30658716	789624	5	128,123,95,155,5136,	0,57503,89859,91685,109141,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	30673749	30673843	chr15:30673749-30673843	3	+	30673749	30673749	8553170	1	94,	0,
#Partially deleted in new
chr15	30750405	30759859	chr15:30750405-30759859	7	+	30750405	30750405	16724991	2	171,72,	0,9382,
#Partially deleted in new
chr15	30791572	30801859	chr15:30791572-30801859	7	+	30791572	30791572	16724991	19	49,120,60,81,44,39,85,102,92,108,88,257,69,76,92,101,98,150,44,	0,1718,2734,2975,3908,4218,4343,4525,5665,5859,6162,6631,7140,8460,8967,9632,9815,10008,10243,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	30800159	30800396	chr15:30800159-30800396	3	+	30800159	30800159	8553170	1	237,	0,
#Partially deleted in new
chr15	30815270	30844153	chr15:30815270-30844153	7	+	30815270	30815270	16724991	16	180,145,226,172,175,141,60,121,126,150,112,126,156,116,179,208,	0,1259,2605,7276,8326,9385,12429,17520,19095,19657,19907,20923,21484,22306,22522,28675,
#Partially deleted in new
chr15	30882266	30883231	chr15:30882266-30883231	7	-	30882266	30882266	16724991	1	965,	0,
#Deleted in new
chr15	30899479	30900327	chr15:30899479-30900327	7	+	30899479	30899479	16724991	2	157,173,	0,675,
#Partially deleted in new
chr15	30903851	30911788	chr15:30903851-30911788	1	+	30904663	30910840	0	4	36,1386,141,1175,	0,660,4266,6762,
#Partially deleted in new
chr15	30903872	30943108	chr15:30903872-30943108	3	+	30904663	30937256	0	15	139,1386,141,202,234,132,109,120,165,151,104,195,129,141,1543,	0,639,4245,6741,9985,14291,16672,18362,21254,21916,24680,25330,26670,33246,37693,
#Partially deleted in new
chr15	30903891	30911643	chr15:30903891-30911643	1	+	30904663	30910840	0	4	133,1386,141,1030,	0,620,4226,6722,
#Partially deleted in new
chr15	30903892	30911271	chr15:30903892-30911271	1	+	30904663	30910840	0	4	119,1386,141,658,	0,619,4225,6721,
#Partially deleted in new
chr15	30903911	30943108	chr15:30903911-30943108	0	+	30904663	30906429	789624	16	113,1386,134,141,202,234,132,109,120,165,151,104,195,129,141,1543,	0,600,2459,4206,6702,9946,14252,16633,18323,21215,21877,24641,25291,26631,33207,37654,
#Partially deleted in new
chr15	30904509	30910735	chr15:30904509-30910735	0	+	30904538	30910735	789624	3	81,141,122,	0,3608,6104,
#Partially deleted in new
chr15	30922261	30930654	chr15:30922261-30930654	0	+	30922261	30922261	8553170	6	93,196,151,104,195,112,	0,2834,3527,6291,6941,8281,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	30926513	30928407	chr15:30926513-30928407	3	+	30926513	30926513	8553170	1	1894,	0,
#Deleted in new
chr15	30928423	30930639	chr15:30928423-30930639	0	+	30928423	30928423	8553170	3	233,195,97,	0,779,2119,
#Partially deleted in new
chr15	30938940	30991604	chr15:30938940-30991604	3	-	30941469	30991506	789624	16	3132,183,171,170,71,70,131,89,88,193,91,143,73,137,61,158,	0,3949,8189,9361,13027,14621,15822,19922,20093,21940,28979,35373,35990,37878,51836,52506,
#Partially deleted in new
chr15	30938947	30991603	chr15:30938947-30991603	0	-	30960890	30991506	789624	14	4125,171,170,71,70,131,89,88,193,143,73,137,61,157,	0,8182,9354,13020,14614,15815,19915,20086,21933,35366,35983,37871,51829,52499,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	30939524	30950336	chr15:30939524-30950336	0	-	30939524	30939524	8553170	4	2548,183,171,2035,	0,3365,7605,8777,
#Partially deleted in new
chr15	30941206	30974389	chr15:30941206-30974389	0	-	30960890	30974389	789624	10	47,171,170,71,70,131,89,88,193,76,	0,5923,7095,10761,12355,13556,17656,17827,19674,33107,
#Partially deleted in new
chr15	30941208	30991578	chr15:30941208-30991578	0	-	30966032	30991506	789624	17	864,183,171,170,71,70,131,89,88,193,166,91,143,73,137,61,132,	0,1681,5921,7093,10759,12353,13554,17654,17825,19672,24666,26711,33105,33722,35610,49568,50238,
#Partially deleted in new
chr15	30946209	30991415	chr15:30946209-30991415	1	-	30946725	30976830	789624	15	570,171,170,71,70,131,89,88,193,91,143,73,137,61,158,	0,920,2092,5758,7352,8553,12653,12824,14671,21710,28104,28721,30609,44567,45048,
#Partially deleted in new
chr15	30946403	30960933	chr15:30946403-30960933	0	-	30946702	30960933	789624	9	368,171,170,71,70,131,89,88,53,	0,726,1898,5564,7158,8359,12459,12630,14477,
#Partially deleted in new
chr15	30947053	30991596	chr15:30947053-30991596	0	-	30947053	30947053	8553170	13	247,170,71,70,131,89,88,193,143,73,137,61,150,	0,1248,4914,6508,7709,11809,11980,13827,27260,27877,29765,43723,44393,
#Deleted in new
chr15	30956247	30956350	chr15:30956247-30956350	3	-	30956247	30956247	8553170	1	103,	0,
#Partially deleted in new
chr15	30959045	30968211	chr15:30959045-30968211	0	-	30959045	30959045	8553170	3	76,193,292,	0,1835,8874,
#Partially deleted in new
chr15	30960880	30991607	chr15:30960880-30991607	0	-	30974971	30991506	789624	5	193,143,73,61,161,	0,13433,14050,29896,30566,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr15	31001060	31101707	chr15:31001060-31101707	3	-	31001821	31076921	789624	27	2010,133,203,145,21,175,252,129,132,123,229,293,30,141,51,135,174,101,73,124,175,172,125,214,196,80,51,	0,25078,25854,27271,28310,29922,31628,34485,36650,36983,39057,40890,45143,46050,46828,48314,49348,59483,60381,61518,62057,65015,66002,66818,68970,75844,100596,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr15	31001060	31161273	chr15:31001060-31161273	1	-	31001821	31160959	789624	27	2010,133,203,145,21,175,252,129,132,123,229,293,30,141,51,135,174,101,73,124,175,172,125,214,196,80,368,	0,25078,25854,27271,28310,29922,31628,34485,36650,36983,39057,40890,45143,46050,46828,48314,49348,59483,60381,61518,62057,65015,66002,66818,68970,75844,159845,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr15	31001333	31101721	chr15:31001333-31101721	1	-	31001821	31081355	789624	28	1737,133,203,145,21,175,252,129,132,123,229,293,30,141,51,135,174,101,73,124,175,172,125,214,196,80,86,65,	0,24805,25581,26998,28037,29649,31355,34212,36377,36710,38784,40617,44870,45777,46555,48041,49075,59210,60108,61245,61784,64742,65729,66545,68697,75571,80019,100323,
#Partially deleted in new
chr15	31001821	31068092	chr15:31001821-31068092	0	-	31001821	31068092	789624	24	1249,133,203,145,21,175,252,129,132,123,229,293,30,141,51,135,174,101,73,124,157,172,125,214,	0,24317,25093,26510,27549,29161,30867,33724,35889,36222,38296,40129,44382,45289,46067,47553,48587,58722,59620,60757,61314,64254,65241,66057,
#Partially deleted in new
chr15	31001821	31068092	chr15:31001821-31068092	0	-	31063113	31068092	789624	23	1249,133,203,145,21,252,129,132,123,229,293,30,141,51,135,174,101,73,124,205,172,125,214,	0,24317,25093,26510,27549,30867,33724,35889,36222,38296,40129,44382,45289,46067,47553,48587,58722,59620,60757,61266,64254,65241,66057,
#Partially deleted in new
chr15	31002012	31042302	chr15:31002012-31042302	0	+	31002012	31002012	8553170	3	18,170,75,	0,33740,40215,
#Partially deleted in new
chr15	31002463	31160954	chr15:31002463-31160954	0	-	31002463	31076921	789624	27	607,133,203,145,21,175,252,129,132,123,229,293,30,141,51,135,174,101,73,124,175,172,125,214,196,80,49,	0,23675,24451,25868,26907,28519,30225,33082,35247,35580,37654,39487,43740,44647,45425,46911,47945,58080,58978,60115,60654,63612,64599,65415,67567,74441,158442,
#Partially deleted in new
chr15	31002463	31160954	chr15:31002463-31160954	0	-	31002463	31076921	789624	8	607,133,203,145,214,196,80,49,	0,23675,24451,25868,65415,67567,74441,158442,
#Partially deleted in new
chr15	31026205	31035970	chr15:31026205-31035970	3	+	31026205	31026205	8553170	4	113,147,87,218,	0,759,9364,9547,
#Partially deleted in new
chr15	31026963	31031332	chr15:31026963-31031332	0	-	31026963	31026963	8553170	4	154,145,21,350,	0,1368,2407,4019,
#Partially deleted in new
chr15	31028435	31033015	chr15:31028435-31033015	0	-	31028435	31028435	8553170	4	41,21,175,327,	0,935,2547,4253,
#Partially deleted in new
chr15	31060234	31101706	chr15:31060234-31101706	0	-	31063113	31076921	789624	10	410,73,124,205,172,125,214,196,80,50,	0,1207,2344,2853,5841,6828,7644,9796,16670,41422,
#Partially deleted in new
chr15	31060464	31062751	chr15:31060464-31062751	0	-	31060464	31060464	8553170	3	180,73,173,	0,977,2114,
#Deleted in new
chr15	31065031	31065141	chr15:31065031-31065141	3	-	31065031	31065031	5263520	1	110,	0,
#Partially deleted in new
chr15	31069375	31101727	chr15:31069375-31101727	1	-	31069832	31076921	789624	3	851,80,71,	0,7529,32281,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	31216019	31220720	chr15:31216019-31220720	1	+	31216019	31216019	8553170	2	18,1432,	0,3269,
#Partially deleted in new
chr15	31216020	31224445	chr15:31216020-31224445	3	+	31216020	31216020	789624	2	17,451,	0,7974,
#Partially deleted in new
chr15	31221998	31229384	chr15:31221998-31229384	1	-	31221998	31221998	8553170	4	300,85,182,113,	0,433,1251,7273,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	31222766	31230838	chr15:31222766-31230838	3	-	31222766	31222766	8553170	4	570,242,80,132,	0,704,6505,7940,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	31222775	31229405	chr15:31222775-31229405	0	-	31222775	31222775	8553170	3	332,182,134,	0,474,6496,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	31222795	31230833	chr15:31222795-31230833	0	-	31222795	31222795	8553170	4	356,182,80,127,	0,454,6476,7911,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	31222962	31229410	chr15:31222962-31229410	0	-	31222962	31222962	8553170	2	469,139,	0,6309,
#Partially deleted in new
chr15	31326854	31377899	chr15:31326854-31377899	3	+	31327212	31372299	789624	2	935,5890,	0,45155,
#Partially deleted in new
chr15	31327566	31435586	chr15:31327566-31435586	0	+	31327566	31327566	8553170	2	223,217,	0,107803,
#Partially deleted in new
chr15	31339932	31372443	chr15:31339932-31372443	1	+	31339974	31372299	789624	2	55,434,	0,32077,
#Partially deleted in new
chr15	31366153	31372182	chr15:31366153-31372182	0	+	31372140	31372182	789624	2	401,173,	0,5856,
#Deleted in new
chr15	31376523	31377898	chr15:31376523-31377898	0	+	31376523	31376523	8553170	2	40,407,	0,968,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	31392842	31404729	chr15:31392842-31404729	0	+	31392842	31392842	8553170	3	413,116,1302,	0,733,10585,
#Partially deleted in new
chr15	31393574	31435665	chr15:31393574-31435665	0	+	31393574	31393574	8553170	2	117,296,	0,41795,
#Deleted in new
chr15	31420127	31420662	chr15:31420127-31420662	7	+	31420127	31420127	16724991	1	535,	0,
#Partially deleted in new
chr15	31453200	31454139	chr15:31453200-31454139	7	-	31453200	31453200	16724991	1	939,	0,
#Partially deleted in new
chr15	31475397	31655339	chr15:31475397-31655339	3	-	31483293	31655246	0	11	9327,85,115,150,128,92,128,102,219,180,244,	0,11796,12054,26292,28293,50951,51783,55309,83571,94620,179698,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	31555998	31870789	chr15:31555998-31870789	0	-	31570157	31655246	789624	9	2382,219,180,151,155,95,123,75,51,	0,2970,14019,93680,99097,100984,133360,314508,314740,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	31558182	31870578	chr15:31558182-31870578	0	-	31558182	31558182	8553170	6	1005,180,155,95,123,72,	0,11835,96913,98800,131176,312324,
#Partially deleted in new
chr15	31570017	31870677	chr15:31570017-31870677	0	-	31570017	31655246	789624	5	180,155,95,123,171,	0,85078,86965,119341,300489,
#Deleted in new
chr15	31765742	31768201	chr15:31765742-31768201	7	-	31765742	31765742	16724991	1	2459,	0,
#Deleted in new
chr15	31787493	31787734	chr15:31787493-31787734	7	+	31787493	31787493	16724991	1	241,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	31923437	32159643	chr15:31923437-32159643	0	+	32101344	32159643	789624	7	230,45,110,80,168,195,75,	0,177865,188352,230469,234170,234974,236131,
#Deleted in new
chr15	31928302	31928434	chr15:31928302-31928434	3	+	31928302	31928302	8553170	1	132,	0,
#Partially deleted in new
chr15	31966430	32168880	chr15:31966430-32168880	1	+	32031028	32168458	789624	10	136,140,45,110,80,168,195,87,110,941,	0,64467,134872,145359,187476,191177,191981,193138,196795,201509,
#Partially deleted in new
chr15	31966470	32168157	chr15:31966470-32168157	0	+	32157720	32168157	789624	9	96,140,45,80,168,195,87,110,218,	0,64427,134832,187436,191137,191941,193098,196755,201469,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	31978055	32169917	chr15:31978055-32169917	1	+	32101344	32168458	789624	9	139,45,110,80,168,195,87,110,1978,	0,123247,133734,175851,179552,180356,181513,185170,189884,
#Partially deleted in new
chr15	32029933	32169048	chr15:32029933-32169048	1	+	32031028	32168202	789624	9	41,140,45,110,80,168,195,87,1109,	0,964,71369,81856,123973,127674,128478,129635,138006,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	32029933	32170167	chr15:32029933-32170167	1	+	32031028	32168458	789624	10	41,140,45,110,80,168,195,87,110,2228,	0,964,71369,81856,123973,127674,128478,129635,133292,138006,
#Partially deleted in new
chr15	32030461	32169010	chr15:32030461-32169010	0	+	32030594	32153912	789624	9	188,140,45,80,168,195,87,110,1071,	0,436,70841,123445,127146,127950,129107,132764,137478,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	32030482	32173018	chr15:32030482-32173018	3	+	32030594	32168458	0	10	167,140,45,110,80,168,195,87,110,5079,	0,415,70820,81307,123424,127125,127929,129086,132743,137457,
#Partially deleted in new
chr15	32030487	32168848	chr15:32030487-32168848	1	+	32030594	32168458	0	10	249,140,45,110,80,168,195,87,110,909,	0,410,70815,81302,123419,127120,127924,129081,132738,137452,
#Partially deleted in new
chr15	32030493	32163271	chr15:32030493-32163271	0	+	32030594	32163271	789624	9	156,140,45,110,80,168,123,87,46,	0,404,70809,81296,123413,127114,127990,129075,132732,
#Partially deleted in new
chr15	32030511	32163271	chr15:32030511-32163271	0	+	32030594	32157506	789624	6	138,140,320,195,78,46,	0,386,126944,127900,129066,132714,
#Partially deleted in new
chr15	32030511	32168866	chr15:32030511-32168866	0	+	32030594	32157676	789624	11	138,140,45,110,124,168,195,87,110,197,927,	0,386,70791,81278,81728,127096,127900,129057,132714,136848,137428,
#Partially deleted in new
chr15	32030511	32163271	chr15:32030511-32163271	0	+	32030594	32153912	789624	10	138,140,45,110,124,80,168,195,87,46,	0,386,70791,81278,81728,123395,127096,127900,129057,132714,
#Partially deleted in new
chr15	32030544	32168107	chr15:32030544-32168107	0	+	32030594	32153912	789624	11	105,140,45,110,127,80,168,195,87,110,168,	0,353,70758,81245,81692,123362,127063,127867,129024,132681,137395,
#Partially deleted in new
chr15	32030555	32168888	chr15:32030555-32168888	0	+	32030594	32157676	0	8	94,140,45,168,195,87,110,949,	0,342,70747,127052,127856,129013,132670,137384,
#Partially deleted in new
chr15	32030576	32112261	chr15:32030576-32112261	0	+	32030594	32111841	789624	5	73,140,45,100,25,	0,321,70726,81223,81660,
#Partially deleted in new
chr15	32030594	32163271	chr15:32030594-32163271	0	+	32030594	32157656	789624	8	55,140,45,110,168,195,87,46,	0,303,70708,81195,127013,127817,128974,132631,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	32030594	32103267	chr15:32030594-32103267	0	+	32030594	32030594	8553170	3	55,140,1965,	0,303,70708,
#Partially deleted in new
chr15	32030594	32163271	chr15:32030594-32163271	0	+	32030594	32111841	789624	9	55,140,45,100,80,168,195,87,46,	0,303,70708,81205,123312,127013,127817,128974,132631,
#Partially deleted in new
chr15	32030660	32163271	chr15:32030660-32163271	0	+	32030660	32163271	789624	9	76,140,45,110,80,168,123,87,46,	0,237,70642,81129,123246,126947,127823,128908,132565,
#Partially deleted in new
chr15	32030853	32163273	chr15:32030853-32163273	0	+	32030853	32030853	8553170	8	184,45,110,80,168,195,87,48,	0,70449,80936,123053,126754,127558,128715,132372,
#Partially deleted in new
chr15	32030976	32112330	chr15:32030976-32112330	0	+	32030976	32111841	789624	4	61,45,73,94,	0,70326,80850,81260,
#Partially deleted in new
chr15	32031000	32168884	chr15:32031000-32168884	0	+	32031000	32167434	789624	10	37,45,110,80,168,195,87,110,197,945,	0,70302,80789,122906,126607,127411,128568,132225,136359,136939,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	32098656	32102082	chr15:32098656-32102082	0	+	32098656	32098656	8553170	1	3426,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	32111179	32171422	chr15:32111179-32171422	0	+	32111179	32111179	8553170	7	720,80,168,195,87,110,3483,	0,42727,46428,47232,48389,52046,56760,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	32153387	32163271	chr15:32153387-32163271	0	+	32153387	32153387	8553170	4	599,168,1244,46,	0,4220,5024,9838,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	32155986	32163708	chr15:32155986-32163708	0	+	32155986	32155986	8553170	1	7722,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	32156136	32169048	chr15:32156136-32169048	0	+	32156136	32156136	8553170	6	125,168,195,87,110,1109,	0,1471,2275,3432,7089,11803,
#Partially deleted in new
chr15	32156671	32163271	chr15:32156671-32163271	0	+	32156671	32156671	8553170	5	126,168,195,87,46,	0,936,1740,2897,6554,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	32157037	32172990	chr15:32157037-32172990	0	+	32157037	32157037	8553170	5	738,195,87,110,5051,	0,1374,2531,6188,10902,
#Partially deleted in new
chr15	32157575	32163271	chr15:32157575-32163271	0	+	32157575	32157575	8553170	4	196,195,87,46,	0,836,1993,5650,
#Partially deleted in new
chr15	32157611	32168162	chr15:32157611-32168162	0	+	32157611	32168162	789624	4	164,195,110,223,	0,800,5614,10328,
#Deleted in new
chr15	32158482	32159008	chr15:32158482-32159008	0	+	32158482	32158482	8553170	1	526,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	32158494	32160942	chr15:32158494-32160942	0	+	32158494	32160466	789624	3	112,87,493,	0,1074,1955,
#Partially deleted in new
chr15	32158585	32166583	chr15:32158585-32166583	0	+	32158585	32165701	789624	4	21,87,110,918,	0,983,4640,7080,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	32175246	32175351	chr15:32175246-32175351	3	-	32175246	32175246	8553170	1	105,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	32182550	32186475	chr15:32182550-32186475	3	+	32182550	32182550	8553170	1	3925,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	32250301	32256125	chr15:32250301-32256125	7	-	32250301	32250301	16724991	10	253,367,205,109,221,46,277,64,91,426,	0,645,1302,2076,3396,4014,4188,4800,4986,5398,
#Deleted in new
chr15	32313125	32315654	chr15:32313125-32315654	7	-	32313125	32313125	16724991	1	2529,	0,
#Partially deleted in new
chr15	32359537	32367784	chr15:32359537-32367784	3	+	32359537	32359537	8553170	3	121,64,66,	0,8037,8181,
#Partially deleted in new
chr15	32384936	32387484	chr15:32384936-32387484	7	+	32384936	32384936	16724991	3	152,335,209,	0,887,2339,
#Partially deleted in new
chr15	32392781	32403195	chr15:32392781-32403195	3	-	32392781	32403194	789624	19	176,156,98,98,89,76,69,257,88,108,87,110,85,48,39,81,60,120,49,	0,260,511,691,1363,1883,3181,3505,4138,4421,4635,5778,5983,6156,6466,7358,7620,8574,10365,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	32394364	32394613	chr15:32394364-32394613	3	-	32394364	32394364	8553170	1	249,	0,
#Partially deleted in new
chr15	32398955	32435233	chr15:32398955-32435233	3	-	32398955	32398955	8553170	13	30,39,81,60,120,80,220,79,47,64,125,48,104,	0,292,1184,1446,2400,7263,8042,11626,22726,25689,29235,35632,36174,
#Deleted in new
chr15	32401906	32403292	chr15:32401906-32403292	0	-	32401906	32401906	8553170	1	1386,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	32406596	32434637	chr15:32406596-32434637	7	-	32406596	32406596	16724991	4	621,79,125,50,	0,3985,21594,27991,
#Partially deleted in new
chr15	32410557	32428316	chr15:32410557-32428316	5	-	32410557	32410557	16724991	5	103,47,184,64,105,	0,11124,12461,14087,17654,
#Partially deleted in new
chr15	32410580	32434992	chr15:32410580-32434992	5	-	32410580	32410580	16724991	5	80,47,64,125,405,	0,11101,14064,17610,24007,
#Partially deleted in new
chr15	32424507	32434884	chr15:32424507-32434884	4	-	32424507	32424507	16724991	3	201,125,297,	0,3683,10080,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	32426287	32426420	chr15:32426287-32426420	3	-	32426287	32426287	8553170	1	133,	0,
#Partially deleted in new
chr15	32436502	32439767	chr15:32436502-32439767	7	+	32436502	32436502	16724991	3	174,303,67,	0,919,3198,
#Partially deleted in new
chr15	32445105	32455634	chr15:32445105-32455634	3	-	32445105	32455536	789624	19	176,156,98,101,92,76,69,257,88,108,87,110,85,48,39,81,60,120,146,	0,261,512,692,1368,1891,3212,3536,4169,4452,4666,5807,6012,6185,6495,7385,7647,8597,10383,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	32446673	32446964	chr15:32446673-32446964	3	-	32446673	32446673	8553170	1	291,	0,
#Partially deleted in new
chr15	32451164	32454902	chr15:32451164-32454902	0	-	32451164	32454742	789624	7	38,48,39,81,60,120,169,	0,126,436,1326,1588,2538,3569,
#Deleted in new
chr15	32461665	32461809	chr15:32461665-32461809	7	-	32461665	32461665	16724991	1	144,	0,
#Partially deleted in new
chr15	32489266	32491586	chr15:32489266-32491586	7	-	32489266	32489266	16724991	4	198,840,164,60,	0,623,1766,2260,
#Partially deleted in new
chr15	32494002	32500346	chr15:32494002-32500346	7	-	32494002	32494002	16724991	5	82,142,172,155,675,	0,926,4492,5158,5669,
#Partially deleted in new
chr15	32519847	32526891	chr15:32519847-32526891	5	-	32519847	32519847	16724991	3	364,185,79,	0,3181,6965,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	32522692	32533741	chr15:32522692-32533741	4	-	32522692	32522692	16724991	6	521,130,166,170,156,530,	0,1778,4120,5839,7090,10519,
#Partially deleted in new
chr15	32523025	32536926	chr15:32523025-32536926	7	-	32523025	32523025	16724991	7	188,130,166,170,156,174,629,	0,1445,3787,5506,6757,10169,13272,
#Partially deleted in new
chr15	32526649	32528641	chr15:32526649-32528641	4	-	32526649	32526649	16724991	2	329,110,	0,1882,
#Deleted in new
chr15	32528602	32529896	chr15:32528602-32529896	4	-	32528602	32528602	16724991	2	99,114,	0,1180,
#Partially deleted in new
chr15	32536046	32587613	chr15:32536046-32587613	3	+	32536046	32536046	8553170	3	103,96,344,	0,49976,51223,
#Deleted in new
chr15	32583611	32584312	chr15:32583611-32584312	3	+	32583611	32583611	8553170	1	701,	0,
#Partially deleted in new
chr15	32586104	32614696	chr15:32586104-32614696	3	-	32586104	32586104	8553170	3	156,107,260,	0,11534,28332,
#Partially deleted in new
chr15	32586104	32614714	chr15:32586104-32614714	0	-	32586104	32586104	8553170	2	156,278,	0,28332,
#Partially deleted in new
chr15	32593455	32607310	chr15:32593455-32607310	3	+	32593553	32603978	789624	19	146,120,60,81,39,48,85,110,87,108,88,257,69,76,92,101,98,156,3508,	0,1812,2822,3063,3995,4296,4432,4612,5771,5964,6267,6731,7243,8557,9064,9730,9913,10106,10347,
#Deleted in new
chr15	32593455	32594840	chr15:32593455-32594840	0	+	32593455	32593455	8553170	1	1385,	0,
#Partially deleted in new
chr15	32593459	32596780	chr15:32593459-32596780	0	+	32593459	32593459	8553170	4	142,120,60,262,	0,1808,2818,3059,
#Partially deleted in new
chr15	32593553	32603978	chr15:32593553-32603978	1	+	32593553	32603978	789624	18	48,120,60,81,39,48,85,110,87,88,257,69,76,92,101,98,156,176,	0,1714,2724,2965,3897,4198,4334,4514,5673,6169,6633,7145,8459,8966,9632,9815,10008,10249,
#Partially deleted in new
chr15	32594187	32597925	chr15:32594187-32597925	0	+	32594347	32597925	789624	7	169,120,60,81,39,48,38,	0,1080,2090,2331,3263,3564,3700,
#Deleted in new
chr15	32596247	32597640	chr15:32596247-32597640	0	+	32596247	32596247	8553170	2	90,1122,	0,271,
#Partially deleted in new
chr15	32602011	32603287	chr15:32602011-32603287	0	+	32602011	32602011	8553170	3	77,92,102,	0,508,1174,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	32602120	32602411	chr15:32602120-32602411	3	+	32602120	32602120	8553170	1	291,	0,
#Partially deleted in new
chr15	32606412	32615158	chr15:32606412-32615158	1	-	32606412	32606412	8553170	2	247,722,	0,8024,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	32613732	32615111	chr15:32613732-32615111	3	+	32613732	32613732	8553170	3	266,94,372,	0,376,1007,
#Partially deleted in new
chr15	32615143	32638110	chr15:32615143-32638110	1	+	32625095	32637845	0	12	110,71,97,254,164,147,75,168,130,109,139,1854,	0,4964,8348,9029,9936,10343,13584,14451,17835,18789,20633,21113,
#Deleted in new
chr15	32615151	32616250	chr15:32615151-32616250	0	+	32615151	32615151	8553170	2	102,446,	0,653,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	32615489	32639949	chr15:32615489-32639949	3	+	32616211	32637845	0	12	851,71,97,254,164,147,75,168,130,109,139,3693,	0,4618,8002,8683,9590,9997,13238,14105,17489,18443,20287,20767,
#Partially deleted in new
chr15	32615538	32636181	chr15:32615538-32636181	1	+	32616211	32635938	0	11	802,71,97,254,164,147,75,168,130,109,405,	0,4569,7953,8634,9541,9948,13189,14056,17440,18394,20238,
#Partially deleted in new
chr15	32615564	32636148	chr15:32615564-32636148	1	+	32616211	32635938	789624	11	776,71,97,254,164,147,75,168,46,109,372,	0,4543,7927,8608,9515,9922,13163,14030,17498,18368,20212,
#Partially deleted in new
chr15	32615570	32637903	chr15:32615570-32637903	1	+	32625095	32637845	0	13	37,114,71,97,254,164,147,75,168,130,109,139,1647,	0,234,4537,7921,8602,9509,9916,13157,14024,17408,18362,20206,20686,
#Partially deleted in new
chr15	32628727	32636342	chr15:32628727-32636342	0	+	32628727	32636342	789624	6	75,81,130,109,139,86,	0,867,4251,5205,7049,7529,
#Partially deleted in new
chr15	32632824	32636296	chr15:32632824-32636296	0	+	32632824	32632824	8553170	4	284,109,139,40,	0,1108,2952,3432,
#Partially deleted in new
chr15	32641675	32697098	chr15:32641675-32697098	3	+	32643592	32696609	789624	6	103,233,150,113,54,585,	0,1910,38090,42881,50034,54838,
#Partially deleted in new
chr15	32641675	32697098	chr15:32641675-32697098	1	+	32643592	32696609	789624	6	103,233,150,110,54,585,	0,1910,38090,42884,50034,54838,
#Partially deleted in new
chr15	32641698	32697088	chr15:32641698-32697088	1	+	32643592	32696609	789624	5	80,233,150,110,575,	0,1887,38067,42861,54815,
#Partially deleted in new
chr15	32641701	32696889	chr15:32641701-32696889	1	+	32643592	32696609	789624	5	77,233,150,113,376,	0,1884,38064,42855,54812,
#Partially deleted in new
chr15	32643622	32691909	chr15:32643622-32691909	0	+	32643622	32691901	789624	4	196,150,113,200,	0,36143,40934,48087,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	32656083	32669092	chr15:32656083-32669092	3	-	32656083	32656083	8553170	3	195,144,93,	0,10261,12916,
#Partially deleted in new
chr15	32665701	32673065	chr15:32665701-32673065	1	-	32665701	32665701	789624	4	216,50,119,76,	0,737,3298,7288,
#Partially deleted in new
chr15	32673054	32691763	chr15:32673054-32691763	0	+	32673054	32673054	8553170	4	87,150,110,54,	0,6711,11505,18655,
#Partially deleted in new
chr15	32677559	32696626	chr15:32677559-32696626	0	+	32677559	32677559	8553170	5	185,150,110,54,113,	0,2206,7000,14150,18954,
#Partially deleted in new
chr15	32684415	32692308	chr15:32684415-32692308	0	+	32684415	32684415	8553170	2	254,599,	0,7294,
#Partially deleted in new
chr15	32684439	32697096	chr15:32684439-32697096	0	+	32684439	32684439	8553170	3	230,54,583,	0,7270,12074,
#Deleted in new
chr15	32717269	32719007	chr15:32717269-32719007	3	-	32717269	32717269	8553170	1	1738,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	32717973	32745107	chr15:32717973-32745107	3	+	32730690	32731245	0	2	188,14418,	0,12716,
#Partially deleted in new
chr15	32718003	32731275	chr15:32718003-32731275	1	+	32730690	32730940	789624	3	158,105,360,	0,12686,12912,
#Partially deleted in new
chr15	32718003	32733302	chr15:32718003-32733302	1	+	32730690	32731245	0	3	158,115,2375,	0,12686,12924,
#Deleted in new
chr15	32718100	32718854	chr15:32718100-32718854	1	-	32718100	32718100	789624	2	264,310,	0,444,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr15	32765544	33194733	chr15:32765544-33194733	1	-	32774309	33154914	789624	21	8810,85,150,52,93,121,60,147,130,89,62,88,151,764,62,118,176,1998,65,152,156,	0,11290,33259,38736,91470,122627,133289,134434,136366,142945,144929,160629,198562,203169,242469,299412,323254,387503,414653,428364,429033,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr15	32765545	33067884	chr15:32765545-33067884	3	-	32774309	33067884	789624	17	8809,85,150,52,93,121,60,147,130,89,62,88,151,764,62,118,1374,	0,11289,33258,38735,91469,122626,133288,134433,136365,142944,144928,160628,198561,203168,242468,299411,300965,
#Partially deleted in new
chr15	32774150	33155040	chr15:32774150-33155040	1	-	32774309	33154914	789624	16	204,85,150,52,93,121,60,147,130,89,62,88,151,764,62,1993,	0,2684,24653,30130,82864,114021,124683,125828,127760,134339,136323,152023,189956,194563,233863,378897,
#Partially deleted in new
chr15	32774309	33154914	chr15:32774309-33154914	1	-	32774309	33154914	789624	18	45,85,150,52,93,121,60,147,130,89,62,88,151,764,62,118,176,1867,	0,2525,24494,29971,82705,113862,124524,125669,127601,134180,136164,151864,189797,194404,233704,290647,314489,378738,
#Partially deleted in new
chr15	32774322	32860837	chr15:32774322-32860837	0	-	32774322	32774322	8553170	6	32,85,150,52,93,158,	0,2512,24481,29958,82692,86357,
#Partially deleted in new
chr15	32810894	32888254	chr15:32810894-32888254	0	-	32810944	32888254	789624	3	217,93,83,	0,46120,77277,
#Deleted in new
chr15	32836982	32837326	chr15:32836982-32837326	7	-	32836982	32836982	16724991	1	344,	0,
#Partially deleted in new
chr15	32899794	32926260	chr15:32899794-32926260	0	-	32899948	32926260	789624	5	331,130,89,62,87,	0,2116,8695,10679,26379,
#Partially deleted in new
chr15	32899806	32902040	chr15:32899806-32902040	0	-	32900207	32902040	789624	2	446,130,	0,2104,
#Partially deleted in new
chr15	32908158	32926261	chr15:32908158-32926261	0	-	32908158	32908158	8553170	3	420,62,88,	0,2315,18015,
#Deleted in new
chr15	32970726	32970791	chr15:32970726-32970791	3	+	32970726	32970726	8553170	1	65,	0,
#Deleted in new
chr15	33012118	33013068	chr15:33012118-33013068	7	+	33012118	33012118	16724991	1	950,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	33062666	33068162	chr15:33062666-33068162	1	-	33064936	33067884	789624	2	2408,1652,	0,3844,
#Deleted in new
chr15	33064425	33068032	chr15:33064425-33068032	0	-	33064425	33064425	8553170	2	649,239,	0,3368,
#Deleted in new
chr15	33105757	33106236	chr15:33105757-33106236	3	-	33105757	33105757	8553170	1	479,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	33149783	33194696	chr15:33149783-33194696	1	-	33151257	33154914	789624	5	1596,1998,65,152,119,	0,3264,30414,44125,44794,
#Partially deleted in new
chr15	33235551	33242290	chr15:33235551-33242290	5	-	33235551	33235551	16724991	3	1447,65,56,	0,5982,6683,
#Partially deleted in new
chr15	33235754	33246603	chr15:33235754-33246603	7	-	33235754	33235754	16724991	10	193,43,76,65,60,57,119,118,129,34,	0,834,1168,5779,6395,6949,9140,9566,10000,10815,
#Partially deleted in new
chr15	33242719	33247621	chr15:33242719-33247621	5	-	33242719	33242719	16724991	6	41,69,51,150,45,153,	0,1517,2243,3035,3849,4749,
#Deleted in new
chr15	33243738	33244987	chr15:33243738-33244987	4	-	33243738	33243738	16724991	3	311,69,25,	0,498,1224,
#Deleted in new
chr15	33244974	33245837	chr15:33244974-33245837	4	-	33244974	33244974	16724991	2	464,83,	0,780,
#Deleted in new
chr15	33245328	33247554	chr15:33245328-33247554	4	-	33245328	33245328	16724991	4	110,150,111,86,	0,426,1174,2140,
#Partially deleted in new
chr15	33303656	33310246	chr15:33303656-33310246	3	-	33303656	33303656	789624	3	282,100,97,	0,2675,6493,
#Partially deleted in new
chr15	33303658	33310659	chr15:33303658-33310659	0	-	33303658	33303658	789624	3	280,100,82,	0,2673,6919,
#Partially deleted in new
chr15	33310944	33866103	chr15:33310944-33866103	3	+	33311045	33865226	0	104	152,120,108,75,79,113,100,94,75,157,174,122,169,136,96,119,134,242,193,217,105,104,84,160,148,206,175,209,176,37,164,166,87,227,796,201,103,138,274,115,130,104,136,181,112,121,170,221,91,141,164,79,90,147,63,76,124,116,68,122,50,61,239,82,131,321,241,88,93,15,171,60,132,113,97,107,52,57,100,80,77,74,18,81,89,129,105,82,1328,59,172,87,201,131,43,128,61,147,135,157,65,101,52,973,	0,162474,192686,219647,222366,228405,229846,232677,237185,239215,251892,255733,269031,270563,273450,275053,290474,292178,302238,312862,317526,318995,320265,322004,323641,324669,325431,333366,335406,336479,338127,341773,348775,349252,351208,352592,358409,359474,385273,386937,388759,390032,395974,411770,413120,415441,417912,420529,425290,427505,428887,431421,435123,437169,437523,439034,439218,444120,445361,446530,457713,458167,460975,462589,469266,474717,477273,489825,490924,496610,499534,500033,501918,502522,505917,507633,508811,509811,510325,510578,512051,514658,515307,515727,516254,520018,524023,525961,526686,529880,530919,532543,533917,537346,542100,542610,543444,543821,546835,548630,549650,550133,553193,554186,
#Partially deleted in new
chr15	33310961	33866101	chr15:33310961-33866101	1	+	33311045	33865226	0	103	135,120,108,75,79,113,100,94,75,157,174,122,169,136,96,119,134,242,193,217,105,104,84,160,148,206,175,209,176,37,164,166,87,227,796,201,103,138,274,115,130,104,136,181,112,121,170,221,91,141,164,79,90,147,63,76,124,116,68,122,50,61,239,82,131,321,241,88,93,171,60,132,113,97,107,52,57,100,80,77,74,18,81,89,129,105,82,1328,59,172,87,201,131,43,128,61,147,135,157,65,101,52,971,	0,162457,192669,219630,222349,228388,229829,232660,237168,239198,251875,255716,269014,270546,273433,275036,290457,292161,302221,312845,317509,318978,320248,321987,323624,324652,325414,333349,335389,336462,338110,341756,348758,349235,351191,352575,358392,359457,385256,386920,388742,390015,395957,411753,413103,415424,417895,420512,425273,427488,428870,431404,435106,437152,437506,439017,439201,444103,445344,446513,457696,458150,460958,462572,469249,474700,477256,489808,490907,499517,500016,501901,502505,505900,507616,508794,509794,510308,510561,512034,514641,515290,515710,516237,520001,524006,525944,526669,529863,530902,532526,533900,537329,542083,542593,543427,543804,546818,548613,549633,550116,553176,554169,
#Partially deleted in new
chr15	33310975	33866098	chr15:33310975-33866098	1	+	33311045	33865226	789624	104	121,120,108,75,79,113,100,94,75,157,174,122,169,136,96,119,134,242,193,217,105,104,84,160,148,206,175,209,176,37,164,166,87,227,796,201,103,138,274,115,130,104,136,181,109,121,170,221,91,141,164,79,90,147,63,76,124,116,68,122,50,61,239,82,131,321,241,88,93,15,171,60,132,113,97,107,52,57,100,80,77,74,18,81,89,129,105,82,1328,59,172,87,201,131,43,128,61,147,135,157,65,101,52,968,	0,162443,192655,219616,222335,228374,229815,232646,237154,239184,251861,255702,269000,270532,273419,275022,290443,292147,302207,312831,317495,318964,320234,321973,323610,324638,325400,333335,335375,336448,338096,341742,348744,349221,351177,352561,358378,359443,385242,386906,388728,390001,395943,411739,413092,415410,417881,420498,425259,427474,428856,431390,435092,437138,437492,439003,439187,444089,445330,446499,457682,458136,460944,462558,469235,474686,477242,489794,490893,496579,499503,500002,501887,502491,505886,507602,508780,509780,510294,510547,512020,514627,515276,515696,516223,519987,523992,525930,526655,529849,530888,532512,533886,537315,542069,542579,543413,543790,546804,548599,549619,550102,553162,554155,
#Partially deleted in new
chr15	33310975	33866098	chr15:33310975-33866098	1	+	33311045	33865226	789624	105	121,120,108,75,79,113,100,94,75,157,174,122,169,136,96,119,134,242,193,217,105,104,84,160,148,206,175,209,176,37,164,166,87,227,796,201,103,138,274,115,130,104,136,181,112,121,170,221,91,141,164,79,90,147,63,76,124,116,68,122,54,57,239,82,131,321,241,88,93,15,171,60,132,117,5,97,107,52,57,100,80,77,74,18,81,89,129,105,82,1328,59,172,87,201,131,43,128,61,147,135,157,65,101,52,968,	0,162443,192655,219616,222335,228374,229815,232646,237154,239184,251861,255702,269000,270532,273419,275022,290443,292147,302207,312831,317495,318964,320234,321973,323610,324638,325400,333335,335375,336448,338096,341742,348744,349221,351177,352561,358378,359443,385242,386906,388728,390001,395943,411739,413089,415410,417881,420498,425259,427474,428856,431390,435092,437138,437492,439003,439187,444089,445330,446499,457682,458140,460944,462558,469235,474686,477242,489794,490893,496579,499503,500002,501887,502491,504437,505886,507602,508780,509780,510294,510547,512020,514627,515276,515696,516223,519987,523992,525930,526655,529849,530888,532512,533886,537315,542069,542579,543413,543790,546804,548599,549619,550102,553162,554155,
#Partially deleted in new
chr15	33311045	33865724	chr15:33311045-33865724	1	+	33311045	33865226	789624	102	51,120,108,75,79,113,100,94,75,157,174,122,169,136,96,119,134,242,193,217,105,104,84,160,148,206,175,209,176,37,164,166,87,227,796,201,103,138,274,115,130,104,136,181,109,121,170,221,91,141,164,79,90,147,63,76,124,116,68,122,50,61,239,82,131,321,241,88,93,171,60,132,113,100,107,52,57,100,80,77,74,81,89,129,105,82,1328,59,172,87,201,131,43,128,61,147,135,157,65,101,52,594,	0,162373,192585,219546,222265,228304,229745,232576,237084,239114,251791,255632,268930,270462,273349,274952,290373,292077,302137,312761,317425,318894,320164,321903,323540,324568,325330,333265,335305,336378,338026,341672,348674,349151,351107,352491,358308,359373,385172,386836,388658,389931,395873,411669,413022,415340,417811,420428,425189,427404,428786,431320,435022,437068,437422,438933,439117,444019,445260,446429,457612,458066,460874,462488,469165,474616,477172,489724,490823,499433,499932,501817,502421,504788,507532,508710,509710,510224,510477,511950,514557,515626,516153,519917,523922,525860,526585,529779,530818,532442,533816,537245,541999,542509,543343,543720,546734,548529,549549,550032,553092,554085,
#Partially deleted in new
chr15	33311067	33503738	chr15:33311067-33503738	0	+	33311067	33503738	789624	2	29,108,	0,192563,
#Partially deleted in new
chr15	33533321	33539181	chr15:33533321-33539181	0	+	33533321	33533321	8553170	2	68,32,	0,5828,
#Partially deleted in new
chr15	33628507	33629921	chr15:33628507-33629921	0	+	33628507	33628507	8553170	2	68,32,	0,1382,
#Deleted in new
chr15	33646288	33649095	chr15:33646288-33649095	0	+	33646288	33646288	8553170	3	39,37,24,	0,1135,2783,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	33722491	33722596	chr15:33722491-33722596	3	+	33722491	33722491	8553170	1	105,	0,
#Partially deleted in new
chr15	33724151	33865879	chr15:33724151-33865879	0	+	33724151	33807734	789624	59	25,121,170,221,91,141,164,79,90,147,63,76,124,116,68,122,50,61,239,82,131,321,241,88,93,246,171,60,132,113,97,107,52,57,100,80,77,74,18,81,89,129,105,1328,59,172,87,201,131,43,128,61,147,135,157,65,101,52,749,	0,2234,4705,7322,12083,14298,15680,18214,21916,23962,24316,25827,26011,30913,32154,33323,44506,44960,47768,49382,56059,61510,64066,76618,77717,83403,86327,86826,88711,89315,92710,94426,95604,96604,97118,97371,98844,101451,102100,102520,103047,106811,110816,113479,116673,117712,119336,120710,124139,128893,129403,130237,130614,133628,135423,136443,136926,139986,140979,
#Deleted in new
chr15	33757537	33757808	chr15:33757537-33757808	0	+	33757537	33757537	8553170	2	59,41,	0,230,
#Deleted in new
chr15	33810660	33811016	chr15:33810660-33811016	0	+	33810660	33810660	8553170	2	61,39,	0,317,
#Deleted in new
chr15	33813504	33813738	chr15:33813504-33813738	0	+	33813504	33813504	8553170	2	75,68,	0,166,
#Partially deleted in new
chr15	33813704	33816919	chr15:33813704-33816919	0	+	33813704	33813704	8553170	2	42,58,	0,3157,
#Deleted in new
chr15	33820716	33821334	chr15:33820716-33821334	0	+	33820716	33820716	8553170	2	96,65,	0,553,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	33821292	33825819	chr15:33821292-33825819	0	+	33821292	33821292	8553170	4	77,80,77,217,	0,230,1703,4310,
#Deleted in new
chr15	33830792	33830993	chr15:33830792-33830993	0	+	33830792	33830792	8553170	2	69,31,	0,170,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	33834978	33850669	chr15:33834978-33850669	0	+	33834978	33834978	8553170	8	94,82,1328,59,172,201,131,1647,	0,1927,2652,5846,6885,9883,13312,14044,
#Deleted in new
chr15	33836912	33837946	chr15:33836912-33837946	0	+	33836912	33837946	789624	2	75,25,	0,1009,
#Deleted in new
chr15	33836916	33838331	chr15:33836916-33838331	0	+	33836916	33838331	789624	2	71,29,	0,1386,
#Partially deleted in new
chr15	33838348	33866090	chr15:33838348-33866090	0	+	33838348	33844869	789624	15	610,59,172,205,131,43,128,61,147,135,157,65,101,52,960,	0,2476,3515,6509,9942,14696,15206,16040,16417,19431,21226,22246,22729,25789,26782,
#Partially deleted in new
chr15	33838552	33866077	chr15:33838552-33866077	0	+	33838552	33855898	789624	16	406,59,172,201,131,43,128,61,147,168,135,157,65,101,52,947,	0,2272,3311,6309,9738,14492,15002,15836,16213,17331,19227,21022,22042,22525,25585,26578,
#Partially deleted in new
chr15	33838658	33866121	chr15:33838658-33866121	0	+	33838658	33865226	789624	15	300,59,172,201,131,43,128,61,147,135,157,65,101,52,991,	0,2166,3205,6203,9632,14386,14896,15730,16107,19121,20916,21936,22419,25479,26472,
#Deleted in new
chr15	33838903	33839715	chr15:33838903-33839715	0	+	33838903	33838903	8553170	2	55,45,	0,767,
#Partially deleted in new
chr15	33838947	33841829	chr15:33838947-33841829	0	+	33838947	33838947	8553170	3	11,59,30,	0,1877,2852,
#Partially deleted in new
chr15	33839644	33865324	chr15:33839644-33865324	0	+	33839644	33839644	8553170	16	141,59,172,87,201,131,43,128,61,147,135,157,65,101,52,194,	0,1180,2219,3843,5217,8646,13400,13910,14744,15121,18135,19930,20950,21433,24493,25486,
#Partially deleted in new
chr15	33840569	33841880	chr15:33840569-33841880	0	+	33840569	33840569	8553170	3	24,59,17,	0,255,1294,
#Partially deleted in new
chr15	33841967	33866077	chr15:33841967-33866077	0	+	33841967	33865226	789624	13	68,222,131,43,128,61,147,135,157,65,101,52,947,	0,2873,6323,11077,11587,12421,12798,15812,17607,18627,19110,22170,23163,
#Partially deleted in new
chr15	33844985	33847089	chr15:33844985-33847089	0	+	33844985	33844985	8553170	2	77,60,	0,2044,
#Partially deleted in new
chr15	33847115	33857855	chr15:33847115-33857855	0	+	33847115	33847115	8553170	7	116,131,43,128,61,147,76,	0,1175,5929,6439,7273,7650,10664,
#Partially deleted in new
chr15	33847570	33854417	chr15:33847570-33854417	0	+	33847570	33847570	8553170	5	43,131,43,128,29,	0,720,5474,5984,6818,
#Deleted in new
chr15	33850537	33851178	chr15:33850537-33851178	3	-	33850537	33850537	8553170	1	641,	0,
#Partially deleted in new
chr15	33851201	33866042	chr15:33851201-33866042	0	+	33851201	33851201	8553170	11	1355,43,128,61,147,135,157,65,101,52,912,	0,1843,2353,3187,3564,6578,8373,9393,9876,12936,13929,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	33851784	33856809	chr15:33851784-33856809	3	-	33851784	33851784	8553170	3	362,105,497,	0,3056,4528,
#Partially deleted in new
chr15	33852878	33857815	chr15:33852878-33857815	0	+	33852878	33852878	8553170	5	209,128,61,147,36,	0,676,1510,1887,4901,
#Deleted in new
chr15	33857885	33858149	chr15:33857885-33858149	0	+	33857885	33857885	8553170	2	29,71,	0,193,
#Partially deleted in new
chr15	33858138	33859669	chr15:33858138-33859669	0	+	33858138	33858138	8553170	2	54,95,	0,1436,
#Partially deleted in new
chr15	33858601	33864825	chr15:33858601-33864825	3	-	33858601	33858601	8553170	2	493,69,	0,6155,
#Partially deleted in new
chr15	33866226	34039176	chr15:33866226-34039176	3	-	33866612	34039046	789624	6	502,361,96,71,178,397,	0,1268,4708,9698,136805,172553,
#Partially deleted in new
chr15	33866706	33875994	chr15:33866706-33875994	0	-	33867578	33875994	789624	4	22,96,96,70,	0,788,4228,9218,
#Partially deleted in new
chr15	33867772	33885738	chr15:33867772-33885738	0	-	33867772	33867772	8553170	5	83,96,71,85,118,	0,3162,8152,15879,17848,
#Partially deleted in new
chr15	33968719	34062783	chr15:33968719-34062783	0	+	34062717	34062783	789624	2	431,141,	0,93923,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	33968887	34067457	chr15:33968887-34067457	3	+	34062717	34064316	789624	3	263,332,4815,	0,77652,93755,
#Deleted in new
chr15	33972058	33972515	chr15:33972058-33972515	3	-	33972058	33972058	8553170	1	457,	0,
#Deleted in new
chr15	33990685	33992048	chr15:33990685-33992048	7	+	33990685	33990685	16724991	2	680,523,	0,840,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	34018226	34065090	chr15:34018226-34065090	1	+	34062717	34064316	789624	2	239,2448,	0,44416,
#Partially deleted in new
chr15	34084016	34101948	chr15:34084016-34101948	3	-	34084333	34101839	0	5	470,81,139,120,345,	0,4036,6300,11878,17587,
#Partially deleted in new
chr15	34084329	34101807	chr15:34084329-34101807	0	-	34084333	34101807	789624	4	157,81,139,204,	0,3723,5987,17274,
#Partially deleted in new
chr15	34084363	34101807	chr15:34084363-34101807	0	-	34084363	34101781	789624	5	123,81,139,120,43,	0,3689,5953,11531,17401,
#Deleted in new
chr15	34085910	34086314	chr15:34085910-34086314	7	-	34085910	34085910	16724991	1	404,	0,
#Deleted in new
chr15	34100633	34101827	chr15:34100633-34101827	0	-	34100633	34100633	8553170	2	383,224,	0,970,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	34102072	34108684	chr15:34102072-34108684	3	+	34102531	34104289	789624	1	6612,	0,
#Partially deleted in new
chr15	34140673	34210079	chr15:34140673-34210079	3	-	34142338	34163676	789624	10	1698,94,90,90,51,119,280,41,131,129,	0,4724,6087,6526,6706,7958,12116,13970,22886,69277,
#Partially deleted in new
chr15	34141961	34153050	chr15:34141961-34153050	0	-	34142338	34153050	789624	4	410,94,119,261,	0,3436,6670,10828,
#Partially deleted in new
chr15	34142090	34145855	chr15:34142090-34145855	0	-	34142090	34142090	8553170	2	281,458,	0,3307,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	34142668	34147214	chr15:34142668-34147214	0	-	34142889	34147214	789624	4	356,94,90,15,	0,2729,4092,4531,
#Partially deleted in new
chr15	34144963	34148750	chr15:34144963-34148750	0	-	34145237	34148750	789624	6	289,94,90,90,51,119,	0,434,1797,2236,2416,3668,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	34146069	34210096	chr15:34146069-34210096	0	-	34146069	34146069	8553170	6	1220,51,119,41,131,146,	0,1310,2562,8574,17490,63881,
#Partially deleted in new
chr15	34146659	34210096	chr15:34146659-34210096	0	-	34146659	34146659	8553170	6	630,51,119,280,41,146,	0,720,1972,6130,7984,63291,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	34147202	34154831	chr15:34147202-34154831	0	-	34147202	34147202	8553170	5	87,51,119,280,188,	0,177,1429,5587,7441,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	34147229	34154831	chr15:34147229-34154831	0	-	34147229	34152939	789624	6	60,51,119,280,41,46,	0,150,1402,5560,7414,7556,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	34148389	34210061	chr15:34148389-34210061	0	-	34148389	34148389	8553170	5	361,280,41,131,111,	0,4400,6254,15170,61561,
#Duplicated in new
chr15	34148542	34154831	chr15:34148542-34154831	0	-	34148542	34148542	8553170	4	208,280,41,46,	0,4247,6101,6243,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	34148652	34210011	chr15:34148652-34210011	0	-	34148652	34163676	789624	6	98,280,41,131,186,61,	0,4137,5991,14907,17277,61298,
#Partially deleted in new
chr15	34148655	34210096	chr15:34148655-34210096	0	-	34148655	34152939	789624	4	95,280,41,146,	0,4134,5988,61295,
#Partially deleted in new
chr15	34148657	34210079	chr15:34148657-34210079	0	-	34148657	34163676	789624	6	93,280,41,131,179,129,	0,4132,5986,14902,29163,61293,
#Partially deleted in new
chr15	34153004	34210077	chr15:34153004-34210077	0	-	34153004	34163676	789624	5	65,41,131,72,127,	0,1639,10555,45255,56946,
#Deleted in new
chr15	34208516	34210069	chr15:34208516-34210069	0	-	34208516	34208516	8553170	1	1553,	0,
#Partially deleted in new
chr15	34224998	34230156	chr15:34224998-34230156	3	+	34225114	34229788	789624	5	202,115,154,161,404,	0,537,2694,3430,4754,
#Partially deleted in new
chr15	34225012	34230147	chr15:34225012-34230147	1	+	34225114	34229847	789624	4	188,115,154,395,	0,523,2680,4740,
#Partially deleted in new
chr15	34225017	34228583	chr15:34225017-34228583	0	+	34225114	34227738	789624	4	183,87,154,155,	0,546,2675,3411,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	34225018	34226554	chr15:34225018-34226554	0	+	34225018	34225018	8553170	2	182,1019,	0,517,
#Partially deleted in new
chr15	34225024	34227846	chr15:34225024-34227846	0	+	34225114	34227846	789624	3	176,136,154,	0,490,2668,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	34225035	34229182	chr15:34225035-34229182	1	+	34225114	34228971	789624	4	165,115,102,217,	0,500,2657,3930,
#Partially deleted in new
chr15	34225036	34230156	chr15:34225036-34230156	0	+	34225114	34227738	789624	5	164,123,154,161,404,	0,499,2656,3392,4716,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	34225037	34228841	chr15:34225037-34228841	1	+	34225114	34228128	789624	3	163,123,723,	0,498,3081,
#Partially deleted in new
chr15	34225039	34229980	chr15:34225039-34229980	0	+	34225114	34227738	789624	3	161,154,228,	0,2653,4713,
#Partially deleted in new
chr15	34225065	34229999	chr15:34225065-34229999	1	+	34225114	34229788	789624	3	135,115,247,	0,470,4687,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	34225161	34228190	chr15:34225161-34228190	0	+	34225161	34225161	8553170	3	39,115,498,	0,374,2531,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	34226511	34230149	chr15:34226511-34230149	0	+	34226511	34226511	8553170	2	1313,706,	0,2932,
#Partially deleted in new
chr15	34227694	34230156	chr15:34227694-34230156	0	+	34227694	34228579	789624	3	152,153,404,	0,742,2058,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr15	34229995	34318779	chr15:34229995-34318779	3	-	34233880	34318678	789624	25	3977,134,185,108,132,170,196,169,105,120,99,119,175,58,99,159,215,242,131,55,147,132,95,45,219,	0,5185,6019,6712,7423,8236,8969,10665,11237,12106,13978,15289,15697,20302,20635,20903,22174,24352,25266,26233,27646,28817,30930,45349,88565,
#Partially deleted in new
chr15	34233258	34337752	chr15:34233258-34337752	1	-	34233880	34336680	789624	26	714,134,185,108,132,170,196,169,105,120,99,119,175,58,99,159,215,242,131,55,147,132,95,45,343,421,	0,1922,2756,3449,4160,4973,5706,7402,7974,8843,10715,12026,12434,17039,17372,17640,18911,21089,22003,22970,24383,25554,27667,42086,103151,104073,
#Partially deleted in new
chr15	34233258	34338060	chr15:34233258-34338060	1	-	34233880	34336503	789624	26	714,134,185,108,132,170,196,169,105,120,99,119,175,58,99,159,215,242,131,55,147,132,95,45,192,100,	0,1922,2756,3449,4160,4973,5706,7402,7974,8843,10715,12026,12434,17039,17372,17640,18911,21089,22003,22970,24383,25554,27667,42086,103151,104702,
#Partially deleted in new
chr15	34233258	34336844	chr15:34233258-34336844	1	-	34233880	34336680	789624	24	714,134,185,108,132,170,196,169,105,120,99,119,175,58,99,159,215,242,131,55,147,132,95,435,	0,1922,2756,3449,4160,4973,5706,7402,7974,8843,10715,12026,12434,17039,17372,17640,18911,21089,22003,22970,24383,25554,27667,103151,
#Partially deleted in new
chr15	34233258	34337760	chr15:34233258-34337760	1	-	34233880	34336503	789624	26	714,134,185,108,132,170,196,169,105,120,99,119,175,58,99,159,215,242,131,55,147,132,95,45,192,429,	0,1922,2756,3449,4160,4973,5706,7402,7974,8843,10715,12026,12434,17039,17372,17640,18911,21089,22003,22970,24383,25554,27667,42086,103151,104073,
#Partially deleted in new
chr15	34233258	34337760	chr15:34233258-34337760	0	-	34236772	34336503	789624	26	714,134,185,108,161,170,196,169,105,120,99,119,175,58,99,159,215,242,131,55,147,132,95,45,192,429,	0,1922,2756,3449,4131,4973,5706,7402,7974,8843,10715,12026,12434,17039,17372,17640,18911,21089,22003,22970,24383,25554,27667,42086,103151,104073,
#Partially deleted in new
chr15	34233258	34337786	chr15:34233258-34337786	0	-	34238242	34336680	789624	25	714,134,185,108,132,100,196,169,105,120,99,119,175,58,99,159,215,242,131,55,147,132,95,45,1377,	0,1922,2756,3449,4160,4973,5706,7402,7974,8843,10715,12026,12434,17039,17372,17640,18911,21089,22003,22970,24383,25554,27667,42086,103151,
#Partially deleted in new
chr15	34233258	34336844	chr15:34233258-34336844	1	-	34233880	34336680	789624	25	714,134,185,108,132,170,196,169,105,120,99,119,175,58,99,159,215,242,131,55,147,132,95,45,435,	0,1922,2756,3449,4160,4973,5706,7402,7974,8843,10715,12026,12434,17039,17372,17640,18911,21089,22003,22970,24383,25554,27667,42086,103151,
#Partially deleted in new
chr15	34233261	34299658	chr15:34233261-34299658	1	-	34233880	34258938	789624	24	711,134,185,108,132,170,196,169,105,120,99,119,175,58,99,159,215,242,131,55,132,95,45,90,	0,1919,2753,3446,4157,4970,5703,7399,7971,8840,10712,12023,12431,17036,17369,17637,18908,21086,22000,22967,25551,27664,42083,66307,
#Partially deleted in new
chr15	34233262	34338057	chr15:34233262-34338057	0	-	34238242	34336680	789624	25	710,134,185,108,161,100,196,169,105,120,99,119,175,58,99,159,215,242,131,55,147,132,95,45,1648,	0,1918,2752,3445,4127,4969,5702,7398,7970,8839,10711,12022,12430,17035,17368,17636,18907,21085,21999,22966,24379,25550,27663,42082,103147,
#Partially deleted in new
chr15	34233711	34338057	chr15:34233711-34338057	1	-	34233880	34336680	789624	26	261,134,185,108,132,170,196,169,105,120,99,119,175,58,99,159,215,242,131,55,147,132,95,45,277,97,	0,1469,2303,2996,3707,4520,5253,6949,7521,8390,10262,11573,11981,16586,16919,17187,18458,20636,21550,22517,23930,25101,27214,41633,102698,104249,
#Partially deleted in new
chr15	34233880	34337757	chr15:34233880-34337757	1	-	34233880	34336653	789624	26	92,134,185,108,132,170,196,169,105,120,99,119,175,58,99,159,215,242,131,55,147,132,95,45,258,426,	0,1300,2134,2827,3538,4351,5084,6780,7352,8221,10093,11404,11812,16417,16750,17018,18289,20467,21381,22348,23761,24932,27045,41464,102529,103451,
#Deleted in new
chr15	34237083	34238396	chr15:34237083-34238396	0	-	34237083	34237083	8553170	2	467,165,	0,1148,
#Deleted in new
chr15	34237480	34238710	chr15:34237480-34238710	0	-	34237480	34237480	8553170	2	70,479,	0,751,
#Partially deleted in new
chr15	34238231	34241044	chr15:34238231-34241044	0	-	34238231	34238231	8553170	3	170,196,384,	0,733,2429,
#Partially deleted in new
chr15	34241062	34245340	chr15:34241062-34245340	0	-	34241062	34241062	8553170	4	275,120,99,56,	0,1039,2911,4222,
#Partially deleted in new
chr15	34255285	34257832	chr15:34255285-34257832	3	+	34255285	34255285	8553170	2	126,261,	0,2286,
#Partially deleted in new
chr15	34256235	34299636	chr15:34256235-34299636	0	-	34256235	34258938	789624	5	48,147,132,95,68,	0,1406,2577,4690,43333,
#Partially deleted in new
chr15	34258872	34338057	chr15:34258872-34338057	0	-	34258872	34336653	789624	5	72,95,45,258,97,	0,2053,16472,77537,79088,
#Partially deleted in new
chr15	34260929	34338057	chr15:34260929-34338057	0	-	34260929	34336680	789624	4	91,45,343,97,	0,14415,75480,77031,
#Partially deleted in new
chr15	34260977	34337742	chr15:34260977-34337742	0	-	34260977	34336503	789624	4	43,45,192,268,	0,14367,75432,76497,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	34314727	34314828	chr15:34314727-34314828	3	+	34314727	34314727	8553170	1	101,	0,
#Partially deleted in new
chr15	34341712	34343177	chr15:34341712-34343177	3	-	34341967	34343073	789624	2	396,158,	0,1307,
#Partially deleted in new
chr15	34341718	34343123	chr15:34341718-34343123	1	-	34341993	34343073	789624	2	332,104,	0,1301,
#Partially deleted in new
chr15	34343314	34357728	chr15:34343314-34357728	1	+	34343696	34357491	789624	8	388,94,709,129,137,287,117,2241,	0,2627,4654,7389,10421,11131,11706,12173,
#Partially deleted in new
chr15	34343314	34357737	chr15:34343314-34357737	3	+	34346019	34357491	789624	8	388,179,709,129,137,287,117,2250,	0,2542,4654,7389,10421,11131,11706,12173,
#Partially deleted in new
chr15	34343409	34357737	chr15:34343409-34357737	1	+	34343632	34357491	789624	7	293,709,129,137,287,117,2250,	0,4559,7294,10326,11036,11611,12078,
#Partially deleted in new
chr15	34345864	34357732	chr15:34345864-34357732	1	+	34346019	34357491	789624	7	171,709,129,137,287,117,2245,	0,2104,4839,7871,8581,9156,9623,
#Partially deleted in new
chr15	34358617	34367278	chr15:34358617-34367278	3	-	34359126	34367100	789624	14	685,157,99,133,126,83,55,35,59,61,113,221,143,292,	0,971,1493,2782,3578,3955,4164,4804,5043,5395,5576,6390,6941,8369,
#Partially deleted in new
chr15	34358908	34362655	chr15:34358908-34362655	0	-	34358908	34358908	8553170	5	394,621,133,126,83,	0,680,2491,3287,3664,
#Partially deleted in new
chr15	34358925	34367045	chr15:34358925-34367045	1	-	34359126	34364267	789624	15	377,157,99,133,126,83,55,35,59,60,31,81,221,143,59,	0,663,1185,2474,3270,3647,3856,4496,4735,5087,5268,5300,6082,6633,8061,
#Partially deleted in new
chr15	34359095	34362655	chr15:34359095-34362655	0	-	34360163	34362655	789624	5	207,157,99,126,83,	0,493,1015,3100,3477,
#Partially deleted in new
chr15	34360911	34362890	chr15:34360911-34362890	0	-	34360911	34360911	8553170	4	621,126,83,109,	0,1284,1661,1870,
#Deleted in new
chr15	34362578	34363740	chr15:34362578-34363740	0	-	34362578	34362578	8553170	2	258,319,	0,843,
#Partially deleted in new
chr15	34363945	34367176	chr15:34363945-34367176	0	-	34363945	34363945	8553170	4	361,221,143,190,	0,1062,1613,3041,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	34364606	34365955	chr15:34364606-34365955	0	-	34364606	34364606	8553170	1	1349,	0,
#Deleted in new
chr15	34365007	34365994	chr15:34365007-34365994	0	-	34365007	34365007	8553170	2	221,436,	0,551,
#Deleted in new
chr15	34365098	34366981	chr15:34365098-34366981	0	-	34365098	34365098	8553170	3	130,143,68,	0,460,1815,
#Deleted in new
chr15	34373540	34374603	chr15:34373540-34374603	7	-	34373540	34373540	16724991	1	1063,	0,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr15	34379067	34407687	chr15:34379067-34407687	0	-	34379067	34379067	789624	23	2546,156,101,101,144,257,88,108,87,110,85,48,39,1328,125,143,74,96,49,48,139,197,164,	0,2633,2900,3083,3318,3729,4373,4678,4893,5980,6186,6359,6672,7557,10576,12055,12285,19566,20087,21644,25849,27606,28456,
#Deleted in new
chr15	34379070	34387380	chr15:34379070-34387380	1	-	34381410	34387039	789624	15	2543,156,101,101,144,257,88,108,87,110,85,48,39,287,423,	0,2630,2897,3080,3315,3726,4370,4675,4890,5977,6183,6356,6669,7554,7887,
#Partially deleted in new
chr15	34381410	34389756	chr15:34381410-34389756	3	-	34381410	34389691	789624	16	203,156,101,101,144,257,88,108,87,110,85,48,39,117,120,113,	0,290,557,740,975,1386,2030,2335,2550,3637,3843,4016,4329,5214,6422,8233,
#Deleted in new
chr15	34382068	34382150	chr15:34382068-34382150	3	-	34382068	34382068	5263520	1	82,	0,
#Deleted in new
chr15	34394593	34394931	chr15:34394593-34394931	7	+	34394593	34394593	16724991	1	338,	0,
#Partially deleted in new
chr15	34404969	34437466	chr15:34404969-34437466	0	-	34404969	34404969	8553170	5	86,197,212,89,69,	0,1704,2554,30413,32428,
#Partially deleted in new
chr15	34406676	34428925	chr15:34406676-34428925	0	-	34406676	34406676	8553170	3	194,160,311,	0,899,21938,
#Deleted in new
chr15	34409624	34410594	chr15:34409624-34410594	7	+	34409624	34409624	16724991	1	970,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	34415449	34420273	chr15:34415449-34420273	3	-	34415449	34415449	8553170	1	4824,	0,
#Deleted in new
chr15	34489001	34490571	chr15:34489001-34490571	7	-	34489001	34489001	16724991	1	1570,	0,
#Deleted in new
chr15	34494419	34495900	chr15:34494419-34495900	7	+	34494419	34494419	16724991	1	1481,	0,
#Partially deleted in new
chr15	34520607	34521791	chr15:34520607-34521791	7	+	34520607	34520607	16724991	2	180,268,	0,916,
#Partially deleted in new
chr15	34525206	34536010	chr15:34525206-34536010	3	-	34527631	34535912	789624	16	2628,156,101,101,144,257,88,108,87,110,85,48,39,117,120,146,	0,2715,2982,3165,3400,3811,4455,4760,4975,6062,6268,6441,6754,7639,8847,10658,
#Deleted in new
chr15	34525281	34533260	chr15:34525281-34533260	1	-	34527631	34533260	789624	15	2553,156,101,101,144,257,88,108,87,110,85,48,39,300,75,	0,2640,2907,3090,3325,3736,4380,4685,4900,5987,6193,6366,6679,7564,7904,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr15	34525281	34588503	chr15:34525281-34588503	0	-	34525281	34525281	789624	23	2553,156,101,101,144,257,88,108,87,110,85,48,39,1328,125,304,96,49,48,139,197,212,113,	0,2640,2907,3090,3325,3736,4380,4685,4900,5987,6193,6366,6679,7564,10583,12062,19576,20096,21653,25856,27613,28463,63109,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr15	34525653	34582860	chr15:34525653-34582860	0	-	34525653	34525653	8553170	23	2181,156,101,101,144,257,88,108,87,110,85,48,39,1328,125,304,96,49,48,139,197,212,111,	0,2268,2535,2718,2953,3364,4008,4313,4528,5615,5821,5994,6307,7192,10211,11690,19204,19724,21281,25484,27241,28091,57096,
#Deleted in new
chr15	34526958	34532976	chr15:34526958-34532976	0	-	34526958	34526958	8553170	14	876,153,101,101,144,257,88,108,87,110,85,48,39,131,	0,966,1230,1413,1648,2059,2703,3008,3223,4310,4516,4689,5002,5887,
#Deleted in new
chr15	34528289	34528371	chr15:34528289-34528371	3	-	34528289	34528289	5263520	1	82,	0,
#Partially deleted in new
chr15	34544857	34552398	chr15:34544857-34552398	0	-	34544857	34544857	8553170	5	96,49,48,139,131,	0,520,2077,6280,7410,
#Partially deleted in new
chr15	34545387	34583651	chr15:34545387-34583651	0	-	34545387	34545387	8553170	5	39,48,139,212,136,	0,1547,5750,8357,38128,
#Partially deleted in new
chr15	34551190	34581499	chr15:34551190-34581499	0	-	34551190	34551190	8553170	4	86,197,212,34,	0,1704,2554,30275,
#Partially deleted in new
chr15	34552906	34583651	chr15:34552906-34583651	0	-	34552906	34552906	8553170	3	185,212,136,	0,838,30609,
#Partially deleted in new
chr15	34552972	34583634	chr15:34552972-34583634	0	-	34552972	34552972	8553170	4	119,212,90,119,	0,772,21852,30543,
#Deleted in new
chr15	34555869	34556820	chr15:34555869-34556820	7	+	34555869	34555869	16724991	1	951,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	34565889	34582860	chr15:34565889-34582860	0	-	34565889	34565889	8553170	2	584,111,	0,16860,
#Deleted in new
chr15	34597457	34597558	chr15:34597457-34597558	3	-	34597457	34597457	8553170	1	101,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	34651134	34655764	chr15:34651134-34655764	3	-	34651134	34651134	789624	4	128,93,120,146,	0,549,3163,4484,
#Deleted in new
chr15	34751031	34754965	chr15:34751031-34754965	3	-	34752477	34754488	0	2	2341,548,	0,3386,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	34755083	34812923	chr15:34755083-34812923	3	+	34755083	34755083	789624	3	138,161,2428,	0,22187,55412,
#Partially deleted in new
chr15	34755161	34790173	chr15:34755161-34790173	0	+	34755161	34755161	8553170	3	60,161,367,	0,22109,34645,
#Deleted in new
chr15	34788094	34795726	chr15:34788094-34795726	3	-	34790411	34794808	789624	7	2461,182,192,162,325,151,221,	0,3019,3995,4313,5150,6585,7411,
#Deleted in new
chr15	34790229	34794117	chr15:34790229-34794117	0	-	34790229	34790229	8553170	6	326,182,192,162,272,276,	0,884,1860,2178,3068,3612,
#Deleted in new
chr15	34790229	34794050	chr15:34790229-34794050	0	-	34790229	34790229	8553170	6	326,182,192,162,325,209,	0,884,1860,2178,3015,3612,
#Deleted in new
chr15	34791157	34792851	chr15:34791157-34792851	0	-	34791157	34791157	8553170	4	138,192,162,144,	0,932,1250,1550,
#Deleted in new
chr15	34791700	34792522	chr15:34791700-34792522	0	-	34791700	34791700	8553170	2	581,115,	0,707,
#Deleted in new
chr15	34792249	34794028	chr15:34792249-34794028	0	-	34792249	34792249	8553170	4	32,162,325,286,	0,158,995,1493,
#Deleted in new
chr15	34849136	34850395	chr15:34849136-34850395	7	-	34849136	34849136	16724991	1	1259,	0,
#Boundary problem: need 35, got 0, diff 35, mapped 0.0
chr15	34851781	34969839	chr15:34851781-34969839	3	-	34856791	34969613	0	35	5325,114,175,86,171,172,188,72,138,210,136,110,111,70,147,242,170,168,179,142,121,103,104,114,117,65,77,101,69,141,121,36,41,57,301,	0,8260,11085,15742,18970,22046,22895,24153,30720,32743,34744,38433,41881,45115,45777,48840,52554,54763,58353,63256,66476,68550,75253,78476,80536,82789,86955,89117,90230,92506,96482,101103,108992,112452,117757,
#Partially deleted in new
chr15	34856350	34969733	chr15:34856350-34969733	0	-	34904421	34969613	789624	34	756,114,175,86,171,1037,72,138,210,136,110,111,70,147,242,170,194,179,142,121,103,104,114,117,65,77,101,69,141,121,36,41,57,195,	0,3691,6516,11173,14401,17477,19584,26151,28174,30175,33864,37312,40546,41208,44271,47985,50168,53784,58687,61907,63981,70684,73907,75967,78220,82386,84548,85661,87937,91913,96534,104423,107883,113188,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	34856499	34870264	chr15:34856499-34870264	0	-	34856499	34856499	8553170	4	607,114,175,2741,	0,3542,6367,11024,
#Partially deleted in new
chr15	34856826	34863224	chr15:34856826-34863224	0	-	34856826	34856826	8553170	3	280,114,358,	0,3215,6040,
#Partially deleted in new
chr15	34943079	34943394	chr15:34943079-34943394	7	+	34943079	34943079	16724991	1	315,	0,
#Partially deleted in new
chr15	34944303	34964453	chr15:34944303-34964453	0	-	34944303	34964452	789624	5	125,121,36,41,220,	0,3960,8581,16470,19930,
#Partially deleted in new
chr15	34948133	34964402	chr15:34948133-34964402	0	-	34948133	34948133	8553170	4	251,36,41,169,	0,4751,12640,16100,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	34978340	34988287	chr15:34978340-34988287	3	-	34981358	34983434	789624	3	5150,117,172,	0,9216,9775,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	34978350	34980084	chr15:34978350-34980084	3	+	34978350	34978350	8553170	1	1734,	0,
#Partially deleted in new
chr15	34983037	34988225	chr15:34983037-34988225	0	-	34983037	34983434	789624	2	453,110,	0,5078,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	34993645	35003221	chr15:34993645-35003221	3	+	34993645	34993645	8553170	2	377,96,	0,9480,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	34999901	35000270	chr15:34999901-35000270	3	+	34999901	34999901	8553170	1	369,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	35008468	35011191	chr15:35008468-35011191	3	+	35008468	35008468	8553170	2	30,447,	0,2276,
#Deleted in new
chr15	35081143	35081513	chr15:35081143-35081513	7	+	35081143	35081143	16724991	1	370,	0,
#Partially deleted in new
chr15	35084192	35085110	chr15:35084192-35085110	3	-	35084192	35085110	789624	1	918,	0,
#Partially deleted in new
chr15	35084192	35085110	chr15:35084192-35085110	1	-	35084192	35085110	789624	2	369,501,	0,417,
#Deleted in new
chr15	35092480	35093210	chr15:35092480-35093210	7	+	35092480	35092480	16724991	1	730,	0,
#Partially deleted in new
chr15	35099021	35169698	chr15:35099021-35169698	3	-	35099021	35099021	8553170	2	1268,74,	0,70603,
#Deleted in new
chr15	35121572	35122084	chr15:35121572-35122084	7	-	35121572	35121572	16724991	1	512,	0,
#Partially deleted in new
chr15	35181798	35238197	chr15:35181798-35238197	7	+	35181798	35181798	16724991	2	26,1048,	0,55351,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	35217344	35410851	chr15:35217344-35410851	0	-	35217344	35217344	8553170	4	3238,88,95,17,	0,156176,164477,193490,
#Deleted in new
chr15	35237325	35238062	chr15:35237325-35238062	5	+	35237325	35237325	16724991	1	737,	0,
#Deleted in new
chr15	35282595	35282980	chr15:35282595-35282980	7	+	35282595	35282595	16724991	1	385,	0,
#Deleted in new
chr15	35298248	35299440	chr15:35298248-35299440	7	-	35298248	35298248	16724991	1	1192,	0,
#Partially deleted in new
chr15	35330800	35410858	chr15:35330800-35410858	0	-	35330800	35330800	8553170	4	277,88,95,24,	0,42720,51021,80034,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	35370881	35546168	chr15:35370881-35546168	3	-	35372149	35546141	789624	9	1322,88,95,62,119,74,194,95,50,	0,2639,10940,39953,79803,83865,167392,171531,175237,
#Partially deleted in new
chr15	35372106	35454760	chr15:35372106-35454760	0	-	35372106	35454760	789624	6	87,88,95,62,119,14,	0,1414,9715,38728,78578,82640,
#Partially deleted in new
chr15	35372255	35372364	chr15:35372255-35372364	3	-	35372255	35372255	5263520	1	109,	0,
#Partially deleted in new
chr15	35381831	35546165	chr15:35381831-35546165	0	-	35381831	35538441	789624	6	85,62,119,74,194,47,	0,29003,68853,72915,156442,164287,
#Partially deleted in new
chr15	35381834	35542491	chr15:35381834-35542491	0	-	35381834	35381834	8553170	5	82,62,74,194,79,	0,29000,72912,156439,160578,
#Partially deleted in new
chr15	35396220	35396444	chr15:35396220-35396444	7	+	35396220	35396220	16724991	1	224,	0,
#Partially deleted in new
chr15	35400690	35401768	chr15:35400690-35401768	7	+	35400690	35400690	16724991	1	1078,	0,
#Partially deleted in new
chr15	35489968	35546153	chr15:35489968-35546153	0	-	35489968	35489968	8553170	4	229,194,95,35,	0,48305,52444,56150,
#Partially deleted in new
chr15	35518993	35546192	chr15:35518993-35546192	1	-	35522092	35546141	789624	4	3285,194,95,74,	0,19280,23419,27125,
#Partially deleted in new
chr15	35538081	35546193	chr15:35538081-35546193	0	-	35538081	35538081	8553170	3	386,95,75,	0,4331,8037,
#Partially deleted in new
chr15	35546194	35859001	chr15:35546194-35859001	3	+	35546194	35546194	789624	3	279,183,1015,	0,165512,311792,
#Partially deleted in new
chr15	35546382	35858303	chr15:35546382-35858303	0	+	35546382	35546382	8553170	3	91,85,317,	0,165324,311604,
#Deleted in new
chr15	35774800	35774950	chr15:35774800-35774950	7	+	35774800	35774800	16724991	1	150,	0,
#Deleted in new
chr15	35926855	35926923	chr15:35926855-35926923	3	+	35926855	35926855	5263520	1	68,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	35939166	35974769	chr15:35939166-35974769	1	-	35939166	35939166	8553170	3	549,44,59,	0,25861,35544,
#Partially deleted in new
chr15	36046081	36049529	chr15:36046081-36049529	3	+	36046081	36046081	8553170	2	204,428,	0,3020,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	36341738	36344166	chr15:36341738-36344166	3	+	36341738	36341738	8553170	1	2428,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	36438971	36444512	chr15:36438971-36444512	1	-	36438971	36438971	8553170	2	2723,319,	0,5222,
#Partially deleted in new
chr15	36441617	36460449	chr15:36441617-36460449	0	-	36441617	36441617	8553170	3	77,99,122,	0,2576,18710,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	36443536	36471016	chr15:36443536-36471016	3	-	36443536	36443536	8553170	4	297,99,37,168,	0,657,25342,27312,
#Deleted in new
chr15	36571984	36572212	chr15:36571984-36572212	7	+	36571984	36571984	16724991	1	228,	0,
#Partially deleted in new
chr15	36579610	36810223	chr15:36579610-36810223	3	+	36579860	36808453	789624	11	351,46,65,61,73,80,50,68,66,106,1900,	0,64667,65612,74487,78222,112074,112515,117712,129612,130245,228713,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	36579633	36747241	chr15:36579633-36747241	1	+	36579860	36747079	789624	11	328,46,65,61,73,80,50,68,66,106,307,	0,64644,65589,74464,78199,112051,112492,117689,129589,130222,167301,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	36579637	36648757	chr15:36579637-36648757	0	+	36579637	36579637	8553170	5	324,46,65,90,140,	0,64640,65585,67931,68980,
#Partially deleted in new
chr15	36579641	36691754	chr15:36579641-36691754	0	+	36579860	36691754	789624	4	320,61,73,70,	0,74456,78191,112043,
#Partially deleted in new
chr15	36579644	36810050	chr15:36579644-36810050	1	+	36579860	36808453	789624	11	317,46,65,61,73,80,50,68,66,124,1727,	0,64633,65578,74453,78188,112040,112481,117678,129578,130193,228679,
#Partially deleted in new
chr15	36579644	36810248	chr15:36579644-36810248	1	+	36579860	36808453	789624	11	317,46,65,61,73,80,50,68,66,106,1925,	0,64633,65578,74453,78188,112040,112481,117678,129578,130211,228679,
#Partially deleted in new
chr15	36579651	36809950	chr15:36579651-36809950	0	+	36579860	36654105	789624	10	310,65,61,73,80,50,68,66,106,1627,	0,65571,74446,78181,112033,112474,117671,129571,130204,228672,
#Partially deleted in new
chr15	36579686	36668148	chr15:36579686-36668148	0	+	36579686	36579686	8553170	6	275,46,65,61,73,38,	0,64591,65536,74411,78146,88424,
#Partially deleted in new
chr15	36579709	36810157	chr15:36579709-36810157	1	+	36579860	36808340	789624	10	252,46,65,61,73,80,50,68,66,1834,	0,64568,65513,74388,78123,111975,112416,117613,129513,228614,
#Partially deleted in new
chr15	36579766	36657873	chr15:36579766-36657873	0	+	36579860	36591810	789624	6	195,114,46,65,61,41,	0,12016,64511,65456,74331,78066,
#Partially deleted in new
chr15	36579782	36810046	chr15:36579782-36810046	0	+	36579860	36691706	789624	13	179,46,65,61,73,34,80,50,68,66,106,166,1143,	0,64495,65440,74315,78050,78478,111902,112343,117540,129440,130073,228541,229121,
#Partially deleted in new
chr15	36579843	36810244	chr15:36579843-36810244	1	+	36579860	36808453	789624	12	118,46,65,61,73,80,50,68,66,106,166,1341,	0,64434,65379,74254,77989,111841,112282,117479,129379,130012,228480,229060,
#Partially deleted in new
chr15	36594868	36709906	chr15:36594868-36709906	0	+	36657853	36709906	789624	9	50,65,61,73,80,50,68,66,51,	0,50354,59229,62964,96816,97257,102454,114354,114987,
#Partially deleted in new
chr15	36594876	36810069	chr15:36594876-36810069	1	+	36691707	36808453	789624	12	42,46,65,61,73,109,80,50,68,66,106,1746,	0,49401,50346,59221,62956,73234,96808,97249,102446,114346,114979,213447,
#Partially deleted in new
chr15	36594893	36810246	chr15:36594893-36810246	1	+	36657853	36808453	789624	12	25,55,46,65,61,73,80,50,68,66,106,1923,	0,45711,49384,50329,59204,62939,96791,97232,102429,114329,114962,213430,
#Partially deleted in new
chr15	36594899	36808453	chr15:36594899-36808453	1	+	36657853	36808453	789624	11	19,46,65,61,73,80,50,68,66,106,130,	0,49378,50323,59198,62933,96785,97226,102423,114323,114956,213424,
#Deleted in new
chr15	36613473	36614198	chr15:36613473-36614198	7	+	36613473	36613473	16724991	1	725,	0,
#Deleted in new
chr15	36617088	36619265	chr15:36617088-36619265	7	+	36617088	36617088	16724991	1	2177,	0,
#Deleted in new
chr15	36626673	36627775	chr15:36626673-36627775	7	-	36626673	36626673	16724991	1	1102,	0,
#Partially deleted in new
chr15	36640604	36810231	chr15:36640604-36810231	1	+	36657853	36808453	789624	11	55,46,65,61,73,80,50,68,66,106,1908,	0,3673,4618,13493,17228,51080,51521,56718,68618,69251,167719,
#Partially deleted in new
chr15	36641185	36669097	chr15:36641185-36669097	3	-	36641185	36641185	8553170	3	319,125,121,	0,650,27791,
#Partially deleted in new
chr15	36645282	36658336	chr15:36645282-36658336	0	+	36645282	36645282	8553170	4	5,61,73,76,	0,8815,12550,12978,
#Partially deleted in new
chr15	36696406	36810248	chr15:36696406-36810248	0	+	36696406	36696406	8553170	6	104,68,66,106,166,1345,	0,916,12816,13449,111917,112497,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	36702008	36808781	chr15:36702008-36808781	1	+	36702077	36808453	789624	4	85,66,106,458,	0,7214,7847,106315,
#Partially deleted in new
chr15	36702049	36808457	chr15:36702049-36808457	0	+	36702049	36702049	8553170	5	75,66,106,151,134,	0,7173,7806,88158,106274,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	36704312	36809498	chr15:36704312-36809498	0	+	36704312	36704312	8553170	4	4976,106,166,595,	0,5543,104011,104591,
#Partially deleted in new
chr15	36755944	36809347	chr15:36755944-36809347	0	+	36755944	36755944	8553170	3	162,166,444,	0,52379,52959,
#Partially deleted in new
chr15	36798595	36818459	chr15:36798595-36818459	7	-	36798595	36798595	16724991	4	1233,69,112,733,	0,5982,18581,19131,
#Deleted in new
chr15	36817132	36818113	chr15:36817132-36818113	5	-	36817132	36817132	16724991	1	981,	0,
#Deleted in new
chr15	36817175	36818113	chr15:36817175-36818113	4	-	36817175	36817175	16724991	2	113,178,	0,760,
#Deleted in new
chr15	36852639	36852859	chr15:36852639-36852859	3	+	36852639	36852639	8553170	1	220,	0,
#Deleted in new
chr15	36876378	36886533	chr15:36876378-36886533	3	-	36876378	36876378	8553170	4	78,172,203,113,	0,5118,5951,10042,
#Deleted in new
chr15	36879761	36881667	chr15:36879761-36881667	1	-	36879761	36879761	8553170	3	102,144,171,	0,234,1735,
#Deleted in new
chr15	36881017	36887035	chr15:36881017-36887035	0	-	36881017	36881017	8553170	2	651,99,	0,5919,
#Partially deleted in new
chr15	36889203	37101205	chr15:36889203-37101205	1	-	36892172	37099466	0	13	3256,90,59,77,146,115,150,51,51,142,233,145,314,	0,5947,7424,61120,147610,194567,204377,205323,206360,207085,208763,210251,211688,
#Partially deleted in new
chr15	36889203	37099885	chr15:36889203-37099885	3	-	36892172	37099466	0	12	3256,111,59,77,146,115,150,51,51,142,233,431,	0,5947,7424,61120,147610,194567,204377,205323,206360,207085,208763,210251,
#Partially deleted in new
chr15	36891020	37098321	chr15:36891020-37098321	1	-	36894753	37097970	0	12	1439,96,90,59,77,146,115,150,51,51,119,355,	0,3696,4130,5607,59303,145793,192750,202560,203506,204543,205268,206946,
#Partially deleted in new
chr15	36891021	37101299	chr15:36891021-37101299	1	-	36894753	37098172	0	13	1438,96,90,59,77,146,115,150,51,51,142,233,408,	0,3695,4129,5606,59302,145792,192749,202559,203505,204542,205267,206945,209870,
#Deleted in new
chr15	36891031	36898339	chr15:36891031-36898339	0	-	36891031	36891031	8553170	3	1428,86,1716,	0,4119,5592,
#Partially deleted in new
chr15	36891084	37099721	chr15:36891084-37099721	0	-	36896677	37099466	0	12	1375,96,90,59,146,115,150,51,51,142,233,267,	0,3632,4066,5543,145729,192686,202496,203442,204479,205204,206882,208370,
#Partially deleted in new
chr15	36891255	37098302	chr15:36891255-37098302	1	-	36894753	37098172	0	12	1204,96,111,59,77,146,115,150,51,51,142,336,	0,3461,3895,5372,59068,145558,192515,202325,203271,204308,205033,206711,
#Partially deleted in new
chr15	36891255	37099482	chr15:36891255-37099482	0	-	37094576	37099466	789624	12	1204,96,111,59,77,146,115,150,51,51,233,28,	0,3461,3895,5372,59068,145558,192515,202325,203271,204308,206711,208199,
#Partially deleted in new
chr15	36891409	37099306	chr15:36891409-37099306	1	-	36894753	37098172	0	13	1050,96,90,59,77,146,115,150,51,51,142,233,406,	0,3307,3741,5218,58914,145404,192361,202171,203117,204154,204879,206557,207491,
#Partially deleted in new
chr15	36891847	37099396	chr15:36891847-37099396	1	-	36894753	37097970	0	13	612,96,90,59,77,146,115,150,51,51,119,233,496,	0,2869,3303,4780,58476,144966,191923,201733,202679,203716,204441,206119,207053,
#Partially deleted in new
chr15	36891849	37100530	chr15:36891849-37100530	1	-	36894753	37099466	0	13	610,96,111,59,77,146,115,150,51,51,142,233,1076,	0,2867,3301,4778,58474,144964,191921,201731,202677,203714,204439,206117,207605,
#Deleted in new
chr15	36892055	36895287	chr15:36892055-36895287	0	-	36892055	36892055	8553170	2	404,137,	0,3095,
#Deleted in new
chr15	36892129	36895278	chr15:36892129-36895278	0	-	36892129	36892129	8553170	3	330,96,128,	0,2587,3021,
#Deleted in new
chr15	36892218	36898435	chr15:36892218-36898435	0	-	36892218	36892218	8553170	5	241,96,90,59,72,	0,2498,2932,4409,6145,
#Deleted in new
chr15	36892435	36897076	chr15:36892435-36897076	0	-	36892435	36892435	8553170	4	24,96,90,357,	0,2281,2715,4284,
#Deleted in new
chr15	36894417	36895302	chr15:36894417-36895302	0	-	36894417	36894417	8553170	2	395,152,	0,733,
#Deleted in new
chr15	36894706	36897150	chr15:36894706-36897150	0	-	36894706	36894706	8553170	3	106,111,523,	0,444,1921,
#Partially deleted in new
chr15	36894751	37099721	chr15:36894751-37099721	1	-	36894753	37099466	0	12	61,90,59,77,146,115,150,51,51,142,233,267,	0,399,1876,55572,142062,189019,198829,199775,200812,201537,203215,204703,
#Partially deleted in new
chr15	36894783	36904067	chr15:36894783-36904067	0	-	36894783	36894783	8553170	7	29,90,59,57,42,157,127,	0,367,1844,3580,3943,6216,9157,
#Partially deleted in new
chr15	36895148	37095021	chr15:36895148-37095021	0	-	36895148	37095021	789624	8	92,59,77,146,115,150,51,15,	0,1479,55175,141665,188622,198432,199378,199858,
#Deleted in new
chr15	36972820	36972901	chr15:36972820-36972901	3	-	36972820	36972820	5263520	1	81,	0,
#Partially deleted in new
chr15	37036390	37098531	chr15:37036390-37098531	0	-	37036390	37036390	8553170	7	569,115,150,51,51,142,565,	0,47380,57190,58136,59173,59898,61576,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	37050827	37050930	chr15:37050827-37050930	3	-	37050827	37050827	8553170	1	103,	0,
#Partially deleted in new
chr15	37066296	37094565	chr15:37066296-37094565	0	-	37066421	37094565	789624	4	241,115,150,39,	0,17474,27284,28230,
#Deleted in new
chr15	37083769	37094029	chr15:37083769-37094029	0	-	37083769	37083769	8553170	2	116,449,	0,9811,
#Deleted in new
chr15	37083771	37097367	chr15:37083771-37097367	0	-	37083771	37094577	789624	6	114,150,51,51,142,97,	0,9809,10755,11792,12517,13499,
#Deleted in new
chr15	37083789	37101279	chr15:37083789-37101279	0	-	37083789	37097970	789624	7	96,150,51,51,119,233,388,	0,9791,10737,11774,12499,14177,17102,
#Deleted in new
chr15	37083803	37096506	chr15:37083803-37096506	0	-	37083803	37094577	789624	5	82,150,51,51,218,	0,9777,10723,11760,12485,
#Deleted in new
chr15	37094515	37096191	chr15:37094515-37096191	0	-	37094515	37094515	8553170	3	62,51,439,	0,1048,1237,
#Deleted in new
chr15	37099338	37100173	chr15:37099338-37100173	3	+	37099338	37099338	8553170	2	91,373,	0,462,
#Deleted in new
chr15	37109586	37109984	chr15:37109586-37109984	3	+	37109586	37109586	8553170	1	398,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	37253878	37254952	chr15:37253878-37254952	7	+	37253878	37253878	16724991	1	1074,	0,
#Partially deleted in new
chr15	37365026	37490808	chr15:37365026-37490808	3	-	37365026	37365026	8553170	4	148,119,126,70,	0,1957,55033,125712,
#Deleted in new
chr15	37490690	37491103	chr15:37490690-37491103	7	+	37490690	37490690	16724991	1	413,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	37933252	37941194	chr15:37933252-37941194	0	+	37936323	37941194	789624	7	304,92,150,124,51,72,46,	0,2004,3061,3594,4093,4905,7896,
#Partially deleted in new
chr15	37934625	37967724	chr15:37934625-37967724	1	+	37936323	37966643	789624	12	69,92,150,124,51,72,57,60,65,58,41,1100,	0,631,1688,2221,2720,3532,6523,7045,7565,8715,13030,31999,
#Deleted in new
chr15	37934639	37936949	chr15:37934639-37936949	0	+	37936323	37936949	789624	5	55,92,175,150,103,	0,617,1379,1674,2207,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	37934642	37944426	chr15:37934642-37944426	1	+	37936323	37942259	789624	9	52,92,150,124,51,72,57,60,2236,	0,614,1671,2204,2703,3515,6506,7028,7548,
#Partially deleted in new
chr15	37934655	37951285	chr15:37934655-37951285	0	+	37936323	37942246	789624	12	39,92,150,124,51,72,57,73,65,58,41,250,	0,601,1658,2191,2690,3502,6493,7015,7535,8685,13000,16380,
#Partially deleted in new
chr15	37935256	37951539	chr15:37935256-37951539	3	+	37936323	37951234	789624	11	92,150,124,51,72,57,60,65,58,41,504,	0,1057,1590,2089,2901,5892,6414,6934,8084,12399,15779,
#Partially deleted in new
chr15	37935256	37942387	chr15:37935256-37942387	0	+	37935256	37935256	8553170	8	92,150,124,51,72,57,60,197,	0,1057,1590,2089,2901,5892,6414,6934,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	37984765	38040987	chr15:37984765-38040987	3	+	37984765	37984765	8553170	3	70,85,992,	0,8636,55230,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	37993408	38025018	chr15:37993408-38025018	0	+	37993408	37993408	8553170	3	78,167,338,	0,1158,31272,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	38004745	38025018	chr15:38004745-38025018	1	+	38004745	38004745	8553170	3	87,341,338,	0,15446,19935,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	38040392	38062340	chr15:38040392-38062340	1	+	38040392	38040392	789624	4	37,102,116,150,	0,4181,19502,21798,
#Deleted in new
chr15	38069480	38071902	chr15:38069480-38071902	3	-	38069480	38069480	8553170	2	460,73,	0,2349,
#Deleted in new
chr15	38071626	38072683	chr15:38071626-38072683	1	-	38071626	38071626	8553170	2	331,636,	0,421,
#Deleted in new
chr15	38071626	38072090	chr15:38071626-38072090	0	-	38071626	38071626	8553170	1	464,	0,
#Deleted in new
chr15	38072017	38072959	chr15:38072017-38072959	0	-	38072017	38072017	789624	1	942,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	38142259	38226887	chr15:38142259-38226887	0	-	38142259	38142259	8553170	3	584,106,138,	0,81991,84490,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	38252325	38357249	chr15:38252325-38357249	3	+	38253185	38351664	0	7	892,175,169,47,159,102,6236,	0,47047,69915,72437,87411,97096,98688,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	38252847	38326363	chr15:38252847-38326363	0	+	38252847	38252847	8553170	5	370,175,169,47,416,	0,46525,69393,71915,73100,
#Partially deleted in new
chr15	38253180	38339771	chr15:38253180-38339771	0	+	38299403	38339771	789624	6	37,64,175,169,47,35,	0,14993,46192,69060,71582,86556,
#Partially deleted in new
chr15	38454126	38487710	chr15:38454126-38487710	3	+	38454161	38484659	789624	8	106,146,135,179,81,117,168,3456,	0,9905,11142,16100,19378,20055,27165,30128,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	38454153	38483665	chr15:38454153-38483665	1	+	38454161	38481555	789624	7	79,146,135,179,81,117,2374,	0,9878,11115,16073,19351,20028,27138,
#Deleted in new
chr15	38458759	38459540	chr15:38458759-38459540	7	-	38458759	38458759	16724991	1	781,	0,
#Partially deleted in new
chr15	38464148	38470662	chr15:38464148-38470662	0	+	38464148	38464148	8553170	3	29,135,436,	0,1120,6078,
#Partially deleted in new
chr15	38465345	38484638	chr15:38465345-38484638	0	+	38465345	38484638	789624	4	58,179,21,47,	0,4881,8159,19246,
#Partially deleted in new
chr15	38488102	38564806	chr15:38488102-38564806	3	-	38490553	38564628	0	17	2586,386,153,37,145,110,105,81,276,117,174,154,132,63,106,185,213,	0,6279,10691,12000,13040,14209,15169,17737,19623,23501,24680,28094,30189,31206,38196,71718,76491,
#Partially deleted in new
chr15	38488104	38564806	chr15:38488104-38564806	1	-	38490553	38564628	789624	17	2584,386,153,37,145,110,105,81,276,117,174,154,132,56,113,185,213,	0,6277,10689,11998,13038,14207,15167,17735,19621,23499,24678,28092,30187,31204,38187,71716,76489,
#Partially deleted in new
chr15	38490094	38560082	chr15:38490094-38560082	0	-	38490553	38560082	789624	16	594,386,153,37,145,110,105,81,276,117,174,154,132,63,106,262,	0,4287,8699,10008,11048,12217,13177,15745,17631,21509,22688,26102,28197,29214,36204,69726,
#Partially deleted in new
chr15	38490479	38565575	chr15:38490479-38565575	1	-	38490553	38565489	789624	17	209,386,153,37,145,110,105,81,276,117,174,154,132,63,106,185,274,	0,3902,8314,9623,10663,11832,12792,15360,17246,21124,22303,25717,27812,28829,35819,69341,74822,
#Partially deleted in new
chr15	38490553	38564635	chr15:38490553-38564635	0	-	38500126	38564628	0	15	135,386,153,37,110,81,276,117,174,154,132,63,106,185,42,	0,3828,8240,9549,11758,15286,17172,21050,22229,25643,27738,28755,35745,69267,74040,
#Partially deleted in new
chr15	38490553	38564635	chr15:38490553-38564635	1	-	38490553	38564628	0	16	135,386,153,37,145,110,81,276,117,174,154,132,63,106,185,42,	0,3828,8240,9549,10589,11758,15286,17172,21050,22229,25643,27738,28755,35745,69267,74040,
#Partially deleted in new
chr15	38490553	38564635	chr15:38490553-38564635	1	-	38490662	38564628	0	14	135,37,145,110,81,276,117,174,154,132,63,106,185,42,	0,9549,10589,11758,15286,17172,21050,22229,25643,27738,28755,35745,69267,74040,
#Partially deleted in new
chr15	38490553	38564635	chr15:38490553-38564635	1	-	38490662	38564628	0	15	135,153,37,145,110,81,276,117,174,154,132,63,106,185,42,	0,8240,9549,10589,11758,15286,17172,21050,22229,25643,27738,28755,35745,69267,74040,
#Partially deleted in new
chr15	38494451	38501190	chr15:38494451-38501190	0	-	38498897	38501190	789624	4	316,391,37,48,	0,4342,5651,6691,
#Partially deleted in new
chr15	38498915	38511705	chr15:38498915-38511705	0	-	38501263	38511705	789624	8	31,37,145,61,110,81,276,102,	0,1187,2227,2459,3396,6924,8810,12688,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	38502852	38504981	chr15:38502852-38504981	3	+	38502852	38502852	8553170	1	2129,	0,
#Partially deleted in new
chr15	38518380	38560279	chr15:38518380-38560279	0	-	38518380	38559896	789624	5	43,63,106,185,150,	0,928,7918,41440,41749,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	38524069	38534655	chr15:38524069-38534655	3	+	38524069	38524069	8553170	3	375,106,72,	0,10118,10514,
#Partially deleted in new
chr15	38526308	38565239	chr15:38526308-38565239	0	-	38526308	38559896	789624	3	96,185,267,	0,33512,38664,
#Partially deleted in new
chr15	38526383	38565169	chr15:38526383-38565169	0	-	38526383	38559896	789624	3	21,185,98,	0,33437,38688,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	38628004	38689314	chr15:38628004-38689314	0	+	38628004	38628004	8553170	5	151,125,92,68,421,	0,8009,14910,20408,60889,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	38628004	39058327	chr15:38628004-39058327	0	+	38628004	38628004	8553170	7	151,421,86,181,57,115,1021,	0,60889,105231,363280,365370,366896,429302,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	38628059	39180499	chr15:38628059-39180499	0	+	38628059	38628059	8553170	5	96,62,157,181,1359,	0,194938,544919,548693,551081,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	38671846	38689191	chr15:38671846-38689191	0	+	38671846	38671846	8553170	2	94,298,	0,17047,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	38671854	38678008	chr15:38671854-38678008	0	+	38671854	38671854	8553170	4	86,140,61,222,	0,763,4539,5932,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	38696597	38700038	chr15:38696597-38700038	3	+	38696607	38698545	789624	2	142,1901,	0,1540,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	38696597	38700038	chr15:38696597-38700038	0	+	38696597	38696597	8553170	2	142,1901,	0,1540,
#Partially deleted in new
chr15	38696597	38733321	chr15:38696597-38733321	0	+	38696597	38696597	8553170	2	142,86,	0,36638,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	38702872	38824576	chr15:38702872-38824576	0	+	38702872	38702872	8553170	3	52,174,1579,	0,86155,120125,
#Deleted in new
chr15	38756551	38759413	chr15:38756551-38759413	3	-	38756551	38756551	8553170	4	213,53,179,378,	0,342,2210,2484,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	38851305	38853432	chr15:38851305-38853432	3	-	38851305	38851305	8553170	1	2127,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	38865321	39118713	chr15:38865321-39118713	1	-	38865321	38865321	8553170	8	401,215,146,132,233,81,106,64,	0,2648,2990,20175,21375,108833,206181,253328,
#Partially deleted in new
chr15	38885469	39273883	chr15:38885469-39273883	3	-	38885469	38885469	8553170	6	159,100,81,80,106,44,	0,1360,88685,133032,186033,388370,
#Partially deleted in new
chr15	39019232	39024918	chr15:39019232-39024918	3	+	39019232	39019232	8553170	3	92,206,276,	0,4921,5410,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	39071502	39196004	chr15:39071502-39196004	1	-	39071502	39071502	8553170	3	106,98,1927,	0,38198,122575,
#Partially deleted in new
chr15	39071570	39427195	chr15:39071570-39427195	1	-	39071570	39071570	8553170	3	38,353,98,	0,288218,355527,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	39167738	39179926	chr15:39167738-39179926	3	+	39167738	39167738	8553170	5	94,157,181,154,110,	0,5240,9014,11402,12078,
#Deleted in new
chr15	39167807	39169807	chr15:39167807-39169807	1	+	39167807	39167807	8553170	3	25,107,301,	0,928,1699,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	39176764	39180048	chr15:39176764-39180048	0	+	39176764	39176764	8553170	2	169,232,	0,3052,
#Partially deleted in new
chr15	39188437	39194309	chr15:39188437-39194309	1	-	39188437	39188437	8553170	2	1729,232,	0,5640,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	39250683	39254845	chr15:39250683-39254845	3	+	39250683	39250683	789624	2	180,2898,	0,1264,
#Deleted in new
chr15	39250765	39252913	chr15:39250765-39252913	0	+	39250765	39250765	8553170	2	98,855,	0,1293,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	39299338	39420951	chr15:39299338-39420951	0	-	39299338	39299338	8553170	2	144,408,	0,121205,
#Partially deleted in new
chr15	39300417	39310782	chr15:39300417-39310782	0	-	39300417	39300417	8553170	2	179,166,	0,10199,
#Deleted in new
chr15	39472702	39473604	chr15:39472702-39473604	1	+	39472702	39472702	8553170	2	516,214,	0,688,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	39473272	39479378	chr15:39473272-39479378	3	+	39473272	39473272	8553170	2	416,163,	0,5943,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	39512334	39519954	chr15:39512334-39519954	3	-	39512334	39512334	8553170	4	305,65,107,244,	0,1464,1740,7376,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	39512481	39519854	chr15:39512481-39519854	0	-	39512481	39512481	8553170	4	158,53,107,144,	0,1317,1593,7229,
#Deleted in new
chr15	39581078	39582407	chr15:39581078-39582407	0	+	39581857	39582407	789624	3	150,217,215,	0,629,1114,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr15	39581092	39599466	chr15:39581092-39599466	3	+	39581857	39595369	0	22	136,96,560,76,200,123,94,174,177,174,128,153,219,108,160,119,235,228,272,98,140,4105,	0,736,1100,2524,2895,3207,4377,6254,6949,7433,7866,8109,8712,9423,10098,10412,11475,11907,12304,13006,13208,14269,
#Deleted in new
chr15	39586560	39587293	chr15:39586560-39587293	3	+	39586560	39586560	8553170	1	733,	0,
#Partially deleted in new
chr15	39587430	39588785	chr15:39587430-39588785	0	+	39587430	39587430	8553170	3	90,177,260,	0,611,1095,
#Partially deleted in new
chr15	39587451	39588472	chr15:39587451-39588472	0	+	39587451	39587451	8553170	2	69,431,	0,590,
#Deleted in new
chr15	39588356	39588882	chr15:39588356-39588882	3	-	39588356	39588356	8553170	1	526,	0,
#Partially deleted in new
chr15	39588356	39618243	chr15:39588356-39618243	0	-	39600879	39618243	789624	4	218,179,82,509,	0,5698,12488,29378,
#Deleted in new
chr15	39588847	39589843	chr15:39588847-39589843	0	+	39588847	39588847	8553170	3	239,153,39,	0,354,957,
#Deleted in new
chr15	39590927	39591618	chr15:39590927-39591618	0	+	39590927	39590927	8553170	2	423,114,	0,577,
#Deleted in new
chr15	39593044	39595529	chr15:39593044-39595529	0	+	39593044	39593044	8553170	4	183,800,140,168,	0,352,1256,2317,
#Partially deleted in new
chr15	39593579	39600926	chr15:39593579-39600926	0	-	39600879	39600926	789624	3	104,179,82,	0,475,7265,
#Deleted in new
chr15	39594067	39595551	chr15:39594067-39595551	0	+	39594067	39594067	8553170	2	373,190,	0,1294,
#Partially deleted in new
chr15	39600030	39782830	chr15:39600030-39782830	3	-	39600879	39776524	789624	12	896,511,138,159,111,125,96,94,155,184,133,203,	0,17704,113413,126558,138060,139634,141774,163790,165561,170396,176368,182597,
#Deleted in new
chr15	39600248	39600926	chr15:39600248-39600926	0	-	39600879	39600926	789624	2	21,82,	0,596,
#Partially deleted in new
chr15	39739664	39747447	chr15:39739664-39747447	0	-	39739664	39739664	8553170	3	125,96,146,	0,2140,7637,
#Partially deleted in new
chr15	39770558	39801333	chr15:39770558-39801333	3	-	39770558	39770558	8553170	3	52,133,133,	0,5840,30642,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	39782570	39785617	chr15:39782570-39785617	3	+	39782570	39782570	789624	1	3047,	0,
#Partially deleted in new
chr15	39799031	39920225	chr15:39799031-39920225	1	-	39801131	39920026	789624	4	3223,192,58,371,	0,7974,8536,120823,
#Partially deleted in new
chr15	39800729	39920892	chr15:39800729-39920892	3	-	39801131	39920026	789624	3	1525,253,1038,	0,6276,119125,
#Partially deleted in new
chr15	39800948	39829276	chr15:39800948-39829276	1	-	39801131	39829117	789624	3	1306,253,196,	0,6057,28132,
#Partially deleted in new
chr15	39801626	39919951	chr15:39801626-39919951	0	-	39801626	39801626	8553170	3	628,103,97,	0,59193,118228,
#Partially deleted in new
chr15	39801823	39894527	chr15:39801823-39894527	0	-	39801823	39801823	8553170	6	431,253,103,84,92,72,	0,5182,58996,60253,60504,92632,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	39813222	39815429	chr15:39813222-39815429	3	-	39813222	39813222	8553170	3	404,51,112,	0,1674,2095,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	39921041	39924899	chr15:39921041-39924899	1	+	39921041	39921041	8553170	2	617,2113,	0,1745,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	39921069	39925880	chr15:39921069-39925880	3	+	39921069	39921069	8553170	1	4811,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	39922781	39922886	chr15:39922781-39922886	3	-	39922781	39922781	8553170	1	105,	0,
#Partially deleted in new
chr15	39934145	39975429	chr15:39934145-39975429	1	+	39934195	39973782	789624	11	194,113,103,153,81,149,116,158,536,107,1838,	0,5359,9237,14970,19758,21474,27638,31540,33198,38762,39446,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr15	39934152	40035590	chr15:39934152-40035590	3	+	39934195	40035084	789624	39	187,113,103,153,81,149,116,158,536,107,158,431,70,84,123,105,55,80,102,54,237,76,122,50,169,117,66,171,135,108,129,87,113,59,98,69,45,119,564,	0,5352,9230,14963,19751,21467,27631,31533,33191,38755,39439,42261,43925,51652,53830,56120,58022,58616,62811,64578,66835,68560,69040,72863,73874,75461,77128,82349,82955,84940,86746,88366,91824,95253,96206,98016,98604,100173,100874,
#Deleted in new
chr15	39951374	39951708	chr15:39951374-39951708	7	-	39951374	39951374	16724991	1	334,	0,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr15	39953974	40035591	chr15:39953974-40035591	0	+	39953974	40035084	789624	34	10,149,116,158,536,107,158,431,70,123,105,55,80,102,54,237,76,122,50,169,117,66,171,135,108,129,87,113,59,98,69,45,119,565,	0,1645,7809,11711,13369,18933,19617,22439,24103,34008,36298,38200,38794,42989,44756,47013,48738,49218,53041,54052,55639,57306,62527,63133,65118,66924,68544,72002,75431,76384,78194,78782,80351,81052,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	39976978	39978292	chr15:39976978-39978292	0	+	39976978	39976978	8553170	1	1314,	0,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr15	39991165	40035591	chr15:39991165-40035591	0	+	39991165	39991165	8553170	22	1683,102,54,237,76,122,50,169,117,66,171,135,108,129,87,113,59,98,69,45,119,565,	0,5798,7565,9822,11547,12027,15850,16861,18448,20115,25336,25942,27927,29733,31353,34811,38240,39193,41003,41591,43160,43861,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr15	40002390	40035591	chr15:40002390-40035591	0	+	40002390	40002390	8553170	17	398,122,50,169,117,66,135,108,129,87,113,59,98,69,45,119,565,	0,802,4625,5636,7223,8890,14717,16702,18508,20128,23586,27015,27968,29778,30366,31935,32636,
#Partially deleted in new
chr15	40002390	40008193	chr15:40002390-40008193	0	+	40002390	40002390	8553170	5	120,76,122,50,167,	0,322,802,4625,5636,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	40020525	40022597	chr15:40020525-40022597	0	+	40020525	40020525	8553170	2	502,79,	0,1993,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	40021542	40026002	chr15:40021542-40026002	0	+	40021542	40021542	8553170	2	1063,26,	0,4434,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	40030392	40035481	chr15:40030392-40035481	0	+	40030392	40035084	789624	3	64,119,455,	0,3933,4634,
#Deleted in new
chr15	40035738	40039188	chr15:40035738-40039188	3	-	40036332	40039116	0	5	762,33,113,73,96,	0,1247,2543,3137,3354,
#Deleted in new
chr15	40036040	40039164	chr15:40036040-40039164	0	-	40036040	40036040	8553170	6	460,33,40,113,73,72,	0,945,1268,2241,2835,3052,
#Deleted in new
chr15	40036041	40039050	chr15:40036041-40039050	1	-	40036332	40036988	789624	4	459,33,113,175,	0,944,2240,2834,
#Deleted in new
chr15	40036242	40039156	chr15:40036242-40039156	1	-	40036332	40036988	789624	4	258,33,113,64,	0,743,2039,2850,
#Deleted in new
chr15	40036253	40038873	chr15:40036253-40038873	0	-	40036253	40036253	8553170	4	247,33,113,350,	0,732,2028,2270,
#Deleted in new
chr15	40036303	40038948	chr15:40036303-40038948	0	-	40036303	40036303	8553170	5	197,33,47,113,73,	0,682,1005,1978,2572,
#Deleted in new
chr15	40036687	40039153	chr15:40036687-40039153	1	-	40036880	40039116	789624	4	331,113,73,61,	0,1594,2188,2405,
#Deleted in new
chr15	40036985	40039162	chr15:40036985-40039162	0	-	40036985	40036985	8553170	3	33,667,70,	0,1296,2107,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	40039310	40067290	chr15:40039310-40067290	3	+	40039310	40039310	789624	3	138,109,2070,	0,6650,25910,
#Partially deleted in new
chr15	40039348	40057000	chr15:40039348-40057000	1	+	40039348	40039348	789624	4	100,109,189,271,	0,6612,17104,17381,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	40064386	40065705	chr15:40064386-40065705	0	+	40064386	40064386	8553170	2	215,485,	0,834,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	40075203	40078704	chr15:40075203-40078704	3	-	40075203	40075203	8553170	2	817,47,	0,3454,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	40078891	40079347	chr15:40078891-40079347	3	+	40078891	40078891	8553170	1	456,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	40087889	40108874	chr15:40087889-40108874	3	-	40091786	40106086	789624	5	3999,161,297,128,102,	0,16290,17905,20369,20883,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	40087892	40106448	chr15:40087892-40106448	1	-	40091786	40106086	789624	4	3996,161,297,91,	0,16287,17902,18465,
#Deleted in new
chr15	40088831	40089386	chr15:40088831-40089386	3	+	40088831	40088831	8553170	2	284,177,	0,378,
#Partially deleted in new
chr15	40091675	40106645	chr15:40091675-40106645	1	-	40091786	40106086	789624	4	213,161,299,62,	0,12504,14119,14908,
#Partially deleted in new
chr15	40091717	40106422	chr15:40091717-40106422	1	-	40091786	40106086	789624	4	171,161,297,118,	0,12462,14077,14587,
#Partially deleted in new
chr15	40091733	40108892	chr15:40091733-40108892	1	-	40091790	40106086	789624	4	155,297,99,120,	0,14061,16525,17039,
#Partially deleted in new
chr15	40091786	40106086	chr15:40091786-40106086	1	-	40091786	40106086	789624	3	102,98,292,	0,12456,14008,
#Partially deleted in new
chr15	40091790	40108879	chr15:40091790-40108879	1	-	40091790	40106086	789624	4	98,297,128,107,	0,14004,16468,16982,
#Deleted in new
chr15	40105902	40108879	chr15:40105902-40108879	0	-	40105902	40106086	789624	4	189,81,128,107,	0,455,2356,2870,
#Deleted in new
chr15	40106047	40108704	chr15:40106047-40108704	0	-	40106047	40106086	789624	2	44,446,	0,2211,
#Deleted in new
chr15	40108042	40108878	chr15:40108042-40108878	0	-	40108042	40108042	8553170	2	344,106,	0,730,
#Deleted in new
chr15	40133767	40135214	chr15:40133767-40135214	7	-	40133767	40133767	16724991	1	1447,	0,
#Partially deleted in new
chr15	40161022	40176621	chr15:40161022-40176621	0	+	40161022	40161022	8553170	4	233,60,145,145,	0,9039,9514,15454,
#Partially deleted in new
chr15	40161025	40221136	chr15:40161025-40221136	3	+	40161220	40220759	0	23	230,144,60,145,197,170,215,92,230,113,116,50,61,106,275,134,141,101,150,143,172,107,573,	0,4027,9036,9511,15451,22688,24139,24525,35519,38589,39218,39905,41379,41563,45158,47611,48609,49084,51473,52306,56470,57430,59538,
#Partially deleted in new
chr15	40161042	40176550	chr15:40161042-40176550	0	+	40161042	40161042	8553170	5	213,144,60,35,74,	0,4010,9019,9494,15434,
#Partially deleted in new
chr15	40161066	40221038	chr15:40161066-40221038	1	+	40161220	40220759	0	23	189,144,102,145,197,170,215,92,230,113,116,50,61,106,275,134,141,101,150,143,172,107,475,	0,3986,8995,9470,15410,22647,24098,24484,35478,38548,39177,39864,41338,41522,45117,47570,48568,49043,51432,52265,56429,57389,59497,
#Partially deleted in new
chr15	40183713	40202634	chr15:40183713-40202634	0	+	40183713	40196573	789624	7	170,230,113,116,50,61,46,	0,12831,15901,16530,17217,18691,18875,
#Partially deleted in new
chr15	40183723	40185481	chr15:40183723-40185481	0	+	40183723	40183723	8553170	2	160,317,	0,1441,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	40185325	40196734	chr15:40185325-40196734	0	+	40185325	40185325	8553170	3	317,126,190,	0,1603,11219,
#Partially deleted in new
chr15	40185471	40200289	chr15:40185471-40200289	0	+	40185471	40185471	8553170	4	171,230,113,46,	0,11073,14143,14772,
#Partially deleted in new
chr15	40200037	40206274	chr15:40200037-40206274	0	+	40200037	40200037	8553170	5	322,50,61,106,91,	0,893,2367,2551,6146,
#Partially deleted in new
chr15	40217416	40220644	chr15:40217416-40220644	0	+	40217416	40217416	8553170	3	251,107,81,	0,1039,3147,
#Partially deleted in new
chr15	40217427	40276181	chr15:40217427-40276181	0	+	40217584	40264987	789624	10	240,112,209,654,498,134,127,126,135,255,	0,35750,47353,48414,54796,55438,55918,56123,56714,58499,
#Partially deleted in new
chr15	40217448	40276396	chr15:40217448-40276396	3	+	40264785	40276094	789624	11	219,83,112,209,654,498,134,127,126,135,470,	0,23150,35729,47332,48393,54775,55417,55897,56102,56693,58478,
#Partially deleted in new
chr15	40217586	40276387	chr15:40217586-40276387	0	+	40217586	40264987	789624	11	81,83,112,209,654,498,134,127,126,135,461,	0,23012,35591,47194,48255,54637,55279,55759,55964,56555,58340,
#Partially deleted in new
chr15	40218499	40264890	chr15:40218499-40264890	0	+	40218499	40264454	789624	6	63,154,83,112,86,110,	0,2064,22099,34678,45943,46281,
#Deleted in new
chr15	40226385	40227069	chr15:40226385-40227069	3	+	40226385	40226385	8553170	1	684,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	40232081	40236109	chr15:40232081-40236109	3	+	40232081	40232081	8553170	1	4028,	0,
#Partially deleted in new
chr15	40238758	40265951	chr15:40238758-40265951	0	+	40264785	40265951	789624	5	377,83,112,209,110,	0,1840,14419,26022,27083,
#Partially deleted in new
chr15	40239053	40266003	chr15:40239053-40266003	0	+	40264785	40266003	789624	4	82,112,209,162,	0,14124,25727,26788,
#Partially deleted in new
chr15	40239090	40277486	chr15:40239090-40277486	1	+	40264785	40276094	0	10	712,83,112,209,654,498,134,127,126,1560,	0,1508,14087,25690,26751,33133,33775,34255,34460,36836,
#Partially deleted in new
chr15	40239419	40277485	chr15:40239419-40277485	3	+	40264785	40276094	0	11	383,83,112,209,654,498,134,127,126,135,1559,	0,1179,13758,25361,26422,32804,33446,33926,34131,34722,36507,
#Partially deleted in new
chr15	40239869	40277487	chr15:40239869-40277487	1	+	40264785	40276094	0	11	226,83,112,209,654,498,134,127,126,135,1561,	0,729,13308,24911,25972,32354,32996,33476,33681,34272,36057,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	40240521	40264940	chr15:40240521-40264940	0	+	40263906	40264940	789624	4	160,112,121,160,	0,12656,23277,24259,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	40240566	40264989	chr15:40240566-40264989	0	+	40263906	40264989	789624	4	115,112,116,209,	0,12611,23237,24214,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	40240644	40264827	chr15:40240644-40264827	0	+	40263906	40264827	789624	5	37,112,244,121,47,	0,12533,16198,23154,24136,
#Deleted in new
chr15	40244924	40247366	chr15:40244924-40247366	3	+	40244924	40244924	8553170	1	2442,	0,
#Deleted in new
chr15	40250663	40252910	chr15:40250663-40252910	3	-	40250663	40250663	8553170	2	1876,253,	0,1994,
#Deleted in new
chr15	40251775	40252969	chr15:40251775-40252969	0	-	40251775	40251775	8553170	1	1194,	0,
#Partially deleted in new
chr15	40252189	40266006	chr15:40252189-40266006	0	+	40264785	40266006	789624	4	74,112,209,165,	0,988,12591,13652,
#Partially deleted in new
chr15	40252547	40265974	chr15:40252547-40265974	0	+	40264785	40265974	789624	4	144,112,209,133,	0,630,12233,13294,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	40252550	40264980	chr15:40252550-40264980	0	+	40263906	40264980	789624	4	141,112,116,200,	0,627,11253,12230,
#Partially deleted in new
chr15	40252887	40265964	chr15:40252887-40265964	0	+	40264785	40265964	789624	4	127,112,209,123,	0,290,11893,12954,
#Partially deleted in new
chr15	40253002	40266491	chr15:40253002-40266491	0	+	40264785	40266491	789624	3	287,209,650,	0,11778,12839,
#Partially deleted in new
chr15	40253183	40277487	chr15:40253183-40277487	1	+	40264785	40276094	0	10	106,209,654,498,134,127,126,135,179,372,	0,11597,12658,19040,19682,20162,20367,20958,22743,23932,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	40258500	40260370	chr15:40258500-40260370	3	+	40258500	40258500	8553170	1	1870,	0,
#Deleted in new
chr15	40266013	40266982	chr15:40266013-40266982	0	+	40266013	40266013	8553170	2	482,60,	0,909,
#Partially deleted in new
chr15	40266611	40272354	chr15:40266611-40272354	0	+	40266611	40266611	8553170	2	386,131,	0,5612,
#Partially deleted in new
chr15	40273929	40276384	chr15:40273929-40276384	0	+	40273929	40273929	8553170	2	347,458,	0,1997,
#Partially deleted in new
chr15	40278175	40289572	chr15:40278175-40289572	0	-	40278175	40278175	8553170	3	169,93,301,	0,6263,11096,
#Deleted in new
chr15	40281443	40282586	chr15:40281443-40282586	3	-	40281443	40282586	789624	1	1143,	0,
#Partially deleted in new
chr15	40284255	40290672	chr15:40284255-40290672	0	-	40284510	40290672	789624	4	276,87,58,96,	0,5016,5769,6321,
#Deleted in new
chr15	40285467	40285909	chr15:40285467-40285909	3	-	40285467	40285467	8553170	1	442,	0,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr15	40287906	40307922	chr15:40287906-40307922	3	-	40288714	40307672	0	32	1012,87,58,96,77,166,223,45,76,95,105,100,165,155,125,85,97,113,163,85,83,158,147,167,101,76,54,80,141,69,78,334,	0,1365,2118,2670,2854,3111,3358,3699,3942,4157,4432,5019,5653,6359,7029,7294,8389,8615,8839,9614,9970,10316,10655,10891,11221,14050,14229,14363,14562,15381,16094,19682,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	40287907	40291329	chr15:40287907-40291329	0	-	40287907	40287907	8553170	6	1011,87,58,96,77,312,	0,1364,2117,2669,2853,3110,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr15	40287908	40307837	chr15:40287908-40307837	1	-	40288714	40307672	0	32	1010,87,58,96,77,166,223,45,76,95,105,100,165,155,125,85,97,113,151,85,83,158,147,167,101,76,54,80,141,69,78,249,	0,1363,2116,2668,2852,3109,3356,3697,3940,4155,4430,5017,5651,6357,7027,7292,8387,8613,8849,9612,9968,10314,10653,10889,11219,14048,14227,14361,14560,15379,16092,19680,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr15	40287908	40307693	chr15:40287908-40307693	0	-	40287908	40287908	8553170	29	1010,87,96,77,166,660,95,105,100,165,155,125,85,97,113,163,85,83,158,147,167,101,76,54,80,141,69,78,105,	0,1363,2668,2852,3109,3356,4155,4430,5017,5651,6357,7027,7292,8387,8613,8837,9612,9968,10314,10653,10889,11219,14048,14227,14361,14560,15379,16092,19680,
#Partially deleted in new
chr15	40287908	40289292	chr15:40287908-40289292	0	-	40288714	40289292	789624	3	100,317,21,	0,693,1363,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr15	40288138	40307825	chr15:40288138-40307825	1	-	40288714	40307672	0	31	780,87,58,96,77,166,223,76,95,105,100,165,155,125,85,97,113,163,85,83,158,147,167,101,76,54,80,141,69,78,237,	0,1133,1886,2438,2622,2879,3126,3710,3925,4200,4787,5421,6127,6797,7062,8157,8383,8607,9382,9738,10084,10423,10659,10989,13818,13997,14131,14330,15149,15862,19450,
#Deleted in new
chr15	40288571	40291330	chr15:40288571-40291330	0	-	40288571	40288571	8553170	5	71,87,58,261,66,	0,700,1453,2005,2693,
#Deleted in new
chr15	40289065	40291353	chr15:40289065-40291353	0	-	40289065	40289065	8553170	4	293,58,261,89,	0,959,1511,2199,
#Deleted in new
chr15	40291873	40293622	chr15:40291873-40293622	0	-	40291873	40291873	8553170	4	285,105,100,63,	0,465,1052,1686,
#Deleted in new
chr15	40296564	40297719	chr15:40296564-40297719	0	-	40296564	40296564	8553170	3	70,163,199,	0,181,956,
#Deleted in new
chr15	40298293	40299289	chr15:40298293-40299289	0	-	40298293	40298293	8553170	4	87,147,167,162,	0,268,504,834,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	40300666	40307910	chr15:40300666-40307910	1	-	40301591	40307672	789624	8	943,76,54,80,141,69,78,322,	0,1290,1469,1603,1802,2621,3334,6922,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	40300669	40301820	chr15:40300669-40301820	3	+	40300669	40300669	8553170	2	356,212,	0,939,
#Partially deleted in new
chr15	40303886	40307935	chr15:40303886-40307935	0	-	40303886	40303886	8553170	2	192,347,	0,3702,
#Deleted in new
chr15	40312351	40313289	chr15:40312351-40313289	7	-	40312351	40312351	16724991	1	938,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	40312614	40316634	chr15:40312614-40316634	3	+	40312614	40312614	8553170	1	4020,	0,
#Deleted in new
chr15	40323663	40326715	chr15:40323663-40326715	3	+	40324055	40324517	789624	1	3052,	0,
#Deleted in new
chr15	40325215	40326715	chr15:40325215-40326715	0	+	40325215	40325215	8553170	2	273,321,	0,1179,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	40331451	40338976	chr15:40331451-40338976	0	-	40331451	40331451	8553170	8	4249,43,91,54,59,170,126,229,	0,4332,5122,5308,5936,6272,7083,7296,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	40331451	40338133	chr15:40331451-40338133	1	-	40335157	40338097	789624	7	4249,43,91,54,59,170,51,	0,4332,5122,5308,5936,6272,6631,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	40331536	40331648	chr15:40331536-40331648	7	-	40331536	40331536	16724991	1	112,	0,
#Deleted in new
chr15	40333756	40340967	chr15:40333756-40340967	3	-	40335157	40340951	789624	11	1944,43,91,54,59,170,126,156,108,111,160,	0,2027,2817,3003,3631,3967,4778,4991,5755,6148,7051,
#Deleted in new
chr15	40335632	40338040	chr15:40335632-40338040	0	-	40335632	40335819	789624	5	68,43,54,59,317,	0,151,1127,1755,2091,
#Deleted in new
chr15	40336558	40340638	chr15:40336558-40340638	0	-	40336558	40336558	8553170	5	888,170,126,872,734,	0,1165,1976,2189,3346,
#Deleted in new
chr15	40337849	40340042	chr15:40337849-40340042	0	-	40337849	40339991	789624	5	44,126,156,108,138,	0,685,898,1662,2055,
#Deleted in new
chr15	40339587	40340920	chr15:40339587-40340920	0	-	40339587	40339587	8553170	3	102,111,113,	0,317,1220,
#Partially deleted in new
chr15	40351032	40356434	chr15:40351032-40356434	3	+	40353257	40356303	789624	4	30,36,8,362,	0,2199,3312,5040,
#Partially deleted in new
chr15	40351032	40353772	chr15:40351032-40353772	0	+	40351032	40351032	8553170	2	30,541,	0,2199,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	40358234	40378639	chr15:40358234-40378639	3	+	40358321	40370318	789624	8	206,330,30,124,116,128,98,11582,	0,5390,5991,6186,6603,6912,7393,8823,
#Deleted in new
chr15	40365006	40365694	chr15:40365006-40365694	0	+	40365006	40365006	8553170	2	268,67,	0,621,
#Deleted in new
chr15	40368924	40369640	chr15:40368924-40369640	3	-	40368924	40368924	8553170	2	112,370,	0,346,
#Deleted in new
chr15	40369854	40371056	chr15:40369854-40371056	0	+	40369854	40369854	8553170	2	74,445,	0,757,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	40371824	40372476	chr15:40371824-40372476	0	+	40371824	40371824	8553170	2	298,103,	0,549,
#Partially deleted in new
chr15	40382720	40394245	chr15:40382720-40394245	3	+	40382835	40393597	789624	9	324,95,133,48,106,94,62,75,777,	0,507,3641,4438,6785,7115,8772,9228,10748,
#Partially deleted in new
chr15	40382720	40394154	chr15:40382720-40394154	1	+	40382835	40393231	789624	9	324,95,133,48,106,94,62,75,962,	0,507,3641,4438,6785,7115,8772,9228,10472,
#Deleted in new
chr15	40382720	40383438	chr15:40382720-40383438	0	+	40382720	40382720	8553170	2	324,211,	0,507,
#Partially deleted in new
chr15	40382720	40394172	chr15:40382720-40394172	0	+	40382835	40386481	789624	9	324,95,90,48,106,94,62,75,704,	0,507,3684,4438,6785,7115,8772,9228,10748,
#Partially deleted in new
chr15	40382835	40394172	chr15:40382835-40394172	1	+	40382835	40391989	789624	8	209,95,133,48,106,94,75,704,	0,392,3526,4323,6670,7000,9113,10633,
#Partially deleted in new
chr15	40382938	40393677	chr15:40382938-40393677	0	+	40382938	40387210	789624	9	106,95,133,60,106,94,62,75,209,	0,289,3423,4220,6567,6897,8554,9010,10530,
#Partially deleted in new
chr15	40382940	40384922	chr15:40382940-40384922	0	+	40382940	40382940	8553170	3	104,95,466,	0,287,1516,
#Partially deleted in new
chr15	40382940	40394246	chr15:40382940-40394246	1	+	40383252	40393597	789624	9	104,95,133,48,106,94,62,75,778,	0,287,3421,4218,6565,6895,8552,9008,10528,
#Partially deleted in new
chr15	40382975	40393626	chr15:40382975-40393626	0	+	40382975	40384494	789624	10	69,95,63,133,48,106,94,62,75,158,	0,252,1481,3386,4183,6530,6860,8517,8973,10493,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	40382975	40384676	chr15:40382975-40384676	0	+	40382975	40382975	8553170	4	69,95,150,220,	0,252,1065,1481,
#Partially deleted in new
chr15	40382978	40394160	chr15:40382978-40394160	0	+	40382978	40389519	789624	9	66,95,133,48,123,94,62,75,692,	0,249,3383,4180,6510,6857,8514,8970,10490,
#Partially deleted in new
chr15	40382979	40393618	chr15:40382979-40393618	0	+	40382979	40389523	789624	7	65,95,123,94,62,75,150,	0,248,6509,6856,8513,8969,10489,
#Partially deleted in new
chr15	40383003	40386848	chr15:40383003-40386848	0	+	40383003	40383003	8553170	3	41,95,487,	0,224,3358,
#Partially deleted in new
chr15	40383254	40392023	chr15:40383254-40392023	0	+	40383254	40389519	789624	5	68,106,94,62,75,	0,6251,6581,8238,8694,
#Partially deleted in new
chr15	40389807	40392000	chr15:40389807-40392000	0	+	40389807	40389807	8553170	2	122,508,	0,1685,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	40405794	40421299	chr15:40405794-40421299	1	+	40405818	40418263	789624	11	177,52,170,94,137,97,94,82,105,73,3170,	0,2144,4833,5465,5760,7196,9094,9606,10283,10495,12335,
#Partially deleted in new
chr15	40405794	40418767	chr15:40405794-40418767	3	+	40405818	40418263	789624	12	177,90,52,170,94,137,97,94,82,105,73,638,	0,1841,2144,4833,5465,5760,7196,9094,9606,10283,10495,12335,
#Partially deleted in new
chr15	40405794	40411351	chr15:40405794-40411351	0	+	40405818	40411351	789624	5	177,177,52,170,92,	0,1841,2144,4833,5465,
#Partially deleted in new
chr15	40406073	40411690	chr15:40406073-40411690	0	+	40406254	40411690	789624	6	277,90,52,170,94,136,	0,1562,1865,4554,5186,5481,
#Partially deleted in new
chr15	40407945	40435556	chr15:40407945-40435556	0	+	40407945	40435556	789624	9	45,170,94,137,97,94,82,61,140,	0,2682,3314,3609,5045,6943,7455,25908,27471,
#Deleted in new
chr15	40410718	40413178	chr15:40410718-40413178	0	+	40410718	40410718	8553170	4	79,94,137,188,	0,541,836,2272,
#Partially deleted in new
chr15	40410735	40435765	chr15:40410735-40435765	0	+	40410735	40415447	789624	8	62,94,137,97,82,105,73,349,	0,524,819,2255,4665,5342,5554,24681,
#Partially deleted in new
chr15	40411607	40435947	chr15:40411607-40435947	0	+	40411607	40435531	789624	8	84,97,94,82,105,73,82,531,	0,1383,3281,3793,4470,4682,12527,23809,
#Partially deleted in new
chr15	40412611	40418175	chr15:40412611-40418175	0	+	40412611	40412611	8553170	7	68,97,94,82,105,73,46,	0,379,2277,2789,3466,3678,5518,
#Deleted in new
chr15	40414405	40415461	chr15:40414405-40415461	0	+	40414405	40414405	8553170	2	577,61,	0,995,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	40415145	40419157	chr15:40415145-40419157	0	+	40415145	40415145	8553170	4	337,105,73,1028,	0,932,1144,2984,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	40416154	40419373	chr15:40416154-40419373	0	+	40416154	40419202	789624	3	28,73,194,	0,135,3025,
#Partially deleted in new
chr15	40416166	40424473	chr15:40416166-40424473	0	+	40416166	40424220	789624	3	16,73,339,	0,123,7968,
#Partially deleted in new
chr15	40439720	40468229	chr15:40439720-40468229	1	+	40458464	40466130	789624	7	245,1446,380,160,77,101,2289,	0,18730,22194,24140,24750,25614,26220,
#Partially deleted in new
chr15	40441211	40468242	chr15:40441211-40468242	3	+	40458464	40466130	789624	7	57,1446,383,160,77,101,2302,	0,17239,20700,22649,23259,24123,24729,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	40453443	40454639	chr15:40453443-40454639	3	-	40453443	40453443	8553170	3	103,118,363,	0,384,833,
#Partially deleted in new
chr15	40458464	40468228	chr15:40458464-40468228	1	+	40458464	40466130	789624	6	1432,383,160,77,92,2288,	0,3447,5396,6006,6879,7476,
#Deleted in new
chr15	40464192	40466726	chr15:40464192-40466726	3	-	40464192	40464192	8553170	3	364,189,176,	0,1006,2358,
#Deleted in new
chr15	40464909	40466004	chr15:40464909-40466004	0	+	40464909	40464909	8553170	2	526,64,	0,1031,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	40470997	40474571	chr15:40470997-40474571	3	+	40471213	40472344	789624	1	3574,	0,
#Deleted in new
chr15	40471085	40473128	chr15:40471085-40473128	1	+	40471213	40472344	789624	2	554,1414,	0,629,
#Deleted in new
chr15	40480751	40481315	chr15:40480751-40481315	7	-	40480751	40480751	16724991	1	564,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	40488040	40558019	chr15:40488040-40558019	3	+	40488040	40488040	8553170	4	167,113,931,1066,	0,20291,64802,68913,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	40508023	40553250	chr15:40508023-40553250	0	+	40508023	40508023	8553170	3	44,113,408,	0,308,44819,
#Partially deleted in new
chr15	40528682	40565011	chr15:40528682-40565011	1	-	40528741	40563015	789624	4	108,157,256,36,	0,28533,34089,36293,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	40529569	40529673	chr15:40529569-40529673	3	+	40529569	40529569	8553170	1	104,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	40531330	40563027	chr15:40531330-40563027	0	-	40553970	40563015	789624	4	972,533,157,256,	0,22264,25885,31441,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	40531340	40564992	chr15:40531340-40564992	1	-	40532298	40563015	789624	4	962,157,256,202,	0,25875,31431,33450,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	40534342	40564989	chr15:40534342-40564989	0	-	40553970	40563015	789624	5	5013,691,157,256,14,	0,19094,22873,28429,30633,
#Partially deleted in new
chr15	40534899	40565011	chr15:40534899-40565011	1	-	40534916	40563015	789624	5	111,117,157,256,36,	0,4339,22316,27872,30076,
#Partially deleted in new
chr15	40539228	40565011	chr15:40539228-40565011	1	-	40539234	40563015	789624	4	127,157,256,36,	0,17987,23543,25747,
#Partially deleted in new
chr15	40539234	40565057	chr15:40539234-40565057	1	-	40539234	40563015	789624	4	121,157,256,267,	0,17981,23537,25556,
#Partially deleted in new
chr15	40553098	40565052	chr15:40553098-40565052	1	-	40553970	40563015	789624	4	1029,157,256,262,	0,4117,9673,11692,
#Partially deleted in new
chr15	40553103	40565057	chr15:40553103-40565057	3	-	40553970	40563015	789624	4	1024,157,256,82,	0,4112,9668,11872,
#Partially deleted in new
chr15	40553941	40564980	chr15:40553941-40564980	1	-	40553970	40564780	789624	4	186,157,256,215,	0,3274,8830,10824,
#Partially deleted in new
chr15	40553979	40565019	chr15:40553979-40565019	0	-	40553979	40557319	789624	3	148,157,44,	0,3236,10996,
#Partially deleted in new
chr15	40554017	40565014	chr15:40554017-40565014	0	-	40554017	40563015	789624	4	110,157,251,39,	0,3198,8754,10958,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	40556620	40565042	chr15:40556620-40565042	1	-	40557211	40563015	789624	3	752,256,67,	0,6151,8355,
#Partially deleted in new
chr15	40561980	40565035	chr15:40561980-40565035	0	-	40561980	40561980	8553170	3	27,256,60,	0,791,2995,
#Partially deleted in new
chr15	40561998	40562803	chr15:40561998-40562803	0	-	40561998	40561998	8553170	2	208,32,	0,773,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	40569299	40574943	chr15:40569299-40574943	3	+	40569337	40574261	789624	3	644,297,1417,	0,2304,4227,
#Partially deleted in new
chr15	40569331	40574358	chr15:40569331-40574358	1	+	40569337	40574261	789624	3	429,297,832,	0,2272,4195,
#Deleted in new
chr15	40569436	40570067	chr15:40569436-40570067	0	+	40569436	40569955	789624	1	631,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	40585453	40585751	chr15:40585453-40585751	3	-	40585453	40585453	8553170	1	298,	0,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr15	40594019	40664342	chr15:40594019-40664342	3	+	40602931	40662188	0	27	373,52,40,60,62,53,78,34,38,53,5001,139,68,99,116,91,117,88,78,40,102,101,69,110,119,123,2269,	0,8895,11090,12373,14827,16225,16779,17458,21321,24939,26620,34050,34591,35253,46892,50977,51636,52967,56281,56524,57451,57985,60889,63022,63335,65319,68054,
#Partially deleted in new
chr15	40594033	40610289	chr15:40594033-40610289	0	+	40610266	40610289	789624	5	359,52,60,62,45,	0,8881,12359,14813,16211,
#Partially deleted in new
chr15	40594034	40623159	chr15:40594034-40623159	0	+	40594034	40594034	8553170	9	358,52,40,60,62,53,28,38,2520,	0,8880,11075,12358,14812,16210,17449,21306,26605,
#Partially deleted in new
chr15	40594248	40662683	chr15:40594248-40662683	1	+	40602931	40662188	0	26	144,52,40,60,62,53,34,38,53,5001,139,68,99,116,91,117,88,78,40,102,101,69,110,119,123,610,	0,8666,10861,12144,14598,15996,17229,21092,24710,26391,33821,34362,35024,46663,50748,51407,52738,56052,56295,57222,57756,60660,62793,63106,65090,67825,
#Partially deleted in new
chr15	40594248	40625584	chr15:40594248-40625584	1	+	40602931	40625582	789624	11	144,52,40,60,62,53,34,38,53,4828,40,	0,8666,10861,12144,14598,15996,17229,21092,24710,26391,31296,
#Partially deleted in new
chr15	40594248	40610297	chr15:40594248-40610297	0	+	40610266	40610297	789624	3	144,62,53,	0,14598,15996,
#Partially deleted in new
chr15	40594264	40626042	chr15:40594264-40626042	0	+	40594264	40594264	8553170	10	128,52,40,60,62,53,34,38,53,5403,	0,8650,10845,12128,14582,15980,17213,21076,24694,26375,
#Partially deleted in new
chr15	40594271	40645712	chr15:40594271-40645712	0	+	40602931	40640991	789624	8	121,52,40,40,48,116,91,57,	0,8643,10838,12121,35052,46640,50725,51384,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	40615664	40615928	chr15:40615664-40615928	3	-	40615664	40615664	8553170	1	264,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr15	40623131	40664339	chr15:40623131-40664339	0	+	40623131	40662188	789624	18	2509,139,68,99,116,91,117,88,78,40,102,101,69,110,119,123,610,1005,	0,4938,5479,6141,17780,21865,22524,23855,27169,27412,28339,28873,31777,33910,34223,36207,38942,40203,
#Partially deleted in new
chr15	40628073	40647038	chr15:40628073-40647038	0	+	40628073	40647038	789624	6	135,68,116,91,117,52,	0,537,12838,16923,17582,18913,
#Partially deleted in new
chr15	40646885	40650365	chr15:40646885-40650365	0	+	40646885	40646885	8553170	2	189,65,	0,3415,
#Partially deleted in new
chr15	40650126	40654977	chr15:40650126-40654977	0	+	40650126	40650126	8553170	5	252,40,102,101,69,	0,417,1344,1878,4782,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	40662572	40663904	chr15:40662572-40663904	0	+	40662572	40662572	8553170	2	106,563,	0,769,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	40686242	40695093	chr15:40686242-40695093	1	-	40686242	40686242	8553170	4	904,46,210,82,	0,1556,8343,8769,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	40686723	40695096	chr15:40686723-40695096	1	-	40686723	40686723	8553170	3	423,210,85,	0,7862,8288,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	40693740	40695107	chr15:40693740-40695107	0	-	40693740	40693740	789624	2	1055,96,	0,1271,
#Partially deleted in new
chr15	40694773	40718886	chr15:40694773-40718886	0	+	40698758	40718886	789624	6	47,89,138,118,92,82,	0,3983,6290,11403,14251,24031,
#Partially deleted in new
chr15	40695128	40731592	chr15:40695128-40731592	1	+	40698758	40731123	0	9	297,89,138,118,92,95,114,130,538,	0,3628,5935,11048,13896,23676,33582,34376,35926,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	40695128	40732158	chr15:40695128-40732158	3	+	40698758	40731123	789624	9	297,89,138,118,92,95,114,130,1104,	0,3628,5935,11048,13896,23676,33582,34376,35926,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	40695159	40732339	chr15:40695159-40732339	3	+	40698758	40731178	0	10	266,89,138,118,92,95,114,130,122,1285,	0,3597,5904,11017,13865,23645,33551,34345,34693,35895,
#Partially deleted in new
chr15	40695171	40731590	chr15:40695171-40731590	1	+	40698758	40731178	0	8	254,89,138,14,114,130,122,536,	0,3585,5892,23714,33539,34333,34681,35883,
#Partially deleted in new
chr15	40695186	40731557	chr15:40695186-40731557	0	+	40698758	40728731	789624	9	239,89,138,118,92,114,130,122,503,	0,3570,5877,10990,13838,33524,34318,34666,35868,
#Partially deleted in new
chr15	40695462	40701201	chr15:40695462-40701201	0	+	40698758	40701201	789624	3	398,89,138,	0,3294,5601,
#Partially deleted in new
chr15	40698756	40729634	chr15:40698756-40729634	0	+	40698758	40709102	789624	6	89,138,92,95,114,130,	0,2307,10268,20048,29954,30748,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	40735883	40755851	chr15:40735883-40755851	3	-	40736540	40754783	789624	12	711,81,54,99,78,76,61,103,283,144,193,1255,	0,1240,1404,1744,2081,2617,4249,8163,9093,15542,16102,18713,
#Partially deleted in new
chr15	40735884	40739680	chr15:40735884-40739680	0	-	40735884	40735884	8553170	6	710,81,54,99,78,1180,	0,1239,1403,1743,2080,2616,
#Partially deleted in new
chr15	40735887	40755260	chr15:40735887-40755260	1	-	40736540	40754783	789624	13	707,81,54,99,78,76,61,103,283,144,193,194,178,	0,1236,1400,1740,2077,2613,4245,8159,9089,15538,16098,18709,19195,
#Partially deleted in new
chr15	40735887	40755246	chr15:40735887-40755246	0	-	40751500	40754783	789624	14	707,81,54,99,78,76,61,103,283,144,193,34,62,164,	0,1236,1400,1740,2077,2613,4245,8159,9089,15538,16098,18709,18841,19195,
#Partially deleted in new
chr15	40736337	40737820	chr15:40736337-40737820	0	-	40736337	40736337	8553170	2	257,697,	0,786,
#Partially deleted in new
chr15	40736426	40745211	chr15:40736426-40745211	0	-	40736540	40745211	789624	9	168,81,54,99,78,76,61,181,235,	0,697,861,1201,1538,2074,3706,7620,8550,
#Partially deleted in new
chr15	40737628	40744305	chr15:40737628-40744305	0	-	40737628	40737628	8553170	5	98,78,76,61,259,	0,336,872,2504,6418,
#Partially deleted in new
chr15	40737677	40752178	chr15:40737677-40752178	0	-	40737677	40737677	8553170	5	49,78,140,144,193,	0,287,7442,13748,14308,
#Partially deleted in new
chr15	40738509	40755253	chr15:40738509-40755253	0	-	40738509	40754783	789624	6	67,61,245,193,194,171,	0,1623,12916,13476,16087,16573,
#Partially deleted in new
chr15	40740149	40747782	chr15:40740149-40747782	0	-	40740149	40740149	8553170	4	44,103,283,152,	0,3897,4827,7481,
#Partially deleted in new
chr15	40744093	40755336	chr15:40744093-40755336	0	-	40744093	40754783	789624	6	56,283,144,193,194,138,	0,883,7332,7892,10503,11105,
#Partially deleted in new
chr15	40760596	40760874	chr15:40760596-40760874	7	+	40760596	40760596	16724991	1	278,	0,
#Partially deleted in new
chr15	40764019	40767710	chr15:40764019-40767710	3	+	40764180	40767349	789624	3	197,95,485,	0,1807,3206,
#Partially deleted in new
chr15	40764103	40766285	chr15:40764103-40766285	1	+	40764180	40765925	789624	2	113,459,	0,1723,
#Partially deleted in new
chr15	40764122	40767543	chr15:40764122-40767543	1	+	40764180	40767231	789624	2	94,318,	0,3103,
#Partially deleted in new
chr15	40764126	40767699	chr15:40764126-40767699	1	+	40764180	40767349	789624	3	90,62,474,	0,1733,3099,
#Partially deleted in new
chr15	40764425	40767642	chr15:40764425-40767642	1	+	40765841	40767349	789624	3	183,95,417,	0,1401,2800,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	40765154	40807477	chr15:40765154-40807477	3	-	40767939	40807446	0	11	2908,111,81,78,44,97,86,88,59,70,109,	0,8572,9201,9876,10398,11041,11387,14068,14390,14773,42214,
#Partially deleted in new
chr15	40765619	40767708	chr15:40765619-40767708	1	+	40765841	40767349	789624	2	302,483,	0,1606,
#Partially deleted in new
chr15	40767872	40775621	chr15:40767872-40775621	0	-	40767872	40767872	8553170	5	190,111,81,78,69,	0,5854,6483,7158,7680,
#Partially deleted in new
chr15	40767877	40807473	chr15:40767877-40807473	0	-	40780121	40807446	789624	12	185,111,81,78,44,97,86,88,59,147,260,105,	0,5849,6478,7153,7675,8318,8664,11345,11667,11973,12215,39491,
#Partially deleted in new
chr15	40767912	40770289	chr15:40767912-40770289	0	-	40767912	40767912	8553170	2	150,357,	0,2020,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	40770079	40772449	chr15:40770079-40772449	3	+	40770495	40771023	789624	1	2370,	0,
#Partially deleted in new
chr15	40773781	40807473	chr15:40773781-40807473	0	-	40779085	40807446	789624	10	56,81,78,44,97,86,227,59,70,105,	0,574,1249,1771,2414,2760,5302,5763,6146,33587,
#Partially deleted in new
chr15	40774252	40807452	chr15:40774252-40807452	0	-	40776209	40807446	789624	8	184,78,44,97,88,59,70,84,	0,778,1300,1943,4970,5292,5675,33116,
#Partially deleted in new
chr15	40774355	40807473	chr15:40774355-40807473	0	-	40776386	40807446	789624	9	81,141,44,206,86,88,59,70,105,	0,612,1197,1840,2186,4867,5189,5572,33013,
#Partially deleted in new
chr15	40774364	40807457	chr15:40774364-40807457	0	-	40776386	40807446	789624	9	72,78,44,206,86,88,59,70,89,	0,666,1188,1831,2177,4858,5180,5563,33004,
#Partially deleted in new
chr15	40775257	40807477	chr15:40775257-40807477	0	-	40775257	40775257	8553170	7	339,97,86,227,59,70,109,	0,938,1284,3826,4287,4670,32111,
#Partially deleted in new
chr15	40775576	40776886	chr15:40775576-40776886	0	-	40775576	40775576	8553170	3	20,97,345,	0,619,965,
#Partially deleted in new
chr15	40776386	40807478	chr15:40776386-40807478	1	-	40776386	40807446	789624	6	15,86,88,59,70,110,	0,155,2836,3158,3541,30982,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	40779553	40780567	chr15:40779553-40780567	0	-	40779553	40779553	8553170	3	50,70,336,	0,374,678,
#Partially deleted in new
chr15	40807085	40814345	chr15:40807085-40814345	1	+	40807288	40814226	789624	12	336,77,122,51,119,146,109,204,80,99,128,198,	0,706,2033,2322,2766,2985,3563,5613,6252,6627,6857,7062,
#Partially deleted in new
chr15	40807088	40815084	chr15:40807088-40815084	3	+	40807589	40814226	789624	11	780,122,51,119,146,109,204,80,99,128,937,	0,2030,2319,2763,2982,3560,5610,6249,6624,6854,7059,
#Partially deleted in new
chr15	40807088	40814565	chr15:40807088-40814565	1	+	40809924	40814226	789624	11	583,122,51,119,146,109,204,80,99,128,418,	0,2030,2319,2763,2982,3560,5610,6249,6624,6854,7059,
#Partially deleted in new
chr15	40807233	40814569	chr15:40807233-40814569	1	+	40807288	40814226	789624	12	180,124,122,51,119,146,109,204,80,99,128,422,	0,1021,1885,2174,2618,2837,3415,5465,6104,6479,6709,6914,
#Partially deleted in new
chr15	40807589	40814569	chr15:40807589-40814569	1	+	40807589	40814226	789624	10	279,122,51,119,146,109,80,99,128,422,	0,1529,1818,2262,2481,3059,5748,6123,6353,6558,
#Partially deleted in new
chr15	40807641	40810099	chr15:40807641-40810099	0	+	40807641	40809164	789624	6	227,32,122,51,119,29,	0,402,1477,1766,2210,2429,
#Partially deleted in new
chr15	40807659	40809185	chr15:40807659-40809185	0	+	40807659	40807659	8553170	2	209,173,	0,1353,
#Partially deleted in new
chr15	40807676	40813800	chr15:40807676-40813800	0	+	40807676	40813800	789624	8	192,122,51,119,146,109,95,88,	0,1442,1731,2175,2394,2972,5646,6036,
#Partially deleted in new
chr15	40807733	40810683	chr15:40807733-40810683	0	+	40807733	40809164	789624	6	135,85,51,119,146,35,	0,1422,1674,2118,2337,2915,
#Partially deleted in new
chr15	40807756	40812902	chr15:40807756-40812902	0	+	40807756	40812902	789624	6	112,122,119,146,109,204,	0,1362,2095,2314,2892,4942,
#Partially deleted in new
chr15	40807762	40814064	chr15:40807762-40814064	0	+	40807762	40809455	789624	9	106,51,119,146,109,204,80,99,122,	0,1645,2089,2308,2886,4936,5575,5950,6180,
#Partially deleted in new
chr15	40807767	40814521	chr15:40807767-40814521	0	+	40807767	40809129	789624	11	54,122,51,119,146,109,204,80,99,128,374,	0,1351,1640,2084,2303,2881,4931,5570,5945,6175,6380,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	40808120	40814569	chr15:40808120-40814569	0	+	40808120	40808120	8553170	5	1338,365,109,474,627,	0,1731,2528,5217,5822,
#Deleted in new
chr15	40808918	40810195	chr15:40808918-40810195	0	+	40809924	40810195	789624	4	322,51,119,125,	0,489,933,1152,
#Partially deleted in new
chr15	40810080	40811074	chr15:40810080-40811074	0	+	40810080	40810080	8553170	2	136,426,	0,568,
#Deleted in new
chr15	40813662	40814322	chr15:40813662-40814322	0	+	40813662	40813662	8553170	3	149,128,175,	0,280,485,
#Partially deleted in new
chr15	40815444	40828709	chr15:40815444-40828709	3	-	40815695	40828641	789624	4	317,33,84,323,	0,517,725,12942,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	40815570	40828709	chr15:40815570-40828709	1	-	40815646	40828641	789624	5	191,33,84,116,323,	0,391,599,1661,12816,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	40835807	40844332	chr15:40835807-40844332	3	-	40835807	40835807	8553170	2	475,154,	0,8371,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	40835992	40844387	chr15:40835992-40844387	1	-	40835992	40835992	8553170	3	290,144,209,	0,2550,8186,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	40835996	40844284	chr15:40835996-40844284	1	-	40835996	40835996	8553170	4	286,93,144,106,	0,2036,2546,8182,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	40838338	40844300	chr15:40838338-40844300	0	-	40838338	40838338	8553170	2	348,122,	0,5840,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	40838550	40840493	chr15:40838550-40840493	0	-	40838550	40838550	8553170	2	136,114,	0,1829,
#Partially deleted in new
chr15	40844017	40858207	chr15:40844017-40858207	3	+	40844554	40856975	0	11	169,540,128,139,219,27,126,51,171,48,1438,	0,472,9106,9471,9693,10042,10379,10621,11874,12258,12752,
#Partially deleted in new
chr15	40844017	40857655	chr15:40844017-40857655	1	+	40844554	40856975	0	11	169,540,128,139,171,27,126,51,171,48,886,	0,472,9106,9471,9693,10042,10379,10621,11874,12258,12752,
#Partially deleted in new
chr15	40844066	40853783	chr15:40844066-40853783	0	+	40844066	40853783	789624	5	120,540,128,79,73,	0,423,9057,9482,9644,
#Partially deleted in new
chr15	40844176	40853873	chr15:40844176-40853873	0	+	40844554	40853873	789624	5	102,540,128,139,163,	0,313,8947,9312,9534,
#Partially deleted in new
chr15	40844674	40856949	chr15:40844674-40856949	0	+	40844674	40856949	789624	9	355,128,139,219,126,51,171,48,180,	0,8449,8814,9036,9722,9964,11217,11601,12095,
#Partially deleted in new
chr15	40853195	40856826	chr15:40853195-40856826	0	+	40853195	40856826	789624	8	56,139,171,27,51,171,48,57,	0,293,515,864,1443,2696,3080,3574,
#Partially deleted in new
chr15	40853509	40856967	chr15:40853509-40856967	0	+	40853509	40856967	789624	7	118,171,126,51,171,48,198,	0,201,887,1129,2382,2766,3260,
#Partially deleted in new
chr15	40853815	40856969	chr15:40853815-40856969	0	+	40853815	40856969	789624	6	114,27,51,171,48,200,	0,244,823,2076,2460,2954,
#Partially deleted in new
chr15	40854209	40857123	chr15:40854209-40857123	0	+	40854209	40854209	8553170	5	313,51,171,48,354,	0,429,1682,2066,2560,
#Partially deleted in new
chr15	40854377	40856021	chr15:40854377-40856021	0	+	40854377	40854377	8553170	2	312,130,	0,1514,
#Deleted in new
chr15	40855800	40856899	chr15:40855800-40856899	0	+	40855800	40855800	8553170	3	262,48,130,	0,475,969,
#Deleted in new
chr15	40872213	40874289	chr15:40872213-40874289	3	-	40873057	40874139	789624	3	1288,59,358,	0,1470,1718,
#Deleted in new
chr15	40874432	40874595	chr15:40874432-40874595	3	+	40874432	40874432	8553170	1	163,	0,
#Partially deleted in new
chr15	40894429	40903975	chr15:40894429-40903975	3	+	40894768	40903341	789624	5	430,142,92,1871,1360,	0,1508,4477,4714,8186,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	40894451	40899397	chr15:40894451-40899397	0	+	40894768	40898912	789624	5	408,142,154,92,254,	0,1486,4206,4455,4692,
#Partially deleted in new
chr15	40894466	40902861	chr15:40894466-40902861	1	+	40894768	40902656	789624	4	393,142,92,246,	0,1471,4440,8149,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	40906810	40910337	chr15:40906810-40910337	3	+	40906810	40906810	8553170	2	75,1509,	0,2018,
#Partially deleted in new
chr15	40929332	40939073	chr15:40929332-40939073	3	+	40929668	40938034	789624	11	402,270,58,264,61,131,170,220,703,109,1045,	0,514,1292,2170,2838,2984,5215,5565,6895,8085,8696,
#Partially deleted in new
chr15	40929339	40939073	chr15:40929339-40939073	1	+	40929668	40938034	0	11	395,270,58,264,61,131,170,220,703,109,1045,	0,507,1285,2163,2831,2977,5208,5558,6888,8078,8689,
#Deleted in new
chr15	40929339	40930890	chr15:40929339-40930890	0	+	40929339	40929339	8553170	2	395,1044,	0,507,
#Partially deleted in new
chr15	40930879	40934921	chr15:40930879-40934921	0	+	40930879	40930879	8553170	5	887,61,131,170,24,	0,1291,1437,3668,4018,
#Deleted in new
chr15	40948735	40948869	chr15:40948735-40948869	7	-	40948735	40948735	16724991	1	134,	0,
#Partially deleted in new
chr15	40952961	40955822	chr15:40952961-40955822	1	+	40953583	40955774	789624	4	853,36,42,273,	0,1266,2411,2588,
#Partially deleted in new
chr15	40953148	40956519	chr15:40953148-40956519	1	+	40953583	40955774	789624	3	666,36,1147,	0,1079,2224,
#Partially deleted in new
chr15	40953437	40956519	chr15:40953437-40956519	3	+	40953457	40955774	789624	3	377,36,1147,	0,790,1935,
#Partially deleted in new
chr15	40953437	40956519	chr15:40953437-40956519	1	+	40953457	40955774	789624	4	377,36,42,970,	0,790,1935,2112,
#Partially deleted in new
chr15	40954205	40956167	chr15:40954205-40956167	1	+	40955660	40955774	789624	2	58,795,	0,1167,
#Partially deleted in new
chr15	40978879	41116354	chr15:40978879-41116354	3	-	40980222	41096310	0	36	1561,216,160,156,89,103,159,73,95,128,226,141,172,94,65,134,168,86,118,85,143,60,96,81,210,68,196,204,54,215,121,156,68,170,186,382,	0,3982,4882,5317,6458,8211,8936,18649,26713,37208,42020,48716,66024,68528,69332,70407,71055,75049,76367,77742,79759,80987,90690,91587,92969,94548,95490,100821,102140,106489,108682,113147,116721,116879,117288,137093,
#Partially deleted in new
chr15	40978879	41116280	chr15:40978879-41116280	1	-	40980222	41096310	789624	36	1561,216,160,156,89,103,159,73,95,128,226,141,172,94,65,134,168,86,118,85,143,60,96,81,210,68,196,204,54,215,121,156,68,170,186,308,	0,3982,4882,5317,6458,8211,8936,18649,26713,37208,42020,48716,66024,68528,69332,70407,71055,75049,76367,77742,79759,80987,90690,91587,92969,94548,95490,100821,102140,106489,108682,113147,116721,116879,117288,137093,
#Partially deleted in new
chr15	40978892	41116153	chr15:40978892-41116153	1	-	40980222	41096310	0	37	365,949,216,160,156,89,103,159,73,95,128,226,141,172,94,65,134,168,86,118,85,143,60,96,81,210,68,196,204,54,215,121,156,68,170,186,181,	0,599,3969,4869,5304,6445,8198,8923,18636,26700,37195,42007,48703,66011,68515,69319,70394,71042,75036,76354,77729,79746,80974,90677,91574,92956,94535,95477,100808,102127,106476,108669,113134,116708,116866,117275,137080,
#Partially deleted in new
chr15	40978927	41116132	chr15:40978927-41116132	0	-	41005646	41096310	789624	35	1513,216,160,156,89,103,159,73,95,226,141,172,94,65,134,168,86,118,85,143,60,96,81,210,68,196,204,54,215,121,156,68,170,186,160,	0,3934,4834,5269,6410,8163,8888,18601,26665,41972,48668,65976,68480,69284,70359,71007,75001,76319,77694,79711,80939,90642,91539,92921,94500,95442,100773,102092,106441,108634,113099,116673,116831,117240,137045,
#Partially deleted in new
chr15	40979910	40983219	chr15:40979910-40983219	0	-	40979910	40979910	8553170	2	530,358,	0,2951,
#Partially deleted in new
chr15	40980222	41116132	chr15:40980222-41116132	1	-	40980222	40987926	789624	34	64,56,156,89,103,159,73,95,226,141,172,94,65,134,168,86,118,85,143,60,96,81,210,68,196,204,54,215,121,156,68,170,186,160,	0,3643,3974,5115,6868,7593,17306,25370,40677,47373,64681,67185,67989,69064,69712,73706,75024,76399,78416,79644,89347,90244,91626,93205,94147,99478,100797,105146,107339,111804,115378,115536,115945,135750,
#Partially deleted in new
chr15	40980301	40983986	chr15:40980301-40983986	0	-	40980301	40980301	8553170	3	139,216,225,	0,2560,3460,
#Partially deleted in new
chr15	40983797	41069659	chr15:40983797-41069659	0	-	41055323	41069659	789624	19	124,156,89,103,159,73,95,128,141,172,94,65,134,168,86,118,85,60,90,	0,399,1540,3293,4018,13731,21795,32290,43798,61106,63610,64414,65489,66137,70131,71449,72824,76069,85772,
#Partially deleted in new
chr15	40984343	40997710	chr15:40984343-40997710	0	-	40984343	40984343	8553170	5	9,89,103,159,182,	0,994,2747,3472,13185,
#Partially deleted in new
chr15	40985348	41005357	chr15:40985348-41005357	0	-	40985348	40985348	8553170	5	78,103,159,73,80,	0,1742,2467,12180,19929,
#Partially deleted in new
chr15	40997576	41027599	chr15:40997576-41027599	0	-	41023268	41027599	789624	6	25,95,128,226,121,4,	0,8016,18511,23323,25649,30019,
#Partially deleted in new
chr15	40999273	41004865	chr15:40999273-41004865	3	+	40999273	40999273	8553170	2	167,333,	0,5259,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	41011596	41013300	chr15:41011596-41013300	3	+	41011596	41011596	8553170	2	140,274,	0,1430,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	41016806	41024542	chr15:41016806-41024542	3	+	41016806	41016806	8553170	4	29,127,100,56,	0,1695,2656,7680,
#Deleted in new
chr15	41016989	41018843	chr15:41016989-41018843	3	-	41016989	41016989	8553170	1	1854,	0,
#Partially deleted in new
chr15	41024498	41027893	chr15:41024498-41027893	1	+	41024498	41024498	8553170	2	139,305,	0,3090,
#Partially deleted in new
chr15	41069511	41072015	chr15:41069511-41072015	0	-	41069511	41069511	8553170	3	154,81,167,	0,955,2337,
#Deleted in new
chr15	41108877	41109178	chr15:41108877-41109178	7	+	41108877	41108877	16724991	1	301,	0,
#Deleted in new
chr15	41157174	41157342	chr15:41157174-41157342	7	-	41157174	41157174	16724991	1	168,	0,
#Partially deleted in new
chr15	41163161	41164374	chr15:41163161-41164374	7	+	41163161	41163161	16724991	2	282,608,	0,605,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	41182724	41230697	chr15:41182724-41230697	3	-	41183930	41230506	789624	10	1869,192,144,81,105,87,59,128,58,219,	0,7212,8717,13050,13208,26776,33050,33943,34372,47754,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	41182734	41190370	chr15:41182734-41190370	0	-	41182734	41182734	8553170	2	1859,434,	0,7202,
#Partially deleted in new
chr15	41183738	41230691	chr15:41183738-41230691	1	-	41183930	41226575	789624	12	855,192,144,81,105,87,59,128,58,69,186,213,	0,6198,7703,12036,12194,25762,32036,32929,33358,36091,42704,46740,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	41191964	41192265	chr15:41191964-41192265	3	-	41191964	41191964	8553170	1	301,	0,
#Partially deleted in new
chr15	41216747	41230542	chr15:41216747-41230542	0	-	41216747	41216747	8553170	6	48,58,176,69,186,64,	0,349,2711,3082,9695,13731,
#Partially deleted in new
chr15	41217122	41230743	chr15:41217122-41230743	0	-	41217122	41226575	789624	3	32,186,265,	0,9320,13356,
#Partially deleted in new
chr15	41230838	41279435	chr15:41230838-41279435	0	+	41230838	41230838	8553170	8	128,73,81,128,71,62,123,100,	0,12828,26071,31917,33326,39718,47928,48497,
#Partially deleted in new
chr15	41231139	41279719	chr15:41231139-41279719	0	+	41231382	41262769	789624	6	310,81,128,62,123,384,	0,25770,31616,39417,47627,48196,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	41231142	41281890	chr15:41231142-41281890	3	+	41231382	41279389	0	7	307,73,81,128,62,123,2555,	0,12524,25767,31613,39414,47624,48193,
#Partially deleted in new
chr15	41231221	41278840	chr15:41231221-41278840	0	+	41231382	41264187	789624	7	228,73,81,128,71,62,74,	0,12445,25688,31534,32943,39335,47545,
#Partially deleted in new
chr15	41231238	41279719	chr15:41231238-41279719	0	+	41231382	41278804	789624	6	211,73,81,128,123,384,	0,12428,25671,31517,47528,48097,
#Partially deleted in new
chr15	41231292	41279402	chr15:41231292-41279402	1	+	41231382	41279389	789624	6	157,73,81,128,62,67,	0,12374,25617,31463,39264,48043,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	41256683	41272375	chr15:41256683-41272375	0	+	41256683	41256683	8553170	5	127,81,128,62,196,	0,226,6072,13873,15496,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	41256909	41272375	chr15:41256909-41272375	0	+	41256909	41272182	789624	4	81,128,62,196,	0,5846,13647,15270,
#Duplicated in new
chr15	41283989	41286426	chr15:41283989-41286426	0	+	41283989	41283989	8553170	3	121,139,416,	0,1235,2021,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	41283989	41298781	chr15:41283989-41298781	0	+	41283989	41283989	8553170	4	299,139,90,741,	0,1235,2021,14051,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	41284004	41306534	chr15:41284004-41306534	1	+	41284004	41284004	789624	4	106,139,90,8494,	0,1220,2006,14036,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	41284005	41297290	chr15:41284005-41297290	0	+	41284005	41284005	8553170	4	105,139,90,487,	0,1219,2005,12798,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	41284007	41288271	chr15:41284007-41288271	0	+	41284007	41284007	8553170	4	103,139,90,310,	0,1217,2003,3954,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	41284009	41285689	chr15:41284009-41285689	0	+	41284009	41284009	8553170	2	101,465,	0,1215,
#Duplicated in new
chr15	41284012	41380743	chr15:41284012-41380743	3	+	41342425	41351006	8553170	13	98,139,90,69,144,142,102,110,185,158,117,109,651,	0,1212,1998,58373,65085,66975,72026,74136,81392,87514,91699,93183,96080,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	41284020	41287474	chr15:41284020-41287474	1	+	41284020	41284020	8553170	4	90,139,424,122,	0,1204,1990,3332,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	41284030	41289155	chr15:41284030-41289155	0	+	41284030	41284030	8553170	4	80,139,90,1173,	0,1194,1980,3952,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	41284031	41309737	chr15:41284031-41309737	3	+	41284031	41284031	8553170	5	79,139,90,58,1018,	0,1193,1979,24535,24688,
#Partially deleted in new
chr15	41309267	41332621	chr15:41309267-41332621	3	-	41309753	41332561	789624	5	582,82,123,67,382,	0,4005,10390,22647,22972,
#Partially deleted in new
chr15	41309761	41332487	chr15:41309761-41332487	0	-	41309761	41332487	789624	4	88,82,67,248,	0,3511,22153,22478,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	41332693	41381050	chr15:41332693-41381050	1	+	41332957	41380186	789624	11	357,69,144,97,102,110,188,158,117,109,958,	0,9692,16404,18339,23345,25455,32708,38833,43018,44502,47399,
#Partially deleted in new
chr15	41332693	41380747	chr15:41332693-41380747	0	+	41332693	41332693	8553170	10	302,69,144,97,102,110,188,158,109,655,	0,9692,16404,18339,23345,25455,32708,38833,44502,47399,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	41332870	41381050	chr15:41332870-41381050	1	+	41332957	41380186	789624	11	180,69,144,142,102,110,185,158,117,109,958,	0,9515,16227,18117,23168,25278,32534,38656,42841,44325,47222,
#Partially deleted in new
chr15	41332870	41380263	chr15:41332870-41380263	1	+	41332957	41380186	789624	9	180,144,142,102,110,185,158,109,171,	0,16227,18117,23168,25278,32534,38656,44325,47222,
#Partially deleted in new
chr15	41332870	41380402	chr15:41332870-41380402	3	+	41332957	41380186	789624	11	180,69,144,142,102,110,188,158,117,109,310,	0,9515,16227,18117,23168,25278,32531,38656,42841,44325,47222,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	41332882	41351986	chr15:41332882-41351986	0	+	41332882	41332882	8553170	5	168,69,144,142,23,	0,9503,16215,18105,19081,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	41332885	41381050	chr15:41332885-41381050	1	+	41332957	41380186	789624	11	165,69,144,139,102,110,185,158,117,109,958,	0,9500,16212,18105,23153,25263,32519,38641,42826,44310,47207,
#Partially deleted in new
chr15	41332898	41349405	chr15:41332898-41349405	0	+	41332898	41332898	8553170	3	152,69,308,	0,9487,16199,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	41332912	41381050	chr15:41332912-41381050	1	+	41332957	41380186	789624	11	138,69,144,139,102,110,188,158,117,109,958,	0,9473,16185,18078,23126,25236,32489,38614,42799,44283,47180,
#Partially deleted in new
chr15	41342395	41375751	chr15:41342395-41375751	0	+	41342395	41365577	789624	4	59,159,158,40,	0,23035,29131,33316,
#Partially deleted in new
chr15	41387348	41402444	chr15:41387348-41402444	3	-	41387443	41397059	789624	5	245,75,186,654,301,	0,1099,7510,9138,14795,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	41387493	41402459	chr15:41387493-41402459	0	-	41394331	41397059	789624	6	100,75,254,186,654,316,	0,954,6611,7365,8993,14650,
#Partially deleted in new
chr15	41394990	41402519	chr15:41394990-41402519	0	-	41394990	41397059	789624	3	54,654,73,	0,1496,7456,
#Partially deleted in new
chr15	41396486	41402442	chr15:41396486-41402442	0	-	41396486	41397059	789624	2	654,183,	0,5773,
#Partially deleted in new
chr15	41408407	41452942	chr15:41408407-41452942	0	+	41408407	41408407	8553170	3	174,111,42,	0,29913,44493,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr15	41417103	41483563	chr15:41417103-41483563	3	+	41417115	41480687	0	18	210,111,148,205,115,112,136,178,83,88,108,78,122,58,78,96,112,2983,	0,21217,35797,40568,47667,49037,53153,54068,57516,58421,58608,59342,60061,60354,61444,61999,63110,63477,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	41448741	41448844	chr15:41448741-41448844	3	-	41448741	41448741	8553170	1	103,	0,
#Deleted in new
chr15	41474586	41477249	chr15:41474586-41477249	0	+	41474586	41474586	8553170	5	116,88,108,78,85,	0,938,1125,1859,2578,
#Deleted in new
chr15	41474668	41477578	chr15:41474668-41477578	0	+	41474668	41477542	789624	6	34,88,108,78,122,121,	0,856,1043,1777,2496,2789,
#Partially deleted in new
chr15	41477188	41478943	chr15:41477188-41478943	0	+	41477188	41477188	8553170	3	98,58,396,	0,269,1359,
#Partially deleted in new
chr15	41478484	41480290	chr15:41478484-41480290	0	+	41478484	41478484	8553170	3	141,96,77,	0,618,1729,
#Partially deleted in new
chr15	41493392	41502488	chr15:41493392-41502488	0	+	41493464	41502488	789624	6	102,144,97,217,205,87,	0,880,8070,8242,8604,9009,
#Partially deleted in new
chr15	41493874	41503551	chr15:41493874-41503551	3	+	41493927	41503166	0	7	542,97,217,205,102,72,589,	0,7588,7760,8122,8527,8913,9088,
#Deleted in new
chr15	41501438	41503099	chr15:41501438-41503099	0	+	41501438	41501438	8553170	6	121,217,205,102,72,137,	0,196,558,963,1349,1524,
#Deleted in new
chr15	41501793	41502645	chr15:41501793-41502645	0	+	41501793	41501793	8553170	3	58,205,244,	0,203,608,
#Partially deleted in new
chr15	41503637	41513879	chr15:41503637-41513879	1	-	41503995	41513709	789624	19	607,91,135,102,93,98,130,65,91,196,96,153,99,157,147,151,172,144,213,	0,704,868,1135,1334,1570,1763,2075,2277,3457,3924,4431,5393,7784,8179,8477,9069,9339,10029,
#Partially deleted in new
chr15	41503641	41513806	chr15:41503641-41513806	3	-	41503995	41513709	789624	20	603,91,135,102,93,98,130,65,91,196,96,153,99,183,157,147,151,172,144,140,	0,700,864,1131,1330,1566,1759,2071,2273,3453,3920,4427,5389,7522,7780,8175,8473,9065,9335,10025,
#Partially deleted in new
chr15	41503641	41513860	chr15:41503641-41513860	0	-	41503641	41503641	8553170	18	603,299,102,93,98,130,65,91,563,153,99,183,157,147,151,172,144,194,	0,700,1131,1330,1566,1759,2071,2273,3453,4427,5389,7522,7780,8175,8473,9065,9335,10025,
#Partially deleted in new
chr15	41503950	41513796	chr15:41503950-41513796	1	-	41503995	41513709	789624	14	294,91,135,102,93,98,130,65,91,196,144,153,99,130,	0,391,555,822,1021,1257,1450,1762,1964,3144,3563,4118,5080,9716,
#Partially deleted in new
chr15	41503966	41513887	chr15:41503966-41513887	1	-	41503995	41513709	789624	18	278,91,135,102,93,98,130,65,80,96,153,99,157,147,151,172,144,221,	0,375,539,806,1005,1241,1434,1746,3128,3595,4102,5064,7455,7850,8148,8740,9010,9700,
#Partially deleted in new
chr15	41505257	41508236	chr15:41505257-41508236	0	-	41505257	41505257	8553170	6	48,130,65,91,80,168,	0,143,455,657,1837,2811,
#Partially deleted in new
chr15	41517175	41544259	chr15:41517175-41544259	3	-	41517541	41537125	789624	25	516,60,177,757,143,153,196,110,202,159,158,171,135,183,168,102,99,116,180,222,121,90,149,257,41,	0,622,830,3215,4562,4922,5589,6069,6595,6920,7815,9722,9991,10247,10684,11059,12294,12688,13847,17538,18336,18953,19325,19769,27043,
#Partially deleted in new
chr15	41517175	41544257	chr15:41517175-41544257	1	-	41517579	41537125	789624	24	516,60,177,143,153,196,110,202,159,158,171,135,183,168,102,99,116,180,222,121,90,149,257,39,	0,622,830,4562,4922,5589,6069,6595,6920,7815,9722,9991,10247,10684,11059,12294,12688,13847,17538,18336,18953,19325,19769,27043,
#Partially deleted in new
chr15	41517175	41521791	chr15:41517175-41521791	0	-	41517175	41517175	8553170	4	516,385,757,54,	0,622,3215,4562,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr15	41517178	41544245	chr15:41517178-41544245	0	-	41520237	41537125	789624	24	513,691,1552,143,153,196,110,202,159,158,171,135,183,168,102,99,116,180,222,121,90,149,257,27,	0,619,2417,4559,4919,5586,6066,6592,6917,7812,9719,9988,10244,10681,11056,12291,12685,13844,17535,18333,18950,19322,19766,27040,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	41522505	41523844	chr15:41522505-41523844	0	-	41522505	41522505	8553170	3	455,110,74,	0,739,1265,
#Partially deleted in new
chr15	41523778	41526970	chr15:41523778-41526970	0	-	41523778	41526970	789624	4	194,159,175,73,	0,317,1212,3119,
#Partially deleted in new
chr15	41523947	41525207	chr15:41523947-41525207	0	-	41523947	41523947	8553170	3	25,159,217,	0,148,1043,
#Deleted in new
chr15	41534804	41536375	chr15:41534804-41536375	0	-	41534804	41534804	8553170	3	131,121,247,	0,707,1324,
#Partially deleted in new
chr15	41535511	41544250	chr15:41535511-41544250	0	-	41535511	41537125	789624	5	121,90,149,257,338,	0,617,989,1433,8401,
#Partially deleted in new
chr15	41536162	41544269	chr15:41536162-41544269	0	-	41536162	41537125	789624	4	56,149,257,83,	0,338,782,8024,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	41536652	41544266	chr15:41536652-41544266	0	-	41536652	41536652	8553170	2	549,48,	0,7566,
#Deleted in new
chr15	41557026	41557435	chr15:41557026-41557435	7	+	41557026	41557026	16724991	2	142,190,	0,219,
#Partially deleted in new
chr15	41557674	41578805	chr15:41557674-41578805	1	+	41561137	41578276	789624	19	798,184,101,171,87,116,178,146,145,130,101,96,81,93,122,110,160,137,920,	0,3452,3864,4873,6509,7351,9685,10542,11203,12352,12565,12929,13363,13920,14768,15327,15633,16004,20211,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr15	41559033	41583586	chr15:41559033-41583586	3	+	41559257	41578276	0	19	348,184,101,171,87,116,178,146,145,130,101,96,81,93,122,110,160,137,5701,	0,2093,2505,3514,5150,5992,8326,9183,9844,10993,11206,11570,12004,12561,13409,13968,14274,14645,18852,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	41559226	41562355	chr15:41559226-41562355	0	+	41559226	41559226	8553170	2	155,1229,	0,1900,
#Partially deleted in new
chr15	41564783	41568265	chr15:41564783-41568265	0	+	41564783	41564783	8553170	3	358,178,49,	0,2576,3433,
#Partially deleted in new
chr15	41567378	41570339	chr15:41567378-41570339	0	+	41567378	41570086	789624	4	159,146,130,100,	0,838,2648,2861,
#Partially deleted in new
chr15	41570676	41577973	chr15:41570676-41577973	0	+	41570676	41577973	789624	9	23,81,93,122,95,160,137,57,88,	0,361,918,1766,2340,2631,3002,3979,7209,
#Partially deleted in new
chr15	41570937	41573377	chr15:41570937-41573377	0	+	41570937	41570937	8553170	5	181,93,122,110,70,	0,657,1505,2064,2370,
#Partially deleted in new
chr15	41571102	41573467	chr15:41571102-41573467	0	+	41571102	41571598	789624	5	16,139,122,110,160,	0,446,1340,1899,2205,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	41577334	41579338	chr15:41577334-41579338	0	+	41577334	41577334	8553170	1	2004,	0,
#Partially deleted in new
chr15	41609465	41612727	chr15:41609465-41612727	3	-	41609465	41609465	8553170	3	451,57,193,	0,678,3069,
#Deleted in new
chr15	41609543	41609924	chr15:41609543-41609924	0	-	41609543	41609543	8553170	1	381,	0,
#Partially deleted in new
chr15	41621223	41696583	chr15:41621223-41696583	0	+	41621223	41621223	8553170	2	75,509,	0,74851,
#Partially deleted in new
chr15	41621535	41713482	chr15:41621535-41713482	0	+	41668894	41713482	789624	9	54,1131,949,79,96,132,105,659,332,	0,47292,74539,77327,77528,86192,86568,89155,91615,
#Partially deleted in new
chr15	41660411	41769943	chr15:41660411-41769943	3	+	41668894	41767280	789624	24	114,1131,949,79,96,132,105,659,346,227,186,73,518,151,627,291,1505,131,52,207,112,234,177,3940,	0,8416,35663,38451,38652,47316,47692,50279,52739,66768,68752,74110,75769,79641,82134,88225,88699,94025,97376,99911,101327,101717,104474,105592,
#Partially deleted in new
chr15	41660411	41769941	chr15:41660411-41769941	1	+	41668894	41767280	789624	23	114,1131,949,79,96,132,105,659,346,227,186,73,518,151,291,1505,131,52,207,112,234,177,3938,	0,8416,35663,38451,38652,47316,47692,50279,52739,66768,68752,74110,75769,79641,88225,88699,94025,97376,99911,101327,101717,104474,105592,
#Partially deleted in new
chr15	41660411	41713324	chr15:41660411-41713324	0	+	41668894	41713324	789624	9	114,1131,949,79,96,132,105,659,174,	0,8416,35663,38451,38652,47316,47692,50279,52739,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr15	41668827	41773081	chr15:41668827-41773081	1	+	41668894	41767280	789624	22	1131,949,79,96,132,105,659,346,227,186,73,518,151,291,1505,131,52,207,112,234,177,7078,	0,27247,30035,30236,38900,39276,41863,44323,58352,60336,65694,67353,71225,79809,80283,85609,88960,91495,92911,93301,96058,97176,
#Partially deleted in new
chr15	41668894	41769941	chr15:41668894-41769941	1	+	41668894	41767280	789624	23	1064,949,79,96,132,105,659,346,227,186,73,518,151,627,291,1505,131,52,207,112,234,177,3938,	0,27180,29968,30169,38833,39209,41796,44256,58285,60269,65627,67286,71158,73651,79742,80216,85542,88893,91428,92844,93234,95991,97109,
#Partially deleted in new
chr15	41669723	41684690	chr15:41669723-41684690	0	+	41669723	41684409	789624	2	235,297,	0,14670,
#Deleted in new
chr15	41691584	41691678	chr15:41691584-41691678	3	+	41691584	41691584	5263520	1	94,	0,
#Deleted in new
chr15	41718369	41718672	chr15:41718369-41718672	7	-	41718369	41718369	16724991	1	303,	0,
#Partially deleted in new
chr15	41734553	41762197	chr15:41734553-41762197	0	+	41734553	41762197	789624	11	41,188,298,627,291,1505,131,52,207,112,69,	0,1627,5352,7992,14083,14557,19883,23234,25769,27185,27575,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	41748730	41752318	chr15:41748730-41752318	0	+	41748730	41748730	8553170	2	197,3208,	0,380,
#Partially deleted in new
chr15	41760127	41762338	chr15:41760127-41762338	0	+	41760127	41760127	8553170	3	402,112,210,	0,1611,2001,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	41769939	41772986	chr15:41769939-41772986	1	+	41770835	41772572	789624	2	1018,478,	0,2569,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	41770755	41772622	chr15:41770755-41772622	3	-	41770755	41770755	8553170	2	208,108,	0,1759,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	41770931	41772732	chr15:41770931-41772732	1	-	41770931	41770931	8553170	2	32,302,	0,1499,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr15	41774433	41827855	chr15:41774433-41827855	3	+	41775275	41825436	789624	31	177,223,92,63,58,171,138,183,161,190,147,176,92,126,71,122,76,112,64,135,134,56,237,167,146,198,85,284,615,86,2647,	0,733,25389,36449,36744,37523,38082,38485,39187,40116,40825,41190,42125,42476,42954,43180,43575,43760,44085,44389,44812,45161,46398,47150,47531,47791,48159,48505,49013,50050,50775,
#Partially deleted in new
chr15	41774433	41825617	chr15:41774433-41825617	0	+	41775275	41815274	789624	30	177,223,92,63,58,171,138,183,161,147,176,92,126,71,122,76,112,64,135,134,56,237,167,146,198,85,284,615,86,409,	0,733,25389,36449,36744,37523,38082,38485,39187,40825,41190,42125,42476,42954,43180,43575,43760,44085,44389,44812,45161,46398,47150,47531,47791,48159,48505,49013,50050,50775,
#Partially deleted in new
chr15	41774492	41825616	chr15:41774492-41825616	0	+	41775275	41811210	789624	29	118,223,63,58,171,138,183,161,190,176,92,126,71,122,76,112,64,135,134,56,237,167,146,198,85,284,615,86,408,	0,674,36390,36685,37464,38023,38426,39128,40057,41131,42066,42417,42895,43121,43516,43701,44026,44330,44753,45102,46339,47091,47472,47732,48100,48446,48954,49991,50716,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr15	41774523	41827853	chr15:41774523-41827853	1	+	41775275	41825436	789624	32	87,223,92,63,58,171,138,183,18,161,190,147,176,92,126,71,122,76,112,64,135,134,56,237,167,146,198,85,284,615,86,2645,	0,643,25299,36359,36654,37433,37992,38395,38806,39097,40026,40735,41100,42035,42386,42864,43090,43485,43670,43995,44299,44722,45071,46308,47060,47441,47701,48069,48415,48923,49960,50685,
#Partially deleted in new
chr15	41774541	41826956	chr15:41774541-41826956	1	+	41775275	41825436	789624	30	69,223,92,63,58,171,138,183,161,190,147,176,92,126,71,122,76,112,64,135,134,56,237,167,146,198,85,68,86,1748,	0,625,25281,36341,36636,37415,37974,38377,39079,40008,40717,41082,42017,42368,42846,43072,43467,43652,43977,44281,44704,45053,46290,47042,47423,47683,48051,48397,49942,50667,
#Partially deleted in new
chr15	41774547	41816618	chr15:41774547-41816618	0	+	41774547	41774547	8553170	11	63,223,92,63,58,171,1266,190,147,176,60,	0,619,25275,36335,36630,37409,37968,40002,40711,41076,42011,
#Partially deleted in new
chr15	41774701	41812098	chr15:41774701-41812098	0	+	41775275	41812098	789624	6	425,128,92,63,58,142,	0,560,25121,36181,36476,37255,
#Partially deleted in new
chr15	41775275	41811210	chr15:41775275-41811210	1	+	41775275	41811210	789624	3	114,63,33,	0,35607,35902,
#Partially deleted in new
chr15	41775310	41826177	chr15:41775310-41826177	0	+	41775310	41775310	8553170	27	79,92,63,58,171,586,161,190,541,92,126,71,122,76,112,64,135,405,237,167,146,198,85,284,615,86,969,	0,24512,35572,35867,36646,37205,38310,39239,39948,41248,41599,42077,42303,42698,42883,43208,43512,43935,45521,46273,46654,46914,47282,47628,48136,49173,49898,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	41775334	41811744	chr15:41775334-41811744	0	+	41775334	41775334	8553170	5	55,92,63,58,276,	0,24488,35548,35843,36134,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	41810691	41812709	chr15:41810691-41812709	0	+	41810691	41810691	8553170	4	254,58,171,194,	0,486,1265,1824,
#Deleted in new
chr15	41810760	41811326	chr15:41810760-41811326	0	+	41810760	41810760	8553170	2	185,149,	0,417,
#Deleted in new
chr15	41816278	41816997	chr15:41816278-41816997	0	+	41816278	41816278	8553170	2	372,88,	0,631,
#Deleted in new
chr15	41821369	41822302	chr15:41821369-41822302	0	+	41821369	41821369	8553170	3	381,146,78,	0,595,855,
#Deleted in new
chr15	41821965	41822812	chr15:41821965-41822812	0	+	41821965	41821965	8553170	3	145,198,220,	0,259,627,
#Deleted in new
chr15	41821972	41822663	chr15:41821972-41822663	0	+	41821972	41821972	8553170	2	138,439,	0,252,
#Deleted in new
chr15	41822649	41823476	chr15:41822649-41823476	0	+	41822649	41822649	8553170	2	573,30,	0,797,
#Partially deleted in new
chr15	41825098	41827936	chr15:41825098-41827936	3	-	41825098	41825098	8553170	3	275,110,200,	0,1315,2638,
#Partially deleted in new
chr15	41826025	41827855	chr15:41826025-41827855	1	-	41826025	41826025	8553170	2	294,219,	0,1611,
#Partially deleted in new
chr15	41828084	41837581	chr15:41828084-41837581	3	+	41828124	41837156	0	8	104,154,254,57,96,77,160,514,	0,6655,6885,7503,8063,8390,8696,8983,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr15	41828094	41848155	chr15:41828094-41848155	0	+	41828094	41828094	8553170	25	94,154,254,57,96,466,3163,137,132,41,43,55,131,399,98,136,137,223,118,138,105,180,167,187,507,	0,6645,6875,7493,8053,8380,8973,12429,12679,12960,13136,13422,13724,14098,15031,15581,16376,16753,17108,17543,17848,18108,18574,19242,19554,
#Partially deleted in new
chr15	41828101	41837452	chr15:41828101-41837452	1	+	41835048	41837156	789624	7	87,330,57,96,77,160,385,	0,6792,7486,8046,8373,8679,8966,
#Partially deleted in new
chr15	41828106	41836551	chr15:41828106-41836551	0	+	41835048	41836551	789624	7	82,108,154,254,57,96,77,	0,287,6633,6863,7481,8041,8368,
#Partially deleted in new
chr15	41828112	41834804	chr15:41828112-41834804	0	+	41828112	41828112	8553170	3	76,189,65,	0,991,6627,
#Partially deleted in new
chr15	41828115	41848143	chr15:41828115-41848143	3	+	41828124	41847860	789624	25	73,154,254,57,96,77,73,137,132,41,43,55,131,84,38,136,137,223,118,138,105,180,167,187,495,	0,6624,6854,7472,8032,8359,12042,12408,12658,12939,13115,13401,13703,14077,14438,15560,16355,16732,17087,17522,17827,18087,18553,19221,19533,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr15	41828115	41848143	chr15:41828115-41848143	0	+	41828115	41828115	8553170	24	73,484,57,96,77,160,3163,137,132,41,43,55,131,84,38,98,136,137,223,573,440,167,187,495,	0,6624,7472,8032,8359,8665,8952,12408,12658,12939,13115,13401,13703,14077,14438,15010,15560,16355,16732,17087,17827,18553,19221,19533,
#Partially deleted in new
chr15	41828116	41847966	chr15:41828116-41847966	1	+	41828124	41847690	789624	24	72,154,254,57,96,77,73,137,132,41,43,55,131,84,38,136,137,223,118,138,105,180,167,318,	0,6623,6853,7471,8031,8358,12041,12407,12657,12938,13114,13400,13702,14076,14437,15559,16354,16731,17086,17521,17826,18086,18552,19532,
#Partially deleted in new
chr15	41832428	41834920	chr15:41832428-41834920	0	+	41832428	41832428	8553170	2	84,181,	0,2311,
#Partially deleted in new
chr15	41835045	41840230	chr15:41835045-41840230	0	+	41835045	41835045	8553170	5	178,57,192,77,73,	0,542,1006,1429,5112,
#Deleted in new
chr15	41836049	41837160	chr15:41836049-41837160	0	+	41836049	41836049	8553170	4	194,77,160,93,	0,425,731,1018,
#Partially deleted in new
chr15	41836784	41848143	chr15:41836784-41848143	0	+	41836784	41837156	789624	20	156,307,206,137,132,41,43,55,131,84,136,137,223,118,138,105,180,167,187,495,	0,283,3240,3739,3989,4270,4446,4732,5034,5408,6891,7686,8063,8418,8853,9158,9418,9884,10552,10864,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr15	41837774	41848147	chr15:41837774-41848147	3	+	41838913	41847860	789624	21	185,176,73,137,132,41,43,55,131,84,38,136,137,223,118,138,105,180,167,187,499,	0,972,2383,2749,2999,3280,3456,3742,4044,4418,4779,5901,6696,7073,7428,7863,8168,8428,8894,9562,9874,
#Partially deleted in new
chr15	41838812	41848147	chr15:41838812-41848147	1	+	41838913	41847860	789624	20	110,73,137,132,41,43,55,131,84,38,136,137,223,118,138,105,180,167,187,499,	0,1345,1711,1961,2242,2418,2704,3006,3380,3741,4863,5658,6035,6390,6825,7130,7390,7856,8524,8836,
#Partially deleted in new
chr15	41838812	41844530	chr15:41838812-41844530	0	+	41838812	41838812	8553170	10	110,73,137,132,41,719,84,38,136,60,	0,1345,1711,1961,2242,2418,3380,3741,4863,5658,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	41841828	41848140	chr15:41841828-41848140	0	+	41841828	41841828	8553170	12	121,1031,136,137,223,118,138,105,180,167,187,492,	0,364,1847,2642,3019,3374,3809,4114,4374,4840,5508,5820,
#Deleted in new
chr15	41845880	41846700	chr15:41845880-41846700	0	+	41845880	41845880	8553170	3	167,180,32,	0,322,788,
#Deleted in new
chr15	41846800	41848032	chr15:41846800-41848032	0	+	41846800	41847860	789624	2	35,229,	0,1003,
#Partially deleted in new
chr15	41848143	41894077	chr15:41848143-41894077	3	-	41848615	41893497	789624	68	485,91,86,92,87,72,135,102,177,190,206,156,195,205,197,213,187,257,138,147,91,173,78,189,163,122,114,115,116,96,192,150,168,105,150,204,180,111,115,146,136,158,117,201,187,215,165,171,100,140,241,288,240,131,153,201,210,201,154,233,139,632,229,158,117,168,265,179,	0,1725,2710,2915,3139,3635,4038,4490,4680,5114,5438,5906,6638,7080,7405,8242,8709,9094,9429,10458,10746,12442,13275,13591,13986,14395,14646,15560,15765,17664,17894,18200,18815,19394,19925,20254,21697,22099,22302,23231,23638,24158,25348,25701,26148,26698,27314,27970,28404,28665,28972,30198,31116,31590,32016,32890,33792,34125,34441,34852,35204,37591,39069,39784,41945,44750,45138,45755,
#Deleted in new
chr15	41848370	41850572	chr15:41848370-41850572	0	-	41848370	41848370	8553170	2	258,704,	0,1498,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	41851912	41852029	chr15:41851912-41852029	7	-	41851912	41851912	16724991	1	117,	0,
#Deleted in new
chr15	41866494	41866551	chr15:41866494-41866551	3	-	41866494	41866494	5263520	1	57,	0,
#Deleted in new
chr15	41892792	41895935	chr15:41892792-41895935	1	+	41892792	41892792	8553170	2	2544,356,	0,2787,
#Partially deleted in new
chr15	41892792	41898575	chr15:41892792-41898575	3	+	41892792	41892792	8553170	4	29,63,30,409,	0,4536,4699,5374,
#Deleted in new
chr15	41894984	41895943	chr15:41894984-41895943	0	+	41894984	41894984	8553170	1	959,	0,
#Deleted in new
chr15	41895184	41895943	chr15:41895184-41895943	1	+	41895184	41895184	8553170	3	152,86,162,	0,399,597,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	41895938	41972578	chr15:41895938-41972578	3	-	41900644	41972494	789624	6	5243,165,413,98,177,320,	0,13760,23271,47128,57825,76320,
#Deleted in new
chr15	41908203	41908714	chr15:41908203-41908714	3	-	41908203	41908203	8553170	1	511,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	41921416	41928883	chr15:41921416-41928883	3	+	41921416	41921416	789624	4	325,87,157,202,	0,4664,6933,7265,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	41941603	41972552	chr15:41941603-41972552	0	-	41941603	41941603	8553170	3	1561,177,294,	0,12160,30655,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	41972762	41999094	chr15:41972762-41999094	3	+	41972762	41972762	789624	4	236,155,152,1956,	0,1041,8542,24376,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr15	41981581	42051190	chr15:41981581-42051190	3	-	41983753	42050703	789624	20	2393,184,167,204,108,138,115,223,137,136,38,84,179,64,43,41,132,137,73,670,	0,2854,4257,5590,6467,7833,8539,11155,13778,15542,17942,18335,18522,19575,21072,23356,24408,26147,32103,68939,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	41981583	41997522	chr15:41981583-41997522	0	-	41981583	41981583	8553170	10	2391,184,167,204,108,138,115,223,137,399,	0,2852,4255,5588,6465,7831,8537,11153,13776,15540,
#Deleted in new
chr15	41986877	41990202	chr15:41986877-41990202	0	-	41986877	41986877	8553170	4	498,108,138,82,	0,1171,2537,3243,
#Deleted in new
chr15	42006131	42010117	chr15:42006131-42010117	3	+	42006131	42006131	8553170	3	81,100,286,	0,2881,3700,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	42067008	42071878	chr15:42067008-42071878	0	-	42067008	42067008	8553170	5	1933,975,195,108,105,	0,2900,4114,4435,4765,
#Partially deleted in new
chr15	42067682	42094554	chr15:42067682-42094554	3	-	42068714	42094459	0	20	1259,187,167,195,108,138,118,223,137,136,38,111,137,64,43,41,132,137,73,140,	0,2226,3034,3440,3761,4091,4592,11854,13314,13796,14114,14596,15515,16033,17413,17808,18530,19617,19945,26732,
#Partially deleted in new
chr15	42081116	42084038	chr15:42081116-42084038	0	-	42081116	42081116	8553170	4	17,111,137,323,	0,1162,2081,2599,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr15	42139033	42156636	chr15:42139033-42156636	3	-	42141983	42156549	789624	20	3171,187,167,195,108,138,115,223,137,136,38,114,170,67,43,41,129,137,73,198,	0,3494,4944,5416,6541,6732,7093,8090,8592,10679,11070,11339,11574,13654,14266,14586,15058,15288,16483,17405,
#Partially deleted in new
chr15	42141197	42145587	chr15:42141197-42145587	0	-	42142661	42145587	789624	4	1007,187,195,13,	0,1330,3252,4377,
#Partially deleted in new
chr15	42141203	42156611	chr15:42141203-42156611	0	-	42154386	42156549	789624	19	1001,187,167,195,108,138,115,223,137,136,38,114,170,67,43,41,129,137,173,	0,1324,2774,3246,4371,4562,4923,5920,6422,8509,8900,9169,9404,11484,12096,12416,12888,13118,15235,
#Partially deleted in new
chr15	42141208	42156618	chr15:42141208-42156618	0	-	42149815	42156549	789624	20	996,187,167,195,108,138,115,223,137,136,38,114,105,67,43,41,129,137,73,180,	0,1319,2769,3241,4366,4557,4918,5915,6417,8504,8895,9164,9399,11479,12091,12411,12883,13113,14308,15230,
#Deleted in new
chr15	42146674	42147733	chr15:42146674-42147733	0	-	42146674	42146674	8553170	2	672,108,	0,951,
#Deleted in new
chr15	42150664	42156609	chr15:42150664-42156609	0	-	42152738	42156549	789624	7	113,67,43,23,94,73,171,	0,2023,2635,2955,3700,4852,5774,
#Deleted in new
chr15	42154121	42156636	chr15:42154121-42156636	0	-	42154496	42156549	789624	4	99,204,73,198,	0,200,1395,2317,
#Partially deleted in new
chr15	42158700	42208316	chr15:42158700-42208316	3	-	42160753	42208153	789624	25	2129,92,135,150,46,103,129,118,99,74,87,142,144,143,130,121,121,184,93,99,95,43,65,66,236,	0,2981,3331,3631,4649,4925,5657,6295,7017,7458,7862,8071,8693,11023,15022,19517,19749,25816,28570,29057,30413,32424,32795,41195,49380,
#Deleted in new
chr15	42158712	42161547	chr15:42158712-42161547	0	-	42158712	42158712	8553170	1	2835,	0,
#Partially deleted in new
chr15	42158715	42166219	chr15:42158715-42166219	0	-	42158715	42158715	8553170	8	2114,92,135,150,46,103,1459,61,	0,2966,3316,3616,4634,4910,5642,7443,
#Deleted in new
chr15	42160430	42162052	chr15:42160430-42162052	0	-	42161559	42162052	789624	4	399,117,92,21,	0,1043,1251,1601,
#Partially deleted in new
chr15	42160753	42208153	chr15:42160753-42208153	1	-	42160753	42208153	789624	26	76,92,135,150,46,103,129,118,99,74,87,142,144,143,130,121,121,184,93,99,95,43,65,33,66,73,	0,928,1278,1578,2596,2872,3604,4242,4964,5405,5809,6018,6640,8970,12969,17464,17696,23763,26517,27004,28360,30371,30742,31312,39142,47327,
#Deleted in new
chr15	42161718	42162557	chr15:42161718-42162557	0	-	42161718	42161718	8553170	2	55,526,	0,313,
#Deleted in new
chr15	42161723	42162672	chr15:42161723-42162672	0	-	42161723	42161723	8553170	3	50,135,341,	0,308,608,
#Deleted in new
chr15	42163560	42164726	chr15:42163560-42164726	0	-	42163560	42163560	8553170	2	168,369,	0,797,
#Deleted in new
chr15	42164604	42165753	chr15:42164604-42165753	0	-	42164604	42164604	8553170	2	509,36,	0,1113,
#Deleted in new
chr15	42164784	42166875	chr15:42164784-42166875	0	-	42164784	42164784	8553170	6	105,118,99,74,87,104,	0,211,933,1374,1778,1987,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	42169850	42179103	chr15:42169850-42179103	0	-	42169850	42169850	8553170	3	16,121,654,	0,8367,8599,
#Partially deleted in new
chr15	42173636	42178338	chr15:42173636-42178338	0	-	42173636	42173636	8553170	2	216,121,	0,4581,
#Partially deleted in new
chr15	42184191	42191170	chr15:42184191-42191170	0	-	42184191	42184191	8553170	5	509,93,99,95,46,	0,3079,3566,4922,6933,
#Partially deleted in new
chr15	42191260	42208307	chr15:42191260-42208307	0	-	42191260	42191260	8553170	3	300,66,227,	0,8635,16820,
#Deleted in new
chr15	42199569	42199666	chr15:42199569-42199666	3	-	42199569	42199569	5263520	1	97,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	42208412	42226990	chr15:42208412-42226990	3	+	42208412	42208412	8553170	5	272,154,35,151,211,	0,351,10506,15995,18367,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	42208618	42211333	chr15:42208618-42211333	0	+	42208618	42208618	8553170	3	66,154,165,	0,145,2550,
#Partially deleted in new
chr15	42210451	42273584	chr15:42210451-42273584	1	-	42211707	42273276	789624	19	1298,31,56,62,74,104,59,109,69,94,100,184,62,118,45,54,114,86,330,	0,7351,7871,9129,9610,16354,17259,18260,20740,22761,25868,26980,29218,33598,50506,50744,53638,57495,62803,
#Partially deleted in new
chr15	42210531	42273663	chr15:42210531-42273663	3	-	42211707	42273398	789624	20	1218,31,56,62,74,104,59,109,69,94,100,184,62,118,45,54,114,86,61,409,	0,7271,7791,9049,9530,16274,17179,18180,20660,22681,25788,26900,29138,33518,50426,50664,53558,57415,61531,62723,
#Partially deleted in new
chr15	42211138	42218006	chr15:42211138-42218006	0	-	42211138	42211138	8553170	2	611,204,	0,6664,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	42226602	42228804	chr15:42226602-42228804	0	-	42226602	42226602	8553170	3	307,59,93,	0,1108,2109,
#Partially deleted in new
chr15	42226804	42237475	chr15:42226804-42237475	0	-	42226804	42237475	789624	7	105,59,109,72,94,100,44,	0,906,1907,5039,6408,9515,10627,
#Partially deleted in new
chr15	42227614	42273433	chr15:42227614-42273433	0	-	42227614	42227614	8553170	14	155,109,69,94,100,184,62,118,45,54,114,86,61,179,	0,1097,3577,5598,8705,9817,12055,16435,33343,33581,36475,40332,44448,45640,
#Partially deleted in new
chr15	42232878	42273432	chr15:42232878-42273432	0	-	42268002	42273398	789624	10	428,100,184,62,118,45,54,114,86,178,	0,3441,4553,6791,11171,28079,28317,31211,35068,40376,
#Partially deleted in new
chr15	42236354	42273078	chr15:42236354-42273078	0	-	42236354	42261231	789624	10	65,184,62,118,45,54,114,86,61,116,	0,1077,3315,7695,24603,24841,27735,31592,35708,36608,
#Partially deleted in new
chr15	42237544	42273023	chr15:42237544-42273023	0	-	42237544	42261231	789624	10	71,62,118,45,54,121,114,86,61,135,	0,2125,6505,23413,23651,24578,26545,30402,34518,35344,
#Partially deleted in new
chr15	42244131	42272860	chr15:42244131-42272860	0	-	42244131	42261231	789624	7	36,45,54,114,86,61,185,	0,16826,17064,19958,23815,27931,28544,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	42257934	42273436	chr15:42257934-42273436	1	-	42258948	42273398	789624	7	1056,45,54,114,86,61,182,	0,3023,3261,6155,10012,14128,15320,
#Partially deleted in new
chr15	42258790	42273078	chr15:42258790-42273078	1	-	42258948	42261231	789624	7	200,45,54,114,86,61,190,	0,2167,2405,5299,9156,13272,14098,
#Deleted in new
chr15	42273232	42274510	chr15:42273232-42274510	0	+	42274481	42274510	789624	2	597,343,	0,935,
#Partially deleted in new
chr15	42273285	42278592	chr15:42273285-42278592	0	+	42274481	42278592	789624	4	159,343,63,111,	0,882,3062,5196,
#Partially deleted in new
chr15	42273294	42292826	chr15:42273294-42292826	0	+	42274481	42292826	789624	6	317,343,63,109,128,92,	0,873,3053,5187,14396,19440,
#Partially deleted in new
chr15	42273657	42314833	chr15:42273657-42314833	1	+	42274481	42314096	789624	12	387,343,63,109,128,183,46,67,97,181,154,754,	0,510,2690,4824,14033,19077,23953,32888,34564,36625,37035,40422,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr15	42274241	42356935	chr15:42274241-42356935	3	+	42274481	42352139	789624	24	269,63,109,128,183,46,67,97,181,154,236,127,80,144,97,102,244,65,77,75,114,113,104,4906,	0,2106,4240,13449,18493,23369,32304,33980,36041,36451,47543,52056,53121,55064,56334,64147,65427,66448,68836,71516,73861,75141,77087,77788,
#Partially deleted in new
chr15	42274241	42284389	chr15:42274241-42284389	1	+	42274481	42284041	789624	5	269,63,109,217,779,	0,2106,4240,6675,9369,
#Partially deleted in new
chr15	42274243	42287722	chr15:42274243-42287722	0	+	42274481	42278046	789624	5	267,63,64,109,32,	0,2104,3781,4238,13447,
#Partially deleted in new
chr15	42274263	42283902	chr15:42274263-42283902	0	+	42274481	42278046	789624	5	247,63,64,109,292,	0,2084,3761,4218,9347,
#Partially deleted in new
chr15	42276271	42281112	chr15:42276271-42281112	0	+	42276271	42276271	8553170	3	139,109,196,	0,2210,4645,
#Partially deleted in new
chr15	42276345	42327495	chr15:42276345-42327495	0	+	42276345	42276345	8553170	12	65,109,128,183,46,67,97,181,154,236,127,133,	0,2136,11345,16389,21265,30200,31876,33937,34347,45439,49952,51017,
#Deleted in new
chr15	42313686	42314386	chr15:42313686-42314386	7	+	42313686	42313686	16724991	2	99,399,	0,301,
#Partially deleted in new
chr15	42326300	42329504	chr15:42326300-42329504	0	+	42326300	42326300	8553170	3	124,80,199,	0,1062,3005,
#Partially deleted in new
chr15	42343341	42352108	chr15:42343341-42352108	0	+	42343341	42343341	8553170	6	70,75,114,113,104,79,	0,2416,4761,6041,7987,8688,
#Partially deleted in new
chr15	42344694	42352078	chr15:42344694-42352078	0	+	42344694	42344694	8553170	6	217,75,114,113,104,49,	0,1063,3408,4688,6634,7335,
#Partially deleted in new
chr15	42348102	42412317	chr15:42348102-42412317	0	+	42348102	42354348	789624	28	114,113,104,95,114,70,278,119,134,169,144,84,86,78,161,170,12,209,37,114,78,58,65,69,79,117,59,571,	0,1280,3226,3927,6237,36380,37576,38064,39650,40825,41850,44536,46153,48697,51389,53538,54021,54691,55638,60108,61200,61684,61828,62325,62485,62781,63184,63644,
#Partially deleted in new
chr15	42348102	42404288	chr15:42348102-42404288	0	+	42348102	42354348	789624	17	114,113,104,95,114,70,119,134,169,144,84,86,78,161,170,879,548,	0,1280,3226,3927,6237,36380,38064,39650,40825,41850,44536,46153,48697,51389,53538,54021,55638,
#Partially deleted in new
chr15	42348102	42412317	chr15:42348102-42412317	1	+	42348102	42354348	789624	26	114,113,104,95,114,70,119,134,169,144,84,86,78,161,170,879,37,114,78,58,65,69,79,117,59,571,	0,1280,3226,3927,6237,36380,38064,39650,40825,41850,44536,46153,48697,51389,53538,54021,55638,60108,61200,61684,61828,62325,62485,62781,63184,63644,
#Partially deleted in new
chr15	42348102	42412317	chr15:42348102-42412317	2	+	42348102	42354348	789624	27	114,113,104,95,114,70,119,134,169,144,84,86,78,161,170,12,209,37,114,78,58,65,69,79,117,59,571,	0,1280,3226,3927,6237,36380,38064,39650,40825,41850,44536,46153,48697,51389,53538,54021,54691,55638,60108,61200,61684,61828,62325,62485,62781,63184,63644,
#Partially deleted in new
chr15	42359499	42412317	chr15:42359499-42412317	1	+	42359805	42411773	789624	23	615,70,119,134,169,84,86,78,161,170,12,209,37,18,114,78,58,65,69,79,117,59,571,	0,24983,26667,28253,29428,33139,34756,37300,39992,42141,42624,43294,44241,46426,48711,49803,50287,50431,50928,51088,51384,51787,52247,
#Partially deleted in new
chr15	42359584	42412317	chr15:42359584-42412317	1	+	42359805	42411773	0	21	530,70,119,134,169,84,86,78,161,170,12,209,37,78,58,65,69,79,117,59,571,	0,24898,26582,28168,29343,33054,34671,37215,39907,42056,42539,43209,44156,49718,50202,50346,50843,51003,51299,51702,52162,
#Partially deleted in new
chr15	42359584	42411773	chr15:42359584-42411773	1	+	42359805	42411773	0	23	530,70,119,134,169,144,84,86,78,161,170,12,209,37,114,78,58,65,69,79,117,59,27,	0,24898,26582,28168,29343,30368,33054,34671,37215,39907,42056,42539,43209,44156,48626,49718,50202,50346,50843,51003,51299,51702,52162,
#Partially deleted in new
chr15	42359586	42412316	chr15:42359586-42412316	3	+	42359805	42411773	0	24	528,70,119,134,169,144,84,86,78,161,170,12,209,37,18,114,78,58,65,69,79,117,59,570,	0,24896,26580,28166,29341,30366,33052,34669,37213,39905,42054,42537,43207,44154,46339,48624,49716,50200,50344,50841,51001,51297,51700,52160,
#Partially deleted in new
chr15	42374207	42411926	chr15:42374207-42411926	0	+	42374207	42374207	8553170	21	324,70,119,134,169,84,86,78,161,170,12,209,37,78,58,65,69,79,117,59,180,	0,10275,11959,13545,14720,18431,20048,22592,25284,27433,27916,28586,29533,35095,35579,35723,36220,36380,36676,37079,37539,
#Partially deleted in new
chr15	42402389	42412317	chr15:42402389-42412317	1	+	42402793	42411773	0	13	169,209,37,18,114,78,58,65,69,79,117,59,571,	0,404,1351,3536,5821,6913,7397,7541,8038,8198,8494,8897,9357,
#Partially deleted in new
chr15	42402417	42411341	chr15:42402417-42411341	0	+	42402793	42411341	789624	10	141,209,37,78,58,65,69,79,117,55,	0,376,1323,6885,7369,7513,8010,8170,8466,8869,
#Partially deleted in new
chr15	42402798	42409963	chr15:42402798-42409963	0	+	42402798	42409963	789624	7	204,37,18,114,99,58,33,	0,942,3127,5412,6483,6988,7132,
#Partially deleted in new
chr15	42404778	42412315	chr15:42404778-42412315	1	+	42409789	42411773	0	9	177,78,58,65,69,79,117,59,569,	0,4524,5008,5152,5649,5809,6105,6508,6968,
#Partially deleted in new
chr15	42404778	42412317	chr15:42404778-42412317	1	+	42409789	42411773	0	9	186,87,58,65,69,79,117,59,571,	0,4515,5008,5152,5649,5809,6105,6508,6968,
#Partially deleted in new
chr15	42404779	42411942	chr15:42404779-42411942	1	+	42409789	42411773	0	11	176,18,114,78,58,65,69,79,117,59,196,	0,1146,3431,4523,5007,5151,5648,5808,6104,6507,6967,
#Partially deleted in new
chr15	42404797	42412317	chr15:42404797-42412317	1	+	42409789	42412217	789624	9	158,78,58,65,69,79,117,59,232,	0,4505,4989,5133,5630,5790,6086,6489,7288,
#Partially deleted in new
chr15	42404826	42408636	chr15:42404826-42408636	0	+	42404826	42404826	8553170	2	129,426,	0,3384,
#Partially deleted in new
chr15	42404830	42412315	chr15:42404830-42412315	1	+	42409789	42411773	0	10	125,18,78,58,65,69,79,117,59,569,	0,1095,4472,4956,5100,5597,5757,6053,6456,6916,
#Partially deleted in new
chr15	42404866	42410911	chr15:42404866-42410911	0	+	42408341	42410911	789624	9	89,18,227,78,58,65,69,79,28,	0,1059,3344,4436,4920,5064,5561,5721,6017,
#Partially deleted in new
chr15	42405931	42411863	chr15:42405931-42411863	0	+	42405931	42410413	789624	10	12,114,78,58,65,89,25,117,59,117,	0,2279,3371,3855,3999,4476,4710,4952,5355,5815,
#Deleted in new
chr15	42408313	42411857	chr15:42408313-42411857	0	+	42408313	42411773	789624	9	11,78,58,65,69,25,117,59,111,	0,989,1473,1617,2114,2328,2570,2973,3433,
#Deleted in new
chr15	42408465	42412318	chr15:42408465-42412318	0	+	42408465	42408465	8553170	8	915,58,65,69,79,117,59,572,	0,1321,1465,1962,2122,2418,2821,3281,
#Deleted in new
chr15	42409786	42411001	chr15:42409786-42411001	0	+	42409786	42409786	8553170	5	58,65,65,79,118,	0,144,645,801,1097,
#Deleted in new
chr15	42410587	42412308	chr15:42410587-42412308	0	+	42410587	42411773	789624	5	79,117,59,233,223,	0,296,699,1159,1498,
#Deleted in new
chr15	42410883	42412247	chr15:42410883-42412247	0	+	42410883	42411773	789624	4	117,59,233,189,	0,403,863,1175,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr15	42412822	42457532	chr15:42412822-42457532	1	-	42417303	42457205	789624	19	4538,147,72,72,120,63,192,117,135,146,56,781,342,61,155,70,634,2184,575,	0,4982,8238,9094,9678,11175,12011,15195,22561,24409,25789,26210,29250,31379,32004,33766,35249,36948,44135,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr15	42415120	42491105	chr15:42415120-42491105	1	-	42417303	42472289	789624	20	2240,147,72,72,120,63,192,117,135,146,56,781,342,61,155,70,634,62,86,126,	0,2684,5940,6796,7380,8877,9713,12897,20263,22111,23491,23912,26952,29081,29706,31468,32951,50932,57115,75859,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr15	42415122	42448298	chr15:42415122-42448298	0	-	42417303	42448298	789624	17	2238,147,72,72,120,63,192,117,135,146,56,520,342,61,155,70,227,	0,2682,5938,6794,7378,8875,9711,12895,20261,22109,23489,23910,26950,29079,29704,31466,32949,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	42415294	42428104	chr15:42415294-42428104	0	-	42415428	42428104	789624	7	182,72,72,120,63,192,87,	0,5766,6622,7206,8703,9539,12723,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr15	42415739	42457513	chr15:42415739-42457513	1	-	42417303	42448692	789624	18	1621,147,72,72,120,63,192,117,135,146,56,781,342,61,155,70,634,297,	0,2065,5321,6177,6761,8258,9094,12278,19644,21492,22872,23293,26333,28462,29087,30849,32332,41477,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr15	42415871	42491141	chr15:42415871-42491141	3	-	42417303	42472289	789624	22	1489,147,72,72,120,63,192,117,135,146,56,781,342,61,155,70,634,2184,201,62,86,162,	0,1933,5189,6045,6629,8126,8962,12146,19512,21360,22740,23161,26201,28330,28955,30717,32200,33899,41086,50181,56364,75108,
#Partially deleted in new
chr15	42417868	42424246	chr15:42417868-42424246	0	-	42417868	42417868	8553170	5	83,72,72,120,249,	0,3192,4048,4632,6129,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	42421957	42424798	chr15:42421957-42424798	0	-	42421957	42421957	8553170	4	31,120,63,522,	0,543,2040,2319,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	42422552	42425781	chr15:42422552-42425781	0	-	42422552	42422552	8553170	4	68,63,192,310,	0,1445,2281,2919,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	42427590	42427697	chr15:42427590-42427697	3	-	42427590	42427590	8553170	1	107,	0,
#Partially deleted in new
chr15	42441740	42446598	chr15:42441740-42446598	0	-	42442064	42446598	789624	4	674,61,155,10,	0,2461,3086,4848,
#Partially deleted in new
chr15	42446625	42457556	chr15:42446625-42457556	0	-	42446625	42451551	789624	4	33,634,2184,340,	0,1446,3145,10591,
#Partially deleted in new
chr15	42451666	42490410	chr15:42451666-42490410	0	-	42451666	42472289	789624	5	288,201,62,86,82,	0,5291,14386,20569,38662,
#Partially deleted in new
chr15	42491232	42513442	chr15:42491232-42513442	0	+	42491232	42491232	8553170	4	63,192,71,488,	0,1521,20600,21722,
#Partially deleted in new
chr15	42491243	42528370	chr15:42491243-42528370	0	+	42511846	42528370	789624	7	91,85,71,42,49,118,109,	0,1617,20589,21711,22155,23993,37018,
#Partially deleted in new
chr15	42491298	42513125	chr15:42491298-42513125	0	+	42491298	42491298	8553170	4	272,85,71,171,	0,1562,20534,21656,
#Partially deleted in new
chr15	42492841	42528343	chr15:42492841-42528343	0	+	42511846	42521641	789624	7	116,71,42,49,118,95,82,	0,18991,20113,20557,22395,28772,35420,
#Partially deleted in new
chr15	42492870	42531545	chr15:42492870-42531545	0	+	42511846	42513398	789624	8	75,71,42,112,118,159,145,133,	0,18962,20084,20465,22366,35391,36804,38542,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	42495259	42533061	chr15:42495259-42533061	3	+	42511846	42531478	0	8	454,71,42,49,118,159,145,1649,	0,16573,17695,18139,19977,33002,34415,36153,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	42495305	42533059	chr15:42495305-42533059	1	+	42511846	42531478	0	7	408,71,42,49,118,145,1647,	0,16527,17649,18093,19931,34369,36107,
#Partially deleted in new
chr15	42495633	42531827	chr15:42495633-42531827	1	+	42511846	42531530	789624	6	80,71,42,49,118,415,	0,16199,17321,17765,19603,35779,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	42495633	42505688	chr15:42495633-42505688	0	+	42495633	42495633	8553170	2	80,567,	0,9488,
#Partially deleted in new
chr15	42495641	42522095	chr15:42495641-42522095	1	+	42511846	42521641	789624	6	72,71,42,49,118,482,	0,16191,17313,17757,19595,25972,
#Partially deleted in new
chr15	42495643	42529804	chr15:42495643-42529804	0	+	42513428	42529804	789624	6	70,42,49,118,159,130,	0,17311,17755,19593,32618,34031,
#Partially deleted in new
chr15	42495643	42528373	chr15:42495643-42528373	0	+	42511846	42521641	789624	7	70,71,42,49,118,95,112,	0,16189,17311,17755,19593,25970,32618,
#Partially deleted in new
chr15	42495650	42512364	chr15:42495650-42512364	0	+	42495650	42495650	8553170	2	63,532,	0,16182,
#Partially deleted in new
chr15	42495652	42513398	chr15:42495652-42513398	1	+	42511846	42513398	789624	4	61,71,42,63,	0,16180,17302,17683,
#Partially deleted in new
chr15	42495652	42513209	chr15:42495652-42513209	1	+	42511846	42513209	789624	4	61,71,42,36,	0,16180,17302,17521,
#Partially deleted in new
chr15	42495677	42529820	chr15:42495677-42529820	0	+	42511846	42513209	789624	7	36,71,42,274,118,159,146,	0,16155,17277,17496,19559,32584,33997,
#Partially deleted in new
chr15	42495708	42528323	chr15:42495708-42528323	0	+	42511846	42528323	789624	6	223,71,42,49,118,62,	0,16124,17246,17690,19528,32553,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	42497393	42532081	chr15:42497393-42532081	3	-	42497393	42497393	8553170	4	1356,70,175,1167,	0,17729,30933,33521,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	42497394	42548786	chr15:42497394-42548786	3	-	42530979	42548434	8553170	9	1355,70,175,155,186,269,139,106,94,	0,17728,30932,33520,47682,49866,50711,50956,51298,
#Partially deleted in new
chr15	42511832	42531444	chr15:42511832-42531444	0	+	42511832	42511832	8553170	6	71,493,118,159,145,32,	0,1122,3404,16429,17842,19580,
#Partially deleted in new
chr15	42511846	42531478	chr15:42511846-42531478	1	+	42511846	42531478	0	6	57,42,49,118,145,66,	0,1108,1552,3390,17828,19566,
#Partially deleted in new
chr15	42513409	42545347	chr15:42513409-42545347	0	+	42513409	42545250	789624	3	38,118,212,	0,1827,31726,
#Partially deleted in new
chr15	42515236	42545356	chr15:42515236-42545356	0	+	42515236	42545250	789624	4	118,159,145,148,	0,13025,14438,29972,
#Partially deleted in new
chr15	42515236	42545345	chr15:42515236-42545345	0	+	42515236	42545162	789624	4	118,159,145,210,	0,13025,14438,29899,
#Partially deleted in new
chr15	42527942	42531651	chr15:42527942-42531651	0	+	42527942	42527942	8553170	3	478,145,239,	0,1732,3470,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	42531866	42532840	chr15:42531866-42532840	0	-	42531866	42531866	8553170	2	335,511,	0,463,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	42537819	42548802	chr15:42537819-42548802	3	-	42544082	42548434	789624	5	6305,186,269,139,452,	0,7257,9441,10286,10531,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	42542521	42548773	chr15:42542521-42548773	1	-	42544082	42548434	789624	6	1603,186,269,139,106,81,	0,2555,4739,5584,5829,6171,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	42542523	42548772	chr15:42542523-42548772	1	-	42544082	42548434	789624	6	1601,186,269,139,106,106,	0,2553,4737,5582,5827,6143,
#Partially deleted in new
chr15	42543966	42545449	chr15:42543966-42545449	0	-	42543966	42543966	8553170	2	158,373,	0,1110,
#Partially deleted in new
chr15	42544042	42548793	chr15:42544042-42548793	0	-	42544042	42544042	8553170	5	82,186,984,106,101,	0,1034,3218,4308,4650,
#Deleted in new
chr15	42547307	42548793	chr15:42547307-42548793	0	-	42547307	42548434	789624	4	222,139,106,94,	0,798,1043,1392,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	42548809	42569994	chr15:42548809-42569994	3	+	42548872	42566816	789624	6	156,93,70,133,109,3388,	0,9388,10529,12460,14939,17797,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	42548827	42567858	chr15:42548827-42567858	1	+	42548872	42566816	789624	5	138,70,133,109,1252,	0,10511,12442,14921,17779,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	42548837	42568930	chr15:42548837-42568930	0	+	42548872	42561299	789624	6	128,70,89,133,109,2324,	0,10501,11944,12432,14911,17769,
#Partially deleted in new
chr15	42548837	42566733	chr15:42548837-42566733	0	+	42548872	42561299	789624	5	128,93,133,109,127,	0,9360,12432,14911,17769,
#Partially deleted in new
chr15	42548866	42567096	chr15:42548866-42567096	0	+	42548872	42563780	789624	5	99,93,70,109,490,	0,9331,10472,14882,17740,
#Partially deleted in new
chr15	42559383	42561687	chr15:42559383-42561687	0	+	42559383	42561412	789624	2	25,418,	0,1886,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	42567030	42569994	chr15:42567030-42569994	0	-	42567030	42567030	8553170	2	109,433,	0,2531,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	42569297	42569994	chr15:42569297-42569994	3	-	42569297	42569297	8553170	2	168,394,	0,303,
#Partially deleted in new
chr15	42571926	42572433	chr15:42571926-42572433	7	+	42571926	42571926	16724991	1	507,	0,
#Partially deleted in new
chr15	42575658	42720981	chr15:42575658-42720981	3	+	42575715	42719574	789624	33	104,70,117,117,33,62,113,70,73,68,98,210,98,78,63,180,52,138,83,104,191,472,10227,198,184,138,88,122,65,203,80,159,1509,	0,7687,9862,59197,62248,62367,63041,75357,76861,85499,87135,87622,88161,89594,90127,93499,98781,99168,100005,100213,105763,106445,108457,118869,119481,120084,141018,141268,142072,142318,142776,143093,143814,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr15	42575658	42673114	chr15:42575658-42673114	0	+	42575658	42575658	8553170	14	104,70,117,117,33,62,113,70,73,68,1124,78,63,3957,	0,7687,9862,59197,62248,62367,63041,75357,76861,85499,87135,89594,90127,93499,
#Partially deleted in new
chr15	42575669	42638151	chr15:42575669-42638151	0	+	42575669	42575669	8553170	6	93,70,114,117,33,126,	0,7676,9851,59186,62237,62356,
#Deleted in new
chr15	42581155	42581488	chr15:42581155-42581488	7	-	42581155	42581155	16724991	1	333,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	42629841	42670050	chr15:42629841-42670050	0	+	42629841	42629841	8553170	11	305,117,33,62,113,70,73,68,98,637,893,	0,5014,8065,8184,8858,21174,22678,31316,32952,33439,39316,
#Partially deleted in new
chr15	42665806	42681587	chr15:42665806-42681587	0	+	42665806	42681587	789624	7	42,180,39,52,83,104,166,	0,3351,8118,8633,9857,10065,15615,
#Partially deleted in new
chr15	42675495	42682213	chr15:42675495-42682213	0	+	42675495	42675495	8553170	4	251,104,191,110,	0,376,5926,6608,
#Partially deleted in new
chr15	42689594	42720859	chr15:42689594-42720859	0	+	42689594	42694472	789624	10	4748,266,184,138,88,122,65,80,159,1387,	0,4865,5545,6148,27082,27332,28136,28840,29157,29878,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr15	42723543	42737128	chr15:42723543-42737128	3	-	42724490	42737102	789624	28	1073,108,182,64,108,149,79,64,159,104,134,55,90,88,167,147,121,206,76,90,110,121,79,114,170,204,479,116,	0,1600,1945,2553,2766,4077,4411,4660,5108,5479,5685,6024,6252,6584,7054,7381,7667,8076,8789,9553,10394,10682,11556,11717,11966,12331,12758,13469,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr15	42723558	42730764	chr15:42723558-42730764	0	-	42726415	42730764	789624	15	1058,108,182,64,108,102,79,64,159,104,134,55,90,88,167,	0,1585,1930,2538,2751,4109,4396,4645,5093,5464,5670,6009,6237,6569,7039,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	42723561	42725637	chr15:42723561-42725637	0	-	42723561	42723561	8553170	1	2076,	0,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr15	42723582	42737119	chr15:42723582-42737119	0	-	42735946	42737102	789624	25	1034,108,182,108,102,79,64,159,104,134,55,90,88,167,147,121,206,76,90,110,79,114,170,207,107,	0,1561,1906,2727,4085,4372,4621,5069,5440,5646,5985,6213,6545,7015,7342,7628,8037,8750,9514,10355,11517,11678,11927,12292,13430,
#Partially deleted in new
chr15	42724101	42724922	chr15:42724101-42724922	3	+	42724101	42724101	8553170	1	821,	0,
#Partially deleted in new
chr15	42724894	42725539	chr15:42724894-42725539	0	-	42724894	42724894	8553170	2	357,51,	0,594,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	42726582	42727211	chr15:42726582-42727211	3	+	42726582	42726582	8553170	1	629,	0,
#Deleted in new
chr15	42736561	42737054	chr15:42736561-42737054	0	-	42736561	42737054	789624	2	219,66,	0,427,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr15	42738733	42920479	chr15:42738733-42920479	3	-	42745794	42878617	789624	15	7524,1274,589,212,217,158,126,93,66,105,141,74,148,136,42,	0,13240,36401,38297,44685,55910,71880,72954,78298,89194,91204,101626,133877,139815,181704,
#Partially deleted in new
chr15	42739117	42742197	chr15:42739117-42742197	3	+	42739117	42739117	8553170	3	118,111,196,	0,2335,2884,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	42740747	42743202	chr15:42740747-42743202	1	+	42740747	42740747	8553170	2	816,1201,	0,1254,
#Partially deleted in new
chr15	42744351	42920809	chr15:42744351-42920809	1	-	42745794	42878558	789624	18	1906,1274,589,212,217,158,19,471,785,126,93,66,105,141,73,148,136,372,	0,7622,30783,32679,39067,50292,53900,56615,57270,66262,67336,72680,83576,85586,96008,128259,134197,176086,
#Partially deleted in new
chr15	42776917	42920809	chr15:42776917-42920809	1	-	42777002	42878617	789624	12	325,217,158,126,93,66,105,141,74,148,136,372,	0,6501,17726,33696,34770,40114,51010,53020,63442,95693,101631,143520,
#Partially deleted in new
chr15	42776949	42920762	chr15:42776949-42920762	1	-	42777002	42878617	789624	11	293,217,158,126,93,66,141,74,148,136,325,	0,6469,17694,33664,34738,40082,52988,63410,95661,101599,143488,
#Deleted in new
chr15	42800967	42802405	chr15:42800967-42802405	7	-	42800967	42800967	16724991	1	1438,	0,
#Partially deleted in new
chr15	42827976	42920761	chr15:42827976-42920761	0	-	42827976	42878617	789624	5	56,141,86,136,324,	0,1961,44634,50572,92461,
#Partially deleted in new
chr15	42829969	42920638	chr15:42829969-42920638	0	-	42829969	42878617	789624	4	109,74,136,201,	0,10390,48579,90468,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	42855118	42919788	chr15:42855118-42919788	0	-	42855118	42855118	8553170	5	82,122,67,136,30,	0,2276,17492,23430,64640,
#Partially deleted in new
chr15	42939309	42940358	chr15:42939309-42940358	7	-	42939309	42939309	16724991	1	1049,	0,
#Partially deleted in new
chr15	42942896	43106101	chr15:42942896-43106101	3	-	42945328	43106022	0	47	2574,102,171,78,57,109,134,88,151,68,97,56,149,91,98,150,94,206,182,87,101,100,155,49,103,53,125,64,102,66,111,62,181,129,100,158,99,89,108,124,63,139,131,111,79,257,160,	0,7365,9381,15116,17748,21038,23256,27623,33820,34983,41000,41990,45922,47133,55271,59658,60940,64182,72791,74198,78378,79805,81932,82484,83664,84879,87047,89671,93281,93631,94876,95274,100318,104264,105495,111845,113447,115444,116188,116805,117155,125001,127898,132082,139741,143087,163045,
#Partially deleted in new
chr15	42945186	42950574	chr15:42945186-42950574	0	-	42945186	42945186	8553170	2	284,313,	0,5075,
#Partially deleted in new
chr15	42988492	42998199	chr15:42988492-42998199	0	-	42988492	42988492	8553170	3	475,91,32,	0,1537,9675,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	43003253	43015869	chr15:43003253-43015869	0	-	43003253	43003253	8553170	4	133,94,206,182,	0,583,3825,12434,
#Partially deleted in new
chr15	43015655	43106113	chr15:43015655-43106113	1	-	43015683	43106022	789624	29	214,87,101,100,155,49,103,53,125,64,102,66,111,62,181,129,100,158,99,89,108,124,63,139,131,111,79,257,172,	0,1439,5619,7046,9173,9725,10905,12120,14288,16912,20522,20872,22117,22515,27559,31505,32736,39086,40688,42685,43429,44046,44396,52242,55139,59323,66982,70328,90286,
#Partially deleted in new
chr15	43021080	43026663	chr15:43021080-43026663	0	-	43021265	43026663	789624	5	295,100,155,49,103,	0,1621,3748,4300,5480,
#Partially deleted in new
chr15	43021084	43027805	chr15:43021084-43027805	0	-	43024958	43027805	789624	6	291,100,155,56,103,30,	0,1617,3744,4289,5476,6691,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	43021084	43037829	chr15:43021084-43037829	0	-	43026630	43037829	789624	9	291,100,155,1290,125,64,102,66,57,	0,1617,3744,4289,8859,11483,15093,15443,16688,
#Partially deleted in new
chr15	43043213	43059804	chr15:43043213-43059804	0	-	43056434	43059804	789624	6	182,129,100,99,108,103,	0,3947,5178,13130,15871,16488,
#Partially deleted in new
chr15	43043343	43106088	chr15:43043343-43106088	0	-	43082701	43106022	789624	6	52,129,27,111,79,147,	0,3817,27555,31635,39294,62598,
#Duplicated in new
chr15	43082710	43106107	chr15:43082710-43106107	0	-	43091972	43106022	789624	4	6,257,120,166,	0,3273,9250,23231,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	43091972	43106022	chr15:43091972-43106022	1	-	43091972	43106022	789624	2	108,81,	0,13969,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	43106224	43185779	chr15:43106224-43185779	3	-	43106224	43106224	8553170	6	71,70,52,175,94,11,	0,243,2694,24743,73620,79544,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	43109927	43110018	chr15:43109927-43110018	7	+	43109927	43109927	16724991	2	42,45,	0,46,
#Deleted in new
chr15	43115701	43116493	chr15:43115701-43116493	7	-	43115701	43115701	16724991	1	792,	0,
#Partially deleted in new
chr15	43123278	43149064	chr15:43123278-43149064	0	+	43135609	43149064	789624	6	84,138,46,142,125,36,	0,12233,15295,23214,25476,25750,
#Partially deleted in new
chr15	43131007	43131686	chr15:43131007-43131686	7	+	43131007	43131007	16724991	1	679,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	43133143	43148788	chr15:43133143-43148788	0	+	43135609	43146575	789624	4	259,138,142,34,	0,2368,13349,15611,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	43133161	43146521	chr15:43133161-43146521	0	+	43135609	43146521	789624	5	241,112,138,46,29,	0,1095,2350,5412,13331,
#Partially deleted in new
chr15	43133523	43185146	chr15:43133523-43185146	3	+	43133802	43184586	789624	14	459,112,138,46,142,125,123,156,160,114,85,105,119,887,	0,733,1988,5050,12969,15231,15505,18266,21148,27157,36069,45083,47657,50736,
#Partially deleted in new
chr15	43133718	43146590	chr15:43133718-43146590	0	+	43133802	43135520	789624	3	264,138,98,	0,1793,12774,
#Partially deleted in new
chr15	43133841	43151834	chr15:43133841-43151834	0	+	43133841	43135520	789624	5	141,138,125,44,45,	0,1670,14913,15266,17948,
#Partially deleted in new
chr15	43133841	43135782	chr15:43133841-43135782	0	+	43133841	43133841	8553170	3	141,112,271,	0,415,1670,
#Partially deleted in new
chr15	43133842	43151890	chr15:43133842-43151890	0	+	43133842	43135520	789624	5	140,138,125,123,101,	0,1669,14912,15186,17947,
#Partially deleted in new
chr15	43133925	43146607	chr15:43133925-43146607	0	+	43133925	43135520	789624	4	57,138,46,115,	0,1586,4648,12567,
#Partially deleted in new
chr15	43134281	43184989	chr15:43134281-43184989	0	+	43134281	43184586	789624	12	87,138,46,142,125,123,156,160,114,85,119,730,	0,1230,4292,12211,14473,14747,17508,20390,26399,35311,46899,49978,
#Partially deleted in new
chr15	43146122	43149136	chr15:43146122-43149136	0	+	43146122	43146122	8553170	3	512,125,108,	0,2632,2906,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	43160322	43169853	chr15:43160322-43169853	0	+	43160322	43160322	8553170	2	472,261,	0,9270,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	43160393	43185089	chr15:43160393-43185089	0	+	43160393	43160393	8553170	5	401,85,105,119,830,	0,9199,18213,20787,23866,
#Partially deleted in new
chr15	43169014	43184385	chr15:43169014-43184385	0	+	43169014	43169014	8553170	5	139,85,105,119,126,	0,578,9592,12166,15245,
#Partially deleted in new
chr15	43179792	43206481	chr15:43179792-43206481	3	-	43179792	43179792	8553170	4	146,134,161,152,	0,22051,23322,26537,
#Partially deleted in new
chr15	43180660	43184468	chr15:43180660-43184468	0	+	43180660	43180660	8553170	2	639,209,	0,3599,
#Deleted in new
chr15	43184078	43185141	chr15:43184078-43185141	3	-	43184078	43184078	8553170	2	392,140,	0,923,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	43185117	43193306	chr15:43185117-43193306	0	+	43185117	43185117	8553170	8	490,414,82,97,74,77,281,564,	0,702,4081,4937,5207,5848,6277,7625,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	43185256	43197176	chr15:43185256-43197176	3	+	43185498	43194841	0	11	351,60,80,82,97,74,77,281,61,47,2450,	0,563,897,3942,4798,5068,5709,6138,7486,9158,9470,
#Partially deleted in new
chr15	43185327	43195164	chr15:43185327-43195164	0	+	43185498	43194089	0	12	280,60,80,82,97,74,77,281,61,57,47,438,	0,492,826,3871,4727,4997,5638,6067,7415,8753,9087,9399,
#Partially deleted in new
chr15	43185404	43195160	chr15:43185404-43195160	0	+	43185498	43189218	789624	9	203,82,97,74,77,281,61,47,434,	0,3794,4650,4920,5561,5990,7338,9010,9322,
#Partially deleted in new
chr15	43185405	43195195	chr15:43185405-43195195	0	+	43185498	43189218	789624	10	202,60,82,97,74,77,281,61,47,469,	0,414,3793,4649,4919,5560,5989,7337,9009,9321,
#Partially deleted in new
chr15	43185408	43191675	chr15:43185408-43191675	0	+	43185498	43189218	789624	5	199,82,74,77,281,	0,3790,4916,5557,5986,
#Partially deleted in new
chr15	43185438	43195195	chr15:43185438-43195195	0	+	43185498	43194089	0	11	169,60,80,82,97,74,77,281,61,381,469,	0,381,715,3760,4616,4886,5527,5956,7304,8642,9288,
#Partially deleted in new
chr15	43185438	43189466	chr15:43185438-43189466	0	+	43185438	43185438	8553170	4	169,60,80,268,	0,381,715,3760,
#Partially deleted in new
chr15	43185438	43195180	chr15:43185438-43195180	0	+	43185498	43190989	789624	10	169,60,80,82,74,77,281,61,47,454,	0,381,715,3760,4886,5527,5956,7304,8976,9288,
#Partially deleted in new
chr15	43185445	43191675	chr15:43185445-43191675	0	+	43185498	43189218	789624	6	162,60,82,74,77,281,	0,374,3753,4879,5520,5949,
#Partially deleted in new
chr15	43185919	43194461	chr15:43185919-43194461	0	+	43185919	43185919	8553170	7	314,82,74,77,281,61,47,	0,3279,4405,5046,5475,6823,8495,
#Partially deleted in new
chr15	43185939	43195192	chr15:43185939-43195192	0	+	43185939	43185939	8553170	9	294,82,97,74,77,281,61,47,466,	0,3259,4115,4385,5026,5455,6803,8475,8787,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	43188451	43193356	chr15:43188451-43193356	0	+	43188451	43188451	8553170	5	1700,74,77,281,614,	0,1873,2514,2943,4291,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	43189261	43193335	chr15:43189261-43193335	0	+	43189261	43189261	8553170	4	1137,77,281,593,	0,1704,2133,3481,
#Deleted in new
chr15	43194183	43195198	chr15:43194183-43195198	0	+	43194183	43194183	8553170	2	278,472,	0,543,
#Partially deleted in new
chr15	43197226	43221051	chr15:43197226-43221051	3	-	43197301	43220825	789624	13	238,134,161,300,243,104,139,178,105,119,234,186,326,	0,4617,5888,9103,9972,11003,11410,12047,13108,14189,17868,19041,23499,
#Partially deleted in new
chr15	43197226	43221018	chr15:43197226-43221018	1	-	43197301	43220825	8553170	13	238,134,161,300,243,104,139,178,105,119,234,186,293,	0,4617,5888,9103,9972,11003,11410,12047,13108,14189,17868,19041,23499,
#Partially deleted in new
chr15	43197229	43221051	chr15:43197229-43221051	1	-	43197301	43220825	789624	13	235,134,161,300,243,104,139,178,105,119,234,186,236,	0,4614,5885,9100,9969,11000,11407,12044,13105,14186,17865,19038,23586,
#Partially deleted in new
chr15	43197229	43221009	chr15:43197229-43221009	1	-	43197301	43220825	789624	12	235,134,161,300,243,104,139,178,105,119,186,194,	0,4614,5885,9100,9969,11000,11407,12044,13105,14186,19038,23586,
#Partially deleted in new
chr15	43197234	43221125	chr15:43197234-43221125	1	-	43197301	43220825	789624	12	230,134,161,300,131,139,178,105,119,234,186,310,	0,4609,5880,9095,9964,11402,12039,13100,14181,17860,19033,23581,
#Partially deleted in new
chr15	43197264	43209611	chr15:43197264-43209611	0	-	43197264	43197264	8553170	8	200,134,161,300,243,104,139,338,	0,4579,5850,9065,9934,10965,11372,12009,
#Partially deleted in new
chr15	43205991	43207239	chr15:43205991-43207239	0	-	43206228	43207239	789624	2	638,41,	0,1207,
#Partially deleted in new
chr15	43208289	43215188	chr15:43208289-43215188	0	-	43208289	43215188	789624	5	44,139,178,119,94,	0,347,984,3126,6805,
#Partially deleted in new
chr15	43232594	43266857	chr15:43232594-43266857	3	-	43233190	43266849	789624	13	750,134,161,369,240,104,139,178,129,119,246,180,18,	0,959,2174,2874,6222,6568,8257,20164,20911,23973,27457,27805,34245,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr15	43232594	43260683	chr15:43232594-43260683	1	-	43233190	43260683	789624	13	750,134,161,369,240,104,139,178,129,119,246,180,7,	0,959,2174,2874,6222,6568,8257,20164,20911,23973,27457,27805,28082,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	43232594	43260683	chr15:43232594-43260683	1	-	43233190	43260683	789624	12	750,134,161,369,240,104,139,178,129,119,180,7,	0,959,2174,2874,6222,6568,8257,20164,20911,23973,27805,28082,
#Partially deleted in new
chr15	43233157	43266857	chr15:43233157-43266857	1	-	43233190	43266849	789624	12	187,134,161,369,240,104,139,178,129,119,180,18,	0,396,1611,2311,5659,6005,7694,19601,20348,23410,27242,33682,
#Partially deleted in new
chr15	43233157	43260600	chr15:43233157-43260600	1	-	43233190	43260597	789624	13	187,134,161,369,240,104,139,178,129,119,246,181,15,	0,396,1611,2311,5659,6005,7694,19601,20348,23410,26894,27242,27428,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	43233176	43239743	chr15:43233176-43239743	0	-	43233176	43233176	8553170	6	168,134,161,369,240,581,	0,377,1592,2292,5640,5986,
#Partially deleted in new
chr15	43239052	43241250	chr15:43239052-43241250	0	-	43239052	43239052	8553170	2	214,234,	0,1964,
#Partially deleted in new
chr15	43239211	43253658	chr15:43239211-43253658	0	-	43239211	43239211	8553170	4	55,139,178,153,	0,1640,13547,14294,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	43247679	43247781	chr15:43247679-43247781	3	+	43247679	43247679	8553170	1	102,	0,
#Deleted in new
chr15	43267903	43268388	chr15:43267903-43268388	7	-	43267903	43267903	16724991	1	485,	0,
#Partially deleted in new
chr15	43276279	43302255	chr15:43276279-43302255	3	-	43276454	43302250	789624	13	335,134,161,327,243,104,139,178,129,119,246,183,15,	0,582,2837,3345,5564,6237,8534,11000,11261,15699,16429,17169,25961,
#Deleted in new
chr15	43276279	43277007	chr15:43276279-43277007	0	-	43276279	43276279	8553170	2	335,146,	0,582,
#Deleted in new
chr15	43302095	43302772	chr15:43302095-43302772	3	+	43302095	43302095	8553170	2	122,343,	0,334,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	43323648	43330605	chr15:43323648-43330605	3	-	43328428	43330489	789624	1	6957,	0,
#Deleted in new
chr15	43328285	43330582	chr15:43328285-43330582	1	-	43329617	43330489	789624	2	1360,185,	0,2112,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr15	43330656	43352550	chr15:43330656-43352550	1	+	43335107	43351945	789624	13	203,101,124,226,131,61,88,82,127,81,139,101,800,	0,1243,2654,4288,5039,5969,9608,12337,15197,16359,18250,20284,21094,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	43330673	43353898	chr15:43330673-43353898	3	+	43335107	43351945	789624	12	186,101,124,226,131,61,88,82,127,139,101,2148,	0,1226,2637,4271,5022,5952,9591,12320,15180,18233,20267,21077,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	43330726	43349412	chr15:43330726-43349412	1	+	43335107	43349077	789624	10	133,124,226,131,61,88,82,127,81,506,	0,2584,4218,4969,5899,9538,12267,15127,16289,18180,
#Deleted in new
chr15	43330824	43332383	chr15:43330824-43332383	0	+	43330824	43330824	8553170	2	35,484,	0,1075,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	43331974	43345877	chr15:43331974-43345877	0	+	43335737	43340283	789624	6	26,124,131,88,82,24,	0,1336,3721,8290,11019,13879,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	43334937	43354555	chr15:43334937-43354555	1	+	43335107	43351945	789624	9	233,131,61,88,82,127,139,101,2805,	0,758,1688,5327,8056,10916,13969,16003,16813,
#Partially deleted in new
chr15	43334937	43349077	chr15:43334937-43349077	1	+	43335107	43349077	789624	8	233,131,61,88,82,127,81,171,	0,758,1688,5327,8056,10916,12078,13969,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	43345906	43353309	chr15:43345906-43353309	0	+	43345906	43351059	789624	3	74,139,2369,	0,3000,5034,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	43358171	43370048	chr15:43358171-43370048	3	-	43361072	43369913	789624	5	3770,468,699,205,453,	0,5743,7938,10751,11424,
#Partially deleted in new
chr15	43361017	43370062	chr15:43361017-43370062	1	-	43364479	43369671	789624	6	924,573,665,205,7,457,	0,2897,5092,7905,8578,8588,
#Partially deleted in new
chr15	43361017	43370062	chr15:43361017-43370062	0	-	43366697	43369913	789624	5	924,573,665,205,467,	0,2897,5092,7905,8578,
#Partially deleted in new
chr15	43361072	43369910	chr15:43361072-43369910	1	-	43361746	43369910	789624	5	869,257,699,205,315,	0,3053,5037,7850,8523,
#Partially deleted in new
chr15	43361072	43369910	chr15:43361072-43369910	1	-	43361072	43369910	789624	3	869,205,315,	0,7850,8523,
#Partially deleted in new
chr15	43363748	43369676	chr15:43363748-43369676	0	-	43364479	43369676	789624	4	739,699,205,81,	0,2361,5174,5847,
#Partially deleted in new
chr15	43369220	43376624	chr15:43369220-43376624	0	+	43369220	43369220	8553170	4	191,102,129,122,	0,380,6877,7282,
#Deleted in new
chr15	43369850	43371025	chr15:43369850-43371025	0	-	43369850	43369913	789624	2	175,468,	0,707,
#Deleted in new
chr15	43369997	43370907	chr15:43369997-43370907	0	-	43369997	43369997	8553170	2	351,350,	0,560,
#Partially deleted in new
chr15	43371072	43377903	chr15:43371072-43377903	0	+	43371354	43376496	789624	5	360,129,171,54,57,	0,5025,5382,5941,6774,
#Partially deleted in new
chr15	43371100	43405573	chr15:43371100-43405573	1	+	43371354	43405214	0	18	332,129,123,54,57,80,202,166,125,51,106,108,142,178,135,117,140,372,	0,4997,5402,5913,6746,8983,12202,14690,15105,24006,24482,26113,26937,28943,30615,32582,33312,34101,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr15	43371114	43409771	chr15:43371114-43409771	3	+	43371354	43405214	0	18	318,129,123,54,57,80,202,166,125,51,106,108,139,178,135,117,140,4570,	0,4983,5388,5899,6732,8969,12188,14676,15091,23992,24468,26099,26926,28929,30601,32568,33298,34087,
#Partially deleted in new
chr15	43376539	43405319	chr15:43376539-43405319	0	+	43376539	43399127	789624	17	86,54,57,80,202,166,125,51,106,108,142,63,178,135,117,140,118,	0,474,1307,3544,6763,9251,9666,18567,19043,20674,21498,22572,23504,25176,27143,27873,28662,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	43377597	43383504	chr15:43377597-43383504	0	+	43377597	43377597	8553170	3	306,80,202,	0,2486,5705,
#Partially deleted in new
chr15	43377891	43385916	chr15:43377891-43385916	0	+	43377891	43385385	789624	5	12,80,202,141,126,	0,2192,5411,7476,7899,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	43391383	43391727	chr15:43391383-43391727	3	-	43391383	43391383	8553170	1	344,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	43394080	43405323	chr15:43394080-43405323	0	+	43394080	43394080	8553170	7	1608,108,139,178,2084,140,122,	0,3133,3960,5963,7635,10332,11121,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	43397209	43398383	chr15:43397209-43398383	0	+	43397209	43397209	8553170	2	112,343,	0,831,
#Partially deleted in new
chr15	43398129	43405544	chr15:43398129-43405544	0	+	43398129	43405214	789624	5	50,178,135,140,343,	0,1914,3586,6283,7072,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	43401805	43407060	chr15:43401805-43407060	0	+	43401805	43406616	789624	4	45,117,140,460,	0,1877,2607,4795,
#Partially deleted in new
chr15	43401817	43405328	chr15:43401817-43405328	0	+	43401817	43404420	789624	4	33,160,140,127,	0,1865,2595,3384,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr15	43403060	43493171	chr15:43403060-43493171	1	-	43407382	43493043	0	28	4510,146,200,95,216,216,192,431,150,272,153,484,93,58,204,120,1327,209,95,130,167,130,159,128,85,94,185,135,	0,4882,5836,6586,10058,12533,13164,17244,17964,18794,24955,29133,35263,38465,43326,44305,52831,66797,71612,72504,74532,76336,76798,77834,88608,88941,89223,89976,
#Partially deleted in new
chr15	43407208	43510614	chr15:43407208-43510614	3	-	43407382	43492460	0	28	362,146,200,95,216,216,192,431,150,272,153,484,93,58,204,120,1327,209,95,130,167,130,159,128,85,94,185,245,	0,734,1688,2438,5910,8385,9016,13096,13816,14646,20807,24985,31115,34317,39178,40157,48683,62649,67464,68356,70384,72188,72650,73686,84460,84793,85075,103161,
#Partially deleted in new
chr15	43407213	43493105	chr15:43407213-43493105	1	-	43407382	43493043	789624	27	357,146,200,95,216,216,192,431,272,153,484,93,58,204,120,1327,209,95,130,167,130,159,128,85,94,185,69,	0,729,1683,2433,5905,8380,9011,13091,14641,20802,24980,31110,34312,39173,40152,48678,62644,67459,68351,70379,72183,72645,73681,84455,84788,85070,85823,
#Partially deleted in new
chr15	43407213	43456331	chr15:43407213-43456331	0	-	43446897	43456331	789624	18	357,146,200,95,216,216,192,431,150,272,153,484,93,58,204,149,120,440,	0,729,1683,2433,5905,8380,9011,13091,13811,14641,20802,24980,31110,34312,39173,39552,40152,48678,
#Partially deleted in new
chr15	43407213	43417216	chr15:43407213-43417216	0	-	43407213	43407213	8553170	7	357,146,200,95,216,216,992,	0,729,1683,2433,5905,8380,9011,
#Partially deleted in new
chr15	43407215	43493127	chr15:43407215-43493127	1	-	43407382	43493043	0	28	355,146,200,95,210,216,192,431,150,272,153,484,93,58,204,120,1327,209,95,130,167,130,159,128,85,94,185,91,	0,727,1681,2431,5903,8378,9009,13089,13809,14639,20800,24978,31108,34310,39171,40150,48676,62642,67457,68349,70377,72181,72643,73679,84453,84786,85068,85821,
#Deleted in new
chr15	43409009	43413286	chr15:43409009-43413286	0	-	43409009	43413286	789624	4	87,95,96,168,	0,637,3662,4109,
#Partially deleted in new
chr15	43413268	43420374	chr15:43413268-43420374	0	-	43414102	43420374	789624	5	66,69,216,192,70,	0,779,2325,2956,7036,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr15	43415221	43493156	chr15:43415221-43493156	0	-	43415221	43415221	8553170	23	588,192,431,150,272,153,484,93,58,204,120,1327,209,95,130,167,130,159,128,85,94,185,120,	0,1003,5083,5803,6633,12794,16972,23102,26304,31165,32144,40670,54636,59451,60343,62371,64175,64637,65673,76447,76780,77062,77815,
#Partially deleted in new
chr15	43415721	43421057	chr15:43415721-43421057	0	-	43415721	43415721	8553170	4	88,192,118,33,	0,503,4896,5303,
#Partially deleted in new
chr15	43421089	43438407	chr15:43421089-43438407	0	-	43428107	43438407	789624	4	85,272,153,84,	0,765,6926,17234,
#Partially deleted in new
chr15	43421671	43428116	chr15:43421671-43428116	0	-	43421793	43428116	789624	2	455,101,	0,6344,
#Partially deleted in new
chr15	43432648	43493086	chr15:43432648-43493086	0	-	43432648	43493043	789624	16	29,93,58,204,1327,209,95,130,167,130,159,128,85,94,185,50,	0,5675,8877,13738,23243,37209,42024,42916,44944,46748,47210,48246,59020,59353,59635,60388,
#Partially deleted in new
chr15	43441258	43456152	chr15:43441258-43456152	0	-	43441258	43441258	8553170	2	325,261,	0,14633,
#Partially deleted in new
chr15	43446532	43456178	chr15:43446532-43456178	0	-	43446532	43446532	8553170	4	58,145,120,287,	0,233,833,9359,
#Partially deleted in new
chr15	43447154	43456024	chr15:43447154-43456024	0	-	43447154	43447154	8553170	2	331,133,	0,8737,
#Partially deleted in new
chr15	43497437	43510728	chr15:43497437-43510728	0	-	43497437	43497437	8553170	2	101,359,	0,12932,
#Partially deleted in new
chr15	43510957	43531620	chr15:43510957-43531620	1	+	43510988	43530224	789624	7	269,102,83,141,8185,221,1552,	0,1232,9683,10014,10366,18692,19111,
#Deleted in new
chr15	43517624	43531620	chr15:43517624-43531620	3	+	43521473	43530224	789624	6	76,83,141,8185,221,1552,	0,3016,3347,3699,12025,12444,
#Partially deleted in new
chr15	43533461	43590201	chr15:43533461-43590201	3	-	43534673	43584504	789624	29	2015,114,138,126,91,165,117,108,115,128,224,142,183,122,132,83,110,76,87,102,122,162,102,155,86,91,196,264,30,	0,6008,25333,31405,35001,37950,38262,39307,39572,39895,40347,40760,42909,43365,43646,43991,44160,44414,44608,45557,47540,47765,48391,48633,49102,49400,49942,50896,56710,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr15	43533461	43584504	chr15:43533461-43584504	1	-	43534673	43584504	789624	28	2015,120,114,138,91,165,117,108,115,128,224,142,183,122,132,83,110,76,87,102,122,162,102,155,86,91,196,147,	0,2673,6008,25333,35001,37950,38262,39307,39572,39895,40347,40760,42909,43365,43646,43991,44160,44414,44608,45557,47540,47765,48391,48633,49102,49400,49942,50896,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr15	43533461	43590175	chr15:43533461-43590175	1	-	43534673	43584504	789624	30	2015,120,114,138,91,165,117,108,115,128,224,142,183,122,132,83,110,76,87,102,122,162,102,155,86,91,196,175,94,4,	0,2673,6008,25333,35001,37950,38262,39307,39572,39895,40347,40760,42909,43365,43646,43991,44160,44414,44608,45557,47540,47765,48391,48633,49102,49400,49942,50896,51337,56710,
#Partially deleted in new
chr15	43533461	43590175	chr15:43533461-43590175	1	-	43534673	43584504	789624	30	2015,114,138,126,91,165,117,108,115,128,224,142,183,122,132,83,110,76,87,102,122,162,102,155,86,91,196,175,94,4,	0,6008,25333,31405,35001,37950,38262,39307,39572,39895,40347,40760,42909,43365,43646,43991,44160,44414,44608,45557,47540,47765,48391,48633,49102,49400,49942,50896,51337,56710,
#Partially deleted in new
chr15	43533461	43584864	chr15:43533461-43584864	1	-	43534673	43584504	789624	30	2015,114,138,63,126,91,165,117,108,115,128,224,142,183,122,132,83,110,76,87,102,122,162,102,155,86,91,196,175,66,	0,6008,25333,30641,31405,35001,37950,38262,39307,39572,39895,40347,40760,42909,43365,43646,43991,44160,44414,44608,45557,47540,47765,48391,48633,49102,49400,49942,50896,51337,
#Partially deleted in new
chr15	43533461	43584892	chr15:43533461-43584892	1	-	43534673	43584504	789624	30	2015,114,138,63,126,91,165,117,108,127,128,224,142,183,122,132,83,110,76,87,102,122,162,102,155,86,91,196,175,94,	0,6008,25333,30641,31405,35001,37950,38262,39307,39572,39895,40347,40760,42909,43365,43646,43991,44160,44414,44608,45557,47540,47765,48391,48633,49102,49400,49942,50896,51337,
#Partially deleted in new
chr15	43533461	43590253	chr15:43533461-43590253	1	-	43534673	43584504	789624	31	2015,114,138,63,126,91,165,117,108,127,128,224,142,183,122,132,83,110,76,87,102,122,162,102,155,86,91,196,175,94,82,	0,6008,25333,30641,31405,35001,37950,38262,39307,39572,39895,40347,40760,42909,43365,43646,43991,44160,44414,44608,45557,47540,47765,48391,48633,49102,49400,49942,50896,51337,56710,
#Partially deleted in new
chr15	43533474	43590201	chr15:43533474-43590201	1	-	43534673	43584504	789624	30	2002,114,138,63,126,91,165,117,108,55,128,224,142,183,122,132,83,110,76,87,102,122,162,102,155,86,91,196,175,30,	0,5995,25320,30628,31392,34988,37937,38249,39294,39559,39882,40334,40747,42896,43352,43633,43978,44147,44401,44595,45544,47527,47752,48378,48620,49089,49387,49929,50883,56697,
#Partially deleted in new
chr15	43539482	43573883	chr15:43539482-43573883	0	-	43539482	43573883	789624	12	101,138,183,126,91,150,165,117,108,115,128,75,	0,19312,20930,25384,28980,29703,31929,32241,33286,33551,33874,34326,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	43548406	43568516	chr15:43548406-43568516	0	-	43548406	43548406	8553170	4	277,138,126,54,	0,10388,16460,20056,
#Partially deleted in new
chr15	43558829	43571497	chr15:43558829-43571497	0	-	43558829	43571497	789624	5	103,183,126,91,86,	0,1583,6037,9633,12582,
#Partially deleted in new
chr15	43564866	43573435	chr15:43564866-43573435	0	-	43564866	43573435	789624	7	126,91,165,117,108,115,55,	0,3596,6545,6857,7902,8167,8514,
#Partially deleted in new
chr15	43569067	43584892	chr15:43569067-43584892	0	-	43569067	43569067	8553170	25	268,165,117,108,115,128,224,142,183,122,132,83,110,76,87,102,122,162,102,155,86,91,196,175,94,	0,2344,2656,3701,3966,4289,4741,5154,7303,7759,8040,8385,8554,8808,9002,9951,11934,12159,12785,13027,13496,13794,14336,15290,15731,
#Partially deleted in new
chr15	43571460	43573182	chr15:43571460-43573182	0	-	43571460	43571460	8553170	3	116,117,414,	0,263,1308,
#Partially deleted in new
chr15	43573112	43590190	chr15:43573112-43590190	0	-	43573112	43573112	8553170	20	372,224,142,183,122,132,83,110,76,87,102,122,162,102,155,86,91,196,264,19,	0,696,1109,3258,3714,3995,4340,4509,4763,4957,5906,7889,8114,8740,8982,9451,9749,10291,11245,17059,
#Deleted in new
chr15	43573839	43574635	chr15:43573839-43574635	0	-	43573839	43573839	8553170	2	193,414,	0,382,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	43576167	43576948	chr15:43576167-43576948	0	-	43576167	43576167	8553170	2	386,122,	0,659,
#Partially deleted in new
chr15	43579073	43582192	chr15:43579073-43582192	0	-	43581273	43582192	789624	5	47,122,203,102,98,	0,1928,2153,2779,3021,
#Deleted in new
chr15	43581687	43582217	chr15:43581687-43582217	0	-	43581687	43581687	8553170	2	267,123,	0,407,
#Partially deleted in new
chr15	43582749	43584452	chr15:43582749-43584452	0	-	43582749	43582749	8553170	3	203,196,95,	0,654,1608,
#Partially deleted in new
chr15	43582895	43590155	chr15:43582895-43590155	0	-	43582895	43584504	789624	5	57,196,175,94,274,	0,508,1462,1903,6986,
#Partially deleted in new
chr15	43583403	43590184	chr15:43583403-43590184	0	-	43583403	43584504	789624	4	196,232,94,13,	0,954,1395,6768,
#Partially deleted in new
chr15	43583403	43589942	chr15:43583403-43589942	0	-	43583403	43584504	789624	4	196,175,94,41,	0,954,1395,6498,
#Partially deleted in new
chr15	43583531	43590196	chr15:43583531-43590196	0	-	43583531	43584504	789624	3	68,175,25,	0,826,6640,
#Partially deleted in new
chr15	43593053	43599406	chr15:43593053-43599406	3	+	43594218	43599273	0	10	218,323,199,96,222,86,124,135,126,250,	0,991,1918,2320,2802,3153,3354,5139,5773,6103,
#Deleted in new
chr15	43593053	43596264	chr15:43593053-43596264	0	+	43594218	43596264	789624	6	218,323,199,96,222,58,	0,991,1918,2320,2802,3153,
#Deleted in new
chr15	43593062	43595412	chr15:43593062-43595412	0	+	43594218	43595412	789624	4	209,185,199,39,	0,1120,1909,2311,
#Deleted in new
chr15	43593086	43594422	chr15:43593086-43594422	0	+	43593086	43593086	8553170	2	185,378,	0,958,
#Deleted in new
chr15	43593207	43595107	chr15:43593207-43595107	0	+	43593207	43593207	8553170	3	64,323,413,	0,837,1487,
#Deleted in new
chr15	43593600	43595018	chr15:43593600-43595018	0	+	43594218	43595018	789624	3	79,323,140,	0,444,1278,
#Deleted in new
chr15	43593602	43595132	chr15:43593602-43595132	0	+	43594218	43595132	789624	3	109,323,161,	0,442,1369,
#Partially deleted in new
chr15	43593858	43599406	chr15:43593858-43599406	1	+	43594218	43599273	0	9	509,199,96,222,86,124,135,126,250,	0,1113,1515,1997,2348,2549,4334,4968,5298,
#Deleted in new
chr15	43594018	43594944	chr15:43594018-43594944	0	+	43594018	43594018	8553170	2	349,250,	0,676,
#Deleted in new
chr15	43594018	43595925	chr15:43594018-43595925	0	+	43594018	43594018	8553170	4	349,199,96,26,	0,953,1355,1881,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	43594026	43599406	chr15:43594026-43599406	0	+	43594218	43597396	789624	9	341,199,96,222,86,124,952,126,250,	0,945,1347,1829,2180,2381,3349,4800,5130,
#Deleted in new
chr15	43594026	43595927	chr15:43594026-43595927	0	+	43594218	43595927	789624	4	341,292,96,72,	0,852,1347,1829,
#Deleted in new
chr15	43594027	43596008	chr15:43594027-43596008	0	+	43594218	43595401	789624	3	340,96,109,	0,1346,1872,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	43594041	43597396	chr15:43594041-43597396	1	+	43594218	43597396	789624	7	326,199,96,222,86,124,21,	0,930,1332,1814,2165,2366,3334,
#Partially deleted in new
chr15	43599391	43604901	chr15:43599391-43604901	0	+	43599391	43599391	8553170	2	142,118,	0,5392,
#Partially deleted in new
chr15	43599562	43618800	chr15:43599562-43618800	3	-	43599671	43618722	789624	29	198,148,98,149,143,156,170,157,91,197,136,113,124,59,126,66,168,39,183,133,116,187,167,117,63,1258,25,786,142,	0,397,633,971,1309,1833,3679,4433,4798,5087,5701,8300,8517,9713,10749,11356,11585,11936,12279,12814,13228,13482,14324,14633,14851,15870,17895,18008,19096,
#Partially deleted in new
chr15	43599562	43618800	chr15:43599562-43618800	1	-	43599671	43615456	789624	27	198,148,98,149,143,156,170,157,91,197,136,113,124,59,75,39,183,133,116,262,167,117,63,1258,25,786,142,	0,397,633,971,1309,1833,3679,4433,4798,5087,5701,8300,8517,9713,10749,11936,12279,12814,13228,13482,14324,14633,14851,15870,17895,18008,19096,
#Partially deleted in new
chr15	43599589	43613105	chr15:43599589-43613105	0	-	43599589	43599589	8553170	20	171,148,98,149,143,156,170,157,91,197,171,136,113,124,59,1004,39,69,108,61,	0,370,606,944,1282,1806,3652,4406,4771,5060,5387,5674,8273,8490,9686,10722,11909,12252,13209,13455,
#Partially deleted in new
chr15	43599601	43613187	chr15:43599601-43613187	0	-	43599601	43599601	8553170	13	159,148,98,149,143,156,113,124,59,1004,39,183,143,	0,358,594,932,1270,1794,8261,8478,9674,10710,11897,12240,13443,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr15	43599601	43613214	chr15:43599601-43613214	0	-	43599601	43599601	8553170	17	159,148,98,149,143,156,170,157,91,197,113,124,2040,39,183,116,170,	0,358,594,932,1270,1794,3640,4394,4759,5048,8261,8478,9674,11897,12240,13189,13443,
#Partially deleted in new
chr15	43599632	43618798	chr15:43599632-43618798	0	-	43611972	43618722	789624	28	128,148,98,149,143,156,157,91,197,171,136,113,124,59,126,66,168,39,183,116,262,167,117,63,1258,25,786,140,	0,327,563,901,1239,1763,4363,4728,5017,5344,5631,8230,8447,9643,10679,11286,11515,11866,12209,13158,13412,14254,14563,14781,15800,17825,17938,19026,
#Partially deleted in new
chr15	43599632	43618798	chr15:43599632-43618798	0	-	43615567	43618722	789624	28	128,148,98,149,143,156,170,157,91,197,136,113,124,59,75,39,183,133,116,262,167,117,63,137,179,25,786,140,	0,327,563,901,1239,1763,3609,4363,4728,5017,5631,8230,8447,9643,10679,11866,12209,12744,13158,13412,14254,14563,14781,15800,16879,17825,17938,19026,
#Deleted in new
chr15	43600562	43601675	chr15:43600562-43601675	0	-	43600562	43600562	8553170	3	120,143,280,	0,309,833,
#Partially deleted in new
chr15	43600998	43603582	chr15:43600998-43603582	0	-	43600998	43600998	8553170	3	16,156,341,	0,397,2243,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	43602542	43602648	chr15:43602542-43602648	3	+	43602542	43602542	8553170	1	106,	0,
#Partially deleted in new
chr15	43604703	43613235	chr15:43604703-43613235	0	-	43611972	43613235	789624	9	143,136,113,124,59,39,183,116,191,	0,560,3159,3376,4572,6795,7138,8087,8341,
#Deleted in new
chr15	43611193	43613025	chr15:43611193-43613025	0	-	43611193	43611193	8553170	4	122,39,183,227,	0,305,648,1605,
#Deleted in new
chr15	43611198	43613020	chr15:43611198-43613020	0	-	43611198	43611198	8553170	4	117,39,183,230,	0,300,643,1592,
#Partially deleted in new
chr15	43614207	43632283	chr15:43614207-43632283	3	-	43618999	43632283	789624	9	105,63,137,179,25,786,112,192,85,	0,206,1225,2304,3250,3363,4451,4677,17991,
#Partially deleted in new
chr15	43615126	43618240	chr15:43615126-43618240	0	-	43615393	43618240	789624	3	1564,25,670,	0,2331,2444,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr15	43628502	43648884	chr15:43628502-43648884	3	-	43630700	43648061	789624	13	2230,165,218,57,100,179,125,156,173,69,174,147,256,	0,3696,4214,6857,7224,7538,10401,11140,11821,18547,18791,19414,20126,
#Partially deleted in new
chr15	43630561	43648845	chr15:43630561-43648845	1	-	43630700	43648834	789624	13	171,165,212,57,100,179,125,156,173,69,174,150,24,	0,1637,2155,4798,5165,5479,8342,9081,9762,16488,16732,17355,18260,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	43630570	43632737	chr15:43630570-43632737	0	-	43631500	43632737	789624	4	162,109,165,21,	0,859,1628,2146,
#Partially deleted in new
chr15	43630573	43648844	chr15:43630573-43648844	1	-	43630700	43648061	789624	14	159,165,212,57,100,179,125,156,173,69,174,150,81,27,	0,1625,2143,4786,5153,5467,8330,9069,9750,16476,16720,17343,18055,18244,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	43630605	43648877	chr15:43630605-43648877	0	-	43630605	43630605	8553170	10	127,3218,179,125,156,173,69,174,147,249,	0,1593,5435,8298,9037,9718,16444,16688,17311,18023,
#Partially deleted in new
chr15	43630607	43648061	chr15:43630607-43648061	0	-	43632296	43648061	789624	11	125,165,57,100,179,125,156,173,69,174,145,	0,1591,4752,5119,5433,8296,9035,9716,16442,16686,17309,
#Partially deleted in new
chr15	43632198	43635392	chr15:43632198-43635392	0	-	43635147	43635392	789624	4	165,218,46,33,	0,518,2910,3161,
#Deleted in new
chr15	43632270	43633219	chr15:43632270-43633219	0	-	43632270	43632270	8553170	2	93,503,	0,446,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	43637631	43637738	chr15:43637631-43637738	3	-	43637631	43637631	8553170	1	107,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	43639421	43648847	chr15:43639421-43648847	0	-	43639421	43639421	8553170	5	1075,69,174,147,219,	0,7628,7872,8495,9207,
#Deleted in new
chr15	43642388	43643023	chr15:43642388-43643023	3	-	43642388	43642388	8553170	1	635,	0,
#Partially deleted in new
chr15	43647348	43667702	chr15:43647348-43667702	0	-	43647348	43647348	8553170	3	119,126,45,	0,17069,20309,
#Deleted in new
chr15	43647373	43648825	chr15:43647373-43648825	0	-	43647373	43648061	789624	3	94,150,8,	0,543,1444,
#Partially deleted in new
chr15	43647419	43668118	chr15:43647419-43668118	0	-	43647419	43648061	789624	5	48,150,153,126,91,	0,497,2307,16998,20608,
#Deleted in new
chr15	43649122	43649280	chr15:43649122-43649280	7	+	43649122	43649122	16724991	1	158,	0,
#Partially deleted in new
chr15	43663653	43684339	chr15:43663653-43684339	7	-	43663653	43663653	16724991	26	63,126,91,165,117,108,115,128,224,142,183,122,132,83,110,76,87,102,122,162,102,155,86,91,196,147,	0,764,4374,7323,7635,8680,8945,9268,9720,10133,12282,12738,13019,13364,13533,13787,13981,14936,17183,17408,18034,18276,18745,19043,19585,20539,
#Partially deleted in new
chr15	43692885	43699222	chr15:43692885-43699222	3	+	43694050	43699089	0	10	218,323,199,96,222,86,124,135,126,250,	0,991,1918,2320,2802,3153,3354,5128,5755,6087,
#Deleted in new
chr15	43692899	43695301	chr15:43692899-43695301	0	+	43694050	43695301	789624	4	204,260,199,96,	0,1040,1904,2306,
#Deleted in new
chr15	43693039	43695280	chr15:43693039-43695280	0	+	43694050	43694587	789624	4	64,323,476,75,	0,837,1487,2166,
#Partially deleted in new
chr15	43693526	43699222	chr15:43693526-43699222	1	+	43694050	43699089	0	9	673,199,96,222,86,124,135,126,250,	0,1277,1679,2161,2512,2713,4487,5114,5446,
#Deleted in new
chr15	43693870	43695815	chr15:43693870-43695815	0	+	43694050	43695815	789624	4	329,292,96,128,	0,840,1335,1817,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	43693874	43697217	chr15:43693874-43697217	1	+	43694050	43697217	789624	7	325,199,96,222,86,124,21,	0,929,1331,1813,2164,2365,3322,
#Deleted in new
chr15	43695131	43695849	chr15:43695131-43695849	0	+	43695131	43695131	8553170	2	170,162,	0,556,
#Deleted in new
chr15	43695796	43696971	chr15:43695796-43696971	0	+	43695796	43695796	8553170	3	113,86,732,	0,242,443,
#Partially deleted in new
chr15	43699487	43718184	chr15:43699487-43718184	7	-	43699487	43699487	16724991	29	89,148,98,149,143,156,170,157,91,197,136,113,124,59,126,66,168,39,183,133,116,187,167,117,63,1258,25,786,64,	0,288,524,864,1202,1726,3264,3988,4353,4642,5254,7849,8066,9260,10296,10903,11122,11473,11816,12351,12765,13019,13861,14170,14388,15407,17432,17545,18633,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	43702362	43702470	chr15:43702362-43702470	3	+	43702362	43702362	8553170	1	108,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	43726917	43728789	chr15:43726917-43728789	5	-	43726917	43726917	16724991	2	295,124,	0,1748,
#Partially deleted in new
chr15	43727180	43745165	chr15:43727180-43745165	7	-	43727180	43727180	16724991	12	32,165,210,58,100,179,119,156,173,69,174,144,	0,1485,2002,4636,5022,5336,8249,8974,9655,16970,17214,17841,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	43734178	43734285	chr15:43734178-43734285	3	-	43734178	43734178	8553170	1	107,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	43735933	43746302	chr15:43735933-43746302	4	-	43735933	43735933	16724991	4	1075,174,149,255,	0,8461,9088,10114,
#Partially deleted in new
chr15	43736797	43746285	chr15:43736797-43746285	4	-	43736797	43736797	16724991	4	211,174,146,72,	0,7597,8224,9416,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	43743812	43747094	chr15:43743812-43747094	5	-	43743812	43743812	16724991	3	756,146,564,	0,1209,2718,
#Partially deleted in new
chr15	43746391	43773279	chr15:43746391-43773279	3	+	43746539	43771218	0	13	315,79,118,108,130,117,126,183,109,129,80,58,2175,	0,7432,10257,15032,16685,19058,19495,20336,22097,23126,23858,24131,24713,
#Partially deleted in new
chr15	43746409	43756725	chr15:43746409-43756725	0	+	43746409	43746409	8553170	2	297,77,	0,10239,
#Partially deleted in new
chr15	43746452	43771545	chr15:43746452-43771545	0	+	43746539	43751632	789624	14	254,175,79,118,108,130,117,126,183,109,129,80,58,441,	0,5131,7371,10196,14971,16624,18997,19434,20275,22036,23065,23797,24070,24652,
#Partially deleted in new
chr15	43746452	43756766	chr15:43746452-43756766	0	+	43746539	43752862	789624	4	254,145,79,118,	0,6349,7371,10196,
#Partially deleted in new
chr15	43746611	43768495	chr15:43746611-43768495	0	+	43746611	43765529	789624	7	95,79,118,117,126,183,7,	0,7212,10037,18838,19275,20116,21877,
#Partially deleted in new
chr15	43770282	43771545	chr15:43770282-43771545	0	+	43770282	43770282	8553170	2	298,441,	0,822,
#Partially deleted in new
chr15	43772599	43777543	chr15:43772599-43777543	3	-	43773115	43776901	789624	11	627,45,172,43,178,76,86,202,113,36,774,	0,704,1582,1876,1996,2706,2925,3122,3439,3909,4170,
#Partially deleted in new
chr15	43772604	43776383	chr15:43772604-43776383	0	-	43772604	43772604	8553170	9	622,45,172,43,178,76,86,202,345,	0,699,1577,1871,1991,2701,2920,3117,3434,
#Partially deleted in new
chr15	43772616	43799133	chr15:43772616-43799133	3	-	43796880	43799133	789624	17	607,45,172,43,178,76,86,202,113,36,154,49,73,127,96,94,175,	0,687,1565,1859,1979,2689,2908,3105,3422,3892,22771,23071,23538,23999,24228,25303,26342,
#Partially deleted in new
chr15	43772900	43775505	chr15:43772900-43775505	0	-	43772900	43772900	8553170	6	326,45,172,43,178,200,	0,403,1281,1575,1695,2405,
#Partially deleted in new
chr15	43774711	43776440	chr15:43774711-43776440	0	-	43774711	43774711	8553170	6	62,76,86,202,113,43,	0,594,813,1010,1327,1686,
#Deleted in new
chr15	43775491	43776966	chr15:43775491-43776966	0	-	43775491	43775491	8553170	5	119,202,113,36,197,	0,230,547,1017,1278,
#Deleted in new
chr15	43775537	43776572	chr15:43775537-43776572	0	-	43775537	43775537	8553170	4	73,202,113,64,	0,184,501,971,
#Deleted in new
chr15	43775564	43777315	chr15:43775564-43777315	0	-	43775564	43777142	789624	6	46,202,113,36,195,200,	0,157,474,944,1205,1551,
#Deleted in new
chr15	43776169	43776968	chr15:43776169-43776968	0	-	43776169	43776169	8553170	2	375,199,	0,600,
#Partially deleted in new
chr15	43777099	43794595	chr15:43777099-43794595	3	+	43792376	43793773	789624	5	403,125,408,109,886,	0,8310,14876,15875,16610,
#Deleted in new
chr15	43791841	43794595	chr15:43791841-43794595	1	+	43792376	43793773	789624	3	542,109,886,	0,1133,1868,
#Partially deleted in new
chr15	43791841	43799079	chr15:43791841-43799079	1	+	43792376	43799079	789624	3	542,109,211,	0,1133,7027,
#Partially deleted in new
chr15	43792329	43799850	chr15:43792329-43799850	1	+	43792376	43799079	789624	4	54,109,164,232,	0,645,6614,7289,
#Deleted in new
chr15	43792329	43794444	chr15:43792329-43794444	1	+	43792376	43793972	789624	3	54,109,869,	0,645,1246,
#Deleted in new
chr15	43792329	43793950	chr15:43792329-43793950	0	+	43792329	43792329	8553170	2	54,976,	0,645,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	43792336	43796089	chr15:43792336-43796089	0	+	43792376	43793773	789624	4	47,109,227,1716,	0,638,1373,2037,
#Deleted in new
chr15	43792346	43794046	chr15:43792346-43794046	1	+	43792376	43793972	789624	3	37,109,360,	0,628,1340,
#Partially deleted in new
chr15	43792346	43800279	chr15:43792346-43800279	1	+	43793009	43799673	789624	3	37,109,661,	0,628,7272,
#Partially deleted in new
chr15	43792353	43801873	chr15:43792353-43801873	0	+	43792376	43800501	789624	6	30,109,290,56,52,163,	0,621,8141,8778,9164,9357,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	43792353	43802589	chr15:43792353-43802589	0	+	43792376	43799079	789624	7	30,109,239,1427,56,52,879,	0,621,6515,7004,8778,9164,9357,
#Deleted in new
chr15	43792367	43793975	chr15:43792367-43793975	1	+	43793009	43793773	789624	3	211,109,266,	0,607,1342,
#Deleted in new
chr15	43792367	43794046	chr15:43792367-43794046	1	+	43793009	43793773	789624	3	244,109,337,	0,607,1342,
#Deleted in new
chr15	43792367	43793422	chr15:43792367-43793422	0	+	43792367	43792367	8553170	2	244,448,	0,607,
#Partially deleted in new
chr15	43792376	43799007	chr15:43792376-43799007	0	+	43793009	43799007	789624	3	235,109,139,	0,598,6492,
#Deleted in new
chr15	43792838	43794046	chr15:43792838-43794046	1	+	43793009	43793773	789624	2	245,337,	0,871,
#Deleted in new
chr15	43793658	43793759	chr15:43793658-43793759	3	-	43793658	43793658	5263520	1	101,	0,
#Partially deleted in new
chr15	43794161	43800132	chr15:43794161-43800132	1	-	43795052	43799986	789624	10	1052,154,49,73,212,94,80,179,177,248,	0,1226,1526,1993,2983,3758,4263,4797,5148,5723,
#Partially deleted in new
chr15	43794161	43800221	chr15:43794161-43800221	3	-	43794999	43799986	789624	12	1052,154,49,73,127,96,212,94,80,179,177,337,	0,1226,1526,1993,2454,2683,2983,3758,4263,4797,5148,5723,
#Partially deleted in new
chr15	43794161	43799133	chr15:43794161-43799133	0	-	43796693	43799133	789624	10	1052,154,49,73,127,96,216,94,80,175,	0,1226,1526,1993,2454,2683,2979,3758,4263,4797,
#Partially deleted in new
chr15	43794161	43800097	chr15:43794161-43800097	0	-	43799338	43799986	789624	11	1052,154,49,73,127,96,94,80,179,218,213,	0,1226,1526,1993,2454,2683,3758,4263,4797,5148,5723,
#Partially deleted in new
chr15	43794229	43799127	chr15:43794229-43799127	0	-	43796221	43799127	789624	6	984,154,49,73,94,169,	0,1158,1458,1925,3690,4729,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	43796141	43802082	chr15:43796141-43802082	3	+	43800598	43801806	0	5	4007,290,56,52,372,	0,4353,4990,5376,5569,
#Partially deleted in new
chr15	43796729	43799095	chr15:43796729-43799095	0	-	43796729	43796729	8553170	3	627,94,137,	0,1190,2229,
#Deleted in new
chr15	43800310	43801590	chr15:43800310-43801590	0	+	43800310	43800310	8553170	2	474,459,	0,821,
#Deleted in new
chr15	43800422	43802291	chr15:43800422-43802291	1	+	43800598	43801806	0	4	362,56,52,581,	0,709,1095,1288,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	43800598	43803043	chr15:43800598-43803043	1	+	43800598	43801580	789624	2	186,1526,	0,919,
#Deleted in new
chr15	43800626	43801928	chr15:43800626-43801928	0	+	43800626	43800626	8553170	3	158,52,218,	0,891,1084,
#Partially deleted in new
chr15	43804491	43824802	chr15:43804491-43824802	3	-	43805093	43824569	0	9	785,90,160,161,109,188,130,220,312,	0,884,5263,8495,8757,10009,10453,12737,19999,
#Partially deleted in new
chr15	43804905	43810132	chr15:43804905-43810132	0	-	43804905	43804905	8553170	3	371,90,378,	0,470,4849,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr15	43826962	43868419	chr15:43826962-43868419	3	+	43827032	43866392	789624	13	130,402,90,56,124,102,44,154,159,218,153,54,2292,	0,1002,8098,9198,12642,15452,15665,16938,24124,29983,31708,34370,39165,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr15	43826979	43867018	chr15:43826979-43867018	1	+	43828096	43866392	789624	13	139,402,90,56,124,102,44,154,159,218,153,54,891,	0,985,8081,9181,12625,15435,15648,16921,24107,29966,31691,34353,39148,
#Partially deleted in new
chr15	43826987	43842671	chr15:43826987-43842671	0	+	43828096	43842671	789624	7	105,292,90,56,124,102,44,	0,1087,8073,9173,12617,15427,15640,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	43858506	43867018	chr15:43858506-43867018	0	+	43858506	43858506	8553170	4	74,153,54,891,	0,164,2826,7621,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr15	43870760	43924314	chr15:43870760-43924314	1	-	43873884	43902200	789624	14	3702,107,69,75,92,64,88,124,98,105,303,79,43,110,	0,12942,13966,14920,17414,18048,31414,35067,39121,46964,48217,48698,49006,53444,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr15	43870763	44195231	chr15:43870763-44195231	3	-	43873884	44195054	789624	14	3699,107,69,75,92,64,89,88,124,98,79,43,105,279,	0,12939,13963,14917,17411,18045,21217,31411,35064,39118,48695,49003,53441,324189,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr15	43870766	44195210	chr15:43870766-44195210	1	-	43873147	44195054	789624	15	2456,344,107,69,75,92,64,89,88,124,98,79,43,105,258,	0,3352,12936,13960,14914,17408,18042,21214,31408,35061,39115,48692,49000,53438,324186,
#Partially deleted in new
chr15	43873274	44195193	chr15:43873274-44195193	0	-	43919237	44195054	789624	15	1188,107,69,88,92,64,89,88,124,98,303,79,43,105,241,	0,10428,11452,12393,14900,15534,18706,28900,32553,36607,45703,46184,46492,50930,321678,
#Partially deleted in new
chr15	43873274	43924309	chr15:43873274-43924309	0	-	43873891	43924309	789624	14	665,344,107,69,75,92,64,89,88,124,98,79,43,105,	0,844,10428,11452,12406,14900,15534,18706,28900,32553,36607,46184,46492,50930,
#Partially deleted in new
chr15	43873274	44195040	chr15:43873274-44195040	0	-	43919237	44195040	789624	15	1188,107,69,75,92,64,88,124,98,105,303,79,43,105,88,	0,10428,11452,12406,14900,15534,28900,32553,36607,44450,45703,46184,46492,50930,321678,
#Partially deleted in new
chr15	43873274	44194446	chr15:43873274-44194446	1	-	43873891	43919520	789624	16	665,344,107,69,75,92,49,89,88,124,98,79,43,105,72,220,	0,844,10428,11452,12406,14900,15549,18706,28900,32553,36607,46184,46492,50930,228184,320952,
#Partially deleted in new
chr15	43873532	43919502	chr15:43873532-43919502	0	-	43873697	43919502	789624	7	195,64,89,88,124,98,44,	0,15276,18448,28642,32295,36349,45926,
#Partially deleted in new
chr15	43873534	44195252	chr15:43873534-44195252	0	-	43888861	44195054	789624	14	405,344,107,69,75,92,64,89,124,98,79,43,105,300,	0,584,10168,11192,12146,14640,15274,18446,32293,36347,45924,46232,50670,321418,
#Partially deleted in new
chr15	43873852	43879846	chr15:43873852-43879846	1	-	43873884	43879670	789624	2	610,348,	0,5646,
#Partially deleted in new
chr15	43874359	43885106	chr15:43874359-43885106	0	-	43874359	43874359	8553170	3	103,107,380,	0,9343,10367,
#Deleted in new
chr15	43875848	43876244	chr15:43875848-43876244	7	-	43875848	43875848	16724991	1	396,	0,
#Partially deleted in new
chr15	43901913	43909927	chr15:43901913-43909927	0	-	43901913	43901913	8553170	3	349,124,46,	0,3914,7968,
#Partially deleted in new
chr15	43989060	43990184	chr15:43989060-43990184	7	-	43989060	43989060	16724991	1	1124,	0,
#Deleted in new
chr15	44063510	44064313	chr15:44063510-44064313	7	+	44063510	44063510	16724991	1	803,	0,
#Partially deleted in new
chr15	44288728	44337881	chr15:44288728-44337881	0	+	44322994	44337881	789624	6	176,198,55,103,91,119,	0,430,34236,39956,43259,49034,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	44288730	44415758	chr15:44288730-44415758	3	+	44289029	44413406	789624	10	626,55,103,91,145,81,99,171,168,2423,	0,34234,39954,43257,49032,49506,90959,92075,114156,124605,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	44288730	44348918	chr15:44288730-44348918	0	+	44289029	44337811	789624	6	626,55,103,145,81,376,	0,34234,39954,49032,49506,59812,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	44288732	44415729	chr15:44288732-44415729	1	+	44322994	44413406	8553170	12	172,198,147,55,103,91,145,81,99,171,168,2394,	0,426,30674,34232,39952,43255,49030,49504,90957,92073,114154,124603,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	44288737	44308536	chr15:44288737-44308536	0	+	44288737	44288737	8553170	2	619,1299,	0,18500,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	44288759	44415757	chr15:44288759-44415757	1	+	44289029	44413406	789624	9	597,55,103,91,145,81,99,171,2422,	0,34205,39925,43228,49003,49477,90930,92046,124576,
#Partially deleted in new
chr15	44289104	44332059	chr15:44289104-44332059	0	+	44289104	44289352	789624	3	252,103,72,	0,39580,42883,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	44328699	44346149	chr15:44328699-44346149	0	+	44328699	44328699	8553170	5	88,91,145,81,275,	0,3288,9063,9537,17175,
#Partially deleted in new
chr15	44337763	44413543	chr15:44337763-44413543	0	+	44337763	44413406	789624	4	144,99,171,208,	0,41926,43042,75572,
#Deleted in new
chr15	44354690	44355692	chr15:44354690-44355692	7	+	44354690	44354690	16724991	1	1002,	0,
#Partially deleted in new
chr15	44380863	44382229	chr15:44380863-44382229	0	+	44380863	44380863	8553170	2	113,151,	0,1215,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	44387319	44390451	chr15:44387319-44390451	3	-	44387319	44387319	8553170	2	169,486,	0,2646,
#Partially deleted in new
chr15	44402684	44427144	chr15:44402684-44427144	3	-	44402684	44402684	8553170	5	255,76,106,152,36,	0,2642,10649,11525,24424,
#Partially deleted in new
chr15	44403050	44414761	chr15:44403050-44414761	0	+	44403050	44413406	789624	3	4,101,248,	0,10285,11463,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	44406329	44409847	chr15:44406329-44409847	0	+	44406329	44406329	8553170	2	554,329,	0,3189,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr15	44427233	44529038	chr15:44427233-44529038	3	+	44459014	44524174	789624	13	539,210,139,150,216,79,112,87,63,80,127,96,4930,	0,31757,56990,59317,63550,69146,69793,72493,87364,87531,91935,94077,96875,
#Partially deleted in new
chr15	44427621	44490804	chr15:44427621-44490804	0	+	44459014	44490804	789624	5	71,210,139,150,21,	0,31369,56602,58929,63162,
#Partially deleted in new
chr15	44427792	44524543	chr15:44427792-44524543	1	+	44459014	44524174	789624	13	101,210,139,150,216,79,112,87,63,80,127,96,435,	0,31198,56431,58758,62991,68587,69234,71934,86805,86972,91376,93518,96316,
#Partially deleted in new
chr15	44427807	44486578	chr15:44427807-44486578	0	+	44459014	44486578	789624	4	198,210,139,28,	0,31183,56416,58743,
#Partially deleted in new
chr15	44427813	44484314	chr15:44427813-44484314	0	+	44459014	44484314	789624	3	282,210,91,	0,31177,56410,
#Deleted in new
chr15	44447576	44449344	chr15:44447576-44449344	7	-	44447576	44447576	16724991	1	1768,	0,
#Partially deleted in new
chr15	44459002	44527232	chr15:44459002-44527232	1	+	44459014	44524174	789624	11	198,139,150,79,112,87,63,80,127,96,3124,	0,25221,27548,37377,38024,40724,55595,55762,60166,62308,65106,
#Partially deleted in new
chr15	44490991	44503879	chr15:44490991-44503879	0	+	44490991	44490991	8553170	5	8,79,112,87,456,	0,5388,6035,8735,12432,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	44497026	44521406	chr15:44497026-44521406	0	+	44497026	44502021	789624	8	112,87,87,63,80,211,127,96,	0,2700,4935,17571,17738,21627,22142,24284,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	44516649	44517483	chr15:44516649-44517483	3	-	44516649	44516649	8553170	2	265,233,	0,601,
#Partially deleted in new
chr15	44519223	44524436	chr15:44519223-44524436	0	+	44519223	44519223	8553170	3	72,143,328,	0,2040,4885,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	44519636	44525947	chr15:44519636-44525947	0	+	44519636	44519636	8553170	2	1770,1839,	0,4472,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	44527256	44536640	chr15:44527256-44536640	3	-	44527256	44527256	8553170	3	283,212,598,	0,8006,8786,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	44533492	44536923	chr15:44533492-44536923	1	-	44533492	44533492	789624	2	1982,881,	0,2550,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	44535068	44536894	chr15:44535068-44536894	0	-	44535068	44535068	8553170	2	406,94,	0,1732,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	44535088	44535943	chr15:44535088-44535943	0	-	44535088	44535088	8553170	2	386,184,	0,671,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	44535251	44536900	chr15:44535251-44536900	1	-	44535251	44535251	789624	3	223,316,100,	0,791,1549,
#Partially deleted in new
chr15	44537056	44562803	chr15:44537056-44562803	3	+	44537194	44561149	0	8	181,104,55,92,115,162,74,1786,	0,267,13819,14374,17496,20432,23192,23961,
#Partially deleted in new
chr15	44537124	44561999	chr15:44537124-44561999	1	+	44537194	44561149	0	6	113,104,115,162,74,982,	0,199,17428,20364,23124,23893,
#Partially deleted in new
chr15	44537182	44561447	chr15:44537182-44561447	1	+	44537194	44561149	0	7	55,104,55,92,115,74,430,	0,141,13693,14248,17370,23066,23835,
#Partially deleted in new
chr15	44550682	44554574	chr15:44550682-44554574	0	+	44550682	44550682	8553170	3	248,92,22,	0,748,3870,
#Partially deleted in new
chr15	44551437	44557751	chr15:44551437-44557751	0	+	44551437	44551437	8553170	3	85,115,263,	0,3115,6051,
#Partially deleted in new
chr15	44554623	44560575	chr15:44554623-44560575	0	+	44554623	44560361	789624	3	44,162,327,	0,2865,5625,
#Partially deleted in new
chr15	44557504	44563029	chr15:44557504-44563029	0	+	44557504	44561149	789624	4	146,74,725,79,	0,2744,3513,5446,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	44557828	44559188	chr15:44557828-44559188	3	+	44557828	44557828	8553170	2	182,471,	0,889,
#Partially deleted in new
chr15	44562695	44663664	chr15:44562695-44663664	3	-	44563120	44663647	789624	40	606,152,156,89,169,108,134,138,199,140,745,215,163,108,201,273,160,109,206,166,67,162,146,107,204,214,176,128,72,177,176,156,133,146,449,138,202,225,185,274,	0,1851,3158,3521,4728,6702,7829,9987,10851,12206,21118,22940,26556,29635,32563,33387,34088,35569,35935,37771,43329,45748,48144,50734,52667,57494,59063,59524,60032,63635,65973,66537,70809,86170,88795,89433,94399,96383,97736,100695,
#Partially deleted in new
chr15	44562696	44584527	chr15:44562696-44584527	0	-	44563120	44584527	789624	8	605,152,156,89,169,108,134,714,	0,1850,3157,3520,4727,6701,7828,21117,
#Partially deleted in new
chr15	44562853	44663675	chr15:44562853-44663675	1	-	44563120	44663647	789624	38	448,152,156,89,169,108,134,138,745,215,163,108,201,273,160,109,206,166,67,162,146,107,204,214,176,128,72,177,176,156,133,146,449,138,202,225,185,285,	0,1693,3000,3363,4570,6544,7671,9829,20960,22782,26398,29477,32405,33229,33930,35411,35777,37613,43171,45590,47986,50576,52509,57336,58905,59366,59874,63477,65815,66379,70651,86012,88637,89275,94241,96225,97578,100537,
#Partially deleted in new
chr15	44563120	44663647	chr15:44563120-44663647	1	-	44563257	44663647	789624	37	181,169,108,134,138,199,140,745,215,163,108,201,273,160,109,206,166,67,162,146,107,204,214,176,128,72,177,176,156,133,146,449,138,202,225,185,257,	0,4303,6277,7404,9562,10426,11781,20693,22515,26131,29210,32138,32962,33663,35144,35510,37346,42904,45323,47719,50309,52242,57069,58638,59099,59607,63210,65548,66112,70384,85745,88370,89008,93974,95958,97311,100270,
#Partially deleted in new
chr15	44564552	44566144	chr15:44564552-44566144	0	-	44564552	44564552	8553170	2	146,291,	0,1301,
#Partially deleted in new
chr15	44564638	44572824	chr15:44564638-44572824	0	-	44564638	44572824	789624	6	60,156,89,169,134,142,	0,1215,1578,2785,5886,8044,
#Partially deleted in new
chr15	44565965	44572640	chr15:44565965-44572640	0	-	44565965	44565965	8553170	6	44,89,169,108,134,172,	0,251,1458,3432,4559,6503,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	44567337	44573683	chr15:44567337-44573683	0	-	44567337	44567337	8553170	3	255,138,137,	0,5345,6209,
#Partially deleted in new
chr15	44570552	44573820	chr15:44570552-44573820	0	-	44570552	44570552	8553170	3	106,138,274,	0,2130,2994,
#Partially deleted in new
chr15	44573356	44663678	chr15:44573356-44663678	1	-	44573511	44663647	789624	32	389,140,745,215,163,108,201,273,160,109,206,166,67,162,146,107,204,214,176,128,72,177,176,156,133,146,449,138,202,225,185,288,	0,1545,10457,12279,15895,18974,21902,22726,23427,24908,25274,27110,32668,35087,37483,40073,42006,46833,48402,48863,49371,52974,55312,55876,60148,75509,78134,78772,83738,85722,87075,90034,
#Partially deleted in new
chr15	44573357	44575272	chr15:44573357-44575272	0	-	44573357	44573357	8553170	2	388,371,	0,1544,
#Partially deleted in new
chr15	44573733	44584451	chr15:44573733-44584451	0	-	44583828	44584451	789624	4	12,140,122,287,	0,1168,10080,10431,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	44584258	44590528	chr15:44584258-44590528	0	-	44584258	44584258	8553170	5	300,215,72,163,108,	0,1377,4308,4993,6162,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	44585651	44590937	chr15:44585651-44590937	0	-	44585651	44585651	8553170	3	199,163,517,	0,3600,4769,
#Partially deleted in new
chr15	44585837	44596346	chr15:44585837-44596346	0	-	44592416	44596346	789624	4	13,163,108,287,	0,3414,6493,10222,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	44596115	44597172	chr15:44596115-44597172	0	-	44596115	44596115	8553170	2	240,389,	0,668,
#Partially deleted in new
chr15	44596803	44598679	chr15:44596803-44598679	0	-	44596803	44596803	8553170	2	140,415,	0,1461,
#Partially deleted in new
chr15	44598353	44606158	chr15:44598353-44606158	0	-	44598353	44598353	8553170	4	20,206,166,134,	0,277,2113,7671,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	44600259	44610857	chr15:44600259-44610857	0	-	44600462	44610857	789624	4	373,67,162,18,	0,5765,8184,10580,
#Partially deleted in new
chr15	44600563	44610859	chr15:44600563-44610859	0	-	44604123	44610859	789624	5	69,93,67,162,20,	0,3541,5461,7880,10276,
#Partially deleted in new
chr15	44613508	44620305	chr15:44613508-44620305	0	-	44620173	44620305	789624	3	28,204,181,	0,1854,6616,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	44615427	44621866	chr15:44615427-44621866	0	-	44615427	44615427	8553170	2	139,1677,	0,4762,
#Partially deleted in new
chr15	44622475	44663658	chr15:44622475-44663658	1	-	44622703	44663647	789624	12	324,177,176,156,133,146,449,138,202,225,185,268,	0,3855,6193,6757,11029,26390,29015,29653,34619,36603,37956,40915,
#Partially deleted in new
chr15	44633469	44651644	chr15:44633469-44651644	0	-	44633469	44651644	789624	3	168,146,154,	0,15396,18021,
#Partially deleted in new
chr15	44665731	44676550	chr15:44665731-44676550	1	-	44665952	44676490	789624	15	240,150,98,141,160,134,54,98,121,142,69,143,81,206,76,	0,660,1374,2610,3248,3548,3778,4045,4235,6283,6656,7503,8418,9754,10743,
#Partially deleted in new
chr15	44665732	44676888	chr15:44665732-44676888	3	-	44665952	44676490	789624	16	239,150,98,141,160,134,54,98,121,142,69,143,81,206,91,23,	0,659,1373,2609,3247,3547,3777,4044,4234,6282,6655,7502,8417,9753,10742,11133,
#Deleted in new
chr15	44665732	44667019	chr15:44665732-44667019	0	-	44665732	44665732	8553170	2	239,628,	0,659,
#Partially deleted in new
chr15	44665734	44668485	chr15:44665734-44668485	0	-	44665788	44668485	789624	3	237,150,144,	0,657,2607,
#Partially deleted in new
chr15	44665734	44676888	chr15:44665734-44676888	1	-	44665952	44672104	789624	15	237,150,98,141,160,134,54,98,121,225,69,143,119,91,23,	0,657,1371,2607,3245,3545,3775,4042,4232,6280,6653,7500,8558,10740,11131,
#Deleted in new
chr15	44665735	44667278	chr15:44665735-44667278	0	-	44665735	44665735	8553170	3	236,150,173,	0,656,1370,
#Partially deleted in new
chr15	44669802	44675619	chr15:44669802-44675619	0	-	44672100	44675619	789624	7	72,121,225,69,143,81,134,	0,164,2212,2585,3432,4347,5683,
#Partially deleted in new
chr15	44672117	44676824	chr15:44672117-44676824	0	-	44672117	44674191	789624	5	122,69,143,81,350,	0,270,1117,2032,4357,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	44674762	44711316	chr15:44674762-44711316	0	-	44674762	44674762	8553170	2	1803,297,	0,36257,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	44697332	44697430	chr15:44697332-44697430	3	-	44697332	44697332	8553170	1	98,	0,
#Partially deleted in new
chr15	44711486	44718159	chr15:44711486-44718159	1	+	44711546	44716342	789624	5	127,36,189,28,553,	0,3936,4026,4842,6120,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	44711486	44718877	chr15:44711486-44718877	3	+	44711546	44716342	0	4	127,279,28,1271,	0,3936,4842,6120,
#Partially deleted in new
chr15	44711486	44717765	chr15:44711486-44717765	0	+	44711486	44711486	8553170	3	127,934,159,	0,3936,6120,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	44711508	44718851	chr15:44711508-44718851	0	+	44711546	44716342	0	5	105,279,28,98,94,	0,3914,4820,6098,7249,
#Partially deleted in new
chr15	44711512	44717029	chr15:44711512-44717029	1	+	44711546	44716342	0	3	101,279,701,	0,3910,4816,
#Partially deleted in new
chr15	44711516	44718067	chr15:44711516-44718067	0	+	44711546	44715662	789624	4	87,156,28,461,	0,4029,4812,6090,
#Partially deleted in new
chr15	44711516	44718145	chr15:44711516-44718145	1	+	44711546	44716342	789624	4	97,279,28,539,	0,3906,4812,6090,
#Partially deleted in new
chr15	44711518	44717622	chr15:44711518-44717622	0	+	44711546	44715522	789624	4	95,268,28,16,	0,3915,4810,6088,
#Partially deleted in new
chr15	44711926	44717704	chr15:44711926-44717704	0	+	44711926	44711926	8553170	4	94,279,28,98,	0,3496,4402,5680,
#Partially deleted in new
chr15	44711958	44716559	chr15:44711958-44716559	0	+	44711958	44711958	8553170	3	62,279,231,	0,3464,4370,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	44712776	44715179	chr15:44712776-44715179	0	+	44712776	44712776	8553170	1	2403,	0,
#Partially deleted in new
chr15	44715499	44718145	chr15:44715499-44718145	0	+	44715499	44716342	789624	4	202,28,185,302,	0,829,2107,2344,
#Deleted in new
chr15	44715725	44716939	chr15:44715725-44716939	0	+	44715725	44715725	8553170	2	152,320,	0,894,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	44715816	44718145	chr15:44715816-44718145	0	+	44715816	44715816	8553170	1	2329,	0,
#Partially deleted in new
chr15	44728987	44767827	chr15:44728987-44767827	3	+	44736704	44767772	0	8	565,369,477,96,234,23,125,597,	0,7354,25912,27380,29633,30652,30760,38243,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	44729000	44734000	chr15:44729000-44734000	0	+	44729000	44729000	789624	2	552,2638,	0,2362,
#Partially deleted in new
chr15	44729054	44736613	chr15:44729054-44736613	0	+	44729054	44729054	8553170	3	498,104,53,	0,7287,7506,
#Partially deleted in new
chr15	44729072	44736562	chr15:44729072-44736562	0	+	44729072	44729072	8553170	2	480,80,	0,7410,
#Partially deleted in new
chr15	44729141	44731715	chr15:44729141-44731715	0	+	44729141	44729141	8553170	2	208,353,	0,2221,
#Partially deleted in new
chr15	44736361	44767827	chr15:44736361-44767827	1	+	44736704	44767772	0	7	349,477,96,234,23,125,597,	0,18538,20006,22259,23278,23386,30869,
#Partially deleted in new
chr15	44736529	44767825	chr15:44736529-44767825	1	+	44758653	44767772	0	6	181,96,191,23,125,595,	0,19838,22083,23110,23218,30701,
#Partially deleted in new
chr15	44736529	44767825	chr15:44736529-44767825	1	+	44758653	44767772	0	6	181,96,242,23,125,595,	0,19838,22083,23110,23218,30701,
#Partially deleted in new
chr15	44736534	44767827	chr15:44736534-44767827	1	+	44736704	44767772	789624	5	176,96,23,125,597,	0,19833,23105,23213,30696,
#Partially deleted in new
chr15	44736565	44767829	chr15:44736565-44767829	1	+	44736704	44767772	0	6	145,96,234,23,125,599,	0,19802,22055,23074,23182,30665,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	44752917	44767827	chr15:44752917-44767827	0	+	44752917	44752917	8553170	5	2459,2487,23,125,597,	0,3450,6722,6830,14313,
#Partially deleted in new
chr15	44758773	44767443	chr15:44758773-44767443	0	+	44758773	44767443	789624	4	30,23,125,213,	0,866,974,8457,
#Deleted in new
chr15	44778195	44778721	chr15:44778195-44778721	3	-	44778195	44778195	8553170	1	526,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	44825746	44884694	chr15:44825746-44884694	7	-	44825746	44825746	16724991	10	1475,122,175,66,119,160,165,34,111,71,	0,2703,5782,6580,9435,13624,21651,24607,55748,58877,
#Partially deleted in new
chr15	44826370	44828731	chr15:44826370-44828731	4	-	44826370	44826370	16724991	2	851,282,	0,2079,
#Deleted in new
chr15	44826539	44827094	chr15:44826539-44827094	3	+	44826539	44826539	8553170	2	228,196,	0,359,
#Partially deleted in new
chr15	44826950	44830437	chr15:44826950-44830437	4	-	44826950	44826950	16724991	3	271,122,201,	0,1499,3286,
#Partially deleted in new
chr15	44827059	44861850	chr15:44827059-44861850	5	-	44827059	44827059	16724991	9	162,122,175,66,119,160,165,34,66,	0,1390,4469,5267,8122,12311,20338,23294,34725,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	44914801	44930622	chr15:44914801-44930622	7	-	44914801	44914801	16724991	5	133,94,79,61,142,	0,4072,9859,13842,15679,
#Partially deleted in new
chr15	44919375	44920820	chr15:44919375-44920820	7	+	44919375	44919375	16724991	2	278,863,	0,582,
#Partially deleted in new
chr15	44927599	44927703	chr15:44927599-44927703	3	-	44927599	44927599	8553170	1	104,	0,
#Partially deleted in new
chr15	44956701	44979229	chr15:44956701-44979229	3	+	44956718	44978628	789624	7	81,82,140,62,86,89,741,	0,194,1671,4821,9456,17165,21787,
#Partially deleted in new
chr15	44956709	44978639	chr15:44956709-44978639	0	+	44956718	44956865	789624	6	268,140,62,86,89,151,	0,1663,4813,9448,17157,21779,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	44956734	44978612	chr15:44956734-44978612	0	+	44956734	44956865	789624	6	243,140,86,89,93,124,	0,1638,9423,17132,19346,21754,
#Partially deleted in new
chr15	44962829	44962933	chr15:44962829-44962933	3	+	44962829	44962829	8553170	1	104,	0,
#Deleted in new
chr15	44970034	44971178	chr15:44970034-44971178	7	-	44970034	44970034	16724991	1	1144,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	44973557	44973661	chr15:44973557-44973661	3	+	44973557	44973557	8553170	1	104,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	45023103	45077185	chr15:45023103-45077185	3	+	45023283	45073530	0	9	246,34,165,160,119,66,176,122,3821,	0,17304,20153,37963,42167,45077,45773,49213,50261,
#Partially deleted in new
chr15	45023180	45070682	chr15:45023180-45070682	0	+	45023283	45065308	0	7	169,34,165,119,66,176,824,	0,17227,20076,42090,45000,45696,46678,
#Partially deleted in new
chr15	45023194	45073784	chr15:45023194-45073784	0	+	45023283	45061070	789624	9	155,34,165,245,119,66,176,122,420,	0,17213,20062,37787,42076,44986,45682,49122,50170,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	45036235	45073808	chr15:45036235-45073808	1	+	45036341	45073530	789624	9	109,34,165,160,119,66,176,122,444,	0,4172,7021,24831,29035,31945,32641,36081,37129,
#Deleted in new
chr15	45070300	45073373	chr15:45070300-45073373	0	+	45070300	45070300	8553170	3	453,122,9,	0,2016,3064,
#Deleted in new
chr15	45070453	45073905	chr15:45070453-45073905	0	+	45070453	45070453	8553170	3	201,122,541,	0,1863,2911,
#Deleted in new
chr15	45072155	45073434	chr15:45072155-45073434	0	+	45072155	45072155	8553170	2	283,70,	0,1209,
#Deleted in new
chr15	45073491	45074048	chr15:45073491-45074048	3	-	45073491	45073491	8553170	2	198,228,	0,329,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr15	45092649	45114344	chr15:45092649-45114344	1	-	45094149	45113411	789624	34	1623,129,156,159,233,154,128,50,100,231,179,84,70,197,94,226,186,203,114,138,119,176,164,103,91,97,61,167,202,188,165,90,84,372,	0,1913,2286,2787,3178,4588,4964,5359,6733,7012,7400,8105,8555,9143,11310,11490,12993,13475,13878,14182,14695,15397,16139,16874,17240,17778,18000,18461,18734,19118,19904,20337,20692,21323,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr15	45092654	45114161	chr15:45092654-45114161	3	-	45094149	45113411	789624	34	1618,129,156,159,233,154,128,50,100,231,179,84,70,197,94,226,186,203,114,138,119,176,164,103,91,97,61,167,202,188,165,86,88,189,	0,1908,2281,2782,3173,4583,4959,5354,6728,7007,7395,8100,8550,9138,11305,11485,12988,13470,13873,14177,14690,15392,16134,16869,17235,17773,17995,18456,18729,19113,19899,20332,20683,21318,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr15	45099028	45113454	chr15:45099028-45113454	0	-	45099028	45099028	8553170	17	454,567,1235,94,226,186,203,114,138,119,1934,97,61,845,165,86,117,	0,633,1726,4931,5111,6614,7096,7499,7803,8316,9018,11399,11621,12082,13525,13958,14309,
#Deleted in new
chr15	45099816	45100413	chr15:45099816-45100413	0	-	45099816	45099816	8553170	2	76,364,	0,233,
#Deleted in new
chr15	45100842	45101857	chr15:45100842-45101857	0	-	45100842	45100842	8553170	2	432,65,	0,950,
#Partially deleted in new
chr15	45114320	45118421	chr15:45114320-45118421	3	+	45114605	45117909	789624	6	432,58,135,214,215,706,	0,1478,1803,2195,2770,3395,
#Partially deleted in new
chr15	45114325	45117738	chr15:45114325-45117738	0	+	45114325	45114325	8553170	5	427,58,135,790,23,	0,1473,1798,2190,3390,
#Partially deleted in new
chr15	45114473	45118105	chr15:45114473-45118105	0	+	45114605	45115584	789624	6	279,491,135,214,215,390,	0,892,1650,2042,2617,3242,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	45117366	45129861	chr15:45117366-45129861	1	-	45117514	45123014	789624	10	443,166,219,218,214,58,176,117,156,100,	0,537,1780,2736,3225,4818,5501,11651,12093,12395,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	45117370	45129859	chr15:45117370-45129859	3	-	45117514	45123014	789624	11	439,166,219,218,214,135,58,176,117,156,98,	0,533,1776,2732,3221,3716,4814,5497,11647,12089,12391,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	45117373	45129877	chr15:45117373-45129877	1	-	45119105	45123014	789624	6	1992,218,214,58,176,26,	0,2729,3218,4811,5494,12478,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	45117373	45129861	chr15:45117373-45129861	1	-	45117514	45123014	789624	11	436,166,219,218,214,135,58,176,117,187,39,	0,530,1773,2729,3218,3713,4811,5494,11644,12086,12449,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	45117514	45123014	chr15:45117514-45123014	1	-	45117514	45123014	789624	7	295,166,219,218,214,58,147,	0,389,1632,2588,3077,4670,5353,
#Partially deleted in new
chr15	45118555	45122953	chr15:45118555-45122953	0	-	45120360	45122953	789624	6	810,265,214,135,58,86,	0,1547,2036,2531,3629,4312,
#Partially deleted in new
chr15	45118720	45129877	chr15:45118720-45129877	1	-	45119105	45123014	789624	9	645,218,214,58,176,68,117,156,26,	0,1382,1871,3464,4147,10116,10297,10739,11131,
#Partially deleted in new
chr15	45119099	45123020	chr15:45119099-45123020	1	-	45119105	45123014	789624	6	266,218,214,135,58,153,	0,1003,1492,1987,3085,3768,
#Partially deleted in new
chr15	45120778	45129879	chr15:45120778-45129879	0	-	45120778	45123014	789624	6	27,58,176,117,156,28,	0,1406,2089,8239,8681,9073,
#Partially deleted in new
chr15	45120781	45129870	chr15:45120781-45129870	0	-	45120781	45123014	789624	5	24,135,58,176,48,	0,305,1403,2086,9041,
#Partially deleted in new
chr15	45120795	45129877	chr15:45120795-45129877	0	-	45120795	45123014	789624	6	10,58,176,117,156,55,	0,1389,2072,8222,8664,9027,
#Partially deleted in new
chr15	45121208	45129909	chr15:45121208-45129909	0	-	45121208	45123014	789624	6	13,58,176,117,156,58,	0,976,1659,7809,8251,8643,
#Partially deleted in new
chr15	45122967	45129938	chr15:45122967-45129938	0	-	45122967	45123014	789624	4	76,322,156,87,	0,6050,6492,6884,
#Partially deleted in new
chr15	45122976	45129861	chr15:45122976-45129861	0	-	45122976	45123014	789624	5	67,117,92,156,100,	0,6041,6255,6483,6785,
#Deleted in new
chr15	45129154	45129880	chr15:45129154-45129880	0	-	45129154	45129154	8553170	2	461,58,	0,668,
#Deleted in new
chr15	45129172	45129877	chr15:45129172-45129877	0	-	45129172	45129172	8553170	2	443,26,	0,679,
#Partially deleted in new
chr15	45129932	45165576	chr15:45129932-45165576	3	+	45131966	45164901	789624	35	166,192,107,84,165,188,202,167,61,97,91,103,173,176,119,138,114,200,186,226,94,176,70,126,179,231,100,50,128,154,233,159,156,129,798,	0,1538,1985,3931,4212,5171,5541,5849,6417,6596,7991,9133,9494,10962,11359,12042,13257,14103,14962,17500,17971,18339,20699,21190,21941,22353,23447,24018,25869,30904,31805,32286,33599,33857,34846,
#Partially deleted in new
chr15	45129993	45165574	chr15:45129993-45165574	1	+	45131966	45164901	789624	34	105,107,84,165,188,202,167,61,97,91,103,173,176,119,138,114,200,186,226,94,176,70,126,179,231,100,50,128,154,233,159,156,129,796,	0,1924,3870,4151,5110,5480,5788,6356,6535,7930,9072,9433,10901,11298,11981,13196,14042,14901,17439,17910,18278,20638,21129,21880,22292,23386,23957,25808,30843,31744,32225,33538,33796,34785,
#Deleted in new
chr15	45130017	45133934	chr15:45130017-45133934	0	+	45131966	45133934	789624	4	81,177,107,71,	0,1453,1900,3846,
#Partially deleted in new
chr15	45130037	45164966	chr15:45130037-45164966	0	+	45131966	45141013	789624	33	61,107,84,165,188,202,167,61,97,91,103,176,119,185,114,200,186,226,94,176,70,126,179,231,100,50,128,154,233,159,156,129,188,	0,1880,3826,4107,5066,5436,5744,6312,6491,7886,9028,10857,11254,11890,13152,13998,14857,17395,17866,18234,20594,21085,21836,22248,23342,23913,25764,30799,31700,32181,33494,33752,34741,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	45138645	45141039	chr15:45138645-45141039	0	+	45138645	45138645	8553170	2	1370,587,	0,1807,
#Partially deleted in new
chr15	45138817	45165573	chr15:45138817-45165573	1	+	45139090	45164901	789624	24	427,173,176,119,138,114,200,186,226,94,176,70,126,179,231,100,50,128,154,233,159,156,129,795,	0,609,2077,2474,3157,4372,5218,6077,8615,9086,9454,11814,12305,13056,13468,14562,15133,16984,22019,22920,23401,24714,24972,25961,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	45147545	45148558	chr15:45147545-45148558	0	+	45147545	45147545	8553170	3	113,94,287,	0,358,726,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	45147954	45153239	chr15:45147954-45153239	0	+	45147954	45147954	8553170	6	43,176,70,126,179,954,	0,317,2677,3168,3919,4331,
#Deleted in new
chr15	45150299	45151881	chr15:45150299-45151881	0	+	45150299	45150299	8553170	3	402,126,8,	0,823,1574,
#Partially deleted in new
chr15	45151828	45160990	chr15:45151828-45160990	0	+	45151828	45151828	8553170	6	224,231,100,50,128,154,	0,457,1551,2122,3973,9008,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	45152663	45167526	chr15:45152663-45167526	3	-	45152663	45152663	8553170	2	554,41,	0,14822,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	45153787	45155851	chr15:45153787-45155851	0	+	45153787	45153787	8553170	2	213,50,	0,2014,
#Partially deleted in new
chr15	45167213	45201175	chr15:45167213-45201175	3	-	45167946	45199074	789624	8	920,120,172,141,207,142,349,449,	0,4669,4933,6362,8005,10951,31558,33513,
#Partially deleted in new
chr15	45167213	45187956	chr15:45167213-45187956	1	-	45171915	45187951	789624	6	920,120,170,207,142,503,	0,4669,4935,8005,10951,20240,
#Partially deleted in new
chr15	45167250	45187952	chr15:45167250-45187952	1	-	45168107	45187951	789624	4	883,207,142,499,	0,7968,10914,20203,
#Partially deleted in new
chr15	45167712	45181207	chr15:45167712-45181207	1	-	45167946	45178198	789624	6	421,120,172,207,142,101,	0,4170,4434,7506,10452,13394,
#Partially deleted in new
chr15	45167833	45175326	chr15:45167833-45175326	0	-	45167946	45175326	789624	3	300,196,108,	0,4049,7385,
#Partially deleted in new
chr15	45170207	45173658	chr15:45170207-45173658	0	-	45170326	45173658	789624	4	275,73,172,83,	0,1722,1939,3368,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	45170665	45187955	chr15:45170665-45187955	1	-	45171915	45187951	789624	6	1337,170,141,207,142,502,	0,1483,2910,4553,7499,16788,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	45171593	45178260	chr15:45171593-45178260	0	-	45171878	45178260	789624	4	409,172,207,96,	0,553,3625,6571,
#Deleted in new
chr15	45171845	45175269	chr15:45171845-45175269	0	-	45172002	45175269	789624	4	233,172,141,51,	0,301,1730,3373,
#Partially deleted in new
chr15	45174222	45187459	chr15:45174222-45187459	0	-	45174222	45174222	8553170	4	222,207,142,6,	0,996,3942,13231,
#Partially deleted in new
chr15	45175379	45201116	chr15:45175379-45201116	0	-	45175379	45178198	789624	3	46,142,390,	0,2785,25347,
#Deleted in new
chr15	45198516	45199139	chr15:45198516-45199139	3	-	45198516	45198516	8553170	1	623,	0,
#Deleted in new
chr15	45200324	45200632	chr15:45200324-45200632	3	-	45200324	45200324	8553170	1	308,	0,
#Deleted in new
chr15	45214447	45215044	chr15:45214447-45215044	3	-	45214447	45214447	8553170	1	597,	0,
#Deleted in new
chr15	45214905	45215033	chr15:45214905-45215033	3	-	45214905	45214905	8553170	1	128,	0,
#Deleted in new
chr15	45215546	45215943	chr15:45215546-45215943	7	+	45215546	45215546	16724991	1	397,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	45251579	45256002	chr15:45251579-45256002	1	-	45251579	45251579	8553170	4	493,154,38,51,	0,2201,3750,4372,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr15	45252229	45277845	chr15:45252229-45277845	3	+	45253215	45275513	789624	18	49,97,89,92,184,142,114,78,81,81,126,131,169,198,82,99,112,2450,	0,970,1202,9785,10831,11651,12425,12859,13353,13851,15225,15436,15980,17108,17965,20065,20443,23166,
#Partially deleted in new
chr15	45252233	45264683	chr15:45252233-45264683	0	+	45252233	45264683	789624	6	45,89,92,184,142,29,	0,1198,9781,10827,11647,12421,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	45253505	45279227	chr15:45253505-45279227	0	-	45253505	45253505	8553170	4	429,38,47,31,	0,1824,2446,25691,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	45255123	45279251	chr15:45255123-45279251	3	-	45255123	45255123	8553170	4	244,47,183,55,	0,828,9503,24073,
#Deleted in new
chr15	45263060	45267752	chr15:45263060-45267752	0	+	45263060	45264685	789624	7	184,114,78,81,99,126,87,	0,1594,2028,2522,3002,4394,4605,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	45271773	45275951	chr15:45271773-45275951	0	+	45271773	45271773	8553170	2	1011,556,	0,3622,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	45279422	45280474	chr15:45279422-45280474	3	+	45279422	45279422	8553170	2	819,150,	0,902,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	45321076	45321692	chr15:45321076-45321692	7	-	45321076	45321076	16724991	1	616,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	45330208	45332634	chr15:45330208-45332634	7	-	45330208	45330208	16724991	1	2426,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	45354778	45354885	chr15:45354778-45354885	3	-	45354778	45354778	8553170	1	107,	0,
#Partially deleted in new
chr15	45361123	45378793	chr15:45361123-45378793	3	-	45362108	45378453	0	9	1098,117,64,165,138,191,196,219,409,	0,2776,3673,4922,5247,6946,8202,15477,17261,
#Partially deleted in new
chr15	45361125	45378544	chr15:45361125-45378544	0	-	45361125	45361125	8553170	8	1096,117,64,165,138,191,196,1944,	0,2774,3671,4920,5245,6944,8200,15475,
#Partially deleted in new
chr15	45363630	45378547	chr15:45363630-45378547	1	-	45363882	45378453	0	8	386,64,165,138,191,196,219,163,	0,1166,2415,2740,4439,5695,12970,14754,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	45364323	45366070	chr15:45364323-45366070	0	-	45364323	45364323	8553170	2	537,25,	0,1722,
#Partially deleted in new
chr15	45364823	45369707	chr15:45364823-45369707	0	-	45364823	45364823	8553170	5	37,165,138,191,382,	0,1222,1547,3246,4502,
#Partially deleted in new
chr15	45366461	45378519	chr15:45366461-45378519	0	-	45366461	45378453	789624	4	47,191,196,135,	0,1608,2864,11923,
#Partially deleted in new
chr15	45369326	45378075	chr15:45369326-45378075	0	-	45369326	45369422	789624	3	195,219,79,	0,7274,8670,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	45369328	45402218	chr15:45369328-45402218	0	-	45369328	45369422	789624	5	193,219,161,50,280,	0,7272,27593,30217,32610,
#Partially deleted in new
chr15	45369377	45377035	chr15:45369377-45377035	0	-	45369377	45369422	789624	2	144,435,	0,7223,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	45376608	45397259	chr15:45376608-45397259	0	-	45376608	45376608	8553170	2	211,338,	0,20313,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	45378699	45380123	chr15:45378699-45380123	3	+	45378699	45378699	8553170	1	1424,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	45379201	45402327	chr15:45379201-45402327	0	-	45379201	45379201	8553170	5	391,76,161,50,429,	0,1282,17720,20344,22697,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	45380499	45397346	chr15:45380499-45397346	0	-	45380499	45380499	8553170	3	60,87,425,	0,15667,16422,
#Partially deleted in new
chr15	45402330	45421419	chr15:45402330-45421419	3	+	45402429	45421210	789624	8	1188,186,159,210,193,131,126,377,	0,2989,8041,12240,13256,14938,16226,18712,
#Partially deleted in new
chr15	45402369	45415905	chr15:45402369-45415905	0	+	45402369	45402369	8553170	5	1149,186,159,210,319,	0,2950,8002,12201,13217,
#Partially deleted in new
chr15	45402374	45421327	chr15:45402374-45421327	0	+	45402429	45415805	789624	8	1144,186,159,210,223,131,126,285,	0,2945,7997,12196,13212,14894,16182,18668,
#Partially deleted in new
chr15	45402429	45415805	chr15:45402429-45415805	1	+	45402429	45415805	789624	5	1089,186,159,210,219,	0,2890,7942,12141,13157,
#Partially deleted in new
chr15	45405458	45410491	chr15:45405458-45410491	0	+	45405458	45407040	789624	3	47,195,120,	0,1570,4913,
#Partially deleted in new
chr15	45410372	45421378	chr15:45410372-45421378	0	+	45410372	45421210	789624	5	158,193,131,126,336,	0,5214,6896,8184,10670,
#Partially deleted in new
chr15	45416853	45418593	chr15:45416853-45418593	0	+	45416853	45416853	8553170	2	546,37,	0,1703,
#Partially deleted in new
chr15	45417694	45421337	chr15:45417694-45421337	0	+	45417694	45417694	8553170	3	100,126,295,	0,862,3348,
#Partially deleted in new
chr15	45430528	45433342	chr15:45430528-45433342	1	+	45430796	45433016	789624	5	127,63,86,61,395,	0,241,472,1543,2419,
#Partially deleted in new
chr15	45430578	45448761	chr15:45430578-45448761	0	+	45430796	45448761	789624	5	77,63,86,61,213,	0,191,422,1493,17970,
#Partially deleted in new
chr15	45430606	45433449	chr15:45430606-45433449	3	+	45430796	45433016	789624	4	226,86,61,502,	0,394,1465,2341,
#Partially deleted in new
chr15	45430610	45431325	chr15:45430610-45431325	0	+	45430610	45430610	8553170	2	222,325,	0,390,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	45430651	45441808	chr15:45430651-45441808	3	-	45430651	45430651	8553170	3	163,538,28,	0,2961,11129,
#Partially deleted in new
chr15	45433049	45433129	chr15:45433049-45433129	3	+	45433049	45433049	5263520	1	80,	0,
#Partially deleted in new
chr15	45448426	45461390	chr15:45448426-45461390	0	+	45448426	45448426	8553170	2	375,112,	0,12852,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	45450117	45513767	chr15:45450117-45513767	3	+	45450117	45450117	8553170	5	173,231,151,77,70,	0,25961,26284,62255,63580,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	45450249	45479744	chr15:45450249-45479744	1	+	45450249	45450249	8553170	4	41,231,151,1976,	0,25829,26152,27519,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	45459009	45460956	chr15:45459009-45460956	1	+	45459009	45459009	8553170	2	41,511,	0,1436,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	45479610	45522807	chr15:45479610-45522807	3	-	45485162	45522354	789624	8	5707,135,106,202,154,147,505,201,	0,7000,7916,9230,11117,31527,42353,42996,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	45502050	45522236	chr15:45502050-45522236	0	-	45502050	45502050	8553170	3	916,147,273,	0,9087,19913,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	45511150	45556102	chr15:45511150-45556102	4	+	45511150	45511150	16724991	4	55,266,88,630,	0,2547,35929,44322,
#Partially deleted in new
chr15	45511150	45556102	chr15:45511150-45556102	4	+	45511150	45511150	16724991	4	55,266,125,613,	0,2547,24934,44339,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	45511152	45519664	chr15:45511152-45519664	4	+	45511152	45511152	16724991	5	53,77,266,124,402,	0,1220,2545,4616,8110,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	45521835	45586290	chr15:45521835-45586290	7	+	45521835	45521835	16724991	2	275,113,	0,64342,
#Partially deleted in new
chr15	45537249	45537377	chr15:45537249-45537377	3	+	45537249	45537249	5263520	1	128,	0,
#Deleted in new
chr15	45555481	45555971	chr15:45555481-45555971	5	+	45555481	45555481	16724991	1	490,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	45558597	45562877	chr15:45558597-45562877	3	+	45558597	45558597	8553170	2	369,62,	0,4218,
#Deleted in new
chr15	45566775	45567074	chr15:45566775-45567074	7	+	45566775	45566775	16724991	1	299,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	45585756	45586304	chr15:45585756-45586304	3	-	45585756	45585756	8553170	1	548,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	45587122	45609711	chr15:45587122-45609711	3	+	45587443	45606514	789624	5	403,142,88,87,3317,	0,5012,15977,18305,19272,
#Partially deleted in new
chr15	45587213	45607046	chr15:45587213-45607046	0	+	45587213	45587213	8553170	3	312,87,652,	0,18214,19181,
#Partially deleted in new
chr15	45587235	45606981	chr15:45587235-45606981	1	+	45603166	45606514	789624	4	290,88,87,587,	0,15864,18192,19159,
#Partially deleted in new
chr15	45587350	45676314	chr15:45587350-45676314	3	+	45658923	45676314	789624	6	175,251,171,54,195,214,	0,71556,74604,82577,86256,88750,
#Partially deleted in new
chr15	45587351	45606527	chr15:45587351-45606527	1	+	45603166	45606514	789624	5	174,12,88,87,133,	0,10528,15748,18076,19043,
#Partially deleted in new
chr15	45587351	45606529	chr15:45587351-45606529	0	+	45587443	45603153	789624	4	174,84,87,135,	0,15752,18076,19043,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	45587352	45606486	chr15:45587352-45606486	0	+	45597922	45606486	789624	5	173,117,88,87,92,	0,10527,15747,18075,19042,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	45587354	45599562	chr15:45587354-45599562	1	+	45587443	45597913	789624	3	171,142,1683,	0,4780,10525,
#Partially deleted in new
chr15	45587375	45606607	chr15:45587375-45606607	0	+	45587443	45605464	789624	4	150,142,87,213,	0,4759,18052,19019,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	45587378	45605773	chr15:45587378-45605773	0	+	45587378	45587378	8553170	2	147,346,	0,18049,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	45587378	45607773	chr15:45587378-45607773	0	+	45587443	45603122	789624	5	147,142,84,87,1379,	0,4756,15725,18049,19016,
#Partially deleted in new
chr15	45587423	45606671	chr15:45587423-45606671	1	+	45587443	45606514	789624	5	102,19,88,87,277,	0,14933,15676,18004,18971,
#Partially deleted in new
chr15	45587559	45606692	chr15:45587559-45606692	0	+	45587559	45587559	789624	3	237,87,298,	0,17868,18835,
#Partially deleted in new
chr15	45587589	45605470	chr15:45587589-45605470	0	+	45603166	45605470	789624	3	207,88,43,	0,15510,17838,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	45587590	45609710	chr15:45587590-45609710	1	+	45603166	45606514	789624	6	206,142,174,88,87,3316,	0,4544,13643,15509,17837,18804,
#Partially deleted in new
chr15	45587616	45606585	chr15:45587616-45606585	1	+	45587699	45606514	789624	5	180,142,88,87,191,	0,4518,15483,17811,18778,
#Partially deleted in new
chr15	45587745	45606695	chr15:45587745-45606695	0	+	45587745	45587745	8553170	4	51,142,87,301,	0,4389,17682,18649,
#Partially deleted in new
chr15	45587771	45606801	chr15:45587771-45606801	0	+	45587771	45587771	789624	3	105,87,407,	0,17656,18623,
#Partially deleted in new
chr15	45587784	45606601	chr15:45587784-45606601	1	+	45603166	45606514	789624	5	92,142,88,87,207,	0,4350,15315,17643,18610,
#Partially deleted in new
chr15	45587824	45606818	chr15:45587824-45606818	1	+	45603166	45606514	789624	4	52,142,88,424,	0,4310,15275,18570,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	45591983	45592085	chr15:45591983-45592085	3	+	45591983	45591983	8553170	1	102,	0,
#Partially deleted in new
chr15	45592123	45615999	chr15:45592123-45615999	0	+	45592123	45603122	789624	4	153,84,87,312,	0,10980,13304,23564,
#Partially deleted in new
chr15	45631577	45659142	chr15:45631577-45659142	0	+	45658923	45659142	789624	3	202,89,236,	0,349,27329,
#Partially deleted in new
chr15	45631583	45659037	chr15:45631583-45659037	0	+	45658923	45659037	789624	2	436,131,	0,27323,
#Partially deleted in new
chr15	45634720	45669944	chr15:45634720-45669944	0	+	45658923	45669944	789624	4	174,251,171,17,	0,24186,27234,35207,
#Partially deleted in new
chr15	45634739	45691294	chr15:45634739-45691294	1	+	45658923	45691030	789624	10	369,251,171,54,195,210,184,68,179,322,	0,24167,27215,35188,38867,41361,47738,53597,54299,56233,
#Partially deleted in new
chr15	45645880	45669946	chr15:45645880-45669946	0	+	45658923	45669946	789624	4	128,251,171,19,	0,13026,16074,24047,
#Partially deleted in new
chr15	45659080	45674017	chr15:45659080-45674017	0	+	45659080	45673849	789624	4	77,171,54,411,	0,2874,10847,14526,
#Partially deleted in new
chr15	45682539	45689414	chr15:45682539-45689414	0	+	45682539	45689221	789624	3	122,68,376,	0,5797,6499,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	45702639	45703183	chr15:45702639-45703183	3	+	45702639	45702639	8553170	1	544,	0,
#Partially deleted in new
chr15	45705194	45931069	chr15:45705194-45931069	3	+	45705194	45705194	789624	5	95,151,153,134,122,	0,143386,221634,222736,225753,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	46099192	46100392	chr15:46099192-46100392	7	-	46099192	46099192	16724991	2	318,482,	0,718,
#Deleted in new
chr15	46341353	46341599	chr15:46341353-46341599	7	+	46341353	46341353	16724991	1	246,	0,
#Deleted in new
chr15	46351661	46351746	chr15:46351661-46351746	3	-	46351661	46351661	8553170	1	85,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	46365835	46381043	chr15:46365835-46381043	3	+	46365835	46365835	8553170	3	69,89,1767,	0,1921,13441,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	46660657	46660760	chr15:46660657-46660760	3	+	46660657	46660657	8553170	1	103,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	46720192	46720512	chr15:46720192-46720512	3	-	46720192	46720192	8553170	1	320,	0,
#Deleted in new
chr15	46827525	46827958	chr15:46827525-46827958	7	+	46827525	46827525	16724991	1	433,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	47133494	47134122	chr15:47133494-47134122	3	-	47133494	47133494	8553170	1	628,	0,
#Partially deleted in new
chr15	47184100	47774221	chr15:47184100-47774221	1	+	47759798	47771785	789624	20	318,80,72,32,163,112,61,63,102,91,120,89,218,132,156,174,141,78,101,3725,	0,228292,286373,416764,575644,576203,576877,577057,577229,577560,578099,578915,579749,580073,580537,580782,581768,582004,582476,586396,
#Partially deleted in new
chr15	47185662	47759864	chr15:47185662-47759864	0	+	47759798	47759864	789624	6	110,131,80,72,32,120,	0,55577,226730,284811,415202,574082,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	47272596	47272889	chr15:47272596-47272889	3	+	47272596	47272596	8553170	1	293,	0,
#Deleted in new
chr15	47274182	47275164	chr15:47274182-47275164	3	+	47274182	47274182	8553170	2	175,380,	0,602,
#Deleted in new
chr15	47397500	47399554	chr15:47397500-47399554	3	-	47397500	47397500	8553170	2	395,186,	0,1868,
#Partially deleted in new
chr15	47525168	47527756	chr15:47525168-47527756	3	+	47525168	47525168	8553170	2	301,95,	0,2493,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	47603879	47606352	chr15:47603879-47606352	3	-	47603879	47603879	8553170	3	306,71,95,	0,1402,2378,
#Partially deleted in new
chr15	47716997	47761428	chr15:47716997-47761428	0	+	47759798	47761428	789624	6	90,163,112,61,63,99,	0,42747,43306,43980,44160,44332,
#Partially deleted in new
chr15	47717362	47771933	chr15:47717362-47771933	1	+	47759798	47771785	789624	19	330,163,112,61,63,102,91,120,89,218,132,156,174,141,78,62,57,168,1437,	0,42382,42941,43615,43795,43967,44298,44837,45653,46487,46811,47275,47520,48506,48742,49253,49674,51218,53134,
#Partially deleted in new
chr15	47717401	47759983	chr15:47717401-47759983	0	+	47717401	47717401	8553170	2	291,239,	0,42343,
#Partially deleted in new
chr15	47717456	47772882	chr15:47717456-47772882	1	+	47759798	47770547	789624	18	236,163,112,61,63,102,91,120,89,218,132,156,174,141,78,62,35,2386,	0,42288,42847,43521,43701,43873,44204,44743,45559,46393,46717,47181,47426,48412,48648,49159,51124,53040,
#Partially deleted in new
chr15	47718460	47765480	chr15:47718460-47765480	1	+	47759798	47765060	789624	13	413,163,112,61,63,102,91,120,89,218,132,156,598,	0,41284,41843,42517,42697,42869,43200,43739,44555,45389,45713,46177,46422,
#Partially deleted in new
chr15	47718488	47774223	chr15:47718488-47774223	3	+	47759798	47771785	789624	19	385,163,112,61,63,102,91,120,89,218,132,156,174,141,78,62,57,168,3727,	0,41256,41815,42489,42669,42841,43172,43711,44527,45361,45685,46149,46394,47380,47616,48127,48548,50092,52008,
#Partially deleted in new
chr15	47718488	47774223	chr15:47718488-47774223	1	+	47759798	47771785	789624	18	385,163,112,61,63,102,91,120,89,218,132,156,174,141,78,62,57,3727,	0,41256,41815,42489,42669,42841,43172,43711,44527,45361,45685,46149,46394,47380,47616,48127,48548,52008,
#Partially deleted in new
chr15	47718488	47774222	chr15:47718488-47774222	1	+	47759798	47770547	789624	18	385,163,112,61,63,102,91,120,89,218,132,156,174,141,78,62,35,3726,	0,41256,41815,42489,42669,42841,43172,43711,44527,45361,45685,46149,46394,47380,47616,48127,50092,52008,
#Partially deleted in new
chr15	47718488	47774223	chr15:47718488-47774223	1	+	47759798	47771785	789624	17	385,163,112,61,63,102,91,120,89,218,132,156,174,141,78,101,3727,	0,41256,41815,42489,42669,42841,43172,43711,44527,45361,45685,46149,46394,47380,47616,48088,52008,
#Partially deleted in new
chr15	47718488	47774223	chr15:47718488-47774223	1	+	47759798	47771785	789624	17	385,163,112,61,63,102,91,120,89,218,132,156,174,141,78,62,3727,	0,41256,41815,42489,42669,42841,43172,43711,44527,45361,45685,46149,46394,47380,47616,48127,52008,
#Deleted in new
chr15	47730143	47730935	chr15:47730143-47730935	7	-	47730143	47730143	16724991	1	792,	0,
#Deleted in new
chr15	47759722	47762319	chr15:47759722-47762319	0	+	47759798	47762319	789624	7	185,112,61,63,102,91,120,	0,581,1255,1435,1607,1938,2477,
#Deleted in new
chr15	47765821	47767303	chr15:47765821-47767303	0	+	47765821	47765821	8553170	4	188,78,62,267,	0,283,794,1215,
#Deleted in new
chr15	47766576	47767515	chr15:47766576-47767515	0	+	47766576	47767098	789624	2	101,479,	0,460,
#Deleted in new
chr15	47766579	47770765	chr15:47766579-47770765	0	+	47766579	47770765	789624	4	98,57,168,269,	0,457,2001,3917,
#Partially deleted in new
chr15	47803383	47846236	chr15:47803383-47846236	3	-	47803383	47803383	789624	5	52,105,46,128,108,	0,1390,24187,41454,42745,
#Partially deleted in new
chr15	47814001	47846215	chr15:47814001-47846215	0	-	47814001	47814001	8553170	4	175,58,128,87,	0,13557,30836,32127,
#Partially deleted in new
chr15	47819627	47844956	chr15:47819627-47844956	1	-	47819627	47819627	8553170	4	300,40,46,119,	0,490,7943,25210,
#Partially deleted in new
chr15	47884309	48049112	chr15:47884309-48049112	3	+	47884309	47884309	8553170	3	195,63,323,	0,108399,164480,
#Partially deleted in new
chr15	48120971	48142672	chr15:48120971-48142672	3	+	48121044	48142351	789624	9	194,180,84,104,101,281,207,102,644,	0,885,13286,13463,13912,15711,17997,20141,21057,
#Deleted in new
chr15	48121003	48124678	chr15:48121003-48124678	1	+	48121044	48122104	789624	2	162,2822,	0,853,
#Partially deleted in new
chr15	48121023	48142395	chr15:48121023-48142395	1	+	48121044	48142351	789624	8	142,84,104,101,281,207,102,367,	0,13234,13411,13860,15659,17945,20089,21005,
#Partially deleted in new
chr15	48121975	48137202	chr15:48121975-48137202	0	+	48121975	48121975	8553170	5	61,84,104,101,520,	0,12282,12459,12908,14707,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr15	48134630	48178517	chr15:48134630-48178517	3	-	48142907	48178237	789624	17	8441,52,209,72,99,69,51,102,64,50,154,192,94,8,53,209,441,	0,14401,14532,16469,16842,17243,17603,19161,23362,23544,24138,24982,31302,31490,32718,34000,43446,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	48139431	48149986	chr15:48139431-48149986	0	-	48139431	48139431	8553170	3	3640,52,824,	0,9600,9731,
#Partially deleted in new
chr15	48141795	48152274	chr15:48141795-48152274	0	-	48141795	48141795	8553170	5	1276,52,209,99,401,	0,7236,7367,9677,10078,
#Partially deleted in new
chr15	48141796	48178353	chr15:48141796-48178353	1	-	48142907	48178237	789624	16	1275,52,209,99,69,51,102,64,50,154,192,94,8,53,209,277,	0,7235,7366,9676,10077,10437,11995,16196,16378,16972,17816,24136,24324,25552,26834,36280,
#Partially deleted in new
chr15	48141797	48149326	chr15:48141797-48149326	0	-	48142907	48149326	789624	4	339,176,52,164,	0,1098,7234,7365,
#Partially deleted in new
chr15	48141805	48152280	chr15:48141805-48152280	1	-	48142907	48152276	789624	6	1266,52,209,99,69,47,	0,7226,7357,9667,10068,10428,
#Partially deleted in new
chr15	48142651	48178144	chr15:48142651-48178144	1	-	48142907	48178078	789624	16	420,52,209,72,99,69,51,102,64,50,154,192,95,60,209,68,	0,6380,6511,8448,8821,9222,9582,11140,15341,15523,16117,16961,23281,24690,25979,35425,
#Partially deleted in new
chr15	48142665	48149313	chr15:48142665-48149313	0	-	48142665	48142665	8553170	2	406,282,	0,6366,
#Partially deleted in new
chr15	48143060	48159670	chr15:48143060-48159670	0	-	48143060	48159670	789624	10	11,52,209,99,69,102,64,50,154,58,	0,5971,6102,8412,8813,10731,14932,15114,15708,16552,
#Partially deleted in new
chr15	48149196	48154076	chr15:48149196-48154076	0	-	48149196	48149196	8553170	5	175,99,69,51,285,	0,2276,2677,3037,4595,
#Partially deleted in new
chr15	48152116	48158921	chr15:48152116-48158921	0	-	48152116	48152116	8553170	5	168,102,64,50,153,	0,1675,5876,6058,6652,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	48152306	48178316	chr15:48152306-48178316	0	-	48166017	48178237	789624	9	1587,64,50,154,192,94,8,209,240,	0,5686,5868,6462,7306,13626,13814,16324,25770,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	48152307	48178316	chr15:48152307-48178316	1	-	48166017	48178237	789624	8	1586,64,50,154,192,95,210,240,	0,5685,5867,6461,7305,13625,16322,25769,
#Deleted in new
chr15	48157135	48158920	chr15:48157135-48158920	0	-	48157135	48157135	8553170	4	763,64,50,152,	0,857,1039,1633,
#Partially deleted in new
chr15	48159595	48178291	chr15:48159595-48178291	0	-	48159595	48159595	8553170	3	209,209,215,	0,9035,18481,
#Partially deleted in new
chr15	48178121	48203710	chr15:48178121-48203710	3	+	48201300	48201546	789624	3	279,397,2467,	0,13335,23122,
#Partially deleted in new
chr15	48178437	48303786	chr15:48178437-48303786	1	+	48207719	48302885	789624	28	209,114,606,132,76,96,140,111,112,128,85,152,108,124,102,156,100,112,141,107,83,144,132,112,87,136,68,1037,	0,13302,29096,42196,42483,48641,50751,51955,54289,56439,63077,66315,68471,68899,71137,73177,77373,80762,89123,91220,96133,106668,109605,109967,113340,120702,122877,124312,
#Partially deleted in new
chr15	48178466	48203697	chr15:48178466-48203697	1	+	48201300	48201546	789624	2	180,2454,	0,22777,
#Partially deleted in new
chr15	48189036	48191031	chr15:48189036-48191031	0	-	48189036	48189036	8553170	2	473,99,	0,1896,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	48189119	48190960	chr15:48189119-48190960	1	-	48189119	48189119	8553170	3	390,100,28,	0,938,1813,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	48189386	48191691	chr15:48189386-48191691	3	-	48189386	48189386	8553170	4	123,118,129,111,	0,653,1546,2194,
#Partially deleted in new
chr15	48191538	48203756	chr15:48191538-48203756	1	+	48201300	48201546	789624	2	315,2513,	0,9705,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr15	48191647	48303718	chr15:48191647-48303718	1	+	48207719	48302885	789624	28	206,606,138,132,76,96,140,111,112,128,85,152,108,124,102,156,100,112,141,107,83,144,132,112,87,136,68,969,	0,15886,26184,28986,29273,34828,37541,38745,41079,43229,49867,53105,55261,55689,57927,59967,64163,67552,75913,78010,82923,93458,96395,96757,100130,107492,109667,111102,
#Partially deleted in new
chr15	48191663	48230430	chr15:48191663-48230430	0	+	48220929	48230430	789624	6	190,124,76,96,140,38,	0,28970,29257,34812,37525,38729,
#Partially deleted in new
chr15	48191681	48304078	chr15:48191681-48304078	3	+	48207719	48302885	789624	27	172,606,132,76,96,140,111,112,128,85,152,108,124,102,156,100,112,141,107,83,144,132,112,87,136,68,1329,	0,15852,28952,29239,34794,37507,38711,41045,43195,49833,53071,55227,55655,57893,59933,64129,67518,75879,77976,82889,93424,96361,96723,100096,107458,109633,111068,
#Partially deleted in new
chr15	48191764	48285127	chr15:48191764-48285127	0	+	48220929	48285127	789624	20	89,132,76,96,140,111,112,128,85,152,108,124,102,156,100,112,141,107,83,22,	0,28869,29156,34711,37424,38628,40962,43112,49750,52988,55144,55572,57810,59850,64046,67435,75796,77893,82806,93341,
#Partially deleted in new
chr15	48191788	48302997	chr15:48191788-48302997	1	+	48207719	48302885	789624	27	65,606,132,76,96,140,111,112,128,85,152,108,124,102,156,100,112,141,107,83,144,132,112,87,136,68,248,	0,15745,28845,29132,34687,37400,38604,40938,43088,49726,52964,55120,55548,57786,59826,64022,67411,75772,77869,82782,93317,96254,96616,99989,107351,109526,110961,
#Partially deleted in new
chr15	48192045	48203744	chr15:48192045-48203744	1	+	48201300	48201546	789624	2	399,2501,	0,9198,
#Partially deleted in new
chr15	48192190	48201684	chr15:48192190-48201684	3	-	48192190	48192190	8553170	2	250,445,	0,9049,
#Partially deleted in new
chr15	48206300	48304076	chr15:48206300-48304076	1	+	48207719	48302885	789624	27	30,606,132,76,96,140,111,112,128,85,152,108,124,102,156,100,112,141,107,83,144,132,112,87,136,68,1327,	0,1233,14333,14620,20175,22888,24092,26426,28576,35214,38452,40608,41036,43274,45314,49510,52899,61260,63357,68270,78805,81742,82104,85477,92839,95014,96449,
#Partially deleted in new
chr15	48206301	48304078	chr15:48206301-48304078	1	+	48207719	48302885	789624	27	29,606,132,76,96,140,111,112,128,85,152,108,124,102,156,100,112,141,107,83,144,132,112,87,136,68,1329,	0,1232,14332,14619,20777,22887,24091,26425,28575,35213,38451,40607,41035,43273,45313,49509,52898,61259,63356,68269,78804,81741,82103,85476,92838,95013,96448,
#Partially deleted in new
chr15	48207533	48237349	chr15:48207533-48237349	1	+	48207719	48237064	789624	9	606,132,76,96,140,111,112,128,363,	0,13100,13387,18942,21655,22859,25193,27343,29453,
#Partially deleted in new
chr15	48207719	48221445	chr15:48207719-48221445	1	+	48207719	48221364	789624	4	420,132,76,107,	0,12914,13201,13619,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr15	48222327	48304076	chr15:48222327-48304076	0	+	48222327	48222327	8553170	23	4847,140,111,112,128,85,152,108,124,102,156,100,112,141,107,83,144,132,112,87,136,68,1327,	0,6861,8065,10399,12549,19187,22425,24581,25009,27247,29287,33483,36872,45233,47330,52243,62778,65715,66077,69450,76812,78987,80422,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr15	48224325	48304078	chr15:48224325-48304078	0	+	48224325	48224325	8553170	22	5003,111,112,128,85,152,108,124,102,156,100,112,141,107,83,144,132,112,87,136,68,1329,	0,6067,8401,10551,17189,20427,22583,23011,25249,27289,31485,34874,43235,45332,50245,60780,63717,64079,67452,74814,76989,78424,
#Partially deleted in new
chr15	48225850	48234925	chr15:48225850-48234925	0	+	48225850	48225850	8553170	5	97,140,111,112,49,	0,3338,4542,6876,9026,
#Partially deleted in new
chr15	48232724	48235344	chr15:48232724-48235344	0	+	48232724	48232724	8553170	2	114,468,	0,2152,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	48312352	48331856	chr15:48312352-48331856	3	-	48312352	48312352	8553170	3	389,69,294,	0,2542,19210,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	48327565	48331846	chr15:48327565-48331846	1	-	48327565	48327565	8553170	2	3498,744,	0,3537,
#Deleted in new
chr15	48330345	48331792	chr15:48330345-48331792	0	-	48330345	48330345	8553170	2	347,230,	0,1217,
#Partially deleted in new
chr15	48331010	48341495	chr15:48331010-48341495	1	+	48331166	48341484	789624	6	181,139,92,45,75,37,	0,1257,3406,5035,10278,10448,
#Partially deleted in new
chr15	48331094	48342137	chr15:48331094-48342137	1	+	48331166	48342078	789624	7	97,139,92,45,75,71,116,	0,1173,3322,4951,10194,10420,10927,
#Partially deleted in new
chr15	48331404	48342293	chr15:48331404-48342293	1	+	48332320	48342078	789624	7	75,139,92,45,75,71,272,	0,863,3012,4641,9884,10110,10617,
#Partially deleted in new
chr15	48331422	48343373	chr15:48331422-48343373	3	+	48331515	48342078	0	7	373,139,92,45,75,71,1352,	0,845,2994,4623,9866,10092,10599,
#Partially deleted in new
chr15	48331455	48342052	chr15:48331455-48342052	0	+	48331515	48342052	789624	7	271,139,92,45,75,71,31,	0,812,2961,4590,9833,10059,10566,
#Partially deleted in new
chr15	48331472	48342395	chr15:48331472-48342395	0	+	48331515	48341512	789624	7	323,139,92,45,75,123,374,	0,795,2944,4573,9816,9990,10549,
#Partially deleted in new
chr15	48332102	48343369	chr15:48332102-48343369	1	+	48332251	48342078	0	6	304,92,45,75,71,1348,	0,2314,3943,9186,9412,9919,
#Partially deleted in new
chr15	48332209	48342395	chr15:48332209-48342395	1	+	48332251	48341428	789624	4	197,92,45,1107,	0,2207,3836,9079,
#Partially deleted in new
chr15	48332405	48342033	chr15:48332405-48342033	0	+	48332711	48342033	789624	6	332,92,45,75,71,12,	0,2011,3640,8883,9109,9616,
#Partially deleted in new
chr15	48334444	48340236	chr15:48334444-48340236	0	+	48334444	48334444	8553170	3	64,45,92,	0,1601,5700,
#Partially deleted in new
chr15	48341135	48342062	chr15:48341135-48342062	0	+	48341135	48341135	8553170	3	228,71,41,	0,379,886,
#Partially deleted in new
chr15	48408305	48645849	chr15:48408305-48645849	3	-	48410989	48644769	789624	66	3074,175,232,120,129,117,123,126,207,126,132,123,120,117,66,150,126,120,129,117,126,123,126,72,159,123,126,69,165,123,123,126,123,123,126,126,123,126,126,129,126,228,126,51,138,120,126,126,54,153,123,123,126,120,141,180,159,126,126,198,96,96,99,83,345,275,	0,4263,7230,12381,13252,13646,17063,17433,19261,20040,22365,24560,26288,28655,29016,29462,33415,36235,37070,38400,40462,44256,48331,51940,54776,55593,57262,57484,59632,60106,62328,64245,65949,66222,73349,75512,77068,78769,79006,79807,80062,81545,84155,85898,86817,87163,87794,88960,90679,95481,96719,100276,101738,105243,107081,107877,112353,117824,125774,129305,187977,191833,202422,204704,236300,237269,
#Partially deleted in new
chr15	48410073	48467991	chr15:48410073-48467991	0	-	48427578	48467991	789624	30	1306,175,232,120,129,117,123,126,207,62,126,132,123,120,117,66,150,126,120,129,117,126,123,126,72,159,123,126,69,54,	0,2495,5462,10613,11484,11878,15295,15665,17493,17808,18272,20597,22792,24520,26887,27248,27694,31647,34467,35302,36632,38694,42488,46563,50172,53008,53825,55494,55716,57864,
#Partially deleted in new
chr15	48411200	48416716	chr15:48411200-48416716	0	-	48411200	48411200	8553170	4	179,175,232,74,	0,1368,4335,5442,
#Partially deleted in new
chr15	48427943	48432891	chr15:48427943-48432891	0	-	48427943	48427943	8553170	3	528,132,26,	0,2727,4922,
#Partially deleted in new
chr15	48430763	48645709	chr15:48430763-48645709	0	-	48472649	48644769	789624	31	39,123,120,117,66,150,126,120,129,117,126,123,126,72,159,123,126,69,165,123,123,126,123,123,98,96,96,99,83,345,135,	0,2102,3830,6197,6558,7004,10957,13777,14612,15942,18004,21798,25873,29482,32318,33135,34804,35026,37174,37648,39870,41787,43491,43764,106947,165519,169375,179964,182246,213842,214811,
#Partially deleted in new
chr15	48437621	48445412	chr15:48437621-48445412	0	-	48437621	48437621	8553170	4	296,126,120,37,	0,4099,6919,7754,
#Deleted in new
chr15	48528979	48529728	chr15:48528979-48529728	3	-	48528979	48528979	8553170	1	749,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	48640988	48645721	chr15:48640988-48645721	1	-	48644601	48644769	789624	2	3962,147,	0,4586,
#Deleted in new
chr15	48642846	48644832	chr15:48642846-48644832	0	-	48642846	48642846	8553170	2	255,227,	0,1759,
#Partially deleted in new
chr15	48645950	48652016	chr15:48645950-48652016	3	+	48645950	48645950	8553170	2	880,1063,	0,5003,
#Deleted in new
chr15	48662530	48663056	chr15:48662530-48663056	3	-	48662530	48662530	8553170	1	526,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	48712927	48742014	chr15:48712927-48742014	0	-	48717116	48742014	789624	4	283,152,74,68,	0,4090,28703,29019,
#Deleted in new
chr15	48725337	48725827	chr15:48725337-48725827	7	+	48725337	48725337	16724991	1	490,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	48729079	48729844	chr15:48729079-48729844	3	-	48729079	48729079	8553170	2	107,433,	0,332,
#Partially deleted in new
chr15	48737934	48811141	chr15:48737934-48811141	1	-	48738248	48805649	0	27	1354,104,154,104,97,168,121,651,132,282,133,129,110,126,205,164,92,148,201,140,141,151,279,70,104,94,181,	0,3666,4012,6305,6961,10508,14414,17968,22200,24456,29125,29400,30284,31021,34552,43261,44204,46038,50866,53302,55386,58075,59366,59726,60013,67628,73026,
#Partially deleted in new
chr15	48738150	48810987	chr15:48738150-48810987	3	-	48738248	48805649	0	26	1138,104,154,104,97,121,651,132,282,133,129,110,126,205,164,92,148,201,140,141,151,279,70,104,94,27,	0,3450,3796,6089,6745,14198,17752,21984,24240,28909,29184,30068,30805,34336,43045,43988,45822,50650,53086,55170,57859,59150,59510,59797,67412,72810,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr15	48740505	48811030	chr15:48740505-48811030	1	-	48741586	48805649	0	25	1199,154,104,97,168,121,651,132,282,133,129,110,126,205,164,92,148,201,140,141,151,70,104,94,70,	0,1441,3734,4390,7937,11843,15397,19629,21885,26554,26829,27713,28450,31981,40690,41633,43467,48295,50731,52815,55504,57155,57442,65057,70455,
#Partially deleted in new
chr15	48768972	48773531	chr15:48768972-48773531	0	-	48768972	48768972	8553170	3	109,205,277,	0,3514,4282,
#Partially deleted in new
chr15	48772514	48811146	chr15:48772514-48811146	0	-	48772514	48805649	789624	13	177,164,92,148,201,140,141,151,279,70,104,94,186,	0,8681,9624,11458,16286,18722,20806,23495,24786,25146,25433,33048,38446,
#Deleted in new
chr15	48783189	48784121	chr15:48783189-48784121	3	+	48783189	48783189	8553170	2	182,224,	0,708,
#Partially deleted in new
chr15	48783982	48789322	chr15:48783982-48789322	0	-	48783982	48783982	8553170	3	138,201,85,	0,4818,5255,
#Partially deleted in new
chr15	48797670	48811079	chr15:48797670-48811079	0	-	48797670	48797670	8553170	3	381,94,119,	0,7892,13290,
#Partially deleted in new
chr15	48797716	48810594	chr15:48797716-48810594	0	-	48797716	48805649	789624	4	14,104,94,376,	0,231,7846,12502,
#Partially deleted in new
chr15	48805519	48811076	chr15:48805519-48811076	0	-	48805519	48805519	8553170	2	137,116,	0,5441,
#Deleted in new
chr15	48810700	48811588	chr15:48810700-48811588	3	+	48810700	48810700	8553170	2	107,658,	0,230,
#Deleted in new
chr15	48810711	48811909	chr15:48810711-48811909	0	+	48810711	48810711	8553170	1	1198,	0,
#Partially deleted in new
chr15	48823734	48963444	chr15:48823734-48963444	3	-	48825970	48963015	789624	12	2392,254,180,61,172,124,52,54,120,64,71,1014,	0,11034,19674,27453,32218,33957,44083,48354,60513,67013,101144,138696,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	48825166	48877489	chr15:48825166-48877489	1	-	48825970	48876658	789624	9	960,254,180,61,172,124,52,54,942,	0,9602,18242,26021,30786,32525,42651,46922,51381,
#Partially deleted in new
chr15	48825778	48878054	chr15:48825778-48878054	1	-	48825970	48872124	789624	10	348,254,180,61,172,124,52,54,69,133,	0,8990,17630,25409,30174,31913,42039,46310,51789,52143,
#Partially deleted in new
chr15	48834845	48877629	chr15:48834845-48877629	0	-	48843537	48872124	789624	7	177,180,172,124,52,54,62,	0,8563,21107,22846,32972,37243,42722,
#Partially deleted in new
chr15	48855952	48878050	chr15:48855952-48878050	0	-	48855952	48872124	789624	5	172,124,52,54,483,	0,1739,11865,16136,21615,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	48872012	48877281	chr15:48872012-48877281	0	-	48872012	48872012	8553170	2	130,734,	0,4535,
#Deleted in new
chr15	48877885	48880183	chr15:48877885-48880183	3	+	48878176	48878740	789624	1	2298,	0,
#Deleted in new
chr15	48878135	48878785	chr15:48878135-48878785	1	+	48878176	48878740	789624	2	137,447,	0,203,
#Partially deleted in new
chr15	48938235	48948031	chr15:48938235-48948031	3	+	48938235	48938235	8553170	4	137,179,143,207,	0,7716,8949,9589,
#Deleted in new
chr15	48971802	48973361	chr15:48971802-48973361	7	+	48971802	48971802	16724991	1	1559,	0,
#Partially deleted in new
chr15	48988475	48996489	chr15:48988475-48996489	0	-	48988586	48996489	789624	3	146,129,123,	0,4322,7891,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr15	48988637	49046563	chr15:48988637-49046563	1	-	48992243	49046299	789624	18	4289,220,155,221,163,133,170,142,168,81,135,116,25,230,136,325,179,288,	0,7729,11195,12239,20578,23093,24010,27922,28210,28910,30780,38727,39506,39815,44327,46696,48953,57638,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr15	48988769	49046433	chr15:48988769-49046433	3	-	48992243	49046299	789624	17	4157,220,155,221,163,133,170,142,168,81,116,25,230,136,325,179,158,	0,7597,11063,12107,20446,22961,23878,27790,28078,28778,38595,39374,39683,44195,46564,48821,57506,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr15	48996383	49046446	chr15:48996383-49046446	0	-	48996383	49028632	789624	17	203,155,221,163,133,170,142,168,81,135,116,25,230,136,123,179,171,	0,3449,4493,12832,15347,16264,20176,20464,21164,23034,30981,31760,32069,36581,38950,41207,49892,
#Deleted in new
chr15	49011546	49013141	chr15:49011546-49013141	0	-	49011546	49011546	8553170	2	317,494,	0,1101,
#Deleted in new
chr15	49016435	49017053	chr15:49016435-49017053	0	-	49016435	49016435	8553170	2	266,206,	0,412,
#Partially deleted in new
chr15	49016916	49019647	chr15:49016916-49019647	0	-	49016916	49016916	8553170	3	99,81,230,	0,631,2501,
#Partially deleted in new
chr15	49016946	49046447	chr15:49016946-49046447	0	-	49016946	49046299	789624	9	69,81,116,25,35,82,325,179,172,	0,601,10418,11197,11506,16072,18387,20644,29329,
#Deleted in new
chr15	49016951	49017793	chr15:49016951-49017793	0	-	49016951	49016951	8553170	2	64,246,	0,596,
#Partially deleted in new
chr15	49037394	49046446	chr15:49037394-49046446	0	-	49037394	49037394	8553170	2	375,171,	0,8881,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	49042340	49042643	chr15:49042340-49042643	3	-	49042340	49042340	8553170	1	303,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	49101790	49103264	chr15:49101790-49103264	3	+	49101790	49101790	8553170	2	420,323,	0,1151,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr15	49122727	49155652	chr15:49122727-49155652	3	-	49127949	49155578	0	13	5367,59,83,98,53,179,175,78,90,126,78,114,128,	0,5974,6749,7991,11031,11202,11612,14422,14620,16800,21499,22237,32797,
#Partially deleted in new
chr15	49127349	49155661	chr15:49127349-49155661	1	-	49127949	49155578	0	13	745,59,83,98,53,179,175,78,111,126,78,114,137,	0,1352,2127,3369,6409,6580,6990,9800,9998,12178,16877,17615,28175,
#Partially deleted in new
chr15	49127535	49155604	chr15:49127535-49155604	1	-	49127949	49155578	789624	11	559,59,83,98,53,179,175,78,90,126,80,	0,1166,1941,3183,6223,6394,6804,9614,9812,11992,27989,
#Partially deleted in new
chr15	49134032	49155590	chr15:49134032-49155590	0	-	49134032	49155578	789624	8	76,175,78,90,126,78,114,66,	0,307,3117,3315,5495,10194,10932,21492,
#Partially deleted in new
chr15	49134082	49155604	chr15:49134082-49155604	0	-	49134082	49155578	789624	6	26,175,78,90,126,80,	0,257,3067,3265,5445,21442,
#Partially deleted in new
chr15	49134134	49137459	chr15:49134134-49137459	0	-	49134134	49134134	8553170	3	380,78,112,	0,3015,3213,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	49137761	49137863	chr15:49137761-49137863	3	-	49137761	49137761	8553170	1	102,	0,
#Partially deleted in new
chr15	49139257	49155604	chr15:49139257-49155604	0	-	49139257	49139257	8553170	4	396,78,114,80,	0,4969,5707,16267,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	49155655	49282067	chr15:49155655-49282067	0	+	49155996	49201169	789624	7	361,98,89,124,91,147,81,	0,6108,45506,61534,80195,83565,126331,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	49155758	49239330	chr15:49155758-49239330	0	+	49155996	49201169	789624	6	258,122,89,124,91,110,	0,5981,45403,61431,80092,83462,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	49155764	49331882	chr15:49155764-49331882	3	+	49155996	49328159	0	10	252,89,124,91,147,99,153,211,202,3931,	0,45397,61425,80086,83456,126222,127801,136562,163839,172187,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	49155770	49239330	chr15:49155770-49239330	0	+	49201180	49239330	789624	6	246,124,89,124,91,110,	0,3074,45391,61419,80080,83450,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	49155774	49239348	chr15:49155774-49239348	0	+	49155996	49201169	789624	6	242,122,89,141,91,128,	0,5965,45387,61398,80076,83446,
#Deleted in new
chr15	49156328	49156847	chr15:49156328-49156847	7	+	49156328	49156328	16724991	1	519,	0,
#Deleted in new
chr15	49169069	49169153	chr15:49169069-49169153	3	-	49169069	49169069	5263520	1	84,	0,
#Partially deleted in new
chr15	49170015	49328518	chr15:49170015-49328518	1	+	49170322	49328159	0	10	360,89,124,91,147,99,153,211,202,567,	0,31146,47174,65835,69205,111971,113550,122311,149588,157936,
#Partially deleted in new
chr15	49170203	49328514	chr15:49170203-49328514	1	+	49201180	49328159	789624	10	155,89,124,91,147,99,153,211,202,563,	0,30958,46986,65647,69017,111783,113362,122123,149400,157748,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	49170216	49239270	chr15:49170216-49239270	0	+	49201180	49225244	789624	6	142,89,124,145,91,50,	0,30945,46973,54988,65634,69004,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	49170223	49283579	chr15:49170223-49283579	0	+	49170322	49225244	789624	8	152,89,124,145,91,147,99,14,	0,30938,46966,54981,65627,68997,111763,113342,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	49170248	49194210	chr15:49170248-49194210	0	+	49170248	49170248	8553170	2	127,300,	0,23662,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	49170259	49328529	chr15:49170259-49328529	0	+	49201180	49235631	789624	12	99,89,124,115,91,147,99,153,211,145,202,578,	0,30902,46930,65365,65591,68961,111727,113306,122067,148712,149344,157692,
#Partially deleted in new
chr15	49170282	49292422	chr15:49170282-49292422	0	+	49201180	49292422	789624	7	76,89,124,91,147,153,42,	0,30879,46907,65568,68938,113283,122098,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	49170311	49283718	chr15:49170311-49283718	0	+	49201180	49225244	789624	8	47,89,124,145,91,147,99,153,	0,30850,46878,54893,65539,68909,111675,113254,
#Partially deleted in new
chr15	49170477	49328503	chr15:49170477-49328503	1	+	49201180	49328159	789624	10	100,89,124,91,147,99,153,211,202,552,	0,30684,46712,65373,68743,111509,113088,121849,149126,157474,
#Partially deleted in new
chr15	49177609	49178741	chr15:49177609-49178741	7	-	49177609	49177609	16724991	2	235,363,	0,769,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	49198899	49199194	chr15:49198899-49199194	3	-	49198899	49198899	8553170	1	295,	0,
#Partially deleted in new
chr15	49239219	49319707	chr15:49239219-49319707	0	+	49239219	49239219	8553170	6	148,99,153,211,82,104,	0,42767,44346,53107,78891,80384,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	49283705	49367869	chr15:49283705-49367869	0	+	49283705	49367536	789624	4	13,211,202,379,	0,8621,35898,83785,
#Partially deleted in new
chr15	49292470	49367697	chr15:49292470-49367697	0	+	49292470	49367531	789624	4	67,202,179,207,	0,27133,35481,75020,
#Partially deleted in new
chr15	49319681	49328982	chr15:49319681-49328982	0	+	49319681	49328694	789624	3	124,179,317,	0,8270,8984,
#Partially deleted in new
chr15	49328390	49620931	chr15:49328390-49620931	3	-	49328567	49615171	789624	16	285,70,78,161,98,138,127,102,99,105,36,68,232,54,123,232,	0,3389,7028,39057,42911,179820,213289,239854,246620,248350,249238,259625,261385,282824,286730,292309,
#Partially deleted in new
chr15	49328392	49334302	chr15:49328392-49334302	0	-	49328392	49328392	8553170	3	283,70,85,	0,3387,5825,
#Deleted in new
chr15	49343607	49344254	chr15:49343607-49344254	3	+	49343607	49343607	8553170	1	647,	0,
#Deleted in new
chr15	49353484	49354034	chr15:49353484-49354034	3	+	49353484	49353484	8553170	1	550,	0,
#Deleted in new
chr15	49365123	49366685	chr15:49365123-49366685	7	-	49365123	49365123	16724991	1	1562,	0,
#Partially deleted in new
chr15	49422399	49620929	chr15:49422399-49620929	1	-	49422709	49615171	789624	11	315,138,127,99,105,36,68,232,54,123,299,	0,85811,119280,152611,154341,155229,165616,167376,188815,192721,198231,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	49423095	49488775	chr15:49423095-49488775	3	+	49424297	49484504	789624	4	345,552,104,4466,	0,936,60055,61214,
#Partially deleted in new
chr15	49423177	49487326	chr15:49423177-49487326	1	+	49424297	49484504	789624	4	263,552,104,3017,	0,854,59973,61132,
#Deleted in new
chr15	49423236	49425515	chr15:49423236-49425515	1	+	49424297	49424591	789624	2	204,1484,	0,795,
#Partially deleted in new
chr15	49423257	49484559	chr15:49423257-49484559	0	+	49424297	49484504	789624	4	183,552,104,250,	0,774,59893,61052,
#Partially deleted in new
chr15	49423259	49484460	chr15:49423259-49484460	0	+	49424471	49484460	789624	4	181,143,104,151,	0,1181,59891,61050,
#Partially deleted in new
chr15	49434395	49484520	chr15:49434395-49484520	0	+	49434395	49434395	8553170	3	258,104,211,	0,48755,49914,
#Partially deleted in new
chr15	49489060	49508294	chr15:49489060-49508294	0	-	49489060	49489060	8553170	2	331,84,	0,19150,
#Partially deleted in new
chr15	49574737	49615171	chr15:49574737-49615171	0	-	49574737	49574737	8553170	7	372,105,36,68,232,54,51,	0,2003,2891,13278,15038,36477,40383,
#Partially deleted in new
chr15	49574860	49620822	chr15:49574860-49620822	0	-	49574860	49574860	8553170	6	249,68,232,54,123,192,	0,13155,14915,36354,40260,45770,
#Partially deleted in new
chr15	49576135	49589943	chr15:49576135-49589943	0	-	49576713	49589943	789624	4	710,36,68,168,	0,1493,11880,13640,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	49576493	49620818	chr15:49576493-49620818	1	-	49577209	49615171	789624	8	352,134,68,232,54,123,57,119,	0,678,11522,13282,34721,38627,43640,44206,
#Partially deleted in new
chr15	49576559	49615238	chr15:49576559-49615238	0	-	49588044	49615171	789624	5	286,36,68,54,118,	0,1069,11456,34655,38561,
#Partially deleted in new
chr15	49576740	49620747	chr15:49576740-49620747	0	-	49576740	49615171	789624	8	105,36,68,232,54,123,57,117,	0,888,11275,13035,34474,38380,43393,43890,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	49576760	49620809	chr15:49576760-49620809	1	-	49577209	49615171	789624	8	85,134,36,68,232,54,123,179,	0,411,868,11255,13015,34454,38360,43870,
#Partially deleted in new
chr15	49589775	49620897	chr15:49589775-49620897	0	-	49589775	49589775	8553170	5	232,63,54,123,198,	0,16380,21439,25345,30924,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	49614791	49620816	chr15:49614791-49620816	0	-	49614791	49614791	8553170	2	452,117,	0,5908,
#Partially deleted in new
chr15	49620979	49644049	chr15:49620979-49644049	1	+	49625167	49643578	789624	5	143,319,144,259,719,	0,4133,11179,13556,22351,
#Partially deleted in new
chr15	49621036	49629967	chr15:49621036-49629967	0	+	49625167	49626809	789624	4	86,319,150,381,	0,4076,5707,8550,
#Partially deleted in new
chr15	49621064	49643610	chr15:49621064-49643610	1	+	49625167	49643578	789624	5	129,319,144,259,280,	0,4048,11094,13471,22266,
#Partially deleted in new
chr15	49621068	49625521	chr15:49621068-49625521	0	+	49621068	49621068	8553170	3	54,128,409,	0,2602,4044,
#Partially deleted in new
chr15	49621081	49634595	chr15:49621081-49634595	0	+	49625167	49634595	789624	4	41,319,132,60,	0,4031,11089,13454,
#Partially deleted in new
chr15	49621084	49632177	chr15:49621084-49632177	0	+	49625167	49632177	789624	3	245,319,19,	0,4028,11074,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	49621098	49656232	chr15:49621098-49656232	3	+	49625167	49643578	789624	6	24,128,319,144,259,12902,	0,2572,4014,11060,13437,22232,
#Partially deleted in new
chr15	49794245	49796097	chr15:49794245-49796097	7	+	49794245	49794245	16724991	1	1852,	0,
#Partially deleted in new
chr15	49858237	49876695	chr15:49858237-49876695	0	-	49858237	49858237	8553170	5	2238,131,139,246,53,	0,4007,8108,18040,18405,
#Partially deleted in new
chr15	49858238	50119222	chr15:49858238-50119222	3	-	49860193	50106966	789624	28	2237,131,139,246,84,224,184,148,106,112,165,116,189,166,44,209,197,89,159,83,71,73,62,99,114,59,70,100,	0,4006,8107,18039,21137,39053,39829,42853,58695,60600,62007,65140,72880,75778,103738,114343,121378,122967,129152,138438,143914,152606,180529,186355,189112,215888,248700,260884,
#Partially deleted in new
chr15	49858238	50113316	chr15:49858238-50113316	0	-	50018969	50106966	789624	29	2237,131,139,246,84,224,184,148,106,112,165,116,189,166,44,209,197,89,159,83,71,73,88,62,99,114,59,70,119,	0,4006,8107,18039,21137,39053,39829,42853,58695,60600,62007,65140,72880,75778,103738,114343,121378,122967,129152,138438,143914,152606,160650,180529,186355,189112,215888,248700,254959,
#Partially deleted in new
chr15	49858999	50114504	chr15:49858999-50114504	1	-	49860193	50106966	789624	28	1476,131,139,246,84,224,184,148,106,112,165,116,189,166,44,209,197,89,159,83,71,73,62,99,114,59,70,79,	0,3245,7346,17278,20376,38292,39068,42092,57934,59839,61246,64379,72119,75017,102977,113582,120617,122206,128391,137677,143153,151845,179768,185594,188351,215127,247939,255426,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	49859001	49908093	chr15:49859001-49908093	0	-	49859001	49859001	8553170	9	1474,131,139,246,84,224,184,148,49,	0,3243,7344,17276,20374,38290,39066,42090,49043,
#Partially deleted in new
chr15	49859638	50119218	chr15:49859638-50119218	0	-	49898238	50106966	789624	27	837,131,139,246,84,224,184,106,112,165,116,189,166,44,209,197,89,159,83,71,73,62,99,114,59,70,96,	0,2606,6707,16639,19737,37653,38429,57295,59200,60607,63740,71480,74378,102338,112943,119978,121567,127752,137038,142514,151206,179129,184955,187712,214488,247300,259484,
#Partially deleted in new
chr15	49859638	50119226	chr15:49859638-50119226	0	-	50018969	50106966	789624	28	837,131,139,246,84,224,184,148,106,112,165,116,166,44,209,197,89,159,83,71,73,88,62,99,114,59,70,104,	0,2606,6707,16639,19737,37653,38429,41453,57295,59200,60607,63740,74378,102338,112943,119978,121567,127752,137038,142514,151206,159250,179129,184955,187712,214488,247300,259484,
#Partially deleted in new
chr15	49860213	49879588	chr15:49860213-49879588	0	-	49860213	49860213	8553170	5	262,131,139,246,213,	0,2031,6132,16064,19162,
#Partially deleted in new
chr15	49860456	49876606	chr15:49860456-49876606	0	-	49860456	49860456	8553170	4	19,131,139,329,	0,1788,5889,15821,
#Partially deleted in new
chr15	49879603	49883523	chr15:49879603-49883523	3	+	49879603	49879603	8553170	3	869,109,306,	0,981,3614,
#Partially deleted in new
chr15	49880424	49883525	chr15:49880424-49883525	0	+	49880424	49880424	8553170	3	48,109,363,	0,160,2738,
#Partially deleted in new
chr15	49883158	49898221	chr15:49883158-49898221	0	-	49883158	49883158	8553170	4	50,115,224,154,	0,2652,14133,14909,
#Deleted in new
chr15	49894891	49902283	chr15:49894891-49902283	0	-	49894891	49894891	8553170	4	2624,184,148,497,	0,3176,6200,6895,
#Partially deleted in new
chr15	49897434	49917276	chr15:49897434-49917276	0	-	49897434	49897434	8553170	3	81,184,343,	0,633,19499,
#Partially deleted in new
chr15	49898145	49917270	chr15:49898145-49917270	0	-	49898145	49898145	8553170	3	106,148,337,	0,2946,18788,
#Partially deleted in new
chr15	49920273	49931234	chr15:49920273-49931234	0	-	49922384	49931234	789624	4	137,182,116,116,	0,1950,3105,10845,
#Partially deleted in new
chr15	49979605	50044674	chr15:49979605-50044674	0	-	49979605	49979605	8553170	8	165,89,159,83,71,73,62,81,	0,1600,7785,17071,22547,31239,59162,64988,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	49982442	49982561	chr15:49982442-49982561	7	+	49982442	49982442	16724991	1	119,	0,
#Partially deleted in new
chr15	49987511	50119457	chr15:49987511-50119457	0	-	49987511	49987511	8553170	3	38,73,126,	0,23333,131820,
#Partially deleted in new
chr15	50009271	50047387	chr15:50009271-50047387	0	-	50009661	50047387	789624	5	405,73,62,99,37,	0,1573,29496,35322,38079,
#Partially deleted in new
chr15	50047391	50182817	chr15:50047391-50182817	0	-	50047391	50106966	789624	4	73,59,70,557,	0,26735,59547,134869,
#Partially deleted in new
chr15	50182195	50236395	chr15:50182195-50236395	3	+	50182427	50236096	789624	10	710,210,159,125,195,91,199,98,131,476,	0,15304,20291,23043,40769,43792,44784,46749,51672,53724,
#Partially deleted in new
chr15	50182232	50236378	chr15:50182232-50236378	1	+	50182427	50236096	789624	9	673,210,125,195,91,199,98,131,459,	0,15267,23006,40732,43755,44747,46712,51635,53687,
#Partially deleted in new
chr15	50191000	50236384	chr15:50191000-50236384	1	+	50202503	50236096	789624	11	104,210,248,159,125,195,91,199,98,131,465,	0,6499,7234,11486,14238,31964,34987,35979,37944,42867,44919,
#Partially deleted in new
chr15	50205352	50226134	chr15:50205352-50226134	0	+	50205352	50205352	8553170	3	11,195,147,	0,17612,20635,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	50221887	50221996	chr15:50221887-50221996	3	+	50221887	50221887	8553170	1	109,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	50241946	50266026	chr15:50241946-50266026	3	-	50242259	50265623	0	12	1060,102,99,91,163,67,144,135,123,114,173,434,	0,1196,6298,10483,10665,11653,12183,12583,15478,16457,21288,23646,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	50241946	50253305	chr15:50241946-50253305	0	-	50241946	50241946	8553170	5	1060,102,99,91,694,	0,1196,6298,10483,10665,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	50242012	50265666	chr15:50242012-50265666	1	-	50242259	50265623	0	11	994,102,91,163,67,144,135,123,114,173,74,	0,1130,10417,10599,11587,12117,12517,15412,16391,21222,23580,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	50244627	50244931	chr15:50244627-50244931	3	-	50244627	50244627	8553170	1	304,	0,
#Partially deleted in new
chr15	50252919	50265726	chr15:50252919-50265726	0	-	50252919	50252919	8553170	5	747,144,135,173,134,	0,1210,1610,10315,12673,
#Partially deleted in new
chr15	50253123	50263315	chr15:50253123-50263315	0	-	50253123	50253123	8553170	5	543,144,135,114,81,	0,1006,1406,5280,10111,
#Partially deleted in new
chr15	50253725	50265965	chr15:50253725-50265965	0	-	50253725	50253725	8553170	6	548,135,123,114,173,373,	0,804,3699,4678,9509,11867,
#Partially deleted in new
chr15	50254551	50263429	chr15:50254551-50263429	0	-	50254551	50263420	789624	4	113,123,114,195,	0,2873,3852,8683,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	50275391	50355408	chr15:50275391-50355408	3	-	50278631	50309798	789624	9	3393,116,186,114,112,195,168,108,424,	0,10676,14091,25397,25865,27537,28574,34299,79593,
#Partially deleted in new
chr15	50277262	50355153	chr15:50277262-50355153	1	-	50278631	50309798	789624	9	1522,116,186,114,148,195,168,108,169,	0,8805,12220,23526,23958,25666,26703,32428,77722,
#Partially deleted in new
chr15	50278401	50355124	chr15:50278401-50355124	1	-	50278631	50304013	789624	8	383,116,186,114,148,195,168,140,	0,7666,11081,22387,22819,24527,25564,76583,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	50278541	50301315	chr15:50278541-50301315	0	-	50282292	50301315	789624	6	243,113,116,186,114,95,	0,3737,7526,10941,22247,22679,
#Partially deleted in new
chr15	50285879	50355198	chr15:50285879-50355198	1	-	50286019	50309798	789624	8	304,186,114,112,195,168,108,214,	0,3603,14909,15377,17049,18086,23811,69105,
#Partially deleted in new
chr15	50285879	50355153	chr15:50285879-50355153	1	-	50286019	50309798	789624	8	304,186,114,148,195,168,108,169,	0,3603,14909,15341,17049,18086,23811,69105,
#Partially deleted in new
chr15	50285881	50355408	chr15:50285881-50355408	1	-	50286019	50309798	789624	9	302,186,114,112,195,168,108,24,424,	0,3601,14907,15375,17047,18084,23809,60490,69103,
#Partially deleted in new
chr15	50285893	50355202	chr15:50285893-50355202	1	-	50286019	50309798	789624	9	290,183,114,112,195,168,108,24,218,	0,3589,14895,15363,17035,18072,23797,60478,69091,
#Partially deleted in new
chr15	50301112	50303999	chr15:50301112-50303999	0	-	50301112	50301112	8553170	2	256,34,	0,2853,
#Partially deleted in new
chr15	50303972	50327329	chr15:50303972-50327329	0	-	50303972	50309798	789624	3	161,108,137,	0,5718,23220,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	50303973	50355191	chr15:50303973-50355191	0	-	50303973	50309798	789624	4	160,108,255,207,	0,5717,10442,51011,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	50347422	50347529	chr15:50347422-50347529	3	-	50347422	50347422	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	50348935	50354861	chr15:50348935-50354861	3	-	50348935	50348935	789624	1	5926,	0,
#Deleted in new
chr15	50354958	50356034	chr15:50354958-50356034	0	+	50354958	50354958	8553170	1	1076,	0,
#Deleted in new
chr15	50355327	50356370	chr15:50355327-50356370	0	+	50355327	50355327	8553170	2	438,271,	0,772,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	50355466	50372202	chr15:50355466-50372202	3	+	50355466	50355466	8553170	2	79,16103,	0,633,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	50355475	50372158	chr15:50355475-50372158	1	+	50355475	50355475	8553170	3	290,158,1829,	0,624,14854,
#Deleted in new
chr15	50355544	50356414	chr15:50355544-50356414	0	+	50355544	50355544	8553170	2	239,315,	0,555,
#Deleted in new
chr15	50355552	50356436	chr15:50355552-50356436	0	+	50355552	50355552	8553170	2	380,337,	0,547,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	50359449	50360194	chr15:50359449-50360194	3	-	50359449	50359449	8553170	2	283,329,	0,416,
#Deleted in new
chr15	50360328	50360410	chr15:50360328-50360410	3	+	50360328	50360328	5263520	1	82,	0,
#Deleted in new
chr15	50417384	50418692	chr15:50417384-50418692	7	+	50417384	50417384	16724991	1	1308,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	50424379	50449440	chr15:50424379-50449440	0	+	50439073	50449440	789624	5	135,162,169,145,41,	0,7958,14629,16969,25020,
#Partially deleted in new
chr15	50424381	50499776	chr15:50424381-50499776	1	+	50439073	50499088	0	20	133,169,145,86,163,43,145,163,145,224,585,87,81,263,213,211,237,143,133,874,	0,14627,16967,25018,34618,37898,40665,47251,52467,52894,57099,59893,65419,65881,68319,69688,71466,72707,74214,74521,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr15	50424381	50514419	chr15:50424381-50514419	3	+	50439073	50499088	0	20	273,169,145,86,163,43,145,163,145,224,585,87,81,263,213,211,237,143,133,15517,	0,14627,16967,25018,34618,37898,40665,47251,52467,52894,57099,59893,65419,65881,68319,69688,71466,72707,74214,74521,
#Partially deleted in new
chr15	50424381	50459134	chr15:50424381-50459134	0	+	50424381	50424381	8553170	4	133,169,145,135,	0,14627,16967,34618,
#Partially deleted in new
chr15	50424386	50499415	chr15:50424386-50499415	1	+	50439073	50499088	0	17	128,169,163,43,145,163,145,224,585,81,263,213,211,237,143,133,513,	0,14622,34613,37893,40660,47246,52462,52889,57094,65414,65876,68314,69683,71461,72702,74209,74516,
#Partially deleted in new
chr15	50424398	50444616	chr15:50424398-50444616	0	+	50424398	50424398	8553170	4	256,169,145,46,	0,14610,16950,20172,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	50424404	50481702	chr15:50424404-50481702	0	+	50439073	50481702	789624	12	250,162,169,145,86,163,43,145,163,145,224,222,	0,7933,14604,16944,24995,34595,37875,40642,47228,52444,52871,57076,
#Partially deleted in new
chr15	50424404	50462305	chr15:50424404-50462305	0	+	50424404	50424404	8553170	4	250,86,163,26,	0,24995,34595,37875,
#Partially deleted in new
chr15	50424414	50481705	chr15:50424414-50481705	0	+	50439073	50465079	789624	10	100,169,145,86,43,145,163,149,224,225,	0,14594,16934,24985,37865,40632,47218,52434,52861,57066,
#Partially deleted in new
chr15	50424426	50481682	chr15:50424426-50481682	1	+	50439073	50449484	789624	10	228,169,86,163,43,145,163,145,224,202,	0,14582,24973,34573,37853,40620,47206,52422,52849,57054,
#Partially deleted in new
chr15	50424447	50441463	chr15:50424447-50441463	0	+	50439073	50441463	789624	4	67,59,169,115,	0,148,14561,16901,
#Partially deleted in new
chr15	50424493	50465173	chr15:50424493-50465173	0	+	50439073	50449484	789624	6	21,169,86,163,43,127,	0,14515,24906,34506,37786,40553,
#Partially deleted in new
chr15	50426893	50459070	chr15:50426893-50459070	0	+	50439073	50459070	789624	5	27,169,145,86,71,	0,12115,14455,22506,32106,
#Partially deleted in new
chr15	50439025	50462310	chr15:50439025-50462310	0	+	50439073	50449484	789624	4	152,86,163,31,	0,10374,19974,23254,
#Partially deleted in new
chr15	50439042	50481705	chr15:50439042-50481705	0	+	50439073	50477318	789624	5	135,145,86,224,225,	0,2306,10357,38233,42438,
#Partially deleted in new
chr15	50458502	50471735	chr15:50458502-50471735	0	+	50458502	50458502	8553170	5	81,163,43,145,103,	0,497,3777,6544,13130,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	50463380	50463498	chr15:50463380-50463498	7	+	50463380	50463380	16724991	1	118,	0,
#Deleted in new
chr15	50466737	50467096	chr15:50466737-50467096	7	+	50466737	50466737	16724991	1	359,	0,
#Deleted in new
chr15	50489493	50490430	chr15:50489493-50490430	0	+	50489493	50489493	8553170	2	388,168,	0,769,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	50493184	50499695	chr15:50493184-50499695	0	+	50493184	50493184	8553170	5	1096,237,143,133,793,	0,2663,3904,5411,5718,
#Partially deleted in new
chr15	50494017	50497080	chr15:50494017-50497080	3	-	50494017	50494017	8553170	2	113,184,	0,2879,
#Deleted in new
chr15	50497194	50498744	chr15:50497194-50498744	3	-	50497194	50497194	8553170	3	167,58,442,	0,445,1108,
#Deleted in new
chr15	50498496	50499407	chr15:50498496-50499407	0	+	50498496	50498496	8553170	2	232,505,	0,406,
#Partially deleted in new
chr15	50500561	50546699	chr15:50500561-50546699	3	-	50500768	50546525	789624	7	276,133,143,216,196,195,227,	0,29235,38147,40487,43036,44025,45911,
#Partially deleted in new
chr15	50500561	50546705	chr15:50500561-50546705	1	-	50500768	50546525	789624	8	276,133,143,216,221,2,195,233,	0,29235,38147,40487,43036,43430,44025,45911,
#Partially deleted in new
chr15	50500798	50546666	chr15:50500798-50546666	0	-	50541131	50546525	789624	5	39,133,143,216,194,	0,28998,37910,40250,45674,
#Partially deleted in new
chr15	50500885	50546708	chr15:50500885-50546708	0	-	50500885	50500885	8553170	4	166,133,143,236,	0,28911,37823,45587,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	50513409	50538836	chr15:50513409-50538836	0	-	50532097	50538836	789624	4	103,133,216,128,	0,16387,18602,25299,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	50552472	50575008	chr15:50552472-50575008	0	-	50552599	50575008	789624	6	225,107,52,206,83,157,	0,17414,17631,21801,22164,22379,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr15	50557157	50686815	chr15:50557157-50686815	3	-	50561677	50686533	789624	39	4651,107,52,206,83,284,66,51,26,35,71,97,65,716,133,185,127,175,279,129,144,156,229,281,135,141,54,135,101,73,124,175,172,125,214,199,39,80,285,	0,12729,12946,17116,17479,17694,18566,18711,21481,23716,25931,29234,32434,34753,36459,37271,39097,41964,47708,50042,52423,52648,53935,55391,56549,56965,62587,67008,70991,74259,75711,77224,80264,82266,86182,91529,100623,105809,129373,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr15	50557157	50686797	chr15:50557157-50686797	1	-	50561677	50686533	789624	39	4651,107,52,206,83,284,66,51,26,35,71,97,65,716,133,185,127,175,279,129,144,156,229,281,135,141,54,135,101,73,124,175,172,125,214,199,39,80,267,	0,12729,12946,17116,17479,17694,18566,18711,21481,23716,25931,29234,32434,34753,36459,37271,39097,41964,47708,50042,52423,52648,53935,55391,56549,56965,62587,67008,70991,74259,75711,77224,80264,82266,86182,91529,100623,105809,129373,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	50557600	50560500	chr15:50557600-50560500	3	+	50557600	50557600	8553170	3	98,6,502,	0,1022,2398,
#Partially deleted in new
chr15	50560292	50686771	chr15:50560292-50686771	1	-	50561677	50686533	789624	39	1516,107,52,206,83,284,66,51,26,35,68,97,65,716,133,185,127,175,279,129,144,156,229,281,135,141,54,135,101,73,124,175,172,125,214,199,39,80,241,	0,9594,9811,13981,14344,14559,15431,15576,18346,20581,22796,26099,29299,31618,33324,34136,35962,38829,44573,46907,49288,49513,50800,52256,53414,53830,59452,63873,67856,71124,72576,74089,77129,79131,83047,88394,97488,102674,126238,
#Partially deleted in new
chr15	50561639	50582469	chr15:50561639-50582469	0	-	50561639	50561639	8553170	10	169,107,52,206,83,284,196,26,35,35,	0,8247,8464,12634,12997,13212,14084,16999,19234,20795,
#Partially deleted in new
chr15	50569968	50575085	chr15:50569968-50575085	0	-	50569968	50569968	8553170	4	25,52,206,449,	0,135,4305,4668,
#Partially deleted in new
chr15	50574958	50582464	chr15:50574958-50582464	0	-	50574958	50574958	8553170	6	177,66,51,106,35,30,	0,765,910,3600,5915,7476,
#Partially deleted in new
chr15	50575027	50586582	chr15:50575027-50586582	0	-	50575027	50575027	8553170	6	108,196,26,35,68,191,	0,696,3611,5846,8061,11364,
#Partially deleted in new
chr15	50583023	50592038	chr15:50583023-50592038	0	-	50583023	50583023	8553170	4	133,97,65,128,	0,3368,6568,8887,
#Partially deleted in new
chr15	50593618	50599665	chr15:50593618-50599665	0	-	50593618	50593618	8553170	4	131,185,127,544,	0,810,2636,5503,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	50603946	50624216	chr15:50603946-50624216	0	-	50604856	50624216	789624	10	1198,129,144,156,229,281,135,141,54,51,	0,3253,5634,5859,7146,8602,9760,10176,15798,20219,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	50688899	50689193	chr15:50688899-50689193	3	+	50688899	50688899	8553170	1	294,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr15	50702265	50765808	chr15:50702265-50765808	3	-	50707799	50765533	789624	15	5609,161,78,103,57,75,82,102,97,149,134,90,183,111,341,	0,17674,19858,22955,24055,28699,30337,33835,34378,37414,45229,45847,46422,47370,63202,
#Partially deleted in new
chr15	50707447	50747531	chr15:50707447-50747531	0	-	50707799	50747531	789624	12	427,161,78,103,54,57,75,82,102,97,149,37,	0,12492,14676,17773,18625,18873,23517,25155,28653,29196,32232,40047,
#Partially deleted in new
chr15	50722140	50726327	chr15:50722140-50726327	0	-	50722140	50722140	8553170	3	61,103,255,	0,3080,3932,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	50722172	50725519	chr15:50722172-50725519	0	-	50722172	50722172	8553170	2	29,299,	0,3048,
#Partially deleted in new
chr15	50725915	50747508	chr15:50725915-50747508	0	-	50725915	50725915	8553170	6	462,75,102,97,149,14,	0,5049,10185,10728,13764,21579,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	50742701	50743276	chr15:50742701-50743276	3	-	50742701	50742701	8553170	1	575,	0,
#Partially deleted in new
chr15	50747503	50764561	chr15:50747503-50764561	0	-	50747503	50749686	789624	5	125,90,183,111,55,	0,609,1184,2132,17003,
#Partially deleted in new
chr15	50747996	50765709	chr15:50747996-50765709	0	-	50747996	50747996	8553170	4	206,183,111,242,	0,691,1639,17471,
#Deleted in new
chr15	50798669	50798951	chr15:50798669-50798951	7	+	50798669	50798669	16724991	1	282,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	50839874	50881015	chr15:50839874-50881015	0	-	50839874	50839874	8553170	4	131,105,155,88,	0,28734,34697,41053,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	50839875	50908599	chr15:50839875-50908599	3	-	50839875	50839875	8553170	5	1881,92,155,222,48,	0,12573,34696,50980,68676,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	50839878	50860931	chr15:50839878-50860931	0	-	50839878	50839878	8553170	5	127,256,102,92,77,	0,805,1776,12570,20976,
#Partially deleted in new
chr15	50908671	50950149	chr15:50908671-50950149	0	+	50908778	50941738	789624	13	257,72,124,74,122,160,167,74,123,78,140,113,99,	0,3406,6776,15259,16426,20337,22133,25952,32770,33026,39348,41154,41379,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr15	50908672	51005900	chr15:50908672-51005900	3	+	50908778	51002662	789624	21	256,72,124,74,122,160,167,74,123,110,140,113,119,303,115,124,256,558,191,158,3399,	0,3405,6775,15258,16425,20336,22132,25951,32769,32993,39347,41153,41378,49819,59590,75349,84697,88653,90399,92353,93829,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr15	50908672	51003217	chr15:50908672-51003217	0	+	50908778	50934632	789624	21	256,72,124,74,122,160,167,162,123,110,140,115,119,303,115,124,256,558,191,158,716,	0,3405,6775,15258,16425,20336,22132,25863,32769,32993,39347,41151,41378,49819,59590,75349,84697,88653,90399,92353,93829,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr15	50908672	51003217	chr15:50908672-51003217	0	+	50915450	50941454	789624	20	256,72,147,74,122,160,167,123,110,140,113,119,303,115,124,256,558,191,158,716,	0,3405,6752,15258,16425,20336,22132,32769,32993,39347,41153,41378,49819,59590,75349,84697,88653,90399,92353,93829,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr15	50908794	51005894	chr15:50908794-51005894	1	+	50915450	51002662	789624	21	134,72,147,74,122,160,167,74,123,110,140,113,119,303,115,124,256,558,191,158,3393,	0,3283,6630,15136,16303,20214,22010,25829,32647,32871,39225,41031,41256,49697,59468,75227,84575,88531,90277,92231,93707,
#Deleted in new
chr15	50944662	50945996	chr15:50944662-50945996	7	+	50944662	50944662	16724991	1	1334,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	50997748	51003441	chr15:50997748-51003441	0	+	50997748	50997748	8553170	3	135,158,940,	0,3277,4753,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	51037487	51293912	chr15:51037487-51293912	3	+	51037487	51037487	789624	3	194,68,299,	0,240495,256126,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	51056597	51105276	chr15:51056597-51105276	1	-	51057880	51105176	0	3	1846,144,272,	0,37946,48407,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	51056603	51094705	chr15:51056603-51094705	3	-	51057880	51094595	789624	2	1840,162,	0,37940,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	51056676	51094501	chr15:51056676-51094501	0	-	51056676	51056676	8553170	2	1767,91,	0,37734,
#Partially deleted in new
chr15	51064608	51069586	chr15:51064608-51069586	3	-	51064608	51064608	8553170	2	210,98,	0,4880,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	51208056	51338610	chr15:51208056-51338610	3	-	51210807	51242912	0	10	3000,242,163,115,115,177,155,151,183,116,	0,4263,7013,7646,10484,14292,19722,28802,34711,130438,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	51210180	51338596	chr15:51210180-51338596	1	-	51210807	51242912	0	11	876,242,163,115,115,177,155,151,183,109,102,	0,2139,4889,5522,8360,12168,17598,26678,32587,113635,128314,
#Partially deleted in new
chr15	51210513	51243064	chr15:51210513-51243064	1	-	51210807	51242912	0	9	543,242,163,115,115,177,155,151,297,	0,1806,4556,5189,8027,11835,17265,26345,32254,
#Deleted in new
chr15	51210980	51215987	chr15:51210980-51215987	0	-	51210980	51210980	8553170	4	76,242,163,285,	0,1339,4089,4722,
#Deleted in new
chr15	51212258	51215224	chr15:51212258-51215224	0	-	51212301	51215224	789624	2	303,155,	0,2811,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	51212526	51338598	chr15:51212526-51338598	0	-	51212526	51242912	789624	10	35,163,115,115,177,155,151,183,244,104,	0,2543,3176,6014,9822,15252,24332,30241,42991,125968,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	51212526	51338596	chr15:51212526-51338596	0	-	51212526	51242912	789624	9	35,163,115,115,177,155,151,183,102,	0,2543,3176,6014,9822,15252,24332,30241,125968,
#Partially deleted in new
chr15	51215031	51222354	chr15:51215031-51222354	0	-	51215031	51215031	8553170	4	201,115,115,6,	0,671,3509,7317,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	51215181	51338596	chr15:51215181-51338596	0	-	51215181	51242912	789624	7	51,115,115,155,151,183,102,	0,521,3359,12597,21677,27586,123313,
#Partially deleted in new
chr15	51215786	51218548	chr15:51215786-51218548	0	-	51215786	51215786	8553170	2	31,95,	0,2667,
#Partially deleted in new
chr15	51215786	51218548	chr15:51215786-51218548	1	-	51215786	51218548	789624	3	31,83,9,	0,2667,2753,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	51218557	51338601	chr15:51218557-51338601	0	-	51218557	51242912	789624	7	98,177,155,151,183,191,107,	0,3791,9221,18301,24210,36960,119937,
#Partially deleted in new
chr15	51221378	51243011	chr15:51221378-51243011	1	-	51222319	51242912	0	4	1147,155,151,244,	0,6400,15480,21389,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	51222263	51338575	chr15:51222263-51338575	1	-	51222319	51242912	0	5	262,155,151,183,81,	0,5515,14595,20504,116231,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	51222460	51338598	chr15:51222460-51338598	0	-	51222460	51242912	789624	7	65,155,151,183,244,91,104,	0,5318,14398,20307,33057,115357,116034,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	51222478	51338597	chr15:51222478-51338597	0	-	51222478	51242912	789624	6	47,155,151,183,155,103,	0,5300,14380,20289,55529,116016,
#Partially deleted in new
chr15	51222482	51318492	chr15:51222482-51318492	0	-	51222482	51242912	789624	5	43,155,151,183,60,	0,5296,14376,20285,95950,
#Deleted in new
chr15	51242189	51242264	chr15:51242189-51242264	3	+	51242189	51242189	5263520	1	75,	0,
#Deleted in new
chr15	51277135	51278160	chr15:51277135-51278160	0	-	51277135	51277135	8553170	2	252,153,	0,872,
#Deleted in new
chr15	51278926	51280015	chr15:51278926-51280015	3	-	51278926	51278926	8553170	2	201,162,	0,927,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	51312226	51338581	chr15:51312226-51338581	0	-	51312226	51312226	8553170	4	958,567,146,87,	0,6206,8001,26268,
#Deleted in new
chr15	51314031	51314107	chr15:51314031-51314107	3	-	51314031	51314031	5263520	1	76,	0,
#Deleted in new
chr15	51314033	51314109	chr15:51314033-51314109	3	+	51314033	51314033	5263520	1	76,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	51315840	51321996	chr15:51315840-51321996	3	+	51315840	51315840	8553170	3	297,91,388,	0,5108,5768,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	51341628	51408013	chr15:51341628-51408013	3	+	51341684	51404754	789624	10	419,52,18,108,147,129,84,126,151,3737,	0,35820,41807,42156,53206,55841,58563,58744,59964,62648,
#Partially deleted in new
chr15	51341797	51385552	chr15:51341797-51385552	0	+	51341797	51383918	789624	4	250,52,18,1768,	0,35651,41638,41987,
#Partially deleted in new
chr15	51341873	51384634	chr15:51341873-51384634	0	+	51341873	51341873	8553170	3	174,18,850,	0,41562,41911,
#Partially deleted in new
chr15	51341945	51384633	chr15:51341945-51384633	0	+	51341945	51341945	8553170	4	140,52,18,849,	0,35503,41490,41839,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	51351099	51351192	chr15:51351099-51351192	7	-	51351099	51351099	16724991	1	93,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	51360253	51384414	chr15:51360253-51384414	0	+	51360253	51360253	8553170	4	284,52,18,630,	0,17195,23182,23531,
#Partially deleted in new
chr15	51367376	51369110	chr15:51367376-51369110	3	+	51367376	51367376	8553170	2	99,75,	0,1659,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	51377257	51408005	chr15:51377257-51408005	1	+	51377457	51404754	789624	10	40,52,18,108,147,129,84,126,151,3729,	0,191,6178,6527,17577,20212,22934,23115,24335,27019,
#Partially deleted in new
chr15	51377257	51385552	chr15:51377257-51385552	0	+	51377257	51377257	8553170	3	243,18,1768,	0,6178,6527,
#Partially deleted in new
chr15	51377347	51384222	chr15:51377347-51384222	0	+	51377347	51377347	8553170	2	153,438,	0,6437,
#Partially deleted in new
chr15	51377351	51400211	chr15:51377351-51400211	0	+	51377427	51400211	789624	6	149,18,108,147,129,20,	0,6084,6433,17483,20118,22840,
#Partially deleted in new
chr15	51377455	51405244	chr15:51377455-51405244	1	+	51377457	51404754	789624	10	45,18,108,147,129,84,126,151,659,209,	0,5980,6329,17379,20014,22736,22917,24137,26821,27580,
#Partially deleted in new
chr15	51447710	51622833	chr15:51447710-51622833	3	-	51448983	51622545	789624	43	1483,218,53,92,78,128,61,139,122,87,118,202,86,128,179,249,128,77,192,1082,265,166,98,170,111,1680,228,120,118,90,122,697,272,240,175,184,179,67,136,79,72,126,375,	0,2418,3934,5839,7440,8355,8598,9617,10795,10998,15668,16964,17855,18473,23512,26633,28878,30560,32237,32831,38362,40243,40837,43867,47313,50841,55095,59423,66731,69367,87952,88455,89777,90502,94622,97872,99519,115670,116414,117377,120776,128345,174748,
#Partially deleted in new
chr15	51447775	51481479	chr15:51447775-51481479	0	-	51448983	51481479	789624	21	1418,218,53,92,78,128,61,139,122,87,63,118,202,86,128,179,249,131,77,192,938,	0,2353,3869,5774,7375,8290,8533,9552,10730,10933,11822,15603,16899,17790,18408,23447,26568,28813,30495,32172,32766,
#Partially deleted in new
chr15	51447787	51622635	chr15:51447787-51622635	1	-	51448983	51622545	789624	43	1406,218,53,92,78,128,61,139,122,87,118,202,86,128,179,249,131,77,192,1082,265,166,98,170,111,1680,228,120,118,90,122,697,272,240,175,184,179,67,136,79,72,126,177,	0,2341,3857,5762,7363,8278,8521,9540,10718,10921,15591,16887,17778,18396,23435,26556,28801,30483,32160,32754,38285,40166,40760,43790,47236,50764,55018,59346,66654,69290,87875,88378,89700,90425,94545,97795,99442,115593,116337,117300,120699,128268,174671,
#Partially deleted in new
chr15	51447790	51450673	chr15:51447790-51450673	0	-	51447790	51447790	8553170	2	1403,545,	0,2338,
#Partially deleted in new
chr15	51448811	51622635	chr15:51448811-51622635	1	-	51448983	51622545	789624	41	382,218,53,92,78,128,61,139,122,87,118,202,86,128,179,249,128,77,192,1082,265,166,98,170,111,120,118,90,122,697,272,240,175,184,179,67,136,79,72,126,177,	0,1317,2833,4738,6339,7254,7497,8516,9694,9897,14567,15863,16754,17372,22411,25532,27777,29459,31136,31730,37261,39142,39736,42766,46212,58322,65630,68266,86851,87354,88676,89401,93521,96771,98418,114569,115313,116276,119675,127244,173647,
#Partially deleted in new
chr15	51450194	51455213	chr15:51450194-51455213	0	-	51450270	51455213	789624	3	152,92,63,	0,3355,4956,
#Partially deleted in new
chr15	51453247	51456318	chr15:51453247-51456318	0	-	51453247	51453247	8553170	4	394,78,128,10,	0,1903,2818,3061,
#Partially deleted in new
chr15	51456312	51458878	chr15:51456312-51458878	0	-	51456312	51456312	8553170	3	57,139,373,	0,1015,2193,
#Partially deleted in new
chr15	51456324	51459782	chr15:51456324-51459782	0	-	51456324	51456324	8553170	5	45,139,122,87,185,	0,1003,2181,2384,3273,
#Deleted in new
chr15	51457285	51460582	chr15:51457285-51460582	3	+	51457285	51457285	8553170	2	768,285,	0,3012,
#Deleted in new
chr15	51457371	51459190	chr15:51457371-51459190	0	-	51457371	51457371	8553170	3	95,122,482,	0,1134,1337,
#Partially deleted in new
chr15	51457446	51471350	chr15:51457446-51471350	0	-	51458790	51471350	789624	6	20,122,87,86,128,128,	0,1059,1262,8119,8737,13776,
#Deleted in new
chr15	51457903	51460567	chr15:51457903-51460567	1	+	51457903	51457903	8553170	3	150,210,270,	0,816,2394,
#Deleted in new
chr15	51457915	51460566	chr15:51457915-51460566	0	+	51457915	51457915	8553170	3	138,210,212,	0,804,2439,
#Partially deleted in new
chr15	51463075	51471236	chr15:51463075-51471236	0	-	51463075	51463075	8553170	5	421,202,86,128,14,	0,1599,2490,3108,8147,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	51567042	51622770	chr15:51567042-51622770	0	-	51567042	51567042	8553170	3	1516,126,312,	0,9013,55416,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	51681352	51721031	chr15:51681352-51721031	3	+	51681755	51719526	789624	12	485,53,46,216,143,150,178,117,84,138,81,1624,	0,1164,1726,1866,6907,7866,10806,14522,17966,19754,31980,38055,
#Partially deleted in new
chr15	51681491	51720071	chr15:51681491-51720071	1	+	51692164	51719526	789624	11	346,46,216,143,150,178,117,84,138,81,664,	0,1587,1727,6768,7727,10667,14383,17827,19615,31841,37916,
#Partially deleted in new
chr15	51681531	51692336	chr15:51681531-51692336	0	+	51692164	51692336	789624	5	306,46,216,150,178,	0,1547,1687,7687,10627,
#Partially deleted in new
chr15	51693215	51695765	chr15:51693215-51695765	3	-	51693215	51693215	8553170	2	722,133,	0,2417,
#Partially deleted in new
chr15	51707994	51715220	chr15:51707994-51715220	3	-	51707994	51707994	8553170	3	280,57,50,	0,5105,7176,
#Partially deleted in new
chr15	51723010	51738137	chr15:51723010-51738137	3	-	51723606	51737622	789624	3	639,332,788,	0,1779,14339,
#Partially deleted in new
chr15	51723068	51751585	chr15:51723068-51751585	1	-	51723606	51725121	789624	3	581,332,315,	0,1721,28202,
#Partially deleted in new
chr15	51723237	51738121	chr15:51723237-51738121	1	-	51723606	51725121	789624	3	412,332,282,	0,1552,14602,
#Partially deleted in new
chr15	51723243	51751437	chr15:51723243-51751437	1	-	51723606	51751352	789624	3	406,202,167,	0,1546,28027,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	51751560	51816368	chr15:51751560-51816368	3	+	51766441	51808454	789624	10	152,195,157,123,87,131,108,144,145,7949,	0,14812,16701,22151,25371,29483,31160,46636,54816,56859,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	51751614	51784980	chr15:51751614-51784980	0	+	51751614	51751614	8553170	3	98,698,1552,	0,14758,31814,
#Partially deleted in new
chr15	51751666	51808881	chr15:51751666-51808881	1	+	51766441	51808454	789624	9	46,195,157,123,87,131,144,145,462,	0,14706,16595,22045,25265,29377,46530,54710,56753,
#Deleted in new
chr15	51752484	51756475	chr15:51752484-51756475	3	+	51752484	51752484	8553170	2	418,163,	0,3828,
#Partially deleted in new
chr15	51781048	51783136	chr15:51781048-51783136	0	+	51781048	51781048	8553170	2	126,416,	0,1672,
#Partially deleted in new
chr15	51782821	51810292	chr15:51782821-51810292	0	+	51782821	51808454	789624	5	7,144,145,125,114,	0,15375,23555,25598,27357,
#Partially deleted in new
chr15	51829627	51862983	chr15:51829627-51862983	0	+	51862884	51862983	789624	3	209,65,173,	0,5366,33183,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	51829629	51915725	chr15:51829629-51915725	3	+	51862884	51908810	789624	10	207,200,157,123,90,131,108,144,145,6950,	0,33181,39587,57959,59426,64185,66789,70525,72262,79146,
#Deleted in new
chr15	51833133	51833426	chr15:51833133-51833426	3	+	51833133	51833133	8553170	1	293,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	51858069	51858352	chr15:51858069-51858352	3	-	51858069	51858069	8553170	1	283,	0,
#Partially deleted in new
chr15	51859184	51861293	chr15:51859184-51861293	7	-	51859184	51859184	16724991	2	1459,341,	0,1768,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	51875025	51929454	chr15:51875025-51929454	0	+	51889066	51908810	789624	12	245,123,90,131,108,144,145,87,139,119,121,22,	0,12563,14030,18789,21393,25129,26866,33750,35988,40989,46470,54407,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	51884555	51884653	chr15:51884555-51884653	3	+	51884555	51884555	8553170	1	98,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	51887559	51901123	chr15:51887559-51901123	3	-	51887559	51887559	8553170	4	159,123,123,105,	0,4796,11452,13459,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	51893814	51931308	chr15:51893814-51931308	0	+	51893814	51908810	789624	8	131,108,144,145,101,113,119,278,	0,2604,6340,8077,14961,17225,22200,37216,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	51907199	51907305	chr15:51907199-51907305	3	+	51907199	51907199	8553170	1	106,	0,
#Deleted in new
chr15	51908901	51909642	chr15:51908901-51909642	3	-	51908901	51908901	8553170	2	456,54,	0,687,
#Partially deleted in new
chr15	51919072	51930627	chr15:51919072-51930627	7	-	51919072	51919072	16724991	9	73,90,187,138,136,90,85,145,97,	0,2711,3649,4967,6673,7708,9134,10261,11458,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	51921493	51947295	chr15:51921493-51947295	0	+	51921493	51921493	8553170	3	123,105,306,	0,12756,25496,
#Partially deleted in new
chr15	51921508	51947294	chr15:51921508-51947294	0	+	51921508	51921508	8553170	2	108,305,	0,25481,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	51924391	51931308	chr15:51924391-51931308	0	+	51924391	51924391	8553170	2	187,278,	0,6639,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	51931051	51947295	chr15:51931051-51947295	0	+	51931051	51931051	8553170	3	82,105,306,	0,3198,15938,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	51933976	51937054	chr15:51933976-51937054	0	+	51933976	51933976	8553170	2	378,425,	0,2653,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	51934202	51947267	chr15:51934202-51947267	0	+	51934202	51934202	8553170	2	152,278,	0,12787,
#Partially deleted in new
chr15	51938024	51971806	chr15:51938024-51971806	3	-	51938155	51971745	0	12	236,98,187,136,135,95,85,146,95,105,756,119,	0,9267,11783,13819,15104,16456,20717,21874,22614,24364,27724,33663,
#Partially deleted in new
chr15	51938026	51971776	chr15:51938026-51971776	1	-	51938155	51971745	0	10	234,98,187,136,135,146,95,105,756,89,	0,9265,11781,13817,15102,21872,22612,24362,27722,33661,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	51952105	52046065	chr15:51952105-52046065	0	+	51952105	51952105	8553170	3	178,138,236,	0,52159,93724,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	51953214	51955061	chr15:51953214-51955061	0	-	51953214	51953214	8553170	2	49,581,	0,1266,
#Partially deleted in new
chr15	52004179	52046109	chr15:52004179-52046109	0	+	52004179	52004179	8553170	3	223,80,280,	0,38574,41650,
#Partially deleted in new
chr15	52004207	52046208	chr15:52004207-52046208	0	+	52004207	52004207	8553170	2	195,379,	0,41622,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	52017166	52018032	chr15:52017166-52018032	3	-	52017166	52017166	8553170	1	866,	0,
#Partially deleted in new
chr15	52019200	52067372	chr15:52019200-52067372	3	+	52046460	52065000	0	6	176,1186,145,165,202,3471,	0,26629,30792,39432,42098,44701,
#Partially deleted in new
chr15	52019237	52046124	chr15:52019237-52046124	0	+	52019237	52019237	8553170	3	139,80,295,	0,23516,26592,
#Partially deleted in new
chr15	52019921	52046374	chr15:52019921-52046374	0	+	52019921	52019921	8553170	2	111,545,	0,25908,
#Partially deleted in new
chr15	52021463	52046311	chr15:52021463-52046311	0	+	52021463	52021463	8553170	2	101,482,	0,24366,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	52056674	52100523	chr15:52056674-52100523	3	-	52056674	52056674	8553170	2	581,54,	0,43795,
#Deleted in new
chr15	52095294	52095747	chr15:52095294-52095747	7	+	52095294	52095294	16724991	1	453,	0,
#Partially deleted in new
chr15	52109262	52112775	chr15:52109262-52112775	3	-	52109847	52112726	789624	2	711,538,	0,2975,
#Partially deleted in new
chr15	52109749	52112768	chr15:52109749-52112768	1	-	52109806	52112726	789624	2	224,601,	0,2418,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr15	52115104	52191369	chr15:52115104-52191369	3	-	52122756	52184676	789624	13	7664,167,97,49,92,144,133,77,42,137,112,144,48,	0,9368,10843,13091,18273,20508,26035,32354,34779,38835,64663,69446,76217,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	52116573	52122131	chr15:52116573-52122131	3	+	52116573	52116573	8553170	2	395,479,	0,5079,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	52120938	52179887	chr15:52120938-52179887	1	-	52122756	52179879	789624	9	1830,167,97,49,92,144,42,137,120,	0,3534,5009,7257,12439,14674,28945,33001,58829,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	52121625	52128795	chr15:52121625-52128795	0	-	52121625	52121625	8553170	4	1143,167,97,600,	0,2847,4322,6570,
#Partially deleted in new
chr15	52122205	52180001	chr15:52122205-52180001	1	-	52122756	52179879	789624	11	563,167,97,49,92,144,133,77,42,137,234,	0,2267,3742,5990,11172,13407,18934,25253,27678,31734,57562,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	52122208	52139955	chr15:52122208-52139955	0	-	52122208	52122208	8553170	8	560,167,97,49,92,144,965,143,	0,2264,3739,5987,11169,13404,14771,17604,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	52123558	52128273	chr15:52123558-52128273	0	-	52123558	52123558	8553170	3	66,881,78,	0,1605,4637,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	52124472	52141211	chr15:52124472-52141211	0	-	52128691	52141211	789624	7	167,97,49,52,92,144,72,	0,1475,3723,4171,8905,11140,16667,
#Partially deleted in new
chr15	52124538	52135847	chr15:52124538-52135847	0	-	52124538	52124538	8553170	5	285,97,49,92,235,	0,1409,3657,8839,11074,
#Partially deleted in new
chr15	52124560	52139035	chr15:52124560-52139035	3	+	52124560	52124560	8553170	4	90,108,88,609,	0,1054,1469,13866,
#Partially deleted in new
chr15	52135688	52179973	chr15:52135688-52179973	0	-	52141260	52179879	789624	5	68,133,42,137,206,	0,5451,14195,18251,44079,
#Partially deleted in new
chr15	52138427	52140246	chr15:52138427-52140246	1	+	52138427	52138427	8553170	2	180,643,	0,1176,
#Partially deleted in new
chr15	52141205	52144461	chr15:52141205-52144461	0	-	52141205	52141205	8553170	2	67,592,	0,2664,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	52147166	52191334	chr15:52147166-52191334	0	-	52147166	52147166	8553170	6	369,42,137,112,144,13,	0,2717,6773,32601,37384,44155,
#Partially deleted in new
chr15	52149277	52179900	chr15:52149277-52179900	1	-	52149793	52179879	789624	3	648,137,133,	0,4662,30490,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	52162750	52162852	chr15:52162750-52162852	3	+	52162750	52162750	8553170	1	102,	0,
#Partially deleted in new
chr15	52180092	52205334	chr15:52180092-52205334	3	+	52180092	52180092	789624	3	309,153,446,	0,957,24796,
#Partially deleted in new
chr15	52180216	52205874	chr15:52180216-52205874	1	+	52180216	52180216	8553170	2	986,986,	0,24672,
#Boundary problem: need 41, got 0, diff 41, mapped 0.0
chr15	52192321	52295798	chr15:52192321-52295798	3	-	52193901	52295636	0	41	1733,81,175,283,151,90,155,99,88,169,64,94,181,81,64,94,181,64,94,165,147,166,212,112,87,98,135,84,126,141,82,266,107,108,82,144,157,145,166,111,189,	0,3055,3987,12543,13494,16232,19408,20866,22281,26197,27437,28840,31222,32579,32753,33117,36811,40300,43348,45160,47411,49726,52034,53032,53634,54595,55136,56378,59068,60995,64317,68540,71868,77431,79441,80258,83240,86551,87187,90460,103288,
#Boundary problem: need 38, got 0, diff 38, mapped 0.0
chr15	52192658	52295656	chr15:52192658-52295656	0	-	52269800	52295636	789624	38	1396,81,175,283,151,90,155,88,169,64,94,181,81,64,94,181,94,165,147,212,112,87,98,135,84,126,141,82,226,107,35,108,144,157,145,166,111,47,	0,2718,3650,12206,13157,15895,19071,21944,25860,27100,28503,30885,32242,32416,32780,36474,43011,44823,47074,51697,52695,53297,54258,54799,56041,58731,60658,63980,68243,71531,72527,77094,79921,82903,86214,86850,90123,102951,
#Partially deleted in new
chr15	52205047	52213528	chr15:52205047-52213528	0	-	52205047	52205047	8553170	5	100,151,90,155,341,	0,768,3506,6682,8140,
#Partially deleted in new
chr15	52229229	52295769	chr15:52229229-52295769	0	-	52278014	52295636	789624	24	84,64,94,165,212,112,87,98,135,84,126,141,82,226,107,108,82,144,157,184,145,166,111,160,	0,3392,6440,8252,15126,16124,16726,17687,18228,19470,22160,24087,27409,31672,34960,40523,42533,43350,46332,48614,49643,50279,53552,66380,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	52236788	52243559	chr15:52236788-52243559	0	-	52236788	52236788	8553170	3	858,147,1512,	0,2944,5259,
#Partially deleted in new
chr15	52250990	52295744	chr15:52250990-52295744	0	-	52256700	52295636	0	13	525,141,82,226,107,108,82,144,157,145,166,111,135,	0,2326,5648,9911,13199,18762,20772,21589,24571,27882,28518,31791,44619,
#Partially deleted in new
chr15	52251421	52256895	chr15:52251421-52256895	0	-	52251421	52251421	8553170	3	94,141,257,	0,1895,5217,
#Partially deleted in new
chr15	52261006	52295768	chr15:52261006-52295768	0	-	52261006	52261006	8553170	7	121,107,144,157,145,166,159,	0,3183,11573,14555,17866,18502,34603,
#Partially deleted in new
chr15	52272688	52295773	chr15:52272688-52295773	0	-	52272688	52279000	789624	6	35,157,145,166,103,164,	0,2873,6184,6820,10093,22921,
#Deleted in new
chr15	52277116	52277200	chr15:52277116-52277200	3	-	52277116	52277116	5263520	1	84,	0,
#Boundary problem: need 41, got 0, diff 41, mapped 0.0
chr15	52307282	52529050	chr15:52307282-52529050	3	-	52313695	52528806	0	41	6566,81,175,283,151,90,155,147,94,199,81,101,9,228,54,144,114,149,94,249,240,157,212,109,87,98,162,84,126,141,82,266,107,108,82,144,157,145,172,111,271,	0,6840,9765,11777,14076,16072,20569,23070,29180,32913,35834,39078,41535,43971,46322,46588,52685,57271,59748,62886,64841,68021,69064,72342,72539,75808,76878,80546,81955,84647,89033,89918,98004,100009,100776,103050,108862,118547,121115,125892,221497,
#Boundary problem: need 40, got 0, diff 40, mapped 0.0
chr15	52307285	52528880	chr15:52307285-52528880	1	-	52313695	52528806	0	40	6563,81,175,283,151,90,155,147,94,199,101,9,228,54,144,114,149,94,249,240,157,212,109,87,98,162,84,126,141,82,266,107,108,82,144,157,145,172,111,101,	0,6837,9762,11774,14073,16069,20566,23067,29177,32910,39075,41532,43968,46319,46585,52682,57268,59745,62883,64838,68018,69061,72339,72536,75805,76875,80543,81952,84644,89030,89915,98001,100006,100773,103047,108859,118544,121112,125889,221494,
#Boundary problem: need 42, got 0, diff 42, mapped 0.0
chr15	52307287	52529050	chr15:52307287-52529050	1	-	52313695	52528806	789624	42	6561,81,175,283,151,90,147,4,151,94,199,81,101,9,228,54,144,114,149,94,249,240,157,212,109,87,98,162,84,126,141,82,266,107,108,82,144,157,145,172,111,271,	0,6835,9760,11772,14071,16067,20564,21813,23061,29175,32908,35829,39073,41530,43966,46317,46583,52680,57266,59743,62881,64836,68016,69059,72337,72534,75803,76873,80541,81950,84642,89028,89913,97999,100004,100771,103045,108857,118542,121110,125887,221492,
#Boundary problem: need 40, got 0, diff 40, mapped 0.0
chr15	52307287	52529050	chr15:52307287-52529050	1	-	52313695	52528806	789624	40	6561,81,175,283,151,90,155,147,94,199,81,110,228,54,144,114,149,94,249,240,157,212,109,87,98,162,84,126,141,82,266,107,108,82,144,157,145,172,111,271,	0,6835,9760,11772,14071,16067,20564,23065,29175,32908,35829,39073,43966,46317,46583,52680,57266,59743,62881,64836,68016,69059,72337,72534,75803,76873,80541,81950,84642,89028,89913,97999,100004,100771,103045,108857,118542,121110,125887,221492,
#Boundary problem: need 41, got 0, diff 41, mapped 0.0
chr15	52307287	52529050	chr15:52307287-52529050	1	-	52313695	52528806	789624	41	6561,81,175,283,151,90,147,4,151,94,199,101,9,228,54,144,114,149,94,249,240,157,212,109,87,98,162,84,126,141,82,266,107,108,82,144,157,145,172,111,271,	0,6835,9760,11772,14071,16067,20564,21813,23061,29175,32908,39073,41530,43966,46317,46583,52680,57266,59743,62881,64836,68016,69059,72337,72534,75803,76873,80541,81950,84642,89028,89913,97999,100004,100771,103045,108857,118542,121110,125887,221492,
#Partially deleted in new
chr15	52313303	52528841	chr15:52313303-52528841	1	-	52313695	52528806	789624	41	545,81,175,283,151,90,155,147,94,75,199,101,9,228,54,144,114,149,94,249,240,157,212,109,87,98,162,84,126,141,82,266,107,108,82,144,157,145,172,111,62,	0,819,3744,5756,8055,10051,14548,17049,23159,24506,26892,33057,35514,37950,40301,40567,46664,51250,53727,56865,58820,62000,63043,66321,66518,69787,70857,74525,75934,78626,83012,83897,91983,93988,94755,97029,102841,112526,115094,119871,215476,
#Partially deleted in new
chr15	52313695	52351382	chr15:52313695-52351382	0	-	52313695	52351382	789624	12	153,81,175,283,151,90,155,147,94,199,101,129,	0,427,3352,5364,7663,9659,14156,16657,22767,26500,32665,37558,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	52321468	52323896	chr15:52321468-52323896	0	-	52321468	52321468	8553170	2	41,542,	0,1886,
#Partially deleted in new
chr15	52337809	52351481	chr15:52337809-52351481	0	-	52337809	52351481	789624	5	75,199,81,101,228,	0,2386,5307,8551,13444,
#Partially deleted in new
chr15	52337809	52351481	chr15:52337809-52351481	0	-	52337809	52351481	789624	6	75,199,81,101,9,228,	0,2386,5307,8551,11008,13444,
#Partially deleted in new
chr15	52367084	52528880	chr15:52367084-52528880	0	-	52425968	52528806	789624	22	40,249,240,157,212,109,87,98,162,84,126,141,82,266,107,108,82,144,157,145,111,101,	0,3084,5039,8219,9262,12540,12737,16006,17076,20744,22153,24845,29231,30116,38202,40207,40974,43248,49060,58745,66090,161695,
#Partially deleted in new
chr15	52387749	52396385	chr15:52387749-52396385	0	-	52387749	52387749	8553170	4	163,126,141,70,	0,1488,4180,8566,
#Partially deleted in new
chr15	52416004	52425967	chr15:52416004-52425967	0	-	52416004	52416004	8553170	2	297,138,	0,9825,
#Deleted in new
chr15	52505190	52505862	chr15:52505190-52505862	7	+	52505190	52505190	16724991	1	672,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	52547044	52569239	chr15:52547044-52569239	3	-	52551933	52568892	789624	4	5060,123,55,124,	0,10055,21803,22071,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	52547243	52569164	chr15:52547243-52569164	1	-	52551933	52568892	789624	3	4861,123,317,	0,9856,21604,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	52549526	52568832	chr15:52549526-52568832	1	-	52551933	52557219	789624	3	2578,123,544,	0,7573,18762,
#Partially deleted in new
chr15	52551260	52557744	chr15:52551260-52557744	1	-	52551933	52557219	789624	2	844,645,	0,5839,
#Partially deleted in new
chr15	52551366	52569209	chr15:52551366-52569209	1	-	52551933	52557219	789624	3	738,123,94,	0,5733,17749,
#Partially deleted in new
chr15	52551593	52569167	chr15:52551593-52569167	1	-	52551933	52568892	789624	4	511,123,55,56,	0,5506,17254,17518,
#Partially deleted in new
chr15	52551648	52569154	chr15:52551648-52569154	1	-	52551933	52568892	789624	3	456,55,39,	0,17199,17467,
#Partially deleted in new
chr15	52551671	52569167	chr15:52551671-52569167	1	-	52551933	52568892	789624	4	433,123,53,52,	0,5428,17176,17444,
#Partially deleted in new
chr15	52551734	52569015	chr15:52551734-52569015	1	-	52551933	52568892	789624	4	370,123,57,168,	0,5365,12455,17113,
#Partially deleted in new
chr15	52551768	52569167	chr15:52551768-52569167	1	-	52551933	52557219	789624	4	336,123,57,52,	0,5331,12421,17347,
#Partially deleted in new
chr15	52551808	52569883	chr15:52551808-52569883	1	-	52551933	52568892	789624	6	296,123,57,55,106,162,	0,5291,12381,17039,17307,17913,
#Partially deleted in new
chr15	52551919	52557053	chr15:52551919-52557053	0	-	52551919	52551919	8553170	2	185,57,	0,5077,
#Partially deleted in new
chr15	52552008	52569167	chr15:52552008-52569167	0	-	52552008	52557219	789624	3	96,123,56,	0,5091,17103,
#Partially deleted in new
chr15	52577841	52598709	chr15:52577841-52598709	3	+	52577841	52577841	8553170	4	234,110,100,168,	0,6991,12834,20700,
#Partially deleted in new
chr15	52581316	52585323	chr15:52581316-52585323	0	-	52581316	52581316	8553170	2	991,579,	0,3428,
#Partially deleted in new
chr15	52581320	52678623	chr15:52581320-52678623	3	-	52582153	52678021	789624	13	987,200,69,159,109,80,114,1816,126,203,185,117,52,	0,3424,5830,12257,18806,19765,23812,27247,29809,30254,32352,96685,97251,
#Partially deleted in new
chr15	52581320	52678759	chr15:52581320-52678759	0	-	52587135	52678021	789624	13	987,200,164,159,109,80,114,1816,126,203,185,117,330,	0,3424,5735,12257,18806,19765,23812,27247,29809,30254,32352,96685,97109,
#Partially deleted in new
chr15	52581852	52652050	chr15:52581852-52652050	1	-	52582153	52651906	789624	12	455,200,69,159,109,80,114,1816,126,203,185,181,	0,2892,5298,11725,18274,19233,23280,26715,29277,29722,31820,70017,
#Partially deleted in new
chr15	52581931	52678116	chr15:52581931-52678116	1	-	52582153	52678021	789624	12	376,200,69,159,109,80,114,1816,126,203,185,111,	0,2813,5219,11646,18195,19154,23201,26636,29198,29643,31741,96074,
#Partially deleted in new
chr15	52582187	52601164	chr15:52582187-52601164	0	-	52582187	52601164	789624	5	120,200,159,109,79,	0,2557,11390,17939,18898,
#Partially deleted in new
chr15	52584742	52678756	chr15:52584742-52678756	0	-	52584742	52611714	789624	11	202,69,159,109,80,114,1816,126,203,117,53,	0,2408,8835,15384,16343,20390,23825,26387,26832,93263,93961,
#Partially deleted in new
chr15	52584904	52605177	chr15:52584904-52605177	0	-	52593723	52605177	789624	5	40,69,159,80,45,	0,2246,8673,16181,20228,
#Deleted in new
chr15	52584906	52587652	chr15:52584906-52587652	1	+	52584906	52584906	8553170	3	36,7,592,	0,1494,2154,
#Partially deleted in new
chr15	52586021	52608596	chr15:52586021-52608596	0	-	52586021	52586021	8553170	5	1198,159,80,114,29,	0,7556,15064,19111,22546,
#Partially deleted in new
chr15	52593416	52605191	chr15:52593416-52605191	0	-	52593416	52593416	8553170	4	320,109,80,59,	0,6710,7669,11716,
#Partially deleted in new
chr15	52611232	52678756	chr15:52611232-52678756	0	-	52611232	52678021	789624	5	23,203,185,117,53,	0,342,2440,66773,67471,
#Partially deleted in new
chr15	52611600	52679372	chr15:52611600-52679372	0	-	52611600	52678021	789624	4	177,185,117,97,	0,2072,66405,67675,
#Partially deleted in new
chr15	52611624	52709817	chr15:52611624-52709817	0	-	52611624	52678021	789624	4	153,185,117,92,	0,2048,66381,98101,
#Partially deleted in new
chr15	52611693	52679372	chr15:52611693-52679372	0	-	52611693	52678021	789624	4	84,185,117,545,	0,1979,66312,67134,
#Partially deleted in new
chr15	52611710	52678221	chr15:52611710-52678221	0	-	52611710	52678021	789624	3	67,185,216,	0,1962,66295,
#Deleted in new
chr15	52648633	52649866	chr15:52648633-52649866	3	-	52648633	52648633	8553170	2	158,382,	0,851,
#Partially deleted in new
chr15	52656052	52678560	chr15:52656052-52678560	1	-	52658720	52678021	789624	3	2745,117,131,	0,21953,22377,
#Partially deleted in new
chr15	52756988	52790012	chr15:52756988-52790012	3	-	52757554	52789884	789624	2	859,1233,	0,31791,
#Partially deleted in new
chr15	52757314	52791078	chr15:52757314-52791078	0	-	52757314	52757314	8553170	2	533,50,	0,33714,
#Partially deleted in new
chr15	52757439	52781183	chr15:52757439-52781183	1	-	52757673	52780622	789624	2	408,588,	0,23156,
#Deleted in new
chr15	52785724	52789396	chr15:52785724-52789396	0	-	52788485	52789396	789624	5	245,121,754,169,349,	0,1282,2036,3055,3323,
#Deleted in new
chr15	52801613	52804942	chr15:52801613-52804942	3	-	52801613	52801613	8553170	3	34,89,449,	0,2595,2880,
#Deleted in new
chr15	52885594	52886470	chr15:52885594-52886470	7	+	52885594	52885594	16724991	1	876,	0,
#Deleted in new
chr15	52937138	52938518	chr15:52937138-52938518	7	-	52937138	52937138	16724991	1	1380,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	53116364	53129698	chr15:53116364-53129698	3	+	53116364	53116364	789624	3	94,47,460,	0,1854,12874,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr15	53513740	53762878	chr15:53513740-53762878	3	-	53517698	53733149	789624	20	4014,105,196,80,92,818,197,196,221,246,148,97,146,120,77,175,79,107,165,228,	0,9477,83338,95772,99925,101685,151831,186009,188393,191247,192186,197116,197595,199031,200693,201452,202866,209061,219256,248910,
#Partially deleted in new
chr15	53515158	53759634	chr15:53515158-53759634	1	-	53517698	53733149	789624	20	2596,105,196,80,92,818,197,196,221,246,142,97,146,120,74,175,79,107,165,48,	0,8059,81920,94354,98507,100267,150413,184591,186975,189829,190768,195698,196177,197613,199275,200034,201448,207643,217838,244428,
#Partially deleted in new
chr15	53515162	53759662	chr15:53515162-53759662	1	-	53517698	53733149	789624	20	2592,105,196,80,92,818,197,196,221,246,148,97,146,120,77,175,79,107,165,30,	0,8055,81916,94350,98503,100263,150409,184587,186971,189825,190764,195694,196173,197609,199271,200030,201444,207639,217834,244470,
#Partially deleted in new
chr15	53517469	53733183	chr15:53517469-53733183	1	-	53517698	53733149	789624	19	285,105,196,80,92,818,197,196,221,246,142,97,182,120,77,175,79,107,187,	0,5748,79609,92043,96196,97956,148102,182280,184664,187518,188457,193387,193830,195302,196964,197723,199137,205332,215527,
#Partially deleted in new
chr15	53615880	53759384	chr15:53615880-53759384	0	-	53615880	53733149	789624	16	363,197,196,221,246,148,97,146,120,77,175,79,107,165,151,84,	0,49691,83869,86253,89107,90046,94976,95455,96891,98553,99312,100726,106921,117116,140786,143420,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	53651976	53652123	chr15:53651976-53652123	3	+	53651976	53651976	8553170	1	147,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	53665691	53684627	chr15:53665691-53684627	0	-	53665691	53665691	8553170	2	77,482,	0,18454,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	53764203	53764310	chr15:53764203-53764310	3	+	53764203	53764203	8553170	1	107,	0,
#Deleted in new
chr15	53837270	53837560	chr15:53837270-53837560	7	-	53837270	53837270	16724991	1	290,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	53910768	53914712	chr15:53910768-53914712	3	+	53910768	53910768	8553170	1	3944,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	53948145	53976908	chr15:53948145-53976908	3	-	53948145	53948145	8553170	6	463,63,149,115,122,141,	0,7623,19856,24524,26672,28622,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	53948205	53974968	chr15:53948205-53974968	0	-	53948205	53948205	8553170	4	403,63,115,151,	0,7563,24464,26612,
#Partially deleted in new
chr15	53978200	54628707	chr15:53978200-54628707	1	+	54012903	54627113	8553170	32	727,3239,23,65,79,72,220,228,142,170,116,164,157,69,90,129,134,86,127,97,144,78,78,89,150,124,57,81,148,93,160,1880,	0,34447,164817,165419,256829,259418,272024,285967,287154,315694,319610,322009,343738,353842,355566,360160,414847,436781,516407,521878,522634,528916,533552,547348,554716,568521,571434,577231,589599,644126,645594,648627,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr15	54012903	54633414	chr15:54012903-54633414	3	+	54012903	54627113	789624	32	2983,23,65,79,6,72,220,228,142,170,116,164,157,69,90,129,134,86,127,97,144,78,78,89,150,124,57,81,148,93,160,6587,	0,130114,130716,222126,223526,224715,237321,251264,252451,280991,284907,287306,309035,319139,320863,325457,380144,402078,481704,487175,487931,494213,498849,512645,520013,533818,536731,542528,554896,609423,610891,613924,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	54048587	54050876	chr15:54048587-54050876	7	-	54048587	54048587	16724991	1	2289,	0,
#Partially deleted in new
chr15	54264144	54417070	chr15:54264144-54417070	0	+	54264144	54264144	8553170	12	251,142,170,116,164,157,69,90,129,134,86,185,	0,1210,29750,33666,36065,57794,67898,69622,74216,128903,150837,152741,
#Deleted in new
chr15	54320730	54321565	chr15:54320730-54321565	7	-	54320730	54320730	16724991	1	835,	0,
#Partially deleted in new
chr15	54500970	54546823	chr15:54500970-54546823	0	+	54500970	54546823	789624	7	8,78,78,30,89,150,102,	0,6146,10782,11377,24578,31946,45751,
#Partially deleted in new
chr15	54609341	54627409	chr15:54609341-54627409	1	+	54623832	54627113	789624	4	103,93,160,582,	0,12985,14453,17486,
#Partially deleted in new
chr15	54611474	54623893	chr15:54611474-54623893	0	+	54623832	54623893	789624	3	170,93,99,	0,10852,12320,
#Partially deleted in new
chr15	55056746	55092173	chr15:55056746-55092173	3	+	55056746	55056746	789624	2	166,317,	0,35110,
#Partially deleted in new
chr15	55087998	55092173	chr15:55087998-55092173	0	+	55087998	55087998	8553170	2	35,317,	0,3858,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	55171377	55176739	chr15:55171377-55176739	3	-	55171377	55171377	8553170	1	5362,	0,
#Partially deleted in new
chr15	55180805	55197067	chr15:55180805-55197067	3	-	55182151	55196890	789624	6	1420,86,64,73,114,258,	0,2509,4556,10169,11914,16004,
#Partially deleted in new
chr15	55182044	55196914	chr15:55182044-55196914	0	-	55192662	55196890	789624	6	181,86,64,73,431,105,	0,1270,3317,8930,10358,14765,
#Partially deleted in new
chr15	55190974	55197049	chr15:55190974-55197049	0	-	55190974	55190974	8553170	3	73,114,82,	0,1745,5993,
#Partially deleted in new
chr15	55190992	55196625	chr15:55190992-55196625	0	-	55190992	55196382	789624	3	55,114,273,	0,1727,5360,
#Partially deleted in new
chr15	55192719	55196629	chr15:55192719-55196629	0	-	55192719	55192719	8553170	5	114,31,64,288,108,	0,1433,1576,2584,3802,
#Partially deleted in new
chr15	55192756	55196646	chr15:55192756-55196646	0	-	55192756	55192756	8553170	3	77,64,294,	0,1539,3596,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	55202965	55270394	chr15:55202965-55270394	1	-	55205506	55234934	789624	6	2740,124,104,86,175,230,	0,20923,25643,27435,31816,67199,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	55202968	55289815	chr15:55202968-55289815	3	-	55205506	55234934	789624	7	2737,124,104,86,175,120,100,	0,20920,25640,27432,31813,67196,86747,
#Partially deleted in new
chr15	55205348	55270286	chr15:55205348-55270286	1	-	55205506	55234934	789624	7	357,124,104,86,175,89,122,	0,18540,23260,25052,29433,33054,64816,
#Partially deleted in new
chr15	55205352	55270909	chr15:55205352-55270909	1	-	55205506	55234934	789624	7	353,124,104,86,175,120,51,	0,18536,23256,25048,29429,64812,65506,
#Partially deleted in new
chr15	55205615	55249035	chr15:55205615-55249035	0	-	55205615	55234934	789624	6	90,124,104,86,175,84,	0,18273,22993,24785,29166,43336,
#Partially deleted in new
chr15	55223915	55270874	chr15:55223915-55270874	0	-	55223915	55234934	789624	6	97,104,86,175,120,119,	0,4693,6485,10866,46249,46840,
#Partially deleted in new
chr15	55223947	55270901	chr15:55223947-55270901	0	-	55223947	55234934	789624	8	65,104,86,175,127,89,120,43,	0,4661,6453,10834,13368,14455,46217,46911,
#Partially deleted in new
chr15	55230424	55270256	chr15:55230424-55270256	0	-	55230424	55234934	789624	4	62,175,103,92,	0,4357,29496,39740,
#Partially deleted in new
chr15	55238117	55289813	chr15:55238117-55289813	0	-	55238117	55238117	8553170	3	374,120,98,	0,32047,51598,
#Partially deleted in new
chr15	55269793	55289791	chr15:55269793-55289791	0	-	55269793	55269793	8553170	2	491,76,	0,19922,
#Deleted in new
chr15	55288848	55289346	chr15:55288848-55289346	3	-	55288848	55288848	8553170	1	498,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	55289887	55319110	chr15:55289887-55319110	0	-	55289887	55289887	8553170	3	509,141,180,	0,24132,29043,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	55317183	55319045	chr15:55317183-55319045	3	-	55317627	55317792	789624	2	684,182,	0,1680,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	55317321	55319161	chr15:55317321-55319161	1	-	55317627	55317792	789624	2	546,255,	0,1585,
#Partially deleted in new
chr15	55317703	55319107	chr15:55317703-55319107	0	-	55317703	55317792	789624	2	164,207,	0,1197,
#Partially deleted in new
chr15	55318959	55355648	chr15:55318959-55355648	3	+	55319250	55355432	789624	12	454,136,118,105,131,141,52,212,65,214,181,363,	0,1315,2313,8571,10764,14907,20307,21652,22778,31739,35838,36326,
#Partially deleted in new
chr15	55318959	55355647	chr15:55318959-55355647	0	+	55319250	55333977	789624	9	454,131,141,52,212,65,214,181,362,	0,10764,14907,20307,21652,22778,31739,35838,36326,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	55319231	55320030	chr15:55319231-55320030	0	+	55319231	55319231	8553170	2	182,397,	0,402,
#Partially deleted in new
chr15	55319231	55339289	chr15:55319231-55339289	0	+	55319250	55327544	789624	5	182,105,131,141,23,	0,8299,10492,14635,20035,
#Partially deleted in new
chr15	55319244	55334007	chr15:55319244-55334007	0	+	55319250	55334007	789624	6	169,136,91,105,131,141,	0,1030,2055,8286,10479,14622,
#Partially deleted in new
chr15	55319250	55355432	chr15:55319250-55355432	1	+	55319250	55355432	789624	12	163,136,121,105,131,141,52,212,65,214,181,147,	0,1024,2019,8280,10473,14616,20016,21361,22487,31448,35547,36035,
#Partially deleted in new
chr15	55319272	55327635	chr15:55319272-55327635	0	+	55319272	55319272	8553170	5	141,136,118,55,105,	0,1002,2000,5507,8258,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	55340031	55359682	chr15:55340031-55359682	0	-	55340342	55359682	789624	3	421,98,144,	0,16280,19507,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	55340038	55348466	chr15:55340038-55348466	0	-	55340038	55340038	8553170	2	414,135,	0,8293,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	55340372	55350830	chr15:55340372-55350830	0	+	55340372	55340372	8553170	3	451,65,132,	0,1365,10326,
#Partially deleted in new
chr15	55340752	55355644	chr15:55340752-55355644	0	+	55340752	55354823	789624	5	71,65,105,181,359,	0,985,9946,14045,14533,
#Partially deleted in new
chr15	55343140	55343575	chr15:55343140-55343575	3	-	55343140	55343140	8553170	1	435,	0,
#Partially deleted in new
chr15	55346346	55346752	chr15:55346346-55346752	3	-	55346346	55346346	8553170	1	406,	0,
#Partially deleted in new
chr15	55349518	55355647	chr15:55349518-55355647	0	+	55349518	55349518	8553170	3	1394,181,362,	0,5279,5767,
#Deleted in new
chr15	55354584	55355644	chr15:55354584-55355644	0	+	55354584	55354584	8553170	2	394,359,	0,701,
#Partially deleted in new
chr15	55355238	55408259	chr15:55355238-55408259	1	-	55356219	55389424	789624	9	1171,1406,122,252,202,77,115,69,39,	0,4300,9949,16554,21710,23061,30361,34126,52982,
#Partially deleted in new
chr15	55355247	55498360	chr15:55355247-55498360	3	-	55355247	55355247	789624	16	1162,1406,122,252,202,77,115,69,106,154,110,146,232,134,148,154,	0,4291,9940,16545,21701,23052,30352,34117,77249,79657,84224,94974,111682,135875,142464,142959,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	55355249	55408510	chr15:55355249-55408510	3	-	55359498	55389424	789624	8	5695,122,252,202,77,115,69,290,	0,9938,16543,21699,23050,30350,34115,52971,
#Partially deleted in new
chr15	55355644	55408306	chr15:55355644-55408306	1	-	55356219	55389424	789624	10	765,152,105,122,252,202,77,115,69,86,	0,3894,5195,9543,16148,21304,22655,29955,33720,52576,
#Partially deleted in new
chr15	55355777	55365276	chr15:55355777-55365276	0	-	55356400	55365276	789624	2	632,89,	0,9410,
#Partially deleted in new
chr15	55356127	55360207	chr15:55356127-55360207	0	-	55356219	55360207	789624	2	282,420,	0,3660,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	55358838	55372952	chr15:55358838-55372952	0	-	55358838	55358838	8553170	3	2106,122,1160,	0,6349,12954,
#Partially deleted in new
chr15	55358838	55408279	chr15:55358838-55408279	0	-	55372025	55389424	789624	7	2106,238,202,77,115,69,59,	0,12954,18110,19461,26761,30526,49382,
#Partially deleted in new
chr15	55359017	55408052	chr15:55359017-55408052	1	-	55359498	55389424	789624	8	1927,122,252,202,77,115,69,206,	0,6170,12775,17931,19282,26582,30347,48829,
#Partially deleted in new
chr15	55371872	55408279	chr15:55371872-55408279	0	-	55371872	55389424	789624	7	172,96,202,77,115,69,59,	0,2282,5076,6427,13727,17492,36348,
#Partially deleted in new
chr15	55371986	55398268	chr15:55371986-55398268	0	-	55371986	55389424	789624	6	58,202,77,115,69,49,	0,4962,6313,13613,17378,26233,
#Deleted in new
chr15	55372939	55373034	chr15:55372939-55373034	3	-	55372939	55372939	5263520	1	95,	0,
#Partially deleted in new
chr15	55377023	55498341	chr15:55377023-55498341	0	-	55377023	55377023	8553170	10	127,77,115,69,110,146,232,134,148,135,	0,1276,8576,12341,62448,73198,89906,114099,120688,121183,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	55377126	55408371	chr15:55377126-55408371	0	-	55377126	55389424	789624	6	24,77,115,69,142,151,	0,1173,8473,12238,22658,31094,
#Partially deleted in new
chr15	55408547	55418712	chr15:55408547-55418712	3	+	55408768	55418570	789624	2	239,490,	0,9675,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	55410524	55498341	chr15:55410524-55498341	0	-	55450331	55498329	789624	9	319,47,106,154,110,146,134,148,135,	0,584,21972,24380,28947,39697,80598,87187,87682,
#Duplicated in new
chr15	55417697	55418764	chr15:55417697-55418764	0	+	55417697	55417697	8553170	2	62,542,	0,525,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	55417754	55498348	chr15:55417754-55498348	1	-	55418034	55498329	789624	8	379,154,110,146,232,134,148,142,	0,17150,21717,32467,49175,73368,79957,80452,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	55430307	55508234	chr15:55430307-55508234	3	-	55430669	55498329	789624	10	472,106,154,110,146,232,134,148,378,113,	0,2189,4597,9164,19914,36622,60815,67404,67899,77814,
#Partially deleted in new
chr15	55430307	55498601	chr15:55430307-55498601	1	-	55430669	55498329	789624	9	472,106,154,110,146,232,134,148,395,	0,2189,4597,9164,19914,36622,60815,67404,67899,
#Partially deleted in new
chr15	55430307	55498377	chr15:55430307-55498377	1	-	55430695	55498329	789624	8	472,154,110,146,232,134,148,171,	0,4597,9164,19914,36622,60815,67404,67899,
#Partially deleted in new
chr15	55442634	55443357	chr15:55442634-55443357	7	-	55442634	55442634	16724991	1	723,	0,
#Partially deleted in new
chr15	55466960	55498369	chr15:55466960-55498369	0	-	55497717	55498329	789624	5	201,134,75,99,163,	0,24162,28167,30751,31246,
#Partially deleted in new
chr15	55491018	55498344	chr15:55491018-55498344	0	-	55491018	55491018	8553170	3	238,148,138,	0,6693,7188,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	55538889	55588947	chr15:55538889-55588947	1	-	55546022	55588852	0	3	8258,86,144,	0,10020,49914,
#Partially deleted in new
chr15	55544408	55587961	chr15:55544408-55587961	3	-	55546022	55587883	0	4	817,1143,86,127,	0,1596,4501,43426,
#Partially deleted in new
chr15	55544686	55587940	chr15:55544686-55587940	1	-	55546022	55587883	0	3	2461,86,106,	0,4223,43148,
#Partially deleted in new
chr15	55588665	55589811	chr15:55588665-55589811	3	+	55588665	55588665	8553170	2	154,509,	0,637,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr15	55611545	55742979	chr15:55611545-55742979	3	-	55620011	55742931	789624	20	8721,105,166,121,183,171,128,187,96,189,306,165,248,160,159,138,134,145,303,142,	0,9117,12796,15462,17276,25624,27003,28096,29567,60899,61825,63973,66251,67740,68508,68945,70818,72241,128836,131292,
#Partially deleted in new
chr15	55655075	55675669	chr15:55655075-55675669	0	-	55656343	55675669	789624	4	1279,189,306,151,	0,17369,18295,20443,
#Partially deleted in new
chr15	55678012	55679830	chr15:55678012-55679830	0	-	55678012	55678012	8553170	2	32,545,	0,1273,
#Partially deleted in new
chr15	55680384	55681463	chr15:55680384-55681463	3	+	55680384	55680384	8553170	2	217,147,	0,932,
#Partially deleted in new
chr15	55738204	55738659	chr15:55738204-55738659	0	-	55738204	55738204	8553170	1	455,	0,
#Partially deleted in new
chr15	55738222	55743090	chr15:55738222-55743090	1	-	55738482	55742931	789624	3	277,303,253,	0,2159,4615,
#Partially deleted in new
chr15	55740477	55742534	chr15:55740477-55742534	0	-	55740477	55740544	789624	2	207,369,	0,1688,
#Partially deleted in new
chr15	55746638	55746767	chr15:55746638-55746767	7	+	55746638	55746638	16724991	1	129,	0,
#Partially deleted in new
chr15	55826921	55917131	chr15:55826921-55917131	1	-	55829896	55916831	0	22	3078,73,97,108,60,61,74,96,71,122,230,66,59,55,81,201,120,66,168,118,167,1848,	0,3592,6086,7116,7305,10867,11185,11587,13525,13684,15012,20047,21450,21599,21884,23620,25502,29209,33485,33739,35991,88362,
#Partially deleted in new
chr15	55826921	55993746	chr15:55826921-55993746	3	-	55829896	55993555	0	29	3078,73,97,108,60,61,74,96,71,122,230,66,59,55,81,201,120,66,168,118,167,103,62,51,54,39,79,74,236,	0,3592,6086,7116,7305,10867,11185,11587,13525,13684,15012,20047,21450,21599,21884,23620,25502,29209,33485,33739,35991,42657,45493,47036,97724,124454,124589,139551,166589,
#Partially deleted in new
chr15	55826921	55916469	chr15:55826921-55916469	0	-	55869663	55916469	789624	21	3078,73,97,108,74,96,71,122,230,66,59,55,81,201,120,66,168,118,167,103,1186,	0,3592,6086,7116,11185,11587,13525,13684,15012,20047,21450,21599,21884,23620,25502,29209,33485,33739,35991,42657,88362,
#Partially deleted in new
chr15	55826921	55917131	chr15:55826921-55917131	1	-	55829896	55916831	0	25	3078,73,97,108,60,61,74,96,71,122,230,66,59,55,81,201,120,66,168,118,167,103,62,51,1848,	0,3592,6086,7116,7305,10867,11185,11587,13525,13684,15012,20047,21450,21599,21884,23620,25502,29209,33485,33739,35991,42657,45493,47036,88362,
#Partially deleted in new
chr15	55826921	55915654	chr15:55826921-55915654	0	-	55829896	55915654	789624	24	3078,73,97,108,60,61,74,96,71,122,230,66,59,55,81,201,120,66,168,118,167,103,62,371,	0,3592,6086,7116,7305,10867,11185,11587,13525,13684,15012,20047,21450,21599,21884,23620,25502,29209,33485,33739,35991,42657,45493,88362,
#Partially deleted in new
chr15	55826996	55993660	chr15:55826996-55993660	0	-	55951391	55993555	8553170	29	3003,73,97,108,60,61,74,96,71,122,230,66,59,55,81,201,120,66,168,118,167,103,62,51,54,64,79,74,150,	0,3517,6011,7041,7230,10792,11110,11512,13450,13609,14937,19972,21375,21524,21809,23545,25427,29134,33410,33664,35916,42582,45418,46961,97649,124379,124514,139476,166514,
#Partially deleted in new
chr15	55827334	55917108	chr15:55827334-55917108	1	-	55829896	55916831	0	25	2665,73,97,108,60,61,74,96,71,122,230,66,59,55,81,201,120,66,168,118,119,103,62,51,1825,	0,3179,5673,6703,6892,10454,10772,11174,13112,13271,14599,19634,21037,21186,21471,23207,25089,28796,33072,33326,35578,42244,45080,46623,87949,
#Partially deleted in new
chr15	55860714	55993548	chr15:55860714-55993548	0	-	55951407	55993548	789624	9	64,167,103,62,51,54,39,74,38,	0,2198,8864,11700,13243,63931,90661,105758,132796,
#Partially deleted in new
chr15	55862982	55952745	chr15:55862982-55952745	0	-	55862982	55862982	8553170	8	97,103,62,51,54,39,79,92,	0,6596,9432,10975,61663,88393,88528,89671,
#Partially deleted in new
chr15	55862987	55951400	chr15:55862987-55951400	0	-	55905254	55951400	789624	7	92,103,62,51,70,54,25,	0,6591,9427,10970,42224,61658,88388,
#Partially deleted in new
chr15	55924362	55966546	chr15:55924362-55966546	0	-	55924362	55924362	8553170	5	337,62,39,79,74,	0,10330,27013,27148,42110,
#Deleted in new
chr15	56005714	56007176	chr15:56005714-56007176	7	-	56005714	56005714	16724991	1	1462,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	56029683	56029981	chr15:56029683-56029981	3	-	56029683	56029683	8553170	1	298,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	56071420	56071639	chr15:56071420-56071639	7	+	56071420	56071420	16724991	1	219,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	56087279	56144435	chr15:56087279-56144435	0	-	56087963	56142887	789624	9	230,83,2988,296,208,83,119,123,35,	0,628,6353,10801,14079,14889,16272,55498,57121,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	56087282	56243266	chr15:56087282-56243266	3	-	56093344	56142887	0	9	9338,296,208,83,119,123,83,34,142,	0,10798,14076,14886,16269,55495,57118,91987,155842,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	56103551	56189886	chr15:56103551-56189886	0	-	56103551	56142887	789624	7	119,123,83,32,75,34,52,	0,39226,40849,57164,75507,75718,86283,
#Deleted in new
chr15	56192352	56193262	chr15:56192352-56193262	7	-	56192352	56192352	16724991	1	910,	0,
#Partially deleted in new
chr15	56244008	56391385	chr15:56244008-56391385	0	+	56383993	56391385	789624	6	270,64,80,49,83,143,	0,129432,139943,144463,145309,147234,
#Deleted in new
chr15	56248786	56249127	chr15:56248786-56249127	3	+	56248786	56248786	8553170	1	341,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	56274529	56274636	chr15:56274529-56274636	3	-	56274529	56274529	8553170	1	107,	0,
#Deleted in new
chr15	56323192	56323719	chr15:56323192-56323719	7	+	56323192	56323192	16724991	1	527,	0,
#Partially deleted in new
chr15	56365426	56445874	chr15:56365426-56445874	3	+	56365450	56428444	789624	13	51,92,64,80,49,83,176,83,174,135,135,107,204,	0,152,8014,18525,23045,23891,25816,28738,29234,46875,62178,62940,80244,
#Partially deleted in new
chr15	56365437	56445997	chr15:56365437-56445997	1	+	56383993	56428444	789624	13	40,315,64,80,49,83,176,83,174,135,135,107,327,	0,141,8003,18514,23034,23880,25805,28727,29223,46864,62167,62929,80233,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	56365445	56396298	chr15:56365445-56396298	1	+	56365450	56394858	789624	9	32,92,64,80,49,83,176,83,1638,	0,133,7995,18506,23026,23872,25797,28719,29215,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	56365446	56398341	chr15:56365446-56398341	1	+	56383993	56394858	789624	8	224,64,80,49,83,176,83,3681,	0,7994,18505,23025,23871,25796,28718,29214,
#Partially deleted in new
chr15	56365446	56391418	chr15:56365446-56391418	0	+	56365450	56365690	789624	3	447,64,176,	0,7994,25796,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	56373437	56374623	chr15:56373437-56374623	0	+	56373437	56373437	8553170	2	67,470,	0,716,
#Deleted in new
chr15	56393653	56394698	chr15:56393653-56394698	0	+	56393653	56393653	8553170	2	594,38,	0,1007,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	56394320	56396785	chr15:56394320-56396785	3	-	56394320	56394320	8553170	1	2465,	0,
#Partially deleted in new
chr15	56394720	56430122	chr15:56394720-56430122	1	+	56394738	56428444	789624	3	114,135,1756,	0,17581,33646,
#Partially deleted in new
chr15	56408482	56410186	chr15:56408482-56410186	3	-	56408482	56408482	8553170	2	448,391,	0,1313,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	56421543	56434207	chr15:56421543-56434207	0	-	56421543	56421543	8553170	4	235,108,126,70,	0,7542,9829,12594,
#Partially deleted in new
chr15	56428730	56465137	chr15:56428730-56465137	3	-	56429100	56464972	789624	10	463,126,258,108,217,230,103,128,222,168,	0,2642,5407,14699,14907,15713,18110,27663,35295,36239,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	56447119	56447697	chr15:56447119-56447697	3	+	56447119	56447119	8553170	1	578,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	56463779	56465085	chr15:56463779-56465085	0	-	56463779	56463779	8553170	2	468,116,	0,1190,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	56542951	56629592	chr15:56542951-56629592	3	-	56542951	56542951	8553170	10	145,254,148,155,354,133,32,108,88,78,	0,607,4908,5495,6205,49768,60888,62424,85852,86563,
#Partially deleted in new
chr15	56547937	56629565	chr15:56547937-56629565	1	-	56547937	56547937	8553170	5	70,354,88,15,51,	0,1219,80866,81448,81577,
#Partially deleted in new
chr15	56630180	56682416	chr15:56630180-56682416	0	-	56654745	56682369	789624	14	1942,56,46,37,119,112,63,141,308,135,147,101,158,163,	0,5014,12771,24017,24204,24550,28243,36214,36498,38642,46489,47393,48483,52073,
#Partially deleted in new
chr15	56630180	56734086	chr15:56630180-56734086	1	-	56631497	56704256	789624	21	1942,56,46,37,119,63,141,308,135,147,101,158,224,110,171,118,140,66,147,44,629,	0,5014,12771,24017,24204,28243,36214,36498,38642,46489,47393,48483,52073,58860,59119,62917,70752,70992,73940,77082,103277,
#Partially deleted in new
chr15	56630326	56733589	chr15:56630326-56733589	3	-	56631497	56707109	789624	22	1796,56,46,37,119,63,141,308,135,147,101,158,224,110,171,118,140,66,147,69,44,132,	0,4868,12625,23871,24058,28097,36068,36352,38496,46343,47247,48337,51927,58714,58973,62771,70606,70846,73794,76755,76936,103131,
#Partially deleted in new
chr15	56631297	56635778	chr15:56631297-56635778	0	-	56631297	56631297	8553170	2	825,584,	0,3897,
#Partially deleted in new
chr15	56631842	56645339	chr15:56631842-56645339	0	-	56631842	56631842	8553170	4	280,56,46,205,	0,3352,11109,13292,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	56634037	56634167	chr15:56634037-56634167	3	-	56634037	56634037	8553170	1	130,	0,
#Partially deleted in new
chr15	56635174	56643144	chr15:56635174-56643144	0	-	56635174	56635174	8553170	2	76,193,	0,7777,
#Partially deleted in new
chr15	56652489	56707318	chr15:56652489-56707318	0	-	56666488	56707109	789624	17	2014,63,141,187,135,147,101,158,224,110,171,118,140,66,147,62,56,	0,5934,13905,14310,16333,24180,25084,26174,29764,36551,36810,40608,48443,48683,51631,54592,54773,
#Partially deleted in new
chr15	56666494	56733507	chr15:56666494-56733507	0	-	56668178	56707109	789624	17	41,308,245,135,147,101,158,224,110,171,118,140,66,147,69,44,50,	0,184,1502,2328,10175,11079,12169,15759,22546,22805,26603,34438,34678,37626,40587,40768,66963,
#Partially deleted in new
chr15	56666511	56678821	chr15:56666511-56678821	0	-	56666511	56666511	8553170	5	475,135,147,101,158,	0,2311,10158,11062,12152,
#Partially deleted in new
chr15	56688788	56693206	chr15:56688788-56693206	0	-	56688788	56688788	8553170	3	362,171,109,	0,511,4309,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	56697762	56733494	chr15:56697762-56733494	1	-	56700836	56707109	789624	6	3310,66,147,62,44,37,	0,3410,6358,9319,9500,35695,
#Partially deleted in new
chr15	56701172	56733530	chr15:56701172-56733530	0	-	56701172	56707109	789624	6	66,147,69,44,29,73,	0,2948,5909,6090,28581,32285,
#Deleted in new
chr15	56729931	56730611	chr15:56729931-56730611	3	-	56729931	56729931	8553170	1	680,	0,
#Deleted in new
chr15	56732603	56733577	chr15:56732603-56733577	0	-	56732603	56732603	8553170	2	421,120,	0,854,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	56795381	56795522	chr15:56795381-56795522	3	+	56795381	56795381	8553170	1	141,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	56795459	56918385	chr15:56795459-56918385	0	-	56795459	56795459	8553170	8	603,128,158,231,154,118,148,846,	0,32064,51864,54496,94554,110288,121605,122080,
#Deleted in new
chr15	56846339	56846605	chr15:56846339-56846605	7	+	56846339	56846339	16724991	1	266,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	56859667	56917648	chr15:56859667-56917648	0	-	56859667	56859667	8553170	4	1873,154,148,109,	0,30346,57397,57872,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	56886169	56918499	chr15:56886169-56918499	3	-	56886169	56886169	789624	4	1755,154,148,960,	0,3844,30895,31370,
#Deleted in new
chr15	56887106	56888219	chr15:56887106-56888219	3	+	56887106	56887106	8553170	2	64,532,	0,581,
#Deleted in new
chr15	56908311	56908635	chr15:56908311-56908635	3	-	56908311	56908311	8553170	1	324,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	56916725	56918493	chr15:56916725-56918493	0	-	56916725	56916725	8553170	2	487,954,	0,814,
#Partially deleted in new
chr15	56918622	57288514	chr15:56918622-57288514	3	+	56919913	57282587	0	21	284,87,73,74,103,65,136,53,106,140,145,65,79,74,72,207,115,163,233,154,2358,	0,1279,2403,145127,173166,247779,273535,279150,312529,313668,314089,315420,324849,332727,333798,334639,343471,344489,354407,363822,367534,
#Partially deleted in new
chr15	56918624	57289853	chr15:56918624-57289853	1	+	56919913	57282587	0	20	282,97,73,74,103,65,136,53,106,140,145,65,79,74,207,115,163,233,154,3697,	0,1267,2401,145125,173164,247777,273533,279148,312527,313666,314087,315418,324847,332725,334637,343469,344487,354405,363820,367532,
#Partially deleted in new
chr15	56918674	57091829	chr15:56918674-57091829	0	+	56918674	56918674	8553170	6	232,97,73,36,74,41,	0,1217,2351,82674,145075,173114,
#Partially deleted in new
chr15	56918674	57282476	chr15:56918674-57282476	0	+	56919913	57282476	789624	20	232,97,73,62,103,65,136,53,106,140,145,65,79,74,72,207,115,163,233,32,	0,1217,2351,153978,173114,247727,273483,279098,312477,313616,314037,315368,324797,332675,333746,334587,343419,344437,354355,363770,
#Partially deleted in new
chr15	56918674	57286550	chr15:56918674-57286550	0	+	56918674	56918674	8553170	6	232,97,73,233,154,394,	0,1217,2351,354355,363770,367482,
#Partially deleted in new
chr15	56918693	57288508	chr15:56918693-57288508	1	+	56919913	57282587	0	21	213,97,73,74,103,65,136,53,106,140,145,65,79,74,72,207,115,163,233,154,2352,	0,1198,2332,145056,173095,247708,273464,279079,312458,313597,314018,315349,324778,332656,333727,334568,343400,344418,354336,363751,367463,
#Partially deleted in new
chr15	56918831	57288085	chr15:56918831-57288085	1	+	56919913	57282587	0	20	75,87,73,74,103,65,136,53,106,140,145,65,79,74,207,115,163,233,154,1929,	0,1070,2194,144918,172957,247570,273326,278941,312320,313459,313880,315211,324640,332518,334430,343262,344280,354198,363613,367325,
#Partially deleted in new
chr15	56919147	57192239	chr15:56919147-57192239	0	+	56919913	57192239	789624	7	81,97,73,74,103,65,82,	0,744,1878,144602,172641,247254,273010,
#Partially deleted in new
chr15	56919516	57166428	chr15:56919516-57166428	0	+	56919913	57091817	789624	4	472,73,103,27,	0,1509,172272,246885,
#Partially deleted in new
chr15	57063747	57092023	chr15:57063747-57092023	0	+	57063747	57063747	8553170	2	76,235,	0,28041,
#Partially deleted in new
chr15	57109257	57243553	chr15:57109257-57243553	0	+	57109257	57109257	8553170	9	60,65,136,53,106,140,145,65,82,	0,57144,82900,88515,121894,123033,123454,124785,134214,
#Partially deleted in new
chr15	57118349	57192293	chr15:57118349-57192293	0	+	57118349	57118349	8553170	4	84,190,65,136,	0,11433,48052,73808,
#Partially deleted in new
chr15	57134315	57231252	chr15:57134315-57231252	0	+	57134315	57134315	8553170	5	185,65,136,53,101,	0,32086,57842,63457,96836,
#Partially deleted in new
chr15	57214078	57243515	chr15:57214078-57243515	0	+	57214078	57214078	8553170	6	318,106,140,145,65,44,	0,17073,18212,18633,19964,29393,
#Partially deleted in new
chr15	57219036	57253468	chr15:57219036-57253468	0	+	57219036	57219036	8553170	7	554,106,145,65,79,74,207,	0,12115,13675,15006,24435,32313,34225,
#Partially deleted in new
chr15	57219429	57286251	chr15:57219429-57286251	1	+	57219521	57282587	789624	14	161,106,140,145,65,79,74,72,207,115,163,233,154,95,	0,11722,12861,13282,14613,24042,31920,32991,33832,42664,43682,53600,63015,66727,
#Partially deleted in new
chr15	57219434	57286257	chr15:57219434-57286257	1	+	57219579	57282587	0	12	156,106,145,65,79,74,207,115,163,233,154,101,	0,11717,13277,14608,24037,31915,33827,42659,43677,53595,63010,66722,
#Partially deleted in new
chr15	57219465	57288506	chr15:57219465-57288506	1	+	57219521	57282587	0	13	125,106,140,145,65,79,74,207,115,163,233,154,2350,	0,11686,12825,13246,14577,24006,31884,33796,42628,43646,53564,62979,66691,
#Deleted in new
chr15	57246959	57247893	chr15:57246959-57247893	7	-	57246959	57246959	16724991	1	934,	0,
#Partially deleted in new
chr15	57248015	57286458	chr15:57248015-57286458	1	+	57248065	57282587	789624	8	66,74,207,115,163,233,154,302,	0,3334,5246,14078,15096,25014,34429,38141,
#Partially deleted in new
chr15	57248015	57263224	chr15:57248015-57263224	0	+	57248015	57248015	8553170	5	66,74,207,115,113,	0,3334,5246,14078,15096,
#Partially deleted in new
chr15	57248040	57286644	chr15:57248040-57286644	1	+	57248065	57282587	789624	9	41,74,72,207,115,163,230,154,488,	0,3309,4380,5221,14053,15071,24992,34404,38116,
#Partially deleted in new
chr15	57248041	57273198	chr15:57248041-57273198	0	+	57248041	57248041	8553170	7	40,74,72,207,115,163,166,	0,3308,4379,5220,14052,15070,24991,
#Partially deleted in new
chr15	57251168	57262198	chr15:57251168-57262198	0	+	57251168	57251168	8553170	4	255,72,207,105,	0,1252,2093,10925,
#Partially deleted in new
chr15	57252198	57273164	chr15:57252198-57273164	0	+	57252198	57252198	8553170	5	294,207,115,163,135,	0,1063,9895,10913,20831,
#Partially deleted in new
chr15	57282182	57286945	chr15:57282182-57286945	0	+	57282182	57282182	8553170	2	416,789,	0,3974,
#Partially deleted in new
chr15	57282442	57299281	chr15:57282442-57299281	0	+	57282442	57282587	789624	2	156,56,	0,16783,
#Partially deleted in new
chr15	57282454	57291124	chr15:57282454-57291124	0	+	57282454	57282587	789624	2	144,296,	0,8374,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	57300364	57307761	chr15:57300364-57307761	3	+	57300364	57300364	789624	3	560,1750,220,	0,4954,7177,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	57300364	57301502	chr15:57300364-57301502	0	+	57300364	57300364	8553170	2	560,64,	0,1074,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	57304724	57307758	chr15:57304724-57307758	1	+	57304724	57304724	8553170	3	1898,26,217,	0,2318,2817,
#Deleted in new
chr15	57306299	57307769	chr15:57306299-57307769	0	+	57306299	57306299	8553170	1	1470,	0,
#Partially deleted in new
chr15	57319137	57323908	chr15:57319137-57323908	3	+	57319137	57319137	789624	4	319,167,223,63,	0,1655,3767,4708,
#Duplicated in new
chr15	57325471	57326447	chr15:57325471-57326447	7	-	57325471	57325471	16724991	2	271,250,	0,726,
#Partially deleted in new
chr15	57375966	57438017	chr15:57375966-57438017	0	+	57375966	57375966	8553170	3	304,240,33,	0,959,62018,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr15	57376504	57550727	chr15:57376504-57550727	3	+	57437999	57547490	789624	19	63,1617,95,106,102,149,136,213,207,105,153,171,162,90,84,125,109,164,3373,	0,61480,63872,65868,74995,75636,77178,85175,140275,141888,146984,148076,152149,155185,167191,167968,169087,169571,170850,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	57377145	57407282	chr15:57377145-57407282	0	+	57377145	57377145	8553170	8	20,139,183,90,20,54,99,310,	0,16807,19778,21195,24873,25515,28820,29827,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	57405073	57405175	chr15:57405073-57405175	3	-	57405073	57405073	8553170	1	102,	0,
#Deleted in new
chr15	57477483	57478329	chr15:57477483-57478329	3	-	57477483	57477483	8553170	2	131,124,	0,722,
#Partially deleted in new
chr15	57527186	57529009	chr15:57527186-57529009	3	-	57527186	57527186	8553170	2	503,297,	0,1526,
#Deleted in new
chr15	57553954	57555680	chr15:57553954-57555680	3	+	57553954	57553954	8553170	1	1726,	0,
#Deleted in new
chr15	57555950	57556379	chr15:57555950-57556379	7	-	57555950	57555950	16724991	1	429,	0,
#Partially deleted in new
chr15	57591907	57714745	chr15:57591907-57714745	1	+	57592034	57714679	789624	14	202,87,156,93,114,153,126,129,80,106,84,101,205,210,	0,12361,26125,29700,33871,37794,40526,41705,45787,47532,69542,83060,120076,122628,
#Partially deleted in new
chr15	57591940	57685364	chr15:57591940-57685364	3	+	57592034	57684498	0	13	169,87,156,93,114,153,126,129,80,106,84,101,963,	0,12328,26092,29667,33838,37761,40493,41672,45754,47499,69509,83027,92461,
#Partially deleted in new
chr15	57592013	57714689	chr15:57592013-57714689	3	+	57592034	57714679	789624	15	96,87,156,93,114,153,126,129,80,106,84,101,645,205,154,	0,12255,26019,29594,33765,37688,40420,41599,45681,47426,69436,82954,116700,119970,122522,
#Partially deleted in new
chr15	57592032	57685360	chr15:57592032-57685360	1	+	57592034	57684498	0	12	77,87,156,93,114,153,126,129,80,106,101,959,	0,12236,26000,29575,33746,37669,40401,41580,45662,47407,82935,92369,
#Partially deleted in new
chr15	57592032	57714745	chr15:57592032-57714745	1	+	57592034	57714569	789624	13	77,87,156,93,114,153,126,129,80,106,84,101,210,	0,12236,26000,29575,33746,37669,40401,41580,45662,47407,69417,82935,122503,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr15	57592032	57714745	chr15:57592032-57714745	0	+	57592034	57684498	789624	17	77,87,156,93,114,153,126,129,80,106,101,273,162,439,645,205,210,	0,12236,26000,29575,33746,37669,40401,41580,45662,47407,82935,92369,109520,113901,116681,119951,122503,
#Partially deleted in new
chr15	57592032	57714745	chr15:57592032-57714745	0	+	57592034	57691940	789624	14	77,87,156,93,114,153,126,129,80,106,84,74,205,210,	0,12236,26000,29575,33746,37669,40401,41580,45662,47407,69417,99866,119951,122503,
#Partially deleted in new
chr15	57592032	57706955	chr15:57592032-57706955	0	+	57592034	57684498	8553170	13	77,87,156,114,153,126,129,80,106,84,101,273,1022,	0,12236,26000,33746,37669,40401,41580,45662,47407,69417,82935,92369,113901,
#Partially deleted in new
chr15	57592032	57706955	chr15:57592032-57706955	0	+	57592034	57684498	8553170	13	77,87,156,153,126,129,80,106,84,101,273,439,464,	0,12236,26000,37669,40401,41580,45662,47407,69417,82935,92369,113901,114459,
#Partially deleted in new
chr15	57592032	57714745	chr15:57592032-57714745	0	+	57592034	57712004	789624	12	77,87,156,93,114,153,126,129,80,106,205,210,	0,12236,26000,29575,33746,37669,40401,41580,45662,47407,119951,122503,
#Partially deleted in new
chr15	57592032	57714745	chr15:57592032-57714745	0	+	57592034	57712004	789624	13	77,87,156,93,114,153,126,129,80,106,84,205,210,	0,12236,26000,29575,33746,37669,40401,41580,45662,47407,69417,119951,122503,
#Partially deleted in new
chr15	57592032	57706955	chr15:57592032-57706955	0	+	57592034	57684498	789624	14	77,87,156,93,114,153,126,129,80,106,84,101,273,1022,	0,12236,26000,29575,33746,37669,40401,41580,45662,47407,69417,82935,92369,113901,
#Partially deleted in new
chr15	57592032	57706955	chr15:57592032-57706955	0	+	57592034	57706054	8553170	12	77,87,156,114,153,126,129,80,106,101,439,464,	0,12236,26000,33746,37669,40401,41580,45662,47407,82935,113901,114459,
#Partially deleted in new
chr15	57592032	57714745	chr15:57592032-57714745	0	+	57592034	57646190	789624	16	77,87,156,93,114,153,126,129,80,106,533,84,273,74,205,210,	0,12236,26000,29575,33746,37669,40401,41580,45662,47407,54104,69417,92369,99866,119951,122503,
#Partially deleted in new
chr15	57592032	57650062	chr15:57592032-57650062	1	+	57592034	57646190	8553170	11	77,87,156,93,114,153,126,129,80,106,3926,	0,12236,26000,29575,33746,37669,40401,41580,45662,47407,54104,
#Partially deleted in new
chr15	57599410	57625809	chr15:57599410-57625809	0	+	57599673	57625809	789624	6	115,85,87,156,93,31,	0,208,4858,18622,22197,26368,
#Partially deleted in new
chr15	57633663	57684791	chr15:57633663-57684791	0	+	57633663	57684422	789624	5	78,80,106,84,390,	0,4031,5776,27786,50738,
#Partially deleted in new
chr15	57680697	57714745	chr15:57680697-57714745	0	+	57680697	57680697	8553170	5	93,273,174,205,210,	0,3704,28487,31286,33838,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	57690363	57692698	chr15:57690363-57692698	0	+	57690363	57690363	8553170	1	2335,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	57706628	57717557	chr15:57706628-57717557	3	+	57706842	57714679	789624	4	327,645,205,3022,	0,2085,5355,7907,
#Partially deleted in new
chr15	57706694	57714882	chr15:57706694-57714882	0	+	57706842	57706959	789624	4	451,645,205,347,	0,2019,5289,7841,
#Partially deleted in new
chr15	57706702	57709184	chr15:57706702-57709184	0	+	57706842	57706959	789624	2	439,471,	0,2011,
#Partially deleted in new
chr15	57706711	57782762	chr15:57706711-57782762	0	+	57706842	57735595	789624	7	244,645,205,188,276,151,1187,	0,2002,5272,28755,44459,70883,74864,
#Partially deleted in new
chr15	57706713	57708962	chr15:57706713-57708962	0	+	57706713	57706713	8553170	3	242,100,249,	0,753,2000,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	57706724	57717554	chr15:57706724-57717554	1	+	57706842	57714679	789624	4	231,174,205,3019,	0,2460,5259,7811,
#Partially deleted in new
chr15	57706727	57708746	chr15:57706727-57708746	1	+	57706727	57708746	789624	2	228,33,	0,1986,
#Partially deleted in new
chr15	57707087	57709333	chr15:57707087-57709333	0	+	57707087	57707087	8553170	2	123,620,	0,1626,
#Deleted in new
chr15	57720294	57720928	chr15:57720294-57720928	3	+	57720294	57720294	8553170	1	634,	0,
#Partially deleted in new
chr15	57746106	57751474	chr15:57746106-57751474	0	+	57746106	57746106	8553170	3	113,77,304,	0,793,5064,
#Partially deleted in new
chr15	57953423	58066418	chr15:57953423-58066418	3	-	57955196	58065650	0	13	1846,75,158,165,185,103,114,129,62,130,141,105,885,	0,7346,7713,8588,10461,12301,39281,39521,41654,57225,60434,60753,112110,
#Partially deleted in new
chr15	57953423	58065923	chr15:57953423-58065923	1	-	57955196	58058065	0	14	1846,75,158,165,185,103,114,129,62,130,141,105,97,390,	0,7346,7713,8588,10461,12301,39281,39521,41654,57225,60434,60753,104588,112110,
#Deleted in new
chr15	57953424	57955269	chr15:57953424-57955269	0	-	57955196	57955269	789624	2	224,242,	0,1603,
#Partially deleted in new
chr15	57953428	57964791	chr15:57953428-57964791	0	-	57953428	57953428	8553170	5	1841,75,158,165,907,	0,7341,7708,8583,10456,
#Partially deleted in new
chr15	57953430	58065738	chr15:57953430-58065738	1	-	57955196	58065650	0	12	1839,75,158,165,185,103,129,62,130,141,105,205,	0,7339,7706,8581,10454,12294,39514,41647,57218,60427,60746,112103,
#Partially deleted in new
chr15	57953819	58065668	chr15:57953819-58065668	0	-	58058102	58065650	789624	14	1450,75,158,165,185,103,114,129,62,130,141,105,97,135,	0,6950,7317,8192,10065,11905,38885,39125,41258,56829,60038,60357,104192,111714,
#Partially deleted in new
chr15	57955062	58279263	chr15:57955062-58279263	1	-	57955196	58279203	789624	13	207,75,158,165,185,103,114,129,62,130,141,105,90,	0,5707,6074,6949,8822,10662,37642,37882,40015,55586,58795,59114,324111,
#Partially deleted in new
chr15	57955166	58014101	chr15:57955166-58014101	1	-	57955196	58013932	0	11	103,75,158,165,185,103,114,129,62,130,244,	0,5603,5970,6845,8718,10558,37538,37778,39911,55482,58691,
#Partially deleted in new
chr15	57979715	57980646	chr15:57979715-57980646	7	-	57979715	57979715	16724991	1	931,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	57990216	57990636	chr15:57990216-57990636	3	-	57990216	57990216	8553170	1	420,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	57991423	57995139	chr15:57991423-57995139	0	-	57991423	57991423	8553170	4	170,114,129,62,	0,1281,1521,3654,
#Partially deleted in new
chr15	57992782	58038582	chr15:57992782-58038582	0	-	57992782	57992782	8553170	6	36,129,62,141,105,72,	0,162,2295,21075,21394,45728,
#Partially deleted in new
chr15	57995089	58036723	chr15:57995089-58036723	0	-	57995089	58013932	789624	5	50,130,137,105,132,	0,15559,18768,19087,41502,
#Partially deleted in new
chr15	58012088	58065711	chr15:58012088-58065711	0	-	58012088	58012088	8553170	4	60,141,105,178,	0,1769,2088,53445,
#Partially deleted in new
chr15	58013857	58473913	chr15:58013857-58473913	0	-	58013857	58013932	789624	4	141,105,135,283,	0,319,406113,459773,
#Partially deleted in new
chr15	58013905	58138825	chr15:58013905-58138825	0	-	58013905	58013932	789624	3	93,105,379,	0,271,124541,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	58013937	58279270	chr15:58013937-58279270	0	-	58013937	58013937	8553170	5	61,105,150,168,97,	0,239,93381,232197,265236,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	58013985	58279321	chr15:58013985-58279321	0	-	58013985	58013985	8553170	5	13,105,150,126,148,	0,191,93333,124461,265188,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	58014260	58279280	chr15:58014260-58279280	0	-	58014260	58014260	8553170	5	21,150,126,158,107,	0,93058,124186,211353,264913,
#Partially deleted in new
chr15	58065224	58071043	chr15:58065224-58071043	3	+	58065224	58065224	8553170	3	518,120,236,	0,1590,5583,
#Partially deleted in new
chr15	58107416	58497866	chr15:58107416-58497866	0	-	58107416	58107416	8553170	5	52,126,135,130,150,	0,31030,312554,366214,390300,
#Partially deleted in new
chr15	58138168	58184579	chr15:58138168-58184579	1	+	58166756	58184135	789624	6	113,127,138,119,218,619,	0,28504,34899,36749,40959,45792,
#Partially deleted in new
chr15	58138195	58185911	chr15:58138195-58185911	3	+	58138565	58184135	789624	6	481,127,138,119,218,1951,	0,28477,34872,36722,40932,45765,
#Partially deleted in new
chr15	58138262	58146895	chr15:58138262-58146895	0	+	58138262	58138262	8553170	2	414,174,	0,8459,
#Partially deleted in new
chr15	58138380	58185911	chr15:58138380-58185911	1	+	58138565	58184135	789624	7	296,127,138,119,218,480,1425,	0,28292,34687,36537,40747,45580,46106,
#Partially deleted in new
chr15	58138446	58279227	chr15:58138446-58279227	0	-	58138446	58138446	8553170	4	126,193,149,54,	0,25505,28201,140727,
#Deleted in new
chr15	58150274	58150563	chr15:58150274-58150563	7	+	58150274	58150274	16724991	1	289,	0,
#Deleted in new
chr15	58150634	58150962	chr15:58150634-58150962	7	+	58150634	58150634	16724991	1	328,	0,
#Deleted in new
chr15	58151032	58152513	chr15:58151032-58152513	7	+	58151032	58151032	16724991	1	1481,	0,
#Deleted in new
chr15	58152605	58154407	chr15:58152605-58154407	7	+	58152605	58152605	16724991	1	1802,	0,
#Deleted in new
chr15	58154959	58156061	chr15:58154959-58156061	7	+	58154959	58154959	16724991	1	1102,	0,
#Deleted in new
chr15	58200605	58201018	chr15:58200605-58201018	7	+	58200605	58200605	16724991	1	413,	0,
#Partially deleted in new
chr15	58214053	58279321	chr15:58214053-58279321	0	-	58214053	58214053	8553170	4	257,158,168,148,	0,11560,32081,65120,
#Partially deleted in new
chr15	58241899	58246265	chr15:58241899-58246265	0	-	58241899	58241899	8553170	2	96,131,	0,4235,
#Partially deleted in new
chr15	58246182	58331630	chr15:58246182-58331630	0	-	58246182	58246182	8553170	2	120,452,	0,84996,
#Partially deleted in new
chr15	58257447	58331464	chr15:58257447-58331464	0	-	58257447	58257447	8553170	2	108,286,	0,73731,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	58410568	58568873	chr15:58410568-58568873	3	+	58432032	58568827	789624	11	250,325,128,185,183,118,234,243,118,219,158,	0,20258,21424,127764,131216,131965,135173,137761,150295,152936,158147,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	58410571	58566471	chr15:58410571-58566471	1	+	58432032	58565290	789624	10	247,128,185,183,118,234,243,118,219,1293,	0,21421,127761,131213,131962,135170,137758,150292,152933,154607,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	58410580	58432363	chr15:58410580-58432363	0	+	58410580	58410580	8553170	3	238,325,371,	0,20246,21412,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	58431797	58569843	chr15:58431797-58569843	1	+	58432032	58568827	789624	9	323,185,183,118,234,243,118,219,1128,	0,106535,109987,110736,113944,116532,129066,131707,136918,
#Partially deleted in new
chr15	58431990	58568952	chr15:58431990-58568952	1	+	58432032	58568827	789624	8	130,185,118,234,243,118,219,237,	0,106342,110543,113751,116339,128873,131514,136725,
#Partially deleted in new
chr15	58431990	58564008	chr15:58431990-58564008	0	+	58431990	58431990	8553170	7	130,183,118,234,243,118,504,	0,109794,110543,113751,116339,128873,131514,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	58434889	58498735	chr15:58434889-58498735	3	-	58434889	58434889	789624	3	2023,111,97,	0,59883,63749,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	58454326	58454982	chr15:58454326-58454982	3	+	58454326	58454326	8553170	1	656,	0,
#Deleted in new
chr15	58456187	58456348	chr15:58456187-58456348	3	+	58456187	58456187	8553170	1	161,	0,
#Deleted in new
chr15	58521310	58523371	chr15:58521310-58523371	3	+	58521310	58521310	8553170	2	336,1421,	0,640,
#Partially deleted in new
chr15	58541747	58548572	chr15:58541747-58548572	0	+	58541747	58541747	8553170	4	220,118,234,243,	0,786,3994,6582,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	58587506	58591676	chr15:58587506-58591676	3	+	58587506	58587506	8553170	2	406,136,	0,4034,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr15	58588806	58749978	chr15:58588806-58749978	3	-	58597546	58749534	0	16	8835,127,221,109,184,151,184,164,184,93,150,101,159,119,151,499,	0,10791,21490,22192,23001,32664,38893,44389,51970,55079,57248,76290,90317,93389,128770,160673,
#Partially deleted in new
chr15	58596871	58749594	chr15:58596871-58749594	1	-	58597456	58749534	789624	4	647,45,54,115,	0,36443,43905,152608,
#Partially deleted in new
chr15	58597163	58749707	chr15:58597163-58749707	1	-	58597456	58749534	789624	2	355,228,	0,152316,
#Partially deleted in new
chr15	58597164	58621504	chr15:58597164-58621504	0	-	58597164	58597164	8553170	4	477,127,1695,34,	0,2433,13132,24306,
#Partially deleted in new
chr15	58597201	58679282	chr15:58597201-58679282	0	-	58676276	58679282	789624	14	440,127,221,109,184,151,184,164,184,93,150,101,151,159,	0,2396,13095,13797,14606,24269,30498,35994,43575,46684,48853,67895,78941,81922,
#Partially deleted in new
chr15	58609157	58621510	chr15:58609157-58621510	0	-	58609157	58609157	8553170	4	1360,109,184,40,	0,1841,2650,12313,
#Partially deleted in new
chr15	58610926	58621541	chr15:58610926-58621541	0	-	58610926	58610926	8553170	3	181,184,71,	0,881,10544,
#Partially deleted in new
chr15	58611275	58621504	chr15:58611275-58621504	0	-	58611275	58611275	8553170	2	716,34,	0,10195,
#Partially deleted in new
chr15	58611853	58629464	chr15:58611853-58629464	0	-	58611853	58611853	8553170	4	138,151,184,201,	0,9617,15846,17410,
#Partially deleted in new
chr15	58627711	58749630	chr15:58627711-58749630	0	-	58627711	58749534	789624	4	172,164,54,151,	0,5484,13065,121768,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	58655242	58749770	chr15:58655242-58749770	0	-	58655242	58655242	8553170	6	174,101,159,119,151,291,	0,9854,23881,26953,62334,94237,
#Partially deleted in new
chr15	58665145	58749758	chr15:58665145-58749758	0	-	58665145	58749534	789624	4	52,119,151,279,	0,17050,52431,84334,
#Partially deleted in new
chr15	58665151	58748966	chr15:58665151-58748966	0	-	58665151	58665151	8553170	5	46,159,119,151,172,	0,13972,17044,52425,83643,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	58665181	58749774	chr15:58665181-58749774	0	-	58665181	58749534	789624	4	16,125,151,295,	0,33098,52395,84298,
#Deleted in new
chr15	58672295	58672933	chr15:58672295-58672933	7	+	58672295	58672295	16724991	1	638,	0,
#Partially deleted in new
chr15	58679158	58749791	chr15:58679158-58749791	0	-	58679158	58679158	8553170	3	124,151,312,	0,38418,70321,
#Deleted in new
chr15	58686410	58686617	chr15:58686410-58686617	7	+	58686410	58686410	16724991	1	207,	0,
#Partially deleted in new
chr15	58691105	58693125	chr15:58691105-58693125	7	-	58691105	58691105	16724991	2	528,1046,	0,974,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	58703851	58704154	chr15:58703851-58704154	3	-	58703851	58703851	8553170	1	303,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	58732187	58733149	chr15:58732187-58733149	7	+	58732187	58732187	16724991	2	226,439,	0,523,
#Partially deleted in new
chr15	58747344	58749719	chr15:58747344-58749719	1	-	58748911	58749534	789624	2	1692,240,	0,2135,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	58755624	58756247	chr15:58755624-58756247	7	-	58755624	58755624	16724991	2	140,175,	0,448,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	58760465	58760681	chr15:58760465-58760681	3	-	58760465	58760465	8553170	1	216,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	58768071	58770974	chr15:58768071-58770974	3	-	58768071	58768071	789624	2	808,588,	0,2315,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	58771191	58857552	chr15:58771191-58857552	0	+	58771395	58847340	789624	8	1044,58,65,159,103,174,195,3068,	0,16714,31121,39038,50525,76105,80579,83293,
#Partially deleted in new
chr15	58771285	58854591	chr15:58771285-58854591	0	+	58771395	58831786	789624	9	950,58,65,57,107,143,174,195,110,	0,16620,31027,38944,50431,60488,76011,80485,83196,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	58771313	58861900	chr15:58771313-58861900	3	+	58771395	58854610	789624	9	922,58,65,159,103,143,174,195,7419,	0,16592,30999,38916,50403,60460,75983,80457,83168,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	58771361	58857533	chr15:58771361-58857533	1	+	58771395	58854610	789624	9	874,58,65,159,103,143,174,195,3049,	0,16544,30951,38868,50355,60412,75935,80409,83123,
#Partially deleted in new
chr15	58796076	58831819	chr15:58796076-58831819	0	+	58796076	58796076	8553170	5	90,65,159,103,46,	0,6236,14153,25640,35697,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	58815271	58817728	chr15:58815271-58817728	3	+	58815271	58815271	8553170	2	455,71,	0,2386,
#Partially deleted in new
chr15	58856830	58865063	chr15:58856830-58865063	3	-	58856830	58856830	8553170	2	125,325,	0,7908,
#Partially deleted in new
chr15	58865005	58865303	chr15:58865005-58865303	7	+	58865005	58865005	16724991	1	298,	0,
#Partially deleted in new
chr15	58865174	59031216	chr15:58865174-59031216	0	+	59030822	59031216	789624	2	128,413,	0,165629,
#Partially deleted in new
chr15	58869658	58870134	chr15:58869658-58870134	7	+	58869658	58869658	16724991	1	476,	0,
#Partially deleted in new
chr15	58879044	58933653	chr15:58879044-58933653	3	-	58879998	58933565	789624	21	1063,161,145,315,171,125,181,164,86,167,104,150,119,50,469,28,48,198,65,88,250,	0,4581,7930,8181,9340,10385,11236,13852,14234,14776,15045,15388,18070,19758,20424,22215,33518,34454,37890,53311,54359,
#Partially deleted in new
chr15	58879418	58897120	chr15:58879418-58897120	0	-	58879998	58897120	789624	13	689,161,145,315,171,125,181,164,86,86,104,150,6,	0,4207,7556,7807,8966,10011,10862,13478,13860,14483,14671,15014,17696,
#Partially deleted in new
chr15	58879424	58887007	chr15:58879424-58887007	0	-	58879998	58887007	789624	4	352,128,161,33,	0,555,4201,7550,
#Partially deleted in new
chr15	58879428	58933579	chr15:58879428-58933579	0	-	58897140	58933565	789624	19	679,161,145,315,171,125,181,164,86,167,104,150,119,50,28,48,65,88,176,	0,4197,7546,7797,8956,10001,10852,13468,13850,14392,14661,15004,17686,19374,21831,33134,37506,52927,53975,
#Partially deleted in new
chr15	58879431	58887124	chr15:58879431-58887124	0	-	58879431	58879431	8553170	3	676,161,150,	0,4194,7543,
#Partially deleted in new
chr15	58879559	58933599	chr15:58879559-58933599	0	-	58916972	58933565	789624	19	548,161,145,315,171,125,181,164,86,167,104,150,119,50,28,48,198,65,196,	0,4066,7415,7666,8825,9870,10721,13337,13719,14261,14530,14873,17555,19243,21700,33003,33939,37375,53844,
#Partially deleted in new
chr15	58883478	58888422	chr15:58883478-58888422	0	-	58883478	58883478	8553170	4	308,145,315,38,	0,3496,3747,4906,
#Partially deleted in new
chr15	58887291	58888729	chr15:58887291-58888729	0	-	58887291	58887291	8553170	2	249,345,	0,1093,
#Partially deleted in new
chr15	58887456	58889490	chr15:58887456-58889490	0	-	58887456	58889490	789624	3	84,189,61,	0,928,1973,
#Partially deleted in new
chr15	58889143	58893292	chr15:58889143-58893292	0	-	58889143	58889143	8553170	3	411,164,14,	0,3753,4135,
#Partially deleted in new
chr15	58889966	58894082	chr15:58889966-58894082	3	+	58889966	58889966	8553170	2	277,106,	0,4010,
#Partially deleted in new
chr15	58893925	58899083	chr15:58893925-58899083	0	-	58893925	58893925	8553170	5	62,104,150,119,281,	0,164,507,3189,4877,
#Partially deleted in new
chr15	58894089	58933449	chr15:58894089-58933449	0	-	58897140	58933449	789624	10	104,150,119,50,28,48,198,65,88,46,	0,343,3025,4713,7170,18473,19409,22845,38266,39314,
#Partially deleted in new
chr15	58894157	58933579	chr15:58894157-58933579	0	-	58894157	58933565	789624	11	36,150,119,50,415,28,48,198,65,88,176,	0,275,2957,4645,5311,7102,18405,19341,22777,38198,39246,
#Partially deleted in new
chr15	58894188	58897564	chr15:58894188-58897564	0	-	58894188	58894188	8553170	3	5,150,450,	0,244,2926,
#Partially deleted in new
chr15	58894458	58933576	chr15:58894458-58933576	0	-	58916972	58933565	789624	6	124,119,50,28,65,173,	0,2656,4344,6801,22476,38945,
#Partially deleted in new
chr15	58897981	58933600	chr15:58897981-58933600	0	-	58897981	58897981	8553170	5	1899,28,65,88,197,	0,3278,18953,34374,35422,
#Partially deleted in new
chr15	58898815	58933598	chr15:58898815-58933598	1	-	58916972	58933565	789624	7	37,469,28,48,198,65,195,	0,653,2444,13747,14683,18119,34588,
#Partially deleted in new
chr15	58899610	58933594	chr15:58899610-58933594	0	-	58899610	58933565	789624	7	99,28,48,198,65,88,191,	0,1649,12952,13888,17324,32745,33793,
#Partially deleted in new
chr15	58899704	58933574	chr15:58899704-58933574	0	-	58899704	58933565	789624	5	233,28,65,88,171,	0,1555,17230,32651,33699,
#Partially deleted in new
chr15	58899790	58933576	chr15:58899790-58933576	0	-	58899790	58933565	789624	6	93,28,48,65,88,173,	0,1469,12772,17144,32565,33613,
#Partially deleted in new
chr15	58900416	58933558	chr15:58900416-58933558	0	-	58900416	58900416	8553170	7	342,28,48,198,65,88,155,	0,843,12146,13082,16518,31939,32987,
#Partially deleted in new
chr15	58900967	58912801	chr15:58900967-58912801	0	-	58900967	58900967	8553170	2	320,239,	0,11595,
#Partially deleted in new
chr15	58913498	58933600	chr15:58913498-58933600	0	-	58921564	58933565	789624	5	198,86,139,88,197,	0,3436,7947,18857,19905,
#Partially deleted in new
chr15	58913556	58933581	chr15:58913556-58933581	0	-	58913556	58913556	8553170	4	220,65,88,178,	0,3378,18799,19847,
#Partially deleted in new
chr15	58916573	58933574	chr15:58916573-58933574	0	-	58916573	58916573	8553170	3	426,88,171,	0,15782,16830,
#Deleted in new
chr15	58932151	58933616	chr15:58932151-58933616	0	-	58932151	58932151	8553170	2	292,213,	0,1252,
#Partially deleted in new
chr15	58967045	58967808	chr15:58967045-58967808	7	-	58967045	58967045	16724991	1	763,	0,
#Partially deleted in new
chr15	58987654	59097419	chr15:58987654-59097419	3	+	59030822	59094900	0	14	414,899,127,164,195,320,262,349,126,127,93,96,104,2637,	0,43149,64650,68027,70701,79109,88299,93281,96474,98004,102012,103404,104882,107128,
#Partially deleted in new
chr15	58987676	59031138	chr15:58987676-59031138	0	+	59004124	59031138	789624	3	392,173,335,	0,16325,43127,
#Partially deleted in new
chr15	58987951	59097054	chr15:58987951-59097054	1	+	59030822	59094900	0	14	117,899,127,164,195,320,262,349,153,127,93,96,104,2272,	0,42852,64353,67730,70404,78812,88002,92984,96150,97707,101715,103107,104585,106831,
#Partially deleted in new
chr15	58988137	59096431	chr15:58988137-59096431	1	+	59030822	59094900	0	14	268,899,127,164,195,320,262,349,126,127,93,96,128,1649,	0,42666,64167,67544,70218,78626,87816,92798,95991,97521,101529,102921,104375,106645,
#Partially deleted in new
chr15	59030822	59096424	chr15:59030822-59096424	1	+	59030822	59094900	0	13	880,127,164,195,320,262,349,153,127,93,96,128,1642,	0,21482,24859,27533,35941,45131,50113,53279,54836,58844,60236,61690,63960,
#Partially deleted in new
chr15	59031623	59058684	chr15:59031623-59058684	0	+	59031623	59058558	789624	4	79,127,164,329,	0,20681,24058,26732,
#Partially deleted in new
chr15	59049398	59050385	chr15:59049398-59050385	7	-	59049398	59049398	16724991	2	332,135,	0,852,
#Partially deleted in new
chr15	59080943	59084364	chr15:59080943-59084364	0	+	59080943	59080943	8553170	2	341,236,	0,3185,
#Partially deleted in new
chr15	59083939	59089696	chr15:59083939-59089696	0	+	59083939	59083939	8553170	3	315,127,30,	0,1719,5727,
#Partially deleted in new
chr15	59085505	59092614	chr15:59085505-59092614	0	+	59085505	59085505	8553170	4	280,93,96,102,	0,4161,5553,7007,
#Partially deleted in new
chr15	59085586	59096426	chr15:59085586-59096426	0	+	59085586	59085586	8553170	5	199,93,96,104,1644,	0,4080,5472,6950,9196,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	59093401	59095511	chr15:59093401-59095511	0	+	59093401	59093401	8553170	2	89,729,	0,1381,
#Partially deleted in new
chr15	59105077	59125045	chr15:59105077-59125045	3	+	59105268	59124877	789624	9	215,129,114,171,159,237,141,111,279,	0,2244,2479,9366,9640,11612,12150,18439,19689,
#Partially deleted in new
chr15	59105125	59114614	chr15:59105125-59114614	0	+	59105125	59105125	8553170	3	167,349,171,	0,2196,9318,
#Partially deleted in new
chr15	59105156	59125016	chr15:59105156-59125016	1	+	59105268	59124877	789624	6	136,171,159,237,111,250,	0,9287,9561,11533,18360,19610,
#Partially deleted in new
chr15	59105268	59125044	chr15:59105268-59125044	1	+	59105268	59123666	789624	8	24,129,114,171,159,237,141,1528,	0,2053,2288,9175,9449,11421,11959,18248,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	59115546	59116089	chr15:59115546-59116089	3	-	59115546	59115546	8553170	1	543,	0,
#Partially deleted in new
chr15	59116766	59123790	chr15:59116766-59123790	0	+	59116766	59116766	8553170	3	160,141,274,	0,461,6750,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr15	59132433	59372900	chr15:59132433-59372900	3	-	59137379	59372500	789624	28	5023,170,202,93,158,147,146,170,115,145,99,107,82,86,168,87,87,81,197,133,135,132,90,88,95,90,144,403,	0,5764,21156,25853,28639,30723,39463,41312,41692,45959,55684,63027,69892,72966,76247,78080,81794,82206,85457,90625,92255,95025,99268,104151,123850,128986,139872,240064,
#Partially deleted in new
chr15	59136365	59153642	chr15:59136365-59153642	0	-	59136684	59153642	789624	3	412,76,53,	0,1926,17224,
#Partially deleted in new
chr15	59163218	59227590	chr15:59163218-59227590	0	-	59163218	59227590	789624	6	85,146,197,133,135,132,	0,8678,54672,59840,61470,64240,
#Deleted in new
chr15	59171182	59171262	chr15:59171182-59171262	3	-	59171182	59171182	5263520	1	80,	0,
#Partially deleted in new
chr15	59171896	59208781	chr15:59171896-59208781	0	-	59171896	59208781	789624	8	146,170,115,145,107,82,86,101,	0,1849,2229,6496,23564,30429,33503,36784,
#Partially deleted in new
chr15	59178423	59206761	chr15:59178423-59206761	0	-	59178423	59178423	8553170	6	114,99,107,82,86,56,	0,9694,17037,23902,26976,28282,
#Partially deleted in new
chr15	59195496	59209000	chr15:59195496-59209000	0	-	59195496	59195496	8553170	4	71,82,86,320,	0,6829,9903,13184,
#Deleted in new
chr15	59206822	59208515	chr15:59206822-59208515	3	+	59206940	59208086	789624	1	1693,	0,
#Partially deleted in new
chr15	59208808	59218296	chr15:59208808-59218296	0	-	59208808	59218296	789624	6	40,87,87,81,197,70,	0,1705,5419,5831,9082,9418,
#Partially deleted in new
chr15	59227482	59372527	chr15:59227482-59372527	0	-	59231784	59372500	789624	6	108,90,95,90,144,30,	0,4219,28801,33937,44823,145015,
#Partially deleted in new
chr15	59272245	59372871	chr15:59272245-59372871	0	-	59272245	59272245	8553170	2	204,374,	0,100252,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	59341313	59341417	chr15:59341313-59341417	3	-	59341313	59341313	8553170	1	104,	0,
#Partially deleted in new
chr15	59372692	59492302	chr15:59372692-59492302	0	+	59458626	59492302	789624	5	87,83,97,274,32,	0,29583,85857,87240,119578,
#Partially deleted in new
chr15	59372994	59492375	chr15:59372994-59492375	0	+	59458626	59492375	789624	5	97,83,97,274,105,	0,29281,85555,86938,119276,
#Deleted in new
chr15	59401220	59402004	chr15:59401220-59402004	7	-	59401220	59401220	16724991	1	784,	0,
#Partially deleted in new
chr15	59406962	59408154	chr15:59406962-59408154	7	-	59406962	59406962	16724991	2	296,506,	0,686,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	59408904	59409015	chr15:59408904-59409015	3	+	59408904	59408904	8553170	1	111,	0,
#Partially deleted in new
chr15	59438172	59523549	chr15:59438172-59523549	3	+	59458626	59521378	789624	9	110,97,274,119,130,107,136,196,2296,	0,20377,21760,54098,69040,70690,76116,78472,83081,
#Partially deleted in new
chr15	59438200	59460640	chr15:59438200-59460640	0	+	59438200	59438200	8553170	3	82,97,708,	0,20349,21732,
#Partially deleted in new
chr15	59438200	59460115	chr15:59438200-59460115	0	+	59458626	59460115	789624	5	82,41,169,97,183,	0,823,1754,20349,21732,
#Partially deleted in new
chr15	59438204	59460116	chr15:59438204-59460116	0	+	59458626	59460116	789624	4	78,169,97,184,	0,1750,20345,21728,
#Partially deleted in new
chr15	59438230	59492389	chr15:59438230-59492389	0	+	59458570	59492389	789624	4	52,68,274,119,	0,20319,21702,54040,
#Partially deleted in new
chr15	59438244	59446681	chr15:59438244-59446681	0	+	59438244	59438244	8553170	5	38,41,169,99,117,	0,779,1710,6919,8320,
#Partially deleted in new
chr15	59438260	59446465	chr15:59438260-59446465	0	+	59438260	59438260	8553170	5	22,41,169,114,34,	0,763,1694,6888,8171,
#Partially deleted in new
chr15	59438463	59492328	chr15:59438463-59492328	0	+	59458570	59492328	789624	4	167,68,274,58,	0,20086,21469,53807,
#Partially deleted in new
chr15	59438495	59492321	chr15:59438495-59492321	0	+	59458626	59492321	789624	4	135,97,274,51,	0,20054,21437,53775,
#Partially deleted in new
chr15	59439953	59446624	chr15:59439953-59446624	0	+	59439953	59439953	8553170	3	170,54,193,	0,5255,6478,
#Partially deleted in new
chr15	59440033	59445568	chr15:59440033-59445568	0	+	59440033	59440033	8553170	2	90,360,	0,5175,
#Partially deleted in new
chr15	59443989	59460087	chr15:59443989-59460087	0	+	59458626	59460087	789624	3	321,97,155,	0,14560,15943,
#Partially deleted in new
chr15	59445105	59492323	chr15:59445105-59492323	0	+	59458626	59492323	789624	4	157,97,274,53,	0,13444,14827,47165,
#Deleted in new
chr15	59525421	59525881	chr15:59525421-59525881	7	-	59525421	59525421	16724991	1	460,	0,
#Deleted in new
chr15	59552614	59553093	chr15:59552614-59553093	7	-	59552614	59552614	16724991	1	479,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	59574102	59574222	chr15:59574102-59574222	7	-	59574102	59574102	16724991	1	120,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	59594874	59618222	chr15:59594874-59618222	0	+	59594874	59594874	8553170	6	40,61,134,80,190,44,	0,1419,14860,17027,21817,23304,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	59595728	59616739	chr15:59595728-59616739	0	+	59595728	59595728	8553170	5	185,112,134,80,48,	0,514,14006,16173,20963,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	59599642	59616809	chr15:59599642-59616809	0	+	59599642	59599642	8553170	5	69,134,80,161,118,	0,10092,12259,15405,17049,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	59599652	59611676	chr15:59599652-59611676	0	+	59599652	59599652	8553170	3	59,134,285,	0,10082,11739,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	59599676	59618500	chr15:59599676-59618500	0	+	59618238	59618500	789624	5	35,134,80,190,322,	0,10058,12225,17015,18502,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	59611783	59622723	chr15:59611783-59622723	3	+	59618238	59619555	789624	3	198,190,4545,	0,4908,6395,
#Partially deleted in new
chr15	59611783	59620008	chr15:59611783-59620008	1	+	59618238	59619555	789624	3	198,332,1830,	0,4766,6395,
#Deleted in new
chr15	59616433	59618398	chr15:59616433-59618398	0	+	59618238	59618398	789624	2	448,220,	0,1745,
#Partially deleted in new
chr15	59616530	59640239	chr15:59616530-59640239	0	+	59616530	59616530	8553170	2	351,150,	0,23559,
#Deleted in new
chr15	59617938	59618697	chr15:59617938-59618697	0	+	59618238	59618697	789624	2	148,519,	0,240,
#Partially deleted in new
chr15	59638061	59657538	chr15:59638061-59657538	3	-	59639131	59652277	0	5	1096,127,105,121,133,	0,4074,12607,14144,19344,
#Partially deleted in new
chr15	59638858	59657497	chr15:59638858-59657497	0	-	59638858	59638858	8553170	3	299,127,92,	0,3277,18547,
#Partially deleted in new
chr15	59638865	59657520	chr15:59638865-59657520	1	-	59639127	59652277	789624	4	292,105,121,115,	0,11803,13340,18540,
#Partially deleted in new
chr15	59638868	59657514	chr15:59638868-59657514	1	-	59639131	59652277	0	6	289,127,105,121,219,109,	0,3267,11800,13337,17946,18537,
#Partially deleted in new
chr15	59639108	59657479	chr15:59639108-59657479	1	-	59639131	59652277	0	5	49,127,105,121,356,	0,3027,11560,13097,18015,
#Partially deleted in new
chr15	59639112	59657520	chr15:59639112-59657520	1	-	59639131	59652277	789624	4	45,127,121,115,	0,3023,13093,18293,
#Partially deleted in new
chr15	59642135	59657475	chr15:59642135-59657475	0	-	59642135	59642135	8553170	3	127,96,70,	0,8533,15270,
#Partially deleted in new
chr15	59642213	59657521	chr15:59642213-59657521	0	-	59642213	59652277	789624	4	49,96,121,116,	0,8455,9992,15192,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	59644297	59672302	chr15:59644297-59672302	3	-	59644297	59644297	8553170	2	29,68,	0,27937,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	59651184	59657541	chr15:59651184-59657541	0	-	59651184	59651184	8553170	2	1142,136,	0,6221,
#Partially deleted in new
chr15	59652299	59657483	chr15:59652299-59657483	0	-	59652299	59652299	8553170	3	27,97,78,	0,579,5106,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	59659145	59689534	chr15:59659145-59689534	1	-	59664068	59689440	789624	10	4975,99,87,132,103,177,177,68,107,400,	0,9746,10130,12037,13491,18765,20446,21095,23262,29989,
#Partially deleted in new
chr15	59662864	59689443	chr15:59662864-59689443	1	-	59664068	59689440	789624	10	1256,99,87,132,103,177,177,68,107,309,	0,6027,6411,8318,9772,15046,16727,17376,19543,26270,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	59662892	59668949	chr15:59662892-59668949	0	-	59662892	59662892	8553170	4	1228,93,36,58,	0,2457,5210,5999,
#Partially deleted in new
chr15	59663365	59689280	chr15:59663365-59689280	1	-	59664068	59682457	789624	10	755,99,87,132,103,177,177,68,107,146,	0,5526,5910,7817,9271,14545,16226,16875,19042,25769,
#Partially deleted in new
chr15	59663378	59678016	chr15:59663378-59678016	0	-	59664068	59678016	789624	7	742,36,99,87,132,103,106,	0,4724,5513,5897,7804,9258,14532,
#Partially deleted in new
chr15	59663756	59688926	chr15:59663756-59688926	3	-	59664068	59688860	789624	10	364,99,87,132,103,177,177,68,107,195,	0,5135,5519,7426,8880,14154,15835,16484,18651,24975,
#Deleted in new
chr15	59668754	59669362	chr15:59668754-59669362	0	-	59668754	59668754	8553170	2	236,87,	0,521,
#Partially deleted in new
chr15	59669288	59680296	chr15:59669288-59680296	0	-	59678805	59680296	789624	7	74,132,103,177,87,177,56,	0,1894,3348,8622,9459,10303,10952,
#Partially deleted in new
chr15	59671180	59678640	chr15:59671180-59678640	0	-	59671180	59671180	8553170	3	134,103,730,	0,1456,6730,
#Deleted in new
chr15	59676756	59677321	chr15:59676756-59677321	7	+	59676756	59676756	16724991	1	565,	0,
#Partially deleted in new
chr15	59677812	59689339	chr15:59677812-59689339	0	-	59677812	59677812	8553170	5	275,177,68,107,205,	0,1779,2428,4595,11322,
#Partially deleted in new
chr15	59678048	59689320	chr15:59678048-59689320	0	-	59678048	59678048	8553170	6	39,59,177,68,107,186,	0,727,1543,2192,4359,11086,
#Partially deleted in new
chr15	59678571	59682502	chr15:59678571-59682502	0	-	59678571	59678571	8553170	4	263,177,68,95,	0,1020,1669,3836,
#Partially deleted in new
chr15	59679255	59689309	chr15:59679255-59689309	0	-	59679255	59679255	8553170	4	513,68,107,175,	0,985,3152,9879,
#Deleted in new
chr15	59688516	59689418	chr15:59688516-59689418	3	+	59688516	59688516	8553170	2	60,342,	0,560,
#Deleted in new
chr15	59768351	59769146	chr15:59768351-59769146	7	+	59768351	59768351	16724991	1	795,	0,
#Deleted in new
chr15	59871510	59873495	chr15:59871510-59873495	7	-	59871510	59871510	16724991	1	1985,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	59964941	59966084	chr15:59964941-59966084	7	+	59964941	59964941	16724991	2	185,656,	0,487,
#Partially deleted in new
chr15	60004221	60007441	chr15:60004221-60007441	3	+	60004963	60005941	789624	2	422,2535,	0,685,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	60004233	60061730	chr15:60004233-60061730	0	+	60004233	60004233	8553170	4	410,154,120,83,	0,21522,31876,57414,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	60036129	60041899	chr15:60036129-60041899	0	+	60036129	60036129	8553170	2	113,288,	0,5482,
#Deleted in new
chr15	60053203	60054092	chr15:60053203-60054092	7	-	60053203	60053203	16724991	1	889,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	60073553	60118320	chr15:60073553-60118320	3	-	60073553	60073553	8553170	3	495,135,127,	0,1247,44640,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr15	60347133	60397986	chr15:60347133-60397986	3	-	60347629	60386075	0	14	556,123,59,96,94,60,80,91,114,95,100,59,105,44,	0,1941,4059,4590,5249,7020,8785,10012,13807,17295,35208,38894,43079,50809,
#Partially deleted in new
chr15	60347326	60398043	chr15:60347326-60398043	1	-	60347629	60386075	0	13	363,123,59,96,94,60,80,91,114,95,100,59,101,	0,1748,3866,4397,5056,6827,8592,9819,13614,17102,35015,38701,50616,
#Partially deleted in new
chr15	60347331	60397985	chr15:60347331-60397985	1	-	60347629	60397913	0	13	358,123,59,96,94,60,80,91,114,95,100,59,115,	0,1743,3861,4392,5051,6822,8587,9814,13609,17097,35010,38696,50539,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	60347336	60384827	chr15:60347336-60384827	0	-	60347336	60347336	8553170	10	353,59,96,94,60,80,91,114,95,2486,	0,3856,4387,5046,6817,8582,9809,13604,17092,35005,
#Partially deleted in new
chr15	60347336	60387097	chr15:60347336-60387097	0	-	60351812	60386075	789624	12	353,123,59,96,98,60,80,91,114,95,100,1070,	0,1738,3856,4387,5042,6817,8582,9809,13604,17092,35005,38691,
#Partially deleted in new
chr15	60347341	60397986	chr15:60347341-60397986	1	-	60347629	60386075	0	14	348,123,59,96,94,60,80,91,114,95,100,59,81,44,	0,1733,3851,4382,5041,6812,8577,9804,13599,17087,35000,38686,49916,50601,
#Partially deleted in new
chr15	60349074	60351553	chr15:60349074-60351553	0	-	60349074	60349074	8553170	2	123,361,	0,2118,
#Partially deleted in new
chr15	60351191	60374505	chr15:60351191-60374505	0	-	60351191	60374505	789624	9	60,96,94,60,80,91,114,95,54,	0,532,1191,2962,4727,5954,9749,13237,23260,
#Partially deleted in new
chr15	60351723	60398033	chr15:60351723-60398033	0	-	60351723	60360946	789624	9	96,94,60,80,91,114,95,59,91,	0,659,2430,4195,5422,9217,12705,34304,46219,
#Partially deleted in new
chr15	60351732	60398742	chr15:60351732-60398742	0	-	60351732	60386075	789624	10	87,94,60,80,91,114,95,100,59,98,	0,650,2421,4186,5413,9208,12696,30609,34295,46912,
#Partially deleted in new
chr15	60351732	60397986	chr15:60351732-60397986	0	-	60351732	60360946	789624	8	87,94,60,80,91,114,95,44,	0,650,2421,4186,5413,9208,12696,46210,
#Partially deleted in new
chr15	60351781	60397986	chr15:60351781-60397986	0	-	60351781	60386075	789624	8	38,94,60,80,91,114,59,44,	0,601,2372,4137,5364,9159,34246,46161,
#Partially deleted in new
chr15	60351786	60397986	chr15:60351786-60397986	0	-	60374620	60386075	789624	11	33,94,60,80,91,114,95,64,100,59,44,	0,596,2367,4132,5359,9154,12642,22832,30555,34241,46156,
#Partially deleted in new
chr15	60352382	60397338	chr15:60352382-60397338	0	-	60352382	60386075	789624	9	94,60,80,91,114,95,100,59,84,	0,1771,3536,4763,8558,12046,29959,33645,44872,
#Partially deleted in new
chr15	60354152	60397974	chr15:60354152-60397974	0	-	60357204	60386075	789624	10	61,80,91,124,95,100,59,105,81,32,	0,1766,2993,6778,10276,28189,31875,36060,43105,43790,
#Partially deleted in new
chr15	60354153	60397964	chr15:60354153-60397964	0	-	60354153	60360946	789624	7	60,80,91,114,95,81,22,	0,1765,2992,6787,10275,43104,43789,
#Partially deleted in new
chr15	60355427	60397988	chr15:60355427-60397988	0	-	60355427	60355427	8553170	7	571,91,114,95,100,59,46,	0,1718,5513,9001,26914,30600,42515,
#Partially deleted in new
chr15	60355918	60397986	chr15:60355918-60397986	0	-	60355918	60386075	789624	9	80,91,114,95,100,59,148,81,44,	0,1227,5022,8510,26423,30109,40361,41339,42024,
#Partially deleted in new
chr15	60355918	60397986	chr15:60355918-60397986	0	-	60355918	60360946	789624	7	80,91,114,95,59,81,44,	0,1227,5022,8510,30109,41339,42024,
#Partially deleted in new
chr15	60355918	60397968	chr15:60355918-60397968	0	-	60355918	60386075	789624	8	80,91,114,95,100,59,81,98,	0,1227,5022,8510,26423,30109,41339,41952,
#Partially deleted in new
chr15	60355918	60391297	chr15:60355918-60391297	0	-	60355918	60386075	789624	7	80,91,114,95,100,59,55,	0,1227,5022,8510,26423,30109,35324,
#Partially deleted in new
chr15	60355960	60398001	chr15:60355960-60398001	0	-	60355960	60360946	789624	7	38,91,114,95,59,105,59,	0,1185,4980,8468,30067,34252,41982,
#Partially deleted in new
chr15	60357145	60391127	chr15:60357145-60391127	0	-	60357145	60386075	789624	7	91,114,95,100,59,105,105,	0,3795,7283,25196,28882,33067,33877,
#Partially deleted in new
chr15	60357190	60397986	chr15:60357190-60397986	0	-	60357190	60386075	789624	7	46,114,95,100,59,55,44,	0,3750,7238,25151,28837,39182,40752,
#Partially deleted in new
chr15	60357193	60391151	chr15:60357193-60391151	0	-	60357193	60386075	789624	7	43,114,95,100,59,105,44,	0,3747,7235,25148,28834,33019,33914,
#Partially deleted in new
chr15	60360940	60397984	chr15:60360940-60397984	0	-	60360940	60386075	789624	6	114,95,100,59,148,42,	0,3488,21401,25087,35339,37002,
#Partially deleted in new
chr15	60360941	60397974	chr15:60360941-60397974	0	-	60360941	60393110	789624	6	113,95,100,59,403,32,	0,3487,21400,25086,32096,37001,
#Partially deleted in new
chr15	60360966	60397986	chr15:60360966-60397986	0	-	60360966	60386075	789624	6	88,95,100,59,277,44,	0,3462,21375,25061,35184,36976,
#Partially deleted in new
chr15	60361447	60397986	chr15:60361447-60397986	0	-	60361447	60361447	8553170	5	39,95,59,277,44,	0,2981,24580,34703,36495,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	60362626	60397986	chr15:60362626-60397986	0	-	60362626	60362626	8553170	5	396,95,100,59,44,	0,1802,19715,23401,35316,
#Partially deleted in new
chr15	60364428	60402883	chr15:60364428-60402883	0	-	60364428	60386075	789624	4	95,100,59,115,	0,17913,21599,38340,
#Partially deleted in new
chr15	60382347	60397988	chr15:60382347-60397988	0	-	60382347	60386075	789624	5	94,59,277,81,46,	0,3680,13803,14910,15595,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	60385556	60397986	chr15:60385556-60397986	0	-	60385556	60385556	8553170	2	530,44,	0,12386,
#Deleted in new
chr15	60390370	60390682	chr15:60390370-60390682	7	+	60390370	60390370	16724991	1	312,	0,
#Partially deleted in new
chr15	60393096	60397973	chr15:60393096-60397973	0	-	60393096	60393110	8553170	4	344,277,81,31,	0,3054,4161,4846,
#Deleted in new
chr15	60395644	60397986	chr15:60395644-60397986	0	-	60395644	60395644	8553170	3	783,81,44,	0,1613,2298,
#Deleted in new
chr15	60395906	60397988	chr15:60395906-60397988	0	-	60395906	60395906	8553170	2	521,46,	0,2036,
#Deleted in new
chr15	60404462	60404960	chr15:60404462-60404960	7	+	60404462	60404462	16724991	1	498,	0,
#Deleted in new
chr15	60409233	60409420	chr15:60409233-60409420	7	-	60409233	60409233	16724991	1	187,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr15	60419608	60479145	chr15:60419608-60479145	3	-	60423633	60477977	789624	16	4154,259,51,85,130,176,994,182,160,117,138,120,262,105,133,143,	0,8820,12325,16534,22807,28361,29239,33994,35394,35717,37048,46985,48452,56454,58328,59394,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr15	60419612	60479160	chr15:60419612-60479160	0	-	60468086	60477977	789624	16	4150,259,51,85,130,176,994,182,160,117,138,120,102,105,133,158,	0,8816,12321,16530,22803,28357,29235,33990,35390,35713,37044,46981,48448,56450,58324,59390,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	60421475	60443071	chr15:60421475-60443071	0	-	60421475	60421475	8553170	5	2287,259,51,85,656,	0,6953,10458,14667,20940,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	60437819	60453783	chr15:60437819-60453783	0	-	60437819	60437819	8553170	3	4726,994,181,	0,11028,15783,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	60447490	60448951	chr15:60447490-60448951	0	-	60447490	60447490	8553170	2	655,104,	0,1357,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	60451094	60479073	chr15:60451094-60479073	1	-	60453575	60477977	789624	9	2690,160,117,138,120,262,105,133,71,	0,3908,4231,5562,15499,16966,24968,26842,27908,
#Partially deleted in new
chr15	60453711	60478929	chr15:60453711-60478929	0	-	60453711	60477977	789624	9	73,160,117,138,120,262,105,133,362,	0,1291,1614,2945,12882,14349,22351,24225,24856,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	60454687	60455442	chr15:60454687-60455442	0	-	60454687	60454687	8553170	2	475,117,	0,638,
#Partially deleted in new
chr15	60455355	60479110	chr15:60455355-60479110	0	-	60456784	60477977	789624	5	87,138,105,133,108,	0,1301,20707,22581,23647,
#Partially deleted in new
chr15	60456665	60479110	chr15:60456665-60479110	0	-	60468086	60479007	789624	5	129,120,102,105,108,	0,9928,11395,19397,22337,
#Partially deleted in new
chr15	60456760	60479132	chr15:60456760-60479132	0	-	60468086	60477977	789624	6	34,120,102,105,133,61,	0,9833,11300,19302,21176,22311,
#Partially deleted in new
chr15	60456764	60479107	chr15:60456764-60479107	0	-	60456764	60456764	8553170	6	30,120,102,105,83,105,	0,9829,11296,19298,21803,22238,
#Partially deleted in new
chr15	60466672	60479112	chr15:60466672-60479112	0	-	60466672	60466672	8553170	6	41,102,105,133,70,110,	0,1388,9390,11264,11895,12330,
#Partially deleted in new
chr15	60466686	60479103	chr15:60466686-60479103	0	-	60466686	60477977	789624	5	27,262,105,133,32,	0,1374,9376,11250,12385,
#Partially deleted in new
chr15	60468170	60479103	chr15:60468170-60479103	0	-	60468170	60477977	789624	5	152,105,133,93,101,	0,7892,9766,10397,10832,
#Partially deleted in new
chr15	60468186	60479113	chr15:60468186-60479113	0	-	60468186	60477977	789624	5	136,105,133,83,111,	0,7876,9750,10381,10816,
#Partially deleted in new
chr15	60479180	60528624	chr15:60479180-60528624	1	+	60479180	60479180	789624	5	218,68,126,304,45,	0,9343,31227,40785,49399,
#Partially deleted in new
chr15	60479219	60529889	chr15:60479219-60529889	1	+	60479219	60479219	789624	5	179,68,126,148,348,	0,9304,31188,49360,50322,
#Partially deleted in new
chr15	60488283	61229319	chr15:60488283-61229319	3	-	60497454	61229218	0	11	9336,113,111,108,133,122,396,142,86,30,267,	0,11608,12675,14476,15251,17224,22942,26332,43482,190373,740769,
#Partially deleted in new
chr15	60497263	60627463	chr15:60497263-60627463	1	-	60497454	60627374	0	12	356,113,111,108,133,122,396,142,86,76,82,226,	0,2628,3695,5496,6271,8244,13962,17352,34502,59589,60961,129974,
#Partially deleted in new
chr15	60497263	60627444	chr15:60497263-60627444	1	-	60497454	60627374	789624	11	356,113,111,108,133,122,396,142,86,134,207,	0,2628,3695,5496,6271,8244,13962,17352,34502,117630,129974,
#Partially deleted in new
chr15	60497284	60592541	chr15:60497284-60592541	1	-	60497454	60592417	789624	10	335,113,111,108,133,122,396,142,86,155,	0,2607,3674,5475,6250,8223,13941,17331,34481,95102,
#Partially deleted in new
chr15	60505605	60512097	chr15:60505605-60512097	0	-	60505605	60505605	8553170	3	24,396,65,	0,5620,6427,
#Partially deleted in new
chr15	60510407	60547964	chr15:60510407-60547964	0	+	60510407	60510407	8553170	4	126,148,202,247,	0,18172,35857,37310,
#Partially deleted in new
chr15	60511293	61229133	chr15:60511293-61229133	0	-	60677155	61229133	789624	6	328,142,86,82,30,81,	0,3322,20472,165857,167363,717759,
#Partially deleted in new
chr15	60511456	60706352	chr15:60511456-60706352	0	-	60511456	60511456	8553170	5	165,142,86,30,121,	0,3159,20309,167200,194775,
#Partially deleted in new
chr15	60511591	60593126	chr15:60511591-60593126	0	-	60511591	60593009	789624	4	30,142,86,319,	0,3024,20174,81216,
#Partially deleted in new
chr15	60520060	60547964	chr15:60520060-60547964	0	+	60520060	60520060	8553170	3	235,202,247,	0,26204,27657,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	60528072	60592517	chr15:60528072-60592517	0	-	60528072	60528072	8553170	2	3779,131,	0,64314,
#Partially deleted in new
chr15	60529972	60545159	chr15:60529972-60545159	3	+	60529972	60529972	8553170	2	79,355,	0,14832,
#Partially deleted in new
chr15	60531527	61229243	chr15:60531527-61229243	0	-	60531527	60531527	8553170	3	324,30,191,	0,147129,697525,
#Deleted in new
chr15	60558079	60558401	chr15:60558079-60558401	7	+	60558079	60558079	16724991	1	322,	0,
#Deleted in new
chr15	60593026	60593460	chr15:60593026-60593460	3	+	60593026	60593026	8553170	1	434,	0,
#Partially deleted in new
chr15	60650620	61229225	chr15:60650620-61229225	0	-	60650620	60650620	8553170	4	88,82,30,173,	0,26530,28036,578432,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	60677108	60677272	chr15:60677108-60677272	3	-	60677108	60677108	8553170	1	164,	0,
#Partially deleted in new
chr15	60678223	61229231	chr15:60678223-61229231	0	-	60678223	60678223	8553170	2	463,179,	0,550829,
#Partially deleted in new
chr15	60681568	60686888	chr15:60681568-60686888	0	+	60681568	60681568	8553170	2	427,162,	0,5158,
#Partially deleted in new
chr15	60681626	60686858	chr15:60681626-60686858	3	+	60681626	60681626	789624	3	369,75,132,	0,732,5100,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	60736768	60736886	chr15:60736768-60736886	7	+	60736768	60736768	16724991	1	118,	0,
#Deleted in new
chr15	60763905	60765035	chr15:60763905-60765035	0	+	60763905	60763905	8553170	2	176,294,	0,836,
#Deleted in new
chr15	60764739	60765625	chr15:60764739-60765625	3	+	60764739	60764739	8553170	2	361,445,	0,441,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	60847756	60849068	chr15:60847756-60849068	3	-	60847756	60847756	8553170	1	1312,	0,
#Partially deleted in new
chr15	61038825	61229233	chr15:61038825-61229233	0	-	61038825	61038825	8553170	3	302,31,181,	0,2278,190227,
#Partially deleted in new
chr15	61176067	61229155	chr15:61176067-61229155	0	-	61176442	61229155	789624	2	389,103,	0,52985,
#Partially deleted in new
chr15	61181248	61195938	chr15:61181248-61195938	3	+	61181248	61181248	8553170	4	149,146,101,80,	0,1688,12786,14610,
#Partially deleted in new
chr15	61211912	61214231	chr15:61211912-61214231	3	+	61211912	61211912	8553170	2	33,448,	0,1871,
#Deleted in new
chr15	61239905	61240331	chr15:61239905-61240331	3	+	61239905	61239905	8553170	1	426,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	61298790	61635449	chr15:61298790-61635449	3	-	61298790	61298790	8553170	5	1749,50,63,88,35,	0,101591,208387,291125,336624,
#Partially deleted in new
chr15	61598513	61605241	chr15:61598513-61605241	3	+	61598513	61598513	8553170	2	88,837,	0,5891,
#Partially deleted in new
chr15	61639348	61653201	chr15:61639348-61653201	0	-	61639348	61639348	8553170	2	364,13,	0,13840,
#Partially deleted in new
chr15	61639374	61715171	chr15:61639374-61715171	3	-	61639374	61639374	8553170	2	338,57,	0,75740,
#Deleted in new
chr15	61674766	61675212	chr15:61674766-61675212	7	+	61674766	61674766	16724991	1	446,	0,
#Deleted in new
chr15	61729849	61731389	chr15:61729849-61731389	3	+	61729849	61729849	789624	2	155,808,	0,732,
#Partially deleted in new
chr15	61834681	61935738	chr15:61834681-61935738	3	+	61834681	61834681	8553170	5	96,76,144,229,279,	0,14715,44668,92447,100778,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	61834751	61852152	chr15:61834751-61852152	1	+	61834751	61834751	8553170	3	26,76,297,	0,14645,17104,
#Boundary problem: need 83, got 0, diff 83, mapped 0.0
chr15	61852388	62060473	chr15:61852388-62060473	3	-	61854456	62060374	789624	83	2170,84,124,89,115,124,46,164,76,114,82,140,114,112,70,82,141,142,236,127,134,129,165,105,390,295,122,161,265,150,87,366,93,230,248,170,113,154,148,305,168,104,117,163,60,80,157,134,109,148,305,168,104,117,163,60,80,154,140,79,130,118,124,137,115,193,143,95,130,63,172,107,128,58,81,60,60,110,102,96,43,44,199,	0,2482,3897,11051,16270,17111,19600,20857,22487,23343,24584,26218,28220,28454,29174,29358,30207,31739,37776,54875,56603,57788,59451,60922,63244,64952,65747,66900,67678,68109,69558,70008,73067,74702,77112,78701,81830,84208,88258,89374,93326,93918,94804,97054,97969,98556,99435,102032,106219,107059,109200,109982,110360,111446,112310,113694,114979,116910,120236,121065,121899,124693,126237,128953,130070,131431,132468,138611,139284,148175,154919,156266,158083,159718,160650,161544,168090,171022,181052,182568,188935,191823,207886,
#Boundary problem: need 85, got 0, diff 85, mapped 0.0
chr15	61852388	62060447	chr15:61852388-62060447	1	-	61854456	62060374	789624	85	2170,84,124,89,115,124,46,164,76,114,82,140,114,112,70,82,141,142,236,127,134,129,165,105,390,295,122,161,265,150,87,366,93,230,248,170,113,154,148,305,168,104,117,163,60,80,157,134,109,148,305,168,104,117,163,60,80,154,140,79,130,118,124,137,115,193,143,95,130,63,172,107,128,58,81,60,60,110,66,63,102,96,43,44,173,	0,2482,3897,11051,16270,17111,19600,20857,22487,23343,24584,26218,28220,28454,29174,29358,30207,31739,37776,54875,56603,57788,59451,60922,63244,64952,65747,66900,67678,68109,69558,70008,73067,74702,77112,78701,81830,84208,88258,89374,93326,93918,94804,97054,97969,98556,99435,102032,106219,107059,109200,109982,110360,111446,112310,113694,114979,116910,120236,121065,121899,124693,126237,128953,130070,131431,132468,138611,139284,148175,154919,156266,158083,159718,160650,161544,168090,171022,171391,175969,181052,182568,188935,191823,207886,
#Boundary problem: need 85, got 0, diff 85, mapped 0.0
chr15	61852392	62060448	chr15:61852392-62060448	1	-	61854456	62060374	789624	85	2166,84,124,89,115,124,46,164,76,114,82,140,114,112,70,82,141,142,236,127,134,129,165,105,390,295,122,161,265,150,87,366,93,230,248,170,113,154,148,305,168,104,117,163,60,80,157,134,109,148,305,168,104,117,163,60,80,154,140,79,130,118,124,137,115,193,143,95,130,63,172,107,128,58,81,60,60,110,66,63,102,96,43,44,174,	0,2478,3893,11047,16266,17107,19596,20853,22483,23339,24580,26214,28216,28450,29170,29354,30203,31735,37772,54871,56599,57784,59447,60918,63240,64948,65743,66896,67674,68105,69554,70004,73063,74698,77108,78697,81826,84204,88254,89370,93322,93914,94800,97050,97965,98552,99431,102028,106215,107055,109196,109978,110356,111442,112306,113690,114975,116906,120232,121061,121895,124689,126233,128949,130066,131427,132464,138607,139280,148171,154915,156262,158079,159714,160646,161540,168086,171018,171387,175965,181048,182564,188931,191819,207882,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	61852403	61864760	chr15:61852403-61864760	0	-	61852403	61852403	8553170	4	2155,84,124,1321,	0,2467,3882,11036,
#Boundary problem: need 48, got 0, diff 48, mapped 0.0
chr15	61853451	61958653	chr15:61853451-61958653	0	-	61934295	61958653	8553170	48	1107,84,124,89,180,115,124,46,164,76,114,82,140,114,112,70,82,141,236,127,134,129,165,105,390,295,122,161,265,150,87,366,93,230,248,170,113,148,305,168,104,117,163,60,80,157,134,46,	0,1419,2834,9988,11189,15207,16048,18537,19794,21424,22280,23521,25155,27157,27391,28111,28295,29144,36713,53812,55540,56725,58388,59859,62181,63889,64684,65837,66615,67046,68495,68945,72004,73639,76049,77638,80767,87195,88311,92263,92855,93741,95991,96906,97493,98372,100969,105156,
#Deleted in new
chr15	61854412	61856793	chr15:61854412-61856793	0	-	61854412	61854412	8553170	3	146,84,508,	0,458,1873,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	61861108	61894164	chr15:61861108-61894164	3	+	61861108	61861108	8553170	3	517,29,43,	0,29725,33013,
#Partially deleted in new
chr15	61864305	62060448	chr15:61864305-62060448	1	-	61867923	62060374	789624	82	3642,115,124,46,164,76,114,82,140,114,112,70,82,141,142,236,127,134,129,165,105,390,295,122,161,265,150,87,366,93,230,248,170,113,154,148,305,168,104,117,163,60,80,157,134,109,148,305,168,104,117,163,60,80,154,140,79,130,118,124,137,115,193,143,95,130,63,172,107,128,58,81,60,60,110,66,63,102,96,43,44,174,	0,4353,5194,7683,8940,10570,11426,12667,14301,16303,16537,17257,17441,18290,19822,25859,42958,44686,45871,47534,49005,51327,53035,53830,54983,55761,56192,57641,58091,61150,62785,65195,66784,69913,72291,76341,77457,81409,82001,82887,85137,86052,86639,87518,90115,94302,95142,97283,98065,98443,99529,100393,101777,103062,104993,108319,109148,109982,112776,114320,117036,118153,119514,120551,126694,127367,136258,143002,144349,146166,147801,148733,149627,156173,159105,159474,164052,169135,170651,177018,179906,195969,
#Partially deleted in new
chr15	61864305	62060447	chr15:61864305-62060447	1	-	61867923	62060374	789624	82	3642,115,124,46,164,76,114,82,140,114,112,70,82,141,142,236,127,134,129,165,105,390,295,122,161,265,150,87,366,93,230,248,170,113,154,148,305,168,104,117,163,60,80,157,134,109,148,305,168,104,117,163,60,80,154,140,79,130,118,124,137,115,193,143,95,130,63,172,107,128,58,81,60,60,110,66,63,102,96,43,44,173,	0,4353,5194,7683,8940,10570,11426,12667,14301,16303,16537,17257,17441,18290,19822,25859,42958,44686,45871,47534,49005,51327,53035,53830,54983,55761,56192,57641,58091,61150,62785,65195,66784,69913,72291,76341,77457,81409,82001,82887,85137,86052,86639,87518,90115,94302,95142,97283,98065,98443,99529,100393,101777,103062,104993,108319,109148,109982,112776,114320,117036,118153,119514,120551,126694,127367,136258,143002,144349,146166,147801,148733,149627,156173,159105,159474,164052,169135,170651,177018,179906,195969,
#Partially deleted in new
chr15	61865557	61920152	chr15:61865557-61920152	0	-	61868628	61920152	8553170	25	3216,124,46,164,76,114,82,140,114,112,70,82,141,142,236,127,134,129,165,105,390,295,122,161,86,	0,3942,6431,7688,9318,10174,11415,13049,15051,15285,16005,16189,17038,18570,24607,41706,43434,44619,46282,47753,50075,51783,52578,53731,54509,
#Partially deleted in new
chr15	61867743	62060448	chr15:61867743-62060448	1	-	61867923	62060374	789624	80	204,115,124,46,164,76,114,82,140,114,112,70,82,141,142,236,127,134,129,165,105,390,295,122,161,265,150,87,366,93,230,248,170,113,154,148,305,168,104,117,163,60,80,157,134,109,148,305,168,104,117,163,60,80,154,140,79,130,118,124,137,115,193,143,95,130,63,172,107,128,58,81,60,60,110,102,96,43,44,174,	0,915,1756,4245,5502,7132,7988,9229,10863,12865,13099,13819,14003,14852,16384,22421,39520,41248,42433,44096,45567,47889,49597,50392,51545,52323,52754,54203,54653,57712,59347,61757,63346,66475,68853,72903,74019,77971,78563,79449,81699,82614,83201,84080,86677,90864,91704,93845,94627,95005,96091,96955,98339,99624,101555,104881,105710,106544,109338,110882,113598,114715,116076,117113,123256,123929,132820,139564,140911,142728,144363,145295,146189,152735,155667,165697,167213,173580,176468,192531,
#Partially deleted in new
chr15	61875786	61881589	chr15:61875786-61881589	0	-	61875786	61875786	8553170	6	59,114,140,114,112,27,	0,1186,2820,4822,5056,5776,
#Partially deleted in new
chr15	61906642	61917532	chr15:61906642-61917532	0	-	61906642	61906642	8553170	7	748,134,129,165,105,390,192,	0,2349,3534,5197,6668,8990,10698,
#Partially deleted in new
chr15	61951859	61961671	chr15:61951859-61961671	0	-	61951859	61951859	8553170	5	121,88,109,148,83,	0,2607,6748,7588,9729,
#Partially deleted in new
chr15	61983712	61991748	chr15:61983712-61991748	0	-	61983712	61983712	8553170	4	300,143,95,76,	0,1144,7287,7960,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	62060502	62061274	chr15:62060502-62061274	1	+	62060502	62060502	8553170	2	341,307,	0,465,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	62060513	62062434	chr15:62060513-62062434	3	+	62060513	62060513	789624	1	1921,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	62066976	62070917	chr15:62066976-62070917	3	+	62067613	62068723	789624	2	112,3333,	0,608,
#Deleted in new
chr15	62082449	62083305	chr15:62082449-62083305	7	-	62082449	62082449	16724991	1	856,	0,
#Deleted in new
chr15	62163534	62165283	chr15:62163534-62165283	3	-	62163889	62164984	789624	2	1490,89,	0,1660,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	62196144	62203318	chr15:62196144-62203318	3	-	62196144	62196144	789624	4	618,118,71,1562,	0,784,2659,5612,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	62227895	62243082	chr15:62227895-62243082	7	-	62227895	62227895	16724991	4	255,126,180,50,	0,6791,14870,15137,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	62230383	62231895	chr15:62230383-62231895	3	-	62230383	62230383	8553170	4	201,73,180,110,	0,554,1050,1402,
#Partially deleted in new
chr15	62234401	62243180	chr15:62234401-62243180	4	-	62234401	62234401	16724991	3	411,180,148,	0,8364,8631,
#Partially deleted in new
chr15	62242750	62253235	chr15:62242750-62253235	5	-	62242750	62242750	16724991	23	189,149,103,91,217,85,77,208,974,84,108,95,142,59,86,74,55,46,102,60,55,24,113,	0,281,513,698,875,1346,1865,2023,2931,4278,4555,4763,5646,6120,7576,7757,7934,8238,9132,9419,9905,10079,10372,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	62244329	62244595	chr15:62244329-62244595	3	-	62244329	62244329	8553170	1	266,	0,
#Partially deleted in new
chr15	62245706	62248795	chr15:62245706-62248795	4	-	62245706	62245706	16724991	5	949,84,108,142,28,	0,1322,1599,2690,3061,
#Partially deleted in new
chr15	62253729	62270680	chr15:62253729-62270680	7	-	62253729	62253729	16724991	18	101,287,45,88,108,76,132,59,105,72,55,45,100,40,52,48,122,86,	0,377,796,1307,1588,1798,3838,4326,6192,6379,6557,6871,8417,9341,9816,9981,14598,16865,
#Deleted in new
chr15	62255685	62256421	chr15:62255685-62256421	7	-	62255685	62255685	16724991	3	97,97,40,	0,189,696,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	62257951	62261415	chr15:62257951-62261415	4	-	62257951	62257951	16724991	1	3464,	0,
#Partially deleted in new
chr15	62263243	62266284	chr15:62263243-62266284	4	-	62263243	62263243	16724991	2	481,108,	0,2933,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	62274162	62278358	chr15:62274162-62278358	3	+	62274162	62274162	8553170	3	113,145,193,	0,2228,4003,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	62274854	62278365	chr15:62274854-62278365	1	+	62274854	62274854	8553170	1	3511,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	62284189	62285006	chr15:62284189-62285006	3	+	62284189	62284189	8553170	2	126,466,	0,351,
#Deleted in new
chr15	62304657	62304734	chr15:62304657-62304734	3	-	62304657	62304657	5263520	1	77,	0,
#Deleted in new
chr15	62343028	62343138	chr15:62343028-62343138	3	+	62343028	62343028	5263520	1	110,	0,
#Partially deleted in new
chr15	62362028	62362331	chr15:62362028-62362331	7	-	62362028	62362028	16724991	1	303,	0,
#Partially deleted in new
chr15	62387326	62388875	chr15:62387326-62388875	3	-	62387326	62387326	8553170	1	1549,	0,
#Partially deleted in new
chr15	62390525	62476414	chr15:62390525-62476414	0	+	62390525	62390525	8553170	2	160,89,	0,85800,
#Partially deleted in new
chr15	62453591	62618430	chr15:62453591-62618430	0	+	62453591	62453591	8553170	3	150,76,80,	0,136095,164759,
#Partially deleted in new
chr15	62561364	62844631	chr15:62561364-62844631	3	+	62647310	62840610	789624	58	118,76,172,98,130,153,143,128,64,105,156,102,77,181,114,109,209,99,168,295,167,129,114,114,135,129,103,209,120,198,140,94,90,123,144,162,141,182,133,102,171,147,102,120,147,167,184,126,117,186,108,106,125,126,63,183,126,4150,	0,28322,85910,88719,90640,91797,94579,96406,112462,113852,125276,131475,132951,136323,137389,139741,140627,141401,145721,147137,150546,154966,156211,158402,160988,163611,165722,175513,176849,177983,179265,186986,189037,190940,192408,194167,200316,200907,202198,204956,209599,215399,219775,222406,231276,234762,235854,239003,239288,244235,248560,258151,259121,272139,274372,274526,277491,279117,
#Partially deleted in new
chr15	62589679	62843347	chr15:62589679-62843347	1	+	62589679	62840610	789624	36	83,8,110,129,103,209,120,198,140,94,90,123,144,162,141,182,133,102,171,147,102,120,147,167,184,126,117,186,108,106,125,126,63,183,126,2866,	0,28671,132698,135296,137407,147198,148534,149668,150950,158671,160722,162625,164093,165852,172001,172592,173883,176641,181284,187084,191460,194091,202961,206447,207539,210688,210973,215920,220245,229836,230806,243824,246057,246211,249176,250802,
#Partially deleted in new
chr15	62637171	62645291	chr15:62637171-62645291	3	-	62637171	62637171	5263520	3	1447,203,775,	0,2988,7345,
#Partially deleted in new
chr15	62637635	62645181	chr15:62637635-62645181	0	-	62637635	62637635	8553170	3	983,102,665,	0,2524,6881,
#Partially deleted in new
chr15	62649998	62658174	chr15:62649998-62658174	0	+	62649998	62649998	8553170	5	183,130,153,143,404,	0,2006,3163,5945,7772,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	62682915	62690448	chr15:62682915-62690448	3	-	62682915	62682915	8553170	4	141,123,109,204,	0,1066,4903,7329,
#Partially deleted in new
chr15	62727089	62841349	chr15:62727089-62841349	0	+	62727089	62840610	789624	32	100,209,120,198,140,94,90,123,144,162,141,182,133,102,171,147,102,120,147,167,184,126,117,186,108,106,125,126,63,228,126,868,	0,9788,11124,12258,13540,21261,23312,25215,26683,28442,34591,35182,36473,39231,43874,49674,54050,56681,65551,69037,70129,73278,73563,78510,82835,92426,93396,106414,108647,108801,111766,113392,
#Partially deleted in new
chr15	62733901	62739545	chr15:62733901-62739545	0	+	62733901	62733901	8553170	4	190,209,120,198,	0,2976,4312,5446,
#Partially deleted in new
chr15	62740444	62841486	chr15:62740444-62841486	0	+	62740444	62740444	8553170	27	325,94,90,123,1921,141,182,133,102,171,147,102,120,147,167,184,126,117,186,108,106,125,126,63,183,126,1005,	0,7906,9957,11860,13328,21236,21827,23118,25876,30519,36319,40695,43326,52196,55682,56774,59923,60208,65155,69480,79071,80041,93059,95292,95446,98411,100037,
#Partially deleted in new
chr15	62758589	62784838	chr15:62758589-62784838	1	+	62762313	62783968	789624	9	70,141,182,133,102,171,147,102,1068,	0,3091,3682,4973,7731,12374,18174,22550,25181,
#Partially deleted in new
chr15	62763225	62766359	chr15:62763225-62766359	0	+	62763225	62763225	8553170	2	470,39,	0,3095,
#Deleted in new
chr15	62823956	62824041	chr15:62823956-62824041	3	+	62823956	62823956	5263520	1	85,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	62827674	62835397	chr15:62827674-62835397	1	-	62827674	62827674	8553170	2	7112,315,	0,7408,
#Partially deleted in new
chr15	62834659	62843073	chr15:62834659-62843073	1	-	62834659	62834659	8553170	4	127,95,46,274,	0,423,3450,8140,
#Partially deleted in new
chr15	62835644	62840590	chr15:62835644-62840590	0	+	62835644	62835644	8553170	4	155,183,126,109,	0,246,3211,4837,
#Deleted in new
chr15	62842123	62844581	chr15:62842123-62844581	0	-	62842123	62842123	8553170	2	245,202,	0,2256,
#Partially deleted in new
chr15	62842888	62884034	chr15:62842888-62884034	3	-	62842888	62842888	8553170	4	155,74,264,77,	0,1539,4986,41069,
#Deleted in new
chr15	62895811	62899543	chr15:62895811-62899543	3	+	62895811	62895811	8553170	2	332,893,	0,2839,
#Deleted in new
chr15	62953172	62954124	chr15:62953172-62954124	7	+	62953172	62953172	16724991	1	952,	0,
#Partially deleted in new
chr15	63042631	63066093	chr15:63042631-63066093	1	+	63042829	63064146	0	10	312,126,134,118,71,76,63,70,127,198,	0,1395,14353,16931,18237,18566,19583,19944,21432,23264,
#Partially deleted in new
chr15	63042683	63071323	chr15:63042683-63071323	0	+	63042683	63042683	8553170	7	1148,134,118,71,1080,70,234,	0,14301,16879,18185,18514,19892,28406,
#Partially deleted in new
chr15	63042684	63071889	chr15:63042684-63071889	1	+	63042829	63071172	0	9	259,126,134,118,71,76,63,70,800,	0,1342,14300,16878,18184,18513,19530,19891,28405,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	63042686	63047726	chr15:63042686-63047726	1	+	63042829	63044233	789624	2	257,3700,	0,1340,
#Partially deleted in new
chr15	63042746	63066176	chr15:63042746-63066176	1	+	63042829	63065987	789624	3	197,72,216,	0,1280,23214,
#Partially deleted in new
chr15	63042749	63066013	chr15:63042749-63066013	1	+	63042829	63065899	0	10	194,126,134,118,71,76,63,70,79,118,	0,1277,14235,16813,18119,18963,19465,19826,21314,23146,
#Partially deleted in new
chr15	63042750	63071912	chr15:63042750-63071912	1	+	63042829	63071172	789624	10	193,126,126,134,118,71,76,63,70,823,	0,955,1276,14234,16812,18118,18962,19464,19825,28339,
#Partially deleted in new
chr15	63042750	63061265	chr15:63042750-63061265	0	+	63042750	63042750	8553170	6	193,447,134,118,71,68,	0,955,14234,16812,18118,18447,
#Partially deleted in new
chr15	63042750	63057010	chr15:63042750-63057010	0	+	63042829	63043477	789624	3	193,363,26,	0,718,14234,
#Partially deleted in new
chr15	63042754	63071885	chr15:63042754-63071885	0	+	63042829	63061226	789624	8	189,126,134,71,76,63,70,796,	0,1272,14230,18114,18443,19460,19821,28335,
#Partially deleted in new
chr15	63042757	63071915	chr15:63042757-63071915	1	+	63042829	63071172	0	9	186,126,134,118,71,76,63,70,826,	0,948,14227,16805,18111,18955,19457,19818,28332,
#Partially deleted in new
chr15	63042757	63071222	chr15:63042757-63071222	1	+	63042829	63071172	0	9	186,126,134,118,71,76,63,70,133,	0,1269,14227,16805,18111,18955,19457,19818,28332,
#Partially deleted in new
chr15	63042769	63071190	chr15:63042769-63071190	1	+	63042829	63071172	0	9	174,126,134,118,71,76,63,70,101,	0,936,14215,16793,18099,18428,19445,19806,28320,
#Partially deleted in new
chr15	63042776	63066091	chr15:63042776-63066091	1	+	63042829	63065899	0	10	167,126,134,118,71,76,63,70,79,196,	0,929,14208,16786,18092,18936,19438,19799,21287,23119,
#Partially deleted in new
chr15	63042829	63066093	chr15:63042829-63066093	3	+	63042829	63064146	789624	10	114,126,134,118,71,76,63,70,127,198,	0,1197,14155,16733,18039,18883,19385,19746,21234,23066,
#Partially deleted in new
chr15	63043966	63071779	chr15:63043966-63071779	0	+	63043966	63043966	8553170	9	186,134,118,71,76,76,63,70,1910,	0,13018,15596,16902,17231,17746,18248,18609,25903,
#Partially deleted in new
chr15	63044140	63062598	chr15:63044140-63062598	0	+	63044140	63061730	789624	8	12,134,118,71,76,76,63,23,	0,12844,15422,16728,17057,17572,18074,18435,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	63046033	63049387	chr15:63046033-63049387	3	-	63046033	63046033	8553170	1	3354,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	63047693	63049248	chr15:63047693-63049248	1	-	63047693	63047693	8553170	2	1002,408,	0,1147,
#Partially deleted in new
chr15	63048438	63070632	chr15:63048438-63070632	1	+	63048575	63069943	0	8	269,134,118,71,76,63,70,763,	0,8546,11124,12430,13274,13776,14137,21431,
#Partially deleted in new
chr15	63048470	63071263	chr15:63048470-63071263	1	+	63048575	63071172	789624	8	237,134,118,71,76,63,70,174,	0,8514,11092,12398,12727,13744,14105,22619,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	63048486	63065278	chr15:63048486-63065278	1	+	63048575	63064146	789624	8	221,134,118,71,76,63,70,1215,	0,8498,11076,12382,13226,13728,14089,15577,
#Partially deleted in new
chr15	63048488	63070278	chr15:63048488-63070278	1	+	63048575	63069943	789624	8	219,134,118,71,76,63,70,409,	0,8496,11074,12380,12709,13726,14087,21381,
#Partially deleted in new
chr15	63048499	63071882	chr15:63048499-63071882	0	+	63048575	63059580	789624	7	208,118,71,76,63,70,793,	0,11063,12369,12698,13715,14076,22590,
#Partially deleted in new
chr15	63048536	63061098	chr15:63048536-63061098	0	+	63048536	63048536	8553170	4	171,134,118,230,	0,8448,11026,12332,
#Partially deleted in new
chr15	63048561	63062892	chr15:63048561-63062892	1	+	63048575	63062809	789624	7	146,134,118,71,76,63,317,	0,8423,11001,12307,12636,13653,14014,
#Partially deleted in new
chr15	63048575	63066093	chr15:63048575-63066093	1	+	63048575	63065899	789624	9	132,134,118,71,76,63,70,79,198,	0,8409,10987,12293,13137,13639,14000,15488,17320,
#Partially deleted in new
chr15	63048812	63062277	chr15:63048812-63062277	0	+	63059566	63062277	789624	6	108,134,118,71,76,63,	0,8172,10750,12056,12385,13402,
#Partially deleted in new
chr15	63054448	63059590	chr15:63054448-63059590	0	+	63059566	63059590	789624	3	130,134,28,	0,2536,5114,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	63055728	63071912	chr15:63055728-63071912	0	+	63059566	63061730	789624	8	1390,118,71,76,76,63,70,823,	0,3834,5140,5469,5984,6486,6847,15361,
#Partially deleted in new
chr15	63056860	63059962	chr15:63056860-63059962	0	+	63056860	63056860	8553170	2	258,400,	0,2702,
#Partially deleted in new
chr15	63057005	63066091	chr15:63057005-63066091	0	+	63057005	63061730	789624	7	113,76,76,63,70,79,196,	0,2557,4707,5209,5570,7058,8890,
#Deleted in new
chr15	63061233	63062332	chr15:63061233-63062332	0	+	63061233	63061233	8553170	2	555,118,	0,981,
#Partially deleted in new
chr15	63062056	63071323	chr15:63062056-63071323	0	+	63062056	63062056	8553170	3	221,70,234,	0,519,9033,
#Partially deleted in new
chr15	63062107	63066092	chr15:63062107-63066092	0	+	63062107	63062107	8553170	3	170,70,197,	0,468,3788,
#Partially deleted in new
chr15	63063803	63066093	chr15:63063803-63066093	0	+	63063803	63063803	8553170	2	339,198,	0,2092,
#Deleted in new
chr15	63070024	63071911	chr15:63070024-63071911	3	-	63070024	63070024	8553170	2	437,254,	0,1633,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	63091366	63110589	chr15:63091366-63110589	3	+	63091366	63091366	8553170	4	433,106,153,474,	0,13718,14875,18749,
#Duplicated in new
chr15	63098869	63110403	chr15:63098869-63110403	0	+	63098869	63098869	8553170	4	111,106,153,288,	0,6215,7372,11246,
#Partially deleted in new
chr15	63121799	63142061	chr15:63121799-63142061	3	+	63121871	63141805	789624	6	429,67,191,337,166,782,	0,836,5059,5553,7685,19480,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	63121832	63131471	chr15:63121832-63131471	1	+	63121871	63129654	789624	5	396,67,191,337,1987,	0,803,5026,5520,7652,
#Partially deleted in new
chr15	63122582	63127593	chr15:63122582-63127593	0	+	63126911	63127593	789624	3	120,191,241,	0,4276,4770,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	63125871	63155715	chr15:63125871-63155715	0	-	63125871	63125871	8553170	2	149,95,	0,29749,
#Partially deleted in new
chr15	63129358	63141346	chr15:63129358-63141346	0	+	63129358	63129358	8553170	2	292,67,	0,11921,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	63148249	63157802	chr15:63148249-63157802	3	-	63154031	63157405	789624	4	5811,111,109,403,	0,7371,8163,9150,
#Partially deleted in new
chr15	63153852	63157281	chr15:63153852-63157281	1	-	63154031	63156431	789624	4	208,111,109,495,	0,1768,2560,2934,
#Partially deleted in new
chr15	63153852	63156774	chr15:63153852-63156774	1	-	63154031	63156575	789624	3	208,111,362,	0,1768,2560,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	63153852	63157477	chr15:63153852-63157477	0	-	63153852	63153852	8553170	2	1879,1065,	0,2560,
#Partially deleted in new
chr15	63153852	63157477	chr15:63153852-63157477	1	-	63154031	63156431	789624	5	208,111,109,187,78,	0,1768,2560,2934,3547,
#Partially deleted in new
chr15	63153858	63158021	chr15:63153858-63158021	1	-	63154031	63156431	789624	4	202,111,109,106,	0,1762,2554,4057,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	63154970	63157499	chr15:63154970-63157499	1	-	63155552	63157405	789624	3	761,109,100,	0,1442,2429,
#Partially deleted in new
chr15	63189468	63267782	chr15:63189468-63267782	3	+	63189624	63263619	789624	8	280,61,61,78,90,66,51,4256,	0,55287,60176,66038,67036,70158,73223,74058,
#Partially deleted in new
chr15	63189593	63263679	chr15:63189593-63263679	0	+	63189624	63251316	789624	9	155,61,61,59,78,90,66,51,153,	0,55162,60051,61690,65913,66911,70033,73098,73933,
#Partially deleted in new
chr15	63189602	63263596	chr15:63189602-63263596	0	+	63189624	63223870	789624	9	146,132,61,61,78,90,66,51,70,	0,34245,55153,60042,65904,66902,70024,73089,73924,
#Partially deleted in new
chr15	63189605	63262776	chr15:63189605-63262776	0	+	63189624	63262776	789624	7	143,61,61,78,90,66,85,	0,55150,60039,65901,66899,70021,73086,
#Partially deleted in new
chr15	63276017	63305735	chr15:63276017-63305735	0	+	63279209	63305735	789624	6	143,171,71,123,128,122,	0,3143,10540,11406,26327,29596,
#Deleted in new
chr15	63276033	63276852	chr15:63276033-63276852	0	+	63276033	63276033	8553170	2	229,227,	0,592,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	63277553	63309126	chr15:63277553-63309126	3	+	63277623	63305781	789624	6	183,171,71,123,128,3513,	0,1607,9004,9870,24791,28060,
#Partially deleted in new
chr15	63277609	63305801	chr15:63277609-63305801	0	+	63277623	63279229	789624	7	127,64,171,71,123,128,188,	0,681,1551,8948,9814,24735,28004,
#Partially deleted in new
chr15	63277609	63305801	chr15:63277609-63305801	1	+	63277623	63305781	789624	5	127,171,71,128,188,	0,1551,8948,24735,28004,
#Partially deleted in new
chr15	63277617	63305801	chr15:63277617-63305801	0	+	63277623	63305801	789624	5	119,171,71,123,188,	0,1543,8940,9806,27996,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	63277680	63306326	chr15:63277680-63306326	0	+	63277680	63277740	789624	6	249,171,71,123,128,713,	0,1480,8877,9743,24664,27933,
#Partially deleted in new
chr15	63287180	63302493	chr15:63287180-63302493	0	+	63287180	63287180	8553170	2	366,149,	0,15164,
#Partially deleted in new
chr15	63287215	63305910	chr15:63287215-63305910	0	+	63287215	63287215	8553170	2	170,206,	0,18489,
#Partially deleted in new
chr15	63291685	63305904	chr15:63291685-63305904	0	+	63291685	63291685	8553170	3	312,128,291,	0,10659,13928,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	63321377	63382161	chr15:63321377-63382161	3	-	63326284	63381720	0	11	4980,85,33,127,158,64,96,143,180,21,526,	0,5771,6720,17441,18910,19342,20624,24099,25152,54280,60258,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	63324687	63381835	chr15:63324687-63381835	1	-	63326284	63381720	0	10	1670,85,127,158,64,96,143,180,21,200,	0,2461,14131,15600,16032,17314,20789,21842,50970,56948,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	63324706	63381846	chr15:63324706-63381846	1	-	63326284	63381720	789624	9	1651,85,127,158,64,96,143,21,211,	0,2442,14112,15581,16013,17295,20770,50951,56929,
#Partially deleted in new
chr15	63325979	63331813	chr15:63325979-63331813	0	-	63325979	63325979	8553170	3	378,85,117,	0,1169,5717,
#Partially deleted in new
chr15	63340021	63342074	chr15:63340021-63342074	0	-	63340021	63340021	8553170	3	424,64,73,	0,698,1980,
#Partially deleted in new
chr15	63375459	63379073	chr15:63375459-63379073	0	-	63375459	63375459	8553170	2	219,319,	0,3295,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	63390135	63432177	chr15:63390135-63432177	0	+	63390135	63390135	8553170	6	126,61,81,81,286,26,	0,4715,5465,8251,40921,42016,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	63390229	63438320	chr15:63390229-63438320	3	+	63390229	63390229	789624	7	32,61,81,81,138,237,1358,	0,4621,5371,8157,40975,41922,46733,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	63456293	63469351	chr15:63456293-63469351	3	-	63456293	63456293	8553170	3	524,45,46,	0,12865,13012,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	63500736	63503083	chr15:63500736-63503083	3	-	63500736	63500736	8553170	1	2347,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr15	63504510	63594640	chr15:63504510-63594640	1	+	63504739	63590826	789624	14	320,61,84,82,83,114,114,147,107,81,119,114,68,3980,	0,28136,49204,52156,53595,55346,58384,65922,69535,69812,83794,84191,84433,86150,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	63504593	63553733	chr15:63504593-63553733	0	+	63504739	63553733	789624	5	237,93,61,132,19,	0,25904,28053,32431,49121,
#Partially deleted in new
chr15	63504594	63558187	chr15:63504594-63558187	0	+	63504739	63558187	789624	5	236,61,84,82,82,	0,28052,49120,52072,53511,
#Partially deleted in new
chr15	63504610	63591467	chr15:63504610-63591467	3	+	63504739	63590826	789624	15	220,61,132,84,82,83,114,114,147,107,81,119,114,68,807,	0,28036,32414,49104,52056,53495,55246,58284,65822,69435,69712,83694,84091,84333,86050,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	63504611	63559884	chr15:63504611-63559884	0	+	63504739	63529093	789624	9	219,153,61,116,132,84,82,83,28,	0,24402,28035,29191,32413,49103,52055,53494,55245,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr15	63504634	63591444	chr15:63504634-63591444	0	+	63504739	63529093	789624	16	196,153,61,132,84,82,83,114,114,147,107,81,119,114,68,784,	0,24379,28012,32390,49080,52032,53471,55222,58260,65798,69411,69688,83670,84067,84309,86026,
#Partially deleted in new
chr15	63504655	63574152	chr15:63504655-63574152	0	+	63504655	63504655	8553170	4	175,114,147,107,	0,58239,65777,69390,
#Partially deleted in new
chr15	63504673	63588396	chr15:63504673-63588396	0	+	63504739	63574047	789624	5	157,147,107,81,92,	0,65759,69372,69649,83631,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr15	63504733	63594640	chr15:63504733-63594640	0	+	63504739	63533818	789624	16	97,61,116,132,84,82,83,114,114,147,107,81,119,114,68,3980,	0,27913,29069,32291,48981,51933,53372,55123,58161,65699,69312,69589,83571,83968,84210,85927,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	63515445	63556742	chr15:63515445-63556742	0	+	63529141	63556742	789624	6	55,153,61,132,84,76,	0,13568,17201,21579,38269,41221,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	63527832	63537056	chr15:63527832-63537056	0	+	63529141	63537056	789624	4	308,153,61,32,	0,1181,4814,9192,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr15	63529141	63594640	chr15:63529141-63594640	1	+	63529141	63590826	789624	15	25,61,132,84,82,83,114,114,147,107,81,119,114,68,3980,	0,3505,7883,24573,27525,28964,30715,33753,41291,44904,45181,59163,59560,59802,61519,
#Partially deleted in new
chr15	63532505	63590955	chr15:63532505-63590955	1	+	63532606	63590826	789624	14	202,132,84,82,83,114,114,147,107,81,119,114,68,295,	0,4519,21209,24161,25600,27351,30389,37927,41540,41817,55799,56196,56438,58155,
#Partially deleted in new
chr15	63537104	63594633	chr15:63537104-63594633	0	+	63537104	63590826	789624	15	52,84,82,83,114,114,147,107,81,119,114,68,713,134,205,	0,16610,19562,21001,22752,25790,33328,36941,37218,51200,51597,51839,53556,56677,57324,
#Partially deleted in new
chr15	63537137	63591467	chr15:63537137-63591467	0	+	63537137	63542055	8553170	14	19,138,84,82,83,114,114,147,107,81,119,114,68,807,	0,4917,16577,19529,20968,22719,25757,33295,36908,37185,51167,51564,51806,53523,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	63544246	63589055	chr15:63544246-63589055	1	-	63544246	63544246	8553170	4	133,48,47,227,	0,7048,7583,44582,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	63544246	63589054	chr15:63544246-63589054	0	-	63544246	63544246	8553170	3	133,48,226,	0,7048,44582,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	63544288	63556470	chr15:63544288-63556470	0	-	63544288	63544288	8553170	4	91,48,47,180,	0,7006,7541,12002,
#Partially deleted in new
chr15	63544624	63591136	chr15:63544624-63591136	1	+	63544711	63590826	789624	13	104,84,82,83,114,114,147,107,81,119,114,68,476,	0,9090,12042,13481,15232,18270,25808,29421,29698,43680,44077,44319,46036,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	63552911	63600752	chr15:63552911-63600752	3	-	63552911	63552911	8553170	5	3697,148,272,92,164,	0,3920,35917,41783,47677,
#Partially deleted in new
chr15	63553332	63556701	chr15:63553332-63556701	0	+	63553332	63553332	8553170	2	466,35,	0,3334,
#Partially deleted in new
chr15	63556641	63594704	chr15:63556641-63594704	0	-	63556641	63556641	8553170	3	338,272,10,	0,32187,38053,
#Partially deleted in new
chr15	63586607	63590925	chr15:63586607-63590925	0	+	63586607	63586607	8553170	5	151,119,114,68,265,	0,1697,2094,2336,4053,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	63587709	63600760	chr15:63587709-63600760	1	-	63587709	63587709	8553170	4	1391,129,92,172,	0,6039,6985,12879,
#Partially deleted in new
chr15	63587925	63600755	chr15:63587925-63600755	0	-	63587925	63587925	789624	3	1175,92,167,	0,6769,12663,
#Partially deleted in new
chr15	63587933	63600809	chr15:63587933-63600809	0	-	63587933	63587933	8553170	3	1167,92,548,	0,6761,12328,
#Deleted in new
chr15	63587969	63591003	chr15:63587969-63591003	0	+	63587969	63587969	8553170	4	454,114,68,343,	0,732,974,2691,
#Deleted in new
chr15	63588519	63591053	chr15:63588519-63591053	0	+	63588519	63588519	8553170	3	296,68,393,	0,424,2141,
#Partially deleted in new
chr15	63588728	63594594	chr15:63588728-63594594	0	+	63588728	63590826	789624	4	87,68,713,813,	0,215,1932,5053,
#Partially deleted in new
chr15	63588962	63601589	chr15:63588962-63601589	0	-	63588962	63588962	8553170	3	138,92,332,	0,5732,12295,
#Partially deleted in new
chr15	63591070	63600739	chr15:63591070-63600739	0	-	63591070	63591070	8553170	3	265,92,151,	0,3624,9518,
#Partially deleted in new
chr15	63591185	63600797	chr15:63591185-63600797	0	-	63591185	63591185	8553170	4	150,92,121,209,	0,3509,7997,9403,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	63597352	63602428	chr15:63597352-63602428	3	+	63597392	63601686	789624	2	393,1133,	0,3943,
#Partially deleted in new
chr15	63597384	63601064	chr15:63597384-63601064	1	+	63597392	63601039	789624	2	361,368,	0,3312,
#Partially deleted in new
chr15	63597390	63601241	chr15:63597390-63601241	1	+	63597392	63599193	789624	2	355,2088,	0,1763,
#Partially deleted in new
chr15	63597701	63601605	chr15:63597701-63601605	0	+	63597701	63599193	789624	3	44,43,310,	0,1452,3594,
#Partially deleted in new
chr15	63608617	63833888	chr15:63608617-63833888	3	-	63609080	63775623	0	78	649,306,153,253,77,166,170,170,139,170,103,123,156,182,139,126,66,294,174,102,147,106,200,131,201,128,128,206,214,271,175,201,53,269,221,125,232,117,161,199,776,521,84,240,177,111,107,156,194,238,121,216,269,52,121,313,172,121,115,174,222,192,133,153,222,126,166,135,172,145,128,144,97,312,195,96,956,62,	0,3633,7150,7812,14197,15107,15540,17367,20059,21848,24091,25230,26115,27343,28887,29793,30093,31534,32852,34339,34786,36374,36865,39451,41107,42635,43796,45501,47124,47470,49926,51118,52355,53135,54366,55852,57301,57738,60920,63878,65724,69227,71459,71919,77741,80971,81923,83793,85346,85694,86156,87506,90110,98162,104157,104735,107684,109956,110165,114564,116674,119029,120618,120879,124306,126106,138300,139106,140749,141029,144340,145887,146611,147819,149557,155478,166076,225209,
#Deleted in new
chr15	63615780	63616732	chr15:63615780-63616732	0	-	63615780	63615780	8553170	2	140,303,	0,649,
#Partially deleted in new
chr15	63622837	63630551	chr15:63622837-63630551	0	-	63624307	63630551	789624	6	54,166,170,213,139,86,	0,887,1320,3104,5839,7628,
#Partially deleted in new
chr15	63624280	63630697	chr15:63624280-63630697	0	-	63624280	63624280	8553170	4	47,170,139,232,	0,1704,4396,6185,
#Partially deleted in new
chr15	63630519	63634941	chr15:63630519-63634941	0	-	63630519	63630519	8553170	4	116,103,123,209,	0,2189,3328,4213,
#Partially deleted in new
chr15	63630531	63633876	chr15:63630531-63633876	0	-	63632594	63633876	789624	4	104,315,103,29,	0,1759,2177,3316,
#Partially deleted in new
chr15	63633962	63637550	chr15:63633962-63637550	0	-	63637099	63637550	789624	5	8,156,182,147,46,	0,770,1998,3025,3542,
#Partially deleted in new
chr15	63674740	63677986	chr15:63674740-63677986	0	-	63674740	63677986	789624	2	353,142,	0,3104,
#Partially deleted in new
chr15	63675145	63713758	chr15:63675145-63713758	3	+	63675145	63675145	8553170	4	30,160,97,293,	0,2739,3077,38320,
#Partially deleted in new
chr15	63696123	63833942	chr15:63696123-63833942	0	-	63696123	63775623	789624	8	216,269,52,121,313,172,956,116,	0,2604,10656,16651,17229,20178,78570,137703,
#Partially deleted in new
chr15	63718428	63723257	chr15:63718428-63723257	0	-	63718428	63718428	8553170	3	266,115,76,	0,354,4753,
#Partially deleted in new
chr15	63734642	63749449	chr15:63734642-63749449	0	-	63734642	63734642	8553170	4	207,166,135,83,	0,12275,13081,14724,
#Partially deleted in new
chr15	63752514	63833917	chr15:63752514-63833917	0	-	63752514	63752514	8553170	8	571,144,97,312,195,96,956,91,	0,1990,2714,3922,5660,11581,22179,81312,
#Partially deleted in new
chr15	63775164	63833917	chr15:63775164-63833917	0	-	63775164	63775623	789624	2	485,96,	0,58657,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	63775563	63833885	chr15:63775563-63833885	0	-	63775563	63775623	789624	3	86,427,64,	0,4019,58258,
#Deleted in new
chr15	63870929	63871019	chr15:63870929-63871019	3	-	63870929	63870929	5263520	1	90,	0,
#Deleted in new
chr15	63890029	63890317	chr15:63890029-63890317	7	+	63890029	63890029	16724991	1	288,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	63907035	64040267	chr15:63907035-64040267	1	-	63908519	64040261	0	11	1565,84,90,46,153,27,49,130,139,222,98,	0,4872,5072,17780,18905,22515,23371,32196,64387,76497,133134,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	63907035	64040267	chr15:63907035-64040267	0	-	63971507	64040261	789624	12	2506,98,1369,90,46,153,27,49,130,139,130,98,	0,2641,3587,5072,17780,18905,22515,23371,32196,64387,76589,133134,
#Partially deleted in new
chr15	63907922	64046322	chr15:63907922-64046322	3	-	63908519	64040261	0	12	678,84,90,46,153,27,49,130,139,222,98,25,	0,3985,4185,16893,18018,21628,22484,31309,63500,75610,132247,138375,
#Partially deleted in new
chr15	63908252	63916592	chr15:63908252-63916592	0	-	63908252	63908252	8553170	4	348,84,90,17,	0,3655,3855,8323,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	63909183	63911943	chr15:63909183-63911943	0	-	63911105	63911943	789624	3	31,517,36,	0,1516,2724,
#Partially deleted in new
chr15	63911851	63926201	chr15:63911851-63926201	0	-	63911851	63911851	8553170	4	140,90,46,261,	0,256,12964,14089,
#Duplicated in new
chr15	63916146	64046322	chr15:63916146-64046322	1	-	63922734	64040261	0	10	7197,46,153,27,49,130,139,222,98,25,	0,8669,9794,13404,14260,23085,55276,67386,124023,130151,
#Partially deleted in new
chr15	63922734	64040267	chr15:63922734-64040267	1	-	63922734	64040261	0	9	609,46,153,27,49,130,139,222,98,	0,2081,3206,6816,7672,16497,48688,60798,117435,
#Partially deleted in new
chr15	63924511	63926074	chr15:63924511-63926074	0	-	63924511	63924511	8553170	2	350,134,	0,1429,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	63928273	63935953	chr15:63928273-63935953	3	+	63928273	63928273	789624	4	215,328,116,413,	0,1237,4288,7267,
#Partially deleted in new
chr15	63929550	64046436	chr15:63929550-64046436	0	-	63929550	63929550	8553170	8	27,105,49,130,139,222,98,139,	0,123,856,9681,41872,53982,110619,116747,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	63939292	64030020	chr15:63939292-64030020	0	-	63939292	63939292	8553170	4	69,139,130,232,	0,32130,44332,90496,
#Partially deleted in new
chr15	63971523	64046381	chr15:63971523-64046381	0	-	63983703	64040261	789624	5	38,222,124,98,84,	0,12009,19704,68646,74774,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	63983604	64072033	chr15:63983604-64072033	0	-	63983604	64040261	789624	5	150,98,159,212,105,	0,56565,79555,80631,88324,
#Partially deleted in new
chr15	64072558	64094018	chr15:64072558-64094018	3	-	64072930	64093768	0	5	470,46,50,165,374,	0,2933,8543,16128,21086,
#Partially deleted in new
chr15	64072577	64093808	chr15:64072577-64093808	1	-	64075517	64093768	0	4	451,46,165,164,	0,2914,16109,21067,
#Partially deleted in new
chr15	64074317	64093795	chr15:64074317-64093795	1	-	64075517	64093768	0	3	1220,165,151,	0,14369,19327,
#Partially deleted in new
chr15	64075404	64093857	chr15:64075404-64093857	1	-	64075483	64093768	789624	4	133,50,165,213,	0,5697,13282,18240,
#Partially deleted in new
chr15	64094122	64138006	chr15:64094122-64138006	3	+	64127175	64137618	789624	14	213,112,128,67,44,79,76,114,94,206,144,81,72,439,	0,18450,23994,24665,29380,33051,33608,35793,36105,37564,40541,42207,42738,43445,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr15	64095990	64144231	chr15:64095990-64144231	0	+	64096013	64118240	789624	15	182,112,42,67,44,142,79,76,114,94,206,144,81,72,6664,	0,16582,22212,22797,27512,30088,31183,31740,33925,34237,35696,38673,40339,40870,41577,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr15	64095992	64139875	chr15:64095992-64139875	1	+	64096013	64138197	0	15	180,112,128,67,44,142,79,76,114,94,206,144,81,72,1834,	0,16580,22124,22795,27510,30086,31181,31738,33923,34235,35694,38671,40337,40868,42049,
#Partially deleted in new
chr15	64095999	64138006	chr15:64095999-64138006	1	+	64096013	64137618	0	15	173,112,128,67,44,142,79,76,114,94,206,144,81,72,439,	0,16573,22117,22788,27503,30079,31174,31731,33916,34228,35687,38664,40330,40861,41568,
#Partially deleted in new
chr15	64096003	64134954	chr15:64096003-64134954	0	+	64096013	64126131	789624	9	169,112,142,79,76,157,94,206,291,	0,16569,30075,31170,31727,33869,34224,35683,38660,
#Partially deleted in new
chr15	64096013	64137618	chr15:64096013-64137618	1	+	64096013	64137618	0	13	159,112,44,142,79,76,114,94,206,144,81,72,51,	0,16559,27489,30065,31160,31717,33902,34214,35673,38650,40316,40847,41554,
#Partially deleted in new
chr15	64096013	64126131	chr15:64096013-64126131	1	+	64096013	64126131	789624	3	159,112,53,	0,16559,30065,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	64096025	64146090	chr15:64096025-64146090	0	+	64096025	64145703	789624	4	147,112,50,465,	0,16547,22091,49600,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	64111457	64111569	chr15:64111457-64111569	3	-	64111457	64111457	8553170	1	112,	0,
#Partially deleted in new
chr15	64131622	64134801	chr15:64131622-64134801	0	+	64131622	64131622	8553170	2	270,138,	0,3041,
#Deleted in new
chr15	64131828	64132376	chr15:64131828-64132376	0	+	64131828	64131828	8553170	2	64,37,	0,511,
#Partially deleted in new
chr15	64134175	64136409	chr15:64134175-64136409	0	+	64134175	64134175	8553170	2	632,80,	0,2154,
#Partially deleted in new
chr15	64136329	64143308	chr15:64136329-64143308	0	+	64136329	64142671	789624	4	81,72,56,641,	0,531,1712,6338,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	64151714	64157481	chr15:64151714-64157481	0	+	64151714	64151714	8553170	6	136,105,95,33,969,2375,	0,923,1530,1937,2220,3392,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	64151716	64157481	chr15:64151716-64157481	3	+	64151775	64154508	0	7	134,84,105,95,33,68,3095,	0,526,921,1528,1935,2218,2670,
#Partially deleted in new
chr15	64151738	64155833	chr15:64151738-64155833	0	+	64151775	64153343	0	8	112,84,105,142,33,68,366,443,	0,504,899,1506,1913,2196,2648,3652,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	64151738	64154919	chr15:64151738-64154919	0	+	64151738	64151738	8553170	2	112,2677,	0,504,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	64151740	64154762	chr15:64151740-64154762	0	+	64151740	64151740	8553170	6	110,500,95,33,68,376,	0,502,1504,1911,2194,2646,
#Partially deleted in new
chr15	64151743	64154614	chr15:64151743-64154614	0	+	64151743	64151743	8553170	4	999,95,33,680,	0,1501,1908,2191,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	64153479	64157480	chr15:64153479-64157480	0	+	64153479	64153479	8553170	3	205,68,3094,	0,455,907,
#Partially deleted in new
chr15	64155811	64163205	chr15:64155811-64163205	3	-	64156022	64162986	0	5	334,185,94,114,354,	0,913,4292,6229,7040,
#Partially deleted in new
chr15	64156777	64163006	chr15:64156777-64163006	0	-	64156777	64156777	8553170	3	132,94,155,	0,3326,6074,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	64159273	64163021	chr15:64159273-64163021	0	-	64159273	64159273	8553170	3	924,114,170,	0,2767,3578,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	64165516	64356259	chr15:64165516-64356259	1	-	64171930	64300499	0	12	6469,107,108,149,85,86,235,152,70,41,405,272,	0,14831,37565,38924,39348,41992,48373,51045,85995,93684,134802,190471,
#Partially deleted in new
chr15	64165732	64356173	chr15:64165732-64356173	1	-	64165977	64300499	789624	13	348,107,111,108,149,85,86,235,152,70,41,405,186,	0,14615,22642,37349,38708,39132,41776,48157,50829,85779,93468,134586,190255,
#Partially deleted in new
chr15	64165736	64300697	chr15:64165736-64300697	1	-	64165977	64300499	789624	11	344,107,108,149,85,86,235,152,70,41,379,	0,14611,37345,38704,39128,41772,48153,50825,85775,93464,134582,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	64167899	64300723	chr15:64167899-64300723	1	-	64171930	64300499	789624	12	4086,24,107,108,149,85,86,235,152,70,41,405,	0,8362,12448,35182,36541,36965,39609,45990,48662,83612,91301,132419,
#Partially deleted in new
chr15	64171133	64356071	chr15:64171133-64356071	1	-	64171930	64300499	789624	13	852,107,111,108,149,85,86,235,152,70,41,405,84,	0,9214,17241,31948,33307,33731,36375,42756,45428,80378,88067,129185,184854,
#Partially deleted in new
chr15	64171136	64356132	chr15:64171136-64356132	3	-	64171930	64300499	789624	14	849,107,111,108,149,85,86,235,152,70,41,405,49,145,	0,9211,17238,31945,33304,33728,36372,42753,45425,80375,88064,129182,144566,184851,
#Partially deleted in new
chr15	64171628	64300627	chr15:64171628-64300627	0	-	64189405	64300499	0	13	357,107,111,140,108,149,85,86,235,152,70,41,309,	0,8719,16746,17712,31453,32812,33236,35880,42261,44933,79883,87572,128690,
#Partially deleted in new
chr15	64171833	64204925	chr15:64171833-64204925	0	-	64171930	64204925	789624	7	152,24,107,111,108,149,61,	0,4428,8514,16541,31248,32607,33031,
#Partially deleted in new
chr15	64180069	64204548	chr15:64180069-64204548	0	-	64180193	64204548	789624	3	385,108,108,	0,23012,24371,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	64181175	64348382	chr15:64181175-64348382	1	-	64181268	64300499	789624	12	255,108,149,85,86,235,152,70,41,405,49,23,	0,21906,23265,23689,26333,32714,35386,70336,78025,119143,134527,167184,
#Partially deleted in new
chr15	64181175	64204581	chr15:64181175-64204581	0	-	64181268	64204581	789624	4	255,111,108,141,	0,7199,21906,23265,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr15	64181179	64373769	chr15:64181179-64373769	0	-	64181179	64181179	8553170	13	251,108,149,85,86,262,152,70,41,149,405,143,72,	0,21902,23261,23685,26329,32710,35382,70332,78021,84586,119139,161363,192518,
#Partially deleted in new
chr15	64181184	64373769	chr15:64181184-64373769	0	-	64181184	64181184	8553170	12	246,172,108,149,85,86,235,152,70,41,405,72,	0,553,21897,23256,23680,26324,32705,35377,70327,78016,119134,192513,
#Partially deleted in new
chr15	64193943	64203179	chr15:64193943-64203179	0	-	64194296	64203179	789624	2	365,98,	0,9138,
#Partially deleted in new
chr15	64193943	64204503	chr15:64193943-64204503	0	-	64195046	64204503	789624	4	365,64,108,63,	0,1072,9138,10497,
#Partially deleted in new
chr15	64207537	64300632	chr15:64207537-64300632	0	-	64216590	64300499	789624	5	57,235,152,41,314,	0,6352,9024,51663,92781,
#Partially deleted in new
chr15	64214082	64356132	chr15:64214082-64356132	0	-	64251528	64300499	789624	5	42,152,70,405,145,	0,2479,37429,86236,141905,
#Partially deleted in new
chr15	64214098	64381420	chr15:64214098-64381420	3	-	64300662	64381371	789624	8	26,152,70,41,405,163,81,95,	0,2463,37413,45102,86220,162644,166859,167227,
#Partially deleted in new
chr15	64251438	64300467	chr15:64251438-64300467	0	-	64251438	64251438	8553170	3	143,41,149,	0,7762,48880,
#Partially deleted in new
chr15	64251521	64373781	chr15:64251521-64373781	0	-	64251521	64251521	8553170	5	60,41,405,102,84,	0,7679,48797,114452,122176,
#Partially deleted in new
chr15	64251529	64381416	chr15:64251529-64381416	0	-	64300703	64381371	789624	5	52,41,405,81,91,	0,7671,48789,129428,129796,
#Partially deleted in new
chr15	64251544	64381416	chr15:64251544-64381416	0	-	64251544	64251544	8553170	4	37,163,81,91,	0,125198,129413,129781,
#Partially deleted in new
chr15	64251544	64381416	chr15:64251544-64381416	0	-	64366029	64381371	8553170	7	37,41,405,102,163,81,91,	0,7656,48774,114429,125198,129413,129781,
#Partially deleted in new
chr15	64251544	64381416	chr15:64251544-64381416	0	-	64366004	64381371	8553170	6	37,41,405,102,81,91,	0,7656,48774,114429,129413,129781,
#Partially deleted in new
chr15	64259150	64381416	chr15:64259150-64381416	0	-	64259150	64259150	8553170	4	91,405,81,91,	0,41168,121807,122175,
#Partially deleted in new
chr15	64259200	64373769	chr15:64259200-64373769	0	-	64259200	64259200	8553170	4	41,405,102,275,	0,41118,106773,114294,
#Partially deleted in new
chr15	64259213	64373769	chr15:64259213-64373769	0	-	64259213	64259213	8553170	4	28,405,90,72,	0,41105,106772,114484,
#Partially deleted in new
chr15	64300321	64373768	chr15:64300321-64373768	0	-	64300321	64300321	8553170	4	402,143,90,71,	0,42221,65664,73376,
#Partially deleted in new
chr15	64300377	64373411	chr15:64300377-64373411	0	-	64300377	64300377	8553170	5	346,77,143,102,256,	0,35407,42165,65596,72778,
#Partially deleted in new
chr15	64300441	64381440	chr15:64300441-64381440	0	-	64300441	64300441	8553170	4	282,90,81,115,	0,65544,80516,80884,
#Partially deleted in new
chr15	64300606	64373764	chr15:64300606-64373764	0	-	64373706	64373764	789624	2	117,609,	0,72549,
#Deleted in new
chr15	64342538	64342698	chr15:64342538-64342698	3	+	64342538	64342538	8553170	1	160,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	64364310	64381510	chr15:64364310-64381510	3	-	64366029	64381371	0	4	1765,163,81,185,	0,12432,16647,17015,
#Partially deleted in new
chr15	64365364	64381444	chr15:64365364-64381444	1	-	64366004	64381371	0	3	711,81,119,	0,15593,15961,
#Partially deleted in new
chr15	64365605	64381441	chr15:64365605-64381441	1	-	64366029	64381371	789624	3	470,163,116,	0,11137,15720,
#Partially deleted in new
chr15	64365733	64381438	chr15:64365733-64381438	1	-	64373706	64381371	789624	5	342,67,163,81,113,	0,7964,11009,15224,15592,
#Partially deleted in new
chr15	64365747	64381155	chr15:64365747-64381155	0	-	64365747	64365747	8553170	3	328,163,198,	0,10995,15210,
#Partially deleted in new
chr15	64365867	64387684	chr15:64365867-64387684	0	-	64365867	64365867	789624	4	208,163,81,238,	0,10875,15090,21579,
#Partially deleted in new
chr15	64365943	64373771	chr15:64365943-64373771	0	-	64365943	64365943	8553170	2	132,616,	0,7212,
#Partially deleted in new
chr15	64373706	64381510	chr15:64373706-64381510	1	-	64373706	64381371	789624	4	58,163,81,185,	0,3036,7251,7619,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	64382424	64387687	chr15:64382424-64387687	0	-	64382424	64382424	8553170	2	566,241,	0,5022,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	64387747	64397760	chr15:64387747-64397760	0	+	64387747	64387747	8553170	5	41,136,170,134,155,	0,5593,6198,7650,9858,
#Partially deleted in new
chr15	64387752	64409802	chr15:64387752-64409802	0	+	64387752	64387752	8553170	6	36,109,134,213,79,190,	0,6254,7645,9853,12990,21860,
#Partially deleted in new
chr15	64387803	64455303	chr15:64387803-64455303	3	+	64387863	64455064	0	13	161,170,134,213,79,130,216,127,188,125,92,103,307,	0,6142,7594,9802,12939,18526,21809,26281,30737,36227,37736,57202,67193,
#Partially deleted in new
chr15	64387835	64397735	chr15:64387835-64397735	0	+	64387835	64387835	8553170	4	213,109,134,130,	0,6171,7562,9770,
#Partially deleted in new
chr15	64387854	64409684	chr15:64387854-64409684	0	+	64387863	64394037	789624	7	110,109,134,213,79,130,72,	0,6152,7543,9751,12888,18475,21758,
#Partially deleted in new
chr15	64387858	64424330	chr15:64387858-64424330	0	+	64387863	64418604	789624	9	106,170,134,213,79,130,216,188,300,	0,6087,7539,9747,12884,18471,21754,30682,36172,
#Partially deleted in new
chr15	64387861	64400821	chr15:64387861-64400821	0	+	64387863	64397715	789624	4	103,170,213,79,	0,6084,9744,12881,
#Partially deleted in new
chr15	64393695	64409805	chr15:64393695-64409805	0	+	64393695	64393695	8553170	5	420,134,213,79,193,	0,1702,3910,7047,15917,
#Partially deleted in new
chr15	64409717	64455303	chr15:64409717-64455303	0	+	64409717	64445078	789624	3	111,103,307,	0,35288,45279,
#Partially deleted in new
chr15	64424114	64450986	chr15:64424114-64450986	0	+	64424114	64450762	789624	4	41,92,103,322,	0,1425,20891,26550,
#Partially deleted in new
chr15	64444658	64455236	chr15:64444658-64455236	0	+	64444658	64444658	8553170	3	82,103,240,	0,347,10338,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	64445129	64445243	chr15:64445129-64445243	3	-	64445129	64445129	8553170	1	114,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	64460741	64503058	chr15:64460741-64503058	1	+	64499419	64500415	789624	2	97,3766,	0,38551,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	64470252	64471364	chr15:64470252-64471364	3	+	64470252	64470252	8553170	2	330,61,	0,1051,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	64499291	64686068	chr15:64499291-64686068	3	+	64499419	64681382	789624	9	875,226,88,2341,367,176,217,79,4377,	0,123535,171054,174624,178824,180893,181354,182017,182400,
#Partially deleted in new
chr15	64502377	64670433	chr15:64502377-64670433	0	+	64502377	64502377	8553170	3	104,226,88,	0,120449,167968,
#Partially deleted in new
chr15	64528666	64529671	chr15:64528666-64529671	7	-	64528666	64528666	16724991	1	1005,	0,
#Deleted in new
chr15	64592978	64593326	chr15:64592978-64593326	7	+	64592978	64592978	16724991	1	348,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	64631108	64631914	chr15:64631108-64631914	7	-	64631108	64631108	16724991	2	413,72,	0,734,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	64643769	64674771	chr15:64643769-64674771	0	+	64643769	64643769	8553170	4	33,344,88,856,	0,10289,26576,30146,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	64652887	64652989	chr15:64652887-64652989	3	+	64652887	64652887	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	64671262	64671369	chr15:64671262-64671369	3	+	64671262	64671262	8553170	1	107,	0,
#Partially deleted in new
chr15	64687572	64703281	chr15:64687572-64703281	3	-	64688703	64703048	789624	6	1262,86,176,81,76,253,	0,1511,2801,3861,3943,15456,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	64687575	64696303	chr15:64687575-64696303	0	-	64687575	64687575	8553170	4	1259,86,176,5581,	0,1508,2798,3147,
#Partially deleted in new
chr15	64687603	64703208	chr15:64687603-64703208	1	-	64688797	64703048	789624	5	1231,176,81,76,180,	0,2770,3830,3912,15425,
#Partially deleted in new
chr15	64688484	64703201	chr15:64688484-64703201	1	-	64688703	64689135	789624	4	350,86,176,173,	0,599,1889,14544,
#Partially deleted in new
chr15	64690166	64703194	chr15:64690166-64703194	0	-	64690166	64690166	8553170	3	383,158,166,	0,1267,12862,
#Partially deleted in new
chr15	64690419	64703215	chr15:64690419-64703215	0	-	64690419	64703048	789624	5	130,102,81,76,187,	0,488,1014,1096,12609,
#Partially deleted in new
chr15	64690444	64703218	chr15:64690444-64703218	0	-	64690444	64690444	8553170	4	105,158,87,190,	0,989,5519,12584,
#Partially deleted in new
chr15	64690460	64703215	chr15:64690460-64703215	0	-	64690460	64690460	8553170	4	89,158,107,187,	0,973,2614,12568,
#Partially deleted in new
chr15	64691433	64700590	chr15:64691433-64700590	0	-	64691433	64691433	8553170	2	158,106,	0,9051,
#Deleted in new
chr15	64695040	64695594	chr15:64695040-64695594	3	+	64695040	64695040	8553170	1	554,	0,
#Deleted in new
chr15	64696621	64696861	chr15:64696621-64696861	3	+	64696621	64696621	8553170	1	240,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	64701247	64719602	chr15:64701247-64719602	3	+	64701247	64701247	8553170	2	72,1537,	0,16818,
#Partially deleted in new
chr15	64739891	64761217	chr15:64739891-64761217	1	-	64741179	64749084	0	8	1109,70,149,151,63,39,78,87,	0,1281,8527,9108,9539,10451,11669,21239,
#Partially deleted in new
chr15	64739897	64775587	chr15:64739897-64775587	3	-	64741179	64775319	0	8	1103,70,149,151,63,39,78,355,	0,1275,8521,9102,9533,10445,11663,35335,
#Deleted in new
chr15	64762386	64762515	chr15:64762386-64762515	3	-	64762386	64762386	5263520	1	129,	0,
#Partially deleted in new
chr15	64815631	64825668	chr15:64815631-64825668	3	-	64816297	64824335	0	13	726,192,146,88,107,140,107,115,154,126,133,577,76,	0,942,2314,2625,3485,4215,5350,5535,5735,6634,6846,8146,9961,
#Partially deleted in new
chr15	64815631	64825668	chr15:64815631-64825668	1	-	64815690	64824335	0	13	317,192,146,88,107,140,107,115,154,126,133,577,76,	0,942,2314,2625,3485,4215,5350,5535,5735,6634,6846,8146,9961,
#Partially deleted in new
chr15	64815636	64825639	chr15:64815636-64825639	1	-	64816297	64824335	0	13	721,192,146,88,107,140,107,115,154,126,133,577,71,	0,937,2309,2620,3480,4210,5345,5530,5730,6629,6841,8141,9932,
#Partially deleted in new
chr15	64816651	64821131	chr15:64816651-64821131	0	-	64816651	64816651	8553170	4	114,88,107,150,	0,1605,2465,4330,
#Deleted in new
chr15	64818009	64818824	chr15:64818009-64818824	0	-	64818009	64818009	8553170	2	82,568,	0,247,
#Partially deleted in new
chr15	64819036	64821457	chr15:64819036-64821457	0	-	64819036	64819036	8553170	5	187,173,107,115,91,	0,810,1945,2130,2330,
#Deleted in new
chr15	64821066	64821419	chr15:64821066-64821419	0	-	64821066	64821066	8553170	2	215,53,	0,300,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	64821589	64825625	chr15:64821589-64825625	0	-	64821589	64821589	8553170	3	1021,577,33,	0,2188,4003,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	64823265	64825617	chr15:64823265-64825617	0	-	64823265	64823265	8553170	2	1089,25,	0,2327,
#Partially deleted in new
chr15	64841882	64922481	chr15:64841882-64922481	0	+	64841882	64841882	8553170	6	146,150,117,105,99,561,	0,6710,13038,18011,19594,80038,
#Partially deleted in new
chr15	64841882	64868000	chr15:64841882-64868000	1	+	64842016	64865888	789624	5	146,117,105,99,3102,	0,13038,18011,19594,23016,
#Partially deleted in new
chr15	64841888	64868007	chr15:64841888-64868007	3	+	64842016	64865888	789624	6	140,150,117,105,99,3109,	0,6704,13032,18005,19588,23010,
#Partially deleted in new
chr15	64841947	64930920	chr15:64841947-64930920	3	+	64842016	64930920	789624	7	81,150,117,105,99,99,99,	0,6645,12973,17946,19529,79973,88874,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr15	64911901	64958700	chr15:64911901-64958700	3	+	64911930	64957188	789624	15	63,104,129,99,105,99,99,99,99,99,99,96,190,132,1598,	0,3895,5484,10019,14164,14999,18920,19585,22234,30565,31582,32750,35502,37939,45201,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	64911901	64932756	chr15:64911901-64932756	0	+	64911901	64911901	8553170	10	63,98,104,129,158,99,105,99,99,1270,	0,2131,3895,5484,7917,10019,14164,14999,18920,19585,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	64911901	64931967	chr15:64911901-64931967	0	+	64911901	64911901	8553170	4	63,99,99,481,	0,10019,18920,19585,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	64911917	64932514	chr15:64911917-64932514	1	+	64921926	64931636	789624	6	47,99,105,99,99,1028,	0,10003,14148,14983,18904,19569,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	64911927	64932320	chr15:64911927-64932320	0	+	64911930	64926129	789624	8	37,104,99,99,77,99,99,834,	0,3869,5458,9993,14166,14973,18894,19559,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	64915864	64932514	chr15:64915864-64932514	0	+	64915864	64931636	789624	4	36,117,99,1028,	0,1521,14957,15622,
#Partially deleted in new
chr15	64921926	64951261	chr15:64921926-64951261	1	+	64921926	64951015	789624	12	93,105,99,99,99,99,99,99,96,190,132,308,	0,4139,4974,8895,9560,12209,20540,21557,22725,25477,27914,29027,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr15	64921926	64958691	chr15:64921926-64958691	0	+	64921926	64951015	789624	13	93,105,99,99,99,99,99,99,96,190,132,280,1589,	0,4139,4974,8895,9560,12209,20540,21557,22725,25477,27914,29027,35176,
#Partially deleted in new
chr15	64934112	64943756	chr15:64934112-64943756	0	+	64934112	64934112	8553170	3	122,99,273,	0,8354,9371,
#Deleted in new
chr15	64943239	64943672	chr15:64943239-64943672	3	-	64943239	64943239	8553170	1	433,	0,
#Deleted in new
chr15	64950915	64951435	chr15:64950915-64951435	3	-	64950915	64950915	8553170	1	520,	0,
#Partially deleted in new
chr15	64963020	64989936	chr15:64963020-64989936	3	-	64963619	64983569	789624	9	716,141,108,109,146,81,162,87,272,	0,2299,6234,7093,11581,13454,17843,20486,26644,
#Partially deleted in new
chr15	64963026	64989474	chr15:64963026-64989474	1	-	64963619	64983569	789624	9	710,141,108,109,146,81,162,87,69,	0,2293,6228,7087,11575,13448,17837,20480,26379,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	64963026	64981627	chr15:64963026-64981627	1	-	64963619	64970212	789624	7	710,141,108,109,146,81,764,	0,2293,6228,7087,11575,13448,17837,
#Partially deleted in new
chr15	64963055	64989815	chr15:64963055-64989815	0	-	64970138	64983569	789624	8	681,141,108,109,81,162,87,151,	0,2264,6199,7058,13419,17808,20451,26609,
#Partially deleted in new
chr15	64963203	64989911	chr15:64963203-64989911	1	-	64963619	64983569	789624	8	533,141,108,109,146,162,87,247,	0,2116,6051,6910,11398,17660,20303,26461,
#Partially deleted in new
chr15	64974601	64989707	chr15:64974601-64989707	0	-	64974601	64983569	789624	6	146,81,162,87,105,43,	0,1873,6262,8905,14567,15063,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	64974629	64989506	chr15:64974629-64989506	0	-	64974629	64983569	789624	6	118,81,162,87,198,101,	0,1845,6234,8877,13989,14776,
#Partially deleted in new
chr15	64974665	64989946	chr15:64974665-64989946	0	-	64974665	64974665	8553170	4	82,81,162,282,	0,1809,6198,14999,
#Partially deleted in new
chr15	64976472	64990310	chr15:64976472-64990310	0	-	64976472	64983569	789624	4	83,162,87,221,	0,4391,7034,13617,
#Partially deleted in new
chr15	64980873	64987476	chr15:64980873-64987476	0	-	64980873	64983569	789624	3	152,87,305,	0,2633,6298,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	64980929	64989496	chr15:64980929-64989496	0	-	64980929	64983569	789624	5	96,87,90,198,91,	0,2577,6242,7689,8476,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	64980968	64988925	chr15:64980968-64988925	0	-	64980968	64983569	789624	4	57,87,90,307,	0,2538,6203,7650,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	64982932	64989911	chr15:64982932-64989911	0	-	64982932	64982932	8553170	3	248,87,247,	0,574,6732,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	64988731	64989526	chr15:64988731-64989526	0	-	64988731	64988731	8553170	2	542,18,	0,777,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	65001511	65029627	chr15:65001511-65029627	3	-	65003061	65029613	789624	9	1745,83,79,92,76,103,123,210,223,	0,3342,4601,14924,18685,20002,22160,25319,27893,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	65002577	65029616	chr15:65002577-65029616	0	-	65003061	65029613	789624	10	141,403,83,79,92,76,103,123,210,212,	0,276,2276,3535,13858,17619,18936,21094,24253,26827,
#Partially deleted in new
chr15	65002995	65029598	chr15:65002995-65029598	0	-	65026829	65029598	789624	8	261,83,79,92,76,103,223,194,	0,1858,3117,13440,17201,18518,23822,26409,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	65015832	65029639	chr15:65015832-65029639	0	-	65020256	65029613	789624	4	695,76,210,235,	0,4364,10998,13572,
#Partially deleted in new
chr15	65016254	65029574	chr15:65016254-65029574	0	-	65016254	65016254	8553170	5	273,76,123,210,170,	0,3942,7417,10576,13150,
#Partially deleted in new
chr15	65021513	65026931	chr15:65021513-65026931	0	-	65021513	65021513	8553170	2	103,101,	0,5317,
#Deleted in new
chr15	65026087	65026676	chr15:65026087-65026676	7	+	65026087	65026087	16724991	1	589,	0,
#Partially deleted in new
chr15	65026747	65029532	chr15:65026747-65029532	0	-	65026747	65026747	8553170	2	293,128,	0,2657,
#Partially deleted in new
chr15	65045369	65053396	chr15:65045369-65053396	3	+	65050004	65053164	789624	4	213,205,91,431,	0,4527,6145,7596,
#Deleted in new
chr15	65049187	65049802	chr15:65049187-65049802	3	-	65049187	65049187	8553170	1	615,	0,
#Partially deleted in new
chr15	65053336	65068112	chr15:65053336-65068112	3	-	65054898	65067835	0	5	1938,191,74,57,380,	0,5090,6008,11880,14396,
#Partially deleted in new
chr15	65054227	65067943	chr15:65054227-65067943	1	-	65054898	65067835	0	4	1047,191,74,211,	0,4199,5117,13505,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	65054776	65076690	chr15:65054776-65076690	1	-	65054898	65076598	0	5	498,191,74,57,162,	0,3650,4568,10440,21752,
#Deleted in new
chr15	65076815	65079939	chr15:65076815-65079939	3	+	65076815	65078192	789624	1	3124,	0,
#Deleted in new
chr15	65083041	65083663	chr15:65083041-65083663	3	-	65083041	65083041	8553170	1	622,	0,
#Partially deleted in new
chr15	65092769	65115197	chr15:65092769-65115197	3	-	65093096	65106215	789624	6	462,102,210,579,293,48,	0,1705,6735,9336,13326,22380,
#Partially deleted in new
chr15	65093005	65106359	chr15:65093005-65106359	1	-	65093096	65106215	789624	5	226,102,210,579,264,	0,1469,6499,9100,13090,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	65093008	65101628	chr15:65093008-65101628	0	-	65093008	65093008	8553170	2	223,7154,	0,1466,
#Partially deleted in new
chr15	65093047	65106241	chr15:65093047-65106241	0	-	65094550	65106215	789624	4	184,190,120,146,	0,1427,9517,13048,
#Partially deleted in new
chr15	65105533	65105800	chr15:65105533-65105800	7	+	65105533	65105533	16724991	1	267,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	65117378	65133836	chr15:65117378-65133836	3	-	65118716	65133781	789624	5	1462,88,237,139,925,	0,1997,2339,11653,15533,
#Partially deleted in new
chr15	65118758	65129170	chr15:65118758-65129170	0	-	65118758	65129170	789624	3	82,88,139,	0,617,10273,
#Deleted in new
chr15	65118963	65119774	chr15:65118963-65119774	0	-	65118963	65118963	8553170	2	500,57,	0,754,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr15	65148218	65185342	chr15:65148218-65185342	3	-	65150822	65185153	789624	14	2695,107,93,300,165,89,165,177,42,160,155,118,161,268,	0,4211,5328,6563,7473,8625,9527,10356,14385,15810,18412,30715,31825,36856,
#Partially deleted in new
chr15	65150513	65185216	chr15:65150513-65185216	0	-	65157883	65185153	789624	14	400,107,93,300,165,155,165,65,42,160,155,118,161,142,	0,1916,3033,4268,5178,6264,7232,8173,12090,13515,16117,28420,29530,34561,
#Partially deleted in new
chr15	65154678	65155851	chr15:65154678-65155851	0	-	65154678	65154678	8553170	2	403,160,	0,1013,
#Partially deleted in new
chr15	65156685	65185342	chr15:65156685-65185342	0	-	65156685	65156685	8553170	9	247,165,177,42,160,155,118,161,268,	0,1060,1889,5918,7343,9945,22248,23358,28389,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	65158190	65162647	chr15:65158190-65162647	0	-	65158190	65158190	8553170	2	561,44,	0,4413,
#Partially deleted in new
chr15	65166650	65184484	chr15:65166650-65184484	0	-	65166650	65180181	789624	4	135,118,161,119,	0,12283,13393,17715,
#Partially deleted in new
chr15	65194757	65211488	chr15:65194757-65211488	3	-	65196730	65209755	789624	9	4342,158,109,315,180,270,93,167,61,	0,7114,8604,9510,10529,12024,12914,14937,16670,
#Duplicated in new
chr15	65226471	65226697	chr15:65226471-65226697	3	-	65226471	65226471	8553170	1	226,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	65229860	65229967	chr15:65229860-65229967	3	+	65229860	65229860	8553170	1	107,	0,
#Partially deleted in new
chr15	65234459	65261007	chr15:65234459-65261007	0	-	65248213	65261007	789624	4	364,112,79,123,	0,13657,25004,26425,
#Partially deleted in new
chr15	65258093	65286872	chr15:65258093-65286872	3	-	65259406	65286426	0	6	1452,142,172,207,138,620,	0,2791,5055,8468,12841,28159,
#Partially deleted in new
chr15	65258095	65286843	chr15:65258095-65286843	1	-	65259406	65286426	0	4	1447,142,172,591,	0,2789,5053,28157,
#Partially deleted in new
chr15	65258098	65286492	chr15:65258098-65286492	1	-	65259406	65286426	789624	6	1444,142,172,207,138,240,	0,2786,5050,8463,12836,28154,
#Partially deleted in new
chr15	65259285	65286366	chr15:65259285-65286366	0	-	65259285	65259285	8553170	5	257,142,172,138,114,	0,1599,3863,11649,26967,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	65266576	65300618	chr15:65266576-65300618	0	-	65266576	65266576	8553170	4	192,138,86,422,	0,4358,15970,33620,
#Partially deleted in new
chr15	65285460	65285591	chr15:65285460-65285591	3	-	65285460	65285460	5263520	1	131,	0,
#Deleted in new
chr15	65301921	65302311	chr15:65301921-65302311	7	+	65301921	65301921	16724991	1	390,	0,
#Partially deleted in new
chr15	65327126	65378040	chr15:65327126-65378040	3	-	65328908	65377788	789624	14	2022,208,139,105,192,165,248,166,159,138,131,145,306,355,	0,2263,2599,3166,3423,3923,4285,4814,6130,7601,8164,8685,47970,50559,
#Partially deleted in new
chr15	65329578	65356372	chr15:65329578-65356372	0	-	65329578	65335954	789624	12	19,139,105,192,165,248,166,159,138,131,145,176,	0,147,714,971,1471,1833,2362,3678,5149,5712,6233,26618,
#Deleted in new
chr15	65331103	65334641	chr15:65331103-65334641	0	-	65331103	65331103	8553170	5	111,248,166,159,64,	0,308,837,2153,3474,
#Partially deleted in new
chr15	65334770	65355911	chr15:65334770-65355911	0	-	65334770	65355758	789624	4	95,131,145,193,	0,520,1041,20948,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	65373488	65375300	chr15:65373488-65375300	0	-	65373488	65373488	8553170	2	640,204,	0,1608,
#Partially deleted in new
chr15	65381463	65423072	chr15:65381463-65423072	3	-	65384008	65422862	789624	20	2956,162,229,106,138,171,128,184,102,237,171,138,165,414,156,141,137,142,351,280,	0,3490,4367,5087,6985,7344,7820,8691,10416,10670,11897,12947,13630,14286,15370,19342,20887,28714,29556,41329,
#Deleted in new
chr15	65381486	65385770	chr15:65381486-65385770	0	-	65381486	65381486	8553170	3	2933,162,312,	0,3467,3972,
#Partially deleted in new
chr15	65381486	65396429	chr15:65381486-65396429	0	-	65381486	65381486	8553170	14	2933,162,229,106,138,171,128,184,102,237,171,138,165,680,	0,3467,4344,5064,6962,7321,7797,8668,10393,10647,11874,12924,13607,14263,
#Deleted in new
chr15	65384847	65386031	chr15:65384847-65386031	0	-	65384847	65384847	8553170	2	268,201,	0,983,
#Deleted in new
chr15	65385615	65386645	chr15:65385615-65386645	0	-	65385615	65385615	8553170	2	444,95,	0,935,
#Partially deleted in new
chr15	65410365	65411085	chr15:65410365-65411085	0	-	65410365	65410365	8553170	2	512,66,	0,654,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr15	65442462	65517273	chr15:65442462-65517273	3	-	65446883	65515692	0	20	4544,112,143,153,147,146,136,153,80,160,178,101,62,129,111,169,174,113,270,1618,	0,8536,9497,11800,13762,21298,24215,24608,31746,36417,37759,39052,42636,45227,47726,55401,58143,64780,69832,73193,
#Partially deleted in new
chr15	65446616	65517680	chr15:65446616-65517680	1	-	65446883	65512553	0	18	390,112,143,146,136,153,80,160,178,101,62,129,111,169,174,113,270,195,	0,4382,5343,17144,20061,20454,27592,32263,33605,34898,38482,41073,43572,51247,53989,60626,65678,70869,
#Partially deleted in new
chr15	65446618	65517699	chr15:65446618-65517699	1	-	65446883	65512553	0	20	388,112,143,153,147,146,136,153,80,160,178,101,62,129,111,169,174,113,270,214,	0,4380,5341,7644,9606,17142,20059,20452,27590,32261,33603,34896,38480,41071,43570,51245,53987,60624,65676,70867,
#Partially deleted in new
chr15	65446620	65517704	chr15:65446620-65517704	1	-	65446883	65515692	0	20	386,112,143,147,146,136,153,80,160,178,101,62,129,111,169,174,113,270,136,219,	0,4378,5339,9604,17140,20057,20450,27588,32259,33601,34894,38478,41069,43568,51243,53985,60622,65674,69035,70865,
#Partially deleted in new
chr15	65446636	65467192	chr15:65446636-65467192	0	-	65446883	65467192	789624	7	370,112,143,153,146,136,122,	0,4362,5323,7626,17124,20041,20434,
#Partially deleted in new
chr15	65446739	65515804	chr15:65446739-65515804	1	-	65446883	65515692	0	20	267,112,143,153,147,146,136,153,80,160,178,101,62,129,111,169,174,113,270,149,	0,4259,5220,7523,9485,17021,19938,20331,27469,32140,33482,34775,38359,40950,43449,51124,53866,60503,65555,68916,
#Partially deleted in new
chr15	65446740	65515804	chr15:65446740-65515804	0	-	65455817	65515692	789624	21	266,112,143,153,130,147,146,136,153,80,160,178,101,62,129,111,169,174,113,270,149,	0,4258,5219,7522,8971,9484,17020,19937,20330,27468,32139,33481,34774,38358,40949,43448,51123,53865,60502,65554,68915,
#Partially deleted in new
chr15	65450738	65455691	chr15:65450738-65455691	0	-	65450738	65450738	8553170	4	372,143,153,38,	0,1221,3524,4915,
#Partially deleted in new
chr15	65452043	65490286	chr15:65452043-65490286	0	-	65452043	65490286	789624	9	59,153,147,146,136,153,62,129,98,	0,2219,4181,11717,14634,15027,33055,35646,38145,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	65455393	65463845	chr15:65455393-65463845	0	-	65455393	65455393	8553170	3	448,147,85,	0,831,8367,
#Partially deleted in new
chr15	65456286	65467155	chr15:65456286-65467155	0	-	65456286	65456286	8553170	3	85,136,85,	0,10391,10784,
#Partially deleted in new
chr15	65458573	65459534	chr15:65458573-65459534	7	+	65458573	65458573	16724991	2	451,34,	0,927,
#Deleted in new
chr15	65475317	65475614	chr15:65475317-65475614	7	-	65475317	65475317	16724991	1	297,	0,
#Partially deleted in new
chr15	65497916	65517663	chr15:65497916-65517663	0	-	65497916	65512553	789624	4	116,113,270,178,	0,9326,14378,19569,
#Partially deleted in new
chr15	65497950	65512831	chr15:65497950-65512831	0	-	65497950	65512583	789624	4	82,174,113,537,	0,2655,9292,14344,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	65502740	65502836	chr15:65502740-65502836	3	+	65502740	65502740	8553170	1	96,	0,
#Partially deleted in new
chr15	65507302	65517338	chr15:65507302-65517338	0	-	65507302	65515692	789624	4	53,270,136,133,	0,4992,8353,9903,
#Partially deleted in new
chr15	65511960	65517628	chr15:65511960-65517628	0	-	65511960	65511960	8553170	3	148,270,143,	0,334,5525,
#Partially deleted in new
chr15	65512301	65517681	chr15:65512301-65517681	0	-	65512301	65512553	789624	2	263,301,	0,5079,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	65530465	65578352	chr15:65530465-65578352	3	+	65530631	65576379	789624	11	253,43,74,165,52,111,128,113,107,132,2050,	0,21210,24421,26273,28214,32308,33749,39625,41082,41769,45837,
#Partially deleted in new
chr15	65530481	65576637	chr15:65530481-65576637	1	+	65530631	65576379	789624	10	237,43,74,52,111,128,113,107,132,335,	0,21194,24405,28198,32292,33733,39609,41066,41753,45821,
#Partially deleted in new
chr15	65530504	65577062	chr15:65530504-65577062	1	+	65530631	65576379	789624	11	139,43,74,165,52,111,128,113,107,132,760,	0,21171,24382,26234,28175,32269,33710,39586,41043,41730,45798,
#Partially deleted in new
chr15	65530587	65551937	chr15:65530587-65551937	0	+	65530587	65530587	8553170	2	131,262,	0,21088,
#Partially deleted in new
chr15	65530753	65576955	chr15:65530753-65576955	1	+	65556885	65576379	789624	11	80,43,74,165,52,111,128,113,107,132,653,	0,20922,24133,25985,27926,32020,33461,39337,40794,41481,45549,
#Partially deleted in new
chr15	65531259	65576977	chr15:65531259-65576977	1	+	65556885	65576379	789624	11	182,43,74,165,52,111,128,113,107,132,675,	0,20416,23627,25479,27420,31514,32955,38831,40288,40975,45043,
#Partially deleted in new
chr15	65550818	65576726	chr15:65550818-65576726	1	+	65556885	65576379	789624	11	122,43,74,165,52,111,128,113,107,132,424,	0,857,4068,5920,7861,11955,13396,19272,20729,21416,25484,
#Partially deleted in new
chr15	65551025	65570199	chr15:65551025-65570199	0	+	65556885	65570199	789624	8	107,43,74,165,52,111,128,109,	0,650,3861,5713,7654,11748,13189,19065,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	65564221	65566967	chr15:65564221-65566967	0	+	65564221	65564221	8553170	1	2746,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	65574264	65576499	chr15:65574264-65576499	0	+	65574264	65574264	8553170	2	286,197,	0,2038,
#Partially deleted in new
chr15	65578752	65611136	chr15:65578752-65611136	0	-	65610957	65611131	789624	12	907,66,119,134,145,93,143,119,156,108,284,341,	0,3201,6017,12845,14675,16980,19568,20119,21021,26376,28406,32043,
#Partially deleted in new
chr15	65578781	65611245	chr15:65578781-65611245	3	-	65579407	65607380	789624	12	878,66,119,134,145,93,143,119,156,108,284,148,	0,3172,5988,12816,14646,16951,19539,20090,20992,26347,28377,32316,
#Partially deleted in new
chr15	65579026	65611121	chr15:65579026-65611121	1	-	65579407	65610748	789624	12	633,66,119,134,145,93,143,119,156,108,267,436,	0,2927,5743,12571,14401,16706,19294,19845,20747,26102,28132,31659,
#Partially deleted in new
chr15	65579064	65611258	chr15:65579064-65611258	1	-	65579407	65605221	789624	12	595,66,119,134,145,93,143,119,156,108,141,161,	0,2889,5705,12533,14363,16668,19256,19807,20709,26064,28237,32033,
#Partially deleted in new
chr15	65579096	65611131	chr15:65579096-65611131	1	-	65579407	65607380	789624	12	563,66,119,134,142,93,143,119,156,104,124,34,	0,2857,5673,12501,14331,16636,19224,19775,20677,26032,28205,32001,
#Partially deleted in new
chr15	65579146	65611242	chr15:65579146-65611242	1	-	65579407	65611148	789624	11	513,66,119,134,145,93,143,119,156,108,145,	0,2807,5623,12451,14281,16586,19174,19725,20627,25982,31951,
#Partially deleted in new
chr15	65579247	65611289	chr15:65579247-65611289	1	-	65579407	65607380	789624	11	412,66,119,134,145,93,143,119,156,284,192,	0,2706,5522,12350,14180,16485,19073,19624,20526,27911,31850,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	65584828	65586958	chr15:65584828-65586958	0	-	65584828	65584828	8553170	2	60,533,	0,1597,
#Partially deleted in new
chr15	65595732	65607409	chr15:65595732-65607409	0	-	65598947	65607380	789624	6	93,143,119,92,108,251,	0,2588,3139,4105,9396,11426,
#Partially deleted in new
chr15	65595764	65598865	chr15:65595764-65598865	0	-	65595764	65595764	8553170	2	61,545,	0,2556,
#Partially deleted in new
chr15	65599376	65611154	chr15:65599376-65611154	0	-	65599376	65599376	8553170	4	553,108,267,57,	0,5752,7782,11721,
#Partially deleted in new
chr15	65599809	65611131	chr15:65599809-65611131	0	-	65599809	65605221	789624	3	120,108,336,	0,5319,10986,
#Partially deleted in new
chr15	65599846	65611223	chr15:65599846-65611223	0	-	65599846	65611148	789624	4	83,108,267,126,	0,5282,7312,11251,
#Partially deleted in new
chr15	65599882	65611121	chr15:65599882-65611121	0	-	65599882	65607380	789624	4	47,104,141,326,	0,5246,7419,10913,
#Partially deleted in new
chr15	65599896	65611148	chr15:65599896-65611148	0	-	65610957	65611131	789624	4	33,108,267,353,	0,5232,7262,10899,
#Partially deleted in new
chr15	65605182	65611123	chr15:65605182-65611123	0	-	65605182	65610748	789624	2	54,438,	0,5503,
#Partially deleted in new
chr15	65605202	65611139	chr15:65605202-65611139	0	-	65610957	65611131	789624	3	34,284,454,	0,1956,5483,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	65611365	65652929	chr15:65611365-65652929	0	+	65611365	65611365	8553170	8	1248,101,2016,109,87,92,561,1260,	0,7514,12589,28229,33061,34246,39016,40304,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	65611377	65625857	chr15:65611377-65625857	0	+	65611377	65611377	8553170	2	525,41,	0,14439,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	65611404	65660995	chr15:65611404-65660995	1	+	65624080	65660321	789624	12	363,34,101,2016,109,87,92,561,90,167,60,303,	0,1175,7475,12550,28190,33022,34207,38977,40265,41237,48874,49288,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	65611811	65624018	chr15:65611811-65624018	0	+	65611811	65611811	8553170	4	91,34,101,64,	0,768,7068,12143,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	65621931	65656260	chr15:65621931-65656260	3	+	65624080	65654079	789624	10	161,2016,54,109,87,92,561,90,167,2431,	0,2023,16196,17663,22495,23680,28450,29738,30710,31898,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	65621931	65656260	chr15:65621931-65656260	1	+	65624080	65654079	789624	9	161,2016,54,109,87,92,561,167,2431,	0,2023,16196,17663,22495,23680,28450,30710,31898,
#Partially deleted in new
chr15	65622008	65654080	chr15:65622008-65654080	1	+	65624080	65654079	789624	6	84,2016,561,90,167,251,	0,1946,28373,29661,30633,31821,
#Partially deleted in new
chr15	65623998	65654110	chr15:65623998-65654110	1	+	65624080	65654079	789624	8	1972,54,109,87,92,561,167,281,	0,14129,15596,20428,21613,26383,28643,29831,
#Partially deleted in new
chr15	65624080	65654079	chr15:65624080-65654079	1	+	65624080	65654079	789624	8	1890,109,87,92,561,90,167,250,	0,15514,20346,21531,26301,27589,28561,29749,
#Partially deleted in new
chr15	65642904	65654191	chr15:65642904-65654191	0	+	65642904	65642904	8553170	7	102,87,92,561,90,167,362,	0,1522,2707,7477,8765,9737,10925,
#Partially deleted in new
chr15	65643927	65650608	chr15:65643927-65650608	0	+	65643927	65643927	8553170	2	586,227,	0,6454,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	65652738	65655513	chr15:65652738-65655513	0	+	65652738	65654829	789624	2	70,784,	0,1991,
#Deleted in new
chr15	65655619	65656085	chr15:65655619-65656085	3	-	65655619	65655619	8553170	1	466,	0,
#Partially deleted in new
chr15	65658045	65661929	chr15:65658045-65661929	0	-	65661850	65661929	789624	2	392,88,	0,3796,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr15	65659122	65792124	chr15:65659122-65792124	1	-	65661850	65756450	789624	33	2865,65,163,118,255,199,147,176,95,190,1097,132,117,129,142,129,207,136,134,146,219,101,176,145,59,67,239,170,70,250,333,79,115,	0,5207,5437,6222,8326,8802,10656,10890,12669,17322,31292,37243,38144,41421,41928,42639,43182,43750,46968,56355,58655,63725,69949,70411,72519,73629,78584,79583,82592,93256,97017,102237,132887,
#Partially deleted in new
chr15	65661776	65792124	chr15:65661776-65792124	3	-	65661850	65756450	789624	32	211,65,163,118,255,199,147,176,95,190,1097,132,117,142,129,207,136,134,146,219,101,176,145,59,67,239,170,70,250,333,72,115,	0,2553,2783,3568,5672,6148,8002,8236,10015,14668,28638,34589,35490,39274,39985,40528,41096,44314,53701,56001,61071,67295,67757,69865,70975,75930,76929,79938,90602,94363,99590,130233,
#Partially deleted in new
chr15	65661814	65761437	chr15:65661814-65761437	1	-	65661850	65756450	789624	33	173,65,163,27,118,255,199,147,176,95,190,1097,132,117,132,142,129,207,136,134,146,219,101,176,145,59,67,239,170,70,250,333,78,	0,2515,2745,3384,3530,5634,6110,7964,8198,9977,14630,28600,34551,35452,38729,39236,39947,40490,41058,44276,53663,55963,61033,67257,67719,69827,70937,75892,76891,79900,90564,94325,99545,
#Partially deleted in new
chr15	65661820	65664956	chr15:65661820-65664956	0	-	65661820	65661820	8553170	3	167,65,397,	0,2509,2739,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	65680634	65690538	chr15:65680634-65690538	0	-	65680634	65680634	8553170	2	680,124,	0,9780,
#Partially deleted in new
chr15	65691457	65792293	chr15:65691457-65792293	0	-	65691457	65756450	789624	22	54,132,117,142,129,207,136,134,146,219,101,176,145,59,67,239,170,70,250,333,79,284,	0,4908,5809,9593,10304,10847,11415,14633,24020,26320,31390,37614,38076,40184,41294,46249,47248,50257,60921,64682,69902,100552,
#Partially deleted in new
chr15	65696315	65701801	chr15:65696315-65701801	0	-	65696315	65696315	8553170	4	182,117,142,40,	0,951,4735,5446,
#Partially deleted in new
chr15	65715074	65792207	chr15:65715074-65792207	0	-	65715074	65715074	8553170	14	549,219,101,176,145,59,67,239,170,70,250,333,79,198,	0,2703,7773,13997,14459,16567,17677,22632,23631,26640,37304,41065,46285,76935,
#Deleted in new
chr15	65719245	65719332	chr15:65719245-65719332	3	-	65719245	65719245	5263520	1	87,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	65766459	65767398	chr15:65766459-65767398	3	-	65766459	65766459	8553170	2	317,111,	0,828,
#Deleted in new
chr15	65771175	65772139	chr15:65771175-65772139	7	-	65771175	65771175	16724991	1	964,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	65792446	65859751	chr15:65792446-65859751	0	+	65792446	65792446	8553170	3	326,94,133,	0,58417,67172,
#Partially deleted in new
chr15	65792446	65877819	chr15:65792446-65877819	0	+	65792446	65792446	8553170	4	203,94,196,58,	0,58417,84885,85315,
#Partially deleted in new
chr15	65816301	65817481	chr15:65816301-65817481	7	-	65816301	65816301	16724991	2	562,317,	0,863,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	65843483	65843558	chr15:65843483-65843558	3	+	65843483	65843483	8553170	1	75,	0,
#Partially deleted in new
chr15	65869455	65888247	chr15:65869455-65888247	1	+	65869585	65887840	789624	5	170,36,144,81,547,	0,7876,8356,10215,18245,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	65869457	65891991	chr15:65869457-65891991	3	+	65869585	65887840	0	5	168,196,194,81,4291,	0,7874,8304,10213,18243,
#Partially deleted in new
chr15	65869463	65887736	chr15:65869463-65887736	0	+	65869585	65887736	789624	4	162,196,194,36,	0,7868,8298,18237,
#Partially deleted in new
chr15	65869490	65887859	chr15:65869490-65887859	1	+	65869585	65887840	789624	5	135,196,194,27,159,	0,7841,8271,10234,18210,
#Partially deleted in new
chr15	65869540	65888635	chr15:65869540-65888635	1	+	65869585	65887752	0	5	85,196,194,9,912,	0,7791,8221,10130,18183,
#Partially deleted in new
chr15	65870012	65887791	chr15:65870012-65887791	0	+	65877882	65887791	789624	5	73,196,194,81,91,	0,7319,7749,9658,17688,
#Partially deleted in new
chr15	65895078	66253747	chr15:65895078-66253747	3	-	65897933	66128403	789624	23	3016,207,57,237,129,129,129,129,135,147,103,164,121,175,213,137,121,247,93,101,102,128,143,	0,3649,11006,18658,20391,21069,21749,22887,27259,27744,33346,34641,35744,62468,69829,75474,85699,87163,199323,224007,228820,233227,358526,
#Partially deleted in new
chr15	65895295	66253737	chr15:65895295-66253737	1	-	65897933	66123974	789624	21	2799,207,57,237,129,129,129,129,135,147,103,164,121,175,213,137,121,247,93,102,133,	0,3432,10789,18441,20174,20852,21532,22670,27042,27527,33129,34424,35527,62251,69612,75257,85482,86946,199106,228603,358309,
#Partially deleted in new
chr15	65895295	66253737	chr15:65895295-66253737	1	-	65897933	66128403	789624	23	2799,207,57,237,129,129,129,129,135,147,103,164,121,175,213,137,121,247,93,101,102,106,133,	0,3432,10789,18441,20174,20852,21532,22670,27042,27527,33129,34424,35527,62251,69612,75257,85482,86946,199106,223790,228603,233010,358309,
#Partially deleted in new
chr15	65897933	66128403	chr15:65897933-66128403	1	-	65897933	66128403	789624	25	161,207,57,102,67,119,237,129,129,129,129,135,147,103,164,121,175,213,137,121,247,93,101,102,98,	0,794,8151,11100,11806,14148,15803,17536,18214,18894,20032,24404,24889,30491,31786,32889,59613,66974,72619,82844,84308,196468,221152,225965,230372,
#Partially deleted in new
chr15	65898732	65914118	chr15:65898732-65914118	0	-	65898732	65898732	8553170	7	202,42,57,88,67,71,382,	0,3763,7352,10301,11007,11183,15004,
#Partially deleted in new
chr15	65901771	65970689	chr15:65901771-65970689	0	-	65915544	65970563	789624	18	766,57,46,102,67,237,129,129,359,129,135,147,103,164,121,175,213,137,	0,4313,4853,7262,7968,11965,13698,14376,14826,16194,20566,21051,26653,27948,29051,55775,63136,68781,
#Partially deleted in new
chr15	65902195	65912200	chr15:65902195-65912200	0	-	65906122	65912200	789624	6	342,57,46,102,67,119,	0,3889,4429,6838,7544,9886,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	65905273	65909771	chr15:65905273-65909771	0	-	65909074	65909771	789624	4	563,57,88,32,	0,811,3760,4466,
#Partially deleted in new
chr15	65905783	65912478	chr15:65905783-65912478	0	-	65905783	65905783	8553170	7	91,57,46,102,67,119,42,	0,301,841,3250,3956,6298,6653,
#Deleted in new
chr15	65913525	65915598	chr15:65913525-65915598	0	-	65913525	65913525	8553170	2	448,129,	0,1944,
#Deleted in new
chr15	65921691	65922375	chr15:65921691-65922375	0	-	65922054	65922375	789624	2	416,38,	0,646,
#Partially deleted in new
chr15	65929720	65971220	chr15:65929720-65971220	0	-	65929720	65970563	789624	6	163,121,175,213,137,55,	0,1102,27826,35187,40832,41445,
#Partially deleted in new
chr15	65964951	65971230	chr15:65964951-65971230	0	-	65964951	65964951	8553170	3	169,137,27,	0,5601,6252,
#Partially deleted in new
chr15	65965046	65971238	chr15:65965046-65971238	0	-	65965046	65965046	8553170	2	74,686,	0,5506,
#Partially deleted in new
chr15	65965174	65971264	chr15:65965174-65971264	0	-	65965174	65965174	8553170	4	209,65,137,61,	0,1897,5378,6029,
#Deleted in new
chr15	66040232	66040332	chr15:66040232-66040332	3	+	66040232	66040232	5263520	1	100,	0,
#Partially deleted in new
chr15	66278497	66293357	chr15:66278497-66293357	3	-	66278497	66278497	8553170	2	546,32,	0,14828,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr15	66293216	66333898	chr15:66293216-66333898	1	+	66295097	66333312	789624	17	151,154,129,136,177,79,180,170,162,248,93,534,155,179,146,175,895,	0,1771,13607,15492,18507,20822,21819,25232,27354,29470,30276,32614,35753,36004,38658,39519,39787,
#Partially deleted in new
chr15	66293290	66306950	chr15:66293290-66306950	0	+	66295097	66306950	789624	3	46,154,127,	0,1697,13533,
#Partially deleted in new
chr15	66293306	66325988	chr15:66293306-66325988	0	+	66295097	66308776	789624	11	61,154,56,136,177,79,180,162,248,93,158,	0,1681,13590,15402,18417,20732,21729,27264,29380,30186,32524,
#Partially deleted in new
chr15	66293500	66326451	chr15:66293500-66326451	0	+	66293500	66293500	8553170	12	235,154,129,136,177,79,180,170,83,248,93,621,	0,1487,13323,15208,18223,20538,21535,24948,27149,29186,29992,32330,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr15	66293546	66333744	chr15:66293546-66333744	3	+	66293596	66333312	789624	17	189,154,129,136,177,79,180,170,162,248,93,534,155,179,146,175,741,	0,1441,13277,15162,18177,20492,21489,24902,27024,29140,29946,32284,35423,35674,38328,39189,39457,
#Partially deleted in new
chr15	66293595	66326561	chr15:66293595-66326561	0	+	66293595	66293595	8553170	12	140,154,129,136,177,79,180,170,162,248,93,731,	0,1392,13228,15113,18128,20443,21440,24853,26975,29091,29897,32235,
#Partially deleted in new
chr15	66293638	66315074	chr15:66293638-66315074	0	+	66306932	66315074	789624	7	97,154,191,136,177,79,39,	0,1349,13123,15070,18085,20400,21397,
#Partially deleted in new
chr15	66293831	66308844	chr15:66293831-66308844	0	+	66295097	66308844	789624	4	85,154,129,136,	0,1156,12992,14877,
#Deleted in new
chr15	66293842	66295073	chr15:66293842-66295073	0	+	66293842	66293842	8553170	2	332,86,	0,1145,
#Partially deleted in new
chr15	66294058	66308827	chr15:66294058-66308827	0	+	66295097	66308827	789624	4	390,154,129,119,	0,929,12765,14650,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr15	66295096	66333728	chr15:66295096-66333728	0	+	66295097	66308776	789624	16	45,56,136,177,79,180,170,162,248,93,534,155,179,146,175,725,	0,11800,13612,16627,18942,19939,23352,25474,27590,28396,30734,33873,34124,36778,37639,37907,
#Partially deleted in new
chr15	66306819	66311901	chr15:66306819-66311901	0	+	66306819	66306819	8553170	3	133,136,178,	0,1889,4904,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	66314913	66331703	chr15:66314913-66331703	3	-	66314913	66314913	8553170	2	206,294,	0,16496,
#Partially deleted in new
chr15	66328996	66329548	chr15:66328996-66329548	0	+	66328996	66328996	8553170	2	128,328,	0,224,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	66329279	66330024	chr15:66329279-66330024	0	+	66329279	66329279	8553170	2	120,412,	0,333,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	66336205	66356716	chr15:66336205-66356716	3	-	66336957	66352947	789624	8	976,207,64,123,76,79,141,78,	0,4944,12854,13109,15319,15923,16609,20433,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	66336383	66356685	chr15:66336383-66356685	0	-	66349424	66352947	789624	7	798,207,64,123,79,141,47,	0,4766,12676,12931,15745,16431,20255,
#Partially deleted in new
chr15	66336980	66386724	chr15:66336980-66386724	0	-	66336980	66352947	789624	8	201,207,64,123,76,79,141,118,	0,4169,12079,12334,14544,15148,15834,49626,
#Partially deleted in new
chr15	66347206	66347342	chr15:66347206-66347342	3	-	66347206	66347206	789624	1	136,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	66348275	66348375	chr15:66348275-66348375	3	+	66348275	66348275	8553170	1	100,	0,
#Partially deleted in new
chr15	66349301	66386712	chr15:66349301-66386712	0	-	66349301	66352947	789624	5	136,76,79,141,63,	0,2223,2827,3513,37348,
#Partially deleted in new
chr15	66349375	66386746	chr15:66349375-66386746	0	-	66349375	66352947	789624	5	62,76,79,141,327,	0,2149,2753,3439,37044,
#Partially deleted in new
chr15	66379269	66386707	chr15:66379269-66386707	0	-	66379269	66379269	8553170	2	671,58,	0,7380,
#Partially deleted in new
chr15	66379336	66379915	chr15:66379336-66379915	7	-	66379336	66379336	16724991	1	579,	0,
#Partially deleted in new
chr15	66386816	66492312	chr15:66386816-66492312	3	+	66387347	66490615	0	11	611,211,147,78,52,125,202,65,62,46,1811,	0,48210,49929,56463,57839,94938,98173,100411,102398,102901,103685,
#Partially deleted in new
chr15	66386836	66444966	chr15:66386836-66444966	0	+	66386836	66386836	8553170	5	591,211,147,78,311,	0,48190,49909,56443,57819,
#Partially deleted in new
chr15	66414932	66415198	chr15:66414932-66415198	7	-	66414932	66414932	16724991	1	266,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	66446454	66446777	chr15:66446454-66446777	7	-	66446454	66446454	16724991	1	323,	0,
#Partially deleted in new
chr15	66453453	66491343	chr15:66453453-66491343	1	+	66453503	66490615	789624	7	90,125,202,65,62,46,842,	0,28301,31536,33774,35761,36264,37048,
#Deleted in new
chr15	66488657	66492109	chr15:66488657-66492109	3	-	66488657	66488657	8553170	2	2060,108,	0,3344,
#Partially deleted in new
chr15	66490134	66497750	chr15:66490134-66497750	3	-	66494435	66497731	789624	4	583,138,90,109,	0,4280,5195,7507,
#Partially deleted in new
chr15	66490305	66497750	chr15:66490305-66497750	1	-	66494435	66497731	789624	4	412,138,90,109,	0,4109,5024,7336,
#Partially deleted in new
chr15	66490635	66497780	chr15:66490635-66497780	0	-	66494435	66497731	789624	4	82,276,90,139,	0,3641,4694,7006,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	66493467	66497780	chr15:66493467-66497780	0	-	66495257	66497731	789624	3	1085,517,139,	0,1435,4174,
#Partially deleted in new
chr15	66493812	66497813	chr15:66493812-66497813	1	-	66494435	66497731	789624	3	740,90,172,	0,1517,3829,
#Partially deleted in new
chr15	66493843	66497759	chr15:66493843-66497759	0	-	66497527	66497731	789624	3	709,90,270,	0,1486,3646,
#Partially deleted in new
chr15	66493879	66497762	chr15:66493879-66497762	1	-	66494435	66497731	789624	2	673,121,	0,3762,
#Partially deleted in new
chr15	66494227	66497738	chr15:66494227-66497738	1	-	66497527	66497731	789624	2	325,249,	0,3262,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	66496957	66497034	chr15:66496957-66497034	3	-	66496957	66496957	5263520	1	77,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	66498014	66504883	chr15:66498014-66504883	3	-	66499406	66504790	0	10	1638,121,84,157,130,125,139,107,172,96,	0,2041,2278,2934,3360,3773,4597,5043,5343,6773,
#Partially deleted in new
chr15	66499319	66504846	chr15:66499319-66504846	0	-	66499319	66499319	8553170	8	333,121,84,556,125,553,172,59,	0,736,973,1629,2468,3292,4038,5468,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	66499322	66499818	chr15:66499322-66499818	0	-	66499322	66499322	8553170	2	330,78,	0,418,
#Partially deleted in new
chr15	66499322	66524532	chr15:66499322-66524532	1	-	66499406	66502750	789624	11	330,121,84,157,130,125,139,107,172,421,78,	0,733,970,1626,2052,2465,3289,3735,4035,6005,25132,
#Partially deleted in new
chr15	66499345	66504827	chr15:66499345-66504827	0	-	66499345	66499345	8553170	9	307,121,84,157,130,125,260,172,40,	0,710,947,1603,2029,2442,3266,4012,5442,
#Partially deleted in new
chr15	66499574	66504846	chr15:66499574-66504846	0	-	66499574	66504790	789624	6	78,93,60,107,172,59,	0,481,3116,3483,3783,5213,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	66500055	66500842	chr15:66500055-66500842	0	-	66500055	66500055	8553170	2	121,550,	0,237,
#Partially deleted in new
chr15	66500057	66502407	chr15:66500057-66502407	0	-	66500057	66500057	8553170	5	119,84,157,130,620,	0,235,891,1317,1730,
#Partially deleted in new
chr15	66500130	66501381	chr15:66500130-66501381	0	-	66500130	66500130	8553170	4	46,84,157,188,	0,162,818,1063,
#Partially deleted in new
chr15	66501007	66504846	chr15:66501007-66504846	0	-	66501007	66501007	8553170	6	497,125,139,107,172,59,	0,780,1604,2050,2350,3780,
#Deleted in new
chr15	66501249	66501318	chr15:66501249-66501318	3	-	66501249	66501249	789624	1	69,	0,
#Partially deleted in new
chr15	66501398	66504845	chr15:66501398-66504845	0	-	66501398	66501398	8553170	5	106,139,107,172,58,	0,1213,1659,1959,3389,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	66501559	66504833	chr15:66501559-66504833	0	-	66501559	66501559	8553170	5	353,139,107,172,46,	0,1052,1498,1798,3228,
#Deleted in new
chr15	66501784	66504845	chr15:66501784-66504845	0	-	66501784	66504790	789624	5	89,139,107,172,58,	0,827,1273,1573,3003,
#Deleted in new
chr15	66502018	66502089	chr15:66502018-66502089	3	-	66502018	66502018	8553170	1	71,	0,
#Deleted in new
chr15	66502019	66502091	chr15:66502019-66502091	3	-	66502019	66502019	789624	1	72,	0,
#Deleted in new
chr15	66502269	66504846	chr15:66502269-66504846	0	-	66502269	66502269	8553170	4	481,107,172,59,	0,788,1088,2518,
#Deleted in new
chr15	66502701	66504846	chr15:66502701-66504846	0	-	66502701	66502701	8553170	3	49,472,59,	0,356,2086,
#Deleted in new
chr15	66502811	66502910	chr15:66502811-66502910	3	-	66502811	66502811	789624	1	99,	0,
#Deleted in new
chr15	66502995	66504846	chr15:66502995-66504846	0	-	66502995	66502995	8553170	2	534,59,	0,1792,
#Deleted in new
chr15	66503242	66503314	chr15:66503242-66503314	3	-	66503242	66503242	789624	1	72,	0,
#Partially deleted in new
chr15	66504958	66550128	chr15:66504958-66550128	3	+	66505338	66546679	0	19	433,52,96,119,200,71,156,72,94,56,106,80,157,29,137,96,113,115,1778,	0,3882,9029,10567,13920,15631,16091,18718,22331,22898,23893,24535,27288,28026,30974,32209,35139,41632,43392,
#Partially deleted in new
chr15	66504958	66548426	chr15:66504958-66548426	1	+	66518900	66546679	0	18	433,96,119,200,71,156,72,94,56,106,80,157,29,137,96,113,115,76,	0,9029,10567,13920,15631,16091,18718,22331,22898,23893,24535,27288,28026,30974,32209,35139,41632,43392,
#Partially deleted in new
chr15	66505082	66549474	chr15:66505082-66549474	1	+	66518900	66546679	0	18	309,147,119,200,71,156,72,94,56,106,80,157,29,137,96,113,115,1124,	0,3663,10443,13796,15507,15967,18594,22207,22774,23769,24411,27164,27902,30850,32085,35015,41508,43268,
#Partially deleted in new
chr15	66505116	66549487	chr15:66505116-66549487	1	+	66518900	66546679	0	19	275,147,96,119,200,71,156,72,94,56,106,80,157,29,137,96,113,115,1137,	0,3629,8871,10409,13762,15473,15933,18560,22173,22740,23735,24377,27130,27868,30816,32051,34981,41474,43234,
#Partially deleted in new
chr15	66505242	66523411	chr15:66505242-66523411	0	-	66505242	66505242	8553170	2	506,44,	0,18125,
#Partially deleted in new
chr15	66505294	66519082	chr15:66505294-66519082	0	+	66505294	66505294	8553170	4	97,147,119,204,	0,3451,10231,13584,
#Partially deleted in new
chr15	66505294	66546705	chr15:66505294-66546705	1	+	66518900	66546679	0	17	97,147,119,200,71,156,72,94,56,106,80,157,29,137,96,113,115,	0,3451,10231,13584,15295,15755,18382,21995,22562,23557,24199,26952,27690,30638,31873,34803,41296,
#Partially deleted in new
chr15	66505299	66520664	chr15:66505299-66520664	0	+	66518900	66520664	789624	5	92,96,119,200,75,	0,8688,10226,13579,15290,
#Partially deleted in new
chr15	66505299	66519129	chr15:66505299-66519129	0	+	66505299	66505299	8553170	4	101,150,119,251,	0,8634,10226,13579,
#Partially deleted in new
chr15	66505325	66520657	chr15:66505325-66520657	0	+	66505325	66505325	8553170	6	66,147,96,119,87,68,	0,3420,8662,10200,13557,15264,
#Partially deleted in new
chr15	66520507	66528933	chr15:66520507-66528933	0	+	66520507	66520507	8553170	6	153,156,72,94,56,82,	0,542,3169,6782,7349,8344,
#Partially deleted in new
chr15	66523510	66528909	chr15:66523510-66528909	0	+	66523510	66523510	8553170	4	238,94,56,58,	0,3779,4346,5341,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	66537168	66547292	chr15:66537168-66547292	0	+	66537168	66546679	789624	4	95,113,115,50,	0,2929,9422,10074,
#Partially deleted in new
chr15	66540152	66546887	chr15:66540152-66546887	0	+	66540152	66546679	789624	2	58,297,	0,6438,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr15	66547178	66565497	chr15:66547178-66565497	3	-	66548489	66565365	789624	13	1427,64,200,127,275,162,55,96,129,110,88,164,250,	0,2862,4483,4864,5805,10543,10803,13827,14008,16337,16732,17497,18069,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	66547467	66565964	chr15:66547467-66565964	1	-	66548489	66561276	789624	12	1138,64,200,127,275,162,55,96,129,110,88,108,	0,2573,4194,4575,5516,10254,10514,13538,13719,16048,16443,18389,
#Partially deleted in new
chr15	66548332	66565979	chr15:66548332-66565979	0	-	66557862	66561276	789624	9	273,127,275,162,129,110,88,164,123,	0,3710,4651,9389,12854,15183,15578,16343,17524,
#Deleted in new
chr15	66563566	66565974	chr15:66563566-66565974	0	-	66563566	66563566	8553170	4	59,230,164,118,	0,202,1109,2290,
#Deleted in new
chr15	66564277	66565893	chr15:66564277-66565893	0	-	66564277	66564277	8553170	3	106,67,37,	0,398,1579,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	66702227	66782848	chr15:66702227-66782848	3	+	66703258	66781535	789624	4	1848,57,78,1852,	0,9440,14193,78769,
#Partially deleted in new
chr15	66703076	66708274	chr15:66703076-66708274	0	+	66703076	66703076	8553170	1	5198,	0,
#Partially deleted in new
chr15	66703258	66781313	chr15:66703258-66781313	0	+	66703258	66717073	789624	5	817,57,78,132,317,	0,8409,13162,13750,77738,
#Partially deleted in new
chr15	66711675	66781313	chr15:66711675-66781313	0	+	66711675	66717073	789624	4	49,78,129,317,	0,4745,5336,69321,
#Partially deleted in new
chr15	66711696	66717537	chr15:66711696-66717537	0	+	66711696	66717073	789624	3	28,78,526,	0,4724,5315,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	66740444	66741151	chr15:66740444-66741151	3	+	66740444	66740444	8553170	1	707,	0,
#Partially deleted in new
chr15	66808403	66810560	chr15:66808403-66810560	7	+	66808403	66808403	16724991	1	2157,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	66860302	66867023	chr15:66860302-66867023	3	+	66860302	66860302	8553170	1	6721,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	66919810	66931755	chr15:66919810-66931755	3	+	66919810	66919810	8553170	2	110,313,	0,11632,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	66931536	66956518	chr15:66931536-66956518	3	-	66931536	66931536	789624	3	288,252,179,	0,10363,24803,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	66984107	67059253	chr15:66984107-67059253	3	-	66984107	66984107	8553170	5	127,42,130,490,114,	0,1334,2260,3050,75032,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	66984107	67000990	chr15:66984107-67000990	0	-	66984107	66984107	8553170	4	127,130,105,178,	0,2260,3050,16705,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	66986367	66994187	chr15:66986367-66994187	0	-	66986367	66986367	8553170	3	130,105,96,	0,790,7724,
#Deleted in new
chr15	67000813	67001085	chr15:67000813-67001085	7	-	67000813	67000813	16724991	1	272,	0,
#Partially deleted in new
chr15	67054704	67065268	chr15:67054704-67065268	1	-	67054704	67054704	8553170	3	205,73,2153,	0,4435,8411,
#Partially deleted in new
chr15	67063762	67166838	chr15:67063762-67166838	0	+	67165003	67166838	789624	4	182,194,132,60,	0,101132,101490,103016,
#Partially deleted in new
chr15	67065844	67195195	chr15:67065844-67195195	3	+	67066154	67190536	0	9	516,194,132,75,51,213,138,145,4783,	0,99050,99408,100934,104709,115396,118882,121520,124568,
#Partially deleted in new
chr15	67077985	67170675	chr15:67077985-67170675	0	+	67077985	67077985	8553170	5	56,194,132,75,122,	0,86909,87267,88793,92568,
#Partially deleted in new
chr15	67098581	67165035	chr15:67098581-67165035	1	+	67098873	67165034	789624	2	443,141,	0,66313,
#Partially deleted in new
chr15	67098678	67170604	chr15:67098678-67170604	0	+	67165003	67170604	789624	5	90,194,132,75,51,	0,66216,66574,68100,71875,
#Partially deleted in new
chr15	67125715	67190762	chr15:67125715-67190762	1	+	67165003	67190536	0	9	269,194,132,75,51,213,138,145,350,	0,39179,39537,41063,44838,55525,59011,61649,64697,
#Partially deleted in new
chr15	67128102	67187447	chr15:67128102-67187447	0	+	67165003	67187447	789624	7	49,194,132,75,51,213,83,	0,36792,37150,38676,42451,53138,59262,
#Partially deleted in new
chr15	67138000	67190894	chr15:67138000-67190894	1	+	67138026	67190536	0	9	100,194,132,75,51,213,138,145,482,	0,26894,27252,28778,32553,43240,46726,49364,52412,
#Partially deleted in new
chr15	67138234	67165356	chr15:67138234-67165356	0	+	67165003	67165356	789624	3	288,194,104,	0,26660,27018,
#Partially deleted in new
chr15	67142733	67146939	chr15:67142733-67146939	3	-	67142733	67142733	8553170	3	353,91,28,	0,3317,4178,
#Partially deleted in new
chr15	67166018	67190762	chr15:67166018-67190762	1	+	67166831	67190536	0	7	175,75,51,213,138,145,350,	0,760,4535,15222,18708,21346,24394,
#Partially deleted in new
chr15	67166530	67181420	chr15:67166530-67181420	0	+	67166831	67181420	789624	3	323,51,180,	0,4023,14710,
#Partially deleted in new
chr15	67166530	67184778	chr15:67166530-67184778	0	+	67166831	67184778	789624	5	161,75,51,213,52,	0,248,4023,14710,18196,
#Partially deleted in new
chr15	67174302	67193180	chr15:67174302-67193180	0	+	67174302	67174302	8553170	2	282,308,	0,18570,
#Partially deleted in new
chr15	67184774	67190841	chr15:67184774-67190841	0	+	67184774	67190536	789624	4	90,111,145,429,	0,2245,2590,5638,
#Partially deleted in new
chr15	67186661	67191521	chr15:67186661-67191521	0	+	67186661	67186661	8553170	2	848,1109,	0,3751,
#Partially deleted in new
chr15	67201032	67254736	chr15:67201032-67254736	3	-	67202820	67254631	789624	10	1866,50,105,97,83,84,90,97,191,178,	0,2515,3011,7529,8429,30781,34946,35375,35597,53526,
#Partially deleted in new
chr15	67201672	67221202	chr15:67201672-67221202	0	-	67201672	67201672	8553170	7	1226,50,105,97,83,52,164,	0,1875,2371,6889,7789,18816,19366,
#Partially deleted in new
chr15	67201706	67254675	chr15:67201706-67254675	1	-	67202820	67236441	789624	10	1192,50,105,97,83,84,90,97,191,262,	0,1841,2337,6855,7755,30107,34272,34701,34923,52707,
#Partially deleted in new
chr15	67202739	67255195	chr15:67202739-67255195	1	-	67202820	67236441	789624	10	159,50,105,97,83,84,90,97,191,59,	0,808,1304,5822,6722,29074,33239,33668,33890,52397,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	67226698	67254654	chr15:67226698-67254654	0	-	67226698	67226698	8553170	6	252,84,90,97,191,96,	0,5115,9280,9709,9931,27860,
#Partially deleted in new
chr15	67231847	67242871	chr15:67231847-67242871	0	-	67231847	67236441	789624	5	50,90,97,191,135,	0,4131,4560,4782,10889,
#Deleted in new
chr15	67232445	67232837	chr15:67232445-67232837	7	+	67232445	67232445	16724991	1	392,	0,
#Partially deleted in new
chr15	67236717	67254654	chr15:67236717-67254654	0	-	67236717	67236717	8553170	2	103,426,	0,17511,
#Partially deleted in new
chr15	67254799	67307224	chr15:67254799-67307224	3	+	67254896	67306828	789624	6	148,123,95,118,117,399,	0,6472,8322,24595,49539,52026,
#Partially deleted in new
chr15	67254800	67501804	chr15:67254800-67501804	0	+	67254896	67344071	789624	17	147,123,129,77,39,106,552,67,84,176,192,121,287,171,123,109,1172,	0,6471,89262,102544,105046,116627,117310,118566,130135,134030,145313,162130,166490,210326,220895,239457,245832,
#Partially deleted in new
chr15	67254830	67501804	chr15:67254830-67501804	1	+	67254896	67500746	789624	21	117,123,95,118,121,129,77,39,552,67,84,176,273,192,121,287,171,123,62,109,1172,	0,6441,8291,24564,82144,89232,102514,105016,117280,118536,130105,134000,140460,145283,162100,166460,210296,220865,235172,239427,245802,
#Partially deleted in new
chr15	67254847	67372170	chr15:67254847-67372170	0	+	67254896	67344071	789624	8	100,123,95,118,117,129,77,60,	0,6424,8274,24547,49491,89215,102497,117263,
#Partially deleted in new
chr15	67254847	67374168	chr15:67254847-67374168	0	+	67254896	67344071	789624	6	100,129,77,39,552,802,	0,89215,102497,104999,117263,118519,
#Partially deleted in new
chr15	67254847	67374168	chr15:67254847-67374168	1	+	67344073	67373498	789624	7	100,123,129,77,39,552,802,	0,6424,89215,102497,104999,117263,118519,
#Partially deleted in new
chr15	67255036	67279451	chr15:67255036-67279451	0	+	67255036	67255036	8553170	4	285,123,95,57,	0,6235,8085,24358,
#Partially deleted in new
chr15	67261301	67372444	chr15:67261301-67372444	0	+	67261301	67357392	789624	4	93,77,39,334,	0,96043,98545,110809,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	67279481	67282240	chr15:67279481-67282240	0	+	67279481	67279481	8553170	2	31,649,	0,2110,
#Partially deleted in new
chr15	67357344	67360095	chr15:67357344-67360095	0	+	67357344	67357344	8553170	2	77,249,	0,2502,
#Partially deleted in new
chr15	67371524	67501803	chr15:67371524-67501803	1	+	67371524	67494341	789624	12	9,552,67,84,176,192,121,287,171,123,109,1171,	0,586,1842,13411,17306,28589,45406,49766,93602,104171,122733,129108,
#Partially deleted in new
chr15	67372113	67501803	chr15:67372113-67501803	1	+	67372113	67500746	789624	12	549,67,84,176,192,121,287,171,123,62,109,1171,	0,1253,12822,16717,28000,44817,49177,93013,103582,117889,122144,128519,
#Partially deleted in new
chr15	67372519	67400226	chr15:67372519-67400226	0	+	67372519	67400226	789624	5	143,67,84,176,113,	0,847,12416,16311,27594,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	67403618	67521636	chr15:67403618-67521636	3	-	67403618	67403618	789624	6	4857,164,284,264,93,91,	0,17716,56073,62875,63343,117927,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	67403618	67521844	chr15:67403618-67521844	0	-	67403618	67403618	789624	6	4857,164,80,218,103,326,	0,17716,26702,62875,115381,117900,
#Partially deleted in new
chr15	67408076	67413538	chr15:67408076-67413538	0	-	67408076	67408076	8553170	2	399,36,	0,5426,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	67421208	67520949	chr15:67421208-67520949	0	-	67421208	67421208	8553170	5	290,80,284,103,171,	0,9112,38483,97791,99570,
#Partially deleted in new
chr15	67490014	67502260	chr15:67490014-67502260	0	+	67490014	67500746	789624	4	50,109,126,368,	0,4243,10618,11878,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	67521067	67530143	chr15:67521067-67530143	3	+	67521248	67526545	789624	2	527,3726,	0,5350,
#Partially deleted in new
chr15	67521684	67526641	chr15:67521684-67526641	0	+	67521684	67521684	8553170	2	520,224,	0,4733,
#Partially deleted in new
chr15	67521694	67526638	chr15:67521694-67526638	1	+	67522187	67526545	789624	2	548,221,	0,4723,
#Partially deleted in new
chr15	67521784	67526541	chr15:67521784-67526541	0	+	67521784	67521784	8553170	2	337,124,	0,4633,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	67541071	67542604	chr15:67541071-67542604	3	-	67541071	67541071	8553170	1	1533,	0,
#Partially deleted in new
chr15	67542708	67807123	chr15:67542708-67807123	3	+	67543335	67806750	0	22	762,49,68,70,41,68,49,65,40,69,82,62,49,74,51,72,30,27,33,62,46,478,	0,7325,20574,38045,43181,44137,50217,57976,88179,103522,103679,115844,121888,149770,150809,160628,185207,205522,205860,226893,229998,263937,
#Partially deleted in new
chr15	67543262	67659356	chr15:67543262-67659356	0	+	67543262	67543262	8553170	13	208,49,68,70,41,68,49,65,40,69,82,62,586,	0,6771,20020,37491,42627,43583,49663,57422,87625,102968,103125,115290,115508,
#Partially deleted in new
chr15	67543330	67807117	chr15:67543330-67807117	1	+	67543335	67806750	0	21	140,49,68,70,41,68,49,65,40,69,82,62,49,74,51,72,27,33,62,46,472,	0,6703,19952,37423,42559,43515,49595,57354,87557,102900,103057,115222,121266,149148,150187,160006,204900,205238,226271,229376,263315,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	67546152	67550075	chr15:67546152-67550075	0	+	67546152	67546152	8553170	2	433,42,	0,3881,
#Partially deleted in new
chr15	67548997	67807111	chr15:67548997-67807111	1	+	67549180	67806750	0	22	210,49,68,70,41,68,49,65,40,69,82,62,49,74,51,72,30,27,33,62,46,466,	0,1036,14285,31756,36892,37848,43928,51687,81890,97233,97390,109555,115599,143481,144520,154339,178918,199233,199571,220604,223709,257648,
#Partially deleted in new
chr15	67563299	67641489	chr15:67563299-67641489	0	+	67563299	67641447	789624	8	51,70,41,68,49,65,40,45,	0,17454,22590,23546,29626,37385,67588,78145,
#Partially deleted in new
chr15	67585741	67807083	chr15:67585741-67807083	0	+	67585741	67585741	8553170	18	189,68,49,65,40,69,82,62,49,74,51,72,30,27,33,62,46,438,	0,1104,7184,14943,45146,60489,60646,72811,78855,106737,107776,117595,142174,162489,162827,183860,186965,220904,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	67585889	67679956	chr15:67585889-67679956	0	+	67585889	67670442	789624	11	41,68,49,65,40,69,82,62,49,28,261,	0,956,7036,14795,44998,60341,60498,72663,78707,84530,93806,
#Partially deleted in new
chr15	67627851	67629135	chr15:67627851-67629135	7	+	67627851	67627851	16724991	2	349,617,	0,667,
#Partially deleted in new
chr15	67640552	67807113	chr15:67640552-67807113	1	+	67642482	67806750	789624	16	71,214,81,69,82,62,49,74,51,72,30,27,33,62,46,468,	0,892,1864,5678,5835,18000,24044,51926,52965,62784,87363,107678,108016,129049,132154,166093,
#Partially deleted in new
chr15	67703357	67769929	chr15:67703357-67769929	0	+	67703357	67769667	789624	3	51,33,328,	0,45211,66244,
#Partially deleted in new
chr15	67717996	67806732	chr15:67717996-67806732	0	+	67717996	67717996	8553170	5	185,33,62,46,87,	0,30572,51605,54710,88649,
#Partially deleted in new
chr15	67748367	67769905	chr15:67748367-67769905	0	+	67748367	67748367	8553170	2	234,304,	0,21234,
#Partially deleted in new
chr15	67819703	67834561	chr15:67819703-67834561	3	+	67819703	67833836	789624	15	42,228,85,310,691,229,306,134,91,108,72,75,75,66,820,	0,2239,4255,5016,6232,7160,7890,8307,9475,10487,11114,12570,12903,13488,14038,
#Partially deleted in new
chr15	67823556	67834538	chr15:67823556-67834538	1	+	67825945	67833836	789624	9	104,2209,91,108,72,75,75,66,797,	0,2379,5622,6634,7261,8717,9050,9635,10185,
#Partially deleted in new
chr15	67825515	67834555	chr15:67825515-67834555	1	+	67825602	67833836	789624	9	110,2209,91,108,72,75,75,66,814,	0,420,3663,4675,5302,6758,7091,7676,8226,
#Partially deleted in new
chr15	67825544	67834555	chr15:67825544-67834555	1	+	67825602	67833836	789624	9	165,2209,91,108,72,75,75,66,814,	0,391,3634,4646,5273,6729,7062,7647,8197,
#Partially deleted in new
chr15	67832724	67873866	chr15:67832724-67873866	3	+	67832724	67832724	8553170	3	55,66,170,	0,467,40972,
#Partially deleted in new
chr15	67833081	67873866	chr15:67833081-67873866	0	+	67833081	67833081	8553170	2	176,170,	0,40615,
#Partially deleted in new
chr15	67834309	67838879	chr15:67834309-67838879	3	-	67834309	67834309	789624	3	1472,344,170,	0,2780,4400,
#Deleted in new
chr15	67974390	67974625	chr15:67974390-67974625	7	-	67974390	67974390	16724991	1	235,	0,
#Partially deleted in new
chr15	67985058	67986288	chr15:67985058-67986288	7	+	67985058	67985058	16724991	3	184,88,262,	0,554,968,
#Partially deleted in new
chr15	68054178	68193846	chr15:68054178-68193846	3	+	68054326	68187835	0	14	172,445,85,48,91,135,106,74,161,131,181,143,38,6305,	0,32127,87767,88111,91637,92387,99411,110552,119553,121458,122295,127033,129451,133363,
#Partially deleted in new
chr15	68054308	68142339	chr15:68054308-68142339	0	+	68054326	68087855	789624	5	42,445,49,85,50,	0,31997,33533,87637,87981,
#Partially deleted in new
chr15	68054317	68142339	chr15:68054317-68142339	0	+	68054326	68057518	789624	6	33,101,52,445,85,50,	0,3162,7080,31988,87628,87972,
#Partially deleted in new
chr15	68054575	68188064	chr15:68054575-68188064	1	+	68055883	68187835	0	15	656,115,445,85,48,91,135,106,74,161,131,181,143,38,523,	0,1223,31730,87370,87714,91240,91990,99014,110155,119156,121061,121898,126636,129054,132966,
#Partially deleted in new
chr15	68146661	68153961	chr15:68146661-68153961	0	+	68146661	68146661	8553170	2	39,372,	0,6928,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	68176537	68181873	chr15:68176537-68181873	0	+	68176537	68176537	8553170	3	117,143,448,	0,4674,4888,
#Partially deleted in new
chr15	68181210	68190758	chr15:68181210-68190758	0	+	68181210	68187591	789624	4	144,690,68,266,	0,6331,7992,9282,
#Partially deleted in new
chr15	68190704	68205298	chr15:68190704-68205298	0	-	68197592	68205298	789624	3	3408,189,54,	0,6735,14540,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	68190705	68206110	chr15:68190705-68206110	3	-	68194014	68199616	789624	4	3407,189,141,866,	0,6734,8835,14539,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	68190792	68206079	chr15:68190792-68206079	1	-	68194064	68205376	789624	2	3320,835,	0,14452,
#Partially deleted in new
chr15	68191129	68229718	chr15:68191129-68229718	3	-	68194105	68229584	789624	3	2983,189,217,	0,6310,38372,
#Partially deleted in new
chr15	68191354	68229677	chr15:68191354-68229677	0	-	68197592	68229584	789624	4	2758,189,115,176,	0,6085,27181,38147,
#Partially deleted in new
chr15	68191681	68198603	chr15:68191681-68198603	0	+	68191681	68191681	8553170	4	125,149,130,971,	0,472,1834,5951,
#Partially deleted in new
chr15	68192056	68205488	chr15:68192056-68205488	1	-	68194014	68205376	789624	4	2056,189,31,244,	0,5383,13064,13188,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	68193802	68206049	chr15:68193802-68206049	0	-	68199630	68205376	789624	4	310,189,141,805,	0,3637,5738,11442,
#Partially deleted in new
chr15	68193803	68197750	chr15:68193803-68197750	0	-	68193803	68193803	8553170	2	309,311,	0,3636,
#Partially deleted in new
chr15	68193803	68205561	chr15:68193803-68205561	1	-	68194014	68205376	789624	5	309,189,141,31,317,	0,3636,5737,11317,11441,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	68193842	68207680	chr15:68193842-68207680	0	-	68193842	68193842	8553170	3	270,189,2436,	0,3597,11402,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	68197439	68199962	chr15:68197439-68199962	0	-	68197439	68199616	789624	2	189,422,	0,2101,
#Partially deleted in new
chr15	68197528	68218573	chr15:68197528-68218573	0	-	68199630	68218573	789624	3	100,141,38,	0,2012,21007,
#Partially deleted in new
chr15	68206991	68229743	chr15:68206991-68229743	3	-	68208139	68229584	789624	7	1419,123,56,189,99,115,242,	0,2645,4271,4683,7298,11544,22510,
#Partially deleted in new
chr15	68207029	68229742	chr15:68207029-68229742	0	-	68211644	68229584	789624	7	1381,123,56,308,99,115,241,	0,2607,4233,4526,7260,11506,22472,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	68207268	68213332	chr15:68207268-68213332	0	-	68207268	68207268	8553170	3	1142,123,2070,	0,2368,3994,
#Partially deleted in new
chr15	68207629	68229672	chr15:68207629-68229672	1	-	68208139	68229584	789624	3	781,123,171,	0,2007,21872,
#Partially deleted in new
chr15	68207840	68218644	chr15:68207840-68218644	0	-	68211870	68218644	789624	6	570,123,56,247,99,109,	0,1796,3422,3834,6449,10695,
#Partially deleted in new
chr15	68207932	68229670	chr15:68207932-68229670	0	-	68209699	68229584	789624	5	478,84,99,115,169,	0,1704,6357,10603,21569,
#Partially deleted in new
chr15	68208039	68229718	chr15:68208039-68229718	1	-	68208139	68229584	789624	6	371,123,56,99,115,217,	0,1597,3223,6250,10496,21462,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	68208066	68257106	chr15:68208066-68257106	1	-	68208139	68256868	789624	7	344,123,56,189,99,115,417,	0,1570,3196,3608,6223,10469,48623,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	68208112	68256997	chr15:68208112-68256997	0	-	68218636	68256868	789624	7	298,123,56,189,99,115,301,	0,1524,3150,3562,6177,10423,48584,
#Partially deleted in new
chr15	68208115	68229677	chr15:68208115-68229677	1	-	68208139	68229584	789624	5	295,123,56,115,176,	0,1521,3147,10420,21386,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	68208142	68248383	chr15:68208142-68248383	0	-	68208142	68208142	8553170	5	268,123,56,99,30,	0,1494,3120,6147,40211,
#Partially deleted in new
chr15	68208148	68229713	chr15:68208148-68229713	0	-	68211711	68229584	789624	7	262,123,56,186,99,115,212,	0,1488,3114,3407,6141,10387,21353,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	68208172	68213143	chr15:68208172-68213143	0	-	68208172	68208172	8553170	4	238,123,56,1588,	0,1464,3090,3383,
#Partially deleted in new
chr15	68208183	68229510	chr15:68208183-68229510	0	-	68211637	68229510	789624	7	227,123,56,88,99,115,9,	0,1453,3079,3372,6106,10352,21318,
#Partially deleted in new
chr15	68208185	68229677	chr15:68208185-68229677	0	-	68211814	68229584	789624	6	225,123,56,189,99,176,	0,1451,3077,3489,6104,21316,
#Partially deleted in new
chr15	68208221	68229703	chr15:68208221-68229703	0	-	68208221	68229584	789624	6	189,123,56,189,115,202,	0,1415,3041,3453,10314,21280,
#Partially deleted in new
chr15	68208326	68229709	chr15:68208326-68229709	1	-	68209685	68229584	789624	7	84,123,56,215,99,115,208,	0,1310,2936,3322,5963,10209,21175,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	68208360	68248393	chr15:68208360-68248393	0	-	68208360	68208360	8553170	6	50,123,56,189,99,40,	0,1276,2902,3314,5929,39993,
#Partially deleted in new
chr15	68209671	68229700	chr15:68209671-68229700	1	-	68209685	68229584	789624	4	88,56,99,199,	0,1591,4618,19830,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	68209702	68257021	chr15:68209702-68257021	0	-	68218636	68256868	789624	5	57,56,99,115,325,	0,1560,4587,8833,46994,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	68213256	68257211	chr15:68213256-68257211	0	-	68213256	68213256	8553170	3	1132,115,515,	0,5279,43440,
#Partially deleted in new
chr15	68213824	68229716	chr15:68213824-68229716	0	-	68213824	68213824	8553170	3	564,115,215,	0,4711,15677,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	68214167	68215608	chr15:68214167-68215608	0	-	68214167	68214167	8553170	1	1441,	0,
#Deleted in new
chr15	68218085	68218642	chr15:68218085-68218642	0	-	68218085	68218085	8553170	1	557,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	68218565	68257131	chr15:68218565-68257131	0	-	68248456	68256868	789624	3	85,128,442,	0,29788,38124,
#Partially deleted in new
chr15	68254548	68254939	chr15:68254548-68254939	7	+	68254548	68254548	16724991	1	391,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	68267791	68277994	chr15:68267791-68277994	3	-	68267791	68267791	8553170	3	162,84,150,	0,7242,10053,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	68267791	68268293	chr15:68267791-68268293	1	-	68267791	68267791	8553170	1	502,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	68277802	68295865	chr15:68277802-68295865	3	+	68278417	68291242	789624	2	863,6259,	0,11804,
#Partially deleted in new
chr15	68279958	68289845	chr15:68279958-68289845	0	+	68289832	68289845	8553170	2	340,239,	0,9648,
#Partially deleted in new
chr15	68289254	68290073	chr15:68289254-68290073	0	+	68289832	68290073	789624	2	107,467,	0,352,
#Partially deleted in new
chr15	68290211	68291311	chr15:68290211-68291311	0	+	68290211	68291242	789624	2	276,602,	0,498,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr15	68296532	68432162	chr15:68296532-68432162	1	-	68303058	68432066	789624	30	6598,114,96,111,87,117,91,90,77,99,208,86,111,143,167,131,204,141,149,145,71,166,145,149,128,115,92,101,112,148,	0,7239,10815,11053,14461,14754,16240,17246,19118,20732,23652,24885,28598,30121,31563,34448,35326,35805,39164,42967,52297,54084,54725,60618,61925,65057,68174,72651,106385,135482,
#Partially deleted in new
chr15	68302766	68432162	chr15:68302766-68432162	3	-	68303058	68432066	789624	30	364,114,96,111,87,114,91,90,77,99,208,86,111,143,167,131,204,141,149,145,71,166,145,149,128,115,92,101,112,148,	0,1005,4581,4819,8227,8523,10006,11012,12884,14498,17418,18651,22364,23887,25329,28214,29092,29571,32930,36733,46063,47850,48491,54384,55691,58823,61940,66417,100151,129248,
#Partially deleted in new
chr15	68331077	68336100	chr15:68331077-68336100	0	-	68331077	68331077	8553170	4	34,204,141,404,	0,781,1260,4619,
#Partially deleted in new
chr15	68331950	68340843	chr15:68331950-68340843	0	-	68331950	68331950	8553170	5	112,141,118,145,51,	0,387,3746,7549,8842,
#Partially deleted in new
chr15	68351255	68365522	chr15:68351255-68365522	0	-	68351255	68351255	8553170	6	147,149,128,115,92,39,	0,5895,7202,10334,13451,14228,
#Partially deleted in new
chr15	68357078	68361641	chr15:68357078-68361641	0	-	68357078	68357078	8553170	3	221,128,52,	0,1379,4511,
#Partially deleted in new
chr15	68357144	68361957	chr15:68357144-68361957	0	-	68357144	68357144	8553170	3	155,128,368,	0,1313,4445,
#Partially deleted in new
chr15	68578968	68727806	chr15:68578968-68727806	3	+	68645159	68725974	789624	12	309,201,117,150,165,117,105,97,113,91,140,1964,	0,66191,116171,131763,132573,134956,135590,136246,139729,140175,140444,146874,
#Partially deleted in new
chr15	68578968	68727803	chr15:68578968-68727803	1	+	68579262	68725974	789624	12	309,201,117,150,165,117,105,97,113,91,140,1961,	0,66191,116171,131763,132573,134956,135590,136246,139729,140175,140444,146874,
#Partially deleted in new
chr15	68616539	68727803	chr15:68616539-68727803	1	+	68645159	68725974	789624	12	75,201,117,150,165,117,105,97,113,91,140,1961,	0,28620,78600,94192,95002,97385,98019,98675,102158,102604,102873,109303,
#Partially deleted in new
chr15	68631987	68727803	chr15:68631987-68727803	1	+	68645159	68725974	789624	12	354,201,117,150,165,117,105,97,113,91,140,1961,	0,13172,63152,78744,79554,81937,82571,83227,86710,87156,87425,93855,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	68749500	68750691	chr15:68749500-68750691	7	+	68749500	68749500	16724991	2	732,157,	0,1034,
#Partially deleted in new
chr15	68778534	68820895	chr15:68778534-68820895	3	-	68780080	68820751	0	7	1608,64,98,199,123,150,198,	0,1875,4421,5862,8878,9235,42163,
#Partially deleted in new
chr15	68778906	68820868	chr15:68778906-68820868	0	-	68787459	68820751	789624	7	1236,64,98,199,83,150,171,	0,1503,4049,5490,8506,8863,41791,
#Deleted in new
chr15	68779323	68781605	chr15:68779323-68781605	0	-	68779323	68779323	8553170	2	819,1196,	0,1086,
#Partially deleted in new
chr15	68779742	68817599	chr15:68779742-68817599	0	-	68779742	68779742	8553170	7	400,64,98,199,123,150,50,	0,667,3213,4654,7670,8027,37807,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	68780071	68792248	chr15:68780071-68792248	0	-	68780071	68780071	8553170	7	71,64,98,199,123,150,3006,	0,338,2884,4325,7341,7698,9171,
#Partially deleted in new
chr15	68780419	68820886	chr15:68780419-68820886	1	-	68784388	68820751	789624	5	51,211,123,150,189,	0,3965,6993,7350,40278,
#Deleted in new
chr15	68782771	68784466	chr15:68782771-68784466	0	-	68782771	68782771	8553170	2	282,70,	0,1625,
#Partially deleted in new
chr15	68784270	68787829	chr15:68784270-68787829	0	-	68784270	68784270	8553170	3	325,123,60,	0,3142,3499,
#Partially deleted in new
chr15	68787178	68820897	chr15:68787178-68820897	0	-	68787178	68787178	8553170	3	357,150,200,	0,591,33519,
#Partially deleted in new
chr15	68787412	68817615	chr15:68787412-68817615	0	-	68787412	68787412	8553170	3	123,150,231,	0,357,29972,
#Deleted in new
chr15	68801849	68801925	chr15:68801849-68801925	3	-	68801849	68801849	5263520	1	76,	0,
#Partially deleted in new
chr15	68812945	68817715	chr15:68812945-68817715	0	-	68812945	68812945	8553170	2	89,331,	0,4439,
#Partially deleted in new
chr15	68818220	68946122	chr15:68818220-68946122	0	+	68818220	68818220	8553170	2	97,524,	0,127378,
#Deleted in new
chr15	68833829	68834749	chr15:68833829-68834749	7	+	68833829	68833829	16724991	1	920,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	68880662	68928941	chr15:68880662-68928941	3	-	68880662	68880662	8553170	3	2624,104,827,	0,43336,47452,
#Partially deleted in new
chr15	68930499	68946811	chr15:68930499-68946811	3	+	68930653	68946587	789624	2	218,1213,	0,15099,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	68930503	69028889	chr15:68930503-69028889	3	+	68930503	68930503	8553170	4	214,104,124,675,	0,44225,96024,97711,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr15	68930524	69062743	chr15:68930524-69062743	1	+	69026531	69056696	789624	17	193,104,124,151,295,235,154,179,183,133,143,45,125,82,100,167,6179,	0,44204,96003,97690,100993,102518,104829,105233,106503,108332,112138,116297,116888,117305,118434,124809,126040,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr15	68930524	69056733	chr15:68930524-69056733	1	+	69026531	69056696	789624	17	193,104,124,151,211,235,154,179,183,133,143,45,125,82,100,167,169,	0,44204,96003,97690,101077,102518,104829,105233,106503,108332,112138,116297,116888,117305,118434,124809,126040,
#Partially deleted in new
chr15	68930633	69056725	chr15:68930633-69056725	1	+	68930688	69056696	789624	16	84,124,151,211,235,154,179,183,133,143,45,125,82,100,167,161,	0,95894,97581,100968,102409,104720,105124,106394,108223,112029,116188,116779,117196,118325,124700,125931,
#Partially deleted in new
chr15	68939793	68946003	chr15:68939793-68946003	0	+	68939793	68939793	8553170	2	60,405,	0,5805,
#Partially deleted in new
chr15	69014694	69057161	chr15:69014694-69057161	1	+	69014735	69056696	789624	16	91,124,151,295,235,154,179,183,133,143,45,125,82,100,167,597,	0,11833,13520,16823,18348,20659,21063,22333,24162,27968,32127,32718,33135,34264,40639,41870,
#Partially deleted in new
chr15	69014697	69056733	chr15:69014697-69056733	3	+	69014735	69056696	789624	16	88,124,151,211,235,154,179,183,133,143,45,125,82,100,167,169,	0,11830,13517,16904,18345,20656,21060,22330,24159,27965,32124,32715,33132,34261,40636,41867,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr15	69014731	69057122	chr15:69014731-69057122	0	+	69014731	69014731	8553170	15	54,124,3598,235,154,179,183,133,143,45,125,82,100,167,558,	0,11796,13483,18311,20622,21026,22296,24125,27931,32090,32681,33098,34227,40602,41833,
#Deleted in new
chr15	69022229	69024176	chr15:69022229-69024176	7	+	69022229	69022229	16724991	1	1947,	0,
#Partially deleted in new
chr15	69031792	69056696	chr15:69031792-69056696	0	+	69031792	69042776	789624	12	20,235,154,179,183,143,45,125,82,100,167,132,	0,1250,3561,3965,5235,10870,15029,15620,16037,17166,23541,24772,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	69037548	69043565	chr15:69037548-69043565	3	-	69037548	69037548	8553170	2	821,51,	0,5966,
#Partially deleted in new
chr15	69045957	69049058	chr15:69045957-69049058	0	+	69045957	69045957	8553170	5	352,45,125,82,100,	0,864,1455,1872,3001,
#Partially deleted in new
chr15	69047088	69055500	chr15:69047088-69055500	0	+	69047088	69047088	8553170	4	449,82,100,167,	0,741,1870,8245,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	69072925	69095807	chr15:69072925-69095807	3	+	69072925	69072925	8553170	5	265,91,200,551,1107,	0,1658,17989,18766,21775,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	69072937	69074866	chr15:69072937-69074866	0	+	69072937	69072937	8553170	2	253,283,	0,1646,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	69072939	69091073	chr15:69072939-69091073	0	+	69072939	69072939	8553170	4	251,91,60,159,	0,1644,16598,17975,
#Partially deleted in new
chr15	69074418	69095820	chr15:69074418-69095820	1	+	69074418	69074418	8553170	4	256,191,173,1105,	0,6767,16496,20297,
#Partially deleted in new
chr15	69074583	69091759	chr15:69074583-69091759	0	+	69074583	69074583	8553170	3	91,200,68,	0,16331,17108,
#Partially deleted in new
chr15	69080849	69091394	chr15:69080849-69091394	0	+	69080849	69080849	8553170	3	116,65,480,	0,462,10065,
#Partially deleted in new
chr15	69080861	69095807	chr15:69080861-69095807	0	+	69080861	69080861	789624	4	515,200,676,1107,	0,10053,10830,13839,
#Partially deleted in new
chr15	69080869	69095255	chr15:69080869-69095255	0	+	69080869	69080869	8553170	4	96,147,74,555,	0,360,10045,13831,
#Partially deleted in new
chr15	69160633	69272199	chr15:69160633-69272199	3	+	69255806	69269244	789624	5	124,91,599,243,3980,	0,49682,95160,100453,107586,
#Partially deleted in new
chr15	69255793	69272217	chr15:69255793-69272217	1	+	69255998	69269244	789624	3	599,243,3998,	0,5293,12426,
#Partially deleted in new
chr15	69260695	69268670	chr15:69260695-69268670	0	+	69260695	69260695	8553170	2	634,451,	0,7524,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	69278674	69288574	chr15:69278674-69288574	1	+	69278674	69278674	8553170	4	195,100,109,167,	0,980,5549,9733,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	69282962	69298758	chr15:69282962-69298758	3	-	69282962	69282962	8553170	4	1177,368,108,281,	0,2956,5459,15515,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	69284161	69295322	chr15:69284161-69295322	3	+	69284161	69284161	8553170	2	171,250,	0,10911,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	69296344	69298763	chr15:69296344-69298763	1	-	69296344	69296344	8553170	1	2419,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	69298946	69407780	chr15:69298946-69407780	3	+	69360080	69403822	789624	9	110,161,166,128,206,127,97,142,4200,	0,38394,61019,80936,85730,90707,98521,101027,104634,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	69359949	69407641	chr15:69359949-69407641	1	+	69360080	69403822	789624	7	182,128,206,127,97,142,4061,	0,19933,24727,29704,37518,40024,43631,
#Partially deleted in new
chr15	69359964	69389743	chr15:69359964-69389743	0	+	69359964	69359964	8553170	5	167,128,118,206,90,	0,19918,22891,24712,29689,
#Partially deleted in new
chr15	69360092	69380366	chr15:69360092-69380366	0	+	69360092	69360092	8553170	2	39,484,	0,19790,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	69391191	69392149	chr15:69391191-69392149	3	+	69391191	69391191	8553170	2	531,163,	0,795,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	69396903	69415029	chr15:69396903-69415029	3	-	69396903	69396903	789624	3	845,55,878,	0,4069,17248,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	69396903	69415029	chr15:69396903-69415029	0	-	69396903	69396903	789624	2	896,878,	0,17248,
#Partially deleted in new
chr15	69403844	69414220	chr15:69403844-69414220	0	-	69403844	69403844	8553170	2	436,69,	0,10307,
#Partially deleted in new
chr15	69414245	69448427	chr15:69414245-69448427	3	+	69414465	69447807	0	23	231,70,129,106,137,110,171,113,122,103,80,120,124,159,158,174,180,312,252,83,82,71,636,	0,1748,3137,7401,7746,8080,8913,11824,12090,14865,21237,21406,21892,22318,24002,25658,26062,26522,30544,31763,32037,32625,33546,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr15	69414272	69448416	chr15:69414272-69448416	0	+	69414465	69426187	789624	19	204,70,129,106,137,110,171,587,103,80,120,124,159,158,252,83,157,71,625,	0,1721,3110,7374,7719,8053,8886,11797,14838,21210,21379,21865,22291,23975,30517,31736,32158,32598,33519,
#Partially deleted in new
chr15	69414292	69448132	chr15:69414292-69448132	1	+	69414465	69447807	789624	23	184,70,129,106,137,110,171,113,122,103,80,120,124,159,158,174,180,312,231,83,79,71,341,	0,1701,3090,7354,7699,8033,8866,11777,12043,14818,21190,21359,21845,22271,23955,25611,26015,26475,30518,31716,31993,32578,33499,
#Partially deleted in new
chr15	69414303	69448425	chr15:69414303-69448425	1	+	69414465	69447807	0	22	173,70,129,106,137,110,171,113,122,103,80,120,124,159,158,174,180,252,83,82,71,634,	0,1690,3079,7343,7688,8022,8855,11766,12032,14807,21179,21348,21834,22260,23944,25600,26004,30486,31705,31979,32567,33488,
#Partially deleted in new
chr15	69414324	69447915	chr15:69414324-69447915	0	+	69414465	69422339	789624	21	152,70,129,106,110,171,113,122,103,80,120,124,159,158,174,180,312,83,82,71,124,	0,1669,3058,7322,8001,8834,11745,12011,14786,21158,21327,21813,22239,23923,25579,25983,26443,31684,31958,32546,33467,
#Partially deleted in new
chr15	69414348	69436232	chr15:69414348-69436232	0	+	69414465	69427474	789624	15	128,70,129,106,137,110,171,42,113,122,130,103,80,120,95,	0,1645,3034,7298,7643,7977,8810,10933,11721,11987,13021,14762,21134,21303,21789,
#Partially deleted in new
chr15	69414348	69448427	chr15:69414348-69448427	1	+	69414465	69447807	8553170	23	128,70,129,106,137,110,171,113,122,103,80,120,124,159,158,174,180,312,252,83,82,71,636,	0,1645,3034,7298,7643,7977,8810,11721,11987,14762,21134,21303,21789,22215,23899,25555,25959,26419,30441,31660,31934,32522,33443,
#Partially deleted in new
chr15	69414358	69448396	chr15:69414358-69448396	1	+	69414465	69447807	789624	22	118,70,129,106,137,110,171,42,113,122,103,80,120,124,159,158,174,252,83,82,71,605,	0,1635,3024,7288,7633,7967,8800,10923,11711,11977,14752,21124,21293,21779,22205,23889,25545,30431,31650,31924,32512,33433,
#Partially deleted in new
chr15	69414380	69421916	chr15:69414380-69421916	0	+	69414380	69414380	8553170	4	96,70,129,270,	0,1613,3002,7266,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	69422908	69436259	chr15:69422908-69436259	0	+	69422908	69422908	8553170	7	421,113,122,103,80,131,111,	0,3161,3427,6202,12574,12743,13240,
#Partially deleted in new
chr15	69425874	69438360	chr15:69425874-69438360	0	+	69425874	69425874	8553170	7	583,103,80,120,124,159,113,	0,3236,9608,9777,10263,10689,12373,
#Deleted in new
chr15	69434465	69435120	chr15:69434465-69435120	7	-	69434465	69434465	16724991	1	655,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	69443604	69447884	chr15:69443604-69447884	0	+	69443604	69443604	8553170	5	1437,83,82,71,93,	0,2404,2678,3266,4187,
#Deleted in new
chr15	69444754	69446950	chr15:69444754-69446950	0	+	69444754	69444754	8553170	4	287,83,82,80,	0,1254,1528,2116,
#Deleted in new
chr15	69446299	69447823	chr15:69446299-69447823	0	+	69446299	69446299	8553170	2	642,32,	0,1492,
#Partially deleted in new
chr15	69452783	69456194	chr15:69452783-69456194	3	+	69452948	69455507	0	4	237,75,118,767,	0,863,2386,2644,
#Partially deleted in new
chr15	69452813	69455547	chr15:69452813-69455547	1	+	69452948	69455507	0	3	207,118,120,	0,2356,2614,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	69452818	69455546	chr15:69452818-69455546	0	+	69452818	69452818	8553170	3	202,1641,119,	0,828,2609,
#Partially deleted in new
chr15	69452883	69455546	chr15:69452883-69455546	1	+	69452948	69455520	789624	2	137,119,	0,2544,
#Partially deleted in new
chr15	69453018	69455546	chr15:69453018-69455546	0	+	69453018	69453018	8553170	3	703,118,119,	0,2151,2409,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	69457940	69458149	chr15:69457940-69458149	3	-	69457940	69457940	8553170	1	209,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	69458521	69461806	chr15:69458521-69461806	3	-	69458521	69458521	8553170	2	299,92,	0,3193,
#Partially deleted in new
chr15	69463025	69565237	chr15:69463025-69565237	0	+	69463025	69463025	8553170	6	100,59,221,187,215,44,	0,1807,5147,100090,100564,102168,
#Partially deleted in new
chr15	69463106	69565235	chr15:69463106-69565235	0	+	69463106	69463106	8553170	6	19,59,191,221,274,42,	0,1726,4323,5066,85247,102087,
#Partially deleted in new
chr15	69463106	69565235	chr15:69463106-69565235	0	+	69463106	69463106	8553170	6	19,191,221,187,215,42,	0,4323,5066,100009,100483,102087,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	69464636	69695748	chr15:69464636-69695748	0	+	69464636	69464636	8553170	11	255,221,187,215,334,165,134,168,95,146,82,	0,3536,98479,98953,100557,106103,164102,207103,212909,219660,231030,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	69464636	69695748	chr15:69464636-69695748	0	+	69464636	69464636	8553170	11	255,221,187,215,334,165,134,168,95,146,82,	0,3536,98479,98953,100557,106103,164102,207103,212909,219660,231030,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	69468035	69571083	chr15:69468035-69571083	0	+	69468035	69468035	8553170	6	57,221,187,215,334,344,	0,137,95080,95554,97158,102704,
#Partially deleted in new
chr15	69548539	69626459	chr15:69548539-69626459	0	+	69548539	69548539	8553170	9	92,265,146,187,215,334,165,265,293,	0,3952,5689,14576,15050,16654,22200,76388,77627,
#Partially deleted in new
chr15	69552715	69563670	chr15:69552715-69563670	0	+	69552715	69552715	8553170	3	41,187,81,	0,10400,10874,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	69558191	69571083	chr15:69558191-69571083	0	+	69558191	69558191	8553170	5	142,187,215,334,344,	0,4924,5398,7002,12548,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	69561722	69571083	chr15:69561722-69571083	1	+	69561722	69561722	789624	5	295,187,215,304,344,	0,1393,1867,3501,9017,
#Partially deleted in new
chr15	69561956	69680396	chr15:69561956-69680396	0	+	69561956	69561956	8553170	9	61,187,215,334,165,136,182,95,186,	0,1159,1633,3237,8783,16369,109769,115589,118254,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	69564723	69565790	chr15:69564723-69565790	3	-	69564723	69564723	8553170	2	565,325,	0,742,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	69565191	69571440	chr15:69565191-69571440	0	+	69565191	69565191	8553170	2	336,701,	0,5548,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	69592128	69612890	chr15:69592128-69612890	1	+	69592128	69592128	8553170	2	185,1936,	0,18826,
#Partially deleted in new
chr15	69592212	69695730	chr15:69592212-69695730	0	+	69592212	69592212	789624	4	101,168,95,64,	0,79527,85333,103454,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	69628783	69840828	chr15:69628783-69840828	3	+	69628783	69628783	8553170	12	153,182,95,146,72,73,194,139,51,124,147,83,	0,42942,48762,55513,69675,71029,86802,123594,127372,164253,167803,211962,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	69670129	69704214	chr15:69670129-69704214	1	+	69670129	69670129	8553170	5	54,168,95,146,8548,	0,1610,7416,14167,25537,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	69671747	69695750	chr15:69671747-69695750	1	+	69671747	69671747	8553170	5	160,95,162,146,84,	0,5798,9399,12549,23919,
#Deleted in new
chr15	69803315	69804046	chr15:69803315-69804046	7	-	69803315	69803315	16724991	1	731,	0,
#Deleted in new
chr15	69820755	69822856	chr15:69820755-69822856	0	-	69820755	69820755	8553170	3	366,152,29,	0,844,2072,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	69820755	69835111	chr15:69820755-69835111	3	-	69820755	69820755	8553170	5	366,64,64,92,490,	0,10823,11919,13646,13866,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	69835233	69843120	chr15:69835233-69843120	1	+	69835233	69835233	789624	5	48,74,83,218,1060,	0,2194,5512,6234,6827,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	69835238	69842030	chr15:69835238-69842030	0	+	69835238	69835238	8553170	4	43,74,83,563,	0,2189,5507,6229,
#Partially deleted in new
chr15	70047789	70098176	chr15:70047789-70098176	3	-	70050096	70096798	789624	20	2415,77,151,148,248,250,77,200,142,153,51,120,17,205,75,63,45,64,101,1402,	0,3601,4584,5437,6648,7259,8508,9669,10360,10873,11620,12740,16664,18224,26743,28306,46742,47788,48371,48985,
#Partially deleted in new
chr15	70047792	70097917	chr15:70047792-70097917	1	-	70050096	70096798	789624	19	2412,77,151,148,248,250,77,200,142,153,51,120,222,75,63,45,64,101,1143,	0,3598,4581,5434,6645,7256,8505,9666,10357,10870,11617,12737,18204,26740,28303,46739,47785,48368,48982,
#Partially deleted in new
chr15	70048274	70097900	chr15:70048274-70097900	1	-	70050096	70096798	789624	20	1930,77,151,148,248,250,77,200,106,153,51,120,17,205,75,63,45,64,101,1126,	0,3116,4099,4952,6163,6774,8023,9184,9911,10388,11135,12255,16179,17739,26258,27821,46257,47303,47886,48500,
#Partially deleted in new
chr15	70048868	70097571	chr15:70048868-70097571	0	-	70055271	70096798	789624	20	1336,77,151,148,248,248,77,185,133,153,51,120,17,205,75,63,45,64,101,797,	0,2522,3505,4358,5569,6180,7429,8605,9290,9794,10541,11661,15585,17145,25664,27227,45663,46709,47292,47906,
#Partially deleted in new
chr15	70048975	70097019	chr15:70048975-70097019	0	-	70054644	70097019	789624	20	1229,77,151,148,243,250,77,200,133,153,51,120,17,205,75,63,45,64,101,245,	0,2415,3398,4251,5462,6073,7322,8483,9183,9687,10434,11554,15478,17038,25557,27120,45556,46602,47185,47799,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	70048976	70058790	chr15:70048976-70058790	0	-	70048976	70048976	8553170	3	2491,4001,1317,	0,3397,8497,
#Partially deleted in new
chr15	70049090	70096851	chr15:70049090-70096851	1	-	70050096	70096798	789624	20	1114,77,151,148,248,250,77,200,142,153,51,120,17,205,105,63,45,64,101,77,	0,2300,3283,4136,5347,5958,7207,8368,9059,9572,10319,11439,15363,16923,25412,27005,45441,46487,47070,47684,
#Partially deleted in new
chr15	70049090	70095950	chr15:70049090-70095950	1	-	70050096	70095598	789624	18	1114,77,151,148,248,250,77,200,142,153,51,120,17,205,75,63,45,373,	0,2300,3283,4136,5347,5958,7207,8368,9059,9572,10319,11439,15363,16923,25442,27005,45441,46487,
#Partially deleted in new
chr15	70049798	70097888	chr15:70049798-70097888	1	-	70050096	70096798	789624	20	406,77,151,148,248,250,77,185,133,153,51,120,17,205,75,63,45,64,101,1114,	0,1592,2575,3428,4639,5250,6499,7675,8360,8864,9611,10731,14655,16215,24734,26297,44733,45779,46362,46976,
#Partially deleted in new
chr15	70049798	70096604	chr15:70049798-70096604	1	-	70050096	70096303	789624	19	406,77,151,148,248,250,77,185,142,153,51,120,17,202,75,63,45,64,444,	0,1592,2575,3428,4639,5250,6499,7675,8351,8864,9611,10731,14655,16215,24734,26297,44733,45779,46362,
#Partially deleted in new
chr15	70049798	70096701	chr15:70049798-70096701	1	-	70050096	70096303	789624	19	406,77,151,148,248,250,77,200,133,153,51,120,17,202,75,63,45,64,541,	0,1592,2575,3428,4639,5250,6499,7660,8360,8864,9611,10731,14655,16215,24734,26297,44733,45779,46362,
#Partially deleted in new
chr15	70049798	70097917	chr15:70049798-70097917	0	-	70055271	70096798	789624	20	406,77,151,148,248,248,77,185,142,153,51,120,17,205,75,63,45,64,101,1143,	0,1592,2575,3428,4639,5250,6499,7675,8351,8864,9611,10731,14655,16215,24734,26297,44733,45779,46362,46976,
#Deleted in new
chr15	70049800	70051505	chr15:70049800-70051505	0	-	70049800	70049800	8553170	2	404,115,	0,1590,
#Partially deleted in new
chr15	70049801	70096752	chr15:70049801-70096752	1	-	70050096	70096679	789624	20	403,77,151,148,248,250,77,200,133,153,51,120,17,205,75,63,45,64,101,76,	0,1589,2572,3425,4636,5247,6496,7657,8357,8861,9608,10728,14652,16212,24731,26294,44730,45776,46359,46875,
#Partially deleted in new
chr15	70049801	70094785	chr15:70049801-70094785	1	-	70050096	70094567	789624	18	403,77,151,148,248,250,77,185,106,153,51,120,17,205,105,63,45,60,	0,1589,2572,3425,4636,5247,6496,7672,8384,8861,9608,10728,14652,16212,24701,26294,44730,44924,
#Partially deleted in new
chr15	70049801	70096437	chr15:70049801-70096437	1	-	70050096	70096303	789624	19	403,77,151,148,248,250,77,200,142,153,51,120,17,205,75,63,45,64,277,	0,1589,2572,3425,4636,5247,6496,7657,8348,8861,9608,10728,14652,16212,24731,26294,44730,45776,46359,
#Partially deleted in new
chr15	70049835	70097866	chr15:70049835-70097866	1	-	70050096	70057476	789624	9	369,77,151,148,248,250,77,46,209,	0,1555,2538,3391,4602,5213,6462,7638,47822,
#Partially deleted in new
chr15	70050096	70096844	chr15:70050096-70096844	1	-	70050096	70096798	789624	20	108,77,151,148,248,250,77,200,133,153,51,120,17,205,75,63,45,64,101,70,	0,1294,2277,3130,4341,4952,6201,7362,8062,8566,9313,10433,14357,15917,24436,25999,44435,45481,46064,46678,
#Partially deleted in new
chr15	70050096	70096798	chr15:70050096-70096798	1	-	70050096	70096798	789624	20	108,77,151,148,248,250,77,185,133,153,51,120,17,205,75,63,45,64,101,24,	0,1294,2277,3130,4341,4952,6201,7377,8062,8566,9313,10433,14357,15917,24436,25999,44435,45481,46064,46678,
#Partially deleted in new
chr15	70050096	70096798	chr15:70050096-70096798	1	-	70050096	70096798	789624	20	108,77,151,148,248,250,77,185,142,153,51,120,17,205,75,63,45,64,101,24,	0,1294,2277,3130,4341,4952,6201,7377,8053,8566,9313,10433,14357,15917,24436,25999,44435,45481,46064,46678,
#Deleted in new
chr15	70053173	70055263	chr15:70053173-70055263	0	-	70053173	70053173	8553170	3	201,248,215,	0,1264,1875,
#Partially deleted in new
chr15	70058090	70058815	chr15:70058090-70058815	0	-	70058090	70058090	8553170	2	201,153,	0,572,
#Partially deleted in new
chr15	70066122	70095588	chr15:70066122-70095588	0	-	70066122	70095572	789624	5	96,75,63,45,199,	0,8410,9973,28409,29267,
#Partially deleted in new
chr15	70066142	70096302	chr15:70066142-70096302	0	-	70066142	70095598	789624	6	76,105,63,45,64,142,	0,8360,9953,28389,29435,30018,
#Partially deleted in new
chr15	70066143	70074595	chr15:70066143-70074595	0	-	70066882	70074595	789624	3	72,322,63,	0,474,8389,
#Deleted in new
chr15	70079371	70079468	chr15:70079371-70079468	3	-	70079371	70079371	5263520	1	97,	0,
#Deleted in new
chr15	70097404	70097848	chr15:70097404-70097848	0	-	70097404	70097404	8553170	2	35,290,	0,154,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	70193235	70193341	chr15:70193235-70193341	3	+	70193235	70193235	8553170	1	106,	0,
#Deleted in new
chr15	70195637	70198509	chr15:70195637-70198509	3	-	70195637	70195637	8553170	3	155,223,191,	0,1220,2681,
#Partially deleted in new
chr15	70321575	70326742	chr15:70321575-70326742	3	+	70321575	70321575	8553170	2	122,405,	0,4762,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	70503906	70505928	chr15:70503906-70505928	3	-	70503906	70503906	789624	2	219,20,	0,2002,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	70570957	70586606	chr15:70570957-70586606	3	-	70570957	70570957	789624	2	2474,732,	0,14917,
#Deleted in new
chr15	70602123	70602516	chr15:70602123-70602516	7	+	70602123	70602123	16724991	1	393,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	70615546	70616567	chr15:70615546-70616567	3	+	70615546	70615546	789624	1	1021,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	70635248	70637314	chr15:70635248-70637314	3	+	70635248	70635248	789624	1	2066,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr15	70654553	70763593	chr15:70654553-70763593	3	-	70657055	70763407	789624	19	2574,66,153,2739,53,37,99,33,108,69,38,182,107,71,58,65,89,134,264,	0,5597,10108,12170,16485,17411,21939,22554,23545,25054,28204,29711,32986,33196,35900,36745,40463,44973,108776,
#Partially deleted in new
chr15	70656801	70702308	chr15:70656801-70702308	1	-	70657055	70701915	789624	19	326,66,153,2739,53,37,99,33,108,69,38,182,107,71,58,65,89,134,432,	0,3349,7860,9922,14237,15163,19691,20306,21297,22806,25956,27463,30738,30948,33652,34497,38215,42725,45075,
#Partially deleted in new
chr15	70656931	70702308	chr15:70656931-70702308	1	-	70657055	70701915	789624	19	196,66,153,2739,53,31,99,33,108,69,38,182,107,71,58,65,89,134,432,	0,3219,7730,9792,14107,15039,19561,20176,21167,22676,25826,27333,30608,30818,33522,34367,38085,42595,44945,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	70656933	70661696	chr15:70656933-70661696	0	-	70656933	70656933	8553170	2	194,1546,	0,3217,
#Partially deleted in new
chr15	70656934	70664944	chr15:70656934-70664944	0	-	70656934	70656934	8553170	3	193,66,283,	0,3216,7727,
#Partially deleted in new
chr15	70656976	70763430	chr15:70656976-70763430	1	-	70657055	70763407	789624	16	151,66,153,2739,53,37,99,33,108,69,71,58,65,89,134,101,	0,3174,7685,9747,14062,14988,19516,20131,21122,22631,30773,33477,34322,38040,42550,106353,
#Partially deleted in new
chr15	70668917	70702281	chr15:70668917-70702281	0	-	70668917	70701915	789624	15	545,53,37,99,108,69,38,182,107,71,58,65,89,134,405,	0,2121,3047,7575,9181,10690,13840,15347,18622,18832,21536,22381,26099,30609,32959,
#Partially deleted in new
chr15	70669093	70671973	chr15:70669093-70671973	0	-	70669093	70669093	8553170	2	369,935,	0,1945,
#Partially deleted in new
chr15	70671877	70687643	chr15:70671877-70687643	0	-	70671877	70671877	8553170	8	124,99,33,108,69,38,182,104,	0,4615,5230,6221,7730,10880,12387,15662,
#Partially deleted in new
chr15	70671877	70699666	chr15:70671877-70699666	0	-	70671877	70671877	8553170	13	124,99,33,108,69,38,182,107,71,58,65,89,140,	0,4615,5230,6221,7730,10880,12387,15662,15872,18576,19421,23139,27649,
#Partially deleted in new
chr15	70676306	70684400	chr15:70676306-70684400	0	-	70676306	70676306	8553170	6	285,33,108,69,38,136,	0,801,1792,3301,6451,7958,
#Partially deleted in new
chr15	70678098	70680034	chr15:70678098-70680034	0	-	70678098	70678098	8553170	2	108,427,	0,1509,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	70681536	70684303	chr15:70681536-70684303	0	-	70681536	70681536	8553170	3	492,38,39,	0,1221,2728,
#Partially deleted in new
chr15	70684356	70703275	chr15:70684356-70703275	0	-	70684356	70703203	789624	8	90,107,71,58,65,89,134,135,	0,3183,3393,6097,6942,10660,15170,18784,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	70748931	70754177	chr15:70748931-70754177	3	+	70748931	70748931	8553170	2	364,108,	0,5138,
#Deleted in new
chr15	70758268	70758856	chr15:70758268-70758856	3	-	70758268	70758268	8553170	1	588,	0,
#Partially deleted in new
chr15	70768010	70778868	chr15:70768010-70778868	3	-	70768010	70768010	8553170	2	353,87,	0,10771,
#Deleted in new
chr15	70791012	70791486	chr15:70791012-70791486	7	+	70791012	70791012	16724991	1	474,	0,
#Partially deleted in new
chr15	70796596	70802684	chr15:70796596-70802684	7	-	70796596	70796596	16724991	3	535,212,86,	0,943,6002,
#Deleted in new
chr15	70796630	70797099	chr15:70796630-70797099	5	-	70796630	70796630	16724991	1	469,	0,
#Partially deleted in new
chr15	70796656	70802688	chr15:70796656-70802688	5	-	70796656	70796656	16724991	4	475,109,154,90,	0,627,883,5942,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	70829129	70854159	chr15:70829129-70854159	3	-	70832051	70854088	0	3	3987,211,271,	0,7165,24759,
#Partially deleted in new
chr15	70832881	70853458	chr15:70832881-70853458	0	-	70832881	70832975	789624	3	235,211,112,	0,3413,20465,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	70848882	70849770	chr15:70848882-70849770	3	-	70848882	70848882	8553170	2	216,539,	0,349,
#Deleted in new
chr15	70851426	70854121	chr15:70851426-70854121	1	-	70851638	70854088	0	2	294,233,	0,2462,
#Deleted in new
chr15	70851426	70853525	chr15:70851426-70853525	0	-	70851426	70851426	8553170	2	294,179,	0,1920,
#Deleted in new
chr15	70851488	70854008	chr15:70851488-70854008	0	-	70852217	70854008	789624	2	844,120,	0,2400,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr15	70853238	71053657	chr15:70853238-71053657	1	+	70873205	71049612	789624	17	231,316,57,88,103,204,67,144,62,148,84,164,238,186,110,154,4249,	0,19669,40345,42610,47683,51313,58293,65811,83522,110546,126862,130855,155140,156568,159565,183940,196170,
#Partially deleted in new
chr15	70853377	70911589	chr15:70853377-70911589	0	+	70904722	70911589	789624	6	92,57,88,103,204,58,	0,40206,42471,47544,51174,58154,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	70853377	70904700	chr15:70853377-70904700	0	+	70853377	70853377	8553170	3	92,316,149,	0,19530,51174,
#Deleted in new
chr15	70858713	70860162	chr15:70858713-70860162	7	+	70858713	70858713	16724991	1	1449,	0,
#Partially deleted in new
chr15	70881341	70892785	chr15:70881341-70892785	3	-	70882453	70892272	789624	3	1309,148,942,	0,1419,10502,
#Partially deleted in new
chr15	70882299	70892410	chr15:70882299-70892410	0	-	70882453	70892410	789624	3	351,148,38,	0,461,10073,
#Partially deleted in new
chr15	70892442	71050095	chr15:70892442-71050095	1	+	70898394	71049612	789624	17	500,57,88,89,103,204,67,144,62,148,84,164,238,186,110,154,687,	0,1141,3406,5924,8479,12109,19089,26607,44318,71342,87658,91651,115936,117364,120361,144736,156966,
#Partially deleted in new
chr15	70892442	71050071	chr15:70892442-71050071	0	+	70892894	70898398	789624	17	500,57,88,89,103,204,67,144,62,148,84,164,238,186,110,154,663,	0,1141,3406,5924,8479,12109,19089,26607,44318,71342,87658,91651,115936,117364,120361,144736,156966,
#Partially deleted in new
chr15	70892470	70904671	chr15:70892470-70904671	0	+	70892894	70894655	789624	6	472,57,98,88,103,120,	0,1113,2101,3378,8451,12081,
#Partially deleted in new
chr15	70892594	71050075	chr15:70892594-71050075	0	+	70892894	70904562	789624	15	348,57,88,204,67,144,62,148,84,164,238,186,110,154,667,	0,989,3254,11957,18937,26455,44166,71190,87506,91499,115784,117212,120209,144584,156814,
#Partially deleted in new
chr15	70892625	71049853	chr15:70892625-71049853	1	+	70892894	71049612	789624	16	317,72,88,103,204,67,144,62,148,84,164,238,186,110,154,445,	0,958,3223,8296,11926,18906,26424,44135,71159,87475,91468,115753,117181,120178,144553,156783,
#Partially deleted in new
chr15	70892634	71050075	chr15:70892634-71050075	3	+	70892894	71049612	789624	16	308,57,88,103,204,67,144,62,148,84,164,238,186,110,154,667,	0,949,3214,8287,11917,18897,26415,44126,71150,87466,91459,115744,117172,120169,144544,156774,
#Partially deleted in new
chr15	70892795	70919101	chr15:70892795-70919101	0	+	70892894	70904650	789624	5	147,57,204,67,52,	0,788,11756,18736,26254,
#Partially deleted in new
chr15	70892844	70900951	chr15:70892844-70900951	0	+	70892894	70894655	789624	6	98,57,184,88,89,30,	0,739,1727,3004,5522,8077,
#Partially deleted in new
chr15	70892847	70900953	chr15:70892847-70900953	0	+	70892894	70900953	789624	5	95,57,88,126,32,	0,736,3001,7609,8074,
#Partially deleted in new
chr15	70892848	70984552	chr15:70892848-70984552	0	+	70892848	70892848	8553170	10	94,57,88,103,204,144,62,148,84,459,	0,735,3000,8073,11703,26201,43912,70936,87252,91245,
#Partially deleted in new
chr15	70892861	70904700	chr15:70892861-70904700	0	+	70892894	70894655	789624	5	81,57,184,88,149,	0,722,1710,2987,11690,
#Partially deleted in new
chr15	70893239	70911561	chr15:70893239-70911561	0	+	70904722	70911561	789624	6	102,57,88,103,204,30,	0,344,2609,7682,11312,18292,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr15	70895538	71049634	chr15:70895538-71049634	1	+	70963893	71049612	789624	18	162,88,89,229,103,204,73,67,144,62,148,84,164,238,186,110,154,226,	0,310,2828,4815,5383,9013,13065,15993,23511,41222,68246,84562,88555,112840,114268,117265,141640,153870,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	70895600	70904596	chr15:70895600-70904596	0	+	70895600	70895600	8553170	4	336,89,103,45,	0,2766,5321,8951,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr15	70895638	71049629	chr15:70895638-71049629	0	+	70895638	70895638	8553170	17	97,88,98,126,103,204,67,144,62,148,84,164,238,186,110,154,221,	0,210,4560,4818,5283,8913,15893,23411,41122,68146,84462,88455,112740,114168,117165,141540,153770,
#Partially deleted in new
chr15	70902533	70963911	chr15:70902533-70963911	0	+	70902533	70902533	8553170	6	32,204,67,144,62,127,	0,2018,8998,16516,34227,61251,
#Partially deleted in new
chr15	70907449	70963883	chr15:70907449-70963883	0	+	70907449	70907449	8553170	6	47,147,67,144,62,99,	0,395,4082,11600,29311,56335,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	70918206	70963939	chr15:70918206-70963939	0	+	70918206	70918206	8553170	3	987,62,155,	0,18554,45578,
#Partially deleted in new
chr15	70936486	70984205	chr15:70936486-70984205	0	+	70963893	70984205	789624	5	174,62,148,84,112,	0,274,27298,43614,47607,
#Partially deleted in new
chr15	70936527	71050075	chr15:70936527-71050075	1	+	70980115	71049612	789624	8	295,84,164,238,186,110,154,667,	0,43573,47566,71851,73279,76276,100651,112881,
#Partially deleted in new
chr15	70936534	70984258	chr15:70936534-70984258	0	+	70963893	70984258	789624	5	126,62,148,84,165,	0,226,27250,43566,47559,
#Partially deleted in new
chr15	70936534	71008448	chr15:70936534-71008448	0	+	70963893	71008448	789624	5	126,62,148,164,70,	0,226,27250,47559,71844,
#Partially deleted in new
chr15	70936534	71008438	chr15:70936534-71008438	0	+	70963893	71008438	789624	5	288,148,84,164,60,	0,27250,43566,47559,71844,
#Partially deleted in new
chr15	70936615	71008617	chr15:70936615-71008617	0	+	70936615	70936615	8553170	4	207,148,164,239,	0,27169,47478,71763,
#Partially deleted in new
chr15	70980098	71009978	chr15:70980098-71009978	0	+	70980098	70980098	8553170	5	86,164,238,67,172,	0,3995,28280,29479,29708,
#Deleted in new
chr15	71048776	71050075	chr15:71048776-71050075	0	+	71048776	71048776	8553170	2	71,667,	0,632,
#Deleted in new
chr15	71063100	71063989	chr15:71063100-71063989	7	-	71063100	71063100	16724991	1	889,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr15	71096951	71783383	chr15:71096951-71783383	3	+	71141527	71777374	789624	18	55,108,70,365,448,103,137,205,176,97,276,130,205,174,174,180,145,6152,	0,44497,57911,118083,145697,159661,314735,563578,631597,634169,640780,648154,649886,651469,660950,668068,674112,680280,
#Partially deleted in new
chr15	71110243	71115467	chr15:71110243-71115467	0	-	71110243	71110243	8553170	3	2051,227,544,	0,3293,4680,
#Partially deleted in new
chr15	71110243	71115494	chr15:71110243-71115494	0	-	71110243	71110243	8553170	4	1183,147,129,366,	0,1904,3391,4885,
#Partially deleted in new
chr15	71110249	71115500	chr15:71110249-71115500	3	-	71111150	71112282	789624	4	1177,147,129,372,	0,1898,3385,4879,
#Deleted in new
chr15	71110559	71111426	chr15:71110559-71111426	0	-	71110559	71110559	8553170	2	497,195,	0,672,
#Partially deleted in new
chr15	71111270	71115473	chr15:71111270-71115473	0	-	71111270	71111270	8553170	4	156,147,129,550,	0,877,2364,3653,
#Partially deleted in new
chr15	71115664	71215238	chr15:71115664-71215238	0	+	71141527	71215238	789624	4	34,108,70,204,	0,25784,39198,99370,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	71147649	71189029	chr15:71147649-71189029	3	-	71147649	71147649	8553170	5	141,6,111,82,214,	0,24502,35456,37775,41166,
#Deleted in new
chr15	71164769	71165415	chr15:71164769-71165415	7	-	71164769	71164769	16724991	1	646,	0,
#Partially deleted in new
chr15	71167007	71189042	chr15:71167007-71189042	0	-	71167007	71167007	789624	2	182,227,	0,21808,
#Partially deleted in new
chr15	71167024	71189016	chr15:71167024-71189016	1	-	71167024	71167024	789624	3	165,102,201,	0,18380,21791,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	71183938	71189016	chr15:71183938-71189016	0	-	71183938	71183938	8553170	3	274,82,201,	0,1486,4877,
#Partially deleted in new
chr15	71185620	71189025	chr15:71185620-71189025	1	-	71185620	71185620	8553170	2	1972,210,	0,3195,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	71332119	71352460	chr15:71332119-71352460	3	+	71332119	71332119	8553170	3	253,339,267,	0,16032,20074,
#Deleted in new
chr15	71341157	71341712	chr15:71341157-71341712	7	-	71341157	71341157	16724991	1	555,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	71342323	71348471	chr15:71342323-71348471	1	+	71342323	71342323	8553170	3	182,196,320,	0,359,5828,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	71547227	71738217	chr15:71547227-71738217	0	+	71547227	71547227	8553170	5	254,205,176,97,486,	0,113302,181321,183893,190504,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	71547235	71778626	chr15:71547235-71778626	1	+	71547409	71777374	789624	12	246,205,176,97,276,130,205,174,174,180,145,1395,	0,113294,181313,183885,190496,197870,199602,201185,210666,217784,223828,229996,
#Deleted in new
chr15	71547279	71549832	chr15:71547279-71549832	3	-	71547279	71547279	8553170	3	191,162,232,	0,328,2321,
#Partially deleted in new
chr15	71547281	71783279	chr15:71547281-71783279	1	+	71547409	71780934	789624	4	200,197,4,2732,	0,113248,233260,233266,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	71660454	71767651	chr15:71660454-71767651	0	+	71660454	71660454	8553170	10	280,176,97,276,130,205,174,174,180,953,	0,68094,70666,77277,84651,86383,87966,97447,104565,106244,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	71660529	71733932	chr15:71660529-71733932	0	+	71660529	71660529	8553170	2	205,5384,	0,68019,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	71792637	71818259	chr15:71792637-71818259	1	+	71811784	71817684	789624	10	85,187,70,127,104,222,176,247,106,708,	0,14380,16638,18845,19128,19317,19698,20751,21374,24914,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	71810553	71818259	chr15:71810553-71818259	3	+	71810743	71817684	0	8	308,127,104,222,176,247,106,708,	0,929,1212,1401,1782,2835,3458,6998,
#Deleted in new
chr15	71810591	71814929	chr15:71810591-71814929	1	+	71810743	71814121	0	7	270,127,104,222,176,247,918,	0,891,1174,1363,1744,2797,3420,
#Partially deleted in new
chr15	71817459	71818248	chr15:71817459-71818248	0	+	71817459	71817459	8553170	2	356,35,	0,754,
#Partially deleted in new
chr15	71822288	72118081	chr15:71822288-72118081	3	-	71826579	72046563	789624	42	4755,143,203,124,132,106,129,193,62,112,48,192,117,224,143,113,100,1572,320,150,123,111,81,123,40,144,76,120,196,142,122,135,117,90,127,98,57,100,63,95,911,402,	0,5595,7820,26556,27747,28964,29843,32088,37446,40211,53502,55751,57432,58046,61305,65715,71390,75172,77398,78902,80652,81640,82637,94081,111381,113052,116563,129488,137612,145695,155882,168814,172180,177562,185537,188061,196750,198629,205442,210205,223435,295391,
#Partially deleted in new
chr15	71825991	71898838	chr15:71825991-71898838	0	-	71826579	71898838	789624	19	1052,143,203,124,132,106,129,193,62,112,48,192,117,224,143,113,213,100,1378,	0,1892,4117,22853,24044,25261,26140,28385,33743,36508,49799,52048,53729,54343,57602,62012,66973,67687,71469,
#Partially deleted in new
chr15	71826048	71854412	chr15:71826048-71854412	0	-	71826579	71854412	789624	9	995,143,203,54,124,132,106,129,36,	0,1835,4060,21366,22796,23987,25204,26083,28328,
#Partially deleted in new
chr15	71826271	72117768	chr15:71826271-72117768	1	-	71827031	72046563	789624	42	768,143,203,124,132,106,129,193,62,112,48,192,117,224,143,113,100,1572,320,150,123,111,81,123,40,144,76,120,196,142,122,135,117,90,127,98,57,100,63,95,911,89,	0,1612,3837,22573,23764,24981,25860,28105,33463,36228,49519,51768,53449,54063,57322,61732,67407,71189,73415,74919,76669,77657,78654,90098,107398,109069,112580,125505,133629,141712,151899,164831,168197,173579,181554,184078,192767,194646,201459,206222,219452,291408,
#Partially deleted in new
chr15	71826579	72117712	chr15:71826579-72117712	1	-	71826579	72046563	789624	42	464,143,203,124,132,106,129,193,62,112,48,192,117,224,143,113,100,1572,320,150,123,111,81,123,40,144,76,120,196,142,122,135,117,90,127,98,57,100,63,95,914,28,	0,1304,3529,22265,23456,24673,25552,27797,33155,35920,49211,51460,53141,53755,57014,61424,67099,70881,73107,74611,76361,77349,78346,89790,107090,108761,112272,125197,133321,141404,151591,164523,167889,173271,181246,183770,192459,194338,201151,205914,219144,291105,
#Partially deleted in new
chr15	71827933	71852187	chr15:71827933-71852187	0	-	71827933	71852187	789624	5	93,203,124,106,56,	0,2175,20911,23319,24198,
#Partially deleted in new
chr15	71830205	71852356	chr15:71830205-71852356	0	-	71830205	71830205	8553170	5	106,124,132,106,225,	0,18639,19830,21047,21926,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	71858569	71858686	chr15:71858569-71858686	7	+	71858569	71858569	16724991	1	117,	0,
#Partially deleted in new
chr15	71883700	71888607	chr15:71883700-71888607	0	-	71883700	71883700	8553170	2	36,604,	0,4303,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr15	71889471	72046636	chr15:71889471-72046636	0	-	71889471	71889471	8553170	25	3706,100,1572,320,150,123,111,81,123,40,144,76,120,196,142,122,135,117,90,127,98,100,63,95,913,	0,4207,7989,10215,11719,13469,14457,15454,26898,44198,45869,49380,62305,70429,78512,88699,101631,104997,110379,118354,120878,131446,138259,143022,156252,
#Partially deleted in new
chr15	71893461	71897813	chr15:71893461-71897813	0	-	71893461	71893461	8553170	2	317,353,	0,3999,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr15	71896889	72117999	chr15:71896889-72117999	1	-	71897456	72010387	789624	23	2143,320,150,123,111,81,123,40,144,76,195,196,142,122,135,117,90,127,98,100,63,95,320,	0,2797,4301,6051,7039,8036,19480,36780,38451,41962,54812,63011,71094,81281,94213,97579,102961,110936,113460,124028,130841,135604,220790,
#Partially deleted in new
chr15	71904010	71953692	chr15:71904010-71953692	0	-	71904010	71904010	8553170	7	29,81,40,144,76,120,49,	0,915,29659,31330,34841,47766,49633,
#Partially deleted in new
chr15	71935139	71959955	chr15:71935139-71959955	0	-	71935139	71935139	8553170	5	345,76,158,120,55,	0,3712,15094,16637,24761,
#Partially deleted in new
chr15	71935442	71939011	chr15:71935442-71939011	0	-	71935442	71935442	8553170	2	42,160,	0,3409,
#Partially deleted in new
chr15	71938762	71968078	chr15:71938762-71968078	0	-	71938762	71938762	8553170	3	165,196,95,	0,21138,29221,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	71951731	71960403	chr15:71951731-71960403	0	-	71951731	71951731	8553170	2	165,503,	0,8169,
#Partially deleted in new
chr15	71958499	72118081	chr15:71958499-72118081	0	-	71958499	71958499	8553170	14	1597,142,122,135,117,90,127,98,57,100,63,95,911,402,	0,9484,19671,32603,35969,41351,49326,51850,60539,62418,69231,73994,87224,159180,
#Partially deleted in new
chr15	71958516	72118081	chr15:71958516-72118081	1	-	71959892	72046563	789624	15	1580,142,122,135,117,90,127,98,57,100,63,95,911,204,167,	0,9467,19654,32586,35952,41334,49309,51833,60522,62401,69214,73977,87207,159163,159398,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	71972205	72040265	chr15:71972205-72040265	3	+	71972205	71972205	8553170	5	112,96,68,175,330,	0,21487,26807,64309,67730,
#Partially deleted in new
chr15	72010377	72045982	chr15:72010377-72045982	0	-	72027781	72045982	789624	5	70,57,100,63,259,	0,8661,10540,17353,35346,
#Partially deleted in new
chr15	72041193	72041653	chr15:72041193-72041653	7	-	72041193	72041193	16724991	1	460,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	72045182	72045367	chr15:72045182-72045367	3	+	72045182	72045182	8553170	1	185,	0,
#Partially deleted in new
chr15	72046141	72118223	chr15:72046141-72118223	0	-	72046141	72046563	789624	2	493,67,	0,72015,
#Partially deleted in new
chr15	72046343	72118577	chr15:72046343-72118577	0	-	72046343	72046563	789624	2	291,273,	0,71961,
#Partially deleted in new
chr15	72114257	72140962	chr15:72114257-72140962	3	+	72139623	72140262	0	2	286,1386,	0,25319,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	72118295	72143688	chr15:72118295-72143688	1	+	72139623	72140262	0	2	169,4112,	0,21281,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	72134640	72135436	chr15:72134640-72135436	7	+	72134640	72134640	16724991	1	796,	0,
#Partially deleted in new
chr15	72140503	72155459	chr15:72140503-72155459	3	-	72140503	72140503	8553170	2	116,277,	0,14679,
#Partially deleted in new
chr15	72159806	72197785	chr15:72159806-72197785	3	-	72162008	72197771	789624	12	2206,105,211,145,57,72,99,104,76,58,93,55,	0,2466,3459,3806,5547,6825,7187,7929,8684,9132,10040,37924,
#Deleted in new
chr15	72159807	72163833	chr15:72159807-72163833	0	-	72159807	72159807	8553170	3	2205,105,568,	0,2465,3458,
#Deleted in new
chr15	72161481	72163789	chr15:72161481-72163789	0	-	72161481	72161481	8553170	4	531,105,211,177,	0,791,1784,2131,
#Deleted in new
chr15	72161826	72163855	chr15:72161826-72163855	0	-	72161826	72161826	8553170	4	35,105,211,243,	0,446,1439,1786,
#Deleted in new
chr15	72161907	72163868	chr15:72161907-72163868	0	-	72161907	72161907	8553170	4	105,105,98,256,	0,365,1358,1705,
#Partially deleted in new
chr15	72162759	72166702	chr15:72162759-72166702	0	-	72162759	72162759	8553170	5	117,211,145,57,71,	0,506,853,2594,3872,
#Partially deleted in new
chr15	72163694	72170379	chr15:72163694-72170379	0	-	72163694	72170348	789624	9	63,57,72,99,104,76,58,93,42,	0,1659,2937,3299,4041,4796,5244,6152,6643,
#Deleted in new
chr15	72166645	72170074	chr15:72166645-72170074	0	-	72166645	72169959	789624	6	58,99,104,76,58,228,	0,348,1090,1845,2293,3201,
#Deleted in new
chr15	72166678	72169143	chr15:72166678-72169143	0	-	72166678	72166678	8553170	5	25,99,104,76,205,	0,315,1057,1812,2260,
#Deleted in new
chr15	72166993	72170335	chr15:72166993-72170335	0	-	72166993	72170214	789624	6	99,104,76,58,93,126,	0,742,1497,1945,2853,3216,
#Deleted in new
chr15	72167808	72170311	chr15:72167808-72170311	0	-	72169517	72170214	789624	6	31,76,58,147,93,102,	0,682,1130,1608,2038,2401,
#Partially deleted in new
chr15	72169261	72176098	chr15:72169261-72176098	0	-	72169261	72169261	8553170	4	302,93,119,77,	0,585,6447,6760,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	72173564	72176562	chr15:72173564-72176562	0	-	72173564	72173564	8553170	3	363,119,31,	0,2144,2967,
#Partially deleted in new
chr15	72199028	72231386	chr15:72199028-72231386	3	-	72199649	72219097	0	11	728,182,167,153,151,271,187,132,92,167,487,	0,1445,3993,7699,8098,9592,10644,11318,18380,19915,31871,
#Partially deleted in new
chr15	72199028	72231386	chr15:72199028-72231386	1	-	72199649	72219097	789624	10	728,182,167,153,151,271,172,17,167,271,	0,1445,3425,7699,8098,9592,10644,18455,19915,32087,
#Partially deleted in new
chr15	72199028	72231386	chr15:72199028-72231386	1	-	72199649	72221201	0	11	728,182,167,153,151,271,187,132,167,117,271,	0,1445,3425,7699,8098,9592,10644,11318,19915,22139,32087,
#Deleted in new
chr15	72199028	72204559	chr15:72199028-72204559	0	-	72199028	72199028	8553170	3	728,182,2106,	0,1445,3425,
#Partially deleted in new
chr15	72199031	72231206	chr15:72199031-72231206	1	-	72199649	72219097	0	11	725,182,167,153,151,271,187,132,92,167,91,	0,1442,3422,7696,8095,9589,10641,11315,18377,19912,32084,
#Partially deleted in new
chr15	72199031	72231171	chr15:72199031-72231171	1	-	72199649	72219097	0	11	725,182,167,153,151,271,187,132,92,167,276,	0,1442,3990,7696,8095,9589,10641,11315,18377,19912,31864,
#Partially deleted in new
chr15	72199031	72231822	chr15:72199031-72231822	1	-	72199649	72219097	789624	8	725,182,167,153,151,222,132,131,	0,1442,3990,7696,8095,9589,19947,32660,
#Deleted in new
chr15	72199035	72202053	chr15:72199035-72202053	0	-	72199035	72199035	8553170	2	721,1580,	0,1438,
#Partially deleted in new
chr15	72199104	72231190	chr15:72199104-72231190	0	-	72210422	72219097	789624	11	652,182,167,153,151,271,187,132,167,117,75,	0,1369,3349,7623,8022,9516,10568,11242,19839,22063,32011,
#Partially deleted in new
chr15	72199589	72231113	chr15:72199589-72231113	1	-	72199649	72219097	0	12	167,182,167,153,151,271,187,132,92,167,117,218,	0,884,3432,7138,7537,9031,10083,10757,17819,19354,21578,31306,
#Partially deleted in new
chr15	72199628	72229722	chr15:72199628-72229722	1	-	72199649	72219097	0	11	128,182,167,153,151,271,187,132,92,167,176,	0,845,3393,7099,7498,8992,10044,10718,17780,19315,29918,
#Partially deleted in new
chr15	72200507	72228676	chr15:72200507-72228676	0	-	72200507	72219097	789624	10	148,167,153,151,271,187,132,92,167,100,	0,2514,6220,6619,8113,9165,9839,16901,18436,28069,
#Partially deleted in new
chr15	72201866	72206798	chr15:72201866-72206798	0	-	72201866	72201866	8553170	2	754,71,	0,4861,
#Partially deleted in new
chr15	72202532	72231225	chr15:72202532-72231225	0	-	72207271	72219097	789624	9	88,153,151,275,187,132,92,167,110,	0,4195,4594,6084,7140,7814,14876,16411,28583,
#Partially deleted in new
chr15	72202689	72206854	chr15:72202689-72206854	0	-	72202689	72202689	8553170	2	499,127,	0,4038,
#Deleted in new
chr15	72206258	72207167	chr15:72206258-72207167	0	-	72206258	72206258	8553170	2	622,41,	0,868,
#Deleted in new
chr15	72206674	72208962	chr15:72206674-72208962	0	-	72206674	72206674	8553170	3	206,151,342,	0,452,1946,
#Partially deleted in new
chr15	72208665	72210026	chr15:72208665-72210026	0	-	72208665	72208665	8553170	2	226,354,	0,1007,
#Partially deleted in new
chr15	72209505	72217451	chr15:72209505-72217451	0	-	72209505	72209505	8553170	3	354,132,43,	0,841,7903,
#Partially deleted in new
chr15	72209732	72219425	chr15:72209732-72219425	0	-	72209732	72219097	789624	5	127,132,92,167,36,	0,614,7676,9211,9657,
#Partially deleted in new
chr15	72209750	72222531	chr15:72209750-72222531	0	-	72209750	72219097	789624	5	109,132,92,167,82,	0,596,7658,9193,12699,
#Partially deleted in new
chr15	72209782	72231680	chr15:72209782-72231680	0	-	72209782	72219097	789624	5	77,132,92,167,82,	0,564,7626,9161,21816,
#Partially deleted in new
chr15	72210059	72231190	chr15:72210059-72231190	0	-	72210059	72210059	8553170	4	419,92,167,75,	0,7349,8884,21056,
#Partially deleted in new
chr15	72217408	72231624	chr15:72217408-72231624	0	-	72217408	72219097	789624	3	92,167,301,	0,1535,13915,
#Partially deleted in new
chr15	72218942	72231819	chr15:72218942-72231819	0	-	72218942	72219097	789624	3	168,68,221,	0,12381,12656,
#Partially deleted in new
chr15	72241180	72260623	chr15:72241180-72260623	0	-	72241454	72260623	789624	3	377,49,90,	0,18427,19353,
#Partially deleted in new
chr15	72241180	72272621	chr15:72241180-72272621	3	-	72241454	72267477	789624	24	377,85,64,80,70,73,110,49,68,66,126,93,96,54,211,150,67,91,61,95,78,197,265,229,	0,720,976,1439,8064,8839,9664,10026,12256,13274,15284,16167,16856,18427,19297,20377,23374,23900,24232,24716,25564,26294,29842,31212,
#Partially deleted in new
chr15	72241181	72267523	chr15:72241181-72267523	1	-	72242633	72267477	789624	21	376,85,64,80,73,110,49,68,66,126,93,96,54,211,150,67,91,61,95,78,49,	0,719,975,1438,8838,9663,10025,12255,13273,15283,16166,16855,18426,19296,20376,23373,23899,24231,24715,25563,26293,
#Partially deleted in new
chr15	72241181	72271287	chr15:72241181-72271287	1	-	72241454	72267477	789624	23	376,85,64,80,70,73,110,49,68,66,126,93,96,54,211,150,67,91,61,95,78,197,265,	0,719,975,1438,8063,8838,9663,10025,12255,13273,15283,16166,16855,18426,19296,20376,23373,23899,24231,24715,25563,26293,29841,
#Partially deleted in new
chr15	72241181	72267649	chr15:72241181-72267649	0	-	72241181	72241181	8553170	19	376,85,64,80,73,49,68,66,126,93,96,54,151,150,67,91,61,95,905,	0,719,975,1438,8838,10025,12255,13273,15283,16166,16855,18426,19356,20376,23373,23899,24231,24715,25563,
#Partially deleted in new
chr15	72241181	72267523	chr15:72241181-72267523	1	-	72250077	72267477	789624	21	376,85,64,80,70,73,49,68,66,126,93,96,54,211,150,67,91,61,95,78,49,	0,719,975,1438,8063,8838,10025,12255,13273,15283,16166,16855,18426,19296,20376,23373,23899,24231,24715,25563,26293,
#Partially deleted in new
chr15	72241196	72250265	chr15:72241196-72250265	0	-	72241196	72241196	8553170	5	361,85,64,80,246,	0,704,960,1423,8823,
#Partially deleted in new
chr15	72241198	72267028	chr15:72241198-72267028	0	-	72241198	72241198	8553170	22	359,85,64,80,70,73,110,49,68,49,66,126,93,96,54,151,150,67,91,61,95,284,	0,702,958,1421,8046,8821,9646,10008,12238,12515,13256,15266,16149,16838,18409,19339,20359,23356,23882,24214,24698,25546,
#Partially deleted in new
chr15	72241198	72265929	chr15:72241198-72265929	0	-	72242633	72265929	789624	19	359,85,64,80,73,110,49,68,66,126,93,96,54,151,150,67,91,61,33,	0,702,958,1421,8821,9646,10008,12238,13256,15266,16149,16838,18409,19339,20359,23356,23882,24214,24698,
#Partially deleted in new
chr15	72241198	72271051	chr15:72241198-72271051	0	-	72242633	72267477	789624	22	359,85,64,80,73,113,49,68,66,126,93,96,54,211,150,67,91,61,95,78,197,29,	0,702,958,1421,8821,9646,10008,12238,13256,15266,16149,16838,18409,19279,20359,23356,23882,24214,24698,25546,26276,29824,
#Partially deleted in new
chr15	72241198	72265930	chr15:72241198-72265930	0	-	72241454	72265930	789624	20	359,85,64,80,70,73,113,49,68,66,126,93,96,54,151,150,67,91,61,34,	0,702,958,1421,8046,8821,9646,10008,12238,13256,15266,16149,16838,18409,19339,20359,23356,23882,24214,24698,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	72241217	72245787	chr15:72241217-72245787	0	-	72241217	72241217	8553170	4	340,85,64,3168,	0,683,939,1402,
#Partially deleted in new
chr15	72241222	72271215	chr15:72241222-72271215	0	-	72258125	72267477	789624	21	335,85,64,80,73,49,68,66,126,93,96,49,155,150,67,91,61,95,78,197,193,	0,678,934,1397,8797,9984,12214,13232,15242,16125,16814,18385,19311,20335,23332,23858,24190,24674,25522,26252,29800,
#Partially deleted in new
chr15	72241274	72257420	chr15:72241274-72257420	0	-	72242659	72257420	789624	8	283,85,64,80,68,66,126,73,	0,626,882,1345,12162,13180,15190,16073,
#Partially deleted in new
chr15	72241286	72251351	chr15:72241286-72251351	0	-	72241286	72241286	8553170	6	271,85,64,80,73,145,	0,614,870,1333,8733,9920,
#Partially deleted in new
chr15	72242205	72267536	chr15:72242205-72267536	0	-	72242205	72267477	789624	20	15,80,70,73,113,49,68,66,126,93,96,54,211,150,67,91,61,95,78,62,	0,414,7039,7814,8639,9001,11231,12249,14259,15142,15831,17402,18272,19352,22349,22875,23207,23691,24539,25269,
#Partially deleted in new
chr15	72242619	72254481	chr15:72242619-72254481	0	-	72254043	72254481	789624	8	80,70,73,113,49,68,121,27,	0,6625,7400,8225,8587,10817,11330,11835,
#Partially deleted in new
chr15	72242673	72257435	chr15:72242673-72257435	0	-	72250077	72257435	789624	5	26,73,49,68,88,	0,7346,8533,10763,14674,
#Deleted in new
chr15	72249127	72250448	chr15:72249127-72250448	0	-	72249127	72249127	8553170	2	187,429,	0,892,
#Partially deleted in new
chr15	72260593	72266782	chr15:72260593-72266782	0	-	72265376	72266782	789624	7	95,150,67,91,204,95,38,	0,964,3961,4487,4676,5303,6151,
#Partially deleted in new
chr15	72265428	72272999	chr15:72265428-72272999	0	-	72265428	72267477	789624	6	45,95,78,197,77,104,	0,468,1316,2046,5594,7467,
#Partially deleted in new
chr15	72266745	72319946	chr15:72266745-72319946	3	-	72287264	72319874	8553170	15	77,197,82,156,144,81,63,150,133,144,80,129,49,83,334,	0,729,4277,20491,21562,21792,22122,22392,22629,22881,23193,23381,38000,49099,52867,
#Partially deleted in new
chr15	72266746	72272571	chr15:72266746-72272571	0	-	72266746	72267477	789624	4	76,197,265,291,	0,728,4276,5534,
#Partially deleted in new
chr15	72267631	72272498	chr15:72267631-72272498	0	-	72267631	72267631	8553170	3	40,259,106,	0,3391,4761,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	72278866	72351794	chr15:72278866-72351794	3	+	72278866	72278866	8553170	3	165,1412,1571,	0,66519,71357,
#Partially deleted in new
chr15	72284726	72320129	chr15:72284726-72320129	3	-	72287264	72319874	0	13	1616,156,144,81,63,150,133,144,80,129,49,83,517,	0,2510,3581,3811,4141,4411,4648,4900,5212,5400,20019,31118,34886,
#Partially deleted in new
chr15	72284726	72375981	chr15:72284726-72375981	3	-	72320626	72375972	789624	16	1616,156,144,63,150,133,144,129,49,83,1090,105,91,66,93,262,	0,2510,3581,4141,4411,4648,4900,5400,20019,31118,34886,60719,61508,70832,71798,90993,
#Partially deleted in new
chr15	72285183	72319787	chr15:72285183-72319787	0	-	72290003	72319787	789624	12	1159,156,144,81,63,150,133,144,80,129,83,175,	0,2053,3124,3354,3684,3954,4191,4443,4755,4943,30661,34429,
#Partially deleted in new
chr15	72285904	72306315	chr15:72285904-72306315	1	-	72287264	72304794	0	11	438,156,144,81,147,133,144,80,129,49,175,	0,1332,2403,2633,3233,3470,3722,4034,4222,18841,20236,
#Partially deleted in new
chr15	72285950	72306292	chr15:72285950-72306292	1	-	72287264	72292252	0	13	392,156,144,81,63,150,133,144,80,129,68,49,152,	0,1286,2357,2587,2917,3187,3424,3676,3988,4176,6247,18795,20190,
#Partially deleted in new
chr15	72286247	72319882	chr15:72286247-72319882	1	-	72287264	72319874	0	12	95,156,144,63,150,133,144,80,129,49,83,270,	0,989,2060,2620,2890,3127,3379,3691,3879,18498,29597,33365,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr15	72340918	72376476	chr15:72340918-72376476	3	-	72344076	72375972	0	14	3222,105,91,184,73,87,181,133,102,111,47,66,93,757,	0,4527,5316,5608,6767,7129,8160,9599,10214,12149,12772,14640,15606,34801,
#Partially deleted in new
chr15	72343856	72345882	chr15:72343856-72345882	0	-	72343856	72343856	8553170	2	284,437,	0,1589,
#Partially deleted in new
chr15	72343886	72345889	chr15:72343886-72345889	0	-	72343886	72343886	8553170	3	254,105,213,	0,1559,1790,
#Partially deleted in new
chr15	72343907	72376003	chr15:72343907-72376003	0	-	72353158	72375972	789624	13	233,105,91,184,73,87,181,133,102,111,66,93,284,	0,1538,2327,2619,3778,4140,5171,6610,7225,9160,11651,12617,31812,
#Partially deleted in new
chr15	72343925	72375993	chr15:72343925-72375993	1	-	72344076	72375972	789624	14	215,105,91,184,73,87,181,133,102,111,47,66,126,274,	0,1520,2309,2601,3760,4122,5153,6592,7207,9142,9765,11633,12599,31794,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	72345229	72345804	chr15:72345229-72345804	0	-	72345229	72345229	8553170	2	321,128,	0,447,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	72345233	72375844	chr15:72345233-72375844	0	-	72346315	72375844	789624	11	317,91,87,181,133,102,111,47,66,93,125,	0,1001,2814,3845,5284,5899,7834,8457,10325,11291,30486,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	72345282	72360453	chr15:72345282-72360453	0	-	72345282	72345282	8553170	10	268,91,73,87,181,133,102,111,1934,3929,	0,952,2403,2765,3796,5235,5850,7785,8408,11242,
#Partially deleted in new
chr15	72345410	72375993	chr15:72345410-72375993	1	-	72345441	72375972	789624	13	140,91,184,73,87,181,133,102,111,47,66,93,274,	0,824,1116,2275,2637,3668,5107,5722,7657,8280,10148,11114,30309,
#Partially deleted in new
chr15	72345976	72375972	chr15:72345976-72375972	0	-	72362452	72375972	789624	8	349,87,133,102,66,93,91,253,	0,2071,4541,5156,9582,10548,16399,29743,
#Partially deleted in new
chr15	72346131	72376003	chr15:72346131-72376003	0	-	72351214	72375972	789624	10	194,184,73,87,181,133,102,66,93,284,	0,395,1554,1916,2947,4386,5001,9427,10393,29588,
#Partially deleted in new
chr15	72346234	72375975	chr15:72346234-72375975	0	-	72346661	72375972	789624	11	91,184,87,181,133,102,111,47,66,93,256,	0,292,1813,2844,4283,4898,6833,7456,9324,10290,29485,
#Partially deleted in new
chr15	72350579	72376420	chr15:72350579-72376420	0	-	72350579	72350579	8553170	6	71,102,66,93,112,146,	0,553,4979,5945,25140,25695,
#Partially deleted in new
chr15	72351131	72375953	chr15:72351131-72375953	0	-	72355917	72375953	789624	6	103,111,66,67,93,234,	0,1936,4427,4778,5393,24588,
#Partially deleted in new
chr15	72355443	72375969	chr15:72355443-72375969	0	-	72355443	72355443	8553170	3	181,93,250,	0,1081,20276,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	72369958	72375989	chr15:72369958-72375989	1	-	72370581	72375972	789624	2	730,270,	0,5761,
#Duplicated in new
chr15	72376112	72378788	chr15:72376112-72378788	3	+	72376112	72376112	789624	1	2676,	0,
#Deleted in new
chr15	72379214	72379710	chr15:72379214-72379710	7	-	72379214	72379214	16724991	1	496,	0,
#Partially deleted in new
chr15	72398272	72408029	chr15:72398272-72408029	3	+	72398326	72407893	789624	5	135,256,150,132,339,	0,380,8329,8813,9418,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	72398301	72408027	chr15:72398301-72408027	1	+	72406035	72407893	8553170	5	106,70,150,132,337,	0,7668,8300,8784,9389,
#Partially deleted in new
chr15	72398304	72408029	chr15:72398304-72408029	0	+	72398326	72406706	789624	4	103,150,132,339,	0,8297,8781,9386,
#Partially deleted in new
chr15	72398308	72408029	chr15:72398308-72408029	1	+	72398326	72406706	789624	3	99,150,339,	0,8293,9382,
#Partially deleted in new
chr15	72407777	72474209	chr15:72407777-72474209	3	-	72407777	72407777	789624	4	68,143,177,335,	0,1596,13647,66097,
#Partially deleted in new
chr15	72450656	72451474	chr15:72450656-72451474	7	+	72450656	72450656	16724991	1	818,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	72465127	72466262	chr15:72465127-72466262	3	-	72465127	72465127	8553170	1	1135,	0,
#Partially deleted in new
chr15	72472843	72475168	chr15:72472843-72475168	1	-	72472843	72472843	8553170	1	2325,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr15	72474325	72602985	chr15:72474325-72602985	3	+	72474639	72583292	0	14	689,68,145,93,56,67,107,43,72,131,58,261,113,19778,	0,43741,70494,80945,81526,87157,89068,92237,92780,95851,97782,106405,107749,108882,
#Partially deleted in new
chr15	72474489	72561547	chr15:72474489-72561547	0	+	72474639	72555331	789624	5	525,68,93,56,65,	0,43577,80781,81362,86993,
#Partially deleted in new
chr15	72474644	72563500	chr15:72474644-72563500	0	+	72474644	72563500	789624	4	370,68,67,107,	0,43422,86838,88749,
#Partially deleted in new
chr15	72474935	72544923	chr15:72474935-72544923	0	+	72474935	72474935	8553170	4	79,68,68,104,	0,21855,43131,69884,
#Partially deleted in new
chr15	72561451	72582118	chr15:72561451-72582118	0	+	72561451	72561451	8553170	3	98,261,44,	0,19279,20623,
#Partially deleted in new
chr15	72566369	72580779	chr15:72566369-72580779	0	+	72566369	72566369	8553170	5	236,72,144,58,49,	0,736,3794,5738,14361,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	72580557	72583290	chr15:72580557-72583290	0	+	72580557	72580557	8553170	3	434,113,83,	0,1517,2650,
#Deleted in new
chr15	72580730	72583551	chr15:72580730-72583551	0	+	72580730	72583292	789624	3	147,113,344,	0,1344,2477,
#Deleted in new
chr15	72581471	72586559	chr15:72581471-72586559	0	+	72581471	72581471	8553170	2	716,3352,	0,1736,
#Deleted in new
chr15	72587216	72587313	chr15:72587216-72587313	3	+	72587216	72587216	5263520	1	97,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	72589690	72591845	chr15:72589690-72591845	3	+	72589690	72589690	8553170	1	2155,	0,
#Deleted in new
chr15	72604398	72605008	chr15:72604398-72605008	7	-	72604398	72604398	16724991	2	171,255,	0,355,
#Partially deleted in new
chr15	72605182	72612326	chr15:72605182-72612326	7	+	72605182	72605182	16724991	11	153,43,79,39,51,82,113,421,49,73,91,	0,392,2331,3272,3577,3728,3906,4422,5121,6507,7053,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	72608480	72636888	chr15:72608480-72636888	0	-	72608480	72608480	789624	3	273,69,103,	0,24857,28305,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	72608636	72636919	chr15:72608636-72636919	3	-	72608636	72608636	789624	4	117,118,69,134,	0,7493,24701,28149,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	72615809	72618250	chr15:72615809-72618250	3	+	72615809	72615809	8553170	1	2441,	0,
#Deleted in new
chr15	72638820	72640125	chr15:72638820-72640125	7	+	72638820	72638820	16724991	5	75,66,40,120,81,	0,295,586,944,1224,
#Partially deleted in new
chr15	72654737	72666394	chr15:72654737-72666394	3	+	72654737	72666342	789624	18	84,120,81,39,51,82,107,87,108,88,509,69,76,92,103,104,154,180,	0,1774,3820,4756,5056,5207,5385,6526,6721,7021,7514,8299,9698,10206,10858,11044,11237,11477,
#Deleted in new
chr15	72658557	72660171	chr15:72658557-72660171	0	+	72658557	72658557	8553170	4	81,39,233,49,	0,936,1236,1565,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	72664576	72664799	chr15:72664576-72664799	3	+	72664576	72664576	8553170	1	223,	0,
#Partially deleted in new
chr15	72675781	72686149	chr15:72675781-72686149	3	-	72676053	72676374	789624	3	606,179,332,	0,4233,10036,
#Partially deleted in new
chr15	72682265	72682904	chr15:72682265-72682904	7	-	72682265	72682265	16724991	2	157,159,	0,480,
#Partially deleted in new
chr15	72686178	72738475	chr15:72686178-72738475	1	+	72724584	72737587	789624	15	73,80,64,112,73,59,128,55,69,153,172,70,142,202,998,	0,23521,26065,29112,30599,36610,38349,41761,43437,45126,45376,48934,49646,50583,51299,
#Partially deleted in new
chr15	72686185	72738087	chr15:72686185-72738087	0	+	72686227	72709738	789624	15	66,80,64,112,73,59,128,55,69,153,172,70,142,202,610,	0,23514,26058,29105,30592,36603,38342,41754,43430,45119,45369,48927,49639,50576,51292,
#Partially deleted in new
chr15	72686186	72738476	chr15:72686186-72738476	3	+	72686227	72737587	789624	16	65,52,80,64,112,73,54,128,55,69,153,172,70,142,202,999,	0,8990,23513,26057,29104,30591,36607,38341,41753,43429,45118,45368,48926,49638,50575,51291,
#Partially deleted in new
chr15	72686193	72727994	chr15:72686193-72727994	0	+	72686227	72722812	789624	9	58,52,80,64,112,73,59,128,55,	0,8983,23506,26050,29097,30584,36595,38334,41746,
#Partially deleted in new
chr15	72686203	72731458	chr15:72686203-72731458	0	+	72686227	72722812	789624	10	48,52,80,64,73,54,128,55,69,154,	0,8973,23496,26040,30574,36590,38324,41736,43412,45101,
#Partially deleted in new
chr15	72686206	72722821	chr15:72686206-72722821	0	+	72686227	72695202	789624	8	45,103,52,80,64,112,73,28,	0,255,8970,23493,26037,29084,30571,36587,
#Partially deleted in new
chr15	72686206	72724657	chr15:72686206-72724657	0	+	72686227	72709738	789624	7	45,80,64,112,73,59,130,	0,23493,26037,29084,30571,36582,38321,
#Partially deleted in new
chr15	72686206	72737824	chr15:72686206-72737824	0	+	72686227	72709769	789624	17	45,52,58,80,64,112,73,54,128,55,69,153,172,70,142,202,347,	0,8970,18217,23493,26037,29084,30571,36587,38321,41733,43409,45098,45348,48906,49618,50555,51271,
#Partially deleted in new
chr15	72686206	72724575	chr15:72686206-72724575	0	+	72686227	72698017	789624	9	45,52,46,80,64,112,73,59,48,	0,8970,11785,23493,26037,29084,30571,36582,38321,
#Partially deleted in new
chr15	72686219	72737570	chr15:72686219-72737570	0	+	72686227	72686461	789624	16	345,52,80,64,112,73,54,128,55,69,153,172,70,142,202,93,	0,8957,23480,26024,29071,30558,36574,38308,41720,43396,45085,45335,48893,49605,50542,51258,
#Partially deleted in new
chr15	72686236	72731611	chr15:72686236-72731611	0	+	72686236	72731611	789624	11	15,52,80,64,112,73,54,128,55,153,57,	0,8940,23463,26007,29054,30541,36557,38291,41703,45068,45318,
#Partially deleted in new
chr15	72686389	72716851	chr15:72686389-72716851	0	+	72686516	72716851	789624	6	175,52,74,64,112,74,	0,8787,23316,25854,28901,30388,
#Partially deleted in new
chr15	72686749	72722848	chr15:72686749-72722848	0	+	72686749	72686749	8553170	7	91,52,80,64,112,73,55,	0,8427,22950,25494,28541,30028,36044,
#Deleted in new
chr15	72716827	72717355	chr15:72716827-72717355	0	+	72716827	72716827	8553170	2	23,326,	0,202,
#Partially deleted in new
chr15	72722829	72735645	chr15:72722829-72735645	0	+	72722829	72722829	8553170	5	18,128,153,172,533,	0,1698,8475,8725,12283,
#Partially deleted in new
chr15	72731556	72735214	chr15:72731556-72735214	0	+	72731556	72731556	8553170	2	170,102,	0,3556,
#Partially deleted in new
chr15	72731681	72737523	chr15:72731681-72737523	0	+	72731681	72737523	789624	5	45,106,142,202,46,	0,3395,4143,5080,5796,
#Partially deleted in new
chr15	72735516	72737092	chr15:72735516-72737092	0	+	72735516	72735516	8553170	2	450,331,	0,1245,
#Partially deleted in new
chr15	72751368	72783785	chr15:72751368-72783785	3	-	72752340	72783691	789624	7	1524,99,197,121,63,226,327,	0,4187,4882,9038,20414,23503,32090,
#Partially deleted in new
chr15	72751368	72783731	chr15:72751368-72783731	0	-	72783454	72783691	789624	7	1524,99,197,121,63,226,486,	0,4187,4882,9038,20414,23503,31877,
#Partially deleted in new
chr15	72751368	72783776	chr15:72751368-72783776	0	-	72760418	72783691	789624	5	1527,99,197,121,318,	0,4187,4882,9038,32090,
#Partially deleted in new
chr15	72751368	72756267	chr15:72751368-72756267	0	-	72756098	72756267	789624	4	1524,99,180,17,	0,4187,4613,4882,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	72751371	72758610	chr15:72751371-72758610	0	-	72751371	72751371	8553170	2	1521,3055,	0,4184,
#Partially deleted in new
chr15	72752201	72755999	chr15:72752201-72755999	1	-	72752340	72755999	789624	3	691,99,18,	0,3354,3780,
#Partially deleted in new
chr15	72752429	72783623	chr15:72752429-72783623	0	-	72752857	72783623	789624	5	466,121,63,226,165,	0,7977,19353,22442,31029,
#Partially deleted in new
chr15	72752634	72783715	chr15:72752634-72783715	0	-	72783454	72783691	789624	4	261,99,121,470,	0,2921,7772,30611,
#Partially deleted in new
chr15	72755635	72783617	chr15:72755635-72783617	0	-	72755635	72755635	8553170	4	19,121,226,159,	0,4771,19236,27823,
#Partially deleted in new
chr15	72756260	72785846	chr15:72756260-72785846	0	-	72756260	72774964	789624	5	187,121,63,226,198,	0,4146,15522,18611,29388,
#Partially deleted in new
chr15	72760222	72783728	chr15:72760222-72783728	0	-	72760222	72760222	8553170	2	305,270,	0,23236,
#Partially deleted in new
chr15	72760248	72775114	chr15:72760248-72775114	0	-	72760248	72760248	8553170	3	279,63,243,	0,11534,14623,
#Partially deleted in new
chr15	72760417	72783628	chr15:72760417-72783628	0	-	72783454	72783628	789624	3	110,63,383,	0,11365,22828,
#Partially deleted in new
chr15	72760442	72783730	chr15:72760442-72783730	0	-	72783454	72783691	789624	2	85,429,	0,22859,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	72782834	72798199	chr15:72782834-72798199	3	+	72782834	72782834	789624	3	2362,172,196,	0,4587,15169,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	72785011	72792963	chr15:72785011-72792963	0	+	72785011	72785011	8553170	3	185,172,408,	0,2410,7544,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	72858353	72887128	chr15:72858353-72887128	3	+	72858353	72858353	8553170	2	185,553,	0,28222,
#Deleted in new
chr15	72899398	72900260	chr15:72899398-72900260	7	-	72899398	72899398	16724991	1	862,	0,
#Partially deleted in new
chr15	73051709	73305205	chr15:73051709-73305205	3	+	73052675	73302696	0	30	255,322,318,276,154,137,155,121,160,155,149,139,50,148,111,195,96,224,139,108,195,33,69,148,239,93,159,264,137,2593,	0,774,64830,70815,74707,84181,124693,126597,184637,192634,197350,197873,201690,202972,207056,208561,214606,218300,218606,220745,222101,222982,226421,231254,236603,237436,241680,246638,249611,250903,
#Partially deleted in new
chr15	73052483	73305206	chr15:73052483-73305206	1	+	73052675	73302696	0	29	322,318,276,154,137,155,121,160,155,149,139,50,148,111,195,96,224,139,108,195,33,69,148,239,93,159,264,137,2594,	0,64056,70041,73933,83407,123919,125823,183863,191860,196576,197099,200916,202198,206282,207787,213832,217526,217832,219971,221327,222208,225647,230480,235829,236662,240906,245864,248837,250129,
#Partially deleted in new
chr15	73052609	73302718	chr15:73052609-73302718	1	+	73052675	73302696	0	28	196,318,276,154,137,155,121,160,155,149,139,50,148,111,195,96,224,139,108,195,69,148,239,93,159,264,137,106,	0,63930,69915,73807,83281,123793,125697,183737,191734,196450,196973,200790,202072,206156,207661,213706,217400,217706,219845,221201,225521,230354,235703,236536,240780,245738,248711,250003,
#Partially deleted in new
chr15	73052609	73302718	chr15:73052609-73302718	1	+	73052675	73302696	0	28	196,318,276,154,137,155,121,160,155,149,139,50,148,111,195,96,224,139,108,195,33,69,148,239,93,264,137,106,	0,63930,69915,73807,83281,123793,125697,183737,191734,196450,196973,200790,202072,206156,207661,213706,217400,217706,219845,221201,222082,225521,230354,235703,236536,245738,248711,250003,
#Partially deleted in new
chr15	73122633	73126623	chr15:73122633-73126623	0	+	73122633	73122633	8553170	2	167,207,	0,3783,
#Partially deleted in new
chr15	73135984	73305198	chr15:73135984-73305198	0	+	73135984	73302696	789624	24	43,155,121,220,155,149,139,50,148,111,195,96,176,139,108,195,69,148,239,93,159,264,137,2586,	0,40418,42322,100302,108359,113075,113598,117415,118697,122781,124286,130331,134073,134331,136470,137826,142146,146979,152328,153161,157405,162363,165336,166628,
#Deleted in new
chr15	73143235	73143518	chr15:73143235-73143518	7	-	73143235	73143235	16724991	1	283,	0,
#Partially deleted in new
chr15	73161778	73162928	chr15:73161778-73162928	7	-	73161778	73161778	16724991	2	554,232,	0,918,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	73221918	73244482	chr15:73221918-73244482	0	+	73221918	73221918	8553170	3	169,160,139,	0,14428,22425,
#Partially deleted in new
chr15	73254716	73259111	chr15:73254716-73259111	0	+	73254716	73254716	8553170	2	113,346,	0,4049,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	73255333	73256109	chr15:73255333-73256109	3	-	73255333	73255333	8553170	2	201,330,	0,446,
#Partially deleted in new
chr15	73289073	73302933	chr15:73289073-73302933	0	+	73289073	73289073	8553170	5	165,159,264,137,321,	0,4316,9274,12247,13539,
#Partially deleted in new
chr15	73298298	73301550	chr15:73298298-73301550	0	+	73298298	73298298	8553170	2	313,230,	0,3022,
#Partially deleted in new
chr15	73319858	73369264	chr15:73319858-73369264	3	-	73322480	73368270	0	8	4091,165,241,147,219,162,424,1779,	0,4230,5096,5439,9714,12272,23526,47627,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	73335259	73342357	chr15:73335259-73342357	3	+	73335259	73335259	8553170	4	73,170,53,45,	0,219,5753,7053,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	73335275	73342387	chr15:73335275-73342387	0	+	73335275	73335275	8553170	3	57,166,75,	0,203,7037,
#Partially deleted in new
chr15	73443157	73560014	chr15:73443157-73560014	3	+	73443185	73559916	789624	6	187,90,84,213,90,263,	0,30674,97327,107780,113144,116594,
#Partially deleted in new
chr15	73443163	73560010	chr15:73443163-73560010	1	+	73443185	73559916	789624	5	181,90,213,90,259,	0,30668,107774,113138,116588,
#Deleted in new
chr15	73483195	73483943	chr15:73483195-73483943	7	-	73483195	73483195	16724991	1	748,	0,
#Partially deleted in new
chr15	73560013	73633413	chr15:73560013-73633413	3	-	73561909	73633215	789624	9	1035,75,22,274,134,95,172,348,289,	0,1882,3222,10136,13648,27510,31952,37008,73111,
#Partially deleted in new
chr15	73560013	73634134	chr15:73560013-73634134	1	-	73561909	73633215	789624	8	1035,75,22,274,134,95,172,1010,	0,1882,3222,10136,13648,27510,31952,73111,
#Partially deleted in new
chr15	73560816	73633245	chr15:73560816-73633245	0	-	73561937	73633215	789624	6	232,75,22,274,134,121,	0,1079,2419,9333,12845,72308,
#Partially deleted in new
chr15	73560833	73633243	chr15:73560833-73633243	1	-	73561909	73633215	789624	8	215,75,10,274,134,95,172,119,	0,1062,2402,9316,12828,26690,31132,72291,
#Partially deleted in new
chr15	73560933	73563492	chr15:73560933-73563492	0	-	73560933	73560933	8553170	3	115,75,257,	0,962,2302,
#Partially deleted in new
chr15	73561909	73633244	chr15:73561909-73633244	1	-	73561909	73633215	789624	8	61,10,274,134,95,172,348,120,	0,1326,8240,11752,25614,30056,35112,71215,
#Deleted in new
chr15	73567011	73569294	chr15:73567011-73569294	3	-	73567011	73567011	789624	1	2283,	0,
#Partially deleted in new
chr15	73570273	73633227	chr15:73570273-73633227	0	-	73570273	73570273	8553170	5	150,134,95,104,103,	0,3388,17250,21692,62851,
#Partially deleted in new
chr15	73591635	73633221	chr15:73591635-73633221	0	-	73591635	73591635	8553170	2	502,97,	0,41489,
#Partially deleted in new
chr15	73592007	73632763	chr15:73592007-73632763	0	-	73592007	73597349	789624	3	130,348,93,	0,5014,40663,
#Partially deleted in new
chr15	73683965	73702573	chr15:73683965-73702573	0	+	73699639	73702573	789624	3	98,133,319,	0,15620,18289,
#Partially deleted in new
chr15	73684212	73714518	chr15:73684212-73714518	3	+	73699639	73712956	789624	10	248,133,339,315,339,297,135,42,36,1585,	0,15373,18042,18559,19446,19963,24126,25435,26922,28721,
#Partially deleted in new
chr15	73684268	73713677	chr15:73684268-73713677	1	+	73702791	73712956	789624	9	192,339,315,339,297,135,42,36,744,	0,17986,18503,19390,19907,24070,25379,26866,28665,
#Partially deleted in new
chr15	73684280	73714509	chr15:73684280-73714509	1	+	73699639	73712956	789624	8	180,133,339,297,135,42,36,1576,	0,15305,17974,19895,24058,25367,26854,28653,
#Partially deleted in new
chr15	73684382	73702821	chr15:73684382-73702821	0	+	73699639	73702821	789624	4	25,133,339,50,	0,15203,17872,18389,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	73684390	73712154	chr15:73684390-73712154	1	+	73699639	73711190	789624	9	70,133,339,315,339,297,135,42,1020,	0,15195,17864,18381,19268,19785,23948,25257,26744,
#Partially deleted in new
chr15	73684437	73713580	chr15:73684437-73713580	0	+	73699639	73702417	789624	10	23,133,214,315,339,297,135,42,36,647,	0,15148,17942,18334,19221,19738,23901,25210,26697,28496,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	73684437	73702497	chr15:73684437-73702497	0	+	73690713	73702497	789624	4	23,106,133,243,	0,6233,15148,17817,
#Partially deleted in new
chr15	73684501	73702330	chr15:73684501-73702330	0	+	73699639	73702330	789624	3	298,133,76,	0,15084,17753,
#Partially deleted in new
chr15	73684730	73702573	chr15:73684730-73702573	0	+	73699639	73702573	789624	3	169,133,319,	0,14855,17524,
#Partially deleted in new
chr15	73684771	73702952	chr15:73684771-73702952	0	+	73699639	73702417	789624	4	28,133,214,181,	0,14814,17608,18000,
#Partially deleted in new
chr15	73685005	73702849	chr15:73685005-73702849	0	+	73699639	73702849	789624	4	78,133,339,78,	0,14580,17249,17766,
#Partially deleted in new
chr15	73699639	73712956	chr15:73699639-73712956	1	+	73699639	73712956	789624	7	79,339,297,135,42,36,23,	0,2615,4536,8699,10008,11495,13294,
#Partially deleted in new
chr15	73703908	73712998	chr15:73703908-73712998	0	+	73703908	73712956	789624	6	89,297,111,42,36,65,	0,267,4454,5739,7226,9025,
#Partially deleted in new
chr15	73703950	73708689	chr15:73703950-73708689	0	+	73703950	73703950	8553170	3	47,297,351,	0,225,4388,
#Partially deleted in new
chr15	73704196	73714514	chr15:73704196-73714514	0	+	73704196	73712956	789624	6	276,135,42,36,130,1225,	0,4142,5451,6938,8737,9093,
#Partially deleted in new
chr15	73709564	73714053	chr15:73709564-73714053	0	+	73709564	73709564	8553170	4	125,36,130,212,	0,1570,3369,4277,
#Partially deleted in new
chr15	73711131	73714514	chr15:73711131-73714514	0	+	73711131	73711131	8553170	2	39,1581,	0,1802,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	73730047	73731711	chr15:73730047-73731711	3	-	73730047	73730047	8553170	1	1664,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	73735430	73752747	chr15:73735430-73752747	3	-	73739916	73751130	789624	3	5212,723,638,	0,15544,16679,
#Partially deleted in new
chr15	73739801	73751475	chr15:73739801-73751475	1	-	73739916	73751130	789624	2	841,501,	0,11173,
#Deleted in new
chr15	73739926	73740615	chr15:73739926-73740615	0	-	73739926	73739926	8553170	2	550,48,	0,641,
#Partially deleted in new
chr15	73740255	73752378	chr15:73740255-73752378	0	-	73740255	73751046	789624	3	387,123,269,	0,10719,11854,
#Partially deleted in new
chr15	73752316	73770613	chr15:73752316-73770613	3	+	73752316	73752316	8553170	2	80,1144,	0,17153,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	73768213	73769637	chr15:73768213-73769637	1	+	73768213	73768213	789624	3	243,108,168,	0,539,1256,
#Partially deleted in new
chr15	73873607	73889101	chr15:73873607-73889101	1	+	73873709	73889101	789624	10	162,104,95,111,101,97,101,117,84,33,	0,8036,10543,11173,11395,12470,12904,14012,14822,15461,
#Partially deleted in new
chr15	73873626	73889214	chr15:73873626-73889214	3	+	73873709	73889101	789624	11	143,108,104,95,111,101,97,101,117,84,146,	0,7772,8017,10524,11154,11376,12451,12885,13993,14803,15442,
#Partially deleted in new
chr15	73873645	73889102	chr15:73873645-73889102	1	+	73873709	73889101	789624	10	124,108,104,95,101,97,101,117,84,34,	0,7753,7998,10505,11357,12432,12866,13974,14784,15423,
#Partially deleted in new
chr15	73908070	73919870	chr15:73908070-73919870	3	-	73908070	73908070	8553170	4	478,119,105,33,	0,4114,8272,11767,
#Partially deleted in new
chr15	73908195	73926331	chr15:73908195-73926331	0	-	73908195	73908195	8553170	4	353,119,201,92,	0,3989,11642,18044,
#Partially deleted in new
chr15	73909771	73927942	chr15:73909771-73927942	0	-	73909771	73909771	8553170	4	79,119,201,166,	0,2413,10066,18005,
#Partially deleted in new
chr15	73916303	73926298	chr15:73916303-73926298	0	-	73916303	73916303	8553170	4	144,201,236,59,	0,3534,8966,9936,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	73917467	73928248	chr15:73917467-73928248	0	-	73917467	73917467	789624	3	1916,201,184,	0,2370,10597,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	73917595	73927786	chr15:73917595-73927786	1	-	73917595	73917595	789624	4	1788,201,236,133,	0,2242,7674,10058,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	73918760	73927959	chr15:73918760-73927959	1	-	73918760	73918760	789624	3	623,79,183,	0,1199,9016,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	73919027	73928203	chr15:73919027-73928203	0	-	73919027	73919027	8553170	3	356,79,139,	0,932,9037,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	73919039	73927960	chr15:73919039-73927960	0	-	73919039	73919039	8553170	2	999,184,	0,8737,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	73919058	73927695	chr15:73919058-73927695	0	-	73919058	73919058	8553170	3	325,201,42,	0,779,8595,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	73919154	73926342	chr15:73919154-73926342	0	-	73919154	73919154	8553170	3	229,201,103,	0,683,7085,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	73919160	73927940	chr15:73919160-73927940	0	-	73919160	73919160	8553170	3	223,201,164,	0,677,8616,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	73919202	73927695	chr15:73919202-73927695	0	-	73919202	73919202	8553170	4	181,79,236,42,	0,757,6067,8451,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	73925988	73951919	chr15:73925988-73951919	0	+	73926783	73942863	789624	8	1897,184,109,138,157,96,116,89,	0,15886,16865,20428,21078,21818,23470,25842,
#Partially deleted in new
chr15	73926457	73952137	chr15:73926457-73952137	3	+	73926783	73951837	789624	7	1428,109,138,157,96,116,307,	0,16396,19959,20609,21349,23001,25373,
#Deleted in new
chr15	73946367	73949575	chr15:73946367-73949575	0	+	73946367	73946367	8553170	4	187,157,96,117,	0,699,1439,3091,
#Deleted in new
chr15	73947215	73952137	chr15:73947215-73952137	0	+	73947215	73947215	8553170	3	687,116,307,	0,2243,4615,
#Deleted in new
chr15	73947827	73952136	chr15:73947827-73952136	0	+	73947827	73947827	8553170	3	75,79,306,	0,1631,4003,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	73978922	73992348	chr15:73978922-73992348	3	-	73983936	73992223	789624	7	5208,213,196,204,150,107,258,	0,5736,6395,9676,10185,11428,13168,
#Partially deleted in new
chr15	73983205	73992297	chr15:73983205-73992297	1	-	73983936	73992223	789624	6	925,210,196,204,107,207,	0,1453,2112,5393,7145,8885,
#Partially deleted in new
chr15	73983217	73992348	chr15:73983217-73992348	1	-	73983936	73990821	789624	8	913,210,196,204,150,107,131,258,	0,1441,2100,5381,5890,7133,7597,8873,
#Partially deleted in new
chr15	73983217	73992348	chr15:73983217-73992348	1	-	73983936	73992223	789624	6	913,213,196,204,107,258,	0,1441,2100,5381,7133,8873,
#Deleted in new
chr15	73983219	73986500	chr15:73983219-73986500	0	-	73983219	73983219	8553170	3	911,210,1183,	0,1439,2098,
#Partially deleted in new
chr15	73983236	73994622	chr15:73983236-73994622	1	-	73983936	73989236	789624	7	894,210,196,204,150,107,72,	0,1422,2081,5362,5871,7114,11314,
#Partially deleted in new
chr15	73983936	73992223	chr15:73983936-73992223	1	-	73983936	73992223	789624	6	194,196,204,150,107,133,	0,1381,4662,5171,6414,8154,
#Partially deleted in new
chr15	73986362	73994608	chr15:73986362-73994608	0	-	73986362	73986362	8553170	3	2895,107,58,	0,3988,8188,
#Partially deleted in new
chr15	73988653	73991834	chr15:73988653-73991834	0	-	73988653	73991633	789624	4	149,150,107,208,	0,454,1697,2973,
#Partially deleted in new
chr15	73988653	73992318	chr15:73988653-73992318	0	-	73988653	73989236	789624	4	149,150,107,106,	0,454,1697,3559,
#Partially deleted in new
chr15	73988665	73992251	chr15:73988665-73992251	0	-	73988665	73988665	8553170	4	137,228,107,161,	0,364,1685,3425,
#Partially deleted in new
chr15	73988791	73992230	chr15:73988791-73992230	0	-	73988791	73990821	789624	5	11,150,107,131,140,	0,316,1559,2023,3299,
#Partially deleted in new
chr15	73990026	73992256	chr15:73990026-73992256	0	-	73990026	73990026	8553170	2	431,166,	0,2064,
#Partially deleted in new
chr15	73994672	74043337	chr15:73994672-74043337	1	+	73994812	74043180	0	8	269,473,581,71,144,259,53,349,	0,3331,28155,30184,37899,38483,39805,48316,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	73994716	74046771	chr15:73994716-74046771	3	+	73994812	74045008	0	9	225,473,581,71,144,259,53,151,2551,	0,3287,28111,30140,37855,38439,39761,48272,49504,
#Partially deleted in new
chr15	73994716	74036394	chr15:73994716-74036394	1	+	73994812	74035951	0	8	225,473,581,71,144,259,53,1223,	0,3287,28111,30140,37855,38439,39761,40455,
#Partially deleted in new
chr15	73994716	74036394	chr15:73994716-74036394	1	+	73994812	74035951	0	7	225,473,581,71,259,53,1223,	0,3287,28111,30140,38439,39761,40455,
#Partially deleted in new
chr15	73994716	74036394	chr15:73994716-74036394	1	+	73994812	74036060	0	5	225,473,581,71,388,	0,3287,28111,30140,41290,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	73994728	74047812	chr15:73994728-74047812	1	+	73994812	74045008	0	8	213,473,581,71,259,53,151,3592,	0,3275,28099,30128,38427,39749,48260,49492,
#Partially deleted in new
chr15	73994730	74035590	chr15:73994730-74035590	1	+	73994812	74035347	0	8	211,473,581,71,144,259,53,459,	0,3273,28097,30126,37841,38425,39747,40401,
#Partially deleted in new
chr15	73994732	74043338	chr15:73994732-74043338	1	+	73994812	74034495	0	8	209,473,581,71,144,267,53,350,	0,3271,28095,30124,37839,38423,39745,48256,
#Partially deleted in new
chr15	73994743	74043338	chr15:73994743-74043338	1	+	73994812	74034495	0	6	198,473,581,71,53,350,	0,3260,28084,30113,39734,48245,
#Partially deleted in new
chr15	73994743	74036394	chr15:73994743-74036394	1	+	73994812	74034656	0	7	198,473,581,71,144,259,1917,	0,3260,28084,30113,37828,38412,39734,
#Partially deleted in new
chr15	73994743	74036394	chr15:73994743-74036394	1	+	73994812	74034495	0	8	198,473,581,71,144,267,53,1223,	0,3260,28084,30113,37828,38412,39734,40428,
#Partially deleted in new
chr15	73994743	74043338	chr15:73994743-74043338	1	+	73994812	74043180	0	7	198,473,581,71,259,53,350,	0,3260,28084,30113,38412,39734,48245,
#Partially deleted in new
chr15	73994743	74034558	chr15:73994743-74034558	1	+	73994812	74034495	0	5	198,473,581,71,81,	0,3260,28084,30113,39734,
#Partially deleted in new
chr15	73994802	74036393	chr15:73994802-74036393	1	+	73994812	74033608	789624	5	139,473,581,71,3238,	0,3201,28025,30054,38353,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	73998023	74028442	chr15:73998023-74028442	0	+	73998023	73998023	8553170	3	453,581,3586,	0,24804,26833,
#Partially deleted in new
chr15	74022904	74032714	chr15:74022904-74032714	0	+	74022904	74022904	8553170	3	461,71,143,	0,1952,9667,
#Partially deleted in new
chr15	74022911	74036122	chr15:74022911-74036122	0	+	74022911	74036060	789624	4	497,71,127,88,	0,1945,9660,13123,
#Partially deleted in new
chr15	74022980	74036394	chr15:74022980-74036394	0	+	74022980	74034495	789624	5	428,71,267,53,1223,	0,1876,10175,11497,12191,
#Partially deleted in new
chr15	74023294	74035335	chr15:74023294-74035335	0	+	74023294	74035154	789624	6	114,71,144,259,53,193,	0,1562,9277,9861,11183,11848,
#Partially deleted in new
chr15	74024879	74036394	chr15:74024879-74036394	0	+	74024879	74034495	789624	3	48,267,1917,	0,8276,9598,
#Deleted in new
chr15	74032394	74033205	chr15:74032394-74033205	0	+	74032394	74032394	8553170	2	321,50,	0,761,
#Deleted in new
chr15	74041328	74043342	chr15:74041328-74043342	0	+	74041328	74041328	8553170	2	242,354,	0,1660,
#Partially deleted in new
chr15	74062779	74063785	chr15:74062779-74063785	7	+	74062779	74062779	16724991	2	173,97,	0,909,
#Partially deleted in new
chr15	74069856	74082550	chr15:74069856-74082550	3	-	74070909	74082509	789624	18	1181,154,104,103,92,76,69,509,88,108,87,107,82,51,39,81,120,125,	0,1267,1510,1697,2361,2885,4291,4636,5546,5826,6042,7161,7364,7546,7858,8752,10759,12569,
#Deleted in new
chr15	74070645	74071310	chr15:74070645-74071310	0	-	74070645	74070645	8553170	2	392,187,	0,478,
#Partially deleted in new
chr15	74072250	74073013	chr15:74072250-74073013	0	-	74072250	74072250	8553170	2	59,272,	0,491,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	74072453	74072676	chr15:74072453-74072676	3	-	74072453	74072453	8553170	1	223,	0,
#Partially deleted in new
chr15	74077075	74082550	chr15:74077075-74082550	0	-	74077075	74077075	8553170	5	49,233,39,81,125,	0,145,639,1533,5350,
#Deleted in new
chr15	74097105	74098414	chr15:74097105-74098414	7	-	74097105	74097105	16724991	5	88,120,40,66,72,	0,248,686,951,1237,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	74100310	74138540	chr15:74100310-74138540	0	+	74100310	74100310	8553170	4	159,69,110,225,	0,3535,30896,38005,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	74125914	74128838	chr15:74125914-74128838	0	-	74125914	74125914	8553170	1	2924,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	74126372	74129278	chr15:74126372-74129278	3	-	74126372	74126372	789624	2	2252,314,	0,2592,
#Deleted in new
chr15	74128125	74133022	chr15:74128125-74133022	0	+	74132754	74133022	789624	4	182,68,110,276,	0,2428,3081,4621,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	74129373	74136802	chr15:74129373-74136802	3	+	74132754	74134992	789624	4	583,68,110,4056,	0,1180,1833,3373,
#Deleted in new
chr15	74129645	74130028	chr15:74129645-74130028	0	+	74129645	74129645	8553170	2	82,99,	0,284,
#Deleted in new
chr15	74129658	74135077	chr15:74129658-74135077	1	+	74132754	74134992	789624	4	315,68,110,2331,	0,895,1548,3088,
#Deleted in new
chr15	74129665	74132769	chr15:74129665-74132769	0	+	74132754	74132769	8553170	4	422,68,110,23,	0,888,1541,3081,
#Deleted in new
chr15	74130245	74133168	chr15:74130245-74133168	0	+	74132754	74133168	789624	4	30,68,110,422,	0,308,961,2501,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	74130248	74136800	chr15:74130248-74136800	1	+	74132754	74134992	789624	4	27,68,110,4054,	0,305,958,2498,
#Deleted in new
chr15	74130299	74135126	chr15:74130299-74135126	1	+	74132754	74134992	789624	3	322,110,2380,	0,907,2447,
#Deleted in new
chr15	74131080	74133096	chr15:74131080-74133096	0	+	74132754	74133096	789624	2	236,350,	0,1666,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	74131239	74136208	chr15:74131239-74136208	1	+	74132754	74134992	789624	3	77,482,1747,	0,1507,3222,
#Deleted in new
chr15	74131901	74135418	chr15:74131901-74135418	1	+	74132754	74134992	789624	2	108,2672,	0,845,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	74152799	74179226	chr15:74152799-74179226	3	-	74152799	74152799	8553170	3	406,77,71,	0,3327,26356,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	74162339	74162620	chr15:74162339-74162620	3	-	74162339	74162339	8553170	1	281,	0,
#Deleted in new
chr15	74173670	74176872	chr15:74173670-74176872	3	+	74174858	74176145	789624	2	349,2022,	0,1180,
#Deleted in new
chr15	74174129	74175299	chr15:74174129-74175299	0	+	74174858	74175299	789624	2	121,449,	0,721,
#Deleted in new
chr15	74174402	74175409	chr15:74174402-74175409	0	+	74174858	74175409	789624	2	26,559,	0,448,
#Deleted in new
chr15	74174500	74176872	chr15:74174500-74176872	1	+	74174858	74176145	789624	2	153,2022,	0,350,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr15	74179465	74209030	chr15:74179465-74209030	1	-	74180079	74202267	789624	19	778,156,164,102,118,134,76,163,62,77,68,123,167,24,140,86,67,128,231,	0,1316,1829,2695,2877,4390,5514,9649,11374,11701,11958,14334,15836,16186,16542,17872,18286,22689,29334,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr15	74179465	74202879	chr15:74179465-74202879	1	-	74180079	74202267	789624	19	778,156,164,102,118,134,76,163,62,77,68,123,167,24,140,86,67,128,167,	0,1316,1829,2695,2877,4390,5514,9649,11374,11701,11958,14334,15836,16186,16542,17872,18286,22689,23247,
#Partially deleted in new
chr15	74179465	74212267	chr15:74179465-74212267	1	-	74180079	74202267	789624	18	778,156,164,102,118,134,76,163,62,77,68,123,167,140,86,67,128,141,	0,1316,1829,2695,2877,4390,5514,9649,11374,11701,11958,14334,15836,16542,17872,18286,22689,32661,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr15	74179465	74208969	chr15:74179465-74208969	1	-	74180079	74202267	789624	19	778,156,164,102,118,134,76,163,62,77,68,123,167,24,113,86,67,128,170,	0,1316,1829,2695,2877,4390,5514,9649,11374,11701,11958,14334,15836,16186,16542,17872,18286,22689,29334,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr15	74179465	74212225	chr15:74179465-74212225	3	-	74180079	74202267	789624	19	778,156,164,102,118,134,76,163,62,77,68,123,167,24,140,86,67,128,99,	0,1316,1829,2695,2877,4390,5514,9649,11374,11701,11958,14334,15836,16186,16542,17872,18286,22689,32661,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr15	74179468	74196289	chr15:74179468-74196289	0	-	74179468	74179468	8553170	14	775,156,164,102,118,134,76,163,62,77,68,123,24,282,	0,1313,1826,2692,2874,4387,5511,9646,11371,11698,11955,14331,16183,16539,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr15	74179468	74203215	chr15:74179468-74203215	0	-	74179468	74179468	8553170	19	775,156,164,102,118,134,76,163,62,77,68,123,167,24,140,86,111,128,213,	0,1313,1826,2692,2874,4387,5511,9646,11371,11698,11955,14331,15833,16183,16539,17869,18283,22686,23534,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr15	74179468	74203215	chr15:74179468-74203215	1	-	74180079	74202267	789624	19	775,156,164,102,118,134,76,163,62,77,68,123,167,24,140,86,67,128,213,	0,1313,1826,2692,2874,4387,5511,9646,11371,11698,11955,14331,15833,16183,16539,17869,18283,22686,23534,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr15	74179814	74209705	chr15:74179814-74209705	1	-	74180079	74209454	789624	19	429,156,164,102,118,134,76,163,62,77,68,123,167,24,140,86,67,128,347,	0,967,1480,2346,2528,4041,5165,9300,11025,11352,11609,13985,15487,15837,16193,17523,17937,22340,29544,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr15	74179974	74202858	chr15:74179974-74202858	1	-	74180079	74202519	789624	19	269,156,164,102,118,134,76,163,62,77,68,123,167,24,140,86,67,128,441,	0,807,1320,2186,2368,3881,5005,9140,10865,11192,11449,13825,15327,15677,16033,17363,17777,22180,22443,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr15	74180001	74208054	chr15:74180001-74208054	1	-	74180079	74207726	789624	19	242,156,164,102,118,134,76,163,62,77,68,123,167,24,140,86,67,128,358,	0,780,1293,2159,2341,3854,4978,9113,10838,11165,11422,13798,15300,15650,16006,17336,17750,22153,27695,
#Partially deleted in new
chr15	74180141	74189233	chr15:74180141-74189233	0	-	74180141	74189233	789624	7	102,156,164,62,118,76,119,	0,640,1153,2019,2201,4838,8973,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	74182226	74182878	chr15:74182226-74182878	0	-	74182226	74182226	8553170	2	36,536,	0,116,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr15	74182447	74203092	chr15:74182447-74203092	0	-	74183851	74202267	789624	14	13,737,76,163,269,68,123,167,24,140,86,67,128,90,	0,805,2532,6667,8392,8976,11352,12854,13204,13560,14890,15304,19707,20555,
#Deleted in new
chr15	74190884	74192008	chr15:74190884-74192008	0	-	74190884	74190884	8553170	3	359,68,368,	0,539,756,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	74194386	74208978	chr15:74194386-74208978	1	-	74195601	74202267	789624	6	1289,140,86,67,128,179,	0,1621,2951,3365,7768,14413,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	74195330	74202405	chr15:74195330-74202405	0	-	74195330	74195330	8553170	2	345,251,	0,6824,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	74195422	74202503	chr15:74195422-74202503	0	-	74195422	74195422	8553170	7	46,24,247,86,111,160,86,	0,229,585,1915,2329,6732,6995,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	74195584	74202450	chr15:74195584-74202450	0	-	74195584	74195584	8553170	6	91,140,86,67,160,33,	0,423,1753,2167,6570,6833,
#Partially deleted in new
chr15	74196103	74202849	chr15:74196103-74202849	0	-	74196103	74196103	8553170	5	151,86,67,128,137,	0,1234,1648,6051,6609,
#Partially deleted in new
chr15	74197337	74202450	chr15:74197337-74202450	0	-	74197337	74202267	789624	3	86,67,296,	0,414,4817,
#Partially deleted in new
chr15	74197338	74203056	chr15:74197338-74203056	0	-	74197667	74202267	789624	4	85,299,128,54,	0,181,4816,5664,
#Partially deleted in new
chr15	74202704	74221557	chr15:74202704-74221557	0	+	74202704	74202704	8553170	5	394,147,132,365,308,	0,6683,9441,15792,18545,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	74203049	74212973	chr15:74203049-74212973	0	+	74203049	74203049	8553170	4	49,147,132,492,	0,6338,9096,9432,
#Partially deleted in new
chr15	74217200	74218789	chr15:74217200-74218789	0	+	74217200	74217200	8553170	2	233,293,	0,1296,
#Partially deleted in new
chr15	74217200	74244148	chr15:74217200-74244148	0	+	74217271	74244148	789624	3	381,365,164,	0,1296,26784,
#Partially deleted in new
chr15	74236288	74336141	chr15:74236288-74336141	3	+	74236719	74336053	789624	19	452,164,134,110,117,92,121,130,134,72,195,166,89,132,94,167,87,114,217,	0,7696,26151,30389,32053,35414,36482,43674,44379,45489,59465,93900,94374,94692,94914,96390,97592,98686,99636,
#Partially deleted in new
chr15	74266717	74336472	chr15:74266717-74336472	0	+	74266717	74336457	789624	17	70,117,92,121,130,134,72,195,166,89,132,94,167,102,87,114,237,	0,1624,4985,6053,13245,13950,15060,29036,63471,63945,64263,64485,65961,66503,67163,68257,69518,
#Partially deleted in new
chr15	74295812	74300829	chr15:74295812-74300829	0	+	74295812	74295812	8553170	2	136,172,	0,4845,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	74299502	74304527	chr15:74299502-74304527	3	+	74299502	74299502	8553170	1	5025,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	74303004	74304343	chr15:74303004-74304343	3	+	74303004	74303004	8553170	2	90,292,	0,1047,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	74311515	74319688	chr15:74311515-74319688	3	-	74311515	74311515	8553170	2	443,169,	0,8004,
#Partially deleted in new
chr15	74318540	74335672	chr15:74318540-74335672	0	+	74318589	74335172	789624	9	118,166,89,132,94,167,87,436,161,	0,11648,12122,12440,12662,14138,15340,16434,16971,
#Partially deleted in new
chr15	74318540	74335013	chr15:74318540-74335013	0	+	74318540	74318540	8553170	7	118,166,89,132,644,87,39,	0,11648,12122,12440,14138,15340,16434,
#Partially deleted in new
chr15	74318558	74336132	chr15:74318558-74336132	1	+	74318589	74335172	789624	8	100,166,89,132,94,167,87,1158,	0,11630,12104,12422,12644,14120,15322,16416,
#Partially deleted in new
chr15	74318569	74336141	chr15:74318569-74336141	1	+	74318589	74335172	789624	9	89,166,89,132,94,167,102,87,1167,	0,11619,12093,12411,12633,14109,14651,15311,16405,
#Partially deleted in new
chr15	74337758	74367740	chr15:74337758-74367740	3	-	74337971	74367585	0	9	345,198,79,167,161,204,200,156,424,	0,812,1478,1828,5218,6030,7285,10141,29558,
#Partially deleted in new
chr15	74337758	74366206	chr15:74337758-74366206	1	-	74337971	74345194	0	9	345,198,79,167,161,204,200,156,491,	0,812,1478,1828,5218,6030,7285,10141,27957,
#Deleted in new
chr15	74337779	74339315	chr15:74337779-74339315	0	-	74337779	74337779	8553170	3	324,449,79,	0,540,1457,
#Partially deleted in new
chr15	74337871	74367627	chr15:74337871-74367627	0	-	74338680	74367585	789624	8	232,198,167,161,204,200,156,311,	0,699,1715,5105,5917,7172,10028,29445,
#Duplicated in new
chr15	74339586	74359603	chr15:74339586-74359603	0	-	74339586	74345194	789624	6	167,161,204,200,156,81,	0,3390,4202,5457,8313,19936,
#Partially deleted in new
chr15	74343855	74366178	chr15:74343855-74366178	0	-	74343855	74345194	789624	5	137,200,156,89,463,	0,1188,4044,6310,21860,
#Partially deleted in new
chr15	74345114	74366158	chr15:74345114-74366158	0	-	74345114	74345194	789624	2	129,443,	0,20601,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	74345201	74366189	chr15:74345201-74366189	0	-	74345201	74345201	8553170	3	42,345,474,	0,2698,20514,
#Partially deleted in new
chr15	74345210	74367646	chr15:74345210-74367646	0	-	74345210	74367585	789624	3	80,156,330,	0,2689,22106,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	74354455	74364620	chr15:74354455-74364620	5	+	74354455	74354455	16724991	2	230,3107,	0,7058,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	74361374	74367646	chr15:74361374-74367646	0	-	74361374	74361374	8553170	2	409,330,	0,5942,
#Partially deleted in new
chr15	74361551	74362041	chr15:74361551-74362041	5	+	74361551	74361551	16724991	1	490,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	74365434	74371211	chr15:74365434-74371211	3	+	74365434	74365434	8553170	3	71,371,4504,	0,227,1273,
#Deleted in new
chr15	74374677	74375511	chr15:74374677-74375511	3	+	74374677	74374677	8553170	1	834,	0,
#Partially deleted in new
chr15	74379082	74390535	chr15:74379082-74390535	3	+	74379082	74379082	8553170	3	99,83,17,	0,2486,11436,
#Partially deleted in new
chr15	74409288	74433958	chr15:74409288-74433958	3	-	74410623	74433918	0	14	1697,62,155,128,199,109,185,140,111,85,93,42,152,218,	0,2006,2267,2596,5258,5549,6512,7286,8046,8302,8588,8979,9512,24452,
#Partially deleted in new
chr15	74410025	74433704	chr15:74410025-74433704	1	-	74410623	74417645	789624	14	960,62,155,128,199,109,185,140,111,85,93,42,152,115,	0,1269,1530,1859,4521,4812,5775,6549,7309,7565,7851,8242,8775,23564,
#Partially deleted in new
chr15	74410315	74433955	chr15:74410315-74433955	1	-	74410623	74433918	0	13	670,62,155,128,199,109,185,140,111,85,93,152,215,	0,979,1240,1569,4231,4522,5485,6259,7019,7275,7561,8485,23425,
#Deleted in new
chr15	74410967	74411639	chr15:74410967-74411639	0	-	74410967	74410967	8553170	2	389,84,	0,588,
#Deleted in new
chr15	74411356	74411432	chr15:74411356-74411432	3	-	74411356	74411356	5263520	1	76,	0,
#Partially deleted in new
chr15	74445976	74461182	chr15:74445976-74461182	3	-	74446089	74458867	0	11	251,123,168,50,134,58,85,83,120,213,75,	0,2501,3209,3649,3959,4825,5459,6319,10575,12707,15131,
#Partially deleted in new
chr15	74445976	74461178	chr15:74445976-74461178	1	-	74446089	74458867	0	11	251,123,168,50,134,58,85,83,120,213,142,	0,2501,3209,3649,3959,4825,5459,6319,10575,12707,15060,
#Partially deleted in new
chr15	74445976	74461151	chr15:74445976-74461151	1	-	74446089	74458867	0	12	251,123,168,50,134,58,85,83,120,213,85,44,	0,2501,3209,3649,3959,4825,5459,6319,10575,12707,13042,15131,
#Partially deleted in new
chr15	74445976	74449311	chr15:74445976-74449311	0	-	74446089	74449311	789624	3	251,81,126,	0,2501,3209,
#Partially deleted in new
chr15	74445976	74452378	chr15:74445976-74452378	0	-	74446089	74452378	789624	6	251,50,134,58,85,83,	0,3649,3959,4825,5459,6319,
#Partially deleted in new
chr15	74445976	74461102	chr15:74445976-74461102	1	-	74446089	74458867	0	11	251,123,168,50,134,58,85,83,120,213,435,	0,2501,3209,3649,3959,4825,5459,6319,10575,12707,14691,
#Partially deleted in new
chr15	74445977	74461118	chr15:74445977-74461118	1	-	74446089	74458867	0	12	250,123,168,50,134,58,85,83,120,213,111,82,	0,2500,3208,3648,3958,4824,5458,6318,10574,12706,14690,15059,
#Partially deleted in new
chr15	74449225	74461125	chr15:74449225-74461125	0	-	74449225	74458867	789624	7	128,50,134,58,120,213,89,	0,400,710,1576,7326,9458,11811,
#Partially deleted in new
chr15	74450027	74461141	chr15:74450027-74461141	0	-	74450027	74458867	789624	6	42,58,83,120,213,105,	0,774,2268,6524,8656,11009,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	74461264	74481302	chr15:74461264-74481302	0	+	74461264	74461264	789624	4	767,95,219,252,	0,4771,17795,19786,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	74461264	74479222	chr15:74461264-74479222	0	+	74461264	74461264	8553170	4	154,149,95,163,	0,618,4771,17795,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	74461306	74479265	chr15:74461306-74479265	0	+	74461306	74461306	8553170	4	112,145,95,222,	0,576,4729,17737,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	74461335	74481291	chr15:74461335-74481291	3	+	74461335	74461335	789624	5	763,95,219,294,241,	0,4700,17724,19285,19715,
#Partially deleted in new
chr15	74461343	74481288	chr15:74461343-74481288	0	+	74461343	74461343	8553170	2	292,84,	0,19861,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	74478069	74490286	chr15:74478069-74490286	7	-	74478069	74478069	16724991	2	3334,51,	0,12166,
#Deleted in new
chr15	74481024	74481398	chr15:74481024-74481398	5	-	74481024	74481024	16724991	2	106,134,	0,240,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	74489601	74516959	chr15:74489601-74516959	3	+	74489601	74489601	8553170	4	102,75,119,65,	0,1359,1862,27293,
#Deleted in new
chr15	74490958	74491028	chr15:74490958-74491028	3	-	74490958	74490958	8553170	1	70,	0,
#Partially deleted in new
chr15	74541176	74598131	chr15:74541176-74598131	3	+	74543936	74595774	789624	9	154,629,72,73,184,284,255,99,2521,	0,2683,31685,31955,48643,49974,50383,51961,54434,
#Partially deleted in new
chr15	74541205	74598129	chr15:74541205-74598129	1	+	74543936	74595774	789624	9	125,629,72,73,184,284,255,102,2519,	0,2654,31656,31926,48614,49945,50354,51929,54405,
#Duplicated in new
chr15	74541263	74575017	chr15:74541263-74575017	0	+	74541263	74541263	8553170	4	67,629,72,1886,	0,2596,31598,31868,
#Partially deleted in new
chr15	74544349	74591408	chr15:74544349-74591408	0	+	74589845	74591408	789624	3	139,184,258,	0,45470,46801,
#Deleted in new
chr15	74591186	74593201	chr15:74591186-74593201	0	+	74591186	74591186	8553170	2	628,64,	0,1951,
#Deleted in new
chr15	74596595	74597977	chr15:74596595-74597977	0	+	74596595	74596595	8553170	2	323,197,	0,1185,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	74598499	74608727	chr15:74598499-74608727	0	+	74598499	74598499	8553170	6	1038,304,80,801,173,451,	0,3092,4667,6433,7743,9777,
#Deleted in new
chr15	74598918	74599397	chr15:74598918-74599397	3	-	74598918	74598918	8553170	1	479,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	74605581	74608727	chr15:74605581-74608727	0	+	74605581	74605581	8553170	2	152,451,	0,2695,
#Partially deleted in new
chr15	74608371	74630201	chr15:74608371-74630201	3	+	74619196	74629883	0	13	55,152,217,97,67,117,167,95,130,83,80,91,495,	0,10825,11637,13748,14122,16530,17430,18980,19167,19598,20232,20570,21335,
#Partially deleted in new
chr15	74608371	74630201	chr15:74608371-74630201	0	+	74619196	74624924	0	12	55,152,217,67,117,167,95,130,83,80,91,495,	0,10825,11637,14122,16530,17430,18980,19167,19598,20232,20570,21335,
#Partially deleted in new
chr15	74613193	74615596	chr15:74613193-74615596	3	-	74613193	74613193	8553170	2	318,180,	0,2223,
#Deleted in new
chr15	74614828	74620207	chr15:74614828-74620207	0	+	74619196	74620207	789624	3	221,152,199,	0,4368,5180,
#Partially deleted in new
chr15	74614993	74630126	chr15:74614993-74630126	1	+	74615454	74629883	0	13	905,152,217,97,67,117,167,95,130,83,80,91,420,	0,4203,5015,7126,7500,9908,10808,12358,12545,12976,13610,13948,14713,
#Partially deleted in new
chr15	74615795	74630200	chr15:74615795-74630200	0	+	74615795	74615795	8553170	12	103,152,2208,67,117,167,95,130,83,80,91,494,	0,3401,4213,6698,9106,10006,11556,11743,12174,12808,13146,13911,
#Partially deleted in new
chr15	74615835	74627401	chr15:74615835-74627401	0	+	74615835	74624924	789624	7	63,152,217,67,117,167,50,	0,3361,4173,6658,9066,9966,11516,
#Deleted in new
chr15	74615838	74625967	chr15:74615838-74625967	0	+	74615838	74625967	789624	7	60,152,259,97,67,117,166,	0,3358,4128,6281,6655,9063,9963,
#Deleted in new
chr15	74615843	74625871	chr15:74615843-74625871	0	+	74625814	74625871	789624	5	55,217,67,117,70,	0,4165,6650,9058,9958,
#Deleted in new
chr15	74615854	74624969	chr15:74615854-74624969	0	+	74615854	74624969	789624	4	44,152,217,68,	0,3342,4154,9047,
#Deleted in new
chr15	74615871	74625894	chr15:74615871-74625894	0	+	74615871	74615871	8553170	6	27,152,217,441,117,93,	0,3325,4137,6248,9030,9930,
#Deleted in new
chr15	74615891	74625825	chr15:74615891-74625825	0	+	74619196	74625825	789624	7	58,152,217,97,67,117,24,	0,3305,4117,6228,6602,9010,9910,
#Deleted in new
chr15	74615914	74620737	chr15:74615914-74620737	0	+	74615914	74615914	8553170	3	35,152,729,	0,3282,4094,
#Deleted in new
chr15	74619088	74622560	chr15:74619088-74622560	0	+	74619196	74622560	789624	3	260,217,67,	0,920,3405,
#Deleted in new
chr15	74619108	74625868	chr15:74619108-74625868	0	+	74619196	74625868	789624	6	240,217,97,67,117,67,	0,900,3011,3385,5793,6693,
#Partially deleted in new
chr15	74620221	74630195	chr15:74620221-74630195	0	+	74620221	74620221	8553170	9	2339,117,167,95,130,83,80,91,489,	0,4680,5580,7130,7317,7748,8382,8720,9485,
#Deleted in new
chr15	74621567	74622509	chr15:74621567-74622509	0	+	74621567	74621567	8553170	2	649,16,	0,926,
#Partially deleted in new
chr15	74623619	74630116	chr15:74623619-74630116	0	+	74623619	74623619	8553170	8	1399,167,95,130,83,80,91,410,	0,2182,3732,3919,4350,4984,5322,6087,
#Partially deleted in new
chr15	74624118	74628969	chr15:74624118-74628969	0	+	74625814	74628969	789624	8	228,49,167,95,130,83,80,28,	0,851,1683,3233,3420,3851,4485,4823,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	74625852	74629962	chr15:74625852-74629962	0	+	74625852	74627050	789624	8	116,78,95,130,83,80,91,256,	0,1136,1499,1686,2117,2751,3089,3854,
#Deleted in new
chr15	74627437	74629285	chr15:74627437-74629285	0	+	74627437	74629221	789624	5	9,130,83,80,344,	0,101,532,1166,1504,
#Deleted in new
chr15	74627616	74629136	chr15:74627616-74629136	0	+	74627616	74627616	8553170	3	52,80,195,	0,987,1325,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	74627983	74639716	chr15:74627983-74639716	0	+	74627983	74627983	8553170	5	69,80,91,119,280,	0,620,958,7114,11453,
#Deleted in new
chr15	74628591	74629661	chr15:74628591-74629661	0	+	74628591	74628591	8553170	2	92,720,	0,350,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	74628593	74645414	chr15:74628593-74645414	0	+	74628593	74635127	789624	3	90,91,10317,	0,348,6504,
#Deleted in new
chr15	74629160	74630118	chr15:74629160-74630118	0	+	74629160	74629160	8553170	1	958,	0,
#Partially deleted in new
chr15	74630557	74696043	chr15:74630557-74696043	3	-	74632611	74675124	0	7	2389,218,154,336,320,182,164,	0,4851,9908,25175,40897,44403,65322,
#Partially deleted in new
chr15	74632124	74696029	chr15:74632124-74696029	0	-	74656058	74675124	789624	6	822,218,154,336,182,150,	0,3284,8341,23608,42836,63755,
#Partially deleted in new
chr15	74632541	74696000	chr15:74632541-74696000	1	-	74632611	74675124	0	8	405,218,154,336,320,182,89,121,	0,2867,7924,23191,38913,42419,54549,63338,
#Partially deleted in new
chr15	74632732	74635727	chr15:74632732-74635727	0	-	74632732	74632732	8553170	2	214,319,	0,2676,
#Partially deleted in new
chr15	74635180	74655893	chr15:74635180-74655893	0	-	74635301	74655893	789624	3	446,154,161,	0,5285,20552,
#Partially deleted in new
chr15	74635561	74696012	chr15:74635561-74696012	0	-	74635561	74656003	789624	4	65,154,336,133,	0,4904,20171,60318,
#Partially deleted in new
chr15	74640560	74671599	chr15:74640560-74671599	0	-	74640560	74671599	789624	2	59,145,	0,30894,
#Partially deleted in new
chr15	74656019	74696292	chr15:74656019-74696292	0	-	74656019	74675124	789624	4	49,320,182,107,	0,15435,18941,40166,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	74671567	74695940	chr15:74671567-74695940	0	-	74671567	74675124	789624	4	207,182,124,61,	0,3393,8234,24312,
#Partially deleted in new
chr15	74671634	74695673	chr15:74671634-74695673	0	-	74671634	74675124	789624	3	140,182,251,	0,3326,23788,
#Partially deleted in new
chr15	74671661	74695662	chr15:74671661-74695662	0	-	74671661	74675124	789624	3	113,182,293,	0,3299,23708,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	74674860	74695976	chr15:74674860-74695976	0	-	74674860	74674860	8553170	2	282,97,	0,21019,
#Partially deleted in new
chr15	74674960	74695614	chr15:74674960-74695614	0	-	74674960	74675124	789624	2	182,289,	0,20365,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	74675030	74696024	chr15:74675030-74696024	0	-	74675030	74675124	789624	4	112,89,133,145,	0,12060,17855,20849,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	74687129	74695701	chr15:74687129-74695701	0	-	74687129	74687129	8553170	3	50,133,376,	0,5756,8196,
#Partially deleted in new
chr15	74719541	74725610	chr15:74719541-74725610	3	-	74720488	74723097	0	7	1233,87,124,90,127,854,170,	0,1425,1657,1872,2049,2731,5899,
#Partially deleted in new
chr15	74719541	74725536	chr15:74719541-74725536	1	-	74720488	74723097	0	7	1233,87,124,90,127,851,96,	0,1425,1657,1872,2049,2731,5899,
#Deleted in new
chr15	74719541	74723097	chr15:74719541-74723097	1	-	74720488	74723097	789624	7	1233,87,124,90,127,84,657,	0,1425,1657,1872,2049,2731,2899,
#Partially deleted in new
chr15	74719541	74725536	chr15:74719541-74725536	1	-	74720488	74723097	789624	6	1233,124,90,127,851,96,	0,1657,1872,2049,2731,5899,
#Partially deleted in new
chr15	74720155	74725370	chr15:74720155-74725370	1	-	74720488	74723097	0	7	619,87,124,90,127,854,206,	0,811,1043,1258,1435,2117,5009,
#Partially deleted in new
chr15	74720429	74725494	chr15:74720429-74725494	1	-	74720488	74723097	789624	6	345,124,90,127,854,54,	0,769,984,1161,1843,5011,
#Partially deleted in new
chr15	74720719	74725491	chr15:74720719-74725491	0	-	74722334	74723097	0	8	55,87,124,90,127,69,589,51,	0,247,479,694,871,1553,1815,4721,
#Partially deleted in new
chr15	74720719	74725491	chr15:74720719-74725491	1	-	74720962	74722314	0	6	334,124,90,127,262,51,	0,479,694,871,1553,4721,
#Partially deleted in new
chr15	74720719	74725491	chr15:74720719-74725491	0	-	74720719	74722314	789624	7	55,87,124,90,127,262,51,	0,247,479,694,871,1553,4721,
#Partially deleted in new
chr15	74720719	74725491	chr15:74720719-74725491	0	-	74722334	74723097	0	8	55,87,124,90,479,69,589,51,	0,247,479,694,871,1553,1815,4721,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	74748843	74756202	chr15:74748843-74756202	3	+	74749738	74755088	789624	7	54,840,121,90,124,87,1412,	0,886,2345,2921,3280,4340,5947,
#Partially deleted in new
chr15	74782056	74803198	chr15:74782056-74803198	3	+	74798297	74802513	0	13	664,80,114,113,220,94,66,100,91,74,196,87,868,	0,16176,16558,16769,17215,18355,18624,18766,18955,19465,19638,19940,20274,
#Partially deleted in new
chr15	74782088	74802882	chr15:74782088-74802882	1	+	74798297	74802513	0	14	60,53,80,114,113,220,94,66,100,91,74,196,87,552,	0,579,16144,16526,16737,17183,18323,18592,18734,18923,19433,19606,19908,20242,
#Partially deleted in new
chr15	74782503	74799051	chr15:74782503-74799051	0	+	74782503	74782503	8553170	2	217,819,	0,15729,
#Partially deleted in new
chr15	74782591	74799471	chr15:74782591-74799471	0	+	74798933	74799471	789624	4	129,114,113,200,	0,16023,16234,16680,
#Partially deleted in new
chr15	74782604	74799361	chr15:74782604-74799361	0	+	74798297	74799361	789624	5	116,101,114,113,90,	0,15607,16010,16221,16667,
#Partially deleted in new
chr15	74788543	74803171	chr15:74788543-74803171	1	+	74798297	74802513	0	15	34,130,203,80,114,113,220,94,66,100,91,74,196,87,841,	0,2273,4502,9689,10071,10282,10728,11868,12137,12279,12468,12978,13151,13453,13787,
#Deleted in new
chr15	74788671	74788757	chr15:74788671-74788757	3	-	74788671	74788671	5263520	1	86,	0,
#Deleted in new
chr15	74797913	74798890	chr15:74797913-74798890	0	+	74798297	74798890	789624	3	399,114,65,	0,701,912,
#Deleted in new
chr15	74798435	74799398	chr15:74798435-74799398	0	+	74798435	74798435	8553170	3	293,113,127,	0,390,836,
#Deleted in new
chr15	74798651	74802589	chr15:74798651-74802589	0	+	74798651	74798651	8553170	10	77,113,220,335,100,91,74,196,87,259,	0,174,620,1760,2171,2360,2870,3043,3345,3679,
#Deleted in new
chr15	74799177	74801823	chr15:74799177-74801823	0	+	74799177	74799177	8553170	7	314,94,66,100,91,74,129,	0,1234,1503,1645,1834,2344,2517,
#Deleted in new
chr15	74800474	74802557	chr15:74800474-74802557	0	+	74800474	74800474	8553170	7	31,66,100,91,74,389,227,	0,206,348,537,1047,1220,1856,
#Deleted in new
chr15	74800488	74801729	chr15:74800488-74801729	0	+	74800488	74800488	8553170	5	17,242,91,74,35,	0,192,523,1033,1206,
#Deleted in new
chr15	74800851	74802030	chr15:74800851-74802030	0	+	74800851	74800851	8553170	4	251,74,196,34,	0,670,843,1145,
#Deleted in new
chr15	74801629	74802597	chr15:74801629-74802597	0	+	74801629	74801629	8553170	2	454,267,	0,701,
#Partially deleted in new
chr15	74812715	74825758	chr15:74812715-74825758	3	+	74812854	74825605	789624	14	314,155,108,59,100,121,56,133,152,72,68,124,128,283,	0,3441,3711,3916,6002,6436,7328,7919,8359,9113,9926,10843,11635,12760,
#Partially deleted in new
chr15	74812715	74819899	chr15:74812715-74819899	0	+	74812715	74812715	8553170	7	148,80,155,108,59,100,748,	0,234,3441,3711,3916,6002,6436,
#Partially deleted in new
chr15	74812716	74816494	chr15:74812716-74816494	0	+	74812716	74812716	8553170	3	147,80,338,	0,233,3440,
#Partially deleted in new
chr15	74812811	74816450	chr15:74812811-74816450	0	+	74812811	74812811	8553170	3	218,60,294,	0,608,3345,
#Partially deleted in new
chr15	74812815	74816652	chr15:74812815-74816652	0	+	74813436	74816652	789624	6	48,80,143,155,108,21,	0,134,521,3341,3611,3816,
#Partially deleted in new
chr15	74812817	74819974	chr15:74812817-74819974	0	+	74812817	74812817	8553170	6	46,80,155,59,100,823,	0,132,3339,3814,5900,6334,
#Partially deleted in new
chr15	74812852	74825757	chr15:74812852-74825757	1	+	74812854	74825605	789624	13	177,155,108,59,100,141,133,152,72,68,124,128,282,	0,3304,3574,3779,5865,6299,7782,8222,8976,9789,10706,11498,12623,
#Partially deleted in new
chr15	74816222	74831233	chr15:74816222-74831233	0	+	74816222	74816222	8553170	14	89,108,59,100,948,133,152,72,68,124,128,1392,88,1104,	0,204,409,2495,2929,4412,4852,5606,6419,7336,8128,9253,11811,13907,
#Partially deleted in new
chr15	74819466	74825754	chr15:74819466-74825754	0	+	74819466	74819466	8553170	6	1301,152,72,68,920,282,	0,1608,2362,3175,4092,6006,
#Partially deleted in new
chr15	74821073	74831795	chr15:74821073-74831795	3	+	74821073	74821073	8553170	6	153,72,68,3309,88,1666,	0,755,1568,2485,6960,9056,
#Partially deleted in new
chr15	74821124	74825754	chr15:74821124-74825754	0	+	74821124	74825605	789624	4	102,72,68,279,	0,704,1517,4351,
#Deleted in new
chr15	74824187	74825754	chr15:74824187-74825754	0	+	74824187	74824187	8553170	2	291,282,	0,1285,
#Partially deleted in new
chr15	74826546	74831802	chr15:74826546-74831802	3	+	74826703	74830354	789624	3	321,88,1673,	0,1487,3583,
#Deleted in new
chr15	74836115	74843197	chr15:74836115-74843197	3	-	74837227	74843105	0	16	1129,67,48,41,79,65,103,41,106,156,83,144,105,121,141,194,	0,1253,1635,2036,2150,2324,2527,2894,3152,3442,4118,4382,5289,5959,6164,6888,
#Deleted in new
chr15	74836117	74843139	chr15:74836117-74843139	0	-	74836117	74836117	789624	15	1127,67,42,41,79,65,103,41,106,156,408,105,121,141,136,	0,1251,1639,2034,2148,2322,2525,2892,3150,3440,4116,5287,5957,6162,6886,
#Deleted in new
chr15	74836117	74843129	chr15:74836117-74843129	0	-	74836117	74836117	789624	15	1127,67,48,22,79,65,103,41,106,156,408,105,121,141,126,	0,1251,1633,2034,2148,2322,2525,2892,3150,3440,4116,5287,5957,6162,6886,
#Deleted in new
chr15	74836117	74843193	chr15:74836117-74843193	1	-	74837227	74843105	0	16	1127,67,42,41,79,65,103,41,106,156,83,144,105,121,141,190,	0,1251,1639,2034,2148,2322,2525,2892,3150,3440,4116,4380,5287,5957,6162,6886,
#Deleted in new
chr15	74836117	74843346	chr15:74836117-74843346	0	-	74836117	74836117	789624	15	1127,67,48,41,79,65,103,41,106,156,408,105,121,141,343,	0,1251,1633,2034,2148,2322,2525,2892,3150,3440,4116,5287,5957,6162,6886,
#Deleted in new
chr15	74836131	74843124	chr15:74836131-74843124	0	-	74842650	74843105	8553170	17	1113,67,48,41,79,65,103,41,106,156,83,144,105,121,141,140,121,	0,1237,1619,2020,2134,2308,2511,2878,3136,3426,4102,4366,5273,5943,6148,6403,6872,
#Deleted in new
chr15	74836632	74838512	chr15:74836632-74838512	0	-	74836632	74836632	8553170	5	612,67,48,41,73,	0,736,1118,1519,1807,
#Deleted in new
chr15	74836804	74837956	chr15:74836804-74837956	0	-	74836804	74836804	8553170	3	440,67,200,	0,564,952,
#Deleted in new
chr15	74836892	74842676	chr15:74836892-74842676	0	-	74842406	74842673	789624	16	352,67,42,41,79,65,103,41,106,156,83,144,105,44,141,142,	0,476,864,1259,1373,1547,1750,2117,2375,2665,3341,3605,4512,5182,5387,5642,
#Deleted in new
chr15	74836963	74842676	chr15:74836963-74842676	0	-	74842406	74842673	789624	16	281,67,42,41,79,65,103,41,106,156,83,144,105,121,141,142,	0,405,793,1188,1302,1476,1679,2046,2304,2594,3270,3534,4441,5111,5316,5571,
#Deleted in new
chr15	74836972	74843141	chr15:74836972-74843141	0	-	74842106	74843105	789624	16	272,67,48,41,79,65,103,41,106,156,83,144,105,44,141,138,	0,396,778,1179,1293,1467,1670,2037,2295,2585,3261,3525,4432,5102,5307,6031,
#Deleted in new
chr15	74837198	74843124	chr15:74837198-74843124	0	-	74837198	74837198	8553170	14	46,67,48,41,65,103,41,106,156,408,101,121,141,121,	0,170,552,953,1241,1444,1811,2069,2359,3035,4206,4876,5081,5805,
#Deleted in new
chr15	74837212	74842676	chr15:74837212-74842676	1	-	74837227	74842673	0	16	32,67,48,41,79,65,103,41,106,156,83,144,105,121,141,138,	0,156,538,939,1053,1227,1430,1797,2055,2345,3021,3285,4192,4862,5067,5326,
#Deleted in new
chr15	74839522	74843163	chr15:74839522-74843163	0	-	74839522	74839522	8553170	7	191,83,144,105,121,138,160,	0,711,975,1882,2552,2757,3481,
#Deleted in new
chr15	74840241	74843124	chr15:74840241-74843124	0	-	74841458	74843105	789624	5	400,101,121,141,121,	0,1163,1833,2038,2762,
#Deleted in new
chr15	74840264	74842676	chr15:74840264-74842676	0	-	74840264	74840264	8553170	5	377,105,121,141,142,	0,1140,1810,2015,2270,
#Deleted in new
chr15	74840296	74843211	chr15:74840296-74843211	0	-	74840296	74840296	8553170	4	345,105,346,208,	0,1108,1778,2707,
#Deleted in new
chr15	74840318	74842676	chr15:74840318-74842676	0	-	74840318	74840318	8553170	4	323,105,346,142,	0,1086,1756,2216,
#Deleted in new
chr15	74840586	74842676	chr15:74840586-74842676	0	-	74842406	74842673	789624	5	55,105,121,138,142,	0,818,1488,1693,1948,
#Deleted in new
chr15	74840594	74842698	chr15:74840594-74842698	0	-	74842419	74842673	789624	5	47,105,121,141,153,	0,810,1480,1685,1951,
#Deleted in new
chr15	74840614	74842676	chr15:74840614-74842676	0	-	74842398	74842673	789624	5	27,105,121,170,138,	0,790,1460,1665,1924,
#Deleted in new
chr15	74840641	74840707	chr15:74840641-74840707	3	-	74840641	74840641	5263520	1	66,	0,
#Deleted in new
chr15	74841448	74842676	chr15:74841448-74842676	0	-	74841448	74841448	8553170	3	61,121,397,	0,626,831,
#Deleted in new
chr15	74841493	74843124	chr15:74841493-74843124	0	-	74842650	74843105	789624	5	16,121,141,140,121,	0,581,786,1041,1510,
#Deleted in new
chr15	74842650	74843105	chr15:74842650-74843105	1	-	74842650	74843105	789624	2	24,102,	0,353,
#Partially deleted in new
chr15	74843729	74873365	chr15:74843729-74873365	3	-	74845082	74873255	789624	9	1488,121,102,160,129,118,99,69,167,	0,1743,4870,6784,7623,8339,10291,10851,29469,
#Partially deleted in new
chr15	74843731	74854586	chr15:74843731-74854586	0	-	74845370	74854586	789624	7	1862,102,160,129,118,99,6,	0,4868,6782,7621,8337,10289,10849,
#Partially deleted in new
chr15	74843763	74873355	chr15:74843763-74873355	0	-	74845531	74873255	789624	4	1454,107,69,157,	0,1709,10817,29435,
#Partially deleted in new
chr15	74844854	74873365	chr15:74844854-74873365	0	-	74844854	74844854	8553170	8	363,121,102,160,129,2051,69,167,	0,618,3745,5659,6498,7214,9726,28344,
#Partially deleted in new
chr15	74845007	74852213	chr15:74845007-74852213	0	-	74845007	74845007	8553170	6	210,121,102,160,129,145,	0,465,3592,5506,6345,7061,
#Partially deleted in new
chr15	74845205	74873302	chr15:74845205-74873302	0	-	74845560	74873255	789624	9	12,121,46,160,129,118,99,69,104,	0,267,3394,5308,6147,6863,8815,9375,27993,
#Partially deleted in new
chr15	74848425	74852181	chr15:74848425-74852181	0	-	74848425	74848425	8553170	4	276,160,129,113,	0,2088,2927,3643,
#Partially deleted in new
chr15	74848603	74873040	chr15:74848603-74873040	0	-	74848603	74851374	789624	7	98,160,129,118,99,69,117,	0,1910,2749,3465,5417,5977,24320,
#Partially deleted in new
chr15	74848681	74873310	chr15:74848681-74873310	0	-	74848681	74873255	789624	6	20,160,129,118,99,112,	0,1832,2671,3387,5339,24517,
#Partially deleted in new
chr15	74850511	74873358	chr15:74850511-74873358	0	-	74850511	74873255	789624	7	162,129,118,129,99,69,160,	0,841,1557,2856,3509,4069,22687,
#Partially deleted in new
chr15	74851903	74873332	chr15:74851903-74873332	0	-	74851903	74851903	8553170	4	283,99,69,134,	0,2117,2677,21295,
#Partially deleted in new
chr15	74853756	74873029	chr15:74853756-74873029	0	-	74853756	74853756	8553170	3	363,69,106,	0,824,19167,
#Partially deleted in new
chr15	74890004	74897092	chr15:74890004-74897092	0	+	74890570	74897092	789624	7	85,102,201,142,183,174,82,	0,548,1374,2656,3133,6147,7006,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	74890006	74902219	chr15:74890006-74902219	3	+	74890073	74897730	789624	8	83,128,201,142,183,174,209,4708,	0,520,1372,2654,3131,6145,7004,7505,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	74890038	74899441	chr15:74890038-74899441	1	+	74890073	74897531	789624	7	51,128,201,142,183,174,1930,	0,488,1340,2622,3099,6113,7473,
#Partially deleted in new
chr15	74890041	74898228	chr15:74890041-74898228	1	+	74890073	74897730	789624	7	48,128,201,142,174,209,717,	0,485,1337,2619,6110,6969,7470,
#Partially deleted in new
chr15	74890041	74898077	chr15:74890041-74898077	1	+	74891384	74897730	789624	7	48,201,142,183,174,209,566,	0,1337,2619,3096,6110,6969,7470,
#Partially deleted in new
chr15	74890041	74896188	chr15:74890041-74896188	0	+	74890073	74890614	789624	6	160,128,201,142,183,37,	0,485,1337,2619,3096,6110,
#Partially deleted in new
chr15	74890041	74897658	chr15:74890041-74897658	0	+	74890073	74897658	789624	4	48,128,111,120,	0,485,1337,7497,
#Partially deleted in new
chr15	74890041	74896930	chr15:74890041-74896930	1	+	74890073	74896501	789624	6	48,128,201,142,183,779,	0,485,1337,2619,3096,6110,
#Partially deleted in new
chr15	74890041	74898044	chr15:74890041-74898044	1	+	74890570	74897730	789624	8	48,217,201,142,183,174,209,533,	0,396,1337,2619,3096,6110,6969,7470,
#Partially deleted in new
chr15	74890041	74896955	chr15:74890041-74896955	1	+	74891384	74896501	789624	4	48,201,142,804,	0,1337,2619,6110,
#Partially deleted in new
chr15	74890041	74893230	chr15:74890041-74893230	0	+	74890570	74893230	789624	5	48,99,201,142,93,	0,514,1337,2619,3096,
#Partially deleted in new
chr15	74890041	74893219	chr15:74890041-74893219	0	+	74890073	74893219	789624	5	48,128,186,115,82,	0,485,1337,2646,3096,
#Partially deleted in new
chr15	74890041	74893245	chr15:74890041-74893245	0	+	74890073	74893245	789624	5	48,128,111,142,108,	0,485,1337,2619,3096,
#Partially deleted in new
chr15	74890041	74892781	chr15:74890041-74892781	0	+	74890073	74892781	789624	5	48,128,57,201,121,	0,485,937,1337,2619,
#Partially deleted in new
chr15	74890042	74892870	chr15:74890042-74892870	0	+	74890042	74890042	8553170	4	47,128,201,210,	0,484,1336,2618,
#Partially deleted in new
chr15	74890045	74890973	chr15:74890045-74890973	0	+	74890045	74890045	8553170	2	44,536,	0,392,
#Partially deleted in new
chr15	74890051	74893242	chr15:74890051-74893242	0	+	74890073	74893242	789624	5	38,128,165,142,105,	0,475,1363,2609,3086,
#Partially deleted in new
chr15	74890052	74896538	chr15:74890052-74896538	1	+	74890570	74896501	789624	6	37,102,201,142,183,387,	0,500,1326,2608,3085,6099,
#Partially deleted in new
chr15	74890061	74893786	chr15:74890061-74893786	1	+	74890073	74893445	789624	5	28,128,201,142,649,	0,465,1317,2599,3076,
#Partially deleted in new
chr15	74890071	74892733	chr15:74890071-74892733	0	+	74890570	74892733	789624	3	583,201,73,	0,1307,2589,
#Partially deleted in new
chr15	74890076	74893088	chr15:74890076-74893088	0	+	74890076	74890076	8553170	4	125,128,201,428,	0,450,1302,2584,
#Partially deleted in new
chr15	74890549	74897957	chr15:74890549-74897957	0	+	74890549	74897531	789624	5	105,201,142,174,446,	0,829,2111,5602,6962,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	74895433	74898228	chr15:74895433-74898228	0	+	74895433	74895433	8553170	1	2795,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	74899986	74907121	chr15:74899986-74907121	3	-	74902618	74906800	789624	5	2800,49,78,88,535,	0,4677,5167,6291,6600,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	74899991	74906837	chr15:74899991-74906837	1	-	74902618	74906800	789624	6	2072,183,49,78,88,251,	0,2612,4672,5162,6286,6595,
#Partially deleted in new
chr15	74899991	74906793	chr15:74899991-74906793	0	-	74902618	74906793	789624	7	146,114,183,49,78,88,207,	0,1958,2612,4672,5162,6286,6595,
#Deleted in new
chr15	74899991	74900689	chr15:74899991-74900689	0	+	74899991	74899991	8553170	2	209,206,	0,492,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	74899991	74905025	chr15:74899991-74905025	0	-	74904992	74905025	789624	6	146,88,114,183,49,44,	0,1177,1958,2612,4672,4990,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	74899991	74906883	chr15:74899991-74906883	0	-	74905223	74906800	789624	4	2795,49,78,297,	0,4672,5162,6595,
#Deleted in new
chr15	74899992	74900571	chr15:74899992-74900571	0	-	74899992	74899992	8553170	2	145,63,	0,516,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	74899992	74906796	chr15:74899992-74906796	0	-	74899992	74899992	8553170	3	2794,1702,210,	0,4671,6594,
#Partially deleted in new
chr15	74901821	74906880	chr15:74901821-74906880	0	-	74904992	74906800	789624	6	965,49,78,78,88,294,	0,2842,3160,3332,4456,4765,
#Partially deleted in new
chr15	74901919	74906805	chr15:74901919-74906805	0	-	74905223	74906800	789624	5	144,183,49,78,219,	0,684,2744,3234,4667,
#Partially deleted in new
chr15	74902000	74906613	chr15:74902000-74906613	1	-	74902618	74906321	789624	4	786,49,78,336,	0,2663,3153,4277,
#Partially deleted in new
chr15	74902099	74906842	chr15:74902099-74906842	0	-	74905223	74906800	789624	5	684,49,78,78,256,	0,2564,2882,3054,4487,
#Partially deleted in new
chr15	74902468	74906883	chr15:74902468-74906883	0	-	74905223	74906800	789624	4	318,49,78,297,	0,2195,2685,4118,
#Partially deleted in new
chr15	74902515	74906848	chr15:74902515-74906848	0	-	74905223	74906800	789624	5	268,49,78,42,262,	0,2148,2638,3808,4071,
#Partially deleted in new
chr15	74902529	74906730	chr15:74902529-74906730	0	-	74902529	74902529	8553170	4	257,568,88,144,	0,2134,3748,4057,
#Partially deleted in new
chr15	74902603	74906341	chr15:74902603-74906341	0	-	74904992	74906341	789624	5	180,49,78,78,64,	0,2060,2378,2550,3674,
#Partially deleted in new
chr15	74902625	74906880	chr15:74902625-74906880	0	-	74905223	74906800	789624	3	161,78,294,	0,2528,3961,
#Partially deleted in new
chr15	74902703	74906220	chr15:74902703-74906220	0	-	74902703	74902703	8553170	4	83,49,78,372,	0,1960,2450,3145,
#Partially deleted in new
chr15	74902708	74906883	chr15:74902708-74906883	0	-	74902708	74906800	789624	5	75,49,78,88,297,	0,1955,2445,3569,3878,
#Partially deleted in new
chr15	74902709	74906807	chr15:74902709-74906807	0	-	74905023	74906800	789624	6	74,49,58,78,88,221,	0,1954,2272,2444,3568,3877,
#Partially deleted in new
chr15	74919790	74938168	chr15:74919790-74938168	3	-	74923656	74938014	789624	5	652,123,122,117,254,	0,3857,6975,9325,18124,
#Partially deleted in new
chr15	74920274	74938070	chr15:74920274-74938070	1	-	74920404	74938014	789624	3	168,117,156,	0,8841,17640,
#Partially deleted in new
chr15	74920274	74938080	chr15:74920274-74938080	1	-	74923656	74938014	789624	4	168,123,122,166,	0,3373,6491,17640,
#Partially deleted in new
chr15	74920279	74938083	chr15:74920279-74938083	1	-	74920319	74938014	789624	4	163,122,117,169,	0,6486,8836,17635,
#Partially deleted in new
chr15	74920311	74937776	chr15:74920311-74937776	1	-	74923656	74926861	789624	5	131,123,122,117,89,	0,3336,6454,8804,17376,
#Partially deleted in new
chr15	74923593	74938066	chr15:74923593-74938066	1	-	74923656	74938014	789624	4	177,122,117,152,	0,3172,5522,14321,
#Deleted in new
chr15	74954415	74957464	chr15:74954415-74957464	3	-	74955983	74956583	0	1	3049,	0,
#Partially deleted in new
chr15	74957218	75019277	chr15:74957218-75019277	0	+	75011839	75017871	789624	6	249,55,129,102,118,489,	0,54573,55458,60651,61199,61570,
#Partially deleted in new
chr15	74976239	74976573	chr15:74976239-74976573	7	-	74976239	74976239	16724991	1	334,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	74983273	74983376	chr15:74983273-74983376	3	-	74983273	74983273	8553170	1	103,	0,
#Partially deleted in new
chr15	74995531	75021496	chr15:74995531-75021496	3	+	75011839	75018983	789624	7	142,55,129,157,102,118,2708,	0,16260,17145,21061,22338,22886,23257,
#Partially deleted in new
chr15	74995541	75017925	chr15:74995541-75017925	0	+	75011839	75017925	789624	6	132,50,55,129,157,56,	0,14349,16250,17135,21051,22328,
#Partially deleted in new
chr15	74995563	75021493	chr15:74995563-75021493	1	+	75011839	75018983	789624	7	110,55,129,157,102,142,2705,	0,16228,17113,21029,22306,22830,23225,
#Partially deleted in new
chr15	74995569	75017941	chr15:74995569-75017941	0	+	74995569	74995569	8553170	5	104,55,129,157,145,	0,16222,17107,21023,22227,
#Partially deleted in new
chr15	74995572	75019489	chr15:74995572-75019489	0	+	75011839	75017871	789624	6	101,55,129,102,118,701,	0,16219,17104,22297,22845,23216,
#Partially deleted in new
chr15	74995583	75013124	chr15:74995583-75013124	0	+	74995583	74995583	8553170	3	90,55,448,	0,16208,17093,
#Partially deleted in new
chr15	74995597	75021495	chr15:74995597-75021495	1	+	75011839	75018983	789624	8	76,83,55,129,157,102,118,2707,	0,1636,16194,17079,20995,22272,22820,23191,
#Partially deleted in new
chr15	74995597	75018537	chr15:74995597-75018537	0	+	75011839	75017871	789624	6	76,50,55,129,102,120,	0,14293,16194,17079,22272,22820,
#Partially deleted in new
chr15	74995966	75017946	chr15:74995966-75017946	0	+	74995966	74995966	8553170	4	293,55,129,77,	0,15825,16710,21903,
#Partially deleted in new
chr15	74996022	75016664	chr15:74996022-75016664	0	+	75011839	75016664	789624	4	298,55,129,72,	0,15769,16654,20570,
#Partially deleted in new
chr15	75011657	75018467	chr15:75011657-75018467	0	+	75011839	75018467	789624	6	23,55,129,157,102,50,	0,134,1019,4935,6212,6760,
#Partially deleted in new
chr15	75011806	75019341	chr15:75011806-75019341	0	+	75011839	75017871	789624	5	40,129,102,142,553,	0,870,6063,6587,6982,
#Deleted in new
chr15	75017652	75019061	chr15:75017652-75019061	1	+	75017777	75018983	789624	3	319,118,273,	0,765,1136,
#Deleted in new
chr15	75022979	75023256	chr15:75022979-75023256	7	+	75022979	75022979	16724991	1	277,	0,
#Partially deleted in new
chr15	75023554	75050726	chr15:75023554-75050726	3	+	75028318	75049235	0	6	72,207,96,129,169,1577,	0,4692,19886,20831,24998,25595,
#Partially deleted in new
chr15	75023585	75045168	chr15:75023585-75045168	0	+	75023585	75023585	8553170	4	41,207,96,783,	0,4661,19855,20800,
#Partially deleted in new
chr15	75023586	75049490	chr15:75023586-75049490	1	+	75028318	75049235	789624	4	40,207,169,341,	0,4660,24966,25563,
#Partially deleted in new
chr15	75023589	75049182	chr15:75023589-75049182	0	+	75048561	75049182	789624	5	37,96,129,169,33,	0,19851,20796,24963,25560,
#Partially deleted in new
chr15	75023599	75043726	chr15:75023599-75043726	0	+	75023599	75023599	8553170	2	27,286,	0,19841,
#Partially deleted in new
chr15	75023604	75049581	chr15:75023604-75049581	1	+	75028318	75049235	789624	5	22,207,96,169,432,	0,4642,19836,24948,25545,
#Partially deleted in new
chr15	75028171	75043492	chr15:75028171-75043492	0	+	75028318	75043492	789624	2	282,52,	0,15269,
#Partially deleted in new
chr15	75028248	75049538	chr15:75028248-75049538	1	+	75028318	75049235	789624	4	205,129,169,389,	0,16137,20304,20901,
#Partially deleted in new
chr15	75043274	75049738	chr15:75043274-75049738	1	+	75048561	75049235	789624	4	262,129,169,589,	0,1111,5278,5875,
#Deleted in new
chr15	75043285	75044623	chr15:75043285-75044623	0	+	75043285	75043285	8553170	2	251,238,	0,1100,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	75049681	75117462	chr15:75049681-75117462	0	+	75049681	75049681	8553170	3	30,103,343,	0,9962,67438,
#Partially deleted in new
chr15	75114260	75114868	chr15:75114260-75114868	7	+	75114260	75114260	16724991	1	608,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	75120264	75120562	chr15:75120264-75120562	3	-	75120264	75120264	8553170	1	298,	0,
#Partially deleted in new
chr15	75121535	75121666	chr15:75121535-75121666	3	-	75121535	75121535	8553170	1	131,	0,
#Deleted in new
chr15	75186650	75186968	chr15:75186650-75186968	7	-	75186650	75186650	16724991	1	318,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	75195642	75206112	chr15:75195642-75206112	0	+	75206048	75206112	789624	4	93,275,99,114,	0,3244,6318,10356,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	75198865	75206135	chr15:75198865-75206135	0	+	75206048	75206135	789624	3	296,99,137,	0,3095,7133,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	75198891	75212169	chr15:75198891-75212169	3	+	75206048	75211116	789624	3	270,2826,1421,	0,7107,11857,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	75201876	75212169	chr15:75201876-75212169	1	+	75206048	75211116	789624	3	183,2826,1421,	0,4122,8872,
#Partially deleted in new
chr15	75202204	75206129	chr15:75202204-75206129	0	+	75206048	75206129	789624	2	222,131,	0,3794,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	75206048	75212169	chr15:75206048-75212169	1	+	75206048	75208865	789624	2	2828,1421,	0,4700,
#Deleted in new
chr15	75206443	75209595	chr15:75206443-75209595	0	+	75206443	75208865	789624	1	3152,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	75211300	75212167	chr15:75211300-75212167	3	-	75211300	75211300	8553170	2	135,71,	0,796,
#Partially deleted in new
chr15	75226400	75234834	chr15:75226400-75234834	7	-	75226400	75226400	16724991	10	146,59,125,140,65,131,158,62,1628,43,	0,285,458,2012,2449,2834,3137,4637,5977,8391,
#Partially deleted in new
chr15	75226752	75229690	chr15:75226752-75229690	4	-	75226752	75226752	16724991	5	231,140,65,131,153,	0,1660,2097,2482,2785,
#Partially deleted in new
chr15	75229317	75233951	chr15:75229317-75233951	4	-	75229317	75229317	16724991	3	48,141,445,	0,3060,4189,
#Partially deleted in new
chr15	75249231	75249407	chr15:75249231-75249407	7	-	75249231	75249231	16724991	1	176,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	75251742	75252934	chr15:75251742-75252934	7	-	75251742	75251742	16724991	1	1192,	0,
#Partially deleted in new
chr15	75258598	75270199	chr15:75258598-75270199	3	+	75258598	75270199	789624	18	84,120,81,39,51,82,107,87,108,88,509,69,76,92,103,104,154,128,	0,1774,3813,4749,5049,5200,5378,6523,6718,7018,7506,8291,9690,10198,10854,11040,11233,11473,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	75268429	75268652	chr15:75268429-75268652	3	+	75268429	75268429	8553170	1	223,	0,
#Partially deleted in new
chr15	75282834	75294475	chr15:75282834-75294475	3	+	75282875	75294475	789624	18	125,120,81,39,51,82,107,87,108,88,509,69,76,92,103,104,154,128,	0,1815,3858,4794,5094,5245,5423,6562,6757,7057,7546,8331,9730,10238,10894,11080,11273,11513,
#Partially deleted in new
chr15	75286692	75295807	chr15:75286692-75295807	1	+	75286692	75294475	789624	16	81,39,51,82,107,87,108,88,509,69,76,92,103,104,154,1460,	0,936,1236,1387,1565,2704,2899,3199,3688,4473,5872,6380,7036,7222,7415,7655,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	75292705	75292928	chr15:75292705-75292928	3	+	75292705	75292705	8553170	1	223,	0,
#Partially deleted in new
chr15	75299952	75302965	chr15:75299952-75302965	7	-	75299952	75299952	16724991	2	1783,493,	0,2520,
#Partially deleted in new
chr15	75301641	75302664	chr15:75301641-75302664	5	-	75301641	75301641	16724991	2	94,221,	0,802,
#Deleted in new
chr15	75321396	75322693	chr15:75321396-75322693	7	-	75321396	75321396	16724991	1	1297,	0,
#Deleted in new
chr15	75321772	75322509	chr15:75321772-75322509	5	-	75321772	75321772	16724991	1	737,	0,
#Partially deleted in new
chr15	75335890	75340273	chr15:75335890-75340273	3	+	75336089	75340005	789624	8	202,72,66,40,120,81,177,309,	0,2171,2464,2755,3094,3373,3811,4074,
#Partially deleted in new
chr15	75336019	75340270	chr15:75336019-75340270	1	+	75336089	75340005	789624	6	73,72,66,40,120,306,	0,2042,2335,2626,2965,3945,
#Partially deleted in new
chr15	75336020	75340273	chr15:75336020-75340273	0	+	75336020	75336020	8553170	2	72,2212,	0,2041,
#Partially deleted in new
chr15	75336052	75340073	chr15:75336052-75340073	1	+	75336089	75340005	789624	7	40,72,40,120,81,177,109,	0,2009,2593,2932,3211,3649,3912,
#Partially deleted in new
chr15	75336053	75340271	chr15:75336053-75340271	0	+	75336089	75339704	789624	8	39,72,66,40,68,81,177,307,	0,2008,2301,2592,2983,3210,3648,3911,
#Partially deleted in new
chr15	75336058	75340273	chr15:75336058-75340273	1	+	75336089	75340005	789624	7	34,72,66,40,120,81,309,	0,2003,2296,2587,2926,3205,3906,
#Partially deleted in new
chr15	75336059	75339400	chr15:75336059-75339400	0	+	75336059	75336059	8553170	4	33,72,66,755,	0,2002,2295,2586,
#Partially deleted in new
chr15	75336060	75339764	chr15:75336060-75339764	0	+	75336089	75338593	789624	7	32,72,66,110,120,81,63,	0,2001,2294,2515,2924,3203,3641,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	75336062	75340266	chr15:75336062-75340266	0	+	75336062	75336062	8553170	1	4204,	0,
#Partially deleted in new
chr15	75336062	75338840	chr15:75336062-75338840	0	+	75336062	75336062	8553170	3	30,72,486,	0,1999,2292,
#Partially deleted in new
chr15	75336062	75339307	chr15:75336062-75339307	0	+	75336062	75336062	8553170	5	30,77,66,40,323,	0,1999,2292,2583,2922,
#Partially deleted in new
chr15	75336062	75338746	chr15:75336062-75338746	0	+	75336062	75336062	8553170	3	30,359,101,	0,1999,2583,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	75336075	75343224	chr15:75336075-75343224	0	+	75336089	75340005	789624	9	17,72,66,40,120,81,177,256,2396,	0,1986,2279,2570,2909,3188,3626,3889,4753,
#Partially deleted in new
chr15	75336083	75339552	chr15:75336083-75339552	0	+	75336083	75336083	8553170	4	9,359,40,568,	0,1978,2562,2901,
#Partially deleted in new
chr15	75336085	75338374	chr15:75336085-75338374	0	+	75336085	75336085	8553170	3	390,72,20,	0,1976,2269,
#Partially deleted in new
chr15	75336085	75339010	chr15:75336085-75339010	0	+	75336085	75336085	8553170	2	136,949,	0,1976,
#Partially deleted in new
chr15	75336086	75339777	chr15:75336086-75339777	0	+	75336137	75339777	789624	5	144,40,120,81,76,	0,2559,2898,3177,3615,
#Partially deleted in new
chr15	75336098	75340271	chr15:75336098-75340271	1	+	75336137	75340005	789624	6	132,66,40,120,81,307,	0,2256,2547,2886,3165,3866,
#Partially deleted in new
chr15	75336104	75339871	chr15:75336104-75339871	0	+	75336137	75339871	789624	7	117,72,66,40,120,81,170,	0,1957,2250,2541,2880,3159,3597,
#Partially deleted in new
chr15	75338060	75340116	chr15:75338060-75340116	0	+	75338060	75338060	8553170	3	625,894,152,	0,924,1904,
#Partially deleted in new
chr15	75338060	75339575	chr15:75338060-75339575	0	+	75338060	75338060	8553170	4	73,66,40,591,	0,294,585,924,
#Partially deleted in new
chr15	75338061	75340269	chr15:75338061-75340269	0	+	75338061	75338061	8553170	3	359,1233,305,	0,584,1903,
#Partially deleted in new
chr15	75338263	75340256	chr15:75338263-75340256	0	+	75338263	75338263	8553170	6	157,40,120,81,177,292,	0,382,721,1000,1438,1701,
#Partially deleted in new
chr15	75338480	75339863	chr15:75338480-75339863	0	+	75338480	75338480	8553170	4	205,120,81,162,	0,504,783,1221,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	75338553	75341198	chr15:75338553-75341198	0	+	75338553	75338553	8553170	2	132,370,	0,2275,
#Deleted in new
chr15	75346743	75347161	chr15:75346743-75347161	3	-	75346743	75346743	8553170	1	418,	0,
#Deleted in new
chr15	75346954	75348971	chr15:75346954-75348971	0	+	75348905	75348971	789624	4	156,271,68,88,	0,248,1004,1929,
#Partially deleted in new
chr15	75346989	75357114	chr15:75346989-75357114	3	+	75348905	75355034	0	10	484,456,120,64,100,128,28,62,166,2151,	0,1894,5121,5334,5612,6749,7260,7441,7663,7974,
#Deleted in new
chr15	75347012	75349098	chr15:75347012-75349098	0	+	75348905	75349098	789624	3	98,271,215,	0,190,1871,
#Deleted in new
chr15	75347037	75349057	chr15:75347037-75349057	0	+	75348905	75349057	789624	4	73,271,41,174,	0,165,921,1846,
#Deleted in new
chr15	75347052	75349170	chr15:75347052-75349170	0	+	75348905	75349170	789624	3	58,227,287,	0,194,1831,
#Deleted in new
chr15	75347068	75349024	chr15:75347068-75349024	0	+	75348905	75349024	789624	3	405,41,141,	0,890,1815,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	75347089	75355245	chr15:75347089-75355245	0	+	75347089	75347089	8553170	8	21,271,456,120,64,1891,166,282,	0,113,1794,5021,5234,5512,7563,7874,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	75347098	75352963	chr15:75347098-75352963	0	+	75347098	75347098	8553170	3	375,64,362,	0,5225,5503,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	75347341	75349690	chr15:75347341-75349690	0	+	75347341	75347341	8553170	2	132,807,	0,1542,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	75347382	75352179	chr15:75347382-75352179	0	+	75348905	75351325	789624	4	91,456,76,148,	0,1501,3918,4649,
#Deleted in new
chr15	75347391	75348222	chr15:75347391-75348222	0	+	75347391	75347391	8553170	2	82,264,	0,567,
#Partially deleted in new
chr15	75347434	75352230	chr15:75347434-75352230	0	+	75348905	75352230	789624	4	39,165,456,120,	0,400,1449,4676,
#Partially deleted in new
chr15	75347618	75355251	chr15:75347618-75355251	1	+	75348905	75355034	0	11	381,226,456,120,64,100,128,28,62,166,288,	0,802,1265,4492,4705,4983,6120,6631,6812,7034,7345,
#Partially deleted in new
chr15	75347637	75355247	chr15:75347637-75355247	1	+	75348905	75355034	0	10	389,456,120,64,100,128,28,62,166,284,	0,1246,4473,4686,4964,6101,6612,6793,7015,7326,
#Deleted in new
chr15	75347652	75348651	chr15:75347652-75348651	0	+	75347652	75347652	8553170	2	374,231,	0,768,
#Partially deleted in new
chr15	75347726	75352701	chr15:75347726-75352701	0	+	75348905	75352701	789624	5	145,68,456,64,100,	0,232,1157,4597,4875,
#Deleted in new
chr15	75347859	75349301	chr15:75347859-75349301	0	+	75348905	75349301	789624	2	140,418,	0,1024,
#Partially deleted in new
chr15	75347980	75352061	chr15:75347980-75352061	0	+	75348905	75352061	789624	3	46,456,30,	0,903,4051,
#Deleted in new
chr15	75348398	75349151	chr15:75348398-75349151	0	+	75348905	75349151	789624	2	325,268,	0,485,
#Partially deleted in new
chr15	75348934	75354292	chr15:75348934-75354292	0	+	75348934	75348934	8553170	4	405,64,100,43,	0,3389,3667,5315,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	75351945	75352977	chr15:75351945-75352977	0	+	75351945	75351945	8553170	3	285,64,376,	0,378,656,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	75353153	75355215	chr15:75353153-75355215	0	+	75353153	75353153	8553170	5	713,28,62,166,252,	0,1096,1277,1499,1810,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	75353390	75355247	chr15:75353390-75355247	0	+	75353390	75353390	8553170	4	476,243,166,284,	0,859,1262,1573,
#Partially deleted in new
chr15	75353610	75353685	chr15:75353610-75353685	3	-	75353610	75353610	5263520	1	75,	0,
#Partially deleted in new
chr15	75354602	75355245	chr15:75354602-75355245	0	+	75354602	75354602	8553170	2	216,282,	0,361,
#Partially deleted in new
chr15	75355206	75355650	chr15:75355206-75355650	0	-	75355206	75355206	8553170	1	444,	0,
#Partially deleted in new
chr15	75355209	75355800	chr15:75355209-75355800	0	-	75355209	75355209	8553170	2	163,234,	0,357,
#Partially deleted in new
chr15	75355791	75368630	chr15:75355791-75368630	3	-	75355905	75368583	789624	26	241,110,149,80,110,144,157,105,95,98,156,86,122,124,146,96,117,93,111,107,190,178,71,124,126,148,	0,318,509,814,1001,2409,2670,2912,3267,3536,3828,4111,4298,4773,5254,5494,5812,6063,6551,6850,8207,8696,10730,11719,12281,12691,
#Partially deleted in new
chr15	75355791	75356885	chr15:75355791-75356885	0	-	75355791	75355791	8553170	4	241,102,87,280,	0,318,502,814,
#Partially deleted in new
chr15	75355791	75368604	chr15:75355791-75368604	1	-	75355905	75368583	789624	24	241,110,149,80,110,144,157,105,95,98,156,86,122,124,146,96,117,93,111,178,71,124,126,122,	0,318,509,814,1001,2409,2670,2912,3267,3536,3828,4111,4298,4773,5254,5494,5812,6063,6551,8696,10730,11719,12281,12691,
#Partially deleted in new
chr15	75355791	75356957	chr15:75355791-75356957	0	-	75355791	75355791	8553170	4	241,102,156,352,	0,318,502,814,
#Partially deleted in new
chr15	75355791	75368595	chr15:75355791-75368595	1	-	75355905	75368583	789624	26	241,110,149,80,110,144,157,105,133,111,156,86,122,124,146,96,117,93,111,107,190,178,71,124,126,113,	0,318,509,814,1001,2409,2670,2912,3267,3536,3828,4111,4298,4773,5254,5494,5812,6063,6551,6850,8207,8696,10730,11719,12281,12691,
#Partially deleted in new
chr15	75355791	75368592	chr15:75355791-75368592	1	-	75355905	75368583	789624	26	241,110,80,80,110,144,157,105,95,98,156,86,122,124,146,96,117,93,111,107,190,178,71,124,126,110,	0,318,509,814,1001,2409,2670,2912,3267,3536,3828,4111,4298,4773,5254,5494,5812,6063,6551,6850,8207,8696,10730,11719,12281,12691,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	75355793	75357367	chr15:75355793-75357367	0	-	75355793	75355793	8553170	5	239,102,156,80,575,	0,316,500,812,999,
#Partially deleted in new
chr15	75355793	75359680	chr15:75355793-75359680	1	-	75355837	75359656	789624	12	194,43,110,149,80,110,144,157,105,95,98,61,	0,196,316,507,812,999,2407,2668,2910,3265,3534,3826,
#Partially deleted in new
chr15	75355804	75359100	chr15:75355804-75359100	0	-	75355804	75355804	8553170	7	228,102,156,297,144,347,42,	0,305,489,801,2396,2657,3254,
#Partially deleted in new
chr15	75356119	75357048	chr15:75356119-75357048	0	-	75356119	75356119	8553170	2	100,748,	0,181,
#Partially deleted in new
chr15	75356189	75356819	chr15:75356189-75356819	0	-	75356189	75356189	8553170	3	260,80,27,	0,416,603,
#Partially deleted in new
chr15	75356298	75359988	chr15:75356298-75359988	0	-	75356298	75356298	8553170	9	151,80,110,144,157,105,367,156,86,	0,307,494,1902,2163,2405,2760,3321,3604,
#Partially deleted in new
chr15	75356605	75359180	chr15:75356605-75359180	0	-	75356605	75356605	8553170	5	80,110,144,347,122,	0,187,1595,1856,2453,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	75357734	75363177	chr15:75357734-75363177	0	-	75357734	75357734	8553170	4	3457,435,93,835,	0,3551,4120,4608,
#Deleted in new
chr15	75358045	75358619	chr15:75358045-75358619	0	-	75358045	75358045	8553170	2	299,158,	0,416,
#Partially deleted in new
chr15	75358314	75368605	chr15:75358314-75368605	0	-	75358314	75358314	8553170	18	30,692,98,156,86,122,124,146,96,117,93,111,107,190,178,71,124,123,	0,147,1013,1305,1588,1775,2250,2731,2971,3289,3540,4028,4327,5684,6173,8207,9196,10168,
#Deleted in new
chr15	75358459	75359959	chr15:75358459-75359959	0	-	75358459	75358459	8553170	5	349,95,98,156,57,	0,599,868,1160,1443,
#Deleted in new
chr15	75358461	75359762	chr15:75358461-75359762	0	-	75358461	75358461	8553170	3	157,105,704,	0,242,597,
#Deleted in new
chr15	75358642	75359988	chr15:75358642-75359988	0	-	75358642	75358642	8553170	4	166,367,156,86,	0,416,977,1260,
#Deleted in new
chr15	75359116	75360061	chr15:75359116-75360061	0	-	75359116	75359116	8553170	2	659,159,	0,786,
#Deleted in new
chr15	75359341	75360126	chr15:75359341-75360126	0	-	75359341	75359341	8553170	3	434,86,37,	0,561,748,
#Deleted in new
chr15	75359620	75360523	chr15:75359620-75360523	0	-	75359620	75359620	8553170	3	155,86,434,	0,282,469,
#Partially deleted in new
chr15	75359622	75368605	chr15:75359622-75368605	0	-	75364127	75368583	789624	13	153,86,122,124,146,96,117,93,111,107,136,126,123,	0,280,467,942,1423,1663,1981,2232,2720,3019,4376,8450,8860,
#Deleted in new
chr15	75360118	75361062	chr15:75360118-75361062	0	-	75360118	75360118	8553170	2	93,498,	0,446,
#Deleted in new
chr15	75360631	75362172	chr15:75360631-75362172	0	-	75360631	75360631	8553170	5	57,146,96,117,318,	0,414,654,972,1223,
#Deleted in new
chr15	75360954	75362391	chr15:75360954-75362391	0	-	75360954	75360954	8553170	5	237,96,117,93,49,	0,331,649,900,1388,
#Deleted in new
chr15	75361096	75362212	chr15:75361096-75362212	0	-	75361096	75361096	8553170	5	95,96,117,93,148,	0,189,507,758,968,
#Deleted in new
chr15	75361097	75362174	chr15:75361097-75362174	0	-	75361097	75361097	8553170	3	94,435,320,	0,188,757,
#Deleted in new
chr15	75361295	75362637	chr15:75361295-75362637	0	-	75361295	75361295	8553170	4	86,117,93,295,	0,308,559,1047,
#Partially deleted in new
chr15	75361320	75368605	chr15:75361320-75368605	0	-	75362718	75368583	789624	10	61,117,93,111,107,178,71,124,126,123,	0,283,534,1022,1321,3167,5201,6190,6752,7162,
#Partially deleted in new
chr15	75361637	75366592	chr15:75361637-75366592	0	-	75363210	75366592	789624	8	83,171,111,107,81,190,178,71,	0,217,705,1004,1572,2361,2850,4884,
#Deleted in new
chr15	75361884	75363179	chr15:75361884-75363179	0	-	75361884	75361884	8553170	3	63,111,538,	0,458,757,
#Partially deleted in new
chr15	75362374	75368605	chr15:75362374-75368605	0	-	75364127	75368583	789624	5	79,107,136,126,123,	0,267,1624,5698,6108,
#Partially deleted in new
chr15	75362711	75368605	chr15:75362711-75368605	0	-	75362711	75362711	8553170	6	37,178,71,124,126,123,	0,1776,3810,4799,5361,5771,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	75363753	75364608	chr15:75363753-75364608	0	-	75363753	75363753	8553170	2	435,121,	0,734,
#Partially deleted in new
chr15	75364115	75368605	chr15:75364115-75368605	0	-	75364115	75368583	789624	5	73,178,71,124,123,	0,372,2406,3395,4367,
#Partially deleted in new
chr15	75364139	75368593	chr15:75364139-75368593	0	-	75364139	75364139	8553170	6	49,178,71,467,126,111,	0,348,2382,3371,3933,4343,
#Partially deleted in new
chr15	75364497	75368612	chr15:75364497-75368612	0	-	75364497	75368583	789624	5	168,71,124,87,130,	0,2024,3013,3575,3985,
#Partially deleted in new
chr15	75364525	75368612	chr15:75364525-75368612	0	-	75367602	75368583	789624	5	140,71,135,126,130,	0,1996,2985,3547,3957,
#Partially deleted in new
chr15	75366515	75368006	chr15:75366515-75368006	0	-	75366515	75366515	8553170	2	77,496,	0,995,
#Partially deleted in new
chr15	75366541	75368588	chr15:75366541-75368588	0	-	75366541	75366541	8553170	3	51,124,516,	0,969,1531,
#Partially deleted in new
chr15	75368154	75369584	chr15:75368154-75369584	3	+	75368154	75368154	8553170	1	1430,	0,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr15	75369378	75451704	chr15:75369378-75451704	1	-	75371978	75430375	0	21	2831,208,95,93,174,170,574,184,239,117,211,119,90,156,153,252,283,107,177,222,282,	0,6286,11250,12234,14885,20273,22863,25301,26879,30661,31351,32473,37676,40457,40755,42113,43384,44826,53268,60808,82044,
#Partially deleted in new
chr15	75370932	75455783	chr15:75370932-75455783	3	-	75371978	75430375	0	21	1277,208,95,93,174,170,574,184,239,117,211,119,90,156,153,252,283,107,177,222,149,	0,4732,9696,10680,13331,18719,21309,23747,25325,29107,29797,30919,36122,38903,39201,40559,41830,43272,51714,59254,84702,
#Partially deleted in new
chr15	75371129	75451585	chr15:75371129-75451585	1	-	75371978	75430375	0	21	1080,208,95,93,174,170,574,184,239,117,211,119,90,156,153,252,283,107,177,222,226,	0,4535,9499,10483,13134,18522,21112,23550,25128,28910,29600,30722,35925,38706,39004,40362,41633,43075,51517,59057,80230,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	75371981	75376380	chr15:75371981-75376380	0	-	75371981	75371981	8553170	2	228,716,	0,3683,
#Partially deleted in new
chr15	75375739	75381088	chr15:75375739-75381088	0	-	75375739	75375739	8553170	2	133,460,	0,4889,
#Partially deleted in new
chr15	75384007	75389821	chr15:75384007-75389821	0	-	75384007	75384007	8553170	2	430,170,	0,5644,
#Partially deleted in new
chr15	75388266	75388828	chr15:75388266-75388828	7	+	75388266	75388266	16724991	1	562,	0,
#Partially deleted in new
chr15	75412989	75455842	chr15:75412989-75455842	0	-	75412989	75430375	789624	5	56,107,177,222,55,	0,1215,9657,17197,42798,
#Partially deleted in new
chr15	75414251	75455026	chr15:75414251-75455026	0	-	75414251	75430375	789624	4	60,177,222,131,	0,8395,15935,40644,
#Partially deleted in new
chr15	75415248	75416020	chr15:75415248-75416020	7	+	75415248	75415248	16724991	2	322,144,	0,628,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	75419209	75451664	chr15:75419209-75451664	1	-	75422541	75430375	789624	3	3614,222,242,	0,10977,32213,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	75422642	75455840	chr15:75422642-75455840	0	-	75422642	75430375	789624	4	181,222,98,53,	0,7544,13703,33145,
#Partially deleted in new
chr15	75422691	75455815	chr15:75422691-75455815	0	-	75422691	75430375	789624	4	132,222,167,28,	0,7495,23537,33096,
#Partially deleted in new
chr15	75430068	75451537	chr15:75430068-75451537	0	-	75430068	75430068	8553170	2	340,115,	0,21354,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	75430320	75451746	chr15:75430320-75451746	0	-	75430320	75430375	789624	3	88,98,324,	0,6025,21102,
#Deleted in new
chr15	75452963	75453947	chr15:75452963-75453947	3	-	75452963	75452963	8553170	1	984,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr15	75463250	75579289	chr15:75463250-75579289	3	-	75468768	75578776	0	13	5733,208,151,79,67,94,329,111,106,125,90,144,576,	0,6541,7429,10438,16597,26957,42424,45666,54008,59870,60958,63867,115463,
#Partially deleted in new
chr15	75467126	75579289	chr15:75467126-75579289	1	-	75468768	75578746	789624	14	1857,208,151,79,67,94,329,111,106,125,90,144,39,462,	0,2665,3553,6562,12721,23081,38548,41790,50132,55994,57082,59991,111587,111701,
#Partially deleted in new
chr15	75468860	75470909	chr15:75468860-75470909	0	-	75468860	75468860	8553170	3	123,208,230,	0,931,1819,
#Partially deleted in new
chr15	75469809	75479916	chr15:75469809-75479916	0	-	75469809	75469809	8553170	3	190,79,69,	0,3879,10038,
#Partially deleted in new
chr15	75480660	75480836	chr15:75480660-75480836	7	+	75480660	75480660	16724991	1	176,	0,
#Partially deleted in new
chr15	75487287	75505816	chr15:75487287-75505816	0	-	75487287	75487287	8553170	3	490,94,142,	0,2920,18387,
#Partially deleted in new
chr15	75512769	75513040	chr15:75512769-75513040	7	-	75512769	75512769	16724991	1	271,	0,
#Partially deleted in new
chr15	75513190	75524274	chr15:75513190-75524274	0	-	75513210	75524274	789624	4	248,106,125,66,	0,4068,9930,11018,
#Partially deleted in new
chr15	75527149	75601205	chr15:75527149-75601205	0	-	75527149	75527149	8553170	3	112,403,68,	0,71129,73988,
#Partially deleted in new
chr15	75527178	75601184	chr15:75527178-75601184	0	-	75527178	75527178	8553170	4	83,141,403,47,	0,70161,71100,73959,
#Partially deleted in new
chr15	75527178	75601186	chr15:75527178-75601186	0	-	75527178	75527178	8553170	4	83,117,403,49,	0,43051,71100,73959,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	75527178	75601186	chr15:75527178-75601186	3	-	75527178	75527178	8553170	4	83,403,254,49,	0,71100,73458,73959,
#Partially deleted in new
chr15	75598082	75625815	chr15:75598082-75625815	3	-	75598357	75621051	0	9	599,81,78,98,94,105,145,163,150,	0,3055,7067,9133,11475,11807,19325,22811,27583,
#Partially deleted in new
chr15	75598082	75625794	chr15:75598082-75625794	1	-	75598357	75621051	0	10	599,81,78,98,94,105,145,163,149,129,	0,3055,7067,9133,11475,11807,19325,22811,24259,27583,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	75598088	75625688	chr15:75598088-75625688	1	-	75598357	75621051	0	10	593,81,78,98,94,105,145,163,221,353,	0,3049,7061,9127,11469,11801,19319,22805,26626,27247,
#Partially deleted in new
chr15	75598121	75625693	chr15:75598121-75625693	1	-	75598357	75621051	0	9	560,81,78,98,94,105,145,163,358,	0,3016,7028,9094,11436,11768,19286,22772,27214,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	75598507	75605364	chr15:75598507-75605364	0	-	75598507	75598507	8553170	3	174,81,215,	0,2630,6642,
#Partially deleted in new
chr15	75600790	75617524	chr15:75600790-75617524	0	-	75601107	75617524	789624	6	428,78,98,94,105,117,	0,4359,6425,8767,9099,16617,
#Partially deleted in new
chr15	75605198	75626159	chr15:75605198-75626159	0	-	75605198	75621051	789624	7	29,98,94,105,145,163,389,	0,2017,4359,4691,12209,15695,20572,
#Partially deleted in new
chr15	75609889	75626469	chr15:75609889-75626469	0	-	75609889	75621051	789624	4	105,145,163,231,	0,7518,11004,16349,
#Partially deleted in new
chr15	75617408	75625638	chr15:75617408-75625638	0	-	75617408	75621051	789624	4	144,163,149,303,	0,3485,4933,7927,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	75617519	75625179	chr15:75617519-75625179	0	-	75617519	75621051	789624	3	33,163,465,	0,3374,7195,
#Partially deleted in new
chr15	75621045	75625663	chr15:75621045-75625663	0	-	75621045	75621051	8553170	3	11,67,328,	0,1296,4290,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	75624792	75625690	chr15:75624792-75625690	3	+	75624792	75624792	8553170	2	406,154,	0,744,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	75636138	75639239	chr15:75636138-75639239	3	+	75636138	75636138	8553170	3	374,3,195,	0,1756,2906,
#Partially deleted in new
chr15	75639084	75648706	chr15:75639084-75648706	3	-	75639613	75640168	0	2	1184,844,	0,8778,
#Partially deleted in new
chr15	75639086	75640323	chr15:75639086-75640323	1	-	75639613	75640168	0	1	1237,	0,
#Partially deleted in new
chr15	75639759	75640976	chr15:75639759-75640976	3	+	75639759	75639759	8553170	1	1217,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	75641041	75648251	chr15:75641041-75648251	0	-	75641041	75641041	8553170	3	177,305,75,	0,5911,7135,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	75645019	75645442	chr15:75645019-75645442	3	+	75645019	75645019	8553170	1	423,	0,
#Partially deleted in new
chr15	75647905	75662301	chr15:75647905-75662301	3	+	75649102	75657215	0	2	2668,5340,	0,9056,
#Partially deleted in new
chr15	75649755	75658630	chr15:75649755-75658630	0	+	75649755	75657215	789624	3	553,43,1669,	0,775,7206,
#Partially deleted in new
chr15	75674321	75712848	chr15:75674321-75712848	3	-	75675549	75712755	789624	10	3063,184,167,135,199,177,483,3537,164,181,	0,3381,7971,8285,8521,10414,10897,12954,18748,38346,
#Deleted in new
chr15	75676226	75677162	chr15:75676226-75677162	3	+	75676226	75676226	8553170	2	510,53,	0,883,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	75678547	75680752	chr15:75678547-75680752	3	+	75678547	75678547	8553170	1	2205,	0,
#Partially deleted in new
chr15	75723976	75727688	chr15:75723976-75727688	3	+	75724199	75727540	789624	4	341,111,114,630,	0,1131,2081,3082,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	75727669	75738623	chr15:75727669-75738623	3	-	75727669	75727669	8553170	3	2765,186,237,	0,4297,10717,
#Deleted in new
chr15	75746768	75747263	chr15:75746768-75747263	7	+	75746768	75746768	16724991	1	495,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	75758539	75760136	chr15:75758539-75760136	0	+	75758539	75758539	8553170	1	1597,	0,
#Partially deleted in new
chr15	75758565	75763321	chr15:75758565-75763321	1	+	75758565	75758565	8553170	4	62,107,86,339,	0,3457,3776,4417,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	75759500	75762405	chr15:75759500-75762405	3	-	75759500	75759500	8553170	1	2905,	0,
#Deleted in new
chr15	75762214	75762315	chr15:75762214-75762315	3	-	75762214	75762214	5263520	1	101,	0,
#Partially deleted in new
chr15	75775552	75783203	chr15:75775552-75783203	5	+	75775552	75775552	16724991	10	125,120,81,39,51,82,107,87,108,384,	0,1798,3840,4780,5083,5234,5412,6533,6727,7267,
#Partially deleted in new
chr15	75775593	75786898	chr15:75775593-75786898	7	+	75775593	75775593	16724991	18	84,120,81,39,51,82,107,87,108,80,534,64,70,92,101,106,135,130,	0,1757,3799,4739,5042,5193,5371,6492,6686,6986,7226,8032,9405,9905,10559,10747,10935,11175,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	75785133	75785354	chr15:75785133-75785354	3	+	75785133	75785133	8553170	1	221,	0,
#Partially deleted in new
chr15	75791469	75792683	chr15:75791469-75792683	7	-	75791469	75791469	16724991	2	289,185,	0,1029,
#Partially deleted in new
chr15	75843284	75901078	chr15:75843284-75901078	3	+	75843666	75899458	0	13	562,102,105,60,141,85,61,91,59,49,96,67,1652,	0,11101,16593,25666,30143,32902,34676,35813,40081,47150,47634,53710,56142,
#Partially deleted in new
chr15	75843306	75901044	chr15:75843306-75901044	1	+	75843666	75899458	0	12	540,102,60,141,85,61,91,59,49,96,67,1618,	0,11079,25644,30121,32880,34654,35791,40059,47128,47612,53688,56120,
#Partially deleted in new
chr15	75843567	75899494	chr15:75843567-75899494	0	+	75843666	75897010	789624	5	279,102,59,67,68,	0,10818,39798,53427,55859,
#Partially deleted in new
chr15	75844043	75899650	chr15:75844043-75899650	1	+	75844353	75899458	0	13	442,102,105,60,141,85,61,91,59,49,96,67,224,	0,10342,15834,24907,29384,32143,33917,35054,39322,46391,46875,52951,55383,
#Partially deleted in new
chr15	75844146	75859885	chr15:75844146-75859885	0	+	75844146	75844146	8553170	3	443,102,8,	0,10239,15731,
#Partially deleted in new
chr15	75859939	75901044	chr15:75859939-75901044	0	+	75859939	75899487	789624	8	43,60,141,85,61,91,59,1618,	0,9011,13488,16247,18021,19158,23426,39487,
#Partially deleted in new
chr15	75868950	75899577	chr15:75868950-75899577	0	+	75868950	75897010	789624	5	60,141,59,67,151,	0,4477,14415,28044,30476,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	75878185	75897062	chr15:75878185-75897062	0	+	75878185	75878185	8553170	6	175,91,59,49,96,68,	0,912,5180,12249,12733,18809,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	75895039	75895302	chr15:75895039-75895302	3	+	75895039	75895039	8553170	1	263,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	75903858	75942510	chr15:75903858-75942510	3	+	75903963	75933102	789624	7	245,139,88,96,165,166,9826,	0,632,9344,10251,13371,26025,28826,
#Partially deleted in new
chr15	75903875	75930847	chr15:75903875-75930847	0	+	75903963	75917232	789624	4	228,139,165,964,	0,615,13354,26008,
#Partially deleted in new
chr15	75903877	75930655	chr15:75903877-75930655	1	+	75903963	75930086	789624	6	226,139,88,96,165,772,	0,613,9325,10232,13352,26006,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	75903877	75934107	chr15:75903877-75934107	0	+	75903963	75913203	789624	6	226,88,96,165,166,1423,	0,9325,10232,13352,26006,28807,
#Partially deleted in new
chr15	75903981	75932798	chr15:75903981-75932798	0	+	75903981	75932798	789624	6	122,139,88,96,166,114,	0,509,9221,10128,25902,28703,
#Partially deleted in new
chr15	75904124	75930049	chr15:75904124-75930049	0	+	75913235	75930049	789624	6	128,139,88,96,165,166,	0,366,9078,9985,13105,25759,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	75913267	75934290	chr15:75913267-75934290	0	+	75913267	75933751	789624	6	23,96,165,166,90,182,	0,842,3962,16616,20474,20841,
#Deleted in new
chr15	75932799	75933826	chr15:75932799-75933826	0	+	75932799	75933747	789624	2	231,85,	0,942,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	75935968	75942772	chr15:75935968-75942772	0	-	75935968	75935968	8553170	2	342,135,	0,6669,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	75935968	75945845	chr15:75935968-75945845	0	-	75935968	75935968	8553170	3	342,83,88,	0,7603,9789,
#Partially deleted in new
chr15	75936263	76057017	chr15:75936263-76057017	0	-	75943637	76011230	789624	7	47,83,80,147,94,66,64,	0,7308,19668,25564,72936,74957,120690,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	75940935	76012422	chr15:75940935-76012422	0	-	75971244	76011230	789624	8	2719,80,147,96,83,94,66,121,	0,14996,20892,28193,30230,68264,70285,71366,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	75941972	76012221	chr15:75941972-76012221	0	-	75969217	76011230	789624	7	1682,80,147,96,94,66,203,	0,13959,19855,27156,67227,69248,70046,
#Partially deleted in new
chr15	75943008	76012444	chr15:75943008-76012444	3	-	75943637	76011230	789624	6	646,80,147,94,66,126,	0,12923,18819,66191,68212,69310,
#Partially deleted in new
chr15	75943043	76011287	chr15:75943043-76011287	0	-	75969217	76011230	789624	7	440,83,80,147,96,94,67,	0,528,12888,18784,26085,66156,68177,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	75943165	76059728	chr15:75943165-76059728	0	-	75971244	76011230	789624	12	489,80,119,147,96,83,94,66,48,111,46,74,	0,12766,15856,18662,25963,28000,66034,68055,92778,108901,109772,116489,
#Partially deleted in new
chr15	75943233	76012433	chr15:75943233-76012433	0	-	75969217	76011230	789624	7	421,80,147,96,94,66,132,	0,12698,18594,25895,65966,67987,69068,
#Deleted in new
chr15	75950463	75951144	chr15:75950463-75951144	7	-	75950463	75950463	16724991	1	681,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	75955931	76012422	chr15:75955931-76012422	0	-	75959118	76011230	789624	6	80,119,147,94,66,104,	0,3090,5896,53268,55289,56387,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	75955931	76059795	chr15:75955931-76059795	0	-	75955931	76011230	789624	9	80,147,94,66,48,111,46,66,141,	0,5896,53268,55289,80012,96135,97006,101022,103723,
#Partially deleted in new
chr15	75955931	76012394	chr15:75955931-76012394	0	-	75969217	76011230	789624	6	80,147,96,94,66,76,	0,5896,13197,53268,55289,56387,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	75959073	76012077	chr15:75959073-76012077	0	-	75969217	76011230	789624	6	67,147,96,94,66,59,	0,2754,10055,50126,52147,52945,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	75961929	76059733	chr15:75961929-76059733	0	-	75969217	76011230	789624	9	45,96,94,66,48,111,46,131,79,	0,7199,47270,49291,74014,90137,91008,91309,97725,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	76052097	76057254	chr15:76052097-76057254	0	-	76052097	76052097	8553170	4	80,46,131,301,	0,840,1141,4856,
#Partially deleted in new
chr15	76059836	76204963	chr15:76059836-76204963	3	+	76134263	76204315	789624	11	180,134,189,155,74,57,139,116,190,63,1223,	0,74331,77870,96767,100258,109979,111156,115722,132131,142365,143904,
#Partially deleted in new
chr15	76059957	76204962	chr15:76059957-76204962	0	+	76134263	76160124	789624	11	59,134,189,49,74,57,139,116,190,63,1222,	0,74210,77749,96646,100137,109858,111035,115601,132010,142244,143783,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	76059984	76114203	chr15:76059984-76114203	0	+	76059984	76059984	8553170	4	32,151,91,1658,	0,49048,52033,52561,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	76059984	76229121	chr15:76059984-76229121	0	+	76134263	76171000	789624	11	32,134,189,74,57,139,116,190,63,422,346,	0,74183,77722,100110,109831,111008,115574,131983,142217,143756,168791,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	76174890	76181486	chr15:76174890-76181486	3	-	76174890	76174890	789624	3	1580,239,535,	0,3655,6061,
#Partially deleted in new
chr15	76191468	76204962	chr15:76191468-76204962	0	+	76191468	76191468	8553170	3	689,63,1222,	0,10733,12272,
#Partially deleted in new
chr15	76215354	76311469	chr15:76215354-76311469	3	-	76216558	76311388	0	12	1243,81,66,83,69,102,111,100,83,82,147,120,	0,10494,15978,59057,68402,70282,71016,72491,77076,77264,80236,95995,
#Partially deleted in new
chr15	76216083	76311404	chr15:76216083-76311404	1	-	76216558	76311388	0	11	514,81,66,83,69,102,111,100,83,82,55,	0,9765,15249,58328,67673,69553,70287,71762,76347,76535,95266,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	76216129	76228249	chr15:76216129-76228249	0	-	76216129	76216129	8553170	3	468,81,537,	0,9719,11583,
#Partially deleted in new
chr15	76216249	76311448	chr15:76216249-76311448	0	-	76292504	76311388	789624	11	348,81,66,83,69,102,111,100,83,147,99,	0,9599,15083,58162,67507,69387,70121,71596,76181,79341,95100,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	76216320	76231398	chr15:76216320-76231398	0	-	76227822	76231398	789624	4	277,81,185,66,	0,9528,11392,15012,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	76216434	76226335	chr15:76216434-76226335	0	-	76216434	76216434	8553170	2	163,487,	0,9414,
#Partially deleted in new
chr15	76216467	76311466	chr15:76216467-76311466	1	-	76216558	76274447	789624	10	130,81,66,83,69,102,111,100,83,117,	0,9381,14865,57944,67289,69169,69903,71378,75963,94882,
#Partially deleted in new
chr15	76216482	76311414	chr15:76216482-76311414	1	-	76216558	76311388	789624	9	115,81,66,83,69,102,111,100,65,	0,9366,14850,57929,67274,69154,69888,71363,94867,
#Partially deleted in new
chr15	76216558	76292491	chr15:76216558-76292491	0	-	76217587	76292491	789624	10	39,92,81,66,83,69,102,111,100,61,	0,1027,9290,14774,57853,67198,69078,69812,71287,75872,
#Partially deleted in new
chr15	76216582	76311396	chr15:76216582-76311396	0	-	76216582	76311388	789624	11	15,81,66,83,102,111,100,83,82,147,47,	0,9266,14750,57829,69054,69788,71263,75848,76036,79008,94767,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	76225904	76311414	chr15:76225904-76311414	0	-	76227900	76274447	789624	10	25,206,66,83,69,102,111,100,83,65,	0,1808,5428,48507,57852,59732,60466,61941,66526,85445,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	76230047	76230390	chr15:76230047-76230390	3	-	76230047	76230047	8553170	1	343,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	76230503	76311412	chr15:76230503-76311412	0	-	76230503	76230503	8553170	10	895,83,69,102,111,100,83,82,147,63,	0,43908,53253,55133,55867,57342,61927,62115,65087,80846,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	76231377	76311472	chr15:76231377-76311472	0	-	76309965	76311388	789624	11	21,83,69,102,111,100,83,82,147,133,123,	0,43034,52379,54259,54993,56468,61053,61241,64213,78554,79972,
#Partially deleted in new
chr15	76245211	76286491	chr15:76245211-76286491	0	-	76245211	76245211	8553170	5	37,83,69,102,121,	0,29200,38545,40425,41159,
#Deleted in new
chr15	76258985	76261690	chr15:76258985-76261690	7	-	76258985	76258985	16724991	1	2705,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	76274132	76283841	chr15:76274132-76283841	0	-	76274132	76274132	8553170	2	362,85,	0,9624,
#Partially deleted in new
chr15	76274175	76292622	chr15:76274175-76292622	0	-	76274175	76274175	8553170	6	319,69,102,111,100,192,	0,9581,11461,12195,13670,18255,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	76286405	76311443	chr15:76286405-76311443	0	-	76309965	76311388	789624	6	76,100,83,147,133,94,	0,1440,6025,9185,23526,24944,
#Partially deleted in new
chr15	76287767	76311402	chr15:76287767-76311402	0	-	76287767	76287767	8553170	4	178,83,147,53,	0,4663,7823,23582,
#Deleted in new
chr15	76336723	76342476	chr15:76336723-76342476	3	+	76336883	76341835	789624	6	218,190,263,284,168,758,	0,1054,1528,3552,4410,4995,
#Deleted in new
chr15	76336807	76342388	chr15:76336807-76342388	0	+	76336883	76341189	789624	5	134,190,284,168,670,	0,970,3468,4326,4911,
#Deleted in new
chr15	76337437	76338514	chr15:76337437-76338514	0	+	76337437	76337437	8553170	2	530,263,	0,814,
#Deleted in new
chr15	76339608	76342063	chr15:76339608-76342063	3	-	76339608	76339608	8553170	3	356,230,172,	0,654,2283,
#Deleted in new
chr15	76343641	76344365	chr15:76343641-76344365	3	+	76343641	76343641	8553170	1	724,	0,
#Partially deleted in new
chr15	76347903	76905335	chr15:76347903-76905335	3	-	76348632	76883817	789624	32	833,52,192,150,238,156,233,124,116,127,66,137,108,153,82,143,156,141,112,118,76,171,213,263,161,117,101,198,71,118,65,37,	0,3333,6045,28258,33474,56620,86174,123308,156955,226254,273860,317749,353854,354946,357999,380691,385325,405904,417057,417433,417659,419014,423838,426951,447376,452344,456629,493830,509905,514512,535908,557395,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr15	76348184	76861944	chr15:76348184-76861944	1	-	76348632	76793266	789624	32	552,52,192,150,238,156,233,124,116,127,66,137,108,153,82,143,156,141,112,118,76,171,213,263,159,161,117,101,198,67,71,100,	0,3052,5764,27977,33193,56339,85893,123027,156674,225973,273579,317468,353573,354665,357718,380410,385044,405623,416776,417152,417378,418733,423557,426670,445048,447095,452063,456348,493549,507625,509624,513660,
#Partially deleted in new
chr15	76348187	76883876	chr15:76348187-76883876	1	-	76348632	76883817	789624	31	549,52,192,150,238,156,233,124,116,127,66,137,108,153,82,143,156,141,112,118,76,171,213,263,161,117,101,198,71,118,65,	0,3049,5761,27974,33190,56336,85890,123024,156671,225970,273576,317465,353570,354662,357715,380407,385041,405620,416773,417149,417375,418730,423554,426667,447092,452060,456345,493546,509621,514228,535624,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	76348196	76354651	chr15:76348196-76354651	0	-	76348196	76348196	8553170	2	3092,703,	0,5752,
#Partially deleted in new
chr15	76348452	76354547	chr15:76348452-76354547	0	-	76348452	76348452	8553170	4	284,52,192,24,	0,2784,5496,6071,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr15	76379708	76905403	chr15:76379708-76905403	0	-	76379708	76379708	8553170	27	1907,156,233,124,116,127,66,137,108,153,82,143,156,141,112,118,76,171,231,263,161,117,101,198,71,65,105,	0,24815,54369,91503,125150,194449,242055,285944,322049,323141,326194,348886,353520,374099,385252,385628,385854,387209,392015,395146,415571,420539,424824,462025,478100,504103,525590,
#Partially deleted in new
chr15	76381563	76385251	chr15:76381563-76385251	0	-	76381563	76381563	8553170	2	52,79,	0,3609,
#Partially deleted in new
chr15	76434132	76498597	chr15:76434132-76498597	0	-	76434132	76434132	8553170	3	178,124,256,	0,37079,64209,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	76434180	76576951	chr15:76434180-76576951	0	-	76434180	76434180	8553170	5	130,124,116,127,93,	0,37031,70678,139977,142678,
#Partially deleted in new
chr15	76434259	76665658	chr15:76434259-76665658	0	-	76567306	76665658	789624	7	51,124,116,136,127,66,6,	0,36952,70599,133010,139898,187504,231393,
#Partially deleted in new
chr15	76471095	76621829	chr15:76471095-76621829	0	-	76471095	76471095	8553170	4	240,116,127,66,	0,33763,103062,150668,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	76471261	76576985	chr15:76471261-76576985	0	-	76471261	76471261	8553170	5	74,116,136,127,127,	0,33597,96008,102896,105597,
#Deleted in new
chr15	76472098	76472365	chr15:76472098-76472365	7	+	76472098	76472098	16724991	1	267,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	76586646	76586691	chr15:76586646-76586691	3	+	76586646	76586646	5263520	1	45,	0,
#Partially deleted in new
chr15	76702965	76905444	chr15:76702965-76905444	0	-	76702965	76883817	789624	19	37,82,143,156,141,112,118,76,171,231,263,161,117,101,198,71,118,65,146,	0,2937,25629,30263,50842,61995,62371,62597,63952,68758,71889,92314,97282,101567,138768,154843,159450,180846,202333,
#Partially deleted in new
chr15	76702965	76905337	chr15:76702965-76905337	0	-	76855843	76883817	789624	21	37,82,143,156,141,112,118,76,171,213,263,161,117,101,198,67,71,118,65,178,39,	0,2937,25629,30263,50842,61995,62371,62597,63952,68776,71889,92314,97282,101567,138768,152844,154843,159450,180846,201648,202333,
#Partially deleted in new
chr15	76705925	76905279	chr15:76705925-76905279	0	-	76705925	76883817	789624	18	59,143,156,141,112,118,76,171,231,263,161,117,101,198,71,118,65,87,	0,22669,27303,47882,59035,59411,59637,60992,65798,68929,89354,94322,98607,135808,151883,156490,177886,199267,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	76736640	76736980	chr15:76736640-76736980	3	+	76736640	76736640	8553170	1	340,	0,
#Partially deleted in new
chr15	76766979	76775064	chr15:76766979-76775064	0	-	76766979	76775064	789624	4	109,213,42,210,	0,4762,7388,7875,
#Partially deleted in new
chr15	76771812	76800267	chr15:76771812-76800267	0	-	76795271	76800267	789624	4	142,263,200,20,	0,3042,23428,28435,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	76771882	76797608	chr15:76771882-76797608	0	-	76771882	76771882	8553170	4	72,263,161,69,	0,2972,23397,25657,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	76774931	76797543	chr15:76774931-76797543	0	-	76774931	76774931	8553170	3	186,161,324,	0,20348,22288,
#Partially deleted in new
chr15	76795303	76905351	chr15:76795303-76905351	0	-	76795303	76804624	789624	6	137,117,101,71,65,53,	0,4944,9229,62505,88508,109995,
#Partially deleted in new
chr15	76795391	76905349	chr15:76795391-76905349	0	-	76795391	76883817	789624	7	49,117,101,71,118,65,51,	0,4856,9141,62417,67024,88420,109907,
#Partially deleted in new
chr15	76800274	76905349	chr15:76800274-76905349	0	-	76800274	76804624	789624	6	90,101,198,71,65,51,	0,4258,41459,57534,83537,105024,
#Partially deleted in new
chr15	76841791	76905367	chr15:76841791-76905367	0	-	76841791	76883817	789624	6	140,71,118,65,178,69,	0,16017,20624,42020,62822,63507,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	76931618	76954392	chr15:76931618-76954392	3	+	76931841	76949222	789624	7	367,106,197,114,97,143,5323,	0,742,3907,12139,15802,16791,17451,
#Partially deleted in new
chr15	76931737	76949860	chr15:76931737-76949860	1	+	76931841	76949222	789624	8	248,106,197,54,114,97,143,791,	0,623,3788,9899,12020,15683,16672,17332,
#Partially deleted in new
chr15	76931754	76949850	chr15:76931754-76949850	1	+	76931841	76949222	789624	5	231,114,97,143,781,	0,12003,15666,16655,17315,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	76931870	76947489	chr15:76931870-76947489	0	+	76931870	76938773	789624	6	115,106,197,90,114,69,	0,490,3655,6855,11887,15550,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	76941400	76948885	chr15:76941400-76948885	0	+	76941400	76941400	8553170	2	2471,1465,	0,6020,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	76943491	76948615	chr15:76943491-76948615	0	+	76943491	76943491	8553170	3	380,97,206,	0,3929,4918,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	76976914	76977210	chr15:76976914-76977210	3	-	76976914	76976914	8553170	1	296,	0,
#Partially deleted in new
chr15	76979244	76980451	chr15:76979244-76980451	7	-	76979244	76979244	16724991	1	1207,	0,
#Partially deleted in new
chr15	76993358	77025582	chr15:76993358-77025582	0	+	76994789	77025582	789624	7	42,113,205,101,75,35,85,	0,1344,2046,24789,25098,31925,32139,
#Partially deleted in new
chr15	76994679	77037301	chr15:76994679-77037301	0	+	76994789	77035841	789624	16	136,205,101,75,35,107,63,99,46,80,99,131,91,56,134,257,	0,725,23468,23777,30604,30818,33172,33874,34849,35822,36500,37618,38182,40828,41122,42365,
#Partially deleted in new
chr15	76995084	77037332	chr15:76995084-77037332	3	+	76995573	77037176	0	15	525,101,75,35,107,63,99,46,80,99,97,91,56,134,288,	0,23063,23372,30199,30413,32767,33469,34444,35417,36095,37213,37777,40423,40717,41960,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr15	76995121	77037216	chr15:76995121-77037216	0	+	76995573	77007927	789624	16	488,219,101,75,35,107,63,99,46,80,99,97,91,56,134,172,	0,12725,23026,23335,30162,30376,32730,33432,34407,35380,36058,37176,37740,40386,40680,41923,
#Partially deleted in new
chr15	76995125	77024427	chr15:76995125-77024427	0	+	76995125	76995125	8553170	4	484,101,75,415,	0,23022,23331,28887,
#Partially deleted in new
chr15	76995130	77037331	chr15:76995130-77037331	1	+	76995573	77037176	789624	15	479,101,75,35,107,63,99,46,80,99,97,91,56,125,287,	0,23017,23326,30153,30367,32721,33423,34398,35371,36049,37167,37731,40377,40680,41914,
#Partially deleted in new
chr15	76995171	77031761	chr15:76995171-77031761	0	+	76995573	77027856	789624	10	438,101,75,35,107,115,99,46,80,582,	0,22976,23285,30112,30326,32628,33382,34357,35330,36008,
#Partially deleted in new
chr15	76995361	77025318	chr15:76995361-77025318	0	+	76995361	76995361	8553170	5	248,101,75,98,35,	0,22786,23095,28208,29922,
#Partially deleted in new
chr15	76995384	77032863	chr15:76995384-77032863	0	+	76995384	76995384	8553170	11	225,101,75,35,107,115,99,46,80,99,566,	0,22763,23072,29899,30113,32415,33169,34144,35117,35795,36913,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	76995411	77029556	chr15:76995411-77029556	0	+	77018213	77027799	789624	9	198,154,101,75,35,107,169,99,28,	0,4049,22736,23045,29872,30086,32334,33142,34117,
#Partially deleted in new
chr15	76995418	77030574	chr15:76995418-77030574	0	+	76995573	77030574	789624	9	191,101,75,35,107,63,90,46,73,	0,22729,23038,29865,30079,32433,33135,34110,35083,
#Partially deleted in new
chr15	76995573	77037331	chr15:76995573-77037331	1	+	76995573	77037176	0	14	36,101,75,35,107,63,99,46,80,99,131,56,134,287,	0,22574,22883,29710,29924,32278,32980,33955,34928,35606,36724,39934,40228,41471,
#Partially deleted in new
chr15	77015810	77028598	chr15:77015810-77028598	0	+	77015986	77028598	789624	7	185,101,75,35,107,63,45,	0,2337,2646,9473,9687,12041,12743,
#Partially deleted in new
chr15	77018457	77032393	chr15:77018457-77032393	0	+	77018457	77032393	789624	10	74,35,107,57,63,99,46,80,99,96,	0,6826,7040,7658,9394,10096,11071,12044,12722,13840,
#Partially deleted in new
chr15	77027724	77031326	chr15:77027724-77031326	0	+	77027724	77027724	8553170	5	190,99,46,80,147,	0,829,1804,2777,3455,
#Partially deleted in new
chr15	77028342	77037313	chr15:77028342-77037313	0	+	77028342	77028342	8553170	10	81,99,46,80,99,97,91,56,134,269,	0,211,1186,2159,2837,3955,4519,7165,7459,8702,
#Deleted in new
chr15	77032316	77037332	chr15:77032316-77037332	0	+	77032316	77037176	789624	4	78,56,134,288,	0,3191,3485,4728,
#Deleted in new
chr15	77035693	77037332	chr15:77035693-77037332	0	+	77035693	77035693	8553170	2	242,288,	0,1351,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	77041403	77071228	chr15:77041403-77071228	3	-	77046834	77070954	789624	7	5524,84,153,102,75,192,337,	0,10981,11373,12774,14385,14660,29488,
#Partially deleted in new
chr15	77043679	77045160	chr15:77043679-77045160	3	+	77043679	77043679	8553170	2	158,106,	0,1375,
#Partially deleted in new
chr15	77046029	77071109	chr15:77046029-77071109	1	-	77046834	77070954	789624	6	898,84,153,102,192,218,	0,6355,6747,8148,10034,24862,
#Partially deleted in new
chr15	77046029	77071109	chr15:77046029-77071109	1	-	77046834	77070954	789624	6	898,84,153,102,75,218,	0,6355,6747,8148,9759,24862,
#Partially deleted in new
chr15	77046029	77055934	chr15:77046029-77055934	0	-	77046029	77046029	8553170	4	898,84,153,1757,	0,6355,6747,8148,
#Partially deleted in new
chr15	77046059	77071122	chr15:77046059-77071122	1	-	77046834	77052429	789624	7	868,84,153,102,75,192,118,	0,6325,6717,8118,9729,10004,24945,
#Partially deleted in new
chr15	77046083	77071034	chr15:77046083-77071034	1	-	77046834	77070954	789624	5	844,84,153,102,143,	0,6301,6693,8094,24808,
#Partially deleted in new
chr15	77046331	77083984	chr15:77046331-77083984	1	-	77046834	77052429	789624	7	596,84,153,102,75,192,138,	0,6053,6445,7846,9457,9732,37515,
#Partially deleted in new
chr15	77054180	77071109	chr15:77054180-77071109	0	-	77054180	77054180	8553170	4	99,41,192,218,	0,1608,1883,16711,
#Partially deleted in new
chr15	77055835	77071109	chr15:77055835-77071109	0	-	77055835	77055835	8553170	2	420,218,	0,15056,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	77063396	77064910	chr15:77063396-77064910	3	-	77063396	77063396	8553170	1	1514,	0,
#Deleted in new
chr15	77067653	77068325	chr15:77067653-77068325	3	-	77067653	77067653	8553170	1	672,	0,
#Deleted in new
chr15	77069866	77071092	chr15:77069866-77071092	0	-	77069866	77069866	8553170	2	192,201,	0,1025,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	77100655	77420144	chr15:77100655-77420144	3	-	77114155	77181926	0	7	14664,746,194,3251,160,63,139,	0,32349,57847,78134,151711,264507,319350,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	77108163	77252531	chr15:77108163-77252531	1	-	77114155	77181926	0	5	7156,746,194,3251,165,	0,24841,50339,70626,144203,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	77155199	77179808	chr15:77155199-77179808	0	-	77155199	77155199	8553170	2	3497,1019,	0,23590,
#Partially deleted in new
chr15	77177818	77420122	chr15:77177818-77420122	1	-	77178776	77181926	789624	5	4222,160,82,63,117,	0,74548,108604,187344,242187,
#Deleted in new
chr15	77177855	77179147	chr15:77177855-77179147	0	-	77177855	77177855	8553170	2	168,358,	0,934,
#Partially deleted in new
chr15	77179957	77420100	chr15:77179957-77420100	0	-	77179957	77181926	789624	4	2083,82,63,95,	0,106465,185205,240048,
#Partially deleted in new
chr15	77181746	77255552	chr15:77181746-77255552	0	-	77181746	77181926	789624	3	294,160,104,	0,70620,73702,
#Partially deleted in new
chr15	77204577	77205100	chr15:77204577-77205100	7	+	77204577	77204577	16724991	2	57,188,	0,335,
#Deleted in new
chr15	77278464	77278774	chr15:77278464-77278774	7	+	77278464	77278464	16724991	1	310,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	77283761	77285100	chr15:77283761-77285100	0	-	77283761	77283761	8553170	2	269,143,	0,1196,
#Partially deleted in new
chr15	77420411	77467158	chr15:77420411-77467158	0	+	77458407	77467158	789624	4	326,93,148,64,	0,37992,43828,46683,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	77420650	77485607	chr15:77420650-77485607	3	+	77458407	77479315	789624	10	354,93,148,213,133,32,76,216,143,2638,	0,37753,43589,46444,50259,51132,56904,57644,58528,62319,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	77420673	77485603	chr15:77420673-77485603	1	+	77458407	77479315	789624	11	331,93,93,148,213,133,32,76,216,143,2634,	0,27045,37730,43566,46421,50236,51109,56881,57621,58505,62296,
#Partially deleted in new
chr15	77420721	77467284	chr15:77420721-77467284	0	+	77467196	77467284	789624	4	113,43,148,190,	0,37732,43518,46373,
#Partially deleted in new
chr15	77420901	77471003	chr15:77420901-77471003	0	+	77458407	77467200	789624	5	103,93,148,125,94,	0,37502,43338,46281,50008,
#Partially deleted in new
chr15	77420920	77467274	chr15:77420920-77467274	0	+	77467196	77467274	789624	4	84,155,148,92,	0,37483,43319,46262,
#Partially deleted in new
chr15	77420934	77464823	chr15:77420934-77464823	0	+	77420934	77420934	8553170	3	70,93,584,	0,37469,43305,
#Partially deleted in new
chr15	77421010	77470929	chr15:77421010-77470929	0	+	77458407	77470929	789624	5	84,93,148,213,20,	0,37393,43229,46084,49899,
#Partially deleted in new
chr15	77458216	77470946	chr15:77458216-77470946	0	+	77458407	77470946	789624	5	68,93,148,213,37,	0,187,6023,8878,12693,
#Partially deleted in new
chr15	77478122	77483419	chr15:77478122-77483419	0	+	77478122	77478122	8553170	3	388,143,450,	0,1056,4847,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	77478292	77479604	chr15:77478292-77479604	0	+	77478292	77479315	789624	2	218,426,	0,886,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	77482049	77485607	chr15:77482049-77485607	0	+	77482049	77482049	8553170	1	3558,	0,
#Deleted in new
chr15	77484274	77485606	chr15:77484274-77485606	3	-	77484274	77484274	8553170	1	1332,	0,
#Partially deleted in new
chr15	77525539	77534110	chr15:77525539-77534110	3	+	77525539	77525539	789624	2	806,3008,	0,5563,
#Partially deleted in new
chr15	77568969	77573037	chr15:77568969-77573037	1	+	77568969	77568969	8553170	3	207,195,473,	0,3281,3595,
#Partially deleted in new
chr15	77568969	77608888	chr15:77568969-77608888	3	+	77568969	77568969	8553170	4	207,195,175,349,	0,3281,3595,39570,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	77613026	77632490	chr15:77613026-77632490	1	-	77614043	77632315	0	2	2874,181,	0,19283,
#Partially deleted in new
chr15	77613669	77696148	chr15:77613669-77696148	1	-	77614043	77615888	0	4	2231,86,182,178,	0,63419,77050,82301,
#Partially deleted in new
chr15	77614943	77634353	chr15:77614943-77634353	0	-	77614943	77634296	789624	2	957,78,	0,19332,
#Partially deleted in new
chr15	77615352	77787014	chr15:77615352-77787014	2	-	77615352	77615888	789624	4	548,182,62,146,	0,75367,119639,171516,
#Partially deleted in new
chr15	77615512	77707507	chr15:77615512-77707507	0	-	77615512	77615888	789624	3	388,86,114,	0,61576,91881,
#Partially deleted in new
chr15	77615672	77819452	chr15:77615672-77819452	0	-	77615672	77615888	789624	4	228,86,115,182,	0,61416,180266,203598,
#Partially deleted in new
chr15	77615721	77696495	chr15:77615721-77696495	0	-	77615721	77615888	789624	4	179,86,182,105,	0,61367,74998,80669,
#Partially deleted in new
chr15	77615781	77720751	chr15:77615781-77720751	0	-	77615781	77615888	789624	4	119,86,182,135,	0,61307,74938,104835,
#Partially deleted in new
chr15	77615832	77820900	chr15:77615832-77820900	0	-	77615832	77615888	789624	6	68,86,182,62,115,58,	0,61256,74887,119159,180106,205010,
#Partially deleted in new
chr15	77615853	77820332	chr15:77615853-77820332	0	-	77615853	77615888	789624	6	47,86,182,62,115,75,	0,61235,74866,119138,180085,204404,
#Partially deleted in new
chr15	77615876	77820871	chr15:77615876-77820871	0	-	77615876	77615888	8553170	6	24,86,182,62,115,85,	0,61212,74843,119115,180062,204910,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	77641763	77649240	chr15:77641763-77649240	3	+	77641763	77641763	789624	3	194,124,1402,	0,4624,6075,
#Partially deleted in new
chr15	77646341	77652288	chr15:77646341-77652288	1	+	77646341	77646341	8553170	2	170,954,	0,4993,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	77646357	77648201	chr15:77646357-77648201	1	+	77646357	77646357	8553170	3	154,123,58,	0,1481,1786,
#Deleted in new
chr15	77660051	77668074	chr15:77660051-77668074	3	+	77660051	77660051	789624	3	132,127,404,	0,6908,7619,
#Partially deleted in new
chr15	77677106	77819528	chr15:77677106-77819528	0	-	77677106	77677106	8553170	5	68,182,62,115,258,	0,13613,57885,118832,142164,
#Partially deleted in new
chr15	77677108	77820854	chr15:77677108-77820854	0	-	77677108	77677108	8553170	5	66,182,62,115,76,	0,13611,57883,118830,143670,
#Partially deleted in new
chr15	77677155	77820224	chr15:77677155-77820224	0	-	77677155	77677155	8553170	5	19,182,62,115,191,	0,13564,57836,118783,142878,
#Deleted in new
chr15	77784609	77785070	chr15:77784609-77785070	3	-	77784609	77784609	8553170	1	461,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	77787192	77788575	chr15:77787192-77788575	3	+	77787192	77787192	8553170	2	55,687,	0,696,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	77788071	77788674	chr15:77788071-77788674	0	+	77788071	77788071	8553170	2	74,294,	0,309,
#Partially deleted in new
chr15	77894683	77904674	chr15:77894683-77904674	7	+	77894683	77894683	16724991	7	155,3509,454,178,199,135,171,	0,1419,6651,7429,9242,9542,9820,
#Partially deleted in new
chr15	77901660	77904361	chr15:77901660-77904361	4	+	77901660	77901660	16724991	4	144,178,199,136,	0,452,2265,2565,
#Deleted in new
chr15	77914216	77915926	chr15:77914216-77915926	5	-	77914216	77914216	16724991	4	1095,154,104,100,	0,1181,1423,1610,
#Deleted in new
chr15	77914724	77915801	chr15:77914724-77915801	4	-	77914724	77914724	16724991	3	587,154,162,	0,673,915,
#Partially deleted in new
chr15	77915183	77926825	chr15:77915183-77926825	7	-	77915183	77915183	16724991	18	128,154,104,103,92,76,69,551,88,108,87,107,82,45,44,81,120,84,	0,214,456,643,1310,1833,3236,3581,4540,4820,5036,6152,6355,6537,6845,7746,9752,11558,
#Partially deleted in new
chr15	77916521	77922019	chr15:77916521-77922019	3	+	77916521	77916521	8553170	2	111,242,	0,5256,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	77916717	77916982	chr15:77916717-77916982	3	-	77916717	77916717	8553170	1	265,	0,
#Partially deleted in new
chr15	77918419	77926846	chr15:77918419-77926846	5	-	77918419	77918419	16724991	12	69,551,88,108,87,107,82,51,44,81,120,105,	0,345,1304,1584,1800,2916,3119,3301,3609,4510,6516,8322,
#Deleted in new
chr15	77941441	77942747	chr15:77941441-77942747	5	-	77941441	77941441	16724991	5	81,120,40,66,73,	0,240,683,946,1233,
#Partially deleted in new
chr15	77941898	77944582	chr15:77941898-77944582	7	-	77941898	77941898	16724991	3	336,66,200,	0,489,2484,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	77954074	77963654	chr15:77954074-77963654	3	-	77954074	77954074	8553170	2	270,301,	0,9279,
#Partially deleted in new
chr15	77976041	77993057	chr15:77976041-77993057	7	+	77976041	77976041	16724991	15	146,86,146,174,247,245,142,127,213,1403,148,174,147,163,155,	0,748,1240,2797,3832,5340,5866,8430,9060,9534,11835,12421,12675,13967,16861,
#Deleted in new
chr15	77984035	78001684	chr15:77984035-78001684	0	-	77984214	78001684	789624	2	481,66,	0,17583,
#Deleted in new
chr15	77987991	77988590	chr15:77987991-77988590	4	+	77987991	77987991	16724991	2	33,170,	0,429,
#Deleted in new
chr15	77993404	77995289	chr15:77993404-77995289	3	+	77993404	77993404	8553170	3	66,147,270,	0,283,1615,
#Partially deleted in new
chr15	77994984	78077652	chr15:77994984-78077652	1	-	77998159	78077652	789624	13	3371,122,186,118,495,194,111,384,239,164,169,154,360,	0,6634,8320,14012,17838,21561,22862,29171,30274,35022,49915,59049,82308,
#Partially deleted in new
chr15	77994985	78077724	chr15:77994985-78077724	3	-	77998254	78077652	789624	13	3318,122,186,118,495,194,111,384,239,164,169,154,432,	0,6633,8319,14011,17837,21560,22861,29170,30273,35021,49914,59048,82307,
#Deleted in new
chr15	77994986	77999381	chr15:77994986-77999381	0	-	77994986	77994986	8553170	1	4395,	0,
#Deleted in new
chr15	77998115	78001954	chr15:77998115-78001954	0	-	77998115	77998115	8553170	2	240,336,	0,3503,
#Deleted in new
chr15	77998243	78001666	chr15:77998243-78001666	0	-	77998243	77998243	8553170	3	112,398,48,	0,259,3375,
#Deleted in new
chr15	77998518	78001663	chr15:77998518-78001663	0	-	77998518	77998518	8553170	2	491,45,	0,3100,
#Partially deleted in new
chr15	78001703	78003579	chr15:78001703-78003579	0	-	78001703	78001703	8553170	2	37,275,	0,1601,
#Partially deleted in new
chr15	78002481	78017286	chr15:78002481-78017286	0	-	78002481	78002481	8553170	4	1009,118,495,741,	0,6515,10341,14064,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	78024400	78025628	chr15:78024400-78025628	0	-	78024400	78024400	8553170	2	139,370,	0,858,
#Partially deleted in new
chr15	78024415	78066123	chr15:78024415-78066123	0	-	78024415	78066049	789624	6	124,239,164,169,154,98,	0,843,5591,20484,29618,41610,
#Partially deleted in new
chr15	78044996	78054001	chr15:78044996-78054001	0	-	78044996	78044996	8553170	2	72,215,	0,8790,
#Partially deleted in new
chr15	78077807	78104370	chr15:78077807-78104370	1	+	78098070	78103515	789624	6	131,86,166,213,660,906,	0,16308,20121,20576,23091,25657,
#Deleted in new
chr15	78091171	78091297	chr15:78091171-78091297	3	-	78091171	78091171	8553170	1	126,	0,
#Partially deleted in new
chr15	78092584	78104909	chr15:78092584-78104909	3	+	78092584	78103515	789624	6	176,90,166,213,660,1445,	0,1527,5344,5799,8314,10880,
#Partially deleted in new
chr15	78104605	78131544	chr15:78104605-78131544	3	-	78105310	78131215	789624	6	727,196,148,112,35,380,	0,1133,4629,6559,19099,26559,
#Partially deleted in new
chr15	78104648	78131535	chr15:78104648-78131535	1	-	78105310	78111233	789624	5	684,196,148,112,371,	0,1090,4586,6516,26516,
#Partially deleted in new
chr15	78105011	78131433	chr15:78105011-78131433	1	-	78105310	78131215	789624	4	321,196,148,269,	0,727,4223,26153,
#Partially deleted in new
chr15	78105146	78111251	chr15:78105146-78111251	0	-	78109404	78111251	789624	4	186,196,275,87,	0,592,4088,6018,
#Partially deleted in new
chr15	78105187	78111266	chr15:78105187-78111266	0	-	78110688	78111266	789624	5	145,196,148,78,102,	0,551,4047,5468,5977,
#Partially deleted in new
chr15	78105283	78131271	chr15:78105283-78131271	0	-	78105889	78131215	789624	5	49,196,148,35,107,	0,455,3951,18421,25881,
#Partially deleted in new
chr15	78105298	78131225	chr15:78105298-78131225	0	-	78105298	78131215	789624	5	34,148,112,35,61,	0,3936,5866,18406,25866,
#Partially deleted in new
chr15	78105489	78131263	chr15:78105489-78131263	1	-	78105647	78111233	789624	4	445,148,112,99,	0,3745,5675,25675,
#Partially deleted in new
chr15	78105853	78131235	chr15:78105853-78131235	0	-	78105853	78131215	789624	4	81,275,35,71,	0,3381,17851,25311,
#Partially deleted in new
chr15	78109287	78131271	chr15:78109287-78131271	0	-	78109287	78111233	789624	5	95,112,94,35,107,	0,1877,11280,14417,21877,
#Partially deleted in new
chr15	78131497	78157579	chr15:78131497-78157579	0	+	78131497	78131497	8553170	4	134,275,132,32,	0,14818,25533,26050,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	78141242	78143173	chr15:78141242-78143173	3	+	78141242	78141242	8553170	1	1931,	0,
#Partially deleted in new
chr15	78149320	78171949	chr15:78149320-78171949	3	+	78149403	78169005	0	11	110,63,84,115,188,134,103,65,85,153,3028,	0,5892,8227,10771,12260,12913,14186,14395,15671,16829,19601,
#Partially deleted in new
chr15	78149325	78166200	chr15:78149325-78166200	0	+	78149403	78161589	789624	9	105,63,84,188,134,103,65,85,51,	0,5887,8222,12255,12908,14181,14390,15666,16824,
#Partially deleted in new
chr15	78149359	78169560	chr15:78149359-78169560	1	+	78149403	78169005	789624	11	71,63,84,115,83,134,103,65,85,153,639,	0,5853,8188,10732,12326,12874,14147,14356,15632,16790,19562,
#Partially deleted in new
chr15	78149359	78169715	chr15:78149359-78169715	0	+	78149403	78156931	789624	12	71,63,255,84,115,188,134,103,65,85,153,794,	0,5853,7548,8188,10732,12221,12874,14147,14356,15632,16790,19562,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	78149361	78160206	chr15:78149361-78160206	0	+	78157607	78160206	789624	5	69,256,63,84,115,	0,1927,5851,8186,10730,
#Partially deleted in new
chr15	78149361	78162367	chr15:78149361-78162367	0	+	78149403	78162367	789624	5	69,63,115,188,134,	0,5851,10730,12219,12872,
#Partially deleted in new
chr15	78149367	78161768	chr15:78149367-78161768	0	+	78157607	78161768	789624	6	63,39,255,84,115,188,	0,5845,7540,8180,10724,12213,
#Partially deleted in new
chr15	78149372	78161768	chr15:78149372-78161768	0	+	78149403	78157611	789624	5	58,63,59,115,188,	0,5840,8200,10719,12208,
#Partially deleted in new
chr15	78149376	78163563	chr15:78149376-78163563	0	+	78149403	78161589	789624	6	54,63,84,188,134,94,	0,5836,8171,12204,12857,14093,
#Partially deleted in new
chr15	78149376	78161692	chr15:78149376-78161692	0	+	78149403	78156931	789624	5	54,63,255,84,112,	0,5836,7531,8171,12204,
#Partially deleted in new
chr15	78149376	78162310	chr15:78149376-78162310	0	+	78157607	78162310	789624	7	54,157,63,84,115,188,77,	0,1427,5836,8171,10715,12204,12857,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	78149376	78157631	chr15:78149376-78157631	0	+	78157607	78157631	789624	4	54,385,63,84,	0,5058,5836,8171,
#Partially deleted in new
chr15	78149377	78169674	chr15:78149377-78169674	0	+	78149377	78149377	8553170	11	53,63,724,115,188,159,103,65,85,153,753,	0,5835,7530,10714,12203,12831,14129,14338,15614,16772,19544,
#Partially deleted in new
chr15	78149379	78169283	chr15:78149379-78169283	1	+	78149403	78169005	789624	3	51,153,362,	0,16770,19542,
#Partially deleted in new
chr15	78149379	78168966	chr15:78149379-78168966	0	+	78149403	78161589	789624	10	51,63,84,188,134,140,65,85,153,45,	0,5833,8168,12201,12854,14090,14336,15612,16770,19542,
#Partially deleted in new
chr15	78149391	78155732	chr15:78149391-78155732	0	+	78149391	78149391	8553170	2	39,520,	0,5821,
#Partially deleted in new
chr15	78149403	78156931	chr15:78149403-78156931	1	+	78149403	78156931	789624	3	27,63,24,	0,5809,7504,
#Partially deleted in new
chr15	78149408	78161633	chr15:78149408-78161633	0	+	78149408	78156931	789624	6	22,63,255,59,115,53,	0,5804,7499,8164,10683,12172,
#Partially deleted in new
chr15	78156922	78169671	chr15:78156922-78169671	0	+	78156922	78156922	8553170	8	709,115,188,134,103,65,153,750,	0,3169,4658,5311,6584,6793,9227,11999,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	78159969	78170542	chr15:78159969-78170542	0	+	78159969	78159969	8553170	8	237,188,134,103,65,85,153,1621,	0,1611,2264,3537,3746,5022,6180,8952,
#Partially deleted in new
chr15	78163715	78166473	chr15:78163715-78166473	1	+	78163715	78166222	789624	2	65,324,	0,2434,
#Partially deleted in new
chr15	78166104	78169258	chr15:78166104-78169258	0	+	78166104	78166104	8553170	2	198,337,	0,2817,
#Partially deleted in new
chr15	78166240	78171255	chr15:78166240-78171255	0	+	78166240	78169005	789624	3	62,156,206,	0,2681,4809,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr15	78167467	78234707	chr15:78167467-78234707	3	-	78171443	78234501	789624	14	4062,247,140,218,231,182,177,150,81,121,89,221,101,337,	0,6125,6917,11146,12082,13287,14501,14998,15237,26038,26464,27038,40534,66903,
#Partially deleted in new
chr15	78170853	78234525	chr15:78170853-78234525	0	-	78182760	78234501	789624	10	676,247,140,218,231,182,177,150,81,155,	0,2739,3531,7760,8696,9901,11115,11612,11851,63517,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	78170913	78245688	chr15:78170913-78245688	1	-	78171443	78182722	789624	10	616,247,140,218,231,182,177,150,81,420,	0,2679,3471,7700,8636,9841,11055,11552,11791,74355,
#Deleted in new
chr15	78173592	78174812	chr15:78173592-78174812	0	-	78173592	78173592	8553170	2	247,428,	0,792,
#Deleted in new
chr15	78178807	78181083	chr15:78178807-78181083	0	-	78178807	78178807	8553170	3	24,231,329,	0,742,1947,
#Partially deleted in new
chr15	78178962	78234574	chr15:78178962-78234574	0	-	78194614	78234501	789624	10	18,231,182,177,150,81,121,89,221,204,	0,587,1792,3006,3503,3742,14543,14969,15543,55408,
#Partially deleted in new
chr15	78179737	78182886	chr15:78179737-78182886	0	-	78179737	78179737	8553170	5	43,182,177,150,182,	0,1017,2231,2728,2967,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	78182704	78234602	chr15:78182704-78234602	0	-	78226568	78234501	789624	6	81,121,89,221,151,232,	0,10801,11227,11801,43750,51666,
#Partially deleted in new
chr15	78182711	78207785	chr15:78182711-78207785	0	-	78182711	78194637	789624	5	74,121,89,221,54,	0,10794,11220,11794,25020,
#Partially deleted in new
chr15	78182741	78213499	chr15:78182741-78213499	0	-	78182741	78212598	789624	8	44,121,89,221,101,105,178,66,	0,10764,11190,11764,25260,26403,29807,30692,
#Partially deleted in new
chr15	78193611	78234525	chr15:78193611-78234525	0	-	78193611	78234501	789624	5	15,77,221,101,155,	0,320,894,14390,40759,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	78194647	78245688	chr15:78194647-78245688	0	-	78194647	78194647	8553170	3	79,101,420,	0,13354,50621,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	78208054	78245688	chr15:78208054-78245688	0	-	78208054	78208054	8553170	3	48,105,420,	0,1090,37214,
#Partially deleted in new
chr15	78213522	78234625	chr15:78213522-78234625	0	-	78213522	78213522	8553170	2	345,255,	0,20848,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	78250501	78263987	chr15:78250501-78263987	1	-	78250501	78250501	8553170	2	272,116,	0,13370,
#Partially deleted in new
chr15	78257544	78264156	chr15:78257544-78264156	3	-	78257544	78257544	8553170	3	197,86,100,	0,6327,6512,
#Partially deleted in new
chr15	78264085	78282196	chr15:78264085-78282196	3	+	78264313	78280460	789624	8	308,139,181,105,228,231,101,1952,	0,671,6411,9009,10111,11412,15959,16159,
#Deleted in new
chr15	78264144	78266039	chr15:78264144-78266039	1	+	78264313	78265681	789624	3	249,139,559,	0,612,1336,
#Partially deleted in new
chr15	78264543	78280541	chr15:78264543-78280541	0	+	78264763	78275503	789624	8	42,139,181,105,212,231,101,297,	0,213,5953,8551,9653,10954,15501,15701,
#Partially deleted in new
chr15	78264561	78282196	chr15:78264561-78282196	1	+	78264763	78280460	789624	8	24,139,181,105,228,231,101,1952,	0,195,5935,8533,9635,10936,15483,15683,
#Partially deleted in new
chr15	78264561	78274266	chr15:78264561-78274266	0	+	78264763	78273131	789624	5	24,139,181,100,70,	0,195,5935,8538,9635,
#Partially deleted in new
chr15	78264561	78280668	chr15:78264561-78280668	0	+	78264763	78275624	789624	8	24,139,181,105,228,118,101,424,	0,195,5935,8533,9635,11049,15483,15683,
#Partially deleted in new
chr15	78264573	78282192	chr15:78264573-78282192	1	+	78264763	78280460	789624	7	322,181,105,228,231,101,1948,	0,5923,8521,9623,10924,15471,15671,
#Partially deleted in new
chr15	78264608	78280059	chr15:78264608-78280059	0	+	78264763	78273124	789624	5	287,105,228,231,15,	0,8486,9588,10889,15436,
#Partially deleted in new
chr15	78266180	78280684	chr15:78266180-78280684	1	+	78266242	78280460	789624	7	113,181,105,228,231,101,440,	0,4316,6914,8016,9317,13864,14064,
#Partially deleted in new
chr15	78270016	78275436	chr15:78270016-78275436	0	+	78270016	78270016	8553170	3	661,105,1240,	0,3078,4180,
#Partially deleted in new
chr15	78274996	78280545	chr15:78274996-78280545	0	+	78274996	78274996	8553170	3	732,101,301,	0,5048,5248,
#Partially deleted in new
chr15	78277834	78289637	chr15:78277834-78289637	0	-	78278078	78289637	789624	4	256,94,94,19,	0,373,10454,11784,
#Partially deleted in new
chr15	78277834	78290029	chr15:78277834-78290029	0	-	78278250	78290029	789624	7	256,94,79,93,94,94,79,	0,373,7426,8206,10454,11784,12116,
#Deleted in new
chr15	78279136	78282196	chr15:78279136-78282196	0	+	78279136	78279136	8553170	2	1009,1952,	0,1108,
#Deleted in new
chr15	78280949	78282190	chr15:78280949-78282190	3	-	78280949	78280949	8553170	2	92,277,	0,964,
#Partially deleted in new
chr15	78283234	78299794	chr15:78283234-78299794	3	-	78283431	78295686	0	11	287,79,93,94,94,149,173,106,28,51,233,	0,2026,2806,5054,6384,6716,9381,9932,11711,12440,16327,
#Partially deleted in new
chr15	78283234	78299605	chr15:78283234-78299605	1	-	78283431	78295686	0	11	287,79,93,94,94,149,173,106,28,119,44,	0,2026,2806,5054,6384,6716,9381,9932,11711,12440,16327,
#Partially deleted in new
chr15	78283234	78285900	chr15:78283234-78285900	0	-	78283234	78283234	8553170	2	287,640,	0,2026,
#Partially deleted in new
chr15	78283234	78286133	chr15:78283234-78286133	0	-	78283234	78283234	8553170	3	287,464,93,	0,2026,2806,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	78283234	78286863	chr15:78283234-78286863	0	-	78283234	78283234	8553170	1	3629,	0,
#Partially deleted in new
chr15	78283255	78299591	chr15:78283255-78299591	1	-	78283431	78295686	789624	9	266,79,93,94,94,149,28,51,30,	0,2005,2785,5033,6363,6695,11690,12419,16306,
#Partially deleted in new
chr15	78283467	78299570	chr15:78283467-78299570	0	-	78283467	78295686	789624	11	54,79,93,94,94,149,173,106,28,51,115,	0,1793,2573,4821,6151,6483,9148,9699,11478,12207,15988,
#Partially deleted in new
chr15	78288288	78299601	chr15:78288288-78299601	0	-	78292884	78295686	789624	8	94,94,149,270,106,28,51,40,	0,1330,1662,4327,4878,6657,7386,11273,
#Partially deleted in new
chr15	78288338	78299597	chr15:78288338-78299597	0	-	78288909	78295686	789624	9	44,75,94,149,173,106,28,51,36,	0,504,1280,1612,4277,4828,6607,7336,11223,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	78290526	78291221	chr15:78290526-78291221	7	-	78290526	78290526	16724991	1	695,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	78291761	78299607	chr15:78291761-78299607	0	-	78291761	78291761	8553170	5	1124,106,28,51,46,	0,1405,3184,3913,7800,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	78292073	78299609	chr15:78292073-78299609	0	-	78292073	78292073	8553170	5	715,106,28,51,48,	0,1093,2872,3601,7488,
#Partially deleted in new
chr15	78292631	78299636	chr15:78292631-78299636	0	-	78292631	78292631	8553170	4	254,106,119,75,	0,535,3043,6930,
#Deleted in new
chr15	78293285	78296049	chr15:78293285-78296049	3	+	78293285	78293285	8553170	2	67,382,	0,2382,
#Partially deleted in new
chr15	78294474	78299614	chr15:78294474-78299614	0	-	78294474	78294474	8553170	3	499,51,53,	0,1200,5087,
#Partially deleted in new
chr15	78294736	78299703	chr15:78294736-78299703	0	-	78294736	78294736	8553170	2	989,142,	0,4825,
#Deleted in new
chr15	78299700	78299924	chr15:78299700-78299924	3	+	78299700	78299700	8553170	1	224,	0,
#Deleted in new
chr15	78339207	78341757	chr15:78339207-78341757	3	-	78339207	78339207	8553170	1	2550,	0,
#Partially deleted in new
chr15	78340323	78348230	chr15:78340323-78348230	3	+	78340428	78347977	789624	4	175,179,114,304,	0,719,3175,7603,
#Partially deleted in new
chr15	78340475	78348078	chr15:78340475-78348078	0	+	78340475	78343521	789624	4	23,294,114,152,	0,567,3023,7451,
#Deleted in new
chr15	78347820	78348221	chr15:78347820-78348221	0	+	78347820	78347820	8553170	1	401,	0,
#Deleted in new
chr15	78382572	78383155	chr15:78382572-78383155	7	+	78382572	78382572	16724991	1	583,	0,
#Partially deleted in new
chr15	78437430	78465264	chr15:78437430-78465264	0	+	78462986	78465264	789624	4	291,87,166,14,	0,2364,25491,27820,
#Partially deleted in new
chr15	78438175	78466436	chr15:78438175-78466436	0	+	78438337	78465285	789624	4	181,87,138,166,	0,1619,27075,28095,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr15	78438188	78501456	chr15:78438188-78501456	3	+	78438337	78498143	789624	22	168,87,166,138,219,70,184,140,172,101,117,160,136,85,157,125,105,143,148,123,186,3424,	0,1606,24733,27062,28082,32343,33552,35053,37999,40108,45129,46572,47516,49544,49991,50458,52233,52430,55720,55953,58937,59844,
#Partially deleted in new
chr15	78438227	78471801	chr15:78438227-78471801	0	+	78438337	78462976	789624	7	129,82,166,138,219,70,61,	0,1567,24694,27023,28043,32304,33513,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	78438283	78476700	chr15:78438283-78476700	1	+	78438337	78473390	789624	8	73,87,166,138,219,70,184,3459,	0,1511,24638,26967,27987,32248,33457,34958,
#Partially deleted in new
chr15	78438308	78498209	chr15:78438308-78498209	0	+	78438337	78471774	789624	21	48,87,166,138,219,184,140,172,101,117,160,136,85,157,125,105,143,148,123,186,177,	0,1486,24613,26942,27962,33432,34933,37879,39988,45009,46452,47396,49424,49871,50338,52113,52310,55600,55833,58817,59724,
#Partially deleted in new
chr15	78438421	78462944	chr15:78438421-78462944	0	+	78438421	78438421	8553170	3	435,87,23,	0,1373,24500,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	78465298	78470948	chr15:78465298-78470948	0	+	78465298	78465298	8553170	4	90,219,70,229,	0,972,5233,5421,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	78480056	78481820	chr15:78480056-78481820	3	-	78480056	78480056	8553170	2	204,121,	0,1643,
#Partially deleted in new
chr15	78483419	78488756	chr15:78483419-78488756	0	+	78483419	78483419	8553170	5	15,160,136,85,577,	0,1341,2285,4313,4760,
#Partially deleted in new
chr15	78494209	78497338	chr15:78494209-78497338	0	+	78494209	78497338	789624	2	55,213,	0,2916,
#Partially deleted in new
chr15	78507563	78533670	chr15:78507563-78533670	3	+	78513088	78533670	789624	5	108,342,140,184,461,	0,5520,7404,19816,25646,
#Partially deleted in new
chr15	78507563	78537372	chr15:78507563-78537372	1	+	78513088	78537301	789624	5	108,342,140,184,73,	0,5520,7404,19816,29736,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	78507581	78528801	chr15:78507581-78528801	0	+	78513088	78518629	789624	5	90,342,140,186,1422,	0,5502,7386,11006,19798,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	78507616	78528264	chr15:78507616-78528264	1	+	78513088	78527583	789624	4	55,342,140,885,	0,5467,7351,19763,
#Partially deleted in new
chr15	78513088	78537372	chr15:78513088-78537372	1	+	78513088	78537301	789624	4	337,140,184,73,	0,1879,14291,24211,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	78513088	78536645	chr15:78513088-78536645	1	+	78513088	78533670	789624	4	337,140,184,3436,	0,1879,14291,20121,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	78537680	78538946	chr15:78537680-78538946	3	+	78537680	78537680	8553170	1	1266,	0,
#Partially deleted in new
chr15	78540404	78549037	chr15:78540404-78549037	1	+	78541927	78548944	789624	9	135,26,43,70,78,89,131,124,248,	0,1500,1772,2171,3785,4464,5229,6170,8385,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	78540412	78552419	chr15:78540412-78552419	3	+	78541927	78548944	0	9	127,26,43,163,78,89,131,124,3630,	0,1492,1764,2070,3777,4456,5221,6162,8377,
#Partially deleted in new
chr15	78540420	78549186	chr15:78540420-78549186	1	+	78541927	78548944	0	9	43,26,43,163,78,89,131,124,397,	0,1484,1756,2062,3769,4448,5213,6154,8369,
#Partially deleted in new
chr15	78540426	78549204	chr15:78540426-78549204	1	+	78544193	78548944	0	8	113,26,43,78,89,131,124,415,	0,1478,1750,3763,4442,5207,6148,8363,
#Partially deleted in new
chr15	78540426	78546684	chr15:78540426-78546684	0	+	78542508	78546684	789624	7	113,26,163,78,89,131,110,	0,1478,2056,3763,4442,5207,6148,
#Deleted in new
chr15	78540426	78542683	chr15:78540426-78542683	0	+	78540426	78540426	8553170	3	37,26,507,	0,1478,1750,
#Partially deleted in new
chr15	78540439	78546696	chr15:78540439-78546696	0	+	78541927	78546696	789624	7	100,26,43,163,89,131,122,	0,1465,1737,2043,4429,5194,6135,
#Partially deleted in new
chr15	78540443	78544932	chr15:78540443-78544932	0	+	78540443	78540443	8553170	5	96,26,469,78,64,	0,1461,1733,3746,4425,
#Partially deleted in new
chr15	78540443	78548906	chr15:78540443-78548906	0	+	78540443	78540443	8553170	6	2202,78,89,131,124,117,	0,3746,4425,5190,6131,8346,
#Deleted in new
chr15	78540458	78542559	chr15:78540458-78542559	0	+	78540458	78540458	8553170	2	81,655,	0,1446,
#Partially deleted in new
chr15	78540460	78549204	chr15:78540460-78549204	0	+	78540460	78540460	8553170	6	1759,78,89,131,124,415,	0,3729,4408,5173,6114,8329,
#Partially deleted in new
chr15	78540466	78546610	chr15:78540466-78546610	0	+	78540466	78540466	8553170	8	73,26,43,163,78,89,131,32,	0,1438,1710,2016,3723,4402,5167,6112,
#Partially deleted in new
chr15	78540477	78548970	chr15:78540477-78548970	1	+	78541927	78548807	789624	8	62,26,43,163,78,89,131,181,	0,1427,1699,2005,3712,4391,5156,8312,
#Partially deleted in new
chr15	78540734	78548820	chr15:78540734-78548820	0	+	78541927	78548820	789624	9	101,26,43,163,78,89,131,124,31,	0,1170,1442,1748,3455,4134,4899,5840,8055,
#Partially deleted in new
chr15	78540813	78549176	chr15:78540813-78549176	1	+	78541927	78548880	789624	6	22,26,43,163,78,387,	0,1091,1363,1669,3376,7976,
#Partially deleted in new
chr15	78540846	78546696	chr15:78540846-78546696	0	+	78541927	78546696	789624	8	104,26,43,163,78,89,131,122,	0,1058,1330,1636,3343,4022,4787,5728,
#Deleted in new
chr15	78541555	78542375	chr15:78541555-78542375	0	+	78541555	78541555	8553170	2	375,199,	0,621,
#Partially deleted in new
chr15	78541689	78548868	chr15:78541689-78548868	0	+	78541927	78548868	789624	9	82,26,43,163,78,89,131,124,79,	0,215,487,793,2500,3179,3944,4885,7100,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	78543817	78545677	chr15:78543817-78545677	0	+	78543817	78543817	8553170	3	450,89,44,	0,1051,1816,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	78544575	78546698	chr15:78544575-78546698	0	+	78544845	78546698	789624	3	382,131,124,	0,1058,1999,
#Partially deleted in new
chr15	78544644	78548996	chr15:78544644-78548996	1	+	78544845	78548807	789624	3	313,131,207,	0,989,4145,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	78565519	78595269	chr15:78565519-78595269	3	+	78565719	78593253	789624	6	306,152,45,110,832,2178,	0,15291,21125,22794,24285,27572,
#Partially deleted in new
chr15	78565570	78593535	chr15:78565570-78593535	1	+	78565719	78593116	789624	6	255,152,45,110,45,444,	0,15240,21074,22743,24234,27521,
#Partially deleted in new
chr15	78580889	78593274	chr15:78580889-78593274	0	+	78580889	78593116	789624	5	73,45,110,294,183,	0,5755,7424,8915,12202,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	78589122	78591276	chr15:78589122-78591276	3	-	78589122	78589122	8553170	1	2154,	0,
#Partially deleted in new
chr15	78590361	78593701	chr15:78590361-78593701	0	+	78590361	78593116	789624	2	145,610,	0,2730,
#Partially deleted in new
chr15	78593051	78621295	chr15:78593051-78621295	1	-	78593110	78620794	0	6	140,1012,110,45,140,583,	0,8201,23972,25565,25724,27661,
#Partially deleted in new
chr15	78593051	78596732	chr15:78593051-78596732	0	-	78593051	78593051	8553170	2	140,193,	0,3488,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	78595304	78621179	chr15:78595304-78621179	3	-	78596603	78620794	0	6	1428,1012,110,45,140,467,	0,5948,21719,23312,23471,25408,
#Partially deleted in new
chr15	78618379	78620789	chr15:78618379-78620789	0	-	78618379	78618379	8553170	3	282,140,77,	0,396,2333,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	78618629	78619278	chr15:78618629-78619278	0	-	78618629	78618796	789624	2	32,503,	0,146,
#Partially deleted in new
chr15	78618848	78620261	chr15:78618848-78620261	0	-	78618848	78618848	8553170	2	67,525,	0,888,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	78624118	78641245	chr15:78624118-78641245	3	-	78625132	78641133	0	6	1173,979,110,45,149,167,	0,4848,6957,7169,11320,16960,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	78624407	78641245	chr15:78624407-78641245	1	-	78624954	78641133	0	5	884,110,45,149,167,	0,6668,6880,11031,16671,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	78625894	78628193	chr15:78625894-78628193	3	+	78625894	78625894	8553170	2	1671,309,	0,1990,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	78629352	78660532	chr15:78629352-78660532	0	-	78634733	78649424	789624	12	593,258,45,118,149,61,94,120,479,52,90,21,	0,1575,1935,5269,6086,20026,23225,26191,26859,27979,28927,31159,
#Partially deleted in new
chr15	78660643	78703884	chr15:78660643-78703884	7	+	78660643	78660643	16724991	4	226,140,165,37,	0,751,32038,43204,
#Deleted in new
chr15	78661046	78661576	chr15:78661046-78661576	7	-	78661046	78661046	16724991	1	530,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	78703775	78729770	chr15:78703775-78729770	4	+	78703775	78703775	16724991	5	197,119,56,120,68,	0,2168,15529,25176,25927,
#Partially deleted in new
chr15	78727176	78736684	chr15:78727176-78736684	5	+	78727176	78727176	16724991	13	84,120,81,39,51,82,107,87,108,88,484,101,193,	0,1775,3818,4744,5044,5195,5373,6488,6683,6983,7463,8218,9315,
#Partially deleted in new
chr15	78729040	78733956	chr15:78729040-78733956	4	+	78729040	78729040	16724991	8	31,81,39,51,82,107,87,97,	0,1954,2880,3180,3331,3509,4624,4819,
#Deleted in new
chr15	78733691	78735420	chr15:78733691-78735420	4	+	78733691	78733691	16724991	4	60,108,88,98,	0,168,468,1631,
#Deleted in new
chr15	78749832	78750107	chr15:78749832-78750107	7	-	78749832	78749832	16724991	1	275,	0,
#Partially deleted in new
chr15	78752106	78753373	chr15:78752106-78753373	7	+	78752106	78752106	16724991	2	131,261,	0,1006,
#Deleted in new
chr15	78753113	78753308	chr15:78753113-78753308	5	+	78753113	78753113	16724991	1	195,	0,
#Partially deleted in new
chr15	78759202	78811431	chr15:78759202-78811431	3	-	78759420	78811220	789624	24	376,163,147,174,153,1407,214,127,142,245,121,134,170,146,93,145,144,150,125,84,197,166,356,311,	0,3200,4496,4723,5352,6442,8176,8930,11959,12382,13880,14964,15421,16985,17546,18241,29028,30486,31467,31937,37387,38745,40989,51918,
#Deleted in new
chr15	78763950	78765113	chr15:78763950-78765113	0	-	78763950	78763950	8553170	2	149,559,	0,604,
#Partially deleted in new
chr15	78766832	78811283	chr15:78766832-78811283	0	-	78766832	78766832	8553170	10	219,127,68,150,125,84,197,166,356,163,	0,1300,21398,22856,23837,24307,29757,31115,33359,44288,
#Partially deleted in new
chr15	78770625	78800544	chr15:78770625-78800544	0	-	78770625	78770625	8553170	12	1204,121,134,170,1401,144,150,125,84,197,166,353,	0,2457,3541,3998,5562,17605,19063,20044,20514,25964,27322,29566,
#Partially deleted in new
chr15	78770794	78811232	chr15:78770794-78811232	0	-	78770794	78770794	8553170	15	1035,121,134,170,146,93,145,144,150,125,84,197,166,356,112,	0,2288,3372,3829,5393,5954,6649,17436,18894,19875,20345,25795,27153,29397,40326,
#Partially deleted in new
chr15	78810486	78897730	chr15:78810486-78897730	1	+	78840560	78897067	789624	13	555,124,47,68,87,81,26,89,102,89,173,85,748,	0,30065,67726,70025,75654,76782,80502,80997,81725,83052,83571,84333,86496,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	78847666	78886161	chr15:78847666-78886161	0	+	78847666	78847666	8553170	4	415,47,68,21,	0,30546,32845,38474,
#Partially deleted in new
chr15	78863246	78863729	chr15:78863246-78863729	7	-	78863246	78863246	16724991	1	483,	0,
#Partially deleted in new
chr15	78872775	78897733	chr15:78872775-78897733	1	+	78873017	78897067	0	12	282,47,68,87,81,26,89,102,89,173,85,751,	0,5437,7736,13365,14493,18213,18708,19436,20763,21282,22044,24207,
#Partially deleted in new
chr15	78872813	78898133	chr15:78872813-78898133	3	+	78873017	78897067	0	13	244,47,68,117,87,81,26,89,102,89,173,85,1151,	0,5399,7698,12153,13327,14455,18175,18670,19398,20725,21244,22006,24169,
#Partially deleted in new
chr15	78872815	78886374	chr15:78872815-78886374	0	+	78872815	78872815	8553170	4	242,47,68,234,	0,5397,7696,13325,
#Partially deleted in new
chr15	78872886	78892259	chr15:78872886-78892259	0	+	78887290	78892259	789624	8	232,47,68,87,81,26,89,48,	0,5326,7625,13254,14382,18102,18597,19325,
#Partially deleted in new
chr15	78872953	78894908	chr15:78872953-78894908	1	+	78873017	78894908	789624	10	104,47,68,87,26,89,102,89,173,89,	0,5259,7558,13187,18035,18530,19258,20585,21104,21866,
#Partially deleted in new
chr15	78872972	78893018	chr15:78872972-78893018	0	+	78872972	78872972	8553170	7	85,47,68,87,26,89,807,	0,5240,7539,13168,18016,18511,19239,
#Partially deleted in new
chr15	78872974	78893618	chr15:78872974-78893618	0	+	78887290	78893618	789624	8	83,68,87,81,26,89,102,80,	0,7537,13166,14294,18014,18509,19237,20564,
#Partially deleted in new
chr15	78872983	78891705	chr15:78872983-78891705	0	+	78872983	78872983	8553170	6	74,47,68,87,81,717,	0,5229,7528,13157,14285,18005,
#Partially deleted in new
chr15	78872986	78887443	chr15:78872986-78887443	0	+	78872986	78872986	8553170	5	71,47,68,87,175,	0,5226,7525,13154,14282,
#Partially deleted in new
chr15	78873004	78897389	chr15:78873004-78897389	1	+	78887290	78897067	0	12	214,47,68,87,81,26,89,102,89,173,85,407,	0,5208,7507,13136,14264,17984,18479,19207,20534,21053,21815,23978,
#Partially deleted in new
chr15	78873024	78897514	chr15:78873024-78897514	0	+	78873024	78873024	8553170	7	33,47,68,87,81,85,532,	0,5188,7487,13116,14244,21795,23958,
#Partially deleted in new
chr15	78873029	78897077	chr15:78873029-78897077	1	+	78887290	78897067	0	10	28,87,81,26,89,102,89,173,85,95,	0,13111,14239,17959,18454,19182,20509,21028,21790,23953,
#Partially deleted in new
chr15	78873042	78893601	chr15:78873042-78893601	0	+	78873042	78873042	8553170	8	15,47,68,87,81,584,102,63,	0,5170,7469,13098,14226,17946,19169,20496,
#Partially deleted in new
chr15	78873722	78893601	chr15:78873722-78893601	0	+	78887290	78893601	789624	9	117,47,68,87,81,26,89,102,63,	0,4490,6789,12418,13546,17266,17761,18489,19816,
#Partially deleted in new
chr15	78873820	78894161	chr15:78873820-78894161	0	+	78887290	78894161	789624	10	100,47,68,87,81,26,89,102,89,104,	0,4392,6691,12320,13448,17168,17663,18391,19718,20237,
#Partially deleted in new
chr15	78876491	78894134	chr15:78876491-78894134	0	+	78876516	78894134	789624	10	95,47,68,87,81,26,89,102,89,77,	0,1721,4020,9649,10777,14497,14992,15720,17047,17566,
#Partially deleted in new
chr15	78877764	78887297	chr15:78877764-78887297	0	+	78877764	78877764	8553170	5	196,47,68,255,29,	0,448,2747,8376,9504,
#Partially deleted in new
chr15	78877777	78891573	chr15:78877777-78891573	0	+	78887290	78891573	789624	7	183,47,68,87,81,26,90,	0,435,2734,8363,9491,13211,13706,
#Partially deleted in new
chr15	78878239	78893590	chr15:78878239-78893590	0	+	78878239	78893590	789624	9	20,68,114,87,81,26,89,102,52,	0,2272,6730,7901,9029,12749,13244,13972,15299,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	78890641	78893599	chr15:78890641-78893599	0	+	78890641	78890641	8553170	4	373,89,102,61,	0,842,1570,2897,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	78891551	78894753	chr15:78891551-78894753	0	+	78891551	78891551	8553170	4	21,102,89,696,	0,660,1987,2506,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	78898839	78898936	chr15:78898839-78898936	3	-	78898839	78898839	8553170	1	97,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	78906126	78906809	chr15:78906126-78906809	3	+	78906126	78906126	8553170	1	683,	0,
#Partially deleted in new
chr15	78921057	78945091	chr15:78921057-78945091	3	-	78922129	78944981	0	12	1148,126,107,69,82,56,87,105,71,106,32,201,	0,1935,4276,6655,8354,10393,11314,13920,14622,16260,18082,23833,
#Partially deleted in new
chr15	78921764	78926904	chr15:78921764-78926904	0	-	78921764	78921764	8553170	3	441,126,1571,	0,1228,3569,
#Partially deleted in new
chr15	78921764	78944951	chr15:78921764-78944951	0	-	78932020	78944951	8553170	13	441,126,107,69,82,56,138,87,105,71,106,32,61,	0,1228,3569,5948,7647,9686,10136,10607,13213,13915,15553,17375,23126,
#Partially deleted in new
chr15	78921768	78945062	chr15:78921768-78945062	0	-	78927726	78944981	789624	8	437,126,107,69,82,56,73,172,	0,1224,3565,5944,7643,9682,10603,23122,
#Partially deleted in new
chr15	78921774	78945046	chr15:78921774-78945046	0	-	78937757	78944981	789624	13	431,126,107,69,82,591,87,105,71,106,138,32,156,	0,1218,3559,5938,7637,9676,10597,13203,13905,15543,15911,17365,23116,
#Partially deleted in new
chr15	78922116	78932030	chr15:78922116-78932030	0	-	78922116	78922116	8553170	7	89,126,107,69,82,56,162,	0,876,3217,5596,7295,9334,9752,
#Partially deleted in new
chr15	78922129	78944981	chr15:78922129-78944981	1	-	78922129	78944981	789624	13	76,126,107,69,82,56,87,105,71,106,32,24,31,	0,863,3204,5583,7282,9321,10242,12848,13550,15188,17010,22761,22821,
#Partially deleted in new
chr15	78923058	78937233	chr15:78923058-78937233	0	-	78923058	78923058	8553170	9	60,107,69,82,56,87,105,71,199,	0,2275,4654,6353,8392,9313,11919,12621,13976,
#Partially deleted in new
chr15	78927206	78931953	chr15:78927206-78931953	0	-	78927206	78927206	8553170	4	575,82,56,85,	0,2205,4244,4662,
#Partially deleted in new
chr15	78927608	78935750	chr15:78927608-78935750	0	-	78927608	78927608	8553170	6	173,82,56,87,105,71,	0,1803,3842,4763,7369,8071,
#Partially deleted in new
chr15	78929410	78945094	chr15:78929410-78945094	0	-	78944855	78944981	789624	8	83,56,87,105,71,106,32,317,	0,2040,2961,5567,6269,7907,9729,15367,
#Partially deleted in new
chr15	78929411	78949574	chr15:78929411-78949574	0	-	78929411	78937318	789624	8	82,56,87,105,71,179,32,107,	0,2039,2960,5566,6268,7906,9728,20056,
#Partially deleted in new
chr15	78929440	78937715	chr15:78929440-78937715	0	-	78929440	78929440	8553170	6	53,56,87,105,71,398,	0,2010,2931,5537,6239,7877,
#Partially deleted in new
chr15	78931884	78937186	chr15:78931884-78937186	0	-	78931884	78931884	8553170	5	154,87,105,71,152,	0,487,3093,3795,5150,
#Partially deleted in new
chr15	78932005	78945046	chr15:78932005-78945046	0	-	78932005	78932005	8553170	7	36,87,105,71,106,32,156,	0,366,2972,3674,5312,7134,12885,
#Partially deleted in new
chr15	78934843	78944998	chr15:78934843-78944998	0	-	78934843	78934843	8553170	5	239,71,106,32,108,	0,836,2474,4296,10047,
#Partially deleted in new
chr15	78934846	78949501	chr15:78934846-78949501	0	-	78934846	78934846	8553170	5	236,71,106,32,34,	0,833,2471,4293,14621,
#Partially deleted in new
chr15	78937317	78945021	chr15:78937317-78945021	0	-	78937317	78937317	8553170	3	106,32,484,	0,1822,7220,
#Partially deleted in new
chr15	78937412	78945042	chr15:78937412-78945042	0	-	78937412	78937412	8553170	3	84,32,152,	0,1727,7478,
#Partially deleted in new
chr15	78959946	79090773	chr15:78959946-79090773	1	-	78962143	79090498	789624	28	2290,69,118,80,198,85,104,61,113,107,171,126,374,258,39,83,137,64,161,119,110,194,80,254,93,148,107,551,	0,11919,13356,20673,25060,30242,31744,35793,38149,38772,39796,41715,43855,46230,52542,55380,57823,60094,65367,67794,71453,72176,75184,86799,89549,98387,104473,130276,
#Partially deleted in new
chr15	78959946	79090764	chr15:78959946-79090764	3	-	78962143	79090498	789624	27	2290,69,118,80,198,85,104,61,113,107,171,126,374,249,83,137,64,161,119,110,194,80,254,93,148,107,542,	0,11919,13356,20673,25060,30242,31744,35793,38149,38772,39796,41715,43855,46239,55380,57823,60094,65367,67794,71453,72176,75184,86799,89549,98387,104473,130276,
#Partially deleted in new
chr15	78961941	79005665	chr15:78961941-79005665	1	-	78962143	79003946	789624	14	295,69,118,80,198,85,104,61,113,107,171,126,374,949,	0,9924,11361,18678,23065,28247,29749,33798,36154,36777,37801,39720,41860,42775,
#Partially deleted in new
chr15	78971902	78979125	chr15:78971902-78979125	0	-	78971902	78971902	8553170	3	32,118,198,	0,1400,7025,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr15	78978379	79064663	chr15:78978379-79064663	0	-	78978379	78978379	8553170	24	823,80,198,85,104,61,113,107,171,126,374,258,83,137,64,161,119,110,194,80,254,93,148,244,	0,2240,6627,11809,13311,17360,19716,20339,21363,23282,25422,27797,36947,39390,41661,46934,49361,53020,53743,56751,68366,71116,79954,86040,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	78978888	78985926	chr15:78978888-78985926	3	+	78978888	78978888	789624	2	435,1465,	0,5573,
#Deleted in new
chr15	78980145	78981666	chr15:78980145-78981666	0	-	78980145	78980145	8553170	1	1521,	0,
#Deleted in new
chr15	78980424	78985310	chr15:78980424-78985310	0	-	78980424	78980424	8553170	2	275,304,	0,4582,
#Partially deleted in new
chr15	78980656	78998266	chr15:78980656-78998266	0	-	78980656	78980656	8553170	6	43,198,85,104,61,171,	0,4350,9532,11034,15083,17439,
#Partially deleted in new
chr15	78991711	78998071	chr15:78991711-78998071	0	-	78991711	78991711	8553170	3	83,61,121,	0,4028,6239,
#Partially deleted in new
chr15	79191706	79283825	chr15:79191706-79283825	0	-	79191706	79191706	789624	2	396,177,	0,91942,
#Partially deleted in new
chr15	79191970	79283871	chr15:79191970-79283871	3	-	79191970	79191970	8553170	3	132,173,223,	0,21216,91678,
#Deleted in new
chr15	79209787	79209871	chr15:79209787-79209871	3	+	79209787	79209787	789624	1	84,	0,
#Partially deleted in new
chr15	79213096	79283855	chr15:79213096-79283855	0	-	79213096	79213096	8553170	3	263,142,207,	0,47608,70552,
#Deleted in new
chr15	79236331	79237206	chr15:79236331-79237206	7	+	79236331	79236331	16724991	1	875,	0,
#Partially deleted in new
chr15	79236565	79283831	chr15:79236565-79283831	0	-	79236565	79236565	8553170	2	363,183,	0,47083,
#Partially deleted in new
chr15	79236705	79283841	chr15:79236705-79283841	0	-	79236705	79236705	8553170	3	223,142,193,	0,23999,46943,
#Partially deleted in new
chr15	79236742	79283814	chr15:79236742-79283814	1	-	79236742	79236742	8553170	4	186,82,142,166,	0,23482,23962,46906,
#Partially deleted in new
chr15	79236846	79283945	chr15:79236846-79283945	1	-	79236846	79236846	8553170	4	82,73,142,297,	0,23382,23858,46802,
#Partially deleted in new
chr15	79236880	79283945	chr15:79236880-79283945	0	-	79236880	79236880	8553170	4	48,78,142,297,	0,23348,23824,46768,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	79293284	79298235	chr15:79293284-79298235	3	+	79293284	79294892	789624	1	4951,	0,
#Partially deleted in new
chr15	79311061	79322847	chr15:79311061-79322847	3	+	79311249	79322214	789624	3	356,249,870,	0,2695,10916,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	79311144	79427432	chr15:79311144-79427432	1	+	79311249	79411504	789624	3	273,249,16033,	0,2612,100255,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	79311155	79384721	chr15:79311155-79384721	1	+	79311249	79383018	789624	3	262,249,1754,	0,2601,71812,
#Partially deleted in new
chr15	79311158	79322837	chr15:79311158-79322837	0	+	79311249	79314564	789624	4	259,249,115,860,	0,2598,3382,10819,
#Partially deleted in new
chr15	79315930	79322822	chr15:79315930-79322822	0	+	79315930	79315930	8553170	2	93,845,	0,6047,
#Partially deleted in new
chr15	79432515	79472290	chr15:79432515-79472290	3	+	79456147	79468384	789624	4	25,2348,255,4104,	0,23582,30551,35671,
#Partially deleted in new
chr15	79456095	79471144	chr15:79456095-79471144	0	+	79456147	79463706	789624	4	2350,255,66,2958,	0,6971,7599,12091,
#Deleted in new
chr15	79559255	79560304	chr15:79559255-79560304	7	-	79559255	79559255	16724991	1	1049,	0,
#Deleted in new
chr15	79668341	79668816	chr15:79668341-79668816	7	-	79668341	79668341	16724991	1	475,	0,
#Deleted in new
chr15	79743310	79743468	chr15:79743310-79743468	7	+	79743310	79743310	16724991	1	158,	0,
#Partially deleted in new
chr15	79751688	79752049	chr15:79751688-79752049	7	-	79751688	79751688	16724991	1	361,	0,
#Deleted in new
chr15	79758548	79758762	chr15:79758548-79758762	7	-	79758548	79758548	16724991	1	214,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	79817348	79817450	chr15:79817348-79817450	3	-	79817348	79817348	8553170	1	102,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	79832465	79833554	chr15:79832465-79833554	3	-	79832465	79832465	8553170	2	510,29,	0,1060,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	79833584	79845327	chr15:79833584-79845327	0	-	79845209	79845327	789624	4	69,229,127,170,	0,5896,7625,11573,
#Deleted in new
chr15	79843546	79844304	chr15:79843546-79844304	3	-	79843546	79843546	8553170	1	758,	0,
#Partially deleted in new
chr15	79844975	79897049	chr15:79844975-79897049	3	-	79845209	79896988	0	3	467,262,178,	0,44117,51896,
#Partially deleted in new
chr15	79844975	79897379	chr15:79844975-79897379	1	-	79845209	79897364	789624	3	467,262,219,	0,44117,52185,
#Partially deleted in new
chr15	79845375	79923754	chr15:79845375-79923754	0	-	79845375	79923490	789624	3	67,262,303,	0,43717,78076,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	79875919	79878179	chr15:79875919-79878179	3	-	79875919	79875919	8553170	1	2260,	0,
#Partially deleted in new
chr15	79889091	79896997	chr15:79889091-79896997	0	-	79896853	79896988	789624	2	263,207,	0,7699,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	79898839	79908036	chr15:79898839-79908036	1	-	79898930	79907673	789624	2	286,408,	0,8789,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	79920194	79922455	chr15:79920194-79922455	3	-	79920194	79920194	8553170	1	2261,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	79922770	79926993	chr15:79922770-79926993	3	+	79922770	79922770	8553170	1	4223,	0,
#Deleted in new
chr15	79922770	79923260	chr15:79922770-79923260	0	+	79922770	79922770	8553170	1	490,	0,
#Partially deleted in new
chr15	79944497	79945578	chr15:79944497-79945578	7	+	79944497	79944497	16724991	1	1081,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	79960888	79971446	chr15:79960888-79971446	3	-	79961066	79971119	0	2	286,747,	0,9811,
#Partially deleted in new
chr15	79960891	79971169	chr15:79960891-79971169	1	-	79961158	79971119	0	3	283,56,470,	0,6745,9808,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	79984150	79985724	chr15:79984150-79985724	7	+	79984150	79984150	16724991	3	482,225,241,	0,806,1333,
#Deleted in new
chr15	79989904	79990606	chr15:79989904-79990606	7	+	79989904	79989904	16724991	2	475,226,	0,476,
#Deleted in new
chr15	79989904	79990606	chr15:79989904-79990606	0	+	79989904	79989904	8553170	1	702,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	80014156	80015707	chr15:80014156-80015707	3	+	80014156	80014156	8553170	1	1551,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	80057424	80057684	chr15:80057424-80057684	3	-	80057424	80057424	8553170	1	260,	0,
#Partially deleted in new
chr15	80059567	80138393	chr15:80059567-80138393	3	+	80120344	80137628	789624	7	242,163,171,109,101,114,914,	0,38848,60760,62144,63132,71612,77912,
#Partially deleted in new
chr15	80059567	80138392	chr15:80059567-80138392	1	+	80120344	80137628	789624	7	242,79,171,109,101,114,913,	0,15596,60760,62144,63132,71612,77912,
#Partially deleted in new
chr15	80059612	80137678	chr15:80059612-80137678	1	+	80120344	80137628	789624	6	197,171,109,101,114,199,	0,60715,62099,63087,71567,77867,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	80059634	80138360	chr15:80059634-80138360	1	+	80120344	80137628	789624	7	175,44,171,73,101,114,881,	0,55392,60693,62113,63065,71545,77845,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	80059675	80120404	chr15:80059675-80120404	0	+	80111499	80120404	789624	5	134,163,132,79,77,	0,38740,51752,53100,60652,
#Partially deleted in new
chr15	80059689	80137560	chr15:80059689-80137560	0	+	80120344	80137560	789624	5	120,171,109,101,81,	0,60638,62022,63010,77790,
#Partially deleted in new
chr15	80059713	80138360	chr15:80059713-80138360	1	+	80120344	80137628	789624	6	96,171,109,101,114,881,	0,60614,61998,62986,71466,77766,
#Partially deleted in new
chr15	80060159	80138392	chr15:80060159-80138392	1	+	80120344	80137628	789624	7	88,163,171,109,101,114,913,	0,38256,60168,61552,62540,71020,77320,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	80060423	80120405	chr15:80060423-80120405	0	+	80120344	80120405	789624	3	317,163,78,	0,37992,59904,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	80072563	80120440	chr15:80072563-80120440	0	+	80120344	80120440	789624	4	84,163,132,113,	0,25852,38864,47764,
#Partially deleted in new
chr15	80072577	80138360	chr15:80072577-80138360	1	+	80120344	80137628	789624	6	70,171,109,101,114,881,	0,47750,49134,50122,58602,64902,
#Partially deleted in new
chr15	80072582	80138358	chr15:80072582-80138358	1	+	80120344	80137628	789624	7	65,163,171,109,101,114,879,	0,25833,47745,49129,50117,58597,64897,
#Partially deleted in new
chr15	80072586	80131517	chr15:80072586-80131517	1	+	80120344	80131349	789624	5	61,171,109,101,338,	0,47741,49125,50113,58593,
#Partially deleted in new
chr15	80072587	80121820	chr15:80072587-80121820	0	+	80120344	80121820	789624	5	60,65,163,171,109,	0,678,25828,47740,49124,
#Partially deleted in new
chr15	80072587	80131233	chr15:80072587-80131233	0	+	80073299	80131233	789624	6	60,65,171,109,101,54,	0,678,47740,49124,50112,58592,
#Partially deleted in new
chr15	80072589	80121750	chr15:80072589-80121750	0	+	80120344	80121750	789624	5	58,152,163,171,39,	0,2574,25826,47738,49122,
#Partially deleted in new
chr15	80072589	80131241	chr15:80072589-80131241	0	+	80073299	80131241	789624	6	58,65,171,109,101,62,	0,676,47738,49122,50110,58590,
#Partially deleted in new
chr15	80072590	80120802	chr15:80072590-80120802	0	+	80072590	80072590	8553170	2	57,475,	0,47737,
#Partially deleted in new
chr15	80075160	80137811	chr15:80075160-80137811	1	+	80120344	80137628	789624	6	82,171,109,101,114,332,	0,45167,46551,47539,56019,62319,
#Partially deleted in new
chr15	80075160	80131294	chr15:80075160-80131294	0	+	80120344	80131294	789624	6	82,163,171,109,101,115,	0,23255,45167,46551,47539,56019,
#Partially deleted in new
chr15	80075160	80138392	chr15:80075160-80138392	1	+	80120344	80137628	789624	7	82,163,171,109,101,114,913,	0,23255,45167,46551,47539,56019,62319,
#Partially deleted in new
chr15	80075190	80131294	chr15:80075190-80131294	0	+	80075287	80131294	789624	5	125,171,109,101,115,	0,45137,46521,47509,55989,
#Deleted in new
chr15	80121718	80123067	chr15:80121718-80123067	0	+	80121718	80121718	8553170	2	102,368,	0,981,
#Partially deleted in new
chr15	80129599	80138379	chr15:80129599-80138379	0	+	80129599	80129599	8553170	2	1694,900,	0,7880,
#Partially deleted in new
chr15	80152489	80168079	chr15:80152489-80168079	0	+	80153054	80168079	789624	7	56,110,111,122,50,91,28,	0,536,5570,7266,7920,9756,15562,
#Partially deleted in new
chr15	80152779	80186946	chr15:80152779-80186946	3	+	80153054	80186209	789624	15	126,110,111,122,50,91,98,53,100,131,76,47,102,118,817,	0,246,5280,6976,7630,9466,15272,15484,19369,20234,22236,24757,27344,28262,33350,
#Partially deleted in new
chr15	80152788	80163131	chr15:80152788-80163131	0	+	80152788	80152788	8553170	6	53,110,111,122,114,886,	0,237,5271,6967,7621,9457,
#Partially deleted in new
chr15	80152793	80186343	chr15:80152793-80186343	1	+	80153054	80186209	789624	15	48,110,111,122,50,91,98,53,100,131,76,47,102,118,214,	0,232,5266,6962,7616,9452,15258,15470,19355,20220,22222,24743,27330,28248,33336,
#Partially deleted in new
chr15	80152793	80163707	chr15:80152793-80163707	0	+	80152793	80152793	8553170	5	342,111,122,50,1462,	0,5266,6962,7616,9452,
#Partially deleted in new
chr15	80152854	80162483	chr15:80152854-80162483	0	+	80152854	80152854	8553170	6	51,110,111,122,114,238,	0,171,5205,6901,7555,9391,
#Partially deleted in new
chr15	80152896	80186340	chr15:80152896-80186340	1	+	80153054	80186209	789624	14	239,111,122,50,91,98,53,100,131,76,47,102,118,211,	0,5163,6859,7513,9349,15155,15367,19252,20117,22119,24640,27227,28145,33233,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr15	80155950	80186348	chr15:80155950-80186348	0	+	80155950	80155950	8553170	13	2220,122,50,91,98,53,100,131,76,47,102,118,219,	0,3805,4459,6295,12101,12313,16198,17063,19065,21586,24173,25091,30179,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr15	80156491	80186351	chr15:80156491-80186351	0	+	80156491	80156491	8553170	14	1679,122,50,91,140,98,53,87,131,76,47,102,118,222,	0,3264,3918,5754,10611,11560,11772,15670,16522,18524,21045,23632,24550,29638,
#Partially deleted in new
chr15	80160057	80175092	chr15:80160057-80175092	0	+	80160057	80160057	8553170	8	242,50,91,98,53,100,131,77,	0,352,2188,7994,8206,12091,12956,14958,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	80165922	80166980	chr15:80165922-80166980	3	+	80165922	80165922	8553170	2	474,82,	0,976,
#Deleted in new
chr15	80168050	80168419	chr15:80168050-80168419	0	+	80168050	80168050	8553170	2	99,156,	0,213,
#Partially deleted in new
chr15	80172206	80173753	chr15:80172206-80173753	0	+	80172206	80172206	8553170	2	42,740,	0,807,
#Partially deleted in new
chr15	80175080	80181100	chr15:80175080-80181100	0	+	80175080	80180246	789624	4	11,47,207,59,	0,2456,5043,5961,
#Partially deleted in new
chr15	80177406	80186351	chr15:80177406-80186351	0	+	80177406	80177406	8553170	4	177,102,118,222,	0,2717,3635,8723,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	80195483	80252213	chr15:80195483-80252213	3	-	80201769	80201949	789624	3	6531,152,207,	0,8105,56523,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	80263067	80341768	chr15:80263067-80341768	3	-	80263067	80263067	789624	3	2626,39,213,	0,24747,78488,
#Partially deleted in new
chr15	80280130	80341805	chr15:80280130-80341805	0	-	80280130	80280130	8553170	3	143,39,250,	0,7684,61425,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	80320712	80341777	chr15:80320712-80341777	1	-	80320712	80320712	8553170	2	639,222,	0,20843,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	80320998	80341767	chr15:80320998-80341767	0	-	80320998	80320998	8553170	2	357,212,	0,20557,
#Deleted in new
chr15	80339206	80341773	chr15:80339206-80341773	1	-	80339206	80339206	8553170	3	141,108,218,	0,1099,2349,
#Partially deleted in new
chr15	80344852	80398007	chr15:80344852-80398007	0	-	80344852	80344852	8553170	3	275,97,64,	0,2835,53091,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	80373412	80403575	chr15:80373412-80403575	3	-	80373412	80373412	8553170	3	6741,63,74,	0,24531,30089,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	80404349	80475580	chr15:80404349-80475580	0	+	80404349	80404349	8553170	5	197,115,48,214,571,	0,46530,53579,65868,70660,
#Partially deleted in new
chr15	80404350	80597937	chr15:80404350-80597937	3	+	80404515	80593698	789624	19	196,115,48,214,214,103,66,86,77,135,75,152,73,124,100,139,166,137,4338,	0,46529,53578,65867,70659,103805,109560,109969,146848,148289,150714,158737,169797,170636,172515,176060,176888,187217,189249,
#Partially deleted in new
chr15	80404400	80597928	chr15:80404400-80597928	1	+	80404515	80597262	789624	20	146,115,48,214,214,103,66,86,77,135,75,152,73,124,100,139,166,137,28,734,	0,46479,53528,65817,70609,103755,109510,109919,146798,148239,150664,158687,169747,170586,172465,176010,176838,187167,189199,192794,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	80433794	80445152	chr15:80433794-80445152	3	-	80433794	80433794	8553170	3	724,301,866,	0,2292,10492,
#Deleted in new
chr15	80436159	80437186	chr15:80436159-80437186	0	-	80436159	80436159	8553170	2	228,314,	0,713,
#Partially deleted in new
chr15	80441230	80597928	chr15:80441230-80597928	1	+	80450881	80593698	789624	20	148,189,115,48,214,214,103,66,86,77,135,75,152,73,124,100,139,166,137,4329,	0,1606,9649,16698,28987,33779,66925,72680,73089,109968,111409,113834,121857,132917,133756,135635,139180,140008,150337,152369,
#Partially deleted in new
chr15	80441238	80593893	chr15:80441238-80593893	1	+	80450881	80593698	789624	19	140,115,48,214,214,103,66,86,77,135,75,152,73,124,100,139,166,137,294,	0,9641,16690,28979,33771,66917,72672,73081,109960,111401,113826,121849,132909,133748,135627,139172,140000,150329,152361,
#Partially deleted in new
chr15	80441239	80552753	chr15:80441239-80552753	0	+	80508211	80552753	789624	6	139,103,66,86,77,114,	0,66916,72671,73080,109959,111400,
#Partially deleted in new
chr15	80470242	80488735	chr15:80470242-80488735	0	+	80470242	80470242	8553170	4	189,214,141,170,	0,4767,17491,18323,
#Partially deleted in new
chr15	80551103	80574184	chr15:80551103-80574184	0	+	80551103	80551103	8553170	5	172,135,75,152,37,	0,1536,3961,11984,23044,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	80554608	80562944	chr15:80554608-80562944	3	-	80554608	80554608	789624	3	2325,112,83,	0,5447,8253,
#Partially deleted in new
chr15	80574065	80581305	chr15:80574065-80581305	0	+	80574065	80574065	8553170	5	155,124,100,139,67,	0,921,2800,6345,7173,
#Deleted in new
chr15	80580028	80580566	chr15:80580028-80580566	3	-	80580028	80580028	8553170	1	538,	0,
#Deleted in new
chr15	80581102	80581239	chr15:80581102-80581239	3	+	80581102	80581102	5263520	1	137,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	80663771	80663878	chr15:80663771-80663878	3	+	80663771	80663771	8553170	1	107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	80679683	80754519	chr15:80679683-80754519	1	+	80749627	80754370	789624	3	78,180,369,	0,69829,74467,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	80693215	80693707	chr15:80693215-80693707	3	-	80693215	80693215	8553170	1	492,	0,
#Partially deleted in new
chr15	80695302	80755621	chr15:80695302-80755621	3	+	80695429	80754370	789624	3	717,180,1471,	0,54210,58848,
#Partially deleted in new
chr15	80695310	80755339	chr15:80695310-80755339	1	+	80695429	80754370	789624	3	709,78,1189,	0,54202,58840,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	80702682	80755619	chr15:80702682-80755619	0	+	80702682	80702682	8553170	3	786,180,1469,	0,46830,51468,
#Partially deleted in new
chr15	80704583	80754197	chr15:80704583-80754197	0	+	80704583	80704583	8553170	4	262,133,180,47,	0,396,44929,49567,
#Partially deleted in new
chr15	80779342	80951776	chr15:80779342-80951776	3	+	80873879	80948924	789624	29	272,110,147,139,237,180,71,96,122,133,192,176,210,206,70,129,86,132,36,156,181,216,212,186,205,87,158,101,2980,	0,94521,99378,100373,101557,104832,108351,109358,110128,115647,116526,127320,129754,140751,141689,142666,145278,146281,149559,149676,152516,153902,157331,158451,162506,162908,163602,167622,169454,
#Partially deleted in new
chr15	80779370	80951776	chr15:80779370-80951776	1	+	80873879	80948924	789624	30	244,99,110,147,139,237,180,71,96,122,133,192,176,210,206,70,129,86,132,36,156,181,216,212,186,205,87,158,101,2980,	0,94167,94493,99350,100345,101529,104804,108323,109330,110100,115619,116498,127292,129726,140723,141661,142638,145250,146253,149531,149648,152488,153874,157303,158423,162478,162880,163574,167594,169426,
#Partially deleted in new
chr15	80779370	80951776	chr15:80779370-80951776	1	+	80873879	80948924	789624	30	244,159,110,147,139,237,180,71,96,122,133,192,176,210,206,70,129,86,132,36,156,181,216,212,186,205,87,158,101,2980,	0,94167,94493,99350,100345,101529,104804,108323,109330,110100,115619,116498,127292,129726,140723,141661,142638,145250,146253,149531,149648,152488,153874,157303,158423,162478,162880,163574,167594,169426,
#Deleted in new
chr15	80841977	80842073	chr15:80841977-80842073	3	-	80841977	80841977	5263520	1	96,	0,
#Partially deleted in new
chr15	80896189	80948867	chr15:80896189-80948867	3	-	80896189	80896189	8553170	4	172,86,253,172,	0,1064,13310,52506,
#Partially deleted in new
chr15	80896190	80909777	chr15:80896190-80909777	0	-	80896190	80896190	8553170	3	171,86,278,	0,1063,13309,
#Partially deleted in new
chr15	80896197	80903169	chr15:80896197-80903169	0	-	80896197	80896197	8553170	4	164,86,136,73,	0,1056,4632,6899,
#Partially deleted in new
chr15	80896206	80909760	chr15:80896206-80909760	3	-	80896206	80896206	8553170	4	155,86,136,261,	0,1047,4623,13293,
#Partially deleted in new
chr15	80933425	80938194	chr15:80933425-80938194	0	+	80933425	80937983	789624	3	35,212,401,	0,3248,4368,
#Partially deleted in new
chr15	80936870	80943041	chr15:80936870-80943041	0	+	80936870	80942278	789624	4	15,186,87,97,	0,923,5380,6074,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	80946288	80989828	chr15:80946288-80989828	0	-	80979218	80989791	789624	5	2610,338,547,233,250,	0,5670,32642,35661,43290,
#Deleted in new
chr15	80946943	80949162	chr15:80946943-80949162	0	+	80946943	80946943	8553170	2	122,366,	0,1853,
#Partially deleted in new
chr15	80947328	80989828	chr15:80947328-80989828	3	-	80979218	80989791	789624	5	1570,338,547,233,250,	0,4630,31602,34621,42250,
#Partially deleted in new
chr15	80948085	80989819	chr15:80948085-80989819	0	-	80952092	80989791	789624	3	813,338,241,	0,3873,41493,
#Partially deleted in new
chr15	80948501	80978813	chr15:80948501-80978813	0	-	80948501	80948501	8553170	4	397,338,198,48,	0,3457,21960,30264,
#Partially deleted in new
chr15	80948675	80979140	chr15:80948675-80979140	0	-	80948675	80948675	8553170	3	223,338,375,	0,3283,30090,
#Partially deleted in new
chr15	80952074	80989795	chr15:80952074-80989795	0	-	80953006	80989791	789624	3	222,100,217,	0,862,37504,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	80975746	80989878	chr15:80975746-80989878	1	-	80979218	80989791	789624	3	3731,233,300,	0,6203,13832,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	80990803	80993258	chr15:80990803-80993258	3	-	80990803	80990803	8553170	1	2455,	0,
#Deleted in new
chr15	80997416	80997473	chr15:80997416-80997473	3	-	80997416	80997416	5263520	1	57,	0,
#Deleted in new
chr15	80999592	80999981	chr15:80999592-80999981	3	-	80999592	80999592	8553170	1	389,	0,
#Deleted in new
chr15	81000943	81005788	chr15:81000943-81005788	3	+	81002271	81003360	789624	1	4845,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	81007032	81138067	chr15:81007032-81138067	0	+	81135275	81138067	789624	5	99,135,90,233,17,	0,120557,128237,129483,131018,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	81060952	81063488	chr15:81060952-81063488	3	+	81060952	81060952	8553170	1	2536,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	81099407	81136748	chr15:81099407-81136748	0	+	81135275	81136748	789624	4	114,135,90,233,	0,28182,35862,37108,
#Partially deleted in new
chr15	81117634	81118340	chr15:81117634-81118340	7	-	81117634	81117634	16724991	1	706,	0,
#Partially deleted in new
chr15	81134246	81149175	chr15:81134246-81149175	3	+	81134329	81148533	789624	7	152,90,233,85,159,74,838,	0,1023,2269,3804,9415,13611,14091,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	81159574	81182883	chr15:81159574-81182883	0	+	81159574	81159574	8553170	2	426,119,	0,23190,
#Partially deleted in new
chr15	81182599	81292940	chr15:81182599-81292940	0	+	81225399	81289936	789624	13	297,413,109,143,111,115,74,217,118,133,142,88,1017,	0,42699,77172,83059,86938,90490,96217,96958,100039,103098,107304,107853,109324,
#Partially deleted in new
chr15	81182859	81309098	chr15:81182859-81309098	0	+	81225399	81291958	789624	20	37,51,413,109,143,111,115,74,217,118,133,88,1114,151,1096,169,102,259,126,494,	0,5493,42439,76912,82799,86678,90230,95957,96698,99779,102838,107593,109064,114068,116520,118484,120689,123048,123560,125745,
#Partially deleted in new
chr15	81196877	81292917	chr15:81196877-81292917	0	+	81225399	81292917	789624	12	275,413,109,143,111,115,74,217,118,133,88,362,	0,28421,62894,68781,72660,76212,81939,82680,85761,88820,93575,95678,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr15	81196878	81314058	chr15:81196878-81314058	1	+	81225399	81308798	0	19	259,413,109,143,111,115,74,217,118,133,88,482,151,1096,169,102,259,123,5454,	0,28420,62893,68780,72659,76211,81938,82679,85760,88819,93574,95677,100049,102501,104465,106670,109029,109544,111726,
#Partially deleted in new
chr15	81225399	81308798	chr15:81225399-81308798	3	+	81225399	81308798	0	18	312,109,143,111,115,74,217,118,133,88,482,151,1096,169,102,259,126,194,	0,34372,40259,44138,47690,53417,54158,57239,60298,65053,67156,71528,73980,75944,78149,80508,81020,83205,
#Partially deleted in new
chr15	81278877	81306548	chr15:81278877-81306548	0	+	81278877	81291958	789624	13	13,217,118,133,88,1114,189,151,1096,169,102,259,126,	0,680,3761,6820,11575,13046,16454,18050,20502,22466,24671,27030,27545,
#Partially deleted in new
chr15	81296912	81309083	chr15:81296912-81309083	1	+	81299429	81308798	0	7	166,1096,169,102,259,126,479,	0,2467,4431,6636,8995,9507,11692,
#Deleted in new
chr15	81296969	81300060	chr15:81296969-81300060	0	+	81296969	81296969	8553170	2	109,517,	0,2574,
#Partially deleted in new
chr15	81296987	81306548	chr15:81296987-81306548	0	+	81296987	81299347	789624	6	91,1172,169,102,259,129,	0,2316,4356,6561,8920,9432,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	81299415	81306852	chr15:81299415-81306852	0	+	81299415	81306667	789624	5	1060,169,102,259,430,	0,1928,4133,6492,7007,
#Partially deleted in new
chr15	81302086	81306457	chr15:81302086-81306457	0	+	81302086	81302086	8553170	4	162,102,259,38,	0,1462,3821,4333,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	81303214	81309391	chr15:81303214-81309391	3	-	81303214	81303214	8553170	2	415,61,	0,6116,
#Deleted in new
chr15	81305745	81306526	chr15:81305745-81306526	0	+	81305745	81305745	8553170	2	421,104,	0,677,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	81309052	81324125	chr15:81309052-81324125	3	-	81313255	81324099	0	6	4351,94,118,133,50,125,	0,9356,10286,13355,13846,14948,
#Deleted in new
chr15	81309355	81310139	chr15:81309355-81310139	0	-	81309355	81309355	8553170	2	178,369,	0,415,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	81312666	81324141	chr15:81312666-81324141	0	-	81312666	81312666	8553170	4	737,94,118,1734,	0,5742,6672,9741,
#Partially deleted in new
chr15	81312667	81324183	chr15:81312667-81324183	0	-	81322447	81324099	0	5	736,94,118,133,183,	0,5741,6671,9740,11333,
#Partially deleted in new
chr15	81319350	81324141	chr15:81319350-81324141	0	-	81322505	81324099	789624	3	106,133,340,	0,3057,4451,
#Partially deleted in new
chr15	81319399	81324141	chr15:81319399-81324141	0	-	81319399	81319399	8553170	4	57,133,50,340,	0,3008,3499,4402,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	81324376	81423883	chr15:81324376-81423883	1	+	81324376	81324376	8553170	8	185,197,147,168,118,46,199,1135,	0,7968,17185,33959,37542,55832,94607,98372,
#Partially deleted in new
chr15	81324437	81341710	chr15:81324437-81341710	0	+	81324437	81324437	8553170	2	124,149,	0,17124,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr15	81331216	81374213	chr15:81331216-81374213	3	-	81332418	81374077	789624	22	2046,256,43,79,126,111,129,68,129,246,79,110,148,44,148,143,99,107,82,76,147,225,	0,3503,5392,6629,7438,8177,10173,12061,12700,13549,15148,18241,20477,24508,25230,26932,27185,28148,31003,37036,41374,42772,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr15	81331216	81374213	chr15:81331216-81374213	1	-	81332418	81374077	789624	22	2046,256,43,79,126,111,129,68,129,246,79,113,148,44,148,143,99,107,82,76,147,225,	0,3503,5392,6629,7438,8177,10173,12061,12700,13549,15148,18241,20477,24508,25230,26932,27185,28148,31003,37036,41374,42772,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	81331910	81516976	chr15:81331910-81516976	0	+	81331910	81331910	8553170	7	113,197,147,168,118,52,474,	0,434,9651,26425,30008,48298,184592,
#Deleted in new
chr15	81335576	81336119	chr15:81335576-81336119	3	+	81335576	81335576	8553170	1	543,	0,
#Partially deleted in new
chr15	81337641	81374156	chr15:81337641-81374156	0	-	81337641	81337641	8553170	19	283,126,111,129,68,129,246,79,113,148,44,148,143,99,107,82,76,147,168,	0,1013,1752,3748,5636,6275,7124,8723,11816,14052,18083,18805,20507,20760,21723,24578,30611,34949,36347,
#Deleted in new
chr15	81341647	81343150	chr15:81341647-81343150	0	+	81341647	81341647	8553170	2	61,418,	0,1085,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	81361948	81395536	chr15:81361948-81395536	1	+	81361948	81361948	8553170	4	88,52,127,2459,	0,18260,26916,31129,
#Deleted in new
chr15	81385389	81385774	chr15:81385389-81385774	7	+	81385389	81385389	16724991	1	385,	0,
#Deleted in new
chr15	81403025	81403570	chr15:81403025-81403570	3	+	81403025	81403025	8553170	1	545,	0,
#Deleted in new
chr15	81410516	81411267	chr15:81410516-81411267	0	+	81410516	81410516	8553170	2	86,572,	0,179,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	81410604	81518200	chr15:81410604-81518200	3	+	81410604	81410604	8553170	3	146,199,1698,	0,8379,105898,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	81427447	81755217	chr15:81427447-81755217	3	+	81427447	81427447	8553170	4	98,168,160,138,	0,182561,326132,327632,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	81554002	81696780	chr15:81554002-81696780	3	+	81554002	81554002	8553170	3	28,115,375,	0,114165,142403,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	81633886	81642190	chr15:81633886-81642190	3	-	81633886	81633886	8553170	2	294,182,	0,8122,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	81660481	81798124	chr15:81660481-81798124	1	-	81660481	81660481	8553170	3	229,139,201,	0,1518,137442,
#Partially deleted in new
chr15	82010211	82010607	chr15:82010211-82010607	7	-	82010211	82010211	16724991	1	396,	0,
#Deleted in new
chr15	82041777	82046141	chr15:82041777-82046141	3	-	82043159	82045705	789624	2	2836,692,	0,3672,
#Deleted in new
chr15	82041786	82046119	chr15:82041786-82046119	1	-	82045228	82045705	789624	1	4333,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	82088593	82097694	chr15:82088593-82097694	3	+	82088593	82088593	789624	6	135,878,101,252,955,247,	0,3133,4800,5389,6888,8854,
#Partially deleted in new
chr15	82088632	82095707	chr15:82088632-82095707	0	+	82088632	82088632	8553170	3	96,209,226,	0,3094,6849,
#Partially deleted in new
chr15	82088690	82091980	chr15:82088690-82091980	0	+	82088690	82088690	8553170	2	38,254,	0,3036,
#Partially deleted in new
chr15	82130229	82262763	chr15:82130229-82262763	3	-	82130372	82261778	0	20	332,185,959,148,132,139,167,152,100,123,137,77,124,215,138,134,85,68,110,150,	0,8428,21235,27483,33623,84487,89422,89848,94935,97220,97961,98804,100618,108077,110188,111040,122461,128858,131458,132384,
#Partially deleted in new
chr15	82130232	82262714	chr15:82130232-82262714	1	-	82130372	82261778	0	18	329,185,959,148,132,139,167,152,100,123,137,77,124,215,138,134,110,101,	0,8425,21232,27480,33620,84484,89419,89845,94932,97217,97958,98801,100615,108074,110185,111037,131455,132381,
#Partially deleted in new
chr15	82130240	82262638	chr15:82130240-82262638	0	-	82227547	82261778	8553170	20	321,185,959,148,132,139,167,152,100,130,137,77,124,215,138,134,85,68,110,25,	0,8417,21224,27472,33612,84476,89411,89837,94924,97209,97950,98793,100607,108066,110177,111029,122450,128847,131447,132373,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	82152156	82160070	chr15:82152156-82160070	0	-	82152156	82152156	8553170	3	267,148,139,	0,5556,7775,
#Partially deleted in new
chr15	82157465	82163957	chr15:82157465-82163957	0	-	82157465	82157465	8553170	2	395,105,	0,6387,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	82174223	82174385	chr15:82174223-82174385	3	-	82174223	82174223	8553170	1	162,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	82180742	82182700	chr15:82180742-82182700	3	+	82180742	82180742	8553170	2	250,678,	0,1280,
#Partially deleted in new
chr15	82214782	82215663	chr15:82214782-82215663	0	-	82214782	82214782	8553170	2	73,81,	0,800,
#Partially deleted in new
chr15	82227465	82233774	chr15:82227465-82233774	0	-	82227465	82227465	8553170	5	107,137,77,124,112,	0,725,1568,3382,6197,
#Partially deleted in new
chr15	82238307	82252759	chr15:82238307-82252759	0	-	82238307	82252759	789624	3	214,134,69,	0,2962,14383,
#Partially deleted in new
chr15	82238453	82262734	chr15:82238453-82262734	0	-	82241385	82261778	789624	6	68,138,134,68,110,121,	0,1964,2816,20634,23234,24160,
#Deleted in new
chr15	82261687	82262661	chr15:82261687-82262661	0	-	82261687	82261778	789624	3	110,363,48,	0,298,926,
#Deleted in new
chr15	82261728	82262464	chr15:82261728-82262464	0	-	82261728	82261778	789624	2	63,479,	0,257,
#Partially deleted in new
chr15	82262809	82264889	chr15:82262809-82264889	1	+	82262879	82264709	789624	2	123,217,	0,1863,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	82262810	82284930	chr15:82262810-82284930	3	+	82262879	82283062	789624	3	122,200,2812,	0,8792,19308,
#Partially deleted in new
chr15	82262817	82265748	chr15:82262817-82265748	0	+	82265656	82265748	789624	2	371,180,	0,2751,
#Partially deleted in new
chr15	82262825	82264889	chr15:82262825-82264889	1	+	82262879	82263431	789624	3	107,80,217,	0,533,1847,
#Partially deleted in new
chr15	82262826	82264881	chr15:82262826-82264881	0	+	82262826	82262826	8553170	4	106,50,80,209,	0,312,532,1846,
#Partially deleted in new
chr15	82262843	82272094	chr15:82262843-82272094	1	+	82265656	82271825	789624	4	89,50,180,492,	0,295,2725,8759,
#Partially deleted in new
chr15	82262844	82283579	chr15:82262844-82283579	0	+	82262844	82262844	8553170	3	344,200,1461,	0,8758,19274,
#Partially deleted in new
chr15	82263143	82264889	chr15:82263143-82264889	0	+	82263143	82263143	8553170	2	45,217,	0,1529,
#Partially deleted in new
chr15	82298552	82334609	chr15:82298552-82334609	7	+	82298552	82298552	16724991	20	351,166,84,125,256,93,146,170,134,122,245,142,127,214,1410,153,174,147,168,366,	0,2447,5768,6197,17706,18563,19052,20585,21081,22155,23531,24057,27143,27737,28278,30623,31210,31464,32770,35691,
#Partially deleted in new
chr15	82298662	82305814	chr15:82298662-82305814	4	+	82298662	82298662	16724991	4	241,166,84,82,	0,2337,5658,7070,
#Partially deleted in new
chr15	82298855	82304859	chr15:82298855-82304859	4	+	82298855	82298855	16724991	4	48,166,84,110,	0,2144,5465,5894,
#Partially deleted in new
chr15	82339997	82349475	chr15:82339997-82349475	1	-	82342775	82349375	789624	11	2911,103,61,387,66,245,88,81,60,120,184,	0,3120,4263,4590,5016,5184,5811,6563,6829,7512,9294,
#Partially deleted in new
chr15	82339997	82349437	chr15:82339997-82349437	1	-	82342775	82349375	789624	10	2911,103,61,316,274,88,81,60,120,146,	0,3120,4263,4590,5155,5811,6563,6829,7512,9294,
#Partially deleted in new
chr15	82342739	82349475	chr15:82342739-82349475	3	-	82342775	82349375	789624	9	169,103,61,839,88,81,60,120,184,	0,378,1521,1848,3069,3821,4087,4770,6552,
#Deleted in new
chr15	82347241	82349437	chr15:82347241-82349437	0	-	82347241	82347241	8553170	2	388,146,	0,2050,
#Partially deleted in new
chr15	82355141	82414738	chr15:82355141-82414738	7	+	82355141	82355141	16724991	5	233,57,140,80,138,	0,45518,49470,53146,59459,
#Deleted in new
chr15	82372195	82372912	chr15:82372195-82372912	7	-	82372195	82372195	16724991	2	221,415,	0,302,
#Deleted in new
chr15	82372309	82372888	chr15:82372309-82372888	5	-	82372309	82372309	16724991	1	579,	0,
#Partially deleted in new
chr15	82391843	82420075	chr15:82391843-82420075	5	+	82391843	82391843	16724991	8	110,57,140,175,80,63,40,96,	0,8816,12768,15287,16444,20818,27364,28136,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	82414680	82416003	chr15:82414680-82416003	4	+	82414680	82414680	16724991	2	124,476,	0,847,
#Partially deleted in new
chr15	82414786	82419391	chr15:82414786-82419391	4	+	82414786	82414786	16724991	5	18,148,157,40,24,	0,741,3849,4421,4581,
#Partially deleted in new
chr15	82418650	82434235	chr15:82418650-82434235	3	+	82418650	82418650	8553170	7	142,96,120,56,81,88,202,	0,1329,13179,13925,14166,14911,15383,
#Deleted in new
chr15	82430017	82432217	chr15:82430017-82432217	0	+	82430017	82430017	8553170	2	146,388,	0,1812,
#Partially deleted in new
chr15	82430019	82436762	chr15:82430019-82436762	3	+	82430079	82436411	789624	9	144,120,60,81,88,569,61,103,484,	0,1810,2552,2797,3542,4014,4849,5947,6259,
#Partially deleted in new
chr15	82430044	82439153	chr15:82430044-82439153	0	+	82430044	82430044	8553170	6	2853,88,569,61,103,2875,	0,3517,3989,4824,5922,6234,
#Partially deleted in new
chr15	82445718	82454712	chr15:82445718-82454712	5	+	82445718	82445718	16724991	2	33,120,	0,8874,
#Partially deleted in new
chr15	82445732	82454837	chr15:82445732-82454837	7	+	82445732	82445732	16724991	3	19,179,245,	0,923,8860,
#Partially deleted in new
chr15	82459471	82470008	chr15:82459471-82470008	5	+	82459471	82459471	16724991	7	164,3504,487,171,199,133,159,	0,1832,6916,8013,9802,10102,10378,
#Partially deleted in new
chr15	82464707	82477258	chr15:82464707-82477258	7	+	82464707	82464707	16724991	12	100,194,487,171,133,159,237,187,90,69,37,1547,	0,527,1680,2777,4866,5142,7501,8603,9388,9977,10335,11004,
#Partially deleted in new
chr15	82472202	82472426	chr15:82472202-82472426	7	+	82472202	82472202	16724991	1	224,	0,
#Partially deleted in new
chr15	82472992	82513950	chr15:82472992-82513950	7	-	82472992	82472992	16724991	7	489,138,155,91,102,89,285,	0,2485,3793,4040,4488,4845,40673,
#Partially deleted in new
chr15	82473419	82513844	chr15:82473419-82513844	4	-	82473419	82473419	16724991	8	31,138,155,91,96,189,89,129,	0,2058,3366,3613,3783,3974,4418,40296,
#Partially deleted in new
chr15	82473784	82513950	chr15:82473784-82513950	5	-	82473784	82473784	16724991	7	29,138,155,91,96,189,285,	0,1693,3001,3248,3418,3609,39881,
#Partially deleted in new
chr15	82476497	82477926	chr15:82476497-82477926	5	-	82476497	82476497	16724991	6	197,155,91,96,189,89,	0,288,535,705,896,1340,
#Partially deleted in new
chr15	82476898	82513874	chr15:82476898-82513874	4	-	82476898	82476898	16724991	5	42,91,189,89,159,	0,134,495,939,36817,
#Partially deleted in new
chr15	82477092	82513904	chr15:82477092-82513904	4	-	82477092	82477092	16724991	3	31,189,239,	0,301,36573,
#Deleted in new
chr15	82519589	82523693	chr15:82519589-82523693	5	+	82519589	82519589	16724991	6	148,120,60,81,88,89,	0,1814,2555,2800,3545,4015,
#Partially deleted in new
chr15	82519653	82526412	chr15:82519653-82526412	7	+	82519653	82519653	16724991	7	84,120,60,81,88,869,96,	0,1750,2491,2736,3481,4098,6663,
#Partially deleted in new
chr15	82531652	82534139	chr15:82531652-82534139	7	-	82531652	82531652	16724991	3	60,261,112,	0,1373,2375,
#Partially deleted in new
chr15	82533174	82540008	chr15:82533174-82540008	3	-	82533174	82533174	8553170	4	112,66,106,28,	0,5131,5705,6806,
#Partially deleted in new
chr15	82536749	82540564	chr15:82536749-82540564	3	-	82536800	82540428	0	5	132,66,106,152,139,	0,1556,2130,3231,3676,
#Partially deleted in new
chr15	82536749	82540457	chr15:82536749-82540457	1	-	82536800	82540428	789624	5	132,66,106,152,32,	0,1556,2130,3231,3676,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	82536754	82540459	chr15:82536754-82540459	1	-	82538221	82540428	789624	4	1617,106,152,34,	0,2125,3226,3671,
#Partially deleted in new
chr15	82536755	82540437	chr15:82536755-82540437	0	-	82536755	82540428	789624	6	126,121,66,106,152,12,	0,1166,1550,2124,3225,3670,
#Partially deleted in new
chr15	82536758	82540131	chr15:82536758-82540131	0	-	82539347	82540131	789624	5	123,66,106,76,151,	0,1547,2121,2541,3222,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	82536762	82540142	chr15:82536762-82540142	0	-	82536762	82536762	8553170	3	1609,106,162,	0,2117,3218,
#Partially deleted in new
chr15	82536787	82571741	chr15:82536787-82571741	3	-	82536800	82571497	789624	13	94,66,106,152,81,95,199,137,90,114,253,227,398,	0,1518,2092,3193,9653,10355,12672,15692,16679,17090,19082,20972,34556,
#Partially deleted in new
chr15	82536787	82573194	chr15:82536787-82573194	0	-	82553981	82573194	789624	13	94,66,106,152,81,95,199,137,90,114,253,189,199,	0,1518,2092,3193,9653,10355,12672,15692,16679,17090,19082,34556,36208,
#Partially deleted in new
chr15	82536808	82540452	chr15:82536808-82540452	0	-	82536808	82536808	8553170	4	73,680,152,27,	0,1497,3172,3617,
#Partially deleted in new
chr15	82538664	82540419	chr15:82538664-82540419	0	-	82538664	82538664	8553170	2	321,439,	0,1316,
#Partially deleted in new
chr15	82538886	82540457	chr15:82538886-82540457	0	-	82538886	82538886	8553170	2	99,477,	0,1094,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	82539583	82540456	chr15:82539583-82540456	0	-	82539583	82539583	8553170	2	549,31,	0,842,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	82540869	82562374	chr15:82540869-82562374	3	+	82540869	82540869	8553170	3	110,116,195,	0,7786,21310,
#Partially deleted in new
chr15	82543200	82556536	chr15:82543200-82556536	0	-	82543200	82543200	8553170	8	1502,81,95,199,137,90,114,667,	0,3240,3942,6259,9279,10266,10677,12669,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	82543202	82630185	chr15:82543202-82630185	1	-	82544591	82628459	789624	12	1500,81,95,199,137,90,114,253,227,189,175,1822,	0,3238,3940,6257,9277,10264,10675,12667,14557,28141,83990,85161,
#Partially deleted in new
chr15	82543833	82571823	chr15:82543833-82571823	3	-	82544591	82571497	789624	11	869,81,95,199,137,105,114,253,227,189,190,	0,2607,3309,5626,8646,9618,10044,12036,13926,27510,27800,
#Partially deleted in new
chr15	82544272	82647977	chr15:82544272-82647977	1	-	82544591	82647870	789624	12	430,81,95,199,137,90,114,253,227,189,175,122,	0,2168,2870,5187,8207,9194,9605,11597,13487,27071,82920,103583,
#Partially deleted in new
chr15	82544294	82571759	chr15:82544294-82571759	1	-	82544591	82571497	789624	11	408,81,95,199,137,90,114,253,227,189,126,	0,2146,2848,5165,8185,9172,9583,11575,13465,27049,27339,
#Partially deleted in new
chr15	82544294	82573211	chr15:82544294-82573211	1	-	82544591	82573194	789624	11	408,81,95,199,137,90,114,253,227,189,216,	0,2146,2848,5165,8185,9172,9583,11575,13465,27049,28701,
#Partially deleted in new
chr15	82544296	82571809	chr15:82544296-82571809	1	-	82544591	82571497	789624	10	406,81,95,199,137,90,114,253,227,466,	0,2144,2846,5163,8183,9170,9581,11573,13463,27047,
#Partially deleted in new
chr15	82544309	82647605	chr15:82544309-82647605	1	-	82544591	82571497	789624	12	393,81,95,199,137,90,114,253,227,189,175,469,	0,2131,2833,5150,8170,9157,9568,11560,13450,27034,82883,102827,
#Partially deleted in new
chr15	82544357	82647359	chr15:82544357-82647359	1	-	82544591	82571497	789624	13	345,81,95,199,137,90,114,253,227,189,92,175,223,	0,2083,2785,5102,8122,9109,9520,11512,13402,26986,39013,82835,102779,
#Partially deleted in new
chr15	82544452	82571784	chr15:82544452-82571784	0	-	82553981	82571497	789624	10	250,81,95,199,137,90,114,253,189,151,	0,1988,2690,5007,8027,9014,9425,11417,26891,27181,
#Partially deleted in new
chr15	82557521	82571447	chr15:82557521-82571447	0	-	82557521	82557521	8553170	2	465,104,	0,13822,
#Partially deleted in new
chr15	82557798	82572078	chr15:82557798-82572078	0	-	82557798	82571497	789624	3	188,189,177,	0,13545,14103,
#Partially deleted in new
chr15	82571390	82647123	chr15:82571390-82647123	0	-	82571390	82571497	789624	5	142,175,50,58,102,	0,55802,61781,70234,75631,
#Partially deleted in new
chr15	82571445	82647503	chr15:82571445-82647503	0	-	82571445	82571497	789624	3	87,175,295,	0,55747,75763,
#Partially deleted in new
chr15	82627288	82648861	chr15:82627288-82648861	0	-	82627288	82627288	8553170	2	79,423,	0,21150,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	82633181	82648378	chr15:82633181-82648378	0	-	82633181	82633181	8553170	5	40,70,209,58,159,	0,5383,7475,8443,15038,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	82647769	82692820	chr15:82647769-82692820	3	+	82647769	82647769	789624	4	1039,171,118,810,	0,2001,2259,44241,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	82650028	82653022	chr15:82650028-82653022	1	+	82650028	82650028	8553170	1	2994,	0,
#Partially deleted in new
chr15	82659280	82709914	chr15:82659280-82709914	3	-	82659559	82709706	789624	26	430,139,98,85,229,107,61,175,124,109,119,187,177,110,133,63,72,55,284,183,67,161,96,75,76,321,	0,564,2544,2887,3413,3846,4279,4520,5086,5554,6176,7466,17180,17993,18390,18824,20448,20894,21191,21556,21831,22139,29455,29877,30097,50313,
#Partially deleted in new
chr15	82659280	82699875	chr15:82659280-82699875	1	-	82659559	82699875	789624	26	430,139,98,85,229,107,61,175,124,109,119,187,177,110,133,63,72,55,284,183,67,161,96,75,76,242,	0,564,2544,2887,3413,3846,4279,4520,5086,5554,6176,7466,17180,17993,18390,18824,20448,20894,21191,21556,21831,22139,29455,29877,30097,40353,
#Partially deleted in new
chr15	82659281	82680407	chr15:82659281-82680407	0	-	82659281	82659281	8553170	18	429,139,98,85,229,107,61,175,124,109,119,187,177,110,133,63,72,233,	0,563,2543,2886,3412,3845,4278,4519,5085,5553,6175,7465,17179,17992,18389,18823,20447,20893,
#Partially deleted in new
chr15	82659281	82709908	chr15:82659281-82709908	1	-	82659559	82709706	789624	26	429,139,98,85,229,107,61,175,124,109,119,187,177,110,133,63,72,55,284,183,67,161,96,75,76,315,	0,563,2543,2886,3412,3845,4278,4519,5085,5553,6175,7465,17179,17992,18389,18823,20447,20893,21190,21555,21830,22138,29454,29876,30096,50312,
#Deleted in new
chr15	82659284	82662696	chr15:82659284-82662696	0	-	82659284	82659284	8553170	4	426,139,98,529,	0,560,2540,2883,
#Partially deleted in new
chr15	82659531	82709779	chr15:82659531-82709779	1	-	82659559	82709706	789624	25	179,139,98,85,229,107,61,175,124,109,119,187,177,110,133,63,72,55,284,183,67,161,75,76,186,	0,313,2293,2636,3162,3595,4028,4269,4835,5303,5925,7215,16929,17742,18139,18573,20197,20643,20940,21305,21580,21888,29626,29846,50062,
#Partially deleted in new
chr15	82659536	82709779	chr15:82659536-82709779	1	-	82659559	82709706	789624	27	174,139,98,85,229,107,61,175,124,109,57,119,187,177,110,133,63,72,55,284,183,67,161,96,75,76,186,	0,308,2288,2631,3157,3590,4023,4264,4830,5298,5710,5920,7210,16924,17737,18134,18568,20192,20638,20935,21300,21575,21883,29199,29621,29841,50057,
#Deleted in new
chr15	82662468	82663249	chr15:82662468-82663249	0	-	82662468	82662468	8553170	2	454,123,	0,658,
#Deleted in new
chr15	82662869	82663584	chr15:82662869-82663584	0	-	82663251	82663584	789624	3	53,169,25,	0,257,690,
#Deleted in new
chr15	82680731	82681601	chr15:82680731-82681601	0	-	82680731	82680731	8553170	4	24,183,67,182,	0,105,380,688,
#Partially deleted in new
chr15	82680896	82699240	chr15:82680896-82699240	0	-	82680896	82689434	789624	8	123,67,161,96,75,76,122,26,	0,215,523,7839,8261,8481,16960,18318,
#Partially deleted in new
chr15	82681509	82709883	chr15:82681509-82709883	0	-	82681509	82681509	8553170	4	71,497,76,290,	0,7226,7868,28084,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	82685090	82709859	chr15:82685090-82709859	1	-	82688432	82709706	789624	5	3408,96,75,76,266,	0,3645,4067,4287,24503,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	82686814	82708851	chr15:82686814-82708851	0	-	82686814	82686814	8553170	5	205,96,75,76,80,	0,1921,2343,2563,21957,
#Partially deleted in new
chr15	82688427	82709873	chr15:82688427-82709873	0	-	82688427	82688427	8553170	4	404,75,76,280,	0,730,950,21166,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	82689399	82709865	chr15:82689399-82709865	0	-	82689399	82689399	8553170	3	54,172,272,	0,363,20194,
#Deleted in new
chr15	82691722	82692358	chr15:82691722-82692358	7	-	82691722	82691722	16724991	1	636,	0,
#Partially deleted in new
chr15	82710470	82713993	chr15:82710470-82713993	5	-	82710470	82710470	16724991	4	105,246,747,264,	0,716,1090,3259,
#Partially deleted in new
chr15	82710470	82714029	chr15:82710470-82714029	7	-	82710470	82710470	16724991	4	105,246,632,300,	0,716,1205,3259,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	82710472	82714026	chr15:82710472-82714026	4	-	82710472	82710472	16724991	2	103,2466,	0,1088,
#Deleted in new
chr15	82711245	82711877	chr15:82711245-82711877	5	-	82711245	82711245	16724991	2	153,202,	0,430,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	82725872	82738616	chr15:82725872-82738616	7	-	82725872	82725872	16724991	2	1559,103,	0,12641,
#Deleted in new
chr15	82726306	82727425	chr15:82726306-82727425	5	-	82726306	82726306	16724991	1	1119,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	82730789	82738904	chr15:82730789-82738904	5	-	82730789	82730789	16724991	2	146,391,	0,7724,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	82738385	82739122	chr15:82738385-82739122	3	+	82738385	82738385	8553170	1	737,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	82744222	82750289	chr15:82744222-82750289	3	+	82744222	82744222	8553170	2	97,994,	0,5073,
#Partially deleted in new
chr15	82750563	82754937	chr15:82750563-82754937	0	+	82750563	82750563	789624	2	285,309,	0,4065,
#Partially deleted in new
chr15	82750565	82755037	chr15:82750565-82755037	0	+	82750565	82750565	789624	2	149,409,	0,4063,
#Partially deleted in new
chr15	82750571	82757204	chr15:82750571-82757204	3	+	82750571	82750571	789624	4	277,156,56,301,	0,4057,6158,6332,
#Partially deleted in new
chr15	82750582	82757206	chr15:82750582-82757206	0	+	82750582	82750582	789624	3	266,156,303,	0,4046,6321,
#Partially deleted in new
chr15	82750583	82757206	chr15:82750583-82757206	1	+	82750583	82750583	789624	5	265,156,56,36,161,	0,4045,6146,6320,6462,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	82752883	82757208	chr15:82752883-82757208	3	+	82752883	82752883	8553170	1	4325,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr15	82755361	82806069	chr15:82755361-82806069	3	-	82759347	82787390	789624	13	4239,177,133,134,151,135,156,122,23,231,96,717,104,	0,6740,9804,10536,13518,14388,16711,23404,24883,27433,31149,31390,50604,
#Deleted in new
chr15	82755944	82756071	chr15:82755944-82756071	3	+	82755944	82755944	789624	1	127,	0,
#Partially deleted in new
chr15	82759273	82806054	chr15:82759273-82806054	1	-	82759347	82787390	789624	12	327,177,133,134,151,156,122,23,231,96,717,89,	0,2828,5892,6624,9606,12799,19492,20971,23521,27237,27478,46692,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	82787087	82806070	chr15:82787087-82806070	0	-	82787087	82787390	789624	3	381,117,105,	0,9162,18878,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	82809627	82836108	chr15:82809627-82836108	3	+	82809726	82833536	0	10	708,174,151,170,166,188,87,96,481,2880,	0,3475,7064,8292,9695,13472,16782,17123,20971,23601,
#Partially deleted in new
chr15	82817919	82826794	chr15:82817919-82826794	0	+	82817919	82817919	8553170	5	170,166,188,109,44,	0,1403,5180,8468,8831,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	82836945	82849727	chr15:82836945-82849727	0	-	82849714	82849727	8553170	2	10302,39,	0,12743,
#Partially deleted in new
chr15	82848982	82952728	chr15:82848982-82952728	3	-	82849714	82952535	789624	9	921,81,111,157,140,93,132,157,198,	0,2168,3159,5661,10046,15184,26290,43702,103548,
#Partially deleted in new
chr15	82848982	82952721	chr15:82848982-82952721	1	-	82849714	82952535	789624	9	921,81,111,157,107,93,132,157,191,	0,2168,3159,5661,10046,15184,26290,43702,103548,
#Partially deleted in new
chr15	82849678	82852783	chr15:82849678-82852783	0	-	82849678	82849678	8553170	3	225,81,642,	0,1472,2463,
#Partially deleted in new
chr15	82851195	82864259	chr15:82851195-82864259	0	-	82851195	82864259	789624	5	36,111,157,158,93,	0,946,3448,7833,12971,
#Partially deleted in new
chr15	82854694	82898453	chr15:82854694-82898453	0	-	82854694	82854694	8553170	6	106,107,93,132,157,64,	0,4334,9472,20578,37990,43695,
#Partially deleted in new
chr15	82864212	82986120	chr15:82864212-82986120	0	-	82864212	82864212	8553170	4	47,132,157,334,	0,11060,28472,121574,
#Partially deleted in new
chr15	82892684	82986153	chr15:82892684-82986153	0	-	82892684	82892684	8553170	2	157,74,	0,93395,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	82925883	83103443	chr15:82925883-83103443	3	+	82925883	82925883	8553170	2	734,20,	0,177540,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	82958129	82985868	chr15:82958129-82985868	0	-	82958129	82958129	8553170	2	1179,82,	0,27657,
#Deleted in new
chr15	82985552	82986070	chr15:82985552-82986070	0	-	82985552	82985552	8553170	1	518,	0,
#Partially deleted in new
chr15	82986206	82991057	chr15:82986206-82991057	3	+	82989018	82990067	0	4	163,49,179,1177,	0,1129,2803,3674,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	82988440	83008616	chr15:82988440-83008616	0	-	82988639	83008616	789624	2	388,69,	0,20107,
#Partially deleted in new
chr15	82988962	83011607	chr15:82988962-83011607	1	-	82989073	83011607	789624	4	195,128,127,111,	0,19585,21274,22534,
#Partially deleted in new
chr15	82989105	83011604	chr15:82989105-83011604	0	-	82989105	83011604	789624	3	52,127,108,	0,21131,22391,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	82990618	83011607	chr15:82990618-83011607	1	-	82990632	83011607	789624	5	37,115,128,127,111,	0,1313,17929,19618,20878,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	82994822	83011615	chr15:82994822-83011615	3	-	83005596	83011607	789624	4	10870,128,127,119,	0,13725,15414,16674,
#Partially deleted in new
chr15	83004685	83011585	chr15:83004685-83011585	0	-	83004876	83011585	789624	4	287,128,127,89,	0,3862,5551,6811,
#Partially deleted in new
chr15	83004866	83011543	chr15:83004866-83011543	0	-	83010317	83011543	789624	4	106,128,127,58,	0,3681,5370,6619,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	83005278	83011641	chr15:83005278-83011641	1	-	83005596	83011607	789624	2	414,145,	0,6218,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	83005297	83011594	chr15:83005297-83011594	0	-	83005297	83005297	8553170	3	395,128,1358,	0,3250,4939,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	83007850	83011610	chr15:83007850-83011610	0	-	83007850	83007850	789624	3	825,127,125,	0,2386,3635,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	83008404	83011639	chr15:83008404-83011639	0	-	83008404	83008404	8553170	3	271,127,143,	0,1832,3092,
#Partially deleted in new
chr15	83012660	83061845	chr15:83012660-83061845	3	+	83012660	83012660	8553170	2	62,359,	0,48826,
#Partially deleted in new
chr15	83016421	83067354	chr15:83016421-83067354	3	-	83018066	83067151	789624	8	1804,147,88,193,198,106,157,604,	0,2285,4253,13714,25306,33651,39967,50329,
#Partially deleted in new
chr15	83017960	83067151	chr15:83017960-83067151	1	-	83018750	83067151	789624	7	265,147,193,198,106,157,401,	0,746,12175,23767,32112,38428,48790,
#Partially deleted in new
chr15	83018739	83056479	chr15:83018739-83056479	0	-	83041904	83056479	789624	6	114,88,113,193,198,91,	0,1935,9876,11396,22988,37649,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	83020114	83020802	chr15:83020114-83020802	3	+	83020114	83020114	8553170	1	688,	0,
#Partially deleted in new
chr15	83020745	83030766	chr15:83020745-83030766	0	-	83020745	83020745	8553170	2	17,631,	0,9390,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	83022235	83024336	chr15:83022235-83024336	3	-	83022235	83022235	8553170	2	243,211,	0,1890,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	83022570	83090782	chr15:83022570-83090782	3	+	83022570	83022570	8553170	2	37,462,	0,67750,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	83029542	83041821	chr15:83029542-83041821	0	-	83029542	83029542	8553170	3	321,193,94,	0,593,12185,
#Partially deleted in new
chr15	83044367	83044771	chr15:83044367-83044771	7	+	83044367	83044367	16724991	1	404,	0,
#Deleted in new
chr15	83067334	83067415	chr15:83067334-83067415	3	+	83067334	83067334	5263520	1	81,	0,
#Partially deleted in new
chr15	83107406	83137359	chr15:83107406-83137359	3	+	83107680	83136672	789624	10	366,104,98,104,83,122,105,93,120,879,	0,5390,8438,12171,14514,15350,17265,19348,19951,29074,
#Partially deleted in new
chr15	83107571	83137408	chr15:83107571-83137408	1	+	83107680	83127443	789624	7	201,104,98,104,83,120,928,	0,5225,8273,12006,14349,19786,28909,
#Partially deleted in new
chr15	83107647	83137281	chr15:83107647-83137281	0	+	83107680	83119685	789624	10	125,104,98,157,83,122,105,93,120,801,	0,5149,8197,11930,14273,15109,17024,19107,19710,28833,
#Partially deleted in new
chr15	83107657	83137408	chr15:83107657-83137408	0	+	83107680	83127397	789624	6	115,104,98,104,120,928,	0,5139,8187,11920,19700,28823,
#Partially deleted in new
chr15	83107680	83136672	chr15:83107680-83136672	1	+	83107680	83136672	789624	9	92,104,98,104,83,122,105,120,192,	0,5116,8164,11897,14240,15076,16991,19677,28800,
#Partially deleted in new
chr15	83107682	83120086	chr15:83107682-83120086	0	+	83107682	83107682	8553170	5	204,104,98,104,38,	0,5114,8162,11895,12366,
#Partially deleted in new
chr15	83107710	83126818	chr15:83107710-83126818	0	+	83115921	83126818	789624	8	176,104,98,104,83,122,105,64,	0,5086,8134,11867,14210,15046,16961,19044,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	83112737	83157989	chr15:83112737-83157989	0	-	83115708	83157989	789624	4	3004,147,159,87,	0,38477,44677,45165,
#Deleted in new
chr15	83113616	83114566	chr15:83113616-83114566	3	-	83113616	83113616	8553170	2	162,234,	0,716,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	83127403	83144854	chr15:83127403-83144854	0	+	83127403	83144539	789624	2	74,333,	0,17118,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	83127752	83208018	chr15:83127752-83208018	3	-	83139269	83207414	789624	6	11523,147,159,139,77,688,	0,23462,29662,30150,36246,79578,
#Partially deleted in new
chr15	83139131	83207541	chr15:83139131-83207541	0	-	83192257	83207414	789624	7	144,147,159,139,77,57,211,	0,12083,18283,18771,24867,53120,68199,
#Partially deleted in new
chr15	83163769	83207450	chr15:83163769-83207450	0	-	83163769	83163769	8553170	2	306,120,	0,43561,
#Partially deleted in new
chr15	83164038	83207528	chr15:83164038-83207528	0	-	83192257	83207414	789624	4	37,156,57,198,	0,25322,28213,43292,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	83179181	83186068	chr15:83179181-83186068	1	+	83179181	83179181	8553170	4	70,71,142,135,	0,596,5532,6752,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	83180801	83184796	chr15:83180801-83184796	1	+	83180801	83180801	8553170	2	220,149,	0,3846,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	83184804	83439445	chr15:83184804-83439445	3	+	83184804	83184804	8553170	2	264,26,	0,254615,
#Partially deleted in new
chr15	83255902	83284714	chr15:83255902-83284714	3	-	83257441	83284628	789624	5	2224,1865,236,100,185,	0,7048,10933,12230,28627,
#Partially deleted in new
chr15	83257343	83283319	chr15:83257343-83283319	1	-	83257441	83283212	789624	5	783,1865,236,100,185,	0,5607,9492,10789,25791,
#Partially deleted in new
chr15	83447227	83618743	chr15:83447227-83618743	3	+	83447533	83618287	0	9	351,69,73,144,134,159,104,110,662,	0,112025,117906,121301,125337,129355,139755,141434,170854,
#Partially deleted in new
chr15	83447227	83565883	chr15:83447227-83565883	0	+	83447227	83447227	8553170	3	351,69,750,	0,112025,117906,
#Partially deleted in new
chr15	83447375	83618739	chr15:83447375-83618739	0	+	83447533	83568546	789624	9	203,69,73,137,134,159,104,110,658,	0,111877,117758,121160,125189,129207,139607,141286,170706,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	83447530	83618739	chr15:83447530-83618739	1	+	83490833	83618287	0	12	48,236,126,151,69,73,144,134,159,104,110,658,	0,40530,41658,43221,111722,117603,120998,125034,129052,139452,141131,170551,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	83609269	83618642	chr15:83609269-83618642	0	+	83609269	83609269	8553170	2	197,561,	0,8812,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	83609402	83618305	chr15:83609402-83618305	0	+	83609402	83609402	8553170	3	64,170,224,	0,2015,8679,
#Partially deleted in new
chr15	83654085	84039842	chr15:83654085-84039842	3	+	83655761	84037806	789624	30	191,102,120,128,46,237,127,75,158,112,139,51,205,148,85,287,130,193,180,154,1072,128,129,183,117,184,199,98,215,2143,	0,1643,50303,119437,150564,165725,184003,204680,216716,231015,236023,237243,238598,243772,245561,259006,269818,288510,288817,316398,328187,334605,337000,360456,362297,367324,371152,377249,382687,383614,
#Partially deleted in new
chr15	83654087	84039427	chr15:83654087-84039427	1	+	83655761	84037825	789624	30	189,102,120,128,46,237,127,75,158,112,139,51,205,148,85,287,130,193,180,154,1072,128,129,183,117,184,199,98,232,1665,	0,1641,50301,119435,150562,165723,184001,204678,216714,231013,236021,237241,238596,243770,245559,259004,269816,288508,288815,316396,328185,334603,336998,360454,362295,367322,371150,377247,382685,383675,
#Partially deleted in new
chr15	83654094	84025551	chr15:83654094-84025551	0	+	83654094	83654094	8553170	27	182,102,120,128,46,237,127,75,158,112,139,51,205,148,85,287,130,193,180,154,1072,128,129,183,117,184,314,	0,1634,50294,119428,150555,165716,183994,204671,216707,231006,236014,237234,238589,243763,245552,258997,269809,288501,288808,316389,328178,334596,336991,360447,362288,367315,371143,
#Partially deleted in new
chr15	83694293	83819979	chr15:83694293-83819979	0	+	83694293	83694293	8553170	5	80,120,128,46,169,	0,10095,79229,110356,125517,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	83717426	83717522	chr15:83717426-83717522	3	+	83717426	83717426	8553170	1	96,	0,
#Deleted in new
chr15	83739783	83740199	chr15:83739783-83740199	7	+	83739783	83739783	16724991	1	416,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	83824862	83824953	chr15:83824862-83824953	3	-	83824862	83824862	8553170	1	91,	0,
#Partially deleted in new
chr15	83870911	83891065	chr15:83870911-83891065	0	+	83870911	83870911	8553170	3	48,139,346,	0,19197,19808,
#Partially deleted in new
chr15	83945734	83982489	chr15:83945734-83982489	0	+	83945734	83945734	8553170	3	180,154,217,	0,24749,36538,
#Partially deleted in new
chr15	83945755	83982305	chr15:83945755-83982305	0	+	83945755	83945755	8553170	4	159,229,154,33,	0,15817,24728,36517,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	83962175	83962583	chr15:83962175-83962583	3	+	83962175	83962175	8553170	1	408,	0,
#Partially deleted in new
chr15	84053112	84080097	chr15:84053112-84080097	7	-	84053112	84053112	16724991	2	943,53,	0,26932,
#Partially deleted in new
chr15	84080167	84113676	chr15:84080167-84113676	5	+	84080167	84080167	16724991	6	159,100,68,85,134,50,	0,978,4032,10041,21863,33459,
#Partially deleted in new
chr15	84080167	84126604	chr15:84080167-84126604	7	+	84080167	84080167	16724991	14	159,100,68,85,134,138,215,77,137,123,100,152,167,143,	0,978,4032,10041,21863,22707,24437,31873,32666,33417,35877,40922,41335,46294,
#Partially deleted in new
chr15	84090224	84104819	chr15:84090224-84104819	4	+	84090224	84090224	16724991	3	69,134,215,	0,11806,14380,
#Partially deleted in new
chr15	84112945	84121561	chr15:84112945-84121561	4	+	84112945	84112945	16724991	5	25,123,100,152,59,	0,639,3099,8144,8557,
#Deleted in new
chr15	84166546	84169896	chr15:84166546-84169896	3	-	84166546	84166546	789624	1	3350,	0,
#Deleted in new
chr15	84171177	84173194	chr15:84171177-84173194	3	-	84171177	84171177	8553170	2	290,256,	0,1761,
#Partially deleted in new
chr15	84172489	84182233	chr15:84172489-84182233	3	+	84172501	84182143	789624	3	96,150,252,	0,1518,9492,
#Partially deleted in new
chr15	84172492	84182234	chr15:84172492-84182234	0	+	84172492	84172492	8553170	3	93,150,253,	0,1515,9489,
#Partially deleted in new
chr15	84172600	84182226	chr15:84172600-84182226	0	+	84172600	84172600	8553170	3	474,150,245,	0,1407,9381,
#Partially deleted in new
chr15	84172641	84182159	chr15:84172641-84182159	0	+	84172641	84172641	8553170	3	433,175,178,	0,1341,9340,
#Partially deleted in new
chr15	84172972	84182076	chr15:84172972-84182076	4	+	84172972	84172972	16724991	3	102,150,95,	0,1035,9009,
#Partially deleted in new
chr15	84186751	84197384	chr15:84186751-84197384	7	+	84186751	84186751	16724991	7	237,3522,487,171,199,133,161,	0,1905,7010,8107,9896,10196,10472,
#Partially deleted in new
chr15	84199310	84230125	chr15:84199310-84230125	7	-	84199310	84199310	16724991	7	1898,151,155,91,92,189,274,	0,3559,4866,5115,5289,5476,30541,
#Partially deleted in new
chr15	84199310	84230022	chr15:84199310-84230022	5	-	84199310	84199310	16724991	5	3710,91,92,189,171,	0,5115,5289,5476,30541,
#Partially deleted in new
chr15	84199311	84230136	chr15:84199311-84230136	5	-	84199311	84199311	16724991	7	1565,151,155,91,189,89,285,	0,3558,4865,5114,5475,5919,30540,
#Partially deleted in new
chr15	84200880	84204525	chr15:84200880-84204525	4	-	84200880	84200880	16724991	3	328,151,100,	0,1989,3545,
#Partially deleted in new
chr15	84200960	84204516	chr15:84200960-84204516	4	-	84200960	84200960	16724991	3	248,138,91,	0,1909,3465,
#Partially deleted in new
chr15	84202708	84230090	chr15:84202708-84230090	4	-	84202708	84202708	16724991	6	312,91,92,189,89,189,	0,1717,1891,2078,2522,27193,
#Partially deleted in new
chr15	84202728	84230090	chr15:84202728-84230090	4	-	84202728	84202728	16724991	5	292,91,92,189,239,	0,1697,1871,2058,27123,
#Partially deleted in new
chr15	84202801	84204604	chr15:84202801-84204604	4	-	84202801	84202801	16724991	3	219,155,179,	0,1375,1624,
#Partially deleted in new
chr15	84203865	84205319	chr15:84203865-84205319	5	-	84203865	84203865	16724991	5	221,155,91,189,89,	0,311,560,921,1365,
#Partially deleted in new
chr15	84204181	84230136	chr15:84204181-84230136	5	-	84204181	84204181	16724991	6	150,91,92,189,89,285,	0,244,418,605,1049,25670,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	84205453	84205700	chr15:84205453-84205700	3	-	84205453	84205453	8553170	1	247,	0,
#Partially deleted in new
chr15	84235772	84245368	chr15:84235772-84245368	1	+	84235834	84242592	789624	11	146,120,60,81,88,203,195,189,61,103,2909,	0,1813,2555,2800,3545,4015,4449,4821,5276,6374,6687,
#Partially deleted in new
chr15	84235772	84245368	chr15:84235772-84245368	3	+	84235834	84242592	789624	9	146,120,60,81,88,995,61,103,2909,	0,1813,2555,2800,3545,4015,5276,6374,6687,
#Partially deleted in new
chr15	84237585	84242677	chr15:84237585-84242677	0	+	84237585	84242592	789624	6	120,60,81,88,103,218,	0,742,987,1732,4561,4874,
#Deleted in new
chr15	84237917	84240683	chr15:84237917-84240683	0	+	84237917	84237917	8553170	2	1488,896,	0,1870,
#Deleted in new
chr15	84240616	84241352	chr15:84240616-84241352	0	+	84240616	84240616	8553170	2	166,304,	0,432,
#Deleted in new
chr15	84255912	84256014	chr15:84255912-84256014	7	+	84255912	84255912	16724991	1	102,	0,
#Partially deleted in new
chr15	84389728	84395903	chr15:84389728-84395903	7	+	84389728	84389728	16724991	9	123,56,81,85,376,58,52,46,93,	0,745,986,1721,2186,2824,3915,5825,6082,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	84394071	84394336	chr15:84394071-84394336	3	+	84394071	84394071	8553170	1	265,	0,
#Deleted in new
chr15	84394511	84395514	chr15:84394511-84395514	7	+	84394511	84394511	16724991	4	42,189,84,74,	0,297,750,929,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	84398315	84411701	chr15:84398315-84411701	7	-	84398315	84398315	16724991	3	1369,3519,3864,	0,4333,9522,
#Partially deleted in new
chr15	84398989	84401731	chr15:84398989-84401731	5	-	84398989	84398989	16724991	3	178,300,44,	0,395,2698,
#Deleted in new
chr15	84401806	84408005	chr15:84401806-84408005	7	-	84401806	84401806	16724991	3	43,3519,168,	0,842,6031,
#Partially deleted in new
chr15	84412772	84421837	chr15:84412772-84421837	7	-	84412772	84412772	16724991	2	103,102,	0,8963,
#Deleted in new
chr15	84422617	84425882	chr15:84422617-84425882	3	+	84422617	84422617	789624	4	26,125,988,73,	0,724,1117,3192,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	84467900	84468147	chr15:84467900-84468147	3	+	84467900	84467900	8553170	1	247,	0,
#Partially deleted in new
chr15	84491479	84500599	chr15:84491479-84500599	7	-	84491479	84491479	16724991	2	102,102,	0,9018,
#Deleted in new
chr15	84500377	84502381	chr15:84500377-84502381	3	+	84500377	84500377	8553170	2	256,290,	0,1714,
#Deleted in new
chr15	84505462	84505495	chr15:84505462-84505495	7	+	84505462	84505462	16724991	1	33,	0,
#Partially deleted in new
chr15	84507884	84511468	chr15:84507884-84511468	5	-	84507884	84507884	16724991	3	2172,103,62,	0,2382,3522,
#Partially deleted in new
chr15	84509925	84516785	chr15:84509925-84516785	7	-	84509925	84509925	16724991	9	131,103,61,1100,88,81,60,120,84,	0,341,1481,1808,3289,4041,4307,4989,6776,
#Deleted in new
chr15	84512717	84516814	chr15:84512717-84516814	5	-	84512717	84512717	16724991	6	116,88,81,60,120,113,	0,497,1249,1515,2197,3984,
#Partially deleted in new
chr15	84513240	84526949	chr15:84513240-84526949	3	-	84513240	84513240	8553170	5	62,81,60,120,169,	0,726,992,1674,13540,
#Partially deleted in new
chr15	84526780	84570700	chr15:84526780-84570700	7	-	84526780	84526780	16724991	10	96,49,59,85,85,138,57,110,102,102,	0,838,7399,11751,12923,15366,19440,28180,35179,43818,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	84527195	84570795	chr15:84527195-84570795	4	-	84527195	84527195	16724991	6	472,85,140,57,105,1291,	0,11336,14949,19025,27770,42309,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	84527210	84571009	chr15:84527210-84571009	4	-	84527210	84527210	16724991	8	457,85,85,140,57,105,179,523,	0,11321,12493,14934,19010,27755,42294,43276,
#Partially deleted in new
chr15	84527631	84542229	chr15:84527631-84542229	4	-	84527631	84527631	16724991	4	36,85,85,85,	0,10900,12072,14513,
#Partially deleted in new
chr15	84538562	84542597	chr15:84538562-84542597	4	-	84538562	84538562	16724991	2	54,453,	0,3582,
#Partially deleted in new
chr15	84542144	84570712	chr15:84542144-84570712	4	-	84542144	84542144	16724991	5	140,57,105,179,114,	0,4076,12821,27360,28454,
#Deleted in new
chr15	84570648	84573254	chr15:84570648-84573254	5	+	84570648	84570648	16724991	3	86,130,233,	0,1566,2373,
#Partially deleted in new
chr15	84570923	84578124	chr15:84570923-84578124	5	+	84570923	84570923	16724991	2	42,177,	0,7024,
#Deleted in new
chr15	84570970	84573198	chr15:84570970-84573198	4	+	84570970	84570970	16724991	3	258,125,177,	0,1244,2051,
#Partially deleted in new
chr15	84571133	84578393	chr15:84571133-84578393	4	+	84571133	84571133	16724991	3	95,125,446,	0,1081,6814,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	84572191	84580175	chr15:84572191-84580175	7	+	84572191	84572191	16724991	3	148,230,2228,	0,830,5756,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	84597808	84633987	chr15:84597808-84633987	3	-	84597808	84597808	8553170	5	1995,126,102,980,464,	0,6051,8553,33490,35715,
#Partially deleted in new
chr15	84600985	84620649	chr15:84600985-84620649	0	+	84603927	84620649	789624	3	150,381,48,	0,2834,19616,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	84601004	84623716	chr15:84601004-84623716	3	+	84603927	84622040	789624	3	184,514,3115,	0,2815,19597,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	84601008	84604088	chr15:84601008-84604088	0	+	84603927	84604088	789624	3	127,64,269,	0,1178,2811,
#Partially deleted in new
chr15	84601014	84622208	chr15:84601014-84622208	1	+	84603927	84622040	789624	3	121,514,1607,	0,2805,19587,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	84601015	84604025	chr15:84601015-84604025	0	+	84603927	84604025	789624	3	120,252,206,	0,983,2804,
#Partially deleted in new
chr15	84601017	84606889	chr15:84601017-84606889	1	+	84603927	84606575	789624	3	118,514,361,	0,2802,5511,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	84601019	84623716	chr15:84601019-84623716	1	+	84620645	84622040	789624	2	116,3115,	0,19582,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	84601022	84604010	chr15:84601022-84604010	0	+	84603927	84604010	789624	3	113,277,191,	0,951,2797,
#Partially deleted in new
chr15	84601049	84622394	chr15:84601049-84622394	1	+	84603927	84622040	789624	3	86,511,1793,	0,2770,19552,
#Partially deleted in new
chr15	84601049	84616614	chr15:84601049-84616614	1	+	84603927	84616343	789624	3	86,514,306,	0,2770,15259,
#Partially deleted in new
chr15	84603900	84623717	chr15:84603900-84623717	1	+	84603927	84622671	789624	4	433,171,69,237,	0,16701,18745,19580,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	84603900	84623643	chr15:84603900-84623643	1	+	84603927	84623278	789624	4	433,171,137,368,	0,16701,18677,19375,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	84603900	84623643	chr15:84603900-84623643	0	+	84603927	84622040	789624	3	433,2113,368,	0,16701,19375,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	84603900	84623636	chr15:84603900-84623636	1	+	84603927	84623331	789624	3	433,171,361,	0,16701,19375,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	84611688	84614969	chr15:84611688-84614969	3	-	84611688	84611688	8553170	2	471,547,	0,2734,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	84622014	84623237	chr15:84622014-84623237	3	-	84622014	84622014	8553170	1	1223,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	84622927	84627796	chr15:84622927-84627796	0	+	84622927	84622927	8553170	2	205,101,	0,4768,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	84631450	84647478	chr15:84631450-84647478	5	+	84631450	84631450	16724991	4	848,74,82,7971,	0,5896,6945,8057,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	84631465	84642137	chr15:84631465-84642137	4	+	84631465	84631465	16724991	6	833,74,124,993,108,255,	0,5881,6888,8042,9689,10417,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	84631478	84635421	chr15:84631478-84635421	4	+	84631478	84631478	16724991	2	820,1598,	0,2345,
#Partially deleted in new
chr15	84631542	84634039	chr15:84631542-84634039	4	+	84631542	84631542	16724991	3	52,102,216,	0,654,2281,
#Partially deleted in new
chr15	84631826	84637421	chr15:84631826-84637421	4	+	84631826	84631826	16724991	2	512,75,	0,5520,
#Partially deleted in new
chr15	84631826	84638413	chr15:84631826-84638413	6	+	84631826	84631826	16724991	3	472,74,60,	0,5520,6527,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	84631962	84642066	chr15:84631962-84642066	5	+	84631962	84631962	16724991	3	336,278,55,	0,7738,10049,
#Deleted in new
chr15	84633873	84634635	chr15:84633873-84634635	7	+	84633873	84633873	16724991	1	762,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	84634229	84640559	chr15:84634229-84640559	4	+	84634229	84634229	16724991	4	152,74,82,1052,	0,3117,4166,5278,
#Partially deleted in new
chr15	84634261	84639640	chr15:84634261-84639640	4	+	84634261	84634261	16724991	5	120,61,74,82,133,	0,1590,3085,4134,5246,
#Partially deleted in new
chr15	84634280	84639562	chr15:84634280-84639562	4	+	84634280	84634280	16724991	4	101,74,124,55,	0,3066,4073,5227,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	84639280	84654335	chr15:84639280-84654335	3	-	84643469	84654274	789624	8	4443,366,165,65,89,89,68,102,	0,6190,6903,8609,9256,13433,14351,14953,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	84642486	84642763	chr15:84642486-84642763	3	-	84642486	84642486	8553170	1	277,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	84642767	84654343	chr15:84642767-84654343	0	-	84642767	84642767	789624	8	956,366,165,65,89,89,68,117,	0,2703,3416,5122,5769,9946,10864,11459,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	84642767	84654280	chr15:84642767-84654280	0	-	84642767	84642767	789624	8	956,366,376,65,89,89,68,54,	0,2703,3205,5122,5769,9946,10864,11459,
#Partially deleted in new
chr15	84643054	84654280	chr15:84643054-84654280	0	-	84643054	84643054	8553170	7	669,366,165,736,89,68,47,	0,2416,3129,4835,9659,10577,11179,
#Partially deleted in new
chr15	84643081	84654246	chr15:84643081-84654246	0	-	84643081	84643081	789624	7	642,366,165,65,89,89,615,	0,2389,3102,4808,5455,9632,10550,
#Partially deleted in new
chr15	84643144	84648586	chr15:84643144-84648586	0	-	84643144	84643144	8553170	3	579,878,697,	0,2326,4745,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	84644954	84654231	chr15:84644954-84654231	0	-	84644954	84644954	8553170	3	3671,89,1311,	0,7759,7966,
#Partially deleted in new
chr15	84645468	84654273	chr15:84645468-84654273	0	-	84646065	84654273	789624	8	368,113,165,65,89,89,68,40,	0,504,715,2421,3068,7245,8163,8765,
#Partially deleted in new
chr15	84645468	84654266	chr15:84645468-84654266	0	-	84646347	84654266	789624	6	368,165,65,89,68,33,	0,715,2421,7245,8163,8765,
#Partially deleted in new
chr15	84645577	84654272	chr15:84645577-84654272	0	-	84645577	84645577	8553170	6	259,165,65,89,89,573,	0,606,2312,2959,7136,8122,
#Partially deleted in new
chr15	84645693	84654274	chr15:84645693-84654274	0	-	84645693	84645693	8553170	6	655,65,89,89,68,41,	0,2196,2843,7020,7938,8540,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	84645987	84654258	chr15:84645987-84654258	0	-	84646964	84654258	789624	8	98,165,334,65,89,89,68,25,	0,196,702,1902,2549,6726,7644,8246,
#Partially deleted in new
chr15	84646036	84654283	chr15:84646036-84654283	0	-	84646036	84646036	8553170	7	49,165,65,89,89,68,57,	0,147,1853,2500,6677,7595,8190,
#Partially deleted in new
chr15	84646184	84653750	chr15:84646184-84653750	0	-	84646184	84646184	8553170	5	164,65,89,89,119,	0,1705,2352,6529,7447,
#Partially deleted in new
chr15	84646305	84654231	chr15:84646305-84654231	0	-	84646305	84646305	8553170	6	43,65,89,89,68,206,	0,1584,2231,6408,7326,7720,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	84647085	84654298	chr15:84647085-84654298	0	-	84647085	84647085	8553170	5	869,89,89,68,65,	0,1451,5628,6546,7148,
#Partially deleted in new
chr15	84648311	84654283	chr15:84648311-84654283	0	-	84648311	84648311	8553170	4	314,89,68,57,	0,4402,5320,5915,
#Partially deleted in new
chr15	84648456	84654241	chr15:84648456-84654241	0	-	84648456	84648456	8553170	4	169,89,68,216,	0,4257,5175,5569,
#Partially deleted in new
chr15	84648464	84654000	chr15:84648464-84654000	0	-	84648464	84648464	8553170	3	161,89,301,	0,4249,5235,
#Partially deleted in new
chr15	84648519	84654000	chr15:84648519-84654000	0	-	84648519	84648519	8553170	3	106,89,369,	0,4194,5112,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	84653181	84654290	chr15:84653181-84654290	0	-	84653181	84653181	8553170	2	518,64,	0,1045,
#Partially deleted in new
chr15	84655128	84658548	chr15:84655128-84658548	3	-	84655373	84658152	0	3	281,173,553,	0,2047,2867,
#Partially deleted in new
chr15	84655128	84658563	chr15:84655128-84658563	1	-	84655269	84658152	0	3	276,173,568,	0,2047,2867,
#Partially deleted in new
chr15	84669537	84716460	chr15:84669537-84716460	1	-	84670018	84716075	789624	5	532,58,120,110,436,	0,1187,11175,21997,46487,
#Partially deleted in new
chr15	84669543	84716716	chr15:84669543-84716716	3	-	84670018	84716075	789624	6	526,58,120,150,110,692,	0,1181,11169,18081,21991,46481,
#Partially deleted in new
chr15	84669543	84716089	chr15:84669543-84716089	1	-	84669942	84716075	789624	5	526,120,150,110,65,	0,11169,18081,21991,46481,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	84669543	84671747	chr15:84669543-84671747	0	-	84669543	84669543	8553170	1	2204,	0,
#Partially deleted in new
chr15	84669543	84716111	chr15:84669543-84716111	1	-	84670756	84716075	789624	7	526,58,38,120,150,110,87,	0,1181,10388,11169,18081,21991,46481,
#Partially deleted in new
chr15	84669544	84716063	chr15:84669544-84716063	0	-	84670018	84716063	789624	5	525,58,150,110,39,	0,1180,18080,21990,46480,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	84669545	84673826	chr15:84669545-84673826	0	-	84669545	84669545	8553170	2	524,3102,	0,1179,
#Partially deleted in new
chr15	84669559	84716163	chr15:84669559-84716163	1	-	84670018	84691617	789624	7	510,58,120,150,110,136,139,	0,1165,11153,18065,21975,45171,46465,
#Partially deleted in new
chr15	84669853	84716127	chr15:84669853-84716127	0	-	84679226	84716075	789624	7	216,58,62,120,150,110,103,	0,871,9372,10859,17771,21681,46171,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	84680746	84716067	chr15:84680746-84716067	0	-	84680746	84691617	789624	5	86,150,110,151,43,	0,6878,10788,11223,35278,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	84685883	84686946	chr15:84685883-84686946	3	+	84685883	84685883	8553170	2	55,432,	0,631,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	84717473	84746837	chr15:84717473-84746837	3	-	84717473	84717473	8553170	2	81,1630,	0,27734,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	84748634	84806432	chr15:84748634-84806432	3	+	84782675	84802393	789624	11	30,109,130,2239,179,177,160,288,113,136,4570,	0,16072,29548,34022,42070,49234,49680,49953,50463,51207,53228,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	84753121	84754502	chr15:84753121-84754502	3	+	84753121	84753121	8553170	2	396,33,	0,1348,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	84778259	84802438	chr15:84778259-84802438	0	+	84782675	84798326	789624	9	53,2239,168,177,160,288,113,136,576,	0,4397,12445,19609,20055,20328,20838,21582,23603,
#Partially deleted in new
chr15	84782653	84806430	chr15:84782653-84806430	1	+	84782675	84802393	789624	8	2242,179,177,160,288,113,136,4568,	0,8051,15215,15661,15934,16444,17188,19209,
#Deleted in new
chr15	84803733	84804799	chr15:84803733-84804799	0	+	84803733	84803733	8553170	2	115,93,	0,973,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr15	84816679	84873482	chr15:84816679-84873482	3	+	84816846	84868456	789624	14	916,39,122,118,1231,2164,148,128,36,281,89,224,49,5372,	0,6650,10804,22300,23022,39712,42563,43096,43357,45955,46872,47762,50637,51431,
#Deleted in new
chr15	84852497	84852615	chr15:84852497-84852615	3	-	84852497	84852497	8553170	1	118,	0,
#Partially deleted in new
chr15	84863528	84868212	chr15:84863528-84868212	0	+	84863528	84863528	8553170	4	112,224,49,102,	0,913,3788,4582,
#Partially deleted in new
chr15	84884653	84896046	chr15:84884653-84896046	1	+	84887760	84895444	789624	7	98,116,112,89,92,184,669,	0,2018,3091,4118,5789,10286,10724,
#Partially deleted in new
chr15	84884660	84945796	chr15:84884660-84945796	3	+	84887760	84945200	789624	19	91,116,112,89,92,184,142,114,78,81,81,126,131,169,198,82,99,112,672,	0,2011,3084,4111,5782,10279,19436,20878,24057,33863,36328,39324,48484,50365,50660,58784,59905,60095,60464,
#Partially deleted in new
chr15	84884660	84945796	chr15:84884660-84945796	1	+	84887760	84945200	789624	15	91,112,89,92,184,142,114,78,81,81,126,82,99,112,672,	0,3084,4111,5782,10279,19436,20878,24057,33863,36328,39324,58784,59905,60095,60464,
#Partially deleted in new
chr15	84884677	84945796	chr15:84884677-84945796	1	+	84887760	84945200	789624	18	74,112,89,92,184,142,114,78,81,81,126,131,169,198,82,99,112,672,	0,3067,4094,5765,10262,19419,20861,24040,33846,36311,39307,48467,50348,50643,58767,59888,60078,60447,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	84939616	84939723	chr15:84939616-84939723	3	-	84939616	84939616	8553170	1	107,	0,
#Deleted in new
chr15	84940503	84941133	chr15:84940503-84941133	7	-	84940503	84940503	16724991	1	630,	0,
#Partially deleted in new
chr15	84980439	85139145	chr15:84980439-85139145	3	+	84982162	85137903	0	23	63,375,57,191,57,55,89,79,138,89,52,43,78,71,165,49,136,199,218,133,168,130,1349,	0,1534,83930,86574,95422,96293,103116,108898,110604,117508,119575,119716,128613,132937,133433,134999,135544,137201,140357,142621,145767,156094,157357,
#Partially deleted in new
chr15	84980512	85139142	chr15:84980512-85139142	1	+	85064399	85137903	0	22	173,57,191,57,55,89,79,138,89,52,43,78,71,165,49,136,199,218,133,168,130,1346,	0,83857,86501,95349,96220,103043,108825,110531,117435,119502,119643,128540,132864,133360,134926,135471,137128,140284,142548,145694,156021,157284,
#Partially deleted in new
chr15	84981973	85139136	chr15:84981973-85139136	1	+	84982162	85137903	0	22	375,57,191,57,55,89,79,138,89,52,43,78,71,165,49,136,199,218,133,168,130,1340,	0,82396,85040,93888,94759,101582,107364,109070,115974,118041,118182,127079,131403,131899,133465,134010,135667,138823,141087,144233,154560,155823,
#Partially deleted in new
chr15	84981980	85138032	chr15:84981980-85138032	1	+	84982162	85137903	0	21	368,57,191,57,55,89,79,89,52,43,78,71,165,49,136,199,218,133,168,130,236,	0,82389,85033,93881,94752,101575,107357,115967,118034,118175,127072,131396,131892,133458,134003,135660,138816,141080,144226,154553,155816,
#Partially deleted in new
chr15	84981980	85138032	chr15:84981980-85138032	0	+	84982162	85091095	0	21	368,57,191,57,55,89,138,89,52,43,78,71,165,49,136,199,218,133,168,130,236,	0,82389,85033,93881,94752,101575,109063,115967,118034,118175,127072,131396,131892,133458,134003,135660,138816,141080,144226,154553,155816,
#Partially deleted in new
chr15	84981980	85138032	chr15:84981980-85138032	0	+	84982162	85090822	789624	23	368,57,191,57,55,89,79,198,138,89,52,43,78,71,165,49,136,199,218,133,168,130,236,	0,82389,85033,93881,94752,101575,107357,108737,109063,115967,118034,118175,127072,131396,131892,133458,134003,135660,138816,141080,144226,154553,155816,
#Partially deleted in new
chr15	84981980	85138032	chr15:84981980-85138032	0	+	84982162	85098008	789624	20	368,57,191,57,55,89,89,52,43,78,71,165,49,136,199,218,133,168,130,236,	0,82389,85033,93881,94752,101575,115967,118034,118175,127072,131396,131892,133458,134003,135660,138816,141080,144226,154553,155816,
#Partially deleted in new
chr15	84982225	85109130	chr15:84982225-85109130	0	+	84982225	85083565	789624	5	123,57,191,89,78,	0,82144,84788,101330,126827,
#Partially deleted in new
chr15	85062496	85138607	chr15:85062496-85138607	0	+	85062496	85062496	8553170	19	1930,191,57,55,89,89,52,43,78,71,165,49,136,199,218,133,168,130,811,	0,4517,13365,14236,21059,35451,37518,37659,46556,50880,51376,52942,53487,55144,58300,60564,63710,74037,75300,
#Partially deleted in new
chr15	85067027	85113400	chr15:85067027-85113400	0	+	85067027	85067027	8553170	8	177,57,55,89,52,43,78,24,	0,8834,9705,16528,32987,33128,42025,46349,
#Partially deleted in new
chr15	85097802	85114038	chr15:85097802-85114038	0	+	85097802	85097802	8553170	6	234,52,43,78,71,166,	0,2212,2353,11250,15574,16070,
#Partially deleted in new
chr15	85099756	85113956	chr15:85099756-85113956	0	+	85099756	85099756	8553170	5	310,43,78,71,84,	0,399,9296,13620,14116,
#Deleted in new
chr15	85099978	85100258	chr15:85099978-85100258	0	+	85099978	85099978	8553170	2	88,103,	0,177,
#Partially deleted in new
chr15	85115255	85116309	chr15:85115255-85116309	0	+	85115255	85115255	8553170	2	232,326,	0,728,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	85115768	85117832	chr15:85115768-85117832	0	+	85115768	85115768	8553170	2	351,192,	0,1872,
#Partially deleted in new
chr15	85120190	85139142	chr15:85120190-85139142	0	+	85120190	85120190	8553170	5	824,133,168,130,1346,	0,2870,6016,16343,17606,
#Partially deleted in new
chr15	85178627	85178806	chr15:85178627-85178806	7	-	85178627	85178627	16724991	1	179,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	85180199	85234711	chr15:85180199-85234711	7	-	85180199	85180199	16724991	7	1313,151,155,91,92,189,233,	0,27268,28575,28825,28999,29186,54279,
#Partially deleted in new
chr15	85181209	85182083	chr15:85181209-85182083	7	-	85181209	85181209	16724991	1	874,	0,
#Partially deleted in new
chr15	85191437	85202009	chr15:85191437-85202009	5	+	85191437	85191437	16724991	7	165,3505,487,171,199,133,193,	0,1832,6917,8014,9803,10103,10379,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	85196443	85213905	chr15:85196443-85213905	7	+	85196443	85196443	16724991	8	331,487,171,159,242,159,37,6204,	0,1911,3008,5373,7732,8860,10589,11258,
#Partially deleted in new
chr15	85205439	85234785	chr15:85205439-85234785	4	-	85205439	85205439	16724991	6	367,138,155,91,102,307,	0,2028,3335,3585,4033,29039,
#Partially deleted in new
chr15	85208476	85209871	chr15:85208476-85209871	5	-	85208476	85208476	16724991	6	208,155,91,92,189,42,	0,298,548,722,909,1353,
#Partially deleted in new
chr15	85208774	85234795	chr15:85208774-85234795	5	-	85208774	85208774	16724991	5	155,91,92,189,317,	0,250,424,611,25704,
#Partially deleted in new
chr15	85209064	85234785	chr15:85209064-85234785	4	-	85209064	85209064	16724991	5	51,92,189,89,307,	0,134,321,765,25414,
#Partially deleted in new
chr15	85209252	85234710	chr15:85209252-85234710	4	-	85209252	85209252	16724991	3	38,189,182,	0,133,25276,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	85210052	85210299	chr15:85210052-85210299	3	-	85210052	85210052	8553170	1	247,	0,
#Partially deleted in new
chr15	85240471	85247170	chr15:85240471-85247170	7	+	85240471	85240471	16724991	9	84,120,60,81,88,949,61,103,133,	0,1748,2490,2735,3480,3952,5167,6254,6566,
#Partially deleted in new
chr15	85255368	85270892	chr15:85255368-85270892	5	-	85255368	85255368	16724991	13	373,168,147,174,153,1404,214,127,142,245,122,134,208,	0,3152,4478,4705,5313,6405,8136,8817,11908,12331,13830,14856,15316,
#Partially deleted in new
chr15	85270303	85330228	chr15:85270303-85330228	4	-	85270303	85270303	16724991	4	55,170,177,151,	0,381,3688,59774,
#Deleted in new
chr15	85272526	85272974	chr15:85272526-85272974	7	+	85272526	85272526	16724991	2	166,202,	0,246,
#Deleted in new
chr15	85314666	85315516	chr15:85314666-85315516	4	-	85314666	85314666	16724991	2	318,152,	0,698,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	85326393	85330230	chr15:85326393-85330230	4	-	85326393	85326393	16724991	2	667,153,	0,3684,
#Deleted in new
chr15	85380570	85382170	chr15:85380570-85382170	0	+	85380570	85380570	8553170	2	228,484,	0,1116,
#Partially deleted in new
chr15	85380586	85684874	chr15:85380586-85684874	0	+	85485720	85684874	789624	15	212,44,148,297,184,199,3178,122,76,137,371,193,109,55,134,	0,105123,140841,152997,163185,194544,198343,205115,258787,265231,274830,283976,289135,301571,304154,
#Deleted in new
chr15	85380595	85380662	chr15:85380595-85380662	3	+	85380595	85380595	5263520	1	67,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	85380639	85536997	chr15:85380639-85536997	1	+	85485720	85533942	0	4	159,44,148,3414,	0,105070,140788,152944,
#Partially deleted in new
chr15	85380714	85749355	chr15:85380714-85749355	1	+	85485720	85744677	0	37	84,44,148,297,184,199,3178,122,76,137,371,54,193,109,55,133,175,68,67,136,113,153,251,126,118,249,77,182,83,195,159,71,45,51,450,334,4728,	0,104995,140713,152869,163057,194416,198215,204987,258659,265103,274702,277822,283848,289007,301443,304026,312562,327304,329864,335073,336575,337292,338361,341276,341515,342357,345695,346351,346666,349798,354277,354845,355375,359507,360331,362777,363913,
#Partially deleted in new
chr15	85380728	85745610	chr15:85380728-85745610	3	+	85485720	85744677	0	37	70,44,148,297,184,199,3178,122,76,137,371,66,193,109,55,133,175,68,67,136,113,153,251,126,118,249,77,182,83,195,159,71,45,51,450,334,983,	0,104981,140699,152855,163043,194402,198201,204973,258645,265089,274688,281659,283834,288993,301429,304012,312548,327290,329850,335059,336561,337278,338347,341262,341501,342343,345681,346337,346652,349784,354263,354831,355361,359493,360317,362763,363899,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	85380755	85521508	chr15:85380755-85521508	0	+	85485720	85521508	789624	4	43,154,44,81,	0,100117,104954,140672,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	85389822	85389884	chr15:85389822-85389884	3	-	85389822	85389822	8553170	1	62,	0,
#Deleted in new
chr15	85415227	85415633	chr15:85415227-85415633	7	+	85415227	85415227	16724991	1	406,	0,
#Partially deleted in new
chr15	85544039	85579184	chr15:85544039-85579184	0	+	85575305	85579184	789624	3	104,199,255,	0,31091,34890,
#Partially deleted in new
chr15	85555445	85579131	chr15:85555445-85579131	0	+	85555453	85579131	789624	3	46,199,202,	0,19685,23484,
#Deleted in new
chr15	85579045	85580178	chr15:85579045-85580178	3	-	85579045	85579045	8553170	2	794,159,	0,974,
#Partially deleted in new
chr15	85582909	85645917	chr15:85582909-85645917	0	+	85585703	85645917	789624	4	255,122,76,100,	0,2792,56464,62908,
#Partially deleted in new
chr15	85619622	85670948	chr15:85619622-85670948	3	-	85619622	85619622	8553170	2	396,264,	0,51062,
#Partially deleted in new
chr15	85619695	85727414	chr15:85619695-85727414	0	+	85620091	85727414	789624	21	477,76,137,371,193,109,55,133,175,68,64,136,113,153,251,126,118,249,77,182,34,	0,19678,26122,35721,44867,50026,62462,65045,73581,88323,90886,96092,97594,98311,99380,102295,102534,103376,106714,107370,107685,
#Partially deleted in new
chr15	85619949	85749358	chr15:85619949-85749358	1	+	85620091	85744677	789624	29	223,76,137,371,193,109,55,133,175,68,64,136,113,153,251,126,118,249,77,182,83,195,159,71,45,51,450,334,4731,	0,19424,25868,35467,44613,49772,62208,64791,73327,88069,90632,95838,97340,98057,99126,102041,102280,103122,106460,107116,107431,110563,115042,115610,116140,120272,121096,123542,124678,
#Partially deleted in new
chr15	85621263	85627689	chr15:85621263-85627689	3	-	85621263	85621263	8553170	3	253,189,126,	0,3205,6300,
#Partially deleted in new
chr15	85635096	85744677	chr15:85635096-85744677	1	+	85635096	85744677	789624	30	9,76,137,371,54,193,109,55,133,175,68,67,136,113,153,251,126,118,249,77,182,83,195,159,71,45,51,450,334,50,	0,4277,10721,20320,23440,29466,34625,47061,49644,58180,72922,75482,80691,82193,82910,83979,86894,87133,87975,91313,91969,92284,95416,99895,100463,100993,105125,105949,108395,109531,
#Partially deleted in new
chr15	85645918	85669828	chr15:85645918-85669828	0	+	85645918	85669828	789624	6	36,371,54,66,193,107,	0,9498,12618,16469,18644,23803,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	85651521	85651628	chr15:85651521-85651628	3	-	85651521	85651521	8553170	1	107,	0,
#Partially deleted in new
chr15	85677036	85693451	chr15:85677036-85693451	0	+	85684849	85693451	789624	4	62,55,133,175,	0,5121,7704,16240,
#Partially deleted in new
chr15	85682167	85685446	chr15:85682167-85685446	0	+	85682167	85682167	8553170	2	45,706,	0,2573,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	85683526	85684955	chr15:85683526-85684955	0	+	85683526	85683526	8553170	2	86,534,	0,895,
#Partially deleted in new
chr15	85689868	85715901	chr15:85689868-85715901	0	+	85690029	85715901	789624	5	236,175,68,67,114,	0,3408,18150,20710,25919,
#Partially deleted in new
chr15	85693098	85717348	chr15:85693098-85717348	0	+	85693098	85693098	8553170	5	353,68,67,136,59,	0,14920,17480,22689,24191,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	85701108	85702771	chr15:85701108-85702771	3	+	85701108	85701108	8553170	2	118,628,	0,1035,
#Partially deleted in new
chr15	85710442	85717391	chr15:85710442-85717391	0	+	85710442	85710442	8553170	3	203,136,102,	0,5345,6847,
#Partially deleted in new
chr15	85717151	85727247	chr15:85717151-85727247	0	+	85717151	85717151	8553170	8	251,147,251,126,118,249,77,182,	0,861,1924,4839,5078,5920,9258,9914,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	85718800	85719322	chr15:85718800-85719322	0	+	85718800	85718800	8553170	2	75,247,	0,275,
#Partially deleted in new
chr15	85719211	85722302	chr15:85719211-85722302	0	+	85719211	85719211	8553170	2	115,312,	0,2779,
#Deleted in new
chr15	85726114	85727227	chr15:85726114-85727227	3	-	85726114	85726114	8553170	2	333,236,	0,877,
#Partially deleted in new
chr15	85735598	85740562	chr15:85735598-85740562	0	+	85735598	85735598	8553170	3	32,45,341,	0,491,4623,
#Deleted in new
chr15	85747603	85749156	chr15:85747603-85749156	0	+	85747603	85747603	8553170	2	206,405,	0,1148,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	85750335	85752901	chr15:85750335-85752901	3	-	85750335	85750335	8553170	2	356,138,	0,2428,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	85754940	85756237	chr15:85754940-85756237	3	-	85754940	85754940	8553170	3	301,138,416,	0,577,881,
#Partially deleted in new
chr15	85759322	85795030	chr15:85759322-85795030	3	-	85768040	85769810	789624	3	1689,1804,265,	0,8694,35443,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	85759329	85764472	chr15:85759329-85764472	0	-	85759329	85759329	8553170	1	5143,	0,
#Partially deleted in new
chr15	85760616	85794918	chr15:85760616-85794918	0	-	85760616	85760616	8553170	2	395,153,	0,34149,
#Deleted in new
chr15	85770495	85770578	chr15:85770495-85770578	3	-	85770495	85770495	5263520	1	83,	0,
#Deleted in new
chr15	85770989	85771163	chr15:85770989-85771163	7	+	85770989	85770989	16724991	1	174,	0,
#Partially deleted in new
chr15	85821854	85821957	chr15:85821854-85821957	3	+	85821854	85821854	8553170	1	103,	0,
#Deleted in new
chr15	85958716	85958971	chr15:85958716-85958971	7	-	85958716	85958716	16724991	1	255,	0,
#Partially deleted in new
chr15	86078808	86086360	chr15:86078808-86086360	1	-	86078808	86078808	8553170	4	244,198,123,111,	0,955,1357,7441,
#Partially deleted in new
chr15	86079972	87029052	chr15:86079972-87029052	1	+	86079972	87028840	789624	25	51,64,147,132,94,38,209,166,68,117,581,84,87,149,88,145,154,181,130,132,177,63,164,102,228,	0,62031,63726,74457,78960,144941,167698,176880,177991,182805,184285,186401,187017,189946,191646,199666,215282,317393,442837,466029,474388,476250,594300,908014,948852,
#Partially deleted in new
chr15	86083344	86116717	chr15:86083344-86116717	3	-	86083344	86083344	789624	6	376,124,40,120,89,103,	0,2905,4959,24190,26428,33270,
#Partially deleted in new
chr15	86083430	86107641	chr15:86083430-86107641	0	-	86083430	86083430	8553170	2	290,107,	0,24104,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	86088107	86116705	chr15:86088107-86116705	0	-	86088107	86088107	8553170	4	236,120,147,125,	0,19427,21665,28473,
#Partially deleted in new
chr15	86105039	86116672	chr15:86105039-86116672	1	-	86105039	86105039	8553170	4	287,120,147,92,	0,2495,4733,11541,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	86138268	86138379	chr15:86138268-86138379	7	-	86138268	86138268	16724991	1	111,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	86139837	86140240	chr15:86139837-86140240	7	-	86139837	86139837	16724991	1	403,	0,
#Partially deleted in new
chr15	86143721	87028840	chr15:86143721-87028840	3	+	86143721	87028840	789624	23	124,132,94,38,209,166,68,117,581,84,87,149,88,145,154,181,130,132,177,63,164,102,16,	0,10708,15211,81192,103949,113131,114242,119056,120536,122652,123268,126197,127897,135917,151533,253644,379088,402280,410639,412501,530551,844265,885103,
#Deleted in new
chr15	86173197	86173270	chr15:86173197-86173270	3	-	86173197	86173197	8553170	1	73,	0,
#Partially deleted in new
chr15	86262624	86296215	chr15:86262624-86296215	0	+	86262624	86262624	8553170	9	43,117,581,84,87,149,88,145,961,	0,153,1633,3749,4365,7294,8994,17014,32630,
#Partially deleted in new
chr15	86262624	86295511	chr15:86262624-86295511	0	+	86262624	86262624	8553170	8	270,581,84,87,149,88,145,257,	0,1633,3749,4365,7294,8994,17014,32630,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	86295374	86916155	chr15:86295374-86916155	0	+	86295374	86907294	789624	6	34,181,130,132,164,9069,	0,101991,227435,250627,378898,611712,
#Partially deleted in new
chr15	86295648	86304981	chr15:86295648-86304981	1	-	86295648	86295648	8553170	3	1426,146,70,	0,4087,9263,
#Partially deleted in new
chr15	86296867	86316963	chr15:86296867-86316963	3	-	86296867	86296867	789624	4	207,173,251,234,	0,8044,15264,19862,
#Partially deleted in new
chr15	86305050	86317173	chr15:86305050-86317173	0	-	86305050	86305050	8553170	2	34,444,	0,11679,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	86630265	86631136	chr15:86630265-86631136	3	-	86630265	86630265	8553170	2	419,80,	0,791,
#Partially deleted in new
chr15	86932879	86946331	chr15:86932879-86946331	3	+	86932879	86932879	789624	3	90,111,150,	0,2203,13302,
#Partially deleted in new
chr15	86938796	86988426	chr15:86938796-86988426	3	-	86938796	86938796	789624	3	294,115,90,	0,855,49540,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	87474182	87474289	chr15:87474182-87474289	3	-	87474182	87474182	8553170	1	107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	87576928	87579866	chr15:87576928-87579866	3	+	87576928	87576928	789624	3	119,55,1792,	0,781,1146,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr15	87859750	88256747	chr15:87859750-88256747	3	-	87876934	88256153	0	19	17370,159,244,173,131,189,103,65,24,297,142,143,158,69,72,75,263,203,104,	0,20519,69440,73261,80872,173106,266520,267411,268960,275350,276148,276716,277653,287584,323667,324474,396155,396533,396893,
#Partially deleted in new
chr15	87876756	88256731	chr15:87876756-88256731	1	-	87876934	88256153	0	18	364,159,244,173,131,189,103,65,297,142,143,158,69,72,75,263,203,88,	0,3513,52434,56255,63866,156100,249514,250405,258344,259142,259710,260647,270578,306661,307468,379149,379527,379887,
#Partially deleted in new
chr15	87876756	88256731	chr15:87876756-88256731	1	-	87876934	88256153	0	19	364,159,42,244,173,131,189,103,65,297,142,143,158,69,72,75,263,203,88,	0,3513,8937,52434,56255,63866,156100,249514,250405,258344,259142,259710,260647,270578,306661,307468,379149,379527,379887,
#Partially deleted in new
chr15	87876756	88256731	chr15:87876756-88256731	1	-	87876934	88256153	0	20	364,159,42,244,173,131,189,103,65,24,297,142,143,158,69,72,75,263,203,88,	0,3513,8937,52434,56255,63866,156100,249514,250405,251954,258344,259142,259710,260647,270578,306661,307468,379149,379527,379887,
#Partially deleted in new
chr15	87876756	88256169	chr15:87876756-88256169	1	-	87876934	88256153	0	18	364,159,42,244,173,131,189,103,65,24,297,142,143,158,69,72,75,264,	0,3513,8937,52434,56255,63866,156100,249514,250405,251954,258344,259142,259710,260647,270578,306661,307468,379149,
#Partially deleted in new
chr15	87876788	88256153	chr15:87876788-88256153	1	-	87876934	88256153	789624	19	332,159,42,75,244,173,131,189,103,65,24,297,142,143,158,69,72,75,248,	0,3481,8905,31700,52402,56223,63834,156068,249482,250373,251922,258312,259110,259678,260615,270546,306629,307436,379117,
#Partially deleted in new
chr15	87876790	88256177	chr15:87876790-88256177	1	-	87876934	88256153	0	16	330,159,244,173,131,189,103,65,297,142,143,158,69,72,75,272,	0,3479,52400,56221,63832,156066,249480,250371,258310,259108,259676,260613,270544,306627,307434,379115,
#Partially deleted in new
chr15	87916261	87933090	chr15:87916261-87933090	0	-	87916538	87933090	789624	4	299,95,244,79,	0,9308,12929,16750,
#Partially deleted in new
chr15	87916272	88205933	chr15:87916272-88205933	1	-	87916545	88184253	789624	16	288,244,173,131,189,103,65,24,297,142,143,158,69,72,75,114,	0,12918,16739,24350,116584,209998,210889,212438,218828,219626,220194,221131,231062,267145,267952,289547,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr15	87926655	88256179	chr15:87926655-88256179	1	-	87929181	88256153	789624	14	2779,173,131,189,103,65,297,142,143,158,69,72,75,274,	0,6356,13967,106201,199615,200506,208445,209243,209811,210748,220679,256762,257569,329250,
#Partially deleted in new
chr15	87931081	87940735	chr15:87931081-87940735	0	-	87931081	87931081	8553170	3	155,173,113,	0,1930,9541,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr15	87977363	88256159	chr15:87977363-88256159	1	-	87979344	88256153	0	14	2100,135,189,103,65,24,297,142,143,158,69,72,75,254,	0,3862,55493,148907,149798,151347,157737,158535,159103,160040,169971,206054,206861,278542,
#Partially deleted in new
chr15	87977366	87978803	chr15:87977366-87978803	0	-	87977366	87977366	8553170	2	225,199,	0,1238,
#Partially deleted in new
chr15	87979053	88127191	chr15:87979053-88127191	0	-	88032925	88127191	789624	3	410,189,30,	0,53803,148108,
#Partially deleted in new
chr15	87979344	88256731	chr15:87979344-88256731	1	-	87979344	88256153	0	16	119,135,189,103,65,24,297,142,143,158,69,72,75,263,203,88,	0,1881,53512,146926,147817,149366,155756,156554,157122,158059,167990,204073,204880,276561,276939,277299,
#Partially deleted in new
chr15	88072423	88099265	chr15:88072423-88099265	0	-	88072423	88072423	8553170	3	176,133,263,	0,26105,26579,
#Partially deleted in new
chr15	88072550	88135938	chr15:88072550-88135938	0	-	88072550	88135938	789624	4	49,103,65,40,	0,53720,54611,63348,
#Partially deleted in new
chr15	88072600	88126361	chr15:88072600-88126361	0	-	88072600	88072600	8553170	2	307,91,	0,53670,
#Partially deleted in new
chr15	88131968	88136478	chr15:88131968-88136478	0	-	88131968	88131968	8553170	4	87,297,142,12,	0,3132,3930,4498,
#Partially deleted in new
chr15	88137460	88252622	chr15:88137460-88252622	0	-	88137460	88184253	789624	6	101,69,72,75,118,100,	0,9874,45957,46764,72505,115062,
#Deleted in new
chr15	88143934	88144165	chr15:88143934-88144165	7	-	88143934	88143934	16724991	1	231,	0,
#Partially deleted in new
chr15	88252729	88271066	chr15:88252729-88271066	3	+	88252729	88252729	789624	4	749,92,220,1602,	0,14051,15137,16735,
#Deleted in new
chr15	88255905	88256768	chr15:88255905-88256768	0	-	88255905	88255905	8553170	3	226,203,125,	0,378,738,
#Partially deleted in new
chr15	88459475	88467419	chr15:88459475-88467419	3	-	88459612	88467377	0	4	388,174,187,270,	0,5227,6111,7674,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	88459476	88465747	chr15:88459476-88465747	0	-	88459476	88459476	8553170	2	5400,161,	0,6110,
#Partially deleted in new
chr15	88459477	88464813	chr15:88459477-88464813	0	-	88460356	88464813	789624	3	386,230,111,	0,675,5225,
#Partially deleted in new
chr15	88459607	88467389	chr15:88459607-88467389	0	-	88464843	88467377	789624	3	256,174,240,	0,5095,7542,
#Partially deleted in new
chr15	88459716	88511521	chr15:88459716-88511521	0	-	88459716	88459716	8553170	4	147,174,187,90,	0,4986,5870,51715,
#Deleted in new
chr15	88465012	88467390	chr15:88465012-88467390	1	-	88465491	88467377	789624	2	761,241,	0,2137,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	88467452	88480773	chr15:88467452-88480773	3	+	88467717	88477979	0	6	330,117,99,130,66,2902,	0,455,5174,7657,9536,10419,
#Partially deleted in new
chr15	88467452	88478251	chr15:88467452-88478251	0	+	88467717	88476996	789624	6	330,117,99,68,66,380,	0,455,5174,7719,9536,10419,
#Deleted in new
chr15	88467677	88468258	chr15:88467677-88468258	0	+	88467677	88467677	8553170	2	105,348,	0,233,
#Partially deleted in new
chr15	88467704	88477904	chr15:88467704-88477904	0	+	88467704	88467704	8553170	5	78,117,210,66,33,	0,203,7325,9284,10167,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	88467705	88478263	chr15:88467705-88478263	0	+	88467705	88467705	8553170	6	77,1238,99,130,66,392,	0,202,4921,7404,9283,10166,
#Partially deleted in new
chr15	88467707	88472620	chr15:88467707-88472620	0	+	88467707	88467707	8553170	3	75,117,266,	0,200,4647,
#Partially deleted in new
chr15	88467717	88478259	chr15:88467717-88478259	1	+	88467717	88477979	0	5	65,117,130,66,388,	0,190,7392,9271,10154,
#Partially deleted in new
chr15	88467735	88478205	chr15:88467735-88478205	0	+	88467735	88467735	8553170	5	289,99,130,66,334,	0,4891,7374,9253,10136,
#Partially deleted in new
chr15	88467962	88472620	chr15:88467962-88472620	0	+	88467962	88467962	8553170	2	62,385,	0,4273,
#Partially deleted in new
chr15	88472506	88478267	chr15:88472506-88478267	0	+	88472506	88472506	8553170	3	219,130,396,	0,2603,5365,
#Deleted in new
chr15	88476724	88478267	chr15:88476724-88478267	0	+	88476724	88476724	8553170	2	330,396,	0,1147,
#Deleted in new
chr15	88477870	88478387	chr15:88477870-88478387	3	-	88477870	88477870	8553170	1	517,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	88494439	88546645	chr15:88494439-88546645	0	-	88531362	88531705	789624	9	224,113,155,790,192,188,851,103,106,	0,9435,16992,17911,22342,33159,36183,37173,52100,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	88501943	88505787	chr15:88501943-88505787	0	-	88501943	88501943	8553170	1	3844,	0,
#Partially deleted in new
chr15	88512482	88546675	chr15:88512482-88546675	3	-	88512950	88531705	789624	5	658,192,188,1093,136,	0,4299,15116,18140,34057,
#Partially deleted in new
chr15	88512482	88536334	chr15:88512482-88536334	1	-	88512950	88536334	789624	5	658,192,188,1093,23,	0,4299,15116,18140,23829,
#Partially deleted in new
chr15	88512482	88546660	chr15:88512482-88546660	0	-	88531362	88531705	789624	5	658,192,851,103,121,	0,4299,18140,19130,34057,
#Partially deleted in new
chr15	88512482	88546653	chr15:88512482-88546653	1	-	88512950	88536334	789624	6	658,192,188,1093,70,114,	0,4299,15116,18140,23829,34057,
#Partially deleted in new
chr15	88530772	88546634	chr15:88530772-88546634	1	-	88530965	88531705	789624	4	204,177,107,95,	0,524,836,15767,
#Partially deleted in new
chr15	88531867	88546337	chr15:88531867-88546337	0	-	88531867	88531867	8553170	2	61,100,	0,14370,
#Deleted in new
chr15	88568286	88568562	chr15:88568286-88568562	7	+	88568286	88568286	16724991	1	276,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	88585565	88604603	chr15:88585565-88604603	3	-	88585565	88585565	789624	3	1497,86,257,	0,17831,18781,
#Partially deleted in new
chr15	88586773	88605110	chr15:88586773-88605110	0	-	88586773	88586773	789624	3	289,86,247,	0,16623,18090,
#Partially deleted in new
chr15	88603382	88604059	chr15:88603382-88604059	0	-	88603382	88603382	8553170	2	100,89,	0,588,
#Deleted in new
chr15	88608106	88608197	chr15:88608106-88608197	3	+	88608106	88608106	5263520	1	91,	0,
#Deleted in new
chr15	88611824	88611934	chr15:88611824-88611934	3	+	88611824	88611824	5263520	1	110,	0,
#Deleted in new
chr15	88611846	88611924	chr15:88611846-88611924	3	-	88611846	88611846	5263520	1	78,	0,
#Partially deleted in new
chr15	88621295	88632282	chr15:88621295-88632282	3	+	88626209	88630294	789624	4	87,604,201,2225,	0,4850,7930,8762,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	88621336	88627341	chr15:88621336-88627341	0	+	88621336	88621336	8553170	2	46,1196,	0,4809,
#Partially deleted in new
chr15	88621369	88626746	chr15:88621369-88626746	0	+	88626209	88626746	789624	2	294,601,	0,4776,
#Partially deleted in new
chr15	88621380	88626611	chr15:88621380-88626611	0	+	88621380	88621380	8553170	2	417,466,	0,4765,
#Partially deleted in new
chr15	88621380	88626179	chr15:88621380-88626179	0	+	88621380	88621380	8553170	2	427,34,	0,4765,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	88626611	88632281	chr15:88626611-88632281	0	+	88626611	88626611	8553170	2	2815,2224,	0,3446,
#Partially deleted in new
chr15	88636152	88655621	chr15:88636152-88655621	3	+	88639366	88655531	0	4	140,252,201,207,	0,3190,15957,19262,
#Partially deleted in new
chr15	88636169	88637428	chr15:88636169-88637428	0	+	88636169	88636169	8553170	2	123,67,	0,1192,
#Partially deleted in new
chr15	88638742	88656483	chr15:88638742-88656483	1	+	88639366	88655531	0	4	334,252,201,1069,	0,600,13367,16672,
#Partially deleted in new
chr15	88638940	88650386	chr15:88638940-88650386	1	+	88639366	88650270	789624	3	136,252,152,	0,402,11294,
#Partially deleted in new
chr15	88638952	88655511	chr15:88638952-88655511	0	+	88639366	88655511	789624	4	124,252,141,97,	0,390,13217,16462,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	88638962	88655616	chr15:88638962-88655616	0	+	88638962	88638962	8553170	4	114,252,2076,202,	0,380,11272,16452,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	88639042	88655648	chr15:88639042-88655648	0	+	88639042	88639042	8553170	4	136,252,2076,234,	0,300,11192,16372,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	88646911	88655649	chr15:88646911-88655649	0	+	88646911	88646911	8553170	2	5399,235,	0,8503,
#Partially deleted in new
chr15	88647819	88652186	chr15:88647819-88652186	0	+	88647819	88647819	8553170	2	183,77,	0,4290,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	88650252	88655650	chr15:88650252-88655650	0	+	88650252	88650252	8553170	4	77,216,201,236,	0,1113,1857,5162,
#Partially deleted in new
chr15	88652035	88655625	chr15:88652035-88655625	0	+	88652035	88652035	8553170	2	275,206,	0,3384,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	88797412	88798734	chr15:88797412-88798734	3	-	88797412	88797412	8553170	2	492,79,	0,1243,
#Partially deleted in new
chr15	88803441	88875353	chr15:88803441-88875353	3	+	88836206	88874481	789624	19	368,77,384,175,128,294,378,175,128,294,240,4566,114,114,159,83,145,183,949,	0,32758,35221,36570,38298,39913,42063,43801,44469,45996,48352,51410,56884,64774,67940,68561,69439,70400,70963,
#Partially deleted in new
chr15	88803442	88875354	chr15:88803442-88875354	1	+	88836206	88874481	0	18	367,77,384,175,128,294,378,175,128,294,240,4566,114,159,83,145,183,950,	0,32757,35220,36569,38297,39912,42062,43800,44468,45995,48351,51409,56883,67939,68560,69438,70399,70962,
#Partially deleted in new
chr15	88803442	88875354	chr15:88803442-88875354	1	+	88836206	88874481	789624	18	367,77,384,175,128,294,378,175,128,294,240,670,3839,159,83,145,183,950,	0,32757,35220,36569,38297,39912,42062,43800,44468,45995,48351,51409,52136,67939,68560,69438,70399,70962,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	88803473	88851521	chr15:88803473-88851521	1	+	88836206	88849871	789624	10	336,77,384,175,128,294,378,175,128,2084,	0,32726,35189,36538,38266,39881,42031,43769,44437,45964,
#Partially deleted in new
chr15	88803758	88874653	chr15:88803758-88874653	1	+	88836206	88874481	0	16	51,77,384,175,128,294,378,175,128,294,240,4566,159,83,145,249,	0,32441,34904,36253,37981,39596,41746,43484,44152,45679,48035,51093,67623,68244,69122,70646,
#Partially deleted in new
chr15	88803758	88874572	chr15:88803758-88874572	1	+	88836206	88874481	0	17	51,77,384,175,128,294,378,175,128,294,240,4566,159,83,145,183,168,	0,32441,34904,36253,37981,39596,41746,43484,44152,45679,48035,51093,67623,68244,69122,70083,70646,
#Partially deleted in new
chr15	88836206	88874481	chr15:88836206-88874481	1	+	88836206	88874481	0	17	70,384,175,128,294,378,175,128,294,240,4566,114,159,83,145,183,77,	0,2456,3805,5533,7148,9298,11036,11704,13231,15587,18645,24119,35175,35796,36674,37635,38198,
#Deleted in new
chr15	88872968	88874841	chr15:88872968-88874841	0	+	88872968	88874599	789624	3	57,218,437,	0,873,1436,
#Deleted in new
chr15	88873712	88874841	chr15:88873712-88874841	0	+	88873712	88873712	8553170	2	312,437,	0,692,
#Partially deleted in new
chr15	88877287	88895626	chr15:88877287-88895626	3	-	88877969	88887298	789624	5	969,303,369,171,168,	0,1679,4069,9887,18171,
#Partially deleted in new
chr15	88877294	88895531	chr15:88877294-88895531	0	-	88880542	88887298	789624	6	962,303,1193,369,171,73,	0,1672,2123,4062,9880,18164,
#Partially deleted in new
chr15	88877830	88895597	chr15:88877830-88895597	1	-	88877969	88893112	789624	6	426,303,369,171,139,139,	0,1136,3526,9344,15143,17628,
#Partially deleted in new
chr15	88879118	88895533	chr15:88879118-88895533	0	-	88879118	88887298	789624	5	151,35,369,171,75,	0,299,2238,8056,16340,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	88881144	88895513	chr15:88881144-88895513	0	-	88881144	88881144	8553170	3	581,171,55,	0,6030,14314,
#Partially deleted in new
chr15	88898682	88913379	chr15:88898682-88913379	0	-	88912171	88913319	789624	9	850,156,185,145,153,182,132,53,133,	0,973,2868,7074,7943,8512,11109,13441,14564,
#Partially deleted in new
chr15	88898712	88913381	chr15:88898712-88913381	1	-	88899394	88913319	789624	7	820,185,145,153,182,132,135,	0,2838,7044,7913,8482,11079,14534,
#Partially deleted in new
chr15	88898713	88913411	chr15:88898713-88913411	3	-	88899394	88913319	789624	8	819,156,185,145,153,182,132,165,	0,942,2837,7043,7912,8481,11078,14533,
#Partially deleted in new
chr15	88898714	88913381	chr15:88898714-88913381	1	-	88899394	88913319	789624	9	443,158,156,185,145,153,182,132,135,	0,660,941,2836,7042,7911,8480,11077,14532,
#Partially deleted in new
chr15	88899297	88901960	chr15:88899297-88901960	0	-	88899297	88899297	8553170	3	235,156,410,	0,358,2253,
#Partially deleted in new
chr15	88899314	88913379	chr15:88899314-88913379	1	-	88899394	88913319	789624	7	218,156,185,145,153,182,133,	0,341,2236,6442,7311,7880,13932,
#Partially deleted in new
chr15	88901550	88913362	chr15:88901550-88913362	0	-	88901550	88913319	789624	6	121,145,153,182,132,116,	0,4206,5075,5644,8241,11696,
#Partially deleted in new
chr15	88902182	88906661	chr15:88902182-88906661	0	-	88904115	88906661	789624	4	49,226,145,36,	0,1754,3574,4443,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	88902182	88904646	chr15:88902182-88904646	0	-	88902182	88902182	8553170	1	2464,	0,
#Deleted in new
chr15	88903789	88904928	chr15:88903789-88904928	0	-	88903789	88903789	8553170	3	373,75,52,	0,918,1087,
#Deleted in new
chr15	88905381	88906716	chr15:88905381-88906716	0	-	88905381	88905381	8553170	2	520,91,	0,1244,
#Partially deleted in new
chr15	88905398	88913379	chr15:88905398-88913379	0	-	88905398	88905398	8553170	4	180,36,182,133,	0,1344,1796,7848,
#Partially deleted in new
chr15	88906062	88913379	chr15:88906062-88913379	0	-	88906062	88906062	8553170	3	716,182,133,	0,1132,7184,
#Deleted in new
chr15	88906614	88910125	chr15:88906614-88910125	0	-	88906614	88906614	8553170	3	164,182,334,	0,580,3177,
#Deleted in new
chr15	88909791	88910257	chr15:88909791-88910257	0	-	88909791	88909791	8553170	2	132,226,	0,240,
#Partially deleted in new
chr15	88910203	88913317	chr15:88910203-88913317	0	-	88910203	88910203	8553170	2	463,71,	0,3043,
#Partially deleted in new
chr15	88910779	88913362	chr15:88910779-88913362	0	-	88910779	88910779	8553170	2	319,116,	0,2467,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	88952682	88953460	chr15:88952682-88953460	7	+	88952682	88952682	16724991	2	253,217,	0,561,
#Deleted in new
chr15	88960069	88961046	chr15:88960069-88961046	7	+	88960069	88960069	16724991	1	977,	0,
#Partially deleted in new
chr15	88989518	88990245	chr15:88989518-88990245	7	-	88989518	88989518	16724991	1	727,	0,
#Partially deleted in new
chr15	89037976	89038286	chr15:89037976-89038286	7	-	89037976	89037976	16724991	1	310,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	89041222	89082819	chr15:89041222-89082819	3	+	89041222	89041222	8553170	4	78,101,89,329,	0,28868,34073,41268,
#Deleted in new
chr15	89087077	89087941	chr15:89087077-89087941	3	-	89087077	89087077	8553170	2	184,266,	0,598,
#Partially deleted in new
chr15	89087458	89155390	chr15:89087458-89155390	0	+	89116327	89155390	789624	5	58,100,200,176,24,	0,26266,28863,64218,67908,
#Deleted in new
chr15	89087562	89088267	chr15:89087562-89088267	1	-	89087562	89087562	8553170	2	379,81,	0,624,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	89088149	89202360	chr15:89088149-89202360	3	+	89116327	89195423	789624	11	414,100,200,176,168,184,93,111,70,85,7134,	0,25575,28172,63527,67217,87662,97274,100043,102930,105085,107077,
#Partially deleted in new
chr15	89088421	89113816	chr15:89088421-89113816	0	+	89088421	89088421	8553170	5	142,77,142,89,92,	0,14078,15481,15760,25303,
#Partially deleted in new
chr15	89088421	89116494	chr15:89088421-89116494	0	+	89116327	89116494	789624	4	142,142,100,173,	0,15481,25303,27900,
#Partially deleted in new
chr15	89088425	89151852	chr15:89088425-89151852	0	+	89116327	89151852	789624	6	138,142,89,100,200,176,	0,15477,15756,25299,27896,63251,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr15	89088429	89195751	chr15:89088429-89195751	1	+	89116327	89195423	789624	15	134,90,180,142,89,100,200,176,168,184,93,111,70,85,525,	0,1853,13967,15473,15752,25295,27892,63247,66937,87382,96994,99763,102650,104805,106797,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	89088481	89113791	chr15:89088481-89113791	0	+	89088481	89088481	8553170	6	82,77,142,89,133,60,	0,14018,15421,15700,17788,25250,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	89088509	89094364	chr15:89088509-89094364	0	+	89088509	89088509	8553170	2	54,733,	0,5122,
#Partially deleted in new
chr15	89116503	89183373	chr15:89116503-89183373	0	+	89116503	89116503	8553170	5	18,176,168,184,42,	0,35173,38863,59308,66828,
#Deleted in new
chr15	89120778	89120840	chr15:89120778-89120840	3	+	89120778	89120778	8553170	1	62,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	89135546	89136495	chr15:89135546-89136495	7	-	89135546	89135546	16724991	1	949,	0,
#Partially deleted in new
chr15	89185414	89193453	chr15:89185414-89193453	0	+	89185414	89185414	8553170	4	102,111,70,219,	0,2778,5665,7820,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	89201090	89201768	chr15:89201090-89201768	7	-	89201090	89201090	16724991	1	678,	0,
#Partially deleted in new
chr15	89209868	89221751	chr15:89209868-89221751	3	-	89210284	89218975	0	9	575,111,159,179,205,129,112,123,217,	0,830,1874,5191,7251,8696,9095,9868,11666,
#Deleted in new
chr15	89210001	89211843	chr15:89210001-89211843	0	-	89210284	89211843	789624	3	442,66,101,	0,697,1741,
#Partially deleted in new
chr15	89210749	89221614	chr15:89210749-89221614	0	-	89215162	89218975	789624	8	60,159,136,42,129,112,64,80,	0,993,4310,6533,7815,8214,9046,10785,
#Partially deleted in new
chr15	89219561	89221605	chr15:89219561-89221605	0	-	89219561	89219561	8553170	2	298,71,	0,1973,
#Partially deleted in new
chr15	89243948	89317261	chr15:89243948-89317261	3	+	89247647	89316459	789624	37	85,103,73,131,157,58,42,124,86,127,93,137,181,88,131,71,115,123,69,102,177,122,165,167,86,117,52,128,69,94,188,54,60,69,96,108,865,	0,3680,14755,16764,17636,17872,19470,19954,20573,24450,29428,30219,32762,34738,37221,37816,39187,41147,46264,47664,48739,48993,49884,55851,56351,57377,59915,61166,61392,61656,62058,63527,63664,68955,70663,71333,72448,
#Partially deleted in new
chr15	89243966	89317129	chr15:89243966-89317129	1	+	89247647	89316459	789624	38	67,103,73,131,157,58,42,124,86,127,93,137,181,88,131,71,115,123,69,102,177,122,165,180,167,86,117,52,128,69,94,188,54,60,69,96,108,733,	0,3662,14737,16746,17618,17854,19452,19936,20555,24432,29410,30201,32744,34720,37203,37798,39169,41129,46246,47646,48721,48975,49866,50948,55833,56333,57359,59897,61148,61374,61638,62040,63509,63646,68937,70645,71315,72430,
#Partially deleted in new
chr15	89243972	89260765	chr15:89243972-89260765	0	+	89243972	89243972	8553170	4	61,98,73,53,	0,3656,14731,16740,
#Partially deleted in new
chr15	89243974	89261847	chr15:89243974-89261847	0	+	89247647	89261847	789624	6	93,103,73,131,157,27,	0,3654,14729,16738,17610,17846,
#Partially deleted in new
chr15	89243989	89264037	chr15:89243989-89264037	0	+	89247647	89264037	789624	8	55,103,73,131,157,58,42,135,	0,3639,14714,16723,17595,17831,19429,19913,
#Partially deleted in new
chr15	89244003	89316481	chr15:89244003-89316481	0	+	89247647	89312908	789624	36	30,103,73,131,157,58,42,124,86,127,93,137,181,88,131,71,115,123,69,102,177,122,165,167,86,117,52,128,69,94,54,60,69,96,108,85,	0,3625,14700,16709,17581,17817,19415,19899,20518,24395,29373,30164,32707,34683,37166,37761,39132,41092,46209,47609,48684,48938,49829,55796,56296,57322,59860,61111,61337,61601,63472,63609,68900,70608,71278,72393,
#Partially deleted in new
chr15	89244007	89259068	chr15:89244007-89259068	0	+	89244007	89244007	8553170	3	60,103,365,	0,3621,14696,
#Partially deleted in new
chr15	89244033	89264004	chr15:89244033-89264004	0	+	89247647	89264004	789624	8	34,103,73,131,157,58,42,102,	0,3595,14670,16679,17551,17787,19385,19869,
#Partially deleted in new
chr15	89244249	89314646	chr15:89244249-89314646	0	+	89244249	89244249	8553170	4	31,98,69,35,	0,3379,68654,70362,
#Partially deleted in new
chr15	89247601	89259350	chr15:89247601-89259350	0	+	89247601	89247601	8553170	2	130,647,	0,11102,
#Partially deleted in new
chr15	89261837	89268631	chr15:89261837-89268631	0	+	89261837	89268543	789624	5	41,42,124,86,233,	0,1581,2065,2684,6561,
#Partially deleted in new
chr15	89263436	89316444	chr15:89263436-89316444	0	+	89263436	89316444	789624	31	24,124,86,127,93,137,181,88,131,71,115,123,69,102,177,122,165,167,86,117,52,128,69,94,185,54,60,69,96,108,48,	0,466,1085,4962,9940,10731,13274,15250,17733,18328,19699,21659,26776,28176,29251,29505,30396,36363,36863,37889,40427,41678,41904,42168,42573,44039,44176,49467,51175,51845,52960,
#Partially deleted in new
chr15	89278686	89317128	chr15:89278686-89317128	0	+	89278686	89278686	8553170	24	88,131,1486,123,69,102,177,122,165,180,167,86,117,52,128,69,94,188,54,60,69,96,108,732,	0,2483,3078,6409,11526,12926,14001,14255,15146,16228,21113,21613,22639,25177,26428,26654,26918,27320,28789,28926,34217,35925,36595,37710,
#Partially deleted in new
chr15	89282992	89290592	chr15:89282992-89290592	0	+	89282992	89282992	8553170	3	258,123,380,	0,2103,7220,
#Partially deleted in new
chr15	89305197	89316778	chr15:89305197-89316778	0	-	89316750	89316778	789624	2	27,73,	0,11508,
#Partially deleted in new
chr15	89307858	89316426	chr15:89307858-89316426	0	+	89307858	89307858	8553170	5	234,69,96,108,30,	0,5045,6753,7423,8538,
#Partially deleted in new
chr15	89316304	89334847	chr15:89316304-89334847	3	-	89316750	89333754	0	23	523,161,209,169,123,247,136,118,54,161,108,87,121,237,127,152,183,80,147,168,196,818,175,	0,1071,2236,2626,2923,4461,4820,5431,5657,6437,7099,7510,7802,9145,10307,10607,10862,12151,12380,12638,13776,16791,18368,
#Partially deleted in new
chr15	89316304	89334817	chr15:89316304-89334817	0	-	89332259	89333754	789624	24	523,161,209,169,123,247,136,118,54,161,149,87,121,237,127,152,183,80,147,168,196,157,818,145,	0,1071,2236,2626,2923,4461,4820,5431,5657,6437,7099,7510,7802,9145,10307,10607,10862,12151,12380,12638,13776,15913,16791,18368,
#Partially deleted in new
chr15	89316319	89334861	chr15:89316319-89334861	1	-	89316750	89333754	0	23	508,161,209,169,123,247,136,118,54,161,108,87,121,237,127,152,183,80,147,168,196,818,177,	0,1056,2221,2611,2908,4446,4805,5416,5642,6422,7084,7495,7787,9130,10292,10592,10847,12136,12365,12623,13761,16776,18365,
#Deleted in new
chr15	89316327	89320830	chr15:89316327-89320830	0	-	89318012	89320830	789624	7	500,161,99,209,169,123,65,	0,1048,1611,2213,2603,2900,4438,
#Partially deleted in new
chr15	89316329	89329037	chr15:89316329-89329037	0	-	89316750	89329037	789624	20	498,101,209,169,123,247,136,118,54,161,108,87,121,237,127,152,183,80,147,95,	0,1046,2211,2601,2898,4436,4795,5406,5632,6412,7074,7485,7777,9120,10282,10582,10837,12126,12355,12613,
#Deleted in new
chr15	89316338	89325559	chr15:89316338-89325559	0	-	89319401	89325559	789624	14	489,161,209,169,181,247,136,118,54,161,108,87,121,110,	0,1037,2202,2592,2889,4427,4786,5397,5623,6403,7065,7476,7768,9111,
#Deleted in new
chr15	89316356	89327336	chr15:89316356-89327336	0	-	89324171	89327336	789624	17	471,161,99,209,169,123,495,118,54,161,108,87,121,197,127,152,170,	0,1019,1582,2184,2574,2871,4409,5379,5605,6385,7047,7458,7750,9133,10255,10555,10810,
#Deleted in new
chr15	89316516	89317828	chr15:89316516-89317828	0	-	89316516	89316516	8553170	2	311,453,	0,859,
#Partially deleted in new
chr15	89316683	89334824	chr15:89316683-89334824	0	-	89327063	89333754	789624	24	144,161,37,209,169,123,247,136,118,54,161,108,87,121,237,127,168,183,80,147,168,196,818,152,	0,692,1255,1857,2247,2544,4082,4441,5052,5278,6058,6720,7131,7423,8766,9928,10228,10483,11772,12001,12259,13397,16412,17989,
#Deleted in new
chr15	89317442	89318009	chr15:89317442-89318009	0	-	89317442	89317442	8553170	2	29,71,	0,496,
#Deleted in new
chr15	89319063	89319379	chr15:89319063-89319379	0	-	89319063	89319063	8553170	3	36,35,29,	0,164,287,
#Deleted in new
chr15	89319267	89323427	chr15:89319267-89323427	0	-	89320847	89323427	789624	4	83,104,161,24,	0,1498,3474,4136,
#Deleted in new
chr15	89319337	89320801	chr15:89319337-89320801	0	-	89319337	89320801	789624	2	64,36,	0,1428,
#Deleted in new
chr15	89320819	89323437	chr15:89320819-89323437	0	-	89321247	89323437	789624	4	193,136,161,34,	0,305,1922,2584,
#Deleted in new
chr15	89321774	89325600	chr15:89321774-89325600	0	-	89321774	89321774	8553170	5	241,108,87,121,151,	0,1629,2040,2332,3675,
#Deleted in new
chr15	89322741	89326705	chr15:89322741-89326705	0	-	89322741	89326705	789624	5	161,87,121,237,94,	0,1073,1365,2708,3870,
#Deleted in new
chr15	89322804	89325587	chr15:89322804-89325587	0	-	89324171	89325587	789624	5	98,108,87,81,138,	0,599,1010,1302,2645,
#Deleted in new
chr15	89323513	89325484	chr15:89323513-89325484	0	-	89323513	89323513	8553170	3	388,121,35,	0,593,1936,
#Deleted in new
chr15	89323519	89324291	chr15:89323519-89324291	0	-	89323519	89323519	8553170	2	382,185,	0,587,
#Deleted in new
chr15	89326738	89326810	chr15:89326738-89326810	3	-	89326738	89326738	5263520	1	72,	0,
#Partially deleted in new
chr15	89327012	89328712	chr15:89327012-89328712	0	-	89327012	89327012	8553170	3	337,80,28,	0,1443,1672,
#Deleted in new
chr15	89330207	89333809	chr15:89330207-89333809	1	-	89330207	89333809	8553170	2	69,714,	0,2888,
#Deleted in new
chr15	89330210	89333144	chr15:89330210-89333144	0	-	89330210	89333144	789624	2	51,49,	0,2885,
#Deleted in new
chr15	89333792	89334013	chr15:89333792-89334013	0	-	89333792	89333792	8553170	2	35,65,	0,156,
#Partially deleted in new
chr15	89333849	89334444	chr15:89333849-89334444	0	-	89333849	89333849	8553170	2	64,78,	0,517,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	89335052	89336161	chr15:89335052-89336161	3	+	89335052	89335052	8553170	1	1109,	0,
#Deleted in new
chr15	89335270	89336161	chr15:89335270-89336161	1	+	89335270	89335270	8553170	2	99,513,	0,378,
#Deleted in new
chr15	89358840	89360377	chr15:89358840-89360377	3	+	89358840	89358840	8553170	1	1537,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	89361578	89398487	chr15:89361578-89398487	1	+	89361578	89361578	789624	7	691,124,222,65,78,138,3460,	0,16463,17469,26238,26925,27766,33449,
#Partially deleted in new
chr15	89362473	89379232	chr15:89362473-89379232	0	+	89362473	89362473	8553170	3	262,124,185,	0,15568,16574,
#Partially deleted in new
chr15	89362486	89395331	chr15:89362486-89395331	0	+	89362486	89362486	789624	6	245,124,65,81,138,304,	0,15555,25330,26014,26858,32541,
#Deleted in new
chr15	89368016	89368106	chr15:89368016-89368106	3	+	89368016	89368016	5263520	1	90,	0,
#Partially deleted in new
chr15	89369154	89387843	chr15:89369154-89387843	0	+	89369154	89369154	8553170	4	203,124,222,27,	0,8887,9893,18662,
#Partially deleted in new
chr15	89378048	89395313	chr15:89378048-89395313	2	+	89378048	89378048	8553170	4	117,65,138,286,	0,9768,11296,16979,
#Partially deleted in new
chr15	89378099	89395123	chr15:89378099-89395123	0	+	89378099	89378099	8553170	6	66,108,65,78,138,96,	0,9331,9717,10404,11245,16928,
#Partially deleted in new
chr15	89378115	89396240	chr15:89378115-89396240	0	+	89378115	89378115	789624	7	50,222,108,65,81,138,1213,	0,932,9315,9701,10385,11229,16912,
#Partially deleted in new
chr15	89378130	89395269	chr15:89378130-89395269	0	+	89378130	89378130	8553170	5	35,65,81,138,242,	0,9686,10370,11214,16897,
#Partially deleted in new
chr15	89378562	89388514	chr15:89378562-89388514	0	+	89378562	89378562	8553170	3	707,65,14,	0,9254,9938,
#Partially deleted in new
chr15	89379123	89395119	chr15:89379123-89395119	0	+	89379123	89379123	8553170	6	146,65,50,78,138,92,	0,8693,8918,9380,10221,15904,
#Partially deleted in new
chr15	89382499	89395040	chr15:89382499-89395040	1	+	89382499	89382499	8553170	7	98,114,108,65,243,138,13,	0,4289,4931,5317,6004,6845,12528,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	89386595	89396240	chr15:89386595-89396240	1	+	89386595	89386595	8553170	4	1286,81,138,1213,	0,1905,2749,8432,
#Partially deleted in new
chr15	89471397	89496571	chr15:89471397-89496571	0	-	89477556	89496544	789624	11	458,142,74,125,61,138,167,148,151,187,211,	0,1324,5357,5684,6119,6439,7924,8863,11669,15401,24963,
#Partially deleted in new
chr15	89471406	89496613	chr15:89471406-89496613	3	-	89472734	89496544	0	11	449,153,74,125,137,138,167,148,151,187,253,	0,1304,5348,5675,6110,6430,7915,8854,11660,15392,24954,
#Partially deleted in new
chr15	89471423	89496583	chr15:89471423-89496583	0	-	89476785	89496544	8553170	11	432,153,74,99,137,138,167,148,151,187,223,	0,1287,5331,5658,6093,6413,7898,8837,11643,15375,24937,
#Partially deleted in new
chr15	89471444	89479430	chr15:89471444-89479430	0	-	89472734	89479430	789624	7	278,153,74,125,137,138,109,	0,1266,5310,5637,6072,6392,7877,
#Partially deleted in new
chr15	89471756	89496582	chr15:89471756-89496582	0	-	89477913	89496544	789624	10	99,153,74,125,137,138,167,103,187,222,	0,954,4998,5325,5760,6080,7565,11358,15042,24604,
#Partially deleted in new
chr15	89477727	89496589	chr15:89477727-89496589	0	-	89486489	89496544	789624	7	247,167,148,151,259,187,229,	0,1594,2533,5339,8543,9071,18633,
#Partially deleted in new
chr15	89477798	89479736	chr15:89477798-89479736	0	-	89477798	89477798	8553170	2	176,415,	0,1523,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	89505276	89523753	chr15:89505276-89523753	0	-	89505276	89505276	8553170	3	582,51,173,	0,4796,18304,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	89505276	89524034	chr15:89505276-89524034	3	-	89505276	89505276	789624	4	582,51,36,454,	0,4796,12125,18304,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	89505277	89523753	chr15:89505277-89523753	0	-	89505277	89505277	8553170	3	501,51,173,	0,4795,18303,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	89508960	89510416	chr15:89508960-89510416	3	+	89508960	89508960	8553170	1	1456,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	89514587	89524016	chr15:89514587-89524016	0	-	89514587	89514587	8553170	3	246,154,436,	0,2696,8993,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	89518522	89591956	chr15:89518522-89591956	3	+	89518522	89518522	8553170	2	47,454,	0,72980,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr15	89575481	89628023	chr15:89575481-89628023	3	+	89575586	89627086	789624	22	759,280,242,235,130,140,219,152,101,94,80,240,97,58,147,91,59,135,158,2164,126,1068,	0,7204,8804,10226,16565,18933,19911,23842,25103,25816,26007,26255,27314,31286,33321,40923,42670,44226,45911,48141,50454,51474,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr15	89575586	89628012	chr15:89575586-89628012	1	+	89575586	89627086	789624	22	654,280,239,235,130,140,219,152,101,94,80,240,97,58,147,91,59,135,158,2164,126,1057,	0,7099,8702,10121,16460,18828,19806,23737,24998,25711,25902,26150,27209,31181,33216,40818,42565,44121,45806,48036,50349,51369,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	89579764	89582297	chr15:89579764-89582297	3	-	89579764	89579764	8553170	2	373,86,	0,2447,
#Partially deleted in new
chr15	89608788	89628780	chr15:89608788-89628780	0	-	89608788	89608788	8553170	3	180,167,180,	0,9240,19812,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	89625399	89631056	chr15:89625399-89631056	0	+	89625399	89627086	789624	4	387,126,227,1627,	0,536,1556,4030,
#Partially deleted in new
chr15	89627976	89655451	chr15:89627976-89655451	3	-	89628418	89652930	0	19	810,147,199,207,216,177,126,198,203,153,116,134,228,117,520,394,201,352,53,	0,999,1398,2310,3518,4843,5164,5709,14226,17036,17359,17916,18853,19619,20278,20997,21764,24626,27422,
#Partially deleted in new
chr15	89648502	89655451	chr15:89648502-89655451	0	-	89649928	89652930	789624	5	272,394,304,352,53,	0,471,1238,4100,6896,
#Partially deleted in new
chr15	89664364	89679402	chr15:89664364-89679402	1	-	89665582	89677489	789624	9	1578,246,192,173,265,83,205,59,152,	0,2571,3237,5135,5615,7117,8845,13080,14886,
#Deleted in new
chr15	89664366	89667640	chr15:89664366-89667640	0	-	89664842	89667640	789624	3	575,84,39,	0,2731,3235,
#Partially deleted in new
chr15	89664371	89679427	chr15:89664371-89679427	3	-	89665582	89677489	789624	9	1571,246,192,173,265,83,205,59,106,	0,2564,3230,5128,5608,7110,8838,13073,14950,
#Partially deleted in new
chr15	89676625	89679417	chr15:89676625-89679417	0	-	89676625	89676625	8553170	2	878,96,	0,2696,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	89677763	89690782	chr15:89677763-89690782	0	-	89677763	89677763	8553170	3	169,271,206,	0,3506,12813,
#Partially deleted in new
chr15	89681304	89690753	chr15:89681304-89690753	1	-	89681517	89690632	789624	3	236,116,177,	0,5126,9272,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	89681530	89690782	chr15:89681530-89690782	3	-	89683376	89690632	789624	3	2418,116,206,	0,4900,9046,
#Partially deleted in new
chr15	89683079	89690662	chr15:89683079-89690662	1	-	89683376	89690632	789624	3	776,116,86,	0,3351,7497,
#Partially deleted in new
chr15	89683250	89690783	chr15:89683250-89690783	1	-	89683905	89690632	789624	2	698,207,	0,7326,
#Partially deleted in new
chr15	89687936	89688243	chr15:89687936-89688243	7	-	89687936	89687936	16724991	1	307,	0,
#Partially deleted in new
chr15	89690796	89743638	chr15:89690796-89743638	3	+	89701746	89743391	789624	17	61,343,193,65,79,116,39,85,172,71,87,120,214,64,157,196,347,	0,10910,12153,14757,21229,24183,26114,31258,36360,38226,38886,40646,42209,44693,46776,47244,52495,
#Partially deleted in new
chr15	89690828	89743638	chr15:89690828-89743638	1	+	89701746	89743391	789624	17	29,343,193,65,79,116,39,85,172,71,87,120,130,64,157,196,347,	0,10878,12121,14725,21197,24151,26082,31226,36328,38194,38854,40614,42261,44661,46744,47212,52463,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	89690843	89704478	chr15:89690843-89704478	1	+	89701746	89703168	789624	3	14,343,1529,	0,10863,12106,
#Deleted in new
chr15	89704664	89705415	chr15:89704664-89705415	3	+	89704664	89704664	8553170	2	336,113,	0,638,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	89714231	89714338	chr15:89714231-89714338	3	+	89714231	89714231	8553170	1	107,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	89719605	89729730	chr15:89719605-89729730	0	+	89719605	89719605	8553170	6	22,162,85,172,71,48,	0,1643,2449,7551,9417,10077,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	89721109	89743637	chr15:89721109-89743637	0	+	89721109	89721109	8553170	11	301,85,172,71,87,120,214,64,157,196,346,	0,945,6047,7913,8573,10333,11896,14380,16463,16931,22182,
#Deleted in new
chr15	89748660	89751310	chr15:89748660-89751310	3	-	89750143	89751231	789624	2	1567,802,	0,1848,
#Deleted in new
chr15	89749890	89751137	chr15:89749890-89751137	0	-	89749890	89749890	8553170	2	337,114,	0,1133,
#Partially deleted in new
chr15	89752295	89753493	chr15:89752295-89753493	7	+	89752295	89752295	16724991	2	449,429,	0,769,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	89760590	89778754	chr15:89760590-89778754	1	+	89764890	89778334	789624	3	48,121,690,	0,4209,17474,
#Partially deleted in new
chr15	89760600	89778674	chr15:89760600-89778674	0	+	89760600	89760600	8553170	2	38,610,	0,17464,
#Partially deleted in new
chr15	89776357	89778754	chr15:89776357-89778754	3	+	89776357	89778334	789624	2	924,690,	0,1707,
#Partially deleted in new
chr15	89784888	89814862	chr15:89784888-89814862	3	-	89785348	89806583	0	21	613,82,141,168,111,92,148,56,134,77,173,66,66,144,114,155,127,140,143,837,91,	0,5571,6064,7271,7563,8146,12686,14371,14537,16222,16546,18350,18553,18758,19000,19364,19602,20189,20432,21081,29883,
#Partially deleted in new
chr15	89790952	89793187	chr15:89790952-89793187	0	-	89790952	89790952	8553170	4	141,168,111,153,	0,1207,1499,2082,
#Partially deleted in new
chr15	89797444	89799560	chr15:89797444-89799560	0	-	89797444	89797444	8553170	3	278,56,135,	0,1815,1981,
#Partially deleted in new
chr15	89797574	89802736	chr15:89797574-89802736	0	-	89797574	89797574	8553170	6	148,56,134,77,173,330,	0,1685,1851,3536,3860,4832,
#Partially deleted in new
chr15	89797658	89803969	chr15:89797658-89803969	0	-	89803261	89803969	789624	9	64,56,134,77,173,66,66,179,81,	0,1601,1767,3452,3776,5580,5783,5953,6230,
#Deleted in new
chr15	89803984	89804851	chr15:89803984-89804851	0	-	89803984	89803984	8553170	3	18,155,361,	0,268,506,
#Deleted in new
chr15	89804276	89805372	chr15:89804276-89805372	0	-	89805071	89805372	789624	4	131,127,272,52,	0,214,669,1044,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	89806272	89815401	chr15:89806272-89815401	0	-	89806272	89806583	789624	2	534,129,	0,9000,
#Partially deleted in new
chr15	89806400	89814864	chr15:89806400-89814864	0	-	89806400	89806583	789624	2	545,93,	0,8371,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	89830598	89894342	chr15:89830598-89894342	3	-	89835514	89893949	789624	6	5045,108,72,112,92,462,	0,7016,40876,57922,58450,63282,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	89834307	89912882	chr15:89834307-89912882	3	-	89835514	89912835	789624	10	1336,108,72,112,92,164,207,133,76,139,	0,3307,37167,54213,54741,68908,69469,73972,76436,78436,
#Partially deleted in new
chr15	89834981	89893977	chr15:89834981-89893977	0	-	89877322	89893949	789624	7	662,108,72,119,112,92,97,	0,2633,36493,42324,53539,54067,58899,
#Partially deleted in new
chr15	89835423	89837954	chr15:89835423-89837954	0	-	89835423	89835423	8553170	2	220,340,	0,2191,
#Partially deleted in new
chr15	89835439	89893994	chr15:89835439-89893994	1	-	89835514	89893949	789624	7	204,108,72,36,112,92,114,	0,2175,36035,42825,53081,53609,58441,
#Partially deleted in new
chr15	89835479	89893981	chr15:89835479-89893981	1	-	89835495	89893949	789624	6	34,108,72,112,92,101,	0,2135,35995,53041,53569,58401,
#Partially deleted in new
chr15	89835565	89845774	chr15:89835565-89845774	0	-	89835565	89835565	8553170	4	78,108,98,456,	0,2049,2463,9753,
#Partially deleted in new
chr15	89835567	89893994	chr15:89835567-89893994	0	-	89889078	89893949	789624	6	76,108,72,112,92,118,	0,2047,35907,52953,53481,58309,
#Partially deleted in new
chr15	89835593	89894028	chr15:89835593-89894028	0	-	89889094	89893949	789624	6	50,108,72,112,88,148,	0,2021,35881,52927,53455,58287,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	89835596	89849007	chr15:89835596-89849007	0	-	89835596	89835596	8553170	3	47,108,415,	0,2018,12996,
#Partially deleted in new
chr15	89835599	89888653	chr15:89835599-89888653	0	-	89835599	89835599	8553170	4	44,108,72,133,	0,2015,35875,52921,
#Partially deleted in new
chr15	89837614	89893994	chr15:89837614-89893994	0	-	89877322	89893949	789624	7	108,72,119,36,112,92,114,	0,33860,39691,40650,50906,51434,56266,
#Partially deleted in new
chr15	89837617	89852656	chr15:89837617-89852656	0	-	89837617	89837617	8553170	2	105,296,	0,14743,
#Partially deleted in new
chr15	89837621	89908399	chr15:89837621-89908399	0	-	89837621	89908292	789624	5	101,72,164,207,120,	0,33853,65594,66155,70658,
#Partially deleted in new
chr15	89837621	89908413	chr15:89837621-89908413	0	-	89837621	89908292	789624	6	101,72,112,92,164,134,	0,33853,50899,51427,65594,70658,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	89850636	89850721	chr15:89850636-89850721	3	-	89850636	89850636	5263520	1	85,	0,
#Partially deleted in new
chr15	89865458	89893970	chr15:89865458-89893970	0	-	89865458	89865458	8553170	5	235,72,112,92,90,	0,6016,23062,23590,28422,
#Partially deleted in new
chr15	89865460	89903365	chr15:89865460-89903365	0	-	89865460	89865460	8553170	5	233,72,112,92,150,	0,6014,23060,23588,37755,
#Partially deleted in new
chr15	89865612	89893977	chr15:89865612-89893977	0	-	89877322	89893949	789624	6	81,72,119,112,92,97,	0,5862,11693,22908,23436,28268,
#Deleted in new
chr15	89876539	89877285	chr15:89876539-89877285	7	+	89876539	89876539	16724991	1	746,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	89886484	89886591	chr15:89886484-89886591	3	-	89886484	89886484	8553170	1	107,	0,
#Partially deleted in new
chr15	89888520	89889479	chr15:89888520-89889479	0	-	89888520	89888520	8553170	2	112,431,	0,528,
#Deleted in new
chr15	89893077	89894638	chr15:89893077-89894638	1	-	89893757	89893949	789624	1	1561,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	89895005	89912956	chr15:89895005-89912956	3	-	89901794	89912835	0	6	6798,164,207,133,76,213,	0,8210,8771,13274,15738,17738,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	89897575	89897637	chr15:89897575-89897637	3	+	89897575	89897575	8553170	1	62,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	89900874	89912687	chr15:89900874-89912687	1	-	89901794	89908292	789624	6	929,164,207,133,76,636,	0,2341,2902,7405,9869,11177,
#Deleted in new
chr15	89902848	89903943	chr15:89902848-89903943	0	-	89903137	89903943	789624	2	531,167,	0,928,
#Deleted in new
chr15	89936491	89937005	chr15:89936491-89937005	7	+	89936491	89936491	16724991	1	514,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	89950759	89951345	chr15:89950759-89951345	3	+	89950759	89950759	8553170	1	586,	0,
#Partially deleted in new
chr15	90001391	90082200	chr15:90001391-90082200	3	+	90067137	90079829	789624	5	223,1486,192,175,2541,	0,65718,71679,72724,78268,
#Partially deleted in new
chr15	90002485	90067374	chr15:90002485-90067374	0	+	90067137	90067374	789624	2	67,265,	0,64624,
#Deleted in new
chr15	90006754	90006841	chr15:90006754-90006841	3	+	90006754	90006754	5263520	1	87,	0,
#Deleted in new
chr15	90024954	90026003	chr15:90024954-90026003	3	+	90024954	90024954	8553170	1	1049,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	90068013	90074532	chr15:90068013-90074532	0	+	90068013	90074505	789624	3	582,192,417,	0,5057,6102,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	90068305	90074536	chr15:90068305-90074536	0	+	90068305	90074505	789624	3	290,65,158,	0,4765,6073,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	90074511	90076644	chr15:90074511-90076644	3	-	90074511	90074511	8553170	1	2133,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	90074514	90082207	chr15:90074514-90082207	1	-	90074514	90074514	789624	2	399,769,	0,6924,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	90076423	90076486	chr15:90076423-90076486	3	+	90076423	90076423	8553170	1	63,	0,
#Deleted in new
chr15	90081461	90082206	chr15:90081461-90082206	0	+	90081461	90081461	8553170	2	89,437,	0,308,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	90083044	90102504	chr15:90083044-90102504	3	-	90084265	90102390	0	11	1309,93,98,113,152,137,144,161,166,92,229,	0,1771,1956,2230,4067,4394,5314,5542,7434,8508,19231,
#Partially deleted in new
chr15	90083995	90102468	chr15:90083995-90102468	0	-	90088745	90102390	789624	9	358,93,98,113,152,137,144,161,193,	0,820,1005,1279,3116,3443,4363,4591,18280,
#Partially deleted in new
chr15	90084013	90102477	chr15:90084013-90102477	1	-	90084265	90102390	789624	8	340,98,113,152,137,144,92,202,	0,987,1261,3098,3425,4345,7539,18262,
#Partially deleted in new
chr15	90084176	90100695	chr15:90084176-90100695	1	-	90084265	90091603	0	11	177,93,98,113,152,137,144,161,166,92,120,	0,639,824,1098,2935,3262,4182,4410,6302,7376,16399,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	90102648	90133445	chr15:90102648-90133445	3	+	90102648	90102648	8553170	4	115,73,118,49,	0,731,15331,30748,
#Partially deleted in new
chr15	90160603	90217786	chr15:90160603-90217786	0	+	90201578	90217786	789624	4	97,278,164,20,	0,40854,56835,57163,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	90166232	90166526	chr15:90166232-90166526	3	+	90166232	90166232	8553170	1	294,	0,
#Partially deleted in new
chr15	90184917	90219843	chr15:90184917-90219843	0	+	90217513	90217833	789624	4	164,164,162,51,	0,32521,32849,34875,
#Partially deleted in new
chr15	90184919	90221075	chr15:90184919-90221075	0	+	90217513	90221075	789624	5	162,164,63,99,94,	0,32519,32847,34873,36062,
#Partially deleted in new
chr15	90184962	90229670	chr15:90184962-90229670	3	+	90201578	90228643	789624	15	119,278,164,63,99,112,114,152,182,151,211,116,167,86,1767,	0,16495,32476,32804,34830,36019,36404,36651,38596,38875,40005,40319,40698,42594,42941,
#Partially deleted in new
chr15	90190343	90217554	chr15:90190343-90217554	0	+	90201578	90217554	789624	3	139,278,116,	0,11114,27095,
#Partially deleted in new
chr15	90191921	90193563	chr15:90191921-90193563	0	+	90191921	90191921	8553170	2	105,435,	0,1207,
#Partially deleted in new
chr15	90191927	90217810	chr15:90191927-90217810	0	+	90201578	90217810	789624	4	99,278,164,44,	0,9530,25511,25839,
#Partially deleted in new
chr15	90201318	90229676	chr15:90201318-90229676	1	+	90201578	90228643	789624	14	417,164,63,99,112,114,152,182,151,211,116,167,86,1773,	0,16120,16448,18474,19663,20048,20295,22240,22519,23649,23963,24342,26238,26585,
#Partially deleted in new
chr15	90201420	90228747	chr15:90201420-90228747	0	+	90201578	90217445	789624	15	315,28,164,63,99,112,114,152,182,151,211,116,167,86,844,	0,13516,16018,16346,18372,19561,19946,20193,22138,22417,23547,23861,24240,26136,26483,
#Partially deleted in new
chr15	90201535	90221392	chr15:90201535-90221392	0	+	90201535	90201535	8553170	5	200,164,63,99,26,	0,15903,16231,18257,19831,
#Deleted in new
chr15	90206571	90206967	chr15:90206571-90206967	7	+	90206571	90206571	16724991	1	396,	0,
#Deleted in new
chr15	90217055	90217785	chr15:90217055-90217785	0	+	90217055	90217055	8553170	2	547,19,	0,711,
#Partially deleted in new
chr15	90217616	90220218	chr15:90217616-90220218	0	+	90217616	90217616	8553170	2	213,426,	0,2176,
#Partially deleted in new
chr15	90219207	90229679	chr15:90219207-90229679	0	+	90219207	90219207	8553170	11	684,112,114,152,182,151,211,116,167,86,1776,	0,1774,2159,2406,4351,4630,5760,6074,6453,8349,8696,
#Partially deleted in new
chr15	90221617	90223792	chr15:90221617-90223792	0	+	90221617	90221617	8553170	2	148,234,	0,1941,
#Partially deleted in new
chr15	90221749	90229660	chr15:90221749-90229660	0	+	90221749	90229347	789624	9	16,182,151,211,116,167,86,361,407,	0,1809,2088,3218,3532,3911,5807,6154,7504,
#Partially deleted in new
chr15	90223876	90225674	chr15:90223876-90225674	0	+	90223876	90223876	8553170	3	112,430,14,	0,1091,1784,
#Deleted in new
chr15	90225001	90225608	chr15:90225001-90225608	0	+	90225001	90225001	8553170	2	177,327,	0,280,
#Partially deleted in new
chr15	90225071	90228155	chr15:90225071-90228155	0	+	90225071	90228155	789624	5	107,146,167,86,252,	0,210,589,2485,2832,
#Partially deleted in new
chr15	90225323	90228407	chr15:90225323-90228407	0	+	90225323	90227919	789624	4	74,167,105,504,	0,337,2214,2580,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	90227238	90228062	chr15:90227238-90228062	0	+	90227238	90227238	8553170	2	404,159,	0,665,
#Partially deleted in new
chr15	90229974	90234047	chr15:90229974-90234047	3	-	90230483	90233885	0	7	531,89,119,151,109,35,213,	0,959,1120,1382,2244,3694,3860,
#Partially deleted in new
chr15	90230245	90234047	chr15:90230245-90234047	1	-	90230483	90233885	0	7	260,89,119,151,229,35,213,	0,688,849,1111,1973,3423,3589,
#Partially deleted in new
chr15	90230249	90233960	chr15:90230249-90233960	1	-	90230483	90231115	8553170	8	256,89,119,151,105,109,35,42,	0,684,845,1107,1434,1969,3419,3669,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	90233807	90245811	chr15:90233807-90245811	3	+	90240908	90242066	789624	4	279,75,57,4912,	0,714,4684,7092,
#Partially deleted in new
chr15	90234225	90241550	chr15:90234225-90241550	0	+	90240908	90241550	789624	4	67,75,57,651,	0,296,4266,6674,
#Partially deleted in new
chr15	90234226	90263547	chr15:90234226-90263547	0	+	90234226	90234226	8553170	8	66,75,57,100,41,119,186,582,	0,295,4265,9891,17327,19022,27779,28739,
#Deleted in new
chr15	90240887	90242080	chr15:90240887-90242080	1	+	90240908	90242066	789624	1	1193,	0,
#Partially deleted in new
chr15	90249529	90259088	chr15:90249529-90259088	0	+	90249529	90249529	789624	10	279,268,41,119,131,157,144,86,232,346,	0,1090,2024,3719,6225,6611,7608,8107,8508,9213,
#Partially deleted in new
chr15	90249529	90264967	chr15:90249529-90264967	3	+	90250630	90264967	789624	15	279,268,41,119,131,157,144,86,232,185,186,178,180,304,248,	0,1090,2024,3719,6225,6611,7608,8107,8508,9213,12476,12962,13436,14225,15190,
#Partially deleted in new
chr15	90249529	90265482	chr15:90249529-90265482	0	+	90250630	90263754	789624	15	279,268,41,119,131,157,144,86,232,185,186,178,180,319,763,	0,1090,2024,3719,6225,6611,7608,8107,8508,9213,12476,12962,13436,14210,15190,
#Partially deleted in new
chr15	90249555	90272208	chr15:90249555-90272208	3	+	90250630	90258189	789624	13	253,268,41,119,144,86,87,185,186,1093,244,111,1021,	0,1064,1998,3693,7582,8081,8627,9187,12450,13410,15164,16732,21632,
#Partially deleted in new
chr15	90249781	90259012	chr15:90249781-90259012	0	+	90250630	90257658	789624	6	27,268,41,112,86,975,	0,838,1772,3467,7855,8256,
#Partially deleted in new
chr15	90250630	90264967	chr15:90250630-90264967	1	+	90250630	90264967	789624	14	257,41,119,131,157,144,86,232,185,186,178,180,112,248,	0,923,2618,5124,5510,6507,7006,7407,8112,11375,11861,12335,13316,14089,
#Partially deleted in new
chr15	90264859	90265477	chr15:90264859-90265477	0	+	90264859	90264859	8553170	2	104,216,	0,402,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	90265658	90273231	chr15:90265658-90273231	0	+	90265658	90265658	789624	2	740,2044,	0,5529,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	90265704	90278141	chr15:90265704-90278141	3	+	90265712	90271788	789624	3	172,111,6954,	0,583,5483,
#Partially deleted in new
chr15	90266316	90314499	chr15:90266316-90314499	3	+	90266316	90295224	789624	4	82,130,104,202,	0,28344,28806,47981,
#Partially deleted in new
chr15	90266342	90275778	chr15:90266342-90275778	0	+	90266342	90275462	789624	2	56,332,	0,9104,
#Deleted in new
chr15	90275128	90275716	chr15:90275128-90275716	7	+	90275128	90275128	16724991	1	588,	0,
#Partially deleted in new
chr15	90281847	90282031	chr15:90281847-90282031	7	-	90281847	90281847	16724991	1	184,	0,
#Partially deleted in new
chr15	90281857	90282270	chr15:90281857-90282270	3	+	90281857	90281857	8553170	1	413,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	90284375	90285580	chr15:90284375-90285580	7	-	90284375	90284375	16724991	2	271,623,	0,582,
#Partially deleted in new
chr15	90291961	90295683	chr15:90291961-90295683	7	+	90291961	90291961	16724991	6	185,117,69,96,183,129,	0,1867,2381,3172,3327,3593,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	90293938	90294207	chr15:90293938-90294207	3	+	90293938	90293938	8553170	1	269,	0,
#Partially deleted in new
chr15	90347586	90349437	chr15:90347586-90349437	3	+	90347586	90347586	789624	1	1851,	0,
#Partially deleted in new
chr15	90348843	90349197	chr15:90348843-90349197	7	-	90348843	90348843	16724991	1	354,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	90352244	90362847	chr15:90352244-90362847	3	+	90354660	90361283	789624	4	167,123,107,2805,	0,2397,6606,7798,
#Partially deleted in new
chr15	90352302	90360178	chr15:90352302-90360178	0	+	90354660	90355381	789624	5	109,123,66,107,136,	0,2339,3048,6548,7740,
#Partially deleted in new
chr15	90352315	90360438	chr15:90352315-90360438	0	+	90352315	90352315	8553170	3	96,107,396,	0,6535,7727,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	90352339	90369146	chr15:90352339-90369146	1	+	90354660	90362597	789624	5	72,123,107,97,5214,	0,2302,6511,10205,11593,
#Partially deleted in new
chr15	90354612	90360067	chr15:90354612-90360067	0	+	90354660	90360067	789624	3	152,107,25,	0,4238,5430,
#Partially deleted in new
chr15	90385813	90386063	chr15:90385813-90386063	7	+	90385813	90385813	16724991	1	250,	0,
#Partially deleted in new
chr15	90388217	90502243	chr15:90388217-90502243	3	+	90388341	90500108	0	38	179,100,157,78,77,68,114,179,85,164,85,164,161,125,164,91,168,143,171,84,72,70,209,156,164,225,141,85,233,133,103,136,88,213,167,123,109,2249,	0,2556,37892,41371,45501,51114,52284,53288,55176,60355,61341,64557,64914,66210,67934,77783,78051,79232,84622,85497,85678,85846,86267,88445,88849,89447,93742,93979,95143,96002,97812,98736,99277,103115,104327,106495,109014,111777,
#Partially deleted in new
chr15	90388246	90500854	chr15:90388246-90500854	0	+	90388341	90482722	789624	39	150,100,157,78,77,68,114,179,85,164,85,164,161,125,164,91,168,143,171,84,72,70,209,156,164,225,141,85,48,233,133,103,136,88,213,167,123,109,860,	0,2527,37863,41342,45472,51085,52255,53259,55147,60326,61312,64528,64885,66181,67905,77754,78022,79203,84593,85468,85649,85817,86238,88416,88820,89418,93713,93950,94455,95114,95973,97783,98707,99248,103086,104298,106466,108985,111748,
#Partially deleted in new
chr15	90388260	90500371	chr15:90388260-90500371	1	+	90388341	90500108	789624	25	136,51,45,168,143,171,84,72,70,209,156,164,225,141,85,233,133,103,136,88,213,167,123,109,377,	0,2513,77786,78008,79189,84579,85454,85635,85803,86224,88402,88806,89404,93699,93936,95100,95959,97769,98693,99234,103072,104284,106452,108971,111734,
#Partially deleted in new
chr15	90388276	90440528	chr15:90388276-90440528	0	+	90433760	90440528	789624	7	120,157,78,32,77,68,27,	0,37833,41312,42944,45442,51055,52225,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	90388354	90391932	chr15:90388354-90391932	0	+	90388354	90390877	789624	2	42,1159,	0,2419,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	90393489	90397881	chr15:90393489-90397881	3	-	90393489	90393489	8553170	2	384,74,	0,4318,
#Partially deleted in new
chr15	90426151	90429849	chr15:90426151-90429849	0	+	90426151	90426151	8553170	2	115,261,	0,3437,
#Partially deleted in new
chr15	90467481	90473078	chr15:90467481-90473078	0	+	90467481	90473052	789624	2	111,239,	0,5358,
#Deleted in new
chr15	90473547	90474239	chr15:90473547-90474239	0	+	90473547	90473547	8553170	2	420,176,	0,516,
#Partially deleted in new
chr15	90474321	90477103	chr15:90474321-90477103	0	+	90474321	90474321	8553170	3	372,156,37,	0,2341,2745,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	90474483	90475754	chr15:90474483-90475754	0	+	90474483	90474483	8553170	2	374,66,	0,1205,
#Partially deleted in new
chr15	90483204	90486051	chr15:90483204-90486051	0	+	90483204	90483204	8553170	3	389,133,22,	0,1015,2825,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	90484244	90486558	chr15:90484244-90486558	0	+	90484244	90484244	8553170	2	108,529,	0,1785,
#Partially deleted in new
chr15	90486094	90491671	chr15:90486094-90491671	0	+	90486094	90486094	8553170	4	38,136,88,339,	0,859,1400,5238,
#Partially deleted in new
chr15	90486742	90492616	chr15:90486742-90492616	0	+	90486742	90486742	8553170	4	347,88,213,72,	0,752,4590,5802,
#Partially deleted in new
chr15	90486882	90491620	chr15:90486882-90491620	0	+	90486882	90486882	8553170	3	207,88,288,	0,612,4450,
#Partially deleted in new
chr15	90487468	90494768	chr15:90487468-90494768	0	+	90487468	90487468	8553170	4	114,213,167,56,	0,3864,5076,7244,
#Partially deleted in new
chr15	90494026	90501389	chr15:90494026-90501389	0	+	90494026	90494026	8553170	3	809,109,1395,	0,3205,5968,
#Partially deleted in new
chr15	90496713	90502238	chr15:90496713-90502238	0	+	90496713	90496713	8553170	2	627,2244,	0,3281,
#Partially deleted in new
chr15	90529924	90645345	chr15:90529924-90645345	1	+	90530071	90642140	789624	15	279,99,120,62,63,101,36,86,50,218,299,201,81,103,3411,	0,10114,63711,72399,74460,77453,84528,87958,89816,95851,99309,108521,108810,111172,112010,
#Partially deleted in new
chr15	90529967	90599535	chr15:90529967-90599535	1	+	90530071	90598494	789624	3	236,99,1086,	0,10071,68482,
#Partially deleted in new
chr15	90530062	90600646	chr15:90530062-90600646	0	+	90530062	90530062	8553170	3	141,99,339,	0,9976,70245,
#Partially deleted in new
chr15	90530067	90642813	chr15:90530067-90642813	3	+	90530071	90642140	789624	15	136,99,120,62,63,101,36,86,50,218,299,201,81,103,882,	0,9971,63568,72256,74317,77310,84385,87815,89673,95708,99166,108378,108667,111029,111864,
#Partially deleted in new
chr15	90530531	90607410	chr15:90530531-90607410	0	+	90530531	90530531	8553170	6	216,99,120,62,63,33,	0,9507,63104,71792,73853,76846,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	90539616	90595577	chr15:90539616-90595577	0	+	90539616	90539616	8553170	2	521,1942,	0,54019,
#Partially deleted in new
chr15	90593711	90618206	chr15:90593711-90618206	0	+	90593711	90593711	8553170	6	44,62,63,101,36,324,	0,8612,10673,13666,20741,24171,
#Partially deleted in new
chr15	90593712	90625940	chr15:90593712-90625940	0	+	90593712	90625940	789624	7	43,62,63,101,86,50,165,	0,8611,10672,13665,24170,26028,32063,
#Deleted in new
chr15	90595839	90596447	chr15:90595839-90596447	3	-	90595839	90595839	8553170	2	361,113,	0,495,
#Deleted in new
chr15	90597842	90598911	chr15:90597842-90598911	0	+	90597842	90597842	8553170	2	86,462,	0,607,
#Partially deleted in new
chr15	90597873	90604404	chr15:90597873-90604404	0	+	90597873	90597873	8553170	4	338,134,51,20,	0,2434,4461,6511,
#Partially deleted in new
chr15	90598345	90625786	chr15:90598345-90625786	0	+	90598345	90598345	8553170	8	74,134,51,63,101,36,50,11,	0,1962,3989,6039,9032,16107,21395,27430,
#Partially deleted in new
chr15	90604224	90614558	chr15:90604224-90614558	3	-	90604224	90604224	8553170	3	239,96,472,	0,2552,9862,
#Partially deleted in new
chr15	90613656	90619790	chr15:90613656-90619790	0	+	90613656	90613656	8553170	4	393,36,86,50,	0,796,4226,6084,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	90620006	90717141	chr15:90620006-90717141	3	-	90620006	90620006	789624	4	147,216,133,161,	0,21035,93160,96974,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	90624906	90629413	chr15:90624906-90629413	0	+	90624906	90624906	8553170	3	156,218,180,	0,869,4327,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	90630534	90631755	chr15:90630534-90631755	3	-	90630534	90630534	8553170	2	208,680,	0,541,
#Deleted in new
chr15	90634724	90635033	chr15:90634724-90635033	7	+	90634724	90634724	16724991	1	309,	0,
#Deleted in new
chr15	90637851	90638517	chr15:90637851-90638517	0	+	90637851	90637851	8553170	2	487,72,	0,594,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	90650630	90651103	chr15:90650630-90651103	3	+	90650630	90650630	8553170	1	473,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	90660233	90664967	chr15:90660233-90664967	3	+	90660233	90660233	789624	3	591,91,613,	0,1159,4121,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	90660738	90664686	chr15:90660738-90664686	0	+	90660738	90660738	8553170	2	86,332,	0,3616,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	90712992	90717049	chr15:90712992-90717049	1	-	90712992	90712992	8553170	3	307,122,73,	0,1928,3984,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr15	90717326	90816165	chr15:90717326-90816165	3	+	90747392	90815279	0	22	114,102,701,160,128,133,662,192,119,114,99,149,107,161,196,191,148,200,193,123,202,1064,	0,30062,32040,34460,37484,42820,43267,45639,47969,49583,51806,52111,65495,67594,73322,76840,80863,86194,86840,91810,93878,97775,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr15	90717362	90815342	chr15:90717362-90815342	0	+	90747392	90811762	8553170	23	78,102,701,160,128,133,662,192,119,114,99,149,107,161,196,191,148,200,193,123,202,123,241,	0,30026,32004,34424,37448,42784,43231,45603,47933,49547,51770,52075,65459,67558,73286,76804,80827,86158,86804,91774,93842,94315,97739,
#Partially deleted in new
chr15	90717393	90815333	chr15:90717393-90815333	1	+	90747392	90815279	789624	20	47,102,701,160,128,133,662,192,119,114,99,149,107,161,196,191,148,123,202,232,	0,29995,31973,34393,37417,42753,43200,45572,47902,49516,51739,52044,65428,67527,73255,76773,80796,91743,93811,97708,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr15	90717403	90815328	chr15:90717403-90815328	0	+	90747392	90760135	789624	22	37,102,701,160,128,299,662,192,119,114,99,149,107,161,196,191,148,200,193,123,202,227,	0,29985,31963,34383,37407,42577,43190,45562,47892,49506,51729,52034,65418,67517,73245,76763,80786,86117,86763,91733,93801,97698,
#Partially deleted in new
chr15	90747389	90749960	chr15:90747389-90749960	0	+	90747389	90747389	8553170	2	272,594,	0,1977,
#Partially deleted in new
chr15	90750007	90760822	chr15:90750007-90760822	0	+	90750007	90750007	8553170	4	60,160,128,229,	0,1779,4803,10586,
#Deleted in new
chr15	90755242	90755312	chr15:90755242-90755312	3	-	90755242	90755242	8553170	1	70,	0,
#Partially deleted in new
chr15	90762363	90769181	chr15:90762363-90769181	0	+	90762363	90762363	8553170	5	59,192,119,114,49,	0,602,2932,4546,6769,
#Partially deleted in new
chr15	90762395	90811327	chr15:90762395-90811327	0	+	90762395	90762395	8553170	14	27,192,114,99,149,107,161,196,191,148,200,193,123,123,	0,570,4514,6737,7042,20426,22525,28253,31771,35794,41125,41771,46741,48809,
#Partially deleted in new
chr15	90790288	90794357	chr15:90790288-90794357	0	+	90790288	90790288	8553170	2	556,191,	0,3878,
#Partially deleted in new
chr15	90793800	90815361	chr15:90793800-90815361	0	+	90793800	90793800	8553170	7	557,148,200,193,123,202,260,	0,4389,9720,10366,15336,17404,21301,
#Partially deleted in new
chr15	90808770	90815629	chr15:90808770-90815629	0	+	90808770	90808770	8553170	4	171,123,202,528,	0,366,2434,6331,
#Partially deleted in new
chr15	90839723	90841378	chr15:90839723-90841378	3	+	90839723	90839723	8553170	2	177,225,	0,1430,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	90855934	90856207	chr15:90855934-90856207	3	-	90855934	90855934	8553170	1	273,	0,
#Partially deleted in new
chr15	90868591	90883458	chr15:90868591-90883458	3	+	90875740	90881878	0	16	120,336,99,96,129,77,89,173,213,101,104,118,180,125,111,2173,	0,6990,7663,7870,8304,8543,8935,9540,10172,10852,11079,11275,11502,12099,12338,12694,
#Partially deleted in new
chr15	90871538	90883458	chr15:90871538-90883458	1	+	90875740	90881878	0	16	67,336,99,96,129,77,89,173,213,101,104,118,180,125,111,2173,	0,4043,4716,4923,5357,5596,5988,6593,7225,7905,8132,8328,8555,9152,9391,9747,
#Partially deleted in new
chr15	90872877	90876284	chr15:90872877-90876284	0	+	90875740	90876284	789624	3	221,336,30,	0,2704,3377,
#Partially deleted in new
chr15	90872877	90883458	chr15:90872877-90883458	1	+	90875740	90881878	0	16	221,336,99,96,129,77,89,173,213,101,104,118,180,125,111,2173,	0,2704,3377,3584,4018,4257,4649,5254,5886,6566,6793,6989,7216,7813,8052,8408,
#Deleted in new
chr15	90875687	90877166	chr15:90875687-90877166	0	+	90875740	90877166	789624	5	230,99,90,129,32,	0,567,780,1208,1447,
#Partially deleted in new
chr15	90878193	90880756	chr15:90878193-90880756	0	+	90878193	90879988	789624	6	111,213,101,104,249,66,	0,570,1250,1477,1673,2497,
#Deleted in new
chr15	90879583	90880096	chr15:90879583-90880096	0	+	90879583	90879583	8553170	2	191,230,	0,283,
#Deleted in new
chr15	90879719	90880145	chr15:90879719-90880145	1	+	90879719	90880131	789624	4	55,26,91,52,	0,147,174,374,
#Deleted in new
chr15	90883694	90885172	chr15:90883694-90885172	0	+	90885045	90885172	789624	2	349,136,	0,1342,
#Partially deleted in new
chr15	90884411	90895776	chr15:90884411-90895776	3	+	90885045	90895558	0	19	133,222,174,97,184,138,120,123,187,84,210,123,54,119,95,124,158,123,361,	0,625,1000,2549,2775,4894,5105,5428,5680,5989,6570,7142,7646,8295,8688,8879,9242,9524,11004,
#Partially deleted in new
chr15	90884446	90895693	chr15:90884446-90895693	1	+	90885045	90895558	0	17	98,222,97,184,138,120,123,187,84,123,54,119,95,124,158,123,278,	0,590,2514,2740,4859,5070,5393,5645,5954,7107,7611,8260,8653,8844,9207,9489,10969,
#Partially deleted in new
chr15	90884446	90889378	chr15:90884446-90889378	0	+	90885045	90885411	789624	5	193,549,97,184,73,	0,590,2514,2740,4859,
#Partially deleted in new
chr15	90884468	90895560	chr15:90884468-90895560	1	+	90885045	90895558	789624	17	76,222,97,184,138,120,123,187,84,123,54,119,37,143,158,123,145,	0,568,2492,2718,4837,5048,5371,5623,5932,7085,7589,8238,8689,8803,9185,9467,10947,
#Deleted in new
chr15	90884468	90885529	chr15:90884468-90885529	0	+	90884468	90884468	8553170	2	76,493,	0,568,
#Partially deleted in new
chr15	90884468	90887209	chr15:90884468-90887209	0	+	90885045	90887209	789624	5	76,217,174,97,23,	0,573,943,2492,2718,
#Partially deleted in new
chr15	90884503	90887015	chr15:90884503-90887015	0	+	90885045	90887015	789624	4	136,222,174,55,	0,533,908,2457,
#Partially deleted in new
chr15	90884522	90895598	chr15:90884522-90895598	0	+	90885045	90891617	789624	18	22,222,174,97,184,138,120,123,187,84,200,177,54,119,95,124,158,183,	0,514,889,2438,2664,4783,4994,5317,5569,5878,6459,6977,7535,8184,8577,8768,9131,10893,
#Deleted in new
chr15	90884712	90885542	chr15:90884712-90885542	0	+	90885045	90885542	789624	3	191,222,131,	0,324,699,
#Partially deleted in new
chr15	90885045	90895565	chr15:90885045-90895565	1	+	90885045	90895558	0	17	213,97,184,138,120,123,187,84,210,123,54,119,95,124,158,123,150,	0,1915,2141,4260,4471,4794,5046,5355,5936,6508,7012,7661,8054,8245,8608,8890,10370,
#Partially deleted in new
chr15	90885045	90895565	chr15:90885045-90895565	1	+	90885045	90895558	0	17	213,174,97,184,138,120,123,187,84,123,54,119,95,124,158,123,150,	0,366,1915,2141,4260,4471,4794,5046,5355,6508,7012,7661,8054,8245,8608,8890,10370,
#Partially deleted in new
chr15	90885339	90889325	chr15:90885339-90889325	0	+	90885339	90885339	8553170	4	246,97,184,20,	0,1621,1847,3966,
#Deleted in new
chr15	90889205	90889939	chr15:90889205-90889939	0	+	90889205	90889205	8553170	2	431,100,	0,634,
#Deleted in new
chr15	90889549	90891022	chr15:90889549-90891022	0	+	90889549	90889549	8553170	5	87,123,187,119,41,	0,290,542,816,1432,
#Deleted in new
chr15	90889839	90892409	chr15:90889839-90892409	0	+	90889839	90889839	8553170	5	123,187,84,123,352,	0,252,561,1714,2218,
#Deleted in new
chr15	90889848	90890525	chr15:90889848-90890525	0	+	90889848	90889848	8553170	3	114,187,160,	0,243,517,
#Partially deleted in new
chr15	90902217	90905336	chr15:90902217-90905336	0	+	90904207	90905336	789624	4	309,504,150,86,	0,1013,1972,3033,
#Partially deleted in new
chr15	90902274	90905270	chr15:90902274-90905270	0	+	90904207	90905270	789624	4	252,202,150,20,	0,956,1915,2976,
#Partially deleted in new
chr15	90902376	90905479	chr15:90902376-90905479	0	+	90904207	90905479	789624	3	150,150,229,	0,1813,2874,
#Deleted in new
chr15	90902427	90903741	chr15:90902427-90903741	0	+	90902427	90902427	8553170	3	99,202,60,	0,803,1254,
#Partially deleted in new
chr15	90902694	90921191	chr15:90902694-90921191	0	+	90904207	90913744	789624	23	281,150,258,145,172,128,174,187,178,203,183,115,68,166,237,123,115,102,142,134,195,111,1557,	0,1495,2556,2884,3150,3675,4045,4614,6632,7395,7806,8152,8476,8690,9348,9847,10182,10578,10919,13428,15499,15950,16940,
#Partially deleted in new
chr15	90902925	90921191	chr15:90902925-90921191	0	+	90904207	90912561	789624	23	50,150,258,145,172,128,174,187,178,203,183,115,68,166,237,148,115,102,142,134,195,111,1557,	0,1264,2325,2653,2919,3444,3814,4383,6401,7164,7575,7921,8245,8459,9117,9591,9951,10347,10688,13197,15268,15719,16709,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr15	90902991	90922579	chr15:90902991-90922579	3	+	90904207	90919787	789624	23	441,150,258,145,172,128,174,187,178,203,183,115,68,166,237,123,115,134,142,134,195,111,2945,	0,1198,2259,2587,2853,3378,3748,4317,6335,7098,7509,7855,8179,8393,9051,9550,9885,10281,10622,13131,15202,15653,16643,
#Partially deleted in new
chr15	90903743	90905346	chr15:90903743-90905346	0	+	90904207	90905346	789624	3	291,150,96,	0,446,1507,
#Partially deleted in new
chr15	90903845	90911402	chr15:90903845-90911402	0	+	90903845	90903845	8553170	12	494,258,145,172,128,174,187,178,203,183,115,232,	0,1405,1733,1999,2524,2894,3463,5481,6244,6655,7001,7325,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr15	90904189	90922584	chr15:90904189-90922584	1	+	90904207	90919787	789624	22	150,258,145,172,128,174,187,178,203,183,115,68,166,237,123,115,134,142,134,195,111,2950,	0,1061,1389,1655,2180,2550,3119,5137,5900,6311,6657,6981,7195,7853,8352,8687,9083,9424,11933,14004,14455,15445,
#Deleted in new
chr15	90905378	90906858	chr15:90905378-90906858	0	+	90905378	90906858	789624	5	130,111,95,128,119,	0,200,543,991,1361,
#Deleted in new
chr15	90905979	90907381	chr15:90905979-90907381	0	+	90905979	90905979	8553170	4	37,128,174,193,	0,390,760,1209,
#Deleted in new
chr15	90906452	90907519	chr15:90906452-90907519	0	+	90906452	90906452	8553170	3	45,174,211,	0,287,856,
#Partially deleted in new
chr15	90906849	90920076	chr15:90906849-90920076	0	+	90906849	90919787	789624	17	64,187,178,77,183,115,68,166,237,123,115,134,142,134,195,111,442,	0,459,2477,3366,3651,3997,4321,4535,5193,5692,6027,6423,6764,9273,11344,11795,12785,
#Partially deleted in new
chr15	90907387	90912212	chr15:90907387-90912212	0	+	90907387	90912212	789624	7	108,178,183,115,68,166,170,	0,1939,3113,3459,3783,3997,4655,
#Deleted in new
chr15	90910154	90912144	chr15:90910154-90912144	0	+	90910154	90912144	789624	6	138,183,115,68,184,102,	0,346,692,1016,1212,1888,
#Deleted in new
chr15	90910609	90912110	chr15:90910609-90912110	0	+	90910609	90910609	8553170	5	74,115,68,135,68,	0,237,561,806,1433,
#Deleted in new
chr15	90910619	90911425	chr15:90910619-90911425	0	+	90910619	90910619	8553170	2	64,579,	0,227,
#Deleted in new
chr15	90911395	90912950	chr15:90911395-90912950	0	+	90911395	90911395	8553170	3	155,622,74,	0,647,1481,
#Deleted in new
chr15	90911851	90913638	chr15:90911851-90913638	0	+	90911851	90911851	8553170	4	428,148,115,366,	0,665,1025,1421,
#Partially deleted in new
chr15	90912182	90920394	chr15:90912182-90920394	0	+	90912182	90919787	789624	9	97,115,134,142,134,195,111,231,284,	0,694,1090,1431,3940,6011,6462,7452,7928,
#Partially deleted in new
chr15	90912879	90918297	chr15:90912879-90918297	0	+	90912879	90918297	789624	4	112,142,134,104,	0,734,3243,5314,
#Partially deleted in new
chr15	90912887	90919695	chr15:90912887-90919695	0	+	90912887	90919695	789624	8	104,134,142,134,75,195,111,61,	0,385,726,3235,3698,5306,5757,6747,
#Partially deleted in new
chr15	90915417	90919691	chr15:90915417-90919691	0	+	90915417	90915417	8553170	5	79,134,195,111,57,	0,705,2776,3227,4217,
#Partially deleted in new
chr15	90915994	90919689	chr15:90915994-90919689	0	+	90915994	90915994	8553170	4	262,195,111,55,	0,2199,2650,3640,
#Partially deleted in new
chr15	90915994	90919865	chr15:90915994-90919865	0	+	90915994	90915994	8553170	4	73,154,111,231,	0,2240,2650,3640,
#Deleted in new
chr15	90916100	90918755	chr15:90916100-90918755	0	+	90916100	90916100	8553170	2	156,562,	0,2093,
#Partially deleted in new
chr15	90916526	90919966	chr15:90916526-90919966	0	+	90916526	90916526	8553170	4	134,154,111,332,	0,1708,2118,3108,
#Partially deleted in new
chr15	90917651	90919698	chr15:90917651-90919698	0	+	90917651	90917651	8553170	4	192,195,111,64,	0,542,993,1983,
#Partially deleted in new
chr15	90918733	90921194	chr15:90918733-90921194	0	+	90918733	90919787	789624	3	22,231,196,	0,901,2265,
#Deleted in new
chr15	90920217	90921186	chr15:90920217-90921186	3	-	90920217	90920217	8553170	2	174,621,	0,348,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	90929963	90932569	chr15:90929963-90932569	1	-	90931274	90932540	0	4	1442,241,56,141,	0,1740,2091,2465,
#Partially deleted in new
chr15	90930179	90954093	chr15:90930179-90954093	1	+	90935324	90953716	0	23	76,167,211,387,162,37,176,93,168,169,171,172,301,95,142,141,128,67,114,116,118,156,635,	0,3797,4159,4764,5364,5766,6105,9551,10126,12257,12732,14712,16434,17616,17962,18474,19136,19474,19974,20320,22749,22975,23279,
#Partially deleted in new
chr15	90930179	90935121	chr15:90930179-90935121	0	+	90930179	90930179	8553170	4	76,167,115,178,	0,3797,4255,4764,
#Partially deleted in new
chr15	90930179	90934960	chr15:90930179-90934960	0	+	90930179	90930179	8553170	5	76,100,167,211,17,	0,773,3797,4159,4764,
#Partially deleted in new
chr15	90930217	90931579	chr15:90930217-90931579	0	+	90930217	90930217	8553170	2	38,627,	0,735,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	90930311	90935196	chr15:90930311-90935196	0	-	90930311	90930311	8553170	3	1094,241,3142,	0,1392,1743,
#Deleted in new
chr15	90930917	90935130	chr15:90930917-90935130	3	-	90931274	90932540	0	5	488,241,56,378,146,	0,786,1137,1511,4067,
#Deleted in new
chr15	90930924	90932546	chr15:90930924-90932546	1	-	90931542	90932540	0	4	632,241,56,118,	0,779,1130,1504,
#Deleted in new
chr15	90930924	90932552	chr15:90930924-90932552	0	-	90930924	90930924	8553170	3	481,241,498,	0,779,1130,
#Deleted in new
chr15	90931098	90932550	chr15:90931098-90932550	1	-	90931680	90932540	789624	3	846,56,122,	0,956,1330,
#Deleted in new
chr15	90931150	90932524	chr15:90931150-90932524	0	-	90931150	90931150	8553170	2	255,821,	0,553,
#Deleted in new
chr15	90931336	90932476	chr15:90931336-90932476	0	-	90931336	90932476	789624	4	69,241,56,91,	0,367,718,1049,
#Deleted in new
chr15	90932054	90935130	chr15:90932054-90935130	0	-	90932054	90932054	8553170	2	56,146,	0,2930,
#Deleted in new
chr15	90932601	90935054	chr15:90932601-90935054	0	-	90932601	90932601	8553170	2	154,70,	0,2383,
#Partially deleted in new
chr15	90934040	90953716	chr15:90934040-90953716	1	+	90934040	90953716	789624	22	103,211,157,162,37,176,93,168,169,171,172,301,95,142,141,128,67,114,116,118,156,258,	0,298,903,1503,1905,2244,5690,6265,8396,8871,10851,12573,13755,14101,14613,15275,15613,16113,16459,18888,19114,19418,
#Partially deleted in new
chr15	90935284	90954093	chr15:90935284-90954093	3	+	90935324	90953716	0	20	91,162,37,176,93,168,169,171,172,301,95,142,141,128,67,114,116,118,156,635,	0,259,661,1000,4446,5021,7152,7627,9607,11329,12511,12857,13369,14031,14369,14869,15215,17644,17870,18174,
#Deleted in new
chr15	90935284	90936455	chr15:90935284-90936455	0	+	90935284	90935284	8553170	4	46,162,37,319,	0,259,661,852,
#Partially deleted in new
chr15	90935284	90939777	chr15:90935284-90939777	0	+	90935284	90935284	8553170	4	46,162,515,47,	0,259,661,4446,
#Partially deleted in new
chr15	90935284	90943084	chr15:90935284-90943084	0	+	90935284	90935284	8553170	7	46,162,37,176,93,168,173,	0,259,661,1000,4446,5021,7627,
#Partially deleted in new
chr15	90935284	90943089	chr15:90935284-90943089	0	+	90935284	90935284	8553170	7	91,162,37,324,93,168,653,	0,259,661,852,4446,5021,7152,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	90935309	90940976	chr15:90935309-90940976	0	+	90935309	90935309	8553170	5	66,162,515,93,671,	0,234,636,4421,4996,
#Partially deleted in new
chr15	90935423	90939817	chr15:90935423-90939817	0	+	90935423	90935423	8553170	4	282,37,176,87,	0,522,861,4307,
#Partially deleted in new
chr15	90942442	90948555	chr15:90942442-90948555	0	+	90942442	90942442	8553170	4	640,150,95,414,	0,4322,5353,5699,
#Partially deleted in new
chr15	90945035	90947138	chr15:90945035-90947138	0	+	90945035	90945035	8553170	2	28,525,	0,1578,
#Partially deleted in new
chr15	90947236	90954093	chr15:90947236-90954093	0	+	90947236	90947236	8553170	9	654,653,128,67,114,116,118,156,635,	0,905,2079,2417,2917,3263,5692,5918,6222,
#Partially deleted in new
chr15	90949352	90954093	chr15:90949352-90954093	0	+	90949352	90949352	8553170	6	91,614,116,118,156,635,	0,301,1147,3576,3802,4106,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	90952238	90955225	chr15:90952238-90955225	3	-	90952238	90952238	8553170	2	967,891,	0,2096,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	90954869	90963125	chr15:90954869-90963125	3	+	90956734	90961769	0	8	79,289,391,122,99,171,30,1508,	0,1742,2243,2734,5030,5458,6155,6748,
#Partially deleted in new
chr15	90954880	90962324	chr15:90954880-90962324	1	+	90956734	90961769	789624	8	68,289,391,122,99,165,30,707,	0,1731,2232,2723,5019,5453,6144,6737,
#Partially deleted in new
chr15	90954883	90962222	chr15:90954883-90962222	0	+	90954883	90954883	8553170	6	65,84,892,122,99,1895,	0,916,1728,2720,5016,5444,
#Partially deleted in new
chr15	90954888	90959978	chr15:90954888-90959978	0	+	90954888	90954888	8553170	2	60,79,	0,5011,
#Partially deleted in new
chr15	90955381	90962342	chr15:90955381-90962342	0	+	90955381	90955381	8553170	7	71,892,122,99,171,30,725,	0,1230,2222,4518,4946,5643,6236,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	90955392	90957106	chr15:90955392-90957106	0	+	90955392	90955392	8553170	2	491,495,	0,1219,
#Partially deleted in new
chr15	90955795	90962221	chr15:90955795-90962221	1	+	90956734	90961769	0	9	88,200,391,122,99,171,30,157,298,	0,905,1317,1808,4104,4532,5229,5822,6128,
#Partially deleted in new
chr15	90956739	90961769	chr15:90956739-90961769	0	+	90956739	90957677	789624	6	161,122,99,171,30,152,	0,864,3160,3588,4285,4878,
#Deleted in new
chr15	90959751	90961973	chr15:90959751-90961973	0	+	90959751	90959751	8553170	2	747,949,	0,1273,
#Partially deleted in new
chr15	90966037	90994495	chr15:90966037-90994495	3	-	90967130	90994417	0	15	1165,42,177,111,111,147,96,137,148,150,171,234,123,133,89,	0,3041,3409,4366,8098,8547,10638,13120,14204,14846,15461,15710,17980,18655,28369,
#Partially deleted in new
chr15	90966049	90970427	chr15:90966049-90970427	0	-	90966636	90970427	789624	3	604,100,24,	0,3474,4354,
#Partially deleted in new
chr15	90966076	90995629	chr15:90966076-90995629	1	-	90967130	90994417	0	14	1126,177,111,111,147,96,137,148,150,171,234,123,133,1223,	0,3370,4327,8059,8508,10599,13081,14165,14807,15422,15671,17941,18616,28330,
#Boundary problem: need 35, got 0, diff 35, mapped 0.0
chr15	90966189	91022566	chr15:90966189-91022566	3	-	90984799	91022249	789624	35	2931,100,111,111,147,96,137,148,150,171,234,123,133,117,76,102,74,133,47,55,65,75,91,87,74,78,97,105,95,46,68,50,62,81,413,	0,3334,4214,7946,8395,10486,12968,14052,14694,15309,15558,17828,18503,33487,33710,34300,35199,35860,36895,38687,38865,39190,39504,39783,40182,40462,40760,41279,41680,43611,47614,48194,50773,51615,55964,
#Partially deleted in new
chr15	90966344	90973106	chr15:90966344-90973106	0	+	90966344	90966344	8553170	2	334,247,	0,6515,
#Partially deleted in new
chr15	90966371	90988624	chr15:90966371-90988624	3	+	90966371	90966371	789624	4	307,136,87,995,	0,15583,17320,21258,
#Partially deleted in new
chr15	90966464	90976728	chr15:90966464-90976728	0	-	90966578	90976728	789624	7	189,42,177,111,111,147,53,	0,2614,2982,3939,7671,8120,10211,
#Partially deleted in new
chr15	90966663	90970477	chr15:90966663-90970477	0	-	90969100	90970477	789624	4	539,42,100,74,	0,2415,2860,3740,
#Partially deleted in new
chr15	90966799	90994525	chr15:90966799-90994525	1	-	90967173	90994417	0	13	403,100,111,111,147,96,137,148,150,171,234,133,119,	0,2724,3604,7336,7785,9876,12358,13442,14084,14699,14948,17893,27607,
#Partially deleted in new
chr15	90969575	90980286	chr15:90969575-90980286	0	-	90969575	90980286	789624	6	48,111,147,96,137,45,	0,4560,5009,7100,9582,10666,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	90974010	90976768	chr15:90974010-90976768	0	-	90974010	90974010	8553170	3	236,147,93,	0,574,2665,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	90974573	90980523	chr15:90974573-90980523	0	-	90974573	90974573	8553170	4	158,96,137,282,	0,2102,4584,5668,
#Partially deleted in new
chr15	90974599	91022293	chr15:90974599-91022293	0	-	90984799	91022249	789624	30	132,96,137,148,786,234,123,133,117,76,102,74,133,47,55,65,75,91,87,74,78,97,105,95,46,68,50,62,81,140,	0,2076,4558,5642,6284,7148,9418,10093,25077,25300,25890,26789,27450,28485,30277,30455,30780,31094,31373,31772,32052,32350,32869,33270,35201,39204,39784,42363,43205,47554,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	90977207	90977305	chr15:90977207-90977305	3	-	90977207	90977207	8553170	1	98,	0,
#Partially deleted in new
chr15	90979207	90981231	chr15:90979207-90981231	0	-	90979207	90979207	8553170	3	87,148,348,	0,1034,1676,
#Partially deleted in new
chr15	90980936	90994536	chr15:90980936-90994536	0	-	90980936	90980936	8553170	5	97,234,123,133,130,	0,811,3081,3756,13470,
#Partially deleted in new
chr15	90980937	90994504	chr15:90980937-90994504	0	-	90980937	90980937	8553170	5	96,483,123,133,98,	0,561,3080,3755,13469,
#Partially deleted in new
chr15	90980942	90994537	chr15:90980942-90994537	0	-	90980942	90980942	8553170	4	727,234,123,131,	0,805,3075,13464,
#Partially deleted in new
chr15	90981509	90994510	chr15:90981509-90994510	0	-	90981509	90981509	8553170	2	472,104,	0,12897,
#Partially deleted in new
chr15	90981584	90994525	chr15:90981584-90994525	0	-	90981584	90994417	789624	4	85,234,133,119,	0,163,3108,12822,
#Partially deleted in new
chr15	90981885	90994602	chr15:90981885-90994602	0	-	90981885	90981885	8553170	4	96,235,133,196,	0,2020,2807,12521,
#Partially deleted in new
chr15	90981962	90994500	chr15:90981962-90994500	0	-	90981962	90994417	789624	4	64,123,133,94,	0,2055,2730,12444,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	90984056	90994509	chr15:90984056-90994509	0	-	90984056	90984056	8553170	4	84,133,263,103,	0,636,1706,10350,
#Partially deleted in new
chr15	90998415	91022603	chr15:90998415-91022603	3	-	90998974	91022249	789624	23	639,117,76,102,74,133,47,55,65,75,91,87,74,78,97,105,95,46,68,50,62,81,450,	0,1261,1484,2074,2973,3634,4669,6461,6639,6964,7278,7557,7956,8236,8534,9053,9454,11385,15388,15968,18547,19389,23738,
#Partially deleted in new
chr15	90998672	91001433	chr15:90998672-91001433	0	-	90998672	90998672	8553170	3	382,102,45,	0,1817,2716,
#Partially deleted in new
chr15	90998674	91022596	chr15:90998674-91022596	1	-	90998974	91022249	789624	22	380,117,76,102,74,133,47,55,65,75,91,87,74,78,97,105,95,46,68,50,62,443,	0,1002,1225,1815,2714,3375,4410,6202,6380,6705,7019,7298,7697,7977,8275,8794,9195,11126,15129,15709,18288,23479,
#Partially deleted in new
chr15	90998674	91022513	chr15:90998674-91022513	0	-	91013855	91022249	789624	22	380,117,76,102,74,133,47,55,65,75,91,87,74,78,97,105,95,46,68,50,81,360,	0,1002,1225,1815,2714,3375,4410,6202,6380,6705,7019,7298,7697,7977,8275,8794,9195,11126,15129,15709,19130,23479,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	90999330	91001005	chr15:90999330-91001005	0	-	90999330	90999330	8553170	3	463,76,516,	0,569,1159,
#Partially deleted in new
chr15	91006000	91022603	chr15:91006000-91022603	0	-	91006000	91006000	8553170	10	59,675,105,95,46,68,50,102,81,450,	0,371,1468,1869,3800,7803,8383,10962,11804,16153,
#Partially deleted in new
chr15	91007901	91018036	chr15:91007901-91018036	0	-	91007901	91007901	8553170	7	63,46,68,50,62,81,19,	0,1899,5902,6482,9061,9903,10116,
#Partially deleted in new
chr15	91013803	91022596	chr15:91013803-91022596	0	-	91013803	91013803	8553170	3	68,50,443,	0,580,8350,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	91022618	91030706	chr15:91022618-91030706	2	+	91022618	91022618	8553170	4	122,282,111,48,	0,694,7512,8040,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	91022620	91036611	chr15:91022620-91036611	1	+	91022620	91022620	8553170	5	120,123,111,111,1694,	0,692,7510,9796,12297,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	91022621	91023701	chr15:91022621-91023701	0	+	91022621	91022621	8553170	2	119,389,	0,691,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	91022621	91031140	chr15:91022621-91031140	1	+	91022621	91022621	789624	4	119,659,361,482,	0,691,7259,8037,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	91022765	91023200	chr15:91022765-91023200	3	+	91022765	91022765	8553170	1	435,	0,
#Deleted in new
chr15	91029887	91029996	chr15:91029887-91029996	7	+	91029887	91029887	16724991	1	109,	0,
#Deleted in new
chr15	91031245	91031691	chr15:91031245-91031691	7	-	91031245	91031245	16724991	2	194,169,	0,277,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	91031711	91032435	chr15:91031711-91032435	7	-	91031711	91031711	16724991	3	96,192,40,	0,237,684,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	91094846	91099838	chr15:91094846-91099838	3	-	91094846	91094846	8553170	2	1359,658,	0,4334,
#Partially deleted in new
chr15	91099949	91292636	chr15:91099949-91292636	1	+	91251820	91292552	789624	12	414,181,152,134,90,111,89,165,134,201,160,268,	0,151869,152419,158471,160370,166632,167605,168491,181778,184071,189571,192419,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr15	91100284	91301309	chr15:91100284-91301309	3	+	91226263	91292552	789624	13	79,842,181,152,134,90,111,89,165,134,201,160,8941,	0,125588,151534,152084,158136,160035,166297,167270,168156,181443,183736,189236,192084,
#Partially deleted in new
chr15	91101827	91251926	chr15:91101827-91251926	0	+	91101827	91101827	8553170	2	493,108,	0,149991,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	91225869	91301308	chr15:91225869-91301308	1	+	91226263	91292552	789624	12	845,181,152,134,90,111,89,165,134,201,160,8940,	0,25949,26499,32551,34450,40712,41685,42571,55858,58151,63651,66499,
#Partially deleted in new
chr15	91258476	91266948	chr15:91258476-91266948	0	+	91258476	91258476	8553170	3	78,90,367,	0,1843,8105,
#Deleted in new
chr15	91303755	91306321	chr15:91303755-91306321	3	+	91303755	91303755	8553170	3	51,157,794,	0,1162,1772,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	91408707	91605211	chr15:91408707-91605211	0	+	91408707	91408707	8553170	3	134,96,335,	0,64513,196169,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	91463336	91494850	chr15:91463336-91494850	3	+	91463336	91463336	789624	4	295,96,91,1658,	0,9884,26050,29856,
#Deleted in new
chr15	91532890	91535095	chr15:91532890-91535095	3	+	91532890	91532890	8553170	2	162,269,	0,1936,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	91643016	91649114	chr15:91643016-91649114	3	-	91643016	91643016	8553170	3	382,141,69,	0,1721,6029,
#Deleted in new
chr15	91676770	91677060	chr15:91676770-91677060	7	+	91676770	91676770	16724991	1	290,	0,
#Deleted in new
chr15	91742840	91743955	chr15:91742840-91743955	7	-	91742840	91742840	16724991	1	1115,	0,
#Partially deleted in new
chr15	91853694	92165903	chr15:91853694-92165903	3	+	91853908	92163135	789624	10	394,466,99,264,165,199,139,176,65,3148,	0,62298,241186,250584,266770,272366,274656,293289,297255,309061,
#Partially deleted in new
chr15	91853722	92151216	chr15:91853722-92151216	0	+	91853722	91853722	8553170	9	366,466,99,264,165,199,139,176,267,	0,62270,241158,250556,266742,272338,274628,293261,297227,
#Partially deleted in new
chr15	91853855	92172435	chr15:91853855-92172435	1	+	91853908	92171862	789624	11	233,466,99,264,165,199,139,176,65,243,656,	0,62137,241025,250423,266609,272205,274495,293128,297094,308900,317924,
#Partially deleted in new
chr15	91854024	91908759	chr15:91854024-91908759	0	+	91854024	91854024	8553170	3	64,105,258,	0,35076,54477,
#Partially deleted in new
chr15	91854120	91916378	chr15:91854120-91916378	0	+	91854295	91916378	789624	2	181,386,	0,61872,
#Partially deleted in new
chr15	91854335	92155269	chr15:91854335-92155269	0	+	91854335	91854335	789624	11	75,466,99,264,165,199,139,176,65,125,77,	0,61657,240545,249943,266129,271725,274015,292648,296614,299161,300857,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	91941317	92104537	chr15:91941317-92104537	0	+	91941317	91941317	8553170	3	259,99,259,	0,153563,162961,
#Partially deleted in new
chr15	92097929	92163546	chr15:92097929-92163546	0	+	92097929	92097929	8553170	8	293,264,165,199,139,176,65,791,	0,6349,22535,28131,30421,49054,53020,64826,
#Partially deleted in new
chr15	92126183	92171847	chr15:92126183-92171847	0	+	92126249	92147098	789624	5	76,139,176,65,68,	0,2167,20800,24766,45596,
#Partially deleted in new
chr15	92126185	92162946	chr15:92126185-92162946	0	+	92126185	92147098	789624	5	74,139,176,60,191,	0,2165,20798,24769,36570,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	92148751	92331037	chr15:92148751-92331037	3	-	92148751	92148751	8553170	4	1032,87,145,40,	0,8403,164289,182246,
#Partially deleted in new
chr15	92153562	92163208	chr15:92153562-92163208	0	+	92153562	92153562	8553170	2	59,453,	0,9193,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	92161574	92163546	chr15:92161574-92163546	0	+	92161574	92161574	8553170	1	1972,	0,
#Partially deleted in new
chr15	92162797	92172436	chr15:92162797-92172436	3	-	92162797	92162797	8553170	2	122,417,	0,9222,
#Deleted in new
chr15	92170871	92172435	chr15:92170871-92172435	0	+	92170871	92170871	8553170	1	1564,	0,
#Deleted in new
chr15	92281483	92282084	chr15:92281483-92282084	7	+	92281483	92281483	16724991	1	601,	0,
#Deleted in new
chr15	92285840	92286678	chr15:92285840-92286678	7	+	92285840	92285840	16724991	1	838,	0,
#Partially deleted in new
chr15	92393827	92468728	chr15:92393827-92468728	3	+	92394064	92464385	789624	6	335,63,129,258,294,4629,	0,36221,40419,44525,50808,70272,
#Partially deleted in new
chr15	92394040	92464385	chr15:92394040-92464385	1	+	92394064	92464385	789624	5	122,129,258,294,286,	0,40206,44312,50595,70059,
#Partially deleted in new
chr15	92394064	92464384	chr15:92394064-92464384	0	+	92394064	92464384	789624	5	98,63,258,294,285,	0,35984,44288,50571,70035,
#Deleted in new
chr15	92417546	92417689	chr15:92417546-92417689	3	+	92417546	92417546	8553170	1	143,	0,
#Partially deleted in new
chr15	92420859	92422735	chr15:92420859-92422735	7	+	92420859	92420859	16724991	2	442,532,	0,1344,
#Partially deleted in new
chr15	92434315	92445124	chr15:92434315-92445124	0	+	92434315	92434315	8553170	3	60,258,489,	0,4037,10320,
#Deleted in new
chr15	92470232	92471546	chr15:92470232-92471546	3	-	92470232	92470232	789624	2	174,306,	0,1008,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	92471653	92501117	chr15:92471653-92501117	3	+	92471653	92471653	8553170	3	869,120,760,	0,1299,28704,
#Partially deleted in new
chr15	92471920	92500842	chr15:92471920-92500842	0	+	92471920	92471920	8553170	3	602,158,485,	0,1032,28437,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	92567817	92572042	chr15:92567817-92572042	3	-	92567817	92567817	789624	4	474,71,139,857,	0,2385,2740,3368,
#Partially deleted in new
chr15	92568189	92570812	chr15:92568189-92570812	0	-	92568189	92568189	8553170	3	102,71,255,	0,2013,2368,
#Partially deleted in new
chr15	92580828	92600545	chr15:92580828-92600545	3	+	92580828	92580828	8553170	3	67,139,208,	0,254,19509,
#Deleted in new
chr15	92592573	92596388	chr15:92592573-92596388	3	-	92592573	92592573	8553170	1	3815,	0,
#Deleted in new
chr15	92595559	92596462	chr15:92595559-92596462	1	-	92595559	92595559	8553170	2	213,161,	0,742,
#Deleted in new
chr15	92598557	92600537	chr15:92598557-92600537	0	+	92598557	92598557	8553170	1	1980,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	92602909	92620015	chr15:92602909-92620015	3	+	92602909	92602909	8553170	2	168,278,	0,16828,
#Partially deleted in new
chr15	92617442	92655958	chr15:92617442-92655958	3	-	92619455	92655659	789624	3	2017,132,643,	0,12771,37873,
#Partially deleted in new
chr15	92617447	92645598	chr15:92617447-92645598	1	-	92617663	92630265	789624	3	278,132,85,	0,12766,28066,
#Partially deleted in new
chr15	92618999	92655404	chr15:92618999-92655404	1	-	92619169	92630265	789624	3	460,132,274,	0,11214,36131,
#Partially deleted in new
chr15	92619057	92639244	chr15:92619057-92639244	1	-	92619169	92630265	789624	3	402,132,87,	0,11156,20100,
#Partially deleted in new
chr15	92619118	92653210	chr15:92619118-92653210	1	-	92619169	92630265	789624	3	341,132,75,	0,11095,34017,
#Partially deleted in new
chr15	92619182	92668043	chr15:92619182-92668043	0	-	92619182	92630265	789624	3	277,132,146,	0,11031,48715,
#Partially deleted in new
chr15	92619237	92656631	chr15:92619237-92656631	0	-	92619237	92630265	789624	3	222,132,110,	0,10976,37284,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	92619301	92809798	chr15:92619301-92809798	0	-	92619301	92630256	789624	4	158,132,124,153,	0,10912,79738,190344,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	92627072	92627414	chr15:92627072-92627414	7	+	92627072	92627072	16724991	1	342,	0,
#Partially deleted in new
chr15	92630160	92655351	chr15:92630160-92655351	0	-	92630160	92630160	8553170	2	185,36,	0,25155,
#Partially deleted in new
chr15	92634304	92634665	chr15:92634304-92634665	3	+	92634304	92634304	8553170	1	361,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	92699039	92724277	chr15:92699039-92724277	3	-	92699039	92699039	8553170	2	124,116,	0,25122,
#Deleted in new
chr15	92711807	92712110	chr15:92711807-92712110	7	+	92711807	92711807	16724991	1	303,	0,
#Partially deleted in new
chr15	92715709	92734098	chr15:92715709-92734098	7	-	92715709	92715709	16724991	3	340,77,114,	0,8452,18275,
#Deleted in new
chr15	92719392	92719740	chr15:92719392-92719740	7	+	92719392	92719392	16724991	1	348,	0,
#Deleted in new
chr15	92733822	92734195	chr15:92733822-92734195	5	-	92733822	92733822	16724991	1	373,	0,
#Partially deleted in new
chr15	92762756	92763750	chr15:92762756-92763750	7	+	92762756	92762756	16724991	2	271,255,	0,739,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	92779756	92781492	chr15:92779756-92781492	3	-	92779756	92779756	8553170	1	1736,	0,
#Partially deleted in new
chr15	92782054	92809861	chr15:92782054-92809861	0	-	92782054	92782054	8553170	3	87,177,216,	0,5909,27591,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	92787913	92788472	chr15:92787913-92788472	0	-	92787913	92787913	8553170	2	172,277,	0,282,
#Partially deleted in new
chr15	92795646	92796439	chr15:92795646-92796439	7	+	92795646	92795646	16724991	1	793,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	92805769	92808567	chr15:92805769-92808567	3	-	92805769	92805769	8553170	2	345,119,	0,2679,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	92808450	92809057	chr15:92808450-92809057	3	+	92808450	92808450	8553170	1	607,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	92808843	92809884	chr15:92808843-92809884	0	-	92808843	92808843	8553170	2	170,239,	0,802,
#Deleted in new
chr15	92819597	92819992	chr15:92819597-92819992	3	+	92819597	92819597	8553170	1	395,	0,
#Partially deleted in new
chr15	92882706	92899701	chr15:92882706-92899701	3	+	92882706	92882706	789624	5	480,70,86,69,1978,	0,2808,3462,9297,15017,
#Deleted in new
chr15	92882731	92883861	chr15:92882731-92883861	1	+	92882731	92882731	8553170	2	455,277,	0,853,
#Partially deleted in new
chr15	92882861	92897975	chr15:92882861-92897975	1	+	92882861	92882861	8553170	5	325,70,86,69,252,	0,2653,3307,9142,14862,
#Deleted in new
chr15	92882873	92885584	chr15:92882873-92885584	1	+	92882873	92882873	8553170	3	313,194,70,	0,711,2641,
#Partially deleted in new
chr15	92882887	92892034	chr15:92882887-92892034	1	+	92882887	92882887	8553170	6	299,35,35,70,86,31,	0,697,856,2627,3281,9116,
#Deleted in new
chr15	92883014	92886222	chr15:92883014-92886222	1	+	92883014	92883014	8553170	4	172,194,70,54,	0,570,2500,3154,
#Partially deleted in new
chr15	92883412	92927330	chr15:92883412-92927330	3	+	92901237	92927330	789624	7	131,70,86,69,133,232,87,	0,2102,2756,8591,17754,40908,43831,
#Partially deleted in new
chr15	92884370	92898130	chr15:92884370-92898130	0	+	92884370	92884370	8553170	4	1214,86,69,407,	0,1798,7633,13353,
#Deleted in new
chr15	92885323	92886985	chr15:92885323-92886985	0	+	92885323	92885323	8553170	2	261,817,	0,845,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr15	92886202	92949230	chr15:92886202-92949230	0	+	92886202	92886202	8553170	12	52,69,133,232,87,62,108,141,134,3023,179,279,	0,5801,14964,38118,41041,42827,51315,53375,55619,56640,59835,62749,
#Partially deleted in new
chr15	92887755	92898072	chr15:92887755-92898072	1	+	92887755	92887755	8553170	3	559,69,349,	0,4248,9968,
#Boundary problem: need 38, got 0, diff 38, mapped 0.0
chr15	92900188	93022162	chr15:92900188-93022162	1	+	92901237	93020325	789624	38	636,133,232,87,62,108,141,134,226,101,45,179,125,217,90,191,189,163,153,72,150,149,97,93,171,176,42,140,139,151,123,129,141,135,179,100,214,2151,	0,978,24132,27055,28841,37329,39389,41633,42654,44226,45632,45849,48763,53168,55234,56270,67136,71576,72076,74690,78045,78946,80626,81176,84141,85309,91287,92670,96768,97064,98310,100323,101988,104428,108956,112156,114507,119823,
#Partially deleted in new
chr15	92900319	93028005	chr15:92900319-93028005	3	+	92901237	93024705	789624	39	505,133,232,87,62,108,141,134,226,101,45,179,125,217,90,191,189,163,153,72,150,149,97,93,171,176,42,140,139,151,123,129,141,135,179,100,214,247,3634,	0,847,24001,26924,28710,37198,39258,41502,42523,44095,45501,45718,48632,53037,55103,56139,67005,71445,71945,74559,77914,78815,80495,81045,84010,85178,91156,92539,96637,96933,98179,100192,101857,104297,108825,112025,114376,119692,124052,
#Deleted in new
chr15	92900320	92902402	chr15:92900320-92902402	1	+	92901237	92901375	789624	2	504,1236,	0,846,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	92900323	92947577	chr15:92900323-92947577	1	+	92901237	92946225	789624	11	501,133,232,87,62,141,134,226,101,45,1540,	0,843,23997,26920,28706,39254,41498,42519,44091,45497,45714,
#Deleted in new
chr15	92900323	92902788	chr15:92900323-92902788	1	+	92901237	92902207	789624	3	501,133,615,	0,843,1850,
#Partially deleted in new
chr15	92900323	92993235	chr15:92900323-92993235	0	+	92900323	92900323	8553170	29	501,133,232,87,62,108,141,134,226,101,45,179,125,217,90,191,189,163,153,72,150,149,97,93,171,176,42,140,69,	0,843,23997,26920,28706,37194,39254,41498,42519,44091,45497,45714,48628,53033,55099,56135,67001,71441,71941,74555,77910,78811,80491,81041,84006,85174,91152,92535,92843,
#Partially deleted in new
chr15	92900334	92949234	chr15:92900334-92949234	1	+	92901237	92949080	789624	13	490,133,232,87,62,108,141,134,226,101,45,179,283,	0,832,23986,26909,28695,37183,39243,41487,42508,44080,45486,45703,48617,
#Partially deleted in new
chr15	92900341	92937541	chr15:92900341-92937541	0	+	92927243	92937541	789624	5	483,232,87,62,24,	0,23979,26902,28688,37176,
#Deleted in new
chr15	92904398	92904475	chr15:92904398-92904475	3	+	92904398	92904398	5263520	1	77,	0,
#Partially deleted in new
chr15	92904472	92949231	chr15:92904472-92949231	1	+	92904907	92949080	789624	12	536,232,87,62,108,141,134,226,101,45,179,280,	0,19848,22771,24557,33045,35105,37349,38370,39942,41348,41565,44479,
#Partially deleted in new
chr15	92914973	92937588	chr15:92914973-92937588	0	+	92914973	92914973	8553170	5	28,232,87,62,71,	0,9347,12270,14056,22544,
#Partially deleted in new
chr15	92921376	92924385	chr15:92921376-92924385	0	+	92921376	92921376	8553170	2	81,65,	0,2944,
#Partially deleted in new
chr15	92924277	92997069	chr15:92924277-92997069	0	+	92924277	92924277	8553170	27	275,87,62,108,141,134,226,101,45,179,125,980,90,191,189,163,153,72,150,149,97,93,171,176,42,140,113,	0,2966,4752,13240,15300,17544,18565,20137,21543,21760,24674,29079,31145,32181,43047,47487,47987,50601,53956,54857,56537,57087,60052,61220,67198,68581,72679,
#Partially deleted in new
chr15	92939653	92949228	chr15:92939653-92949228	0	+	92939653	92946291	789624	8	65,134,226,101,45,45,93,277,	0,2168,3189,4761,6167,6384,6594,9298,
#Partially deleted in new
chr15	92939655	93000635	chr15:92939655-93000635	0	+	92939655	92991425	789624	26	63,134,226,101,45,179,125,217,90,191,189,163,153,72,150,149,97,93,171,176,84,140,139,151,123,124,	0,2166,3187,4759,6165,6382,9296,13701,15767,16803,27669,32109,32609,35223,38578,39479,41159,41709,44674,45842,51691,53203,57301,57597,58843,60856,
#Partially deleted in new
chr15	92942939	92946168	chr15:92942939-92946168	0	+	92942939	92946168	789624	3	129,101,131,	0,1475,3098,
#Partially deleted in new
chr15	92945839	92949229	chr15:92945839-92949229	0	+	92945839	92946225	789624	3	26,303,278,	0,198,3112,
#Partially deleted in new
chr15	92950401	92967341	chr15:92950401-92967341	0	+	92950401	92950401	8553170	5	30,217,90,191,17,	0,2955,5021,6057,16923,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	92956551	92965373	chr15:92956551-92965373	0	+	92956551	92956551	8553170	2	98,132,	0,8690,
#Partially deleted in new
chr15	92971882	92979207	chr15:92971882-92979207	0	+	92971882	92979207	789624	4	45,72,150,73,	0,2996,6351,7252,
#Partially deleted in new
chr15	92971882	92979213	chr15:92971882-92979213	0	+	92971882	92971882	8553170	5	45,153,72,236,79,	0,382,2996,6265,7252,
#Deleted in new
chr15	92973988	92974925	chr15:92973988-92974925	0	+	92973988	92973988	8553170	2	53,47,	0,890,
#Partially deleted in new
chr15	92974728	93002234	chr15:92974728-93002234	0	+	92974728	92974728	8553170	15	65,72,150,149,97,93,171,176,42,140,139,151,123,129,58,	0,150,3505,4406,6086,6636,9601,10769,16747,18130,22228,22524,23770,25783,27448,
#Partially deleted in new
chr15	92984458	93000535	chr15:92984458-93000535	0	+	92984458	92991729	789624	9	42,176,42,67,140,139,151,123,24,	0,1039,7017,7234,8400,12498,12794,14040,16053,
#Deleted in new
chr15	92996953	92997643	chr15:92996953-92997643	0	+	92996953	92996953	8553170	2	142,391,	0,299,
#Partially deleted in new
chr15	92997071	93027942	chr15:92997071-93027942	0	+	92997071	92998205	789624	12	24,151,113,123,129,141,135,179,100,214,247,3571,	0,181,1077,1427,3440,5105,7545,12073,15273,17624,22940,27300,
#Partially deleted in new
chr15	92997301	93004646	chr15:92997301-93004646	0	+	92997301	92998143	789624	6	102,124,123,129,141,30,	0,836,1197,3210,4875,7315,
#Deleted in new
chr15	92997315	92998002	chr15:92997315-92998002	0	+	92997315	92997315	8553170	2	88,12,	0,675,
#Partially deleted in new
chr15	93004512	93009357	chr15:93004512-93009357	0	+	93004512	93004512	8553170	2	239,213,	0,4632,
#Partially deleted in new
chr15	93012427	93024742	chr15:93012427-93024742	0	+	93012427	93014871	789624	5	17,31,94,247,371,	0,2268,2388,7584,11944,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	93035272	93089204	chr15:93035272-93089204	3	-	93044997	93088932	789624	4	10433,515,116,286,	0,16720,37643,53646,
#Partially deleted in new
chr15	93043405	93073710	chr15:93043405-93073710	1	-	93044997	93072997	789624	4	2300,515,116,147,	0,8587,29510,30158,
#Partially deleted in new
chr15	93043405	93088523	chr15:93043405-93088523	1	-	93044997	93072997	789624	4	2300,515,116,243,	0,8587,29510,44875,
#Partially deleted in new
chr15	93043415	93073148	chr15:93043415-93073148	1	-	93044997	93072997	789624	3	2290,515,233,	0,8577,29500,
#Partially deleted in new
chr15	93043416	93073680	chr15:93043416-93073680	0	-	93066151	93072997	789624	5	2289,515,155,116,97,	0,8576,22684,29499,30167,
#Partially deleted in new
chr15	93044748	93058841	chr15:93044748-93058841	0	-	93044748	93044748	8553170	3	957,515,80,	0,7244,14013,
#Partially deleted in new
chr15	93044817	93074128	chr15:93044817-93074128	1	-	93044997	93073756	789624	4	888,515,116,410,	0,7175,28098,28901,
#Partially deleted in new
chr15	93044946	93073145	chr15:93044946-93073145	1	-	93045646	93072997	789624	2	759,230,	0,27969,
#Partially deleted in new
chr15	93044955	93073663	chr15:93044955-93073663	1	-	93044997	93052310	789624	5	750,515,428,116,80,	0,7037,20876,27960,28628,
#Partially deleted in new
chr15	93052271	93063069	chr15:93052271-93063069	0	-	93052271	93052271	8553170	2	236,316,	0,10482,
#Partially deleted in new
chr15	93052319	93088523	chr15:93052319-93088523	0	-	93052319	93072997	789624	3	188,116,243,	0,20596,35961,
#Partially deleted in new
chr15	93065585	93066606	chr15:93065585-93066606	7	-	93065585	93065585	16724991	1	1021,	0,
#Partially deleted in new
chr15	93066005	93073134	chr15:93066005-93073134	0	-	93066005	93066005	8553170	2	254,219,	0,6910,
#Partially deleted in new
chr15	93072966	93088653	chr15:93072966-93088653	0	-	93072966	93072997	789624	2	65,255,	0,15432,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	93177268	93179999	chr15:93177268-93179999	3	-	93177268	93177268	8553170	2	1690,336,	0,2395,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	93206065	93208048	chr15:93206065-93208048	3	+	93206065	93206065	8553170	1	1983,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	93257197	93260475	chr15:93257197-93260475	3	+	93257197	93257197	8553170	2	354,328,	0,2950,
#Deleted in new
chr15	93301415	93301647	chr15:93301415-93301647	7	-	93301415	93301415	16724991	1	232,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	93312556	93554870	chr15:93312556-93554870	3	+	93312556	93312556	8553170	4	421,124,201,1266,	0,9666,217680,241048,
#Partially deleted in new
chr15	93312556	93530262	chr15:93312556-93530262	0	+	93312556	93312556	8553170	3	421,124,26,	0,9666,217680,
#Partially deleted in new
chr15	93313101	93530414	chr15:93313101-93530414	0	+	93313101	93313101	8553170	4	298,124,76,178,	0,9121,60408,217135,
#Partially deleted in new
chr15	93313185	93499453	chr15:93313185-93499453	1	+	93313185	93313185	8553170	4	214,76,98,933,	0,60324,183048,185335,
#Partially deleted in new
chr15	93313205	93569483	chr15:93313205-93569483	0	+	93313205	93313205	8553170	4	194,124,214,46,	0,9017,244266,256232,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	93416849	93422576	chr15:93416849-93422576	3	-	93416849	93416849	8553170	2	2245,39,	0,5688,
#Deleted in new
chr15	93430658	93431217	chr15:93430658-93431217	7	-	93430658	93430658	16724991	1	559,	0,
#Partially deleted in new
chr15	93589866	93760799	chr15:93589866-93760799	3	+	93589866	93589866	8553170	4	112,152,60,133,	0,2715,3433,170800,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	93718541	93900599	chr15:93718541-93900599	3	-	93718541	93718541	8553170	7	2424,3,513,110,108,73,249,	0,12807,42073,102449,148395,180722,181809,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	93761054	93829174	chr15:93761054-93829174	1	-	93761054	93761054	8553170	4	73,183,110,195,	0,40390,59936,67925,
#Deleted in new
chr15	93825057	93825159	chr15:93825057-93825159	7	-	93825057	93825057	16724991	1	102,	0,
#Partially deleted in new
chr15	93837610	93852981	chr15:93837610-93852981	3	-	93837610	93837610	8553170	2	278,164,	0,15207,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	93863108	93878356	chr15:93863108-93878356	3	+	93863108	93863108	8553170	5	108,414,268,143,323,	0,633,2272,6582,14925,
#Deleted in new
chr15	93865506	93867715	chr15:93865506-93867715	0	+	93865506	93865506	8553170	2	142,316,	0,1893,
#Partially deleted in new
chr15	93865575	93878356	chr15:93865575-93878356	0	+	93865575	93865575	8553170	2	73,323,	0,12458,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	93874309	93900137	chr15:93874309-93900137	0	-	93874309	93874309	8553170	3	144,73,102,	0,24954,25726,
#Partially deleted in new
chr15	93882081	93886743	chr15:93882081-93886743	3	+	93882081	93882081	8553170	3	113,234,568,	0,757,4094,
#Partially deleted in new
chr15	93896058	93897451	chr15:93896058-93897451	1	-	93896058	93896058	8553170	2	371,29,	0,1364,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	93896263	93900137	chr15:93896263-93900137	0	-	93896263	93896263	8553170	3	166,73,102,	0,3000,3772,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr15	93905404	94107938	chr15:93905404-94107938	3	-	93905404	93905404	789624	9	916,86,157,249,411,129,84,1081,60,	0,42092,43660,57279,69591,77488,96271,176870,202474,
#Partially deleted in new
chr15	94028464	94070820	chr15:94028464-94070820	1	-	94028464	94028464	8553170	4	274,109,111,297,	0,1828,38304,42059,
#Deleted in new
chr15	94033657	94034177	chr15:94033657-94034177	7	+	94033657	94033657	16724991	1	520,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	94064368	94070820	chr15:94064368-94070820	0	-	94064368	94064368	8553170	3	924,111,297,	0,2400,6155,
#Partially deleted in new
chr15	94082895	94099350	chr15:94082895-94099350	0	-	94082895	94082895	8553170	2	460,94,	0,16361,
#Deleted in new
chr15	94168348	94168751	chr15:94168348-94168751	7	+	94168348	94168348	16724991	1	403,	0,
#Partially deleted in new
chr15	94231537	94358606	chr15:94231537-94358606	1	+	94298265	94358567	789624	10	127,530,63,109,143,77,112,36,165,60,	0,66663,82744,83991,107752,108661,109275,113591,124599,127009,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	94231571	94344057	chr15:94231571-94344057	0	+	94231571	94231571	8553170	8	93,114,530,63,109,143,77,3245,	0,61279,66629,82710,83957,107718,108627,109241,
#Partially deleted in new
chr15	94231571	94314344	chr15:94231571-94314344	0	+	94231571	94231571	8553170	4	93,110,530,63,	0,46582,66629,82710,
#Partially deleted in new
chr15	94231721	94480403	chr15:94231721-94480403	0	+	94298265	94314798	0	24	284,530,63,138,109,143,77,112,36,165,131,187,94,103,103,102,75,120,123,42,110,110,98,1438,	0,66479,82560,83005,83807,107568,108477,109091,113407,124415,126760,135883,138365,152300,153701,167239,168199,170178,208454,211197,226415,238611,244974,247244,
#Deleted in new
chr15	94273495	94274005	chr15:94273495-94274005	7	+	94273495	94273495	16724991	2	226,209,	0,301,
#Partially deleted in new
chr15	94298265	94483952	chr15:94298265-94483952	3	+	94298265	94479034	0	22	465,63,109,143,77,112,36,165,131,187,94,103,103,102,75,120,123,42,110,110,98,4987,	0,16016,17263,41024,41933,42547,46863,57871,60216,69339,71821,85756,87157,100695,101655,103634,141910,144653,159871,172067,178430,180700,
#Partially deleted in new
chr15	94298265	94479034	chr15:94298265-94479034	1	+	94298265	94479034	0	20	465,63,109,143,77,112,36,165,131,187,94,103,103,102,75,120,110,110,98,69,	0,16016,17263,41024,41933,42547,46863,57871,60216,69339,71821,85756,87157,100695,101655,103634,159871,172067,178430,180700,
#Partially deleted in new
chr15	94355973	94403264	chr15:94355973-94403264	1	+	94358547	94402557	0	10	328,66,187,94,103,103,102,75,120,779,	0,2573,11631,14113,28048,29449,42987,43947,45926,46512,
#Partially deleted in new
chr15	94399530	94402019	chr15:94399530-94402019	0	+	94399530	94399530	8553170	2	465,120,	0,2369,
#Deleted in new
chr15	94476379	94479583	chr15:94476379-94479583	0	+	94476379	94476379	8553170	3	120,98,618,	0,316,2586,
#Partially deleted in new
chr15	94583505	94589259	chr15:94583505-94589259	3	-	94583505	94583505	8553170	3	540,72,163,	0,1248,5591,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	94600013	94600821	chr15:94600013-94600821	3	+	94600013	94600013	8553170	2	588,60,	0,748,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	94841058	95025855	chr15:94841058-95025855	5	+	94841058	94841058	16724991	4	193,176,74,282,	0,179985,183926,184515,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	94841085	95025894	chr15:94841085-95025894	6	+	94841085	94841085	16724991	11	166,93,209,128,232,67,61,248,176,74,321,	0,60626,60826,63354,82925,153088,155313,177710,179958,183899,184488,
#Partially deleted in new
chr15	94855473	94856912	chr15:94855473-94856912	5	+	94855473	94855473	16724991	1	1439,	0,
#Partially deleted in new
chr15	94855585	94857011	chr15:94855585-94857011	3	-	94855585	94855585	8553170	2	182,293,	0,1133,
#Partially deleted in new
chr15	94856533	95021128	chr15:94856533-95021128	4	+	94856533	94856533	16724991	3	330,74,85,	0,162262,164510,
#Partially deleted in new
chr15	94856789	95122990	chr15:94856789-95122990	4	+	94856789	94856789	16724991	5	74,176,74,110,66,	0,164254,168195,212090,266135,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	94856847	95025084	chr15:94856847-95025084	4	+	94856847	94856847	16724991	5	16,93,128,176,100,	0,44864,47592,164196,168137,
#Partially deleted in new
chr15	95025023	95159738	chr15:95025023-95159738	4	+	95025023	95025023	16724991	6	35,110,89,116,290,58,	0,43856,97901,127686,133062,134657,
#Deleted in new
chr15	95034383	95035737	chr15:95034383-95035737	3	-	95034383	95034383	8553170	2	361,354,	0,1000,
#Partially deleted in new
chr15	95080094	95132859	chr15:95080094-95132859	3	-	95080094	95080094	8553170	3	167,140,266,	0,12036,52499,
#Partially deleted in new
chr15	95158228	95169864	chr15:95158228-95169864	5	+	95158228	95158228	16724991	3	147,128,227,	0,2051,11409,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	95209098	95256705	chr15:95209098-95256705	1	-	95209098	95209098	8553170	3	1543,199,32,	0,3582,47575,
#Deleted in new
chr15	95225325	95225864	chr15:95225325-95225864	3	-	95225325	95225325	8553170	1	539,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	95255505	95326999	chr15:95255505-95326999	3	-	95255505	95255505	8553170	5	383,103,167,133,170,	0,1168,32796,33916,71324,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	95274039	95289485	chr15:95274039-95289485	1	-	95274039	95274039	8553170	3	3337,167,64,	0,14262,15382,
#Partially deleted in new
chr15	95279283	95327100	chr15:95279283-95327100	0	-	95279283	95279283	5263520	4	813,167,133,271,	0,9018,10138,47546,
#Deleted in new
chr15	95280752	95284249	chr15:95280752-95284249	3	-	95280752	95280752	8553170	1	3497,	0,
#Deleted in new
chr15	95287933	95291643	chr15:95287933-95291643	3	+	95287933	95287933	8553170	2	429,1116,	0,2594,
#Partially deleted in new
chr15	95288287	95327129	chr15:95288287-95327129	0	-	95288287	95288287	8553170	3	181,133,300,	0,1134,38542,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	95326527	95507010	chr15:95326527-95507010	0	+	95326527	95326527	8553170	7	110,139,110,320,87,144,957,	0,125270,127236,171153,171865,174980,179526,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	95433094	95506114	chr15:95433094-95506114	0	+	95433094	95433094	8553170	6	85,142,110,320,144,61,	0,18700,20669,64586,68413,72959,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	95433094	95507847	chr15:95433094-95507847	3	+	95433094	95433094	789624	7	85,142,110,320,87,144,1794,	0,18700,20669,64586,65298,68413,72959,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	95638345	95716626	chr15:95638345-95716626	1	+	95638345	95638345	8553170	3	174,81,234,	0,74231,78047,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	95638348	95825356	chr15:95638348-95825356	3	+	95638348	95638348	8553170	4	171,79,38,168,	0,92015,171730,186840,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	95638349	95825451	chr15:95638349-95825451	0	+	95638349	95638349	8553170	3	170,79,263,	0,92014,186839,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	95638349	95779384	chr15:95638349-95779384	0	+	95638349	95638349	8553170	3	170,79,249,	0,92014,140786,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	95638493	95716890	chr15:95638493-95716890	1	+	95638493	95638493	8553170	2	26,498,	0,77899,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	95745803	95745994	chr15:95745803-95745994	3	+	95745803	95745803	8553170	1	191,	0,
#Partially deleted in new
chr15	95990581	96300990	chr15:95990581-96300990	3	+	95990581	95990581	8553170	4	303,71,80,297,	0,236691,261544,310112,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	96045340	96064357	chr15:96045340-96064357	0	-	96045340	96045340	8553170	4	212,107,1162,81,	0,1448,3193,18936,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	96045340	96064357	chr15:96045340-96064357	3	-	96045340	96045340	8553170	5	212,107,1162,73,81,	0,1448,3193,17343,18936,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	96080712	96084584	chr15:96080712-96084584	3	-	96080712	96080712	8553170	2	2740,57,	0,3815,
#Partially deleted in new
chr15	96110039	96126008	chr15:96110039-96126008	0	-	96110039	96110039	8553170	3	353,141,24,	0,11791,15945,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	96112627	96116051	chr15:96112627-96116051	3	-	96112627	96112627	8553170	1	3424,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	96118842	96135469	chr15:96118842-96135469	1	-	96118842	96118842	8553170	7	134,141,131,252,241,157,167,	0,2988,7142,8319,12979,13697,16460,
#Partially deleted in new
chr15	96127368	96327021	chr15:96127368-96327021	3	-	96127368	96127368	789624	5	45,241,43,154,66,	0,4453,63983,163261,199587,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	96139471	96140452	chr15:96139471-96140452	3	-	96139471	96139471	8553170	1	981,	0,
#Partially deleted in new
chr15	96153415	96223055	chr15:96153415-96223055	1	-	96153415	96153415	8553170	6	196,97,245,170,43,254,	0,3070,5453,9106,37936,69386,
#Deleted in new
chr15	96171580	96173946	chr15:96171580-96173946	1	+	96171580	96171580	8553170	3	65,98,195,	0,1823,2171,
#Deleted in new
chr15	96171594	96174339	chr15:96171594-96174339	3	+	96171594	96171594	8553170	2	51,588,	0,2157,
#Deleted in new
chr15	96230896	96231145	chr15:96230896-96231145	3	+	96230896	96230896	8553170	1	249,	0,
#Deleted in new
chr15	96232113	96232680	chr15:96232113-96232680	0	-	96232113	96232113	8553170	1	567,	0,
#Partially deleted in new
chr15	96232428	96282855	chr15:96232428-96282855	0	-	96232428	96232428	8553170	4	157,149,96,24,	0,37419,39274,50403,
#Partially deleted in new
chr15	96266385	96282971	chr15:96266385-96282971	1	-	96266385	96266385	8553170	4	204,149,96,140,	0,3462,5317,16446,
#Partially deleted in new
chr15	96266528	96275996	chr15:96266528-96275996	1	-	96266528	96266528	8553170	5	61,149,96,55,80,	0,3319,5174,6233,9388,
#Partially deleted in new
chr15	96268771	96327361	chr15:96268771-96327361	1	-	96268771	96268771	8553170	6	1225,96,158,134,154,163,	0,2931,14060,16554,21858,58427,
#Partially deleted in new
chr15	96269814	96327348	chr15:96269814-96327348	1	-	96269814	96269814	789624	7	182,96,158,134,92,154,150,	0,1888,13017,15511,18849,20815,57384,
#Partially deleted in new
chr15	96272795	96322645	chr15:96272795-96322645	1	-	96272795	96272795	8553170	5	21,158,134,154,107,	0,10036,12530,17834,49743,
#Partially deleted in new
chr15	96282923	96327116	chr15:96282923-96327116	0	-	96282923	96282923	8553170	4	66,134,154,161,	0,2402,7706,44032,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	96285067	96289265	chr15:96285067-96289265	3	-	96285067	96285067	8553170	1	4198,	0,
#Partially deleted in new
chr15	96285225	96327357	chr15:96285225-96327357	1	-	96285225	96285225	8553170	3	234,154,159,	0,5404,41973,
#Partially deleted in new
chr15	96290443	96327097	chr15:96290443-96327097	0	-	96290443	96290443	8553170	2	340,142,	0,36512,
#Partially deleted in new
chr15	96290444	96327327	chr15:96290444-96327327	0	-	96290444	96290444	789624	2	339,129,	0,36754,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	96294934	96298023	chr15:96294934-96298023	3	-	96294934	96294934	8553170	1	3089,	0,
#Deleted in new
chr15	96325937	96338618	chr15:96325937-96338618	1	+	96326309	96337622	0	3	415,528,1271,	0,8138,11410,
#Deleted in new
chr15	96330716	96340263	chr15:96330716-96340263	3	+	96332105	96337622	0	3	1831,528,2916,	0,3359,6631,
#Deleted in new
chr15	96332536	96334372	chr15:96332536-96334372	0	+	96334092	96334372	789624	2	85,297,	0,1539,
#Deleted in new
chr15	96332564	96340263	chr15:96332564-96340263	1	+	96334092	96337622	0	3	57,528,2916,	0,1511,4783,
#Deleted in new
chr15	96333162	96337836	chr15:96333162-96337836	1	+	96334092	96337622	0	3	695,528,489,	0,913,4185,
#Deleted in new
chr15	96333260	96333307	chr15:96333260-96333307	3	+	96333260	96333260	5263520	1	47,	0,
#Deleted in new
chr15	96342952	96345651	chr15:96342952-96345651	3	+	96342952	96342952	8553170	2	46,1087,	0,1612,
#Partially deleted in new
chr15	96354236	96403803	chr15:96354236-96403803	0	+	96354236	96354236	8553170	2	276,294,	0,49273,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	96354389	96395016	chr15:96354389-96395016	3	+	96354389	96354389	8553170	2	123,4733,	0,35894,
#Deleted in new
chr15	96388213	96389056	chr15:96388213-96389056	7	-	96388213	96388213	16724991	1	843,	0,
#Partially deleted in new
chr15	96393145	96405189	chr15:96393145-96405189	1	-	96393145	96393145	8553170	3	286,196,80,	0,9285,11964,
#Partially deleted in new
chr15	96393173	96396186	chr15:96393173-96396186	1	-	96393173	96393173	8553170	2	258,131,	0,2882,
#Partially deleted in new
chr15	96393173	96405182	chr15:96393173-96405182	0	-	96393173	96393173	8553170	2	258,73,	0,11936,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	96438569	96444266	chr15:96438569-96444266	3	+	96438569	96438569	8553170	2	235,317,	0,5380,
#Deleted in new
chr15	96441565	96442313	chr15:96441565-96442313	7	-	96441565	96441565	16724991	1	748,	0,
#Deleted in new
chr15	96448153	96448493	chr15:96448153-96448493	7	+	96448153	96448153	16724991	1	340,	0,
#Deleted in new
chr15	96448841	96449749	chr15:96448841-96449749	3	+	96448841	96448841	8553170	2	336,206,	0,702,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	96486581	96486891	chr15:96486581-96486891	3	+	96486581	96486581	8553170	1	310,	0,
#Deleted in new
chr15	96551380	96551517	chr15:96551380-96551517	7	+	96551380	96551380	16724991	1	137,	0,
#Deleted in new
chr15	96756986	96758596	chr15:96756986-96758596	7	+	96756986	96756986	16724991	1	1610,	0,
#Partially deleted in new
chr15	96772004	96781654	chr15:96772004-96781654	1	-	96772004	96772004	789624	3	259,100,33,	0,741,9617,
#Partially deleted in new
chr15	96772006	96783312	chr15:96772006-96783312	3	-	96772006	96772006	789624	4	130,100,102,133,	0,739,8994,11173,
#Deleted in new
chr15	96783388	96785615	chr15:96783388-96785615	0	+	96783388	96783388	8553170	3	356,107,620,	0,764,1607,
#Deleted in new
chr15	96783445	96785614	chr15:96783445-96785614	3	+	96783655	96785117	789624	3	299,107,619,	0,707,1550,
#Deleted in new
chr15	96783448	96785075	chr15:96783448-96785075	0	+	96783448	96783448	8553170	3	382,107,80,	0,704,1547,
#Deleted in new
chr15	96783473	96785178	chr15:96783473-96785178	0	+	96783473	96783473	8553170	3	116,107,183,	0,679,1522,
#Deleted in new
chr15	96783486	96785608	chr15:96783486-96785608	0	+	96783486	96783486	8553170	2	773,613,	0,1509,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	96842068	96842384	chr15:96842068-96842384	3	+	96842068	96842068	8553170	1	316,	0,
#Partially deleted in new
chr15	97272176	97319288	chr15:97272176-97319288	3	-	97272176	97272176	8553170	3	348,53,53,	0,45467,47059,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	97295880	97415824	chr15:97295880-97415824	3	+	97295880	97295880	8553170	3	443,87,35,	0,115311,119909,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	97353496	97353815	chr15:97353496-97353815	3	+	97353496	97353496	8553170	1	319,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	97370370	97521811	chr15:97370370-97521811	3	-	97370370	97370370	789624	5	971,84,302,138,231,	0,27286,57280,144916,151210,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	97411254	97432094	chr15:97411254-97432094	1	+	97411254	97411254	8553170	3	24,120,304,	0,18515,20536,
#Deleted in new
chr15	97472125	97472252	chr15:97472125-97472252	7	-	97472125	97472125	16724991	1	127,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	97533737	97541476	chr15:97533737-97541476	3	-	97533737	97533737	8553170	1	7739,	0,
#Partially deleted in new
chr15	97540596	97559011	chr15:97540596-97559011	3	-	97540596	97540596	8553170	3	270,109,111,	0,1043,18304,
#Partially deleted in new
chr15	97553283	97560702	chr15:97553283-97560702	1	-	97553283	97553283	789624	4	375,184,198,644,	0,1035,5617,6775,
#Partially deleted in new
chr15	97572184	97704022	chr15:97572184-97704022	1	-	97572184	97572184	8553170	5	434,87,143,174,94,	0,4323,79867,80865,131744,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	97629205	97835939	chr15:97629205-97835939	1	-	97629205	97629205	8553170	10	2018,143,174,154,142,107,145,167,172,46,	0,22846,23844,114124,123703,126537,127199,128403,129284,206688,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	97631022	97653208	chr15:97631022-97653208	1	-	97631022	97631022	8553170	3	201,139,163,	0,21029,22023,
#Partially deleted in new
chr15	97647982	97652148	chr15:97647982-97652148	1	-	97647982	97647982	8553170	2	422,97,	0,4069,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	97665623	97874550	chr15:97665623-97874550	3	-	97665623	97665623	8553170	6	92,180,67,154,90,598,	0,38305,39837,77706,143368,208329,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	97742217	97874550	chr15:97742217-97874550	1	-	97742217	97742217	789624	3	1266,172,598,	0,16272,131735,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	97742621	97874550	chr15:97742621-97874550	0	-	97742621	97742621	789624	2	862,598,	0,131331,
#Partially deleted in new
chr15	97838813	97874005	chr15:97838813-97874005	1	-	97838813	97838813	8553170	2	306,53,	0,35139,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	97876288	97878386	chr15:97876288-97878386	3	+	97876288	97876288	8553170	1	2098,	0,
#Partially deleted in new
chr15	97960697	97973838	chr15:97960697-97973838	3	+	97960861	97971187	789624	8	471,67,148,103,257,163,155,2708,	0,4902,5197,7316,8425,9185,9891,10433,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	97982508	97991142	chr15:97982508-97991142	3	-	97982508	97982508	8553170	4	737,74,208,944,	0,827,2410,7690,
#Partially deleted in new
chr15	98003080	98021777	chr15:98003080-98021777	3	+	98003080	98003080	8553170	5	193,81,126,233,591,	0,299,3963,17375,18106,
#Partially deleted in new
chr15	98003088	98087384	chr15:98003088-98087384	0	+	98003088	98003088	8553170	4	185,126,81,247,	0,3955,17367,84049,
#Deleted in new
chr15	98026041	98026139	chr15:98026041-98026139	3	+	98026041	98026041	8553170	1	98,	0,
#Partially deleted in new
chr15	98046666	98293177	chr15:98046666-98293177	3	-	98046666	98046666	8553170	4	73,90,89,112,	0,210912,244945,246399,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	98074666	98074763	chr15:98074666-98074763	3	-	98074666	98074666	8553170	1	97,	0,
#Partially deleted in new
chr15	98085626	98088809	chr15:98085626-98088809	1	-	98085626	98085626	8553170	2	148,304,	0,2879,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	98085692	98103712	chr15:98085692-98103712	3	-	98085692	98085692	8553170	2	82,478,	0,17542,
#Deleted in new
chr15	98118170	98118320	chr15:98118170-98118320	7	+	98118170	98118170	16724991	1	150,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	98122562	98131607	chr15:98122562-98131607	3	-	98122562	98122562	8553170	2	236,174,	0,8871,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	98282074	98285907	chr15:98282074-98285907	3	+	98282074	98282074	8553170	3	46,251,88,	0,1983,3745,
#Deleted in new
chr15	98319686	98320237	chr15:98319686-98320237	3	-	98319686	98319686	8553170	1	551,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	98324272	98327494	chr15:98324272-98327494	3	-	98324272	98324272	8553170	2	148,141,	0,3081,
#Partially deleted in new
chr15	98437161	98514382	chr15:98437161-98514382	0	-	98437161	98437161	8553170	7	2589,92,183,178,86,80,90,	0,3909,14666,43438,48730,76595,77131,
#Partially deleted in new
chr15	98439630	98485897	chr15:98439630-98485897	3	-	98439630	98485897	789624	5	120,92,183,178,6,	0,1440,12197,40969,46261,
#Partially deleted in new
chr15	98441070	98520386	chr15:98441070-98520386	4	-	98441070	98441070	16724991	6	92,134,183,178,86,131,	0,4924,10757,39529,44821,79185,
#Partially deleted in new
chr15	98466839	98467412	chr15:98466839-98467412	7	+	98466839	98466839	16724991	1	573,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	98518799	98547728	chr15:98518799-98547728	0	-	98518799	98518799	8553170	3	93,134,574,	0,1456,28355,
#Deleted in new
chr15	98646950	98647371	chr15:98646950-98647371	3	-	98646950	98646950	8553170	2	243,91,	0,330,
#Partially deleted in new
chr15	98648538	98964530	chr15:98648538-98964530	1	+	98649581	98957442	789624	21	1137,546,313,149,145,215,127,239,168,205,284,137,160,100,71,230,111,160,130,135,7470,	0,59023,242786,248218,250938,260146,262776,264505,267425,268133,273609,275337,275986,281022,281696,286285,286777,290662,294384,300035,308522,
#Partially deleted in new
chr15	98648538	98964530	chr15:98648538-98964530	3	+	98649581	98957442	789624	21	1137,546,313,149,145,215,127,239,168,205,284,137,160,103,71,230,111,160,130,135,7470,	0,59023,242786,248218,250938,260146,262776,264505,267425,268133,273609,275337,275986,281019,281696,286285,286777,290662,294384,300035,308522,
#Partially deleted in new
chr15	98648970	98964530	chr15:98648970-98964530	1	+	98649581	98957442	0	21	705,546,313,149,145,215,127,239,168,205,284,137,160,103,71,230,111,160,130,135,7470,	0,58591,242354,247786,250506,259714,262344,264073,266993,267701,273177,274905,275554,280587,281264,285853,286345,290230,293952,299603,308090,
#Partially deleted in new
chr15	98649043	98964529	chr15:98649043-98964529	1	+	98649581	98957442	789624	21	632,546,313,149,145,215,127,239,168,205,284,137,160,100,71,230,111,160,130,135,7469,	0,58518,242281,247713,250433,259641,262271,264000,266920,267628,273104,274832,275481,280517,281191,285780,286272,290157,293879,299530,308017,
#Partially deleted in new
chr15	98649581	98916955	chr15:98649581-98916955	0	+	98649581	98649581	8553170	10	94,546,313,149,145,215,127,239,168,284,	0,57980,241743,247175,249895,259103,261733,263462,266382,267090,
#Deleted in new
chr15	98660209	98660668	chr15:98660209-98660668	3	+	98660209	98660209	8553170	1	459,	0,
#Partially deleted in new
chr15	98707830	98891619	chr15:98707830-98891619	0	+	98707830	98891619	789624	2	277,295,	0,183494,
#Partially deleted in new
chr15	98734711	98899546	chr15:98734711-98899546	0	+	98734711	98734711	8553170	4	42,313,149,70,	0,156613,162045,164765,
#Deleted in new
chr15	98784425	98784502	chr15:98784425-98784502	3	+	98784425	98784425	5263520	1	77,	0,
#Partially deleted in new
chr15	98820865	98896919	chr15:98820865-98896919	0	+	98820865	98820865	8553170	3	75,313,163,	0,70459,75891,
#Partially deleted in new
chr15	98820883	98896849	chr15:98820883-98896849	0	+	98820883	98820883	8553170	4	57,63,313,93,	0,3296,70441,75873,
#Partially deleted in new
chr15	98873718	98896889	chr15:98873718-98896889	0	+	98873718	98873718	8553170	3	137,313,133,	0,17606,23038,
#Partially deleted in new
chr15	98880658	98893535	chr15:98880658-98893535	3	-	98880658	98880658	8553170	2	194,69,	0,12808,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	98890541	98896886	chr15:98890541-98896886	0	+	98890541	98890541	8553170	3	214,313,130,	0,783,6215,
#Partially deleted in new
chr15	98897285	98899576	chr15:98897285-98899576	0	+	98897285	98897285	8553170	2	203,100,	0,2191,
#Partially deleted in new
chr15	98900609	98913114	chr15:98900609-98913114	0	+	98900609	98900609	8553170	4	154,215,127,71,	0,8075,10705,12434,
#Partially deleted in new
chr15	98913175	98922242	chr15:98913175-98922242	0	+	98913175	98916717	789624	4	107,118,205,95,	0,2838,3496,8972,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	98916484	98923881	chr15:98916484-98923881	0	+	98916484	98916484	8553170	3	392,284,6,	0,5663,7391,
#Deleted in new
chr15	98923781	98924636	chr15:98923781-98924636	0	+	98923781	98923781	8553170	2	231,112,	0,743,
#Partially deleted in new
chr15	98924599	98935366	chr15:98924599-98935366	0	+	98924599	98924599	8553170	4	85,103,71,51,	0,4958,5635,10716,
#Deleted in new
chr15	98952794	98957292	chr15:98952794-98957292	0	+	98952794	98952794	8553170	2	316,232,	0,4266,
#Partially deleted in new
chr15	98954148	99105824	chr15:98954148-99105824	3	-	98954148	98954148	8553170	4	240,82,129,137,	0,11840,146574,151539,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	98968229	99007795	chr15:98968229-99007795	1	-	98968477	98969633	789624	5	468,227,123,228,437,	0,1195,2806,37199,39129,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	98968279	99005562	chr15:98968279-99005562	3	-	98968477	99001207	789624	5	418,227,123,93,134,	0,1145,2756,32907,37149,
#Partially deleted in new
chr15	98968522	99005462	chr15:98968522-99005462	0	-	98968522	99005462	789624	5	175,227,123,53,34,	0,902,2513,29588,36906,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	99028537	99031053	chr15:99028537-99031053	3	+	99028537	99028537	8553170	1	2516,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	99098216	99135593	chr15:99098216-99135593	1	+	99113638	99133058	789624	5	421,125,71,2447,2844,	0,15374,28505,31150,34533,
#Partially deleted in new
chr15	99105034	99135589	chr15:99105034-99135589	3	+	99105199	99133058	789624	4	975,125,71,6223,	0,8556,21687,24332,
#Partially deleted in new
chr15	99105079	99135583	chr15:99105079-99135583	1	+	99105199	99132763	789624	4	930,125,71,2834,	0,8511,21642,27670,
#Partially deleted in new
chr15	99105079	99135583	chr15:99105079-99135583	1	+	99105199	99133058	789624	5	930,125,71,2447,2834,	0,8511,21642,24287,27670,
#Deleted in new
chr15	99128831	99131806	chr15:99128831-99131806	3	-	99128831	99128831	8553170	2	1558,1004,	0,1971,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr15	99136322	99249558	chr15:99136322-99249558	1	-	99138009	99228712	789624	14	1805,83,150,128,106,178,126,151,124,200,93,195,122,388,	0,2994,19825,25417,38727,63596,82265,82575,85418,92210,98665,105042,109066,112848,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr15	99136322	99249518	chr15:99136322-99249518	0	-	99139428	99228712	789624	13	1805,151,150,128,106,178,126,151,124,200,195,122,102,	0,2994,19825,25417,38727,63596,82265,82575,85418,92210,105042,109066,113094,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr15	99136323	99241562	chr15:99136323-99241562	1	-	99139428	99228712	789624	11	1804,151,150,128,106,178,126,151,124,200,198,	0,2993,19824,25416,38726,63595,82264,82574,85417,92209,105041,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr15	99136405	99221864	chr15:99136405-99221864	0	-	99136405	99136405	8553170	8	1722,83,150,128,106,178,461,124,	0,2911,19742,25334,38644,63513,82182,85335,
#Partially deleted in new
chr15	99137552	99251223	chr15:99137552-99251223	3	-	99138009	99228712	789624	12	575,83,150,128,106,178,126,151,124,200,178,69,	0,1764,18595,24187,37497,62366,81035,81345,84188,90980,112069,113602,
#Partially deleted in new
chr15	99137575	99251223	chr15:99137575-99251223	1	-	99138009	99228712	789624	12	552,83,150,128,106,178,126,151,124,200,629,69,	0,1741,18572,24164,37474,62343,81012,81322,84165,90957,111595,113579,
#Partially deleted in new
chr15	99137639	99161747	chr15:99137639-99161747	0	-	99139204	99161747	789624	4	488,130,150,8,	0,1497,18508,24100,
#Partially deleted in new
chr15	99137852	99139742	chr15:99137852-99139742	0	-	99137852	99137852	8553170	2	275,426,	0,1464,
#Partially deleted in new
chr15	99137941	99175120	chr15:99137941-99175120	0	-	99137995	99175120	789624	6	186,260,49,150,128,71,	0,1375,1754,18206,23798,37108,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	99139316	99145370	chr15:99139316-99145370	3	+	99139316	99139316	8553170	2	1723,954,	0,5100,
#Partially deleted in new
chr15	99148511	99156279	chr15:99148511-99156279	0	-	99148511	99148511	8553170	3	198,94,132,	0,2781,7636,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	99157230	99161140	chr15:99157230-99161140	3	-	99157230	99157230	8553170	1	3910,	0,
#Partially deleted in new
chr15	99218697	99251223	chr15:99218697-99251223	0	-	99218697	99228712	789624	5	16,151,124,200,69,	0,200,3043,9835,32457,
#Partially deleted in new
chr15	99219007	99249600	chr15:99219007-99249600	0	-	99219007	99228712	789624	4	41,124,200,184,	0,2733,9525,30409,
#Partially deleted in new
chr15	99228404	99249445	chr15:99228404-99249445	0	-	99228404	99228404	8553170	2	328,29,	0,21012,
#Partially deleted in new
chr15	99228544	99249607	chr15:99228544-99249607	0	-	99228544	99228712	789624	3	188,195,191,	0,12820,20872,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	99251361	99390729	chr15:99251361-99390729	3	+	99255957	99386102	789624	10	180,228,41,38,138,207,103,176,160,4700,	0,4536,25214,35895,36452,82561,101007,109974,111744,134668,
#Partially deleted in new
chr15	99251361	99386202	chr15:99251361-99386202	1	+	99255957	99386044	789624	3	180,228,173,	0,4536,134668,
#Partially deleted in new
chr15	99251385	99334130	chr15:99251385-99334130	0	+	99251385	99251385	8553170	7	156,228,41,38,138,83,208,	0,4512,25190,35871,36428,66078,82537,
#Partially deleted in new
chr15	99251448	99256356	chr15:99251448-99256356	0	+	99251448	99251448	8553170	2	93,459,	0,4449,
#Partially deleted in new
chr15	99251459	99363178	chr15:99251459-99363178	0	+	99255957	99287274	789624	8	82,228,38,138,207,103,176,73,	0,4438,35797,36354,82463,100909,109876,111646,
#Partially deleted in new
chr15	99251462	99361511	chr15:99251462-99361511	0	+	99255957	99333937	789624	5	79,228,207,103,176,	0,4435,82460,100906,109873,
#Partially deleted in new
chr15	99251485	99333978	chr15:99251485-99333978	0	+	99255957	99285783	789624	7	56,228,41,17,38,138,56,	0,4412,25090,34282,35771,36328,82437,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	99251492	99297338	chr15:99251492-99297338	0	+	99251492	99251492	8553170	6	49,228,41,38,138,67,	0,4405,25083,35764,36321,45779,
#Partially deleted in new
chr15	99251504	99386296	chr15:99251504-99386296	1	+	99255957	99386097	789624	9	37,228,41,38,138,207,103,176,267,	0,4393,25071,35752,36309,82418,100864,109831,134525,
#Partially deleted in new
chr15	99251514	99361509	chr15:99251514-99361509	0	+	99255957	99361509	789624	5	27,228,112,103,174,	0,4383,82503,100854,109821,
#Partially deleted in new
chr15	99251519	99386035	chr15:99251519-99386035	0	+	99255940	99386035	789624	10	22,76,41,38,138,207,103,176,160,6,	0,4378,25056,35737,36294,82403,100849,109816,111586,134510,
#Partially deleted in new
chr15	99251540	99386296	chr15:99251540-99386296	1	+	99255957	99386102	789624	4	216,228,41,267,	0,4357,25035,134489,
#Partially deleted in new
chr15	99251810	99334047	chr15:99251810-99334047	0	+	99255957	99334047	789624	6	174,228,41,38,138,125,	0,4087,24765,35446,36003,82112,
#Deleted in new
chr15	99257631	99260015	chr15:99257631-99260015	7	+	99257631	99257631	16724991	1	2384,	0,
#Deleted in new
chr15	99284624	99285576	chr15:99284624-99285576	7	-	99284624	99284624	16724991	1	952,	0,
#Partially deleted in new
chr15	99286701	99352457	chr15:99286701-99352457	0	+	99286701	99286701	8553170	5	209,38,138,112,89,	0,555,1112,47316,65667,
#Partially deleted in new
chr15	99320602	99352527	chr15:99320602-99352527	0	+	99320602	99320602	8553170	3	133,207,159,	0,13320,31766,
#Partially deleted in new
chr15	99326512	99363393	chr15:99326512-99363393	0	+	99326512	99326512	8553170	6	76,128,207,103,176,288,	0,5384,7410,25856,34823,36593,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	99333614	99390727	chr15:99333614-99390727	0	+	99333614	99333614	8553170	6	515,103,176,160,1046,712,	0,18754,27721,29491,52415,56401,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	99333922	99355719	chr15:99333922-99355719	0	+	99333922	99333922	8553170	3	207,103,314,	0,18446,21483,
#Partially deleted in new
chr15	99334082	99354000	chr15:99334082-99354000	0	+	99334082	99334082	8553170	3	47,103,340,	0,18286,19578,
#Deleted in new
chr15	99337856	99338481	chr15:99337856-99338481	7	+	99337856	99337856	16724991	1	625,	0,
#Partially deleted in new
chr15	99360995	99363124	chr15:99360995-99363124	0	+	99360995	99360995	8553170	2	516,19,	0,2110,
#Partially deleted in new
chr15	99363224	99388269	chr15:99363224-99388269	0	+	99363224	99386102	789624	3	41,298,364,	0,22805,24681,
#Deleted in new
chr15	99384293	99386295	chr15:99384293-99386295	0	+	99384293	99384293	8553170	2	488,266,	0,1736,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	99395178	99396593	chr15:99395178-99396593	3	-	99395178	99395178	8553170	2	215,108,	0,1307,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	99396612	99401315	chr15:99396612-99401315	3	-	99396612	99396612	8553170	2	132,66,	0,4637,
#Deleted in new
chr15	99416583	99417204	chr15:99416583-99417204	3	+	99416583	99416583	8553170	1	621,	0,
#Partially deleted in new
chr15	99427008	99431028	chr15:99427008-99431028	3	-	99427008	99427008	8553170	2	194,201,	0,3819,
#Deleted in new
chr15	99497811	99498375	chr15:99497811-99498375	3	-	99497811	99497811	8553170	1	564,	0,
#Partially deleted in new
chr15	99551381	99552117	chr15:99551381-99552117	7	-	99551381	99551381	16724991	1	736,	0,
#Partially deleted in new
chr15	99565416	99645761	chr15:99565416-99645761	0	+	99633119	99645761	789624	4	253,82,196,201,	0,33013,67561,80144,
#Partially deleted in new
chr15	99565699	99716466	chr15:99565699-99716466	3	+	99633119	99712771	789624	11	405,82,196,204,138,220,60,188,127,127,4077,	0,32730,67278,79861,105820,108693,109699,124541,141029,144934,146690,
#Partially deleted in new
chr15	99565927	99716422	chr15:99565927-99716422	1	+	99633119	99712771	789624	10	177,196,204,132,220,60,188,127,127,4033,	0,67050,79633,105395,108465,109471,124313,140801,144706,146462,
#Partially deleted in new
chr15	99565927	99713324	chr15:99565927-99713324	1	+	99633119	99712771	789624	10	177,196,132,220,60,188,24,127,127,935,	0,67050,105395,108465,109471,124313,137434,140801,144706,146462,
#Partially deleted in new
chr15	99565927	99657531	chr15:99565927-99657531	0	+	99565927	99565927	8553170	4	177,82,196,119,	0,32502,67050,91485,
#Partially deleted in new
chr15	99565968	99645831	chr15:99565968-99645831	0	+	99565968	99565968	8553170	4	136,82,196,271,	0,32461,67009,79592,
#Partially deleted in new
chr15	99565979	99713782	chr15:99565979-99713782	1	+	99633119	99712771	789624	11	125,82,196,204,132,220,60,188,127,127,1393,	0,32450,66998,79581,105343,108413,109419,124261,140749,144654,146410,
#Partially deleted in new
chr15	99565979	99671562	chr15:99565979-99671562	0	+	99565979	99565979	8553170	5	125,82,196,204,240,	0,32450,66998,79581,105343,
#Partially deleted in new
chr15	99565989	99716406	chr15:99565989-99716406	1	+	99633119	99712771	789624	9	115,196,132,220,60,188,127,127,4017,	0,66988,105333,108403,109409,124251,140739,144644,146400,
#Partially deleted in new
chr15	99566086	99716424	chr15:99566086-99716424	1	+	99633119	99712771	789624	12	18,82,196,204,132,220,60,188,24,127,127,4035,	0,32343,66891,79474,105236,108306,109312,124154,137275,140642,144547,146303,
#Partially deleted in new
chr15	99566482	99645739	chr15:99566482-99645739	0	+	99633119	99645739	789624	4	117,82,196,179,	0,31947,66495,79078,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	99681785	99681877	chr15:99681785-99681877	3	-	99681785	99681785	8553170	1	92,	0,
#Partially deleted in new
chr15	99706594	99715962	chr15:99706594-99715962	0	+	99706594	99706594	8553170	4	261,127,446,495,	0,4039,5795,8873,
#Partially deleted in new
chr15	99715696	99733391	chr15:99715696-99733391	0	-	99715696	99715696	8553170	3	2126,183,47,	0,5087,17648,
#Partially deleted in new
chr15	99715700	99733444	chr15:99715700-99733444	0	-	99715700	99715700	8553170	2	2122,100,	0,17644,
#Partially deleted in new
chr15	99715702	99717824	chr15:99715702-99717824	1	-	99716401	99716797	789624	1	2122,	0,
#Partially deleted in new
chr15	99727400	99733444	chr15:99727400-99733444	1	-	99729122	99729635	789624	5	2331,26,290,100,100,	0,3772,4317,5528,5944,
#Partially deleted in new
chr15	99727400	99733444	chr15:99727400-99733444	1	-	99729122	99733443	789624	2	2331,100,	0,5944,
#Partially deleted in new
chr15	99727404	99733421	chr15:99727404-99733421	3	-	99729122	99731911	789624	6	2327,26,65,290,100,77,	0,3768,3953,4313,5524,5940,
#Partially deleted in new
chr15	99727404	99733339	chr15:99727404-99733339	1	-	99729122	99731999	789624	3	2327,290,55,	0,4313,5880,
#Partially deleted in new
chr15	99727408	99732009	chr15:99727408-99732009	0	-	99727408	99727408	8553170	3	2323,26,652,	0,3764,3949,
#Partially deleted in new
chr15	99729381	99733361	chr15:99729381-99733361	0	-	99729381	99729381	8553170	3	350,453,77,	0,2173,3903,
#Partially deleted in new
chr15	99729497	99733561	chr15:99729497-99733561	0	-	99729497	99729497	8553170	3	234,100,217,	0,3431,3847,
#Partially deleted in new
chr15	99729631	99733437	chr15:99729631-99733437	0	-	99729631	99731911	789624	5	100,26,50,290,93,	0,1541,1726,2086,3713,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	99790155	99806927	chr15:99790155-99806927	7	-	99790155	99790155	16724991	5	2741,623,205,130,132,	0,9476,10819,14644,16640,
#Partially deleted in new
chr15	99790783	99806909	chr15:99790783-99806909	4	-	99790783	99790783	16724991	4	2116,623,205,114,	0,8848,10191,16012,
#Partially deleted in new
chr15	99790836	99806895	chr15:99790836-99806895	4	-	99790836	99790836	16724991	4	2063,623,294,100,	0,8795,10138,15959,
#Partially deleted in new
chr15	99791126	99792847	chr15:99791126-99792847	7	+	99791126	99791126	16724991	4	89,84,529,37,	0,435,1069,1684,
#Partially deleted in new
chr15	99791208	99791410	chr15:99791208-99791410	3	+	99791208	99791208	8553170	1	202,	0,
#Partially deleted in new
chr15	99798122	99801179	chr15:99798122-99801179	5	-	99798122	99798122	16724991	3	54,623,205,	0,1509,2852,
#Partially deleted in new
chr15	99799928	99804931	chr15:99799928-99804931	4	-	99799928	99799928	16724991	3	326,138,127,	0,1113,4876,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	99807022	99877148	chr15:99807022-99877148	0	+	99807022	99807022	789624	4	76,156,114,196,	0,1124,5950,69930,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	99807058	99839065	chr15:99807058-99839065	1	+	99807058	99807058	8553170	4	40,156,114,355,	0,1088,5914,31652,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	99807987	99877105	chr15:99807987-99877105	3	+	99807987	99807987	8553170	3	315,114,153,	0,4985,68965,
#Partially deleted in new
chr15	99838629	99839219	chr15:99838629-99839219	0	+	99838629	99838629	8553170	1	590,	0,
#Partially deleted in new
chr15	99970214	99974010	chr15:99970214-99974010	3	+	99970214	99970214	8553170	3	141,46,385,	0,2473,3411,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr15	99971588	100342005	chr15:99971588-100342005	3	-	99974401	100341899	789624	22	2974,178,153,205,136,160,158,121,128,167,146,102,151,141,106,44,158,84,173,166,371,185,	0,4456,21459,25796,77268,79983,82308,124767,137400,145258,160418,161625,181023,183591,227729,282547,289890,290763,309640,359300,369450,370232,
#Partially deleted in new
chr15	99972955	99976279	chr15:99972955-99976279	0	-	99972955	99972955	8553170	3	520,990,235,	0,617,3089,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	99976480	99980774	chr15:99976480-99980774	3	+	99976480	99976480	8553170	2	128,2265,	0,2029,
#Partially deleted in new
chr15	100051567	100109107	chr15:100051567-100109107	0	-	100051567	100109107	789624	5	164,158,81,121,119,	0,2329,12111,44788,57421,
#Partially deleted in new
chr15	100063613	100339129	chr15:100063613-100339129	0	-	100063613	100063613	8553170	15	146,121,128,167,146,102,151,141,106,44,158,84,173,166,131,	0,32742,45375,53233,68393,69600,88998,91566,135704,190522,197865,198738,217615,267275,275385,
#Deleted in new
chr15	100074080	100074190	chr15:100074080-100074190	7	-	100074080	100074080	16724991	1	110,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	100126105	100129743	chr15:100126105-100129743	3	+	100126105	100126105	8553170	2	307,1474,	0,2164,
#Partially deleted in new
chr15	100168387	100261505	chr15:100168387-100261505	0	-	100168387	100168387	8553170	4	319,106,44,27,	0,30930,85748,93091,
#Partially deleted in new
chr15	100256421	100262387	chr15:100256421-100262387	0	-	100256421	100256421	8553170	3	653,158,36,	0,5057,5930,
#Partially deleted in new
chr15	100262388	100342005	chr15:100262388-100342005	0	-	100330926	100341899	789624	4	47,173,166,185,	0,18840,68500,79432,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	100305887	100341136	chr15:100305887-100341136	0	-	100306479	100341136	789624	3	690,166,98,	0,25001,35151,
#Partially deleted in new
chr15	100331013	100341182	chr15:100331013-100341182	0	-	100331013	100331013	8553170	2	41,179,	0,9990,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	100344046	100349822	chr15:100344046-100349822	3	-	100344046	100344046	8553170	2	1581,3299,	0,2477,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	100344456	100349388	chr15:100344456-100349388	0	-	100344456	100344456	8553170	2	1171,81,	0,4851,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	100344477	100349655	chr15:100344477-100349655	0	-	100344477	100344477	789624	2	1150,922,	0,4256,
#Partially deleted in new
chr15	100372938	100408787	chr15:100372938-100408787	1	+	100372938	100372938	8553170	3	54,157,221,	0,26830,35628,
#Partially deleted in new
chr15	100400394	100544720	chr15:100400394-100544720	3	-	100402712	100501849	789624	13	2471,154,107,129,93,51,58,119,115,174,90,263,70,	0,55498,68983,72529,75691,79033,79594,84155,90422,101282,121272,128418,144256,
#Partially deleted in new
chr15	100402510	100544413	chr15:100402510-100544413	1	-	100402712	100501849	789624	14	355,154,107,129,93,51,58,119,115,174,139,90,263,198,	0,53382,66867,70413,73575,76917,77478,82039,88306,99166,101199,119156,126302,141705,
#Partially deleted in new
chr15	100402510	100544271	chr15:100402510-100544271	1	-	100402712	100501849	789624	13	355,154,107,129,93,51,58,119,115,174,90,263,148,	0,53382,66867,70413,73575,76917,77478,82039,88306,99166,119156,126302,141613,
#Partially deleted in new
chr15	100402510	100544995	chr15:100402510-100544995	0	-	100402510	100402510	8553170	2	355,93,	0,142392,
#Partially deleted in new
chr15	100475836	100479496	chr15:100475836-100479496	0	-	100475836	100475836	8553170	2	342,69,	0,3591,
#Partially deleted in new
chr15	100479455	100544293	chr15:100479455-100544293	0	-	100479455	100501849	789624	8	23,58,119,115,174,90,263,78,	0,533,5094,11361,22221,42211,49357,64760,
#Partially deleted in new
chr15	100500247	100529265	chr15:100500247-100529265	0	-	100500247	100500247	8553170	4	257,174,90,453,	0,1429,21419,28565,
#Partially deleted in new
chr15	100501803	100544279	chr15:100501803-100544279	0	-	100501803	100501849	789624	4	47,139,90,156,	0,1906,19863,42320,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	100547764	100550153	chr15:100547764-100550153	3	-	100547764	100547764	8553170	1	2389,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	100551819	100551922	chr15:100551819-100551922	3	-	100551819	100551819	8553170	1	103,	0,
#Deleted in new
chr15	100553528	100558954	chr15:100553528-100558954	7	-	100553528	100553528	16724991	2	792,330,	0,5096,
#Deleted in new
chr15	100558676	100559798	chr15:100558676-100559798	3	+	100558676	100558676	8553170	2	146,486,	0,636,
#Deleted in new
chr15	100558690	100559798	chr15:100558690-100559798	1	+	100558690	100558690	789624	3	132,133,164,	0,622,944,
#Partially deleted in new
chr15	100559368	100573841	chr15:100559368-100573841	0	-	100565248	100573841	789624	4	155,94,71,191,	0,5323,5826,14282,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	100560685	100560792	chr15:100560685-100560792	3	-	100560685	100560685	8553170	1	107,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	100566913	100602240	chr15:100566913-100602240	3	-	100569237	100580842	789624	7	3204,172,591,142,90,502,120,	0,4980,6737,8073,13349,13530,35207,
#Partially deleted in new
chr15	100569234	100573562	chr15:100569234-100573562	0	-	100569234	100569234	8553170	2	883,1669,	0,2659,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	100569897	100570631	chr15:100569897-100570631	0	-	100569897	100569897	8553170	2	220,271,	0,463,
#Partially deleted in new
chr15	100572202	100602174	chr15:100572202-100602174	0	-	100572202	100572202	8553170	6	1098,591,142,90,502,54,	0,1448,2784,8060,8241,29918,
#Partially deleted in new
chr15	100573414	100602171	chr15:100573414-100602171	1	-	100573561	100580842	789624	5	827,142,90,502,51,	0,1572,6848,7029,28706,
#Partially deleted in new
chr15	100573476	100602174	chr15:100573476-100602174	1	-	100573561	100580842	789624	5	765,142,90,145,54,	0,1510,6786,7324,28644,
#Partially deleted in new
chr15	100574232	100602174	chr15:100574232-100602174	0	-	100574232	100580599	789624	5	9,142,90,293,54,	0,754,6030,6211,27888,
#Partially deleted in new
chr15	100575021	100602184	chr15:100575021-100602184	0	-	100575021	100580842	789624	5	107,90,502,109,64,	0,5241,5422,11202,27099,
#Partially deleted in new
chr15	100575043	100602157	chr15:100575043-100602157	0	-	100575043	100580842	789624	5	85,90,502,109,41,	0,5219,5400,11180,27073,
#Partially deleted in new
chr15	100580319	100596936	chr15:100580319-100596936	0	-	100580319	100580842	789624	3	33,502,27,	0,124,16590,
#Partially deleted in new
chr15	100580455	100602184	chr15:100580455-100602184	0	-	100580455	100580842	789624	2	490,68,	0,21661,
#Partially deleted in new
chr15	100580898	100603230	chr15:100580898-100603230	0	-	100580898	100580898	8553170	3	47,491,34,	0,21620,22298,
#Partially deleted in new
chr15	100602533	100651705	chr15:100602533-100651705	3	+	100612216	100648462	789624	6	513,99,122,262,606,3383,	0,681,7173,9632,26903,45789,
#Partially deleted in new
chr15	100602607	100649533	chr15:100602607-100649533	1	+	100612216	100648462	789624	5	439,99,122,262,1211,	0,607,7099,9558,45715,
#Partially deleted in new
chr15	100602608	100630209	chr15:100602608-100630209	1	+	100612216	100630050	789624	5	438,99,122,262,773,	0,606,7098,9557,26828,
#Partially deleted in new
chr15	100609546	100612512	chr15:100609546-100612512	0	+	100609546	100609546	8553170	2	282,347,	0,2619,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	100638362	100638457	chr15:100638362-100638457	3	+	100638362	100638362	8553170	1	95,	0,
#Deleted in new
chr15	100645433	100646655	chr15:100645433-100646655	7	-	100645433	100645433	16724991	1	1222,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	100716248	100828497	chr15:100716248-100828497	3	+	100716248	100716248	8553170	3	123,148,372,	0,103165,111877,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	100782416	100786189	chr15:100782416-100786189	3	-	100782416	100782416	8553170	1	3773,	0,
#Deleted in new
chr15	100783469	100785235	chr15:100783469-100785235	0	-	100783469	100783469	8553170	1	1766,	0,
#Deleted in new
chr15	100846603	100846767	chr15:100846603-100846767	7	-	100846603	100846603	16724991	1	164,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	100849560	100860037	chr15:100849560-100860037	0	+	100849560	100849560	8553170	2	350,238,	0,10239,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	100849773	100861756	chr15:100849773-100861756	0	+	100849773	100849773	8553170	4	137,122,236,21,	0,437,10026,11962,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	100849774	100860254	chr15:100849774-100860254	1	+	100849774	100849774	8553170	4	136,122,236,99,	0,436,10025,10381,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	100849782	100856240	chr15:100849782-100856240	3	+	100849782	100849782	8553170	4	128,258,118,251,	0,428,5448,6207,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	100849830	100865457	chr15:100849830-100865457	0	+	100849830	100849830	8553170	5	80,122,118,236,4512,	0,380,5400,9969,11115,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	100849830	100876836	chr15:100849830-100876836	3	+	100849830	100849830	8553170	6	80,122,118,236,82,3014,	0,380,5400,9969,17527,23992,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	100850263	100860016	chr15:100850263-100860016	0	+	100850263	100850263	8553170	4	69,144,118,217,	0,4380,4967,9536,
#Partially deleted in new
chr15	100861842	100873862	chr15:100861842-100873862	0	+	100861842	100861842	8553170	3	500,82,40,	0,5515,11980,
#Partially deleted in new
chr15	100861842	100874369	chr15:100861842-100874369	3	+	100861842	100861842	8553170	4	262,116,82,547,	0,384,5515,11980,
#Partially deleted in new
chr15	100861848	100867493	chr15:100861848-100867493	1	+	100861848	100861848	8553170	2	494,136,	0,5509,
#Partially deleted in new
chr15	100861923	100885329	chr15:100861923-100885329	3	+	100861923	100861923	8553170	3	419,82,63,	0,5434,23343,
#Partially deleted in new
chr15	100877713	100892987	chr15:100877713-100892987	0	+	100877850	100892987	789624	5	152,105,141,130,43,	0,7553,9858,14796,15231,
#Partially deleted in new
chr15	100879375	100916626	chr15:100879375-100916626	3	+	100879907	100914773	0	13	631,105,141,130,62,129,114,103,185,165,158,75,1926,	0,5891,8196,13134,13569,14578,16557,18707,21199,26147,27745,29032,35325,
#Partially deleted in new
chr15	100879812	100896014	chr15:100879812-100896014	0	+	100879907	100893972	789624	6	194,105,141,62,129,82,	0,5454,7759,13132,14141,16120,
#Deleted in new
chr15	100879838	100881508	chr15:100879838-100881508	1	+	100879907	100880216	789624	1	1670,	0,
#Partially deleted in new
chr15	100879847	100892239	chr15:100879847-100892239	0	+	100879847	100879847	8553170	4	159,105,141,171,	0,5419,7724,12221,
#Partially deleted in new
chr15	100879874	100916626	chr15:100879874-100916626	1	+	100879907	100914773	789624	10	132,105,141,114,103,185,165,158,75,1926,	0,5392,7697,16058,18208,20700,25648,27246,28533,34826,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	100888471	100889106	chr15:100888471-100889106	3	-	100888471	100888471	8553170	1	635,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	100892858	100919283	chr15:100892858-100919283	3	-	100892858	100892858	789624	2	3208,480,	0,25945,
#Partially deleted in new
chr15	100898059	100907230	chr15:100898059-100907230	0	+	100898059	100898059	8553170	4	126,185,165,110,	0,2515,7463,9061,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	100913202	100919238	chr15:100913202-100919238	1	-	100913202	100913202	789624	2	2778,435,	0,5601,
#Deleted in new
chr15	100915656	100918841	chr15:100915656-100918841	1	-	100915656	100915656	8553170	3	324,326,38,	0,2231,3147,
#Partially deleted in new
chr15	100919214	101070112	chr15:100919214-101070112	3	+	100924632	101068848	789624	34	237,219,164,172,180,149,227,128,164,138,113,77,130,113,215,165,173,121,160,277,172,164,140,250,167,198,278,195,152,118,117,854,102,1442,	0,5296,54589,64313,69419,70035,89622,91235,91459,92793,95101,96111,101838,102630,103168,105588,106750,108046,108423,109741,126766,129279,130429,132496,133707,134008,135731,137641,138775,141956,143359,146137,147425,149456,
#Partially deleted in new
chr15	100919326	100924729	chr15:100919326-100924729	0	+	100924632	100924729	789624	3	125,225,219,	0,704,5184,
#Partially deleted in new
chr15	100919336	100974148	chr15:100919336-100974148	0	+	100919336	100919336	8553170	3	115,219,345,	0,5174,54467,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	100919344	100989648	chr15:100919344-100989648	1	+	100924632	100989431	789624	6	107,219,164,172,180,399,	0,5166,54459,64183,69289,69905,
#Partially deleted in new
chr15	100924602	101069068	chr15:100924602-101069068	0	+	100924632	101024802	789624	33	127,164,172,180,149,227,128,164,138,113,77,130,113,215,168,173,121,160,277,172,164,140,250,167,198,278,195,152,118,310,854,102,398,	0,49201,58925,64031,64647,84234,85847,86071,87405,89713,90723,96450,97242,97780,100197,101362,102658,103035,104353,121378,123891,125041,127108,128319,128620,130343,132253,133387,136568,137778,140749,142037,144068,
#Partially deleted in new
chr15	100924602	101069068	chr15:100924602-101069068	0	+	100924632	101024807	789624	32	127,164,172,180,149,227,128,164,138,113,77,130,113,96,165,173,121,160,277,172,140,250,167,198,278,195,152,118,117,854,102,398,	0,49201,58925,64031,64647,84234,85847,86071,87405,89713,90723,96450,97242,97780,100200,101362,102658,103035,104353,121378,125041,127108,128319,128620,130343,132253,133387,136568,137971,140749,142037,144068,
#Partially deleted in new
chr15	101021708	101024949	chr15:101021708-101024949	0	+	101021708	101021708	8553170	3	249,215,150,	0,674,3091,
#Partially deleted in new
chr15	101022339	101026031	chr15:101022339-101026031	0	+	101022339	101022339	8553170	3	258,168,67,	0,2460,3625,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	101043715	101049456	chr15:101043715-101049456	3	-	101043715	101043715	8553170	2	423,68,	0,5673,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	101050731	101086066	chr15:101050731-101086066	3	-	101050731	101050731	8553170	3	48,304,368,	0,14629,34967,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr15	101053336	101078254	chr15:101053336-101078254	0	+	101053336	101067321	789624	10	84,278,195,152,118,117,854,102,148,9584,	0,1609,3519,4653,7834,9237,12015,13303,13903,15334,
#Partially deleted in new
chr15	101057036	101065480	chr15:101057036-101065480	0	+	101057036	101057036	8553170	5	14,152,118,117,336,	0,953,4134,5537,8108,
#Deleted in new
chr15	101064415	101070103	chr15:101064415-101070103	0	+	101064415	101064415	8553170	4	401,854,102,1433,	0,936,2224,4255,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	101116602	101117546	chr15:101116602-101117546	3	+	101116602	101116602	8553170	2	189,367,	0,577,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	101168529	101170821	chr15:101168529-101170821	0	+	101168529	101168529	8553170	2	117,272,	0,2020,
#Partially deleted in new
chr15	101169568	101170821	chr15:101169568-101170821	3	+	101169568	101169568	8553170	2	373,272,	0,981,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	101175722	101251932	chr15:101175722-101251932	3	-	101177387	101251456	789624	3	3258,496,796,	0,59359,75414,
#Partially deleted in new
chr15	101177100	101235147	chr15:101177100-101235147	0	-	101188123	101235147	789624	3	1880,227,66,	0,10892,57981,
#Partially deleted in new
chr15	101178601	101187870	chr15:101178601-101187870	0	-	101178601	101178601	8553170	2	379,185,	0,9084,
#Deleted in new
chr15	101187540	101189567	chr15:101187540-101189567	0	-	101187540	101187540	8553170	2	679,140,	0,1887,
#Partially deleted in new
chr15	101235508	101242617	chr15:101235508-101242617	0	-	101235508	101235508	8553170	2	69,70,	0,7039,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr15	101270816	101277450	chr15:101270816-101277450	3	-	101272770	101277417	0	7	829,93,76,90,107,135,109,	0,1947,3603,3775,4438,5724,6525,
#Partially deleted in new
chr15	101271416	101277314	chr15:101271416-101277314	1	-	101272770	101277287	789624	7	229,93,76,90,107,135,34,	0,1347,3003,3175,3838,5124,5864,
#Partially deleted in new
chr15	101272181	101277446	chr15:101272181-101277446	1	-	101272770	101277417	0	6	675,76,90,107,135,105,	0,2238,2410,3073,4359,5160,
#Partially deleted in new
chr15	101272189	101277471	chr15:101272189-101277471	0	-	101272189	101272189	8553170	4	667,76,770,931,	0,2230,2402,4351,
#Partially deleted in new
chr15	101272805	101277287	chr15:101272805-101277287	0	-	101272805	101277287	789624	6	51,76,90,107,135,196,	0,1614,1786,2449,3735,4286,
#Partially deleted in new
chr15	101274167	101277441	chr15:101274167-101277441	0	-	101274167	101274167	8553170	4	514,107,135,100,	0,1087,2373,3174,
#Partially deleted in new
chr15	101275099	101277500	chr15:101275099-101277500	0	-	101275099	101275099	8553170	3	262,135,159,	0,1441,2242,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	101276432	101277453	chr15:101276432-101277453	0	-	101276432	101276432	8553170	2	243,112,	0,909,
#Partially deleted in new
chr15	101281509	101295251	chr15:101281509-101295251	3	-	101281723	101295178	0	9	273,94,76,80,103,47,79,148,155,	0,3457,4216,4704,5398,6146,10452,11515,13587,
#Partially deleted in new
chr15	101281513	101295282	chr15:101281513-101295282	0	-	101281513	101281513	8553170	7	269,94,1285,47,79,148,186,	0,3453,4212,6142,10448,11511,13583,
#Partially deleted in new
chr15	101281513	101295204	chr15:101281513-101295204	0	-	101285795	101295178	789624	8	269,94,76,103,47,79,148,108,	0,3453,4212,5394,6142,10448,11511,13583,
#Partially deleted in new
chr15	101281513	101285130	chr15:101281513-101285130	0	-	101281513	101281513	8553170	2	269,164,	0,3453,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	101281514	101288448	chr15:101281514-101288448	0	-	101281514	101281514	8553170	4	268,94,1285,793,	0,3452,4211,6141,
#Partially deleted in new
chr15	101281653	101295203	chr15:101281653-101295203	0	-	101281653	101281653	789624	6	129,94,76,103,47,107,	0,3313,4072,5254,6002,13443,
#Partially deleted in new
chr15	101281708	101295255	chr15:101281708-101295255	0	-	101281708	101281708	789624	5	74,94,76,103,159,	0,3258,4017,5199,13388,
#Partially deleted in new
chr15	101281744	101294905	chr15:101281744-101294905	0	-	101281744	101286272	789624	10	38,94,76,80,103,47,79,148,101,58,	0,3222,3981,4469,5163,5911,10217,11280,11548,13103,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	101284735	101287696	chr15:101284735-101287696	0	-	101284931	101287696	789624	5	325,76,80,103,41,	0,990,1478,2172,2920,
#Partially deleted in new
chr15	101286609	101295213	chr15:101286609-101295213	0	-	101286609	101286609	8553170	3	401,47,117,	0,1046,8487,
#Partially deleted in new
chr15	101286689	101294930	chr15:101286689-101294930	0	-	101286689	101286689	8553170	5	321,47,79,148,83,	0,966,5272,6335,8158,
#Partially deleted in new
chr15	101286847	101295255	chr15:101286847-101295255	1	-	101286847	101295178	789624	6	3,103,47,79,148,159,	0,60,808,5114,6177,8249,
#Partially deleted in new
chr15	101286920	101294961	chr15:101286920-101294961	0	-	101286920	101286920	8553170	5	90,47,79,148,114,	0,735,5041,6104,7927,
#Partially deleted in new
chr15	101288081	101295211	chr15:101288081-101295211	0	-	101288081	101288081	8553170	4	124,79,148,115,	0,3880,4943,7015,
#Partially deleted in new
chr15	101292838	101295271	chr15:101292838-101295271	0	-	101292838	101292838	8553170	2	334,175,	0,2258,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	101295418	101305737	chr15:101295418-101305737	3	+	101295418	101295418	8553170	2	311,2279,	0,8040,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	101297141	101313402	chr15:101297141-101313402	0	-	101300777	101313402	789624	3	3728,113,27,	0,10071,16234,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	101299655	101301648	chr15:101299655-101301648	3	-	101299655	101299655	8553170	1	1993,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	101300612	101366262	chr15:101300612-101366262	0	-	101300777	101366262	789624	4	257,39,180,67,	0,31038,31239,65583,
#Partially deleted in new
chr15	101303927	101489839	chr15:101303927-101489839	3	-	101305257	101489670	789624	22	1428,113,130,104,88,197,103,39,180,137,189,118,104,101,213,173,89,77,144,111,105,466,	0,3285,9448,14391,18592,20922,22449,27723,27924,62268,66407,78164,80394,85536,89284,94476,123964,126059,127392,128062,139628,185446,
#Partially deleted in new
chr15	101303928	101443663	chr15:101303928-101443663	0	-	101305257	101443663	789624	19	1427,113,130,104,88,197,103,39,180,137,189,101,213,173,89,77,144,111,108,	0,3284,9447,14390,18591,20921,22448,27722,27923,62267,66406,85535,89283,94475,123963,126058,127391,128061,139627,
#Partially deleted in new
chr15	101303930	101309112	chr15:101303930-101309112	0	-	101303930	101303930	8553170	2	1425,1900,	0,3282,
#Partially deleted in new
chr15	101303933	101489744	chr15:101303933-101489744	1	-	101305257	101489670	789624	21	1422,113,130,104,88,197,103,180,137,189,118,104,101,213,173,89,77,144,111,105,371,	0,3279,9442,14385,18586,20916,22443,27918,62262,66401,78158,80388,85530,89278,94470,123958,126053,127386,128056,139622,185440,
#Partially deleted in new
chr15	101304745	101525202	chr15:101304745-101525202	0	-	101304745	101304745	8553170	5	610,113,220,130,123,	0,2467,7433,8630,220334,
#Partially deleted in new
chr15	101305124	101334254	chr15:101305124-101334254	1	-	101305257	101331945	789624	9	231,113,130,104,88,197,103,180,64,	0,2088,8251,13194,17395,19725,21252,26727,29066,
#Partially deleted in new
chr15	101305127	101316389	chr15:101305127-101316389	0	-	101305127	101305127	8553170	4	228,113,130,72,	0,2085,8248,11190,
#Partially deleted in new
chr15	101305230	101308940	chr15:101305230-101308940	0	-	101305230	101305230	8553170	3	125,113,100,	0,1982,3610,
#Partially deleted in new
chr15	101307290	101313847	chr15:101307290-101313847	0	-	101307290	101307290	8553170	2	35,472,	0,6085,
#Partially deleted in new
chr15	101313016	101489744	chr15:101313016-101489744	1	-	101313146	101489670	789624	19	489,104,88,197,103,180,137,189,118,104,101,213,173,89,77,144,111,105,371,	0,5302,9503,11833,13360,18835,53179,57318,69075,71305,76447,80195,85387,114875,116970,118303,118973,130539,176357,
#Partially deleted in new
chr15	101313016	101489744	chr15:101313016-101489744	1	-	101313146	101489670	789624	20	489,104,88,197,103,39,180,137,189,118,104,101,213,173,89,77,144,111,105,371,	0,5302,9503,11833,13360,18634,18835,53179,57318,69075,71305,76447,80195,85387,114875,116970,118303,118973,130539,176357,
#Partially deleted in new
chr15	101324938	101370468	chr15:101324938-101370468	0	-	101324938	101370468	789624	4	108,103,34,134,	0,1438,6913,45396,
#Partially deleted in new
chr15	101326380	101382124	chr15:101326380-101382124	0	-	101326380	101326380	8553170	4	99,180,189,33,	0,5471,43954,55711,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	101334436	101337428	chr15:101334436-101337428	3	+	101334436	101334436	789624	3	77,160,402,	0,2341,2590,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr15	101346372	101489697	chr15:101346372-101489697	1	-	101347722	101489670	789624	15	1405,46,137,189,118,104,101,213,173,89,77,144,111,105,324,	0,18626,19823,23962,35719,37949,43091,46839,52031,81519,83614,84947,85617,97183,143001,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr15	101346741	101489697	chr15:101346741-101489697	1	-	101347763	101489670	789624	14	1036,137,189,118,104,101,213,173,89,77,144,111,105,324,	0,19454,23593,35350,37580,42722,46470,51662,81150,83245,84578,85248,96814,142632,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	101364873	101370488	chr15:101364873-101370488	0	-	101364907	101370488	789624	3	171,137,154,	0,1322,5461,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr15	101364907	101489984	chr15:101364907-101489984	1	-	101364907	101489670	789624	14	137,137,189,118,104,101,213,173,89,77,144,111,105,611,	0,1288,5427,17184,19414,24556,28304,33496,62984,65079,66412,67082,78648,124466,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	101365784	101382206	chr15:101365784-101382206	0	-	101365784	101365784	8553170	3	548,189,115,	0,4550,16307,
#Partially deleted in new
chr15	101384321	101489435	chr15:101384321-101489435	0	-	101384321	101489435	789624	9	104,101,213,173,89,77,111,105,62,	0,5142,8890,14082,43570,45665,47668,59234,105052,
#Deleted in new
chr15	101495051	101495567	chr15:101495051-101495567	3	-	101495051	101495051	8553170	1	516,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	101522596	101524739	chr15:101522596-101524739	3	-	101522596	101522596	8553170	1	2143,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	101527580	101528349	chr15:101527580-101528349	3	-	101527580	101527580	8553170	2	280,33,	0,736,
#Deleted in new
chr15	101562535	101562974	chr15:101562535-101562974	7	+	101562535	101562535	16724991	1	439,	0,
#Deleted in new
chr15	101580892	101581556	chr15:101580892-101581556	7	-	101580892	101580892	16724991	1	664,	0,
#Deleted in new
chr15	101613675	101614339	chr15:101613675-101614339	3	-	101613675	101613675	8553170	2	99,390,	0,274,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	101621443	101624977	chr15:101621443-101624977	0	-	101621443	101621443	8553170	1	3534,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	101621643	101633697	chr15:101621643-101633697	0	-	101621643	101621643	8553170	4	112,116,84,555,	0,4804,11299,11499,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	101632976	101652376	chr15:101632976-101652376	1	-	101633676	101652361	789624	5	752,76,175,158,106,	0,12110,13748,17027,19294,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr15	101632976	101652384	chr15:101632976-101652384	1	-	101633676	101652361	789624	6	752,76,175,158,78,114,	0,12110,13748,17027,18719,19294,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	101633256	101636358	chr15:101633256-101636358	0	-	101633256	101633256	8553170	1	3102,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	101636479	101650161	chr15:101636479-101650161	0	-	101636858	101650161	789624	4	455,76,175,158,	0,8607,10245,13524,
#Partially deleted in new
chr15	101641845	101652391	chr15:101641845-101652391	3	-	101642478	101652361	789624	5	799,76,175,158,121,	0,3241,4879,8158,10425,
#Partially deleted in new
chr15	101641847	101652367	chr15:101641847-101652367	1	-	101642478	101652361	789624	6	797,76,175,158,78,97,	0,3239,4877,8156,9848,10423,
#Partially deleted in new
chr15	101641847	101646422	chr15:101641847-101646422	0	-	101641847	101641847	8553170	2	797,1336,	0,3239,
#Partially deleted in new
chr15	101641850	101650692	chr15:101641850-101650692	1	-	101642478	101650135	789624	4	794,76,175,689,	0,3236,4874,8153,
#Partially deleted in new
chr15	101641881	101652391	chr15:101641881-101652391	0	-	101652232	101652361	789624	5	763,76,175,158,696,	0,3205,4843,8122,9814,
#Partially deleted in new
chr15	101645087	101652297	chr15:101645087-101652297	0	-	101652232	101652297	789624	4	75,175,158,470,	0,1637,4916,6740,
#Partially deleted in new
chr15	101646384	101652382	chr15:101646384-101652382	0	-	101646384	101646384	8553170	4	515,158,78,112,	0,3619,5311,5886,
#Partially deleted in new
chr15	101646614	101652381	chr15:101646614-101652381	0	-	101646614	101646614	8553170	3	285,158,111,	0,3389,5656,
#Deleted in new
chr15	101648205	101648312	chr15:101648205-101648312	3	-	101648205	101648205	8553170	1	107,	0,
#Deleted in new
chr15	101650069	101651998	chr15:101650069-101651998	0	-	101650069	101650069	8553170	3	92,184,303,	0,1138,1626,
#Deleted in new
chr15	101651015	101652381	chr15:101651015-101652381	0	-	101651015	101651015	8553170	3	376,78,111,	0,680,1255,
#Partially deleted in new
chr15	101653597	101724604	chr15:101653597-101724604	3	-	101654581	101724387	789624	19	1133,115,73,105,101,78,138,163,167,99,147,79,65,118,122,124,197,72,514,	0,3324,4187,8114,17888,18073,22002,30477,32298,47488,48641,50261,52085,55195,58282,61242,67528,69495,70493,
#Partially deleted in new
chr15	101654212	101708828	chr15:101654212-101708828	0	-	101699414	101708828	789624	14	518,115,105,101,78,138,163,167,105,99,147,79,65,36,	0,2709,7499,17273,17458,21387,29862,31683,45118,46873,48026,49646,51470,54580,
#Partially deleted in new
chr15	101654393	101724410	chr15:101654393-101724410	0	-	101655979	101724387	789624	20	337,154,115,73,105,101,78,138,163,167,99,147,79,65,118,122,124,197,72,320,	0,1473,2528,3391,7318,17092,17277,21206,29681,31502,46692,47845,49465,51289,54399,57486,60446,66732,68699,69697,
#Partially deleted in new
chr15	101654468	101664442	chr15:101654468-101664442	0	-	101654468	101654468	8553170	4	262,115,105,273,	0,2453,7243,9701,
#Partially deleted in new
chr15	101655979	101724442	chr15:101655979-101724442	1	-	101655979	101724387	789624	19	41,115,73,105,101,78,138,163,167,99,147,79,65,118,122,124,197,72,352,	0,942,1805,5732,15506,15691,19620,28095,29916,45106,46259,47879,49703,52813,55900,58860,65146,67113,68111,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	101695759	101701165	chr15:101695759-101701165	0	-	101695759	101695759	8553170	2	280,80,	0,5326,
#Partially deleted in new
chr15	101714677	101721174	chr15:101714677-101721174	0	-	101714677	101714677	8553170	2	286,49,	0,6448,
#Partially deleted in new
chr15	101732200	101745983	chr15:101732200-101745983	7	-	101732200	101732200	16724991	4	72,114,22,63,	0,5067,13689,13720,
#Partially deleted in new
chr15	101737098	101745710	chr15:101737098-101745710	4	-	101737098	101737098	16724991	3	271,156,76,	0,7342,8536,
#Partially deleted in new
chr15	101737098	101746870	chr15:101737098-101746870	5	-	101737098	101737098	16724991	3	271,156,90,	0,7342,9682,
#Partially deleted in new
chr15	101737108	101744804	chr15:101737108-101744804	4	-	101737108	101737108	16724991	2	261,364,	0,7332,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr15	101751031	101773472	chr15:101751031-101773472	7	+	101751031	101751031	16724991	4	714,12466,170,1693,	0,1434,18050,20748,
#Partially deleted in new
chr15	101751552	101764961	chr15:101751552-101764961	5	+	101751552	101751552	16724991	2	171,12496,	0,913,
#Partially deleted in new
chr15	101771757	101781989	chr15:101771757-101781989	7	-	101771757	101771757	16724991	15	351,101,127,124,240,85,116,87,110,85,48,39,117,120,48,	0,441,624,3133,3519,4136,4415,4637,5754,5959,6132,6445,7337,8239,10184,
#Partially deleted in new
chr15	101772806	101794302	chr15:101772806-101794302	5	+	101772806	101772806	16724991	3	126,140,68,	0,14255,21428,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	101773237	101773513	chr15:101773237-101773513	3	-	101773237	101773237	8553170	1	276,	0,
#Deleted in new
chr15	101803508	101806887	chr15:101803508-101806887	3	+	101805719	101806658	789624	2	37,1201,	0,2178,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	101812201	101820197	chr15:101812201-101820197	3	+	101818186	101819125	789624	2	71,2048,	0,5948,
#Deleted in new
chr15	101828740	101829679	chr15:101828740-101829679	7	+	101828740	101828740	16724991	1	939,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr15	101842118	101850324	chr15:101842118-101850324	7	+	101842118	101842118	16724991	5	30,83,98,139,1704,	0,803,1357,6270,6502,
#Partially deleted in new
chr15	101848644	101849575	chr15:101848644-101849575	5	+	101848644	101848644	16724991	1	931,	0,
#Partially deleted in new
chr15	101875963	101876901	chr15:101875963-101876901	7	+	101875963	101875963	16724991	1	938,	0,
#Partially deleted in new
chr15	101887353	101887767	chr15:101887353-101887767	7	-	101887353	101887353	16724991	1	414,	0,
#Partially deleted in new
chr15	101903153	101903204	chr15:101903153-101903204	7	+	101903153	101903153	16724991	1	51,	0,
#Deleted in new
chr15	101922041	101923095	chr15:101922041-101923095	3	-	101922141	101923059	789624	1	1054,	0,
#Deleted in new
chr15	101922041	101923113	chr15:101922041-101923113	0	-	101922141	101923113	8553170	1	1072,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	101926163	101933350	chr15:101926163-101933350	7	-	101926163	101926163	16724991	3	1577,157,25,	0,5959,7162,
#Deleted in new
chr15	101926804	101927707	chr15:101926804-101927707	5	-	101926804	101926804	16724991	1	903,	0,
#Deleted in new
chr15	101937590	101938470	chr15:101937590-101938470	7	-	101937590	101937590	16724991	1	880,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	101954884	101956412	chr15:101954884-101956412	3	+	101954884	101954884	789624	3	361,205,621,	0,600,907,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	101954892	101955721	chr15:101954892-101955721	0	+	101954892	101954892	8553170	2	353,237,	0,592,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr15	101959847	101960582	chr15:101959847-101960582	0	-	101959847	101959847	8553170	2	135,288,	0,447,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr15	101959860	101961408	chr15:101959860-101961408	3	-	101959860	101959860	8553170	3	122,104,486,	0,434,1062,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr15	101960458	101960596	chr15:101960458-101960596	3	-	101960458	101960458	5263520	1	138,	0,
#Partially deleted in new
chr15	101961602	101966755	chr15:101961602-101966755	5	+	101961602	101961602	16724991	3	39,154,234,	0,4467,4919,
#Partially deleted in new
chr15	101961603	101973225	chr15:101961603-101973225	4	+	101961603	101961603	16724991	5	38,271,99,147,6,	0,4349,10992,11297,11616,
#Partially deleted in new
chr15	101961617	101973939	chr15:101961617-101973939	4	+	101961617	101961617	16724991	8	24,154,227,99,147,133,136,35,	0,4452,10205,10978,11283,11602,11974,12287,
#Partially deleted in new
chr15	101961617	101973286	chr15:101961617-101973286	4	+	101961617	101961617	16724991	7	24,154,227,58,95,147,67,	0,4452,10205,10790,10982,11283,11602,
#Partially deleted in new
chr15	101966051	101976528	chr15:101966051-101976528	4	+	101966051	101966051	16724991	10	172,112,147,133,136,202,159,153,69,396,	0,6531,6849,7168,7540,7853,8143,8961,9872,10081,
#Partially deleted in new
chr15	101966066	101976543	chr15:101966066-101976543	7	+	101966066	101966066	16724991	10	157,99,147,133,136,180,159,153,69,411,	0,6529,6834,7153,7525,7838,8128,8946,9857,10066,
#Partially deleted in new
chr15	101966074	101976266	chr15:101966074-101976266	5	+	101966074	101966074	16724991	10	149,112,147,133,136,202,159,153,69,134,	0,6508,6826,7145,7517,7830,8120,8938,9849,10058,
#Deleted in new
chr15	101973523	101973591	chr15:101973523-101973591	3	+	101973523	101973523	5263520	1	68,	0,
#Deleted in new
chr15	101976557	101979093	chr15:101976557-101979093	5	-	101976557	101976557	16724991	3	1007,127,354,	0,1688,2182,
#Deleted in new
chr15	101976557	101979093	chr15:101976557-101979093	7	-	101976557	101976557	16724991	3	1189,109,354,	0,1688,2182,
#Deleted in new
chr15	101977293	101978791	chr15:101977293-101978791	5	-	101977293	101977293	16724991	5	212,154,70,85,52,	0,299,629,976,1446,
#Deleted in new
chr15_GL383554v1_alt	3652	3730	chr15_GL383554v1_alt:3652-3730	3	+	3652	3730	789624	1	78,	0,
#Deleted in new
chr15_GL383554v1_alt	8081	10079	chr15_GL383554v1_alt:8081-10079	0	-	8081	8081	8553170	3	343,103,45,	0,1240,1953,
#Deleted in new
chr15_GL383554v1_alt	9321	10112	chr15_GL383554v1_alt:9321-10112	3	-	9321	9393	789624	2	103,78,	0,713,
#Deleted in new
chr15_GL383554v1_alt	9321	10109	chr15_GL383554v1_alt:9321-10109	0	-	9321	9393	789624	2	103,75,	0,713,
#Deleted in new
chr15_GL383554v1_alt	20189	24559	chr15_GL383554v1_alt:20189-24559	7	+	20189	20189	16724991	4	201,227,125,173,	0,2387,2706,4197,
#Deleted in new
chr15_GL383554v1_alt	34436	34603	chr15_GL383554v1_alt:34436-34603	7	+	34436	34436	16724991	1	167,	0,
#Deleted in new
chr15_GL383554v1_alt	37009	45974	chr15_GL383554v1_alt:37009-45974	7	-	37009	37009	16724991	9	544,1761,142,59,107,94,51,129,144,	0,1200,3617,4089,5525,5727,5909,7046,8821,
#Deleted in new
chr15_GL383554v1_alt	49781	53644	chr15_GL383554v1_alt:49781-53644	7	-	49781	49781	16724991	4	67,131,380,89,	0,929,1731,3774,
#Deleted in new
chr15_GL383554v1_alt	66546	70468	chr15_GL383554v1_alt:66546-70468	0	+	66546	66546	8553170	5	60,120,60,81,153,	0,1886,2591,2834,3769,
#Deleted in new
chr15_GL383554v1_alt	66589	79950	chr15_GL383554v1_alt:66589-79950	0	+	66589	66589	8553170	18	146,120,60,81,360,85,110,90,108,88,257,81,76,92,101,101,153,3147,	0,1843,2548,2791,3726,4174,4354,5483,5679,5982,6460,6984,8424,8937,9603,9786,9976,10214,
#Deleted in new
chr15_GL383554v1_alt	66589	76988	chr15_GL383554v1_alt:66589-76988	1	+	66651	76988	789624	19	146,120,60,81,39,48,85,110,90,108,88,257,69,76,92,101,101,153,185,	0,1843,2548,2791,3726,4038,4174,4354,5483,5679,5982,6460,6984,8424,8937,9603,9786,9976,10214,
#Deleted in new
chr15_GL383554v1_alt	66589	79943	chr15_GL383554v1_alt:66589-79943	3	+	72099	76988	789624	18	146,120,60,81,360,85,110,90,108,88,257,69,76,92,101,101,153,3140,	0,1843,2548,2791,3726,4174,4354,5483,5679,5982,6460,6984,8424,8937,9603,9786,9976,10214,
#Deleted in new
chr15_GL383554v1_alt	66589	69379	chr15_GL383554v1_alt:66589-69379	0	+	66589	66589	8553170	3	146,120,242,	0,1843,2548,
#Deleted in new
chr15_GL383554v1_alt	67336	70432	chr15_GL383554v1_alt:67336-70432	0	+	67336	67336	8553170	5	194,120,60,81,117,	0,1096,1801,2044,2979,
#Deleted in new
chr15_GL383554v1_alt	75119	75377	chr15_GL383554v1_alt:75119-75377	3	+	75119	75119	8553170	1	258,	0,
#Deleted in new
chr15_GL383554v1_alt	90725	92883	chr15_GL383554v1_alt:90725-92883	7	+	90725	90725	16724991	1	2158,	0,
#Deleted in new
chr15_GL383554v1_alt	104301	104527	chr15_GL383554v1_alt:104301-104527	7	+	104301	104301	16724991	1	226,	0,
#Deleted in new
chr15_GL383554v1_alt	110019	110224	chr15_GL383554v1_alt:110019-110224	7	+	110019	110019	16724991	1	205,	0,
#Deleted in new
chr15_GL383554v1_alt	115719	115924	chr15_GL383554v1_alt:115719-115924	7	+	115719	115719	16724991	1	205,	0,
#Deleted in new
chr15_GL383554v1_alt	143714	143838	chr15_GL383554v1_alt:143714-143838	7	+	143714	143714	16724991	1	124,	0,
#Deleted in new
chr15_GL383554v1_alt	154422	157362	chr15_GL383554v1_alt:154422-157362	7	-	154422	154422	16724991	3	226,179,171,	0,337,2769,
#Deleted in new
chr15_GL383554v1_alt	172905	173026	chr15_GL383554v1_alt:172905-173026	7	-	172905	172905	16724991	1	121,	0,
#Deleted in new
chr15_GL383554v1_alt	194555	194757	chr15_GL383554v1_alt:194555-194757	7	-	194555	194555	16724991	1	202,	0,
#Deleted in new
chr15_GL383554v1_alt	206203	208386	chr15_GL383554v1_alt:206203-208386	7	-	206203	206203	16724991	1	2183,	0,
#Deleted in new
chr15_GL383554v1_alt	219190	232551	chr15_GL383554v1_alt:219190-232551	0	-	219190	219190	789624	18	3147,153,101,101,92,76,81,257,88,108,90,110,85,360,81,60,120,146,	0,3232,3474,3657,4332,4861,6296,6644,7291,7574,7788,8897,9102,9275,10489,10753,11398,13215,
#Deleted in new
chr15_GL383554v1_alt	219194	232551	chr15_GL383554v1_alt:219194-232551	0	-	219194	219194	8553170	18	3143,153,101,101,92,76,69,257,88,108,90,110,85,360,81,60,120,146,	0,3228,3470,3653,4328,4857,6304,6640,7287,7570,7784,8893,9098,9271,10485,10749,11394,13211,
#Deleted in new
chr15_GL383554v1_alt	219194	232550	chr15_GL383554v1_alt:219194-232550	0	-	219194	219194	8553170	17	3143,153,101,101,92,76,69,257,88,108,90,110,85,1295,60,120,145,	0,3228,3470,3653,4328,4857,6304,6640,7287,7570,7784,8893,9098,9271,10749,11394,13211,
#Deleted in new
chr15_GL383554v1_alt	220342	229992	chr15_GL383554v1_alt:220342-229992	0	-	220342	220342	8553170	15	1995,153,101,101,76,69,257,88,108,90,110,85,360,81,49,	0,2080,2322,2505,3709,5156,5492,6139,6422,6636,7745,7950,8123,9337,9601,
#Deleted in new
chr15_GL383554v1_alt	222152	232489	chr15_GL383554v1_alt:222152-232489	3	-	222152	232489	789624	19	185,153,101,101,92,76,69,257,88,108,90,110,85,48,39,81,60,120,84,	0,270,512,695,1370,1899,3346,3682,4329,4612,4826,5935,6140,6313,6634,7527,7791,8436,10253,
#Deleted in new
chr15_GL383554v1_alt	223730	224020	chr15_GL383554v1_alt:223730-224020	3	-	223730	223730	8553170	1	290,	0,
#Deleted in new
chr15_GL383554v1_alt	228597	231483	chr15_GL383554v1_alt:228597-231483	0	-	228597	228597	8553170	5	228,81,60,120,58,	0,1082,1346,1991,2828,
#Deleted in new
chr15_GL383554v1_alt	228731	231811	chr15_GL383554v1_alt:228731-231811	0	-	228731	228731	8553170	5	94,81,60,120,201,	0,948,1212,1857,2879,
#Deleted in new
chr15_GL383554v1_alt	228769	231782	chr15_GL383554v1_alt:228769-231782	0	-	228769	228769	8553170	5	56,81,60,120,220,	0,910,1174,1819,2793,
#Deleted in new
chr15_GL383554v1_alt	245491	249357	chr15_GL383554v1_alt:245491-249357	7	+	245491	245491	16724991	4	92,313,141,76,	0,1760,2792,3790,
#Deleted in new
chr15_GL383554v1_alt	253217	260959	chr15_GL383554v1_alt:253217-260959	7	+	253217	253217	16724991	8	129,129,51,94,107,59,142,1761,	0,1775,2989,3128,3317,4794,5183,5981,
#Deleted in new
chr15_GL383554v1_alt	264567	264805	chr15_GL383554v1_alt:264567-264805	7	-	264567	264567	16724991	1	238,	0,
#Deleted in new
chr15_GL383554v1_alt	274598	278980	chr15_GL383554v1_alt:274598-278980	7	-	274598	274598	16724991	4	170,125,227,203,	0,1549,1766,4179,
#Deleted in new
chr15_GL383554v1_alt	289071	290703	chr15_GL383554v1_alt:289071-290703	5	+	289071	289071	16724991	2	57,966,	0,666,
#Deleted in new
chr15_GL383554v1_alt	289768	289840	chr15_GL383554v1_alt:289768-289840	7	+	289768	289768	16724991	1	72,	0,
#Deleted in new
chr15_GL383555v2_alt	847	4018	chr15_GL383555v2_alt:847-4018	0	-	847	847	8553170	3	106,67,119,	0,710,3052,
#Deleted in new
chr15_GL383555v2_alt	851	1589	chr15_GL383555v2_alt:851-1589	0	-	851	851	8553170	2	88,32,	0,706,
#Deleted in new
chr15_GL383555v2_alt	851	62507	chr15_GL383555v2_alt:851-62507	0	-	7362	62507	789624	15	102,67,237,129,129,359,129,135,147,103,164,121,175,213,137,	0,706,4703,6436,7114,7564,8932,13304,13789,19391,20686,21789,48513,55874,61519,
#Deleted in new
chr15_GL383555v2_alt	851	5936	chr15_GL383555v2_alt:851-5936	0	-	851	851	8553170	4	88,67,71,382,	0,706,882,4703,
#Deleted in new
chr15_GL383555v2_alt	851	4296	chr15_GL383555v2_alt:851-4296	0	-	851	851	8553170	4	102,67,119,42,	0,706,3048,3403,
#Deleted in new
chr15_GL383555v2_alt	5343	7416	chr15_GL383555v2_alt:5343-7416	0	-	5343	5343	8553170	2	448,129,	0,1944,
#Deleted in new
chr15_GL383555v2_alt	5554	357702	chr15_GL383555v2_alt:5554-357702	3	-	5554	232358	789624	20	237,129,129,129,129,135,147,103,164,121,175,213,137,121,247,93,101,102,128,143,	0,1733,2411,3091,4229,8601,9086,14688,15983,17086,43810,51171,56816,67041,68505,180655,217486,222299,226706,352005,
#Deleted in new
chr15_GL383555v2_alt	5554	357692	chr15_GL383555v2_alt:5554-357692	0	-	5554	227929	789624	18	237,129,129,129,129,135,147,103,164,121,175,213,137,121,247,93,102,133,	0,1733,2411,3091,4229,8601,9086,14688,15983,17086,43810,51171,56816,67041,68505,180655,222299,352005,
#Deleted in new
chr15_GL383555v2_alt	13509	14193	chr15_GL383555v2_alt:13509-14193	0	-	13872	14193	789624	2	416,38,	0,646,
#Deleted in new
chr15_GL383555v2_alt	21538	63038	chr15_GL383555v2_alt:21538-63038	0	-	21538	21538	8553170	6	163,121,175,213,137,55,	0,1102,27826,35187,40832,41445,
#Deleted in new
chr15_GL383555v2_alt	56769	63048	chr15_GL383555v2_alt:56769-63048	0	-	56769	56769	8553170	3	169,137,27,	0,5601,6252,
#Deleted in new
chr15_GL383555v2_alt	56864	63056	chr15_GL383555v2_alt:56864-63056	0	-	56864	56864	8553170	2	74,686,	0,5506,
#Deleted in new
chr15_GL383555v2_alt	56992	63082	chr15_GL383555v2_alt:56992-63082	0	-	56992	56992	8553170	4	209,65,137,61,	0,1897,5378,6029,
#Deleted in new
chr15_GL383555v2_alt	362453	365758	chr15_GL383555v2_alt:362453-365758	3	+	362453	362453	8553170	2	133,650,	0,2655,
#Deleted in new
chr15_GL383555v2_alt	382452	382998	chr15_GL383555v2_alt:382452-382998	3	-	382452	382452	8553170	1	546,	0,
#Deleted in new
chr15_KI270727v1_random	20740	22392	chr15_KI270727v1_random:20740-22392	7	-	20740	20740	16724991	2	887,764,	0,888,
#Deleted in new
chr15_KI270727v1_random	34889	34996	chr15_KI270727v1_random:34889-34996	3	+	34889	34889	8553170	1	107,	0,
#Deleted in new
chr15_KI270727v1_random	100122	101141	chr15_KI270727v1_random:100122-101141	3	-	100122	101141	8553170	3	135,50,415,	0,138,604,
#Deleted in new
chr15_KI270727v1_random	136159	167567	chr15_KI270727v1_random:136159-167567	3	-	136178	167200	8553170	11	232,124,167,45,71,71,138,107,174,115,888,	0,1916,10510,11722,13170,18735,21314,22789,25704,26037,30520,
#Deleted in new
chr15_KI270727v1_random	152229	167571	chr15_KI270727v1_random:152229-167571	1	-	153438	167200	8553170	8	270,221,71,138,107,174,115,892,	0,1008,2665,5244,6719,9634,9967,14450,
#Deleted in new
chr15_KI270727v1_random	156088	156195	chr15_KI270727v1_random:156088-156195	3	-	156088	156088	8553170	1	107,	0,
#Deleted in new
chr15_KI270727v1_random	372321	373405	chr15_KI270727v1_random:372321-373405	3	+	372419	373361	8553170	1	1084,	0,
#Deleted in new
chr15_KI270727v1_random	386277	387620	chr15_KI270727v1_random:386277-387620	3	+	386277	387228	8553170	1	1343,	0,
#Deleted in new
chr15_KI270727v1_random	417282	418206	chr15_KI270727v1_random:417282-418206	7	+	417282	417282	16724991	2	69,852,	0,72,
#Deleted in new
chr15_KI270848v1_alt	745	77330	chr15_KI270848v1_alt:745-77330	0	-	745	44313	789624	22	200,120,109,77,97,157,154,148,167,126,123,118,92,105,129,97,182,102,78,90,123,49,	0,5487,6813,7030,8472,11020,12771,14081,14985,22274,24199,28506,30084,33389,35475,35694,39459,40841,41145,43285,43451,76536,
#Deleted in new
chr15_KI270848v1_alt	745	14353	chr15_KI270848v1_alt:745-14353	0	-	745	745	8553170	7	200,120,109,77,97,157,837,	0,5487,6813,7030,8472,11020,12771,
#Deleted in new
chr15_KI270848v1_alt	745	2480	chr15_KI270848v1_alt:745-2480	0	-	745	745	8553170	1	1735,	0,
#Deleted in new
chr15_KI270848v1_alt	745	77347	chr15_KI270848v1_alt:745-77347	3	-	745	44313	789624	23	200,120,109,77,97,157,154,148,167,126,123,118,92,105,129,97,182,102,78,90,123,119,66,	0,5487,6813,7030,8472,11020,12771,14081,14985,22274,24199,28506,30084,33389,35475,35694,39459,40841,41145,43285,43451,44193,76536,
#Deleted in new
chr15_KI270848v1_alt	797	12143	chr15_KI270848v1_alt:797-12143	0	-	797	797	8553170	6	148,120,109,77,97,378,	0,5435,6761,6978,8420,10968,
#Deleted in new
chr15_KI270848v1_alt	6232	9425	chr15_KI270848v1_alt:6232-9425	0	-	6232	6232	8553170	4	120,109,77,208,	0,1326,1543,2985,
#Deleted in new
chr15_KI270848v1_alt	11866	23053	chr15_KI270848v1_alt:11866-23053	0	-	11866	23053	789624	5	56,148,148,167,34,	0,2055,2960,3864,11153,
#Deleted in new
chr15_KI270848v1_alt	13522	14948	chr15_KI270848v1_alt:13522-14948	0	-	14811	14948	789624	3	148,148,286,	0,399,1140,
#Deleted in new
chr15_KI270848v1_alt	40260	44015	chr15_KI270848v1_alt:40260-44015	0	-	40260	40260	8553170	4	126,102,78,279,	0,1326,1630,3476,
#Deleted in new
chr15_KI270848v1_alt	40290	78058	chr15_KI270848v1_alt:40290-78058	0	-	40290	44313	789624	6	96,102,78,90,123,55,	0,1296,1600,3740,3906,37713,
#Deleted in new
chr15_KI270848v1_alt	40320	77377	chr15_KI270848v1_alt:40320-77377	0	-	40320	44313	789624	6	66,102,78,90,150,96,	0,1266,1570,3710,3876,36961,
#Deleted in new
chr15_KI270848v1_alt	41625	77343	chr15_KI270848v1_alt:41625-77343	0	-	43841	44313	789624	6	63,78,132,90,150,62,	0,265,2111,2405,2571,35656,
#Deleted in new
chr15_KI270848v1_alt	80185	136590	chr15_KI270848v1_alt:80185-136590	0	-	93907	136564	789624	24	420,114,101,89,126,179,121,85,183,189,199,269,116,203,247,94,90,115,136,80,97,109,54,172,	0,13661,17385,19885,20917,22247,22870,23086,25515,26765,27953,34604,36050,38790,40777,41567,42946,44022,47717,48782,49560,53734,53936,56233,
#Deleted in new
chr15_KI270848v1_alt	88680	102488	chr15_KI270848v1_alt:88680-102488	0	-	89312	102488	789624	5	706,101,89,126,56,	0,8890,11390,12422,13752,
#Deleted in new
chr15_KI270848v1_alt	96178	136694	chr15_KI270848v1_alt:96178-136694	3	-	96821	136564	789624	23	690,101,89,126,179,121,85,183,189,199,269,116,203,247,94,90,115,136,80,97,109,54,276,	0,1392,3892,4924,6254,6877,7093,9522,10772,11960,18611,20057,22797,24784,25574,26953,28029,31724,32789,33567,37741,37943,40240,
#Deleted in new
chr15_KI270848v1_alt	97285	136593	chr15_KI270848v1_alt:97285-136593	1	-	97523	136564	789624	22	386,89,126,179,121,85,183,189,199,269,116,203,247,94,90,115,136,80,97,109,54,175,	0,2785,3817,5147,5770,5986,8415,9665,10853,17504,18950,21690,23677,24467,25846,26922,30617,31682,32460,36634,36836,39133,
#Deleted in new
chr15_KI270848v1_alt	100096	101571	chr15_KI270848v1_alt:100096-101571	0	-	100096	100096	8553170	2	63,469,	0,1006,
#Deleted in new
chr15_KI270848v1_alt	102432	105883	chr15_KI270848v1_alt:102432-105883	0	-	102432	105883	789624	5	179,121,85,108,183,	0,623,839,3027,3268,
#Deleted in new
chr15_KI270848v1_alt	102799	105799	chr15_KI270848v1_alt:102799-105799	0	-	102799	102799	8553170	3	377,85,99,	0,472,2901,
#Deleted in new
chr15_KI270848v1_alt	106965	121392	chr15_KI270848v1_alt:106965-121392	0	-	106965	106965	8553170	6	174,199,269,162,203,1303,	0,1173,7824,9270,12010,13124,
#Deleted in new
chr15_KI270848v1_alt	123138	133987	chr15_KI270848v1_alt:123138-133987	0	-	123138	133987	789624	6	83,118,136,80,97,68,	0,1069,4764,5829,6607,10781,
#Deleted in new
chr15_KI270848v1_alt	123192	133971	chr15_KI270848v1_alt:123192-133971	0	-	123192	133971	789624	6	29,106,136,80,97,52,	0,1015,4710,5775,6553,10727,
#Deleted in new
chr15_KI270848v1_alt	124206	136587	chr15_KI270848v1_alt:124206-136587	0	-	129011	136564	789624	7	116,136,80,93,109,54,169,	0,3696,4761,5539,9713,9915,12212,
#Deleted in new
chr15_KI270848v1_alt	183254	195561	chr15_KI270848v1_alt:183254-195561	5	+	183254	183254	16724991	8	78,41,73,45,181,100,158,117,	0,377,876,1656,5562,7636,9100,12190,
#Deleted in new
chr15_KI270848v1_alt	190882	221840	chr15_KI270848v1_alt:190882-221840	7	+	190882	190882	16724991	4	108,156,142,67,	0,1472,29882,30891,
#Deleted in new
chr15_KI270848v1_alt	228775	237330	chr15_KI270848v1_alt:228775-237330	3	-	229297	237239	789624	9	546,1203,142,59,107,94,51,129,289,	0,1202,3062,3534,4971,5173,5355,6491,8266,
#Deleted in new
chr15_KI270848v1_alt	241070	244930	chr15_KI270848v1_alt:241070-244930	7	-	241070	241070	16724991	4	67,141,384,76,	0,926,1724,3784,
#Deleted in new
chr15_KI270848v1_alt	257935	268257	chr15_KI270848v1_alt:257935-268257	7	+	257935	257935	16724991	19	84,120,60,81,39,48,85,110,90,108,88,257,69,86,92,101,101,158,182,	0,1783,2488,2731,3667,3979,4115,4295,5425,5621,5925,6401,6925,8362,8869,9529,9712,9897,10140,
#Deleted in new
chr15_KI270848v1_alt	266404	266694	chr15_KI270848v1_alt:266404-266694	3	+	266404	266404	8553170	1	290,	0,
#Deleted in new
chr15_KI270848v1_alt	280376	282557	chr15_KI270848v1_alt:280376-282557	7	+	280376	280376	16724991	1	2181,	0,
#Deleted in new
chr15_KI270848v1_alt	293998	294204	chr15_KI270848v1_alt:293998-294204	7	+	293998	293998	16724991	1	206,	0,
#Deleted in new
chr15_KI270848v1_alt	326383	326899	chr15_KI270848v1_alt:326383-326899	7	-	326383	326383	16724991	2	220,180,	0,336,
#Deleted in new
chr15_KI270849v1_alt	3082	7492	chr15_KI270849v1_alt:3082-7492	3	-	3082	3082	8553170	1	4410,	0,
#Deleted in new
chr15_KI270849v1_alt	20669	20767	chr15_KI270849v1_alt:20669-20767	3	-	20669	20669	8553170	1	98,	0,
#Deleted in new
chr15_KI270849v1_alt	34368	34665	chr15_KI270849v1_alt:34368-34665	3	+	34368	34368	8553170	1	297,	0,
#Deleted in new
chr15_KI270849v1_alt	34825	42225	chr15_KI270849v1_alt:34825-42225	3	+	34895	39688	0	4	137,279,28,1271,	0,3943,4849,6129,
#Deleted in new
chr15_KI270849v1_alt	34835	41507	chr15_KI270849v1_alt:34835-41507	1	+	34895	39688	789624	5	127,36,189,28,553,	0,3933,4023,4839,6119,
#Deleted in new
chr15_KI270849v1_alt	34835	41113	chr15_KI270849v1_alt:34835-41113	0	+	34835	34835	8553170	3	127,934,159,	0,3933,6119,
#Deleted in new
chr15_KI270849v1_alt	34857	42199	chr15_KI270849v1_alt:34857-42199	0	+	34895	39688	0	5	105,279,28,98,94,	0,3911,4817,6097,7248,
#Deleted in new
chr15_KI270849v1_alt	34861	40375	chr15_KI270849v1_alt:34861-40375	1	+	34895	39688	0	3	101,279,701,	0,3907,4813,
#Deleted in new
chr15_KI270849v1_alt	34865	41415	chr15_KI270849v1_alt:34865-41415	0	+	34895	39008	789624	4	87,156,28,461,	0,4026,4809,6089,
#Deleted in new
chr15_KI270849v1_alt	34867	40970	chr15_KI270849v1_alt:34867-40970	0	+	34895	38868	789624	4	95,268,28,16,	0,3912,4807,6087,
#Deleted in new
chr15_KI270849v1_alt	35275	41052	chr15_KI270849v1_alt:35275-41052	0	+	35275	35275	8553170	4	94,279,28,98,	0,3493,4399,5679,
#Deleted in new
chr15_KI270849v1_alt	35307	39905	chr15_KI270849v1_alt:35307-39905	0	+	35307	35307	8553170	3	62,279,231,	0,3461,4367,
#Deleted in new
chr15_KI270849v1_alt	36125	38525	chr15_KI270849v1_alt:36125-38525	0	+	36125	36125	8553170	1	2400,	0,
#Deleted in new
chr15_KI270849v1_alt	37852	41492	chr15_KI270849v1_alt:37852-41492	0	+	37852	37852	8553170	2	42,538,	0,3102,
#Deleted in new
chr15_KI270849v1_alt	38845	41493	chr15_KI270849v1_alt:38845-41493	0	+	38845	39688	789624	4	202,28,185,302,	0,829,2109,2346,
#Deleted in new
chr15_KI270849v1_alt	39071	40285	chr15_KI270849v1_alt:39071-40285	0	+	39071	39071	8553170	2	152,320,	0,894,
#Deleted in new
chr15_KI270849v1_alt	39162	41493	chr15_KI270849v1_alt:39162-41493	0	+	39162	39162	8553170	1	2331,	0,
#Deleted in new
chr15_KI270849v1_alt	52356	91198	chr15_KI270849v1_alt:52356-91198	1	+	60081	91143	789624	8	565,369,477,96,234,23,125,597,	0,7362,25924,27392,29645,30664,30772,38245,
#Deleted in new
chr15_KI270849v1_alt	52369	56229	chr15_KI270849v1_alt:52369-56229	0	+	52369	52369	789624	2	552,1486,	0,2374,
#Deleted in new
chr15_KI270849v1_alt	52423	59990	chr15_KI270849v1_alt:52423-59990	0	+	52423	52423	8553170	3	498,104,53,	0,7295,7514,
#Deleted in new
chr15_KI270849v1_alt	52441	59939	chr15_KI270849v1_alt:52441-59939	0	+	52441	52441	8553170	2	480,80,	0,7418,
#Deleted in new
chr15_KI270849v1_alt	52510	55096	chr15_KI270849v1_alt:52510-55096	0	+	52510	52510	8553170	2	208,353,	0,2233,
#Deleted in new
chr15_KI270849v1_alt	59738	91198	chr15_KI270849v1_alt:59738-91198	1	+	60081	91143	789624	7	349,477,96,234,23,125,597,	0,18542,20010,22263,23282,23390,30863,
#Deleted in new
chr15_KI270849v1_alt	59906	91196	chr15_KI270849v1_alt:59906-91196	1	+	82034	91143	0	6	181,96,191,23,125,595,	0,19842,22087,23114,23222,30695,
#Deleted in new
chr15_KI270849v1_alt	59906	91196	chr15_KI270849v1_alt:59906-91196	1	+	82034	91143	0	6	181,96,242,23,125,595,	0,19842,22087,23114,23222,30695,
#Deleted in new
chr15_KI270849v1_alt	59911	91198	chr15_KI270849v1_alt:59911-91198	1	+	60081	91143	789624	5	176,96,23,125,597,	0,19837,23109,23217,30690,
#Deleted in new
chr15_KI270849v1_alt	59942	91200	chr15_KI270849v1_alt:59942-91200	3	+	60081	91143	0	6	145,96,234,23,125,599,	0,19806,22059,23078,23186,30659,
#Deleted in new
chr15_KI270849v1_alt	76298	91198	chr15_KI270849v1_alt:76298-91198	0	+	76298	76298	8553170	5	2459,2487,23,125,597,	0,3450,6722,6830,14303,
#Deleted in new
chr15_KI270849v1_alt	82154	90814	chr15_KI270849v1_alt:82154-90814	0	+	82154	90814	789624	4	30,23,125,213,	0,866,974,8447,
#Deleted in new
chr15_KI270849v1_alt	150688	153049	chr15_KI270849v1_alt:150688-153049	5	-	150688	150688	16724991	2	853,282,	0,2079,
#Deleted in new
chr15_KI270849v1_alt	151268	154755	chr15_KI270849v1_alt:151268-154755	4	-	151268	151268	16724991	3	273,122,201,	0,1499,3286,
#Deleted in new
chr15_KI270849v1_alt	151380	193714	chr15_KI270849v1_alt:151380-193714	5	-	151380	151380	16724991	9	161,122,175,66,119,160,165,34,66,	0,1387,4466,5271,8126,12314,20343,23299,42268,
#Deleted in new
chr15_KI270849v1_alt	151519	216558	chr15_KI270849v1_alt:151519-216558	7	-	151519	151519	16724991	10	22,122,175,66,119,160,165,34,111,71,	0,1248,4327,5132,7987,12175,20204,23160,61839,64968,
#Deleted in new
chr15_KI270849v1_alt	154526	193817	chr15_KI270849v1_alt:154526-193817	4	-	154526	154526	16724991	7	824,175,66,119,165,34,169,	0,1320,2125,4980,17197,20153,39122,
#Deleted in new
chr15_KI270849v1_alt	167936	168049	chr15_KI270849v1_alt:167936-168049	3	+	167936	167936	8553170	1	113,	0,
#Deleted in new
chr15_KI270849v1_alt	216479	216644	chr15_KI270849v1_alt:216479-216644	3	+	216479	216479	8553170	1	165,	0,
#Deleted in new
chr15_KI270850v1_alt	8575	44645	chr15_KI270850v1_alt:8575-44645	7	+	8575	8575	16724991	20	351,166,84,125,256,93,146,170,134,122,245,142,127,214,1410,153,174,147,168,366,	0,2447,5767,6196,17700,18557,19046,20579,21075,22149,23525,24051,27158,27752,28293,30638,31225,31479,32783,35704,
#Deleted in new
chr15_KI270850v1_alt	8685	15834	chr15_KI270850v1_alt:8685-15834	4	+	8685	8685	16724991	4	241,166,84,82,	0,2337,5657,7067,
#Deleted in new
chr15_KI270850v1_alt	8878	14881	chr15_KI270850v1_alt:8878-14881	4	+	8878	8878	16724991	4	48,166,84,110,	0,2144,5464,5893,
#Deleted in new
chr15_KI270850v1_alt	52799	59514	chr15_KI270850v1_alt:52799-59514	3	-	52808	59452	789624	9	142,103,61,881,88,81,60,120,146,	0,351,1494,1821,3086,3838,4104,4786,6569,
#Deleted in new
chr15_KI270850v1_alt	52808	59452	chr15_KI270850v1_alt:52808-59452	1	-	52808	59452	789624	10	133,103,61,463,232,88,81,60,120,84,	0,342,1485,1812,2461,3077,3829,4095,4777,6560,
#Deleted in new
chr15_KI270850v1_alt	90833	103379	chr15_KI270850v1_alt:90833-103379	7	-	90833	90833	16724991	12	1547,37,69,90,187,237,159,133,171,479,194,100,	0,2179,2505,3073,3761,4816,7252,7554,9605,10386,11825,12446,
#Deleted in new
chr15_KI270850v1_alt	98046	105740	chr15_KI270850v1_alt:98046-105740	5	-	98046	98046	16724991	6	198,143,198,171,479,2461,	0,329,576,2392,3173,5233,
#Deleted in new
chr15_KI270850v1_alt	113266	122964	chr15_KI270850v1_alt:113266-122964	3	-	113356	122952	789624	4	252,150,51,45,	0,8029,9601,9653,
#Deleted in new
chr15_KI270850v1_alt	128990	138515	chr15_KI270850v1_alt:128990-138515	3	-	131769	138453	789624	10	2912,103,61,463,232,88,81,60,120,146,	0,3121,4264,4591,5282,5896,6648,6914,7596,9379,
#Deleted in new
chr15_KI270850v1_alt	131760	138515	chr15_KI270850v1_alt:131760-138515	1	-	131769	138453	789624	10	142,103,61,337,502,88,81,60,120,146,	0,351,1494,1821,2242,3126,3878,4144,4826,6609,
#Deleted in new
chr15_KI270850v1_alt	136318	138515	chr15_KI270850v1_alt:136318-138515	0	-	136318	136318	8553170	2	388,146,	0,2051,
#Deleted in new
chr15_KI270850v1_alt	144195	204696	chr15_KI270850v1_alt:144195-204696	7	+	144195	144195	16724991	5	239,57,140,80,1011,	0,45555,49502,53177,59490,
#Deleted in new
chr15_KI270850v1_alt	161298	162009	chr15_KI270850v1_alt:161298-162009	7	-	161298	161298	16724991	1	711,	0,
#Deleted in new
chr15_KI270850v1_alt	161311	161986	chr15_KI270850v1_alt:161311-161986	4	-	161311	161311	16724991	2	205,389,	0,286,
#Deleted in new
chr15_KI270850v1_alt	161409	161988	chr15_KI270850v1_alt:161409-161988	5	-	161409	161409	16724991	1	579,	0,
#Deleted in new
chr15_KI270850v1_alt	180944	209160	chr15_KI270850v1_alt:180944-209160	5	+	180944	180944	16724991	8	110,57,140,175,80,63,40,96,	0,8806,12753,15271,16428,20802,27348,28120,
#Deleted in new
chr15_KI270850v1_alt	203765	205088	chr15_KI270850v1_alt:203765-205088	4	+	203765	203765	16724991	2	124,476,	0,847,
#Deleted in new
chr15_KI270850v1_alt	203871	208476	chr15_KI270850v1_alt:203871-208476	4	+	203871	203871	16724991	5	18,148,157,40,24,	0,741,3849,4421,4581,
#Deleted in new
chr15_KI270850v1_alt	207735	223315	chr15_KI270850v1_alt:207735-223315	3	+	207735	207735	8553170	7	142,96,120,56,81,88,202,	0,1329,13175,13921,14162,14907,15378,
#Deleted in new
chr15_KI270850v1_alt	219102	221298	chr15_KI270850v1_alt:219102-221298	0	+	219102	219102	8553170	2	146,388,	0,1808,
#Deleted in new
chr15_KI270850v1_alt	219104	225842	chr15_KI270850v1_alt:219104-225842	3	+	219164	225491	789624	9	144,120,60,81,88,569,61,103,484,	0,1806,2548,2793,3538,4009,4844,5942,6254,
#Deleted in new
chr15_KI270850v1_alt	219129	228233	chr15_KI270850v1_alt:219129-228233	0	+	219129	219129	8553170	6	2849,88,569,61,103,2875,	0,3513,3984,4819,5917,6229,
#Deleted in new
chr15_KI270850v1_alt	234750	243765	chr15_KI270850v1_alt:234750-243765	7	+	234750	234750	16724991	2	33,120,	0,8895,
#Deleted in new
chr15_KI270850v1_alt	248554	259085	chr15_KI270850v1_alt:248554-259085	5	+	248554	248554	16724991	7	164,3504,479,171,199,133,159,	0,1833,6918,8007,9796,10096,10372,
#Deleted in new
chr15_KI270850v1_alt	253791	266338	chr15_KI270850v1_alt:253791-266338	7	+	253791	253791	16724991	12	100,194,479,171,133,159,237,187,90,69,37,1547,	0,527,1681,2770,4859,5135,7494,8599,9384,9973,10331,11000,
#Deleted in new
chr15_KI270850v1_alt	261279	262027	chr15_KI270850v1_alt:261279-262027	7	+	261279	261279	16724991	2	224,222,	0,526,
#Deleted in new
chr15_KI270850v1_alt	262072	303283	chr15_KI270850v1_alt:262072-303283	7	-	262072	262072	16724991	7	489,138,155,91,102,89,285,	0,2485,3793,4040,4488,4845,40926,
#Deleted in new
chr15_KI270850v1_alt	262499	303177	chr15_KI270850v1_alt:262499-303177	4	-	262499	262499	16724991	8	31,138,155,91,96,189,89,129,	0,2058,3366,3613,3783,3974,4418,40549,
#Deleted in new
chr15_KI270850v1_alt	262864	303283	chr15_KI270850v1_alt:262864-303283	5	-	262864	262864	16724991	7	29,138,155,91,96,189,285,	0,1693,3001,3248,3418,3609,40134,
#Deleted in new
chr15_KI270850v1_alt	265553	267008	chr15_KI270850v1_alt:265553-267008	5	-	265553	265553	16724991	6	221,155,91,96,153,164,	0,312,559,729,920,1291,
#Deleted in new
chr15_KI270850v1_alt	265978	303207	chr15_KI270850v1_alt:265978-303207	4	-	265978	265978	16724991	5	42,91,189,89,159,	0,134,495,939,37070,
#Deleted in new
chr15_KI270850v1_alt	266172	303237	chr15_KI270850v1_alt:266172-303237	4	-	266172	266172	16724991	3	31,189,239,	0,301,36826,
#Deleted in new
chr15_KI270850v1_alt	308933	313039	chr15_KI270850v1_alt:308933-313039	5	+	308933	308933	16724991	5	148,120,60,81,89,	0,1813,2554,2799,4017,
#Deleted in new
chr15_KI270850v1_alt	308997	315555	chr15_KI270850v1_alt:308997-315555	7	+	308997	308997	16724991	6	84,120,60,81,660,96,	0,1749,2490,2735,4107,6462,
#Deleted in new
chr15_KI270850v1_alt	320758	323245	chr15_KI270850v1_alt:320758-323245	7	-	320758	320758	16724991	3	60,261,112,	0,1373,2375,
#Deleted in new
chr15_KI270850v1_alt	325858	329670	chr15_KI270850v1_alt:325858-329670	3	-	325906	329534	0	5	129,66,106,152,139,	0,1553,2127,3228,3673,
#Deleted in new
chr15_KI270850v1_alt	325860	329565	chr15_KI270850v1_alt:325860-329565	1	-	327327	329534	789624	4	1617,106,152,34,	0,2125,3226,3671,
#Deleted in new
chr15_KI270850v1_alt	325860	329563	chr15_KI270850v1_alt:325860-329563	0	-	325860	325860	789624	4	127,66,106,477,	0,1551,2125,3226,
#Deleted in new
chr15_KI270850v1_alt	325864	329237	chr15_KI270850v1_alt:325864-329237	0	-	328453	329237	789624	5	123,66,106,76,151,	0,1547,2121,2541,3222,
#Deleted in new
chr15_KI270850v1_alt	325868	329248	chr15_KI270850v1_alt:325868-329248	0	-	325868	325868	8553170	3	1609,106,162,	0,2117,3218,
#Deleted in new
chr15_KI270850v1_alt	325893	329239	chr15_KI270850v1_alt:325893-329239	0	-	325893	325893	8553170	2	94,1828,	0,1518,
#Deleted in new
chr15_KI270850v1_alt	325914	329558	chr15_KI270850v1_alt:325914-329558	0	-	325914	325914	8553170	4	73,680,152,27,	0,1497,3172,3617,
#Deleted in new
chr15_KI270850v1_alt	327770	329525	chr15_KI270850v1_alt:327770-329525	0	-	327770	327770	8553170	2	321,439,	0,1316,
#Deleted in new
chr15_KI270850v1_alt	328689	329562	chr15_KI270850v1_alt:328689-329562	0	-	328689	328689	8553170	2	549,31,	0,842,
#Deleted in new
chr15_KI270850v1_alt	329137	345037	chr15_KI270850v1_alt:329137-345037	3	-	329137	345037	789624	8	101,81,95,199,137,90,114,63,	0,6408,7110,9427,12447,13434,13845,15837,
#Deleted in new
chr15_KI270850v1_alt	332305	345641	chr15_KI270850v1_alt:332305-345641	0	-	332305	332305	8553170	8	1502,81,95,199,137,90,114,667,	0,3240,3942,6259,9279,10266,10677,12669,
#Deleted in new
chr15_KI270850v1_alt	332307	419291	chr15_KI270850v1_alt:332307-419291	0	-	332307	332307	8553170	12	1500,81,95,199,137,90,114,253,227,189,175,1822,	0,3238,3940,6257,9277,10264,10675,12667,14557,28141,83991,85162,
#Deleted in new
chr15_KI270850v1_alt	332308	417258	chr15_KI270850v1_alt:332308-417258	3	-	333696	417258	789624	12	1499,81,95,199,137,90,114,253,227,189,175,15,	0,3237,3939,6256,9276,10263,10674,12666,14556,28140,83990,84935,
#Deleted in new
chr15_KI270850v1_alt	332938	360928	chr15_KI270850v1_alt:332938-360928	1	-	333696	360602	789624	11	869,81,95,199,137,105,114,253,227,189,190,	0,2607,3309,5626,8646,9618,10044,12036,13926,27510,27800,
#Deleted in new
chr15_KI270850v1_alt	332938	417575	chr15_KI270850v1_alt:332938-417575	1	-	333696	417438	789624	12	869,81,95,199,137,105,114,253,227,189,175,332,	0,2607,3309,5626,8646,9618,10044,12036,13926,27510,83360,84305,
#Deleted in new
chr15_KI270850v1_alt	333377	416473	chr15_KI270850v1_alt:333377-416473	0	-	333696	416473	789624	11	430,81,95,199,137,90,114,253,227,189,175,	0,2168,2870,5187,8207,9194,9605,11597,13487,27071,82921,
#Deleted in new
chr15_KI270850v1_alt	333399	360864	chr15_KI270850v1_alt:333399-360864	1	-	333696	360602	789624	11	408,81,95,199,137,90,114,253,227,189,126,	0,2146,2848,5165,8185,9172,9583,11575,13465,27049,27339,
#Deleted in new
chr15_KI270850v1_alt	333399	362316	chr15_KI270850v1_alt:333399-362316	1	-	333696	362299	789624	11	408,81,95,199,137,90,114,253,227,189,216,	0,2146,2848,5165,8185,9172,9583,11575,13465,27049,28701,
#Deleted in new
chr15_KI270850v1_alt	333401	360914	chr15_KI270850v1_alt:333401-360914	1	-	333696	360602	789624	10	406,81,95,199,137,90,114,253,227,466,	0,2144,2846,5163,8183,9170,9581,11573,13463,27047,
#Deleted in new
chr15_KI270850v1_alt	333414	416473	chr15_KI270850v1_alt:333414-416473	1	-	333696	360602	789624	11	393,81,95,199,137,90,114,253,227,189,175,	0,2131,2833,5150,8170,9157,9568,11560,13450,27034,82884,
#Deleted in new
chr15_KI270850v1_alt	333462	416473	chr15_KI270850v1_alt:333462-416473	1	-	333696	360602	789624	12	345,81,95,199,137,90,114,253,227,189,92,175,	0,2083,2785,5102,8122,9109,9520,11512,13402,26986,39012,82836,
#Deleted in new
chr15_KI270850v1_alt	333557	360889	chr15_KI270850v1_alt:333557-360889	0	-	343086	360602	789624	10	250,81,95,199,137,90,114,253,189,151,	0,1988,2690,5007,8027,9014,9425,11417,26891,27181,
#Deleted in new
chr15_KI270850v1_alt	346626	360552	chr15_KI270850v1_alt:346626-360552	0	-	346626	346626	8553170	2	465,104,	0,13822,
#Deleted in new
chr15_KI270850v1_alt	346903	361183	chr15_KI270850v1_alt:346903-361183	0	-	346903	360602	789624	3	188,189,177,	0,13545,14103,
#Deleted in new
chr15_KI270850v1_alt	360495	430788	chr15_KI270850v1_alt:360495-430788	0	-	360495	360602	789624	4	142,175,50,58,	0,55803,61782,70235,
#Deleted in new
chr15_KI270850v1_alt	360550	416473	chr15_KI270850v1_alt:360550-416473	0	-	360550	360602	789624	2	87,175,	0,55748,
#Deleted in new
chr15_KI270850v1_alt	416394	416473	chr15_KI270850v1_alt:416394-416473	0	-	416394	416394	8553170	1	79,	0,
#Deleted in new
chr15_KI270850v1_alt	422287	430788	chr15_KI270850v1_alt:422287-430788	0	-	422287	422287	8553170	4	40,70,209,58,	0,5383,7475,8443,
#Deleted in new
chr15_KI270851v1_alt	5128	5408	chr15_KI270851v1_alt:5128-5408	7	+	5128	5128	16724991	1	280,	0,
#Deleted in new
chr15_KI270851v1_alt	16226	18061	chr15_KI270851v1_alt:16226-18061	7	+	16226	16226	16724991	1	1835,	0,
#Deleted in new
chr15_KI270851v1_alt	45676	51413	chr15_KI270851v1_alt:45676-51413	7	+	45676	45676	16724991	3	200,122,3895,	0,1472,1842,
#Deleted in new
chr15_KI270851v1_alt	71513	81408	chr15_KI270851v1_alt:71513-81408	5	-	71513	71513	16724991	18	780,153,101,101,92,76,69,257,88,108,87,110,85,360,81,60,120,58,	0,865,1107,1290,1959,2482,3926,4262,4888,5171,5385,6496,6701,6874,8089,8353,8998,9837,
#Deleted in new
chr15_KI270851v1_alt	72108	82378	chr15_KI270851v1_alt:72108-82378	7	-	72108	72108	16724991	18	185,153,101,101,92,76,69,257,88,108,90,110,85,360,81,60,120,48,	0,270,512,695,1364,1887,3331,3667,4293,4576,4790,5901,6106,6279,7494,7758,8403,10222,
#Deleted in new
chr15_KI270851v1_alt	73674	73964	chr15_KI270851v1_alt:73674-73964	3	-	73674	73674	8553170	1	290,	0,
#Deleted in new
chr15_KI270851v1_alt	95361	99307	chr15_KI270851v1_alt:95361-99307	7	+	95361	95361	16724991	3	157,1182,67,	0,1820,3879,
#Deleted in new
chr15_KI270851v1_alt	103147	111178	chr15_KI270851v1_alt:103147-111178	1	+	103147	111104	789624	10	75,54,129,51,94,107,59,142,1245,98,	0,108,1808,3023,3162,3351,4844,5233,6032,7933,
#Deleted in new
chr15_KI270851v1_alt	103258	112824	chr15_KI270851v1_alt:103258-112824	3	+	103258	111104	789624	9	51,129,51,94,107,59,142,1242,1744,	0,1697,2912,3051,3240,4733,5122,5924,7822,
#Deleted in new
chr15_KI270851v1_alt	124075	128477	chr15_KI270851v1_alt:124075-128477	7	-	124075	124075	16724991	4	173,125,227,234,	0,1539,1756,4168,
#Deleted in new
chr15_KI270851v1_alt	139180	224046	chr15_KI270851v1_alt:139180-224046	7	+	139180	139180	16724991	32	103,115,176,171,104,151,215,133,128,196,134,169,143,152,192,188,193,183,182,148,197,231,139,144,143,253,137,99,174,126,130,230,	0,21916,39105,42476,43031,44135,47035,47523,47762,47982,50808,51471,51717,51977,52920,59427,61054,61952,64825,65823,66293,66594,67984,69424,74177,77964,78314,79010,82211,82482,84400,84636,
#Deleted in new
chr15_KI270851v1_alt	161129	235188	chr15_KI270851v1_alt:161129-235188	5	+	161129	161129	16724991	32	82,176,171,104,151,215,133,128,196,134,169,143,152,192,188,193,183,182,148,197,231,139,144,143,253,137,99,174,126,140,48,873,	0,17156,20527,21082,22186,25086,25574,25813,26033,28859,29522,29768,30028,30971,37478,39105,40003,42876,43874,44344,44645,46035,47475,52228,56015,56365,57061,60262,60533,62687,70592,73186,
#Deleted in new
chr15_KI270851v1_alt	205649	208683	chr15_KI270851v1_alt:205649-208683	4	+	205649	205649	16724991	5	21,376,89,139,79,	0,125,1209,1515,2955,
#Deleted in new
chr15_KI270851v1_alt	251875	262088	chr15_KI270851v1_alt:251875-262088	7	-	251875	251875	16724991	17	176,156,98,101,76,69,257,88,108,87,110,85,288,81,60,120,48,	0,260,511,691,1889,3213,3537,4162,4445,4659,5631,5836,6009,7150,7412,8375,10165,
#Deleted in new
chr15_KI270851v1_alt	253476	253713	chr15_KI270851v1_alt:253476-253713	3	-	253476	253476	8553170	1	237,	0,
#Deleted in new
chr15_KI270851v1_alt	254688	262186	chr15_KI270851v1_alt:254688-262186	5	-	254688	254688	16724991	12	469,257,88,108,87,110,85,288,81,60,120,146,	0,724,1349,1632,1846,2818,3023,3196,4337,4599,5562,7352,
#Deleted in new
chr15_KI270852v1_alt	8089	18057	chr15_KI270852v1_alt:8089-18057	7	-	8089	8089	16724991	3	117,142,123,	0,7133,9845,
#Deleted in new
chr15_KI270852v1_alt	51544	53093	chr15_KI270852v1_alt:51544-53093	7	-	51544	51544	16724991	1	1549,	0,
#Deleted in new
chr15_KI270852v1_alt	56125	83263	chr15_KI270852v1_alt:56125-83263	3	-	56125	56125	8553170	2	1911,254,	0,26884,
#Deleted in new
chr15_KI270852v1_alt	65640	65747	chr15_KI270852v1_alt:65640-65747	3	+	65640	65640	8553170	1	107,	0,
#Deleted in new
chr15_KI270852v1_alt	86401	101847	chr15_KI270852v1_alt:86401-101847	3	-	86401	86401	8553170	2	601,151,	0,15295,
#Deleted in new
chr15_KI270852v1_alt	100136	101924	chr15_KI270852v1_alt:100136-101924	3	+	100136	100136	8553170	2	517,557,	0,1231,
#Deleted in new
chr15_KI270852v1_alt	102514	103052	chr15_KI270852v1_alt:102514-103052	7	-	102514	102514	16724991	1	538,	0,
#Deleted in new
chr15_KI270852v1_alt	126427	128627	chr15_KI270852v1_alt:126427-128627	3	+	126427	126427	8553170	1	2200,	0,
#Deleted in new
chr15_KI270852v1_alt	130591	145190	chr15_KI270852v1_alt:130591-145190	7	-	130591	130591	16724991	2	1428,66,	0,14533,
#Deleted in new
chr15_KI270852v1_alt	130797	131886	chr15_KI270852v1_alt:130797-131886	5	-	130797	130797	16724991	1	1089,	0,
#Deleted in new
chr15_KI270852v1_alt	140376	140836	chr15_KI270852v1_alt:140376-140836	7	+	140376	140376	16724991	1	460,	0,
#Deleted in new
chr15_KI270852v1_alt	141814	142058	chr15_KI270852v1_alt:141814-142058	7	+	141814	141814	16724991	1	244,	0,
#Deleted in new
chr15_KI270852v1_alt	166189	198391	chr15_KI270852v1_alt:166189-198391	0	-	178648	197951	789624	10	953,124,167,45,71,138,107,174,115,961,	0,2637,11231,12443,19456,22035,23510,26425,26758,31241,
#Deleted in new
chr15_KI270852v1_alt	166903	197999	chr15_KI270852v1_alt:166903-197999	3	-	166929	197951	789624	11	239,124,167,45,71,71,138,107,174,115,569,	0,1923,10517,11729,13177,18742,21321,22796,25711,26044,30527,
#Deleted in new
chr15_KI270852v1_alt	166910	197733	chr15_KI270852v1_alt:166910-197733	0	-	178648	197733	789624	9	232,124,167,45,71,107,174,115,303,	0,1916,10510,11722,18735,22789,25704,26037,30520,
#Deleted in new
chr15_KI270852v1_alt	182979	198322	chr15_KI270852v1_alt:182979-198322	0	-	184189	197951	789624	8	271,221,71,138,107,174,115,892,	0,1009,2666,5245,6720,9635,9968,14451,
#Deleted in new
chr15_KI270852v1_alt	186839	186946	chr15_KI270852v1_alt:186839-186946	3	-	186839	186839	8553170	1	107,	0,
#Deleted in new
chr15_KI270852v1_alt	248280	260874	chr15_KI270852v1_alt:248280-260874	7	-	248280	248280	16724991	8	106,146,111,89,40,166,208,100,	0,3710,5076,6459,7823,9904,12166,12494,
#Deleted in new
chr15_KI270852v1_alt	257927	267301	chr15_KI270852v1_alt:257927-267301	5	-	257927	257927	16724991	12	114,166,208,182,121,84,123,140,440,84,73,273,	0,257,2519,2847,3613,4888,5437,5842,6340,8175,8493,9101,
#Deleted in new
chr15_KI270852v1_alt	272029	324899	chr15_KI270852v1_alt:272029-324899	3	+	272029	272029	8553170	5	329,186,44,158,2682,	0,1937,31669,41378,50188,
#Deleted in new
chr15_KI270852v1_alt	292301	293181	chr15_KI270852v1_alt:292301-293181	7	+	292301	292301	16724991	1	880,	0,
#Deleted in new
chr15_KI270852v1_alt	310633	405685	chr15_KI270852v1_alt:310633-405685	3	+	310633	310633	789624	11	71,158,109,95,389,96,89,204,53,245,91,	0,2774,11584,42815,56321,70636,71236,71547,92508,92769,94961,
#Deleted in new
chr15_KI270852v1_alt	337752	418371	chr15_KI270852v1_alt:337752-418371	1	+	337752	337752	8553170	7	99,95,389,96,89,204,1352,	0,15696,29202,43517,44117,44428,79267,
#Deleted in new
chr15_KI270852v1_alt	403072	404156	chr15_KI270852v1_alt:403072-404156	3	+	403170	404112	789624	1	1084,	0,
#Deleted in new
chr15_KI270852v1_alt	416937	418063	chr15_KI270852v1_alt:416937-418063	3	+	417028	417979	789624	1	1126,	0,
#Deleted in new
chr15_KI270852v1_alt	417066	418134	chr15_KI270852v1_alt:417066-418134	0	+	417066	417979	789624	2	232,557,	0,511,
#Deleted in new
chr15_KI270852v1_alt	448033	448958	chr15_KI270852v1_alt:448033-448958	7	+	448033	448033	16724991	1	925,	0,
#Deleted in new
chr15_KI270852v1_alt	474644	475266	chr15_KI270852v1_alt:474644-475266	7	-	474644	474644	16724991	1	622,	0,
#Deleted in new
chr15_KI270905v1_alt	5440	233611	chr15_KI270905v1_alt:5440-233611	0	-	5440	216174	789624	20	105,60,128,109,58,148,133,139,125,57,66,154,83,161,73,58,189,99,248,89,	0,709,54973,80630,84004,86434,95528,112171,113890,115413,118429,143635,144963,147256,151359,153703,156729,160923,210507,228082,
#Deleted in new
chr15_KI270905v1_alt	5440	233657	chr15_KI270905v1_alt:5440-233657	2	-	5440	216174	789624	21	105,60,128,109,58,148,133,139,125,57,66,72,154,83,161,73,58,189,99,248,135,	0,709,54973,80630,84004,86434,95528,112171,113890,115413,118429,119404,143635,144963,147256,151359,153703,156729,160923,210507,228082,
#Deleted in new
chr15_KI270905v1_alt	29990	30869	chr15_KI270905v1_alt:29990-30869	7	+	29990	29990	16724991	1	879,	0,
#Deleted in new
chr15_KI270905v1_alt	101066	102131	chr15_KI270905v1_alt:101066-102131	0	-	101066	101066	8553170	2	35,541,	0,524,
#Deleted in new
chr15_KI270905v1_alt	119407	137340	chr15_KI270905v1_alt:119407-137340	0	-	119407	119407	8553170	3	48,57,476,	0,1446,17457,
#Deleted in new
chr15_KI270905v1_alt	119437	150432	chr15_KI270905v1_alt:119437-150432	1	-	119437	150432	789624	6	18,57,66,72,154,29,	0,1416,4432,5407,29638,30966,
#Deleted in new
chr15_KI270905v1_alt	150403	233595	chr15_KI270905v1_alt:150403-233595	0	-	150403	216174	789624	6	83,58,189,99,248,73,	0,8740,11766,15960,65544,83119,
#Deleted in new
chr15_KI270905v1_alt	152711	233592	chr15_KI270905v1_alt:152711-233592	0	-	152711	216174	789624	7	146,73,58,189,99,248,183,	0,4088,6432,9458,13652,63236,80698,
#Deleted in new
chr15_KI270905v1_alt	244503	325592	chr15_KI270905v1_alt:244503-325592	0	-	245227	325592	789624	41	997,213,106,191,113,195,142,84,198,188,140,92,162,178,215,199,116,156,126,119,159,132,108,154,192,141,184,172,226,145,172,82,178,91,144,82,112,176,92,106,191,	0,2032,2534,3573,4391,5627,5975,10281,12971,13939,19098,19438,21037,21590,24414,30370,30669,31176,31765,32811,33015,33611,35175,41615,52032,56625,57345,58422,63332,64449,65365,65624,65887,66356,67824,68079,71338,75514,79902,80076,80898,
#Deleted in new
chr15_KI270905v1_alt	244745	251017	chr15_KI270905v1_alt:244745-251017	3	-	245227	250959	789624	7	755,213,106,191,113,195,539,	0,1790,2292,3331,4149,5385,5733,
#Deleted in new
chr15_KI270905v1_alt	503096	569367	chr15_KI270905v1_alt:503096-569367	0	-	503096	568657	789624	19	131,229,201,194,252,114,158,152,189,174,172,111,157,101,220,135,115,103,69,	0,223,1195,4911,7052,9752,9951,12599,13382,14829,16349,17028,18425,19039,24202,37016,43529,65489,66202,
#Deleted in new
chr15_KI270905v1_alt	562874	563283	chr15_KI270905v1_alt:562874-563283	7	+	562874	562874	16724991	1	409,	0,
#Deleted in new
chr15_KI270905v1_alt	579444	582280	chr15_KI270905v1_alt:579444-582280	7	+	579444	579444	16724991	3	203,227,129,	0,2388,2707,
#Deleted in new
chr15_KI270905v1_alt	593704	593862	chr15_KI270905v1_alt:593704-593862	7	+	593704	593704	16724991	1	158,	0,
#Deleted in new
chr15_KI270905v1_alt	596265	605217	chr15_KI270905v1_alt:596265-605217	7	-	596265	596265	16724991	9	544,1761,142,59,107,94,51,129,131,	0,1200,3617,4089,5525,5727,5909,7046,8821,
#Deleted in new
chr15_KI270905v1_alt	609964	612899	chr15_KI270905v1_alt:609964-612899	7	-	609964	609964	16724991	3	145,383,92,	0,801,2843,
#Deleted in new
chr15_KI270905v1_alt	625802	629724	chr15_KI270905v1_alt:625802-629724	5	+	625802	625802	16724991	5	60,120,60,81,153,	0,1886,2591,2834,3769,
#Deleted in new
chr15_KI270905v1_alt	625825	630245	chr15_KI270905v1_alt:625825-630245	4	+	625825	625825	16724991	7	166,120,60,81,360,85,46,	0,1863,2568,2811,3746,4194,4374,
#Deleted in new
chr15_KI270905v1_alt	625845	639202	chr15_KI270905v1_alt:625845-639202	7	+	625845	625845	16724991	18	146,120,60,81,360,85,110,90,108,88,257,69,76,92,101,101,153,3143,	0,1843,2548,2791,3726,4174,4354,5483,5679,5982,6460,6984,8424,8937,9603,9786,9976,10214,
#Deleted in new
chr15_KI270905v1_alt	625845	628635	chr15_KI270905v1_alt:625845-628635	4	+	625845	625845	16724991	3	146,120,242,	0,1843,2548,
#Deleted in new
chr15_KI270905v1_alt	625846	639202	chr15_KI270905v1_alt:625846-639202	5	+	625846	625846	16724991	17	145,120,60,1295,85,110,90,108,88,257,69,76,92,101,101,153,3143,	0,1842,2547,2790,4173,4353,5482,5678,5981,6459,6983,8423,8936,9602,9785,9975,10213,
#Deleted in new
chr15_KI270905v1_alt	634375	634633	chr15_KI270905v1_alt:634375-634633	3	+	634375	634375	8553170	1	258,	0,
#Deleted in new
chr15_KI270905v1_alt	649963	652126	chr15_KI270905v1_alt:649963-652126	7	+	649963	649963	16724991	1	2163,	0,
#Deleted in new
chr15_KI270905v1_alt	663545	663771	chr15_KI270905v1_alt:663545-663771	7	+	663545	663545	16724991	1	226,	0,
#Deleted in new
chr15_KI270905v1_alt	669317	669470	chr15_KI270905v1_alt:669317-669470	7	+	669317	669317	16724991	1	153,	0,
#Deleted in new
chr15_KI270905v1_alt	675017	675170	chr15_KI270905v1_alt:675017-675170	7	+	675017	675017	16724991	1	153,	0,
#Deleted in new
chr15_KI270905v1_alt	680717	680870	chr15_KI270905v1_alt:680717-680870	7	+	680717	680717	16724991	1	153,	0,
#Deleted in new
chr15_KI270905v1_alt	686417	686570	chr15_KI270905v1_alt:686417-686570	7	+	686417	686417	16724991	1	153,	0,
#Deleted in new
chr15_KI270905v1_alt	692113	692266	chr15_KI270905v1_alt:692113-692266	7	+	692113	692113	16724991	1	153,	0,
#Deleted in new
chr15_KI270905v1_alt	697761	697966	chr15_KI270905v1_alt:697761-697966	7	+	697761	697761	16724991	1	205,	0,
#Deleted in new
chr15_KI270905v1_alt	719930	720056	chr15_KI270905v1_alt:719930-720056	7	+	719930	719930	16724991	1	126,	0,
#Deleted in new
chr15_KI270905v1_alt	730458	733583	chr15_KI270905v1_alt:730458-733583	7	-	730458	730458	16724991	3	409,179,172,	0,520,2953,
#Deleted in new
chr15_KI270905v1_alt	749126	749250	chr15_KI270905v1_alt:749126-749250	7	-	749126	749126	16724991	1	124,	0,
#Deleted in new
chr15_KI270905v1_alt	770771	770979	chr15_KI270905v1_alt:770771-770979	7	-	770771	770771	16724991	1	208,	0,
#Deleted in new
chr15_KI270905v1_alt	782423	784605	chr15_KI270905v1_alt:782423-784605	7	-	782423	782423	16724991	1	2182,	0,
#Deleted in new
chr15_KI270905v1_alt	795405	808766	chr15_KI270905v1_alt:795405-808766	0	-	795405	795405	789624	18	3147,153,101,101,92,76,81,257,88,108,90,110,85,360,81,60,120,146,	0,3232,3474,3657,4332,4861,6296,6644,7291,7574,7788,8899,9104,9277,10491,10753,11398,13215,
#Deleted in new
chr15_KI270905v1_alt	795409	808765	chr15_KI270905v1_alt:795409-808765	2	-	795409	795409	8553170	17	3143,153,101,101,92,76,69,257,88,108,90,110,85,1295,60,120,145,	0,3228,3470,3653,4328,4857,6304,6640,7287,7570,7784,8895,9100,9273,10749,11394,13211,
#Deleted in new
chr15_KI270905v1_alt	795409	808766	chr15_KI270905v1_alt:795409-808766	0	-	795409	795409	8553170	18	3143,153,101,101,92,76,69,257,88,108,90,110,85,360,81,60,120,146,	0,3228,3470,3653,4328,4857,6304,6640,7287,7570,7784,8895,9100,9273,10487,10749,11394,13211,
#Deleted in new
chr15_KI270905v1_alt	796557	806207	chr15_KI270905v1_alt:796557-806207	0	-	796557	796557	8553170	15	1995,153,101,101,76,69,257,88,108,90,110,85,360,81,49,	0,2080,2322,2505,3709,5156,5492,6139,6422,6636,7747,7952,8125,9339,9601,
#Deleted in new
chr15_KI270905v1_alt	798367	808766	chr15_KI270905v1_alt:798367-808766	1	-	798367	808704	789624	19	185,153,101,101,92,76,69,257,88,108,90,110,85,48,39,81,60,120,146,	0,270,512,695,1370,1899,3346,3682,4329,4612,4826,5937,6142,6315,6636,7529,7791,8436,10253,
#Deleted in new
chr15_KI270905v1_alt	799945	800235	chr15_KI270905v1_alt:799945-800235	3	-	799945	799945	8553170	1	290,	0,
#Deleted in new
chr15_KI270905v1_alt	821706	825572	chr15_KI270905v1_alt:821706-825572	7	+	821706	821706	16724991	4	92,313,141,76,	0,1760,2792,3790,
#Deleted in new
chr15_KI270905v1_alt	829428	837166	chr15_KI270905v1_alt:829428-837166	7	+	829428	829428	16724991	8	129,129,51,94,107,59,142,1757,	0,1775,2989,3128,3317,4794,5183,5981,
#Deleted in new
chr15_KI270905v1_alt	840776	840935	chr15_KI270905v1_alt:840776-840935	7	-	840776	840776	16724991	1	159,	0,
#Deleted in new
chr15_KI270905v1_alt	850809	855182	chr15_KI270905v1_alt:850809-855182	7	-	850809	850809	16724991	4	170,125,227,194,	0,1549,1766,4179,
#Deleted in new
chr15_KI270905v1_alt	865979	949817	chr15_KI270905v1_alt:865979-949817	7	+	865979	865979	16724991	33	72,115,132,176,171,104,151,215,133,128,196,134,171,143,152,192,188,193,183,182,148,197,231,139,144,143,268,137,99,174,126,110,140,	0,21870,28335,39077,42448,43003,43401,46298,46786,47026,47246,50070,50733,50981,51241,52184,58691,60318,61216,64085,65084,65306,65607,66998,68434,73188,77005,77370,78066,81270,81541,83482,83698,
#Deleted in new
chr15_KI270905v1_alt	887932	909065	chr15_KI270905v1_alt:887932-909065	4	+	887932	887932	16724991	6	32,160,132,176,171,83,	0,6077,6382,17124,20495,21050,
#Deleted in new
chr15_KI270905v1_alt	930232	961054	chr15_KI270905v1_alt:930232-961054	4	+	930232	930232	16724991	14	14,148,231,139,144,143,268,137,99,174,126,140,48,1136,	0,831,1354,2745,4181,8935,12752,13117,13813,17017,17288,19445,27353,29686,
#Deleted in new
chr15_KI270905v1_alt	953739	961057	chr15_KI270905v1_alt:953739-961057	5	+	953739	953739	16724991	1	7318,	0,
#Deleted in new
chr15_KI270905v1_alt	977741	988111	chr15_KI270905v1_alt:977741-988111	7	-	977741	977741	16724991	18	176,156,98,101,76,69,257,88,108,87,110,85,48,39,81,60,120,48,	0,260,511,691,1888,3205,3529,4162,4445,4659,5794,5999,6172,6421,7313,7575,8533,10322,
#Deleted in new
chr15_KI270905v1_alt	979341	979578	chr15_KI270905v1_alt:979341-979578	3	-	979341	979341	8553170	1	237,	0,
#Deleted in new
chr15_KI270905v1_alt	1013373	1030658	chr15_KI270905v1_alt:1013373-1030658	5	+	1013373	1013373	16724991	8	603,174,151,170,166,191,87,61,	0,3527,7164,8395,10125,13903,16884,17224,
#Deleted in new
chr15_KI270905v1_alt	1016891	1034993	chr15_KI270905v1_alt:1016891-1034993	7	+	1016891	1016891	16724991	8	166,151,159,170,166,187,87,4396,	0,3646,4494,4877,6607,10385,13366,13706,
#Deleted in new
chr15_KI270905v1_alt	1039231	1039943	chr15_KI270905v1_alt:1039231-1039943	7	-	1039231	1039231	16724991	1	712,	0,
#Deleted in new
chr15_KI270905v1_alt	1064034	1065184	chr15_KI270905v1_alt:1064034-1065184	5	+	1064034	1064034	16724991	2	105,790,	0,360,
#Deleted in new
chr15_KI270905v1_alt	1064393	1067794	chr15_KI270905v1_alt:1064393-1067794	7	+	1064393	1064393	16724991	2	69,69,	0,3332,
#Deleted in new
chr15_KI270905v1_alt	1064990	1065278	chr15_KI270905v1_alt:1064990-1065278	7	+	1064990	1064990	16724991	1	288,	0,
#Deleted in new
chr15_KI270905v1_alt	1065455	1066096	chr15_KI270905v1_alt:1065455-1066096	7	+	1065455	1065455	16724991	2	318,180,	0,461,
#Deleted in new
chr15_KI270905v1_alt	1065618	1077284	chr15_KI270905v1_alt:1065618-1077284	4	+	1065618	1065618	16724991	4	155,43,69,123,	0,298,2107,11543,
#Deleted in new
chr15_KI270905v1_alt	1077157	1077288	chr15_KI270905v1_alt:1077157-1077288	5	+	1077157	1077157	16724991	1	131,	0,
#Deleted in new
chr15_KI270905v1_alt	1194321	1329052	chr15_KI270905v1_alt:1194321-1329052	0	+	1328842	1329052	789624	4	121,110,54,250,	0,2273,76381,134481,
#Deleted in new
chr15_KI270905v1_alt	1196594	1392764	chr15_KI270905v1_alt:1196594-1392764	1	+	1328842	1392176	789624	13	110,54,991,81,37,146,87,186,180,213,120,141,660,	0,74108,132208,153367,154501,171521,176932,180040,183829,185057,186720,192326,195510,
#Deleted in new
chr15_KI270905v1_alt	1196594	1393362	chr15_KI270905v1_alt:1196594-1393362	3	+	1328842	1392176	789624	14	110,54,991,81,37,146,36,87,186,180,213,120,141,1258,	0,74108,132208,153367,154501,171521,172724,176932,180040,183829,185057,186720,192326,195510,
#Deleted in new
chr15_KI270905v1_alt	1196594	1328855	chr15_KI270905v1_alt:1196594-1328855	0	+	1328842	1328855	8553170	3	110,54,53,	0,74108,132208,
#Deleted in new
chr15_KI270905v1_alt	1196594	1392764	chr15_KI270905v1_alt:1196594-1392764	1	+	1328842	1392176	789624	14	79,54,991,81,37,146,36,87,186,180,213,120,141,660,	0,74108,132208,153367,154501,171521,172724,176932,180040,183829,185057,186720,192326,195510,
#Deleted in new
chr15_KI270905v1_alt	1196594	1383665	chr15_KI270905v1_alt:1196594-1383665	0	+	1196594	1196594	8553170	11	110,54,991,81,37,146,87,186,180,213,351,	0,74108,132208,153367,154501,171521,176932,180040,183829,185057,186720,
#Deleted in new
chr15_KI270905v1_alt	1236258	1329178	chr15_KI270905v1_alt:1236258-1329178	0	+	1328842	1329178	789624	3	281,54,376,	0,34444,92544,
#Deleted in new
chr15_KI270905v1_alt	1265368	1328924	chr15_KI270905v1_alt:1265368-1328924	0	+	1328842	1328924	789624	3	378,54,122,	0,5334,63434,
#Deleted in new
chr15_KI270905v1_alt	1319277	1329633	chr15_KI270905v1_alt:1319277-1329633	0	+	1328842	1329633	789624	2	105,831,	0,9525,
#Deleted in new
chr15_KI270905v1_alt	1345698	1377795	chr15_KI270905v1_alt:1345698-1377795	0	+	1345698	1345698	8553170	6	442,81,37,146,87,1161,	0,4263,5397,22417,27828,30936,
#Deleted in new
chr15_KI270905v1_alt	1394882	1854904	chr15_KI270905v1_alt:1394882-1854904	3	-	1397967	1854904	789624	11	3402,75,225,76,136,161,108,135,111,57,219,	0,4433,6013,8535,17054,17722,32419,77110,133019,262394,459803,
#Deleted in new
chr15_KI270905v1_alt	1397943	1472250	chr15_KI270905v1_alt:1397943-1472250	0	-	1397943	1397943	8553170	8	341,75,225,76,136,161,108,258,	0,1372,2952,5474,13993,14661,29358,74049,
#Deleted in new
chr15_KI270905v1_alt	1427397	1728301	chr15_KI270905v1_alt:1427397-1728301	0	-	1427397	1427397	8553170	5	12,135,111,57,227,	0,44595,100504,229879,300677,
#Deleted in new
chr15_KI270905v1_alt	1509205	1510670	chr15_KI270905v1_alt:1509205-1510670	7	-	1509205	1509205	16724991	1	1465,	0,
#Deleted in new
chr15_KI270905v1_alt	1509400	1509512	chr15_KI270905v1_alt:1509400-1509512	3	+	1509400	1509400	8553170	1	112,	0,
#Deleted in new
chr15_KI270905v1_alt	1527998	1854166	chr15_KI270905v1_alt:1527998-1854166	0	-	1527998	1527998	8553170	3	14,57,483,	0,129278,325685,
#Deleted in new
chr15_KI270905v1_alt	1543699	1545380	chr15_KI270905v1_alt:1543699-1545380	3	-	1544341	1545256	0	1	1681,	0,
#Deleted in new
chr15_KI270905v1_alt	1649090	1652445	chr15_KI270905v1_alt:1649090-1652445	3	-	1649090	1649090	8553170	1	3355,	0,
#Deleted in new
chr15_KI270905v1_alt	1984288	2105666	chr15_KI270905v1_alt:1984288-2105666	1	-	1985724	2104683	789624	28	1531,144,218,478,170,228,98,873,351,101,211,83,96,185,220,109,151,106,140,148,169,104,277,103,125,57,148,133,	0,4003,5369,8400,10672,16452,17863,18108,20200,26221,26623,27779,32275,32473,32936,34116,37107,41177,42488,60977,61439,62173,66106,71902,73071,100476,120356,121245,
#Deleted in new
chr15_KI270905v1_alt	1984288	2106633	chr15_KI270905v1_alt:1984288-2106633	3	-	1985724	2084812	789624	27	1531,144,218,478,170,228,98,873,351,101,211,83,96,185,220,109,151,106,140,148,169,104,277,103,125,57,514,	0,4003,5369,8400,10672,16452,17863,18108,20200,26221,26623,27779,32275,32473,32936,34116,37107,41177,42488,60977,61439,62173,66106,71902,73071,100476,121831,
#Deleted in new
chr15_KI270905v1_alt	1984288	2106633	chr15_KI270905v1_alt:1984288-2106633	1	-	1985724	2106146	0	28	1531,144,218,478,170,228,98,873,240,351,101,211,83,96,185,220,109,151,106,140,148,169,104,277,103,125,57,514,	0,4003,5369,8400,10672,16452,17863,18108,19619,20200,26221,26623,27779,32275,32473,32936,34116,37107,41177,42488,60977,61439,62173,66106,71902,73071,100476,121831,
#Deleted in new
chr15_KI270905v1_alt	2014843	2015116	chr15_KI270905v1_alt:2014843-2015116	7	+	2014843	2014843	16724991	1	273,	0,
#Deleted in new
chr15_KI270905v1_alt	2044296	2106633	chr15_KI270905v1_alt:2044296-2106633	1	-	2044296	2106146	789624	9	139,148,169,104,277,103,125,57,514,	0,969,1431,2165,6098,11894,13063,40468,61823,
#Deleted in new
chr15_KI270905v1_alt	2368158	2381905	chr15_KI270905v1_alt:2368158-2381905	3	+	2368256	2378703	789624	19	146,120,60,81,39,48,85,110,87,108,88,257,69,76,92,101,98,156,3378,	0,1816,2828,3069,4003,4304,4440,4620,5785,5978,6281,6745,7257,8580,9087,9753,9936,10129,10369,
#Deleted in new
chr15_KI270905v1_alt	2376865	2377102	chr15_KI270905v1_alt:2376865-2377102	3	+	2376865	2376865	8553170	1	237,	0,
#Deleted in new
chr15_KI270905v1_alt	2397418	2397551	chr15_KI270905v1_alt:2397418-2397551	3	+	2397418	2397418	8553170	1	133,	0,
#Deleted in new
chr15_KI270905v1_alt	2428956	2429193	chr15_KI270905v1_alt:2428956-2429193	3	+	2428956	2428956	8553170	1	237,	0,
#Deleted in new
chr15_KI270905v1_alt	2495326	2495725	chr15_KI270905v1_alt:2495326-2495725	3	+	2495326	2495725	789624	1	399,	0,
#Deleted in new
chr15_KI270905v1_alt	2539359	2539466	chr15_KI270905v1_alt:2539359-2539466	3	-	2539359	2539359	8553170	1	107,	0,
#Deleted in new
chr15_KI270905v1_alt	2640377	2640482	chr15_KI270905v1_alt:2640377-2640482	3	+	2640377	2640377	8553170	1	105,	0,
#Deleted in new
chr15_KI270905v1_alt	2646213	2678539	chr15_KI270905v1_alt:2646213-2678539	1	-	2647267	2668225	789624	10	1573,110,87,195,168,80,47,64,125,410,	0,6179,9859,10908,11739,15697,19015,21979,25525,31916,
#Deleted in new
chr15_KI270905v1_alt	2646213	2678539	chr15_KI270905v1_alt:2646213-2678539	3	-	2647267	2658007	789624	9	1573,110,87,195,168,80,47,125,410,	0,6179,9859,10908,11739,15697,19015,25525,31916,
#Deleted in new
chr15_KI270905v1_alt	2647032	2678238	chr15_KI270905v1_alt:2647032-2678238	1	-	2647267	2658007	789624	11	754,110,87,195,168,80,47,174,64,125,109,	0,5360,9040,10089,10920,14878,18196,19544,21160,24706,31097,
#Deleted in new
chr15_KI270905v1_alt	2669834	2669967	chr15_KI270905v1_alt:2669834-2669967	3	-	2669834	2669834	8553170	1	133,	0,
#Deleted in new
chr15_KI270905v1_alt	2690198	2690489	chr15_KI270905v1_alt:2690198-2690489	3	-	2690198	2690198	8553170	1	291,	0,
#Deleted in new
chr15_KI270905v1_alt	2845610	2845901	chr15_KI270905v1_alt:2845610-2845901	3	+	2845610	2845610	8553170	1	291,	0,
#Deleted in new
chr15_KI270905v1_alt	2866124	2866257	chr15_KI270905v1_alt:2866124-2866257	3	+	2866124	2866124	8553170	1	133,	0,
#Deleted in new
chr15_KI270905v1_alt	2897663	2897900	chr15_KI270905v1_alt:2897663-2897900	3	+	2897663	2897663	8553170	1	237,	0,
#Deleted in new
chr15_KI270905v1_alt	2911146	2971326	chr15_KI270905v1_alt:2911146-2971326	3	+	2911767	2921172	789624	11	750,71,97,254,109,147,75,64,182,47,246,	0,4503,7884,8565,9475,9882,13139,19028,20501,22055,59934,
#Deleted in new
chr15_KI270905v1_alt	2959289	2959383	chr15_KI270905v1_alt:2959289-2959383	3	+	2959289	2959289	8553170	1	94,	0,
#Deleted in new
chr15_KI270905v1_alt	3085871	3086108	chr15_KI270905v1_alt:3085871-3086108	3	+	3085871	3085871	8553170	1	237,	0,
#Deleted in new
chr15_KI270905v1_alt	3189604	3228834	chr15_KI270905v1_alt:3189604-3228834	3	+	3190395	3222990	0	15	139,1386,141,202,234,132,109,120,165,151,104,195,129,141,1540,	0,639,4245,6741,9985,14291,16672,18362,21254,21916,24680,25330,26670,33248,37690,
#Deleted in new
chr15_KI270905v1_alt	3227198	3277258	chr15_KI270905v1_alt:3227198-3277258	3	-	3227198	3277258	789624	16	603,183,171,170,71,70,131,89,88,193,91,143,73,137,61,60,	0,1420,5664,6836,10500,12094,13295,17395,17566,19412,26468,32869,33486,35374,49330,50000,
#Deleted in new
chr15_KI270905v1_alt	3241978	3242081	chr15_KI270905v1_alt:3241978-3242081	3	-	3241978	3241978	8553170	1	103,	0,
#Deleted in new
chr15_KI270905v1_alt	3260728	3277258	chr15_KI270905v1_alt:3260728-3277258	1	-	3260728	3277258	789624	3	29,61,60,	0,15800,16470,
#Deleted in new
chr15_KI270905v1_alt	3286820	3447037	chr15_KI270905v1_alt:3286820-3447037	3	-	3287581	3446723	789624	27	2010,133,203,145,21,175,252,129,132,123,229,293,30,141,51,135,174,101,73,124,175,172,125,214,196,80,368,	0,25078,25854,27270,28309,29922,31626,34483,36648,36981,39055,40888,45142,46049,46827,48313,49347,59493,60391,61528,62067,65025,66012,66827,68977,75831,159849,
#Deleted in new
chr15_KI270905v1_alt	3286820	3387462	chr15_KI270905v1_alt:3286820-3387462	1	-	3287581	3367104	789624	28	2010,133,203,145,21,175,252,129,132,123,229,293,30,141,51,135,174,101,73,124,175,172,125,214,196,80,86,70,	0,25078,25854,27270,28309,29922,31626,34483,36648,36981,39055,40888,45142,46049,46827,48313,49347,59493,60391,61528,62067,65025,66012,66827,68977,75831,80281,100572,
#Deleted in new
chr15_KI270905v1_alt	3286820	3387462	chr15_KI270905v1_alt:3286820-3387462	1	-	3287581	3362668	789624	27	2010,133,203,145,21,175,252,129,132,123,229,293,30,141,51,135,174,101,73,124,175,172,125,214,196,80,70,	0,25078,25854,27270,28309,29922,31626,34483,36648,36981,39055,40888,45142,46049,46827,48313,49347,59493,60391,61528,62067,65025,66012,66827,68977,75831,100572,
#Deleted in new
chr15_KI270905v1_alt	3286820	3356259	chr15_KI270905v1_alt:3286820-3356259	1	-	3287581	3356259	789624	26	2010,133,203,145,21,175,252,129,132,123,229,293,30,141,51,135,174,101,73,124,175,172,125,214,196,17,	0,25078,25854,27270,28309,29922,31626,34483,36648,36981,39055,40888,45142,46049,46827,48313,49347,59493,60391,61528,62067,65025,66012,66827,68977,69422,
#Deleted in new
chr15_KI270905v1_alt	3287581	3353861	chr15_KI270905v1_alt:3287581-3353861	1	-	3348883	3353861	789624	23	1249,133,203,145,21,252,129,132,123,229,293,30,141,51,135,174,101,73,124,205,172,125,214,	0,24317,25093,26509,27548,30865,33722,35887,36220,38294,40127,44381,45288,46066,47552,48586,58732,59630,60767,61276,64264,65251,66066,
#Deleted in new
chr15_KI270905v1_alt	3612703	3663742	chr15_KI270905v1_alt:3612703-3663742	3	+	3613036	3658139	789624	2	910,5893,	0,45146,
#Deleted in new
chr15_KI270905v1_alt	3612990	3658283	chr15_KI270905v1_alt:3612990-3658283	1	+	3613036	3658139	789624	4	343,42,232,434,	0,347,391,44859,
#Deleted in new
chr15_KI270905v1_alt	4213444	4213576	chr15_KI270905v1_alt:4213444-4213576	3	+	4213444	4213444	8553170	1	132,	0,
#Deleted in new
chr15_KI270905v1_alt	4315610	4454253	chr15_KI270905v1_alt:4315610-4454253	3	+	4315714	4453795	789624	10	159,140,45,110,80,168,195,87,110,977,	0,407,70834,81320,123452,127336,128142,129299,132956,137666,
#Deleted in new
chr15_KI270905v1_alt	4460578	4460683	chr15_KI270905v1_alt:4460578-4460683	3	-	4460578	4460578	8553170	1	105,	0,
#Deleted in new
chr15_KI270905v1_alt	4569858	4569965	chr15_KI270905v1_alt:4569858-4569965	3	+	4569858	4569858	8553170	1	107,	0,
#Deleted in new
chr15_KI270905v1_alt	4816701	4816992	chr15_KI270905v1_alt:4816701-4816992	3	+	4816701	4816701	8553170	1	291,	0,
#Deleted in new
chr15_KI270905v1_alt	4829723	4854533	chr15_KI270905v1_alt:4829723-4854533	3	+	4839678	4852429	0	12	110,71,97,254,164,147,75,168,130,109,139,3693,	0,4964,8351,9032,9939,10346,13588,14455,17839,18793,20637,21117,
#Deleted in new
chr15_KI270905v1_alt	4830069	4854533	chr15_KI270905v1_alt:4830069-4854533	1	+	4839678	4852429	0	13	118,114,71,97,254,164,147,75,168,130,109,139,3693,	0,315,4618,8005,8686,9593,10000,13242,14109,17493,18447,20291,20771,
#Deleted in new
chr15_KI270905v1_alt	4830069	4854533	chr15_KI270905v1_alt:4830069-4854533	1	+	4830791	4852429	0	12	851,71,97,254,164,147,75,168,130,109,139,3693,	0,4618,8005,8686,9593,10000,13242,14109,17493,18447,20291,20771,
#Deleted in new
chr15_KI270905v1_alt	4856252	4911692	chr15_KI270905v1_alt:4856252-4911692	3	+	4858175	4911204	789624	6	110,233,150,113,54,584,	0,1916,38100,42892,50053,54856,
#Deleted in new
chr15_KI270905v1_alt	4932597	4949251	chr15_KI270905v1_alt:4932597-4949251	1	+	4945272	4945827	789624	2	158,3980,	0,12674,
#Deleted in new
chr15_KI270905v1_alt	4932597	4949251	chr15_KI270905v1_alt:4932597-4949251	3	+	4945272	4945827	789624	3	158,115,3742,	0,12674,12912,
#Deleted in new
chr15_KI270906v1_alt	1629	1697	chr15_KI270906v1_alt:1629-1697	0	-	1629	1697	789624	1	68,	0,
#Deleted in new
chr15_KI270906v1_alt	1629	4305	chr15_KI270906v1_alt:1629-4305	0	-	1629	4276	789624	3	109,54,175,	0,202,2501,
#Deleted in new
chr15_KI270906v1_alt	1629	4406	chr15_KI270906v1_alt:1629-4406	3	-	1629	4276	789624	3	109,54,276,	0,202,2501,
#Deleted in new
chr15_KI270906v1_alt	1629	4302	chr15_KI270906v1_alt:1629-4302	0	-	1629	4276	789624	3	109,54,172,	0,202,2501,
#Deleted in new
chr15_KI270906v1_alt	1629	1681	chr15_KI270906v1_alt:1629-1681	0	-	1629	1681	789624	1	52,	0,
#Deleted in new
chr15_KI270906v1_alt	52603	64912	chr15_KI270906v1_alt:52603-64912	5	+	52603	52603	16724991	8	78,41,73,46,181,100,158,117,	0,377,876,1656,5563,7638,9102,12192,
#Deleted in new
chr15_KI270906v1_alt	60233	90834	chr15_KI270906v1_alt:60233-90834	7	+	60233	60233	16724991	4	108,156,142,67,	0,1472,29525,30534,
#Deleted in new
chr15_KI270906v1_alt	97777	106332	chr15_KI270906v1_alt:97777-106332	3	-	98299	106241	789624	9	546,1203,142,59,107,94,51,129,289,	0,1202,3062,3534,4971,5173,5355,6491,8266,
#Deleted in new
chr15_KI270906v1_alt	110072	113932	chr15_KI270906v1_alt:110072-113932	7	-	110072	110072	16724991	4	67,141,384,76,	0,926,1724,3784,
#Deleted in new
chr15_KI270906v1_alt	126937	137259	chr15_KI270906v1_alt:126937-137259	7	+	126937	126937	16724991	19	84,120,60,81,39,48,85,110,90,108,88,257,69,86,92,101,101,158,182,	0,1783,2488,2731,3667,3979,4115,4295,5425,5621,5925,6401,6925,8362,8869,9529,9712,9897,10140,
#Deleted in new
chr15_KI270906v1_alt	127943	137857	chr15_KI270906v1_alt:127943-137857	5	+	127943	127943	16724991	18	58,120,60,81,360,85,110,87,108,88,257,69,76,92,101,101,153,780,	0,777,1482,1725,2661,3109,3289,4422,4615,4919,5395,5919,7356,7863,8523,8706,8896,9134,
#Deleted in new
chr15_KI270906v1_alt	135406	135696	chr15_KI270906v1_alt:135406-135696	3	+	135406	135406	8553170	1	290,	0,
#Deleted in new
chr15_KI270906v1_alt	149378	151559	chr15_KI270906v1_alt:149378-151559	7	+	149378	149378	16724991	1	2181,	0,
#Deleted in new
chr15_KI270906v1_alt	163000	163206	chr15_KI270906v1_alt:163000-163206	7	+	163000	163000	16724991	1	206,	0,
#Deleted in new
chr15_KI270906v1_alt	184680	184818	chr15_KI270906v1_alt:184680-184818	7	+	184680	184680	16724991	1	138,	0,
#Deleted in new
chr15_KI270906v1_alt	195385	195901	chr15_KI270906v1_alt:195385-195901	7	-	195385	195385	16724991	2	220,180,	0,336,
#Deleted in new
chr15_KQ031389v1_alt	32134	32976	chr15_KQ031389v1_alt:32134-32976	7	+	32134	32134	16724991	2	99,574,	0,268,
#Deleted in new
chr15_KQ031389v1_alt	40621	60748	chr15_KQ031389v1_alt:40621-60748	7	-	40621	40621	16724991	4	97,65,86,445,	0,15163,15431,19682,
#Deleted in new
chr15_KQ031389v1_alt	60303	60642	chr15_KQ031389v1_alt:60303-60642	5	-	60303	60303	16724991	1	339,	0,
#Deleted in new
chr15_KQ031389v1_alt	70731	81163	chr15_KQ031389v1_alt:70731-81163	1	+	70731	81163	789624	20	48,120,60,81,39,48,85,110,87,108,88,257,69,76,92,51,47,98,156,173,	0,1718,2730,2971,3905,4206,4342,4522,5695,5888,6191,6655,7167,8472,8979,9645,9697,9826,10019,10259,
#Deleted in new
chr15_KQ031389v1_alt	70731	81163	chr15_KQ031389v1_alt:70731-81163	3	+	70731	81163	789624	20	48,120,60,81,39,48,85,110,87,108,88,257,69,76,92,51,47,98,156,173,	0,1718,2730,2971,3905,4206,4342,4522,5695,5888,6191,6655,7167,8472,8979,9645,9697,9826,10019,10259,
#Deleted in new
chr15_KQ031389v1_alt	73373	81163	chr15_KQ031389v1_alt:73373-81163	1	+	73373	81163	789624	18	74,153,103,39,48,85,110,87,108,88,257,69,84,51,47,98,156,173,	0,108,307,1263,1564,1700,1880,3053,3246,3549,4013,4525,6774,7003,7055,7184,7377,7617,
#Deleted in new
chr15_KQ031389v1_alt	73373	81163	chr15_KQ031389v1_alt:73373-81163	1	+	73373	81163	789624	18	74,153,103,39,48,85,110,87,108,88,257,69,84,51,47,98,156,173,	0,108,307,1263,1564,1700,1880,3053,3246,3549,4013,4525,6774,7003,7055,7184,7377,7617,
#Deleted in new
chr15_KQ031389v1_alt	79330	79567	chr15_KQ031389v1_alt:79330-79567	3	+	79330	79330	8553170	1	237,	0,
#Deleted in new
chr15_KQ031389v1_alt	86492	89760	chr15_KQ031389v1_alt:86492-89760	7	-	86492	86492	16724991	3	61,240,173,	0,2110,3095,
#Deleted in new
chr15_KQ031389v1_alt	91392	118894	chr15_KQ031389v1_alt:91392-118894	5	+	91392	91392	16724991	4	289,125,79,100,	0,6575,23959,27402,
#Deleted in new
chr15_KQ031389v1_alt	91394	101694	chr15_KQ031389v1_alt:91394-101694	4	+	91394	91394	16724991	3	287,125,121,	0,6573,10179,
#Deleted in new
chr15_KQ031389v1_alt	91395	118877	chr15_KQ031389v1_alt:91395-118877	4	+	91395	91395	16724991	4	286,125,79,69,	0,6572,23956,27413,
#Deleted in new
chr15_KQ031389v1_alt	91404	119424	chr15_KQ031389v1_alt:91404-119424	7	+	91404	91404	16724991	5	277,125,47,79,630,	0,6563,13153,23947,27390,
#Deleted in new
chr15_KQ031389v1_alt	97967	115452	chr15_KQ031389v1_alt:97967-115452	5	+	97967	97967	16724991	5	74,44,174,47,101,	0,3626,5113,6590,17384,
#Deleted in new
chr15_KQ031389v1_alt	99863	99996	chr15_KQ031389v1_alt:99863-99996	3	+	99863	99863	8553170	1	133,	0,
#Deleted in new
chr15_KQ031389v1_alt	122719	136506	chr15_KQ031389v1_alt:122719-136506	1	+	122817	133245	789624	19	146,120,60,81,39,48,85,110,87,108,88,257,69,76,92,98,98,156,3437,	0,1815,2830,3071,4005,4306,4442,4622,5799,5992,6295,6759,7271,8564,9071,9737,9917,10110,10350,
#Deleted in new
chr15_KQ031389v1_alt	122719	136506	chr15_KQ031389v1_alt:122719-136506	3	+	122817	133245	8553170	19	146,120,60,81,39,48,85,110,87,108,88,257,69,76,92,98,98,156,3437,	0,1815,2830,3071,4005,4306,4442,4622,5799,5992,6295,6759,7271,8564,9071,9737,9917,10110,10350,
#Deleted in new
chr15_KQ031389v1_alt	125461	133242	chr15_KQ031389v1_alt:125461-133242	1	+	125461	133242	789624	17	74,153,103,39,48,85,110,87,108,88,257,69,84,98,98,156,173,	0,108,307,1263,1564,1700,1880,3057,3250,3553,4017,4529,6766,6995,7175,7368,7608,
#Deleted in new
chr15_KQ031389v1_alt	125461	133242	chr15_KQ031389v1_alt:125461-133242	1	+	125461	133242	789624	17	74,153,103,39,48,85,110,87,108,88,257,69,84,98,98,156,173,	0,108,307,1263,1564,1700,1880,3057,3250,3553,4017,4529,6766,6995,7175,7368,7608,
#Deleted in new
chr15_KQ031389v1_alt	131410	131647	chr15_KQ031389v1_alt:131410-131647	3	+	131410	131410	8553170	1	237,	0,
#Deleted in new
chr15_KQ031389v1_alt	138553	141084	chr15_KQ031389v1_alt:138553-141084	7	-	138553	138553	16724991	3	65,240,147,	0,1409,2384,
#Deleted in new
chr15_KQ031389v1_alt	141607	141785	chr15_KQ031389v1_alt:141607-141785	7	-	141607	141607	16724991	1	178,	0,
#Deleted in new
chr15_KQ031389v1_alt	211972	214520	chr15_KQ031389v1_alt:211972-214520	7	+	211972	211972	16724991	1	2548,	0,
#Deleted in new
chr15_KQ031389v1_alt	243377	243484	chr15_KQ031389v1_alt:243377-243484	3	-	243377	243377	8553170	1	107,	0,
#Deleted in new
chr15_KQ031389v1_alt	341612	345537	chr15_KQ031389v1_alt:341612-345537	3	-	341612	341612	8553170	1	3925,	0,
#Deleted in new
chr15_KQ031389v1_alt	352736	352841	chr15_KQ031389v1_alt:352736-352841	3	+	352736	352736	8553170	1	105,	0,
#Deleted in new
chr15_KQ031389v1_alt	359627	497696	chr15_KQ031389v1_alt:359627-497696	1	-	359627	497696	789624	11	516,110,87,195,168,80,110,33,12,140,55,	0,5117,8797,9846,10677,14650,56824,67374,111698,137626,138014,
#Deleted in new
chr15_KQ031389v1_alt	359627	497696	chr15_KQ031389v1_alt:359627-497696	3	-	359627	497696	789624	11	516,110,87,195,168,80,110,33,12,140,55,	0,5117,8797,9846,10677,14650,56824,67374,111698,137626,138014,
#Deleted in new
chr15_KQ031389v1_alt	1878442	1879175	chr15_KQ031389v1_alt:1878442-1879175	3	-	1878442	1878442	8553170	1	733,	0,
#Deleted in new
chr15_KQ031389v1_alt	1902788	1911566	chr15_KQ031389v1_alt:1902788-1911566	3	+	1902788	1902788	8553170	2	723,247,	0,8531,
#Deleted in new
chr15_KQ031389v1_alt	1910814	1911606	chr15_KQ031389v1_alt:1910814-1911606	3	-	1910814	1910814	8553170	1	792,	0,
#Deleted in new
chr15_KQ031389v1_alt	1915604	1915841	chr15_KQ031389v1_alt:1915604-1915841	3	-	1915604	1915604	8553170	1	237,	0,
#Deleted in new
chr15_KQ031389v1_alt	1917865	1918364	chr15_KQ031389v1_alt:1917865-1918364	3	+	1917865	1917865	8553170	1	499,	0,
#Deleted in new
chr15_KQ031389v1_alt	1925418	1953133	chr15_KQ031389v1_alt:1925418-1953133	7	-	1925418	1925418	16724991	4	546,79,125,48,	0,3916,21270,27667,
#Deleted in new
chr15_KQ031389v1_alt	1925958	1953337	chr15_KQ031389v1_alt:1925958-1953337	4	-	1925958	1925958	16724991	6	6,79,47,64,125,252,	0,3376,14215,17185,20730,27127,
#Deleted in new
chr15_KQ031389v1_alt	1929088	1953217	chr15_KQ031389v1_alt:1929088-1953217	4	-	1929088	1929088	16724991	3	325,125,132,	0,17600,23997,
#Deleted in new
chr15_KQ031389v1_alt	1929334	1946816	chr15_KQ031389v1_alt:1929334-1946816	5	-	1929334	1929334	16724991	5	79,47,174,64,128,	0,10839,12192,13809,17354,
#Deleted in new
chr15_KQ031389v1_alt	1941534	1953364	chr15_KQ031389v1_alt:1941534-1953364	5	-	1941534	1941534	16724991	4	166,64,125,279,	0,1609,5154,11551,
#Deleted in new
chr15_KQ031389v1_alt	1944784	1944917	chr15_KQ031389v1_alt:1944784-1944917	3	-	1944784	1944784	8553170	1	133,	0,
#Deleted in new
chr15_KQ031389v1_alt	1955011	1958279	chr15_KQ031389v1_alt:1955011-1958279	7	+	1955011	1955011	16724991	3	172,269,67,	0,917,3201,
#Deleted in new
chr15_KQ031389v1_alt	1963601	1974027	chr15_KQ031389v1_alt:1963601-1974027	3	-	1963601	1974027	789624	19	176,156,98,101,92,76,69,257,88,108,87,110,85,48,39,81,60,120,48,	0,261,512,692,1368,1891,3212,3536,4169,4452,4666,5803,6008,6181,6491,7381,7643,8592,10378,
#Deleted in new
chr15_KQ031389v1_alt	1965169	1965460	chr15_KQ031389v1_alt:1965169-1965460	3	-	1965169	1965169	8553170	1	291,	0,
#Deleted in new
chr15_KQ031389v1_alt	1966575	1967858	chr15_KQ031389v1_alt:1966575-1967858	0	-	1966575	1966575	8553170	3	307,257,88,	0,562,1195,
#Deleted in new
chr15_KQ031389v1_alt	1980137	1986014	chr15_KQ031389v1_alt:1980137-1986014	3	-	1980137	1980137	8553170	3	158,96,447,	0,1309,5430,
#Deleted in new
chr15_KQ031389v1_alt	2012397	2018739	chr15_KQ031389v1_alt:2012397-2018739	7	-	2012397	2012397	16724991	5	82,142,172,155,675,	0,926,4490,5156,5667,
#Deleted in new
chr15_KQ031389v1_alt	2105614	2105761	chr15_KQ031389v1_alt:2105614-2105761	7	+	2105614	2105614	16724991	1	147,	0,
#Deleted in new
chr15_KQ031389v1_alt	2111785	2125658	chr15_KQ031389v1_alt:2111785-2125658	1	+	2111883	2122327	789624	19	146,120,60,81,39,48,85,110,87,108,88,257,69,76,92,101,98,156,3507,	0,1812,2823,3064,3996,4297,4433,4613,5791,5984,6287,6751,7263,8576,9083,9749,9932,10125,10366,
#Deleted in new
chr15_KQ031389v1_alt	2111785	2125658	chr15_KQ031389v1_alt:2111785-2125658	3	+	2111883	2122327	789624	19	146,120,60,81,39,48,85,110,87,108,88,257,69,76,92,101,98,156,3507,	0,1812,2823,3064,3996,4297,4433,4613,5791,5984,6287,6751,7263,8576,9083,9749,9932,10125,10366,
#Deleted in new
chr15_KQ031389v1_alt	2114517	2122324	chr15_KQ031389v1_alt:2114517-2122324	1	+	2114517	2122324	789624	17	77,153,103,39,48,85,110,87,108,88,257,69,84,101,98,156,173,	0,111,310,1264,1565,1701,1881,3059,3252,3555,4019,4531,6788,7017,7200,7393,7634,
#Deleted in new
chr15_KQ031389v1_alt	2114517	2122324	chr15_KQ031389v1_alt:2114517-2122324	1	+	2114517	2122324	789624	17	77,153,103,39,48,85,110,87,108,88,257,69,84,101,98,156,173,	0,111,310,1264,1565,1701,1881,3059,3252,3555,4019,4531,6788,7017,7200,7393,7634,
#Deleted in new
chr15_KQ031389v1_alt	2120469	2120760	chr15_KQ031389v1_alt:2120469-2120760	3	+	2120469	2120469	8553170	1	291,	0,
#Deleted in new
chr15_KQ031389v1_alt	2134570	2154300	chr15_KQ031389v1_alt:2134570-2154300	1	+	2134570	2154300	0	11	129,71,97,254,164,147,75,168,46,109,159,	0,3893,7284,7965,8872,9279,12521,13388,16857,17727,19571,
#Deleted in new
chr15_KQ031389v1_alt	2134570	2154300	chr15_KQ031389v1_alt:2134570-2154300	3	+	2134570	2154300	789624	11	129,71,97,254,164,147,75,168,46,109,159,	0,3893,7284,7965,8872,9279,12521,13388,16857,17727,19571,
#Deleted in new
chr15_KQ031389v1_alt	2142468	2159979	chr15_KQ031389v1_alt:2142468-2159979	3	-	2142468	2142468	8553170	5	1275,128,251,453,121,	0,1361,2560,12915,17390,
#Deleted in new
chr15_KQ031389v1_alt	2160039	2215515	chr15_KQ031389v1_alt:2160039-2215515	1	+	2161958	2215026	789624	6	103,233,150,113,54,585,	0,1912,38137,42926,50088,54891,
#Deleted in new
chr15_KQ031389v1_alt	2160039	2215515	chr15_KQ031389v1_alt:2160039-2215515	3	+	2161958	2215026	789624	6	103,233,150,110,54,585,	0,1912,38137,42929,50088,54891,
#Deleted in new
chr15_KQ031389v1_alt	2160062	2215505	chr15_KQ031389v1_alt:2160062-2215505	1	+	2161958	2215026	789624	5	80,233,150,110,575,	0,1889,38114,42906,54868,
#Deleted in new
chr15_KQ031389v1_alt	2160065	2215306	chr15_KQ031389v1_alt:2160065-2215306	1	+	2161958	2215026	789624	5	77,233,150,113,376,	0,1886,38111,42900,54865,
#Deleted in new
chr15_KQ031389v1_alt	2161988	2210327	chr15_KQ031389v1_alt:2161988-2210327	0	+	2161988	2210319	789624	4	196,150,113,200,	0,36188,40977,48139,
#Deleted in new
chr15_KQ031389v1_alt	2174449	2187491	chr15_KQ031389v1_alt:2174449-2187491	3	-	2174449	2174449	8553170	3	195,144,93,	0,10288,12949,
#Deleted in new
chr15_KQ031389v1_alt	2184094	2191465	chr15_KQ031389v1_alt:2184094-2191465	1	-	2184094	2184094	789624	4	216,50,119,76,	0,737,3304,7295,
#Deleted in new
chr15_KQ031389v1_alt	2191454	2210181	chr15_KQ031389v1_alt:2191454-2210181	0	+	2191454	2191454	8553170	4	87,150,110,54,	0,6722,11514,18673,
#Deleted in new
chr15_KQ031389v1_alt	2195971	2215043	chr15_KQ031389v1_alt:2195971-2215043	0	+	2195971	2195971	8553170	5	185,150,110,54,113,	0,2205,6997,14156,18959,
#Deleted in new
chr15_KQ031389v1_alt	2202824	2210726	chr15_KQ031389v1_alt:2202824-2210726	0	+	2202824	2202824	8553170	2	254,599,	0,7303,
#Deleted in new
chr15_KQ031389v1_alt	2202848	2215513	chr15_KQ031389v1_alt:2202848-2215513	0	+	2202848	2202848	8553170	3	230,54,583,	0,7279,12082,
#Deleted in new
chr15_KQ031389v1_alt	2235683	2237421	chr15_KQ031389v1_alt:2235683-2237421	3	-	2235683	2235683	8553170	1	1738,	0,
#Deleted in new
chr15_KQ031389v1_alt	2236387	2263521	chr15_KQ031389v1_alt:2236387-2263521	3	+	2249104	2249659	0	2	188,14418,	0,12716,
#Deleted in new
chr15_KQ031389v1_alt	2236417	2251716	chr15_KQ031389v1_alt:2236417-2251716	1	+	2249104	2249659	0	3	158,115,2375,	0,12686,12924,
#Deleted in new
chr15_KQ031389v1_alt	2236417	2249689	chr15_KQ031389v1_alt:2236417-2249689	1	+	2249104	2249354	789624	3	158,105,360,	0,12686,12912,
#Deleted in new
chr15_KQ031389v1_alt	2236514	2237268	chr15_KQ031389v1_alt:2236514-2237268	1	-	2236514	2236514	789624	2	264,310,	0,444,
#Deleted in new
chr15_KQ031389v1_alt	2355396	2355740	chr15_KQ031389v1_alt:2355396-2355740	7	-	2355396	2355396	16724991	1	344,	0,
#Deleted in new
chr16	11554	14090	chr16:11554-14090	7	+	11554	11554	16724991	3	354,109,1189,	0,739,1347,
#Deleted in new
chr16	11860	13351	chr16:11860-13351	5	+	11860	11860	16724991	5	48,85,71,171,196,	0,433,802,1045,1295,
#Deleted in new
chr16	14380	18068	chr16:14380-18068	7	-	14380	14380	16724991	9	131,69,153,159,202,136,137,147,112,	0,271,1100,1909,2156,2535,2910,3223,3576,
#Deleted in new
chr16	17051	17119	chr16:17051-17119	3	-	17051	17051	5263520	1	68,	0,
#Partially deleted in new
chr16	17513	35195	chr16:17513-35195	3	-	17513	17513	8553170	4	237,102,85,349,	0,443,14285,17333,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	22909	25123	chr16:22909-25123	3	+	22909	22909	789624	2	176,878,	0,1336,
#Partially deleted in new
chr16	29335	38321	chr16:29335-38321	7	-	29335	29335	16724991	9	597,85,106,202,146,177,112,137,112,	0,2463,3898,4690,5511,6203,6496,7038,8874,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	46406	53628	chr16:46406-53628	3	-	47429	53586	789624	3	1151,88,153,	0,5151,7069,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	47235	52142	chr16:47235-52142	0	-	47235	47235	8553170	2	322,585,	0,4322,
#Partially deleted in new
chr16	53009	57669	chr16:53009-57669	0	+	54016	57143	789624	5	1049,91,106,75,584,	0,2449,2767,3529,4076,
#Partially deleted in new
chr16	53828	57668	chr16:53828-57668	3	+	53989	57143	789624	5	230,91,106,75,583,	0,1630,1948,2710,3257,
#Partially deleted in new
chr16	53886	57372	chr16:53886-57372	0	+	54016	56360	789624	6	172,91,106,100,75,287,	0,1572,1890,2434,2652,3199,
#Partially deleted in new
chr16	53898	56613	chr16:53898-56613	0	+	54016	56613	789624	4	160,84,89,75,	0,1560,1895,2640,
#Partially deleted in new
chr16	53898	55871	chr16:53898-55871	0	+	53898	53898	8553170	3	160,91,78,	0,1560,1895,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	54959	57444	chr16:54959-57444	0	+	54959	54959	8553170	4	590,106,75,359,	0,817,1579,2126,
#Deleted in new
chr16	55494	57453	chr16:55494-57453	0	+	55494	55494	8553170	3	55,837,368,	0,282,1591,
#Partially deleted in new
chr16	58058	72631	chr16:58058-72631	3	-	58339	65015	789624	18	701,154,101,76,95,64,101,162,75,112,255,158,123,210,214,131,141,119,	0,915,1190,1360,1673,2157,2380,3061,3326,3526,3739,4479,4716,4914,5528,6640,6840,14454,
#Deleted in new
chr16	58061	65039	chr16:58061-65039	0	-	62883	65015	789624	17	698,154,101,76,95,64,101,162,75,112,255,158,123,91,214,131,141,	0,912,1187,1357,1670,2154,2377,3058,3323,3523,3736,4476,4713,4911,5525,6637,6837,
#Deleted in new
chr16	58136	59762	chr16:58136-59762	0	-	58339	59762	789624	5	623,120,51,76,31,	0,837,1162,1282,1595,
#Deleted in new
chr16	58973	60193	chr16:58973-60193	0	-	58973	58973	8553170	3	376,76,462,	0,445,758,
#Deleted in new
chr16	59232	60680	chr16:59232-60680	0	-	59232	59232	8553170	4	262,367,64,242,	0,499,983,1206,
#Deleted in new
chr16	61424	62206	chr16:61424-62206	0	-	61424	61424	8553170	3	35,112,409,	0,160,373,
#Deleted in new
chr16	62972	65037	chr16:62972-65037	0	-	63903	65015	789624	4	210,336,131,139,	0,614,1726,1926,
#Partially deleted in new
chr16	63036	72621	chr16:63036-72621	0	-	63036	63036	8553170	3	146,1453,109,	0,550,9476,
#Partially deleted in new
chr16	63156	76355	chr16:63156-76355	0	-	63156	65015	789624	5	26,214,131,141,103,	0,430,1542,1742,13096,
#Deleted in new
chr16	63742	65039	chr16:63742-65039	0	-	63742	65015	789624	4	58,105,131,141,	0,590,956,1156,
#Partially deleted in new
chr16	64551	76341	chr16:64551-76341	0	-	64551	64551	8553170	2	488,89,	0,11701,
#Partially deleted in new
chr16	77006	85684	chr16:77006-85684	0	+	79436	85684	789624	4	119,276,205,284,	0,2418,6045,8394,
#Partially deleted in new
chr16	77018	85851	chr16:77018-85851	1	+	79436	85777	0	4	107,276,205,451,	0,2406,6033,8382,
#Partially deleted in new
chr16	78062	85853	chr16:78062-85853	0	+	78309	85777	0	4	271,276,205,453,	0,1362,4989,7338,
#Deleted in new
chr16	78243	79844	chr16:78243-79844	0	+	78243	78243	8553170	2	90,420,	0,1181,
#Partially deleted in new
chr16	78256	85842	chr16:78256-85842	3	+	79292	85777	0	5	77,193,276,205,442,	0,882,1168,4795,7144,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	84270	91086	chr16:84270-91086	0	-	84270	84270	8553170	3	325,203,2389,	0,2397,4427,
#Partially deleted in new
chr16	84273	138860	chr16:84273-138860	3	-	86704	138267	0	15	322,1051,193,190,130,107,157,138,82,154,75,130,70,185,219,	0,1546,4424,5439,8322,8945,13871,16098,26251,28348,33027,34852,46248,53876,54368,
#Partially deleted in new
chr16	85385	138349	chr16:85385-138349	0	-	117329	138267	789624	12	1485,193,190,130,107,157,138,82,154,75,70,200,	0,3312,4327,7210,7833,12759,14986,25139,27236,31915,45136,52764,
#Partially deleted in new
chr16	85800	138512	chr16:85800-138512	1	-	86704	138267	789624	12	1070,193,190,130,107,157,138,82,154,130,70,363,	0,2897,3912,6795,7418,12344,14571,24724,26821,33325,44721,52349,
#Partially deleted in new
chr16	85800	138670	chr16:85800-138670	0	-	112753	138267	789624	11	1070,193,190,130,107,157,138,82,154,70,521,	0,2897,3912,6795,7418,12344,14571,24724,26821,44721,52349,
#Partially deleted in new
chr16	85819	138860	chr16:85819-138860	1	-	86704	138267	0	14	1051,193,190,130,107,157,138,82,154,75,130,70,185,219,	0,2878,3893,6776,7399,12325,14552,24705,26802,31481,33306,44702,52330,52822,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	90630	91102	chr16:90630-91102	3	+	90630	90630	8553170	1	472,	0,
#Partially deleted in new
chr16	92790	98160	chr16:92790-98160	0	-	92790	92790	8553170	2	535,16,	0,5354,
#Partially deleted in new
chr16	93258	119405	chr16:93258-119405	0	-	93258	93258	8553170	8	67,157,138,82,154,75,130,52,	0,4886,7113,17266,19363,24042,25867,26095,
#Partially deleted in new
chr16	98144	138361	chr16:98144-138361	0	-	119184	138267	789624	8	157,138,82,154,75,130,70,130,	0,2227,12380,14477,19156,20981,32377,40087,
#Partially deleted in new
chr16	98144	138345	chr16:98144-138345	0	-	119184	138267	789624	7	157,138,82,154,75,130,196,	0,2227,12380,14477,19156,20981,40005,
#Partially deleted in new
chr16	98211	138361	chr16:98211-138361	0	-	100489	138267	789624	4	90,138,154,130,	0,2160,14410,40020,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	98229	138666	chr16:98229-138666	0	-	98229	119209	789624	10	72,138,82,154,75,130,39,137,70,25,	0,2142,12295,14392,19071,20896,25277,26707,32292,40412,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	110524	138677	chr16:110524-138677	0	-	125000	138267	789624	7	82,154,130,137,70,185,36,	0,2097,8601,14412,19997,27625,28117,
#Partially deleted in new
chr16	112659	138335	chr16:112659-138335	0	-	112659	138267	789624	6	116,75,130,39,70,186,	0,4641,6466,10847,17862,25490,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	125736	127219	chr16:125736-127219	3	+	125736	125736	8553170	2	588,213,	0,1270,
#Deleted in new
chr16	152686	154503	chr16:152686-154503	3	+	152909	154400	0	3	318,205,232,	0,1205,1585,
#Partially deleted in new
chr16	153891	166761	chr16:153891-166761	0	+	153891	153891	8553170	3	205,205,182,	0,12376,12688,
#Deleted in new
chr16	163121	165156	chr16:163121-165156	7	+	163121	163121	16724991	3	95,205,129,	0,1360,1906,
#Deleted in new
chr16	164481	166761	chr16:164481-166761	0	+	164481	164481	8553170	3	205,205,182,	0,1786,2098,
#Deleted in new
chr16	165977	166768	chr16:165977-166768	3	+	165997	166708	789624	3	112,205,189,	0,290,602,
#Deleted in new
chr16	168678	169334	chr16:168678-169334	7	+	168678	168678	16724991	3	95,165,112,	0,242,544,
#Deleted in new
chr16	172875	173710	chr16:172875-173710	3	+	172912	173600	0	3	132,205,239,	0,249,596,
#Deleted in new
chr16	172889	173710	chr16:172889-173710	1	+	173125	173600	789624	3	69,205,239,	0,235,582,
#Deleted in new
chr16	172893	173675	chr16:172893-173675	0	+	172893	172893	8553170	2	436,204,	0,578,
#Deleted in new
chr16	172943	173463	chr16:172943-173463	0	+	172943	173463	789624	2	64,339,	0,181,
#Deleted in new
chr16	176679	177522	chr16:176679-177522	3	+	176716	177411	0	3	132,205,240,	0,249,603,
#Deleted in new
chr16	176697	177520	chr16:176697-177520	0	+	176697	176697	8553170	2	436,238,	0,585,
#Deleted in new
chr16	176703	177522	chr16:176703-177522	1	+	176929	177411	789624	3	59,205,240,	0,225,579,
#Deleted in new
chr16	176747	177274	chr16:176747-177274	0	+	176747	176747	8553170	2	64,346,	0,181,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	178553	178656	chr16:178553-178656	3	+	178553	178553	8553170	1	103,	0,
#Deleted in new
chr16	180452	181181	chr16:180452-181181	3	+	180486	181108	789624	3	129,205,202,	0,213,527,
#Deleted in new
chr16	185747	186294	chr16:185747-186294	3	-	185747	185747	8553170	1	547,	0,
#Partially deleted in new
chr16	188968	229450	chr16:188968-229450	3	-	189197	229339	789624	10	371,168,30,89,177,144,111,99,95,172,	0,999,1572,3958,10093,17035,19109,31680,38273,40310,
#Partially deleted in new
chr16	188968	229463	chr16:188968-229463	1	-	189963	229339	789624	9	1167,30,89,177,144,111,99,95,185,	0,1572,3958,10093,17035,19109,31680,38273,40310,
#Partially deleted in new
chr16	188968	229439	chr16:188968-229439	0	-	229210	229339	789624	10	371,168,30,89,177,144,111,99,95,1453,	0,999,1572,3958,10093,17035,19109,31680,38273,39018,
#Partially deleted in new
chr16	188970	229463	chr16:188970-229463	1	-	189963	229339	789624	10	369,205,30,89,177,144,111,99,95,185,	0,960,1570,3956,10091,17033,19107,31678,38271,40308,
#Partially deleted in new
chr16	188974	229450	chr16:188974-229450	1	-	227299	229339	789624	11	365,168,30,89,177,144,111,99,95,70,172,	0,993,1566,3952,10087,17029,19103,31674,38267,39358,40304,
#Partially deleted in new
chr16	188989	206087	chr16:188989-206087	0	-	189197	206087	789624	5	350,168,30,89,84,	0,978,1551,3937,17014,
#Partially deleted in new
chr16	188989	190595	chr16:188989-190595	0	-	188989	188989	8553170	3	350,168,55,	0,978,1551,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	189097	209773	chr16:189097-209773	0	-	189097	189097	8553170	8	242,168,30,89,177,144,111,1173,	0,870,1443,3829,9964,16906,18980,19503,
#Partially deleted in new
chr16	189114	190549	chr16:189114-190549	0	-	189963	190549	789624	3	225,189,9,	0,832,1426,
#Partially deleted in new
chr16	189895	227686	chr16:189895-227686	1	-	189963	220744	789624	8	240,30,89,177,144,111,99,445,	0,645,3031,9166,16108,18182,30753,37346,
#Partially deleted in new
chr16	189895	229434	chr16:189895-229434	0	-	227299	229339	789624	10	240,30,89,177,144,111,99,95,70,156,	0,645,3031,9166,16108,18182,30753,37346,38437,39383,
#Partially deleted in new
chr16	190000	208508	chr16:190000-208508	0	-	190000	190000	8553170	6	135,30,89,177,144,431,	0,540,2926,9061,16003,18077,
#Partially deleted in new
chr16	190121	229374	chr16:190121-229374	0	-	227299	229339	789624	11	14,30,89,177,144,111,64,99,95,70,96,	0,419,2805,8940,15882,17956,18479,30527,37120,38211,39157,
#Partially deleted in new
chr16	190540	229422	chr16:190540-229422	0	-	190540	208185	789624	6	30,89,177,144,111,144,	0,2386,8521,15463,17537,38738,
#Partially deleted in new
chr16	206003	227656	chr16:206003-227656	0	-	206003	208185	789624	5	144,111,64,99,415,	0,2074,2597,14645,21238,
#Partially deleted in new
chr16	208632	229142	chr16:208632-229142	0	-	208632	208632	8553170	4	32,99,95,442,	0,12016,18609,20068,
#Partially deleted in new
chr16	220170	227614	chr16:220170-227614	0	-	220170	220170	8553170	2	577,373,	0,7071,
#Partially deleted in new
chr16	220648	228722	chr16:220648-228722	0	-	220648	220744	789624	4	99,95,70,234,	0,6593,7684,7840,
#Deleted in new
chr16	228123	228990	chr16:228123-228990	0	-	228123	228123	8553170	2	279,290,	0,577,
#Deleted in new
chr16	228228	229340	chr16:228228-229340	0	-	228228	228228	8553170	2	174,551,	0,561,
#Deleted in new
chr16	231133	231472	chr16:231133-231472	7	+	231133	231133	16724991	1	339,	0,
#Partially deleted in new
chr16	234545	266125	chr16:234545-266125	3	+	254413	265022	789624	13	312,106,301,117,192,131,133,130,141,76,156,103,1315,	0,15003,19835,24937,25423,26838,27547,27878,28716,29154,29470,30068,30265,
#Partially deleted in new
chr16	234801	268971	chr16:234801-268971	1	+	254413	268853	789624	14	56,106,301,117,192,131,133,130,141,76,156,103,98,196,	0,14747,19579,24681,25167,26582,27291,27622,28460,28898,29214,29812,30009,33974,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	234817	259521	chr16:234817-259521	0	+	254413	259521	789624	5	40,106,97,301,39,	0,14731,19015,19563,24665,
#Partially deleted in new
chr16	234826	254565	chr16:234826-254565	0	+	254413	254565	789624	3	31,106,237,	0,14722,19502,
#Partially deleted in new
chr16	234828	260003	chr16:234828-260003	0	+	254413	260003	789624	5	29,106,294,117,8,	0,14720,19559,24654,25167,
#Partially deleted in new
chr16	234829	254674	chr16:234829-254674	0	+	254413	254674	789624	3	28,110,294,	0,14719,19551,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	234833	261514	chr16:234833-261514	0	+	254413	261514	789624	7	24,113,106,301,117,192,131,	0,12123,14715,19547,24649,25135,26550,
#Partially deleted in new
chr16	234837	262139	chr16:234837-262139	0	+	254413	262139	789624	7	20,106,301,117,165,131,47,	0,14711,19543,24645,25158,26546,27255,
#Partially deleted in new
chr16	234843	261505	chr16:234843-261505	0	+	254413	261505	789624	7	14,154,106,301,117,192,122,	0,13400,14705,19537,24639,25125,26540,
#Partially deleted in new
chr16	234845	266120	chr16:234845-266120	1	+	254413	265022	789624	13	12,106,294,117,192,131,133,130,141,76,156,103,1310,	0,14703,19542,24637,25123,26538,27247,27578,28416,28854,29170,29768,29965,
#Partially deleted in new
chr16	234846	260009	chr16:234846-260009	0	+	254413	260009	789624	4	11,106,301,41,	0,14702,19534,25122,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	240187	254619	chr16:240187-254619	0	+	254413	254619	789624	4	89,106,97,291,	0,9361,13645,14141,
#Partially deleted in new
chr16	249546	269943	chr16:249546-269943	3	+	254413	268924	789624	13	108,301,117,192,131,133,130,141,76,156,103,230,424,	0,4834,9936,10422,11837,12546,12877,13715,14153,14469,15067,19229,19973,
#Partially deleted in new
chr16	254121	259520	chr16:254121-259520	0	+	254121	254121	8553170	2	560,38,	0,5361,
#Partially deleted in new
chr16	254627	260788	chr16:254627-260788	0	+	254627	260753	789624	4	54,117,192,376,	0,4855,5341,5785,
#Deleted in new
chr16	261204	262244	chr16:261204-262244	0	+	261204	261204	8553170	2	310,152,	0,888,
#Partially deleted in new
chr16	262507	265090	chr16:262507-265090	0	+	262507	265022	789624	5	46,141,76,103,280,	0,754,1192,2106,2303,
#Partially deleted in new
chr16	268300	275940	chr16:268300-275940	0	-	274046	275498	789624	15	1083,83,139,88,116,114,62,30,82,77,59,52,51,97,103,	0,1202,2222,2443,2683,2901,3098,3239,5174,5459,5742,5913,6982,7101,7537,
#Partially deleted in new
chr16	268300	275929	chr16:268300-275929	1	-	269268	275911	789624	17	1083,83,139,88,116,114,62,30,69,82,77,59,52,107,51,97,81,	0,1202,2222,2443,2683,2901,3098,3239,4562,5174,5459,5742,5913,6675,6982,7101,7548,
#Partially deleted in new
chr16	268310	275914	chr16:268310-275914	3	-	269268	275498	789624	17	1073,83,139,88,116,114,62,30,69,82,77,59,52,107,51,97,77,	0,1192,2212,2433,2673,2891,3088,3229,4552,5164,5449,5732,5903,6665,6972,7091,7527,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	268318	274956	chr16:268318-274956	0	-	268318	268318	8553170	9	1065,83,139,88,116,1730,82,77,914,	0,1184,2204,2425,2665,2883,5156,5441,5724,
#Partially deleted in new
chr16	268726	282084	chr16:268726-282084	0	+	268836	282084	789624	2	279,60,	0,13298,
#Partially deleted in new
chr16	268726	282084	chr16:268726-282084	0	+	268836	282084	789624	3	279,180,60,	0,13019,13298,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	268981	272183	chr16:268981-272183	0	+	268981	268981	8553170	2	24,302,	0,2900,
#Partially deleted in new
chr16	269268	275911	chr16:269268-275911	1	-	269268	275911	789624	16	115,83,139,88,116,114,62,30,69,82,77,59,126,51,97,63,	0,234,1254,1475,1715,1933,2130,2271,3594,4206,4491,4774,5688,6014,6133,6580,
#Partially deleted in new
chr16	270646	274273	chr16:270646-274273	0	-	270646	270646	8553170	11	15,88,116,114,62,30,69,82,77,59,60,	0,97,337,555,752,893,2216,2828,3113,3396,3567,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	271826	275980	chr16:271826-275980	0	-	271826	271826	8553170	9	668,69,82,77,59,869,51,97,132,	0,1036,1648,1933,2216,2387,3456,3575,4022,
#Deleted in new
chr16	274938	275567	chr16:274938-275567	0	-	274938	274938	8553170	3	144,51,166,	0,344,463,
#Deleted in new
chr16	280449	282688	chr16:280449-282688	0	+	280680	282688	789624	6	304,180,84,59,64,74,	0,1296,1575,1847,2017,2165,
#Deleted in new
chr16	280605	283010	chr16:280605-283010	3	+	280680	282814	789624	6	148,180,84,77,64,396,	0,1140,1419,1691,1861,2009,
#Deleted in new
chr16	280854	282810	chr16:280854-282810	0	+	282095	282810	789624	6	79,180,84,77,64,196,	0,891,1170,1442,1612,1760,
#Deleted in new
chr16	281081	282840	chr16:281081-282840	0	+	281081	281081	8553170	5	844,61,77,64,226,	0,966,1215,1385,1533,
#Partially deleted in new
chr16	283151	287215	chr16:283151-287215	3	+	283169	287113	789624	11	217,207,134,138,117,126,198,121,182,111,147,	0,1235,1507,1726,1932,2160,2354,3201,3402,3683,3917,
#Partially deleted in new
chr16	283163	287214	chr16:283163-287214	0	+	283163	283163	8553170	10	205,406,138,117,126,198,121,182,111,146,	0,1223,1714,1920,2148,2342,3189,3390,3671,3905,
#Partially deleted in new
chr16	283164	287114	chr16:283164-287114	1	+	283169	287113	789624	11	204,207,134,129,117,126,198,121,182,111,46,	0,1222,1494,1722,1919,2147,2341,3188,3389,3670,3904,
#Partially deleted in new
chr16	283179	285140	chr16:283179-285140	0	+	283179	285140	789624	5	189,207,134,93,57,	0,1207,1479,1743,1904,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	284151	287208	chr16:284151-287208	0	+	284151	284151	8553170	7	442,134,826,121,182,111,140,	0,507,726,2201,2402,2683,2917,
#Deleted in new
chr16	284874	285576	chr16:284874-285576	0	+	284874	284874	8553170	4	141,117,122,71,	0,209,437,631,
#Deleted in new
chr16	285679	287215	chr16:285679-287215	0	+	285679	287113	789624	5	24,103,182,111,147,	0,691,874,1155,1389,
#Partially deleted in new
chr16	287439	352659	chr16:287439-352659	3	-	288121	347025	0	11	809,168,108,231,171,530,138,97,141,959,291,	0,2000,3750,6048,9616,10282,16864,22533,27103,58708,64929,
#Partially deleted in new
chr16	287439	346322	chr16:287439-346322	0	-	287439	287439	8553170	8	809,4279,171,530,138,97,141,175,	0,2000,9616,10282,16864,22533,27103,58708,
#Partially deleted in new
chr16	287440	352449	chr16:287440-352449	1	-	288121	347025	0	10	808,168,231,171,530,138,97,141,959,81,	0,1999,6047,9615,10281,16863,22532,27102,58707,64928,
#Partially deleted in new
chr16	288189	293536	chr16:288189-293536	0	-	288215	293536	789624	3	117,168,49,	0,1250,5298,
#Partially deleted in new
chr16	297843	352673	chr16:297843-352673	0	-	297843	297843	8553170	5	408,138,97,141,305,	0,6460,12129,16699,54525,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	366968	371289	chr16:366968-371289	3	-	367674	370218	8553170	6	814,87,135,153,295,223,	0,1359,1532,2099,2962,4098,
#Deleted in new
chr16	367383	370527	chr16:367383-370527	1	-	367674	370218	0	6	399,87,135,153,295,29,	0,944,1117,1684,2547,3115,
#Deleted in new
chr16	367383	370509	chr16:367383-370509	0	-	367383	367383	8553170	5	399,87,720,295,11,	0,944,1117,2547,3115,
#Deleted in new
chr16	367393	370526	chr16:367393-370526	0	-	367393	367393	8553170	4	389,87,1725,28,	0,934,1107,3105,
#Deleted in new
chr16	367395	369803	chr16:367395-369803	1	-	367409	369654	789624	2	100,210,	0,2198,
#Deleted in new
chr16	367397	370225	chr16:367397-370225	0	-	367397	367397	8553170	4	385,87,711,295,	0,930,1103,2533,
#Deleted in new
chr16	367426	370234	chr16:367426-370234	0	-	367426	367426	8553170	4	356,87,720,304,	0,901,1074,2504,
#Deleted in new
chr16	367612	370509	chr16:367612-370509	1	-	367674	370218	0	6	170,87,135,153,295,25,	0,715,888,1455,2318,2872,
#Deleted in new
chr16	367723	370432	chr16:367723-370432	0	-	367723	370218	789624	6	59,87,135,153,295,71,	0,604,777,1344,2207,2638,
#Deleted in new
chr16	368334	370502	chr16:368334-370502	0	-	368334	370218	789624	5	80,135,153,295,59,	0,166,733,1596,2109,
#Deleted in new
chr16	368407	370338	chr16:368407-370338	0	-	368407	370218	789624	5	7,135,153,295,29,	0,93,660,1523,1902,
#Partially deleted in new
chr16	370772	381982	chr16:370772-381982	3	-	371986	381821	789624	13	1511,117,147,179,137,124,91,320,269,128,208,178,282,	0,1838,3232,3448,3983,4360,4572,5363,5771,6264,6605,6898,10928,
#Partially deleted in new
chr16	371861	374851	chr16:371861-374851	0	-	371986	374851	789624	4	422,147,179,96,	0,2143,2359,2894,
#Partially deleted in new
chr16	371863	381978	chr16:371863-381978	1	-	371986	377092	789624	13	420,117,147,179,137,124,91,320,269,128,208,135,71,	0,747,2141,2357,2892,3269,3481,4272,4680,5173,5514,5807,10044,
#Partially deleted in new
chr16	372415	375215	chr16:372415-375215	0	-	372541	375215	789624	5	312,147,179,137,83,	0,1589,1805,2340,2717,
#Deleted in new
chr16	374004	375075	chr16:374004-375075	0	-	374004	374004	8553170	3	147,179,320,	0,216,751,
#Partially deleted in new
chr16	374808	376475	chr16:374808-376475	0	-	374808	374808	8553170	4	84,124,91,340,	0,324,536,1327,
#Partially deleted in new
chr16	376805	386999	chr16:376805-386999	0	-	376805	377092	789624	5	7,128,208,141,103,	0,231,572,7450,10091,
#Partially deleted in new
chr16	377107	387113	chr16:377107-387113	0	-	377107	377107	8553170	5	57,208,178,141,217,	0,270,563,7148,9789,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	382096	392960	chr16:382096-392960	7	+	382096	382096	16724991	3	381,140,1194,	0,1193,9670,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	382149	387242	chr16:382149-387242	4	+	382149	382149	16724991	3	328,140,576,	0,1140,4517,
#Deleted in new
chr16	386762	387233	chr16:386762-387233	5	+	386762	386762	16724991	1	471,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	396724	400746	chr16:396724-400746	1	+	399108	400342	0	5	355,134,102,113,528,	0,2265,2654,2902,3494,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	396768	399474	chr16:396768-399474	0	+	399108	399474	789624	4	311,178,134,96,	0,1439,2221,2610,
#Partially deleted in new
chr16	397191	400753	chr16:397191-400753	1	+	399108	400342	0	6	122,187,134,102,113,535,	0,1016,1798,2187,2435,3027,
#Partially deleted in new
chr16	397191	400753	chr16:397191-400753	1	+	397222	400342	789624	4	122,134,113,535,	0,1798,2435,3027,
#Partially deleted in new
chr16	397198	400734	chr16:397198-400734	0	+	397222	398251	789624	6	115,187,134,102,113,516,	0,1009,1791,2180,2428,3020,
#Partially deleted in new
chr16	397207	400633	chr16:397207-400633	0	+	397207	397207	8553170	5	106,916,102,113,415,	0,1000,2171,2419,3011,
#Partially deleted in new
chr16	397208	400759	chr16:397208-400759	3	+	397222	400342	0	5	105,134,102,113,541,	0,1781,2170,2418,3010,
#Partially deleted in new
chr16	397208	400506	chr16:397208-400506	1	+	397222	400342	789624	6	105,24,134,102,113,288,	0,670,1781,2170,2418,3010,
#Partially deleted in new
chr16	397236	400648	chr16:397236-400648	0	+	397236	400190	789624	5	77,134,102,113,540,	0,1753,2142,2390,2872,
#Partially deleted in new
chr16	397741	400416	chr16:397741-400416	1	+	399108	400342	0	5	438,134,102,113,198,	0,1248,1637,1885,2477,
#Partially deleted in new
chr16	398409	400749	chr16:398409-400749	0	+	398409	398409	8553170	2	1330,531,	0,1809,
#Partially deleted in new
chr16	401825	412487	chr16:401825-412487	3	+	401963	411578	0	9	218,69,52,136,125,94,105,218,598,	0,3130,4520,5599,8417,8865,9146,9535,10064,
#Partially deleted in new
chr16	401881	411976	chr16:401881-411976	1	+	401963	411578	789624	9	162,69,16,136,125,94,105,218,87,	0,3074,4464,5543,8361,8809,9090,9479,10008,
#Partially deleted in new
chr16	401882	410306	chr16:401882-410306	0	+	401963	410306	789624	5	161,69,79,136,64,	0,3073,3263,5542,8360,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	401884	407069	chr16:401884-407069	0	+	401963	406783	789624	5	159,69,52,98,180,	0,3071,4461,4851,5005,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	401892	412370	chr16:401892-412370	0	+	401963	410354	0	10	151,69,153,52,136,159,94,105,218,481,	0,3063,3620,4453,5532,8316,8798,9079,9468,9997,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	401914	412487	chr16:401914-412487	0	+	401963	406729	789624	11	129,69,52,149,63,136,125,94,105,218,598,	0,3041,4431,4770,4975,5510,8328,8776,9057,9446,9975,
#Partially deleted in new
chr16	401916	411076	chr16:401916-411076	0	+	401963	411076	789624	7	127,69,52,156,159,94,105,	0,3039,4429,5508,8292,8774,9055,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	401925	411471	chr16:401925-411471	0	+	401963	406729	789624	9	118,69,52,268,136,125,94,105,111,	0,3030,4420,4759,5499,8317,8765,9046,9435,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	401960	407531	chr16:401960-407531	0	+	401963	406729	789624	5	83,69,52,205,152,	0,2995,4385,4724,5419,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	402004	407171	chr16:402004-407171	0	+	402004	402004	8553170	4	39,69,488,282,	0,2951,4341,4885,
#Partially deleted in new
chr16	406894	412487	chr16:406894-412487	0	+	406894	406894	8553170	5	58,162,94,105,598,	0,3348,3796,4077,4995,
#Partially deleted in new
chr16	406945	410295	chr16:406945-410295	0	+	406945	406945	8553170	2	615,87,	0,3263,
#Partially deleted in new
chr16	407426	411928	chr16:407426-411928	0	+	407426	410391	789624	6	134,162,63,105,218,39,	0,2816,3264,3545,3934,4463,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	409598	412481	chr16:409598-412481	0	+	409598	409598	8553170	4	769,94,607,592,	0,1092,1373,2291,
#Deleted in new
chr16	410111	411050	chr16:410111-411050	0	+	410111	410111	8553170	2	256,360,	0,579,
#Deleted in new
chr16	424242	424543	chr16:424242-424543	3	-	424242	424242	8553170	1	301,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	425618	523011	chr16:425618-523011	3	+	426006	520839	0	14	1102,94,95,212,150,36,94,104,141,82,138,156,141,2286,	0,35785,45676,56906,63232,71205,77385,79905,85041,93324,94135,94503,94840,95107,
#Partially deleted in new
chr16	426378	522355	chr16:426378-522355	0	+	426378	520839	789624	15	342,94,95,212,150,135,36,94,104,141,82,138,156,141,1630,	0,35025,44916,56146,62472,64755,70445,76625,79145,84281,92564,93375,93743,94080,94347,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	439296	439397	chr16:439296-439397	3	-	439296	439296	8553170	1	101,	0,
#Partially deleted in new
chr16	451403	453461	chr16:451403-453461	7	+	451403	451403	16724991	3	141,63,74,	0,961,1984,
#Partially deleted in new
chr16	474849	522478	chr16:474849-522478	1	+	475030	520839	0	12	196,212,150,36,94,104,141,82,138,156,141,1753,	0,7675,14001,21974,28154,30674,35810,44093,44904,45272,45609,45876,
#Partially deleted in new
chr16	474868	505605	chr16:474868-505605	0	+	482551	505605	789624	6	230,212,150,36,94,82,	0,7656,13982,21955,28135,30655,
#Partially deleted in new
chr16	474923	503063	chr16:474923-503063	0	+	475030	503063	789624	5	122,212,150,36,60,	0,7601,13927,21900,28080,
#Partially deleted in new
chr16	474923	489101	chr16:474923-489101	0	+	474923	474923	8553170	3	122,212,251,	0,7601,13927,
#Partially deleted in new
chr16	482656	497448	chr16:482656-497448	0	+	482656	497301	789624	5	80,150,135,36,157,	0,6194,8477,14167,14635,
#Partially deleted in new
chr16	488941	497158	chr16:488941-497158	0	+	488941	488941	8553170	3	59,135,335,	0,2192,7882,
#Partially deleted in new
chr16	502749	519018	chr16:502749-519018	0	+	502749	502749	8553170	4	348,104,141,76,	0,2774,7910,16193,
#Partially deleted in new
chr16	510452	519108	chr16:510452-519108	0	+	510452	510452	8553170	2	348,166,	0,8490,
#Partially deleted in new
chr16	510562	519762	chr16:510562-519762	0	+	510562	510562	8553170	3	238,82,9,	0,8380,9191,
#Deleted in new
chr16	525154	527407	chr16:525154-527407	3	-	525154	525154	8553170	1	2253,	0,
#Partially deleted in new
chr16	527716	547392	chr16:527716-547392	0	+	546838	547392	789624	3	313,53,576,	0,6229,19100,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	527747	539858	chr16:527747-539858	0	+	527747	527747	8553170	4	282,53,114,2725,	0,6198,8281,9386,
#Partially deleted in new
chr16	527822	548209	chr16:527822-548209	0	+	547872	548209	789624	3	207,53,651,	0,6123,19736,
#Partially deleted in new
chr16	527855	554636	chr16:527855-554636	3	+	546838	553516	789624	14	174,53,114,1471,209,184,224,126,153,162,230,167,179,1298,	0,6090,8173,18961,21137,21432,21759,23446,23656,24195,24445,24749,25007,25483,
#Deleted in new
chr16	535315	535368	chr16:535315-535368	3	+	535315	535315	5263520	1	53,	0,
#Deleted in new
chr16	536861	537639	chr16:536861-537639	0	+	536861	536861	8553170	2	34,506,	0,272,
#Partially deleted in new
chr16	540104	548031	chr16:540104-548031	0	+	540189	548031	789624	2	267,1215,	0,6712,
#Deleted in new
chr16	543276	543366	chr16:543276-543366	3	+	543276	543276	5263520	1	90,	0,
#Deleted in new
chr16	547184	553847	chr16:547184-553847	3	-	547184	547184	8553170	2	189,287,	0,6376,
#Deleted in new
chr16	552296	554636	chr16:552296-554636	0	+	552296	552296	8553170	3	475,179,1298,	0,566,1042,
#Deleted in new
chr16	552754	554636	chr16:552754-554636	0	+	552754	554572	789624	3	17,179,83,	0,108,1799,
#Deleted in new
chr16	560421	565528	chr16:560421-565528	3	+	563294	565307	789624	3	240,1121,855,	0,2834,4252,
#Partially deleted in new
chr16	566994	574519	chr16:566994-574519	0	+	574074	574519	789624	3	81,68,454,	0,501,7071,
#Deleted in new
chr16	566995	569487	chr16:566995-569487	3	+	568047	568419	789624	2	80,2017,	0,475,
#Deleted in new
chr16	567004	569495	chr16:567004-569495	1	+	568047	568419	789624	2	71,2000,	0,491,
#Partially deleted in new
chr16	567008	583035	chr16:567008-583035	1	+	574074	583035	789624	12	67,93,698,132,121,127,154,112,81,115,62,153,	0,462,7057,8830,9125,11370,11776,12060,13174,13849,15239,15874,
#Partially deleted in new
chr16	568836	575903	chr16:568836-575903	2	+	568836	568836	8553170	3	153,698,65,	0,5229,7002,
#Partially deleted in new
chr16	569460	576257	chr16:569460-576257	1	+	569460	569460	8553170	4	335,698,132,124,	0,4605,6378,6673,
#Partially deleted in new
chr16	569946	584136	chr16:569946-584136	1	+	574074	583035	789624	11	150,698,132,121,127,154,112,81,115,62,1254,	0,4119,5892,6187,8432,8838,9122,10236,10911,12301,12936,
#Partially deleted in new
chr16	569975	577234	chr16:569975-577234	1	+	574074	576503	789624	4	121,698,132,1101,	0,4090,5863,6158,
#Partially deleted in new
chr16	569980	584094	chr16:569980-584094	0	+	574074	574592	789624	12	116,373,236,132,121,127,154,112,81,115,62,1212,	0,4085,4547,5858,6153,8398,8804,9088,10202,10877,12267,12902,
#Partially deleted in new
chr16	570017	584109	chr16:570017-584109	3	+	574074	583634	789624	10	79,698,132,121,127,154,112,81,115,1227,	0,4048,5821,6116,8361,8767,9051,10165,10840,12865,
#Partially deleted in new
chr16	570061	577217	chr16:570061-577217	1	+	574074	576049	789624	3	35,698,1379,	0,4004,5777,
#Partially deleted in new
chr16	572505	583095	chr16:572505-583095	0	+	572568	582256	789624	12	96,698,132,121,127,154,112,81,115,143,62,213,	0,1560,3333,3628,5873,6279,6563,7677,8352,8693,9742,10377,
#Partially deleted in new
chr16	574331	584083	chr16:574331-584083	0	+	574331	575927	789624	10	107,132,121,127,154,112,81,115,62,1201,	0,1507,1802,4047,4453,4737,5851,6526,7916,8551,
#Partially deleted in new
chr16	574706	583334	chr16:574706-583334	0	+	574706	580891	789624	10	57,132,121,127,154,54,81,115,62,452,	0,1132,1427,3672,4078,4420,5476,6151,7541,8176,
#Partially deleted in new
chr16	574750	582893	chr16:574750-582893	0	+	574750	579170	789624	8	13,132,121,84,112,115,62,11,	0,1088,1383,3628,4318,6107,7497,8132,
#Partially deleted in new
chr16	575945	580922	chr16:575945-580922	0	+	575945	578418	789624	6	57,121,127,112,81,65,	0,188,2433,3123,4237,4912,
#Deleted in new
chr16	577900	578843	chr16:577900-578843	0	+	577900	577900	8553170	3	391,127,59,	0,478,884,
#Deleted in new
chr16	578059	578802	chr16:578059-578802	0	+	578059	578059	8553170	2	446,18,	0,725,
#Deleted in new
chr16	578290	580777	chr16:578290-580777	0	+	578290	578290	8553170	2	1973,27,	0,2460,
#Partially deleted in new
chr16	578404	582647	chr16:578404-582647	0	+	578404	582256	789624	8	101,154,112,81,115,143,62,164,	0,380,664,1778,2453,2794,3843,4079,
#Partially deleted in new
chr16	578830	583455	chr16:578830-583455	0	+	578830	582256	789624	5	108,112,81,62,573,	0,238,1352,3417,4052,
#Partially deleted in new
chr16	578926	584108	chr16:578926-584108	0	+	578926	578926	8553170	5	12,112,790,62,1226,	0,142,1256,3321,3956,
#Partially deleted in new
chr16	579090	583223	chr16:579090-583223	0	+	579090	583035	789624	4	90,115,62,341,	0,1767,3157,3792,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	581760	584108	chr16:581760-584108	0	+	581760	581760	8553170	2	549,1226,	0,1122,
#Deleted in new
chr16	582489	582947	chr16:582489-582947	0	+	582489	582489	8553170	2	122,65,	0,393,
#Deleted in new
chr16	582876	583922	chr16:582876-583922	0	+	582876	582876	8553170	1	1046,	0,
#Deleted in new
chr16	583583	583770	chr16:583583-583770	0	+	583583	583583	8553170	2	83,17,	0,170,
#Partially deleted in new
chr16	589356	629271	chr16:589356-629271	3	+	590291	627622	789624	7	191,173,61,61,78,223,1930,	0,904,27851,28843,36075,36542,37985,
#Partially deleted in new
chr16	589356	626026	chr16:589356-626026	0	+	590291	626026	789624	6	191,173,61,61,78,128,	0,904,27851,28843,36075,36542,
#Partially deleted in new
chr16	589668	629271	chr16:589668-629271	1	+	590291	627622	789624	7	83,173,61,61,78,223,1930,	0,592,27539,28531,35763,36230,37673,
#Partially deleted in new
chr16	589668	627415	chr16:589668-627415	0	+	590291	627415	789624	7	83,173,61,61,78,223,74,	0,592,27539,28531,35763,36230,37673,
#Partially deleted in new
chr16	590067	626121	chr16:590067-626121	0	+	590291	626121	789624	6	52,173,61,61,78,223,	0,193,27140,28132,35364,35831,
#Partially deleted in new
chr16	590076	629271	chr16:590076-629271	1	+	590291	627622	789624	7	43,173,61,61,78,223,1930,	0,184,27131,28123,35355,35822,37265,
#Partially deleted in new
chr16	590088	629272	chr16:590088-629272	1	+	590291	627622	789624	6	345,61,61,78,223,1931,	0,27119,28111,35343,35810,37253,
#Partially deleted in new
chr16	590241	626083	chr16:590241-626083	0	+	590291	625165	789624	6	192,61,61,206,78,185,	0,26966,27958,34795,35190,35657,
#Partially deleted in new
chr16	590295	625993	chr16:590295-625993	0	+	590295	596327	789624	6	138,132,61,61,78,95,	0,6021,26912,27904,35136,35603,
#Partially deleted in new
chr16	590331	627583	chr16:590331-627583	0	+	590331	627583	789624	6	102,61,61,78,166,242,	0,26876,27868,35100,35624,37010,
#Partially deleted in new
chr16	616644	626117	chr16:616644-626117	0	+	626003	626117	789624	3	624,78,219,	0,8787,9254,
#Partially deleted in new
chr16	625613	629272	chr16:625613-629272	0	+	625613	625613	8553170	2	508,1931,	0,1728,
#Deleted in new
chr16	629238	634116	chr16:629238-634116	0	+	629238	629238	8553170	1	4878,	0,
#Deleted in new
chr16	630931	634116	chr16:630931-634116	3	+	631253	634057	0	2	493,1535,	0,1650,
#Deleted in new
chr16	634426	636366	chr16:634426-636366	1	-	634596	636290	789624	5	218,79,68,163,273,	0,292,462,1185,1667,
#Deleted in new
chr16	634428	636342	chr16:634428-636342	1	-	634596	636290	789624	3	216,79,249,	0,290,1665,
#Deleted in new
chr16	634429	636302	chr16:634429-636302	3	-	634596	636290	789624	6	215,79,68,60,163,209,	0,289,459,851,1182,1664,
#Deleted in new
chr16	634429	636302	chr16:634429-636302	1	-	634525	636290	789624	5	215,79,60,163,209,	0,289,851,1182,1664,
#Deleted in new
chr16	634435	636310	chr16:634435-636310	0	-	634435	634435	8553170	3	209,79,1422,	0,283,453,
#Deleted in new
chr16	634437	636351	chr16:634437-636351	1	-	634596	636290	789624	4	207,79,60,258,	0,281,843,1656,
#Deleted in new
chr16	634501	636331	chr16:634501-636331	0	-	634901	636290	789624	5	143,79,68,60,238,	0,217,387,779,1592,
#Deleted in new
chr16	634512	636239	chr16:634512-636239	0	-	634901	636239	789624	6	132,79,175,60,163,146,	0,206,376,768,1099,1581,
#Deleted in new
chr16	634525	636290	chr16:634525-636290	1	-	634525	636290	789624	4	119,79,163,197,	0,193,1086,1568,
#Deleted in new
chr16	634625	636278	chr16:634625-636278	0	-	634906	636278	789624	5	19,79,175,60,185,	0,93,263,655,1468,
#Deleted in new
chr16	634663	636235	chr16:634663-636235	0	-	634674	636235	789624	4	134,60,163,142,	0,617,948,1430,
#Deleted in new
chr16	634736	636260	chr16:634736-636260	0	-	634736	636260	789624	3	61,257,167,	0,781,1357,
#Deleted in new
chr16	634948	636358	chr16:634948-636358	0	-	634948	636290	789624	4	8,60,257,265,	0,332,569,1145,
#Deleted in new
chr16	635280	636267	chr16:635280-636267	0	-	635280	635280	8553170	2	60,656,	0,331,
#Deleted in new
chr16	636816	638620	chr16:636816-638620	0	+	636816	636816	8553170	2	129,598,	0,1206,
#Partially deleted in new
chr16	636902	648474	chr16:636902-648474	0	+	636902	636902	8553170	4	43,128,102,355,	0,10514,10880,11217,
#Deleted in new
chr16	637015	638587	chr16:637015-638587	0	+	637015	637015	8553170	2	41,565,	0,1007,
#Partially deleted in new
chr16	641812	648474	chr16:641812-648474	3	+	641991	648190	789624	5	231,130,128,102,355,	0,307,5604,5970,6307,
#Partially deleted in new
chr16	641845	648474	chr16:641845-648474	0	+	641991	646487	789624	6	198,130,137,128,102,355,	0,274,4626,5571,5937,6274,
#Partially deleted in new
chr16	641848	646487	chr16:641848-646487	1	+	641991	646487	789624	3	195,130,16,	0,271,4623,
#Partially deleted in new
chr16	641928	648474	chr16:641928-648474	0	+	641991	647828	789624	4	115,130,102,355,	0,191,5854,6191,
#Partially deleted in new
chr16	642450	648437	chr16:642450-648437	0	+	642450	642450	8553170	5	694,137,128,102,318,	0,4021,4966,5332,5669,
#Partially deleted in new
chr16	642482	648446	chr16:642482-648446	0	+	642482	642482	8553170	4	662,137,468,327,	0,3989,4934,5637,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	645125	648474	chr16:645125-648474	0	+	645125	645125	8553170	3	1483,468,355,	0,2291,2994,
#Partially deleted in new
chr16	646746	648474	chr16:646746-648474	0	+	646746	646746	8553170	1	1728,	0,
#Partially deleted in new
chr16	648472	649200	chr16:648472-649200	3	-	648472	648472	789624	2	143,246,	0,482,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr16	649310	661075	chr16:649310-661075	0	+	649310	649310	8553170	26	544,177,109,171,109,68,104,216,69,111,146,1402,162,131,765,140,131,131,162,129,116,41,132,104,103,25,	0,680,943,1228,1684,1888,2333,2513,3156,4030,4214,4435,5996,6262,6462,7421,7780,8451,8872,9214,9585,9775,9934,10747,11301,11740,
#Partially deleted in new
chr16	649324	667833	chr16:649324-667833	1	+	649416	667589	789624	41	102,92,177,109,171,109,68,104,213,69,111,146,58,119,162,131,117,236,140,131,131,162,129,116,41,132,104,103,122,160,191,169,112,172,123,175,131,144,120,85,402,	0,438,666,929,1214,1670,1874,2319,2502,3142,4016,4200,4421,5704,5982,6248,6448,6977,7407,7766,8437,8858,9200,9571,9761,9920,10733,11287,11726,12017,12272,12566,12895,13348,16354,16625,16895,17130,17348,17580,18107,
#Partially deleted in new
chr16	649352	656201	chr16:649352-656201	0	+	649352	649352	8553170	17	74,92,177,109,171,109,68,104,213,69,111,146,58,119,162,131,429,	0,410,638,901,1186,1642,1846,2291,2474,3114,3988,4172,4393,5676,5954,6220,6420,
#Partially deleted in new
chr16	649352	656201	chr16:649352-656201	0	+	649352	649352	8553170	17	74,92,177,109,171,109,68,104,216,69,111,146,58,119,162,131,429,	0,410,638,901,1186,1642,1846,2291,2471,3114,3988,4172,4393,5676,5954,6220,6420,
#Partially deleted in new
chr16	649416	667830	chr16:649416-667830	3	+	649416	667589	789624	41	10,92,177,109,171,109,68,104,213,69,111,146,58,119,162,131,117,236,140,131,131,162,129,116,41,132,104,103,122,160,191,169,112,166,123,175,131,144,120,85,399,	0,346,574,837,1122,1578,1782,2227,2410,3050,3924,4108,4329,5612,5890,6156,6356,6885,7315,7674,8345,8766,9108,9479,9669,9828,10641,11195,11634,11925,12180,12474,12803,13262,16262,16533,16803,17038,17256,17488,18015,
#Partially deleted in new
chr16	652121	653470	chr16:652121-653470	0	+	652121	652121	8553170	2	414,130,	0,1219,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	654610	656194	chr16:654610-656194	3	-	654610	654610	8553170	2	771,646,	0,938,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr16	655057	663433	chr16:655057-663433	0	+	655057	655057	8553170	20	411,131,117,236,140,131,131,162,129,116,41,132,104,103,122,160,191,169,112,755,	0,515,715,1244,1674,2033,2704,3125,3467,3838,4028,4187,5000,5554,5993,6284,6539,6833,7162,7621,
#Deleted in new
chr16	655057	657123	chr16:655057-657123	0	+	655057	655057	8553170	7	90,162,131,113,236,140,33,	0,249,515,715,1244,1674,2033,
#Partially deleted in new
chr16	656274	667829	chr16:656274-667829	0	+	656274	656274	8553170	24	263,57,131,131,162,129,116,41,132,104,259,122,160,191,169,112,392,123,175,131,144,120,85,398,	0,540,816,1487,1908,2250,2621,2811,2970,3783,4337,4776,5067,5322,5616,5945,6398,9404,9675,9945,10180,10398,10630,11157,
#Partially deleted in new
chr16	656420	667830	chr16:656420-667830	0	+	656420	661445	789624	22	117,140,131,131,162,129,116,41,132,103,122,160,191,169,112,123,175,131,144,120,85,399,	0,311,670,1341,1762,2104,2475,2665,2824,4191,4630,4921,5176,5470,5799,9258,9529,9799,10034,10252,10484,11011,
#Deleted in new
chr16	656432	657357	chr16:656432-657357	0	+	656432	656432	8553170	3	105,140,267,	0,299,658,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	657857	663438	chr16:657857-663438	0	+	657857	657857	8553170	14	35,162,129,116,41,132,104,103,122,160,191,169,112,766,	0,325,667,1038,1228,1387,2200,2754,3193,3484,3739,4033,4362,4815,
#Deleted in new
chr16	658559	661075	chr16:658559-661075	0	+	658559	658559	8553170	6	55,116,41,132,103,25,	0,336,526,685,2052,2491,
#Deleted in new
chr16	659244	660714	chr16:659244-660714	0	+	659244	660714	789624	3	132,104,163,	0,813,1307,
#Partially deleted in new
chr16	661064	667829	chr16:661064-667829	0	+	661064	661064	8553170	12	437,191,169,112,172,123,175,131,144,120,85,398,	0,532,826,1155,1608,4614,4885,5155,5390,5608,5840,6367,
#Deleted in new
chr16	661587	662224	chr16:661587-662224	0	+	661587	661587	8553170	3	200,169,5,	0,303,632,
#Deleted in new
chr16	661731	662736	chr16:661731-662736	0	+	661731	661731	8553170	3	56,169,517,	0,159,488,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	662274	663437	chr16:662274-663437	0	+	662274	662274	8553170	3	57,172,293,	0,398,870,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	663139	666745	chr16:663139-666745	0	+	663139	663139	8553170	6	414,123,175,131,144,73,	0,2539,2810,3080,3315,3533,
#Deleted in new
chr16	664987	667829	chr16:664987-667829	0	+	664987	664987	8553170	6	814,175,131,338,85,398,	0,962,1232,1467,1917,2444,
#Deleted in new
chr16	665183	667830	chr16:665183-667830	1	+	665570	667589	789624	7	618,175,131,144,120,85,399,	0,766,1036,1271,1489,1721,2248,
#Deleted in new
chr16	665257	667830	chr16:665257-667830	1	+	665570	667589	789624	6	544,175,131,120,85,399,	0,692,962,1415,1647,2174,
#Deleted in new
chr16	665873	666361	chr16:665873-666361	0	+	665873	665873	8553170	2	251,142,	0,346,
#Deleted in new
chr16	666495	667831	chr16:666495-667831	0	+	666495	667443	789624	3	103,120,400,	0,177,936,
#Deleted in new
chr16	666910	667830	chr16:666910-667830	0	+	666910	667782	789624	2	79,317,	0,603,
#Deleted in new
chr16	668085	674174	chr16:668085-674174	3	+	668199	673606	0	19	151,59,82,44,54,53,109,102,99,109,121,85,143,98,131,78,123,203,695,	0,267,402,570,1467,2037,2163,2370,2589,2806,2997,3611,3774,3998,4168,4403,4617,4842,5394,
#Deleted in new
chr16	668104	671199	chr16:668104-671199	0	+	668199	670344	789624	9	132,59,82,44,54,53,92,102,426,	0,248,383,551,1448,2018,2161,2351,2669,
#Deleted in new
chr16	668104	671162	chr16:668104-671162	0	+	668104	668104	8553170	9	50,59,82,44,54,53,92,102,387,	0,248,383,551,1448,2018,2161,2351,2671,
#Deleted in new
chr16	668105	670993	chr16:668105-670993	0	+	668199	670993	789624	9	131,59,82,44,54,53,109,102,102,	0,247,382,550,1447,2017,2143,2350,2786,
#Deleted in new
chr16	668111	670525	chr16:668111-670525	0	+	668111	668111	8553170	7	125,217,44,54,53,109,70,	0,241,544,1441,2011,2137,2344,
#Deleted in new
chr16	668123	670507	chr16:668123-670507	0	+	668123	668123	8553170	5	113,347,53,109,52,	0,229,1999,2125,2332,
#Deleted in new
chr16	668131	668881	chr16:668131-668881	0	+	668131	668131	8553170	3	280,82,226,	0,356,524,
#Deleted in new
chr16	668134	674174	chr16:668134-674174	0	+	668134	668134	8553170	18	102,59,212,54,53,92,102,99,109,121,85,143,98,131,78,123,203,695,	0,218,353,1418,1988,2131,2321,2540,2757,2948,3562,3725,3949,4119,4354,4568,4793,5345,
#Deleted in new
chr16	668150	671934	chr16:668150-671934	0	+	668199	670150	789624	12	86,59,41,54,53,109,102,99,109,121,85,75,	0,202,508,1402,1972,2098,2305,2524,2741,2932,3546,3709,
#Deleted in new
chr16	668150	670773	chr16:668150-670773	0	+	668199	669578	789624	9	86,54,82,44,54,53,109,102,99,	0,207,337,505,1402,1972,2098,2305,2524,
#Deleted in new
chr16	668152	671131	chr16:668152-671131	0	+	668199	670150	789624	9	84,59,44,53,109,102,99,109,49,	0,200,503,1970,2096,2303,2522,2739,2930,
#Deleted in new
chr16	668161	671933	chr16:668161-671933	0	+	668161	668161	8553170	11	75,59,82,44,53,109,102,99,312,85,74,	0,191,326,494,1961,2087,2294,2513,2730,3535,3698,
#Deleted in new
chr16	668177	672297	chr16:668177-672297	0	+	668177	668177	8553170	14	59,59,82,44,54,53,109,102,99,312,85,143,98,44,	0,175,310,478,1375,1945,2071,2278,2497,2714,3519,3682,3906,4076,
#Deleted in new
chr16	668179	673308	chr16:668179-673308	0	+	668179	668179	8553170	12	57,217,1520,109,102,99,312,85,143,98,572,381,	0,173,476,2069,2276,2495,2712,3517,3680,3904,4074,4748,
#Deleted in new
chr16	668181	670538	chr16:668181-670538	0	+	668181	668181	8553170	7	55,59,82,44,54,235,83,	0,171,306,474,1371,1941,2274,
#Deleted in new
chr16	668186	671993	chr16:668186-671993	0	+	668199	670344	789624	13	50,59,82,44,54,53,92,102,99,109,89,85,134,	0,166,301,469,1366,1936,2079,2269,2488,2705,2928,3510,3673,
#Deleted in new
chr16	668208	670940	chr16:668208-670940	0	+	668208	670940	789624	9	28,59,82,44,53,109,102,99,49,	0,144,279,447,1914,2040,2247,2466,2683,
#Deleted in new
chr16	668352	670959	chr16:668352-670959	0	+	668352	668352	8553170	7	59,82,44,53,109,102,186,	0,135,303,1770,1896,2103,2421,
#Deleted in new
chr16	668559	671785	chr16:668559-671785	0	+	668559	668559	8553170	9	140,54,53,109,102,99,112,121,89,	0,993,1563,1689,1896,2115,2329,2523,3137,
#Deleted in new
chr16	668657	674125	chr16:668657-674125	0	+	668657	668657	8553170	11	42,623,92,102,99,312,85,322,572,203,646,	0,895,1608,1798,2017,2234,3039,3202,3596,4270,4822,
#Deleted in new
chr16	670454	673059	chr16:670454-673059	0	+	670454	670454	8553170	10	103,78,109,89,85,143,98,313,123,132,	0,241,437,660,1242,1405,1629,1799,2248,2473,
#Deleted in new
chr16	670527	671312	chr16:670527-671312	0	+	670527	670527	8553170	3	30,99,421,	0,147,364,
#Deleted in new
chr16	671081	673057	chr16:671081-673057	0	+	671081	671081	8553170	7	122,85,143,98,313,123,130,	0,615,778,1002,1172,1621,1846,
#Deleted in new
chr16	671916	672817	chr16:671916-672817	0	+	671916	671916	8553170	4	86,98,131,329,	0,167,337,572,
#Deleted in new
chr16	672667	673972	chr16:672667-673972	0	+	672667	672667	8553170	3	158,203,493,	0,260,812,
#Deleted in new
chr16	672748	674165	chr16:672748-674165	0	+	672748	674102	789624	4	77,203,18,232,	0,179,731,1185,
#Deleted in new
chr16	672791	673537	chr16:672791-673537	0	+	672791	672791	8553170	2	339,58,	0,688,
#Deleted in new
chr16	675665	678268	chr16:675665-678268	3	+	675790	678052	789624	8	164,162,225,149,113,101,61,488,	0,670,1006,1305,1610,1793,1973,2115,
#Deleted in new
chr16	675682	677843	chr16:675682-677843	0	+	675790	677843	789624	7	147,162,149,113,101,61,63,	0,653,1288,1593,1776,1956,2098,
#Deleted in new
chr16	675721	678267	chr16:675721-678267	0	+	675721	675721	8553170	6	108,162,225,149,113,809,	0,614,950,1249,1554,1737,
#Deleted in new
chr16	676074	678268	chr16:676074-678268	1	+	676101	678052	789624	7	423,225,149,113,101,61,488,	0,597,896,1201,1384,1564,1706,
#Deleted in new
chr16	678503	679777	chr16:678503-679777	3	-	678503	678503	789624	4	304,94,158,174,	0,432,705,1100,
#Deleted in new
chr16	678517	679737	chr16:678517-679737	1	-	678517	678517	8553170	1	1220,	0,
#Deleted in new
chr16	678644	679061	chr16:678644-679061	3	+	678644	678644	8553170	1	417,	0,
#Deleted in new
chr16	680223	682746	chr16:680223-682746	1	+	681208	682489	0	7	461,288,166,88,57,117,383,	0,839,1214,1569,1796,1941,2140,
#Deleted in new
chr16	680275	682799	chr16:680275-682799	3	+	680525	682489	0	7	409,199,166,88,57,117,436,	0,876,1162,1517,1744,1889,2088,
#Deleted in new
chr16	680418	682717	chr16:680418-682717	0	+	680418	680418	8553170	5	932,166,284,117,354,	0,1019,1374,1746,1945,
#Deleted in new
chr16	680423	682193	chr16:680423-682193	0	+	680525	682193	789624	6	261,142,166,88,57,29,	0,785,1014,1369,1596,1741,
#Deleted in new
chr16	680429	682066	chr16:680429-682066	0	+	680429	680429	8553170	4	255,199,166,274,	0,722,1008,1363,
#Deleted in new
chr16	680438	681390	chr16:680438-681390	0	+	680438	680438	8553170	2	246,182,	0,770,
#Deleted in new
chr16	681036	682496	chr16:681036-682496	1	+	681208	682489	0	6	314,166,88,57,117,133,	0,401,756,983,1128,1327,
#Deleted in new
chr16	681223	682213	chr16:681223-682213	0	+	681223	681223	8553170	5	127,166,111,57,49,	0,214,569,796,941,
#Deleted in new
chr16	681275	682462	chr16:681275-682462	0	+	681275	682335	789624	5	75,166,88,57,298,	0,162,517,744,889,
#Deleted in new
chr16	681480	682746	chr16:681480-682746	0	+	681480	682489	789624	5	123,88,18,117,383,	0,312,578,684,883,
#Deleted in new
chr16	681670	684439	chr16:681670-684439	3	-	682793	684382	789624	9	1204,135,68,120,69,97,49,90,206,	0,1282,1496,1651,1859,2014,2190,2395,2563,
#Deleted in new
chr16	681670	684528	chr16:681670-684528	0	-	681670	681670	789624	8	1204,135,68,120,69,97,49,463,	0,1282,1496,1651,1859,2014,2190,2395,
#Deleted in new
chr16	681697	684336	chr16:681697-684336	0	-	681697	681697	8553170	6	1390,68,120,69,225,103,	0,1469,1624,1832,1987,2536,
#Deleted in new
chr16	681698	684344	chr16:681698-684344	0	-	681698	681698	8553170	8	1176,130,68,277,97,49,90,111,	0,1259,1468,1623,1986,2162,2367,2535,
#Deleted in new
chr16	681702	684334	chr16:681702-684334	1	-	682793	684319	789624	9	1172,135,68,120,69,97,49,90,101,	0,1250,1464,1619,1827,1982,2158,2363,2531,
#Deleted in new
chr16	682073	683106	chr16:682073-683106	0	-	682073	682073	8553170	2	801,154,	0,879,
#Deleted in new
chr16	682405	684320	chr16:682405-684320	0	-	682405	682405	8553170	7	469,135,68,277,97,295,87,	0,547,761,916,1279,1455,1828,
#Deleted in new
chr16	682415	682870	chr16:682415-682870	0	+	682415	682489	789624	2	273,64,	0,391,
#Deleted in new
chr16	682527	684363	chr16:682527-684363	1	-	682793	684319	789624	8	347,135,68,120,69,97,49,130,	0,425,639,794,1002,1157,1333,1706,
#Deleted in new
chr16	682542	684155	chr16:682542-684155	0	-	682542	682542	8553170	7	332,135,68,120,69,97,246,	0,410,624,779,987,1142,1367,
#Deleted in new
chr16	682574	683586	chr16:682574-683586	0	-	682574	682574	8553170	3	300,68,265,	0,592,747,
#Deleted in new
chr16	682657	684346	chr16:682657-684346	1	-	682793	684319	789624	8	217,68,120,69,97,49,90,113,	0,509,664,872,1027,1203,1408,1576,
#Deleted in new
chr16	682657	684101	chr16:682657-684101	0	-	682657	682657	8553170	7	217,135,68,120,69,225,36,	0,295,509,664,872,1027,1408,
#Deleted in new
chr16	682771	683600	chr16:682771-683600	0	-	683180	683600	789624	5	103,135,68,120,71,	0,181,395,550,758,
#Deleted in new
chr16	683184	684331	chr16:683184-684331	0	-	683184	683184	8553170	6	50,120,69,97,295,98,	0,137,345,500,676,1049,
#Deleted in new
chr16	683342	684314	chr16:683342-684314	0	-	683342	683342	8553170	4	99,69,97,454,	0,187,342,518,
#Deleted in new
chr16	683354	684303	chr16:683354-684303	0	-	683354	683354	8553170	3	244,471,70,	0,330,879,
#Partially deleted in new
chr16	684621	690400	chr16:684621-690400	3	-	684733	689640	789624	9	281,185,341,105,122,119,673,178,1241,	0,370,635,1057,1247,1446,2122,2940,4538,
#Partially deleted in new
chr16	684632	690247	chr16:684632-690247	1	-	684733	689640	8553170	10	270,185,341,105,122,119,673,178,222,1088,	0,359,624,1046,1236,1435,2111,2929,3194,4527,
#Partially deleted in new
chr16	684733	690444	chr16:684733-690444	1	-	684733	690444	789624	13	169,185,341,105,122,119,673,178,53,133,501,109,75,	0,258,523,945,1135,1334,2010,2828,3093,3227,4408,5243,5636,
#Deleted in new
chr16	685449	686929	chr16:685449-686929	0	-	685449	685449	8553170	4	148,105,318,186,	0,229,419,1294,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	689000	692413	chr16:689000-692413	0	+	689000	689000	8553170	1	3413,	0,
#Partially deleted in new
chr16	689493	692554	chr16:689493-692554	3	+	689493	689493	8553170	2	157,250,	0,2811,
#Deleted in new
chr16	692497	695532	chr16:692497-695532	0	-	692497	692497	8553170	3	1926,64,541,	0,2136,2494,
#Partially deleted in new
chr16	692499	705829	chr16:692499-705829	3	-	694274	697405	789624	6	1924,64,85,509,647,318,	0,2134,2492,2915,4273,13012,
#Partially deleted in new
chr16	692506	705808	chr16:692506-705808	1	-	694274	697405	789624	7	1917,64,85,509,647,61,128,	0,2127,2485,2908,4266,13005,13174,
#Deleted in new
chr16	692926	696025	chr16:692926-696025	1	-	694274	695920	789624	4	1497,64,85,611,	0,1707,2065,2488,
#Deleted in new
chr16	694657	695263	chr16:694657-695263	0	-	694657	694657	8553170	3	40,85,48,	0,334,558,
#Deleted in new
chr16	707649	709067	chr16:707649-709067	3	+	707649	707649	8553170	1	1418,	0,
#Deleted in new
chr16	710745	711277	chr16:710745-711277	3	-	710745	710745	8553170	2	106,340,	0,192,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	715114	719655	chr16:715114-719655	3	+	715289	717387	789624	4	279,401,60,2585,	0,469,1818,1956,
#Deleted in new
chr16	715236	717247	chr16:715236-717247	0	+	715289	715981	789624	4	157,109,60,177,	0,639,1696,1834,
#Deleted in new
chr16	715337	717390	chr16:715337-717390	0	+	715337	717039	789624	3	56,401,458,	0,246,1595,
#Deleted in new
chr16	715640	717477	chr16:715640-717477	0	+	715640	717477	789624	4	344,60,65,54,	0,1292,1430,1783,
#Deleted in new
chr16	716426	717817	chr16:716426-717817	0	+	716426	716426	8553170	2	289,885,	0,506,
#Deleted in new
chr16	716573	717480	chr16:716573-717480	1	+	716609	717387	789624	3	142,60,410,	0,359,497,
#Deleted in new
chr16	720580	722589	chr16:720580-722589	0	+	720580	720580	8553170	3	1122,283,281,	0,1220,1728,
#Deleted in new
chr16	720974	722601	chr16:720974-722601	3	+	721274	722557	789624	5	462,105,141,51,293,	0,623,826,1109,1334,
#Deleted in new
chr16	721096	722585	chr16:721096-722585	1	+	721274	722200	789624	4	340,105,141,502,	0,501,704,987,
#Deleted in new
chr16	721141	722573	chr16:721141-722573	1	+	721274	722557	789624	4	295,105,141,265,	0,456,659,1167,
#Deleted in new
chr16	721145	722312	chr16:721145-722312	0	+	721145	721145	8553170	3	291,105,512,	0,452,655,
#Deleted in new
chr16	721224	722508	chr16:721224-722508	0	+	721224	721224	8553170	4	212,105,283,200,	0,373,576,1084,
#Deleted in new
chr16	721671	722590	chr16:721671-722590	0	+	721671	722557	789624	3	31,141,282,	0,129,637,
#Deleted in new
chr16	721941	722590	chr16:721941-722590	0	+	721941	721941	8553170	2	193,282,	0,367,
#Deleted in new
chr16	722581	726473	chr16:722581-726473	3	-	722769	726367	789624	14	208,97,67,80,100,188,126,79,68,57,168,87,120,166,	0,340,513,1275,1524,1740,2099,2329,2496,2655,2831,3212,3384,3726,
#Deleted in new
chr16	722581	725274	chr16:722581-725274	0	-	722677	725274	789624	10	208,101,67,80,100,188,126,79,68,38,	0,340,513,1275,1524,1740,2099,2329,2496,2655,
#Deleted in new
chr16	722581	726430	chr16:722581-726430	0	-	722581	722581	8553170	12	208,101,67,80,100,485,235,57,168,87,120,123,	0,340,513,1275,1524,1740,2329,2655,2831,3212,3384,3726,
#Deleted in new
chr16	722581	726456	chr16:722581-726456	0	-	722581	722581	8553170	4	2712,168,87,491,	0,2831,3212,3384,
#Deleted in new
chr16	722581	726429	chr16:722581-726429	0	-	722581	722581	8553170	12	208,240,80,100,188,126,79,216,168,87,120,122,	0,340,1275,1524,1740,2099,2329,2496,2831,3212,3384,3726,
#Deleted in new
chr16	722582	726443	chr16:722582-726443	0	-	722582	722582	8553170	4	2711,87,120,136,	0,3211,3383,3725,
#Deleted in new
chr16	722587	726880	chr16:722587-726880	0	-	722587	722587	8553170	13	202,101,67,80,100,485,79,68,57,135,87,120,266,	0,334,507,1269,1518,1734,2323,2490,2649,2858,3206,3378,4027,
#Deleted in new
chr16	722587	726443	chr16:722587-726443	0	-	722587	722587	8553170	5	202,1015,1775,120,136,	0,334,1518,3378,3720,
#Deleted in new
chr16	722624	724635	chr16:722624-724635	0	-	722624	722624	8553170	5	165,240,80,100,314,	0,297,1232,1481,1697,
#Deleted in new
chr16	724541	726437	chr16:724541-726437	0	-	724541	724541	8553170	6	604,57,168,87,120,130,	0,695,871,1252,1424,1766,
#Deleted in new
chr16	724549	726444	chr16:724549-726444	0	-	724549	724549	8553170	7	257,79,216,168,87,120,137,	0,361,528,863,1244,1416,1758,
#Deleted in new
chr16	724906	726367	chr16:724906-726367	0	-	724906	724906	8553170	5	387,135,87,120,60,	0,539,887,1059,1401,
#Deleted in new
chr16	724926	726846	chr16:724926-726846	0	-	724926	725275	789624	7	63,68,57,168,87,120,58,	0,151,310,486,867,1039,1862,
#Deleted in new
chr16	724983	725855	chr16:724983-725855	0	-	724983	724983	8553170	3	310,179,62,	0,429,810,
#Deleted in new
chr16	725000	726954	chr16:725000-726954	0	-	725000	725000	8553170	6	145,57,168,87,120,166,	0,236,412,793,965,1788,
#Deleted in new
chr16	725122	726868	chr16:725122-726868	0	-	725122	725122	8553170	4	171,87,120,128,	0,671,843,1618,
#Deleted in new
chr16	726935	729733	chr16:726935-729733	1	+	727509	728825	789624	6	205,203,65,118,289,940,	0,476,1029,1180,1380,1858,
#Deleted in new
chr16	726957	729715	chr16:726957-729715	1	+	727509	729168	789624	7	183,203,65,118,109,101,922,	0,454,1007,1158,1358,1546,1836,
#Deleted in new
chr16	727105	727549	chr16:727105-727549	0	+	727509	727549	789624	2	35,65,	0,379,
#Deleted in new
chr16	727105	729715	chr16:727105-729715	1	+	727509	728825	789624	6	70,203,65,118,289,922,	0,306,859,1010,1210,1688,
#Deleted in new
chr16	727118	728895	chr16:727118-728895	0	+	727509	728895	789624	7	22,133,65,118,109,101,102,	0,363,846,997,1197,1385,1675,
#Deleted in new
chr16	727245	729185	chr16:727245-729185	1	+	727509	729092	789624	7	369,65,118,109,101,102,177,	0,719,870,1070,1258,1548,1763,
#Deleted in new
chr16	727261	728985	chr16:727261-728985	1	+	727509	728825	789624	3	353,118,192,	0,854,1532,
#Deleted in new
chr16	727270	729715	chr16:727270-729715	3	+	727509	729456	789624	8	344,65,118,109,101,102,80,428,	0,694,845,1045,1233,1523,1738,2017,
#Deleted in new
chr16	727274	728532	chr16:727274-728532	0	+	727274	727274	8553170	3	340,118,217,	0,841,1041,
#Deleted in new
chr16	727292	728624	chr16:727292-728624	0	+	727509	728624	789624	5	322,65,118,109,121,	0,672,823,1023,1211,
#Deleted in new
chr16	727317	729715	chr16:727317-729715	0	+	727317	727317	8553170	3	712,780,707,	0,798,1691,
#Deleted in new
chr16	727317	728166	chr16:727317-728166	0	+	727317	727317	8553170	2	362,202,	0,647,
#Deleted in new
chr16	727345	728603	chr16:727345-728603	0	+	727509	728603	789624	4	269,65,118,288,	0,619,770,970,
#Deleted in new
chr16	727404	729715	chr16:727404-729715	0	+	727404	727404	8553170	7	210,65,309,101,102,80,428,	0,560,711,1099,1389,1604,1883,
#Deleted in new
chr16	727738	728399	chr16:727738-728399	0	+	727907	728399	789624	3	291,118,84,	0,377,577,
#Deleted in new
chr16	728351	729087	chr16:728351-729087	0	+	728351	728825	789624	3	253,102,79,	0,442,657,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	728510	735353	chr16:728510-735353	0	+	728510	728510	8553170	3	94,502,1885,	0,4147,4958,
#Partially deleted in new
chr16	728513	733847	chr16:728513-733847	0	+	728513	728513	8553170	3	91,102,379,	0,280,4955,
#Deleted in new
chr16	728571	729313	chr16:728571-729313	0	+	728571	728825	789624	3	33,102,305,	0,222,437,
#Partially deleted in new
chr16	729752	741002	chr16:729752-741002	3	-	730416	740985	789624	11	903,158,138,73,130,119,135,133,144,96,83,	0,1090,1812,2548,3545,4476,4984,6513,7433,9890,11167,
#Partially deleted in new
chr16	729759	737889	chr16:729759-737889	1	-	730416	736398	789624	9	896,158,138,73,130,119,135,133,704,	0,1083,1805,2541,3538,4469,4977,6506,7426,
#Partially deleted in new
chr16	729765	740934	chr16:729765-740934	1	-	730416	736398	789624	10	890,158,138,73,130,119,135,133,144,1292,	0,1077,1799,2535,3532,4463,4971,6500,7420,9877,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	729765	733334	chr16:729765-733334	0	-	729765	729765	8553170	3	890,158,1770,	0,1077,1799,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	729770	732900	chr16:729770-732900	0	-	729770	729770	8553170	2	885,2058,	0,1072,
#Partially deleted in new
chr16	729808	740997	chr16:729808-740997	0	-	733420	740985	789624	10	847,158,138,73,130,119,135,144,96,78,	0,1034,1756,2492,3489,4420,4928,7377,9834,11111,
#Partially deleted in new
chr16	730104	734238	chr16:730104-734238	0	-	730104	730104	8553170	6	551,158,138,73,130,609,	0,738,1460,2196,3193,3525,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	730201	732900	chr16:730201-732900	0	-	730201	730201	8553170	4	454,158,138,600,	0,641,1363,2099,
#Partially deleted in new
chr16	732331	737755	chr16:732331-737755	0	-	732331	736398	789624	7	42,130,119,135,133,144,258,	0,966,1897,2405,3934,4854,5166,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	733054	735525	chr16:733054-735525	0	+	733054	733054	8553170	2	105,2057,	0,414,
#Partially deleted in new
chr16	733701	740997	chr16:733701-740997	0	-	733701	733701	8553170	4	1170,144,96,78,	0,3484,5941,7218,
#Partially deleted in new
chr16	733840	740997	chr16:733840-740997	0	-	733840	733840	8553170	5	507,135,144,96,78,	0,896,3345,5802,7079,
#Partially deleted in new
chr16	734077	736370	chr16:734077-736370	0	-	734077	734077	8553170	3	270,135,105,	0,659,2188,
#Partially deleted in new
chr16	734283	737752	chr16:734283-737752	0	-	734283	736398	789624	5	64,135,133,144,92,	0,453,1982,2902,3377,
#Partially deleted in new
chr16	734714	737464	chr16:734714-737464	0	-	734714	734714	8553170	3	157,133,279,	0,1551,2471,
#Partially deleted in new
chr16	734770	740997	chr16:734770-740997	0	-	739673	740985	789624	6	101,133,144,96,82,78,	0,1495,2415,4872,5251,6149,
#Partially deleted in new
chr16	734844	741329	chr16:734844-741329	0	-	734844	736398	789624	5	27,133,144,96,161,	0,1421,2341,4798,6324,
#Partially deleted in new
chr16	736264	740988	chr16:736264-740988	0	-	739555	740985	789624	4	134,144,199,69,	0,921,3275,4655,
#Partially deleted in new
chr16	736367	741015	chr16:736367-741015	0	-	737656	740985	789624	5	31,144,198,96,96,	0,818,1130,3275,4552,
#Partially deleted in new
chr16	736993	740997	chr16:736993-740997	0	-	736993	736993	8553170	3	336,96,78,	0,2649,3926,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	737980	740997	chr16:737980-740997	0	-	737980	737980	8553170	3	482,33,78,	0,1725,2939,
#Deleted in new
chr16	739317	740997	chr16:739317-740997	0	-	739317	739317	8553170	2	421,78,	0,1602,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr16	760761	768862	chr16:760761-768862	1	+	762680	768733	0	18	60,42,94,44,50,121,80,130,194,91,100,179,156,143,128,95,187,215,	0,371,1910,2471,2880,3261,3885,4145,4348,4765,4929,5297,5573,5906,6123,6614,7617,7886,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr16	760764	768858	chr16:760764-768858	1	+	762680	768733	0	18	57,102,94,44,50,121,80,130,194,91,100,179,156,143,128,95,187,211,	0,308,1907,2468,2877,3258,3882,4142,4345,4762,4926,5294,5570,5903,6120,6611,7614,7883,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr16	760766	768865	chr16:760766-768865	1	+	762680	768733	0	17	408,94,44,50,121,80,130,194,91,100,179,156,143,128,95,187,218,	0,1905,2466,2875,3256,3880,4140,4343,4760,4924,5292,5568,5901,6118,6609,7612,7881,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr16	761088	768861	chr16:761088-768861	3	+	762680	768733	0	17	86,94,44,50,121,80,130,194,91,100,179,156,167,128,95,187,214,	0,1583,2144,2553,2934,3558,3818,4021,4438,4602,4970,5246,5555,5796,6287,7290,7559,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	761097	766429	chr16:761097-766429	0	+	762680	766429	789624	11	77,94,44,50,121,80,130,114,100,179,95,	0,1574,2135,2544,2925,3549,3809,4012,4593,4961,5237,
#Deleted in new
chr16	762523	765036	chr16:762523-765036	0	+	762680	765036	789624	7	31,94,44,50,121,80,130,	0,148,709,1118,1499,2123,2383,
#Deleted in new
chr16	765731	768798	chr16:765731-768798	0	+	765731	768733	789624	8	59,179,156,143,128,95,187,121,	0,327,603,936,1153,1644,2647,2946,
#Deleted in new
chr16	765783	768865	chr16:765783-768865	0	+	765783	768865	789624	7	7,179,156,143,128,95,487,	0,275,551,884,1101,1592,2595,
#Deleted in new
chr16	769118	769443	chr16:769118-769443	3	-	769118	769118	8553170	1	325,	0,
#Partially deleted in new
chr16	769427	783370	chr16:769427-783370	3	-	769427	783370	789624	15	206,262,140,131,128,156,170,142,91,180,138,86,121,121,37,	0,601,1104,1403,3256,3462,3701,4759,4986,5408,5718,5990,9214,10614,13906,
#Partially deleted in new
chr16	769427	782054	chr16:769427-782054	0	-	769427	782054	789624	15	206,262,140,131,128,156,170,142,91,250,143,81,137,121,101,	0,601,1104,1403,3256,3462,3701,4759,4986,5408,5713,5990,9198,10614,12526,
#Deleted in new
chr16	770182	770277	chr16:770182-770277	3	+	770182	770182	5263520	1	95,	0,
#Partially deleted in new
chr16	774187	778700	chr16:774187-778700	0	-	774187	774187	8553170	5	141,91,448,81,59,	0,226,648,1230,4454,
#Deleted in new
chr16	784973	788383	chr16:784973-788383	3	-	785949	787737	0	6	1404,102,103,124,189,128,	0,1853,2103,2380,2582,3282,
#Deleted in new
chr16	784973	787981	chr16:784973-787981	1	-	785949	787737	0	5	1404,102,103,124,426,	0,1853,2103,2380,2582,
#Deleted in new
chr16	784990	788371	chr16:784990-788371	1	-	786838	787737	789624	5	1387,102,124,189,116,	0,1836,2363,2565,3265,
#Deleted in new
chr16	785013	788397	chr16:785013-788397	1	-	785949	787098	789624	5	1364,102,103,124,142,	0,1813,2063,2340,3242,
#Deleted in new
chr16	785967	788334	chr16:785967-788334	0	-	785967	787098	789624	6	410,102,112,124,90,79,	0,859,1100,1386,1588,2288,
#Deleted in new
chr16	785982	788381	chr16:785982-788381	0	-	785982	787098	789624	6	395,102,103,124,90,126,	0,844,1094,1371,1573,2273,
#Deleted in new
chr16	786148	788333	chr16:786148-788333	0	-	786921	787737	789624	6	229,102,103,134,189,78,	0,678,928,1195,1407,2107,
#Deleted in new
chr16	786193	787469	chr16:786193-787469	0	-	786611	787469	789624	3	735,103,116,	0,883,1160,
#Deleted in new
chr16	786825	788340	chr16:786825-788340	0	-	787148	787737	789624	5	103,103,81,189,85,	0,251,571,730,1430,
#Deleted in new
chr16	786840	788329	chr16:786840-788329	0	-	786840	787737	789624	5	88,112,124,189,74,	0,227,513,715,1415,
#Deleted in new
chr16	788045	797975	chr16:788045-797975	1	+	788045	797975	789624	24	71,611,195,153,167,93,53,136,210,98,124,152,94,84,131,145,60,225,150,131,145,132,58,137,	0,119,885,1164,1503,2131,2301,2485,3115,3805,4178,4393,4672,4935,5098,5612,6096,7086,7639,7901,8671,8915,9648,9793,
#Deleted in new
chr16	788621	798074	chr16:788621-798074	3	+	788684	797975	789624	22	154,195,151,169,93,53,142,210,98,124,152,94,99,131,148,225,150,131,145,132,58,236,	0,309,588,925,1555,1725,1903,2539,3229,3602,3817,4096,4344,4522,5432,6510,7063,7325,8095,8339,9072,9217,
#Deleted in new
chr16	788621	798063	chr16:788621-798063	0	+	788621	788621	8553170	18	154,155,100,93,53,1843,152,94,99,131,148,225,150,131,145,132,58,225,	0,309,994,1555,1725,1903,3817,4096,4344,4522,5432,6510,7063,7325,8095,8339,9072,9217,
#Deleted in new
chr16	788623	798074	chr16:788623-798074	1	+	788684	797975	789624	21	152,430,169,93,53,142,210,98,124,152,94,99,131,148,225,150,131,145,132,58,236,	0,307,923,1553,1723,1901,2537,3227,3600,3815,4094,4342,4520,5430,6508,7061,7323,8093,8337,9070,9215,
#Deleted in new
chr16	788623	790805	chr16:788623-790805	0	+	788623	788623	8553170	7	152,195,151,169,93,69,281,	0,307,586,923,1553,1707,1901,
#Deleted in new
chr16	788623	789636	chr16:788623-789636	0	+	788684	789254	789624	4	133,195,151,90,	0,307,586,923,
#Deleted in new
chr16	788623	789340	chr16:788623-789340	0	+	788623	788623	8553170	3	152,195,124,	0,307,593,
#Deleted in new
chr16	788624	797975	chr16:788624-797975	1	+	788684	797975	789624	22	151,195,153,167,93,53,142,210,98,124,152,94,99,131,148,225,150,131,145,132,58,137,	0,306,585,924,1552,1722,1900,2536,3226,3599,3814,4093,4341,4519,5429,6507,7060,7322,8092,8336,9069,9214,
#Deleted in new
chr16	788624	793190	chr16:788624-793190	0	+	788684	792460	789624	14	151,198,151,169,93,53,142,210,98,144,152,94,99,47,	0,303,585,922,1552,1722,1900,2536,3226,3599,3814,4093,4341,4519,
#Deleted in new
chr16	788634	798072	chr16:788634-798072	0	+	788634	788634	8553170	19	141,195,151,169,263,53,1823,152,94,99,131,148,225,150,131,145,132,58,234,	0,296,575,912,1372,1712,1890,3804,4083,4331,4509,5419,6497,7050,7312,8082,8326,9059,9204,
#Deleted in new
chr16	789213	791370	chr16:789213-791370	0	+	789213	789213	8553170	6	147,169,93,53,147,210,	0,333,963,1133,1311,1947,
#Deleted in new
chr16	789312	791370	chr16:789312-791370	0	+	789312	791370	789624	7	48,169,75,93,53,142,210,	0,234,694,864,1034,1212,1848,
#Deleted in new
chr16	789318	790549	chr16:789318-790549	0	+	789318	789318	8553170	4	397,93,53,25,	0,858,1028,1206,
#Deleted in new
chr16	790250	793006	chr16:790250-793006	0	+	790250	791191	789624	7	19,53,142,210,152,94,41,	0,96,274,910,2188,2467,2715,
#Deleted in new
chr16	790698	791879	chr16:790698-791879	0	+	790698	790698	8553170	2	672,29,	0,1152,
#Deleted in new
chr16	791136	792814	chr16:791136-792814	0	+	791136	791136	8553170	4	234,124,152,97,	0,1087,1302,1581,
#Deleted in new
chr16	792523	795720	chr16:792523-795720	0	+	792523	792523	8553170	7	67,94,99,131,162,225,36,	0,194,442,620,1516,2608,3161,
#Deleted in new
chr16	794701	796758	chr16:794701-796758	0	+	794701	794701	8553170	5	143,225,150,131,42,	0,430,983,1245,2015,
#Deleted in new
chr16	796614	798074	chr16:796614-798074	0	+	796614	796614	8553170	4	247,132,58,236,	0,346,1079,1224,
#Deleted in new
chr16	798040	800733	chr16:798040-800733	3	-	798718	799077	789624	3	784,132,68,	0,939,2625,
#Deleted in new
chr16	798040	800737	chr16:798040-800737	0	+	798040	798040	8553170	2	146,51,	0,2646,
#Deleted in new
chr16	848524	849065	chr16:848524-849065	3	-	848524	848524	8553170	1	541,	0,
#Partially deleted in new
chr16	853633	970999	chr16:853633-970999	3	-	854531	970980	789624	11	1073,113,184,154,181,168,66,149,11,310,212,	0,15310,16249,17095,17527,25936,39373,57297,80610,100723,117154,
#Partially deleted in new
chr16	853637	981318	chr16:853637-981318	0	-	931692	954532	789624	12	1069,113,184,154,181,168,66,149,152,11,310,174,	0,15306,16245,17091,17523,25932,39369,57293,78004,80606,100719,127507,
#Partially deleted in new
chr16	853642	970960	chr16:853642-970960	1	-	854531	893024	789624	8	1064,113,184,154,181,168,66,173,	0,15301,16240,17086,17518,25927,39364,117145,
#Partially deleted in new
chr16	854499	868968	chr16:854499-868968	0	-	855630	868968	789624	3	207,949,25,	0,607,14444,
#Partially deleted in new
chr16	854499	873860	chr16:854499-873860	0	-	854499	854499	8553170	5	207,113,184,154,2700,	0,14444,15383,16229,16661,
#Deleted in new
chr16	854500	855948	chr16:854500-855948	0	-	854500	854500	8553170	1	1448,	0,
#Partially deleted in new
chr16	854511	970866	chr16:854511-970866	1	-	854531	910942	789624	10	195,113,184,154,181,168,66,149,314,79,	0,14432,15371,16217,16649,25058,38495,56419,99841,116276,
#Deleted in new
chr16	869179	870749	chr16:869179-870749	0	-	869179	869179	8553170	3	370,184,21,	0,703,1549,
#Partially deleted in new
chr16	870832	887131	chr16:870832-887131	0	-	870832	870832	8553170	4	50,181,168,179,	0,328,8737,16120,
#Partially deleted in new
chr16	870873	893252	chr16:870873-893252	0	-	870873	870873	8553170	4	9,181,168,246,	0,287,8696,22133,
#Partially deleted in new
chr16	871286	947644	chr16:871286-947644	0	-	871286	947401	789624	6	55,168,66,149,11,245,	0,8283,21720,39644,62957,76113,
#Partially deleted in new
chr16	871316	981297	chr16:871316-981297	0	-	871316	954532	789624	7	25,168,66,149,11,310,153,	0,8253,21690,39614,62927,83040,109828,
#Partially deleted in new
chr16	879687	970982	chr16:879687-970982	0	-	934104	970980	789624	8	50,66,149,152,155,11,310,195,	0,13319,31243,51954,54303,54556,74669,91100,
#Partially deleted in new
chr16	881418	970963	chr16:881418-970963	0	-	934235	970963	789624	6	87,66,149,65,310,176,	0,11588,29512,52771,72938,89369,
#Partially deleted in new
chr16	883779	885090	chr16:883779-885090	3	+	883779	883779	8553170	2	382,148,	0,1163,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	898966	905224	chr16:898966-905224	3	-	898966	898966	8553170	3	3612,810,306,	0,4262,5952,
#Partially deleted in new
chr16	910979	964122	chr16:910979-964122	0	-	934235	964122	789624	4	100,65,310,76,	0,23210,43377,53067,
#Partially deleted in new
chr16	911015	970910	chr16:911015-970910	0	-	934104	970910	789624	5	64,155,11,310,123,	0,22975,23228,43341,59772,
#Partially deleted in new
chr16	921032	934266	chr16:921032-934266	0	+	921032	921032	789624	2	135,929,	0,12305,
#Partially deleted in new
chr16	921072	934495	chr16:921072-934495	3	+	921072	921072	789624	3	95,155,1158,	0,12028,12265,
#Partially deleted in new
chr16	952574	970982	chr16:952574-970982	0	-	952574	952574	8553170	3	68,310,195,	0,1782,18213,
#Deleted in new
chr16	968374	969012	chr16:968374-969012	3	-	968374	968374	8553170	1	638,	0,
#Deleted in new
chr16	975760	980913	chr16:975760-980913	0	-	975760	975760	8553170	2	1333,1889,	0,3264,
#Deleted in new
chr16	975760	976926	chr16:975760-976926	0	-	975760	975760	8553170	2	235,149,	0,1017,
#Deleted in new
chr16	975760	981596	chr16:975760-981596	0	-	975760	975760	8553170	2	1269,2457,	0,3379,
#Deleted in new
chr16	975760	976912	chr16:975760-976912	0	-	975760	975760	8553170	3	235,74,135,	0,566,1017,
#Deleted in new
chr16	975760	981590	chr16:975760-981590	3	-	975760	975760	8553170	3	640,252,2451,	0,1017,3379,
#Deleted in new
chr16	975763	981298	chr16:975763-981298	1	-	975763	975763	789624	4	1330,86,158,154,	0,3261,3837,5381,
#Deleted in new
chr16	976520	981298	chr16:976520-981298	0	-	976520	976520	8553170	3	573,86,154,	0,2504,4624,
#Deleted in new
chr16	976786	981293	chr16:976786-981293	0	-	976786	976786	8553170	4	307,86,163,149,	0,2238,2814,4358,
#Deleted in new
chr16	981807	986979	chr16:981807-986979	3	+	981922	985386	789624	3	537,233,2279,	0,1920,2893,
#Deleted in new
chr16	982085	986978	chr16:982085-986978	0	+	982085	982085	8553170	2	1875,2278,	0,2615,
#Partially deleted in new
chr16	991150	1000926	chr16:991150-1000926	3	-	991150	991150	8553170	8	90,115,149,148,132,160,109,84,	0,91,714,5318,6792,9227,9582,9692,
#Deleted in new
chr16	996318	997907	chr16:996318-997907	1	-	996318	996318	8553170	2	298,246,	0,1343,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	1064092	1078673	chr16:1064092-1078673	3	-	1064092	1064092	5263520	4	2434,125,89,216,	0,2826,13531,14365,
#Deleted in new
chr16	1065239	1066502	chr16:1065239-1066502	3	+	1065239	1065239	8553170	2	243,636,	0,627,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	1066247	1073603	chr16:1066247-1073603	1	-	1066247	1066247	8553170	4	279,125,133,38,	0,671,6839,7318,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	1066375	1067236	chr16:1066375-1067236	0	-	1066375	1066375	8553170	2	151,318,	0,543,
#Deleted in new
chr16	1077721	1078731	chr16:1077721-1078731	0	-	1077721	1077721	8553170	1	1010,	0,
#Deleted in new
chr16	1078780	1080142	chr16:1078780-1080142	3	+	1078868	1079963	789624	1	1362,	0,
#Deleted in new
chr16	1090004	1096244	chr16:1090004-1096244	3	-	1093500	1094922	789624	5	590,555,219,174,89,	0,3492,4710,5610,6151,
#Deleted in new
chr16	1090516	1095647	chr16:1090516-1095647	1	-	1093500	1094922	789624	8	78,432,43,18,24,33,236,33,	0,2980,4055,4099,4121,4147,4181,5098,
#Deleted in new
chr16	1101259	1105461	chr16:1101259-1105461	7	-	1101259	1101259	16724991	4	214,104,74,483,	0,2020,2448,3719,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	1111626	1113399	chr16:1111626-1113399	3	+	1111626	1111626	8553170	1	1773,	0,
#Deleted in new
chr16	1148223	1148754	chr16:1148223-1148754	3	-	1148223	1148223	8553170	1	531,	0,
#Partially deleted in new
chr16	1153120	1221772	chr16:1153120-1221772	3	+	1153737	1220994	789624	35	350,317,112,134,98,160,316,93,790,449,152,186,118,156,91,209,381,101,124,69,185,127,126,90,193,18,152,110,134,71,79,122,442,161,1792,	0,599,41851,42311,42805,45494,47135,47595,48542,50889,51993,52983,53880,54154,54649,54892,55911,56914,57249,57462,57666,58047,58360,58595,58825,59390,60659,61851,62121,62402,63811,64798,65089,65849,66860,
#Partially deleted in new
chr16	1153240	1221771	chr16:1153240-1221771	1	+	1153737	1220994	789624	34	230,317,112,134,98,160,316,93,790,449,152,186,118,156,91,209,381,101,124,69,185,127,126,90,193,152,110,134,71,79,122,442,161,1791,	0,479,41731,42191,42685,45374,47015,47475,48422,50769,51873,52863,53760,54034,54529,54772,55791,56794,57129,57342,57546,57927,58240,58475,58705,60539,61731,62001,62282,63691,64678,64969,65729,66740,
#Partially deleted in new
chr16	1153240	1221771	chr16:1153240-1221771	1	+	1153737	1220994	789624	35	230,316,113,95,98,160,316,93,790,449,152,186,118,156,91,209,381,101,124,69,185,127,126,90,193,18,152,110,134,71,79,122,442,161,1791,	0,479,41730,42230,42685,45374,47015,47475,48422,50769,51873,52863,53760,54034,54529,54772,55791,56794,57129,57342,57546,57927,58240,58475,58705,59270,60539,61731,62001,62282,63691,64678,64969,65729,66740,
#Partially deleted in new
chr16	1153240	1221771	chr16:1153240-1221771	0	+	1153737	1213921	789624	35	230,316,113,134,98,160,316,93,790,449,152,186,118,156,91,209,381,101,124,69,185,127,126,90,131,18,152,110,134,71,79,122,442,128,1791,	0,479,41730,42191,42685,45374,47015,47475,48422,50769,51873,52863,53760,54034,54529,54772,55791,56794,57129,57342,57546,57927,58240,58475,58767,59270,60539,61731,62001,62282,63691,64678,64969,65762,66740,
#Partially deleted in new
chr16	1153240	1221771	chr16:1153240-1221771	0	+	1153737	1204094	789624	35	230,317,112,134,98,160,316,93,173,449,152,186,118,156,91,209,381,101,124,69,185,127,126,90,131,18,152,110,134,71,79,122,442,128,1791,	0,479,41731,42191,42685,45374,47015,47475,48422,50769,51873,52863,53760,54034,54529,54772,55791,56794,57129,57342,57546,57927,58240,58475,58767,59270,60539,61731,62001,62282,63691,64678,64969,65762,66740,
#Partially deleted in new
chr16	1153737	1221765	chr16:1153737-1221765	1	+	1153737	1220994	789624	33	299,112,134,98,160,316,93,790,449,152,186,118,156,91,209,381,101,124,69,185,127,126,90,193,152,110,134,71,79,122,442,161,1785,	0,41234,41694,42188,44877,46518,46978,47925,50272,51376,52366,53263,53537,54032,54275,55294,56297,56632,56845,57049,57430,57743,57978,58208,60042,61234,61504,61785,63194,64181,64472,65232,66243,
#Deleted in new
chr16	1156975	1157974	chr16:1156975-1157974	3	-	1156975	1156975	8553170	2	214,328,	0,671,
#Deleted in new
chr16	1159547	1160176	chr16:1159547-1160176	3	-	1159547	1159547	8553170	2	430,46,	0,583,
#Deleted in new
chr16	1195028	1198934	chr16:1195028-1198934	0	+	1195028	1195028	8553170	4	55,134,98,320,	0,403,897,3586,
#Deleted in new
chr16	1206559	1207124	chr16:1206559-1207124	3	-	1206559	1206559	8553170	2	230,108,	0,457,
#Deleted in new
chr16	1209355	1211294	chr16:1209355-1211294	0	+	1209355	1210643	789624	6	107,101,124,69,185,127,	0,679,1014,1227,1431,1812,
#Deleted in new
chr16	1210066	1221084	chr16:1210066-1221084	0	+	1210066	1220994	789624	17	69,124,69,185,127,126,90,193,152,110,134,71,79,122,442,128,1104,	0,303,516,720,1101,1414,1649,1879,3713,4905,5175,5456,6865,7852,8143,8936,9914,
#Deleted in new
chr16	1210066	1221084	chr16:1210066-1221084	0	+	1210066	1220994	789624	18	69,124,69,185,127,126,90,193,18,152,110,134,71,79,122,442,128,1104,	0,303,516,720,1101,1414,1649,1879,2444,3713,4905,5175,5456,6865,7852,8143,8936,9914,
#Deleted in new
chr16	1210066	1221084	chr16:1210066-1221084	0	+	1210066	1220994	789624	17	69,124,69,185,127,126,90,226,152,110,134,71,79,122,442,161,1104,	0,303,516,720,1101,1414,1649,1879,3713,4905,5175,5456,6865,7852,8143,8903,9914,
#Deleted in new
chr16	1210607	1211448	chr16:1210607-1211448	0	+	1210607	1210607	8553170	3	44,185,281,	0,179,560,
#Deleted in new
chr16	1221650	1225257	chr16:1221650-1225257	3	-	1221787	1225252	789624	6	446,146,266,172,27,51,	0,545,1001,1772,2951,3556,
#Deleted in new
chr16	1222658	1224775	chr16:1222658-1224775	0	-	1222658	1222658	8553170	3	259,172,174,	0,764,1943,
#Deleted in new
chr16	1223638	1224143	chr16:1223638-1224143	3	+	1223638	1223638	8553170	1	505,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	1227271	1230184	chr16:1227271-1230184	0	-	1227735	1229951	789624	8	198,165,161,164,266,172,61,23,	0,354,1382,1628,1919,2294,2619,2890,
#Deleted in new
chr16	1228335	1230184	chr16:1228335-1230184	1	-	1228649	1229951	0	6	479,164,266,172,61,23,	0,564,855,1230,1555,1826,
#Deleted in new
chr16	1228336	1230162	chr16:1228336-1230162	3	-	1228649	1229972	789624	5	478,164,266,172,272,	0,563,854,1229,1554,
#Deleted in new
chr16	1240695	1242554	chr16:1240695-1242554	3	+	1240938	1242240	0	6	33,61,172,266,164,479,	0,243,457,738,1131,1380,
#Deleted in new
chr16	1240723	1242554	chr16:1240723-1242554	1	+	1240917	1242240	789624	5	276,172,266,164,479,	0,429,710,1103,1352,
#Deleted in new
chr16	1240937	1242093	chr16:1240937-1242093	0	+	1240937	1240937	8553170	4	62,172,557,18,	0,215,496,1138,
#Deleted in new
chr16	1241250	1242516	chr16:1241250-1242516	0	+	1241250	1242240	789624	4	74,239,164,441,	0,210,576,825,
#Deleted in new
chr16	1256058	1258531	chr16:1256058-1258531	1	+	1256301	1258376	789624	6	33,61,172,266,164,200,	0,243,457,738,2000,2273,
#Deleted in new
chr16	1256132	1258998	chr16:1256132-1258998	3	+	1256280	1258376	789624	5	230,172,266,164,667,	0,383,664,1926,2199,
#Deleted in new
chr16	1257338	1258074	chr16:1257338-1258074	3	+	1257338	1257338	8553170	2	115,134,	0,602,
#Partially deleted in new
chr16	1260951	1263845	chr16:1260951-1263845	7	-	1260951	1260951	16724991	4	511,164,148,1041,	0,594,1611,1853,
#Partially deleted in new
chr16	1261421	1262997	chr16:1261421-1262997	5	-	1261421	1261421	16724991	4	43,157,208,187,	0,129,1041,1389,
#Partially deleted in new
chr16	1273750	1276522	chr16:1273750-1276522	7	-	1273750	1273750	16724991	3	45,90,195,	0,2378,2577,
#Deleted in new
chr16	1280160	1280544	chr16:1280160-1280544	7	-	1280160	1280160	16724991	2	137,162,	0,222,
#Partially deleted in new
chr16	1286350	1288837	chr16:1286350-1288837	7	-	1286350	1286350	16724991	4	162,142,146,160,	0,282,1895,2327,
#Partially deleted in new
chr16	1294550	1299166	chr16:1294550-1299166	3	-	1294550	1294550	8553170	3	100,149,71,	0,4292,4545,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	1305546	1309413	chr16:1305546-1309413	3	-	1305546	1305546	8553170	1	3867,	0,
#Partially deleted in new
chr16	1308879	1327018	chr16:1308879-1327018	3	+	1314030	1324793	0	7	540,77,84,73,110,80,2289,	0,5140,5413,6774,11294,11558,15850,
#Partially deleted in new
chr16	1309152	1327018	chr16:1309152-1327018	1	+	1314030	1324793	0	7	119,77,84,73,110,80,2289,	0,4867,5140,6501,11021,11285,15577,
#Partially deleted in new
chr16	1309509	1327017	chr16:1309509-1327017	1	+	1314030	1324793	0	7	264,77,84,73,110,80,2288,	0,4510,4783,6144,10664,10928,15220,
#Partially deleted in new
chr16	1309634	1327018	chr16:1309634-1327018	1	+	1314030	1324793	0	8	139,257,77,84,73,110,80,2289,	0,2712,4385,4658,6019,10539,10803,15095,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	1309635	1317125	chr16:1309635-1317125	0	+	1309635	1309635	8553170	4	138,77,84,1472,	0,4384,4657,6018,
#Partially deleted in new
chr16	1309647	1324753	chr16:1309647-1324753	0	+	1309647	1309647	8553170	6	126,84,77,110,80,24,	0,4645,6006,10526,10790,15082,
#Partially deleted in new
chr16	1309655	1314314	chr16:1309655-1314314	0	+	1314030	1314314	789624	4	118,321,77,22,	0,2691,4364,4637,
#Partially deleted in new
chr16	1309677	1325214	chr16:1309677-1325214	1	+	1314030	1324793	0	8	96,212,77,84,73,110,80,485,	0,2669,4342,4615,5976,10496,10760,15052,
#Partially deleted in new
chr16	1309698	1320210	chr16:1309698-1320210	0	+	1309698	1309698	8553170	4	75,77,77,37,	0,4321,5955,10475,
#Partially deleted in new
chr16	1309757	1314934	chr16:1309757-1314934	0	+	1309757	1309757	8553170	3	16,77,642,	0,4262,4535,
#Partially deleted in new
chr16	1309802	1324952	chr16:1309802-1324952	1	+	1314030	1324793	0	7	451,77,84,73,110,80,223,	0,4217,4490,5851,10371,10635,14927,
#Partially deleted in new
chr16	1311870	1325350	chr16:1311870-1325350	1	+	1314030	1324793	0	7	797,77,84,73,110,80,621,	0,2149,2422,3783,8303,8567,12859,
#Partially deleted in new
chr16	1312184	1314033	chr16:1312184-1314033	0	+	1314030	1314033	8553170	2	419,14,	0,1835,
#Partially deleted in new
chr16	1313559	1320517	chr16:1313559-1320517	0	+	1314030	1320517	789624	5	537,84,73,110,80,	0,733,2094,6614,6878,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	1313994	1321776	chr16:1313994-1321776	1	+	1314030	1320659	789624	5	102,84,73,110,1339,	0,298,1659,6179,6443,
#Partially deleted in new
chr16	1314044	1320199	chr16:1314044-1320199	0	+	1314044	1319703	789624	5	52,84,73,161,26,	0,248,1609,5657,6129,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	1314548	1317190	chr16:1314548-1317190	0	+	1314548	1314548	8553170	1	2642,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	1317890	1322845	chr16:1317890-1322845	3	-	1317890	1317890	8553170	2	2568,358,	0,4597,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	1319254	1322827	chr16:1319254-1322827	1	-	1319254	1319254	8553170	2	2657,450,	0,3123,
#Partially deleted in new
chr16	1319880	1324744	chr16:1319880-1324744	0	+	1319880	1319880	8553170	3	403,80,15,	0,557,4849,
#Partially deleted in new
chr16	1329077	1329777	chr16:1329077-1329777	7	+	1329077	1329077	16724991	2	269,120,	0,580,
#Partially deleted in new
chr16	1333600	1348794	chr16:1333600-1348794	1	+	1338549	1348482	789624	34	149,141,88,81,108,60,67,196,45,78,103,108,96,104,121,125,91,57,98,52,131,124,144,93,192,69,80,109,72,81,121,124,206,416,	0,4939,5301,5563,5895,7321,7528,7693,8221,8385,8580,8926,9118,9312,9792,10421,10626,10868,11000,11197,11368,11648,12146,12385,12569,12841,13004,13246,13697,13944,14100,14293,14495,14778,
#Partially deleted in new
chr16	1333637	1339386	chr16:1333637-1339386	0	+	1333637	1333637	8553170	4	112,141,88,223,	0,4902,5264,5526,
#Partially deleted in new
chr16	1333642	1349438	chr16:1333642-1349438	1	+	1338549	1348482	789624	34	107,141,88,132,108,60,67,196,45,78,103,108,96,104,121,125,91,57,98,52,131,124,144,93,192,69,80,109,72,81,121,124,206,1060,	0,4897,5259,5470,5853,7279,7486,7651,8179,8343,8538,8884,9076,9270,9750,10379,10584,10826,10958,11155,11326,11606,12104,12343,12527,12799,12962,13204,13655,13902,14058,14251,14453,14736,
#Partially deleted in new
chr16	1333644	1348640	chr16:1333644-1348640	1	+	1338549	1348482	789624	34	105,141,88,81,39,60,67,196,45,78,103,108,96,104,121,125,91,57,98,52,131,124,144,93,192,69,80,109,72,81,121,124,206,262,	0,4895,5257,5519,5920,7277,7484,7649,8177,8341,8536,8882,9074,9268,9748,10377,10582,10824,10956,11153,11324,11604,12102,12341,12525,12797,12960,13202,13653,13900,14056,14249,14451,14734,
#Partially deleted in new
chr16	1333644	1348755	chr16:1333644-1348755	1	+	1338549	1348482	789624	34	105,141,88,81,24,60,67,196,45,78,103,108,96,104,121,125,91,57,98,52,131,124,144,93,192,69,80,109,72,81,121,124,206,377,	0,4895,5257,5519,5935,7277,7484,7649,8177,8341,8536,8882,9074,9268,9748,10377,10582,10824,10956,11153,11324,11604,12102,12341,12525,12797,12960,13202,13653,13900,14056,14249,14451,14734,
#Partially deleted in new
chr16	1334503	1349438	chr16:1334503-1349438	3	+	1334661	1348482	789624	34	253,141,88,81,108,60,67,196,45,78,103,108,96,104,121,125,91,57,98,52,131,124,144,93,192,69,80,109,72,81,121,124,206,1060,	0,4036,4398,4660,4992,6418,6625,6790,7318,7482,7677,8023,8215,8409,8889,9518,9723,9965,10097,10294,10465,10745,11243,11482,11666,11938,12101,12343,12794,13041,13197,13390,13592,13875,
#Partially deleted in new
chr16	1334503	1342421	chr16:1334503-1342421	0	+	1334503	1334503	8553170	11	253,141,88,132,108,60,67,196,45,78,241,	0,4036,4398,4609,4992,6418,6625,6790,7318,7482,7677,
#Partially deleted in new
chr16	1334503	1349441	chr16:1334503-1349441	1	+	1338549	1348482	789624	34	253,141,88,132,108,60,67,196,45,78,103,108,96,104,121,125,91,57,98,52,131,124,144,93,192,69,80,109,72,81,121,124,206,1063,	0,4036,4398,4609,4992,6418,6625,6790,7318,7482,7677,8023,8215,8409,8889,9518,9723,9965,10097,10294,10465,10745,11243,11482,11666,11938,12101,12343,12794,13041,13197,13390,13592,13875,
#Partially deleted in new
chr16	1336196	1348793	chr16:1336196-1348793	1	+	1338549	1348482	789624	33	203,141,88,81,108,60,67,196,45,78,103,96,104,121,125,91,57,98,52,131,124,144,93,192,69,80,109,72,81,121,124,206,415,	0,2343,2705,2967,3299,4725,4932,5097,5625,5789,5984,6522,6716,7196,7825,8030,8272,8404,8601,8772,9052,9550,9789,9973,10245,10408,10650,11101,11348,11504,11697,11899,12182,
#Deleted in new
chr16	1343317	1345073	chr16:1343317-1345073	0	+	1343317	1343317	8553170	6	196,296,57,98,52,105,	0,704,1151,1283,1480,1651,
#Deleted in new
chr16	1344667	1349438	chr16:1344667-1349438	0	+	1344667	1349392	789624	8	31,52,131,124,144,93,51,73,	0,130,301,581,1079,1318,1502,4698,
#Deleted in new
chr16	1345417	1346225	chr16:1345417-1346225	0	+	1345417	1345417	8553170	3	473,93,56,	0,568,752,
#Deleted in new
chr16	1346008	1347610	chr16:1346008-1347610	0	+	1346008	1347610	789624	7	70,192,69,80,22,72,66,	0,161,433,596,925,1289,1536,
#Deleted in new
chr16	1346237	1347358	chr16:1346237-1347358	0	+	1346237	1346237	8553170	4	124,69,80,61,	0,204,367,1060,
#Deleted in new
chr16	1346458	1347091	chr16:1346458-1347091	0	+	1346458	1346458	8553170	2	52,487,	0,146,
#Deleted in new
chr16	1346718	1348301	chr16:1346718-1348301	0	+	1346718	1346718	8553170	6	237,72,81,121,124,206,	0,579,826,982,1175,1377,
#Deleted in new
chr16	1349239	1351911	chr16:1349239-1351911	3	-	1349436	1351804	789624	6	369,64,177,194,220,219,	0,649,818,1567,2139,2453,
#Deleted in new
chr16	1349425	1351473	chr16:1349425-1351473	0	-	1350194	1351473	789624	4	183,177,194,95,	0,632,1381,1953,
#Partially deleted in new
chr16	1351922	1364113	chr16:1351922-1364113	3	+	1351965	1363091	789624	11	95,58,68,55,84,94,115,83,132,82,1117,	0,179,316,9820,9949,10115,10283,10529,10688,10902,11074,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	1351930	1362124	chr16:1351930-1362124	0	+	1351965	1357752	789624	7	87,58,68,133,55,84,87,	0,171,308,5769,9812,9941,10107,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	1351943	1358417	chr16:1351943-1358417	0	+	1351965	1357752	789624	5	74,58,68,133,217,	0,158,295,5756,6257,
#Partially deleted in new
chr16	1351945	1362906	chr16:1351945-1362906	0	+	1351945	1351945	8553170	9	72,205,55,84,94,115,83,132,82,	0,156,9797,9926,10092,10260,10506,10665,10879,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	1351947	1357844	chr16:1351947-1357844	0	+	1351947	1351947	8553170	3	70,205,145,	0,154,5752,
#Deleted in new
chr16	1351950	1352499	chr16:1351950-1352499	1	+	1351965	1352314	789624	3	67,58,261,	0,151,288,
#Partially deleted in new
chr16	1351953	1363323	chr16:1351953-1363323	0	+	1351953	1351953	8553170	8	64,205,84,94,329,132,82,327,	0,148,9918,10084,10252,10657,10871,11043,
#Partially deleted in new
chr16	1351982	1362279	chr16:1351982-1362279	0	+	1351982	1362279	789624	6	177,68,55,84,94,74,	0,256,9760,9889,10055,10223,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	1358899	1361405	chr16:1358899-1361405	3	-	1358899	1358899	8553170	2	76,359,	0,2147,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	1360622	1363350	chr16:1360622-1363350	0	+	1360622	1360622	8553170	5	1333,94,537,82,354,	0,1415,1583,2202,2374,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	1363204	1379683	chr16:1363204-1379683	1	-	1366239	1370006	789624	6	3191,258,203,424,93,151,	0,3887,4451,6729,8314,16328,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	1363204	1414720	chr16:1363204-1414720	1	-	1366239	1414691	789624	15	3191,108,203,228,93,178,63,86,85,118,136,134,177,210,106,	0,4037,4451,6925,8314,22003,27427,29686,30926,33973,36169,38363,39963,50641,51410,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	1363205	1379645	chr16:1363205-1379645	0	-	1370052	1370211	789624	6	3190,258,203,424,93,113,	0,3886,4450,6728,8313,16327,
#Partially deleted in new
chr16	1364173	1366148	chr16:1364173-1366148	0	-	1364173	1364173	8553170	2	82,131,	0,1844,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	1364998	1379683	chr16:1364998-1379683	1	-	1366239	1370211	789624	6	1397,108,203,228,93,151,	0,2243,2657,5131,6520,14534,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	1365011	1414691	chr16:1365011-1414691	3	-	1366239	1414691	789624	15	1384,258,203,228,93,178,63,86,85,118,136,134,177,210,77,	0,2080,2644,5118,6507,20196,25620,27879,29119,32166,34362,36556,38156,48834,49603,
#Deleted in new
chr16	1366277	1368203	chr16:1366277-1368203	0	-	1366277	1366277	8553170	3	118,258,548,	0,814,1378,
#Partially deleted in new
chr16	1367291	1379680	chr16:1367291-1379680	0	-	1367291	1370211	789624	5	58,203,228,93,87,	0,364,2838,4227,12302,
#Partially deleted in new
chr16	1367712	1379121	chr16:1367712-1379121	0	-	1367712	1370211	789624	3	146,228,208,	0,2417,11201,
#Partially deleted in new
chr16	1370232	1379176	chr16:1370232-1379176	0	-	1370232	1370232	8553170	3	125,93,263,	0,1286,8681,
#Partially deleted in new
chr16	1394130	1414697	chr16:1394130-1414697	0	-	1403234	1414691	789624	7	85,118,136,134,177,164,83,	0,3047,5243,7437,9037,19715,20484,
#Partially deleted in new
chr16	1397044	1399508	chr16:1397044-1399508	0	-	1397044	1397044	8553170	2	251,135,	0,2329,
#Partially deleted in new
chr16	1398304	1414751	chr16:1398304-1414751	1	-	1398841	1414691	789624	6	637,136,134,177,210,137,	0,1069,3263,4863,15541,16310,
#Partially deleted in new
chr16	1399139	1403190	chr16:1399139-1403190	0	-	1399139	1399139	8553170	3	370,134,23,	0,2428,4028,
#Partially deleted in new
chr16	1401336	1414695	chr16:1401336-1414695	0	-	1401336	1401336	8553170	5	140,134,177,210,81,	0,231,1831,12509,13278,
#Partially deleted in new
chr16	1403207	1414078	chr16:1403207-1414078	0	-	1403207	1403207	8553170	2	137,233,	0,10638,
#Partially deleted in new
chr16	1403236	1407341	chr16:1403236-1407341	0	-	1403236	1403236	8553170	2	108,75,	0,4030,
#Partially deleted in new
chr16	1408833	1412248	chr16:1408833-1412248	3	+	1408833	1408833	8553170	2	59,320,	0,3095,
#Deleted in new
chr16	1419743	1420800	chr16:1419743-1420800	3	-	1420245	1420723	789624	2	869,109,	0,948,
#Deleted in new
chr16	1419751	1420756	chr16:1419751-1420756	0	-	1419751	1419751	8553170	1	1005,	0,
#Deleted in new
chr16	1431034	1433397	chr16:1431034-1433397	3	+	1432593	1433397	789624	2	74,851,	0,1512,
#Partially deleted in new
chr16	1434382	1437903	chr16:1434382-1437903	0	-	1435159	1437903	789624	6	152,185,87,77,120,87,	0,285,706,2062,2309,3434,
#Partially deleted in new
chr16	1434387	1444489	chr16:1434387-1444489	3	-	1434407	1444322	789624	17	147,185,81,118,77,120,138,127,121,154,102,124,96,41,190,217,174,	0,280,701,1581,2057,2304,3429,3662,4231,4402,4637,8018,8492,8873,9118,9408,9928,
#Partially deleted in new
chr16	1434387	1444556	chr16:1434387-1444556	1	-	1434407	1443280	789624	16	147,185,87,118,77,120,138,127,119,129,102,124,96,41,190,761,	0,280,701,1581,2057,2304,3429,3662,4231,4427,4637,8018,8492,8873,9118,9408,
#Deleted in new
chr16	1434387	1435308	chr16:1434387-1435308	0	-	1434387	1434387	8553170	3	147,102,220,	0,363,701,
#Deleted in new
chr16	1437153	1439315	chr16:1437153-1439315	3	+	1437153	1437153	8553170	1	2162,	0,
#Partially deleted in new
chr16	1444933	1451969	chr16:1444933-1451969	0	-	1444933	1444933	8553170	9	1784,81,177,60,130,86,128,1391,347,	0,2072,2458,2721,3421,3747,4032,4342,6689,
#Partially deleted in new
chr16	1444934	1475580	chr16:1444934-1475580	3	-	1446630	1474974	789624	25	1783,81,177,60,130,86,128,52,170,94,139,61,55,117,65,94,84,63,81,110,133,66,72,72,747,	0,2071,2457,2720,3420,3746,4031,4341,5562,6688,7820,8899,9476,10199,10796,11178,12319,12759,14172,15483,15881,16470,16668,20332,29899,
#Partially deleted in new
chr16	1444935	1475084	chr16:1444935-1475084	1	-	1446630	1474974	789624	24	1782,81,177,60,130,86,128,52,170,94,139,61,55,117,65,94,84,63,81,110,133,66,72,251,	0,2070,2456,2719,3419,3745,4030,4340,5561,6687,7819,8898,9475,10198,10795,11177,12318,12758,14171,15482,15880,16469,16667,29898,
#Deleted in new
chr16	1445342	1446519	chr16:1445342-1446519	3	+	1445342	1445342	8553170	2	514,610,	0,567,
#Partially deleted in new
chr16	1445343	1475057	chr16:1445343-1475057	1	-	1446271	1474974	789624	24	1374,78,181,60,130,86,128,52,170,94,139,61,55,117,65,94,84,63,81,110,133,66,72,224,	0,1662,2044,2311,3011,3337,3622,3932,5153,6279,7411,8490,9067,9790,10387,10769,11910,12350,13763,15074,15472,16061,16259,29490,
#Deleted in new
chr16	1445343	1449797	chr16:1445343-1449797	0	-	1445343	1445343	8553170	7	1374,81,177,60,130,86,832,	0,1662,2048,2311,3011,3337,3622,
#Deleted in new
chr16	1446642	1448608	chr16:1446642-1448608	0	-	1446642	1446642	8553170	5	75,81,177,60,254,	0,363,749,1012,1712,
#Deleted in new
chr16	1448291	1449263	chr16:1448291-1449263	0	-	1448291	1448291	8553170	3	193,86,298,	0,389,674,
#Deleted in new
chr16	1451759	1452653	chr16:1451759-1452653	3	+	1451759	1451759	8553170	2	183,387,	0,507,
#Partially deleted in new
chr16	1455491	1459412	chr16:1455491-1459412	0	-	1455491	1455491	8553170	5	304,94,84,63,306,	0,621,1762,2202,3615,
#Partially deleted in new
chr16	1457253	1471956	chr16:1457253-1471956	0	-	1457253	1465305	789624	9	84,63,81,110,133,66,72,72,333,	0,440,1853,3164,3562,4151,4349,8013,14370,
#Deleted in new
chr16	1457328	1459330	chr16:1457328-1459330	0	-	1457328	1457328	8553170	2	428,224,	0,1778,
#Partially deleted in new
chr16	1460768	1475076	chr16:1460768-1475076	0	-	1460768	1460768	8553170	4	180,66,72,243,	0,636,834,14065,
#Partially deleted in new
chr16	1460769	1475025	chr16:1460769-1475025	0	-	1460769	1460769	8553170	5	179,66,72,72,192,	0,635,833,4497,14064,
#Partially deleted in new
chr16	1460838	1474365	chr16:1460838-1474365	0	-	1460838	1474188	789624	5	110,66,72,72,213,	0,566,764,4428,13314,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	1466598	1475077	chr16:1466598-1475077	0	-	1466598	1466598	8553170	2	190,244,	0,8235,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	1467672	1472684	chr16:1467672-1472684	3	-	1467672	1467672	8553170	2	152,155,	0,4857,
#Deleted in new
chr16	1477829	1478583	chr16:1477829-1478583	7	+	1477829	1477829	16724991	1	754,	0,
#Deleted in new
chr16	1485885	1488981	chr16:1485885-1488981	1	-	1486351	1488909	789624	3	694,210,213,	0,1875,2883,
#Deleted in new
chr16	1485885	1488935	chr16:1485885-1488935	1	-	1485938	1488909	789624	3	694,655,167,	0,1430,2883,
#Deleted in new
chr16	1485938	1488467	chr16:1485938-1488467	3	-	1485938	1488467	789624	3	641,655,126,	0,1377,2403,
#Partially deleted in new
chr16	1493343	1507325	chr16:1493343-1507325	0	+	1494281	1506326	789624	12	262,336,278,69,148,103,69,142,83,57,100,20,	0,937,2002,3692,4017,5887,6752,7003,7219,12929,13608,13962,
#Partially deleted in new
chr16	1493362	1510457	chr16:1493362-1510457	3	+	1494281	1509936	0	21	243,371,278,69,148,103,69,142,137,80,111,89,92,117,72,192,92,100,65,116,628,	0,883,1983,3673,3998,5868,6733,6984,7200,8057,8300,8684,8950,9282,9568,12047,12875,13589,13943,14238,16467,
#Partially deleted in new
chr16	1501706	1506665	chr16:1501706-1506665	0	+	1501706	1501706	8553170	8	67,89,92,117,72,192,92,182,	0,340,606,938,1224,3703,4531,4777,
#Partially deleted in new
chr16	1501764	1506262	chr16:1501764-1506262	0	+	1501764	1506262	789624	6	9,89,92,72,192,25,	0,282,548,1166,3645,4473,
#Partially deleted in new
chr16	1502961	1506779	chr16:1502961-1506779	0	+	1502961	1502961	8553170	4	41,192,105,296,	0,2448,3263,3522,
#Partially deleted in new
chr16	1505138	1506971	chr16:1505138-1506971	0	+	1505138	1505138	8553170	3	463,92,20,	0,1099,1813,
#Partially deleted in new
chr16	1505440	1506631	chr16:1505440-1506631	0	+	1505440	1505440	8553170	2	161,394,	0,797,
#Partially deleted in new
chr16	1506533	1510457	chr16:1506533-1510457	0	+	1506533	1506533	8553170	4	518,65,116,628,	0,772,1067,3296,
#Partially deleted in new
chr16	1510426	1533494	chr16:1510426-1533494	1	-	1510943	1526777	789624	13	724,142,167,213,207,183,129,144,133,96,191,178,480,	0,7789,9454,9704,10175,13091,13401,14125,14357,14804,15460,16192,22588,
#Partially deleted in new
chr16	1510426	1612110	chr16:1510426-1612110	3	-	1510943	1607266	789624	31	724,142,167,213,207,183,129,144,133,96,191,178,200,132,166,131,118,128,92,73,204,146,107,92,176,143,122,222,178,190,143,	0,7789,9454,9704,10175,13091,13401,14125,14357,14804,15460,16192,47508,51558,53570,55734,57790,60980,70332,72887,73790,75703,76771,77506,79178,81749,82040,91943,96693,100237,101541,
#Partially deleted in new
chr16	1510429	1610693	chr16:1510429-1610693	0	-	1580834	1607266	789624	24	721,142,167,213,207,183,129,144,133,96,191,64,200,132,166,131,118,128,92,73,204,181,178,30,	0,7786,9451,9701,10172,13088,13398,14122,14354,14801,15457,16303,47505,51555,53567,55731,57787,60977,70329,72884,73787,91981,96690,100234,
#Partially deleted in new
chr16	1510429	1584263	chr16:1510429-1584263	0	-	1510429	1510429	8553170	19	721,142,167,213,207,183,868,133,96,910,200,132,166,131,118,128,92,73,47,	0,7786,9451,9701,10172,13088,13398,14354,14801,15457,47505,51555,53567,55731,57787,60977,70329,72884,73787,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	1512978	1514675	chr16:1512978-1514675	3	+	1512978	1512978	8553170	2	274,408,	0,1289,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	1518101	1520038	chr16:1518101-1520038	0	-	1518137	1520038	789624	2	256,158,	0,1779,
#Deleted in new
chr16	1524773	1527024	chr16:1524773-1527024	0	-	1524773	1524773	8553170	4	143,96,191,292,	0,457,1113,1959,
#Partially deleted in new
chr16	1528687	1555580	chr16:1528687-1555580	3	+	1534275	1555026	789624	4	109,622,156,799,	0,5246,13233,26094,
#Deleted in new
chr16	1530714	1533301	chr16:1530714-1533301	3	+	1530714	1530714	8553170	1	2587,	0,
#Partially deleted in new
chr16	1533572	1555580	chr16:1533572-1555580	1	+	1534275	1555026	789624	3	983,156,799,	0,8348,21209,
#Deleted in new
chr16	1553654	1554130	chr16:1553654-1554130	3	-	1553654	1553654	8553170	1	476,	0,
#Partially deleted in new
chr16	1553920	1610693	chr16:1553920-1610693	0	-	1553920	1553920	8553170	19	120,200,132,166,131,118,128,92,73,204,146,107,92,176,143,122,222,178,30,	0,4014,8064,10076,12240,14296,17486,26838,29393,30296,32209,33277,34012,35684,38255,38546,48449,53199,56743,
#Partially deleted in new
chr16	1557554	1564110	chr16:1557554-1564110	0	-	1557554	1557554	8553170	3	580,132,114,	0,4430,6442,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	1576715	1578371	chr16:1576715-1578371	3	-	1576715	1576715	8553170	1	1656,	0,
#Duplicated in new
chr16	1579241	1580308	chr16:1579241-1580308	3	-	1579241	1579241	8553170	2	278,126,	0,941,
#Partially deleted in new
chr16	1602266	1610704	chr16:1602266-1610704	0	-	1602266	1602266	8553170	3	325,178,41,	0,4853,8397,
#Partially deleted in new
chr16	1602376	1610666	chr16:1602376-1610666	0	-	1602376	1607266	789624	3	215,178,250,	0,4743,8040,
#Partially deleted in new
chr16	1602397	1610044	chr16:1602397-1610044	0	-	1602397	1607266	789624	3	194,178,80,	0,4722,7567,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr16	1612324	1677908	chr16:1612324-1677908	3	+	1614639	1674045	789624	21	98,347,194,154,84,49,86,124,82,1116,178,182,75,82,105,179,66,232,165,146,4028,	0,2314,13648,19887,25499,28814,40171,40708,42894,43552,47561,50165,50436,52732,53748,54097,55010,55637,56676,58339,61556,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr16	1614639	1677906	chr16:1614639-1677906	1	+	1614639	1674045	789624	20	346,194,154,84,49,86,124,82,1116,178,182,75,82,105,179,66,232,165,146,4026,	0,11333,17572,23184,26499,37856,38393,40579,41237,45246,47850,48121,50417,51433,51782,52695,53322,54361,56024,59241,
#Deleted in new
chr16	1625627	1626160	chr16:1625627-1626160	3	-	1625627	1625627	8553170	2	124,205,	0,328,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr16	1632258	1686715	chr16:1632258-1686715	3	+	1632258	1652560	789624	23	107,84,49,49,13,86,124,82,60,344,178,182,75,82,105,179,66,223,165,146,1819,149,959,	0,5565,8880,13116,14784,20237,20774,22960,23618,24390,27627,30231,30502,32798,33814,34163,35076,35703,36742,38405,41622,53180,53498,
#Partially deleted in new
chr16	1662461	1668063	chr16:1662461-1668063	0	+	1662461	1662461	8553170	4	210,82,179,102,	0,2595,3960,5500,
#Partially deleted in new
chr16	1662466	1666513	chr16:1662466-1666513	0	+	1662466	1662466	8553170	5	205,75,82,105,92,	0,294,2590,3606,3955,
#Partially deleted in new
chr16	1662604	1668108	chr16:1662604-1668108	0	+	1662604	1668108	789624	5	67,75,82,179,147,	0,156,2452,3817,5357,
#Partially deleted in new
chr16	1662698	1667365	chr16:1662698-1667365	0	+	1662698	1662698	8553170	5	137,82,105,179,31,	0,2358,3374,3723,4636,
#Deleted in new
chr16	1665775	1667417	chr16:1665775-1667417	0	+	1665775	1665775	8553170	3	402,179,83,	0,646,1559,
#Deleted in new
chr16	1670466	1673988	chr16:1670466-1673988	0	+	1670466	1670466	8553170	2	343,108,	0,3414,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	1678255	1702086	chr16:1678255-1702086	3	+	1678312	1698998	789624	5	101,149,143,49,3276,	0,7183,13587,19556,20555,
#Partially deleted in new
chr16	1678255	1699428	chr16:1678255-1699428	0	+	1678255	1678255	8553170	4	101,143,49,618,	0,13587,19556,20555,
#Partially deleted in new
chr16	1678275	1692469	chr16:1678275-1692469	0	+	1678275	1678275	8553170	3	81,149,627,	0,7163,13567,
#Partially deleted in new
chr16	1678276	1701490	chr16:1678276-1701490	1	+	1678312	1698998	789624	6	80,84,149,143,49,2680,	0,5232,7162,13566,19535,20534,
#Partially deleted in new
chr16	1678278	1699599	chr16:1678278-1699599	1	+	1678312	1697831	789624	4	78,149,49,789,	0,7160,19533,20532,
#Partially deleted in new
chr16	1678279	1699237	chr16:1678279-1699237	1	+	1685442	1698998	789624	6	42,84,149,143,49,427,	0,5229,7159,13563,19532,20531,
#Partially deleted in new
chr16	1678289	1700225	chr16:1678289-1700225	0	+	1678312	1700225	789624	6	67,149,143,49,33,152,	0,7149,13553,19522,20521,21784,
#Partially deleted in new
chr16	1678312	1698883	chr16:1678312-1698883	0	+	1678312	1685516	789624	6	44,112,149,143,49,73,	0,5196,7126,13530,19499,20498,
#Partially deleted in new
chr16	1678312	1699266	chr16:1678312-1699266	1	+	1678312	1697831	789624	5	44,84,149,49,456,	0,5196,7126,19499,20498,
#Partially deleted in new
chr16	1680336	1699269	chr16:1680336-1699269	1	+	1680490	1698998	789624	5	162,149,143,49,459,	0,5102,11506,17475,18474,
#Partially deleted in new
chr16	1680336	1698819	chr16:1680336-1698819	0	+	1685442	1698819	789624	5	251,149,143,49,9,	0,5102,11506,17475,18474,
#Partially deleted in new
chr16	1685380	1698976	chr16:1685380-1698976	0	+	1685442	1698976	789624	4	207,143,49,166,	0,6462,12431,13430,
#Partially deleted in new
chr16	1685478	1692442	chr16:1685478-1692442	0	+	1685478	1685478	8553170	3	109,143,45,	0,6364,6919,
#Partially deleted in new
chr16	1685499	1702280	chr16:1685499-1702280	0	+	1685499	1702173	789624	5	88,143,49,33,145,	0,6343,12312,13311,16636,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	1688354	1690536	chr16:1688354-1690536	3	+	1688354	1688354	8553170	1	2182,	0,
#Partially deleted in new
chr16	1706182	1770317	chr16:1706182-1770317	3	+	1706339	1768824	0	32	475,121,71,92,142,247,103,119,12,18,58,153,82,131,57,171,127,96,159,166,183,190,120,81,68,149,172,114,39,180,150,1615,	0,18374,22955,23304,37152,40846,42061,42419,51965,52795,53775,54197,55041,56168,56492,56653,57474,57932,58118,58830,59777,60037,60346,60540,60721,60966,61381,61622,61886,62016,62294,62520,
#Partially deleted in new
chr16	1706192	1769140	chr16:1706192-1769140	1	+	1706339	1768824	789624	31	465,121,71,92,142,247,103,119,12,58,153,82,131,57,171,127,96,159,166,183,190,120,81,68,149,172,114,39,180,150,438,	0,18364,22945,23294,37142,40836,42051,42409,51955,53765,54187,55031,56158,56482,56643,57464,57922,58108,58820,59767,60027,60336,60530,60711,60956,61371,61612,61876,62006,62284,62510,
#Partially deleted in new
chr16	1706219	1770316	chr16:1706219-1770316	1	+	1706339	1768824	789624	32	438,121,71,92,145,247,103,119,12,18,58,153,82,131,57,171,127,96,159,166,183,190,120,81,68,149,172,114,39,180,150,1614,	0,18337,22918,23267,37112,40809,42024,42382,51928,52758,53738,54160,55004,56131,56455,56616,57437,57895,58081,58793,59740,60000,60309,60503,60684,60929,61344,61585,61849,61979,62257,62483,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	1706240	1747069	chr16:1706240-1747069	0	+	1706240	1706240	8553170	5	417,121,71,92,3735,	0,18316,22897,23246,37094,
#Partially deleted in new
chr16	1706378	1747067	chr16:1706378-1747067	0	+	1706378	1706378	8553170	6	279,121,71,92,1772,39,	0,18178,22759,23108,36953,40650,
#Deleted in new
chr16	1707251	1707973	chr16:1707251-1707973	3	+	1707251	1707251	8553170	1	722,	0,
#Deleted in new
chr16	1713526	1714208	chr16:1713526-1714208	3	-	1713526	1713526	8553170	2	261,207,	0,475,
#Deleted in new
chr16	1734984	1735066	chr16:1734984-1735066	3	+	1734984	1734984	5263520	1	82,	0,
#Partially deleted in new
chr16	1744038	1748726	chr16:1744038-1748726	0	+	1744038	1744038	8553170	5	151,126,247,103,125,	0,939,2990,4205,4563,
#Partially deleted in new
chr16	1747067	1760343	chr16:1747067-1760343	0	+	1747067	1747275	789624	6	208,103,119,12,58,51,	0,1176,1534,11080,12890,13225,
#Partially deleted in new
chr16	1747067	1748800	chr16:1747067-1748800	0	+	1747067	1747067	8553170	3	208,103,199,	0,1176,1534,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	1751558	1752262	chr16:1751558-1752262	3	-	1751558	1751558	8553170	2	541,24,	0,680,
#Deleted in new
chr16	1759950	1764318	chr16:1759950-1764318	0	+	1759950	1759950	8553170	9	65,153,55,131,57,171,127,96,18,	0,429,1273,2400,2724,2885,3706,4164,4350,
#Deleted in new
chr16	1762892	1763896	chr16:1762892-1763896	0	+	1762892	1762892	8553170	2	114,240,	0,764,
#Deleted in new
chr16	1763921	1765053	chr16:1763921-1765053	0	+	1763921	1763921	8553170	3	289,159,41,	0,379,1091,
#Deleted in new
chr16	1766171	1766971	chr16:1766171-1766971	0	+	1766171	1766171	8553170	4	238,120,81,68,	0,357,551,732,
#Deleted in new
chr16	1766833	1767340	chr16:1766833-1767340	0	+	1766833	1766833	8553170	2	138,192,	0,315,
#Deleted in new
chr16	1767157	1768551	chr16:1767157-1768551	0	+	1767157	1767157	8553170	5	140,172,303,180,75,	0,406,647,1041,1319,
#Deleted in new
chr16	1767266	1767846	chr16:1767266-1767846	0	+	1767266	1767266	8553170	2	469,42,	0,538,
#Deleted in new
chr16	1767956	1769020	chr16:1767956-1769020	0	+	1767956	1767956	8553170	3	422,150,318,	0,520,746,
#Deleted in new
chr16	1770285	1771730	chr16:1770285-1771730	3	-	1770648	1771534	0	5	481,113,102,131,242,	0,595,784,994,1203,
#Deleted in new
chr16	1770319	1771495	chr16:1770319-1771495	0	-	1770758	1771495	789624	5	447,113,102,142,7,	0,561,750,949,1169,
#Deleted in new
chr16	1770334	1771538	chr16:1770334-1771538	0	-	1770334	1770334	8553170	3	432,113,469,	0,546,735,
#Deleted in new
chr16	1770340	1771206	chr16:1770340-1771206	0	-	1770340	1770340	8553170	2	426,326,	0,540,
#Deleted in new
chr16	1770341	1771510	chr16:1770341-1771510	0	-	1771182	1771510	789624	5	425,113,122,131,22,	0,539,728,938,1147,
#Deleted in new
chr16	1770343	1771561	chr16:1770343-1771561	1	-	1770648	1771096	789624	4	423,113,102,282,	0,537,726,936,
#Deleted in new
chr16	1770376	1771557	chr16:1770376-1771557	0	-	1770376	1770376	8553170	4	390,113,341,69,	0,504,693,1112,
#Deleted in new
chr16	1770460	1771543	chr16:1770460-1771543	0	-	1770460	1770460	8553170	3	306,530,55,	0,420,1028,
#Deleted in new
chr16	1770480	1771513	chr16:1770480-1771513	0	-	1770480	1770480	8553170	2	286,625,	0,408,
#Deleted in new
chr16	1770541	1771513	chr16:1770541-1771513	0	-	1771148	1771513	789624	5	225,105,122,106,25,	0,347,528,763,947,
#Deleted in new
chr16	1770648	1771323	chr16:1770648-1771323	0	-	1770648	1770648	8553170	2	345,254,	0,421,
#Deleted in new
chr16	1771889	1773150	chr16:1771889-1773150	1	-	1772220	1773119	789624	3	645,43,352,	0,714,909,
#Deleted in new
chr16	1771889	1773155	chr16:1771889-1773155	3	-	1772220	1773119	0	3	624,43,357,	0,714,909,
#Deleted in new
chr16	1771895	1772698	chr16:1771895-1772698	0	-	1771895	1771895	8553170	2	618,95,	0,708,
#Deleted in new
chr16	1773206	1776311	chr16:1773206-1776311	3	+	1773227	1776238	789624	8	268,137,93,92,94,116,190,244,	0,498,1053,1834,2108,2362,2590,2861,
#Deleted in new
chr16	1773325	1780627	chr16:1773325-1780627	0	+	1773325	1773325	8553170	7	149,137,93,368,116,190,4560,	0,379,934,1715,2243,2471,2742,
#Deleted in new
chr16	1774944	1775878	chr16:1774944-1775878	0	+	1774944	1774944	8553170	4	188,94,116,82,	0,370,624,852,
#Deleted in new
chr16	1775208	1775914	chr16:1775208-1775914	0	+	1775208	1775208	8553170	3	200,116,118,	0,360,588,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	1775314	1781708	chr16:1775314-1781708	0	+	1775314	1776238	789624	6	94,116,190,272,660,3254,	0,254,482,753,1431,3140,
#Deleted in new
chr16	1775811	1776962	chr16:1775811-1776962	0	+	1775811	1776238	789624	3	175,272,102,	0,256,1049,
#Partially deleted in new
chr16	1776711	1782820	chr16:1776711-1782820	3	-	1777096	1781483	789624	7	732,126,103,188,178,138,319,	0,1035,1234,1422,1723,4646,5790,
#Partially deleted in new
chr16	1776713	1782505	chr16:1776713-1782505	0	-	1776713	1776713	8553170	6	730,126,103,479,138,740,	0,1033,1232,1420,4644,5052,
#Partially deleted in new
chr16	1776717	1782557	chr16:1776717-1782557	0	-	1776717	1776717	8553170	6	726,126,103,479,138,56,	0,1029,1228,1416,4640,5784,
#Partially deleted in new
chr16	1776717	1782552	chr16:1776717-1782552	0	-	1776717	1776717	8553170	4	726,866,138,51,	0,1029,4640,5784,
#Partially deleted in new
chr16	1776721	1782594	chr16:1776721-1782594	0	-	1776721	1776721	8553170	5	722,126,667,138,93,	0,1025,1224,4636,5780,
#Partially deleted in new
chr16	1776748	1781516	chr16:1776748-1781516	1	-	1777096	1781483	789624	6	695,126,103,188,178,159,	0,998,1197,1385,1686,4609,
#Partially deleted in new
chr16	1776794	1781509	chr16:1776794-1781509	0	-	1776794	1776794	8553170	5	649,126,103,479,152,	0,952,1151,1339,4563,
#Partially deleted in new
chr16	1777856	1781905	chr16:1777856-1781905	0	-	1777856	1777856	8553170	5	16,103,479,138,140,	0,89,277,3501,3909,
#Partially deleted in new
chr16	1778036	1793700	chr16:1778036-1793700	0	-	1778036	1781483	789624	5	12,188,178,138,64,	0,97,398,3321,15600,
#Partially deleted in new
chr16	1778063	1782547	chr16:1778063-1782547	0	-	1778063	1778063	8553170	3	549,303,46,	0,3129,4438,
#Partially deleted in new
chr16	1778169	1782754	chr16:1778169-1782754	0	-	1778169	1778169	8553170	3	443,138,133,	0,3188,4452,
#Deleted in new
chr16	1781041	1782567	chr16:1781041-1782567	0	-	1781041	1781041	8553170	2	454,66,	0,1460,
#Partially deleted in new
chr16	1782900	1789191	chr16:1782900-1789191	3	+	1783020	1788714	789624	7	136,119,199,155,111,70,623,	0,3636,3856,4776,5040,5237,5668,
#Partially deleted in new
chr16	1782931	1787024	chr16:1782931-1787024	0	+	1782931	1782931	8553170	3	105,119,287,	0,3605,3806,
#Partially deleted in new
chr16	1782931	1789183	chr16:1782931-1789183	0	+	1782931	1782931	8553170	5	105,1295,111,70,615,	0,3605,5009,5206,5637,
#Partially deleted in new
chr16	1782931	1789181	chr16:1782931-1789181	0	+	1783020	1787682	789624	6	105,119,155,111,70,613,	0,3605,4745,5009,5206,5637,
#Partially deleted in new
chr16	1782955	1787264	chr16:1782955-1787264	0	+	1782955	1782955	8553170	3	81,119,508,	0,3581,3801,
#Partially deleted in new
chr16	1782967	1787740	chr16:1782967-1787740	0	+	1783020	1787740	789624	4	69,119,218,64,	0,3569,3770,4709,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	1782989	1788726	chr16:1782989-1788726	1	+	1786801	1788714	789624	8	47,190,119,199,155,111,70,158,	0,887,3547,3767,4687,4951,5148,5579,
#Partially deleted in new
chr16	1782994	1788000	chr16:1782994-1788000	0	+	1783020	1788000	789624	6	42,264,119,199,155,60,	0,2644,3542,3762,4682,4946,
#Partially deleted in new
chr16	1782995	1788767	chr16:1782995-1788767	0	+	1782995	1782995	8553170	6	41,419,155,111,70,199,	0,3541,4681,4945,5142,5573,
#Partially deleted in new
chr16	1782998	1788680	chr16:1782998-1788680	0	+	1783020	1787682	789624	6	38,119,155,111,47,112,	0,3538,4678,4942,5162,5570,
#Partially deleted in new
chr16	1783006	1788613	chr16:1783006-1788613	1	+	1783020	1788207	789624	6	30,119,199,155,267,45,	0,3530,3750,4670,4934,5562,
#Partially deleted in new
chr16	1783022	1787777	chr16:1783022-1787777	0	+	1783022	1783197	789624	4	484,119,199,101,	0,3514,3734,4654,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	1783852	1788150	chr16:1783852-1788150	0	+	1786801	1788150	789624	6	214,119,199,155,111,13,	0,2684,2904,3824,4088,4285,
#Partially deleted in new
chr16	1784009	1788969	chr16:1784009-1788969	1	+	1787765	1788714	789624	6	57,119,155,111,70,401,	0,2527,3667,3931,4128,4559,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	1784459	1786130	chr16:1784459-1786130	0	+	1784459	1784459	8553170	2	152,1328,	0,343,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	1784710	1786945	chr16:1784710-1786945	0	+	1784710	1784710	8553170	1	2235,	0,
#Deleted in new
chr16	1790412	1793763	chr16:1790412-1793763	3	-	1790599	1793652	789624	2	1989,127,	0,3224,
#Deleted in new
chr16	1790475	1793732	chr16:1790475-1793732	1	-	1790599	1793652	789624	2	2040,96,	0,3161,
#Deleted in new
chr16	1791804	1794971	chr16:1791804-1794971	1	-	1792053	1794886	789624	2	597,133,	0,3034,
#Partially deleted in new
chr16	1795619	1822904	chr16:1795619-1822904	0	-	1809282	1822904	789624	9	101,145,80,102,104,109,118,65,40,	0,13618,14134,21273,21548,23495,24277,26680,27245,
#Partially deleted in new
chr16	1807576	1816907	chr16:1807576-1816907	0	-	1809282	1816907	789624	4	372,145,80,15,	0,1661,2177,9316,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	1807632	1827194	chr16:1807632-1827194	3	-	1809282	1826787	0	9	1750,80,102,104,109,118,65,173,483,	0,2121,9260,9535,11482,12264,14667,15232,19079,
#Partially deleted in new
chr16	1808871	1826834	chr16:1808871-1826834	1	-	1809760	1826787	0	8	511,80,102,104,118,65,173,123,	0,882,8021,8296,11025,13428,13993,17840,
#Partially deleted in new
chr16	1809102	1826841	chr16:1809102-1826841	1	-	1809282	1822969	0	10	280,80,102,104,109,118,65,173,96,130,	0,651,7790,8065,10012,10794,13197,13762,17404,17609,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	1809104	1812419	chr16:1809104-1812419	0	-	1809104	1809104	8553170	3	278,1134,61,	0,649,3254,
#Partially deleted in new
chr16	1809123	1827157	chr16:1809123-1827157	1	-	1809352	1822969	789624	9	323,80,102,104,109,118,65,173,217,	0,630,7769,8044,9991,10773,13176,13741,17817,
#Partially deleted in new
chr16	1817188	1826778	chr16:1817188-1826778	0	-	1817188	1822969	789624	6	83,109,118,65,173,272,	0,1926,2708,5111,5676,9318,
#Partially deleted in new
chr16	1818514	1826802	chr16:1818514-1826802	0	-	1818514	1818514	8553170	5	709,118,65,173,91,	0,1382,3785,4350,8197,
#Partially deleted in new
chr16	1819834	1826560	chr16:1819834-1826560	0	-	1819834	1819834	8553170	4	180,65,173,54,	0,2465,3030,6672,
#Partially deleted in new
chr16	1819835	1826807	chr16:1819835-1826807	0	-	1819835	1819835	8553170	4	179,65,173,96,	0,2464,3029,6876,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	1821511	1826832	chr16:1821511-1826832	0	-	1821511	1821511	8553170	3	853,173,121,	0,1353,5200,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	1826940	1828914	chr16:1826940-1828914	3	+	1827229	1827904	0	1	1974,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	1826966	1840207	chr16:1826966-1840207	1	+	1827229	1838126	0	3	899,119,946,	0,11049,12295,
#Partially deleted in new
chr16	1826966	1840207	chr16:1826966-1840207	1	+	1827229	1839306	0	2	899,946,	0,12295,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	1827219	1838126	chr16:1827219-1838126	1	+	1827229	1838126	0	2	646,111,	0,10796,
#Partially deleted in new
chr16	1833986	1884294	chr16:1833986-1884294	1	-	1834255	1854107	789624	13	380,87,184,154,102,96,53,101,196,73,132,101,198,	0,3797,5268,7833,10875,19052,19232,20113,23748,26416,27998,49209,50110,
#Partially deleted in new
chr16	1833987	1868185	chr16:1833987-1868185	1	-	1834255	1868175	789624	13	379,87,184,154,102,96,53,101,196,73,132,58,79,	0,3796,5267,7832,10874,19051,19231,20112,23747,26415,27997,31790,34119,
#Partially deleted in new
chr16	1833987	1872178	chr16:1833987-1872178	3	-	1834255	1868175	789624	13	379,184,154,102,96,53,101,196,73,132,58,78,186,	0,5267,7832,10874,19051,19231,20112,23747,26415,27997,31790,34119,38005,
#Partially deleted in new
chr16	1837683	1841907	chr16:1837683-1841907	0	-	1837683	1837683	8553170	3	187,184,88,	0,1571,4136,
#Partially deleted in new
chr16	1844959	1872144	chr16:1844959-1872144	0	-	1844959	1854107	789624	8	4,96,53,101,196,73,132,152,	0,8079,8259,9140,12775,15443,17025,27033,
#Partially deleted in new
chr16	1857711	1872095	chr16:1857711-1872095	0	-	1862053	1868175	789624	5	219,73,132,78,103,	0,2691,4273,10395,14281,
#Partially deleted in new
chr16	1878284	1884231	chr16:1878284-1884231	3	-	1878284	1878284	789624	3	426,101,135,	0,4911,5812,
#Partially deleted in new
chr16	1878558	1884233	chr16:1878558-1884233	1	-	1878558	1878558	8553170	4	152,49,101,137,	0,1102,4637,5538,
#Partially deleted in new
chr16	1889113	1890434	chr16:1889113-1890434	3	+	1889113	1889113	789624	2	182,302,	0,1019,
#Partially deleted in new
chr16	1911462	1918440	chr16:1911462-1918440	3	-	1911589	1918323	789624	2	743,530,	0,6448,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	1938209	1943326	chr16:1938209-1943326	3	-	1939111	1943156	0	4	934,115,149,225,	0,2568,3047,4892,
#Partially deleted in new
chr16	1938233	1943293	chr16:1938233-1943293	1	-	1939111	1943156	789624	5	910,34,78,149,192,	0,2544,2581,3023,4868,
#Partially deleted in new
chr16	1938941	1943123	chr16:1938941-1943123	0	-	1941258	1943123	789624	3	202,149,22,	0,2315,4160,
#Partially deleted in new
chr16	1939018	1943195	chr16:1939018-1943195	1	-	1940779	1943156	789624	3	125,628,94,	0,1759,4083,
#Partially deleted in new
chr16	1939094	1943199	chr16:1939094-1943199	1	-	1940779	1943156	789624	5	49,115,139,149,98,	0,1683,1934,2162,4007,
#Deleted in new
chr16	1940977	1941939	chr16:1940977-1941939	0	-	1940977	1940977	8553170	3	190,149,370,	0,279,592,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	1943973	1954726	chr16:1943973-1954726	3	-	1944836	1954631	789624	10	920,120,96,102,161,187,136,169,193,98,	0,1525,1861,2651,2964,3220,6870,8900,9982,10655,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	1952953	1957606	chr16:1952953-1957606	0	-	1952953	1953995	789624	3	89,193,293,	0,1002,4360,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	1954656	1957597	chr16:1954656-1957597	0	-	1954656	1954656	8553170	2	353,204,	0,2737,
#Partially deleted in new
chr16	1959507	1961975	chr16:1959507-1961975	3	+	1959624	1961906	0	4	247,139,140,179,	0,1645,1989,2289,
#Partially deleted in new
chr16	1959542	1961975	chr16:1959542-1961975	1	+	1959624	1961734	0	3	212,139,479,	0,1610,1954,
#Partially deleted in new
chr16	1959543	1961899	chr16:1959543-1961899	0	+	1959543	1959543	8553170	2	211,747,	0,1609,
#Partially deleted in new
chr16	1959551	1961975	chr16:1959551-1961975	1	+	1959624	1961906	789624	4	203,106,140,179,	0,1601,1945,2245,
#Partially deleted in new
chr16	1959557	1961840	chr16:1959557-1961840	0	+	1959624	1961840	789624	4	197,139,115,44,	0,1595,1939,2239,
#Partially deleted in new
chr16	1962051	1964860	chr16:1962051-1964860	3	-	1962097	1964625	0	7	219,160,174,108,90,180,54,	0,445,684,1097,2224,2397,2755,
#Partially deleted in new
chr16	1962059	1964803	chr16:1962059-1964803	1	-	1962097	1964625	789624	5	211,160,108,90,355,	0,437,1089,2216,2389,
#Deleted in new
chr16	1962060	1963256	chr16:1962060-1963256	0	-	1962470	1963256	789624	3	596,174,108,	0,675,1088,
#Partially deleted in new
chr16	1962060	1964630	chr16:1962060-1964630	0	-	1962060	1962060	8553170	5	210,201,347,90,182,	0,436,849,2215,2388,
#Partially deleted in new
chr16	1962060	1964631	chr16:1962060-1964631	0	-	1962060	1962060	8553170	4	210,760,90,183,	0,436,2215,2388,
#Partially deleted in new
chr16	1962060	1964631	chr16:1962060-1964631	1	-	1962225	1964625	789624	5	210,174,108,90,183,	0,675,1088,2215,2388,
#Partially deleted in new
chr16	1962060	1964631	chr16:1962060-1964631	0	-	1962060	1962060	8553170	6	210,160,174,108,713,183,	0,436,675,1088,1592,2388,
#Partially deleted in new
chr16	1962060	1964367	chr16:1962060-1964367	0	-	1963740	1964367	789624	6	210,160,174,108,187,92,	0,436,675,1088,1592,2215,
#Partially deleted in new
chr16	1962060	1964813	chr16:1962060-1964813	0	-	1962060	1962060	8553170	5	210,413,108,90,365,	0,436,1088,2215,2388,
#Partially deleted in new
chr16	1962060	1964356	chr16:1962060-1964356	0	-	1962097	1964356	789624	4	210,160,174,81,	0,436,675,2215,
#Partially deleted in new
chr16	1962060	1964581	chr16:1962060-1964581	0	-	1962060	1962060	8553170	5	210,160,521,90,133,	0,436,675,2215,2388,
#Partially deleted in new
chr16	1962078	1964812	chr16:1962078-1964812	1	-	1962254	1964625	789624	5	187,160,174,108,364,	0,418,657,1070,2370,
#Deleted in new
chr16	1962333	1962466	chr16:1962333-1962466	3	-	1962333	1962333	789624	1	133,	0,
#Partially deleted in new
chr16	1962373	1964365	chr16:1962373-1964365	0	-	1962373	1962373	8553170	3	536,108,90,	0,775,1902,
#Partially deleted in new
chr16	1962551	1964806	chr16:1962551-1964806	0	-	1962551	1964625	789624	6	105,174,108,90,180,62,	0,184,597,1724,1897,2193,
#Partially deleted in new
chr16	1962642	1964538	chr16:1962642-1964538	0	-	1962642	1962642	8553170	3	267,108,263,	0,506,1633,
#Partially deleted in new
chr16	1962949	1964805	chr16:1962949-1964805	0	-	1962949	1962949	8553170	2	307,530,	0,1326,
#Deleted in new
chr16	1962972	1963106	chr16:1962972-1963106	3	-	1962972	1962972	789624	1	134,	0,
#Partially deleted in new
chr16	1963211	1964841	chr16:1963211-1964841	0	-	1963211	1964362	789624	3	45,90,35,	0,1064,1595,
#Deleted in new
chr16	1963744	1964095	chr16:1963744-1964095	7	-	1963744	1963744	16724991	1	351,	0,
#Deleted in new
chr16	1964958	1965509	chr16:1964958-1965509	3	+	1964958	1964958	5263520	2	171,104,	0,447,
#Deleted in new
chr16	1965033	1965504	chr16:1965033-1965504	1	+	1965033	1965033	8553170	1	471,	0,
#Deleted in new
chr16	1965183	1965310	chr16:1965183-1965310	3	+	1965183	1965183	789624	1	127,	0,
#Deleted in new
chr16	1966822	1968948	chr16:1966822-1968948	1	+	1966881	1967996	789624	4	62,146,130,515,	0,451,1050,1611,
#Deleted in new
chr16	1966873	1968975	chr16:1966873-1968975	3	+	1966881	1968925	789624	4	11,146,97,542,	0,400,851,1560,
#Deleted in new
chr16	1967272	1968975	chr16:1967272-1968975	1	+	1967273	1968925	789624	3	147,97,542,	0,452,1161,
#Deleted in new
chr16	1971654	1971896	chr16:1971654-1971896	3	-	1971654	1971654	8553170	1	242,	0,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr16	1972036	1982933	chr16:1972036-1982933	3	+	1972164	1978685	789624	22	169,52,96,48,142,85,171,76,94,182,142,59,104,148,231,71,157,59,104,72,159,4382,	0,2019,2160,2339,2501,2726,2891,3150,3308,3492,3771,4019,4174,4777,5017,5319,5477,5705,5921,6112,6276,6515,
#Partially deleted in new
chr16	1972070	1974791	chr16:1972070-1974791	0	+	1972164	1974404	789624	6	135,52,112,48,142,29,	0,1985,2110,2305,2467,2692,
#Partially deleted in new
chr16	1972085	1978684	chr16:1972085-1978684	0	+	1972085	1972085	8553170	21	120,237,48,142,85,171,76,94,182,142,59,104,148,231,71,157,59,104,72,159,133,	0,1970,2290,2452,2677,2842,3101,3259,3443,3722,3970,4125,4728,4968,5270,5428,5656,5872,6063,6227,6466,
#Partially deleted in new
chr16	1972108	1978683	chr16:1972108-1978683	1	+	1974642	1977748	789624	26	97,52,96,48,142,85,171,76,94,182,142,59,104,148,123,107,22,3,44,94,59,59,104,72,157,132,	0,1947,2088,2267,2429,2654,2819,3078,3236,3420,3699,3947,4102,4705,4945,5069,5247,5270,5274,5405,5503,5633,5849,6040,6206,6443,
#Deleted in new
chr16	1974578	1978684	chr16:1974578-1978684	0	+	1974578	1978684	789624	18	101,85,171,76,94,182,142,59,47,148,231,71,157,59,104,72,159,133,	0,184,349,608,766,950,1229,1477,1632,2235,2475,2777,2935,3163,3379,3570,3734,3973,
#Deleted in new
chr16	1975996	1977768	chr16:1975996-1977768	0	+	1975996	1975996	8553170	7	118,104,148,231,71,157,27,	0,214,817,1057,1359,1517,1745,
#Deleted in new
chr16	1976068	1977672	chr16:1976068-1977672	0	+	1976068	1976068	8553170	4	46,104,148,619,	0,142,745,985,
#Deleted in new
chr16	1977025	1978717	chr16:1977025-1978717	0	+	1977025	1977025	8553170	8	259,71,157,59,104,72,159,166,	0,330,488,716,932,1123,1287,1526,
#Deleted in new
chr16	1978916	1981549	chr16:1978916-1981549	1	-	1979051	1981179	0	8	433,118,114,185,178,73,81,436,	0,508,873,1080,1450,1739,2022,2197,
#Deleted in new
chr16	1978916	1981467	chr16:1978916-1981467	3	-	1979051	1981179	0	8	433,118,114,185,178,76,81,354,	0,508,873,1080,1450,1739,2022,2197,
#Deleted in new
chr16	1978916	1979644	chr16:1978916-1979644	0	-	1978916	1978916	8553170	2	433,220,	0,508,
#Deleted in new
chr16	1979039	1981183	chr16:1979039-1981183	1	-	1979051	1981179	0	8	310,118,114,185,178,91,81,70,	0,385,750,957,1327,1601,1899,2074,
#Deleted in new
chr16	1979039	1981183	chr16:1979039-1981183	1	-	1979051	1981179	0	8	310,118,114,185,178,88,81,70,	0,385,750,957,1327,1601,1899,2074,
#Deleted in new
chr16	1980059	1981444	chr16:1980059-1981444	0	-	1980059	1980059	8553170	3	122,653,331,	0,307,1054,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	1980539	1984192	chr16:1980539-1984192	0	-	1980539	1981179	789624	6	5,76,81,302,92,26,	0,116,399,574,2120,3627,
#Deleted in new
chr16	1984206	1986112	chr16:1984206-1986112	1	+	1984218	1985937	789624	2	270,247,	0,1659,
#Deleted in new
chr16	1984212	1987749	chr16:1984212-1987749	3	+	1984218	1986028	0	3	264,197,1884,	0,534,1653,
#Deleted in new
chr16	1984257	1985009	chr16:1984257-1985009	0	+	1984257	1984947	789624	2	219,263,	0,489,
#Deleted in new
chr16	1984331	1986618	chr16:1984331-1986618	0	+	1984331	1984331	8553170	2	612,753,	0,1534,
#Deleted in new
chr16	1984710	1986115	chr16:1984710-1986115	1	+	1984713	1986028	789624	2	233,250,	0,1155,
#Deleted in new
chr16	1984876	1986853	chr16:1984876-1986853	3	-	1984876	1984876	8553170	2	107,507,	0,1470,
#Partially deleted in new
chr16	1986265	1990357	chr16:1986265-1990357	0	-	1986265	1986265	8553170	2	506,39,	0,4053,
#Deleted in new
chr16	1989659	1993169	chr16:1989659-1993169	0	+	1989800	1993169	789624	4	172,238,143,307,	0,2314,2976,3203,
#Deleted in new
chr16	1989944	1994275	chr16:1989944-1994275	3	+	1990102	1993072	789624	4	257,238,143,1413,	0,2029,2691,2918,
#Deleted in new
chr16	1989998	1994267	chr16:1989998-1994267	1	+	1990102	1993596	789624	3	203,183,827,	0,1975,3442,
#Deleted in new
chr16	1990156	1992711	chr16:1990156-1992711	0	+	1990156	1992711	789624	4	45,174,238,76,	0,342,1817,2479,
#Deleted in new
chr16	1991123	1993374	chr16:1991123-1993374	1	+	1992139	1992878	789624	3	1088,143,512,	0,1512,1739,
#Deleted in new
chr16	1992462	1993298	chr16:1992462-1993298	0	+	1992462	1992462	8553170	2	316,436,	0,400,
#Partially deleted in new
chr16	1997653	2009764	chr16:1997653-2009764	0	-	1997653	1997653	8553170	11	932,151,157,761,73,188,109,527,130,113,241,	0,1048,1311,1842,2755,3350,3938,4552,5337,5962,11870,
#Partially deleted in new
chr16	1997653	2009823	chr16:1997653-2009823	3	-	1998231	2009580	789624	12	932,151,157,761,91,188,118,218,212,130,113,300,	0,1048,1311,1842,2737,3350,3929,4552,4867,5337,5962,11870,
#Deleted in new
chr16	1997653	1998374	chr16:1997653-1998374	3	+	1997653	1997653	8553170	2	279,225,	0,496,
#Partially deleted in new
chr16	1997654	2009795	chr16:1997654-2009795	0	-	1997654	1997654	8553170	7	1467,986,188,118,218,1208,272,	0,1841,3349,3928,4551,4866,11869,
#Deleted in new
chr16	1998152	1999195	chr16:1998152-1999195	0	-	1998152	1998152	8553170	3	433,151,231,	0,549,812,
#Partially deleted in new
chr16	1998231	2009747	chr16:1998231-2009747	1	-	1998231	2009580	789624	12	354,151,157,761,91,188,118,218,212,130,113,224,	0,470,733,1264,2159,2772,3351,3974,4289,4759,5384,11292,
#Deleted in new
chr16	1998423	2000071	chr16:1998423-2000071	0	-	1998817	2000071	789624	3	162,151,576,	0,278,1072,
#Partially deleted in new
chr16	1999499	2009764	chr16:1999499-2009764	0	-	1999499	1999499	8553170	8	757,73,188,118,527,130,113,241,	0,909,1504,2083,2706,3491,4116,10024,
#Partially deleted in new
chr16	1999893	2001744	chr16:1999893-2001744	0	-	1999893	1999893	8553170	4	363,73,188,162,	0,515,1110,1689,
#Partially deleted in new
chr16	2000009	2002345	chr16:2000009-2002345	0	-	2001168	2002345	789624	5	247,91,188,109,140,	0,381,994,1582,2196,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	2009925	2020592	chr16:2009925-2020592	0	+	2009937	2020592	789624	3	177,161,60,	0,10226,10607,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	2013180	2013476	chr16:2013180-2013476	3	+	2013180	2013180	8553170	1	296,	0,
#Deleted in new
chr16	2019544	2020755	chr16:2019544-2020755	1	+	2019901	2020619	789624	2	768,223,	0,988,
#Deleted in new
chr16	2019901	2020619	chr16:2019901-2020619	3	+	2019901	2020619	789624	2	411,87,	0,631,
#Partially deleted in new
chr16	2025355	2036389	chr16:2025355-2036389	0	+	2025480	2036389	789624	3	311,201,66,	0,4226,10968,
#Partially deleted in new
chr16	2026867	2039026	chr16:2026867-2039026	3	+	2027005	2037984	0	7	351,201,180,154,44,63,1201,	0,2714,9456,9860,10087,10670,10958,
#Partially deleted in new
chr16	2026927	2038489	chr16:2026927-2038489	1	+	2027005	2037984	0	7	291,201,180,154,44,63,631,	0,2654,9396,9800,10027,10610,10931,
#Partially deleted in new
chr16	2029526	2038165	chr16:2029526-2038165	1	+	2029686	2037984	789624	6	256,180,154,44,63,340,	0,6797,7201,7428,8011,8299,
#Partially deleted in new
chr16	2029753	2038024	chr16:2029753-2038024	0	+	2029753	2037786	789624	6	29,180,154,44,63,268,	0,6570,6974,7201,7784,8003,
#Deleted in new
chr16	2032811	2036823	chr16:2032811-2036823	0	+	2032811	2032811	8553170	4	106,303,180,96,	0,2579,3512,3916,
#Deleted in new
chr16	2033263	2037980	chr16:2033263-2037980	0	+	2033351	2037980	789624	6	163,180,154,44,63,155,	0,3060,3464,3691,4274,4562,
#Deleted in new
chr16	2033270	2038421	chr16:2033270-2038421	1	+	2033351	2037984	0	6	162,180,154,44,63,596,	0,3053,3457,3684,4267,4555,
#Deleted in new
chr16	2035980	2038128	chr16:2035980-2038128	0	+	2035980	2035980	8553170	5	523,154,44,63,303,	0,747,974,1557,1845,
#Partially deleted in new
chr16	2039814	2047866	chr16:2039814-2047866	3	-	2039923	2047847	789624	6	233,106,160,171,239,158,	0,318,3752,4815,6313,7894,
#Deleted in new
chr16	2039819	2040468	chr16:2039819-2040468	0	-	2039819	2039819	8553170	2	228,336,	0,313,
#Partially deleted in new
chr16	2039819	2044826	chr16:2039819-2044826	0	-	2039819	2039819	8553170	4	228,106,160,197,	0,313,3747,4810,
#Partially deleted in new
chr16	2039819	2047786	chr16:2039819-2047786	0	-	2039923	2047786	789624	5	228,109,160,239,78,	0,313,3747,6308,7889,
#Partially deleted in new
chr16	2039820	2044079	chr16:2039820-2044079	0	-	2039820	2039820	8553170	4	227,106,160,30,	0,312,3746,4229,
#Partially deleted in new
chr16	2039820	2047794	chr16:2039820-2047794	0	-	2044672	2047794	789624	6	227,106,160,171,87,86,	0,312,3746,4809,6459,7888,
#Partially deleted in new
chr16	2039822	2043803	chr16:2039822-2043803	0	-	2039822	2039822	8553170	3	225,106,237,	0,310,3744,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	2039851	2047743	chr16:2039851-2047743	0	-	2042096	2047743	789624	7	196,106,145,160,171,239,35,	0,281,2150,3715,4778,6276,7857,
#Partially deleted in new
chr16	2043483	2046214	chr16:2043483-2046214	0	-	2043483	2043483	8553170	3	243,171,87,	0,1146,2644,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	2046936	2047847	chr16:2046936-2047847	0	-	2046936	2046936	8553170	1	911,	0,
#Partially deleted in new
chr16	2047464	2088720	chr16:2047464-2088720	3	+	2048615	2088610	789624	42	601,167,87,111,145,118,49,126,74,127,144,138,104,82,156,117,123,107,151,123,135,190,94,103,95,129,165,153,113,213,204,69,122,488,76,93,187,140,79,92,99,275,	0,1122,2935,5877,6831,7937,8731,9179,9640,11282,13205,14406,15032,15507,16807,18054,22991,24045,24319,24776,25384,26735,28334,28603,29026,30133,31567,31811,32092,32700,34130,34971,36230,36763,37486,37765,38728,39267,40398,40583,40762,40981,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	2047966	2065258	chr16:2047966-2065258	0	+	2047966	2047966	8553170	15	99,167,87,1099,118,49,126,74,127,144,87,138,104,82,987,	0,620,2433,5375,7435,8229,8677,9138,10780,12703,12986,13904,14530,15005,16305,
#Partially deleted in new
chr16	2047976	2089245	chr16:2047976-2089245	1	+	2048615	2088610	789624	40	89,167,87,111,145,118,49,126,74,127,144,138,104,82,156,117,123,107,151,123,135,190,94,103,95,162,153,113,213,204,122,488,76,87,187,140,79,92,99,800,	0,610,2423,5365,6319,7425,8219,8667,9128,10770,12693,13894,14520,14995,16295,17542,22479,23533,23807,24264,24872,26223,27822,28091,28514,31058,31299,31580,32188,33618,35718,36251,36974,37259,38216,38755,39886,40071,40250,40469,
#Partially deleted in new
chr16	2047976	2089487	chr16:2047976-2089487	1	+	2048615	2088610	789624	41	89,167,87,111,145,118,49,126,74,127,144,138,104,82,156,117,123,107,151,123,135,190,94,103,95,129,165,153,113,213,204,122,488,76,87,187,140,79,92,99,1042,	0,610,2423,5365,6319,7425,8219,8667,9128,10770,12693,13894,14520,14995,16295,17542,22479,23533,23807,24264,24872,26223,27822,28091,28514,29621,31055,31299,31580,32188,33618,35718,36251,36974,37259,38216,38755,39886,40071,40250,40469,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	2047977	2065258	chr16:2047977-2065258	0	+	2047977	2047977	8553170	14	88,167,87,111,145,118,49,126,74,127,1339,104,82,987,	0,609,2422,5364,6318,7424,8218,8666,9127,10769,12692,14519,14994,16294,
#Partially deleted in new
chr16	2047979	2088700	chr16:2047979-2088700	1	+	2050408	2088610	789624	39	86,87,111,145,118,49,126,74,127,144,138,104,82,156,117,123,107,151,123,135,190,94,103,95,165,153,113,213,204,122,488,76,93,187,140,79,92,99,255,	0,2420,5362,6316,7422,8216,8664,9125,10767,12690,13891,14517,14992,16292,17539,22476,23530,23804,24261,24869,26220,27819,28088,28511,31052,31296,31577,32185,33615,35715,36248,36971,37250,38213,38752,39883,40068,40247,40466,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr16	2047982	2071616	chr16:2047982-2071616	0	+	2048615	2068560	789624	19	83,167,87,111,145,118,49,126,74,127,144,138,104,82,156,117,219,123,107,	0,604,2417,5359,6313,7419,8213,8661,9122,10764,12687,13888,14514,14989,16289,17536,20575,22473,23527,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	2047984	2055799	chr16:2047984-2055799	0	+	2047984	2047984	8553170	4	81,167,87,2458,	0,602,2415,5357,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	2047984	2064935	chr16:2047984-2064935	0	+	2047984	2047984	8553170	13	81,167,87,1099,118,49,126,74,127,1339,104,82,664,	0,602,2415,5357,7417,8211,8659,9120,10762,12685,14512,14987,16287,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	2047984	2065219	chr16:2047984-2065219	0	+	2048615	2060988	789624	16	81,167,87,111,145,118,49,126,74,127,144,87,138,104,82,948,	0,602,2415,5357,6311,7417,8211,8659,9120,10762,12685,12968,13886,14512,14987,16287,
#Partially deleted in new
chr16	2047985	2088716	chr16:2047985-2088716	1	+	2048615	2088610	789624	41	80,167,87,111,145,118,49,126,74,127,144,138,104,82,156,117,123,107,151,123,135,190,94,103,95,162,153,113,213,204,69,122,488,76,93,187,140,79,92,99,271,	0,601,2414,5356,6310,7416,8210,8658,9119,10761,12684,13885,14511,14986,16286,17533,22470,23524,23798,24255,24863,26214,27813,28082,28505,31049,31290,31571,32179,33609,34450,35709,36242,36965,37244,38207,38746,39877,40062,40241,40460,
#Partially deleted in new
chr16	2047988	2088718	chr16:2047988-2088718	1	+	2048615	2088610	789624	40	77,167,87,111,145,118,49,126,74,127,144,138,104,82,156,117,123,107,151,123,135,190,94,103,95,162,153,113,213,204,122,488,76,93,187,140,79,92,99,273,	0,598,2411,5353,6307,7413,8207,8655,9116,10758,12681,13882,14508,14983,16283,17530,22467,23521,23795,24252,24860,26211,27810,28079,28502,31046,31287,31568,32176,33606,35706,36239,36962,37241,38204,38743,39874,40059,40238,40457,
#Partially deleted in new
chr16	2047994	2088723	chr16:2047994-2088723	1	+	2048615	2088610	789624	40	71,167,87,111,145,118,49,126,74,127,144,138,104,82,156,117,123,107,151,123,135,190,94,103,95,165,153,113,213,204,122,488,76,87,187,140,79,92,99,278,	0,592,2405,5347,6301,7407,8201,8649,9110,10752,12675,13876,14502,14977,16277,17524,22461,23515,23789,24246,24854,26205,27804,28073,28496,31037,31281,31562,32170,33600,35700,36233,36956,37241,38198,38737,39868,40053,40232,40451,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	2048007	2065174	chr16:2048007-2065174	0	+	2048007	2048007	8553170	15	58,167,87,111,145,118,49,126,74,127,144,138,104,82,903,	0,579,2392,5334,6288,7394,8188,8636,9097,10739,12662,13863,14489,14964,16264,
#Partially deleted in new
chr16	2048008	2088720	chr16:2048008-2088720	1	+	2048615	2088610	789624	42	57,167,87,111,145,118,49,126,74,127,144,138,104,82,156,117,123,107,151,123,135,190,94,103,95,129,165,153,113,213,204,69,122,488,76,87,187,140,79,92,99,275,	0,578,2391,5333,6287,7393,8187,8635,9096,10738,12661,13862,14488,14963,16263,17510,22447,23501,23775,24232,24840,26191,27790,28059,28482,29589,31023,31267,31548,32156,33586,34427,35686,36219,36942,37227,38184,38723,39854,40039,40218,40437,
#Partially deleted in new
chr16	2048011	2076092	chr16:2048011-2076092	0	+	2048615	2056094	789624	24	54,167,87,111,145,118,265,126,74,127,144,138,104,82,156,117,123,107,151,123,135,190,94,25,	0,575,2388,5330,6284,7390,7968,8632,9093,10735,12658,13859,14485,14960,16260,17507,22444,23498,23772,24229,24837,26188,27787,28056,
#Partially deleted in new
chr16	2048013	2088701	chr16:2048013-2088701	1	+	2048615	2088610	789624	39	52,167,87,145,118,49,126,74,127,144,138,104,82,156,117,123,107,151,123,135,190,94,103,95,165,153,113,213,204,122,488,76,93,187,140,79,92,99,256,	0,573,2386,6282,7388,8182,8630,9091,10733,12656,13857,14483,14958,16258,17505,22442,23496,23770,24227,24835,26186,27785,28054,28477,31018,31262,31543,32151,33581,35681,36214,36937,37216,38179,38718,39849,40034,40213,40432,
#Partially deleted in new
chr16	2048019	2088718	chr16:2048019-2088718	1	+	2048615	2088610	789624	41	46,167,87,111,145,118,49,126,74,127,144,138,104,82,156,117,123,107,151,123,135,190,94,103,95,129,165,153,113,213,204,122,488,76,93,187,140,79,92,99,273,	0,567,2380,5322,6276,7382,8176,8624,9085,10727,12650,13851,14477,14952,16252,17499,22436,23490,23764,24221,24829,26180,27779,28048,28471,29578,31012,31256,31537,32145,33575,35675,36208,36931,37210,38173,38712,39843,40028,40207,40426,
#Partially deleted in new
chr16	2048023	2053425	chr16:2048023-2053425	0	+	2048615	2053425	789624	4	42,167,87,39,	0,563,2376,5363,
#Partially deleted in new
chr16	2048032	2088703	chr16:2048032-2088703	0	+	2048615	2056696	789624	38	33,167,87,49,126,74,127,144,138,104,82,156,117,123,107,151,123,135,190,94,103,95,162,153,113,213,204,69,122,488,76,93,187,140,79,92,99,258,	0,554,2367,8163,8611,9072,10714,12637,13838,14464,14939,16239,17486,22423,23477,23751,24208,24816,26167,27766,28035,28458,31002,31243,31524,32132,33562,34403,35662,36195,36918,37197,38160,38699,39830,40015,40194,40413,
#Partially deleted in new
chr16	2048032	2088691	chr16:2048032-2088691	1	+	2048615	2088610	789624	39	33,167,87,111,145,118,49,126,74,127,144,138,104,82,156,117,123,107,151,123,135,190,94,103,95,162,153,113,213,204,122,488,76,93,187,140,79,278,246,	0,554,2367,5309,6263,7369,8163,8611,9072,10714,12637,13838,14464,14939,16239,17486,22423,23477,23751,24208,24816,26167,27766,28035,28458,31002,31243,31524,32132,33562,35662,36195,36918,37197,38160,38699,39830,40015,40413,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	2048037	2065103	chr16:2048037-2065103	0	+	2048037	2048037	8553170	15	28,167,87,111,145,118,49,114,74,127,144,138,104,82,832,	0,549,2362,5304,6258,7364,8158,8618,9067,10709,12632,13833,14459,14934,16234,
#Partially deleted in new
chr16	2048040	2088718	chr16:2048040-2088718	1	+	2048615	2088610	789624	40	25,167,87,111,145,118,49,126,74,127,144,138,104,82,156,117,123,107,151,123,135,190,94,103,95,165,153,113,213,204,122,488,76,93,187,140,79,92,99,273,	0,546,2359,5301,6255,7361,8155,8603,9064,10706,12629,13830,14456,14931,16231,17478,22415,23469,23743,24200,24808,26159,27758,28027,28450,30991,31235,31516,32124,33554,35654,36187,36910,37189,38152,38691,39822,40007,40186,40405,
#Partially deleted in new
chr16	2048040	2088718	chr16:2048040-2088718	1	+	2048615	2088610	789624	41	25,167,87,111,145,118,49,126,74,127,144,138,104,82,156,117,123,107,151,123,135,190,94,103,95,165,153,113,213,204,69,122,488,76,93,187,140,79,92,99,273,	0,546,2359,5301,6255,7361,8155,8603,9064,10706,12629,13830,14456,14931,16231,17478,22415,23469,23743,24200,24808,26159,27758,28027,28450,30991,31235,31516,32124,33554,34395,35654,36187,36910,37189,38152,38691,39822,40007,40186,40405,
#Partially deleted in new
chr16	2048042	2088671	chr16:2048042-2088671	1	+	2048615	2088610	789624	41	23,167,87,111,145,118,49,126,74,127,144,138,104,82,156,117,123,107,151,123,135,190,94,103,95,165,153,113,213,204,69,122,488,76,93,187,140,79,92,87,226,	0,544,2357,5299,6253,7359,8153,8601,9062,10704,12627,13828,14454,14929,16229,17476,22413,23467,23741,24198,24806,26157,27756,28025,28448,30989,31233,31514,32122,33552,34393,35652,36185,36908,37187,38150,38689,39820,40005,40196,40403,
#Partially deleted in new
chr16	2048201	2088715	chr16:2048201-2088715	1	+	2048269	2088610	789624	40	72,167,87,111,145,118,49,126,74,127,144,138,104,82,156,117,123,107,151,123,135,190,94,103,95,162,153,113,213,204,122,488,76,93,187,140,79,92,99,270,	0,385,2198,5140,6094,7200,7994,8442,8903,10545,12468,13669,14295,14770,16070,17317,22254,23308,23582,24039,24647,25998,27597,27866,28289,30833,31074,31355,31963,33393,35493,36026,36749,37028,37991,38530,39661,39846,40025,40244,
#Partially deleted in new
chr16	2048622	2088710	chr16:2048622-2088710	0	+	2048622	2088610	789624	40	131,87,111,145,118,49,126,74,127,144,138,104,82,156,117,123,107,151,123,135,190,94,103,95,129,162,153,113,213,204,122,488,76,93,187,140,79,92,99,265,	0,1777,4719,5673,6779,7573,8021,8482,10124,12047,13248,13874,14349,15649,16896,21833,22887,23161,23618,24226,25577,27176,27445,27868,28975,30412,30653,30934,31542,32972,35072,35605,36328,36607,37570,38109,39240,39425,39604,39823,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	2048735	2055892	chr16:2048735-2055892	0	+	2048735	2048735	8553170	4	18,87,1099,491,	0,1664,4606,6666,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	2048740	2065298	chr16:2048740-2065298	0	+	2048740	2048740	8553170	12	13,87,1099,101,49,126,74,127,1339,104,82,1027,	0,1659,4601,6678,7455,7903,8364,10006,11929,13756,14231,15531,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	2050436	2064941	chr16:2050436-2064941	0	+	2050436	2050436	8553170	12	50,1099,118,49,126,74,127,144,138,72,82,670,	0,2905,4965,5759,6207,6668,8310,10233,11434,12092,12535,13835,
#Partially deleted in new
chr16	2053401	2056733	chr16:2053401-2056733	0	+	2053401	2055483	789624	5	51,145,101,49,90,	0,894,2017,2794,3242,
#Partially deleted in new
chr16	2053432	2056230	chr16:2053432-2056230	0	+	2053432	2056230	789624	4	110,145,118,35,	0,863,1969,2763,
#Partially deleted in new
chr16	2053571	2060816	chr16:2053571-2060816	0	+	2053571	2053571	8553170	7	869,118,49,126,100,127,147,	0,1830,2624,3072,3507,5175,7098,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	2053918	2055688	chr16:2053918-2055688	0	+	2053918	2053918	8553170	2	522,270,	0,1500,
#Partially deleted in new
chr16	2056144	2063046	chr16:2056144-2063046	0	+	2056144	2056144	8553170	6	100,126,74,127,104,75,	0,499,960,2602,6352,6827,
#Partially deleted in new
chr16	2061305	2088692	chr16:2061305-2088692	0	+	2061305	2061305	8553170	30	132,138,104,82,156,117,123,107,151,123,135,190,94,103,95,165,153,113,213,204,122,488,76,93,187,140,79,92,99,247,	0,565,1191,1666,2966,4213,9150,10204,10478,10935,11543,12894,14493,14762,15185,17726,17970,18251,18859,20289,22389,22922,23645,23924,24887,25426,26557,26742,26921,27140,
#Partially deleted in new
chr16	2061759	2074920	chr16:2061759-2074920	0	+	2061759	2061759	8553170	12	249,104,82,156,117,123,107,151,123,135,190,198,	0,737,1212,2512,3759,8696,9750,10024,10481,11089,12440,12963,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	2061841	2065229	chr16:2061841-2065229	0	+	2061841	2061841	8553170	3	167,104,2258,	0,655,1130,
#Partially deleted in new
chr16	2062517	2071572	chr16:2062517-2071572	0	+	2062517	2064281	789624	5	83,156,117,123,63,	0,1754,3001,7938,8992,
#Partially deleted in new
chr16	2062582	2088654	chr16:2062582-2088654	0	+	2062582	2088610	789624	30	18,82,156,117,123,107,151,123,135,190,94,103,95,129,162,153,113,213,204,69,122,488,76,93,187,140,79,92,99,209,	0,389,1689,2936,7873,8927,9201,9658,10266,11617,13216,13485,13908,15015,16452,16693,16974,17582,19012,19853,21112,21645,22368,22647,23610,24149,25280,25465,25644,25863,
#Partially deleted in new
chr16	2062837	2065628	chr16:2062837-2065628	0	+	2062837	2062837	8553170	3	216,156,110,	0,1434,2681,
#Partially deleted in new
chr16	2064070	2065583	chr16:2064070-2065583	0	+	2064070	2064070	8553170	2	357,65,	0,1448,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	2065412	2071897	chr16:2065412-2071897	0	+	2065412	2065412	8553170	4	223,123,107,114,	0,5043,6097,6371,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	2066228	2071534	chr16:2066228-2071534	0	+	2066228	2066228	8553170	4	222,219,123,25,	0,2329,4227,5281,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	2070459	2075270	chr16:2070459-2075270	0	+	2070459	2070459	8553170	6	119,107,151,123,135,1071,	0,1050,1324,1781,2389,3740,
#Partially deleted in new
chr16	2071388	2088577	chr16:2071388-2088577	0	+	2071388	2071388	8553170	23	228,151,123,135,190,94,103,95,165,153,113,213,204,122,488,76,93,187,140,79,92,99,132,	0,395,852,1460,2811,4410,4679,5102,7643,7887,8168,8776,10206,12306,12839,13562,13841,14804,15343,16474,16659,16838,17057,
#Deleted in new
chr16	2071659	2074369	chr16:2071659-2074369	0	+	2071659	2071659	8553170	4	275,123,135,170,	0,581,1189,2540,
#Deleted in new
chr16	2071784	2074212	chr16:2071784-2074212	0	+	2071784	2072248	789624	4	150,163,135,13,	0,416,1064,2415,
#Deleted in new
chr16	2072594	2074652	chr16:2072594-2074652	0	+	2072594	2072594	8553170	2	389,453,	0,1605,
#Deleted in new
chr16	2076136	2076665	chr16:2076136-2076665	0	+	2076136	2076136	8553170	2	34,175,	0,354,
#Deleted in new
chr16	2076146	2079595	chr16:2076146-2079595	0	+	2076146	2076254	789624	5	111,95,165,153,39,	0,344,2885,3129,3410,
#Deleted in new
chr16	2076155	2079623	chr16:2076155-2079623	0	+	2076155	2076254	789624	5	102,95,162,153,67,	0,335,2879,3120,3401,
#Deleted in new
chr16	2077403	2079349	chr16:2077403-2079349	0	+	2077403	2077403	8553170	3	323,165,74,	0,1628,1872,
#Partially deleted in new
chr16	2078238	2088711	chr16:2078238-2088711	0	+	2078238	2078238	8553170	15	958,153,113,213,204,122,488,76,93,187,105,79,92,99,266,	0,1037,1318,1926,3356,5456,5989,6712,6991,7954,8528,9624,9809,9988,10207,
#Partially deleted in new
chr16	2078773	2088692	chr16:2078773-2088692	0	+	2078773	2078773	8553170	15	423,153,113,213,204,122,488,76,93,187,140,79,92,99,247,	0,502,783,1391,2821,4921,5454,6177,6456,7419,7958,9089,9274,9453,9672,
#Deleted in new
chr16	2078919	2079602	chr16:2078919-2079602	0	+	2078919	2078919	8553170	2	509,46,	0,637,
#Partially deleted in new
chr16	2078919	2082467	chr16:2078919-2082467	0	+	2078919	2078919	8553170	6	277,153,113,213,204,32,	0,356,637,1245,2675,3516,
#Partially deleted in new
chr16	2079657	2088644	chr16:2079657-2088644	0	+	2079657	2079657	8553170	13	12,213,910,122,488,76,93,187,140,79,92,99,199,	0,507,1937,4037,4570,5293,5572,6535,7074,8205,8390,8569,8788,
#Partially deleted in new
chr16	2080287	2088690	chr16:2080287-2088690	0	+	2080287	2080287	8553170	12	90,906,122,488,76,93,187,140,79,92,99,245,	0,1307,3407,3940,4663,4942,5905,6444,7575,7760,7939,8158,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	2080336	2088661	chr16:2080336-2088661	0	+	2080336	2080336	8553170	12	1462,69,122,488,76,93,187,140,79,92,99,216,	0,2099,3358,3891,4614,4893,5856,6395,7526,7711,7890,8109,
#Deleted in new
chr16	2081474	2084297	chr16:2081474-2084297	0	+	2081474	2081474	8553170	3	324,122,70,	0,2220,2753,
#Deleted in new
chr16	2081929	2088692	chr16:2081929-2088692	0	+	2081929	2081929	8553170	10	1887,488,76,93,187,140,79,92,99,247,	0,2298,3021,3300,4263,4802,5933,6118,6297,6516,
#Deleted in new
chr16	2082439	2088690	chr16:2082439-2088690	0	+	2082439	2086256	789624	11	119,122,475,76,93,187,140,79,92,99,245,	0,1255,1788,2511,2790,3753,4292,5423,5608,5787,6006,
#Deleted in new
chr16	2082468	2084520	chr16:2082468-2084520	0	+	2082468	2084520	789624	3	126,122,293,	0,1226,1759,
#Deleted in new
chr16	2083189	2086871	chr16:2083189-2086871	0	+	2083189	2083189	8553170	7	65,122,488,76,93,187,140,	0,505,1038,1761,2040,3003,3542,
#Deleted in new
chr16	2083797	2088040	chr16:2083797-2088040	0	+	2083797	2083797	8553170	7	19,488,76,93,187,140,178,	0,430,1153,1432,2395,2934,4065,
#Deleted in new
chr16	2085063	2089444	chr16:2085063-2089444	0	+	2085063	2085063	8553170	7	259,187,140,79,92,99,999,	0,1129,1668,2799,2984,3163,3382,
#Deleted in new
chr16	2085178	2088040	chr16:2085178-2088040	0	+	2085178	2085178	8553170	4	144,187,140,178,	0,1014,1553,2684,
#Deleted in new
chr16	2086369	2087199	chr16:2086369-2087199	0	+	2086369	2086369	8553170	2	10,468,	0,362,
#Partially deleted in new
chr16	2088709	2135898	chr16:2088709-2135898	3	-	2089726	2135689	0	46	1485,306,135,291,175,126,142,113,140,195,203,119,94,185,53,117,127,211,144,171,196,253,157,630,145,153,160,214,280,144,150,3620,134,176,132,756,248,127,116,221,184,672,170,72,72,424,	0,1575,1964,2174,2713,3071,3337,3770,4244,4834,5101,5382,8438,8609,9018,9158,10934,11151,11456,11686,13351,13671,14104,14556,15788,16612,17155,17381,17688,18095,19173,19542,23630,24078,24451,25460,26668,27282,27819,28123,28779,29081,29966,30404,30597,46765,
#Partially deleted in new
chr16	2088709	2135898	chr16:2088709-2135898	1	-	2089726	2135689	0	46	1485,306,135,291,175,126,142,113,140,195,203,119,94,185,50,117,127,211,144,171,196,253,157,630,145,153,160,214,280,144,150,3620,134,176,132,756,248,127,116,221,184,672,170,72,72,424,	0,1575,1964,2174,2713,3071,3337,3770,4244,4834,5101,5382,8438,8609,9018,9158,10934,11151,11456,11686,13351,13671,14104,14556,15788,16612,17155,17381,17688,18095,19173,19542,23630,24078,24451,25460,26668,27282,27819,28123,28779,29081,29966,30404,30597,46765,
#Deleted in new
chr16	2089526	2090839	chr16:2089526-2090839	0	-	2089526	2089526	8553170	3	668,306,166,	0,758,1147,
#Deleted in new
chr16	2090194	2090284	chr16:2090194-2090284	3	-	2090194	2090194	5263520	1	90,	0,
#Deleted in new
chr16	2090764	2092013	chr16:2090764-2092013	0	-	2090764	2090764	8553170	3	44,291,233,	0,119,1016,
#Deleted in new
chr16	2090882	2092170	chr16:2090882-2092170	0	-	2091841	2092170	789624	4	292,175,74,124,	0,540,898,1164,
#Partially deleted in new
chr16	2090984	2109853	chr16:2090984-2109853	0	-	2102954	2109853	789624	30	190,175,126,142,113,140,195,203,119,94,185,53,117,127,211,144,171,196,253,157,125,380,145,153,160,214,280,144,150,1602,	0,438,796,1062,1495,1969,2559,2826,3107,6163,6334,6743,6883,8659,8876,9181,9411,11076,11396,11829,12281,12531,13513,14337,14880,15106,15413,15820,16898,17267,
#Deleted in new
chr16	2091427	2092597	chr16:2091427-2092597	0	-	2091427	2091427	8553170	3	170,408,118,	0,353,1052,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	2091435	2095017	chr16:2091435-2095017	0	+	2091435	2091435	789624	3	179,124,297,	0,1453,3285,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	2091538	2095433	chr16:2091538-2095433	3	+	2091538	2091538	8553170	4	70,124,221,91,	0,1350,3182,3804,
#Deleted in new
chr16	2091822	2093884	chr16:2091822-2093884	0	-	2092586	2093884	789624	5	84,142,113,195,74,	0,224,657,1721,1988,
#Deleted in new
chr16	2092045	2092911	chr16:2092045-2092911	0	-	2092045	2092045	8553170	2	143,432,	0,434,
#Deleted in new
chr16	2092885	2094146	chr16:2092885-2094146	0	-	2092885	2092885	8553170	4	208,195,203,55,	0,658,925,1206,
#Deleted in new
chr16	2093354	2093873	chr16:2093354-2093873	0	-	2093354	2093354	8553170	2	384,63,	0,456,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	2094829	2097026	chr16:2094829-2097026	3	-	2094829	2094829	8553170	2	385,211,	0,1986,
#Partially deleted in new
chr16	2097727	2112963	chr16:2097727-2112963	0	-	2097727	2097727	8553170	17	257,127,211,144,171,196,253,157,464,145,153,160,214,280,144,134,176,	0,1916,2133,2438,2668,4333,4653,5086,5704,6770,7594,8137,8363,8670,9077,14612,15060,
#Partially deleted in new
chr16	2097727	2114124	chr16:2097727-2114124	0	-	2097727	2097727	8553170	19	257,127,211,144,171,196,253,157,791,145,153,160,214,280,144,134,176,132,348,	0,1916,2133,2438,2668,4333,4653,5086,5377,6770,7594,8137,8363,8670,9077,14612,15060,15433,16049,
#Partially deleted in new
chr16	2097727	2107759	chr16:2097727-2107759	0	-	2097727	2097727	8553170	14	257,127,211,144,171,196,253,157,630,145,703,214,280,955,	0,1916,2133,2438,2668,4333,4653,5086,5538,6770,7594,8363,8670,9077,
#Partially deleted in new
chr16	2097727	2103789	chr16:2097727-2103789	0	-	2097727	2097727	8553170	9	257,127,211,144,171,196,253,157,524,	0,1916,2133,2438,2668,4333,4653,5086,5538,
#Partially deleted in new
chr16	2097727	2105398	chr16:2097727-2105398	0	-	2097727	2105398	789624	12	53,117,127,211,144,171,196,253,157,171,145,77,	0,140,1916,2133,2438,2668,4333,4653,5086,5997,6770,7594,
#Partially deleted in new
chr16	2097727	2100300	chr16:2097727-2100300	0	-	2097727	2097727	8553170	3	257,211,135,	0,2133,2438,
#Partially deleted in new
chr16	2097751	2100453	chr16:2097751-2100453	0	-	2097751	2097751	8553170	5	29,117,211,144,58,	0,116,2109,2414,2644,
#Partially deleted in new
chr16	2097851	2108016	chr16:2097851-2108016	0	-	2097851	2097851	8553170	15	133,127,211,144,171,196,253,157,630,145,386,160,214,280,1212,	0,1792,2009,2314,2544,4209,4529,4962,5414,6646,7470,8013,8239,8546,8953,
#Partially deleted in new
chr16	2097858	2099893	chr16:2097858-2099893	0	-	2097858	2097858	8553170	3	333,127,33,	0,1785,2002,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	2098832	2103687	chr16:2098832-2103687	0	-	2098832	2098832	8553170	8	938,211,144,171,196,253,157,435,	0,1028,1333,1563,3228,3548,3981,4420,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	2099077	2103793	chr16:2099077-2103793	0	-	2099077	2099077	8553170	8	693,211,144,171,196,253,157,528,	0,783,1088,1318,2983,3303,3736,4188,
#Deleted in new
chr16	2099461	2100407	chr16:2099461-2100407	0	-	2099461	2099461	8553170	5	102,127,211,144,12,	0,182,399,704,934,
#Deleted in new
chr16	2099931	2100686	chr16:2099931-2100686	0	-	2099931	2099931	8553170	2	140,521,	0,234,
#Deleted in new
chr16	2100022	2100765	chr16:2100022-2100765	0	-	2100022	2100022	8553170	3	49,144,370,	0,143,373,
#Deleted in new
chr16	2101950	2103177	chr16:2101950-2103177	0	-	2101950	2101950	8553170	3	306,253,364,	0,430,863,
#Deleted in new
chr16	2102379	2103531	chr16:2102379-2103531	0	-	2102379	2102379	8553170	3	254,157,100,	0,434,1052,
#Deleted in new
chr16	2103516	2106408	chr16:2103516-2106408	0	-	2103516	2103516	8553170	7	110,171,145,153,160,214,11,	0,208,981,1805,2348,2574,2881,
#Deleted in new
chr16	2103788	2114481	chr16:2103788-2114481	0	-	2103788	2103788	8553170	12	107,145,153,160,214,280,144,134,176,19,132,312,	0,709,1533,2076,2302,2609,3016,8551,8999,9252,9372,10381,
#Deleted in new
chr16	2105356	2106104	chr16:2105356-2106104	0	-	2105356	2105356	8553170	3	306,160,14,	0,508,734,
#Deleted in new
chr16	2105377	2106407	chr16:2105377-2106407	0	-	2105377	2105377	8553170	3	97,160,317,	0,487,713,
#Deleted in new
chr16	2106275	2107756	chr16:2106275-2107756	0	-	2106275	2106275	8553170	4	29,280,144,124,	0,122,529,1357,
#Deleted in new
chr16	2106502	2117959	chr16:2106502-2117959	0	-	2116578	2117959	789624	12	175,144,134,176,132,756,248,127,116,184,184,169,	0,302,5837,6285,6658,7667,8875,9489,10026,10330,10986,11288,
#Deleted in new
chr16	2106520	2113074	chr16:2106520-2113074	0	-	2106520	2106520	8553170	4	157,144,134,287,	0,284,5819,6267,
#Deleted in new
chr16	2106589	2112830	chr16:2106589-2112830	0	-	2106589	2112830	789624	5	88,144,56,134,43,	0,215,5226,5750,6198,
#Deleted in new
chr16	2106668	2106753	chr16:2106668-2106753	3	-	2106668	2106668	5263520	1	85,	0,
#Deleted in new
chr16	2106940	2118078	chr16:2106940-2118078	0	-	2106940	2118078	789624	5	8,150,107,184,288,	0,942,1311,10548,10850,
#Deleted in new
chr16	2107584	2108548	chr16:2107584-2108548	0	-	2107584	2107584	8553170	3	220,150,297,	0,298,667,
#Deleted in new
chr16	2109290	2113280	chr16:2109290-2113280	0	-	2109290	2109290	8553170	4	60,134,176,120,	0,3049,3497,3870,
#Deleted in new
chr16	2111457	2112898	chr16:2111457-2112898	0	-	2111457	2111457	8553170	3	414,134,111,	0,882,1330,
#Deleted in new
chr16	2112334	2113342	chr16:2112334-2113342	3	+	2112334	2112334	8553170	2	160,296,	0,712,
#Deleted in new
chr16	2116591	2118124	chr16:2116591-2118124	0	-	2116591	2116591	8553170	3	53,184,334,	0,897,1199,
#Deleted in new
chr16	2119206	2120248	chr16:2119206-2120248	3	+	2119206	2119206	8553170	2	179,448,	0,594,
#Deleted in new
chr16	2131850	2131950	chr16:2131850-2131950	3	+	2131850	2131850	8553170	1	100,	0,
#Deleted in new
chr16	2133118	2133204	chr16:2133118-2133204	3	+	2133118	2133118	5263520	1	86,	0,
#Deleted in new
chr16	2135976	2136129	chr16:2135976-2136129	3	-	2135976	2135976	5263520	1	153,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	2140802	2153070	chr16:2140802-2153070	0	+	2149943	2151216	789624	7	147,111,186,42,67,53,251,	0,9138,10327,10766,10892,11053,12017,
#Partially deleted in new
chr16	2148143	2153421	chr16:2148143-2153421	1	+	2149943	2153421	0	10	181,187,111,42,67,53,66,57,77,103,	0,648,1797,3425,3551,3712,4676,4845,5002,5175,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	2148272	2154139	chr16:2148272-2154139	0	+	2148272	2148272	8553170	9	52,187,111,186,42,67,53,403,821,	0,519,1668,2857,3296,3422,3583,4547,5046,
#Partially deleted in new
chr16	2148623	2154165	chr16:2148623-2154165	3	+	2148783	2153421	0	9	355,111,42,67,53,66,57,77,847,	0,1317,2945,3071,3232,4196,4365,4522,4695,
#Partially deleted in new
chr16	2148623	2154110	chr16:2148623-2154110	0	+	2148623	2148623	8553170	8	355,111,42,67,53,66,234,792,	0,1317,2945,3071,3232,4196,4365,4695,
#Partially deleted in new
chr16	2149981	2153389	chr16:2149981-2153389	0	+	2149981	2149981	8553170	6	70,42,67,53,66,401,	0,1587,1713,1874,2838,3007,
#Partially deleted in new
chr16	2151575	2153376	chr16:2151575-2153376	0	+	2151575	2151575	8553170	5	35,67,53,66,388,	0,119,280,1244,1413,
#Deleted in new
chr16	2153041	2154140	chr16:2153041-2154140	0	+	2153041	2153905	789624	3	4,77,563,	0,104,536,
#Deleted in new
chr16	2154796	2155358	chr16:2154796-2155358	3	-	2154796	2154796	789624	2	126,216,	0,346,
#Deleted in new
chr16	2155022	2155105	chr16:2155022-2155105	3	-	2155022	2155022	789624	1	83,	0,
#Deleted in new
chr16	2155024	2155104	chr16:2155024-2155104	3	-	2155024	2155024	8553170	1	80,	0,
#Partially deleted in new
chr16	2155697	2168515	chr16:2155697-2168515	1	+	2163920	2168080	789624	4	161,119,80,439,	0,8185,10159,12379,
#Partially deleted in new
chr16	2155764	2178129	chr16:2155764-2178129	3	+	2163920	2176574	789624	21	94,119,58,92,117,93,34,184,135,218,74,49,128,83,40,117,123,120,132,120,1570,	0,8118,10114,12312,14849,15499,15807,16426,16700,17417,17716,18023,18156,18486,19346,19536,19735,20069,20284,20500,20795,
#Partially deleted in new
chr16	2155777	2171382	chr16:2155777-2171382	0	+	2155777	2155777	8553170	6	81,119,58,92,117,119,	0,8105,10101,12299,14836,15486,
#Partially deleted in new
chr16	2155803	2168510	chr16:2155803-2168510	1	+	2163920	2168198	789624	4	55,119,58,434,	0,8079,10075,12273,
#Partially deleted in new
chr16	2155828	2172589	chr16:2155828-2172589	0	+	2163920	2168080	789624	9	30,119,80,92,117,93,34,184,125,	0,8054,10028,12248,14785,15435,15743,16362,16636,
#Partially deleted in new
chr16	2163541	2171356	chr16:2163541-2171356	0	+	2163920	2171356	789624	6	258,119,58,92,117,93,	0,341,2337,4535,7072,7722,
#Deleted in new
chr16	2173512	2175219	chr16:2173512-2175219	0	+	2173512	2173512	8553170	5	42,49,128,83,109,	0,275,408,738,1598,
#Partially deleted in new
chr16	2177179	2196525	chr16:2177179-2196525	3	-	2178549	2196432	0	20	1467,424,2007,139,102,111,92,85,89,102,118,95,109,109,131,96,146,98,52,187,	0,1722,2413,4611,6466,6651,7597,7771,7931,8127,9527,9798,9986,10173,11847,12058,12239,12893,13127,19159,
#Partially deleted in new
chr16	2181898	2185020	chr16:2181898-2185020	0	-	2181898	2181898	8553170	3	31,92,70,	0,2878,3052,
#Deleted in new
chr16	2188896	2189496	chr16:2188896-2189496	0	-	2188896	2188896	8553170	3	261,96,78,	0,341,522,
#Partially deleted in new
chr16	2204595	2206381	chr16:2204595-2206381	0	+	2206085	2206381	789624	4	263,93,184,24,	0,824,1435,1762,
#Partially deleted in new
chr16	2204646	2205470	chr16:2204646-2205470	0	+	2204646	2204646	8553170	2	259,318,	0,506,
#Partially deleted in new
chr16	2204646	2208244	chr16:2204646-2208244	0	+	2206085	2208244	789624	8	36,93,184,52,163,76,153,35,	0,773,1384,1711,1850,2388,2546,3563,
#Deleted in new
chr16	2205176	2209396	chr16:2205176-2209396	3	+	2206085	2208877	0	9	336,154,52,163,76,153,125,164,638,	0,884,1181,1320,1858,2016,3033,3273,3582,
#Deleted in new
chr16	2205203	2209396	chr16:2205203-2209396	1	+	2206085	2208877	0	9	309,184,49,163,76,153,125,164,638,	0,827,1157,1293,1831,1989,3006,3246,3555,
#Deleted in new
chr16	2205213	2209412	chr16:2205213-2209412	1	+	2206085	2208877	0	9	299,184,52,163,76,153,125,164,654,	0,817,1144,1283,1821,1979,2996,3236,3545,
#Deleted in new
chr16	2205224	2208324	chr16:2205224-2208324	0	+	2206085	2206521	789624	7	288,184,52,176,76,153,115,	0,806,1133,1259,1810,1968,2985,
#Deleted in new
chr16	2205256	2209393	chr16:2205256-2209393	0	+	2205256	2205256	8553170	8	256,154,302,76,153,125,164,635,	0,804,1101,1778,1936,2953,3193,3502,
#Deleted in new
chr16	2205449	2206880	chr16:2205449-2206880	0	+	2205449	2205449	8553170	4	426,184,52,384,	0,581,908,1047,
#Deleted in new
chr16	2205453	2208558	chr16:2205453-2208558	0	+	2206085	2208558	789624	8	59,184,52,181,76,153,125,109,	0,577,904,1025,1581,1739,2756,2996,
#Deleted in new
chr16	2205453	2207250	chr16:2205453-2207250	0	+	2206085	2206521	789624	6	59,154,52,176,76,58,	0,607,904,1030,1581,1739,
#Deleted in new
chr16	2205453	2209098	chr16:2205453-2209098	0	+	2205453	2205453	8553170	8	59,184,302,76,153,125,164,340,	0,577,904,1581,1739,2756,2996,3305,
#Deleted in new
chr16	2205453	2207326	chr16:2205453-2207326	0	+	2206085	2206749	789624	7	59,184,52,163,187,76,134,	0,577,904,1043,1289,1581,1739,
#Deleted in new
chr16	2205455	2207253	chr16:2205455-2207253	0	+	2206085	2207253	789624	6	57,154,52,181,76,61,	0,605,902,1023,1579,1737,
#Deleted in new
chr16	2205455	2207297	chr16:2205455-2207297	0	+	2205455	2205455	8553170	6	57,184,52,105,76,101,	0,575,902,1099,1579,1741,
#Deleted in new
chr16	2205455	2206778	chr16:2205455-2206778	0	+	2205455	2205455	8553170	4	57,154,52,282,	0,605,902,1041,
#Deleted in new
chr16	2205456	2206723	chr16:2205456-2206723	0	+	2205456	2205456	8553170	3	56,154,366,	0,604,901,
#Deleted in new
chr16	2205464	2208342	chr16:2205464-2208342	0	+	2206085	2207244	789624	6	48,184,52,163,153,133,	0,566,893,1032,1728,2745,
#Deleted in new
chr16	2205470	2209397	chr16:2205470-2209397	0	+	2205470	2205470	8553170	8	744,52,163,76,153,125,164,639,	0,887,1026,1564,1722,2739,2979,3288,
#Deleted in new
chr16	2205476	2206721	chr16:2205476-2206721	0	+	2205476	2205476	8553170	3	36,184,364,	0,554,881,
#Deleted in new
chr16	2205480	2208492	chr16:2205480-2208492	0	+	2205480	2205480	8553170	7	32,184,52,163,76,153,43,	0,550,877,1016,1554,1712,2969,
#Deleted in new
chr16	2205480	2208612	chr16:2205480-2208612	0	+	2206085	2206749	789624	9	32,184,52,163,187,76,153,125,163,	0,550,877,1016,1262,1554,1712,2729,2969,
#Deleted in new
chr16	2205483	2206820	chr16:2205483-2206820	0	+	2205483	2205483	8553170	4	29,184,52,324,	0,547,874,1013,
#Deleted in new
chr16	2205486	2208399	chr16:2205486-2208399	0	+	2206085	2206521	789624	7	26,184,49,176,76,153,190,	0,544,874,997,1548,1706,2723,
#Deleted in new
chr16	2205489	2208328	chr16:2205489-2208328	0	+	2206085	2206521	789624	8	23,184,52,176,76,149,168,119,	0,541,868,994,1545,1707,2367,2720,
#Deleted in new
chr16	2205493	2209412	chr16:2205493-2209412	1	+	2206085	2208735	789624	8	19,184,52,163,76,153,125,963,	0,537,864,1003,1541,1699,2716,2956,
#Deleted in new
chr16	2205730	2209416	chr16:2205730-2209416	0	+	2206085	2208473	789624	8	145,154,52,163,76,153,164,658,	0,330,627,766,1304,1462,2719,3028,
#Deleted in new
chr16	2205740	2209397	chr16:2205740-2209397	1	+	2206085	2208877	0	9	135,184,52,163,76,153,125,164,639,	0,290,617,756,1294,1452,2469,2709,3018,
#Deleted in new
chr16	2205768	2209352	chr16:2205768-2209352	1	+	2206085	2208877	0	9	107,154,52,163,76,153,125,164,594,	0,292,589,728,1266,1424,2441,2681,2990,
#Deleted in new
chr16	2206028	2209370	chr16:2206028-2209370	0	+	2206028	2206028	8553170	7	186,52,163,76,153,404,612,	0,329,468,1006,1164,2181,2730,
#Deleted in new
chr16	2206364	2207976	chr16:2206364-2207976	0	+	2206364	2206364	8553170	5	45,163,76,153,120,	0,132,670,828,1492,
#Deleted in new
chr16	2206517	2207547	chr16:2206517-2207547	0	+	2206517	2206517	8553170	3	142,76,355,	0,517,675,
#Deleted in new
chr16	2207585	2209392	chr16:2207585-2209392	0	+	2207585	2207585	8553170	2	1028,634,	0,1173,
#Deleted in new
chr16	2207826	2208538	chr16:2207826-2208538	0	+	2207826	2207826	8553170	2	508,89,	0,623,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	2209252	2211950	chr16:2209252-2211950	3	-	2209361	2210833	789624	6	204,154,102,156,129,1168,	0,300,697,873,1269,1530,
#Deleted in new
chr16	2209361	2210833	chr16:2209361-2210833	1	-	2209361	2210833	789624	5	345,102,156,129,51,	0,588,764,1160,1421,
#Deleted in new
chr16	2209653	2210145	chr16:2209653-2210145	0	-	2209653	2209653	8553170	2	53,196,	0,296,
#Deleted in new
chr16	2209978	2210905	chr16:2209978-2210905	1	-	2209999	2210833	789624	3	303,129,123,	0,543,804,
#Deleted in new
chr16	2211996	2214807	chr16:2211996-2214807	3	-	2213727	2214777	789624	2	2057,670,	0,2141,
#Deleted in new
chr16	2211996	2212863	chr16:2211996-2212863	3	+	2211996	2211996	8553170	2	159,421,	0,446,
#Deleted in new
chr16	2212261	2213899	chr16:2212261-2213899	0	-	2213727	2213899	789624	2	586,319,	0,1319,
#Partially deleted in new
chr16	2223565	2235742	chr16:2223565-2235742	3	+	2223613	2235572	789624	14	205,152,106,194,121,153,173,210,109,218,199,143,63,527,	0,4806,6004,8605,8890,9190,9445,9872,10316,10605,11017,11293,11515,11650,
#Partially deleted in new
chr16	2223579	2235742	chr16:2223579-2235742	1	+	2223613	2235572	789624	12	191,152,106,194,121,153,173,63,142,143,63,527,	0,4792,5990,8591,8876,9176,9431,9858,11060,11279,11501,11636,
#Partially deleted in new
chr16	2223593	2235742	chr16:2223593-2235742	1	+	2223613	2235234	789624	14	177,152,106,194,121,153,173,210,109,218,199,91,63,527,	0,4778,5976,8577,8862,9162,9417,9844,10288,10577,10989,11265,11487,11622,
#Partially deleted in new
chr16	2223614	2232763	chr16:2223614-2232763	0	+	2223614	2232302	789624	6	156,232,106,194,121,8,	0,4677,5955,8556,8841,9141,
#Partially deleted in new
chr16	2223715	2232908	chr16:2223715-2232908	0	+	2223838	2232908	789624	6	214,152,106,194,121,153,	0,4656,5854,8455,8740,9040,
#Partially deleted in new
chr16	2228392	2235741	chr16:2228392-2235741	0	+	2228392	2228392	8553170	5	131,2795,121,153,2731,	0,1177,4063,4363,4618,
#Partially deleted in new
chr16	2233005	2234212	chr16:2233005-2234212	0	+	2233005	2233005	8553170	3	642,109,42,	0,876,1165,
#Partially deleted in new
chr16	2233718	2234195	chr16:2233718-2234195	0	+	2233718	2233718	8553170	2	272,25,	0,452,
#Partially deleted in new
chr16	2234599	2235367	chr16:2234599-2235367	0	+	2234599	2234599	8553170	2	182,509,	0,259,
#Partially deleted in new
chr16	2235688	2236913	chr16:2235688-2236913	3	-	2235688	2235688	8553170	1	1225,	0,
#Partially deleted in new
chr16	2235815	2238711	chr16:2235815-2238711	3	+	2236816	2238418	789624	6	1145,89,84,274,252,350,	0,1222,1402,1560,1951,2546,
#Partially deleted in new
chr16	2236466	2238711	chr16:2236466-2238711	1	+	2236816	2238418	789624	7	94,183,89,84,274,252,350,	0,311,571,751,909,1300,1895,
#Partially deleted in new
chr16	2236466	2238708	chr16:2236466-2238708	1	+	2236816	2238418	789624	8	94,183,89,84,101,110,252,347,	0,311,571,751,909,1073,1300,1895,
#Partially deleted in new
chr16	2236468	2238711	chr16:2236468-2238711	1	+	2236816	2238418	789624	7	92,160,89,84,274,252,350,	0,332,569,749,907,1298,1893,
#Partially deleted in new
chr16	2236724	2238711	chr16:2236724-2238711	1	+	2236816	2238418	789624	7	236,89,84,101,110,252,350,	0,313,493,651,815,1042,1637,
#Partially deleted in new
chr16	2236825	2238000	chr16:2236825-2238000	0	+	2236825	2238000	789624	5	135,89,84,274,180,	0,212,392,550,995,
#Partially deleted in new
chr16	2239394	2251614	chr16:2239394-2251614	3	-	2239978	2251566	0	7	751,179,122,147,128,114,100,	0,3651,3923,5011,7464,11921,12120,
#Partially deleted in new
chr16	2239894	2251572	chr16:2239894-2251572	1	-	2239978	2251566	0	7	251,179,71,147,128,114,58,	0,3151,3474,4511,6964,11421,11620,
#Partially deleted in new
chr16	2239939	2252300	chr16:2239939-2252300	1	-	2239978	2246975	789624	7	206,179,122,147,128,114,616,	0,3106,3378,4466,6919,11376,11745,
#Partially deleted in new
chr16	2240036	2251591	chr16:2240036-2251591	0	-	2240036	2246975	789624	6	109,179,122,147,128,276,	0,3009,3281,4369,6822,11279,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	2240486	2241818	chr16:2240486-2241818	3	+	2240486	2240486	8553170	2	604,184,	0,1148,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	2242414	2244438	chr16:2242414-2244438	0	-	2242414	2242414	8553170	3	810,122,33,	0,903,1991,
#Partially deleted in new
chr16	2243168	2251545	chr16:2243168-2251545	0	-	2243168	2243168	8553170	4	271,147,128,230,	0,1237,3690,8147,
#Partially deleted in new
chr16	2244137	2251562	chr16:2244137-2251562	0	-	2244137	2244137	8553170	4	415,128,114,48,	0,2721,7178,7377,
#Partially deleted in new
chr16	2253115	2268412	chr16:2253115-2268412	3	-	2253963	2264643	0	8	948,142,154,103,192,156,188,358,	0,2469,9162,9624,9980,11060,11457,14939,
#Partially deleted in new
chr16	2253115	2267848	chr16:2253115-2267848	1	-	2253963	2264643	0	8	948,142,154,103,192,156,188,186,	0,2469,9162,9624,9980,11060,11457,14547,
#Partially deleted in new
chr16	2253116	2268397	chr16:2253116-2268397	1	-	2253963	2268056	0	7	947,142,154,103,192,156,343,	0,2468,9161,9623,9979,11059,14938,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	2253122	2256866	chr16:2253122-2256866	0	-	2253122	2253122	8553170	2	941,1282,	0,2462,
#Partially deleted in new
chr16	2253125	2264331	chr16:2253125-2264331	1	-	2253963	2262422	789624	6	938,142,154,103,192,156,	0,2459,9152,9614,9970,11050,
#Partially deleted in new
chr16	2253129	2267603	chr16:2253129-2267603	1	-	2253963	2264643	0	8	934,142,154,103,192,156,188,429,	0,2455,9148,9610,9966,11046,11443,14045,
#Partially deleted in new
chr16	2253138	2268066	chr16:2253138-2268066	1	-	2253963	2262422	789624	7	925,142,154,103,192,156,134,	0,2446,9139,9601,9957,11037,14794,
#Partially deleted in new
chr16	2253827	2267829	chr16:2253827-2267829	1	-	2253963	2264643	0	8	236,142,154,103,192,156,188,621,	0,1757,8450,8912,9268,10348,10745,13381,
#Partially deleted in new
chr16	2253839	2268095	chr16:2253839-2268095	1	-	2253963	2264643	789624	7	224,142,154,103,66,188,41,	0,1745,8438,8900,9256,10733,14215,
#Partially deleted in new
chr16	2253845	2268114	chr16:2253845-2268114	1	-	2253963	2264643	0	9	218,142,154,103,192,156,188,63,60,	0,1739,8432,8894,9250,10330,10727,13329,14209,
#Partially deleted in new
chr16	2253855	2268071	chr16:2253855-2268071	1	-	2253896	2268056	789624	6	208,154,103,192,156,17,	0,8422,8884,9240,10320,14199,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	2253898	2258756	chr16:2253898-2258756	0	-	2253898	2253898	8553170	2	165,3172,	0,1686,
#Partially deleted in new
chr16	2253974	2265250	chr16:2253974-2265250	0	-	2253974	2264643	789624	7	89,142,154,103,192,156,678,	0,1610,8303,8765,9121,10201,10598,
#Partially deleted in new
chr16	2254028	2268054	chr16:2254028-2268054	0	-	2254028	2264643	789624	8	35,142,154,103,192,156,188,122,	0,1556,8249,8711,9067,10147,10544,13904,
#Partially deleted in new
chr16	2255640	2268091	chr16:2255640-2268091	0	-	2262744	2264643	789624	7	86,154,103,146,156,188,37,	0,6637,7099,7501,8535,8932,12414,
#Partially deleted in new
chr16	2262207	2268114	chr16:2262207-2268114	0	-	2262207	2262207	8553170	5	224,103,192,156,60,	0,532,888,1968,5847,
#Partially deleted in new
chr16	2262753	2267852	chr16:2262753-2267852	0	-	2262753	2264643	789624	5	89,192,156,188,278,	0,342,1422,1819,4821,
#Partially deleted in new
chr16	2262811	2267246	chr16:2262811-2267246	0	-	2262811	2264643	789624	5	31,192,156,188,72,	0,284,1364,1761,4363,
#Partially deleted in new
chr16	2263095	2267833	chr16:2263095-2267833	0	-	2263095	2264643	789624	5	192,156,188,107,171,	0,1080,1477,3014,4567,
#Partially deleted in new
chr16	2263133	2268094	chr16:2263133-2268094	0	-	2263133	2264643	789624	5	154,156,188,44,40,	0,1042,1439,4041,4921,
#Partially deleted in new
chr16	2263213	2267337	chr16:2263213-2267337	0	-	2263213	2264643	789624	4	74,149,188,163,	0,969,1359,3961,
#Partially deleted in new
chr16	2263259	2267306	chr16:2263259-2267306	0	-	2263259	2264643	789624	4	28,156,188,107,	0,916,1313,3940,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	2263896	2264876	chr16:2263896-2264876	0	-	2263896	2263896	8553170	2	435,304,	0,676,
#Partially deleted in new
chr16	2264267	2266523	chr16:2264267-2266523	0	-	2264267	2264643	789624	3	64,188,414,	0,305,1842,
#Partially deleted in new
chr16	2264314	2268114	chr16:2264314-2268114	0	-	2264314	2264643	789624	4	17,188,49,60,	0,258,2874,3740,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	2265502	2267328	chr16:2265502-2267328	0	-	2265502	2265502	8553170	1	1826,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	2268154	2273418	chr16:2268154-2273418	3	+	2268154	2268154	8553170	2	111,432,	0,4832,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	2268622	2273039	chr16:2268622-2273039	0	+	2268622	2268622	8553170	2	221,53,	0,4364,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	2268662	2273124	chr16:2268662-2273124	1	+	2268662	2268662	789624	3	181,216,138,	0,3013,4324,
#Deleted in new
chr16	2270712	2270772	chr16:2270712-2270772	3	+	2270712	2270712	5263520	1	60,	0,
#Deleted in new
chr16	2271746	2271840	chr16:2271746-2271840	3	+	2271746	2271746	5263520	1	94,	0,
#Deleted in new
chr16	2274619	2274691	chr16:2274619-2274691	3	+	2274619	2274619	5263520	1	72,	0,
#Partially deleted in new
chr16	2275880	2340735	chr16:2275880-2340735	3	-	2276673	2326466	789624	33	925,74,191,171,188,195,129,173,159,220,205,274,304,187,99,151,211,156,155,130,144,182,174,121,117,260,166,128,265,80,305,207,163,	0,1716,1998,2407,3062,5146,5500,7305,8398,8898,9561,10813,12145,13553,16259,19709,21448,21885,22505,23522,24124,28088,32569,41402,41767,43700,47642,48523,50129,50532,52572,53767,64692,
#Partially deleted in new
chr16	2275880	2340746	chr16:2275880-2340746	1	-	2276673	2326466	789624	32	925,74,191,171,188,195,129,173,159,220,205,274,304,187,99,151,211,156,155,130,144,182,121,117,260,166,128,265,80,305,207,174,	0,1716,1998,2407,3062,5146,5500,7305,8398,8898,9561,10813,12145,13553,16259,19709,21448,21885,22505,23522,24124,28088,41402,41767,43700,47642,48523,50129,50532,52572,53767,64692,
#Partially deleted in new
chr16	2278294	2283741	chr16:2278294-2283741	0	-	2278294	2278294	8553170	5	164,188,195,129,556,	0,648,2732,3086,4891,
#Partially deleted in new
chr16	2281392	2283972	chr16:2281392-2283972	0	-	2281392	2281392	8553170	2	113,787,	0,1793,
#Partially deleted in new
chr16	2289047	2340597	chr16:2289047-2340597	0	-	2289047	2289047	8553170	20	573,99,151,211,156,155,130,144,182,174,121,117,260,166,128,265,80,305,207,25,	0,3092,6542,8281,8718,9338,10355,10957,14921,19402,28235,28600,30533,34475,35356,36962,37365,39405,40600,51525,
#Partially deleted in new
chr16	2323338	2329724	chr16:2323338-2329724	1	-	2323505	2326466	789624	6	350,128,265,80,305,77,	0,1065,2671,3074,5114,6309,
#Deleted in new
chr16	2332312	2332732	chr16:2332312-2332732	7	-	2332312	2332312	16724991	1	420,	0,
#Partially deleted in new
chr16	2339149	2361654	chr16:2339149-2361654	5	+	2339149	2339149	16724991	3	182,85,200,	0,21966,22305,
#Partially deleted in new
chr16	2339289	2367034	chr16:2339289-2367034	4	+	2339289	2339289	16724991	4	42,85,128,73,	0,21826,26391,27672,
#Partially deleted in new
chr16	2340921	2426699	chr16:2340921-2426699	7	+	2340921	2340921	16724991	17	452,85,128,163,260,117,154,153,99,162,307,274,205,188,190,110,1141,	0,20194,24759,26040,29416,33032,38506,45182,54918,63145,65681,69254,69699,81658,83656,84055,84637,
#Partially deleted in new
chr16	2340970	2362666	chr16:2340970-2362666	4	+	2340970	2340970	16724991	3	403,85,1212,	0,20145,20484,
#Partially deleted in new
chr16	2361143	2425685	chr16:2361143-2425685	5	+	2361143	2361143	16724991	18	661,122,163,260,117,113,154,153,99,302,261,198,120,188,177,190,73,127,	0,4543,5818,9194,12810,14199,18284,24960,34696,45464,49032,49484,51134,61436,63015,63434,63833,64415,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	2429393	2458851	chr16:2429393-2458851	0	+	2429481	2435814	789624	16	104,155,68,194,54,105,78,152,165,124,181,88,100,128,170,2307,	0,1736,6412,7735,8676,9959,10355,14255,16064,19461,19888,20434,23816,24016,26001,27151,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr16	2429393	2458854	chr16:2429393-2458854	3	+	2429481	2457020	789624	17	104,155,107,68,194,54,105,78,152,165,124,181,88,100,128,170,2310,	0,1736,3567,6412,7735,8676,9959,10355,14255,16064,19461,19888,20434,23816,24016,26001,27151,
#Partially deleted in new
chr16	2429448	2436351	chr16:2429448-2436351	0	+	2429448	2429448	8553170	4	49,155,107,546,	0,1681,3512,6357,
#Partially deleted in new
chr16	2430701	2437103	chr16:2430701-2437103	3	-	2430701	2430701	8553170	3	591,72,300,	0,5156,6102,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	2435985	2437922	chr16:2435985-2437922	0	+	2435985	2435985	8553170	1	1937,	0,
#Partially deleted in new
chr16	2443700	2449875	chr16:2443700-2449875	0	+	2443700	2449281	789624	5	100,165,124,352,48,	0,1757,5154,5410,6127,
#Deleted in new
chr16	2445391	2445457	chr16:2445391-2445457	3	+	2445391	2445391	5263520	1	66,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	2452580	2452977	chr16:2452580-2452977	3	-	2452580	2452580	8553170	1	397,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	2456251	2459966	chr16:2456251-2459966	3	-	2456251	2456251	8553170	5	330,137,145,124,53,	0,578,2558,3461,3662,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	2456834	2459979	chr16:2456834-2459979	0	-	2456834	2456834	8553170	3	132,145,267,	0,1975,2878,
#Partially deleted in new
chr16	2460079	2464963	chr16:2460079-2464963	3	+	2460144	2464668	789624	10	91,99,71,409,54,91,112,102,191,442,	0,203,543,736,1667,2069,2335,2551,3959,4442,
#Partially deleted in new
chr16	2460085	2464926	chr16:2460085-2464926	1	+	2460144	2464292	789624	9	85,99,71,409,54,91,112,102,888,	0,197,537,730,1661,2063,2329,2545,3953,
#Deleted in new
chr16	2460093	2462723	chr16:2460093-2462723	0	+	2460144	2462723	789624	7	77,71,409,54,91,112,93,	0,529,722,1653,2055,2321,2537,
#Deleted in new
chr16	2460101	2460757	chr16:2460101-2460757	0	+	2460101	2460101	8553170	2	69,475,	0,181,
#Deleted in new
chr16	2460117	2461052	chr16:2460117-2461052	0	+	2460117	2460117	8553170	3	53,99,430,	0,165,505,
#Partially deleted in new
chr16	2460117	2464962	chr16:2460117-2464962	0	+	2460117	2460117	8553170	8	53,411,409,54,91,112,102,924,	0,165,698,1629,2031,2297,2513,3921,
#Partially deleted in new
chr16	2460133	2464927	chr16:2460133-2464927	1	+	2460144	2464292	789624	9	37,99,71,409,54,91,112,102,889,	0,149,489,682,1613,2015,2281,2497,3905,
#Partially deleted in new
chr16	2460144	2464963	chr16:2460144-2464963	1	+	2461120	2464668	789624	9	237,71,409,54,91,112,102,191,442,	0,478,671,1602,2004,2270,2486,3894,4377,
#Deleted in new
chr16	2460144	2462168	chr16:2460144-2462168	0	+	2460144	2460144	8553170	4	549,409,54,20,	0,671,1602,2004,
#Deleted in new
chr16	2460156	2461449	chr16:2460156-2461449	0	+	2460156	2460156	8553170	3	225,71,634,	0,466,659,
#Partially deleted in new
chr16	2460475	2464111	chr16:2460475-2464111	0	+	2462227	2464111	789624	6	218,54,91,112,102,73,	0,1271,1673,1939,2155,3563,
#Partially deleted in new
chr16	2460936	2464963	chr16:2460936-2464963	0	+	2460936	2462496	789624	6	288,54,91,112,102,810,	0,810,1212,1478,1694,3217,
#Deleted in new
chr16	2461546	2462432	chr16:2461546-2462432	0	+	2461546	2461546	8553170	3	254,91,18,	0,602,868,
#Deleted in new
chr16	2463966	2464038	chr16:2463966-2464038	3	+	2463966	2463966	5263520	1	72,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	2464949	2468213	chr16:2464949-2468213	3	-	2464949	2464949	789624	1	3264,	0,
#Deleted in new
chr16	2471498	2474145	chr16:2471498-2474145	3	+	2471701	2474105	789624	6	1131,189,150,51,75,390,	0,1202,1486,1769,1930,2257,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	2475050	2505734	chr16:2475050-2505734	3	+	2496148	2500958	789624	7	120,1080,159,64,96,223,4931,	0,20983,23187,24306,24784,25217,25753,
#Partially deleted in new
chr16	2475117	2503286	chr16:2475117-2503286	0	+	2496148	2498296	789624	8	53,110,996,155,64,96,223,2483,	0,18479,21000,23124,24239,24717,25150,25686,
#Partially deleted in new
chr16	2475126	2502855	chr16:2475126-2502855	0	+	2496148	2500958	789624	8	44,1080,159,64,96,223,249,1146,	0,20907,23111,24230,24708,25141,25677,26583,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	2475126	2505730	chr16:2475126-2505730	1	+	2496148	2500958	789624	8	44,1080,18,159,64,96,223,4927,	0,20907,22583,23111,24230,24708,25141,25677,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	2475152	2503485	chr16:2475152-2503485	1	+	2496148	2500958	789624	8	18,1080,18,159,64,96,223,2682,	0,20881,22557,23085,24204,24682,25115,25651,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	2476557	2482173	chr16:2476557-2482173	3	+	2476557	2476557	8553170	1	5616,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	2483009	2485516	chr16:2483009-2485516	0	+	2483009	2483009	8553170	1	2507,	0,
#Partially deleted in new
chr16	2483018	2500332	chr16:2483018-2500332	0	+	2496148	2500332	789624	7	68,1080,18,159,64,96,65,	0,13015,14691,15219,16338,16816,17249,
#Partially deleted in new
chr16	2483036	2500378	chr16:2483036-2500378	0	+	2496148	2500378	789624	6	50,1080,159,64,96,111,	0,12997,15201,16320,16798,17231,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	2493596	2503453	chr16:2493596-2503453	1	+	2496148	2500958	789624	7	110,1080,159,64,96,223,2650,	0,2437,4641,5760,6238,6671,7207,
#Partially deleted in new
chr16	2496031	2520218	chr16:2496031-2520218	3	+	2496148	2519383	789624	3	1082,184,678,	0,23186,23509,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	2498321	2505733	chr16:2498321-2505733	0	+	2498321	2500304	789624	4	75,96,223,4930,	0,1513,1946,2482,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	2504533	2509560	chr16:2504533-2509560	0	+	2504533	2504533	8553170	2	1591,2515,	0,2512,
#Partially deleted in new
chr16	2513869	2520218	chr16:2513869-2520218	3	+	2514103	2519745	789624	3	313,184,678,	0,5348,5671,
#Partially deleted in new
chr16	2513964	2527955	chr16:2513964-2527955	3	+	2514103	2527955	789624	4	218,140,55,183,	0,7019,13596,13808,
#Partially deleted in new
chr16	2513975	2519679	chr16:2513975-2519679	1	+	2514103	2519383	789624	3	154,184,139,	0,5242,5565,
#Partially deleted in new
chr16	2514293	2519920	chr16:2514293-2519920	1	+	2519267	2519745	789624	3	104,184,380,	0,4924,5247,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	2516657	2517999	chr16:2516657-2517999	3	+	2516657	2516657	8553170	1	1342,	0,
#Deleted in new
chr16	2518998	2520218	chr16:2518998-2520218	1	+	2519267	2519745	789624	2	403,678,	0,542,
#Partially deleted in new
chr16	2520356	2530491	chr16:2520356-2530491	0	+	2528139	2530491	789624	10	185,140,55,213,89,145,267,102,51,235,	0,627,7204,7416,7703,7879,8095,8637,9118,9900,
#Partially deleted in new
chr16	2520364	2529698	chr16:2520364-2529698	3	+	2520458	2529563	789624	11	177,137,140,55,213,89,145,108,69,102,224,	0,404,619,7196,7408,7695,7871,8087,8285,8629,9110,
#Partially deleted in new
chr16	2520364	2531422	chr16:2520364-2531422	1	+	2520458	2529563	789624	10	177,137,140,55,213,89,145,267,102,1948,	0,404,619,7196,7408,7695,7871,8087,8629,9110,
#Partially deleted in new
chr16	2520389	2530954	chr16:2520389-2530954	1	+	2520458	2530759	789624	11	152,137,140,55,213,89,145,267,102,51,698,	0,379,594,7171,7383,7670,7846,8062,8604,9085,9867,
#Partially deleted in new
chr16	2520389	2528054	chr16:2520389-2528054	0	+	2520389	2520389	8553170	4	152,355,55,282,	0,379,7171,7383,
#Partially deleted in new
chr16	2520392	2529060	chr16:2520392-2529060	0	+	2520458	2527910	789624	9	149,137,140,213,89,145,108,69,67,	0,376,591,7380,7667,7843,8059,8257,8601,
#Partially deleted in new
chr16	2520396	2531230	chr16:2520396-2531230	1	+	2520458	2529563	8553170	10	145,137,140,55,213,89,145,108,102,1756,	0,372,587,7164,7376,7663,7839,8055,8597,9078,
#Partially deleted in new
chr16	2520400	2528013	chr16:2520400-2528013	0	+	2520400	2520400	8553170	5	141,137,140,55,241,	0,368,583,7160,7372,
#Partially deleted in new
chr16	2520402	2527879	chr16:2520402-2527879	0	+	2520402	2520402	8553170	4	139,137,140,319,	0,366,581,7158,
#Partially deleted in new
chr16	2520420	2529517	chr16:2520420-2529517	0	+	2520458	2529517	789624	9	121,137,140,55,89,145,108,102,43,	0,348,563,7140,7639,7815,8031,8573,9054,
#Partially deleted in new
chr16	2520424	2528692	chr16:2520424-2528692	0	+	2520458	2528692	789624	7	117,137,140,55,89,145,241,	0,344,559,7136,7635,7811,8027,
#Partially deleted in new
chr16	2520435	2527836	chr16:2520435-2527836	0	+	2520458	2527836	789624	5	106,137,140,43,64,	0,333,548,7137,7337,
#Deleted in new
chr16	2527079	2531422	chr16:2527079-2531422	0	+	2527079	2527079	8553170	2	51,1793,	0,2550,
#Deleted in new
chr16	2527569	2528495	chr16:2527569-2528495	0	+	2527569	2527569	8553170	4	416,89,145,44,	0,490,666,882,
#Deleted in new
chr16	2527878	2528489	chr16:2527878-2528489	0	+	2527878	2527878	8553170	3	270,145,38,	0,357,573,
#Deleted in new
chr16	2527908	2528841	chr16:2527908-2528841	0	+	2527908	2527908	8553170	4	77,89,145,390,	0,151,327,543,
#Deleted in new
chr16	2528351	2529624	chr16:2528351-2529624	0	+	2528351	2528351	8553170	4	208,69,102,150,	0,298,642,1123,
#Deleted in new
chr16	2528445	2529683	chr16:2528445-2529683	0	+	2528445	2528445	8553170	2	650,209,	0,1029,
#Deleted in new
chr16	2528702	2529532	chr16:2528702-2529532	0	+	2528702	2528702	8553170	2	16,539,	0,291,
#Deleted in new
chr16	2530034	2531408	chr16:2530034-2531408	3	-	2530329	2531073	789624	1	1374,	0,
#Deleted in new
chr16	2530315	2531417	chr16:2530315-2531417	1	-	2530343	2531073	789624	2	33,486,	0,616,
#Deleted in new
chr16	2531921	2532005	chr16:2531921-2532005	3	-	2531921	2531921	5263520	1	84,	0,
#Partially deleted in new
chr16	2537963	2603188	chr16:2537963-2603188	3	+	2538112	2597767	0	14	173,261,43,138,145,98,76,69,97,174,218,58,153,5538,	0,19739,23516,23807,27589,28392,39461,43331,43643,45448,48712,57829,59159,59687,
#Partially deleted in new
chr16	2537978	2581661	chr16:2537978-2581661	0	+	2566384	2581661	789624	5	158,98,76,64,55,	0,28377,39446,43321,43628,
#Partially deleted in new
chr16	2537996	2597920	chr16:2537996-2597920	1	+	2538112	2597672	0	12	140,261,43,138,145,98,76,69,97,174,218,270,	0,19706,23483,23774,27556,28359,39428,43298,43610,45415,48679,59654,
#Partially deleted in new
chr16	2538002	2601095	chr16:2538002-2601095	1	+	2538112	2597767	0	11	134,261,43,76,69,97,174,218,58,153,3445,	0,19700,23477,39422,43292,43604,45409,48673,57790,59120,59648,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	2538004	2539521	chr16:2538004-2539521	0	+	2538004	2538004	8553170	3	132,360,58,	0,907,1459,
#Partially deleted in new
chr16	2538019	2561530	chr16:2538019-2561530	0	+	2538112	2538585	789624	4	117,270,261,51,	0,482,19683,23460,
#Partially deleted in new
chr16	2538020	2561501	chr16:2538020-2561501	0	+	2538112	2538762	789624	4	116,153,261,22,	0,598,19682,23459,
#Partially deleted in new
chr16	2538020	2562227	chr16:2538020-2562227	0	+	2538020	2538020	8553170	3	116,261,748,	0,19682,23459,
#Partially deleted in new
chr16	2538163	2597928	chr16:2538163-2597928	1	+	2557759	2597767	789624	14	608,261,43,138,145,98,76,69,97,174,218,58,153,278,	0,19539,23316,23607,27389,28192,39261,43131,43443,45248,48512,57629,58959,59487,
#Partially deleted in new
chr16	2550602	2565614	chr16:2550602-2565614	0	+	2557759	2565614	789624	5	107,261,43,138,62,	0,7100,10877,11168,14950,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	2554059	2556060	chr16:2554059-2556060	3	-	2554059	2554059	8553170	1	2001,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	2554974	2556105	chr16:2554974-2556105	3	+	2554974	2554974	8553170	2	465,107,	0,1024,
#Partially deleted in new
chr16	2556895	2584064	chr16:2556895-2584064	0	+	2556895	2556895	8553170	9	1068,43,138,145,98,76,69,97,653,	0,4584,4875,8657,9460,20529,24399,24711,26516,
#Partially deleted in new
chr16	2557443	2561879	chr16:2557443-2561879	0	+	2557443	2557443	8553170	4	156,261,43,109,	0,259,4036,4327,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	2561470	2565096	chr16:2561470-2565096	3	-	2561470	2561470	8553170	1	3626,	0,
#Partially deleted in new
chr16	2565552	2571341	chr16:2565552-2571341	0	+	2565552	2565552	8553170	3	145,98,268,	0,803,5521,
#Partially deleted in new
chr16	2565605	2570818	chr16:2565605-2570818	0	+	2565605	2565605	8553170	3	92,98,431,	0,750,4782,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	2569042	2571936	chr16:2569042-2571936	3	-	2569042	2569042	8553170	2	432,27,	0,2867,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	2571569	2572353	chr16:2571569-2572353	3	-	2571569	2571569	8553170	2	247,40,	0,744,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	2575627	2577373	chr16:2575627-2577373	3	-	2575627	2575627	8553170	1	1746,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	2578394	2579963	chr16:2578394-2579963	3	+	2578394	2578394	8553170	1	1569,	0,
#Partially deleted in new
chr16	2581346	2583987	chr16:2581346-2583987	0	+	2581346	2583418	789624	4	17,97,174,157,	0,260,2065,2484,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	2592513	2594563	chr16:2592513-2594563	3	+	2592513	2592513	8553170	1	2050,	0,
#Deleted in new
chr16	2597880	2599718	chr16:2597880-2599718	3	-	2597880	2597880	8553170	1	1838,	0,
#Deleted in new
chr16	2598246	2598638	chr16:2598246-2598638	0	+	2598246	2598246	8553170	2	223,107,	0,285,
#Deleted in new
chr16	2599440	2601630	chr16:2599440-2601630	0	+	2599440	2599440	8553170	2	66,504,	0,1686,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	2603349	2630494	chr16:2603349-2630494	7	+	2603349	2603349	16724991	4	378,591,109,1670,	0,7112,10610,25475,
#Partially deleted in new
chr16	2603419	2614068	chr16:2603419-2614068	4	+	2603419	2603419	16724991	2	308,109,	0,10540,
#Partially deleted in new
chr16	2603473	2614071	chr16:2603473-2614071	5	+	2603473	2603473	16724991	2	254,112,	0,10486,
#Partially deleted in new
chr16	2616120	2643296	chr16:2616120-2643296	7	-	2616120	2616120	16724991	9	653,97,69,76,98,145,138,43,1068,	0,2361,2701,6569,17618,18374,22163,22549,26108,
#Partially deleted in new
chr16	2616452	2642432	chr16:2616452-2642432	5	-	2616452	2616452	16724991	9	321,97,69,76,98,145,138,43,204,	0,2029,2369,6237,17286,18042,21831,22217,25776,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	2620221	2621794	chr16:2620221-2621794	3	-	2620221	2620221	8553170	1	1573,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	2633897	2638721	chr16:2633897-2638721	4	-	2633897	2633897	16724991	2	930,1435,	0,3389,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	2644083	2645214	chr16:2644083-2645214	3	-	2644083	2644083	8553170	2	107,465,	0,666,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	2660348	2673374	chr16:2660348-2673374	3	-	2660348	2660348	8553170	3	1033,324,92,	0,2735,12934,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	2660349	2665350	chr16:2660349-2665350	0	-	2660349	2660349	8553170	1	5001,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	2661148	2673441	chr16:2661148-2673441	1	-	2661148	2661148	789624	3	2259,3160,159,	0,8262,12134,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	2661195	2673415	chr16:2661195-2673415	1	-	2661195	2661195	8553170	3	2212,976,133,	0,10399,12087,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	2667974	2671405	chr16:2667974-2671405	0	-	2667974	2667974	8553170	3	66,151,61,	0,1436,3370,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	2672325	2673444	chr16:2672325-2673444	0	-	2672325	2672325	8553170	2	245,738,	0,381,
#Partially deleted in new
chr16	2682474	2709030	chr16:2682474-2709030	3	+	2682548	2707327	0	6	326,109,92,96,126,1733,	0,13460,15431,17346,19878,24823,
#Partially deleted in new
chr16	2682527	2697279	chr16:2682527-2697279	0	+	2682527	2682527	8553170	3	273,109,104,	0,13407,14648,
#Partially deleted in new
chr16	2682532	2699302	chr16:2682532-2699302	0	+	2682532	2682532	8553170	4	268,109,92,146,	0,13402,15373,16624,
#Partially deleted in new
chr16	2682539	2707479	chr16:2682539-2707479	1	+	2682548	2707455	789624	5	261,109,96,126,182,	0,13395,17281,19813,24758,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	2683105	2684764	chr16:2683105-2684764	3	+	2683105	2683105	8553170	1	1659,	0,
#Partially deleted in new
chr16	2685613	2696032	chr16:2685613-2696032	0	+	2685613	2685613	8553170	2	688,98,	0,10321,
#Partially deleted in new
chr16	2712417	2720215	chr16:2712417-2720215	3	-	2712619	2720160	789624	6	397,170,272,163,27,101,	0,1111,1647,3300,4082,7697,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	2712418	2715565	chr16:2712418-2715565	0	-	2712418	2712418	8553170	3	396,170,1501,	0,1110,1646,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	2712423	2720551	chr16:2712423-2720551	0	-	2714286	2720160	789624	5	391,170,272,27,437,	0,1105,1641,4076,7691,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	2713071	2720551	chr16:2713071-2720551	0	-	2714286	2720160	789624	4	627,272,27,437,	0,993,3428,7043,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	2714945	2718524	chr16:2714945-2718524	0	-	2714945	2714945	8553170	1	3579,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	2737075	2750810	chr16:2737075-2750810	1	-	2737075	2737075	8553170	4	213,131,168,1266,	0,404,6476,12469,
#Deleted in new
chr16	2737090	2740804	chr16:2737090-2740804	1	-	2737090	2737090	8553170	2	198,3325,	0,389,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	2737102	2744797	chr16:2737102-2744797	1	-	2737102	2737102	789624	6	186,131,132,384,168,343,	0,377,1266,3855,6449,7352,
#Partially deleted in new
chr16	2737102	2752600	chr16:2737102-2752600	3	-	2737102	2737102	789624	6	186,131,59,168,115,159,	0,377,1339,6449,12442,15339,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	2749785	2752518	chr16:2749785-2752518	0	-	2749785	2749785	8553170	2	600,77,	0,2656,
#Partially deleted in new
chr16	2752328	2771412	chr16:2752328-2771412	3	+	2756364	2770867	0	15	518,273,108,165,78,63,33,51,93,199,6701,288,114,114,555,	0,4005,5143,5452,6141,6656,6811,7023,7240,7972,9232,16668,18023,18275,18529,
#Partially deleted in new
chr16	2752625	2763582	chr16:2752625-2763582	0	+	2756364	2763582	789624	11	229,273,108,165,78,63,33,51,93,199,2022,	0,3708,4846,5155,5844,6359,6514,6726,6943,7675,8935,
#Partially deleted in new
chr16	2752637	2761707	chr16:2752637-2761707	0	+	2757517	2761707	789624	10	209,108,165,78,63,33,51,93,199,147,	0,4834,5143,5832,6347,6502,6714,6931,7663,8923,
#Partially deleted in new
chr16	2752661	2757873	chr16:2752661-2757873	0	+	2752661	2752661	8553170	3	185,273,402,	0,3672,4810,
#Partially deleted in new
chr16	2752661	2760621	chr16:2752661-2760621	0	+	2752661	2752661	8553170	8	185,273,474,78,63,33,51,1053,	0,3672,4810,5808,6323,6478,6690,6907,
#Partially deleted in new
chr16	2752674	2771410	chr16:2752674-2771410	1	+	2757517	2771357	0	11	172,108,165,78,63,33,51,93,199,138,107,	0,4797,5106,5795,6310,6465,6677,6894,7626,8886,18629,
#Partially deleted in new
chr16	2752713	2758524	chr16:2752713-2758524	0	+	2757517	2758524	789624	4	133,108,165,55,	0,4758,5067,5756,
#Partially deleted in new
chr16	2752715	2763501	chr16:2752715-2763501	0	+	2757517	2763501	789624	10	139,108,165,78,63,33,51,93,199,1941,	0,4756,5065,5754,6269,6424,6636,6853,7585,8845,
#Partially deleted in new
chr16	2753442	2757574	chr16:2753442-2757574	0	+	2756364	2757574	789624	3	203,273,103,	0,2891,4029,
#Partially deleted in new
chr16	2757475	2760845	chr16:2757475-2760845	1	+	2757517	2760511	789624	8	104,165,78,63,33,51,93,545,	0,305,994,1509,1664,1876,2093,2825,
#Partially deleted in new
chr16	2757831	2760010	chr16:2757831-2760010	0	+	2757831	2757831	8553170	7	114,78,63,33,51,93,264,	0,638,1153,1308,1520,1737,1915,
#Deleted in new
chr16	2758853	2759731	chr16:2758853-2759731	0	+	2758853	2758853	8553170	4	194,33,51,163,	0,286,498,715,
#Deleted in new
chr16	2758907	2759548	chr16:2758907-2759548	0	+	2758907	2758907	8553170	2	265,197,	0,444,
#Deleted in new
chr16	2758923	2759843	chr16:2758923-2759843	0	+	2758923	2758923	8553170	3	249,51,275,	0,428,645,
#Deleted in new
chr16	2758947	2761807	chr16:2758947-2761807	0	+	2758947	2758947	8553170	4	455,93,199,247,	0,621,1353,2613,
#Deleted in new
chr16	2759746	2761810	chr16:2759746-2761810	0	+	2759746	2759746	8553170	3	262,199,250,	0,554,1814,
#Deleted in new
chr16	2759932	2760846	chr16:2759932-2760846	0	+	2759932	2759932	8553170	1	914,	0,
#Deleted in new
chr16	2760032	2762211	chr16:2760032-2762211	0	+	2760032	2760032	8553170	2	467,651,	0,1528,
#Deleted in new
chr16	2763866	2765368	chr16:2763866-2765368	0	+	2763866	2763866	8553170	2	72,521,	0,981,
#Deleted in new
chr16	2767506	2770258	chr16:2767506-2770258	0	+	2767506	2767506	8553170	3	755,288,397,	0,1490,2355,
#Deleted in new
chr16	2767721	2769248	chr16:2767721-2769248	0	+	2767721	2768517	789624	3	540,95,252,	0,783,1275,
#Deleted in new
chr16	2767855	2768939	chr16:2767855-2768939	0	+	2767855	2767855	8553170	2	406,435,	0,649,
#Deleted in new
chr16	2768080	2769547	chr16:2768080-2769547	0	+	2768080	2768080	8553170	2	181,551,	0,916,
#Deleted in new
chr16	2768527	2769422	chr16:2768527-2769422	0	+	2768527	2768527	8553170	2	72,426,	0,469,
#Deleted in new
chr16	2768550	2769454	chr16:2768550-2769454	0	+	2768550	2768550	8553170	2	217,458,	0,446,
#Deleted in new
chr16	2768745	2770229	chr16:2768745-2770229	0	+	2768745	2768745	8553170	2	539,602,	0,882,
#Deleted in new
chr16	2769373	2771410	chr16:2769373-2771410	0	+	2769373	2769373	8553170	3	1092,114,553,	0,1230,1484,
#Deleted in new
chr16	2769894	2770934	chr16:2769894-2770934	0	+	2769894	2769894	8553170	4	333,114,114,77,	0,457,709,963,
#Deleted in new
chr16	2770354	2771410	chr16:2770354-2771410	0	+	2770354	2770867	789624	4	111,114,192,42,	0,249,503,1014,
#Deleted in new
chr16	2770910	2771412	chr16:2770910-2771412	0	+	2770910	2771036	789624	2	139,292,	0,210,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	2771277	2772538	chr16:2771277-2772538	0	+	2771277	2771277	8553170	2	326,217,	0,1044,
#Partially deleted in new
chr16	2771413	2777277	chr16:2771413-2777277	1	-	2771471	2777239	0	5	191,109,106,135,41,	0,580,4037,5579,5823,
#Partially deleted in new
chr16	2771413	2777297	chr16:2771413-2777297	3	-	2771989	2777239	0	4	689,106,135,61,	0,4037,5579,5823,
#Partially deleted in new
chr16	2771414	2777195	chr16:2771414-2777195	1	-	2771989	2777115	789624	3	688,106,203,	0,4036,5578,
#Partially deleted in new
chr16	2771940	2777127	chr16:2771940-2777127	0	-	2771989	2777127	789624	3	162,175,135,	0,3510,5052,
#Partially deleted in new
chr16	2771942	2777272	chr16:2771942-2777272	1	-	2772039	2777239	789624	3	160,135,36,	0,5050,5294,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	2777318	2780568	chr16:2777318-2780568	3	+	2777318	2777318	8553170	1	3250,	0,
#Deleted in new
chr16	2783952	2786707	chr16:2783952-2786707	1	-	2784643	2786547	789624	6	850,170,272,163,33,206,	0,1049,1422,1846,2136,2549,
#Deleted in new
chr16	2783952	2787948	chr16:2783952-2787948	3	-	2784643	2786547	789624	7	850,170,272,163,33,103,85,	0,1049,1422,1846,2136,2549,3911,
#Deleted in new
chr16	2783952	2786841	chr16:2783952-2786841	1	-	2785065	2786547	789624	4	1219,163,33,340,	0,1846,2136,2549,
#Deleted in new
chr16	2784943	2786605	chr16:2784943-2786605	0	-	2784943	2786547	789624	4	228,272,163,104,	0,431,855,1558,
#Partially deleted in new
chr16	2796407	2796532	chr16:2796407-2796532	3	-	2796407	2796407	5263520	1	125,	0,
#Partially deleted in new
chr16	2798484	2805302	chr16:2798484-2805302	3	+	2798484	2805132	789624	5	130,166,284,158,389,	0,474,801,5904,6429,
#Deleted in new
chr16	2817179	2821719	chr16:2817179-2821719	1	+	2817268	2821605	789624	6	153,27,166,293,113,354,	0,250,621,1497,3775,4186,
#Deleted in new
chr16	2817226	2821719	chr16:2817226-2821719	3	+	2817268	2821605	789624	6	106,27,166,293,155,354,	0,203,574,1450,3728,4139,
#Deleted in new
chr16	2817276	2821418	chr16:2817276-2821418	0	+	2817276	2817963	789624	6	56,27,166,211,113,53,	0,153,524,1482,3678,4089,
#Deleted in new
chr16	2817278	2821249	chr16:2817278-2821249	0	+	2817278	2817963	789624	5	54,27,166,293,269,	0,151,522,1398,3702,
#Deleted in new
chr16	2817290	2821587	chr16:2817290-2821587	0	+	2817290	2821370	789624	6	42,27,166,287,129,222,	0,139,510,1392,3690,4075,
#Deleted in new
chr16	2817299	2817880	chr16:2817299-2817880	0	+	2817299	2817299	8553170	2	33,451,	0,130,
#Deleted in new
chr16	2817672	2821187	chr16:2817672-2821187	0	+	2817672	2817672	8553170	3	294,287,233,	0,1010,3282,
#Deleted in new
chr16	2817690	2821064	chr16:2817690-2821064	0	+	2817690	2817690	8553170	3	276,293,110,	0,986,3264,
#Deleted in new
chr16	2817878	2821695	chr16:2817878-2821695	0	+	2817878	2821605	789624	4	88,287,155,330,	0,804,3076,3487,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	2818926	2826304	chr16:2818926-2826304	0	+	2818926	2818926	8553170	2	43,335,	0,7043,
#Deleted in new
chr16	2822658	2822993	chr16:2822658-2822993	7	-	2822658	2822658	16724991	1	335,	0,
#Deleted in new
chr16	2830168	2832284	chr16:2830168-2832284	3	+	2830247	2832159	0	4	160,79,103,489,	0,246,525,1627,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	2830252	2839585	chr16:2830252-2839585	0	+	2830252	2838403	789624	4	76,79,103,1210,	0,162,441,8123,
#Deleted in new
chr16	2830294	2830981	chr16:2830294-2830981	0	+	2830294	2830294	8553170	2	34,567,	0,120,
#Deleted in new
chr16	2830303	2831975	chr16:2830303-2831975	0	+	2830303	2830303	8553170	3	25,382,180,	0,111,1492,
#Deleted in new
chr16	2830305	2831173	chr16:2830305-2831173	0	+	2830305	2830800	789624	3	23,79,480,	0,109,388,
#Deleted in new
chr16	2830367	2832282	chr16:2830367-2832282	1	+	2830423	2832159	789624	3	126,103,487,	0,326,1428,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	2839567	2842744	chr16:2839567-2842744	7	-	2839567	2839567	16724991	3	364,1452,1065,	0,580,2112,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	2839567	2842710	chr16:2839567-2842710	5	-	2839567	2839567	16724991	5	364,166,27,92,103,	0,1595,2005,2112,3040,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	2839567	2842638	chr16:2839567-2842638	5	-	2839567	2839567	16724991	2	364,2491,	0,580,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	2839567	2842476	chr16:2839567-2842476	5	-	2839567	2839567	16724991	4	364,166,92,28,	0,1595,2112,2881,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	2839567	2841848	chr16:2839567-2841848	5	-	2839567	2839567	16724991	3	364,166,169,	0,1595,2112,
#Deleted in new
chr16	2839655	2841328	chr16:2839655-2841328	5	-	2839655	2839655	16724991	4	276,161,270,166,	0,492,1154,1507,
#Partially deleted in new
chr16	2852726	2858170	chr16:2852726-2858170	3	-	2853092	2858104	789624	6	603,158,278,172,27,148,	0,1138,2847,3355,4095,5296,
#Partially deleted in new
chr16	2852729	2858154	chr16:2852729-2858154	1	-	2853092	2858104	789624	5	600,158,120,27,132,	0,1135,3404,4092,5293,
#Partially deleted in new
chr16	2852741	2855984	chr16:2852741-2855984	0	-	2852741	2852741	8553170	3	588,158,411,	0,1123,2832,
#Partially deleted in new
chr16	2853939	2857926	chr16:2853939-2857926	0	-	2856220	2857926	789624	5	83,278,172,27,290,	0,1634,2142,2882,3697,
#Partially deleted in new
chr16	2853989	2855933	chr16:2853989-2855933	0	-	2853989	2853989	8553170	4	33,86,74,360,	0,255,416,1584,
#Deleted in new
chr16	2855635	2858168	chr16:2855635-2858168	0	-	2855635	2855635	8553170	4	216,120,27,146,	0,498,1186,2387,
#Deleted in new
chr16	2855669	2857903	chr16:2855669-2857903	0	-	2855669	2855669	8553170	4	182,120,27,76,	0,464,1152,2158,
#Deleted in new
chr16	2855816	2857169	chr16:2855816-2857169	0	-	2855816	2855816	8553170	2	437,348,	0,1005,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	2857897	2859726	chr16:2857897-2859726	3	+	2857897	2857897	8553170	3	36,90,139,	0,671,1690,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	2866347	2867618	chr16:2866347-2867618	3	-	2866347	2866347	8553170	2	509,158,	0,1113,
#Partially deleted in new
chr16	2883185	2899382	chr16:2883185-2899382	3	+	2896449	2899149	789624	4	181,101,420,334,	0,12034,13166,15863,
#Partially deleted in new
chr16	2883212	2899382	chr16:2883212-2899382	1	+	2896449	2899149	789624	4	60,101,420,334,	0,12007,13139,15836,
#Partially deleted in new
chr16	2883227	2896723	chr16:2883227-2896723	0	+	2896449	2896723	789624	2	139,372,	0,13124,
#Partially deleted in new
chr16	2883258	2896896	chr16:2883258-2896896	1	+	2896449	2896884	789624	3	108,101,545,	0,11961,13093,
#Partially deleted in new
chr16	2898754	2899365	chr16:2898754-2899365	0	+	2898754	2898754	8553170	2	204,317,	0,294,
#Partially deleted in new
chr16	2911936	2951208	chr16:2911936-2951208	1	+	2929685	2948727	0	10	218,114,398,471,453,264,264,273,61,2521,	0,2239,17676,18473,21193,21779,25184,26247,28095,36751,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	2911980	2922359	chr16:2911980-2922359	0	+	2911980	2911980	8553170	4	174,114,50,21,	0,2195,3202,10358,
#Partially deleted in new
chr16	2911998	2951199	chr16:2911998-2951199	3	+	2929685	2948727	0	10	156,114,398,468,453,264,264,273,61,2512,	0,2177,17614,18414,21131,21717,25122,26185,28033,36689,
#Partially deleted in new
chr16	2912006	2929826	chr16:2912006-2929826	0	+	2929685	2929826	789624	4	148,245,114,214,	0,999,2169,17606,
#Partially deleted in new
chr16	2912023	2929916	chr16:2912023-2929916	0	+	2929685	2929916	789624	4	131,114,94,304,	0,2152,16800,17589,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	2914260	2922651	chr16:2914260-2922651	0	+	2914260	2914260	8553170	3	29,69,313,	0,1147,8078,
#Partially deleted in new
chr16	2922661	2923202	chr16:2922661-2923202	7	-	2922661	2922661	16724991	1	541,	0,
#Partially deleted in new
chr16	2930796	2940163	chr16:2930796-2940163	0	+	2930796	2940096	789624	6	84,453,264,264,273,132,	0,2333,2919,6324,7387,9235,
#Partially deleted in new
chr16	2933148	2949809	chr16:2933148-2949809	0	+	2933148	2948727	789624	8	434,264,53,94,264,273,61,1122,	0,567,1466,3183,3972,5035,6883,15539,
#Partially deleted in new
chr16	2933796	2937270	chr16:2933796-2937270	0	+	2933796	2937270	789624	4	183,56,205,150,	0,948,2876,3324,
#Partially deleted in new
chr16	2933801	2937271	chr16:2933801-2937271	0	+	2933801	2933801	8553170	3	178,53,151,	0,813,3319,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	2934880	2949813	chr16:2934880-2949813	0	+	2934880	2934880	8553170	5	1997,264,273,61,1126,	0,2240,3303,5151,13807,
#Partially deleted in new
chr16	2936524	2949811	chr16:2936524-2949811	0	+	2936524	2936524	8553170	4	860,273,61,1124,	0,1659,3507,12163,
#Partially deleted in new
chr16	2938304	2943589	chr16:2938304-2943589	0	+	2938304	2943420	789624	3	152,61,191,	0,1727,5094,
#Partially deleted in new
chr16	2938403	2949460	chr16:2938403-2949460	0	+	2938403	2948983	789624	4	53,61,26,617,	0,1628,10284,10440,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	2939713	2954276	chr16:2939713-2954276	3	-	2939713	2939713	8553170	3	267,158,85,	0,3613,14478,
#Partially deleted in new
chr16	2963943	2968380	chr16:2963943-2968380	3	+	2964520	2968020	789624	9	671,175,92,125,154,333,126,79,571,	0,915,2196,2381,2698,2966,3376,3582,3866,
#Partially deleted in new
chr16	2964215	2968380	chr16:2964215-2968380	1	+	2964520	2967546	789624	7	399,175,92,125,154,333,1061,	0,643,1924,2109,2426,2694,3104,
#Partially deleted in new
chr16	2964274	2968379	chr16:2964274-2968379	1	+	2964520	2968020	789624	9	340,175,92,125,37,333,126,79,570,	0,584,1865,2050,2484,2635,3045,3251,3535,
#Partially deleted in new
chr16	2964274	2968379	chr16:2964274-2968379	1	+	2964520	2967973	789624	8	340,175,92,125,37,333,126,570,	0,584,1865,2050,2484,2635,3045,3535,
#Partially deleted in new
chr16	2964311	2968383	chr16:2964311-2968383	1	+	2964520	2967973	789624	8	303,175,92,125,154,333,126,574,	0,547,1828,2013,2330,2598,3008,3498,
#Partially deleted in new
chr16	2964520	2968348	chr16:2964520-2968348	1	+	2964520	2967701	789624	8	94,175,92,125,154,333,126,823,	0,338,1619,1804,2121,2389,2799,3005,
#Deleted in new
chr16	2968023	2970241	chr16:2968023-2970241	0	-	2968023	2968023	8553170	2	492,354,	0,1864,
#Partially deleted in new
chr16	2968101	2980416	chr16:2968101-2980416	1	-	2968316	2979657	789624	10	414,120,78,158,173,107,494,368,265,131,	0,4533,5036,5898,6143,6448,7217,8562,11546,12184,
#Deleted in new
chr16	2968352	2969104	chr16:2968352-2969104	0	-	2968352	2968352	8553170	2	163,197,	0,555,
#Deleted in new
chr16	2969244	2973489	chr16:2969244-2973489	3	+	2969674	2971948	789624	3	596,222,1975,	0,1912,2270,
#Deleted in new
chr16	2969269	2973482	chr16:2969269-2973482	1	+	2969674	2971948	789624	3	571,105,1968,	0,2004,2245,
#Deleted in new
chr16	2969340	2972031	chr16:2969340-2972031	1	+	2971191	2971948	789624	3	103,222,517,	0,1816,2174,
#Deleted in new
chr16	2969557	2973482	chr16:2969557-2973482	1	+	2969674	2971948	789624	2	283,1968,	0,1957,
#Deleted in new
chr16	2970977	2971982	chr16:2970977-2971982	1	+	2971191	2971948	789624	2	401,468,	0,537,
#Deleted in new
chr16	2971689	2973482	chr16:2971689-2973482	0	-	2971689	2971689	8553170	2	414,65,	0,1728,
#Partially deleted in new
chr16	2972790	2980539	chr16:2972790-2980539	3	-	2972952	2979657	0	9	274,78,158,173,107,494,368,265,254,	0,347,1209,1454,1759,2528,3873,6857,7495,
#Partially deleted in new
chr16	2972790	2980391	chr16:2972790-2980391	1	-	2973047	2979657	0	9	274,116,158,173,107,494,368,265,106,	0,347,1209,1454,1759,2528,3873,6857,7495,
#Deleted in new
chr16	2972792	2974268	chr16:2972792-2974268	0	-	2974000	2974268	789624	3	423,158,24,	0,1207,1452,
#Deleted in new
chr16	2972809	2974795	chr16:2972809-2974795	0	-	2972809	2972809	8553170	5	255,78,158,173,246,	0,328,1190,1435,1740,
#Deleted in new
chr16	2972812	2973602	chr16:2972812-2973602	0	-	2972812	2972812	8553170	2	252,465,	0,325,
#Partially deleted in new
chr16	2972818	2980424	chr16:2972818-2980424	1	-	2972952	2977014	0	9	246,78,158,173,107,494,368,129,139,	0,319,1181,1426,1731,2500,3845,6989,7467,
#Partially deleted in new
chr16	2972848	2980439	chr16:2972848-2980439	1	-	2972952	2979657	0	9	216,78,158,173,107,494,161,265,154,	0,289,1151,1396,1701,2470,3815,6799,7437,
#Partially deleted in new
chr16	2972850	2980479	chr16:2972850-2980479	1	-	2972952	2977014	0	9	214,78,158,173,107,494,368,105,194,	0,287,1149,1394,1699,2468,3813,6957,7435,
#Deleted in new
chr16	2972994	2977526	chr16:2972994-2977526	0	-	2973384	2977014	789624	8	70,308,158,173,107,494,368,313,	0,143,1005,1250,1555,2324,3669,4219,
#Partially deleted in new
chr16	2975339	2980438	chr16:2975339-2980438	0	-	2975339	2977014	789624	4	473,368,97,153,	0,1324,4476,4946,
#Partially deleted in new
chr16	2975652	2980323	chr16:2975652-2980323	0	-	2975652	2979657	789624	5	160,108,368,265,105,	0,329,1011,3995,4566,
#Partially deleted in new
chr16	2975681	2980476	chr16:2975681-2980476	0	-	2975681	2979657	789624	4	131,368,289,191,	0,982,3966,4604,
#Partially deleted in new
chr16	2975748	2980401	chr16:2975748-2980401	0	-	2975748	2979657	789624	4	64,368,265,183,	0,915,3899,4470,
#Partially deleted in new
chr16	2976889	2980282	chr16:2976889-2980282	0	-	2976889	2979657	789624	3	142,289,64,	0,2758,3329,
#Deleted in new
chr16	2979472	2980457	chr16:2979472-2980457	0	-	2979472	2979472	8553170	2	440,172,	0,813,
#Deleted in new
chr16	2979494	2980394	chr16:2979494-2980394	0	-	2979494	2979494	8553170	2	442,109,	0,791,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	2981174	2981591	chr16:2981174-2981591	3	-	2981174	2981174	8553170	1	417,	0,
#Partially deleted in new
chr16	2988255	3002016	chr16:2988255-3002016	3	+	2988276	3001586	789624	35	88,33,30,33,36,33,36,54,30,33,30,33,36,33,36,36,33,54,36,33,141,30,33,33,30,132,45,42,33,63,30,60,114,54,456,	0,334,1267,1718,1831,2199,2296,2792,4549,4675,6442,6550,6671,7028,7146,7363,7483,7601,8240,8417,8689,9133,9547,10100,10238,10592,11000,11646,11830,12036,12181,12298,12458,13025,13305,
#Deleted in new
chr16	2988960	2992959	chr16:2988960-2992959	3	+	2988960	2988960	8553170	8	65,30,33,36,36,54,30,29,	0,562,1013,1126,1591,2087,3844,3970,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	2989053	2993504	chr16:2989053-2993504	0	+	2989053	2989053	5263520	5	499,501,54,60,1102,	0,1033,1994,2324,3349,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	2990193	2994509	chr16:2990193-2994509	0	+	2990193	2990193	8553170	4	163,36,54,3132,	0,358,854,1184,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	3003430	3005101	chr16:3003430-3005101	3	-	3003430	3003430	8553170	2	367,241,	0,1430,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	3006119	3007388	chr16:3006119-3007388	3	+	3006119	3006119	8553170	1	1269,	0,
#Deleted in new
chr16	3012455	3014505	chr16:3012455-3014505	3	+	3013362	3014016	789624	1	2050,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	3014711	3020071	chr16:3014711-3020071	3	-	3015358	3016021	789624	3	1331,336,72,	0,3437,5288,
#Partially deleted in new
chr16	3014712	3018187	chr16:3014712-3018187	1	-	3015358	3016021	789624	2	1330,39,	0,3436,
#Partially deleted in new
chr16	3014856	3018170	chr16:3014856-3018170	1	-	3015154	3016021	789624	3	325,114,22,	0,1072,3292,
#Partially deleted in new
chr16	3018444	3022086	chr16:3018444-3022086	1	+	3021267	3021826	789624	4	92,105,135,316,	0,2770,3110,3326,
#Deleted in new
chr16	3020311	3022383	chr16:3020311-3022383	3	+	3020397	3021826	0	4	180,105,135,613,	0,903,1243,1459,
#Deleted in new
chr16	3020358	3022383	chr16:3020358-3022383	1	+	3020397	3021826	0	3	133,135,613,	0,1196,1412,
#Deleted in new
chr16	3020367	3021963	chr16:3020367-3021963	0	+	3020397	3021614	789624	4	124,131,135,193,	0,821,1187,1403,
#Deleted in new
chr16	3020374	3022383	chr16:3020374-3022383	1	+	3020397	3021954	789624	3	385,135,613,	0,1180,1396,
#Deleted in new
chr16	3020378	3021207	chr16:3020378-3021207	0	+	3020397	3021207	789624	2	113,48,	0,781,
#Deleted in new
chr16	3020389	3022383	chr16:3020389-3022383	0	+	3020389	3020389	8553170	3	930,135,613,	0,1165,1381,
#Deleted in new
chr16	3022619	3024246	chr16:3022619-3024246	3	-	3022862	3023941	789624	4	379,129,57,400,	0,613,854,1227,
#Deleted in new
chr16	3022624	3023961	chr16:3022624-3023961	1	-	3022862	3023941	789624	3	374,129,115,	0,608,1222,
#Deleted in new
chr16	3022624	3024269	chr16:3022624-3024269	0	-	3022624	3022624	8553170	3	374,736,89,	0,608,1556,
#Deleted in new
chr16	3022625	3024215	chr16:3022625-3024215	0	-	3022625	3022625	8553170	4	373,298,122,35,	0,607,1221,1555,
#Deleted in new
chr16	3022628	3024234	chr16:3022628-3024234	1	-	3022862	3023505	789624	4	370,129,57,54,	0,604,845,1552,
#Deleted in new
chr16	3022662	3024261	chr16:3022662-3024261	0	-	3022662	3022662	8553170	2	336,1029,	0,570,
#Deleted in new
chr16	3022675	3024261	chr16:3022675-3024261	1	-	3022862	3023941	789624	5	323,129,57,286,50,	0,557,798,1171,1536,
#Deleted in new
chr16	3022840	3024273	chr16:3022840-3024273	1	-	3022862	3023941	789624	3	158,180,427,	0,392,1006,
#Deleted in new
chr16	3022917	3024286	chr16:3022917-3024286	0	-	3022917	3023941	789624	5	81,129,57,122,106,	0,315,556,929,1263,
#Partially deleted in new
chr16	3024026	3026781	chr16:3024026-3026781	0	+	3024026	3024026	8553170	7	339,116,243,38,49,72,103,	0,1681,1897,2224,2338,2489,2652,
#Partially deleted in new
chr16	3024030	3027754	chr16:3024030-3027754	3	+	3024326	3027657	789624	13	335,116,65,104,38,49,72,103,50,63,111,135,178,	0,1677,1893,2032,2220,2334,2485,2648,2836,2980,3139,3335,3546,
#Partially deleted in new
chr16	3024030	3026515	chr16:3024030-3026515	0	+	3024030	3024030	8553170	2	335,808,	0,1677,
#Partially deleted in new
chr16	3024040	3027755	chr16:3024040-3027755	1	+	3025740	3027657	789624	14	46,173,112,65,104,38,49,72,103,50,63,111,135,179,	0,152,1671,1883,2022,2210,2324,2475,2638,2826,2970,3129,3325,3536,
#Partially deleted in new
chr16	3024042	3026550	chr16:3024042-3026550	0	+	3024042	3024042	8553170	4	323,581,49,35,	0,1665,2322,2473,
#Partially deleted in new
chr16	3024053	3027722	chr16:3024053-3027722	1	+	3025740	3027657	789624	13	312,112,65,104,38,49,72,103,50,63,111,135,146,	0,1658,1870,2009,2197,2311,2462,2625,2813,2957,3116,3312,3523,
#Partially deleted in new
chr16	3024059	3026541	chr16:3024059-3026541	0	+	3024059	3024059	8553170	6	306,116,65,226,49,26,	0,1648,1864,2003,2305,2456,
#Partially deleted in new
chr16	3024060	3026762	chr16:3024060-3026762	0	+	3024060	3024060	8553170	6	305,116,365,49,72,84,	0,1647,1863,2304,2455,2618,
#Partially deleted in new
chr16	3024063	3027749	chr16:3024063-3027749	1	+	3024326	3027657	789624	12	302,116,65,104,38,49,72,103,50,63,111,173,	0,1644,1860,1999,2187,2301,2452,2615,2803,2947,3106,3513,
#Partially deleted in new
chr16	3024137	3026351	chr16:3024137-3026351	0	+	3024137	3024137	8553170	5	228,116,65,104,101,	0,1570,1786,1925,2113,
#Deleted in new
chr16	3027681	3031974	chr16:3027681-3031974	0	-	3027681	3027681	8553170	7	592,121,131,150,1051,117,1040,	0,666,1018,1598,1863,3014,3253,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	3027683	3033002	chr16:3027683-3033002	1	-	3028105	3030589	789624	8	590,121,131,150,195,147,117,2068,	0,664,1016,1596,1861,2765,3012,3251,
#Partially deleted in new
chr16	3027711	3036926	chr16:3027711-3036926	3	-	3028105	3035496	789624	10	562,121,131,150,195,147,117,216,312,33,	0,636,988,1568,1833,2737,2984,3223,7503,9182,
#Partially deleted in new
chr16	3027711	3036926	chr16:3027711-3036926	1	-	3028105	3035496	789624	11	562,121,131,150,195,147,117,216,99,312,33,	0,636,988,1568,1833,2737,2984,3223,3698,7503,9182,
#Partially deleted in new
chr16	3027866	3035541	chr16:3027866-3035541	1	-	3028105	3035496	789624	9	407,121,131,150,195,147,117,216,327,	0,481,833,1413,1678,2582,2829,3068,7348,
#Partially deleted in new
chr16	3029969	3036926	chr16:3029969-3036926	0	-	3029969	3029969	8553170	4	843,216,312,33,	0,965,5245,6924,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	3037402	3053833	chr16:3037402-3053833	1	-	3037402	3037402	8553170	6	603,137,121,98,130,2174,	0,1098,1571,5111,9514,14257,
#Partially deleted in new
chr16	3046680	3060726	chr16:3046680-3060726	3	+	3046917	3059098	789624	10	336,133,136,293,177,85,83,153,258,1900,	0,734,3328,3573,10352,10629,10850,11500,11731,12146,
#Partially deleted in new
chr16	3046680	3055949	chr16:3046680-3055949	1	+	3047543	3055949	789624	5	336,133,136,292,120,	0,734,3328,3573,9149,
#Partially deleted in new
chr16	3047530	3056162	chr16:3047530-3056162	0	+	3047530	3047530	8553170	4	17,136,293,333,	0,2478,2723,8299,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	3051095	3056232	chr16:3051095-3056232	3	-	3051095	3051095	8553170	2	3937,497,	0,4640,
#Partially deleted in new
chr16	3053579	3056019	chr16:3053579-3056019	0	-	3053579	3053579	8553170	3	43,93,284,	0,1360,2156,
#Partially deleted in new
chr16	3053587	3057197	chr16:3053587-3057197	0	-	3053587	3053587	8553170	4	32,93,210,148,	0,1352,2148,3462,
#Partially deleted in new
chr16	3054915	3057213	chr16:3054915-3057213	0	-	3054915	3054915	8553170	3	117,210,164,	0,820,2134,
#Partially deleted in new
chr16	3054986	3059370	chr16:3054986-3059370	1	-	3054986	3054986	8553170	4	46,210,163,375,	0,749,3553,4009,
#Partially deleted in new
chr16	3056793	3058306	chr16:3056793-3058306	0	+	3056793	3056793	8553170	4	416,85,83,126,	0,516,737,1387,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	3057138	3058447	chr16:3057138-3058447	0	-	3057138	3057138	8553170	2	66,935,	0,374,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	3057860	3059085	chr16:3057860-3059085	0	-	3057860	3057860	8553170	3	157,163,90,	0,679,1135,
#Deleted in new
chr16	3058455	3059308	chr16:3058455-3059308	0	-	3058455	3058455	8553170	2	247,313,	0,540,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	3065296	3069667	chr16:3065296-3069667	3	+	3065811	3069355	789624	7	198,43,39,60,27,60,678,	0,487,2080,2257,2687,2883,3693,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	3065311	3069551	chr16:3065311-3069551	1	+	3065811	3069355	789624	6	183,43,237,27,60,562,	0,472,2065,2672,2868,3678,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	3065311	3069667	chr16:3065311-3069667	1	+	3065811	3069355	789624	6	183,46,39,60,27,678,	0,469,2065,2242,2672,3678,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	3065321	3069547	chr16:3065321-3069547	1	+	3065811	3069355	789624	8	173,43,39,60,27,60,120,267,	0,462,2055,2232,2662,2858,3668,3959,
#Partially deleted in new
chr16	3065321	3069376	chr16:3065321-3069376	1	+	3067391	3069355	789624	6	173,39,60,27,60,387,	0,2055,2232,2662,2858,3668,
#Partially deleted in new
chr16	3065354	3067834	chr16:3065354-3067834	0	+	3065354	3065354	8553170	2	472,458,	0,2022,
#Partially deleted in new
chr16	3065357	3069355	chr16:3065357-3069355	1	+	3065811	3069355	789624	6	137,43,39,60,27,366,	0,426,2019,2196,2626,3632,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	3065368	3069551	chr16:3065368-3069551	1	+	3065811	3069355	789624	7	126,46,39,60,27,60,562,	0,412,2008,2185,2615,2811,3621,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	3065368	3069543	chr16:3065368-3069543	1	+	3065811	3069355	789624	6	458,39,60,27,60,554,	0,2008,2185,2615,2811,3621,
#Partially deleted in new
chr16	3065376	3069368	chr16:3065376-3069368	1	+	3065811	3069355	789624	8	118,46,43,39,60,27,60,379,	0,265,407,2000,2177,2607,2803,3613,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	3065379	3069546	chr16:3065379-3069546	1	+	3065811	3069355	789624	8	115,46,39,60,27,60,120,266,	0,401,1997,2174,2604,2800,3610,3901,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	3065383	3069728	chr16:3065383-3069728	1	+	3065811	3069355	789624	7	304,43,39,60,27,60,739,	0,400,1993,2170,2600,2796,3606,
#Partially deleted in new
chr16	3065391	3069326	chr16:3065391-3069326	0	+	3065811	3069326	789624	6	103,46,237,27,60,337,	0,389,1985,2592,2788,3598,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	3065403	3069552	chr16:3065403-3069552	1	+	3065811	3069355	789624	8	91,67,43,39,60,27,60,563,	0,217,380,1973,2150,2580,2776,3586,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	3065609	3069551	chr16:3065609-3069551	1	+	3065811	3069355	789624	7	101,43,39,60,27,60,562,	0,174,1767,1944,2374,2570,3380,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	3065609	3069548	chr16:3065609-3069548	1	+	3065811	3069355	789624	6	46,43,39,27,60,559,	0,174,1767,2374,2570,3380,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	3065613	3069532	chr16:3065613-3069532	1	+	3065811	3069355	789624	7	42,43,39,60,27,60,543,	0,170,1763,1940,2370,2566,3376,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	3065630	3069819	chr16:3065630-3069819	1	+	3065811	3069355	789624	6	57,43,39,27,60,830,	0,153,1746,2353,2549,3359,
#Partially deleted in new
chr16	3065630	3067888	chr16:3065630-3067888	0	+	3065630	3065630	8553170	3	25,43,512,	0,153,1746,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	3065638	3069640	chr16:3065638-3069640	1	+	3065811	3069355	789624	6	49,43,237,27,60,651,	0,145,1738,2345,2541,3351,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	3065638	3068665	chr16:3065638-3068665	0	+	3065638	3065638	8553170	3	49,43,1289,	0,145,1738,
#Partially deleted in new
chr16	3065639	3069269	chr16:3065639-3069269	0	+	3065811	3069269	789624	4	187,39,60,280,	0,1737,2540,3350,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	3065639	3069551	chr16:3065639-3069551	1	+	3065811	3069355	789624	6	48,43,39,60,60,562,	0,144,1737,1914,2540,3350,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	3065640	3082192	chr16:3065640-3082192	0	+	3065811	3081959	789624	6	70,43,237,27,60,560,	0,143,1736,2343,2539,15992,
#Partially deleted in new
chr16	3065652	3069396	chr16:3065652-3069396	1	+	3065811	3069355	789624	7	35,46,39,60,27,60,407,	0,128,1724,1901,2331,2527,3337,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	3065653	3069551	chr16:3065653-3069551	1	+	3065811	3069355	789624	8	34,43,39,60,27,60,120,271,	0,130,1723,1900,2330,2526,3336,3627,
#Partially deleted in new
chr16	3065661	3069514	chr16:3065661-3069514	1	+	3065811	3069355	789624	5	165,237,27,60,525,	0,1715,2322,2518,3328,
#Partially deleted in new
chr16	3065661	3069375	chr16:3065661-3069375	1	+	3065811	3069355	789624	6	26,43,171,27,60,386,	0,122,1781,2322,2518,3328,
#Partially deleted in new
chr16	3065662	3069440	chr16:3065662-3069440	1	+	3065811	3069355	789624	7	48,46,39,60,27,60,451,	0,118,1714,1891,2321,2517,3327,
#Partially deleted in new
chr16	3065676	3069409	chr16:3065676-3069409	1	+	3065811	3069355	789624	6	34,43,39,27,60,420,	0,107,1700,2307,2503,3313,
#Partially deleted in new
chr16	3065711	3069368	chr16:3065711-3069368	1	+	3065811	3069355	789624	4	115,237,60,379,	0,1665,2468,3278,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	3065783	3069667	chr16:3065783-3069667	1	+	3065811	3069355	789624	5	43,39,60,60,678,	0,1593,1770,2396,3206,
#Partially deleted in new
chr16	3065811	3069355	chr16:3065811-3069355	1	+	3065811	3069355	789624	4	15,39,27,366,	0,1565,2172,3178,
#Partially deleted in new
chr16	3067803	3069412	chr16:3067803-3069412	0	+	3067803	3067803	8553170	4	207,60,120,132,	0,376,1186,1477,
#Partially deleted in new
chr16	3068117	3069411	chr16:3068117-3069411	0	+	3068117	3068117	8553170	2	122,422,	0,872,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	3069522	3069651	chr16:3069522-3069651	3	+	3069522	3069522	8553170	1	129,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	3086142	3086300	chr16:3086142-3086300	3	+	3086142	3086142	8553170	1	158,	0,
#Partially deleted in new
chr16	3088889	3099317	chr16:3088889-3099317	3	-	3089090	3092937	789624	6	1757,58,65,268,463,128,	0,2650,2874,3159,3652,10300,
#Partially deleted in new
chr16	3088893	3092860	chr16:3088893-3092860	1	-	3089090	3092772	789624	5	1753,58,65,268,319,	0,2646,2870,3155,3648,
#Partially deleted in new
chr16	3088893	3099292	chr16:3088893-3099292	1	-	3089090	3090251	789624	5	1753,58,65,268,103,	0,2646,2870,3155,10296,
#Partially deleted in new
chr16	3088988	3099295	chr16:3088988-3099295	1	-	3089090	3092794	789624	5	1658,58,65,463,106,	0,2551,2775,3553,10201,
#Partially deleted in new
chr16	3090231	3093236	chr16:3090231-3093236	0	-	3090231	3090231	8553170	4	415,58,65,1188,	0,1308,1532,1817,
#Partially deleted in new
chr16	3090233	3099228	chr16:3090233-3099228	0	-	3090233	3090251	8553170	4	413,58,65,39,	0,1306,1530,8956,
#Partially deleted in new
chr16	3090551	3099261	chr16:3090551-3099261	1	-	3091587	3092937	789624	5	95,58,65,328,72,	0,988,1212,2125,8638,
#Partially deleted in new
chr16	3092450	3099270	chr16:3092450-3099270	0	-	3092450	3092450	8553170	2	554,81,	0,6739,
#Partially deleted in new
chr16	3096449	3099292	chr16:3096449-3099292	0	-	3096449	3096449	8553170	2	32,103,	0,2740,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	3106763	3109576	chr16:3106763-3109576	3	+	3106763	3106763	8553170	3	67,83,152,	0,1485,2661,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	3110459	3134869	chr16:3110459-3134869	3	-	3110459	3110459	8553170	7	495,93,1552,406,357,93,236,	0,4335,4508,18788,21287,22390,24174,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	3110511	3112489	chr16:3110511-3112489	0	-	3110511	3110511	8553170	2	443,207,	0,1771,
#Partially deleted in new
chr16	3112559	3120517	chr16:3112559-3120517	3	+	3113430	3120325	789624	7	123,139,214,92,121,111,1262,	0,789,2795,3269,3867,6345,6696,
#Partially deleted in new
chr16	3112572	3120483	chr16:3112572-3120483	1	+	3113430	3120325	789624	7	110,71,214,92,121,111,1228,	0,844,2782,3256,3854,6332,6683,
#Partially deleted in new
chr16	3112578	3120515	chr16:3112578-3120515	1	+	3113430	3120325	789624	7	372,139,214,92,121,111,1260,	0,770,2776,3250,3848,6326,6677,
#Partially deleted in new
chr16	3112660	3115911	chr16:3112660-3115911	0	+	3113430	3115911	789624	4	290,139,214,83,	0,688,2694,3168,
#Partially deleted in new
chr16	3112794	3119496	chr16:3112794-3119496	0	+	3113430	3119496	789624	7	156,71,214,92,121,111,241,	0,622,2560,3034,3632,6110,6461,
#Partially deleted in new
chr16	3115520	3119760	chr16:3115520-3119760	0	+	3115520	3119760	789624	4	48,92,121,505,	0,308,906,3735,
#Partially deleted in new
chr16	3116041	3124607	chr16:3116041-3124607	0	-	3116041	3116041	8553170	2	478,121,	0,8445,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	3116455	3132053	chr16:3116455-3132053	1	-	3116455	3116455	8553170	5	64,63,193,175,35,	0,12792,13005,15291,15563,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	3125528	3129299	chr16:3125528-3129299	0	-	3125528	3125528	8553170	2	438,52,	0,3719,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	3125599	3129554	chr16:3125599-3129554	0	-	3125599	3125599	8553170	2	367,94,	0,3861,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	3128671	3134882	chr16:3128671-3134882	1	-	3128671	3128671	8553170	3	982,357,253,	0,3075,5958,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	3128832	3132042	chr16:3128832-3132042	0	-	3128832	3128832	8553170	2	821,296,	0,2914,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	3129776	3137434	chr16:3129776-3137434	0	+	3137280	3137434	789624	2	280,269,	0,7389,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	3131404	3132349	chr16:3131404-3132349	0	-	3131404	3131404	8553170	3	196,357,27,	0,342,918,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	3131667	3134827	chr16:3131667-3134827	0	-	3131667	3131667	8553170	2	436,198,	0,2962,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	3131756	3134856	chr16:3131756-3134856	1	-	3131756	3131756	8553170	3	347,345,227,	0,1093,2873,
#Partially deleted in new
chr16	3134922	3142803	chr16:3134922-3142803	3	+	3137280	3141347	789624	7	187,70,514,124,74,124,2115,	0,395,2243,3495,3822,4052,5766,
#Partially deleted in new
chr16	3135027	3142805	chr16:3135027-3142805	1	+	3137280	3141347	789624	6	360,514,124,74,124,2117,	0,2138,3390,3717,3947,5661,
#Partially deleted in new
chr16	3135132	3141779	chr16:3135132-3141779	1	+	3137280	3141347	789624	6	313,514,124,74,124,1091,	0,2033,3285,3612,3842,5556,
#Partially deleted in new
chr16	3135137	3142708	chr16:3135137-3142708	1	+	3137280	3141347	789624	7	250,514,124,74,124,1665,245,	0,2028,3280,3607,3837,5551,7326,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	3135137	3142804	chr16:3135137-3142804	0	+	3135137	3135137	8553170	2	250,5639,	0,2028,
#Partially deleted in new
chr16	3135158	3142804	chr16:3135158-3142804	0	+	3137280	3138392	789624	6	229,514,188,74,124,2116,	0,2007,3195,3586,3816,5530,
#Partially deleted in new
chr16	3137403	3141532	chr16:3137403-3141532	0	+	3137403	3140713	789624	4	276,124,124,844,	0,1014,1571,3285,
#Partially deleted in new
chr16	3137649	3141355	chr16:3137649-3141355	0	+	3137649	3141347	789624	3	30,124,667,	0,768,3039,
#Partially deleted in new
chr16	3144014	3149808	chr16:3144014-3149808	7	+	3144014	3144014	16724991	11	75,141,195,89,111,168,223,117,75,104,114,	0,169,438,728,1653,1903,3243,3788,4309,4921,5680,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	3144218	3147088	chr16:3144218-3147088	4	+	3144218	3144218	16724991	4	106,89,795,1171,	0,524,765,1699,
#Partially deleted in new
chr16	3144242	3149963	chr16:3144242-3149963	5	+	3144242	3144242	16724991	10	82,195,89,111,168,223,117,75,104,269,	0,210,500,1425,1675,3015,3560,4081,4693,5452,
#Deleted in new
chr16	3147127	3148073	chr16:3147127-3148073	4	+	3147127	3147127	16724991	2	353,271,	0,675,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	3156735	3157483	chr16:3156735-3157483	3	-	3156735	3156735	8553170	1	748,	0,
#Partially deleted in new
chr16	3181232	3184018	chr16:3181232-3184018	3	-	3181232	3181232	8553170	2	213,241,	0,2545,
#Partially deleted in new
chr16	3188211	3224779	chr16:3188211-3224779	3	+	3188211	3188211	8553170	4	268,50,100,211,	0,1537,3026,36357,
#Partially deleted in new
chr16	3204246	3205188	chr16:3204246-3205188	3	+	3204246	3205185	789624	1	942,	0,
#Deleted in new
chr16	3215610	3216543	chr16:3215610-3216543	7	+	3215610	3215610	16724991	1	933,	0,
#Partially deleted in new
chr16	3222324	3235360	chr16:3222324-3235360	1	-	3223891	3233755	789624	5	2289,124,89,331,249,	0,10096,10508,11181,12787,
#Partially deleted in new
chr16	3222324	3235456	chr16:3222324-3235456	3	-	3223891	3233755	789624	5	2289,127,89,331,470,	0,10096,10508,11181,12662,
#Partially deleted in new
chr16	3222341	3235457	chr16:3222341-3235457	1	-	3223891	3233755	789624	5	2269,127,89,331,346,	0,10079,10491,11164,12770,
#Partially deleted in new
chr16	3222344	3235167	chr16:3222344-3235167	1	-	3223891	3233755	789624	5	2269,127,89,331,532,	0,10076,10488,11161,12291,
#Partially deleted in new
chr16	3223335	3235186	chr16:3223335-3235186	1	-	3223891	3233755	789624	5	1275,127,89,331,551,	0,9085,9497,10170,11300,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	3223497	3227805	chr16:3223497-3227805	0	-	3223497	3223497	8553170	1	4308,	0,
#Partially deleted in new
chr16	3223891	3235070	chr16:3223891-3235070	1	-	3223891	3233755	789624	5	719,127,89,331,84,	0,8529,8941,9614,11095,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	3232430	3234195	chr16:3232430-3234195	0	-	3232430	3232430	8553170	3	117,89,690,	0,402,1075,
#Partially deleted in new
chr16	3233626	3236221	chr16:3233626-3236221	0	-	3233626	3233755	789624	3	210,249,254,	0,1485,2341,
#Deleted in new
chr16	3234794	3236003	chr16:3234794-3236003	0	-	3234794	3234794	8553170	2	566,71,	0,1138,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	3242027	3256627	chr16:3242027-3256627	3	-	3243140	3256587	0	10	1667,33,33,116,23,231,96,350,633,317,	0,1832,2226,2445,4497,4988,6881,7403,12130,14283,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	3242027	3256627	chr16:3242027-3256627	1	-	3243140	3256587	789624	10	1667,33,33,116,23,231,96,350,93,317,	0,1832,2226,2445,4497,4988,6881,7403,9929,14283,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	3242027	3256627	chr16:3242027-3256627	0	-	3244170	3256587	789624	9	1667,33,151,116,23,231,96,350,317,	0,1832,2108,2445,4497,4988,6881,7403,14283,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	3242027	3256627	chr16:3242027-3256627	0	-	3244170	3256587	789624	10	1667,33,151,116,23,231,96,350,633,317,	0,1832,2108,2445,4497,4988,6881,7403,12130,14283,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	3242027	3256627	chr16:3242027-3256627	0	-	3247227	3256587	789624	11	1667,33,33,116,23,231,98,96,350,633,317,	0,1832,2226,2445,4497,4988,6437,6881,7403,12130,14283,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	3242027	3256627	chr16:3242027-3256627	0	-	3244170	3256587	789624	11	1667,33,151,116,23,231,96,350,93,633,317,	0,1832,2108,2445,4497,4988,6881,7403,9929,12130,14283,
#Partially deleted in new
chr16	3243140	3256587	chr16:3243140-3256587	1	-	3243140	3256587	0	9	554,33,33,116,23,231,96,350,277,	0,719,1113,1332,3384,3875,5768,6290,13170,
#Partially deleted in new
chr16	3243140	3256587	chr16:3243140-3256587	0	-	3247235	3256587	789624	7	554,33,33,116,23,231,277,	0,719,1113,1332,3384,3875,13170,
#Partially deleted in new
chr16	3243140	3256587	chr16:3243140-3256587	1	-	3243690	3256587	0	9	554,208,33,116,23,231,96,350,277,	0,719,1113,1332,3384,3875,5768,6290,13170,
#Partially deleted in new
chr16	3243140	3256587	chr16:3243140-3256587	0	-	3247235	3256587	789624	6	554,33,23,231,633,277,	0,719,3384,3875,11017,13170,
#Partially deleted in new
chr16	3243140	3256587	chr16:3243140-3256587	0	-	3244582	3256587	789624	6	554,33,33,116,23,277,	0,719,1113,1332,3384,13170,
#Partially deleted in new
chr16	3243140	3256587	chr16:3243140-3256587	0	-	3247235	3256587	789624	5	554,33,23,231,277,	0,719,3384,3875,13170,
#Partially deleted in new
chr16	3243140	3256587	chr16:3243140-3256587	0	-	3247235	3256587	789624	6	554,33,33,23,231,277,	0,719,1113,3384,3875,13170,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	3246409	3247967	chr16:3246409-3247967	0	-	3246409	3246409	8553170	2	138,952,	0,606,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	3263742	3267567	chr16:3263742-3267567	3	+	3263742	3263742	789624	2	2026,442,	0,3383,
#Partially deleted in new
chr16	3263799	3291029	chr16:3263799-3291029	1	+	3289562	3290558	789624	2	84,1637,	0,25593,
#Partially deleted in new
chr16	3263799	3267181	chr16:3263799-3267181	1	+	3263799	3263799	8553170	3	84,103,56,	0,1866,3326,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	3273608	3275807	chr16:3273608-3275807	3	+	3273608	3273608	8553170	1	2199,	0,
#Partially deleted in new
chr16	3282942	3291460	chr16:3282942-3291460	3	+	3283818	3290558	789624	6	1263,181,74,127,117,2068,	0,2116,2738,3080,5511,6450,
#Deleted in new
chr16	3283484	3286060	chr16:3283484-3286060	0	+	3283818	3286060	789624	2	721,38,	0,2538,
#Deleted in new
chr16	3283505	3286884	chr16:3283505-3286884	1	+	3283818	3285743	789624	3	700,74,862,	0,2175,2517,
#Partially deleted in new
chr16	3283509	3289835	chr16:3283509-3289835	1	+	3283818	3289686	789624	2	696,443,	0,5883,
#Partially deleted in new
chr16	3283954	3289875	chr16:3283954-3289875	0	+	3283954	3288549	789624	3	251,117,483,	0,4499,5438,
#Partially deleted in new
chr16	3290211	3301400	chr16:3290211-3301400	0	+	3290211	3299110	789624	2	342,2295,	0,8894,
#Partially deleted in new
chr16	3290402	3301401	chr16:3290402-3301401	0	+	3290402	3299110	789624	3	151,51,489,	0,8703,10510,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	3292878	3293403	chr16:3292878-3293403	3	+	3292878	3292878	8553170	1	525,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	3298831	3305645	chr16:3298831-3305645	3	-	3298964	3300614	789624	2	3178,434,	0,6380,
#Partially deleted in new
chr16	3300266	3305705	chr16:3300266-3305705	0	-	3300266	3300614	789624	2	361,194,	0,5245,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	3301322	3303872	chr16:3301322-3303872	0	-	3301322	3301322	8553170	2	687,114,	0,2436,
#Partially deleted in new
chr16	3301493	3305071	chr16:3301493-3305071	0	-	3301493	3301493	8553170	2	516,78,	0,3500,
#Partially deleted in new
chr16	3301646	3305729	chr16:3301646-3305729	0	-	3301646	3301646	8553170	2	363,218,	0,3865,
#Partially deleted in new
chr16	3301678	3305430	chr16:3301678-3305430	0	-	3301678	3301678	8553170	3	331,181,219,	0,3085,3533,
#Partially deleted in new
chr16	3301841	3305727	chr16:3301841-3305727	0	-	3301841	3301841	8553170	3	168,181,216,	0,2922,3670,
#Partially deleted in new
chr16	3301862	3305150	chr16:3301862-3305150	0	-	3301862	3301862	8553170	2	147,387,	0,2901,
#Partially deleted in new
chr16	3305405	3318574	chr16:3305405-3318574	0	+	3305405	3305405	5263520	6	238,524,196,92,111,1385,	0,2907,6347,7271,11506,11784,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	3305483	3309472	chr16:3305483-3309472	0	+	3305483	3305483	8553170	1	3989,	0,
#Partially deleted in new
chr16	3305485	3318852	chr16:3305485-3318852	3	+	3313075	3317869	789624	6	158,196,92,127,111,1663,	0,6267,7191,7563,11426,11704,
#Partially deleted in new
chr16	3305507	3317252	chr16:3305507-3317252	0	+	3305507	3305507	8553170	5	136,196,92,111,63,	0,6245,7169,11404,11682,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	3307572	3308393	chr16:3307572-3308393	3	-	3307572	3307572	8553170	1	821,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	3308331	3309449	chr16:3308331-3309449	1	+	3308428	3308890	789624	1	1118,	0,
#Deleted in new
chr16	3308608	3308816	chr16:3308608-3308816	7	+	3308608	3308608	16724991	1	208,	0,
#Partially deleted in new
chr16	3308737	3312365	chr16:3308737-3312365	0	+	3308737	3308737	8553170	2	99,613,	0,3015,
#Partially deleted in new
chr16	3310610	3311906	chr16:3310610-3311906	0	+	3310610	3310610	8553170	2	336,154,	0,1142,
#Partially deleted in new
chr16	3311619	3316924	chr16:3311619-3316924	0	+	3313075	3316924	789624	4	329,92,127,13,	0,1057,1429,5292,
#Partially deleted in new
chr16	3311789	3317925	chr16:3311789-3317925	1	+	3313075	3317869	789624	5	159,92,127,111,736,	0,887,1259,5122,5400,
#Deleted in new
chr16	3315990	3317446	chr16:3315990-3317446	0	+	3315990	3315990	8553170	2	1032,257,	0,1199,
#Deleted in new
chr16	3323191	3323925	chr16:3323191-3323925	7	-	3323191	3323191	16724991	1	734,	0,
#Deleted in new
chr16	3355888	3357294	chr16:3355888-3357294	3	+	3355940	3356879	789624	1	1406,	0,
#Partially deleted in new
chr16	3365098	3384706	chr16:3365098-3384706	0	+	3365098	3365098	8553170	2	84,697,	0,18911,
#Partially deleted in new
chr16	3365111	3479550	chr16:3365111-3479550	3	+	3404437	3476231	789624	5	71,223,70,116,80,	0,39314,83359,111110,114359,
#Deleted in new
chr16	3367718	3369246	chr16:3367718-3369246	7	-	3367718	3367718	16724991	1	1528,	0,
#Deleted in new
chr16	3369956	3370906	chr16:3369956-3370906	7	-	3369956	3369956	16724991	1	950,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	3370978	3372740	chr16:3370978-3372740	3	-	3371815	3371902	789624	1	1762,	0,
#Partially deleted in new
chr16	3382080	3401065	chr16:3382080-3401065	3	-	3382851	3397557	789624	7	1631,483,124,95,166,553,121,	0,2378,7929,8342,11568,15111,18864,
#Partially deleted in new
chr16	3382080	3401065	chr16:3382080-3401065	1	-	3382851	3384825	789624	4	1631,483,553,121,	0,2378,15111,18864,
#Partially deleted in new
chr16	3382084	3401025	chr16:3382084-3401025	1	-	3382851	3390124	789624	6	1627,483,174,95,596,52,	0,2374,7925,8338,15107,18889,
#Partially deleted in new
chr16	3382084	3401065	chr16:3382084-3401065	1	-	3382851	3397557	789624	7	1627,483,124,95,166,553,121,	0,2374,7925,8338,11564,15107,18860,
#Deleted in new
chr16	3382084	3384061	chr16:3382084-3384061	0	-	3382084	3382084	8553170	1	1977,	0,
#Partially deleted in new
chr16	3382112	3397745	chr16:3382112-3397745	3	+	3382908	3383244	789624	5	1599,483,179,90,554,	0,2346,7897,8315,15079,
#Partially deleted in new
chr16	3382357	3400995	chr16:3382357-3400995	0	-	3384746	3397557	789624	4	1354,483,553,51,	0,2101,14834,18587,
#Partially deleted in new
chr16	3382498	3400994	chr16:3382498-3400994	1	-	3382851	3384825	789624	3	1213,483,50,	0,1960,18446,
#Partially deleted in new
chr16	3383670	3400964	chr16:3383670-3400964	0	-	3383670	3397557	789624	7	41,483,124,95,166,553,20,	0,788,6339,6752,9978,13521,17274,
#Partially deleted in new
chr16	3383700	3397745	chr16:3383700-3397745	1	-	3384408	3397557	789624	5	1241,124,95,166,554,	0,6309,6722,9948,13491,
#Partially deleted in new
chr16	3384083	3401013	chr16:3384083-3401013	1	-	3384408	3390124	789624	4	858,174,166,69,	0,5926,9565,16861,
#Partially deleted in new
chr16	3384301	3397391	chr16:3384301-3397391	0	-	3384301	3384301	8553170	2	640,200,	0,12890,
#Partially deleted in new
chr16	3384318	3400989	chr16:3384318-3400989	1	-	3384408	3384825	789624	2	623,45,	0,16626,
#Partially deleted in new
chr16	3384497	3393814	chr16:3384497-3393814	0	-	3384497	3390124	789624	4	444,174,95,166,	0,5512,5925,9151,
#Partially deleted in new
chr16	3384820	3397745	chr16:3384820-3397745	0	-	3384820	3397557	789624	3	121,166,554,	0,8828,12371,
#Partially deleted in new
chr16	3384839	3400976	chr16:3384839-3400976	0	-	3384839	3397557	789624	5	102,124,95,553,32,	0,5170,5583,12352,16105,
#Partially deleted in new
chr16	3401234	3408973	chr16:3401234-3408973	1	+	3402004	3408919	0	4	36,674,223,653,	0,498,3191,7086,
#Partially deleted in new
chr16	3401234	3405043	chr16:3401234-3405043	1	+	3402004	3404988	0	4	36,674,223,135,	0,498,3191,3674,
#Partially deleted in new
chr16	3401243	3405079	chr16:3401243-3405079	1	+	3402004	3404988	0	3	1163,223,171,	0,3182,3665,
#Partially deleted in new
chr16	3401419	3409370	chr16:3401419-3409370	3	+	3402004	3408919	0	3	987,223,1050,	0,3006,6901,
#Partially deleted in new
chr16	3401973	3404994	chr16:3401973-3404994	1	+	3402004	3404773	789624	2	433,569,	0,2452,
#Partially deleted in new
chr16	3432421	3443553	chr16:3432421-3443553	3	-	3436423	3443153	789624	4	5117,127,86,194,	0,8385,10699,10938,
#Partially deleted in new
chr16	3443610	3486963	chr16:3443610-3486963	3	+	3476227	3484855	0	8	227,70,116,130,97,235,363,1497,	0,4860,32611,35860,38891,39752,41088,41856,
#Partially deleted in new
chr16	3443648	3483449	chr16:3443648-3483449	0	+	3476227	3483449	789624	7	179,139,70,116,130,97,87,	0,3833,4822,32573,35822,38853,39714,
#Partially deleted in new
chr16	3443667	3483414	chr16:3443667-3483414	0	+	3476227	3483414	789624	5	170,116,130,97,52,	0,32554,35803,38834,39695,
#Partially deleted in new
chr16	3443673	3448595	chr16:3443673-3448595	0	+	3443673	3443673	8553170	2	154,125,	0,4797,
#Partially deleted in new
chr16	3443676	3479601	chr16:3443676-3479601	0	+	3476227	3479601	789624	3	151,116,131,	0,32545,35794,
#Partially deleted in new
chr16	3443677	3483443	chr16:3443677-3483443	0	+	3443677	3443677	8553170	5	150,70,116,130,81,	0,4793,32544,35793,39685,
#Partially deleted in new
chr16	3443681	3485574	chr16:3443681-3485574	1	+	3443766	3484855	0	7	146,70,130,97,235,363,108,	0,4789,35789,38820,39681,41017,41785,
#Partially deleted in new
chr16	3443687	3482540	chr16:3443687-3482540	0	+	3476227	3482540	789624	6	206,139,70,116,130,39,	0,3794,4783,32534,35783,38814,
#Partially deleted in new
chr16	3443693	3486909	chr16:3443693-3486909	1	+	3476227	3484855	8553170	8	144,139,70,116,130,97,235,2211,	0,3788,4777,32528,35777,38808,39669,41005,
#Partially deleted in new
chr16	3443705	3485878	chr16:3443705-3485878	1	+	3476227	3484855	789624	7	122,70,116,130,97,235,1180,	0,4765,32516,35765,38796,39657,40993,
#Partially deleted in new
chr16	3443705	3484872	chr16:3443705-3484872	1	+	3479555	3484855	0	5	122,130,97,235,174,	0,35765,38796,39657,40993,
#Partially deleted in new
chr16	3443705	3482581	chr16:3443705-3482581	0	+	3476227	3482581	789624	5	188,70,116,130,80,	0,4765,32516,35765,38796,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	3443722	3449945	chr16:3443722-3449945	0	+	3443722	3443722	8553170	3	105,139,1475,	0,3759,4748,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	3443733	3450165	chr16:3443733-3450165	0	+	3443733	3443733	8553170	3	94,70,162,	0,4737,6270,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	3443745	3450145	chr16:3443745-3450145	0	+	3443745	3443745	8553170	3	92,70,166,	0,4725,6234,
#Partially deleted in new
chr16	3443753	3448596	chr16:3443753-3448596	0	+	3443753	3443753	8553170	2	140,126,	0,4717,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	3443787	3448967	chr16:3443787-3448967	0	+	3443787	3443787	8553170	2	40,497,	0,4683,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	3456730	3483385	chr16:3456730-3483385	0	+	3476227	3483385	789624	5	186,116,130,97,23,	0,19491,22740,25771,26632,
#Partially deleted in new
chr16	3457984	3485578	chr16:3457984-3485578	1	+	3476227	3484926	0	6	197,116,130,97,393,112,	0,18237,21486,24517,26706,27482,
#Partially deleted in new
chr16	3457992	3486952	chr16:3457992-3486952	1	+	3479555	3484855	0	6	189,130,97,235,385,1486,	0,21478,24509,25370,26706,27474,
#Partially deleted in new
chr16	3458011	3486952	chr16:3458011-3486952	1	+	3476227	3484855	0	7	170,116,130,97,235,385,1486,	0,18210,21459,24490,25351,26687,27455,
#Partially deleted in new
chr16	3458011	3485190	chr16:3458011-3485190	1	+	3479555	3484855	789624	5	170,130,97,235,492,	0,21459,24490,25351,26687,
#Partially deleted in new
chr16	3458044	3486914	chr16:3458044-3486914	1	+	3476227	3484855	0	6	137,116,130,97,235,2216,	0,18177,21426,24457,25318,26654,
#Partially deleted in new
chr16	3458050	3482911	chr16:3458050-3482911	0	+	3458050	3458050	8553170	5	131,116,130,97,87,	0,18171,21420,24451,24774,
#Partially deleted in new
chr16	3458070	3484909	chr16:3458070-3484909	0	+	3476227	3483386	789624	5	111,116,130,235,211,	0,18151,21400,25292,26628,
#Partially deleted in new
chr16	3458070	3515564	chr16:3458070-3515564	3	+	3458070	3458070	8553170	5	111,85,180,96,57,	0,48260,50218,54312,57437,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	3458075	3476299	chr16:3458075-3476299	0	+	3458075	3458075	8553170	3	106,569,78,	0,9601,18146,
#Partially deleted in new
chr16	3458075	3479591	chr16:3458075-3479591	0	+	3476227	3479591	789624	4	106,227,116,121,	0,14083,18146,21395,
#Partially deleted in new
chr16	3458076	3484753	chr16:3458076-3484753	0	+	3476227	3482517	789624	5	105,116,97,235,55,	0,18145,24425,25286,26622,
#Partially deleted in new
chr16	3458077	3484935	chr16:3458077-3484935	0	+	3458077	3458077	8553170	4	104,97,235,237,	0,24424,25285,26621,
#Partially deleted in new
chr16	3458077	3485786	chr16:3458077-3485786	1	+	3476227	3484964	0	6	104,116,130,97,322,320,	0,18144,21393,24424,26684,27389,
#Partially deleted in new
chr16	3458077	3483739	chr16:3458077-3483739	0	+	3458077	3458077	8553170	3	104,97,377,	0,24424,25285,
#Partially deleted in new
chr16	3458077	3486952	chr16:3458077-3486952	1	+	3476227	3484855	0	7	104,116,130,97,235,363,1486,	0,18144,21393,24424,25285,26621,27389,
#Partially deleted in new
chr16	3458077	3485907	chr16:3458077-3485907	1	+	3476227	3484855	789624	4	104,116,130,1217,	0,18144,21393,26613,
#Partially deleted in new
chr16	3458078	3483388	chr16:3458078-3483388	0	+	3476227	3483388	789624	6	103,86,116,130,97,26,	0,4519,18143,21392,24423,25284,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	3458104	3486841	chr16:3458104-3486841	0	+	3458104	3458104	8553170	5	77,116,130,97,3479,	0,18117,21366,24397,25258,
#Partially deleted in new
chr16	3458129	3485604	chr16:3458129-3485604	1	+	3476227	3484964	0	6	52,116,130,97,300,138,	0,18092,21341,24372,26632,27337,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	3479579	3483799	chr16:3479579-3483799	0	+	3479579	3479579	8553170	3	21,97,437,	0,2922,3783,
#Partially deleted in new
chr16	3483345	3485207	chr16:3483345-3485207	0	+	3483345	3483345	8553170	2	252,509,	0,1353,
#Deleted in new
chr16	3484576	3485559	chr16:3484576-3485559	0	+	3484576	3484576	8553170	2	485,93,	0,890,
#Deleted in new
chr16	3485380	3485469	chr16:3485380-3485469	3	-	3485380	3485380	5263520	1	89,	0,
#Partially deleted in new
chr16	3493483	3495480	chr16:3493483-3495480	0	-	3493838	3495480	789624	3	504,354,71,	0,1040,1926,
#Partially deleted in new
chr16	3493483	3495424	chr16:3493483-3495424	3	-	3493838	3495421	789624	3	504,354,49,	0,1040,1892,
#Deleted in new
chr16	3496200	3496768	chr16:3496200-3496768	7	+	3496200	3496200	16724991	1	568,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	3500923	3539048	chr16:3500923-3539048	3	+	3501067	3536271	789624	12	166,112,85,180,96,84,134,142,73,108,56,2927,	0,3796,5407,7365,11459,14584,18979,22234,25488,29644,31862,35198,
#Partially deleted in new
chr16	3500975	3515551	chr16:3500975-3515551	0	+	3501067	3508307	789624	5	114,112,180,96,44,	0,3744,7313,11407,14532,
#Partially deleted in new
chr16	3500980	3523229	chr16:3500980-3523229	0	+	3501067	3523229	789624	7	109,112,85,96,84,134,72,	0,3739,5350,11402,14527,18922,22177,
#Partially deleted in new
chr16	3500981	3523196	chr16:3500981-3523196	0	+	3501067	3508307	789624	7	108,85,180,96,84,134,39,	0,5349,7307,11401,14526,18921,22176,
#Partially deleted in new
chr16	3501006	3530609	chr16:3501006-3530609	0	+	3501067	3512383	789624	8	83,85,96,84,134,142,73,42,	0,5324,11376,14501,18896,22151,25405,29561,
#Partially deleted in new
chr16	3501011	3536559	chr16:3501011-3536559	1	+	3501067	3536271	789624	13	78,112,85,180,96,84,134,142,73,108,56,57,438,	0,3708,5319,7277,11371,14496,18891,22146,25400,29556,31774,32087,35110,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	3501017	3536825	chr16:3501017-3536825	1	+	3501067	3532913	789624	11	72,112,85,180,96,84,134,142,73,108,4040,	0,3702,5313,7271,11365,14490,18885,22140,25394,29550,31768,
#Partially deleted in new
chr16	3502043	3508464	chr16:3502043-3508464	0	+	3504730	3508464	789624	4	41,112,85,176,	0,2676,4287,6245,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	3509893	3537669	chr16:3509893-3537669	1	+	3515510	3536271	789624	8	76,84,134,142,73,108,56,1548,	0,5614,10009,13264,16518,20674,22892,26228,
#Partially deleted in new
chr16	3515375	3530590	chr16:3515375-3530590	0	+	3515510	3530590	789624	5	216,134,142,73,23,	0,4527,7782,11036,15192,
#Partially deleted in new
chr16	3519968	3536470	chr16:3519968-3536470	0	+	3519968	3523175	789624	5	68,142,108,56,349,	0,3189,10599,12817,16153,
#Partially deleted in new
chr16	3530461	3533111	chr16:3530461-3533111	0	+	3530461	3530461	8553170	2	214,326,	0,2324,
#Deleted in new
chr16	3533428	3534258	chr16:3533428-3534258	3	-	3533428	3533428	8553170	1	830,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr16	3539032	3577391	chr16:3539032-3577391	3	-	3541824	3565036	789624	20	2883,84,84,84,84,84,84,84,84,84,84,84,84,84,87,1750,202,62,82,243,	0,3158,3659,4392,5213,9102,9637,10109,10664,11381,13163,15209,17878,18560,22669,23976,25826,26286,28210,38116,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr16	3539037	3577400	chr16:3539037-3577400	0	-	3555813	3565036	789624	21	2878,84,84,84,84,84,84,84,84,84,84,84,136,84,84,87,1750,202,62,143,252,	0,3153,3654,4387,5208,9097,9632,10104,10659,11376,13158,15204,16743,17873,18555,22664,23971,25821,26281,28205,38111,
#Partially deleted in new
chr16	3541824	3577288	chr16:3541824-3577288	1	-	3541824	3577213	789624	18	91,84,84,84,84,84,84,84,84,84,84,84,84,84,87,1750,254,140,	0,366,867,1600,2421,6310,6845,7317,7872,8589,10371,12417,15086,15768,19877,21184,23034,35324,
#Duplicated in new
chr16	3542738	3545513	chr16:3542738-3545513	3	+	3542738	3542738	8553170	1	2775,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	3544430	3545785	chr16:3544430-3545785	1	+	3544430	3544430	8553170	2	300,180,	0,1175,
#Partially deleted in new
chr16	3548134	3556994	chr16:3548134-3556994	0	-	3548134	3556994	789624	7	84,84,84,84,84,84,84,	0,1007,1562,2279,4061,6107,8776,
#Partially deleted in new
chr16	3564069	3577373	chr16:3564069-3577373	0	-	3564069	3564069	8553170	5	716,73,62,82,225,	0,918,1249,3173,13079,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	3581180	3611598	chr16:3581180-3611598	3	-	3582341	3608964	0	15	1513,414,103,2309,167,147,89,241,317,203,213,190,225,1137,39,	0,1916,3588,7821,11518,13272,14424,14972,16198,16616,19798,20937,25293,27249,30379,
#Partially deleted in new
chr16	3581180	3583266	chr16:3581180-3583266	3	+	3581180	3581180	8553170	2	198,131,	0,1955,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	3595610	3609259	chr16:3595610-3609259	0	-	3595610	3595610	8553170	7	83,241,317,203,1329,225,830,	0,542,1768,2186,5368,10863,12819,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	3600620	3611585	chr16:3600620-3611585	0	-	3600620	3600620	8553170	4	1687,225,1137,26,	0,5853,7809,10939,
#Partially deleted in new
chr16	3611727	3658095	chr16:3611727-3658095	0	+	3655373	3655962	789624	12	279,523,145,605,84,148,118,84,116,343,97,190,	0,28987,31164,39589,43233,43645,44121,44374,44910,45271,45992,46178,
#Partially deleted in new
chr16	3642879	3657827	chr16:3642879-3657827	0	+	3655373	3656137	789624	8	157,84,148,84,116,113,155,108,	0,12081,12493,13222,13758,14119,14307,14840,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	3642937	3665472	chr16:3642937-3665472	3	+	3655373	3657953	0	10	99,84,148,89,84,116,113,155,97,7567,	0,12023,12435,12911,13164,13700,14061,14249,14782,14968,
#Partially deleted in new
chr16	3642937	3652114	chr16:3642937-3652114	0	+	3642937	3642937	8553170	2	99,798,	0,8379,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	3650635	3651703	chr16:3650635-3651703	3	-	3650635	3650635	8553170	1	1068,	0,
#Partially deleted in new
chr16	3651638	3661990	chr16:3651638-3661990	0	-	3658128	3661990	789624	4	530,178,73,4,	0,6414,7154,10348,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	3651836	3658095	chr16:3651836-3658095	1	+	3655373	3657953	0	9	3208,148,89,84,116,113,155,97,190,	0,3536,4012,4265,4801,5162,5350,5883,6069,
#Partially deleted in new
chr16	3654666	3663726	chr16:3654666-3663726	0	+	3655373	3656137	789624	8	378,148,84,116,155,97,159,240,	0,706,1435,1971,2520,3053,7979,8820,
#Deleted in new
chr16	3654825	3656056	chr16:3654825-3656056	0	+	3654825	3654825	8553170	3	219,148,208,	0,547,1023,
#Deleted in new
chr16	3654859	3657047	chr16:3654859-3657047	0	+	3655373	3656137	789624	5	185,148,84,116,49,	0,513,1242,1778,2139,
#Deleted in new
chr16	3656069	3657744	chr16:3656069-3657744	0	+	3656069	3656069	8553170	5	116,116,113,155,25,	0,568,929,1117,1650,
#Deleted in new
chr16	3656118	3658088	chr16:3656118-3658088	0	+	3656118	3657052	789624	6	67,116,148,155,97,183,	0,519,845,1068,1601,1787,
#Deleted in new
chr16	3656163	3657857	chr16:3656163-3657857	0	+	3656163	3657052	789624	5	22,116,148,117,138,	0,474,800,1061,1556,
#Deleted in new
chr16	3656710	3658095	chr16:3656710-3658095	0	+	3656710	3657805	789624	5	43,113,155,27,190,	0,288,476,1079,1195,
#Deleted in new
chr16	3657249	3658207	chr16:3657249-3658207	0	+	3657249	3657846	789624	2	92,488,	0,470,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	3657271	3680143	chr16:3657271-3680143	0	+	3657271	3657846	789624	3	70,148,395,	0,448,22477,
#Partially deleted in new
chr16	3658036	3717597	chr16:3658036-3717597	3	-	3658128	3717508	0	18	194,73,146,86,139,186,148,70,121,156,74,110,161,72,141,83,159,177,	0,756,3950,4845,5387,6237,7934,13685,14663,16302,17287,17999,19461,21682,27959,31018,32790,59384,
#Partially deleted in new
chr16	3658037	3717513	chr16:3658037-3717513	1	-	3658128	3717508	0	17	193,73,146,86,139,186,148,70,121,156,74,110,161,72,141,83,93,	0,755,3949,4844,5386,6236,7933,13684,14662,16301,17286,17998,19460,21681,27958,31017,59383,
#Partially deleted in new
chr16	3658037	3662267	chr16:3658037-3662267	0	-	3658037	3658037	8553170	3	193,73,281,	0,755,3949,
#Partially deleted in new
chr16	3658037	3678304	chr16:3658037-3678304	1	-	3658128	3677574	789624	13	193,73,146,86,139,186,148,70,121,156,74,110,807,	0,755,3949,4844,5386,6236,7933,13684,14662,16301,17286,17998,19460,
#Partially deleted in new
chr16	3666025	3677650	chr16:3666025-3677650	0	-	3666025	3666025	8553170	6	93,70,156,74,110,153,	0,5696,8313,9298,10010,11472,
#Partially deleted in new
chr16	3666081	3689075	chr16:3666081-3689075	0	-	3666081	3689075	789624	8	37,70,121,156,74,110,56,21,	0,5640,6618,8257,9242,9954,11416,22973,
#Partially deleted in new
chr16	3672801	3677570	chr16:3672801-3677570	0	-	3674528	3677570	789624	5	19,259,74,110,73,	0,1537,2522,3234,4696,
#Partially deleted in new
chr16	3674335	3676214	chr16:3674335-3676214	0	-	3674335	3674335	8553170	3	159,74,179,	0,988,1700,
#Partially deleted in new
chr16	3674655	3677658	chr16:3674655-3677658	0	-	3674655	3674655	8553170	4	250,74,110,161,	0,668,1380,2842,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	3676093	3676946	chr16:3676093-3676946	0	-	3676093	3676093	8553170	2	52,516,	0,337,
#Partially deleted in new
chr16	3677497	3717516	chr16:3677497-3717516	0	-	3710427	3717508	789624	7	161,72,141,83,159,69,96,	0,2221,8498,11557,13329,32887,39923,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	3678284	3717526	chr16:3678284-3717526	0	-	3678284	3678284	8553170	4	267,26,159,106,	0,10827,12542,39136,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	3678365	3717553	chr16:3678365-3717553	0	-	3678365	3678365	8553170	4	180,83,159,133,	0,10689,12461,39055,
#Partially deleted in new
chr16	3679734	3691133	chr16:3679734-3691133	0	-	3679734	3686046	789624	4	56,141,83,307,	0,6261,9320,11092,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	3686997	3687380	chr16:3686997-3687380	3	+	3686997	3686997	8553170	1	383,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	3689051	3717512	chr16:3689051-3717512	0	-	3710427	3717508	789624	5	86,159,115,69,92,	0,1775,15168,21333,28369,
#Partially deleted in new
chr16	3725053	3880726	chr16:3725053-3880726	3	-	3727717	3879916	0	31	4821,282,162,168,166,114,147,151,68,78,57,81,89,240,119,190,180,417,180,125,45,172,118,147,103,243,114,241,177,713,895,	0,6138,6722,10982,11596,13505,14524,15345,19840,20223,24573,26672,32234,32755,33800,42666,44120,45516,48697,49515,52559,52957,53646,55678,56150,57630,66927,68332,85549,125243,154778,
#Partially deleted in new
chr16	3727538	3880120	chr16:3727538-3880120	1	-	3727717	3879916	0	30	2336,282,162,168,166,114,147,151,68,78,57,81,89,240,119,190,180,417,180,125,45,172,118,147,103,243,241,177,713,289,	0,3653,4237,8497,9111,11020,12039,12860,17355,17738,22088,24187,29749,30270,31315,40181,41635,43031,46212,47030,50074,50472,51161,53193,53665,55145,65847,83064,122758,152293,
#Deleted in new
chr16	3730511	3731250	chr16:3730511-3731250	0	-	3730511	3731250	789624	2	41,59,	0,680,
#Partially deleted in new
chr16	3731907	3736999	chr16:3731907-3736999	0	-	3731907	3731907	8553170	3	30,168,350,	0,4128,4742,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	3731910	3743468	chr16:3731910-3743468	0	-	3731910	3731910	8553170	5	27,168,166,147,3070,	0,4125,4739,7667,8488,
#Partially deleted in new
chr16	3736082	3782861	chr16:3736082-3782861	0	-	3736082	3782861	789624	23	121,166,114,147,151,68,78,57,111,89,240,119,190,180,417,180,125,45,172,118,147,103,178,	0,567,2476,3495,4316,8811,9194,13544,15643,21205,21726,22771,31637,33091,34487,37668,38486,41530,41928,42617,44649,45121,46601,
#Partially deleted in new
chr16	3736507	3744957	chr16:3736507-3744957	0	-	3736507	3736507	8553170	3	308,151,64,	0,3891,8386,
#Partially deleted in new
chr16	3739445	3757291	chr16:3739445-3757291	0	-	3739573	3757291	789624	7	279,151,68,78,57,81,4,	0,953,5448,5831,10181,12280,17842,
#Partially deleted in new
chr16	3740442	3745654	chr16:3740442-3745654	0	-	3740442	3740442	8553170	3	107,68,378,	0,4451,4834,
#Partially deleted in new
chr16	3743662	3744923	chr16:3743662-3744923	0	-	3743662	3743662	8553170	2	70,30,	0,1231,
#Partially deleted in new
chr16	3745555	3749683	chr16:3745555-3749683	0	-	3745555	3745555	8553170	2	40,57,	0,4071,
#Partially deleted in new
chr16	3767301	3770703	chr16:3767301-3770703	0	-	3767301	3767301	8553170	3	608,180,134,	0,1872,3268,
#Partially deleted in new
chr16	3773635	3778172	chr16:3773635-3778172	0	-	3773717	3778172	789624	4	295,125,45,162,	0,933,3977,4375,
#Partially deleted in new
chr16	3773635	3780867	chr16:3773635-3780867	0	-	3773717	3780867	789624	5	295,125,172,118,136,	0,933,4375,5064,7096,
#Deleted in new
chr16	3773705	3774746	chr16:3773705-3774746	0	-	3773705	3773705	8553170	2	225,178,	0,863,
#Deleted in new
chr16	3777946	3778802	chr16:3777946-3778802	0	-	3777946	3777946	8553170	2	236,103,	0,753,
#Deleted in new
chr16	3782885	3784515	chr16:3782885-3784515	0	-	3782885	3782885	8553170	2	41,43,	0,1587,
#Partially deleted in new
chr16	3782889	3791255	chr16:3782889-3791255	0	-	3782889	3782889	8553170	2	37,63,	0,8303,
#Partially deleted in new
chr16	3810719	3812977	chr16:3810719-3812977	0	-	3810719	3810719	8553170	2	60,40,	0,2218,
#Partially deleted in new
chr16	3812997	3850321	chr16:3812997-3850321	0	-	3812997	3812997	8553170	2	75,25,	0,37299,
#Partially deleted in new
chr16	3840527	3841010	chr16:3840527-3841010	7	+	3840527	3840527	16724991	1	483,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	3931216	3946305	chr16:3931216-3946305	3	-	3931216	3931216	8553170	3	505,116,153,	0,12043,14936,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	3947608	3950444	chr16:3947608-3950444	1	-	3947608	3947608	789624	2	1221,173,	0,2663,
#Partially deleted in new
chr16	3953386	3989000	chr16:3953386-3989000	0	-	3953437	3989000	789624	6	130,42,149,160,209,7,	0,21282,24095,25729,29845,35607,
#Partially deleted in new
chr16	3962650	4116185	chr16:3962650-4116185	3	-	3965774	4115442	789624	11	4316,42,149,160,209,103,218,105,191,1736,496,	0,12018,14831,16465,20581,26343,29495,30755,44717,151099,153039,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	3981772	3984150	chr16:3981772-3984150	0	-	3981772	3981772	8553170	1	2378,	0,
#Partially deleted in new
chr16	3983391	4015682	chr16:3983391-4015682	0	-	3983391	3983391	8553170	5	49,103,105,191,121,	0,5602,10014,23976,32170,
#Partially deleted in new
chr16	3989083	4113925	chr16:3989083-4113925	0	-	3993469	4113925	789624	4	13,218,162,176,	0,3062,4265,124666,
#Partially deleted in new
chr16	3989088	4054190	chr16:3989088-4054190	0	-	3989088	3989088	8553170	5	8,125,105,191,156,	0,3057,4317,18279,64946,
#Partially deleted in new
chr16	3992221	4114026	chr16:3992221-4114026	0	-	3992221	4114026	789624	4	142,162,191,277,	0,1127,15146,121528,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	4032011	4032936	chr16:4032011-4032936	3	+	4032011	4032011	8553170	2	96,148,	0,777,
#Deleted in new
chr16	4130554	4130820	chr16:4130554-4130820	7	+	4130554	4130554	16724991	1	266,	0,
#Partially deleted in new
chr16	4180116	4183515	chr16:4180116-4183515	3	-	4180116	4180116	8553170	2	195,123,	0,3276,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	4189373	4242080	chr16:4189373-4242080	3	-	4192152	4242067	789624	6	3591,234,117,96,102,74,	0,6179,8425,13792,15159,52633,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	4189373	4242075	chr16:4189373-4242075	0	-	4204612	4242067	789624	7	3591,234,117,96,102,1378,69,	0,6179,8425,13792,15159,17353,52633,
#Partially deleted in new
chr16	4191809	4239743	chr16:4191809-4239743	1	-	4192152	4204569	789624	6	1155,234,117,96,102,110,	0,3743,5989,11356,12723,47824,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	4243942	4253789	chr16:4243942-4253789	3	-	4243942	4243942	8553170	3	3119,713,143,	0,7379,9704,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	4245900	4253817	chr16:4245900-4253817	1	-	4245900	4245900	789624	4	960,89,713,141,	0,1072,5421,7776,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	4246007	4251864	chr16:4246007-4251864	1	-	4246007	4246007	8553170	3	853,73,543,	0,981,5314,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	4246026	4252322	chr16:4246026-4252322	0	-	4246026	4246026	8553170	3	813,89,1001,	0,946,5295,
#Partially deleted in new
chr16	4246039	4252949	chr16:4246039-4252949	0	-	4246039	4246039	8553170	2	800,72,	0,6838,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	4246565	4253779	chr16:4246565-4253779	1	-	4246565	4246565	8553170	4	295,89,177,133,	0,407,1686,7081,
#Partially deleted in new
chr16	4246635	4253738	chr16:4246635-4253738	0	-	4246635	4246635	8553170	3	225,89,62,	0,337,7041,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	4251728	4253814	chr16:4251728-4253814	0	-	4251728	4251728	8553170	2	306,937,	0,1149,
#Partially deleted in new
chr16	4257185	4273075	chr16:4257185-4273075	3	-	4258054	4272746	789624	7	1064,156,141,171,99,166,418,	0,2904,3269,4593,5138,5350,15472,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	4257185	4258798	chr16:4257185-4258798	0	-	4257185	4257185	8553170	1	1613,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	4257186	4267187	chr16:4257186-4267187	0	-	4257186	4257186	8553170	5	1063,506,171,99,4652,	0,2903,4592,5137,5349,
#Partially deleted in new
chr16	4258188	4272894	chr16:4258188-4272894	0	-	4260549	4272746	789624	4	61,156,141,237,	0,1901,2266,14469,
#Partially deleted in new
chr16	4260454	4272831	chr16:4260454-4272831	0	-	4261833	4272746	789624	6	141,171,99,166,34,174,	0,1324,1869,2081,7593,12203,
#Partially deleted in new
chr16	4260497	4273075	chr16:4260497-4273075	0	-	4260497	4260497	8553170	4	98,644,166,418,	0,1281,2038,12160,
#Partially deleted in new
chr16	4261778	4263737	chr16:4261778-4263737	0	-	4261778	4262610	789624	4	171,99,166,71,	0,545,757,1888,
#Partially deleted in new
chr16	4314760	4339597	chr16:4314760-4339597	3	+	4332280	4337524	789624	8	695,60,238,173,177,134,119,2873,	0,14349,17454,18586,20040,20299,20514,21964,
#Duplicated in new
chr16	4324666	4328340	chr16:4324666-4328340	3	-	4324666	4324666	789624	4	109,85,65,81,	0,603,1763,3593,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	4331548	4351265	chr16:4331548-4351265	1	-	4331675	4351234	789624	5	226,66,137,85,34,	0,9371,9819,11658,19683,
#Partially deleted in new
chr16	4332223	4339597	chr16:4332223-4339597	1	+	4332280	4337524	789624	6	229,173,177,134,119,2873,	0,1123,2577,2836,3051,4501,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	4335869	4337818	chr16:4335869-4337818	3	-	4335869	4335869	8553170	1	1949,	0,
#Partially deleted in new
chr16	4340247	4351372	chr16:4340247-4351372	1	-	4340318	4351234	789624	5	158,66,137,85,141,	0,672,1120,2959,10984,
#Partially deleted in new
chr16	4340248	4343550	chr16:4340248-4343550	0	-	4340248	4340248	8553170	4	157,66,137,344,	0,671,1119,2958,
#Partially deleted in new
chr16	4340250	4345904	chr16:4340250-4345904	1	-	4340318	4343545	789624	6	155,66,137,85,112,119,	0,669,1117,2956,3232,5535,
#Partially deleted in new
chr16	4340250	4351315	chr16:4340250-4351315	0	-	4341485	4351234	789624	5	155,66,216,85,84,	0,669,1117,2956,10981,
#Partially deleted in new
chr16	4340250	4416587	chr16:4340250-4416587	3	-	4340318	4416518	789624	31	155,66,137,85,87,92,136,117,90,142,86,105,143,87,109,176,127,138,93,146,58,55,83,87,51,77,184,71,75,97,129,	0,669,1117,2956,15035,16917,17717,18116,19045,19229,20027,20193,20692,20911,21110,21734,22361,24025,24346,24524,24752,25240,47735,48294,55038,65240,67250,67930,72105,73057,76208,
#Partially deleted in new
chr16	4340250	4343624	chr16:4340250-4343624	0	-	4340250	4340250	8553170	4	155,66,216,142,	0,669,1117,3232,
#Partially deleted in new
chr16	4340250	4343761	chr16:4340250-4343761	1	-	4340318	4343545	789624	5	155,66,137,85,279,	0,669,1117,2956,3232,
#Partially deleted in new
chr16	4340250	4351270	chr16:4340250-4351270	0	-	4340250	4340250	8553170	5	155,66,305,85,39,	0,669,1117,2956,10981,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr16	4340250	4420494	chr16:4340250-4420494	0	-	4361773	4416518	789624	33	155,66,216,85,87,92,136,117,90,142,86,105,143,87,109,55,176,127,138,93,146,58,55,83,87,51,77,184,71,75,97,503,23,	0,669,1117,2956,15035,16917,17717,18116,19045,19229,20027,20193,20692,20911,21110,21498,21734,22361,24025,24346,24524,24752,25240,47735,48294,55038,65240,67250,67930,72105,73057,76208,80221,
#Partially deleted in new
chr16	4340250	4351055	chr16:4340250-4351055	0	-	4341485	4350947	789624	5	155,66,305,85,121,	0,669,1117,2956,10684,
#Partially deleted in new
chr16	4340250	4344133	chr16:4340250-4344133	1	-	4340318	4344097	789624	5	155,66,137,85,75,	0,669,1117,2956,3808,
#Partially deleted in new
chr16	4340317	4351293	chr16:4340317-4351293	0	-	4341387	4351293	789624	4	88,66,137,62,	0,602,1050,10914,
#Partially deleted in new
chr16	4340940	4359353	chr16:4340940-4359353	0	-	4340940	4340940	8553170	7	45,137,87,92,136,117,58,	0,427,14345,16227,17027,17426,18355,
#Partially deleted in new
chr16	4341651	4343693	chr16:4341651-4343693	0	-	4341651	4341651	8553170	3	21,85,211,	0,1555,1831,
#Deleted in new
chr16	4345289	4345978	chr16:4345289-4345978	0	-	4345289	4345289	8553170	2	282,193,	0,496,
#Partially deleted in new
chr16	4345289	4351320	chr16:4345289-4351320	0	-	4345289	4345289	8553170	2	717,89,	0,5942,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	4346693	4348648	chr16:4346693-4348648	3	-	4346693	4346693	8553170	1	1955,	0,
#Partially deleted in new
chr16	4354541	4416664	chr16:4354541-4416664	3	-	4355157	4416518	789624	28	622,87,92,136,117,90,142,86,105,143,87,109,176,127,138,93,146,58,55,83,87,51,77,184,71,75,97,206,	0,744,2626,3426,3825,4754,4938,5736,5902,6401,6620,6819,7443,8070,9734,10055,10233,10461,10949,33444,34003,40747,50949,52959,53639,57814,58766,61917,
#Partially deleted in new
chr16	4354543	4416627	chr16:4354543-4416627	0	-	4415771	4416518	789624	29	620,87,92,136,117,90,142,86,105,143,87,109,176,127,138,93,146,58,55,83,87,51,77,123,71,75,97,138,169,	0,742,2624,3424,3823,4752,4936,5734,5900,6399,6618,6817,7441,8068,9732,10053,10231,10459,10947,33442,34001,40745,50947,53018,53637,57812,58764,61171,61915,
#Partially deleted in new
chr16	4354600	4416629	chr16:4354600-4416629	1	-	4355157	4416518	789624	28	563,87,92,136,117,90,142,86,105,143,87,109,176,127,138,93,146,58,55,83,87,51,77,184,17,75,97,171,	0,685,2567,3367,3766,4695,4879,5677,5843,6342,6561,6760,7384,8011,9675,9996,10174,10402,10890,33385,33944,40688,50890,52900,53580,57755,58707,61858,
#Partially deleted in new
chr16	4354963	4416627	chr16:4354963-4416627	1	-	4355157	4416518	789624	26	200,87,92,136,117,90,142,86,105,143,87,109,176,127,138,93,146,58,55,83,87,51,77,75,97,169,	0,322,2204,3004,3403,4332,4516,5314,5480,5979,6198,6397,7021,7648,9312,9633,9811,10039,10527,33022,33581,40325,50527,57392,58344,61495,
#Partially deleted in new
chr16	4354967	4359627	chr16:4354967-4359627	0	-	4357256	4359627	789624	6	196,87,92,117,90,148,	0,318,2200,3399,4328,4512,
#Partially deleted in new
chr16	4355079	4358450	chr16:4355079-4358450	0	-	4355111	4358450	789624	4	293,92,136,84,	0,2088,2888,3287,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	4356431	4363228	chr16:4356431-4363228	0	-	4356431	4356431	8553170	12	828,136,117,90,142,86,105,143,87,109,176,617,	0,1536,1935,2864,3048,3846,4012,4511,4730,4929,5553,6180,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr16	4357374	4407577	chr16:4357374-4407577	0	-	4357374	4357374	8553170	20	1109,90,142,86,105,143,87,109,176,127,138,93,146,58,55,83,87,51,77,16,	0,1921,2105,2903,3069,3568,3787,3986,4610,5237,6901,7222,7400,7628,8116,30611,31170,37914,48116,50187,
#Partially deleted in new
chr16	4357763	4359328	chr16:4357763-4359328	0	-	4357763	4357763	8553170	3	340,117,33,	0,603,1532,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	4358441	4361902	chr16:4358441-4361902	0	-	4358441	4358441	8553170	8	42,90,142,86,105,143,87,542,	0,854,1038,1836,2002,2501,2720,2919,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	4358849	4359624	chr16:4358849-4359624	0	-	4358849	4358849	8553170	2	536,145,	0,630,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr16	4360277	4416596	chr16:4360277-4416596	0	-	4361773	4416518	789624	17	86,105,143,87,109,55,176,127,138,93,146,58,55,83,87,51,138,	0,166,665,884,1083,1471,1707,2334,3998,4319,4497,4725,5213,27708,28267,35011,56181,
#Partially deleted in new
chr16	4360444	4416626	chr16:4360444-4416626	0	-	4361405	4405555	789624	10	104,143,87,109,147,51,77,184,17,147,	0,498,717,916,1540,34844,45046,47056,47736,56035,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	4361649	4364571	chr16:4361649-4364571	0	-	4361649	4361649	8553170	3	511,127,296,	0,962,2626,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	4361689	4416596	chr16:4361689-4416596	0	-	4388049	4416518	789624	16	471,127,138,93,146,58,55,83,87,51,77,123,71,75,97,138,	0,922,2586,2907,3085,3313,3801,26296,26855,33599,43801,45872,46491,50666,51618,54769,
#Partially deleted in new
chr16	4364651	4416929	chr16:4364651-4416929	0	-	4364651	4416883	789624	8	38,146,58,55,83,87,51,145,	0,123,351,839,23334,23893,30637,52133,
#Partially deleted in new
chr16	4364829	4416596	chr16:4364829-4416596	0	-	4364829	4416518	789624	7	91,58,55,83,87,51,138,	0,173,661,23156,23715,30459,51629,
#Partially deleted in new
chr16	4371847	4383528	chr16:4371847-4383528	3	+	4380877	4382899	789624	2	146,2660,	0,9021,
#Partially deleted in new
chr16	4387764	4395340	chr16:4387764-4395340	0	-	4387764	4387764	8553170	3	304,87,52,	0,780,7524,
#Partially deleted in new
chr16	4388012	4416629	chr16:4388012-4416629	0	-	4388012	4416518	789624	7	56,78,33,71,75,97,171,	0,532,19639,20168,24343,25295,28446,
#Partially deleted in new
chr16	4388575	4416597	chr16:4388575-4416597	0	-	4388575	4405555	789624	6	56,51,77,184,71,139,	0,6713,16915,18925,19605,27883,
#Partially deleted in new
chr16	4388581	4416930	chr16:4388581-4416930	0	-	4388581	4416518	789624	9	50,51,77,123,71,75,97,142,146,	0,6707,16909,18980,19599,23774,24726,27877,28203,
#Partially deleted in new
chr16	4388606	4416626	chr16:4388606-4416626	0	-	4388606	4405555	789624	6	25,51,77,184,17,147,	0,6682,16884,18894,19574,27873,
#Partially deleted in new
chr16	4395322	4416929	chr16:4395322-4416929	0	-	4395322	4416883	789624	7	17,77,184,71,75,97,145,	0,10168,12178,12858,17033,17985,21462,
#Partially deleted in new
chr16	4405470	4416579	chr16:4405470-4416579	0	-	4408245	4416518	789624	5	97,184,71,75,121,	0,2030,2710,6885,10988,
#Partially deleted in new
chr16	4405509	4416627	chr16:4405509-4416627	0	-	4405509	4416518	789624	6	58,123,71,75,97,169,	0,2052,2671,6846,7798,10949,
#Partially deleted in new
chr16	4405522	4413489	chr16:4405522-4413489	0	-	4405522	4405555	789624	5	45,184,71,75,182,	0,1978,2658,6833,7785,
#Partially deleted in new
chr16	4405543	4414426	chr16:4405543-4414426	0	-	4405543	4405543	8553170	6	24,184,71,75,97,120,	0,1957,2637,6812,7764,8763,
#Partially deleted in new
chr16	4405544	4415933	chr16:4405544-4415933	0	-	4405544	4405544	8553170	6	23,184,71,75,97,168,	0,1956,2636,6811,7763,10221,
#Partially deleted in new
chr16	4407524	4415897	chr16:4407524-4415897	0	-	4407524	4407524	8553170	5	160,71,75,97,183,	0,656,4831,5783,8190,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	4408185	4412936	chr16:4408185-4412936	0	-	4408185	4408185	8553170	3	66,75,405,	0,4170,4346,
#Partially deleted in new
chr16	4416460	4425705	chr16:4416460-4425705	0	-	4416460	4416518	789624	2	501,228,	0,9017,
#Partially deleted in new
chr16	4416724	4425523	chr16:4416724-4425523	0	-	4416724	4416724	8553170	3	237,195,46,	0,3634,8753,
#Partially deleted in new
chr16	4425804	4456775	chr16:4425804-4456775	3	+	4425881	4454914	0	12	288,134,84,201,153,148,65,129,116,98,117,1230,	0,8579,11597,15570,16463,17212,18859,21081,22928,24595,29006,29741,
#Partially deleted in new
chr16	4425804	4456772	chr16:4425804-4456772	1	+	4425991	4455568	0	9	288,70,153,148,65,129,116,98,1227,	0,15701,16463,17212,18859,21081,22928,24595,29741,
#Partially deleted in new
chr16	4425859	4456775	chr16:4425859-4456775	1	+	4425881	4455568	0	11	233,134,84,201,153,148,65,129,116,98,1230,	0,8524,11542,15515,16408,17157,18804,21026,22873,24540,29686,
#Partially deleted in new
chr16	4425864	4442308	chr16:4425864-4442308	0	+	4425881	4437424	789624	4	228,84,201,41,	0,11537,15510,16403,
#Partially deleted in new
chr16	4425864	4455951	chr16:4425864-4455951	0	+	4425881	4442283	789624	9	228,70,153,148,65,129,116,98,406,	0,15641,16403,17152,18799,21021,22868,24535,29681,
#Partially deleted in new
chr16	4425878	4442393	chr16:4425878-4442393	0	+	4425881	4442393	789624	4	214,134,84,126,	0,8505,11523,16389,
#Partially deleted in new
chr16	4426047	4437625	chr16:4426047-4437625	0	+	4426047	4426047	8553170	3	45,134,224,	0,8336,11354,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	4426901	4427380	chr16:4426901-4427380	3	+	4426901	4426901	8553170	1	479,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	4430521	4431103	chr16:4430521-4431103	3	+	4430521	4430521	8553170	1	582,	0,
#Deleted in new
chr16	4433201	4433387	chr16:4433201-4433387	7	-	4433201	4433201	16724991	1	186,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	4433845	4441477	chr16:4433845-4441477	0	+	4433845	4433845	8553170	4	257,134,84,103,	0,538,3556,7529,
#Partially deleted in new
chr16	4434297	4441401	chr16:4434297-4441401	0	+	4434297	4434297	8553170	3	220,84,27,	0,3104,7077,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	4440256	4447955	chr16:4440256-4447955	0	+	4440256	4440256	8553170	4	1319,897,65,1070,	0,2011,4407,6629,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	4449553	4456772	chr16:4449553-4456772	0	+	4449553	4449553	8553170	3	944,117,1227,	0,5257,5992,
#Deleted in new
chr16	4455491	4456775	chr16:4455491-4456775	0	+	4455491	4455491	8553170	2	289,288,	0,996,
#Partially deleted in new
chr16	4461679	4474895	chr16:4461679-4474895	1	-	4461779	4474132	0	6	280,191,250,239,74,342,	0,1980,4473,7547,12413,12874,
#Partially deleted in new
chr16	4461690	4476306	chr16:4461690-4476306	3	-	4461779	4474132	0	6	269,191,250,239,700,70,	0,1969,4462,7536,12402,14546,
#Partially deleted in new
chr16	4461691	4466405	chr16:4461691-4466405	0	-	4463476	4466405	789624	4	268,93,191,253,	0,1728,1968,4461,
#Partially deleted in new
chr16	4461693	4474622	chr16:4461693-4474622	1	-	4461779	4474132	0	6	266,191,250,239,74,213,	0,1966,4459,7533,12399,12716,
#Partially deleted in new
chr16	4461693	4466336	chr16:4461693-4466336	0	-	4461779	4466336	789624	3	266,209,184,	0,1948,4459,
#Partially deleted in new
chr16	4461694	4474643	chr16:4461694-4474643	1	-	4461779	4474132	0	6	265,191,250,239,74,221,	0,1965,4458,7532,12398,12728,
#Partially deleted in new
chr16	4461698	4466174	chr16:4461698-4466174	0	-	4461779	4466174	789624	3	261,173,22,	0,1979,4454,
#Partially deleted in new
chr16	4461784	4464240	chr16:4461784-4464240	0	-	4461784	4461784	8553170	2	175,581,	0,1875,
#Partially deleted in new
chr16	4463567	4469365	chr16:4463567-4469365	0	-	4463567	4469365	789624	3	283,250,139,	0,2585,5659,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	4463742	4476297	chr16:4463742-4476297	0	-	4469612	4474132	789624	6	108,250,195,74,239,61,	0,2410,5761,10350,10811,12494,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	4463802	4469685	chr16:4463802-4469685	0	-	4463802	4463802	8553170	4	48,250,159,182,	0,2350,2724,5701,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	4466162	4474651	chr16:4466162-4474651	0	-	4471315	4474132	789624	5	240,239,136,74,98,	0,3064,5151,7930,8391,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	4467004	4474625	chr16:4467004-4474625	0	-	4467004	4467004	8553170	4	177,239,74,72,	0,2222,7088,7549,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	4469390	4474555	chr16:4469390-4474555	0	-	4469390	4469390	8553170	4	75,136,74,146,	0,1923,4702,5019,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	4469442	4474455	chr16:4469442-4474455	0	-	4469442	4469442	8553170	4	23,136,74,46,	0,1871,4650,4967,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	4469629	4474556	chr16:4469629-4474556	0	-	4469629	4469629	8553170	4	69,136,74,134,	0,1684,4463,4793,
#Partially deleted in new
chr16	4474683	4495763	chr16:4474683-4495763	0	-	4474683	4474683	8553170	4	109,98,116,249,	0,4780,7080,20831,
#Partially deleted in new
chr16	4474689	4509430	chr16:4474689-4509430	0	+	4505524	4509430	789624	5	158,127,118,492,19,	0,30794,32205,33023,34722,
#Partially deleted in new
chr16	4474702	4510346	chr16:4474702-4510346	3	+	4505524	4509756	0	6	145,127,118,492,127,718,	0,30781,32192,33010,34709,34926,
#Partially deleted in new
chr16	4475923	4510347	chr16:4475923-4510347	1	+	4505524	4509756	0	6	564,127,118,492,127,719,	0,29560,30971,31789,33488,33705,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	4476339	4510295	chr16:4476339-4510295	1	+	4505524	4509756	0	7	148,118,127,118,492,127,667,	0,7297,29144,30555,31373,33072,33289,
#Partially deleted in new
chr16	4476339	4510346	chr16:4476339-4510346	1	+	4505524	4509756	0	7	148,99,127,118,492,127,718,	0,12304,29144,30555,31373,33072,33289,
#Partially deleted in new
chr16	4476339	4510346	chr16:4476339-4510346	1	+	4505524	4509756	0	6	326,127,118,492,127,718,	0,29144,30555,31373,33072,33289,
#Partially deleted in new
chr16	4476378	4510346	chr16:4476378-4510346	1	+	4505524	4509756	0	6	39,127,118,492,127,718,	0,29105,30516,31334,33033,33250,
#Partially deleted in new
chr16	4476405	4509836	chr16:4476405-4509836	1	+	4506895	4509756	0	5	82,118,492,127,208,	0,30489,31307,33006,33223,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	4476411	4507838	chr16:4476411-4507838	0	+	4505524	4507838	789624	5	76,102,127,118,126,	0,7225,29072,30483,31301,
#Partially deleted in new
chr16	4476411	4507900	chr16:4476411-4507900	0	+	4505524	4507900	789624	4	254,127,118,188,	0,29072,30483,31301,
#Partially deleted in new
chr16	4476438	4507902	chr16:4476438-4507902	0	+	4505524	4507902	789624	5	49,99,127,118,190,	0,12205,29045,30456,31274,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	4476441	4496762	chr16:4476441-4496762	0	+	4476441	4476441	8553170	4	46,118,128,617,	0,7195,19458,19704,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	4476458	4508197	chr16:4476458-4508197	0	+	4505524	4508197	789624	5	29,118,127,118,485,	0,7178,29025,30436,31254,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	4495857	4509901	chr16:4495857-4509901	1	+	4505524	4509756	0	8	170,121,216,127,118,492,127,273,	0,288,6886,9626,11037,11855,13554,13771,
#Partially deleted in new
chr16	4495857	4510346	chr16:4495857-4510346	1	+	4505524	4509756	0	6	170,127,118,492,127,718,	0,9626,11037,11855,13554,13771,
#Partially deleted in new
chr16	4495857	4507904	chr16:4495857-4507904	0	+	4505524	4507904	789624	4	170,127,118,192,	0,9626,11037,11855,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	4496145	4510346	chr16:4496145-4510346	1	+	4496145	4509756	789624	6	121,127,118,492,127,718,	0,9338,10749,11567,13266,13483,
#Partially deleted in new
chr16	4508058	4509779	chr16:4508058-4509779	0	+	4508058	4509597	789624	2	146,368,	0,1353,
#Partially deleted in new
chr16	4510674	4538470	chr16:4510674-4538470	3	-	4512571	4514130	789624	6	2009,274,156,99,90,146,	0,2116,3021,3371,3900,27650,
#Deleted in new
chr16	4510738	4515109	chr16:4510738-4515109	1	-	4512571	4514130	789624	5	1945,274,156,99,535,	0,2052,2957,3307,3836,
#Partially deleted in new
chr16	4511323	4538784	chr16:4511323-4538784	1	-	4512571	4514130	789624	6	1360,274,156,99,90,83,	0,1467,2372,2722,3251,27378,
#Partially deleted in new
chr16	4511420	4538828	chr16:4511420-4538828	1	-	4512660	4513831	789624	4	1263,156,90,127,	0,2275,3154,27281,
#Partially deleted in new
chr16	4511805	4538784	chr16:4511805-4538784	1	-	4512571	4514130	789624	6	878,157,156,99,90,83,	0,985,1890,2240,2769,26896,
#Partially deleted in new
chr16	4511932	4538773	chr16:4511932-4538773	1	-	4512571	4514130	789624	6	751,157,36,99,90,72,	0,858,1883,2113,2642,26769,
#Deleted in new
chr16	4512398	4514664	chr16:4512398-4514664	0	-	4512866	4513831	789624	5	285,208,156,99,90,	0,392,1297,1647,2176,
#Partially deleted in new
chr16	4512453	4538775	chr16:4512453-4538775	0	-	4512453	4514130	789624	5	158,156,99,90,74,	0,1242,1592,2121,26248,
#Deleted in new
chr16	4512797	4514149	chr16:4512797-4514149	0	-	4512797	4514130	789624	3	216,156,104,	0,898,1248,
#Deleted in new
chr16	4512866	4514664	chr16:4512866-4514664	0	-	4512866	4513831	789624	3	198,156,90,	0,829,1708,
#Partially deleted in new
chr16	4512915	4538469	chr16:4512915-4538469	0	-	4512915	4513831	789624	4	149,156,34,145,	0,780,1715,25409,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	4513693	4538404	chr16:4513693-4538404	0	-	4513693	4514130	789624	5	158,99,90,329,80,	0,352,881,22746,24631,
#Partially deleted in new
chr16	4514044	4522525	chr16:4514044-4522525	0	-	4514044	4514130	789624	3	100,90,109,	0,530,8372,
#Partially deleted in new
chr16	4523826	4538773	chr16:4523826-4538773	0	-	4523826	4523826	8553170	2	476,72,	0,14875,
#Partially deleted in new
chr16	4532215	4533670	chr16:4532215-4533670	3	-	4532215	4532215	8553170	1	1455,	0,
#Partially deleted in new
chr16	4556489	4600714	chr16:4556489-4600714	3	+	4556489	4600317	789624	16	420,105,81,87,1462,86,111,75,165,119,63,93,160,100,81,615,	0,15071,18219,18482,18684,22450,23525,30549,31677,35176,35815,36734,37861,38214,42794,43610,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	4560000	4561662	chr16:4560000-4561662	3	-	4560000	4560000	8553170	1	1662,	0,
#Deleted in new
chr16	4562813	4563128	chr16:4562813-4563128	7	-	4562813	4562813	16724991	1	315,	0,
#Partially deleted in new
chr16	4608882	4614926	chr16:4608882-4614926	3	-	4609632	4614797	789624	3	1101,63,249,	0,1610,5795,
#Deleted in new
chr16	4608882	4611523	chr16:4608882-4611523	1	-	4609632	4610271	789624	1	2641,	0,
#Partially deleted in new
chr16	4608882	4614874	chr16:4608882-4614874	1	-	4609982	4614797	789624	3	1101,164,197,	0,1610,5795,
#Partially deleted in new
chr16	4608882	4614881	chr16:4608882-4614881	1	-	4609632	4614797	789624	2	1101,204,	0,5795,
#Partially deleted in new
chr16	4608882	4615027	chr16:4608882-4615027	1	-	4609632	4610495	789624	3	1101,63,111,	0,1610,6034,
#Partially deleted in new
chr16	4608883	4614876	chr16:4608883-4614876	0	-	4608883	4614797	789624	2	169,112,	0,5881,
#Partially deleted in new
chr16	4609367	4614872	chr16:4609367-4614872	1	-	4609632	4614797	789624	3	541,63,195,	0,1125,5310,
#Partially deleted in new
chr16	4609720	4614873	chr16:4609720-4614873	1	-	4609982	4614797	789624	3	263,63,381,	0,772,4772,
#Partially deleted in new
chr16	4609830	4614402	chr16:4609830-4614402	0	-	4609830	4610495	789624	3	153,63,443,	0,662,4129,
#Partially deleted in new
chr16	4616492	4657363	chr16:4616492-4657363	0	+	4650390	4657363	789624	5	83,119,89,147,118,	0,33872,35470,36185,40753,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr16	4624789	4690974	chr16:4624789-4690974	3	+	4624960	4688908	789624	17	259,119,89,147,118,67,50,48,69,160,110,66,227,124,46,90,2179,	0,25575,27173,27888,32456,39919,40312,43475,46601,48708,52673,55242,56760,58033,58434,59053,64006,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	4624823	4690974	chr16:4624823-4690974	1	+	4624960	4686299	789624	16	225,119,89,147,118,67,50,48,69,160,110,227,124,46,90,4716,	0,25541,27139,27854,32422,39885,40278,43441,46567,48674,52639,56726,57999,58400,59019,61435,
#Partially deleted in new
chr16	4624841	4688809	chr16:4624841-4688809	0	+	4624960	4681557	789624	15	207,119,89,147,118,67,50,48,69,160,227,124,46,90,14,	0,25523,27121,27836,32404,39867,40260,43423,46549,48656,56708,57981,58382,59001,63954,
#Partially deleted in new
chr16	4624845	4688843	chr16:4624845-4688843	0	+	4624960	4688843	789624	18	203,119,89,147,118,67,50,48,69,117,160,110,66,227,124,46,90,48,	0,25519,27117,27832,32400,39863,40256,43419,46545,47554,48652,52617,55186,56704,57977,58378,58997,63950,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr16	4624867	4690972	chr16:4624867-4690972	1	+	4624960	4686299	789624	17	181,119,89,147,118,67,50,48,69,160,110,66,227,124,46,90,4714,	0,25497,27095,27810,32378,39841,40234,43397,46523,48630,52595,55164,56682,57955,58356,58975,61391,
#Partially deleted in new
chr16	4624960	4689039	chr16:4624960-4689039	1	+	4624960	4686299	789624	17	88,119,89,147,118,67,50,48,69,160,110,227,124,46,90,45,244,	0,25404,27002,27717,32285,39748,40141,43304,46430,48537,52502,56589,57862,58263,58882,61298,63835,
#Partially deleted in new
chr16	4624960	4688908	chr16:4624960-4688908	1	+	4624960	4688908	789624	16	88,119,89,147,118,67,50,48,69,160,110,227,124,46,90,113,	0,25404,27002,27717,32285,39748,40141,43304,46430,48537,52502,56589,57862,58263,58882,63835,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	4633590	4633881	chr16:4633590-4633881	3	-	4633590	4633590	8553170	1	291,	0,
#Partially deleted in new
chr16	4634328	4640623	chr16:4634328-4640623	3	-	4634328	4634328	8553170	2	703,840,	0,5455,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	4649079	4651106	chr16:4649079-4651106	0	+	4649079	4649079	8553170	1	2027,	0,
#Partially deleted in new
chr16	4650386	4680067	chr16:4650386-4680067	0	+	4650386	4680067	789624	11	97,89,147,118,67,53,48,69,160,110,36,	0,1576,2291,6859,14322,14712,17878,21004,23111,27076,29645,
#Partially deleted in new
chr16	4650399	4673554	chr16:4650399-4673554	0	+	4650399	4673554	789624	6	84,89,147,66,55,57,	0,1563,2278,6846,21005,23098,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	4658850	4659151	chr16:4658850-4659151	3	+	4658850	4658850	8553170	1	301,	0,
#Partially deleted in new
chr16	4664068	4673622	chr16:4664068-4673622	0	+	4664068	4664068	8553170	6	218,67,50,48,69,125,	0,640,1033,4196,7322,9429,
#Partially deleted in new
chr16	4664415	4673522	chr16:4664415-4673522	0	+	4664415	4664415	8553170	5	360,50,48,69,25,	0,686,3849,6975,9082,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	4668296	4677326	chr16:4668296-4677326	0	+	4668296	4668296	8553170	4	16,69,160,406,	0,3094,5201,8624,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	4669120	4681580	chr16:4669120-4681580	0	+	4669120	4669120	8553170	6	132,69,160,110,66,31,	0,2270,4377,8342,10911,12429,
#Partially deleted in new
chr16	4671317	4671390	chr16:4671317-4671390	3	+	4671317	4671317	5263520	1	73,	0,
#Deleted in new
chr16	4680172	4683932	chr16:4680172-4683932	0	+	4680172	4680172	8553170	5	103,227,124,46,90,	0,1377,2650,3051,3670,
#Deleted in new
chr16	4680427	4682907	chr16:4680427-4682907	0	+	4680427	4680427	8553170	3	249,227,85,	0,1122,2395,
#Deleted in new
chr16	4681347	4683872	chr16:4681347-4683872	0	+	4681347	4681347	8553170	4	429,124,46,30,	0,1475,1876,2495,
#Deleted in new
chr16	4693693	4695859	chr16:4693693-4695859	3	+	4693726	4695179	0	3	186,261,902,	0,284,1264,
#Deleted in new
chr16	4693702	4695561	chr16:4693702-4695561	1	+	4693726	4695179	789624	3	177,261,484,	0,275,1375,
#Deleted in new
chr16	4693706	4695859	chr16:4693706-4695859	1	+	4693726	4695052	789624	3	173,331,902,	0,271,1251,
#Deleted in new
chr16	4693717	4695855	chr16:4693717-4695855	1	+	4693726	4694568	0	2	162,1878,	0,260,
#Deleted in new
chr16	4693760	4695292	chr16:4693760-4695292	0	+	4693760	4695179	789624	3	119,255,335,	0,223,1197,
#Partially deleted in new
chr16	4696509	4734377	chr16:4696509-4734377	1	-	4697027	4730149	789624	15	387,88,84,86,173,142,125,165,110,141,159,136,82,172,222,	0,507,823,1467,1917,2290,2542,4460,4924,5592,8585,17541,28240,33470,37646,
#Partially deleted in new
chr16	4696509	4730167	chr16:4696509-4730167	1	-	4697027	4730149	0	16	387,88,84,86,173,142,125,165,110,141,159,136,82,122,199,188,	0,507,823,1467,1917,2290,2542,4460,4924,5592,8585,17541,28240,30149,30469,33470,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr16	4696511	4734162	chr16:4696511-4734162	3	-	4697027	4730149	0	18	385,88,84,86,173,142,125,165,110,141,159,136,82,122,199,172,68,225,	0,505,821,1465,1915,2288,2540,4458,4922,5590,8583,17539,28238,30147,30467,33468,35000,37426,
#Partially deleted in new
chr16	4696511	4730246	chr16:4696511-4730246	1	-	4697027	4726762	789624	15	385,88,84,86,173,142,125,165,110,141,159,136,82,122,267,	0,505,821,1465,1915,2288,2540,4458,4922,5590,8583,17539,28238,30147,33468,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	4696511	4700303	chr16:4696511-4700303	0	-	4696511	4696511	8553170	7	385,88,84,86,173,142,1252,	0,505,821,1465,1915,2288,2540,
#Partially deleted in new
chr16	4696511	4734199	chr16:4696511-4734199	0	-	4724777	4730149	789624	16	385,88,84,86,173,142,125,165,110,141,159,136,82,199,172,44,	0,505,821,1465,1915,2288,2540,4458,4922,5590,8583,17539,28238,30467,33468,37644,
#Partially deleted in new
chr16	4696511	4727169	chr16:4696511-4727169	0	-	4696511	4696511	8553170	14	385,88,84,86,173,142,125,165,809,159,136,82,196,191,	0,505,821,1465,1915,2288,2540,4458,4922,8583,17539,28238,30147,30467,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	4696511	4700170	chr16:4696511-4700170	0	-	4696511	4696511	8553170	6	385,88,84,86,173,1371,	0,505,821,1465,1915,2288,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	4696511	4728078	chr16:4696511-4728078	0	-	4696511	4696511	8553170	15	385,88,84,86,173,142,125,165,110,141,159,136,82,122,1100,	0,505,821,1465,1915,2288,2540,4458,4922,5590,8583,17539,28238,30147,30467,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr16	4696511	4734219	chr16:4696511-4734219	0	-	4726764	4730149	789624	17	385,88,84,86,173,142,125,165,110,141,159,136,82,122,172,68,64,	0,505,821,1465,1915,2288,2540,4458,4922,5590,8583,17539,28238,30147,33468,35000,37644,
#Partially deleted in new
chr16	4696856	4734249	chr16:4696856-4734249	1	-	4697027	4727128	0	16	40,88,84,86,173,142,125,165,110,141,159,136,82,122,199,94,	0,160,476,1120,1570,1943,2195,4113,4577,5245,8238,17194,27893,29802,30122,37299,
#Partially deleted in new
chr16	4697352	4705230	chr16:4697352-4705230	0	-	4697352	4705230	789624	7	64,86,173,142,125,141,136,	0,624,1074,1447,1699,4749,7742,
#Deleted in new
chr16	4698142	4699195	chr16:4698142-4699195	0	-	4698142	4698142	8553170	2	457,396,	0,657,
#Partially deleted in new
chr16	4699504	4701620	chr16:4699504-4701620	0	-	4699504	4699504	8553170	3	203,165,187,	0,1465,1929,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	4699753	4734254	chr16:4699753-4734254	0	-	4714113	4730149	789624	7	1381,110,141,159,136,172,99,	0,1680,2348,5341,14297,30226,34402,
#Partially deleted in new
chr16	4700969	4734330	chr16:4700969-4734330	0	-	4700969	4724803	789624	7	165,110,141,159,136,82,175,	0,464,1132,4125,13081,23780,33186,
#Partially deleted in new
chr16	4700978	4734345	chr16:4700978-4734345	0	-	4700978	4730149	789624	8	156,110,141,159,136,82,172,190,	0,455,1123,4116,13072,23771,29001,33177,
#Partially deleted in new
chr16	4701050	4734192	chr16:4701050-4734192	0	-	4702139	4730149	789624	8	84,110,136,159,136,82,172,37,	0,383,1051,4044,13000,23699,28929,33105,
#Partially deleted in new
chr16	4701117	4734264	chr16:4701117-4734264	0	-	4701117	4714141	789624	6	17,110,141,159,136,109,	0,316,984,3977,12933,33038,
#Partially deleted in new
chr16	4702166	4734263	chr16:4702166-4734263	0	-	4702166	4714141	789624	8	76,159,136,82,196,199,172,108,	0,2928,11884,22583,24492,24812,27813,31989,
#Partially deleted in new
chr16	4705120	4734378	chr16:4705120-4734378	0	-	4726764	4730149	789624	6	133,136,82,122,172,223,	0,8930,19629,21538,24859,29035,
#Partially deleted in new
chr16	4705209	4725122	chr16:4705209-4725122	0	-	4705209	4705209	8553170	3	44,136,373,	0,8841,19540,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	4705242	4734247	chr16:4705242-4734247	0	-	4705242	4730149	789624	6	11,136,82,172,68,92,	0,8808,19507,24737,26269,28913,
#Partially deleted in new
chr16	4714015	4734192	chr16:4714015-4734192	0	-	4714015	4714015	8553170	4	281,82,172,37,	0,10734,15964,20140,
#Partially deleted in new
chr16	4724791	4734192	chr16:4724791-4734192	0	-	4726764	4730149	789624	5	40,118,199,172,37,	0,1867,2187,5188,9364,
#Partially deleted in new
chr16	4724824	4734160	chr16:4724824-4734160	0	-	4724824	4730149	789624	5	7,122,199,172,223,	0,1834,2154,5155,9113,
#Partially deleted in new
chr16	4726658	4734228	chr16:4726658-4734228	0	-	4726658	4730149	789624	4	122,199,172,73,	0,320,3321,7497,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	4729357	4734195	chr16:4729357-4734195	0	-	4729357	4729357	8553170	2	794,40,	0,4798,
#Partially deleted in new
chr16	4730114	4752565	chr16:4730114-4752565	3	-	4730114	4730114	8553170	5	37,317,86,72,44,	0,4840,7748,16030,22407,
#Partially deleted in new
chr16	4734271	4749396	chr16:4734271-4749396	3	+	4736514	4747625	789624	10	427,180,147,507,118,142,138,99,292,672,	0,2192,3528,5881,8771,10598,12103,12655,13071,14453,
#Partially deleted in new
chr16	4734343	4740345	chr16:4734343-4740345	0	+	4736514	4740345	789624	4	29,180,147,193,	0,2120,3456,5809,
#Partially deleted in new
chr16	4734479	4749395	chr16:4734479-4749395	1	+	4736514	4747625	789624	10	219,180,189,507,118,142,147,99,292,671,	0,1984,3320,5673,8563,10390,11895,12447,12863,14245,
#Partially deleted in new
chr16	4734501	4749396	chr16:4734501-4749396	0	+	4734501	4734501	8553170	8	197,180,147,507,118,142,1260,1154,	0,1962,3298,5651,8541,10368,11873,13741,
#Partially deleted in new
chr16	4740503	4743839	chr16:4740503-4743839	0	+	4740503	4743297	789624	2	156,797,	0,2539,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	4748238	4767218	chr16:4748238-4767218	3	-	4752375	4765978	789624	6	4820,97,65,184,512,202,	0,12253,14032,14334,17326,18778,
#Partially deleted in new
chr16	4748243	4752630	chr16:4748243-4752630	0	-	4748299	4752630	789624	2	167,109,	0,4278,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	4750791	4753188	chr16:4750791-4753188	0	-	4750791	4750791	8553170	1	2397,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	4750813	4767216	chr16:4750813-4767216	1	-	4751629	4765978	789624	7	845,537,97,65,184,512,200,	0,1708,9678,11457,11759,14751,16203,
#Partially deleted in new
chr16	4751970	4766004	chr16:4751970-4766004	0	-	4762698	4765978	789624	5	1088,97,65,141,440,	0,8521,10300,10602,13594,
#Partially deleted in new
chr16	4752726	4758575	chr16:4752726-4758575	0	-	4752726	4753002	789624	2	332,272,	0,5577,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	4756337	4756633	chr16:4756337-4756633	3	+	4756337	4756337	8553170	1	296,	0,
#Partially deleted in new
chr16	4765615	4766972	chr16:4765615-4766972	0	-	4765615	4765978	789624	2	461,46,	0,1311,
#Partially deleted in new
chr16	4777668	4788521	chr16:4777668-4788521	3	-	4777796	4787645	789624	10	330,52,97,96,118,138,82,126,188,242,	0,417,2021,5793,5980,6262,8138,8311,9811,10611,
#Partially deleted in new
chr16	4777668	4788346	chr16:4777668-4788346	1	-	4777796	4787645	789624	9	330,52,97,96,118,82,126,188,67,	0,417,2021,5793,5980,8138,8311,9811,10611,
#Partially deleted in new
chr16	4777668	4785836	chr16:4777668-4785836	0	-	4779761	4785836	789624	4	330,52,97,30,	0,417,2021,8138,
#Partially deleted in new
chr16	4777672	4788347	chr16:4777672-4788347	0	-	4783350	4787645	789624	10	326,52,97,241,118,138,82,126,188,68,	0,413,2017,5644,5976,6258,8134,8307,9807,10607,
#Partially deleted in new
chr16	4777938	4801423	chr16:4777938-4801423	3	-	4777938	4777938	8553170	12	60,52,97,82,126,405,127,50,114,99,96,926,	0,147,1751,7868,8041,13128,19775,19999,20132,20630,21747,22559,
#Partially deleted in new
chr16	4783930	4788352	chr16:4783930-4788352	0	-	4787471	4787645	789624	5	138,82,126,199,73,	0,1876,2049,3538,4349,
#Partially deleted in new
chr16	4784238	4788398	chr16:4784238-4788398	0	-	4784238	4784238	8553170	5	39,82,126,188,119,	0,1568,1741,3241,4041,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	4785708	4788348	chr16:4785708-4788348	0	-	4785708	4785708	8553170	4	180,126,188,69,	0,271,1771,2571,
#Partially deleted in new
chr16	4786077	4788254	chr16:4786077-4788254	0	-	4786077	4787645	789624	3	28,188,338,	0,1402,1839,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	4788396	4796281	chr16:4788396-4796281	1	+	4795734	4796231	789624	5	375,125,144,86,92,	0,6555,7318,7551,7793,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	4788396	4796231	chr16:4788396-4796231	1	+	4795734	4796231	789624	4	375,125,144,284,	0,6555,7318,7551,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	4788396	4796491	chr16:4788396-4796491	3	+	4795734	4796231	789624	5	375,125,144,101,302,	0,6555,7318,7551,7793,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	4788412	4795336	chr16:4788412-4795336	0	+	4788412	4788412	8553170	3	359,118,385,	0,1527,6539,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	4788455	4796281	chr16:4788455-4796281	1	+	4795734	4796231	789624	6	124,43,125,144,101,92,	0,273,6496,7259,7492,7734,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	4795264	4796532	chr16:4795264-4796532	3	-	4795264	4795264	8553170	2	524,196,	0,1072,
#Deleted in new
chr16	4795377	4796281	chr16:4795377-4796281	1	+	4795734	4796231	789624	4	72,144,86,92,	0,337,570,812,
#Deleted in new
chr16	4795420	4796281	chr16:4795420-4796281	1	+	4795734	4796231	789624	4	29,144,101,92,	0,294,527,769,
#Deleted in new
chr16	4795679	4796279	chr16:4795679-4796279	1	+	4795734	4796231	789624	3	179,86,90,	0,268,510,
#Deleted in new
chr16	4795702	4796316	chr16:4795702-4796316	1	+	4795734	4796231	789624	2	156,369,	0,245,
#Deleted in new
chr16	4795702	4796311	chr16:4795702-4796311	0	+	4795702	4795702	8553170	1	609,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	4795712	4796491	chr16:4795712-4796491	1	+	4795734	4796231	789624	3	146,101,302,	0,235,477,
#Deleted in new
chr16	4796967	4802950	chr16:4796967-4802950	3	-	4797459	4802571	0	11	534,127,50,114,99,96,81,55,83,72,424,	0,746,970,1103,1601,2718,3530,4299,4535,5414,5559,
#Deleted in new
chr16	4796968	4802633	chr16:4796968-4802633	0	-	4800571	4802571	789624	10	533,127,50,114,99,96,81,83,72,107,	0,745,969,1102,1600,2717,3529,4534,5413,5558,
#Deleted in new
chr16	4796968	4802162	chr16:4796968-4802162	0	-	4796968	4796968	8553170	7	533,127,50,114,99,96,1665,	0,745,969,1102,1600,2717,3529,
#Deleted in new
chr16	4796986	4802615	chr16:4796986-4802615	0	-	4797952	4802571	789624	11	515,127,50,114,121,87,81,55,83,72,89,	0,727,951,1084,1582,2708,3511,4280,4516,5395,5540,
#Deleted in new
chr16	4797246	4802673	chr16:4797246-4802673	0	-	4801161	4802571	789624	11	255,127,50,114,233,96,81,272,83,72,147,	0,467,691,824,1322,2439,3251,3803,4256,5135,5280,
#Deleted in new
chr16	4797308	4800552	chr16:4797308-4800552	0	-	4797459	4800552	789624	4	193,102,21,55,	0,405,2452,3189,
#Deleted in new
chr16	4797402	4801301	chr16:4797402-4801301	0	-	4797402	4801301	789624	7	99,127,114,99,96,81,35,	0,311,668,1166,2283,3095,3864,
#Deleted in new
chr16	4797702	4802621	chr16:4797702-4802621	0	-	4797702	4802571	789624	9	138,50,114,99,96,81,55,83,95,	0,235,368,866,1983,2795,3564,3800,4824,
#Deleted in new
chr16	4797706	4802627	chr16:4797706-4802627	0	-	4797706	4802571	789624	6	134,50,114,99,72,101,	0,231,364,862,4675,4820,
#Deleted in new
chr16	4797720	4800578	chr16:4797720-4800578	0	-	4797811	4800578	789624	5	116,50,114,96,81,	0,217,350,1965,2777,
#Deleted in new
chr16	4797741	4802184	chr16:4797741-4802184	0	-	4797741	4797741	8553170	8	99,50,114,99,96,81,83,271,	0,196,329,827,1944,2756,3761,4172,
#Deleted in new
chr16	4797779	4801659	chr16:4797779-4801659	0	-	4797779	4797779	8553170	8	61,50,114,99,96,81,55,157,	0,158,291,789,1906,2718,3487,3723,
#Deleted in new
chr16	4798503	4802630	chr16:4798503-4802630	0	-	4798503	4798503	8553170	6	164,96,81,55,83,249,	0,1182,1994,2763,2999,3878,
#Deleted in new
chr16	4801028	4802880	chr16:4801028-4802880	0	-	4801028	4801028	8553170	3	557,72,354,	0,1353,1498,
#Deleted in new
chr16	4801332	4802665	chr16:4801332-4802665	0	-	4801332	4801332	8553170	2	253,284,	0,1049,
#Deleted in new
chr16	4801815	4802856	chr16:4801815-4802856	0	-	4801815	4801815	8553170	2	638,330,	0,711,
#Partially deleted in new
chr16	4803202	4847342	chr16:4803202-4847342	3	-	4805235	4847265	789624	16	2108,125,180,163,102,111,100,74,51,57,87,243,139,80,37,115,	0,7967,8420,8883,10534,11334,14395,18177,18344,19672,20618,28776,29571,41871,42971,44025,
#Partially deleted in new
chr16	4803202	4847279	chr16:4803202-4847279	1	-	4805235	4847265	789624	15	2108,125,180,163,102,111,100,74,51,57,87,139,80,37,52,	0,7967,8420,8883,10534,11334,14395,18177,18344,19672,20618,29571,41871,42971,44025,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr16	4803202	4847271	chr16:4803202-4847271	0	-	4843598	4847265	789624	18	946,789,125,180,163,102,111,100,74,51,57,87,243,139,199,80,37,44,	0,1319,7967,8420,8883,10534,11334,14395,18177,18344,19672,20618,28776,29571,40201,41871,42971,44025,
#Partially deleted in new
chr16	4803202	4846210	chr16:4803202-4846210	0	-	4805235	4846210	789624	14	2108,125,180,163,102,111,100,74,57,87,243,139,80,37,	0,7967,8420,8883,10534,11334,14395,18177,19672,20618,28776,29571,41871,42971,
#Partially deleted in new
chr16	4803253	4814629	chr16:4803253-4814629	0	-	4813934	4814629	789624	4	312,273,219,93,	0,8722,10483,11283,
#Partially deleted in new
chr16	4805048	4847265	chr16:4805048-4847265	1	-	4805235	4847265	789624	16	262,125,180,163,102,93,100,74,51,57,87,243,139,80,37,38,	0,6121,6574,7037,8688,9488,12549,16331,16498,17826,18772,26930,27725,40025,41125,42179,
#Partially deleted in new
chr16	4814566	4817923	chr16:4814566-4817923	0	-	4814566	4814566	8553170	2	63,326,	0,3031,
#Partially deleted in new
chr16	4817652	4847288	chr16:4817652-4847288	0	-	4817652	4847265	789624	8	45,74,57,87,139,80,37,61,	0,3727,5222,6168,15121,27421,28521,29575,
#Partially deleted in new
chr16	4817663	4821664	chr16:4817663-4821664	0	-	4817663	4817663	8553170	2	34,285,	0,3716,
#Partially deleted in new
chr16	4821203	4832221	chr16:4821203-4832221	0	-	4821375	4832221	789624	5	250,51,57,87,243,	0,343,1671,2617,10775,
#Partially deleted in new
chr16	4822899	4833200	chr16:4822899-4833200	0	-	4822899	4822899	8553170	5	32,87,243,139,81,	0,921,9079,9874,10220,
#Partially deleted in new
chr16	4832454	4847282	chr16:4832454-4847282	0	-	4832454	4832454	8553170	4	458,80,37,55,	0,12619,13719,14773,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	4832864	4843912	chr16:4832864-4843912	0	-	4832864	4832864	8553170	2	48,509,	0,10539,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	4839243	4840334	chr16:4839243-4840334	3	-	4839243	4839243	8553170	1	1091,	0,
#Partially deleted in new
chr16	4846664	4859129	chr16:4846664-4859129	0	+	4852917	4859129	789624	5	1729,288,87,96,105,	0,6214,11325,11903,12360,
#Partially deleted in new
chr16	4847630	4882360	chr16:4847630-4882360	3	+	4852917	4880132	0	18	580,288,87,96,135,104,439,71,130,119,129,147,51,43,1224,241,90,2278,	0,5248,10359,10937,11394,12234,13033,21202,22581,22885,23213,23524,25253,25400,26580,29240,29754,32452,
#Partially deleted in new
chr16	4848379	4880294	chr16:4848379-4880294	1	+	4852917	4880132	0	17	14,288,87,96,135,104,439,71,130,119,129,147,51,43,1224,241,212,	0,4499,9610,10188,10645,11485,12284,20453,21832,22136,22464,22775,24504,24651,25831,28491,31703,
#Partially deleted in new
chr16	4852214	4882360	chr16:4852214-4882360	1	+	4852917	4880132	0	17	952,87,96,135,104,439,71,130,119,129,147,51,43,1224,241,90,2278,	0,5775,6353,6810,7650,8449,16618,17997,18301,18629,18940,20669,20816,21996,24656,25170,27868,
#Partially deleted in new
chr16	4858573	4868903	chr16:4858573-4868903	0	+	4858573	4859003	789624	5	90,282,104,290,71,	0,304,1291,2090,10259,
#Partially deleted in new
chr16	4860744	4870572	chr16:4860744-4870572	0	+	4860744	4860744	8553170	3	358,130,57,	0,9467,9771,
#Partially deleted in new
chr16	4870887	4874968	chr16:4870887-4874968	0	+	4870887	4874968	789624	4	85,51,43,758,	0,1996,2143,3323,
#Partially deleted in new
chr16	4875271	4880445	chr16:4875271-4880445	0	+	4875271	4877028	789624	4	163,89,90,363,	0,1751,2113,4811,
#Deleted in new
chr16	4876947	4877813	chr16:4876947-4877813	0	+	4876947	4876947	8553170	2	164,429,	0,437,
#Partially deleted in new
chr16	4882506	4937135	chr16:4882506-4937135	3	-	4883383	4937045	0	22	3541,93,117,84,151,194,139,179,158,98,152,147,123,96,108,162,42,126,121,155,100,152,	0,4628,5595,6471,7677,8221,9304,9528,10706,11034,11960,12754,13087,15168,16506,16716,18323,18457,19899,21379,28343,54477,
#Partially deleted in new
chr16	4882822	4937064	chr16:4882822-4937064	1	-	4883383	4937045	789624	22	3225,93,117,84,151,194,139,179,158,98,152,147,123,96,108,162,36,126,121,155,100,81,	0,4312,5279,6155,7361,7905,8988,9212,10390,10718,11644,12438,12771,14852,16190,16400,18007,18141,19583,21063,28027,54161,
#Partially deleted in new
chr16	4883571	4960741	chr16:4883571-4960741	0	-	4883571	4910858	789624	10	2476,93,117,84,151,173,88,155,100,178,	0,3563,4530,5406,6612,7156,18867,20314,27278,76992,
#Partially deleted in new
chr16	4888718	4890336	chr16:4888718-4890336	0	-	4888718	4888718	8553170	2	343,153,	0,1465,
#Deleted in new
chr16	4891442	4892179	chr16:4891442-4892179	0	-	4891442	4891442	8553170	2	507,145,	0,592,
#Deleted in new
chr16	4892754	4893821	chr16:4892754-4893821	0	-	4892754	4892754	8553170	2	616,281,	0,786,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	4958316	5019158	chr16:4958316-5019158	3	+	4959323	5014970	789624	16	129,114,150,132,129,193,113,190,89,71,172,135,135,228,179,4300,	0,956,29240,29832,32450,33521,38031,38538,42338,42538,45085,47597,49035,50104,52778,56542,
#Partially deleted in new
chr16	4959254	4991870	chr16:4959254-4991870	0	+	4959323	4991870	789624	5	132,150,132,129,33,	0,28302,28894,31512,32583,
#Partially deleted in new
chr16	5010908	5042250	chr16:5010908-5042250	0	+	5010908	5010908	8553170	2	365,156,	0,31186,
#Partially deleted in new
chr16	5024843	5033934	chr16:5024843-5033934	3	-	5025477	5033914	789624	10	842,64,102,48,206,129,109,140,456,106,	0,2291,2434,3002,3136,4036,5541,6901,8429,8985,
#Partially deleted in new
chr16	5024843	5033934	chr16:5024843-5033934	1	-	5025477	5033914	789624	9	842,64,48,206,129,109,140,456,106,	0,2291,3002,3136,4036,5541,6901,8429,8985,
#Partially deleted in new
chr16	5024871	5033918	chr16:5024871-5033918	0	-	5028388	5033914	789624	11	814,64,102,48,206,102,129,109,140,456,90,	0,2263,2406,2974,3108,3425,4008,5513,6873,8401,8957,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	5024871	5030158	chr16:5024871-5030158	0	-	5024871	5024871	8553170	4	814,245,48,2179,	0,2263,2974,3108,
#Partially deleted in new
chr16	5024900	5033922	chr16:5024900-5033922	0	-	5028388	5033914	8553170	11	701,64,102,48,206,102,129,109,140,456,94,	0,2234,2377,2945,3079,3396,3979,5484,6844,8372,8928,
#Partially deleted in new
chr16	5024909	5033926	chr16:5024909-5033926	0	-	5024909	5024909	8553170	7	640,64,102,48,206,129,654,	0,2225,2368,2936,3070,3970,8363,
#Partially deleted in new
chr16	5024929	5033632	chr16:5024929-5033632	0	-	5025477	5033632	789624	5	756,129,109,140,360,	0,3950,5455,6815,8343,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	5027277	5028403	chr16:5027277-5028403	0	-	5027277	5027277	8553170	3	102,48,424,	0,568,702,
#Partially deleted in new
chr16	5027289	5029118	chr16:5027289-5029118	0	-	5027289	5027289	8553170	4	90,48,206,239,	0,556,690,1590,
#Partially deleted in new
chr16	5027300	5033358	chr16:5027300-5033358	0	-	5028310	5033358	789624	8	79,48,206,69,129,109,140,86,	0,545,679,996,1579,3084,4444,5972,
#Partially deleted in new
chr16	5027315	5033338	chr16:5027315-5033338	0	-	5033100	5033338	789624	5	64,109,140,165,66,	0,3069,4429,5675,5957,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	5028071	5028614	chr16:5028071-5028614	0	-	5028071	5028071	8553170	1	543,	0,
#Partially deleted in new
chr16	5028119	5033636	chr16:5028119-5033636	0	-	5028119	5033636	789624	3	66,140,364,	0,3625,5153,
#Partially deleted in new
chr16	5028945	5033643	chr16:5028945-5033643	0	-	5031872	5033643	789624	4	63,109,140,303,	0,1439,2799,4395,
#Deleted in new
chr16	5030313	5030651	chr16:5030313-5030651	0	-	5030313	5030313	8553170	1	338,	0,
#Partially deleted in new
chr16	5030441	5033628	chr16:5030441-5033628	0	-	5030441	5030441	8553170	2	52,356,	0,2831,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	5031027	5033939	chr16:5031027-5033939	0	-	5031027	5031027	8553170	3	857,388,111,	0,2313,2801,
#Partially deleted in new
chr16	5031842	5034141	chr16:5031842-5034141	0	-	5031842	5031842	8553170	3	42,388,143,	0,1498,2156,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	5033701	5043999	chr16:5033701-5043999	3	+	5033701	5033701	789624	2	360,1905,	0,8393,
#Partially deleted in new
chr16	5033922	5085532	chr16:5033922-5085532	0	+	5033922	5033922	8553170	14	139,873,78,104,165,90,111,122,43,60,111,115,76,783,	0,8172,39028,39230,41449,43522,43984,44834,45141,45825,47023,48636,49759,50827,
#Partially deleted in new
chr16	5033959	5085390	chr16:5033959-5085390	1	+	5073199	5084881	789624	14	102,873,78,104,149,90,111,122,39,60,111,115,76,641,	0,8135,38991,39193,41428,43485,43947,44797,45104,45788,46986,48599,49722,50790,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	5044121	5066110	chr16:5044121-5066110	3	-	5044582	5065908	789624	8	715,87,105,136,118,151,150,410,	0,3756,11124,11931,14371,16164,18303,21579,
#Partially deleted in new
chr16	5044121	5066040	chr16:5044121-5066040	1	-	5044347	5065908	789624	8	357,87,105,136,118,151,150,340,	0,3756,11124,11931,14371,16164,18303,21579,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	5044121	5065971	chr16:5044121-5065971	1	-	5044582	5065908	789624	9	715,87,105,96,136,118,151,150,271,	0,3756,11124,11565,11931,14371,16164,18303,21579,
#Partially deleted in new
chr16	5044121	5055377	chr16:5044121-5055377	0	-	5044121	5044121	8553170	3	357,87,132,	0,3756,11124,
#Partially deleted in new
chr16	5047877	5058620	chr16:5047877-5058620	0	-	5047877	5047877	8553170	4	87,105,136,128,	0,7368,8175,10615,
#Partially deleted in new
chr16	5060223	5065919	chr16:5060223-5065919	0	-	5060223	5060223	8553170	3	213,150,219,	0,2201,5477,
#Partially deleted in new
chr16	5071818	5085587	chr16:5071818-5085587	3	+	5071849	5084881	789624	13	239,78,104,149,90,111,122,39,60,111,115,76,838,	0,1132,1334,3569,5626,6088,6938,7245,7929,9127,10740,11863,12931,
#Partially deleted in new
chr16	5071821	5077469	chr16:5071821-5077469	0	+	5071849	5077469	789624	5	236,78,104,139,25,	0,1129,1331,3576,5623,
#Deleted in new
chr16	5071842	5073428	chr16:5071842-5073428	0	+	5071842	5071842	8553170	3	215,78,276,	0,1108,1310,
#Partially deleted in new
chr16	5071848	5085018	chr16:5071848-5085018	0	+	5071849	5072104	789624	13	365,78,104,149,90,111,122,39,60,111,115,76,269,	0,1102,1304,3539,5596,6058,6908,7215,7899,9097,10710,11833,12901,
#Partially deleted in new
chr16	5072204	5078852	chr16:5072204-5078852	0	+	5073199	5078852	789624	7	114,78,104,149,90,111,96,	0,746,948,3183,5240,5702,6552,
#Partially deleted in new
chr16	5072247	5085057	chr16:5072247-5085057	1	+	5073199	5084881	789624	13	56,78,104,149,90,111,122,39,60,111,115,76,308,	0,703,905,3140,5197,5659,6509,6816,7500,8698,10311,11434,12502,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	5078167	5078605	chr16:5078167-5078605	7	-	5078167	5078167	16724991	1	438,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	5084303	5097808	chr16:5084303-5097808	3	-	5085631	5097739	789624	8	1429,150,266,134,102,81,63,165,	0,4803,5780,6128,7490,9180,11148,13340,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	5084303	5097788	chr16:5084303-5097788	1	-	5085631	5097739	789624	7	1429,150,266,134,81,63,145,	0,4803,5780,6128,9180,11148,13340,
#Partially deleted in new
chr16	5084717	5097754	chr16:5084717-5097754	0	-	5095388	5097739	789624	6	1015,150,134,102,140,111,	0,4389,5714,7076,10657,12926,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	5085070	5087379	chr16:5085070-5087379	0	+	5085070	5085070	8553170	2	594,879,	0,1430,
#Partially deleted in new
chr16	5085362	5097766	chr16:5085362-5097766	0	-	5095507	5097739	789624	8	370,150,266,134,102,63,74,123,	0,3744,4721,5069,6431,10089,11917,12281,
#Partially deleted in new
chr16	5085535	5089428	chr16:5085535-5089428	0	-	5085535	5085535	8553170	2	197,322,	0,3571,
#Partially deleted in new
chr16	5085571	5097742	chr16:5085571-5097742	1	-	5085631	5097739	789624	6	161,150,266,134,63,99,	0,3535,4512,4860,9880,12072,
#Partially deleted in new
chr16	5085614	5097774	chr16:5085614-5097774	0	-	5095388	5097739	789624	5	118,150,145,140,131,	0,3492,6179,9760,12029,
#Partially deleted in new
chr16	5089175	5097778	chr16:5089175-5097778	0	-	5089175	5089175	8553170	6	81,482,102,81,63,135,	0,908,2618,4308,6276,8468,
#Partially deleted in new
chr16	5090240	5097786	chr16:5090240-5097786	0	-	5090240	5090240	8553170	6	109,134,102,81,63,507,	0,191,1553,3243,5211,7039,
#Partially deleted in new
chr16	5098738	5142595	chr16:5098738-5142595	3	+	5098738	5098738	8553170	4	247,98,106,80,	0,31482,34535,43777,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	5107671	5235822	chr16:5107671-5235822	3	+	5107671	5107671	8553170	4	96,115,183,549,	0,97259,125723,127602,
#Partially deleted in new
chr16	5110792	5148685	chr16:5110792-5148685	7	-	5110792	5110792	16724991	3	638,150,252,	0,9881,37641,
#Deleted in new
chr16	5207087	5207439	chr16:5207087-5207439	7	+	5207087	5207087	16724991	1	352,	0,
#Partially deleted in new
chr16	5215393	5220594	chr16:5215393-5220594	3	-	5215393	5215393	8553170	3	51,131,90,	0,460,5111,
#Partially deleted in new
chr16	5239801	6776014	chr16:5239801-6776014	0	+	5239801	5239801	8553170	7	304,39,60,33,63,48,282,	0,227414,359100,627501,1077193,1414801,1535931,
#Partially deleted in new
chr16	5239801	7711458	chr16:5239801-7711458	1	+	5239886	7709641	789624	20	304,39,60,33,63,48,42,243,144,54,93,61,54,81,133,40,65,53,76,1965,	0,227414,359100,627501,1077193,1414801,1812255,2278345,2339975,2347445,2355747,2357569,2367483,2390801,2414013,2425127,2436972,2453513,2469254,2469692,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	5239814	5600151	chr16:5239814-5600151	1	+	5239886	5599249	789624	3	291,39,1250,	0,227401,359087,
#Partially deleted in new
chr16	5260685	5261043	chr16:5260685-5261043	7	-	5260685	5260685	16724991	1	358,	0,
#Partially deleted in new
chr16	5270173	5270954	chr16:5270173-5270954	7	+	5270173	5270173	16724991	1	781,	0,
#Deleted in new
chr16	5289199	5289409	chr16:5289199-5289409	7	-	5289199	5289199	16724991	1	210,	0,
#Deleted in new
chr16	5365796	5366688	chr16:5365796-5366688	7	+	5365796	5365796	16724991	1	892,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	5601168	5616196	chr16:5601168-5616196	3	-	5601168	5601168	789624	3	496,165,71,	0,10066,14957,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	5610299	5611293	chr16:5610299-5611293	1	-	5610299	5610299	8553170	2	375,59,	0,935,
#Deleted in new
chr16	5632466	5632566	chr16:5632466-5632566	3	+	5632466	5632466	5263520	1	100,	0,
#Deleted in new
chr16	5838130	5838661	chr16:5838130-5838661	7	-	5838130	5838130	16724991	1	531,	0,
#Partially deleted in new
chr16	6019093	7653846	chr16:6019093-7653846	0	+	7052071	7653846	789624	12	899,63,48,42,243,141,54,93,61,54,81,32,	0,297901,635509,1032963,1499053,1560686,1568153,1576455,1578277,1588191,1611509,1634721,
#Partially deleted in new
chr16	6019130	7713338	chr16:6019130-7713338	1	+	7052071	7710745	0	16	862,63,48,42,243,144,54,93,61,54,81,133,40,65,76,2716,	0,297864,635472,1032926,1499016,1560646,1568116,1576418,1578240,1588154,1611472,1634684,1645798,1657643,1689925,1691492,
#Partially deleted in new
chr16	6019130	7710840	chr16:6019130-7710840	1	+	7052071	7710745	0	15	862,63,48,42,243,144,54,93,61,54,133,40,65,76,218,	0,297864,635472,1032926,1499016,1560646,1568116,1576418,1578240,1588154,1634684,1645798,1657643,1689925,1691492,
#Partially deleted in new
chr16	6019592	7711458	chr16:6019592-7711458	1	+	6019898	7709641	789624	17	309,63,48,42,243,144,54,93,61,54,81,133,40,65,53,76,1965,	0,297402,635010,1032464,1498554,1560184,1567654,1575956,1577778,1587692,1611010,1634222,1645336,1657181,1673722,1689463,1689901,
#Partially deleted in new
chr16	6019702	7709781	chr16:6019702-7709781	1	+	6019898	7709571	789624	16	199,63,48,42,243,144,54,93,61,54,81,133,40,65,76,288,	0,297292,634900,1032354,1498444,1560074,1567544,1575846,1577668,1587582,1610900,1634112,1645226,1657071,1689353,1689791,
#Partially deleted in new
chr16	6019702	6723887	chr16:6019702-6723887	0	+	6019702	6019702	8553170	4	290,63,48,137,	0,297292,634900,704048,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	6037209	6038977	chr16:6037209-6038977	3	+	6037209	6037209	8553170	1	1768,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	6056974	6092954	chr16:6056974-6092954	3	+	6056974	6056974	8553170	4	130,48,64,534,	0,2231,33099,35446,
#Partially deleted in new
chr16	6483178	7709776	chr16:6483178-7709776	1	+	6483499	7709641	789624	14	366,48,42,243,54,61,54,81,133,40,65,53,76,283,	0,171424,568878,1034968,1104068,1114192,1124106,1147424,1170636,1181750,1193595,1210136,1225877,1226315,
#Partially deleted in new
chr16	6483323	7328793	chr16:6483323-7328793	2	+	6483323	6483323	8553170	5	221,48,100,42,146,	0,171279,500315,568733,845324,
#Partially deleted in new
chr16	6483385	7710763	chr16:6483385-7710763	1	+	6483499	7710623	789624	15	159,48,42,243,141,93,61,54,81,133,40,65,53,76,141,	0,171217,568671,1034761,1096394,1112163,1113985,1123899,1147217,1170429,1181543,1193388,1209929,1225670,1227237,
#Partially deleted in new
chr16	6483792	7653846	chr16:6483792-7653846	0	+	7052071	7653846	789624	11	122,48,42,243,144,54,93,61,54,81,32,	0,170810,568264,1034354,1095984,1103454,1111756,1113578,1123492,1146810,1170022,
#Partially deleted in new
chr16	6573766	6577359	chr16:6573766-6577359	3	+	6573766	6573766	8553170	2	124,448,	0,3145,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	6703882	6705558	chr16:6703882-6705558	3	+	6703882	6703882	8553170	1	1676,	0,
#Partially deleted in new
chr16	6721785	6721960	chr16:6721785-6721960	7	+	6721785	6721785	16724991	1	175,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	6748907	6748969	chr16:6748907-6748969	3	+	6748907	6748907	8553170	1	62,	0,
#Partially deleted in new
chr16	6773808	7710844	chr16:6773808-7710844	1	+	7052071	7710745	0	14	205,42,243,144,54,93,61,54,81,133,40,65,76,222,	0,278248,744338,805968,813438,821740,823562,833476,856794,880006,891120,902965,935247,936814,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	6873898	6874005	chr16:6873898-6874005	3	+	6873898	6873898	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	7004006	7004112	chr16:7004006-7004112	3	-	7004006	7004006	8553170	1	106,	0,
#Deleted in new
chr16	7126292	7126639	chr16:7126292-7126639	7	-	7126292	7126292	16724991	1	347,	0,
#Partially deleted in new
chr16	7332749	7712504	chr16:7332749-7712504	1	+	7333001	7710745	0	13	339,243,144,54,93,61,54,81,133,43,65,76,1882,	0,185397,247027,254497,262799,264621,274535,297853,321065,338807,344024,376306,377873,
#Partially deleted in new
chr16	7332749	7713338	chr16:7332749-7713338	1	+	7333046	7710745	789624	13	339,243,144,54,93,61,54,81,133,40,65,76,2716,	0,185397,247027,254497,262799,264621,274535,297853,321065,332179,344024,376306,377873,
#Partially deleted in new
chr16	7332749	7712504	chr16:7332749-7712504	1	+	7333001	7710623	0	14	339,243,144,54,93,61,54,81,133,43,65,53,76,1882,	0,185397,247027,254497,262799,264621,274535,297853,321065,338807,344024,360565,376306,377873,
#Partially deleted in new
chr16	7332749	7710844	chr16:7332749-7710844	1	+	7333001	7710745	0	13	339,243,144,54,93,61,54,81,133,43,65,76,144,	0,185397,247027,254497,262799,264621,274535,297853,321065,338807,344024,376306,377951,
#Partially deleted in new
chr16	7332749	7713338	chr16:7332749-7713338	1	+	7333046	7710745	789624	12	339,243,144,54,93,61,54,133,40,65,76,2716,	0,185397,247027,254497,262799,264621,274535,321065,332179,344024,376306,377873,
#Partially deleted in new
chr16	7422777	7579785	chr16:7422777-7579785	0	+	7422777	7422777	8553170	3	251,243,9,	0,95369,156999,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	7431216	7431296	chr16:7431216-7431296	3	+	7431216	7431216	8553170	1	80,	0,
#Partially deleted in new
chr16	7510121	7595641	chr16:7510121-7595641	0	+	7510279	7595641	789624	5	191,243,144,54,93,	0,8025,69655,77125,85427,
#Partially deleted in new
chr16	7597216	7630626	chr16:7597216-7630626	0	+	7597216	7597216	8553170	3	215,54,24,	0,10068,33386,
#Partially deleted in new
chr16	7614229	7614992	chr16:7614229-7614992	3	-	7614229	7614229	8553170	2	441,126,	0,637,
#Partially deleted in new
chr16	7653865	7710819	chr16:7653865-7710819	0	+	7653865	7710623	789624	4	82,65,76,197,	0,22908,55190,56757,
#Partially deleted in new
chr16	7664763	7710844	chr16:7664763-7710844	0	+	7664763	7664763	8553170	4	205,65,76,222,	0,12010,44292,45859,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	7726840	7726951	chr16:7726840-7726951	3	-	7726840	7726840	8553170	1	111,	0,
#Partially deleted in new
chr16	7888488	7894395	chr16:7888488-7894395	3	-	7888488	7888488	8553170	2	302,143,	0,5764,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	8276262	8295700	chr16:8276262-8295700	3	-	8276262	8276262	8553170	5	43,158,103,136,160,	0,729,2822,13172,19278,
#Deleted in new
chr16	8298491	8299772	chr16:8298491-8299772	3	+	8298491	8298491	8553170	1	1281,	0,
#Partially deleted in new
chr16	8309961	8357860	chr16:8309961-8357860	3	+	8309961	8309961	8553170	4	99,124,140,118,	0,3668,39148,47781,
#Partially deleted in new
chr16	8369863	8376276	chr16:8369863-8376276	3	+	8369863	8369863	8553170	3	125,62,218,	0,1440,6195,
#Deleted in new
chr16	8508068	8508585	chr16:8508068-8508585	7	+	8508068	8508068	16724991	2	147,309,	0,208,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	8526548	8532013	chr16:8526548-8532013	3	-	8526548	8526548	8553170	2	130,84,	0,5381,
#Partially deleted in new
chr16	8537604	8589749	chr16:8537604-8589749	0	-	8537604	8537604	8553170	3	222,81,131,	0,51608,52014,
#Partially deleted in new
chr16	8569499	8590193	chr16:8569499-8590193	1	-	8569772	8589270	789624	4	506,138,81,174,	0,2587,19713,20520,
#Partially deleted in new
chr16	8569499	8589838	chr16:8569499-8589838	3	-	8569772	8589838	789624	4	506,138,81,220,	0,2587,19713,20119,
#Partially deleted in new
chr16	8569705	8572302	chr16:8569705-8572302	0	-	8569705	8569705	8553170	2	300,216,	0,2381,
#Partially deleted in new
chr16	8569746	8589838	chr16:8569746-8589838	1	-	8569772	8589838	789624	3	259,81,220,	0,19466,19872,
#Partially deleted in new
chr16	8621682	8628808	chr16:8621682-8628808	0	+	8625665	8628808	789624	4	93,139,303,79,	0,2074,3813,7047,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	8621687	8649654	chr16:8621687-8649654	3	+	8625665	8646143	789624	11	88,303,381,41,145,72,54,81,103,169,3547,	0,3808,7042,13351,13480,17403,19443,20439,20775,22869,24420,
#Partially deleted in new
chr16	8621690	8646224	chr16:8621690-8646224	0	+	8625665	8635271	789624	10	85,303,381,145,72,54,81,103,169,117,	0,3805,7039,13477,17400,19440,20436,20772,22866,24417,
#Partially deleted in new
chr16	8621709	8625713	chr16:8621709-8625713	0	+	8625665	8625713	789624	3	66,266,218,	0,2143,3786,
#Partially deleted in new
chr16	8621728	8646191	chr16:8621728-8646191	1	+	8625665	8646143	789624	12	47,303,147,66,41,145,72,54,81,103,169,84,	0,3767,7001,7316,13310,13439,17362,19402,20398,20734,22828,24379,
#Partially deleted in new
chr16	8621731	8635282	chr16:8621731-8635282	0	+	8625665	8628910	789624	5	44,303,211,41,115,	0,3764,7168,13307,13436,
#Partially deleted in new
chr16	8623601	8625575	chr16:8623601-8625575	0	+	8623601	8623601	8553170	2	517,80,	0,1894,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	8631246	8646222	chr16:8631246-8646222	0	+	8631246	8631246	8553170	9	892,41,145,72,54,81,103,169,115,	0,3792,3921,7844,9884,10880,11216,13310,14861,
#Partially deleted in new
chr16	8635167	8639205	chr16:8635167-8639205	0	+	8635167	8635167	8553170	2	145,115,	0,3923,
#Partially deleted in new
chr16	8635224	8646218	chr16:8635224-8646218	0	+	8635224	8644595	789624	7	88,72,54,81,103,197,111,	0,3866,5906,6902,7238,9304,10883,
#Deleted in new
chr16	8639106	8642927	chr16:8639106-8642927	0	+	8639106	8639106	8553170	4	56,54,81,465,	0,2024,3020,3356,
#Deleted in new
chr16	8639233	8642148	chr16:8639233-8642148	0	+	8639233	8639233	8553170	3	443,54,22,	0,1897,2893,
#Partially deleted in new
chr16	8641130	8646218	chr16:8641130-8646218	0	+	8641130	8642169	789624	6	54,43,81,103,169,111,	0,272,996,1332,3426,4977,
#Partially deleted in new
chr16	8641137	8646027	chr16:8641137-8646027	0	+	8641137	8646003	789624	5	47,81,103,169,120,	0,989,1325,3419,4770,
#Partially deleted in new
chr16	8641622	8644653	chr16:8641622-8644653	0	+	8641622	8641622	8553170	4	157,81,103,97,	0,504,840,2934,
#Deleted in new
chr16	8641877	8642539	chr16:8641877-8642539	0	+	8641877	8641877	8553170	2	330,77,	0,585,
#Partially deleted in new
chr16	8642467	8645044	chr16:8642467-8645044	0	+	8642467	8644770	789624	2	98,488,	0,2089,
#Partially deleted in new
chr16	8644436	8646222	chr16:8644436-8646222	0	+	8644436	8644436	8553170	2	289,115,	0,1671,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	8666761	8667271	chr16:8666761-8667271	3	+	8666761	8666761	8553170	1	510,	0,
#Partially deleted in new
chr16	8674564	8784575	chr16:8674564-8784575	3	+	8735739	8781430	789624	16	147,111,98,30,118,50,81,93,63,64,149,138,168,147,112,3267,	0,61134,71436,73543,75857,83192,89504,90173,91643,93628,94260,98215,100325,101779,104914,106744,
#Partially deleted in new
chr16	8674595	8750456	chr16:8674595-8750456	0	+	8722829	8750456	789624	6	116,76,111,98,30,35,	0,48171,61103,71405,73512,75826,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	8674616	8737473	chr16:8674616-8737473	0	+	8674616	8674616	8553170	2	95,1775,	0,61082,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	8683253	8683551	chr16:8683253-8683551	3	+	8683253	8683253	8553170	1	298,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	8705455	8705517	chr16:8705455-8705517	3	-	8705455	8705455	8553170	1	62,	0,
#Partially deleted in new
chr16	8712836	8746025	chr16:8712836-8746025	0	+	8735739	8746025	789624	4	69,375,111,25,	0,654,22862,33164,
#Partially deleted in new
chr16	8712954	8748135	chr16:8712954-8748135	0	+	8735739	8748135	789624	5	108,247,111,98,28,	0,664,22744,33046,35153,
#Partially deleted in new
chr16	8712967	8713865	chr16:8712967-8713865	0	+	8712967	8712967	8553170	2	95,375,	0,523,
#Partially deleted in new
chr16	8712968	8784575	chr16:8712968-8784575	1	+	8735739	8781430	789624	16	897,111,98,30,118,50,81,93,63,64,149,138,168,147,112,3267,	0,22730,33032,35139,37453,44788,51100,51769,53239,55224,55856,59811,61921,63375,66510,68340,
#Partially deleted in new
chr16	8712989	8781531	chr16:8712989-8781531	0	+	8735739	8750483	789624	15	876,111,30,118,50,81,93,63,64,149,138,168,147,112,223,	0,22709,35118,37432,44767,51079,51748,53218,55203,55835,59790,61900,63354,66489,68319,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	8713361	8715633	chr16:8713361-8715633	0	+	8713361	8713361	8553170	2	504,1044,	0,1228,
#Partially deleted in new
chr16	8713600	8750485	chr16:8713600-8750485	0	+	8735739	8750485	789624	6	265,111,12,98,30,64,	0,22098,24842,32400,34507,36821,
#Partially deleted in new
chr16	8713613	8781579	chr16:8713613-8781579	1	+	8713875	8781430	789624	16	266,111,98,30,118,50,81,93,63,64,149,138,168,147,112,271,	0,22085,32387,34494,36808,44143,50455,51124,52594,54579,55211,59166,61276,62730,65865,67695,
#Partially deleted in new
chr16	8720715	8781590	chr16:8720715-8781590	1	+	8735739	8781430	789624	16	219,111,98,30,118,50,81,93,63,64,149,138,168,147,112,282,	0,14983,25285,27392,29706,37041,43353,44022,45492,47477,48109,52064,54174,55628,58763,60593,
#Partially deleted in new
chr16	8720718	8781522	chr16:8720718-8781522	1	+	8735739	8781416	789624	16	216,111,98,30,118,50,81,93,63,64,149,138,168,147,112,273,	0,14980,25282,27389,29703,37038,43350,44019,45489,47474,48106,52061,54171,55625,58760,60531,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	8720821	8757804	chr16:8720821-8757804	0	+	8735739	8757232	789624	7	113,111,98,30,118,116,48,	0,14877,25179,27286,29600,36373,36935,
#Deleted in new
chr16	8731415	8731559	chr16:8731415-8731559	7	-	8731415	8731415	16724991	1	144,	0,
#Partially deleted in new
chr16	8746001	8760429	chr16:8746001-8760429	0	+	8746001	8746001	8553170	5	97,30,118,50,301,	0,2106,4420,11755,14127,
#Partially deleted in new
chr16	8765784	8768846	chr16:8765784-8768846	0	+	8765784	8765784	8553170	3	486,64,22,	0,2408,3040,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	8780383	8797642	chr16:8780383-8797642	0	-	8780383	8780383	8553170	3	378,152,31,	0,909,17228,
#Partially deleted in new
chr16	8788822	8847868	chr16:8788822-8847868	1	+	8801813	8847825	789624	8	189,112,77,92,100,76,116,145,	0,12976,15944,17493,22256,22815,24168,58901,
#Partially deleted in new
chr16	8788839	8795662	chr16:8788839-8795662	0	+	8788839	8788839	8553170	2	172,453,	0,6370,
#Deleted in new
chr16	8795179	8797648	chr16:8795179-8797648	3	-	8795951	8797614	789624	2	1411,37,	0,2432,
#Partially deleted in new
chr16	8797816	8849331	chr16:8797816-8849331	3	+	8797882	8847825	0	8	132,112,77,92,100,76,116,1608,	0,3982,6950,8499,13262,13821,15174,49907,
#Partially deleted in new
chr16	8797820	8807034	chr16:8797820-8807034	0	+	8797820	8797820	8553170	4	128,112,77,719,	0,3978,6946,8495,
#Partially deleted in new
chr16	8797836	8848124	chr16:8797836-8848124	0	+	8797882	8811650	0	7	112,112,77,92,76,116,401,	0,3962,6930,8479,13801,15154,49887,
#Partially deleted in new
chr16	8797838	8802389	chr16:8797838-8802389	0	+	8797838	8797838	8553170	3	110,112,309,	0,3960,4242,
#Partially deleted in new
chr16	8797841	8848051	chr16:8797841-8848051	0	+	8797882	8806338	789624	7	107,112,92,100,76,116,328,	0,3957,8474,13237,13796,15149,49882,
#Partially deleted in new
chr16	8797841	8806679	chr16:8797841-8806679	0	+	8797841	8797841	8553170	3	107,112,364,	0,3957,8474,
#Partially deleted in new
chr16	8797841	8811667	chr16:8797841-8811667	0	+	8797882	8802100	789624	6	107,112,65,100,100,30,	0,3957,4239,4448,13237,13796,
#Partially deleted in new
chr16	8797841	8848777	chr16:8797841-8848777	0	+	8797882	8806338	789624	6	107,112,92,76,116,1054,	0,3957,8474,13796,15149,49882,
#Partially deleted in new
chr16	8797841	8811111	chr16:8797841-8811111	0	+	8797882	8802358	789624	6	107,112,129,77,92,33,	0,3957,4419,6925,8474,13237,
#Partially deleted in new
chr16	8797849	8848322	chr16:8797849-8848322	0	+	8797882	8813009	789624	5	99,112,76,116,599,	0,3949,13788,15141,49874,
#Partially deleted in new
chr16	8797866	8848030	chr16:8797866-8848030	0	+	8797882	8811113	789624	6	82,112,100,76,116,307,	0,3932,13212,13771,15124,49857,
#Partially deleted in new
chr16	8797866	8848039	chr16:8797866-8848039	1	+	8797882	8847825	789624	5	82,112,72,116,316,	0,3932,13775,15124,49857,
#Partially deleted in new
chr16	8797911	8813067	chr16:8797911-8813067	0	+	8797911	8811650	789624	7	37,112,77,92,100,72,77,	0,3887,6855,8404,13167,13730,15079,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	8807563	8849325	chr16:8807563-8849325	0	+	8807563	8807563	8553170	4	3615,76,116,1602,	0,4074,5427,40160,
#Deleted in new
chr16	8847649	8848724	chr16:8847649-8848724	3	-	8847649	8847649	8553170	2	341,89,	0,986,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	8852941	8868401	chr16:8852941-8868401	1	-	8855163	8859328	0	4	2385,123,165,353,	0,5408,6229,15107,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	8852942	8861810	chr16:8852942-8861810	1	-	8855163	8859328	0	4	2384,123,165,169,	0,5407,6228,8699,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	8852942	8869012	chr16:8852942-8869012	3	-	8855163	8859328	0	5	2384,123,165,114,47,	0,5407,6228,7162,16023,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	8852942	8861810	chr16:8852942-8861810	1	-	8855163	8859328	0	5	2384,123,165,114,145,	0,5407,6228,7162,8723,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	8852942	8868719	chr16:8852942-8868719	1	-	8855163	8859328	0	5	2384,123,165,112,188,	0,5407,6228,15106,15589,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	8852942	8867428	chr16:8852942-8867428	1	-	8855163	8859328	0	4	2384,123,165,177,	0,5407,6228,14309,
#Partially deleted in new
chr16	8853311	8854347	chr16:8853311-8854347	3	+	8853311	8853311	8553170	2	325,84,	0,952,
#Partially deleted in new
chr16	8854912	8869009	chr16:8854912-8869009	1	-	8855163	8859328	0	4	414,123,165,44,	0,3437,4258,14053,
#Partially deleted in new
chr16	8854920	8868361	chr16:8854920-8868361	1	-	8855163	8859328	0	4	406,123,165,35,	0,3429,4250,13406,
#Partially deleted in new
chr16	8855064	8861713	chr16:8855064-8861713	1	-	8855163	8859328	0	4	262,123,165,48,	0,3285,4106,6601,
#Partially deleted in new
chr16	8855213	8869006	chr16:8855213-8869006	0	-	8855213	8859328	789624	5	113,123,165,114,41,	0,3136,3957,4891,13752,
#Partially deleted in new
chr16	8855230	8867887	chr16:8855230-8867887	0	-	8855230	8859328	789624	4	96,123,165,181,	0,3119,3940,12476,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	8855233	8868719	chr16:8855233-8868719	0	-	8855233	8859328	789624	5	93,123,165,112,188,	0,3116,3937,12815,13298,
#Partially deleted in new
chr16	8855270	8867428	chr16:8855270-8867428	0	-	8855270	8859328	789624	4	56,123,165,177,	0,3079,3900,11981,
#Partially deleted in new
chr16	8855289	8861777	chr16:8855289-8861777	0	-	8855289	8861660	789624	4	37,123,165,136,	0,3060,3881,6352,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	8857463	8869006	chr16:8857463-8869006	0	-	8857463	8857463	8553170	2	1872,41,	0,11502,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	8858089	8868343	chr16:8858089-8868343	1	-	8858345	8859328	789624	3	383,165,295,	0,1081,9959,
#Partially deleted in new
chr16	8858417	8861773	chr16:8858417-8861773	0	-	8858417	8859328	789624	4	55,165,114,108,	0,753,1687,3248,
#Partially deleted in new
chr16	8858912	8869006	chr16:8858912-8869006	0	-	8858912	8858912	8553170	3	423,114,41,	0,1192,10053,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	8859063	8868354	chr16:8859063-8868354	0	-	8859063	8859063	8553170	2	272,306,	0,8985,
#Partially deleted in new
chr16	8859330	8861781	chr16:8859330-8861781	0	-	8859330	8859330	8553170	3	5,205,140,	0,774,2311,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	8859812	8860456	chr16:8859812-8860456	0	+	8859812	8859812	8553170	1	644,	0,
#Partially deleted in new
chr16	8869250	8870032	chr16:8869250-8870032	3	+	8869250	8869250	8553170	2	78,420,	0,362,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	8881633	8885339	chr16:8881633-8885339	3	+	8884355	8885295	789624	4	877,77,143,153,	0,1576,2689,3553,
#Partially deleted in new
chr16	8882474	8885351	chr16:8882474-8885351	1	+	8884355	8885295	789624	4	316,77,143,165,	0,735,1848,2712,
#Partially deleted in new
chr16	8882697	8885179	chr16:8882697-8885179	1	+	8884355	8885143	789624	4	93,77,143,85,	0,512,1625,2397,
#Partially deleted in new
chr16	8892093	8963484	chr16:8892093-8963484	3	-	8893997	8963285	0	31	2011,91,72,120,100,101,78,109,68,154,101,68,93,106,102,135,131,145,157,110,83,91,81,55,131,109,89,139,199,105,278,	0,2456,2690,2937,3548,4905,6266,6437,7027,7510,8436,8896,9048,9988,10287,11174,12341,13093,14332,16247,18651,23160,23351,24408,24932,26937,28265,29063,31121,38199,71113,
#Partially deleted in new
chr16	8892771	8963422	chr16:8892771-8963422	0	-	8921263	8963285	789624	31	1333,91,72,120,100,101,78,109,68,154,101,68,93,106,102,135,131,145,157,110,83,91,81,55,131,109,89,139,60,105,216,	0,1778,2012,2259,2870,4227,5588,5759,6349,6832,7758,8218,8370,9310,9609,10496,11663,12415,13654,15569,17973,22482,22673,23730,24254,26259,27587,28385,30582,37521,70435,
#Partially deleted in new
chr16	8893787	8936729	chr16:8893787-8936729	1	-	8893997	8936613	0	31	317,91,72,120,100,101,78,109,68,154,101,68,93,106,102,135,131,145,157,110,83,91,81,55,131,109,89,139,199,105,147,	0,762,996,1243,1854,3211,4572,4743,5333,5816,6742,7202,7354,8294,8593,9480,10647,11399,12638,14553,16957,21466,21657,22714,23238,25243,26571,27369,29427,36505,42795,
#Partially deleted in new
chr16	8893939	8936673	chr16:8893939-8936673	0	-	8929535	8936613	789624	32	165,91,72,120,100,101,78,109,68,154,101,68,93,106,102,135,131,145,157,110,83,91,81,55,131,109,89,139,199,175,105,91,	0,610,844,1091,1702,3059,4420,4591,5181,5664,6590,7050,7202,8142,8441,9328,10495,11247,12486,14401,16805,21314,21505,22562,23086,25091,26419,27217,29275,35429,36353,42643,
#Partially deleted in new
chr16	8895044	8956380	chr16:8895044-8956380	0	-	8895044	8923300	789624	29	106,100,101,78,109,68,154,101,68,93,106,102,135,131,145,157,110,83,91,81,55,131,109,89,139,199,175,105,73,	0,597,1954,3315,3486,4076,4559,5485,5945,6097,7037,7336,8223,9390,10142,11381,13296,15700,20209,20400,21457,21981,23986,25314,26112,28170,34324,35248,61263,
#Partially deleted in new
chr16	8895058	8897254	chr16:8895058-8897254	0	-	8895058	8895058	8553170	3	92,100,256,	0,583,1940,
#Partially deleted in new
chr16	8895083	8898544	chr16:8895083-8898544	0	-	8895083	8895083	8553170	4	67,100,101,185,	0,558,1915,3276,
#Partially deleted in new
chr16	8897063	8898720	chr16:8897063-8898720	0	-	8897063	8897063	8553170	3	36,78,190,	0,1296,1467,
#Deleted in new
chr16	8898593	8901205	chr16:8898593-8901205	0	-	8899614	8901205	789624	4	46,68,154,64,	0,527,1010,2548,
#Deleted in new
chr16	8899149	8900131	chr16:8899149-8900131	0	-	8899149	8899149	8553170	2	39,528,	0,454,
#Deleted in new
chr16	8899174	8901185	chr16:8899174-8901185	0	-	8900622	8901185	789624	4	14,154,101,44,	0,429,1355,1967,
#Deleted in new
chr16	8899306	8901219	chr16:8899306-8901219	0	-	8899306	8899306	8553170	4	451,101,68,78,	0,1223,1683,1835,
#Deleted in new
chr16	8899579	8900920	chr16:8899579-8900920	0	-	8899579	8899579	8553170	2	178,391,	0,950,
#Partially deleted in new
chr16	8901932	8904533	chr16:8901932-8904533	0	-	8901932	8901932	8553170	4	255,102,135,99,	0,448,1335,2502,
#Partially deleted in new
chr16	8902138	8904522	chr16:8902138-8904522	0	-	8902138	8902138	8553170	3	344,135,88,	0,1129,2296,
#Partially deleted in new
chr16	8902142	8949653	chr16:8902142-8949653	0	-	8903361	8930302	789624	18	45,102,135,90,145,157,110,83,91,81,55,131,109,89,139,199,105,100,	0,238,1125,2292,3044,4283,6198,8602,13111,13302,14359,14883,16888,18216,19014,21072,28150,47411,
#Partially deleted in new
chr16	8920404	8956380	chr16:8920404-8956380	0	-	8920404	8930302	789624	5	43,139,199,105,73,	0,752,2810,9888,35903,
#Partially deleted in new
chr16	8920442	8964514	chr16:8920442-8964514	0	-	8920442	8930302	789624	5	5,139,199,105,121,	0,714,2772,9850,43951,
#Partially deleted in new
chr16	8921159	8962612	chr16:8921159-8962612	0	-	8921159	8962512	789624	4	136,199,105,137,	0,2055,9133,41316,
#Partially deleted in new
chr16	8921176	8935856	chr16:8921176-8935856	0	-	8921176	8930302	789624	4	119,199,105,56,	0,2038,9116,14624,
#Partially deleted in new
chr16	8923306	8935758	chr16:8923306-8935758	0	-	8923306	8923306	8553170	4	107,175,105,116,	0,6062,6986,12336,
#Partially deleted in new
chr16	8962705	8966990	chr16:8962705-8966990	3	+	8962705	8962705	8553170	2	189,238,	0,4047,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	9068553	9072412	chr16:9068553-9072412	3	+	9068553	9068553	8553170	3	100,131,522,	0,2299,3337,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	9091647	9121640	chr16:9091647-9121640	3	+	9092044	9116912	789624	4	623,81,276,4973,	0,1273,11336,25020,
#Duplicated in new
chr16	9092190	9113181	chr16:9092190-9113181	0	+	9092190	9103273	789624	3	80,81,10198,	0,730,10793,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	9104847	9113181	chr16:9104847-9113181	3	+	9104847	9104847	8553170	1	8334,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	9105833	9107174	chr16:9105833-9107174	3	-	9105833	9105833	8553170	2	67,664,	0,677,
#Partially deleted in new
chr16	9156401	9156881	chr16:9156401-9156881	7	-	9156401	9156401	16724991	1	480,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	9355587	9408093	chr16:9355587-9408093	3	+	9355587	9355587	789624	3	193,54,5051,	0,46142,47455,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	9441293	9444985	chr16:9441293-9444985	3	-	9441293	9441293	789624	4	224,91,168,53,	0,1210,2691,3639,
#Partially deleted in new
chr16	9446009	9455505	chr16:9446009-9455505	3	-	9446009	9446009	789624	5	59,59,134,105,94,	0,161,1899,3710,9402,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	9466654	9517564	chr16:9466654-9517564	3	+	9466654	9466654	8553170	6	356,120,64,80,71,105,	0,34837,35069,48044,50528,50805,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	9542044	9614894	chr16:9542044-9614894	3	+	9542044	9542044	8553170	5	129,85,207,153,374,	0,16948,22590,24393,72476,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	9564389	9564497	chr16:9564389-9564497	7	-	9564389	9564389	16724991	1	108,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	9600096	9600228	chr16:9600096-9600228	7	+	9600096	9600096	16724991	1	132,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	9753403	10182754	chr16:9753403-10182754	3	-	9763148	10180411	0	14	11545,239,188,161,230,126,154,169,206,115,593,432,191,101,	0,15447,44873,68860,76019,80701,87243,87532,96352,137582,184555,426594,428473,429250,
#Partially deleted in new
chr16	9762674	9970795	chr16:9762674-9970795	0	-	9762674	9762674	8553170	13	754,1177,239,188,161,230,126,154,169,206,115,593,53,	0,1097,6176,35602,59589,66748,71430,77972,78261,87081,128311,175284,208068,
#Partially deleted in new
chr16	9762675	9938558	chr16:9762675-9938558	1	-	9763354	9938554	789624	12	753,1177,239,188,161,230,126,154,169,206,115,600,	0,1096,6175,35601,59588,66747,71429,77971,78260,87080,128310,175283,
#Partially deleted in new
chr16	9762686	10121576	chr16:9762686-10121576	0	-	9762686	9762686	8553170	12	2262,239,188,161,230,126,154,169,206,115,593,249,	0,6164,35590,59577,66736,71418,77960,78249,87069,128299,175272,358641,
#Partially deleted in new
chr16	9762891	10181887	chr16:9762891-10181887	1	-	9763354	10180411	0	14	537,1177,239,188,161,230,126,154,169,206,115,593,432,11,	0,880,5959,35385,59372,66531,71213,77755,78044,86864,128094,175067,417106,418985,
#Partially deleted in new
chr16	9763060	10182406	chr16:9763060-10182406	1	-	9763148	10180411	0	13	1888,239,188,161,230,126,154,169,206,115,593,432,530,	0,5790,35216,59203,66362,71044,77586,77875,86695,127925,174898,416937,418816,
#Partially deleted in new
chr16	9764838	9769228	chr16:9764838-9769228	0	-	9764838	9764838	8553170	2	110,378,	0,4012,
#Partially deleted in new
chr16	9794636	9805571	chr16:9794636-9805571	3	+	9794636	9794636	8553170	2	86,93,	0,10842,
#Partially deleted in new
chr16	9849886	10031564	chr16:9849886-10031564	0	-	9849886	9849886	8553170	3	75,115,240,	0,41099,181438,
#Partially deleted in new
chr16	9937715	10027700	chr16:9937715-10027700	0	-	9937715	9937715	8553170	3	836,166,140,	0,5415,89845,
#Partially deleted in new
chr16	9937724	10180003	chr16:9937724-10180003	0	-	9937954	10180003	789624	2	827,6,	0,242273,
#Partially deleted in new
chr16	9938152	10031580	chr16:9938152-10031580	0	-	9938152	9938152	8553170	2	399,256,	0,93172,
#Partially deleted in new
chr16	10033683	10037297	chr16:10033683-10037297	3	+	10033683	10033683	8553170	2	176,312,	0,3302,
#Deleted in new
chr16	10111381	10112885	chr16:10111381-10112885	7	+	10111381	10111381	16724991	1	1504,	0,
#Partially deleted in new
chr16	10171455	10180090	chr16:10171455-10180090	0	-	10171455	10171455	8553170	2	73,93,	0,8542,
#Deleted in new
chr16	10179490	10182259	chr16:10179490-10182259	0	-	10179490	10179490	8553170	2	939,383,	0,2386,
#Deleted in new
chr16	10180352	10180784	chr16:10180352-10180784	0	-	10180352	10180411	789624	2	77,23,	0,409,
#Deleted in new
chr16	10180380	10181638	chr16:10180380-10181638	0	-	10180380	10180411	789624	2	49,51,	0,1207,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	10214783	10227581	chr16:10214783-10227581	3	-	10214783	10214783	8553170	4	1395,83,209,173,	0,1589,10998,12625,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	10221774	10222073	chr16:10221774-10222073	3	-	10221774	10221774	8553170	1	299,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	10351439	10352752	chr16:10351439-10352752	3	-	10351439	10351439	8553170	1	1313,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	10386054	10483638	chr16:10386054-10483638	1	+	10430620	10481899	789624	12	68,43,149,845,125,135,99,158,74,56,86,1803,	0,33526,42813,44556,47470,52046,54309,71317,86055,87424,94824,95781,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	10386054	10483638	chr16:10386054-10483638	3	+	10430620	10482249	789624	12	68,149,845,125,135,99,158,74,56,67,86,1803,	0,42813,44556,47470,52046,54309,71317,86055,87424,87868,94824,95781,
#Deleted in new
chr16	10386057	10387741	chr16:10386057-10387741	0	+	10386057	10386057	8553170	3	65,147,364,	0,1086,1320,
#Partially deleted in new
chr16	10386058	10482486	chr16:10386058-10482486	1	+	10472125	10482249	789624	6	64,74,56,67,86,651,	0,86051,87420,87864,94820,95777,
#Partially deleted in new
chr16	10386060	10482118	chr16:10386060-10482118	0	+	10430620	10473950	789624	10	62,149,845,125,135,99,56,67,86,283,	0,42807,44550,47464,52040,54303,87418,87862,94818,95775,
#Deleted in new
chr16	10386060	10387741	chr16:10386060-10387741	0	+	10386060	10386060	8553170	1	1681,	0,
#Partially deleted in new
chr16	10386060	10430843	chr16:10386060-10430843	0	+	10430620	10430843	789624	4	62,147,117,233,	0,1083,1317,44550,
#Partially deleted in new
chr16	10386060	10430699	chr16:10386060-10430699	0	+	10430620	10430699	789624	5	62,147,117,149,89,	0,1083,1317,42807,44550,
#Deleted in new
chr16	10387091	10387737	chr16:10387091-10387737	0	+	10387091	10387091	8553170	2	199,360,	0,286,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	10428900	10483638	chr16:10428900-10483638	0	+	10430620	10472112	789624	10	116,845,125,135,99,74,56,67,86,1803,	0,1710,4624,9200,11463,43209,44578,45022,51978,52935,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	10430594	10483637	chr16:10430594-10483637	1	+	10430620	10481899	789624	9	861,125,135,99,158,74,56,86,1802,	0,2930,7506,9769,26777,41515,42884,50284,51241,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	10430594	10483637	chr16:10430594-10483637	1	+	10430620	10482249	789624	10	861,125,135,99,158,74,56,67,86,1802,	0,2930,7506,9769,26777,41515,42884,43328,50284,51241,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	10445308	10449747	chr16:10445308-10449747	3	-	10445308	10445308	8553170	1	4439,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	10454021	10457611	chr16:10454021-10457611	0	+	10454021	10454021	8553170	2	318,292,	0,3298,
#Partially deleted in new
chr16	10471923	10480963	chr16:10471923-10480963	0	+	10471923	10471923	8553170	4	260,56,67,85,	0,1555,1999,8955,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	10496271	10496374	chr16:10496271-10496374	3	+	10496271	10496271	8553170	1	103,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	10514841	10528202	chr16:10514841-10528202	3	-	10514841	10514841	789624	2	391,111,	0,13250,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	10528421	10580698	chr16:10528421-10580698	3	-	10532904	10547617	789624	5	4671,147,91,138,150,	0,9506,15148,19118,52127,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	10529439	10532082	chr16:10529439-10532082	3	+	10529439	10529439	8553170	2	260,273,	0,2370,
#Partially deleted in new
chr16	10532848	10559154	chr16:10532848-10559154	1	-	10532904	10547617	789624	5	244,147,91,138,161,	0,5079,10721,14691,26145,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	10544179	10580632	chr16:10544179-10580632	0	-	10544179	10544179	8553170	2	3498,84,	0,36369,
#Deleted in new
chr16	10576498	10578183	chr16:10576498-10578183	3	-	10576498	10576498	8553170	2	278,157,	0,1528,
#Partially deleted in new
chr16	10627500	10694945	chr16:10627500-10694945	3	-	10627582	10694873	789624	7	299,155,223,144,71,84,636,	0,8263,48458,54492,61752,62441,66809,
#Partially deleted in new
chr16	10635763	10690119	chr16:10635763-10690119	0	-	10635763	10689290	789624	5	155,223,144,71,178,	0,40195,46229,53489,54178,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	10691272	10692973	chr16:10691272-10692973	3	+	10691272	10691272	8553170	2	127,356,	0,1345,
#Deleted in new
chr16	10718632	10719762	chr16:10718632-10719762	7	-	10718632	10718632	16724991	1	1130,	0,
#Deleted in new
chr16	10719832	10720015	chr16:10719832-10720015	7	+	10719832	10719832	16724991	1	183,	0,
#Deleted in new
chr16	10720014	10721464	chr16:10720014-10721464	7	-	10720014	10720014	16724991	1	1450,	0,
#Deleted in new
chr16	10721697	10723068	chr16:10721697-10723068	7	-	10721697	10721697	16724991	1	1371,	0,
#Deleted in new
chr16	10723064	10723355	chr16:10723064-10723355	7	-	10723064	10723064	16724991	1	291,	0,
#Deleted in new
chr16	10723423	10723766	chr16:10723423-10723766	7	-	10723423	10723423	16724991	1	343,	0,
#Deleted in new
chr16	10723835	10724617	chr16:10723835-10724617	7	-	10723835	10723835	16724991	1	782,	0,
#Deleted in new
chr16	10724619	10725296	chr16:10724619-10725296	7	-	10724619	10724619	16724991	1	677,	0,
#Partially deleted in new
chr16	10743785	10757994	chr16:10743785-10757994	0	+	10743863	10757994	789624	6	97,105,134,33,91,122,	0,175,3357,11935,12904,14087,
#Partially deleted in new
chr16	10743840	10763834	chr16:10743840-10763834	0	+	10743840	10743840	8553170	10	42,105,134,69,33,91,155,111,103,294,	0,120,3302,8769,11880,12849,14032,17523,17916,19700,
#Partially deleted in new
chr16	10743843	10762112	chr16:10743843-10762112	0	+	10743843	10743843	8553170	7	39,105,134,69,155,111,356,	0,117,3299,8766,14029,17520,17913,
#Partially deleted in new
chr16	10743844	10769351	chr16:10743844-10769351	3	+	10743863	10769105	789624	11	38,105,134,69,33,91,155,111,103,84,305,	0,116,3298,8765,11876,12845,14028,17519,17912,24104,25202,
#Partially deleted in new
chr16	10743854	10769351	chr16:10743854-10769351	1	+	10743863	10769105	789624	10	28,105,134,69,91,155,111,103,84,305,	0,106,3288,8755,12835,14018,17509,17902,24094,25192,
#Partially deleted in new
chr16	10757872	10769351	chr16:10757872-10769351	0	+	10757872	10769105	789624	4	155,111,103,305,	0,3491,3884,11174,
#Partially deleted in new
chr16	10758010	10769351	chr16:10758010-10769351	0	+	10758010	10768011	789624	4	17,111,84,305,	0,3353,9938,11036,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	10760918	10818607	chr16:10760918-10818607	0	-	10760918	10760918	789624	9	650,206,60,129,129,90,145,42,123,	0,2639,9353,10751,12394,13120,14033,39378,57566,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	10760931	10818656	chr16:10760931-10818656	0	-	10775522	10818493	8553170	10	637,206,606,333,60,129,90,596,80,172,	0,2626,5106,7837,9340,12381,13107,14020,57171,57553,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	10761225	10818600	chr16:10761225-10818600	0	-	10770271	10818493	789624	9	343,206,60,129,129,90,70,80,116,	0,2332,9046,10444,12087,12813,47311,56877,57259,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	10761225	10818600	chr16:10761225-10818600	0	-	10761225	10761225	789624	9	343,206,116,60,129,129,90,80,116,	0,2332,4812,9046,10444,12087,12813,56877,57259,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	10761225	10818600	chr16:10761225-10818600	0	-	10770271	10818493	789624	9	343,206,60,129,129,90,145,80,116,	0,2332,9046,10444,12087,12813,13726,56877,57259,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	10761225	10818600	chr16:10761225-10818600	3	-	10770271	10818493	789624	9	343,206,60,129,129,90,145,80,116,	0,2332,9046,10444,12087,12813,13726,56877,57259,
#Partially deleted in new
chr16	10765023	10769313	chr16:10765023-10769313	0	+	10765023	10765023	8553170	3	121,84,267,	0,2925,4023,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	10766675	10818785	chr16:10766675-10818785	1	-	10770271	10818493	789624	8	2426,60,129,129,90,145,80,301,	0,3596,4994,6637,7363,8276,51427,51809,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	10766675	10774996	chr16:10766675-10774996	0	-	10770271	10774996	789624	6	2803,60,129,129,90,45,	0,3596,4994,6637,7363,8276,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	10766675	10818651	chr16:10766675-10818651	0	-	10775522	10818493	789624	8	2426,60,129,129,90,596,80,167,	0,3596,4994,6637,7363,8276,51427,51809,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	10766680	10773441	chr16:10766680-10773441	0	-	10770271	10773441	789624	3	2798,60,129,	0,3591,6632,
#Partially deleted in new
chr16	10769239	10775031	chr16:10769239-10775031	0	-	10769445	10775031	789624	5	239,129,129,90,80,	0,2430,4073,4799,5712,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	10775013	10818794	chr16:10775013-10818794	0	-	10775013	10775013	8553170	5	83,42,70,80,310,	0,25283,33523,43089,43471,
#Deleted in new
chr16	10840383	10841544	chr16:10840383-10841544	7	-	10840383	10840383	16724991	1	1161,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	10864913	10888752	chr16:10864913-10888752	3	-	10864913	10864913	8553170	2	137,438,	0,23401,
#Partially deleted in new
chr16	10866221	10902104	chr16:10866221-10902104	0	+	10866289	10902104	789624	7	351,147,96,63,81,45,67,	0,29060,29447,32448,32700,35292,35816,
#Partially deleted in new
chr16	10866259	10901564	chr16:10866259-10901564	0	+	10895301	10901564	789624	6	60,147,96,63,81,51,	0,29022,29409,32410,32662,35254,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr16	10877197	10936388	chr16:10877197-10936388	3	+	10877330	10923303	789624	20	185,147,96,63,78,45,147,144,165,69,1651,159,72,81,93,87,84,84,98,12511,	0,18084,18471,21472,21727,24316,24840,25460,26533,27546,29301,31831,32990,38372,39169,41242,44969,45209,46030,46680,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr16	10877197	10924983	chr16:10877197-10924983	1	+	10877330	10910243	789624	18	185,147,96,63,78,45,147,144,165,69,72,81,93,87,84,84,98,1106,	0,18084,18471,21472,21727,24316,24840,25460,26533,27546,32990,38372,39169,41242,44969,45209,46030,46680,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr16	10877197	10924983	chr16:10877197-10924983	1	+	10877330	10923303	789624	20	185,147,96,63,81,45,147,144,165,69,1651,159,72,81,93,87,84,84,98,1106,	0,18084,18471,21472,21724,24316,24840,25460,26533,27546,29301,31831,32990,38372,39169,41242,44969,45209,46030,46680,
#Partially deleted in new
chr16	10877199	10888638	chr16:10877199-10888638	0	-	10877199	10877199	8553170	2	167,324,	0,11115,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr16	10877209	10924437	chr16:10877209-10924437	1	+	10877330	10923303	789624	18	173,147,96,63,78,45,144,165,69,205,72,81,93,87,84,84,98,560,	0,18072,18459,21460,21715,24304,25448,26521,27534,31773,32978,38360,39157,41230,44957,45197,46018,46668,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr16	10877209	10924804	chr16:10877209-10924804	0	+	10877209	10877209	8553170	19	173,147,96,63,78,45,147,144,165,69,2689,72,81,93,87,84,84,98,927,	0,18072,18459,21460,21715,24304,24828,25448,26521,27534,29289,32978,38360,39157,41230,44957,45197,46018,46668,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	10877215	10908887	chr16:10877215-10908887	0	+	10877215	10877215	8553170	10	167,147,96,63,81,45,144,165,69,2389,	0,18066,18453,21454,21706,24298,25442,26515,27528,29283,
#Partially deleted in new
chr16	10877222	10902722	chr16:10877222-10902722	0	+	10877330	10901835	789624	8	160,147,96,63,78,45,387,65,	0,18059,18446,21447,21702,24291,24575,25435,
#Partially deleted in new
chr16	10877330	10910243	chr16:10877330-10910243	0	+	10877330	10877330	8553170	11	52,147,96,63,78,45,147,144,165,69,56,	0,17951,18338,21339,21594,24183,24707,25327,26400,27413,32857,
#Partially deleted in new
chr16	10878968	10902160	chr16:10878968-10902160	0	+	10895301	10902160	789624	7	74,147,96,63,78,45,123,	0,16313,16700,19701,19956,22545,23069,
#Deleted in new
chr16	10901558	10902037	chr16:10901558-10902037	0	+	10901558	10901558	8553170	1	479,	0,
#Partially deleted in new
chr16	10915645	10917010	chr16:10915645-10917010	0	+	10915645	10915645	8553170	3	5,93,462,	0,721,903,
#Partially deleted in new
chr16	10922166	10943021	chr16:10922166-10943021	0	+	10922166	10923303	789624	5	84,84,98,85,1836,	0,240,1061,12949,19019,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	10922166	10936388	chr16:10922166-10936388	0	+	10922166	10923303	789624	4	84,84,98,1273,	0,240,1061,12949,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	10922924	10923992	chr16:10922924-10923992	0	+	10922924	10922924	8553170	2	401,115,	0,953,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	10928163	10932222	chr16:10928163-10932222	0	+	10928163	10928163	8553170	2	169,398,	0,3661,
#Partially deleted in new
chr16	10928890	10942460	chr16:10928890-10942460	3	-	10941717	10942005	789624	2	669,892,	0,12678,
#Partially deleted in new
chr16	10928890	10942131	chr16:10928890-10942131	1	-	10941717	10942005	789624	3	669,161,563,	0,4953,12678,
#Partially deleted in new
chr16	10928941	10941718	chr16:10928941-10941718	0	-	10928941	10928941	8553170	3	133,343,150,	0,275,12627,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	10933902	10936280	chr16:10933902-10936280	3	+	10933902	10933902	8553170	1	2378,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	10936606	10942460	chr16:10936606-10942460	1	-	10941717	10942005	789624	1	5854,	0,
#Deleted in new
chr16	10940718	10943021	chr16:10940718-10943021	0	+	10940718	10940718	8553170	2	311,1836,	0,467,
#Partially deleted in new
chr16	10944487	11182189	chr16:10944487-11182189	3	+	10944717	11178690	789624	24	310,129,134,149,106,6,124,175,54,114,232,133,101,123,110,45,51,129,121,152,205,168,165,3855,	0,13294,17967,24673,26637,28066,28450,32737,34841,38390,58586,75705,80333,95266,97766,99540,102804,107025,116414,176127,179254,181491,221900,233847,
#Partially deleted in new
chr16	10944580	11126787	chr16:10944580-11126787	1	+	10944717	11126280	789624	21	217,129,134,149,106,124,175,54,114,184,133,101,123,110,45,51,129,121,152,205,809,	0,13201,17874,24580,26544,28357,32644,34748,38297,58493,75612,80240,95173,97673,99447,102711,106932,116321,176034,179161,181398,
#Partially deleted in new
chr16	10972480	11024919	chr16:10972480-11024919	0	+	10972480	10972480	8553170	8	79,124,175,54,114,232,133,99,	0,457,4744,6848,10397,30593,47712,52340,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	11024152	11048518	chr16:11024152-11048518	0	+	11024152	11024152	8553170	5	109,101,2610,45,1227,	0,668,15601,19875,23139,
#Partially deleted in new
chr16	11024472	11047342	chr16:11024472-11047342	0	+	11024472	11024472	8553170	7	54,101,46,123,110,45,51,	0,348,11574,15281,17781,19555,22819,
#Partially deleted in new
chr16	11024479	11123920	chr16:11024479-11123920	0	+	11024479	11024479	8553170	10	92,101,123,110,45,51,129,121,152,179,	0,341,15274,17774,19548,22812,27033,36422,96135,99262,
#Partially deleted in new
chr16	11024507	11136283	chr16:11024507-11136283	0	+	11024507	11024507	8553170	12	64,101,123,110,78,51,129,121,152,205,168,215,	0,313,15246,17746,19520,22784,27005,36394,96107,99234,101471,111561,
#Partially deleted in new
chr16	11024817	11044222	chr16:11024817-11044222	0	+	11024817	11024817	8553170	4	104,123,110,195,	0,14936,17436,19210,
#Partially deleted in new
chr16	11024866	11048512	chr16:11024866-11048512	0	+	11024866	11024866	8553170	6	55,123,110,45,51,194,	0,14887,17387,19161,22425,23452,
#Deleted in new
chr16	11027023	11027763	chr16:11027023-11027763	7	+	11027023	11027023	16724991	1	740,	0,
#Deleted in new
chr16	11056555	11057034	chr16:11056555-11057034	3	+	11056555	11056555	8553170	1	479,	0,
#Partially deleted in new
chr16	11066495	11071102	chr16:11066495-11071102	3	-	11066495	11066495	8553170	3	258,145,207,	0,4028,4400,
#Partially deleted in new
chr16	11123742	11157225	chr16:11123742-11157225	0	+	11123742	11157090	789624	3	204,168,149,	0,2236,33334,
#Partially deleted in new
chr16	11123894	11157233	chr16:11123894-11157233	0	+	11123894	11157104	789624	4	52,168,109,157,	0,2084,32679,33182,
#Partially deleted in new
chr16	11123899	11182181	chr16:11123899-11182181	0	+	11123899	11174230	789624	5	47,168,165,124,3847,	0,2079,42488,50254,54435,
#Partially deleted in new
chr16	11126009	11150317	chr16:11126009-11150317	0	+	11126009	11149929	789624	2	137,432,	0,23876,
#Deleted in new
chr16	11242652	11243552	chr16:11242652-11243552	7	+	11242652	11242652	16724991	1	900,	0,
#Partially deleted in new
chr16	11249618	11316961	chr16:11249618-11316961	0	+	11249618	11249618	8553170	2	160,510,	0,66833,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	11249626	11381662	chr16:11249626-11381662	0	+	11249626	11249626	8553170	3	152,66,865,	0,130195,131171,
#Partially deleted in new
chr16	11249648	11351755	chr16:11249648-11351755	3	+	11316778	11350790	0	5	130,79,109,433,1114,	0,45567,63180,66803,100993,
#Deleted in new
chr16	11254404	11256179	chr16:11254404-11256179	1	-	11254842	11255478	789624	2	1124,101,	0,1674,
#Deleted in new
chr16	11254416	11256200	chr16:11254416-11256200	3	-	11254842	11255478	789624	1	1784,	0,
#Deleted in new
chr16	11267747	11269533	chr16:11267747-11269533	1	-	11268851	11269262	789624	1	1786,	0,
#Deleted in new
chr16	11267856	11269332	chr16:11267856-11269332	3	-	11267995	11269262	789624	2	156,470,	0,1006,
#Deleted in new
chr16	11273217	11273641	chr16:11273217-11273641	3	-	11273283	11273595	789624	1	424,	0,
#Deleted in new
chr16	11274112	11274236	chr16:11274112-11274236	3	-	11274112	11274112	8553170	1	124,	0,
#Partially deleted in new
chr16	11275638	11276480	chr16:11275638-11276480	3	-	11275899	11276370	0	2	299,381,	0,461,
#Partially deleted in new
chr16	11275639	11276480	chr16:11275639-11276480	1	-	11275829	11276370	0	2	342,381,	0,460,
#Deleted in new
chr16	11280835	11281350	chr16:11280835-11281350	3	-	11280991	11281238	0	2	200,224,	0,291,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	11306439	11306527	chr16:11306439-11306527	3	-	11306439	11306439	5263520	1	88,	0,
#Partially deleted in new
chr16	11312899	11317036	chr16:11312899-11317036	0	+	11312899	11312899	8553170	2	38,896,	0,3241,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	11315066	11315178	chr16:11315066-11315178	3	+	11315066	11315066	8553170	1	112,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	11341808	11345211	chr16:11341808-11345211	3	-	11341808	11341808	789624	2	615,99,	0,3304,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	11344350	11345197	chr16:11344350-11345197	1	-	11344350	11344350	8553170	2	420,85,	0,762,
#Partially deleted in new
chr16	11345430	11351762	chr16:11345430-11351762	1	+	11345471	11350790	0	2	336,1121,	0,5211,
#Partially deleted in new
chr16	11345449	11351365	chr16:11345449-11351365	1	+	11345471	11350653	789624	2	94,724,	0,5192,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	11345469	11381662	chr16:11345469-11381662	1	+	11345471	11379862	8553170	3	297,66,865,	0,34352,35328,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	11348142	11349321	chr16:11348142-11349321	3	-	11348142	11348142	8553170	2	941,154,	0,1025,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	11359844	11383705	chr16:11359844-11383705	0	-	11360253	11383705	789624	2	486,64,	0,23797,
#Partially deleted in new
chr16	11372014	11527245	chr16:11372014-11527245	3	-	11372733	11527175	789624	66	724,142,123,110,178,206,185,98,185,196,93,185,169,165,162,129,114,141,122,163,138,82,113,167,208,78,236,309,194,218,93,120,138,87,163,140,189,212,181,159,134,156,187,80,160,164,92,183,185,156,195,125,159,145,153,186,166,104,140,181,135,166,71,161,54,137,	0,11627,11871,12201,12873,13196,15096,18090,18264,19651,19995,20302,21376,24496,26333,27457,27687,29251,30022,32689,35185,39231,40826,42327,45617,51164,52094,53110,59021,63647,67474,68709,68924,74535,74733,75919,76904,78594,84844,87881,88462,88949,90102,97160,97493,99639,103609,104749,105806,106515,112864,115247,116694,119686,121629,122560,128789,130062,136701,142344,143914,144127,146885,149937,151405,155094,
#Partially deleted in new
chr16	11372014	11392065	chr16:11372014-11392065	0	-	11372733	11392065	789624	11	724,142,123,110,178,206,185,98,185,78,56,	0,11627,11871,12201,12873,13196,15096,18090,18264,19769,19995,
#Partially deleted in new
chr16	11380858	11381118	chr16:11380858-11381118	7	-	11380858	11380858	16724991	1	260,	0,
#Partially deleted in new
chr16	11387189	11390454	chr16:11387189-11390454	0	-	11387189	11387189	8553170	2	106,350,	0,2915,
#Partially deleted in new
chr16	11396403	11402264	chr16:11396403-11402264	0	-	11396403	11396403	8553170	6	272,162,129,114,141,228,	0,1944,3068,3298,4862,5633,
#Partially deleted in new
chr16	11402130	11414555	chr16:11402130-11414555	0	-	11402130	11402130	8553170	4	28,163,113,214,	0,2573,10710,12211,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr16	11442190	11491755	chr16:11442190-11491755	0	-	11485047	11491755	789624	23	331,77,87,163,140,189,212,181,159,134,156,187,107,80,160,164,92,183,185,156,195,159,55,	0,1193,4359,4557,5743,6728,8418,14668,17705,18286,18773,19926,24961,26984,27317,29463,33433,34573,35630,36339,42688,46518,49510,
#Partially deleted in new
chr16	11450700	11457139	chr16:11450700-11457139	0	-	11450700	11450700	8553170	2	120,281,	0,6158,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	11465259	11473174	chr16:11465259-11473174	3	+	11465259	11465259	789624	3	273,109,1897,	0,5355,6018,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	11547721	11587563	chr16:11547721-11587563	1	-	11549636	11556730	789624	4	2024,157,225,226,	0,5811,8789,39616,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	11547725	11586950	chr16:11547725-11586950	1	-	11549636	11556730	789624	4	2020,157,225,65,	0,5807,8785,39160,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	11547998	11586950	chr16:11547998-11586950	1	-	11551722	11556730	789624	5	1747,98,157,225,65,	0,3708,5534,8512,38887,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	11547999	11586373	chr16:11547999-11586373	1	-	11549636	11556730	789624	4	1746,157,225,228,	0,5533,8511,38146,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	11548602	11556736	chr16:11548602-11556736	1	-	11549436	11556730	789624	3	1144,157,226,	0,4930,7908,
#Partially deleted in new
chr16	11549106	11587247	chr16:11549106-11587247	1	-	11549636	11556730	789624	4	639,157,225,97,	0,4426,7404,38044,
#Partially deleted in new
chr16	11549311	11586903	chr16:11549311-11586903	1	-	11549737	11556730	789624	3	434,225,18,	0,7199,37574,
#Partially deleted in new
chr16	11549359	11556444	chr16:11549359-11556444	0	-	11556412	11556444	789624	3	386,157,39,	0,4173,7046,
#Partially deleted in new
chr16	11549447	11586919	chr16:11549447-11586919	0	-	11553722	11556730	789624	4	298,216,225,34,	0,4085,7063,37438,
#Partially deleted in new
chr16	11549601	11586919	chr16:11549601-11586919	1	-	11549636	11553630	789624	4	144,157,181,34,	0,3931,25804,37284,
#Partially deleted in new
chr16	11549612	11629210	chr16:11549612-11629210	3	-	11549636	11556730	789624	4	133,157,225,88,	0,3920,6898,79510,
#Partially deleted in new
chr16	11549625	11586919	chr16:11549625-11586919	1	-	11549636	11556730	789624	5	120,157,225,181,34,	0,3907,6885,25780,37260,
#Partially deleted in new
chr16	11549661	11598500	chr16:11549661-11598500	0	-	11549661	11556730	789624	4	84,157,225,113,	0,3871,6849,48726,
#Partially deleted in new
chr16	11549710	11586918	chr16:11549710-11586918	0	-	11549710	11556730	789624	5	35,157,225,143,33,	0,3822,6800,34479,37175,
#Partially deleted in new
chr16	11551722	11586373	chr16:11551722-11586373	1	-	11551722	11556730	789624	4	82,157,225,228,	0,1810,4788,34423,
#Partially deleted in new
chr16	11551772	11587289	chr16:11551772-11587289	0	-	11551772	11556730	789624	4	32,157,225,139,	0,1760,4738,35378,
#Partially deleted in new
chr16	11553422	11586941	chr16:11553422-11586941	1	-	11553528	11556730	789624	3	267,225,56,	0,3088,33463,
#Partially deleted in new
chr16	11556283	11586919	chr16:11556283-11586919	1	-	11556412	11556730	789624	2	452,34,	0,30602,
#Partially deleted in new
chr16	11556611	11586919	chr16:11556611-11586919	0	-	11556611	11556730	789624	3	124,429,34,	0,4534,30274,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	11556721	11636377	chr16:11556721-11636377	0	-	11556721	11633617	789624	4	14,105,129,308,	0,76811,79103,79348,
#Partially deleted in new
chr16	11668413	11679159	chr16:11668413-11679159	3	+	11676059	11676326	0	2	127,3185,	0,7561,
#Partially deleted in new
chr16	11679079	11742878	chr16:11679079-11742878	3	-	11679194	11742730	789624	12	758,81,110,143,793,201,113,94,130,98,217,402,	0,5085,8777,9223,12210,19045,21372,42497,51565,54902,56937,63397,
#Partially deleted in new
chr16	11679082	11690097	chr16:11679082-11690097	0	-	11679082	11679082	8553170	5	755,81,110,143,110,	0,5082,8774,9220,10905,
#Partially deleted in new
chr16	11684234	11688568	chr16:11684234-11688568	0	-	11684234	11684234	8553170	3	11,110,266,	0,3622,4068,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	11690733	11692242	chr16:11690733-11692242	0	-	11690733	11690733	8553170	1	1509,	0,
#Partially deleted in new
chr16	11691989	11736130	chr16:11691989-11736130	0	-	11691989	11736130	789624	5	93,201,113,94,114,	0,6135,8462,29587,44027,
#Partially deleted in new
chr16	11692013	11742547	chr16:11692013-11742547	0	-	11721612	11742547	789624	7	69,201,113,94,98,217,71,	0,6111,8438,29563,41968,44003,50463,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	11692049	11733999	chr16:11692049-11733999	0	-	11721612	11733999	789624	6	33,201,113,122,94,18,	0,6075,8402,29264,29527,41932,
#Partially deleted in new
chr16	11698133	11742794	chr16:11698133-11742794	0	-	11698133	11698133	8553170	5	192,94,98,217,318,	0,23443,35848,37883,44343,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	11741909	11744506	chr16:11741909-11744506	3	+	11741909	11741909	8553170	1	2597,	0,
#Partially deleted in new
chr16	11750585	11797267	chr16:11750585-11797267	3	-	11751316	11782354	0	23	921,164,134,109,106,134,77,182,101,197,162,187,65,205,284,34,39,81,159,198,40,102,144,	0,2083,5651,7845,10820,11324,12085,12892,14467,14903,16831,17729,18445,20197,23650,24394,25734,25866,26165,28580,30839,31701,46538,
#Partially deleted in new
chr16	11750585	11782552	chr16:11750585-11782552	1	-	11751316	11782354	0	22	921,164,134,109,106,134,77,182,101,197,162,187,65,205,284,34,39,81,159,198,40,266,	0,2083,5651,7845,10820,11324,12085,12892,14467,14903,16831,17729,18445,20197,23650,24394,25734,25866,26165,28580,30839,31701,
#Partially deleted in new
chr16	11750590	11753162	chr16:11750590-11753162	0	-	11750590	11750590	8553170	2	916,494,	0,2078,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	11750592	11759850	chr16:11750592-11759850	1	-	11751316	11758446	0	4	914,164,134,1420,	0,2076,5644,7838,
#Partially deleted in new
chr16	11750594	11765561	chr16:11750594-11765561	0	-	11758474	11765561	789624	10	912,164,134,109,44,134,77,182,101,73,	0,2074,5642,7836,10873,11315,12076,12883,14458,14894,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	11753665	11753948	chr16:11753665-11753948	3	-	11753665	11753665	8553170	1	283,	0,
#Partially deleted in new
chr16	11756321	11761662	chr16:11756321-11761662	0	-	11756321	11756321	8553170	3	49,109,257,	0,2109,5084,
#Partially deleted in new
chr16	11756328	11797232	chr16:11756328-11797232	0	-	11756328	11782354	789624	19	42,109,106,134,77,182,101,197,162,187,284,34,39,81,159,198,40,102,109,	0,2102,5077,5581,6342,7149,8724,9160,11088,11986,17907,18651,19991,20123,20422,22837,25096,25958,40795,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	11761947	11763229	chr16:11761947-11763229	0	-	11761947	11761947	8553170	2	96,559,	0,723,
#Partially deleted in new
chr16	11764964	11770841	chr16:11764964-11770841	0	-	11764964	11764964	8553170	6	189,197,162,187,65,59,	0,524,2452,3350,4066,5818,
#Partially deleted in new
chr16	11765516	11774292	chr16:11765516-11774292	0	-	11768484	11774292	789624	5	169,162,187,205,57,	0,1900,2798,5266,8719,
#Partially deleted in new
chr16	11765574	11768521	chr16:11765574-11768521	0	-	11765574	11765574	8553170	3	111,162,207,	0,1842,2740,
#Partially deleted in new
chr16	11767436	11776520	chr16:11767436-11776520	0	-	11767436	11776520	789624	7	142,187,65,205,284,34,69,	0,878,1594,3346,6799,7543,9015,
#Partially deleted in new
chr16	11775526	11797229	chr16:11775526-11797229	0	-	11775526	11775526	8553170	8	106,39,81,159,198,40,102,106,	0,793,925,1224,3639,5898,6760,21597,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	11776757	11783034	chr16:11776757-11783034	0	-	11776757	11782354	789624	5	152,198,40,102,171,	0,2408,4667,5529,6106,
#Partially deleted in new
chr16	11779239	11796527	chr16:11779239-11796527	0	-	11779239	11782354	789624	4	124,40,102,309,	0,2185,3047,16979,
#Partially deleted in new
chr16	11779261	11797246	chr16:11779261-11797246	0	-	11779261	11782354	789624	5	102,40,102,197,123,	0,2163,3025,16957,17862,
#Partially deleted in new
chr16	11779289	11796952	chr16:11779289-11796952	0	-	11779289	11782354	789624	5	74,40,102,197,119,	0,2135,2997,16929,17544,
#Deleted in new
chr16	11797467	11798275	chr16:11797467-11798275	3	+	11797467	11797467	8553170	1	808,	0,
#Partially deleted in new
chr16	11819828	11828828	chr16:11819828-11828828	0	-	11819828	11819828	789624	3	469,70,130,	0,8493,8870,
#Partially deleted in new
chr16	11819829	11828832	chr16:11819829-11828832	0	-	11819829	11819829	789624	3	468,285,134,	0,8492,8869,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	11819841	11828845	chr16:11819841-11828845	0	-	11819841	11819841	8553170	4	456,118,70,147,	0,1796,8480,8857,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	11819849	11828811	chr16:11819849-11828811	3	-	11819849	11819849	789624	4	448,122,213,490,	0,1784,4677,8472,
#Deleted in new
chr16	11819919	11820285	chr16:11819919-11820285	0	-	11819919	11819919	8553170	1	366,	0,
#Partially deleted in new
chr16	11819947	11828818	chr16:11819947-11828818	0	-	11819947	11819947	789624	2	350,120,	0,8751,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	11820150	11828811	chr16:11820150-11828811	0	-	11820150	11820150	789624	3	147,118,113,	0,1487,8548,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	11833849	11851585	chr16:11833849-11851585	3	-	11837786	11851512	789624	9	4264,291,126,94,102,149,139,140,178,	0,5845,7845,8057,12651,12845,13818,16429,17558,
#Partially deleted in new
chr16	11837717	11851580	chr16:11837717-11851580	0	-	11847791	11851512	789624	8	396,291,126,94,102,149,139,173,	0,1977,3977,4189,8783,8977,9950,13690,
#Partially deleted in new
chr16	11837954	11851518	chr16:11837954-11851518	0	-	11841804	11851512	789624	5	159,291,126,23,111,	0,1740,3740,3952,13453,
#Partially deleted in new
chr16	11837965	11851544	chr16:11837965-11851544	0	-	11837965	11851512	789624	9	148,291,123,94,102,149,139,140,137,	0,1729,3729,3941,8535,8729,9702,12313,13442,
#Partially deleted in new
chr16	11837969	11851518	chr16:11837969-11851518	0	-	11841964	11851512	789624	5	144,291,126,94,111,	0,1725,3725,3937,13438,
#Partially deleted in new
chr16	11839848	11851516	chr16:11839848-11851516	0	-	11839848	11851512	789624	7	137,126,94,149,139,140,109,	0,1846,2058,6846,7819,10430,11559,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	11841405	11846567	chr16:11841405-11846567	0	-	11841405	11841405	8553170	3	415,94,67,	0,501,5095,
#Partially deleted in new
chr16	11841707	11851542	chr16:11841707-11851542	0	-	11850390	11851512	789624	7	113,94,102,149,139,135,139,	0,199,4793,4987,5960,8571,9696,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	11846500	11851508	chr16:11846500-11851508	0	-	11849345	11851508	789624	6	102,149,139,128,140,101,	0,194,1167,2757,3778,4907,
#Partially deleted in new
chr16	11846559	11851045	chr16:11846559-11851045	0	-	11846559	11851010	789624	5	43,149,139,140,38,	0,135,1108,3719,4448,
#Partially deleted in new
chr16	11846733	11851232	chr16:11846733-11851232	0	-	11846733	11850325	789624	4	110,139,140,131,	0,934,3545,4368,
#Partially deleted in new
chr16	11847573	11851519	chr16:11847573-11851519	0	-	11847573	11847573	8553170	3	233,140,112,	0,2705,3834,
#Partially deleted in new
chr16	11851648	11895611	chr16:11851648-11895611	3	+	11851648	11851648	8553170	2	439,123,	0,43840,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	11868127	11915920	chr16:11868127-11915920	1	-	11873118	11915720	0	15	5044,169,90,174,81,94,141,155,181,78,34,228,42,42,552,	0,7633,7958,9279,14887,17053,18343,18649,19442,22934,26826,28430,29712,29866,47241,
#Partially deleted in new
chr16	11872678	11915878	chr16:11872678-11915878	1	-	11873118	11915720	0	15	493,169,90,174,81,94,141,155,181,78,34,225,42,42,510,	0,3082,3407,4728,10336,12502,13792,14098,14891,18383,22275,23879,25161,25315,42690,
#Partially deleted in new
chr16	11872681	11897881	chr16:11872681-11897881	0	-	11873118	11897881	789624	12	490,169,174,81,94,141,155,181,78,34,225,42,	0,3079,4725,10333,12499,13789,14095,14888,18380,22272,23876,25158,
#Partially deleted in new
chr16	11872683	11897888	chr16:11872683-11897888	1	-	11873118	11897861	0	13	488,169,90,174,81,94,141,155,181,78,34,228,49,	0,3077,3402,4723,10331,12497,13787,14093,14886,18378,22270,23874,25156,
#Partially deleted in new
chr16	11873118	11916082	chr16:11873118-11916082	3	-	11873118	11897861	0	15	53,169,90,174,81,94,141,155,181,78,34,228,42,42,41,	0,2642,2967,4288,9896,12062,13352,13658,14451,17943,21835,23439,24721,24875,42923,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	11881074	11882569	chr16:11881074-11882569	3	-	11881074	11881074	8553170	1	1495,	0,
#Partially deleted in new
chr16	11883014	11886961	chr16:11883014-11886961	0	-	11883014	11883014	8553170	4	81,94,141,185,	0,2166,3456,3762,
#Partially deleted in new
chr16	11887606	11915210	chr16:11887606-11915210	0	-	11887606	11915019	789624	7	144,78,34,228,42,42,222,	0,3455,7347,8951,10233,10387,27382,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	11890792	11895284	chr16:11890792-11895284	0	-	11890792	11890792	8553170	2	347,331,	0,4161,
#Partially deleted in new
chr16	11896615	11915203	chr16:11896615-11915203	0	-	11896615	11915019	789624	4	167,42,42,215,	0,1224,1378,18373,
#Deleted in new
chr16	11903922	11904137	chr16:11903922-11904137	7	-	11903922	11903922	16724991	1	215,	0,
#Partially deleted in new
chr16	11926198	11926307	chr16:11926198-11926307	7	+	11926198	11926198	16724991	1	109,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	11927372	11942045	chr16:11927372-11942045	3	-	11927372	11942045	789624	8	507,36,61,102,196,100,129,63,	0,1867,2012,3077,6144,6452,10167,14610,
#Deleted in new
chr16	11927594	11929343	chr16:11927594-11929343	0	-	11927594	11927594	8553170	2	285,104,	0,1645,
#Partially deleted in new
chr16	11927594	11942045	chr16:11927594-11942045	0	-	11927594	11942045	789624	8	285,36,61,102,145,100,129,63,	0,1645,1790,2855,5922,6230,9945,14388,
#Partially deleted in new
chr16	11928623	11941297	chr16:11928623-11941297	1	-	11929032	11941243	789624	6	652,61,145,100,129,129,	0,761,4893,5201,8916,12545,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	11928980	11929637	chr16:11928980-11929637	0	-	11928980	11928980	8553170	2	295,253,	0,404,
#Partially deleted in new
chr16	11930512	11976634	chr16:11930512-11976634	0	-	11930512	11933584	789624	6	39,145,100,129,277,67,	0,3004,3312,7027,11325,46055,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	11933622	11976643	chr16:11933622-11976643	0	-	11933622	11933622	8553170	6	39,100,129,94,136,76,	0,202,3917,22521,30268,42945,
#Partially deleted in new
chr16	11965106	11968068	chr16:11965106-11968068	3	+	11965324	11967847	0	3	348,147,499,	0,1088,2463,
#Partially deleted in new
chr16	11965212	11967995	chr16:11965212-11967995	1	+	11965324	11967847	0	2	242,426,	0,2357,
#Deleted in new
chr16	11968507	11968743	chr16:11968507-11968743	7	-	11968507	11968507	16724991	1	236,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	11976736	12042997	chr16:11976736-12042997	0	+	11976806	12029656	789624	6	77,62,53,125,122,101,	0,22560,26254,50583,52876,66160,
#Partially deleted in new
chr16	11976737	12574289	chr16:11976737-12574289	3	+	11976806	12568629	789624	21	76,62,53,125,181,71,249,376,119,76,83,64,129,83,104,117,56,82,141,140,5784,	0,22559,26253,50582,66159,69646,71634,75109,84790,92319,102095,149895,152892,222863,301195,379425,421708,426710,500981,547964,591768,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	11976744	12053284	chr16:11976744-12053284	0	+	11976744	11976744	8553170	8	69,62,53,125,181,71,249,1438,	0,22552,26246,50575,66152,69639,71627,75102,
#Partially deleted in new
chr16	11976850	11977850	chr16:11976850-11977850	3	-	11976850	11976850	8553170	2	186,415,	0,585,
#Partially deleted in new
chr16	12000324	12027733	chr16:12000324-12027733	0	+	12000324	12000324	8553170	3	169,53,414,	0,2666,26995,
#Partially deleted in new
chr16	12038709	12051868	chr16:12038709-12051868	0	+	12038709	12038709	8553170	5	78,181,71,249,22,	0,4187,7674,9662,13137,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	12052197	12135737	chr16:12052197-12135737	0	+	12052197	12135581	789624	7	25,119,76,83,64,129,187,	0,9330,16859,26635,74435,77432,83353,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	12081236	12081902	chr16:12081236-12081902	7	+	12081236	12081236	16724991	2	296,135,	0,531,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	12086745	12090302	chr16:12086745-12090302	3	-	12086745	12086745	8553170	2	1440,534,	0,3023,
#Partially deleted in new
chr16	12093626	12095307	chr16:12093626-12095307	3	-	12093626	12093626	8553170	2	265,237,	0,1444,
#Partially deleted in new
chr16	12129696	12527397	chr16:12129696-12527397	0	+	12129696	12526613	789624	9	62,83,104,117,56,82,141,140,848,	0,69904,148236,226466,268749,273751,348022,395005,396853,
#Deleted in new
chr16	12297196	12297323	chr16:12297196-12297323	3	-	12297196	12297196	8553170	1	127,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	12356252	12443365	chr16:12356252-12443365	0	+	12356252	12443039	789624	4	27,56,82,371,	0,42193,47195,86742,
#Partially deleted in new
chr16	12366981	12372582	chr16:12366981-12372582	3	-	12366981	12366981	8553170	2	488,51,	0,5550,
#Partially deleted in new
chr16	12372811	12373899	chr16:12372811-12373899	0	+	12372811	12372811	8553170	2	98,231,	0,857,
#Partially deleted in new
chr16	12372822	12373897	chr16:12372822-12373897	3	+	12372822	12372822	8553170	2	206,229,	0,846,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	12374354	12376032	chr16:12374354-12376032	3	+	12374354	12374354	8553170	1	1678,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	12545481	12546684	chr16:12545481-12546684	3	+	12545481	12545481	8553170	2	120,400,	0,803,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	12556352	12557694	chr16:12556352-12557694	3	-	12556352	12556352	8553170	2	187,376,	0,966,
#Partially deleted in new
chr16	12560755	12611044	chr16:12560755-12611044	3	-	12560755	12560755	8553170	2	391,307,	0,49982,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	12614450	12614852	chr16:12614450-12614852	3	+	12614450	12614450	8553170	1	402,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	12659798	12804017	chr16:12659798-12804017	3	-	12664885	12803776	789624	4	5317,426,219,311,	0,44825,121386,143908,
#Partially deleted in new
chr16	12663486	12803851	chr16:12663486-12803851	1	-	12664940	12803776	789624	3	1534,219,145,	0,117698,140220,
#Partially deleted in new
chr16	12663486	12803851	chr16:12663486-12803851	1	-	12664885	12803776	789624	3	1629,219,145,	0,117698,140220,
#Deleted in new
chr16	12720320	12720371	chr16:12720320-12720371	3	+	12720320	12720320	5263520	1	51,	0,
#Partially deleted in new
chr16	12745872	12757835	chr16:12745872-12757835	3	+	12745872	12745872	8553170	5	106,76,167,90,347,	0,7118,7348,7953,11616,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	12759281	12761162	chr16:12759281-12761162	3	+	12759281	12759281	8553170	2	134,793,	0,1088,
#Partially deleted in new
chr16	12780973	12803844	chr16:12780973-12803844	0	-	12780973	12780973	8553170	2	430,138,	0,22733,
#Deleted in new
chr16	12842486	12842610	chr16:12842486-12842610	3	-	12842486	12842486	8553170	1	124,	0,
#Deleted in new
chr16	12881169	12881493	chr16:12881169-12881493	7	+	12881169	12881169	16724991	1	324,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	12901619	13240413	chr16:12901619-13240413	3	+	12902064	13235409	789624	5	1008,128,156,48,5384,	0,15068,301774,311633,333410,
#Partially deleted in new
chr16	12901619	12916814	chr16:12901619-12916814	1	+	12902064	12916814	789624	2	1008,127,	0,15068,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	12901756	12911650	chr16:12901756-12911650	1	+	12902064	12908581	789624	2	871,3172,	0,6722,
#Partially deleted in new
chr16	12902878	12908910	chr16:12902878-12908910	0	+	12902878	12902878	8553170	2	124,432,	0,5600,
#Partially deleted in new
chr16	13082379	13235293	chr16:13082379-13235293	0	+	13082379	13082379	8553170	3	135,156,264,	0,121014,152650,
#Partially deleted in new
chr16	13197605	13204907	chr16:13197605-13204907	3	-	13197605	13197605	8553170	3	50,290,103,	0,5595,7199,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	13246315	13562918	chr16:13246315-13562918	3	+	13246315	13246315	8553170	5	75,103,242,132,212,	0,12017,103864,227894,316391,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	13331367	13332583	chr16:13331367-13332583	3	-	13331367	13331367	8553170	2	622,64,	0,1152,
#Partially deleted in new
chr16	13350554	13562912	chr16:13350554-13562912	0	+	13350554	13350554	8553170	3	62,132,206,	0,123655,212152,
#Deleted in new
chr16	13458325	13458698	chr16:13458325-13458698	7	+	13458325	13458325	16724991	1	373,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	13920156	13952345	chr16:13920156-13952345	3	+	13920165	13948347	0	11	216,181,196,208,181,129,111,598,93,113,4732,	0,1874,6404,7871,10553,12000,14035,14989,17609,24566,27457,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	13920156	13933247	chr16:13920156-13933247	1	+	13920165	13932302	0	6	216,181,196,208,181,1091,	0,1874,6404,7871,10553,12000,
#Deleted in new
chr16	13920190	13926801	chr16:13920190-13926801	0	+	13920190	13920190	8553170	3	182,181,241,	0,1840,6370,
#Deleted in new
chr16	13922331	13922679	chr16:13922331-13922679	7	-	13922331	13922331	16724991	1	348,	0,
#Partially deleted in new
chr16	13926551	13932239	chr16:13926551-13932239	0	+	13926551	13928143	789624	4	205,114,181,83,	0,1570,4158,5605,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	13927449	13930878	chr16:13927449-13930878	0	+	13927449	13927449	8553170	3	206,263,169,	0,523,3260,
#Partially deleted in new
chr16	13930676	13935635	chr16:13930676-13935635	3	-	13930676	13930676	8553170	2	177,219,	0,4740,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	13930676	13935610	chr16:13930676-13935610	1	-	13930676	13930676	8553170	1	4934,	0,
#Partially deleted in new
chr16	13932025	13948425	chr16:13932025-13948425	0	+	13932025	13932025	8553170	6	379,111,598,93,113,812,	0,2166,3120,5740,12697,15588,
#Deleted in new
chr16	13934021	13935387	chr16:13934021-13935387	0	+	13934021	13934021	8553170	2	281,242,	0,1124,
#Partially deleted in new
chr16	13937763	13948004	chr16:13937763-13948004	0	+	13937763	13943986	789624	4	95,122,113,391,	0,6210,6959,9850,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	13953154	13954825	chr16:13953154-13954825	3	+	13953154	13953154	8553170	2	268,314,	0,1357,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	14009279	14016016	chr16:14009279-14016016	3	-	14009279	14009279	789624	3	518,87,155,	0,4092,6582,
#Partially deleted in new
chr16	14013030	14016001	chr16:14013030-14016001	1	-	14013030	14013030	8553170	2	428,140,	0,2831,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	14018879	14021077	chr16:14018879-14021077	3	-	14018879	14018879	789624	3	586,154,145,	0,1454,2053,
#Partially deleted in new
chr16	14071320	14210298	chr16:14071320-14210298	0	+	14140606	14210298	789624	5	45,65,162,217,56,	0,7969,21400,69223,138922,
#Partially deleted in new
chr16	14071321	14266771	chr16:14071321-14266771	3	+	14140606	14261444	789624	17	44,65,217,66,56,76,162,179,138,248,133,1035,156,162,138,61,5863,	0,7968,69222,138921,141032,142223,145804,147498,162824,168915,174206,175151,177604,180540,181043,186779,189587,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	14071321	14144785	chr16:14071321-14144785	0	+	14071321	14071321	8553170	3	44,65,4242,	0,7968,69222,
#Partially deleted in new
chr16	14071338	14261448	chr16:14071338-14261448	1	+	14140606	14261444	789624	17	27,65,217,66,56,76,162,179,138,248,133,885,156,162,138,61,540,	0,7951,69205,138904,141015,142206,145787,147481,162807,168898,174189,175134,177587,180523,181026,186762,189570,
#Partially deleted in new
chr16	14071343	14149536	chr16:14071343-14149536	0	+	14071343	14071343	8553170	5	22,65,217,63,251,	0,7946,69200,77323,77942,
#Partially deleted in new
chr16	14079287	14266772	chr16:14079287-14266772	1	+	14140606	14261444	789624	16	67,217,66,56,76,162,179,138,248,133,885,156,162,138,61,5864,	0,61256,130955,133066,134257,137838,139532,154858,160949,166240,167185,169638,172574,173077,178813,181621,
#Partially deleted in new
chr16	14092836	14141529	chr16:14092836-14141529	0	+	14092836	14092836	8553170	3	46,217,223,	0,47707,48470,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	14140624	14170470	chr16:14140624-14170470	0	+	14140624	14170163	789624	2	136,330,	0,29516,
#Partially deleted in new
chr16	14140632	14214935	chr16:14140632-14214935	0	+	14140632	14140632	8553170	5	128,66,56,76,63,	0,69610,71721,72912,74240,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	14150832	14153235	chr16:14150832-14153235	3	+	14150832	14150832	8553170	1	2403,	0,
#Partially deleted in new
chr16	14186716	14241425	chr16:14186716-14241425	1	+	14186914	14240548	789624	8	319,66,56,76,162,179,138,1189,	0,23526,25637,26828,30409,32103,47429,53520,
#Partially deleted in new
chr16	14191819	14200277	chr16:14191819-14200277	3	-	14191819	14191819	8553170	3	85,97,233,	0,1856,8225,
#Partially deleted in new
chr16	14200329	14241468	chr16:14200329-14241468	1	+	14200487	14240825	789624	9	159,66,56,76,162,179,138,248,854,	0,9913,12024,13215,16796,18490,33816,39907,40285,
#Deleted in new
chr16	14200356	14200979	chr16:14200356-14200979	7	+	14200356	14200356	16724991	1	623,	0,
#Partially deleted in new
chr16	14247410	14266773	chr16:14247410-14266773	0	+	14247410	14247410	8553170	5	1671,162,138,61,5865,	0,4451,4954,10690,13498,
#Partially deleted in new
chr16	14258122	14262440	chr16:14258122-14262440	0	+	14258122	14261444	789624	3	39,594,63,	0,2786,4255,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	14275507	14275600	chr16:14275507-14275600	3	+	14275507	14275507	8553170	1	93,	0,
#Partially deleted in new
chr16	14301388	14326761	chr16:14301388-14326761	0	+	14301388	14301388	8553170	2	143,749,	0,24624,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	14302244	14328939	chr16:14302244-14328939	0	+	14302244	14302244	8553170	2	292,2927,	0,23768,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	14302287	14331067	chr16:14302287-14331067	1	+	14302287	14302287	8553170	2	310,5055,	0,23725,
#Partially deleted in new
chr16	14302691	14326510	chr16:14302691-14326510	0	+	14302691	14302691	8553170	2	121,498,	0,23321,
#Deleted in new
chr16	14303966	14304049	chr16:14303966-14304049	3	+	14303966	14303966	5263520	1	83,	0,
#Deleted in new
chr16	14309284	14309371	chr16:14309284-14309371	3	+	14309284	14309284	5263520	1	87,	0,
#Partially deleted in new
chr16	14322470	14326285	chr16:14322470-14326285	0	+	14322470	14322470	8553170	4	73,87,40,273,	0,826,3080,3542,
#Partially deleted in new
chr16	14322470	14326282	chr16:14322470-14326282	0	+	14322470	14322470	8553170	4	77,87,40,270,	0,826,3080,3542,
#Partially deleted in new
chr16	14322470	14326512	chr16:14322470-14326512	0	+	14322470	14322470	8553170	3	73,87,500,	0,826,3542,
#Partially deleted in new
chr16	14322470	14326510	chr16:14322470-14326510	0	+	14322470	14322470	8553170	2	77,498,	0,3542,
#Partially deleted in new
chr16	14322470	14326516	chr16:14322470-14326516	0	+	14322470	14322470	8553170	3	77,87,504,	0,826,3542,
#Partially deleted in new
chr16	14322470	14326285	chr16:14322470-14326285	1	+	14322470	14322470	8553170	3	77,159,273,	0,754,3542,
#Partially deleted in new
chr16	14322470	14326509	chr16:14322470-14326509	2	+	14322470	14322470	8553170	2	73,497,	0,3542,
#Partially deleted in new
chr16	14322475	14326285	chr16:14322475-14326285	0	+	14322475	14322475	8553170	2	75,273,	0,3537,
#Partially deleted in new
chr16	14322475	14326283	chr16:14322475-14326283	0	+	14322475	14322475	8553170	3	68,40,271,	0,3075,3537,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	14322475	14326284	chr16:14322475-14326284	0	+	14322475	14322475	8553170	4	68,94,87,272,	0,492,821,3537,
#Partially deleted in new
chr16	14322507	14326519	chr16:14322507-14326519	0	+	14322507	14322507	8553170	3	47,87,507,	0,789,3505,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	14322519	14326282	chr16:14322519-14326282	1	+	14322519	14322519	8553170	5	24,94,87,40,270,	0,448,777,3031,3493,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	14322519	14326285	chr16:14322519-14326285	0	+	14322519	14322519	8553170	4	28,94,87,273,	0,448,777,3493,
#Partially deleted in new
chr16	14363108	14370266	chr16:14363108-14370266	3	-	14363108	14363108	789624	2	187,331,	0,6827,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	14407667	14418862	chr16:14407667-14418862	3	-	14407667	14407667	8553170	5	552,160,225,99,229,	0,2571,3197,4889,10966,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	14408038	14418872	chr16:14408038-14418872	0	-	14408038	14408038	8553170	3	181,160,239,	0,2200,10595,
#Partially deleted in new
chr16	14435700	14630267	chr16:14435700-14630267	3	-	14436716	14630125	0	24	1072,194,190,75,87,56,70,111,76,43,44,78,57,81,43,39,66,166,61,82,68,80,78,161,	0,11187,46937,116320,118364,119953,145173,146480,148646,149048,150617,157600,164203,168445,170783,172580,173357,174943,181889,191405,191568,192471,193896,194406,
#Partially deleted in new
chr16	14436272	14630259	chr16:14436272-14630259	1	-	14436716	14630125	0	23	500,194,190,75,87,56,70,111,76,43,44,78,57,81,43,39,66,166,61,31,61,78,153,	0,10615,46365,115748,117792,119381,144601,145908,148074,148476,150045,157028,163631,167873,170211,172008,172785,174371,181317,190833,191918,193324,193834,
#Partially deleted in new
chr16	14436604	14630276	chr16:14436604-14630276	1	-	14436716	14627330	0	24	168,194,190,75,87,56,70,111,76,43,44,78,57,81,43,39,66,166,61,82,68,80,78,87,	0,10283,46033,115416,117460,119049,144269,145576,147742,148144,149713,156696,163299,167541,169879,171676,172453,174039,180985,190501,190664,191567,192992,193585,
#Partially deleted in new
chr16	14436667	14630238	chr16:14436667-14630238	1	-	14436716	14630125	0	17	105,194,190,75,87,56,70,111,76,43,44,78,57,81,80,78,132,	0,10220,45970,115353,117397,118986,144206,145513,147679,148081,149650,156633,163236,167478,191504,192929,193439,
#Partially deleted in new
chr16	14446956	14501689	chr16:14446956-14501689	0	-	14446956	14446956	8553170	3	125,190,137,	0,35681,54596,
#Partially deleted in new
chr16	14482637	14565075	chr16:14482637-14565075	0	-	14482637	14482637	8553170	5	190,75,87,56,60,	0,69383,71427,73016,82378,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	14555653	14592077	chr16:14555653-14592077	0	-	14555653	14555653	8553170	7	56,70,111,76,43,44,165,	0,25220,26527,28693,29095,30664,36259,
#Partially deleted in new
chr16	14555653	14610743	chr16:14555653-14610743	0	-	14555653	14610743	789624	12	56,70,111,76,43,44,78,57,43,39,66,100,	0,25220,26527,28693,29095,30664,37647,44250,50830,52627,53404,54990,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	14576071	14584791	chr16:14576071-14584791	0	-	14576071	14576071	8553170	5	205,70,111,76,43,	0,4802,6109,8275,8677,
#Partially deleted in new
chr16	14586317	14630260	chr16:14586317-14630260	0	-	14627166	14630125	789624	13	44,78,57,81,43,39,66,166,61,82,80,78,154,	0,6983,13586,17828,20166,21963,22740,24326,31272,40788,41854,43279,43789,
#Partially deleted in new
chr16	14599934	14630218	chr16:14599934-14630218	0	-	14604210	14630125	789624	11	26,81,39,66,166,61,31,68,80,78,112,	0,4211,8346,9123,10709,17655,27171,27334,28237,29662,30172,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	14601822	14602094	chr16:14601822-14602094	3	-	14601822	14601822	8553170	1	272,	0,
#Partially deleted in new
chr16	14608106	14610699	chr16:14608106-14610699	0	-	14608106	14608106	8553170	3	213,66,56,	0,951,2537,
#Partially deleted in new
chr16	14610664	14630251	chr16:14610664-14630251	0	-	14610664	14610664	8553170	6	145,82,68,80,78,145,	0,16441,16604,17507,18932,19442,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	14627175	14632728	chr16:14627175-14632728	0	-	14627175	14632480	789624	5	12,68,80,78,339,	0,93,996,2421,5214,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	14632814	14669236	chr16:14632814-14669236	3	+	14644346	14667827	789624	8	204,336,205,170,145,174,203,1602,	0,11459,15573,16989,22251,29077,32054,34820,
#Partially deleted in new
chr16	14632930	14668350	chr16:14632930-14668350	1	+	14644346	14667827	789624	6	88,336,145,174,203,716,	0,11343,22135,28961,31938,34704,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	14632930	14650556	chr16:14632930-14650556	0	+	14632930	14632930	8553170	3	88,336,753,	0,11343,16873,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	14632931	14650589	chr16:14632931-14650589	1	+	14644346	14649977	789624	4	87,336,205,786,	0,11342,15456,16872,
#Partially deleted in new
chr16	14632942	14655171	chr16:14632942-14655171	0	+	14632942	14632942	8553170	4	76,336,205,106,	0,11331,15445,22123,
#Partially deleted in new
chr16	14632973	14665019	chr16:14632973-14665019	0	+	14644346	14661898	789624	4	45,336,174,151,	0,11300,28918,31895,
#Partially deleted in new
chr16	14633162	14648452	chr16:14633162-14648452	0	+	14644346	14648452	789624	3	321,336,65,	0,11111,15225,
#Deleted in new
chr16	14643787	14643849	chr16:14643787-14643849	3	+	14643787	14643787	8553170	1	62,	0,
#Partially deleted in new
chr16	14644287	14668068	chr16:14644287-14668068	0	+	14644346	14649966	789624	6	322,170,145,174,203,434,	0,5516,10778,17604,20581,23347,
#Partially deleted in new
chr16	14648543	14667837	chr16:14648543-14667837	0	+	14648543	14667827	789624	4	49,174,203,203,	0,13348,16325,19091,
#Partially deleted in new
chr16	14661963	14665181	chr16:14661963-14665181	0	+	14661963	14665075	789624	2	102,313,	0,2905,
#Partially deleted in new
chr16	14662029	14669231	chr16:14662029-14669231	0	+	14662029	14669087	789624	3	36,203,199,	0,2839,7003,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	14667319	14669232	chr16:14667319-14669232	0	+	14667319	14667319	8553170	2	573,200,	0,1713,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	14672544	14694669	chr16:14672544-14694669	3	-	14672606	14694229	0	4	205,107,151,537,	0,15620,17950,21588,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	14695566	14707055	chr16:14695566-14707055	3	-	14695566	14695566	8553170	3	399,82,98,	0,6207,11391,
#Partially deleted in new
chr16	14708943	14724778	chr16:14708943-14724778	1	+	14708943	14724778	789624	7	120,129,100,145,108,61,291,	0,7124,10883,11146,14248,15374,15544,
#Partially deleted in new
chr16	14708943	14726338	chr16:14708943-14726338	3	+	14708943	14726293	789624	8	120,129,100,145,108,61,36,456,	0,7124,10883,11146,14248,15374,15544,16939,
#Partially deleted in new
chr16	14711688	14726293	chr16:14711688-14726293	1	+	14711688	14726293	789624	8	63,129,100,145,108,61,36,411,	0,4379,8138,8401,11503,12629,12799,14194,
#Partially deleted in new
chr16	14727281	14733347	chr16:14727281-14733347	7	-	14727281	14727281	16724991	3	107,151,97,	0,2330,5969,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	14734684	14746177	chr16:14734684-14746177	3	-	14734684	14734684	8553170	3	399,82,98,	0,6207,11395,
#Partially deleted in new
chr16	14748065	14765413	chr16:14748065-14765413	3	+	14748065	14765413	789624	8	120,129,100,145,108,61,36,411,	0,7126,10881,11144,14246,15372,15542,16937,
#Partially deleted in new
chr16	14748065	14763898	chr16:14748065-14763898	1	+	14748065	14763898	789624	7	120,129,100,145,108,61,291,	0,7126,10881,11144,14246,15372,15542,
#Partially deleted in new
chr16	14750812	14765413	chr16:14750812-14765413	1	+	14750812	14765413	789624	8	63,129,100,145,108,61,36,411,	0,4379,8134,8397,11499,12625,12795,14190,
#Partially deleted in new
chr16	14766401	14770075	chr16:14766401-14770075	7	-	14766401	14766401	16724991	2	107,151,	0,3523,
#Partially deleted in new
chr16	14820791	14824669	chr16:14820791-14824669	7	-	14820791	14820791	16724991	5	129,126,116,183,36,	0,268,719,2094,3842,
#Partially deleted in new
chr16	14822431	14824702	chr16:14822431-14824702	5	-	14822431	14822431	16724991	2	637,69,	0,2202,
#Partially deleted in new
chr16	14833680	14896160	chr16:14833680-14896160	3	+	14833851	14895645	789624	31	336,90,46,101,107,73,153,138,90,106,151,175,142,132,137,88,64,96,219,83,160,127,114,128,142,84,111,102,120,93,647,	0,4726,7681,10993,12896,15218,18749,19786,20256,23536,23824,29332,30904,31343,32874,34867,37940,38553,41355,41659,42678,42983,45040,46334,47863,48913,50691,53080,55415,61317,61833,
#Partially deleted in new
chr16	14833779	14896156	chr16:14833779-14896156	1	+	14833851	14896111	789624	32	237,90,46,101,107,73,153,138,90,106,151,175,142,132,137,88,64,96,219,83,160,127,114,128,142,84,111,102,120,93,128,184,	0,4627,7582,10894,12797,15119,18650,19687,20157,23437,23725,29233,30805,31244,32775,34768,37841,38454,41256,41560,42579,42884,44941,46235,47764,48814,50592,52981,55316,61218,61734,62193,
#Partially deleted in new
chr16	14833817	14896145	chr16:14833817-14896145	1	+	14844766	14896111	789624	31	199,90,46,101,73,153,138,90,106,151,175,142,132,137,88,64,96,219,83,160,127,114,128,142,84,111,102,120,93,128,173,	0,4589,7544,10856,15081,18612,19649,20119,23399,23687,29195,30767,31206,32737,34730,37803,38416,41218,41522,42541,42846,44903,46197,47726,48776,50554,52943,55278,61180,61696,62155,
#Partially deleted in new
chr16	14848520	14853604	chr16:14848520-14853604	0	+	14848520	14848520	8553170	4	184,73,153,138,	0,378,3909,4946,
#Partially deleted in new
chr16	14853053	14863060	chr16:14853053-14863060	0	+	14853053	14853053	8553170	6	27,138,90,106,151,48,	0,413,883,4163,4451,9959,
#Partially deleted in new
chr16	14853255	14857551	chr16:14853255-14857551	0	+	14853255	14853255	8553170	4	349,90,106,47,	0,681,3961,4249,
#Deleted in new
chr16	14862379	14862749	chr16:14862379-14862749	7	-	14862379	14862379	16724991	1	370,	0,
#Partially deleted in new
chr16	14886774	14896156	chr16:14886774-14896156	0	+	14886774	14895645	789624	5	88,120,93,181,184,	0,2321,8223,8739,9198,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	14888053	14896156	chr16:14888053-14896156	0	+	14888053	14888053	8553170	3	1162,93,643,	0,6944,7460,
#Deleted in new
chr16	14901498	14902174	chr16:14901498-14902174	3	+	14901498	14901498	8553170	1	676,	0,
#Deleted in new
chr16	14901507	14901591	chr16:14901507-14901591	3	+	14901507	14901507	5263520	1	84,	0,
#Deleted in new
chr16	14907716	14907781	chr16:14907716-14907781	3	+	14907716	14907716	5263520	1	65,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	14909886	14911345	chr16:14909886-14911345	3	-	14909886	14909886	8553170	1	1459,	0,
#Deleted in new
chr16	14911219	14911313	chr16:14911219-14911313	3	+	14911219	14911219	5263520	1	94,	0,
#Partially deleted in new
chr16	14911550	14935708	chr16:14911550-14935708	7	+	14911550	14911550	16724991	31	357,72,72,170,672,184,221,116,127,248,756,132,176,134,144,280,214,160,153,145,781,157,253,196,171,144,211,127,117,53,87,	0,5989,6182,6522,6904,7694,8312,8721,9247,9729,10450,12104,12426,12954,14182,14453,14826,15106,15656,16830,17700,18615,18952,19329,21020,21277,21515,21816,23609,23794,24071,
#Deleted in new
chr16	14915456	14915556	chr16:14915456-14915556	3	-	14915456	14915456	8553170	1	100,	0,
#Deleted in new
chr16	14920335	14922087	chr16:14920335-14922087	4	+	14920335	14920335	16724991	4	52,127,248,87,	0,462,944,1665,
#Partially deleted in new
chr16	14922801	14952060	chr16:14922801-14952060	0	+	14922801	14922801	8553170	28	348,132,176,134,144,280,214,160,153,145,781,157,253,196,171,144,211,127,238,86,129,100,145,108,61,36,70,446,	0,853,1175,1703,2931,3202,3575,3855,4405,5579,6449,7364,7701,8078,9769,10026,10264,10565,12358,14763,19010,22772,23035,26128,27248,27418,27950,28813,
#Deleted in new
chr16	14925936	14926003	chr16:14925936-14926003	3	+	14925936	14925936	5263520	1	67,	0,
#Partially deleted in new
chr16	14927282	14951874	chr16:14927282-14951874	0	+	14927282	14927282	8553170	20	77,145,171,157,253,196,171,144,211,127,117,53,86,129,100,145,108,61,36,260,	0,1098,1968,2883,3220,3597,5288,5545,5783,6084,7877,8062,10282,14529,18291,18554,21647,22767,22937,24332,
#Deleted in new
chr16	14930819	14930879	chr16:14930819-14930879	3	+	14930819	14930819	5263520	1	60,	0,
#Partially deleted in new
chr16	14937413	14945923	chr16:14937413-14945923	0	+	14937413	14937413	8553170	4	237,129,100,87,	0,4398,8160,8423,
#Partially deleted in new
chr16	14937442	14952056	chr16:14937442-14952056	3	+	14937442	14952025	789624	8	63,129,100,145,108,61,36,442,	0,4369,8131,8394,11487,12607,12777,14172,
#Partially deleted in new
chr16	14938214	14950080	chr16:14938214-14950080	0	+	14938214	14950080	789624	6	144,129,100,145,108,31,	0,3597,7359,7622,10715,11835,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	14941518	14945873	chr16:14941518-14945873	0	+	14941518	14941518	8553170	3	422,100,37,	0,4055,4318,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	14941819	14950700	chr16:14941819-14950700	0	+	14941819	14941819	8553170	6	121,100,145,1007,61,481,	0,3754,4017,7110,8230,8400,
#Partially deleted in new
chr16	14945884	14950521	chr16:14945884-14950521	0	+	14945884	14950510	789624	4	97,108,61,302,	0,3045,4165,4335,
#Partially deleted in new
chr16	14953011	14953120	chr16:14953011-14953120	7	-	14953011	14953011	16724991	1	109,	0,
#Partially deleted in new
chr16	14974590	15036678	chr16:14974590-15036678	1	+	14974729	15036275	789624	23	214,74,66,81,147,190,69,79,85,49,102,126,51,64,89,106,172,119,122,93,97,105,663,	0,23162,23749,27185,29596,31803,34188,35090,41538,42529,42730,44249,48113,52052,54287,55360,57144,58270,58687,59695,59866,60858,61425,
#Partially deleted in new
chr16	14974736	15006424	chr16:14974736-15006424	0	+	14974736	15006424	789624	7	68,87,74,66,81,147,31,	0,150,23016,23603,27039,29450,31657,
#Partially deleted in new
chr16	14974802	15006410	chr16:14974802-15006410	0	+	14997776	15006410	789624	6	171,74,66,81,147,17,	0,22950,23537,26973,29384,31591,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr16	14975011	15139339	chr16:14975011-15139339	1	+	14975199	15138976	789624	17	209,74,66,81,147,190,69,79,85,49,102,126,51,64,89,106,461,	0,22741,23328,26764,29175,31382,33767,34669,41117,42108,42309,43828,47692,51631,53866,54939,163867,
#Partially deleted in new
chr16	14975030	14998362	chr16:14975030-14998362	0	+	14997776	14998362	789624	3	190,70,23,	0,22726,23309,
#Partially deleted in new
chr16	14975079	15029805	chr16:14975079-15029805	1	+	14975199	15029032	789624	14	141,74,66,81,147,190,79,85,49,102,126,51,64,928,	0,22673,23260,26696,29107,31314,34601,41049,42040,42241,43760,47624,51563,53798,
#Partially deleted in new
chr16	14975088	15036197	chr16:14975088-15036197	0	+	14975199	15033298	789624	9	132,74,66,13,122,93,97,105,182,	0,22664,23251,26687,58189,59197,59368,60360,60927,
#Partially deleted in new
chr16	14975102	15038332	chr16:14975102-15038332	3	+	14975199	15036275	789624	23	118,74,66,81,147,190,69,79,85,49,102,126,51,64,89,106,172,119,122,93,97,105,2317,	0,22650,23237,26673,29084,31291,33676,34578,41026,42017,42218,43737,47601,51540,53775,54848,56632,57758,58175,59183,59354,60346,60913,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr16	14975104	15037687	chr16:14975104-15037687	0	+	14975104	14975104	8553170	22	116,74,66,81,147,190,69,79,85,49,102,126,51,64,89,106,1245,122,93,97,105,1672,	0,22648,23235,26671,29082,31289,33674,34576,41024,42015,42216,43735,47599,51538,53773,54846,56630,58173,59181,59352,60344,60911,
#Partially deleted in new
chr16	14975122	15037687	chr16:14975122-15037687	1	+	14975199	15036275	789624	22	98,74,66,147,190,69,79,85,49,102,126,51,64,89,106,172,119,122,93,97,105,1672,	0,22630,23217,29064,31271,33656,34558,41006,41997,42198,43717,47581,51520,53755,54828,56612,57738,58155,59163,59334,60326,60893,
#Partially deleted in new
chr16	14975128	15036604	chr16:14975128-15036604	1	+	14975199	15036275	789624	22	92,74,63,147,190,69,79,85,49,102,126,51,64,89,106,172,119,122,93,97,105,589,	0,22624,23214,29058,31265,33650,34552,41000,41991,42192,43711,47575,51514,53749,54822,56606,57732,58149,59157,59328,60320,60887,
#Partially deleted in new
chr16	14975151	15008840	chr16:14975151-15008840	0	+	14975199	15001860	789624	7	69,74,66,112,147,190,62,	0,22601,23188,26624,29035,31242,33627,
#Partially deleted in new
chr16	14975199	15022728	chr16:14975199-15022728	1	+	14975199	15022728	789624	14	21,74,66,81,147,190,69,79,85,49,102,126,15,9,	0,22553,23140,26576,28987,31194,33579,34481,40929,41920,42121,43640,47504,47520,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	14976762	15017387	chr16:14976762-15017387	0	+	14997776	15017387	789624	10	142,74,66,81,147,190,79,85,49,67,	0,20990,21577,25013,27424,29631,32918,39366,40357,40558,
#Deleted in new
chr16	14988258	14990160	chr16:14988258-14990160	7	-	14988258	14988258	16724991	1	1902,	0,
#Partially deleted in new
chr16	14997747	15038323	chr16:14997747-15038323	1	+	14997776	15036275	789624	20	79,66,190,69,79,85,49,102,126,51,64,89,106,172,119,122,93,97,105,2308,	0,592,8646,11031,11933,18381,19372,19573,21092,24956,28895,31130,32203,33987,35113,35530,36538,36709,37701,38268,
#Partially deleted in new
chr16	15009310	15017153	chr16:15009310-15017153	0	+	15009310	15009310	8553170	3	449,85,34,	0,6818,7809,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	15010320	15010397	chr16:15010320-15010397	3	-	15010320	15010320	5263520	1	77,	0,
#Deleted in new
chr16	15015827	15016390	chr16:15015827-15016390	3	-	15015827	15015827	8553170	1	563,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	15025223	15032653	chr16:15025223-15032653	0	+	15025223	15025223	8553170	4	1483,89,106,919,	0,3654,4727,6511,
#Deleted in new
chr16	15034091	15036087	chr16:15034091-15036087	0	+	15034091	15034091	8553170	4	287,97,105,72,	0,365,1357,1924,
#Partially deleted in new
chr16	15037852	15056064	chr16:15037852-15056064	3	-	15038030	15055971	789624	10	358,114,98,54,54,74,109,66,103,174,	0,721,2116,3215,3770,6481,9589,10002,10144,18038,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	15037853	15046054	chr16:15037853-15046054	0	-	15037853	15037853	8553170	6	357,114,98,54,54,1721,	0,720,2115,3214,3769,6480,
#Partially deleted in new
chr16	15037853	15056079	chr16:15037853-15056079	1	-	15038030	15047485	789624	8	357,114,98,54,54,74,109,189,	0,720,2115,3214,3769,6480,9588,18037,
#Partially deleted in new
chr16	15037853	15056079	chr16:15037853-15056079	1	-	15038030	15047485	789624	9	357,114,98,54,54,74,109,66,189,	0,720,2115,3214,3769,6480,9588,10001,18037,
#Partially deleted in new
chr16	15037873	15056027	chr16:15037873-15056027	0	-	15047863	15055971	789624	9	337,114,98,54,54,74,109,66,137,	0,700,2095,3194,3749,6460,9568,9981,18017,
#Partially deleted in new
chr16	15038144	15047494	chr16:15038144-15047494	0	-	15041672	15047494	789624	6	66,114,98,54,54,53,	0,429,1824,2923,3478,9297,
#Partially deleted in new
chr16	15038573	15056054	chr16:15038573-15056054	0	-	15038573	15047485	789624	7	114,98,54,54,74,109,164,	0,1395,2494,3049,5760,8868,17317,
#Partially deleted in new
chr16	15038575	15056039	chr16:15038575-15056039	0	-	15038575	15055971	789624	9	112,98,54,54,74,109,66,22,149,	0,1393,2492,3047,5758,8866,9279,9502,17315,
#Partially deleted in new
chr16	15038607	15040467	chr16:15038607-15040467	0	-	15038607	15038607	8553170	2	80,499,	0,1361,
#Partially deleted in new
chr16	15041622	15055917	chr16:15041622-15055917	0	-	15047863	15055917	789624	5	54,74,133,66,27,	0,2711,5795,6232,14268,
#Partially deleted in new
chr16	15047215	15055943	chr16:15047215-15055943	0	-	15047215	15047215	8553170	3	335,66,53,	0,639,8675,
#Partially deleted in new
chr16	15047427	15055787	chr16:15047427-15055787	0	-	15047427	15047427	8553170	4	123,66,103,47,	0,427,569,8313,
#Partially deleted in new
chr16	15060021	15094317	chr16:15060021-15094317	3	-	15061743	15094233	789624	18	1884,88,153,109,185,131,131,139,93,99,70,64,60,130,90,57,106,173,	0,3174,5197,8147,10048,11099,12928,14701,16536,19976,23491,24620,25617,26107,26343,31293,32487,34123,
#Partially deleted in new
chr16	15060034	15094311	chr16:15060034-15094311	1	-	15060167	15094233	789624	19	139,117,88,153,109,185,131,131,139,93,99,70,64,60,130,90,57,106,167,	0,1754,3161,5184,8134,10035,11086,12915,14688,16523,19963,23478,24607,25604,26094,26330,31280,32474,34110,
#Partially deleted in new
chr16	15061427	15094249	chr16:15061427-15094249	1	-	15061743	15094233	789624	17	478,88,153,109,185,131,131,139,93,99,70,64,60,130,57,106,105,	0,1768,3791,6741,8642,9693,11522,13295,15130,18570,22085,23214,24211,24701,29887,31081,32717,
#Partially deleted in new
chr16	15061628	15094008	chr16:15061628-15094008	1	-	15061743	15092604	789624	18	277,88,153,109,185,131,131,139,93,99,70,64,60,130,90,57,106,57,	0,1567,3590,6540,8441,9492,11321,13094,14929,18369,21884,23013,24010,24500,24736,29686,30880,32323,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	15074676	15083750	chr16:15074676-15083750	0	-	15074676	15074676	8553170	4	185,93,99,238,	0,1881,5321,8836,
#Partially deleted in new
chr16	15076434	15094253	chr16:15076434-15094253	1	-	15076497	15094233	789624	10	216,99,70,64,60,130,90,57,106,109,	0,3563,7078,8207,9204,9694,9930,14880,16074,17710,
#Partially deleted in new
chr16	15094410	15109197	chr16:15094410-15109197	7	+	15094410	15094410	16724991	4	401,221,206,1770,	0,8724,12551,13017,
#Deleted in new
chr16	15103134	15103355	chr16:15103134-15103355	5	+	15103134	15103134	16724991	1	221,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	15104311	15121902	chr16:15104311-15121902	5	-	15104311	15104311	16724991	9	447,36,61,108,145,100,129,129,59,	0,1803,1948,3018,6102,6410,10131,14614,17532,
#Partially deleted in new
chr16	15104329	15123498	chr16:15104329-15123498	5	-	15104329	15104329	16724991	8	429,36,61,108,145,100,129,63,	0,1785,1930,3000,6084,6392,10113,19106,
#Partially deleted in new
chr16	15104722	15131601	chr16:15104722-15131601	3	-	15104722	15104722	789624	18	36,270,36,61,108,145,100,129,129,117,127,211,144,168,196,253,157,515,	0,826,1392,1537,2607,5691,5999,9720,14203,20968,22747,22964,23269,23499,25159,25479,25912,26364,
#Partially deleted in new
chr16	15110501	15119214	chr16:15110501-15119214	6	-	15110501	15110501	16724991	4	57,100,129,289,	0,220,3941,8424,
#Partially deleted in new
chr16	15110790	15125948	chr16:15110790-15125948	0	-	15110790	15110790	8553170	4	31,129,129,258,	0,3652,8135,14900,
#Partially deleted in new
chr16	15125241	15154564	chr16:15125241-15154564	5	-	15125241	15125241	16724991	24	84,50,117,127,211,144,168,196,253,157,621,153,160,214,280,144,150,158,184,667,174,72,70,215,	0,309,449,2228,2445,2750,2980,4640,4960,5393,5845,7479,8022,8248,8553,8960,10038,10732,11325,11627,12508,12950,13143,29108,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	15126658	15131499	chr16:15126658-15131499	4	-	15126658	15126658	16724991	8	938,211,144,168,196,253,157,426,	0,1028,1333,1563,3223,3543,3976,4415,
#Deleted in new
chr16	15132719	15133845	chr16:15132719-15133845	4	-	15132719	15132719	16724991	4	154,160,214,51,	0,544,770,1075,
#Deleted in new
chr16	15132842	15133857	chr16:15132842-15133857	4	-	15132842	15132842	16724991	4	219,160,214,63,	0,421,647,952,
#Deleted in new
chr16	15133487	15135153	chr16:15133487-15135153	4	-	15133487	15133487	16724991	4	216,280,144,124,	0,307,714,1542,
#Deleted in new
chr16	15134074	15134145	chr16:15134074-15134145	3	-	15134074	15134074	5263520	1	71,	0,
#Deleted in new
chr16	15135303	15137156	chr16:15135303-15137156	6	-	15135303	15135303	16724991	4	126,107,184,288,	0,345,1263,1565,
#Partially deleted in new
chr16	15150696	15150796	chr16:15150696-15150796	3	+	15150696	15150696	8553170	1	100,	0,
#Partially deleted in new
chr16	15154849	15155002	chr16:15154849-15155002	3	-	15154849	15154849	5263520	1	153,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	15154902	15157020	chr16:15154902-15157020	3	+	15154902	15154902	8553170	1	2118,	0,
#Partially deleted in new
chr16	15358977	15362674	chr16:15358977-15362674	7	+	15358977	15358977	16724991	2	152,111,	0,3586,
#Partially deleted in new
chr16	15363623	15378294	chr16:15363623-15378294	1	-	15363658	15378294	789624	8	446,36,61,108,145,100,129,63,	0,1805,1950,3029,6088,6396,10091,14608,
#Partially deleted in new
chr16	15364875	15378294	chr16:15364875-15378294	1	-	15364875	15378294	789624	8	57,36,61,108,145,100,129,63,	0,553,698,1777,4836,5144,8839,13356,
#Partially deleted in new
chr16	15365173	15381047	chr16:15365173-15381047	3	-	15365173	15381047	789624	7	291,61,108,145,100,129,120,	0,400,1479,4538,4846,8541,15754,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	15395753	15413268	chr16:15395753-15413268	1	+	15395897	15408036	789624	3	454,30,5336,	0,12070,12179,
#Partially deleted in new
chr16	15395753	15515348	chr16:15395753-15515348	0	+	15395897	15515348	789624	2	454,44,	0,119551,
#Partially deleted in new
chr16	15395778	15408439	chr16:15395778-15408439	3	+	15395897	15408112	789624	4	429,71,30,507,	0,5008,12045,12154,
#Partially deleted in new
chr16	15395949	15515333	chr16:15395949-15515333	3	+	15395949	15434498	789624	3	258,365,29,	0,38445,119355,
#Partially deleted in new
chr16	15434294	15588259	chr16:15434294-15588259	3	+	15434653	15586829	789624	6	465,124,74,115,83,1543,	0,81010,133688,146922,148861,152422,
#Partially deleted in new
chr16	15434474	15587972	chr16:15434474-15587972	1	+	15434653	15586753	789624	5	285,124,74,115,1256,	0,80830,133508,146742,152242,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	15434567	15583238	chr16:15434567-15583238	0	+	15434653	15533023	789624	6	192,124,149,74,115,83,	0,80737,98419,133415,146649,148588,
#Partially deleted in new
chr16	15434587	15581392	chr16:15434587-15581392	0	+	15434587	15434587	8553170	4	172,124,74,176,	0,80717,133395,146629,
#Partially deleted in new
chr16	15502265	15588074	chr16:15502265-15588074	1	+	15502321	15586829	789624	6	111,124,74,115,83,1358,	0,13039,65717,78951,80890,84451,
#Partially deleted in new
chr16	15515304	15587964	chr16:15515304-15587964	0	+	15515304	15587626	789624	5	124,74,115,83,469,	0,52678,65912,67851,72191,
#Partially deleted in new
chr16	15515342	15584182	chr16:15515342-15584182	1	+	15515342	15584053	789624	5	86,74,115,83,176,	0,52640,65874,67813,68664,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	15533042	15536948	chr16:15533042-15536948	0	+	15533042	15533042	8553170	2	93,369,	0,3537,
#Partially deleted in new
chr16	15567982	15625028	chr16:15567982-15625028	0	+	15567982	15591103	789624	5	74,115,83,86,139,	0,13234,15173,23047,56907,
#Partially deleted in new
chr16	15594385	15643166	chr16:15594385-15643166	3	-	15596692	15639233	0	27	2552,171,126,61,213,231,228,203,134,143,221,176,120,237,81,179,190,159,158,429,173,118,227,175,687,202,149,	0,4468,6042,6255,7605,9782,13905,15137,16589,17206,18171,21444,22666,22913,26065,27347,28548,30383,30630,30986,35946,36995,39231,40371,41270,44704,48632,
#Partially deleted in new
chr16	15594386	15643024	chr16:15594386-15643024	1	-	15596692	15639233	789624	26	2551,171,126,61,213,231,228,203,134,143,221,176,120,237,81,179,124,159,158,173,118,227,175,687,202,7,	0,4467,6041,6254,7604,9781,13904,15136,16588,17205,18170,21443,22665,22912,26064,27346,28547,30382,30629,35945,36994,39230,40370,41269,44703,48631,
#Partially deleted in new
chr16	15594387	15601863	chr16:15594387-15601863	0	-	15594387	15594387	8553170	3	2550,171,1436,	0,4466,6040,
#Partially deleted in new
chr16	15596170	15643108	chr16:15596170-15643108	1	-	15596692	15639233	0	27	767,171,126,61,213,231,228,203,134,143,221,176,120,237,81,179,190,159,158,429,173,118,218,175,687,202,91,	0,2683,4257,4470,5820,7997,12120,13352,14804,15421,16386,19659,20881,21128,24280,25562,26763,28598,28845,29201,34161,35210,37446,38586,39485,42919,46847,
#Partially deleted in new
chr16	15596170	15643108	chr16:15596170-15643108	1	-	15596692	15639233	0	27	767,171,126,61,213,231,228,203,134,143,221,176,120,237,81,179,193,159,158,426,173,118,227,175,687,202,91,	0,2683,4257,4470,5820,7997,12120,13352,14804,15421,16386,19659,20881,21128,24280,25562,26763,28598,28845,29201,34161,35210,37446,38586,39485,42919,46847,
#Partially deleted in new
chr16	15596634	15600460	chr16:15596634-15600460	0	-	15599091	15600460	789624	3	303,264,33,	0,2219,3793,
#Partially deleted in new
chr16	15596692	15639233	chr16:15596692-15639233	0	-	15612740	15639233	789624	25	245,171,126,61,213,231,228,203,134,143,221,120,237,81,179,190,159,158,429,173,118,227,175,687,144,	0,2161,3735,3948,5298,7475,11598,12830,14282,14899,15864,20359,20606,23758,25040,26241,28076,28323,28679,33639,34688,36924,38064,38963,42397,
#Deleted in new
chr16	15596766	15599171	chr16:15596766-15599171	0	-	15596766	15596766	8553170	2	171,318,	0,2087,
#Partially deleted in new
chr16	15598921	15600979	chr16:15598921-15600979	0	-	15598921	15598921	8553170	3	103,126,339,	0,1506,1719,
#Partially deleted in new
chr16	15602127	15606114	chr16:15602127-15606114	0	-	15602127	15602127	8553170	3	76,231,267,	0,2040,3720,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	15608473	15610563	chr16:15608473-15610563	3	+	15608473	15608473	8553170	2	266,264,	0,1826,
#Deleted in new
chr16	15611029	15611095	chr16:15611029-15611095	3	-	15611029	15611029	5263520	1	66,	0,
#Partially deleted in new
chr16	15612705	15617365	chr16:15612705-15617365	0	-	15612705	15612705	8553170	3	72,176,314,	0,3124,4346,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	15616784	15623150	chr16:15616784-15623150	0	-	15616784	15616784	8553170	5	387,237,81,179,217,	0,514,3666,4948,6149,
#Partially deleted in new
chr16	15621492	15623082	chr16:15621492-15623082	0	-	15621492	15621492	8553170	2	419,149,	0,1441,
#Partially deleted in new
chr16	15630233	15643142	chr16:15630233-15643142	0	-	15630233	15630233	8553170	6	271,118,227,1586,202,125,	0,1147,3383,4523,8856,12784,
#Partially deleted in new
chr16	15635993	15642488	chr16:15635993-15642488	0	-	15635993	15639233	789624	3	349,202,30,	0,3096,6465,
#Deleted in new
chr16	15643293	15643372	chr16:15643293-15643372	3	+	15643293	15643293	5263520	1	79,	0,
#Partially deleted in new
chr16	15650226	15726353	chr16:15650226-15726353	1	+	15664778	15724251	789624	9	68,126,154,149,137,180,92,152,2163,	0,14509,17059,27574,37148,40917,43938,46482,73964,
#Partially deleted in new
chr16	15650256	15691219	chr16:15650256-15691219	0	+	15664778	15677811	789624	7	38,126,154,82,149,137,76,	0,14479,17029,22433,27544,37118,40887,
#Partially deleted in new
chr16	15672662	15687468	chr16:15672662-15687468	0	+	15672662	15672662	8553170	3	109,149,94,	0,5138,14712,
#Partially deleted in new
chr16	15677924	15696766	chr16:15677924-15696766	0	+	15677924	15696766	789624	6	25,137,180,92,83,58,	0,9450,13219,16240,17983,18784,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	15683289	15684570	chr16:15683289-15684570	3	+	15683289	15683289	8553170	2	99,404,	0,877,
#Partially deleted in new
chr16	15687426	15699930	chr16:15687426-15699930	0	+	15687426	15699609	789624	5	85,180,92,152,334,	0,3717,6738,9282,12170,
#Partially deleted in new
chr16	15691162	15724222	chr16:15691162-15724222	0	+	15691162	15724222	789624	4	161,92,126,32,	0,3002,8566,33028,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	15691199	15700491	chr16:15691199-15700491	0	+	15691199	15699822	789624	4	124,92,152,763,	0,2965,5509,8529,
#Partially deleted in new
chr16	15691241	15724222	chr16:15691241-15724222	0	+	15691241	15699822	789624	5	82,92,152,126,32,	0,2923,5467,8487,32949,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	15701236	15702118	chr16:15701236-15702118	3	+	15701236	15701236	8553170	1	882,	0,
#Boundary problem: need 42, got 0, diff 42, mapped 0.0
chr16	15703171	15857011	chr16:15703171-15857011	1	-	15703990	15838252	789624	42	952,173,109,209,124,89,129,162,213,213,249,153,105,207,145,213,172,124,138,207,132,109,161,70,122,194,115,174,174,153,119,96,144,99,64,93,21,103,28,157,362,71,	0,11737,11992,13968,15143,16048,16413,16979,17667,18250,20989,21475,21716,23676,29392,32194,34277,35393,36879,38291,38588,41957,44398,44702,44875,46966,50222,53169,54655,56404,57368,60624,68397,72906,75608,79213,81526,83458,95488,120083,134736,153769,
#Boundary problem: need 43, got 0, diff 43, mapped 0.0
chr16	15703171	15857011	chr16:15703171-15857011	1	-	15708810	15838252	789624	43	952,39,173,109,209,124,89,129,162,213,213,249,153,105,207,145,213,172,124,138,207,132,109,161,70,122,194,115,174,174,153,119,96,144,99,64,93,21,103,28,157,362,71,	0,5631,11737,11992,13968,15143,16048,16413,16979,17667,18250,20989,21475,21716,23676,29392,32194,34277,35393,36879,38291,38588,41957,44398,44702,44875,46966,50222,53169,54655,56404,57368,60624,68397,72906,75608,79213,81526,83458,95488,120083,134736,153769,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	15703740	15711270	chr16:15703740-15711270	0	-	15703740	15703740	8553170	2	383,158,	0,7372,
#Boundary problem: need 42, got 0, diff 42, mapped 0.0
chr16	15703786	15857033	chr16:15703786-15857033	1	-	15708810	15838252	789624	42	337,39,173,109,209,124,89,129,162,213,213,249,153,105,207,145,213,172,124,138,207,132,109,161,70,122,194,115,174,174,153,119,96,144,99,64,93,103,28,157,362,93,	0,5016,11122,11377,13353,14528,15433,15798,16364,17052,17635,20374,20860,21101,23061,28777,31579,33662,34778,36264,37676,37973,41342,43783,44087,44260,46351,49607,52554,54040,55789,56753,60009,67782,72291,74993,78598,82843,94873,119468,134121,153154,
#Partially deleted in new
chr16	15703990	15857033	chr16:15703990-15857033	3	-	15703990	15838252	789624	41	133,173,109,209,124,89,129,162,213,213,249,153,105,207,145,213,172,124,138,207,132,109,161,70,122,194,115,174,174,153,119,96,144,99,64,93,103,28,157,362,93,	0,10918,11173,13149,14324,15229,15594,16160,16848,17431,20170,20656,20897,22857,28573,31375,33458,34574,36060,37472,37769,41138,43579,43883,44056,46147,49403,52350,53836,55585,56549,59805,67578,72087,74789,78394,82639,94669,119264,133917,152950,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	15712889	15724328	chr16:15712889-15724328	0	-	15712889	15712889	8553170	7	2192,109,2169,129,162,796,168,	0,2274,4250,6695,7261,7949,11271,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	15712895	15725138	chr16:15712895-15725138	0	-	15712895	15712895	8553170	12	2186,109,209,124,89,129,162,213,213,249,153,251,	0,2268,4244,5419,6324,6689,7255,7943,8526,11265,11751,11992,
#Partially deleted in new
chr16	15721492	15724291	chr16:15721492-15724291	0	+	15721492	15721492	8553170	2	184,101,	0,2698,
#Partially deleted in new
chr16	15726673	15732993	chr16:15726673-15732993	3	+	15726673	15726673	8553170	2	327,509,	0,5811,
#Deleted in new
chr16	15741150	15741791	chr16:15741150-15741791	3	+	15741150	15741150	8553170	2	514,36,	0,605,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	15741552	15742191	chr16:15741552-15742191	0	-	15741552	15741552	8553170	2	117,432,	0,207,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	15749167	15783532	chr16:15749167-15783532	0	-	15749167	15749167	8553170	11	1164,115,174,174,153,119,96,144,99,64,1148,	0,4226,7173,8659,10408,11372,14628,22401,26910,29612,33217,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	15775841	15779423	chr16:15775841-15779423	0	-	15775841	15775841	8553170	2	335,644,	0,2938,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	15785014	15857028	chr16:15785014-15857028	0	-	15785014	15785014	8553170	5	1718,28,157,362,88,	0,13645,38240,52893,71926,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	15790974	15792717	chr16:15790974-15792717	3	-	15790974	15790974	8553170	1	1743,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	15865719	15888615	chr16:15865719-15888615	3	-	15867439	15888585	789624	5	1797,137,85,198,58,	0,7771,14084,18288,22838,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	15865720	15888602	chr16:15865720-15888602	1	-	15867439	15888585	789624	3	1796,198,45,	0,18287,22837,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	15867068	15888625	chr16:15867068-15888625	0	-	15873604	15888585	789624	4	448,137,198,68,	0,6422,16939,21489,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	15867219	15888603	chr16:15867219-15888603	1	-	15867439	15888585	789624	4	297,137,85,46,	0,6271,12584,21338,
#Partially deleted in new
chr16	15867337	15888625	chr16:15867337-15888625	1	-	15867512	15888585	789624	4	179,85,198,68,	0,12466,16670,21220,
#Partially deleted in new
chr16	15873484	15888593	chr16:15873484-15888593	0	-	15873484	15888585	789624	4	143,85,117,36,	0,6319,10523,15073,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	15885028	15886158	chr16:15885028-15886158	3	+	15885028	15885028	8553170	2	46,490,	0,640,
#Deleted in new
chr16	15931696	15932294	chr16:15931696-15932294	7	-	15931696	15931696	16724991	1	598,	0,
#Partially deleted in new
chr16	15949576	16143074	chr16:15949576-16143074	1	+	16044618	16141281	789624	32	223,177,126,138,126,62,132,231,178,162,93,204,147,88,76,127,177,168,184,30,91,136,208,311,200,127,102,147,159,167,195,1902,	0,58239,60199,64914,66919,83532,86895,94873,96259,98565,103147,106515,118579,122065,126749,129775,133789,137247,140828,149296,153050,157161,161798,165189,172398,175212,176233,182212,184773,186901,188787,191596,
#Partially deleted in new
chr16	15949576	16143062	chr16:15949576-16143062	3	+	15949751	16141281	0	31	223,177,126,138,126,62,132,231,178,162,93,204,147,88,76,127,177,168,184,91,136,208,311,200,127,102,147,159,167,195,1890,	0,58239,60199,64914,66919,83532,86895,94873,96259,98565,103147,106515,118579,122065,126749,129775,133789,137247,140828,153050,157161,161798,165189,172398,175212,176233,182212,184773,186901,188787,191596,
#Partially deleted in new
chr16	16009855	16141525	chr16:16009855-16141525	0	+	16009855	16141281	789624	30	46,138,126,62,132,231,178,162,93,204,147,88,76,127,177,168,184,30,91,136,208,311,200,127,102,147,159,167,195,353,	0,4635,6640,23253,26616,34594,35980,38286,42868,46236,58300,61786,66470,69496,73510,76968,80549,89017,92771,96882,101519,104910,112119,114933,115954,121933,124494,126622,128508,131317,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	16014539	16056561	chr16:16014539-16056561	0	+	16014539	16014539	8553170	9	89,126,62,132,231,178,162,93,470,	0,1956,18569,21932,29910,31296,33602,38184,41552,
#Partially deleted in new
chr16	16076173	16111461	chr16:16076173-16111461	0	+	16076173	16076173	8553170	8	228,127,177,168,184,91,136,87,	0,3178,7192,10650,14231,26453,30564,35201,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	16094191	16095209	chr16:16094191-16095209	7	-	16094191	16094191	16724991	2	325,88,	0,930,
#Partially deleted in new
chr16	16097991	16106868	chr16:16097991-16106868	0	+	16097991	16097991	8553170	4	290,30,91,131,	0,881,4635,8746,
#Partially deleted in new
chr16	16102682	16115069	chr16:16102682-16115069	0	+	16102682	16105433	789624	5	35,61,136,208,304,	0,2717,4055,8692,12083,
#Partially deleted in new
chr16	16106525	16122103	chr16:16106525-16122103	0	+	16106525	16106525	8553170	4	348,208,311,129,	0,4849,8240,15449,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr16	16148927	16223464	chr16:16148927-16223464	3	-	16150132	16223434	789624	31	1314,195,167,159,147,102,127,200,311,208,121,76,175,168,177,127,76,88,144,204,93,162,178,204,132,62,126,129,126,183,66,	0,1650,5700,5945,8735,10554,12510,14065,16695,20718,24356,26983,28524,29870,33484,33876,36031,38196,39903,41236,43902,49093,53073,54482,59800,63257,65396,70626,70894,72721,74471,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr16	16149565	16223471	chr16:16149565-16223471	1	-	16169849	16223434	789624	30	676,195,167,159,147,102,127,200,311,208,121,76,168,177,127,76,88,144,204,93,162,178,204,132,62,126,129,126,183,73,	0,1012,5062,5307,8097,9916,11872,13427,16057,20080,23718,26345,29232,32846,33238,35393,37558,39265,40598,43264,48455,52435,53844,59162,62619,64758,69988,70256,72083,73833,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	16149565	16165943	chr16:16149565-16165943	1	-	16150132	16165943	789624	9	676,195,167,159,147,102,127,47,273,	0,1012,5062,5307,8097,9916,11872,16057,16105,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	16149593	16155776	chr16:16149593-16155776	0	-	16149593	16149593	8553170	4	648,195,167,904,	0,984,5034,5279,
#Partially deleted in new
chr16	16150132	16223434	chr16:16150132-16223434	0	-	16169849	16223434	789624	29	109,195,167,159,147,102,127,311,208,121,76,168,177,127,76,88,144,204,93,162,178,204,132,62,126,129,126,183,36,	0,445,4495,4740,7530,9349,11305,15490,19513,23151,25778,28665,32279,32671,34826,36991,38698,40031,42697,47888,51868,53277,58595,62052,64191,69421,69689,71516,73266,
#Partially deleted in new
chr16	16173081	16177521	chr16:16173081-16177521	0	-	16173081	16173081	8553170	3	323,76,77,	0,2829,4363,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	16181704	16223494	chr16:16181704-16223494	0	-	16181704	16181704	8553170	16	221,76,88,144,204,93,162,178,204,132,62,126,129,126,219,96,	0,3254,5419,7126,8459,11125,16316,20296,21705,27023,30480,32619,37849,38117,39908,41694,
#Partially deleted in new
chr16	16201999	16223522	chr16:16201999-16223522	0	-	16220358	16223434	789624	10	179,204,132,62,126,129,126,116,183,124,	0,1410,6728,10185,12324,17554,17822,18273,19649,21399,
#Partially deleted in new
chr16	16221186	16223467	chr16:16221186-16223467	1	-	16221567	16223434	789624	2	645,69,	0,2212,
#Deleted in new
chr16	16223026	16224261	chr16:16223026-16224261	3	+	16223026	16223026	8553170	2	78,464,	0,771,
#Partially deleted in new
chr16	16232494	16294814	chr16:16232494-16294814	3	+	16232666	16294299	789624	31	337,90,46,101,107,73,153,138,90,106,151,175,142,132,137,88,64,96,219,83,160,127,114,128,142,84,111,102,120,93,647,	0,4406,7356,10666,12573,14900,18433,19468,19938,23225,23513,29007,30579,31018,32548,34549,37626,38238,41194,41498,42517,42822,44875,46167,47694,48744,50521,52910,55248,61157,61673,
#Partially deleted in new
chr16	16232529	16243227	chr16:16232529-16243227	0	+	16232666	16235863	789624	5	302,178,90,46,67,	0,3313,4371,7321,10631,
#Partially deleted in new
chr16	16232600	16294806	chr16:16232600-16294806	1	+	16232666	16294765	789624	32	231,90,46,101,107,73,153,138,90,106,151,175,142,132,137,88,64,96,219,83,160,127,114,128,142,84,111,102,120,93,128,180,	0,4300,7250,10560,12467,14794,18327,19362,19832,23119,23407,28901,30473,30912,32442,34443,37520,38132,41088,41392,42411,42716,44769,46061,47588,48638,50415,52804,55142,61051,61567,62026,
#Partially deleted in new
chr16	16232632	16294799	chr16:16232632-16294799	0	+	16232666	16247409	789624	31	199,90,46,101,73,153,138,90,106,151,175,142,132,137,88,64,96,219,83,160,127,114,128,142,84,111,102,120,93,128,173,	0,4268,7218,10528,14762,18295,19330,19800,23087,23375,28869,30441,30880,32410,34411,37488,38100,41056,41360,42379,42684,44737,46029,47556,48606,50383,52772,55110,61019,61535,61994,
#Partially deleted in new
chr16	16247016	16252100	chr16:16247016-16252100	0	+	16247016	16247016	8553170	4	184,73,153,138,	0,378,3911,4946,
#Partially deleted in new
chr16	16251549	16261549	chr16:16251549-16261549	0	+	16251549	16251549	8553170	6	27,138,90,106,151,48,	0,413,883,4170,4458,9952,
#Partially deleted in new
chr16	16251751	16256054	chr16:16251751-16256054	0	+	16251751	16251751	8553170	4	349,90,106,47,	0,681,3968,4256,
#Deleted in new
chr16	16260865	16261235	chr16:16260865-16261235	7	-	16260865	16260865	16724991	1	370,	0,
#Partially deleted in new
chr16	16265054	16267312	chr16:16265054-16267312	0	+	16265054	16265054	8553170	2	125,269,	0,1989,
#Partially deleted in new
chr16	16265055	16273773	chr16:16265055-16273773	0	+	16265055	16270135	789624	6	124,59,88,64,96,85,	0,1541,1988,5065,5677,8633,
#Partially deleted in new
chr16	16265132	16273852	chr16:16265132-16273852	0	+	16265132	16270135	789624	5	139,88,64,96,164,	0,1911,4988,5600,8556,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	16273840	16278201	chr16:16273840-16278201	0	+	16273840	16273840	8553170	5	67,83,160,127,832,	0,152,1171,1476,3529,
#Partially deleted in new
chr16	16278485	16287820	chr16:16278485-16287820	0	+	16278485	16278485	8553170	6	304,142,84,111,102,78,	0,1703,2753,4530,6919,9257,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	16280209	16288649	chr16:16280209-16288649	0	+	16280209	16280209	8553170	6	121,84,111,102,120,85,	0,1029,2806,5195,7533,8355,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	16286700	16294810	chr16:16286700-16294810	0	+	16286700	16286700	8553170	3	1162,93,643,	0,6951,7467,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	16287718	16292471	chr16:16287718-16292471	0	+	16287718	16287718	8553170	2	179,368,	0,4385,
#Partially deleted in new
chr16	16290134	16292242	chr16:16290134-16292242	3	-	16290134	16290134	8553170	2	453,114,	0,1994,
#Deleted in new
chr16	16293211	16294277	chr16:16293211-16294277	0	+	16293211	16293211	8553170	2	533,110,	0,956,
#Deleted in new
chr16	16293682	16294303	chr16:16293682-16294303	0	+	16293682	16294049	789624	3	62,122,136,	0,277,485,
#Deleted in new
chr16	16300158	16300242	chr16:16300158-16300242	3	+	16300158	16300158	5263520	1	84,	0,
#Deleted in new
chr16	16306369	16306434	chr16:16306369-16306434	3	+	16306369	16306369	5263520	1	65,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	16308541	16310000	chr16:16308541-16310000	3	-	16308541	16308541	8553170	1	1459,	0,
#Deleted in new
chr16	16309878	16309966	chr16:16309878-16309966	3	+	16309878	16309878	5263520	1	88,	0,
#Partially deleted in new
chr16	16310340	16334190	chr16:16310340-16334190	7	+	16310340	16310340	16724991	32	222,72,72,170,672,184,221,116,127,248,756,132,176,134,97,144,280,214,160,153,145,781,157,253,196,171,144,211,127,117,71,82,	0,5850,6043,6383,6765,7555,8173,8582,9108,9590,10311,11965,12287,12815,13411,14043,14314,14687,14967,15517,16524,17395,18310,18647,19024,20717,20974,21212,21513,23306,23473,23768,
#Deleted in new
chr16	16314111	16314211	chr16:16314111-16314211	3	-	16314111	16314111	8553170	1	100,	0,
#Deleted in new
chr16	16317443	16318975	chr16:16317443-16318975	0	+	16317443	16317443	8553170	3	334,184,53,	0,452,1479,
#Partially deleted in new
chr16	16317608	16324803	chr16:16317608-16324803	0	+	16317608	16317608	8553170	12	169,184,184,116,127,248,756,132,176,134,144,149,	0,287,942,1314,1840,2322,3043,4697,5019,5547,6775,7046,
#Partially deleted in new
chr16	16322304	16350586	chr16:16322304-16350586	0	+	16322304	16322304	789624	25	133,24,176,134,144,280,214,160,153,145,463,157,253,196,171,144,211,127,238,86,129,100,145,36,495,	0,223,323,851,2079,2350,2723,3003,3553,4560,5431,6346,6683,7060,8753,9010,9248,9549,11342,13747,18001,21740,22003,26392,27787,
#Deleted in new
chr16	16322348	16324527	chr16:16322348-16324527	0	+	16322348	16322348	8553170	4	89,176,134,144,	0,279,807,2035,
#Deleted in new
chr16	16324587	16324654	chr16:16324587-16324654	3	+	16324587	16324587	5263520	1	67,	0,
#Deleted in new
chr16	16329304	16329364	chr16:16329304-16329364	3	+	16329304	16329304	5263520	1	60,	0,
#Partially deleted in new
chr16	16331876	16350590	chr16:16331876-16350590	3	+	16335929	16350559	789624	10	104,238,132,129,100,145,108,61,36,499,	0,1770,3984,8429,12168,12431,15526,16650,16820,18215,
#Partially deleted in new
chr16	16333647	16347455	chr16:16333647-16347455	0	+	16333647	16333647	8553170	5	237,129,100,145,53,	0,6658,10397,10660,13755,
#Partially deleted in new
chr16	16333736	16340501	chr16:16333736-16340501	0	+	16333736	16333736	8553170	3	148,277,196,	0,2124,6569,
#Partially deleted in new
chr16	16335929	16349285	chr16:16335929-16349285	1	+	16335929	16349285	8553170	8	63,129,100,145,108,61,36,57,	0,4376,8115,8378,11473,12597,12767,13299,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	16336024	16344105	chr16:16336024-16344105	0	+	16336024	16336024	8553170	5	113,166,130,129,61,	0,652,1372,4281,8020,
#Partially deleted in new
chr16	16340327	16349316	chr16:16340327-16349316	0	+	16340327	16348987	789624	6	107,100,145,108,61,620,	0,3717,3980,7075,8199,8369,
#Partially deleted in new
chr16	16340371	16347633	chr16:16340371-16347633	0	+	16340371	16340371	8553170	4	63,100,145,231,	0,3673,3936,7031,
#Partially deleted in new
chr16	16344369	16350203	chr16:16344369-16350203	0	+	16344369	16349285	789624	6	83,108,61,36,70,112,	0,3033,4157,4327,4859,5722,
#Deleted in new
chr16	16350097	16350559	chr16:16350097-16350559	1	+	16350097	16350559	789624	1	462,	0,
#Deleted in new
chr16	16351544	16351653	chr16:16351544-16351653	7	-	16351544	16351544	16724991	1	109,	0,
#Partially deleted in new
chr16	16356223	16377507	chr16:16356223-16377507	7	+	16356223	16356223	16724991	31	72,72,170,672,184,221,116,127,248,756,132,176,134,3617,150,144,280,214,160,153,621,157,253,196,171,144,211,127,117,50,87,	0,193,533,915,1705,2324,2733,3254,3736,4457,6112,6423,6932,7528,11364,12448,12719,13092,13372,13922,14814,15726,16063,16440,18127,18384,18622,18923,20716,20923,21197,
#Deleted in new
chr16	16368875	16368942	chr16:16368875-16368942	3	+	16368875	16368875	5263520	1	67,	0,
#Partially deleted in new
chr16	16379054	16393954	chr16:16379054-16393954	3	+	16379244	16393923	789624	8	253,129,100,145,108,61,36,499,	0,4609,8344,8607,11712,12836,13006,14401,
#Partially deleted in new
chr16	16390833	16393808	chr16:16390833-16393808	0	+	16390833	16392624	789624	5	41,61,36,70,353,	0,1057,1227,1759,2622,
#Partially deleted in new
chr16	16394911	16398594	chr16:16394911-16398594	7	-	16394911	16394911	16724991	2	107,151,	0,3532,
#Deleted in new
chr16	16541216	16541847	chr16:16541216-16541847	7	-	16541216	16541216	16724991	1	631,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	16658226	16664135	chr16:16658226-16664135	3	+	16658226	16658226	8553170	3	112,93,469,	0,1278,5440,
#Deleted in new
chr16	16760904	16762465	chr16:16760904-16762465	3	+	16760904	16760904	8553170	1	1561,	0,
#Deleted in new
chr16	16952501	16953468	chr16:16952501-16953468	7	-	16952501	16952501	16724991	1	967,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	17082294	17085049	chr16:17082294-17085049	3	-	17082294	17082294	8553170	1	2755,	0,
#Deleted in new
chr16	17094350	17094927	chr16:17094350-17094927	7	-	17094350	17094350	16724991	2	191,306,	0,271,
#Deleted in new
chr16	17096201	17096421	chr16:17096201-17096421	7	-	17096201	17096201	16724991	1	220,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	17101768	17470881	chr16:17101768-17470881	3	-	17108694	17470796	0	12	7249,334,196,263,177,217,81,203,173,511,39,448,	0,15877,25897,32704,36586,39384,57060,96443,98713,157219,256243,368665,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	17134503	17138736	chr16:17134503-17138736	3	+	17134503	17134503	789624	3	47,99,495,	0,3012,3738,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	17192862	17194232	chr16:17192862-17194232	3	-	17192862	17192862	8553170	1	1370,	0,
#Partially deleted in new
chr16	17198030	17259028	chr16:17198030-17259028	0	-	17198030	17198030	8553170	3	384,173,41,	0,2451,60957,
#Deleted in new
chr16	17227022	17228000	chr16:17227022-17228000	3	-	17227022	17227022	8553170	1	978,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	17249673	17251395	chr16:17249673-17251395	3	-	17249673	17249673	8553170	1	1722,	0,
#Partially deleted in new
chr16	17355227	17369725	chr16:17355227-17369725	0	-	17355227	17355227	8553170	3	188,39,132,	0,2784,14366,
#Deleted in new
chr16	17445824	17446380	chr16:17445824-17446380	3	-	17445824	17445824	8553170	1	556,	0,
#Partially deleted in new
chr16	17453469	17456236	chr16:17453469-17456236	3	+	17453469	17453469	8553170	2	620,565,	0,2202,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	17540330	17540985	chr16:17540330-17540985	3	-	17540330	17540330	8553170	2	512,39,	0,616,
#Deleted in new
chr16	17825251	17826906	chr16:17825251-17826906	3	+	17825251	17825251	8553170	1	1655,	0,
#Deleted in new
chr16	17932719	17933275	chr16:17932719-17933275	7	+	17932719	17932719	16724991	1	556,	0,
#Partially deleted in new
chr16	17933188	17972542	chr16:17933188-17972542	1	-	17933188	17933188	8553170	4	41,146,107,152,	0,34354,38651,39202,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	17961596	17962370	chr16:17961596-17962370	3	+	17961596	17961596	8553170	1	774,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	17967392	18151595	chr16:17967392-18151595	3	-	17967392	17967392	8553170	3	296,107,144,	0,4447,184059,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	18002805	18173063	chr16:18002805-18173063	3	-	18002805	18002805	8553170	2	643,48,	0,170210,
#Deleted in new
chr16	18170355	18170959	chr16:18170355-18170959	7	+	18170355	18170355	16724991	1	604,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	18201500	18201956	chr16:18201500-18201956	3	+	18201500	18201500	8553170	1	456,	0,
#Partially deleted in new
chr16	18313293	18316984	chr16:18313293-18316984	7	+	18313293	18313293	16724991	2	155,112,	0,3579,
#Partially deleted in new
chr16	18317941	18336736	chr16:18317941-18336736	3	-	18317967	18332662	789624	10	494,36,61,108,145,100,129,132,257,103,	0,1853,1998,3075,6149,6457,10172,14658,16769,18692,
#Partially deleted in new
chr16	18317946	18332662	chr16:18317946-18332662	1	-	18317967	18332662	789624	8	489,36,61,108,145,100,129,63,	0,1848,1993,3070,6144,6452,10167,14653,
#Partially deleted in new
chr16	18318007	18344283	chr16:18318007-18344283	3	-	18318007	18318007	8553170	22	428,36,61,108,145,100,129,117,127,211,144,171,196,235,157,621,145,153,160,214,280,144,	0,1787,1932,3009,6083,6391,10106,16843,18626,18843,19148,19378,21040,21378,21793,22241,23614,24649,25192,25418,25725,26132,
#Partially deleted in new
chr16	18319257	18324235	chr16:18319257-18324235	0	-	18319257	18324235	789624	5	41,36,61,108,145,	0,537,682,1759,4833,
#Partially deleted in new
chr16	18334399	18352476	chr16:18334399-18352476	5	-	18334399	18334399	16724991	31	87,50,117,127,211,144,171,196,253,157,621,145,153,160,214,280,144,95,134,176,132,756,248,127,116,221,184,672,170,72,72,	0,311,451,2234,2451,2756,2986,4648,4968,5401,5849,7222,8257,8800,9026,9333,9740,10421,10978,11464,11830,12860,14089,14692,15229,15533,16188,16490,17374,17812,18005,
#Deleted in new
chr16	18341621	18343097	chr16:18341621-18343097	4	-	18341621	18341621	16724991	2	145,441,	0,1035,
#Deleted in new
chr16	18341734	18343638	chr16:18341734-18343638	4	-	18341734	18341734	16724991	4	32,153,160,213,	0,922,1465,1691,
#Deleted in new
chr16	18343423	18344168	chr16:18343423-18344168	6	-	18343423	18343423	16724991	3	216,280,29,	0,309,716,
#Deleted in new
chr16	18344012	18344079	chr16:18344012-18344079	3	-	18344012	18344012	5263520	1	67,	0,
#Deleted in new
chr16	18344139	18346148	chr16:18344139-18346148	4	-	18344139	18344139	16724991	3	144,134,285,	0,1238,1724,
#Deleted in new
chr16	18344139	18346318	chr16:18344139-18346318	4	-	18344139	18344139	16724991	4	144,134,176,89,	0,1238,1724,2090,
#Deleted in new
chr16	18357025	18357136	chr16:18357025-18357136	7	+	18357025	18357025	16724991	1	111,	0,
#Partially deleted in new
chr16	18358085	18375069	chr16:18358085-18375069	1	-	18359394	18372785	8553170	10	503,70,36,61,108,145,100,129,132,238,	0,1296,1862,2007,3084,6141,6449,10172,14637,16746,
#Partially deleted in new
chr16	18358094	18376839	chr16:18358094-18376839	3	-	18358120	18372785	789624	10	494,36,61,108,145,100,129,132,238,104,	0,1853,1998,3075,6132,6440,10163,14628,16737,18641,
#Deleted in new
chr16	18358120	18358582	chr16:18358120-18358582	1	-	18358120	18358582	789624	1	462,	0,
#Partially deleted in new
chr16	18359394	18372785	chr16:18359394-18372785	1	-	18359394	18372785	8553170	8	57,36,61,108,145,100,129,63,	0,553,698,1775,4832,5140,8863,13328,
#Partially deleted in new
chr16	18359833	18368364	chr16:18359833-18368364	0	-	18359833	18368364	789624	6	150,61,108,145,100,107,	0,259,1336,4393,4701,8424,
#Partially deleted in new
chr16	18361046	18368320	chr16:18361046-18368320	0	-	18361046	18361046	8553170	4	231,145,100,63,	0,3180,3488,7211,
#Partially deleted in new
chr16	18361224	18379331	chr16:18361224-18379331	0	-	18361224	18361224	8553170	10	53,145,100,129,238,127,211,144,171,177,	0,3002,3310,7033,13607,15511,15728,16033,16263,17930,
#Partially deleted in new
chr16	18364269	18374979	chr16:18364269-18374979	0	-	18364269	18364269	8553170	5	102,100,129,277,148,	0,265,3988,8308,10562,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	18368257	18372690	chr16:18368257-18372690	0	-	18368257	18368257	8553170	4	129,130,166,113,	0,2910,3604,4320,
#Partially deleted in new
chr16	18374520	18401940	chr16:18374520-18401940	5	-	18374520	18374520	16724991	32	87,53,117,127,211,144,171,196,253,157,620,153,160,214,280,144,150,3617,134,176,132,756,248,127,116,221,184,672,170,72,72,357,	0,311,432,2215,2432,2737,2967,4634,4954,5387,5839,7362,7905,8131,8438,8845,9923,10292,14371,14838,15193,16224,17453,18056,18588,18892,19548,19850,20734,21172,21365,27063,
#Deleted in new
chr16	18379350	18379410	chr16:18379350-18379410	3	-	18379350	18379350	5263520	1	60,	0,
#Deleted in new
chr16	18382706	18384504	chr16:18382706-18384504	6	-	18382706	18382706	16724991	4	159,280,144,61,	0,252,659,1737,
#Deleted in new
chr16	18383365	18390919	chr16:18383365-18390919	4	-	18383365	18383365	16724991	5	144,134,176,132,175,	0,5526,5993,6348,7379,
#Deleted in new
chr16	18383470	18385229	chr16:18383470-18385229	4	-	18383470	18383470	16724991	3	39,150,417,	0,973,1342,
#Deleted in new
chr16	18385850	18389833	chr16:18385850-18389833	4	-	18385850	18385850	16724991	4	60,134,176,120,	0,3041,3508,3863,
#Partially deleted in new
chr16	18394971	18401925	chr16:18394971-18401925	4	-	18394971	18394971	16724991	5	71,170,72,72,342,	0,283,721,914,6612,
#Deleted in new
chr16	18397936	18398036	chr16:18397936-18398036	3	+	18397936	18397936	8553170	1	100,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	18402145	18403604	chr16:18402145-18403604	3	+	18402145	18402145	8553170	1	1459,	0,
#Deleted in new
chr16	18402177	18402271	chr16:18402177-18402271	3	-	18402177	18402177	5263520	1	94,	0,
#Deleted in new
chr16	18405697	18405762	chr16:18405697-18405762	3	-	18405697	18405697	5263520	1	65,	0,
#Deleted in new
chr16	18411308	18411851	chr16:18411308-18411851	3	-	18411308	18411308	8553170	1	543,	0,
#Deleted in new
chr16	18411893	18411977	chr16:18411893-18411977	3	-	18411893	18411893	5263520	1	84,	0,
#Partially deleted in new
chr16	18417324	18562211	chr16:18417324-18562211	1	-	18417836	18562040	789624	31	644,93,120,102,111,84,142,128,114,127,160,83,219,96,64,88,137,132,142,175,151,106,90,138,153,73,107,101,46,90,336,	0,1067,6949,9305,11685,13490,14482,16023,17329,101904,102176,103272,103440,106519,107164,110212,112176,113712,114141,115680,121201,121534,124847,125269,126292,129903,132196,134114,137482,140377,144551,
#Partially deleted in new
chr16	18417325	18433412	chr16:18417325-18433412	1	-	18417836	18433412	789624	8	643,93,120,102,111,84,142,65,	0,1066,6948,9304,11684,13489,14481,16022,
#Partially deleted in new
chr16	18417329	18562106	chr16:18417329-18562106	1	-	18417370	18562040	789624	32	180,128,93,120,102,111,84,142,128,114,127,160,83,219,96,64,88,137,132,142,175,151,106,90,138,153,73,107,101,46,90,231,	0,511,1062,6944,9300,11680,13485,14477,16018,17324,101899,102171,103267,103435,106514,107159,110207,112171,113707,114136,115675,121196,121529,124842,125264,126287,129898,132191,134109,137477,140372,144546,
#Partially deleted in new
chr16	18417336	18562074	chr16:18417336-18562074	0	-	18547285	18562040	789624	31	173,128,93,120,102,111,84,142,128,114,127,160,83,219,96,64,88,137,132,142,175,151,106,90,138,153,73,101,46,90,199,	0,504,1055,6937,9293,11673,13478,14470,16011,17317,101892,102164,103260,103428,106507,107152,110200,112164,113700,114129,115668,121189,121522,124835,125257,126280,129891,134102,137470,140365,144539,
#Partially deleted in new
chr16	18418431	18424765	chr16:18418431-18424765	0	-	18418431	18418431	8553170	2	53,492,	0,5842,
#Deleted in new
chr16	18488300	18488365	chr16:18488300-18488365	3	-	18488300	18488300	5263520	1	65,	0,
#Deleted in new
chr16	18494492	18494576	chr16:18494492-18494576	3	-	18494492	18494492	5263520	1	84,	0,
#Partially deleted in new
chr16	18499924	18562112	chr16:18499924-18562112	1	-	18499969	18562040	789624	32	184,128,93,120,102,111,84,142,128,114,127,160,83,219,96,64,88,137,132,142,175,151,106,90,138,153,73,107,101,46,90,237,	0,515,1066,6948,9241,11621,13425,14417,15958,17264,19304,19576,20672,20840,23919,24564,27612,29576,31112,31541,33080,38601,38934,42247,42669,43692,47303,49596,51514,54882,57777,61951,
#Partially deleted in new
chr16	18499924	18562112	chr16:18499924-18562112	3	-	18500435	18562040	789624	31	643,93,120,102,111,84,142,128,114,127,160,83,219,96,64,88,137,132,142,175,151,106,90,138,153,73,107,101,46,90,237,	0,1066,6948,9241,11621,13425,14417,15958,17264,19304,19576,20672,20840,23919,24564,27612,29576,31112,31541,33080,38601,38934,42247,42669,43692,47303,49596,51514,54882,57777,61951,
#Partially deleted in new
chr16	18499935	18562074	chr16:18499935-18562074	1	-	18499969	18551446	789624	31	173,128,93,120,102,111,84,142,128,114,127,160,83,219,96,64,88,137,132,142,175,151,106,90,138,153,73,101,46,90,199,	0,504,1055,6937,9230,11610,13414,14406,15947,17253,19293,19565,20661,20829,23908,24553,27601,29565,31101,31530,33069,38590,38923,42236,42658,43681,47292,51503,54871,57766,61940,
#Partially deleted in new
chr16	18520819	18529547	chr16:18520819-18529547	0	-	18524537	18529547	789624	5	164,96,64,88,139,	0,3024,3669,6717,8589,
#Partially deleted in new
chr16	18520898	18533102	chr16:18520898-18533102	0	-	18524537	18533102	789624	9	85,96,64,88,59,137,132,142,98,	0,2945,3590,6638,7114,8602,10138,10567,12106,
#Deleted in new
chr16	18533417	18533817	chr16:18533417-18533817	7	+	18533417	18533417	16724991	1	400,	0,
#Partially deleted in new
chr16	18538629	18542942	chr16:18538629-18542942	0	-	18538629	18538629	8553170	4	47,106,90,349,	0,229,3542,3964,
#Partially deleted in new
chr16	18551472	18562176	chr16:18551472-18562176	0	-	18558833	18562040	789624	5	67,46,90,178,301,	0,3334,6229,7204,10403,
#Deleted in new
chr16	18570447	18571068	chr16:18570447-18571068	0	-	18570447	18570447	8553170	1	621,	0,
#Deleted in new
chr16	18570454	18571683	chr16:18570454-18571683	3	-	18570454	18570454	8553170	2	458,78,	0,1151,
#Partially deleted in new
chr16	18571161	18573522	chr16:18571161-18573522	5	+	18571161	18571161	16724991	2	150,646,	0,1715,
#Partially deleted in new
chr16	18571187	18598328	chr16:18571187-18598328	7	+	18571187	18571187	16724991	11	124,184,116,126,129,126,62,132,204,178,1562,	0,1689,3132,3573,3838,9022,11218,14618,19916,21351,25579,
#Partially deleted in new
chr16	18571215	18580252	chr16:18571215-18580252	4	+	18571215	18571215	16724991	5	96,184,126,129,43,	0,1661,3545,3810,8994,
#Partially deleted in new
chr16	18571275	18592716	chr16:18571275-18592716	5	+	18571275	18571275	16724991	9	29,184,126,129,126,62,132,204,178,	0,1601,3485,3750,8934,11130,14530,19828,21263,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	18781294	18790334	chr16:18781294-18790334	3	-	18783008	18789113	0	5	1808,86,80,138,91,	0,3443,6768,7686,8949,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	18781990	18790334	chr16:18781990-18790334	0	-	18783008	18789113	0	6	229,239,86,80,138,25,	0,873,2747,6072,6990,8319,
#Partially deleted in new
chr16	18782955	18790383	chr16:18782955-18790383	1	-	18783008	18789113	0	5	147,86,80,138,74,	0,1782,5107,6025,7354,
#Partially deleted in new
chr16	18782961	18790362	chr16:18782961-18790362	0	-	18784797	18789113	789624	4	141,86,138,53,	0,1776,6019,7348,
#Partially deleted in new
chr16	18782967	18790334	chr16:18782967-18790334	0	-	18788085	18789113	789624	5	135,86,43,138,25,	0,1770,5095,6013,7342,
#Partially deleted in new
chr16	18782967	18790334	chr16:18782967-18790334	0	-	18788142	18789113	789624	5	135,86,97,138,25,	0,1770,5095,6013,7342,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	18782967	18786795	chr16:18782967-18786795	0	-	18782967	18782967	8553170	1	3828,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	18782967	18789137	chr16:18782967-18789137	1	-	18784797	18789113	789624	4	1856,97,80,157,	0,3272,5095,6013,
#Partially deleted in new
chr16	18782968	18790260	chr16:18782968-18790260	1	-	18783008	18789113	0	5	134,86,80,138,364,	0,1769,5094,6012,6928,
#Partially deleted in new
chr16	18782980	18784825	chr16:18782980-18784825	0	-	18783088	18784825	789624	3	122,74,88,	0,660,1757,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	18784020	18789119	chr16:18784020-18789119	1	-	18784733	18789113	789624	3	803,80,139,	0,4042,4960,
#Partially deleted in new
chr16	18788062	18801519	chr16:18788062-18801519	3	-	18788062	18801466	789624	7	80,138,85,118,120,134,89,	0,918,6536,7401,9862,10638,13368,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	18788543	18790340	chr16:18788543-18790340	0	-	18788543	18788543	8553170	2	575,31,	0,1766,
#Partially deleted in new
chr16	18791666	18801678	chr16:18791666-18801678	3	-	18793251	18801466	789624	6	1704,85,118,120,134,248,	0,2932,3797,6258,7034,9764,
#Partially deleted in new
chr16	18792878	18801547	chr16:18792878-18801547	0	-	18794673	18801466	789624	5	492,85,120,134,117,	0,1720,5046,5822,8552,
#Partially deleted in new
chr16	18792946	18801424	chr16:18792946-18801424	1	-	18793251	18798783	789624	6	424,85,118,120,134,226,	0,1652,2517,4978,5754,8252,
#Partially deleted in new
chr16	18793021	18801547	chr16:18793021-18801547	1	-	18793251	18801466	789624	3	349,112,117,	0,5701,8409,
#Partially deleted in new
chr16	18794673	18801553	chr16:18794673-18801553	0	-	18794673	18801466	789624	5	10,118,28,112,123,	0,790,3251,4049,6757,
#Partially deleted in new
chr16	18795175	18801548	chr16:18795175-18801548	0	-	18795175	18795175	8553170	4	406,120,134,118,	0,2749,3525,6255,
#Partially deleted in new
chr16	18797711	18801544	chr16:18797711-18801544	0	-	18797711	18797711	8553170	3	333,134,114,	0,989,3719,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	18798170	18801572	chr16:18798170-18801572	0	-	18798170	18798170	8553170	2	664,142,	0,3260,
#Partially deleted in new
chr16	18803082	18812181	chr16:18803082-18812181	3	+	18803082	18803082	8553170	2	136,225,	0,8874,
#Boundary problem: need 63, got 0, diff 63, mapped 0.0
chr16	18804852	18926454	chr16:18804852-18926454	3	-	18809568	18926041	789624	63	4794,107,180,107,212,228,180,153,138,470,190,151,227,235,273,280,173,191,219,110,139,249,230,247,223,155,218,162,178,231,139,145,285,249,121,160,148,110,202,143,155,165,197,200,141,102,88,119,162,131,270,102,225,174,98,73,126,214,59,137,156,164,505,	0,6908,7095,10322,10587,11449,12438,14649,23178,24433,25073,25366,28087,29351,30039,31080,31507,32400,33161,33504,33698,34845,36712,37355,40576,42600,42963,44364,45096,45384,47214,47465,48730,49803,53317,54169,54703,55814,58797,59149,61768,63337,63670,64251,65001,65757,65948,66511,67331,67641,71271,72278,74642,77312,79217,80237,80688,84519,86010,87365,91199,91940,121097,
#Boundary problem: need 61, got 0, diff 61, mapped 0.0
chr16	18807759	18896874	chr16:18807759-18896874	0	-	18809568	18896874	789624	61	1887,107,180,107,212,228,180,153,138,470,190,151,227,235,273,280,173,191,219,110,139,249,230,247,223,155,218,162,178,231,139,145,285,249,121,160,148,110,202,143,155,165,197,200,141,102,88,119,162,131,270,102,225,174,98,73,126,214,59,137,82,	0,4001,4188,7415,7680,8542,9531,11742,20271,21526,22166,22459,25180,26444,27132,28173,28600,29493,30254,30597,30791,31938,33805,34448,37669,39693,40056,41457,42189,42477,44307,44558,45823,46896,50410,51262,51796,52907,55890,56242,58861,60430,60763,61344,62094,62850,63041,63604,64424,64734,68364,69371,71735,74405,76310,77330,77781,81612,83103,84458,89033,
#Partially deleted in new
chr16	18812010	18816179	chr16:18812010-18816179	0	-	18812010	18812010	8553170	3	117,107,740,	0,3164,3429,
#Partially deleted in new
chr16	18838460	18850361	chr16:18838460-18850361	0	-	18838460	18838460	8553170	10	229,249,230,247,223,155,218,162,178,125,	0,1237,3104,3747,6968,8992,9355,10756,11488,11776,
#Partially deleted in new
chr16	18847738	18849370	chr16:18847738-18849370	0	-	18847738	18847738	8553170	2	295,154,	0,1478,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	18856337	18861487	chr16:18856337-18861487	0	-	18856337	18856337	8553170	2	3366,821,	0,4329,
#Partially deleted in new
chr16	18857785	18876305	chr16:18857785-18876305	0	-	18858134	18876305	789624	17	505,160,148,110,202,143,155,165,197,200,141,102,88,119,162,131,182,	0,1236,1770,2881,5864,6216,8835,10404,10737,11318,12068,12824,13015,13578,14398,14708,18338,
#Partially deleted in new
chr16	18866146	18868218	chr16:18866146-18868218	0	-	18866439	18868218	789624	3	366,155,29,	0,474,2043,
#Partially deleted in new
chr16	18866686	18872550	chr16:18866686-18872550	0	-	18868346	18872550	789624	10	89,165,87,200,141,102,88,119,162,57,	0,1503,1946,2417,3167,3923,4114,4677,5497,5807,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	18875101	18896956	chr16:18875101-18896956	0	-	18876111	18896956	789624	11	1292,102,225,174,98,73,126,214,59,137,164,	0,2029,4393,7063,8968,9988,10439,14270,15761,17116,21691,
#Partially deleted in new
chr16	18875607	18900044	chr16:18875607-18900044	1	-	18876111	18900000	789624	13	786,102,225,174,98,73,126,214,59,137,156,164,58,	0,1523,3887,6557,8462,9482,9933,13764,15255,16610,20444,21185,24379,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	18875946	18879661	chr16:18875946-18879661	0	-	18875946	18875946	8553170	2	447,2531,	0,1184,
#Partially deleted in new
chr16	18884104	18926158	chr16:18884104-18926158	0	-	18884104	18900000	789624	10	63,73,126,214,59,137,156,164,58,209,	0,985,1436,5267,6758,8113,11947,12688,15882,41845,
#Partially deleted in new
chr16	18884746	18900097	chr16:18884746-18900097	1	-	18885474	18892346	789624	6	920,214,59,137,163,95,	0,4625,6116,7471,12046,15256,
#Partially deleted in new
chr16	18890888	18925750	chr16:18890888-18925750	0	-	18890888	18896067	789624	5	33,137,156,164,72,	0,1329,5163,5904,34790,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	18896800	18911713	chr16:18896800-18911713	0	-	18896800	18900000	789624	3	156,58,351,	0,3186,14562,
#Deleted in new
chr16	18924915	18926039	chr16:18924915-18926039	0	-	18924915	18924915	8553170	2	631,90,	0,1034,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	18926862	18937043	chr16:18926862-18937043	3	+	18926862	18926862	8553170	2	275,188,	0,9993,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	18983933	19063181	chr16:18983933-19063181	3	+	18984063	19061843	789624	16	197,244,149,168,83,146,148,174,158,118,98,187,131,156,79,1404,	0,25238,32516,37695,39179,46290,51742,53940,56355,60950,61407,63129,67752,72608,75482,77844,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	18983933	19059996	chr16:18983933-19059996	1	+	18984063	19059665	789624	15	197,244,149,168,83,146,148,174,158,118,98,187,131,156,581,	0,25238,32516,37695,39179,46290,51742,53940,56355,60950,61407,63129,67752,72608,75482,
#Partially deleted in new
chr16	18984022	19045139	chr16:18984022-19045139	0	+	18984022	18984022	8553170	10	108,244,149,168,83,146,135,170,158,256,	0,25149,32427,37606,39090,46201,51653,53855,56266,60861,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	18984286	19063942	chr16:18984286-19063942	1	+	19016468	19061843	789624	16	295,244,149,168,83,146,148,174,158,118,98,187,131,156,79,2165,	0,24885,32163,37342,38826,45937,51389,53587,56002,60597,61054,62776,67399,72255,75129,77491,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	19012156	19012263	chr16:19012156-19012263	3	+	19012156	19012156	8553170	1	107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	19033515	19038030	chr16:19033515-19038030	0	+	19033515	19033515	8553170	3	302,135,157,	0,2160,4358,
#Partially deleted in new
chr16	19062753	19067395	chr16:19062753-19067395	1	-	19062753	19062753	789624	3	142,235,78,	0,1051,4564,
#Partially deleted in new
chr16	19062861	19067691	chr16:19062861-19067691	3	-	19062861	19062861	789624	3	34,235,111,	0,943,4719,
#Partially deleted in new
chr16	19062861	19067641	chr16:19062861-19067641	0	-	19062861	19062861	8553170	3	34,235,91,	0,943,4689,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	19065990	19066694	chr16:19065990-19066694	3	+	19065990	19065990	8553170	1	704,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	19067598	19080095	chr16:19067598-19080095	3	+	19067664	19078158	789624	6	139,179,115,140,69,2015,	0,4329,6322,8122,9707,10482,
#Partially deleted in new
chr16	19067625	19078283	chr16:19067625-19078283	0	+	19067664	19075789	789624	5	112,179,140,69,203,	0,4302,8095,9680,10455,
#Partially deleted in new
chr16	19067640	19079162	chr16:19067640-19079162	1	+	19067664	19078158	789624	7	97,179,115,140,69,79,35,	0,4287,6280,8080,9665,10440,11487,
#Partially deleted in new
chr16	19067642	19075777	chr16:19067642-19075777	0	+	19071968	19075777	789624	4	95,323,115,57,	0,4141,6278,8078,
#Partially deleted in new
chr16	19067645	19072401	chr16:19067645-19072401	0	+	19067645	19067645	8553170	2	92,474,	0,4282,
#Partially deleted in new
chr16	19067660	19078278	chr16:19067660-19078278	0	+	19067664	19074079	789624	6	77,179,177,140,69,198,	0,4267,6260,8060,9645,10420,
#Partially deleted in new
chr16	19067916	19078304	chr16:19067916-19078304	1	+	19071968	19078158	789624	6	92,179,115,140,69,224,	0,4011,6004,7804,9389,10164,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	19067923	19075858	chr16:19067923-19075858	0	+	19071968	19075858	789624	4	307,179,115,138,	0,4004,5997,7797,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	19067988	19079262	chr16:19067988-19079262	1	+	19068874	19078158	789624	6	890,179,115,140,69,1182,	0,3939,5932,7732,9317,10092,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	19078591	19079262	chr16:19078591-19079262	0	+	19078591	19078591	8553170	2	308,276,	0,395,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	19078682	19079256	chr16:19078682-19079256	0	+	19078682	19078682	8553170	2	217,129,	0,445,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	19086855	19098110	chr16:19086855-19098110	3	+	19086855	19086855	8553170	3	145,257,439,	0,6365,10816,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	19111034	19111484	chr16:19111034-19111484	3	-	19111034	19111034	8553170	1	450,	0,
#Deleted in new
chr16	19113931	19116455	chr16:19113931-19116455	0	+	19113931	19113931	8553170	2	193,1815,	0,709,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	19114058	19173466	chr16:19114058-19173466	0	+	19114058	19114058	8553170	5	66,145,99,18,37,	0,582,39029,58701,59371,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	19114382	19121629	chr16:19114382-19121629	3	+	19114461	19116069	789624	1	7247,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	19119975	19121629	chr16:19119975-19121629	3	-	19119975	19119975	8553170	2	216,921,	0,733,
#Partially deleted in new
chr16	19167970	19183617	chr16:19167970-19183617	0	+	19180391	19183617	789624	5	174,18,149,149,90,	0,4789,5459,12420,15557,
#Partially deleted in new
chr16	19168023	19183659	chr16:19168023-19183659	0	+	19180391	19183659	789624	4	121,149,149,132,	0,5406,12367,15504,
#Partially deleted in new
chr16	19168248	19268334	chr16:19168248-19268334	3	+	19168646	19267076	0	8	413,18,149,149,620,121,156,1455,	0,4511,5181,12142,15279,54796,56434,98631,
#Partially deleted in new
chr16	19168259	19250078	chr16:19168259-19250078	1	+	19180391	19250074	789624	7	402,135,149,620,121,156,138,	0,5184,12131,15268,54785,56423,81681,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	19169781	19267128	chr16:19169781-19267128	1	+	19180391	19267076	789624	6	3797,149,620,121,156,249,	0,10609,13746,53263,54901,97098,
#Partially deleted in new
chr16	19172353	19267107	chr16:19172353-19267107	1	+	19172611	19267076	789624	8	261,18,149,149,620,121,156,228,	0,406,1076,8037,11174,50691,52329,94526,
#Partially deleted in new
chr16	19180171	19184028	chr16:19180171-19184028	0	+	19180171	19180171	8553170	2	368,501,	0,3356,
#Partially deleted in new
chr16	19183903	19249970	chr16:19183903-19249970	0	+	19183903	19224764	789624	4	244,121,136,30,	0,39141,40799,66037,
#Partially deleted in new
chr16	19211156	19267118	chr16:19211156-19267118	1	+	19211419	19267076	789624	4	296,121,156,239,	0,11888,13526,55723,
#Partially deleted in new
chr16	19285778	19304400	chr16:19285778-19304400	1	+	19285851	19304218	789624	3	161,166,339,	0,12894,18283,
#Partially deleted in new
chr16	19285782	19304394	chr16:19285782-19304394	0	+	19285851	19298760	789624	4	157,188,104,333,	0,12868,18089,18279,
#Partially deleted in new
chr16	19285851	19309083	chr16:19285851-19309083	3	+	19285851	19309083	789624	5	88,166,94,133,80,	0,12821,18210,21693,23152,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	19304880	19310947	chr16:19304880-19310947	0	+	19304880	19304880	8553170	3	304,133,1944,	0,2664,4123,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	19315163	19316526	chr16:19315163-19316526	3	+	19315163	19315163	8553170	1	1363,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	19334010	19337804	chr16:19334010-19337804	3	+	19334010	19334010	8553170	3	274,390,825,	0,1183,2969,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	19354461	19367878	chr16:19354461-19367878	0	-	19354461	19354461	8553170	2	340,68,	0,13349,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	19392212	19393468	chr16:19392212-19393468	3	-	19392212	19392212	8553170	1	1256,	0,
#Partially deleted in new
chr16	19410495	19430640	chr16:19410495-19430640	0	+	19410495	19410495	8553170	2	45,228,	0,19917,
#Partially deleted in new
chr16	19410538	19498140	chr16:19410538-19498140	1	+	19440038	19497966	789624	21	235,228,867,170,90,100,88,249,152,145,152,79,98,96,76,134,174,79,105,43,221,	0,19874,29421,33542,39003,49696,52741,53237,55543,59142,63586,66901,68892,70831,76406,76654,79856,81611,83723,86582,87381,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr16	19410722	19499113	chr16:19410722-19499113	1	+	19440038	19497966	789624	21	454,228,867,170,90,100,88,249,152,145,156,152,79,98,96,76,134,79,105,43,1194,	0,19690,29237,33358,38819,49512,52557,53053,55359,58958,61365,63402,66717,68708,70647,76222,76470,81427,83539,86398,87197,
#Deleted in new
chr16	19410728	19411662	chr16:19410728-19411662	3	-	19410728	19410728	8553170	2	570,95,	0,839,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr16	19410734	19499113	chr16:19410734-19499113	1	+	19440038	19497966	789624	22	442,228,867,170,90,100,88,249,152,145,156,152,79,98,96,76,134,174,79,105,43,1194,	0,19678,29225,33346,38807,49500,52545,53041,55347,58946,61353,63390,66705,68696,70635,76210,76458,79660,81415,83527,86386,87185,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr16	19417695	19499113	chr16:19417695-19499113	1	+	19440038	19497966	789624	22	397,228,867,170,90,100,88,249,152,145,156,152,79,98,96,76,134,174,79,105,43,1194,	0,12717,22264,26385,31846,42539,45584,46080,48386,51985,54392,56429,59744,61735,63674,69249,69497,72699,74454,76566,79425,80224,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr16	19456449	19499113	chr16:19456449-19499113	3	+	19456706	19497966	789624	18	567,100,88,249,152,145,156,152,79,98,96,76,134,174,79,105,43,1194,	0,3785,6830,7326,9632,13231,15638,17675,20990,22981,24920,30495,30743,33945,35700,37812,40671,41470,
#Partially deleted in new
chr16	19456483	19498218	chr16:19456483-19498218	1	+	19460263	19497966	789624	18	262,100,88,249,152,145,156,152,79,98,96,76,134,174,79,105,43,299,	0,3751,6796,7292,9598,13197,15604,17641,20956,22947,24886,30461,30709,33911,35666,37778,40637,41436,
#Partially deleted in new
chr16	19456486	19492317	chr16:19456486-19492317	0	+	19456486	19456486	8553170	15	530,100,88,249,152,145,156,152,79,98,96,76,134,174,168,	0,3748,6793,7289,9595,13194,15601,17638,20953,22944,24883,30458,30706,33908,35663,
#Partially deleted in new
chr16	19474164	19481426	chr16:19474164-19481426	0	+	19474164	19474773	789624	5	112,117,79,98,57,	0,593,3275,5266,7205,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	19476915	19487899	chr16:19476915-19487899	3	-	19476915	19476915	8553170	3	165,392,76,	0,10013,10908,
#Partially deleted in new
chr16	19486940	19498277	chr16:19486940-19498277	0	+	19486940	19490412	789624	6	80,174,79,105,43,358,	0,3454,5209,7321,10180,10979,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	19501688	19522145	chr16:19501688-19522145	3	-	19503469	19521964	789624	6	1929,212,93,106,176,442,	0,3192,5998,9150,15325,20015,
#Deleted in new
chr16	19501688	19502286	chr16:19501688-19502286	3	+	19501688	19501688	8553170	2	201,309,	0,289,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	19502382	19522123	chr16:19502382-19522123	0	-	19517119	19521964	789624	6	1235,212,93,106,172,420,	0,2498,5304,8456,14631,19321,
#Deleted in new
chr16	19503100	19505132	chr16:19503100-19505132	0	-	19503100	19503100	8553170	2	517,252,	0,1780,
#Partially deleted in new
chr16	19503860	19517168	chr16:19503860-19517168	0	-	19505088	19517168	789624	4	1232,125,106,155,	0,3794,6978,13153,
#Deleted in new
chr16	19503860	19504625	chr16:19503860-19504625	3	+	19503860	19503860	8553170	1	765,	0,
#Partially deleted in new
chr16	19507684	19521588	chr16:19507684-19521588	0	-	19507684	19517120	789624	4	95,106,172,366,	0,3154,9329,13538,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	19523810	19553408	chr16:19523810-19553408	3	+	19527881	19551271	789624	15	278,143,156,129,1648,131,178,140,117,102,117,74,63,60,2213,	0,1908,4056,8605,12129,16846,18076,18810,19067,20986,21283,22006,22601,24144,27385,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	19523856	19553408	chr16:19523856-19553408	1	+	19527881	19551248	789624	15	232,156,129,1648,131,178,140,117,102,117,74,63,60,86,2213,	0,4010,8559,12083,16800,18030,18764,19021,20940,21237,21960,22555,24098,24658,27339,
#Deleted in new
chr16	19523878	19527169	chr16:19523878-19527169	0	+	19523878	19523878	8553170	2	210,2390,	0,901,
#Partially deleted in new
chr16	19523938	19528031	chr16:19523938-19528031	0	+	19527881	19528031	789624	4	150,240,143,165,	0,841,1780,3928,
#Deleted in new
chr16	19523941	19525799	chr16:19523941-19525799	0	+	19523941	19523941	8553170	3	147,445,81,	0,838,1777,
#Partially deleted in new
chr16	19523960	19542066	chr16:19523960-19542066	0	+	19527881	19540674	789624	4	128,156,131,180,	0,3906,16696,17926,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	19527835	19553400	chr16:19527835-19553400	1	+	19527881	19551271	789624	13	187,129,1648,131,178,140,117,102,117,74,63,60,2205,	0,4580,8104,12821,14051,14785,15042,16961,17258,17981,18576,20119,23360,
#Partially deleted in new
chr16	19527920	19536197	chr16:19527920-19536197	0	+	19527920	19536197	789624	2	102,258,	0,8019,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	19545141	19546565	chr16:19545141-19546565	0	+	19545141	19545141	8553170	2	69,749,	0,675,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	19546848	19551622	chr16:19546848-19551622	0	+	19546848	19546848	8553170	3	1166,86,427,	0,1666,4347,
#Partially deleted in new
chr16	19547731	19551477	chr16:19547731-19551477	0	+	19547731	19547731	8553170	2	869,282,	0,3464,
#Partially deleted in new
chr16	19555239	19579129	chr16:19555239-19579129	0	+	19569526	19579129	789624	6	81,100,168,118,25,78,	0,9611,14184,17884,19858,23812,
#Partially deleted in new
chr16	19555414	19701163	chr16:19555414-19701163	3	+	19555462	19700476	789624	31	332,100,168,123,25,77,129,85,60,97,48,94,78,123,47,112,117,54,81,63,86,81,64,99,78,115,140,166,119,147,786,	0,9436,14009,17704,19683,23637,26110,36375,46249,52763,53559,54907,60699,61271,70762,72279,73222,74352,77677,82179,84600,86981,89471,92369,94967,96561,113745,126810,135938,144087,144963,
#Partially deleted in new
chr16	19555414	19701124	chr16:19555414-19701124	1	+	19555462	19700476	789624	31	332,100,168,123,25,77,129,85,60,97,48,94,78,123,47,112,117,54,81,63,86,81,64,99,78,115,140,166,119,147,747,	0,9436,14009,17704,19683,23637,26110,36375,46249,52763,53559,54907,60699,61271,70762,72279,73222,74352,77677,82179,84600,86981,89471,92369,94967,96561,113745,126810,135938,144087,144963,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	19555414	19609022	chr16:19555414-19609022	0	+	19555462	19579118	789624	12	332,100,168,123,25,55,77,129,85,60,97,49,	0,9436,14009,17704,19683,22889,23637,26110,36375,46249,52763,53559,
#Partially deleted in new
chr16	19555415	19700687	chr16:19555415-19700687	1	+	19555462	19700476	789624	28	331,100,168,123,25,77,129,85,60,97,48,94,47,112,117,54,81,63,86,81,64,99,115,140,166,119,147,310,	0,9435,14008,17703,19682,23636,26109,36374,46248,52762,53558,54906,70761,72278,73221,74351,77676,82178,84599,86980,89470,92368,96560,113744,126809,135937,144086,144962,
#Partially deleted in new
chr16	19555719	19700689	chr16:19555719-19700689	1	+	19555729	19700476	789624	31	27,100,168,123,25,77,129,85,60,97,48,94,78,123,47,112,117,54,81,63,86,81,64,99,78,115,140,166,119,147,312,	0,9131,13704,17399,19378,23332,25805,36070,45944,52458,53254,54602,60394,60966,70457,71974,72917,74047,77372,81874,84295,86676,89166,92064,94662,96256,113440,126505,135633,143782,144658,
#Partially deleted in new
chr16	19555719	19573163	chr16:19555719-19573163	0	+	19555729	19569249	789624	4	27,100,348,45,	0,9131,13524,17399,
#Partially deleted in new
chr16	19555719	19573380	chr16:19555719-19573380	0	+	19555719	19555719	8553170	4	27,100,168,262,	0,9131,13704,17399,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	19555725	19618081	chr16:19555725-19618081	1	+	19555729	19616940	789624	14	21,100,168,123,25,77,129,85,60,97,48,94,78,1396,	0,9125,13698,17393,19372,23326,25799,36064,45938,52452,53248,54596,60388,60960,
#Partially deleted in new
chr16	19555725	19581608	chr16:19555725-19581608	1	+	19555729	19581546	789624	6	21,100,168,123,77,84,	0,9125,13698,17393,23326,25799,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	19575097	19582085	chr16:19575097-19582085	0	+	19575097	19581719	789624	2	25,561,	0,6427,
#Partially deleted in new
chr16	19578723	19701126	chr16:19578723-19701126	1	+	19578984	19700476	789624	25	405,130,60,97,48,94,78,123,47,112,117,54,81,63,86,81,64,99,78,115,140,166,119,147,749,	0,2801,22940,29454,30250,31598,37390,37962,47453,48970,49913,51043,54368,58870,61291,63672,66162,69060,71658,73252,90436,103501,112629,120778,121654,
#Partially deleted in new
chr16	19578723	19701126	chr16:19578723-19701126	1	+	19601692	19700476	789624	25	405,129,60,97,48,94,78,123,47,112,117,54,81,63,86,81,64,99,78,115,140,166,119,147,749,	0,2801,22940,29454,30250,31598,37390,37962,47453,48970,49913,51043,54368,58870,61291,63672,66162,69060,71658,73252,90436,103501,112629,120778,121654,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	19579398	19581621	chr16:19579398-19581621	0	+	19579398	19579398	8553170	2	444,97,	0,2126,
#Partially deleted in new
chr16	19591822	19610543	chr16:19591822-19610543	0	+	19591822	19591822	8553170	5	52,60,97,48,222,	0,9841,16355,17151,18499,
#Partially deleted in new
chr16	19601602	19616740	chr16:19601602-19616740	0	+	19601602	19601602	8553170	7	121,97,48,94,71,78,55,	0,6575,7371,8719,10125,14511,15083,
#Partially deleted in new
chr16	19601610	19627802	chr16:19601610-19627802	0	+	19601610	19601610	8553170	6	113,94,78,123,47,109,	0,8711,14503,15075,24566,26083,
#Partially deleted in new
chr16	19601622	19616809	chr16:19601622-19616809	0	+	19601622	19601622	8553170	6	101,97,48,94,78,124,	0,6555,7351,8699,14491,15063,
#Partially deleted in new
chr16	19607775	19626202	chr16:19607775-19626202	0	+	19610355	19626202	789624	7	86,97,48,94,78,123,26,	0,402,1198,2546,8338,8910,18401,
#Deleted in new
chr16	19607777	19608726	chr16:19607777-19608726	0	+	19607777	19607777	8553170	2	84,549,	0,400,
#Partially deleted in new
chr16	19607788	19616191	chr16:19607788-19616191	0	+	19607788	19607788	8553170	6	73,97,48,94,71,78,	0,389,1185,2533,3939,8325,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	19647846	19652691	chr16:19647846-19652691	0	+	19647846	19647846	8553170	4	36,78,115,337,	0,2535,4129,4508,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	19691455	19706793	chr16:19691455-19706793	0	+	19691455	19705301	789624	3	16,147,1678,	0,8046,13660,
#Deleted in new
chr16	19694034	19694428	chr16:19694034-19694428	3	-	19694034	19694034	8553170	1	394,	0,
#Partially deleted in new
chr16	19699375	19701120	chr16:19699375-19701120	0	+	19699375	19699375	8553170	2	273,743,	0,1002,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	19701933	19718234	chr16:19701933-19718234	3	-	19706909	19715035	789624	5	5288,78,69,920,77,	0,8575,9438,12184,16224,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	19706350	19715383	chr16:19706350-19715383	3	+	19706350	19706350	8553170	2	781,598,	0,8435,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	19706355	19712091	chr16:19706355-19712091	1	-	19706909	19711395	789624	4	866,78,69,298,	0,4153,5016,5438,
#Partially deleted in new
chr16	19707164	19714577	chr16:19707164-19714577	0	-	19707164	19714577	789624	3	57,78,460,	0,3344,6953,
#Partially deleted in new
chr16	19710259	19718235	chr16:19710259-19718235	0	-	19710259	19710259	8553170	4	327,69,920,78,	0,1112,3858,7898,
#Partially deleted in new
chr16	19714798	19718131	chr16:19714798-19718131	0	-	19714798	19715035	789624	2	239,781,	0,2552,
#Partially deleted in new
chr16	19716455	19857539	chr16:19716455-19857539	0	+	19718306	19827036	789624	8	87,793,65,130,98,85,112,1053,	0,1239,13974,17242,18897,72382,110570,140031,
#Partially deleted in new
chr16	19716455	19858467	chr16:19716455-19858467	3	+	19718306	19856548	789624	10	87,793,65,130,98,53,78,85,112,1981,	0,1239,13974,17242,18897,47392,47579,72382,110570,140031,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	19716455	19789238	chr16:19716455-19789238	0	+	19718306	19733801	789624	6	87,793,130,98,265,401,	0,1239,17242,18897,47392,72382,
#Partially deleted in new
chr16	19718278	19856641	chr16:19718278-19856641	0	+	19718306	19733801	789624	8	209,130,98,53,78,85,112,155,	0,15419,17074,45569,45756,70559,108747,138208,
#Partially deleted in new
chr16	19718279	19827190	chr16:19718279-19827190	1	+	19718306	19827184	789624	8	208,65,130,98,53,78,85,165,	0,12150,15418,17073,45568,45755,70558,108746,
#Partially deleted in new
chr16	19718282	19857539	chr16:19718282-19857539	0	+	19718282	19718282	8553170	7	205,65,130,265,85,112,1053,	0,12147,15415,45565,70555,108743,138204,
#Partially deleted in new
chr16	19718297	19735658	chr16:19718297-19735658	0	+	19718297	19718297	8553170	4	190,65,130,306,	0,12132,15400,17055,
#Partially deleted in new
chr16	19718314	19856736	chr16:19718314-19856736	0	+	19718314	19763849	789624	8	173,65,130,53,78,85,112,250,	0,12115,15383,45533,45720,70523,108711,138172,
#Partially deleted in new
chr16	19718326	19827075	chr16:19718326-19827075	0	+	19718326	19736159	789624	9	161,65,130,98,81,53,78,85,50,	0,12103,15371,17026,17785,45521,45708,70511,108699,
#Partially deleted in new
chr16	19718415	19734033	chr16:19718415-19734033	0	+	19718415	19718415	8553170	3	72,65,336,	0,12014,15282,
#Deleted in new
chr16	19735352	19735773	chr16:19735352-19735773	0	+	19735352	19735352	8553170	2	98,236,	0,185,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	19761129	19856670	chr16:19761129-19856670	0	+	19761129	19761129	8553170	7	109,64,53,78,85,112,184,	0,227,2718,2905,27708,65896,95357,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	19761171	19766099	chr16:19761171-19766099	3	-	19761171	19761171	8553170	3	386,169,131,	0,676,4797,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	19761188	19764337	chr16:19761188-19764337	0	+	19761188	19761188	8553170	4	50,64,53,303,	0,168,2659,2846,
#Partially deleted in new
chr16	19761349	19766044	chr16:19761349-19766044	0	-	19761349	19761349	8553170	3	208,189,76,	0,498,4619,
#Partially deleted in new
chr16	19761559	19766070	chr16:19761559-19766070	0	-	19761559	19761559	8553170	2	457,102,	0,4409,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	19819503	19819628	chr16:19819503-19819628	7	-	19819503	19819503	16724991	1	125,	0,
#Partially deleted in new
chr16	19827063	19857585	chr16:19827063-19857585	0	+	19827063	19857482	789624	3	74,75,131,	0,29423,30391,
#Partially deleted in new
chr16	19856690	19884917	chr16:19856690-19884917	3	-	19860499	19872845	789624	4	3854,137,1031,191,	0,5146,15125,28036,
#Deleted in new
chr16	19857298	19858046	chr16:19857298-19858046	0	-	19857298	19857298	8553170	2	445,46,	0,702,
#Partially deleted in new
chr16	19858497	19872845	chr16:19858497-19872845	1	-	19858497	19872845	789624	3	48,137,1030,	0,3339,13318,
#Deleted in new
chr16	19858970	19862340	chr16:19858970-19862340	0	-	19858970	19858970	8553170	2	1574,504,	0,2866,
#Partially deleted in new
chr16	19858970	19886167	chr16:19858970-19886167	1	-	19860499	19872845	789624	4	1574,137,1031,242,	0,2866,12845,26955,
#Partially deleted in new
chr16	19860407	19885727	chr16:19860407-19885727	1	-	19860499	19872845	789624	4	137,137,1031,525,	0,1429,11408,24795,
#Partially deleted in new
chr16	19872312	19882360	chr16:19872312-19882360	0	-	19872312	19872845	789624	2	534,229,	0,9819,
#Partially deleted in new
chr16	19872400	19884904	chr16:19872400-19884904	0	-	19872400	19872845	789624	4	446,24,170,178,	0,8569,9731,12326,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	19872575	19886155	chr16:19872575-19886155	0	-	19872575	19872845	789624	3	271,67,230,	0,2156,13350,
#Partially deleted in new
chr16	19872586	19884864	chr16:19872586-19884864	0	-	19872586	19872845	789624	3	260,170,138,	0,9545,12140,
#Partially deleted in new
chr16	19872768	19885525	chr16:19872768-19885525	0	-	19872768	19872845	789624	3	78,170,323,	0,9363,12434,
#Partially deleted in new
chr16	20031484	20073917	chr16:20031484-20073917	3	-	20031734	20073616	789624	2	1185,428,	0,42005,
#Partially deleted in new
chr16	20031658	20073767	chr16:20031658-20073767	0	-	20070996	20073616	789624	3	1011,99,278,	0,39265,41831,
#Deleted in new
chr16	20155647	20158391	chr16:20155647-20158391	7	+	20155647	20155647	16724991	1	2744,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	20208924	20209525	chr16:20208924-20209525	3	+	20208924	20208924	8553170	2	79,273,	0,328,
#Deleted in new
chr16	20238971	20239247	chr16:20238971-20239247	7	-	20238971	20238971	16724991	1	276,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	20309571	20327580	chr16:20309571-20327580	3	-	20311222	20326431	789624	11	1710,45,85,163,246,149,212,111,441,130,114,	0,5085,6384,7641,8613,10048,10690,13297,14244,16766,17895,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	20310488	20327507	chr16:20310488-20327507	1	-	20311222	20326431	789624	10	793,45,85,163,246,149,212,111,130,41,	0,4168,5467,6724,7696,9131,9773,12380,15849,16978,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	20310488	20327808	chr16:20310488-20327808	1	-	20311222	20326431	789624	11	793,45,85,163,246,149,212,111,9,130,342,	0,4168,5467,6724,7696,9131,9773,12380,12892,15849,16978,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	20310488	20327507	chr16:20310488-20327507	1	-	20311222	20326431	789624	12	793,45,85,163,246,149,212,111,9,441,130,41,	0,4168,5467,6724,7696,9131,9773,12380,12892,13327,15849,16978,
#Partially deleted in new
chr16	20318401	20323753	chr16:20318401-20323753	0	-	20318401	20318401	8553170	5	29,149,212,111,69,	0,1218,1860,4467,5283,
#Partially deleted in new
chr16	20319750	20327426	chr16:20319750-20327426	0	-	20319750	20326431	789624	5	18,212,111,130,102,	0,511,3118,6587,7574,
#Partially deleted in new
chr16	20320359	20326418	chr16:20320359-20326418	0	-	20326290	20326418	789624	3	114,111,163,	0,2509,5896,
#Partially deleted in new
chr16	20320432	20327507	chr16:20320432-20327507	0	-	20320432	20324086	789624	4	41,111,387,41,	0,2436,3383,7034,
#Partially deleted in new
chr16	20320434	20327507	chr16:20320434-20327507	0	-	20320434	20326431	789624	5	39,111,246,130,41,	0,2434,3381,5903,7032,
#Partially deleted in new
chr16	20323966	20326912	chr16:20323966-20326912	0	-	20323966	20326431	789624	3	290,130,152,	0,2371,2794,
#Partially deleted in new
chr16	20324046	20327508	chr16:20324046-20327508	0	-	20324046	20324046	8553170	3	210,212,42,	0,2209,3420,
#Partially deleted in new
chr16	20333051	20352878	chr16:20333051-20352878	1	-	20333313	20350737	0	11	324,39,82,163,246,149,209,108,777,190,190,	0,2430,3594,4239,8039,10972,13074,15171,15384,17598,19637,
#Partially deleted in new
chr16	20333051	20352710	chr16:20333051-20352710	1	-	20333313	20350737	0	12	324,39,82,163,246,149,209,108,777,99,190,22,	0,2430,3594,4239,8039,10972,13074,15171,15384,16719,17598,19637,
#Partially deleted in new
chr16	20333051	20352800	chr16:20333051-20352800	1	-	20333313	20352733	789624	11	324,39,82,163,246,149,209,108,777,190,112,	0,2430,3594,4239,8039,10972,13074,15171,15384,17598,19637,
#Partially deleted in new
chr16	20333068	20356301	chr16:20333068-20356301	3	-	20333313	20350737	0	11	307,39,82,163,246,149,209,108,777,127,108,	0,2413,3577,4222,8022,10955,13057,15154,15367,17581,23125,
#Partially deleted in new
chr16	20333338	20342509	chr16:20333338-20342509	0	-	20333338	20333338	8553170	6	37,39,82,163,246,96,	0,2143,3307,3952,7752,9075,
#Partially deleted in new
chr16	20348885	20352710	chr16:20348885-20352710	0	-	20348885	20350737	789624	4	327,69,127,22,	0,915,1764,3803,
#Partially deleted in new
chr16	20348924	20352715	chr16:20348924-20352715	0	-	20348924	20350737	789624	3	288,127,174,	0,1725,3617,
#Partially deleted in new
chr16	20348970	20352878	chr16:20348970-20352878	0	-	20348970	20352733	789624	3	242,127,190,	0,1679,3718,
#Partially deleted in new
chr16	20348979	20351171	chr16:20348979-20351171	0	-	20348979	20350737	789624	4	233,162,190,152,	0,728,1670,2040,
#Partially deleted in new
chr16	20348992	20352715	chr16:20348992-20352715	0	-	20348992	20350737	789624	4	220,127,152,27,	0,1657,2027,3696,
#Partially deleted in new
chr16	20349035	20352711	chr16:20349035-20352711	0	-	20349035	20350737	789624	3	177,190,170,	0,1614,3506,
#Partially deleted in new
chr16	20349042	20351312	chr16:20349042-20351312	0	-	20349042	20350737	789624	3	170,190,183,	0,1607,2087,
#Deleted in new
chr16	20350649	20351438	chr16:20350649-20351438	0	-	20350649	20350737	789624	2	127,419,	0,370,
#Partially deleted in new
chr16	20359169	20404737	chr16:20359169-20404737	3	-	20359318	20399300	0	12	398,90,179,121,198,126,111,138,134,207,209,242,	0,1398,3234,6250,10322,13632,13842,15652,16898,25475,39929,45326,
#Partially deleted in new
chr16	20385956	20391164	chr16:20385956-20391164	3	+	20385956	20385956	8553170	2	58,557,	0,4651,
#Partially deleted in new
chr16	20409533	20441336	chr16:20409533-20441336	3	+	20411484	20440427	789624	14	132,219,211,208,144,154,80,124,81,102,128,100,120,993,	0,1936,8525,9694,11724,14382,18254,20144,21459,21686,27518,27734,30266,30810,
#Partially deleted in new
chr16	20409533	20419795	chr16:20409533-20419795	1	+	20411484	20419439	789624	4	132,219,211,568,	0,1936,8525,9694,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	20409545	20412205	chr16:20409545-20412205	1	+	20411484	20411709	789624	2	120,736,	0,1924,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	20421055	20431059	chr16:20421055-20431059	0	+	20421055	20421055	8553170	5	346,154,80,124,67,	0,2860,6732,8622,9937,
#Partially deleted in new
chr16	20421176	20431043	chr16:20421176-20431043	0	+	20421176	20421176	8553170	4	225,80,124,51,	0,6611,8501,9816,
#Partially deleted in new
chr16	20421273	20431043	chr16:20421273-20431043	0	+	20421273	20429734	789624	4	128,154,124,51,	0,2642,8404,9719,
#Partially deleted in new
chr16	20431042	20439919	chr16:20431042-20439919	0	+	20431042	20431042	8553170	4	31,102,316,120,	0,177,6009,8757,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	20451514	20481147	chr16:20451514-20481147	0	+	20451514	20451514	8553170	12	167,185,211,208,144,154,80,124,81,102,128,326,	0,8592,14002,17997,19558,20021,23847,24135,25854,27061,29058,29307,
#Partially deleted in new
chr16	20451571	20486846	chr16:20451571-20486846	1	+	20465576	20486678	789624	13	110,211,208,144,154,80,124,81,102,128,100,120,273,	0,13945,17940,19501,19964,23790,24078,25797,27004,29001,29250,31486,35002,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	20451575	20487667	chr16:20451575-20487667	3	+	20460114	20486678	0	14	106,185,211,208,144,154,80,124,81,102,128,100,120,1094,	0,8531,13941,17936,19497,19960,23786,24074,25793,27000,28997,29246,31482,34998,
#Partially deleted in new
chr16	20451575	20481010	chr16:20451575-20481010	0	+	20451575	20451575	8553170	11	106,211,208,144,154,80,124,81,102,128,189,	0,13941,17936,19497,19960,23786,24074,25793,27000,28997,29246,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	20451601	20486796	chr16:20451601-20486796	1	+	20460114	20486678	0	15	80,382,185,211,208,144,154,80,124,81,102,128,100,120,223,	0,483,8505,13915,17910,19471,19934,23760,24048,25767,26974,28971,29220,31456,34972,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	20451603	20453885	chr16:20451603-20453885	0	+	20451603	20451603	8553170	3	78,86,643,	0,777,1639,
#Partially deleted in new
chr16	20451606	20475455	chr16:20451606-20475455	0	+	20460114	20470846	789624	8	75,185,211,208,143,144,154,94,	0,8500,13910,17905,19209,19466,19929,23755,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	20460103	20487667	chr16:20460103-20487667	1	+	20460114	20486678	0	13	188,211,208,144,154,80,124,81,102,128,100,120,1094,	0,5413,9408,10969,11432,15258,15546,17265,18472,20469,20718,22954,26470,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	20471586	20474223	chr16:20471586-20474223	0	+	20471586	20471586	8553170	2	103,266,	0,2371,
#Partially deleted in new
chr16	20475366	20487211	chr16:20475366-20487211	0	+	20475366	20475366	8553170	7	1293,81,102,128,100,120,638,	0,2002,3209,5206,5455,7691,11207,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	20476518	20482134	chr16:20476518-20482134	0	+	20476518	20476518	8553170	4	931,102,128,1313,	0,2057,4054,4303,
#Partially deleted in new
chr16	20482269	20486881	chr16:20482269-20486881	0	+	20482269	20482269	8553170	2	908,308,	0,4304,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	20487701	20489659	chr16:20487701-20489659	3	+	20487701	20487701	8553170	1	1958,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	20536225	20576367	chr16:20536225-20576367	3	-	20537257	20564845	789624	14	1137,120,100,128,102,81,124,80,154,144,208,211,185,161,	0,4428,6688,6909,8931,10168,11836,12168,15918,17551,19043,23011,28443,39981,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	20536262	20564856	chr16:20536262-20564856	1	-	20537257	20564845	789624	13	1100,120,100,128,102,81,124,80,154,144,208,211,188,	0,4391,6651,6872,8894,10131,11799,12131,15881,17514,19006,22974,28406,
#Partially deleted in new
chr16	20536723	20548468	chr16:20536723-20548468	0	-	20536723	20536723	8553170	7	639,120,100,128,102,81,1293,	0,3930,6190,6411,8433,9670,10452,
#Partially deleted in new
chr16	20537090	20576316	chr16:20537090-20576316	1	-	20537257	20559387	789624	13	272,120,100,128,102,81,124,80,154,144,208,211,110,	0,3563,5823,6044,8066,9303,10971,11303,15053,16686,18178,22146,39116,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	20537139	20576286	chr16:20537139-20576286	1	-	20537257	20564845	789624	15	223,120,100,128,102,81,124,80,154,144,208,211,185,382,80,	0,3514,5774,5995,8017,9254,10922,11254,15004,16637,18129,22097,27529,38282,39067,
#Partially deleted in new
chr16	20537184	20545170	chr16:20537184-20545170	0	-	20537257	20545170	789624	4	178,111,102,14,	0,3469,5976,7972,
#Partially deleted in new
chr16	20537291	20541316	chr16:20537291-20541316	0	-	20537291	20537291	8553170	2	71,663,	0,3362,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	20541700	20547316	chr16:20541700-20547316	0	-	20541700	20541700	8553170	4	1313,128,102,923,	0,1434,3456,4693,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	20542687	20576373	chr16:20542687-20576373	0	-	20542687	20542687	8553170	12	326,128,102,81,124,80,154,144,208,211,185,167,	0,447,2469,3706,5374,5706,9456,11089,12581,16549,21981,33519,
#Partially deleted in new
chr16	20542824	20576312	chr16:20542824-20576312	0	-	20542824	20542824	8553170	11	189,128,102,81,124,80,154,144,208,211,106,	0,310,2332,3569,5237,5569,9319,10952,12444,16412,33382,
#Partially deleted in new
chr16	20544527	20553823	chr16:20544527-20553823	0	-	20544807	20553823	789624	7	295,102,81,124,80,154,47,	0,629,1866,3534,3866,7616,9249,
#Partially deleted in new
chr16	20548379	20576281	chr16:20548379-20576281	0	-	20554146	20564845	789624	8	94,154,144,143,208,211,185,75,	0,3764,5397,5655,6889,10857,16289,27827,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	20549610	20555294	chr16:20549610-20555294	0	-	20549752	20555294	789624	4	268,154,144,26,	0,2533,4166,5658,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	20574308	20576340	chr16:20574308-20576340	0	-	20574308	20574308	8553170	2	337,134,	0,1898,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	20580998	20586640	chr16:20580998-20586640	3	+	20580998	20580998	8553170	3	23,117,339,	0,780,5303,
#Partially deleted in new
chr16	20586549	20607107	chr16:20586549-20607107	7	-	20586549	20586549	16724991	12	993,120,100,128,101,81,124,80,154,144,208,205,	0,1417,3972,4160,5752,6006,7280,9215,13013,15748,17712,20353,
#Partially deleted in new
chr16	20610242	20775920	chr16:20610242-20775920	0	+	20770034	20775920	789624	5	68,94,44,270,82,	0,139667,145330,159741,165596,
#Deleted in new
chr16	20616408	20616532	chr16:20616408-20616532	7	-	20616408	20616408	16724991	1	124,	0,
#Partially deleted in new
chr16	20618204	20620758	chr16:20618204-20620758	7	-	20618204	20618204	16724991	2	77,53,	0,2501,
#Partially deleted in new
chr16	20623236	20691256	chr16:20623236-20691256	1	-	20623485	20691188	789624	13	336,120,100,128,102,81,124,80,160,141,208,211,260,	0,859,2186,3952,13502,14134,17224,38557,46590,48294,59019,61956,67760,
#Partially deleted in new
chr16	20623236	20676161	chr16:20623236-20676161	0	-	20623236	20623236	8553170	10	336,87,100,61,713,124,80,160,141,37,	0,859,2186,4019,13502,17224,38557,46590,48294,52888,
#Partially deleted in new
chr16	20623387	20691256	chr16:20623387-20691256	0	-	20674096	20691188	789624	11	185,120,61,81,80,164,141,57,208,211,260,	0,708,3868,13983,38406,46439,48143,50656,58868,61805,67609,
#Partially deleted in new
chr16	20623425	20669855	chr16:20623425-20669855	0	-	20623485	20669855	789624	8	147,120,100,128,81,124,80,29,	0,670,1997,3763,13945,17035,38368,46401,
#Partially deleted in new
chr16	20623485	20697744	chr16:20623485-20697744	3	-	20623485	20691188	789624	14	87,120,100,128,102,81,124,80,160,141,208,211,243,109,	0,610,1937,3703,13253,13885,16975,38308,46341,48045,58770,61707,67511,74150,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	20674530	20682176	chr16:20674530-20682176	0	+	20674530	20674530	8553170	2	292,3019,	0,4627,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	20674607	20770191	chr16:20674607-20770191	0	+	20770034	20770191	789624	4	215,94,44,208,	0,75302,80965,95376,
#Partially deleted in new
chr16	20682404	20698890	chr16:20682404-20698890	0	-	20682404	20691188	789624	5	59,211,239,153,39,	0,2788,8592,15231,16447,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	20702815	20741815	chr16:20702815-20741815	0	-	20736879	20741739	0	8	1094,168,112,35,427,249,175,307,	0,15501,18326,28734,34044,34892,36081,38693,
#Partially deleted in new
chr16	20711472	20732990	chr16:20711472-20732990	7	+	20711472	20711472	16724991	11	208,144,158,80,124,80,102,128,100,121,84,	0,6877,7754,13889,15870,16690,16915,17757,17981,20147,21434,
#Deleted in new
chr16	20720993	20722281	chr16:20720993-20722281	7	-	20720993	20720993	16724991	1	1288,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	20733663	20742084	chr16:20733663-20742084	3	-	20736879	20741739	0	5	2695,427,249,175,576,	0,3196,4044,5233,7845,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	20735374	20741796	chr16:20735374-20741796	1	-	20736879	20741739	0	4	1912,249,175,288,	0,2333,3522,6134,
#Deleted in new
chr16	20736811	20738272	chr16:20736811-20738272	0	-	20736811	20736811	8553170	2	475,565,	0,896,
#Partially deleted in new
chr16	20737088	20741803	chr16:20737088-20741803	0	-	20738237	20741739	789624	5	198,249,182,175,295,	0,619,999,1808,4420,
#Partially deleted in new
chr16	20738743	20741815	chr16:20738743-20741815	0	-	20738743	20738743	8553170	2	328,307,	0,2765,
#Partially deleted in new
chr16	20749417	20770109	chr16:20749417-20770109	0	+	20770034	20770109	789624	3	586,44,126,	0,6155,20566,
#Partially deleted in new
chr16	20763701	20797581	chr16:20763701-20797581	3	+	20770034	20796972	789624	14	424,270,211,208,144,157,80,124,81,102,128,100,120,696,	0,6282,12137,13671,17012,17272,18006,21282,22376,26885,28300,28534,32668,33184,
#Partially deleted in new
chr16	20764039	20786314	chr16:20764039-20786314	1	+	20770034	20786251	789624	9	86,270,211,208,144,157,80,124,237,	0,5944,11799,13333,16674,16934,17668,20944,22038,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	20764682	20777417	chr16:20764682-20777417	0	+	20770034	20777417	789624	4	54,270,211,45,	0,5301,11156,12690,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	20780192	20806473	chr16:20780192-20806473	1	-	20780641	20806430	789624	11	542,79,83,89,82,101,157,128,84,68,66,	0,9286,10657,19070,19764,20109,21010,22603,23240,23410,26215,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	20783250	20796992	chr16:20783250-20796992	0	+	20783250	20783250	8553170	8	81,124,81,102,128,100,120,107,	0,1733,2827,7336,8751,8985,13119,13635,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	20783263	20786152	chr16:20783263-20786152	0	+	20783263	20783263	8553170	3	328,124,75,	0,1720,2814,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	20784508	20784615	chr16:20784508-20784615	3	+	20784508	20784508	8553170	1	107,	0,
#Partially deleted in new
chr16	20785049	20796929	chr16:20785049-20796929	0	+	20785049	20796929	789624	5	58,81,102,120,44,	0,1028,5537,11320,11836,
#Partially deleted in new
chr16	20790777	20800753	chr16:20790777-20800753	0	-	20790777	20790777	8553170	4	155,89,82,452,	0,8485,9179,9524,
#Deleted in new
chr16	20796077	20797156	chr16:20796077-20797156	0	+	20796077	20796077	8553170	3	47,120,271,	0,292,808,
#Deleted in new
chr16	20796237	20797153	chr16:20796237-20797153	0	+	20796237	20796237	8553170	2	252,268,	0,648,
#Partially deleted in new
chr16	20796339	20900349	chr16:20796339-20900349	1	-	20797723	20802819	789624	10	2728,89,82,101,157,128,84,68,74,146,	0,2923,3617,3962,4863,6456,7093,7263,99968,103864,
#Partially deleted in new
chr16	20796343	20806473	chr16:20796343-20806473	3	-	20797723	20806430	789624	9	2724,89,82,101,157,128,84,68,66,	0,2919,3613,3958,4859,6452,7089,7259,10064,
#Deleted in new
chr16	20796343	20800189	chr16:20796343-20800189	0	-	20796343	20796343	8553170	1	3846,	0,
#Partially deleted in new
chr16	20796343	20806476	chr16:20796343-20806476	1	-	20798103	20806430	789624	9	1868,89,82,101,157,128,84,68,69,	0,2919,3613,3958,4859,6452,7089,7259,10064,
#Partially deleted in new
chr16	20797183	20806472	chr16:20797183-20806472	0	-	20800027	20806430	789624	8	1884,111,82,157,128,84,68,65,	0,2079,2773,4019,5612,6249,6419,9224,
#Partially deleted in new
chr16	20802902	20806469	chr16:20802902-20806469	0	-	20802902	20802902	8553170	4	21,79,68,62,	0,530,700,3505,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	20802917	20806119	chr16:20802917-20806119	0	-	20802917	20802917	8553170	4	6,84,68,405,	0,515,685,2797,
#Partially deleted in new
chr16	20802917	20806450	chr16:20802917-20806450	0	-	20802917	20802917	8553170	4	6,79,68,404,	0,515,685,3129,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	20803424	20806105	chr16:20803424-20806105	0	-	20803424	20803424	8553170	3	87,68,391,	0,178,2290,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	20803467	20806450	chr16:20803467-20806450	0	-	20803467	20803467	8553170	3	49,68,441,	0,135,2542,
#Partially deleted in new
chr16	20806428	20821802	chr16:20806428-20821802	0	+	20806953	20821802	789624	6	62,140,113,127,97,41,	0,523,6761,8498,9687,15333,
#Partially deleted in new
chr16	20806444	20814982	chr16:20806444-20814982	0	+	20806953	20814982	789624	4	277,140,113,56,	0,507,6745,8482,
#Partially deleted in new
chr16	20806495	20849639	chr16:20806495-20849639	0	+	20806953	20814991	789624	19	210,140,113,69,97,141,116,139,95,103,104,121,105,138,93,217,188,119,241,	0,456,6694,8489,9620,15266,19337,20562,20857,21939,25660,26507,33259,33835,37438,38133,38558,39725,42903,
#Partially deleted in new
chr16	20806498	20849668	chr16:20806498-20849668	3	+	20806953	20849480	789624	20	207,140,113,127,97,141,89,116,139,95,103,104,121,105,138,93,217,188,119,270,	0,453,6691,8428,9617,15263,17940,19334,20559,20854,21936,25657,26504,33256,33832,37435,38130,38555,39722,42900,
#Partially deleted in new
chr16	20806520	20849665	chr16:20806520-20849665	1	+	20806953	20849480	789624	19	185,140,113,127,97,141,89,116,139,95,103,104,121,105,138,217,188,119,267,	0,431,6669,8406,9595,15241,17918,19312,20537,20832,21914,25635,26482,33234,33810,38108,38533,39700,42878,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	20806526	20821834	chr16:20806526-20821834	0	+	20814987	20821834	789624	6	179,93,113,69,97,73,	0,2261,6663,8458,9589,15235,
#Partially deleted in new
chr16	20806551	20827186	chr16:20806551-20827186	0	+	20814987	20827186	789624	8	170,113,69,97,141,89,116,129,	0,6638,8433,9564,15210,17887,19281,20506,
#Partially deleted in new
chr16	20806616	20825897	chr16:20806616-20825897	0	+	20806616	20806616	8553170	6	89,113,69,97,141,65,	0,6573,8368,9499,15145,19216,
#Partially deleted in new
chr16	20806623	20832199	chr16:20806623-20832199	0	+	20825898	20832199	789624	7	82,141,116,139,95,103,44,	0,15138,19209,20434,20729,21811,25532,
#Partially deleted in new
chr16	20806656	20821771	chr16:20806656-20821771	0	+	20806953	20821771	789624	6	79,140,113,127,97,10,	0,295,6533,8270,9459,15105,
#Partially deleted in new
chr16	20806662	20828535	chr16:20806662-20828535	0	+	20806953	20821777	789624	9	59,140,113,141,89,116,139,95,101,	0,289,6527,15099,17776,19170,20395,20690,21772,
#Partially deleted in new
chr16	20806697	20849480	chr16:20806697-20849480	1	+	20806953	20849480	789624	20	120,140,113,127,97,141,89,116,139,95,103,104,121,105,138,93,217,188,119,82,	0,254,6492,8229,9418,15064,17741,19135,20360,20655,21737,25458,26305,33057,33633,37236,37931,38356,39523,42701,
#Partially deleted in new
chr16	20806707	20814992	chr16:20806707-20814992	0	+	20806953	20814992	789624	3	384,113,66,	0,6482,8219,
#Partially deleted in new
chr16	20806756	20825906	chr16:20806756-20825906	0	+	20806756	20806756	8553170	7	61,140,113,127,97,141,74,	0,195,6433,8170,9359,15005,19076,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	20807156	20825871	chr16:20807156-20825871	0	+	20814987	20825871	789624	7	207,113,127,97,141,89,39,	0,6033,7770,8959,14605,17282,18676,
#Partially deleted in new
chr16	20821036	20828535	chr16:20821036-20828535	0	+	20821036	20821036	8553170	7	34,141,89,116,139,95,101,	0,725,3402,4796,6021,6316,7398,
#Deleted in new
chr16	20823442	20823537	chr16:20823442-20823537	3	+	20823442	20823442	8553170	1	95,	0,
#Deleted in new
chr16	20825561	20827186	chr16:20825561-20827186	0	+	20825561	20825561	8553170	2	387,129,	0,1496,
#Partially deleted in new
chr16	20828523	20845076	chr16:20828523-20845076	0	+	20828523	20845076	789624	6	14,104,121,138,217,23,	0,3632,4479,11807,16105,16530,
#Partially deleted in new
chr16	20839852	20844662	chr16:20839852-20844662	0	+	20839852	20839852	8553170	3	616,93,34,	0,4081,4776,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	20854924	20900384	chr16:20854924-20900384	3	-	20859885	20862538	0	3	5445,536,181,	0,7183,45279,
#Partially deleted in new
chr16	20858995	20868980	chr16:20858995-20868980	1	-	20859885	20862538	0	3	1374,536,86,	0,3112,9899,
#Deleted in new
chr16	20899867	20900491	chr16:20899867-20900491	0	+	20899867	20899867	8553170	2	137,363,	0,261,
#Partially deleted in new
chr16	20899901	20924263	chr16:20899901-20924263	1	+	20915555	20924116	789624	5	103,238,159,93,264,	0,396,15654,20220,24098,
#Partially deleted in new
chr16	20900234	20925004	chr16:20900234-20925004	1	+	20924014	20924116	789624	3	301,93,1005,	0,19887,23765,
#Partially deleted in new
chr16	20900234	20925004	chr16:20900234-20925004	3	+	20915555	20924116	789624	4	301,159,93,1005,	0,15321,19887,23765,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	20900410	20921463	chr16:20900410-20921463	0	+	20915555	20920286	789624	4	125,159,485,162,	0,15145,19711,20891,
#Partially deleted in new
chr16	20900449	20924116	chr16:20900449-20924116	1	+	20915555	20924116	789624	6	86,232,82,159,93,117,	0,2036,10733,15106,19672,23550,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	20900490	20922007	chr16:20900490-20922007	0	+	20915555	20920286	789624	5	45,232,159,553,706,	0,1995,15065,19631,20811,
#Partially deleted in new
chr16	20900665	20924381	chr16:20900665-20924381	1	+	20924014	20924116	789624	4	224,232,93,382,	0,1820,19456,23334,
#Partially deleted in new
chr16	20900752	20925004	chr16:20900752-20925004	1	+	20915555	20924116	789624	5	137,232,159,93,1005,	0,1733,14803,19369,23247,
#Partially deleted in new
chr16	20900798	20924116	chr16:20900798-20924116	1	+	20915555	20924116	789624	4	91,159,93,117,	0,14757,19323,23201,
#Partially deleted in new
chr16	20901103	20925006	chr16:20901103-20925006	1	+	20915555	20924116	789624	6	86,232,82,159,93,1007,	0,1382,10079,14452,19018,22896,
#Partially deleted in new
chr16	20933110	21159441	chr16:20933110-21159441	3	-	20933153	21159441	789624	62	397,138,205,143,168,155,117,245,226,2142,199,183,217,194,639,144,157,124,180,295,104,246,130,106,101,242,112,135,220,92,177,114,109,199,115,111,93,202,137,180,117,115,92,212,145,154,82,185,179,106,115,115,180,196,126,196,190,175,73,226,105,117,	0,2237,3538,8290,11385,15372,19322,21702,26068,30173,36681,42122,46219,49610,51966,54194,54582,54831,64172,67113,69993,86513,88860,91485,93916,97934,100863,103603,104650,106741,108916,116458,116799,118559,121309,124975,127153,129371,134172,136304,137599,142336,148525,153738,164244,165505,171360,173379,178515,178882,184092,187629,188834,192064,194576,201148,203213,207425,208189,212070,212873,226214,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr16	20996858	21063000	chr16:20996858-21063000	0	-	20996858	20996858	8553170	21	604,295,104,246,130,106,101,242,112,135,220,92,177,114,109,199,115,111,93,202,229,	0,3365,6245,22765,25112,27737,30168,34186,37115,39855,40902,42993,45168,52710,53051,54811,57561,61227,63405,65623,65913,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	21019146	21039863	chr16:21019146-21039863	0	-	21019146	21019146	8553170	8	723,106,101,242,112,135,220,12,	0,5449,7880,11898,14827,17567,18614,20705,
#Partially deleted in new
chr16	21103901	21150811	chr16:21103901-21150811	0	-	21103901	21103901	8553170	16	693,185,179,106,137,180,196,126,196,190,175,73,226,105,245,61,	0,2588,7724,8091,13301,18043,21273,23785,30357,32422,36634,37398,41279,42082,46388,46849,
#Partially deleted in new
chr16	21120757	21130108	chr16:21120757-21130108	3	+	21120757	21120757	8553170	3	84,194,127,	0,8462,9224,
#Partially deleted in new
chr16	21134148	21136572	chr16:21134148-21136572	0	-	21134148	21134148	8553170	2	306,249,	0,2175,
#Partially deleted in new
chr16	21140207	21150807	chr16:21140207-21150807	0	-	21140207	21140207	8553170	6	503,73,226,105,245,57,	0,1092,4973,5776,10082,10543,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	21158376	21180616	chr16:21158376-21180616	3	+	21161182	21179556	789624	5	370,194,169,139,1142,	0,2708,12060,15633,21098,
#Partially deleted in new
chr16	21158660	21179609	chr16:21158660-21179609	1	+	21161182	21179482	789624	4	86,194,169,135,	0,2424,11776,20814,
#Partially deleted in new
chr16	21158673	21173362	chr16:21158673-21173362	0	+	21158673	21158673	8553170	4	73,301,169,38,	0,2304,11763,14651,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	21158678	21180609	chr16:21158678-21180609	1	+	21161182	21179556	789624	5	68,301,169,139,1135,	0,2299,11758,15331,20796,
#Partially deleted in new
chr16	21158688	21180220	chr16:21158688-21180220	1	+	21161182	21179556	789624	6	58,194,72,169,139,746,	0,2396,8151,11748,15321,20786,
#Partially deleted in new
chr16	21158704	21179612	chr16:21158704-21179612	1	+	21161182	21179556	789624	6	42,31,194,169,139,138,	0,2273,2380,11732,15305,20770,
#Partially deleted in new
chr16	21158709	21166882	chr16:21158709-21166882	0	+	21161182	21166882	789624	4	37,31,194,43,	0,2268,2375,8130,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	21170471	21180505	chr16:21170471-21180505	0	+	21170471	21177158	789624	4	134,139,191,1031,	0,3538,6665,9003,
#Partially deleted in new
chr16	21194846	21205977	chr16:21194846-21205977	3	+	21194846	21194846	8553170	4	62,156,122,233,	0,2666,2986,10898,
#Partially deleted in new
chr16	21197449	21211547	chr16:21197449-21211547	1	-	21197479	21211547	789624	19	173,84,84,97,136,190,98,92,188,127,182,97,165,45,153,95,84,89,62,	0,316,1329,2120,2293,3919,4256,4482,4654,5675,6580,6858,7970,8281,9388,12181,12659,13857,14036,
#Partially deleted in new
chr16	21197451	21214510	chr16:21197451-21214510	3	-	21197479	21211547	789624	20	171,84,84,97,136,190,125,92,188,127,182,97,165,45,153,95,84,89,261,284,	0,314,1327,2118,2291,3917,4254,4480,4652,5673,6578,6856,7968,8279,9386,12179,12657,13855,14034,16775,
#Deleted in new
chr16	21201777	21202289	chr16:21201777-21202289	0	-	21201777	21201777	8553170	2	53,358,	0,154,
#Partially deleted in new
chr16	21203790	21211574	chr16:21203790-21211574	0	-	21203790	21203790	8553170	9	421,97,165,45,153,95,84,89,89,	0,517,1629,1940,3047,5840,6318,7516,7695,
#Partially deleted in new
chr16	21205565	21211559	chr16:21205565-21211559	0	-	21205565	21205565	8553170	6	19,45,153,562,89,74,	0,165,1272,4065,5741,5920,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	21233664	21253845	chr16:21233664-21253845	3	+	21233737	21250820	789624	2	237,4115,	0,16066,
#Partially deleted in new
chr16	21238873	21278275	chr16:21238873-21278275	0	-	21268675	21278251	789624	10	72,77,85,122,184,138,102,63,154,194,	0,5118,22380,23163,28680,29673,30916,36658,38557,39208,
#Partially deleted in new
chr16	21243871	21262158	chr16:21243871-21262158	0	-	21244039	21262158	789624	4	197,57,85,122,	0,14917,17382,18165,
#Partially deleted in new
chr16	21258517	21278960	chr16:21258517-21278960	1	-	21258780	21278251	0	9	328,85,122,184,102,63,154,255,107,	0,2736,3519,9036,11272,17014,18913,19564,20336,
#Deleted in new
chr16	21261082	21262336	chr16:21261082-21262336	0	-	21261082	21261082	8553170	2	256,300,	0,954,
#Partially deleted in new
chr16	21261291	21278245	chr16:21261291-21278245	0	-	21261291	21261291	8553170	6	867,184,102,63,127,164,	0,6262,8498,14240,16139,16790,
#Partially deleted in new
chr16	21269856	21278525	chr16:21269856-21278525	0	-	21269856	21278251	789624	4	35,63,154,444,	0,5675,7574,8225,
#Partially deleted in new
chr16	21278174	21284104	chr16:21278174-21284104	0	-	21278174	21278251	789624	2	162,295,	0,5635,
#Partially deleted in new
chr16	21278720	21283712	chr16:21278720-21283712	0	-	21278720	21278720	8553170	2	240,205,	0,4787,
#Partially deleted in new
chr16	21299902	21300506	chr16:21299902-21300506	7	+	21299902	21299902	16724991	2	75,142,	0,462,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	21300848	21317948	chr16:21300848-21317948	5	+	21300848	21300848	16724991	3	487,87,1087,	0,15035,16013,
#Partially deleted in new
chr16	21300880	21316886	chr16:21300880-21316886	4	+	21300880	21300880	16724991	3	447,87,25,	0,15003,15981,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	21303246	21318591	chr16:21303246-21318591	4	+	21303246	21303246	16724991	3	211,87,1730,	0,12637,13615,
#Partially deleted in new
chr16	21315910	21339037	chr16:21315910-21339037	7	+	21315910	21315910	16724991	4	60,265,117,114,	0,951,22545,23013,
#Partially deleted in new
chr16	21347138	21352138	chr16:21347138-21352138	7	+	21347138	21347138	16724991	3	153,63,39,	0,2229,4961,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	21376647	21386064	chr16:21376647-21386064	7	+	21376647	21376647	16724991	4	182,71,246,508,	0,3497,5482,8909,
#Partially deleted in new
chr16	21401088	21401198	chr16:21401088-21401198	7	+	21401088	21401088	16724991	1	110,	0,
#Deleted in new
chr16	21402236	21405319	chr16:21402236-21405319	1	-	21402283	21405287	789624	2	745,597,	0,2486,
#Partially deleted in new
chr16	21404861	21425278	chr16:21404861-21425278	0	-	21404861	21425098	789624	7	432,36,61,196,100,129,300,	0,1792,1937,6072,6380,10095,20117,
#Partially deleted in new
chr16	21405172	21425322	chr16:21405172-21425322	0	-	21405172	21425003	789624	9	121,36,61,196,100,129,86,158,23,	0,1481,1626,5761,6069,9784,14317,19806,20127,
#Partially deleted in new
chr16	21406037	21418937	chr16:21406037-21418937	3	-	21406446	21418883	789624	6	652,61,145,100,129,129,	0,761,4896,5204,8919,12771,
#Partially deleted in new
chr16	21406829	21415277	chr16:21406829-21415277	0	-	21406829	21406829	8553170	4	30,145,77,321,	0,4104,4435,8127,
#Partially deleted in new
chr16	21410969	21425402	chr16:21410969-21425402	0	-	21410969	21410969	8553170	6	160,100,129,277,158,24,	0,272,3987,8520,14009,14409,
#Duplicated in new
chr16	21411242	21440719	chr16:21411242-21440719	0	-	21411242	21419697	789624	6	99,129,132,158,89,72,	0,3714,8392,13736,14047,29405,
#Partially deleted in new
chr16	21411276	21431553	chr16:21411276-21431553	0	-	21411276	21425098	789624	5	65,129,158,89,49,	0,3680,13702,14013,20228,
#Partially deleted in new
chr16	21415004	21425354	chr16:21415004-21425354	0	-	21415004	21415004	8553170	3	81,86,376,	0,4485,9974,
#Partially deleted in new
chr16	21415005	21448071	chr16:21415005-21448071	0	-	21415005	21415005	8553170	5	80,158,79,120,144,	0,9973,10294,32072,32922,
#Partially deleted in new
chr16	21419668	21425336	chr16:21419668-21425336	0	-	21419668	21419668	8553170	4	98,338,158,37,	0,2137,5310,5631,
#Partially deleted in new
chr16	21422706	21425381	chr16:21422706-21425381	0	-	21422706	21422706	8553170	2	80,403,	0,2272,
#Partially deleted in new
chr16	21424762	21448039	chr16:21424762-21448039	0	-	21424762	21424762	8553170	4	374,79,120,112,	0,537,22315,23165,
#Partially deleted in new
chr16	21425054	21448567	chr16:21425054-21448567	0	-	21425054	21425054	8553170	5	82,98,80,160,106,	0,324,22063,22873,23407,
#Partially deleted in new
chr16	21446682	21467160	chr16:21446682-21467160	5	-	21446682	21446682	16724991	19	515,160,148,110,202,143,155,165,197,200,141,102,88,119,156,131,291,102,69,	0,1245,1779,2906,5899,6249,7404,8660,8993,9577,10328,11088,11279,11838,13097,13407,17020,18033,20409,
#Partially deleted in new
chr16	21447077	21501886	chr16:21447077-21501886	5	-	21447077	21447077	16724991	29	120,160,148,110,202,143,155,165,197,200,141,102,88,119,156,131,291,102,225,173,98,73,126,214,56,137,156,164,110,	0,850,1384,2511,5504,5854,7009,8265,8598,9182,9933,10693,10884,11443,12702,13012,16625,17638,20014,22669,24576,25595,26046,29521,31013,32364,36554,37294,54699,
#Partially deleted in new
chr16	21447512	21456939	chr16:21447512-21456939	4	-	21447512	21447512	16724991	8	575,148,110,202,143,155,530,680,	0,949,2076,5069,5419,6574,7830,8747,
#Partially deleted in new
chr16	21463204	21520444	chr16:21463204-21520444	7	-	21463204	21463204	16724991	12	789,102,225,173,98,73,126,214,56,137,164,617,	0,1511,3887,6542,8449,9468,9919,13394,14886,16237,21167,56623,
#Partially deleted in new
chr16	21479544	21520179	chr16:21479544-21520179	4	-	21479544	21479544	16724991	4	34,164,39,352,	0,4827,8033,40283,
#Partially deleted in new
chr16	21502088	21520010	chr16:21502088-21520010	4	-	21502088	21502088	16724991	2	233,183,	0,17739,
#Deleted in new
chr16	21519829	21520365	chr16:21519829-21520365	7	-	21519829	21519829	16724991	1	536,	0,
#Partially deleted in new
chr16	21526823	21531141	chr16:21526823-21531141	3	-	21526823	21526823	8553170	2	391,40,	0,4278,
#Partially deleted in new
chr16	21532944	21550373	chr16:21532944-21550373	7	-	21532944	21532944	16724991	5	144,156,63,94,119,	0,3753,14456,14968,17310,
#Deleted in new
chr16	21538486	21538794	chr16:21538486-21538794	7	+	21538486	21538486	16724991	1	308,	0,
#Deleted in new
chr16	21587626	21587864	chr16:21587626-21587864	3	+	21587626	21587626	8553170	1	238,	0,
#Deleted in new
chr16	21597217	21598007	chr16:21597217-21598007	0	+	21597217	21597217	8553170	2	83,21,	0,769,
#Partially deleted in new
chr16	21597221	21655324	chr16:21597221-21655324	0	+	21597255	21655324	789624	5	79,191,210,185,98,	0,15423,20643,27709,58005,
#Partially deleted in new
chr16	21599475	21657473	chr16:21599475-21657473	3	+	21599733	21655432	789624	5	423,191,210,185,2247,	0,13169,18389,25455,55751,
#Partially deleted in new
chr16	21599557	21656119	chr16:21599557-21656119	1	+	21599733	21655432	789624	5	341,191,210,185,890,	0,13087,18307,25373,55672,
#Partially deleted in new
chr16	21599591	21625114	chr16:21599591-21625114	0	+	21599733	21617924	789624	3	307,210,184,	0,18273,25339,
#Partially deleted in new
chr16	21599717	21618009	chr16:21599717-21618009	0	+	21599733	21612735	789624	3	111,191,145,	0,12927,18147,
#Partially deleted in new
chr16	21599793	21657473	chr16:21599793-21657473	1	+	21599793	21655432	789624	6	41,16,191,210,185,2247,	0,89,12851,18071,25137,55433,
#Partially deleted in new
chr16	21612099	21625115	chr16:21612099-21625115	0	+	21612812	21625115	789624	4	199,191,210,185,	0,545,5765,12831,
#Partially deleted in new
chr16	21612699	21655281	chr16:21612699-21655281	0	+	21612699	21655281	789624	3	136,185,55,	0,12231,42527,
#Partially deleted in new
chr16	21617897	21625233	chr16:21617897-21625233	0	+	21617897	21625138	789624	2	177,303,	0,7033,
#Deleted in new
chr16	21626741	21627569	chr16:21626741-21627569	3	+	21626741	21626741	8553170	1	828,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	21639536	21652660	chr16:21639536-21652660	3	-	21641533	21652598	789624	6	2057,81,51,107,360,129,	0,3537,4011,4753,7596,12995,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	21642053	21642160	chr16:21642053-21642160	3	+	21642053	21642053	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	21642293	21642400	chr16:21642293-21642400	3	+	21642293	21642293	8553170	1	107,	0,
#Partially deleted in new
chr16	21644289	21652606	chr16:21644289-21652606	0	-	21644289	21652598	789624	3	107,186,75,	0,3017,8242,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	21646385	21652608	chr16:21646385-21652608	0	-	21646385	21646385	8553170	2	1107,77,	0,6146,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	21651868	21657471	chr16:21651868-21657471	0	+	21651868	21651868	8553170	1	5603,	0,
#Partially deleted in new
chr16	21663970	21760729	chr16:21663970-21760729	3	+	21678514	21760540	789624	29	262,95,29,31,28,88,132,236,104,101,140,124,216,168,141,59,118,74,136,191,94,130,188,156,143,137,98,196,260,	0,14540,14944,15065,15213,17767,21259,23442,27613,33804,36917,41198,45917,51014,52936,55162,55416,58934,62552,64270,66866,72290,76750,80910,87964,88398,89056,93111,96499,
#Partially deleted in new
chr16	21664207	21761935	chr16:21664207-21761935	0	+	21678514	21709969	789624	29	25,95,29,31,28,88,132,236,104,101,140,216,168,141,59,118,74,136,191,94,130,188,156,143,137,98,196,67,64,	0,14303,14707,14828,14976,17530,21022,23205,27376,33567,36680,45680,50777,52699,54925,55179,58697,62315,64033,66629,72053,76513,80673,87727,88161,88819,92874,96262,97664,
#Partially deleted in new
chr16	21678513	21760548	chr16:21678513-21760548	1	+	21678514	21760540	789624	28	92,29,31,28,88,132,236,104,101,182,124,216,168,141,59,118,74,136,191,94,130,188,156,143,137,98,196,79,	0,401,522,670,3224,6716,8899,13070,19261,22374,26655,31374,36471,38393,40619,40873,44391,48009,49727,52323,57747,62207,66367,73421,73855,74513,78568,81956,
#Partially deleted in new
chr16	21678513	21760728	chr16:21678513-21760728	1	+	21678514	21760540	789624	28	92,29,31,28,88,132,236,104,101,140,124,216,168,141,59,118,74,136,191,94,130,188,156,143,137,98,196,259,	0,401,522,670,3224,6716,8899,13070,19261,22374,26655,31374,36471,38393,40619,40873,44391,48009,49727,52323,57747,62207,66367,73421,73855,74513,78568,81956,
#Partially deleted in new
chr16	21684428	21760729	chr16:21684428-21760729	1	+	21684522	21760540	789624	24	124,132,236,104,101,140,124,216,168,141,59,118,74,136,191,94,130,188,156,143,137,98,196,260,	0,801,2984,7155,13346,16459,20740,25459,30556,32478,34704,34958,38476,42094,43812,46408,51832,56292,60452,67506,67940,68598,72653,76041,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	21704966	21709948	chr16:21704966-21709948	0	+	21704966	21704966	8553170	2	478,61,	0,4921,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr16	21704968	21760726	chr16:21704968-21760726	0	+	21704968	21704968	8553170	20	324,216,168,141,372,74,136,48,191,94,130,188,156,1476,90,143,137,98,196,257,	0,4919,10016,11938,14164,17936,21554,22143,23272,25868,31292,35752,39912,42329,43902,46966,47400,48058,52113,55501,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	21729570	21760723	chr16:21729570-21760723	0	+	21729570	21729570	8553170	9	1360,130,188,156,143,137,98,196,254,	0,6690,11150,15310,22364,22798,23456,27511,30899,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	21794094	21795759	chr16:21794094-21795759	3	-	21794094	21794094	8553170	1	1665,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	21796105	21808816	chr16:21796105-21808816	5	-	21796105	21796105	16724991	7	345,96,109,185,131,93,2686,	0,911,1644,3544,4601,6530,10025,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	21796629	21807737	chr16:21796629-21807737	4	-	21796629	21796629	16724991	6	483,109,185,131,93,1607,	0,1120,3020,4077,6006,9501,
#Partially deleted in new
chr16	21799667	21820384	chr16:21799667-21820384	7	-	21799667	21799667	16724991	12	167,131,93,99,70,64,60,130,90,57,106,90,	0,1039,2968,6463,9978,11107,12110,12618,12854,17794,18988,20627,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	21810426	21820410	chr16:21810426-21820410	5	-	21810426	21810426	16724991	8	412,60,130,90,57,106,180,116,	0,1351,1859,2095,7035,8229,8875,9868,
#Partially deleted in new
chr16	21833515	21833621	chr16:21833515-21833621	7	+	21833515	21833515	16724991	1	106,	0,
#Partially deleted in new
chr16	21834568	21857418	chr16:21834568-21857418	3	-	21834717	21857378	789624	9	949,235,1740,36,61,196,100,129,160,	0,1062,1436,4536,4681,8817,9125,12844,22690,
#Deleted in new
chr16	21834670	21837770	chr16:21834670-21837770	1	-	21834717	21837738	789624	2	493,849,	0,2251,
#Partially deleted in new
chr16	21837473	21843412	chr16:21837473-21843412	0	-	21837473	21837473	8553170	5	271,36,61,69,27,	0,1631,1776,2466,5912,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	21837563	21839878	chr16:21837563-21839878	0	-	21837563	21837563	8553170	3	181,36,629,	0,1541,1686,
#Partially deleted in new
chr16	21837623	21857602	chr16:21837623-21857602	0	-	21851852	21857378	789624	9	121,36,61,196,100,129,86,158,23,	0,1481,1626,5762,6070,9789,14146,19635,19956,
#Partially deleted in new
chr16	21837692	21843480	chr16:21837692-21843480	0	-	21837692	21837692	8553170	3	52,206,95,	0,1412,5693,
#Partially deleted in new
chr16	21837723	21843490	chr16:21837723-21843490	0	-	21837723	21837723	8553170	5	21,36,61,209,105,	0,1381,1526,3079,5662,
#Partially deleted in new
chr16	21838488	21851207	chr16:21838488-21851207	1	-	21838897	21851153	789624	6	652,61,145,100,129,129,	0,761,4897,5205,8924,12590,
#Partially deleted in new
chr16	21843385	21863833	chr16:21843385-21863833	0	-	21843385	21843385	8553170	6	196,100,129,132,87,51,	0,308,4027,8529,13873,20397,
#Partially deleted in new
chr16	21843442	21857657	chr16:21843442-21857657	0	-	21843442	21857378	789624	4	139,100,129,399,	0,251,3970,13816,
#Partially deleted in new
chr16	21843485	21857662	chr16:21843485-21857662	0	-	21843485	21857378	789624	5	96,100,129,158,93,	0,208,3927,13773,14084,
#Partially deleted in new
chr16	21843715	21852220	chr16:21843715-21852220	0	-	21843715	21851977	789624	3	78,129,306,	0,3697,8199,
#Partially deleted in new
chr16	21843743	21857660	chr16:21843743-21857660	0	-	21852016	21857378	789624	5	50,129,132,158,91,	0,3669,8171,13515,13826,
#Partially deleted in new
chr16	21847411	21851519	chr16:21847411-21851519	0	-	21847411	21847411	8553170	3	130,97,160,	0,3667,3948,
#Partially deleted in new
chr16	21847413	21851255	chr16:21847413-21851255	0	-	21847413	21847413	8553170	2	128,177,	0,3665,
#Partially deleted in new
chr16	21847452	21863837	chr16:21847452-21863837	0	-	21852016	21857378	789624	5	89,132,158,79,55,	0,4462,9806,10127,16330,
#Partially deleted in new
chr16	21847481	21857682	chr16:21847481-21857682	0	-	21852016	21857378	789624	4	60,277,158,24,	0,4288,9777,10177,
#Partially deleted in new
chr16	21851948	21857616	chr16:21851948-21857616	0	-	21851948	21851948	8553170	4	98,338,158,37,	0,2135,5310,5631,
#Partially deleted in new
chr16	21857042	21880299	chr16:21857042-21880299	0	-	21857042	21857042	8553170	4	374,79,120,112,	0,537,22295,23145,
#Partially deleted in new
chr16	21857291	21864103	chr16:21857291-21864103	0	-	21857291	21857378	789624	3	125,98,321,	0,367,6491,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	21857296	21866308	chr16:21857296-21866308	0	-	21857296	21857378	789624	3	120,98,182,	0,362,8830,
#Partially deleted in new
chr16	21857334	21880827	chr16:21857334-21880827	0	-	21857334	21857334	8553170	5	82,98,80,160,106,	0,324,22043,22853,23387,
#Partially deleted in new
chr16	21879337	21916024	chr16:21879337-21916024	5	-	21879337	21879337	16724991	28	120,160,148,110,202,143,155,165,197,200,141,102,88,119,156,131,270,102,225,173,98,73,126,214,56,137,156,164,	0,850,1384,2504,5486,5836,6992,8246,8579,9163,9914,10674,10865,11426,12254,12564,16185,17177,19549,22204,24111,25130,25581,29054,30546,31897,35783,36523,
#Partially deleted in new
chr16	21879772	21889180	chr16:21879772-21889180	6	-	21879772	21879772	16724991	8	575,148,110,202,143,155,530,680,	0,949,2069,5051,5401,6557,7811,8728,
#Partially deleted in new
chr16	21880754	21882227	chr16:21880754-21882227	4	-	21880754	21880754	16724991	2	115,386,	0,1087,
#Partially deleted in new
chr16	21884953	21889287	chr16:21884953-21889287	4	-	21884953	21884953	16724991	7	72,143,155,165,197,200,36,	0,220,1376,2630,2963,3547,4298,
#Partially deleted in new
chr16	21901551	21911372	chr16:21901551-21911372	4	-	21901551	21901551	16724991	7	163,98,73,126,214,56,138,	0,1897,2916,3367,6840,8332,9683,
#Partially deleted in new
chr16	21904118	21919156	chr16:21904118-21919156	5	-	21904118	21904118	16724991	6	926,214,56,137,164,92,	0,4273,5765,7116,11742,14946,
#Partially deleted in new
chr16	21938864	21944958	chr16:21938864-21944958	7	+	21938864	21938864	16724991	4	188,171,182,96,	0,817,1412,5998,
#Partially deleted in new
chr16	21939755	21944987	chr16:21939755-21944987	5	+	21939755	21939755	16724991	3	97,182,125,	0,521,5107,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	21950217	21951708	chr16:21950217-21951708	3	-	21950217	21950217	8553170	1	1491,	0,
#Partially deleted in new
chr16	21952659	21983660	chr16:21952659-21983660	3	+	21953423	21983171	0	14	797,84,150,65,57,125,98,58,96,200,81,77,154,573,	0,4575,4757,5875,9800,10101,12748,15968,18865,19263,21236,23507,27887,30428,
#Partially deleted in new
chr16	21953370	21983325	chr16:21953370-21983325	1	+	21953423	21983202	789624	13	86,84,150,65,57,125,98,58,96,200,81,77,238,	0,3864,4046,5164,9089,9390,12037,15257,18154,18552,20525,22796,29717,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	21953370	21963212	chr16:21953370-21963212	0	+	21953370	21953370	8553170	2	86,452,	0,9390,
#Partially deleted in new
chr16	21953386	21983336	chr16:21953386-21983336	0	+	21953423	21980591	789624	12	70,84,150,65,57,125,98,58,96,200,154,249,	0,3848,4030,5148,9073,9374,12021,15241,18138,18536,27160,29701,
#Partially deleted in new
chr16	21953386	21965505	chr16:21953386-21965505	0	+	21953423	21965505	789624	6	70,150,65,57,125,98,	0,4030,5148,9073,9374,12021,
#Partially deleted in new
chr16	21953402	21962510	chr16:21953402-21962510	0	+	21953423	21961346	789624	6	54,84,150,65,138,51,	0,3832,4014,5132,7925,9057,
#Partially deleted in new
chr16	21961461	21965533	chr16:21961461-21965533	0	+	21961461	21961461	8553170	4	4,57,125,126,	0,998,1299,3946,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	21962191	21976947	chr16:21962191-21976947	0	+	21962191	21962191	8553170	7	694,98,58,96,200,81,781,	0,3216,6436,9333,9731,11704,13975,
#Partially deleted in new
chr16	21968461	21973957	chr16:21968461-21973957	0	+	21968461	21968461	8553170	4	224,96,200,62,	0,3063,3461,5434,
#Partially deleted in new
chr16	21980261	21983347	chr16:21980261-21983347	0	+	21980261	21980261	8553170	2	439,260,	0,2826,
#Partially deleted in new
chr16	21983864	22001110	chr16:21983864-22001110	3	-	21984266	22001047	789624	4	796,190,180,94,	0,4737,12457,17152,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	21983864	22001110	chr16:21983864-22001110	0	-	21988779	22001047	789624	5	796,190,71,180,94,	0,4737,11373,12457,17152,
#Partially deleted in new
chr16	21983864	22001098	chr16:21983864-22001098	1	-	21984266	22001047	789624	3	796,190,82,	0,4737,17152,
#Partially deleted in new
chr16	21998309	21999656	chr16:21998309-21999656	7	+	21998309	21998309	16724991	2	105,829,	0,518,
#Deleted in new
chr16	22007479	22008062	chr16:22007479-22008062	3	-	22007479	22007479	8553170	1	583,	0,
#Partially deleted in new
chr16	22007637	22076378	chr16:22007637-22076378	1	+	22007644	22075707	789624	2	59,892,	0,67849,
#Partially deleted in new
chr16	22008208	22087534	chr16:22008208-22087534	0	+	22008301	22064348	789624	7	199,101,213,193,68,107,478,	0,56129,67278,75467,76999,77435,78848,
#Partially deleted in new
chr16	22008208	22084643	chr16:22008208-22084643	3	+	22008301	22080880	789624	3	199,213,3948,	0,67278,72487,
#Partially deleted in new
chr16	22008208	22087533	chr16:22008208-22087533	1	+	22008301	22083701	789624	6	199,213,193,68,107,477,	0,67278,75467,76999,77435,78848,
#Partially deleted in new
chr16	22008282	22076056	chr16:22008282-22076056	1	+	22008301	22075707	789624	2	125,570,	0,67204,
#Partially deleted in new
chr16	22008310	22080797	chr16:22008310-22080797	0	+	22008310	22075316	789624	3	97,406,102,	0,66983,72385,
#Partially deleted in new
chr16	22083255	22090164	chr16:22083255-22090164	0	-	22083255	22083255	8553170	2	243,142,	0,6767,
#Partially deleted in new
chr16	22085130	22087534	chr16:22085130-22087534	0	+	22085130	22085130	8553170	3	145,107,478,	0,513,1926,
#Deleted in new
chr16	22085798	22087106	chr16:22085798-22087106	1	-	22085798	22085798	8553170	2	396,9,	0,1299,
#Partially deleted in new
chr16	22086986	22092231	chr16:22086986-22092231	3	-	22086986	22086986	8553170	3	265,226,24,	0,3036,5221,
#Partially deleted in new
chr16	22092537	22110912	chr16:22092537-22110912	0	+	22092537	22092537	8553170	5	114,87,300,55,25,	0,4321,7656,10937,18350,
#Partially deleted in new
chr16	22092539	22110979	chr16:22092539-22110979	0	+	22109577	22110979	789624	6	112,87,125,78,99,92,	0,4319,7654,7876,16942,18348,
#Partially deleted in new
chr16	22092540	22138425	chr16:22092540-22138425	0	+	22092540	22092540	8553170	20	111,87,124,300,55,99,107,126,109,66,126,104,81,95,120,75,145,312,71,66,	0,4318,5031,7653,10934,16941,18347,22806,24218,24570,26361,28973,30544,31072,33637,38664,39044,40243,41827,45819,
#Partially deleted in new
chr16	22092541	22156966	chr16:22092541-22156966	3	+	22092637	22155902	789624	34	110,87,124,125,78,55,99,107,126,109,66,126,136,104,81,95,120,75,145,196,71,153,91,111,98,138,109,145,145,152,124,98,66,935,	0,4317,5030,7652,7874,10933,16940,18346,22805,24217,24569,26360,28426,28972,30543,31071,33636,38663,39043,40358,41826,45818,47612,49040,50126,51705,53694,55620,57245,58153,59969,63025,63309,63490,
#Partially deleted in new
chr16	22092541	22138397	chr16:22092541-22138397	0	+	22092637	22138397	789624	23	110,87,124,125,78,55,99,107,126,109,66,126,136,104,81,63,95,120,75,145,196,71,38,	0,4317,5030,7652,7874,10933,16940,18346,22805,24217,24569,26360,28426,28972,30543,30932,31071,33636,38663,39043,40358,41826,45818,
#Partially deleted in new
chr16	22121023	22156100	chr16:22121023-22156100	0	+	22121023	22141611	789624	23	80,104,81,95,120,75,145,196,71,153,91,47,111,98,138,109,145,145,152,124,98,66,69,	0,490,2061,2589,5154,10181,10561,11876,13344,17336,19130,20179,20558,21644,23223,25212,27138,28763,29671,31487,34543,34827,35008,
#Partially deleted in new
chr16	22131711	22138552	chr16:22131711-22138552	0	+	22131711	22138518	789624	4	18,196,71,193,	0,1188,2656,6648,
#Partially deleted in new
chr16	22146271	22155902	chr16:22146271-22155902	1	+	22146271	22155902	789624	8	73,72,145,145,152,124,98,52,	0,1299,1890,3515,4423,6239,9295,9579,
#Partially deleted in new
chr16	22165582	22191754	chr16:22165582-22191754	3	+	22165582	22190393	789624	12	55,185,96,58,119,76,83,138,66,64,74,1616,	0,667,1321,3862,5250,6673,12547,15936,16629,18598,21138,24556,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr16	22206281	22288732	chr16:22206281-22288732	3	+	22225729	22283996	0	18	398,322,101,61,38,172,150,133,128,202,68,78,63,135,189,125,179,4846,	0,19372,38348,42473,44372,44869,50466,50971,51361,52212,54180,56828,58536,60108,60406,67344,73916,77605,
#Partially deleted in new
chr16	22206325	22265245	chr16:22206325-22265245	0	+	22225729	22258703	789624	13	354,322,101,61,38,172,150,133,128,334,68,78,428,	0,19328,38304,42429,44328,44825,50422,50927,51317,52168,54136,56784,58492,
#Partially deleted in new
chr16	22257643	22263322	chr16:22257643-22263322	0	+	22257643	22257643	8553170	4	127,202,68,213,	0,850,2818,5466,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	22286557	22287233	chr16:22286557-22287233	0	+	22286557	22286557	8553170	2	480,32,	0,644,
#Partially deleted in new
chr16	22286707	22288738	chr16:22286707-22288738	3	-	22286707	22286707	8553170	2	366,303,	0,1728,
#Partially deleted in new
chr16	22286912	22288736	chr16:22286912-22288736	0	-	22286912	22286912	8553170	2	161,306,	0,1518,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	22286941	22288732	chr16:22286941-22288732	0	-	22286941	22286941	8553170	2	132,342,	0,1449,
#Partially deleted in new
chr16	22297374	22335101	chr16:22297374-22335101	1	+	22308168	22333700	789624	20	163,51,78,116,83,108,50,120,86,45,92,121,82,60,158,62,518,78,126,1458,	0,7781,10773,11550,12053,16245,16704,17714,19226,19620,19740,21451,25475,26979,27128,27830,28386,31135,34685,36269,
#Partially deleted in new
chr16	22297408	22335103	chr16:22297408-22335103	3	+	22302968	22333700	789624	21	129,74,51,78,116,83,108,50,120,86,45,92,121,82,60,158,62,518,78,126,1460,	0,5522,7747,10739,11516,12019,16211,16670,17680,19192,19586,19706,21417,25441,26945,27094,27796,28352,31101,34651,36235,
#Partially deleted in new
chr16	22297410	22333935	chr16:22297410-22333935	1	+	22302968	22333700	789624	21	127,74,51,78,116,83,108,50,120,86,45,92,121,82,60,158,62,518,78,63,292,	0,5520,7745,10737,11514,12017,16209,16668,17678,19190,19584,19704,21415,25439,26943,27092,27794,28350,31099,34712,36233,
#Partially deleted in new
chr16	22297419	22313654	chr16:22297419-22313654	0	+	22298982	22313654	789624	7	118,84,51,78,116,83,35,	0,1533,7736,10728,11505,12008,16200,
#Partially deleted in new
chr16	22297426	22334061	chr16:22297426-22334061	1	+	22302968	22333700	789624	20	111,74,21,116,83,108,50,120,86,45,92,121,82,60,158,62,518,78,126,418,	0,5504,10778,11498,12001,16193,16652,17662,19174,19568,19688,21399,25423,26927,27076,27778,28334,31083,34633,36217,
#Partially deleted in new
chr16	22297429	22309476	chr16:22297429-22309476	0	+	22302968	22309476	789624	7	108,84,74,51,78,116,49,	0,1523,5501,7726,10718,11495,11998,
#Partially deleted in new
chr16	22297432	22334025	chr16:22297432-22334025	1	+	22302968	22333700	789624	20	105,74,51,78,116,83,108,50,120,86,45,92,121,82,60,158,62,518,78,382,	0,5498,7723,10715,11492,11995,16187,16646,17656,19168,19562,19682,21393,25417,26921,27070,27772,28328,31077,36211,
#Partially deleted in new
chr16	22297433	22309463	chr16:22297433-22309463	0	+	22302968	22305480	789624	7	104,74,51,116,78,116,36,	0,5497,7722,7945,10714,11491,11994,
#Partially deleted in new
chr16	22297433	22313660	chr16:22297433-22313660	0	+	22308168	22313660	789624	6	104,51,78,116,83,41,	0,7722,10714,11491,11994,16186,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr16	22297454	22329091	chr16:22297454-22329091	0	+	22297454	22297454	8553170	18	83,74,51,78,116,83,108,50,120,86,45,92,121,82,60,158,62,3331,	0,5476,7701,10693,11470,11973,16165,16624,17634,19146,19540,19660,21371,25395,26899,27048,27750,28306,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	22302469	22310321	chr16:22302469-22310321	0	+	22302469	22302469	8553170	4	535,51,78,1397,	0,2686,5678,6455,
#Partially deleted in new
chr16	22302805	22308481	chr16:22302805-22308481	0	+	22302805	22302805	8553170	3	199,51,334,	0,2350,5342,
#Partially deleted in new
chr16	22302953	22333935	chr16:22302953-22333935	0	+	22302968	22309475	789624	20	51,51,78,66,83,108,50,120,86,45,92,121,82,60,158,62,518,78,126,292,	0,2202,5194,6021,6474,10666,11125,12135,13647,14041,14161,15872,19896,21400,21549,22251,22807,25556,29106,30690,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	22302973	22309945	chr16:22302973-22309945	0	+	22302973	22302973	8553170	6	31,51,78,116,78,95,	0,2182,5174,5951,6454,6877,
#Partially deleted in new
chr16	22308961	22318845	chr16:22308961-22318845	0	+	22308961	22313686	789624	9	79,83,70,50,120,86,45,92,20,	0,466,4696,5117,6127,7639,8033,8153,9864,
#Partially deleted in new
chr16	22314913	22322872	chr16:22314913-22322872	0	+	22317004	22322872	789624	6	295,86,45,92,121,23,	0,1687,2081,2201,3912,7936,
#Partially deleted in new
chr16	22316980	22325359	chr16:22316980-22325359	0	+	22316980	22316980	8553170	7	59,92,121,82,60,158,155,	0,134,1845,5869,7373,7522,8224,
#Partially deleted in new
chr16	22328318	22333696	chr16:22328318-22333696	0	+	22328318	22328318	8553170	3	269,126,53,	0,3741,5325,
#Partially deleted in new
chr16	22331434	22334441	chr16:22331434-22334441	0	+	22331434	22331434	8553170	2	751,798,	0,2209,
#Partially deleted in new
chr16	22345935	22374617	chr16:22345935-22374617	3	-	22346964	22374309	789624	5	1888,165,149,113,387,	0,3343,3765,18966,28295,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	22347474	22431596	chr16:22347474-22431596	0	-	22347474	22364940	789624	7	349,165,149,113,54,153,73,	0,1804,2226,17427,74686,82321,84049,
#Partially deleted in new
chr16	22347633	22374437	chr16:22347633-22374437	0	-	22349787	22374309	789624	4	190,165,149,207,	0,1645,2067,26597,
#Partially deleted in new
chr16	22347754	22375090	chr16:22347754-22375090	0	-	22347754	22349816	789624	4	69,165,149,184,	0,1524,1946,27152,
#Deleted in new
chr16	22349155	22349773	chr16:22349155-22349773	0	-	22349274	22349773	789624	2	288,73,	0,545,
#Partially deleted in new
chr16	22349371	22433665	chr16:22349371-22433665	0	-	22349371	22349816	789624	5	72,149,153,109,73,	0,329,80424,83354,84221,
#Partially deleted in new
chr16	22364927	22437165	chr16:22364927-22437165	0	-	22364927	22364927	8553170	6	87,153,109,185,131,161,	0,64868,67798,69699,70754,72077,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	22365120	22369047	chr16:22365120-22369047	3	+	22365120	22365120	8553170	3	69,121,233,	0,1925,3694,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	22374858	22376273	chr16:22374858-22376273	1	+	22374858	22374858	8553170	1	1415,	0,
#Partially deleted in new
chr16	22382435	22407428	chr16:22382435-22407428	7	+	22382435	22382435	16724991	5	165,762,159,84,120,	0,2869,16864,20257,24873,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	22418671	22437715	chr16:22418671-22437715	7	-	22418671	22418671	16724991	7	1923,154,153,109,185,131,711,	0,7541,11124,14054,15955,17010,18333,
#Partially deleted in new
chr16	22429795	22435812	chr16:22429795-22435812	5	-	22429795	22429795	16724991	4	153,109,185,131,	0,2930,4831,5886,
#Partially deleted in new
chr16	22437007	22460813	chr16:22437007-22460813	5	+	22437007	22437007	16724991	5	485,39,164,137,27,	0,14612,17694,22347,23779,
#Partially deleted in new
chr16	22437400	22491826	chr16:22437400-22491826	7	+	22437400	22437400	16724991	29	92,164,156,137,56,214,126,73,98,173,225,102,270,131,156,119,88,102,141,200,197,165,155,143,202,110,148,160,120,	0,17301,18049,21954,23386,24720,28292,28796,29790,31622,34227,36724,37548,41290,41575,42863,43453,43630,44351,45043,45630,45995,47261,48429,48720,51805,52894,53416,54306,
#Partially deleted in new
chr16	22437584	22467286	chr16:22437584-22467286	4	+	22437584	22437584	16724991	9	153,39,164,137,56,214,126,73,96,	0,14035,17117,21770,23202,24536,28108,28612,29606,
#Partially deleted in new
chr16	22451566	22466618	chr16:22451566-22466618	4	+	22451566	22451566	16724991	6	92,164,137,56,214,926,	0,3135,7788,9220,10554,14126,
#Partially deleted in new
chr16	22471636	22478822	chr16:22471636-22478822	4	+	22471636	22471636	16724991	4	216,102,270,132,	0,2488,3312,7054,
#Partially deleted in new
chr16	22475036	22492220	chr16:22475036-22492220	5	+	22475036	22475036	16724991	17	182,131,156,119,88,102,141,200,197,165,155,143,202,110,148,160,514,	0,3654,3939,5227,5817,5994,6715,7407,7994,8359,9625,10793,11084,14169,15258,15780,16670,
#Partially deleted in new
chr16	22479120	22536513	chr16:22479120-22536513	0	+	22479120	22479120	8553170	23	11,119,88,102,141,200,197,165,155,143,202,110,148,160,120,79,158,129,100,196,61,36,2888,	0,1143,1733,1910,2631,3323,3910,4275,5541,6709,7000,10085,11174,11696,12586,34401,34643,44699,48445,48657,52939,53109,54505,
#Partially deleted in new
chr16	22481963	22491391	chr16:22481963-22491391	4	+	22481963	22481963	16724991	8	680,530,155,143,202,110,148,575,	0,1067,2698,3866,4157,7242,8331,8853,
#Partially deleted in new
chr16	22490336	22534769	chr16:22490336-22534769	0	+	22513801	22534769	789624	11	106,160,80,98,158,129,100,196,61,36,1144,	0,480,1370,23087,23427,33483,37229,37441,41723,41893,43289,
#Partially deleted in new
chr16	22490864	22514137	chr16:22490864-22514137	0	+	22490864	22490864	8553170	4	112,120,79,374,	0,842,22657,22899,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	22504850	22527630	chr16:22504850-22527630	0	+	22513801	22527630	789624	6	207,63,89,158,129,65,	0,2486,8671,8913,18969,22715,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	22505844	22513834	chr16:22505844-22513834	0	+	22513801	22513834	789624	3	391,89,71,	0,7677,7919,
#Partially deleted in new
chr16	22507173	22523934	chr16:22507173-22523934	0	+	22513801	22523934	789624	4	226,98,158,115,	0,6250,6590,16646,
#Partially deleted in new
chr16	22507344	22523908	chr16:22507344-22523908	0	+	22513801	22519167	789624	5	55,79,158,132,89,	0,6177,6419,11793,16475,
#Partially deleted in new
chr16	22513057	22513842	chr16:22513057-22513842	0	+	22513801	22513842	789624	2	464,79,	0,706,
#Partially deleted in new
chr16	22513518	22516201	chr16:22513518-22516201	0	+	22513518	22513518	8553170	2	403,80,	0,2603,
#Partially deleted in new
chr16	22513521	22536521	chr16:22513521-22536521	0	+	22513801	22519167	789624	9	89,158,132,129,100,196,61,36,2896,	0,242,5616,10298,14044,14256,18538,18708,20104,
#Partially deleted in new
chr16	22513522	22536505	chr16:22513522-22536505	3	+	22513801	22536385	789624	7	399,129,100,196,61,36,2880,	0,10297,14043,14255,18537,18707,20103,
#Partially deleted in new
chr16	22513522	22536385	chr16:22513522-22536385	1	+	22513801	22536385	789624	9	399,129,100,196,61,36,1083,103,1553,	0,10297,14043,14255,18537,18707,20103,21188,21310,
#Partially deleted in new
chr16	22513522	22527787	chr16:22513522-22527787	0	+	22513801	22527787	789624	4	399,129,100,10,	0,10297,14043,14255,
#Partially deleted in new
chr16	22513545	22523900	chr16:22513545-22523900	0	+	22513801	22519331	789624	3	376,86,81,	0,5783,10274,
#Partially deleted in new
chr16	22513563	22519235	chr16:22513563-22519235	0	+	22513563	22513563	8553170	4	37,158,338,98,	0,200,3201,5574,
#Partially deleted in new
chr16	22513573	22536477	chr16:22513573-22536477	1	+	22513801	22536385	789624	8	37,158,129,100,196,61,36,2852,	0,190,10246,13992,14204,18486,18656,20052,
#Partially deleted in new
chr16	22513577	22533746	chr16:22513577-22533746	0	+	22513801	22519331	789624	9	23,158,86,129,100,196,61,36,121,	0,186,5751,10242,13988,14200,18482,18652,20048,
#Partially deleted in new
chr16	22513681	22534769	chr16:22513681-22534769	0	+	22513801	22534769	789624	7	240,129,100,196,61,36,1144,	0,10138,13884,14096,18378,18548,19944,
#Partially deleted in new
chr16	22513759	22527937	chr16:22513759-22527937	0	+	22513801	22519167	789624	5	162,277,129,100,160,	0,5378,10060,13806,14018,
#Partially deleted in new
chr16	22519966	22532881	chr16:22519966-22532881	1	+	22520020	22532472	789624	6	129,129,100,145,61,652,	0,3853,7599,7862,12093,12263,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	22523522	22527880	chr16:22523522-22527880	0	+	22523522	22523522	8553170	3	426,100,103,	0,4043,4255,
#Partially deleted in new
chr16	22523627	22532089	chr16:22523627-22532089	0	+	22523627	22523627	8553170	4	321,77,145,30,	0,3938,4201,8432,
#Partially deleted in new
chr16	22523842	22528107	chr16:22523842-22528107	0	+	22523842	22523842	8553170	3	106,100,330,	0,3723,3935,
#Partially deleted in new
chr16	22523882	22533725	chr16:22523882-22533725	0	+	22523882	22527783	789624	7	66,100,231,102,61,36,100,	0,3683,3860,7060,8177,8347,9743,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	22531491	22533812	chr16:22531491-22533812	0	+	22531491	22531491	8553170	3	629,36,187,	0,738,2134,
#Partially deleted in new
chr16	22533599	22536432	chr16:22533599-22536432	1	+	22533631	22536385	8553170	2	849,493,	0,2340,
#Partially deleted in new
chr16	22537477	22537584	chr16:22537477-22537584	7	-	22537477	22537477	16724991	1	107,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	22545697	22576865	chr16:22545697-22576865	7	+	22545697	22545697	16724991	9	1359,130,188,156,143,137,98,196,254,	0,6686,11145,15306,22365,22809,23467,27524,30914,
#Partially deleted in new
chr16	22546963	22576682	chr16:22546963-22576682	5	+	22546963	22546963	16724991	9	93,130,188,156,143,137,98,196,71,	0,5420,9879,14040,21099,21543,22201,26258,29648,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	22610530	22612196	chr16:22610530-22612196	3	-	22610530	22610530	8553170	1	1666,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	22612542	22613483	chr16:22612542-22613483	3	-	22612542	22612542	8553170	2	345,30,	0,911,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	22806288	22813201	chr16:22806288-22813201	3	-	22806288	22806288	8553170	3	4349,119,215,	0,5994,6698,
#Deleted in new
chr16	22811743	22813680	chr16:22811743-22813680	0	-	22811743	22811743	8553170	2	658,694,	0,1243,
#Partially deleted in new
chr16	22814176	22916338	chr16:22814176-22916338	3	+	22814610	22915562	789624	2	919,1395,	0,100767,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	23020336	23023611	chr16:23020336-23023611	3	+	23020336	23020336	8553170	2	283,649,	0,2626,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	23061405	23149270	chr16:23061405-23149270	3	-	23068045	23149270	789624	16	8211,153,159,226,120,130,78,95,112,181,145,136,93,89,138,633,	0,10639,12316,18540,21032,23454,24179,25686,26318,29218,40913,44035,44807,44993,46640,87232,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	23061405	23064173	chr16:23061405-23064173	3	-	23061405	23061405	8553170	1	2768,	0,
#Deleted in new
chr16	23061766	23062232	chr16:23061766-23062232	3	+	23061766	23061766	8553170	1	466,	0,
#Partially deleted in new
chr16	23067978	23072548	chr16:23067978-23072548	1	-	23068045	23072411	789624	2	1638,504,	0,4066,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	23078978	23087130	chr16:23078978-23087130	0	-	23079739	23087130	789624	5	1193,120,130,78,39,	0,3459,5881,6606,8113,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	23167576	23186395	chr16:23167576-23186395	3	-	23167576	23167576	8553170	4	1273,116,120,193,	0,2501,13875,18626,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	23182714	23216883	chr16:23182714-23216883	3	+	23186271	23215469	789624	13	99,361,301,191,104,164,99,118,79,58,62,76,1795,	0,3513,6656,9637,11456,14549,27035,29319,29963,30122,30387,31997,32374,
#Partially deleted in new
chr16	23194877	23213104	chr16:23194877-23213104	3	-	23194877	23194877	8553170	4	144,92,144,101,	0,1047,1526,18126,
#Partially deleted in new
chr16	23278230	23352913	chr16:23278230-23352913	0	+	23278230	23278230	8553170	4	110,68,319,113,	0,5506,70361,74570,
#Partially deleted in new
chr16	23302269	23381299	chr16:23302269-23381299	3	+	23348599	23380801	789624	13	168,319,274,191,104,164,108,118,76,58,62,76,879,	0,46322,50531,53029,65586,69029,69506,73468,74895,75059,76436,77824,78151,
#Partially deleted in new
chr16	23348591	23380803	chr16:23348591-23380803	0	+	23348599	23371413	789624	11	319,274,191,164,108,118,76,58,62,76,383,	0,4209,6707,22707,23184,27146,28573,28737,30114,31502,31829,
#Partially deleted in new
chr16	23348591	23380803	chr16:23348591-23380803	1	+	23348599	23380801	789624	11	319,274,191,104,164,118,76,58,62,76,383,	0,4209,6707,19264,22707,27146,28573,28737,30114,31502,31829,
#Partially deleted in new
chr16	23348591	23380803	chr16:23348591-23380803	1	+	23348599	23380801	789624	12	319,274,110,104,164,108,118,76,58,62,76,383,	0,4209,6788,19264,22707,23184,27146,28573,28737,30114,31502,31829,
#Partially deleted in new
chr16	23348794	23353244	chr16:23348794-23353244	0	+	23348794	23348794	8553170	2	116,444,	0,4006,
#Partially deleted in new
chr16	23355416	23372183	chr16:23355416-23372183	0	+	23355416	23372000	789624	4	73,104,164,408,	0,12439,15882,16359,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	23358201	23359379	chr16:23358201-23359379	0	+	23358201	23358201	8553170	2	344,175,	0,1003,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr16	23388492	23453180	chr16:23388492-23453180	3	-	23388919	23452994	789624	17	594,144,115,84,141,187,66,117,155,128,199,123,83,169,117,149,355,	0,3887,4740,9553,15201,17583,21802,24955,28474,30207,36256,45052,46143,53984,56555,57320,64333,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	23388640	23393581	chr16:23388640-23393581	0	-	23388640	23388640	8553170	3	446,144,349,	0,3739,4592,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	23388775	23393318	chr16:23388775-23393318	0	-	23392199	23393318	789624	4	311,273,144,86,	0,3186,3604,4457,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	23389869	23394946	chr16:23389869-23394946	0	-	23389869	23389869	8553170	2	415,59,	0,5018,
#Partially deleted in new
chr16	23391842	23393292	chr16:23391842-23393292	0	-	23392242	23393292	789624	2	681,60,	0,1390,
#Partially deleted in new
chr16	23398045	23417293	chr16:23398045-23417293	0	-	23398045	23398045	8553170	6	84,141,187,66,117,327,	0,5648,8030,12249,15402,18921,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	23412379	23416680	chr16:23412379-23416680	3	+	23412379	23412379	8553170	1	4301,	0,
#Deleted in new
chr16	23441840	23441921	chr16:23441840-23441921	3	+	23441840	23441840	8553170	1	81,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	23446445	23447282	chr16:23446445-23447282	3	-	23446445	23446445	8553170	1	837,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	23452757	23457588	chr16:23452757-23457588	3	+	23452757	23452757	8553170	3	508,61,161,	0,2712,4670,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	23453006	23457606	chr16:23453006-23457606	0	+	23453006	23453006	8553170	2	259,179,	0,4421,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	23453006	23455789	chr16:23453006-23455789	0	+	23453006	23453006	8553170	2	259,320,	0,2463,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr16	23463541	23510494	chr16:23463541-23510494	3	-	23467589	23510411	0	17	4159,111,170,158,134,29,123,126,82,138,81,104,124,99,76,85,174,	0,5344,6454,11362,14826,15341,16223,17103,19381,22473,23168,25064,28135,29818,30761,32152,46779,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	23464322	23510424	chr16:23464322-23510424	1	-	23465350	23510411	789624	8	1076,45,104,124,99,76,85,104,	0,22423,24283,27354,29037,29980,31371,45998,
#Deleted in new
chr16	23466589	23467535	chr16:23466589-23467535	0	-	23466589	23466589	8553170	2	189,104,	0,842,
#Partially deleted in new
chr16	23466590	23469582	chr16:23466590-23469582	0	-	23466590	23466590	8553170	2	1110,697,	0,2295,
#Deleted in new
chr16	23466684	23467413	chr16:23466684-23467413	0	-	23466684	23466684	8553170	2	146,425,	0,304,
#Partially deleted in new
chr16	23474952	23480423	chr16:23474952-23480423	0	-	23474952	23474952	8553170	5	109,134,29,123,192,	0,3415,3930,4812,5279,
#Partially deleted in new
chr16	23486084	23494402	chr16:23486084-23494402	0	-	23486084	23486084	8553170	6	68,81,104,124,99,100,	0,625,2521,5592,7275,8218,
#Partially deleted in new
chr16	23488679	23510464	chr16:23488679-23510464	0	-	23495689	23510411	789624	6	30,124,99,76,90,144,	0,2997,4680,5623,7009,21641,
#Partially deleted in new
chr16	23491675	23510494	chr16:23491675-23510494	0	-	23491675	23491675	8553170	4	125,1019,85,174,	0,1684,4018,18645,
#Partially deleted in new
chr16	23491684	23510492	chr16:23491684-23510492	0	-	23495689	23510411	789624	5	116,99,76,90,172,	0,1675,2618,4004,18636,
#Partially deleted in new
chr16	23491744	23521995	chr16:23491744-23521995	0	-	23491744	23521800	789624	6	56,99,76,85,53,203,	0,1615,2558,3949,27842,30048,
#Partially deleted in new
chr16	23491776	23510488	chr16:23491776-23510488	0	-	23495689	23510411	789624	5	24,228,76,90,168,	0,1583,2526,3912,18544,
#Partially deleted in new
chr16	23493359	23510424	chr16:23493359-23510424	0	-	23495717	23510411	789624	4	99,80,79,108,	0,939,2334,16957,
#Partially deleted in new
chr16	23493422	23510448	chr16:23493422-23510448	0	-	23493422	23510411	789624	4	99,76,85,128,	0,880,2271,16898,
#Partially deleted in new
chr16	23493430	23510389	chr16:23493430-23510389	0	-	23493430	23510389	789624	4	157,76,85,69,	0,872,2263,16890,
#Partially deleted in new
chr16	23494111	23495778	chr16:23494111-23495778	0	-	23494111	23494111	8553170	2	267,65,	0,1602,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	23495342	23510487	chr16:23495342-23510487	0	-	23495342	23495342	8553170	2	436,167,	0,14978,
#Deleted in new
chr16	23500904	23501630	chr16:23500904-23501630	7	+	23500904	23500904	16724991	1	726,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	23522013	23557375	chr16:23522013-23557375	3	-	23524370	23557343	789624	9	2441,136,131,154,109,473,190,156,171,	0,3230,7488,7730,10643,12874,22500,30135,35191,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	23522016	23557350	chr16:23522016-23557350	1	-	23524370	23557343	789624	10	1401,944,136,131,154,109,473,190,156,146,	0,1494,3227,7485,7727,10640,12871,22497,30132,35188,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	23522623	23550842	chr16:23522623-23550842	0	-	23522623	23522623	8553170	9	794,944,136,131,174,109,473,50,59,	0,887,2620,6878,7120,10033,12264,21890,28160,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	23523036	23524084	chr16:23523036-23524084	0	-	23523036	23523036	8553170	2	169,121,	0,927,
#Deleted in new
chr16	23523046	23523645	chr16:23523046-23523645	0	-	23523046	23523046	8553170	1	599,	0,
#Partially deleted in new
chr16	23525019	23557731	chr16:23525019-23557731	1	-	23525137	23557343	789624	9	151,136,131,154,109,473,190,156,527,	0,224,4482,4724,7637,9868,19494,27129,32185,
#Partially deleted in new
chr16	23525023	23557344	chr16:23525023-23557344	1	-	23525126	23557343	789624	8	356,131,154,109,473,190,156,140,	0,4478,4720,7633,9864,19490,27125,32181,
#Partially deleted in new
chr16	23532546	23535218	chr16:23532546-23535218	0	-	23532546	23532546	8553170	2	219,331,	0,2341,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	23532747	23535449	chr16:23532747-23535449	0	-	23532747	23532747	8553170	2	18,562,	0,2140,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	23535273	23545262	chr16:23535273-23545262	0	-	23535273	23535273	8553170	3	87,190,262,	0,9240,9727,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	23535319	23557364	chr16:23535319-23557364	0	-	23552223	23557343	789624	5	41,190,156,80,160,	0,9194,16829,17724,21885,
#Partially deleted in new
chr16	23537060	23537556	chr16:23537060-23537556	7	+	23537060	23537060	16724991	2	171,168,	0,328,
#Partially deleted in new
chr16	23544507	23557054	chr16:23544507-23557054	0	-	23544507	23544507	8553170	3	196,156,323,	0,7641,12224,
#Partially deleted in new
chr16	23544513	23557353	chr16:23544513-23557353	0	-	23556901	23557343	789624	4	190,156,38,149,	0,7635,12376,12691,
#Partially deleted in new
chr16	23544540	23557350	chr16:23544540-23557350	0	-	23544540	23544540	8553170	4	163,53,156,146,	0,1841,7608,12664,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	23544564	23557364	chr16:23544564-23557364	0	-	23553022	23557343	789624	4	139,156,117,160,	0,7584,8442,12640,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	23552191	23557355	chr16:23552191-23557355	0	-	23556901	23557343	789624	4	113,80,288,75,	0,852,4698,5089,
#Partially deleted in new
chr16	23552206	23557350	chr16:23552206-23557350	0	-	23552206	23552206	8553170	2	98,461,	0,4683,
#Partially deleted in new
chr16	23557361	23574389	chr16:23557361-23574389	3	+	23557742	23570590	789624	7	406,330,209,66,106,83,3910,	0,588,2106,4844,5263,9625,13118,
#Partially deleted in new
chr16	23557720	23574387	chr16:23557720-23574387	1	+	23557951	23570590	789624	7	25,330,209,66,106,83,3908,	0,229,1747,4485,4904,9266,12759,
#Partially deleted in new
chr16	23557726	23559840	chr16:23557726-23559840	1	+	23557742	23559787	789624	4	41,330,209,62,	0,223,1741,2052,
#Partially deleted in new
chr16	23557736	23564090	chr16:23557736-23564090	0	+	23557736	23557736	8553170	6	31,330,209,66,106,52,	0,213,1731,4469,4888,6302,
#Partially deleted in new
chr16	23557766	23559531	chr16:23557766-23559531	0	+	23557766	23557766	8553170	2	513,64,	0,1701,
#Deleted in new
chr16	23559027	23559868	chr16:23559027-23559868	0	+	23559027	23559027	8553170	2	649,90,	0,751,
#Partially deleted in new
chr16	23561664	23570857	chr16:23561664-23570857	0	+	23561664	23561664	8553170	5	76,66,106,83,378,	0,541,960,5322,8815,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	23561832	23570575	chr16:23561832-23570575	0	+	23561832	23561832	8553170	4	439,106,83,96,	0,792,5154,8647,
#Partially deleted in new
chr16	23564459	23570710	chr16:23564459-23570710	0	+	23564459	23564459	8553170	3	273,83,231,	0,2527,6020,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	23564963	23570858	chr16:23564963-23570858	0	+	23564963	23564963	8553170	2	2106,379,	0,5516,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	23568672	23569696	chr16:23568672-23569696	3	+	23568672	23568672	8553170	1	1024,	0,
#Partially deleted in new
chr16	23581001	23596356	chr16:23581001-23596356	3	-	23582283	23596290	0	5	172,100,88,123,234,	0,1274,4334,6195,15121,
#Partially deleted in new
chr16	23581013	23596277	chr16:23581013-23596277	0	-	23582283	23596277	789624	4	160,100,88,155,	0,1262,4322,15109,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	23581032	23596303	chr16:23581032-23596303	0	-	23595581	23596290	789624	6	141,100,88,123,210,181,	0,1243,4303,6164,14396,15090,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	23581870	23596291	chr16:23581870-23596291	1	-	23582283	23596290	0	4	505,88,123,169,	0,3465,5326,14252,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	23582334	23591153	chr16:23582334-23591153	0	-	23582334	23587277	789624	4	41,88,123,268,	0,3001,4862,8551,
#Partially deleted in new
chr16	23603159	23621389	chr16:23603159-23621389	0	-	23603654	23621389	789624	3	510,88,28,	0,10844,18202,
#Partially deleted in new
chr16	23603167	23641285	chr16:23603167-23641285	1	-	23603458	23635660	789624	13	502,149,88,117,162,86,162,72,830,1473,103,60,159,	0,4696,10836,18194,19801,20841,23068,26036,26472,31694,34682,34902,37959,
#Partially deleted in new
chr16	23603169	23641310	chr16:23603169-23641310	3	-	23603458	23641157	0	13	500,149,88,117,162,86,162,72,830,1473,103,60,201,	0,4694,10834,18192,19799,20839,23066,26034,26470,31692,34680,34900,37940,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	23605840	23624107	chr16:23605840-23624107	3	+	23605840	23605840	8553170	4	116,69,234,208,	0,1474,11759,18059,
#Partially deleted in new
chr16	23624070	23637935	chr16:23624070-23637935	0	-	23629270	23637935	789624	4	24,162,72,86,	0,2165,5133,13779,
#Partially deleted in new
chr16	23636034	23641301	chr16:23636034-23641301	0	-	23636034	23636034	8553170	5	300,103,60,134,192,	0,1815,2035,2424,5075,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	23636282	23640851	chr16:23636282-23640851	0	-	23636282	23640305	789624	4	52,103,60,600,	0,1567,1787,3969,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	23641391	23677455	chr16:23641391-23677455	3	+	23641542	23667144	0	6	199,69,119,112,103,10409,	0,1563,17115,19778,24234,25655,
#Partially deleted in new
chr16	23641470	23667371	chr16:23641470-23667371	1	+	23641542	23667024	0	6	120,69,119,112,103,355,	0,1484,17036,19699,24155,25546,
#Partially deleted in new
chr16	23641475	23667218	chr16:23641475-23667218	0	+	23641542	23661214	789624	5	115,69,112,103,172,	0,1479,19694,24150,25571,
#Partially deleted in new
chr16	23641510	23666017	chr16:23641510-23666017	1	+	23641542	23665745	789624	5	80,69,119,112,392,	0,1444,16996,19659,24115,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	23641512	23665693	chr16:23641512-23665693	0	+	23641542	23658516	789624	6	78,69,101,119,112,68,	0,1442,15973,16994,19657,24113,
#Partially deleted in new
chr16	23641528	23651147	chr16:23641528-23651147	1	+	23641542	23650893	0	3	62,69,392,	0,1426,9227,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	23642586	23665701	chr16:23642586-23665701	0	+	23658515	23665701	789624	4	437,119,112,76,	0,15920,18583,23039,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	23666467	23669872	chr16:23666467-23669872	0	+	23666467	23666467	8553170	1	3405,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	23670010	23673673	chr16:23670010-23673673	3	+	23670010	23670010	8553170	2	2187,822,	0,2841,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	23672131	23675499	chr16:23672131-23675499	0	+	23672131	23672131	8553170	2	66,306,	0,3062,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	23677655	23690366	chr16:23677655-23690366	0	+	23677655	23677655	8553170	9	2597,145,94,220,156,78,155,183,507,	0,3258,4408,6214,9813,11012,11582,11838,12204,
#Partially deleted in new
chr16	23678821	23690367	chr16:23678821-23690367	3	+	23678932	23690063	0	10	519,169,145,94,220,156,78,155,183,508,	0,1262,2092,3242,5048,8647,9846,10416,10672,11038,
#Partially deleted in new
chr16	23678868	23681022	chr16:23678868-23681022	0	+	23678932	23679454	789624	3	632,169,109,	0,1215,2045,
#Partially deleted in new
chr16	23678970	23681054	chr16:23678970-23681054	0	+	23678970	23678970	8553170	3	370,159,55,	0,1113,2029,
#Partially deleted in new
chr16	23679582	23684089	chr16:23679582-23684089	0	+	23681056	23684089	789624	5	83,169,145,94,220,	0,501,1331,2481,4287,
#Partially deleted in new
chr16	23679731	23683948	chr16:23679731-23683948	0	+	23681056	23683948	789624	5	95,169,145,94,79,	0,352,1182,2332,4138,
#Partially deleted in new
chr16	23683901	23687820	chr16:23683901-23687820	0	+	23683901	23683901	8553170	2	188,352,	0,3567,
#Partially deleted in new
chr16	23687048	23687689	chr16:23687048-23687689	3	-	23687048	23687048	8553170	1	641,	0,
#Partially deleted in new
chr16	23687136	23688732	chr16:23687136-23688732	0	+	23687136	23687136	8553170	2	488,65,	0,1531,
#Partially deleted in new
chr16	23688675	23690038	chr16:23688675-23690038	0	+	23688675	23688675	8553170	4	70,155,279,179,	0,562,818,1184,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr16	23690325	23713226	chr16:23690325-23713226	1	-	23690830	23713187	789624	21	718,68,124,128,148,200,100,190,85,166,122,148,79,265,102,108,73,73,34,106,132,	0,803,976,1637,1858,4402,4693,4874,5568,10213,11826,12064,12298,14557,16004,16428,16681,19846,20190,20587,22769,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr16	23690375	23713500	chr16:23690375-23713500	3	-	23690830	23713187	789624	22	668,68,124,128,148,200,100,190,85,166,156,122,148,79,265,102,108,73,73,34,106,406,	0,753,926,1587,1808,4352,4643,4824,5518,10163,10583,11776,12014,12248,14507,15954,16378,16631,19796,20140,20537,22719,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	23690637	23694760	chr16:23690637-23694760	0	-	23692051	23694760	789624	5	406,68,124,128,33,	0,491,664,1325,4090,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	23694853	23713222	chr16:23694853-23713222	0	-	23709186	23713187	789624	16	74,190,85,576,122,148,79,265,102,108,73,100,73,34,106,128,	0,346,1040,5685,7298,7536,7770,10029,11476,11900,12153,14317,15318,15662,16059,18241,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	23696664	23697314	chr16:23696664-23697314	3	-	23696664	23696664	8553170	1	650,	0,
#Deleted in new
chr16	23706219	23706854	chr16:23706219-23706854	0	-	23706219	23706219	8553170	2	212,101,	0,534,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	23706806	23707363	chr16:23706806-23707363	0	-	23706806	23706806	8553170	2	55,357,	0,200,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	23709603	23713210	chr16:23709603-23713210	0	-	23710951	23713187	789624	5	641,34,106,83,116,	0,912,1309,2392,3491,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	23711989	23712793	chr16:23711989-23712793	3	+	23711989	23711989	8553170	2	123,411,	0,393,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	23753688	23755939	chr16:23753688-23755939	3	-	23753688	23753688	8553170	1	2251,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	23754626	23758951	chr16:23754626-23758951	3	+	23755049	23757583	0	7	490,73,81,131,62,123,1422,	0,1034,1220,1436,1761,2574,2903,
#Partially deleted in new
chr16	23835945	24220611	chr16:23835945-24220611	1	+	23836175	24220113	0	17	403,32,83,112,129,157,135,97,147,174,92,63,139,81,108,141,651,	0,1429,152562,196190,199473,256845,258217,277027,287889,318738,336324,338572,344844,349165,349514,355144,384015,
#Partially deleted in new
chr16	23835982	24220611	chr16:23835982-24220611	1	+	23836175	24220113	0	17	366,32,83,112,129,157,135,97,147,174,92,63,139,81,108,141,651,	0,1392,152525,196153,199436,256808,258180,276990,287852,318701,336287,338535,344807,349128,349477,355107,383978,
#Partially deleted in new
chr16	23835982	24220611	chr16:23835982-24220611	3	+	23836175	24214816	0	17	366,32,83,112,129,157,135,97,147,174,92,63,139,81,108,141,5954,	0,1392,152525,196153,199436,256808,258180,276990,287852,318701,336287,338535,344807,349128,349477,355107,378675,
#Partially deleted in new
chr16	23836023	24220611	chr16:23836023-24220611	1	+	23836175	24214816	0	17	325,32,83,112,129,157,135,97,147,174,92,63,139,81,108,141,5954,	0,1351,152484,196112,199395,256767,258139,276949,287811,318660,336246,338494,344766,349087,349436,355066,378634,
#Partially deleted in new
chr16	23836081	23869326	chr16:23836081-23869326	0	+	23836081	23836081	8553170	2	267,213,	0,33032,
#Partially deleted in new
chr16	23836228	23893853	chr16:23836228-23893853	0	+	23836228	23836228	8553170	3	120,32,890,	0,1146,56735,
#Partially deleted in new
chr16	23837222	24113065	chr16:23837222-24113065	0	+	24092816	24113065	789624	4	184,157,135,93,	0,255568,256940,275750,
#Deleted in new
chr16	23962950	23963351	chr16:23962950-23963351	3	+	23962950	23962950	8553170	1	401,	0,
#Partially deleted in new
chr16	23963715	24092839	chr16:23963715-24092839	0	+	23963715	23963715	8553170	5	105,83,112,129,49,	0,24792,68420,71703,129075,
#Partially deleted in new
chr16	24031979	24092860	chr16:24031979-24092860	0	+	24031979	24031979	8553170	3	268,129,70,	0,3439,60811,
#Partially deleted in new
chr16	24035534	24111321	chr16:24035534-24111321	0	+	24035534	24035534	8553170	4	13,157,135,248,	0,57256,58628,75539,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	24098238	24099971	chr16:24098238-24099971	3	+	24098238	24098238	8553170	1	1733,	0,
#Partially deleted in new
chr16	24151684	24180845	chr16:24151684-24180845	0	+	24151849	24180845	789624	5	171,174,92,63,56,	0,2999,20585,22833,29105,
#Partially deleted in new
chr16	24172175	24174930	chr16:24172175-24174930	0	+	24172175	24172175	8553170	2	186,413,	0,2342,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	24174215	24185567	chr16:24174215-24185567	0	+	24174215	24174215	8553170	4	365,139,81,108,	0,6574,10895,11244,
#Partially deleted in new
chr16	24185530	24191588	chr16:24185530-24191588	0	+	24185530	24191419	789624	2	37,499,	0,5559,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	24203115	24203231	chr16:24203115-24203231	3	+	24203115	24203115	5263520	1	116,	0,
#Deleted in new
chr16	24208104	24208478	chr16:24208104-24208478	3	+	24208104	24208104	8553170	1	374,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	24236103	24252863	chr16:24236103-24252863	3	+	24236103	24236103	5263520	4	33,65,199,157,	0,11728,15829,16603,
#Partially deleted in new
chr16	24237981	24247545	chr16:24237981-24247545	1	+	24237981	24237981	8553170	2	52,454,	0,9110,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	24255552	24362801	chr16:24255552-24362801	3	+	24256754	24361863	789624	4	1413,84,141,1450,	0,91181,99280,105799,
#Deleted in new
chr16	24333414	24333547	chr16:24333414-24333547	3	-	24333414	24333414	8553170	1	133,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	24400055	24400117	chr16:24400055-24400117	3	-	24400055	24400055	8553170	1	62,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	24472797	24495177	chr16:24472797-24495177	3	-	24472797	24472797	8553170	2	6316,194,	0,22186,
#Partially deleted in new
chr16	24537692	24570113	chr16:24537692-24570113	0	+	24555665	24570113	789624	15	241,45,89,97,140,173,104,338,97,79,55,69,363,102,1369,	0,15820,17922,18128,18615,21812,23919,24131,25506,25730,25917,27104,29450,30099,31052,
#Partially deleted in new
chr16	24537711	24561665	chr16:24537711-24561665	0	+	24540626	24561665	789624	10	222,181,100,37,45,89,97,140,173,54,	0,2900,8451,11233,15801,17903,18109,18596,21793,23900,
#Partially deleted in new
chr16	24539555	24555859	chr16:24539555-24555859	0	+	24540626	24555859	789624	7	204,181,100,37,45,89,39,	0,1056,6607,9389,13957,16059,16265,
#Partially deleted in new
chr16	24539583	24572863	chr16:24539583-24572863	3	+	24540626	24572445	0	18	1209,100,37,45,89,97,140,173,104,338,97,79,55,69,363,102,1755,1988,	0,6579,9361,13929,16031,16237,16724,19921,22028,22240,23615,23839,24026,25213,27559,28208,29161,31292,
#Partially deleted in new
chr16	24539584	24540284	chr16:24539584-24540284	0	+	24539584	24539584	8553170	2	417,139,	0,561,
#Partially deleted in new
chr16	24540495	24549401	chr16:24540495-24549401	1	+	24540626	24549035	0	3	297,100,457,	0,5667,8449,
#Partially deleted in new
chr16	24540519	24572863	chr16:24540519-24572863	1	+	24540626	24572445	0	11	273,100,37,45,89,97,140,173,104,338,1988,	0,5643,8425,12993,15095,15301,15788,18985,21092,21304,30356,
#Partially deleted in new
chr16	24540573	24572231	chr16:24540573-24572231	0	+	24540626	24572231	789624	19	219,100,37,45,89,97,140,114,173,104,338,97,79,55,69,363,102,1755,1356,	0,5589,8371,12939,15041,15247,15734,17847,18931,21038,21250,22625,22849,23036,24223,26569,27218,28171,30302,
#Partially deleted in new
chr16	24540582	24572863	chr16:24540582-24572863	1	+	24540626	24572445	0	17	210,100,37,45,89,97,140,173,104,338,97,79,55,69,363,1755,1988,	0,5580,8362,12930,15032,15238,15725,18922,21029,21241,22616,22840,23027,24214,26560,28162,30293,
#Deleted in new
chr16	24552992	24554938	chr16:24552992-24554938	0	+	24552992	24552992	8553170	1	1946,	0,
#Partially deleted in new
chr16	24553255	24556333	chr16:24553255-24556333	0	+	24553255	24553255	8553170	4	302,89,97,26,	0,2359,2565,3052,
#Partially deleted in new
chr16	24554476	24572860	chr16:24554476-24572860	0	+	24554476	24554476	8553170	13	1227,97,140,173,104,338,97,79,55,69,363,1755,1985,	0,1344,1831,5028,7135,7347,8722,8946,9133,10320,12666,14268,16399,
#Partially deleted in new
chr16	24555829	24559805	chr16:24555829-24559805	0	+	24555829	24559691	789624	3	88,140,301,	0,478,3675,
#Partially deleted in new
chr16	24563279	24567370	chr16:24563279-24567370	0	+	24563279	24563279	8553170	3	222,55,228,	0,330,3863,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	24610208	24750777	chr16:24610208-24750777	0	+	24610208	24610208	8553170	3	276,126,52,	0,30675,140517,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	24661421	24671062	chr16:24661421-24671062	3	-	24661421	24661421	789624	3	2583,188,136,	0,3416,9505,
#Partially deleted in new
chr16	24729694	24826221	chr16:24729694-24826221	1	+	24729841	24823807	0	24	152,48,88,22,426,2586,177,176,33,81,52,143,138,129,78,211,132,159,141,108,222,71,140,2790,	0,558,21031,28644,47238,59537,63778,64849,66212,67795,68220,74482,75319,75910,76511,76879,79655,85452,87121,88898,90444,92382,93179,93737,
#Partially deleted in new
chr16	24729712	24826227	chr16:24729712-24826227	3	+	24729841	24823807	0	25	134,48,88,22,426,2586,177,176,33,81,52,143,147,138,129,78,211,132,159,141,108,222,71,140,2796,	0,540,21013,28626,47220,59519,63760,64831,66194,67777,68202,74464,74992,75301,75892,76493,76861,79637,85434,87103,88880,90426,92364,93161,93719,
#Partially deleted in new
chr16	24729712	24777027	chr16:24729712-24777027	0	+	24729712	24729712	8553170	3	134,48,95,	0,540,47220,
#Partially deleted in new
chr16	24777247	24826227	chr16:24777247-24826227	0	+	24777247	24778354	789624	22	111,125,2586,177,176,33,81,52,143,147,138,129,78,211,132,159,141,108,222,71,140,2796,	0,1096,11984,16225,17296,18659,20242,20667,26929,27457,27766,28357,28958,29326,32102,37899,39568,41345,42891,44829,45626,46184,
#Partially deleted in new
chr16	24791486	24824786	chr16:24791486-24824786	0	+	24791486	24823807	789624	18	331,176,33,81,52,143,138,129,78,211,132,159,141,108,222,71,140,1355,	0,3057,4420,6003,6428,12690,13527,14118,14719,15087,17863,23660,25329,27106,28652,30590,31387,31945,
#Partially deleted in new
chr16	24791689	24796368	chr16:24791689-24796368	0	+	24791689	24791689	8553170	4	128,177,176,462,	0,1783,2854,4217,
#Partially deleted in new
chr16	24793349	24797503	chr16:24793349-24797503	0	+	24793349	24793349	8553170	4	300,176,33,14,	0,1194,2557,4140,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	24795643	24804290	chr16:24795643-24804290	0	+	24795643	24795643	8553170	4	296,81,52,114,	0,1846,2271,8533,
#Deleted in new
chr16	24797485	24798127	chr16:24797485-24798127	0	+	24797485	24797485	8553170	2	85,213,	0,429,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	24803450	24819739	chr16:24803450-24819739	3	-	24803450	24803450	8553170	2	445,134,	0,16155,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	24803921	24816347	chr16:24803921-24816347	0	+	24803921	24803921	8553170	6	398,720,78,211,132,1201,	0,1092,2284,2652,5428,11225,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	24804333	24816328	chr16:24804333-24816328	0	+	24804333	24804333	8553170	6	818,129,78,211,132,1182,	0,1271,1872,2240,5016,10813,
#Deleted in new
chr16	24804699	24806754	chr16:24804699-24806754	0	+	24804699	24806754	789624	5	152,138,60,78,181,	0,314,974,1506,1874,
#Partially deleted in new
chr16	24806668	24809509	chr16:24806668-24809509	0	+	24806668	24806668	8553170	2	116,160,	0,2681,
#Partially deleted in new
chr16	24806718	24820180	chr16:24806718-24820180	0	+	24806718	24815446	789624	6	66,132,121,141,108,42,	0,2631,8636,10097,11874,13420,
#Partially deleted in new
chr16	24816584	24820210	chr16:24816584-24820210	0	+	24816584	24816584	8553170	3	372,108,72,	0,2008,3554,
#Partially deleted in new
chr16	24818678	24827632	chr16:24818678-24827632	0	+	24818678	24827528	789624	5	22,222,71,140,132,	0,1460,3398,4195,8822,
#Deleted in new
chr16	24821789	24824786	chr16:24821789-24824786	0	+	24821789	24821789	8553170	3	358,140,1355,	0,1084,1642,
#Partially deleted in new
chr16	24845840	24911628	chr16:24845840-24911628	3	+	24858643	24911533	789624	16	598,159,72,105,60,105,106,81,206,136,108,151,169,216,172,301,	0,12779,16760,24060,26319,29786,31417,38210,45028,52133,60816,61184,62122,63040,64465,65487,
#Partially deleted in new
chr16	24845862	24911628	chr16:24845862-24911628	1	+	24858643	24911533	789624	16	150,207,159,72,105,60,106,81,206,136,108,151,169,216,172,301,	0,369,12757,16738,24038,26297,31395,38188,45006,52111,60794,61162,62100,63018,64443,65465,
#Partially deleted in new
chr16	24845862	24911628	chr16:24845862-24911628	1	+	24862657	24911533	789624	15	150,207,72,105,60,105,106,81,136,108,81,169,216,172,301,	0,369,16738,24038,26297,29764,31395,38188,52111,60794,61232,62100,63018,64443,65465,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr16	24845862	24911626	chr16:24845862-24911626	0	+	24858643	24859240	789624	19	150,207,159,109,92,72,105,60,105,106,81,206,136,108,151,169,216,172,299,	0,369,12757,13324,16120,16738,24038,26297,29764,31395,38188,45006,52111,60794,61162,62100,63018,64443,65465,
#Partially deleted in new
chr16	24845862	24911628	chr16:24845862-24911628	1	+	24858643	24911533	789624	15	150,207,159,72,60,106,81,206,136,108,151,169,216,172,301,	0,369,12757,16738,26297,31395,38188,45006,52111,60794,61162,62100,63018,64443,65465,
#Deleted in new
chr16	24845957	24846753	chr16:24845957-24846753	0	+	24845957	24845957	8553170	2	55,522,	0,274,
#Partially deleted in new
chr16	24845988	24911623	chr16:24845988-24911623	1	+	24862657	24911533	789624	16	24,207,72,105,60,105,106,81,206,136,108,151,169,216,172,296,	0,243,16612,23912,26171,29638,31269,38062,44880,51985,60668,61036,61974,62892,64317,65339,
#Partially deleted in new
chr16	24845997	24869966	chr16:24845997-24869966	0	+	24858643	24869966	789624	5	87,207,159,72,66,	0,234,12622,16603,23903,
#Partially deleted in new
chr16	24846230	24911624	chr16:24846230-24911624	1	+	24858643	24911533	789624	15	208,159,72,105,60,106,81,206,136,108,151,169,216,172,297,	0,12389,16370,23670,25929,31027,37820,44638,51743,60426,60794,61732,62650,64075,65097,
#Partially deleted in new
chr16	24846230	24911622	chr16:24846230-24911622	1	+	24858643	24911533	789624	14	208,159,72,60,106,81,206,136,108,151,169,216,172,295,	0,12389,16370,25929,31027,37820,44638,51743,60426,60794,61732,62650,64075,65097,
#Partially deleted in new
chr16	24846230	24911627	chr16:24846230-24911627	1	+	24862657	24911533	789624	14	208,72,105,60,105,106,81,136,108,81,169,216,172,300,	0,16370,23670,25929,29396,31027,37820,51743,60426,60864,61732,62650,64075,65097,
#Partially deleted in new
chr16	24877103	24891002	chr16:24877103-24891002	0	+	24877103	24877103	8553170	3	260,81,134,	0,6947,13765,
#Partially deleted in new
chr16	24919384	25015331	chr16:24919384-25015331	3	-	24920129	25015261	789624	20	876,621,170,234,157,92,114,81,82,112,128,82,69,112,77,112,74,105,40,123,	0,11399,16085,19979,22602,24386,28097,30019,32904,33546,35218,40286,40526,44812,48966,49276,51122,57830,59581,95824,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	24919388	24921004	chr16:24919388-24921004	0	-	24919388	24919388	8553170	1	1616,	0,
#Partially deleted in new
chr16	24919392	25015331	chr16:24919392-25015331	1	-	24920129	25015261	789624	19	868,621,170,157,92,114,81,82,112,128,82,69,112,77,112,74,105,40,123,	0,11391,16077,22594,24378,28089,30011,32896,33538,35210,40278,40518,44804,48958,49268,51114,57822,59573,95816,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	24919392	24936827	chr16:24919392-24936827	0	-	24919392	24919392	8553170	3	868,621,1358,	0,11391,16077,
#Partially deleted in new
chr16	24919394	24931160	chr16:24919394-24931160	0	-	24927724	24931160	789624	3	866,49,377,	0,8289,11389,
#Partially deleted in new
chr16	24919396	24939921	chr16:24919396-24939921	0	-	24919396	24919396	8553170	4	864,621,170,558,	0,11387,16073,19967,
#Partially deleted in new
chr16	24919397	24931400	chr16:24919397-24931400	0	-	24920158	24931400	789624	2	850,617,	0,11386,
#Partially deleted in new
chr16	24919413	24931023	chr16:24919413-24931023	0	-	24929613	24931023	789624	3	847,48,240,	0,10199,11370,
#Partially deleted in new
chr16	24919891	24957536	chr16:24919891-24957536	0	-	24919891	24919891	8553170	11	369,621,170,234,157,92,114,81,82,112,2934,	0,10892,15578,19472,22095,23879,27590,29512,32397,33039,34711,
#Partially deleted in new
chr16	24941695	24943842	chr16:24941695-24943842	0	-	24941695	24941695	8553170	2	448,72,	0,2075,
#Partially deleted in new
chr16	24943834	24954756	chr16:24943834-24954756	0	-	24943834	24943834	8553170	6	28,114,81,82,112,154,	0,3647,5569,8454,9096,10768,
#Partially deleted in new
chr16	24948981	24959981	chr16:24948981-24959981	0	-	24948981	24948981	8553170	6	503,82,112,128,82,71,	0,3307,3949,5621,10689,10929,
#Partially deleted in new
chr16	24949127	24954687	chr16:24949127-24954687	0	-	24949127	24949127	8553170	4	276,82,112,85,	0,3161,3803,5475,
#Partially deleted in new
chr16	24954691	25015261	chr16:24954691-25015261	0	-	24954691	24954691	8553170	9	39,69,112,77,112,74,105,40,53,	0,5219,9505,13659,13969,15815,22523,24274,60517,
#Partially deleted in new
chr16	24959916	25015341	chr16:24959916-25015341	0	-	24959916	25013912	789624	9	63,112,77,112,74,105,40,94,133,	0,4280,8434,8744,10590,17298,19049,53946,55292,
#Partially deleted in new
chr16	24964196	25015337	chr16:24964196-25015337	0	-	24968665	25015261	789624	7	112,77,108,74,105,40,129,	0,4154,4464,6310,13018,14769,51012,
#Partially deleted in new
chr16	24964244	25015300	chr16:24964244-25015300	0	-	24972615	25015261	789624	8	64,77,112,74,38,105,40,92,	0,4106,4416,6262,8351,12970,14721,50964,
#Partially deleted in new
chr16	24964283	24977456	chr16:24964283-24977456	0	-	24964283	24964283	8553170	5	25,77,112,74,242,	0,4067,4377,6223,12931,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	24968350	25015666	chr16:24968350-25015666	0	-	24968350	24970547	789624	6	77,112,74,105,40,166,	0,310,2156,8864,10615,47150,
#Partially deleted in new
chr16	24968561	25015337	chr16:24968561-25015337	0	-	24968561	24968561	8553170	5	211,74,105,40,129,	0,1945,8653,10404,46647,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	25015977	25021023	chr16:25015977-25021023	7	+	25015977	25015977	16724991	3	2280,944,783,	0,2924,4263,
#Deleted in new
chr16	25031743	25032775	chr16:25031743-25032775	5	+	25031743	25031743	16724991	1	1032,	0,
#Partially deleted in new
chr16	25031880	25058109	chr16:25031880-25058109	7	+	25031880	25031880	16724991	2	480,94,	0,26135,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	25066936	25068943	chr16:25066936-25068943	3	+	25066936	25066936	789624	2	710,1165,	0,842,
#Deleted in new
chr16	25069569	25070109	chr16:25069569-25070109	7	+	25069569	25069569	16724991	1	540,	0,
#Deleted in new
chr16	25071489	25072727	chr16:25071489-25072727	7	-	25071489	25071489	16724991	2	420,256,	0,982,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	25085591	25103558	chr16:25085591-25103558	0	-	25085591	25085591	8553170	2	181,208,	0,17759,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	25086332	25111479	chr16:25086332-25111479	3	-	25086332	25086332	8553170	3	391,291,84,	0,17018,25063,
#Deleted in new
chr16	25093386	25095255	chr16:25093386-25095255	7	+	25093386	25093386	16724991	1	1869,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	25100563	25111414	chr16:25100563-25111414	0	-	25100563	25100563	789624	3	122,291,19,	0,2787,10832,
#Partially deleted in new
chr16	25103327	25111555	chr16:25103327-25111555	0	-	25103327	25103327	8553170	2	314,160,	0,8068,
#Deleted in new
chr16	25106568	25107102	chr16:25106568-25107102	3	-	25106568	25106568	8553170	1	534,	0,
#Partially deleted in new
chr16	25111728	25178231	chr16:25111728-25178231	3	+	25111883	25178023	0	11	268,92,122,77,62,103,121,102,92,98,231,	0,16746,20673,28442,39825,49373,52869,57383,58985,63208,66272,
#Partially deleted in new
chr16	25111730	25178231	chr16:25111730-25178231	0	+	25111883	25128504	789624	12	266,163,92,122,77,62,103,121,102,92,98,231,	0,14233,16744,20671,28440,39823,49371,52867,57381,58983,63206,66270,
#Partially deleted in new
chr16	25111734	25178023	chr16:25111734-25178023	1	+	25111883	25178023	0	9	262,92,122,77,121,102,92,98,23,	0,16740,20667,28436,52863,57377,58979,63202,66266,
#Partially deleted in new
chr16	25111734	25178198	chr16:25111734-25178198	0	+	25111883	25140175	789624	9	262,96,122,77,121,102,92,98,198,	0,16740,20667,28436,52863,57377,58979,63202,66266,
#Partially deleted in new
chr16	25111744	25158931	chr16:25111744-25158931	0	+	25111744	25111744	8553170	6	24,92,122,77,62,145,	0,16730,20657,28426,39809,47042,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	25111931	25140503	chr16:25111931-25140503	0	+	25111931	25140251	789624	4	65,92,122,333,	0,16543,20470,28239,
#Partially deleted in new
chr16	25140054	25161168	chr16:25140054-25161168	0	+	25140054	25140054	8553170	2	193,67,	0,21047,
#Partially deleted in new
chr16	25140175	25178082	chr16:25140175-25178082	0	+	25140175	25174951	789624	7	72,62,103,121,102,98,82,	0,11378,20926,24422,28936,34761,37825,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	25140582	25146248	chr16:25140582-25146248	1	-	25140582	25140582	8553170	1	5666,	0,
#Partially deleted in new
chr16	25151524	25161206	chr16:25151524-25161206	0	+	25151524	25151524	8553170	2	91,105,	0,9577,
#Partially deleted in new
chr16	25151530	25178045	chr16:25151530-25178045	0	+	25151530	25151530	8553170	7	85,103,121,102,84,98,45,	0,9571,13067,17581,19183,23406,26470,
#Partially deleted in new
chr16	25164597	25169545	chr16:25164597-25169545	0	+	25164597	25169270	789624	2	121,434,	0,4514,
#Partially deleted in new
chr16	25164689	25178226	chr16:25164689-25178226	0	+	25164689	25178193	789624	4	29,102,92,226,	0,4422,6024,13311,
#Partially deleted in new
chr16	25174745	25178228	chr16:25174745-25178228	0	+	25174745	25174745	8553170	2	289,228,	0,3255,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	25185252	25185538	chr16:25185252-25185538	3	-	25185252	25185252	8553170	1	286,	0,
#Partially deleted in new
chr16	25215730	25228932	chr16:25215730-25228932	1	+	25217203	25228492	789624	6	62,248,127,215,135,489,	0,1467,5726,8631,11337,12713,
#Partially deleted in new
chr16	25216920	25228940	chr16:25216920-25228940	3	+	25217045	25228492	789624	6	137,248,127,215,135,497,	0,277,4536,7441,10147,11523,
#Partially deleted in new
chr16	25236000	25257931	chr16:25236000-25257931	3	-	25239815	25257127	789624	7	4738,492,684,127,92,187,1203,	0,7784,10706,15908,16945,19205,20728,
#Deleted in new
chr16	25238317	25239287	chr16:25238317-25239287	3	+	25238317	25238317	8553170	2	412,98,	0,872,
#Partially deleted in new
chr16	25239493	25257557	chr16:25239493-25257557	0	-	25252025	25257127	789624	7	1245,492,684,138,92,187,829,	0,4291,7213,12415,13452,15712,17235,
#Partially deleted in new
chr16	25246270	25257534	chr16:25246270-25257534	0	-	25246270	25246270	8553170	5	1120,127,92,187,806,	0,5638,6675,8935,10458,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	25257951	25261066	chr16:25257951-25261066	3	+	25257951	25257951	8553170	1	3115,	0,
#Partially deleted in new
chr16	25419813	25424169	chr16:25419813-25424169	3	-	25419813	25419813	8553170	2	347,171,	0,4185,
#Deleted in new
chr16	25454338	25454647	chr16:25454338-25454647	7	-	25454338	25454338	16724991	1	309,	0,
#Partially deleted in new
chr16	25692025	26137688	chr16:25692025-26137688	3	+	25692417	26136248	789624	2	1126,2077,	0,443586,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	25787986	26042347	chr16:25787986-26042347	3	+	25787986	25787986	8553170	4	213,160,66,921,	0,35290,252927,253440,
#Partially deleted in new
chr16	25824709	25826330	chr16:25824709-25826330	7	-	25824709	25824709	16724991	2	166,928,	0,693,
#Partially deleted in new
chr16	25886745	26136207	chr16:25886745-26136207	0	+	25886745	25886745	8553170	2	176,596,	0,248866,
#Deleted in new
chr16	26025236	26025310	chr16:26025236-26025310	3	+	26025236	26025236	5263520	1	74,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	26028911	26029025	chr16:26028911-26029025	7	+	26028911	26028911	16724991	1	114,	0,
#Deleted in new
chr16	26032538	26032811	chr16:26032538-26032811	7	-	26032538	26032538	16724991	1	273,	0,
#Deleted in new
chr16	26062749	26063097	chr16:26062749-26063097	7	-	26062749	26062749	16724991	1	348,	0,
#Partially deleted in new
chr16	26302063	26322540	chr16:26302063-26322540	0	+	26302063	26302063	8553170	2	142,341,	0,20136,
#Partially deleted in new
chr16	26318106	26322544	chr16:26318106-26322544	0	+	26318106	26318106	8553170	2	152,345,	0,4093,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	26318128	26322544	chr16:26318128-26322544	0	+	26318128	26318128	8553170	3	130,209,345,	0,1018,4071,
#Partially deleted in new
chr16	26318145	26334428	chr16:26318145-26334428	3	+	26318145	26318145	8553170	3	113,204,137,	0,4054,16146,
#Partially deleted in new
chr16	26318145	26322981	chr16:26318145-26322981	1	+	26318145	26318145	8553170	2	113,782,	0,4054,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	26322227	26334390	chr16:26322227-26334390	1	+	26322227	26322227	8553170	3	176,119,99,	0,1917,12064,
#Deleted in new
chr16	26322511	26323065	chr16:26322511-26323065	0	+	26322511	26322511	8553170	1	554,	0,
#Partially deleted in new
chr16	26354795	26358355	chr16:26354795-26358355	7	-	26354795	26354795	16724991	6	68,255,395,450,217,115,	0,258,714,1782,3145,3445,
#Partially deleted in new
chr16	26584754	26594813	chr16:26584754-26594813	3	-	26584754	26584754	8553170	2	190,104,	0,9955,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	26721873	26729126	chr16:26721873-26729126	3	+	26721873	26721873	8553170	2	350,367,	0,6886,
#Deleted in new
chr16	27066706	27069165	chr16:27066706-27069165	3	+	27066706	27066706	8553170	1	2459,	0,
#Deleted in new
chr16	27066897	27069165	chr16:27066897-27069165	0	+	27066897	27066897	8553170	1	2268,	0,
#Deleted in new
chr16	27066927	27067858	chr16:27066927-27067858	3	-	27066927	27066927	8553170	2	62,437,	0,494,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	27133482	27135179	chr16:27133482-27135179	7	-	27133482	27133482	16724991	2	856,533,	0,1164,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	27203494	27221768	chr16:27203494-27221768	3	+	27210123	27220730	0	8	142,529,167,133,45,150,93,1203,	0,6598,10090,11381,12450,15466,16898,17071,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	27203507	27211715	chr16:27203507-27211715	0	+	27203507	27203507	8553170	5	129,61,275,40,570,	0,2681,6585,7074,7638,
#Partially deleted in new
chr16	27203516	27213642	chr16:27203516-27213642	0	+	27203516	27203516	8553170	4	120,529,72,58,	0,6576,7629,10068,
#Partially deleted in new
chr16	27203802	27210612	chr16:27203802-27210612	0	+	27210123	27210612	789624	2	63,520,	0,6290,
#Partially deleted in new
chr16	27203974	27220859	chr16:27203974-27220859	1	+	27204092	27220730	0	8	201,529,167,133,45,150,93,294,	0,6118,9610,10901,11970,14986,16418,16591,
#Partially deleted in new
chr16	27203995	27210483	chr16:27203995-27210483	0	+	27210123	27210483	789624	2	169,391,	0,6097,
#Deleted in new
chr16	27204077	27204444	chr16:27204077-27204444	0	+	27204077	27204077	8553170	2	98,162,	0,205,
#Partially deleted in new
chr16	27210123	27221722	chr16:27210123-27221722	1	+	27210123	27220730	0	2	498,1157,	0,10442,
#Deleted in new
chr16	27213307	27214993	chr16:27213307-27214993	3	-	27213307	27213307	8553170	1	1686,	0,
#Partially deleted in new
chr16	27214575	27219063	chr16:27214575-27219063	0	+	27214575	27214575	8553170	3	433,45,103,	0,1369,4385,
#Partially deleted in new
chr16	27214611	27221084	chr16:27214611-27221084	0	+	27214611	27214611	8553170	6	161,133,45,86,93,519,	0,264,1333,4349,5781,5954,
#Partially deleted in new
chr16	27214619	27220667	chr16:27214619-27220667	0	+	27214619	27214619	8553170	5	153,133,45,150,102,	0,256,1325,4341,5946,
#Partially deleted in new
chr16	27214637	27216134	chr16:27214637-27216134	0	+	27214637	27214637	8553170	2	371,190,	0,1307,
#Partially deleted in new
chr16	27214970	27221194	chr16:27214970-27221194	0	+	27214970	27220668	789624	4	38,45,86,629,	0,974,3990,5595,
#Deleted in new
chr16	27220317	27220902	chr16:27220317-27220902	0	+	27220317	27220317	8553170	2	168,337,	0,248,
#Partially deleted in new
chr16	27224990	27268794	chr16:27224990-27268794	3	-	27225156	27257570	0	8	246,121,117,147,78,122,147,89,	0,735,1729,8010,9197,10187,32444,43715,
#Partially deleted in new
chr16	27224994	27268764	chr16:27224994-27268764	0	-	27241812	27257570	789624	10	242,121,117,147,78,122,537,147,212,59,	0,731,1725,8006,9193,10183,16358,32440,43168,43711,
#Partially deleted in new
chr16	27225024	27268741	chr16:27225024-27268741	0	-	27225024	27225024	8553170	7	212,1111,147,78,122,147,36,	0,701,7976,9163,10153,32410,43681,
#Partially deleted in new
chr16	27225143	27230839	chr16:27225143-27230839	0	-	27225143	27225143	8553170	4	93,121,117,249,	0,582,1576,5447,
#Partially deleted in new
chr16	27225171	27233078	chr16:27225171-27233078	0	-	27225194	27233078	789624	3	65,117,78,	0,1548,7829,
#Partially deleted in new
chr16	27226730	27268760	chr16:27226730-27268760	0	-	27241812	27257570	789624	8	106,147,78,122,132,91,147,55,	0,6270,7457,8447,14622,15068,30704,41975,
#Partially deleted in new
chr16	27226736	27268740	chr16:27226736-27268740	0	-	27226736	27257570	789624	6	97,147,78,122,147,35,	0,6264,7451,8441,30698,41969,
#Partially deleted in new
chr16	27233049	27268579	chr16:27233049-27268579	0	-	27233049	27257570	789624	5	98,78,122,147,180,	0,1138,2128,24385,35350,
#Partially deleted in new
chr16	27233069	27258151	chr16:27233069-27258151	0	-	27233069	27257570	789624	5	78,78,122,147,68,	0,1118,2108,24365,25014,
#Partially deleted in new
chr16	27233982	27268762	chr16:27233982-27268762	0	-	27233982	27233982	8553170	4	283,122,147,57,	0,1195,23452,34723,
#Partially deleted in new
chr16	27235214	27268733	chr16:27235214-27268733	0	-	27235214	27257570	789624	4	85,147,212,28,	0,22220,32948,33491,
#Partially deleted in new
chr16	27235215	27268723	chr16:27235215-27268723	0	-	27235215	27235215	8553170	5	84,91,147,212,18,	0,6583,22219,32947,33490,
#Partially deleted in new
chr16	27257341	27268724	chr16:27257341-27268724	0	-	27257341	27257341	8553170	2	240,19,	0,11364,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	27266323	27268728	chr16:27266323-27268728	0	-	27266323	27266323	8553170	2	286,23,	0,2382,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	27268868	27271976	chr16:27268868-27271976	1	+	27268868	27268868	8553170	2	288,2306,	0,802,
#Partially deleted in new
chr16	27286656	27290492	chr16:27286656-27290492	0	+	27286656	27286656	8553170	2	88,248,	0,3588,
#Partially deleted in new
chr16	27313386	27314101	chr16:27313386-27314101	3	-	27313386	27313386	8553170	1	715,	0,
#Partially deleted in new
chr16	27313667	27345020	chr16:27313667-27345020	0	+	27340203	27345020	789624	4	150,88,139,152,	0,26518,28453,31201,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	27313912	27364778	chr16:27313912-27364778	3	+	27340203	27363830	0	11	108,133,88,139,152,152,157,100,79,50,2527,	0,16153,26273,28208,30956,32554,38627,41895,45003,46853,48339,
#Partially deleted in new
chr16	27313922	27342241	chr16:27313922-27342241	0	+	27340203	27342241	789624	3	309,88,121,	0,26263,28198,
#Partially deleted in new
chr16	27313925	27364778	chr16:27313925-27364778	1	+	27340203	27363830	0	10	95,88,139,152,152,157,100,79,50,2527,	0,26260,28195,30943,32541,38614,41882,44990,46840,48326,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	27313925	27340234	chr16:27313925-27340234	0	+	27340203	27340234	789624	4	95,133,102,49,	0,16140,20390,26260,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	27313925	27342154	chr16:27313925-27342154	0	+	27340203	27341200	789624	5	95,133,88,244,34,	0,16140,26260,27144,28195,
#Partially deleted in new
chr16	27313933	27363903	chr16:27313933-27363903	0	+	27340203	27341200	789624	11	87,88,244,139,152,152,157,100,79,50,1652,	0,26252,27136,28187,30935,32533,38606,41874,44982,46832,48318,
#Partially deleted in new
chr16	27313937	27355876	chr16:27313937-27355876	0	+	27340203	27352553	789624	6	83,88,139,152,157,69,	0,26248,28183,30931,38602,41870,
#Partially deleted in new
chr16	27313991	27345020	chr16:27313991-27345020	0	+	27340203	27345020	789624	5	29,133,88,139,152,	0,4643,26194,28129,30877,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	27314029	27345090	chr16:27314029-27345090	0	+	27314029	27314029	8553170	5	29,133,88,139,222,	0,16036,26156,28091,30839,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	27315396	27345039	chr16:27315396-27345039	0	+	27315396	27315396	8553170	5	170,133,88,139,171,	0,14669,24789,26724,29472,
#Partially deleted in new
chr16	27340203	27341200	chr16:27340203-27341200	1	+	27340203	27341200	789624	2	70,131,	0,866,
#Partially deleted in new
chr16	27341288	27364777	chr16:27341288-27364777	1	+	27341288	27363830	0	9	25,139,152,152,157,100,79,50,2526,	0,832,3580,5178,11251,14519,17627,19477,20963,
#Partially deleted in new
chr16	27342030	27346618	chr16:27342030-27346618	0	+	27342030	27342030	8553170	3	229,152,152,	0,2838,4436,
#Deleted in new
chr16	27344907	27345602	chr16:27344907-27345602	0	+	27344907	27345219	789624	2	113,418,	0,277,
#Partially deleted in new
chr16	27352549	27362373	chr16:27352549-27362373	0	+	27352549	27362373	789624	6	147,100,79,50,81,122,	0,3258,6366,8216,8390,9702,
#Partially deleted in new
chr16	27352674	27364297	chr16:27352674-27364297	0	+	27352674	27364275	789624	5	22,100,79,28,195,	0,3133,6241,8091,11428,
#Partially deleted in new
chr16	27354082	27362483	chr16:27354082-27362483	0	+	27354082	27354082	8553170	5	80,100,79,50,232,	0,1725,4833,6683,8169,
#Partially deleted in new
chr16	27355347	27362296	chr16:27355347-27362296	0	+	27355347	27355347	8553170	4	560,79,50,45,	0,3568,5418,6904,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	27402161	27452042	chr16:27402161-27452042	3	+	27430071	27449283	0	9	457,65,103,200,155,178,100,82,3509,	0,27894,32185,35326,40800,42380,43015,43845,46372,
#Partially deleted in new
chr16	27402173	27450073	chr16:27402173-27450073	1	+	27430071	27449283	0	10	445,141,65,103,200,155,178,100,82,1540,	0,906,27882,32173,35314,40788,42368,43003,43833,46360,
#Partially deleted in new
chr16	27427243	27450485	chr16:27427243-27450485	1	+	27430071	27449283	0	9	118,65,103,200,155,178,100,82,1952,	0,2812,7103,10244,15718,17298,17933,18763,21290,
#Partially deleted in new
chr16	27442669	27444690	chr16:27442669-27444690	0	+	27442669	27442669	8553170	2	447,149,	0,1872,
#Partially deleted in new
chr16	27443966	27448674	chr16:27443966-27448674	0	+	27443966	27443966	8553170	5	67,178,98,82,141,	0,575,1212,2040,4567,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	27447668	27453393	chr16:27447668-27453393	3	-	27447668	27447668	789624	3	2138,180,297,	0,5074,5428,
#Deleted in new
chr16	27459554	27460980	chr16:27459554-27460980	0	-	27459554	27459554	8553170	2	59,525,	0,901,
#Partially deleted in new
chr16	27460612	27549913	chr16:27460612-27549913	1	-	27461349	27549890	789624	37	950,193,52,442,281,260,288,173,94,63,113,82,143,158,189,82,136,142,178,97,98,146,282,185,104,154,137,218,310,116,153,124,97,144,177,210,244,	0,1681,2928,3782,4647,8678,9495,11135,15838,17856,20466,22431,23598,25384,27614,27941,28430,28989,31725,32004,32586,34150,34598,37024,38017,40578,42246,45286,46234,47927,51136,67985,72678,77171,77567,84701,89057,
#Deleted in new
chr16	27460675	27463473	chr16:27460675-27463473	0	-	27460675	27460675	8553170	1	2798,	0,
#Partially deleted in new
chr16	27460677	27549906	chr16:27460677-27549906	3	-	27461349	27549890	789624	37	885,193,52,517,281,260,288,173,94,63,113,82,143,158,189,82,136,142,178,97,98,146,282,185,104,154,137,218,310,116,153,124,97,144,177,210,237,	0,1616,2863,3642,4582,8613,9430,11070,15773,17791,20401,22366,23533,25319,27549,27876,28365,28924,31660,31939,32521,34085,34533,36959,37952,40513,42181,45221,46169,47862,51071,67920,72613,77106,77502,84636,88992,
#Partially deleted in new
chr16	27461096	27502916	chr16:27461096-27502916	0	-	27461349	27502916	789624	6	466,193,52,90,38,58,	0,1197,2444,3223,40210,41762,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	27461295	27466327	chr16:27461295-27466327	0	-	27461295	27461295	8553170	4	267,193,1296,1068,	0,998,2245,3964,
#Deleted in new
chr16	27469401	27470719	chr16:27469401-27470719	0	-	27469401	27469401	8553170	3	149,288,37,	0,706,1281,
#Partially deleted in new
chr16	27470108	27476528	chr16:27470108-27476528	0	-	27471743	27476528	789624	3	287,356,78,	0,1456,6342,
#Partially deleted in new
chr16	27470222	27478594	chr16:27470222-27478594	0	-	27470222	27470222	8553170	4	173,173,94,126,	0,1525,6228,8246,
#Partially deleted in new
chr16	27471790	27489123	chr16:27471790-27489123	0	-	27486079	27489123	789624	8	130,94,63,143,143,197,82,81,	0,4660,6678,12420,14206,16428,16763,17252,
#Deleted in new
chr16	27480715	27484297	chr16:27480715-27484297	0	-	27480715	27480715	8553170	3	476,82,87,	0,2328,3495,
#Partially deleted in new
chr16	27481114	27488231	chr16:27481114-27488231	0	-	27481114	27488231	789624	6	77,75,82,143,158,5,	0,1396,1929,3096,4882,7112,
#Deleted in new
chr16	27483137	27486063	chr16:27483137-27486063	0	-	27483137	27483137	8553170	3	295,143,67,	0,1073,2859,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	27550132	27574295	chr16:27550132-27574295	0	+	27550132	27550132	8553170	2	45,395,	0,23768,
#Partially deleted in new
chr16	27550151	27780369	chr16:27550151-27780369	3	+	27550170	27778629	789624	28	26,56,77,170,98,132,268,132,173,66,107,103,216,138,880,723,206,79,178,166,158,65,111,140,102,161,89,1796,	0,23749,68273,78509,80913,98452,127577,131247,148176,149382,151437,153744,158553,171406,189889,199432,201567,204021,211261,216157,219709,221436,222947,224793,226776,227458,227729,228422,
#Partially deleted in new
chr16	27573906	27677818	chr16:27573906-27677818	0	+	27573906	27677818	789624	7	50,77,170,98,132,129,90,	0,44518,54754,57158,74697,80701,103822,
#Partially deleted in new
chr16	27573921	27677931	chr16:27573921-27677931	0	+	27573921	27628792	789624	6	35,170,98,132,129,203,	0,54739,57143,74682,80686,103807,
#Partially deleted in new
chr16	27618469	27631254	chr16:27618469-27631254	0	+	27618469	27631195	789624	3	32,170,190,	0,10191,12595,
#Partially deleted in new
chr16	27628587	27654698	chr16:27628587-27654698	0	+	27628587	27628587	8553170	4	243,98,132,91,	0,2477,20016,26020,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	27632463	27727873	chr16:27632463-27727873	0	+	27632463	27632463	8553170	12	140,132,129,268,132,173,66,107,103,216,138,658,	0,16140,22144,45265,48935,65864,67070,69125,71432,76241,89094,94752,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	27643198	27644663	chr16:27643198-27644663	3	+	27643198	27643198	8553170	2	161,431,	0,1034,
#Deleted in new
chr16	27687181	27687522	chr16:27687181-27687522	3	+	27687181	27687181	8553170	1	341,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	27698327	27755752	chr16:27698327-27755752	0	+	27698327	27698327	8553170	8	173,107,103,207,138,723,206,1580,	0,3261,5568,10386,23230,51256,53391,55845,
#Partially deleted in new
chr16	27701433	27703954	chr16:27701433-27703954	0	+	27701433	27701433	8553170	2	262,59,	0,2462,
#Partially deleted in new
chr16	27708420	27718294	chr16:27708420-27718294	0	-	27708420	27708420	8553170	2	498,52,	0,9822,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	27708420	27718806	chr16:27708420-27718806	1	-	27708420	27708420	8553170	3	731,122,94,	0,9913,10292,
#Partially deleted in new
chr16	27708425	27718776	chr16:27708425-27718776	0	-	27708425	27708425	8553170	3	493,122,64,	0,9908,10287,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	27722283	27722392	chr16:27722283-27722392	3	-	27722283	27722283	8553170	1	109,	0,
#Deleted in new
chr16	27776865	27778729	chr16:27776865-27778729	0	+	27776865	27776865	8553170	4	164,161,89,156,	0,744,1015,1708,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	27787534	28063509	chr16:27787534-28063509	3	-	27791369	28063424	789624	7	3933,68,168,112,153,48,434,	0,19952,41254,57415,96951,175621,275541,
#Partially deleted in new
chr16	27790890	28063501	chr16:27790890-28063501	1	-	27791369	28063424	789624	6	577,68,168,112,48,426,	0,16596,37898,54059,172265,272185,
#Partially deleted in new
chr16	27790893	27888157	chr16:27790893-27888157	1	-	27791369	27884570	789624	6	574,68,168,112,153,98,	0,16593,37895,54056,93592,97166,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	27791369	27884570	chr16:27791369-27884570	1	-	27791369	27884570	789624	6	98,68,54,168,112,85,	0,16117,32492,37419,53580,93116,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	27823875	28063188	chr16:27823875-28063188	0	-	27844991	28063188	789624	7	40,168,112,145,153,48,113,	0,4913,21074,26603,60610,139280,239200,
#Deleted in new
chr16	27863250	27863356	chr16:27863250-27863356	3	+	27863250	27863250	8553170	1	106,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	27998294	27998401	chr16:27998294-27998401	3	-	27998294	27998294	8553170	1	107,	0,
#Partially deleted in new
chr16	28097978	28211550	chr16:28097978-28211550	1	-	28098537	28180992	789624	25	661,231,99,162,172,115,156,190,147,145,93,160,70,93,109,110,127,454,78,160,198,113,91,136,185,	0,3479,3868,6567,8064,8404,9543,13838,14925,19339,23691,27710,34355,35862,37237,48115,54680,58095,68529,71771,77919,79241,82962,111008,113387,
#Partially deleted in new
chr16	28097994	28211869	chr16:28097994-28211869	3	-	28098537	28211368	789624	24	645,231,99,162,172,115,156,190,147,145,93,160,70,93,109,110,127,454,78,160,198,113,91,504,	0,3463,3852,6551,8048,8388,9527,13822,14909,19323,23675,27694,34339,35846,37221,48099,54664,58079,68513,71755,77903,79225,82946,113371,
#Partially deleted in new
chr16	28097994	28101933	chr16:28097994-28101933	0	-	28098537	28101933	789624	3	624,231,87,	0,3463,3852,
#Deleted in new
chr16	28101054	28101915	chr16:28101054-28101915	0	-	28101295	28101915	789624	2	634,69,	0,792,
#Deleted in new
chr16	28101269	28101986	chr16:28101269-28101986	0	-	28101269	28101269	8553170	2	419,140,	0,577,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	28105688	28106422	chr16:28105688-28106422	0	-	28105688	28105688	8553170	2	526,40,	0,694,
#Deleted in new
chr16	28106111	28111890	chr16:28106111-28111890	0	-	28106111	28111890	789624	4	103,70,156,74,	0,271,1410,5705,
#Deleted in new
chr16	28107528	28112958	chr16:28107528-28112958	0	-	28107528	28107528	8553170	3	149,126,55,	0,4288,5375,
#Partially deleted in new
chr16	28107587	28133925	chr16:28107587-28133925	0	-	28112974	28133925	789624	7	90,190,147,93,160,70,85,	0,4229,5316,14082,18101,24746,26253,
#Deleted in new
chr16	28111172	28111647	chr16:28111172-28111647	7	-	28111172	28111172	16724991	1	475,	0,
#Partially deleted in new
chr16	28117036	28132363	chr16:28117036-28132363	0	-	28117036	28117036	8553170	4	426,93,160,30,	0,4633,8652,15297,
#Partially deleted in new
chr16	28125768	28146303	chr16:28125768-28146303	0	-	28125768	28125768	8553170	5	80,70,93,109,210,	0,6565,8072,9447,20325,
#Partially deleted in new
chr16	28125828	28152918	chr16:28125828-28152918	0	-	28125828	28125828	8553170	6	20,70,93,109,110,260,	0,6505,8012,9387,20265,26830,
#Partially deleted in new
chr16	28125831	28146249	chr16:28125831-28146249	0	-	28125831	28125831	8553170	6	17,143,70,93,109,156,	0,786,6502,8009,9384,20262,
#Partially deleted in new
chr16	28132397	28155975	chr16:28132397-28155975	0	-	28132397	28132397	8553170	9	6,93,109,110,127,35,25,70,30,	0,1443,2818,13696,20261,20532,22190,23304,23548,
#Partially deleted in new
chr16	28146090	28153209	chr16:28146090-28153209	0	-	28146090	28146090	8553170	3	113,127,280,	0,6568,6839,
#Partially deleted in new
chr16	28146161	28156117	chr16:28146161-28156117	0	-	28152948	28156117	789624	4	42,127,35,44,	0,6497,6768,9912,
#Partially deleted in new
chr16	28146171	28169901	chr16:28146171-28169901	0	-	28146171	28169901	789624	4	32,127,454,152,	0,6487,9902,23578,
#Deleted in new
chr16	28155596	28156332	chr16:28155596-28156332	0	-	28155596	28155596	8553170	2	379,259,	0,477,
#Partially deleted in new
chr16	28156132	28165419	chr16:28156132-28165419	0	-	28156132	28156132	8553170	2	395,149,	0,9138,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	28156314	28173122	chr16:28156314-28173122	0	-	28156314	28156314	8553170	4	213,78,160,58,	0,10193,13435,16750,
#Partially deleted in new
chr16	28169844	28181122	chr16:28169844-28181122	0	-	28169844	28180992	789624	4	65,198,113,182,	0,6053,7375,11096,
#Partially deleted in new
chr16	28176057	28211476	chr16:28176057-28211476	0	-	28176057	28177246	789624	3	38,113,111,	0,1162,35308,
#Partially deleted in new
chr16	28179097	28179223	chr16:28179097-28179223	3	+	28179097	28179097	8553170	1	126,	0,
#Partially deleted in new
chr16	28180940	28211920	chr16:28180940-28211920	0	-	28180940	28180992	789624	3	91,69,555,	0,28046,30425,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	28183317	28183430	chr16:28183317-28183430	3	+	28183317	28183317	8553170	1	113,	0,
#Partially deleted in new
chr16	28239692	28240668	chr16:28239692-28240668	7	-	28239692	28239692	16724991	1	976,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	28258685	28292173	chr16:28258685-28292173	3	+	28258685	28258685	8553170	2	817,1864,	0,31624,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	28284884	28292064	chr16:28284884-28292064	3	-	28284884	28284884	8553170	2	2183,298,	0,6882,
#Partially deleted in new
chr16	28292518	28323849	chr16:28292518-28323849	3	+	28317391	28320921	789624	4	782,233,203,3774,	0,24866,26476,27557,
#Partially deleted in new
chr16	28341436	28341543	chr16:28341436-28341543	7	+	28341436	28341436	16724991	1	107,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	28342554	28363508	chr16:28342554-28363508	3	-	28342606	28362822	789624	7	634,36,61,196,100,183,806,	0,1993,2138,6279,6587,10324,20148,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	28342554	28356654	chr16:28342554-28356654	1	-	28342606	28356601	789624	7	634,36,61,196,100,183,119,	0,1993,2138,6279,6587,10324,13981,
#Partially deleted in new
chr16	28364699	28365333	chr16:28364699-28365333	7	+	28364699	28364699	16724991	1	634,	0,
#Partially deleted in new
chr16	28379578	28403841	chr16:28379578-28403841	1	-	28379797	28403618	789624	21	302,163,88,66,160,364,225,191,94,126,142,104,163,128,110,55,126,190,66,131,59,	0,397,713,889,1053,3539,8479,8929,10712,10941,11261,12173,12401,20292,20798,21036,21280,21628,21960,23939,24204,
#Partially deleted in new
chr16	28379580	28403879	chr16:28379580-28403879	3	-	28379797	28403618	789624	21	300,163,88,66,160,364,225,191,94,126,142,104,163,128,110,55,126,190,66,131,93,	0,395,711,887,1051,3537,8477,8927,10710,10939,11259,12171,12399,20290,20796,21034,21278,21626,21958,23937,24206,
#Deleted in new
chr16	28390981	28391051	chr16:28390981-28391051	3	-	28390981	28390981	5263520	1	70,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	28413702	28415018	chr16:28413702-28415018	7	+	28413702	28413702	16724991	2	423,606,	0,710,
#Partially deleted in new
chr16	28451643	28455356	chr16:28451643-28455356	7	+	28451643	28451643	16724991	2	151,105,	0,3608,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	28454140	28454511	chr16:28454140-28454511	3	-	28454140	28454140	8553170	1	371,	0,
#Duplicated in new
chr16	28456370	28492041	chr16:28456370-28492041	1	-	28477515	28491759	8553170	23	656,36,61,196,100,183,125,172,141,94,56,69,47,113,144,73,86,80,72,97,79,122,22,	0,2015,2160,6303,6611,10349,19880,21093,21366,25734,25956,26106,26255,27635,29976,30207,31085,31291,32220,32919,35111,35343,35649,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	28456371	28470547	chr16:28456371-28470547	3	-	28456423	28470438	789624	7	655,36,61,196,100,183,175,	0,2014,2159,6302,6610,10348,14001,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	28456423	28471175	chr16:28456423-28471175	1	-	28456423	28471175	789624	7	603,36,61,196,100,183,87,	0,1962,2107,6250,6558,10296,14665,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr16	28456711	28491801	chr16:28456711-28491801	0	-	28456711	28456711	8553170	20	315,36,61,196,100,183,172,141,94,56,196,113,144,73,86,80,72,97,79,88,	0,1674,1819,5962,6270,10008,20752,21025,25393,25615,25765,27294,29635,29866,30744,30950,31879,32578,34770,35002,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	28456718	28482634	chr16:28456718-28482634	0	-	28456718	28482634	789624	10	308,36,61,196,100,183,94,56,69,9,	0,1667,1812,5955,6263,10001,25386,25608,25758,25907,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	28466652	28492012	chr16:28466652-28492012	0	-	28477515	28489349	789624	14	250,172,141,94,56,69,47,113,144,73,86,80,97,299,	0,10811,11084,15452,15674,15824,15973,17353,19694,19925,20803,21009,22637,25061,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr16	28466669	28492098	chr16:28466669-28492098	0	-	28486634	28491759	789624	21	233,130,88,86,125,117,172,141,94,56,69,47,113,144,73,86,72,97,79,122,79,	0,3018,3703,4419,9581,10342,10794,11067,15435,15657,15807,15956,17336,19677,19908,20786,21921,22620,24812,25044,25350,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr16	28466669	28492047	chr16:28466669-28492047	0	-	28477627	28491759	789624	20	233,88,86,125,619,141,94,56,69,47,113,144,73,86,80,72,97,79,122,28,	0,3703,4419,9581,10342,11067,15435,15657,15807,15956,17336,19677,19908,20786,20992,21921,22620,24812,25044,25350,
#Duplicated in new
chr16	28466673	28492047	chr16:28466673-28492047	0	-	28489320	28491759	789624	20	229,88,86,125,172,141,94,56,69,47,113,144,73,86,80,72,97,32,122,28,	0,3699,4415,9577,10790,11063,15431,15653,15803,15952,17332,19673,19904,20782,20988,21917,22616,24808,25040,25346,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	28466695	28482544	chr16:28466695-28482544	0	-	28477515	28482544	789624	10	207,88,86,125,117,172,141,94,56,68,	0,3677,4393,9555,10316,10768,11041,15409,15631,15781,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr16	28466793	28492074	chr16:28466793-28492074	0	-	28477515	28491759	8553170	17	109,624,141,94,56,69,47,113,144,73,86,80,72,97,79,122,55,	0,10218,10943,15311,15533,15683,15832,17212,19553,19784,20662,20868,21797,22496,24688,24920,25226,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	28474110	28492070	chr16:28474110-28492070	1	-	28474154	28491759	789624	14	152,94,56,65,113,144,73,86,80,72,97,79,122,51,	0,7994,8216,8497,9895,12236,12467,13345,13551,14480,15179,17371,17603,17909,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	28475350	28492293	chr16:28475350-28492293	1	-	28477515	28491759	789624	16	2285,141,94,56,69,47,113,144,73,86,80,72,97,79,122,274,	0,2386,6754,6976,7126,7275,8655,10996,11227,12105,12311,13240,13939,16131,16363,16669,
#Partially deleted in new
chr16	28477271	28492074	chr16:28477271-28492074	1	-	28477515	28491759	789624	15	364,141,94,56,69,47,113,144,73,86,80,72,97,79,361,	0,465,4833,5055,5205,5354,6734,9075,9306,10184,10390,11319,12018,14210,14442,
#Partially deleted in new
chr16	28477278	28492302	chr16:28477278-28492302	1	-	28477515	28491759	789624	15	357,141,94,56,69,47,113,144,73,86,80,97,79,122,283,	0,458,4826,5048,5198,5347,6727,9068,9299,10177,10383,12011,14203,14435,14741,
#Partially deleted in new
chr16	28477278	28486363	chr16:28477278-28486363	0	-	28477515	28486363	789624	9	81,172,141,94,56,69,47,113,17,	0,185,458,4826,5048,5198,5347,6727,9068,
#Partially deleted in new
chr16	28477278	28492082	chr16:28477278-28492082	1	-	28477515	28491759	789624	12	357,69,47,113,144,73,86,80,72,97,79,369,	0,5198,5347,6727,9068,9299,10177,10383,11312,12011,14203,14435,
#Partially deleted in new
chr16	28477279	28492005	chr16:28477279-28492005	1	-	28477515	28489349	789624	14	356,141,94,56,69,47,113,144,73,86,80,72,97,292,	0,457,4825,5047,5197,5346,6726,9067,9298,10176,10382,11311,12010,14434,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	28477279	28494576	chr16:28477279-28494576	0	-	28477279	28477279	8553170	15	356,141,94,346,113,144,73,86,80,72,97,79,122,196,1082,	0,457,4825,5047,6726,9067,9298,10176,10382,11311,12010,14202,14434,14740,16215,
#Partially deleted in new
chr16	28477284	28491891	chr16:28477284-28491891	1	-	28477515	28491759	789624	14	351,141,94,56,69,47,113,144,73,86,80,97,79,178,	0,452,4820,5042,5192,5341,6721,9062,9293,10171,10377,12005,14197,14429,
#Partially deleted in new
chr16	28477288	28492044	chr16:28477288-28492044	0	-	28477288	28477288	8553170	14	347,141,278,69,47,113,144,73,86,80,72,97,79,331,	0,448,4816,5188,5337,6717,9058,9289,10167,10373,11302,12001,14193,14425,
#Partially deleted in new
chr16	28477290	28491983	chr16:28477290-28491983	1	-	28477515	28491759	789624	12	345,141,94,56,69,47,113,86,72,97,79,270,	0,446,4814,5036,5186,5335,6715,10165,11300,11999,14191,14423,
#Partially deleted in new
chr16	28477290	28492023	chr16:28477290-28492023	1	-	28477515	28489349	789624	11	345,141,94,56,69,47,113,86,72,97,310,	0,446,4814,5036,5186,5335,6715,10165,11300,11999,14423,
#Partially deleted in new
chr16	28477293	28492070	chr16:28477293-28492070	0	-	28477293	28477293	8553170	13	342,141,568,113,144,73,86,80,72,97,79,122,51,	0,443,4811,6712,9053,9284,10162,10368,11297,11996,14188,14420,14726,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr16	28477293	28495550	chr16:28477293-28495550	3	-	28477515	28491759	789624	17	342,141,94,56,69,47,113,144,73,86,80,72,97,79,122,196,2056,	0,443,4811,5033,5183,5332,6712,9053,9284,10162,10368,11297,11996,14188,14420,14726,16201,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	28477304	28484946	chr16:28477304-28484946	0	-	28477304	28477304	8553170	7	331,141,94,56,69,47,941,	0,432,4800,5022,5172,5321,6701,
#Partially deleted in new
chr16	28477318	28492302	chr16:28477318-28492302	0	-	28486634	28491759	789624	14	317,141,94,56,69,47,113,144,73,86,72,97,354,283,	0,418,4786,5008,5158,5307,6687,9028,9259,10137,11272,11971,14163,14701,
#Partially deleted in new
chr16	28477330	28488604	chr16:28477330-28488604	0	-	28477330	28477330	8553170	11	29,172,141,94,346,113,144,73,86,80,14,	0,133,406,4774,4996,6675,9016,9247,10125,10331,11260,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	28477355	28492042	chr16:28477355-28492042	0	-	28477355	28477355	8553170	12	280,141,122,568,113,144,73,1207,97,79,122,23,	0,381,2288,4749,6650,8991,9222,10100,11934,14126,14358,14664,
#Partially deleted in new
chr16	28477360	28492023	chr16:28477360-28492023	0	-	28486634	28489349	789624	13	275,141,94,56,69,47,113,144,73,86,72,97,310,	0,376,4744,4966,5116,5265,6645,8986,9217,10095,11230,11929,14353,
#Partially deleted in new
chr16	28477386	28484014	chr16:28477386-28484014	0	-	28477386	28477386	8553170	6	249,141,94,219,47,9,	0,350,4718,4940,5239,6619,
#Partially deleted in new
chr16	28477432	28492074	chr16:28477432-28492074	1	-	28477515	28489349	789624	15	203,141,94,56,69,47,113,144,73,86,80,72,97,122,55,	0,304,4672,4894,5044,5193,6573,8914,9145,10023,10229,11158,11857,14281,14587,
#Partially deleted in new
chr16	28477447	28492046	chr16:28477447-28492046	0	-	28477447	28477447	8553170	15	188,141,278,69,47,113,144,73,86,80,72,97,79,122,27,	0,289,4657,5029,5178,6558,8899,9130,10008,10214,11143,11842,14034,14266,14572,
#Partially deleted in new
chr16	28477451	28492074	chr16:28477451-28492074	0	-	28486634	28491759	789624	13	184,141,94,346,113,144,73,86,72,97,79,122,55,	0,285,4653,4875,6554,8895,9126,10004,11139,11838,14030,14262,14568,
#Partially deleted in new
chr16	28477463	28491759	chr16:28477463-28491759	1	-	28477515	28491759	789624	14	172,141,94,56,65,113,144,73,86,80,72,97,79,46,	0,273,4641,4863,5144,6542,8883,9114,9992,10198,11127,11826,14018,14250,
#Partially deleted in new
chr16	28477471	28492036	chr16:28477471-28492036	0	-	28484091	28491759	789624	10	164,141,94,56,69,47,113,97,79,323,	0,265,4633,4855,5005,5154,6534,11818,14010,14242,
#Partially deleted in new
chr16	28477482	28491856	chr16:28477482-28491856	1	-	28477515	28489349	789624	13	153,141,94,56,69,47,113,73,86,80,72,97,143,	0,254,4622,4844,4994,5143,6523,9095,9973,10179,11108,11807,14231,
#Partially deleted in new
chr16	28477515	28491759	chr16:28477515-28491759	1	-	28477515	28491759	789624	14	120,141,94,56,69,47,113,73,86,80,72,97,79,46,	0,221,4589,4811,4961,5110,6490,9062,9940,10146,11075,11774,13966,14198,
#Partially deleted in new
chr16	28477515	28491759	chr16:28477515-28491759	0	-	28484091	28491759	789624	11	120,141,94,56,69,47,113,86,80,79,46,	0,221,4589,4811,4961,5110,6490,9940,10146,13966,14198,
#Partially deleted in new
chr16	28477515	28492061	chr16:28477515-28492061	0	-	28486634	28489349	789624	13	120,141,278,69,47,113,144,73,86,72,97,122,42,	0,221,4589,4961,5110,6490,8831,9062,9940,11075,11774,14198,14504,
#Partially deleted in new
chr16	28477515	28492058	chr16:28477515-28492058	0	-	28486634	28491759	789624	14	120,141,94,56,69,47,113,144,73,86,72,97,79,345,	0,221,4589,4811,4961,5110,6490,8831,9062,9940,11075,11774,13966,14198,
#Partially deleted in new
chr16	28477515	28489349	chr16:28477515-28489349	1	-	28477515	28489349	789624	12	120,141,94,56,69,47,113,144,73,86,80,60,	0,221,4589,4811,4961,5110,6490,8831,9062,9940,10146,11774,
#Partially deleted in new
chr16	28477515	28491759	chr16:28477515-28491759	0	-	28484032	28491759	789624	12	120,141,278,69,47,113,86,80,72,97,79,46,	0,221,4589,4961,5110,6490,9940,10146,11075,11774,13966,14198,
#Partially deleted in new
chr16	28477520	28491832	chr16:28477520-28491832	0	-	28484032	28491759	789624	13	115,141,94,56,69,47,113,86,80,72,97,79,119,	0,216,4584,4806,4956,5105,6485,9935,10141,11070,11769,13961,14193,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	28477537	28484882	chr16:28477537-28484882	0	-	28477537	28477537	8553170	4	98,141,568,877,	0,199,4567,6468,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	28477556	28491835	chr16:28477556-28491835	0	-	28477556	28477556	8553170	15	79,141,98,94,56,69,47,113,178,964,80,72,97,79,122,	0,180,2087,4548,4770,4920,5069,6449,8790,9021,10105,11034,11733,13925,14157,
#Partially deleted in new
chr16	28477813	28484302	chr16:28477813-28484302	0	-	28477813	28477813	8553170	4	64,94,346,297,	0,4291,4513,6192,
#Partially deleted in new
chr16	28482104	28492036	chr16:28482104-28492036	0	-	28482104	28491759	789624	10	94,56,69,47,113,144,73,86,79,323,	0,222,372,521,1901,4242,4473,5351,9377,9609,
#Partially deleted in new
chr16	28482105	28491996	chr16:28482105-28491996	0	-	28482105	28482191	789624	7	93,56,69,47,113,97,283,	0,221,371,520,1900,7184,9608,
#Partially deleted in new
chr16	28482177	28492070	chr16:28482177-28492070	0	-	28482177	28482177	8553170	12	205,69,47,113,144,73,86,80,72,97,122,51,	0,299,448,1828,4169,4400,5278,5484,6413,7112,9536,9842,
#Partially deleted in new
chr16	28482327	28492011	chr16:28482327-28492011	0	-	28482327	28482327	8553170	6	345,113,86,72,97,298,	0,1678,5128,6263,6962,9386,
#Partially deleted in new
chr16	28482511	28492248	chr16:28482511-28492248	0	-	28482511	28482511	8553170	10	161,113,144,73,86,80,72,97,354,229,	0,1494,3835,4066,4944,5150,6079,6778,8970,9508,
#Partially deleted in new
chr16	28482512	28491946	chr16:28482512-28491946	0	-	28482512	28491759	789624	7	33,47,113,86,97,79,233,	0,113,1493,4943,6777,8969,9201,
#Partially deleted in new
chr16	28482515	28491826	chr16:28482515-28491826	0	-	28482515	28482515	8553170	6	30,47,113,86,72,113,	0,110,1490,4940,6075,9198,
#Partially deleted in new
chr16	28482635	28492047	chr16:28482635-28492047	0	-	28482635	28491759	789624	8	37,113,86,72,97,79,122,28,	0,1370,4820,5955,6654,8846,9078,9384,
#Partially deleted in new
chr16	28484016	28492063	chr16:28484016-28492063	0	-	28484016	28491759	789624	7	102,144,73,86,79,122,44,	0,2330,2561,3439,7465,7697,8003,
#Partially deleted in new
chr16	28484075	28492065	chr16:28484075-28492065	0	-	28486482	28491759	789624	9	43,144,86,80,72,97,79,122,46,	0,2271,3380,3586,4515,5214,7406,7638,7944,
#Partially deleted in new
chr16	28486349	28491811	chr16:28486349-28491811	0	-	28486634	28489349	789624	5	141,73,86,97,98,	0,228,1106,2940,5364,
#Partially deleted in new
chr16	28486577	28492042	chr16:28486577-28492042	0	-	28486577	28491759	789624	6	73,86,80,72,97,561,	0,878,1084,2013,2712,4904,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	28491820	28495567	chr16:28491820-28495567	0	-	28491820	28491820	8553170	4	15,266,252,442,	0,199,1674,3305,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	28491830	28495534	chr16:28491830-28495534	0	-	28491830	28491830	8553170	4	5,196,170,194,	0,189,1664,3510,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	28492104	28495575	chr16:28492104-28495575	0	-	28492104	28492104	8553170	3	111,198,235,	0,1390,3236,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	28492136	28493986	chr16:28492136-28493986	0	-	28492136	28492136	8553170	2	59,492,	0,1358,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	28492189	28495545	chr16:28492189-28495545	0	-	28492189	28492189	8553170	3	26,170,420,	0,1305,2936,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	28493553	28495556	chr16:28493553-28495556	0	-	28493553	28493553	8553170	2	139,431,	0,1572,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	28494648	28498970	chr16:28494648-28498970	1	+	28494681	28498505	789624	5	90,991,1880,269,535,	0,450,1468,3432,3787,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	28494648	28498970	chr16:28494648-28498970	3	+	28494681	28498505	789624	4	90,2898,269,535,	0,450,3432,3787,
#Partially deleted in new
chr16	28499361	28506834	chr16:28499361-28506834	3	-	28499650	28506811	789624	5	559,159,99,173,54,	0,2614,4333,4516,7419,
#Partially deleted in new
chr16	28501973	28512051	chr16:28501973-28512051	0	-	28501973	28502044	789624	4	161,99,173,224,	0,1721,1904,9854,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	28532707	28539174	chr16:28532707-28539174	3	-	28538018	28538907	789624	3	4962,150,379,	0,5298,6088,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	28537506	28538951	chr16:28537506-28538951	0	-	28538634	28538907	789624	4	163,150,129,156,	0,499,1019,1289,
#Partially deleted in new
chr16	28537536	28539008	chr16:28537536-28539008	1	-	28538018	28538907	789624	3	133,204,213,	0,469,1259,
#Deleted in new
chr16	28548330	28548658	chr16:28548330-28548658	7	-	28548330	28548330	16724991	1	328,	0,
#Partially deleted in new
chr16	28553708	28554140	chr16:28553708-28554140	3	-	28553708	28553708	8553170	1	432,	0,
#Partially deleted in new
chr16	28553914	28585403	chr16:28553914-28585403	0	+	28553914	28553914	8553170	3	183,90,491,	0,27140,30998,
#Partially deleted in new
chr16	28553919	28589420	chr16:28553919-28589420	0	+	28553919	28553919	8553170	5	178,90,76,73,321,	0,27135,30993,31728,35180,
#Partially deleted in new
chr16	28553925	28591790	chr16:28553925-28591790	3	+	28581069	28591706	0	10	172,90,76,73,65,130,147,36,163,201,	0,27129,30987,31722,35174,36170,36370,36705,36847,37664,
#Deleted in new
chr16	28590116	28591790	chr16:28590116-28591790	0	+	28590116	28590116	8553170	4	326,36,163,201,	0,514,656,1473,
#Deleted in new
chr16	28590384	28591788	chr16:28590384-28591788	0	+	28590384	28591706	789624	4	58,7,90,199,	0,246,461,1205,
#Deleted in new
chr16	28590599	28591788	chr16:28590599-28591788	0	+	28590599	28590599	8553170	2	336,199,	0,990,
#Partially deleted in new
chr16	28591942	28597109	chr16:28591942-28597109	3	-	28592027	28595930	0	8	198,181,95,127,98,126,152,113,	0,320,1309,1499,3424,3607,3840,5054,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	28591942	28597047	chr16:28591942-28597047	1	-	28592027	28595930	789624	4	198,219,309,1265,	0,320,3424,3840,
#Partially deleted in new
chr16	28591942	28596374	chr16:28591942-28596374	0	-	28593264	28595930	789624	6	198,219,95,127,309,592,	0,320,1309,1499,3424,3840,
#Partially deleted in new
chr16	28591944	28596480	chr16:28591944-28596480	1	-	28592027	28595930	0	8	196,181,95,127,98,126,152,347,	0,318,1307,1497,3422,3605,3838,4189,
#Partially deleted in new
chr16	28593269	28596295	chr16:28593269-28596295	0	-	28593269	28595930	789624	6	77,127,98,126,183,162,	0,172,2097,2280,2513,2864,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	28599240	28601881	chr16:28599240-28601881	7	-	28599240	28599240	16724991	4	76,132,366,166,	0,247,1364,2475,
#Partially deleted in new
chr16	28602339	28604519	chr16:28602339-28604519	7	+	28602339	28602339	16724991	3	40,154,206,	0,1164,1974,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	28605195	28608920	chr16:28605195-28608920	1	-	28605820	28608855	0	7	738,181,95,127,98,126,213,	0,860,1565,1755,3095,3282,3512,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	28605581	28623586	chr16:28605581-28623586	1	-	28605820	28623197	0	6	352,181,95,127,71,456,	0,474,1179,1369,14481,17549,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	28605586	28623252	chr16:28605586-28623252	0	-	28610158	28623197	789624	11	347,181,95,127,98,126,152,73,261,71,122,	0,469,1174,1364,2704,2891,3121,3776,4344,14476,17544,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	28605590	28614279	chr16:28605590-28614279	0	-	28605590	28605590	8553170	4	343,181,95,7329,	0,465,1170,1360,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	28605591	28623553	chr16:28605591-28623553	0	-	28610158	28623197	789624	10	342,181,95,127,98,126,152,261,71,423,	0,464,1169,1359,2699,2886,3116,4339,14471,17539,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	28605596	28609328	chr16:28605596-28609328	1	-	28605820	28608855	0	8	337,181,95,127,98,126,152,270,	0,459,1164,1354,2694,2881,3111,3462,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	28605596	28623553	chr16:28605596-28623553	3	-	28605820	28608855	0	10	337,181,95,127,98,126,152,261,71,423,	0,459,1164,1354,2694,2881,3111,4334,14466,17534,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	28605627	28610007	chr16:28605627-28610007	1	-	28605820	28608855	0	8	306,181,95,127,98,126,152,77,	0,428,1133,1323,2663,2850,3080,4303,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	28605627	28623625	chr16:28605627-28623625	0	-	28608739	28623197	789624	9	306,181,95,127,98,126,152,71,495,	0,428,1133,1323,2663,2850,3080,14435,17503,
#Partially deleted in new
chr16	28605864	28609990	chr16:28605864-28609990	0	-	28605864	28608855	789624	8	69,181,95,127,98,126,183,60,	0,191,896,1086,2426,2613,2843,4066,
#Partially deleted in new
chr16	28606195	28610032	chr16:28606195-28610032	0	-	28606195	28608855	789624	6	41,95,127,98,152,102,	0,565,755,2095,2512,3735,
#Partially deleted in new
chr16	28612130	28614884	chr16:28612130-28614884	7	-	28612130	28612130	16724991	6	24,87,128,180,52,162,	0,100,355,1484,1786,2592,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	28637653	28658682	chr16:28637653-28658682	3	+	28638360	28658630	789624	7	827,183,100,196,61,36,655,	0,10481,14303,14515,18809,18979,20374,
#Partially deleted in new
chr16	28652233	28656948	chr16:28652233-28656948	0	+	28652233	28656875	789624	3	131,61,316,	0,4229,4399,
#Partially deleted in new
chr16	28659695	28740781	chr16:28659695-28740781	7	-	28659695	28659695	16724991	3	107,151,103,	0,3541,80983,
#Partially deleted in new
chr16	28688557	28735598	chr16:28688557-28735598	3	+	28711686	28735513	0	21	271,131,66,190,126,55,110,128,160,104,142,126,94,191,225,364,160,66,88,163,168,	0,23099,25143,25351,25763,26078,26261,26749,34606,34890,35764,36100,36361,38047,38463,43271,45962,46220,46374,46615,46873,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	28700293	28701540	chr16:28700293-28701540	7	-	28700293	28700293	16724991	2	607,352,	0,895,
#Partially deleted in new
chr16	28711362	28735730	chr16:28711362-28735730	1	+	28711686	28735513	0	21	156,131,66,190,126,55,110,128,160,104,142,126,94,191,225,364,160,66,88,163,300,	0,294,2338,2546,2958,3273,3456,3944,11801,12085,12959,13295,13556,15242,15658,20466,23157,23415,23569,23810,24068,
#Partially deleted in new
chr16	28711416	28735727	chr16:28711416-28735727	1	+	28711686	28735513	0	21	151,131,66,190,126,55,110,128,160,104,142,126,94,191,225,364,160,66,88,163,297,	0,240,2284,2492,2904,3219,3402,3890,11747,12031,12905,13241,13502,15188,15604,20412,23103,23361,23515,23756,24014,
#Partially deleted in new
chr16	28711462	28714409	chr16:28711462-28714409	0	+	28711686	28714409	789624	5	105,131,66,190,89,	0,194,2238,2446,2858,
#Partially deleted in new
chr16	28711473	28735596	chr16:28711473-28735596	1	+	28711686	28735513	0	21	45,131,66,190,96,55,110,128,160,104,142,126,94,191,225,364,160,66,88,163,166,	0,183,2227,2435,2877,3162,3345,3833,11690,11974,12848,13184,13445,15131,15547,20355,23046,23304,23458,23699,23957,
#Partially deleted in new
chr16	28711526	28735597	chr16:28711526-28735597	1	+	28711686	28735513	0	20	261,66,190,126,55,110,128,160,104,142,126,94,191,225,364,160,66,88,163,167,	0,2174,2382,2794,3109,3292,3780,11637,11921,12795,13131,13392,15078,15494,20302,22993,23251,23405,23646,23904,
#Partially deleted in new
chr16	28712036	28714412	chr16:28712036-28714412	0	+	28713951	28714412	789624	4	168,66,190,92,	0,1664,1872,2284,
#Deleted in new
chr16	28713258	28714888	chr16:28713258-28714888	0	+	28713951	28714888	789624	6	65,66,190,126,55,70,	0,442,650,1062,1377,1560,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	28720498	28723217	chr16:28720498-28723217	0	+	28720498	28720498	8553170	2	534,54,	0,2665,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	28721254	28735595	chr16:28721254-28735595	0	+	28721254	28721254	8553170	13	2069,104,142,126,94,191,225,364,160,66,88,163,165,	0,2193,3067,3403,3664,5350,5766,10574,13265,13523,13677,13918,14176,
#Deleted in new
chr16	28724251	28724321	chr16:28724251-28724321	3	+	28724251	28724251	5263520	1	70,	0,
#Partially deleted in new
chr16	28726261	28727072	chr16:28726261-28727072	0	+	28726261	28726261	8553170	2	534,52,	0,759,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	28726698	28727543	chr16:28726698-28727543	0	+	28726698	28726698	8553170	2	97,523,	0,322,
#Partially deleted in new
chr16	28732172	28735445	chr16:28732172-28735445	0	+	28732172	28732172	8553170	5	20,324,88,163,15,	0,2347,2759,3000,3258,
#Partially deleted in new
chr16	28734918	28735590	chr16:28734918-28735590	0	+	28734918	28734918	8553170	3	101,163,160,	0,254,512,
#Deleted in new
chr16	28749958	28750595	chr16:28749958-28750595	7	-	28749958	28749958	16724991	1	637,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	28751786	28772807	chr16:28751786-28772807	1	+	28766132	28772755	789624	7	806,183,100,196,61,36,655,	0,10464,14295,14507,18801,18971,20366,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	28751786	28772807	chr16:28751786-28772807	3	+	28752567	28772755	789624	8	806,86,183,100,196,61,36,655,	0,6211,10464,14295,14507,18801,18971,20366,
#Partially deleted in new
chr16	28773823	28777534	chr16:28773823-28777534	7	-	28773823	28773823	16724991	2	104,151,	0,3560,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	28802742	28817828	chr16:28802742-28817828	3	+	28802742	28802742	8553170	2	270,1693,	0,13393,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	28813979	28814673	chr16:28813979-28814673	7	-	28813979	28813979	16724991	1	694,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	28820569	28822033	chr16:28820569-28822033	3	-	28820569	28820569	8553170	2	189,351,	0,1113,
#Deleted in new
chr16	28822430	28823969	chr16:28822430-28823969	3	-	28822430	28822430	8553170	1	1539,	0,
#Partially deleted in new
chr16	28823034	28837237	chr16:28823034-28837237	0	+	28823034	28823034	8553170	21	524,37,57,72,151,125,92,201,176,111,195,72,71,296,70,147,73,188,130,481,1305,	0,2331,2589,2735,3205,3827,6366,6823,7580,7927,9170,9461,9782,10024,10404,11030,11308,11471,12023,12243,12898,
#Partially deleted in new
chr16	28823047	28837237	chr16:28823047-28837237	1	+	28823259	28836777	789624	23	511,37,57,72,151,125,92,201,176,111,195,72,71,296,70,147,73,188,130,122,210,190,510,	0,2318,2576,2722,3192,3814,6353,6810,7567,7914,9157,9448,9769,10011,10391,11017,11295,11458,12010,12230,12501,12885,13680,
#Partially deleted in new
chr16	28823092	28837232	chr16:28823092-28837232	1	+	28823259	28836800	789624	23	466,37,57,72,151,125,92,201,176,111,195,72,71,296,70,147,73,188,130,122,210,244,482,	0,2273,2531,2677,3147,3769,6308,6765,7522,7869,9112,9403,9724,9966,10346,10972,11250,11413,11965,12185,12456,12840,13658,
#Partially deleted in new
chr16	28823092	28837237	chr16:28823092-28837237	1	+	28823259	28836265	789624	22	466,37,57,72,151,125,92,201,176,111,195,72,71,296,70,147,73,188,130,122,210,1305,	0,2273,2531,2677,3147,3769,6308,6765,7522,7869,9112,9403,9724,9966,10346,10972,11250,11413,11965,12185,12456,12840,
#Partially deleted in new
chr16	28823092	28837237	chr16:28823092-28837237	1	+	28823259	28836800	789624	23	466,37,57,72,151,125,92,201,176,111,195,72,71,296,70,147,73,188,130,122,210,190,487,	0,2273,2531,2677,3147,3769,6308,6765,7522,7869,9112,9403,9724,9966,10346,10972,11250,11413,11965,12185,12456,12840,13658,
#Partially deleted in new
chr16	28823092	28837237	chr16:28823092-28837237	3	+	28823259	28836480	789624	24	466,37,57,72,151,125,92,201,176,111,195,72,71,296,70,147,73,188,130,122,210,244,165,510,	0,2273,2531,2677,3147,3769,6308,6765,7522,7869,9112,9403,9724,9966,10346,10972,11250,11413,11965,12185,12456,12840,13233,13635,
#Partially deleted in new
chr16	28823094	28836919	chr16:28823094-28836919	1	+	28823259	28836777	789624	23	464,37,57,72,151,125,92,201,176,111,213,72,71,296,70,147,73,188,130,122,210,244,192,	0,2271,2529,2675,3145,3767,6306,6763,7520,7867,9092,9401,9722,9964,10344,10970,11248,11411,11963,12183,12454,12838,13633,
#Partially deleted in new
chr16	28823251	28837215	chr16:28823251-28837215	1	+	28823259	28836777	789624	23	307,37,57,72,151,125,92,201,176,111,195,72,71,296,70,147,73,188,130,122,210,244,488,	0,2114,2372,2518,2988,3610,6149,6606,7363,7710,8953,9244,9565,9807,10187,10813,11091,11254,11806,12026,12297,12681,13476,
#Partially deleted in new
chr16	28823481	28826605	chr16:28823481-28826605	0	+	28823481	28823481	8553170	5	77,37,57,72,366,	0,1884,2142,2288,2758,
#Partially deleted in new
chr16	28824137	28830768	chr16:28824137-28830768	0	+	28824423	28830768	789624	9	405,37,57,72,151,125,92,201,154,	0,1228,1486,1632,2102,2724,5263,5720,6477,
#Partially deleted in new
chr16	28824450	28826885	chr16:28824450-28826885	0	+	28825653	28826885	789624	6	211,37,57,72,151,24,	0,915,1173,1319,1789,2411,
#Partially deleted in new
chr16	28825365	28826184	chr16:28825365-28826184	0	+	28825365	28825365	8553170	3	37,57,415,	0,258,404,
#Partially deleted in new
chr16	28825370	28825920	chr16:28825370-28825920	0	+	28825370	28825370	8553170	2	32,297,	0,253,
#Partially deleted in new
chr16	28825769	28837237	chr16:28825769-28837237	0	+	28825769	28832498	789624	15	72,151,62,190,176,72,296,70,147,73,188,130,122,210,1305,	0,470,1092,4099,4845,6726,7289,7669,8295,8573,8736,9288,9508,9779,10163,
#Partially deleted in new
chr16	28829400	28832348	chr16:28829400-28832348	0	+	28829400	28829400	8553170	5	92,201,176,88,144,	0,457,1214,1584,2804,
#Deleted in new
chr16	28829777	28830936	chr16:28829777-28830936	0	+	28829777	28829777	8553170	2	281,322,	0,837,
#Partially deleted in new
chr16	28830611	28837200	chr16:28830611-28837200	3	-	28830611	28830611	8553170	2	26,269,	0,6320,
#Deleted in new
chr16	28833195	28835187	chr16:28833195-28835187	0	+	28833195	28833195	8553170	6	159,70,147,73,171,130,	0,243,869,1147,1327,1862,
#Deleted in new
chr16	28833855	28835316	chr16:28833855-28835316	0	+	28833855	28833855	8553170	5	356,73,188,130,39,	0,487,650,1202,1422,
#Deleted in new
chr16	28834064	28837237	chr16:28834064-28837237	0	+	28834064	28836265	789624	8	147,73,188,130,122,210,553,510,	0,278,441,993,1213,1484,1868,2663,
#Deleted in new
chr16	28834064	28837221	chr16:28834064-28837221	0	+	28834064	28836265	789624	7	147,73,188,130,122,213,1289,	0,278,441,993,1213,1481,1868,
#Deleted in new
chr16	28834328	28835425	chr16:28834328-28835425	0	+	28834328	28834328	8553170	3	87,188,368,	0,177,729,
#Deleted in new
chr16	28834851	28835430	chr16:28834851-28835430	0	+	28834851	28834851	8553170	2	336,153,	0,426,
#Deleted in new
chr16	28835098	28836076	chr16:28835098-28836076	0	+	28835098	28836076	789624	4	89,122,204,144,	0,179,456,834,
#Deleted in new
chr16	28835594	28836929	chr16:28835594-28836929	0	+	28835594	28836480	789624	4	164,190,37,80,	0,338,854,1255,
#Deleted in new
chr16	28835668	28837237	chr16:28835668-28837237	0	+	28835668	28836800	789624	3	90,190,490,	0,264,1079,
#Deleted in new
chr16	28836445	28837232	chr16:28836445-28837232	0	+	28836445	28836480	789624	2	40,485,	0,302,
#Deleted in new
chr16	28842410	28846408	chr16:28842410-28846408	3	-	28842974	28846269	789624	10	738,120,152,105,133,165,105,167,195,191,	0,1325,1539,1819,2008,2287,2540,2903,3501,3807,
#Deleted in new
chr16	28842837	28844332	chr16:28842837-28844332	0	-	28842837	28842837	8553170	3	311,120,383,	0,898,1112,
#Deleted in new
chr16	28843918	28844007	chr16:28843918-28844007	3	-	28843918	28843918	5263520	1	89,	0,
#Deleted in new
chr16	28843951	28846330	chr16:28843951-28846330	0	-	28844996	28846269	789624	7	150,105,133,165,105,195,113,	0,278,467,746,999,1960,2266,
#Deleted in new
chr16	28844625	28845007	chr16:28844625-28845007	0	-	28844625	28844625	8553170	2	237,57,	0,325,
#Partially deleted in new
chr16	28846599	28866284	chr16:28846599-28866284	0	+	28866094	28866284	789624	3	228,87,273,	0,17068,19412,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	28846642	28869289	chr16:28846642-28869289	0	+	28869235	28869289	789624	4	185,130,87,82,	0,14975,17025,22565,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	28846688	28874205	chr16:28846688-28874205	1	+	28866094	28873820	0	11	139,130,87,1022,102,92,176,204,212,172,759,	0,14929,16979,19323,20642,22317,22519,25091,25501,25845,26758,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	28862165	28863340	chr16:28862165-28863340	3	-	28862165	28862165	8553170	2	365,179,	0,996,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	28862803	28874201	chr16:28862803-28874201	3	+	28866094	28873465	0	9	4230,102,92,176,204,212,172,100,755,	0,4527,6202,6404,8976,9386,9730,10366,10643,
#Partially deleted in new
chr16	28863558	28873627	chr16:28863558-28873627	1	+	28863745	28873448	789624	9	196,102,92,176,204,212,225,100,181,	0,3772,5447,5649,8221,8631,8975,9611,9888,
#Partially deleted in new
chr16	28863756	28874212	chr16:28863756-28874212	1	+	28866094	28873820	0	9	189,1022,102,92,176,204,212,172,766,	0,2255,3574,5249,5451,8023,8433,8777,9690,
#Partially deleted in new
chr16	28863804	28874205	chr16:28863804-28874205	1	+	28866094	28873448	0	10	141,1022,102,92,176,204,212,225,100,759,	0,2207,3526,5201,5403,7975,8385,8729,9365,9642,
#Partially deleted in new
chr16	28863805	28873823	chr16:28863805-28873823	1	+	28867399	28873465	789624	9	140,59,92,176,204,212,172,100,377,	0,3568,5200,5402,7974,8384,8728,9364,9641,
#Partially deleted in new
chr16	28863877	28873755	chr16:28863877-28873755	0	+	28863877	28863877	8553170	3	68,342,309,	0,9050,9569,
#Partially deleted in new
chr16	28863974	28873607	chr16:28863974-28873607	1	+	28866094	28873465	0	10	288,1022,102,92,176,204,212,172,100,161,	0,2037,3356,5031,5233,7805,8215,8559,9195,9472,
#Partially deleted in new
chr16	28866634	28871955	chr16:28866634-28871955	0	+	28866634	28871955	789624	5	43,59,92,176,176,	0,739,2371,2573,5145,
#Partially deleted in new
chr16	28867153	28871914	chr16:28867153-28871914	0	+	28867399	28871914	789624	4	279,92,107,135,	0,1852,2123,4626,
#Partially deleted in new
chr16	28869093	28872390	chr16:28869093-28872390	0	+	28869093	28869093	8553170	3	4,176,611,	0,114,2686,
#Deleted in new
chr16	28872252	28873893	chr16:28872252-28873893	0	+	28872252	28873674	789624	3	149,225,447,	0,281,1194,
#Deleted in new
chr16	28872339	28872813	chr16:28872339-28872813	0	+	28872339	28872813	789624	2	62,280,	0,194,
#Partially deleted in new
chr16	28878404	28904464	chr16:28878404-28904464	1	+	28878671	28904205	789624	22	385,18,83,105,139,81,86,298,167,89,103,132,126,219,336,221,203,86,134,118,118,285,	0,694,1096,2510,4046,6170,8784,9020,10382,15750,16100,16417,19595,19828,22176,23458,23779,24175,24373,24625,24918,25775,
#Partially deleted in new
chr16	28878487	28904509	chr16:28878487-28904509	3	+	28878671	28903704	789624	23	302,18,83,105,139,81,86,298,167,89,103,132,126,219,336,221,203,86,134,118,118,42,330,	0,611,1013,2427,3963,6087,8701,8937,10299,15667,16017,16334,19512,19745,22093,23375,23696,24092,24290,24542,24835,25212,25692,
#Partially deleted in new
chr16	28878860	28882551	chr16:28878860-28882551	0	+	28879064	28882551	789624	4	256,83,105,101,	0,640,2054,3590,
#Deleted in new
chr16	28878956	28879895	chr16:28878956-28879895	3	-	28878956	28878956	789624	2	151,407,	0,532,
#Deleted in new
chr16	28878956	28879920	chr16:28878956-28879920	0	-	28878956	28878956	789624	2	151,379,	0,585,
#Partially deleted in new
chr16	28879242	28882580	chr16:28879242-28882580	0	+	28882501	28882580	789624	3	341,105,130,	0,1672,3208,
#Partially deleted in new
chr16	28880052	28904464	chr16:28880052-28904464	1	+	28882501	28903704	789624	21	42,105,139,81,86,298,167,89,103,132,126,219,336,221,203,86,134,118,118,42,285,	0,862,2398,4522,7136,7372,8734,14102,14452,14769,17947,18180,20528,21810,22131,22527,22725,22977,23270,23647,24127,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	28881479	28881607	chr16:28881479-28881607	3	-	28881479	28881479	8553170	1	128,	0,
#Partially deleted in new
chr16	28887662	28900618	chr16:28887662-28900618	0	+	28887662	28894891	789624	7	60,167,89,132,126,219,38,	0,1124,6492,7159,10337,10570,12918,
#Partially deleted in new
chr16	28888896	28894219	chr16:28888896-28894219	0	+	28888896	28892383	789624	3	57,345,65,	0,3418,5258,
#Partially deleted in new
chr16	28888896	28894219	chr16:28888896-28894219	0	+	28888896	28888896	8553170	3	57,117,65,	0,3418,5258,
#Deleted in new
chr16	28903372	28903826	chr16:28903372-28903826	0	+	28903372	28903704	789624	2	68,127,	0,327,
#Partially deleted in new
chr16	28904420	28925214	chr16:28904420-28925214	1	-	28904942	28925163	789624	11	624,117,56,178,156,99,351,111,158,213,112,	0,976,1283,1598,4188,6467,9815,10251,15365,19982,20682,
#Partially deleted in new
chr16	28904420	28925752	chr16:28904420-28925752	3	-	28904942	28925163	789624	13	624,117,56,12,178,156,99,96,351,111,158,213,650,	0,976,1283,1446,1598,4188,6467,6663,9815,10251,15365,19982,20682,
#Partially deleted in new
chr16	28904827	28925196	chr16:28904827-28925196	1	-	28904942	28925163	789624	12	217,117,56,12,178,156,99,96,351,111,158,94,	0,569,876,1039,1191,3781,6060,6256,9408,9844,14958,20275,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	28910286	28925684	chr16:28910286-28925684	0	-	28910286	28910286	8553170	7	700,96,351,111,158,213,582,	0,797,3949,4385,9499,14116,14816,
#Partially deleted in new
chr16	28914235	28924827	chr16:28914235-28924827	0	-	28914235	28924517	789624	4	351,111,158,425,	0,436,5550,10167,
#Partially deleted in new
chr16	28914258	28924937	chr16:28914258-28924937	0	-	28914258	28924937	789624	5	328,111,158,213,31,	0,413,5527,10144,10648,
#Partially deleted in new
chr16	28914489	28924200	chr16:28914489-28924200	0	-	28914489	28919794	789624	4	97,111,158,172,	0,182,5296,9539,
#Partially deleted in new
chr16	28914573	28936526	chr16:28914573-28936526	0	-	28914573	28919794	789624	4	13,111,158,263,	0,98,5212,21690,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	28916175	28925214	chr16:28916175-28925214	0	-	28916175	28916175	8553170	4	110,158,213,112,	0,3610,8227,8927,
#Partially deleted in new
chr16	28917822	28925177	chr16:28917822-28925177	0	-	28917822	28917822	8553170	4	107,158,213,75,	0,1963,6580,7280,
#Partially deleted in new
chr16	28917836	28924711	chr16:28917836-28924711	0	-	28917836	28917836	8553170	3	93,158,309,	0,1949,6566,
#Partially deleted in new
chr16	28919687	28925216	chr16:28919687-28925216	0	-	28919687	28919687	8553170	3	256,213,114,	0,4715,5415,
#Partially deleted in new
chr16	28919694	28924710	chr16:28919694-28924710	0	-	28919694	28919694	8553170	2	249,308,	0,4708,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	28919785	28924682	chr16:28919785-28924682	0	-	28921184	28924517	789624	3	158,151,280,	0,1277,4617,
#Partially deleted in new
chr16	28931938	28939346	chr16:28931938-28939346	1	+	28932000	28938963	0	15	150,267,204,276,111,49,89,114,105,69,57,57,96,107,206,	0,407,972,1295,3505,4214,4573,5084,5332,5516,5685,5830,6734,6933,7202,
#Partially deleted in new
chr16	28931956	28939342	chr16:28931956-28939342	3	+	28932000	28938963	0	15	132,267,204,276,111,49,89,114,105,69,57,57,93,107,202,	0,389,954,1277,3487,4196,4555,5066,5314,5498,5667,5812,6719,6915,7184,
#Partially deleted in new
chr16	28931964	28939342	chr16:28931964-28939342	0	+	28931964	28931964	8553170	13	124,769,276,111,49,89,114,105,226,57,93,107,202,	0,381,1269,3479,4188,4547,5058,5306,5490,5804,6711,6907,7176,
#Partially deleted in new
chr16	28931967	28938963	chr16:28931967-28938963	1	+	28932000	28938963	0	14	121,267,204,276,111,49,89,114,105,69,57,57,96,92,	0,378,943,1266,3476,4185,4544,5055,5303,5487,5656,5801,6705,6904,
#Partially deleted in new
chr16	28932932	28933641	chr16:28932932-28933641	0	+	28932932	28932932	8553170	2	182,408,	0,301,
#Partially deleted in new
chr16	28936798	28939218	chr16:28936798-28939218	0	+	28936798	28936798	8553170	7	338,105,69,57,93,107,78,	0,472,656,825,1877,2073,2342,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	28950806	28965698	chr16:28950806-28965698	1	+	28952195	28963863	789624	5	28,73,145,110,1994,	0,1325,7910,8184,12898,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	28950936	28967097	chr16:28950936-28967097	3	+	28951011	28963863	0	8	462,73,118,81,187,145,110,3393,	0,1195,3628,5041,5214,7780,8054,12768,
#Deleted in new
chr16	28950987	28952643	chr16:28950987-28952643	0	+	28950987	28950987	8553170	2	64,512,	0,1144,
#Partially deleted in new
chr16	28951006	28959018	chr16:28951006-28959018	0	+	28951006	28951006	8553170	4	392,73,145,28,	0,1125,7710,7984,
#Deleted in new
chr16	28951006	28952562	chr16:28951006-28952562	0	+	28951006	28951006	8553170	2	392,431,	0,1125,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	28954605	28956712	chr16:28954605-28956712	0	+	28954605	28954605	8553170	3	77,81,562,	0,1372,1545,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	28956686	28966883	chr16:28956686-28966883	3	-	28956686	28956686	8553170	2	76,468,	0,9729,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	28956737	28957837	chr16:28956737-28957837	1	-	28956737	28956737	8553170	2	337,236,	0,864,
#Partially deleted in new
chr16	28958389	28964279	chr16:28958389-28964279	1	+	28958746	28963863	0	3	472,110,575,	0,601,5315,
#Partially deleted in new
chr16	28958582	28958661	chr16:28958582-28958661	3	+	28958582	28958582	5263520	1	79,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	28973961	28978824	chr16:28973961-28978824	3	-	28973961	28973961	8553170	2	1127,351,	0,4512,
#Partially deleted in new
chr16	28974220	28979244	chr16:28974220-28979244	0	+	28975151	28979244	789624	5	244,292,66,137,90,	0,880,1271,3687,4934,
#Partially deleted in new
chr16	28974320	28979455	chr16:28974320-28979455	0	+	28975370	28979455	789624	6	144,209,66,137,152,51,	0,863,1171,3587,4834,5084,
#Partially deleted in new
chr16	28974771	28984548	chr16:28974771-28984548	1	+	28974779	28984299	789624	13	92,292,66,137,152,67,146,156,190,66,99,172,344,	0,329,720,3136,4383,4633,6698,7129,7584,8085,8420,9014,9433,
#Partially deleted in new
chr16	28974774	28984543	chr16:28974774-28984543	3	+	28975151	28984299	789624	12	618,66,137,152,67,146,156,190,66,99,172,339,	0,717,3133,4380,4630,6695,7126,7581,8082,8417,9011,9430,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	28974777	28980687	chr16:28974777-28980687	0	+	28974777	28974777	8553170	5	615,66,137,152,1283,	0,714,3130,4377,4627,
#Partially deleted in new
chr16	28974793	28984543	chr16:28974793-28984543	1	+	28975370	28984299	789624	13	307,205,66,137,152,67,146,156,190,66,99,172,339,	0,394,698,3114,4361,4611,6676,7107,7562,8063,8398,8992,9411,
#Partially deleted in new
chr16	28974800	28984544	chr16:28974800-28984544	1	+	28975151	28984299	789624	11	592,66,137,152,67,146,190,66,99,172,340,	0,691,3107,4354,4604,6669,7555,8056,8391,8985,9404,
#Partially deleted in new
chr16	28974803	28990775	chr16:28974803-28990775	3	+	28974803	28974803	8553170	19	297,209,66,137,152,67,1076,66,99,172,1313,504,65,175,95,63,66,87,587,	0,380,688,3104,4351,4601,6666,8053,8388,8982,9401,10909,11578,11736,11995,14723,14970,15129,15385,
#Partially deleted in new
chr16	28974812	28984543	chr16:28974812-28984543	1	+	28975151	28984299	789624	10	580,137,152,67,146,190,66,99,172,339,	0,3095,4342,4592,6657,7543,8044,8379,8973,9392,
#Partially deleted in new
chr16	28975184	28984517	chr16:28975184-28984517	0	+	28975184	28984517	789624	11	208,66,137,152,67,161,156,190,66,99,313,	0,307,2723,3970,4220,6270,6716,7171,7672,8007,9020,
#Partially deleted in new
chr16	28975197	28984058	chr16:28975197-28984058	0	+	28975197	28983992	789624	6	195,66,137,152,67,273,	0,294,2710,3957,4207,8588,
#Partially deleted in new
chr16	28975501	28982375	chr16:28975501-28982375	0	+	28975501	28975501	8553170	5	56,152,67,146,20,	0,3653,3903,5968,6854,
#Partially deleted in new
chr16	28977937	28984540	chr16:28977937-28984540	0	+	28977937	28984299	789624	5	107,66,99,172,336,	0,4919,5254,5848,6267,
#Partially deleted in new
chr16	28984825	28990783	chr16:28984825-28990783	1	+	28984861	28990012	789624	13	102,142,28,35,82,65,30,58,95,63,66,87,595,	0,550,887,1028,1309,1556,1714,1831,1973,4701,4948,5107,5363,
#Partially deleted in new
chr16	28985048	28986302	chr16:28985048-28986302	0	+	28985048	28985048	8553170	3	469,28,449,	0,664,805,
#Partially deleted in new
chr16	28985053	28990019	chr16:28985053-28990019	1	+	28985417	28990012	789624	12	173,142,28,35,82,62,30,58,95,63,66,87,	0,322,659,800,1081,1331,1486,1603,1745,4473,4720,4879,
#Partially deleted in new
chr16	28985063	28986232	chr16:28985063-28986232	0	+	28985063	28985063	8553170	4	454,28,35,98,	0,649,790,1071,
#Partially deleted in new
chr16	28985065	28990783	chr16:28985065-28990783	1	+	28985417	28990012	789624	12	452,28,35,82,18,17,175,95,63,66,87,595,	0,647,788,1069,1316,1364,1474,1733,4461,4708,4867,5123,
#Partially deleted in new
chr16	28985065	28986843	chr16:28985065-28986843	0	+	28985065	28985065	8553170	7	452,28,35,62,30,58,45,	0,647,788,1319,1474,1591,1733,
#Partially deleted in new
chr16	28985065	28986367	chr16:28985065-28986367	1	+	28985417	28986367	789624	5	452,28,35,82,13,	0,647,788,1069,1289,
#Partially deleted in new
chr16	28985095	28990773	chr16:28985095-28990773	1	+	28985417	28990012	789624	12	422,28,35,82,65,30,58,95,63,66,87,585,	0,617,758,1039,1286,1444,1561,1703,4431,4678,4837,5093,
#Partially deleted in new
chr16	28985122	28990449	chr16:28985122-28990449	1	+	28985417	28990012	789624	12	395,28,35,82,62,30,58,95,63,66,87,261,	0,590,731,1012,1262,1417,1534,1676,4404,4651,4810,5066,
#Partially deleted in new
chr16	28985339	28990773	chr16:28985339-28990773	3	+	28985417	28990012	789624	11	178,28,35,82,65,175,95,63,66,87,585,	0,373,514,795,1042,1200,1459,4187,4434,4593,4849,
#Partially deleted in new
chr16	28985417	28990012	chr16:28985417-28990012	0	+	28985417	28986367	789624	10	100,28,35,82,92,175,95,63,66,80,	0,295,436,717,937,1122,1381,4109,4356,4515,
#Partially deleted in new
chr16	28985417	28990012	chr16:28985417-28990012	1	+	28985417	28990012	789624	10	100,28,35,82,62,175,95,63,66,80,	0,295,436,717,967,1122,1381,4109,4356,4515,
#Partially deleted in new
chr16	28985841	28990296	chr16:28985841-28990296	0	+	28985841	28985841	8553170	10	47,82,65,30,58,95,63,66,87,108,	0,293,540,698,815,957,3685,3932,4091,4347,
#Partially deleted in new
chr16	28986098	28986697	chr16:28986098-28986697	0	+	28986098	28986098	8553170	3	348,30,41,	0,441,558,
#Partially deleted in new
chr16	28986211	28990513	chr16:28986211-28990513	0	+	28986211	28990307	789624	8	5,65,30,58,95,63,66,325,	0,170,328,445,587,3315,3562,3977,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	28987565	28990454	chr16:28987565-28990454	0	+	28987565	28987565	8553170	4	2024,66,87,266,	0,2208,2367,2623,
#Partially deleted in new
chr16	28989139	28990778	chr16:28989139-28990778	3	-	28989139	28989139	8553170	2	86,368,	0,1271,
#Partially deleted in new
chr16	28989576	28990455	chr16:28989576-28990455	0	+	28989576	28989576	8553170	3	263,87,267,	0,356,612,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	29038654	29052726	chr16:29038654-29052726	7	+	29038654	29038654	16724991	8	66,183,100,145,108,61,36,655,	0,3547,7355,7618,10716,11847,12017,13417,
#Partially deleted in new
chr16	29053731	29107445	chr16:29053731-29107445	7	-	29053731	29053731	16724991	3	109,151,91,	0,3576,53623,
#Partially deleted in new
chr16	29074975	29116718	chr16:29074975-29116718	3	+	29074975	29074975	789624	16	146,106,57,90,130,60,62,99,93,131,124,109,153,88,92,592,	0,1680,2925,9467,9663,10241,11238,15764,19262,21155,22217,24129,27011,29099,38074,41151,
#Partially deleted in new
chr16	29075018	29116198	chr16:29075018-29116198	0	+	29075018	29075018	8553170	15	103,106,57,130,60,62,99,171,131,185,109,153,88,92,72,	0,1637,2882,9620,10198,11195,15721,19219,21112,22113,24086,26968,29056,38031,41108,
#Partially deleted in new
chr16	29075021	29104162	chr16:29075021-29104162	7	+	29075021	29075021	16724991	15	100,106,57,90,130,60,62,70,99,171,131,185,109,153,88,	0,1634,2879,9421,9617,10195,11192,12312,15718,19216,21109,22110,24083,26965,29053,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	29103656	29107711	chr16:29103656-29107711	4	-	29103656	29103656	16724991	2	1483,357,	0,3698,
#Deleted in new
chr16	29107656	29108108	chr16:29107656-29108108	5	-	29107656	29107656	16724991	2	41,80,	0,372,
#Partially deleted in new
chr16	29113049	29116326	chr16:29113049-29116326	5	+	29113049	29113049	16724991	2	92,200,	0,3077,
#Partially deleted in new
chr16	29114716	29217860	chr16:29114716-29217860	7	+	29114716	29114716	16724991	3	97,200,380,	0,1410,102764,
#Partially deleted in new
chr16	29139378	29331304	chr16:29139378-29331304	3	+	29139378	29139378	8553170	8	421,243,102,240,168,137,63,68,	0,112100,162908,172971,181549,186968,189183,191858,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	29139660	29216706	chr16:29139660-29216706	3	+	29139660	29139660	8553170	3	139,137,270,	0,73109,76776,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	29204632	29205855	chr16:29204632-29205855	3	+	29204632	29204632	8553170	1	1223,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	29212058	29214137	chr16:29212058-29214137	1	+	29212058	29212058	8553170	1	2079,	0,
#Deleted in new
chr16	29217169	29220031	chr16:29217169-29220031	3	-	29217169	29217169	8553170	2	495,1604,	0,1258,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	29225593	29226348	chr16:29225593-29226348	3	-	29225593	29225593	8553170	2	254,105,	0,650,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	29262272	29264479	chr16:29262272-29264479	3	-	29262272	29262272	8553170	2	411,150,	0,2057,
#Deleted in new
chr16	29272219	29272772	chr16:29272219-29272772	3	+	29272219	29272219	8553170	1	553,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	29291219	29372110	chr16:29291219-29372110	3	+	29291219	29291219	789624	11	657,102,240,168,137,63,182,71,246,376,2576,	0,11067,21130,29708,35127,37342,64567,68045,70030,73464,78315,
#Partially deleted in new
chr16	29312349	29331277	chr16:29312349-29331277	7	+	29312349	29312349	16724991	5	240,168,141,63,41,	0,8578,13997,16212,18887,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	29350745	29370272	chr16:29350745-29370272	7	+	29350745	29350745	16724991	6	244,182,71,246,376,738,	0,5041,8519,10504,13938,18789,
#Partially deleted in new
chr16	29351621	29361498	chr16:29351621-29361498	4	+	29351621	29351621	16724991	4	76,182,71,249,	0,4165,7643,9628,
#Partially deleted in new
chr16	29355786	29365059	chr16:29355786-29365059	5	+	29355786	29355786	16724991	4	182,71,246,376,	0,3478,5463,8897,
#Partially deleted in new
chr16	29359087	29365059	chr16:29359087-29365059	4	+	29359087	29359087	16724991	3	248,246,376,	0,2162,5596,
#Partially deleted in new
chr16	29380241	29380345	chr16:29380241-29380345	7	+	29380241	29380241	16724991	1	104,	0,
#Partially deleted in new
chr16	29381353	29404029	chr16:29381353-29404029	3	-	29381445	29403802	789624	8	2936,36,61,196,100,129,158,37,	0,4296,4441,8587,8895,12594,22329,22639,
#Partially deleted in new
chr16	29385033	29397696	chr16:29385033-29397696	1	-	29385442	29397642	789624	6	652,61,145,100,129,129,	0,761,4907,5215,8914,12534,
#Partially deleted in new
chr16	29425799	29447026	chr16:29425799-29447026	7	-	29425799	29425799	16724991	19	120,160,148,110,202,143,155,165,197,200,141,102,88,119,162,131,260,102,225,	0,848,1382,2502,5479,5829,8462,9713,10046,10630,11382,12142,12333,12880,13704,14015,17629,18598,21002,
#Partially deleted in new
chr16	29443055	29454562	chr16:29443055-29454562	0	-	29453632	29454451	789624	6	633,102,137,100,98,372,	0,1342,3746,10577,10960,11135,
#Partially deleted in new
chr16	29443229	29454347	chr16:29443229-29454347	2	-	29443418	29454347	789624	5	459,102,121,98,157,	0,1168,3572,10786,10961,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	29443248	29454356	chr16:29443248-29454356	1	-	29454011	29454356	789624	6	440,102,225,165,2005,166,	0,1149,3553,6863,8860,10942,
#Partially deleted in new
chr16	29443269	29454651	chr16:29443269-29454651	0	-	29447010	29454451	789624	5	419,102,225,98,461,	0,1128,3532,10746,10921,
#Deleted in new
chr16	29449190	29449625	chr16:29449190-29449625	7	+	29449190	29449190	16724991	2	47,105,	0,330,
#Deleted in new
chr16	29453592	29454964	chr16:29453592-29454964	3	-	29453632	29454451	789624	3	140,98,774,	0,423,598,
#Partially deleted in new
chr16	29454500	29458219	chr16:29454500-29458219	3	+	29454742	29458124	789624	6	430,52,342,128,88,125,	0,897,1043,3131,3427,3594,
#Partially deleted in new
chr16	29454544	29458189	chr16:29454544-29458189	0	+	29454544	29454544	8553170	5	905,342,128,88,95,	0,999,3087,3383,3550,
#Partially deleted in new
chr16	29454561	29458219	chr16:29454561-29458219	1	+	29454742	29458124	789624	5	369,52,128,88,125,	0,836,3070,3366,3533,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	29455104	29464773	chr16:29455104-29464773	3	+	29455104	29455104	8553170	10	131,52,342,128,88,152,126,98,996,311,	0,293,439,2527,2823,6277,6533,6748,8240,9358,
#Deleted in new
chr16	29455104	29455760	chr16:29455104-29455760	0	+	29455401	29455760	789624	3	131,52,217,	0,293,439,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	29455156	29464963	chr16:29455156-29464963	0	+	29455156	29455156	789624	10	729,128,88,152,126,98,127,95,181,501,	0,2475,2771,6225,6481,6696,8188,8410,9003,9306,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	29456447	29464663	chr16:29456447-29464663	0	+	29456447	29456447	8553170	9	1312,88,152,126,98,127,95,181,201,	0,1480,4934,5190,5405,6897,7119,7712,8015,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	29456969	29458188	chr16:29456969-29458188	0	+	29456969	29456969	8553170	2	1046,94,	0,1125,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	29459888	29464976	chr16:29459888-29464976	3	+	29461385	29464575	789624	8	97,152,126,98,127,95,181,514,	0,1493,1749,1964,3456,3678,4271,4574,
#Partially deleted in new
chr16	29461381	29464326	chr16:29461381-29464326	0	+	29461385	29461867	789624	6	152,101,98,127,95,167,	0,256,471,1963,2185,2778,
#Partially deleted in new
chr16	29461385	29464575	chr16:29461385-29464575	1	+	29461385	29464575	789624	7	148,126,98,127,95,199,113,	0,252,467,1959,2181,2756,3077,
#Partially deleted in new
chr16	29461728	29463955	chr16:29461728-29463955	0	+	29461728	29461728	8553170	2	222,611,	0,1616,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	29464966	29467833	chr16:29464966-29467833	7	-	29464966	29464966	16724991	5	371,64,130,976,152,	0,511,645,1609,2715,
#Deleted in new
chr16	29465221	29465741	chr16:29465221-29465741	5	-	29465221	29465221	16724991	3	116,147,130,	0,173,390,
#Deleted in new
chr16	29465351	29466813	chr16:29465351-29466813	4	-	29465351	29465351	16724991	3	155,130,238,	0,260,1224,
#Deleted in new
chr16	29465394	29466695	chr16:29465394-29466695	4	-	29465394	29465394	16724991	3	147,130,120,	0,217,1181,
#Deleted in new
chr16	29466068	29467265	chr16:29466068-29467265	7	+	29466068	29466068	16724991	2	183,492,	0,705,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	29467160	29467578	chr16:29467160-29467578	5	+	29467160	29467160	16724991	1	418,	0,
#Partially deleted in new
chr16	29475063	29475355	chr16:29475063-29475355	7	+	29475063	29475063	16724991	1	292,	0,
#Partially deleted in new
chr16	29478878	29482591	chr16:29478878-29482591	7	+	29478878	29478878	16724991	2	152,107,	0,3606,
#Partially deleted in new
chr16	29483641	29485859	chr16:29483641-29485859	1	-	29483688	29485827	789624	2	745,597,	0,1621,
#Partially deleted in new
chr16	29484689	29505820	chr16:29484689-29505820	0	-	29484689	29505592	789624	8	1144,36,61,196,100,129,158,37,	0,2504,2649,6777,7085,10789,20783,21094,
#Partially deleted in new
chr16	29485632	29495544	chr16:29485632-29495544	0	-	29491656	29495544	789624	7	201,36,61,102,231,100,66,	0,1561,1706,2776,5834,6142,9846,
#Partially deleted in new
chr16	29485712	29505816	chr16:29485712-29505816	0	-	29500080	29505592	789624	9	121,36,61,196,100,129,86,158,23,	0,1481,1626,5754,6062,9766,14285,19760,20081,
#Partially deleted in new
chr16	29485731	29491662	chr16:29485731-29491662	0	-	29488051	29491662	789624	5	102,36,61,69,196,	0,1462,1607,2291,5735,
#Partially deleted in new
chr16	29486577	29499452	chr16:29486577-29499452	3	-	29486986	29499398	789624	6	652,61,145,100,129,129,	0,761,4889,5197,8901,12746,
#Partially deleted in new
chr16	29491502	29505516	chr16:29491502-29505516	0	-	29500244	29505516	789624	5	160,100,129,277,44,	0,272,3976,8495,13970,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	29491572	29495899	chr16:29491572-29495899	0	-	29491572	29491572	8553170	3	90,100,421,	0,202,3906,
#Partially deleted in new
chr16	29491824	29505999	chr16:29491824-29505999	0	-	29500244	29505592	789624	5	50,129,132,158,206,	0,3654,8318,13648,13969,
#Partially deleted in new
chr16	29527567	29594966	chr16:29527567-29594966	7	-	29527567	29527567	16724991	29	120,160,148,110,202,143,155,164,197,200,141,102,88,119,162,131,272,102,225,173,98,73,126,214,59,137,156,164,80,	0,849,1383,2503,5477,5827,8460,9711,10043,10627,11379,12139,12330,12877,13701,14012,17611,18598,20970,23621,25518,26848,27299,31097,32589,33947,37783,38518,67319,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	29595129	29596137	chr16:29595129-29596137	3	-	29595129	29595129	8553170	1	1008,	0,
#Deleted in new
chr16	29613103	29613640	chr16:29613103-29613640	7	-	29613103	29613103	16724991	1	537,	0,
#Partially deleted in new
chr16	29618784	29636328	chr16:29618784-29636328	7	-	29618784	29618784	16724991	5	144,156,63,94,119,	0,3933,14558,15073,17425,
#Deleted in new
chr16	29624516	29624825	chr16:29624516-29624825	7	+	29624516	29624516	16724991	1	309,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	29662978	29665527	chr16:29662978-29665527	1	+	29663728	29664931	789624	2	102,1833,	0,716,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	29663218	29670490	chr16:29663218-29670490	3	+	29663728	29664931	789624	2	98,6796,	0,476,
#Deleted in new
chr16	29663218	29664793	chr16:29663218-29664793	0	+	29663728	29664793	789624	2	98,1099,	0,476,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	29663254	29670876	chr16:29663254-29670876	0	+	29663728	29664931	789624	3	62,1387,404,	0,440,7218,
#Partially deleted in new
chr16	29663278	29695144	chr16:29663278-29695144	3	+	29679197	29695144	789624	3	38,91,481,	0,15841,31385,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	29668441	29670518	chr16:29668441-29670518	0	+	29668441	29668441	8553170	1	2077,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	29679007	29697776	chr16:29679007-29697776	0	+	29679007	29679007	8553170	3	203,132,578,	0,17988,18191,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	29679036	29698699	chr16:29679036-29698699	3	+	29679197	29697411	0	4	174,536,132,1501,	0,15627,17959,18162,
#Partially deleted in new
chr16	29679181	29697524	chr16:29679181-29697524	1	+	29679197	29697411	789624	4	29,92,132,326,	0,15482,17814,18017,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	29695796	29697995	chr16:29695796-29697995	0	+	29695796	29695796	8553170	1	2199,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	29731050	29731404	chr16:29731050-29731404	3	-	29731050	29731050	8553170	1	354,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	29742462	29746006	chr16:29742462-29746006	3	-	29744276	29744951	789624	2	2489,96,	0,3448,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	29745246	29748299	chr16:29745246-29748299	3	+	29745246	29745246	8553170	2	139,1517,	0,1536,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	29778239	29782973	chr16:29778239-29782973	3	+	29779266	29780419	789624	4	67,62,133,2870,	0,1020,1265,1864,
#Partially deleted in new
chr16	29790718	29805384	chr16:29790718-29805384	1	+	29797026	29805310	0	14	503,196,128,155,210,231,154,136,169,160,68,213,60,122,	0,6174,7655,7874,8256,8545,8909,9194,12050,12730,13279,14095,14396,14544,
#Partially deleted in new
chr16	29790719	29805385	chr16:29790719-29805385	3	+	29790759	29805310	0	14	110,196,128,155,210,231,154,136,169,160,68,213,60,123,	0,6173,7654,7873,8255,8544,8908,9193,12049,12729,13278,14094,14395,14543,
#Partially deleted in new
chr16	29790733	29799184	chr16:29790733-29799184	0	+	29797026	29799184	789624	6	96,49,196,128,155,210,	0,1732,6159,7640,7859,8241,
#Partially deleted in new
chr16	29790753	29798749	chr16:29790753-29798749	0	+	29790759	29797092	789624	4	76,201,128,157,	0,6139,7620,7839,
#Partially deleted in new
chr16	29790970	29805384	chr16:29790970-29805384	1	+	29797026	29805310	0	14	491,196,128,155,210,231,154,136,169,160,68,213,60,122,	0,5922,7403,7622,8004,8293,8657,8942,11798,12478,13027,13843,14144,14292,
#Partially deleted in new
chr16	29796885	29805353	chr16:29796885-29805353	1	+	29797026	29805310	789624	13	203,128,155,210,231,154,136,169,160,110,213,60,91,	0,1488,1707,2089,2378,2742,3027,5883,6563,7112,7928,8229,8377,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	29796987	29800176	chr16:29796987-29800176	0	+	29796987	29796987	8553170	5	101,128,592,518,264,	0,1386,1605,2276,2925,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	29799152	29800220	chr16:29799152-29800220	0	+	29799152	29799152	8553170	5	32,231,154,136,47,	0,111,475,760,1021,
#Deleted in new
chr16	29803399	29805356	chr16:29803399-29805356	0	+	29803399	29803399	8553170	2	209,1359,	0,598,
#Deleted in new
chr16	29803499	29805355	chr16:29803499-29805355	0	+	29803499	29804617	789624	5	109,68,451,60,93,	0,498,1076,1615,1763,
#Deleted in new
chr16	29804429	29804990	chr16:29804429-29804990	3	-	29804429	29804429	8553170	1	561,	0,
#Deleted in new
chr16	29806105	29811160	chr16:29806105-29811160	1	+	29806144	29810231	789624	6	75,87,851,64,172,1084,	0,701,872,2124,2464,3971,
#Deleted in new
chr16	29806495	29807732	chr16:29806495-29807732	3	-	29806495	29806495	8553170	2	45,502,	0,735,
#Deleted in new
chr16	29806536	29811164	chr16:29806536-29811164	1	+	29806701	29810231	789624	5	357,851,64,172,1088,	0,441,1693,2033,3540,
#Deleted in new
chr16	29806549	29811134	chr16:29806549-29811134	1	+	29806701	29810231	789624	3	344,172,1058,	0,2020,3527,
#Deleted in new
chr16	29806570	29811158	chr16:29806570-29811158	1	+	29806701	29810389	789624	3	323,89,1049,	0,407,3539,
#Deleted in new
chr16	29806570	29811158	chr16:29806570-29811158	1	+	29806701	29810389	789624	3	323,89,1043,	0,407,3545,
#Deleted in new
chr16	29806595	29811164	chr16:29806595-29811164	3	+	29806701	29809742	789624	6	298,851,64,172,225,1088,	0,382,1634,1974,2944,3481,
#Deleted in new
chr16	29806647	29810266	chr16:29806647-29810266	0	+	29806701	29808292	789624	4	246,64,172,190,	0,1582,1922,3429,
#Deleted in new
chr16	29807373	29810379	chr16:29807373-29810379	1	+	29807457	29810231	789624	6	399,12,41,64,172,303,	0,401,414,856,1196,2703,
#Deleted in new
chr16	29807535	29808847	chr16:29807535-29808847	0	+	29807535	29808821	789624	3	293,64,278,	0,694,1034,
#Deleted in new
chr16	29807774	29811163	chr16:29807774-29811163	0	+	29807774	29811153	789624	5	54,64,172,151,158,	0,455,795,2302,3231,
#Deleted in new
chr16	29807817	29810418	chr16:29807817-29810418	0	+	29807817	29810231	789624	4	68,64,172,342,	0,412,752,2259,
#Deleted in new
chr16	29807928	29809693	chr16:29807928-29809693	0	+	29808659	29809693	789624	4	85,64,172,154,	0,301,641,1611,
#Deleted in new
chr16	29808050	29811125	chr16:29808050-29811125	1	+	29808659	29810231	789624	3	243,172,1049,	0,519,2026,
#Deleted in new
chr16	29808092	29808935	chr16:29808092-29808935	1	+	29808659	29808821	789624	2	201,366,	0,477,
#Deleted in new
chr16	29808145	29811128	chr16:29808145-29811128	1	+	29808659	29809742	789624	4	148,172,232,1041,	0,424,1394,1942,
#Deleted in new
chr16	29808419	29811067	chr16:29808419-29811067	0	+	29808419	29808419	8553170	2	322,991,	0,1657,
#Deleted in new
chr16	29808635	29811985	chr16:29808635-29811985	1	-	29808635	29808635	8553170	2	498,1951,	0,1399,
#Deleted in new
chr16	29808648	29809707	chr16:29808648-29809707	1	-	29808648	29808648	8553170	3	209,137,148,	0,526,911,
#Deleted in new
chr16	29808678	29812227	chr16:29808678-29812227	3	+	29808678	29808678	8553170	3	63,151,259,	0,1398,3290,
#Partially deleted in new
chr16	29808928	29820366	chr16:29808928-29820366	3	-	29808928	29808928	8553170	4	205,139,62,183,	0,1106,10611,11255,
#Deleted in new
chr16	29811381	29812328	chr16:29811381-29812328	0	+	29811381	29811381	8553170	2	174,360,	0,587,
#Deleted in new
chr16	29811546	29813439	chr16:29811546-29813439	0	+	29813054	29813439	789624	2	70,450,	0,1443,
#Deleted in new
chr16	29811855	29813372	chr16:29811855-29813372	0	+	29813054	29813372	789624	2	181,383,	0,1134,
#Deleted in new
chr16	29811925	29813038	chr16:29811925-29813038	0	+	29811925	29811925	8553170	2	51,49,	0,1064,
#Deleted in new
chr16	29812058	29813019	chr16:29812058-29813019	0	+	29812058	29812058	8553170	3	29,41,30,	0,224,931,
#Deleted in new
chr16	29812087	29815881	chr16:29812087-29815881	3	+	29813054	29814638	789624	4	236,944,133,1254,	0,902,2245,2540,
#Deleted in new
chr16	29812149	29815682	chr16:29812149-29815682	1	+	29813054	29813954	789624	2	174,2693,	0,840,
#Deleted in new
chr16	29812178	29815694	chr16:29812178-29815694	0	+	29813054	29813954	789624	4	145,1020,133,1067,	0,811,2154,2449,
#Deleted in new
chr16	29812180	29814429	chr16:29812180-29814429	0	+	29813054	29814429	789624	3	143,404,97,	0,809,2152,
#Deleted in new
chr16	29812183	29815711	chr16:29812183-29815711	0	+	29813054	29813739	789624	5	140,404,248,133,1084,	0,806,1502,2149,2444,
#Deleted in new
chr16	29812190	29814725	chr16:29812190-29814725	1	+	29813054	29814638	789624	3	133,944,393,	0,799,2142,
#Deleted in new
chr16	29812192	29815703	chr16:29812192-29815703	1	+	29813054	29814634	789624	4	131,404,122,1076,	0,797,2151,2435,
#Deleted in new
chr16	29812196	29815643	chr16:29812196-29815643	1	+	29813054	29814634	789624	4	127,789,133,1016,	0,793,2136,2431,
#Deleted in new
chr16	29812236	29813729	chr16:29812236-29813729	0	+	29812236	29812236	8553170	2	87,44,	0,1449,
#Deleted in new
chr16	29812240	29815880	chr16:29812240-29815880	1	+	29813054	29813954	789624	2	111,2891,	0,749,
#Deleted in new
chr16	29812240	29815881	chr16:29812240-29815881	1	+	29813054	29814638	789624	4	83,944,133,1254,	0,749,2092,2387,
#Partially deleted in new
chr16	29812260	29820092	chr16:29812260-29820092	3	+	29813054	29816584	789624	6	63,944,122,502,83,538,	0,729,2083,4245,4949,7294,
#Deleted in new
chr16	29812261	29815679	chr16:29812261-29815679	1	+	29813054	29814634	789624	4	62,786,133,1052,	0,728,2071,2366,
#Deleted in new
chr16	29812290	29815892	chr16:29812290-29815892	1	+	29813054	29814638	789624	4	61,944,133,1265,	0,699,2042,2337,
#Deleted in new
chr16	29812344	29815643	chr16:29812344-29815643	1	+	29813054	29814638	789624	4	60,944,133,1016,	0,645,1988,2283,
#Deleted in new
chr16	29812374	29813408	chr16:29812374-29813408	0	+	29813054	29813408	789624	2	98,419,	0,615,
#Deleted in new
chr16	29814434	29814730	chr16:29814434-29814730	0	+	29814434	29814730	789624	2	31,69,	0,227,
#Deleted in new
chr16	29814778	29815566	chr16:29814778-29815566	0	+	29814778	29814778	8553170	2	27,73,	0,715,
#Partially deleted in new
chr16	29815951	29820117	chr16:29815951-29820117	3	+	29816525	29819754	789624	3	1056,83,563,	0,1258,3603,
#Partially deleted in new
chr16	29817238	29830627	chr16:29817238-29830627	3	+	29817238	29819754	789624	3	54,348,154,	0,2316,13235,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	29817982	29821220	chr16:29817982-29821220	1	-	29817982	29817982	8553170	3	562,62,343,	0,1557,2895,
#Deleted in new
chr16	29819416	29821252	chr16:29819416-29821252	0	-	29819416	29819416	8553170	2	185,375,	0,1461,
#Partially deleted in new
chr16	29820393	29848039	chr16:29820393-29848039	3	+	29830549	29847989	0	15	117,201,196,124,132,95,237,282,245,198,387,117,127,189,278,	0,10080,10484,13339,13541,15310,16328,19784,21202,21521,24099,25469,25764,26803,27368,
#Partially deleted in new
chr16	29820393	29835787	chr16:29820393-29835787	0	+	29830549	29835787	789624	6	117,201,196,124,132,84,	0,10080,10484,13339,13541,15310,
#Partially deleted in new
chr16	29820407	29848039	chr16:29820407-29848039	1	+	29830549	29847989	0	15	103,160,196,124,132,95,237,282,245,198,387,117,127,189,278,	0,10107,10470,13325,13527,15296,16314,19770,21188,21507,24085,25455,25750,26789,27354,
#Partially deleted in new
chr16	29820451	29840271	chr16:29820451-29840271	0	+	29830549	29836803	789624	5	59,160,39,237,94,	0,10063,15308,16270,19726,
#Partially deleted in new
chr16	29820465	29830974	chr16:29820465-29830974	0	+	29820465	29820465	8553170	2	45,501,	0,10008,
#Partially deleted in new
chr16	29820472	29834137	chr16:29820472-29834137	0	+	29830549	29833781	789624	4	38,160,124,203,	0,10042,13260,13462,
#Partially deleted in new
chr16	29820472	29841651	chr16:29820472-29841651	0	+	29830549	29841651	789624	5	38,201,196,57,56,	0,10001,10405,19930,21123,
#Partially deleted in new
chr16	29820472	29831035	chr16:29820472-29831035	0	+	29830549	29831035	789624	4	38,151,201,158,	0,5469,10001,10405,
#Partially deleted in new
chr16	29820476	29831769	chr16:29820476-29831769	0	+	29820476	29820476	8553170	4	34,201,196,126,	0,9997,10401,11167,
#Partially deleted in new
chr16	29820477	29840383	chr16:29820477-29840383	0	+	29830549	29836803	789624	4	33,122,188,206,	0,10037,16293,19700,
#Partially deleted in new
chr16	29821323	29830675	chr16:29821323-29830675	0	+	29830549	29830675	789624	2	50,161,	0,9191,
#Partially deleted in new
chr16	29821324	29833857	chr16:29821324-29833857	0	+	29830549	29833857	789624	5	67,110,160,196,125,	0,1222,9190,9553,12408,
#Partially deleted in new
chr16	29829611	29831074	chr16:29829611-29831074	0	+	29830549	29831074	789624	3	51,160,197,	0,903,1266,
#Partially deleted in new
chr16	29829729	29830901	chr16:29829729-29830901	0	+	29829729	29829729	8553170	3	586,201,24,	0,744,1148,
#Partially deleted in new
chr16	29830549	29836803	chr16:29830549-29836803	1	+	29830549	29836803	789624	2	87,33,	0,6221,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	29833336	29835505	chr16:29833336-29835505	0	+	29833336	29833336	8553170	2	520,1571,	0,598,
#Partially deleted in new
chr16	29833826	29835785	chr16:29833826-29835785	0	+	29833826	29834089	789624	3	30,463,82,	0,108,1877,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	29834185	29840267	chr16:29834185-29840267	0	+	29834185	29834185	8553170	4	252,95,237,90,	0,1518,2536,5992,
#Partially deleted in new
chr16	29840093	29841790	chr16:29840093-29841790	0	+	29840093	29840093	8553170	2	366,195,	0,1502,
#Partially deleted in new
chr16	29858356	29863736	chr16:29858356-29863736	3	-	29859188	29862857	789624	6	978,82,82,154,135,922,	0,1085,2224,2749,4229,4458,
#Partially deleted in new
chr16	29858357	29863205	chr16:29858357-29863205	0	-	29858357	29858357	8553170	5	977,82,679,284,231,	0,1084,2223,4228,4617,
#Deleted in new
chr16	29858357	29859469	chr16:29858357-29859469	0	-	29858357	29858357	8553170	4	60,186,160,28,	0,148,817,1084,
#Partially deleted in new
chr16	29858361	29861694	chr16:29858361-29861694	1	-	29859188	29861509	789624	4	973,82,82,589,	0,1080,2219,2744,
#Partially deleted in new
chr16	29858371	29863204	chr16:29858371-29863204	1	-	29859188	29862857	789624	5	963,82,82,154,390,	0,1070,2209,2734,4443,
#Partially deleted in new
chr16	29858384	29863205	chr16:29858384-29863205	1	-	29859188	29862857	789624	7	950,82,82,154,135,51,78,	0,1057,2196,2721,4201,4430,4743,
#Partially deleted in new
chr16	29858727	29863205	chr16:29858727-29863205	1	-	29859188	29862857	789624	7	607,82,82,154,135,55,231,	0,714,1853,2378,3858,4087,4247,
#Partially deleted in new
chr16	29858734	29862890	chr16:29858734-29862890	1	-	29859274	29862857	789624	5	600,82,154,135,76,	0,1846,2371,3851,4080,
#Partially deleted in new
chr16	29859149	29863276	chr16:29859149-29863276	0	-	29861226	29862857	789624	6	185,82,82,154,50,462,	0,292,1431,1956,3436,3665,
#Partially deleted in new
chr16	29859459	29863414	chr16:29859459-29863414	0	-	29859459	29859459	8553170	4	64,82,154,829,	0,1121,1646,3126,
#Deleted in new
chr16	29862759	29863417	chr16:29862759-29863417	3	+	29862759	29862759	8553170	1	658,	0,
#Partially deleted in new
chr16	29863592	29868053	chr16:29863592-29868053	7	+	29863592	29863592	16724991	6	138,88,148,78,87,190,	0,711,1135,1567,1763,4271,
#Partially deleted in new
chr16	29863833	29868048	chr16:29863833-29868048	4	+	29863833	29863833	16724991	6	171,88,148,78,87,185,	0,470,894,1326,1522,4030,
#Deleted in new
chr16	29864307	29865442	chr16:29864307-29865442	5	+	29864307	29864307	16724991	4	84,145,34,58,	0,423,852,1077,
#Partially deleted in new
chr16	29871158	29899547	chr16:29871158-29899547	3	-	29871698	29899019	789624	17	570,97,118,192,192,195,197,139,201,164,169,186,202,140,300,132,607,	0,1028,1250,2081,2379,5597,6112,7128,8705,14427,16490,17381,24100,24562,25663,26694,27782,
#Partially deleted in new
chr16	29871158	29899064	chr16:29871158-29899064	1	-	29871698	29899019	789624	16	570,97,118,39,192,192,195,197,139,201,164,169,186,300,132,124,	0,1028,1250,1546,2081,2379,5597,6112,7128,8705,14427,16490,17381,25663,26694,27782,
#Partially deleted in new
chr16	29871158	29899090	chr16:29871158-29899090	1	-	29871698	29899019	789624	18	570,97,118,39,192,192,195,197,139,201,164,169,186,202,140,90,132,150,	0,1028,1250,1546,2081,2379,5597,6112,7128,8705,14427,16490,17381,24100,24562,25663,26694,27782,
#Partially deleted in new
chr16	29871160	29899264	chr16:29871160-29899264	1	-	29871698	29899019	789624	17	568,97,118,39,192,192,195,197,139,201,164,169,186,202,140,300,324,	0,1026,1248,1544,2079,2377,5595,6110,7126,8703,14425,16488,17379,24098,24560,25661,27780,
#Partially deleted in new
chr16	29871160	29899264	chr16:29871160-29899264	1	-	29871698	29899019	789624	18	568,97,118,39,192,192,195,197,139,201,164,169,186,202,140,300,132,324,	0,1026,1248,1544,2079,2377,5595,6110,7126,8703,14425,16488,17379,24098,24560,25661,26692,27780,
#Partially deleted in new
chr16	29876764	29888593	chr16:29876764-29888593	0	-	29876764	29888593	789624	6	186,197,139,164,169,54,	0,506,1522,8821,10884,11775,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	29876853	29886019	chr16:29876853-29886019	0	-	29876853	29876853	8553170	5	97,197,139,201,434,	0,417,1433,3010,8732,
#Partially deleted in new
chr16	29888539	29897928	chr16:29888539-29897928	0	-	29888539	29888539	8553170	4	186,202,300,76,	0,6719,8282,9313,
#Deleted in new
chr16	29896958	29899109	chr16:29896958-29899109	0	-	29896958	29899019	789624	2	163,169,	0,1982,
#Partially deleted in new
chr16	29900374	29905887	chr16:29900374-29905887	0	+	29901814	29905887	789624	4	192,369,114,100,	0,1177,4477,5413,
#Partially deleted in new
chr16	29900378	29906056	chr16:29900378-29906056	1	+	29901814	29905897	789624	4	363,369,114,269,	0,1173,4473,5409,
#Partially deleted in new
chr16	29900719	29906056	chr16:29900719-29906056	3	+	29900971	29905897	789624	3	1201,114,269,	0,4132,5068,
#Partially deleted in new
chr16	29900857	29919632	chr16:29900857-29919632	0	+	29900971	29905897	789624	4	1063,114,172,102,	0,3994,4930,18673,
#Partially deleted in new
chr16	29900857	29919864	chr16:29900857-29919864	0	+	29900971	29905897	789624	5	1063,114,172,49,334,	0,3994,4930,5221,18673,
#Partially deleted in new
chr16	29905011	29926209	chr16:29905011-29926209	0	-	29906871	29926033	0	7	140,616,196,53,90,170,420,	0,1481,5966,6803,6948,18178,20778,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	29906335	29927035	chr16:29906335-29927035	3	-	29906871	29926033	0	6	773,196,53,90,170,1246,	0,4642,5479,5624,16854,19454,
#Partially deleted in new
chr16	29906341	29925835	chr16:29906341-29925835	0	-	29911810	29925835	789624	6	767,580,207,90,170,46,	0,4636,5319,5618,16848,19448,
#Partially deleted in new
chr16	29906352	29923237	chr16:29906352-29923237	0	-	29906530	29923237	789624	5	214,196,53,90,48,	0,4625,5462,5607,16837,
#Partially deleted in new
chr16	29906962	29912370	chr16:29906962-29912370	0	-	29906962	29906962	8553170	4	146,196,53,411,	0,4015,4852,4997,
#Partially deleted in new
chr16	29911432	29923361	chr16:29911432-29923361	0	-	29911432	29911432	8553170	4	125,53,90,172,	0,382,527,11757,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	29913143	29915337	chr16:29913143-29915337	3	-	29913143	29913143	8553170	1	2194,	0,
#Partially deleted in new
chr16	29919500	29923320	chr16:29919500-29923320	0	-	29919519	29923320	789624	2	133,131,	0,3689,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	29919634	29926236	chr16:29919634-29926236	1	-	29922973	29926033	789624	2	3725,447,	0,6155,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	29919634	29926215	chr16:29919634-29926215	0	-	29923343	29926033	8553170	3	3725,43,426,	0,5904,6155,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	29919669	29926205	chr16:29919669-29926205	1	-	29921853	29926033	8553170	3	2292,170,416,	0,3520,6120,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	29919757	29926228	chr16:29919757-29926228	0	-	29923343	29926033	8553170	4	2204,170,43,439,	0,3432,5781,6032,
#Partially deleted in new
chr16	29923236	29926212	chr16:29923236-29926212	0	-	29923236	29923236	8553170	3	123,43,423,	0,2302,2553,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	29926835	29928933	chr16:29926835-29928933	3	+	29926835	29926835	8553170	2	1096,666,	0,1432,
#Partially deleted in new
chr16	29940884	29973050	chr16:29940884-29973050	3	+	29963143	29971545	789624	6	133,199,190,230,171,101,	0,22225,22515,27140,30523,32065,
#Partially deleted in new
chr16	29962029	29973052	chr16:29962029-29973052	1	+	29963143	29971545	789624	6	103,202,190,230,171,103,	0,1077,1370,5995,9378,10920,
#Partially deleted in new
chr16	29962029	29968117	chr16:29962029-29968117	0	+	29963143	29968117	789624	4	103,202,190,93,	0,1077,1370,5995,
#Partially deleted in new
chr16	29962086	29971466	chr16:29962086-29971466	0	+	29963143	29971466	789624	5	46,199,190,230,56,	0,1023,1313,5938,9324,
#Partially deleted in new
chr16	29962103	29972005	chr16:29962103-29972005	1	+	29963143	29971545	789624	5	29,202,190,230,598,	0,1003,1296,5921,9304,
#Partially deleted in new
chr16	29962676	29973018	chr16:29962676-29973018	1	+	29963143	29971545	789624	5	632,190,230,171,69,	0,723,5348,8731,10273,
#Partially deleted in new
chr16	29963171	29973048	chr16:29963171-29973048	0	+	29963171	29971545	789624	6	137,190,230,171,99,99,	0,228,4853,8236,8870,9778,
#Partially deleted in new
chr16	29963399	29968594	chr16:29963399-29968594	0	+	29963399	29968344	789624	2	190,570,	0,4625,
#Partially deleted in new
chr16	29963415	29973047	chr16:29963415-29973047	0	+	29963415	29971532	789624	3	174,171,98,	0,7992,9534,
#Partially deleted in new
chr16	29973640	29988398	chr16:29973640-29988398	1	+	29977772	29987980	789624	16	1008,167,72,102,46,97,114,92,94,82,168,261,162,366,204,2134,	0,4097,4448,4611,5158,5333,5554,5776,8020,8218,9093,9431,9862,11572,12017,12624,
#Partially deleted in new
chr16	29974181	29988181	chr16:29974181-29988181	1	+	29977772	29987980	789624	17	467,167,72,102,46,97,114,92,94,82,168,261,162,366,204,240,1338,	0,3556,3907,4070,4617,4792,5013,5235,7479,7677,8552,8890,9321,11031,11476,12083,12662,
#Partially deleted in new
chr16	29974280	29992261	chr16:29974280-29992261	3	+	29977772	29991568	789624	19	368,167,72,102,46,97,114,92,94,82,168,261,162,366,204,240,213,183,1215,	0,3457,3808,3971,4518,4693,4914,5136,7380,7578,8453,8791,9222,10932,11377,11984,15312,16503,16766,
#Partially deleted in new
chr16	29980351	29988398	chr16:29980351-29988398	1	+	29981524	29987980	789624	8	1403,82,168,261,162,366,204,2134,	0,1507,2382,2720,3151,4861,5306,5913,
#Deleted in new
chr16	29985117	29987971	chr16:29985117-29987971	0	+	29985117	29985117	8553170	3	461,204,1707,	0,540,1147,
#Deleted in new
chr16	29989909	29991710	chr16:29989909-29991710	0	+	29989909	29989909	8553170	2	1057,664,	0,1137,
#Deleted in new
chr16	29992320	29996436	chr16:29992320-29996436	3	-	29993206	29995605	789624	7	1050,99,169,938,115,121,896,	0,1138,1319,1585,2782,3022,3220,
#Deleted in new
chr16	29992989	29995643	chr16:29992989-29995643	1	-	29993499	29995605	789624	6	381,99,169,115,121,103,	0,469,650,2113,2353,2551,
#Deleted in new
chr16	29992995	29996074	chr16:29992995-29996074	0	-	29992995	29992995	8553170	6	375,99,169,196,115,732,	0,463,644,1652,2107,2347,
#Deleted in new
chr16	29993466	29995592	chr16:29993466-29995592	0	-	29993466	29993466	8553170	3	342,361,52,	0,1636,2074,
#Deleted in new
chr16	29994759	29996063	chr16:29994759-29996063	0	-	29994759	29994759	8553170	2	84,523,	0,781,
#Deleted in new
chr16	29994824	29995608	chr16:29994824-29995608	0	-	29994824	29994824	8553170	3	393,121,68,	0,518,716,
#Deleted in new
chr16	29995242	29996057	chr16:29995242-29996057	0	-	29995242	29995242	8553170	2	221,517,	0,298,
#Partially deleted in new
chr16	29995293	30005793	chr16:29995293-30005793	3	+	29996310	30005442	789624	7	1098,71,53,79,112,117,573,	0,1253,1514,5464,5635,6120,9927,
#Partially deleted in new
chr16	29995714	30005717	chr16:29995714-30005717	1	+	29996310	30005442	789624	6	677,71,53,79,112,497,	0,832,1093,5043,5214,9506,
#Partially deleted in new
chr16	29996209	30001229	chr16:29996209-30001229	1	+	29996310	30001229	789624	6	182,71,53,79,112,18,	0,337,598,4548,4719,5002,
#Deleted in new
chr16	29996217	29996807	chr16:29996217-29996807	0	+	29996217	29996217	8553170	2	174,261,	0,329,
#Partially deleted in new
chr16	29996237	30005774	chr16:29996237-30005774	0	+	29996237	29996237	8553170	7	154,71,53,79,112,3446,554,	0,309,570,4520,4691,4974,8983,
#Partially deleted in new
chr16	29996243	30001575	chr16:29996243-30001575	1	+	29996310	30001539	789624	6	148,71,53,79,112,162,	0,303,564,4514,4685,5170,
#Partially deleted in new
chr16	29996243	30000812	chr16:29996243-30000812	0	+	29996243	29996243	8553170	3	374,53,55,	0,564,4514,
#Partially deleted in new
chr16	29996245	30005762	chr16:29996245-30005762	0	+	29996310	30001229	789624	8	146,71,53,79,112,319,90,542,	0,301,562,4512,4683,4966,8322,8975,
#Partially deleted in new
chr16	29996245	30005323	chr16:29996245-30005323	0	+	29996310	30001229	789624	7	146,71,53,79,112,319,103,	0,301,562,4512,4683,4966,8975,
#Partially deleted in new
chr16	29996249	30005577	chr16:29996249-30005577	1	+	29996310	30005442	789624	7	142,71,53,79,112,66,357,	0,297,558,4508,4679,5215,8971,
#Partially deleted in new
chr16	29996250	30005793	chr16:29996250-30005793	0	+	29996310	30002489	789624	11	141,71,53,79,112,117,578,91,21,90,573,	0,296,557,4507,4678,5163,6185,7185,7399,8317,8970,
#Partially deleted in new
chr16	29996251	29999568	chr16:29996251-29999568	0	+	29996251	29996251	8553170	4	140,71,53,299,	0,295,556,3018,
#Partially deleted in new
chr16	29996273	30005790	chr16:29996273-30005790	0	+	29996273	29996273	8553170	10	118,71,53,79,112,1802,91,65,103,570,	0,273,534,4484,4655,4938,7162,7376,8281,8947,
#Deleted in new
chr16	30000970	30005435	chr16:30000970-30005435	0	+	30000970	30005435	789624	3	70,117,68,	0,443,4397,
#Partially deleted in new
chr16	30005508	30011080	chr16:30005508-30011080	1	-	30006185	30010222	0	11	823,97,82,164,60,127,110,75,80,275,178,	0,904,1087,1276,1522,1664,3487,3693,3969,4452,5394,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	30005515	30011722	chr16:30005515-30011722	0	-	30005515	30005515	8553170	9	816,82,164,2075,75,80,275,87,95,	0,1080,1269,1515,3686,3962,4445,5387,6112,
#Partially deleted in new
chr16	30005515	30011421	chr16:30005515-30011421	1	-	30006185	30010222	0	12	816,97,82,164,60,127,110,75,80,275,87,92,	0,897,1080,1269,1515,1657,3480,3686,3962,4445,5387,5814,
#Deleted in new
chr16	30005643	30007253	chr16:30005643-30007253	0	-	30005643	30005643	8553170	5	688,97,82,164,223,	0,769,952,1141,1387,
#Partially deleted in new
chr16	30005798	30011421	chr16:30005798-30011421	1	-	30006185	30010222	0	12	533,97,82,164,60,127,110,75,80,271,91,92,	0,614,797,986,1232,1374,3197,3403,3679,4162,5100,5531,
#Partially deleted in new
chr16	30005871	30012304	chr16:30005871-30012304	3	-	30006185	30010222	0	11	460,97,82,164,60,127,110,75,80,275,100,	0,541,724,913,1159,1301,3124,3330,3606,4089,6333,
#Partially deleted in new
chr16	30006118	30011027	chr16:30006118-30011027	0	-	30006638	30009264	0	11	213,97,82,93,60,127,110,75,80,66,125,	0,294,477,737,912,1054,2877,3083,3359,3842,4784,
#Partially deleted in new
chr16	30006293	30011027	chr16:30006293-30011027	0	-	30007284	30009264	789624	10	216,82,164,60,127,102,75,80,66,125,	0,302,491,737,879,2710,2908,3184,3667,4609,
#Partially deleted in new
chr16	30007172	30010984	chr16:30007172-30010984	0	-	30007172	30010222	789624	6	127,110,75,80,380,86,	0,1823,2029,2305,2788,3726,
#Partially deleted in new
chr16	30007215	30012336	chr16:30007215-30012336	0	-	30007215	30010222	789624	7	84,110,75,80,275,87,132,	0,1780,1986,2262,2745,3687,4989,
#Partially deleted in new
chr16	30007231	30010991	chr16:30007231-30010991	0	-	30007231	30009264	789624	7	68,110,75,80,66,68,89,	0,1764,1970,2246,2729,3041,3671,
#Deleted in new
chr16	30009008	30010516	chr16:30009008-30010516	0	-	30009008	30009264	789624	5	97,75,80,66,244,	0,193,469,952,1264,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	30009225	30021295	chr16:30009225-30021295	0	-	30009225	30009264	789624	6	51,80,66,87,130,113,	0,252,735,1677,4241,11957,
#Deleted in new
chr16	30009285	30010993	chr16:30009285-30010993	0	-	30009285	30009285	8553170	4	272,66,68,91,	0,675,987,1617,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	30010918	30023219	chr16:30010918-30023219	0	-	30010918	30010918	8553170	4	71,130,56,226,	0,2548,4288,12075,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	30012263	30021688	chr16:30012263-30021688	0	-	30012263	30012263	8553170	3	414,130,506,	0,1203,8919,
#Partially deleted in new
chr16	30014969	30023101	chr16:30014969-30023101	0	-	30014969	30014969	8553170	3	128,56,108,	0,237,8024,
#Partially deleted in new
chr16	30018641	30023270	chr16:30018641-30023270	0	-	30018641	30018641	8553170	2	262,277,	0,4352,
#Deleted in new
chr16	30023333	30024702	chr16:30023333-30024702	3	+	30023354	30024227	789624	4	71,239,88,497,	0,313,665,872,
#Deleted in new
chr16	30023333	30024300	chr16:30023333-30024300	0	+	30023354	30023796	789624	4	71,159,88,95,	0,393,665,872,
#Partially deleted in new
chr16	30023725	30027736	chr16:30023725-30027736	0	+	30023725	30027619	789624	4	160,88,86,128,	0,273,3362,3883,
#Partially deleted in new
chr16	30023752	30027702	chr16:30023752-30027702	0	+	30023752	30027619	789624	2	133,100,	0,3850,
#Partially deleted in new
chr16	30024426	30030084	chr16:30024426-30030084	1	-	30025182	30029490	789624	5	1041,96,235,84,25,	0,1299,2182,5005,5633,
#Partially deleted in new
chr16	30024426	30031259	chr16:30024426-30031259	3	-	30025182	30030527	789624	5	1041,96,235,84,857,	0,1299,2182,5005,5976,
#Partially deleted in new
chr16	30024451	30029536	chr16:30024451-30029536	1	-	30025602	30029490	789624	3	1370,235,105,	0,2157,4980,
#Partially deleted in new
chr16	30026602	30036530	chr16:30026602-30036530	0	-	30035346	30035475	789624	4	241,84,175,376,	0,2829,8704,9552,
#Partially deleted in new
chr16	30026613	30052978	chr16:30026613-30052978	0	-	30026613	30035475	789624	7	230,84,131,60,162,65,205,	0,2818,8737,9541,14381,19709,26160,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	30032664	30036530	chr16:30032664-30036530	0	-	30032664	30032664	8553170	3	1102,321,376,	0,2496,3490,
#Partially deleted in new
chr16	30035422	30052923	chr16:30035422-30052923	0	-	30035422	30035475	789624	5	59,162,65,66,150,	0,5572,10900,11143,17351,
#Partially deleted in new
chr16	30053089	30070420	chr16:30053089-30070420	1	+	30053493	30063842	789624	14	128,36,144,156,520,82,133,212,55,161,84,175,200,304,	0,374,1694,2082,10639,11334,14144,14360,15556,15728,16216,16409,16740,17027,
#Partially deleted in new
chr16	30053089	30070420	chr16:30053089-30070420	3	+	30067254	30070212	789624	14	128,36,144,156,520,82,133,212,55,173,84,175,200,304,	0,374,1694,2082,10639,11334,14144,14360,15556,15728,16216,16409,16740,17027,
#Partially deleted in new
chr16	30053122	30070403	chr16:30053122-30070403	1	+	30053493	30064498	789624	16	95,36,144,156,113,343,82,154,133,212,55,161,84,175,200,287,	0,341,1661,2049,5818,10606,11301,13762,14111,14327,15523,15695,16183,16376,16707,16994,
#Partially deleted in new
chr16	30053126	30070413	chr16:30053126-30070413	1	+	30053493	30063842	789624	12	373,156,520,82,133,212,55,161,84,175,200,297,	0,2045,10602,11297,14107,14323,15519,15691,16179,16372,16703,16990,
#Partially deleted in new
chr16	30053126	30063928	chr16:30053126-30063928	1	+	30053493	30063842	789624	2	373,200,	0,10602,
#Partially deleted in new
chr16	30053133	30067290	chr16:30053133-30067290	1	+	30053493	30063842	789624	6	84,36,156,520,82,57,	0,330,2038,10595,11290,14100,
#Partially deleted in new
chr16	30053159	30064038	chr16:30053159-30064038	1	+	30053493	30063842	789624	4	58,36,144,310,	0,304,1624,10569,
#Partially deleted in new
chr16	30053337	30055207	chr16:30053337-30055207	0	+	30053337	30053337	8553170	2	162,424,	0,1446,
#Deleted in new
chr16	30054574	30055328	chr16:30054574-30055328	0	+	30054574	30054574	8553170	2	353,157,	0,597,
#Deleted in new
chr16	30064163	30064840	chr16:30064163-30064840	0	+	30064163	30064163	8553170	2	85,417,	0,260,
#Partially deleted in new
chr16	30064171	30068957	chr16:30064171-30068957	0	+	30067254	30068957	789624	6	77,82,100,212,55,140,	0,252,3062,3278,4474,4646,
#Partially deleted in new
chr16	30064184	30070257	chr16:30064184-30070257	1	+	30067254	30070212	0	11	64,82,52,133,212,55,161,84,175,200,141,	0,239,1691,3049,3265,4461,4633,5121,5314,5645,5932,
#Partially deleted in new
chr16	30064273	30070414	chr16:30064273-30070414	3	+	30067254	30070212	0	9	232,133,212,55,161,84,175,200,298,	0,2960,3176,4372,4544,5032,5225,5556,5843,
#Deleted in new
chr16	30064305	30064825	chr16:30064305-30064825	3	-	30064305	30064305	8553170	1	520,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	30064433	30070457	chr16:30064433-30070457	0	+	30064433	30064433	8553170	7	72,133,1529,84,175,200,341,	0,2800,3016,4872,5065,5396,5683,
#Partially deleted in new
chr16	30064496	30070411	chr16:30064496-30070411	1	+	30067254	30070212	0	9	288,133,212,55,161,84,175,200,295,	0,2737,2953,4149,4321,4809,5002,5333,5620,
#Partially deleted in new
chr16	30064738	30068905	chr16:30064738-30068905	0	+	30067254	30068905	789624	6	46,52,133,212,55,88,	0,1137,2495,2711,3907,4079,
#Partially deleted in new
chr16	30065672	30070420	chr16:30065672-30070420	1	+	30067254	30070212	0	9	255,133,212,55,161,84,175,200,304,	0,1561,1777,2973,3145,3633,3826,4157,4444,
#Partially deleted in new
chr16	30065733	30070420	chr16:30065733-30070420	1	+	30066897	30070212	0	10	194,154,133,212,55,161,84,175,200,304,	0,1151,1500,1716,2912,3084,3572,3765,4096,4383,
#Partially deleted in new
chr16	30065760	30070414	chr16:30065760-30070414	1	+	30066897	30070212	0	10	167,154,133,212,55,161,84,175,200,298,	0,1124,1473,1689,2885,3057,3545,3738,4069,4356,
#Partially deleted in new
chr16	30065760	30070414	chr16:30065760-30070414	1	+	30067254	30070212	0	9	167,133,212,55,161,84,175,200,298,	0,1473,1689,2885,3057,3545,3738,4069,4356,
#Deleted in new
chr16	30065761	30067621	chr16:30065761-30067621	0	+	30065761	30065761	8553170	2	166,388,	0,1472,
#Partially deleted in new
chr16	30065771	30070352	chr16:30065771-30070352	1	+	30067254	30070116	789624	8	156,133,212,55,161,84,175,523,	0,1462,1678,2874,3046,3534,3727,4058,
#Partially deleted in new
chr16	30065776	30070380	chr16:30065776-30070380	1	+	30067254	30070212	789624	9	151,133,212,55,173,84,175,200,264,	0,1457,1673,2869,3041,3529,3722,4053,4340,
#Partially deleted in new
chr16	30065857	30068892	chr16:30065857-30068892	0	+	30067254	30068892	789624	5	70,100,212,55,75,	0,1376,1592,2788,2960,
#Partially deleted in new
chr16	30066186	30069547	chr16:30066186-30069547	0	+	30066897	30069547	789624	8	58,154,133,212,55,161,84,49,	0,698,1047,1263,2459,2631,3119,3312,
#Partially deleted in new
chr16	30067502	30069892	chr16:30067502-30069892	0	+	30067502	30069892	789624	5	159,55,161,175,63,	0,1143,1315,1996,2327,
#Deleted in new
chr16	30068836	30069528	chr16:30068836-30069528	0	+	30068836	30068836	8553170	2	142,223,	0,469,
#Deleted in new
chr16	30069261	30070414	chr16:30069261-30070414	0	+	30069261	30069261	8553170	4	128,175,200,298,	0,237,568,855,
#Deleted in new
chr16	30069577	30070417	chr16:30069577-30070417	0	+	30069577	30070212	789624	4	96,200,102,140,	0,252,539,700,
#Partially deleted in new
chr16	30075977	30084779	chr16:30075977-30084779	0	+	30076377	30082749	789624	7	117,161,51,102,174,127,114,	0,337,6506,6768,7416,7677,8688,
#Partially deleted in new
chr16	30075989	30085377	chr16:30075989-30085377	3	+	30076377	30085062	789624	9	105,161,52,51,102,174,127,190,445,	0,325,5269,6494,6756,7404,7665,8676,8943,
#Partially deleted in new
chr16	30075999	30083805	chr16:30075999-30083805	0	+	30075999	30075999	8553170	6	101,161,52,51,102,412,	0,315,5259,6484,6746,7394,
#Partially deleted in new
chr16	30076000	30083467	chr16:30076000-30083467	0	+	30076000	30076000	8553170	5	94,161,52,51,722,	0,314,5258,6483,6745,
#Partially deleted in new
chr16	30076004	30083780	chr16:30076004-30083780	0	+	30076377	30081272	789624	7	90,161,111,51,102,174,126,	0,310,5195,6479,6741,7389,7650,
#Partially deleted in new
chr16	30076006	30085347	chr16:30076006-30085347	0	+	30076006	30076006	8553170	8	88,161,52,51,102,388,190,415,	0,308,5252,6477,6739,7387,8659,8926,
#Partially deleted in new
chr16	30076006	30083567	chr16:30076006-30083567	0	+	30076006	30076006	8553170	4	88,161,51,822,	0,308,6477,6739,
#Partially deleted in new
chr16	30076016	30085371	chr16:30076016-30085371	0	+	30076377	30082907	789624	9	78,161,52,51,218,174,127,190,439,	0,298,5242,6467,6729,7377,7638,8649,8916,
#Partially deleted in new
chr16	30076017	30085041	chr16:30076017-30085041	0	+	30076377	30085041	789624	8	77,161,52,51,174,127,190,109,	0,297,5241,6466,7376,7637,8648,8915,
#Partially deleted in new
chr16	30076022	30085356	chr16:30076022-30085356	1	+	30076377	30082749	789624	8	72,161,51,102,174,127,190,424,	0,292,6461,6723,7371,7632,8643,8910,
#Partially deleted in new
chr16	30076023	30082984	chr16:30076023-30082984	0	+	30076023	30076023	8553170	3	452,51,239,	0,6460,6722,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	30076028	30081689	chr16:30076028-30081689	0	+	30076028	30076028	8553170	3	66,161,431,	0,286,5230,
#Partially deleted in new
chr16	30076031	30084773	chr16:30076031-30084773	0	+	30076377	30084773	789624	7	69,161,52,51,174,127,108,	0,283,5227,6452,7362,7623,8634,
#Partially deleted in new
chr16	30076224	30085318	chr16:30076224-30085318	1	+	30076377	30085062	789624	8	251,52,51,102,174,127,190,386,	0,5034,6259,6521,7169,7430,8441,8708,
#Partially deleted in new
chr16	30085792	30091884	chr16:30085792-30091884	3	-	30086224	30091193	789624	9	646,184,74,71,147,268,235,166,12,	0,719,985,2752,2900,3150,4965,5283,6080,
#Partially deleted in new
chr16	30085795	30091249	chr16:30085795-30091249	1	-	30086224	30091193	789624	8	643,184,74,71,147,268,235,174,	0,716,982,2749,2897,3147,4962,5280,
#Partially deleted in new
chr16	30085795	30091249	chr16:30085795-30091249	1	-	30086224	30091193	789624	8	643,184,105,25,162,268,235,174,	0,716,982,2854,2882,3147,4962,5280,
#Partially deleted in new
chr16	30086034	30091213	chr16:30086034-30091213	0	-	30088495	30091193	789624	7	404,184,167,147,268,235,138,	0,477,2414,2658,2908,4723,5041,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	30087915	30091887	chr16:30087915-30091887	1	-	30088495	30091193	789624	5	700,147,268,235,812,	0,777,1027,2842,3160,
#Partially deleted in new
chr16	30092313	30096200	chr16:30092313-30096200	1	-	30092709	30095482	789624	4	486,109,44,949,	0,2475,2789,2938,
#Partially deleted in new
chr16	30092313	30096205	chr16:30092313-30096205	0	-	30092313	30092313	8553170	5	486,142,44,84,109,	0,2475,2789,2938,3783,
#Partially deleted in new
chr16	30092313	30094880	chr16:30092313-30094880	0	-	30094472	30094880	789624	3	486,91,92,	0,2071,2475,
#Partially deleted in new
chr16	30092339	30096170	chr16:30092339-30096170	1	-	30092732	30095368	789624	4	460,44,183,74,	0,2763,2912,3757,
#Partially deleted in new
chr16	30092348	30096244	chr16:30092348-30096244	1	-	30092709	30095368	789624	5	451,109,44,183,148,	0,2440,2754,2903,3748,
#Partially deleted in new
chr16	30092576	30096915	chr16:30092576-30096915	3	-	30092709	30095368	789624	5	223,109,44,183,171,	0,2212,2526,2675,4168,
#Partially deleted in new
chr16	30092636	30096912	chr16:30092636-30096912	1	-	30092709	30095368	789624	5	163,109,44,183,297,	0,2152,2466,2615,3979,
#Partially deleted in new
chr16	30092760	30096195	chr16:30092760-30096195	0	-	30092760	30095368	789624	5	39,109,44,183,200,	0,2028,2342,2491,3235,
#Partially deleted in new
chr16	30092777	30096208	chr16:30092777-30096208	0	-	30092777	30092777	8553170	5	22,109,44,84,112,	0,2011,2325,2474,3319,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30093744	30095588	chr16:30093744-30095588	0	-	30093744	30093744	8553170	2	1402,337,	0,1507,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	30093761	30096012	chr16:30093761-30096012	1	-	30094758	30095482	789624	3	1136,44,761,	0,1341,1490,
#Deleted in new
chr16	30094852	30096241	chr16:30094852-30096241	0	-	30095098	30095368	789624	4	45,149,183,145,	0,145,399,1244,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30096429	30104116	chr16:30096429-30104116	3	+	30096429	30096429	8553170	2	990,660,	0,7027,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	30104809	30113537	chr16:30104809-30113537	0	-	30104809	30104809	8553170	9	200,52,60,134,90,119,46,407,198,	0,3403,3563,6578,7322,7496,7713,7848,8530,
#Partially deleted in new
chr16	30104809	30113856	chr16:30104809-30113856	3	-	30104871	30113478	789624	10	200,52,60,134,90,119,46,136,43,517,	0,3403,3563,6578,7322,7496,7713,7848,8212,8530,
#Partially deleted in new
chr16	30104809	30108498	chr16:30104809-30108498	0	-	30104809	30104809	8553170	2	200,286,	0,3403,
#Partially deleted in new
chr16	30104814	30108432	chr16:30104814-30108432	0	-	30108200	30108432	789624	3	195,144,60,	0,3306,3558,
#Partially deleted in new
chr16	30104843	30111396	chr16:30104843-30111396	0	-	30104936	30111396	789624	3	166,60,9,	0,3529,6544,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30107674	30110541	chr16:30107674-30110541	3	+	30107674	30107674	8553170	2	502,51,	0,2816,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	30110894	30111955	chr16:30110894-30111955	3	+	30110894	30110894	8553170	1	1061,	0,
#Partially deleted in new
chr16	30114104	30123294	chr16:30114104-30123294	3	-	30116667	30123209	0	9	604,155,110,132,115,117,190,183,255,	0,2531,2789,3049,3565,3942,4244,7719,8935,
#Partially deleted in new
chr16	30114104	30123294	chr16:30114104-30123294	0	-	30116976	30123209	789624	9	604,155,110,149,115,117,190,183,255,	0,2531,2789,3032,3565,3942,4244,7719,8935,
#Partially deleted in new
chr16	30114105	30123309	chr16:30114105-30123309	1	-	30116667	30123209	0	8	603,155,110,115,117,190,183,270,	0,2530,2788,3564,3941,4243,7718,8934,
#Partially deleted in new
chr16	30114105	30122968	chr16:30114105-30122968	1	-	30116667	30121834	789624	8	603,155,110,132,115,117,190,1145,	0,2530,2788,3048,3564,3941,4243,7718,
#Partially deleted in new
chr16	30114119	30123227	chr16:30114119-30123227	0	-	30116726	30123209	789624	9	589,151,53,132,115,117,190,183,188,	0,2516,2831,3034,3550,3927,4229,7704,8920,
#Partially deleted in new
chr16	30114201	30116867	chr16:30114201-30116867	0	-	30114201	30114201	8553170	2	507,232,	0,2434,
#Partially deleted in new
chr16	30114545	30117286	chr16:30114545-30117286	0	-	30116667	30117286	789624	5	163,51,155,110,133,	0,1049,2090,2348,2608,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30114615	30115999	chr16:30114615-30115999	0	-	30114615	30114615	8553170	2	93,405,	0,979,
#Partially deleted in new
chr16	30116634	30123150	chr16:30116634-30123150	1	-	30116667	30123122	789624	7	156,110,132,115,190,183,111,	0,259,519,1035,1714,5189,6405,
#Deleted in new
chr16	30116634	30117105	chr16:30116634-30117105	0	-	30116634	30116634	8553170	2	156,212,	0,259,
#Partially deleted in new
chr16	30116667	30123209	chr16:30116667-30123209	1	-	30116667	30123209	0	7	123,110,115,117,190,183,170,	0,226,1002,1379,1681,5156,6372,
#Partially deleted in new
chr16	30116688	30122990	chr16:30116688-30122990	0	-	30116688	30117733	789624	8	102,110,132,115,65,190,183,64,	0,205,465,981,1410,1660,5135,6238,
#Partially deleted in new
chr16	30116836	30123209	chr16:30116836-30123209	1	-	30116836	30123209	0	7	167,132,115,117,190,183,170,	0,317,833,1210,1512,4987,6203,
#Partially deleted in new
chr16	30117897	30123105	chr16:30117897-30123105	0	-	30117897	30117897	8553170	4	266,190,216,66,	0,451,3926,5142,
#Partially deleted in new
chr16	30118102	30123506	chr16:30118102-30123506	0	-	30118102	30121834	789624	4	61,190,183,31,	0,246,3721,5373,
#Deleted in new
chr16	30182826	30187494	chr16:30182826-30187494	0	+	30185209	30187494	789624	6	187,199,123,130,185,113,	0,2382,3771,3989,4212,4555,
#Deleted in new
chr16	30182986	30187133	chr16:30182986-30187133	0	+	30183026	30187133	789624	5	147,199,123,130,95,	0,2222,3611,3829,4052,
#Deleted in new
chr16	30183421	30189076	chr16:30183421-30189076	3	+	30185209	30188964	789624	11	304,199,123,130,185,120,105,146,58,216,217,	0,1787,3176,3394,3617,3960,4303,4520,4770,4939,5438,
#Deleted in new
chr16	30183504	30184523	chr16:30183504-30184523	3	-	30183504	30183504	8553170	3	267,183,20,	0,644,999,
#Deleted in new
chr16	30183513	30184421	chr16:30183513-30184421	0	+	30183513	30183513	8553170	2	120,70,	0,838,
#Deleted in new
chr16	30183535	30184563	chr16:30183535-30184563	0	-	30183535	30183535	8553170	2	236,60,	0,968,
#Deleted in new
chr16	30183604	30189075	chr16:30183604-30189075	0	+	30183604	30183604	8553170	10	121,1512,130,185,120,105,146,58,216,216,	0,1604,3211,3434,3777,4120,4337,4587,4756,5255,
#Deleted in new
chr16	30183608	30186118	chr16:30183608-30186118	0	+	30183608	30183608	8553170	3	117,199,261,	0,1600,2249,
#Deleted in new
chr16	30183608	30187132	chr16:30183608-30187132	0	+	30183608	30183608	8553170	4	117,199,123,317,	0,1600,2989,3207,
#Deleted in new
chr16	30183608	30188964	chr16:30183608-30188964	1	+	30185209	30188964	789624	12	117,118,199,123,130,185,120,105,146,58,216,105,	0,617,1600,2989,3207,3430,3773,4116,4333,4583,4752,5251,
#Deleted in new
chr16	30183616	30187167	chr16:30183616-30187167	0	+	30183616	30183616	8553170	4	109,199,123,129,	0,1592,2981,3422,
#Deleted in new
chr16	30183618	30189034	chr16:30183618-30189034	1	+	30185209	30188964	789624	10	107,199,123,130,185,120,105,146,58,175,	0,1590,2979,3197,3420,3763,4106,4323,4573,5241,
#Deleted in new
chr16	30183620	30187829	chr16:30183620-30187829	0	+	30185209	30187829	789624	6	105,199,130,185,120,105,	0,1588,3195,3418,3761,4104,
#Deleted in new
chr16	30183824	30186938	chr16:30183824-30186938	0	+	30185209	30186938	789624	4	137,199,123,123,	0,1384,2773,2991,
#Deleted in new
chr16	30184061	30184957	chr16:30184061-30184957	1	-	30184061	30184061	8553170	3	358,36,126,	0,442,770,
#Deleted in new
chr16	30184217	30185648	chr16:30184217-30185648	0	+	30184217	30184217	8553170	2	126,440,	0,991,
#Deleted in new
chr16	30184747	30187083	chr16:30184747-30187083	0	+	30185209	30187083	789624	5	217,199,123,130,45,	0,461,1850,2068,2291,
#Deleted in new
chr16	30185931	30189075	chr16:30185931-30189075	0	+	30185931	30185931	8553170	3	789,408,1694,	0,884,1450,
#Deleted in new
chr16	30186681	30189075	chr16:30186681-30189075	0	+	30186681	30186681	8553170	2	542,1694,	0,700,
#Deleted in new
chr16	30188074	30188572	chr16:30188074-30188572	0	+	30188074	30188074	8553170	2	175,212,	0,286,
#Deleted in new
chr16	30192933	30193697	chr16:30192933-30193697	0	-	30193353	30193697	789624	2	522,165,	0,599,
#Deleted in new
chr16	30192933	30193666	chr16:30192933-30193666	0	-	30193023	30193666	789624	3	141,60,134,	0,424,599,
#Deleted in new
chr16	30192934	30194306	chr16:30192934-30194306	3	-	30192974	30193793	789624	3	140,98,774,	0,423,598,
#Deleted in new
chr16	30192934	30193524	chr16:30192934-30193524	0	-	30192934	30192934	789624	2	140,167,	0,423,
#Partially deleted in new
chr16	30193886	30197531	chr16:30193886-30197531	0	+	30193886	30193886	8553170	5	905,342,128,88,95,	0,999,3087,3383,3550,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	30193891	30204310	chr16:30193891-30204310	0	+	30193891	30193891	8553170	10	1336,128,88,152,126,98,127,95,181,503,	0,3082,3378,6833,7089,7304,8798,9020,9613,9916,
#Partially deleted in new
chr16	30193903	30197561	chr16:30193903-30197561	1	+	30194084	30197466	789624	5	369,52,128,88,125,	0,836,3070,3366,3533,
#Partially deleted in new
chr16	30193916	30197561	chr16:30193916-30197561	3	+	30194084	30197466	789624	6	356,52,342,128,88,125,	0,823,969,3057,3353,3520,
#Partially deleted in new
chr16	30193948	30197561	chr16:30193948-30197561	0	+	30194084	30197275	789624	4	324,52,88,125,	0,791,3321,3488,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	30194432	30204306	chr16:30194432-30204306	3	+	30194432	30194432	789624	11	359,342,128,88,152,126,98,127,95,181,499,	0,453,2541,2837,6292,6548,6763,8257,8479,9072,9375,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	30194444	30204306	chr16:30194444-30204306	0	+	30194444	30194444	8553170	8	347,128,88,152,126,317,181,499,	0,2529,2825,6280,6536,8245,9060,9363,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	30194446	30204118	chr16:30194446-30204118	0	+	30194446	30194446	8553170	10	131,52,342,128,88,152,126,98,996,311,	0,293,439,2527,2823,6278,6534,6749,8243,9361,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	30194498	30204310	chr16:30194498-30204310	0	+	30194498	30194498	8553170	10	729,128,88,152,126,98,127,95,181,503,	0,2475,2771,6226,6482,6697,8191,8413,9006,9309,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	30195789	30204008	chr16:30195789-30204008	0	+	30195789	30195789	8553170	9	1312,88,152,126,98,127,95,181,201,	0,1480,4935,5191,5406,6900,7122,7715,8018,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30196311	30197530	chr16:30196311-30197530	0	+	30196311	30196311	8553170	2	1046,94,	0,1125,
#Deleted in new
chr16	30196657	30197403	chr16:30196657-30197403	0	+	30196657	30196657	8553170	2	444,134,	0,612,
#Partially deleted in new
chr16	30199227	30203422	chr16:30199227-30203422	0	+	30199227	30199227	8553170	5	100,152,126,98,733,	0,1497,1753,1968,3462,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	30199230	30204028	chr16:30199230-30204028	3	+	30200728	30203920	0	8	97,152,126,98,127,95,181,221,	0,1494,1750,1965,3459,3681,4274,4577,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	30199859	30204310	chr16:30199859-30204310	1	+	30200728	30203920	0	8	44,152,126,98,127,95,181,503,	0,865,1121,1336,2830,3052,3645,3948,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30200404	30201262	chr16:30200404-30201262	0	+	30200404	30200404	8553170	2	702,67,	0,791,
#Partially deleted in new
chr16	30200728	30203920	chr16:30200728-30203920	1	+	30200728	30203920	0	7	148,126,98,127,95,199,113,	0,252,467,1961,2183,2758,3079,
#Partially deleted in new
chr16	30201056	30203680	chr16:30201056-30203680	0	+	30201056	30203680	789624	5	50,98,127,95,35,	0,139,1633,1855,2589,
#Partially deleted in new
chr16	30201060	30203077	chr16:30201060-30203077	0	+	30201060	30201060	8553170	4	46,98,127,166,	0,135,1629,1851,
#Partially deleted in new
chr16	30201071	30203300	chr16:30201071-30203300	0	+	30201071	30201071	8553170	2	222,611,	0,1618,
#Partially deleted in new
chr16	30201072	30203959	chr16:30201072-30203959	0	+	30201072	30201072	8553170	5	34,98,317,181,152,	0,123,1617,2432,2735,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	30204315	30207182	chr16:30204315-30207182	7	-	30204315	30204315	16724991	5	371,64,130,976,152,	0,511,645,1609,2715,
#Partially deleted in new
chr16	30204483	30206044	chr16:30204483-30206044	4	-	30204483	30204483	16724991	4	172,147,130,120,	0,260,477,1441,
#Partially deleted in new
chr16	30204570	30205090	chr16:30204570-30205090	5	-	30204570	30204570	16724991	3	116,146,130,	0,174,390,
#Partially deleted in new
chr16	30204721	30206162	chr16:30204721-30206162	4	-	30204721	30204721	16724991	3	134,130,238,	0,239,1203,
#Partially deleted in new
chr16	30204722	30205455	chr16:30204722-30205455	4	-	30204722	30204722	16724991	2	133,495,	0,238,
#Partially deleted in new
chr16	30205417	30206614	chr16:30205417-30206614	7	+	30205417	30205417	16724991	2	183,492,	0,705,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	30206509	30206927	chr16:30206509-30206927	5	+	30206509	30206509	16724991	1	418,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30206875	30209071	chr16:30206875-30209071	5	-	30206875	30206875	16724991	2	25,544,	0,1652,
#Partially deleted in new
chr16	30214408	30214699	chr16:30214408-30214699	7	+	30214408	30214408	16724991	2	30,180,	0,111,
#Partially deleted in new
chr16	30218219	30221930	chr16:30218219-30221930	7	+	30218219	30218219	16724991	2	152,106,	0,3605,
#Partially deleted in new
chr16	30222936	30245801	chr16:30222936-30245801	3	-	30223028	30245573	789624	8	2867,36,61,196,100,129,158,37,	0,4227,4372,8503,8811,12514,22517,22828,
#Deleted in new
chr16	30222981	30225829	chr16:30222981-30225829	1	-	30223028	30225797	789624	2	493,849,	0,1999,
#Partially deleted in new
chr16	30225602	30235516	chr16:30225602-30235516	0	-	30231629	30235516	789624	7	201,36,61,102,231,100,66,	0,1561,1706,2776,5837,6145,9848,
#Partially deleted in new
chr16	30226547	30239420	chr16:30226547-30239420	1	-	30226956	30239366	789624	6	652,61,145,100,129,129,	0,761,4892,5200,8903,12744,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	30235447	30254510	chr16:30235447-30254510	0	-	30235447	30245573	789624	4	132,158,79,201,	0,10006,10327,18862,
#Partially deleted in new
chr16	30235498	30245829	chr16:30235498-30245829	0	-	30240048	30245573	789624	3	81,86,376,	0,4467,9955,
#Partially deleted in new
chr16	30235519	30245877	chr16:30235519-30245877	0	-	30240212	30245573	789624	4	60,277,158,24,	0,4446,9934,10334,
#Partially deleted in new
chr16	30267552	30335054	chr16:30267552-30335054	7	-	30267552	30267552	16724991	29	120,160,148,110,202,143,155,165,197,200,141,102,88,119,159,131,272,102,225,173,98,73,126,214,59,137,156,164,80,	0,849,1383,2503,5476,5826,8460,9711,10044,10628,11380,12140,12331,12890,13714,14022,17633,18614,21008,23650,25546,26562,27013,30824,32316,33669,37502,38237,67422,
#Partially deleted in new
chr16	30270064	30279970	chr16:30270064-30279970	4	-	30270064	30270064	16724991	9	101,202,143,155,123,197,200,141,278,	0,2964,3314,5948,7199,7532,8116,8868,9628,
#Partially deleted in new
chr16	30285022	30335374	chr16:30285022-30335374	5	-	30285022	30285022	16724991	13	435,102,225,173,98,73,126,214,59,137,156,164,400,	0,1144,3538,6180,8076,9092,9543,13354,14846,16199,20032,20767,49952,
#Partially deleted in new
chr16	30336399	30343336	chr16:30336399-30343336	7	+	30336399	30336399	16724991	2	139,198,	0,6739,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	30350765	30355361	chr16:30350765-30355361	3	-	30352984	30354681	0	7	2330,107,433,158,139,104,150,	0,2415,2602,3135,3418,3838,4446,
#Deleted in new
chr16	30352846	30354934	chr16:30352846-30354934	1	-	30352984	30354681	0	6	249,107,433,158,139,331,	0,334,521,1054,1337,1757,
#Deleted in new
chr16	30353965	30355291	chr16:30353965-30355291	0	-	30353965	30353965	8553170	3	357,104,80,	0,638,1246,
#Deleted in new
chr16	30355440	30357104	chr16:30355440-30357104	3	+	30355440	30355440	8553170	2	180,812,	0,852,
#Partially deleted in new
chr16	30357101	30370264	chr16:30357101-30370264	3	-	30357943	30370183	789624	9	1472,155,190,66,115,107,108,100,1037,	0,1561,2070,2436,2625,7798,8003,8393,12126,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30357101	30359674	chr16:30357101-30359674	0	-	30357101	30357101	8553170	2	1472,1012,	0,1561,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	30357106	30368007	chr16:30357106-30368007	0	-	30357106	30357106	8553170	7	1467,155,190,66,115,108,2513,	0,1556,2065,2431,2620,7998,8388,
#Partially deleted in new
chr16	30358093	30365212	chr16:30358093-30365212	0	-	30358569	30365212	789624	6	480,155,66,115,107,108,	0,569,1444,1633,6806,7011,
#Partially deleted in new
chr16	30358775	30360176	chr16:30358775-30360176	0	-	30358775	30358775	8553170	3	42,66,450,	0,762,951,
#Deleted in new
chr16	30359183	30360043	chr16:30359183-30360043	0	-	30359183	30359183	8553170	3	178,66,317,	0,354,543,
#Partially deleted in new
chr16	30359749	30365881	chr16:30359749-30365881	0	-	30359749	30359749	8553170	4	92,107,108,387,	0,5150,5355,5745,
#Deleted in new
chr16	30359824	30360336	chr16:30359824-30360336	3	+	30359824	30359824	8553170	1	512,	0,
#Partially deleted in new
chr16	30370933	30376698	chr16:30370933-30376698	0	+	30374857	30376698	789624	7	71,139,39,93,76,105,79,	0,1944,3888,4886,5211,5489,5686,
#Partially deleted in new
chr16	30372317	30377702	chr16:30372317-30377702	0	+	30374857	30377702	789624	8	43,139,39,93,76,105,79,49,	0,560,2504,3502,3827,4105,4302,5336,
#Partially deleted in new
chr16	30374776	30377991	chr16:30374776-30377991	3	+	30374857	30377900	789624	7	84,93,76,105,79,49,196,	0,1043,1368,1646,1843,2877,3019,
#Partially deleted in new
chr16	30375819	30377904	chr16:30375819-30377904	0	+	30375819	30377900	789624	5	93,76,105,79,251,	0,325,603,800,1834,
#Deleted in new
chr16	30377562	30377991	chr16:30377562-30377991	0	+	30377562	30377562	8553170	2	140,196,	0,233,
#Partially deleted in new
chr16	30378105	30395455	chr16:30378105-30395455	0	+	30378105	30378105	8553170	2	104,326,	0,17024,
#Partially deleted in new
chr16	30378132	30382850	chr16:30378132-30382850	3	-	30378433	30382804	789624	12	388,91,166,100,102,118,135,124,87,91,74,116,	0,477,885,1302,1799,2994,3206,3627,3960,4142,4392,4602,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	30378136	30382813	chr16:30378136-30382813	0	-	30378136	30378136	8553170	10	384,91,166,100,1542,124,87,91,74,79,	0,473,881,1298,1795,3623,3956,4138,4388,4598,
#Partially deleted in new
chr16	30378154	30382547	chr16:30378154-30382547	0	-	30381456	30382542	789624	10	366,91,166,100,102,118,135,87,91,23,	0,455,863,1280,1777,2972,3184,3938,4120,4370,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	30378183	30382370	chr16:30378183-30382370	0	-	30378183	30378183	8553170	9	337,91,166,100,268,347,124,87,96,	0,426,834,1251,1582,2943,3576,3909,4091,
#Partially deleted in new
chr16	30378311	30397691	chr16:30378311-30397691	0	+	30395794	30397691	789624	3	99,94,362,	0,17468,19018,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30378313	30399927	chr16:30378313-30399927	1	+	30397619	30399107	789624	2	97,2598,	0,19016,
#Partially deleted in new
chr16	30378609	30382431	chr16:30378609-30382431	0	-	30378609	30378609	8553170	9	91,166,100,102,118,135,124,87,157,	0,408,825,1322,2517,2729,3150,3483,3665,
#Partially deleted in new
chr16	30379488	30382813	chr16:30379488-30382813	0	-	30382294	30382804	789624	8	46,102,118,135,124,87,91,79,	0,443,1638,1850,2271,2604,2786,3246,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	30379762	30380110	chr16:30379762-30380110	3	-	30379762	30379762	8553170	1	348,	0,
#Deleted in new
chr16	30381494	30382577	chr16:30381494-30382577	0	-	30381494	30381494	8553170	4	389,87,91,53,	0,598,780,1030,
#Deleted in new
chr16	30381842	30382813	chr16:30381842-30382813	0	-	30381842	30381842	8553170	4	41,273,74,79,	0,250,682,892,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30382751	30395991	chr16:30382751-30395991	0	-	30382751	30382751	8553170	2	263,324,	0,12916,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30382821	30394903	chr16:30382821-30394903	0	-	30382821	30382821	8553170	2	193,358,	0,11724,
#Partially deleted in new
chr16	30395111	30397680	chr16:30395111-30397680	0	+	30395794	30397680	789624	3	467,94,351,	0,668,2218,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	30395111	30400107	chr16:30395111-30400107	3	+	30395794	30399107	789624	3	467,94,2778,	0,668,2218,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30395418	30400108	chr16:30395418-30400108	1	+	30395794	30399107	789624	2	455,2779,	0,1911,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	30407296	30419407	chr16:30407296-30419407	3	+	30408053	30418367	789624	3	368,150,1853,	0,748,10258,
#Partially deleted in new
chr16	30407413	30418594	chr16:30407413-30418594	1	+	30408053	30418367	789624	3	251,163,1040,	0,618,10141,
#Partially deleted in new
chr16	30407628	30431108	chr16:30407628-30431108	1	+	30408053	30428897	789624	3	36,150,2229,	0,416,21251,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30408030	30414609	chr16:30408030-30414609	1	+	30408053	30413634	789624	2	164,1023,	0,5556,
#Partially deleted in new
chr16	30419624	30419759	chr16:30419624-30419759	3	-	30419624	30419624	8553170	1	135,	0,
#Partially deleted in new
chr16	30423618	30430075	chr16:30423618-30430075	3	-	30424232	30429980	789624	3	915,111,196,	0,5438,6261,
#Partially deleted in new
chr16	30423697	30430030	chr16:30423697-30430030	1	-	30424232	30429980	789624	2	726,75,	0,6258,
#Partially deleted in new
chr16	30423913	30429289	chr16:30423913-30429289	1	-	30424232	30424382	789624	2	620,233,	0,5143,
#Partially deleted in new
chr16	30423978	30429800	chr16:30423978-30429800	1	-	30424232	30424382	789624	3	555,111,212,	0,5078,5610,
#Partially deleted in new
chr16	30424033	30429992	chr16:30424033-30429992	1	-	30424232	30424382	789624	3	500,111,138,	0,5023,5821,
#Deleted in new
chr16	30443630	30446181	chr16:30443630-30446181	3	-	30444380	30445727	789624	1	2551,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	30453996	30454097	chr16:30453996-30454097	3	-	30453996	30453996	8553170	1	101,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	30471586	30471703	chr16:30471586-30471703	3	+	30471586	30471586	8553170	1	117,	0,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr16	30472657	30523185	chr16:30472657-30523185	3	+	30472837	30521665	0	31	241,103,95,68,118,131,146,133,151,74,133,152,138,198,131,161,152,90,57,74,142,111,80,87,76,114,57,99,96,111,1694,	0,1538,2648,2855,6433,6673,8781,11169,11455,16424,16596,21554,22055,23439,23778,26416,26680,31517,32586,32731,34057,37703,38223,38392,41113,44315,44991,45139,45966,47199,48834,
#Partially deleted in new
chr16	30472718	30474607	chr16:30472718-30474607	0	+	30472837	30474176	789624	3	180,334,47,	0,1246,1842,
#Partially deleted in new
chr16	30472721	30475402	chr16:30472721-30475402	0	+	30472721	30472721	8553170	4	177,119,103,97,	0,1243,1474,2584,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr16	30472728	30522968	chr16:30472728-30522968	1	+	30472837	30521665	0	29	170,103,95,68,146,133,151,74,133,152,138,198,131,161,152,90,54,74,142,111,80,87,76,114,57,99,96,111,1477,	0,1467,2577,2784,8710,11098,11384,16353,16525,21483,21984,23368,23707,26345,26609,31446,32518,32660,33986,37632,38152,38321,41042,44244,44920,45068,45895,47128,48763,
#Partially deleted in new
chr16	30472744	30510414	chr16:30472744-30510414	0	+	30472837	30506774	789624	5	154,92,117,142,54,	0,1451,26628,33970,37616,
#Partially deleted in new
chr16	30472745	30483964	chr16:30472745-30483964	0	+	30472837	30481482	789624	7	153,103,95,68,118,146,138,	0,1450,2560,2767,6345,8693,11081,
#Partially deleted in new
chr16	30472745	30483964	chr16:30472745-30483964	0	+	30472745	30472745	8553170	5	153,103,95,68,138,	0,1450,2560,2767,11081,
#Partially deleted in new
chr16	30472745	30479190	chr16:30472745-30479190	0	+	30472837	30475292	789624	5	153,103,112,68,100,	0,1450,2543,2767,6345,
#Partially deleted in new
chr16	30472749	30483964	chr16:30472749-30483964	0	+	30472837	30483964	789624	6	149,103,95,68,146,138,	0,1446,2556,2763,8689,11077,
#Partially deleted in new
chr16	30472750	30521779	chr16:30472750-30521779	1	+	30472837	30521665	789624	13	148,92,28,152,68,87,76,114,57,99,96,111,288,	0,1445,26456,26587,38142,38299,41020,44222,44898,45046,45873,47106,48741,
#Partially deleted in new
chr16	30474000	30479174	chr16:30474000-30479174	0	+	30475541	30479174	789624	4	298,95,68,84,	0,1305,1512,5090,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	30477179	30489353	chr16:30477179-30489353	3	-	30477179	30477179	8553170	3	195,209,295,	0,2062,11879,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30480587	30481346	chr16:30480587-30481346	3	-	30480587	30480587	8553170	2	402,126,	0,633,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	30483134	30483195	chr16:30483134-30483195	3	-	30483134	30483134	8553170	1	61,	0,
#Partially deleted in new
chr16	30483890	30489304	chr16:30483890-30489304	0	+	30483890	30483890	8553170	3	69,151,223,	0,222,5191,
#Partially deleted in new
chr16	30488882	30496201	chr16:30488882-30496201	0	+	30488882	30488882	8553170	5	106,74,152,138,105,	0,199,5329,5830,7214,
#Partially deleted in new
chr16	30488999	30494856	chr16:30488999-30494856	0	+	30488999	30488999	8553170	4	156,133,152,144,	0,254,5212,5713,
#Partially deleted in new
chr16	30496431	30504219	chr16:30496431-30504219	0	+	30496431	30496431	8553170	3	135,369,45,	0,2689,7743,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30498765	30499554	chr16:30498765-30499554	3	-	30498765	30498765	8553170	2	386,191,	0,598,
#Partially deleted in new
chr16	30499171	30510395	chr16:30499171-30510395	0	+	30499171	30499425	789624	7	63,117,90,54,74,142,35,	0,201,5003,6075,6217,7543,11189,
#Partially deleted in new
chr16	30503918	30504001	chr16:30503918-30504001	3	+	30503918	30503918	5263520	1	83,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	30504871	30506772	chr16:30504871-30506772	0	+	30504871	30504871	8553170	3	429,74,58,	0,517,1843,
#Partially deleted in new
chr16	30509358	30517070	chr16:30509358-30517070	0	+	30509358	30509358	8553170	6	85,111,80,87,76,98,	0,1002,1522,1691,4412,7614,
#Partially deleted in new
chr16	30519755	30522243	chr16:30519755-30522243	0	+	30519755	30519755	8553170	2	212,752,	0,1736,
#Deleted in new
chr16	30524000	30526589	chr16:30524000-30526589	3	-	30524516	30526413	789624	2	2051,264,	0,2325,
#Deleted in new
chr16	30524132	30526821	chr16:30524132-30526821	1	-	30524516	30526046	789624	2	1919,80,	0,2609,
#Partially deleted in new
chr16	30525922	30534852	chr16:30525922-30534852	3	-	30532498	30534679	789624	4	129,870,114,402,	0,6356,8274,8528,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	30526917	30528294	chr16:30526917-30528294	3	+	30526917	30526917	8553170	1	1377,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30530366	30535347	chr16:30530366-30535347	1	-	30533058	30534679	789624	2	2785,1151,	0,3830,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30530366	30534918	chr16:30530366-30534918	1	-	30533058	30534679	789624	2	2782,722,	0,3830,
#Partially deleted in new
chr16	30532305	30535004	chr16:30532305-30535004	3	-	30532498	30534679	789624	3	843,114,554,	0,1891,2145,
#Partially deleted in new
chr16	30534226	30558279	chr16:30534226-30558279	3	-	30534226	30558182	789624	2	84,293,	0,23760,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30534751	30537144	chr16:30534751-30537144	3	+	30534751	30534751	8553170	2	729,716,	0,1677,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30535110	30536199	chr16:30535110-30536199	0	+	30535110	30535110	8553170	2	370,382,	0,707,
#Partially deleted in new
chr16	30537201	30538231	chr16:30537201-30538231	7	-	30537201	30537201	16724991	2	251,472,	0,558,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	30553763	30558263	chr16:30553763-30558263	3	-	30555193	30558182	789624	3	2347,114,277,	0,3969,4223,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	30553763	30558498	chr16:30553763-30558498	1	-	30555193	30558182	789624	3	2344,114,512,	0,3969,4223,
#Partially deleted in new
chr16	30555637	30558211	chr16:30555637-30558211	0	-	30555637	30555637	8553170	2	470,479,	0,2095,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	30569345	30572734	chr16:30569345-30572734	3	-	30569915	30571629	789624	3	1091,114,1301,	0,1664,2088,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	30569671	30572734	chr16:30569671-30572734	1	-	30569915	30572275	789624	3	765,114,613,	0,1338,2450,
#Partially deleted in new
chr16	30569685	30571672	chr16:30569685-30571672	0	-	30569685	30569685	8553170	2	751,663,	0,1324,
#Partially deleted in new
chr16	30570177	30571527	chr16:30570177-30571527	0	-	30570177	30570177	8553170	2	259,303,	0,1047,
#Partially deleted in new
chr16	30570219	30571320	chr16:30570219-30571320	0	-	30570219	30571320	789624	3	217,114,96,	0,790,1005,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	30570733	30571652	chr16:30570733-30571652	1	-	30570917	30571629	789624	3	207,114,219,	0,276,700,
#Deleted in new
chr16	30570898	30571635	chr16:30570898-30571635	1	-	30570917	30571629	789624	2	42,202,	0,535,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	30572249	30582892	chr16:30572249-30582892	1	+	30572249	30572249	8553170	3	162,425,363,	0,9474,10280,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30572254	30583860	chr16:30572254-30583860	3	+	30572254	30572254	8553170	2	157,1331,	0,10275,
#Partially deleted in new
chr16	30573739	30582804	chr16:30573739-30582804	0	-	30582559	30582804	789624	3	152,53,294,	0,6055,8771,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	30578360	30585769	chr16:30578360-30585769	1	-	30582559	30585611	789624	4	1487,933,84,363,	0,4150,6806,7046,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	30580655	30585771	chr16:30580655-30585771	3	-	30582559	30585611	789624	3	2788,129,365,	0,4466,4751,
#Partially deleted in new
chr16	30583128	30585497	chr16:30583128-30585497	0	-	30585162	30585497	789624	3	315,129,122,	0,1993,2247,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30585906	30608593	chr16:30585906-30608593	3	+	30585906	30585906	8553170	2	188,294,	0,22393,
#Deleted in new
chr16	30587661	30587920	chr16:30587661-30587920	7	-	30587661	30587661	16724991	1	259,	0,
#Partially deleted in new
chr16	30602557	30610379	chr16:30602557-30610379	3	-	30604263	30610041	789624	3	2890,114,543,	0,6967,7279,
#Partially deleted in new
chr16	30604539	30610386	chr16:30604539-30610386	0	-	30604539	30604539	789624	3	908,114,185,	0,4985,5662,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	30604617	30623948	chr16:30604617-30623948	0	-	30604617	30604617	8553170	3	830,114,209,	0,4907,19122,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	30604617	30624012	chr16:30604617-30624012	0	-	30604617	30604617	8553170	4	830,114,195,273,	0,4907,5970,19122,
#Partially deleted in new
chr16	30604782	30609485	chr16:30604782-30609485	0	-	30604782	30604782	8553170	2	665,50,	0,4653,
#Partially deleted in new
chr16	30605046	30609828	chr16:30605046-30609828	0	-	30605046	30605046	789624	3	401,114,87,	0,4478,4695,
#Deleted in new
chr16	30615255	30615679	chr16:30615255-30615679	7	-	30615255	30615255	16724991	1	424,	0,
#Deleted in new
chr16	30624284	30624714	chr16:30624284-30624714	7	-	30624284	30624284	16724991	1	430,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	30626975	30627178	chr16:30626975-30627178	7	+	30626975	30626975	16724991	1	203,	0,
#Partially deleted in new
chr16	30650716	30652942	chr16:30650716-30652942	0	+	30650716	30650716	8553170	4	90,73,169,222,	0,879,1079,2004,
#Partially deleted in new
chr16	30650728	30654698	chr16:30650728-30654698	0	+	30651645	30654698	789624	8	78,73,169,122,190,44,110,70,	0,867,1067,1992,2185,2636,3501,3900,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	30650777	30652763	chr16:30650777-30652763	0	+	30650777	30650777	8553170	4	29,73,169,515,	0,818,1018,1471,
#Partially deleted in new
chr16	30650777	30652842	chr16:30650777-30652842	0	+	30651645	30652842	789624	5	29,135,73,169,122,	0,215,818,1018,1943,
#Partially deleted in new
chr16	30650779	30656412	chr16:30650779-30656412	0	+	30650779	30650779	8553170	10	27,369,383,44,110,586,53,92,72,381,	0,816,1941,2585,3450,3849,4588,4722,5088,5252,
#Partially deleted in new
chr16	30650866	30656440	chr16:30650866-30656440	3	+	30651645	30656311	789624	12	261,73,169,122,190,44,110,586,70,92,72,409,	0,729,929,1854,2047,2498,3363,3762,4484,4635,5001,5165,
#Partially deleted in new
chr16	30650935	30652886	chr16:30650935-30652886	0	+	30650935	30650935	8553170	4	192,73,169,166,	0,660,860,1785,
#Partially deleted in new
chr16	30650984	30656413	chr16:30650984-30656413	0	+	30650984	30650984	8553170	11	143,73,169,383,44,110,586,70,92,72,382,	0,611,811,1736,2380,3245,3644,4366,4517,4883,5047,
#Partially deleted in new
chr16	30651189	30656413	chr16:30651189-30656413	1	+	30651645	30656311	789624	11	479,169,122,190,44,110,586,70,92,72,382,	0,606,1531,1724,2175,3040,3439,4161,4312,4678,4842,
#Deleted in new
chr16	30654108	30655592	chr16:30654108-30655592	0	+	30654108	30654108	8553170	3	231,586,242,	0,520,1242,
#Deleted in new
chr16	30654820	30655948	chr16:30654820-30655948	0	+	30654820	30654820	8553170	4	177,70,92,81,	0,530,681,1047,
#Deleted in new
chr16	30655140	30656408	chr16:30655140-30656408	0	+	30655140	30655140	8553170	3	453,72,377,	0,727,891,
#Deleted in new
chr16	30655718	30656413	chr16:30655718-30656413	0	+	30655718	30655718	8553170	2	221,382,	0,313,
#Partially deleted in new
chr16	30658430	30670814	chr16:30658430-30670814	3	+	30659518	30669645	789624	18	1547,180,36,30,49,301,302,206,45,96,69,30,72,118,81,84,208,1746,	0,1832,2749,2873,3989,4128,5784,6284,6604,6875,7207,8081,8488,8889,9111,10129,10341,10638,
#Deleted in new
chr16	30659917	30660581	chr16:30659917-30660581	0	+	30659917	30659917	8553170	2	60,319,	0,345,
#Partially deleted in new
chr16	30659921	30670809	chr16:30659921-30670809	0	+	30659921	30666964	789624	10	56,180,49,301,72,118,81,84,208,1741,	0,341,2498,2637,6997,7398,7620,8638,8850,9147,
#Deleted in new
chr16	30659925	30662697	chr16:30659925-30662697	0	+	30659925	30659925	8553170	3	52,180,278,	0,337,2494,
#Partially deleted in new
chr16	30661321	30664516	chr16:30661321-30664516	0	+	30661321	30661321	8553170	5	12,49,301,61,302,	0,1098,1237,1720,2893,
#Deleted in new
chr16	30661977	30662621	chr16:30661977-30662621	0	+	30661977	30661977	8553170	2	491,63,	0,581,
#Partially deleted in new
chr16	30664456	30670810	chr16:30664456-30670810	1	+	30664917	30669645	789624	12	60,206,45,96,69,30,72,118,81,84,208,1742,	0,258,578,849,1181,2055,2462,2863,3085,4103,4315,4612,
#Partially deleted in new
chr16	30665974	30669254	chr16:30665974-30669254	0	+	30665974	30665974	8553170	7	567,72,118,81,84,208,186,	0,944,1345,1567,2585,2797,3094,
#Deleted in new
chr16	30667938	30670809	chr16:30667938-30670809	0	+	30667938	30667938	8553170	2	1041,1741,	0,1130,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	30675299	30675402	chr16:30675299-30675402	3	-	30675299	30675299	8553170	1	103,	0,
#Deleted in new
chr16	30697706	30698961	chr16:30697706-30698961	0	-	30697706	30697706	789624	2	225,81,	0,1174,
#Deleted in new
chr16	30697712	30699058	chr16:30697712-30699058	3	-	30697712	30697712	8553170	2	219,923,	0,423,
#Partially deleted in new
chr16	30698208	30704309	chr16:30698208-30704309	0	+	30700824	30704309	789624	4	253,74,263,246,	0,1699,2407,5855,
#Partially deleted in new
chr16	30699140	30741409	chr16:30699140-30741409	3	+	30700824	30739733	789624	34	102,74,263,252,186,141,223,278,94,90,174,323,178,137,170,193,137,187,170,266,288,165,186,267,1499,266,203,170,197,115,120,195,84,4361,	0,767,1475,4923,8042,8431,10372,10710,11613,11858,12430,12694,13121,13538,14067,14378,16925,17152,21021,21572,22048,22981,23422,23822,24443,29825,30229,34139,34461,34753,35355,37059,37400,37908,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	30701336	30701435	chr16:30701336-30701435	3	-	30701336	30701336	8553170	1	99,	0,
#Partially deleted in new
chr16	30704066	30745169	chr16:30704066-30745169	3	+	30704066	30739733	789624	31	249,186,141,223,278,94,90,174,323,178,137,170,193,137,187,170,266,165,267,1499,266,203,170,197,115,120,195,84,3659,168,1388,	0,3116,3505,5446,5784,6687,6932,7504,7768,8195,8612,9141,9452,11999,12226,16095,16646,18055,18896,19517,24899,25303,29213,29535,29827,30429,32133,32474,32982,37674,39715,
#Partially deleted in new
chr16	30707257	30739733	chr16:30707257-30739733	1	+	30707670	30739733	789624	29	111,141,223,278,94,90,174,323,178,137,170,193,137,187,170,266,288,165,267,1499,266,203,170,197,115,120,195,84,2685,	0,314,2255,2593,3496,3741,4313,4577,5004,5421,5950,6261,8808,9035,12904,13455,13931,14864,15705,16326,21708,22112,26022,26344,26636,27238,28942,29283,29791,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr16	30709895	30726262	chr16:30709895-30726262	0	+	30709895	30725157	789624	18	233,94,90,174,323,178,137,170,193,137,187,170,266,288,165,186,267,2679,	0,858,1103,1675,1939,2366,2783,3312,3623,6170,6397,10266,10817,11293,12226,12667,13067,13688,
#Deleted in new
chr16	30710536	30710665	chr16:30710536-30710665	3	+	30710536	30710536	789624	1	129,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30733949	30736263	chr16:30733949-30736263	0	+	30733949	30733949	8553170	2	666,64,	0,2250,
#Partially deleted in new
chr16	30740380	30744281	chr16:30740380-30744281	3	+	30741743	30743943	789624	3	327,168,500,	0,1360,3401,
#Partially deleted in new
chr16	30740666	30751381	chr16:30740666-30751381	3	+	30740666	30740666	8553170	5	41,168,285,113,276,	0,1074,7539,8136,10439,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	30748269	30761176	chr16:30748269-30761176	3	+	30748820	30757097	0	10	221,113,176,55,66,164,91,154,126,4373,	0,533,2836,3279,4962,5124,7912,8097,8320,8534,
#Partially deleted in new
chr16	30748292	30756483	chr16:30748292-30756483	0	+	30748820	30756483	789624	8	126,113,176,55,66,164,91,117,	0,510,2813,3256,4939,5101,7889,8074,
#Partially deleted in new
chr16	30748298	30760391	chr16:30748298-30760391	1	+	30748820	30760160	0	11	192,113,176,55,66,164,91,154,126,156,273,	0,504,2807,3250,4933,5095,7883,8068,8291,8505,11820,
#Partially deleted in new
chr16	30748401	30757365	chr16:30748401-30757365	0	+	30748401	30748401	8553170	7	89,113,498,66,164,126,562,	0,401,2704,4830,4992,8188,8402,
#Partially deleted in new
chr16	30748439	30757331	chr16:30748439-30757331	1	+	30748820	30757097	789624	10	51,113,176,55,66,164,91,166,126,528,	0,363,2666,3109,4792,4954,7742,7915,8150,8364,
#Partially deleted in new
chr16	30748442	30757334	chr16:30748442-30757334	0	+	30748442	30748442	8553170	9	48,113,498,66,164,91,154,126,531,	0,360,2663,4789,4951,7739,7924,8147,8361,
#Partially deleted in new
chr16	30748550	30756517	chr16:30748550-30756517	0	+	30748820	30756517	789624	7	365,176,55,66,164,91,151,	0,2555,2998,4681,4843,7631,7816,
#Partially deleted in new
chr16	30748582	30753553	chr16:30748582-30753553	0	+	30748820	30753233	789624	5	333,112,55,66,160,	0,2523,2966,4649,4811,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30748843	30751913	chr16:30748843-30751913	0	+	30748843	30748843	8553170	2	72,808,	0,2262,
#Partially deleted in new
chr16	30752493	30756429	chr16:30752493-30756429	0	+	30752493	30752493	8553170	4	804,164,91,75,	0,900,3688,3861,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	30753231	30755265	chr16:30753231-30755265	0	+	30753231	30754885	789624	3	66,164,391,	0,162,1643,
#Partially deleted in new
chr16	30757422	30760419	chr16:30757422-30760419	0	-	30759225	30760419	789624	4	232,70,117,136,	0,1755,1919,2861,
#Partially deleted in new
chr16	30757422	30762165	chr16:30757422-30762165	0	-	30757422	30757422	8553170	7	232,90,70,103,385,32,621,	0,1589,1755,1919,2861,3775,4122,
#Partially deleted in new
chr16	30757423	30761983	chr16:30757423-30761983	0	-	30757423	30757423	8553170	6	231,70,216,71,385,786,	0,1754,1918,2230,2860,3774,
#Partially deleted in new
chr16	30757424	30759724	chr16:30757424-30759724	0	-	30757475	30759724	789624	4	230,70,117,71,	0,1753,1917,2229,
#Partially deleted in new
chr16	30757430	30762221	chr16:30757430-30762221	0	-	30757430	30757430	8553170	8	224,90,70,117,71,170,63,1024,	0,1581,1747,1911,2223,2853,3175,3767,
#Partially deleted in new
chr16	30757434	30760559	chr16:30757434-30760559	0	-	30757434	30757434	8553170	2	220,276,	0,2849,
#Partially deleted in new
chr16	30757435	30762198	chr16:30757435-30762198	0	-	30757435	30757435	8553170	6	219,236,117,156,385,1001,	0,1576,1906,2218,2848,3762,
#Partially deleted in new
chr16	30757466	30761748	chr16:30757466-30761748	0	-	30757466	30757466	8553170	8	188,90,70,117,71,385,32,204,	0,1545,1711,1875,2187,2817,3731,4078,
#Partially deleted in new
chr16	30757466	30762079	chr16:30757466-30762079	1	-	30757475	30761748	789624	8	188,90,70,383,170,63,32,535,	0,1545,1711,1875,2817,3139,3731,4078,
#Partially deleted in new
chr16	30757466	30762710	chr16:30757466-30762710	3	-	30757475	30761748	789624	9	188,90,70,117,71,170,63,32,1166,	0,1545,1711,1875,2187,2817,3139,3731,4078,
#Partially deleted in new
chr16	30760036	30762078	chr16:30760036-30762078	1	-	30760218	30761748	789624	4	417,63,32,534,	0,569,1161,1508,
#Partially deleted in new
chr16	30760292	30762085	chr16:30760292-30762085	0	-	30761323	30761748	789624	3	376,138,541,	0,905,1252,
#Deleted in new
chr16	30761744	30763450	chr16:30761744-30763450	0	+	30762545	30763450	789624	4	307,203,168,33,	0,730,1373,1673,
#Partially deleted in new
chr16	30761996	30776307	chr16:30761996-30776307	3	+	30762545	30774114	789624	20	364,203,168,142,207,122,147,75,120,180,136,122,428,118,150,213,126,141,102,2370,	0,478,1121,1421,2182,2941,3184,3428,4166,4382,4744,5897,6106,6622,6841,7189,7478,9836,10092,11941,
#Deleted in new
chr16	30762288	30763505	chr16:30762288-30763505	0	+	30762545	30763505	789624	4	110,203,168,88,	0,186,829,1129,
#Partially deleted in new
chr16	30762321	30775215	chr16:30762321-30775215	1	+	30762545	30774114	789624	18	39,203,168,142,207,122,147,75,136,122,428,118,150,213,126,141,102,1278,	0,153,796,1096,1857,2616,2859,3103,4419,5572,5781,6297,6516,6864,7153,9511,9767,11616,
#Partially deleted in new
chr16	30762321	30775181	chr16:30762321-30775181	1	+	30762545	30774114	789624	19	39,203,168,142,207,122,147,75,180,136,122,428,118,150,213,126,141,102,1244,	0,153,796,1096,1857,2616,2859,3103,4057,4419,5572,5781,6297,6516,6864,7153,9511,9767,11616,
#Deleted in new
chr16	30762321	30766244	chr16:30762321-30766244	0	+	30764288	30766244	789624	6	39,121,122,147,75,82,	0,1943,2616,2859,3103,3841,
#Deleted in new
chr16	30762322	30763549	chr16:30762322-30763549	0	+	30762545	30763549	789624	4	38,143,168,132,	0,212,795,1095,
#Partially deleted in new
chr16	30762335	30776307	chr16:30762335-30776307	0	+	30762335	30762335	8553170	19	25,203,168,142,207,122,147,75,120,180,136,122,428,118,150,415,141,102,2370,	0,139,782,1082,1843,2602,2845,3089,3827,4043,4405,5558,5767,6283,6502,6850,9497,9753,11602,
#Deleted in new
chr16	30765000	30766785	chr16:30765000-30766785	0	+	30765000	30765000	8553170	5	59,147,75,120,407,	0,180,424,1162,1378,
#Deleted in new
chr16	30767676	30768531	chr16:30767676-30768531	0	+	30767676	30767676	8553170	2	339,429,	0,426,
#Partially deleted in new
chr16	30769338	30773982	chr16:30769338-30773982	0	+	30769338	30773919	789624	5	60,126,141,102,168,	0,136,2494,2750,4476,
#Deleted in new
chr16	30773531	30776033	chr16:30773531-30776033	3	-	30773531	30773531	8553170	1	2502,	0,
#Deleted in new
chr16	30774069	30775188	chr16:30774069-30775188	0	+	30774069	30774114	789624	2	116,875,	0,244,
#Deleted in new
chr16	30778448	30787202	chr16:30778448-30787202	3	-	30781717	30784482	789624	3	5806,106,175,	0,5961,8579,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	30816029	30816302	chr16:30816029-30816302	3	+	30816029	30816029	8553170	1	273,	0,
#Partially deleted in new
chr16	30821067	30822110	chr16:30821067-30822110	7	-	30821067	30821067	16724991	2	445,155,	0,888,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	30821337	30821884	chr16:30821337-30821884	3	+	30821337	30821337	8553170	1	547,	0,
#Partially deleted in new
chr16	30833625	30894302	chr16:30833625-30894302	1	-	30834947	30893944	789624	6	1523,86,162,109,79,450,	0,55234,58960,59214,59586,60227,
#Partially deleted in new
chr16	30834584	30894200	chr16:30834584-30894200	0	-	30888930	30893944	789624	5	564,86,129,79,348,	0,54275,58001,58627,59268,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	30851245	30893942	chr16:30851245-30893942	0	-	30851968	30893942	789624	6	1077,86,162,109,79,90,	0,37614,41340,41594,41966,42607,
#Partially deleted in new
chr16	30875221	30895079	chr16:30875221-30895079	3	+	30875221	30875221	789624	2	897,532,	0,19326,
#Deleted in new
chr16	30875265	30875323	chr16:30875265-30875323	3	-	30875265	30875265	5263520	1	58,	0,
#Partially deleted in new
chr16	30875460	30895080	chr16:30875460-30895080	1	+	30875460	30875460	789624	3	26,89,533,	0,569,19087,
#Partially deleted in new
chr16	30875765	30895216	chr16:30875765-30895216	3	-	30875765	30875765	8553170	2	268,293,	0,19158,
#Partially deleted in new
chr16	30875911	30895220	chr16:30875911-30895220	1	+	30875911	30875911	789624	3	207,245,673,	0,12802,18636,
#Partially deleted in new
chr16	30887794	30894960	chr16:30887794-30894960	3	-	30887864	30893944	789624	6	196,86,162,109,79,1108,	0,1065,4791,5045,5417,6058,
#Deleted in new
chr16	30893902	30893985	chr16:30893902-30893985	3	+	30893902	30893902	5263520	1	83,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	30896606	30903560	chr16:30896606-30903560	3	+	30896643	30902539	789624	3	62,119,1483,	0,2808,5471,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	30896637	30903547	chr16:30896637-30903547	1	+	30896643	30902539	789624	3	31,116,1470,	0,2780,5440,
#Partially deleted in new
chr16	30904347	30910208	chr16:30904347-30910208	7	-	30904347	30904347	16724991	3	451,137,16,	0,3136,5845,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	30919318	30923269	chr16:30919318-30923269	3	-	30919318	30919318	789624	1	3951,	0,
#Partially deleted in new
chr16	30923054	30925931	chr16:30923054-30925931	0	+	30925754	30925931	789624	2	98,201,	0,2676,
#Partially deleted in new
chr16	30923070	30948776	chr16:30923070-30948776	1	+	30930159	30947230	789624	11	82,163,144,87,219,164,512,164,162,219,1725,	0,2698,4237,4502,4674,5396,7002,19045,19304,23659,23981,
#Partially deleted in new
chr16	30924096	30948783	chr16:30924096-30948783	1	+	30925754	30947230	789624	11	363,201,144,87,219,162,512,164,162,219,1732,	0,1634,3211,3476,3648,4370,5976,18019,18278,22633,22955,
#Partially deleted in new
chr16	30924574	30948783	chr16:30924574-30948783	3	+	30924732	30947230	0	11	194,201,144,87,219,162,512,164,162,219,1732,	0,1156,2733,2998,3170,3892,5498,17541,17800,22155,22477,
#Partially deleted in new
chr16	30924574	30947449	chr16:30924574-30947449	1	+	30925754	30947230	789624	11	194,201,144,87,219,162,512,164,162,219,398,	0,1156,2733,2998,3170,3892,5498,17541,17800,22155,22477,
#Partially deleted in new
chr16	30925649	30948018	chr16:30925649-30948018	1	+	30925754	30947230	789624	9	282,144,87,33,512,164,162,219,967,	0,1658,1923,2817,4423,16466,16725,21080,21402,
#Partially deleted in new
chr16	30925891	30948783	chr16:30925891-30948783	0	+	30925891	30947230	789624	10	40,144,87,219,33,512,164,162,219,1732,	0,1416,1681,1853,2575,4181,16224,16483,20838,21160,
#Partially deleted in new
chr16	30942374	30948012	chr16:30942374-30948012	0	+	30942374	30947882	789624	3	162,219,165,	0,4355,5473,
#Partially deleted in new
chr16	30942431	30947651	chr16:30942431-30947651	0	+	30942431	30947202	789624	3	105,112,600,	0,4405,4620,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30948385	30954319	chr16:30948385-30954319	3	+	30948385	30948385	8553170	2	183,1135,	0,4799,
#Partially deleted in new
chr16	30948530	30956511	chr16:30948530-30956511	0	+	30948530	30948530	8553170	3	38,276,312,	0,4654,7669,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30949065	30954938	chr16:30949065-30954938	3	+	30949289	30953844	789624	2	452,1754,	0,4119,
#Partially deleted in new
chr16	30949080	30953548	chr16:30949080-30953548	0	+	30949289	30949765	789624	3	437,175,364,	0,616,4104,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	30949122	30954506	chr16:30949122-30954506	1	+	30949289	30954123	789624	3	395,528,470,	0,4062,4914,
#Partially deleted in new
chr16	30949151	30956461	chr16:30949151-30956461	1	+	30949289	30956205	789624	2	366,262,	0,7048,
#Deleted in new
chr16	30956871	30957199	chr16:30956871-30957199	3	-	30956871	30956871	8553170	1	328,	0,
#Partially deleted in new
chr16	30957293	30984664	chr16:30957293-30984664	3	+	30958731	30984023	0	19	671,165,96,271,122,230,850,786,177,88,158,88,342,1050,173,111,120,138,815,	0,1423,1797,3973,6139,6800,7318,8307,9590,10207,12011,12308,14084,21851,23191,23445,23767,26341,26556,
#Deleted in new
chr16	30958295	30959151	chr16:30958295-30959151	0	+	30958753	30959151	789624	3	89,165,61,	0,421,795,
#Partially deleted in new
chr16	30980052	30980851	chr16:30980052-30980851	0	+	30980052	30980052	8553170	2	605,113,	0,686,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	30984629	30988270	chr16:30984629-30988270	3	-	30984629	30984629	8553170	1	3641,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	30985206	30989146	chr16:30985206-30989146	1	+	30985658	30987827	789624	6	91,365,156,109,100,1379,	0,253,842,1216,1398,2561,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	30985210	30989152	chr16:30985210-30989152	3	+	30985658	30988183	789624	7	87,172,156,109,100,163,1385,	0,442,838,1212,1394,1629,2557,
#Partially deleted in new
chr16	30985214	30986707	chr16:30985214-30986707	0	+	30985658	30986707	789624	5	83,295,156,109,103,	0,438,834,1208,1390,
#Partially deleted in new
chr16	30985215	30986703	chr16:30985215-30986703	0	+	30985658	30986703	789624	5	82,300,156,109,99,	0,309,833,1207,1389,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	30989255	31010661	chr16:30989255-31010661	3	-	30992820	31010396	789624	10	3646,111,138,74,109,74,75,100,75,295,	0,3874,4091,7427,7695,8246,11672,11838,12273,21111,
#Partially deleted in new
chr16	30993081	31010396	chr16:30993081-31010396	1	-	30993081	31010396	789624	9	159,138,74,109,74,75,100,75,30,	0,265,3601,3869,4420,7846,8012,8447,17285,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	30996198	30997044	chr16:30996198-30997044	0	-	30996198	30996198	8553170	2	558,94,	0,752,
#Deleted in new
chr16	31032888	31035032	chr16:31032888-31035032	0	+	31033023	31035032	789624	7	21,77,133,102,100,75,63,	0,111,501,1124,1337,1573,2081,
#Partially deleted in new
chr16	31033094	31040163	chr16:31033094-31040163	1	+	31033520	31039803	789624	12	212,133,102,122,75,71,109,77,138,111,96,252,	0,295,918,1109,1367,1875,4831,5019,5415,6446,6628,6817,
#Partially deleted in new
chr16	31033094	31040129	chr16:31033094-31040129	0	+	31033094	31033094	8553170	12	428,102,100,75,71,63,109,77,138,111,96,218,	0,918,1131,1367,1875,2604,4831,5019,5415,6446,6628,6817,
#Partially deleted in new
chr16	31033490	31040168	chr16:31033490-31040168	3	+	31033805	31039803	789624	11	345,102,100,75,71,109,77,138,111,96,257,	0,522,735,971,1479,4435,4623,5019,6050,6232,6421,
#Partially deleted in new
chr16	31033545	31039803	chr16:31033545-31039803	0	+	31033545	31033545	8553170	9	290,102,311,71,109,77,138,111,81,	0,467,680,1424,4380,4568,4964,5995,6177,
#Partially deleted in new
chr16	31033546	31038187	chr16:31033546-31038187	0	+	31033805	31034266	789624	7	289,102,122,75,71,109,74,	0,466,657,915,1423,4379,4567,
#Partially deleted in new
chr16	31033546	31038647	chr16:31033546-31038647	0	+	31033805	31034266	789624	8	289,102,122,75,71,109,77,138,	0,466,657,915,1423,4379,4567,4963,
#Deleted in new
chr16	31033556	31034518	chr16:31033556-31034518	0	+	31033556	31033556	8553170	3	279,102,315,	0,456,647,
#Deleted in new
chr16	31033587	31034877	chr16:31033587-31034877	0	+	31033587	31033587	8553170	3	248,102,652,	0,425,638,
#Deleted in new
chr16	31033605	31034853	chr16:31033605-31034853	0	+	31033605	31033605	8553170	4	230,102,122,392,	0,407,598,856,
#Deleted in new
chr16	31033785	31034507	chr16:31033785-31034507	0	+	31033785	31033785	8553170	2	50,495,	0,227,
#Deleted in new
chr16	31033804	31034877	chr16:31033804-31034877	0	+	31033804	31034574	789624	4	31,102,100,416,	0,208,421,657,
#Deleted in new
chr16	31038509	31040012	chr16:31038509-31040012	0	+	31038509	31038509	8553170	2	138,472,	0,1031,
#Deleted in new
chr16	31038600	31040168	chr16:31038600-31040168	0	+	31038600	31038600	8553170	3	47,111,446,	0,940,1122,
#Deleted in new
chr16	31038618	31040168	chr16:31038618-31040168	0	+	31038618	31038618	8553170	3	29,278,257,	0,922,1293,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	31039079	31042975	chr16:31039079-31042975	0	+	31039079	31039079	8553170	5	199,111,96,137,834,	0,461,643,2811,3062,
#Deleted in new
chr16	31039319	31040147	chr16:31039319-31040147	0	+	31039319	31039319	8553170	4	118,111,96,236,	0,221,403,592,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	31043149	31049868	chr16:31043149-31049868	3	+	31043149	31043149	8553170	2	93,356,	0,6363,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	31056459	31062803	chr16:31056459-31062803	3	+	31056459	31056459	8553170	2	266,3114,	0,3230,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	31059476	31062763	chr16:31059476-31062763	0	+	31059476	31059476	8553170	1	3287,	0,
#Partially deleted in new
chr16	31060842	31065088	chr16:31060842-31065088	1	-	31061067	31064459	789624	3	1438,669,289,	0,2970,3957,
#Partially deleted in new
chr16	31060847	31064969	chr16:31060847-31064969	1	-	31061067	31064618	789624	4	1433,669,114,66,	0,2965,3724,4056,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	31060847	31073502	chr16:31060847-31073502	1	-	31061067	31064459	789624	3	1433,669,763,	0,2965,11892,
#Partially deleted in new
chr16	31060849	31074320	chr16:31060849-31074320	3	-	31061067	31064459	789624	3	1431,669,662,	0,2963,12809,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	31060849	31073502	chr16:31060849-31073502	1	-	31061067	31064459	789624	3	1431,669,617,	0,2963,12036,
#Partially deleted in new
chr16	31060850	31065055	chr16:31060850-31065055	1	-	31061067	31064618	789624	4	1430,669,114,256,	0,2962,3721,3949,
#Partially deleted in new
chr16	31062121	31073712	chr16:31062121-31073712	0	-	31062121	31064459	789624	3	159,187,54,	0,2173,11537,
#Partially deleted in new
chr16	31063968	31065088	chr16:31063968-31065088	0	-	31063968	31064459	789624	2	513,289,	0,831,
#Partially deleted in new
chr16	31064183	31072827	chr16:31064183-31072827	0	-	31064183	31064459	789624	2	298,88,	0,8556,
#Partially deleted in new
chr16	31064649	31074184	chr16:31064649-31074184	0	-	31064649	31064649	8553170	2	36,526,	0,9009,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	31065494	31069246	chr16:31065494-31069246	3	+	31065494	31065494	8553170	2	88,416,	0,3336,
#Partially deleted in new
chr16	31074421	31084196	chr16:31074421-31084196	3	+	31076324	31083092	789624	3	210,5456,1226,	0,1824,8549,
#Partially deleted in new
chr16	31074422	31076488	chr16:31074422-31076488	0	+	31076324	31076488	789624	2	339,243,	0,1823,
#Partially deleted in new
chr16	31074442	31077044	chr16:31074442-31077044	0	+	31076324	31077044	789624	2	278,799,	0,1803,
#Deleted in new
chr16	31075901	31084019	chr16:31075901-31084019	1	+	31076324	31081814	789624	1	8118,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	31083424	31088963	chr16:31083424-31088963	3	-	31083789	31088809	789624	11	385,217,146,245,151,220,155,266,163,21,212,	0,694,1133,1355,1685,2539,2912,3208,4112,4381,5327,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	31083436	31089628	chr16:31083436-31089628	0	-	31083436	31083436	8553170	2	1824,3665,	0,2527,
#Partially deleted in new
chr16	31083438	31094602	chr16:31083438-31094602	0	-	31091133	31094602	789624	13	371,217,146,245,151,220,155,266,163,21,251,110,46,	0,680,1119,1341,1671,2525,2898,3194,4098,4367,7653,9873,11118,
#Partially deleted in new
chr16	31086014	31088728	chr16:31086014-31088728	0	-	31086014	31086014	8553170	4	169,155,266,1192,	0,322,618,1522,
#Partially deleted in new
chr16	31086759	31094916	chr16:31086759-31094916	0	-	31086759	31094729	789624	2	139,360,	0,7797,
#Partially deleted in new
chr16	31086867	31094956	chr16:31086867-31094956	3	-	31086867	31094729	789624	5	31,163,21,110,400,	0,669,938,6444,7689,
#Partially deleted in new
chr16	31090841	31094760	chr16:31090841-31094760	1	-	31091236	31094729	789624	3	501,171,204,	0,2470,3715,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	31090841	31094940	chr16:31090841-31094940	1	-	31091236	31094729	789624	4	501,82,110,384,	0,1941,2470,3715,
#Partially deleted in new
chr16	31090841	31094956	chr16:31090841-31094956	1	-	31091236	31094729	789624	2	501,400,	0,3715,
#Partially deleted in new
chr16	31090841	31094957	chr16:31090841-31094957	3	-	31091133	31094729	789624	3	501,110,401,	0,2470,3715,
#Partially deleted in new
chr16	31090841	31095633	chr16:31090841-31095633	0	-	31091309	31095633	789624	2	501,245,	0,4547,
#Partially deleted in new
chr16	31091103	31094549	chr16:31091103-31094549	1	-	31091236	31094501	789624	3	239,110,315,	0,2208,3131,
#Partially deleted in new
chr16	31091174	31095980	chr16:31091174-31095980	1	-	31091236	31095658	789624	3	168,110,592,	0,2137,4214,
#Partially deleted in new
chr16	31091181	31093611	chr16:31091181-31093611	0	-	31091181	31091310	789624	2	161,300,	0,2130,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	31093726	31095944	chr16:31093726-31095944	3	+	31093726	31093726	8553170	1	2218,	0,
#Partially deleted in new
chr16	31106106	31112567	chr16:31106106-31112567	3	+	31109223	31112265	789624	13	107,339,372,69,111,48,120,99,74,129,90,159,447,	0,1700,2940,3404,3566,3970,4098,4294,4581,4984,5193,5762,6014,
#Partially deleted in new
chr16	31108293	31112791	chr16:31108293-31112791	1	+	31109223	31112265	789624	12	186,372,69,111,48,120,99,74,129,90,159,671,	0,753,1217,1379,1783,1911,2107,2394,2797,3006,3575,3827,
#Partially deleted in new
chr16	31108293	31112567	chr16:31108293-31112567	1	+	31109223	31112031	789624	10	186,372,69,111,48,120,99,74,129,699,	0,753,1217,1379,1783,1911,2107,2394,2797,3575,
#Partially deleted in new
chr16	31108293	31112567	chr16:31108293-31112567	1	+	31109223	31112031	789624	11	186,372,69,111,48,120,99,74,129,90,699,	0,753,1217,1379,1783,1911,2107,2394,2797,3006,3575,
#Partially deleted in new
chr16	31108293	31112533	chr16:31108293-31112533	0	+	31109223	31111102	789624	11	186,372,69,111,48,120,99,129,90,159,413,	0,753,1217,1379,1783,1911,2107,2797,3006,3575,3827,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	31108448	31112566	chr16:31108448-31112566	0	+	31108448	31108448	8553170	9	31,372,69,452,120,819,90,159,446,	0,598,1062,1224,1756,1952,2851,3420,3672,
#Deleted in new
chr16	31108483	31109403	chr16:31108483-31109403	0	+	31109223	31109403	789624	2	283,357,	0,563,
#Deleted in new
chr16	31108933	31109579	chr16:31108933-31109579	0	+	31109223	31109579	789624	2	485,69,	0,577,
#Deleted in new
chr16	31109119	31110722	chr16:31109119-31110722	0	+	31109223	31110722	789624	7	299,69,111,21,120,99,35,	0,391,553,984,1085,1281,1568,
#Deleted in new
chr16	31111367	31112454	chr16:31111367-31112454	0	+	31111367	31112454	789624	3	22,159,258,	0,501,829,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	31115753	31131393	chr16:31115753-31131393	3	+	31117681	31131259	0	12	116,430,75,176,54,165,90,141,94,151,155,199,	0,1709,4432,4585,11281,11435,12296,14263,14513,14702,14992,15441,
#Partially deleted in new
chr16	31117663	31131389	chr16:31117663-31131389	1	+	31117681	31131259	0	11	229,75,176,54,165,90,141,94,151,155,195,	0,2522,2675,9371,9525,10386,12353,12603,12792,13082,13531,
#Partially deleted in new
chr16	31117663	31131359	chr16:31117663-31131359	1	+	31117681	31130992	0	10	229,75,176,54,165,90,141,94,151,614,	0,2522,2675,9371,9525,10386,12353,12603,12792,13082,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	31117696	31121118	chr16:31117696-31121118	0	+	31117696	31117696	8553170	3	196,75,780,	0,2489,2642,
#Deleted in new
chr16	31118077	31118747	chr16:31118077-31118747	3	+	31118077	31118077	8553170	2	499,44,	0,626,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	31122234	31123953	chr16:31122234-31123953	3	+	31122234	31122234	8553170	2	364,164,	0,1555,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	31123672	31124064	chr16:31123672-31124064	1	+	31123672	31123672	8553170	1	392,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	31125583	31131393	chr16:31125583-31131393	0	+	31125583	31125583	8553170	8	1505,165,90,141,94,151,155,199,	0,1605,2466,4433,4683,4872,5162,5611,
#Partially deleted in new
chr16	31127271	31131393	chr16:31127271-31131393	0	+	31127271	31130610	789624	5	82,90,141,94,938,	0,778,2745,2995,3184,
#Deleted in new
chr16	31130455	31131359	chr16:31130455-31131359	0	+	31130455	31130455	8553170	2	445,165,	0,739,
#Partially deleted in new
chr16	31131432	31135762	chr16:31131432-31135762	3	-	31132008	31135498	0	6	903,167,272,163,18,349,	0,996,1249,1793,3721,3981,
#Deleted in new
chr16	31131432	31131877	chr16:31131432-31131877	3	+	31131432	31131432	8553170	2	172,185,	0,260,
#Partially deleted in new
chr16	31131893	31135727	chr16:31131893-31135727	1	-	31132008	31135498	0	6	442,167,199,74,18,314,	0,535,788,1421,3260,3520,
#Partially deleted in new
chr16	31132438	31135640	chr16:31132438-31135640	0	-	31132438	31135498	789624	5	157,164,163,18,227,	0,243,787,2715,2975,
#Partially deleted in new
chr16	31132878	31135727	chr16:31132878-31135727	0	-	31132878	31135498	789624	3	75,163,314,	0,347,2535,
#Partially deleted in new
chr16	31133199	31135727	chr16:31133199-31135727	0	-	31133199	31133199	8553170	3	189,18,314,	0,1954,2214,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	31134041	31135703	chr16:31134041-31135703	0	-	31134041	31134041	8553170	2	1130,290,	0,1372,
#Partially deleted in new
chr16	31138924	31150094	chr16:31138924-31150094	3	-	31139137	31150035	789624	15	492,122,266,142,238,164,257,130,250,167,281,163,36,36,96,	0,1369,1567,2544,2798,3556,3812,4417,4663,6864,9470,10148,10538,10771,11074,
#Partially deleted in new
chr16	31138927	31149534	chr16:31138927-31149534	0	-	31138927	31138927	8553170	13	489,122,266,142,238,164,257,130,250,167,318,163,72,	0,1366,1564,2541,2795,3553,3809,4414,4660,6861,9467,10145,10535,
#Partially deleted in new
chr16	31138981	31150066	chr16:31138981-31150066	1	-	31139137	31150035	789624	14	435,79,142,238,164,257,130,250,167,281,163,36,36,68,	0,1697,2487,2741,3499,3755,4360,4606,6807,9413,10091,10481,10714,11017,
#Partially deleted in new
chr16	31138993	31150061	chr16:31138993-31150061	1	-	31139137	31150035	789624	15	423,122,266,142,238,149,257,130,250,167,281,163,36,36,63,	0,1300,1498,2475,2729,3502,3743,4348,4594,6795,9401,10079,10469,10702,11005,
#Partially deleted in new
chr16	31139066	31140734	chr16:31139066-31140734	0	-	31140385	31140734	789624	3	350,122,56,	0,1227,1612,
#Partially deleted in new
chr16	31141463	31142858	chr16:31141463-31142858	0	-	31141463	31141463	8553170	3	497,164,122,	0,1017,1273,
#Partially deleted in new
chr16	31148465	31149534	chr16:31148465-31149534	0	-	31148465	31148465	8553170	3	247,270,72,	0,607,997,
#Partially deleted in new
chr16	31149100	31150008	chr16:31149100-31150008	0	-	31149100	31149100	8553170	3	135,36,313,	0,362,595,
#Partially deleted in new
chr16	31149271	31150083	chr16:31149271-31150083	0	-	31149271	31149271	8553170	2	460,85,	0,727,
#Deleted in new
chr16	31165647	31165927	chr16:31165647-31165927	7	+	31165647	31165647	16724991	1	280,	0,
#Deleted in new
chr16	31174572	31174822	chr16:31174572-31174822	7	+	31174572	31174572	16724991	1	250,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	31180109	31194871	chr16:31180109-31194871	3	+	31180214	31191438	0	15	118,25,152,145,188,241,35,33,104,130,102,124,101,148,3473,	0,2288,2403,3748,4099,4829,6692,8215,9013,9555,9930,10165,10632,10853,11289,
#Partially deleted in new
chr16	31180137	31191602	chr16:31180137-31191602	0	+	31180214	31188352	789624	14	90,25,152,145,188,241,33,104,130,102,124,101,148,204,	0,2260,2375,3720,4071,4801,8187,8985,9527,9902,10137,10604,10825,11261,
#Partially deleted in new
chr16	31180138	31191602	chr16:31180138-31191602	1	+	31180214	31191438	0	15	89,25,152,142,188,241,35,33,104,130,102,124,101,148,204,	0,2259,2374,3722,4070,4800,6663,8186,8984,9526,9901,10136,10603,10824,11260,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	31180138	31183350	chr16:31180138-31183350	0	+	31180138	31180138	8553170	3	89,25,838,	0,2259,2374,
#Partially deleted in new
chr16	31180149	31191602	chr16:31180149-31191602	0	+	31180149	31180149	8553170	13	78,25,152,145,188,3419,104,130,102,124,101,148,204,	0,2248,2363,3708,4059,4789,8973,9515,9890,10125,10592,10813,11249,
#Partially deleted in new
chr16	31180150	31191575	chr16:31180150-31191575	1	+	31180214	31191438	789624	15	77,25,152,145,188,241,35,33,107,130,102,124,101,148,177,	0,2247,2362,3707,4058,4788,6651,8174,8969,9514,9889,10124,10591,10812,11248,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	31182510	31183285	chr16:31182510-31183285	3	-	31182510	31182510	8553170	2	329,134,	0,641,
#Deleted in new
chr16	31183549	31184398	chr16:31183549-31184398	0	+	31183549	31183549	8553170	2	453,190,	0,659,
#Deleted in new
chr16	31185079	31187245	chr16:31185079-31187245	0	+	31185079	31185079	8553170	2	100,444,	0,1722,
#Partially deleted in new
chr16	31185498	31191102	chr16:31185498-31191102	0	+	31185498	31185498	8553170	9	58,35,33,104,130,102,124,101,140,	0,1303,2826,3624,4166,4541,4776,5243,5464,
#Partially deleted in new
chr16	31188151	31190120	chr16:31188151-31190120	0	+	31188151	31188151	8553170	4	206,104,130,81,	0,971,1513,1888,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	31188466	31189695	chr16:31188466-31189695	0	+	31188466	31188466	8553170	2	760,31,	0,1198,
#Deleted in new
chr16	31190215	31191605	chr16:31190215-31191605	0	+	31190215	31190215	8553170	4	183,101,148,207,	0,526,747,1183,
#Deleted in new
chr16	31190372	31191558	chr16:31190372-31191558	0	+	31190372	31190372	8553170	3	470,148,160,	0,590,1026,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	31196130	31196963	chr16:31196130-31196963	3	+	31196130	31196130	8553170	1	833,	0,
#Partially deleted in new
chr16	31201484	31202992	chr16:31201484-31202992	3	-	31201584	31202690	0	3	357,57,576,	0,662,932,
#Partially deleted in new
chr16	31201485	31202756	chr16:31201485-31202756	1	-	31201584	31202690	0	2	356,340,	0,931,
#Partially deleted in new
chr16	31201485	31202440	chr16:31201485-31202440	0	-	31201485	31201485	8553170	2	356,294,	0,661,
#Partially deleted in new
chr16	31201884	31203452	chr16:31201884-31203452	3	+	31201884	31201884	789624	2	102,993,	0,575,
#Partially deleted in new
chr16	31202193	31203450	chr16:31202193-31203450	0	-	31202193	31202690	789624	2	103,1034,	0,223,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	31214020	31231537	chr16:31214020-31231537	3	+	31214738	31224755	0	7	277,397,96,231,23,119,7357,	0,711,5074,5268,6875,8806,10160,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	31214090	31226427	chr16:31214090-31226427	1	+	31214738	31225878	0	7	207,397,96,231,23,63,556,	0,641,5004,5198,6805,8736,11781,
#Partially deleted in new
chr16	31215961	31217359	chr16:31215961-31217359	3	-	31216758	31217028	0	2	196,617,	0,781,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	31215961	31216370	chr16:31215961-31216370	0	-	31215961	31215961	8553170	2	196,48,	0,361,
#Partially deleted in new
chr16	31259966	31332892	chr16:31259966-31332892	1	+	31260064	31331707	789624	30	126,106,104,71,118,131,146,154,151,74,130,143,141,213,131,164,155,132,74,142,123,80,84,76,108,84,114,102,111,1257,	0,1725,5428,5844,6063,10987,11880,13398,15582,16704,16953,18000,37547,37775,61274,61497,64432,64684,64991,65296,65533,66889,68180,69261,69831,70114,70341,70537,71198,71669,
#Partially deleted in new
chr16	31259974	31332892	chr16:31259974-31332892	1	+	31260064	31331707	0	30	118,106,104,71,118,131,146,154,151,74,130,143,141,213,131,164,155,132,74,142,123,80,84,76,108,84,114,102,111,1257,	0,1717,5420,5836,6055,10979,11872,13390,15574,16696,16945,17992,37539,37767,61266,61489,64424,64676,64983,65288,65525,66881,68172,69253,69823,70106,70333,70529,71190,71661,
#Partially deleted in new
chr16	31259989	31331829	chr16:31259989-31331829	3	+	31260064	31331707	0	30	103,106,104,71,118,131,146,154,151,74,130,143,141,210,131,164,155,132,74,142,123,80,84,76,108,84,114,102,111,194,	0,1702,5405,5821,6040,10964,11857,13375,15559,16681,16930,17977,37524,37755,61251,61474,64409,64661,64968,65273,65510,66866,68157,69238,69808,70091,70318,70514,71175,71646,
#Partially deleted in new
chr16	31271884	31273684	chr16:31271884-31273684	0	+	31271884	31271884	8553170	2	108,320,	0,1480,
#Partially deleted in new
chr16	31275591	31324439	chr16:31275591-31324439	0	+	31275591	31324439	789624	5	108,74,130,141,41,	0,1079,1328,21922,48807,
#Partially deleted in new
chr16	31324677	31326968	chr16:31324677-31326968	0	+	31324677	31324677	8553170	5	105,74,142,123,113,	0,280,585,822,2178,
#Deleted in new
chr16	31328036	31329905	chr16:31328036-31329905	0	+	31328036	31328036	8553170	3	194,76,108,	0,1191,1761,
#Deleted in new
chr16	31329001	31330052	chr16:31329001-31330052	0	+	31329001	31329001	8553170	2	302,255,	0,796,
#Partially deleted in new
chr16	31330379	31331536	chr16:31330379-31331536	0	+	31330379	31331374	789624	3	42,102,372,	0,124,785,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr16	31355133	31382997	chr16:31355133-31382997	3	+	31355254	31381907	0	30	158,106,104,71,112,131,146,154,151,74,130,143,141,210,131,164,155,132,74,142,117,80,84,79,108,84,114,102,111,1195,	0,759,1491,1897,2119,4566,4786,5176,5929,6702,6941,7477,7801,8031,15950,16200,16496,17244,17463,18115,21665,21866,22048,24434,24623,24848,25132,25389,25763,26669,
#Partially deleted in new
chr16	31355133	31356278	chr16:31355133-31356278	0	+	31355133	31355133	8553170	2	158,386,	0,759,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	31355173	31358455	chr16:31355173-31358455	1	+	31355254	31357561	789624	5	118,106,104,71,1122,	0,719,1451,1857,2160,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	31355187	31357862	chr16:31355187-31357862	0	+	31355187	31355187	8553170	4	104,106,104,832,	0,705,1437,1843,
#Partially deleted in new
chr16	31355221	31382943	chr16:31355221-31382943	1	+	31355254	31382496	789624	31	70,106,104,71,112,131,146,154,151,74,130,143,141,210,131,164,155,132,74,142,117,80,84,79,108,84,114,102,111,94,476,	0,671,1403,1809,2031,4478,4698,5088,5841,6614,6853,7389,7713,7943,15862,16112,16408,17156,17375,18027,21577,21778,21960,24346,24535,24760,25044,25301,25675,26581,27246,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr16	31359936	31382932	chr16:31359936-31382932	0	+	31359936	31359936	8553170	22	129,904,74,130,143,141,210,118,131,164,155,74,117,80,84,79,108,84,114,102,111,1130,	0,373,1899,2138,2674,2998,3228,10044,11147,11397,11693,12660,16862,17063,17245,19631,19820,20045,20329,20586,20960,21866,
#Deleted in new
chr16	31361277	31361695	chr16:31361277-31361695	7	-	31361277	31361277	16724991	2	176,157,	0,261,
#Deleted in new
chr16	31371473	31372654	chr16:31371473-31372654	0	+	31371473	31371473	8553170	3	311,132,58,	0,904,1123,
#Partially deleted in new
chr16	31393311	31426505	chr16:31393311-31426505	3	+	31393360	31426128	789624	30	80,106,104,71,115,131,146,154,151,74,130,143,141,210,131,158,155,132,74,142,117,80,84,79,108,78,114,102,111,491,	0,924,4047,4284,4483,8803,10188,14203,14454,15113,17083,17424,17764,17996,19526,19777,21139,21548,22901,23193,24763,24989,25169,29802,30040,30259,30533,30790,31155,32703,
#Partially deleted in new
chr16	31393334	31408619	chr16:31393334-31408619	0	+	31393334	31393334	8553170	9	57,106,104,71,115,131,146,402,195,	0,901,4024,4261,4460,8780,10165,14180,15090,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	31402564	31404699	chr16:31402564-31404699	3	+	31402564	31402564	8553170	2	304,1463,	0,672,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	31423941	31424715	chr16:31423941-31424715	0	+	31423941	31423941	8553170	2	262,249,	0,525,
#Deleted in new
chr16	31427730	31428428	chr16:31427730-31428428	3	-	31427773	31428325	789624	3	127,137,176,	0,284,522,
#Deleted in new
chr16	31427775	31428285	chr16:31427775-31428285	0	-	31427775	31427775	8553170	2	82,271,	0,239,
#Deleted in new
chr16	31428179	31428646	chr16:31428179-31428646	3	+	31428179	31428179	8553170	1	467,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	31432592	31443025	chr16:31432592-31443025	1	-	31434801	31436849	789624	3	2409,1017,390,	0,3575,10043,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	31435437	31443025	chr16:31435437-31443025	1	-	31435802	31436849	789624	2	1747,390,	0,7198,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	31435437	31443160	chr16:31435437-31443160	3	-	31435802	31436849	789624	2	1747,18,	0,7705,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	31449534	31453493	chr16:31449534-31453493	3	-	31449534	31449534	8553170	2	239,210,	0,3749,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	31456710	31459736	chr16:31456710-31459736	3	-	31456710	31456710	8553170	1	3026,	0,
#Partially deleted in new
chr16	31458079	31467105	chr16:31458079-31467105	1	+	31458396	31466889	789624	8	422,123,532,108,787,494,133,1027,	0,774,1388,3842,4051,6314,7770,7999,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	31458823	31467166	chr16:31458823-31467166	3	+	31459524	31465201	789624	4	1176,108,787,2773,	0,3098,3307,5570,
#Partially deleted in new
chr16	31458851	31467084	chr16:31458851-31467084	1	+	31459524	31466889	789624	7	489,532,108,787,494,133,1006,	0,616,3070,3279,5542,6998,7227,
#Partially deleted in new
chr16	31458995	31467164	chr16:31458995-31467164	1	+	31459524	31466889	789624	6	1004,108,787,494,133,1086,	0,2926,3135,5398,6854,7083,
#Partially deleted in new
chr16	31459086	31467164	chr16:31459086-31467164	1	+	31461938	31466889	789624	7	215,194,108,787,494,133,1086,	0,719,2835,3044,5307,6763,6992,
#Partially deleted in new
chr16	31459960	31467165	chr16:31459960-31467165	0	+	31459960	31466889	789624	7	39,108,65,146,494,133,1087,	0,1961,2170,2811,4433,5889,6118,
#Partially deleted in new
chr16	31459993	31462323	chr16:31459993-31462323	0	+	31459993	31460025	789624	3	285,108,193,	0,1928,2137,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	31465332	31466151	chr16:31465332-31466151	0	+	31465332	31465332	8553170	2	650,73,	0,746,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	31470203	31472108	chr16:31470203-31472108	3	-	31470203	31470203	8553170	1	1905,	0,
#Deleted in new
chr16	31471584	31474590	chr16:31471584-31474590	0	+	31473478	31474590	789624	7	39,116,53,143,88,106,28,	0,1856,2097,2250,2567,2765,2978,
#Partially deleted in new
chr16	31472029	31477600	chr16:31472029-31477600	0	+	31472188	31473927	789624	10	172,53,143,88,106,195,174,82,149,291,	0,1652,1805,2122,2320,2533,3982,4451,4832,5280,
#Partially deleted in new
chr16	31472058	31477958	chr16:31472058-31477958	1	+	31472188	31477576	789624	11	143,116,53,143,88,106,195,174,82,149,649,	0,1382,1623,1776,2093,2291,2504,3953,4422,4803,5251,
#Deleted in new
chr16	31472140	31473939	chr16:31472140-31473939	0	+	31472140	31472140	8553170	2	61,499,	0,1300,
#Partially deleted in new
chr16	31472153	31477600	chr16:31472153-31477600	0	+	31472188	31474155	789624	10	48,116,53,88,106,195,174,82,149,291,	0,1287,1528,1998,2196,2409,3858,4327,4708,5156,
#Deleted in new
chr16	31472154	31474095	chr16:31472154-31474095	0	+	31472154	31472154	8553170	3	47,116,414,	0,1286,1527,
#Deleted in new
chr16	31472156	31474239	chr16:31472156-31474239	0	+	31472156	31472156	8553170	4	45,294,143,88,	0,1284,1678,1995,
#Deleted in new
chr16	31472167	31474759	chr16:31472167-31474759	0	+	31473440	31474759	789624	6	34,116,143,88,106,197,	0,1273,1667,1984,2182,2395,
#Deleted in new
chr16	31472170	31474100	chr16:31472170-31474100	0	+	31472170	31472170	8553170	4	31,116,53,266,	0,1270,1511,1664,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	31472170	31477958	chr16:31472170-31477958	0	+	31472170	31472170	8553170	6	1386,296,88,106,2448,649,	0,1511,1981,2179,2392,5139,
#Partially deleted in new
chr16	31472174	31476288	chr16:31472174-31476288	0	+	31472174	31472174	8553170	8	27,116,53,143,88,106,195,277,	0,1266,1507,1660,1977,2175,2388,3837,
#Partially deleted in new
chr16	31472207	31477960	chr16:31472207-31477960	3	+	31473478	31477576	789624	11	16,116,53,143,88,106,195,174,82,149,651,	0,1233,1474,1627,1944,2142,2355,3804,4273,4654,5102,
#Deleted in new
chr16	31473079	31473972	chr16:31473079-31473972	0	+	31473478	31473972	789624	3	477,53,138,	0,602,755,
#Partially deleted in new
chr16	31473204	31477960	chr16:31473204-31477960	1	+	31473478	31477576	789624	11	46,116,53,143,88,106,195,174,82,149,651,	0,236,477,630,947,1145,1358,2807,3276,3657,4105,
#Partially deleted in new
chr16	31473425	31477958	chr16:31473425-31477958	1	+	31473478	31477576	789624	10	131,53,143,88,106,195,174,82,149,649,	0,256,409,726,924,1137,2586,3055,3436,3884,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	31473433	31476802	chr16:31473433-31476802	0	+	31473433	31473433	8553170	7	123,53,143,88,106,1623,322,	0,248,401,718,916,1129,3047,
#Partially deleted in new
chr16	31473439	31477906	chr16:31473439-31477906	0	+	31473478	31474420	789624	9	117,53,143,106,195,174,82,149,597,	0,242,395,910,1123,2572,3041,3422,3870,
#Partially deleted in new
chr16	31483001	31486276	chr16:31483001-31486276	0	+	31484675	31486276	789624	5	67,72,105,165,107,	0,1671,1817,2727,3168,
#Partially deleted in new
chr16	31483117	31490768	chr16:31483117-31490768	3	+	31483136	31490535	789624	14	145,72,105,165,106,81,230,136,108,151,169,216,127,460,	0,1555,1701,2611,3052,4202,4412,4920,5265,5504,5762,6005,6986,7191,
#Partially deleted in new
chr16	31483117	31490669	chr16:31483117-31490669	0	+	31483136	31490135	789624	12	145,72,105,165,106,81,230,136,108,216,127,361,	0,1555,1701,2611,3052,4202,4412,4920,5265,6005,6986,7191,
#Partially deleted in new
chr16	31483137	31485616	chr16:31483137-31485616	0	+	31483137	31483137	8553170	3	125,72,798,	0,1535,1681,
#Deleted in new
chr16	31484746	31486276	chr16:31484746-31486276	0	+	31484746	31484746	8553170	3	177,165,107,	0,982,1423,
#Deleted in new
chr16	31487369	31488492	chr16:31487369-31488492	3	-	31487369	31487369	8553170	2	410,168,	0,955,
#Deleted in new
chr16	31488019	31490769	chr16:31488019-31490769	0	+	31488019	31488019	8553170	3	154,666,1647,	0,363,1103,
#Deleted in new
chr16	31488209	31490344	chr16:31488209-31490344	0	+	31488209	31488209	8553170	4	281,216,127,36,	0,913,1894,2099,
#Partially deleted in new
chr16	31489470	31508391	chr16:31489470-31508391	1	-	31490834	31508373	789624	13	1462,78,144,71,58,179,71,102,106,33,46,115,318,	0,2538,2726,3507,3996,4132,4395,7378,9831,10022,11215,18293,18603,
#Partially deleted in new
chr16	31489488	31508413	chr16:31489488-31508413	3	-	31490834	31508373	789624	13	1444,78,144,71,58,185,71,102,106,33,46,115,340,	0,2520,2708,3489,3978,4114,4377,7360,9813,10004,11197,18275,18585,
#Deleted in new
chr16	31489488	31490860	chr16:31489488-31490860	0	+	31489488	31489488	8553170	2	216,282,	0,1090,
#Deleted in new
chr16	31489488	31490845	chr16:31489488-31490845	0	+	31489488	31489488	8553170	2	186,148,	0,1209,
#Partially deleted in new
chr16	31489493	31493738	chr16:31489493-31493738	0	-	31489493	31489493	8553170	4	1439,78,144,761,	0,2515,2703,3484,
#Partially deleted in new
chr16	31489497	31508379	chr16:31489497-31508379	1	-	31490834	31508373	789624	14	657,499,78,144,71,58,185,71,102,106,33,46,115,306,	0,936,2511,2699,3480,3969,4105,4368,7351,9804,9995,11188,18266,18576,
#Partially deleted in new
chr16	31490272	31508384	chr16:31490272-31508384	1	-	31490834	31508373	789624	14	660,78,144,71,58,185,71,102,106,33,46,115,60,116,	0,1736,1924,2705,3194,3330,3593,6576,9029,9220,10413,17491,17801,17996,
#Partially deleted in new
chr16	31493196	31496952	chr16:31493196-31496952	0	-	31493196	31493196	8553170	3	591,71,104,	0,669,3652,
#Partially deleted in new
chr16	31493454	31508384	chr16:31493454-31508384	0	-	31493454	31493454	8553170	5	482,102,46,115,311,	0,3394,7231,14309,14619,
#Partially deleted in new
chr16	31493735	31508386	chr16:31493735-31508386	0	-	31496873	31508373	789624	5	52,71,102,46,313,	0,130,3113,6950,14338,
#Partially deleted in new
chr16	31493898	31508384	chr16:31493898-31508384	0	-	31499378	31508373	789624	6	38,102,106,33,46,311,	0,2950,5403,5594,6787,14175,
#Partially deleted in new
chr16	31496878	31509309	chr16:31496878-31509309	0	-	31496878	31500720	789624	6	72,106,33,46,115,183,	0,2423,2614,3807,10885,12248,
#Partially deleted in new
chr16	31499241	31508154	chr16:31499241-31508154	0	-	31499241	31499241	8553170	5	166,33,46,115,81,	0,251,1444,8522,8832,
#Partially deleted in new
chr16	31508470	31509256	chr16:31508470-31509256	3	+	31508470	31508470	8553170	2	566,89,	0,697,
#Deleted in new
chr16	31527863	31528803	chr16:31527863-31528803	3	+	31528139	31528691	0	3	99,79,346,	0,272,594,
#Deleted in new
chr16	31527913	31528803	chr16:31527913-31528803	0	+	31527913	31527913	8553170	3	18,27,346,	0,274,544,
#Deleted in new
chr16	31527976	31528553	chr16:31527976-31528553	0	+	31528139	31528553	789624	3	38,79,96,	0,159,481,
#Partially deleted in new
chr16	31546697	31547237	chr16:31546697-31547237	3	-	31546697	31546697	8553170	1	540,	0,
#Partially deleted in new
chr16	31546804	31547737	chr16:31546804-31547737	7	+	31546804	31546804	16724991	1	933,	0,
#Partially deleted in new
chr16	31549142	31553567	chr16:31549142-31553567	3	-	31549142	31549142	8553170	2	145,423,	0,4002,
#Deleted in new
chr16	31554104	31554912	chr16:31554104-31554912	7	+	31554104	31554104	16724991	1	808,	0,
#Deleted in new
chr16	31563081	31564783	chr16:31563081-31564783	5	-	31563081	31563081	16724991	4	518,77,51,181,	0,843,1153,1521,
#Partially deleted in new
chr16	31563184	31567716	chr16:31563184-31567716	7	-	31563184	31563184	16724991	4	450,77,101,343,	0,740,1423,4189,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	31566359	31567000	chr16:31566359-31567000	3	-	31566359	31566359	8553170	1	641,	0,
#Deleted in new
chr16	31568385	31569475	chr16:31568385-31569475	7	-	31568385	31568385	16724991	1	1090,	0,
#Deleted in new
chr16	31601592	31603531	chr16:31601592-31603531	7	-	31601592	31601592	16724991	1	1939,	0,
#Deleted in new
chr16	31648306	31649222	chr16:31648306-31649222	7	+	31648306	31648306	16724991	1	916,	0,
#Deleted in new
chr16	31680846	31682101	chr16:31680846-31682101	7	+	31680846	31680846	16724991	1	1255,	0,
#Deleted in new
chr16	31697396	31697607	chr16:31697396-31697607	7	-	31697396	31697396	16724991	1	211,	0,
#Deleted in new
chr16	31699675	31700465	chr16:31699675-31700465	3	-	31699675	31699675	8553170	3	279,153,106,	0,433,684,
#Partially deleted in new
chr16	31700589	31707437	chr16:31700589-31707437	7	+	31700589	31700589	16724991	9	149,196,147,212,171,124,121,145,547,	0,1073,1945,2566,3630,4759,5082,5300,6301,
#Partially deleted in new
chr16	31700594	31707422	chr16:31700594-31707422	4	+	31700594	31700594	16724991	7	144,212,171,124,121,145,532,	0,2561,3625,4754,5077,5295,6296,
#Partially deleted in new
chr16	31700634	31707437	chr16:31700634-31707437	4	+	31700634	31700634	16724991	8	104,147,212,171,124,121,145,547,	0,1900,2521,3585,4714,5037,5255,6256,
#Deleted in new
chr16	31703167	31708581	chr16:31703167-31708581	5	+	31703167	31703167	16724991	10	196,236,86,114,68,75,70,86,251,121,	0,987,2181,2511,2722,2952,3373,3723,4789,5293,
#Deleted in new
chr16	31704279	31706018	chr16:31704279-31706018	4	+	31704279	31704279	16724991	3	111,124,347,	0,1069,1392,
#Deleted in new
chr16	31704727	31705260	chr16:31704727-31705260	3	+	31704727	31704727	8553170	1	533,	0,
#Deleted in new
chr16	31705669	31707351	chr16:31705669-31707351	4	+	31705669	31705669	16724991	4	123,105,34,461,	0,220,751,1221,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	31706962	31711986	chr16:31706962-31711986	5	+	31706962	31706962	16724991	2	37,4080,	0,944,
#Partially deleted in new
chr16	31709112	31711984	chr16:31709112-31711984	3	-	31709112	31709112	8553170	2	201,240,	0,2632,
#Partially deleted in new
chr16	31713228	31754536	chr16:31713228-31754536	0	+	31713432	31723273	789624	4	220,127,96,771,	0,9397,10029,40537,
#Partially deleted in new
chr16	31713231	31759841	chr16:31713231-31759841	1	+	31713432	31759376	789624	3	217,135,485,	0,40534,46125,
#Partially deleted in new
chr16	31713233	31761565	chr16:31713233-31761565	3	+	31713432	31759376	789624	5	202,127,96,135,2209,	0,9392,10024,40532,46123,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	31713244	31759886	chr16:31713244-31759886	0	+	31713432	31723273	789624	5	204,127,96,135,5432,	0,9381,10013,40521,41210,
#Partially deleted in new
chr16	31713246	31794869	chr16:31713246-31794869	0	+	31713246	31713246	8553170	5	189,135,101,77,1168,	0,40519,79383,80088,80455,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	31713268	31756094	chr16:31713268-31756094	0	+	31713432	31733533	789624	6	167,127,96,117,135,1640,	0,9357,9989,20242,40497,41186,
#Partially deleted in new
chr16	31713272	31754928	chr16:31713272-31754928	1	+	31713432	31754286	789624	2	176,1163,	0,40493,
#Partially deleted in new
chr16	31713272	31754795	chr16:31713272-31754795	0	+	31713272	31713272	8553170	3	163,135,341,	0,40493,41182,
#Partially deleted in new
chr16	31713276	31794155	chr16:31713276-31794155	1	+	31713432	31793877	789624	4	159,101,77,454,	0,79353,80058,80425,
#Partially deleted in new
chr16	31713286	31759553	chr16:31713286-31759553	0	+	31713286	31713286	8553170	3	149,135,197,	0,40479,46070,
#Partially deleted in new
chr16	31713292	31793707	chr16:31713292-31793707	0	+	31713292	31713292	8553170	6	143,135,110,101,77,6,	0,40473,46064,79337,80042,80409,
#Partially deleted in new
chr16	31713302	31753856	chr16:31713302-31753856	0	+	31713432	31753856	789624	5	205,51,127,96,91,	0,1064,9323,9955,40463,
#Partially deleted in new
chr16	31713305	31754484	chr16:31713305-31754484	0	+	31713432	31754484	789624	5	130,127,96,135,30,	0,9320,9952,40460,41149,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	31788201	31790993	chr16:31788201-31790993	3	+	31788201	31788201	8553170	1	2792,	0,
#Deleted in new
chr16	31801584	31802497	chr16:31801584-31802497	7	-	31801584	31801584	16724991	1	913,	0,
#Partially deleted in new
chr16	31802946	31807973	chr16:31802946-31807973	7	+	31802946	31802946	16724991	2	429,110,	0,4917,
#Partially deleted in new
chr16	31802962	31805921	chr16:31802962-31805921	4	+	31802962	31802962	16724991	2	413,138,	0,2821,
#Deleted in new
chr16	31805865	31806702	chr16:31805865-31806702	5	+	31805865	31805865	16724991	1	837,	0,
#Deleted in new
chr16	31807925	31808844	chr16:31807925-31808844	7	-	31807925	31807925	16724991	1	919,	0,
#Deleted in new
chr16	31863632	31864876	chr16:31863632-31864876	7	+	31863632	31863632	16724991	1	1244,	0,
#Deleted in new
chr16	31870886	31871124	chr16:31870886-31871124	7	-	31870886	31870886	16724991	1	238,	0,
#Partially deleted in new
chr16	31873757	31917357	chr16:31873757-31917357	3	+	31873966	31916481	789624	4	212,127,96,2882,	0,10740,11403,40718,
#Partially deleted in new
chr16	31873806	31914725	chr16:31873806-31914725	1	+	31873966	31890214	789624	5	163,127,96,44,250,	0,10691,11354,16400,40669,
#Partially deleted in new
chr16	31873830	31914558	chr16:31873830-31914558	0	+	31873830	31875217	789624	6	139,100,127,96,44,83,	0,1372,10667,11330,16376,40645,
#Partially deleted in new
chr16	31873832	31914527	chr16:31873832-31914527	0	+	31873832	31875163	789624	5	137,151,127,96,52,	0,1319,10665,11328,40643,
#Partially deleted in new
chr16	31874065	31914620	chr16:31874065-31914620	0	+	31884590	31914620	789624	4	199,127,96,145,	0,10432,11095,40410,
#Deleted in new
chr16	31894541	31894983	chr16:31894541-31894983	7	-	31894541	31894541	16724991	1	442,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	31911853	31916852	chr16:31911853-31916852	0	+	31911853	31911853	8553170	1	4999,	0,
#Deleted in new
chr16	31952159	31952473	chr16:31952159-31952473	7	+	31952159	31952159	16724991	1	314,	0,
#Deleted in new
chr16	31962062	31962381	chr16:31962062-31962381	7	+	31962062	31962062	16724991	1	319,	0,
#Deleted in new
chr16	31963802	31964079	chr16:31963802-31964079	7	+	31963802	31963802	16724991	1	277,	0,
#Partially deleted in new
chr16	31975802	32003728	chr16:31975802-32003728	7	+	31975802	31975802	16724991	10	159,108,341,202,122,156,90,126,109,257,	0,387,6069,8193,10538,11039,18995,19936,26942,27669,
#Partially deleted in new
chr16	31981869	31994485	chr16:31981869-31994485	4	+	31981869	31981869	16724991	8	320,62,131,122,156,79,160,42,	0,1863,2189,4471,4972,8512,12215,12574,
#Partially deleted in new
chr16	31981869	31986388	chr16:31981869-31986388	4	+	31981869	31981869	16724991	5	129,69,62,131,48,	0,251,1863,2189,4471,
#Partially deleted in new
chr16	31994820	31996076	chr16:31994820-31996076	4	+	31994820	31994820	16724991	2	67,338,	0,918,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	32008437	32084785	chr16:32008437-32084785	7	-	32008437	32008437	16724991	3	81,122,499,	0,10267,75849,
#Deleted in new
chr16	32034852	32035326	chr16:32034852-32035326	7	+	32034852	32034852	16724991	2	89,303,	0,171,
#Deleted in new
chr16	32051824	32052280	chr16:32051824-32052280	7	+	32051824	32051824	16724991	2	45,300,	0,156,
#Deleted in new
chr16	32059083	32059372	chr16:32059083-32059372	7	+	32059083	32059083	16724991	2	46,159,	0,130,
#Deleted in new
chr16	32066064	32066358	chr16:32066064-32066358	2	+	32066064	32066358	789624	1	294,	0,
#Deleted in new
chr16	32066064	32066352	chr16:32066064-32066352	1	+	32066064	32066352	789624	1	288,	0,
#Deleted in new
chr16	32084273	32084502	chr16:32084273-32084502	5	-	32084273	32084273	16724991	1	229,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	32103244	32152513	chr16:32103244-32152513	7	-	32103244	32103244	16724991	5	227,186,77,128,65,	0,13860,14142,15037,49204,
#Deleted in new
chr16	32116699	32116997	chr16:32116699-32116997	7	+	32116699	32116699	16724991	1	298,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	32151718	32152987	chr16:32151718-32152987	4	-	32151718	32151718	16724991	3	626,197,144,	0,730,1125,
#Partially deleted in new
chr16	32152110	32187070	chr16:32152110-32187070	5	-	32152110	32152110	16724991	24	535,141,187,155,19,197,188,206,152,143,158,134,222,128,133,211,151,104,174,194,172,110,70,73,	0,733,1699,4658,4875,5516,7045,13516,14424,14693,14931,15622,18426,18714,18949,19355,22272,23416,23904,27256,28474,29144,29753,34887,
#Deleted in new
chr16	32152113	32152994	chr16:32152113-32152994	4	-	32152113	32152113	16724991	2	231,151,	0,730,
#Deleted in new
chr16	32169983	32171567	chr16:32169983-32171567	4	-	32169983	32169983	16724991	4	749,128,133,102,	0,841,1076,1482,
#Partially deleted in new
chr16	32171133	32180675	chr16:32171133-32180675	4	-	32171133	32171133	16724991	7	59,211,151,104,156,175,56,	0,332,3249,4393,4881,8252,9486,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	32179399	32188107	chr16:32179399-32188107	5	-	32179399	32179399	16724991	7	161,137,110,130,322,103,99,	0,1220,1855,2411,2690,7603,8609,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	32185623	32186311	chr16:32185623-32186311	3	+	32185623	32185623	8553170	1	688,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	32188332	32193530	chr16:32188332-32193530	3	+	32188332	32188332	8553170	2	85,781,	0,4417,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	32189261	32189481	chr16:32189261-32189481	7	+	32189261	32189261	16724991	1	220,	0,
#Deleted in new
chr16	32199901	32202822	chr16:32199901-32202822	7	+	32199901	32199901	16724991	3	172,176,226,	0,2427,2695,
#Deleted in new
chr16	32213379	32213503	chr16:32213379-32213503	7	-	32213379	32213379	16724991	1	124,	0,
#Partially deleted in new
chr16	32250619	32254422	chr16:32250619-32254422	3	-	32250619	32250619	8553170	2	192,70,	0,3733,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	32252718	32255922	chr16:32252718-32255922	3	+	32253353	32254903	789624	2	997,1032,	0,2172,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	32253321	32255919	chr16:32253321-32255919	0	+	32253353	32253857	789624	4	394,167,290,1029,	0,499,1072,1569,
#Deleted in new
chr16	32253323	32255237	chr16:32253323-32255237	1	+	32253353	32254464	789624	2	268,844,	0,1070,
#Deleted in new
chr16	32253343	32254935	chr16:32253343-32254935	0	+	32253353	32254464	789624	3	248,290,45,	0,1050,1547,
#Deleted in new
chr16	32253835	32255634	chr16:32253835-32255634	0	+	32253835	32253857	789624	2	152,744,	0,1055,
#Deleted in new
chr16	32254051	32255214	chr16:32254051-32255214	0	+	32254051	32254051	8553170	3	47,290,324,	0,342,839,
#Deleted in new
chr16	32254211	32255065	chr16:32254211-32255065	0	+	32254211	32254211	8553170	2	472,175,	0,679,
#Deleted in new
chr16	32262826	32265514	chr16:32262826-32265514	3	-	32262826	32262826	8553170	2	716,1768,	0,920,
#Deleted in new
chr16	32262907	32263787	chr16:32262907-32263787	0	-	32262907	32262907	8553170	2	384,41,	0,839,
#Deleted in new
chr16	32278865	32279115	chr16:32278865-32279115	7	+	32278865	32278865	16724991	1	250,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	32289546	32310555	chr16:32289546-32310555	7	-	32289546	32289546	16724991	4	2104,90,167,244,	0,14523,15476,20765,
#Deleted in new
chr16	32289690	32289838	chr16:32289690-32289838	5	-	32289690	32289690	16724991	1	148,	0,
#Partially deleted in new
chr16	32356980	32363695	chr16:32356980-32363695	7	-	32356980	32356980	16724991	3	87,66,89,	0,1237,6626,
#Deleted in new
chr16	32379070	32380049	chr16:32379070-32380049	7	-	32379070	32379070	16724991	1	979,	0,
#Partially deleted in new
chr16	32388134	32436200	chr16:32388134-32436200	7	+	32388134	32388134	16724991	9	179,143,178,176,107,150,105,138,213,	0,2675,3923,16842,37641,38579,42548,43546,47853,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	32439068	32441159	chr16:32439068-32441159	7	-	32439068	32439068	16724991	2	1498,187,	0,1904,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	32454611	32458758	chr16:32454611-32458758	3	-	32454611	32454611	8553170	1	4147,	0,
#Deleted in new
chr16	32460265	32460362	chr16:32460265-32460362	7	-	32460265	32460265	16724991	1	97,	0,
#Partially deleted in new
chr16	32475050	32478250	chr16:32475050-32478250	7	-	32475050	32475050	16724991	4	243,122,80,160,	0,392,670,3040,
#Partially deleted in new
chr16	32600298	32608226	chr16:32600298-32608226	5	+	32600298	32600298	16724991	6	135,110,59,79,157,33,	0,2224,4607,5337,7229,7895,
#Partially deleted in new
chr16	32602574	32615639	chr16:32602574-32615639	7	+	32602574	32602574	16724991	7	123,59,71,31,38,66,58,	0,2331,5110,5619,12391,12846,13007,
#Partially deleted in new
chr16	32605819	32615571	chr16:32605819-32615571	4	+	32605819	32605819	16724991	5	83,71,25,61,151,	0,4056,4591,9123,9601,
#Deleted in new
chr16	32618732	32618852	chr16:32618732-32618852	7	+	32618732	32618732	16724991	1	120,	0,
#Deleted in new
chr16	32635672	32636045	chr16:32635672-32636045	7	-	32635672	32635672	16724991	1	373,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	32649192	32650401	chr16:32649192-32650401	1	+	32649192	32649192	8553170	3	136,136,86,	0,562,1123,
#Partially deleted in new
chr16	32650141	32663956	chr16:32650141-32663956	3	+	32650141	32650141	8553170	3	78,86,376,	0,174,13439,
#Deleted in new
chr16	32650194	32650763	chr16:32650194-32650763	7	-	32650194	32650194	16724991	2	183,90,	0,479,
#Deleted in new
chr16	32650675	32650910	chr16:32650675-32650910	5	-	32650675	32650675	16724991	1	235,	0,
#Deleted in new
chr16	32663924	32666533	chr16:32663924-32666533	3	+	32663924	32663924	8553170	2	1769,636,	0,1973,
#Deleted in new
chr16	32665652	32666533	chr16:32665652-32666533	0	+	32665652	32665652	8553170	2	41,385,	0,496,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	32673527	32676129	chr16:32673527-32676129	0	-	32675593	32676097	789624	4	1037,289,167,394,	0,1249,1936,2208,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	32673530	32676732	chr16:32673530-32676732	3	-	32674551	32676097	789624	2	1034,997,	0,2205,
#Deleted in new
chr16	32674087	32676022	chr16:32674087-32676022	0	-	32674923	32676022	789624	3	477,289,287,	0,689,1648,
#Deleted in new
chr16	32674217	32676127	chr16:32674217-32676127	1	-	32674994	32676097	789624	2	848,268,	0,1642,
#Deleted in new
chr16	32674240	32675399	chr16:32674240-32675399	0	-	32674240	32674240	8553170	3	324,289,47,	0,536,1112,
#Deleted in new
chr16	32674278	32675711	chr16:32674278-32675711	0	-	32674278	32674278	8553170	3	286,289,248,	0,498,1185,
#Deleted in new
chr16	32674389	32675239	chr16:32674389-32675239	0	-	32674389	32674389	8553170	2	175,463,	0,387,
#Deleted in new
chr16	32674657	32675621	chr16:32674657-32675621	0	-	32674657	32674657	8553170	2	408,158,	0,806,
#Partially deleted in new
chr16	32675036	32678831	chr16:32675036-32678831	3	+	32675036	32675036	8553170	2	70,192,	0,3603,
#Partially deleted in new
chr16	32715930	32716056	chr16:32715930-32716056	7	+	32715930	32715930	16724991	1	126,	0,
#Partially deleted in new
chr16	32726614	32729537	chr16:32726614-32729537	7	-	32726614	32726614	16724991	3	221,202,172,	0,287,2751,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	32735908	32741094	chr16:32735908-32741094	3	-	32735908	32735908	8553170	2	781,85,	0,5101,
#Partially deleted in new
chr16	32739626	32740166	chr16:32739626-32740166	7	-	32739626	32739626	16724991	2	34,192,	0,348,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	32741313	32753338	chr16:32741313-32753338	5	+	32741313	32741313	16724991	8	105,103,322,130,110,172,173,99,	0,1008,5703,6174,6750,7357,8557,11926,
#Partially deleted in new
chr16	32742352	32775368	chr16:32742352-32775368	7	+	32742352	32742352	16724991	24	72,130,110,172,173,172,104,151,211,133,128,196,134,158,143,152,192,188,193,155,182,148,197,231,	0,5135,5711,6318,7518,10889,11445,12542,15399,15883,16123,16343,17405,18072,18325,18585,19439,25922,27334,28234,31129,32138,32484,32785,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	32760942	32771598	chr16:32760942-32771598	4	+	32760942	32760942	16724991	5	147,192,108,188,1012,	0,849,4495,7332,9644,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	32774928	32776196	chr16:32774928-32776196	5	+	32774928	32774928	16724991	2	105,1059,	0,209,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	32781882	32784138	chr16:32781882-32784138	3	+	32781882	32781882	8553170	1	2256,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	32786393	32787379	chr16:32786393-32787379	3	+	32786393	32786393	8553170	1	986,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	32787961	32788944	chr16:32787961-32788944	3	+	32787961	32787961	8553170	1	983,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	32809555	32824645	chr16:32809555-32824645	3	+	32809555	32809555	8553170	4	110,77,186,228,	0,937,1110,14862,
#Partially deleted in new
chr16	32811028	32811251	chr16:32811028-32811251	7	-	32811028	32811028	16724991	1	223,	0,
#Partially deleted in new
chr16	32845963	32846180	chr16:32845963-32846180	7	-	32845963	32845963	16724991	1	217,	0,
#Partially deleted in new
chr16	32847712	32848156	chr16:32847712-32848156	3	+	32847712	32848156	789624	2	46,312,	0,132,
#Partially deleted in new
chr16	32869984	32873128	chr16:32869984-32873128	7	+	32869984	32869984	16724991	4	135,124,101,39,	0,1017,1966,3105,
#Partially deleted in new
chr16	32877468	32885142	chr16:32877468-32885142	7	-	32877468	32877468	16724991	9	374,172,171,101,103,124,1395,1173,233,	0,1356,1709,1962,2149,3009,3224,5062,7441,
#Partially deleted in new
chr16	32878705	32885501	chr16:32878705-32885501	5	-	32878705	32878705	16724991	13	291,171,101,103,149,99,124,104,135,133,250,132,266,	0,472,725,912,1091,1355,1772,1987,2178,3249,3825,4866,6530,
#Partially deleted in new
chr16	32882630	32885114	chr16:32882630-32885114	4	-	32882630	32882630	16724991	4	150,91,132,205,	0,436,941,2279,
#Partially deleted in new
chr16	32885193	32888874	chr16:32885193-32888874	3	+	32885193	32885193	8553170	5	64,213,125,223,1057,	0,1281,1856,2143,2624,
#Partially deleted in new
chr16	32886225	32888628	chr16:32886225-32888628	1	+	32886225	32886225	8553170	2	547,1292,	0,1111,
#Partially deleted in new
chr16	32886456	32887529	chr16:32886456-32887529	0	+	32886456	32886456	8553170	2	135,193,	0,880,
#Partially deleted in new
chr16	32903441	32903894	chr16:32903441-32903894	7	+	32903441	32903441	16724991	2	90,324,	0,129,
#Deleted in new
chr16	32915073	32915536	chr16:32915073-32915536	7	+	32915073	32915073	16724991	2	46,314,	0,149,
#Partially deleted in new
chr16	32916973	32946392	chr16:32916973-32946392	7	+	32916973	32916973	16724991	15	156,112,58,144,314,62,131,122,156,79,74,90,126,44,97,	0,380,703,2708,8458,10311,10637,12910,13404,16943,21003,21356,22294,28691,29322,
#Deleted in new
chr16	32931767	32932569	chr16:32931767-32932569	7	-	32931767	32931767	16724991	1	802,	0,
#Deleted in new
chr16	32978460	32978891	chr16:32978460-32978891	7	+	32978460	32978460	16724991	2	46,303,	0,128,
#Deleted in new
chr16	32995047	32995505	chr16:32995047-32995505	3	+	32995047	32995505	789624	2	46,304,	0,154,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	32995536	32996770	chr16:32995536-32996770	3	+	32995536	32995536	8553170	3	81,77,492,	0,254,742,
#Deleted in new
chr16	33002332	33002621	chr16:33002332-33002621	7	+	33002332	33002332	16724991	2	46,159,	0,130,
#Deleted in new
chr16	33009174	33009620	chr16:33009174-33009620	3	+	33009174	33009620	789624	2	46,303,	0,143,
#Deleted in new
chr16	33027544	33027761	chr16:33027544-33027761	5	-	33027544	33027544	16724991	1	217,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	33043608	33091589	chr16:33043608-33091589	3	-	33043608	33043608	8553170	2	530,291,	0,47690,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	33046528	33095431	chr16:33046528-33095431	1	-	33046528	33046528	8553170	5	229,186,77,128,65,	0,13747,14029,14928,48838,
#Deleted in new
chr16	33059935	33060098	chr16:33059935-33060098	7	+	33059935	33059935	16724991	1	163,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	33094203	33095471	chr16:33094203-33095471	5	-	33094203	33094203	16724991	2	1059,105,	0,1163,
#Partially deleted in new
chr16	33095028	33128086	chr16:33095028-33128086	7	-	33095028	33095028	16724991	24	234,205,203,169,152,177,181,196,152,135,158,101,145,98,130,211,145,104,156,173,137,110,130,103,	0,328,671,1709,4636,5498,6915,13392,14290,14552,14797,15488,16539,16776,16991,17417,20340,21478,21966,25336,26572,27206,27762,32955,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	33098807	33109465	chr16:33098807-33109465	4	-	33098807	33098807	16724991	5	1012,188,108,192,147,	0,3136,6053,9617,10511,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	33111681	33129090	chr16:33111681-33129090	5	-	33111681	33111681	16724991	14	31,128,133,211,151,104,156,173,137,110,130,322,103,99,	0,123,358,764,3681,4825,5313,8683,9919,10553,11109,11388,16302,17310,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	33129315	33134499	chr16:33129315-33134499	3	+	33129315	33129315	8553170	2	85,781,	0,4403,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	33130234	33130442	chr16:33130234-33130442	7	+	33130234	33130234	16724991	1	208,	0,
#Deleted in new
chr16	33140849	33143797	chr16:33140849-33143797	7	+	33140849	33140849	16724991	3	193,130,225,	0,2455,2723,
#Deleted in new
chr16	33154351	33154475	chr16:33154351-33154475	7	-	33154351	33154351	16724991	1	124,	0,
#Partially deleted in new
chr16	33191560	33195354	chr16:33191560-33195354	3	-	33191560	33191560	8553170	2	192,70,	0,3724,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	33193658	33196858	chr16:33193658-33196858	3	+	33194293	33195839	789624	2	997,1032,	0,2168,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	33194261	33196855	chr16:33194261-33196855	0	+	33194293	33194797	789624	4	394,167,289,1029,	0,499,1064,1565,
#Deleted in new
chr16	33194263	33196173	chr16:33194263-33196173	1	+	33194293	33195396	789624	2	268,848,	0,1062,
#Deleted in new
chr16	33194283	33195871	chr16:33194283-33195871	0	+	33194293	33195396	789624	3	248,289,45,	0,1042,1543,
#Deleted in new
chr16	33194769	33195733	chr16:33194769-33195733	0	+	33194769	33194769	8553170	2	158,408,	0,556,
#Deleted in new
chr16	33194991	33196150	chr16:33194991-33196150	0	+	33194991	33194991	8553170	3	47,289,324,	0,334,835,
#Deleted in new
chr16	33195166	33196236	chr16:33195166-33196236	0	+	33195166	33195166	8553170	2	448,410,	0,660,
#Deleted in new
chr16	33203772	33206462	chr16:33203772-33206462	3	-	33203772	33203772	8553170	2	717,1769,	0,921,
#Deleted in new
chr16	33203853	33204734	chr16:33203853-33204734	0	-	33203853	33203853	8553170	2	385,41,	0,840,
#Partially deleted in new
chr16	33206430	33330342	chr16:33206430-33330342	3	-	33206430	33206430	8553170	3	376,86,78,	0,123652,123834,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	33303738	33306935	chr16:33303738-33306935	3	+	33304373	33305919	789624	2	997,1029,	0,2168,
#Deleted in new
chr16	33304343	33306318	chr16:33304343-33306318	1	+	33304373	33305476	789624	2	268,913,	0,1062,
#Deleted in new
chr16	33345181	33345396	chr16:33345181-33345396	7	+	33345181	33345181	16724991	1	215,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	33360273	33363478	chr16:33360273-33363478	3	+	33360908	33362454	789624	2	997,1037,	0,2168,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	33360876	33363475	chr16:33360876-33363475	0	+	33360908	33361412	789624	4	394,167,289,1034,	0,499,1064,1565,
#Deleted in new
chr16	33360878	33362788	chr16:33360878-33362788	1	+	33360908	33362011	789624	2	268,848,	0,1062,
#Deleted in new
chr16	33361390	33363190	chr16:33361390-33363190	0	+	33361390	33361412	789624	2	152,749,	0,1051,
#Deleted in new
chr16	33361606	33362765	chr16:33361606-33362765	0	+	33361606	33361606	8553170	3	47,289,324,	0,334,835,
#Deleted in new
chr16	33370472	33371353	chr16:33370472-33371353	0	-	33370472	33370472	8553170	2	385,41,	0,840,
#Deleted in new
chr16	33370472	33372915	chr16:33370472-33372915	3	-	33370472	33370472	8553170	2	636,1603,	0,840,
#Deleted in new
chr16	33386104	33386349	chr16:33386104-33386349	7	+	33386104	33386104	16724991	1	245,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	33459044	33462246	chr16:33459044-33462246	3	+	33459679	33461225	789624	2	997,1034,	0,2168,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	33459649	33462249	chr16:33459649-33462249	1	+	33459679	33460782	789624	2	268,1538,	0,1062,
#Deleted in new
chr16	33484886	33485131	chr16:33484886-33485131	7	+	33484886	33484886	16724991	1	245,	0,
#Deleted in new
chr16	33495942	33496093	chr16:33495942-33496093	7	-	33495942	33495942	16724991	1	151,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	33533815	33534976	chr16:33533815-33534976	3	-	33533815	33533815	8553170	2	348,212,	0,949,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	33541841	33545812	chr16:33541841-33545812	3	-	33541841	33541841	8553170	1	3971,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	33548296	33554408	chr16:33548296-33554408	3	-	33548296	33548296	8553170	3	263,166,231,	0,1126,5881,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	33562648	33564346	chr16:33562648-33564346	5	-	33562648	33562648	16724991	2	470,84,	0,1614,
#Partially deleted in new
chr16	33563029	33570935	chr16:33563029-33570935	7	-	33563029	33563029	16724991	5	89,81,85,116,138,	0,1233,6093,7185,7768,
#Partially deleted in new
chr16	33577501	33622547	chr16:33577501-33622547	7	+	33577501	33577501	16724991	11	129,78,67,167,136,162,88,191,114,156,261,	0,10442,11360,15934,21428,21982,24717,28525,32788,34073,44785,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	33687024	33688081	chr16:33687024-33688081	5	-	33687024	33687024	16724991	2	533,81,	0,976,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	33687329	33698504	chr16:33687329-33698504	5	-	33687329	33687329	16724991	7	228,100,194,154,123,181,198,	0,1035,7610,8123,9192,10712,10977,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	33688221	33707213	chr16:33688221-33707213	7	-	33688221	33688221	16724991	10	243,176,148,123,59,181,71,172,74,32,	0,6718,7237,8300,9515,9820,10203,13019,13836,18960,
#Deleted in new
chr16	33694695	33696625	chr16:33694695-33696625	4	-	33694695	33694695	16724991	3	420,148,104,	0,763,1826,
#Partially deleted in new
chr16	33723355	33763773	chr16:33723355-33763773	7	-	33723355	33723355	16724991	19	73,29,73,29,40,68,60,67,67,31,73,29,73,29,73,29,68,137,107,	0,171,1890,2057,4872,8351,8837,11434,13764,16606,18425,18592,20299,20466,22180,22347,36190,38709,40311,
#Deleted in new
chr16	33769420	33769679	chr16:33769420-33769679	7	+	33769420	33769420	16724991	1	259,	0,
#Deleted in new
chr16	33771034	33771248	chr16:33771034-33771248	7	+	33771034	33771034	16724991	1	214,	0,
#Deleted in new
chr16	33802763	33803217	chr16:33802763-33803217	3	+	33802763	33803217	789624	2	46,307,	0,147,
#Deleted in new
chr16	33808777	33810767	chr16:33808777-33810767	7	+	33808777	33808777	16724991	1	1990,	0,
#Deleted in new
chr16	33827213	33827661	chr16:33827213-33827661	3	+	33827213	33827661	789624	2	46,307,	0,141,
#Deleted in new
chr16	33844783	33845229	chr16:33844783-33845229	3	-	33844783	33845229	789624	2	303,46,	0,400,
#Deleted in new
chr16	33848475	33848644	chr16:33848475-33848644	7	-	33848475	33848475	16724991	1	169,	0,
#Deleted in new
chr16	33851784	33852069	chr16:33851784-33852069	7	-	33851784	33851784	16724991	2	155,46,	0,239,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	33857934	33858864	chr16:33857934-33858864	3	-	33857934	33857934	8553170	3	188,77,81,	0,599,849,
#Deleted in new
chr16	33858895	33859352	chr16:33858895-33859352	7	-	33858895	33858895	16724991	2	303,46,	0,411,
#Deleted in new
chr16	33875038	33875468	chr16:33875038-33875468	7	-	33875038	33875038	16724991	2	303,45,	0,385,
#Partially deleted in new
chr16	33907418	33937024	chr16:33907418-33937024	7	-	33907418	33907418	16724991	15	143,44,126,90,74,79,156,122,131,62,314,144,58,112,282,	0,684,7000,7978,8348,12412,15874,16402,18668,19063,20664,26627,28719,28988,29324,
#Deleted in new
chr16	33936429	33937167	chr16:33936429-33937167	5	-	33936429	33936429	16724991	3	89,156,178,	0,313,560,
#Deleted in new
chr16	33938336	33938799	chr16:33938336-33938799	7	-	33938336	33938336	16724991	2	314,46,	0,417,
#Deleted in new
chr16	33948277	33948548	chr16:33948277-33948548	7	-	33948277	33948277	16724991	1	271,	0,
#Deleted in new
chr16	33949975	33950420	chr16:33949975-33950420	7	-	33949975	33949975	16724991	2	297,46,	0,399,
#Partially deleted in new
chr16	33964546	33976306	chr16:33964546-33976306	2	-	33964546	33964546	8553170	6	164,115,190,937,223,24,	0,1299,1499,8239,9434,11736,
#Deleted in new
chr16	33965654	33966091	chr16:33965654-33966091	7	-	33965654	33965654	16724991	2	306,46,	0,391,
#Deleted in new
chr16	33972911	33975277	chr16:33972911-33975277	1	-	33972911	33972911	8553170	2	1292,510,	0,1856,
#Deleted in new
chr16	33973046	33976346	chr16:33973046-33976346	1	-	33973046	33973046	8553170	5	676,223,125,213,64,	0,934,1319,1806,3236,
#Deleted in new
chr16	33974008	33975083	chr16:33974008-33975083	0	-	33974008	33974008	8553170	2	195,135,	0,940,
#Deleted in new
chr16	33976038	33987630	chr16:33976038-33987630	7	+	33976038	33976038	16724991	15	226,132,250,58,135,104,95,156,131,103,92,171,172,194,396,	0,1794,2717,3410,4479,4701,4925,5338,5570,5777,5966,6148,6500,7654,11196,
#Deleted in new
chr16	33988405	33991551	chr16:33988405-33991551	7	-	33988405	33988405	16724991	4	39,89,124,133,	0,1077,2003,3013,
#Deleted in new
chr16	34013393	34013830	chr16:34013393-34013830	7	-	34013393	34013393	16724991	2	305,46,	0,391,
#Deleted in new
chr16	34015259	34015477	chr16:34015259-34015477	7	+	34015259	34015259	16724991	1	218,	0,
#Deleted in new
chr16	34051139	34051363	chr16:34051139-34051363	7	+	34051139	34051139	16724991	1	224,	0,
#Deleted in new
chr16	34120469	34120677	chr16:34120469-34120677	7	+	34120469	34120469	16724991	1	208,	0,
#Deleted in new
chr16	34135735	34136792	chr16:34135735-34136792	7	-	34135735	34135735	16724991	1	1057,	0,
#Deleted in new
chr16	34139188	34139543	chr16:34139188-34139543	7	+	34139188	34139188	16724991	1	355,	0,
#Deleted in new
chr16	34141255	34142006	chr16:34141255-34142006	7	-	34141255	34141255	16724991	1	751,	0,
#Partially deleted in new
chr16	34142455	34142849	chr16:34142455-34142849	7	+	34142455	34142455	16724991	1	394,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	34158584	34160036	chr16:34158584-34160036	3	-	34158584	34158584	5263520	1	1452,	0,
#Deleted in new
chr16	34162958	34163110	chr16:34162958-34163110	7	+	34162958	34162958	16724991	1	152,	0,
#Deleted in new
chr16	34266040	34268649	chr16:34266040-34268649	7	-	34266040	34266040	16724991	1	2609,	0,
#Partially deleted in new
chr16	34353615	34371659	chr16:34353615-34371659	7	-	34353615	34353615	16724991	7	69,163,167,120,52,36,96,	0,1951,6817,11043,11749,14935,17948,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	34941976	34943880	chr16:34941976-34943880	3	+	34941976	34941976	8553170	1	1904,	0,
#Deleted in new
chr16	34978743	34979844	chr16:34978743-34979844	3	-	34978743	34978743	8553170	2	448,104,	0,997,
#Deleted in new
chr16	35021748	35024229	chr16:35021748-35024229	3	+	35021748	35021748	8553170	1	2481,	0,
#Deleted in new
chr16	35022850	35024250	chr16:35022850-35024250	3	-	35022850	35022850	8553170	2	224,490,	0,910,
#Deleted in new
chr16	35023338	35023765	chr16:35023338-35023765	7	+	35023338	35023338	16724991	1	427,	0,
#Partially deleted in new
chr16	35040163	35084313	chr16:35040163-35084313	7	+	35040163	35040163	16724991	9	101,52,111,167,160,42,44,198,123,	0,6248,6886,11065,15938,25960,26889,42072,44027,
#Partially deleted in new
chr16	35068210	35085060	chr16:35068210-35085060	7	+	35068210	35068210	16724991	8	172,173,149,97,128,89,128,90,	0,14050,15187,15536,15750,16016,16431,16760,
#Deleted in new
chr16	35085895	35086119	chr16:35085895-35086119	7	+	35085895	35085895	16724991	1	224,	0,
#Partially deleted in new
chr16	35090500	35104834	chr16:35090500-35104834	7	+	35090500	35090500	16724991	11	100,97,123,183,214,84,110,96,149,207,155,	0,1434,2109,2760,4449,6214,6900,11084,11281,13573,14179,
#Deleted in new
chr16	35118237	35118956	chr16:35118237-35118956	7	-	35118237	35118237	16724991	1	719,	0,
#Deleted in new
chr16	35134513	35135075	chr16:35134513-35135075	7	+	35134513	35134513	16724991	1	562,	0,
#Deleted in new
chr16	35143721	35144881	chr16:35143721-35144881	3	+	35143721	35143721	8553170	2	242,461,	0,699,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	35148635	35154366	chr16:35148635-35154366	3	+	35148635	35148635	8553170	1	5731,	0,
#Partially deleted in new
chr16	35169691	35170241	chr16:35169691-35170241	7	-	35169691	35169691	16724991	1	550,	0,
#Partially deleted in new
chr16	35173315	35174093	chr16:35173315-35174093	7	+	35173315	35173315	16724991	1	778,	0,
#Partially deleted in new
chr16	35192686	35195661	chr16:35192686-35195661	3	-	35192686	35192686	8553170	1	2975,	0,
#Partially deleted in new
chr16	35193334	35193734	chr16:35193334-35193734	7	+	35193334	35193334	16724991	1	400,	0,
#Partially deleted in new
chr16	35195778	35197544	chr16:35195778-35197544	3	+	35195778	35195778	789624	1	1766,	0,
#Partially deleted in new
chr16	35207902	35208236	chr16:35207902-35208236	7	-	35207902	35207902	16724991	1	334,	0,
#Partially deleted in new
chr16	35207936	35284146	chr16:35207936-35284146	3	+	35207936	35207936	8553170	2	85,391,	0,75819,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	35207958	35253649	chr16:35207958-35253649	1	+	35207958	35207958	8553170	4	63,119,255,412,	0,40724,44922,45279,
#Partially deleted in new
chr16	35221582	35222048	chr16:35221582-35222048	7	-	35221582	35221582	16724991	1	466,	0,
#Partially deleted in new
chr16	35232411	35235984	chr16:35232411-35235984	7	-	35232411	35232411	16724991	2	695,191,	0,3382,
#Deleted in new
chr16	35245915	35247534	chr16:35245915-35247534	7	-	35245915	35245915	16724991	4	506,78,72,176,	0,798,1108,1443,
#Deleted in new
chr16	35255191	35255633	chr16:35255191-35255633	7	-	35255191	35255191	16724991	1	442,	0,
#Deleted in new
chr16	35258629	35259629	chr16:35258629-35259629	7	+	35258629	35258629	16724991	1	1000,	0,
#Deleted in new
chr16	35335276	35336889	chr16:35335276-35336889	7	-	35335276	35335276	16724991	4	500,78,75,179,	0,789,1095,1434,
#Deleted in new
chr16	35344090	35344559	chr16:35344090-35344559	7	-	35344090	35344090	16724991	1	469,	0,
#Deleted in new
chr16	35347384	35348297	chr16:35347384-35348297	7	+	35347384	35347384	16724991	1	913,	0,
#Deleted in new
chr16	35352481	35353022	chr16:35352481-35353022	7	+	35352481	35352481	16724991	1	541,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	35363411	35382466	chr16:35363411-35382466	0	+	35363411	35363411	8553170	5	117,144,242,119,43,	0,13094,15160,16557,19012,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	35363530	35390584	chr16:35363530-35390584	3	+	35363530	35363530	789624	9	300,144,242,119,668,130,145,171,882,	0,12975,15041,16438,18063,18938,19180,22348,26172,
#Deleted in new
chr16	35384143	35385086	chr16:35384143-35385086	7	-	35384143	35384143	16724991	2	416,199,	0,744,
#Deleted in new
chr16	35389202	35390003	chr16:35389202-35390003	7	-	35389202	35389202	16724991	1	801,	0,
#Deleted in new
chr16	35405746	35407349	chr16:35405746-35407349	7	-	35405746	35405746	16724991	4	500,72,50,159,	0,812,1135,1444,
#Deleted in new
chr16	35414278	35414747	chr16:35414278-35414747	7	-	35414278	35414278	16724991	1	469,	0,
#Deleted in new
chr16	35420290	35421209	chr16:35420290-35421209	7	+	35420290	35420290	16724991	1	919,	0,
#Deleted in new
chr16	35425363	35426483	chr16:35425363-35426483	7	+	35425363	35425363	16724991	1	1120,	0,
#Deleted in new
chr16	35435302	35436341	chr16:35435302-35436341	7	-	35435302	35435302	16724991	2	95,186,	0,853,
#Deleted in new
chr16	35446897	35448146	chr16:35446897-35448146	5	-	35446897	35446897	16724991	1	1249,	0,
#Deleted in new
chr16	35447851	35449411	chr16:35447851-35449411	7	-	35447851	35447851	16724991	3	171,177,113,	0,1087,1447,
#Deleted in new
chr16	35477413	35480458	chr16:35477413-35480458	7	-	35477413	35477413	16724991	2	1281,289,	0,2756,
#Deleted in new
chr16	35477978	35480481	chr16:35477978-35480481	5	-	35477978	35477978	16724991	4	350,78,100,324,	0,638,1286,2179,
#Deleted in new
chr16	35478616	35479439	chr16:35478616-35479439	5	-	35478616	35478616	16724991	3	78,70,175,	0,305,648,
#Deleted in new
chr16	35485765	35486225	chr16:35485765-35486225	7	-	35485765	35485765	16724991	1	460,	0,
#Deleted in new
chr16	35489236	35490212	chr16:35489236-35490212	7	+	35489236	35489236	16724991	1	976,	0,
#Deleted in new
chr16	35491173	35492395	chr16:35491173-35492395	3	-	35491173	35491173	8553170	2	330,150,	0,1072,
#Deleted in new
chr16	35492323	35493446	chr16:35492323-35493446	7	+	35492323	35492323	16724991	1	1123,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	35493753	35496457	chr16:35493753-35496457	3	-	35493753	35493753	8553170	3	444,47,81,	0,1788,2623,
#Deleted in new
chr16	35505092	35506462	chr16:35505092-35506462	3	-	35505092	35505092	8553170	2	322,137,	0,1233,
#Deleted in new
chr16	35506591	35506937	chr16:35506591-35506937	5	-	35506591	35506591	16724991	1	346,	0,
#Deleted in new
chr16	35506591	35507170	chr16:35506591-35507170	7	-	35506591	35506591	16724991	1	579,	0,
#Deleted in new
chr16	35528366	35529318	chr16:35528366-35529318	7	-	35528366	35528366	16724991	1	952,	0,
#Deleted in new
chr16	35543278	35543645	chr16:35543278-35543645	7	-	35543278	35543278	16724991	1	367,	0,
#Deleted in new
chr16	35547916	35548829	chr16:35547916-35548829	7	+	35547916	35547916	16724991	1	913,	0,
#Deleted in new
chr16	35552908	35554001	chr16:35552908-35554001	7	+	35552908	35552908	16724991	1	1093,	0,
#Deleted in new
chr16	35574833	35575494	chr16:35574833-35575494	7	+	35574833	35574833	16724991	1	661,	0,
#Partially deleted in new
chr16	35636686	35645180	chr16:35636686-35645180	7	-	35636686	35636686	16724991	14	134,78,78,522,190,100,82,74,180,177,84,105,163,297,	0,342,926,1948,2747,4213,4770,4992,5717,6041,6308,6628,7409,8197,
#Deleted in new
chr16	35640028	35640582	chr16:35640028-35640582	3	+	35640028	35640028	8553170	1	554,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	35722267	35722529	chr16:35722267-35722529	7	-	35722267	35722267	16724991	1	262,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	35734392	35734504	chr16:35734392-35734504	7	+	35734392	35734392	16724991	1	112,	0,
#Deleted in new
chr16	35734638	35734748	chr16:35734638-35734748	7	+	35734638	35734638	16724991	1	110,	0,
#Deleted in new
chr16	35735371	35735471	chr16:35735371-35735471	7	+	35735371	35735371	16724991	1	100,	0,
#Deleted in new
chr16	35735624	35735733	chr16:35735624-35735733	7	+	35735624	35735624	16724991	1	109,	0,
#Deleted in new
chr16	35745988	35746094	chr16:35745988-35746094	7	+	35745988	35745988	16724991	1	106,	0,
#Deleted in new
chr16	35746522	35746636	chr16:35746522-35746636	7	+	35746522	35746522	16724991	1	114,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	35746551	35756515	chr16:35746551-35756515	1	+	35746551	35746551	5263520	3	275,77,1137,	0,2209,8827,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	35746771	35746894	chr16:35746771-35746894	7	+	35746771	35746771	16724991	1	123,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	35747031	35747140	chr16:35747031-35747140	7	+	35747031	35747031	16724991	1	109,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	35748356	35755796	chr16:35748356-35755796	0	+	35748356	35748356	8553170	3	231,77,418,	0,404,7022,
#Deleted in new
chr16	35748519	35748655	chr16:35748519-35748655	7	+	35748519	35748519	16724991	1	136,	0,
#Deleted in new
chr16	35750060	35750175	chr16:35750060-35750175	7	+	35750060	35750060	16724991	1	115,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	35751573	35751684	chr16:35751573-35751684	7	+	35751573	35751573	16724991	1	111,	0,
#Deleted in new
chr16	35751827	35751935	chr16:35751827-35751935	7	+	35751827	35751827	16724991	1	108,	0,
#Deleted in new
chr16	35752825	35752942	chr16:35752825-35752942	7	+	35752825	35752825	16724991	1	117,	0,
#Deleted in new
chr16	35753795	35753930	chr16:35753795-35753930	7	+	35753795	35753795	16724991	1	135,	0,
#Deleted in new
chr16	35754045	35754182	chr16:35754045-35754182	7	+	35754045	35754045	16724991	1	137,	0,
#Deleted in new
chr16	35754554	35754688	chr16:35754554-35754688	7	+	35754554	35754554	16724991	1	134,	0,
#Deleted in new
chr16	35754922	35755033	chr16:35754922-35755033	7	+	35754922	35754922	16724991	1	111,	0,
#Deleted in new
chr16	35755176	35755285	chr16:35755176-35755285	7	+	35755176	35755176	16724991	1	109,	0,
#Deleted in new
chr16	35785568	35786887	chr16:35785568-35786887	3	-	35785568	35785568	8553170	1	1319,	0,
#Partially deleted in new
chr16	35802868	35803280	chr16:35802868-35803280	7	-	35802868	35802868	16724991	1	412,	0,
#Partially deleted in new
chr16	35836885	35837732	chr16:35836885-35837732	7	+	35836885	35836885	16724991	1	847,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	35879035	35879498	chr16:35879035-35879498	7	-	35879035	35879035	16724991	1	463,	0,
#Deleted in new
chr16	35912119	35912516	chr16:35912119-35912516	7	+	35912119	35912119	16724991	1	397,	0,
#Partially deleted in new
chr16	46469661	46478487	chr16:46469661-46478487	4	-	46469661	46469661	16724991	3	418,81,159,	0,4587,8667,
#Partially deleted in new
chr16	46471538	46569097	chr16:46471538-46569097	7	-	46471538	46471538	16724991	17	390,81,229,215,288,147,954,74,491,73,31,54,68,104,174,115,433,	0,2710,4227,6790,7593,26566,28397,34635,46371,56736,59565,78942,82428,88409,92312,92646,97126,
#Partially deleted in new
chr16	46474121	46478439	chr16:46474121-46478439	4	-	46474121	46474121	16724991	3	208,229,111,	0,1644,4207,
#Partially deleted in new
chr16	46500558	46518054	chr16:46500558-46518054	4	-	46500558	46500558	16724991	4	331,74,39,145,	0,5615,14283,17351,
#Partially deleted in new
chr16	46518304	46568915	chr16:46518304-46568915	5	-	46518304	46518304	16724991	9	96,73,31,54,68,104,174,115,251,	0,9970,12799,32176,35662,41643,45546,45880,50360,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	46556088	46556191	chr16:46556088-46556191	3	-	46556088	46556088	8553170	1	103,	0,
#Deleted in new
chr16	46571536	46572136	chr16:46571536-46572136	7	+	46571536	46571536	16724991	1	600,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	46573762	46575094	chr16:46573762-46575094	7	+	46573762	46573762	16724991	2	328,405,	0,927,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	46580553	46621626	chr16:46580553-46621626	3	-	46581728	46621359	789624	13	1501,142,87,119,132,121,169,234,93,209,116,168,370,	0,2962,3449,14998,19277,22985,23421,23674,27743,35392,37080,37651,40703,
#Partially deleted in new
chr16	46581912	46584253	chr16:46581912-46584253	0	-	46581912	46581912	8553170	3	142,142,251,	0,1603,2090,
#Partially deleted in new
chr16	46595623	46603844	chr16:46595623-46603844	0	-	46595623	46595623	8553170	3	47,132,306,	0,4207,7915,
#Partially deleted in new
chr16	46599928	46615993	chr16:46599928-46615993	0	-	46599928	46615993	789624	5	34,121,169,93,48,	0,3610,4046,8368,16017,
#Partially deleted in new
chr16	46603593	46621368	chr16:46603593-46621368	0	-	46603593	46603593	8553170	7	550,234,93,209,116,168,112,	0,634,4703,12352,14040,14611,17663,
#Partially deleted in new
chr16	46603989	46615983	chr16:46603989-46615983	0	-	46603989	46603989	8553170	3	472,93,38,	0,4307,11956,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	46620465	46621351	chr16:46620465-46621351	0	-	46620465	46620465	8553170	2	435,95,	0,791,
#Deleted in new
chr16	46622860	46624443	chr16:46622860-46624443	1	-	46622860	46622860	8553170	2	1020,87,	0,1496,
#Deleted in new
chr16	46622860	46624451	chr16:46622860-46624451	3	-	46622860	46622860	8553170	1	1591,	0,
#Deleted in new
chr16	46626403	46626992	chr16:46626403-46626992	7	-	46626403	46626403	16724991	1	589,	0,
#Deleted in new
chr16	46649125	46649849	chr16:46649125-46649849	7	+	46649125	46649125	16724991	2	218,180,	0,544,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr16	46656131	46689192	chr16:46656131-46689192	3	-	46660471	46689133	0	17	4520,144,240,180,123,156,208,149,97,110,84,214,183,124,97,99,62,	0,5586,6111,6851,12798,15573,16133,18182,18432,20451,21183,22811,24539,25245,25947,27376,32999,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr16	46658076	46689194	chr16:46658076-46689194	0	-	46682642	46689133	789624	18	2575,144,240,180,123,156,208,149,97,110,84,214,183,124,97,207,99,64,	0,3641,4166,4906,10853,13628,14188,16237,16487,18506,19238,20866,22594,23300,24002,24401,25431,31054,
#Partially deleted in new
chr16	46659676	46689147	chr16:46659676-46689147	0	-	46688986	46689133	789624	17	975,144,240,180,123,156,208,149,97,110,84,214,183,124,97,99,834,	0,2041,2566,3306,9253,12028,12588,14637,14887,16906,17638,19266,20994,21700,22402,23831,28637,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	46660695	46661591	chr16:46660695-46661591	3	-	46660695	46660695	8553170	2	258,63,	0,833,
#Partially deleted in new
chr16	46661826	46669214	chr16:46661826-46669214	0	-	46661826	46661826	8553170	4	35,240,180,285,	0,416,1156,7103,
#Partially deleted in new
chr16	46672417	46679043	chr16:46672417-46679043	0	-	46672417	46672417	8553170	5	55,97,110,84,101,	0,2146,4165,4897,6525,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	46673442	46673927	chr16:46673442-46673927	3	-	46673442	46673442	8553170	1	485,	0,
#Partially deleted in new
chr16	46676504	46689518	chr16:46676504-46689518	0	-	46676504	46676504	8553170	7	188,84,214,183,144,99,184,	0,810,2438,4166,4872,7003,12830,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	46676577	46677686	chr16:46676577-46677686	0	-	46676577	46676577	8553170	2	115,372,	0,737,
#Deleted in new
chr16	46680674	46681956	chr16:46680674-46681956	0	-	46680674	46680674	8553170	2	179,580,	0,702,
#Partially deleted in new
chr16	46680686	46689151	chr16:46680686-46689151	0	-	46682642	46689133	789624	6	167,124,97,189,99,21,	0,690,1392,1791,2821,8444,
#Deleted in new
chr16	46681755	46683607	chr16:46681755-46683607	0	-	46681755	46681755	8553170	2	420,100,	0,1752,
#Deleted in new
chr16	46682642	46683606	chr16:46682642-46683606	1	-	46682642	46683606	789624	2	42,99,	0,865,
#Partially deleted in new
chr16	46682881	46689180	chr16:46682881-46689180	0	-	46682881	46682881	8553170	2	725,50,	0,6249,
#Partially deleted in new
chr16	46689642	46697511	chr16:46689642-46697511	0	+	46689705	46691103	789624	7	128,63,164,90,113,69,54,	0,1415,2739,3450,5919,6374,7815,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	46689645	46698394	chr16:46689645-46698394	3	+	46689705	46697585	0	7	125,130,164,90,113,69,937,	0,1345,2736,3447,5916,6371,7812,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	46689658	46694519	chr16:46689658-46694519	0	+	46689658	46689658	8553170	4	112,130,164,1427,	0,1332,2723,3434,
#Partially deleted in new
chr16	46689681	46696219	chr16:46689681-46696219	0	+	46689681	46689681	8553170	5	148,130,164,90,658,	0,1309,2700,3411,5880,
#Partially deleted in new
chr16	46689696	46697818	chr16:46689696-46697818	1	+	46689705	46696071	789624	6	74,130,164,90,69,361,	0,1294,2685,3396,6320,7761,
#Partially deleted in new
chr16	46689706	46695051	chr16:46689706-46695051	0	+	46689706	46689706	8553170	5	64,130,164,90,113,	0,1284,2675,3386,5232,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	46690785	46698385	chr16:46690785-46698385	1	+	46691072	46697585	789624	6	335,164,90,113,69,928,	0,1596,2307,4776,5231,6672,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	46694936	46697898	chr16:46694936-46697898	0	+	46694936	46694936	8553170	4	148,113,69,441,	0,625,1080,2521,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	46695108	46698382	chr16:46695108-46698382	0	+	46695108	46695108	8553170	3	566,69,925,	0,908,2349,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	46703368	46748309	chr16:46703368-46748309	3	-	46707703	46748193	789624	13	4395,133,153,129,71,142,110,94,106,461,433,91,593,	0,6170,7268,9279,17754,23867,25655,26225,27224,28839,34342,36688,44348,
#Partially deleted in new
chr16	46707665	46763246	chr16:46707665-46763246	1	-	46707703	46732646	789624	12	98,133,153,129,71,142,110,94,106,461,91,207,	0,1873,2971,4982,13457,19570,21358,21928,22927,24542,32391,55374,
#Partially deleted in new
chr16	46707667	46710987	chr16:46707667-46710987	0	-	46707667	46707667	8553170	3	96,133,351,	0,1871,2969,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	46707691	46711790	chr16:46707691-46711790	0	-	46707691	46707691	8553170	4	72,133,153,204,	0,1847,2945,3895,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	46725775	46738137	chr16:46725775-46738137	0	-	46725775	46725775	8553170	6	1602,110,94,106,461,427,	0,3248,3818,4817,6432,11935,
#Partially deleted in new
chr16	46727237	46729937	chr16:46727237-46729937	0	-	46727237	46727237	8553170	3	140,110,344,	0,1786,2356,
#Partially deleted in new
chr16	46738037	46790407	chr16:46738037-46790407	0	-	46738037	46738037	8553170	3	106,91,292,	0,2019,52078,
#Partially deleted in new
chr16	46789897	46792040	chr16:46789897-46792040	7	+	46789897	46789897	16724991	2	1502,334,	0,1809,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	46796606	46831162	chr16:46796606-46831162	1	-	46802951	46831149	789624	3	6464,97,79,	0,27779,34477,
#Partially deleted in new
chr16	46802093	46831411	chr16:46802093-46831411	3	-	46802951	46831149	789624	4	977,183,97,328,	0,7509,22292,28990,
#Partially deleted in new
chr16	46802717	46831068	chr16:46802717-46831068	0	-	46808009	46831068	789624	5	353,166,183,97,80,	0,5251,6885,21668,28271,
#Partially deleted in new
chr16	46803002	46830759	chr16:46803002-46830759	0	-	46803002	46803002	8553170	4	68,183,97,125,	0,6600,21383,27632,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	46842631	46844618	chr16:46842631-46844618	7	-	46842631	46842631	16724991	2	198,888,	0,1099,
#Deleted in new
chr16	46850998	46851254	chr16:46850998-46851254	7	+	46850998	46850998	16724991	1	256,	0,
#Partially deleted in new
chr16	46884377	46931297	chr16:46884377-46931297	3	+	46884715	46928997	0	12	90,265,90,109,134,244,80,137,175,156,113,2391,	0,316,13270,16304,22464,25306,32250,34243,37864,40011,42547,44529,
#Partially deleted in new
chr16	46884694	46909874	chr16:46884694-46909874	0	+	46884715	46909874	789624	5	30,90,109,134,191,	0,12953,15987,22147,24989,
#Partially deleted in new
chr16	46884834	46931288	chr16:46884834-46931288	1	+	46897704	46928997	0	12	497,111,90,109,134,244,80,137,175,156,113,2382,	0,632,12813,15847,22007,24849,31793,33786,37407,39554,42090,44072,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	46915297	46929007	chr16:46915297-46929007	0	+	46915297	46915297	8553170	6	1410,137,175,156,113,101,	0,3323,6944,9091,11627,13609,
#Partially deleted in new
chr16	46923832	46931286	chr16:46923832-46931286	0	+	46923832	46923832	8553170	3	712,113,2380,	0,3092,5074,
#Partially deleted in new
chr16	46955361	46973788	chr16:46955361-46973788	3	-	46957028	46973572	789624	9	1859,128,145,197,134,81,224,60,294,	0,3641,3913,9249,12151,12722,15987,16534,18133,
#Partially deleted in new
chr16	46956621	46973664	chr16:46956621-46973664	0	-	46971653	46973572	789624	9	599,128,145,197,134,81,311,60,170,	0,2381,2653,7989,10891,11462,14727,15274,16873,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	46958562	46959611	chr16:46958562-46959611	0	-	46958562	46958562	8553170	2	568,337,	0,712,
#Partially deleted in new
chr16	46964732	46972943	chr16:46964732-46972943	0	-	46964732	46971461	789624	4	75,134,81,1595,	0,2780,3351,6616,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	46973988	46978983	chr16:46973988-46978983	3	+	46973988	46973988	8553170	2	137,379,	0,4616,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	47004512	47035385	chr16:47004512-47035385	3	+	47004512	47004512	8553170	3	256,96,392,	0,24718,30481,
#Deleted in new
chr16	47013956	47014365	chr16:47013956-47014365	7	+	47013956	47013956	16724991	1	409,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	47077702	47143997	chr16:47077702-47143997	3	-	47083220	47143612	789624	9	6099,114,229,128,45,249,141,57,419,	0,8523,31780,44954,45165,50622,51521,54266,65876,
#Partially deleted in new
chr16	47081633	47143709	chr16:47081633-47143709	1	-	47083220	47143612	789624	9	2168,114,229,128,24,249,141,57,131,	0,4592,27849,41023,41255,46691,47590,50335,61945,
#Partially deleted in new
chr16	47082989	47128458	chr16:47082989-47128458	0	-	47083220	47128458	789624	5	812,229,128,24,134,	0,26493,39667,39899,45335,
#Partially deleted in new
chr16	47083106	47109634	chr16:47083106-47109634	0	-	47083220	47109634	789624	2	695,104,	0,26424,
#Partially deleted in new
chr16	47083613	47122903	chr16:47083613-47122903	0	-	47083613	47122903	789624	4	188,229,128,36,	0,25869,39043,39254,
#Partially deleted in new
chr16	47144322	47162747	chr16:47144322-47162747	0	+	47144322	47144322	789624	4	172,50,42,197,	0,13232,17226,18228,
#Partially deleted in new
chr16	47144443	47162736	chr16:47144443-47162736	3	+	47144443	47144443	789624	5	51,165,50,42,186,	0,9188,13111,17105,18107,
#Deleted in new
chr16	47150131	47150566	chr16:47150131-47150566	7	-	47150131	47150131	16724991	1	435,	0,
#Partially deleted in new
chr16	47154386	47461274	chr16:47154386-47461274	3	-	47155718	47461045	789624	18	1392,118,83,125,79,44,109,151,173,95,82,65,95,75,58,146,73,437,	0,4486,7363,8153,64481,83578,104245,106158,156853,159342,211401,221489,274417,297009,298346,299626,304716,306451,
#Partially deleted in new
chr16	47154386	47312275	chr16:47154386-47312275	0	-	47154386	47154386	8553170	10	1392,118,83,125,79,44,109,151,173,362,	0,4486,7363,8153,64481,83578,104245,106158,156853,157527,
#Partially deleted in new
chr16	47155300	47311950	chr16:47155300-47311950	0	-	47155300	47155300	8553170	10	478,118,83,125,79,44,109,151,173,62,	0,3572,6449,7239,63567,82664,103331,105244,155939,156588,
#Partially deleted in new
chr16	47155556	47396220	chr16:47155556-47396220	0	-	47155556	47155556	8553170	13	222,118,83,125,79,44,109,151,173,95,82,65,118,	0,3316,6193,6983,63311,82408,103075,104988,155683,158172,210231,220319,240546,
#Partially deleted in new
chr16	47155584	47238289	chr16:47155584-47238289	0	-	47155584	47155584	8553170	6	194,118,83,125,79,325,	0,3288,6165,6955,63283,82380,
#Partially deleted in new
chr16	47155604	47461274	chr16:47155604-47461274	1	-	47155767	47454100	789624	18	174,62,83,125,79,44,109,151,173,95,82,65,95,75,58,146,73,160,	0,3268,6145,6935,63263,82360,103027,104940,155635,158124,210183,220271,273199,295791,297128,298408,303498,305510,
#Partially deleted in new
chr16	47155671	47258722	chr16:47155671-47258722	0	-	47155718	47258722	789624	7	107,118,83,62,79,44,91,	0,3201,6078,6868,63196,82293,102960,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	47196310	47202429	chr16:47196310-47202429	3	+	47196310	47196310	8553170	2	409,355,	0,5764,
#Deleted in new
chr16	47218025	47218768	chr16:47218025-47218768	3	+	47218025	47218025	8553170	1	743,	0,
#Partially deleted in new
chr16	47260659	47263014	chr16:47260659-47263014	0	-	47260659	47260659	8553170	2	36,248,	0,2107,
#Deleted in new
chr16	47262740	47263500	chr16:47262740-47263500	7	+	47262740	47262740	16724991	1	760,	0,
#Partially deleted in new
chr16	47299446	47317814	chr16:47299446-47317814	3	+	47299446	47299446	8553170	3	502,102,266,	0,13192,18102,
#Deleted in new
chr16	47313026	47313121	chr16:47313026-47313121	3	-	47313026	47313026	8553170	1	95,	0,
#Partially deleted in new
chr16	47365570	47452757	chr16:47365570-47452757	0	-	47365570	47365570	8553170	5	299,65,95,75,25,	0,10305,63233,85825,87162,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	47425783	47459169	chr16:47425783-47459169	0	-	47425783	47425783	8553170	6	565,95,75,58,146,67,	0,3020,25612,26949,28229,33319,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	47448097	47459130	chr16:47448097-47459130	0	-	47450419	47459130	789624	5	2356,75,58,146,28,	0,3298,4635,5915,11005,
#Partially deleted in new
chr16	47451395	47464149	chr16:47451395-47464149	0	-	47451395	47454100	789624	5	75,58,146,73,198,	0,1337,2617,7707,12556,
#Partially deleted in new
chr16	47461122	47547547	chr16:47461122-47547547	0	+	47463938	47547547	789624	8	304,95,90,139,100,108,81,115,	0,2776,36276,38633,41868,50542,54398,86310,
#Partially deleted in new
chr16	47461294	47699745	chr16:47461294-47699745	1	+	47463938	47699366	789624	32	132,112,90,139,100,108,81,116,64,96,198,58,78,159,95,56,94,84,105,83,91,62,163,82,58,91,203,135,130,108,141,517,	0,2587,36104,38461,41696,50370,54226,86138,119000,126373,127610,132205,132842,135078,149531,179740,180304,187238,187805,189249,189536,199211,199362,200424,202382,204647,207920,227746,232083,235086,237153,237934,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr16	47461325	47701523	chr16:47461325-47701523	1	+	47461350	47699366	789624	31	101,90,139,100,108,81,116,64,96,198,58,78,159,95,56,94,84,105,83,91,62,163,82,58,91,203,135,130,108,141,2295,	0,36073,38430,41665,50339,54195,86107,118969,126342,127579,132174,132811,135047,149500,179709,180273,187207,187774,189218,189505,199180,199331,200393,202351,204616,207889,227715,232052,235055,237122,237903,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr16	47461326	47700343	chr16:47461326-47700343	3	+	47461350	47699366	789624	31	100,90,139,100,108,81,116,64,96,198,58,78,159,95,56,94,84,105,83,91,62,163,82,58,91,203,135,130,108,141,1115,	0,36072,38429,41664,50338,54194,86106,118968,126341,127578,132173,132810,135046,149499,179708,180272,187206,187773,189217,189504,199179,199330,200392,202350,203558,207888,227714,232051,235054,237121,237902,
#Partially deleted in new
chr16	47461328	47463522	chr16:47461328-47463522	0	+	47461328	47461328	8553170	2	98,425,	0,1769,
#Partially deleted in new
chr16	47461330	47548164	chr16:47461330-47548164	0	+	47461330	47461330	8553170	2	96,732,	0,86102,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	47461335	47590838	chr16:47461335-47590838	0	+	47461335	47461335	8553170	11	91,90,139,100,108,81,116,64,96,198,534,	0,36063,38420,41655,50329,54185,86097,118959,126332,127569,128969,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	47461349	47511731	chr16:47461349-47511731	0	+	47463938	47511731	789624	7	77,112,112,90,139,100,67,	0,991,2532,36049,38406,41641,50315,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	47462111	47463969	chr16:47462111-47463969	0	+	47463938	47463969	789624	2	341,71,	0,1787,
#Partially deleted in new
chr16	47462666	47499831	chr16:47462666-47499831	0	+	47463938	47499831	789624	3	1327,90,76,	0,34732,37089,
#Partially deleted in new
chr16	47499755	47587758	chr16:47499755-47587758	0	+	47499755	47562416	789624	8	139,100,108,81,116,98,64,91,	0,3235,11909,15765,47677,62642,80539,87912,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	47505431	47505543	chr16:47505431-47505543	7	+	47505431	47505431	16724991	1	112,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	47529189	47529916	chr16:47529189-47529916	3	+	47529189	47529189	8553170	2	52,441,	0,286,
#Deleted in new
chr16	47561306	47562480	chr16:47561306-47562480	7	-	47561306	47561306	16724991	1	1174,	0,
#Partially deleted in new
chr16	47565089	47566884	chr16:47565089-47566884	7	-	47565089	47565089	16724991	1	1795,	0,
#Partially deleted in new
chr16	47594149	47598036	chr16:47594149-47598036	0	+	47594149	47594149	8553170	3	65,159,233,	0,2223,3654,
#Partially deleted in new
chr16	47596427	47619429	chr16:47596427-47619429	0	+	47596427	47619159	789624	3	104,95,300,	0,14398,22702,
#Deleted in new
chr16	47598653	47598996	chr16:47598653-47598996	7	-	47598653	47598653	16724991	1	343,	0,
#Partially deleted in new
chr16	47650829	47664390	chr16:47650829-47664390	0	+	47650829	47650829	8553170	5	92,62,163,82,714,	0,9676,9827,10889,12847,
#Partially deleted in new
chr16	47660702	47676409	chr16:47660702-47676409	0	+	47660702	47675667	789624	6	117,82,58,91,203,824,	0,1016,2974,5239,8512,14883,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	47664789	47700348	chr16:47664789-47700348	0	+	47664789	47664789	8553170	7	1243,203,135,130,108,141,1120,	0,4425,24251,28588,31591,33658,34439,
#Deleted in new
chr16	47696471	47699694	chr16:47696471-47699694	0	+	47696471	47699233	789624	3	17,141,539,	0,1976,2684,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	47724567	47863599	chr16:47724567-47863599	0	+	47724567	47724567	8553170	3	279,114,154,	0,90062,138878,
#Deleted in new
chr16	47760779	47760921	chr16:47760779-47760921	7	-	47760779	47760779	16724991	1	142,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	47849313	47887130	chr16:47849313-47887130	3	-	47849313	47849313	789624	2	635,690,	0,37127,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	47858578	47908431	chr16:47858578-47908431	3	+	47858578	47858578	789624	6	1351,154,237,88,153,643,	0,4867,20620,21485,48560,49210,
#Partially deleted in new
chr16	47965671	47971687	chr16:47965671-47971687	3	+	47965671	47965671	8553170	3	149,83,325,	0,1214,5691,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	48059670	48059995	chr16:48059670-48059995	7	-	48059670	48059670	16724991	1	325,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	48081005	48091207	chr16:48081005-48091207	0	-	48087921	48091207	8553170	8	774,123,209,165,114,1345,190,88,	0,1452,2587,2903,4587,5735,7539,10114,
#Partially deleted in new
chr16	48082972	48146770	chr16:48082972-48146770	3	-	48083714	48146424	789624	29	829,165,114,79,160,190,90,157,138,227,198,104,90,72,85,135,204,73,125,72,279,108,149,148,174,230,152,156,465,	0,936,2620,3768,4953,5572,8147,13773,17899,21169,22166,24349,25467,28463,28605,28803,32442,34288,38743,41240,45486,47815,50714,55255,56190,57714,58229,60937,63333,
#Partially deleted in new
chr16	48083346	48156018	chr16:48083346-48156018	0	-	48115428	48146424	789624	29	455,165,114,160,190,90,187,138,227,198,104,90,72,76,135,204,125,72,279,108,149,148,174,234,148,156,169,269,178,	0,562,2246,4579,5198,7773,13399,17525,20795,21792,23975,25093,28089,28240,28429,32068,38369,40866,45112,47441,50340,54881,55816,57340,57859,60563,62959,70269,72494,
#Partially deleted in new
chr16	48083346	48146650	chr16:48083346-48146650	0	-	48096931	48146424	789624	26	455,165,114,160,190,90,187,138,227,198,104,90,85,135,204,73,125,72,279,108,149,148,234,148,156,345,	0,562,2246,4579,5198,7773,13399,17525,20795,21792,23975,25093,28231,28429,32068,33914,38369,40866,45112,47441,50340,54881,57340,57859,60563,62959,
#Partially deleted in new
chr16	48083695	48146430	chr16:48083695-48146430	0	-	48096931	48146424	789624	28	106,165,114,160,190,90,187,138,227,198,104,90,72,76,135,204,73,125,72,279,108,149,148,174,234,148,156,125,	0,213,1897,4230,4849,7424,13050,17176,20446,21443,23626,24744,27740,27891,28080,31719,33565,38020,40517,44763,47092,49991,54532,55467,56991,57510,60214,62610,
#Partially deleted in new
chr16	48083695	48146430	chr16:48083695-48146430	0	-	48096926	48146424	789624	28	106,165,114,79,146,190,90,187,138,198,104,90,72,76,135,204,73,125,72,279,108,149,148,174,234,148,156,125,	0,213,1897,3045,4244,4849,7424,13050,17176,21443,23626,24744,27740,27891,28080,31719,33565,38020,40517,44763,47092,49991,54532,55467,56991,57510,60214,62610,
#Partially deleted in new
chr16	48083695	48146430	chr16:48083695-48146430	0	-	48096931	48146424	789624	28	106,165,114,146,190,90,187,138,227,198,104,90,72,76,135,204,73,125,72,279,108,149,148,174,234,148,156,125,	0,213,1897,4244,4849,7424,13050,17176,20446,21443,23626,24744,27740,27891,28080,31719,33565,38020,40517,44763,47092,49991,54532,55467,56991,57510,60214,62610,
#Partially deleted in new
chr16	48084054	48086640	chr16:48084054-48086640	0	-	48084054	48084054	8553170	3	19,114,449,	0,1538,2137,
#Partially deleted in new
chr16	48087165	48091238	chr16:48087165-48091238	0	-	48087165	48087165	8553170	3	920,190,119,	0,1379,3954,
#Partially deleted in new
chr16	48111447	48115433	chr16:48111447-48115433	0	-	48111447	48111447	8553170	3	215,135,19,	0,328,3967,
#Partially deleted in new
chr16	48121239	48155993	chr16:48121239-48155993	0	-	48121239	48121239	8553170	12	601,72,279,108,149,148,174,234,148,156,169,153,	0,2973,7219,9548,12447,16988,17923,19447,19966,22670,25066,34601,
#Partially deleted in new
chr16	48133768	48155993	chr16:48133768-48155993	0	-	48138323	48146424	789624	8	67,148,149,234,148,156,169,153,	0,4459,5419,6918,7437,10141,12537,22072,
#Partially deleted in new
chr16	48141310	48155993	chr16:48141310-48155993	0	-	48141310	48146424	789624	4	43,156,169,176,	0,2599,4995,14507,
#Partially deleted in new
chr16	48164951	48167238	chr16:48164951-48167238	3	-	48164951	48164951	8553170	3	206,134,86,	0,741,2201,
#Partially deleted in new
chr16	48166909	48235177	chr16:48166909-48235177	1	-	48167273	48231921	789624	29	457,165,79,160,190,90,187,138,227,198,104,90,97,135,204,73,125,72,252,108,149,148,174,234,148,159,137,117,46,	0,586,3979,8348,10014,11687,17530,20043,20291,25610,26969,29322,31061,31231,33366,36318,38503,41515,44038,46533,47971,48287,49204,55688,57372,60896,63527,64913,68222,
#Partially deleted in new
chr16	48166909	48247394	chr16:48166909-48247394	3	-	48167273	48231921	789624	30	457,165,114,79,160,190,90,187,138,227,198,104,90,97,135,204,73,125,72,252,108,149,148,174,234,148,159,137,117,81,	0,586,3195,3979,8348,10014,11687,17530,20043,20291,25610,26969,29322,31061,31231,33366,36318,38503,41515,44038,46533,47971,48287,49204,55688,57372,60896,63527,64913,80404,
#Partially deleted in new
chr16	48166909	48187390	chr16:48166909-48187390	0	-	48166909	48166909	8553170	11	457,165,114,79,160,43,190,90,187,138,190,	0,586,3195,3979,8348,9091,10014,11687,17530,20043,20291,
#Partially deleted in new
chr16	48166910	48232271	chr16:48166910-48232271	1	-	48167273	48231921	789624	29	456,165,114,79,160,190,90,187,138,227,198,104,90,97,135,204,73,125,72,252,108,149,148,174,234,148,159,137,449,	0,585,3194,3978,8347,10013,11686,17529,20042,20290,25609,26968,29321,31060,31230,33365,36317,38502,41514,44037,46532,47970,48286,49203,55687,57371,60895,63526,64912,
#Partially deleted in new
chr16	48166910	48235177	chr16:48166910-48235177	1	-	48167273	48231921	789624	30	456,165,114,79,160,190,90,187,138,227,198,104,90,97,135,204,73,125,72,252,108,149,148,174,234,148,159,137,117,46,	0,585,3194,3978,8347,10013,11686,17529,20042,20290,25609,26968,29321,31060,31230,33365,36317,38502,41514,44037,46532,47970,48286,49203,55687,57371,60895,63526,64912,68221,
#Partially deleted in new
chr16	48187389	48198250	chr16:48187389-48198250	0	-	48187389	48187389	8553170	6	38,117,104,90,97,110,	0,5130,6489,8842,10581,10751,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	48209352	48244588	chr16:48209352-48244588	0	-	48209352	48209352	8553170	11	1847,108,149,148,174,234,148,159,137,117,380,	0,4090,5528,5844,6761,13245,14929,18453,21084,22470,34856,
#Partially deleted in new
chr16	48215231	48223707	chr16:48215231-48223707	0	-	48215231	48215231	8553170	4	113,174,234,150,	0,882,7366,8326,
#Partially deleted in new
chr16	48224347	48247568	chr16:48224347-48247568	0	-	48224347	48231921	789624	5	82,159,137,117,87,	0,3458,6089,7475,23134,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	48244295	48357349	chr16:48244295-48357349	3	+	48244388	48351802	789624	15	326,235,132,123,164,95,259,142,151,127,134,143,208,191,5769,	0,7835,12314,14322,17128,18482,25720,33042,51719,55366,58876,89920,103211,103804,107285,
#Partially deleted in new
chr16	48244332	48351899	chr16:48244332-48351899	1	+	48244388	48351802	789624	14	289,235,123,164,95,259,142,151,127,134,143,208,191,319,	0,7798,14285,17091,18445,25683,33005,51682,55329,58839,89883,103174,103767,107248,
#Duplicated in new
chr16	48244354	48347616	chr16:48244354-48347616	0	+	48244388	48336404	789624	13	267,235,123,164,95,259,142,151,127,134,143,106,110,	0,7776,14263,17069,18423,25661,32983,51660,55307,58817,89861,92038,103152,
#Partially deleted in new
chr16	48244387	48351851	chr16:48244387-48351851	0	+	48244388	48270031	789624	14	234,235,132,123,164,259,142,151,127,134,143,208,191,271,	0,7743,12222,14230,17036,25628,32950,51627,55274,58784,89828,103119,103712,107193,
#Partially deleted in new
chr16	48262775	48303283	chr16:48262775-48303283	0	+	48262775	48296096	789624	6	97,259,142,81,127,112,	0,7240,14562,33309,36886,40396,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	48334311	48363122	chr16:48334311-48363122	0	+	48334311	48361863	789624	5	47,208,191,105,1418,	0,13195,13788,17269,27393,
#Deleted in new
chr16	48334470	48334854	chr16:48334470-48334854	7	-	48334470	48334470	16724991	1	384,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	48343754	48346058	chr16:48343754-48346058	3	-	48343754	48343754	8553170	1	2304,	0,
#Partially deleted in new
chr16	48348095	48361836	chr16:48348095-48361836	0	+	48348095	48348095	8553170	4	195,218,46,360,	0,3485,8569,13381,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	48355685	48362737	chr16:48355685-48362737	0	+	48355685	48355685	5263520	2	1025,1261,	0,5791,
#Partially deleted in new
chr16	48356363	48361792	chr16:48356363-48361792	0	-	48356363	48356363	8553170	2	147,330,	0,5099,
#Partially deleted in new
chr16	48356363	48448402	chr16:48356363-48448402	0	-	48361579	48362428	0	7	147,943,215,136,81,98,1063,	0,5124,30690,36393,37516,47206,90976,
#Partially deleted in new
chr16	48356448	48362042	chr16:48356448-48362042	0	+	48356448	48356448	8553170	3	262,283,189,	0,5028,5405,
#Partially deleted in new
chr16	48360530	48365901	chr16:48360530-48365901	1	-	48361579	48365477	0	2	1900,515,	0,4856,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	48360530	48363882	chr16:48360530-48363882	1	-	48361579	48362428	0	1	3352,	0,
#Partially deleted in new
chr16	48360530	48385450	chr16:48360530-48385450	3	-	48361579	48362428	0	2	1900,247,	0,24673,
#Partially deleted in new
chr16	48362132	48393955	chr16:48362132-48393955	0	-	48362132	48362428	789624	3	298,215,76,	0,24921,31747,
#Deleted in new
chr16	48364849	48365724	chr16:48364849-48365724	0	-	48364849	48364849	8553170	2	367,338,	0,537,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	48387197	48417319	chr16:48387197-48417319	0	-	48387197	48387197	8553170	3	71,98,504,	0,16372,29618,
#Deleted in new
chr16	48447903	48448398	chr16:48447903-48448398	3	-	48447903	48447903	8553170	2	178,130,	0,365,
#Partially deleted in new
chr16	48470952	48471133	chr16:48470952-48471133	7	-	48470952	48470952	16724991	1	181,	0,
#Partially deleted in new
chr16	48496989	48498601	chr16:48496989-48498601	7	+	48496989	48496989	16724991	1	1612,	0,
#Partially deleted in new
chr16	48538725	48610209	chr16:48538725-48610209	3	-	48542903	48609972	789624	7	4536,108,108,97,131,1691,435,	0,7421,9281,12660,14813,22028,71049,
#Partially deleted in new
chr16	48542879	48551444	chr16:48542879-48551444	0	-	48542879	48542879	8553170	3	382,108,59,	0,5127,8506,
#Partially deleted in new
chr16	48543163	48546584	chr16:48543163-48546584	0	-	48543163	48543163	8553170	2	98,438,	0,2983,
#Partially deleted in new
chr16	48546096	48620148	chr16:48546096-48620148	0	-	48546096	48546096	8553170	6	158,108,97,131,1691,300,	0,1910,5289,7442,14657,73752,
#Partially deleted in new
chr16	48546181	48553653	chr16:48546181-48553653	0	-	48546181	48546181	8553170	3	73,108,115,	0,1825,7357,
#Partially deleted in new
chr16	48561957	48603712	chr16:48561957-48603712	0	-	48561957	48562384	789624	2	487,53,	0,41702,
#Deleted in new
chr16	48577523	48578369	chr16:48577523-48578369	7	-	48577523	48577523	16724991	1	846,	0,
#Deleted in new
chr16	48600175	48600644	chr16:48600175-48600644	7	+	48600175	48600175	16724991	1	469,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	48620318	48622033	chr16:48620318-48622033	3	+	48620318	48620318	8553170	2	63,243,	0,1472,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	48623435	48744921	chr16:48623435-48744921	3	+	48623435	48623435	8553170	4	168,120,83,455,	0,117847,120811,121031,
#Partially deleted in new
chr16	48623446	48673478	chr16:48623446-48673478	1	+	48623446	48623446	8553170	3	157,134,563,	0,48453,49469,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	48623461	48676752	chr16:48623461-48676752	0	+	48623461	48623461	8553170	3	142,173,359,	0,48399,52932,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	48637142	48638719	chr16:48637142-48638719	3	+	48637142	48637142	8553170	2	142,397,	0,1180,
#Deleted in new
chr16	48640472	48641052	chr16:48640472-48641052	3	+	48640472	48640472	8553170	1	580,	0,
#Deleted in new
chr16	48718082	48719143	chr16:48718082-48719143	7	+	48718082	48718082	16724991	1	1061,	0,
#Deleted in new
chr16	48731703	48731801	chr16:48731703-48731801	3	-	48731703	48731703	8553170	1	98,	0,
#Deleted in new
chr16	48849918	48850015	chr16:48849918-48850015	7	-	48849918	48849918	16724991	1	97,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	49066566	49066729	chr16:49066566-49066729	7	-	49066566	49066566	16724991	1	163,	0,
#Partially deleted in new
chr16	49159507	49162023	chr16:49159507-49162023	3	+	49159507	49159507	8553170	2	188,230,	0,2286,
#Deleted in new
chr16	49170551	49171786	chr16:49170551-49171786	3	+	49170551	49170551	8553170	1	1235,	0,
#Deleted in new
chr16	49277916	49281831	chr16:49277916-49281831	3	-	49279403	49281465	0	3	1685,120,630,	0,3006,3285,
#Deleted in new
chr16	49279289	49281482	chr16:49279289-49281482	0	-	49281042	49281465	789624	2	312,560,	0,1633,
#Deleted in new
chr16	49279311	49281562	chr16:49279311-49281562	1	-	49279403	49281465	0	4	290,120,272,36,	0,1611,1890,2215,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	49282036	49296736	chr16:49282036-49296736	1	+	49282036	49282036	8553170	6	196,103,109,160,118,6008,	0,3484,5330,5793,7501,8692,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	49282036	49350504	chr16:49282036-49350504	0	+	49282036	49282036	8553170	5	196,190,121,151,2465,	0,48430,60051,61310,66003,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	49282036	49350504	chr16:49282036-49350504	1	+	49282036	49282036	8553170	9	196,141,109,212,190,121,151,182,2024,	0,3446,5330,7407,48430,60051,61310,62150,66444,
#Partially deleted in new
chr16	49282036	49290528	chr16:49282036-49290528	2	+	49282036	49282036	8553170	5	196,109,160,252,633,	0,5330,5793,7367,7859,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	49282036	49350504	chr16:49282036-49350504	0	+	49282036	49282036	8553170	7	196,141,109,118,190,121,2465,	0,3446,5330,7501,48430,60051,66003,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	49282097	49338438	chr16:49282097-49338438	0	+	49282097	49282097	8553170	4	135,190,217,1207,	0,48369,54563,55134,
#Deleted in new
chr16	49287429	49290227	chr16:49287429-49290227	0	+	49287429	49287429	8553170	3	46,118,490,	0,2108,2308,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	49297142	49299762	chr16:49297142-49299762	3	+	49297142	49297142	8553170	1	2620,	0,
#Partially deleted in new
chr16	49373822	49399431	chr16:49373822-49399431	3	+	49373939	49399278	789624	5	267,120,124,256,301,	0,3908,4647,22600,25308,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	49442909	49454078	chr16:49442909-49454078	3	-	49442909	49442909	8553170	4	457,30,113,74,	0,1864,10352,11095,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	49454228	49457269	chr16:49454228-49457269	3	+	49454228	49454228	8553170	2	75,496,	0,2545,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	49466105	49469875	chr16:49466105-49469875	3	+	49466105	49466105	8553170	2	2376,1297,	0,2473,
#Partially deleted in new
chr16	49487523	49827010	chr16:49487523-49827010	1	-	49491274	49822685	0	9	3781,116,132,85,3215,201,60,69,248,	0,36100,37839,138646,148136,243247,301963,335146,339239,
#Partially deleted in new
chr16	49490603	49856135	chr16:49490603-49856135	1	-	49491274	49730867	0	8	701,116,132,85,3215,201,60,401,	0,33020,34759,135566,145056,240167,298883,365131,
#Partially deleted in new
chr16	49490604	49822738	chr16:49490604-49822738	1	-	49491274	49822685	0	8	700,116,132,85,3215,201,60,69,	0,33019,34758,135565,145055,240166,298882,332065,
#Partially deleted in new
chr16	49490604	49780609	chr16:49490604-49780609	1	-	49491274	49730867	0	7	700,116,132,85,3215,201,65,	0,33019,34758,135565,145055,240166,289940,
#Partially deleted in new
chr16	49490786	49664225	chr16:49490786-49664225	1	-	49491274	49638800	789624	6	518,116,132,85,3215,135,	0,32837,34576,135383,144873,173304,
#Partially deleted in new
chr16	49490950	49640852	chr16:49490950-49640852	1	-	49491274	49638800	789624	6	354,116,132,85,3215,115,	0,32673,34412,135219,144709,149787,
#Partially deleted in new
chr16	49491274	49857919	chr16:49491274-49857919	3	-	49491274	49730867	0	8	30,116,132,85,3215,201,60,179,	0,32349,34088,134895,144385,239496,298212,366466,
#Deleted in new
chr16	49517761	49518601	chr16:49517761-49518601	7	-	49517761	49517761	16724991	1	840,	0,
#Deleted in new
chr16	49708005	49708243	chr16:49708005-49708243	7	+	49708005	49708005	16724991	1	238,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	49711272	49711914	chr16:49711272-49711914	3	+	49711272	49711272	8553170	1	642,	0,
#Partially deleted in new
chr16	49730575	49789546	chr16:49730575-49789546	0	-	49730723	49789546	789624	2	396,60,	0,58911,
#Partially deleted in new
chr16	49764453	49764688	chr16:49764453-49764688	7	+	49764453	49764453	16724991	1	235,	0,
#Deleted in new
chr16	49847017	49847632	chr16:49847017-49847632	3	-	49847017	49847017	8553170	1	615,	0,
#Deleted in new
chr16	49900018	49900524	chr16:49900018-49900524	3	+	49900018	49900018	8553170	1	506,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	49920729	49924154	chr16:49920729-49924154	3	-	49920729	49920729	8553170	2	1584,501,	0,2924,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	49935027	49935352	chr16:49935027-49935352	7	+	49935027	49935027	16724991	1	325,	0,
#Partially deleted in new
chr16	49954984	49968730	chr16:49954984-49968730	7	-	49954984	49954984	16724991	6	171,158,260,199,127,64,	0,3106,4575,8316,13052,13682,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	50024409	50037088	chr16:50024409-50037088	1	+	50025315	50035458	789624	7	931,51,72,74,110,55,1672,	0,1241,1986,5315,8987,9692,11007,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	50025205	50037087	chr16:50025205-50037087	3	+	50025315	50035458	789624	6	135,72,74,110,55,1671,	0,1190,4519,8191,8896,10211,
#Partially deleted in new
chr16	50025233	50035600	chr16:50025233-50035600	0	+	50025315	50033443	789624	6	107,51,72,110,55,184,	0,417,1162,8163,8868,10183,
#Deleted in new
chr16	50025240	50025784	chr16:50025240-50025784	0	+	50025240	50025240	8553170	2	105,350,	0,194,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	50025254	50037085	chr16:50025254-50037085	0	+	50025315	50033443	789624	5	86,72,110,55,1669,	0,1141,8142,8847,10162,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	50025261	50026859	chr16:50025261-50026859	0	+	50025261	50025261	8553170	4	79,51,72,161,	0,389,1134,1437,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	50025263	50034668	chr16:50025263-50034668	0	+	50025315	50033443	789624	4	77,72,110,567,	0,1132,8133,8838,
#Partially deleted in new
chr16	50025270	50035696	chr16:50025270-50035696	1	+	50025315	50034152	789624	6	70,72,74,110,50,280,	0,1125,4454,8126,8836,10146,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	50025279	50037080	chr16:50025279-50037080	0	+	50025315	50035458	789624	7	61,72,74,110,55,759,613,	0,1116,4445,8117,8822,10137,11188,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	50025519	50036630	chr16:50025519-50036630	1	+	50026466	50035458	789624	6	182,72,74,110,55,1214,	0,876,4205,7877,8582,9897,
#Partially deleted in new
chr16	50026159	50034156	chr16:50026159-50034156	0	+	50026466	50034156	789624	4	308,74,110,55,	0,3565,7237,7942,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	50046428	50066224	chr16:50046428-50066224	3	-	50046428	50046428	8553170	3	209,117,172,	0,18262,19624,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	50046495	50047798	chr16:50046495-50047798	7	+	50046495	50046495	16724991	2	400,534,	0,769,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	50054142	50054430	chr16:50054142-50054430	3	+	50054142	50054142	8553170	1	288,	0,
#Deleted in new
chr16	50058149	50059231	chr16:50058149-50059231	7	-	50058149	50058149	16724991	1	1082,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	50065940	50106387	chr16:50065940-50106387	3	+	50066131	50105061	789624	15	329,173,88,113,110,141,278,91,158,83,137,89,144,177,1449,	0,426,2839,4237,6664,9630,12800,17996,18193,18628,20274,28764,34289,36318,38998,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	50065995	50070238	chr16:50065995-50070238	0	+	50065995	50065995	8553170	4	274,88,45,61,	0,2784,3249,4182,
#Deleted in new
chr16	50066005	50066848	chr16:50066005-50066848	0	+	50066005	50066005	8553170	2	264,482,	0,361,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	50072861	50074986	chr16:50072861-50074986	3	+	50072861	50072861	8553170	1	2125,	0,
#Partially deleted in new
chr16	50078943	50084620	chr16:50078943-50084620	0	+	50078943	50078943	8553170	4	75,91,184,52,	0,4993,5164,5625,
#Partially deleted in new
chr16	50080031	50094805	chr16:50080031-50094805	0	+	50080031	50080031	8553170	6	231,91,158,83,137,101,	0,3905,4102,4537,6183,14673,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	50098263	50098358	chr16:50098263-50098358	3	+	50098263	50098263	8553170	1	95,	0,
#Partially deleted in new
chr16	50100338	50121943	chr16:50100338-50121943	3	-	50100338	50100338	8553170	3	432,109,125,	0,6205,21480,
#Deleted in new
chr16	50151279	50151577	chr16:50151279-50151577	7	-	50151279	50151279	16724991	1	298,	0,
#Deleted in new
chr16	50151641	50151731	chr16:50151641-50151731	3	-	50151641	50151641	8553170	1	90,	0,
#Partially deleted in new
chr16	50152917	50231831	chr16:50152917-50231831	3	+	50152952	50229328	789624	13	115,513,124,47,121,108,129,214,127,104,188,165,2680,	0,829,58405,61303,63157,64638,69388,70256,71739,71973,72180,74921,76234,
#Partially deleted in new
chr16	50153793	50230403	chr16:50153793-50230403	1	+	50153867	50229328	789624	11	466,124,47,121,108,214,127,104,188,165,1252,	0,57529,60427,62281,63762,69380,70863,71097,71304,74045,75358,
#Partially deleted in new
chr16	50154160	50235306	chr16:50154160-50235306	0	+	50154160	50154160	8553170	13	99,124,47,121,108,129,227,127,104,188,165,46,381,	0,57162,60060,61914,63395,68145,69013,70496,70730,70937,73678,74991,80765,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	50214225	50235310	chr16:50214225-50235310	0	+	50214225	50227839	789624	10	42,121,108,129,214,127,121,47,165,6159,	0,1849,3330,8080,8948,10431,10665,11013,13613,14926,
#Partially deleted in new
chr16	50246136	50290528	chr16:50246136-50290528	0	+	50288179	50290528	789624	3	67,439,72,	0,41775,44320,
#Partially deleted in new
chr16	50246147	50299011	chr16:50246147-50299011	0	+	50246147	50246147	8553170	5	56,150,149,112,108,	0,46528,47206,48492,52756,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr16	50266515	50318135	chr16:50266515-50318135	3	+	50288179	50315505	789624	26	72,439,204,162,150,149,112,128,159,133,192,35,84,73,98,85,126,99,194,94,156,147,105,115,125,2777,	0,21396,23941,25220,26160,26838,28124,32388,34199,34566,37844,38409,38987,39261,40534,41811,42151,43032,44171,45177,45520,46374,47442,47776,48498,48843,
#Partially deleted in new
chr16	50266540	50288104	chr16:50266540-50288104	0	+	50266540	50266540	8553170	2	140,193,	0,21371,
#Partially deleted in new
chr16	50266550	50310523	chr16:50266550-50310523	1	+	50288179	50310498	789624	19	37,439,204,162,150,149,112,128,159,133,192,35,84,73,98,85,126,99,70,	0,21361,23906,25185,26125,26803,28089,32353,34164,34531,37809,38374,38952,39226,40499,41776,42116,42997,43903,
#Partially deleted in new
chr16	50266563	50287934	chr16:50266563-50287934	0	+	50266563	50266563	8553170	2	117,53,	0,21318,
#Partially deleted in new
chr16	50274130	50298981	chr16:50274130-50298981	0	+	50274130	50274130	8553170	5	68,150,149,112,78,	0,18545,19223,20509,24773,
#Partially deleted in new
chr16	50279526	50288230	chr16:50279526-50288230	0	+	50288179	50288230	789624	2	178,319,	0,8385,
#Partially deleted in new
chr16	50287910	50310515	chr16:50287910-50310515	1	+	50288179	50305800	789624	15	440,204,162,150,149,112,128,159,43,73,98,85,126,99,62,	0,2546,3825,4765,5443,6729,10993,12804,13171,17866,19139,20416,20756,21637,22543,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr16	50287911	50318132	chr16:50287911-50318132	1	+	50288179	50315505	789624	25	439,204,162,150,149,112,128,159,133,192,35,84,73,98,85,126,99,194,94,156,147,105,115,125,2774,	0,2545,3824,4764,5442,6728,10992,12803,13170,16448,17013,17591,17865,19138,20415,20755,21636,22775,23781,24124,24978,26046,26380,27102,27447,
#Partially deleted in new
chr16	50288076	50310529	chr16:50288076-50310529	0	+	50288179	50305535	789624	18	274,204,162,150,149,112,128,159,133,157,35,84,73,98,85,126,99,76,	0,2380,3659,4599,5277,6563,10827,12638,13005,16283,16848,17426,17700,18973,20250,20590,21471,22377,
#Deleted in new
chr16	50292615	50292675	chr16:50292615-50292675	3	+	50292615	50292615	5263520	1	60,	0,
#Deleted in new
chr16	50300819	50301964	chr16:50300819-50301964	0	+	50300819	50300819	8553170	3	54,133,297,	0,262,848,
#Partially deleted in new
chr16	50304393	50309198	chr16:50304393-50309198	0	+	50304393	50304393	8553170	6	158,35,84,73,98,872,	0,531,1109,1383,2656,3933,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	50313103	50315738	chr16:50313103-50315738	0	+	50313103	50313103	8553170	4	959,115,125,380,	0,1188,1910,2255,
#Partially deleted in new
chr16	50313486	50319929	chr16:50313486-50319929	0	-	50319210	50319929	789624	3	2472,65,43,	0,5715,6400,
#Partially deleted in new
chr16	50315946	50320377	chr16:50315946-50320377	0	-	50319210	50320377	789624	4	77,65,144,130,	0,3255,3940,4301,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr16	50315956	50368934	chr16:50315956-50368934	3	-	50319210	50368774	0	17	3310,144,144,112,57,112,136,108,76,124,185,111,145,58,130,209,209,	0,3930,4291,4706,6025,7630,9791,10327,12712,17617,18754,24019,34066,38468,38836,52133,52769,
#Partially deleted in new
chr16	50319029	50368779	chr16:50319029-50368779	1	-	50319210	50368774	0	17	237,144,144,115,57,112,136,108,76,124,185,111,145,58,130,209,54,	0,857,1218,1633,2952,4557,6718,7254,9639,14544,15681,20946,30993,35395,35763,49060,49696,
#Partially deleted in new
chr16	50334710	50361833	chr16:50334710-50361833	0	-	50334710	50334710	8553170	6	185,111,145,58,130,42,	0,5265,15312,19714,20082,27081,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	50349022	50368920	chr16:50349022-50368920	0	-	50349022	50349022	8553170	6	601,145,58,130,209,195,	0,1000,5402,5770,19067,19703,
#Partially deleted in new
chr16	50350016	50368920	chr16:50350016-50368920	0	-	50350016	50350016	8553170	5	151,55,130,209,195,	0,4408,4776,18073,18709,
#Deleted in new
chr16	50368579	50371480	chr16:50368579-50371480	3	+	50368579	50368579	8553170	2	156,322,	0,2579,
#Partially deleted in new
chr16	50390915	50395133	chr16:50390915-50395133	3	-	50390915	50390915	789624	2	226,199,	0,4019,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	50407665	50522638	chr16:50407665-50522638	3	+	50407665	50407665	8553170	5	279,70,70,102,162,	0,13551,85940,87784,114811,
#Deleted in new
chr16	50407700	50408513	chr16:50407700-50408513	1	+	50407700	50407700	8553170	2	244,273,	0,540,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	50505944	50546347	chr16:50505944-50546347	1	+	50505944	50505944	8553170	15	307,109,52,135,179,96,116,103,773,292,50,93,276,122,258,	0,13125,16532,18888,19940,20501,24269,25534,26063,28590,30774,34169,36213,36761,40145,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	50548329	50649249	chr16:50548329-50649249	3	+	50548553	50633781	789624	10	249,33,134,67,107,96,148,85,128,16058,	0,387,1092,59964,73272,77155,81856,82496,83951,84862,
#Partially deleted in new
chr16	50548395	50616108	chr16:50548395-50616108	0	+	50548395	50548395	8553170	5	183,33,134,67,60,	0,321,1026,59898,67653,
#Deleted in new
chr16	50551823	50553940	chr16:50551823-50553940	3	-	50551823	50551823	8553170	2	706,440,	0,1677,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	50555354	50558719	chr16:50555354-50558719	3	+	50555354	50555354	8553170	1	3365,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	50606075	50613684	chr16:50606075-50613684	3	-	50606075	50606075	8553170	2	2375,94,	0,7515,
#Partially deleted in new
chr16	50625224	50633222	chr16:50625224-50633222	0	+	50625224	50625224	8553170	5	356,148,85,128,31,	0,4961,5601,7056,7967,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	50666210	50671578	chr16:50666210-50671578	3	+	50666210	50666210	8553170	2	4783,431,	0,4937,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	50666299	50681353	chr16:50666299-50681353	1	-	50669040	50677526	789624	4	2849,152,139,164,	0,9470,11097,14890,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	50666299	50681312	chr16:50666299-50681312	1	-	50668014	50677526	789624	4	1742,152,139,123,	0,9470,11097,14890,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	50666557	50681302	chr16:50666557-50681302	0	-	50669040	50677526	789624	5	359,1240,152,139,113,	0,1351,9212,10839,14632,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	50668854	50671639	chr16:50668854-50671639	1	+	50668854	50668854	789624	3	306,311,492,	0,1828,2293,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	50671624	50681352	chr16:50671624-50681352	3	-	50673405	50677526	789624	4	2450,152,139,163,	0,4145,5772,9565,
#Partially deleted in new
chr16	50673333	50681206	chr16:50673333-50681206	1	-	50673405	50677526	789624	5	159,90,152,139,17,	0,651,2436,4063,7856,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	50693587	50734041	chr16:50693587-50734041	0	+	50699495	50715609	789624	13	75,467,106,1816,147,84,84,84,84,84,84,84,2295,	0,5900,14267,16970,22021,22999,23303,26337,29034,29713,31901,36230,38159,
#Partially deleted in new
chr16	50693587	50731819	chr16:50693587-50731819	1	+	50699495	50731819	789624	12	75,467,106,1816,84,84,84,84,84,84,84,73,	0,5900,14267,16970,22999,23303,26337,29034,29713,31901,36230,38159,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	50693602	50710951	chr16:50693602-50710951	0	+	50693602	50693602	8553170	5	60,467,106,73,394,	0,5885,14252,16341,16955,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	50693611	50734041	chr16:50693611-50734041	0	+	50699495	50729818	789624	6	51,467,106,1816,84,2295,	0,5876,14243,16946,36206,38135,
#Partially deleted in new
chr16	50693625	50699933	chr16:50693625-50699933	0	+	50699495	50699933	789624	3	37,141,446,	0,2714,5862,
#Partially deleted in new
chr16	50697138	50733077	chr16:50697138-50733077	3	+	50697243	50731819	789624	12	178,467,106,1816,84,84,84,84,84,84,84,1331,	0,2349,10716,13419,19448,19752,22786,25483,26162,28350,32679,34608,
#Partially deleted in new
chr16	50697139	50710791	chr16:50697139-50710791	0	+	50697243	50697351	789624	4	900,467,106,234,	0,2348,10715,13418,
#Partially deleted in new
chr16	50697139	50710791	chr16:50697139-50710791	0	+	50697139	50697139	8553170	3	177,467,234,	0,2348,13418,
#Partially deleted in new
chr16	50712193	50723374	chr16:50712193-50723374	0	+	50712193	50712374	789624	3	208,84,74,	0,10428,11107,
#Partially deleted in new
chr16	50712193	50723374	chr16:50712193-50723374	0	+	50712193	50722622	789624	3	180,84,74,	0,10428,11107,
#Partially deleted in new
chr16	50712193	50723374	chr16:50712193-50723374	0	+	50712193	50712374	789624	4	208,84,84,74,	0,7731,10428,11107,
#Partially deleted in new
chr16	50712193	50723374	chr16:50712193-50723374	0	+	50712193	50723374	789624	5	180,84,84,84,74,	0,4393,7731,10428,11107,
#Partially deleted in new
chr16	50712193	50723374	chr16:50712193-50723374	0	+	50712193	50712374	789624	3	444,84,74,	0,10428,11107,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	50712843	50713589	chr16:50712843-50713589	3	+	50712843	50712843	8553170	1	746,	0,
#Partially deleted in new
chr16	50735712	50740716	chr16:50735712-50740716	1	-	50735712	50735712	8553170	2	1113,37,	0,4967,
#Partially deleted in new
chr16	50742049	50796881	chr16:50742049-50796881	3	+	50749698	50796508	0	18	75,80,627,303,106,99,117,380,166,142,123,92,67,133,109,119,217,558,	0,712,7526,9554,12269,34129,35775,37615,39196,40275,42279,44805,45736,49508,50547,51496,52162,54274,
#Partially deleted in new
chr16	50742049	50750197	chr16:50742049-50750197	0	+	50749698	50750197	789624	3	75,80,622,	0,712,7526,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	50742069	50786781	chr16:50742069-50786781	0	+	50742069	50742069	8553170	12	55,80,137,627,303,106,99,117,380,166,142,2453,	0,692,2660,7506,9534,12249,34109,35755,37595,39176,40255,42259,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr16	50742073	50798617	chr16:50742073-50798617	1	+	50749698	50796508	0	20	51,80,137,627,303,106,9,99,117,380,166,142,123,92,67,133,109,119,217,2294,	0,688,2656,7502,9530,12245,33092,34105,35751,37591,39172,40251,42255,44781,45712,49484,50523,51472,52138,54250,
#Partially deleted in new
chr16	50742080	50796711	chr16:50742080-50796711	1	+	50749698	50796508	0	17	44,654,303,106,99,117,380,166,142,123,92,67,133,109,119,217,388,	0,7468,9523,12238,34098,35744,37584,39165,40244,42248,44774,45705,49477,50516,51465,52131,54243,
#Partially deleted in new
chr16	50742085	50795724	chr16:50742085-50795724	1	+	50749698	50795603	789624	18	39,61,654,303,106,99,117,380,166,142,123,92,67,133,109,119,217,177,	0,676,7463,9518,12233,34093,35739,37579,39160,40239,42243,44769,45700,49472,50511,51460,52126,53462,
#Partially deleted in new
chr16	50742109	50754424	chr16:50742109-50754424	0	+	50749698	50754424	789624	5	15,80,654,303,106,	0,652,7439,9494,12209,
#Partially deleted in new
chr16	50742117	50749798	chr16:50742117-50749798	0	+	50749698	50749798	789624	4	99,80,137,223,	0,644,2612,7458,
#Partially deleted in new
chr16	50742119	50796882	chr16:50742119-50796882	1	+	50749698	50796508	0	18	97,80,627,303,106,99,117,380,166,142,123,92,67,133,109,119,217,559,	0,642,7456,9484,12199,34059,35705,37545,39126,40205,42209,44735,45666,49438,50477,51426,52092,54204,
#Deleted in new
chr16	50742304	50742377	chr16:50742304-50742377	3	+	50742304	50742304	5263520	1	73,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr16	50742759	50801935	chr16:50742759-50801935	1	+	50749698	50796508	0	18	82,627,303,106,9,99,117,380,166,142,123,92,67,133,109,119,217,5612,	0,6816,8844,11559,32406,33419,35065,36905,38486,39565,41569,44095,45026,48798,49837,50786,51452,53564,
#Partially deleted in new
chr16	50749548	50797334	chr16:50749548-50797334	1	+	50749698	50796508	789624	14	654,303,106,99,117,142,123,92,67,133,109,119,217,1011,	0,2055,4770,26630,28276,32776,34780,37306,38237,42009,43048,43997,44663,46775,
#Partially deleted in new
chr16	50749962	50787746	chr16:50749962-50787746	0	+	50749962	50749962	8553170	10	240,303,106,99,117,380,166,142,123,892,	0,1641,4356,26216,27862,29702,31283,32362,34366,36892,
#Deleted in new
chr16	50776200	50778294	chr16:50776200-50778294	0	+	50776200	50776200	8553170	2	77,470,	0,1624,
#Partially deleted in new
chr16	50783858	50803338	chr16:50783858-50803338	3	-	50783858	50783858	8553170	3	331,154,302,	0,18264,19178,
#Partially deleted in new
chr16	50783858	50798242	chr16:50783858-50798242	0	-	50783858	50783858	8553170	2	331,27,	0,14357,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	50793616	50794888	chr16:50793616-50794888	0	+	50793616	50794478	789624	2	48,677,	0,595,
#Partially deleted in new
chr16	50794293	50801933	chr16:50794293-50801933	0	+	50794293	50800842	789624	3	177,53,179,	0,6526,7461,
#Deleted in new
chr16	50800678	50801930	chr16:50800678-50801930	0	+	50800678	50800678	8553170	2	194,176,	0,1076,
#Partially deleted in new
chr16	50806667	50807629	chr16:50806667-50807629	3	+	50806667	50806667	789624	2	140,212,	0,750,
#Partially deleted in new
chr16	50840016	50901063	chr16:50840016-50901063	0	+	50840016	50840016	8553170	3	385,202,601,	0,53644,60446,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	50856613	50879278	chr16:50856613-50879278	3	-	50856613	50856613	8553170	2	695,286,	0,22379,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	50860195	50901061	chr16:50860195-50901061	3	+	50860195	50860195	8553170	5	175,98,260,202,599,	0,24016,24286,33465,40267,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	50869454	50869575	chr16:50869454-50869575	7	-	50869454	50869454	16724991	1	121,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	50880208	50884101	chr16:50880208-50884101	1	+	50880208	50880208	8553170	2	53,2195,	0,1698,
#Partially deleted in new
chr16	50884208	50901061	chr16:50884208-50901061	0	+	50884208	50884208	8553170	4	114,266,202,599,	0,273,9452,16254,
#Partially deleted in new
chr16	50884208	50900690	chr16:50884208-50900690	0	+	50884208	50884208	8553170	4	114,260,202,228,	0,273,9452,16254,
#Partially deleted in new
chr16	51017543	51035771	chr16:51017543-51035771	3	+	51017543	51017543	8553170	4	352,57,252,236,	0,4676,7264,17992,
#Partially deleted in new
chr16	51017757	51035777	chr16:51017757-51035777	0	+	51017757	51017757	789624	3	138,57,242,	0,4462,17778,
#Partially deleted in new
chr16	51035117	51038764	chr16:51035117-51038764	3	-	51035117	51035117	8553170	4	333,147,49,55,	0,1479,2953,3592,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	51054727	51056399	chr16:51054727-51056399	3	-	51054727	51054727	8553170	2	470,41,	0,1631,
#Deleted in new
chr16	51107570	51108021	chr16:51107570-51108021	7	+	51107570	51107570	16724991	1	451,	0,
#Deleted in new
chr16	51135974	51151275	chr16:51135974-51151275	3	-	51137111	51151241	789624	3	1578,3458,110,	0,2713,15191,
#Deleted in new
chr16	51135974	51150597	chr16:51135974-51150597	1	-	51137111	51141930	789624	3	1578,3458,217,	0,2713,14406,
#Deleted in new
chr16	51137063	51151241	chr16:51137063-51151241	1	-	51137523	51151241	789624	2	489,76,	0,14102,
#Deleted in new
chr16	51137331	51150597	chr16:51137331-51150597	0	-	51137331	51141930	789624	3	221,3458,217,	0,1356,13049,
#Deleted in new
chr16	51143203	51151367	chr16:51143203-51151367	0	-	51143203	51143203	8553170	2	205,202,	0,7962,
#Deleted in new
chr16	51149238	51149819	chr16:51149238-51149819	3	+	51149238	51149238	8553170	2	350,137,	0,444,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	51150769	51314879	chr16:51150769-51314879	1	+	51150769	51150769	8553170	4	294,56,79,1936,	0,38184,160800,162174,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	51152120	51273213	chr16:51152120-51273213	0	+	51152120	51152120	8553170	3	55,278,983,	0,94693,120110,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	51152124	51356666	chr16:51152124-51356666	3	+	51152124	51152124	8553170	7	51,79,111,91,119,120,134,	0,159445,160819,163116,163500,193294,204408,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	51176065	51178898	chr16:51176065-51178898	3	+	51176065	51176065	8553170	1	2833,	0,
#Deleted in new
chr16	51244053	51244123	chr16:51244053-51244123	7	+	51244053	51244053	16724991	1	70,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	51246854	51384336	chr16:51246854-51384336	1	+	51246854	51246854	8553170	6	237,121,228,148,102,569,	0,115058,115729,117251,136349,136913,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	51277851	51279112	chr16:51277851-51279112	7	+	51277851	51277851	16724991	1	1261,	0,
#Deleted in new
chr16	51354455	51356532	chr16:51354455-51356532	0	-	51354455	51354455	8553170	2	259,197,	0,1880,
#Partially deleted in new
chr16	51355482	51525157	chr16:51355482-51525157	3	-	51355482	51355482	8553170	3	1077,105,294,	0,139619,169381,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	51356248	51525147	chr16:51356248-51525147	1	-	51356248	51356248	8553170	5	311,785,127,105,284,	0,31719,48253,138853,168615,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	51364099	51442519	chr16:51364099-51442519	1	+	51364099	51364099	8553170	4	154,238,61,2531,	0,47716,73257,75889,
#Partially deleted in new
chr16	51553435	51646780	chr16:51553435-51646780	3	+	51645952	51646780	789624	2	122,1450,	0,91895,
#Deleted in new
chr16	51645755	51647132	chr16:51645755-51647132	0	+	51645755	51645755	8553170	1	1377,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	51671235	51671563	chr16:51671235-51671563	3	-	51671235	51671235	8553170	1	328,	0,
#Partially deleted in new
chr16	51762518	51772646	chr16:51762518-51772646	0	+	51762518	51762518	789624	3	57,109,271,	0,9045,9857,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	51771563	51773173	chr16:51771563-51773173	3	+	51771563	51771563	8553170	3	109,184,518,	0,812,1092,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	52005486	52078474	chr16:52005486-52078474	3	-	52005486	52005486	8553170	4	148,61,119,78,	0,52881,69406,72910,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	52005489	52027371	chr16:52005489-52027371	1	-	52005489	52005489	8553170	4	145,60,59,17,	0,20895,21499,21865,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	52005491	52007407	chr16:52005491-52007407	0	-	52005491	52005491	8553170	1	1916,	0,
#Deleted in new
chr16	52026351	52027370	chr16:52026351-52027370	0	-	52026351	52026351	8553170	2	93,382,	0,637,
#Partially deleted in new
chr16	52026351	52074951	chr16:52026351-52074951	1	-	52026351	52026351	8553170	8	93,59,42,45,53,75,61,59,	0,637,1003,8507,22403,25461,32016,48541,
#Partially deleted in new
chr16	52026351	52073902	chr16:52026351-52073902	1	-	52026351	52026351	8553170	6	93,59,42,45,61,115,	0,637,1003,8507,32016,47436,
#Deleted in new
chr16	52078621	52080489	chr16:52078621-52080489	3	+	52078621	52078621	8553170	2	47,424,	0,1444,
#Deleted in new
chr16	52081567	52082096	chr16:52081567-52082096	3	-	52081567	52081567	8553170	1	529,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	52083064	52085109	chr16:52083064-52085109	3	-	52083064	52083064	789624	3	1502,112,44,	0,1648,2001,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	52083064	52085109	chr16:52083064-52085109	0	-	52083064	52083064	8553170	2	1502,44,	0,2001,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	52085279	52099067	chr16:52085279-52099067	3	+	52085279	52085279	789624	3	127,115,768,	0,9679,13020,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	52198011	52227956	chr16:52198011-52227956	3	-	52198011	52198011	8553170	2	498,61,	0,29884,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	52238081	52269440	chr16:52238081-52269440	3	+	52238081	52238081	8553170	5	120,52,103,42,313,	0,2110,5322,16789,31046,
#Partially deleted in new
chr16	52258563	52280299	chr16:52258563-52280299	3	+	52258563	52258563	789624	3	20,82,284,	0,21045,21452,
#Partially deleted in new
chr16	52271571	52280638	chr16:52271571-52280638	1	+	52271571	52271571	8553170	3	299,134,369,	0,8037,8698,
#Deleted in new
chr16	52436771	52437474	chr16:52436771-52437474	3	-	52436771	52436771	8553170	1	703,	0,
#Partially deleted in new
chr16	52438004	52547802	chr16:52438004-52547802	1	-	52439224	52519480	789624	8	1964,81,228,270,252,66,174,89,	0,6271,7989,12272,25929,30504,81401,109709,
#Partially deleted in new
chr16	52438005	52445726	chr16:52438005-52445726	0	-	52438005	52438005	8553170	2	1963,1451,	0,6270,
#Partially deleted in new
chr16	52438007	52547008	chr16:52438007-52547008	3	-	52439224	52546723	789624	7	1961,81,228,270,255,66,372,	0,6268,7986,12269,25926,30501,108629,
#Partially deleted in new
chr16	52450347	52547419	chr16:52450347-52547419	0	-	52450347	52468553	789624	4	199,255,66,52,	0,13586,18161,97020,
#Partially deleted in new
chr16	52464017	52546840	chr16:52464017-52546840	0	-	52475544	52546723	789624	4	168,66,110,204,	0,4491,11513,82619,
#Deleted in new
chr16	52552089	52554179	chr16:52552089-52554179	0	-	52552089	52552089	8553170	2	345,116,	0,1974,
#Partially deleted in new
chr16	52552092	52606935	chr16:52552092-52606935	1	-	52552092	52552092	789624	4	342,49,132,432,	0,10721,38843,54411,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	52573178	52652105	chr16:52573178-52652105	3	-	52573178	52573178	8553170	5	166,132,97,61,154,	0,17757,57771,74873,78773,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	52583693	52588879	chr16:52583693-52588879	3	+	52583693	52583693	8553170	4	227,368,99,1222,	0,2365,3748,3964,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	52607348	52613894	chr16:52607348-52613894	3	+	52607348	52607348	8553170	3	190,125,242,	0,5223,6304,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	52607472	52611059	chr16:52607472-52611059	1	+	52607472	52607472	8553170	3	66,79,370,	0,1363,3217,
#Deleted in new
chr16	52607761	52608158	chr16:52607761-52608158	3	-	52607761	52607761	8553170	2	152,134,	0,263,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	52612454	52613908	chr16:52612454-52613908	0	+	52612454	52612454	8553170	2	242,256,	0,1198,
#Partially deleted in new
chr16	52622114	52629358	chr16:52622114-52629358	1	+	52622114	52622114	8553170	2	780,171,	0,7073,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	52622841	52631088	chr16:52622841-52631088	3	+	52622841	52622841	8553170	4	53,160,197,122,	0,7067,7845,8125,
#Deleted in new
chr16	52655306	52656045	chr16:52655306-52656045	7	+	52655306	52655306	16724991	1	739,	0,
#Deleted in new
chr16	52934812	52935635	chr16:52934812-52935635	7	+	52934812	52934812	16724991	1	823,	0,
#Deleted in new
chr16	52942138	52943005	chr16:52942138-52943005	7	+	52942138	52942138	16724991	1	867,	0,
#Deleted in new
chr16	52942780	52943464	chr16:52942780-52943464	5	+	52942780	52942780	16724991	1	684,	0,
#Deleted in new
chr16	53010394	53011286	chr16:53010394-53011286	7	-	53010394	53010394	16724991	1	892,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	53035689	53052873	chr16:53035689-53052873	0	-	53035689	53035689	789624	3	272,79,113,	0,11515,17071,
#Partially deleted in new
chr16	53042744	53052849	chr16:53042744-53052849	3	-	53043999	53044158	789624	3	1519,79,89,	0,4460,10016,
#Partially deleted in new
chr16	53055032	53327501	chr16:53055032-53327501	1	+	53156089	53324895	789624	39	45,1616,332,112,147,69,56,118,87,138,122,244,177,144,256,211,196,168,180,111,197,200,160,90,104,118,58,43,220,203,906,161,273,169,140,222,129,105,3482,	0,100893,154449,167611,171333,172363,172515,173950,176386,176614,180152,183310,187807,190303,190562,192260,194838,199405,200567,207954,212261,212894,218593,219180,230563,231193,232924,236692,237800,241923,248687,251204,252648,253653,259344,259790,263179,266493,268987,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr16	53055032	53329150	chr16:53055032-53329150	3	+	53156089	53324895	789624	39	45,1616,332,112,147,69,56,118,87,138,122,244,177,144,256,211,196,168,180,111,197,200,160,90,104,118,58,43,220,203,906,161,225,169,140,222,129,105,5131,	0,100893,154449,167611,171333,172363,172515,173950,176386,176614,180152,183310,187807,190303,190562,192260,194838,199405,200567,207954,212261,212894,218593,219180,230563,231193,232924,236692,237800,241923,248687,251204,252648,253653,259344,259790,263179,266493,268987,
#Partially deleted in new
chr16	53055032	53327501	chr16:53055032-53327501	1	+	53274231	53324895	789624	38	45,1616,332,112,147,69,56,118,87,138,122,244,177,144,256,211,196,168,180,111,197,200,160,90,104,118,58,43,220,203,161,273,169,140,222,129,105,3482,	0,100893,154449,167611,171333,172363,172515,173950,176386,176614,180152,183310,187807,190303,190562,192260,194838,199405,200567,207954,212261,212894,218593,219180,230563,231193,232924,236692,237800,241923,251204,252648,253653,259344,259790,263179,266493,268987,
#Partially deleted in new
chr16	53055038	53121980	chr16:53055038-53121980	0	+	53055038	53055038	8553170	2	39,681,	0,66261,
#Partially deleted in new
chr16	53099159	53222755	chr16:53099159-53222755	0	+	53156089	53222755	789624	4	109,1616,332,112,	0,56766,110322,123484,
#Partially deleted in new
chr16	53099179	53122178	chr16:53099179-53122178	0	+	53099179	53099179	8553170	2	89,879,	0,22120,
#Partially deleted in new
chr16	53130920	53327451	chr16:53130920-53327451	1	+	53156089	53324895	789624	39	138,1616,332,112,147,69,56,118,87,138,122,244,177,144,256,211,196,168,180,111,197,200,160,90,104,118,58,43,220,203,906,161,225,169,140,222,129,105,3432,	0,25005,78561,91723,95445,96475,96627,98062,100498,100726,104264,107422,111919,114415,114674,116372,118950,123517,124679,132066,136373,137006,142705,143292,154675,155305,157036,160804,161912,166035,172799,175316,176760,177765,183456,183902,187291,190605,193099,
#Partially deleted in new
chr16	53131133	53156248	chr16:53131133-53156248	0	+	53156089	53156248	789624	2	165,323,	0,24792,
#Partially deleted in new
chr16	53156002	53327451	chr16:53156002-53327451	1	+	53156089	53324895	789624	38	1539,332,112,147,69,56,118,87,138,122,244,177,144,256,211,196,168,180,111,197,200,160,90,104,118,58,43,220,203,906,161,273,169,140,222,129,105,3432,	0,53479,66641,70363,71393,71545,72980,75416,75644,79182,82340,86837,89333,89592,91290,93868,98435,99597,106984,111291,111924,117623,118210,129593,130223,131954,135722,136830,140953,147717,150234,151678,152683,158374,158820,162209,165523,168017,
#Deleted in new
chr16	53156005	53157462	chr16:53156005-53157462	0	+	53156089	53157462	789624	2	145,214,	0,1243,
#Partially deleted in new
chr16	53157163	53250175	chr16:53157163-53250175	0	+	53157163	53157163	8553170	16	378,332,112,147,69,56,118,87,138,122,244,177,144,256,211,305,	0,52318,65480,69202,70232,70384,71819,74255,74483,78021,81179,85676,88172,88431,90129,92707,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	53168521	53169450	chr16:53168521-53169450	3	+	53168521	53168521	8553170	2	241,269,	0,660,
#Partially deleted in new
chr16	53207988	53326856	chr16:53207988-53326856	1	+	53208317	53324895	789624	38	359,332,112,147,69,56,118,87,138,122,244,177,144,256,211,196,168,180,111,197,200,160,90,104,118,58,43,220,203,906,164,273,169,140,222,129,105,2837,	0,1493,14655,18377,19407,19559,20994,23430,23658,27196,30354,34851,37347,37606,39304,41882,46449,47611,54998,59305,59938,65637,66224,77607,78237,79968,83736,84844,88967,95731,98245,99692,100697,106388,106834,110223,113537,116031,
#Deleted in new
chr16	53208031	53209813	chr16:53208031-53209813	0	+	53208031	53208031	8553170	3	316,60,109,	0,1450,1673,
#Partially deleted in new
chr16	53208450	53222755	chr16:53208450-53222755	0	+	53209550	53222755	789624	3	259,332,112,	0,1031,14193,
#Partially deleted in new
chr16	53209779	53226403	chr16:53209779-53226403	0	+	53209779	53209779	8553170	4	34,112,58,38,	0,12864,13670,16586,
#Deleted in new
chr16	53227145	53227694	chr16:53227145-53227694	3	+	53227145	53227145	8553170	1	549,	0,
#Partially deleted in new
chr16	53235136	53327451	chr16:53235136-53327451	0	+	53235136	53235136	8553170	29	170,244,177,144,256,211,196,168,180,111,197,200,160,90,104,118,58,43,220,203,906,161,225,169,140,222,129,105,3432,	0,3206,7703,10199,10458,12156,14734,19301,20463,27850,32157,32790,38489,39076,50459,51089,52820,56588,57696,61819,68583,71100,72544,73549,79240,79686,83075,86389,88883,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	53235136	53248163	chr16:53235136-53248163	0	+	53235136	53235136	8553170	6	170,244,177,144,256,871,	0,3206,7703,10199,10458,12156,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	53245732	53250649	chr16:53245732-53250649	0	+	53245732	53245732	8553170	4	118,211,196,299,	0,1560,4138,4618,
#Partially deleted in new
chr16	53249900	53254671	chr16:53249900-53254671	0	+	53249900	53249900	8553170	2	166,234,	0,4537,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	53298223	53299792	chr16:53298223-53299792	7	+	53298223	53298223	16724991	1	1569,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	53310796	53311989	chr16:53310796-53311989	3	+	53310796	53310796	8553170	1	1193,	0,
#Partially deleted in new
chr16	53314505	53321563	chr16:53314505-53321563	0	+	53314505	53319818	789624	5	11,222,129,139,38,	0,317,3706,5307,7020,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	53314866	53324141	chr16:53314866-53324141	0	+	53314866	53321195	789624	5	178,129,55,105,122,	0,3345,6296,6659,9153,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	53337452	53337571	chr16:53337452-53337571	7	+	53337452	53337452	16724991	1	119,	0,
#Deleted in new
chr16	53362018	53363678	chr16:53362018-53363678	7	-	53362018	53362018	16724991	4	102,99,62,132,	0,189,371,1528,
#Partially deleted in new
chr16	53364981	53373083	chr16:53364981-53373083	7	-	53364981	53364981	16724991	6	37,142,131,147,685,76,	0,906,4507,5156,5653,8026,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	53366913	53371129	chr16:53366913-53371129	4	-	53366913	53366913	16724991	2	3382,410,	0,3806,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	53386943	53389085	chr16:53386943-53389085	3	+	53386943	53386943	8553170	1	2142,	0,
#Deleted in new
chr16	53389885	53390563	chr16:53389885-53390563	3	+	53389885	53389885	8553170	1	678,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	53391088	53392473	chr16:53391088-53392473	3	+	53391088	53391088	8553170	1	1385,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	53433976	53453463	chr16:53433976-53453463	0	+	53442679	53453463	789624	6	300,131,201,65,129,12,	0,5039,8681,13065,17726,19475,
#Partially deleted in new
chr16	53434419	53491649	chr16:53434419-53491649	3	+	53434556	53490300	0	22	377,131,201,65,129,161,65,187,167,110,104,138,165,112,270,281,177,72,106,203,165,1520,	0,4596,8238,12622,17283,19032,19285,20236,25031,27321,28132,29806,31018,32638,35496,35963,36326,44734,45466,46147,47251,55710,
#Partially deleted in new
chr16	53435618	53470079	chr16:53435618-53470079	0	+	53435726	53470079	789624	15	126,131,201,65,129,161,65,187,167,110,104,138,165,112,164,	0,3397,7039,11423,16084,17833,18086,19037,23832,26122,26933,28607,29819,31439,34297,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	53443227	53443332	chr16:53443227-53443332	3	-	53443227	53443227	8553170	1	105,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	53448747	53449590	chr16:53448747-53449590	3	+	53448747	53448747	8553170	2	608,98,	0,745,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	53461768	53464877	chr16:53461768-53464877	0	+	53461768	53461768	8553170	3	82,104,652,	0,783,2457,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	53464290	53466109	chr16:53464290-53466109	0	+	53464290	53464290	8553170	2	73,672,	0,1147,
#Partially deleted in new
chr16	53466773	53470257	chr16:53466773-53470257	0	+	53466773	53466773	8553170	2	396,342,	0,3142,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	53478956	53481550	chr16:53478956-53481550	3	-	53478956	53478956	8553170	1	2594,	0,
#Deleted in new
chr16	53479545	53480755	chr16:53479545-53480755	0	+	53479545	53479545	8553170	2	446,189,	0,1021,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	53487606	53489943	chr16:53487606-53489943	3	-	53487606	53487606	8553170	1	2337,	0,
#Partially deleted in new
chr16	53491039	53503251	chr16:53491039-53503251	3	-	53492411	53500259	789624	10	1480,61,108,99,89,101,65,206,112,105,	0,1653,3098,3299,3477,4033,4222,7351,9178,12107,
#Partially deleted in new
chr16	53491378	53503244	chr16:53491378-53503244	1	-	53492411	53500259	789624	11	1144,61,108,99,89,101,65,206,112,50,98,	0,1314,2759,2960,3138,3694,3883,7012,8839,10142,11768,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	53491647	53493968	chr16:53491647-53493968	0	-	53491647	53491647	8553170	1	2321,	0,
#Deleted in new
chr16	53491838	53492931	chr16:53491838-53492931	0	-	53491838	53491838	8553170	2	684,239,	0,854,
#Partially deleted in new
chr16	53492304	53503223	chr16:53492304-53503223	1	-	53492411	53500259	789624	10	215,61,108,99,89,101,65,206,112,106,	0,388,1833,2034,2212,2768,2957,6086,7913,10813,
#Partially deleted in new
chr16	53494215	53500329	chr16:53494215-53500329	0	-	53494215	53500259	789624	8	30,99,89,117,101,65,206,112,	0,123,301,623,857,1046,4175,6002,
#Partially deleted in new
chr16	53494570	53501769	chr16:53494570-53501769	0	-	53494570	53500259	789624	6	35,101,65,206,112,43,	0,502,691,3820,5647,7156,
#Partially deleted in new
chr16	53494778	53503206	chr16:53494778-53503206	0	-	53494778	53494778	8553170	5	395,65,206,112,60,	0,483,3612,5439,8368,
#Partially deleted in new
chr16	53495077	53504411	chr16:53495077-53504411	0	-	53495077	53500259	789624	5	96,65,206,112,83,	0,184,3313,5140,9251,
#Partially deleted in new
chr16	53495104	53503206	chr16:53495104-53503206	0	-	53495104	53500259	789624	5	69,65,206,112,507,	0,157,3286,5113,7595,
#Partially deleted in new
chr16	53495150	53503209	chr16:53495150-53503209	0	-	53495150	53495150	8553170	4	176,206,112,92,	0,3240,5067,7967,
#Partially deleted in new
chr16	53495150	53503206	chr16:53495150-53503206	0	-	53495150	53495150	8553170	4	176,206,112,60,	0,3240,5067,7996,
#Partially deleted in new
chr16	53498517	53501488	chr16:53498517-53501488	0	-	53498517	53500259	789624	3	79,112,383,	0,1700,2588,
#Partially deleted in new
chr16	53500217	53503230	chr16:53500217-53503230	0	-	53500217	53500259	789624	3	112,345,84,	0,2482,2929,
#Partially deleted in new
chr16	53598152	53703889	chr16:53598152-53703889	3	-	53602075	53700723	0	25	4036,134,85,184,74,160,84,191,379,152,453,118,180,51,107,140,74,147,106,144,103,299,145,92,87,	0,7328,12814,20872,38286,39542,42880,43132,47472,50811,54382,58319,59300,60261,60619,66717,73357,74717,76864,88280,89710,93913,97998,102486,105650,
#Partially deleted in new
chr16	53599911	53703859	chr16:53599911-53703859	1	-	53602075	53700723	789624	26	2277,134,85,184,74,160,102,84,191,379,152,453,118,180,51,107,140,74,147,106,144,103,299,145,92,57,	0,5569,11055,19113,36527,37783,38398,41121,41373,45713,49052,52623,56560,57541,58502,58860,64958,71598,72958,75105,86521,87951,92154,96239,100727,103891,
#Partially deleted in new
chr16	53605394	53703889	chr16:53605394-53703889	1	-	53605415	53700723	789624	25	220,85,184,74,160,102,84,191,379,152,453,118,180,51,107,140,74,147,106,144,103,299,145,92,87,	0,5572,13630,31044,32300,32915,35638,35890,40230,43569,47140,51077,52058,53019,53377,59475,66115,67475,69622,81038,82468,86671,90756,95244,98408,
#Deleted in new
chr16	53628255	53628816	chr16:53628255-53628816	3	-	53628255	53628255	8553170	1	561,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	53635440	53638374	chr16:53635440-53638374	0	-	53635440	53635440	8553170	4	183,74,160,65,	0,998,2254,2869,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	53653450	53659893	chr16:53653450-53659893	0	-	53653450	53653450	8553170	6	68,72,118,180,51,1122,	0,2077,3021,4002,4963,5321,
#Partially deleted in new
chr16	53671550	53703844	chr16:53671550-53703844	0	-	53671550	53700723	789624	9	33,147,106,144,103,299,145,88,42,	0,1319,3466,14882,16312,20515,24600,29088,32252,
#Partially deleted in new
chr16	53692226	53703830	chr16:53692226-53703830	0	-	53692226	53700723	789624	4	138,145,92,276,	0,3924,8412,11328,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	53693311	53703847	chr16:53693311-53703847	1	-	53695310	53700723	789624	4	2147,145,92,45,	0,2839,7327,10491,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	53695630	53703938	chr16:53695630-53703938	1	-	53696143	53700723	789624	3	665,92,136,	0,5008,8172,
#Partially deleted in new
chr16	53696212	53703810	chr16:53696212-53703810	0	-	53696212	53700723	789624	4	83,92,34,256,	0,4426,7015,7342,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	53701691	54008560	chr16:53701691-54008560	1	+	53711427	54008434	789624	10	130,94,78,628,144,80,144,120,125,133,	0,9669,108448,124172,142463,172094,178152,187140,232293,306736,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	53703962	54121941	chr16:53703962-54121941	3	+	53704184	54111915	0	9	267,78,628,144,80,144,120,125,10180,	0,106177,121901,140192,169823,175881,184869,230022,407799,
#Partially deleted in new
chr16	53703962	53937889	chr16:53703962-53937889	1	+	53704184	53937258	789624	9	267,78,628,144,80,144,120,125,641,	0,106177,121901,140192,169823,175881,184869,230022,233286,
#Partially deleted in new
chr16	53704068	53979499	chr16:53704068-53979499	1	+	53704184	53979452	789624	9	161,78,628,144,80,144,120,125,129,	0,106071,121795,140086,169717,175775,184763,229916,275302,
#Partially deleted in new
chr16	53704155	53825968	chr16:53704155-53825968	0	+	53704155	53704155	8553170	5	74,119,78,179,105,	0,60006,105984,110514,121708,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	53704156	54153406	chr16:53704156-54153406	1	+	53704184	54152225	789624	11	73,78,628,144,80,144,120,125,128,76,1293,	0,105983,121707,139998,169629,175687,184675,229828,407605,445530,447957,
#Partially deleted in new
chr16	53704157	54111835	chr16:53704157-54111835	0	+	53704184	54061665	789624	10	72,78,628,144,80,144,120,125,59,74,	0,105982,121706,139997,169628,175686,184674,229827,357504,407604,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	53704157	54121902	chr16:53704157-54121902	0	+	53704184	54118490	789624	11	72,78,628,144,80,144,120,125,128,426,527,	0,105982,121706,139997,169628,175686,184674,229827,407604,414223,417218,
#Partially deleted in new
chr16	53704181	54112087	chr16:53704181-54112087	0	+	53704184	53844244	789624	8	48,78,144,80,144,120,125,326,	0,105958,139973,169604,175662,184650,229803,407580,
#Partially deleted in new
chr16	53704184	53844241	chr16:53704184-53844241	1	+	53704184	53844241	789624	3	45,78,87,	0,105955,139970,
#Partially deleted in new
chr16	53826360	54040726	chr16:53826360-54040726	0	+	53826360	54039426	789624	8	131,144,80,144,120,125,90,1181,	0,17794,47425,53483,62471,107624,212984,213185,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	53879843	54153448	chr16:53879843-54153448	0	+	53879843	54152118	789624	5	144,120,125,128,1335,	0,8988,54141,231918,272270,
#Partially deleted in new
chr16	53886916	54112138	chr16:53886916-54112138	1	+	53888909	54111915	0	5	37,48,120,125,377,	0,952,1915,47068,224845,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	53886929	54112987	chr16:53886929-54112987	1	+	53888909	54111915	0	4	46,120,125,1226,	0,1902,47055,224832,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	53888893	53935847	chr16:53888893-53935847	0	+	53888893	53935587	789624	3	58,125,276,	0,45091,46678,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	53911255	54114463	chr16:53911255-54114463	1	+	53911379	54111915	0	3	229,125,2702,	0,22729,200506,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	53923055	54112632	chr16:53923055-54112632	0	+	53923055	53923055	8553170	3	89,125,871,	0,10929,188706,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	53934029	54114463	chr16:53934029-54114463	0	+	53934029	54112054	789624	3	80,17,2702,	0,50908,177732,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	53991011	53994454	chr16:53991011-53994454	3	+	53991011	53991011	8553170	1	3443,	0,
#Partially deleted in new
chr16	53998312	53999969	chr16:53998312-53999969	3	-	53998312	53998312	8553170	2	457,282,	0,1375,
#Partially deleted in new
chr16	54033996	54054583	chr16:54033996-54054583	3	-	54033996	54033996	8553170	3	115,110,56,	0,18553,20531,
#Partially deleted in new
chr16	54063636	54112302	chr16:54063636-54112302	0	+	54063636	54063636	8553170	2	306,541,	0,48125,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	54069895	54114439	chr16:54069895-54114439	0	+	54069895	54069895	8553170	2	2645,2678,	0,41866,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	54149689	54158512	chr16:54149689-54158512	0	+	54149689	54152225	789624	3	73,633,1399,	0,2424,7424,
#Deleted in new
chr16	54239692	54240654	chr16:54239692-54240654	3	+	54239692	54239692	8553170	2	310,141,	0,821,
#Partially deleted in new
chr16	54245617	54270746	chr16:54245617-54270746	0	-	54245617	54245617	789624	3	184,124,232,	0,1221,24897,
#Deleted in new
chr16	54283303	54286763	chr16:54283303-54286763	3	-	54283685	54286050	789624	4	437,67,1117,980,	0,942,1193,2480,
#Deleted in new
chr16	54283435	54285855	chr16:54283435-54285855	0	-	54283624	54285855	789624	3	305,67,72,	0,810,2348,
#Deleted in new
chr16	54284119	54286724	chr16:54284119-54286724	0	-	54284119	54284119	8553170	2	1494,46,	0,2559,
#Deleted in new
chr16	54285603	54289568	chr16:54285603-54289568	3	+	54285603	54285603	8553170	2	56,1008,	0,2957,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	54290964	54292422	chr16:54290964-54292422	3	+	54290964	54290964	8553170	1	1458,	0,
#Partially deleted in new
chr16	54366006	54370665	chr16:54366006-54370665	3	-	54366006	54366006	789624	2	1653,364,	0,4295,
#Partially deleted in new
chr16	54367366	54370699	chr16:54367366-54370699	0	-	54367366	54367366	8553170	2	293,134,	0,3199,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	54542807	54559100	chr16:54542807-54559100	3	-	54542807	54542807	8553170	6	944,307,150,107,169,55,	0,1945,2533,3219,13199,16238,
#Partially deleted in new
chr16	54628962	54657662	chr16:54628962-54657662	3	-	54628962	54628962	8553170	5	636,270,131,132,137,	0,2473,4004,4270,28563,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	54631756	54634337	chr16:54631756-54634337	1	-	54631756	54631756	8553170	3	1341,132,103,	0,1476,2478,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	54845188	54848278	chr16:54845188-54848278	1	-	54845188	54845188	8553170	3	233,175,138,	0,2210,2952,
#Deleted in new
chr16	54847246	54848233	chr16:54847246-54848233	0	-	54847246	54847246	789624	2	327,93,	0,894,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	54851639	54925144	chr16:54851639-54925144	3	-	54851639	54851639	8553170	6	1929,136,264,162,66,44,	0,24619,39762,41682,71945,73461,
#Partially deleted in new
chr16	54918862	54928551	chr16:54918862-54928551	1	-	54918862	54918862	8553170	5	347,30,66,113,58,	0,1435,4722,6238,9631,
#Partially deleted in new
chr16	54918863	54928551	chr16:54918863-54928551	0	-	54918863	54918863	789624	5	346,113,66,113,58,	0,1434,4721,6237,9630,
#Partially deleted in new
chr16	54918869	54928796	chr16:54918869-54928796	0	-	54918869	54918869	789624	5	340,113,66,113,27,	0,1428,4715,6231,9900,
#Deleted in new
chr16	54918869	54920616	chr16:54918869-54920616	0	-	54918869	54918869	8553170	2	340,319,	0,1428,
#Partially deleted in new
chr16	54919053	54923779	chr16:54919053-54923779	0	-	54919053	54919053	8553170	3	156,113,195,	0,1244,4531,
#Partially deleted in new
chr16	54919065	54928716	chr16:54919065-54928716	1	-	54919065	54919065	789624	5	144,41,66,113,223,	0,1232,4519,6035,9428,
#Partially deleted in new
chr16	54919172	54928812	chr16:54919172-54928812	1	-	54919172	54919172	789624	6	37,113,66,87,113,43,	0,1125,4412,5428,5928,9597,
#Deleted in new
chr16	54923280	54928886	chr16:54923280-54928886	0	-	54923280	54923280	8553170	3	370,113,117,	0,1820,5489,
#Deleted in new
chr16	54924858	54929149	chr16:54924858-54929149	0	-	54924858	54924858	8553170	2	355,380,	0,3911,
#Deleted in new
chr16	54925152	54929189	chr16:54925152-54929189	0	-	54925152	54925152	8553170	2	61,420,	0,3617,
#Deleted in new
chr16	54930861	54934485	chr16:54930861-54934485	3	+	54931198	54933873	789624	3	586,406,1409,	0,1636,2215,
#Deleted in new
chr16	54931198	54934485	chr16:54931198-54934485	1	+	54931198	54933873	789624	3	249,406,1406,	0,1299,1881,
#Deleted in new
chr16	54931198	54933960	chr16:54931198-54933960	1	+	54931198	54933873	789624	3	249,156,474,	0,855,2288,
#Deleted in new
chr16	54931198	54933960	chr16:54931198-54933960	1	+	54931198	54933520	789624	4	249,156,12,464,	0,855,1299,2298,
#Deleted in new
chr16	54932071	54934069	chr16:54932071-54934069	0	+	54932071	54932071	8553170	2	832,993,	0,1005,
#Partially deleted in new
chr16	54934912	54954665	chr16:54934912-54954665	3	+	54934912	54934912	8553170	2	179,180,	0,19573,
#Deleted in new
chr16	54937785	54938671	chr16:54937785-54938671	3	-	54937785	54937785	8553170	2	270,287,	0,599,
#Deleted in new
chr16	54938030	54938671	chr16:54938030-54938671	1	-	54938030	54938030	8553170	2	25,508,	0,133,
#Deleted in new
chr16	55007981	55008306	chr16:55007981-55008306	7	+	55007981	55007981	16724991	1	325,	0,
#Deleted in new
chr16	55045699	55049318	chr16:55045699-55049318	3	-	55045699	55045699	8553170	3	288,427,203,	0,874,3416,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	55259968	55333588	chr16:55259968-55333588	3	-	55259968	55259968	8553170	4	461,87,127,88,	0,6739,22569,73532,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	55291378	55291675	chr16:55291378-55291675	3	-	55291378	55291378	8553170	1	297,	0,
#Deleted in new
chr16	55321574	55322686	chr16:55321574-55322686	3	-	55321574	55321574	8553170	3	243,311,27,	0,410,1085,
#Partially deleted in new
chr16	55323759	55330760	chr16:55323759-55330760	3	+	55325091	55330305	789624	6	1377,258,110,308,612,463,	0,2576,3536,3826,4940,6538,
#Partially deleted in new
chr16	55325799	55327796	chr16:55325799-55327796	0	+	55325799	55325799	8553170	5	211,258,60,110,211,	0,536,1077,1496,1786,
#Deleted in new
chr16	55332354	55332967	chr16:55332354-55332967	3	+	55332354	55332354	8553170	1	613,	0,
#Deleted in new
chr16	55352720	55353088	chr16:55352720-55353088	7	-	55352720	55352720	16724991	1	368,	0,
#Partially deleted in new
chr16	55389699	55506237	chr16:55389699-55506237	1	+	55482983	55505442	0	14	336,274,227,149,129,174,174,174,156,136,137,160,110,899,	0,74852,93209,94316,95599,95904,98843,99951,102101,103458,107226,108589,113079,115639,
#Deleted in new
chr16	55425573	55426130	chr16:55425573-55426130	3	-	55425573	55425573	8553170	1	557,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	55426796	55427951	chr16:55426796-55427951	1	-	55426796	55426796	8553170	2	174,451,	0,704,
#Partially deleted in new
chr16	55427557	55462297	chr16:55427557-55462297	3	-	55427557	55427557	8553170	6	27,120,109,85,89,123,	0,1803,16555,19306,25214,34617,
#Partially deleted in new
chr16	55429134	55444759	chr16:55429134-55444759	1	-	55429134	55429134	8553170	3	346,109,138,	0,14978,15487,
#Partially deleted in new
chr16	55478829	55485352	chr16:55478829-55485352	0	+	55482983	55485352	789624	4	136,227,149,54,	0,4079,5186,6469,
#Partially deleted in new
chr16	55478970	55506691	chr16:55478970-55506691	3	+	55479479	55505442	0	13	662,227,149,129,174,174,174,156,136,137,160,110,1353,	0,3938,5045,6328,6633,9572,10680,12830,14187,17955,19318,23808,26368,
#Partially deleted in new
chr16	55479997	55485776	chr16:55479997-55485776	0	+	55482983	55485776	789624	5	58,227,149,129,173,	0,2911,4018,5301,5606,
#Partially deleted in new
chr16	55480532	55505525	chr16:55480532-55505525	1	+	55482983	55505442	0	13	65,227,149,129,174,174,174,156,136,137,160,110,187,	0,2376,3483,4766,5071,8010,9118,11268,12625,16393,17756,22246,24806,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	55481556	55505759	chr16:55481556-55505759	1	+	55481875	55505442	0	13	322,227,149,129,174,174,174,156,136,137,160,110,421,	0,1352,2459,3742,4047,6986,8094,10244,11601,15369,16732,21222,23782,
#Deleted in new
chr16	55486617	55488777	chr16:55486617-55488777	3	+	55486617	55486617	8553170	1	2160,	0,
#Partially deleted in new
chr16	55488661	55502889	chr16:55488661-55502889	0	+	55488661	55502889	789624	6	55,156,136,137,160,111,	0,3139,4496,8264,9627,14117,
#Deleted in new
chr16	55505374	55506239	chr16:55505374-55506239	0	+	55505374	55505442	789624	2	205,238,	0,627,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	55508997	55586670	chr16:55508997-55586670	3	+	55509181	55583098	789624	14	355,140,218,113,61,59,35,55,83,126,154,99,136,3757,	0,16510,19379,20837,22916,23826,25445,28580,36737,40279,41951,65633,70111,73916,
#Partially deleted in new
chr16	55509071	55526058	chr16:55509071-55526058	0	+	55509071	55509071	8553170	2	281,551,	0,16436,
#Partially deleted in new
chr16	55528492	55542028	chr16:55528492-55542028	0	+	55528492	55541978	789624	7	102,113,61,59,35,55,191,	0,1342,3421,4331,5950,9085,13345,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	55532038	55586666	chr16:55532038-55586666	0	+	55532038	55532038	8553170	9	844,35,55,83,126,154,99,136,3753,	0,2404,5539,13696,17238,18910,42592,47070,50875,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	55538199	55542027	chr16:55538199-55542027	3	+	55538199	55538199	8553170	1	3828,	0,
#Partially deleted in new
chr16	55545484	55574729	chr16:55545484-55574729	0	+	55545484	55545484	8553170	4	333,126,154,99,	0,3792,5464,29146,
#Partially deleted in new
chr16	55549305	55551333	chr16:55549305-55551333	0	+	55549305	55549305	8553170	2	97,385,	0,1643,
#Partially deleted in new
chr16	55556922	55583012	chr16:55556922-55583012	0	+	55556922	55556922	8553170	4	89,99,136,99,	0,17708,22186,25991,
#Deleted in new
chr16	55566671	55567687	chr16:55566671-55567687	3	+	55566756	55567503	789624	1	1016,	0,
#Partially deleted in new
chr16	55579017	55583237	chr16:55579017-55583237	0	+	55579017	55579017	8553170	2	227,324,	0,3896,
#Partially deleted in new
chr16	55655603	55702346	chr16:55655603-55702346	1	+	55656694	55702346	789624	15	566,325,132,238,139,135,104,125,113,129,100,101,168,72,24,	0,1040,13961,16334,29539,36314,38406,39674,40621,42293,42865,43950,44535,46259,46719,
#Partially deleted in new
chr16	55656085	55694113	chr16:55656085-55694113	0	+	55656694	55694113	789624	6	84,325,132,238,139,104,	0,558,13479,15852,29057,37924,
#Partially deleted in new
chr16	55656109	55703750	chr16:55656109-55703750	1	+	55656694	55702346	789624	14	60,325,132,238,139,135,104,125,113,129,100,101,72,1428,	0,534,13455,15828,29033,35808,37900,39168,40115,41787,42359,43444,45753,46213,
#Partially deleted in new
chr16	55656253	55672131	chr16:55656253-55672131	0	+	55656694	55672131	789624	4	99,325,132,194,	0,390,13311,15684,
#Partially deleted in new
chr16	55656439	55703788	chr16:55656439-55703788	3	+	55656694	55702346	789624	14	529,132,238,139,135,104,125,113,129,100,101,168,72,1466,	0,13125,15498,28703,35478,37570,38838,39785,41457,42029,43114,43699,45423,45883,
#Partially deleted in new
chr16	55656617	55705648	chr16:55656617-55705648	1	+	55656694	55705272	789624	13	351,132,238,139,135,104,125,113,129,100,101,168,433,	0,12947,15320,28525,35300,37392,38660,39607,41279,41851,42936,43521,48598,
#Partially deleted in new
chr16	55656643	55706192	chr16:55656643-55706192	1	+	55656694	55705272	789624	14	325,132,238,139,135,104,125,113,129,100,101,168,72,977,	0,12921,15294,28499,35274,37366,38634,39581,41253,41825,42910,43495,45219,48572,
#Partially deleted in new
chr16	55656654	55702346	chr16:55656654-55702346	1	+	55656694	55702346	789624	13	314,132,238,139,104,125,113,129,100,101,168,72,24,	0,12910,15283,28488,37355,38623,39570,41242,41814,42899,43484,45208,45668,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	55671670	55703791	chr16:55671670-55703791	1	+	55671846	55702346	789624	12	505,139,135,104,125,113,129,100,101,168,72,1469,	0,13472,20247,22339,23607,24554,26226,26798,27883,28468,30192,30652,
#Partially deleted in new
chr16	55700273	55705853	chr16:55700273-55705853	0	+	55700273	55705286	789624	3	33,72,638,	0,1589,4942,
#Deleted in new
chr16	55704118	55706422	chr16:55704118-55706422	3	+	55704118	55704118	8553170	1	2304,	0,
#Partially deleted in new
chr16	55728114	55750111	chr16:55728114-55750111	7	+	55728114	55728114	16724991	11	147,134,60,105,39,141,81,148,132,73,182,	0,2217,3177,5291,8239,12288,14322,14665,18643,21446,21815,
#Partially deleted in new
chr16	55760565	55773511	chr16:55760565-55773511	5	+	55760565	55760565	16724991	6	128,208,145,134,154,108,	0,4131,6799,9396,11803,12838,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	55760598	55774926	chr16:55760598-55774926	4	+	55760598	55760598	16724991	6	95,208,145,134,154,1523,	0,4098,6766,9363,11770,12805,
#Partially deleted in new
chr16	55760600	55773921	chr16:55760600-55773921	4	+	55760600	55760600	16724991	5	93,145,134,154,518,	0,6764,9361,11768,12803,
#Partially deleted in new
chr16	55760641	55793960	chr16:55760641-55793960	7	+	55760641	55760641	16724991	14	52,208,145,134,154,108,105,39,141,81,148,132,73,184,	0,4055,6723,9320,11727,12762,16149,19060,22957,24971,25315,29903,32766,33135,
#Partially deleted in new
chr16	55802850	55812974	chr16:55802850-55812974	0	-	55806401	55812974	789624	4	382,73,132,72,	0,678,3482,10052,
#Partially deleted in new
chr16	55802852	55833158	chr16:55802852-55833158	3	-	55803048	55833055	0	14	380,73,132,148,84,141,39,105,108,154,134,145,208,155,	0,676,3480,7664,8074,10050,14071,16682,17519,18515,20697,23298,25914,30151,
#Partially deleted in new
chr16	55802853	55833337	chr16:55802853-55833337	1	-	55803048	55833055	0	14	379,73,132,148,81,141,39,105,108,154,134,145,205,334,	0,675,3479,7663,8073,10049,14070,16681,17518,18514,20696,23297,25913,30150,
#Partially deleted in new
chr16	55802935	55810655	chr16:55802935-55810655	0	-	55803048	55810655	789624	3	297,73,139,	0,593,7581,
#Partially deleted in new
chr16	55803048	55833186	chr16:55803048-55833186	1	-	55803048	55833055	0	14	184,73,132,148,84,141,39,105,108,154,134,145,205,183,	0,480,3284,7468,7878,9854,13875,16486,17323,18319,20501,23102,25718,29955,
#Partially deleted in new
chr16	55810570	55819580	chr16:55810570-55819580	0	-	55812403	55819580	789624	6	94,84,95,141,39,46,	0,356,1765,2332,6353,8964,
#Partially deleted in new
chr16	55820003	55833096	chr16:55820003-55833096	0	-	55820003	55820003	8553170	5	476,154,134,145,93,	0,1364,3546,6147,13000,
#Partially deleted in new
chr16	55820328	55833104	chr16:55820328-55833104	0	-	55820328	55820328	8553170	4	151,154,134,101,	0,1039,3221,12675,
#Partially deleted in new
chr16	55821428	55828175	chr16:55821428-55828175	0	-	55821428	55821428	8553170	4	93,134,145,287,	0,2121,4722,6460,
#Partially deleted in new
chr16	55846153	55925426	chr16:55846153-55925426	0	-	55869606	55871723	789624	13	529,73,150,148,69,141,105,105,154,266,139,205,104,	0,614,3470,6727,10223,13393,15258,17194,19809,23325,25471,27679,79169,
#Partially deleted in new
chr16	55846153	55956031	chr16:55846153-55956031	1	-	55846450	55955885	789624	14	529,73,150,148,69,141,105,105,154,134,139,205,118,188,	0,614,3470,6727,10223,13393,15258,17194,19809,23457,25471,27679,103631,109690,
#Partially deleted in new
chr16	55846161	55875370	chr16:55846161-55875370	1	-	55846450	55875221	789624	12	521,73,148,69,141,105,105,154,134,139,205,222,	0,606,6719,10215,13385,15250,17186,19801,23449,25463,27671,28987,
#Partially deleted in new
chr16	55846161	55925460	chr16:55846161-55925460	1	-	55846450	55871723	789624	13	521,73,150,148,69,141,105,105,154,134,139,215,138,	0,606,3462,6719,10215,13385,15250,17186,19801,23449,25463,27661,79161,
#Partially deleted in new
chr16	55846216	55875343	chr16:55846216-55875343	3	-	55846450	55875221	789624	13	466,73,150,148,69,141,105,105,154,134,139,205,195,	0,551,3407,6664,10160,13330,15195,17131,19746,23394,25408,27616,28932,
#Partially deleted in new
chr16	55846218	55875299	chr16:55846218-55875299	1	-	55846450	55875221	789624	13	464,73,150,148,69,141,105,105,154,134,49,205,151,	0,549,3405,6662,10158,13328,15193,17129,19744,23392,25496,27614,28930,
#Partially deleted in new
chr16	55846218	55944464	chr16:55846218-55944464	1	-	55846450	55944095	789624	9	464,73,150,148,66,141,105,105,417,	0,549,3405,6662,10158,13328,15193,17129,97829,
#Partially deleted in new
chr16	55846393	55871841	chr16:55846393-55871841	0	-	55846393	55846393	8553170	8	289,73,150,148,141,105,134,27,	0,374,3230,6487,13153,16954,23217,25421,
#Partially deleted in new
chr16	55869618	55925426	chr16:55869618-55925426	0	-	55869618	55871723	789624	4	126,139,205,104,	0,2006,4214,55704,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	56092986	56191094	chr16:56092986-56191094	3	-	56092986	56092986	789624	5	532,167,288,98,1593,	0,8059,9045,94616,96515,
#Deleted in new
chr16	56108979	56109970	chr16:56108979-56109970	3	+	56108979	56108979	8553170	1	991,	0,
#Partially deleted in new
chr16	56109536	56136743	chr16:56109536-56136743	3	+	56109536	56109536	8553170	3	299,63,97,	0,15437,27110,
#Partially deleted in new
chr16	56121914	56137000	chr16:56121914-56137000	1	+	56121914	56121914	8553170	3	118,63,354,	0,3059,14732,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	56169678	56190007	chr16:56169678-56190007	1	-	56169678	56169678	8553170	2	382,506,	0,19823,
#Partially deleted in new
chr16	56183604	56189597	chr16:56183604-56189597	0	-	56183604	56183604	8553170	2	558,96,	0,5897,
#Deleted in new
chr16	56183725	56186306	chr16:56183725-56186306	1	-	56183725	56183725	8553170	2	437,358,	0,2223,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	56187073	56188078	chr16:56187073-56188078	0	-	56187073	56187073	8553170	2	627,38,	0,967,
#Partially deleted in new
chr16	56191346	56357457	chr16:56191346-56357457	3	+	56192235	56355053	789624	9	1007,43,142,161,129,130,154,216,1355,	0,1227,84584,137284,143382,145384,160037,163519,164756,
#Deleted in new
chr16	56191546	56192696	chr16:56191546-56192696	1	+	56192235	56192620	789624	2	807,123,	0,1027,
#Partially deleted in new
chr16	56191733	56357015	chr16:56191733-56357015	1	+	56192235	56355053	789624	8	620,43,142,161,129,130,154,2150,	0,840,84197,136897,142995,144997,159650,163132,
#Partially deleted in new
chr16	56191782	56348199	chr16:56191782-56348199	1	+	56192235	56343950	789624	8	571,43,142,161,129,130,154,4437,	0,791,84148,136848,142946,144948,149051,151980,
#Partially deleted in new
chr16	56191964	56213407	chr16:56191964-56213407	1	+	56192235	56213365	789624	3	389,43,136,	0,609,21307,
#Partially deleted in new
chr16	56192142	56277027	chr16:56192142-56277027	1	+	56192235	56276084	789624	3	211,43,1097,	0,431,83788,
#Partially deleted in new
chr16	56192220	56329238	chr16:56192220-56329238	0	+	56192220	56192220	8553170	4	133,43,142,608,	0,353,83710,136410,
#Partially deleted in new
chr16	56192234	56357212	chr16:56192234-56357212	0	+	56192235	56336739	789624	8	119,43,142,129,130,154,216,1110,	0,339,83696,142494,144496,159149,162631,163868,
#Partially deleted in new
chr16	56192268	56356486	chr16:56192268-56356486	0	+	56192268	56255578	789624	10	85,43,71,142,161,129,130,154,216,384,	0,305,63252,83662,136362,142460,144462,159115,162597,163834,
#Partially deleted in new
chr16	56192492	56334776	chr16:56192492-56334776	0	+	56192492	56192492	8553170	5	124,372,142,161,48,	0,42520,83438,136138,142236,
#Partially deleted in new
chr16	56192545	56356741	chr16:56192545-56356741	0	+	56192545	56192545	8553170	8	71,142,161,129,130,154,216,639,	0,83385,136085,142183,144185,158838,162320,163557,
#Partially deleted in new
chr16	56192554	56355152	chr16:56192554-56355152	0	+	56192554	56192554	8553170	7	62,142,161,129,130,154,287,	0,83376,136076,142174,144176,158829,162311,
#Deleted in new
chr16	56192613	56194518	chr16:56192613-56194518	3	-	56192613	56192613	789624	1	1905,	0,
#Partially deleted in new
chr16	56193621	56357136	chr16:56193621-56357136	0	+	56193621	56193621	8553170	7	91,142,161,129,130,154,2271,	0,82309,135009,141107,143109,157762,161244,
#Partially deleted in new
chr16	56194085	56357377	chr16:56194085-56357377	0	+	56194085	56194085	8553170	8	461,142,161,129,130,154,216,1275,	0,81845,134545,140643,142645,157298,160780,162017,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	56226378	56334775	chr16:56226378-56334775	0	+	56226378	56226378	8553170	4	193,142,161,47,	0,49552,102252,108350,
#Partially deleted in new
chr16	56235008	56354935	chr16:56235008-56354935	0	+	56235008	56235008	8553170	7	376,142,161,129,130,154,70,	0,40922,93622,99720,101722,116375,119857,
#Deleted in new
chr16	56245519	56245623	chr16:56245519-56245623	3	+	56245519	56245519	5263520	1	104,	0,
#Partially deleted in new
chr16	56270238	56354939	chr16:56270238-56354939	0	+	56270238	56270238	8553170	7	882,142,161,129,130,154,74,	0,5692,58392,64490,66492,81145,84627,
#Partially deleted in new
chr16	56276005	56355182	chr16:56276005-56355182	0	+	56276005	56336731	789624	5	67,161,130,154,317,	0,52625,60725,75378,78860,
#Deleted in new
chr16	56300615	56302904	chr16:56300615-56302904	3	+	56300615	56300615	8553170	2	575,1202,	0,1087,
#Deleted in new
chr16	56306844	56308335	chr16:56306844-56308335	3	+	56306844	56306844	8553170	1	1491,	0,
#Partially deleted in new
chr16	56328660	56356347	chr16:56328660-56356347	0	+	56328660	56356146	789624	5	131,129,130,154,245,	0,6068,8070,22723,27442,
#Partially deleted in new
chr16	56334739	56356379	chr16:56334739-56356379	0	+	56334739	56355053	789624	6	118,130,154,216,73,277,	0,1991,16644,20126,20516,21363,
#Partially deleted in new
chr16	56336361	56356832	chr16:56336361-56356832	0	+	56336361	56336361	8553170	3	499,154,1967,	0,15022,18504,
#Partially deleted in new
chr16	56336745	56355132	chr16:56336745-56355132	0	+	56336745	56354958	789624	2	115,267,	0,18120,
#Partially deleted in new
chr16	56336773	56355439	chr16:56336773-56355439	0	+	56336773	56355053	789624	4	87,154,216,184,	0,14610,18092,18482,
#Partially deleted in new
chr16	56336833	56356131	chr16:56336833-56356131	0	+	56336833	56356129	789624	4	27,154,122,29,	0,14550,18032,19269,
#Partially deleted in new
chr16	56339762	56344311	chr16:56339762-56344311	0	+	56339762	56339762	8553170	3	68,154,549,	0,1071,4000,
#Partially deleted in new
chr16	56340295	56348132	chr16:56340295-56348132	0	+	56340295	56340295	8553170	2	692,4370,	0,3467,
#Deleted in new
chr16	56351885	56353524	chr16:56351885-56353524	3	-	56351885	56351885	8553170	1	1639,	0,
#Partially deleted in new
chr16	56361451	56425538	chr16:56361451-56425538	3	-	56362908	56425327	0	14	1605,185,84,135,104,191,111,134,133,41,153,165,93,466,	0,2469,5992,7741,24467,27733,40281,41533,43457,43752,46512,47972,52800,63621,
#Partially deleted in new
chr16	56361559	56403117	chr16:56361559-56403117	0	-	56362908	56403117	789624	7	1497,185,84,135,104,111,133,	0,2361,5884,7633,24359,40173,41425,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	56362001	56363845	chr16:56362001-56363845	0	-	56362001	56362001	8553170	1	1844,	0,
#Partially deleted in new
chr16	56362022	56364116	chr16:56362022-56364116	0	-	56362022	56362022	8553170	2	1034,196,	0,1898,
#Partially deleted in new
chr16	56362915	56367603	chr16:56362915-56367603	0	-	56362915	56362915	8553170	3	141,185,160,	0,1005,4528,
#Partially deleted in new
chr16	56367290	56385972	chr16:56367290-56385972	0	-	56367290	56367290	8553170	3	237,135,54,	0,1902,18628,
#Partially deleted in new
chr16	56385641	56401775	chr16:56385641-56401775	0	-	56385641	56385641	8553170	2	381,43,	0,16091,
#Partially deleted in new
chr16	56402985	56424995	chr16:56402985-56424995	0	-	56402985	56414314	789624	7	133,133,41,153,165,93,85,	0,1923,2218,4978,6438,11266,21925,
#Partially deleted in new
chr16	56404967	56424871	chr16:56404967-56424871	0	-	56404967	56414314	789624	6	74,41,153,165,93,41,	0,236,2996,4456,9284,19863,
#Partially deleted in new
chr16	56408007	56424978	chr16:56408007-56424978	0	-	56408007	56408007	8553170	4	213,165,93,68,	0,1416,6244,16903,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	56409319	56411683	chr16:56409319-56411683	3	+	56409319	56409319	8553170	2	294,255,	0,2109,
#Partially deleted in new
chr16	56414320	56424195	chr16:56414320-56424195	0	-	56414320	56414320	8553170	2	24,526,	0,9349,
#Partially deleted in new
chr16	56429132	56451375	chr16:56429132-56451375	3	-	56432711	56451202	0	7	3601,115,76,90,64,201,289,	0,5198,5621,10524,17493,18656,21954,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	56434326	56435212	chr16:56434326-56435212	0	-	56434326	56434326	8553170	2	119,459,	0,427,
#Partially deleted in new
chr16	56434345	56452199	chr16:56434345-56452199	0	-	56434345	56447907	789624	6	100,76,90,64,201,50,	0,408,5311,12280,13443,17804,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	56439126	56439735	chr16:56439126-56439735	0	-	56439126	56439126	8553170	2	370,79,	0,530,
#Partially deleted in new
chr16	56439716	56449259	chr16:56439716-56449259	0	-	56439716	56447907	789624	4	30,64,201,90,	0,6909,8072,9453,
#Partially deleted in new
chr16	56446503	56447047	chr16:56446503-56447047	0	-	56446503	56446503	8553170	1	544,	0,
#Partially deleted in new
chr16	56447647	56451351	chr16:56447647-56451351	0	-	56447647	56447647	8553170	2	342,265,	0,3439,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	56451489	56479100	chr16:56451489-56479100	3	+	56451612	56476205	0	13	277,146,47,101,117,92,129,114,80,305,123,59,3057,	0,1773,7058,11044,14662,15386,15675,16415,18513,18997,23338,24017,24554,
#Partially deleted in new
chr16	56451520	56467198	chr16:56451520-56467198	0	+	56453273	56467198	789624	7	47,146,47,101,117,92,34,	0,1742,7027,11013,14631,15355,15644,
#Partially deleted in new
chr16	56451520	56466203	chr16:56451520-56466203	0	+	56451612	56466203	789624	5	240,146,47,101,52,	0,1742,7027,11013,14631,
#Partially deleted in new
chr16	56451520	56466183	chr16:56451520-56466183	0	+	56453273	56454779	789624	5	47,146,148,101,32,	0,1742,3253,11013,14631,
#Partially deleted in new
chr16	56451522	56462628	chr16:56451522-56462628	0	+	56451612	56458542	789624	4	244,146,82,95,	0,1740,6990,11011,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	56451523	56477129	chr16:56451523-56477129	0	+	56453273	56458560	789624	13	44,118,47,101,117,92,129,114,80,305,123,59,1086,	0,1739,7024,11010,14628,15352,15641,16381,18479,18963,23304,23983,24520,
#Partially deleted in new
chr16	56451532	56458901	chr16:56451532-56458901	0	+	56451532	56451532	8553170	3	234,146,354,	0,1730,7015,
#Partially deleted in new
chr16	56451539	56466268	chr16:56451539-56466268	0	+	56451539	56451539	8553170	4	227,146,47,117,	0,1723,7008,14612,
#Deleted in new
chr16	56451555	56453693	chr16:56451555-56453693	0	+	56451555	56451555	8553170	2	211,431,	0,1707,
#Partially deleted in new
chr16	56451561	56476335	chr16:56451561-56476335	1	+	56451612	56476205	789624	12	205,146,47,101,117,92,114,80,305,123,59,292,	0,1701,6986,10972,14590,15314,16343,18441,18925,23266,23945,24482,
#Partially deleted in new
chr16	56458128	56466179	chr16:56458128-56466179	0	+	56458128	56458128	8553170	3	466,101,28,	0,4405,8023,
#Deleted in new
chr16	56465641	56466162	chr16:56465641-56466162	3	-	56465641	56465641	8553170	1	521,	0,
#Partially deleted in new
chr16	56466835	56485738	chr16:56466835-56485738	0	-	56484760	56485738	789624	3	139,107,149,	0,17925,18754,
#Partially deleted in new
chr16	56470402	56497802	chr16:56470402-56497802	0	-	56484760	56497802	789624	5	212,107,149,113,60,	0,14358,15187,26564,27340,
#Partially deleted in new
chr16	56484344	56520041	chr16:56484344-56520041	1	-	56484760	56519862	789624	16	523,149,113,132,130,172,145,140,136,87,105,78,63,126,228,296,	0,1245,12622,14092,15433,16509,17008,17972,18328,21605,21775,25612,26514,26814,30108,35401,
#Partially deleted in new
chr16	56484384	56520283	chr16:56484384-56520283	3	-	56484760	56519862	789624	17	483,149,113,138,132,130,172,145,140,136,87,105,78,63,126,228,538,	0,1205,12582,13358,14052,15393,16469,16968,17932,18288,21565,21735,25572,26474,26774,30068,35361,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	56484384	56520087	chr16:56484384-56520087	0	-	56484384	56484384	8553170	12	483,149,113,138,4372,87,105,78,63,126,228,131,	0,1205,12582,13358,14052,21565,21735,25572,26474,26774,30068,35572,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	56484387	56500919	chr16:56484387-56500919	0	-	56484387	56484387	8553170	4	480,149,914,2483,	0,1202,12579,14049,
#Partially deleted in new
chr16	56485606	56499978	chr16:56485606-56499978	0	-	56485606	56485606	8553170	5	132,113,138,132,201,	0,11360,12136,12830,14171,
#Partially deleted in new
chr16	56497742	56501594	chr16:56497742-56501594	0	-	56497742	56497742	8553170	5	138,132,130,124,242,	0,694,2035,3111,3610,
#Partially deleted in new
chr16	56497775	56500946	chr16:56497775-56500946	0	-	56498690	56500946	789624	4	105,260,130,93,	0,661,2002,3078,
#Deleted in new
chr16	56498489	56499923	chr16:56498489-56499923	0	-	56498489	56498489	8553170	2	204,146,	0,1288,
#Partially deleted in new
chr16	56499700	56500945	chr16:56499700-56500945	0	-	56499700	56499700	8553170	2	207,92,	0,1153,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	56499785	56501176	chr16:56499785-56501176	0	-	56499785	56499785	8553170	2	122,323,	0,1068,
#Partially deleted in new
chr16	56499831	56509989	chr16:56499831-56509989	0	-	56502428	56509989	789624	8	76,172,145,140,107,87,105,33,	0,1022,1521,2485,2870,6118,6288,10125,
#Partially deleted in new
chr16	56500881	56501806	chr16:56500881-56501806	0	-	56500881	56500881	8553170	2	144,454,	0,471,
#Partially deleted in new
chr16	56501402	56519996	chr16:56501402-56519996	0	-	56501402	56501402	8553170	9	95,492,87,105,78,63,126,228,251,	0,914,4547,4717,8554,9456,9756,13050,18343,
#Partially deleted in new
chr16	56501646	56511278	chr16:56501646-56511278	0	-	56501646	56501646	8553170	8	116,140,136,87,105,78,63,120,	0,670,1026,4303,4473,8310,9212,9512,
#Partially deleted in new
chr16	56502221	56506163	chr16:56502221-56506163	0	-	56502221	56502221	8553170	4	235,107,87,44,	0,480,3728,3898,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	56505977	56509967	chr16:56505977-56509967	0	-	56505977	56505977	8553170	3	59,105,611,	0,142,3379,
#Partially deleted in new
chr16	56509956	56516131	chr16:56509956-56516131	0	-	56509956	56509971	8553170	5	78,63,126,228,69,	0,902,1202,4496,6106,
#Partially deleted in new
chr16	56509981	56519621	chr16:56509981-56519621	0	-	56509981	56509981	8553170	5	53,63,126,228,108,	0,877,1177,4471,9532,
#Partially deleted in new
chr16	56510003	56520056	chr16:56510003-56520056	0	-	56510003	56510003	8553170	5	31,63,152,228,100,	0,855,1129,4449,9953,
#Partially deleted in new
chr16	56565048	56568957	chr16:56565048-56568957	3	+	56565128	56568932	789624	3	111,66,117,	0,2702,3792,
#Partially deleted in new
chr16	56589073	56591075	chr16:56589073-56591075	1	+	56589119	56590949	789624	4	116,96,66,236,	0,452,796,1766,
#Partially deleted in new
chr16	56589073	56591078	chr16:56589073-56591078	1	+	56589119	56590949	789624	3	116,66,239,	0,796,1766,
#Partially deleted in new
chr16	56589367	56591088	chr16:56589367-56591088	3	+	56589590	56590949	0	3	254,66,249,	0,502,1472,
#Partially deleted in new
chr16	56589535	56591085	chr16:56589535-56591085	0	+	56589535	56589535	8553170	1	1550,	0,
#Partially deleted in new
chr16	56589539	56590366	chr16:56589539-56590366	1	+	56589590	56590117	789624	2	82,497,	0,330,
#Partially deleted in new
chr16	56589544	56591088	chr16:56589544-56591088	0	+	56589544	56589544	8553170	3	77,122,249,	0,269,1295,
#Partially deleted in new
chr16	56608198	56609497	chr16:56608198-56609497	3	+	56608655	56609354	0	3	485,66,235,	0,793,1064,
#Partially deleted in new
chr16	56608583	56609476	chr16:56608583-56609476	0	+	56608583	56608583	8553170	2	474,214,	0,679,
#Partially deleted in new
chr16	56608594	56609497	chr16:56608594-56609497	0	+	56608594	56608594	8553170	1	903,	0,
#Partially deleted in new
chr16	56608605	56609494	chr16:56608605-56609494	1	+	56608655	56609185	789624	2	78,503,	0,386,
#Partially deleted in new
chr16	56608689	56609497	chr16:56608689-56609497	0	+	56608689	56608689	8553170	3	115,66,235,	0,302,573,
#Partially deleted in new
chr16	56609500	56611375	chr16:56609500-56611375	3	-	56609500	56609500	8553170	2	384,60,	0,1815,
#Deleted in new
chr16	56617475	56618818	chr16:56617475-56618818	7	+	56617475	56617475	16724991	3	115,66,230,	0,703,1113,
#Deleted in new
chr16	56617562	56618228	chr16:56617562-56618228	5	+	56617562	56617562	16724991	2	28,50,	0,616,
#Deleted in new
chr16	56625474	56627112	chr16:56625474-56627112	3	+	56625851	56626971	789624	3	405,66,233,	0,991,1405,
#Deleted in new
chr16	56625780	56627112	chr16:56625780-56627112	1	+	56625851	56626971	789624	2	99,233,	0,1099,
#Deleted in new
chr16	56625797	56627112	chr16:56625797-56627112	1	+	56625851	56626821	789624	2	82,647,	0,668,
#Deleted in new
chr16	56632232	56633986	chr16:56632232-56633986	3	+	56632731	56633842	789624	3	527,66,236,	0,1107,1518,
#Deleted in new
chr16	56632706	56633518	chr16:56632706-56633518	0	+	56632731	56633518	789624	2	53,179,	0,633,
#Deleted in new
chr16	56635738	56637086	chr16:56635738-56637086	7	+	56635738	56635738	16724991	3	107,66,235,	0,700,1113,
#Deleted in new
chr16	56635762	56636996	chr16:56635762-56636996	4	+	56635762	56635762	16724991	2	742,145,	0,1089,
#Deleted in new
chr16	56635817	56636943	chr16:56635817-56636943	5	+	56635817	56635817	16724991	3	28,66,92,	0,621,1034,
#Deleted in new
chr16	56638665	56640087	chr16:56638665-56640087	3	+	56638738	56639950	789624	3	101,66,229,	0,598,1193,
#Deleted in new
chr16	56643704	56644786	chr16:56643704-56644786	7	+	56643704	56643704	16724991	3	48,66,77,	0,406,1005,
#Deleted in new
chr16	56643724	56644765	chr16:56643724-56644765	5	+	56643724	56643724	16724991	3	28,66,56,	0,386,985,
#Deleted in new
chr16	56648247	56649514	chr16:56648247-56649514	7	+	56648247	56648247	16724991	3	21,64,89,	0,581,1178,
#Partially deleted in new
chr16	56648880	56652636	chr16:56648880-56652636	3	+	56648880	56648880	8553170	3	124,54,66,	0,3047,3690,
#Deleted in new
chr16	56651898	56653204	chr16:56651898-56653204	3	+	56651953	56653065	789624	3	83,66,231,	0,672,1075,
#Deleted in new
chr16	56651925	56653204	chr16:56651925-56653204	1	+	56651953	56653094	789624	3	56,64,231,	0,645,1048,
#Deleted in new
chr16	56657693	56659303	chr16:56657693-56659303	3	+	56658058	56659164	789624	3	393,66,231,	0,981,1379,
#Deleted in new
chr16	56657730	56659303	chr16:56657730-56659303	0	+	56657730	56657730	8553170	1	1573,	0,
#Deleted in new
chr16	56658011	56659305	chr16:56658011-56659305	1	+	56658058	56658781	789624	3	75,108,233,	0,663,1061,
#Partially deleted in new
chr16	56659233	56660698	chr16:56659233-56660698	0	+	56659233	56659233	8553170	2	40,277,	0,1188,
#Deleted in new
chr16	56666730	56668065	chr16:56666730-56668065	3	-	56666878	56667993	789624	3	240,66,100,	0,581,1235,
#Deleted in new
chr16	56666734	56668065	chr16:56666734-56668065	1	-	56666878	56667993	789624	3	236,69,100,	0,577,1231,
#Deleted in new
chr16	56666734	56668034	chr16:56666734-56668034	1	-	56666878	56667993	789624	2	236,69,	0,1231,
#Deleted in new
chr16	56666805	56668021	chr16:56666805-56668021	1	-	56667198	56667993	789624	2	572,56,	0,1160,
#Deleted in new
chr16	56669813	56671129	chr16:56669813-56671129	3	+	56669884	56670989	789624	3	99,66,232,	0,692,1084,
#Deleted in new
chr16	56669839	56671129	chr16:56669839-56671129	1	+	56669884	56670735	789624	2	73,624,	0,666,
#Partially deleted in new
chr16	56676131	56677763	chr16:56676131-56677763	7	+	56676131	56676131	16724991	3	86,44,112,	0,939,1520,
#Partially deleted in new
chr16	56676189	56677742	chr16:56676189-56677742	5	+	56676189	56676189	16724991	3	33,58,91,	0,867,1462,
#Partially deleted in new
chr16	56682423	56684196	chr16:56682423-56684196	3	+	56682540	56684049	789624	3	145,66,239,	0,741,1534,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	56682469	56683603	chr16:56682469-56683603	1	+	56682540	56683277	789624	2	99,439,	0,695,
#Partially deleted in new
chr16	56682469	56687807	chr16:56682469-56687807	3	+	56682469	56682469	8553170	3	99,222,230,	0,695,5108,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	56682469	56684196	chr16:56682469-56684196	0	+	56682469	56682469	8553170	1	1727,	0,
#Partially deleted in new
chr16	56682480	56684196	chr16:56682480-56684196	0	+	56682540	56683277	789624	3	88,222,239,	0,684,1477,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	56686850	56688052	chr16:56686850-56688052	7	+	56686850	56686850	16724991	2	348,530,	0,672,
#Partially deleted in new
chr16	56708771	56729968	chr16:56708771-56729968	3	-	56708771	56708771	8553170	3	474,81,463,	0,1142,20734,
#Partially deleted in new
chr16	56709224	56729968	chr16:56709224-56729968	0	-	56709224	56709224	8553170	3	21,264,463,	0,689,20281,
#Partially deleted in new
chr16	56730104	56844769	chr16:56730104-56844769	3	+	56748247	56844609	0	22	107,193,118,63,129,75,90,140,133,158,166,94,192,127,73,45,117,119,118,84,129,271,	0,18129,28433,68371,75399,88559,91399,93602,98872,100423,101737,102190,103110,104023,104265,104629,106496,107503,108847,109416,111600,114394,
#Partially deleted in new
chr16	56730117	56832353	chr16:56730117-56832353	0	+	56748247	56832353	789624	8	94,33,14,140,133,158,166,59,	0,18116,91462,93589,98859,100410,101724,102177,
#Partially deleted in new
chr16	56730128	56805597	chr16:56730128-56805597	0	+	56748247	56805597	789624	6	83,38,193,118,63,94,	0,11651,18105,28409,68347,75375,
#Partially deleted in new
chr16	56730148	56823798	chr16:56730148-56823798	0	+	56805512	56823798	789624	7	63,118,63,129,75,90,92,	0,28389,68327,75355,88515,91355,93558,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	56740713	56805552	chr16:56740713-56805552	0	+	56748247	56805552	789624	5	160,193,118,63,49,	0,7520,17824,57762,64790,
#Partially deleted in new
chr16	56747910	56818709	chr16:56747910-56818709	0	+	56748247	56818709	789624	6	43,193,118,63,129,46,	0,323,10627,50565,57593,70753,
#Partially deleted in new
chr16	56748348	56805686	chr16:56748348-56805686	0	+	56748348	56805641	789624	4	78,118,63,183,	0,10189,50127,57155,
#Partially deleted in new
chr16	56781657	56844764	chr16:56781657-56844764	1	+	56805512	56844609	0	20	557,63,129,75,90,140,133,158,166,94,192,127,73,45,117,119,118,84,129,266,	0,16818,23846,37006,39846,42049,47319,48870,50184,50637,51557,52470,52712,53076,54943,55950,57294,57863,60047,62841,
#Partially deleted in new
chr16	56781828	56821542	chr16:56781828-56821542	0	+	56781828	56781828	8553170	4	386,63,75,39,	0,16647,36835,39675,
#Partially deleted in new
chr16	56781828	56805615	chr16:56781828-56805615	0	+	56781828	56781828	8553170	3	386,63,141,	0,16647,23646,
#Partially deleted in new
chr16	56782245	56829021	chr16:56782245-56829021	0	+	56805512	56829021	789624	7	62,63,129,75,90,140,45,	0,16230,23258,36418,39258,41461,46731,
#Partially deleted in new
chr16	56782249	56805632	chr16:56782249-56805632	0	+	56805512	56805632	789624	3	392,63,129,	0,16226,23254,
#Partially deleted in new
chr16	56783379	56805562	chr16:56783379-56805562	0	+	56805512	56805562	789624	3	193,63,59,	0,15096,22124,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr16	56783455	56850286	chr16:56783455-56850286	1	+	56805512	56844609	0	20	417,63,129,75,90,140,133,158,166,94,192,127,73,45,117,119,118,84,129,5788,	0,15020,22048,35208,38048,40251,45521,47072,48386,48839,49759,50672,50914,51278,53145,54152,55496,56065,58249,61043,
#Deleted in new
chr16	56831514	56833389	chr16:56831514-56833389	0	+	56831514	56831514	8553170	3	493,94,175,	0,780,1700,
#Partially deleted in new
chr16	56836624	56839216	chr16:56836624-56839216	0	+	56836624	56839093	789624	3	93,119,265,	0,983,2327,
#Partially deleted in new
chr16	56837624	56839935	chr16:56837624-56839935	0	+	56837624	56839721	789624	3	102,118,415,	0,1327,1896,
#Partially deleted in new
chr16	56839009	56844764	chr16:56839009-56844764	0	+	56839009	56844609	789624	3	60,84,266,	0,511,5489,
#Partially deleted in new
chr16	56839399	56844752	chr16:56839399-56844752	0	+	56839399	56839399	8553170	3	205,129,254,	0,2305,5099,
#Partially deleted in new
chr16	56841640	56844763	chr16:56841640-56844763	0	+	56841640	56841640	8553170	2	193,265,	0,2858,
#Deleted in new
chr16	56858517	56858601	chr16:56858517-56858601	3	+	56858517	56858517	5263520	1	84,	0,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr16	56865206	56915850	chr16:56865206-56915850	3	+	56865235	56913405	789624	26	311,147,76,96,140,111,112,131,85,155,108,124,102,156,100,112,141,107,83,78,102,112,87,136,68,2587,	0,1863,3090,4522,4889,5419,7144,7449,12870,13866,14335,14923,17189,18842,20058,21157,21746,22718,25067,26876,27746,29324,34323,37166,39188,48057,
#Partially deleted in new
chr16	56865206	56913405	chr16:56865206-56913405	1	+	56865235	56913405	789624	26	311,144,76,96,140,111,112,131,85,155,108,124,102,156,100,112,141,107,83,78,102,112,87,136,68,142,	0,1866,3090,4522,4889,5419,7144,7449,12870,13866,14335,14923,17189,18842,20058,21157,21746,22718,25067,26876,27746,29324,34323,37166,39188,48057,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr16	56865210	56914525	chr16:56865210-56914525	1	+	56865235	56913405	789624	26	307,144,76,96,140,111,112,131,85,155,108,124,102,156,100,112,141,107,83,51,102,112,87,136,68,1262,	0,1862,3086,4518,4885,5415,7140,7445,12866,13862,14331,14919,17185,18838,20054,21153,21742,22714,25063,26872,27742,29320,34319,37162,39184,48053,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr16	56865210	56914522	chr16:56865210-56914522	1	+	56865235	56913405	789624	26	307,147,76,96,140,111,112,131,85,155,108,124,102,156,100,112,141,107,83,51,102,112,87,136,68,1259,	0,1859,3086,4518,4885,5415,7140,7445,12866,13862,14331,14919,17185,18838,20054,21153,21742,22714,25063,26872,27742,29320,34319,37162,39184,48053,
#Partially deleted in new
chr16	56902221	56904852	chr16:56902221-56904852	0	+	56902221	56902221	8553170	2	287,458,	0,2173,
#Deleted in new
chr16	56904263	56904353	chr16:56904263-56904353	3	+	56904263	56904263	5263520	1	90,	0,
#Deleted in new
chr16	56906533	56906956	chr16:56906533-56906956	7	+	56906533	56906533	16724991	1	423,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	56907025	56913978	chr16:56907025-56913978	0	+	56907025	56907025	8553170	2	72,715,	0,6238,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	56932047	56944863	chr16:56932047-56944863	3	+	56932244	56943290	0	8	344,78,75,131,123,351,106,1738,	0,3187,3353,4639,7189,7847,10084,11078,
#Partially deleted in new
chr16	56932141	56935554	chr16:56932141-56935554	0	+	56932141	56932141	8553170	2	250,320,	0,3093,
#Partially deleted in new
chr16	56932146	56943881	chr16:56932146-56943881	1	+	56932244	56943290	0	8	245,78,72,131,123,351,106,756,	0,3088,3257,4540,7090,7748,9985,10979,
#Partially deleted in new
chr16	56932146	56943881	chr16:56932146-56943881	1	+	56932244	56943290	0	6	245,78,72,131,106,756,	0,3088,3257,4540,9985,10979,
#Partially deleted in new
chr16	56932146	56940047	chr16:56932146-56940047	0	+	56932244	56935256	789624	6	245,71,75,131,123,153,	0,3095,3254,4540,7090,7748,
#Partially deleted in new
chr16	56932146	56935648	chr16:56932146-56935648	0	+	56932146	56932146	8553170	3	245,78,248,	0,3088,3254,
#Partially deleted in new
chr16	56932146	56937413	chr16:56932146-56937413	0	+	56932146	56932146	8553170	4	245,78,75,727,	0,3088,3254,4540,
#Partially deleted in new
chr16	56932147	56943599	chr16:56932147-56943599	0	+	56932147	56932147	8553170	8	244,78,75,131,123,194,106,474,	0,3087,3253,4539,7089,7747,9984,10978,
#Partially deleted in new
chr16	56932159	56943886	chr16:56932159-56943886	1	+	56932244	56943290	0	7	232,78,131,123,351,106,761,	0,3075,4527,7077,7735,9972,10966,
#Partially deleted in new
chr16	56933183	56939992	chr16:56933183-56939992	0	+	56933294	56939992	789624	5	132,78,131,123,98,	0,2051,3503,6053,6711,
#Partially deleted in new
chr16	56933207	56939946	chr16:56933207-56939946	0	+	56933294	56939946	789624	6	108,78,75,131,123,52,	0,2027,2193,3479,6029,6687,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	56934964	56935563	chr16:56934964-56935563	0	+	56934964	56934964	8553170	2	348,163,	0,436,
#Partially deleted in new
chr16	56935377	56942202	chr16:56935377-56942202	0	+	56935377	56935377	8553170	5	98,131,123,351,71,	0,1309,3859,4517,6754,
#Partially deleted in new
chr16	56935401	56943548	chr16:56935401-56943548	0	+	56935401	56943126	789624	4	74,131,123,423,	0,1285,3835,7724,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	56935950	56943877	chr16:56935950-56943877	0	+	56935950	56935950	8553170	5	867,123,351,106,752,	0,3286,3944,6181,7175,
#Partially deleted in new
chr16	56936723	56943557	chr16:56936723-56943557	0	+	56936723	56943393	789624	4	94,351,106,293,	0,3171,5408,6541,
#Deleted in new
chr16	56939143	56940113	chr16:56939143-56940113	0	+	56939143	56939143	8553170	2	216,219,	0,751,
#Partially deleted in new
chr16	56939248	56943297	chr16:56939248-56943297	0	+	56939248	56943290	789624	4	111,69,106,172,	0,928,2883,3877,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	56940277	56941342	chr16:56940277-56941342	3	+	56940277	56940277	8553170	2	124,477,	0,588,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	56941027	56941726	chr16:56941027-56941726	3	+	56941027	56941027	8553170	1	699,	0,
#Partially deleted in new
chr16	56942010	56943407	chr16:56942010-56943407	0	+	56942010	56942010	8553170	2	227,282,	0,1115,
#Partially deleted in new
chr16	56961849	56983845	chr16:56961849-56983845	3	+	56961979	56983666	0	16	248,115,135,71,88,70,61,92,180,51,165,68,34,73,86,254,	0,1160,7536,7761,8064,9183,9471,10142,11481,13251,16241,19308,19797,20315,21476,21742,
#Partially deleted in new
chr16	56961922	56983844	chr16:56961922-56983844	1	+	56961979	56983666	0	15	175,115,135,71,88,70,61,92,51,165,68,34,73,86,253,	0,1087,7463,7688,7991,9110,9398,10069,13178,16168,19235,19724,20242,21403,21669,
#Partially deleted in new
chr16	56961981	56973368	chr16:56961981-56973368	0	+	56961981	56961981	8553170	9	116,115,135,71,88,70,165,92,38,	0,1028,7404,7629,7932,9051,9235,10010,11349,
#Partially deleted in new
chr16	56962106	56983845	chr16:56962106-56983845	1	+	56963086	56983666	789624	16	190,115,135,71,88,70,61,92,180,51,165,68,34,73,86,254,	0,903,7279,7504,7807,8926,9214,9885,11224,12994,15984,19051,19540,20058,21219,21485,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	56976711	56983392	chr16:56976711-56983392	0	+	56976711	56976711	8553170	5	1544,68,34,73,67,	0,4446,4935,5453,6614,
#Partially deleted in new
chr16	56989484	57048354	chr16:56989484-57048354	0	+	57020712	57028159	789624	25	133,115,307,60,69,1651,132,84,84,90,60,66,84,435,84,90,69,69,90,84,90,45,90,84,612,	0,27589,31216,32771,34300,35883,38587,38817,40288,40510,41919,44119,44683,45027,46615,47710,50296,51165,52000,52497,54030,55963,57067,58060,58258,
#Partially deleted in new
chr16	56989497	57083524	chr16:56989497-57083524	3	+	57020712	57082528	789624	49	98,115,307,60,69,1651,84,84,84,90,60,66,84,84,90,69,69,90,84,90,45,90,84,84,90,63,87,84,90,66,84,84,87,81,84,93,84,84,84,84,84,84,78,84,72,84,84,84,1108,	0,27576,31203,32758,34287,35870,38574,38804,40275,40497,41906,44106,44670,46602,47697,50283,51152,51987,52484,54017,55950,57054,58047,62040,65253,65534,65935,68567,69474,69969,71950,72120,75714,77036,77889,78238,80338,81037,85102,87321,87798,88221,88445,89552,89723,90048,91600,92029,92919,
#Partially deleted in new
chr16	56989562	57021112	chr16:56989562-57021112	0	+	56989562	56989562	8553170	3	33,115,412,	0,27511,31138,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	56989562	56992444	chr16:56989562-56992444	0	+	56989562	56989562	8553170	2	33,530,	0,2352,
#Deleted in new
chr16	56989593	56991126	chr16:56989593-56991126	0	+	56989593	56989593	8553170	2	24,503,	0,1030,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	57003852	57020936	chr16:57003852-57020936	0	+	57020712	57020936	789624	3	243,115,236,	0,13221,16848,
#Partially deleted in new
chr16	57004485	57020769	chr16:57004485-57020769	0	+	57020712	57020769	789624	3	98,115,69,	0,12588,16215,
#Deleted in new
chr16	57013070	57014100	chr16:57013070-57014100	7	-	57013070	57013070	16724991	1	1030,	0,
#Partially deleted in new
chr16	57017073	57083524	chr16:57017073-57083524	1	+	57020712	57082528	789624	48	115,307,60,69,1651,84,84,84,90,60,66,84,84,90,69,69,90,84,90,45,90,84,84,90,63,87,84,90,66,84,84,87,81,84,93,84,84,84,84,84,84,78,84,72,84,84,84,1108,	0,3627,5182,6711,8294,10998,11228,12699,12921,14330,16530,17094,19026,20121,22707,23576,24411,24908,26441,28374,29478,30471,34464,37677,37958,38359,40991,41898,42393,44374,44544,48138,49460,50313,50662,52762,53461,57526,59745,60222,60645,60869,61976,62147,62472,64024,64453,65343,
#Partially deleted in new
chr16	57020712	57083519	chr16:57020712-57083519	1	+	57020712	57082528	789624	46	295,60,69,1651,84,84,84,90,60,66,84,84,90,69,69,90,84,90,45,90,84,84,90,63,84,90,66,84,84,87,81,84,93,84,84,84,84,84,84,78,84,72,84,84,84,1103,	0,1543,3072,4655,7359,7589,9060,9282,10691,12891,13455,15387,16482,19068,19937,20772,21269,22802,24735,25839,26832,30825,34038,34319,37352,38259,38754,40735,40905,44499,45821,46674,47023,49123,49822,53887,56106,56583,57006,57230,58337,58508,58833,60385,60814,61704,
#Partially deleted in new
chr16	57025686	57062003	chr16:57025686-57062003	0	+	57025686	57061992	789624	28	1332,84,84,84,90,60,66,84,84,90,69,69,90,84,90,45,90,84,84,90,63,84,84,90,66,84,84,144,	0,2385,2615,4086,4308,5717,7917,8481,10413,11508,14094,14963,15798,16295,17828,19761,20865,21858,25851,29064,29345,29749,32378,33285,33780,35761,35931,36173,
#Partially deleted in new
chr16	57025761	57083519	chr16:57025761-57083519	0	+	57025761	57059478	789624	44	1257,84,84,84,90,60,66,84,84,90,69,69,90,84,90,45,90,84,84,90,63,87,84,90,124,84,84,87,81,84,93,84,84,84,84,84,84,78,84,72,84,84,84,1103,	0,2310,2540,4011,4233,5642,7842,8406,10338,11433,14019,14888,15723,16220,17753,19686,20790,21783,25776,28989,29270,29671,32303,33210,33647,35686,35856,39450,40772,41625,41974,44074,44773,48838,51057,51534,51957,52181,53288,53459,53784,55336,55765,56655,
#Partially deleted in new
chr16	57026422	57061933	chr16:57026422-57061933	0	+	57026422	57061933	789624	27	596,84,84,84,90,60,66,84,84,90,69,69,90,84,90,45,84,84,90,63,84,84,90,66,84,84,74,	0,1649,1879,3350,3572,4981,7181,7745,9677,10772,13358,14227,15062,15559,17092,19025,21122,25115,28328,28609,29013,31642,32549,33044,35025,35195,35437,
#Partially deleted in new
chr16	57026638	57030084	chr16:57026638-57030084	0	+	57026638	57026638	8553170	4	380,314,84,90,	0,1433,3134,3356,
#Partially deleted in new
chr16	57026878	57061966	chr16:57026878-57061966	0	+	57026878	57061966	789624	23	140,84,90,60,66,84,84,90,69,69,90,84,90,45,84,84,90,63,87,66,84,84,107,	0,1193,3116,4525,6725,7289,9221,10316,12902,13771,14606,15103,16636,18569,20666,24659,27872,28153,28554,32588,34569,34739,34981,
#Partially deleted in new
chr16	57034171	57083531	chr16:57034171-57083531	0	+	57034171	57070543	789624	37	80,84,90,69,69,90,84,90,45,90,84,84,90,63,87,84,90,66,84,84,87,81,84,93,148,84,84,84,84,84,78,84,72,84,84,84,1115,	0,1928,3023,5609,6478,7313,7810,9343,11276,12380,13373,17366,20579,20860,21261,23893,24800,25295,27276,27446,31040,32362,33215,33564,35600,36363,40428,42647,43124,43547,43771,44878,45049,45374,46926,47355,48245,
#Partially deleted in new
chr16	57040687	57083524	chr16:57040687-57083524	0	+	57040687	57062162	789624	33	31,90,84,90,45,90,84,84,90,63,84,90,66,84,84,15,87,81,84,93,84,84,84,84,84,84,78,84,72,84,84,84,1108,	0,797,1294,2827,4760,5864,6857,10850,14063,14344,17377,18284,18779,20760,20930,21471,24524,25846,26699,27048,29148,29847,33912,36131,36608,37031,37255,38362,38533,38858,40410,40839,41729,
#Partially deleted in new
chr16	57041320	57062744	chr16:57041320-57062744	0	+	57041320	57041320	8553170	15	254,90,45,90,84,84,90,63,84,84,90,66,84,84,394,	0,2194,4127,5231,6224,10217,13430,13711,14115,16744,17651,18146,20127,20297,21030,
#Partially deleted in new
chr16	57041407	57061519	chr16:57041407-57061519	0	+	57041407	57041407	8553170	12	167,84,90,45,84,84,90,63,84,90,66,72,	0,574,2107,4040,6137,10130,13343,13624,14028,17564,18059,20040,
#Partially deleted in new
chr16	57041487	57043808	chr16:57041487-57043808	0	+	57041487	57041487	8553170	3	87,84,294,	0,494,2027,
#Partially deleted in new
chr16	57043580	57083524	chr16:57043580-57083524	0	+	57043580	57062162	789624	31	24,45,90,84,84,90,63,84,84,90,66,84,84,15,87,81,84,93,84,84,84,84,84,84,78,84,72,84,84,84,1108,	0,1867,2971,3964,7957,11170,11451,11855,14484,15391,15886,17867,18037,18578,21631,22953,23806,24155,26255,26954,31019,33238,33715,34138,34362,35469,35640,35965,37517,37946,38836,
#Partially deleted in new
chr16	57045296	57055036	chr16:57045296-57055036	0	+	57045296	57045296	8553170	6	196,90,84,84,90,5,	0,1255,2248,6241,9454,9735,
#Partially deleted in new
chr16	57052504	57058497	chr16:57052504-57058497	3	-	57052504	57052504	8553170	2	593,79,	0,5914,
#Partially deleted in new
chr16	57058064	57062003	chr16:57058064-57062003	0	+	57058064	57061925	789624	6	84,90,66,84,84,142,	0,907,1402,3383,3553,3797,
#Partially deleted in new
chr16	57059182	57062004	chr16:57059182-57062004	0	+	57059182	57059182	8553170	2	350,557,	0,2265,
#Partially deleted in new
chr16	57059199	57061933	chr16:57059199-57061933	0	+	57059199	57059199	8553170	4	333,84,84,74,	0,2248,2418,2660,
#Partially deleted in new
chr16	57074170	57076851	chr16:57074170-57076851	0	+	57074170	57074170	8553170	2	513,33,	0,2648,
#Partially deleted in new
chr16	57080818	57083520	chr16:57080818-57083520	0	+	57080818	57080818	8553170	2	792,1104,	0,1598,
#Partially deleted in new
chr16	57080998	57082633	chr16:57080998-57082633	0	+	57080998	57080998	8553170	3	183,84,217,	0,528,1418,
#Partially deleted in new
chr16	57091212	57092303	chr16:57091212-57092303	3	-	57091212	57091212	8553170	2	95,377,	0,714,
#Partially deleted in new
chr16	57092536	57148367	chr16:57092536-57148367	3	+	57110742	57147658	789624	16	254,215,180,75,72,84,90,99,87,60,134,55,52,134,237,817,	0,18171,20751,22939,24959,26658,27024,28556,29137,30877,33323,35312,42238,44612,53548,55014,
#Partially deleted in new
chr16	57092606	57147966	chr16:57092606-57147966	1	+	57110742	57147658	789624	17	184,142,215,180,75,72,84,90,99,87,60,134,55,52,134,237,416,	0,1343,18101,20681,22869,24889,26588,26954,28486,29067,30807,33253,35242,42168,44542,53478,54944,
#Partially deleted in new
chr16	57106050	57113352	chr16:57106050-57113352	0	+	57110742	57113352	789624	3	124,215,65,	0,4657,7237,
#Partially deleted in new
chr16	57110550	57147795	chr16:57110550-57147795	1	+	57110742	57147658	789624	15	372,180,75,72,84,90,99,87,60,134,55,52,134,237,245,	0,2737,4925,6945,8644,9010,10542,11123,12863,15309,17298,24224,26598,35534,37000,
#Partially deleted in new
chr16	57112841	57119639	chr16:57112841-57119639	0	+	57113413	57119639	789624	5	626,75,72,84,79,	0,2634,4654,6353,6719,
#Partially deleted in new
chr16	57119198	57137248	chr16:57119198-57137248	0	+	57119198	57137248	789624	10	80,90,99,87,60,87,134,55,52,100,	0,362,1894,2475,4215,6078,6661,8650,15576,17950,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	57123305	57147964	chr16:57123305-57147964	0	+	57123305	57123305	8553170	5	2688,55,52,237,414,	0,4543,11469,22779,24245,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	57124247	57147964	chr16:57124247-57147964	0	+	57124247	57124247	8553170	4	222,134,55,1880,	0,1612,3601,21837,
#Partially deleted in new
chr16	57129051	57147966	chr16:57129051-57147966	0	+	57129051	57129051	8553170	5	99,52,134,237,416,	0,5723,8097,17033,18499,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	57140895	57144586	chr16:57140895-57144586	3	-	57140895	57140895	8553170	1	3691,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	57142651	57144936	chr16:57142651-57144936	3	+	57142651	57142651	8553170	1	2285,	0,
#Deleted in new
chr16	57145639	57147769	chr16:57145639-57147769	0	+	57145639	57145639	8553170	2	682,219,	0,1911,
#Partially deleted in new
chr16	57152465	57186064	chr16:57152465-57186064	3	-	57154289	57173854	789624	7	2042,65,134,122,99,142,244,	0,11535,14627,19785,20310,21262,33355,
#Partially deleted in new
chr16	57153735	57175690	chr16:57153735-57175690	0	-	57167238	57173854	789624	7	772,65,158,8,99,142,152,	0,10265,13357,18629,19040,19992,21803,
#Partially deleted in new
chr16	57153736	57173881	chr16:57153736-57173881	1	-	57154289	57173854	789624	7	70,373,65,134,122,99,154,	0,398,10264,13356,18514,19039,19991,
#Partially deleted in new
chr16	57154134	57173788	chr16:57154134-57173788	0	-	57154289	57173788	789624	4	373,65,119,61,	0,9866,12958,19593,
#Partially deleted in new
chr16	57154142	57186032	chr16:57154142-57186032	1	-	57154289	57172367	789624	7	365,65,134,122,99,69,212,	0,9858,12950,18108,18633,19585,31678,
#Partially deleted in new
chr16	57154144	57178557	chr16:57154144-57178557	1	-	57154289	57173854	789624	7	363,65,134,122,99,142,56,	0,9856,12948,18106,18631,19583,24357,
#Partially deleted in new
chr16	57154199	57186040	chr16:57154199-57186040	1	-	57154289	57173854	789624	7	308,65,134,122,99,142,216,	0,9801,12893,18051,18576,19528,31625,
#Partially deleted in new
chr16	57154278	57186032	chr16:57154278-57186032	1	-	57154289	57173854	789624	8	229,65,134,122,99,142,52,212,	0,9722,12814,17972,18497,19449,21260,31542,
#Partially deleted in new
chr16	57164051	57186116	chr16:57164051-57186116	0	-	57164051	57173854	789624	6	14,134,122,99,142,86,	0,3041,8199,8724,9676,21979,
#Partially deleted in new
chr16	57167130	57186039	chr16:57167130-57186039	0	-	57167130	57173854	789624	6	96,122,99,142,351,219,	0,5120,5645,6597,11371,18690,
#Partially deleted in new
chr16	57167152	57185817	chr16:57167152-57185817	0	-	57167152	57173854	789624	5	74,122,99,142,82,	0,5098,5623,6575,18583,
#Partially deleted in new
chr16	57167184	57186022	chr16:57167184-57186022	0	-	57167184	57173854	789624	6	42,122,99,142,69,202,	0,5066,5591,6543,7435,18636,
#Partially deleted in new
chr16	57172278	57185817	chr16:57172278-57185817	0	-	57172278	57173854	789624	4	94,99,142,273,	0,497,1449,13266,
#Partially deleted in new
chr16	57172333	57186031	chr16:57172333-57186031	0	-	57172333	57173854	789624	5	39,99,142,47,211,	0,442,1394,6472,13487,
#Partially deleted in new
chr16	57172808	57186064	chr16:57172808-57186064	0	-	57172808	57173854	789624	4	66,142,351,34,	0,919,5693,13222,
#Partially deleted in new
chr16	57173772	57186039	chr16:57173772-57186039	0	-	57173772	57173854	789624	4	97,162,143,219,	0,1766,4937,12048,
#Partially deleted in new
chr16	57173780	57174886	chr16:57173780-57174886	0	-	57173780	57173854	789624	2	89,267,	0,839,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	57177348	57181390	chr16:57177348-57181390	3	+	57177348	57177348	8553170	2	49,3475,	0,567,
#Partially deleted in new
chr16	57178513	57185962	chr16:57178513-57185962	0	-	57178513	57178513	8553170	2	339,138,	0,7311,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	57178525	57181790	chr16:57178525-57181790	0	-	57178525	57178525	8553170	2	327,237,	0,3028,
#Partially deleted in new
chr16	57186136	57209109	chr16:57186136-57209109	0	+	57204658	57209109	789624	4	99,505,53,35,	0,18367,21921,22938,
#Partially deleted in new
chr16	57186280	57209110	chr16:57186280-57209110	0	+	57204658	57209110	789624	4	149,505,53,36,	0,18223,21777,22794,
#Partially deleted in new
chr16	57186283	57209179	chr16:57186283-57209179	0	+	57208079	57209179	789624	5	168,129,93,53,105,	0,638,21309,21774,22791,
#Partially deleted in new
chr16	57186290	57240475	chr16:57186290-57240475	3	+	57204658	57238975	789624	15	161,505,53,113,127,59,67,132,116,144,112,103,153,105,1597,	0,18213,21767,22784,26681,27597,29816,30613,34441,34981,41051,44420,44876,48833,52588,
#Partially deleted in new
chr16	57186306	57208070	chr16:57186306-57208070	0	+	57204658	57208070	789624	3	136,505,13,	0,18197,21751,
#Partially deleted in new
chr16	57186310	57205269	chr16:57186310-57205269	0	+	57186310	57186310	8553170	2	475,766,	0,18193,
#Partially deleted in new
chr16	57186332	57239957	chr16:57186332-57239957	1	+	57204658	57238975	789624	15	718,505,53,113,127,59,67,132,116,144,112,103,153,105,1079,	0,18171,21725,22742,26639,27555,29774,30571,34399,34939,41009,44378,44834,48791,52546,
#Partially deleted in new
chr16	57204596	57209095	chr16:57204596-57209095	0	+	57204658	57209095	789624	4	412,93,53,21,	0,2996,3461,4478,
#Partially deleted in new
chr16	57208049	57220824	chr16:57208049-57220824	0	+	57208049	57208049	8553170	6	61,113,127,59,132,93,	0,1025,4922,5838,8854,12682,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	57213002	57216502	chr16:57213002-57216502	0	+	57213002	57213002	8553170	3	96,59,396,	0,885,3104,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	57219671	57240446	chr16:57219671-57240446	0	+	57219671	57219671	8553170	7	1176,144,112,103,153,105,1568,	0,1600,7670,11039,11495,15452,19207,
#Partially deleted in new
chr16	57224421	57239046	chr16:57224421-57239046	0	+	57224421	57224421	8553170	6	58,112,103,153,105,168,	0,2920,6289,6745,10702,14457,
#Partially deleted in new
chr16	57245097	57253635	chr16:57245097-57253635	3	+	57245367	57252267	0	6	308,62,107,86,97,1470,	0,982,3439,4669,5313,7068,
#Partially deleted in new
chr16	57245258	57246141	chr16:57245258-57246141	0	+	57245258	57245258	8553170	2	147,87,	0,796,
#Partially deleted in new
chr16	57245349	57252424	chr16:57245349-57252424	1	+	57245367	57252267	789624	5	56,62,73,97,259,	0,730,4430,5061,6816,
#Partially deleted in new
chr16	57245375	57253275	chr16:57245375-57253275	0	+	57245375	57252373	789624	6	30,62,107,86,97,1034,	0,704,3161,4391,5035,6866,
#Partially deleted in new
chr16	57245831	57246396	chr16:57245831-57246396	3	-	57245831	57245831	8553170	1	565,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	57247349	57248492	chr16:57247349-57248492	3	+	57247349	57247349	8553170	2	108,250,	0,893,
#Partially deleted in new
chr16	57248546	57252752	chr16:57248546-57252752	0	-	57248546	57248546	8553170	2	80,320,	0,3886,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	57249038	57284661	chr16:57249038-57284661	1	-	57256009	57284540	789624	4	7025,123,174,256,	0,9423,12858,35367,
#Partially deleted in new
chr16	57256096	57284687	chr16:57256096-57284687	3	-	57256912	57284540	789624	4	933,123,174,282,	0,2365,5800,28309,
#Partially deleted in new
chr16	57256754	57284672	chr16:57256754-57284672	1	-	57256912	57284540	789624	3	275,123,267,	0,1707,27651,
#Partially deleted in new
chr16	57256980	57263371	chr16:57256980-57263371	0	-	57256980	57261998	789624	4	49,123,174,103,	0,1481,4916,6288,
#Partially deleted in new
chr16	57321351	57322117	chr16:57321351-57322117	7	+	57321351	57321351	16724991	2	276,179,	0,587,
#Partially deleted in new
chr16	57332378	57332599	chr16:57332378-57332599	7	-	57332378	57332378	16724991	1	221,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	57358771	57366190	chr16:57358771-57366190	3	+	57358816	57363588	789624	3	118,124,2687,	0,1665,4732,
#Partially deleted in new
chr16	57372457	57385048	chr16:57372457-57385048	3	+	57372568	57383032	0	3	181,121,3019,	0,7176,9572,
#Partially deleted in new
chr16	57372476	57385041	chr16:57372476-57385041	1	+	57372568	57383032	789624	3	162,139,3012,	0,7139,9553,
#Partially deleted in new
chr16	57372524	57382478	chr16:57372524-57382478	1	+	57372568	57382127	789624	2	114,449,	0,9505,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	57376971	57385042	chr16:57376971-57385042	1	+	57379677	57383032	789624	2	2783,3013,	0,5058,
#Partially deleted in new
chr16	57404766	57416062	chr16:57404766-57416062	3	+	57413932	57415861	0	4	70,129,118,298,	0,9107,10314,10998,
#Partially deleted in new
chr16	57413868	57416062	chr16:57413868-57416062	1	+	57413932	57415861	0	3	134,118,298,	0,1212,1896,
#Partially deleted in new
chr16	57428168	57447528	chr16:57428168-57447528	3	-	57429169	57440928	0	9	1112,82,116,74,169,77,153,212,187,	0,2089,2982,4318,5875,8487,11013,12603,19173,
#Partially deleted in new
chr16	57428186	57447419	chr16:57428186-57447419	1	-	57429169	57440928	0	9	1094,82,116,74,169,77,114,212,78,	0,2071,2964,4300,5857,8469,10995,12585,19155,
#Partially deleted in new
chr16	57428217	57447406	chr16:57428217-57447406	1	-	57429191	57440928	789624	7	1063,82,74,169,149,212,65,	0,2040,4269,5826,10968,12554,19124,
#Partially deleted in new
chr16	57428553	57447406	chr16:57428553-57447406	1	-	57429191	57440928	789624	8	727,82,74,169,77,153,212,65,	0,1704,3933,5490,8102,10628,12218,18788,
#Partially deleted in new
chr16	57428937	57447368	chr16:57428937-57447368	1	-	57429191	57440928	789624	8	343,82,74,169,77,153,212,27,	0,1320,3549,5106,7718,10244,11834,18404,
#Partially deleted in new
chr16	57429061	57440975	chr16:57429061-57440975	1	-	57429169	57440928	789624	6	219,74,169,77,153,204,	0,3425,4982,7594,10120,11710,
#Partially deleted in new
chr16	57429098	57440986	chr16:57429098-57440986	0	-	57431255	57440928	789624	7	182,82,116,169,77,153,215,	0,1159,2052,4945,7557,10083,11673,
#Partially deleted in new
chr16	57429176	57430646	chr16:57429176-57430646	0	-	57429176	57429176	8553170	2	104,389,	0,1081,
#Partially deleted in new
chr16	57430257	57447366	chr16:57430257-57447366	0	-	57430257	57432504	789624	5	82,116,74,31,25,	0,893,2229,10695,17084,
#Partially deleted in new
chr16	57430327	57447420	chr16:57430327-57447420	0	-	57430327	57432504	789624	7	12,116,74,169,77,114,79,	0,823,2159,3716,6328,8854,17014,
#Partially deleted in new
chr16	57431195	57440933	chr16:57431195-57440933	0	-	57431195	57431195	8553170	6	275,74,169,77,153,162,	0,1291,2848,5460,7986,9576,
#Partially deleted in new
chr16	57431316	57447377	chr16:57431316-57447377	0	-	57431316	57431316	8553170	7	154,74,169,77,153,188,36,	0,1170,2727,5339,7865,9455,16025,
#Partially deleted in new
chr16	57433647	57439213	chr16:57433647-57439213	0	-	57433647	57433647	8553170	2	565,32,	0,5534,
#Partially deleted in new
chr16	57433909	57441403	chr16:57433909-57441403	0	-	57433909	57433909	8553170	4	303,77,153,632,	0,2746,5272,6862,
#Partially deleted in new
chr16	57436655	57447377	chr16:57436655-57447377	0	-	57436655	57440928	789624	4	77,153,239,36,	0,2526,4116,10686,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	57447424	57454304	chr16:57447424-57454304	0	+	57447424	57447424	8553170	3	154,169,1504,	0,3615,5376,
#Partially deleted in new
chr16	57447436	57461275	chr16:57447436-57461275	3	+	57447505	57460624	0	9	142,169,136,143,85,105,156,54,687,	0,3603,5364,9067,9494,10809,12128,12614,13152,
#Partially deleted in new
chr16	57447440	57459597	chr16:57447440-57459597	0	+	57447505	57459597	789624	5	138,169,136,105,33,	0,3599,5360,10805,12124,
#Partially deleted in new
chr16	57447481	57457140	chr16:57447481-57457140	0	+	57447481	57447481	8553170	4	97,169,136,637,	0,3558,5319,9022,
#Partially deleted in new
chr16	57447481	57460082	chr16:57447481-57460082	0	+	57447505	57460082	789624	8	97,181,136,143,85,105,156,32,	0,3546,5319,9022,9449,10764,12083,12569,
#Partially deleted in new
chr16	57447481	57457412	chr16:57447481-57457412	0	+	57447481	57447481	8553170	5	97,169,136,143,482,	0,3558,5319,9022,9449,
#Partially deleted in new
chr16	57447486	57460094	chr16:57447486-57460094	0	+	57447505	57458291	789624	7	92,169,136,143,105,156,44,	0,3553,5314,9017,10759,12078,12564,
#Partially deleted in new
chr16	57447493	57461242	chr16:57447493-57461242	1	+	57447505	57460624	789624	8	85,169,136,123,105,156,54,654,	0,3546,5307,9010,10752,12071,12557,13095,
#Partially deleted in new
chr16	57447496	57460873	chr16:57447496-57460873	1	+	57447505	57460624	789624	6	82,169,136,156,54,285,	0,3543,5304,12068,12554,13092,
#Partially deleted in new
chr16	57447502	57457402	chr16:57447502-57457402	0	+	57447502	57447502	8553170	5	76,169,136,123,472,	0,3537,5298,9001,9428,
#Partially deleted in new
chr16	57447559	57461267	chr16:57447559-57461267	0	+	57447559	57461177	789624	4	19,169,115,96,	0,3480,5241,13612,
#Partially deleted in new
chr16	57447728	57458316	chr16:57447728-57458316	0	+	57456533	57458316	789624	6	109,169,136,143,85,71,	0,3311,5072,8775,9202,10517,
#Partially deleted in new
chr16	57450784	57452836	chr16:57450784-57452836	0	+	57450784	57450784	8553170	2	424,36,	0,2016,
#Partially deleted in new
chr16	57451036	57456747	chr16:57451036-57456747	0	+	57451036	57451036	8553170	3	172,146,244,	0,1764,5467,
#Deleted in new
chr16	57456402	57457389	chr16:57456402-57457389	0	+	57456402	57456402	8553170	2	244,459,	0,528,
#Deleted in new
chr16	57458124	57461270	chr16:57458124-57461270	0	+	57458124	57458124	8553170	4	226,156,54,682,	0,1440,1926,2464,
#Deleted in new
chr16	57461054	57462737	chr16:57461054-57462737	3	+	57461054	57461054	8553170	2	117,181,	0,1502,
#Partially deleted in new
chr16	57462386	57472010	chr16:57462386-57472010	3	+	57462724	57471119	0	9	424,50,69,53,129,52,169,75,1036,	0,642,3566,3788,6778,7323,7574,7893,8588,
#Partially deleted in new
chr16	57462659	57469903	chr16:57462659-57469903	0	+	57462659	57462659	8553170	5	151,50,69,53,739,	0,369,3293,3515,6505,
#Partially deleted in new
chr16	57462666	57470269	chr16:57462666-57470269	0	+	57462666	57462666	8553170	7	144,50,69,53,129,52,309,	0,362,3286,3508,6498,7043,7294,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	57462668	57469198	chr16:57462668-57469198	0	+	57462724	57463660	789624	6	142,50,400,69,53,34,	0,360,987,3284,3506,6496,
#Partially deleted in new
chr16	57462673	57470271	chr16:57462673-57470271	0	+	57462673	57462673	8553170	8	137,50,69,53,129,52,169,61,	0,355,3279,3501,6491,7036,7287,7537,
#Partially deleted in new
chr16	57462675	57470408	chr16:57462675-57470408	0	+	57462675	57462675	8553170	6	135,50,69,53,129,699,	0,353,3277,3499,6489,7034,
#Deleted in new
chr16	57462776	57463512	chr16:57462776-57463512	0	+	57462776	57462776	8553170	2	34,484,	0,252,
#Partially deleted in new
chr16	57465722	57469270	chr16:57465722-57469270	0	+	57465722	57465722	8553170	3	299,53,106,	0,452,3442,
#Partially deleted in new
chr16	57471921	57479805	chr16:57471921-57479805	1	-	57473376	57479507	789624	7	1815,139,190,120,115,108,364,	0,1979,2871,3178,3584,3928,7520,
#Partially deleted in new
chr16	57471957	57486495	chr16:57471957-57486495	3	-	57473376	57479507	789624	9	1538,124,139,190,120,115,108,247,191,	0,1655,1943,2835,3142,3548,3892,7484,14347,
#Partially deleted in new
chr16	57472876	57479874	chr16:57472876-57479874	1	-	57473376	57479507	789624	8	619,124,139,190,120,115,108,433,	0,736,1024,1916,2223,2629,2973,6565,
#Partially deleted in new
chr16	57473900	57484098	chr16:57473900-57484098	0	-	57473900	57479507	789624	7	139,190,120,115,108,247,141,	0,892,1199,1605,1949,5541,10057,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	57474711	57479756	chr16:57474711-57479756	0	-	57475213	57479507	789624	4	271,120,108,315,	0,388,1138,4730,
#Deleted in new
chr16	57474889	57479794	chr16:57474889-57479794	0	-	57474889	57474889	8553170	6	93,120,115,108,119,353,	0,210,616,960,3654,4552,
#Deleted in new
chr16	57475142	57479899	chr16:57475142-57479899	0	-	57475142	57479507	789624	5	77,115,108,247,39,	0,363,707,4299,4718,
#Deleted in new
chr16	57475160	57479914	chr16:57475160-57479914	0	-	57475160	57479507	789624	5	59,115,108,244,54,	0,345,689,4281,4700,
#Deleted in new
chr16	57475161	57481853	chr16:57475161-57481853	0	-	57475161	57479507	789624	5	58,115,108,247,392,	0,344,688,4280,6300,
#Deleted in new
chr16	57475168	57479872	chr16:57475168-57479872	0	-	57475168	57479507	789624	5	51,115,108,244,28,	0,337,681,4273,4676,
#Deleted in new
chr16	57475168	57479872	chr16:57475168-57479872	0	-	57475168	57479507	789624	5	51,115,108,247,28,	0,337,681,4273,4676,
#Partially deleted in new
chr16	57475169	57487139	chr16:57475169-57487139	0	-	57475169	57479507	789624	5	50,115,108,247,44,	0,336,680,4272,11926,
#Deleted in new
chr16	57475198	57480417	chr16:57475198-57480417	0	-	57475198	57479507	789624	5	21,115,108,247,88,	0,307,651,4243,5131,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	57475208	57487322	chr16:57475208-57487322	0	-	57475208	57479507	789624	5	11,115,108,247,77,	0,297,641,4233,12037,
#Deleted in new
chr16	57475513	57476310	chr16:57475513-57476310	0	-	57475513	57475513	8553170	2	107,461,	0,336,
#Partially deleted in new
chr16	57475558	57484294	chr16:57475558-57484294	0	-	57475558	57479507	789624	4	62,108,244,337,	0,291,3883,8399,
#Deleted in new
chr16	57475563	57480377	chr16:57475563-57480377	0	-	57475563	57479507	789624	4	57,108,247,83,	0,286,3878,4731,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	57475862	57487327	chr16:57475862-57487327	0	-	57475862	57479507	789624	3	95,247,197,	0,3579,11268,
#Partially deleted in new
chr16	57512177	57536599	chr16:57512177-57536599	3	-	57512740	57529177	789624	9	693,104,171,210,117,109,227,732,100,	0,3163,4115,5890,6447,8890,13723,16415,24322,
#Partially deleted in new
chr16	57512386	57516582	chr16:57512386-57516582	0	-	57512386	57512386	8553170	3	484,104,290,	0,2954,3906,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	57542420	57577189	chr16:57542420-57577189	3	+	57562093	57575538	789624	12	281,102,76,157,132,117,153,122,269,118,278,1752,	0,19635,19963,20670,21427,22613,24178,25049,25435,27997,32394,33017,
#Partially deleted in new
chr16	57542653	57575639	chr16:57542653-57575639	0	+	57542653	57542653	8553170	11	48,102,76,157,132,117,153,122,269,278,202,	0,19402,19730,20437,21194,22380,23945,24816,25202,32161,32784,
#Partially deleted in new
chr16	57542653	57562601	chr16:57542653-57562601	0	+	57542653	57542653	8553170	3	48,102,218,	0,19402,19730,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	57542654	57577186	chr16:57542654-57577186	0	+	57542654	57542654	8553170	11	47,102,76,157,132,1718,122,269,118,278,1749,	0,19401,19729,20436,21193,22379,24815,25201,27763,32160,32783,
#Partially deleted in new
chr16	57542686	57565313	chr16:57542686-57565313	1	+	57562093	57565270	789624	6	15,102,76,157,132,280,	0,19369,19697,20404,21161,22347,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	57542688	57577195	chr16:57542688-57577195	1	+	57562093	57575538	789624	12	485,102,76,157,132,117,153,122,269,118,278,1758,	0,19367,19695,20402,21159,22345,23910,24781,25167,27729,32126,32749,
#Partially deleted in new
chr16	57574815	57591681	chr16:57574815-57591681	0	+	57574815	57574815	8553170	3	277,159,68,	0,15796,16798,
#Deleted in new
chr16	57603136	57603697	chr16:57603136-57603697	7	+	57603136	57603136	16724991	1	561,	0,
#Partially deleted in new
chr16	57619736	57651557	chr16:57619736-57651557	0	+	57650287	57651557	789624	3	145,99,358,	0,30516,31463,
#Partially deleted in new
chr16	57619737	57654031	chr16:57619737-57654031	0	+	57619737	57619737	8553170	5	144,99,423,133,42,	0,30515,31462,33465,34252,
#Partially deleted in new
chr16	57619750	57665032	chr16:57619750-57665032	0	+	57650287	57651472	789624	14	131,103,376,133,148,132,117,46,104,119,287,109,269,1581,	0,30502,31496,33452,34235,35648,36125,36475,36763,37622,39644,41017,41946,43701,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	57619997	57665580	chr16:57619997-57665580	3	+	57650287	57663582	789624	14	139,99,423,133,148,132,117,46,104,119,287,109,269,2129,	0,30255,31202,33205,33988,35401,35878,36228,36516,37375,39397,40770,41699,43454,
#Partially deleted in new
chr16	57620045	57651586	chr16:57620045-57651586	0	+	57620045	57620045	8553170	3	91,99,344,	0,30207,31197,
#Partially deleted in new
chr16	57620095	57651467	chr16:57620095-57651467	0	+	57650287	57651467	789624	4	41,155,99,268,	0,1595,30157,31104,
#Partially deleted in new
chr16	57620103	57651559	chr16:57620103-57651559	0	+	57650287	57651559	789624	3	33,99,375,	0,30149,31081,
#Partially deleted in new
chr16	57621335	57651491	chr16:57621335-57651491	0	+	57650287	57651491	789624	3	60,99,292,	0,28917,29864,
#Partially deleted in new
chr16	57627710	57653217	chr16:57627710-57653217	0	+	57650287	57653217	789624	4	57,99,423,15,	0,22542,23489,25492,
#Partially deleted in new
chr16	57628225	57651262	chr16:57628225-57651262	0	+	57650287	57651262	789624	4	182,143,99,63,	0,434,22027,22974,
#Partially deleted in new
chr16	57628299	57651614	chr16:57628299-57651614	0	+	57650287	57651614	789624	3	108,99,415,	0,21953,22900,
#Partially deleted in new
chr16	57628305	57665028	chr16:57628305-57665028	1	+	57650287	57663582	789624	14	497,99,423,133,148,132,117,46,104,119,269,109,269,1577,	0,21947,22894,24897,25680,27093,27570,27920,28208,29067,31107,32462,33391,35146,
#Partially deleted in new
chr16	57628323	57651604	chr16:57628323-57651604	0	+	57628323	57628323	8553170	3	84,99,362,	0,21929,22919,
#Partially deleted in new
chr16	57628337	57651457	chr16:57628337-57651457	0	+	57650287	57651457	789624	4	70,166,99,258,	0,299,21915,22862,
#Partially deleted in new
chr16	57628506	57665032	chr16:57628506-57665032	1	+	57650287	57663582	789624	14	296,99,438,133,148,132,117,46,104,119,269,109,269,1581,	0,21746,22678,24696,25479,26892,27369,27719,28007,28866,30906,32261,33190,34945,
#Partially deleted in new
chr16	57628521	57651483	chr16:57628521-57651483	0	+	57650287	57651483	789624	3	307,99,284,	0,21731,22678,
#Partially deleted in new
chr16	57628578	57653303	chr16:57628578-57653303	0	+	57650287	57651472	789624	4	224,99,380,101,	0,21674,22664,24624,
#Partially deleted in new
chr16	57628631	57651554	chr16:57628631-57651554	0	+	57650287	57651554	789624	3	171,99,370,	0,21621,22553,
#Partially deleted in new
chr16	57628634	57651464	chr16:57628634-57651464	0	+	57650287	57651464	789624	3	168,99,280,	0,21618,22550,
#Partially deleted in new
chr16	57631224	57651624	chr16:57631224-57651624	0	+	57650287	57651624	789624	3	43,99,440,	0,19028,19960,
#Partially deleted in new
chr16	57639412	57651417	chr16:57639412-57651417	0	+	57650287	57651417	789624	3	258,99,218,	0,10840,11787,
#Partially deleted in new
chr16	57639412	57651605	chr16:57639412-57651605	0	+	57639412	57639412	8553170	3	258,99,363,	0,10840,11830,
#Partially deleted in new
chr16	57639424	57663968	chr16:57639424-57663968	0	+	57650287	57651472	789624	14	246,99,380,133,148,132,117,46,104,119,269,109,269,517,	0,10828,11818,13778,14561,15974,16451,16801,17089,17948,19988,21343,22272,24027,
#Partially deleted in new
chr16	57639424	57651469	chr16:57639424-57651469	0	+	57650287	57651469	789624	3	246,103,223,	0,10828,11822,
#Partially deleted in new
chr16	57639441	57651474	chr16:57639441-57651474	0	+	57650287	57651474	789624	3	229,99,290,	0,10811,11743,
#Partially deleted in new
chr16	57639522	57653248	chr16:57639522-57653248	0	+	57650287	57653248	789624	4	148,99,267,46,	0,10730,11833,13680,
#Partially deleted in new
chr16	57643006	57651418	chr16:57643006-57651418	0	+	57650287	57651418	789624	3	236,99,219,	0,7246,8193,
#Partially deleted in new
chr16	57645946	57653217	chr16:57645946-57653217	0	+	57650287	57653217	789624	4	49,99,423,15,	0,4306,5253,7256,
#Partially deleted in new
chr16	57645961	57651597	chr16:57645961-57651597	0	+	57650287	57651597	789624	3	358,99,398,	0,4291,5238,
#Partially deleted in new
chr16	57646042	57651529	chr16:57646042-57651529	0	+	57650287	57651529	789624	3	107,99,330,	0,4210,5157,
#Partially deleted in new
chr16	57646131	57651449	chr16:57646131-57651449	0	+	57650287	57651449	789624	3	188,99,291,	0,4121,5027,
#Partially deleted in new
chr16	57646910	57653312	chr16:57646910-57653312	0	+	57650287	57653312	789624	4	102,99,423,110,	0,3342,4289,6292,
#Partially deleted in new
chr16	57646939	57651613	chr16:57646939-57651613	0	+	57650287	57651613	789624	3	73,99,429,	0,3313,4245,
#Partially deleted in new
chr16	57646941	57651528	chr16:57646941-57651528	0	+	57650287	57651528	789624	4	71,34,99,329,	0,1025,3311,4258,
#Partially deleted in new
chr16	57646976	57651502	chr16:57646976-57651502	0	+	57650287	57651502	789624	4	36,85,99,303,	0,939,3276,4223,
#Partially deleted in new
chr16	57647444	57651594	chr16:57647444-57651594	0	+	57650287	57651594	789624	3	51,99,395,	0,2808,3755,
#Deleted in new
chr16	57652792	57654044	chr16:57652792-57654044	0	+	57652792	57652792	8553170	2	543,59,	0,1193,
#Partially deleted in new
chr16	57653230	57660855	chr16:57653230-57660855	0	+	57653230	57660855	789624	6	105,148,132,33,55,88,	0,755,2168,2645,6396,7537,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	57668186	57689378	chr16:57668186-57689378	3	+	57668347	57688461	789624	12	219,148,139,147,135,40,101,113,281,94,284,1027,	0,5134,8013,9983,10990,11629,12078,12318,15745,16203,17456,20165,
#Partially deleted in new
chr16	57668276	57678282	chr16:57668276-57678282	0	+	57668347	57674592	789624	5	129,148,61,139,113,	0,5044,6312,7923,9893,
#Partially deleted in new
chr16	57668305	57678839	chr16:57668305-57678839	0	+	57668305	57668305	8553170	4	100,148,139,670,	0,5015,7894,9864,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	57668307	57688695	chr16:57668307-57688695	1	+	57678184	57688461	789624	11	98,148,147,135,40,101,113,281,94,284,344,	0,5013,9862,10869,11508,11957,12197,15624,16082,17335,20044,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	57668316	57689378	chr16:57668316-57689378	0	+	57668347	57684456	789624	11	89,148,139,147,135,40,101,113,94,284,1027,	0,5004,7883,9853,10860,11499,11948,12188,16073,17326,20035,
#Partially deleted in new
chr16	57668322	57678626	chr16:57668322-57678626	0	+	57668322	57668322	8553170	3	83,148,457,	0,4998,9847,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	57679797	57688916	chr16:57679797-57688916	0	+	57679797	57679797	8553170	6	58,101,113,94,284,565,	0,467,707,4592,5845,8554,
#Partially deleted in new
chr16	57681123	57701730	chr16:57681123-57701730	3	-	57681123	57681123	8553170	6	87,146,108,214,168,81,	0,4696,5589,16777,20236,20526,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	57694792	57698928	chr16:57694792-57698928	0	+	57697949	57698928	789624	4	60,192,240,79,	0,1610,3120,4057,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr16	57694799	57731453	chr16:57694799-57731453	3	+	57697949	57731258	789624	19	53,131,240,175,126,195,159,219,129,73,129,129,221,216,111,111,195,140,289,	0,1664,3113,4050,5345,7136,10076,12660,23547,26867,27913,28202,29815,31268,32032,32499,33590,36131,36365,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	57694800	57702001	chr16:57694800-57702001	0	+	57700177	57702001	789624	4	52,192,126,66,	0,1602,5344,7135,
#Partially deleted in new
chr16	57694805	57731455	chr16:57694805-57731455	1	+	57697949	57731258	789624	18	47,240,175,126,195,159,219,129,73,129,129,221,216,111,111,195,140,291,	0,3107,4044,5339,7130,10070,12654,23541,26861,27907,28196,29809,31262,32026,32493,33584,36125,36359,
#Partially deleted in new
chr16	57694810	57700267	chr16:57694810-57700267	0	+	57697949	57700267	789624	4	42,240,184,123,	0,3102,4039,5334,
#Partially deleted in new
chr16	57694816	57702032	chr16:57694816-57702032	0	+	57697949	57700154	789624	4	36,240,126,97,	0,3096,5328,7119,
#Partially deleted in new
chr16	57694835	57731454	chr16:57694835-57731454	1	+	57697949	57731258	789624	17	17,240,175,126,159,219,129,73,129,129,221,216,111,111,195,140,290,	0,3077,4014,5309,10040,12624,23511,26831,27877,28166,29779,31232,31996,32463,33554,36095,36329,
#Deleted in new
chr16	57704906	57707861	chr16:57704906-57707861	0	+	57704906	57707810	789624	2	128,402,	0,2553,
#Partially deleted in new
chr16	57713781	57714957	chr16:57713781-57714957	7	+	57713781	57713781	16724991	2	555,256,	0,920,
#Partially deleted in new
chr16	57721691	57731805	chr16:57721691-57731805	0	+	57721691	57731258	789624	9	48,129,129,221,216,111,195,140,641,	0,1021,1310,2923,4376,5607,6698,9239,9473,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	57725473	57731453	chr16:57725473-57731453	0	+	57725473	57725473	8553170	4	1936,195,140,289,	0,2916,5457,5691,
#Partially deleted in new
chr16	57735729	57757250	chr16:57735729-57757250	3	+	57737243	57756946	789624	20	126,306,131,118,101,42,84,116,72,151,191,131,51,68,120,150,77,75,117,437,	0,1248,5957,8664,15097,15531,15911,16210,16800,17048,17347,17659,18215,19200,19389,19615,20111,20262,20626,21084,
#Partially deleted in new
chr16	57735738	57752055	chr16:57735738-57752055	0	+	57737243	57752055	789624	9	117,86,58,131,118,101,42,84,116,	0,1239,1487,5948,8655,15088,15522,15902,16201,
#Partially deleted in new
chr16	57735790	57752036	chr16:57735790-57752036	0	+	57737015	57752036	789624	8	65,90,131,118,101,42,84,97,	0,1187,5896,8603,15036,15470,15850,16149,
#Partially deleted in new
chr16	57735863	57756885	chr16:57735863-57756885	0	+	57735863	57735863	8553170	15	253,306,131,118,101,42,84,1328,131,51,68,120,150,77,894,	0,1114,5823,8530,14963,15397,15777,16076,17525,18081,19066,19255,19481,19977,20128,
#Partially deleted in new
chr16	57736762	57744459	chr16:57736762-57744459	0	+	57737243	57744459	789624	4	116,306,131,66,	0,215,4924,7631,
#Partially deleted in new
chr16	57736972	57751660	chr16:57736972-57751660	0	+	57737243	57751660	789624	5	311,131,118,42,20,	0,4714,7421,14288,14668,
#Partially deleted in new
chr16	57737191	57752104	chr16:57737191-57752104	0	+	57737191	57737191	8553170	7	92,131,118,101,42,84,165,	0,4495,7202,13635,14069,14449,14748,
#Deleted in new
chr16	57753456	57756868	chr16:57753456-57756868	0	+	57753456	57756868	789624	9	63,51,68,120,150,128,75,117,55,	0,488,1473,1662,1888,2333,2535,2899,3357,
#Deleted in new
chr16	57755145	57756895	chr16:57755145-57756895	0	+	57755145	57755145	8553170	5	93,150,226,117,82,	0,199,695,1210,1668,
#Deleted in new
chr16	57755447	57756884	chr16:57755447-57756884	0	+	57755447	57755447	8553170	4	47,277,117,71,	0,342,908,1366,
#Partially deleted in new
chr16	57758216	57802588	chr16:57758216-57802588	3	-	57758883	57798243	0	19	693,109,135,230,130,124,131,105,182,112,131,148,174,240,144,66,143,211,219,	0,1511,2065,2509,2825,3196,3923,5926,7242,8657,11378,11591,12310,12981,13326,14006,36782,39855,44153,
#Partially deleted in new
chr16	57758216	57797764	chr16:57758216-57797764	1	-	57759148	57771650	0	20	693,29,109,135,230,130,124,131,105,182,112,131,148,174,240,144,66,139,143,60,	0,908,1511,2065,2509,2825,3196,3923,5926,7242,8657,11378,11591,12310,12981,13326,14006,30358,36782,39488,
#Partially deleted in new
chr16	57758218	57802513	chr16:57758218-57802513	1	-	57759148	57798243	0	20	691,29,109,135,230,130,124,131,105,182,112,131,148,174,240,144,66,143,211,144,	0,906,1509,2063,2507,2823,3194,3921,5924,7240,8655,11376,11589,12308,12979,13324,14004,36780,39853,44151,
#Deleted in new
chr16	57758319	57760945	chr16:57758319-57760945	0	-	57758540	57760945	789624	2	590,220,	0,2406,
#Partially deleted in new
chr16	57758427	57798017	chr16:57758427-57798017	1	-	57759148	57771650	0	19	482,29,109,135,230,130,124,131,105,182,112,131,148,174,240,144,66,143,313,	0,697,1300,1854,2298,2614,2985,3712,5715,7031,8446,11167,11380,12099,12770,13115,13795,36571,39277,
#Partially deleted in new
chr16	57758444	57803023	chr16:57758444-57803023	1	-	57759148	57803012	0	20	465,29,109,135,230,130,124,131,105,182,112,131,148,174,240,144,66,143,211,38,	0,680,1283,1837,2281,2597,2968,3695,5698,7014,8429,11150,11363,12082,12753,13098,13778,36554,39627,44541,
#Partially deleted in new
chr16	57758458	57775119	chr16:57758458-57775119	1	-	57759148	57774988	789624	18	451,29,109,135,230,130,124,131,105,182,112,131,148,174,240,144,66,140,	0,666,1269,1823,2267,2583,2954,3681,5684,7000,8415,11136,11349,12068,12739,13084,13764,16521,
#Partially deleted in new
chr16	57758531	57782297	chr16:57758531-57782297	1	-	57759148	57771650	789624	18	378,29,109,135,230,130,124,131,96,182,112,131,148,174,240,144,66,459,	0,593,1196,1750,2194,2510,2881,3608,5611,6927,8342,11063,11276,11995,12666,13011,13691,23307,
#Deleted in new
chr16	57759357	57760024	chr16:57759357-57760024	3	+	57759357	57759357	8553170	1	667,	0,
#Deleted in new
chr16	57759437	57761261	chr16:57759437-57761261	0	-	57759437	57759437	8553170	2	441,32,	0,1792,
#Partially deleted in new
chr16	57759752	57764389	chr16:57759752-57764389	0	-	57759752	57764148	789624	7	84,135,230,130,124,131,247,	0,529,973,1289,1660,2387,4390,
#Deleted in new
chr16	57762194	57765845	chr16:57762194-57765845	0	-	57762194	57762194	8553170	3	76,105,387,	0,1948,3264,
#Partially deleted in new
chr16	57770606	57802934	chr16:57770606-57802934	0	-	57770606	57771650	789624	7	94,240,144,66,143,58,43,	0,591,936,1616,24392,27358,32285,
#Partially deleted in new
chr16	57771285	57798100	chr16:57771285-57798100	0	-	57771285	57785604	789624	6	152,144,66,203,143,29,	0,257,937,14178,23713,26786,
#Partially deleted in new
chr16	57771323	57775119	chr16:57771323-57775119	0	-	57771323	57774988	789624	4	114,123,66,140,	0,219,899,3656,
#Partially deleted in new
chr16	57771335	57802494	chr16:57771335-57802494	0	-	57771335	57771650	789624	7	102,144,66,139,143,58,125,	0,207,887,17239,23663,26629,31034,
#Partially deleted in new
chr16	57771364	57802449	chr16:57771364-57802449	0	-	57771364	57771650	789624	6	73,144,66,143,58,80,	0,178,858,23634,26600,31005,
#Partially deleted in new
chr16	57771367	57803253	chr16:57771367-57803253	0	-	57771367	57771650	789624	6	70,144,66,143,58,70,	0,175,855,23631,26597,31816,
#Partially deleted in new
chr16	57771559	57803295	chr16:57771559-57803295	0	-	57771559	57771559	8553170	4	127,66,211,112,	0,663,26512,31624,
#Partially deleted in new
chr16	57771579	57803422	chr16:57771579-57803422	0	-	57771579	57803343	789624	5	107,66,143,211,124,	0,643,23419,26492,31719,
#Partially deleted in new
chr16	57771629	57797812	chr16:57771629-57797812	0	-	57771629	57785604	789624	5	57,66,203,143,108,	0,593,13834,23369,26075,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	57771635	57779540	chr16:57771635-57779540	0	-	57771635	57771650	8553170	3	51,66,180,	0,587,7725,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	57771635	57782329	chr16:57771635-57782329	0	-	57771635	57771650	8553170	4	51,66,90,491,	0,587,7725,10203,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	57771660	57797912	chr16:57771660-57797912	0	-	57771660	57771660	8553170	5	26,66,137,143,208,	0,562,19269,23338,26044,
#Partially deleted in new
chr16	57771670	57846535	chr16:57771670-57846535	0	-	57771670	57798243	789624	5	16,66,143,211,187,	0,552,23328,26401,74678,
#Deleted in new
chr16	57772288	57772352	chr16:57772288-57772352	3	-	57772288	57772288	5263520	1	64,	0,
#Partially deleted in new
chr16	57773807	57775076	chr16:57773807-57775076	0	-	57773807	57773807	8553170	2	461,97,	0,1172,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	57774708	57777101	chr16:57774708-57777101	0	-	57774708	57774708	8553170	1	2393,	0,
#Partially deleted in new
chr16	57776621	57782303	chr16:57776621-57782303	0	-	57776621	57776621	8553170	2	69,465,	0,5217,
#Partially deleted in new
chr16	57785397	57802470	chr16:57785397-57802470	0	-	57785397	57785397	8553170	4	269,143,211,101,	0,9601,12674,16972,
#Partially deleted in new
chr16	57788597	57803024	chr16:57788597-57803024	0	-	57788597	57803012	789624	4	116,143,211,39,	0,6401,9474,14388,
#Partially deleted in new
chr16	57794996	57863053	chr16:57794996-57863053	0	-	57794996	57862836	789624	3	145,211,325,	0,3075,67732,
#Partially deleted in new
chr16	57794998	57803253	chr16:57794998-57803253	0	-	57794998	57798243	789624	3	143,211,70,	0,3073,8185,
#Partially deleted in new
chr16	57795062	57803247	chr16:57795062-57803247	0	-	57795062	57795062	8553170	3	79,318,64,	0,2642,8121,
#Partially deleted in new
chr16	57798185	57813811	chr16:57798185-57813811	0	+	57798185	57798185	8553170	2	447,150,	0,15476,
#Partially deleted in new
chr16	57798264	57807952	chr16:57798264-57807952	3	+	57798264	57798264	8553170	2	368,350,	0,9338,
#Partially deleted in new
chr16	57810636	57816946	chr16:57810636-57816946	1	+	57810636	57810636	8553170	4	148,220,222,727,	0,3025,4787,5583,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr16	57882339	57971112	chr16:57882339-57971112	3	-	57884163	57967286	789624	33	2118,220,147,119,84,98,160,142,123,65,87,51,209,156,158,108,163,163,88,87,160,37,76,178,49,76,46,31,91,73,58,167,53,	0,5515,15057,15456,19012,19188,21482,22394,29413,30590,32909,33789,34928,36759,38047,40933,49376,57090,57894,67013,68041,75001,76070,77548,78142,78500,80225,80502,80634,81790,82147,84788,88720,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr16	57883598	57971112	chr16:57883598-57971112	1	-	57884163	57967286	789624	33	859,220,147,119,84,98,160,142,123,65,87,51,209,156,158,108,163,163,88,87,160,37,76,178,31,76,46,31,91,73,58,167,53,	0,4256,13798,14197,17753,17929,20223,21135,28154,29331,31650,32530,33669,35500,36788,39674,48117,55831,56635,65754,66782,73742,74811,76289,76901,77241,78966,79243,79375,80531,80888,83529,87461,
#Partially deleted in new
chr16	57884367	57901373	chr16:57884367-57901373	0	-	57884367	57901373	789624	4	90,147,119,22,	0,13029,13428,16984,
#Partially deleted in new
chr16	57897855	57911901	chr16:57897855-57911901	0	-	57897855	57897855	8553170	6	59,84,98,160,142,149,	0,3496,3672,5966,6878,13897,
#Partially deleted in new
chr16	57923112	57939549	chr16:57923112-57939549	0	-	57923112	57923112	8553170	2	268,120,	0,16317,
#Partially deleted in new
chr16	57931764	57946625	chr16:57931764-57946625	0	-	57931764	57937314	789624	5	114,268,163,88,242,	0,5327,7665,8469,14619,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	57954674	57971116	chr16:57954674-57971116	1	-	57955342	57967286	789624	13	694,37,76,178,49,76,46,31,91,73,58,167,57,	0,2666,3735,5213,5807,6165,7890,8167,8299,9455,9812,12453,16385,
#Partially deleted in new
chr16	57960005	57967352	chr16:57960005-57967352	0	-	57960005	57967286	789624	9	60,49,76,46,31,91,73,58,225,	0,476,834,2559,2836,2968,4124,4481,7122,
#Partially deleted in new
chr16	57963924	57971109	chr16:57963924-57971109	0	-	57963924	57963924	8553170	4	278,58,167,50,	0,562,3203,7135,
#Partially deleted in new
chr16	57976434	57987571	chr16:57976434-57987571	3	+	57976471	57987426	789624	8	200,225,62,175,62,146,33,176,	0,1380,7868,8201,8771,8966,9474,10961,
#Partially deleted in new
chr16	57976434	57987571	chr16:57976434-57987571	1	+	57976471	57987426	789624	8	200,225,62,175,62,65,33,176,	0,1380,7868,8201,8771,9047,9474,10961,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	57985180	57988116	chr16:57985180-57988116	0	+	57985180	57985180	8553170	3	87,65,2208,	0,301,728,
#Deleted in new
chr16	57994667	57999858	chr16:57994667-57999858	3	-	57996516	57998265	789624	2	3855,366,	0,4825,
#Deleted in new
chr16	57998058	58000453	chr16:57998058-58000453	0	-	57998058	57998265	789624	2	464,53,	0,2342,
#Partially deleted in new
chr16	57999545	58020542	chr16:57999545-58020542	1	+	58002533	58020245	789624	7	138,167,184,54,106,84,402,	0,2933,10383,14727,17788,19426,20595,
#Partially deleted in new
chr16	58001372	58021618	chr16:58001372-58021618	3	+	58001483	58020245	0	7	209,167,184,54,106,84,1478,	0,1106,8556,12900,15961,17599,18768,
#Partially deleted in new
chr16	58001404	58020634	chr16:58001404-58020634	1	+	58001483	58020245	0	6	177,167,184,106,84,494,	0,1074,8524,15929,17567,18736,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	58001406	58011708	chr16:58001406-58011708	1	+	58001483	58011129	0	4	175,167,184,691,	0,1072,8522,9611,
#Partially deleted in new
chr16	58001406	58017417	chr16:58001406-58017417	0	+	58001529	58017417	789624	5	182,167,184,54,84,	0,1072,8522,12866,15927,
#Partially deleted in new
chr16	58001406	58019036	chr16:58001406-58019036	0	+	58001406	58001406	8553170	6	175,167,184,22,106,65,	0,1072,8522,12866,15927,17565,
#Partially deleted in new
chr16	58001415	58017440	chr16:58001415-58017440	0	+	58001415	58001415	8553170	6	166,21,30,184,54,107,	0,1063,1200,8513,12857,15918,
#Partially deleted in new
chr16	58001415	58010170	chr16:58001415-58010170	0	+	58001415	58001415	8553170	3	166,167,242,	0,1063,8513,
#Partially deleted in new
chr16	58001415	58014310	chr16:58001415-58014310	0	+	58001415	58001415	8553170	4	166,185,184,38,	0,1063,8513,12857,
#Partially deleted in new
chr16	58001418	58011475	chr16:58001418-58011475	0	+	58001418	58001418	8553170	4	163,167,184,34,	0,1060,8510,10023,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	58001419	58013558	chr16:58001419-58013558	1	+	58001483	58012363	789624	4	162,167,184,1238,	0,1059,8509,10901,
#Partially deleted in new
chr16	58001420	58017380	chr16:58001420-58017380	0	+	58001483	58010006	789624	5	161,112,184,54,47,	0,1058,8508,12852,15913,
#Partially deleted in new
chr16	58001423	58017418	chr16:58001423-58017418	0	+	58001423	58001423	8553170	4	158,167,54,85,	0,1055,12849,15910,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	58010662	58013557	chr16:58010662-58013557	0	+	58010662	58010662	8553170	1	2895,	0,
#Partially deleted in new
chr16	58013628	58019053	chr16:58013628-58019053	0	+	58013628	58013628	8553170	3	698,106,82,	0,3705,5343,
#Partially deleted in new
chr16	58015112	58021617	chr16:58015112-58021617	0	+	58015112	58015112	8553170	3	2327,84,1477,	0,3859,5028,
#Partially deleted in new
chr16	58025565	58046901	chr16:58025565-58046901	3	+	58026350	58045446	789624	10	947,149,129,308,162,254,139,151,116,1895,	0,11906,12700,14309,14971,16051,16665,17644,17946,19441,
#Deleted in new
chr16	58040164	58040867	chr16:58040164-58040867	0	+	58040164	58040811	789624	2	18,331,	0,372,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	58083067	58083168	chr16:58083067-58083168	3	-	58083067	58083067	8553170	1	101,	0,
#Deleted in new
chr16	58092052	58092947	chr16:58092052-58092947	7	-	58092052	58092052	16724991	1	895,	0,
#Partially deleted in new
chr16	58113587	58129450	chr16:58113587-58129450	3	-	58114024	58129115	789624	6	443,111,189,112,80,419,	0,1222,1681,2453,3284,15444,
#Partially deleted in new
chr16	58113605	58129371	chr16:58113605-58129371	0	-	58113605	58113605	789624	5	425,648,112,80,340,	0,1204,2435,3266,15426,
#Partially deleted in new
chr16	58113959	58115567	chr16:58113959-58115567	0	-	58113959	58113959	8553170	3	71,111,299,	0,850,1309,
#Deleted in new
chr16	58114961	58115450	chr16:58114961-58115450	0	-	58114961	58114961	8553170	2	94,182,	0,307,
#Partially deleted in new
chr16	58115400	58129361	chr16:58115400-58129361	0	-	58115400	58129115	789624	4	50,112,80,330,	0,640,1471,13631,
#Partially deleted in new
chr16	58115791	58129300	chr16:58115791-58129300	0	-	58115791	58115791	8553170	3	361,80,269,	0,1080,13240,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	58116557	58129368	chr16:58116557-58129368	0	-	58116557	58116557	8553170	2	394,337,	0,12474,
#Partially deleted in new
chr16	58116884	58119353	chr16:58116884-58119353	3	+	58116884	58116884	8553170	2	194,221,	0,2248,
#Partially deleted in new
chr16	58129528	58159133	chr16:58129528-58159133	3	+	58129528	58129528	8553170	4	135,100,122,220,	0,8422,27538,29385,
#Partially deleted in new
chr16	58157906	58197920	chr16:58157906-58197920	3	-	58164070	58197736	0	12	447,94,149,101,102,111,84,60,51,102,112,288,	0,6147,7653,8677,9300,9778,10703,16544,26353,28848,38826,39726,
#Partially deleted in new
chr16	58157906	58192886	chr16:58157906-58192886	0	-	58157906	58157906	8553170	11	447,94,149,101,102,111,84,60,51,102,268,	0,6147,7653,8677,9300,9778,10703,16544,26353,28848,34712,
#Partially deleted in new
chr16	58158116	58186856	chr16:58158116-58186856	0	-	58164070	58186856	789624	8	237,94,149,101,102,111,51,102,	0,5937,7443,8467,9090,9568,26143,28638,
#Partially deleted in new
chr16	58159550	58167713	chr16:58159550-58167713	0	-	58164070	58167713	789624	5	4597,149,101,102,29,	0,6009,7033,7656,8134,
#Partially deleted in new
chr16	58174017	58196773	chr16:58174017-58196773	0	-	58174017	58174017	8553170	4	493,51,102,41,	0,10242,12737,22715,
#Partially deleted in new
chr16	58174474	58197878	chr16:58174474-58197878	0	-	58174474	58197736	789624	5	36,51,102,112,246,	0,9785,12280,22258,23158,
#Partially deleted in new
chr16	58197111	58217805	chr16:58197111-58217805	3	+	58197111	58197111	8553170	2	77,253,	0,20441,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	58199567	58199836	chr16:58199567-58199836	3	-	58199567	58199567	8553170	1	269,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	58231156	58254096	chr16:58231156-58254096	0	+	58252760	58254096	789624	4	58,272,127,99,	0,3683,21570,22841,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	58249935	58283836	chr16:58249935-58283836	3	+	58250014	58279777	789624	9	180,127,162,156,81,156,108,156,4146,	0,2791,4062,8432,9918,12449,17543,28546,29755,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	58249935	58283836	chr16:58249935-58283836	1	+	58250014	58279777	789624	8	180,127,156,81,156,108,156,4146,	0,2791,8432,9918,12449,17543,28546,29755,
#Partially deleted in new
chr16	58249951	58262540	chr16:58249951-58262540	0	+	58250014	58258443	789624	4	164,156,81,156,	0,8416,9902,12433,
#Partially deleted in new
chr16	58249976	58267549	chr16:58249976-58267549	1	+	58250014	58259881	789624	8	139,127,162,156,15,65,156,71,	0,2750,4021,8391,9877,9893,12408,17502,
#Partially deleted in new
chr16	58249987	58252767	chr16:58249987-58252767	0	+	58249987	58249987	8553170	2	453,41,	0,2739,
#Partially deleted in new
chr16	58279996	58295047	chr16:58279996-58295047	3	-	58280223	58293816	789624	7	761,132,259,178,91,228,161,	0,4593,5940,10962,13735,13988,14890,
#Partially deleted in new
chr16	58279996	58295039	chr16:58279996-58295039	1	-	58280223	58293816	789624	7	761,132,259,178,91,225,153,	0,4593,5940,10962,13735,13988,14890,
#Partially deleted in new
chr16	58280002	58294976	chr16:58280002-58294976	1	-	58280223	58286161	789624	6	755,132,259,91,228,90,	0,4587,5934,13729,13982,14884,
#Partially deleted in new
chr16	58280504	58294983	chr16:58280504-58294983	0	-	58280504	58286161	789624	6	253,132,259,91,225,97,	0,4085,5432,13227,13480,14382,
#Partially deleted in new
chr16	58284404	58285302	chr16:58284404-58285302	0	-	58284404	58284404	8553170	2	317,117,	0,781,
#Partially deleted in new
chr16	58284684	58295047	chr16:58284684-58295047	0	-	58284684	58293816	789624	6	37,259,178,91,228,161,	0,1252,6274,9047,9300,10202,
#Partially deleted in new
chr16	58295079	58299973	chr16:58295079-58299973	0	+	58295079	58295079	8553170	2	455,88,	0,4806,
#Partially deleted in new
chr16	58295396	58392574	chr16:58295396-58392574	0	+	58295396	58295396	8553170	3	138,87,345,	0,34466,96833,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	58368043	58386702	chr16:58368043-58386702	0	+	58368043	58368043	8553170	2	240,82,	0,18577,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	58378051	58378148	chr16:58378051-58378148	3	-	58378051	58378051	8553170	1	97,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	58382988	58383798	chr16:58382988-58383798	3	-	58382988	58382988	8553170	2	181,193,	0,617,
#Deleted in new
chr16	58384441	58384542	chr16:58384441-58384542	3	-	58384441	58384441	8553170	1	101,	0,
#Deleted in new
chr16	58392152	58392807	chr16:58392152-58392807	3	-	58392152	58392152	8553170	1	655,	0,
#Partially deleted in new
chr16	58392393	58406144	chr16:58392393-58406144	3	+	58392601	58404729	0	3	394,234,1646,	0,10704,12105,
#Partially deleted in new
chr16	58392393	58406036	chr16:58392393-58406036	1	+	58392601	58404729	0	2	394,1538,	0,12105,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	58392393	58405481	chr16:58392393-58405481	1	+	58392601	58404729	0	4	394,117,234,983,	0,2708,10704,12105,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	58392697	58393673	chr16:58392697-58393673	0	+	58392697	58392697	8553170	2	90,120,	0,856,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	58402941	58406143	chr16:58402941-58406143	0	+	58402941	58402941	8553170	1	3202,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	58421338	58462470	chr16:58421338-58462470	3	+	58421338	58421338	8553170	4	83,132,112,317,	0,14353,40132,40815,
#Partially deleted in new
chr16	58462845	58504649	chr16:58462845-58504649	0	+	58487778	58504649	789624	7	65,95,45,106,121,63,61,	0,24910,32118,40952,41308,41513,41743,
#Partially deleted in new
chr16	58463369	58504642	chr16:58463369-58504642	0	+	58487778	58504642	789624	7	66,95,45,106,121,63,54,	0,24386,31594,40428,40784,40989,41219,
#Partially deleted in new
chr16	58463630	58504258	chr16:58463630-58504258	0	+	58487778	58503711	789624	5	167,95,45,198,105,	0,24125,31333,40075,40523,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	58463664	58513628	chr16:58463664-58513628	1	+	58487778	58511576	789624	16	133,95,45,106,121,63,61,87,57,104,57,52,48,36,52,2207,	0,24091,31299,40133,40489,40694,40924,42722,42893,43247,44143,44283,45297,45489,45636,47757,
#Partially deleted in new
chr16	58463703	58504397	chr16:58463703-58504397	0	+	58487778	58504397	789624	7	94,95,45,90,106,121,39,	0,24052,31260,37284,40094,40450,40655,
#Partially deleted in new
chr16	58463709	58506946	chr16:58463709-58506946	0	+	58504191	58506946	789624	8	88,106,121,63,61,87,57,35,	0,40088,40444,40649,40879,42677,42848,43202,
#Partially deleted in new
chr16	58463712	58506461	chr16:58463712-58506461	0	+	58487778	58506461	789624	8	85,95,45,160,121,63,61,75,	0,24043,31251,40031,40441,40646,40876,42674,
#Partially deleted in new
chr16	58463715	58506956	chr16:58463715-58506956	0	+	58463715	58463715	8553170	4	82,87,57,45,	0,42671,42842,43196,
#Partially deleted in new
chr16	58463722	58504661	chr16:58463722-58504661	0	+	58487778	58504661	789624	6	75,95,106,121,63,73,	0,24033,40075,40431,40636,40866,
#Partially deleted in new
chr16	58463724	58504629	chr16:58463724-58504629	0	+	58487778	58504629	789624	8	73,46,95,45,106,121,63,41,	0,11887,24031,31239,40073,40429,40634,40864,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	58464023	58513619	chr16:58464023-58513619	3	+	58464430	58511576	789624	16	444,95,45,106,121,63,61,87,57,104,57,52,48,36,52,2198,	0,23732,30940,39774,40130,40335,40565,42363,42534,42888,43784,43924,44938,45130,45277,47398,
#Partially deleted in new
chr16	58464281	58504254	chr16:58464281-58504254	0	+	58464430	58487810	789624	6	186,46,95,45,106,101,	0,11330,23474,30682,39516,39872,
#Partially deleted in new
chr16	58464281	58503876	chr16:58464281-58503876	0	+	58464281	58464281	8553170	4	186,95,45,171,	0,23474,30682,39424,
#Partially deleted in new
chr16	58464281	58504277	chr16:58464281-58504277	0	+	58464430	58504277	789624	5	186,95,45,160,124,	0,23474,30682,39462,39872,
#Partially deleted in new
chr16	58464300	58513413	chr16:58464300-58513413	0	+	58464300	58464300	8553170	18	167,95,45,1934,106,121,63,61,87,57,104,57,52,48,36,52,39,1992,	0,23455,30663,34843,39497,39853,40058,40288,42086,42257,42611,43507,43647,44661,44853,45000,46344,47121,
#Partially deleted in new
chr16	58464300	58499398	chr16:58464300-58499398	0	+	58464300	58464300	8553170	4	167,95,45,255,	0,23455,30663,34843,
#Partially deleted in new
chr16	58464303	58504240	chr16:58464303-58504240	0	+	58464430	58504240	789624	6	164,95,45,90,106,87,	0,23452,30660,36684,39494,39850,
#Partially deleted in new
chr16	58464305	58504265	chr16:58464305-58504265	0	+	58487778	58504265	789624	6	162,46,95,45,106,112,	0,11306,23450,30658,39492,39848,
#Partially deleted in new
chr16	58464305	58506431	chr16:58464305-58506431	0	+	58504191	58506431	789624	6	162,106,121,63,61,45,	0,39492,39848,40053,40283,42081,
#Partially deleted in new
chr16	58464312	58495008	chr16:58464312-58495008	0	+	58487778	58495008	789624	4	155,250,95,45,	0,509,23443,30651,
#Partially deleted in new
chr16	58464317	58511460	chr16:58464317-58511460	0	+	58464430	58507828	789624	9	150,95,45,57,52,48,36,52,39,	0,23438,30646,43490,43630,44644,44836,44983,47104,
#Partially deleted in new
chr16	58464773	58504607	chr16:58464773-58504607	0	+	58487778	58504607	789624	7	298,95,45,106,121,63,19,	0,22982,30190,39024,39380,39585,39815,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	58464821	58513618	chr16:58464821-58513618	1	+	58487778	58511576	789624	16	250,95,45,106,121,63,61,87,57,104,57,52,48,36,52,2197,	0,22934,30142,38976,39332,39537,39767,41565,41736,42090,42986,43126,44140,44332,44479,46600,
#Partially deleted in new
chr16	58465041	58504661	chr16:58465041-58504661	0	+	58465219	58504661	789624	7	194,95,45,106,121,63,73,	0,22714,29922,38756,39112,39317,39547,
#Partially deleted in new
chr16	58472186	58504633	chr16:58472186-58504633	0	+	58487778	58504633	789624	7	110,95,45,106,121,63,45,	0,15569,22777,31611,31967,32172,32402,
#Partially deleted in new
chr16	58495455	58507197	chr16:58495455-58507197	0	+	58495455	58495455	8553170	8	98,106,121,63,61,87,57,286,	0,8342,8698,8903,9133,10931,11102,11456,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	58496907	58497014	chr16:58496907-58497014	3	+	58496907	58496907	8553170	1	107,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	58500046	58513619	chr16:58500046-58513619	1	+	58500248	58511576	789624	14	223,106,121,63,61,87,57,104,57,52,48,36,52,2198,	0,3751,4107,4312,4542,6340,6511,6865,7761,7901,8915,9107,9254,11375,
#Deleted in new
chr16	58500089	58504618	chr16:58500089-58504618	0	+	58500248	58504618	789624	6	180,90,106,121,63,30,	0,898,3708,4064,4269,4499,
#Partially deleted in new
chr16	58500106	58511641	chr16:58500106-58511641	1	+	58500248	58511576	789624	14	163,160,121,63,61,87,57,104,57,52,48,36,52,220,	0,3637,4047,4252,4482,6280,6451,6805,7701,7841,8855,9047,9194,11315,
#Partially deleted in new
chr16	58500142	58511735	chr16:58500142-58511735	1	+	58500248	58511576	789624	15	127,90,106,121,63,61,87,57,104,57,52,48,36,52,314,	0,845,3655,4011,4216,4446,6244,6415,6769,7665,7805,8819,9011,9158,11279,
#Deleted in new
chr16	58500142	58504385	chr16:58500142-58504385	0	+	58500248	58503711	789624	5	127,90,198,121,27,	0,845,3563,4011,4216,
#Partially deleted in new
chr16	58500142	58513417	chr16:58500142-58513417	1	+	58500248	58511576	789624	13	127,106,121,63,61,87,57,104,57,52,48,52,1996,	0,3655,4011,4216,4446,6244,6415,6769,7665,7805,8819,9158,11279,
#Deleted in new
chr16	58500142	58504259	chr16:58500142-58504259	0	+	58500142	58500142	8553170	2	127,462,	0,3655,
#Deleted in new
chr16	58500142	58501395	chr16:58500142-58501395	0	+	58500142	58500142	8553170	2	127,408,	0,845,
#Partially deleted in new
chr16	58500142	58513410	chr16:58500142-58513410	1	+	58500248	58511576	789624	14	127,160,121,63,61,87,57,104,57,52,48,36,52,1989,	0,3655,4011,4216,4446,6244,6415,6769,7665,7805,8819,9011,9158,11279,
#Partially deleted in new
chr16	58500142	58506409	chr16:58500142-58506409	0	+	58503885	58506409	789624	6	127,198,86,63,61,23,	0,3563,4046,4216,4446,6244,
#Deleted in new
chr16	58500142	58504254	chr16:58500142-58504254	0	+	58500248	58502053	789624	5	127,90,175,106,101,	0,845,1830,3655,4011,
#Partially deleted in new
chr16	58500142	58511670	chr16:58500142-58511670	1	+	58504191	58511576	789624	14	127,198,121,63,61,87,57,104,57,52,48,36,52,249,	0,3563,4011,4216,4446,6244,6415,6769,7665,7805,8819,9011,9158,11279,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	58500142	58513618	chr16:58500142-58513618	1	+	58500248	58511576	789624	15	127,106,121,63,61,87,57,104,57,52,48,36,52,39,2197,	0,3655,4011,4216,4446,6244,6415,6769,7665,7805,8819,9011,9158,10502,11279,
#Deleted in new
chr16	58500144	58504381	chr16:58500144-58504381	0	+	58504191	58504381	789624	5	125,200,106,121,23,	0,1803,3653,4009,4214,
#Partially deleted in new
chr16	58500144	58506435	chr16:58500144-58506435	0	+	58500144	58500144	8553170	6	125,90,477,63,61,49,	0,843,3653,4214,4444,6242,
#Deleted in new
chr16	58500144	58504733	chr16:58500144-58504733	0	+	58500144	58500144	8553170	5	125,106,121,63,145,	0,3653,4009,4214,4444,
#Deleted in new
chr16	58500145	58504192	chr16:58500145-58504192	0	+	58503885	58504192	789624	4	124,203,198,39,	0,1799,3560,4008,
#Deleted in new
chr16	58501467	58504636	chr16:58501467-58504636	0	+	58504191	58504636	789624	5	211,106,121,63,48,	0,2330,2686,2891,3121,
#Partially deleted in new
chr16	58501502	58506590	chr16:58501502-58506590	0	+	58504191	58506590	789624	7	110,106,121,63,61,87,33,	0,2295,2651,2856,3086,4884,5055,
#Partially deleted in new
chr16	58503832	58507819	chr16:58503832-58507819	0	+	58503832	58507819	789624	8	71,121,63,61,87,57,101,12,	0,321,526,756,2554,2725,3082,3975,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	58505988	58513413	chr16:58505988-58513413	0	+	58505988	58505988	8553170	4	485,57,104,1313,	0,569,923,6112,
#Deleted in new
chr16	58506120	58507962	chr16:58506120-58507962	0	+	58506120	58506120	8553170	5	353,57,104,57,15,	0,437,791,1687,1827,
#Deleted in new
chr16	58506381	58511558	chr16:58506381-58511558	0	+	58506381	58511439	789624	8	92,57,104,57,52,48,36,137,	0,176,530,1426,1566,2580,2772,5040,
#Deleted in new
chr16	58506923	58511558	chr16:58506923-58511558	0	+	58506923	58506923	8553170	6	92,192,48,36,52,137,	0,884,2038,2230,2377,4498,
#Deleted in new
chr16	58506979	58511932	chr16:58506979-58511932	0	+	58506979	58511715	789624	2	36,425,	0,4528,
#Deleted in new
chr16	58507498	58509177	chr16:58507498-58509177	0	+	58507498	58507498	8553170	3	501,48,24,	0,1463,1655,
#Deleted in new
chr16	58507727	58509389	chr16:58507727-58509389	0	+	58507727	58507727	8553170	3	272,228,89,	0,1234,1573,
#Deleted in new
chr16	58509148	58513415	chr16:58509148-58513415	0	+	58509148	58509148	8553170	3	41,52,1994,	0,152,2273,
#Deleted in new
chr16	58510710	58513410	chr16:58510710-58513410	0	+	58510710	58510710	8553170	1	2700,	0,
#Partially deleted in new
chr16	58515478	58519662	chr16:58515478-58519662	3	+	58515537	58519029	0	9	86,90,145,142,195,121,181,143,939,	0,312,474,723,999,1329,2572,2922,3245,
#Partially deleted in new
chr16	58515481	58521181	chr16:58515481-58521181	1	+	58515537	58519029	789624	9	83,90,145,142,60,121,181,143,2458,	0,309,471,720,1131,1326,2569,2919,3242,
#Partially deleted in new
chr16	58515487	58519110	chr16:58515487-58519110	1	+	58515537	58519029	0	8	77,307,142,195,121,181,143,387,	0,303,714,990,1320,2563,2913,3236,
#Partially deleted in new
chr16	58515495	58519515	chr16:58515495-58519515	0	+	58515537	58518088	789624	9	69,90,145,142,195,121,212,143,792,	0,295,457,706,982,1312,2524,2905,3228,
#Deleted in new
chr16	58515499	58516494	chr16:58515499-58516494	0	+	58515499	58515499	8553170	4	65,90,145,293,	0,291,453,702,
#Deleted in new
chr16	58515511	58516527	chr16:58515511-58516527	0	+	58515511	58515511	8553170	4	369,145,142,50,	0,441,690,966,
#Partially deleted in new
chr16	58515512	58518872	chr16:58515512-58518872	0	+	58515537	58518872	789624	5	52,90,142,143,149,	0,278,689,2888,3211,
#Deleted in new
chr16	58515529	58516217	chr16:58515529-58516217	0	+	58515529	58515529	8553170	2	568,16,	0,672,
#Partially deleted in new
chr16	58515546	58518467	chr16:58515546-58518467	0	+	58515546	58515546	8553170	8	18,90,145,142,195,121,51,67,	0,244,406,655,931,1261,2634,2854,
#Partially deleted in new
chr16	58515790	58519503	chr16:58515790-58519503	0	+	58515790	58518207	789624	7	307,142,195,121,51,143,780,	0,411,687,1017,2390,2610,2933,
#Deleted in new
chr16	58516131	58517190	chr16:58516131-58517190	0	+	58516131	58516131	8553170	2	541,383,	0,676,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	58517466	58519076	chr16:58517466-58519076	0	+	58517466	58517466	8553170	3	765,143,353,	0,934,1257,
#Deleted in new
chr16	58518185	58518898	chr16:58518185-58518898	0	+	58518185	58518185	8553170	2	358,175,	0,538,
#Partially deleted in new
chr16	58519950	58629886	chr16:58519950-58629886	3	-	58520957	58599337	0	49	1086,135,133,181,150,174,102,118,164,249,232,170,109,143,192,120,105,141,297,131,178,78,111,117,180,141,231,79,287,125,147,202,151,152,123,120,241,128,171,111,127,169,204,55,69,99,108,276,159,	0,1232,3419,5228,6038,8524,10295,12007,12281,14196,17038,17940,18207,18821,19817,21550,22280,22477,23656,25410,26370,26721,27235,27615,29768,31181,31638,33831,35300,35833,36896,38522,40261,54658,55056,56512,58748,60682,61394,62842,63105,65387,66594,67250,67394,67829,68848,79285,109777,
#Partially deleted in new
chr16	58520683	58533165	chr16:58520683-58533165	0	-	58520683	58520683	8553170	9	353,135,133,181,150,174,102,118,934,	0,499,2686,4495,5305,7791,9562,11274,11548,
#Partially deleted in new
chr16	58520694	58629834	chr16:58520694-58629834	1	-	58520957	58599337	0	49	342,135,133,181,150,174,102,118,164,249,232,170,109,143,192,120,105,141,297,131,178,78,111,117,180,141,231,79,287,125,132,202,151,152,123,120,241,128,171,111,127,169,204,55,69,99,108,276,107,	0,488,2675,4484,5294,7780,9551,11263,11537,13452,16294,17196,17463,18077,19073,20806,21536,21733,22912,24666,25626,25977,26491,26871,29024,30437,30894,33087,34556,35089,36167,37778,39517,53914,54312,55768,58004,59938,60650,62098,62361,64643,65850,66506,66650,67085,68104,78541,109033,
#Boundary problem: need 50, got 0, diff 50, mapped 0.0
chr16	58520705	58629832	chr16:58520705-58629832	0	-	58528090	58599337	0	50	331,135,133,181,150,183,174,102,118,164,249,232,170,109,143,192,120,105,141,297,131,178,78,111,117,180,141,231,79,287,125,132,202,151,152,123,120,241,128,171,111,127,169,204,55,69,99,108,276,105,	0,477,2664,4473,5283,7217,7769,9540,11252,11526,13441,16283,17185,17452,18066,19062,20795,21525,21722,22901,24655,25615,25966,26480,26860,29013,30426,30883,33076,34545,35078,36156,37767,39506,53903,54301,55757,57993,59927,60639,62087,62350,64632,65839,66495,66639,67074,68093,78530,109022,
#Partially deleted in new
chr16	58521014	58525381	chr16:58521014-58525381	0	-	58521014	58521014	8553170	4	22,135,133,203,	0,168,2355,4164,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	58522969	58523842	chr16:58522969-58523842	3	+	58522969	58522969	8553170	1	873,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	58528613	58530668	chr16:58528613-58530668	0	-	58528613	58528613	8553170	2	35,423,	0,1632,
#Partially deleted in new
chr16	58531957	58539878	chr16:58531957-58539878	0	-	58531957	58539878	789624	8	118,164,249,253,170,109,143,111,	0,274,2189,5010,5933,6200,6814,7810,
#Partially deleted in new
chr16	58538157	58540066	chr16:58538157-58540066	0	-	58538157	58538157	8553170	3	109,143,299,	0,614,1610,
#Partially deleted in new
chr16	58542229	58543802	chr16:58542229-58543802	0	-	58543283	58543802	789624	4	106,141,124,196,	0,198,939,1377,
#Partially deleted in new
chr16	58543326	58629838	chr16:58543326-58629838	1	-	58543384	58599337	0	31	577,131,178,78,111,117,180,141,231,79,287,125,147,202,151,152,123,120,241,128,171,111,127,169,204,55,69,99,108,276,111,	0,2034,2994,3345,3859,4239,6392,7805,8262,10455,11924,12457,13520,15146,16885,31282,31680,33136,35372,37306,38018,39466,39729,42011,43218,43874,44018,44453,45472,55909,86401,
#Deleted in new
chr16	58543606	58546702	chr16:58543606-58546702	0	-	58543606	58546702	789624	4	297,131,94,31,	0,1754,2714,3065,
#Partially deleted in new
chr16	58546464	58551766	chr16:58546464-58551766	0	-	58546464	58551766	789624	6	34,78,111,180,141,178,	0,207,721,3254,4667,5124,
#Deleted in new
chr16	58548498	58548633	chr16:58548498-58548633	3	-	58548498	58548498	789624	1	135,	0,
#Partially deleted in new
chr16	58551602	58558617	chr16:58551602-58558617	0	-	58551602	58551602	8553170	5	217,287,125,132,145,	0,3648,4181,5259,6870,
#Partially deleted in new
chr16	58551789	58558490	chr16:58551789-58558490	0	-	58551789	58558490	789624	6	30,79,179,125,147,18,	0,1992,3461,3994,5057,6683,
#Partially deleted in new
chr16	58555783	58575063	chr16:58555783-58575063	0	-	58555783	58575063	789624	6	125,144,202,151,152,57,	0,1063,2689,4428,18825,19223,
#Deleted in new
chr16	58559795	58559929	chr16:58559795-58559929	3	-	58559795	58559795	8553170	1	134,	0,
#Deleted in new
chr16	58559795	58559931	chr16:58559795-58559931	3	-	58559795	58559795	5263520	1	136,	0,
#Partially deleted in new
chr16	58574716	58629832	chr16:58574716-58629832	0	-	58576464	58599337	789624	7	44,123,42,41,108,276,105,	0,290,1746,13121,14082,24519,55011,
#Partially deleted in new
chr16	58576464	58599337	chr16:58576464-58599337	1	-	58576464	58599337	789624	4	40,41,108,102,	0,11373,12334,22771,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	58588820	58629825	chr16:58588820-58629825	0	-	58588820	58599337	789624	4	86,276,122,98,	0,10415,35852,40907,
#Deleted in new
chr16	58597588	58597945	chr16:58597588-58597945	7	-	58597588	58597588	16724991	1	357,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	58599009	58629824	chr16:58599009-58629824	0	-	58599009	58599009	8553170	2	502,97,	0,30718,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	58599373	58629815	chr16:58599373-58629815	0	-	58599373	58599373	8553170	4	138,128,142,88,	0,23908,25279,30354,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	58623225	58629847	chr16:58623225-58629847	0	-	58623225	58623225	8553170	2	184,120,	0,6502,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	58665108	58685104	chr16:58665108-58685104	3	-	58667384	58680126	789624	12	2379,55,200,148,115,58,99,142,199,385,224,388,	0,5004,5936,6987,10831,11180,12217,13224,13587,14748,18846,19608,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	58665108	58684723	chr16:58665108-58684723	1	-	58667384	58680126	789624	11	2379,55,200,148,115,58,99,142,199,385,769,	0,5004,5936,6987,10831,11180,12217,13224,13587,14748,18846,
#Partially deleted in new
chr16	58666371	58684707	chr16:58666371-58684707	1	-	58667305	58680126	789624	8	1116,115,58,99,142,199,385,753,	0,9568,9917,10954,11961,12324,13485,17583,
#Partially deleted in new
chr16	58667277	58684181	chr16:58667277-58684181	0	-	58676007	58680126	789624	11	210,55,200,148,83,58,99,142,199,385,227,	0,2835,3767,4818,8662,9011,10048,11055,11418,12579,16677,
#Partially deleted in new
chr16	58667361	58684770	chr16:58667361-58684770	1	-	58667384	58679859	789624	12	126,55,200,148,115,58,99,142,199,17,224,54,	0,2751,3683,4734,8578,8927,9964,10971,11334,12495,16593,17355,
#Partially deleted in new
chr16	58667382	58684110	chr16:58667382-58684110	0	-	58667382	58667382	8553170	5	105,55,148,182,156,	0,2730,4713,8557,16572,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	58671571	58684743	chr16:58671571-58684743	0	-	58671571	58671571	8553170	9	672,115,58,99,142,199,385,224,27,	0,4368,4717,5754,6761,7124,8285,12383,13145,
#Partially deleted in new
chr16	58672029	58677577	chr16:58672029-58677577	0	-	58672029	58672029	8553170	3	214,407,252,	0,3910,5296,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	58672095	58678763	chr16:58672095-58678763	0	-	58675313	58678763	789624	7	148,130,115,58,99,142,68,	0,3117,3844,4193,5230,6237,6600,
#Partially deleted in new
chr16	58675943	58684770	chr16:58675943-58684770	0	-	58675943	58677351	789624	5	111,58,99,224,54,	0,345,1382,8011,8773,
#Partially deleted in new
chr16	58678742	58684743	chr16:58678742-58684743	0	-	58678742	58680126	789624	3	152,385,27,	0,1114,5974,
#Partially deleted in new
chr16	58678880	58684770	chr16:58678880-58684770	0	-	58678880	58680126	789624	4	14,385,129,54,	0,976,5074,5836,
#Partially deleted in new
chr16	58679609	58684053	chr16:58679609-58684053	1	-	58679718	58680126	789624	2	632,99,	0,4345,
#Partially deleted in new
chr16	58681387	58684770	chr16:58681387-58684770	0	-	58681387	58681387	8553170	3	484,43,54,	0,2748,3329,
#Partially deleted in new
chr16	58681515	58684323	chr16:58681515-58684323	0	-	58681515	58681515	8553170	2	193,369,	0,2439,
#Partially deleted in new
chr16	58683665	58684770	chr16:58683665-58684770	0	-	58683665	58683665	8553170	2	513,54,	0,1051,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	58705798	58706297	chr16:58705798-58706297	3	-	58705798	58705798	8553170	1	499,	0,
#Partially deleted in new
chr16	58707130	58734357	chr16:58707130-58734357	3	-	58708170	58734228	0	10	1163,151,166,151,105,162,60,129,157,218,	0,2286,8883,9532,11065,11396,12065,15019,16615,27009,
#Partially deleted in new
chr16	58707817	58734326	chr16:58707817-58734326	1	-	58708170	58734228	0	9	476,151,166,151,105,162,60,157,187,	0,1599,8196,8845,10378,10709,11378,15928,26322,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	58709048	58716383	chr16:58709048-58716383	0	-	58709048	58709048	8553170	2	519,370,	0,6965,
#Partially deleted in new
chr16	58716012	58734342	chr16:58716012-58734342	0	-	58716012	58716012	8553170	7	167,105,162,60,129,157,203,	0,2183,2514,3183,6137,7733,18127,
#Partially deleted in new
chr16	58718216	58734302	chr16:58718216-58734302	0	-	58718216	58718216	8553170	5	472,60,129,157,163,	0,979,3933,5529,15923,
#Partially deleted in new
chr16	58718569	58734316	chr16:58718569-58734316	0	-	58722187	58734228	789624	4	119,60,160,177,	0,626,3549,15570,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	58721644	58734335	chr16:58721644-58734335	0	-	58721644	58721644	8553170	3	634,157,196,	0,2101,12495,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	58733911	58862170	chr16:58733911-58862170	0	+	58733911	58733911	8553170	4	71,162,203,136,	0,241,22064,128123,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	58744250	58744357	chr16:58744250-58744357	3	-	58744250	58744250	8553170	1	107,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	58749637	59108974	chr16:58749637-59108974	3	+	58749637	58749637	8553170	4	476,203,70,1547,	0,6338,314544,357790,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	58749676	58862081	chr16:58749676-58862081	0	+	58749676	58749676	8553170	2	437,47,	0,112358,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	58770523	58770820	chr16:58770523-58770820	3	+	58770523	58770523	8553170	1	297,	0,
#Partially deleted in new
chr16	58776539	58777563	chr16:58776539-58777563	7	+	58776539	58776539	16724991	2	156,544,	0,480,
#Deleted in new
chr16	58825890	58826368	chr16:58825890-58826368	7	+	58825890	58825890	16724991	1	478,	0,
#Partially deleted in new
chr16	58847806	58880036	chr16:58847806-58880036	0	-	58847806	58847806	8553170	2	347,158,	0,32072,
#Partially deleted in new
chr16	58847807	58880213	chr16:58847807-58880213	3	-	58847807	58847807	8553170	3	346,53,46,	0,32177,32360,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	59004212	59004494	chr16:59004212-59004494	3	+	59004212	59004212	8553170	1	282,	0,
#Deleted in new
chr16	59088836	59089091	chr16:59088836-59089091	7	+	59088836	59088836	16724991	1	255,	0,
#Deleted in new
chr16	59166950	59167152	chr16:59166950-59167152	7	-	59166950	59166950	16724991	1	202,	0,
#Partially deleted in new
chr16	59655601	59656336	chr16:59655601-59656336	7	+	59655601	59655601	16724991	2	319,207,	0,528,
#Partially deleted in new
chr16	59709992	59754848	chr16:59709992-59754848	7	-	59709992	59709992	16724991	4	131,80,135,64,	0,223,41968,44792,
#Deleted in new
chr16	59754460	59755026	chr16:59754460-59755026	5	-	59754460	59754460	16724991	1	566,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	59855352	60053973	chr16:59855352-60053973	3	+	59855352	59855352	789624	4	173,89,205,6119,	0,189358,190875,192502,
#Deleted in new
chr16	60024577	60025141	chr16:60024577-60025141	7	-	60024577	60024577	16724991	2	327,99,	0,465,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	60357213	60357474	chr16:60357213-60357474	7	+	60357213	60357213	16724991	1	261,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	60358454	60359480	chr16:60358454-60359480	3	-	60358454	60359480	789624	1	1026,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	60359841	60365643	chr16:60359841-60365643	1	+	60359841	60359841	8553170	3	62,116,622,	0,4975,5180,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	60360541	60442245	chr16:60360541-60442245	3	+	60360541	60360541	8553170	5	164,116,74,55,35,	0,4275,4480,80021,81669,
#Partially deleted in new
chr16	60654234	60656649	chr16:60654234-60656649	7	-	60654234	60654234	16724991	2	1736,244,	0,2171,
#Deleted in new
chr16	60925732	60928541	chr16:60925732-60928541	7	-	60925732	60925732	16724991	3	722,85,570,	0,1362,2239,
#Deleted in new
chr16	61055398	61055964	chr16:61055398-61055964	7	-	61055398	61055398	16724991	1	566,	0,
#Deleted in new
chr16	61055444	61055914	chr16:61055444-61055914	5	-	61055444	61055444	16724991	1	470,	0,
#Partially deleted in new
chr16	61647241	62036835	chr16:61647241-62036835	1	-	61647776	62021403	789624	13	647,220,252,118,122,137,254,188,168,120,295,451,756,	0,6640,8228,66599,79852,142104,170237,173684,177770,209877,253937,373910,388838,
#Partially deleted in new
chr16	61647241	62036835	chr16:61647241-62036835	3	-	61653607	62021403	789624	12	6860,252,118,122,137,254,188,168,120,295,451,756,	0,8228,66599,79852,142104,170237,173684,177770,209877,253937,373910,388838,
#Partially deleted in new
chr16	61647241	62021602	chr16:61647241-62021602	1	-	61652816	62021403	789624	12	5721,183,252,118,122,137,254,188,168,120,295,451,	0,6677,8228,66599,79852,142104,170237,173684,177770,209877,253937,373910,
#Partially deleted in new
chr16	61647241	62036312	chr16:61647241-62036312	0	-	61713941	62021403	789624	11	6860,252,118,137,254,188,168,120,295,451,233,	0,8228,66599,142104,170237,173684,177770,209877,253937,373910,388838,
#Partially deleted in new
chr16	61655559	61714058	chr16:61655559-61714058	0	-	61655559	61655559	8553170	2	162,218,	0,58281,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	61667178	61714284	chr16:61667178-61714284	0	-	61667178	61667178	8553170	3	553,118,107,	0,46662,46999,
#Deleted in new
chr16	61691755	61693750	chr16:61691755-61693750	3	-	61691755	61691755	8553170	1	1995,	0,
#Deleted in new
chr16	61710748	61714271	chr16:61710748-61714271	0	-	61710748	61710748	8553170	4	56,56,118,94,	0,847,3092,3429,
#Partially deleted in new
chr16	61725165	62036402	chr16:61725165-62036402	1	-	61727030	62021403	789624	9	2050,137,254,188,168,120,295,451,323,	0,64180,92313,95760,99846,131953,176013,295986,310914,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	61743153	61743476	chr16:61743153-61743476	3	-	61743153	61743153	8553170	1	323,	0,
#Partially deleted in new
chr16	61789475	61818043	chr16:61789475-61818043	0	-	61789475	61789475	8553170	2	7,565,	0,28003,
#Partially deleted in new
chr16	61817478	62035134	chr16:61817478-62035134	0	-	61817478	62021403	789624	7	254,188,168,120,295,451,52,	0,3447,7533,39640,83700,203673,217604,
#Partially deleted in new
chr16	61901129	62021379	chr16:61901129-62021379	0	-	61901129	61901129	8553170	2	344,228,	0,120022,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	61901391	61918714	chr16:61901391-61918714	0	-	61901391	61901391	8553170	2	82,457,	0,16866,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	61918320	61940697	chr16:61918320-61940697	3	+	61918320	61918320	8553170	4	79,112,67,456,	0,15791,19593,21921,
#Partially deleted in new
chr16	62021159	62037035	chr16:62021159-62037035	0	-	62021159	62021403	789624	2	443,116,	0,15760,
#Deleted in new
chr16	62031990	62036432	chr16:62031990-62036432	0	-	62031990	62031990	8553170	2	23,353,	0,4089,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	62187539	62187646	chr16:62187539-62187646	3	-	62187539	62187539	8553170	1	107,	0,
#Deleted in new
chr16	62342419	62342557	chr16:62342419-62342557	3	+	62342419	62342419	8553170	1	138,	0,
#Deleted in new
chr16	62357370	62357746	chr16:62357370-62357746	7	+	62357370	62357370	16724991	1	376,	0,
#Deleted in new
chr16	62596371	62598449	chr16:62596371-62598449	3	+	62596371	62596371	8553170	2	193,365,	0,1713,
#Deleted in new
chr16	62808221	62808706	chr16:62808221-62808706	7	-	62808221	62808221	16724991	1	485,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	63056785	63129654	chr16:63056785-63129654	3	-	63056785	63056785	8553170	5	1869,117,61,43,481,	0,3508,33476,62537,72388,
#Partially deleted in new
chr16	63057217	63059908	chr16:63057217-63059908	0	-	63057217	63057217	8553170	1	2691,	0,
#Partially deleted in new
chr16	63066525	63066990	chr16:63066525-63066990	3	-	63066525	63066525	8553170	1	465,	0,
#Deleted in new
chr16	63180609	63181071	chr16:63180609-63181071	7	-	63180609	63180609	16724991	1	462,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	63314263	63618046	chr16:63314263-63618046	3	-	63314263	63314263	8553170	4	59,68,80,354,	0,20336,216961,303429,
#Deleted in new
chr16	63350762	63351149	chr16:63350762-63351149	7	-	63350762	63350762	16724991	1	387,	0,
#Deleted in new
chr16	63368843	63369456	chr16:63368843-63369456	3	+	63368843	63368843	8553170	2	366,190,	0,423,
#Deleted in new
chr16	63397706	63397946	chr16:63397706-63397946	3	+	63397706	63397706	8553170	1	240,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	63531087	63618046	chr16:63531087-63618046	0	-	63531087	63531087	8553170	2	217,354,	0,86605,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	63531232	63618044	chr16:63531232-63618044	0	-	63531232	63531232	8553170	3	72,115,352,	0,1584,86460,
#Partially deleted in new
chr16	63703482	63703665	chr16:63703482-63703665	7	+	63703482	63703482	16724991	1	183,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	63935777	63936906	chr16:63935777-63936906	3	+	63935777	63935777	8553170	1	1129,	0,
#Deleted in new
chr16	64155168	64156574	chr16:64155168-64156574	3	+	64155168	64155168	8553170	1	1406,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	64242607	64343909	chr16:64242607-64343909	3	-	64242607	64242607	8553170	5	243,34,87,116,381,	0,3136,51472,74958,100921,
#Deleted in new
chr16	64260569	64261239	chr16:64260569-64261239	7	-	64260569	64260569	16724991	2	450,104,	0,566,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	64364780	64600247	chr16:64364780-64600247	3	+	64364780	64364780	8553170	5	116,127,111,85,109,	0,110908,114294,170211,235358,
#Deleted in new
chr16	64735924	64736804	chr16:64735924-64736804	7	+	64735924	64735924	16724991	2	69,387,	0,493,
#Deleted in new
chr16	64736793	64737283	chr16:64736793-64737283	5	+	64736793	64736793	16724991	1	490,	0,
#Deleted in new
chr16	64738322	64738564	chr16:64738322-64738564	7	+	64738322	64738322	16724991	1	242,	0,
#Partially deleted in new
chr16	64943752	65122198	chr16:64943752-65122198	3	-	64947602	65004869	789624	13	4347,252,118,134,137,254,188,168,120,295,400,125,319,	0,7014,27826,28178,29151,38295,44404,48015,49162,54809,60889,110051,178127,
#Partially deleted in new
chr16	64943752	65122036	chr16:64943752-65122036	1	-	64948090	65004869	789624	14	4347,179,252,118,134,137,254,188,168,120,295,400,125,157,	0,4856,7014,27826,28178,29151,38295,44404,48015,49162,54809,60889,110051,178127,
#Partially deleted in new
chr16	64947546	65121930	chr16:64947546-65121930	1	-	64947602	64998706	789624	12	553,252,118,134,137,254,188,168,120,295,125,51,	0,3220,24032,24384,25357,34501,40610,44221,45368,51015,106257,174333,
#Partially deleted in new
chr16	64968433	64972949	chr16:64968433-64972949	0	-	64968433	64968433	8553170	4	138,118,134,46,	0,3145,3497,4470,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	64981122	64983227	chr16:64981122-64983227	3	-	64981122	64981122	8553170	1	2105,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	64984695	64988334	chr16:64984695-64988334	0	-	64988147	64988334	789624	1	3639,	0,
#Partially deleted in new
chr16	64991342	64998629	chr16:64991342-64998629	0	-	64991342	64991342	8553170	3	593,120,68,	0,1572,7219,
#Partially deleted in new
chr16	64991912	65072260	chr16:64991912-65072260	0	-	64991912	65004869	789624	6	23,120,295,400,125,272,	0,1002,6649,12729,61891,80076,
#Partially deleted in new
chr16	65004641	65124292	chr16:65004641-65124292	0	-	65004641	65004641	8553170	3	400,125,59,	0,49162,119592,
#Partially deleted in new
chr16	65004659	65122065	chr16:65004659-65122065	0	-	65004659	65004869	789624	2	382,186,	0,117220,
#Partially deleted in new
chr16	65004672	65122365	chr16:65004672-65122365	0	-	65004672	65004869	789624	3	369,125,72,	0,49131,117621,
#Partially deleted in new
chr16	65004708	65059678	chr16:65004708-65059678	0	-	65004708	65004869	789624	3	333,125,155,	0,49095,54815,
#Partially deleted in new
chr16	65004765	65072213	chr16:65004765-65072213	0	-	65004765	65004869	789624	3	276,125,168,	0,49038,67280,
#Partially deleted in new
chr16	65004802	65122092	chr16:65004802-65122092	0	-	65004802	65004869	789624	3	239,125,218,	0,49001,117072,
#Partially deleted in new
chr16	65004852	65124286	chr16:65004852-65124286	0	-	65004852	65004852	8553170	4	189,125,147,53,	0,48951,118821,119381,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	65006861	65122046	chr16:65006861-65122046	0	-	65006861	65006861	8553170	3	250,125,167,	0,46942,115018,
#Partially deleted in new
chr16	65053803	65126112	chr16:65053803-65126112	0	-	65053803	65053803	8553170	2	125,343,	0,71966,
#Partially deleted in new
chr16	65053898	65124188	chr16:65053898-65124188	0	-	65053898	65053898	8553170	2	30,515,	0,69775,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	65094606	65122015	chr16:65094606-65122015	0	-	65094606	65094606	8553170	2	289,136,	0,27273,
#Deleted in new
chr16	65118800	65122057	chr16:65118800-65122057	0	-	65118800	65118800	8553170	2	361,178,	0,3079,
#Partially deleted in new
chr16	65141755	65176573	chr16:65141755-65176573	3	-	65141755	65141755	789624	4	344,154,133,119,	0,33410,34312,34699,
#Deleted in new
chr16	65176150	65176713	chr16:65176150-65176713	0	-	65176150	65176150	8553170	2	50,259,	0,304,
#Duplicated in new
chr16	65233055	65432820	chr16:65233055-65432820	3	+	65233055	65233055	8553170	5	125,146,89,213,208,	0,18668,138041,162927,199557,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	65284498	65576300	chr16:65284498-65576300	3	-	65284498	65284498	789624	9	941,134,59,59,81,123,146,155,62,	0,26915,69744,71932,78712,78882,79164,287272,291740,
#Partially deleted in new
chr16	65285023	65571789	chr16:65285023-65571789	0	-	65285023	65285023	8553170	6	416,59,81,123,146,19,	0,69219,78187,78357,78639,286747,
#Partially deleted in new
chr16	65580667	65646947	chr16:65580667-65646947	3	+	65580667	65580667	8553170	3	83,84,261,	0,43568,66019,
#Deleted in new
chr16	65601100	65601698	chr16:65601100-65601698	3	-	65601100	65601100	8553170	2	354,118,	0,480,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	65861111	65863784	chr16:65861111-65863784	3	-	65861111	65861111	8553170	1	2673,	0,
#Deleted in new
chr16	65938188	65938453	chr16:65938188-65938453	7	-	65938188	65938188	16724991	1	265,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	66301808	66301940	chr16:66301808-66301940	7	+	66301808	66301808	16724991	1	132,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	66366621	66404782	chr16:66366621-66404782	1	+	66379337	66403169	789624	10	137,229,289,117,165,188,171,106,246,2131,	0,12697,20187,21702,22736,23781,25514,31834,34149,36030,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	66366629	66404786	chr16:66366629-66404786	3	+	66379337	66403169	789624	12	129,229,289,117,165,188,248,143,125,106,246,2135,	0,12689,20179,21694,22728,23773,25506,29429,31352,31826,34141,36022,
#Partially deleted in new
chr16	66366689	66403408	chr16:66366689-66403408	0	+	66379337	66390498	789624	10	69,229,95,120,248,143,125,106,246,757,	0,12629,20119,23781,25446,29369,31292,31766,34081,35962,
#Partially deleted in new
chr16	66366714	66404767	chr16:66366714-66404767	1	+	66379337	66403169	8553170	13	44,110,229,289,117,165,188,248,143,125,106,246,2116,	0,1928,12604,20094,21609,22643,23688,25421,29344,31267,31741,34056,35937,
#Partially deleted in new
chr16	66376340	66386992	chr16:66376340-66386992	0	+	66379337	66386992	789624	3	202,229,184,	0,2978,10468,
#Partially deleted in new
chr16	66376389	66386827	chr16:66376389-66386827	0	+	66379337	66386827	789624	3	211,229,19,	0,2929,10419,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	66377208	66379389	chr16:66377208-66379389	0	+	66379337	66379389	789624	2	520,71,	0,2110,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	66379224	66392985	chr16:66379224-66392985	1	+	66379337	66392387	789624	6	323,289,117,165,188,850,	0,7584,9099,10133,11178,12911,
#Partially deleted in new
chr16	66395454	66403335	chr16:66395454-66403335	1	+	66400862	66403169	789624	6	368,143,125,106,246,684,	0,604,2527,3001,5316,7197,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	66408523	66412135	chr16:66408523-66412135	3	+	66408523	66408523	789624	2	291,1856,	0,1756,
#Partially deleted in new
chr16	66427296	66481916	chr16:66427296-66481916	1	+	66437676	66480925	789624	5	135,107,264,151,1331,	0,10298,42305,50263,53289,
#Partially deleted in new
chr16	66427336	66482842	chr16:66427336-66482842	0	+	66477597	66480925	789624	5	95,264,151,554,1405,	0,42265,50223,53249,54101,
#Partially deleted in new
chr16	66427370	66482269	chr16:66427370-66482269	1	+	66477597	66480925	789624	4	61,264,151,1684,	0,42231,50189,53215,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	66427739	66437803	chr16:66427739-66437803	0	+	66427739	66427739	8553170	2	759,204,	0,9860,
#Partially deleted in new
chr16	66428237	66438017	chr16:66428237-66438017	0	+	66437676	66438017	789624	2	14,423,	0,9357,
#Deleted in new
chr16	66450997	66451351	chr16:66450997-66451351	7	-	66450997	66450997	16724991	1	354,	0,
#Partially deleted in new
chr16	66469713	66493529	chr16:66469713-66493529	0	+	66469713	66469713	8553170	2	152,568,	0,23248,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	66469713	66485503	chr16:66469713-66485503	1	+	66477597	66482983	789624	3	152,151,2626,	0,7846,13164,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	66469795	66475867	chr16:66469795-66475867	1	-	66469795	66469795	8553170	2	267,266,	0,5806,
#Partially deleted in new
chr16	66469800	66476402	chr16:66469800-66476402	0	-	66469800	66469800	789624	3	262,77,139,	0,5801,6463,
#Partially deleted in new
chr16	66469811	66517312	chr16:66469811-66517312	0	-	66469811	66469811	8553170	4	251,77,81,177,	0,5790,43919,47324,
#Partially deleted in new
chr16	66469843	66517202	chr16:66469843-66517202	3	-	66481174	66517202	789624	6	219,77,174,83,81,67,	0,5758,8100,11320,43887,47292,
#Partially deleted in new
chr16	66469974	66481230	chr16:66469974-66481230	3	-	66469974	66469974	8553170	5	88,77,174,124,67,	0,5627,7969,9033,11189,
#Partially deleted in new
chr16	66477634	66493529	chr16:66477634-66493529	0	+	66477634	66493133	789624	2	76,568,	0,15327,
#Partially deleted in new
chr16	66485803	66493214	chr16:66485803-66493214	0	+	66485803	66485803	8553170	2	196,253,	0,7158,
#Partially deleted in new
chr16	66508002	66550412	chr16:66508002-66550412	3	-	66511967	66550061	789624	10	4064,81,80,89,74,90,54,75,32,475,	0,5728,9133,9786,20991,23377,28961,33876,40975,41935,
#Partially deleted in new
chr16	66508002	66513783	chr16:66508002-66513783	0	-	66508756	66513783	789624	2	769,53,	0,5728,
#Partially deleted in new
chr16	66508002	66550412	chr16:66508002-66550412	1	-	66511967	66550061	789624	9	4064,81,80,89,74,90,75,32,475,	0,5728,9133,9786,20991,23377,33876,40975,41935,
#Partially deleted in new
chr16	66509378	66550412	chr16:66509378-66550412	1	-	66511967	66550187	789624	10	2688,81,80,89,74,90,54,75,32,475,	0,4352,7757,8410,19615,22001,27585,32500,39599,40559,
#Partially deleted in new
chr16	66509378	66550115	chr16:66509378-66550115	1	-	66511967	66550061	789624	10	2688,81,80,89,74,90,54,75,32,178,	0,4352,7757,8410,19615,22001,27585,32500,39599,40559,
#Deleted in new
chr16	66509436	66510048	chr16:66509436-66510048	3	+	66509436	66509436	8553170	2	321,190,	0,422,
#Partially deleted in new
chr16	66510743	66550291	chr16:66510743-66550291	1	-	66511967	66550283	789624	10	1323,81,80,89,74,90,54,75,32,39,	0,2987,6392,7045,18250,20636,26220,31135,38234,39509,
#Partially deleted in new
chr16	66510743	66549798	chr16:66510743-66549798	1	-	66511967	66531463	789624	9	1323,81,80,89,74,90,54,75,821,	0,2987,6392,7045,18250,20636,26220,31135,38234,
#Deleted in new
chr16	66510745	66511252	chr16:66510745-66511252	0	-	66510745	66510745	8553170	2	332,90,	0,417,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	66510746	66550213	chr16:66510746-66550213	0	-	66547984	66550187	789624	11	1320,81,80,89,74,90,54,75,95,32,276,	0,2984,6389,7042,18247,20633,26217,31132,37224,38231,39191,
#Partially deleted in new
chr16	66511631	66550122	chr16:66511631-66550122	1	-	66511967	66550061	789624	9	435,81,80,89,74,90,54,32,185,	0,2099,5504,6157,17362,19748,25332,37346,38306,
#Partially deleted in new
chr16	66511683	66518142	chr16:66511683-66518142	0	-	66511683	66511683	8553170	4	383,81,80,354,	0,2047,5452,6105,
#Partially deleted in new
chr16	66511705	66550106	chr16:66511705-66550106	1	-	66511967	66550061	789624	10	361,132,80,89,74,90,54,75,32,169,	0,2025,5430,6083,17288,19674,25258,30173,37272,38232,
#Partially deleted in new
chr16	66511712	66549825	chr16:66511712-66549825	1	-	66511967	66531463	789624	10	354,81,80,89,74,90,54,75,32,249,	0,2018,5423,6076,17281,19667,25251,30166,37265,37864,
#Partially deleted in new
chr16	66511721	66517280	chr16:66511721-66517280	0	-	66511721	66511721	8553170	3	345,81,145,	0,2009,5414,
#Partially deleted in new
chr16	66511741	66550270	chr16:66511741-66550270	0	-	66512062	66550270	789624	8	325,81,74,90,54,75,32,18,	0,1989,17252,19638,25222,30137,37236,38511,
#Partially deleted in new
chr16	66511794	66550190	chr16:66511794-66550190	1	-	66511967	66550187	789624	9	272,81,80,89,74,90,75,32,253,	0,1936,5341,5994,17199,19585,30084,37183,38143,
#Partially deleted in new
chr16	66511953	66549860	chr16:66511953-66549860	1	-	66511967	66531463	789624	10	113,81,80,89,74,90,54,75,32,194,	0,1777,5182,5835,17040,19426,25010,29925,37024,37713,
#Partially deleted in new
chr16	66512002	66524961	chr16:66512002-66524961	0	-	66512002	66512002	8553170	5	64,81,80,89,104,	0,1728,5133,5786,12855,
#Partially deleted in new
chr16	66513747	66551734	chr16:66513747-66551734	0	-	66513747	66531463	789624	9	64,80,89,74,90,54,75,32,195,	0,3388,4041,15246,17632,23216,28131,35230,37792,
#Partially deleted in new
chr16	66517196	66552544	chr16:66517196-66552544	0	-	66517196	66531463	789624	8	19,89,74,90,54,75,32,120,	0,592,11797,14183,19767,24682,31781,35228,
#Partially deleted in new
chr16	66546556	66548883	chr16:66546556-66548883	0	-	66546556	66546556	8553170	2	94,215,	0,2112,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	66549279	66551189	chr16:66549279-66551189	3	+	66549279	66549279	8553170	1	1910,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	66550456	66550567	chr16:66550456-66550567	3	+	66550456	66550456	8553170	1	111,	0,
#Partially deleted in new
chr16	66552562	66566251	chr16:66552562-66566251	0	+	66552715	66563095	789624	3	231,146,169,	0,10509,13520,
#Partially deleted in new
chr16	66552566	66566072	chr16:66552566-66566072	3	+	66552715	66566011	789624	4	227,159,96,187,	0,5623,10555,13319,
#Partially deleted in new
chr16	66552568	66566072	chr16:66552568-66566072	1	+	66552715	66566011	789624	3	225,159,187,	0,5621,13317,
#Partially deleted in new
chr16	66552568	66566072	chr16:66552568-66566072	1	+	66552715	66566011	789624	3	225,96,187,	0,10553,13317,
#Partially deleted in new
chr16	66552568	66566072	chr16:66552568-66566072	1	+	66552715	66566011	789624	2	225,187,	0,13317,
#Partially deleted in new
chr16	66552572	66558532	chr16:66552572-66558532	0	+	66552572	66552572	8553170	2	221,343,	0,5617,
#Partially deleted in new
chr16	66552581	66566243	chr16:66552581-66566243	1	+	66552715	66566091	789624	4	212,159,96,161,	0,5608,10540,13501,
#Partially deleted in new
chr16	66552586	66570086	chr16:66552586-66570086	0	+	66552715	66563095	789624	3	207,146,151,	0,10485,17349,
#Partially deleted in new
chr16	66552612	66579135	chr16:66552612-66579135	3	+	66552715	66579001	789624	3	181,99,305,	0,24491,26218,
#Partially deleted in new
chr16	66552648	66566428	chr16:66552648-66566428	1	+	66552715	66566091	789624	3	145,96,346,	0,10473,13434,
#Partially deleted in new
chr16	66552678	66578931	chr16:66552678-66578931	1	+	66552715	66578852	789624	4	115,96,99,85,	0,10443,24425,26168,
#Partially deleted in new
chr16	66552678	66579135	chr16:66552678-66579135	1	+	66552715	66579001	789624	4	115,159,99,305,	0,5511,24425,26152,
#Partially deleted in new
chr16	66553394	66566069	chr16:66553394-66566069	0	+	66553394	66553394	8553170	3	85,96,184,	0,9727,12491,
#Partially deleted in new
chr16	66563127	66579135	chr16:66563127-66579135	0	+	66563127	66578852	789624	3	90,99,289,	0,13976,15719,
#Deleted in new
chr16	66565619	66566001	chr16:66565619-66566001	3	-	66565619	66565619	8553170	1	382,	0,
#Partially deleted in new
chr16	66566392	66579135	chr16:66566392-66579135	1	+	66566513	66579001	789624	3	220,99,305,	0,10711,12438,
#Partially deleted in new
chr16	66566392	66579135	chr16:66566392-66579135	0	+	66566513	66571172	789624	5	202,159,134,99,289,	0,3543,4744,10711,12454,
#Partially deleted in new
chr16	66566392	66579135	chr16:66566392-66579135	1	+	66566513	66579001	789624	3	202,99,305,	0,10711,12438,
#Partially deleted in new
chr16	66566392	66579135	chr16:66566392-66579135	1	+	66566513	66579001	789624	4	202,159,99,305,	0,3543,10711,12438,
#Partially deleted in new
chr16	66566392	66579135	chr16:66566392-66579135	1	+	66566513	66578852	789624	4	202,159,99,289,	0,3543,10711,12454,
#Partially deleted in new
chr16	66566392	66579135	chr16:66566392-66579135	2	+	66566513	66571186	789624	4	202,120,99,305,	0,4758,10711,12438,
#Partially deleted in new
chr16	66566392	66579135	chr16:66566392-66579135	0	+	66566513	66571186	789624	5	202,120,198,99,305,	0,4758,8547,10711,12438,
#Partially deleted in new
chr16	66566392	66579135	chr16:66566392-66579135	1	+	66577160	66579001	789624	3	202,74,305,	0,10736,12438,
#Partially deleted in new
chr16	66566392	66579135	chr16:66566392-66579135	1	+	66566513	66578852	789624	3	202,99,289,	0,10711,12454,
#Partially deleted in new
chr16	66566392	66579135	chr16:66566392-66579135	0	+	66566513	66577146	789624	3	202,74,289,	0,10736,12454,
#Partially deleted in new
chr16	66566392	66579137	chr16:66566392-66579137	1	+	66566513	66578852	789624	2	202,291,	0,12454,
#Partially deleted in new
chr16	66566392	66579135	chr16:66566392-66579135	0	+	66566513	66571172	789624	5	202,159,134,99,305,	0,3543,4744,10711,12438,
#Partially deleted in new
chr16	66566430	66579135	chr16:66566430-66579135	1	+	66566513	66579001	789624	3	530,99,305,	0,10673,12400,
#Partially deleted in new
chr16	66566446	66579137	chr16:66566446-66579137	1	+	66566513	66579001	789624	4	499,159,99,307,	0,3489,10657,12384,
#Partially deleted in new
chr16	66566513	66579137	chr16:66566513-66579137	1	+	66566513	66578852	789624	4	432,159,99,291,	0,3422,10590,12333,
#Partially deleted in new
chr16	66566746	66579135	chr16:66566746-66579135	0	+	66566746	66571172	789624	4	199,159,134,305,	0,3189,4390,12084,
#Partially deleted in new
chr16	66566746	66579135	chr16:66566746-66579135	0	+	66566746	66571172	789624	5	199,159,134,198,305,	0,3189,4390,8193,12084,
#Partially deleted in new
chr16	66566746	66579135	chr16:66566746-66579135	0	+	66566746	66571172	789624	5	199,159,134,198,289,	0,3189,4390,8193,12100,
#Partially deleted in new
chr16	66566746	66579135	chr16:66566746-66579135	0	+	66566746	66571172	789624	5	199,159,134,99,289,	0,3189,4390,10357,12100,
#Partially deleted in new
chr16	66566746	66579135	chr16:66566746-66579135	0	+	66566746	66571172	789624	4	199,159,134,289,	0,3189,4390,12100,
#Partially deleted in new
chr16	66579447	66588275	chr16:66579447-66588275	1	+	66579607	66588119	789624	3	445,102,357,	0,7549,8471,
#Partially deleted in new
chr16	66579456	66588275	chr16:66579456-66588275	3	+	66579607	66588119	789624	4	436,159,102,357,	0,569,7540,8462,
#Partially deleted in new
chr16	66579459	66587985	chr16:66579459-66587985	0	+	66579607	66587015	789624	4	239,46,102,67,	0,679,7537,8459,
#Deleted in new
chr16	66579982	66580716	chr16:66579982-66580716	3	-	66579982	66579982	8553170	2	263,292,	0,442,
#Partially deleted in new
chr16	66586908	66588275	chr16:66586908-66588275	0	+	66586908	66586908	8553170	2	190,357,	0,1010,
#Partially deleted in new
chr16	66603873	66609480	chr16:66603873-66609480	0	+	66604805	66609480	789624	4	36,222,156,46,	0,857,4435,5561,
#Partially deleted in new
chr16	66604031	66613892	chr16:66604031-66613892	3	+	66604805	66612637	789624	6	451,222,156,96,121,1284,	0,699,4277,5403,5851,8577,
#Partially deleted in new
chr16	66604099	66609498	chr16:66604099-66609498	0	+	66604805	66609498	789624	4	350,222,156,64,	0,631,4209,5335,
#Partially deleted in new
chr16	66604156	66612701	chr16:66604156-66612701	1	+	66604805	66612637	789624	6	26,222,156,96,121,93,	0,574,4152,5278,5726,8452,
#Partially deleted in new
chr16	66604275	66613892	chr16:66604275-66613892	1	+	66604805	66612637	789624	6	280,222,156,96,121,1284,	0,455,4033,5159,5607,8333,
#Partially deleted in new
chr16	66604309	66613892	chr16:66604309-66613892	1	+	66608419	66612637	789624	5	140,156,96,121,1284,	0,3999,5125,5573,8299,
#Partially deleted in new
chr16	66604340	66610060	chr16:66604340-66610060	1	+	66608419	66609857	789624	4	215,156,96,302,	0,3968,5094,5418,
#Partially deleted in new
chr16	66604663	66613880	chr16:66604663-66613880	1	+	66604805	66612637	789624	5	289,156,96,121,1272,	0,3645,4771,5219,7945,
#Partially deleted in new
chr16	66604731	66612934	chr16:66604731-66612934	1	+	66604805	66612637	789624	4	221,156,121,326,	0,3577,5151,7877,
#Partially deleted in new
chr16	66604731	66613478	chr16:66604731-66613478	1	+	66604805	66613117	789624	2	198,417,	0,8330,
#Partially deleted in new
chr16	66604740	66613849	chr16:66604740-66613849	0	+	66604805	66609857	789624	5	212,156,96,245,1241,	0,3568,4694,5018,7868,
#Partially deleted in new
chr16	66604894	66611061	chr16:66604894-66611061	1	+	66608419	66610878	789624	5	58,156,96,121,212,	0,3414,4540,4988,5955,
#Partially deleted in new
chr16	66605272	66612768	chr16:66605272-66612768	1	+	66608419	66612637	789624	5	154,156,96,121,160,	0,3036,4162,4610,7336,
#Partially deleted in new
chr16	66605520	66612760	chr16:66605520-66612760	1	+	66608419	66612637	789624	5	47,156,96,121,152,	0,2788,3914,4362,7088,
#Partially deleted in new
chr16	66609371	66613455	chr16:66609371-66613455	0	+	66609371	66609371	8553170	3	159,121,847,	0,511,3237,
#Partially deleted in new
chr16	66614749	66696707	chr16:66614749-66696707	1	-	66617276	66696525	789624	5	2609,161,99,177,368,	0,7312,8654,21655,81590,
#Deleted in new
chr16	66614749	66621775	chr16:66614749-66621775	0	-	66614749	66614749	8553170	1	7026,	0,
#Partially deleted in new
chr16	66616566	66636485	chr16:66616566-66636485	0	-	66617276	66636485	789624	5	149,128,161,99,81,	0,664,5495,6837,19838,
#Partially deleted in new
chr16	66621679	66696707	chr16:66621679-66696707	3	-	66622057	66696525	789624	4	543,99,177,368,	0,1724,14725,74660,
#Partially deleted in new
chr16	66621756	66696707	chr16:66621756-66696707	1	-	66622057	66696525	789624	4	466,99,177,281,	0,1647,14648,74670,
#Partially deleted in new
chr16	66720892	66751798	chr16:66720892-66751798	3	-	66723721	66751591	0	13	2930,117,118,42,60,112,136,94,170,231,117,74,314,	0,4935,6795,7308,8147,9219,11446,13325,15182,21545,28304,30380,30592,
#Partially deleted in new
chr16	66720896	66731785	chr16:66720896-66731785	3	+	66720896	66720896	8553170	2	1094,696,	0,10193,
#Partially deleted in new
chr16	66723477	66751601	chr16:66723477-66751601	1	-	66723721	66751591	0	12	345,117,118,42,60,112,136,94,170,117,74,117,	0,2350,4210,4723,5562,6634,8861,10740,12597,25719,27795,28007,
#Partially deleted in new
chr16	66723569	66729099	chr16:66723569-66729099	0	-	66723774	66729099	789624	3	253,42,60,	0,4631,5470,
#Partially deleted in new
chr16	66723584	66730219	chr16:66723584-66730219	0	-	66723721	66730219	789624	5	238,117,118,60,108,	0,2243,4103,5455,6527,
#Partially deleted in new
chr16	66723600	66728219	chr16:66723600-66728219	0	-	66724725	66728219	789624	5	222,87,117,118,19,	0,1061,2227,4087,4600,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	66723600	66733546	chr16:66723600-66733546	0	-	66723600	66723600	8553170	6	222,117,118,42,60,3435,	0,2227,4087,4600,5439,6511,
#Partially deleted in new
chr16	66723605	66730348	chr16:66723605-66730348	0	-	66723605	66723605	8553170	3	217,117,237,	0,2222,6506,
#Partially deleted in new
chr16	66725848	66732637	chr16:66725848-66732637	0	-	66725848	66725848	8553170	6	96,118,42,60,112,299,	0,1839,2352,3191,4263,6490,
#Partially deleted in new
chr16	66727996	66736197	chr16:66727996-66736197	0	-	66727996	66727996	8553170	6	246,60,112,109,94,123,	0,1043,2115,4342,6221,8078,
#Partially deleted in new
chr16	66729039	66731034	chr16:66729039-66731034	0	-	66729039	66729039	8553170	3	60,112,120,	0,1072,1875,
#Partially deleted in new
chr16	66732008	66751594	chr16:66732008-66751594	1	-	66732334	66751591	789624	6	466,94,170,231,74,110,	0,2209,4066,10429,19264,19476,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	66733972	66736237	chr16:66733972-66736237	0	-	66733972	66733972	8553170	2	339,163,	0,2102,
#Partially deleted in new
chr16	66736101	66751601	chr16:66736101-66751601	0	-	66736101	66751591	789624	5	143,117,117,74,117,	0,6336,13095,15171,15383,
#Partially deleted in new
chr16	66736167	66751601	chr16:66736167-66751601	0	-	66749280	66751591	789624	5	77,231,117,31,117,	0,6270,13029,15105,15317,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	66738237	66739722	chr16:66738237-66739722	3	+	66738237	66738237	8553170	2	140,950,	0,535,
#Partially deleted in new
chr16	66742450	66751601	chr16:66742450-66751601	0	-	66751370	66751591	789624	4	218,117,114,117,	0,6746,8822,9034,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	66751751	66754740	chr16:66751751-66754740	3	+	66751751	66751751	789624	2	1149,1745,	0,1244,
#Partially deleted in new
chr16	66754975	66801620	chr16:66754975-66801620	3	-	66754975	66796798	0	19	188,66,150,96,65,347,161,126,132,153,123,116,61,129,129,111,63,77,153,	0,3797,4165,12439,13128,14987,17613,20142,22227,23887,30810,31038,31249,33193,35619,35933,41792,46001,46492,
#Partially deleted in new
chr16	66754975	66801611	chr16:66754975-66801611	1	-	66754975	66796798	0	18	188,66,150,96,65,347,161,126,132,153,123,116,61,129,129,111,63,41,	0,3797,4165,12439,13128,14987,17613,20142,22227,23887,30810,31038,31249,33193,35619,35933,41792,46595,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	66758298	66801620	chr16:66758298-66801620	0	-	66767476	66796798	0	16	540,150,96,347,161,132,153,123,116,61,129,129,111,63,77,153,	0,842,9116,11664,14290,18904,20564,27487,27715,27926,29870,32296,32610,38469,42678,43169,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	66758303	66759208	chr16:66758303-66759208	0	-	66759132	66759208	789624	2	535,94,	0,811,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	66767427	66801026	chr16:66767427-66801026	0	-	66767427	66767427	8553170	15	83,347,161,126,132,153,123,116,61,129,129,111,63,149,50,	0,2535,5161,7690,9775,11435,18358,18586,18797,20741,23167,23481,29340,32620,33549,
#Partially deleted in new
chr16	66788238	66801584	chr16:66788238-66801584	0	-	66788238	66796798	789624	5	59,129,111,63,117,	0,2356,2670,8529,13229,
#Partially deleted in new
chr16	66802874	66830997	chr16:66802874-66830997	3	-	66803008	66830899	0	20	244,50,115,93,87,40,76,134,60,92,64,63,110,110,80,72,31,61,104,151,	0,2902,3037,5646,6114,7499,7822,10689,10912,13706,14090,14550,15653,18575,20352,20654,21980,23648,23802,27972,
#Partially deleted in new
chr16	66802874	66830976	chr16:66802874-66830976	1	-	66803008	66830899	0	20	244,50,115,93,87,40,76,134,60,92,64,63,110,110,80,72,31,61,113,130,	0,2902,3037,5646,6114,7499,7822,10689,10912,13706,14090,14550,15653,18575,20352,20654,21980,23648,23793,27972,
#Partially deleted in new
chr16	66802874	66808548	chr16:66802874-66808548	0	-	66803008	66808548	789624	4	244,86,115,28,	0,2902,3037,5646,
#Partially deleted in new
chr16	66802877	66810413	chr16:66802877-66810413	0	-	66803063	66810413	789624	5	241,115,93,87,40,	0,3034,5643,6111,7496,
#Partially deleted in new
chr16	66802879	66830976	chr16:66802879-66830976	1	-	66803008	66828014	0	21	239,50,115,93,87,40,76,134,60,92,64,63,110,110,80,72,31,61,104,98,130,	0,2897,3032,5641,6109,7494,7817,10684,10907,13701,14085,14545,15648,18570,20347,20649,21975,23643,23797,25100,27967,
#Partially deleted in new
chr16	66802879	66806069	chr16:66802879-66806069	0	-	66802879	66802879	8553170	2	239,293,	0,2897,
#Partially deleted in new
chr16	66802879	66806145	chr16:66802879-66806145	0	-	66802879	66802879	8553170	3	239,50,234,	0,2897,3032,
#Partially deleted in new
chr16	66802911	66830955	chr16:66802911-66830955	1	-	66803008	66823582	0	19	207,50,115,93,87,40,76,134,60,92,64,63,110,110,80,72,31,61,109,	0,2865,3000,5609,6077,7462,7785,10652,10875,13669,14053,14513,15616,18538,20315,20617,21943,23611,27935,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	66805629	66808694	chr16:66805629-66808694	0	-	66805629	66805629	8553170	2	397,174,	0,2891,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	66813128	66816716	chr16:66813128-66816716	0	-	66813128	66813128	8553170	3	569,60,136,	0,658,3452,
#Partially deleted in new
chr16	66816613	66830968	chr16:66816613-66830968	0	-	66826558	66830899	789624	8	874,110,110,80,72,31,61,122,	0,1914,4836,6613,6915,8241,9909,14233,
#Partially deleted in new
chr16	66816646	66830959	chr16:66816646-66830959	0	-	66823287	66830899	789624	7	26,64,63,110,110,80,113,	0,318,778,1881,4803,6580,14200,
#Partially deleted in new
chr16	66817433	66830973	chr16:66817433-66830973	0	-	66817433	66830899	789624	4	54,110,110,127,	0,1094,4016,13413,
#Partially deleted in new
chr16	66817469	66873256	chr16:66817469-66873256	0	-	66817469	66823582	789624	9	18,110,110,80,72,31,61,104,142,	0,1058,3980,5757,6059,7385,9053,9207,55645,
#Partially deleted in new
chr16	66818632	66830963	chr16:66818632-66830963	0	-	66818632	66818632	8553170	8	5,110,36,72,31,61,104,117,	0,2817,4594,4896,6222,7890,8044,12214,
#Partially deleted in new
chr16	66821445	66830977	chr16:66821445-66830977	0	-	66823560	66830899	789624	6	114,80,72,61,104,131,	0,1781,2083,5077,5231,9401,
#Partially deleted in new
chr16	66821455	66830917	chr16:66821455-66830917	0	-	66821455	66828014	789624	8	104,80,72,31,61,104,163,71,	0,1771,2073,3399,5067,5221,6524,9391,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	66823229	66830976	chr16:66823229-66830976	0	-	66823229	66830899	789624	7	77,72,31,61,104,105,130,	0,299,1625,3293,3447,4230,7617,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	66823280	66830976	chr16:66823280-66830976	0	-	66827935	66830899	789624	7	26,72,31,61,104,143,130,	0,248,1574,3242,3396,4654,7566,
#Partially deleted in new
chr16	66823341	66830976	chr16:66823341-66830976	0	-	66823341	66823341	8553170	5	259,31,61,104,130,	0,1513,3181,3335,7505,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	66824515	66830960	chr16:66824515-66830960	0	-	66824515	66824515	8553170	4	370,61,104,114,	0,2007,2161,6331,
#Partially deleted in new
chr16	66826098	66830976	chr16:66826098-66830976	0	-	66826098	66826098	8553170	3	485,104,130,	0,578,4748,
#Partially deleted in new
chr16	66841432	66853448	chr16:66841432-66853448	3	-	66841432	66841432	8553170	2	390,44,	0,11972,
#Partially deleted in new
chr16	66844378	66854149	chr16:66844378-66854149	3	+	66844487	66853498	0	7	149,198,119,96,63,156,774,	0,2651,6162,7084,7285,8333,8997,
#Partially deleted in new
chr16	66844931	66854153	chr16:66844931-66854153	1	+	66847157	66853498	0	7	303,198,119,96,63,156,778,	0,2098,5609,6531,6732,7780,8444,
#Partially deleted in new
chr16	66844931	66853720	chr16:66844931-66853720	0	+	66847157	66851527	789624	6	303,198,96,63,156,345,	0,2098,6531,6732,7780,8444,
#Partially deleted in new
chr16	66878588	66884739	chr16:66878588-66884739	0	+	66884284	66884739	789624	2	51,509,	0,5642,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	66880360	66891096	chr16:66880360-66891096	3	+	66884284	66885874	789624	2	280,6866,	0,3870,
#Partially deleted in new
chr16	66880514	66884749	chr16:66880514-66884749	0	+	66884284	66884749	789624	2	126,472,	0,3763,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	66880518	66884594	chr16:66880518-66884594	0	+	66884284	66884594	789624	3	122,88,364,	0,2496,3712,
#Partially deleted in new
chr16	66880530	66884366	chr16:66880530-66884366	0	+	66884284	66884366	789624	2	226,136,	0,3700,
#Partially deleted in new
chr16	66880606	66885011	chr16:66880606-66885011	0	+	66884284	66885011	789624	2	67,781,	0,3624,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	66888014	66889189	chr16:66888014-66889189	0	+	66888014	66888014	8553170	2	98,916,	0,259,
#Partially deleted in new
chr16	66908121	66918984	chr16:66908121-66918984	3	-	66908391	66918065	789624	18	368,117,108,243,134,242,189,77,228,151,123,197,159,139,156,84,58,181,	0,1145,1864,2138,3060,3777,4120,4382,4542,5009,5369,6094,7098,7943,8152,9520,9899,10682,
#Partially deleted in new
chr16	66908121	66918917	chr16:66908121-66918917	1	-	66908391	66918065	789624	18	368,117,108,177,134,242,189,77,228,151,123,197,159,139,156,84,58,114,	0,1145,1864,2138,3060,3777,4120,4382,4542,5009,5369,6094,7098,7943,8152,9520,9899,10682,
#Partially deleted in new
chr16	66908122	66918848	chr16:66908122-66918848	1	-	66908391	66918065	789624	17	367,117,108,243,134,242,189,77,228,151,123,123,81,156,84,58,45,	0,1144,1863,2137,3059,3776,4119,4381,4541,5008,5368,6093,8000,8151,9519,9898,10681,
#Partially deleted in new
chr16	66908123	66918876	chr16:66908123-66918876	1	-	66908391	66918065	789624	16	366,117,108,243,134,242,189,77,228,151,123,197,159,139,58,73,	0,1143,1862,2136,3058,3775,4118,4380,4540,5007,5367,6092,7096,7941,9897,10680,
#Partially deleted in new
chr16	66908128	66918848	chr16:66908128-66918848	1	-	66908391	66918065	789624	18	361,117,108,126,134,242,189,77,228,151,123,197,159,139,156,84,58,45,	0,1138,1857,2131,3053,3770,4113,4375,4535,5002,5362,6087,7091,7936,8145,9513,9892,10675,
#Partially deleted in new
chr16	66908128	66918884	chr16:66908128-66918884	0	-	66915297	66918065	789624	17	361,117,108,1056,242,189,77,228,151,123,187,182,139,156,84,58,81,	0,1138,1857,2131,3770,4113,4375,4535,5002,5362,6087,7091,7936,8145,9513,9892,10675,
#Partially deleted in new
chr16	66908132	66918852	chr16:66908132-66918852	0	-	66912257	66918065	789624	14	357,117,108,243,134,242,73,107,159,139,156,84,58,49,	0,1134,1853,2127,3049,3766,4109,6173,7087,7932,8141,9509,9888,10671,
#Partially deleted in new
chr16	66913184	66916396	chr16:66913184-66916396	0	-	66913184	66916396	789624	5	97,197,159,139,123,	0,1031,2035,2880,3089,
#Partially deleted in new
chr16	66915219	66918847	chr16:66915219-66918847	0	-	66915219	66916348	789624	5	159,139,156,84,44,	0,845,1054,2422,3584,
#Partially deleted in new
chr16	66921678	66925536	chr16:66921678-66925536	1	-	66922075	66925179	0	5	675,205,74,394,128,	0,1837,2167,3131,3730,
#Partially deleted in new
chr16	66921684	66925644	chr16:66921684-66925644	3	-	66922075	66925179	0	5	669,205,74,385,236,	0,1831,2161,3125,3724,
#Partially deleted in new
chr16	66921686	66923898	chr16:66921686-66923898	0	-	66921686	66921686	8553170	3	148,150,383,	0,517,1829,
#Partially deleted in new
chr16	66921749	66924974	chr16:66921749-66924974	0	-	66921749	66924974	789624	3	170,74,165,	0,2096,3060,
#Partially deleted in new
chr16	66921831	66924952	chr16:66921831-66924952	0	-	66921831	66924952	789624	4	159,108,74,143,	0,1781,2014,2978,
#Partially deleted in new
chr16	66932054	66934400	chr16:66932054-66934400	3	-	66932202	66934364	789624	5	246,46,126,80,178,	0,725,1559,1932,2168,
#Partially deleted in new
chr16	66932064	66934250	chr16:66932064-66934250	0	-	66932189	66934250	789624	6	137,29,46,126,80,28,	0,207,715,1549,1922,2158,
#Partially deleted in new
chr16	66932065	66934382	chr16:66932065-66934382	0	-	66934163	66934364	789624	5	235,46,126,180,126,	0,714,1548,1921,2191,
#Partially deleted in new
chr16	66932066	66934362	chr16:66932066-66934362	0	-	66932278	66934362	789624	6	234,70,46,126,80,140,	0,414,713,1547,1920,2156,
#Partially deleted in new
chr16	66932185	66934417	chr16:66932185-66934417	0	-	66932185	66932185	8553170	4	115,46,126,431,	0,594,1428,1801,
#Deleted in new
chr16	66933468	66934423	chr16:66933468-66934423	0	-	66933468	66933468	8553170	2	271,437,	0,518,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	66934443	66945069	chr16:66934443-66945069	1	+	66935443	66944025	789624	12	1268,205,142,134,259,99,141,81,145,90,73,1231,	0,3593,4773,5778,5993,6680,7062,7324,7661,8204,8855,9395,
#Partially deleted in new
chr16	66934455	66940534	chr16:66934455-66940534	0	+	66938239	66940534	789624	5	458,86,142,134,98,	0,3700,4761,5766,5981,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	66934459	66945096	chr16:66934459-66945096	3	+	66935443	66944025	789624	12	1252,205,142,134,259,99,141,81,145,138,73,1258,	0,3577,4757,5762,5977,6664,7046,7308,7645,8188,8839,9379,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	66934470	66944306	chr16:66934470-66944306	0	+	66935443	66935812	789624	12	1506,205,142,134,259,99,141,81,145,138,73,468,	0,3566,4746,5751,5966,6653,7035,7297,7634,8177,8828,9368,
#Deleted in new
chr16	66934474	66935508	chr16:66934474-66935508	0	+	66935443	66935508	789624	2	200,691,	0,343,
#Partially deleted in new
chr16	66935334	66938234	chr16:66935334-66938234	0	+	66935443	66935812	789624	2	541,198,	0,2702,
#Partially deleted in new
chr16	66935563	66938388	chr16:66935563-66938388	0	+	66935563	66935563	8553170	2	148,352,	0,2473,
#Deleted in new
chr16	66940591	66941756	chr16:66940591-66941756	0	+	66940591	66940591	8553170	3	104,99,251,	0,532,914,
#Deleted in new
chr16	66941151	66943632	chr16:66941151-66943632	0	+	66941151	66943375	789624	6	71,141,81,145,90,334,	0,354,616,953,1496,2147,
#Deleted in new
chr16	66941885	66942723	chr16:66941885-66942723	0	+	66941885	66941885	8553170	2	364,76,	0,762,
#Deleted in new
chr16	66941986	66943379	chr16:66941986-66943379	0	+	66941986	66941986	8553170	2	751,81,	0,1312,
#Deleted in new
chr16	66942571	66943970	chr16:66942571-66943970	0	+	66942571	66942571	8553170	3	166,73,132,	0,727,1267,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	66944659	66945096	chr16:66944659-66945096	3	-	66944659	66944659	8553170	1	437,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	66961236	66975096	chr16:66961236-66975096	3	+	66961307	66973049	789624	13	153,205,139,134,154,105,102,141,81,148,150,79,2243,	0,1942,2254,2565,3120,3386,5007,5488,8442,9935,11119,11431,11617,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	66961244	66975096	chr16:66961244-66975096	1	+	66961307	66973049	789624	13	145,205,139,134,154,105,102,141,81,148,150,70,2243,	0,1934,2246,2557,3112,3378,4999,5480,8434,9927,11111,11432,11609,
#Partially deleted in new
chr16	66961257	66964726	chr16:66961257-66964726	0	+	66961307	66963200	789624	7	132,19,205,139,134,154,104,	0,1808,1921,2233,2544,3099,3365,
#Partially deleted in new
chr16	66961265	66963748	chr16:66961265-66963748	0	+	66961265	66961265	8553170	3	124,205,258,	0,1913,2225,
#Partially deleted in new
chr16	66961289	66963612	chr16:66961289-66963612	0	+	66961289	66961289	8553170	2	100,434,	0,1889,
#Partially deleted in new
chr16	66961302	66973383	chr16:66961302-66973383	0	+	66961307	66972433	789624	11	87,205,139,134,154,105,102,141,150,79,530,	0,1876,2188,2499,3054,3320,4941,5422,11053,11365,11551,
#Partially deleted in new
chr16	66964432	66966764	chr16:66964432-66966764	0	+	66964432	66964432	8553170	3	78,105,521,	0,190,1811,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	66967474	66975148	chr16:66967474-66975148	1	+	66969699	66973049	789624	6	425,81,148,150,79,2295,	0,2204,3697,4881,5193,5379,
#Partially deleted in new
chr16	66988588	67009758	chr16:66988588-67009758	1	+	66988772	67009065	789624	12	242,202,142,134,154,105,105,39,141,81,154,785,	0,7039,12049,12268,12719,14481,14667,14926,15495,16204,16651,20385,
#Partially deleted in new
chr16	66988593	67009753	chr16:66988593-67009753	3	+	66988703	67009142	8553170	14	237,202,142,134,154,105,105,39,141,81,154,129,73,780,	0,7034,12044,12263,12714,14476,14662,14921,15490,16199,16646,17797,18151,20380,
#Partially deleted in new
chr16	66995680	67009735	chr16:66995680-67009735	0	+	66995680	67009142	789624	11	149,142,134,154,105,105,39,141,154,73,762,	0,4957,5176,5627,7389,7575,7834,8403,9559,11064,13293,
#Partially deleted in new
chr16	67000551	67009752	chr16:67000551-67009752	0	+	67000671	67001417	789624	12	228,190,154,105,105,39,141,81,154,129,73,779,	0,305,756,2518,2704,2963,3532,4241,4688,5839,6193,8422,
#Partially deleted in new
chr16	67000552	67009456	chr16:67000552-67009456	1	+	67000671	67009142	789624	12	227,134,154,105,105,39,141,81,154,129,73,483,	0,304,755,2517,2703,2962,3531,4240,4687,5838,6192,8421,
#Partially deleted in new
chr16	67000573	67009314	chr16:67000573-67009314	1	+	67000671	67009065	789624	10	206,146,154,105,105,39,141,81,154,341,	0,283,734,2496,2682,2941,3510,4219,4666,8400,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	67000600	67009735	chr16:67000600-67009735	0	+	67000600	67000600	8553170	10	179,134,154,105,105,39,141,1727,73,762,	0,256,707,2469,2655,2914,3483,4192,6144,8373,
#Partially deleted in new
chr16	67004821	67006695	chr16:67004821-67006695	0	+	67004821	67004821	8553170	2	572,305,	0,1569,
#Partially deleted in new
chr16	67004958	67009758	chr16:67004958-67009758	0	+	67004958	67004958	8553170	2	435,785,	0,4015,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	67005558	67009739	chr16:67005558-67009739	0	+	67005558	67005558	8553170	3	57,129,766,	0,832,3415,
#Partially deleted in new
chr16	67006522	67009418	chr16:67006522-67009418	0	+	67006522	67006522	8553170	2	295,445,	0,2451,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	67006671	67009481	chr16:67006671-67009481	3	-	67006671	67006671	8553170	1	2810,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	67019518	67019817	chr16:67019518-67019817	3	+	67019518	67019518	8553170	1	299,	0,
#Partially deleted in new
chr16	67029115	67098811	chr16:67029115-67098811	1	+	67066699	67098732	789624	6	34,87,117,117,127,102,	0,611,7523,37566,53097,69594,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	67029146	67101058	chr16:67029146-67101058	3	+	67029407	67098732	0	6	339,87,117,117,127,2349,	0,580,7492,37535,53066,69563,
#Partially deleted in new
chr16	67029178	67066796	chr16:67029178-67066796	0	+	67029407	67066796	789624	3	307,87,115,	0,548,37503,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	67029244	67101022	chr16:67029244-67101022	1	+	67029407	67098778	0	6	241,87,117,117,96,2313,	0,482,7394,37437,52968,69465,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	67029460	67099443	chr16:67029460-67099443	0	+	67029460	67098778	789624	3	25,87,734,	0,266,69249,
#Partially deleted in new
chr16	67029951	67082297	chr16:67029951-67082297	0	+	67066699	67082297	789624	4	226,117,117,85,	0,6687,36730,52261,
#Partially deleted in new
chr16	67036426	67066962	chr16:67036426-67066962	0	+	67036426	67036426	8553170	2	329,281,	0,30255,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	67082084	67098969	chr16:67082084-67098969	0	+	67082084	67082084	8553170	2	224,260,	0,16625,
#Partially deleted in new
chr16	67093397	67099391	chr16:67093397-67099391	0	+	67093397	67093397	8553170	2	232,682,	0,5312,
#Partially deleted in new
chr16	67109957	67144376	chr16:67109957-67144376	0	+	67110175	67144376	789624	12	32,95,83,84,44,80,95,98,113,134,84,83,	0,187,10154,16001,21328,22488,22859,24210,24397,30026,30553,34336,
#Partially deleted in new
chr16	67109961	67140074	chr16:67109961-67140074	0	+	67110175	67140074	789624	9	43,121,83,44,80,95,98,113,91,	0,157,10150,21324,22484,22855,24206,24393,30022,
#Partially deleted in new
chr16	67109962	67147131	chr16:67109962-67147131	1	+	67110175	67147131	789624	17	27,121,83,84,44,80,95,98,113,134,84,83,44,44,59,73,87,	0,156,10149,15996,21323,22483,22854,24205,24392,30021,30548,34331,34871,35413,35607,36315,37082,
#Partially deleted in new
chr16	67109987	67148539	chr16:67109987-67148539	3	+	67110175	67147131	789624	16	252,83,84,44,80,95,98,113,134,84,83,44,44,59,73,1495,	0,10124,15971,21298,22458,22829,24180,24367,29996,30523,34306,34846,35388,35582,36290,37057,
#Partially deleted in new
chr16	67110146	67134386	chr16:67110146-67134386	0	+	67110175	67134386	789624	7	93,83,44,80,95,98,32,	0,9965,21139,22299,22670,24021,24208,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	67120094	67136308	chr16:67120094-67136308	0	+	67120094	67120094	8553170	5	100,84,44,466,2141,	0,5864,11191,12351,14073,
#Deleted in new
chr16	67131988	67132934	chr16:67131988-67132934	0	+	67131988	67131988	8553170	2	537,118,	0,828,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	67134771	67136310	chr16:67134771-67136310	0	+	67134771	67134771	8553170	2	421,55,	0,1484,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	67139633	67144877	chr16:67139633-67144877	0	+	67139633	67139633	8553170	4	484,84,83,44,	0,877,4660,5200,
#Deleted in new
chr16	67146283	67147707	chr16:67146283-67147707	0	+	67146283	67147483	789624	3	67,50,402,	0,761,1022,
#Deleted in new
chr16	67148104	67151214	chr16:67148104-67151214	3	-	67149276	67150485	789624	2	2567,350,	0,2760,
#Partially deleted in new
chr16	67154179	67160298	chr16:67154179-67160298	3	-	67154648	67156660	0	5	780,199,278,159,461,	0,916,1197,2330,5658,
#Deleted in new
chr16	67154198	67156249	chr16:67154198-67156249	1	-	67154648	67155625	0	3	761,199,873,	0,897,1178,
#Deleted in new
chr16	67154832	67155418	chr16:67154832-67155418	0	-	67154832	67154832	8553170	2	127,323,	0,263,
#Deleted in new
chr16	67155538	67156681	chr16:67155538-67156681	0	-	67155538	67155538	8553170	2	661,172,	0,971,
#Partially deleted in new
chr16	67155750	67159898	chr16:67155750-67159898	0	-	67155750	67155750	8553170	3	449,159,61,	0,759,4087,
#Partially deleted in new
chr16	67159930	67164176	chr16:67159930-67164176	3	+	67161785	67163820	789624	3	126,203,1329,	0,1804,2917,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	67159931	67162663	chr16:67159931-67162663	1	+	67161785	67161941	789624	2	125,929,	0,1803,
#Partially deleted in new
chr16	67159948	67164065	chr16:67159948-67164065	0	+	67161785	67163563	789624	4	108,203,341,47,	0,1786,3563,4070,
#Partially deleted in new
chr16	67159960	67164174	chr16:67159960-67164174	1	+	67161785	67163820	789624	4	96,203,1005,156,	0,1774,2887,4058,
#Partially deleted in new
chr16	67159972	67164570	chr16:67159972-67164570	0	+	67161785	67164570	789624	4	84,203,126,130,	0,1762,4046,4468,
#Partially deleted in new
chr16	67160004	67162954	chr16:67160004-67162954	1	+	67161785	67162672	789624	3	52,203,319,	0,1730,2631,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	67161119	67163081	chr16:67161119-67163081	0	+	67161785	67163081	789624	3	122,203,234,	0,615,1728,
#Partially deleted in new
chr16	67161688	67163184	chr16:67161688-67163184	0	+	67161785	67163184	789624	2	249,337,	0,1159,
#Deleted in new
chr16	67163384	67165808	chr16:67163384-67165808	2	+	67163384	67163820	789624	5	468,126,494,109,90,	0,634,1056,2137,2334,
#Deleted in new
chr16	67163683	67165815	chr16:67163683-67165815	0	+	67163683	67163820	789624	4	169,126,109,97,	0,335,1838,2035,
#Deleted in new
chr16	67163707	67165642	chr16:67163707-67165642	1	+	67163707	67163820	789624	3	145,126,1202,	0,311,733,
#Deleted in new
chr16	67163805	67164461	chr16:67163805-67164461	0	+	67163805	67163805	8553170	2	47,443,	0,213,
#Deleted in new
chr16	67164140	67164819	chr16:67164140-67164819	0	+	67164140	67164140	8553170	2	120,379,	0,300,
#Partially deleted in new
chr16	67164680	67168883	chr16:67164680-67168883	0	+	67164680	67164680	8553170	9	254,325,450,65,103,100,125,124,53,	0,841,1265,1877,2439,2622,2794,3143,4150,
#Partially deleted in new
chr16	67164742	67169939	chr16:67164742-67169939	0	+	67164811	67167137	789624	13	192,109,128,66,76,65,103,125,124,106,66,70,309,	0,779,976,1203,1577,1815,2377,2732,3081,4088,4293,4536,4888,
#Partially deleted in new
chr16	67164743	67169910	chr16:67164743-67169910	0	+	67164811	67167917	789624	13	191,109,128,125,76,65,103,125,124,106,66,70,280,	0,778,975,1202,1576,1814,2376,2731,3080,4087,4292,4535,4887,
#Deleted in new
chr16	67164744	67166154	chr16:67164744-67166154	0	+	67164744	67164744	8553170	4	190,109,128,209,	0,777,974,1201,
#Partially deleted in new
chr16	67164770	67169929	chr16:67164770-67169929	0	+	67164811	67165739	789624	12	164,128,125,76,65,103,125,228,106,66,70,299,	0,948,1175,1549,1787,2349,2704,2949,4060,4265,4508,4860,
#Partially deleted in new
chr16	67164789	67169941	chr16:67164789-67169941	0	+	67164811	67168934	789624	11	145,109,128,125,76,65,103,124,106,66,311,	0,732,929,1156,1530,1768,2330,3034,4041,4246,4841,
#Partially deleted in new
chr16	67164789	67169945	chr16:67164789-67169945	0	+	67164811	67167917	789624	12	145,109,128,125,76,65,103,125,124,106,66,667,	0,732,929,1156,1530,1768,2330,2685,3034,4041,4246,4489,
#Partially deleted in new
chr16	67164811	67169783	chr16:67164811-67169783	0	+	67164811	67169783	789624	12	123,109,128,125,76,65,103,125,106,66,70,153,	0,710,907,1134,1508,1746,2308,2663,4019,4224,4467,4819,
#Partially deleted in new
chr16	67164811	67169821	chr16:67164811-67169821	3	+	67164811	67169785	789624	13	123,109,128,125,76,65,103,125,228,106,66,70,191,	0,710,907,1134,1508,1746,2308,2663,2908,4019,4224,4467,4819,
#Partially deleted in new
chr16	67164811	67169945	chr16:67164811-67169945	1	+	67164811	67169785	789624	13	123,109,128,125,76,65,103,139,124,106,66,70,315,	0,710,907,1134,1508,1746,2308,2649,3012,4019,4224,4467,4819,
#Deleted in new
chr16	67164899	67165815	chr16:67164899-67165815	0	+	67164899	67164899	8553170	2	731,97,	0,819,
#Deleted in new
chr16	67165524	67167490	chr16:67165524-67167490	0	+	67165524	67167490	789624	7	106,128,66,72,65,103,16,	0,194,421,799,1033,1595,1950,
#Deleted in new
chr16	67165838	67167917	chr16:67165838-67167917	0	+	67165838	67167137	789624	8	8,66,76,65,103,100,125,94,	0,107,481,719,1281,1464,1636,1985,
#Partially deleted in new
chr16	67166046	67169040	chr16:67166046-67169040	0	+	67166046	67169040	789624	8	24,76,65,21,125,124,106,5,	0,273,511,1155,1428,1777,2784,2989,
#Deleted in new
chr16	67166184	67167479	chr16:67166184-67167479	0	+	67166184	67166184	8553170	4	211,35,103,19,	0,403,935,1276,
#Deleted in new
chr16	67166256	67167543	chr16:67166256-67167543	0	+	67166256	67166256	8553170	5	139,65,103,100,40,	0,301,863,1046,1247,
#Deleted in new
chr16	67166275	67167292	chr16:67166275-67167292	0	+	67166275	67166275	8553170	3	120,65,173,	0,282,844,
#Deleted in new
chr16	67166310	67167222	chr16:67166310-67167222	0	+	67166310	67166310	8553170	3	59,65,103,	0,247,809,
#Deleted in new
chr16	67166332	67167381	chr16:67166332-67167381	0	+	67166332	67166332	8553170	4	63,65,107,79,	0,225,787,970,
#Partially deleted in new
chr16	67167170	67169781	chr16:67167170-67169781	0	+	67167170	67169781	789624	7	52,100,124,106,66,70,151,	0,132,653,1660,1865,2108,2460,
#Partially deleted in new
chr16	67167187	67169710	chr16:67167187-67169710	0	+	67167187	67167187	8553170	5	35,125,124,106,675,	0,287,636,1643,1848,
#Partially deleted in new
chr16	67167379	67169903	chr16:67167379-67169903	0	+	67167379	67167503	789624	6	23,125,124,106,66,273,	0,95,444,1451,1656,2251,
#Deleted in new
chr16	67167420	67167804	chr16:67167420-67167804	0	+	67167420	67167420	8553170	2	179,85,	0,299,
#Partially deleted in new
chr16	67167838	67169941	chr16:67167838-67169941	0	+	67167838	67169801	789624	5	109,106,66,70,214,	0,992,1197,1440,1889,
#Deleted in new
chr16	67169073	67169941	chr16:67169073-67169941	0	+	67169073	67169727	789624	3	28,70,306,	0,205,562,
#Partially deleted in new
chr16	67170153	67174848	chr16:67170153-67174848	0	+	67174169	67174848	789624	3	48,303,228,	0,4008,4467,
#Partially deleted in new
chr16	67170496	67175735	chr16:67170496-67175735	3	+	67174169	67175054	0	4	78,303,324,689,	0,3665,4124,4550,
#Partially deleted in new
chr16	67170496	67174741	chr16:67170496-67174741	0	+	67174169	67174741	789624	5	78,101,39,303,121,	0,655,3511,3665,4124,
#Deleted in new
chr16	67170501	67171656	chr16:67170501-67171656	0	+	67170501	67170501	8553170	2	73,505,	0,650,
#Partially deleted in new
chr16	67170524	67174944	chr16:67170524-67174944	0	+	67174169	67174944	789624	3	50,303,324,	0,3637,4096,
#Partially deleted in new
chr16	67170539	67175485	chr16:67170539-67175485	1	+	67173868	67175054	0	6	35,306,185,303,324,439,	0,612,3322,3622,4081,4507,
#Partially deleted in new
chr16	67170541	67173929	chr16:67170541-67173929	0	+	67170541	67170541	8553170	3	33,306,180,	0,610,3208,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	67171633	67173003	chr16:67171633-67173003	0	+	67171633	67171633	8553170	2	369,244,	0,1126,
#Partially deleted in new
chr16	67173950	67175199	chr16:67173950-67175199	0	+	67173950	67175097	789624	4	96,179,324,153,	0,211,670,1096,
#Partially deleted in new
chr16	67173953	67175681	chr16:67173953-67175681	0	+	67173953	67173953	8553170	3	93,783,635,	0,208,1093,
#Partially deleted in new
chr16	67173983	67175453	chr16:67173983-67175453	0	+	67173983	67175054	789624	3	63,324,407,	0,637,1063,
#Partially deleted in new
chr16	67174001	67175735	chr16:67174001-67175735	1	+	67174169	67175097	0	4	45,293,324,689,	0,160,619,1045,
#Partially deleted in new
chr16	67174843	67175260	chr16:67174843-67175260	0	+	67174843	67175260	789624	2	103,214,	0,203,
#Partially deleted in new
chr16	67175601	67176455	chr16:67175601-67176455	0	-	67175601	67175601	8553170	2	242,270,	0,584,
#Partially deleted in new
chr16	67175603	67184040	chr16:67175603-67184040	3	-	67176810	67180610	789624	8	1372,98,306,133,144,626,92,779,	0,2406,2595,3826,4211,4437,6002,7658,
#Partially deleted in new
chr16	67175603	67183952	chr16:67175603-67183952	1	-	67178023	67180610	789624	8	1372,88,306,133,144,626,140,691,	0,2406,2595,3826,4211,4437,5954,7658,
#Partially deleted in new
chr16	67175603	67179552	chr16:67175603-67179552	0	-	67175603	67175603	8553170	3	1372,98,1354,	0,2406,2595,
#Partially deleted in new
chr16	67175603	67180062	chr16:67175603-67180062	0	-	67176964	67180062	789624	5	1372,306,133,144,22,	0,2595,3826,4211,4437,
#Partially deleted in new
chr16	67176649	67179328	chr16:67176649-67179328	0	-	67176649	67176649	8553170	4	326,98,306,68,	0,1360,1549,2611,
#Partially deleted in new
chr16	67176729	67183941	chr16:67176729-67183941	1	-	67176810	67180610	789624	7	246,98,306,133,144,626,680,	0,1280,1469,2700,3085,3311,6532,
#Partially deleted in new
chr16	67176770	67183586	chr16:67176770-67183586	0	-	67176770	67176770	8553170	3	205,306,325,	0,1428,6491,
#Partially deleted in new
chr16	67178444	67180355	chr16:67178444-67180355	0	-	67178444	67178444	8553170	4	60,161,144,315,	0,957,1370,1596,
#Partially deleted in new
chr16	67179117	67179961	chr16:67179117-67179961	0	-	67179117	67179117	8553170	2	445,147,	0,697,
#Partially deleted in new
chr16	67179429	67183962	chr16:67179429-67183962	0	-	67179429	67179429	8553170	4	133,140,75,91,	0,385,611,4442,
#Partially deleted in new
chr16	67179480	67180089	chr16:67179480-67180089	0	-	67179480	67179480	8553170	2	478,49,	0,560,
#Partially deleted in new
chr16	67184365	67190204	chr16:67184365-67190204	3	-	67184393	67189676	789624	14	239,125,156,123,130,111,101,126,118,613,220,161,53,234,	0,320,536,770,995,1871,2191,2393,2655,2859,4355,4654,5265,5605,
#Partially deleted in new
chr16	67184378	67190172	chr16:67184378-67190172	0	-	67184378	67189676	789624	12	226,372,123,130,111,101,118,613,37,161,53,202,	0,307,757,982,1858,2178,2642,2846,4525,4641,5252,5592,
#Partially deleted in new
chr16	67184379	67190136	chr16:67184379-67190136	0	-	67184379	67189676	789624	12	225,372,123,130,111,101,118,613,37,176,53,166,	0,306,756,981,1857,2177,2641,2845,4524,4640,5251,5591,
#Partially deleted in new
chr16	67184379	67190099	chr16:67184379-67190099	0	-	67187102	67189676	789624	11	225,125,156,123,130,111,101,126,118,161,469,	0,306,522,756,981,1857,2177,2379,2641,4640,5251,
#Partially deleted in new
chr16	67184380	67185664	chr16:67184380-67185664	0	-	67184380	67184380	8553170	4	224,156,123,304,	0,521,755,980,
#Partially deleted in new
chr16	67187030	67190185	chr16:67187030-67190185	0	-	67187030	67187030	8553170	4	108,161,53,215,	0,1989,2600,2940,
#Partially deleted in new
chr16	67187720	67190138	chr16:67187720-67190138	0	-	67187720	67189676	789624	5	117,220,161,137,168,	0,1000,1299,1910,2250,
#Partially deleted in new
chr16	67192168	67198918	chr16:67192168-67198918	3	+	67192227	67198123	0	10	194,110,162,44,62,295,225,48,45,911,	0,592,840,1303,2229,2517,3613,5430,5698,5839,
#Deleted in new
chr16	67192173	67193278	chr16:67192173-67193278	0	+	67192173	67192173	8553170	2	189,518,	0,587,
#Partially deleted in new
chr16	67192184	67198917	chr16:67192184-67198917	0	+	67192184	67192184	8553170	8	986,44,62,295,225,48,45,910,	0,1287,2213,2501,3597,5414,5682,5823,
#Partially deleted in new
chr16	67192189	67194819	chr16:67192189-67194819	0	+	67192227	67193055	789624	6	173,64,162,44,62,134,	0,571,819,1282,2208,2496,
#Partially deleted in new
chr16	67192206	67196008	chr16:67192206-67196008	0	+	67192227	67194722	789624	6	156,110,94,62,295,227,	0,554,1215,2191,2479,3575,
#Partially deleted in new
chr16	67192207	67196008	chr16:67192207-67196008	0	+	67192227	67194744	789624	5	155,110,62,295,227,	0,553,2190,2478,3574,
#Deleted in new
chr16	67192212	67193484	chr16:67192212-67193484	0	+	67192212	67192212	8553170	3	150,110,476,	0,548,796,
#Partially deleted in new
chr16	67192214	67194918	chr16:67192214-67194918	0	+	67192214	67192214	8553170	5	148,410,44,62,233,	0,546,1257,2183,2471,
#Partially deleted in new
chr16	67192494	67194825	chr16:67192494-67194825	0	+	67192494	67192494	8553170	6	170,110,162,44,62,140,	0,266,514,977,1903,2191,
#Deleted in new
chr16	67192526	67193060	chr16:67192526-67193060	0	+	67192526	67192526	8553170	2	138,300,	0,234,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	67193977	67194799	chr16:67193977-67194799	0	+	67193977	67193977	8553170	2	482,114,	0,708,
#Partially deleted in new
chr16	67194951	67198229	chr16:67194951-67198229	0	+	67194951	67198216	789624	5	29,225,48,45,99,	0,830,2647,2915,3179,
#Deleted in new
chr16	67195650	67198219	chr16:67195650-67198219	0	+	67195650	67195650	8553170	3	356,48,353,	0,1948,2216,
#Partially deleted in new
chr16	67199110	67204029	chr16:67199110-67204029	1	+	67199167	67203877	789624	19	294,41,73,170,100,152,79,51,123,132,102,109,137,164,113,105,83,87,365,	0,442,573,1081,1340,1546,1779,2274,2409,2631,2866,3065,3286,3516,3781,4008,4216,4386,4554,
#Partially deleted in new
chr16	67199110	67204029	chr16:67199110-67204029	3	+	67199167	67203877	789624	20	294,41,73,51,170,100,152,79,51,123,132,102,109,137,164,113,105,83,87,365,	0,442,573,840,1081,1340,1546,1779,2274,2409,2631,2866,3065,3286,3516,3781,4008,4216,4386,4554,
#Partially deleted in new
chr16	67199165	67201548	chr16:67199165-67201548	0	+	67199167	67199704	789624	9	239,30,73,51,100,152,79,27,29,	0,387,518,785,1285,1491,1724,2243,2354,
#Partially deleted in new
chr16	67199508	67204029	chr16:67199508-67204029	1	+	67200287	67203877	789624	19	85,73,51,170,100,152,79,51,123,132,102,109,137,164,113,105,83,87,365,	0,175,442,683,942,1148,1381,1876,2011,2233,2468,2667,2888,3118,3383,3610,3818,3988,4156,
#Partially deleted in new
chr16	67199950	67201599	chr16:67199950-67201599	0	+	67199950	67199950	8553170	7	51,170,100,150,79,51,80,	0,241,500,706,939,1434,1569,
#Deleted in new
chr16	67202320	67202395	chr16:67202320-67202395	3	-	67202320	67202320	5263520	1	75,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	67205174	67206849	chr16:67205174-67206849	3	-	67205174	67205174	8553170	1	1675,	0,
#Partially deleted in new
chr16	67207138	67227010	chr16:67207138-67227010	0	-	67207138	67207138	8553170	6	635,218,144,275,102,36,	0,734,1173,2909,16687,19836,
#Partially deleted in new
chr16	67207139	67226818	chr16:67207139-67226818	1	-	67207604	67210188	789624	7	365,175,218,144,275,102,189,	0,459,733,1172,2908,16686,19490,
#Partially deleted in new
chr16	67207139	67226998	chr16:67207139-67226998	3	-	67207604	67210188	789624	7	365,175,218,144,275,102,24,	0,459,733,1172,2908,16686,19835,
#Partially deleted in new
chr16	67207139	67226818	chr16:67207139-67226818	0	-	67207139	67207139	8553170	7	365,175,218,144,275,102,189,	0,459,733,1172,2908,16686,19490,
#Partially deleted in new
chr16	67207598	67227016	chr16:67207598-67227016	0	-	67207598	67207598	8553170	6	175,218,144,1026,102,42,	0,274,713,2449,16227,19376,
#Partially deleted in new
chr16	67207604	67226998	chr16:67207604-67226998	4	-	67207604	67207604	16724991	6	169,218,144,977,102,24,	0,268,707,2443,16221,19370,
#Partially deleted in new
chr16	67207647	67227013	chr16:67207647-67227013	0	-	67207647	67207647	8553170	5	126,218,301,102,39,	0,225,2400,16178,19327,
#Partially deleted in new
chr16	67207879	67226877	chr16:67207879-67226877	0	-	67207879	67207879	8553170	5	211,144,275,102,53,	0,432,2168,15946,18945,
#Partially deleted in new
chr16	67208389	67226788	chr16:67208389-67226788	0	-	67208389	67208389	8553170	4	405,275,102,159,	0,1658,15436,18240,
#Partially deleted in new
chr16	67210047	67227011	chr16:67210047-67227011	0	-	67210047	67210047	8553170	3	977,102,37,	0,13778,16927,
#Partially deleted in new
chr16	67210347	67227027	chr16:67210347-67227027	0	-	67210347	67210347	8553170	3	623,102,53,	0,13478,16627,
#Partially deleted in new
chr16	67210739	67227048	chr16:67210739-67227048	0	-	67210739	67210739	8553170	3	361,102,74,	0,13086,16235,
#Partially deleted in new
chr16	67227102	67229225	chr16:67227102-67229225	0	+	67227102	67227102	8553170	5	122,96,60,387,250,	0,733,1252,1392,1873,
#Partially deleted in new
chr16	67227112	67229278	chr16:67227112-67229278	3	+	67227218	67229113	789624	6	112,96,60,137,85,303,	0,723,1242,1382,1684,1863,
#Partially deleted in new
chr16	67227112	67229248	chr16:67227112-67229248	0	+	67227112	67227112	8553170	2	112,1413,	0,723,
#Partially deleted in new
chr16	67227117	67228302	chr16:67227117-67228302	0	+	67227117	67227117	8553170	2	107,689,	0,496,
#Partially deleted in new
chr16	67227119	67229262	chr16:67227119-67229262	1	+	67228542	67229113	789624	6	105,213,60,137,85,287,	0,599,1235,1375,1677,1856,
#Partially deleted in new
chr16	67227144	67228956	chr16:67227144-67228956	0	+	67227144	67227144	8553170	4	80,96,60,462,	0,691,1210,1350,
#Partially deleted in new
chr16	67227156	67229278	chr16:67227156-67229278	0	+	67227218	67228635	789624	6	68,96,60,163,85,303,	0,679,1198,1338,1640,1819,
#Partially deleted in new
chr16	67227167	67229278	chr16:67227167-67229278	1	+	67227218	67228920	789624	5	57,96,60,137,482,	0,668,1187,1327,1629,
#Partially deleted in new
chr16	67227212	67228622	chr16:67227212-67228622	0	+	67227218	67227718	789624	4	12,318,60,128,	0,401,1142,1282,
#Partially deleted in new
chr16	67228517	67229278	chr16:67228517-67229278	0	+	67228517	67228517	8553170	3	114,40,303,	0,279,458,
#Partially deleted in new
chr16	67228525	67229278	chr16:67228525-67229278	0	+	67228525	67228525	8553170	2	311,303,	0,450,
#Partially deleted in new
chr16	67228670	67229278	chr16:67228670-67229278	0	+	67228670	67228670	8553170	2	211,303,	0,305,
#Partially deleted in new
chr16	67229386	67230196	chr16:67229386-67230196	0	-	67229386	67229386	8553170	2	604,131,	0,679,
#Partially deleted in new
chr16	67229388	67247658	chr16:67229388-67247658	3	-	67229635	67247410	0	22	330,198,163,193,191,162,120,183,156,611,116,177,149,144,95,112,95,106,68,65,107,449,	0,404,677,925,1212,1799,2041,2248,2650,4268,4968,7168,7577,7850,8086,8268,8645,8813,8991,9514,9959,17821,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr16	67229390	67247464	chr16:67229390-67247464	0	-	67229390	67229390	8553170	20	328,198,163,193,191,162,120,183,156,611,116,177,149,144,95,112,95,766,107,255,	0,402,675,923,1210,1797,2039,2246,2648,4266,4966,7166,7575,7848,8084,8266,8643,8811,9957,17819,
#Partially deleted in new
chr16	67230313	67231080	chr16:67230313-67231080	0	-	67230313	67230313	8553170	2	193,480,	0,287,
#Partially deleted in new
chr16	67230328	67232058	chr16:67230328-67232058	0	-	67231852	67232058	789624	5	178,191,120,264,20,	0,272,1101,1308,1710,
#Partially deleted in new
chr16	67231449	67233761	chr16:67231449-67233761	0	-	67231772	67233761	789624	4	100,202,156,105,	0,187,589,2207,
#Partially deleted in new
chr16	67231789	67234031	chr16:67231789-67234031	0	-	67231789	67231789	8553170	2	405,375,	0,1867,
#Partially deleted in new
chr16	67233680	67247478	chr16:67233680-67247478	0	-	67238261	67247410	789624	13	587,116,169,149,144,95,112,95,69,92,65,107,269,	0,676,2876,3285,3558,3794,3976,4353,4521,4699,5222,5667,13529,
#Partially deleted in new
chr16	67233947	67236616	chr16:67233947-67236616	0	-	67234471	67236616	789624	4	320,116,24,60,	0,409,2463,2609,
#Deleted in new
chr16	67234179	67234754	chr16:67234179-67234754	0	-	67234179	67234179	8553170	2	88,398,	0,177,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	67237682	67272190	chr16:67237682-67272190	0	+	67237682	67237682	8553170	16	774,303,164,538,221,203,90,71,130,89,127,78,171,67,138,1453,	0,14859,17338,17710,18786,19228,19662,19848,20635,21890,22137,24529,26669,27357,28405,33055,
#Partially deleted in new
chr16	67246914	67259942	chr16:67246914-67259942	0	+	67247319	67259942	789624	4	430,303,64,123,	0,5627,12683,12905,
#Partially deleted in new
chr16	67248871	67272058	chr16:67248871-67272058	0	+	67249014	67255111	789624	15	330,264,150,79,92,221,203,90,130,89,127,171,67,138,1321,	0,3670,6163,6521,6967,7597,8039,8473,9446,10701,10948,15480,16168,17216,21866,
#Partially deleted in new
chr16	67248949	67272190	chr16:67248949-67272190	3	+	67249014	67271210	789624	16	252,303,164,79,178,221,203,90,71,130,89,127,171,67,138,1453,	0,3592,6071,6443,6803,7519,7961,8395,8581,9368,10623,10870,15402,16090,17138,21788,
#Partially deleted in new
chr16	67248976	67272190	chr16:67248976-67272190	0	+	67248976	67248976	8553170	15	225,303,164,538,221,203,90,71,130,89,127,171,67,138,1453,	0,3565,6044,6416,7492,7934,8368,8554,9341,10596,10843,15375,16063,17111,21761,
#Partially deleted in new
chr16	67248978	67256478	chr16:67248978-67256478	0	+	67248978	67248978	8553170	5	223,164,79,92,10,	0,6042,6414,6860,7490,
#Partially deleted in new
chr16	67249077	67265148	chr16:67249077-67265148	0	+	67249077	67249077	8553170	4	124,303,171,106,	0,3464,15274,15965,
#Partially deleted in new
chr16	67252735	67265106	chr16:67252735-67265106	0	+	67252735	67265106	789624	5	109,64,127,171,64,	0,6862,7084,11616,12307,
#Partially deleted in new
chr16	67252808	67270980	chr16:67252808-67270980	0	+	67252808	67270980	789624	6	36,164,171,67,138,243,	0,2212,11543,12231,13279,17929,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	67261107	67263784	chr16:67261107-67263784	3	+	67261107	67261107	8553170	1	2677,	0,
#Partially deleted in new
chr16	67277509	67289479	chr16:67277509-67289479	3	+	67280044	67288808	789624	21	3034,96,124,94,78,114,99,149,139,117,183,503,247,90,222,171,178,117,234,116,677,	0,3201,3372,3581,4057,4214,4499,4691,4993,5232,6765,7203,7780,8764,8935,9239,9490,10388,10657,10979,11293,
#Partially deleted in new
chr16	67277509	67289479	chr16:67277509-67289479	0	+	67280044	67280626	789624	20	3297,124,94,78,114,99,149,139,117,183,503,247,90,222,171,178,117,234,116,677,	0,3372,3581,4057,4214,4499,4691,4993,5232,6765,7203,7780,8764,8935,9239,9490,10388,10657,10979,11293,
#Deleted in new
chr16	67277819	67280273	chr16:67277819-67280273	0	+	67280044	67280273	789624	3	126,50,398,	0,921,2056,
#Deleted in new
chr16	67278156	67280265	chr16:67278156-67280265	0	+	67280044	67280265	789624	3	120,50,390,	0,584,1719,
#Deleted in new
chr16	67278833	67280368	chr16:67278833-67280368	0	+	67280044	67280368	789624	2	49,493,	0,1042,
#Deleted in new
chr16	67279146	67280934	chr16:67279146-67280934	0	+	67280044	67280934	789624	3	130,308,53,	0,729,1735,
#Partially deleted in new
chr16	67279237	67289479	chr16:67279237-67289479	1	+	67280044	67288808	789624	22	39,668,96,124,94,78,114,99,149,139,117,183,503,247,90,222,171,178,117,234,116,677,	0,638,1473,1644,1853,2329,2486,2771,2963,3265,3504,5037,5475,6052,7036,7207,7511,7762,8660,8929,9251,9565,
#Partially deleted in new
chr16	67279523	67289473	chr16:67279523-67289473	1	+	67280044	67288808	789624	22	103,668,96,124,94,78,114,99,149,139,117,183,503,247,90,222,171,178,117,234,116,671,	0,352,1187,1358,1567,2043,2200,2485,2677,2979,3218,4751,5189,5766,6750,6921,7225,7476,8374,8643,8965,9279,
#Deleted in new
chr16	67279552	67280152	chr16:67279552-67280152	0	+	67280044	67280152	789624	2	237,277,	0,323,
#Partially deleted in new
chr16	67279588	67289499	chr16:67279588-67289499	1	+	67280044	67288808	789624	20	808,124,94,78,114,99,149,139,117,183,503,247,90,222,171,178,117,234,116,697,	0,1293,1502,1978,2135,2420,2612,2914,3153,4686,5124,5701,6685,6856,7160,7411,8309,8578,8900,9214,
#Deleted in new
chr16	67279595	67280275	chr16:67279595-67280275	0	+	67280044	67280275	789624	2	66,400,	0,280,
#Partially deleted in new
chr16	67279895	67289055	chr16:67279895-67289055	0	+	67280044	67280626	789624	10	911,124,94,78,114,169,139,117,183,253,	0,986,1195,1671,1828,2285,2607,2846,4379,8907,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	67287571	67289307	chr16:67287571-67289307	0	+	67287571	67287571	8553170	4	443,234,116,505,	0,595,917,1231,
#Deleted in new
chr16	67287899	67288942	chr16:67287899-67288942	0	+	67287899	67288831	789624	3	115,234,140,	0,267,903,
#Deleted in new
chr16	67287949	67289072	chr16:67287949-67289072	0	+	67287949	67288495	789624	4	65,234,129,270,	0,217,526,853,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	67289427	67326726	chr16:67289427-67326726	0	-	67289427	67289427	8553170	16	255,102,155,192,628,115,84,143,101,161,2024,132,192,151,297,22,	0,1457,1881,2218,4116,5152,5545,5835,6731,8075,9935,12363,13718,14993,31161,37277,
#Partially deleted in new
chr16	67289432	67293823	chr16:67289432-67293823	0	-	67289614	67293823	789624	2	250,280,	0,4111,
#Partially deleted in new
chr16	67289432	67326753	chr16:67289432-67326753	0	-	67289432	67289432	8553170	15	250,102,155,192,628,115,84,143,101,161,211,1547,151,297,49,	0,1452,1876,2213,4111,5147,5540,5830,6726,8070,9930,12358,14988,31156,37272,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	67289434	67326729	chr16:67289434-67326729	0	-	67289434	67289434	8553170	14	248,102,155,192,628,115,84,997,161,211,1547,151,297,25,	0,1450,1874,2211,4109,5145,5538,5828,8068,9928,12356,14986,31154,37270,
#Partially deleted in new
chr16	67289447	67326763	chr16:67289447-67326763	3	-	67289568	67326707	789624	16	235,102,155,192,628,115,84,143,101,161,211,132,192,151,297,59,	0,1437,1861,2198,4096,5132,5525,5815,6711,8055,9915,12343,13698,14973,31141,37257,
#Partially deleted in new
chr16	67299405	67320790	chr16:67299405-67320790	0	-	67299405	67299405	8553170	4	777,132,192,202,	0,2385,3740,21183,
#Partially deleted in new
chr16	67303115	67326760	chr16:67303115-67326760	0	-	67303115	67303115	8553170	3	222,297,56,	0,17473,23589,
#Partially deleted in new
chr16	67303176	67326714	chr16:67303176-67326714	0	-	67320830	67326707	789624	4	161,151,297,93,	0,1244,17412,23445,
#Partially deleted in new
chr16	67305373	67326739	chr16:67305373-67326739	0	-	67305373	67305373	8553170	3	238,297,35,	0,15215,21331,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	67320645	67326097	chr16:67320645-67326097	0	-	67320645	67320873	789624	2	240,183,	0,5269,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	67321657	67321987	chr16:67321657-67321987	3	-	67321657	67321657	8553170	1	330,	0,
#Partially deleted in new
chr16	67326843	67385200	chr16:67326843-67385200	3	+	67326862	67385089	789624	14	89,128,193,97,89,125,52,441,299,166,146,124,115,331,	0,15113,19412,20651,23358,36746,38460,40173,44100,48403,49883,51745,55289,58026,
#Partially deleted in new
chr16	67326843	67365355	chr16:67326843-67365355	0	+	67350217	67365355	789624	7	89,102,193,97,89,125,52,	0,15139,19412,20651,23358,36746,38460,
#Partially deleted in new
chr16	67326843	67363710	chr16:67326843-67363710	0	+	67326862	67346302	789624	5	89,193,97,89,121,	0,19412,20651,23358,36746,
#Partially deleted in new
chr16	67326845	67363712	chr16:67326845-67363712	0	+	67326862	67363712	789624	2	87,123,	0,36744,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	67326882	67372102	chr16:67326882-67372102	0	+	67326882	67326882	8553170	7	50,128,193,97,89,125,1159,	0,15074,19373,20612,23319,36707,44061,
#Partially deleted in new
chr16	67326974	67363605	chr16:67326974-67363605	0	+	67350217	67363605	789624	6	73,128,193,97,89,16,	0,14982,19281,20520,23227,36615,
#Partially deleted in new
chr16	67326979	67347591	chr16:67326979-67347591	0	+	67326979	67326979	8553170	4	68,128,193,97,	0,14977,19276,20515,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	67347349	67372102	chr16:67347349-67372102	0	+	67347466	67350221	789624	4	166,89,125,1159,	0,2852,16240,23594,
#Partially deleted in new
chr16	67347367	67385125	chr16:67347367-67385125	0	+	67347466	67370997	789624	8	224,89,125,299,155,124,115,256,	0,2834,16222,23576,27890,31221,34765,37502,
#Partially deleted in new
chr16	67347375	67385200	chr16:67347375-67385200	1	+	67347466	67385089	789624	11	216,89,125,52,441,299,166,146,124,115,331,	0,2826,16214,17928,19641,23568,27871,29351,31213,34757,37494,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	67347375	67385200	chr16:67347375-67385200	0	+	67347466	67363634	789624	10	216,89,122,125,441,299,166,124,115,331,	0,2826,14808,16214,19641,23568,27871,31213,34757,37494,
#Partially deleted in new
chr16	67347375	67367359	chr16:67347375-67367359	0	+	67347466	67350221	789624	3	140,89,343,	0,2826,19641,
#Partially deleted in new
chr16	67347387	67385173	chr16:67347387-67385173	0	+	67347466	67375257	789624	7	204,89,166,146,124,115,304,	0,2814,27859,29339,31201,34745,37482,
#Partially deleted in new
chr16	67347388	67367185	chr16:67347388-67367185	0	+	67347466	67350221	789624	5	127,89,125,52,169,	0,2813,16201,17915,19628,
#Partially deleted in new
chr16	67347402	67385200	chr16:67347402-67385200	1	+	67347466	67385089	789624	9	189,89,125,52,441,299,124,115,331,	0,2799,16187,17901,19614,23541,31186,34730,37467,
#Partially deleted in new
chr16	67365142	67367398	chr16:67365142-67367398	0	+	67365142	67365142	8553170	2	213,382,	0,1874,
#Partially deleted in new
chr16	67389808	67393535	chr16:67389808-67393535	3	-	67390173	67391111	0	4	554,154,194,156,	0,670,1115,3571,
#Partially deleted in new
chr16	67389810	67391953	chr16:67389810-67391953	1	-	67390173	67391111	0	3	552,154,1030,	0,668,1113,
#Partially deleted in new
chr16	67389824	67393518	chr16:67389824-67393518	1	-	67390173	67391111	0	5	538,154,194,91,139,	0,654,1099,3122,3555,
#Partially deleted in new
chr16	67389845	67393491	chr16:67389845-67393491	1	-	67390173	67391111	0	4	517,154,194,545,	0,633,1078,3101,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	67390478	67393481	chr16:67390478-67393481	0	-	67390478	67390478	8553170	2	639,102,	0,2901,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	67390690	67390850	chr16:67390690-67390850	3	-	67390690	67390690	8553170	1	160,	0,
#Partially deleted in new
chr16	67394151	67416486	chr16:67394151-67416486	1	-	67394609	67407775	789624	12	742,61,94,83,113,159,125,102,176,243,47,316,	0,850,1035,1332,4060,4421,4668,5203,6805,12048,13615,22019,
#Partially deleted in new
chr16	67394418	67416474	chr16:67394418-67416474	3	-	67394665	67407775	789624	11	475,220,83,113,159,125,102,176,243,47,304,	0,583,1065,3793,4154,4401,4936,6538,11781,13348,21752,
#Deleted in new
chr16	67394424	67396257	chr16:67394424-67396257	0	-	67394424	67394424	8553170	5	469,61,94,83,482,	0,577,762,1059,1351,
#Partially deleted in new
chr16	67395504	67404553	chr16:67395504-67404553	0	-	67395504	67395504	8553170	6	62,113,125,102,109,96,	0,2707,3315,3850,5452,8953,
#Deleted in new
chr16	67395565	67396287	chr16:67395565-67396287	0	-	67395565	67395565	8553170	2	26,512,	0,210,
#Partially deleted in new
chr16	67404157	67416833	chr16:67404157-67416833	0	-	67404157	67404157	8553170	4	555,243,47,63,	0,2042,3609,12613,
#Partially deleted in new
chr16	67430651	67436261	chr16:67430651-67436261	0	+	67430651	67430651	8553170	4	128,213,186,13,	0,4976,5305,5597,
#Deleted in new
chr16	67430666	67431464	chr16:67430666-67431464	3	-	67430666	67430666	8553170	2	340,135,	0,663,
#Partially deleted in new
chr16	67431116	67437553	chr16:67431116-67437553	3	+	67431248	67437003	789624	5	397,213,186,138,966,	0,4511,4840,5132,5471,
#Deleted in new
chr16	67431121	67433184	chr16:67431121-67433184	0	+	67431121	67431121	8553170	2	27,551,	0,1512,
#Partially deleted in new
chr16	67431365	67436134	chr16:67431365-67436134	0	+	67431365	67435561	789624	3	148,308,178,	0,4167,4591,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	67438013	67441732	chr16:67438013-67441732	0	-	67438013	67438013	8553170	4	676,78,177,2459,	0,779,957,1260,
#Partially deleted in new
chr16	67438018	67481237	chr16:67438018-67481237	3	-	67438527	67481086	789624	8	671,78,177,78,80,179,172,281,	0,774,952,1255,5080,6509,15525,42938,
#Partially deleted in new
chr16	67438018	67481110	chr16:67438018-67481110	1	-	67438527	67453614	789624	9	452,184,78,177,78,80,179,172,154,	0,487,774,952,1255,5080,6509,15525,42938,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	67438036	67439818	chr16:67438036-67439818	0	-	67438036	67438036	8553170	2	1111,545,	0,1237,
#Partially deleted in new
chr16	67438320	67481079	chr16:67438320-67481079	0	-	67438527	67481079	789624	6	369,78,177,78,80,123,	0,472,650,953,4778,42636,
#Partially deleted in new
chr16	67438412	67459225	chr16:67438412-67459225	0	-	67457603	67459225	789624	9	277,78,177,78,80,179,172,88,128,	0,380,558,861,4686,6115,15131,19151,20685,
#Partially deleted in new
chr16	67438475	67481117	chr16:67438475-67481117	1	-	67438527	67481086	789624	9	214,78,177,78,80,179,123,172,161,	0,317,495,798,4623,6052,13762,15068,42481,
#Partially deleted in new
chr16	67438540	67441392	chr16:67438540-67441392	0	-	67438540	67438540	8553170	5	149,78,177,78,100,	0,252,430,733,2752,
#Partially deleted in new
chr16	67438808	67481148	chr16:67438808-67481148	0	-	67444692	67481086	789624	6	62,177,78,80,179,192,	0,162,465,4290,5719,42148,
#Partially deleted in new
chr16	67438821	67481181	chr16:67438821-67481181	0	-	67457607	67481086	789624	8	49,177,78,80,179,172,88,225,	0,149,452,4277,5706,14722,18742,42135,
#Partially deleted in new
chr16	67438824	67453715	chr16:67438824-67453715	0	-	67438824	67453715	789624	6	46,125,78,80,179,172,	0,146,449,4274,5703,14719,
#Partially deleted in new
chr16	67438844	67443407	chr16:67438844-67443407	0	-	67438844	67438844	8553170	4	26,177,78,309,	0,126,429,4254,
#Partially deleted in new
chr16	67439052	67459180	chr16:67439052-67459180	0	-	67458965	67459180	789624	6	95,78,80,179,172,217,	0,221,4046,5475,14491,19911,
#Partially deleted in new
chr16	67439087	67481086	chr16:67439087-67481086	0	-	67445919	67481086	789624	7	60,78,80,179,154,172,130,	0,186,4011,5440,6724,14456,41869,
#Partially deleted in new
chr16	67439107	67481168	chr16:67439107-67481168	0	-	67443138	67481086	789624	5	40,78,80,172,212,	0,166,3991,14436,41849,
#Partially deleted in new
chr16	67443099	67459219	chr16:67443099-67459219	0	-	67459098	67459219	789624	4	79,179,172,122,	0,1428,10444,15998,
#Partially deleted in new
chr16	67452243	67481157	chr16:67452243-67481157	0	-	67452243	67452243	8553170	3	183,172,201,	0,1300,28713,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	67454578	67481157	chr16:67454578-67481157	0	-	67454578	67454578	8553170	2	3073,201,	0,26378,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	67481313	67481956	chr16:67481313-67481956	0	+	67481313	67481313	8553170	1	643,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	67481383	67484669	chr16:67481383-67484669	1	+	67481383	67481383	8553170	2	136,560,	0,2726,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	67481406	67505063	chr16:67481406-67505063	3	+	67481406	67481406	8553170	4	113,219,91,1039,	0,2703,10624,22618,
#Deleted in new
chr16	67482570	67483813	chr16:67482570-67483813	3	-	67482635	67483398	0	4	248,86,133,297,	0,454,698,946,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	67484241	67487250	chr16:67484241-67487250	1	+	67484241	67484241	8553170	2	87,437,	0,2572,
#Partially deleted in new
chr16	67517861	67528632	chr16:67517861-67528632	0	-	67517861	67517861	8553170	2	524,33,	0,10738,
#Partially deleted in new
chr16	67517949	67528675	chr16:67517949-67528675	3	-	67517949	67517949	789624	2	436,359,	0,10367,
#Partially deleted in new
chr16	67518417	67538471	chr16:67518417-67538471	0	+	67538446	67538471	789624	2	196,48,	0,20006,
#Partially deleted in new
chr16	67528287	67539021	chr16:67528287-67539021	0	+	67538446	67539021	789624	4	226,127,153,32,	0,10136,10384,10702,
#Partially deleted in new
chr16	67528816	67546786	chr16:67528816-67546786	1	+	67538446	67546463	789624	22	98,127,165,79,24,54,153,64,44,126,149,130,1398,122,133,136,162,159,197,84,91,421,	0,9607,9843,10173,10911,11029,11236,11483,11641,11762,12613,12836,13050,14531,15482,15878,16139,16559,16847,17132,17324,17549,
#Partially deleted in new
chr16	67528866	67540704	chr16:67528866-67540704	0	+	67528866	67528866	8553170	8	48,79,24,54,153,64,44,126,	0,10123,10861,10979,11186,11433,11591,11712,
#Partially deleted in new
chr16	67528869	67546786	chr16:67528869-67546786	3	+	67538446	67546463	789624	22	45,127,153,79,24,54,153,64,44,126,149,130,1398,122,133,136,162,159,197,84,91,421,	0,9554,9802,10120,10858,10976,11183,11430,11588,11709,12560,12783,12997,14478,15429,15825,16086,16506,16794,17079,17271,17496,
#Partially deleted in new
chr16	67528880	67546786	chr16:67528880-67546786	1	+	67529822	67546463	789624	23	34,223,127,153,79,24,54,153,64,44,126,149,130,1398,119,133,136,162,159,197,84,91,421,	0,756,9543,9791,10109,10847,10965,11172,11419,11577,11698,12549,12772,12986,14470,15418,15814,16075,16495,16783,17068,17260,17485,
#Partially deleted in new
chr16	67529346	67538544	chr16:67529346-67538544	0	+	67529822	67538544	789624	2	513,121,	0,9077,
#Partially deleted in new
chr16	67529726	67546637	chr16:67529726-67546637	1	+	67529822	67546463	789624	22	133,127,153,79,24,54,153,64,44,126,149,130,1398,122,133,136,162,159,197,84,91,272,	0,8697,8945,9263,10001,10119,10326,10573,10731,10852,11703,11926,12140,13621,14572,14968,15229,15649,15937,16222,16414,16639,
#Partially deleted in new
chr16	67529790	67538996	chr16:67529790-67538996	0	+	67538446	67538996	789624	4	297,127,153,7,	0,8633,8881,9199,
#Partially deleted in new
chr16	67531547	67540094	chr16:67531547-67540094	0	+	67538446	67540094	789624	7	83,127,153,79,24,54,42,	0,6876,7124,7442,8180,8298,8505,
#Partially deleted in new
chr16	67537453	67546788	chr16:67537453-67546788	1	+	67537578	67546463	789624	22	144,127,153,79,24,54,153,64,44,126,149,130,1398,122,133,136,162,159,197,84,91,423,	0,970,1218,1536,2274,2392,2599,2846,3004,3125,3976,4199,4413,5894,6845,7241,7502,7922,8210,8495,8687,8912,
#Partially deleted in new
chr16	67537472	67542665	chr16:67537472-67542665	0	+	67537578	67542665	789624	12	125,127,79,24,54,153,64,44,126,149,130,799,	0,951,1517,2255,2373,2580,2827,2985,3106,3957,4180,4394,
#Partially deleted in new
chr16	67538077	67542668	chr16:67538077-67542668	0	+	67538446	67542668	789624	12	473,153,79,24,54,153,64,44,126,149,130,802,	0,594,912,1650,1768,1975,2222,2380,2501,3352,3575,3789,
#Partially deleted in new
chr16	67538463	67541578	chr16:67538463-67541578	0	+	67538463	67540360	789624	10	87,153,79,24,50,153,64,44,126,149,	0,208,526,1264,1386,1589,1836,1994,2115,2966,
#Deleted in new
chr16	67538556	67540106	chr16:67538556-67540106	3	-	67538556	67538556	8553170	3	251,217,62,	0,709,1488,
#Partially deleted in new
chr16	67538964	67541578	chr16:67538964-67541578	0	+	67538964	67538964	8553170	8	104,24,50,153,64,44,126,149,	0,763,885,1088,1335,1493,1614,2465,
#Partially deleted in new
chr16	67539864	67541758	chr16:67539864-67541758	0	+	67539864	67539864	8553170	6	35,153,64,247,149,106,	0,188,435,593,1565,1788,
#Partially deleted in new
chr16	67540124	67541577	chr16:67540124-67541577	0	+	67540124	67540124	8553170	3	239,247,148,	0,333,1305,
#Partially deleted in new
chr16	67540352	67541713	chr16:67540352-67541713	0	+	67540352	67541713	789624	5	11,44,153,149,61,	0,105,199,1077,1300,
#Deleted in new
chr16	67541346	67546786	chr16:67541346-67546786	0	+	67541346	67541346	8553170	11	232,130,1398,119,133,136,162,159,197,283,421,	0,306,520,2004,2952,3348,3609,4029,4317,4602,5019,
#Deleted in new
chr16	67542122	67542963	chr16:67542122-67542963	3	-	67542122	67542122	8553170	2	216,120,	0,721,
#Deleted in new
chr16	67542303	67542572	chr16:67542303-67542572	3	-	67542303	67542303	8553170	2	125,82,	0,187,
#Deleted in new
chr16	67542998	67543826	chr16:67542998-67543826	0	+	67542998	67542998	8553170	2	266,479,	0,349,
#Deleted in new
chr16	67544393	67545797	chr16:67544393-67545797	0	+	67544393	67545797	789624	4	38,136,159,134,	0,301,982,1270,
#Deleted in new
chr16	67545371	67546067	chr16:67545371-67546067	0	+	67545371	67545371	8553170	3	163,197,119,	0,292,577,
#Deleted in new
chr16	67545536	67546005	chr16:67545536-67546005	0	+	67545536	67545536	8553170	2	324,57,	0,412,
#Partially deleted in new
chr16	67549213	67563958	chr16:67549213-67563958	3	-	67549213	67549213	8553170	2	134,664,	0,14081,
#Deleted in new
chr16	67549218	67549733	chr16:67549218-67549733	1	-	67549218	67549218	8553170	1	515,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	67550814	67552935	chr16:67550814-67552935	3	-	67550814	67550814	8553170	1	2121,	0,
#Partially deleted in new
chr16	67561410	67562309	chr16:67561410-67562309	3	-	67561410	67561410	8553170	1	899,	0,
#Partially deleted in new
chr16	67562406	67639185	chr16:67562406-67639185	3	+	67610832	67637872	0	12	318,117,790,171,134,121,150,161,183,136,162,1498,	0,8741,48417,49544,54338,58290,59035,64148,65963,66991,74283,75281,
#Partially deleted in new
chr16	67562466	67639176	chr16:67562466-67639176	1	+	67610832	67637872	0	13	258,117,117,790,171,134,121,150,161,183,136,162,1489,	0,8681,10016,48357,49484,54278,58230,58975,64088,65903,66931,74223,75221,
#Partially deleted in new
chr16	67562488	67611321	chr16:67562488-67611321	0	+	67610832	67611321	789624	2	236,498,	0,48335,
#Partially deleted in new
chr16	67562572	67639168	chr16:67562572-67639168	1	+	67616776	67637872	0	10	152,117,134,121,150,161,183,136,162,1481,	0,8575,54172,58124,58869,63982,65797,66825,74117,75115,
#Partially deleted in new
chr16	67562588	67639138	chr16:67562588-67639138	1	+	67610832	67637872	789624	12	136,117,790,171,134,121,150,161,183,136,162,1445,	0,8559,48235,49362,54156,58108,58853,63966,65781,66809,74101,75105,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	67567890	67611239	chr16:67567890-67611239	0	+	67610832	67611239	789624	3	641,117,416,	0,3257,42933,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	67570740	67639175	chr16:67570740-67639175	1	+	67610832	67637872	0	12	100,117,790,171,134,121,150,161,183,136,162,1488,	0,407,40083,41210,46004,49956,50701,55814,57629,58657,65949,66947,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	67570772	67639162	chr16:67570772-67639162	1	+	67610832	67637872	0	11	492,790,171,134,121,150,161,183,136,162,1475,	0,40051,41178,45972,49924,50669,55782,57597,58625,65917,66915,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	67570773	67639163	chr16:67570773-67639163	1	+	67610832	67637872	789624	12	67,117,790,171,134,121,150,161,183,136,162,1470,	0,374,40050,41177,45971,49923,50668,55781,57596,58624,65916,66920,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	67610589	67638966	chr16:67610589-67638966	1	+	67610832	67637872	0	10	1024,171,134,121,150,161,183,136,162,1279,	0,1361,6155,10107,10852,15965,17780,18808,26100,27098,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	67610826	67612465	chr16:67610826-67612465	0	+	67610826	67610826	8553170	2	787,515,	0,1124,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	67614327	67627910	chr16:67614327-67627910	0	+	67614327	67614327	8553170	3	2551,895,1356,	0,6369,12227,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	67614380	67616146	chr16:67614380-67616146	3	-	67614380	67614380	8553170	2	71,1255,	0,511,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	67614962	67639039	chr16:67614962-67639039	0	+	67614962	67614962	8553170	9	1916,121,150,90,161,183,136,162,1352,	0,5734,6479,8357,11592,13407,14435,21727,22725,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	67615308	67639162	chr16:67615308-67639162	0	+	67615308	67615308	8553170	8	1570,121,150,161,183,136,162,1469,	0,5388,6133,11246,13061,14089,21381,22385,
#Partially deleted in new
chr16	67620886	67639173	chr16:67620886-67639173	0	+	67620886	67620886	8553170	6	705,161,183,136,162,1486,	0,5668,7483,8511,15803,16801,
#Partially deleted in new
chr16	67626508	67639130	chr16:67626508-67639130	0	+	67626508	67626508	8553170	5	207,183,136,162,1443,	0,1861,2889,10181,11179,
#Partially deleted in new
chr16	67644918	67657569	chr16:67644918-67657569	1	+	67645246	67657518	789624	38	368,92,54,63,125,92,71,74,76,89,95,87,113,263,105,70,82,97,58,173,163,102,129,114,161,88,141,67,236,101,361,123,37,72,222,81,78,164,	0,621,805,1099,1267,1507,1795,1981,2197,2380,2589,2761,2927,3133,3479,3766,3974,4157,4335,4528,4887,5130,6268,6482,6766,7002,7280,7553,8100,9230,9413,9859,11112,11309,11505,11882,12320,12487,
#Deleted in new
chr16	67644987	67647612	chr16:67644987-67647612	0	+	67645246	67646196	789624	10	299,54,63,125,92,71,74,76,89,105,	0,736,1030,1198,1438,1726,1912,2128,2311,2520,
#Deleted in new
chr16	67645164	67646247	chr16:67645164-67646247	0	+	67645164	67645164	8553170	4	122,238,63,62,	0,375,853,1021,
#Partially deleted in new
chr16	67645246	67657518	chr16:67645246-67657518	3	+	67645246	67657518	789624	38	40,92,54,63,125,92,71,74,76,89,95,87,113,78,77,105,70,82,97,58,173,163,102,129,114,161,88,141,67,236,101,361,123,37,72,222,78,113,	0,293,477,771,939,1179,1467,1653,1869,2052,2261,2433,2599,2805,2991,3151,3438,3646,3829,4007,4200,4559,4802,5940,6154,6438,6674,6952,7225,7772,8902,9085,9531,10784,10981,11177,11992,12159,
#Deleted in new
chr16	67647446	67648477	chr16:67647446-67648477	0	+	67647446	67647446	8553170	6	156,87,113,78,77,80,	0,233,399,605,791,951,
#Deleted in new
chr16	67647868	67653205	chr16:67647868-67653205	0	+	67647868	67647868	8553170	5	90,703,3447,67,187,	0,183,1024,4603,5150,
#Deleted in new
chr16	67648506	67650120	chr16:67648506-67650120	0	+	67648506	67648506	8553170	7	248,82,97,58,173,163,72,	0,386,569,747,940,1299,1542,
#Deleted in new
chr16	67649924	67652008	chr16:67649924-67652008	0	+	67649924	67649924	8553170	4	226,129,445,88,	0,1262,1476,1996,
#Deleted in new
chr16	67651885	67653213	chr16:67651885-67653213	0	+	67651885	67651885	8553170	4	123,141,67,195,	0,313,586,1133,
#Deleted in new
chr16	67652964	67654461	chr16:67652964-67654461	0	+	67652964	67652964	8553170	3	290,101,130,	0,1184,1367,
#Partially deleted in new
chr16	67654517	67657569	chr16:67654517-67657569	0	+	67654517	67656231	789624	8	175,123,37,106,222,48,78,164,	0,260,1513,1676,1906,2316,2721,2888,
#Deleted in new
chr16	67656839	67657566	chr16:67656839-67657566	0	+	67656839	67656839	8553170	2	477,161,	0,566,
#Deleted in new
chr16	67657511	67660810	chr16:67657511-67660810	1	-	67657605	67660220	0	12	173,92,377,87,97,152,35,45,77,94,134,689,	0,250,474,1043,1208,1416,1717,1863,2025,2190,2391,2610,
#Deleted in new
chr16	67657512	67660815	chr16:67657512-67660815	1	-	67657605	67660478	0	12	172,92,377,87,97,152,35,45,77,94,143,694,	0,249,473,1042,1207,1415,1716,1862,2024,2189,2390,2609,
#Deleted in new
chr16	67657528	67659263	chr16:67657528-67659263	0	-	67657643	67659263	789624	7	156,92,43,87,97,152,35,	0,233,457,1026,1191,1399,1700,
#Deleted in new
chr16	67657531	67660743	chr16:67657531-67660743	1	-	67657605	67660220	0	12	153,92,377,87,97,152,35,45,77,94,143,622,	0,230,454,1023,1188,1396,1697,1843,2005,2170,2371,2590,
#Deleted in new
chr16	67657531	67660245	chr16:67657531-67660245	1	-	67657605	67660220	789624	12	153,92,377,87,97,152,35,45,77,94,143,124,	0,230,454,1023,1188,1396,1697,1843,2005,2170,2371,2590,
#Deleted in new
chr16	67657532	67660271	chr16:67657532-67660271	0	-	67657532	67657532	8553170	3	321,1810,395,	0,453,2344,
#Deleted in new
chr16	67657532	67658323	chr16:67657532-67658323	0	-	67657532	67657532	8553170	2	152,562,	0,229,
#Deleted in new
chr16	67657545	67660239	chr16:67657545-67660239	1	-	67657605	67660220	789624	12	139,53,377,87,97,152,35,45,77,94,134,118,	0,216,440,1009,1174,1382,1683,1829,1991,2156,2357,2576,
#Deleted in new
chr16	67657562	67660281	chr16:67657562-67660281	0	-	67657562	67657562	8553170	9	122,92,377,87,97,686,94,143,160,	0,199,423,992,1157,1365,2139,2340,2559,
#Deleted in new
chr16	67657605	67660478	chr16:67657605-67660478	3	-	67657605	67660478	789624	12	79,92,377,87,97,152,35,45,77,94,134,357,	0,156,380,949,1114,1322,1623,1769,1931,2096,2297,2516,
#Deleted in new
chr16	67658139	67659949	chr16:67658139-67659949	0	-	67659898	67659949	789624	9	223,87,97,152,35,45,77,94,73,	0,415,580,788,1089,1235,1397,1562,1737,
#Deleted in new
chr16	67658742	67660214	chr16:67658742-67660214	0	-	67658742	67658742	8553170	7	90,152,35,45,77,94,312,	0,185,486,632,794,959,1160,
#Deleted in new
chr16	67659052	67660232	chr16:67659052-67660232	0	-	67659052	67659052	8553170	3	743,143,111,	0,850,1069,
#Deleted in new
chr16	67659464	67660264	chr16:67659464-67660264	0	-	67659464	67659464	8553170	3	149,94,143,	0,237,657,
#Deleted in new
chr16	67659617	67660303	chr16:67659617-67660303	0	-	67659617	67659617	8553170	2	178,401,	0,285,
#Deleted in new
chr16	67659646	67660271	chr16:67659646-67660271	0	-	67659646	67659646	8553170	2	149,395,	0,230,
#Deleted in new
chr16	67660945	67662774	chr16:67660945-67662774	1	+	67661038	67662647	789624	3	156,133,882,	0,509,947,
#Deleted in new
chr16	67660947	67662778	chr16:67660947-67662778	3	+	67661038	67662647	0	3	154,223,883,	0,507,948,
#Deleted in new
chr16	67660958	67662774	chr16:67660958-67662774	1	+	67661038	67662647	0	3	143,223,882,	0,496,934,
#Deleted in new
chr16	67661231	67662730	chr16:67661231-67662730	0	+	67661231	67661231	8553170	2	446,835,	0,664,
#Partially deleted in new
chr16	67662944	67666764	chr16:67662944-67666764	3	-	67663160	67666442	789624	7	377,137,164,126,173,195,407,	0,475,712,992,2051,3126,3413,
#Deleted in new
chr16	67662945	67664512	chr16:67662945-67664512	0	-	67662945	67662945	8553170	4	376,137,164,576,	0,474,711,991,
#Partially deleted in new
chr16	67662969	67666727	chr16:67662969-67666727	1	-	67663457	67666442	789624	6	352,137,126,173,195,370,	0,450,967,2026,3101,3388,
#Partially deleted in new
chr16	67663217	67666274	chr16:67663217-67666274	0	-	67663217	67663217	8553170	5	104,137,164,126,204,	0,202,439,719,2853,
#Deleted in new
chr16	67663275	67663841	chr16:67663275-67663841	0	-	67663275	67663275	8553170	2	46,422,	0,144,
#Partially deleted in new
chr16	67663786	67666129	chr16:67663786-67666129	0	-	67663786	67666129	789624	3	34,173,59,	0,1209,2284,
#Partially deleted in new
chr16	67664952	67667265	chr16:67664952-67667265	0	-	67664952	67664952	8553170	3	216,195,477,	0,1118,1836,
#Deleted in new
chr16	67666815	67668758	chr16:67666815-67668758	3	+	67666970	67668600	789624	4	257,230,221,559,	0,480,1062,1384,
#Deleted in new
chr16	67666815	67668757	chr16:67666815-67668757	0	+	67666815	67666815	8553170	2	257,1462,	0,480,
#Deleted in new
chr16	67666832	67668098	chr16:67666832-67668098	0	+	67666832	67666832	8553170	2	240,221,	0,1045,
#Deleted in new
chr16	67666836	67668757	chr16:67666836-67668757	0	+	67666970	67667295	789624	4	236,299,221,558,	0,390,1041,1363,
#Deleted in new
chr16	67666889	67668215	chr16:67666889-67668215	0	+	67666970	67668215	789624	4	183,230,221,43,	0,406,988,1283,
#Deleted in new
chr16	67667307	67668196	chr16:67667307-67668196	0	+	67667307	67668172	789624	2	218,319,	0,570,
#Partially deleted in new
chr16	67674530	67719339	chr16:67674530-67719339	1	-	67675990	67685715	789624	3	1523,291,177,	0,10981,44632,
#Partially deleted in new
chr16	67674532	67719421	chr16:67674532-67719421	3	-	67675154	67685715	789624	3	1521,346,259,	0,10924,44630,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	67674533	67677484	chr16:67674533-67677484	0	-	67674533	67674533	8553170	1	2951,	0,
#Partially deleted in new
chr16	67675899	67685612	chr16:67675899-67685612	0	-	67675990	67685612	789624	3	154,92,156,	0,1866,9557,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	67680433	67719300	chr16:67680433-67719300	1	-	67685376	67685715	789624	2	5369,138,	0,38729,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	67680748	67719324	chr16:67680748-67719324	0	-	67685376	67685715	789624	3	742,1125,162,	0,3929,38414,
#Partially deleted in new
chr16	67683279	67719330	chr16:67683279-67719330	1	-	67683570	67685715	789624	3	305,346,168,	0,2177,35883,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	67723065	67806652	chr16:67723065-67806652	3	-	67726427	67806536	789624	14	3493,112,146,122,205,149,109,113,185,23,168,53,112,351,	0,4261,4685,5324,6214,6614,6872,8406,11792,14947,21222,48968,82362,83236,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	67723101	67806652	chr16:67723101-67806652	1	-	67726427	67806536	789624	13	3457,112,146,122,205,149,109,113,185,191,53,112,351,	0,4225,4649,5288,6178,6578,6836,8370,11756,21163,48932,82326,83200,
#Partially deleted in new
chr16	67726004	67806560	chr16:67726004-67806560	1	-	67726427	67806536	789624	13	554,112,146,212,205,149,109,113,185,23,53,112,259,	0,1322,1746,2385,3275,3675,3933,5467,8853,12008,46029,79423,80297,
#Partially deleted in new
chr16	67726008	67806557	chr16:67726008-67806557	0	-	67763449	67806536	789624	17	550,112,146,122,205,149,109,113,185,23,168,160,146,147,53,112,256,	0,1318,1742,2381,3271,3671,3929,5463,8849,12004,18279,33564,36430,37344,46025,79419,80293,
#Partially deleted in new
chr16	67726030	67806560	chr16:67726030-67806560	1	-	67726427	67806536	789624	14	528,112,146,212,205,149,109,113,185,23,168,53,112,259,	0,1296,1720,2359,3249,3649,3907,5441,8827,11982,18257,46003,79397,80271,
#Partially deleted in new
chr16	67731028	67806557	chr16:67731028-67806557	0	-	67731028	67731028	8553170	7	556,185,23,168,53,112,256,	0,3829,6984,13259,41005,74399,75273,
#Partially deleted in new
chr16	67731083	67806560	chr16:67731083-67806560	0	-	67744421	67806536	789624	6	501,185,23,168,112,259,	0,3774,6929,13204,74344,75218,
#Partially deleted in new
chr16	67734968	67806560	chr16:67734968-67806560	0	-	67772072	67806536	789624	5	74,23,168,53,259,	0,3044,9319,37065,71333,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	67735644	67806518	chr16:67735644-67806518	0	-	67735644	67735644	8553170	6	110,23,168,53,112,217,	0,2368,8643,36389,69783,70657,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	67738587	67739922	chr16:67738587-67739922	3	-	67738587	67738587	8553170	2	486,83,	0,1252,
#Partially deleted in new
chr16	67806764	67828014	chr16:67806764-67828014	1	+	67807149	67827993	789624	14	432,100,127,197,136,170,160,131,126,153,110,127,107,262,	0,7537,14334,17818,18372,18902,19152,19387,19672,19927,20198,20484,20708,20988,
#Partially deleted in new
chr16	67806877	67828064	chr16:67806877-67828064	0	+	67807149	67824621	789624	12	319,100,197,136,410,131,126,153,110,127,107,312,	0,7424,17705,18259,18789,19274,19559,19814,20085,20371,20595,20875,
#Partially deleted in new
chr16	67806907	67828068	chr16:67806907-67828068	0	+	67807149	67824621	789624	13	289,100,113,127,197,136,616,126,153,110,127,107,316,	0,7394,13931,14191,17675,18229,18759,19529,19784,20055,20341,20565,20845,
#Partially deleted in new
chr16	67807073	67828064	chr16:67807073-67828064	0	+	67807073	67807073	8553170	13	123,100,127,197,136,410,131,126,153,110,127,107,312,	0,7228,14025,17509,18063,18593,19078,19363,19618,19889,20175,20399,20679,
#Partially deleted in new
chr16	67807090	67828064	chr16:67807090-67828064	0	+	67807090	67807090	8553170	11	106,100,136,410,131,126,153,110,127,107,312,	0,7211,18046,18576,19061,19346,19601,19872,20158,20382,20662,
#Partially deleted in new
chr16	67807099	67824783	chr16:67807099-67824783	0	+	67807149	67823645	789624	5	97,100,127,94,201,	0,7202,13999,16526,17483,
#Partially deleted in new
chr16	67807104	67828067	chr16:67807104-67828067	1	+	67807149	67827993	789624	16	92,100,113,127,94,197,136,170,160,131,126,153,110,127,107,315,	0,7197,13734,13994,16521,17478,18032,18562,18812,19047,19332,19587,19858,20144,20368,20648,
#Partially deleted in new
chr16	67807106	67825267	chr16:67807106-67825267	0	+	67824671	67825267	789624	5	279,100,127,197,131,	0,7195,13992,17476,18030,
#Partially deleted in new
chr16	67807107	67825262	chr16:67807107-67825262	0	+	67807149	67825262	789624	5	89,100,113,127,126,	0,7194,13731,13991,18029,
#Partially deleted in new
chr16	67807123	67828068	chr16:67807123-67828068	3	+	67820853	67827993	789624	16	262,100,113,127,94,197,136,170,160,131,126,153,110,127,107,316,	0,7178,13715,13975,16502,17459,18013,18543,18793,19028,19313,19568,19839,20125,20349,20629,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	67807126	67814401	chr16:67807126-67814401	0	+	67807126	67807126	8553170	3	259,115,100,	0,541,7175,
#Partially deleted in new
chr16	67807127	67824771	chr16:67807127-67824771	0	+	67824671	67824771	789624	3	258,100,189,	0,7174,17455,
#Partially deleted in new
chr16	67807147	67828064	chr16:67807147-67828064	0	+	67807147	67807147	8553170	9	49,100,136,616,126,153,110,127,592,	0,7154,17989,18519,19289,19544,19815,20101,20325,
#Partially deleted in new
chr16	67807167	67827514	chr16:67807167-67827514	0	+	67807167	67827514	789624	11	29,100,136,170,160,131,126,153,110,127,42,	0,7134,17969,18499,18749,18984,19269,19524,19795,20081,20305,
#Partially deleted in new
chr16	67807294	67825293	chr16:67807294-67825293	0	+	67807294	67807294	8553170	4	91,100,127,157,	0,7007,13804,17842,
#Partially deleted in new
chr16	67827549	67832148	chr16:67827549-67832148	0	+	67827549	67831318	789624	4	30,190,486,110,	0,203,3619,4489,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	67828156	67847458	chr16:67828156-67847458	3	-	67828266	67833859	789624	16	234,105,177,94,324,159,143,37,137,97,88,91,351,129,121,58,	0,317,510,1266,1608,2233,3059,3419,3597,3855,4071,4298,5593,7015,7381,19244,
#Partially deleted in new
chr16	67828156	67833913	chr16:67828156-67833913	0	-	67828156	67828156	8553170	10	234,105,177,94,1594,37,137,97,318,164,	0,317,510,1266,1608,3419,3597,3855,4071,5593,
#Partially deleted in new
chr16	67828158	67833897	chr16:67828158-67833897	0	-	67828158	67828158	8553170	11	232,86,177,94,784,143,50,97,88,91,148,	0,315,508,1264,1606,3057,3682,3853,4069,4296,5591,
#Partially deleted in new
chr16	67828158	67833860	chr16:67828158-67833860	0	-	67831593	67833859	789624	13	191,70,177,94,324,159,143,37,87,97,88,91,111,	0,350,508,1264,1606,2231,3057,3417,3595,3853,4069,4296,5591,
#Partially deleted in new
chr16	67828158	67833897	chr16:67828158-67833897	0	-	67828158	67828158	8553170	12	232,105,177,94,784,143,37,137,97,88,91,148,	0,315,508,1264,1606,3057,3417,3595,3853,4069,4296,5591,
#Partially deleted in new
chr16	67828160	67835338	chr16:67828160-67835338	1	-	67828266	67833859	789624	14	230,105,177,94,324,159,143,37,137,97,88,91,351,167,	0,313,506,1262,1604,2229,3055,3415,3593,3851,4067,4294,5589,7011,
#Partially deleted in new
chr16	67828164	67833896	chr16:67828164-67833896	1	-	67832087	67833859	789624	12	226,105,177,94,324,159,143,37,137,97,91,147,	0,309,502,1258,1600,2225,3051,3411,3589,3847,4290,5585,
#Partially deleted in new
chr16	67828184	67830253	chr16:67828184-67830253	0	-	67828184	67828184	8553170	5	206,132,177,94,489,	0,289,482,1238,1580,
#Partially deleted in new
chr16	67828185	67829170	chr16:67828185-67829170	0	-	67828185	67828185	8553170	2	393,504,	0,481,
#Partially deleted in new
chr16	67828186	67833880	chr16:67828186-67833880	0	-	67828186	67828186	8553170	12	204,105,177,94,627,143,37,137,97,88,91,131,	0,287,480,1236,1735,3029,3389,3567,3825,4041,4268,5563,
#Partially deleted in new
chr16	67828208	67833918	chr16:67828208-67833918	1	-	67828266	67833859	789624	13	182,105,177,94,159,159,143,37,137,97,88,91,169,	0,265,458,1214,1721,2181,3007,3367,3545,3803,4019,4246,5541,
#Partially deleted in new
chr16	67829944	67833885	chr16:67829944-67833885	0	-	67829944	67833859	789624	7	144,159,143,97,88,91,136,	0,445,1271,2067,2283,2510,3805,
#Partially deleted in new
chr16	67829948	67833946	chr16:67829948-67833946	0	-	67829948	67829948	8553170	3	1942,534,197,	0,2063,3801,
#Partially deleted in new
chr16	67830394	67832312	chr16:67830394-67832312	0	-	67830394	67830394	8553170	6	298,143,37,137,97,85,	0,821,1181,1359,1617,1833,
#Partially deleted in new
chr16	67830904	67833938	chr16:67830904-67833938	0	-	67832087	67833859	789624	6	454,37,137,97,91,189,	0,671,849,1107,1550,2845,
#Partially deleted in new
chr16	67831215	67833943	chr16:67831215-67833943	0	-	67832245	67833859	789624	7	143,37,137,97,123,91,194,	0,360,538,796,1012,1239,2534,
#Partially deleted in new
chr16	67831219	67833929	chr16:67831219-67833929	0	-	67832087	67833859	789624	4	139,97,91,180,	0,792,1235,2530,
#Partially deleted in new
chr16	67831585	67833860	chr16:67831585-67833860	0	-	67831585	67831585	8553170	6	27,87,97,88,91,111,	0,168,426,642,869,2164,
#Partially deleted in new
chr16	67831768	67833943	chr16:67831768-67833943	0	-	67832315	67833859	789624	5	122,97,127,91,194,	0,243,459,686,1981,
#Partially deleted in new
chr16	67831793	67833931	chr16:67831793-67833931	0	-	67832080	67833859	789624	5	97,125,88,91,182,	0,218,434,661,1956,
#Partially deleted in new
chr16	67831828	67833896	chr16:67831828-67833896	0	-	67831828	67831828	8553170	4	62,125,318,147,	0,183,399,1921,
#Partially deleted in new
chr16	67832391	67834212	chr16:67832391-67834212	0	-	67832391	67832391	8553170	3	154,295,88,	0,1358,1733,
#Partially deleted in new
chr16	67832461	67847693	chr16:67832461-67847693	0	-	67832461	67833859	789624	4	84,351,124,114,	0,1288,2710,15118,
#Partially deleted in new
chr16	67832509	67847696	chr16:67832509-67847696	0	-	67832509	67833859	789624	4	36,351,129,117,	0,1240,2662,15070,
#Partially deleted in new
chr16	67833839	67843142	chr16:67833839-67843142	0	-	67833839	67833859	8553170	3	261,129,185,	0,1332,9118,
#Partially deleted in new
chr16	67833888	67847755	chr16:67833888-67847755	0	-	67833888	67833888	8553170	4	212,124,49,176,	0,1283,1649,13691,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	67833889	67843108	chr16:67833889-67843108	0	-	67833889	67833889	8553170	4	211,129,121,110,	0,1282,1648,9109,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	67833944	67843129	chr16:67833944-67843129	0	-	67833944	67833944	8553170	4	156,124,121,172,	0,1227,1593,9013,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	67833955	67847752	chr16:67833955-67847752	0	-	67833955	67833955	8553170	4	145,129,121,173,	0,1216,1582,13624,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	67833965	67846823	chr16:67833965-67846823	0	-	67833965	67833965	8553170	4	135,129,121,52,	0,1206,1572,12806,
#Partially deleted in new
chr16	67833973	67843305	chr16:67833973-67843305	0	-	67833973	67833973	8553170	3	127,124,348,	0,1198,8984,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	67834024	67843290	chr16:67834024-67843290	0	-	67834024	67834024	8553170	4	76,129,121,260,	0,1147,1513,9006,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	67834033	67847811	chr16:67834033-67847811	0	-	67834033	67834033	8553170	4	67,124,121,232,	0,1138,1504,13546,
#Partially deleted in new
chr16	67834033	67843337	chr16:67834033-67843337	0	-	67834033	67834033	8553170	3	67,129,339,	0,1138,8965,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	67835247	67841950	chr16:67835247-67841950	0	-	67835247	67835247	8553170	3	53,121,383,	0,290,6320,
#Partially deleted in new
chr16	67842081	67844195	chr16:67842081-67844195	3	+	67842554	67843499	0	1	2114,	0,
#Partially deleted in new
chr16	67846731	67872567	chr16:67846731-67872567	3	+	67865130	67870913	0	5	254,128,72,99,1768,	0,18370,21608,21769,24068,
#Partially deleted in new
chr16	67846922	67868741	chr16:67846922-67868741	0	+	67846922	67846922	8553170	3	63,128,402,	0,18179,21417,
#Partially deleted in new
chr16	67846934	67870852	chr16:67846934-67870852	0	+	67865130	67870852	789624	6	51,179,128,72,99,53,	0,343,18167,21405,21566,23865,
#Partially deleted in new
chr16	67846934	67868838	chr16:67846934-67868838	0	+	67846934	67846934	8553170	4	51,128,72,338,	0,18167,21405,21566,
#Partially deleted in new
chr16	67847160	67871323	chr16:67847160-67871323	1	+	67865130	67870913	0	5	296,128,72,99,524,	0,17941,21179,21340,23639,
#Partially deleted in new
chr16	67847210	67871323	chr16:67847210-67871323	1	+	67865130	67870913	0	5	356,128,72,99,524,	0,17891,21129,21290,23589,
#Partially deleted in new
chr16	67847341	67868496	chr16:67847341-67868496	0	+	67847341	67847341	8553170	3	115,128,157,	0,17760,20998,
#Deleted in new
chr16	67855954	67856111	chr16:67855954-67856111	7	-	67855954	67855954	16724991	1	157,	0,
#Deleted in new
chr16	67869959	67872567	chr16:67869959-67872567	0	+	67869959	67869959	8553170	1	2608,	0,
#Partially deleted in new
chr16	67873022	67884503	chr16:67873022-67884503	3	+	67873261	67884148	789624	29	321,157,112,100,190,148,105,110,84,96,103,181,73,92,188,122,154,434,105,153,37,178,156,116,166,187,220,164,548,	0,2922,3465,3850,4194,4486,4718,5143,5337,5513,5714,5934,6214,6389,6564,6827,7040,7534,8053,8242,8474,8645,8931,9189,9406,9656,9935,10545,10933,
#Partially deleted in new
chr16	67873051	67884495	chr16:67873051-67884495	0	+	67873051	67873051	8553170	28	292,100,157,112,100,190,767,84,96,103,181,73,92,188,122,154,434,105,153,37,178,156,116,166,187,220,164,540,	0,2686,2893,3436,3821,4165,4457,5308,5484,5685,5905,6185,6360,6535,6798,7011,7505,8024,8213,8445,8616,8902,9160,9377,9627,9906,10516,10904,
#Partially deleted in new
chr16	67873371	67880489	chr16:67873371-67880489	0	+	67873371	67873371	8553170	17	87,157,112,100,190,148,105,110,84,96,103,181,73,92,188,122,427,	0,2573,3116,3501,3845,4137,4369,4794,4988,5164,5365,5585,5865,6040,6215,6478,6691,
#Deleted in new
chr16	67876484	67879779	chr16:67876484-67879779	0	+	67876484	67876484	8553170	11	115,100,190,148,105,110,84,96,103,181,193,	0,388,732,1024,1256,1681,1875,2051,2252,2472,3102,
#Deleted in new
chr16	67877488	67884497	chr16:67877488-67884497	0	+	67877488	67877488	8553170	24	168,105,110,84,96,103,181,73,92,188,122,154,434,105,153,37,178,156,116,166,187,220,164,542,	0,252,677,871,1047,1248,1468,1748,1923,2098,2361,2574,3068,3587,3776,4008,4179,4465,4723,4940,5190,5469,6079,6467,
#Deleted in new
chr16	67878871	67879739	chr16:67878871-67879739	0	+	67878871	67878871	8553170	4	266,73,92,153,	0,365,540,715,
#Deleted in new
chr16	67880348	67881180	chr16:67880348-67881180	0	+	67880348	67880348	8553170	2	642,105,	0,727,
#Deleted in new
chr16	67880746	67881796	chr16:67880746-67881796	0	+	67880746	67880746	8553170	4	244,105,269,129,	0,329,518,921,
#Deleted in new
chr16	67880748	67881349	chr16:67880748-67881349	0	+	67880748	67880748	8553170	2	242,274,	0,327,
#Deleted in new
chr16	67880915	67882516	chr16:67880915-67882516	0	+	67880915	67880915	8553170	7	75,105,153,37,442,116,88,	0,160,349,581,752,1296,1513,
#Deleted in new
chr16	67882066	67882923	chr16:67882066-67882923	0	+	67882066	67882066	8553170	4	43,116,166,245,	0,145,362,612,
#Deleted in new
chr16	67882448	67884322	chr16:67882448-67884322	0	+	67882448	67884148	789624	3	146,176,258,	0,230,1616,
#Deleted in new
chr16	67882460	67886367	chr16:67882460-67886367	3	+	67882460	67882460	8553170	1	3907,	0,
#Deleted in new
chr16	67882486	67884165	chr16:67882486-67884165	0	+	67882486	67884148	789624	3	108,164,210,	0,1081,1469,
#Deleted in new
chr16	67882779	67884123	chr16:67882779-67884123	0	+	67882779	67884123	789624	5	86,49,63,164,168,	0,178,335,788,1176,
#Deleted in new
chr16	67884804	67886372	chr16:67884804-67886372	3	+	67884903	67886259	789624	3	178,133,399,	0,917,1169,
#Partially deleted in new
chr16	67884907	67888855	chr16:67884907-67888855	0	+	67884907	67888724	789624	3	75,133,189,	0,814,3759,
#Deleted in new
chr16	67885568	67886368	chr16:67885568-67886368	1	+	67885981	67886245	789624	2	286,395,	0,405,
#Partially deleted in new
chr16	67893271	67929678	chr16:67893271-67929678	3	+	67908749	67927642	789624	3	100,1027,2354,	0,15408,34053,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	67893271	67910088	chr16:67893271-67910088	1	+	67908749	67909811	789624	2	100,1409,	0,15408,
#Partially deleted in new
chr16	67893300	67903145	chr16:67893300-67903145	0	+	67893300	67893300	8553170	2	71,114,	0,9731,
#Deleted in new
chr16	67927639	67929674	chr16:67927639-67929674	0	-	67927639	67927639	8553170	2	174,183,	0,1852,
#Deleted in new
chr16	67929569	67932414	chr16:67929569-67932414	3	-	67929933	67931852	789624	7	526,134,181,82,80,104,614,	0,615,838,1156,1350,1528,2231,
#Deleted in new
chr16	67929578	67932365	chr16:67929578-67932365	0	-	67929578	67929578	8553170	5	517,134,181,82,1446,	0,606,829,1147,1341,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	67929613	67936017	chr16:67929613-67936017	0	-	67929613	67929613	8553170	6	705,181,3946,682,116,55,	0,794,1112,5183,5968,6349,
#Deleted in new
chr16	67929897	67931485	chr16:67929897-67931485	0	-	67929897	67929897	8553170	5	198,134,181,82,566,	0,287,510,828,1022,
#Deleted in new
chr16	67929951	67931862	chr16:67929951-67931862	0	-	67929951	67931852	789624	6	131,123,82,80,104,62,	0,514,774,968,1146,1849,
#Deleted in new
chr16	67930035	67931862	chr16:67930035-67931862	0	-	67930035	67931852	789624	6	60,134,181,63,80,62,	0,149,372,645,884,1765,
#Deleted in new
chr16	67930736	67932113	chr16:67930736-67932113	0	-	67930736	67930736	8553170	3	71,80,313,	0,183,1064,
#Partially deleted in new
chr16	67930924	67935641	chr16:67930924-67935641	3	-	67935305	67935641	789624	5	75,103,152,183,60,	0,3644,3872,4371,4657,
#Deleted in new
chr16	67930974	67931674	chr16:67930974-67931674	0	-	67930974	67930974	8553170	2	25,577,	0,123,
#Deleted in new
chr16	67934501	67937087	chr16:67934501-67937087	3	-	67934559	67936749	0	8	170,152,59,116,141,98,88,394,	0,295,918,1080,1461,1713,1896,2192,
#Deleted in new
chr16	67934505	67935795	chr16:67934505-67935795	0	-	67934505	67934505	8553170	4	166,152,59,214,	0,291,914,1076,
#Deleted in new
chr16	67934505	67935985	chr16:67934505-67935985	0	-	67934627	67935985	789624	5	189,152,59,116,23,	0,291,914,1076,1457,
#Deleted in new
chr16	67935327	67936847	chr16:67935327-67936847	0	-	67935327	67935327	8553170	5	370,141,98,88,154,	0,635,887,1070,1366,
#Deleted in new
chr16	67935548	67936864	chr16:67935548-67936864	0	-	67935548	67935548	8553170	3	149,350,467,	0,414,849,
#Partially deleted in new
chr16	67939749	67944131	chr16:67939749-67944131	3	-	67939903	67944101	0	6	729,225,96,116,157,184,	0,2613,2921,3111,3306,4198,
#Partially deleted in new
chr16	67939881	67943094	chr16:67939881-67943094	0	-	67939907	67943094	789624	3	193,116,39,	0,2979,3174,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	67939881	67942930	chr16:67939881-67942930	0	-	67940805	67942930	789624	5	597,95,225,96,70,	0,855,2481,2789,2979,
#Partially deleted in new
chr16	67940245	67943625	chr16:67940245-67943625	0	-	67940245	67943150	789624	5	233,225,96,116,570,	0,2117,2425,2615,2810,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	67941367	67944131	chr16:67941367-67944131	0	-	67943061	67944101	789624	6	87,225,96,116,134,184,	0,995,1303,1493,1688,2580,
#Deleted in new
chr16	67941808	67942577	chr16:67941808-67942577	0	-	67941926	67942577	789624	2	144,215,	0,554,
#Deleted in new
chr16	67941816	67942458	chr16:67941816-67942458	0	-	67941952	67942458	789624	2	226,96,	0,546,
#Deleted in new
chr16	67942156	67942901	chr16:67942156-67942901	0	-	67942156	67942156	8553170	3	431,96,41,	0,514,704,
#Deleted in new
chr16	67942398	67943144	chr16:67942398-67943144	0	-	67942398	67942398	8553170	3	368,116,89,	0,462,657,
#Partially deleted in new
chr16	67943473	67968694	chr16:67943473-67968694	3	-	67944839	67968553	789624	24	1458,134,185,108,132,170,196,169,105,120,99,119,175,58,99,165,215,242,131,55,147,132,95,256,	0,1613,1895,2290,2477,2697,2964,3463,3857,4195,4587,6326,6845,7180,7488,7666,8349,8710,11169,14268,14424,18101,19991,24965,
#Partially deleted in new
chr16	67943473	67968694	chr16:67943473-67968694	1	-	67944839	67968654	789624	23	1458,134,185,108,132,170,196,169,105,120,99,119,175,58,99,165,215,242,131,55,147,132,256,	0,1613,1895,2290,2477,2697,2964,3463,3857,4195,4587,6326,6845,7180,7488,7666,8349,8710,11169,14268,14424,18101,24965,
#Partially deleted in new
chr16	67944413	67968584	chr16:67944413-67968584	1	-	67944839	67968504	789624	23	518,134,185,108,132,170,196,169,105,120,99,119,175,58,99,165,215,242,131,55,147,132,146,	0,673,955,1350,1537,1757,2024,2523,2917,3255,3647,5386,5905,6240,6548,6726,7409,7770,10229,13328,13484,17161,24025,
#Partially deleted in new
chr16	67944481	67966878	chr16:67944481-67966878	1	-	67944839	67966774	789624	24	450,134,185,108,132,170,196,169,105,120,99,119,175,58,99,165,215,242,131,55,147,132,95,126,	0,605,887,1282,1469,1689,1956,2455,2849,3187,3579,5318,5837,6172,6480,6658,7341,7702,10161,13260,13416,17093,18983,22271,
#Partially deleted in new
chr16	67944484	67968553	chr16:67944484-67968553	0	-	67944484	67944484	8553170	23	447,467,108,132,170,196,169,105,120,99,119,175,58,99,165,215,242,131,55,147,132,95,115,	0,602,1279,1466,1686,1953,2452,2846,3184,3576,5315,5834,6169,6477,6655,7338,7699,10158,13257,13413,17090,18980,23954,
#Partially deleted in new
chr16	67944484	67968553	chr16:67944484-67968553	1	-	67945045	67968553	789624	23	736,185,108,132,170,196,169,105,120,99,119,175,58,99,165,215,242,131,55,147,132,95,115,	0,884,1279,1466,1686,1953,2452,2846,3184,3576,5315,5834,6169,6477,6655,7338,7699,10158,13257,13413,17090,18980,23954,
#Partially deleted in new
chr16	67944592	67964065	chr16:67944592-67964065	1	-	67944839	67964027	789624	24	339,134,185,108,132,170,196,169,105,120,99,119,175,58,99,165,215,242,131,55,147,132,95,135,	0,494,776,1171,1358,1578,1845,2344,2738,3076,3468,5207,5726,6061,6369,6547,7230,7591,10050,13149,13305,16982,18872,19338,
#Deleted in new
chr16	67944737	67945405	chr16:67944737-67945405	0	-	67945239	67945405	789624	3	194,175,37,	0,349,631,
#Deleted in new
chr16	67945544	67947105	chr16:67945544-67947105	0	-	67946238	67947105	789624	5	9,108,132,170,169,	0,219,406,626,1392,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	67947100	67968654	chr16:67947100-67968654	0	-	67947100	67947100	8553170	16	5,105,120,99,119,175,407,165,215,242,131,55,147,132,1316,216,	0,230,568,960,2699,3218,3553,4039,4722,5083,7542,10641,10797,14474,15143,21338,
#Partially deleted in new
chr16	67948060	67950112	chr16:67948060-67950112	0	-	67948060	67948060	8553170	2	99,313,	0,1739,
#Deleted in new
chr16	67949570	67950421	chr16:67949570-67950421	0	-	67949570	67949570	8553170	2	210,363,	0,488,
#Deleted in new
chr16	67949798	67951534	chr16:67949798-67951534	0	-	67949798	67949798	8553170	5	120,175,58,99,395,	0,520,855,1163,1341,
#Deleted in new
chr16	67949906	67951467	chr16:67949906-67951467	0	-	67949906	67949906	8553170	3	12,175,328,	0,412,1233,
#Deleted in new
chr16	67950368	67951929	chr16:67950368-67951929	0	-	67950368	67950368	8553170	4	125,58,343,107,	0,285,593,1454,
#Partially deleted in new
chr16	67950992	67968616	chr16:67950992-67968616	0	-	67952375	67968553	789624	5	68,165,215,242,178,	0,147,830,1191,17446,
#Partially deleted in new
chr16	67952215	67969601	chr16:67952215-67969601	0	-	67952215	67958035	789624	7	210,131,55,147,132,95,121,	0,2427,5526,5682,9359,11249,17265,
#Partially deleted in new
chr16	67952241	67969192	chr16:67952241-67969192	0	-	67952241	67952241	8553170	8	184,116,131,55,147,132,123,128,	0,1862,2401,5500,5656,9333,11195,16823,
#Partially deleted in new
chr16	67957528	67968469	chr16:67957528-67968469	0	-	67957528	67957528	8553170	5	268,147,132,95,31,	0,369,4046,5936,10910,
#Partially deleted in new
chr16	67975662	67980829	chr16:67975662-67980829	3	-	67975764	67980455	789624	10	339,136,76,85,177,70,142,130,127,736,	0,430,1037,1607,1990,2275,2604,2834,3976,4431,
#Partially deleted in new
chr16	67978572	67980508	chr16:67978572-67980508	0	-	67978572	67978572	8553170	2	54,415,	0,1521,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	67987396	68000586	chr16:67987396-68000586	0	-	67990894	67993212	789624	12	364,206,76,85,119,70,142,130,127,308,482,139,	0,455,1926,2650,3424,3718,4441,4667,5113,5553,11870,13051,
#Partially deleted in new
chr16	67987505	67993863	chr16:67987505-67993863	1	-	67987505	67993212	789624	10	255,136,76,85,177,70,142,130,127,914,	0,346,1817,2541,3315,3609,4332,4558,5004,5444,
#Partially deleted in new
chr16	67987745	68053655	chr16:67987745-68053655	0	+	68038023	68053655	789624	5	208,80,144,46,92,	0,37669,50260,61759,65818,
#Partially deleted in new
chr16	67987771	68056424	chr16:67987771-68056424	0	+	68038023	68056424	789624	6	182,144,46,92,44,61,	0,50234,61733,65792,66802,68592,
#Partially deleted in new
chr16	67990048	68000564	chr16:67990048-68000564	0	-	67990048	68000485	789624	4	83,177,70,117,	0,772,1066,10399,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	67990897	67999512	chr16:67990897-67999512	0	-	67990897	67999416	789624	5	100,70,142,130,138,	0,217,940,1166,8477,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	67991642	68000581	chr16:67991642-68000581	0	-	67991642	67991642	8553170	3	551,308,134,	0,1307,8805,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	67992172	67999518	chr16:67992172-67999518	0	-	67992172	67993212	789624	4	21,127,308,123,	0,337,777,7223,
#Deleted in new
chr16	67992556	67994328	chr16:67992556-67994328	0	-	67992556	67993212	789624	3	80,308,171,	0,393,1601,
#Partially deleted in new
chr16	67992816	68000568	chr16:67992816-68000568	0	-	67992816	67992816	8553170	2	441,121,	0,7631,
#Partially deleted in new
chr16	67994785	68066373	chr16:67994785-68066373	0	+	68038023	68066373	789624	8	78,144,46,92,44,61,48,57,	0,43220,54719,58778,59788,61578,66280,71531,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	68002431	68004952	chr16:68002431-68004952	7	-	68002431	68002431	16724991	4	876,300,234,94,	0,1234,1777,2427,
#Partially deleted in new
chr16	68013435	68015911	chr16:68013435-68015911	3	-	68014107	68015770	789624	2	977,208,	0,2268,
#Partially deleted in new
chr16	68015918	68053612	chr16:68015918-68053612	0	+	68038023	68053612	789624	4	332,144,46,49,	0,22087,33586,37645,
#Partially deleted in new
chr16	68016150	68056401	chr16:68016150-68056401	0	+	68038023	68056401	789624	7	100,80,144,46,92,44,38,	0,9264,21855,33354,37413,38423,40213,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	68017709	68017817	chr16:68017709-68017817	3	-	68017709	68017709	8553170	1	108,	0,
#Partially deleted in new
chr16	68021273	68023442	chr16:68021273-68023442	3	-	68021579	68023202	789624	1	2169,	0,
#Partially deleted in new
chr16	68022955	68079320	chr16:68022955-68079320	3	+	68038023	68078986	0	17	396,80,144,46,92,44,61,48,66,71,87,169,122,150,88,74,572,	0,2459,15050,26549,30608,31618,33408,38110,43361,43610,47178,47984,51078,52399,53676,55489,55793,
#Partially deleted in new
chr16	68023252	68079320	chr16:68023252-68079320	1	+	68038023	68078986	0	16	99,144,46,92,44,61,48,66,71,87,169,122,150,88,74,572,	0,14753,26252,30311,31321,33111,37813,43064,43313,46881,47687,50781,52102,53379,55192,55496,
#Partially deleted in new
chr16	68023260	68054035	chr16:68023260-68054035	0	+	68023260	68023260	8553170	5	91,80,144,46,472,	0,2154,14745,26244,30303,
#Partially deleted in new
chr16	68023264	68056376	chr16:68023264-68056376	0	+	68038023	68056376	789624	7	87,114,144,46,92,44,13,	0,2116,14741,26240,30299,31309,33099,
#Partially deleted in new
chr16	68023283	68053635	chr16:68023283-68053635	0	+	68038023	68053635	789624	6	68,157,80,144,46,72,	0,564,2131,14722,26221,30280,
#Partially deleted in new
chr16	68023291	68079315	chr16:68023291-68079315	1	+	68038023	68078986	789624	15	60,80,144,46,92,48,66,71,87,169,122,150,88,74,567,	0,2123,14714,26213,30272,37774,43025,43274,46842,47648,50742,52063,53340,55153,55457,
#Partially deleted in new
chr16	68023322	68038146	chr16:68023322-68038146	0	+	68038023	68038146	789624	4	29,80,123,141,	0,2092,3637,14683,
#Partially deleted in new
chr16	68023328	68049533	chr16:68023328-68049533	0	+	68038023	68049533	789624	4	287,80,144,29,	0,2086,14677,26176,
#Partially deleted in new
chr16	68037912	68070204	chr16:68037912-68070204	0	+	68038023	68070204	789624	9	237,46,92,44,61,48,66,71,71,	0,11592,15651,16661,18451,23153,28404,28653,32221,
#Partially deleted in new
chr16	68038003	68079242	chr16:68038003-68079242	0	+	68038023	68056365	789624	14	146,92,44,61,48,66,71,87,169,122,150,88,74,494,	0,15560,16570,18360,23062,28313,28562,32130,32936,36030,37351,38628,40441,40745,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	68077339	68122271	chr16:68077339-68122271	3	+	68077339	68077339	8553170	3	190,74,285,	0,1105,44647,
#Deleted in new
chr16	68077951	68078866	chr16:68077951-68078866	0	+	68077951	68077951	8553170	2	567,118,	0,797,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	68084750	68192212	chr16:68084750-68192212	0	+	68084750	68084750	8553170	9	430,1135,163,200,173,141,56,127,1445,	0,37236,41697,73118,82092,89623,96724,98489,106017,
#Partially deleted in new
chr16	68084750	68226934	chr16:68084750-68226934	0	+	68084750	68084750	8553170	11	430,1135,163,200,173,141,56,127,1008,104,585,	0,37236,41697,73118,82092,89623,96724,98489,106017,129578,141599,
#Partially deleted in new
chr16	68084750	68226471	chr16:68084750-68226471	0	+	68084750	68084750	8553170	10	430,1135,163,200,173,141,56,127,1008,122,	0,37236,41697,73118,82092,89623,96724,98489,106017,141599,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	68084777	68192212	chr16:68084777-68192212	0	+	68084777	68084777	8553170	9	148,1135,163,200,173,141,56,127,1445,	0,37209,41670,73091,82065,89596,96697,98462,105990,
#Partially deleted in new
chr16	68084777	68226934	chr16:68084777-68226934	0	+	68084777	68084777	8553170	11	148,1135,163,200,173,141,56,127,1008,104,585,	0,37209,41670,73091,82065,89596,96697,98462,105990,129551,141572,
#Partially deleted in new
chr16	68084838	68167015	chr16:68084838-68167015	0	+	68084838	68084838	8553170	3	342,200,173,	0,73030,82004,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	68085343	68218090	chr16:68085343-68218090	1	+	68085681	68217748	789624	10	441,1135,163,200,173,141,56,127,1008,380,	0,36643,41104,72525,81499,89030,96131,97896,105424,132367,
#Partially deleted in new
chr16	68085365	68167015	chr16:68085365-68167015	0	+	68085681	68157882	789624	3	419,200,173,	0,72503,81477,
#Partially deleted in new
chr16	68085388	68174514	chr16:68085388-68174514	0	+	68085681	68157882	789624	3	396,200,141,	0,72480,88985,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	68085440	68192210	chr16:68085440-68192210	0	+	68085681	68157882	789624	7	344,200,173,141,56,127,1443,	0,72428,81402,88933,96034,97799,105327,
#Partially deleted in new
chr16	68085445	68158073	chr16:68085445-68158073	0	+	68085681	68126470	789624	3	339,163,205,	0,41002,72423,
#Partially deleted in new
chr16	68085457	68229258	chr16:68085457-68229258	1	+	68085681	68226352	0	11	327,1135,163,200,173,141,56,127,1008,89,2909,	0,36529,40990,72411,81385,88916,96017,97782,105310,135738,140892,
#Partially deleted in new
chr16	68085657	68229259	chr16:68085657-68229259	1	+	68085681	68214429	0	11	127,1135,163,200,173,141,56,127,1008,104,2910,	0,36329,40790,72211,81185,88716,95817,97582,105110,128671,140692,
#Partially deleted in new
chr16	68085657	68229259	chr16:68085657-68229259	3	+	68085681	68226471	0	10	127,1135,163,200,173,141,56,127,1008,2910,	0,36329,40790,72211,81185,88716,95817,97582,105110,140692,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	68085657	68192228	chr16:68085657-68192228	0	+	68085657	68085657	8553170	9	127,1135,163,200,173,141,56,127,1461,	0,36329,40790,72211,81185,88716,95817,97582,105110,
#Partially deleted in new
chr16	68085860	68226934	chr16:68085860-68226934	0	+	68085860	68214429	789624	11	56,1135,163,200,173,141,56,127,1008,104,585,	0,36126,40587,72008,80982,88513,95614,97379,104907,128468,140489,
#Partially deleted in new
chr16	68085860	68226471	chr16:68085860-68226471	0	+	68085860	68226471	789624	10	56,1135,163,200,173,141,56,127,1008,122,	0,36126,40587,72008,80982,88513,95614,97379,104907,140489,
#Partially deleted in new
chr16	68086637	68226934	chr16:68086637-68226934	0	+	68086637	68086637	8553170	11	61,1135,163,200,173,141,56,127,1008,104,585,	0,35349,39810,71231,80205,87736,94837,96602,104130,127691,139712,
#Partially deleted in new
chr16	68086637	68226471	chr16:68086637-68226471	0	+	68086637	68086637	8553170	10	61,1135,163,200,173,141,56,127,1008,122,	0,35349,39810,71231,80205,87736,94837,96602,104130,139712,
#Partially deleted in new
chr16	68086700	68226934	chr16:68086700-68226934	0	+	68086700	68086700	8553170	11	98,1135,163,200,173,141,56,127,1008,104,585,	0,35286,39747,71168,80142,87673,94774,96539,104067,127628,139649,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	68088700	68226934	chr16:68088700-68226934	0	+	68088700	68088700	8553170	11	502,1135,163,200,173,141,56,127,1008,104,585,	0,33286,37747,69168,78142,85673,92774,94539,102067,125628,137649,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	68089448	68089543	chr16:68089448-68089543	3	-	68089448	68089448	8553170	1	95,	0,
#Partially deleted in new
chr16	68123029	68138784	chr16:68123029-68138784	0	+	68123029	68138759	789624	3	92,163,274,	0,3418,15481,
#Deleted in new
chr16	68189286	68189421	chr16:68189286-68189421	3	+	68189286	68189286	8553170	1	135,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	68199794	68200981	chr16:68199794-68200981	3	+	68199794	68199794	8553170	1	1187,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	68199840	68200981	chr16:68199840-68200981	3	-	68199840	68199840	8553170	1	1141,	0,
#Deleted in new
chr16	68209441	68209778	chr16:68209441-68209778	7	+	68209441	68209441	16724991	1	337,	0,
#Partially deleted in new
chr16	68212400	68221671	chr16:68212400-68221671	3	-	68212400	68212400	8553170	2	237,223,	0,9048,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	68224712	68227734	chr16:68224712-68227734	3	+	68224712	68224712	8553170	1	3022,	0,
#Deleted in new
chr16	68225968	68229145	chr16:68225968-68229145	3	-	68225968	68225968	8553170	1	3177,	0,
#Partially deleted in new
chr16	68229110	68236132	chr16:68229110-68236132	1	-	68230225	68236045	789624	15	1205,166,187,199,213,302,43,133,141,55,99,115,114,129,285,	0,1278,1730,2067,2371,2691,3135,3260,3466,3650,4216,4657,4883,6523,6737,
#Partially deleted in new
chr16	68229116	68236070	chr16:68229116-68236070	0	-	68229116	68229116	8553170	13	1199,166,187,199,213,302,43,239,99,115,114,129,223,	0,1272,1724,2061,2365,2685,3129,3460,4210,4651,4877,6517,6731,
#Partially deleted in new
chr16	68229125	68236584	chr16:68229125-68236584	3	-	68230225	68236045	789624	15	1190,166,187,199,213,302,43,133,111,55,99,115,114,129,737,	0,1263,1715,2052,2356,2676,3120,3245,3451,3635,4201,4642,4868,6508,6722,
#Deleted in new
chr16	68229401	68232815	chr16:68229401-68232815	0	-	68232257	68232815	789624	9	914,166,187,81,213,302,43,111,55,	0,987,1439,1894,2080,2400,2844,3175,3359,
#Deleted in new
chr16	68231966	68232506	chr16:68231966-68232506	0	-	68231966	68231966	8553170	2	137,261,	0,279,
#Partially deleted in new
chr16	68232540	68234170	chr16:68232540-68234170	0	-	68232540	68232540	8553170	5	144,55,99,115,177,	0,220,786,1227,1453,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	68233171	68235003	chr16:68233171-68235003	0	-	68233171	68233171	8553170	3	254,115,1010,	0,596,822,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	68233198	68235749	chr16:68233198-68235749	0	-	68233198	68233198	8553170	4	227,115,114,116,	0,569,795,2435,
#Deleted in new
chr16	68233337	68234164	chr16:68233337-68234164	0	-	68233337	68233337	8553170	2	545,171,	0,656,
#Deleted in new
chr16	68233337	68235708	chr16:68233337-68235708	0	-	68233337	68233337	8553170	3	545,114,75,	0,656,2296,
#Deleted in new
chr16	68233356	68238067	chr16:68233356-68238067	0	-	68233356	68234056	789624	6	69,115,114,129,32,133,	0,411,637,2277,2491,4578,
#Deleted in new
chr16	68233425	68233499	chr16:68233425-68233499	3	-	68233425	68233425	5263520	1	74,	0,
#Deleted in new
chr16	68233815	68238102	chr16:68233815-68238102	0	-	68233815	68234056	789624	4	67,114,129,168,	0,178,1818,4119,
#Deleted in new
chr16	68236844	68237667	chr16:68236844-68237667	3	-	68236844	68236844	8553170	2	18,515,	0,308,
#Partially deleted in new
chr16	68245303	68259923	chr16:68245303-68259923	1	+	68245426	68259657	0	5	250,119,99,100,778,	0,9615,9978,10587,13842,
#Partially deleted in new
chr16	68245340	68255853	chr16:68245340-68255853	0	+	68245426	68255853	789624	4	213,157,119,88,	0,3949,9578,10425,
#Partially deleted in new
chr16	68245343	68261062	chr16:68245343-68261062	3	+	68245426	68259657	0	6	210,157,119,99,225,1917,	0,3946,9575,9938,10422,13802,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	68245370	68255038	chr16:68245370-68255038	0	+	68245426	68249299	789624	4	183,124,157,120,	0,3198,3919,9548,
#Partially deleted in new
chr16	68245372	68259907	chr16:68245372-68259907	1	+	68245426	68259657	789624	2	181,762,	0,13773,
#Partially deleted in new
chr16	68245372	68259692	chr16:68245372-68259692	1	+	68245426	68259254	789624	6	181,157,119,99,100,547,	0,3917,9546,9909,10518,13773,
#Partially deleted in new
chr16	68245379	68255403	chr16:68245379-68255403	0	+	68245379	68245379	8553170	4	174,157,119,122,	0,3910,9539,9902,
#Partially deleted in new
chr16	68245391	68259252	chr16:68245391-68259252	0	+	68245426	68259252	789624	6	162,157,119,99,285,107,	0,3898,9527,9890,10314,13754,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	68248286	68249424	chr16:68248286-68249424	0	+	68248286	68248286	8553170	2	406,135,	0,1003,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	68254352	68255931	chr16:68254352-68255931	0	+	68254352	68254352	8553170	3	685,99,166,	0,929,1413,
#Partially deleted in new
chr16	68254780	68261056	chr16:68254780-68261056	0	+	68254780	68254780	8553170	2	1210,1911,	0,4365,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	68264515	68301823	chr16:68264515-68301823	1	+	68274726	68291249	789624	10	61,129,559,126,124,104,97,150,184,4590,	0,2077,10175,23230,26693,27042,30189,31848,32111,32718,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	68264529	68301819	chr16:68264529-68301819	3	+	68274726	68297328	789624	11	47,129,559,126,145,124,104,97,150,184,4586,	0,2063,10161,23216,25866,26679,27028,30175,31834,32097,32704,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	68264547	68301819	chr16:68264547-68301819	0	+	68274726	68291249	789624	11	29,129,559,126,124,104,97,150,184,243,3329,	0,2045,10143,23198,26661,27010,30157,31816,32079,32686,33943,
#Partially deleted in new
chr16	68264581	68274948	chr16:68264581-68274948	0	+	68274726	68274948	789624	3	160,129,258,	0,2011,10109,
#Partially deleted in new
chr16	68265515	68274798	chr16:68265515-68274798	0	+	68274726	68274798	789624	3	258,127,108,	0,1079,9175,
#Partially deleted in new
chr16	68266590	68291658	chr16:68266590-68291658	0	+	68274726	68287754	789624	5	131,559,113,126,101,	0,8100,20732,21155,24967,
#Partially deleted in new
chr16	68274868	68291578	chr16:68274868-68291578	0	+	68274868	68291210	789624	3	381,124,21,	0,16340,16689,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	68284222	68284318	chr16:68284222-68284318	3	-	68284222	68284222	8553170	1	96,	0,
#Partially deleted in new
chr16	68284502	68304131	chr16:68284502-68304131	0	-	68302497	68304131	789624	3	193,129,106,	0,17878,19523,
#Partially deleted in new
chr16	68287759	68294907	chr16:68287759-68294907	0	+	68287759	68291249	789624	4	112,124,104,203,	0,3449,3798,6945,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	68290086	68292790	chr16:68290086-68292790	3	-	68290086	68290086	8553170	1	2704,	0,
#Partially deleted in new
chr16	68290961	68294801	chr16:68290961-68294801	0	+	68290961	68290961	8553170	3	371,104,97,	0,596,3743,
#Partially deleted in new
chr16	68291285	68294747	chr16:68291285-68294747	0	+	68291285	68291285	8553170	2	376,43,	0,3419,
#Partially deleted in new
chr16	68294677	68297433	chr16:68294677-68297433	0	+	68294677	68294677	8553170	4	124,150,184,200,	0,1686,1949,2556,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	68298034	68310945	chr16:68298034-68310945	3	-	68301274	68310926	789624	5	3371,121,207,279,211,	0,4346,5991,12300,12700,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	68298165	68310946	chr16:68298165-68310946	0	-	68298165	68298165	8553170	4	3240,121,207,612,	0,4215,5860,12169,
#Partially deleted in new
chr16	68301999	68304229	chr16:68301999-68304229	0	-	68302345	68304229	789624	2	502,204,	0,2026,
#Partially deleted in new
chr16	68303689	68310822	chr16:68303689-68310822	0	-	68303971	68310822	789624	3	543,279,88,	0,6645,7045,
#Partially deleted in new
chr16	68310973	68337571	chr16:68310973-68337571	0	+	68315979	68329108	789624	6	126,178,37,150,109,113,	0,4923,10452,13709,18092,26485,
#Partially deleted in new
chr16	68310973	68324790	chr16:68310973-68324790	0	+	68315979	68324790	789624	5	126,135,178,37,108,	0,1068,4923,10452,13709,
#Partially deleted in new
chr16	68311015	68324766	chr16:68311015-68324766	0	+	68315979	68324766	789624	5	84,85,150,37,84,	0,4549,4909,10410,13667,
#Partially deleted in new
chr16	68311039	68339486	chr16:68311039-68339486	0	+	68315979	68339486	789624	7	207,178,37,150,109,113,165,	0,4857,10386,13643,18026,26419,28282,
#Partially deleted in new
chr16	68311049	68337521	chr16:68311049-68337521	0	+	68315979	68324689	789624	5	62,178,150,109,63,	0,4847,13633,18016,26409,
#Partially deleted in new
chr16	68311053	68346280	chr16:68311053-68346280	0	+	68311053	68311053	8553170	6	46,113,242,181,128,136,	0,26405,28268,28734,34621,35091,
#Partially deleted in new
chr16	68311055	68357259	chr16:68311055-68357259	1	+	68315979	68357224	789624	17	44,178,37,109,113,242,181,128,136,84,48,90,162,75,161,97,206,	0,4841,10370,18010,26403,28266,28732,34619,35089,36155,36575,37286,41192,42436,44667,45645,45998,
#Partially deleted in new
chr16	68311055	68339326	chr16:68311055-68339326	0	+	68315979	68339326	789624	7	56,178,37,150,109,113,5,	0,4841,10370,13627,18010,26403,28266,
#Partially deleted in new
chr16	68311062	68339963	chr16:68311062-68339963	0	+	68311062	68311062	8553170	8	49,135,37,150,109,113,242,176,	0,979,10363,13620,18003,26396,28259,28725,
#Partially deleted in new
chr16	68311063	68352660	chr16:68311063-68352660	0	+	68311063	68311063	8553170	11	36,178,37,150,109,113,242,181,128,136,413,	0,4833,10362,13619,18002,26395,28258,28724,34611,35081,41184,
#Partially deleted in new
chr16	68311067	68339968	chr16:68311067-68339968	0	+	68315979	68324689	789624	7	32,178,150,109,113,242,181,	0,4829,13615,17998,26391,28254,28720,
#Partially deleted in new
chr16	68311069	68339945	chr16:68311069-68339945	0	+	68311069	68311069	8553170	7	30,37,150,109,113,242,158,	0,10356,13613,17996,26389,28252,28718,
#Partially deleted in new
chr16	68311113	68315957	chr16:68311113-68315957	0	+	68311113	68311113	8553170	3	392,135,61,	0,928,4783,
#Partially deleted in new
chr16	68311133	68358553	chr16:68311133-68358553	3	+	68315979	68357224	789624	19	612,135,178,37,150,109,113,242,181,128,136,84,48,90,162,75,161,97,1500,	0,908,4763,10292,13549,17932,26325,28188,28654,34541,35011,36077,36497,37208,41114,42358,44589,45567,45920,
#Partially deleted in new
chr16	68315194	68357259	chr16:68315194-68357259	0	+	68315979	68353523	789624	17	880,37,150,109,113,242,181,128,136,84,48,90,162,172,161,97,206,	0,6231,9488,13871,22264,24127,24593,30480,30950,32016,32436,33147,37053,38200,40528,41506,41859,
#Partially deleted in new
chr16	68315841	68337525	chr16:68315841-68337525	0	+	68315841	68315841	8553170	4	233,37,150,67,	0,5584,8841,21617,
#Partially deleted in new
chr16	68315879	68329226	chr16:68315879-68329226	0	+	68315879	68315879	8553170	4	195,37,150,161,	0,5546,8803,13186,
#Partially deleted in new
chr16	68315895	68357265	chr16:68315895-68357265	1	+	68315979	68357224	789624	17	179,37,150,109,113,242,181,128,136,84,48,90,162,75,161,97,212,	0,5530,8787,13170,21563,23426,23892,29779,30249,31315,31735,32446,36352,37596,39827,40805,41158,
#Partially deleted in new
chr16	68315950	68324865	chr16:68315950-68324865	0	+	68315950	68315950	8553170	3	124,37,183,	0,5475,8732,
#Partially deleted in new
chr16	68315978	68321711	chr16:68315978-68321711	0	+	68315978	68315978	8553170	2	96,286,	0,5447,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	68316800	68319036	chr16:68316800-68319036	3	+	68316800	68316800	8553170	2	135,293,	0,1943,
#Partially deleted in new
chr16	68323688	68329159	chr16:68323688-68329159	0	+	68323688	68323688	8553170	3	567,26,94,	0,1118,5377,
#Partially deleted in new
chr16	68323982	68358563	chr16:68323982-68358563	0	+	68323982	68323982	8553170	10	850,242,181,128,136,162,75,161,97,1510,	0,15339,15805,21692,22162,28265,29509,31740,32718,33071,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	68324698	68328510	chr16:68324698-68328510	0	+	68324698	68324698	8553170	2	134,406,	0,3406,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	68329386	68329529	chr16:68329386-68329529	3	-	68329386	68329386	8553170	1	143,	0,
#Deleted in new
chr16	68346120	68348433	chr16:68346120-68348433	0	+	68346120	68346120	8553170	4	160,84,48,92,	0,1090,1510,2221,
#Partially deleted in new
chr16	68348406	68352056	chr16:68348406-68352056	0	+	68348406	68348406	8553170	2	25,667,	0,2983,
#Partially deleted in new
chr16	68352068	68356749	chr16:68352068-68356749	0	+	68352068	68352068	8553170	4	341,75,161,49,	0,1423,3654,4632,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	68354328	68357249	chr16:68354328-68357249	0	+	68354328	68354328	8553170	3	1555,97,196,	0,2372,2725,
#Partially deleted in new
chr16	68358324	68448688	chr16:68358324-68448688	3	-	68361205	68372181	0	9	2983,157,64,90,156,76,1529,62,336,	0,3278,5171,5452,6426,6692,12534,28273,90028,
#Partially deleted in new
chr16	68360537	68371005	chr16:68360537-68371005	0	-	68361670	68371005	789624	6	1222,64,90,156,76,147,	0,2958,3239,4213,4479,10321,
#Partially deleted in new
chr16	68361126	68372258	chr16:68361126-68372258	1	-	68361205	68372181	789624	7	181,106,64,90,156,76,1400,	0,476,2369,2650,3624,3890,9732,
#Partially deleted in new
chr16	68361133	68372258	chr16:68361133-68372258	1	-	68361205	68372181	0	7	174,157,64,66,156,76,1400,	0,469,2362,2667,3617,3883,9725,
#Deleted in new
chr16	68361298	68363693	chr16:68361298-68363693	0	-	68361298	68361298	8553170	2	410,198,	0,2197,
#Partially deleted in new
chr16	68363741	68371031	chr16:68363741-68371031	0	-	68363741	68363741	8553170	4	125,156,76,173,	0,1009,1275,7117,
#Partially deleted in new
chr16	68364413	68371031	chr16:68364413-68371031	0	-	68364413	68364413	8553170	4	181,156,76,173,	0,337,603,6445,
#Partially deleted in new
chr16	68364579	68371031	chr16:68364579-68371031	0	-	68364579	68364579	8553170	3	327,76,173,	0,437,6279,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	68367324	68370262	chr16:68367324-68370262	3	-	68367324	68367324	8553170	1	2938,	0,
#Partially deleted in new
chr16	68367451	68371009	chr16:68367451-68371009	0	-	68367451	68367451	8553170	2	395,151,	0,3407,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	68368854	68371080	chr16:68368854-68371080	0	-	68368854	68368854	8553170	2	360,222,	0,2004,
#Partially deleted in new
chr16	68370973	68448442	chr16:68370973-68448442	0	-	68370973	68370973	8553170	5	119,96,157,62,90,	0,1318,11071,15624,77379,
#Partially deleted in new
chr16	68371900	68448492	chr16:68371900-68448492	0	-	68371900	68372181	789624	2	487,140,	0,76452,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	68450282	68452318	chr16:68450282-68452318	3	+	68450282	68450282	8553170	1	2036,	0,
#Partially deleted in new
chr16	68477236	68477570	chr16:68477236-68477570	7	-	68477236	68477236	16724991	1	334,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	68530089	68558106	chr16:68530089-68558106	0	+	68539792	68558106	789624	4	245,158,68,67,	0,3608,9668,27950,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	68530089	68558105	chr16:68530089-68558105	0	+	68539792	68558105	789624	4	245,158,68,108,	0,3608,9668,27908,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	68530147	68558101	chr16:68530147-68558101	0	+	68539792	68558101	789624	4	387,158,68,104,	0,3550,9610,27850,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	68530283	68558514	chr16:68530283-68558514	0	+	68530283	68530283	8553170	4	251,158,127,42,	0,3414,27714,28189,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	68539212	68567131	chr16:68539212-68567131	3	+	68539792	68564698	789624	5	257,68,127,96,4088,	0,545,18785,19260,23831,
#Partially deleted in new
chr16	68539283	68565068	chr16:68539283-68565068	1	+	68539792	68564698	789624	5	196,68,127,96,2025,	0,474,18714,19189,23760,
#Partially deleted in new
chr16	68539290	68563098	chr16:68539290-68563098	0	+	68539792	68563098	789624	5	139,68,127,96,55,	0,467,18707,19182,23753,
#Partially deleted in new
chr16	68539290	68563078	chr16:68539290-68563078	1	+	68539792	68563014	789624	5	179,68,127,96,90,	0,467,18707,19182,23698,
#Partially deleted in new
chr16	68539290	68563098	chr16:68539290-68563098	0	+	68539792	68563098	789624	5	197,68,127,96,55,	0,467,18707,19182,23753,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	68539296	68567135	chr16:68539296-68567135	0	+	68539792	68558397	789624	5	183,68,127,194,4092,	0,461,18701,19078,23747,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	68539296	68558172	chr16:68539296-68558172	0	+	68539296	68539296	8553170	4	183,68,119,175,	0,461,17876,18701,
#Partially deleted in new
chr16	68539313	68563188	chr16:68539313-68563188	0	+	68539792	68558397	789624	5	116,68,127,194,145,	0,444,18684,19061,23730,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	68539315	68576040	chr16:68539315-68576040	1	+	68539792	68575876	789624	5	154,68,127,96,250,	0,442,18682,19157,36475,
#Partially deleted in new
chr16	68539322	68563137	chr16:68539322-68563137	0	+	68539792	68558397	789624	5	165,68,127,194,94,	0,435,18675,19052,23721,
#Partially deleted in new
chr16	68539702	68563155	chr16:68539702-68563155	0	+	68539792	68558397	789624	4	123,127,194,112,	0,18295,18672,23341,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	68539757	68567136	chr16:68539757-68567136	1	+	68539792	68564698	789624	4	68,127,96,4093,	0,18240,18715,23286,
#Partially deleted in new
chr16	68539794	68555240	chr16:68539794-68555240	0	+	68539794	68555200	789624	2	31,168,	0,15278,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	68557997	68576072	chr16:68557997-68576072	0	+	68557997	68575876	789624	3	127,96,282,	0,475,17793,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	68562060	68565961	chr16:68562060-68565961	0	+	68562060	68562060	8553170	1	3901,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	68573781	68589512	chr16:68573781-68589512	3	-	68573781	68573781	8553170	2	442,105,	0,15626,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	68591381	68594424	chr16:68591381-68594424	3	+	68591381	68591381	8553170	1	3043,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	68630222	68630354	chr16:68630222-68630354	3	-	68630222	68630222	8553170	1	132,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	68630850	68630968	chr16:68630850-68630968	3	-	68630850	68630850	8553170	1	118,	0,
#Partially deleted in new
chr16	68636188	68645318	chr16:68636188-68645318	0	+	68636188	68636188	8553170	2	222,310,	0,8820,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	68644247	68646168	chr16:68644247-68646168	3	-	68644247	68644247	8553170	2	1493,189,	0,1732,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	68644835	68700295	chr16:68644835-68700295	3	+	68645379	68698400	0	16	589,115,86,144,156,145,176,129,186,242,146,225,207,131,147,2105,	0,800,31549,33298,33665,33926,34963,36132,37466,39747,40369,42676,46884,50419,50941,53355,
#Partially deleted in new
chr16	68644992	68699036	chr16:68644992-68699036	1	+	68645379	68698167	0	16	432,115,86,144,156,145,176,129,186,242,146,225,207,131,147,944,	0,643,31392,33141,33508,33769,34806,35975,37309,39590,40212,42519,46727,50262,50784,53100,
#Partially deleted in new
chr16	68645300	68698692	chr16:68645300-68698692	0	+	68645379	68678149	789624	15	124,86,144,156,145,176,129,186,242,146,225,207,131,147,502,	0,31084,32833,33200,33461,34498,35667,37001,39282,39904,42211,46419,49954,50476,52890,
#Partially deleted in new
chr16	68645636	68679812	chr16:68645636-68679812	0	+	68645636	68678240	789624	5	114,144,156,145,14,	0,32497,32864,33125,34162,
#Partially deleted in new
chr16	68651055	68651948	chr16:68651055-68651948	7	-	68651055	68651055	16724991	1	893,	0,
#Partially deleted in new
chr16	68678266	68682392	chr16:68678266-68682392	0	+	68678266	68679810	789624	5	11,156,176,129,91,	0,234,1532,2701,4035,
#Partially deleted in new
chr16	68686398	68686670	chr16:68686398-68686670	7	+	68686398	68686398	16724991	1	272,	0,
#Partially deleted in new
chr16	68687619	68698472	chr16:68687619-68698472	0	+	68687619	68687744	789624	5	125,207,131,147,282,	0,4100,7635,8157,10571,
#Partially deleted in new
chr16	68691845	68696134	chr16:68691845-68696134	0	+	68691845	68696031	789624	3	81,131,358,	0,3409,3931,
#Partially deleted in new
chr16	68695824	68722616	chr16:68695824-68722616	0	+	68695824	68722571	789624	2	99,192,	0,26600,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	68737224	68835548	chr16:68737224-68835548	3	+	68737415	68833499	0	16	239,115,224,144,156,145,176,129,183,245,146,225,228,131,144,2259,	0,1072,64445,71199,71468,72972,74459,74910,76088,78290,82055,84776,86174,90949,92429,96065,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr16	68737291	68835541	chr16:68737291-68835541	1	+	68737415	68833499	789624	17	172,115,224,144,156,145,176,129,183,63,245,146,225,228,131,144,2252,	0,1005,64378,71132,71401,72905,74392,74843,76021,76208,78223,81988,84709,86107,90882,92362,95998,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	68737291	68834281	chr16:68737291-68834281	1	+	68737415	68834281	789624	14	172,115,224,144,156,145,176,129,183,245,146,119,23,91,	0,1005,64378,71132,71401,72905,74392,74843,76021,78223,81988,84709,89240,96899,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	68737308	68835534	chr16:68737308-68835534	1	+	68737415	68834281	789624	13	155,115,224,144,156,145,176,129,183,245,146,154,1332,	0,988,64361,71115,71384,72888,74375,74826,76004,78206,81971,84692,96894,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	68737311	68835030	chr16:68737311-68835030	0	+	68737415	68822049	789624	15	152,115,224,144,156,145,176,129,183,245,225,228,131,144,1741,	0,985,64358,71112,71381,72885,74372,74823,76001,78203,84689,86087,90862,92342,95978,
#Partially deleted in new
chr16	68737351	68833536	chr16:68737351-68833536	1	+	68737415	68833499	0	15	112,115,224,144,156,145,176,129,245,146,225,228,131,144,247,	0,945,64318,71072,71341,72845,74332,74783,78163,81928,84649,86047,90822,92302,95938,
#Partially deleted in new
chr16	68737351	68833536	chr16:68737351-68833536	0	+	68737415	68815528	789624	15	112,115,224,144,145,176,129,250,245,146,225,228,131,144,247,	0,945,64318,71072,72845,74332,74783,75961,78163,81928,84649,86047,90822,92302,95938,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	68742479	68742588	chr16:68742479-68742588	7	+	68742479	68742479	16724991	1	109,	0,
#Partially deleted in new
chr16	68763293	68833538	chr16:68763293-68833538	0	+	68763293	68763293	8553170	15	234,224,144,156,145,176,129,183,245,146,225,228,131,144,249,	0,38376,45130,45399,46903,48390,48841,50019,52221,55986,58707,60105,64880,66360,69996,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	68765119	68808848	chr16:68765119-68808848	0	+	68765119	68765119	8553170	4	445,224,144,156,	0,36550,43304,43573,
#Partially deleted in new
chr16	68770947	68808747	chr16:68770947-68808747	0	+	68770947	68770947	8553170	4	158,224,144,55,	0,30722,37476,37745,
#Partially deleted in new
chr16	68801739	68812240	chr16:68801739-68812240	0	+	68801739	68811695	789624	5	154,144,156,176,106,	0,6684,6953,9944,10395,
#Partially deleted in new
chr16	68808526	68809003	chr16:68808526-68809003	0	+	68808526	68808526	8553170	2	41,311,	0,166,
#Partially deleted in new
chr16	68812082	68813413	chr16:68812082-68813413	0	+	68812082	68812082	8553170	2	181,101,	0,1230,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	68814329	68823526	chr16:68814329-68823526	3	-	68814329	68814329	8553170	3	215,84,263,	0,1246,8934,
#Partially deleted in new
chr16	68822586	68823070	chr16:68822586-68823070	7	+	68822586	68822586	16724991	1	484,	0,
#Partially deleted in new
chr16	68823244	68833584	chr16:68823244-68833584	0	+	68823244	68823244	8553170	4	382,131,144,295,	0,4929,6409,10045,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	68843603	68867976	chr16:68843603-68867976	0	+	68843603	68843603	8553170	4	108,641,117,898,	0,16280,19341,23475,
#Partially deleted in new
chr16	68843605	69085180	chr16:68843605-69085180	3	+	68843617	69083661	789624	18	106,641,117,142,137,163,83,113,177,133,192,135,516,58,141,152,114,1696,	0,16278,19339,23473,31548,34512,36942,56828,58722,63837,65605,75479,83962,86632,130422,179222,196702,239879,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	68843613	68846893	chr16:68843613-68846893	0	+	68843613	68843613	8553170	2	98,377,	0,2903,
#Partially deleted in new
chr16	68860164	68863160	chr16:68860164-68863160	0	+	68860164	68860164	8553170	2	360,216,	0,2780,
#Partially deleted in new
chr16	68875223	68902442	chr16:68875223-68902442	0	+	68875223	68878151	789624	5	67,174,83,113,115,	0,2883,5324,25210,27104,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	68885575	68885677	chr16:68885575-68885677	3	-	68885575	68885575	8553170	1	102,	0,
#Partially deleted in new
chr16	68900237	68907533	chr16:68900237-68907533	0	+	68900237	68900237	8553170	3	309,177,91,	0,2090,7205,
#Partially deleted in new
chr16	68909379	68927769	chr16:68909379-68927769	0	+	68909379	68909462	789624	3	236,135,202,	0,9705,18188,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	68926893	68926957	chr16:68926893-68926957	3	-	68926893	68926893	8553170	1	64,	0,
#Partially deleted in new
chr16	68927546	68948261	chr16:68927546-68948261	3	-	68927546	68927546	8553170	2	207,53,	0,20662,
#Partially deleted in new
chr16	68933819	68937725	chr16:68933819-68937725	3	+	68933819	68933819	8553170	2	82,559,	0,3347,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	68973039	69083515	chr16:68973039-69083515	0	+	68973039	68973039	8553170	5	104,141,152,114,31,	0,988,49788,67268,110445,
#Partially deleted in new
chr16	68973871	69083543	chr16:68973871-69083543	0	+	68973871	68973871	8553170	4	297,152,114,59,	0,48956,66436,109613,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	69007051	69007155	chr16:69007051-69007155	3	-	69007051	69007051	8553170	1	104,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	69025859	69026643	chr16:69025859-69026643	7	-	69025859	69025859	16724991	2	145,334,	0,450,
#Partially deleted in new
chr16	69026574	69083846	chr16:69026574-69083846	0	+	69026574	69026574	8553170	3	109,114,362,	0,13733,56910,
#Deleted in new
chr16	69033674	69034521	chr16:69033674-69034521	5	+	69033674	69033674	16724991	1	847,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	69033985	69036042	chr16:69033985-69036042	7	+	69033985	69033985	16724991	1	2057,	0,
#Partially deleted in new
chr16	69105563	69115550	chr16:69105563-69115550	1	+	69109395	69115266	789624	4	224,636,102,1208,	0,3832,7877,8779,
#Deleted in new
chr16	69106253	69106988	chr16:69106253-69106988	0	+	69106253	69106253	8553170	2	63,417,	0,318,
#Partially deleted in new
chr16	69106256	69118719	chr16:69106256-69118719	1	+	69109395	69118462	789624	4	60,636,102,365,	0,3139,7184,12098,
#Partially deleted in new
chr16	69106608	69114397	chr16:69106608-69114397	0	+	69109395	69114397	789624	4	107,636,102,55,	0,2787,6832,7734,
#Partially deleted in new
chr16	69107539	69117668	chr16:69107539-69117668	3	+	69109395	69115266	789624	4	156,636,102,3326,	0,1856,5901,6803,
#Deleted in new
chr16	69118009	69120570	chr16:69118009-69120570	1	-	69118853	69120428	789624	1	2561,	0,
#Partially deleted in new
chr16	69118009	69132570	chr16:69118009-69132570	3	-	69120424	69121458	789624	4	2640,118,58,87,	0,3043,3426,14474,
#Partially deleted in new
chr16	69118121	69132567	chr16:69118121-69132567	1	-	69120121	69121458	789624	5	404,102,118,58,84,	0,1985,2931,3314,14362,
#Deleted in new
chr16	69118133	69121492	chr16:69118133-69121492	1	-	69118489	69121458	789624	3	392,118,57,	0,2919,3302,
#Deleted in new
chr16	69118318	69120622	chr16:69118318-69120622	0	-	69120424	69120622	789624	2	207,516,	0,1788,
#Partially deleted in new
chr16	69119810	69132146	chr16:69119810-69132146	1	-	69120424	69121458	789624	4	839,118,58,58,	0,1242,1625,12278,
#Partially deleted in new
chr16	69119952	69132584	chr16:69119952-69132584	1	-	69120633	69121458	789624	3	697,58,101,	0,1483,12531,
#Partially deleted in new
chr16	69120004	69132572	chr16:69120004-69132572	0	-	69120424	69132572	789624	2	645,89,	0,12479,
#Partially deleted in new
chr16	69120026	69132573	chr16:69120026-69132573	0	-	69120424	69132573	789624	3	623,118,90,	0,1026,12457,
#Partially deleted in new
chr16	69120295	69132151	chr16:69120295-69132151	1	-	69120633	69121458	789624	3	354,58,63,	0,1140,11793,
#Partially deleted in new
chr16	69120460	69132578	chr16:69120460-69132578	1	-	69120893	69121458	789624	3	710,58,95,	0,975,12023,
#Partially deleted in new
chr16	69131290	69139903	chr16:69131290-69139903	0	+	69131323	69139903	789624	5	118,107,192,85,79,	0,2221,5405,6510,8534,
#Partially deleted in new
chr16	69132514	69169021	chr16:69132514-69169021	3	+	69133459	69168937	789624	17	175,161,192,85,90,212,172,92,97,65,123,157,107,96,186,111,201,	0,943,4181,5286,7310,10663,18022,18298,21069,21878,23356,24569,27841,30568,32826,34560,36306,
#Partially deleted in new
chr16	69132595	69169020	chr16:69132595-69169020	0	+	69132595	69168937	789624	17	94,107,192,85,90,212,172,92,97,65,123,157,107,96,186,111,200,	0,916,4100,5205,7229,10582,17941,18217,20988,21797,23275,24488,27760,30487,32745,34479,36225,
#Partially deleted in new
chr16	69132612	69143328	chr16:69132612-69143328	0	+	69136785	69143328	789624	5	77,192,85,90,151,	0,4083,5188,7212,10565,
#Partially deleted in new
chr16	69132645	69143389	chr16:69132645-69143389	0	+	69136680	69143389	789624	6	44,107,209,85,90,212,	0,866,4033,5155,7179,10532,
#Partially deleted in new
chr16	69132649	69169020	chr16:69132649-69169020	1	+	69133459	69168937	789624	14	40,161,192,85,90,212,172,92,97,107,96,186,111,200,	0,808,4046,5151,7175,10528,17887,18163,20934,27706,30433,32691,34425,36171,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	69132657	69167842	chr16:69132657-69167842	1	+	69133459	69165571	789624	15	32,161,192,85,90,212,172,92,97,65,123,157,107,96,2502,	0,800,4038,5143,7167,10520,17879,18155,20926,21735,23213,24426,27698,30425,32683,
#Partially deleted in new
chr16	69132662	69138026	chr16:69132662-69138026	0	+	69132662	69132662	8553170	4	27,107,192,226,	0,849,4033,5138,
#Partially deleted in new
chr16	69132872	69139832	chr16:69132872-69139832	0	+	69133459	69139832	789624	5	140,161,192,85,8,	0,585,3823,4928,6952,
#Partially deleted in new
chr16	69132883	69139873	chr16:69132883-69139873	0	+	69136785	69139873	789624	5	129,107,192,85,49,	0,628,3812,4917,6941,
#Partially deleted in new
chr16	69133510	69143300	chr16:69133510-69143300	0	+	69133510	69133510	8553170	5	108,192,177,90,123,	0,3185,4290,6314,9667,
#Partially deleted in new
chr16	69139671	69150634	chr16:69139671-69150634	0	+	69139671	69139671	8553170	3	243,212,98,	0,3506,10865,
#Partially deleted in new
chr16	69142115	69150818	chr16:69142115-69150818	0	+	69142115	69142115	8553170	4	184,212,172,6,	0,1062,8421,8697,
#Partially deleted in new
chr16	69154421	69169038	chr16:69154421-69169038	0	+	69154421	69168937	789624	6	36,123,157,107,96,218,	0,1449,2662,5934,8661,14399,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	69167103	69231130	chr16:69167103-69231130	0	+	69167103	69167103	8553170	3	82,80,204,	0,63279,63823,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	69187128	69309052	chr16:69187128-69309052	3	+	69187166	69300924	0	7	618,214,211,143,197,185,8221,	0,58473,72921,83014,96919,112461,113703,
#Partially deleted in new
chr16	69187146	69300981	chr16:69187146-69300981	0	+	69187166	69270152	0	6	600,214,143,197,185,150,	0,58455,82996,96901,112443,113685,
#Partially deleted in new
chr16	69187560	69260100	chr16:69187560-69260100	0	+	69187560	69235755	789624	4	186,86,214,51,	0,48187,58041,72489,
#Partially deleted in new
chr16	69187560	69270200	chr16:69187560-69270200	0	+	69187560	69270152	789624	4	186,214,78,58,	0,58041,72489,82582,
#Partially deleted in new
chr16	69187584	69260101	chr16:69187584-69260101	0	+	69187584	69260101	789624	3	149,214,52,	0,58017,72465,
#Partially deleted in new
chr16	69187641	69270181	chr16:69187641-69270181	0	+	69187641	69187641	8553170	4	105,214,90,39,	0,57960,72529,82501,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	69191122	69191223	chr16:69191122-69191223	3	+	69191122	69191122	8553170	1	101,	0,
#Partially deleted in new
chr16	69299681	69322700	chr16:69299681-69322700	3	+	69299681	69322700	789624	10	93,112,148,62,120,157,149,82,220,141,	0,16326,16543,18968,19141,19705,20459,21006,21369,22878,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	69311355	69326939	chr16:69311355-69326939	3	+	69311511	69324309	0	11	177,112,148,62,120,157,149,82,220,141,2732,	0,4652,4869,7294,7467,8031,8785,9332,9695,11204,12852,
#Deleted in new
chr16	69319488	69321116	chr16:69319488-69321116	0	+	69319488	69319488	8553170	3	55,149,429,	0,652,1199,
#Partially deleted in new
chr16	69320139	69328666	chr16:69320139-69328666	0	-	69320139	69320139	8553170	2	907,29,	0,8498,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	69321210	69325046	chr16:69321210-69325046	0	+	69321210	69321210	8553170	2	1490,839,	0,2997,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	69321990	69339493	chr16:69321990-69339493	0	-	69323582	69339493	789624	4	1713,23,208,318,	0,13335,14514,17185,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	69326912	69339667	chr16:69326912-69339667	1	-	69330838	69339633	789624	6	2267,283,169,828,208,492,	0,3900,5801,7608,9592,12263,
#Deleted in new
chr16	69328620	69330595	chr16:69328620-69330595	3	-	69329021	69330570	0	2	559,599,	0,1376,
#Partially deleted in new
chr16	69328620	69339623	chr16:69328620-69339623	3	-	69330838	69339552	789624	6	559,283,169,828,208,448,	0,2192,4093,5900,7884,10555,
#Partially deleted in new
chr16	69328643	69334871	chr16:69328643-69334871	3	-	69329035	69334871	789624	2	536,351,	0,5877,
#Partially deleted in new
chr16	69332595	69339583	chr16:69332595-69339583	1	-	69332690	69339552	789624	4	287,828,208,408,	0,1925,3909,6580,
#Partially deleted in new
chr16	69335090	69356306	chr16:69335090-69356306	3	-	69335090	69356210	789624	3	258,208,98,	0,1414,21118,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	69335214	69338577	chr16:69335214-69338577	0	-	69335214	69336669	789624	3	134,208,370,	0,1290,2993,
#Partially deleted in new
chr16	69335275	69351729	chr16:69335275-69351729	0	-	69336701	69351729	789624	4	73,208,127,189,	0,1229,14249,16265,
#Partially deleted in new
chr16	69335300	69351730	chr16:69335300-69351730	3	-	69336661	69351730	789624	5	48,208,149,127,190,	0,1204,12487,14224,16240,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	69337995	69343091	chr16:69337995-69343091	0	+	69337995	69337995	8553170	4	2097,139,141,1559,	0,2198,3184,3537,
#Deleted in new
chr16	69339080	69339506	chr16:69339080-69339506	0	-	69339141	69339506	789624	1	426,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	69339429	69343111	chr16:69339429-69343111	3	+	69339829	69341652	0	5	456,87,139,141,1579,	0,576,764,1750,2103,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	69339567	69340887	chr16:69339567-69340887	1	+	69339829	69340383	789624	3	318,87,694,	0,438,626,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	69339796	69343104	chr16:69339796-69343104	1	+	69339829	69341652	0	4	89,87,139,1572,	0,209,397,1736,
#Partially deleted in new
chr16	69339829	69341435	chr16:69339829-69341435	0	+	69339829	69339829	8553170	3	56,327,256,	0,176,1350,
#Deleted in new
chr16	69339992	69340665	chr16:69339992-69340665	0	+	69339992	69339992	8553170	2	100,472,	0,201,
#Partially deleted in new
chr16	69340270	69342054	chr16:69340270-69342054	0	+	69340270	69341647	789624	3	62,141,443,	0,909,1341,
#Partially deleted in new
chr16	69340275	69342072	chr16:69340275-69342072	0	+	69340275	69341525	789624	3	57,141,562,	0,904,1235,
#Partially deleted in new
chr16	69343247	69351809	chr16:69343247-69351809	3	-	69343406	69351753	789624	4	393,149,127,269,	0,4540,6277,8293,
#Partially deleted in new
chr16	69343488	69348409	chr16:69343488-69348409	0	-	69343488	69343488	8553170	2	152,622,	0,4299,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	69355560	69385988	chr16:69355560-69385988	3	-	69356897	69385971	0	10	1496,44,86,393,107,147,87,131,96,396,	0,1957,5843,11246,12815,14922,16708,29019,29830,30032,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	69356333	69361471	chr16:69356333-69361471	0	-	69356976	69361471	789624	2	723,68,	0,5070,
#Partially deleted in new
chr16	69361351	69366984	chr16:69361351-69366984	0	-	69361351	69361351	8553170	2	138,178,	0,5455,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	69364966	69372282	chr16:69364966-69372282	0	-	69366733	69372282	789624	4	2233,107,147,14,	0,3409,5516,7302,
#Partially deleted in new
chr16	69366934	69385570	chr16:69366934-69385570	0	-	69366934	69385502	789624	6	265,107,147,87,131,180,	0,1441,3548,5334,17645,18456,
#Partially deleted in new
chr16	69366946	69384650	chr16:69366946-69384650	0	-	69366946	69384650	789624	3	253,107,71,	0,1429,17633,
#Partially deleted in new
chr16	69367048	69384747	chr16:69367048-69384747	0	-	69367048	69384696	789624	6	151,107,9,147,87,168,	0,1327,1538,3434,5220,17531,
#Partially deleted in new
chr16	69367080	69372355	chr16:69367080-69372355	0	-	69368529	69372355	789624	4	119,220,147,87,	0,1295,3402,5188,
#Partially deleted in new
chr16	69368507	69385599	chr16:69368507-69385599	0	-	69368507	69368507	8553170	6	88,147,87,131,96,7,	0,1975,3761,16072,16883,17085,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	69370210	69385988	chr16:69370210-69385988	1	-	69370440	69385971	0	5	419,87,131,96,396,	0,2058,14369,15180,15382,
#Partially deleted in new
chr16	69370533	69385733	chr16:69370533-69385733	0	-	69385407	69385733	789624	5	96,87,131,96,103,	0,1735,14046,14857,15097,
#Partially deleted in new
chr16	69372268	69408571	chr16:69372268-69408571	0	-	69372268	69385430	789624	5	87,131,96,105,135,	0,12311,13122,28503,36168,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	69424524	69466266	chr16:69424524-69466266	1	+	69424695	69462520	0	5	333,129,30,29,3837,	0,22625,23590,34568,37905,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	69424594	69466264	chr16:69424594-69466264	3	+	69424683	69462520	789624	5	263,129,30,29,3835,	0,22555,23520,34498,37835,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	69424618	69450238	chr16:69424618-69450238	0	+	69424618	69424618	8553170	3	239,129,2124,	0,22531,23496,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	69424677	69463778	chr16:69424677-69463778	1	+	69424695	69462534	789624	3	180,129,1349,	0,22472,37752,
#Partially deleted in new
chr16	69424679	69462918	chr16:69424679-69462918	1	+	69424695	69462534	789624	5	178,129,30,29,457,	0,22470,23435,34413,37782,
#Partially deleted in new
chr16	69424782	69462902	chr16:69424782-69462902	0	+	69424782	69462520	789624	3	75,29,473,	0,34310,37647,
#Partially deleted in new
chr16	69424848	69459572	chr16:69424848-69459572	0	+	69424848	69424848	8553170	4	9,129,30,480,	0,22301,23266,34244,
#Partially deleted in new
chr16	69443239	69444290	chr16:69443239-69444290	7	-	69443239	69443239	16724991	2	316,406,	0,645,
#Deleted in new
chr16	69463843	69466264	chr16:69463843-69466264	3	+	69463843	69463843	8553170	1	2421,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	69565093	69704650	chr16:69565093-69704650	0	+	69566301	69646563	0	16	1281,54,126,62,559,193,191,173,135,53,133,84,149,2491,244,8291,	0,3401,61309,81423,81934,88142,90515,94633,104883,105142,112109,119793,125846,126655,130042,131266,
#Deleted in new
chr16	69565807	69565868	chr16:69565807-69565868	3	-	69565807	69565807	5263520	1	61,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	69565965	69704665	chr16:69565965-69704665	1	+	69647056	69695371	0	16	409,54,126,62,559,193,191,173,135,53,133,84,149,2491,244,8306,	0,2529,60437,80551,81062,87270,89643,93761,104011,104270,111237,118921,124974,125783,129170,130394,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	69565983	69704666	chr16:69565983-69704666	3	+	69566301	69695371	0	14	391,126,559,193,191,173,135,53,133,84,149,2491,244,8307,	0,60419,81044,87252,89625,93743,103993,104252,111219,118903,124956,125765,129152,130376,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	69566025	69686075	chr16:69566025-69686075	0	+	69566301	69646563	789624	13	349,54,126,60,62,140,193,191,173,135,53,133,1186,	0,2469,60377,78771,80491,81002,87210,89583,93701,103951,104210,111177,118864,
#Partially deleted in new
chr16	69566061	69697840	chr16:69566061-69697840	1	+	69566301	69695371	0	15	313,54,126,559,193,191,173,135,53,133,81,149,2491,244,1481,	0,2433,60341,80966,87174,89547,93665,103915,104174,111141,118828,124878,125687,129074,130298,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	69566207	69704666	chr16:69566207-69704666	1	+	69647056	69695371	0	15	167,126,62,559,193,191,173,135,53,133,84,149,2491,244,8307,	0,60195,80309,80820,87028,89401,93519,103769,104028,110995,118679,124732,125541,128928,130152,
#Partially deleted in new
chr16	69566207	69697482	chr16:69566207-69697482	1	+	69566301	69695371	0	15	167,54,126,559,193,191,173,135,53,133,84,149,2491,244,1123,	0,2287,60195,80820,87028,89401,93519,103769,104028,110995,118679,124732,125541,128928,130152,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	69566350	69695676	chr16:69566350-69695676	1	+	69647056	69695371	0	14	24,126,62,559,193,191,173,135,53,133,84,149,2491,541,	0,60052,80166,80677,86885,89258,93376,103626,103885,110852,118536,124589,125398,128785,
#Deleted in new
chr16	69632140	69632571	chr16:69632140-69632571	3	+	69632140	69632140	8553170	1	431,	0,
#Partially deleted in new
chr16	69647131	69696578	chr16:69647131-69696578	0	+	69647131	69695371	789624	4	36,154,244,219,	0,46954,48004,49228,
#Partially deleted in new
chr16	69653235	69684916	chr16:69653235-69684916	0	+	69653235	69670022	789624	6	193,191,135,53,133,27,	0,2373,16741,17000,23967,31654,
#Partially deleted in new
chr16	69676894	69690976	chr16:69676894-69690976	0	+	69676894	69676894	8553170	3	441,84,37,	0,7992,14045,
#Deleted in new
chr16	69690543	69692053	chr16:69690543-69692053	0	+	69690543	69690543	8553170	2	545,305,	0,1205,
#Deleted in new
chr16	69703064	69704652	chr16:69703064-69704652	3	+	69703064	69703064	8553170	1	1588,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	69706995	69726506	chr16:69706995-69726506	1	-	69707009	69726439	789624	6	212,207,102,131,165,74,	0,4079,6032,11127,11374,19437,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	69709400	69726951	chr16:69709400-69726951	3	-	69710975	69726439	0	6	1881,102,114,131,165,519,	0,3627,5563,8722,8969,17032,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	69709400	69726668	chr16:69709400-69726668	1	-	69710975	69726439	0	5	1881,114,131,165,236,	0,5563,8722,8969,17032,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	69709873	69710583	chr16:69709873-69710583	3	+	69709873	69709873	8553170	2	228,347,	0,363,
#Partially deleted in new
chr16	69710726	69726584	chr16:69710726-69726584	1	-	69710975	69726439	0	5	555,102,131,165,152,	0,2301,7396,7643,15706,
#Partially deleted in new
chr16	69710781	69726560	chr16:69710781-69726560	1	-	69710975	69726439	789624	4	500,131,165,128,	0,7341,7588,15651,
#Partially deleted in new
chr16	69710961	69726560	chr16:69710961-69726560	1	-	69710975	69718478	789624	6	320,102,114,131,165,60,	0,2066,4002,7161,7408,15539,
#Partially deleted in new
chr16	69717992	69726525	chr16:69717992-69726525	0	-	69717992	69717992	8553170	3	261,165,93,	0,377,8440,
#Partially deleted in new
chr16	69727012	69742563	chr16:69727012-69742563	3	+	69727012	69727012	8553170	2	163,429,	0,15122,
#Partially deleted in new
chr16	69741866	69754940	chr16:69741866-69754940	3	-	69742331	69754910	0	9	735,145,98,201,126,72,131,133,93,	0,3006,6365,7051,7346,7692,10374,12727,12981,
#Partially deleted in new
chr16	69742575	69754924	chr16:69742575-69754924	0	-	69749625	69754910	789624	8	26,145,98,168,126,72,133,77,	0,2297,5656,6375,6637,6983,12018,12272,
#Partially deleted in new
chr16	69744902	69754914	chr16:69744902-69754914	0	-	69749625	69754910	789624	7	115,98,201,126,72,133,67,	0,3329,4015,4310,4656,9691,9945,
#Partially deleted in new
chr16	69748747	69752253	chr16:69748747-69752253	0	-	69748747	69748747	8553170	4	371,126,72,13,	0,465,811,3493,
#Partially deleted in new
chr16	69749052	69754792	chr16:69749052-69754792	0	-	69749052	69749052	8553170	2	286,199,	0,5541,
#Partially deleted in new
chr16	69749309	69754917	chr16:69749309-69754917	0	-	69749309	69749309	8553170	4	29,72,131,324,	0,249,2931,5284,
#Deleted in new
chr16	69756535	69757937	chr16:69756535-69757937	7	-	69756535	69756535	16724991	1	1402,	0,
#Partially deleted in new
chr16	69762305	69941741	chr16:69762305-69941741	3	+	69787010	69939940	0	24	86,85,148,122,138,97,128,211,90,175,55,82,129,76,72,89,160,134,141,121,105,97,73,1901,	0,24690,36376,36868,77820,79718,109498,125733,146455,155403,163124,167142,167824,168846,169203,169496,171664,173547,174006,174812,175242,176721,177035,177535,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	69762327	69799276	chr16:69762327-69799276	0	+	69787010	69799276	789624	6	64,53,121,85,148,103,	0,13861,20704,24668,36354,36846,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	69762327	69840144	chr16:69762327-69840144	0	+	69787010	69827904	789624	8	64,53,121,85,148,122,126,19,	0,13861,20704,24668,36354,36846,65566,77798,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	69762331	69788202	chr16:69762331-69788202	0	+	69762331	69762331	8553170	3	60,85,265,	0,24664,25606,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	69762361	69798796	chr16:69762361-69798796	0	+	69787010	69798796	789624	7	30,95,62,53,121,85,115,	0,12332,12717,13827,20670,24634,36320,
#Partially deleted in new
chr16	69762361	69799493	chr16:69762361-69799493	0	+	69762361	69762361	8553170	4	30,85,148,320,	0,24634,36320,36812,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	69776186	69910250	chr16:69776186-69910250	1	+	69787010	69908854	0	9	55,85,148,122,138,97,128,211,1490,	0,10809,22495,22987,63939,65837,95617,111852,132574,
#Deleted in new
chr16	69785993	69786113	chr16:69785993-69786113	3	-	69785993	69785993	8553170	1	120,	0,
#Partially deleted in new
chr16	69798864	69940178	chr16:69798864-69940178	0	+	69798864	69798864	8553170	22	90,122,138,97,128,211,90,175,55,82,129,76,72,89,160,134,141,121,105,97,73,338,	0,309,41261,43159,72939,89174,109896,118844,126565,130583,131265,132287,132644,132937,135105,136988,137447,138253,138683,140162,140476,140976,
#Partially deleted in new
chr16	69799045	69871865	chr16:69799045-69871865	0	+	69799045	69799045	8553170	4	250,138,97,62,	0,41080,42978,72758,
#Partially deleted in new
chr16	69838736	69941741	chr16:69838736-69941741	1	+	69840133	69939940	0	21	153,138,97,128,211,90,175,55,82,129,76,72,89,160,134,141,121,105,97,73,1901,	0,1389,3287,33067,49302,70024,78972,86693,90711,91393,92415,92772,93065,95233,97116,97575,98381,98811,100290,100604,101104,
#Partially deleted in new
chr16	69838736	69888158	chr16:69838736-69888158	0	+	69838736	69838736	8553170	5	153,138,97,128,120,	0,1389,3287,33067,49302,
#Partially deleted in new
chr16	69871712	69908882	chr16:69871712-69908882	0	+	69871712	69871712	8553170	3	219,211,122,	0,16326,37048,
#Partially deleted in new
chr16	69890797	69940621	chr16:69890797-69940621	0	+	69890797	69890797	8553170	17	82,90,175,55,82,129,76,72,89,160,134,141,121,105,97,73,781,	0,17963,26911,34632,38650,39332,40354,40711,41004,43172,45055,45514,46320,46750,48229,48543,49043,
#Partially deleted in new
chr16	69894961	69929466	chr16:69894961-69929466	0	+	69894961	69894961	8553170	5	188,90,175,55,19,	0,13799,22747,30468,34486,
#Partially deleted in new
chr16	69917582	69940176	chr16:69917582-69940176	0	+	69917582	69917582	8553170	15	301,55,82,129,76,72,89,160,134,141,121,105,97,73,336,	0,7847,11865,12547,13569,13926,14219,16387,18270,18729,19535,19965,21444,21758,22258,
#Partially deleted in new
chr16	69924989	69941738	chr16:69924989-69941738	1	+	69930130	69939940	0	14	495,82,129,76,72,89,160,134,141,121,105,97,73,1898,	0,4458,5140,6162,6519,6812,8980,10863,11322,12128,12558,14037,14351,14851,
#Deleted in new
chr16	69925011	69926096	chr16:69925011-69926096	0	+	69925011	69925011	8553170	2	473,117,	0,968,
#Partially deleted in new
chr16	69930165	69933981	chr16:69930165-69933981	0	+	69930165	69930165	8553170	4	93,76,382,12,	0,986,1343,3804,
#Deleted in new
chr16	69933080	69933180	chr16:69933080-69933180	3	+	69933080	69933080	5263520	1	100,	0,
#Deleted in new
chr16	69934050	69936796	chr16:69934050-69936796	0	+	69934050	69934050	8553170	3	79,134,485,	0,1802,2261,
#Partially deleted in new
chr16	69936919	69939397	chr16:69936919-69939397	0	+	69936919	69936919	8553170	4	319,105,97,57,	0,628,2107,2421,
#Partially deleted in new
chr16	69950704	69964347	chr16:69950704-69964347	3	+	69951366	69963611	789624	13	32,230,92,240,98,122,108,93,107,130,97,92,774,	0,556,1330,3629,8237,8755,9034,9668,10140,10881,11283,12271,12869,
#Partially deleted in new
chr16	69950906	69963986	chr16:69950906-69963986	1	+	69951366	69963611	789624	13	133,230,92,240,98,122,108,93,107,130,97,92,413,	0,354,1128,3427,8035,8553,8832,9466,9938,10679,11081,12069,12667,
#Partially deleted in new
chr16	69950985	69963986	chr16:69950985-69963986	1	+	69951366	69963611	789624	13	112,230,92,240,98,122,108,93,107,130,97,92,413,	0,275,1049,3348,7956,8474,8753,9387,9859,10600,11002,11990,12588,
#Partially deleted in new
chr16	69951173	69964452	chr16:69951173-69964452	0	+	69951173	69951173	8553170	9	317,92,240,98,122,108,1712,92,879,	0,861,3160,7768,8286,8565,9199,11802,12400,
#Partially deleted in new
chr16	69951179	69964238	chr16:69951179-69964238	1	+	69951366	69963611	789624	12	311,92,240,98,122,108,93,107,130,97,92,665,	0,855,3154,7762,8280,8559,9193,9665,10406,10808,11796,12394,
#Partially deleted in new
chr16	69951232	69963984	chr16:69951232-69963984	1	+	69951366	69963611	789624	13	258,92,240,98,122,108,93,107,130,97,27,92,411,	0,802,3101,7709,8227,8506,9140,9612,10353,10755,11507,11743,12341,
#Partially deleted in new
chr16	69951276	69961400	chr16:69951276-69961400	0	+	69951276	69951276	8553170	8	214,92,240,98,122,108,93,556,	0,758,3057,7665,8183,8462,9096,9568,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	69951472	69953812	chr16:69951472-69953812	0	+	69951472	69951472	8553170	1	2340,	0,
#Partially deleted in new
chr16	69951740	69959549	chr16:69951740-69959549	0	+	69952114	69959549	789624	3	386,98,90,	0,7201,7719,
#Partially deleted in new
chr16	69975237	69975344	chr16:69975237-69975344	7	+	69975237	69975237	16724991	1	107,	0,
#Partially deleted in new
chr16	69976296	70065948	chr16:69976296-70065948	3	-	69976296	69976296	5263520	26	436,1193,36,145,100,129,253,87,158,79,106,89,64,51,126,99,49,85,79,69,190,147,81,66,74,193,	0,514,1780,6053,6361,10084,13659,14300,19772,20093,34454,35544,37807,41750,45527,47082,47333,48289,54691,55603,57874,60135,62608,66054,66633,89459,
#Partially deleted in new
chr16	69976351	70065853	chr16:69976351-70065853	0	-	69976351	69976351	8553170	25	381,36,61,145,100,129,87,158,79,106,89,64,51,126,99,49,85,79,69,190,147,196,66,74,98,	0,1725,1870,5998,6306,10029,14245,19717,20038,34399,35489,37752,41695,45472,47027,47278,48234,54636,55548,57819,60080,62553,65999,66578,89404,
#Partially deleted in new
chr16	69976387	69996188	chr16:69976387-69996188	7	-	69976387	69976387	16724991	7	345,36,61,196,100,129,120,	0,1689,1834,5962,6270,9993,19681,
#Partially deleted in new
chr16	69977464	69990084	chr16:69977464-69990084	4	-	69977464	69977464	16724991	6	648,61,145,100,129,129,	0,757,4885,5193,8916,12491,
#Partially deleted in new
chr16	69977605	69982465	chr16:69977605-69982465	4	-	69977605	69977605	16724991	4	398,36,61,116,	0,471,616,4744,
#Partially deleted in new
chr16	69993019	70021930	chr16:69993019-70021930	0	-	69993019	69993019	8553170	8	229,158,79,106,89,64,51,107,	0,3049,3370,17731,18821,21084,25027,28804,
#Partially deleted in new
chr16	69996013	70018422	chr16:69996013-70018422	0	-	69996013	69996013	8553170	3	213,79,376,	0,376,22033,
#Partially deleted in new
chr16	69996163	70065818	chr16:69996163-70065818	0	-	69996163	69996163	8553170	18	63,79,106,89,64,51,126,99,49,85,79,69,190,147,81,66,74,63,	0,226,14587,15677,17940,21883,25660,27215,27466,28422,34824,35736,38007,40268,42741,46187,46766,69592,
#Partially deleted in new
chr16	70010750	70065776	chr16:70010750-70065776	7	-	70010750	70010750	16724991	15	106,89,64,51,126,99,49,85,79,69,190,147,66,74,21,	0,1090,3353,7296,11073,12628,12879,13835,20237,21149,23420,25681,31600,32179,55005,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	70017889	70019410	chr16:70017889-70019410	0	-	70017889	70017889	8553170	1	1521,	0,
#Partially deleted in new
chr16	70017916	70023618	chr16:70017916-70023618	4	-	70017916	70017916	16724991	3	181,126,240,	0,3907,5462,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	70030345	70030422	chr16:70030345-70030422	3	+	70030345	70030345	5263520	1	77,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	70035637	70065820	chr16:70035637-70065820	4	-	70035637	70035637	16724991	6	131,147,81,66,74,65,	0,794,3267,6713,7292,30118,
#Partially deleted in new
chr16	70036431	70065847	chr16:70036431-70065847	4	-	70036431	70036431	16724991	6	147,81,66,74,106,92,	0,2473,5919,6498,28239,29324,
#Partially deleted in new
chr16	70036446	70065945	chr16:70036446-70065945	5	-	70036446	70036446	16724991	5	132,81,66,74,190,	0,2458,5904,6483,29309,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	70063054	70065785	chr16:70063054-70065785	4	-	70063054	70063054	16724991	3	634,106,30,	0,1616,2701,
#Deleted in new
chr16	70079128	70079624	chr16:70079128-70079624	7	-	70079128	70079128	16724991	1	496,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr16	70113625	70162537	chr16:70113625-70162537	3	+	70120492	70156879	789624	19	815,110,259,134,82,164,122,118,150,193,125,156,134,149,113,95,90,183,6063,	0,1195,6835,13634,15158,15333,16797,17676,18525,22568,25273,28608,28927,29884,30795,32508,34838,39765,42849,
#Partially deleted in new
chr16	70114343	70148591	chr16:70114343-70148591	0	+	70114343	70114343	8553170	14	97,259,134,339,122,150,193,125,156,134,149,113,95,128,	0,6117,12916,14440,16079,17807,21850,24555,27890,28209,29166,30077,31790,34120,
#Partially deleted in new
chr16	70114371	70157131	chr16:70114371-70157131	1	+	70127332	70156879	789624	17	69,134,82,164,122,118,150,193,125,156,134,149,113,95,90,183,657,	0,12888,14412,14587,16051,16930,17779,21822,24527,27862,28181,29138,30049,31762,34092,39019,42103,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr16	70114371	70161300	chr16:70114371-70161300	1	+	70120492	70156879	789624	19	69,61,259,134,82,164,122,118,150,193,125,156,134,149,113,95,90,183,4826,	0,498,6089,12888,14412,14587,16051,16930,17779,21822,24527,27862,28181,29138,30049,31762,34092,39019,42103,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	70120130	70158331	chr16:70120130-70158331	0	+	70120492	70142475	789624	16	589,134,82,164,122,118,150,193,125,156,216,149,113,95,90,1857,	0,7129,8653,8828,10292,11171,12020,16063,18768,22103,22340,23379,24290,26003,28333,36344,
#Partially deleted in new
chr16	70131932	70156859	chr16:70131932-70156859	0	+	70131932	70131932	8553170	11	53,150,193,125,156,134,149,113,95,90,385,	0,218,4261,6966,10301,10620,11577,12488,14201,16531,24542,
#Partially deleted in new
chr16	70145726	70156682	chr16:70145726-70156682	0	+	70145732	70156682	789624	5	22,95,90,183,208,	0,407,2737,7664,10748,
#Partially deleted in new
chr16	70145754	70156614	chr16:70145754-70156614	0	+	70146192	70156614	789624	5	43,95,90,183,140,	0,379,2709,7636,10720,
#Partially deleted in new
chr16	70145754	70157234	chr16:70145754-70157234	1	+	70146192	70156879	789624	5	79,95,90,183,760,	0,379,2709,7636,10720,
#Partially deleted in new
chr16	70145794	70158315	chr16:70145794-70158315	0	+	70146192	70147618	789624	6	39,95,133,90,183,1841,	0,339,1746,2669,7596,10680,
#Partially deleted in new
chr16	70145803	70153565	chr16:70145803-70153565	0	+	70146192	70153565	789624	3	425,90,175,	0,2660,7587,
#Partially deleted in new
chr16	70156339	70173419	chr16:70156339-70173419	0	-	70156339	70156339	789624	3	165,85,292,	0,2465,16788,
#Partially deleted in new
chr16	70158956	70173448	chr16:70158956-70173448	3	-	70158956	70158956	8553170	5	1124,140,207,450,321,	0,1215,1778,2487,14171,
#Partially deleted in new
chr16	70173321	70182456	chr16:70173321-70182456	0	+	70174278	70182456	789624	5	327,230,92,98,89,	0,851,1625,8528,9046,
#Partially deleted in new
chr16	70173616	70187256	chr16:70173616-70187256	3	+	70174278	70186520	789624	13	32,230,92,240,98,122,108,93,107,130,97,92,774,	0,556,1330,3624,8233,8751,9030,9664,10136,10877,11279,12268,12866,
#Partially deleted in new
chr16	70173818	70186895	chr16:70173818-70186895	1	+	70174278	70186520	789624	13	133,230,92,240,98,122,108,93,107,130,97,92,413,	0,354,1128,3422,8031,8549,8828,9462,9934,10675,11077,12066,12664,
#Partially deleted in new
chr16	70173897	70186895	chr16:70173897-70186895	1	+	70174278	70186520	789624	13	112,230,92,240,98,122,108,93,107,130,97,92,413,	0,275,1049,3343,7952,8470,8749,9383,9855,10596,10998,11987,12585,
#Partially deleted in new
chr16	70173918	70177382	chr16:70173918-70177382	0	+	70174278	70177382	789624	4	54,230,92,142,	0,254,1028,3322,
#Partially deleted in new
chr16	70174024	70186895	chr16:70174024-70186895	0	+	70174024	70174024	8553170	10	378,92,240,98,122,108,93,1240,92,413,	0,922,3216,7825,8343,8622,9256,9728,11860,12458,
#Partially deleted in new
chr16	70174024	70186895	chr16:70174024-70186895	1	+	70174278	70186520	789624	12	378,92,240,98,122,108,93,107,130,97,92,413,	0,922,3216,7825,8343,8622,9256,9728,10469,10871,11860,12458,
#Partially deleted in new
chr16	70174085	70187361	chr16:70174085-70187361	0	+	70174085	70174085	8553170	9	317,92,240,98,122,108,1712,92,879,	0,861,3155,7764,8282,8561,9195,11799,12397,
#Partially deleted in new
chr16	70174099	70183641	chr16:70174099-70183641	0	+	70174099	70174099	8553170	7	303,92,98,122,108,84,361,	0,847,7750,8268,8547,8966,9181,
#Partially deleted in new
chr16	70174156	70186895	chr16:70174156-70186895	1	+	70174278	70186520	789624	13	246,92,240,98,122,108,93,107,130,97,27,92,413,	0,790,3084,7693,8211,8490,9124,9596,10337,10739,11491,11728,12326,
#Partially deleted in new
chr16	70174384	70182457	chr16:70174384-70182457	0	+	70174384	70174384	8553170	3	654,98,90,	0,7465,7983,
#Partially deleted in new
chr16	70202353	70202459	chr16:70202353-70202459	7	+	70202353	70202353	16724991	1	106,	0,
#Deleted in new
chr16	70219573	70221294	chr16:70219573-70221294	5	-	70219573	70219573	16724991	3	418,160,41,	0,1147,1680,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	70219580	70226033	chr16:70219580-70226033	4	-	70219580	70219580	16724991	6	215,80,160,148,110,1178,	0,331,1140,1673,2790,5275,
#Partially deleted in new
chr16	70219869	70246610	chr16:70219869-70246610	7	-	70219869	70219869	16724991	18	122,160,152,136,213,154,159,165,201,196,146,113,56,119,254,187,98,73,	0,851,1380,2497,6881,7237,9864,11124,11453,12042,12789,13543,13745,14304,21137,23743,25649,26668,
#Partially deleted in new
chr16	70229803	70235369	chr16:70229803-70235369	4	-	70229803	70229803	16724991	10	89,165,87,200,141,102,88,119,162,57,	0,1190,1633,2108,2860,3620,3811,4370,5193,5509,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	70246777	70251930	chr16:70246777-70251930	3	-	70251081	70251900	0	1	5153,	0,
#Partially deleted in new
chr16	70252294	70289543	chr16:70252294-70289543	3	-	70252720	70282763	0	21	612,114,87,120,114,109,185,207,114,179,145,125,151,109,146,145,192,146,189,165,123,	0,973,1419,1624,2326,3433,5738,6685,8749,10051,12663,13243,15364,15976,17323,17901,19486,24191,24671,30325,37126,
#Partially deleted in new
chr16	70253455	70258215	chr16:70253455-70258215	0	-	70253455	70253455	8553170	5	345,120,114,109,183,	0,463,1165,2272,4577,
#Partially deleted in new
chr16	70254389	70262361	chr16:70254389-70262361	0	-	70254389	70262361	789624	7	94,114,109,185,207,114,16,	0,231,1338,3643,4590,6654,7956,
#Partially deleted in new
chr16	70255734	70264985	chr16:70255734-70264985	0	-	70255734	70255734	8553170	5	102,207,114,139,28,	0,3245,5309,6611,9223,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	70259023	70261413	chr16:70259023-70261413	0	-	70259023	70259023	8553170	2	163,370,	0,2020,
#Partially deleted in new
chr16	70259035	70267796	chr16:70259035-70267796	0	-	70259035	70259035	8553170	4	151,114,125,138,	0,2008,6502,8623,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	70262472	70265515	chr16:70262472-70265515	0	-	70262472	70262472	8553170	2	52,558,	0,2485,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	70276068	70276352	chr16:70276068-70276352	3	+	70276068	70276068	8553170	1	284,	0,
#Partially deleted in new
chr16	70289662	70329424	chr16:70289662-70329424	0	+	70289687	70329424	789624	8	43,49,54,136,93,103,115,133,	0,22946,25239,26306,27833,34922,35911,39629,
#Partially deleted in new
chr16	70289766	70333820	chr16:70289766-70333820	1	+	70317526	70333582	0	10	242,136,93,103,115,178,238,163,192,300,	0,26202,27729,34818,35807,39525,40064,41955,43201,43754,
#Partially deleted in new
chr16	70294776	70333823	chr16:70294776-70333823	1	+	70294845	70333582	789624	12	141,49,54,136,93,103,115,178,238,163,192,303,	0,17832,20125,21192,22719,29808,30797,34515,35054,36945,38191,38744,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	70294776	70319683	chr16:70294776-70319683	0	+	70294776	70294776	8553170	6	141,49,54,136,93,83,	0,17832,20125,21192,22719,24824,
#Partially deleted in new
chr16	70294796	70333779	chr16:70294796-70333779	1	+	70294845	70333582	0	11	121,49,54,136,103,115,178,238,163,192,259,	0,17812,20105,21172,29788,30777,34495,35034,36925,38171,38724,
#Partially deleted in new
chr16	70294832	70333695	chr16:70294832-70333695	1	+	70317526	70333582	0	11	234,54,136,93,103,115,178,238,163,192,175,	0,20069,21136,22663,29752,30741,34459,34998,36889,38135,38688,
#Partially deleted in new
chr16	70294832	70317516	chr16:70294832-70317516	0	+	70294832	70294832	8553170	5	234,49,54,136,21,	0,17776,20069,21136,22663,
#Partially deleted in new
chr16	70299052	70335283	chr16:70299052-70335283	3	+	70299297	70333582	0	12	302,49,54,136,93,103,115,178,238,163,192,1763,	0,13556,15849,16916,18443,25532,26521,30239,30778,32669,33915,34468,
#Partially deleted in new
chr16	70299141	70333972	chr16:70299141-70333972	0	+	70299297	70316004	789624	9	213,136,103,115,178,238,163,192,452,	0,16827,25443,26432,30150,30689,32580,33826,34379,
#Partially deleted in new
chr16	70299161	70333826	chr16:70299161-70333826	1	+	70317526	70333582	0	10	193,136,93,103,115,178,238,163,192,306,	0,16807,18334,25423,26412,30130,30669,32560,33806,34359,
#Partially deleted in new
chr16	70299168	70330066	chr16:70299168-70330066	0	+	70299297	70324626	789624	5	186,103,115,178,236,	0,25416,26405,30123,30662,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	70299177	70319709	chr16:70299177-70319709	0	+	70299297	70316004	789624	5	177,54,136,93,109,	0,15724,16791,18318,20423,
#Partially deleted in new
chr16	70299191	70325610	chr16:70299191-70325610	0	+	70299297	70316004	789624	6	163,54,136,93,103,37,	0,15710,16777,18304,25393,26382,
#Partially deleted in new
chr16	70299193	70333823	chr16:70299193-70333823	1	+	70299297	70333582	0	11	161,49,54,136,103,115,178,238,163,192,303,	0,13415,15708,16775,25391,26380,30098,30637,32528,33774,34327,
#Partially deleted in new
chr16	70299193	70366134	chr16:70299193-70366134	0	+	70299297	70316004	789624	5	161,136,103,115,50,	0,16775,25391,26380,66891,
#Partially deleted in new
chr16	70299208	70329470	chr16:70299208-70329470	0	+	70299297	70314824	789624	7	146,49,151,136,103,115,179,	0,13400,15596,16760,25376,26365,30083,
#Partially deleted in new
chr16	70299213	70366260	chr16:70299213-70366260	0	+	70299297	70366260	789624	8	141,49,54,136,93,103,115,176,	0,13395,15688,16755,18282,25371,26360,66871,
#Partially deleted in new
chr16	70299223	70372582	chr16:70299223-70372582	3	+	70299297	70371986	789624	12	131,49,54,136,93,103,115,178,238,163,192,658,	0,13385,15678,56888,62194,65319,65793,66861,67400,70999,72148,72701,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	70299333	70317942	chr16:70299333-70317942	0	+	70299333	70299333	8553170	5	21,49,54,136,447,	0,13275,15568,16635,18162,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	70315639	70346747	chr16:70315639-70346747	3	-	70315639	70315639	789624	5	503,118,141,160,549,	0,1616,18180,26300,30559,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	70333782	70346747	chr16:70333782-70346747	0	-	70333782	70333782	8553170	3	178,160,549,	0,8157,12416,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	70346828	70373383	chr16:70346828-70373383	3	+	70346991	70371986	789624	12	220,49,51,136,93,103,115,178,238,163,192,1459,	0,3728,8656,9283,14589,17714,18188,19256,19795,23394,24543,25096,
#Partially deleted in new
chr16	70346860	70361496	chr16:70346860-70361496	0	+	70346860	70346860	8553170	6	188,49,51,136,61,79,	0,3696,8624,9251,9985,14557,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	70346870	70355843	chr16:70346870-70355843	0	+	70346870	70346870	8553170	3	178,49,359,	0,3686,8614,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	70346882	70373381	chr16:70346882-70373381	0	+	70346991	70361514	789624	12	166,49,51,136,219,103,115,178,238,163,192,1457,	0,3674,8602,9229,14535,17660,18134,19202,19741,23340,24489,25042,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	70346895	70361510	chr16:70346895-70361510	0	+	70346991	70356147	789624	5	153,51,136,118,93,	0,8589,9216,13881,14522,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	70346900	70360865	chr16:70346900-70360865	0	+	70346900	70346900	8553170	6	148,49,51,136,84,89,	0,3656,8584,9211,9922,13876,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	70346904	70361498	chr16:70346904-70361498	0	+	70346991	70347973	789624	6	144,116,49,51,136,81,	0,970,3652,8580,9207,14513,
#Partially deleted in new
chr16	70346904	70364643	chr16:70346904-70364643	0	+	70346991	70356166	789624	6	144,49,51,119,93,101,	0,3652,8580,9224,14513,17638,
#Partially deleted in new
chr16	70346904	70372089	chr16:70346904-70372089	0	+	70346991	70361497	789624	11	144,49,51,93,103,115,330,238,163,192,165,	0,3652,8580,14513,17638,18112,19028,19719,23318,24467,25020,
#Partially deleted in new
chr16	70346943	70372297	chr16:70346943-70372297	1	+	70346991	70371986	789624	11	105,49,51,136,103,115,178,238,163,192,373,	0,3613,8541,9168,17599,18073,19141,19680,23279,24428,24981,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	70349084	70372166	chr16:70349084-70372166	3	-	70349084	70349084	8553170	6	513,361,117,61,84,57,	0,16986,18967,22220,22370,23025,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	70355894	70366794	chr16:70355894-70366794	0	+	70355894	70355894	8553170	3	353,115,710,	0,9122,10190,
#Partially deleted in new
chr16	70356860	70372329	chr16:70356860-70372329	0	+	70356860	70371986	789624	9	46,93,103,115,178,238,163,192,405,	0,4557,7682,8156,9224,9763,13362,14511,15064,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	70363300	70373376	chr16:70363300-70373376	0	+	70363300	70363300	8553170	5	2962,238,163,192,1452,	0,3323,6922,8071,8624,
#Partially deleted in new
chr16	70364130	70366184	chr16:70364130-70366184	0	+	70364130	70364130	8553170	3	515,115,100,	0,886,1954,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	70364542	70373070	chr16:70364542-70373070	0	+	70364542	70364542	8553170	6	103,115,178,238,1341,1146,	0,474,1542,2081,5680,7382,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	70375977	70400638	chr16:70375977-70400638	1	-	70381688	70398530	789624	6	5885,120,46,180,194,2447,	0,6827,7212,12389,19004,22214,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	70379434	70439088	chr16:70379434-70439088	3	-	70381688	70398530	789624	7	2428,120,46,180,194,1342,140,	0,3370,3755,8932,15547,18757,59514,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	70379456	70399502	chr16:70379456-70399502	3	+	70379456	70379456	8553170	2	210,380,	0,19666,
#Partially deleted in new
chr16	70381573	70393759	chr16:70381573-70393759	0	-	70381573	70381573	8553170	5	289,120,46,180,54,	0,1231,1616,6793,12132,
#Partially deleted in new
chr16	70398918	70439237	chr16:70398918-70439237	0	-	70398918	70398918	8553170	2	615,289,	0,40030,
#Partially deleted in new
chr16	70399082	70423073	chr16:70399082-70423073	0	-	70399082	70399082	8553170	2	451,130,	0,23861,
#Partially deleted in new
chr16	70399449	70439022	chr16:70399449-70439022	0	-	70399449	70399449	8553170	3	84,399,74,	0,1246,39499,
#Deleted in new
chr16	70444673	70444912	chr16:70444673-70444912	7	-	70444673	70444673	16724991	1	239,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	70445292	70445399	chr16:70445292-70445399	3	-	70445292	70445292	8553170	1	107,	0,
#Partially deleted in new
chr16	70454420	70480274	chr16:70454420-70480274	3	+	70463190	70479680	789624	24	210,104,152,51,126,73,98,81,120,172,113,102,171,65,371,211,167,222,144,120,188,100,224,696,	0,8748,9202,10705,11711,12461,12953,13465,14428,14731,15893,16550,16761,18120,18562,19708,20107,20369,20929,21227,23851,24130,24759,25158,
#Partially deleted in new
chr16	70454594	70480274	chr16:70454594-70480274	1	+	70463190	70479680	789624	24	36,104,152,147,126,73,98,81,120,172,113,102,171,65,371,211,167,222,66,120,188,100,224,696,	0,8574,9028,10435,11537,12287,12779,13291,14254,14557,15719,16376,16587,17946,18388,19534,19933,20195,20755,21053,23677,23956,24585,24984,
#Partially deleted in new
chr16	70454594	70480274	chr16:70454594-70480274	0	+	70454594	70454594	8553170	22	36,104,152,51,126,590,81,120,113,102,171,65,371,211,69,222,144,120,188,100,607,696,	0,8574,9028,10531,11537,12287,13291,14254,15719,16376,16587,17946,18388,19534,20031,20195,20755,21053,23677,23956,24202,24984,
#Partially deleted in new
chr16	70454594	70468974	chr16:70454594-70468974	0	+	70454594	70454594	8553170	6	36,104,152,126,1085,126,	0,8574,9028,11537,12287,14254,
#Partially deleted in new
chr16	70454594	70480273	chr16:70454594-70480273	1	+	70473097	70479680	789624	16	36,120,113,102,155,92,371,205,167,222,144,120,188,100,224,695,	0,14254,15719,16376,16603,17919,18388,19540,19933,20195,20755,21053,23677,23956,24585,24984,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	70454594	70466206	chr16:70454594-70466206	0	+	70463190	70466206	789624	6	36,120,104,152,51,75,	0,7578,8574,9028,10531,11537,
#Partially deleted in new
chr16	70454594	70466939	chr16:70454594-70466939	0	+	70463190	70466939	789624	7	36,63,104,152,51,126,58,	0,3318,8574,9028,10531,11537,12287,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	70454594	70466544	chr16:70454594-70466544	0	+	70454594	70454594	8553170	5	36,104,152,51,413,	0,8574,9028,10531,11537,
#Partially deleted in new
chr16	70454726	70466174	chr16:70454726-70466174	0	+	70463190	70466174	789624	5	214,104,152,51,43,	0,8442,8896,10399,11405,
#Partially deleted in new
chr16	70454726	70466908	chr16:70454726-70466908	0	+	70463190	70466908	789624	6	79,104,152,51,126,27,	0,8442,8896,10399,11405,12155,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	70474624	70479681	chr16:70474624-70479681	0	+	70474624	70476242	789624	9	70,222,144,120,148,188,100,224,103,	0,165,725,1023,1562,3647,3926,4555,4954,
#Deleted in new
chr16	70474788	70475853	chr16:70474788-70475853	0	+	70474788	70474788	8553170	3	223,144,206,	0,561,859,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	70477357	70480274	chr16:70477357-70480274	0	+	70477357	70477357	8553170	3	1102,853,696,	0,1193,2221,
#Partially deleted in new
chr16	70480567	70523558	chr16:70480567-70523558	0	-	70516016	70523543	789624	20	577,129,102,84,93,117,63,166,167,119,134,59,158,106,194,175,173,115,83,186,	0,791,1196,1524,2161,3285,9762,15698,16653,17369,20390,27838,28663,29348,31671,33767,35300,37058,39081,42805,
#Partially deleted in new
chr16	70480568	70523565	chr16:70480568-70523565	3	-	70481009	70523543	789624	19	576,129,102,84,93,117,63,166,167,119,134,59,158,106,194,175,115,83,193,	0,790,1195,1523,2160,3284,9761,15697,16652,17368,20389,27837,28662,29347,31670,33766,37057,39080,42804,
#Partially deleted in new
chr16	70480570	70523539	chr16:70480570-70523539	0	-	70480570	70480570	8553170	17	574,129,102,84,93,117,63,166,167,119,134,983,106,194,175,115,167,	0,788,1193,1521,2158,3282,9759,15695,16650,17366,20387,27835,29345,31668,33764,37055,42802,
#Partially deleted in new
chr16	70480571	70523554	chr16:70480571-70523554	1	-	70481009	70523543	789624	18	573,129,102,84,93,117,166,167,119,134,59,158,106,194,175,115,83,182,	0,787,1192,1520,2157,3281,15694,16649,17365,20386,27834,28659,29344,31667,33763,37054,39077,42801,
#Partially deleted in new
chr16	70480573	70523531	chr16:70480573-70523531	0	-	70508800	70523531	789624	20	571,129,102,84,93,117,63,166,167,119,134,59,159,158,106,194,175,115,83,159,	0,785,1190,1518,2155,3279,9756,15692,16647,17363,20384,27832,28092,28657,29342,31665,33761,37052,39075,42799,
#Partially deleted in new
chr16	70480577	70508757	chr16:70480577-70508757	0	-	70480577	70480577	8553170	11	567,129,102,84,93,117,114,167,119,134,352,	0,781,1186,1514,2151,3275,15688,16643,17359,20380,27828,
#Deleted in new
chr16	70480866	70482794	chr16:70480866-70482794	0	-	70481009	70482794	789624	4	278,129,102,66,	0,492,897,1862,
#Partially deleted in new
chr16	70482379	70496372	chr16:70482379-70496372	0	-	70482379	70482379	8553170	4	442,117,63,107,	0,1473,7950,13886,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	70497972	70501597	chr16:70497972-70501597	0	-	70497972	70497972	8553170	2	83,640,	0,2985,
#Partially deleted in new
chr16	70509871	70523540	chr16:70509871-70523540	0	-	70509871	70509871	8553170	6	150,194,175,115,83,168,	0,2367,4463,7754,9777,13501,
#Partially deleted in new
chr16	70512266	70523550	chr16:70512266-70523550	1	-	70512267	70523543	789624	5	70,144,115,83,178,	0,2099,5359,7382,11106,
#Partially deleted in new
chr16	70512272	70523200	chr16:70512272-70523200	0	-	70512272	70519671	789624	5	160,175,115,83,114,	0,2062,5353,7376,10814,
#Partially deleted in new
chr16	70512318	70523554	chr16:70512318-70523554	0	-	70514460	70523543	789624	4	114,175,83,182,	0,2016,7330,11054,
#Partially deleted in new
chr16	70512373	70523518	chr16:70512373-70523518	0	-	70517723	70523518	789624	5	59,175,115,55,146,	0,1961,5252,7303,10999,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr16	70523787	70577668	chr16:70523787-70577668	3	+	70526656	70571813	0	26	141,140,327,173,142,113,138,104,166,96,73,152,156,156,144,123,155,175,206,157,126,213,99,144,105,5996,	0,2799,5085,6957,8691,11520,14535,15316,17881,20650,24582,30658,31263,32391,33098,36681,37842,40088,41277,41580,43623,44495,45255,46218,47307,47885,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	70523790	70528893	chr16:70523790-70528893	0	+	70526656	70528893	789624	4	138,154,140,21,	0,1073,2796,5082,
#Partially deleted in new
chr16	70523812	70529018	chr16:70523812-70529018	0	+	70526656	70529018	789624	3	243,140,146,	0,2774,5060,
#Partially deleted in new
chr16	70523892	70529170	chr16:70523892-70529170	0	+	70528997	70529170	789624	2	36,298,	0,4980,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	70524549	70526669	chr16:70524549-70526669	0	+	70526656	70526669	8553170	2	468,83,	0,2037,
#Partially deleted in new
chr16	70526900	70529091	chr16:70526900-70529091	0	+	70528997	70529091	789624	2	114,219,	0,1972,
#Partially deleted in new
chr16	70529508	70529588	chr16:70529508-70529588	3	+	70529508	70529508	789624	1	80,	0,
#Deleted in new
chr16	70538004	70538098	chr16:70538004-70538098	3	+	70538004	70538004	789624	1	94,	0,
#Partially deleted in new
chr16	70538394	70548512	chr16:70538394-70548512	0	+	70538394	70538394	8553170	5	66,104,166,96,143,	0,709,3274,6043,9975,
#Partially deleted in new
chr16	70541738	70556206	chr16:70541738-70556206	0	+	70541738	70550660	789624	7	96,96,73,29,152,156,28,	0,2699,6631,8911,12707,13312,14440,
#Partially deleted in new
chr16	70550202	70557029	chr16:70550202-70557029	0	+	70550202	70550202	8553170	5	476,152,156,156,144,	0,4243,4848,5976,6683,
#Partially deleted in new
chr16	70554105	70556597	chr16:70554105-70556597	0	+	70554105	70554105	8553170	3	492,156,419,	0,945,2073,
#Partially deleted in new
chr16	70560349	70564033	chr16:70560349-70564033	0	+	70560349	70560349	8553170	3	242,155,158,	0,1280,3526,
#Partially deleted in new
chr16	70561348	70567541	chr16:70561348-70567541	0	+	70561348	70561348	8553170	5	436,175,206,157,131,	0,2527,3716,4019,6062,
#Partially deleted in new
chr16	70563728	70565720	chr16:70563728-70565720	0	+	70563728	70563728	8553170	3	322,206,353,	0,1336,1639,
#Partially deleted in new
chr16	70569914	70572299	chr16:70569914-70572299	0	+	70569914	70569914	8553170	3	235,105,627,	0,1180,1758,
#Partially deleted in new
chr16	70576300	70577670	chr16:70576300-70577670	0	+	70576300	70576300	8553170	2	48,353,	0,1017,
#Partially deleted in new
chr16	70579894	70660682	chr16:70579894-70660682	3	+	70646947	70660187	0	7	155,428,134,78,162,136,686,	0,66653,74643,76707,77065,79723,80102,
#Partially deleted in new
chr16	70579908	70654671	chr16:70579908-70654671	0	+	70646947	70654671	789624	3	141,428,134,	0,66639,74629,
#Partially deleted in new
chr16	70646562	70656671	chr16:70646562-70656671	0	+	70646562	70646562	8553170	2	413,70,	0,10039,
#Partially deleted in new
chr16	70646564	70660682	chr16:70646564-70660682	1	+	70646947	70660187	0	6	411,134,78,162,136,686,	0,7973,10037,10395,13053,13432,
#Partially deleted in new
chr16	70646872	70657357	chr16:70646872-70657357	0	+	70646872	70646872	8553170	3	103,78,395,	0,9729,10090,
#Partially deleted in new
chr16	70654098	70660269	chr16:70654098-70660269	1	+	70654584	70660187	789624	6	218,134,78,162,136,273,	0,439,2503,2861,5519,5898,
#Partially deleted in new
chr16	70661203	70686066	chr16:70661203-70686066	3	-	70663676	70685791	789624	15	3246,166,177,75,223,98,108,158,9,75,92,85,74,62,344,	0,3394,3716,4262,13102,15677,16588,17048,18111,18426,18582,18767,19590,19760,24519,
#Deleted in new
chr16	70661666	70665836	chr16:70661666-70665836	3	+	70661666	70661666	8553170	1	4170,	0,
#Partially deleted in new
chr16	70663676	70685791	chr16:70663676-70685791	1	-	70663676	70685791	789624	15	773,166,177,75,223,98,108,162,15,62,92,85,74,62,69,	0,921,1243,1789,10629,13204,14115,14575,15950,15966,16109,16294,17117,17287,22046,
#Partially deleted in new
chr16	70674319	70678339	chr16:70674319-70678339	0	-	70674319	70678339	789624	4	113,98,108,88,	0,2561,3472,3932,
#Deleted in new
chr16	70676948	70680025	chr16:70676948-70680025	0	-	70676948	70680025	789624	6	30,108,158,75,92,55,	0,843,1303,2681,2837,3022,
#Partially deleted in new
chr16	70687438	70801161	chr16:70687438-70801161	3	-	70687927	70800900	789624	19	652,151,80,119,175,133,157,66,145,64,150,135,107,110,108,63,168,151,365,	0,5382,8105,9700,11198,44056,56984,75101,75442,84670,93351,94430,95594,96006,96674,97337,98263,98776,113358,
#Partially deleted in new
chr16	70687438	70695593	chr16:70687438-70695593	0	-	70688088	70695593	789624	2	652,50,	0,8105,
#Partially deleted in new
chr16	70687438	70800982	chr16:70687438-70800982	0	-	70744575	70800900	789624	13	652,151,80,119,175,133,157,66,44,69,168,151,186,	0,5382,8105,9700,11198,44056,56984,75101,75442,97331,98263,98776,113358,
#Partially deleted in new
chr16	70687440	70801160	chr16:70687440-70801160	0	-	70785850	70800900	789624	18	650,151,80,119,175,133,157,66,145,64,150,135,107,110,108,63,168,364,	0,5380,8103,9698,11196,44054,56982,75099,75440,84668,93349,94428,95592,96004,96672,97335,98261,113356,
#Deleted in new
chr16	70687440	70691049	chr16:70687440-70691049	0	-	70687440	70687440	8553170	1	3609,	0,
#Partially deleted in new
chr16	70687441	70700245	chr16:70687441-70700245	1	-	70687927	70698768	789624	6	649,151,80,119,175,987,	0,5379,8102,9697,11195,11817,
#Partially deleted in new
chr16	70688039	70695856	chr16:70688039-70695856	0	-	70688039	70688039	8553170	3	51,151,313,	0,4781,7504,
#Partially deleted in new
chr16	70688042	70744580	chr16:70688042-70744580	0	-	70688042	70744580	789624	7	48,151,80,35,175,133,158,	0,4778,7501,9096,10594,43452,56380,
#Partially deleted in new
chr16	70696889	70744638	chr16:70696889-70744638	0	-	70696889	70696889	8553170	4	368,175,133,216,	0,1747,34605,47533,
#Deleted in new
chr16	70713986	70716890	chr16:70713986-70716890	3	+	70713986	70713986	8553170	1	2904,	0,
#Partially deleted in new
chr16	70731274	70745082	chr16:70731274-70745082	0	-	70731274	70731274	8553170	4	85,133,157,57,	0,220,13148,13751,
#Partially deleted in new
chr16	70731307	70762891	chr16:70731307-70762891	0	-	70731307	70762891	789624	4	320,157,66,11,	0,13115,31232,31573,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	70747056	70747926	chr16:70747056-70747926	3	+	70747056	70747056	8553170	2	197,354,	0,516,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	70755097	70773251	chr16:70755097-70773251	3	+	70755097	70755097	8553170	5	152,75,106,114,4406,	0,915,6055,11345,13748,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	70755132	70773242	chr16:70755132-70773242	1	+	70755132	70755132	789624	6	117,75,106,114,98,1635,	0,880,6020,11310,13713,16475,
#Deleted in new
chr16	70768355	70768785	chr16:70768355-70768785	3	+	70768355	70768355	8553170	1	430,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	70768966	70770221	chr16:70768966-70770221	3	-	70768966	70768966	8553170	1	1255,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	70778432	70779145	chr16:70778432-70779145	3	+	70778432	70778432	8553170	1	713,	0,
#Partially deleted in new
chr16	70780797	70786427	chr16:70780797-70786427	0	-	70780797	70780797	8553170	7	142,135,107,110,108,63,726,	0,1071,2235,2647,3315,3978,4904,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	70802082	70802840	chr16:70802082-70802840	3	-	70802082	70802082	8553170	1	758,	0,
#Partially deleted in new
chr16	70807377	71230689	chr16:70807377-71230689	3	-	70807579	71186895	0	86	685,225,231,151,164,213,220,278,159,199,170,222,208,148,166,139,213,208,98,161,219,143,288,103,190,152,236,205,118,239,169,100,100,199,173,160,120,183,209,219,627,163,142,184,138,215,174,174,180,169,240,150,192,128,137,134,128,178,138,210,120,79,141,314,144,144,274,239,153,165,136,101,236,68,224,119,100,184,202,125,200,135,120,126,158,128,	0,2405,10964,19883,20888,22240,25470,26509,28298,30312,32686,42348,43070,47750,50327,52690,53311,54670,55707,58791,61192,64659,66927,67439,71919,72227,75282,76542,82209,84268,84983,87071,88603,93626,96247,96527,99994,100874,101275,110833,113213,128574,131236,134258,136434,145043,147997,152269,154581,157350,163142,165965,166451,166795,167156,167758,171536,174013,177807,180546,181015,183940,184692,210751,212796,218005,220224,224301,253126,254791,257327,259912,261889,272507,280923,286439,308318,322262,329773,345281,355153,368229,371550,377487,379383,423184,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr16	70807494	70866297	chr16:70807494-70866297	0	-	70865344	70866297	789624	22	568,225,124,231,151,164,213,220,278,159,199,170,222,208,148,166,139,213,208,98,246,129,	0,2288,3817,10847,19766,20771,22123,25353,26392,28181,30195,32569,42231,42953,47633,50210,52573,53194,54553,55590,57623,58674,
#Partially deleted in new
chr16	70817110	70818493	chr16:70817110-70818493	0	-	70817110	70817110	8553170	2	379,152,	0,1231,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	70852697	70852814	chr16:70852697-70852814	3	+	70852697	70852697	8553170	1	117,	0,
#Partially deleted in new
chr16	70857716	70863170	chr16:70857716-70863170	0	-	70860857	70863170	789624	4	154,139,213,86,	0,2351,2972,5368,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr16	70893535	70973930	chr16:70893535-70973930	0	-	70893535	70893535	8553170	20	1013,100,199,173,160,120,183,209,627,152,163,142,184,174,174,180,169,240,150,102,	0,2445,7468,10089,10369,13836,14716,15117,27055,40039,42416,45078,48100,61839,66111,68423,71192,76984,79807,80293,
#Partially deleted in new
chr16	70941386	70974569	chr16:70941386-70974569	0	-	70941386	70941386	8553170	10	433,174,174,180,169,240,150,192,128,36,	0,13988,18260,20572,23341,29133,31956,32442,32786,33147,
#Partially deleted in new
chr16	70959323	70962015	chr16:70959323-70962015	0	-	70959629	70962015	789624	2	497,57,	0,2635,
#Partially deleted in new
chr16	70985056	71129720	chr16:70985056-71129720	0	-	70988505	71129720	789624	18	266,210,120,141,314,144,274,239,153,165,136,101,236,68,224,119,100,81,	0,2867,3336,7013,33072,35117,42545,46622,75447,77112,79648,82233,84210,94828,103244,108760,130639,144583,
#Partially deleted in new
chr16	71018383	71060586	chr16:71018383-71060586	0	-	71020298	71060586	789624	4	59,144,239,83,	0,1790,13295,42120,
#Partially deleted in new
chr16	71025479	71186798	chr16:71025479-71186798	0	-	71152747	71186798	789624	19	47,274,239,153,165,136,101,236,68,224,119,100,184,202,125,135,120,126,38,	0,2122,6199,35024,36689,39225,41810,43787,54405,62821,68337,90216,104160,111671,127179,150127,153448,159385,161281,
#Partially deleted in new
chr16	71027109	71230689	chr16:71027109-71230689	1	-	71027589	71186895	0	20	766,239,153,165,136,101,236,68,224,119,100,184,202,125,200,135,120,126,158,128,	0,4569,33394,35059,37595,40180,42157,52775,61191,66707,88586,102530,110041,125549,135421,148497,151818,157755,159651,203452,
#Partially deleted in new
chr16	71031410	71230722	chr16:71031410-71230722	1	-	71031674	71230687	0	19	507,153,165,136,101,236,68,224,119,100,184,202,125,200,135,120,126,158,93,	0,29093,30758,33294,35879,37856,48474,56890,62406,84285,98229,105740,121248,131120,144196,147517,153454,155350,199219,
#Partially deleted in new
chr16	71031411	71162610	chr16:71031411-71162610	0	-	71066830	71162610	789624	16	506,153,165,136,151,101,236,45,68,224,119,100,184,202,125,80,	0,29092,30757,33293,35371,35878,37855,44532,48473,56889,62405,84284,98228,105739,121247,131119,
#Partially deleted in new
chr16	71031416	71063032	chr16:71031416-71063032	0	-	71031416	71031416	8553170	3	501,153,864,	0,29087,30752,
#Partially deleted in new
chr16	71031466	71230714	chr16:71031466-71230714	1	-	71031674	71230687	0	19	451,153,165,136,101,236,68,224,119,100,184,202,125,200,135,120,126,158,55,	0,29037,30702,33238,35823,37800,48418,56834,62350,84229,98173,105684,121192,131064,144140,147461,153398,155294,199193,
#Partially deleted in new
chr16	71066476	71230701	chr16:71066476-71230701	1	-	71067237	71230687	789624	15	914,236,68,224,119,100,184,202,125,200,135,120,126,158,42,	0,2790,13408,21824,27340,49219,63163,70674,86182,96054,109130,112451,118388,120284,164183,
#Deleted in new
chr16	71066579	71069445	chr16:71066579-71069445	0	-	71066830	71069445	789624	3	354,101,179,	0,710,2687,
#Partially deleted in new
chr16	71069351	71080386	chr16:71069351-71080386	0	-	71069351	71069351	8553170	3	151,68,338,	0,10533,10697,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	71080865	71093667	chr16:71080865-71093667	3	+	71080865	71080865	8553170	4	116,165,193,77,	0,6860,9317,12725,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	71080868	71090490	chr16:71080868-71090490	0	+	71080868	71080868	8553170	3	113,165,308,	0,6857,9314,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	71113351	71114000	chr16:71113351-71114000	3	+	71113351	71113351	8553170	2	287,196,	0,453,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	71131362	71175638	chr16:71131362-71175638	0	-	71133228	71175638	789624	5	1921,202,125,200,32,	0,5788,21296,31168,44244,
#Partially deleted in new
chr16	71133004	71152891	chr16:71133004-71152891	0	-	71133004	71133004	8553170	3	279,202,233,	0,4146,19654,
#Partially deleted in new
chr16	71137348	71179026	chr16:71137348-71179026	0	-	71137348	71137348	8553170	5	4,125,200,260,99,	0,15310,25182,38258,41579,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	71186776	71230695	chr16:71186776-71230695	0	-	71186776	71186895	789624	3	142,333,134,	0,16948,43785,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	71186786	71230704	chr16:71186786-71230704	0	-	71186786	71186895	789624	3	132,333,75,	0,16938,43843,
#Partially deleted in new
chr16	71281388	71289609	chr16:71281388-71289609	3	-	71283607	71285920	789624	3	4551,60,258,	0,7489,7963,
#Partially deleted in new
chr16	71282299	71289539	chr16:71282299-71289539	1	-	71283607	71285920	789624	3	3640,60,404,	0,6578,6836,
#Partially deleted in new
chr16	71285441	71289715	chr16:71285441-71289715	0	-	71285441	71285920	789624	3	498,60,29,	0,3436,4245,
#Partially deleted in new
chr16	71285444	71288745	chr16:71285444-71288745	0	-	71285444	71285920	789624	2	495,70,	0,3231,
#Partially deleted in new
chr16	71285523	71289414	chr16:71285523-71289414	0	-	71285523	71285920	789624	2	416,279,	0,3612,
#Partially deleted in new
chr16	71285604	71288696	chr16:71285604-71288696	0	-	71285604	71285920	789624	2	335,141,	0,2951,
#Partially deleted in new
chr16	71285649	71289427	chr16:71285649-71289427	0	-	71285649	71285920	789624	2	290,342,	0,3436,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	71286459	71289429	chr16:71286459-71289429	0	-	71286459	71286459	8553170	2	2478,294,	0,2676,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	71301582	71302869	chr16:71301582-71302869	3	+	71301582	71301582	8553170	2	213,221,	0,1066,
#Partially deleted in new
chr16	71358712	71390436	chr16:71358712-71390436	1	+	71358792	71385622	789624	9	174,77,90,81,57,78,56,72,688,	0,13440,16032,18954,24006,24654,25257,26864,31036,
#Partially deleted in new
chr16	71358715	71390438	chr16:71358715-71390438	3	+	71358792	71389865	789624	11	171,77,90,81,57,78,56,40,54,72,690,	0,13437,16029,18951,24003,24651,25254,25623,26067,26861,31033,
#Partially deleted in new
chr16	71358793	71389826	chr16:71358793-71389826	0	+	71358793	71389826	789624	10	93,77,90,81,57,78,56,40,54,78,	0,13359,15951,18873,23925,24573,25176,25545,25989,30955,
#Partially deleted in new
chr16	71372177	71385636	chr16:71372177-71385636	0	+	71372177	71385636	789624	8	52,81,57,78,50,40,54,60,	0,5489,10541,11189,11792,12161,12605,13399,
#Partially deleted in new
chr16	71385342	71389866	chr16:71385342-71389866	0	+	71385342	71385342	8553170	2	306,118,	0,4406,
#Partially deleted in new
chr16	71410439	71426464	chr16:71410439-71426464	3	-	71410439	71410439	5263520	3	95,131,304,	0,4425,15721,
#Partially deleted in new
chr16	71420482	71421518	chr16:71420482-71421518	7	+	71420482	71420482	16724991	2	124,209,	0,827,
#Partially deleted in new
chr16	71430261	71442060	chr16:71430261-71442060	3	-	71430261	71433324	789624	10	105,74,154,142,242,216,59,23,407,92,	0,406,859,1159,1499,1848,2403,2608,2752,11707,
#Deleted in new
chr16	71443054	71443856	chr16:71443054-71443856	7	-	71443054	71443054	16724991	2	75,118,	0,684,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	71447596	71462759	chr16:71447596-71462759	1	-	71448092	71454075	789624	5	2286,108,177,65,550,	0,5646,6445,9167,14613,
#Partially deleted in new
chr16	71447596	71462214	chr16:71447596-71462214	1	-	71448092	71454075	789624	6	2286,108,177,50,65,556,	0,5646,6445,8475,9167,14062,
#Partially deleted in new
chr16	71447596	71453973	chr16:71447596-71453973	1	-	71448092	71449850	789624	2	2289,731,	0,5646,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	71447596	71452649	chr16:71447596-71452649	0	-	71447596	71447596	8553170	1	5053,	0,
#Partially deleted in new
chr16	71447596	71456828	chr16:71447596-71456828	3	-	71448092	71456787	8553170	4	2289,108,127,65,	0,5646,6445,9167,
#Partially deleted in new
chr16	71447599	71489311	chr16:71447599-71489311	2	-	71463637	71482114	789624	12	2286,108,127,50,65,161,103,114,127,62,160,314,	0,5643,6442,8472,9164,14610,15946,30628,31279,34482,36989,41398,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	71447614	71484618	chr16:71447614-71484618	1	-	71463637	71479002	8553170	9	2271,108,177,65,939,103,114,127,30,	0,5628,6427,9149,14595,15931,30613,31264,36974,
#Partially deleted in new
chr16	71447635	71462252	chr16:71447635-71462252	0	-	71447635	71447635	8553170	3	2250,65,43,	0,9128,14574,
#Partially deleted in new
chr16	71448092	71454075	chr16:71448092-71454075	1	-	71448092	71454075	789624	3	1790,108,34,	0,5150,5949,
#Partially deleted in new
chr16	71449656	71462245	chr16:71449656-71462245	0	-	71449656	71454075	789624	5	229,48,177,65,36,	0,3646,4385,7107,12553,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	71453303	71463095	chr16:71453303-71463095	0	-	71453303	71454075	789624	5	47,177,65,161,108,	0,738,3460,8906,9684,
#Partially deleted in new
chr16	71456781	71462392	chr16:71456781-71462392	0	-	71456781	71456781	8553170	3	47,346,183,	0,4877,5428,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	71462277	71465941	chr16:71462277-71465941	3	+	71462277	71462277	8553170	2	109,2684,	0,980,
#Partially deleted in new
chr16	71462326	71464067	chr16:71462326-71464067	1	+	71462326	71462326	8553170	3	60,35,135,	0,931,1606,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	71464554	71482136	chr16:71464554-71482136	1	-	71467067	71482114	789624	4	2542,114,127,55,	0,13673,14324,17527,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	71473582	71489338	chr16:71473582-71489338	3	-	71475169	71482114	789624	6	2690,114,127,62,160,67,	0,4645,5296,8499,11006,15689,
#Partially deleted in new
chr16	71474378	71489314	chr16:71474378-71489314	1	-	71475169	71478912	789624	5	1894,114,127,160,317,	0,3849,4500,10210,14619,
#Partially deleted in new
chr16	71474383	71484610	chr16:71474383-71484610	1	-	71475169	71478291	789624	4	1889,114,62,22,	0,3844,7698,10205,
#Partially deleted in new
chr16	71474748	71484613	chr16:71474748-71484613	0	-	71478995	71482114	789624	5	1524,114,222,62,25,	0,3479,4130,7333,9840,
#Partially deleted in new
chr16	71474809	71489276	chr16:71474809-71489276	1	-	71475169	71482114	789624	6	1463,114,127,62,160,279,	0,3418,4069,7272,9779,14188,
#Partially deleted in new
chr16	71476162	71482322	chr16:71476162-71482322	0	-	71478475	71482114	789624	6	110,114,73,127,62,81,	0,2065,2272,2716,5919,6079,
#Partially deleted in new
chr16	71476193	71487110	chr16:71476193-71487110	0	-	71476193	71482114	789624	6	79,114,127,62,160,31,	0,2034,2685,5888,8395,10886,
#Deleted in new
chr16	71477885	71478999	chr16:71477885-71478999	0	-	71478219	71478999	789624	2	456,121,	0,993,
#Partially deleted in new
chr16	71478219	71484614	chr16:71478219-71484614	0	-	71478219	71478219	8553170	3	786,62,26,	0,3862,6369,
#Partially deleted in new
chr16	71478282	71546335	chr16:71478282-71546335	0	-	71478282	71482114	789624	6	59,127,62,160,65,59,	0,596,3799,6306,16671,67994,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	71478969	71565089	chr16:71478969-71565089	0	-	71478969	71482114	789624	5	36,62,160,132,197,	0,3112,5619,67232,85923,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	71482099	71489351	chr16:71482099-71489351	0	-	71482099	71482114	8553170	4	44,160,331,80,	0,2489,4980,7172,
#Partially deleted in new
chr16	71484620	71564940	chr16:71484620-71564940	0	-	71484620	71484620	8553170	5	128,65,154,57,48,	0,10333,29383,61656,80272,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	71513862	71517849	chr16:71513862-71517849	3	+	71513862	71513862	789624	3	73,122,245,	0,837,3742,
#Partially deleted in new
chr16	71525232	71538746	chr16:71525232-71538746	3	+	71536677	71537838	789624	3	132,193,2087,	0,887,11427,
#Partially deleted in new
chr16	71526250	71538597	chr16:71526250-71538597	1	+	71536677	71537838	789624	2	245,1938,	0,10409,
#Deleted in new
chr16	71536585	71537918	chr16:71536585-71537918	0	+	71536585	71536585	8553170	1	1333,	0,
#Partially deleted in new
chr16	71539833	71541825	chr16:71539833-71541825	3	-	71539833	71539833	8553170	2	95,314,	0,1678,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	71563429	71563528	chr16:71563429-71563528	3	-	71563429	71563429	8553170	1	99,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	71563652	71564938	chr16:71563652-71564938	0	-	71563652	71563652	8553170	1	1286,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	71565659	71577130	chr16:71565659-71577130	3	-	71568143	71576415	0	12	2625,99,84,129,153,53,139,159,68,105,247,122,	0,3051,4194,4609,5019,5946,6526,6870,7879,10262,10521,11349,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	71565788	71578187	chr16:71565788-71578187	3	+	71565788	71565788	789624	4	133,151,466,123,	0,262,6231,12276,
#Partially deleted in new
chr16	71567988	71569934	chr16:71567988-71569934	0	-	71567988	71567988	8553170	2	821,81,	0,1865,
#Deleted in new
chr16	71575077	71577092	chr16:71575077-71577092	0	-	71575077	71575077	8553170	3	949,247,84,	0,1103,1931,
#Deleted in new
chr16	71575402	71577092	chr16:71575402-71577092	0	-	71575402	71575402	8553170	2	1025,84,	0,1606,
#Deleted in new
chr16	71623707	71626816	chr16:71623707-71626816	3	-	71623707	71623707	8553170	2	246,219,	0,2890,
#Partially deleted in new
chr16	71626160	71629680	chr16:71626160-71629680	1	+	71626229	71629559	789624	2	536,314,	0,3206,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	71626183	71641262	chr16:71626183-71641262	1	+	71626229	71640404	789624	3	350,128,873,	0,3183,14206,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	71626185	71636465	chr16:71626185-71636465	3	+	71626229	71634803	789624	3	511,128,2273,	0,3181,8007,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	71626186	71641965	chr16:71626186-71641965	1	+	71626229	71641027	789624	3	510,128,1576,	0,3180,14203,
#Partially deleted in new
chr16	71629069	71634547	chr16:71629069-71634547	1	+	71629459	71634340	789624	3	99,128,355,	0,297,5123,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	71637834	71642114	chr16:71637834-71642114	0	+	71637834	71637834	8553170	2	1499,899,	0,3381,
#Partially deleted in new
chr16	71637834	71681854	chr16:71637834-71681854	0	-	71640899	71681854	789624	15	549,519,232,195,111,131,163,201,156,96,61,203,231,147,104,	0,2687,14955,17405,18736,20398,20818,26064,29343,31440,34427,38612,40920,41554,43916,
#Partially deleted in new
chr16	71637835	71663971	chr16:71637835-71663971	0	-	71644801	71663971	789624	9	548,519,105,232,195,111,131,163,73,	0,2686,6915,14954,17404,18735,20397,20817,26063,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr16	71644923	71724701	chr16:71644923-71724701	3	-	71648889	71714795	789624	19	5121,232,195,111,131,163,201,156,96,61,203,231,147,155,126,191,134,290,373,	0,7866,10316,11647,13309,13729,18975,22254,24351,27338,31523,33831,34465,36827,39552,45595,57674,69588,79405,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr16	71644927	71715529	chr16:71644927-71715529	1	-	71648889	71714795	789624	17	5117,232,195,111,131,163,156,96,61,203,231,147,155,126,191,134,1018,	0,7862,10312,11643,13305,13725,22250,24347,27334,31519,33827,34461,36823,39548,45591,57670,69584,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr16	71648169	71723882	chr16:71648169-71723882	1	-	71648889	71723867	789624	19	1875,232,195,111,131,163,201,156,96,61,203,231,147,155,126,191,134,290,114,	0,4620,7070,8401,10063,10483,15729,19008,21105,24092,28277,30585,31219,33581,36306,42349,54428,66342,75599,
#Partially deleted in new
chr16	71655026	71664212	chr16:71655026-71664212	3	+	71655026	71655026	8553170	2	99,307,	0,8879,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	71666090	71666197	chr16:71666090-71666197	3	+	71666090	71666090	8553170	1	107,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	71676587	71723812	chr16:71676587-71723812	0	-	71676587	71676587	8553170	8	2398,147,155,126,191,134,290,44,	0,2801,5163,7888,13931,26010,37924,47181,
#Partially deleted in new
chr16	71678922	71684657	chr16:71678922-71684657	0	-	71678922	71678922	8553170	4	63,147,155,182,	0,466,2828,5553,
#Deleted in new
chr16	71698566	71698701	chr16:71698566-71698701	3	-	71698566	71698566	789624	1	135,	0,
#Deleted in new
chr16	71723179	71724230	chr16:71723179-71724230	3	+	71723179	71723179	8553170	2	262,515,	0,536,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	71726974	71727992	chr16:71726974-71727992	3	+	71726974	71726974	8553170	1	1018,	0,
#Partially deleted in new
chr16	71728999	71809201	chr16:71728999-71809201	3	-	71733057	71789479	0	23	4160,99,161,108,127,142,105,128,90,123,55,141,114,56,99,81,96,77,97,142,125,204,439,	0,5609,9942,10234,16144,16473,17588,19251,20894,21210,24833,27019,29808,32512,35350,35646,36489,40623,42156,44221,45468,60279,79763,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	71731882	71747396	chr16:71731882-71747396	1	-	71733057	71746592	789624	7	1277,99,161,108,127,142,809,	0,2726,7059,7351,13261,13590,14705,
#Partially deleted in new
chr16	71731882	71809103	chr16:71731882-71809103	1	-	71733057	71789479	0	26	1277,99,161,108,127,142,105,128,90,123,55,141,114,56,99,81,96,77,97,142,125,204,43,350,173,341,	0,2726,7059,7351,13261,13590,14705,16368,18011,18327,21950,24136,26925,29629,32467,32763,33606,37740,39273,41338,42585,57396,74803,75918,76622,76880,
#Partially deleted in new
chr16	71732384	71809201	chr16:71732384-71809201	1	-	71733057	71789479	0	24	775,99,161,108,127,142,105,128,90,123,55,141,114,56,99,81,96,9,77,97,142,125,204,439,	0,2224,6557,6849,12759,13088,14203,15866,17509,17825,21448,23634,26423,29127,31965,32261,33104,35492,37238,38771,40836,42083,56894,76378,
#Partially deleted in new
chr16	71732384	71734599	chr16:71732384-71734599	0	-	71732384	71732384	8553170	2	775,29,	0,2186,
#Partially deleted in new
chr16	71738941	71808982	chr16:71738941-71808982	0	-	71765604	71789479	789624	17	161,108,127,142,105,128,90,123,360,103,81,162,113,142,125,204,220,	0,292,6202,6531,7646,9309,10952,11268,17023,25404,25704,26547,32198,34279,35526,50337,69821,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	71742281	71771199	chr16:71742281-71771199	0	-	71742281	71742281	8553170	16	1312,127,142,105,128,90,123,55,141,114,56,99,81,96,81,44,	0,2862,3191,4306,5969,7612,7928,11551,13737,16526,19230,22068,22364,23207,27337,28874,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	71748267	71751337	chr16:71748267-71751337	0	-	71748267	71748267	8553170	4	111,90,271,75,	0,1626,1942,2995,
#Partially deleted in new
chr16	71749918	71808834	chr16:71749918-71808834	0	-	71765519	71789479	789624	16	65,123,55,141,114,56,99,81,96,81,97,142,125,204,173,72,	0,291,3914,6100,8889,11593,14431,14727,15570,19700,21237,23302,24549,39360,58586,58844,
#Partially deleted in new
chr16	71750209	71764675	chr16:71750209-71764675	0	-	71758873	71764675	789624	6	123,55,141,114,99,30,	0,3623,5809,8598,14140,14436,
#Partially deleted in new
chr16	71753569	71756055	chr16:71753569-71756055	0	-	71753569	71753569	8553170	2	318,37,	0,2449,
#Deleted in new
chr16	71758401	71758487	chr16:71758401-71758487	3	-	71758401	71758401	789624	1	86,	0,
#Partially deleted in new
chr16	71758896	71808832	chr16:71758896-71808832	0	-	71772990	71789479	789624	12	25,56,99,81,96,77,97,94,142,125,204,70,	0,2615,5453,5749,6592,10726,12259,14063,14324,15571,30382,49866,
#Partially deleted in new
chr16	71771159	71808294	chr16:71771159-71808294	0	-	71771159	71789479	789624	5	93,142,125,204,280,	0,2061,3308,18119,36855,
#Partially deleted in new
chr16	71773254	71808813	chr16:71773254-71808813	0	-	71773254	71789479	789624	5	108,125,204,136,309,	0,1213,16024,34760,35250,
#Partially deleted in new
chr16	71773269	71808493	chr16:71773269-71808493	0	-	71773269	71789479	789624	4	93,125,204,137,	0,1198,16009,35087,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	71774331	71809150	chr16:71774331-71809150	0	-	71774331	71774331	8553170	4	261,204,136,388,	0,14947,33683,34431,
#Partially deleted in new
chr16	71774518	71808832	chr16:71774518-71808832	0	-	71774518	71789479	789624	3	74,204,328,	0,14760,33986,
#Partially deleted in new
chr16	71774536	71808814	chr16:71774536-71808814	0	-	71774536	71789479	789624	5	56,202,136,173,52,	0,14742,33478,33968,34226,
#Deleted in new
chr16	71777602	71777834	chr16:71777602-71777834	7	-	71777602	71777602	16724991	1	232,	0,
#Partially deleted in new
chr16	71789319	71808813	chr16:71789319-71808813	0	-	71789319	71789479	789624	5	163,38,136,173,51,	0,18481,18695,19185,19443,
#Partially deleted in new
chr16	71789322	71808813	chr16:71789322-71808813	0	-	71789322	71789322	8553170	4	160,43,350,51,	0,17363,18478,19440,
#Partially deleted in new
chr16	71789399	71809103	chr16:71789399-71809103	0	-	71789399	71789479	789624	6	83,43,38,136,173,341,	0,17286,18401,18615,19105,19363,
#Deleted in new
chr16	71807906	71809084	chr16:71807906-71809084	0	-	71807906	71807906	8553170	3	244,167,163,	0,598,1015,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	71833786	71835932	chr16:71833786-71835932	7	+	71833786	71833786	16724991	3	108,448,325,	0,519,1821,
#Partially deleted in new
chr16	71845990	71857333	chr16:71845990-71857333	3	+	71849740	71851810	789624	3	114,62,7710,	0,2019,3633,
#Partially deleted in new
chr16	71845995	71917094	chr16:71845995-71917094	0	+	71915640	71917094	789624	5	109,62,103,181,48,	0,2014,69630,70466,71051,
#Partially deleted in new
chr16	71846047	71885268	chr16:71846047-71885268	0	+	71846047	71846047	8553170	4	57,62,287,22,	0,1962,37069,39199,
#Partially deleted in new
chr16	71846068	71848418	chr16:71846068-71848418	0	+	71846068	71846068	8553170	2	36,409,	0,1941,
#Partially deleted in new
chr16	71859679	71884190	chr16:71859679-71884190	3	-	71860017	71879946	789624	7	993,167,105,146,117,63,283,	0,2096,4458,5223,20227,23531,24228,
#Partially deleted in new
chr16	71859679	71884190	chr16:71859679-71884190	1	-	71860017	71879946	789624	8	993,167,105,146,126,117,63,283,	0,2096,4458,5223,8232,20227,23531,24228,
#Partially deleted in new
chr16	71859679	71884172	chr16:71859679-71884172	0	-	71864219	71879946	789624	8	993,167,105,126,117,118,63,265,	0,2096,4458,8232,20227,21637,23531,24228,
#Partially deleted in new
chr16	71859679	71884190	chr16:71859679-71884190	1	-	71860669	71879946	789624	7	993,105,146,126,117,63,283,	0,4458,5223,8232,20227,23531,24228,
#Deleted in new
chr16	71859679	71860676	chr16:71859679-71860676	3	+	71859679	71859679	8553170	1	997,	0,
#Partially deleted in new
chr16	71859684	71883509	chr16:71859684-71883509	1	-	71860017	71879946	789624	6	988,167,105,146,117,299,	0,2091,4453,5218,20222,23526,
#Partially deleted in new
chr16	71859684	71880476	chr16:71859684-71880476	0	-	71865044	71879946	789624	7	988,167,105,146,145,117,54,	0,2091,4453,5218,8208,20222,20738,
#Partially deleted in new
chr16	71859775	71884204	chr16:71859775-71884204	1	-	71860669	71879946	789624	7	897,98,150,126,117,63,297,	0,4362,5123,8136,20131,23435,24132,
#Partially deleted in new
chr16	71859806	71883541	chr16:71859806-71883541	1	-	71860017	71879946	789624	7	866,167,105,146,126,117,331,	0,1969,4331,5096,8105,20100,23404,
#Partially deleted in new
chr16	71859986	71883275	chr16:71859986-71883275	0	-	71865044	71879946	789624	8	686,167,105,146,145,117,118,65,	0,1789,4151,4916,7906,19920,21330,23224,
#Partially deleted in new
chr16	71860046	71884158	chr16:71860046-71884158	0	-	71860046	71879946	789624	9	626,167,105,146,126,117,118,63,251,	0,1729,4091,4856,7865,19860,21270,23164,23861,
#Partially deleted in new
chr16	71860300	71883487	chr16:71860300-71883487	0	-	71864226	71879946	789624	6	372,105,145,117,63,65,	0,3837,7592,19606,22910,23122,
#Partially deleted in new
chr16	71860378	71880065	chr16:71860378-71880065	0	-	71860378	71879946	789624	5	294,167,105,146,159,	0,1397,3759,4524,19528,
#Partially deleted in new
chr16	71860492	71884161	chr16:71860492-71884161	0	-	71860492	71879946	789624	7	180,167,105,146,117,63,254,	0,1283,3645,4410,19414,22718,23415,
#Partially deleted in new
chr16	71860597	71884158	chr16:71860597-71884158	0	-	71865044	71879946	789624	9	75,167,105,146,145,117,118,63,251,	0,1178,3540,4305,7295,19309,20719,22613,23310,
#Partially deleted in new
chr16	71861778	71884641	chr16:71861778-71884641	0	-	71865044	71879946	789624	8	164,105,146,145,117,118,63,48,	0,2359,3124,6114,18128,19538,21432,22815,
#Partially deleted in new
chr16	71864138	71884125	chr16:71864138-71884125	0	-	71864138	71864138	8553170	5	104,145,117,63,218,	0,3754,15768,19072,19769,
#Partially deleted in new
chr16	71864753	71884153	chr16:71864753-71884153	0	-	71864753	71864753	8553170	5	295,145,117,63,246,	0,3139,15153,18457,19154,
#Partially deleted in new
chr16	71864898	71883585	chr16:71864898-71883585	0	-	71864898	71879946	789624	5	150,126,117,63,163,	0,3013,15008,18312,18524,
#Partially deleted in new
chr16	71864898	71884809	chr16:71864898-71884809	0	-	71864898	71879946	789624	5	150,126,117,63,216,	0,3013,15008,18312,19695,
#Partially deleted in new
chr16	71879876	71884137	chr16:71879876-71884137	0	-	71879876	71879876	8553170	3	147,63,230,	0,3334,4031,
#Partially deleted in new
chr16	71880007	71895336	chr16:71880007-71895336	0	-	71880007	71880007	8553170	3	16,63,448,	0,3203,14881,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	71885232	71916552	chr16:71885232-71916552	0	+	71915640	71916552	789624	4	144,138,103,91,	0,9488,30393,31229,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	71893933	71927973	chr16:71893933-71927973	1	+	71915640	71927813	789624	11	548,138,103,181,88,84,111,207,93,49,360,	0,787,21692,22528,23113,26805,27409,28540,29354,30835,33680,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	71894718	71930639	chr16:71894718-71930639	1	+	71894834	71927813	789624	10	140,103,181,88,84,111,207,93,49,3026,	0,20907,21743,22328,26020,26624,27755,28569,30050,32895,
#Partially deleted in new
chr16	71895248	71931199	chr16:71895248-71931199	1	+	71915640	71927813	789624	10	341,103,181,88,84,111,207,93,49,3586,	0,20377,21213,21798,25490,26094,27225,28039,29520,32365,
#Partially deleted in new
chr16	71895492	71930639	chr16:71895492-71930639	1	+	71921345	71927813	789624	6	97,111,207,93,49,3026,	0,25850,26981,27795,29276,32121,
#Partially deleted in new
chr16	71895493	71922680	chr16:71895493-71922680	0	+	71915640	71922680	789624	7	96,127,181,88,84,111,207,	0,20108,20968,21553,25245,25849,26980,
#Partially deleted in new
chr16	71895507	71920817	chr16:71895507-71920817	0	+	71915640	71920817	789624	5	82,103,181,88,67,	0,20118,20954,21539,25243,
#Partially deleted in new
chr16	71895509	71920898	chr16:71895509-71920898	0	+	71895509	71895509	8553170	5	80,103,181,88,160,	0,20116,20952,21537,25229,
#Partially deleted in new
chr16	71895530	71928339	chr16:71895530-71928339	0	+	71895530	71895530	8553170	6	59,111,207,93,49,726,	0,25812,26943,27757,29238,32083,
#Partially deleted in new
chr16	71895542	71929010	chr16:71895542-71929010	1	+	71915640	71927799	789624	10	47,103,181,88,84,111,207,93,45,1397,	0,20083,20919,21504,25196,25800,26931,27745,29230,32071,
#Partially deleted in new
chr16	71895547	71928152	chr16:71895547-71928152	1	+	71921345	71927813	789624	7	42,84,111,207,93,49,539,	0,25191,25795,26926,27740,29221,32066,
#Partially deleted in new
chr16	71895552	71929008	chr16:71895552-71929008	1	+	71915640	71927813	789624	9	37,103,181,88,84,111,207,49,1395,	0,20073,20909,21494,25186,25790,26921,29216,32061,
#Partially deleted in new
chr16	71895552	71922540	chr16:71895552-71922540	0	+	71915640	71922540	789624	7	43,100,181,88,84,111,67,	0,20076,20909,21494,25186,25790,26921,
#Partially deleted in new
chr16	71895588	71921400	chr16:71895588-71921400	0	+	71915640	71921400	789624	6	28,103,181,88,84,58,	0,20037,20873,21458,25150,25754,
#Partially deleted in new
chr16	71915625	71929002	chr16:71915625-71929002	0	+	71915640	71922511	789624	5	103,207,93,49,1389,	0,6848,7662,9143,11988,
#Partially deleted in new
chr16	71915640	71922511	chr16:71915640-71922511	1	+	71915640	71922511	789624	2	88,38,	0,6833,
#Partially deleted in new
chr16	71916524	71921762	chr16:71916524-71921762	0	+	71916524	71916524	8553170	4	118,88,84,420,	0,522,4214,4818,
#Partially deleted in new
chr16	71916559	71928974	chr16:71916559-71928974	0	+	71916559	71927813	789624	7	83,88,84,111,207,97,1361,	0,487,4179,4783,5914,6728,11054,
#Partially deleted in new
chr16	71920759	71923509	chr16:71920759-71923509	0	+	71920759	71920759	8553170	4	63,111,207,222,	0,583,1714,2528,
#Partially deleted in new
chr16	71921103	71922753	chr16:71921103-71922753	0	+	71921103	71921103	8553170	2	350,280,	0,1370,
#Partially deleted in new
chr16	71921423	71922934	chr16:71921423-71922934	0	+	71921423	71921423	8553170	2	30,461,	0,1050,
#Partially deleted in new
chr16	71922626	71928049	chr16:71922626-71928049	0	+	71922626	71924201	789624	5	54,93,191,49,436,	0,661,1464,2142,4987,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	71924407	71927838	chr16:71924407-71927838	0	+	71924407	71924407	8553170	2	410,225,	0,3206,
#Partially deleted in new
chr16	71929537	71999978	chr16:71929537-71999978	3	-	71929537	71999978	789624	30	141,132,102,211,161,128,465,141,100,235,193,181,200,197,147,179,102,231,194,232,129,127,128,177,132,249,50,117,123,295,	0,514,3882,4377,5820,7754,13022,14492,17954,20245,20580,22026,23356,24567,33667,37599,38368,40337,43786,47698,48717,50248,50469,52521,54498,56683,60742,63678,68734,70146,
#Deleted in new
chr16	71991150	71991305	chr16:71991150-71991305	7	-	71991150	71991150	16724991	1	155,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	72004238	72004803	chr16:72004238-72004803	7	-	72004238	72004238	16724991	2	319,84,	0,481,
#Partially deleted in new
chr16	72005036	72006543	chr16:72005036-72006543	7	-	72005036	72005036	16724991	1	1507,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	72008587	72027664	chr16:72008587-72027664	1	+	72008764	72024199	789624	9	198,213,200,83,188,114,154,154,3520,	0,3462,5885,8436,12536,13774,14577,14892,15557,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	72008743	72025416	chr16:72008743-72025416	3	+	72008764	72024199	0	9	42,213,200,83,188,114,154,160,1272,	0,3306,5729,8280,12380,13618,14421,14730,15401,
#Partially deleted in new
chr16	72008768	72024238	chr16:72008768-72024238	0	+	72008768	72024212	789624	5	17,213,200,83,94,	0,3281,5704,8255,15376,
#Partially deleted in new
chr16	72008777	72017079	chr16:72008777-72017079	0	+	72008777	72013592	789624	6	8,213,187,200,175,56,	0,3272,4806,5695,6906,8246,
#Partially deleted in new
chr16	72008800	72017106	chr16:72008800-72017106	0	+	72012112	72017106	789624	4	347,213,200,83,	0,3249,5672,8223,
#Partially deleted in new
chr16	72012232	72023278	chr16:72012232-72023278	0	+	72012232	72012232	8553170	4	30,200,83,114,	0,2240,4791,10932,
#Partially deleted in new
chr16	72014450	72021192	chr16:72014450-72021192	0	+	72014450	72014450	8553170	4	222,175,83,69,	0,1233,2573,6673,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	72015622	72024512	chr16:72015622-72024512	0	+	72015622	72015622	8553170	4	1484,159,154,368,	0,7542,7857,8522,
#Partially deleted in new
chr16	72044288	72093557	chr16:72044288-72093557	0	-	72044288	72090749	789624	4	69,152,169,191,	0,44698,46329,49078,
#Partially deleted in new
chr16	72054591	72061055	chr16:72054591-72061055	1	+	72054652	72060890	0	5	66,83,102,75,944,	0,1569,3662,4522,5520,
#Partially deleted in new
chr16	72054594	72061054	chr16:72054594-72061054	3	+	72054652	72060890	0	7	63,83,102,75,102,75,943,	0,1566,1935,2797,3659,4519,5517,
#Partially deleted in new
chr16	72054608	72060890	chr16:72054608-72060890	1	+	72056225	72060890	789624	4	49,83,75,753,	0,1552,3645,5529,
#Partially deleted in new
chr16	72054608	72061054	chr16:72054608-72061054	1	+	72054652	72060890	0	5	49,83,102,75,943,	0,1552,1921,4505,5503,
#Partially deleted in new
chr16	72054622	72058509	chr16:72054622-72058509	0	+	72054622	72054622	8553170	5	35,83,102,75,256,	0,1538,1907,2769,3631,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	72054622	72057346	chr16:72054622-72057346	0	+	72054622	72054622	8553170	3	35,83,817,	0,1538,1907,
#Partially deleted in new
chr16	72054622	72059461	chr16:72054622-72059461	1	+	72054652	72059199	789624	4	35,83,102,348,	0,1538,3631,4491,
#Partially deleted in new
chr16	72054625	72061016	chr16:72054625-72061016	1	+	72054652	72060890	789624	8	32,83,102,75,102,108,75,905,	0,1535,1904,2766,3628,3939,4488,5486,
#Partially deleted in new
chr16	72054625	72061055	chr16:72054625-72061055	1	+	72054652	72060676	789624	5	32,83,102,75,393,	0,1535,3628,4488,6037,
#Partially deleted in new
chr16	72054625	72060634	chr16:72054625-72060634	0	+	72054652	72060634	789624	5	32,83,102,75,403,	0,1535,3628,4488,5606,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	72054625	72061054	chr16:72054625-72061054	0	+	72054625	72054625	8553170	3	2006,75,943,	0,4488,5486,
#Partially deleted in new
chr16	72054625	72061054	chr16:72054625-72061054	1	+	72056225	72060890	789624	4	32,83,76,916,	0,1535,1904,5513,
#Partially deleted in new
chr16	72054628	72061009	chr16:72054628-72061009	1	+	72054652	72060890	789624	5	29,83,102,75,898,	0,1532,1901,2763,5483,
#Partially deleted in new
chr16	72054637	72059188	chr16:72054637-72059188	0	+	72054652	72059188	789624	4	20,83,102,75,	0,1523,3616,4476,
#Partially deleted in new
chr16	72056160	72058028	chr16:72056160-72058028	0	+	72056160	72056160	8553170	3	83,102,637,	0,369,1231,
#Partially deleted in new
chr16	72056160	72060928	chr16:72056160-72060928	0	+	72056160	72060890	789624	6	83,102,75,102,72,817,	0,369,1231,2093,2956,3951,
#Partially deleted in new
chr16	72056160	72061026	chr16:72056160-72061026	0	+	72056160	72060890	789624	6	83,102,75,102,75,795,	0,369,1231,2093,2953,4071,
#Partially deleted in new
chr16	72056160	72059818	chr16:72056160-72059818	0	+	72056160	72059199	789624	5	83,102,75,102,705,	0,369,1231,2093,2953,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	72063147	72077246	chr16:72063147-72077246	0	+	72063255	72064886	8553170	6	113,238,86,102,75,944,	0,1609,10744,11136,11997,13155,
#Partially deleted in new
chr16	72063223	72077246	chr16:72063223-72077246	3	+	72063255	72077081	789624	5	37,86,102,75,944,	0,10668,11060,11921,13079,
#Partially deleted in new
chr16	72063225	72074751	chr16:72063225-72074751	0	+	72063225	72063225	8553170	3	35,86,468,	0,10666,11058,
#Partially deleted in new
chr16	72063228	72077245	chr16:72063228-72077245	1	+	72073959	72077081	789624	4	32,86,76,916,	0,10663,11055,13101,
#Partially deleted in new
chr16	72063228	72077246	chr16:72063228-72077246	1	+	72063255	72076993	789624	6	32,86,102,75,48,291,	0,10663,11055,11916,13074,13727,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	72084852	72093651	chr16:72084852-72093651	1	-	72086636	72090749	0	4	1950,152,169,285,	0,4134,5765,8514,
#Partially deleted in new
chr16	72084856	72087443	chr16:72084856-72087443	3	+	72084856	72084856	8553170	2	222,147,	0,2440,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	72084858	72093869	chr16:72084858-72093869	3	-	72086636	72090749	0	4	1944,152,169,225,	0,4128,5759,8786,
#Partially deleted in new
chr16	72086396	72094431	chr16:72086396-72094431	1	-	72086636	72090749	0	4	406,152,169,238,	0,2590,4221,7797,
#Partially deleted in new
chr16	72086714	72093552	chr16:72086714-72093552	0	-	72090135	72090749	789624	5	88,152,89,169,186,	0,2272,3374,3903,6652,
#Partially deleted in new
chr16	72088986	72093869	chr16:72088986-72093869	0	-	72088986	72090749	789624	3	152,169,225,	0,1631,4658,
#Partially deleted in new
chr16	72093561	72112912	chr16:72093561-72112912	3	+	72096157	72112497	789624	27	490,342,188,105,148,119,77,156,162,108,113,138,187,186,141,111,117,108,113,209,155,156,135,126,96,122,500,	0,2577,3260,4115,5083,5365,5642,6170,6874,7524,7938,9512,10040,10384,10924,11465,11670,11955,12443,13778,14083,14665,14911,15238,15853,17394,18851,
#Deleted in new
chr16	72093612	72096912	chr16:72093612-72096912	0	+	72096157	72096912	789624	3	277,342,91,	0,2526,3209,
#Partially deleted in new
chr16	72093846	72112903	chr16:72093846-72112903	0	+	72096157	72105622	789624	12	205,342,108,113,209,155,156,135,126,96,122,491,	0,2292,11670,12158,13493,13798,14380,14626,14953,15568,17109,18566,
#Deleted in new
chr16	72093923	72096867	chr16:72093923-72096867	0	+	72096157	72096867	789624	4	128,58,342,46,	0,473,2215,2898,
#Partially deleted in new
chr16	72096926	72099826	chr16:72096926-72099826	0	+	72096926	72096926	8553170	5	83,105,148,354,95,	0,750,1718,2000,2805,
#Partially deleted in new
chr16	72097159	72099888	chr16:72097159-72099888	0	+	72097159	72097159	8553170	5	622,148,119,77,157,	0,1485,1767,2044,2572,
#Deleted in new
chr16	72101081	72103921	chr16:72101081-72103921	0	+	72101081	72101081	8553170	4	112,113,138,320,	0,418,1992,2520,
#Deleted in new
chr16	72103100	72104554	chr16:72103100-72104554	0	+	72103100	72103100	8553170	3	111,187,609,	0,501,845,
#Partially deleted in new
chr16	72104485	72112908	chr16:72104485-72112908	0	+	72104485	72112795	789624	4	141,111,60,188,	0,541,746,8235,
#Deleted in new
chr16	72108295	72112639	chr16:72108295-72112639	0	+	72108295	72112497	789624	6	87,135,126,96,35,227,	0,177,504,1119,2747,4117,
#Deleted in new
chr16	72108296	72108878	chr16:72108296-72108878	0	+	72108296	72108296	8553170	2	311,79,	0,503,
#Deleted in new
chr16	72108353	72112650	chr16:72108353-72112650	0	+	72108353	72108353	8553170	4	572,96,122,238,	0,1061,2602,4059,
#Deleted in new
chr16	72108371	72112909	chr16:72108371-72112909	0	+	72108371	72112497	789624	7	11,135,126,96,122,117,285,	0,101,428,1043,2584,4041,4253,
#Deleted in new
chr16	72108629	72109756	chr16:72108629-72109756	0	+	72108629	72108629	8553170	2	296,342,	0,785,
#Partially deleted in new
chr16	72112156	72124853	chr16:72112156-72124853	1	-	72112760	72124853	789624	4	689,75,104,87,	0,10757,11389,12610,
#Partially deleted in new
chr16	72119096	72172255	chr16:72119096-72172255	3	-	72119337	72171208	789624	21	258,239,75,104,168,168,165,138,168,145,190,244,158,127,111,171,222,249,153,72,202,	0,754,3817,4449,5670,6141,6871,9560,9969,11116,11436,13651,17351,17596,20192,21315,31511,35114,45667,52100,52957,
#Partially deleted in new
chr16	72119096	72172152	chr16:72119096-72172152	1	-	72119803	72171208	789624	20	993,75,104,168,168,165,138,168,145,190,259,158,127,111,171,222,249,153,72,99,	0,3817,4449,5670,6141,6871,9560,9969,11116,11436,13636,17351,17596,20192,21315,31511,35114,45667,52100,52957,
#Partially deleted in new
chr16	72119099	72171271	chr16:72119099-72171271	1	-	72119337	72150808	789624	21	255,299,75,104,168,168,165,138,168,145,190,244,158,127,111,171,222,249,116,153,75,	0,751,3814,4446,5667,6138,6868,9557,9966,11113,11433,13648,17348,17593,20189,21312,31508,35111,45271,45664,52097,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr16	72119100	72172450	chr16:72119100-72172450	0	-	72154434	72171208	789624	22	254,299,75,104,168,168,165,138,168,145,190,244,158,127,111,171,222,249,116,153,72,174,	0,750,3813,4445,5666,6137,6867,9556,9965,11112,11432,13647,17347,17592,20188,21311,31507,35110,45270,45663,52096,53176,
#Partially deleted in new
chr16	72124919	72150652	chr16:72124919-72150652	0	-	72128557	72150652	789624	14	15,168,165,193,138,168,145,190,244,158,127,111,171,45,	0,318,1048,3457,3737,4146,5293,5613,7828,11528,11773,14369,15492,25688,
#Partially deleted in new
chr16	72150773	72171435	chr16:72150773-72171435	0	-	72150773	72171208	789624	5	56,249,153,72,29,	0,3437,13990,20423,20633,
#Partially deleted in new
chr16	72154293	72171897	chr16:72154293-72171897	0	-	72154293	72171208	789624	4	166,153,72,165,	0,10470,16903,17439,
#Partially deleted in new
chr16	72154306	72172103	chr16:72154306-72172103	0	-	72154306	72154306	8553170	5	153,116,153,72,50,	0,10064,10457,16890,17747,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	72154420	72172470	chr16:72154420-72172470	0	-	72154420	72171208	789624	4	39,153,72,194,	0,10343,16776,17856,
#Partially deleted in new
chr16	72164785	72176878	chr16:72164785-72176878	0	-	72164785	72171208	789624	4	131,72,148,56,	0,6411,9137,12037,
#Deleted in new
chr16	72224564	72225144	chr16:72224564-72225144	3	-	72224564	72224564	8553170	2	295,96,	0,484,
#Partially deleted in new
chr16	72278267	72278568	chr16:72278267-72278568	7	+	72278267	72278267	16724991	1	301,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	72376703	72376760	chr16:72376703-72376760	3	+	72376703	72376703	8553170	1	57,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	72425484	72665004	chr16:72425484-72665004	1	-	72425484	72425484	8553170	3	1973,108,113,	0,54198,239407,
#Deleted in new
chr16	72425947	72430266	chr16:72425947-72430266	1	+	72425947	72425947	8553170	1	4319,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	72429352	72533892	chr16:72429352-72533892	3	+	72429352	72429352	8553170	2	711,934,	0,103606,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	72522137	72665009	chr16:72522137-72665009	3	-	72522137	72522137	8553170	5	486,84,62,81,118,	0,1194,33127,48297,142754,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	72570480	72664949	chr16:72570480-72664949	1	-	72570480	72570480	8553170	4	35,52,215,58,	0,46702,46858,94411,
#Partially deleted in new
chr16	72665169	72791624	chr16:72665169-72791624	3	+	72665169	72665169	8553170	5	164,62,62,92,4462,	0,80235,81951,116558,121993,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	72673502	72673564	chr16:72673502-72673564	3	+	72673502	72673502	8553170	1	62,	0,
#Deleted in new
chr16	72728615	72729894	chr16:72728615-72729894	7	+	72728615	72728615	16724991	1	1279,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	72772672	72773272	chr16:72772672-72773272	3	+	72772672	72772672	8553170	1	600,	0,
#Partially deleted in new
chr16	72782884	73048375	chr16:72782884-73048375	1	-	72787163	72960145	0	10	5964,5460,103,201,134,81,232,497,2768,624,	0,10370,17142,28692,29020,46894,106846,167584,174542,264867,
#Partially deleted in new
chr16	72782884	73059698	chr16:72782884-73059698	1	-	72787163	72950942	0	9	5964,5460,103,201,134,81,232,497,1169,	0,10370,17142,28692,29020,46894,106846,167584,275645,
#Partially deleted in new
chr16	72782884	73891871	chr16:72782884-73891871	3	-	72787163	72960145	0	18	5964,5460,103,201,134,81,232,497,2768,483,364,127,80,90,97,256,61,221,	0,10370,17142,28692,29020,46894,106846,167584,174542,275645,310350,348083,360867,474162,535355,673118,897295,1108766,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	72805997	72809872	chr16:72805997-72809872	3	+	72805997	72805997	8553170	2	35,526,	0,3349,
#Deleted in new
chr16	72806982	72809639	chr16:72806982-72809639	1	+	72806982	72806982	8553170	2	210,293,	0,2364,
#Deleted in new
chr16	72807044	72808118	chr16:72807044-72808118	1	+	72807044	72807044	8553170	1	1074,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	72821932	72821992	chr16:72821932-72821992	3	-	72821932	72821932	8553170	1	60,	0,
#Partially deleted in new
chr16	72829508	72889834	chr16:72829508-72889834	0	-	72829508	72829508	8553170	2	351,104,	0,60222,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	72973373	72973832	chr16:72973373-72973832	3	-	72973373	72973373	8553170	1	459,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	73005600	73006141	chr16:73005600-73006141	3	-	73005600	73005600	8553170	1	541,	0,
#Partially deleted in new
chr16	73014318	73014476	chr16:73014318-73014476	3	-	73014318	73014318	8553170	1	158,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	73015046	73016016	chr16:73015046-73016016	3	-	73015046	73015046	8553170	1	970,	0,
#Deleted in new
chr16	73058880	73059222	chr16:73058880-73059222	0	-	73058880	73058880	8553170	2	132,108,	0,234,
#Deleted in new
chr16	73060244	73062316	chr16:73060244-73062316	3	+	73060244	73060244	8553170	1	2072,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	73081243	73094546	chr16:73081243-73094546	0	-	73081243	73081243	8553170	4	408,132,364,38,	0,2053,11991,13265,
#Deleted in new
chr16	73092348	73093774	chr16:73092348-73093774	1	+	73092348	73092348	789624	3	637,131,311,	0,732,1115,
#Partially deleted in new
chr16	73092689	73099337	chr16:73092689-73099337	3	+	73092689	73092689	8553170	3	296,131,602,	0,391,6046,
#Deleted in new
chr16	73092689	73094546	chr16:73092689-73094546	0	+	73092689	73092689	8553170	2	296,1466,	0,391,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	73123295	73137580	chr16:73123295-73137580	3	+	73123295	73123295	8553170	4	316,104,93,310,	0,1927,11224,13975,
#Partially deleted in new
chr16	73126636	73144447	chr16:73126636-73144447	0	-	73126636	73126636	8553170	4	963,127,80,138,	0,4331,17115,17673,
#Deleted in new
chr16	73232054	73233108	chr16:73232054-73233108	1	+	73232054	73232054	8553170	1	1054,	0,
#Deleted in new
chr16	73232761	73233970	chr16:73232761-73233970	3	+	73232761	73232761	8553170	2	107,87,	0,1122,
#Deleted in new
chr16	73293865	73294296	chr16:73293865-73294296	3	-	73293865	73293865	8553170	1	431,	0,
#Partially deleted in new
chr16	73386804	73421393	chr16:73386804-73421393	1	+	73386804	73386804	789624	3	450,138,737,	0,33288,33852,
#Partially deleted in new
chr16	73386823	73504954	chr16:73386823-73504954	3	+	73386823	73386823	8553170	4	431,92,143,714,	0,33833,99930,117417,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	73387052	73402480	chr16:73387052-73402480	1	+	73387052	73387052	8553170	2	202,2342,	0,13086,
#Partially deleted in new
chr16	73387052	73421210	chr16:73387052-73421210	0	+	73387052	73387052	8553170	2	202,554,	0,33604,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	73387062	73389241	chr16:73387062-73389241	0	+	73387062	73387062	8553170	2	192,415,	0,1764,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	73483316	73487744	chr16:73483316-73487744	0	+	73483316	73483316	8553170	3	117,143,317,	0,3437,4111,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	73499254	73504743	chr16:73499254-73504743	1	+	73499254	73499254	8553170	2	977,503,	0,4986,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	73543940	73558522	chr16:73543940-73558522	3	+	73543940	73543940	8553170	4	68,46,163,255,	0,10331,10708,14327,
#Partially deleted in new
chr16	73608655	73891752	chr16:73608655-73891752	0	-	73608655	73608655	8553170	3	1440,61,102,	0,71524,282995,
#Partially deleted in new
chr16	73679503	73891750	chr16:73679503-73891750	0	-	73679503	73679503	8553170	2	737,100,	0,212147,
#Partially deleted in new
chr16	73794078	73809733	chr16:73794078-73809733	3	+	73794078	73794078	8553170	4	261,163,34,494,	0,2326,14393,15161,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	73812620	73816053	chr16:73812620-73816053	3	+	73812620	73812620	8553170	4	20,93,101,177,	0,1144,2967,3256,
#Deleted in new
chr16	73940638	73941524	chr16:73940638-73941524	7	-	73940638	73940638	16724991	1	886,	0,
#Deleted in new
chr16	73941411	73941781	chr16:73941411-73941781	4	-	73941411	73941411	16724991	1	370,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	73943077	74206165	chr16:73943077-74206165	1	-	73943077	73943077	8553170	4	845,109,42,261,	0,5505,190563,262827,
#Partially deleted in new
chr16	73948810	73994715	chr16:73948810-73994715	0	-	73948810	73948810	8553170	2	1061,108,	0,45797,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	73948810	74181935	chr16:73948810-74181935	1	-	73948810	73948810	8553170	5	1061,137,183,91,208,	0,3682,165493,166062,232917,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	73996800	74019971	chr16:73996800-74019971	3	-	73996800	73996800	8553170	5	69,140,174,295,87,	0,2025,9803,19526,23084,
#Partially deleted in new
chr16	74016429	74296533	chr16:74016429-74296533	0	-	74016429	74016429	8553170	3	192,261,111,	0,189475,279993,
#Deleted in new
chr16	74053364	74053965	chr16:74053364-74053965	3	+	74053364	74053364	8553170	1	601,	0,
#Partially deleted in new
chr16	74054150	74296751	chr16:74054150-74296751	0	-	74054150	74054150	8553170	3	455,261,129,	0,151754,242472,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	74103085	74296756	chr16:74103085-74296756	1	-	74103085	74103085	8553170	8	267,261,37,53,51,64,139,134,	0,102819,112880,127748,172108,177350,178315,193537,
#Deleted in new
chr16	74150519	74151299	chr16:74150519-74151299	3	+	74150519	74150519	8553170	1	780,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	74161278	74296498	chr16:74161278-74296498	1	-	74161278	74161278	8553170	7	1269,261,169,98,51,45,84,	0,44626,54555,110442,113915,134006,135136,
#Partially deleted in new
chr16	74206094	74296762	chr16:74206094-74296762	0	-	74206094	74206094	8553170	2	71,348,	0,90320,
#Deleted in new
chr16	74220928	74221427	chr16:74220928-74221427	7	+	74220928	74220928	16724991	1	499,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	74282414	74287519	chr16:74282414-74287519	3	+	74282414	74282414	8553170	2	24,451,	0,4654,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	74289592	74291052	chr16:74289592-74291052	3	-	74289592	74289592	8553170	1	1460,	0,
#Partially deleted in new
chr16	74296774	74306288	chr16:74296774-74306288	3	+	74296914	74305733	0	7	214,92,93,98,81,92,1000,	0,3340,4277,4780,5437,7528,8514,
#Partially deleted in new
chr16	74296814	74300477	chr16:74296814-74300477	0	+	74296814	74296814	8553170	2	174,363,	0,3300,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	74296819	74305888	chr16:74296819-74305888	0	+	74296914	74299633	789624	8	169,170,92,93,98,81,92,600,	0,2756,3295,4232,4735,5392,7483,8469,
#Partially deleted in new
chr16	74296820	74305513	chr16:74296820-74305513	1	+	74296914	74305512	789624	7	168,92,93,98,81,92,68,	0,3294,4231,4734,5391,7482,8625,
#Partially deleted in new
chr16	74296828	74304709	chr16:74296828-74304709	1	+	74296914	74304398	789624	6	160,92,93,98,81,407,	0,3286,4223,4726,5383,7474,
#Deleted in new
chr16	74303988	74305606	chr16:74303988-74305606	0	+	74303988	74303988	8553170	2	406,318,	0,1300,
#Deleted in new
chr16	74305126	74306331	chr16:74305126-74306331	1	-	74305126	74305126	8553170	2	445,77,	0,1128,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	74305201	74310307	chr16:74305201-74310307	1	-	74305201	74305201	8553170	2	370,309,	0,4797,
#Partially deleted in new
chr16	74305255	74332613	chr16:74305255-74332613	3	-	74305255	74305255	8553170	3	325,167,47,	0,999,27311,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	74305738	74307770	chr16:74305738-74307770	1	-	74305738	74305738	8553170	1	2032,	0,
#Partially deleted in new
chr16	74310099	74335346	chr16:74310099-74335346	1	-	74310099	74310099	8553170	2	35,455,	0,24792,
#Partially deleted in new
chr16	74312608	74313390	chr16:74312608-74313390	7	-	74312608	74312608	16724991	2	111,362,	0,420,
#Partially deleted in new
chr16	74313336	74315634	chr16:74313336-74315634	3	+	74313336	74313336	8553170	2	24,489,	0,1809,
#Partially deleted in new
chr16	74332401	74368161	chr16:74332401-74368161	7	-	74332401	74332401	16724991	14	255,95,113,149,134,156,125,193,149,122,339,134,259,97,	0,2490,4192,5073,6043,6337,9728,12377,16465,18215,19638,21375,28231,35663,
#Partially deleted in new
chr16	74332566	74360859	chr16:74332566-74360859	5	-	74332566	74332566	16724991	15	90,95,113,149,134,156,125,193,149,118,122,164,82,134,227,	0,2325,4027,4908,5878,6172,9563,12212,16300,17175,18050,19473,19730,21210,28066,
#Partially deleted in new
chr16	74334891	74344818	chr16:74334891-74344818	4	-	74334891	74334891	16724991	7	95,113,149,216,156,125,40,	0,1702,2583,3553,3847,7238,9887,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	74337943	74368240	chr16:74337943-74368240	5	-	74337943	74337943	16724991	10	951,125,193,149,122,164,82,134,259,176,	0,4186,6835,10923,12673,14096,14353,15833,22689,30121,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	74367034	74368148	chr16:74367034-74368148	4	-	74367034	74367034	16724991	2	650,84,	0,1030,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	74367461	74369826	chr16:74367461-74369826	3	+	74367461	74367461	8553170	1	2365,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	74377877	74392080	chr16:74377877-74392080	3	+	74377973	74392080	789624	7	162,183,100,196,61,36,690,	0,3638,7464,7676,11947,12117,13513,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	74381308	74381765	chr16:74381308-74381765	0	+	74381308	74381308	8553170	1	457,	0,
#Partially deleted in new
chr16	74393075	74393183	chr16:74393075-74393183	7	-	74393075	74393075	16724991	1	108,	0,
#Partially deleted in new
chr16	74408269	74421756	chr16:74408269-74421756	1	-	74409005	74421270	789624	13	774,92,97,130,107,93,108,124,96,240,92,230,138,	0,1280,2266,2635,3399,3884,4503,4767,5311,9789,12231,12877,13349,
#Partially deleted in new
chr16	74408269	74421953	chr16:74408269-74421953	1	-	74409005	74421270	789624	13	774,92,97,130,107,93,108,124,96,240,92,230,32,	0,1280,2266,2635,3399,3884,4503,4767,5311,9789,12231,12877,13652,
#Partially deleted in new
chr16	74408630	74421392	chr16:74408630-74421392	3	-	74409005	74421270	789624	13	413,92,27,97,130,107,93,108,122,98,240,92,246,	0,919,1221,1905,2274,3038,3523,4142,4406,4948,9428,11870,12516,
#Partially deleted in new
chr16	74408632	74421404	chr16:74408632-74421404	1	-	74411739	74421270	789624	13	411,92,97,130,107,18,74,108,124,96,240,92,258,	0,917,1903,2272,3036,3521,3540,4140,4404,4948,9426,11868,12514,
#Deleted in new
chr16	74411352	74412799	chr16:74411352-74412799	0	-	74411352	74411352	8553170	3	423,93,27,	0,801,1420,
#Partially deleted in new
chr16	74411886	74421470	chr16:74411886-74421470	0	-	74411886	74411886	8553170	7	360,84,108,122,98,92,324,	0,491,886,1150,1692,8614,9260,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	74422119	74435254	chr16:74422119-74435254	3	+	74422119	74422119	8553170	3	323,166,85,	0,12323,13050,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	74422129	74434699	chr16:74422129-74434699	0	+	74422129	74422129	8553170	2	313,257,	0,12313,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr16	74447426	74607114	chr16:74447426-74607114	3	-	74452055	74607094	789624	27	4705,164,107,121,108,102,143,124,138,93,118,89,114,63,87,138,154,102,122,215,184,72,204,216,87,33,458,	0,5744,9222,10447,12255,14667,15061,15929,18249,20329,21519,22558,23746,24922,27119,29969,32814,35596,38369,43574,45530,47333,49014,56104,61412,84694,159230,
#Partially deleted in new
chr16	74451958	74607094	chr16:74451958-74607094	1	-	74453166	74607094	789624	26	1376,107,121,108,102,143,124,138,93,118,89,114,63,87,138,154,102,122,215,184,72,204,216,87,33,438,	0,4690,5915,7723,10135,10529,11397,13717,15797,16987,18026,19214,20390,22587,25437,28282,31064,33837,39042,40998,42801,44482,51572,56880,80162,154698,
#Partially deleted in new
chr16	74452026	74607112	chr16:74452026-74607112	1	-	74452055	74607094	789624	26	105,164,107,121,108,102,143,124,138,93,118,89,114,63,87,138,154,102,122,215,184,72,204,216,87,456,	0,1144,4622,5847,7655,10067,10461,11329,13649,15729,16919,17958,19146,20322,22519,25369,28214,30996,33769,38974,40930,42733,44414,51504,56812,154630,
#Partially deleted in new
chr16	74452789	74607105	chr16:74452789-74607105	0	-	74472589	74607094	789624	27	545,107,121,108,102,143,124,138,93,118,89,114,63,109,87,138,154,102,122,215,184,72,204,216,87,33,449,	0,3859,5084,6892,9304,9698,10566,12886,14966,16156,17195,18383,19559,19736,21756,24606,27451,30233,33006,38211,40167,41970,43651,50741,56049,79331,153867,
#Partially deleted in new
chr16	74452789	74607098	chr16:74452789-74607098	0	-	74477439	74607094	789624	21	545,107,121,108,102,143,124,138,93,118,89,114,63,87,138,34,16,216,87,33,442,	0,3859,5084,6892,9304,9698,10566,12886,14966,16156,17195,18383,19559,21756,24606,27451,43839,50741,56049,79331,153867,
#Partially deleted in new
chr16	74453188	74458294	chr16:74453188-74458294	0	-	74453188	74453188	8553170	3	146,107,421,	0,3460,4685,
#Deleted in new
chr16	74456540	74456611	chr16:74456540-74456611	3	+	74456540	74456540	8553170	1	71,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	74461488	74468405	chr16:74461488-74468405	0	-	74461488	74461488	8553170	4	707,992,138,650,	0,999,4187,6267,
#Deleted in new
chr16	74461783	74463439	chr16:74461783-74463439	0	-	74461783	74461783	8553170	3	412,143,84,	0,704,1572,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	74463887	74463988	chr16:74463887-74463988	3	-	74463887	74463887	8553170	1	101,	0,
#Partially deleted in new
chr16	74467758	74472492	chr16:74467758-74472492	0	-	74467758	74467758	8553170	5	90,118,89,114,144,	0,1187,2226,3414,4590,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	74468253	74472950	chr16:74468253-74472950	0	-	74468253	74468253	8553170	3	1820,114,602,	0,2919,4095,
#Partially deleted in new
chr16	74472589	74607144	chr16:74472589-74607144	1	-	74472589	74607094	789624	14	45,87,138,154,102,122,215,184,72,204,216,87,33,488,	0,1956,4806,7651,10433,13206,18411,20367,22170,23851,30941,36249,59531,134067,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	74474171	74477533	chr16:74474171-74477533	0	-	74474171	74474171	8553170	2	461,138,	0,3224,
#Partially deleted in new
chr16	74503735	74607097	chr16:74503735-74607097	0	-	74503735	74607094	789624	5	11,87,33,171,159,	0,5103,28385,102921,103203,
#Deleted in new
chr16	74552250	74552746	chr16:74552250-74552746	7	+	74552250	74552250	16724991	1	496,	0,
#Partially deleted in new
chr16	74612595	74613221	chr16:74612595-74613221	7	-	74612595	74612595	16724991	2	287,34,	0,592,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	74621393	74666881	chr16:74621393-74666881	3	-	74623927	74661449	789624	13	2678,212,215,177,151,232,115,92,195,71,203,520,96,	0,4949,7058,9387,11129,14952,16462,22968,23147,27738,30526,39538,45392,
#Partially deleted in new
chr16	74628507	74632733	chr16:74628507-74632733	0	-	74628507	74628507	8553170	3	159,177,211,	0,2273,4015,
#Partially deleted in new
chr16	74637875	74649243	chr16:74637875-74649243	0	-	74637875	74637875	8553170	4	95,92,195,112,	0,6486,6665,11256,
#Partially deleted in new
chr16	74643978	74644637	chr16:74643978-74644637	0	-	74643978	74643978	8553170	2	475,97,	0,562,
#Partially deleted in new
chr16	74660599	74666869	chr16:74660599-74666869	0	-	74660599	74660599	8553170	2	852,84,	0,6186,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	74664334	74666832	chr16:74664334-74666832	0	-	74664334	74664334	8553170	2	411,47,	0,2451,
#Deleted in new
chr16	74667505	74668706	chr16:74667505-74668706	7	+	74667505	74667505	16724991	1	1201,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	74671854	74700790	chr16:74671854-74700790	1	-	74672503	74695757	0	6	684,141,81,75,462,338,	0,3105,3469,20487,23443,28598,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	74671856	74678413	chr16:74671856-74678413	0	-	74671856	74671856	8553170	3	682,141,3059,	0,3103,3498,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	74671856	74677051	chr16:74671856-74677051	0	-	74671856	74671856	8553170	3	682,445,1439,	0,3103,3756,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	74671860	74700914	chr16:74671860-74700914	3	-	74672503	74695757	0	11	678,141,50,152,82,136,98,187,75,462,462,	0,3099,3494,3752,7038,10790,13625,19416,20481,23437,28592,
#Partially deleted in new
chr16	74672352	74678948	chr16:74672352-74678948	0	-	74672503	74678948	789624	4	186,141,81,50,	0,2607,2971,6546,
#Partially deleted in new
chr16	74675617	74691469	chr16:74675617-74691469	0	-	74676407	74691469	789624	6	147,125,82,136,98,193,	0,683,3281,7033,9868,15659,
#Partially deleted in new
chr16	74691364	74700960	chr16:74691364-74700960	0	-	74691364	74695757	789624	5	99,75,462,90,278,	0,977,3933,9088,9318,
#Partially deleted in new
chr16	74695511	74700809	chr16:74695511-74700809	0	-	74695511	74695697	789624	2	210,357,	0,4941,
#Partially deleted in new
chr16	74712954	74774825	chr16:74712954-74774825	3	-	74714189	74774755	789624	7	1315,253,173,107,143,93,340,	0,3392,6033,13270,14289,27068,61531,
#Partially deleted in new
chr16	74712954	74717106	chr16:74712954-74717106	0	-	74712954	74712954	8553170	2	1315,760,	0,3392,
#Partially deleted in new
chr16	74713597	74774831	chr16:74713597-74774831	0	-	74719052	74774755	789624	5	672,253,173,93,346,	0,2749,5390,26425,60888,
#Partially deleted in new
chr16	74718998	74741269	chr16:74718998-74741269	0	-	74718998	74741268	789624	5	162,107,143,93,73,	0,7226,8245,21024,22198,
#Deleted in new
chr16	74725955	74726247	chr16:74725955-74726247	0	-	74726192	74726247	789624	1	292,	0,
#Partially deleted in new
chr16	74842586	74843883	chr16:74842586-74843883	7	+	74842586	74842586	16724991	3	89,156,75,	0,543,1222,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr16	74871366	74985148	chr16:74871366-74985148	3	-	74874208	74985017	789624	26	3078,143,127,73,151,113,82,134,154,70,157,96,165,125,133,80,157,78,117,89,38,81,86,136,50,185,	0,14286,14903,16316,16802,18336,21117,22312,32580,37541,38134,38455,40831,44503,44760,46562,50580,52559,66783,71371,77152,78351,80091,85108,94406,113597,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	74874078	74886235	chr16:74874078-74886235	0	-	74874078	74874078	8553170	2	366,583,	0,11574,
#Partially deleted in new
chr16	74874394	74886469	chr16:74874394-74886469	0	-	74874394	74874394	8553170	3	50,143,200,	0,11258,11875,
#Partially deleted in new
chr16	74874425	74904020	chr16:74874425-74904020	0	-	74874425	74904020	789624	7	19,143,127,73,82,134,74,	0,11227,11844,13257,18058,19253,29521,
#Partially deleted in new
chr16	74888210	74893940	chr16:74888210-74893940	0	-	74888210	74888210	8553170	4	109,113,82,262,	0,1492,4273,5468,
#Partially deleted in new
chr16	74888243	74904346	chr16:74888243-74904346	0	-	74888243	74888243	8553170	5	76,113,82,134,400,	0,1459,4240,5435,15703,
#Partially deleted in new
chr16	74889659	74904157	chr16:74889659-74904157	0	-	74889659	74889659	8553170	4	156,82,134,211,	0,2824,4019,14287,
#Partially deleted in new
chr16	74889702	74912235	chr16:74889702-74912235	0	-	74889702	74912235	789624	9	113,82,134,57,154,70,157,96,38,	0,2781,3976,9995,14244,19205,19798,20119,22495,
#Partially deleted in new
chr16	74889722	74909606	chr16:74889722-74909606	0	-	74904062	74909606	789624	5	93,82,134,154,106,	0,2761,3956,14224,19778,
#Partially deleted in new
chr16	74893706	74909735	chr16:74893706-74909735	0	-	74893706	74893706	8553170	4	106,154,70,235,	0,10240,15201,15794,
#Partially deleted in new
chr16	74908732	74985083	chr16:74908732-74985083	1	-	74908903	74985017	789624	17	245,157,96,165,125,133,80,157,78,117,89,38,81,86,136,50,120,	0,768,1089,3465,7137,7394,9196,13214,15193,29417,34005,39786,40985,42725,47742,57040,76231,
#Partially deleted in new
chr16	74909524	74916037	chr16:74909524-74916037	0	-	74909524	74909524	8553170	4	133,96,165,168,	0,297,2673,6345,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	74912004	74984826	chr16:74912004-74984826	1	-	74912146	74965813	789624	14	358,125,133,80,157,78,117,89,38,81,86,136,50,224,	0,3865,4122,5924,9942,11921,26145,30733,36514,37713,39453,44470,53768,72598,
#Partially deleted in new
chr16	74912117	74916160	chr16:74912117-74916160	0	-	74912117	74912117	8553170	2	245,291,	0,3752,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	74915679	74921960	chr16:74915679-74921960	0	-	74915679	74915679	8553170	4	315,133,80,14,	0,447,2249,6267,
#Partially deleted in new
chr16	74923949	74965810	chr16:74923949-74965810	0	-	74923949	74923949	8553170	7	54,117,38,81,86,136,38,	0,14200,24569,25768,27508,32525,41823,
#Partially deleted in new
chr16	74938250	75000173	chr16:74938250-75000173	0	-	74938250	74938250	8553170	7	16,38,81,86,136,50,151,	0,10268,11467,13207,18224,27522,61772,
#Partially deleted in new
chr16	74942739	74979116	chr16:74942739-74979116	0	-	74942739	74965813	789624	7	87,38,81,86,136,50,105,	0,5779,6978,8718,13735,23033,36272,
#Partially deleted in new
chr16	74949851	74997173	chr16:74949851-74997173	0	-	74949851	74949851	8553170	5	96,86,136,50,202,	0,1606,6623,15921,47120,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	74956483	74985031	chr16:74956483-74985031	0	-	74959588	74985017	789624	4	127,243,50,68,	0,2866,9289,28480,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	74962819	74965822	chr16:74962819-74965822	0	-	74962819	74962819	8553170	2	428,50,	0,2953,
#Partially deleted in new
chr16	74999029	75110994	chr16:74999029-75110994	3	+	74999671	75106539	0	5	1066,96,106,90,3262,	0,94542,105754,107452,108703,
#Partially deleted in new
chr16	74999036	75108707	chr16:74999036-75108707	1	+	74999671	75106539	0	6	1059,96,153,106,90,975,	0,94535,96561,105747,107445,108696,
#Partially deleted in new
chr16	74999344	75105005	chr16:74999344-75105005	1	+	74999671	75104893	789624	3	751,96,222,	0,94227,105439,
#Partially deleted in new
chr16	74999344	75108028	chr16:74999344-75108028	1	+	74999671	75106539	0	5	751,96,106,90,191,	0,94227,105439,107137,108493,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	75000241	75107774	chr16:75000241-75107774	0	+	75000241	75000241	8553170	6	147,126,96,106,90,42,	0,46521,93330,104542,106240,107491,
#Partially deleted in new
chr16	75002296	75104889	chr16:75002296-75104889	0	+	75093615	75104889	789624	4	74,209,96,106,	0,82132,91275,102487,
#Partially deleted in new
chr16	75095143	75105336	chr16:75095143-75105336	0	+	75095143	75095143	8553170	2	18,553,	0,9640,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	75104059	75108039	chr16:75104059-75108039	0	+	75104059	75104059	8553170	1	3980,	0,
#Deleted in new
chr16	75104783	75108590	chr16:75104783-75108590	0	+	75104783	75107862	789624	2	106,858,	0,2949,
#Deleted in new
chr16	75104797	75108004	chr16:75104797-75108004	0	+	75104797	75104797	8553170	2	1774,272,	0,2935,
#Deleted in new
chr16	75105382	75110713	chr16:75105382-75110713	0	+	75105382	75105382	8553170	1	5331,	0,
#Deleted in new
chr16	75108600	75110712	chr16:75108600-75110712	3	-	75108600	75108600	8553170	2	1281,385,	0,1727,
#Partially deleted in new
chr16	75111859	75116767	chr16:75111859-75116767	1	-	75112355	75116720	789624	11	662,112,91,128,129,269,160,142,142,113,119,	0,742,974,1675,1882,2106,2666,2967,3338,3688,4789,
#Partially deleted in new
chr16	75111895	75116771	chr16:75111895-75116771	3	-	75112355	75116720	789624	11	626,112,91,128,129,200,160,142,142,113,123,	0,706,938,1639,1846,2070,2630,2931,3302,3652,4753,
#Partially deleted in new
chr16	75111899	75116755	chr16:75111899-75116755	0	-	75116612	75116720	789624	11	622,112,91,119,129,269,160,142,142,113,144,	0,702,934,1635,1842,2066,2626,2927,3298,3648,4712,
#Deleted in new
chr16	75114503	75115592	chr16:75114503-75115592	0	-	75114503	75114503	8553170	3	182,513,45,	0,323,1044,
#Partially deleted in new
chr16	75148491	75170372	chr16:75148491-75170372	1	+	75152951	75170334	789624	4	152,58,127,1120,	0,4417,18278,20761,
#Partially deleted in new
chr16	75148493	75169402	chr16:75148493-75169402	0	+	75148493	75148493	8553170	5	150,58,75,127,150,	0,4415,8643,18276,20759,
#Partially deleted in new
chr16	75148493	75149012	chr16:75148493-75149012	0	+	75148493	75148493	8553170	2	150,112,	0,407,
#Partially deleted in new
chr16	75148493	75170470	chr16:75148493-75170470	1	+	75152951	75169324	789624	3	150,58,1218,	0,4415,20759,
#Partially deleted in new
chr16	75148509	75149008	chr16:75148509-75149008	0	+	75148509	75148509	8553170	2	153,108,	0,391,
#Partially deleted in new
chr16	75148526	75172000	chr16:75148526-75172000	1	+	75152951	75169324	789624	4	117,58,144,2748,	0,4382,18243,20726,
#Partially deleted in new
chr16	75148533	75170517	chr16:75148533-75170517	1	+	75166853	75170334	789624	3	110,127,1265,	0,18236,20719,
#Partially deleted in new
chr16	75148581	75172236	chr16:75148581-75172236	3	+	75152951	75170334	789624	4	81,58,127,2984,	0,4327,18188,20671,
#Partially deleted in new
chr16	75149050	75169326	chr16:75149050-75169326	1	+	75152951	75169324	789624	4	217,58,144,74,	0,3858,17719,20202,
#Partially deleted in new
chr16	75192464	75193247	chr16:75192464-75193247	7	-	75192464	75192464	16724991	1	783,	0,
#Deleted in new
chr16	75204095	75207185	chr16:75204095-75207185	3	-	75204160	75207141	789624	7	227,134,181,79,80,104,96,	0,677,1237,1646,1817,1994,2994,
#Deleted in new
chr16	75204102	75205795	chr16:75204102-75205795	0	-	75204160	75205795	789624	4	220,110,181,54,	0,694,1230,1639,
#Deleted in new
chr16	75204102	75205992	chr16:75204102-75205992	0	-	75204317	75205992	789624	4	220,181,79,80,	0,1230,1639,1810,
#Deleted in new
chr16	75204105	75205804	chr16:75204105-75205804	0	-	75204317	75205804	789624	4	217,165,181,63,	0,636,1227,1636,
#Deleted in new
chr16	75204136	75207159	chr16:75204136-75207159	0	-	75204136	75204136	8553170	4	186,741,251,1070,	0,636,1605,1953,
#Deleted in new
chr16	75204276	75205961	chr16:75204276-75205961	0	-	75204276	75204276	8553170	4	46,134,181,220,	0,496,1056,1465,
#Partially deleted in new
chr16	75218999	75224924	chr16:75218999-75224924	3	+	75219007	75224866	789624	7	60,104,80,79,181,134,220,	0,3768,3969,4141,4448,5055,5705,
#Deleted in new
chr16	75222609	75223607	chr16:75222609-75223607	0	+	75222643	75223607	789624	4	262,80,79,160,	0,359,531,838,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	75224816	75226338	chr16:75224816-75226338	0	+	75224816	75224866	789624	2	581,695,	0,827,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	75226073	75228197	chr16:75226073-75228197	7	+	75226073	75226073	16724991	4	652,178,216,208,	0,746,1017,1916,
#Partially deleted in new
chr16	75226340	75228115	chr16:75226340-75228115	5	+	75226340	75226340	16724991	4	52,79,81,126,	0,306,807,1649,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	75226381	75228194	chr16:75226381-75228194	4	+	75226381	75226381	16724991	5	21,233,178,216,205,	0,111,438,709,1608,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	75226516	75227306	chr16:75226516-75227306	4	+	75226516	75226516	16724991	2	481,216,	0,574,
#Deleted in new
chr16	75226985	75228195	chr16:75226985-75228195	4	+	75226985	75226985	16724991	2	321,206,	0,1004,
#Partially deleted in new
chr16	75228186	75268053	chr16:75228186-75268053	1	-	75229510	75267980	0	7	1837,90,1098,117,162,621,139,	0,5659,6702,8695,8996,14283,39728,
#Partially deleted in new
chr16	75229029	75251609	chr16:75229029-75251609	3	-	75229510	75251482	0	7	994,90,1098,117,162,621,139,	0,4816,5859,7852,8153,13440,22441,
#Partially deleted in new
chr16	75229030	75265215	chr16:75229030-75265215	0	-	75264326	75264500	789624	7	993,90,1098,117,162,621,1578,	0,4815,5858,7851,8152,13439,34607,
#Partially deleted in new
chr16	75229036	75236503	chr16:75229036-75236503	0	-	75229036	75229036	8553170	3	987,90,1615,	0,4809,5852,
#Partially deleted in new
chr16	75229036	75238660	chr16:75229036-75238660	0	-	75229036	75229036	8553170	6	987,90,1098,117,162,570,	0,4809,5852,7845,8146,9054,
#Partially deleted in new
chr16	75229061	75265948	chr16:75229061-75265948	1	-	75229510	75252246	0	8	962,90,1098,117,162,177,164,124,	0,4784,5827,7820,8121,13852,23173,36763,
#Partially deleted in new
chr16	75229102	75266007	chr16:75229102-75266007	1	-	75229510	75265836	0	7	921,90,1098,117,162,621,183,	0,4743,5786,7779,8080,13367,36722,
#Partially deleted in new
chr16	75229158	75266007	chr16:75229158-75266007	1	-	75229510	75264500	0	8	865,90,1098,117,162,621,251,183,	0,4687,5730,7723,8024,13311,35192,36666,
#Partially deleted in new
chr16	75229452	75248240	chr16:75229452-75248240	1	-	75229510	75248059	0	7	571,90,1098,117,162,621,187,	0,4393,5436,7429,7730,13017,18601,
#Partially deleted in new
chr16	75229454	75266781	chr16:75229454-75266781	1	-	75229510	75266779	0	7	569,90,1098,117,162,621,68,	0,4391,5434,7427,7728,13015,37259,
#Partially deleted in new
chr16	75229510	75251482	chr16:75229510-75251482	1	-	75229510	75251482	0	7	513,90,1098,171,162,621,12,	0,4335,5378,7317,7672,12959,21960,
#Deleted in new
chr16	75235667	75242702	chr16:75235667-75242702	0	-	75235667	75242702	789624	3	319,162,233,	0,1515,6802,
#Deleted in new
chr16	75236695	75237431	chr16:75236695-75237431	0	-	75236695	75236695	8553170	2	303,249,	0,487,
#Partially deleted in new
chr16	75242610	75264416	chr16:75242610-75264416	0	-	75242610	75243015	789624	2	480,76,	0,21730,
#Partially deleted in new
chr16	75242614	75251880	chr16:75242614-75251880	0	-	75242614	75243015	789624	2	476,82,	0,9184,
#Partially deleted in new
chr16	75242631	75248943	chr16:75242631-75248943	0	-	75242631	75243015	789624	2	459,88,	0,6224,
#Partially deleted in new
chr16	75242655	75256280	chr16:75242655-75256280	0	-	75242655	75243015	789624	2	435,139,	0,13486,
#Partially deleted in new
chr16	75242775	75250947	chr16:75242775-75250947	0	-	75242775	75243015	789624	2	315,279,	0,7893,
#Partially deleted in new
chr16	75242839	75266382	chr16:75242839-75266382	0	-	75242839	75243015	789624	2	251,307,	0,23236,
#Partially deleted in new
chr16	75242864	75249966	chr16:75242864-75249966	0	-	75242864	75243015	789624	2	226,355,	0,6747,
#Partially deleted in new
chr16	75243054	75250104	chr16:75243054-75250104	0	-	75243054	75243054	8553170	2	36,540,	0,6510,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	75245993	75250077	chr16:75245993-75250077	3	-	75245993	75245993	8553170	1	4084,	0,
#Deleted in new
chr16	75263875	75265215	chr16:75263875-75265215	1	-	75264326	75264500	789624	1	1340,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	75286711	75286800	chr16:75286711-75286800	3	-	75286711	75286711	8553170	1	89,	0,
#Partially deleted in new
chr16	75293697	75306545	chr16:75293697-75306545	0	-	75293697	75293697	8553170	3	345,159,159,	0,11326,12689,
#Partially deleted in new
chr16	75293709	75433485	chr16:75293709-75433485	3	-	75293951	75433352	789624	7	333,159,120,128,220,118,197,	0,11314,101380,118115,118825,120868,139579,
#Partially deleted in new
chr16	75293905	75363035	chr16:75293905-75363035	0	-	75293905	75293905	8553170	3	137,159,161,	0,11118,68969,
#Partially deleted in new
chr16	75293907	75305438	chr16:75293907-75305438	0	-	75293907	75293907	8553170	3	135,149,415,	0,7849,11116,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	75321889	75325048	chr16:75321889-75325048	3	-	75321889	75321889	8553170	2	44,383,	0,2776,
#Partially deleted in new
chr16	75372203	75395119	chr16:75372203-75395119	0	-	75372546	75395119	789624	2	365,30,	0,22886,
#Partially deleted in new
chr16	75372290	75395136	chr16:75372290-75395136	0	-	75391495	75395136	789624	3	278,129,47,	0,19089,22799,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	75379817	75381260	chr16:75379817-75381260	3	-	75379817	75379817	8553170	2	317,57,	0,1386,
#Partially deleted in new
chr16	75391281	75395211	chr16:75391281-75395211	0	-	75391281	75391281	8553170	2	227,122,	0,3808,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	75394681	75433461	chr16:75394681-75433461	0	-	75394681	75394681	8553170	5	528,128,220,118,173,	0,17143,17853,19896,38607,
#Partially deleted in new
chr16	75395134	75433473	chr16:75395134-75433473	0	-	75395134	75395134	8553170	4	75,128,220,185,	0,16690,17400,38154,
#Deleted in new
chr16	75409331	75409466	chr16:75409331-75409466	3	-	75409331	75409331	8553170	1	135,	0,
#Partially deleted in new
chr16	75412683	75464706	chr16:75412683-75464706	1	-	75412683	75464600	789624	4	71,118,102,239,	0,1894,39054,51784,
#Partially deleted in new
chr16	75412702	75464552	chr16:75412702-75464552	0	-	75412702	75412702	8553170	2	52,85,	0,51765,
#Partially deleted in new
chr16	75412703	75464552	chr16:75412703-75464552	2	-	75412703	75464552	789624	3	51,118,85,	0,1874,51764,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	75414632	75433391	chr16:75414632-75433391	0	-	75414632	75419105	789624	3	63,176,103,	0,4385,18656,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	75433835	75436392	chr16:75433835-75436392	3	+	75433835	75433835	8553170	1	2557,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	75443053	75464689	chr16:75443053-75464689	1	-	75447557	75464600	789624	3	4635,102,222,	0,8684,21414,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	75443247	75464689	chr16:75443247-75464689	0	-	75447557	75464600	789624	4	2315,1706,102,222,	0,2735,8490,21220,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	75445713	75464416	chr16:75445713-75464416	1	-	75447557	75464250	789624	3	1975,171,185,	0,5955,18518,
#Partially deleted in new
chr16	75447018	75464698	chr16:75447018-75464698	3	-	75447557	75464600	789624	3	670,171,231,	0,4650,17449,
#Partially deleted in new
chr16	75447201	75465497	chr16:75447201-75465497	1	-	75447557	75451837	789624	4	487,169,59,19,	0,4467,5437,18277,
#Partially deleted in new
chr16	75447309	75464737	chr16:75447309-75464737	1	-	75447557	75451837	789624	3	379,102,66,	0,4428,17362,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	75451435	75464672	chr16:75451435-75464672	1	-	75451630	75464600	789624	2	404,205,	0,13032,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	75458251	75460017	chr16:75458251-75460017	3	-	75458251	75458251	8553170	2	724,128,	0,1638,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	75472051	75495028	chr16:75472051-75495028	3	-	75478640	75479828	789624	3	7793,75,89,	0,9765,22888,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	75473127	75495407	chr16:75473127-75495407	1	-	75478640	75479828	8553170	3	6717,75,468,	0,8689,21812,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	75473180	75495308	chr16:75473180-75495308	0	-	75478640	75479828	8553170	4	328,1761,165,369,	0,4903,8636,21759,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	75473360	75495445	chr16:75473360-75495445	0	-	75478640	75479828	8553170	4	107,1312,75,506,	0,5172,8456,21579,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	75475895	75495407	chr16:75475895-75495407	3	+	75475895	75475895	8553170	2	425,148,	0,19364,
#Partially deleted in new
chr16	75478451	75495384	chr16:75478451-75495384	1	-	75478640	75479828	789624	4	1393,75,156,445,	0,3365,12162,16488,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	75497947	75498289	chr16:75497947-75498289	3	-	75497947	75497947	8553170	1	342,	0,
#Partially deleted in new
chr16	75499787	75505283	chr16:75499787-75505283	5	-	75499787	75499787	16724991	5	178,105,81,144,129,	0,533,2748,4893,5367,
#Partially deleted in new
chr16	75504657	75516280	chr16:75504657-75516280	7	-	75504657	75504657	16724991	3	167,221,78,	0,497,11545,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	75528531	75545428	chr16:75528531-75545428	3	-	75533169	75545428	789624	5	1806,65,95,82,77,	0,3044,4557,14070,16820,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	75528534	75535170	chr16:75528534-75535170	3	-	75529148	75530384	789624	3	3106,95,44,	0,4554,6592,
#Partially deleted in new
chr16	75530104	75535247	chr16:75530104-75535247	0	-	75530104	75531640	789624	4	233,65,95,121,	0,1471,2984,5022,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	75536743	75556286	chr16:75536743-75556286	3	-	75539993	75556209	789624	7	3431,106,82,144,129,170,216,	0,4606,5858,8608,9082,19060,19327,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	75538135	75556268	chr16:75538135-75556268	0	-	75546065	75556209	789624	7	2039,106,82,144,252,170,198,	0,3214,4466,7216,7690,17668,17935,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	75538150	75556238	chr16:75538150-75556238	1	-	75539993	75556199	789624	6	2024,106,82,144,129,435,	0,3199,4451,7201,7675,17653,
#Partially deleted in new
chr16	75538349	75542044	chr16:75538349-75542044	0	-	75538349	75538349	8553170	2	1825,695,	0,3000,
#Partially deleted in new
chr16	75539753	75556240	chr16:75539753-75556240	1	-	75539993	75556209	789624	6	421,106,82,129,170,170,	0,1596,2848,6072,16050,16317,
#Partially deleted in new
chr16	75540008	75556233	chr16:75540008-75556233	0	-	75542645	75556209	789624	7	166,106,82,144,91,170,163,	0,1341,2593,5343,5855,15795,16062,
#Partially deleted in new
chr16	75540120	75555271	chr16:75540120-75555271	0	-	75540120	75540120	8553170	6	54,106,82,144,129,53,	0,1229,2481,5231,5705,15098,
#Partially deleted in new
chr16	75541373	75556245	chr16:75541373-75556245	0	-	75541373	75541373	8553170	4	82,129,170,175,	0,1181,14430,14697,
#Partially deleted in new
chr16	75541398	75608445	chr16:75541398-75608445	3	-	75541398	75541398	8553170	8	57,82,144,129,170,87,100,29,	0,1203,3953,4427,14405,61686,66825,67018,
#Partially deleted in new
chr16	75545976	75556262	chr16:75545976-75556262	0	-	75545976	75545976	8553170	2	101,459,	0,9827,
#Deleted in new
chr16	75554922	75555925	chr16:75554922-75555925	0	-	75555761	75555925	789624	1	1003,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	75556391	75557059	chr16:75556391-75557059	3	+	75556391	75556391	8553170	1	668,	0,
#Partially deleted in new
chr16	75566350	75577881	chr16:75566350-75577881	3	+	75566486	75577369	0	4	170,56,173,603,	0,501,1686,10928,
#Deleted in new
chr16	75566374	75568405	chr16:75566374-75568405	1	+	75566486	75568213	789624	3	146,56,369,	0,477,1662,
#Partially deleted in new
chr16	75566388	75577881	chr16:75566388-75577881	1	+	75566486	75577317	789624	3	132,56,603,	0,463,10890,
#Partially deleted in new
chr16	75566597	75577530	chr16:75566597-75577530	1	+	75568126	75577369	789624	4	165,56,173,252,	0,254,1439,10681,
#Deleted in new
chr16	75572184	75572685	chr16:75572184-75572685	3	-	75572184	75572184	8553170	1	501,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	75575607	75577881	chr16:75575607-75577881	0	+	75575607	75575607	8553170	1	2274,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	75596980	75603134	chr16:75596980-75603134	0	-	75597382	75603134	789624	2	409,50,	0,6104,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	75599099	75622466	chr16:75599099-75622466	0	-	75618624	75620799	789624	10	1249,87,100,146,619,131,113,69,190,64,	0,3985,9124,9743,13143,18042,19486,21166,21531,23303,
#Partially deleted in new
chr16	75599876	75602003	chr16:75599876-75602003	0	-	75599876	75599876	8553170	2	472,172,	0,1955,
#Partially deleted in new
chr16	75600001	75623300	chr16:75600001-75623300	3	-	75600215	75620799	789624	11	347,87,100,146,619,131,55,69,190,62,63,	0,3083,8222,8841,12241,17140,18584,20264,20629,22401,23236,
#Partially deleted in new
chr16	75612787	75623281	chr16:75612787-75623281	0	-	75617234	75620799	789624	6	74,131,69,190,62,44,	0,4354,7478,7843,9615,10450,
#Partially deleted in new
chr16	75612803	75623281	chr16:75612803-75623281	0	-	75612803	75620799	789624	6	58,131,55,69,190,44,	0,4338,5782,7462,7827,10434,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	75617224	75623275	chr16:75617224-75623275	0	-	75617224	75617224	8553170	7	48,55,112,69,190,62,38,	0,1361,2407,3041,3406,5178,6013,
#Partially deleted in new
chr16	75617236	75622783	chr16:75617236-75622783	0	-	75617236	75620799	789624	5	36,55,69,190,381,	0,1349,3029,3394,5166,
#Partially deleted in new
chr16	75620768	75623259	chr16:75620768-75623259	0	-	75620768	75620799	789624	3	52,62,468,	0,1634,2023,
#Partially deleted in new
chr16	75627473	75647665	chr16:75627473-75647665	1	-	75627894	75644428	0	15	520,144,127,86,86,174,163,120,126,187,94,166,160,180,88,	0,1095,1941,2949,3694,3942,4219,6699,8206,8438,8980,12710,14090,16809,20104,
#Partially deleted in new
chr16	75627723	75647679	chr16:75627723-75647679	3	-	75627894	75647639	0	14	270,144,127,86,86,174,163,120,126,187,94,166,160,102,	0,845,1691,2699,3444,3692,3969,6449,7956,8188,8730,12460,13840,19854,
#Partially deleted in new
chr16	75627757	75647624	chr16:75627757-75647624	1	-	75627931	75644428	789624	3	232,180,47,	0,16525,19820,
#Partially deleted in new
chr16	75627769	75647648	chr16:75627769-75647648	0	-	75636478	75644428	789624	14	224,144,127,86,86,174,163,120,126,187,94,160,180,71,	0,799,1645,2653,3398,3646,3923,6403,7910,8142,8684,13794,16513,19808,
#Deleted in new
chr16	75627845	75629009	chr16:75627845-75629009	0	-	75627845	75627845	8553170	2	148,441,	0,723,
#Partially deleted in new
chr16	75631721	75647651	chr16:75631721-75647651	0	-	75636089	75647639	789624	6	134,120,126,187,160,74,	0,2451,3958,4190,9842,15856,
#Partially deleted in new
chr16	75633970	75648643	chr16:75633970-75648643	0	-	75633970	75633970	8553170	7	322,126,187,94,166,160,176,	0,1709,1941,2483,6213,7593,14497,
#Partially deleted in new
chr16	75634240	75647607	chr16:75634240-75647607	0	-	75636478	75647607	789624	6	52,126,187,94,160,30,	0,1439,1671,2213,7323,13337,
#Deleted in new
chr16	75635323	75636073	chr16:75635323-75636073	0	-	75635652	75636073	789624	2	482,162,	0,588,
#Partially deleted in new
chr16	75635698	75647650	chr16:75635698-75647650	0	-	75635698	75636467	789624	7	107,187,94,166,160,83,73,	0,213,755,4485,5865,7054,11879,
#Partially deleted in new
chr16	75635790	75647655	chr16:75635790-75647655	0	-	75635790	75644428	789624	7	15,187,94,166,160,180,192,	0,121,663,4393,5773,8492,11673,
#Partially deleted in new
chr16	75639781	75641602	chr16:75639781-75641602	0	-	75639781	75639781	8553170	2	568,39,	0,1782,
#Partially deleted in new
chr16	75647785	75657432	chr16:75647785-75657432	3	+	75647882	75656611	0	3	767,125,1226,	0,6487,8421,
#Partially deleted in new
chr16	75648395	75656433	chr16:75648395-75656433	0	+	75648395	75654285	789624	3	287,125,227,	0,5877,7811,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	75656206	75761872	chr16:75656206-75761872	0	+	75656206	75760975	789624	3	135,91,1040,	0,103843,104626,
#Partially deleted in new
chr16	75660226	75677009	chr16:75660226-75677009	3	-	75660253	75676999	789624	3	1023,194,23,	0,9136,16760,
#Partially deleted in new
chr16	75693928	75701459	chr16:75693928-75701459	3	-	75693928	75701418	789624	5	597,155,106,155,66,	0,2032,2909,6086,7465,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	75698530	75698816	chr16:75698530-75698816	3	-	75698530	75698530	8553170	1	286,	0,
#Partially deleted in new
chr16	75709055	75709815	chr16:75709055-75709815	7	-	75709055	75709055	16724991	1	760,	0,
#Partially deleted in new
chr16	75714223	75726442	chr16:75714223-75726442	3	-	75714223	75726442	789624	3	999,194,25,	0,4041,12194,
#Partially deleted in new
chr16	75838629	75860867	chr16:75838629-75860867	0	-	75838629	75838629	8553170	3	271,196,109,	0,12797,22129,
#Partially deleted in new
chr16	75838772	75860832	chr16:75838772-75860832	3	-	75838772	75838772	8553170	4	128,101,180,74,	0,1125,12670,21986,
#Partially deleted in new
chr16	75838835	75860847	chr16:75838835-75860847	0	-	75838835	75838835	8553170	4	65,98,192,89,	0,1062,12595,21923,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	76107282	76147779	chr16:76107282-76147779	3	-	76107282	76107282	8553170	4	221,107,42,220,	0,953,33079,40277,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	76136121	76147806	chr16:76136121-76147806	1	-	76136121	76136121	8553170	2	244,247,	0,11438,
#Partially deleted in new
chr16	76228384	76262365	chr16:76228384-76262365	3	-	76228384	76228384	8553170	3	475,129,135,	0,2932,33846,
#Deleted in new
chr16	76235054	76235623	chr16:76235054-76235623	7	-	76235054	76235054	16724991	1	569,	0,
#Partially deleted in new
chr16	76277277	76559238	chr16:76277277-76559238	1	+	76277662	76558683	789624	24	470,111,194,148,204,185,144,262,150,172,107,120,198,157,128,171,219,240,229,130,88,219,72,749,	0,39135,78040,150174,170734,171489,172437,175230,184678,190074,198661,202141,212408,217632,221289,243862,244761,258267,260838,262445,263425,276005,276558,281212,
#Partially deleted in new
chr16	76277277	76559238	chr16:76277277-76559238	1	+	76277662	76558683	789624	23	470,111,194,148,204,185,262,150,172,107,120,198,157,128,171,219,240,229,130,88,219,72,749,	0,39135,78040,150174,170734,171489,175230,184678,190074,198661,202141,212408,217632,221289,243862,244761,258267,260838,262445,263425,276005,276558,281212,
#Partially deleted in new
chr16	76277277	76559238	chr16:76277277-76559238	3	+	76277662	76558683	0	24	470,111,194,148,204,185,144,262,150,172,107,120,198,157,128,171,219,240,225,134,88,219,72,749,	0,39135,78040,150174,170734,171489,172437,175230,184678,190074,198661,202141,212408,217632,221289,243862,244761,258267,260838,262441,263425,276005,276558,281212,
#Partially deleted in new
chr16	76277662	76558683	chr16:76277662-76558683	1	+	76277662	76558683	789624	23	85,111,194,148,204,185,262,150,172,107,120,198,157,128,171,219,240,225,134,88,219,72,194,	0,38750,77655,149789,170349,171104,174845,184293,189689,198276,201756,212023,217247,220904,243477,244376,257882,260453,262056,263040,275620,276173,280827,
#Deleted in new
chr16	76287629	76287739	chr16:76287629-76287739	3	+	76287629	76287629	8553170	1	110,	0,
#Partially deleted in new
chr16	76316179	76558963	chr16:76316179-76558963	1	+	76316318	76558683	789624	23	344,194,148,204,185,144,262,150,172,107,120,198,157,128,171,219,240,225,134,88,219,72,474,	0,39138,111272,131832,132587,133535,136328,145776,151172,159759,163239,173506,178730,182387,204960,205859,219365,221936,223539,224523,237103,237656,242310,
#Partially deleted in new
chr16	76469507	76469595	chr16:76469507-76469595	3	-	76469507	76469507	8553170	1	88,	0,
#Partially deleted in new
chr16	76553416	76819624	chr16:76553416-76819624	3	+	76553416	76635501	789624	4	85,72,127,39,	0,419,82080,266169,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	76557375	76559231	chr16:76557375-76559231	0	+	76557375	76557375	8553170	1	1856,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	76582555	76583098	chr16:76582555-76583098	3	+	76582555	76582555	8553170	1	543,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	76634997	76658478	chr16:76634997-76658478	3	+	76634997	76634997	789624	4	152,127,108,1811,	0,499,20559,21670,
#Partially deleted in new
chr16	76736341	76928169	chr16:76736341-76928169	3	+	76736341	76736341	8553170	3	138,54,274,	0,176013,191554,
#Deleted in new
chr16	76868935	76869019	chr16:76868935-76869019	3	+	76868935	76868935	5263520	1	84,	0,
#Partially deleted in new
chr16	76878273	76878936	chr16:76878273-76878936	7	-	76878273	76878273	16724991	1	663,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	77104259	77105297	chr16:77104259-77105297	3	+	77104259	77104259	8553170	1	1038,	0,
#Deleted in new
chr16	77190834	77194360	chr16:77190834-77194360	0	+	77191485	77194360	789624	4	100,158,327,26,	0,641,2616,3500,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	77190918	77202405	chr16:77190918-77202405	3	+	77191485	77198308	789624	6	340,158,327,820,148,4298,	0,557,2532,3416,4616,7189,
#Deleted in new
chr16	77190926	77194625	chr16:77190926-77194625	0	+	77191485	77194625	789624	4	334,158,327,291,	0,549,2524,3408,
#Deleted in new
chr16	77190940	77193634	chr16:77190940-77193634	0	+	77191485	77193634	789624	2	693,184,	0,2510,
#Deleted in new
chr16	77190962	77193606	chr16:77190962-77193606	0	+	77191485	77193606	789624	3	262,158,156,	0,513,2488,
#Deleted in new
chr16	77190997	77193946	chr16:77190997-77193946	0	+	77190997	77190997	8553170	3	261,158,496,	0,478,2453,
#Deleted in new
chr16	77191030	77194555	chr16:77191030-77194555	0	+	77191485	77193648	789624	4	228,158,341,221,	0,445,2406,3304,
#Partially deleted in new
chr16	77191191	77198673	chr16:77191191-77198673	1	+	77191485	77198308	789624	5	67,158,820,148,566,	0,284,3143,4343,6916,
#Partially deleted in new
chr16	77191199	77198894	chr16:77191199-77198894	1	+	77191221	77198308	789624	4	59,820,148,787,	0,3135,4335,6908,
#Partially deleted in new
chr16	77193967	77199636	chr16:77193967-77199636	0	+	77193967	77193967	8553170	3	1187,148,1529,	0,1567,4140,
#Partially deleted in new
chr16	77199396	77213005	chr16:77199396-77213005	3	+	77199451	77212931	789624	11	116,60,60,75,48,55,64,70,88,73,149,	0,7044,8813,9068,9700,10020,11816,12733,12885,13177,13460,
#Deleted in new
chr16	77212407	77213215	chr16:77212407-77213215	0	+	77212407	77212407	8553170	2	239,359,	0,449,
#Deleted in new
chr16	77212592	77213005	chr16:77212592-77213005	0	+	77212592	77212867	789624	2	54,159,	0,254,
#Deleted in new
chr16	77220405	77221258	chr16:77220405-77221258	7	+	77220405	77220405	16724991	1	853,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	77247812	77289359	chr16:77247812-77289359	0	-	77247973	77289359	789624	2	253,96,	0,41451,
#Partially deleted in new
chr16	77282127	77435114	chr16:77282127-77435114	3	-	77283955	77434695	789624	23	1944,148,213,183,205,127,142,245,124,131,173,149,96,154,138,106,160,84,194,283,317,88,509,	0,7136,9138,10948,12795,15161,18135,37721,38951,40208,43738,53628,59576,71605,73812,77190,79977,81674,82060,85313,149167,152290,152478,
#Partially deleted in new
chr16	77289338	77299950	chr16:77289338-77299950	1	+	77289338	77289338	8553170	2	117,1061,	0,9551,
#Partially deleted in new
chr16	77300038	77321136	chr16:77300038-77321136	0	-	77300038	77300038	8553170	3	366,245,58,	0,19810,21040,
#Partially deleted in new
chr16	77355950	77435034	chr16:77355950-77435034	0	-	77364338	77434695	789624	8	127,106,84,194,287,317,88,429,	0,3367,7851,8237,11486,75344,78467,78655,
#Partially deleted in new
chr16	77364351	77431587	chr16:77364351-77431587	0	-	77364351	77431587	789624	3	30,233,293,	0,3085,66943,
#Partially deleted in new
chr16	77367436	77431633	chr16:77367436-77431633	0	-	77367436	77367436	8553170	2	287,339,	0,63858,
#Partially deleted in new
chr16	77367482	77432448	chr16:77367482-77432448	0	-	77367482	77367482	8553170	3	241,317,35,	0,63812,64931,
#Partially deleted in new
chr16	77367570	77434521	chr16:77367570-77434521	0	-	77367570	77367570	8553170	3	153,317,104,	0,63724,66847,
#Partially deleted in new
chr16	77367609	77431746	chr16:77367609-77431746	0	-	77367609	77367609	8553170	3	110,98,452,	0,11272,63685,
#Partially deleted in new
chr16	77433381	77444336	chr16:77433381-77444336	3	+	77433381	77433381	8553170	2	87,492,	0,10463,
#Partially deleted in new
chr16	77590805	77610681	chr16:77590805-77610681	3	+	77590805	77590805	8553170	3	115,159,145,	0,8279,19731,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	77657173	77660570	chr16:77657173-77660570	3	+	77657173	77657173	8553170	1	3397,	0,
#Partially deleted in new
chr16	77722513	77742260	chr16:77722513-77742260	3	+	77722582	77741950	0	4	104,154,159,679,	0,2917,13314,19068,
#Partially deleted in new
chr16	77722515	77736249	chr16:77722515-77736249	1	+	77722582	77736001	789624	3	102,154,422,	0,2915,13312,
#Partially deleted in new
chr16	77722518	77742258	chr16:77722518-77742258	1	+	77722582	77741950	0	3	99,154,677,	0,2912,19063,
#Partially deleted in new
chr16	77722544	77741824	chr16:77722544-77741824	1	+	77722582	77741594	789624	2	73,243,	0,19037,
#Partially deleted in new
chr16	77737404	77742257	chr16:77737404-77742257	0	+	77737404	77737404	8553170	2	49,676,	0,4177,
#Partially deleted in new
chr16	77741467	77743000	chr16:77741467-77743000	3	-	77741467	77741467	8553170	2	642,158,	0,1375,
#Partially deleted in new
chr16	77752371	77756681	chr16:77752371-77756681	3	+	77752371	77752371	8553170	2	228,866,	0,3444,
#Partially deleted in new
chr16	77788529	77980107	chr16:77788529-77980107	3	+	77788682	77977695	0	9	386,130,216,143,104,56,195,84,2511,	0,28391,36716,74218,87840,90639,96078,183320,189067,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	77800022	77801714	chr16:77800022-77801714	3	+	77800022	77800022	8553170	1	1692,	0,
#Partially deleted in new
chr16	77862747	77882408	chr16:77862747-77882408	0	+	77862747	77862747	8553170	4	143,104,56,312,	0,13622,16421,19349,
#Deleted in new
chr16	77892421	77892915	chr16:77892421-77892915	7	+	77892421	77892421	16724991	1	494,	0,
#Partially deleted in new
chr16	78022514	78032106	chr16:78022514-78032106	3	+	78022599	78030841	789624	3	227,84,1660,	0,5592,7932,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	78022514	78066761	chr16:78022514-78066761	0	+	78022599	78051968	789624	3	227,192,785,	0,29443,43462,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	78029088	78030951	chr16:78029088-78030951	0	+	78029088	78029088	8553170	2	59,505,	0,1358,
#Partially deleted in new
chr16	78048482	78049897	chr16:78048482-78049897	7	-	78048482	78048482	16724991	1	1415,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	78055823	78056927	chr16:78055823-78056927	7	-	78055823	78055823	16724991	1	1104,	0,
#Partially deleted in new
chr16	78099412	79212667	chr16:78099412-79212667	3	+	78099778	79211796	0	9	473,65,58,179,107,89,186,265,1060,	0,9010,10365,15563,64770,287447,325457,333075,1112195,
#Partially deleted in new
chr16	78099429	78278696	chr16:78099429-78278696	1	+	78099778	78109808	789624	5	456,58,179,107,94,	0,10348,15546,64753,179173,
#Partially deleted in new
chr16	78099625	79212319	chr16:78099625-79212319	0	+	78099778	78109808	789624	8	260,58,179,107,89,186,265,712,	0,10152,15350,64557,287234,325244,332862,1111982,
#Partially deleted in new
chr16	78099653	79212667	chr16:78099653-79212667	1	+	78099778	79212134	0	5	232,65,58,179,1060,	0,8769,10124,15322,1111954,
#Partially deleted in new
chr16	78099653	79212667	chr16:78099653-79212667	1	+	78099778	79211796	0	6	232,65,58,179,107,1060,	0,8769,10124,15322,64529,1111954,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	78099653	79212667	chr16:78099653-79212667	1	+	78099778	79211764	789624	6	232,65,58,179,76,1060,	0,8769,10124,15322,657286,1111954,
#Partially deleted in new
chr16	78099655	78119076	chr16:78099655-78119076	0	+	78099655	78099655	8553170	5	230,65,58,179,122,	0,8767,10122,15320,19299,
#Partially deleted in new
chr16	78099655	78424956	chr16:78099655-78424956	0	+	78099778	78109808	789624	5	230,58,107,89,87,	0,10122,64527,287204,325214,
#Deleted in new
chr16	78099674	78100199	chr16:78099674-78100199	1	+	78099778	78099889	0	1	525,	0,
#Partially deleted in new
chr16	78099678	78278696	chr16:78099678-78278696	1	+	78099778	78278656	0	6	207,65,58,179,107,94,	0,8744,10099,15297,64504,178924,
#Partially deleted in new
chr16	78099693	78780449	chr16:78099693-78780449	1	+	78099778	78691277	0	10	192,65,58,179,107,89,186,265,51,35,	0,8729,10084,15282,64489,287166,325176,332794,591548,680721,
#Partially deleted in new
chr16	78099785	78278703	chr16:78099785-78278703	0	+	78099785	78099785	789624	6	214,65,58,179,107,101,	0,8637,9992,15190,64397,178817,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	78123242	78124332	chr16:78123242-78124332	3	+	78123242	78123242	8553170	1	1090,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	78166716	78168514	chr16:78166716-78168514	3	-	78166716	78166716	8553170	1	1798,	0,
#Partially deleted in new
chr16	78237361	78241218	chr16:78237361-78241218	3	-	78237361	78237361	8553170	3	321,101,21,	0,726,3836,
#Deleted in new
chr16	78355528	78355834	chr16:78355528-78355834	7	+	78355528	78355528	16724991	1	306,	0,
#Partially deleted in new
chr16	78424870	78432752	chr16:78424870-78432752	1	+	78424870	78432752	789624	2	185,265,	0,7617,
#Partially deleted in new
chr16	78495925	78506568	chr16:78495925-78506568	3	-	78495925	78495925	8553170	3	506,136,77,	0,7737,10566,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	78525188	78526535	chr16:78525188-78526535	3	-	78525188	78525188	8553170	1	1347,	0,
#Partially deleted in new
chr16	78534373	78535648	chr16:78534373-78535648	3	+	78534373	78534373	8553170	2	180,527,	0,748,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	78550738	78553296	chr16:78550738-78553296	3	-	78550738	78550738	8553170	1	2558,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	78550738	78553290	chr16:78550738-78553290	0	-	78550738	78550738	8553170	1	2552,	0,
#Deleted in new
chr16	78825280	78826006	chr16:78825280-78826006	7	+	78825280	78825280	16724991	1	726,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	78872738	78873505	chr16:78872738-78873505	3	+	78872738	78872738	8553170	1	767,	0,
#Deleted in new
chr16	78890230	78892302	chr16:78890230-78892302	3	+	78890230	78890230	8553170	1	2072,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	78895360	78899644	chr16:78895360-78899644	3	+	78895360	78895360	8553170	1	4284,	0,
#Deleted in new
chr16	78981721	78981843	chr16:78981721-78981843	3	-	78981721	78981721	8553170	1	122,	0,
#Partially deleted in new
chr16	78994344	79004730	chr16:78994344-79004730	3	+	78994344	78994344	8553170	3	56,155,582,	0,1857,9804,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	79016135	79017429	chr16:79016135-79017429	3	+	79016135	79016135	8553170	1	1294,	0,
#Deleted in new
chr16	79077375	79078234	chr16:79077375-79078234	3	-	79077375	79077375	8553170	2	152,324,	0,535,
#Partially deleted in new
chr16	79090049	79101754	chr16:79090049-79101754	3	+	79090049	79090049	8553170	3	36,242,155,	0,11085,11550,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	79105956	79110882	chr16:79105956-79110882	3	+	79105956	79105956	8553170	3	36,141,200,	0,663,4726,
#Partially deleted in new
chr16	79196358	79212300	chr16:79196358-79212300	0	+	79196358	79196358	8553170	2	123,693,	0,15249,
#Deleted in new
chr16	79202623	79206739	chr16:79202623-79206739	3	-	79202623	79202623	8553170	1	4116,	0,
#Deleted in new
chr16	79208492	79211264	chr16:79208492-79211264	3	-	79208492	79208492	8553170	3	1115,69,34,	0,2049,2738,
#Partially deleted in new
chr16	79212710	79229453	chr16:79212710-79229453	3	-	79212710	79212710	8553170	2	191,144,	0,16599,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	79264453	79264573	chr16:79264453-79264573	7	+	79264453	79264453	16724991	1	120,	0,
#Partially deleted in new
chr16	79505602	79516293	chr16:79505602-79516293	3	+	79505602	79505602	8553170	2	106,313,	0,10378,
#Partially deleted in new
chr16	79585842	79599902	chr16:79585842-79599902	1	-	79585907	79599902	789624	2	99,1118,	0,12942,
#Deleted in new
chr16	79593837	79600714	chr16:79593837-79600714	3	-	79594459	79599902	789624	2	716,1930,	0,4947,
#Deleted in new
chr16	79594330	79600714	chr16:79594330-79600714	1	-	79598780	79599902	789624	1	6384,	0,
#Deleted in new
chr16	79603571	79604177	chr16:79603571-79604177	3	+	79603571	79603571	8553170	1	606,	0,
#Deleted in new
chr16	79605801	79606605	chr16:79605801-79606605	3	+	79605801	79605801	8553170	1	804,	0,
#Deleted in new
chr16	79619468	79620110	chr16:79619468-79620110	3	+	79619468	79619468	8553170	1	642,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	79675684	79677715	chr16:79675684-79677715	3	-	79675684	79675684	8553170	1	2031,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	79676107	79726429	chr16:79676107-79726429	0	+	79676107	79676107	8553170	4	101,299,73,73,	0,37728,38707,50249,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	79713846	79799090	chr16:79713846-79799090	3	+	79713846	79713846	8553170	6	288,73,195,46,240,652,	0,968,81256,82906,83644,84592,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	79715231	79770563	chr16:79715231-79770563	3	-	79715231	79715231	8553170	4	1609,63,70,117,	0,35982,53921,55215,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	79721311	79770532	chr16:79721311-79770532	1	-	79721311	79721311	789624	6	310,91,63,65,70,86,	0,18835,29902,36339,47841,49135,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	79750691	79770563	chr16:79750691-79770563	0	-	79750691	79750691	8553170	3	585,70,117,	0,18461,19755,
#Partially deleted in new
chr16	79753385	79770301	chr16:79753385-79770301	1	-	79753385	79753385	8553170	4	91,65,70,280,	0,4265,15767,16636,
#Partially deleted in new
chr16	79770470	79801343	chr16:79770470-79801343	1	+	79770470	79770470	789624	4	57,240,252,171,	0,27020,27968,30702,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	79798049	79827150	chr16:79798049-79827150	3	-	79798049	79798049	8553170	2	460,163,	0,28938,
#Deleted in new
chr16	79798533	79799090	chr16:79798533-79799090	0	+	79798533	79798533	8553170	2	157,259,	0,298,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	79798592	79807922	chr16:79798592-79807922	0	+	79798592	79798592	8553170	2	98,502,	0,8828,
#Partially deleted in new
chr16	80040661	80045745	chr16:80040661-80045745	3	+	80040661	80040661	8553170	2	133,398,	0,4686,
#Partially deleted in new
chr16	80065848	80167577	chr16:80065848-80167577	0	+	80065848	80065848	8553170	3	223,169,174,	0,3496,101555,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	80155052	80563135	chr16:80155052-80563135	3	-	80155052	80155052	789624	6	955,69,119,75,145,107,	0,2561,4284,5179,373589,407976,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	80155248	80540947	chr16:80155248-80540947	1	-	80155248	80155248	8553170	5	759,119,355,145,98,	0,4088,335968,373393,385601,
#Deleted in new
chr16	80179128	80180682	chr16:80179128-80180682	3	+	80179128	80179128	8553170	2	121,415,	0,1139,
#Partially deleted in new
chr16	80507568	80540867	chr16:80507568-80540867	0	-	80507568	80507568	8553170	3	201,145,18,	0,21073,33281,
#Partially deleted in new
chr16	80526838	80540953	chr16:80526838-80540953	0	-	80526838	80526838	8553170	3	180,145,104,	0,1803,14011,
#Partially deleted in new
chr16	80528641	80540877	chr16:80528641-80540877	0	-	80528641	80528641	8553170	2	145,273,	0,11963,
#Partially deleted in new
chr16	80540733	80550641	chr16:80540733-80550641	1	+	80540764	80550558	789624	4	121,76,168,127,	0,2542,8750,9781,
#Partially deleted in new
chr16	80540956	80550644	chr16:80540956-80550644	3	+	80541076	80550558	789624	4	123,76,168,130,	0,2319,8527,9558,
#Partially deleted in new
chr16	80540992	80550760	chr16:80540992-80550760	1	+	80541076	80550558	789624	3	87,76,246,	0,2283,9522,
#Partially deleted in new
chr16	80541024	80550639	chr16:80541024-80550639	0	+	80541076	80547843	789624	5	55,76,90,168,125,	0,2251,6733,8459,9490,
#Partially deleted in new
chr16	80541027	80550648	chr16:80541027-80550648	0	+	80541076	80548998	789624	4	52,76,709,134,	0,2248,7915,9487,
#Partially deleted in new
chr16	80547841	80552514	chr16:80547841-80552514	3	-	80547841	80547841	8553170	2	343,191,	0,4482,
#Deleted in new
chr16	80566793	80569687	chr16:80566793-80569687	1	-	80566793	80566793	8553170	3	300,166,872,	0,1154,2022,
#Partially deleted in new
chr16	80567102	80572808	chr16:80567102-80572808	3	-	80567102	80567102	789624	3	414,166,175,	0,845,5531,
#Deleted in new
chr16	80567554	80568898	chr16:80567554-80568898	0	-	80567554	80567554	789624	3	205,166,92,	0,393,1252,
#Deleted in new
chr16	80567557	80568913	chr16:80567557-80568913	0	-	80567557	80567557	8553170	3	202,166,98,	0,390,1258,
#Deleted in new
chr16	80567676	80569270	chr16:80567676-80569270	0	-	80567676	80567676	8553170	3	83,166,46,	0,271,1548,
#Partially deleted in new
chr16	80597905	80804329	chr16:80597905-80804329	3	-	80604387	80804173	0	7	6641,144,211,173,218,592,180,	0,10186,14720,22857,35113,86632,206244,
#Partially deleted in new
chr16	80603915	80804263	chr16:80603915-80804263	1	-	80604387	80804173	789624	8	631,144,211,173,218,3,592,114,	0,4176,8710,16847,29103,58829,80622,200234,
#Partially deleted in new
chr16	80603915	80804263	chr16:80603915-80804263	1	-	80604387	80804173	789624	8	631,144,211,173,218,3,592,114,	0,4176,8710,16847,29103,75818,80622,200234,
#Partially deleted in new
chr16	80603915	80804263	chr16:80603915-80804263	1	-	80604387	80804173	789624	8	631,144,211,173,218,3,592,114,	0,4176,8710,16847,29103,67028,80622,200234,
#Partially deleted in new
chr16	80612639	80639736	chr16:80612639-80639736	0	-	80612639	80612639	8553170	4	197,173,218,67,	0,8123,20379,27030,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	80627550	80628379	chr16:80627550-80628379	3	-	80627550	80627550	8553170	1	829,	0,
#Deleted in new
chr16	80632636	80633180	chr16:80632636-80633180	0	-	80632636	80632636	8553170	2	291,162,	0,382,
#Partially deleted in new
chr16	80684603	80735133	chr16:80684603-80735133	0	-	80684603	80684603	8553170	2	526,31,	0,50499,
#Partially deleted in new
chr16	80736359	80742305	chr16:80736359-80742305	3	+	80736359	80736359	8553170	3	156,88,208,	0,2301,5738,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	80828734	80892595	chr16:80828734-80892595	3	-	80828734	80828734	789624	3	2023,104,91,	0,11384,63770,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	80830493	80870520	chr16:80830493-80870520	1	-	80830493	80830493	8553170	4	264,114,104,73,	0,7438,9625,39954,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	80830530	80892560	chr16:80830530-80892560	0	-	80830530	80830530	8553170	4	227,114,104,56,	0,7401,9588,61974,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	80966447	81007114	chr16:80966447-81007114	1	-	80976092	80997394	789624	4	9732,72,116,381,	0,15358,30866,40286,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	80975800	80998949	chr16:80975800-80998949	0	-	80975800	80975800	8553170	3	379,72,1636,	0,6005,21513,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	80975800	80983335	chr16:80975800-80983335	0	-	80975800	80975800	8553170	3	379,72,154,	0,6005,7381,
#Partially deleted in new
chr16	80975801	80997372	chr16:80975801-80997372	0	-	80978382	80997372	789624	4	378,174,72,59,	0,2440,6004,21512,
#Partially deleted in new
chr16	80975801	80997595	chr16:80975801-80997595	0	-	80975801	80975801	8553170	2	378,282,	0,21512,
#Partially deleted in new
chr16	80975801	80991955	chr16:80975801-80991955	0	-	80975801	80975801	8553170	3	378,72,202,	0,6004,15952,
#Partially deleted in new
chr16	80975803	81006897	chr16:80975803-81006897	0	-	80975803	80975803	789624	3	376,72,164,	0,6002,30930,
#Partially deleted in new
chr16	80975806	81006875	chr16:80975806-81006875	0	-	80996945	80997394	789624	5	373,72,98,116,142,	0,5999,21116,21507,30927,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	80975852	80998659	chr16:80975852-80998659	1	-	80976092	80997394	789624	4	327,72,116,375,	0,5953,21461,22432,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	80975927	81006894	chr16:80975927-81006894	1	-	80976092	80997394	789624	5	252,72,116,70,161,	0,5878,21386,22357,30806,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	80975990	81006894	chr16:80975990-81006894	0	-	80996945	80997394	789624	6	189,72,98,116,189,161,	0,5815,20932,21323,22294,30743,
#Partially deleted in new
chr16	80976002	81020270	chr16:80976002-81020270	3	-	80976092	80997394	789624	5	177,72,116,87,76,	0,5803,21311,25245,44192,
#Partially deleted in new
chr16	80976049	81006886	chr16:80976049-81006886	1	-	80976092	80997394	789624	3	130,116,153,	0,21264,30684,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	80976059	81006854	chr16:80976059-81006854	1	-	80976092	80997394	789624	4	120,116,67,121,	0,21254,22225,30674,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	80980829	81006873	chr16:80980829-81006873	0	-	80980829	80980829	8553170	3	50,72,140,	0,976,25904,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	80982318	80984094	chr16:80982318-80984094	3	-	80982318	80982318	8553170	1	1776,	0,
#Partially deleted in new
chr16	81006497	81029322	chr16:81006497-81029322	3	+	81011939	81028651	0	11	780,181,46,60,77,177,102,64,113,127,754,	0,5432,7638,10828,11260,13602,16099,18217,20028,21673,22071,
#Partially deleted in new
chr16	81006551	81022885	chr16:81006551-81022885	1	+	81011939	81022838	0	7	726,181,46,60,77,177,131,	0,5378,7584,10774,11206,13548,16203,
#Partially deleted in new
chr16	81007206	81029309	chr16:81007206-81029309	1	+	81011939	81028651	0	10	71,181,46,77,177,102,64,113,127,741,	0,4723,6929,10551,12893,15390,17508,19319,20964,21362,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	81007213	81033114	chr16:81007213-81033114	1	+	81011939	81032694	0	11	64,181,46,60,77,177,102,64,113,127,545,	0,4716,6922,10112,10544,12886,15383,17501,19312,20957,25356,
#Partially deleted in new
chr16	81007222	81020146	chr16:81007222-81020146	0	+	81007222	81007222	8553170	4	55,181,46,47,	0,4707,6913,12877,
#Partially deleted in new
chr16	81007243	81028660	chr16:81007243-81028660	1	+	81011939	81028651	0	10	34,181,46,60,77,177,64,113,127,92,	0,4686,6892,10082,10514,12856,17471,19282,20927,21325,
#Partially deleted in new
chr16	81007256	81020276	chr16:81007256-81020276	0	+	81011939	81020276	789624	6	189,181,46,60,77,177,	0,4673,6879,10069,10501,12843,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	81007262	81017836	chr16:81007262-81017836	0	+	81011939	81014195	789624	5	15,181,256,60,79,	0,4667,6873,10063,10495,
#Partially deleted in new
chr16	81016791	81024544	chr16:81016791-81024544	1	-	81016791	81016791	8553170	4	244,73,104,66,	0,3403,3606,7687,
#Partially deleted in new
chr16	81017754	81022874	chr16:81017754-81022874	0	+	81017754	81022730	789624	4	80,177,56,148,	0,2345,4842,4972,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	81018202	81035735	chr16:81018202-81035735	3	-	81018202	81018202	8553170	5	2065,104,127,172,67,	0,2195,6276,16552,17466,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	81022315	81096284	chr16:81022315-81096284	3	-	81034756	81096278	789624	6	2290,172,132,64,80,154,	0,12439,62147,65285,68285,73815,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	81023357	81035759	chr16:81023357-81035759	0	-	81023357	81023357	8553170	4	166,127,172,91,	0,1121,11397,12311,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	81024054	81035734	chr16:81024054-81035734	0	-	81024054	81024054	8553170	3	551,172,66,	0,10700,11614,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	81024298	81096261	chr16:81024298-81096261	0	-	81034756	81096261	789624	3	307,172,131,	0,10456,71832,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	81030769	81031485	chr16:81030769-81031485	3	+	81030769	81030769	8553170	1	716,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	81035846	81047358	chr16:81035846-81047358	3	+	81035870	81044970	789624	4	360,126,200,4198,	0,5509,6434,7314,
#Partially deleted in new
chr16	81036057	81041711	chr16:81036057-81041711	0	+	81036057	81036057	8553170	2	149,356,	0,5298,
#Partially deleted in new
chr16	81037181	81045174	chr16:81037181-81045174	0	+	81037181	81037181	8553170	3	294,126,2014,	0,4174,5979,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	81037186	81047348	chr16:81037186-81047348	1	+	81042286	81044970	789624	4	289,126,200,4188,	0,4169,5094,5974,
#Partially deleted in new
chr16	81037207	81042450	chr16:81037207-81042450	0	+	81042286	81042450	789624	3	291,126,170,	0,4148,5073,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	81040524	81047346	chr16:81040524-81047346	1	+	81042286	81044970	789624	3	957,200,4186,	0,1756,2636,
#Partially deleted in new
chr16	81053496	81077213	chr16:81053496-81077213	1	-	81054070	81063955	789624	4	598,933,248,78,	0,7709,10249,23639,
#Partially deleted in new
chr16	81053586	81096233	chr16:81053586-81096233	0	-	81054017	81096233	789624	5	508,132,64,80,103,	0,30876,34014,37014,42544,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	81053664	81096296	chr16:81053664-81096296	3	-	81057942	81096278	789624	6	430,160,132,64,80,166,	0,4240,30798,33936,36936,42466,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	81055300	81056426	chr16:81055300-81056426	3	+	81055300	81055300	8553170	2	162,431,	0,695,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	81060408	81096284	chr16:81060408-81096284	0	-	81066255	81096278	789624	7	1730,248,89,132,64,80,154,	0,3337,5784,24054,27192,30192,35722,
#Partially deleted in new
chr16	81060979	81077244	chr16:81060979-81077244	3	-	81061160	81063955	789624	4	1159,248,89,109,	0,2766,5213,16156,
#Partially deleted in new
chr16	81061709	81077267	chr16:81061709-81077267	0	-	81061709	81061709	8553170	2	429,132,	0,15426,
#Partially deleted in new
chr16	81063753	81077078	chr16:81063753-81077078	0	-	81063753	81063955	789624	3	240,89,150,	0,2439,13175,
#Partially deleted in new
chr16	81071997	81076598	chr16:81071997-81076598	3	+	81071997	81071997	8553170	2	233,175,	0,4426,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	81077318	81078861	chr16:81077318-81078861	3	+	81077318	81077318	8553170	2	558,530,	0,1013,
#Partially deleted in new
chr16	81081937	81096425	chr16:81081937-81096425	3	-	81082865	81096278	789624	5	1026,132,64,80,295,	0,2525,5663,8663,14193,
#Partially deleted in new
chr16	81082327	81090668	chr16:81082327-81090668	0	-	81082865	81090668	789624	4	636,72,64,68,	0,2135,5273,8273,
#Partially deleted in new
chr16	81082335	81096265	chr16:81082335-81096265	0	-	81084567	81096265	789624	4	628,132,80,135,	0,2127,8265,13795,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	81082404	81096288	chr16:81082404-81096288	1	-	81087635	81096278	789624	3	2190,64,158,	0,5196,13726,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	81082407	81096336	chr16:81082407-81096336	1	-	81084397	81096278	789624	4	2187,64,80,206,	0,5193,8193,13723,
#Partially deleted in new
chr16	81082506	81096240	chr16:81082506-81096240	0	-	81082954	81096240	789624	3	457,80,110,	0,8094,13624,
#Partially deleted in new
chr16	81082691	81091261	chr16:81082691-81091261	0	-	81082691	81082691	8553170	4	272,132,64,661,	0,1771,4909,7909,
#Partially deleted in new
chr16	81082819	81096257	chr16:81082819-81096257	0	-	81082865	81096257	789624	3	144,132,127,	0,1643,13311,
#Partially deleted in new
chr16	81083762	81096163	chr16:81083762-81096163	0	-	81083933	81096163	789624	5	179,132,64,80,33,	0,700,3838,6838,12368,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	81084245	81096318	chr16:81084245-81096318	0	-	81091102	81096278	789624	5	349,64,80,111,188,	0,3355,6355,6751,11885,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	81100874	81113981	chr16:81100874-81113981	0	-	81100874	81100874	8553170	3	410,132,4788,	0,7687,8319,
#Partially deleted in new
chr16	81100878	81136372	chr16:81100878-81136372	0	-	81100878	81100878	8553170	11	406,132,102,211,161,128,134,306,186,138,108,	0,7683,8315,11284,16492,20707,22772,26882,29580,32684,35386,
#Partially deleted in new
chr16	81100888	81181324	chr16:81100888-81181324	1	-	81101122	81181213	789624	32	396,132,102,211,161,128,134,306,186,138,97,205,229,217,218,200,147,179,102,231,194,223,132,127,125,183,132,195,146,177,142,174,	0,7673,8305,11274,16482,20697,22762,26872,29570,32674,36548,38619,40408,46409,47251,48801,50878,53072,53348,55970,58735,59794,62711,63755,64950,67030,70054,73831,74716,76918,78756,80262,
#Partially deleted in new
chr16	81101122	81220370	chr16:81101122-81220370	1	-	81101122	81220370	789624	43	162,132,102,211,161,128,134,306,186,138,97,205,229,217,218,200,147,179,102,231,194,223,132,127,125,183,132,195,146,177,142,121,208,118,50,78,405,230,148,111,186,162,301,	0,7439,8071,11040,16248,20463,22528,26638,29336,32440,36314,38385,40174,46175,47017,48567,50644,52838,53114,55736,58501,59560,62477,63521,64716,66796,69820,73597,74482,76684,78522,80028,84369,87758,89542,93825,97539,101382,106365,107368,113886,115122,118947,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	81106532	81106639	chr16:81106532-81106639	3	-	81106532	81106532	8553170	1	107,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	81123017	81141499	chr16:81123017-81141499	0	-	81123017	81123017	8553170	6	767,217,186,138,97,203,	0,4743,7441,10545,14419,18279,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr16	81130080	81188998	chr16:81130080-81188998	0	-	81130080	81130080	8553170	25	564,138,97,205,229,217,218,200,147,179,102,231,194,223,132,1320,183,132,195,146,177,142,121,208,118,	0,3482,7356,9427,11216,17217,18059,19609,21686,23880,24156,26778,29543,30602,33519,34563,37838,40862,44639,45524,47726,49564,51070,55411,58800,
#Partially deleted in new
chr16	81154129	81159988	chr16:81154129-81159988	0	-	81154129	81154129	8553170	2	209,365,	0,5494,
#Partially deleted in new
chr16	81170288	81220370	chr16:81170288-81220370	3	-	81170739	81220370	789624	18	517,132,195,146,177,142,121,208,118,50,78,405,230,148,111,186,162,301,	0,654,4431,5316,7518,9356,10862,15203,18592,20376,24659,28373,32216,37199,38202,44720,45956,49781,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	81170288	81181329	chr16:81170288-81181329	1	-	81170739	81181213	789624	7	517,132,195,146,177,142,179,	0,654,4431,5316,7518,9356,10862,
#Partially deleted in new
chr16	81170291	81198786	chr16:81170291-81198786	0	-	81170739	81198786	789624	12	514,132,195,146,177,142,121,208,118,50,78,125,	0,651,4428,5313,7515,9353,10859,15200,18589,20373,24656,28370,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	81171214	81181327	chr16:81171214-81181327	1	-	81174542	81181213	789624	4	3700,146,142,177,	0,4390,8430,9936,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	81174862	81181327	chr16:81174862-81181327	0	-	81174862	81174862	8553170	4	52,146,177,177,	0,742,2944,6288,
#Partially deleted in new
chr16	81238447	81291142	chr16:81238447-81291142	3	+	81238908	81290577	789624	11	525,129,130,148,148,224,258,106,95,112,795,	0,7027,21228,23688,26192,29460,31711,42409,47092,48847,51900,
#Partially deleted in new
chr16	81238688	81290700	chr16:81238688-81290700	0	+	81238908	81262188	789624	10	284,129,148,148,224,258,106,95,112,353,	0,6786,23447,25951,29219,31470,42168,46851,48606,51659,
#Partially deleted in new
chr16	81238690	81262543	chr16:81238690-81262543	1	+	81238908	81262301	789624	4	282,129,130,408,	0,6784,20985,23445,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	81261923	81264091	chr16:81261923-81264091	3	-	81261923	81261923	8553170	1	2168,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	81310730	81313423	chr16:81310730-81313423	3	-	81310730	81310730	8553170	1	2693,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	81314946	81390884	chr16:81314946-81390884	3	+	81315113	81377596	0	11	334,115,351,218,122,113,150,137,129,110,13470,	0,36636,39458,41838,42863,47552,48847,50027,50403,62272,62468,
#Partially deleted in new
chr16	81314965	81379910	chr16:81314965-81379910	0	+	81315113	81354414	8553170	10	315,351,218,122,113,150,137,129,110,2496,	0,39439,41819,42844,47533,48828,50008,50384,62253,62449,
#Partially deleted in new
chr16	81314965	81380198	chr16:81314965-81380198	1	+	81315113	81377596	789624	11	315,115,351,218,122,113,150,137,129,110,2784,	0,36617,39439,41819,42844,47533,48828,50008,50384,62253,62449,
#Partially deleted in new
chr16	81315113	81377593	chr16:81315113-81377593	0	+	81315113	81356794	789624	9	167,218,122,113,150,137,129,110,179,	0,41671,42696,47385,48680,49860,50236,62105,62301,
#Partially deleted in new
chr16	81365418	81372024	chr16:81365418-81372024	0	+	81365418	81365418	8553170	2	60,162,	0,6444,
#Deleted in new
chr16	81385017	81385093	chr16:81385017-81385093	3	+	81385017	81385017	5263520	1	76,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	81385462	81387560	chr16:81385462-81387560	3	+	81385462	81385462	8553170	2	43,711,	0,1387,
#Partially deleted in new
chr16	81445169	81711762	chr16:81445169-81711762	3	+	81445241	81709799	789624	21	372,126,51,162,42,63,81,104,105,354,66,27,49,108,117,141,48,147,106,71,2017,	0,162397,175706,207033,212605,215714,219099,224972,226796,233105,246605,247988,248269,251390,254515,256490,257452,258769,260329,261844,264576,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	81463891	81464859	chr16:81463891-81464859	3	-	81463891	81463891	8553170	1	968,	0,
#Deleted in new
chr16	81476022	81476519	chr16:81476022-81476519	7	-	81476022	81476022	16724991	1	497,	0,
#Partially deleted in new
chr16	81495348	81711568	chr16:81495348-81711568	1	+	81495476	81709799	789624	21	146,126,51,162,42,63,81,104,105,354,66,27,49,108,117,141,48,147,106,71,1823,	0,112218,125527,156854,162426,165535,168920,174793,176617,182926,196426,197809,198090,201211,204336,206311,207273,208590,210150,211665,214397,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	81517823	81520617	chr16:81517823-81520617	3	+	81517823	81517823	8553170	1	2794,	0,
#Deleted in new
chr16	81533901	81533966	chr16:81533901-81533966	3	+	81533901	81533901	5263520	1	65,	0,
#Partially deleted in new
chr16	81606947	81711762	chr16:81606947-81711762	1	+	81606947	81709799	789624	21	12,129,51,162,42,63,81,104,105,354,66,27,49,108,117,141,48,147,106,71,2017,	0,616,13928,45255,50827,53936,57321,63194,65018,71327,84827,86210,86491,89612,92737,94712,95674,96991,98551,100066,102798,
#Partially deleted in new
chr16	81610306	81622200	chr16:81610306-81622200	0	+	81610306	81610306	8553170	2	234,1325,	0,10569,
#Partially deleted in new
chr16	81610306	81709957	chr16:81610306-81709957	1	+	81652286	81709799	789624	20	234,51,162,42,63,81,104,105,354,66,27,49,108,117,141,48,147,106,71,212,	0,10569,41896,47468,50577,53962,59835,61659,67968,81468,82851,83132,86253,89378,91353,92315,93632,95192,96707,99439,
#Deleted in new
chr16	81611347	81611408	chr16:81611347-81611408	3	+	81611347	81611347	5263520	1	61,	0,
#Deleted in new
chr16	81617037	81617543	chr16:81617037-81617543	3	-	81617037	81617037	8553170	1	506,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	81618504	81620563	chr16:81618504-81620563	3	+	81618504	81618504	8553170	1	2059,	0,
#Deleted in new
chr16	81630192	81632038	chr16:81630192-81632038	3	+	81630192	81630192	8553170	1	1846,	0,
#Partially deleted in new
chr16	81645357	81710538	chr16:81645357-81710538	1	+	81645580	81709799	789624	19	241,162,42,63,81,104,105,354,66,27,49,108,117,141,48,147,106,71,793,	0,6845,12417,15526,18911,24784,26608,32917,46417,47800,48081,51202,54327,56302,57264,58581,60141,61656,64388,
#Partially deleted in new
chr16	81645359	81652290	chr16:81645359-81652290	0	+	81645359	81645359	8553170	2	422,88,	0,6843,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	81651190	81667276	chr16:81651190-81667276	1	+	81652286	81664463	789624	5	237,162,42,63,3008,	0,1012,6584,9693,13078,
#Partially deleted in new
chr16	81691655	81700579	chr16:81691655-81700579	0	+	81691655	81691655	8553170	6	185,27,49,108,117,70,	0,1502,1783,4904,8029,8854,
#Partially deleted in new
chr16	81693186	81697847	chr16:81693186-81697847	0	+	81693186	81693186	8553170	2	301,1288,	0,3373,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	81695436	81698121	chr16:81695436-81698121	0	+	81695436	81695436	8553170	1	2685,	0,
#Deleted in new
chr16	81703856	81707085	chr16:81703856-81707085	0	+	81703856	81703856	8553170	3	229,106,72,	0,1642,3157,
#Partially deleted in new
chr16	81738247	81739281	chr16:81738247-81739281	0	+	81738247	81738247	8553170	2	255,134,	0,900,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	81739073	81740587	chr16:81739073-81740587	2	+	81739073	81739073	8553170	3	363,120,122,	0,1186,1392,
#Partially deleted in new
chr16	81739081	81766962	chr16:81739081-81766962	1	+	81739081	81739081	8553170	4	304,116,97,239,	0,1182,16788,27642,
#Partially deleted in new
chr16	81739096	81859163	chr16:81739096-81859163	0	+	81785989	81859163	789624	6	289,97,240,144,94,48,	0,16773,46846,115347,119166,120019,
#Partially deleted in new
chr16	81739102	81766772	chr16:81739102-81766772	0	+	81739102	81739102	8553170	3	334,97,49,	0,16767,27621,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	81739302	81740587	chr16:81739302-81740587	1	+	81739302	81739302	8553170	3	432,120,122,	0,957,1163,
#Partially deleted in new
chr16	81739336	81766887	chr16:81739336-81766887	1	+	81739336	81739336	8553170	3	100,143,164,	0,16487,27387,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	81739625	81767868	chr16:81739625-81767868	1	+	81739625	81739625	8553170	5	109,120,97,74,394,	0,634,16244,27098,27849,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr16	81779257	81962693	chr16:81779257-81962693	3	+	81785989	81957998	0	33	167,240,144,94,48,85,84,44,73,102,119,86,121,169,105,90,176,201,120,181,72,110,97,67,158,103,210,146,115,168,89,185,4738,	0,6685,75186,79005,79858,89956,91594,101652,104011,109914,112214,114451,116549,121354,126145,128427,129158,131262,133339,140226,141940,144227,147824,149300,152239,155171,156911,158500,159543,160634,166917,177437,178698,
#Partially deleted in new
chr16	81779341	81883591	chr16:81779341-81883591	0	+	81779341	81779341	8553170	8	83,240,144,48,85,84,44,323,	0,6601,75102,79774,89872,91510,101568,103927,
#Partially deleted in new
chr16	81785745	81921610	chr16:81785745-81921610	0	+	81785745	81785745	8553170	20	437,144,94,48,85,84,44,73,102,119,86,121,169,105,90,176,201,120,181,413,	0,68698,72517,73370,83468,85106,95164,97523,103426,105726,107963,110061,114866,119657,121939,122670,124774,126851,133738,135452,
#Partially deleted in new
chr16	81785989	81958020	chr16:81785989-81958020	1	+	81785989	81957960	789624	33	193,144,94,48,85,84,44,73,102,119,86,121,169,105,90,176,201,120,181,72,110,97,67,158,103,210,146,115,168,89,153,31,65,	0,68454,72273,73126,83224,84862,94920,97279,103182,105482,107719,109817,114622,119413,121695,122426,124530,126607,133494,135208,137495,141092,142568,145507,148439,150179,151768,152811,153902,160185,170705,170859,171966,
#Partially deleted in new
chr16	81798465	81869233	chr16:81798465-81869233	0	+	81798465	81798465	8553170	5	517,144,94,48,20,	0,55978,59797,60650,70748,
#Partially deleted in new
chr16	81842719	81869277	chr16:81842719-81869277	0	+	81842719	81842719	8553170	6	148,77,144,94,48,64,	0,9330,11724,15543,16396,26494,
#Deleted in new
chr16	81857944	81859269	chr16:81857944-81859269	0	+	81857944	81857944	8553170	2	412,154,	0,1171,
#Partially deleted in new
chr16	81883268	81898656	chr16:81883268-81898656	0	+	81883268	81897909	789624	6	73,102,119,86,121,781,	0,5903,8203,10440,12538,14607,
#Partially deleted in new
chr16	81889338	81900780	chr16:81889338-81900780	0	+	81889338	81889338	8553170	5	61,119,86,121,169,	0,2133,4370,6468,11273,
#Partially deleted in new
chr16	81891530	81906384	chr16:81891530-81906384	0	+	81891530	81895882	789624	4	60,121,105,168,	0,4276,13872,14686,
#Partially deleted in new
chr16	81895618	81905487	chr16:81895618-81905487	0	+	81895618	81895618	8553170	3	309,169,85,	0,4993,9784,
#Partially deleted in new
chr16	81923414	81928831	chr16:81923414-81928831	0	+	81923414	81923414	8553170	3	180,97,274,	0,3667,5143,
#Partially deleted in new
chr16	81931260	81936210	chr16:81931260-81936210	0	+	81931260	81931260	8553170	3	394,103,42,	0,3168,4908,
#Deleted in new
chr16	81937346	81940059	chr16:81937346-81940059	0	+	81937346	81937346	8553170	3	557,115,168,	0,1454,2545,
#Deleted in new
chr16	81938477	81939962	chr16:81938477-81939962	0	+	81938477	81938477	8553170	3	74,115,71,	0,323,1414,
#Partially deleted in new
chr16	81938627	81956730	chr16:81938627-81956730	0	+	81938627	81938627	8553170	4	288,168,89,36,	0,1264,7547,18067,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	81961925	81962243	chr16:81961925-81962243	3	+	81961925	81961925	8553170	1	318,	0,
#Deleted in new
chr16	81987947	81989016	chr16:81987947-81989016	3	+	81987947	81987947	8553170	2	58,296,	0,773,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	81988854	82011488	chr16:81988854-82011488	3	-	81999110	82000858	789624	3	11370,94,102,	0,11936,22532,
#Partially deleted in new
chr16	81999698	82011481	chr16:81999698-82011481	0	-	81999698	82000359	789624	4	526,117,94,95,	0,602,1092,11688,
#Partially deleted in new
chr16	81999754	82011465	chr16:81999754-82011465	0	-	81999754	81999754	8553170	4	470,94,228,79,	0,1036,7886,11632,
#Partially deleted in new
chr16	82035003	82071070	chr16:82035003-82071070	0	+	82068312	82071070	789624	3	145,213,129,	0,33166,35938,
#Partially deleted in new
chr16	82035231	82098534	chr16:82035231-82098534	3	+	82035424	82098436	789624	5	458,213,186,138,460,	0,32938,35710,55670,62843,
#Partially deleted in new
chr16	82035273	82071076	chr16:82035273-82071076	0	+	82035424	82071076	789624	2	416,135,	0,35668,
#Partially deleted in new
chr16	82035640	82071981	chr16:82035640-82071981	0	+	82035640	82071282	789624	3	49,213,1040,	0,32529,35301,
#Partially deleted in new
chr16	82044335	82063222	chr16:82044335-82063222	0	-	82044335	82044335	8553170	3	270,166,130,	0,7957,18757,
#Partially deleted in new
chr16	82056452	82098341	chr16:82056452-82098341	0	+	82068312	82098341	789624	5	61,213,186,138,267,	0,11717,14489,34449,41622,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	82068276	82098534	chr16:82068276-82098534	0	+	82068276	82091176	789624	3	106,186,7633,	0,2665,22625,
#Partially deleted in new
chr16	82120637	82121769	chr16:82120637-82121769	7	-	82120637	82120637	16724991	1	1132,	0,
#Partially deleted in new
chr16	82147797	82170193	chr16:82147797-82170193	0	-	82148730	82164191	789624	7	60,205,95,91,113,90,69,	0,861,1511,3626,16284,16854,22327,
#Partially deleted in new
chr16	82148161	82170226	chr16:82148161-82170226	3	-	82148730	82170175	789624	5	702,95,91,113,102,	0,1147,3262,15920,21963,
#Partially deleted in new
chr16	82148615	82170195	chr16:82148615-82170195	1	-	82148730	82164191	789624	5	248,95,91,80,103,	0,693,2808,15499,21477,
#Partially deleted in new
chr16	82149381	82170215	chr16:82149381-82170215	0	-	82151313	82170175	789624	5	22,115,91,113,91,	0,1856,2042,14700,20743,
#Partially deleted in new
chr16	82151083	82170199	chr16:82151083-82170199	0	-	82151083	82151083	8553170	3	431,113,75,	0,12998,19041,
#Partially deleted in new
chr16	82163875	82170197	chr16:82163875-82170197	1	-	82164077	82170175	789624	2	319,73,	0,6249,
#Partially deleted in new
chr16	82164074	82170218	chr16:82164074-82170218	0	-	82164074	82164074	8553170	3	120,289,94,	0,577,6050,
#Partially deleted in new
chr16	82170295	82175803	chr16:82170295-82175803	3	+	82170295	82170295	8553170	2	52,372,	0,5136,
#Deleted in new
chr16	82192504	82192790	chr16:82192504-82192790	3	-	82192504	82192504	8553170	1	286,	0,
#Deleted in new
chr16	82434827	82435381	chr16:82434827-82435381	7	+	82434827	82434827	16724991	1	554,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	82491737	82575490	chr16:82491737-82575490	3	-	82491737	82491737	8553170	6	247,146,65,156,242,342,	0,5233,5931,18651,83052,83411,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	82495992	82510896	chr16:82495992-82510896	1	-	82495992	82495992	8553170	4	60,149,156,178,	0,1592,14396,14726,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	82510107	82510919	chr16:82510107-82510919	0	-	82510107	82510107	8553170	3	200,156,201,	0,281,611,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	82554048	82575210	chr16:82554048-82575210	0	-	82554048	82554048	8553170	3	200,242,62,	0,20741,21100,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	82626802	83800640	chr16:82626802-83800640	1	+	82627092	83795030	0	14	335,112,209,117,153,145,179,141,183,254,143,234,219,5618,	0,231559,405207,498582,590542,718059,859674,975651,1043987,1051405,1121305,1153165,1156451,1168220,
#Partially deleted in new
chr16	82626964	83795376	chr16:82626964-83795376	3	+	82627057	83795030	0	15	173,106,112,209,117,153,145,179,141,183,254,143,234,219,354,	0,12395,231397,405045,498420,590380,717897,859512,975489,1043825,1051243,1121143,1153003,1156289,1168058,
#Partially deleted in new
chr16	82626965	83032144	chr16:82626965-83032144	0	+	82627092	82884198	789624	5	172,112,80,84,135,	0,231396,257219,257452,405044,
#Partially deleted in new
chr16	82626967	83032059	chr16:82626967-83032059	0	+	82627092	82705220	789624	4	170,213,112,50,	0,78094,231394,405042,
#Partially deleted in new
chr16	82626968	83032121	chr16:82626968-83032121	0	+	82627092	82719430	789624	5	169,114,112,82,112,	0,92393,231393,396044,405041,
#Partially deleted in new
chr16	82626969	83795077	chr16:82626969-83795077	1	+	82627092	83795030	0	13	168,112,209,153,145,179,141,183,254,143,234,219,55,	0,231392,405040,590375,717892,859507,975484,1043820,1051238,1121138,1152998,1156284,1168053,
#Partially deleted in new
chr16	82626969	83181094	chr16:82626969-83181094	1	+	82627092	83180959	0	5	168,112,209,117,225,	0,231392,405040,498415,553900,
#Partially deleted in new
chr16	82626969	83795173	chr16:82626969-83795173	0	+	82627092	83125386	789624	13	168,112,117,153,145,179,141,183,254,143,234,219,151,	0,231392,498415,590375,717892,859507,975484,1043820,1051238,1121138,1152998,1156284,1168053,
#Partially deleted in new
chr16	82626969	83181025	chr16:82626969-83181025	1	+	82627092	83171566	0	6	168,112,209,117,50,154,	0,231392,405040,498415,544552,553902,
#Partially deleted in new
chr16	82626970	83032313	chr16:82626970-83032313	0	+	82626970	82626970	8553170	3	167,112,304,	0,231391,405039,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	82627038	82859718	chr16:82627038-82859718	1	+	82627092	82858520	789624	2	99,1357,	0,231323,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	82627038	82723105	chr16:82627038-82723105	0	+	82627038	82627038	8553170	5	99,147,106,98,85,	0,10582,12321,19196,95982,
#Deleted in new
chr16	82688930	82689019	chr16:82688930-82689019	3	+	82688930	82688930	5263520	1	89,	0,
#Deleted in new
chr16	82727473	82727694	chr16:82727473-82727694	3	+	82727473	82727473	8553170	1	221,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	82773318	82829638	chr16:82773318-82829638	3	+	82773318	82773318	789624	3	171,3492,374,	0,49893,55946,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	82844454	82844757	chr16:82844454-82844757	3	+	82844454	82844454	8553170	1	303,	0,
#Partially deleted in new
chr16	82925957	83486655	chr16:82925957-83486655	0	+	82925957	82925957	8553170	6	74,209,117,153,145,179,	0,106052,199427,291387,418904,560519,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	82953229	82990298	chr16:82953229-82990298	3	-	82953229	82953229	789624	3	1216,104,173,	0,1414,36896,
#Partially deleted in new
chr16	83383006	83397987	chr16:83383006-83397987	0	-	83383006	83383006	8553170	3	194,147,62,	0,14339,14919,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	83383015	83398170	chr16:83383015-83398170	3	-	83383015	83383015	8553170	3	185,133,245,	0,13580,14910,
#Deleted in new
chr16	83508345	83508408	chr16:83508345-83508408	3	+	83508345	83508345	5263520	1	63,	0,
#Partially deleted in new
chr16	83654819	83670881	chr16:83654819-83670881	0	+	83654819	83654819	8553170	2	447,92,	0,15970,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	83721118	83772936	chr16:83721118-83772936	3	-	83721118	83721118	8553170	4	532,114,132,128,	0,4356,7749,51690,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	83721609	83772883	chr16:83721609-83772883	0	-	83721609	83721609	8553170	4	223,114,132,75,	0,3865,7258,51199,
#Deleted in new
chr16	83725675	83726377	chr16:83725675-83726377	3	-	83725675	83725675	8553170	1	702,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	83735277	83740021	chr16:83735277-83740021	1	-	83735277	83735277	8553170	2	641,104,	0,4640,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	83735341	83772917	chr16:83735341-83772917	0	-	83735341	83735341	8553170	2	577,109,	0,37467,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	83789966	83803528	chr16:83789966-83803528	0	-	83789966	83789966	8553170	2	238,94,	0,13468,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	83797235	83803976	chr16:83797235-83803976	1	-	83797235	83797235	789624	3	141,94,308,	0,6199,6433,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	83803456	83806127	chr16:83803456-83806127	1	-	83803456	83803456	8553170	2	72,505,	0,2166,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	83805752	83807834	chr16:83805752-83807834	3	-	83805752	83805752	8553170	2	247,317,	0,1765,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	83807842	83819737	chr16:83807842-83819737	3	+	83808076	83809423	0	4	279,67,121,8317,	0,837,1462,3578,
#Partially deleted in new
chr16	83807988	83818484	chr16:83807988-83818484	1	+	83808076	83809423	0	4	133,67,121,699,	0,691,1316,9797,
#Partially deleted in new
chr16	83808061	83811503	chr16:83808061-83811503	0	+	83808076	83808277	789624	3	685,121,83,	0,1243,3359,
#Partially deleted in new
chr16	83809121	83811667	chr16:83809121-83811667	0	+	83809121	83809121	8553170	2	304,247,	0,2299,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	83899125	83927026	chr16:83899125-83927026	3	+	83899144	83915489	0	5	547,113,157,150,12071,	0,7861,9000,13092,15830,
#Partially deleted in new
chr16	83908131	83951445	chr16:83908131-83951445	3	+	83908131	83951248	789624	4	151,150,104,318,	0,4086,41271,42996,
#Partially deleted in new
chr16	83908174	83951152	chr16:83908174-83951152	0	+	83908174	83949054	789624	5	108,150,71,104,25,	0,4043,40862,41228,42953,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	83911682	83916171	chr16:83911682-83916171	0	+	83911682	83911682	8553170	1	4489,	0,
#Deleted in new
chr16	83929795	83931110	chr16:83929795-83931110	3	-	83929795	83929795	8553170	2	308,80,	0,1235,
#Deleted in new
chr16	83930678	83931223	chr16:83930678-83931223	1	-	83930678	83930678	8553170	2	62,134,	0,411,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	83931345	83934180	chr16:83931345-83934180	0	+	83931345	83931345	8553170	2	73,1936,	0,899,
#Partially deleted in new
chr16	83949066	83966332	chr16:83949066-83966332	1	+	83949449	83966007	789624	7	440,160,99,137,192,92,1271,	0,2061,8573,10193,11502,11914,15995,
#Partially deleted in new
chr16	83949066	83966331	chr16:83949066-83966331	3	+	83957671	83966007	789624	6	440,99,137,192,92,1270,	0,8573,10193,11502,11914,15995,
#Partially deleted in new
chr16	83953221	83966332	chr16:83953221-83966332	1	+	83957671	83966007	789624	6	149,99,137,192,92,1271,	0,4418,6038,7347,7759,11840,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	83953238	83961253	chr16:83953238-83961253	1	+	83957671	83961076	789624	5	132,99,137,192,273,	0,4401,6021,7330,7742,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	83953239	83954548	chr16:83953239-83954548	0	+	83953239	83953239	8553170	2	131,436,	0,873,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	83956987	83960732	chr16:83956987-83960732	0	+	83957671	83960732	789624	4	134,99,137,164,	0,652,2272,3581,
#Partially deleted in new
chr16	83968631	84002776	chr16:83968631-84002776	3	+	83968648	84002346	789624	13	218,25,109,26,98,137,119,80,54,113,78,92,459,	0,3519,9812,12207,12398,21862,25670,25977,28584,29573,32092,33193,33686,
#Partially deleted in new
chr16	83971450	84002776	chr16:83971450-84002776	1	+	83972172	84002346	789624	11	725,109,98,137,119,80,54,113,78,92,459,	0,6993,9579,19043,22851,23158,25765,26754,29273,30374,30867,
#Partially deleted in new
chr16	83978544	83998285	chr16:83978544-83998285	0	+	83978544	83998285	789624	7	8,26,98,137,119,80,81,	0,2294,2485,11949,15757,16064,19660,
#Partially deleted in new
chr16	83993402	83998298	chr16:83993402-83998298	0	+	83993402	83993402	8553170	5	212,119,80,54,94,	0,899,1206,3813,4802,
#Partially deleted in new
chr16	83998251	84002776	chr16:83998251-84002776	0	+	83998251	84002346	789624	3	66,92,459,	0,3573,4066,
#Partially deleted in new
chr16	84009666	84016756	chr16:84009666-84016756	0	-	84009666	84009666	8553170	3	211,52,238,	0,3334,6852,
#Partially deleted in new
chr16	84009783	84042157	chr16:84009783-84042157	3	-	84009783	84042157	789624	10	94,52,209,148,115,58,102,142,199,189,	0,3217,6735,7356,12991,19710,22083,23544,26918,32185,
#Partially deleted in new
chr16	84022793	84042636	chr16:84022793-84042636	0	-	84022793	84042157	789624	7	96,58,102,142,199,191,73,	0,6700,9073,10534,13908,19175,19770,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	84033380	84041356	chr16:84033380-84041356	0	-	84033380	84036750	789624	3	89,199,290,	0,3321,7686,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	84039917	84040033	chr16:84039917-84040033	7	-	84039917	84039917	16724991	1	116,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	84040789	84045333	chr16:84040789-84045333	3	+	84040789	84040789	8553170	2	1320,864,	0,3680,
#Deleted in new
chr16	84053760	84058044	chr16:84053760-84058044	0	-	84053760	84053760	8553170	2	885,2040,	0,2244,
#Partially deleted in new
chr16	84053765	84116906	chr16:84053765-84116906	3	-	84054448	84101783	789624	23	880,131,127,132,141,78,125,157,116,173,189,145,162,152,103,68,117,110,111,204,258,487,172,	0,2239,5536,6916,9539,11924,12723,13901,14573,16100,16822,20831,27981,31217,33592,37109,37966,39422,39945,41836,45287,47855,62969,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	84053765	84075433	chr16:84053765-84075433	0	-	84053765	84053765	8553170	12	880,131,127,132,141,78,125,157,116,173,189,837,	0,2239,5536,6916,9539,11924,12723,13901,14573,16100,16822,20831,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	84053773	84061631	chr16:84053773-84061631	0	-	84053773	84053773	8553170	3	872,131,2330,	0,2231,5528,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	84059301	84061148	chr16:84059301-84061148	0	-	84059301	84059301	8553170	2	127,467,	0,1380,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	84059302	84061217	chr16:84059302-84061217	0	-	84059302	84059302	8553170	2	172,536,	0,1379,
#Deleted in new
chr16	84070018	84072137	chr16:84070018-84072137	0	-	84070018	84070018	8553170	3	20,189,334,	0,569,1785,
#Partially deleted in new
chr16	84070597	84082169	chr16:84070597-84082169	0	-	84070597	84070597	8553170	2	179,423,	0,11149,
#Partially deleted in new
chr16	84070714	84093286	chr16:84070714-84093286	0	-	84070714	84070714	8553170	7	62,162,152,103,68,117,99,	0,11032,14268,16643,20160,21017,22473,
#Partially deleted in new
chr16	84070763	84091786	chr16:84070763-84091786	0	-	84081890	84091786	789624	6	13,145,162,103,68,55,	0,3833,10983,16594,20111,20968,
#Partially deleted in new
chr16	84075522	84090920	chr16:84075522-84090920	0	-	84075522	84075522	8553170	5	134,162,152,103,46,	0,6224,9460,11835,15352,
#Partially deleted in new
chr16	84081521	84085026	chr16:84081521-84085026	0	-	84081547	84085026	789624	2	387,44,	0,3461,
#Partially deleted in new
chr16	84085053	84116795	chr16:84085053-84116795	0	-	84085053	84093256	789624	7	81,103,68,117,110,42,61,	0,2304,5821,6678,8134,17012,31681,
#Deleted in new
chr16	84085978	84086590	chr16:84085978-84086590	3	-	84085978	84085978	8553170	1	612,	0,
#Partially deleted in new
chr16	84101734	84116835	chr16:84101734-84116835	0	-	84101734	84101783	789624	3	373,113,101,	0,8978,15000,
#Partially deleted in new
chr16	84101800	84116835	chr16:84101800-84116835	0	-	84101800	84101800	8553170	3	307,141,101,	0,8912,14934,
#Deleted in new
chr16	84117050	84117571	chr16:84117050-84117571	3	+	84117050	84117050	8553170	1	521,	0,
#Partially deleted in new
chr16	84119292	84121153	chr16:84119292-84121153	7	+	84119292	84119292	16724991	2	951,64,	0,1797,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	84122145	84125204	chr16:84122145-84125204	0	-	84122145	84122145	8553170	1	3059,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	84122280	84145188	chr16:84122280-84145188	3	-	84124629	84131321	789624	6	2448,228,446,226,62,109,	0,7267,7705,8821,13263,22799,
#Partially deleted in new
chr16	84122677	84123344	chr16:84122677-84123344	0	-	84122677	84122677	8553170	2	161,372,	0,295,
#Partially deleted in new
chr16	84124122	84145169	chr16:84124122-84145169	1	-	84124629	84131321	789624	7	606,228,186,95,226,62,90,	0,5425,5863,6214,6979,11421,20957,
#Partially deleted in new
chr16	84130318	84144438	chr16:84130318-84144438	0	-	84130318	84131321	789624	4	113,226,62,148,	0,783,5225,13972,
#Partially deleted in new
chr16	84130327	84145156	chr16:84130327-84145156	0	-	84130327	84131321	789624	4	104,226,50,77,	0,774,5216,14752,
#Partially deleted in new
chr16	84130960	84145192	chr16:84130960-84145192	0	-	84130960	84130960	8553170	3	367,62,113,	0,4583,14119,
#Partially deleted in new
chr16	84131110	84145175	chr16:84131110-84145175	0	-	84131110	84131321	789624	4	217,62,84,96,	0,4433,8112,13969,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	84145286	84177918	chr16:84145286-84177918	0	+	84145286	84145286	8553170	11	278,136,92,222,167,122,167,498,2469,367,190,	0,3720,4964,9290,10296,14388,20496,24572,26973,30646,32442,
#Partially deleted in new
chr16	84145309	84174847	chr16:84145309-84174847	0	+	84145440	84170273	789624	11	255,136,92,222,167,122,167,195,115,116,179,	0,3697,4941,9267,10273,14365,20473,24549,24932,26950,29359,
#Partially deleted in new
chr16	84145309	84159748	chr16:84145309-84159748	0	+	84145440	84159151	789624	7	255,136,92,222,167,63,74,	0,3697,4941,9267,10273,13839,14365,
#Partially deleted in new
chr16	84145316	84177918	chr16:84145316-84177918	3	+	84145440	84177841	789624	12	248,136,92,222,167,122,167,498,116,54,367,190,	0,3690,4934,9260,10266,14358,20466,24542,26943,29352,30616,32412,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	84158841	84177917	chr16:84158841-84177917	0	+	84158841	84158841	8553170	8	370,122,215,498,116,54,367,189,	0,833,6941,11017,13418,15827,17091,18887,
#Partially deleted in new
chr16	84159081	84169976	chr16:84159081-84169976	0	+	84159081	84159081	8553170	5	130,122,26,167,118,	0,593,3108,6701,10777,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	84175227	84177916	chr16:84175227-84177916	0	+	84175227	84175227	8553170	1	2689,	0,
#Partially deleted in new
chr16	84175762	84177918	chr16:84175762-84177918	0	+	84175762	84175762	8553170	2	537,190,	0,1966,
#Partially deleted in new
chr16	84176140	84178767	chr16:84176140-84178767	0	+	84176140	84178406	789624	2	159,378,	0,2249,
#Partially deleted in new
chr16	84177846	84187070	chr16:84177846-84187070	1	-	84178940	84181783	789624	12	2005,138,175,144,136,72,118,117,239,90,98,170,	0,2099,2323,3196,3481,3745,3899,4095,4355,5397,5563,9054,
#Partially deleted in new
chr16	84177851	84187049	chr16:84177851-84187049	1	-	84178940	84183715	789624	15	2000,135,175,144,136,72,118,117,239,74,90,98,82,49,149,	0,2094,2318,3191,3476,3740,3894,4090,4350,5224,5392,5558,5845,6999,9049,
#Partially deleted in new
chr16	84177853	84187052	chr16:84177853-84187052	0	-	84177853	84177853	8553170	14	1998,138,175,144,336,118,117,239,74,90,98,82,49,152,	0,2092,2316,3189,3474,3892,4088,4348,5222,5390,5556,5843,6997,9047,
#Partially deleted in new
chr16	84177853	84187020	chr16:84177853-84187020	0	-	84177853	84177853	8553170	13	1998,138,1017,336,118,117,239,74,90,98,82,210,120,	0,2092,2316,3474,3892,4088,4348,5222,5390,5556,5843,6997,9047,
#Partially deleted in new
chr16	84177854	84187011	chr16:84177854-84187011	3	-	84178940	84184988	789624	14	1997,138,175,144,136,72,313,239,74,90,98,82,210,111,	0,2091,2315,3188,3473,3737,3891,4347,5221,5389,5555,5842,6996,9046,
#Partially deleted in new
chr16	84177876	84186981	chr16:84177876-84186981	0	-	84182296	84184988	789624	12	1409,34,72,118,117,239,78,90,98,82,210,81,	0,3553,3715,3869,4065,4325,5195,5367,5533,5820,6974,9024,
#Partially deleted in new
chr16	84178711	84187039	chr16:84178711-84187039	1	-	84178940	84184988	789624	15	1140,138,175,144,136,72,118,117,239,74,90,98,82,210,139,	0,1234,1458,2331,2616,2880,3034,3230,3490,4364,4532,4698,4985,6139,8189,
#Partially deleted in new
chr16	84178748	84187039	chr16:84178748-84187039	0	-	84178748	84178748	8553170	12	1103,135,175,128,336,118,117,239,74,85,98,139,	0,1197,1421,2119,2579,2997,3193,3453,4327,4495,4661,8152,
#Partially deleted in new
chr16	84178780	84187033	chr16:84178780-84187033	0	-	84182296	84183276	789624	12	1071,138,175,144,136,72,118,117,239,90,98,133,	0,1165,1389,2262,2547,2811,2965,3161,3421,4463,4629,8120,
#Partially deleted in new
chr16	84178847	84187057	chr16:84178847-84187057	1	-	84178940	84181783	789624	11	1004,138,175,144,136,72,118,117,239,49,157,	0,1098,1322,2195,2480,2744,2898,3094,3354,6003,8053,
#Deleted in new
chr16	84179121	84181418	chr16:84179121-84181418	0	-	84179121	84181418	789624	4	730,175,144,91,	0,1048,1921,2206,
#Deleted in new
chr16	84181289	84181758	chr16:84181289-84181758	0	-	84181289	84181289	8553170	3	174,72,13,	0,302,456,
#Deleted in new
chr16	84181369	84182176	chr16:84181369-84182176	0	-	84181369	84181369	8553170	3	94,72,431,	0,222,376,
#Partially deleted in new
chr16	84181495	84186989	chr16:84181495-84186989	0	-	84181495	84181495	8553170	11	168,118,117,239,74,90,98,82,139,104,89,	0,250,446,706,1580,1748,1914,2201,3355,3984,5405,
#Deleted in new
chr16	84182031	84185052	chr16:84182031-84185052	0	-	84182031	84182031	8553170	5	409,253,98,82,202,	0,1044,1378,1665,2819,
#Partially deleted in new
chr16	84182146	84187038	chr16:84182146-84187038	0	-	84182146	84182146	8553170	6	294,90,98,82,210,138,	0,1097,1263,1550,2704,4754,
#Partially deleted in new
chr16	84182266	84187039	chr16:84182266-84187039	0	-	84182266	84183276	789624	5	174,74,85,98,139,	0,809,977,1143,4634,
#Partially deleted in new
chr16	84182335	84187020	chr16:84182335-84187020	0	-	84183138	84183715	789624	6	105,74,85,98,82,120,	0,740,908,1074,1361,4565,
#Partially deleted in new
chr16	84183119	84187063	chr16:84183119-84187063	0	-	84183119	84184988	789624	6	30,90,98,82,139,163,	0,124,290,577,1731,3781,
#Partially deleted in new
chr16	84183137	84187045	chr16:84183137-84187045	0	-	84183486	84184988	789624	5	12,90,98,210,145,	0,106,272,1713,3763,
#Partially deleted in new
chr16	84183266	84187045	chr16:84183266-84187045	0	-	84183266	84184988	789624	5	67,122,82,139,145,	0,143,430,1584,3634,
#Deleted in new
chr16	84183272	84183751	chr16:84183272-84183751	0	-	84183272	84183272	8553170	2	235,55,	0,424,
#Partially deleted in new
chr16	84185157	84187052	chr16:84185157-84187052	0	-	84185157	84185157	8553170	2	426,152,	0,1743,
#Partially deleted in new
chr16	84191137	84197166	chr16:84191137-84197166	3	+	84191230	84196974	789624	11	511,216,141,48,126,181,168,230,244,121,297,	0,2868,3304,3795,3931,4128,4392,4677,4989,5509,5732,
#Partially deleted in new
chr16	84191178	84197165	chr16:84191178-84197165	1	+	84191230	84196974	789624	10	470,141,48,126,151,168,230,244,121,296,	0,3263,3754,3890,4117,4351,4636,4948,5468,5691,
#Deleted in new
chr16	84191190	84191874	chr16:84191190-84191874	0	+	84191190	84191190	8553170	2	458,113,	0,571,
#Partially deleted in new
chr16	84191456	84195837	chr16:84191456-84195837	0	+	84191456	84195837	789624	6	192,141,126,151,168,23,	0,2985,3612,3839,4073,4358,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	84192557	84197053	chr16:84192557-84197053	0	-	84192557	84192557	8553170	3	1749,768,172,	0,1831,4324,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	84192557	84197053	chr16:84192557-84197053	3	-	84192557	84192557	789624	5	1749,337,112,181,172,	0,1831,2487,2703,4324,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	84192975	84197166	chr16:84192975-84197166	0	+	84192975	84192975	8553170	9	1246,141,48,126,151,168,244,121,297,	0,1466,1957,2093,2320,2554,3151,3671,3894,
#Deleted in new
chr16	84193723	84197166	chr16:84193723-84197166	0	+	84193723	84193723	8553170	8	1257,90,151,168,230,244,121,297,	0,1345,1572,1806,2091,2403,2923,3146,
#Deleted in new
chr16	84194174	84194947	chr16:84194174-84194947	0	+	84194174	84194174	8553170	2	47,506,	0,267,
#Deleted in new
chr16	84194176	84194714	chr16:84194176-84194714	0	-	84194176	84194176	8553170	2	127,326,	0,212,
#Deleted in new
chr16	84194358	84195438	chr16:84194358-84195438	0	+	84194358	84194358	8553170	4	224,48,126,173,	0,574,710,907,
#Deleted in new
chr16	84194933	84197052	chr16:84194933-84197052	0	-	84194933	84194933	8553170	3	223,181,171,	0,327,1948,
#Deleted in new
chr16	84196533	84197168	chr16:84196533-84197168	0	+	84196533	84196533	8553170	2	234,299,	0,336,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	84218666	84239698	chr16:84218666-84239698	3	-	84222216	84237485	789624	3	4354,796,29,	0,18063,21003,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	84235407	84239750	chr16:84235407-84239750	1	-	84236714	84237485	789624	2	2118,81,	0,4262,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	84262814	84262928	chr16:84262814-84262928	7	-	84262814	84262814	16724991	1	114,	0,
#Partially deleted in new
chr16	84294645	84329851	chr16:84294645-84329851	3	+	84294971	84326940	789624	7	470,193,84,141,42,74,530,	0,18315,23626,24785,29773,32236,34676,
#Partially deleted in new
chr16	84294845	84329840	chr16:84294845-84329840	1	+	84294971	84326940	789624	7	270,193,84,141,42,74,515,	0,18115,23426,24585,29573,32036,34480,
#Deleted in new
chr16	84294943	84295492	chr16:84294943-84295492	1	+	84294971	84295172	789624	1	549,	0,
#Deleted in new
chr16	84295497	84296985	chr16:84295497-84296985	3	-	84295497	84295497	8553170	2	327,89,	0,1399,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	84316056	84329842	chr16:84316056-84329842	0	+	84316056	84316056	8553170	4	3515,42,74,517,	0,8362,10825,13269,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	84325663	84329840	chr16:84325663-84329840	0	+	84325663	84325663	8553170	1	4177,	0,
#Partially deleted in new
chr16	84342463	84343407	chr16:84342463-84343407	3	-	84342463	84342463	8553170	2	132,337,	0,607,
#Partially deleted in new
chr16	84368526	84464178	chr16:84368526-84464178	3	+	84368615	84463732	789624	27	188,111,117,90,36,62,109,150,69,76,67,125,98,102,90,102,157,171,98,51,167,69,117,148,99,142,565,	0,29972,36601,39878,42041,42177,46956,53863,54102,54661,57208,70639,70900,72330,73983,77802,80006,83394,84611,84794,86291,90593,90743,92127,93187,93461,95087,
#Partially deleted in new
chr16	84368526	84464187	chr16:84368526-84464187	1	+	84368615	84463732	789624	28	188,111,117,90,36,62,109,150,69,76,67,125,98,102,90,102,157,171,98,51,167,69,117,87,148,99,142,574,	0,29972,36601,39878,42041,42177,46956,53863,54102,54661,57208,70639,70900,72330,73983,77802,80006,83394,84611,84794,86291,90593,90743,90979,92127,93187,93461,95087,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr16	84404426	84464000	chr16:84404426-84464000	0	+	84404426	84404426	8553170	25	818,90,36,62,109,150,69,76,67,125,98,102,90,102,157,171,98,51,167,69,117,148,99,142,387,	0,3978,6141,6277,11056,17963,18202,18761,21308,34739,35000,36430,38083,41902,44106,47494,48711,48894,50391,54693,54843,56227,57287,57561,59187,
#Partially deleted in new
chr16	84405219	84422398	chr16:84405219-84422398	0	+	84405219	84410688	789624	6	25,90,36,86,109,9,	0,3185,5348,5460,10263,17170,
#Partially deleted in new
chr16	84406587	84464000	chr16:84406587-84464000	0	+	84406587	84406587	8553170	24	62,90,36,109,150,69,76,67,125,98,102,90,102,157,171,98,51,167,69,117,148,99,142,387,	0,1817,3980,8895,15802,16041,16600,19147,32578,32839,34269,35922,39741,41945,45333,46550,46733,48230,52532,52682,54066,55126,55400,57026,
#Partially deleted in new
chr16	84406587	84422534	chr16:84406587-84422534	0	+	84406587	84406587	8553170	6	62,90,36,62,109,145,	0,1817,3980,4116,8895,15802,
#Partially deleted in new
chr16	84406611	84415526	chr16:84406611-84415526	0	+	84406611	84406611	8553170	6	38,278,90,36,62,44,	0,575,1793,3956,4092,8871,
#Partially deleted in new
chr16	84408437	84410907	chr16:84408437-84410907	0	+	84408437	84408437	8553170	2	57,340,	0,2130,
#Partially deleted in new
chr16	84422426	84426051	chr16:84422426-84426051	0	+	84422426	84422426	8553170	4	113,69,76,317,	0,202,761,3308,
#Partially deleted in new
chr16	84439038	84440892	chr16:84439038-84440892	0	+	84439038	84439038	8553170	3	252,98,36,	0,388,1818,
#Partially deleted in new
chr16	84453235	84463730	chr16:84453235-84463730	0	+	84453235	84453235	8553170	7	136,167,69,148,99,142,117,	0,1582,5884,7418,8478,8752,10378,
#Partially deleted in new
chr16	84459258	84467361	chr16:84459258-84467361	3	-	84459258	84459258	789624	3	1635,1305,58,	0,2436,8045,
#Deleted in new
chr16	84459605	84464179	chr16:84459605-84464179	0	+	84459605	84459605	8553170	4	1196,99,142,566,	0,2108,2382,4008,
#Deleted in new
chr16	84460287	84461778	chr16:84460287-84461778	0	+	84460287	84460287	8553170	1	1491,	0,
#Deleted in new
chr16	84460693	84462086	chr16:84460693-84462086	0	+	84460693	84460693	8553170	2	108,373,	0,1020,
#Deleted in new
chr16	84460762	84461602	chr16:84460762-84461602	0	+	84460762	84460762	8553170	2	39,253,	0,587,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	84476420	84504758	chr16:84476420-84504758	1	-	84479912	84498086	789624	8	3606,180,119,429,145,231,178,158,	0,4108,6171,10210,12857,19262,21513,28180,
#Partially deleted in new
chr16	84479696	84504647	chr16:84479696-84504647	0	-	84487002	84498086	789624	9	330,180,119,421,149,231,178,190,47,	0,832,2895,6934,9577,15986,18237,24261,24904,
#Partially deleted in new
chr16	84479790	84504690	chr16:84479790-84504690	0	-	84497626	84498086	789624	9	236,180,119,429,145,231,229,178,90,	0,738,2801,6840,9487,15892,17628,18143,24810,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	84486003	84488436	chr16:84486003-84488436	0	-	84486003	84486003	8553170	1	2433,	0,
#Partially deleted in new
chr16	84489362	84554033	chr16:84489362-84554033	2	-	84489362	84498086	789624	4	60,231,178,88,	0,6320,8571,64583,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	84495598	84497495	chr16:84495598-84497495	3	+	84495598	84495598	8553170	2	177,419,	0,1478,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	84495817	84504621	chr16:84495817-84504621	0	-	84495817	84498086	789624	5	96,178,120,142,21,	0,2116,4098,6903,8783,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	84497703	84504629	chr16:84497703-84504629	0	-	84497703	84497703	8553170	2	408,29,	0,6897,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	84497950	84504659	chr16:84497950-84504659	0	-	84497950	84498086	789624	4	161,142,190,59,	0,4770,6007,6650,
#Partially deleted in new
chr16	84565593	84618077	chr16:84565593-84618077	3	-	84566844	84617914	0	4	1362,158,83,240,	0,24511,51907,52244,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	84565601	84577096	chr16:84565601-84577096	0	-	84565601	84565601	8553170	2	3526,1804,	0,9691,
#Partially deleted in new
chr16	84565658	84618059	chr16:84565658-84618059	1	-	84566844	84590215	789624	3	1297,158,222,	0,24446,52179,
#Partially deleted in new
chr16	84566549	84590479	chr16:84566549-84590479	0	-	84566549	84566549	8553170	2	406,375,	0,23555,
#Partially deleted in new
chr16	84590124	84618075	chr16:84590124-84618075	0	-	84590124	84590124	8553170	2	138,575,	0,27376,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	84594392	84596826	chr16:84594392-84596826	3	+	84594392	84594392	8553170	1	2434,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	84616003	84617559	chr16:84616003-84617559	0	-	84616389	84617559	789624	2	472,59,	0,1497,
#Partially deleted in new
chr16	84648524	84662314	chr16:84648524-84662314	3	+	84650867	84662133	789624	5	125,79,1074,158,737,	0,2327,8346,11235,13053,
#Partially deleted in new
chr16	84648534	84662314	chr16:84648534-84662314	1	+	84650867	84662133	789624	4	115,79,1043,737,	0,2317,8336,13043,
#Partially deleted in new
chr16	84648611	84657100	chr16:84648611-84657100	0	+	84650867	84657100	789624	3	276,79,230,	0,2240,8259,
#Partially deleted in new
chr16	84648921	84657154	chr16:84648921-84657154	0	+	84650867	84657154	789624	3	145,79,284,	0,1930,7949,
#Partially deleted in new
chr16	84648965	84656993	chr16:84648965-84656993	0	+	84650867	84656993	789624	3	353,79,123,	0,1886,7905,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	84657902	84662309	chr16:84657902-84662309	0	+	84657902	84657902	8553170	3	1728,158,732,	0,1857,3675,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	84659538	84667686	chr16:84659538-84667686	0	+	84659538	84659538	8553170	2	379,6109,	0,2039,
#Partially deleted in new
chr16	84699977	84779581	chr16:84699977-84779581	3	+	84700090	84779082	789624	14	134,69,61,1041,92,110,56,104,100,178,166,145,66,687,	0,33457,40331,44655,58738,59385,59913,60194,63011,64108,68215,72563,75182,78917,
#Partially deleted in new
chr16	84699985	84745211	chr16:84699985-84745211	0	+	84699985	84699985	8553170	5	126,53,69,61,579,	0,33067,33449,40323,44647,
#Partially deleted in new
chr16	84699994	84779922	chr16:84699994-84779922	0	+	84700090	84744731	789624	11	117,69,1041,56,104,100,178,166,145,66,1028,	0,33440,44638,59896,60177,62994,64091,68198,72546,75165,78900,
#Partially deleted in new
chr16	84699994	84740312	chr16:84699994-84740312	0	+	84699994	84699994	8553170	4	117,64,69,4,	0,16200,33440,40314,
#Partially deleted in new
chr16	84699994	84760236	chr16:84699994-84760236	0	+	84700090	84760236	789624	7	117,69,61,92,110,56,65,	0,33440,40314,58721,59368,59896,60177,
#Partially deleted in new
chr16	84699994	84733061	chr16:84699994-84733061	0	+	84699994	84699994	8553170	4	117,121,324,9,	0,4745,16200,33058,
#Partially deleted in new
chr16	84700001	84709322	chr16:84700001-84709322	0	+	84700001	84700001	8553170	2	110,451,	0,8870,
#Partially deleted in new
chr16	84700003	84744923	chr16:84700003-84744923	0	+	84733089	84744923	789624	5	108,53,56,61,291,	0,33049,33444,40305,44629,
#Partially deleted in new
chr16	84700003	84779015	chr16:84700003-84779015	0	+	84700090	84758733	789624	12	108,69,92,110,56,104,100,178,166,145,66,121,	0,33431,58712,59359,59887,60168,62985,64082,68189,72537,75156,78891,
#Partially deleted in new
chr16	84700003	84779194	chr16:84700003-84779194	1	+	84704827	84779082	789624	15	108,121,69,61,1041,92,110,56,104,100,178,166,145,66,300,	0,4736,33431,40305,44629,58712,59359,59887,60168,62985,64082,68189,72537,75156,78891,
#Partially deleted in new
chr16	84700028	84768270	chr16:84700028-84768270	0	+	84733075	84768270	789624	10	83,29,61,92,110,56,104,100,63,32,	0,33024,45584,58687,59334,59862,60143,62960,64057,68210,
#Partially deleted in new
chr16	84700039	84768275	chr16:84700039-84768275	0	+	84700090	84768275	789624	5	72,69,100,178,83,	0,33395,62949,64046,68153,
#Partially deleted in new
chr16	84733137	84744780	chr16:84733137-84744780	0	+	84733137	84733137	8553170	3	366,61,148,	0,7171,11495,
#Partially deleted in new
chr16	84733208	84744911	chr16:84733208-84744911	0	+	84733208	84733208	8553170	2	295,279,	0,11424,
#Partially deleted in new
chr16	84759277	84764170	chr16:84759277-84764170	0	+	84759277	84759277	8553170	5	195,56,104,100,85,	0,613,894,3711,4808,
#Partially deleted in new
chr16	84759835	84763013	chr16:84759835-84763013	0	+	84759835	84759835	8553170	2	440,25,	0,3153,
#Partially deleted in new
chr16	84768264	84779306	chr16:84768264-84779306	0	+	84768264	84778963	789624	3	94,66,412,	0,6895,10630,
#Partially deleted in new
chr16	84768266	84778987	chr16:84768266-84778987	0	+	84768266	84778987	789624	3	92,145,93,	0,4274,10628,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	84819983	84909510	chr16:84819983-84909510	3	+	84838495	84906642	789624	15	150,314,119,133,116,101,144,61,67,131,44,73,76,134,2923,	0,18438,25802,29401,30584,34745,46913,48867,52458,53008,53936,57454,60525,69246,86604,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	84819984	84838551	chr16:84819984-84838551	0	+	84838495	84838551	789624	3	149,259,130,	0,16192,18437,
#Partially deleted in new
chr16	84819990	84907112	chr16:84819990-84907112	1	+	84838495	84906642	789624	15	143,314,119,133,116,101,141,61,67,131,44,73,76,134,525,	0,18431,25795,29394,30577,34738,46909,48860,52451,53001,53929,57447,60518,69239,86597,
#Partially deleted in new
chr16	84819991	84863166	chr16:84819991-84863166	0	+	84819991	84819991	8553170	7	142,314,119,133,116,101,158,	0,18430,25794,29393,30576,34737,43017,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	84819996	84840023	chr16:84819996-84840023	0	+	84819996	84819996	8553170	2	137,1602,	0,18425,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	84820002	84880725	chr16:84820002-84880725	1	+	84838495	84880629	789624	13	131,314,119,133,116,101,144,61,67,131,44,73,217,	0,18419,25783,29382,30565,34726,46894,48848,52439,52989,53917,57435,60506,
#Partially deleted in new
chr16	84820004	84846150	chr16:84820004-84846150	1	+	84838495	84845908	789624	3	129,314,365,	0,18417,25781,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	84820016	84873508	chr16:84820016-84873508	0	+	84820016	84820016	8553170	10	117,314,119,133,116,101,144,61,67,517,	0,18405,25769,29368,30551,34712,46880,48834,52425,52975,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	84828262	84829242	chr16:84828262-84829242	3	+	84828262	84828262	8553170	2	28,232,	0,748,
#Partially deleted in new
chr16	84842002	84873110	chr16:84842002-84873110	0	+	84849496	84873110	789624	9	263,119,133,116,101,144,61,67,119,	0,3783,7382,8565,12726,24894,26848,30439,30989,
#Partially deleted in new
chr16	84849216	84866993	chr16:84849216-84866993	0	+	84849496	84866993	789624	4	301,116,101,97,	0,1351,5512,17680,
#Partially deleted in new
chr16	84889243	84920768	chr16:84889243-84920768	0	+	84889243	84919649	789624	3	120,98,372,	0,30396,31153,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	84917376	84924808	chr16:84917376-84924808	3	-	84917376	84917376	8553170	3	2827,90,152,	0,6166,7280,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	84928352	84939603	chr16:84928352-84939603	3	+	84928352	84928352	8553170	3	253,122,223,	0,9582,11028,
#Partially deleted in new
chr16	84974180	85011535	chr16:84974180-85011535	3	-	84976342	84990618	789624	8	2339,131,82,97,125,332,86,250,	0,2914,3743,5008,7689,16123,21741,37105,
#Partially deleted in new
chr16	84974459	85011522	chr16:84974459-85011522	0	-	84976342	84990618	789624	10	419,1107,131,82,97,125,111,332,86,237,	0,953,2635,3464,4729,7410,14303,15844,21462,36826,
#Deleted in new
chr16	84976103	84977281	chr16:84976103-84977281	0	-	84976103	84976103	8553170	2	416,187,	0,991,
#Partially deleted in new
chr16	84976212	85011502	chr16:84976212-85011502	1	-	84976342	84990618	789624	9	307,131,82,97,125,111,332,86,217,	0,882,1711,2976,5657,12550,14091,19709,35073,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	84976245	84978126	chr16:84976245-84978126	0	-	84976245	84976245	8553170	3	274,131,203,	0,849,1678,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	84976495	84982117	chr16:84976495-84982117	0	-	84976495	84981958	789624	5	24,131,82,97,248,	0,599,1428,2693,5374,
#Partially deleted in new
chr16	84977107	84990626	chr16:84977107-84990626	0	-	84977107	84977107	8553170	4	118,82,97,323,	0,816,2081,13196,
#Partially deleted in new
chr16	84990332	85005010	chr16:84990332-85005010	0	-	84990332	84990618	789624	3	303,86,94,	0,5589,14584,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	85027750	85094220	chr16:85027750-85094220	1	+	85067071	85088325	789624	13	101,501,100,74,71,208,41,79,78,30,81,95,5945,	0,39149,44032,45174,48093,49674,50664,51174,53564,54813,58893,59321,60525,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	85027750	85094220	chr16:85027750-85094220	3	+	85067071	85088325	789624	12	108,501,100,74,71,208,41,79,78,81,95,5945,	0,39149,44032,45174,48093,49674,50664,51174,53564,58893,59321,60525,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	85063211	85094230	chr16:85063211-85094230	1	+	85067071	85088325	789624	13	459,501,100,74,71,208,41,79,78,30,81,95,5955,	0,3688,8571,9713,12632,14213,15203,15713,18103,19352,23432,23860,25064,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	85066851	85079754	chr16:85066851-85079754	1	+	85067071	85079007	789624	7	549,100,74,71,208,41,830,	0,4931,6073,8992,10573,11563,12073,
#Partially deleted in new
chr16	85077459	85088403	chr16:85077459-85088403	0	+	85077459	85088325	789624	7	173,41,79,78,81,95,128,	0,955,1465,3855,9184,9612,10816,
#Partially deleted in new
chr16	85078418	85088347	chr16:85078418-85088347	0	+	85078418	85088325	789624	5	37,79,81,95,72,	0,506,8225,8653,9857,
#Deleted in new
chr16	85086913	85088755	chr16:85086913-85088755	0	+	85086913	85086913	8553170	2	253,480,	0,1362,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	85098357	85112508	chr16:85098357-85112508	3	-	85099184	85112352	789624	9	989,102,114,105,6,102,69,235,176,	0,1781,3856,6969,9309,9488,9673,11868,13975,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	85098369	85108071	chr16:85098369-85108071	0	-	85098534	85108071	789624	7	312,102,114,105,6,102,41,	0,1769,3844,6957,9297,9476,9661,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	85099126	85112390	chr16:85099126-85112390	1	-	85099184	85112352	789624	8	220,102,114,111,102,69,235,58,	0,1012,3087,6200,8719,8904,11099,13206,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	85137149	85149443	chr16:85137149-85149443	3	+	85137149	85137149	789624	3	60,124,1821,	0,6668,10473,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	85142695	85146001	chr16:85142695-85146001	3	-	85142695	85142695	8553170	1	3306,	0,
#Partially deleted in new
chr16	85169524	85634132	chr16:85169524-85634132	0	+	85169524	85634132	789624	3	2283,181,219,	0,187938,464389,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	85171275	85185363	chr16:85171275-85185363	0	+	85171275	85171275	8553170	2	532,245,	0,13843,
#Deleted in new
chr16	85278819	85279035	chr16:85278819-85279035	7	-	85278819	85278819	16724991	1	216,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	85282957	85285963	chr16:85282957-85285963	3	+	85282957	85282957	8553170	2	600,966,	0,2040,
#Deleted in new
chr16	85306225	85306325	chr16:85306225-85306325	3	-	85306225	85306225	5263520	1	100,	0,
#Partially deleted in new
chr16	85357462	85359449	chr16:85357462-85359449	0	+	85357462	85357462	8553170	2	181,108,	0,1879,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	85489812	85490831	chr16:85489812-85490831	3	+	85489812	85489812	8553170	1	1019,	0,
#Partially deleted in new
chr16	85555966	85654346	chr16:85555966-85654346	0	+	85556326	85654346	789624	3	397,200,69,	0,92585,98311,
#Partially deleted in new
chr16	85580008	85583571	chr16:85580008-85583571	3	-	85580008	85580008	8553170	3	221,151,229,	0,2010,3334,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	85592265	85595720	chr16:85592265-85595720	3	+	85592265	85592265	8553170	1	3455,	0,
#Partially deleted in new
chr16	85611408	85673354	chr16:85611408-85673354	1	+	85648637	85672539	789624	15	123,200,173,198,192,323,328,620,113,271,114,372,285,104,950,	0,37143,42869,43385,44317,44934,45868,49737,51572,51935,53606,54567,56731,59586,60996,
#Partially deleted in new
chr16	85613156	85655872	chr16:85613156-85655872	0	+	85648637	85655872	789624	5	154,200,173,198,147,	0,35395,41121,41637,42569,
#Partially deleted in new
chr16	85613215	85676204	chr16:85613215-85676204	3	+	85613391	85672539	789624	16	183,219,200,173,198,192,323,328,620,113,271,114,372,285,104,3800,	0,20698,35336,41062,41578,42510,43127,44061,47930,49765,50128,51799,52760,54924,57779,59189,
#Partially deleted in new
chr16	85613351	85676204	chr16:85613351-85676204	1	+	85613391	85672539	789624	15	47,200,173,198,192,323,328,620,113,271,114,372,285,104,3800,	0,35200,40926,41442,42374,42991,43925,47794,49629,49992,51663,52624,54788,57643,59053,
#Partially deleted in new
chr16	85654431	85676204	chr16:85654431-85676204	0	+	85654431	85672539	789624	12	19,198,192,323,328,620,113,271,372,285,104,3800,	0,362,1294,1911,2845,6714,8549,8912,11544,13708,16563,17973,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	85659377	85659675	chr16:85659377-85659675	3	+	85659377	85659377	8553170	1	298,	0,
#Deleted in new
chr16	85661489	85663353	chr16:85661489-85663353	0	+	85661489	85661489	8553170	2	276,373,	0,1491,
#Partially deleted in new
chr16	85662290	85676204	chr16:85662290-85676204	0	+	85662290	85662290	8553170	5	1324,372,285,104,3800,	0,3685,5849,8704,10114,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	85663365	85672893	chr16:85663365-85672893	0	+	85663365	85672411	789624	7	249,114,372,285,104,128,489,	0,1649,2610,4774,7629,8816,9039,
#Deleted in new
chr16	85664539	85666004	chr16:85664539-85666004	0	+	85664539	85664539	8553170	2	589,29,	0,1436,
#Deleted in new
chr16	85665019	85666622	chr16:85665019-85666622	0	+	85665019	85665019	8553170	2	109,647,	0,956,
#Partially deleted in new
chr16	85670627	85672496	chr16:85670627-85672496	0	+	85670627	85670627	8553170	2	471,92,	0,1777,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	85671830	85672648	chr16:85671830-85672648	0	+	85671830	85671830	8553170	2	311,244,	0,574,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	85676197	85688999	chr16:85676197-85688999	3	-	85678211	85688898	0	5	2140,127,100,115,191,	0,2342,5384,11262,12611,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	85678569	85688025	chr16:85678569-85688025	0	-	85678569	85687469	789624	4	97,100,115,313,	0,3012,8890,9143,
#Partially deleted in new
chr16	85678622	85690073	chr16:85678622-85690073	0	-	85678622	85687469	789624	4	44,100,115,278,	0,2959,8837,11173,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	85690083	85751010	chr16:85690083-85751010	0	-	85690083	85690083	8553170	2	694,85,	0,60842,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	85690169	85751129	chr16:85690169-85751129	1	-	85690718	85735217	789624	4	608,144,46,204,	0,19994,45020,60756,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	85697334	85697868	chr16:85697334-85697868	3	-	85697334	85697334	8553170	1	534,	0,
#Partially deleted in new
chr16	85707516	85751091	chr16:85707516-85751091	3	-	85708007	85735217	789624	4	550,144,46,166,	0,2647,27673,43409,
#Partially deleted in new
chr16	85707516	85710850	chr16:85707516-85710850	1	-	85708007	85710299	789624	2	550,687,	0,2647,
#Partially deleted in new
chr16	85707516	85750951	chr16:85707516-85750951	1	-	85708007	85710194	789624	4	550,122,46,26,	0,2647,27673,43409,
#Partially deleted in new
chr16	85707531	85751105	chr16:85707531-85751105	1	-	85708007	85735217	789624	3	535,46,180,	0,27658,43394,
#Partially deleted in new
chr16	85707653	85751112	chr16:85707653-85751112	1	-	85708007	85710194	789624	5	413,122,64,46,187,	0,2510,2756,27536,43272,
#Partially deleted in new
chr16	85741620	85741700	chr16:85741620-85741700	3	-	85741620	85741620	5263520	1	80,	0,
#Partially deleted in new
chr16	85778623	85799540	chr16:85778623-85799540	3	-	85779707	85799295	789624	5	1244,95,70,77,476,	0,1755,2587,10350,20441,
#Partially deleted in new
chr16	85778623	85799608	chr16:85778623-85799608	1	-	85779864	85799295	789624	4	1244,70,77,544,	0,2587,10350,20441,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	85779397	85781223	chr16:85779397-85781223	0	-	85779397	85779397	8553170	1	1826,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	85779661	85781760	chr16:85779661-85781760	0	-	85779661	85779661	8553170	3	206,95,550,	0,717,1549,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	85781774	85781899	chr16:85781774-85781899	3	-	85781774	85781774	8553170	1	125,	0,
#Partially deleted in new
chr16	85784381	85787617	chr16:85784381-85787617	3	+	85784381	85784381	8553170	2	667,22,	0,3214,
#Partially deleted in new
chr16	85788896	85799396	chr16:85788896-85799396	0	-	85788896	85788896	8553170	2	154,332,	0,10168,
#Deleted in new
chr16	85792414	85792933	chr16:85792414-85792933	3	+	85792414	85792414	789624	2	180,228,	0,291,
#Partially deleted in new
chr16	85798632	85804992	chr16:85798632-85804992	0	+	85801205	85804992	789624	3	436,74,56,	0,2572,6304,
#Partially deleted in new
chr16	85799611	85805742	chr16:85799611-85805742	0	+	85799611	85799611	8553170	4	141,74,215,121,	0,1593,5325,6010,
#Partially deleted in new
chr16	85799621	85807002	chr16:85799621-85807002	0	+	85799621	85799621	8553170	3	131,74,2066,	0,1583,5315,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	85799637	85805096	chr16:85799637-85805096	0	+	85801205	85804595	789624	4	115,74,122,160,	0,1567,4902,5299,
#Partially deleted in new
chr16	85799653	85805328	chr16:85799653-85805328	0	+	85799653	85799653	8553170	3	99,74,388,	0,1551,5287,
#Partially deleted in new
chr16	85799682	85806805	chr16:85799682-85806805	1	+	85801205	85806502	789624	5	70,74,168,132,350,	0,1522,5254,6050,6773,
#Partially deleted in new
chr16	85799683	85807002	chr16:85799683-85807002	1	+	85801205	85806874	789624	5	69,74,168,132,265,	0,1521,5253,6049,7054,
#Partially deleted in new
chr16	85799692	85807044	chr16:85799692-85807044	3	+	85801205	85806874	789624	5	192,74,168,132,307,	0,1512,5244,6040,7045,
#Partially deleted in new
chr16	85799695	85805350	chr16:85799695-85805350	0	+	85799695	85799695	8553170	3	57,95,414,	0,1488,5241,
#Partially deleted in new
chr16	85799696	85807002	chr16:85799696-85807002	1	+	85801205	85806874	789624	5	56,95,168,132,265,	0,1487,5240,6036,7041,
#Partially deleted in new
chr16	85799696	85805426	chr16:85799696-85805426	0	+	85799696	85799696	8553170	2	56,490,	0,5240,
#Partially deleted in new
chr16	85799697	85806802	chr16:85799697-85806802	0	+	85804977	85806802	789624	5	55,74,164,132,65,	0,1507,5243,6035,7040,
#Partially deleted in new
chr16	85799707	85806975	chr16:85799707-85806975	0	+	85801205	85805115	789624	5	45,74,217,132,149,	0,1497,5229,6025,7119,
#Partially deleted in new
chr16	85799759	85805309	chr16:85799759-85805309	0	+	85799759	85799759	8553170	3	125,74,373,	0,1445,5177,
#Partially deleted in new
chr16	85801201	85806967	chr16:85801201-85806967	0	+	85801201	85801201	8553170	3	77,928,230,	0,3735,5536,
#Partially deleted in new
chr16	85801201	85806968	chr16:85801201-85806968	1	+	85801205	85805872	789624	3	77,168,1236,	0,3735,4531,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	85803056	85807002	chr16:85803056-85807002	0	+	85803056	85803056	8553170	1	3946,	0,
#Deleted in new
chr16	85805068	85807031	chr16:85805068-85807031	0	+	85805068	85805068	8553170	3	40,118,294,	0,678,1669,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	85814424	85815062	chr16:85814424-85815062	7	-	85814424	85814424	16724991	2	128,187,	0,451,
#Deleted in new
chr16	85815872	85816536	chr16:85815872-85816536	7	-	85815872	85815872	16724991	1	664,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	85859520	85862012	chr16:85859520-85862012	3	+	85859520	85859520	8553170	1	2492,	0,
#Partially deleted in new
chr16	85898802	85922609	chr16:85898802-85922609	3	+	85903015	85921282	789624	9	421,175,184,89,106,48,387,116,1504,	0,4212,10187,12767,14328,15670,19614,21306,22303,
#Partially deleted in new
chr16	85899162	85903156	chr16:85899162-85903156	0	+	85903015	85903156	789624	3	61,319,142,	0,1765,3852,
#Partially deleted in new
chr16	85899187	85903531	chr16:85899187-85903531	0	+	85899187	85899187	8553170	2	36,517,	0,3827,
#Partially deleted in new
chr16	85902688	85909882	chr16:85902688-85909882	1	+	85903015	85909196	789624	2	501,893,	0,6301,
#Partially deleted in new
chr16	85902814	85913160	chr16:85902814-85913160	0	+	85903015	85913160	789624	5	53,175,184,89,30,	0,200,6175,8755,10316,
#Partially deleted in new
chr16	85902837	85918800	chr16:85902837-85918800	0	+	85903015	85918800	789624	7	52,175,184,89,106,48,384,	0,177,6152,8732,10293,11635,15579,
#Partially deleted in new
chr16	85903130	85913312	chr16:85903130-85913312	0	+	85903130	85903130	8553170	4	59,184,89,182,	0,5859,8439,10000,
#Partially deleted in new
chr16	85908987	85922296	chr16:85908987-85922296	0	+	85908987	85921172	789624	4	186,89,116,1191,	0,2582,11121,12118,
#Partially deleted in new
chr16	85913973	85918489	chr16:85913973-85918489	0	+	85918446	85918489	789624	3	168,48,73,	0,499,4443,
#Partially deleted in new
chr16	85914042	85921371	chr16:85914042-85921371	1	+	85918427	85921282	789624	5	129,48,387,116,266,	0,430,4374,6066,7063,
#Partially deleted in new
chr16	85914312	85921274	chr16:85914312-85921274	0	+	85918427	85921274	789624	4	208,387,116,169,	0,4104,5796,6793,
#Deleted in new
chr16	85918346	85918416	chr16:85918346-85918416	3	+	85918346	85918346	5263520	1	70,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	85924983	85948824	chr16:85924983-85948824	0	+	85924983	85924983	8553170	4	77,215,273,329,	0,20432,22881,23512,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	85931881	85948824	chr16:85931881-85948824	3	+	85931881	85931881	8553170	4	393,215,273,329,	0,13534,15983,16614,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	85935280	85936223	chr16:85935280-85936223	3	-	85935280	85935280	8553170	2	635,115,	0,828,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	85935296	85948824	chr16:85935296-85948824	1	+	85935296	85935296	8553170	4	715,215,273,329,	0,10119,12568,13199,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	85963327	85985386	chr16:85963327-85985386	3	-	85963327	85963327	8553170	3	780,158,69,	0,21114,21990,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	85981749	85984881	chr16:85981749-85984881	3	+	85981749	85981749	8553170	2	122,510,	0,2622,
#Partially deleted in new
chr16	85986763	85995899	chr16:85986763-85995899	3	-	85986763	85986763	8553170	3	294,103,690,	0,1220,8446,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	86035626	86036419	chr16:86035626-86036419	3	+	86035626	86035626	8553170	1	793,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	86081408	86089526	chr16:86081408-86089526	3	-	86081408	86081408	8553170	2	7265,165,	0,7953,
#Deleted in new
chr16	86158205	86158798	chr16:86158205-86158798	3	-	86158205	86158205	8553170	2	292,187,	0,406,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	86192792	86198913	chr16:86192792-86198913	3	-	86192792	86192792	8553170	3	3606,409,24,	0,3978,6097,
#Deleted in new
chr16	86196180	86199720	chr16:86196180-86199720	0	+	86196180	86196180	789624	2	232,209,	0,3331,
#Deleted in new
chr16	86198115	86199720	chr16:86198115-86199720	3	+	86198115	86198115	8553170	2	997,209,	0,1396,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	86221422	86286317	chr16:86221422-86286317	3	-	86221422	86221422	8553170	8	351,341,236,116,138,80,120,264,	0,1094,4009,4424,5217,47581,54280,64631,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	86225579	86301303	chr16:86225579-86301303	0	-	86225579	86225579	8553170	6	88,116,138,80,120,132,	0,267,1060,43424,50123,75592,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	86275428	86275523	chr16:86275428-86275523	3	-	86275428	86275428	8553170	1	95,	0,
#Partially deleted in new
chr16	86286426	86293389	chr16:86286426-86293389	3	+	86286426	86286426	5263520	3	123,80,1862,	0,4238,5101,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	86331843	86345644	chr16:86331843-86345644	0	-	86331843	86331843	8553170	6	835,86,220,1301,83,153,	0,1115,1844,5517,6906,13648,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	86331843	86337556	chr16:86331843-86337556	0	-	86331843	86331843	8553170	5	835,86,220,195,196,	0,1115,1844,3834,5517,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	86331849	86345679	chr16:86331849-86345679	3	-	86331849	86331849	789624	7	829,86,220,232,980,83,188,	0,1109,1838,5511,5832,6900,13642,
#Partially deleted in new
chr16	86337994	86349639	chr16:86337994-86349639	0	-	86337994	86337994	8553170	3	667,83,89,	0,755,11556,
#Partially deleted in new
chr16	86338133	86349683	chr16:86338133-86349683	0	-	86338133	86338133	8553170	3	528,83,109,	0,616,11441,
#Partially deleted in new
chr16	86338248	86349683	chr16:86338248-86349683	0	-	86338248	86338248	8553170	4	413,83,138,133,	0,501,10769,11302,
#Partially deleted in new
chr16	86338449	86349680	chr16:86338449-86349680	0	-	86338449	86338449	8553170	4	212,83,131,130,	0,300,10568,11101,
#Partially deleted in new
chr16	86434829	86435884	chr16:86434829-86435884	7	-	86434829	86434829	16724991	2	669,75,	0,980,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	86474528	86508860	chr16:86474528-86508860	3	-	86474528	86474528	789624	4	2671,166,52,206,	0,3357,4176,34126,
#Partially deleted in new
chr16	86477123	86490881	chr16:86477123-86490881	0	-	86477123	86477123	8553170	3	76,250,29,	0,13140,13729,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	86487705	86490879	chr16:86487705-86490879	0	-	86487705	86487705	8553170	2	2808,27,	0,3147,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	86487736	86509099	chr16:86487736-86509099	1	-	86487736	86487736	789624	4	1996,250,152,445,	0,2527,3116,20918,
#Partially deleted in new
chr16	86490182	86508876	chr16:86490182-86508876	0	-	86490182	86490182	8553170	2	331,222,	0,18472,
#Deleted in new
chr16	86490225	86498585	chr16:86490225-86498585	0	-	86490225	86490225	8553170	3	288,152,162,	0,627,8198,
#Partially deleted in new
chr16	86490267	86508877	chr16:86490267-86508877	0	-	86490267	86490267	8553170	2	737,223,	0,18387,
#Deleted in new
chr16	86510526	86515418	chr16:86510526-86515418	3	+	86510569	86513085	789624	2	1022,2494,	0,2398,
#Deleted in new
chr16	86520382	86523897	chr16:86520382-86523897	3	-	86520382	86520382	8553170	1	3515,	0,
#Deleted in new
chr16	86525456	86526252	chr16:86525456-86526252	7	+	86525456	86525456	16724991	1	796,	0,
#Partially deleted in new
chr16	86530175	86555210	chr16:86530175-86555210	1	-	86532010	86555184	0	8	2306,126,113,91,114,114,107,42,	0,11521,11925,16383,18288,21857,24469,24993,
#Deleted in new
chr16	86530177	86533800	chr16:86530177-86533800	0	-	86530177	86530177	8553170	1	3623,	0,
#Partially deleted in new
chr16	86530832	86555235	chr16:86530832-86555235	1	-	86532010	86542166	789624	9	1649,126,113,91,77,114,114,104,63,	0,10864,11268,15726,17202,17631,21346,23812,24340,
#Partially deleted in new
chr16	86531971	86555203	chr16:86531971-86555203	1	-	86532010	86555184	0	8	510,126,113,91,114,114,107,35,	0,9725,10129,14587,16492,20207,22673,23197,
#Partially deleted in new
chr16	86531971	86555203	chr16:86531971-86555203	1	-	86532010	86555184	0	8	510,126,113,91,114,114,104,35,	0,9725,10129,14587,16492,20207,22673,23197,
#Partially deleted in new
chr16	86531971	86555203	chr16:86531971-86555203	0	-	86552014	86555184	789624	8	510,126,113,91,114,174,107,35,	0,9725,10129,14587,16492,20001,22673,23197,
#Partially deleted in new
chr16	86531971	86555203	chr16:86531971-86555203	3	-	86532010	86555184	0	8	510,126,113,91,114,114,104,35,	0,9725,10129,14587,16492,20061,22673,23197,
#Partially deleted in new
chr16	86532335	86555235	chr16:86532335-86555235	0	-	86542162	86555184	789624	5	146,126,113,104,67,	0,9361,9765,22309,22833,
#Partially deleted in new
chr16	86532361	86542545	chr16:86532361-86542545	0	-	86532361	86532361	8553170	3	120,126,445,	0,9335,9739,
#Partially deleted in new
chr16	86540719	86554749	chr16:86540719-86554749	0	-	86541189	86554749	789624	7	479,126,113,91,114,114,105,	0,977,1381,5839,7744,11313,13925,
#Partially deleted in new
chr16	86541534	86554748	chr16:86541534-86554748	0	-	86541657	86554748	789624	6	288,113,91,114,114,104,	0,566,5024,6929,10498,13110,
#Partially deleted in new
chr16	86541738	86555235	chr16:86541738-86555235	0	-	86541738	86555184	789624	6	84,113,91,114,104,67,	0,362,4820,6725,12906,13430,
#Partially deleted in new
chr16	86542109	86555235	chr16:86542109-86555235	0	-	86546642	86555184	789624	6	104,91,77,114,107,67,	0,4449,5925,6354,12535,13059,
#Partially deleted in new
chr16	86542111	86555235	chr16:86542111-86555235	0	-	86542111	86542166	789624	6	102,91,77,114,114,67,	0,4447,5923,6352,9921,13057,
#Partially deleted in new
chr16	86542116	86555235	chr16:86542116-86555235	0	-	86542116	86542166	789624	5	97,91,114,174,67,	0,4442,6347,9856,13052,
#Partially deleted in new
chr16	86546604	86555154	chr16:86546604-86555154	0	-	86546604	86554707	789624	5	45,114,114,107,113,	0,1859,5574,8040,8437,
#Partially deleted in new
chr16	86547145	86555178	chr16:86547145-86555178	0	-	86547531	86555178	789624	6	423,77,114,114,107,10,	0,889,1318,5033,7499,8023,
#Partially deleted in new
chr16	86548066	86555169	chr16:86548066-86555169	0	-	86548066	86554707	789624	5	45,114,114,107,128,	0,397,3966,6578,6975,
#Partially deleted in new
chr16	86548487	86555021	chr16:86548487-86555021	0	-	86548487	86554707	789624	3	90,114,377,	0,3545,6157,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	86552037	86553721	chr16:86552037-86553721	0	-	86552037	86552037	8553170	2	109,462,	0,1222,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	86555319	86557299	chr16:86555319-86557299	3	+	86555319	86555319	789624	1	1980,	0,
#Deleted in new
chr16	86565144	86567761	chr16:86565144-86567761	3	-	86565144	86565144	789624	2	174,145,	0,2472,
#Deleted in new
chr16	86566828	86569728	chr16:86566828-86569728	3	+	86567335	86568841	8553170	1	2900,	0,
#Deleted in new
chr16	86567250	86569728	chr16:86567250-86569728	1	+	86567335	86568841	0	1	2478,	0,
#Deleted in new
chr16	86576367	86579066	chr16:86576367-86579066	0	+	86578723	86579066	789624	2	87,505,	0,2194,
#Deleted in new
chr16	86578505	86582160	chr16:86578505-86582160	3	+	86578723	86579761	789624	1	3655,	0,
#Deleted in new
chr16	86595188	86597639	chr16:86595188-86597639	3	+	86595188	86595188	8553170	1	2451,	0,
#Deleted in new
chr16	86636327	86637145	chr16:86636327-86637145	3	-	86636327	86636327	8553170	2	136,133,	0,685,
#Partially deleted in new
chr16	86646300	86668923	chr16:86646300-86668923	3	+	86646300	86646300	8553170	3	63,264,181,	0,792,22442,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	86698117	86698841	chr16:86698117-86698841	3	+	86698117	86698117	8553170	1	724,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	86710121	86738461	chr16:86710121-86738461	1	+	86710121	86710121	8553170	6	86,99,145,84,180,616,	0,5123,8138,24704,27288,27724,
#Deleted in new
chr16	86720687	86721954	chr16:86720687-86721954	3	-	86720687	86720687	789624	2	316,190,	0,1077,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	86722058	86738766	chr16:86722058-86738766	1	+	86722058	86722058	8553170	3	89,63,1357,	0,12767,15351,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	86722084	86738459	chr16:86722084-86738459	1	+	86722084	86722084	8553170	4	63,84,257,1050,	0,12741,14423,15325,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	86722090	86742083	chr16:86722090-86742083	1	+	86722090	86722090	789624	3	41,84,4674,	0,12735,15319,
#Partially deleted in new
chr16	86722091	86737719	chr16:86722091-86737719	0	+	86722091	86722091	789624	4	56,100,84,310,	0,5776,12734,15318,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	86722106	86738459	chr16:86722106-86738459	2	+	86722106	86722106	8553170	3	41,84,1050,	0,12719,15303,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	86727346	86738593	chr16:86727346-86738593	1	+	86727346	86727346	8553170	4	190,100,84,1184,	0,521,7479,10063,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	86727369	86738459	chr16:86727369-86738459	0	+	86727369	86727369	8553170	3	167,84,1050,	0,7456,10040,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	86732668	86738459	chr16:86732668-86738459	0	+	86732668	86732668	8553170	3	89,84,1050,	0,2157,4741,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	86734798	86738459	chr16:86734798-86738459	0	+	86734798	86734798	8553170	2	111,1050,	0,2611,
#Deleted in new
chr16	86906174	86906472	chr16:86906174-86906472	7	-	86906174	86906174	16724991	1	298,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	87057783	87063991	chr16:87057783-87063991	3	+	87057783	87057783	789624	3	2716,127,1240,	0,3274,4968,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	87066704	87069752	chr16:87066704-87069752	3	+	87066704	87066704	8553170	2	69,395,	0,2653,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	87083561	87302762	chr16:87083561-87302762	0	-	87083561	87083561	8553170	5	345,132,144,919,110,	0,54862,55649,56623,219091,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	87129856	87133107	chr16:87129856-87133107	3	+	87129856	87129856	8553170	2	46,2988,	0,263,
#Partially deleted in new
chr16	87212121	87226430	chr16:87212121-87226430	3	+	87212121	87212121	789624	3	91,280,1076,	0,764,13233,
#Deleted in new
chr16	87215914	87216452	chr16:87215914-87216452	3	+	87215914	87215914	8553170	2	183,195,	0,343,
#Partially deleted in new
chr16	87262758	87292438	chr16:87262758-87292438	1	-	87262758	87262758	8553170	5	142,230,79,54,71,	0,5232,27960,28925,29609,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	87267257	87292438	chr16:87267257-87292438	1	-	87267257	87267257	8553170	2	963,755,	0,24426,
#Deleted in new
chr16	87268184	87268337	chr16:87268184-87268337	7	+	87268184	87268184	16724991	1	153,	0,
#Partially deleted in new
chr16	87271906	87292409	chr16:87271906-87292409	1	-	87271906	87271906	789624	5	248,237,79,54,42,	0,1241,18812,19777,20461,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	87290725	87292038	chr16:87290725-87292038	2	-	87290725	87290725	8553170	2	72,355,	0,958,
#Partially deleted in new
chr16	87293010	87303073	chr16:87293010-87303073	0	-	87293010	87293010	8553170	4	77,122,117,171,	0,5777,9642,9892,
#Deleted in new
chr16	87296948	87297633	chr16:87296948-87297633	3	+	87296948	87296948	8553170	1	685,	0,
#Partially deleted in new
chr16	87302800	87317420	chr16:87302800-87317420	1	-	87305758	87317193	789624	5	275,187,126,52,334,	0,2918,12170,12971,14286,
#Partially deleted in new
chr16	87302813	87317416	chr16:87302813-87317416	1	-	87305758	87317242	789624	5	262,187,126,52,326,	0,2905,12157,12958,14277,
#Partially deleted in new
chr16	87302813	87306125	chr16:87302813-87306125	0	-	87302813	87302813	8553170	3	262,187,76,	0,2905,3236,
#Partially deleted in new
chr16	87302813	87303655	chr16:87302813-87303655	0	-	87302813	87302813	8553170	1	842,	0,
#Partially deleted in new
chr16	87302875	87334273	chr16:87302875-87334273	3	-	87305758	87334273	789624	5	200,187,126,52,388,	0,2843,12095,12896,31010,
#Partially deleted in new
chr16	87302883	87317380	chr16:87302883-87317380	3	-	87303056	87317242	789624	7	192,187,37,147,126,52,290,	0,2835,7413,8266,12087,12888,14207,
#Partially deleted in new
chr16	87317508	87318043	chr16:87317508-87318043	3	+	87317508	87317508	789624	2	214,187,	0,348,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	87326986	87383757	chr16:87326986-87383757	3	-	87331287	87383744	0	9	4524,401,154,110,75,168,77,72,353,	0,6899,8317,9168,15890,16611,20187,33308,56418,
#Partially deleted in new
chr16	87329335	87383763	chr16:87329335-87383763	0	-	87333988	87383744	789624	3	2175,236,306,	0,4550,54122,
#Partially deleted in new
chr16	87330810	87389850	chr16:87330810-87389850	1	-	87331287	87343738	789624	9	700,401,154,110,75,168,77,72,114,	0,3075,4493,5344,12066,12787,16363,29484,58926,
#Partially deleted in new
chr16	87343685	87383748	chr16:87343685-87383748	0	-	87343685	87383744	789624	5	80,77,87,72,344,	0,3488,14725,16609,39719,
#Partially deleted in new
chr16	87343745	87367508	chr16:87343745-87367508	0	-	87343745	87343745	8553170	4	20,77,72,136,	0,3428,16549,23627,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	87362535	87367476	chr16:87362535-87367476	3	+	87362535	87362535	8553170	2	70,380,	0,4561,
#Partially deleted in new
chr16	87367651	87392107	chr16:87367651-87392107	0	-	87367651	87367651	8553170	3	294,112,25,	0,22085,24431,
#Partially deleted in new
chr16	87367744	87383751	chr16:87367744-87383751	0	-	87367744	87367744	8553170	2	201,347,	0,15660,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	87383994	87391740	chr16:87383994-87391740	0	+	87383994	87383994	8553170	3	202,111,143,	0,5767,7603,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	87384055	87391853	chr16:87384055-87391853	0	+	87384055	87384055	8553170	3	141,163,256,	0,5495,7542,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	87386010	87392142	chr16:87386010-87392142	0	-	87386010	87386010	8553170	4	196,70,112,60,	0,2678,3726,6072,
#Partially deleted in new
chr16	87389760	87391738	chr16:87389760-87391738	0	+	87389760	87389760	8553170	2	71,141,	0,1837,
#Partially deleted in new
chr16	87389769	87391738	chr16:87389769-87391738	0	+	87389769	87389769	8553170	2	146,141,	0,1828,
#Partially deleted in new
chr16	87391799	87404779	chr16:87391799-87404779	3	+	87392427	87403097	0	4	668,56,107,1857,	0,7015,10375,11123,
#Partially deleted in new
chr16	87392316	87403778	chr16:87392316-87403778	0	+	87392427	87399645	789624	5	151,56,89,107,856,	0,6498,7281,9858,10606,
#Partially deleted in new
chr16	87392333	87402609	chr16:87392333-87402609	1	+	87392427	87402306	789624	3	134,56,435,	0,6481,9841,
#Partially deleted in new
chr16	87392343	87404779	chr16:87392343-87404779	0	+	87392427	87392634	789624	5	976,56,89,107,1857,	0,6471,7254,9831,10579,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	87392422	87399504	chr16:87392422-87399504	0	+	87392422	87392422	8553170	2	45,690,	0,6392,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	87396703	87400295	chr16:87396703-87400295	3	-	87396703	87396703	8553170	2	238,275,	0,3317,
#Partially deleted in new
chr16	87406245	87492045	chr16:87406245-87492045	3	-	87410279	87491827	789624	13	4090,1461,141,128,92,283,55,95,110,72,74,124,377,	0,5270,6809,8168,9030,11214,12601,13537,14361,17564,26882,53762,85423,
#Partially deleted in new
chr16	87406256	87491859	chr16:87406256-87491859	0	-	87410279	87491827	789624	14	758,2658,1461,141,128,92,283,55,95,110,72,74,124,191,	0,1421,5259,6798,8157,9019,11203,12590,13526,14350,17553,26871,53751,85412,
#Partially deleted in new
chr16	87411411	87433134	chr16:87411411-87433134	0	-	87411420	87433134	789624	10	1565,141,128,92,283,55,95,110,72,7,	0,1643,3002,3864,6048,7435,8371,9195,12398,21716,
#Partially deleted in new
chr16	87415311	87417926	chr16:87415311-87417926	0	-	87415311	87415311	8553170	2	56,467,	0,2148,
#Deleted in new
chr16	87467137	87467654	chr16:87467137-87467654	7	+	87467137	87467137	16724991	1	517,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	87470369	87474370	chr16:87470369-87474370	3	-	87470369	87470369	8553170	1	4001,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	87492554	87496998	chr16:87492554-87496998	1	+	87492554	87492554	8553170	4	105,138,195,9,	0,1543,2964,4435,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	87493273	87497166	chr16:87493273-87497166	1	+	87493273	87493273	8553170	3	240,138,177,	0,824,3716,
#Deleted in new
chr16	87600525	87602190	chr16:87600525-87602190	3	-	87600525	87600525	8553170	1	1665,	0,
#Partially deleted in new
chr16	87601834	87697927	chr16:87601834-87697927	0	+	87601834	87601834	789624	6	96,778,125,881,223,88,	0,42423,82307,87811,94745,96005,
#Deleted in new
chr16	87602886	87604627	chr16:87602886-87604627	0	+	87602886	87602886	8553170	2	642,388,	0,1353,
#Partially deleted in new
chr16	87602904	87698156	chr16:87602904-87698156	3	+	87603146	87696660	789624	5	624,778,125,881,1577,	0,41353,81237,86741,93675,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	87653561	87698142	chr16:87653561-87698142	0	+	87653561	87653561	8553170	4	1454,125,881,1563,	0,30580,36084,43018,
#Deleted in new
chr16	87683944	87684477	chr16:87683944-87684477	3	-	87683944	87683944	8553170	1	533,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	87693536	87696147	chr16:87693536-87696147	3	-	87693536	87693536	8553170	1	2611,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	87696484	87699415	chr16:87696484-87699415	0	-	87696484	87696484	8553170	2	172,216,	0,2715,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	87698147	87702591	chr16:87698147-87702591	1	-	87701638	87702514	789624	1	4444,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr16	87698148	87765972	chr16:87698148-87765972	0	-	87708350	87765890	789624	17	2002,106,114,487,105,112,117,403,209,76,160,93,137,99,79,92,181,	0,2779,3405,3694,4934,5172,10201,11116,13086,16349,28616,32403,50524,57045,58250,63800,67643,
#Deleted in new
chr16	87700777	87701724	chr16:87700777-87701724	0	-	87700777	87700777	8553170	2	256,87,	0,860,
#Deleted in new
chr16	87703025	87708387	chr16:87703025-87708387	0	-	87703025	87703025	8553170	2	407,38,	0,5324,
#Partially deleted in new
chr16	87707811	87750942	chr16:87707811-87750942	0	-	87707811	87707811	8553170	9	261,117,209,76,160,93,137,166,68,	0,538,3423,6686,18953,22740,40861,42425,43063,
#Partially deleted in new
chr16	87707811	87765976	chr16:87707811-87765976	1	-	87708350	87765890	789624	11	264,117,403,209,76,160,137,99,79,92,185,	0,538,1453,3423,6686,18953,40861,47382,48587,54137,57980,
#Partially deleted in new
chr16	87707811	87765899	chr16:87707811-87765899	1	-	87708350	87765890	789624	10	261,117,403,209,76,160,93,137,99,108,	0,538,1453,3423,6686,18953,22740,40861,47382,57980,
#Partially deleted in new
chr16	87707812	87765949	chr16:87707812-87765949	3	-	87708350	87765890	789624	12	263,117,403,209,76,160,93,137,99,79,92,158,	0,537,1452,3422,6685,18952,22739,40860,47381,48586,54136,57979,
#Partially deleted in new
chr16	87707812	87743044	chr16:87707812-87743044	0	-	87707812	87707812	8553170	8	263,117,403,209,76,160,93,56,	0,537,1452,3422,6685,18952,22739,35176,
#Deleted in new
chr16	87707815	87710877	chr16:87707815-87710877	0	-	87707815	87707815	8553170	3	260,199,1613,	0,534,1449,
#Partially deleted in new
chr16	87707839	87765929	chr16:87707839-87765929	0	-	87748799	87765890	789624	11	233,117,403,209,76,160,93,137,99,92,138,	0,510,1425,3395,6658,18925,22712,40833,47354,54109,57952,
#Partially deleted in new
chr16	87707913	87765992	chr16:87707913-87765992	1	-	87707913	87730607	789624	11	159,117,209,76,160,93,137,99,79,92,201,	0,436,3321,6584,18851,22638,40759,47280,48485,54035,57878,
#Partially deleted in new
chr16	87709437	87765951	chr16:87709437-87765951	0	-	87709437	87765890	789624	7	230,209,76,160,93,137,160,	0,1797,5060,17327,21114,39235,56354,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	87709462	87762016	chr16:87709462-87762016	0	-	87709462	87709462	8553170	8	205,209,76,160,93,137,1284,68,	0,1772,5035,17302,21089,39210,45731,52486,
#Partially deleted in new
chr16	87710797	87726917	chr16:87710797-87726917	0	-	87710797	87710797	8553170	3	646,76,153,	0,3700,15967,
#Partially deleted in new
chr16	87711235	87740964	chr16:87711235-87740964	0	-	87711235	87711235	8553170	4	208,76,160,141,	0,3262,15529,29588,
#Partially deleted in new
chr16	87726820	87731006	chr16:87726820-87731006	0	-	87726820	87726820	8553170	2	104,455,	0,3731,
#Partially deleted in new
chr16	87726898	87765933	chr16:87726898-87765933	0	-	87726898	87726898	8553170	5	26,93,99,202,142,	0,3653,28295,35050,38893,
#Partially deleted in new
chr16	87729317	87762154	chr16:87729317-87762154	0	-	87729317	87729317	8553170	5	47,93,137,99,206,	0,1234,19355,25876,32631,
#Partially deleted in new
chr16	87730606	87765967	chr16:87730606-87765967	0	-	87748799	87765890	789624	6	38,137,61,56,92,176,	0,18066,24587,25815,31342,35185,
#Partially deleted in new
chr16	87730635	87765961	chr16:87730635-87765961	0	-	87755278	87765890	789624	6	9,137,99,56,92,170,	0,18037,24558,25786,31313,35156,
#Partially deleted in new
chr16	87739770	87747706	chr16:87739770-87747706	3	-	87739770	87739770	8553170	3	98,110,130,	0,811,7806,
#Partially deleted in new
chr16	87748737	87765964	chr16:87748737-87765964	0	-	87748737	87748737	8553170	4	72,99,202,173,	0,6456,13211,17054,
#Partially deleted in new
chr16	87748798	87765931	chr16:87748798-87765931	0	-	87748798	87765890	789624	6	11,99,79,92,141,140,	0,6395,7600,13150,16267,16993,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	87755197	87765992	chr16:87755197-87765992	0	-	87762018	87765890	789624	5	95,79,121,88,201,	0,1201,2145,6751,10594,
#Partially deleted in new
chr16	87761957	87765961	chr16:87761957-87765961	0	-	87765304	87765890	789624	3	83,275,170,	0,3108,3834,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	87763484	87765961	chr16:87763484-87765961	0	-	87765304	87765890	789624	3	119,275,170,	0,1581,2307,
#Partially deleted in new
chr16	87773487	87779374	chr16:87773487-87779374	3	-	87773487	87773487	8553170	3	54,133,388,	0,4380,5499,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	87773510	87779148	chr16:87773510-87779148	1	-	87773510	87773510	8553170	3	79,133,341,	0,4357,5297,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	87780133	87806476	chr16:87780133-87806476	3	-	87780133	87780133	8553170	2	662,94,	0,26249,
#Partially deleted in new
chr16	87830022	87869488	chr16:87830022-87869488	3	-	87832969	87869422	789624	10	3003,178,150,97,104,124,45,106,126,604,	0,4391,6475,7822,8691,9679,10406,11027,21701,38862,
#Partially deleted in new
chr16	87830022	87863639	chr16:87830022-87863639	1	-	87832969	87840445	789624	10	3003,178,150,97,104,124,45,106,126,50,	0,4391,6475,7822,8691,9679,10406,11027,21701,33567,
#Partially deleted in new
chr16	87832731	87836805	chr16:87832731-87836805	0	-	87832731	87832731	8553170	3	294,178,308,	0,1682,3766,
#Deleted in new
chr16	87834591	87834660	chr16:87834591-87834660	3	-	87834591	87834591	5263520	1	69,	0,
#Deleted in new
chr16	87836531	87837663	chr16:87836531-87837663	3	+	87836531	87836531	8553170	2	271,251,	0,881,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	87881545	87936516	chr16:87881545-87936516	3	-	87888128	87936450	789624	7	6727,156,63,96,119,198,208,	0,10253,20366,20879,23240,45202,54763,
#Partially deleted in new
chr16	87881545	87936580	chr16:87881545-87936580	1	-	87881810	87936450	8553170	7	394,156,63,96,119,198,272,	0,10253,20366,20879,23240,45202,54763,
#Partially deleted in new
chr16	87881548	87936580	chr16:87881548-87936580	1	-	87891814	87936450	8553170	5	391,156,96,198,272,	0,10250,20876,45199,54760,
#Partially deleted in new
chr16	87888016	87936560	chr16:87888016-87936560	0	-	87893675	87936450	8553170	8	256,156,108,63,96,119,198,252,	0,3782,5602,13895,14408,16769,38731,48292,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	87888017	87892268	chr16:87888017-87892268	0	-	87888017	87888017	8553170	2	255,470,	0,3781,
#Partially deleted in new
chr16	87888017	87936479	chr16:87888017-87936479	1	-	87888128	87936450	789624	7	255,156,63,96,119,198,171,	0,3781,13894,14407,16768,38730,48291,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	87892937	87893685	chr16:87892937-87893685	3	-	87892937	87892937	8553170	2	164,256,	0,492,
#Partially deleted in new
chr16	87892954	87893735	chr16:87892954-87893735	7	+	87892954	87892954	16724991	2	160,307,	0,474,
#Partially deleted in new
chr16	87925538	87936529	chr16:87925538-87936529	0	-	87925538	87925538	8553170	3	87,198,221,	0,1209,10770,
#Deleted in new
chr16	87945057	87945202	chr16:87945057-87945202	7	-	87945057	87945057	16724991	1	145,	0,
#Partially deleted in new
chr16	87949243	87984251	chr16:87949243-87984251	0	+	87949243	87949243	8553170	3	518,92,192,	0,31792,34816,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	87950435	87981049	chr16:87950435-87981049	0	+	87975115	87981049	789624	3	492,138,14,	0,24612,30600,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	87950435	87984234	chr16:87950435-87984234	0	+	87950435	87950435	8553170	3	492,92,175,	0,30600,33624,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	87951431	88077317	chr16:87951431-88077317	1	+	87975115	88076661	789624	14	84,138,92,176,117,176,240,168,137,63,39,66,144,728,	0,23616,29604,32652,52863,54658,66996,76051,81677,83900,86541,113835,120637,125158,
#Partially deleted in new
chr16	87951431	88018455	chr16:87951431-88018455	0	+	87975115	88018455	789624	6	84,156,92,200,176,28,	0,23616,29604,32628,54658,66996,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	87951433	88077318	chr16:87951433-88077318	3	+	87975115	88076661	789624	13	82,138,92,200,176,240,168,137,72,39,66,144,729,	0,23614,29602,32626,54656,66994,76049,81675,83889,86539,113833,120635,125156,
#Partially deleted in new
chr16	87951433	87981102	chr16:87951433-87981102	0	+	87978589	87981102	789624	4	82,156,253,67,	0,23614,27006,29602,
#Partially deleted in new
chr16	87951433	88076661	chr16:87951433-88076661	1	+	87975115	88076661	789624	12	82,138,92,200,176,240,168,137,63,39,144,72,	0,23614,29602,32626,54656,66994,76049,81675,83898,86539,120635,125156,
#Partially deleted in new
chr16	87951434	88006183	chr16:87951434-88006183	0	+	87975115	87981066	789624	5	81,160,92,200,94,	0,23613,29601,32625,54655,
#Partially deleted in new
chr16	87951444	87984251	chr16:87951444-87984251	0	+	87975115	87984251	789624	5	71,93,138,92,192,	0,736,23603,29591,32615,
#Partially deleted in new
chr16	87951466	87957069	chr16:87951466-87957069	0	+	87951466	87951466	8553170	2	49,498,	0,5105,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	87951478	88077206	chr16:87951478-88077206	1	+	87975115	88076661	789624	13	37,156,92,200,176,240,168,137,72,39,66,144,617,	0,23569,29557,32581,54611,66949,76004,81630,83844,86494,113788,120590,125111,
#Partially deleted in new
chr16	87951480	88003931	chr16:87951480-88003931	0	+	87975115	87981066	789624	5	35,160,92,200,121,	0,23567,29555,32579,52330,
#Partially deleted in new
chr16	87951484	88004391	chr16:87951484-88004391	0	+	87975115	88003506	789624	6	31,138,92,200,82,97,	0,23563,29551,32575,51997,52810,
#Partially deleted in new
chr16	87951486	88077318	chr16:87951486-88077318	1	+	87975115	88076661	789624	12	29,138,92,200,176,240,168,137,72,39,144,729,	0,23561,29549,32573,54603,66941,75996,81622,83836,86486,120582,125103,
#Deleted in new
chr16	87952246	87952748	chr16:87952246-87952748	0	+	87952246	87952246	8553170	1	502,	0,
#Partially deleted in new
chr16	87959870	88004301	chr16:87959870-88004301	0	+	87975115	88004301	789624	5	123,138,92,200,7,	0,15177,21165,24189,44424,
#Partially deleted in new
chr16	87959870	88077315	chr16:87959870-88077315	1	+	87975115	88076661	789624	13	123,138,92,200,117,176,240,168,137,72,39,144,726,	0,15177,21165,24189,44424,46219,58557,67612,73238,75452,78102,112198,116719,
#Partially deleted in new
chr16	87963378	87984182	chr16:87963378-87984182	0	+	87975115	87984182	789624	4	102,138,92,123,	0,11669,17657,20681,
#Partially deleted in new
chr16	87966702	87984254	chr16:87966702-87984254	0	+	87975115	87984254	789624	4	141,138,92,195,	0,8345,14333,17357,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	87970017	88077318	chr16:87970017-88077318	1	+	87975115	88076661	789624	14	153,138,92,176,117,176,240,168,137,63,39,66,144,729,	0,5030,11018,14066,34277,36072,48410,57465,63091,65314,67955,95249,102051,106572,
#Partially deleted in new
chr16	87980534	87984227	chr16:87980534-87984227	0	+	87980534	87980534	8553170	2	593,168,	0,3525,
#Deleted in new
chr16	87982617	87984259	chr16:87982617-87984259	0	+	87982617	87982617	8553170	2	130,200,	0,1442,
#Partially deleted in new
chr16	88017189	88033219	chr16:88017189-88033219	0	+	88017189	88017189	8553170	4	220,240,168,111,	0,1238,10293,15919,
#Partially deleted in new
chr16	88035051	88076835	chr16:88035051-88076835	0	+	88035051	88035051	8553170	4	343,39,144,246,	0,2921,37017,41538,
#Partially deleted in new
chr16	88037272	88072130	chr16:88037272-88072130	0	+	88037272	88037272	8553170	2	739,62,	0,34796,
#Partially deleted in new
chr16	88071072	88077318	chr16:88071072-88077318	0	+	88071072	88071072	8553170	3	857,144,729,	0,996,5517,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	88079160	88087383	chr16:88079160-88087383	3	-	88079160	88079160	8553170	2	186,373,	0,7850,
#Deleted in new
chr16	88087386	88087932	chr16:88087386-88087932	3	+	88087386	88087386	8553170	2	131,82,	0,464,
#Partially deleted in new
chr16	88088040	88100959	chr16:88088040-88100959	3	-	88088040	88088040	8553170	2	3202,266,	0,12653,
#Deleted in new
chr16	88099408	88100985	chr16:88099408-88100985	0	-	88099408	88099408	789624	2	122,292,	0,1285,
#Partially deleted in new
chr16	88177288	88178646	chr16:88177288-88178646	3	+	88177288	88177288	8553170	2	309,299,	0,1059,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	88177297	88178610	chr16:88177297-88178610	3	-	88177297	88177297	8553170	1	1313,	0,
#Deleted in new
chr16	88178048	88178941	chr16:88178048-88178941	1	-	88178048	88178048	8553170	2	598,158,	0,735,
#Deleted in new
chr16	88194280	88195217	chr16:88194280-88195217	3	+	88194280	88194280	789624	3	231,116,151,	0,469,786,
#Partially deleted in new
chr16	88234784	88302511	chr16:88234784-88302511	3	+	88234784	88234784	8553170	4	119,102,123,90,	0,41689,59934,67637,
#Deleted in new
chr16	88427470	88440757	chr16:88427470-88440757	3	+	88427470	88439332	789624	2	3179,10024,	0,3263,
#Deleted in new
chr16	88427470	88440749	chr16:88427470-88440749	1	+	88427470	88439332	789624	1	13279,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	88453316	88537016	chr16:88453316-88537016	3	+	88453638	88534979	0	10	362,105,123,134,103,207,234,96,147,3869,	0,32622,35714,61070,73497,74715,78685,79297,79472,79831,
#Partially deleted in new
chr16	88453605	88489349	chr16:88453605-88489349	0	+	88453605	88453605	8553170	3	73,105,319,	0,32333,35425,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	88453624	88516551	chr16:88453624-88516551	1	+	88453638	88516187	789624	6	54,105,123,134,121,26,	0,32314,35406,60762,62488,62901,
#Partially deleted in new
chr16	88453626	88516646	chr16:88453626-88516646	1	+	88453638	88516612	789624	5	52,105,123,134,88,	0,32312,35404,60760,62932,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	88453626	88516629	chr16:88453626-88516629	1	+	88453638	88516187	789624	4	52,105,134,517,	0,32312,60760,62486,
#Deleted in new
chr16	88468917	88469031	chr16:88468917-88469031	3	+	88468917	88468917	5263520	1	114,	0,
#Partially deleted in new
chr16	88512959	88531053	chr16:88512959-88531053	3	-	88512959	88512959	789624	4	344,100,167,122,	0,9061,17482,17972,
#Partially deleted in new
chr16	88570380	88631966	chr16:88570380-88631966	3	+	88577123	88631299	789624	18	186,617,85,149,93,158,118,269,192,126,105,144,66,161,200,97,97,866,	0,6729,16219,27797,28239,29410,38553,40887,51816,52838,53577,54221,54821,57241,57539,58377,60104,60720,
#Partially deleted in new
chr16	88570402	88631398	chr16:88570402-88631398	1	+	88577123	88631299	789624	19	164,617,85,72,149,93,158,118,269,192,126,105,144,66,161,200,97,97,298,	0,6707,16197,17139,27775,28217,29388,38531,40865,51794,52816,53555,54199,54799,57219,57517,58355,60082,60698,
#Partially deleted in new
chr16	88570477	88599802	chr16:88570477-88599802	0	+	88577123	88599802	789624	6	89,266,85,149,93,12,	0,6632,16122,27700,28142,29313,
#Partially deleted in new
chr16	88586616	88623270	chr16:88586616-88623270	0	+	88586616	88623270	789624	6	68,149,93,158,192,52,	0,11561,12003,13174,35580,36602,
#Partially deleted in new
chr16	88599835	88609264	chr16:88599835-88609264	0	+	88599835	88599835	8553170	2	113,331,	0,9098,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	88608516	88626699	chr16:88608516-88626699	0	+	88608516	88608516	8553170	5	535,269,1148,1204,1498,	0,2751,13680,15025,16685,
#Partially deleted in new
chr16	88624042	88631847	chr16:88624042-88631847	0	+	88624042	88631688	789624	4	20,144,47,176,	0,559,1159,7629,
#Deleted in new
chr16	88624687	88625684	chr16:88624687-88625684	0	+	88624687	88624687	8553170	2	58,483,	0,514,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	88627061	88631934	chr16:88627061-88631934	0	+	88627061	88627061	8553170	5	721,200,97,97,834,	0,858,1696,3423,4039,
#Partially deleted in new
chr16	88627921	88631930	chr16:88627921-88631930	0	+	88627921	88631299	789624	5	198,97,97,239,437,	0,836,2563,3179,3572,
#Partially deleted in new
chr16	88628647	88631424	chr16:88628647-88631424	0	+	88628647	88628647	8553170	3	207,97,324,	0,1837,2453,
#Deleted in new
chr16	88630154	88631256	chr16:88630154-88631256	0	+	88630154	88630154	8553170	2	427,156,	0,946,
#Deleted in new
chr16	88638590	88640122	chr16:88638590-88640122	0	+	88638590	88638590	8553170	2	719,309,	0,1223,
#Deleted in new
chr16	88638592	88640473	chr16:88638592-88640473	3	+	88638641	88640072	789624	3	55,329,660,	0,388,1221,
#Partially deleted in new
chr16	88643282	88651152	chr16:88643282-88651152	3	-	88643352	88651013	0	6	289,82,84,75,70,197,	0,2833,3472,3818,4762,7673,
#Partially deleted in new
chr16	88643513	88646825	chr16:88643513-88646825	0	-	88643513	88646825	789624	3	68,82,71,	0,2602,3241,
#Partially deleted in new
chr16	88643513	88651035	chr16:88643513-88651035	0	-	88643513	88643513	8553170	5	58,723,75,70,80,	0,2602,3587,4531,7442,
#Partially deleted in new
chr16	88643539	88650314	chr16:88643539-88650314	0	-	88643539	88650299	789624	6	32,82,84,75,70,62,	0,2576,3215,3561,4505,6713,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	88644741	88651041	chr16:88644741-88651041	1	-	88645165	88651013	789624	6	688,82,84,75,70,86,	0,1374,2013,2359,3303,6214,
#Partially deleted in new
chr16	88645086	88651030	chr16:88645086-88651030	1	-	88646097	88651013	789624	5	1111,84,75,70,75,	0,1668,2014,2958,5869,
#Partially deleted in new
chr16	88645964	88650988	chr16:88645964-88650988	0	-	88645964	88645964	8553170	4	874,75,70,33,	0,1136,2080,4991,
#Partially deleted in new
chr16	88646131	88651015	chr16:88646131-88651015	0	-	88646131	88651013	789624	6	66,84,84,75,70,60,	0,388,623,969,1913,4824,
#Partially deleted in new
chr16	88646140	88651031	chr16:88646140-88651031	0	-	88646140	88646140	8553170	4	57,421,70,76,	0,614,1904,4815,
#Partially deleted in new
chr16	88647692	88651054	chr16:88647692-88651054	0	-	88647692	88647692	8553170	3	247,118,99,	0,304,3263,
#Partially deleted in new
chr16	88651934	88663110	chr16:88651934-88663110	3	-	88652524	88663080	0	10	671,109,116,219,75,200,147,115,71,100,	0,1365,2757,3264,3721,4170,5501,5980,6715,11076,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	88651934	88657266	chr16:88651934-88657266	0	-	88651934	88651934	8553170	6	671,109,116,219,75,1162,	0,1365,2757,3264,3721,4170,
#Deleted in new
chr16	88652353	88653584	chr16:88652353-88653584	0	-	88652353	88652353	8553170	2	252,285,	0,946,
#Deleted in new
chr16	88652509	88654985	chr16:88652509-88654985	0	-	88652509	88652509	8553170	3	96,109,294,	0,790,2182,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	88655384	88663137	chr16:88655384-88663137	0	-	88655384	88663080	789624	8	33,75,200,102,147,115,71,127,	0,271,720,1761,2051,2530,3265,7626,
#Partially deleted in new
chr16	88655656	88663091	chr16:88655656-88663091	0	-	88658704	88663080	789624	7	74,200,147,115,71,70,81,	0,448,1779,2258,2993,7055,7354,
#Partially deleted in new
chr16	88655662	88663082	chr16:88655662-88663082	0	-	88657894	88663080	789624	6	68,200,147,295,71,72,	0,442,1773,2072,2987,7348,
#Partially deleted in new
chr16	88655833	88663094	chr16:88655833-88663094	0	-	88655833	88655833	8553170	5	471,147,115,71,84,	0,1602,2081,2816,7177,
#Partially deleted in new
chr16	88656104	88663029	chr16:88656104-88663029	0	-	88656104	88656104	8553170	5	457,147,115,71,19,	0,1331,1810,2545,6906,
#Partially deleted in new
chr16	88656120	88663065	chr16:88656120-88663065	0	-	88656120	88656120	8553170	4	184,594,71,55,	0,1315,2529,6890,
#Partially deleted in new
chr16	88656169	88658783	chr16:88656169-88658783	0	-	88656169	88656169	8553170	3	135,594,134,	0,1266,2480,
#Partially deleted in new
chr16	88656260	88657507	chr16:88656260-88657507	0	-	88656260	88656260	8553170	3	301,63,72,	0,534,1175,
#Partially deleted in new
chr16	88662101	88663161	chr16:88662101-88663161	0	-	88662101	88662101	8553170	2	66,151,	0,909,
#Partially deleted in new
chr16	88662114	88663046	chr16:88662114-88663046	0	-	88662114	88662114	8553170	3	53,196,36,	0,597,896,
#Partially deleted in new
chr16	88663297	88687186	chr16:88663297-88687186	3	+	88663297	88663297	789624	4	103,189,310,396,	0,7979,8515,23493,
#Partially deleted in new
chr16	88663334	88673647	chr16:88663334-88673647	1	+	88663334	88663334	8553170	4	66,417,302,44,	0,7942,8478,10269,
#Partially deleted in new
chr16	88663368	88672179	chr16:88663368-88672179	1	+	88663368	88663368	8553170	3	32,189,367,	0,7908,8444,
#Partially deleted in new
chr16	88663379	88675164	chr16:88663379-88675164	1	+	88663379	88663379	789624	4	21,189,310,1561,	0,7897,8433,10224,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	88673395	88675491	chr16:88673395-88675491	1	+	88673395	88673395	8553170	1	2096,	0,
#Partially deleted in new
chr16	88677681	88686493	chr16:88677681-88686493	3	-	88678447	88686406	789624	3	948,621,163,	0,3412,8649,
#Deleted in new
chr16	88685132	88687180	chr16:88685132-88687180	1	+	88685132	88685132	8553170	1	2048,	0,
#Partially deleted in new
chr16	88696494	88706421	chr16:88696494-88706421	3	-	88697567	88706325	789624	6	1139,108,115,113,157,251,	0,2007,2476,3125,4767,9676,
#Partially deleted in new
chr16	88696498	88706262	chr16:88696498-88706262	0	-	88696553	88706262	789624	4	140,113,157,92,	0,3121,4763,9672,
#Deleted in new
chr16	88696498	88699706	chr16:88696498-88699706	0	-	88696672	88699706	789624	3	211,15,87,	0,2572,3121,
#Deleted in new
chr16	88696500	88698610	chr16:88696500-88698610	3	+	88696500	88696500	8553170	2	143,70,	0,2040,
#Deleted in new
chr16	88696501	88700603	chr16:88696501-88700603	1	-	88697567	88699717	789624	5	1132,108,115,113,57,	0,2000,2469,3118,4045,
#Deleted in new
chr16	88696535	88703617	chr16:88696535-88703617	1	-	88697567	88699717	789624	6	1098,108,115,113,157,828,	0,1966,2435,3084,4726,6254,
#Deleted in new
chr16	88697295	88698183	chr16:88697295-88698183	0	-	88697295	88697295	8553170	2	338,250,	0,638,
#Deleted in new
chr16	88697393	88700056	chr16:88697393-88700056	1	-	88698324	88699717	789624	3	1216,115,437,	0,1577,2226,
#Partially deleted in new
chr16	88697478	88706398	chr16:88697478-88706398	1	-	88697567	88706325	789624	5	155,108,115,68,187,	0,1023,1492,2141,8733,
#Deleted in new
chr16	88700755	88701650	chr16:88700755-88701650	0	-	88700755	88700755	8553170	2	185,389,	0,506,
#Deleted in new
chr16	88701296	88703602	chr16:88701296-88703602	0	-	88701296	88701296	8553170	2	122,468,	0,1838,
#Deleted in new
chr16	88701316	88703241	chr16:88701316-88703241	0	-	88701316	88701316	8553170	2	102,469,	0,1456,
#Partially deleted in new
chr16	88706462	88715386	chr16:88706462-88715386	1	+	88706530	88715251	789624	15	136,75,79,60,61,110,284,136,132,92,104,151,67,59,205,	0,673,3475,3760,5172,5811,6159,6849,7184,7673,7920,8124,8397,8585,8719,
#Partially deleted in new
chr16	88706482	88715386	chr16:88706482-88715386	3	+	88706530	88715220	789624	14	116,75,79,60,61,110,284,136,132,92,104,151,67,205,	0,653,3455,3740,5152,5791,6139,6829,7164,7653,7900,8104,8377,8699,
#Partially deleted in new
chr16	88706482	88715320	chr16:88706482-88715320	0	+	88706530	88711641	789624	14	116,75,60,61,110,284,136,132,92,104,151,67,59,139,	0,653,3740,5152,5791,6139,6829,7164,7653,7900,8104,8377,8565,8699,
#Partially deleted in new
chr16	88706521	88715386	chr16:88706521-88715386	1	+	88706530	88715251	789624	15	77,75,79,60,61,323,284,136,132,92,104,151,67,59,205,	0,614,3416,3701,5113,5539,6100,6790,7125,7614,7861,8065,8338,8526,8660,
#Partially deleted in new
chr16	88706544	88710908	chr16:88706544-88710908	0	+	88706544	88706544	8553170	4	54,75,79,686,	0,591,3393,3678,
#Partially deleted in new
chr16	88706588	88712382	chr16:88706588-88712382	0	+	88709977	88712382	789624	5	622,79,60,61,109,	0,3349,3634,5046,5685,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	88708955	88710437	chr16:88708955-88710437	3	-	88708955	88708955	8553170	1	1482,	0,
#Deleted in new
chr16	88709958	88715386	chr16:88709958-88715386	0	+	88709958	88709958	8553170	12	58,60,61,110,284,136,132,92,355,67,59,205,	0,264,1676,2315,2663,3353,3688,4177,4424,4901,5089,5223,
#Deleted in new
chr16	88713479	88715364	chr16:88713479-88715364	0	+	88713479	88713479	8553170	6	299,92,104,151,67,183,	0,656,903,1107,1380,1702,
#Deleted in new
chr16	88714681	88715376	chr16:88714681-88715376	0	+	88714681	88715251	789624	3	56,67,329,	0,178,366,
#Deleted in new
chr16	88714984	88715383	chr16:88714984-88715383	0	+	88714984	88714984	8553170	2	122,202,	0,197,
#Partially deleted in new
chr16	88715337	88785220	chr16:88715337-88785220	3	-	88715604	88784964	789624	51	517,187,80,123,173,93,189,148,159,215,148,133,265,189,259,180,107,173,57,103,101,72,104,90,172,97,244,154,105,205,201,126,177,158,149,183,149,179,112,261,101,88,87,172,214,169,139,43,123,96,320,	0,595,860,1023,1221,1468,1685,4236,4464,4731,5047,5278,5828,6200,6470,6880,7245,7499,7757,7888,8533,9671,10078,10257,10946,11209,11377,11701,12219,16368,16997,17269,17940,18250,18568,19018,19312,19537,19797,20810,21301,22221,22390,22596,22889,23230,26140,26715,26962,34046,69563,
#Partially deleted in new
chr16	88715342	88719890	chr16:88715342-88719890	0	-	88717585	88719890	789624	10	512,149,80,123,173,93,189,79,148,89,	0,628,855,1018,1216,1463,1680,2194,4231,4459,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	88715345	88718741	chr16:88715345-88718741	0	-	88715345	88715345	8553170	7	509,187,80,123,173,93,1719,	0,587,852,1015,1213,1460,1677,
#Deleted in new
chr16	88715345	88716277	chr16:88715345-88716277	0	-	88715974	88716277	789624	4	509,45,23,80,	0,587,751,852,
#Deleted in new
chr16	88715448	88716212	chr16:88715448-88716212	0	-	88715448	88715448	8553170	2	406,280,	0,484,
#Deleted in new
chr16	88715490	88717611	chr16:88715490-88717611	1	-	88715614	88717611	789624	8	364,149,80,123,173,93,189,75,	0,480,707,870,1068,1315,1532,2046,
#Deleted in new
chr16	88715815	88716792	chr16:88715815-88716792	0	-	88715815	88715815	8553170	5	39,187,80,123,234,	0,117,382,545,743,
#Deleted in new
chr16	88716277	88716337	chr16:88716277-88716337	3	-	88716277	88716277	789624	1	60,	0,
#Partially deleted in new
chr16	88717022	88720473	chr16:88717022-88720473	0	-	88717022	88717022	8553170	4	189,148,159,405,	0,2551,2779,3046,
#Partially deleted in new
chr16	88717714	88720258	chr16:88717714-88720258	0	-	88717751	88720258	789624	4	94,148,159,190,	0,1859,2087,2354,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	88718614	88720459	chr16:88718614-88720459	3	+	88718614	88718614	8553170	1	1845,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	88718971	88720387	chr16:88718971-88720387	0	-	88718971	88718971	8553170	3	750,159,319,	0,830,1097,
#Deleted in new
chr16	88722522	88723934	chr16:88722522-88723934	0	-	88722522	88722522	8553170	5	167,173,57,103,64,	0,314,572,703,1348,
#Partially deleted in new
chr16	88722981	88726344	chr16:88722981-88726344	0	-	88722981	88726344	789624	7	28,57,103,101,104,90,61,	0,113,244,889,2434,2613,3302,
#Partially deleted in new
chr16	88723946	88726025	chr16:88723946-88726025	0	-	88723946	88723946	8553170	3	25,104,431,	0,1469,1648,
#Deleted in new
chr16	88727054	88727843	chr16:88727054-88727843	0	-	88727054	88727054	8553170	2	138,287,	0,502,
#Deleted in new
chr16	88731179	88739188	chr16:88731179-88739188	3	+	88731179	88731179	789624	3	269,585,685,	0,6641,7324,
#Deleted in new
chr16	88732463	88732980	chr16:88732463-88732980	0	-	88732463	88732463	8553170	2	72,374,	0,143,
#Deleted in new
chr16	88736799	88741425	chr16:88736799-88741425	1	+	88736799	88736799	8553170	2	1606,2922,	0,1704,
#Deleted in new
chr16	88741630	88742367	chr16:88741630-88742367	3	+	88741630	88741630	8553170	2	103,455,	0,282,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	88742766	88745748	chr16:88742766-88745748	3	+	88742766	88742766	789624	3	724,753,660,	0,825,2322,
#Deleted in new
chr16	88742820	88745464	chr16:88742820-88745464	0	+	88742820	88742820	8553170	2	1524,376,	0,2268,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	88803212	88809258	chr16:88803212-88809258	3	+	88803831	88808278	0	10	847,123,137,198,146,101,189,153,202,1144,	0,1332,1549,2227,2511,2808,3273,3838,4068,4902,
#Deleted in new
chr16	88804610	88806217	chr16:88804610-88806217	0	+	88804610	88804610	8553170	5	57,137,198,146,197,	0,151,829,1113,1410,
#Deleted in new
chr16	88805767	88807342	chr16:88805767-88807342	0	+	88805767	88807342	789624	5	102,101,153,153,62,	0,253,718,1283,1513,
#Partially deleted in new
chr16	88809338	88811944	chr16:88809338-88811944	3	-	88809697	88811899	0	5	502,79,134,107,125,	0,731,1084,2211,2481,
#Partially deleted in new
chr16	88809410	88811923	chr16:88809410-88811923	0	-	88809410	88811899	789624	4	125,134,107,104,	0,1012,2139,2409,
#Partially deleted in new
chr16	88809468	88811925	chr16:88809468-88811925	1	-	88809701	88811899	0	5	238,79,134,107,106,	0,601,954,2081,2351,
#Deleted in new
chr16	88809468	88810268	chr16:88809468-88810268	0	-	88809468	88809468	8553170	2	238,199,	0,601,
#Partially deleted in new
chr16	88809468	88811928	chr16:88809468-88811928	0	-	88810143	88811899	789624	4	372,79,107,109,	0,601,2081,2351,
#Partially deleted in new
chr16	88809468	88811937	chr16:88809468-88811937	0	-	88810143	88811899	789624	4	238,79,107,118,	0,601,2081,2351,
#Partially deleted in new
chr16	88809471	88811920	chr16:88809471-88811920	1	-	88809697	88811899	789624	4	369,79,160,101,	0,598,2025,2348,
#Partially deleted in new
chr16	88809517	88811897	chr16:88809517-88811897	0	-	88809818	88811897	789624	5	390,79,134,107,78,	0,552,905,2032,2302,
#Deleted in new
chr16	88809679	88810398	chr16:88809679-88810398	0	-	88809679	88809679	8553170	2	161,329,	0,390,
#Partially deleted in new
chr16	88809735	88811880	chr16:88809735-88811880	0	-	88809735	88809735	8553170	3	105,79,331,	0,334,1814,
#Deleted in new
chr16	88811173	88811920	chr16:88811173-88811920	0	-	88811173	88811173	8553170	2	483,101,	0,646,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr16	88813733	88856966	chr16:88813733-88856966	3	-	88814438	88856877	0	14	792,118,122,103,137,104,140,125,67,144,103,75,124,209,	0,4273,8855,11033,12968,18264,21479,21991,22467,23888,27258,28163,28972,43024,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	88813734	88845624	chr16:88813734-88845624	0	-	88813734	88813734	8553170	12	791,118,122,103,137,104,140,125,67,144,103,3728,	0,4272,8854,11032,12967,18263,21478,21990,22466,23887,27257,28162,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	88813735	88856826	chr16:88813735-88856826	0	-	88841028	88856826	789624	12	790,118,122,103,137,104,140,125,67,103,75,69,	0,4271,8853,11031,12966,18262,21477,21989,22465,27256,28161,43022,
#Partially deleted in new
chr16	88814322	88856826	chr16:88814322-88856826	0	-	88843112	88856826	789624	15	203,118,122,103,137,104,140,125,67,144,103,75,124,170,69,	0,3684,8266,10444,12379,17675,20890,21402,21878,23299,26669,27574,28383,28707,42435,
#Deleted in new
chr16	88824788	88827116	chr16:88824788-88827116	0	-	88824788	88824788	8553170	2	81,415,	0,1913,
#Partially deleted in new
chr16	88832033	88837849	chr16:88832033-88837849	0	-	88832033	88832033	8553170	6	68,140,125,67,144,10,	0,3179,3691,4167,5588,5806,
#Partially deleted in new
chr16	88835728	88837889	chr16:88835728-88837889	0	-	88835728	88835728	8553170	3	121,67,268,	0,472,1893,
#Partially deleted in new
chr16	88835754	88856575	chr16:88835754-88856575	0	-	88835754	88856478	789624	6	95,67,144,103,75,125,	0,446,1867,5237,6142,20696,
#Partially deleted in new
chr16	88836240	88838922	chr16:88836240-88838922	0	-	88836240	88836240	8553170	3	27,144,378,	0,1381,2304,
#Partially deleted in new
chr16	88840334	88856842	chr16:88840334-88856842	0	-	88840334	88840334	8553170	6	518,103,75,124,170,85,	0,657,1562,2371,2695,16423,
#Deleted in new
chr16	88840697	88842045	chr16:88840697-88842045	0	-	88840697	88840697	8553170	2	397,149,	0,1199,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	88855127	88856970	chr16:88855127-88856970	1	-	88855386	88856877	789624	3	395,95,213,	0,1079,1630,
#Deleted in new
chr16	88855752	88856931	chr16:88855752-88856931	1	-	88856184	88856877	789624	2	549,174,	0,1005,
#Deleted in new
chr16	88856219	88861415	chr16:88856219-88861415	1	+	88859699	88860959	789624	6	27,171,99,178,80,505,	0,2399,3125,3353,3673,4691,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	88857085	88862686	chr16:88857085-88862686	3	+	88857150	88860959	789624	5	98,173,88,80,1776,	0,1533,2577,2807,3825,
#Deleted in new
chr16	88857085	88861351	chr16:88857085-88861351	1	+	88858675	88860959	789624	5	98,150,88,80,438,	0,1556,2577,2807,3828,
#Deleted in new
chr16	88857097	88859512	chr16:88857097-88859512	0	+	88857097	88857097	8553170	2	86,894,	0,1521,
#Deleted in new
chr16	88857097	88859368	chr16:88857097-88859368	1	+	88857150	88859368	789624	3	86,171,24,	0,1521,2247,
#Deleted in new
chr16	88857126	88859729	chr16:88857126-88859729	0	+	88857150	88857264	789624	3	325,150,67,	0,1515,2536,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	88857126	88862676	chr16:88857126-88862676	1	+	88857150	88860324	789624	4	57,173,88,2784,	0,1492,2536,2766,
#Deleted in new
chr16	88857130	88861287	chr16:88857130-88861287	0	+	88857150	88859368	789624	5	53,171,406,80,374,	0,1488,2214,2762,3783,
#Deleted in new
chr16	88857134	88861112	chr16:88857134-88861112	1	+	88857150	88860959	789624	4	49,171,80,199,	0,1484,2758,3779,
#Deleted in new
chr16	88857140	88861309	chr16:88857140-88861309	1	+	88857150	88860959	789624	5	43,173,88,80,417,	0,1478,2522,2752,3752,
#Deleted in new
chr16	88857143	88861110	chr16:88857143-88861110	0	+	88857150	88859368	789624	5	40,171,406,80,218,	0,1475,2201,2749,3749,
#Deleted in new
chr16	88857167	88861049	chr16:88857167-88861049	1	+	88858703	88860959	789624	5	16,148,178,80,136,	0,1474,2405,2725,3746,
#Deleted in new
chr16	88858616	88860186	chr16:88858616-88860186	0	+	88858616	88858616	8553170	2	175,524,	0,1046,
#Deleted in new
chr16	88859300	88861105	chr16:88859300-88861105	0	+	88859300	88859300	8553170	3	450,80,192,	0,592,1613,
#Deleted in new
chr16	88859770	88861130	chr16:88859770-88861130	0	+	88859770	88859770	8553170	2	202,217,	0,1143,
#Deleted in new
chr16	88863332	88866618	chr16:88863332-88866618	3	-	88863755	88866606	789624	7	463,143,88,107,68,136,267,	0,904,1520,1689,2230,2473,3019,
#Deleted in new
chr16	88863685	88866660	chr16:88863685-88866660	1	-	88863736	88866606	789624	6	110,143,107,68,136,309,	0,551,1336,1877,2120,2666,
#Deleted in new
chr16	88863685	88866660	chr16:88863685-88866660	0	-	88863685	88866606	789624	6	110,143,88,68,136,309,	0,551,1167,1877,2120,2666,
#Partially deleted in new
chr16	88874857	88977204	chr16:88874857-88977204	3	-	88876975	88976807	789624	12	2418,191,69,199,86,224,182,90,242,75,153,548,	0,4412,5862,6433,7818,10188,11103,17024,17386,23220,26646,101799,
#Partially deleted in new
chr16	88874857	88941198	chr16:88874857-88941198	1	-	88876975	88901624	789624	11	2418,191,69,199,86,224,182,90,242,153,179,	0,4412,5862,6433,7818,10188,11103,17024,17386,26646,66162,
#Partially deleted in new
chr16	88875524	88881157	chr16:88875524-88881157	0	-	88875524	88875524	8553170	3	1751,191,438,	0,3745,5195,
#Partially deleted in new
chr16	88876227	88880036	chr16:88876227-88880036	0	-	88876227	88876227	8553170	2	1048,767,	0,3042,
#Deleted in new
chr16	88879429	88881313	chr16:88879429-88881313	0	-	88881068	88881313	789624	4	31,69,161,23,	0,1290,1558,1861,
#Deleted in new
chr16	88881037	88883919	chr16:88881037-88883919	0	+	88881037	88881037	8553170	2	127,405,	0,2477,
#Partially deleted in new
chr16	88881111	88941809	chr16:88881111-88941809	0	-	88881111	88901624	789624	10	37,199,86,224,182,90,242,75,153,39,	0,179,1564,3934,4849,10770,11132,16966,20392,60659,
#Deleted in new
chr16	88881256	88883715	chr16:88881256-88883715	0	+	88881256	88881256	8553170	2	356,201,	0,2258,
#Deleted in new
chr16	88881454	88883926	chr16:88881454-88883926	0	+	88881454	88881454	8553170	2	166,412,	0,2060,
#Deleted in new
chr16	88883271	88887136	chr16:88883271-88887136	3	+	88883271	88883271	789624	3	947,224,1395,	0,1349,2470,
#Partially deleted in new
chr16	88892243	88941844	chr16:88892243-88941844	0	-	88892243	88901624	789624	3	242,153,74,	0,9260,49527,
#Partially deleted in new
chr16	88892284	88902515	chr16:88892284-88902515	0	-	88892284	88901624	789624	4	201,75,153,110,	0,5793,9219,10121,
#Partially deleted in new
chr16	88892398	88977080	chr16:88892398-88977080	0	-	88892398	88976807	789624	3	87,153,424,	0,9105,84258,
#Partially deleted in new
chr16	88898087	88941200	chr16:88898087-88941200	0	-	88898087	88901624	789624	3	65,153,181,	0,3416,42932,
#Partially deleted in new
chr16	88901557	88957775	chr16:88901557-88957775	0	-	88901557	88901624	789624	2	99,185,	0,56033,
#Deleted in new
chr16	88936778	88937756	chr16:88936778-88937756	1	-	88936778	88936778	8553170	2	360,171,	0,807,
#Deleted in new
chr16	88936778	88939651	chr16:88936778-88939651	3	-	88936778	88936778	8553170	1	2873,	0,
#Partially deleted in new
chr16	88939788	88951524	chr16:88939788-88951524	3	+	88939788	88939788	8553170	2	544,1268,	0,10468,
#Partially deleted in new
chr16	88984031	88995369	chr16:88984031-88995369	3	+	88984031	88984031	8553170	3	89,199,184,	0,7999,11154,
#Deleted in new
chr16	89046171	89052965	chr16:89046171-89052965	3	-	89046171	89046171	8553170	2	1649,505,	0,6289,
#Partially deleted in new
chr16	89088374	89114473	chr16:89088374-89114473	0	+	89102732	89114473	789624	4	104,156,155,135,	0,14229,23717,25964,
#Partially deleted in new
chr16	89093808	89155763	chr16:89093808-89155763	1	+	89100681	89154207	789624	11	184,173,686,156,155,149,113,127,135,112,1674,	0,4782,6853,8795,18283,20530,26992,39327,51458,52129,60281,
#Partially deleted in new
chr16	89093808	89155846	chr16:89093808-89155846	3	+	89100681	89154207	789624	11	188,173,686,156,155,149,113,127,135,112,1757,	0,4782,6853,8795,18283,20530,26992,39327,51458,52129,60281,
#Partially deleted in new
chr16	89093854	89102648	chr16:89093854-89102648	0	+	89100681	89102648	789624	3	138,686,45,	0,6807,8749,
#Partially deleted in new
chr16	89093867	89133262	chr16:89093867-89133262	0	+	89102732	89133262	789624	6	129,156,155,149,113,127,	0,8736,18224,20471,26933,39268,
#Partially deleted in new
chr16	89093882	89154589	chr16:89093882-89154589	1	+	89100681	89154207	789624	10	114,686,156,155,149,113,127,135,112,500,	0,6779,8721,18209,20456,26918,39253,51384,52055,60207,
#Partially deleted in new
chr16	89093897	89154588	chr16:89093897-89154588	1	+	89102732	89154207	789624	9	95,156,155,149,113,127,135,112,499,	0,8706,18194,20441,26903,39238,51369,52040,60192,
#Partially deleted in new
chr16	89093903	89100767	chr16:89093903-89100767	0	+	89100681	89100767	789624	4	89,109,173,106,	0,1291,4687,6758,
#Partially deleted in new
chr16	89098710	89154540	chr16:89098710-89154540	0	+	89100681	89133152	789624	9	53,722,156,155,113,127,135,112,451,	0,1915,3893,13381,22090,34425,46556,47227,55379,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	89100661	89164121	chr16:89100661-89164121	0	+	89100681	89154207	8553170	13	686,156,155,149,97,113,113,127,135,112,3361,175,1000,	0,1942,11430,13677,16328,16559,20139,32474,44605,45276,53428,58554,62460,
#Partially deleted in new
chr16	89102351	89145400	chr16:89102351-89145400	0	+	89102732	89145400	789624	7	49,156,155,149,113,127,134,	0,252,9740,11987,18449,30784,42915,
#Partially deleted in new
chr16	89102612	89122392	chr16:89102612-89122392	0	+	89102612	89122392	789624	4	147,155,113,19,	0,9479,18188,19761,
#Partially deleted in new
chr16	89102695	89122832	chr16:89102695-89122832	0	+	89102695	89122442	789624	5	64,155,149,113,459,	0,9396,11643,18105,19678,
#Partially deleted in new
chr16	89112200	89146044	chr16:89112200-89146044	0	+	89112200	89112200	8553170	5	46,113,127,188,107,	0,8600,20935,33013,33737,
#Partially deleted in new
chr16	89113174	89115279	chr16:89113174-89115279	3	-	89113174	89113174	8553170	1	2105,	0,
#Partially deleted in new
chr16	89136547	89155846	chr16:89136547-89155846	0	+	89136547	89136547	789624	5	282,210,135,112,1757,	0,4519,8719,9390,17542,
#Partially deleted in new
chr16	89145160	89154584	chr16:89145160-89154584	0	+	89145160	89145160	8553170	3	241,112,495,	0,777,8929,
#Partially deleted in new
chr16	89145949	89151348	chr16:89145949-89151348	0	+	89145949	89151247	789624	2	100,321,	0,5078,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	89147566	89154586	chr16:89147566-89154586	0	+	89147566	89147566	8553170	1	7020,	0,
#Deleted in new
chr16	89150599	89151222	chr16:89150599-89151222	0	+	89150599	89150599	8553170	2	311,195,	0,428,
#Deleted in new
chr16	89159145	89160562	chr16:89159145-89160562	1	+	89159145	89159145	8553170	2	245,850,	0,567,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	89159219	89163675	chr16:89159219-89163675	3	+	89159219	89159219	789624	4	171,174,1344,554,	0,488,996,3902,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	89162381	89164245	chr16:89162381-89164245	1	+	89162381	89162381	8553170	1	1864,	0,
#Deleted in new
chr16	89166382	89169147	chr16:89166382-89169147	3	+	89166382	89166382	789624	3	117,170,1039,	0,754,1726,
#Partially deleted in new
chr16	89171766	89195492	chr16:89171766-89195492	3	+	89171831	89195155	789624	14	107,159,156,145,161,129,186,254,143,240,240,137,159,631,	0,7649,8433,11781,13406,15662,16333,18476,19563,19888,20438,21703,21988,23095,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	89171766	89183605	chr16:89171766-89183605	0	+	89171766	89171766	8553170	3	107,159,980,	0,7649,10859,
#Partially deleted in new
chr16	89171766	89186192	chr16:89171766-89186192	0	+	89171766	89171766	8553170	5	107,159,156,145,1020,	0,7649,8433,11781,13406,
#Partially deleted in new
chr16	89195760	89201664	chr16:89195760-89201664	3	-	89195998	89201664	789624	10	545,112,215,109,146,169,155,104,108,246,	0,1537,2361,2681,2891,3262,3652,3952,5349,5658,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	89195760	89200121	chr16:89195760-89200121	1	-	89195998	89199150	789624	8	545,112,215,109,146,169,155,409,	0,1537,2361,2681,2891,3262,3652,3952,
#Partially deleted in new
chr16	89196150	89198840	chr16:89196150-89198840	0	-	89196150	89196150	8553170	5	155,112,215,109,189,	0,1147,1971,2291,2501,
#Partially deleted in new
chr16	89196346	89198867	chr16:89196346-89198867	0	-	89196346	89196346	8553170	5	40,112,215,109,216,	0,951,1775,2095,2305,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	89199104	89200121	chr16:89199104-89200121	0	-	89199104	89199104	8553170	3	87,155,409,	0,308,608,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	89199411	89200318	chr16:89199411-89200318	0	-	89199411	89199411	8553170	2	244,547,	0,360,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	89215210	89217653	chr16:89215210-89217653	3	-	89215210	89215210	8553170	1	2443,	0,
#Partially deleted in new
chr16	89217702	89229557	chr16:89217702-89229557	1	+	89221127	89228562	789624	7	208,156,92,127,84,77,2864,	0,3294,4389,5454,7016,7852,8991,
#Partially deleted in new
chr16	89217709	89223282	chr16:89217709-89223282	0	+	89221127	89223282	789624	4	201,149,92,126,	0,3294,4382,5447,
#Deleted in new
chr16	89217709	89218307	chr16:89217709-89218307	0	+	89217709	89217709	8553170	2	201,66,	0,532,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	89217709	89237071	chr16:89217709-89237071	3	+	89221127	89228562	789624	6	201,156,92,127,77,10378,	0,3287,4382,5447,7845,8984,
#Partially deleted in new
chr16	89221071	89227790	chr16:89221071-89227790	0	+	89221127	89224745	789624	5	81,92,84,77,1097,	0,1020,3647,4483,5622,
#Partially deleted in new
chr16	89221075	89228714	chr16:89221075-89228714	1	+	89223249	89228562	789624	5	77,127,84,77,2021,	0,2081,3643,4479,5618,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	89224633	89226778	chr16:89224633-89226778	0	+	89224633	89224633	8553170	3	169,77,85,	0,921,2060,
#Deleted in new
chr16	89226806	89228692	chr16:89226806-89228692	3	-	89226806	89226806	8553170	2	168,235,	0,1651,
#Partially deleted in new
chr16	89267618	89490561	chr16:89267618-89490561	1	-	89268477	89317019	789624	13	1045,93,144,99,6578,148,143,204,171,139,146,85,317,	0,3198,7195,7474,11453,18420,20909,23006,23394,37587,49314,150665,222626,
#Partially deleted in new
chr16	89267629	89490320	chr16:89267629-89490320	1	-	89268477	89317019	789624	14	1034,93,144,99,6578,148,143,204,171,139,146,85,71,76,	0,3187,7184,7463,11442,18409,20898,22995,23383,37576,49303,150654,163626,222615,
#Partially deleted in new
chr16	89267700	89317019	chr16:89267700-89317019	0	-	89268477	89317019	789624	9	963,93,144,99,143,204,171,139,87,	0,3116,7113,7392,20827,22924,23312,37505,49232,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	89268103	89273044	chr16:89268103-89273044	3	+	89268103	89268103	8553170	2	554,3106,	0,1835,
#Partially deleted in new
chr16	89268121	89490319	chr16:89268121-89490319	0	-	89291709	89317019	789624	14	542,93,144,99,6578,148,143,204,171,97,139,143,85,75,	0,2695,6692,6971,10950,17917,20406,22503,22891,23559,37084,48811,150162,222123,
#Partially deleted in new
chr16	89268121	89490479	chr16:89268121-89490479	1	-	89268477	89317019	789624	13	542,93,144,99,6578,148,143,204,171,139,143,85,235,	0,2695,6692,6971,10950,17917,20406,22503,22891,37084,48811,150162,222123,
#Partially deleted in new
chr16	89268532	89288678	chr16:89268532-89288678	0	-	89268532	89268532	8553170	5	131,93,144,99,151,	0,2284,6281,6560,19995,
#Deleted in new
chr16	89274734	89275118	chr16:89274734-89275118	0	-	89274734	89274734	8553170	2	223,26,	0,358,
#Deleted in new
chr16	89277477	89279716	chr16:89277477-89279716	0	-	89277477	89277477	8553170	1	2239,	0,
#Partially deleted in new
chr16	89283332	89418305	chr16:89283332-89418305	0	-	89283332	89317019	789624	6	2317,148,143,139,146,22,	0,2706,5195,21873,33600,134951,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	89284263	89290656	chr16:89284263-89290656	0	-	89284263	89284263	8553170	3	1386,2632,32,	0,1775,6361,
#Partially deleted in new
chr16	89284505	89305239	chr16:89284505-89305239	0	-	89284505	89284505	8553170	5	1144,148,143,559,34,	0,1533,4022,6119,20700,
#Partially deleted in new
chr16	89285165	89288977	chr16:89285165-89288977	0	-	89285165	89285165	8553170	3	484,148,450,	0,873,3362,
#Partially deleted in new
chr16	89285174	89490318	chr16:89285174-89490318	3	-	89285439	89317019	789624	10	388,86,148,143,204,171,139,146,85,74,	0,389,864,3353,5450,5838,20031,31758,133109,205070,
#Partially deleted in new
chr16	89286120	89490320	chr16:89286120-89490320	0	-	89286120	89286120	8553170	5	66,139,143,85,76,	0,19085,30812,132163,204124,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	89286656	89418312	chr16:89286656-89418312	0	-	89291709	89317019	789624	7	2014,204,171,97,139,143,29,	0,3968,4356,5024,18549,30276,131627,
#Partially deleted in new
chr16	89286660	89490525	chr16:89286660-89490525	0	-	89313568	89317019	789624	10	453,143,204,171,97,139,273,146,85,281,	0,1867,3964,4352,5020,18545,26656,30272,131623,203584,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	89286668	89418364	chr16:89286668-89418364	1	-	89288467	89317019	789624	6	2002,204,171,139,143,81,	0,3956,4344,18537,30264,131615,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	89286672	89490302	chr16:89286672-89490302	1	-	89288467	89317019	789624	7	1998,204,171,139,146,85,58,	0,3952,4340,18533,30260,131611,203572,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	89286718	89490321	chr16:89286718-89490321	0	-	89291709	89317019	789624	8	1952,204,171,97,139,146,85,77,	0,3906,4294,4962,18487,30214,131565,203526,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	89286742	89343823	chr16:89286742-89343823	1	-	89288467	89317019	789624	6	1928,204,171,139,143,141,	0,3882,4270,18463,30190,56940,
#Partially deleted in new
chr16	89287650	89373485	chr16:89287650-89373485	1	-	89288467	89317019	789624	8	1020,204,171,139,143,66,163,138,	0,2974,3362,17555,29282,83024,85321,85697,
#Partially deleted in new
chr16	89287992	89490274	chr16:89287992-89490274	1	-	89288178	89317019	789624	8	261,143,204,171,139,146,85,30,	0,535,2632,3020,17213,28940,130291,202252,
#Partially deleted in new
chr16	89288535	89490320	chr16:89288535-89490320	0	-	89291039	89317019	789624	8	135,204,171,119,139,146,85,76,	0,2089,2477,3145,16670,28397,129748,201709,
#Partially deleted in new
chr16	89290971	89313436	chr16:89290971-89313436	0	-	89290971	89290971	8553170	3	212,139,120,	0,14234,22345,
#Partially deleted in new
chr16	89291037	89490293	chr16:89291037-89490293	0	-	89291037	89418292	789624	5	146,139,85,71,49,	0,14168,127246,140218,199207,
#Partially deleted in new
chr16	89291688	89490275	chr16:89291688-89490275	0	-	89291688	89291688	8553170	5	111,139,143,85,31,	0,13517,25244,126595,198556,
#Partially deleted in new
chr16	89291706	89490320	chr16:89291706-89490320	0	-	89291706	89305232	789624	4	71,139,85,76,	0,13499,126577,198538,
#Partially deleted in new
chr16	89291727	89489193	chr16:89291727-89489193	0	-	89291727	89291727	8553170	5	50,139,143,85,156,	0,13478,25205,126556,197310,
#Deleted in new
chr16	89296127	89298316	chr16:89296127-89298316	3	+	89296127	89296127	789624	3	637,772,166,	0,1063,2023,
#Deleted in new
chr16	89297507	89298317	chr16:89297507-89298317	0	+	89297507	89297507	8553170	2	243,167,	0,643,
#Partially deleted in new
chr16	89298867	89320356	chr16:89298867-89320356	1	-	89300813	89317019	789624	4	2095,139,143,381,	0,6338,18065,21108,
#Partially deleted in new
chr16	89300119	89316998	chr16:89300119-89316998	0	-	89300839	89316998	789624	2	843,66,	0,16813,
#Partially deleted in new
chr16	89300235	89418368	chr16:89300235-89418368	1	-	89300813	89317019	789624	4	727,139,146,85,	0,4970,16697,118048,
#Partially deleted in new
chr16	89300644	89313585	chr16:89300644-89313585	0	-	89313568	89313585	8553170	2	318,269,	0,12672,
#Partially deleted in new
chr16	89300695	89328986	chr16:89300695-89328986	1	-	89300813	89317019	789624	4	267,139,143,44,	0,4510,16237,28247,
#Partially deleted in new
chr16	89300765	89339970	chr16:89300765-89339970	1	-	89300813	89317019	789624	4	197,139,143,101,	0,4440,16167,39104,
#Partially deleted in new
chr16	89301323	89490319	chr16:89301323-89490319	1	-	89301595	89317019	789624	5	313,139,146,85,75,	0,3882,15609,116960,188921,
#Partially deleted in new
chr16	89305099	89490286	chr16:89305099-89490286	0	-	89305099	89305099	8553170	4	245,146,85,42,	0,11833,113184,185145,
#Partially deleted in new
chr16	89305262	89313548	chr16:89305262-89313548	0	-	89305262	89305262	8553170	2	82,198,	0,8088,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	89321132	89325110	chr16:89321132-89325110	3	+	89321132	89321132	8553170	3	95,235,875,	0,1966,3103,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	89323223	89324923	chr16:89323223-89324923	0	+	89323223	89323223	8553170	3	110,155,688,	0,542,1012,
#Partially deleted in new
chr16	89360540	89418499	chr16:89360540-89418499	0	-	89360540	89360540	8553170	5	204,183,365,114,216,	0,954,35156,51909,57743,
#Partially deleted in new
chr16	89361516	89490320	chr16:89361516-89490320	0	-	89361516	89361516	8553170	3	161,85,76,	0,56767,128728,
#Partially deleted in new
chr16	89372853	89490320	chr16:89372853-89490320	0	-	89372853	89372853	8553170	3	281,85,76,	0,45430,117391,
#Partially deleted in new
chr16	89392375	89412563	chr16:89392375-89412563	0	-	89392375	89392375	8553170	2	304,114,	0,20074,
#Partially deleted in new
chr16	89403625	89490322	chr16:89403625-89490322	0	-	89403625	89403625	8553170	4	135,94,85,78,	0,8824,14658,86619,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	89420074	89422226	chr16:89420074-89422226	3	-	89420074	89420074	8553170	2	350,65,	0,2087,
#Deleted in new
chr16	89443317	89443424	chr16:89443317-89443424	3	+	89443317	89443317	8553170	1	107,	0,
#Deleted in new
chr16	89458869	89459437	chr16:89458869-89459437	7	+	89458869	89458869	16724991	1	568,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	89490718	89498685	chr16:89490718-89498685	0	+	89490718	89490718	8553170	3	232,87,600,	0,712,7367,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	89490914	89498685	chr16:89490914-89498685	0	+	89490914	89490914	8553170	4	36,87,98,600,	0,516,5187,7171,
#Partially deleted in new
chr16	89490916	89557748	chr16:89490916-89557748	3	+	89524037	89557093	789624	17	470,103,90,242,140,103,126,163,174,125,103,111,116,157,167,78,862,	0,19573,22031,33089,35412,38560,39766,40987,41546,53731,55741,57086,59577,62062,62877,63569,65970,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	89490954	89499285	chr16:89490954-89499285	0	+	89490954	89490954	8553170	2	432,1200,	0,7131,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	89491186	89498685	chr16:89491186-89498685	0	+	89491186	89491186	8553170	2	331,600,	0,6899,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	89492016	89504460	chr16:89492016-89504460	3	-	89492016	89492016	8553170	2	617,254,	0,12190,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	89492402	89493793	chr16:89492402-89493793	1	-	89492402	89492402	8553170	3	231,100,74,	0,1095,1317,
#Partially deleted in new
chr16	89507501	89557748	chr16:89507501-89557748	1	+	89507689	89557093	789624	17	239,103,90,242,140,103,126,163,174,125,103,111,116,157,167,78,862,	0,2988,5446,16504,18827,21975,23181,24402,24961,37146,39156,40501,42992,45477,46292,46984,49385,
#Partially deleted in new
chr16	89508121	89557768	chr16:89508121-89557768	1	+	89508417	89557093	0	17	479,103,90,242,140,103,126,163,174,125,103,111,116,157,167,78,882,	0,2368,4826,15884,18207,21355,22561,23782,24341,36526,38536,39881,42372,44857,45672,46364,48765,
#Partially deleted in new
chr16	89508366	89557272	chr16:89508366-89557272	1	+	89508417	89557093	789624	16	234,103,90,242,140,103,126,163,174,125,103,116,157,167,78,386,	0,2123,4581,15639,17962,21110,22316,23537,24096,36281,38291,42127,44612,45427,46119,48520,
#Partially deleted in new
chr16	89508392	89537226	chr16:89508392-89537226	1	+	89508417	89536981	789624	10	208,103,90,242,140,103,126,163,174,445,	0,2097,4555,15613,17936,21084,22290,23511,24070,28389,
#Partially deleted in new
chr16	89508393	89530780	chr16:89508393-89530780	0	+	89508417	89530780	789624	5	207,103,90,242,98,	0,2096,4554,15612,22289,
#Partially deleted in new
chr16	89508394	89557747	chr16:89508394-89557747	0	+	89508417	89541011	789624	19	206,103,90,242,140,103,126,142,174,84,1127,125,103,111,116,157,167,78,861,	0,2095,4553,15611,17934,21082,22288,23530,24068,32549,32758,36253,38263,39608,42099,44584,45399,46091,48492,
#Partially deleted in new
chr16	89508396	89557739	chr16:89508396-89557739	1	+	89508417	89557093	789624	14	204,103,90,242,140,103,126,103,111,116,157,167,78,853,	0,2093,4551,15609,17932,21080,22286,38261,39606,42097,44582,45397,46089,48490,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr16	89508400	89557750	chr16:89508400-89557750	0	+	89508417	89523601	789624	18	200,103,90,765,140,266,103,126,163,174,125,103,111,116,157,167,78,864,	0,2089,4547,15082,17928,18357,21076,22282,23503,24062,36247,38257,39602,42093,44578,45393,46085,48486,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr16	89508400	89557747	chr16:89508400-89557747	0	+	89508400	89508400	8553170	17	200,103,90,242,140,103,126,163,174,125,103,111,116,157,167,1600,861,	0,2089,4547,15605,17928,21076,22282,23503,24062,36247,38257,39602,42093,44578,45393,46085,48486,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	89508402	89514571	chr16:89508402-89514571	0	+	89508402	89508402	8553170	4	198,103,90,226,	0,2087,4545,5943,
#Partially deleted in new
chr16	89508402	89557747	chr16:89508402-89557747	0	+	89508417	89529153	789624	14	198,103,90,242,140,390,126,103,111,116,157,167,78,861,	0,2087,4545,15603,17926,20732,22280,38255,39600,42091,44576,45391,46083,48484,
#Partially deleted in new
chr16	89508402	89557747	chr16:89508402-89557747	1	+	89508417	89557093	789624	17	198,103,90,242,140,103,126,163,174,125,103,111,116,112,167,78,861,	0,2087,4545,15603,17926,21074,22280,23501,24060,36245,38255,39600,42091,44621,45391,46083,48484,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr16	89508402	89557747	chr16:89508402-89557747	0	+	89508417	89528710	789624	18	198,103,90,242,140,893,126,163,174,441,125,103,111,116,157,167,78,861,	0,2087,4545,15603,17926,20229,22280,23501,24060,32541,36245,38255,39600,42091,44576,45391,46083,48484,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr16	89508402	89557747	chr16:89508402-89557747	0	+	89508417	89545958	789624	18	198,103,90,242,140,103,126,163,174,125,310,103,111,116,157,167,78,861,	0,2087,4545,15603,17926,21074,22280,23501,24060,36245,37469,38255,39600,42091,44576,45391,46083,48484,
#Partially deleted in new
chr16	89508402	89557748	chr16:89508402-89557748	1	+	89508417	89556927	789624	18	198,103,90,242,140,103,126,163,174,125,103,111,116,157,167,78,208,862,	0,2087,4545,15603,17926,21074,22280,23501,24060,36245,38255,39600,42091,44576,45391,46083,47475,48484,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	89508402	89557755	chr16:89508402-89557755	0	+	89508402	89508402	8553170	16	198,103,90,242,140,1332,163,174,125,103,111,116,157,167,78,869,	0,2087,4545,15603,17926,21074,23501,24060,36245,38255,39600,42091,44576,45391,46083,48484,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr16	89508402	89557748	chr16:89508402-89557748	0	+	89508417	89536910	0	19	198,103,90,242,140,103,126,163,174,184,125,159,103,111,116,157,167,78,862,	0,2087,4545,15603,17926,21074,22280,23501,24060,28362,36245,37469,38255,39600,42091,44576,45391,46083,48484,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr16	89508402	89557747	chr16:89508402-89557747	0	+	89508417	89545958	789624	18	198,103,90,242,140,103,126,163,174,125,159,103,111,116,157,167,78,861,	0,2087,4545,15603,17926,21074,22280,23501,24060,36245,37469,38255,39600,42091,44576,45391,46083,48484,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr16	89508402	89557690	chr16:89508402-89557690	0	+	89508417	89541011	789624	20	198,103,90,242,140,103,126,163,174,84,1078,125,159,103,111,116,157,167,78,804,	0,2087,4545,15603,17926,21074,22280,23501,24060,32541,32799,36245,37469,38255,39600,42091,44576,45391,46083,48484,
#Partially deleted in new
chr16	89508405	89540977	chr16:89508405-89540977	0	+	89508405	89508405	8553170	4	195,103,90,34,	0,2084,4542,32538,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	89508408	89531602	chr16:89508408-89531602	0	+	89508408	89508408	8553170	6	192,103,90,242,140,2126,	0,2081,4539,15597,17920,21068,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr16	89508408	89557405	chr16:89508408-89557405	0	+	89508417	89545958	789624	18	192,103,90,242,140,103,126,163,174,125,108,103,111,116,157,167,78,519,	0,2081,4539,15597,17920,21068,22274,23495,24054,36239,37463,38249,39594,42085,44570,45385,46077,48478,
#Partially deleted in new
chr16	89508409	89557744	chr16:89508409-89557744	1	+	89508417	89557093	789624	17	191,103,90,242,140,103,126,142,174,125,103,111,116,157,167,78,858,	0,2080,4538,15596,17919,21067,22273,23515,24053,36238,38248,39593,42084,44569,45384,46076,48477,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	89508409	89546075	chr16:89508409-89546075	0	+	89508417	89529139	789624	8	191,103,90,390,126,163,174,1428,	0,2080,4538,20725,22273,23494,24053,36238,
#Partially deleted in new
chr16	89508409	89557747	chr16:89508409-89557747	0	+	89508417	89530693	789624	14	191,103,90,126,163,174,125,103,111,116,157,167,78,861,	0,2080,4538,22273,23494,24053,36238,38248,39593,42084,44569,45384,46076,48477,
#Partially deleted in new
chr16	89508409	89557701	chr16:89508409-89557701	1	+	89508417	89556927	789624	12	191,103,90,125,103,111,116,157,167,78,208,815,	0,2080,4538,36238,38248,39593,42084,44569,45384,46076,47468,48477,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr16	89508409	89557737	chr16:89508409-89557737	0	+	89508417	89545958	789624	19	191,103,90,242,140,103,126,163,174,125,159,50,103,111,116,157,167,78,851,	0,2080,4538,15596,17919,21067,22273,23494,24053,36238,37462,37722,38248,39593,42084,44569,45384,46076,48477,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	89508410	89537721	chr16:89508410-89537721	1	+	89508417	89536910	0	10	190,103,90,242,140,103,126,163,174,957,	0,2079,4537,15595,17918,21066,22272,23493,24052,28354,
#Partially deleted in new
chr16	89508410	89531985	chr16:89508410-89531985	0	+	89508417	89530841	789624	8	190,103,90,242,140,103,275,82,	0,2079,4537,15595,17918,21066,22272,23493,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	89508467	89548336	chr16:89508467-89548336	0	+	89508467	89508467	8553170	11	133,103,90,242,140,103,1384,174,125,103,334,	0,2022,4480,15538,17861,21009,22215,23995,36180,38190,39535,
#Partially deleted in new
chr16	89508485	89532522	chr16:89508485-89532522	0	+	89508485	89529209	789624	8	115,103,90,242,390,126,163,60,	0,2004,4462,15520,20649,22197,23418,23977,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr16	89508497	89557747	chr16:89508497-89557747	0	+	89508497	89545958	789624	17	103,103,90,242,140,103,126,163,174,125,889,111,116,157,167,78,861,	0,1992,4450,15508,17831,20979,22185,23406,23965,36150,37374,39505,41996,44481,45296,45988,48389,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr16	89508502	89554544	chr16:89508502-89554544	0	+	89508502	89528710	789624	16	98,103,90,242,140,948,126,163,174,125,103,111,116,157,167,59,	0,1987,4445,15503,17826,20129,22180,23401,23960,36145,38155,39500,41991,44476,45291,45983,
#Partially deleted in new
chr16	89508534	89529493	chr16:89508534-89529493	0	+	89508534	89520042	789624	7	66,103,90,278,242,140,17,	0,1955,4413,11443,15471,17794,20942,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr16	89508544	89557387	chr16:89508544-89557387	0	+	89508544	89541011	789624	20	56,103,90,242,140,103,126,163,174,1336,125,159,50,103,111,116,157,167,78,501,	0,1945,4403,15461,17784,20932,22138,23359,23918,32399,36103,37327,37587,38113,39458,41949,44434,45249,45941,48342,
#Partially deleted in new
chr16	89508551	89557737	chr16:89508551-89557737	0	+	89508551	89512980	789624	15	49,90,242,140,103,126,163,174,103,111,116,157,167,78,851,	0,4396,15454,17777,20925,22131,23352,23911,38106,39451,41942,44427,45242,45934,48335,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	89508553	89527380	chr16:89508553-89527380	0	+	89508553	89508553	8553170	5	47,103,90,242,1052,	0,1936,4394,15452,17775,
#Partially deleted in new
chr16	89508712	89524077	chr16:89508712-89524077	0	+	89508712	89508712	8553170	4	279,103,90,72,	0,1777,4235,15293,
#Partially deleted in new
chr16	89510500	89557737	chr16:89510500-89557737	0	+	89510500	89557093	789624	10	92,90,125,103,111,116,157,167,78,851,	0,2447,34147,36157,37502,39993,42478,43293,43985,46386,
#Partially deleted in new
chr16	89510537	89532570	chr16:89510537-89532570	0	+	89510537	89529153	789624	8	55,90,242,140,390,126,163,108,	0,2410,13468,15791,18597,20145,21366,21925,
#Partially deleted in new
chr16	89510568	89557744	chr16:89510568-89557744	0	+	89510568	89541207	789624	18	24,90,242,140,103,126,163,174,34,1127,125,103,111,116,157,167,78,858,	0,2379,13437,15760,18908,20114,21335,21894,30375,30584,34079,36089,37434,39925,42410,43225,43917,46318,
#Partially deleted in new
chr16	89512978	89557685	chr16:89512978-89557685	0	+	89512978	89541011	789624	18	59,242,140,103,126,163,174,84,1127,125,103,111,116,157,167,78,287,414,	0,11027,13350,16498,17704,18925,19484,27965,28174,31669,33679,35024,37515,40000,40815,41507,43908,44293,
#Partially deleted in new
chr16	89512998	89557737	chr16:89512998-89557737	0	+	89512998	89557093	789624	15	39,242,140,103,120,163,174,125,103,111,116,157,167,78,851,	0,11007,13330,16478,17690,18905,19464,31649,33659,35004,37495,39980,40795,41487,43888,
#Partially deleted in new
chr16	89513013	89532040	chr16:89513013-89532040	0	+	89513013	89513013	8553170	5	24,242,140,126,137,	0,10992,13315,17669,18890,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	89516796	89522219	chr16:89516796-89522219	0	+	89516796	89516796	8553170	1	5423,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	89522198	89548261	chr16:89522198-89548261	0	+	89522198	89522198	8553170	7	2049,140,103,126,163,174,3614,	0,4130,7278,8484,9705,10264,22449,
#Partially deleted in new
chr16	89523812	89557747	chr16:89523812-89557747	0	+	89523812	89523812	8553170	14	435,140,103,126,163,174,125,103,111,116,157,167,78,861,	0,2516,5664,6870,8091,8650,20835,22845,24190,26681,29166,29981,30673,33074,
#Partially deleted in new
chr16	89524014	89557718	chr16:89524014-89557718	0	+	89524014	89556927	789624	14	233,140,103,126,163,174,125,103,111,116,157,167,94,832,	0,2314,5462,6668,7889,8448,20633,22643,23988,26479,28964,29779,30455,32872,
#Partially deleted in new
chr16	89524227	89557750	chr16:89524227-89557750	0	+	89524227	89550604	789624	12	20,140,103,126,163,174,125,116,157,167,78,864,	0,2101,5249,6455,7676,8235,20420,26266,28751,29566,30258,32659,
#Partially deleted in new
chr16	89524229	89548367	chr16:89524229-89548367	0	+	89524229	89524229	8553170	9	18,140,103,126,163,174,125,103,365,	0,2099,5247,6453,7674,8233,20418,22428,23773,
#Partially deleted in new
chr16	89526373	89546760	chr16:89526373-89546760	0	+	89526373	89532627	789624	6	95,103,126,174,125,103,	0,3103,4309,6089,18274,20284,
#Partially deleted in new
chr16	89529491	89557737	chr16:89529491-89557737	0	+	89529491	89541011	789624	14	88,126,163,174,84,194,125,103,111,116,157,167,78,851,	0,1191,2412,2971,11452,11661,15156,17166,18511,21002,23487,24302,24994,27395,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	89530247	89548249	chr16:89530247-89548249	0	+	89530247	89530247	8553170	3	710,103,247,	0,16410,17755,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	89530676	89546181	chr16:89530676-89546181	0	+	89530676	89530676	8553170	6	132,163,174,125,159,50,	0,1227,1786,13971,15195,15455,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	89530942	89557747	chr16:89530942-89557747	0	+	89530942	89530942	8553170	10	1124,174,125,889,111,116,157,167,78,861,	0,1520,13705,14929,17060,19551,22036,22851,23543,25944,
#Partially deleted in new
chr16	89531903	89554662	chr16:89531903-89554662	0	+	89531903	89553890	789624	9	163,174,125,103,111,116,185,167,177,	0,559,12744,14754,16099,18590,21075,21890,22582,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	89531985	89546175	chr16:89531985-89546175	0	+	89531985	89541011	789624	6	81,174,403,125,159,44,	0,477,8958,12662,13886,14146,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	89532019	89533791	chr16:89532019-89533791	0	+	89532019	89532758	789624	2	47,1329,	0,443,
#Partially deleted in new
chr16	89532534	89544745	chr16:89532534-89544745	0	+	89532534	89541011	789624	4	102,84,232,98,	0,8409,8618,12113,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	89532561	89547635	chr16:89532561-89547635	0	+	89532561	89532561	8553170	3	75,125,978,	0,12086,14096,
#Partially deleted in new
chr16	89532580	89548364	chr16:89532580-89548364	0	+	89532580	89532580	8553170	4	56,84,120,63,	0,8363,8572,15721,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	89536950	89557602	chr16:89536950-89557602	0	+	89536950	89536950	8553170	11	960,125,159,50,103,111,116,157,167,78,716,	0,7697,8921,9181,9707,11052,13543,16028,16843,17535,19936,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	89537147	89548291	chr16:89537147-89548291	0	+	89537147	89537147	8553170	4	4237,125,103,289,	0,7500,9510,10855,
#Partially deleted in new
chr16	89540631	89557535	chr16:89540631-89557535	0	+	89540631	89540631	8553170	9	739,125,103,111,116,157,167,78,649,	0,4016,6026,7371,9862,12347,13162,13854,16255,
#Partially deleted in new
chr16	89541102	89548018	chr16:89541102-89548018	0	+	89541102	89541102	8553170	4	282,125,103,16,	0,3545,5555,6900,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	89541212	89557766	chr16:89541212-89557766	0	+	89541212	89541212	8553170	12	172,125,159,50,103,111,357,116,157,167,78,880,	0,3435,4659,4919,5445,6790,7767,9281,11766,12581,13273,15674,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	89542982	89557748	chr16:89542982-89557748	0	+	89542982	89542982	8553170	8	1790,103,111,116,157,167,78,862,	0,3675,5020,7511,9996,10811,11503,13904,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	89542983	89548293	chr16:89542983-89548293	0	+	89542983	89542983	8553170	3	1789,889,291,	0,2888,5019,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	89542983	89557747	chr16:89542983-89557747	0	+	89542983	89542983	8553170	9	1789,310,103,111,116,157,167,78,861,	0,2888,3674,5019,7510,9995,10810,11502,13903,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	89543575	89557739	chr16:89543575-89557739	0	+	89543575	89543575	8553170	10	1197,159,50,103,111,116,157,167,78,853,	0,2296,2556,3082,4427,6918,9403,10218,10910,13311,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	89543684	89557755	chr16:89543684-89557755	0	+	89543684	89543684	8553170	8	1088,889,111,116,157,167,78,869,	0,2187,4318,6809,9294,10109,10801,13202,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	89543689	89557752	chr16:89543689-89557752	0	+	89543689	89543689	8553170	11	1083,159,56,103,111,214,116,157,167,78,866,	0,2182,2442,2968,4313,5810,6804,9289,10104,10796,13197,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	89543689	89557743	chr16:89543689-89557743	0	+	89543689	89543689	8553170	9	1083,124,103,111,116,157,167,78,857,	0,2182,2968,4313,6804,9289,10104,10796,13197,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	89543727	89557747	chr16:89543727-89557747	0	+	89543727	89543727	8553170	8	1045,103,111,116,284,167,78,861,	0,2930,4275,6766,9124,10066,10758,13159,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	89543738	89557749	chr16:89543738-89557749	0	+	89543738	89543738	8553170	9	1034,159,103,111,116,157,167,78,863,	0,2133,2919,4264,6755,9240,10055,10747,13148,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	89543768	89557343	chr16:89543768-89557343	0	+	89543768	89543768	8553170	10	1004,310,103,111,116,157,167,78,165,457,	0,2103,2889,4234,6725,9210,10025,10717,12152,13118,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	89543859	89549432	chr16:89543859-89549432	0	+	89543859	89543859	8553170	5	913,310,103,111,812,	0,2012,2798,4143,4761,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	89543978	89548322	chr16:89543978-89548322	0	+	89543978	89543978	8553170	3	2203,103,320,	0,2679,4024,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	89544647	89557745	chr16:89544647-89557745	0	+	89544647	89545958	789624	10	125,310,103,111,1287,116,157,167,78,859,	0,1224,2010,3355,3779,5846,8331,9146,9838,12239,
#Partially deleted in new
chr16	89544725	89553079	chr16:89544725-89553079	0	+	89544725	89549139	789624	6	47,103,111,256,116,101,	0,1932,3277,4355,5768,8253,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	89546149	89548367	chr16:89546149-89548367	0	+	89546149	89546149	8553170	2	611,365,	0,1853,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	89546555	89557747	chr16:89546555-89557747	0	+	89546555	89546555	8553170	8	205,111,116,157,167,1600,287,476,	0,1447,3938,6423,7238,7930,10331,10716,
#Partially deleted in new
chr16	89546663	89557130	chr16:89546663-89557130	0	+	89546663	89553890	789624	7	97,111,116,157,222,78,244,	0,1339,3830,6315,7075,7822,10223,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	89548158	89557762	chr16:89548158-89557762	0	+	89548158	89548158	8553170	5	2451,157,167,78,876,	0,4820,5635,6327,8728,
#Partially deleted in new
chr16	89548888	89553100	chr16:89548888-89553100	0	+	89548888	89548888	8553170	3	448,116,122,	0,1605,4090,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	89549943	89557747	chr16:89549943-89557747	0	+	89549943	89549943	8553170	4	666,157,167,3262,	0,3035,3850,4542,
#Partially deleted in new
chr16	89550535	89553367	chr16:89550535-89553367	0	+	89550535	89550535	8553170	2	74,389,	0,2443,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	89551173	89557749	chr16:89551173-89557749	0	+	89551173	89551173	8553170	3	2787,78,863,	0,3312,5713,
#Partially deleted in new
chr16	89552516	89557425	chr16:89552516-89557425	0	+	89552516	89552516	8553170	4	619,167,78,539,	0,1277,1969,4370,
#Partially deleted in new
chr16	89554485	89557488	chr16:89554485-89557488	0	+	89554485	89556927	789624	3	78,127,602,	0,1473,2401,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	89560656	89566828	chr16:89560656-89566828	3	+	89560959	89563042	0	6	56,124,142,174,57,3945,	0,283,570,921,1678,2227,
#Deleted in new
chr16	89560676	89562393	chr16:89560676-89562393	0	+	89560676	89560676	8553170	4	36,429,174,59,	0,263,901,1658,
#Deleted in new
chr16	89560676	89563043	chr16:89560676-89563043	0	+	89560676	89560676	8553170	1	2367,	0,
#Deleted in new
chr16	89560678	89563067	chr16:89560678-89563067	0	+	89560678	89560678	8553170	5	34,124,525,57,184,	0,261,548,1656,2205,
#Deleted in new
chr16	89560680	89563032	chr16:89560680-89563032	0	+	89562376	89563032	789624	5	32,142,174,57,149,	0,546,897,1654,2203,
#Deleted in new
chr16	89560680	89563080	chr16:89560680-89563080	1	+	89560959	89563042	0	6	32,110,142,174,57,197,	0,273,546,897,1654,2203,
#Deleted in new
chr16	89560681	89561523	chr16:89560681-89561523	0	+	89560681	89560681	8553170	2	31,584,	0,258,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	89560681	89563473	chr16:89560681-89563473	0	+	89560959	89561683	789624	5	31,124,156,57,590,	0,258,914,1653,2202,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	89560682	89563952	chr16:89560682-89563952	1	+	89560959	89563042	0	7	30,124,142,21,12,57,1069,	0,257,544,895,1057,1652,2201,
#Deleted in new
chr16	89560682	89561849	chr16:89560682-89561849	0	+	89560682	89560682	8553170	4	30,124,142,272,	0,257,544,895,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	89560710	89564542	chr16:89560710-89564542	1	+	89560959	89563042	0	5	353,142,174,57,1659,	0,516,867,1624,2173,
#Deleted in new
chr16	89560710	89561710	chr16:89560710-89561710	0	+	89560959	89561710	789624	4	129,124,142,133,	0,229,516,867,
#Deleted in new
chr16	89560903	89563066	chr16:89560903-89563066	0	+	89560903	89560903	8553170	4	465,174,57,183,	0,674,1431,1980,
#Deleted in new
chr16	89561433	89561517	chr16:89561433-89561517	3	+	89561433	89561433	789624	1	84,	0,
#Deleted in new
chr16	89562139	89563066	chr16:89562139-89563066	0	+	89562139	89562139	8553170	2	252,183,	0,744,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	89562369	89563438	chr16:89562369-89563438	0	+	89562369	89563042	789624	2	76,555,	0,514,
#Partially deleted in new
chr16	89575767	89597246	chr16:89575767-89597246	3	+	89575897	89596621	789624	17	304,183,140,85,75,75,84,90,99,87,60,134,55,52,134,237,763,	0,1771,3089,7676,7929,8260,9006,9696,9919,10902,11275,12907,14129,15239,15359,19599,20716,
#Partially deleted in new
chr16	89575781	89583714	chr16:89575781-89583714	0	+	89575897	89583449	789624	4	290,183,85,18,	0,1757,7662,7915,
#Partially deleted in new
chr16	89575790	89597246	chr16:89575790-89597246	1	+	89575897	89596621	789624	15	281,183,75,75,84,90,99,87,60,134,55,52,134,237,763,	0,1748,7906,8237,8983,9673,9896,10879,11252,12884,14106,15216,15336,19576,20693,
#Deleted in new
chr16	89584820	89587732	chr16:89584820-89587732	0	+	89584820	89584820	8553170	6	37,90,99,87,60,177,	0,643,866,1849,2222,2735,
#Partially deleted in new
chr16	89587042	89595423	chr16:89587042-89595423	0	+	89587042	89595423	789624	7	60,27,134,55,52,134,57,	0,513,1632,2854,3964,4084,8324,
#Partially deleted in new
chr16	89588803	89596816	chr16:89588803-89596816	0	+	89588803	89595551	789624	5	5,55,52,237,333,	0,1093,2203,6563,7680,
#Partially deleted in new
chr16	89594099	89596859	chr16:89594099-89596859	0	+	89594099	89594099	8553170	3	59,237,376,	0,1267,2384,
#Deleted in new
chr16	89595575	89596849	chr16:89595575-89596849	0	+	89595575	89596638	789624	3	28,94,366,	0,255,908,
#Deleted in new
chr16	89595769	89596845	chr16:89595769-89596845	0	+	89595769	89595769	8553170	2	155,362,	0,714,
#Partially deleted in new
chr16	89613307	89638430	chr16:89613307-89638430	3	+	89630410	89638222	0	11	97,210,133,133,151,70,177,85,76,136,379,	0,16997,22600,22956,23225,23558,23896,24160,24324,24528,24744,
#Partially deleted in new
chr16	89613307	89636348	chr16:89613307-89636348	0	+	89630410	89636348	789624	4	97,210,133,85,	0,16997,22600,22956,
#Partially deleted in new
chr16	89613548	89637529	chr16:89613548-89637529	0	+	89613548	89613548	8553170	6	171,133,133,151,515,62,	0,22359,22715,22984,23317,23919,
#Partially deleted in new
chr16	89613672	89638398	chr16:89613672-89638398	0	+	89613672	89613672	8553170	9	47,210,133,133,151,70,177,504,347,	0,16632,22235,22591,22860,23193,23531,23795,24379,
#Partially deleted in new
chr16	89616872	89636360	chr16:89616872-89636360	0	+	89630410	89636360	789624	4	42,210,133,97,	0,13432,19035,19391,
#Partially deleted in new
chr16	89620591	89638429	chr16:89620591-89638429	1	+	89630410	89638222	0	11	185,210,133,133,151,70,177,85,76,136,378,	0,9713,15316,15672,15941,16274,16612,16876,17040,17244,17460,
#Partially deleted in new
chr16	89630288	89638456	chr16:89630288-89638456	1	+	89630410	89638222	0	10	226,133,133,151,70,177,85,76,136,405,	0,5619,5975,6244,6577,6915,7179,7343,7547,7763,
#Deleted in new
chr16	89637575	89638295	chr16:89637575-89638295	0	+	89637575	89637575	8553170	3	132,136,244,	0,260,476,
#Partially deleted in new
chr16	89644430	89657845	chr16:89644430-89657845	3	-	89646065	89657588	0	7	1657,188,129,147,78,20,264,	0,2096,2772,4920,7138,9473,13151,
#Deleted in new
chr16	89644434	89646880	chr16:89644434-89646880	0	-	89644434	89644434	8553170	2	1653,354,	0,2092,
#Partially deleted in new
chr16	89644462	89657709	chr16:89644462-89657709	1	-	89646065	89649410	789624	6	1625,188,129,147,78,128,	0,2064,2740,4888,7106,13119,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	89645835	89649593	chr16:89645835-89649593	0	-	89645835	89645835	8553170	4	252,188,129,243,	0,691,1367,3515,
#Partially deleted in new
chr16	89645888	89657650	chr16:89645888-89657650	1	-	89646065	89657588	789624	7	199,188,129,120,78,20,69,	0,638,1314,3489,5680,8015,11693,
#Partially deleted in new
chr16	89645954	89657721	chr16:89645954-89657721	0	-	89647037	89657588	789624	7	133,188,297,147,78,20,140,	0,572,1080,3396,5614,7949,11627,
#Partially deleted in new
chr16	89646911	89657605	chr16:89646911-89657605	0	-	89646911	89646911	8553170	5	420,147,78,20,24,	0,2439,4657,6992,10670,
#Partially deleted in new
chr16	89646954	89649539	chr16:89646954-89649539	0	-	89646954	89646954	8553170	2	377,189,	0,2396,
#Partially deleted in new
chr16	89647043	89657721	chr16:89647043-89657721	0	-	89647043	89647043	8553170	4	288,147,78,140,	0,2307,4525,10538,
#Partially deleted in new
chr16	89649178	89657697	chr16:89649178-89657697	0	-	89649178	89649178	8553170	4	319,78,20,116,	0,2390,4725,8403,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	89657801	89671267	chr16:89657801-89671267	3	+	89657801	89669497	789624	3	34,174,1982,	0,446,11484,
#Partially deleted in new
chr16	89657803	89670456	chr16:89657803-89670456	1	+	89657911	89669497	789624	3	145,174,1171,	0,444,11482,
#Partially deleted in new
chr16	89657811	89669631	chr16:89657811-89669631	0	+	89657811	89669497	789624	3	55,174,346,	0,436,11474,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	89657828	89671272	chr16:89657828-89671272	0	+	89657828	89658035	789624	2	381,1987,	0,11457,
#Partially deleted in new
chr16	89657837	89670297	chr16:89657837-89670297	0	+	89657837	89658251	789624	3	111,174,1012,	0,410,11448,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	89657860	89668044	chr16:89657860-89668044	0	+	89657860	89658304	789624	3	88,330,52,	0,387,10132,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	89657870	89661508	chr16:89657870-89661508	0	+	89657870	89658251	789624	2	78,3261,	0,377,
#Partially deleted in new
chr16	89658046	89670456	chr16:89658046-89670456	1	+	89658303	89669497	789624	2	375,1171,	0,11239,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	89658101	89661483	chr16:89658101-89661483	1	+	89658303	89660550	789624	2	320,944,	0,2438,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	89671567	89685304	chr16:89671567-89685304	3	+	89671567	89671567	8553170	3	1300,183,1594,	0,10746,12143,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr16	89680736	89696353	chr16:89680736-89696353	1	+	89682477	89695692	789624	12	1760,72,103,82,68,53,70,60,124,140,53,759,	0,9816,10706,11069,11712,12537,12661,13436,13928,14194,14556,14858,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	89682619	89686569	chr16:89682619-89686569	3	-	89682619	89682619	8553170	3	223,375,123,	0,2681,3827,
#Partially deleted in new
chr16	89686667	89696364	chr16:89686667-89696364	3	+	89686710	89695692	789624	13	130,73,72,103,82,68,53,70,60,124,140,53,770,	0,2584,3885,4775,5138,5781,6606,6730,7505,7997,8263,8625,8927,
#Partially deleted in new
chr16	89686669	89696164	chr16:89686669-89696164	1	+	89690605	89695775	789624	13	90,73,72,103,82,68,53,70,60,124,140,53,436,	0,2582,3883,4773,5136,5779,6604,6728,7503,7995,8261,8623,9059,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	89686669	89691535	chr16:89686669-89691535	0	+	89686710	89687668	789624	5	90,227,73,72,93,	0,919,2582,3883,4773,
#Partially deleted in new
chr16	89686679	89693402	chr16:89686679-89693402	0	+	89686710	89689273	789624	8	80,100,73,72,103,82,68,129,	0,769,2572,3873,4763,5126,5769,6594,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	89686683	89691507	chr16:89686683-89691507	0	+	89686710	89687711	789624	5	114,227,73,72,65,	0,905,2568,3869,4759,
#Partially deleted in new
chr16	89686689	89696354	chr16:89686689-89696354	0	+	89686689	89686689	8553170	12	108,73,72,103,82,68,194,60,124,140,53,626,	0,2562,3863,4753,5116,5759,6584,7483,7975,8241,8603,9039,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	89686689	89692514	chr16:89686689-89692514	0	+	89686710	89687711	789624	6	108,227,72,103,82,66,	0,899,3863,4753,5116,5759,
#Partially deleted in new
chr16	89686690	89696038	chr16:89686690-89696038	0	+	89686710	89690594	789624	12	107,72,103,82,68,53,70,60,124,140,53,444,	0,3862,4752,5115,5758,6583,6707,7482,7974,8240,8602,8904,
#Partially deleted in new
chr16	89686691	89694040	chr16:89686691-89694040	0	+	89686691	89686691	8553170	7	68,55,72,103,82,68,767,	0,2560,3861,4751,5114,5757,6582,
#Partially deleted in new
chr16	89686699	89696354	chr16:89686699-89696354	0	+	89686699	89686699	8553170	11	98,73,72,103,82,68,959,124,140,53,760,	0,2552,3853,4743,5106,5749,6574,7965,8231,8593,8895,
#Partially deleted in new
chr16	89686699	89690594	chr16:89686699-89690594	1	+	89686710	89690594	789624	2	98,42,	0,3853,
#Partially deleted in new
chr16	89686705	89694972	chr16:89686705-89694972	0	+	89690605	89694972	789624	11	54,73,72,103,82,68,53,70,60,220,42,	0,2546,3847,4737,5100,5743,6568,6692,7467,7863,8225,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	89686712	89692682	chr16:89686712-89692682	0	+	89686712	89686712	8553170	5	85,72,103,82,234,	0,3840,4730,5093,5736,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	89686727	89691512	chr16:89686727-89691512	0	+	89686727	89686727	8553170	5	32,227,73,72,70,	0,861,2524,3825,4715,
#Partially deleted in new
chr16	89686950	89690557	chr16:89686950-89690557	0	+	89686950	89686950	8553170	3	384,73,5,	0,2301,3602,
#Partially deleted in new
chr16	89686971	89693495	chr16:89686971-89693495	0	+	89686971	89686971	8553170	6	363,72,103,82,68,222,	0,3581,4471,4834,5477,6302,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	89689502	89691845	chr16:89689502-89691845	0	+	89689502	89689502	8553170	3	1122,103,40,	0,1940,2303,
#Partially deleted in new
chr16	89690605	89695775	chr16:89690605-89695775	1	+	89690605	89695775	789624	11	19,103,82,68,53,70,60,124,140,53,47,	0,837,1200,1843,2668,2792,3567,4059,4325,4687,5123,
#Partially deleted in new
chr16	89691825	89694454	chr16:89691825-89694454	0	+	89691825	89691825	8553170	5	62,68,53,70,282,	0,623,1448,1572,2347,
#Partially deleted in new
chr16	89692236	89693718	chr16:89692236-89693718	0	+	89692236	89692236	8553170	2	280,445,	0,1037,
#Deleted in new
chr16	89694183	89696094	chr16:89694183-89696094	0	+	89694183	89694994	789624	4	49,122,53,500,	0,747,1109,1411,
#Partially deleted in new
chr16	89696342	89701695	chr16:89696342-89701695	3	-	89697333	89701232	789624	3	1963,304,68,	0,4587,5285,
#Partially deleted in new
chr16	89696356	89701705	chr16:89696356-89701705	1	-	89696819	89701232	789624	4	508,111,304,78,	0,1838,4573,5271,
#Partially deleted in new
chr16	89698067	89701640	chr16:89698067-89701640	0	-	89698067	89701232	789624	3	238,304,150,	0,2862,3423,
#Partially deleted in new
chr16	89707133	89720986	chr16:89707133-89720986	3	-	89707860	89720861	789624	15	821,105,100,209,130,425,86,88,53,63,112,163,93,76,224,	0,1293,1723,2093,2643,3452,4193,4748,4913,5326,5471,9328,9596,11893,13629,
#Partially deleted in new
chr16	89707133	89719369	chr16:89707133-89719369	1	-	89707860	89716787	789624	14	821,105,100,209,130,425,86,88,53,63,112,163,93,343,	0,1293,1723,2093,2643,3452,4193,4748,4913,5326,5471,9328,9596,11893,
#Partially deleted in new
chr16	89707783	89710642	chr16:89707783-89710642	0	-	89707860	89710642	789624	6	171,105,100,209,133,57,	0,643,1073,1443,1993,2802,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	89710932	89713080	chr16:89710932-89713080	0	-	89710932	89710932	8553170	6	78,86,88,47,63,476,	0,394,949,1114,1527,1672,
#Partially deleted in new
chr16	89710964	89711644	chr16:89710964-89711644	0	-	89710964	89710964	8553170	3	46,86,46,	0,362,634,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	89711358	89713040	chr16:89711358-89713040	0	-	89711358	89711358	8553170	5	54,88,53,63,436,	0,523,688,1101,1246,
#Partially deleted in new
chr16	89711392	89720885	chr16:89711392-89720885	0	-	89712656	89720861	789624	6	20,88,53,63,112,123,	0,489,654,1067,1212,9370,
#Partially deleted in new
chr16	89711855	89718165	chr16:89711855-89718165	3	+	89711855	89711855	789624	4	367,130,434,822,	0,833,4615,5488,
#Partially deleted in new
chr16	89716527	89718164	chr16:89716527-89718164	0	+	89716527	89716527	8553170	2	110,821,	0,816,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	89720399	89738281	chr16:89720399-89738281	0	+	89722550	89729249	789624	11	183,304,47,450,47,84,111,76,118,100,306,	0,2131,2737,2860,6879,8835,12902,13082,13521,17406,17576,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr16	89720984	89740903	chr16:89720984-89740903	3	+	89722550	89738246	789624	11	292,304,47,450,79,84,111,76,118,100,2928,	0,1546,2152,2275,6294,8250,12317,12497,12936,16821,16991,
#Partially deleted in new
chr16	89721006	89738520	chr16:89721006-89738520	1	+	89722550	89737909	789624	10	270,304,47,431,47,84,111,76,118,715,	0,1524,2130,2272,6272,8228,12295,12475,12914,16799,
#Partially deleted in new
chr16	89721159	89739816	chr16:89721159-89739816	0	+	89721159	89721159	8553170	10	117,304,573,79,84,111,76,118,100,1841,	0,1371,1977,6119,8075,12142,12322,12761,16646,16816,
#Partially deleted in new
chr16	89721543	89738571	chr16:89721543-89738571	1	+	89721640	89738246	789624	11	302,304,47,450,79,84,111,76,118,100,596,	0,987,1593,1716,5735,7691,11758,11938,12377,16262,16432,
#Partially deleted in new
chr16	89721572	89738571	chr16:89721572-89738571	0	+	89721640	89729249	789624	11	273,304,47,450,47,84,111,76,118,100,596,	0,958,1564,1687,5706,7662,11729,11909,12348,16233,16403,
#Partially deleted in new
chr16	89722868	89738589	chr16:89722868-89738589	0	+	89722868	89722868	8553170	9	315,450,79,84,111,76,118,100,614,	0,391,4410,6366,10433,10613,11052,14937,15107,
#Partially deleted in new
chr16	89723488	89733537	chr16:89723488-89733537	0	+	89723488	89729249	789624	4	221,47,84,236,	0,3790,5746,9813,
#Partially deleted in new
chr16	89723605	89733470	chr16:89723605-89733470	0	+	89723605	89723605	8553170	4	104,79,84,169,	0,3673,5629,9696,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	89731525	89738570	chr16:89731525-89738570	0	+	89731525	89731525	8553170	4	2032,118,100,595,	0,2395,6280,6450,
#Partially deleted in new
chr16	89733248	89737883	chr16:89733248-89737883	0	+	89733248	89733248	8553170	4	164,76,118,78,	0,233,672,4557,
#Partially deleted in new
chr16	89737548	89816646	chr16:89737548-89816646	3	-	89738600	89816615	789624	43	1160,93,157,76,106,63,139,113,105,60,109,173,85,129,74,177,97,188,94,71,137,114,74,50,61,89,60,96,111,134,142,77,113,67,34,83,113,74,96,143,94,110,110,	0,1333,1584,1929,2445,3255,5251,7410,9035,9282,11110,12181,14589,21028,24400,27341,29592,32288,32617,33015,34129,35722,38193,41252,41394,42320,45310,45458,47305,53854,54378,54922,58357,61617,62056,65710,67731,70745,73158,73380,76971,78328,78988,
#Deleted in new
chr16	89737711	89738329	chr16:89737711-89738329	0	+	89737711	89737711	8553170	2	194,354,	0,264,
#Partially deleted in new
chr16	89738402	89816646	chr16:89738402-89816646	1	-	89738697	89816615	789624	43	306,93,161,76,106,63,139,113,105,60,109,173,85,129,74,177,97,188,94,71,137,114,74,50,61,89,60,96,111,134,142,77,113,67,34,83,113,74,96,143,94,110,110,	0,479,726,1075,1591,2401,4397,6556,8181,8428,10256,11327,13735,20174,23546,26487,28738,31434,31763,32161,33275,34868,37339,40398,40540,41466,44456,44604,46451,53000,53524,54068,57503,60763,61202,64856,66877,69891,72304,72526,76117,77474,78134,
#Deleted in new
chr16	89738492	89740078	chr16:89738492-89740078	0	-	89738600	89740078	789624	5	216,45,274,76,85,	0,389,523,985,1501,
#Deleted in new
chr16	89738494	89739758	chr16:89738494-89739758	0	-	89738494	89738494	8553170	4	214,93,157,281,	0,387,638,983,
#Partially deleted in new
chr16	89738629	89745062	chr16:89738629-89745062	0	-	89738697	89745062	789624	7	79,93,129,106,63,139,104,	0,252,508,1364,2174,4170,6329,
#Partially deleted in new
chr16	89738743	89742894	chr16:89738743-89742894	0	-	89738753	89742894	789624	6	231,161,76,106,63,95,	0,385,734,1250,2060,4056,
#Partially deleted in new
chr16	89738882	89742828	chr16:89738882-89742828	0	-	89738882	89742828	789624	5	92,157,76,106,29,	0,250,595,1111,3917,
#Partially deleted in new
chr16	89739281	89749816	chr16:89739281-89749816	0	-	89740835	89749816	789624	9	8,76,106,63,113,105,60,109,87,	0,196,712,1522,5677,7302,7549,9377,10448,
#Partially deleted in new
chr16	89739362	89745008	chr16:89739362-89745008	0	-	89739362	89739362	8553170	3	737,63,50,	0,1441,5596,
#Partially deleted in new
chr16	89739740	89765039	chr16:89739740-89765039	0	-	89739740	89739740	8553170	11	359,63,139,113,105,60,109,173,85,74,150,	0,1063,3059,5218,6843,7090,8918,9989,12397,22208,25149,
#Partially deleted in new
chr16	89742901	89765004	chr16:89742901-89765004	0	-	89749892	89765004	789624	9	37,113,105,60,109,173,129,74,115,	0,2057,3682,3929,5757,6828,15675,19047,21988,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	89744686	89749796	chr16:89744686-89749796	0	-	89744686	89744686	8553170	5	385,105,60,109,67,	0,1897,2144,3972,5043,
#Partially deleted in new
chr16	89745026	89765044	chr16:89745026-89765044	0	-	89748662	89765044	789624	8	45,105,60,109,85,129,74,155,	0,1557,1804,3632,7111,13550,16922,19863,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	89748763	89764947	chr16:89748763-89764947	0	-	89762780	89764947	789624	6	4,173,85,74,156,141,	0,966,3374,13185,13874,16043,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	89752160	89767147	chr16:89752160-89767147	0	-	89762745	89767147	789624	6	62,129,74,156,177,7,	0,6416,9788,10477,12729,14980,
#Partially deleted in new
chr16	89767141	89770024	chr16:89767141-89770024	0	-	89769832	89770024	789624	2	96,317,	0,2566,
#Partially deleted in new
chr16	89769914	89770583	chr16:89769914-89770583	0	-	89769914	89769914	8553170	2	110,418,	0,251,
#Partially deleted in new
chr16	89770429	89778850	chr16:89770429-89778850	0	-	89770429	89770429	8553170	6	33,71,137,114,74,50,	0,134,1248,2841,5312,8371,
#Deleted in new
chr16	89791043	89792011	chr16:89791043-89792011	0	-	89791043	89791043	8553170	2	493,85,	0,883,
#Partially deleted in new
chr16	89791507	89808366	chr16:89791507-89808366	0	-	89792540	89808366	789624	8	29,142,77,67,34,83,113,73,	0,419,963,7658,8097,11751,13772,16786,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	89791562	89792725	chr16:89791562-89792725	0	-	89791562	89791562	8553170	2	506,255,	0,908,
#Partially deleted in new
chr16	89795905	89799232	chr16:89795905-89799232	0	-	89799107	89799232	789624	2	113,282,	0,3045,
#Partially deleted in new
chr16	89798353	89816647	chr16:89798353-89816647	0	-	89798353	89798353	8553170	10	726,67,34,83,113,74,96,143,94,771,	0,812,1251,4905,6926,9940,12353,12575,16166,17523,
#Partially deleted in new
chr16	89798373	89816657	chr16:89798373-89816657	1	-	89799078	89816615	789624	11	706,67,34,83,113,74,96,143,94,110,121,	0,792,1231,4885,6906,9920,12333,12555,16146,17503,18163,
#Partially deleted in new
chr16	89798384	89816635	chr16:89798384-89816635	1	-	89799107	89816615	789624	10	848,34,83,113,74,96,143,94,110,99,	0,1220,4874,6895,9909,12322,12544,16135,17492,18152,
#Partially deleted in new
chr16	89798918	89816655	chr16:89798918-89816655	1	-	89799057	89816615	789624	11	161,61,34,83,113,74,96,143,94,110,119,	0,253,686,4340,6361,9375,11788,12010,15601,16958,17618,
#Partially deleted in new
chr16	89798918	89816657	chr16:89798918-89816657	1	-	89799078	89816615	789624	10	161,67,34,83,113,74,143,94,110,121,	0,247,686,4340,6361,9375,12010,15601,16958,17618,
#Partially deleted in new
chr16	89798990	89815978	chr16:89798990-89815978	0	-	89799627	89815978	789624	9	89,67,34,113,74,96,143,94,102,	0,175,614,6289,9303,11716,11938,15529,16886,
#Partially deleted in new
chr16	89808310	89816621	chr16:89808310-89816621	0	-	89810995	89816615	789624	6	57,96,129,94,110,85,	0,2396,2618,6209,7566,8226,
#Partially deleted in new
chr16	89810571	89816608	chr16:89810571-89816608	0	-	89810571	89810571	8553170	5	231,143,94,110,72,	0,357,3948,5305,5965,
#Partially deleted in new
chr16	89810984	89816648	chr16:89810984-89816648	0	-	89816138	89816615	789624	4	87,94,110,569,	0,3535,4892,5095,
#Partially deleted in new
chr16	89818178	89850562	chr16:89818178-89850562	0	+	89818178	89818178	8553170	3	360,44,259,	0,27143,32125,
#Partially deleted in new
chr16	89818249	89822530	chr16:89818249-89822530	0	+	89818249	89818249	8553170	2	289,298,	0,3983,
#Partially deleted in new
chr16	89828498	89870391	chr16:89828498-89870391	1	+	89828550	89870272	0	13	296,44,357,81,165,87,124,170,190,113,135,68,342,	0,16823,21805,25787,25988,27101,27614,29839,30666,32184,34977,35295,41551,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr16	89828507	89871319	chr16:89828507-89871319	3	+	89828550	89870272	0	15	287,44,357,81,165,87,124,170,190,113,135,68,28,116,1270,	0,16814,21796,25778,25979,27092,27605,29830,30657,32175,34968,35286,39681,41059,41542,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	89828546	89847156	chr16:89828546-89847156	1	+	89828550	89845637	789624	3	248,44,1531,	0,16775,17079,
#Partially deleted in new
chr16	89828697	89859189	chr16:89828697-89859189	0	+	89828697	89836240	789624	10	97,219,44,357,81,165,87,124,170,25,	0,7517,16624,21606,25588,25789,26902,27415,29640,30467,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	89849865	89870386	chr16:89849865-89870386	0	+	89849865	89849865	8553170	13	795,81,165,87,124,170,190,113,135,68,28,116,337,	0,4420,4621,5734,6247,8472,9299,10817,13610,13928,18323,19701,20184,
#Partially deleted in new
chr16	89854321	89856061	chr16:89854321-89856061	0	+	89854321	89854321	8553170	3	45,165,462,	0,165,1278,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	89861965	89870407	chr16:89861965-89870407	0	+	89861965	89861965	8553170	5	1645,68,28,116,358,	0,1828,6223,7601,8084,
#Partially deleted in new
chr16	89863441	89870201	chr16:89863441-89870201	0	+	89863441	89863441	8553170	4	169,68,116,152,	0,352,6125,6608,
#Partially deleted in new
chr16	89873569	89913627	chr16:89873569-89913627	0	+	89873667	89911238	789624	20	290,162,75,119,66,83,131,100,94,93,106,160,88,159,91,80,73,171,151,396,	0,9781,11012,12278,14082,18623,20158,21468,22420,24987,25197,27065,30548,31368,32624,33673,37021,37510,38925,39662,
#Partially deleted in new
chr16	89873585	89911384	chr16:89873585-89911384	1	+	89893735	89911216	789624	19	274,162,75,119,66,83,131,100,94,93,106,160,88,159,91,80,118,73,305,	0,9765,10996,12262,14066,18607,20142,21452,22404,24971,25181,27049,30532,31352,32608,33657,35380,37005,37494,
#Partially deleted in new
chr16	89873591	89884063	chr16:89873591-89884063	0	+	89873591	89873591	8553170	2	268,713,	0,9759,
#Partially deleted in new
chr16	89873605	89893767	chr16:89873605-89893767	0	+	89873667	89893767	789624	7	254,162,75,119,30,83,40,	0,9745,10976,12242,14046,18587,20122,
#Partially deleted in new
chr16	89873611	89911384	chr16:89873611-89911384	3	+	89873667	89911238	789624	18	248,162,75,119,66,83,131,100,94,93,106,160,88,159,91,80,73,305,	0,9739,10970,12236,14040,18581,20116,21426,22378,24945,25155,27023,30506,31326,32582,33631,36979,37468,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	89873640	89890633	chr16:89873640-89890633	1	+	89873667	89889264	789624	6	219,162,75,119,66,1406,	0,9710,10941,12207,14011,15587,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	89873642	89874855	chr16:89873642-89874855	0	+	89873642	89873642	8553170	2	217,57,	0,1156,
#Partially deleted in new
chr16	89873643	89892247	chr16:89873643-89892247	0	+	89873667	89878499	789624	7	216,167,162,75,119,66,55,	0,4817,9707,10938,12204,14008,18549,
#Partially deleted in new
chr16	89873643	89892275	chr16:89873643-89892275	0	+	89873667	89892275	789624	5	216,162,75,119,83,	0,9707,10938,12204,18549,
#Partially deleted in new
chr16	89873667	89896083	chr16:89873667-89896083	0	+	89873667	89896083	789624	8	192,162,75,119,30,70,55,94,	0,9683,10914,12180,13984,20121,21415,22322,
#Partially deleted in new
chr16	89874549	89884613	chr16:89874549-89884613	0	+	89874549	89874549	8553170	4	200,167,162,32,	0,3911,8801,10032,
#Partially deleted in new
chr16	89883393	89886130	chr16:89883393-89886130	0	+	89883393	89886093	789624	3	119,75,283,	0,1188,2454,
#Partially deleted in new
chr16	89884641	89895137	chr16:89884641-89895137	0	+	89884641	89884641	8553170	5	15,119,66,83,100,	0,1206,3010,7551,10396,
#Partially deleted in new
chr16	89884643	89911384	chr16:89884643-89911384	0	+	89884643	89911216	789624	17	13,119,66,83,131,100,94,93,106,160,88,159,91,80,118,73,305,	0,1204,3008,7549,9084,10394,11346,13913,14123,15991,19474,20294,21550,22599,24322,25947,26436,
#Partially deleted in new
chr16	89887648	89904183	chr16:89887648-89904183	0	+	89887648	89904183	789624	9	69,83,131,55,94,93,106,160,66,	0,4544,6079,7434,8341,10908,11118,12986,16469,
#Deleted in new
chr16	89892192	89893907	chr16:89892192-89893907	0	+	89892192	89892192	8553170	2	83,180,	0,1535,
#Partially deleted in new
chr16	89894955	89900793	chr16:89894955-89900793	0	+	89894955	89894955	8553170	5	182,94,93,106,159,	0,1034,3601,3811,5679,
#Partially deleted in new
chr16	89895114	89901039	chr16:89895114-89901039	0	+	89895114	89895114	8553170	5	23,94,93,106,405,	0,875,3442,3652,5520,
#Partially deleted in new
chr16	89895989	89898835	chr16:89895989-89898835	0	+	89895989	89895989	8553170	2	94,279,	0,2567,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	89895989	89911350	chr16:89895989-89911350	0	+	89895989	89895989	8553170	9	94,93,106,160,979,91,80,73,271,	0,2567,2777,4645,8128,10204,11253,14601,15090,
#Partially deleted in new
chr16	89898600	89904975	chr16:89898600-89904975	0	+	89898600	89904975	789624	5	49,106,160,88,224,	0,166,2034,5517,6151,
#Partially deleted in new
chr16	89905008	89909174	chr16:89905008-89909174	0	+	89905008	89905008	8553170	4	88,91,80,209,	0,1185,2234,3957,
#Partially deleted in new
chr16	89906156	89918233	chr16:89906156-89918233	3	+	89906156	89906156	8553170	3	128,73,358,	0,4434,11719,
#Partially deleted in new
chr16	89908965	89911379	chr16:89908965-89911379	0	+	89908965	89911216	789624	3	142,73,300,	0,1625,2114,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	89909427	89911378	chr16:89909427-89911378	0	+	89909427	89909427	8553170	2	1236,299,	0,1652,
#Partially deleted in new
chr16	89909839	89911379	chr16:89909839-89911379	0	+	89909839	89909839	8553170	3	86,73,300,	0,751,1240,
#Partially deleted in new
chr16	89910292	89911379	chr16:89910292-89911379	0	+	89910292	89910292	8553170	3	64,73,300,	0,298,787,
#Partially deleted in new
chr16	89912118	89915168	chr16:89912118-89915168	0	+	89912118	89912118	8553170	2	527,1937,	0,1113,
#Partially deleted in new
chr16	89913417	89920973	chr16:89913417-89920973	1	+	89919258	89920788	789624	4	1723,172,1358,384,	0,4458,5433,7172,
#Partially deleted in new
chr16	89914846	89920951	chr16:89914846-89920951	3	+	89919258	89920212	789624	3	294,172,2101,	0,3029,4004,
#Partially deleted in new
chr16	89917878	89920977	chr16:89917878-89920977	1	+	89919258	89920212	789624	1	3099,	0,
#Partially deleted in new
chr16	89919164	89936092	chr16:89919164-89936092	3	+	89919258	89935804	789624	5	1044,148,109,111,1364,	0,1425,13406,14303,15564,
#Partially deleted in new
chr16	89919826	89922662	chr16:89919826-89922662	3	-	89919826	89919826	8553170	2	899,86,	0,2750,
#Partially deleted in new
chr16	89921391	89935235	chr16:89921391-89935235	0	+	89933517	89935235	789624	4	40,109,111,507,	0,11179,12076,13337,
#Partially deleted in new
chr16	89921850	89936091	chr16:89921850-89936091	1	+	89933517	89935804	0	4	395,109,111,1363,	0,10720,11617,12878,
#Partially deleted in new
chr16	89921915	89934806	chr16:89921915-89934806	0	+	89933517	89934806	789624	4	268,109,111,78,	0,10655,11552,12813,
#Partially deleted in new
chr16	89923278	89936097	chr16:89923278-89936097	3	+	89923401	89935804	0	4	180,109,111,1369,	0,9292,10189,11450,
#Partially deleted in new
chr16	89923278	89934499	chr16:89923278-89934499	1	+	89923401	89934499	789624	4	180,109,111,170,	0,9292,10189,11051,
#Partially deleted in new
chr16	89923337	89934798	chr16:89923337-89934798	0	+	89923401	89931899	789624	5	121,139,109,111,70,	0,8463,9233,10130,11391,
#Partially deleted in new
chr16	89923341	89935070	chr16:89923341-89935070	0	+	89923401	89934499	789624	5	117,109,111,246,342,	0,9229,10126,10988,11387,
#Partially deleted in new
chr16	89923344	89932108	chr16:89923344-89932108	0	+	89923344	89923344	8553170	2	114,428,	0,8336,
#Partially deleted in new
chr16	89923344	89933017	chr16:89923344-89933017	0	+	89923344	89923344	8553170	2	114,447,	0,9226,
#Partially deleted in new
chr16	89923344	89938761	chr16:89923344-89938761	1	+	89923401	89938540	789624	4	114,109,111,238,	0,9226,10123,15179,
#Partially deleted in new
chr16	89923344	89934138	chr16:89923344-89934138	0	+	89923401	89931899	789624	5	114,139,109,111,415,	0,8456,9226,10123,10379,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	89923344	89934971	chr16:89923344-89934971	0	+	89923401	89933236	789624	5	114,109,229,111,243,	0,9226,9794,10123,11384,
#Partially deleted in new
chr16	89923353	89934301	chr16:89923353-89934301	1	+	89923401	89933803	789624	4	105,109,111,578,	0,9217,10114,10370,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	89923358	89936010	chr16:89923358-89936010	0	+	89923401	89933116	789624	5	100,109,253,111,1282,	0,9212,9756,10109,11370,
#Partially deleted in new
chr16	89923365	89934001	chr16:89923365-89934001	1	+	89923401	89933796	789624	3	93,109,534,	0,9205,10102,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr16	89947924	89968060	chr16:89947924-89968060	3	+	89954252	89965963	789624	13	890,97,134,98,150,142,165,128,114,81,141,110,2200,	0,1492,6318,7244,9586,11089,13006,13812,14087,15438,16245,16541,17936,
#Partially deleted in new
chr16	89948696	89959091	chr16:89948696-89959091	0	+	89954252	89959091	789624	5	118,134,98,150,78,	0,5546,6472,8814,10317,
#Partially deleted in new
chr16	89948730	89959363	chr16:89948730-89959363	1	+	89954252	89959235	789624	5	84,134,98,150,350,	0,5512,6438,8780,10283,
#Partially deleted in new
chr16	89948730	89968059	chr16:89948730-89968059	1	+	89954252	89965963	789624	14	84,97,240,134,98,150,142,165,128,114,81,141,110,2199,	0,686,1336,5512,6438,8780,10283,12200,13006,13281,14632,15439,15735,17130,
#Partially deleted in new
chr16	89948754	89959048	chr16:89948754-89959048	0	+	89954252	89957574	789624	6	60,97,134,98,188,35,	0,662,5488,6414,8718,10259,
#Partially deleted in new
chr16	89948754	89960965	chr16:89948754-89960965	0	+	89948796	89960965	789624	6	60,88,98,150,142,35,	0,5534,6414,8756,10259,12176,
#Partially deleted in new
chr16	89948754	89959039	chr16:89948754-89959039	0	+	89949465	89959039	789624	6	60,94,88,98,150,26,	0,665,5534,6414,8756,10259,
#Partially deleted in new
chr16	89948754	89959050	chr16:89948754-89959050	0	+	89954252	89959050	789624	6	60,97,134,98,123,37,	0,662,5488,6414,8783,10259,
#Partially deleted in new
chr16	89948774	89968060	chr16:89948774-89968060	1	+	89949465	89965963	789624	13	40,222,134,98,150,142,165,128,114,81,141,110,2200,	0,642,5468,6394,8736,10239,12156,12962,13237,14588,15395,15691,17086,
#Partially deleted in new
chr16	89948774	89959097	chr16:89948774-89959097	0	+	89948796	89959097	789624	6	40,74,134,98,150,84,	0,790,5468,6394,8736,10239,
#Partially deleted in new
chr16	89948778	89960972	chr16:89948778-89960972	0	+	89955224	89960972	789624	5	36,98,150,142,42,	0,6390,8732,10235,12152,
#Partially deleted in new
chr16	89948790	89966066	chr16:89948790-89966066	1	+	89954252	89965963	789624	14	24,97,262,134,98,150,142,165,128,114,81,141,110,206,	0,626,1276,5452,6378,8720,10223,12140,12946,13221,14572,15379,15675,17070,
#Partially deleted in new
chr16	89948794	89959366	chr16:89948794-89959366	1	+	89954252	89959235	789624	6	20,97,134,98,150,353,	0,622,5448,6374,8716,10219,
#Partially deleted in new
chr16	89948794	89965906	chr16:89948794-89965906	0	+	89954252	89965906	789624	6	20,134,98,150,110,46,	0,5448,6374,8716,15671,17066,
#Partially deleted in new
chr16	89948794	89966168	chr16:89948794-89966168	1	+	89955224	89965963	789624	12	20,97,98,150,142,165,128,114,81,141,110,308,	0,622,6374,8716,10219,12136,12942,13217,14568,15375,15671,17066,
#Partially deleted in new
chr16	89948794	89957608	chr16:89948794-89957608	0	+	89954252	89957608	789624	6	20,97,125,134,98,98,	0,622,3763,5448,6374,8716,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr16	89948794	89956887	chr16:89948794-89956887	0	+	89948794	89948794	8553170	5	20,97,134,98,194,	0,622,5448,6374,7899,
#Partially deleted in new
chr16	89948794	89959044	chr16:89948794-89959044	0	+	89954252	89959044	789624	7	20,97,121,134,98,150,31,	0,622,3767,5448,6374,8716,10219,
#Partially deleted in new
chr16	89948794	89958041	chr16:89948794-89958041	0	+	89948794	89948794	8553170	6	20,97,134,98,150,40,	0,622,5448,6374,8716,9207,
#Partially deleted in new
chr16	89948794	89968059	chr16:89948794-89968059	1	+	89954252	89965963	789624	13	20,97,134,98,120,142,165,128,114,81,141,110,2199,	0,622,5448,6374,8746,10219,12136,12942,13217,14568,15375,15671,17066,
#Partially deleted in new
chr16	89948802	89966306	chr16:89948802-89966306	1	+	89954252	89965963	789624	13	12,97,134,98,150,142,165,128,114,81,90,110,446,	0,614,5440,6366,8708,10211,12128,12934,13209,14560,15418,15663,17058,
#Deleted in new
chr16	89954171	89955242	chr16:89954171-89955242	0	+	89954252	89955242	789624	2	205,74,	0,997,
#Partially deleted in new
chr16	89957252	89960959	chr16:89957252-89960959	0	+	89957252	89957252	8553170	3	408,142,29,	0,1761,3678,
#Deleted in new
chr16	89958350	89959365	chr16:89958350-89959365	0	+	89958350	89958350	8553170	2	183,352,	0,663,
#Partially deleted in new
chr16	89958431	89962123	chr16:89958431-89962123	0	+	89958431	89958431	8553170	5	102,142,165,128,112,	0,582,2499,3305,3580,
#Partially deleted in new
chr16	89962052	89966343	chr16:89962052-89966343	0	+	89962052	89962052	8553170	4	73,81,355,483,	0,1310,2168,3808,
#Partially deleted in new
chr16	89963797	89966044	chr16:89963797-89966044	0	+	89963797	89963797	8553170	4	89,90,110,184,	0,423,668,2063,
#Partially deleted in new
chr16	89963839	89967633	chr16:89963839-89967633	0	+	89963839	89963839	8553170	3	471,110,1773,	0,626,2021,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	89969772	89972832	chr16:89969772-89972832	3	-	89971358	89971922	789624	1	3060,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	89969790	89972534	chr16:89969790-89972534	0	-	89969790	89969790	8553170	1	2744,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	89969982	89971922	chr16:89969982-89971922	4	-	89969982	89969982	16724991	1	1940,	0,
#Partially deleted in new
chr16	89970047	89972185	chr16:89970047-89972185	0	-	89970047	89970047	8553170	2	316,257,	0,1881,
#Partially deleted in new
chr16	89972585	89996626	chr16:89972585-89996626	5	+	89972585	89972585	16724991	9	180,164,95,151,69,138,108,126,1934,	0,5053,7656,9187,11945,18280,20135,21182,22107,
#Partially deleted in new
chr16	89972585	89981886	chr16:89972585-89981886	5	+	89972585	89972585	16724991	4	180,69,95,114,	0,6224,7656,9187,
#Partially deleted in new
chr16	89972585	89979870	chr16:89972585-89979870	5	+	89972585	89972585	16724991	4	180,164,69,156,	0,5053,6224,7129,
#Partially deleted in new
chr16	89972588	89977955	chr16:89972588-89977955	4	+	89972588	89972588	16724991	2	177,317,	0,5050,
#Partially deleted in new
chr16	89972592	89996623	chr16:89972592-89996623	4	+	89972592	89972592	16724991	10	173,125,69,95,151,87,138,108,126,1931,	0,5085,6217,7649,9180,11938,18273,20128,21175,22100,
#Partially deleted in new
chr16	89972592	89996623	chr16:89972592-89996623	4	+	89972592	89972592	16724991	10	173,125,69,95,151,69,138,108,126,1865,	0,5085,6217,7649,9180,11938,18273,20128,21175,22166,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	89972593	89978517	chr16:89972593-89978517	4	+	89972593	89972593	16724991	2	172,840,	0,5084,
#Partially deleted in new
chr16	89972616	89996623	chr16:89972616-89996623	4	+	89972616	89972616	16724991	11	149,198,69,95,151,69,100,138,108,126,1931,	0,4988,6193,7625,9156,11914,16235,18249,20104,21151,22076,
#Partially deleted in new
chr16	89972630	90000668	chr16:89972630-90000668	7	+	89972630	89972630	16724991	17	135,164,69,95,151,69,125,270,138,155,108,126,110,116,201,195,220,	0,5008,6179,7611,9142,11900,12815,16051,18235,18598,20090,21137,24152,26565,27193,27472,27818,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr16	89972647	89984699	chr16:89972647-89984699	4	+	89972647	89972647	16724991	6	118,164,69,1035,151,169,	0,4991,6162,6654,9125,11883,
#Partially deleted in new
chr16	89977693	90000553	chr16:89977693-90000553	4	+	89977693	89977693	16724991	12	109,69,95,151,69,100,138,108,126,201,195,105,	0,1116,2548,4079,6837,11158,13172,15027,16074,22130,22409,22755,
#Partially deleted in new
chr16	89977693	89984701	chr16:89977693-89984701	4	+	89977693	89977693	16724991	4	109,95,151,171,	0,2548,4079,6837,
#Partially deleted in new
chr16	89977693	89984701	chr16:89977693-89984701	4	+	89977693	89977693	16724991	5	109,69,95,151,171,	0,1116,2548,4079,6837,
#Partially deleted in new
chr16	89980244	89996623	chr16:89980244-89996623	4	+	89980244	89980244	16724991	5	92,146,69,126,1865,	0,1528,4286,13523,14514,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr16	89988495	90000553	chr16:89988495-90000553	4	+	89988495	89988495	16724991	7	456,138,108,126,201,195,105,	0,2370,4225,5272,11328,11607,11953,
#Partially deleted in new
chr16	89990331	89996610	chr16:89990331-89996610	4	+	89990331	89990331	16724991	4	672,108,126,1852,	0,2389,3436,4427,
#Deleted in new
chr16	89998605	90002161	chr16:89998605-90002161	5	+	89998605	89998605	16724991	3	1419,195,1713,	0,1497,1843,
#Partially deleted in new
chr16	90004864	90019473	chr16:90004864-90019473	3	-	90006334	90019341	789624	4	1628,141,147,163,	0,3919,4419,14446,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	90004864	90010121	chr16:90004864-90010121	1	-	90006334	90010047	789624	4	1628,141,147,165,	0,3919,4419,5092,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	90004872	90010211	chr16:90004872-90010211	1	-	90006334	90009479	789624	3	1620,141,928,	0,3911,4411,
#Deleted in new
chr16	90004872	90007761	chr16:90004872-90007761	0	-	90004872	90004872	8553170	1	2889,	0,
#Partially deleted in new
chr16	90006188	90020128	chr16:90006188-90020128	1	-	90006334	90020118	789624	4	304,141,147,401,	0,2595,3095,13539,
#Deleted in new
chr16	90006218	90009072	chr16:90006218-90009072	0	-	90006218	90006218	8553170	2	274,289,	0,2565,
#Partially deleted in new
chr16	90006479	90019880	chr16:90006479-90019880	0	-	90011610	90019880	789624	5	13,141,147,113,153,	0,2304,2804,5104,13248,
#Partially deleted in new
chr16	90019628	90031252	chr16:90019628-90031252	0	+	90019628	90019628	8553170	5	140,82,160,87,77,	0,1201,2418,8007,11547,
#Partially deleted in new
chr16	90019636	90031406	chr16:90019636-90031406	0	+	90019636	90019636	8553170	4	132,113,87,217,	0,407,7999,11553,
#Partially deleted in new
chr16	90019642	90043472	chr16:90019642-90043472	1	+	90027707	90043345	789624	11	126,87,198,207,55,206,168,87,210,66,277,	0,7993,11656,13075,15990,16738,17589,18119,20657,22827,23553,
#Partially deleted in new
chr16	90019692	90032892	chr16:90019692-90032892	0	+	90019692	90019692	8553170	4	76,87,321,175,	0,7943,11483,13025,
#Partially deleted in new
chr16	90019729	90031499	chr16:90019729-90031499	0	+	90019729	90019729	8553170	4	39,87,14,201,	0,7906,11446,11569,
#Partially deleted in new
chr16	90019730	90032858	chr16:90019730-90032858	0	+	90031457	90032858	789624	3	38,307,141,	0,11459,12987,
#Partially deleted in new
chr16	90022085	90032790	chr16:90022085-90032790	0	+	90027707	90032790	789624	4	121,87,198,73,	0,5550,9213,10632,
#Partially deleted in new
chr16	90022599	90044971	chr16:90022599-90044971	3	+	90022721	90043345	789624	11	125,87,198,207,55,206,168,87,210,66,1776,	0,5036,8699,10118,13033,13781,14632,15162,17700,19870,20596,
#Partially deleted in new
chr16	90022599	90044971	chr16:90022599-90044971	1	+	90031457	90043345	789624	11	125,87,321,207,55,206,168,87,210,66,1776,	0,5036,8576,10118,13033,13781,14632,15162,17700,19870,20596,
#Partially deleted in new
chr16	90022652	90037046	chr16:90022652-90037046	0	+	90022721	90031435	789624	6	72,87,307,207,55,666,	0,4983,8537,10065,12980,13728,
#Partially deleted in new
chr16	90022663	90042428	chr16:90022663-90042428	0	+	90022663	90022663	8553170	9	61,198,207,55,206,168,87,210,116,	0,8635,10054,12969,13717,14568,15098,17636,19649,
#Partially deleted in new
chr16	90022669	90027996	chr16:90022669-90027996	0	+	90022669	90022669	8553170	2	55,361,	0,4966,
#Partially deleted in new
chr16	90022682	90036926	chr16:90022682-90036926	0	+	90022682	90022682	8553170	5	42,87,198,207,546,	0,4953,8616,10035,13698,
#Partially deleted in new
chr16	90022682	90044975	chr16:90022682-90044975	0	+	90022721	90031193	789624	10	42,87,321,207,206,168,87,210,66,1780,	0,4953,8493,10035,13698,14549,15079,17617,19787,20513,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr16	90028907	90029901	chr16:90028907-90029901	3	-	90028907	90028907	789624	1	994,	0,
#Deleted in new
chr16	90028934	90029367	chr16:90028934-90029367	0	-	90028934	90028934	8553170	1	433,	0,
#Partially deleted in new
chr16	90029540	90044961	chr16:90029540-90044961	0	+	90029540	90029540	8553170	9	139,307,207,55,1019,87,210,66,1766,	0,1649,3177,6092,6840,8221,10759,12929,13655,
#Deleted in new
chr16	90035731	90037347	chr16:90035731-90037347	0	+	90035731	90035731	8553170	3	148,206,116,	0,649,1500,
#Deleted in new
chr16	90035780	90036766	chr16:90035780-90036766	0	+	90035780	90035780	8553170	2	99,386,	0,600,
#Partially deleted in new
chr16	90036195	90040509	chr16:90036195-90040509	0	+	90036195	90036195	8553170	4	391,168,87,210,	0,1036,1566,4104,
#Partially deleted in new
chr16	90039760	90047625	chr16:90039760-90047625	7	-	90039760	90039760	16724991	5	657,342,122,140,88,	0,3887,4741,7196,7777,
#Partially deleted in new
chr16	90040042	90043472	chr16:90040042-90043472	0	+	90040042	90040042	8553170	3	467,66,277,	0,2427,3153,
#Deleted in new
chr16	90042376	90043472	chr16:90042376-90043472	0	+	90042376	90042376	8553170	2	159,277,	0,819,
#Partially deleted in new
chr16	90042901	90047773	chr16:90042901-90047773	5	-	90042901	90042901	16724991	4	1088,122,140,31,	0,1600,4055,4841,
#Deleted in new
chr16	90043428	90044610	chr16:90043428-90044610	4	-	90043428	90043428	16724991	3	561,120,109,	0,685,1073,
#Partially deleted in new
chr16	90043801	90047190	chr16:90043801-90047190	4	-	90043801	90043801	16724991	3	188,122,234,	0,700,3155,
#Partially deleted in new
chr16	90043913	90047597	chr16:90043913-90047597	5	-	90043913	90043913	16724991	4	76,122,140,60,	0,588,3043,3624,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	90056565	90062325	chr16:90056565-90062325	0	-	90056565	90056565	8553170	3	1969,68,405,	0,4886,5355,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr16	90056567	90075930	chr16:90056567-90075930	1	-	90058288	90075910	789624	10	1967,283,68,272,102,157,50,108,124,89,	0,3773,4884,5353,5833,7044,10293,18348,18783,19274,
#Partially deleted in new
chr16	90057779	90077323	chr16:90057779-90077323	3	-	90058288	90075910	789624	11	755,283,68,272,102,157,50,108,124,154,98,	0,2561,3672,4141,4621,5832,9081,17136,17571,18062,19446,
#Partially deleted in new
chr16	90061451	90075925	chr16:90061451-90075925	0	-	90062126	90075910	789624	6	68,272,50,108,124,84,	0,469,5409,13464,13899,14390,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	90075004	90092072	chr16:90075004-90092072	0	-	90075004	90075004	8553170	4	19,110,98,466,	0,8141,11768,16602,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	90093153	90096354	chr16:90093153-90096354	7	+	90093153	90093153	16724991	3	700,194,1221,	0,1188,1980,
#Deleted in new
chr16	90094022	90096189	chr16:90094022-90096189	4	+	90094022	90094022	16724991	4	57,109,301,1056,	0,319,506,1111,
#Deleted in new
chr16	90094022	90096158	chr16:90094022-90096158	4	+	90094022	90094022	16724991	4	57,109,111,1025,	0,319,506,1111,
#Deleted in new
chr16	90094022	90096188	chr16:90094022-90096188	5	+	90094022	90094022	16724991	4	57,109,111,1055,	0,319,506,1111,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr16	90102270	90137993	chr16:90102270-90137993	1	+	90102270	90102270	8553170	9	172,547,196,110,132,216,66,59,308,	0,3888,14017,26352,27526,30948,32048,34271,35415,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	90105094	90106316	chr16:90105094-90106316	3	-	90105094	90105094	8553170	2	52,364,	0,858,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	90106460	90177606	chr16:90106460-90177606	2	+	90106460	90106460	8553170	3	245,66,169,	0,4911,70977,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	90110573	90168225	chr16:90110573-90168225	3	-	90110573	90110573	8553170	3	235,119,235,	0,15396,57417,
#Deleted in new
chr16	90116199	90126022	chr16:90116199-90126022	1	-	90116199	90116199	8553170	2	363,53,	0,9770,
#Deleted in new
chr16	90144591	90144695	chr16:90144591-90144695	3	+	90144591	90144591	8553170	1	104,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr16	90157931	90178344	chr16:90157931-90178344	1	+	90157931	90157931	8553170	8	124,197,65,686,58,231,195,628,	0,460,1501,3752,4665,4816,5832,19785,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	90158171	90159576	chr16:90158171-90159576	0	+	90158171	90158171	8553170	2	417,144,	0,1261,
#Partially deleted in new
chr16	90173216	90186204	chr16:90173216-90186204	1	+	90173216	90173216	8553170	4	350,169,59,145,	0,4500,12780,12843,
#Deleted in new
chr16	90174061	90175865	chr16:90174061-90175865	7	-	90174061	90174061	16724991	1	1804,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr16	90185996	90216935	chr16:90185996-90216935	3	+	90185996	90185996	8553170	4	158,105,150,1643,	0,8124,28685,29296,
#Partially deleted in new
chr16	90214772	90215362	chr16:90214772-90215362	0	+	90214772	90214772	8553170	2	59,70,	0,520,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr16	90215825	90222666	chr16:90215825-90222666	0	+	90215825	90215825	8553170	2	373,281,	0,6560,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr16	90215871	90222678	chr16:90215871-90222678	0	+	90215871	90215871	8553170	3	327,49,290,	0,6372,6517,
#Partially deleted in new
chr16	90216027	90219464	chr16:90216027-90219464	0	+	90216027	90216027	8553170	2	171,206,	0,3231,
#Deleted in new
chr16	90221447	90222508	chr16:90221447-90222508	1	+	90221447	90221447	8553170	3	550,49,120,	0,796,941,
#Deleted in new
chr16_GL383556v1_alt	421	17854	chr16_GL383556v1_alt:421-17854	7	+	421	421	16724991	9	108,104,39,141,84,148,132,73,181,	0,840,3517,7436,9470,9816,14020,16883,17252,
#Deleted in new
chr16_GL383556v1_alt	26723	36852	chr16_GL383556v1_alt:26723-36852	0	-	30274	36852	789624	4	382,73,132,72,	0,678,3482,10057,
#Deleted in new
chr16_GL383556v1_alt	26726	57019	chr16_GL383556v1_alt:26726-57019	1	-	26921	56960	0	14	379,73,132,148,84,141,39,105,108,154,134,145,205,111,	0,675,3479,7667,8077,10054,14075,16686,17523,18519,20701,23302,25921,30182,
#Deleted in new
chr16_GL383556v1_alt	26726	57055	chr16_GL383556v1_alt:26726-57055	1	-	26921	56960	0	14	379,73,132,148,84,141,39,105,108,154,134,145,208,147,	0,675,3479,7667,8077,10054,14075,16686,17523,18519,20701,23302,25921,30182,
#Deleted in new
chr16_GL383556v1_alt	26726	57055	chr16_GL383556v1_alt:26726-57055	3	-	26921	56960	0	14	379,73,132,148,81,141,39,105,108,154,134,145,205,147,	0,675,3479,7667,8077,10054,14075,16686,17523,18519,20701,23302,25921,30182,
#Deleted in new
chr16_GL383556v1_alt	26808	34541	chr16_GL383556v1_alt:26808-34541	0	-	26921	34541	789624	3	297,73,148,	0,593,7585,
#Deleted in new
chr16_GL383556v1_alt	34447	43458	chr16_GL383556v1_alt:34447-43458	0	-	36281	43458	789624	6	94,84,95,141,39,46,	0,356,1766,2333,6354,8965,
#Deleted in new
chr16_GL383556v1_alt	43881	57001	chr16_GL383556v1_alt:43881-57001	0	-	43881	43881	8553170	5	476,154,134,145,93,	0,1364,3546,6147,13027,
#Deleted in new
chr16_GL383556v1_alt	44206	57009	chr16_GL383556v1_alt:44206-57009	0	-	44206	44206	8553170	4	151,154,134,101,	0,1039,3221,12702,
#Deleted in new
chr16_GL383556v1_alt	45306	52056	chr16_GL383556v1_alt:45306-52056	0	-	45306	45306	8553170	4	93,134,145,287,	0,2121,4722,6463,
#Deleted in new
chr16_GL383556v1_alt	70050	149355	chr16_GL383556v1_alt:70050-149355	0	-	93523	95640	789624	13	529,73,150,148,69,141,105,105,154,266,139,205,104,	0,614,3471,6729,10225,13395,15258,17194,19808,23345,25491,27699,79201,
#Deleted in new
chr16_GL383556v1_alt	70050	179945	chr16_GL383556v1_alt:70050-179945	3	-	70347	179799	789624	14	529,73,150,148,69,141,105,105,154,134,139,205,118,188,	0,614,3471,6729,10225,13395,15258,17194,19808,23477,25491,27699,103648,109707,
#Deleted in new
chr16_GL383556v1_alt	70058	149389	chr16_GL383556v1_alt:70058-149389	1	-	70347	95640	789624	13	521,73,150,148,69,141,105,105,154,134,139,215,138,	0,606,3463,6721,10217,13387,15250,17186,19800,23469,25483,27681,79193,
#Deleted in new
chr16_GL383556v1_alt	70058	99287	chr16_GL383556v1_alt:70058-99287	1	-	70347	99138	789624	12	521,73,148,69,141,105,105,154,134,139,205,222,	0,606,6721,10217,13387,15250,17186,19800,23469,25483,27691,29007,
#Deleted in new
chr16_GL383556v1_alt	70113	99260	chr16_GL383556v1_alt:70113-99260	1	-	70347	99138	789624	13	466,73,150,148,69,141,105,105,154,134,139,205,195,	0,551,3408,6666,10162,13332,15195,17131,19745,23414,25428,27636,28952,
#Deleted in new
chr16_GL383556v1_alt	70115	99216	chr16_GL383556v1_alt:70115-99216	1	-	70347	99138	789624	13	464,73,150,148,69,141,105,105,154,134,49,205,151,	0,549,3406,6664,10160,13330,15193,17129,19743,23412,25516,27634,28950,
#Deleted in new
chr16_GL383556v1_alt	70115	168378	chr16_GL383556v1_alt:70115-168378	1	-	70347	168009	789624	9	464,73,150,148,66,141,105,105,417,	0,549,3406,6664,10160,13330,15193,17129,97846,
#Deleted in new
chr16_GL383556v1_alt	70290	95758	chr16_GL383556v1_alt:70290-95758	0	-	70290	70290	8553170	8	289,73,150,148,141,105,134,27,	0,374,3231,6489,13155,16954,23237,25441,
#Deleted in new
chr16_GL383556v1_alt	93535	149355	chr16_GL383556v1_alt:93535-149355	0	-	93535	95640	789624	4	126,139,205,104,	0,2006,4214,55716,
#Deleted in new
chr16_GL383557v1_alt	38607	38708	chr16_GL383557v1_alt:38607-38708	3	-	38607	38607	8553170	1	101,	0,
#Deleted in new
chr16_GL383557v1_alt	42083	42701	chr16_GL383557v1_alt:42083-42701	3	-	42083	42663	789624	1	618,	0,
#Deleted in new
chr16_GL383557v1_alt	42083	42683	chr16_GL383557v1_alt:42083-42683	0	-	42083	42663	789624	1	600,	0,
#Deleted in new
chr16_GL383557v1_alt	42083	42188	chr16_GL383557v1_alt:42083-42188	0	-	42083	42083	8553170	1	105,	0,
#Deleted in new
chr16_GL383557v1_alt	42083	42269	chr16_GL383557v1_alt:42083-42269	0	-	42083	42269	789624	1	186,	0,
#Deleted in new
chr16_GL383557v1_alt	42083	42269	chr16_GL383557v1_alt:42083-42269	0	-	42083	42269	789624	1	186,	0,
#Deleted in new
chr16_GL383557v1_alt	42096	42245	chr16_GL383557v1_alt:42096-42245	0	-	42096	42245	789624	1	149,	0,
#Deleted in new
chr16_GL383557v1_alt	54054	54161	chr16_GL383557v1_alt:54054-54161	3	+	54054	54054	8553170	1	107,	0,
#Deleted in new
chr16_GL383557v1_alt	60797	75401	chr16_GL383557v1_alt:60797-75401	0	-	60898	75401	789624	6	218,96,107,157,123,36,	0,5847,8562,11785,13032,14568,
#Deleted in new
chr16_GL383557v1_alt	60814	86645	chr16_GL383557v1_alt:60814-86645	0	-	60898	86645	789624	12	201,111,186,96,107,157,123,65,97,92,172,212,	0,1832,3491,5830,8545,11768,13015,14551,15328,18104,18300,25619,
#Deleted in new
chr16_GL383557v1_alt	60815	86645	chr16_GL383557v1_alt:60815-86645	0	-	60898	86645	789624	9	200,111,186,96,107,97,92,172,212,	0,1831,3490,5829,8544,15327,18103,18299,25618,
#Deleted in new
chr16_GL383557v1_alt	60815	86645	chr16_GL383557v1_alt:60815-86645	2	-	60898	86645	789624	12	200,111,186,96,107,157,123,65,97,92,172,212,	0,1831,3490,5829,8544,11767,13014,14550,15327,18103,18299,25618,
#Deleted in new
chr16_GL383557v1_alt	61998	86645	chr16_GL383557v1_alt:61998-86645	1	-	64260	86645	789624	10	2493,96,107,157,123,65,97,92,172,212,	0,4646,7361,10584,11831,13367,14144,16920,17116,24435,
#Deleted in new
chr16_GL383557v1_alt	79114	87707	chr16_GL383557v1_alt:79114-87707	0	-	79114	79114	8553170	3	172,212,184,	0,7319,8409,
#Deleted in new
chr16_GL383557v1_alt	79188	86645	chr16_GL383557v1_alt:79188-86645	0	-	79188	79188	8553170	2	98,212,	0,7245,
#Deleted in new
chr16_GL383557v1_alt	86433	86645	chr16_GL383557v1_alt:86433-86645	0	-	86433	86645	789624	1	212,	0,
#Deleted in new
chr16_GL383557v1_alt	86494	86645	chr16_GL383557v1_alt:86494-86645	0	-	86494	86645	789624	1	151,	0,
#Deleted in new
chr16_GL383557v1_alt	86522	86645	chr16_GL383557v1_alt:86522-86645	0	-	86522	86522	8553170	1	123,	0,
#Deleted in new
chr16_KI270728v1_random	17233	19833	chr16_KI270728v1_random:17233-19833	3	+	17263	18366	8553170	2	268,1538,	0,1062,
#Deleted in new
chr16_KI270728v1_random	137797	139135	chr16_KI270728v1_random:137797-139135	7	+	137797	137797	16724991	1	1338,	0,
#Deleted in new
chr16_KI270728v1_random	933861	936467	chr16_KI270728v1_random:933861-936467	3	-	934881	936436	8553170	2	1033,393,	0,2213,
#Deleted in new
chr16_KI270728v1_random	1109944	1110235	chr16_KI270728v1_random:1109944-1110235	7	+	1109944	1109944	16724991	1	291,	0,
#Deleted in new
chr16_KI270728v1_random	1139576	1146654	chr16_KI270728v1_random:1139576-1146654	1	-	1140964	1145729	8553170	14	1529,171,101,103,138,113,125,104,135,24,106,250,132,89,	0,1710,1963,2150,2329,2579,3010,3225,3416,4487,4514,5063,6104,6989,
#Deleted in new
chr16_KI270728v1_random	1139576	1147868	chr16_KI270728v1_random:1139576-1147868	3	-	1140964	1147590	8553170	15	1529,171,101,103,138,113,125,104,135,24,106,250,132,103,437,	0,1710,1963,2150,2329,2579,3010,3225,3416,4487,4514,5063,6104,7748,7855,
#Deleted in new
chr16_KI270728v1_random	1157686	1240349	chr16_KI270728v1_random:1157686-1240349	3	+	1157686	1240349	8553170	3	71,55,159,	0,82446,82504,
#Deleted in new
chr16_KI270728v1_random	1167456	1209276	chr16_KI270728v1_random:1167456-1209276	1	+	1167456	1209276	8553170	4	13,41,271,11,	0,11753,11795,41809,
#Deleted in new
chr16_KI270728v1_random	1179290	1257196	chr16_KI270728v1_random:1179290-1257196	3	+	1179290	1257196	8553170	2	88,137,	0,77769,
#Deleted in new
chr16_KI270728v1_random	1270983	1271271	chr16_KI270728v1_random:1270983-1271271	3	+	1270983	1271271	8553170	1	288,	0,
#Deleted in new
chr16_KI270853v1_alt	8557	203123	chr16_KI270853v1_alt:8557-203123	3	-	9573	202981	0	24	1072,194,190,75,87,56,70,111,76,43,44,78,57,81,43,39,66,166,61,82,68,80,78,161,	0,11187,46937,116320,118364,119953,145173,146480,148646,149048,150617,157600,164203,168445,170783,172580,173357,174943,181888,191404,191567,192470,193895,194405,
#Deleted in new
chr16_KI270853v1_alt	9129	203115	chr16_KI270853v1_alt:9129-203115	1	-	9573	202981	0	23	500,194,190,75,87,56,70,111,76,43,44,78,57,81,43,39,66,166,61,31,61,78,153,	0,10615,46365,115748,117792,119381,144601,145908,148074,148476,150045,157028,163631,167873,170211,172008,172785,174371,181316,190832,191917,193323,193833,
#Deleted in new
chr16_KI270853v1_alt	9461	203132	chr16_KI270853v1_alt:9461-203132	1	-	9573	200186	0	24	168,194,190,75,87,56,70,111,76,43,44,78,57,81,43,39,66,166,61,82,68,80,78,87,	0,10283,46033,115416,117460,119049,144269,145576,147742,148144,149713,156696,163299,167541,169879,171676,172453,174039,180984,190500,190663,191566,192991,193584,
#Deleted in new
chr16_KI270853v1_alt	9524	203094	chr16_KI270853v1_alt:9524-203094	1	-	9573	202981	0	17	105,194,190,75,87,56,70,111,76,43,44,78,57,81,80,78,132,	0,10220,45970,115353,117397,118986,144206,145513,147679,148081,149650,156633,163236,167478,191503,192928,193438,
#Deleted in new
chr16_KI270853v1_alt	19813	74546	chr16_KI270853v1_alt:19813-74546	0	-	19813	19813	8553170	3	125,190,137,	0,35681,54596,
#Deleted in new
chr16_KI270853v1_alt	55494	137932	chr16_KI270853v1_alt:55494-137932	0	-	55494	55494	8553170	5	190,75,87,56,60,	0,69383,71427,73016,82378,
#Deleted in new
chr16_KI270853v1_alt	128510	164934	chr16_KI270853v1_alt:128510-164934	0	-	128510	128510	8553170	7	56,70,111,76,43,44,165,	0,25220,26527,28693,29095,30664,36259,
#Deleted in new
chr16_KI270853v1_alt	128510	183600	chr16_KI270853v1_alt:128510-183600	0	-	128510	183600	789624	12	56,70,111,76,43,44,78,57,43,39,66,100,	0,25220,26527,28693,29095,30664,37647,44250,50830,52627,53404,54990,
#Deleted in new
chr16_KI270853v1_alt	128542	157617	chr16_KI270853v1_alt:128542-157617	0	-	128542	128542	8553170	7	24,117,98,70,111,76,12,	0,2687,22845,25188,26495,28661,29063,
#Deleted in new
chr16_KI270853v1_alt	148928	157648	chr16_KI270853v1_alt:148928-157648	0	-	148928	148928	8553170	5	205,70,111,76,43,	0,4802,6109,8275,8677,
#Deleted in new
chr16_KI270853v1_alt	159174	203116	chr16_KI270853v1_alt:159174-203116	0	-	200022	202981	789624	13	44,78,57,81,43,39,66,166,61,82,80,78,154,	0,6983,13586,17828,20166,21963,22740,24326,31271,40787,41853,43278,43788,
#Deleted in new
chr16_KI270853v1_alt	172791	203074	chr16_KI270853v1_alt:172791-203074	0	-	177067	202981	789624	11	26,81,39,66,166,61,31,68,80,78,112,	0,4211,8346,9123,10709,17654,27170,27333,28236,29661,30171,
#Deleted in new
chr16_KI270853v1_alt	174679	174951	chr16_KI270853v1_alt:174679-174951	3	-	174679	174679	8553170	1	272,	0,
#Deleted in new
chr16_KI270853v1_alt	180963	183556	chr16_KI270853v1_alt:180963-183556	0	-	180963	180963	8553170	3	213,66,56,	0,951,2537,
#Deleted in new
chr16_KI270853v1_alt	183521	203107	chr16_KI270853v1_alt:183521-203107	0	-	183521	183521	8553170	6	145,82,68,80,78,145,	0,16440,16603,17506,18931,19441,
#Deleted in new
chr16_KI270853v1_alt	200031	205584	chr16_KI270853v1_alt:200031-205584	0	-	200031	205336	789624	5	12,68,80,78,339,	0,93,996,2421,5214,
#Deleted in new
chr16_KI270853v1_alt	205670	242094	chr16_KI270853v1_alt:205670-242094	3	+	217202	240685	789624	8	204,336,205,170,145,174,203,1602,	0,11459,15573,16989,22251,29079,32056,34822,
#Deleted in new
chr16_KI270853v1_alt	205786	241208	chr16_KI270853v1_alt:205786-241208	1	+	217202	240685	789624	6	88,336,145,174,203,716,	0,11343,22135,28963,31940,34706,
#Deleted in new
chr16_KI270853v1_alt	205786	223412	chr16_KI270853v1_alt:205786-223412	0	+	205786	205786	8553170	3	88,336,753,	0,11343,16873,
#Deleted in new
chr16_KI270853v1_alt	205787	223445	chr16_KI270853v1_alt:205787-223445	1	+	217202	222833	789624	4	87,336,205,786,	0,11342,15456,16872,
#Deleted in new
chr16_KI270853v1_alt	205798	228027	chr16_KI270853v1_alt:205798-228027	0	+	205798	205798	8553170	4	76,336,205,106,	0,11331,15445,22123,
#Deleted in new
chr16_KI270853v1_alt	205829	237877	chr16_KI270853v1_alt:205829-237877	0	+	217202	234756	789624	4	45,336,174,151,	0,11300,28920,31897,
#Deleted in new
chr16_KI270853v1_alt	206018	221308	chr16_KI270853v1_alt:206018-221308	0	+	217202	221308	789624	3	321,336,65,	0,11111,15225,
#Deleted in new
chr16_KI270853v1_alt	216643	216705	chr16_KI270853v1_alt:216643-216705	3	+	216643	216643	8553170	1	62,	0,
#Deleted in new
chr16_KI270853v1_alt	217143	240926	chr16_KI270853v1_alt:217143-240926	0	+	217202	222822	789624	6	322,170,145,174,203,434,	0,5516,10778,17606,20583,23349,
#Deleted in new
chr16_KI270853v1_alt	221399	240695	chr16_KI270853v1_alt:221399-240695	0	+	221399	240685	789624	4	49,174,203,203,	0,13350,16327,19093,
#Deleted in new
chr16_KI270853v1_alt	234821	238039	chr16_KI270853v1_alt:234821-238039	0	+	234821	237933	789624	2	102,313,	0,2905,
#Deleted in new
chr16_KI270853v1_alt	234887	242089	chr16_KI270853v1_alt:234887-242089	0	+	234887	241945	789624	3	36,203,199,	0,2839,7003,
#Deleted in new
chr16_KI270853v1_alt	240177	242090	chr16_KI270853v1_alt:240177-242090	0	+	240177	240177	8553170	2	573,200,	0,1713,
#Deleted in new
chr16_KI270853v1_alt	245403	267531	chr16_KI270853v1_alt:245403-267531	3	-	245465	267091	0	4	205,107,151,537,	0,15620,17950,21591,
#Deleted in new
chr16_KI270853v1_alt	245539	267138	chr16_KI270853v1_alt:245539-267138	0	-	251581	267091	789624	5	69,116,107,151,144,	0,5964,15484,17814,21455,
#Deleted in new
chr16_KI270853v1_alt	268428	279917	chr16_KI270853v1_alt:268428-279917	3	-	268428	268428	8553170	3	399,82,98,	0,6207,11391,
#Deleted in new
chr16_KI270853v1_alt	281805	297641	chr16_KI270853v1_alt:281805-297641	1	+	281805	297641	789624	7	120,129,100,145,108,61,291,	0,7124,10883,11146,14249,15375,15545,
#Deleted in new
chr16_KI270853v1_alt	281805	299201	chr16_KI270853v1_alt:281805-299201	3	+	281805	299156	8553170	8	120,129,100,145,108,61,36,456,	0,7124,10883,11146,14249,15375,15545,16940,
#Deleted in new
chr16_KI270853v1_alt	284550	299156	chr16_KI270853v1_alt:284550-299156	1	+	284550	299156	789624	8	63,129,100,145,108,61,36,411,	0,4379,8138,8401,11504,12630,12800,14195,
#Deleted in new
chr16_KI270853v1_alt	511708	511808	chr16_KI270853v1_alt:511708-511808	3	-	511708	511708	8553170	1	100,	0,
#Deleted in new
chr16_KI270853v1_alt	525351	527204	chr16_KI270853v1_alt:525351-527204	5	+	525351	525351	16724991	4	288,184,107,126,	0,406,1401,1727,
#Deleted in new
chr16_KI270853v1_alt	526528	540016	chr16_KI270853v1_alt:526528-540016	5	+	526528	526528	16724991	19	331,150,144,280,214,160,153,145,621,157,253,196,168,144,211,127,117,50,87,	0,550,1634,1905,2276,2556,3106,6088,7019,7935,8272,8649,10337,10591,10829,11130,12919,13126,13401,
#Deleted in new
chr16_KI270853v1_alt	527094	565352	chr16_KI270853v1_alt:527094-565352	7	+	527094	527094	16724991	24	1212,280,214,160,386,145,621,157,253,196,168,144,211,127,117,129,129,100,145,108,61,36,70,368,	0,1339,1710,1990,2307,5522,6453,7369,7706,8083,9771,10025,10263,10564,12353,23600,28082,31831,32094,35202,36328,36498,37030,37890,
#Deleted in new
chr16_KI270853v1_alt	527354	529020	chr16_KI270853v1_alt:527354-529020	4	+	527354	527354	16724991	4	124,144,280,216,	0,808,1079,1450,
#Deleted in new
chr16_KI270853v1_alt	528662	529788	chr16_KI270853v1_alt:528662-529788	4	+	528662	528662	16724991	4	51,214,160,154,	0,142,422,972,
#Deleted in new
chr16_KI270853v1_alt	533755	538596	chr16_KI270853v1_alt:533755-538596	4	+	533755	533755	16724991	8	426,157,253,196,168,144,211,938,	0,708,1045,1422,3110,3364,3602,3903,
#Deleted in new
chr16_KI270853v1_alt	560536	575265	chr16_KI270853v1_alt:560536-575265	3	-	560536	560536	789624	4	1770,206,221,401,	0,2032,5780,14328,
#Deleted in new
chr16_KI270853v1_alt	575358	609658	chr16_KI270853v1_alt:575358-609658	3	+	575442	607936	789624	18	173,106,57,90,130,60,64,70,99,93,139,131,131,185,109,153,88,1884,	0,1703,2946,7857,8053,8613,9607,10731,14219,17665,19450,21231,23059,24056,26033,28949,31038,32416,
#Deleted in new
chr16_KI270853v1_alt	575364	609645	chr16_KI270853v1_alt:575364-609645	1	+	575442	609512	789624	19	167,106,57,90,130,60,64,70,99,93,139,131,131,185,109,153,88,117,139,	0,1697,2940,7851,8047,8607,9601,10725,14213,17659,19444,21225,23053,24050,26027,28943,31032,32410,34142,
#Deleted in new
chr16_KI270853v1_alt	575422	593239	chr16_KI270853v1_alt:575422-593239	1	+	575442	593176	789624	10	109,106,57,90,130,60,64,70,99,216,	0,1639,2882,7793,7989,8549,9543,10667,14155,17601,
#Deleted in new
chr16_KI270853v1_alt	575426	608252	chr16_KI270853v1_alt:575426-608252	1	+	575442	607936	789624	17	105,106,57,130,60,64,70,99,93,139,131,131,185,109,153,88,478,	0,1635,2878,7985,8545,9539,10663,14151,17597,19382,21163,22991,23988,25965,28881,30970,32348,
#Deleted in new
chr16_KI270853v1_alt	575667	608051	chr16_KI270853v1_alt:575667-608051	1	+	577071	607936	789624	18	57,106,57,90,130,60,64,70,99,93,139,131,131,185,109,153,88,277,	0,1394,2637,7548,7744,8304,9298,10422,13910,17356,19141,20922,22750,23747,25724,28640,30729,32107,
#Deleted in new
chr16_KI270853v1_alt	585921	594993	chr16_KI270853v1_alt:585921-594993	0	+	585921	585921	8553170	4	238,99,93,185,	0,3656,7102,8887,
#Deleted in new
chr16_KI270853v1_alt	613599	631833	chr16_KI270853v1_alt:613599-631833	3	+	622193	631656	789624	8	189,109,74,54,54,98,114,357,	0,8529,11671,14411,14966,16021,17400,17877,
#Deleted in new
chr16_KI270853v1_alt	613614	631834	chr16_KI270853v1_alt:613614-631834	1	+	613707	631656	789624	10	174,103,66,109,74,54,54,98,114,358,	0,7965,8144,8514,11656,14396,14951,16006,17385,17862,
#Deleted in new
chr16_KI270853v1_alt	613624	631113	chr16_KI270853v1_alt:613624-631113	0	+	622193	631113	789624	7	164,109,74,54,54,98,114,	0,8504,11646,14386,14941,15996,17375,
#Deleted in new
chr16_KI270853v1_alt	613639	631111	chr16_KI270853v1_alt:613639-631111	0	+	613707	631111	789624	9	149,22,66,109,74,54,54,98,112,	0,7940,8119,8489,11631,14371,14926,15981,17360,
#Deleted in new
chr16_KI270853v1_alt	613651	631813	chr16_KI270853v1_alt:613651-631813	0	+	613707	621815	789624	9	137,66,109,74,54,54,98,114,337,	0,8107,8477,11619,14359,14914,15969,17348,17825,
#Deleted in new
chr16_KI270853v1_alt	613735	622463	chr16_KI270853v1_alt:613735-622463	0	+	613735	613735	8553170	3	53,66,335,	0,8023,8393,
#Deleted in new
chr16_KI270853v1_alt	613761	628064	chr16_KI270853v1_alt:613761-628064	0	+	613761	621815	789624	5	27,66,133,74,54,	0,7997,8367,11509,14249,
#Deleted in new
chr16_KI270853v1_alt	613891	622251	chr16_KI270853v1_alt:613891-622251	0	+	613891	613891	8553170	4	47,103,66,123,	0,7688,7867,8237,
#Deleted in new
chr16_KI270853v1_alt	622184	631542	chr16_KI270853v1_alt:622184-631542	0	+	622184	628014	789624	6	53,54,54,98,114,66,	0,5826,6381,7436,8815,9292,
#Deleted in new
chr16_KI270853v1_alt	623623	631833	chr16_KI270853v1_alt:623623-631833	0	+	623623	623623	8553170	6	1721,54,54,98,114,357,	0,4387,4942,5997,7376,7853,
#Deleted in new
chr16_KI270853v1_alt	629219	631079	chr16_KI270853v1_alt:629219-631079	0	+	629219	629219	8553170	2	499,80,	0,1780,
#Deleted in new
chr16_KI270853v1_alt	631354	694570	chr16_KI270853v1_alt:631354-694570	3	-	633413	694473	789624	23	2319,105,97,93,122,119,172,106,89,64,51,126,102,49,85,79,69,190,147,81,66,74,118,	0,2781,3781,3956,4935,5355,6428,8279,9369,11629,15581,19366,20908,21162,22117,28570,29482,31743,33993,36470,39921,40500,63098,
#Deleted in new
chr16_KI270853v1_alt	631363	671933	chr16_KI270853v1_alt:631363-671933	1	-	633413	671904	789624	20	2310,105,97,93,122,119,172,106,89,64,51,126,102,49,85,79,69,190,66,79,	0,2772,3772,3947,4926,5346,6419,8270,9360,11620,15572,19357,20899,21153,22108,28561,29473,31734,39912,40491,
#Deleted in new
chr16_KI270853v1_alt	631999	694550	chr16_KI270853v1_alt:631999-694550	1	-	633413	694473	789624	22	1674,105,97,93,122,119,172,106,89,64,51,126,102,49,85,79,69,190,147,66,74,98,	0,2136,3136,3311,4290,4710,5783,7634,8724,10984,14936,18721,20263,20517,21472,27925,28837,31098,33348,39276,39855,62453,
#Deleted in new
chr16_KI270853v1_alt	631999	694568	chr16_KI270853v1_alt:631999-694568	0	-	631999	631999	8553170	22	1674,105,97,93,122,1245,106,89,64,51,126,102,49,85,79,69,190,147,81,66,74,116,	0,2136,3136,3311,4290,4710,7634,8724,10984,14936,18721,20263,20517,21472,27925,28837,31098,33348,35825,39276,39855,62453,
#Deleted in new
chr16_KI270853v1_alt	633008	695082	chr16_KI270853v1_alt:633008-695082	1	-	633413	694943	789624	23	665,105,97,93,122,119,172,106,89,64,51,126,102,49,85,79,69,190,147,81,66,74,214,	0,1127,2127,2302,3281,3701,4774,6625,7715,9975,13927,17712,19254,19508,20463,26916,27828,30089,32339,34816,38267,38846,61860,
#Deleted in new
chr16_KI270853v1_alt	633082	694544	chr16_KI270853v1_alt:633082-694544	1	-	633413	694473	789624	22	591,105,97,93,122,119,172,106,89,64,51,126,102,49,85,79,69,190,147,63,74,92,	0,1053,2053,2228,3207,3627,4700,6551,7641,9901,13853,17638,19180,19434,20389,26842,27754,30015,32265,38193,38772,61370,
#Deleted in new
chr16_KI270853v1_alt	633491	694584	chr16_KI270853v1_alt:633491-694584	0	-	636390	694473	789624	9	182,105,97,93,122,13,66,74,132,	0,644,1644,1819,2798,34401,37784,38363,60961,
#Deleted in new
chr16_KI270853v1_alt	633601	635597	chr16_KI270853v1_alt:633601-635597	0	-	633601	633601	8553170	4	72,105,97,287,	0,534,1534,1709,
#Deleted in new
chr16_KI270853v1_alt	637035	644466	chr16_KI270853v1_alt:637035-644466	0	-	637035	637035	8553170	4	919,106,89,1483,	0,2598,3688,5948,
#Deleted in new
chr16_KI270853v1_alt	639884	694593	chr16_KI270853v1_alt:639884-694593	1	-	640657	694473	789624	14	928,64,51,126,102,49,85,79,190,147,81,66,74,141,	0,3099,7051,10836,12378,12632,13587,20040,23213,25463,27940,31391,31970,54568,
#Deleted in new
chr16_KI270853v1_alt	646961	694473	chr16_KI270853v1_alt:646961-694473	1	-	646961	694473	789624	14	9,15,126,102,49,85,79,69,190,147,81,66,74,21,	0,10,3759,5301,5555,6510,12963,13875,16136,18386,20863,24314,24893,47491,
#Deleted in new
chr16_KI270853v1_alt	653294	653857	chr16_KI270853v1_alt:653294-653857	3	+	653294	653294	8553170	1	563,	0,
#Deleted in new
chr16_KI270853v1_alt	679515	681417	chr16_KI270853v1_alt:679515-681417	7	+	679515	679515	16724991	1	1902,	0,
#Deleted in new
chr16_KI270853v1_alt	717612	744304	chr16_KI270853v1_alt:717612-744304	0	-	717612	717612	8553170	20	505,36,61,108,145,100,129,86,53,117,127,211,144,171,196,253,157,171,145,77,	0,1864,2009,3085,6141,6449,10185,14474,16727,16848,18631,18848,19153,19383,21049,21369,21802,22703,23625,26615,
#Deleted in new
chr16_KI270853v1_alt	717616	748785	chr16_KI270853v1_alt:717616-748785	3	-	717616	717616	8553170	28	501,70,36,61,108,145,100,129,86,238,127,211,144,171,196,253,157,781,145,153,160,214,280,144,134,176,132,348,	0,1294,1860,2005,3081,6137,6445,10181,14470,16723,18627,18844,19149,19379,21045,21365,21798,22089,23621,26611,27154,27380,27687,28094,29332,29818,30184,30821,
#Deleted in new
chr16_KI270853v1_alt	717632	732294	chr16_KI270853v1_alt:717632-732294	3	-	717649	732294	789624	8	485,36,61,108,145,100,129,63,	0,1844,1989,3065,6121,6429,10165,14599,
#Deleted in new
chr16_KI270853v1_alt	719210	723850	chr16_KI270853v1_alt:719210-723850	0	-	719221	723850	789624	4	302,61,108,97,	0,411,1487,4543,
#Deleted in new
chr16_KI270853v1_alt	719651	731522	chr16_KI270853v1_alt:719651-731522	0	-	719651	731522	789624	6	31,108,145,100,129,141,	0,1046,4102,4410,8146,11730,
#Deleted in new
chr16_KI270853v1_alt	723811	732323	chr16_KI270853v1_alt:723811-732323	0	-	723811	723811	8553170	4	87,100,129,237,	0,250,3986,8275,
#Deleted in new
chr16_KI270853v1_alt	745434	752629	chr16_KI270853v1_alt:745434-752629	5	-	745434	745434	16724991	12	149,144,134,176,132,756,248,127,116,184,184,169,	0,276,1514,2000,2366,3396,4625,5228,5765,6069,6724,7026,
#Deleted in new
chr16_KI270853v1_alt	746235	760035	chr16_KI270853v1_alt:746235-760035	7	-	746235	746235	16724991	15	246,134,176,132,756,248,127,116,221,184,672,170,72,72,357,	0,713,1199,1565,2595,3824,4427,4964,5268,5923,6225,7109,7547,7740,13443,
#Deleted in new
chr16_KI270853v1_alt	749499	751251	chr16_KI270853v1_alt:749499-751251	4	-	749499	749499	16724991	4	87,248,127,52,	0,560,1163,1700,
#Deleted in new
chr16_KI270853v1_alt	756030	756130	chr16_KI270853v1_alt:756030-756130	3	+	756030	756030	8553170	1	100,	0,
#Deleted in new
chr16_KI270853v1_alt	814086	845777	chr16_KI270853v1_alt:814086-845777	0	+	814086	845777	789624	7	68,87,74,66,81,147,31,	0,150,23013,23600,27036,29447,31660,
#Deleted in new
chr16_KI270853v1_alt	814361	870274	chr16_KI270853v1_alt:814361-870274	3	+	814549	869911	789624	17	209,74,66,81,147,190,69,79,85,49,102,126,51,64,89,106,461,	0,22738,23325,26761,29172,31385,33767,34669,41111,42102,42303,43822,47686,51625,53861,54934,55452,
#Deleted in new
chr16_KI270853v1_alt	814370	843667	chr16_KI270853v1_alt:814370-843667	0	+	814549	843667	789624	4	200,74,66,134,	0,22729,23316,29163,
#Deleted in new
chr16_KI270853v1_alt	814429	869150	chr16_KI270853v1_alt:814429-869150	1	+	814549	868377	789624	14	141,74,66,81,147,190,79,85,49,102,126,51,64,928,	0,22670,23257,26693,29104,31317,34601,41043,42034,42235,43754,47618,51557,53793,
#Deleted in new
chr16_KI270853v1_alt	814501	870251	chr16_KI270853v1_alt:814501-870251	1	+	856685	869911	789624	16	69,74,66,112,147,190,60,76,49,102,126,51,64,89,106,438,	0,22598,23185,26621,29032,31245,33627,40980,41962,42163,43682,47546,51485,53721,54794,55312,
#Deleted in new
chr16_KI270853v1_alt	814549	862072	chr16_KI270853v1_alt:814549-862072	1	+	814549	862072	789624	14	21,74,66,81,147,190,69,79,85,49,102,126,15,9,	0,22550,23137,26573,28984,31197,33579,34481,40923,41914,42115,43634,47498,47514,
#Deleted in new
chr16_KI270853v1_alt	864567	869401	chr16_KI270853v1_alt:864567-869401	0	+	864567	864567	8553170	3	1483,89,106,	0,3655,4728,
#Deleted in new
chr16_KI270853v1_alt	871374	871474	chr16_KI270853v1_alt:871374-871474	3	+	871374	871374	8553170	1	100,	0,
#Deleted in new
chr16_KI270853v1_alt	890753	953160	chr16_KI270853v1_alt:890753-953160	3	-	891265	952989	789624	31	644,93,120,102,111,84,142,128,114,127,160,83,219,96,64,88,137,132,142,175,151,106,90,138,153,73,107,101,46,90,336,	0,1067,6942,9295,11675,13480,14472,16015,17323,19372,19644,20728,20896,23745,24390,27439,29397,30933,31362,32901,38431,38764,42060,42482,43504,47114,49402,51311,54680,57591,62071,
#Deleted in new
chr16_KI270853v1_alt	890754	953061	chr16_KI270853v1_alt:890754-953061	1	-	890799	952989	789624	32	184,128,93,120,102,111,84,142,128,114,127,160,83,219,96,64,88,137,132,142,175,151,106,90,138,153,73,107,101,46,90,237,	0,515,1066,6941,9294,11674,13479,14471,16014,17322,19371,19643,20727,20895,23744,24389,27438,29396,30932,31361,32900,38430,38763,42059,42481,43503,47113,49401,51310,54679,57590,62070,
#Deleted in new
chr16_KI270853v1_alt	890754	898857	chr16_KI270853v1_alt:890754-898857	0	-	890754	890754	8553170	3	643,93,1162,	0,1066,6941,
#Deleted in new
chr16_KI270853v1_alt	890765	953023	chr16_KI270853v1_alt:890765-953023	1	-	890799	942072	789624	31	173,128,93,120,102,111,84,142,128,114,127,160,83,219,96,64,88,137,132,142,175,151,106,90,138,153,73,101,46,90,199,	0,504,1055,6930,9283,11663,13468,14460,16003,17311,19360,19632,20716,20884,23733,24378,27427,29385,30921,31350,32889,38419,38752,42048,42470,43492,47102,51299,54668,57579,62059,
#Deleted in new
chr16_KI270853v1_alt	891216	900136	chr16_KI270853v1_alt:891216-900136	0	-	891265	900136	789624	4	181,93,120,88,	0,604,6479,8832,
#Deleted in new
chr16_KI270853v1_alt	923781	933786	chr16_KI270853v1_alt:923781-933786	0	-	923781	923781	8553170	6	48,151,106,90,138,27,	0,5403,5736,9032,9454,9978,
#Deleted in new
chr16_KI270853v1_alt	924092	924462	chr16_KI270853v1_alt:924092-924462	7	+	924092	924092	16724991	1	370,	0,
#Deleted in new
chr16_KI270853v1_alt	929288	933584	chr16_KI270853v1_alt:929288-933584	0	-	929288	929288	8553170	4	47,106,90,349,	0,229,3525,3947,
#Deleted in new
chr16_KI270853v1_alt	933235	938318	chr16_KI270853v1_alt:933235-938318	0	-	933235	933235	8553170	4	138,153,73,184,	0,1022,4632,4899,
#Deleted in new
chr16_KI270853v1_alt	962182	964459	chr16_KI270853v1_alt:962182-964459	5	+	962182	962182	16724991	2	69,643,	0,1634,
#Deleted in new
chr16_KI270853v1_alt	962215	966093	chr16_KI270853v1_alt:962215-966093	7	+	962215	962215	16724991	5	36,183,116,126,129,	0,1601,3043,3484,3749,
#Deleted in new
chr16_KI270853v1_alt	1021569	1036314	chr16_KI270853v1_alt:1021569-1036314	3	-	1021604	1036245	789624	8	446,36,61,108,145,100,129,132,	0,1805,1950,3029,6087,6395,10093,14613,
#Deleted in new
chr16_KI270853v1_alt	1053716	1071247	chr16_KI270853v1_alt:1053716-1071247	3	+	1053860	1066013	789624	3	454,30,5338,	0,12084,12193,
#Deleted in new
chr16_KI270853v1_alt	1053716	1173341	chr16_KI270853v1_alt:1053716-1173341	2	+	1053860	1173341	789624	2	454,44,	0,119581,
#Deleted in new
chr16_KI270853v1_alt	1053741	1066416	chr16_KI270853v1_alt:1053741-1066416	1	+	1053860	1066089	789624	4	429,71,30,507,	0,5010,12059,12168,
#Deleted in new
chr16_KI270853v1_alt	1053912	1173326	chr16_KI270853v1_alt:1053912-1173326	0	+	1053912	1057430	789624	4	258,118,71,29,	0,3483,4839,119385,
#Deleted in new
chr16_KI270853v1_alt	1053912	1173326	chr16_KI270853v1_alt:1053912-1173326	1	+	1053912	1092475	789624	3	258,365,29,	0,38459,119385,
#Deleted in new
chr16_KI270853v1_alt	1054046	1066095	chr16_KI270853v1_alt:1054046-1066095	0	+	1054046	1057430	789624	5	124,118,71,30,186,	0,3349,4705,11754,11863,
#Deleted in new
chr16_KI270853v1_alt	1092271	1246252	chr16_KI270853v1_alt:1092271-1246252	3	+	1092630	1244821	789624	6	465,124,74,115,83,1544,	0,81026,133703,146937,148876,152437,
#Deleted in new
chr16_KI270853v1_alt	1092451	1245965	chr16_KI270853v1_alt:1092451-1245965	1	+	1092630	1244745	789624	5	285,124,74,115,1257,	0,80846,133523,146757,152257,
#Deleted in new
chr16_KI270853v1_alt	1092544	1241230	chr16_KI270853v1_alt:1092544-1241230	0	+	1092630	1191015	789624	6	192,124,149,74,115,83,	0,80753,98434,133430,146664,148603,
#Deleted in new
chr16_KI270853v1_alt	1092564	1239384	chr16_KI270853v1_alt:1092564-1239384	0	+	1092564	1092564	8553170	4	172,124,74,176,	0,80733,133410,146644,
#Deleted in new
chr16_KI270853v1_alt	1160257	1246067	chr16_KI270853v1_alt:1160257-1246067	1	+	1160313	1244821	789624	6	111,124,74,115,83,1359,	0,13040,65717,78951,80890,84451,
#Deleted in new
chr16_KI270853v1_alt	1173297	1245957	chr16_KI270853v1_alt:1173297-1245957	0	+	1173297	1245619	789624	5	124,74,115,83,469,	0,52677,65911,67850,72191,
#Deleted in new
chr16_KI270853v1_alt	1173335	1242174	chr16_KI270853v1_alt:1173335-1242174	1	+	1173335	1242045	789624	5	86,74,115,83,176,	0,52639,65873,67812,68663,
#Deleted in new
chr16_KI270853v1_alt	1191034	1194940	chr16_KI270853v1_alt:1191034-1194940	0	+	1191034	1191034	8553170	2	93,369,	0,3537,
#Deleted in new
chr16_KI270853v1_alt	1225974	1283041	chr16_KI270853v1_alt:1225974-1283041	0	+	1225974	1249096	789624	5	74,115,83,86,139,	0,13234,15173,23048,56928,
#Deleted in new
chr16_KI270853v1_alt	1235125	1245350	chr16_KI270853v1_alt:1235125-1245350	0	+	1235125	1235125	8553170	4	95,115,83,642,	0,4083,6022,9583,
#Deleted in new
chr16_KI270853v1_alt	1252376	1301177	chr16_KI270853v1_alt:1252376-1301177	3	-	1254683	1297244	0	27	2552,171,126,61,213,231,228,203,134,143,221,176,120,237,81,179,190,159,158,429,173,118,227,175,687,202,149,	0,4468,6042,6255,7605,9805,13927,15159,16611,17228,18193,21466,22688,22935,26087,27369,28570,30405,30652,31008,35968,37017,39251,40391,41290,44724,48652,
#Deleted in new
chr16_KI270853v1_alt	1252377	1297302	chr16_KI270853v1_alt:1252377-1297302	1	-	1254683	1297244	789624	25	2551,171,126,61,213,231,228,203,134,143,221,176,120,237,81,179,124,159,158,173,118,227,175,687,202,	0,4467,6041,6254,7604,9804,13926,15158,16610,17227,18192,21465,22687,22934,26086,27368,28569,30404,30651,35967,37016,39250,40390,41289,44723,
#Deleted in new
chr16_KI270853v1_alt	1252378	1259854	chr16_KI270853v1_alt:1252378-1259854	0	-	1252378	1252378	8553170	3	2550,171,1436,	0,4466,6040,
#Deleted in new
chr16_KI270853v1_alt	1254161	1301119	chr16_KI270853v1_alt:1254161-1301119	1	-	1254683	1297244	0	27	767,171,126,61,213,231,228,203,134,143,221,176,120,237,81,179,190,159,158,429,173,118,218,175,687,202,91,	0,2683,4257,4470,5820,8020,12142,13374,14826,15443,16408,19681,20903,21150,24302,25584,26785,28620,28867,29223,34183,35232,37466,38606,39505,42939,46867,
#Deleted in new
chr16_KI270853v1_alt	1254161	1301119	chr16_KI270853v1_alt:1254161-1301119	1	-	1254683	1297244	0	27	767,171,126,61,213,231,228,203,134,143,221,176,120,237,81,179,193,159,158,426,173,118,227,175,687,202,91,	0,2683,4257,4470,5820,8020,12142,13374,14826,15443,16408,19681,20903,21150,24302,25584,26785,28620,28867,29223,34183,35232,37466,38606,39505,42939,46867,
#Deleted in new
chr16_KI270853v1_alt	1254625	1258451	chr16_KI270853v1_alt:1254625-1258451	0	-	1257082	1258451	789624	3	303,264,33,	0,2219,3793,
#Deleted in new
chr16_KI270853v1_alt	1254683	1297244	chr16_KI270853v1_alt:1254683-1297244	0	-	1270753	1297244	789624	25	245,171,126,61,213,231,228,203,134,143,221,120,237,81,179,190,159,158,429,173,118,227,175,687,144,	0,2161,3735,3948,5298,7498,11620,12852,14304,14921,15886,20381,20628,23780,25062,26263,28098,28345,28701,33661,34710,36944,38084,38983,42417,
#Deleted in new
chr16_KI270853v1_alt	1254757	1257162	chr16_KI270853v1_alt:1254757-1257162	0	-	1254757	1254757	8553170	2	171,318,	0,2087,
#Deleted in new
chr16_KI270853v1_alt	1256912	1258970	chr16_KI270853v1_alt:1256912-1258970	0	-	1256912	1256912	8553170	3	103,126,339,	0,1506,1719,
#Deleted in new
chr16_KI270853v1_alt	1260118	1264128	chr16_KI270853v1_alt:1260118-1264128	0	-	1260118	1260118	8553170	3	76,231,267,	0,2063,3743,
#Deleted in new
chr16_KI270853v1_alt	1266486	1268576	chr16_KI270853v1_alt:1266486-1268576	3	+	1266486	1266486	8553170	2	266,264,	0,1826,
#Deleted in new
chr16_KI270853v1_alt	1270718	1275378	chr16_KI270853v1_alt:1270718-1275378	0	-	1270718	1270718	8553170	3	72,176,314,	0,3124,4346,
#Deleted in new
chr16_KI270853v1_alt	1274797	1281163	chr16_KI270853v1_alt:1274797-1281163	0	-	1274797	1274797	8553170	5	387,237,81,179,217,	0,514,3666,4948,6149,
#Deleted in new
chr16_KI270853v1_alt	1279505	1281095	chr16_KI270853v1_alt:1279505-1281095	0	-	1279505	1279505	8553170	2	419,149,	0,1441,
#Deleted in new
chr16_KI270853v1_alt	1288246	1301153	chr16_KI270853v1_alt:1288246-1301153	0	-	1288246	1288246	8553170	6	271,118,227,1586,202,125,	0,1147,3381,4521,8854,12782,
#Deleted in new
chr16_KI270853v1_alt	1294004	1300499	chr16_KI270853v1_alt:1294004-1300499	0	-	1294004	1297244	789624	3	349,202,30,	0,3096,6465,
#Deleted in new
chr16_KI270853v1_alt	1301277	1384364	chr16_KI270853v1_alt:1301277-1384364	3	+	1322789	1382262	789624	10	661,122,126,154,149,137,180,92,152,2163,	0,6081,21469,24019,34534,44108,47876,50898,53442,80924,
#Deleted in new
chr16_KI270853v1_alt	1308237	1384364	chr16_KI270853v1_alt:1308237-1384364	1	+	1322789	1382262	789624	9	68,126,154,149,137,180,92,152,2163,	0,14509,17059,27574,37148,40916,43938,46482,73964,
#Deleted in new
chr16_KI270853v1_alt	1308257	1335955	chr16_KI270853v1_alt:1308257-1335955	0	+	1322789	1335955	789624	5	48,116,126,154,144,	0,1222,14489,17039,27554,
#Deleted in new
chr16_KI270853v1_alt	1308257	1349334	chr16_KI270853v1_alt:1308257-1349334	0	+	1322789	1335953	789624	7	48,120,126,154,149,137,181,	0,1684,14489,17039,27554,37128,40896,
#Deleted in new
chr16_KI270853v1_alt	1308267	1349229	chr16_KI270853v1_alt:1308267-1349229	0	+	1322789	1335822	789624	7	38,126,154,82,149,137,76,	0,14479,17029,22433,27544,37118,40886,
#Deleted in new
chr16_KI270853v1_alt	1330673	1345479	chr16_KI270853v1_alt:1330673-1345479	0	+	1330673	1330673	8553170	3	109,149,94,	0,5138,14712,
#Deleted in new
chr16_KI270853v1_alt	1335935	1354777	chr16_KI270853v1_alt:1335935-1354777	0	+	1335935	1354777	789624	6	25,137,180,92,83,58,	0,9450,13218,16240,17983,18784,
#Deleted in new
chr16_KI270853v1_alt	1341300	1342581	chr16_KI270853v1_alt:1341300-1342581	3	+	1341300	1341300	8553170	2	99,404,	0,877,
#Deleted in new
chr16_KI270853v1_alt	1345437	1357941	chr16_KI270853v1_alt:1345437-1357941	0	+	1345437	1357620	789624	5	85,180,92,152,334,	0,3716,6738,9282,12170,
#Deleted in new
chr16_KI270853v1_alt	1349172	1382233	chr16_KI270853v1_alt:1349172-1382233	0	+	1349172	1382233	789624	4	161,92,126,32,	0,3003,8567,33029,
#Deleted in new
chr16_KI270853v1_alt	1349209	1358502	chr16_KI270853v1_alt:1349209-1358502	0	+	1349209	1357833	789624	4	124,92,152,763,	0,2966,5510,8530,
#Deleted in new
chr16_KI270853v1_alt	1349251	1382233	chr16_KI270853v1_alt:1349251-1382233	0	+	1349251	1357833	789624	5	82,92,152,126,32,	0,2924,5468,8488,32950,
#Deleted in new
chr16_KI270853v1_alt	1359247	1360129	chr16_KI270853v1_alt:1359247-1360129	3	+	1359247	1359247	8553170	1	882,	0,
#Deleted in new
chr16_KI270853v1_alt	1361182	1515004	chr16_KI270853v1_alt:1361182-1515004	1	-	1366821	1496241	789624	43	952,39,173,109,209,124,89,129,162,213,213,249,153,105,207,145,213,172,124,138,207,132,109,161,70,122,194,115,174,174,153,119,96,144,99,64,93,21,103,28,157,362,71,	0,5631,11737,11992,13968,15143,16048,16413,16979,17667,18250,20989,21475,21716,23676,29392,32194,34277,35393,36879,38291,38588,41957,44398,44702,44875,46966,50222,53169,54655,56404,57368,60624,68396,72880,75582,79187,81500,83432,95458,120057,134714,153751,
#Deleted in new
chr16_KI270853v1_alt	1361182	1515004	chr16_KI270853v1_alt:1361182-1515004	3	-	1362001	1496241	789624	42	952,173,109,209,124,89,129,162,213,213,249,153,105,207,145,213,172,124,138,207,132,109,161,70,122,194,115,174,174,153,119,96,144,99,64,93,21,103,28,157,362,71,	0,11737,11992,13968,15143,16048,16413,16979,17667,18250,20989,21475,21716,23676,29392,32194,34277,35393,36879,38291,38588,41957,44398,44702,44875,46966,50222,53169,54655,56404,57368,60624,68396,72880,75582,79187,81500,83432,95458,120057,134714,153751,
#Deleted in new
chr16_KI270853v1_alt	1361751	1369281	chr16_KI270853v1_alt:1361751-1369281	0	-	1361751	1361751	8553170	2	383,158,	0,7372,
#Deleted in new
chr16_KI270853v1_alt	1361797	1515026	chr16_KI270853v1_alt:1361797-1515026	1	-	1366821	1496241	789624	42	337,39,173,109,209,124,89,129,162,213,213,249,153,105,207,145,213,172,124,138,207,132,109,161,70,122,194,115,174,174,153,119,96,144,99,64,93,103,28,157,362,93,	0,5016,11122,11377,13353,14528,15433,15798,16364,17052,17635,20374,20860,21101,23061,28777,31579,33662,34778,36264,37676,37973,41342,43783,44087,44260,46351,49607,52554,54040,55789,56753,60009,67781,72265,74967,78572,82817,94843,119442,134099,153136,
#Deleted in new
chr16_KI270853v1_alt	1362001	1515026	chr16_KI270853v1_alt:1362001-1515026	1	-	1362001	1496241	789624	41	133,173,109,209,124,89,129,162,213,213,249,153,105,207,145,213,172,124,138,207,132,109,161,70,122,194,115,174,174,153,119,96,144,99,64,93,103,28,157,362,93,	0,10918,11173,13149,14324,15229,15594,16160,16848,17431,20170,20656,20897,22857,28573,31375,33458,34574,36060,37472,37769,41138,43579,43883,44056,46147,49403,52350,53836,55585,56549,59805,67577,72061,74763,78368,82613,94639,119238,133895,152932,
#Deleted in new
chr16_KI270853v1_alt	1370900	1382339	chr16_KI270853v1_alt:1370900-1382339	0	-	1370900	1370900	8553170	7	2192,109,2169,129,162,796,168,	0,2274,4250,6695,7261,7949,11271,
#Deleted in new
chr16_KI270853v1_alt	1370906	1383149	chr16_KI270853v1_alt:1370906-1383149	0	-	1370906	1370906	8553170	12	2186,109,209,124,89,129,162,213,213,249,153,251,	0,2268,4244,5419,6324,6689,7255,7943,8526,11265,11751,11992,
#Deleted in new
chr16_KI270853v1_alt	1379503	1382302	chr16_KI270853v1_alt:1379503-1382302	0	+	1379503	1379503	8553170	2	184,101,	0,2698,
#Deleted in new
chr16_KI270853v1_alt	1384684	1391004	chr16_KI270853v1_alt:1384684-1391004	3	+	1384684	1384684	8553170	2	327,509,	0,5811,
#Deleted in new
chr16_KI270853v1_alt	1399161	1399802	chr16_KI270853v1_alt:1399161-1399802	3	+	1399161	1399161	8553170	2	514,36,	0,605,
#Deleted in new
chr16_KI270853v1_alt	1399563	1400202	chr16_KI270853v1_alt:1399563-1400202	0	-	1399563	1399563	8553170	2	117,432,	0,207,
#Deleted in new
chr16_KI270853v1_alt	1407178	1441517	chr16_KI270853v1_alt:1407178-1441517	0	-	1407178	1407178	8553170	11	1164,115,174,174,153,119,96,144,99,64,1148,	0,4226,7173,8659,10408,11372,14628,22400,26884,29586,33191,
#Deleted in new
chr16_KI270853v1_alt	1433826	1437408	chr16_KI270853v1_alt:1433826-1437408	0	-	1433826	1433826	8553170	2	335,644,	0,2938,
#Deleted in new
chr16_KI270853v1_alt	1442999	1515021	chr16_KI270853v1_alt:1442999-1515021	0	-	1442999	1442999	8553170	5	1718,28,157,362,88,	0,13641,38240,52897,71934,
#Deleted in new
chr16_KI270853v1_alt	1523718	1546616	chr16_KI270853v1_alt:1523718-1546616	3	-	1525438	1546586	789624	5	1797,137,85,198,58,	0,7768,14080,18290,22840,
#Deleted in new
chr16_KI270853v1_alt	1523719	1546603	chr16_KI270853v1_alt:1523719-1546603	1	-	1525438	1546586	789624	3	1796,198,45,	0,18289,22839,
#Deleted in new
chr16_KI270853v1_alt	1525067	1546626	chr16_KI270853v1_alt:1525067-1546626	0	-	1531600	1546586	789624	4	448,137,198,68,	0,6419,16941,21491,
#Deleted in new
chr16_KI270853v1_alt	1525177	1546600	chr16_KI270853v1_alt:1525177-1546600	1	-	1525511	1546586	789624	5	338,85,72,198,42,	0,12621,15772,16831,21381,
#Deleted in new
chr16_KI270853v1_alt	1525218	1546604	chr16_KI270853v1_alt:1525218-1546604	1	-	1525438	1546586	789624	4	297,137,85,46,	0,6268,12580,21340,
#Deleted in new
chr16_KI270853v1_alt	1525305	1546624	chr16_KI270853v1_alt:1525305-1546624	0	-	1537834	1546586	789624	6	210,137,85,100,198,66,	0,6181,12493,15644,16703,21253,
#Deleted in new
chr16_KI270853v1_alt	1525336	1546626	chr16_KI270853v1_alt:1525336-1546626	1	-	1525511	1546586	789624	4	179,85,198,68,	0,12462,16672,21222,
#Deleted in new
chr16_KI270853v1_alt	1525418	1546615	chr16_KI270853v1_alt:1525418-1546615	1	-	1525438	1546586	789624	6	97,137,85,72,198,57,	0,6068,12380,15531,16590,21140,
#Deleted in new
chr16_KI270853v1_alt	1531480	1546594	chr16_KI270853v1_alt:1531480-1546594	0	-	1531480	1546586	789624	4	143,85,117,36,	0,6318,10528,15078,
#Deleted in new
chr16_KI270853v1_alt	1535158	1535262	chr16_KI270853v1_alt:1535158-1535262	3	-	1535158	1535158	8553170	1	104,	0,
#Deleted in new
chr16_KI270853v1_alt	1543029	1544159	chr16_KI270853v1_alt:1543029-1544159	3	+	1543029	1543029	8553170	2	46,490,	0,640,
#Deleted in new
chr16_KI270853v1_alt	1589659	1590257	chr16_KI270853v1_alt:1589659-1590257	7	-	1589659	1589659	16724991	1	598,	0,
#Deleted in new
chr16_KI270853v1_alt	1607546	1800966	chr16_KI270853v1_alt:1607546-1800966	3	+	1702515	1799172	789624	32	235,177,126,138,126,62,132,231,178,162,93,204,147,88,76,127,177,168,184,30,91,136,208,311,200,127,102,147,159,167,195,1903,	0,58143,60105,64820,66826,83455,86824,94800,96186,98492,103075,106434,118501,121985,126631,129657,133676,137133,140716,149184,152937,157051,161692,165084,172293,175121,176150,182128,184694,186818,188703,191517,
#Deleted in new
chr16_KI270853v1_alt	1607593	1800954	chr16_KI270853v1_alt:1607593-1800954	1	+	1607733	1799172	0	31	188,177,126,138,126,62,132,231,178,162,93,204,147,88,76,127,177,168,184,91,136,208,311,200,127,102,147,159,167,195,1891,	0,58096,60058,64773,66779,83408,86777,94753,96139,98445,103028,106387,118454,121938,126584,129610,133629,137086,140669,152890,157004,161645,165037,172246,175074,176103,182081,184647,186771,188656,191470,
#Deleted in new
chr16_KI270853v1_alt	1667731	1799416	chr16_KI270853v1_alt:1667731-1799416	0	+	1667731	1799172	789624	30	46,138,126,62,132,231,178,162,93,204,147,88,76,127,177,168,184,30,91,136,208,311,200,127,102,147,159,167,195,353,	0,4635,6641,23270,26639,34615,36001,38307,42890,46249,58316,61800,66446,69472,73491,76948,80531,88999,92752,96866,101507,104899,112108,114936,115965,121943,124509,126633,128518,131332,
#Deleted in new
chr16_KI270853v1_alt	1672415	1714450	chr16_KI270853v1_alt:1672415-1714450	0	+	1672415	1672415	8553170	9	89,126,62,132,231,178,162,93,470,	0,1957,18586,21955,29931,31317,33623,38206,41565,
#Deleted in new
chr16_KI270853v1_alt	1734025	1769325	chr16_KI270853v1_alt:1734025-1769325	0	+	1734025	1734025	8553170	8	228,127,177,168,184,91,136,87,	0,3178,7197,10654,14237,26458,30572,35213,
#Deleted in new
chr16_KI270853v1_alt	1752049	1753068	chr16_KI270853v1_alt:1752049-1753068	7	-	1752049	1752049	16724991	2	325,88,	0,931,
#Deleted in new
chr16_KI270853v1_alt	1755849	1764728	chr16_KI270853v1_alt:1755849-1764728	0	+	1755849	1755849	8553170	4	290,30,91,131,	0,881,4634,8748,
#Deleted in new
chr16_KI270853v1_alt	1764384	1779968	chr16_KI270853v1_alt:1764384-1779968	0	+	1764384	1764384	8553170	4	349,208,311,129,	0,4854,8246,15455,
#Deleted in new
chr16_KI270853v1_alt	1806847	1881459	chr16_KI270853v1_alt:1806847-1881459	1	-	1808058	1881429	789624	31	1320,195,167,159,147,102,127,200,311,208,121,76,175,168,177,127,76,88,144,204,93,162,178,204,132,62,126,129,126,183,66,	0,1656,5708,5953,8744,10562,12520,14075,16705,20904,24447,27073,28614,29961,33569,33961,36115,38277,39986,41317,43977,49169,53151,54560,59878,63335,65473,70701,70969,72796,74546,
#Deleted in new
chr16_KI270853v1_alt	1807519	1813704	chr16_KI270853v1_alt:1807519-1813704	0	-	1807519	1807519	8553170	4	648,195,167,904,	0,984,5036,5281,
#Deleted in new
chr16_KI270853v1_alt	1807622	1823873	chr16_KI270853v1_alt:1807622-1823873	3	-	1808058	1823873	789624	9	545,195,167,159,147,102,127,47,273,	0,881,4933,5178,7969,9787,11745,15930,15978,
#Deleted in new
chr16_KI270853v1_alt	1808058	1881429	chr16_KI270853v1_alt:1808058-1881429	0	-	1827955	1881429	789624	29	109,195,167,159,147,102,127,311,208,121,76,168,177,127,76,88,144,204,93,162,178,204,132,62,126,129,126,183,36,	0,445,4497,4742,7533,9351,11309,15494,19693,23236,25862,28750,32358,32750,34904,37066,38775,40106,42766,47958,51940,53349,58667,62124,64262,69490,69758,71585,73335,
#Deleted in new
chr16_KI270853v1_alt	1831092	1835531	chr16_KI270853v1_alt:1831092-1835531	0	-	1831092	1831092	8553170	3	323,76,77,	0,2828,4362,
#Deleted in new
chr16_KI270853v1_alt	1839709	1881489	chr16_KI270853v1_alt:1839709-1881489	0	-	1839709	1839709	8553170	16	221,76,88,144,204,93,162,178,204,132,62,126,129,126,219,96,	0,3253,5415,7124,8455,11115,16307,20289,21698,27016,30473,32611,37839,38107,39898,41684,
#Deleted in new
chr16_KI270853v1_alt	1859997	1881517	chr16_KI270853v1_alt:1859997-1881517	0	-	1878353	1881429	789624	10	179,204,132,62,126,129,126,116,183,124,	0,1410,6728,10185,12323,17551,17819,18270,19646,21396,
#Deleted in new
chr16_KI270853v1_alt	1879181	1881462	chr16_KI270853v1_alt:1879181-1881462	1	-	1879562	1881429	789624	2	645,69,	0,2212,
#Deleted in new
chr16_KI270853v1_alt	1881021	1882256	chr16_KI270853v1_alt:1881021-1882256	3	+	1881021	1881021	8553170	2	78,464,	0,771,
#Deleted in new
chr16_KI270853v1_alt	1890489	1952819	chr16_KI270853v1_alt:1890489-1952819	3	+	1890661	1952304	789624	31	337,90,46,101,107,73,153,138,90,106,151,175,142,132,137,88,64,96,219,83,160,127,114,128,142,84,111,102,120,93,647,	0,4409,7359,10669,12576,14903,18436,19471,19941,23228,23516,29010,30582,31021,32551,34557,37634,38246,41202,41506,42529,42834,44888,46180,47707,48757,50534,52923,55261,61167,61683,
#Deleted in new
chr16_KI270853v1_alt	1890524	1901225	chr16_KI270853v1_alt:1890524-1901225	0	+	1890661	1893861	789624	5	302,178,90,46,67,	0,3316,4374,7324,10634,
#Deleted in new
chr16_KI270853v1_alt	1890595	1952811	chr16_KI270853v1_alt:1890595-1952811	1	+	1890661	1952770	789624	32	231,90,46,101,107,73,153,138,90,106,151,175,142,132,137,88,64,96,219,83,160,127,114,128,142,84,111,102,120,93,128,180,	0,4303,7253,10563,12470,14797,18330,19365,19835,23122,23410,28904,30476,30915,32445,34451,37528,38140,41096,41400,42423,42728,44782,46074,47601,48651,50428,52817,55155,61061,61577,62036,
#Deleted in new
chr16_KI270853v1_alt	1890627	1952804	chr16_KI270853v1_alt:1890627-1952804	0	+	1890661	1905407	789624	31	199,90,46,101,73,153,138,90,106,151,175,142,132,137,88,64,96,219,83,160,127,114,128,142,84,111,102,120,93,128,173,	0,4271,7221,10531,14765,18298,19333,19803,23090,23378,28872,30444,30883,32413,34419,37496,38108,41064,41368,42391,42696,44750,46042,47569,48619,50396,52785,55123,61029,61545,62004,
#Deleted in new
chr16_KI270853v1_alt	1905014	1910098	chr16_KI270853v1_alt:1905014-1910098	0	+	1905014	1905014	8553170	4	184,73,153,138,	0,378,3911,4946,
#Deleted in new
chr16_KI270853v1_alt	1909547	1919547	chr16_KI270853v1_alt:1909547-1919547	0	+	1909547	1909547	8553170	6	27,138,90,106,151,48,	0,413,883,4170,4458,9952,
#Deleted in new
chr16_KI270853v1_alt	1909749	1914052	chr16_KI270853v1_alt:1909749-1914052	0	+	1909749	1909749	8553170	4	349,90,106,47,	0,681,3968,4256,
#Deleted in new
chr16_KI270853v1_alt	1918863	1919233	chr16_KI270853v1_alt:1918863-1919233	7	-	1918863	1918863	16724991	1	370,	0,
#Deleted in new
chr16_KI270853v1_alt	1923052	1925315	chr16_KI270853v1_alt:1923052-1925315	0	+	1923052	1923052	8553170	2	125,269,	0,1994,
#Deleted in new
chr16_KI270853v1_alt	1923053	1931776	chr16_KI270853v1_alt:1923053-1931776	0	+	1923053	1928138	789624	6	124,59,88,64,96,85,	0,1546,1993,5070,5682,8638,
#Deleted in new
chr16_KI270853v1_alt	1923130	1931855	chr16_KI270853v1_alt:1923130-1931855	0	+	1923130	1928138	789624	5	139,88,64,96,164,	0,1916,4993,5605,8561,
#Deleted in new
chr16_KI270853v1_alt	1931843	1936209	chr16_KI270853v1_alt:1931843-1936209	0	+	1931843	1931843	8553170	5	67,83,160,127,832,	0,152,1175,1480,3534,
#Deleted in new
chr16_KI270853v1_alt	1936493	1945828	chr16_KI270853v1_alt:1936493-1945828	0	+	1936493	1936493	8553170	6	304,142,84,111,102,78,	0,1703,2753,4530,6919,9257,
#Deleted in new
chr16_KI270853v1_alt	1938217	1946657	chr16_KI270853v1_alt:1938217-1946657	0	+	1938217	1938217	8553170	6	121,84,111,102,120,85,	0,1029,2806,5195,7533,8355,
#Deleted in new
chr16_KI270853v1_alt	1944708	1952815	chr16_KI270853v1_alt:1944708-1952815	0	+	1944708	1944708	8553170	3	1162,93,643,	0,6948,7464,
#Deleted in new
chr16_KI270853v1_alt	1945726	1950476	chr16_KI270853v1_alt:1945726-1950476	0	+	1945726	1945726	8553170	2	179,368,	0,4382,
#Deleted in new
chr16_KI270853v1_alt	1948139	1950247	chr16_KI270853v1_alt:1948139-1950247	3	-	1948139	1948139	8553170	2	453,114,	0,1994,
#Deleted in new
chr16_KI270853v1_alt	1951216	1952282	chr16_KI270853v1_alt:1951216-1952282	0	+	1951216	1951216	8553170	2	533,110,	0,956,
#Deleted in new
chr16_KI270853v1_alt	1951687	1952308	chr16_KI270853v1_alt:1951687-1952308	0	+	1951687	1952054	789624	3	62,122,136,	0,277,485,
#Deleted in new
chr16_KI270853v1_alt	1968102	2038554	chr16_KI270853v1_alt:1968102-2038554	7	+	1968102	1968102	16724991	33	431,72,72,170,672,184,221,116,127,248,756,132,176,134,3617,150,144,280,214,160,153,145,621,157,253,196,171,144,211,127,117,50,87,	0,6061,6254,6594,6976,7766,8384,8793,9319,9801,10522,53422,53733,54242,54838,58674,59758,60029,60402,60682,61232,62979,63982,64894,65231,65608,67295,67552,67790,68091,69884,70091,70365,
#Deleted in new
chr16_KI270853v1_alt	1972084	1972184	chr16_KI270853v1_alt:1972084-1972184	3	-	1972084	1972084	8553170	1	100,	0,
#Deleted in new
chr16_KI270853v1_alt	1975581	1982776	chr16_KI270853v1_alt:1975581-1982776	4	+	1975581	1975581	16724991	11	169,184,184,116,127,248,756,132,176,134,149,	0,287,942,1314,1840,2322,3043,4697,5019,5547,7046,
#Deleted in new
chr16_KI270853v1_alt	1991057	2009775	chr16_KI270853v1_alt:1991057-2009775	1	+	1995110	2009749	789624	10	104,238,132,129,100,145,108,61,36,494,	0,1770,3984,8428,12176,12439,15535,16659,16829,18224,
#Deleted in new
chr16_KI270853v1_alt	1992827	2009784	chr16_KI270853v1_alt:1992827-2009784	1	+	1995110	2008475	8553170	10	238,132,129,100,145,108,61,36,70,503,	0,2214,6658,10406,10669,13765,14889,15059,15591,16454,
#Deleted in new
chr16_KI270853v1_alt	1992828	2006645	chr16_KI270853v1_alt:1992828-2006645	0	+	1992828	1992828	8553170	5	237,129,100,145,53,	0,6657,10405,10668,13764,
#Deleted in new
chr16_KI270853v1_alt	1992917	1999681	chr16_KI270853v1_alt:1992917-1999681	0	+	1992917	1992917	8553170	3	148,277,196,	0,2124,6568,
#Deleted in new
chr16_KI270853v1_alt	1995110	2008475	chr16_KI270853v1_alt:1995110-2008475	3	+	1995110	2008475	8553170	8	63,129,100,145,108,61,36,57,	0,4375,8123,8386,11482,12606,12776,13308,
#Deleted in new
chr16_KI270853v1_alt	1999551	2006823	chr16_KI270853v1_alt:1999551-2006823	0	+	1999551	1999551	8553170	4	63,100,145,231,	0,3682,3945,7041,
#Deleted in new
chr16_KI270853v1_alt	2003283	2008506	chr16_KI270853v1_alt:2003283-2008506	0	+	2003283	2008177	789624	5	50,145,108,61,620,	0,213,3309,4433,4603,
#Deleted in new
chr16_KI270853v1_alt	2009287	2009749	chr16_KI270853v1_alt:2009287-2009749	1	+	2009287	2009749	789624	1	462,	0,
#Deleted in new
chr16_KI270853v1_alt	2040291	2054986	chr16_KI270853v1_alt:2040291-2054986	3	+	2040291	2054965	789624	8	63,129,100,145,108,61,36,489,	0,4420,8150,8413,11517,12641,12811,14206,
#Deleted in new
chr16_KI270853v1_alt	2202276	2202907	chr16_KI270853v1_alt:2202276-2202907	7	-	2202276	2202276	16724991	1	631,	0,
#Deleted in new
chr16_KI270853v1_alt	2319165	2325077	chr16_KI270853v1_alt:2319165-2325077	3	+	2319165	2319165	8553170	3	112,93,469,	0,1281,5443,
#Deleted in new
chr16_KI270853v1_alt	2421840	2423401	chr16_KI270853v1_alt:2421840-2423401	3	+	2421840	2421840	8553170	1	1561,	0,
#Deleted in new
chr16_KI270853v1_alt	2613462	2614429	chr16_KI270853v1_alt:2613462-2614429	7	-	2613462	2613462	16724991	1	967,	0,
#Deleted in new
chr16_KI270854v1_alt	971	11633	chr16_KI270854v1_alt:971-11633	3	+	1109	10724	0	9	218,69,52,136,125,94,105,218,598,	0,3130,4520,5599,8417,8865,9146,9535,10064,
#Deleted in new
chr16_KI270854v1_alt	1003	5875	chr16_KI270854v1_alt:1003-5875	1	+	1109	5875	789624	4	186,69,52,45,	0,3098,4488,4827,
#Deleted in new
chr16_KI270854v1_alt	1027	11122	chr16_KI270854v1_alt:1027-11122	1	+	1109	10724	789624	9	162,69,16,136,125,94,105,218,87,	0,3074,4464,5543,8361,8809,9090,9479,10008,
#Deleted in new
chr16_KI270854v1_alt	1028	9452	chr16_KI270854v1_alt:1028-9452	0	+	1109	9452	789624	5	161,69,79,136,64,	0,3073,3263,5542,8360,
#Deleted in new
chr16_KI270854v1_alt	1030	6215	chr16_KI270854v1_alt:1030-6215	0	+	1109	5929	789624	5	159,69,52,98,180,	0,3071,4461,4851,5005,
#Deleted in new
chr16_KI270854v1_alt	1038	11516	chr16_KI270854v1_alt:1038-11516	0	+	1109	9500	0	10	151,69,153,52,136,159,94,105,218,481,	0,3063,3620,4453,5532,8316,8798,9079,9468,9997,
#Deleted in new
chr16_KI270854v1_alt	1060	11633	chr16_KI270854v1_alt:1060-11633	0	+	1109	5875	789624	11	129,69,52,149,63,136,125,94,105,218,598,	0,3041,4431,4770,4975,5510,8328,8776,9057,9446,9975,
#Deleted in new
chr16_KI270854v1_alt	1062	10222	chr16_KI270854v1_alt:1062-10222	0	+	1109	10222	789624	7	127,69,52,156,159,94,105,	0,3039,4429,5508,8292,8774,9055,
#Deleted in new
chr16_KI270854v1_alt	1071	10617	chr16_KI270854v1_alt:1071-10617	0	+	1109	5875	789624	9	118,69,52,268,136,125,94,105,111,	0,3030,4420,4759,5499,8317,8765,9046,9435,
#Deleted in new
chr16_KI270854v1_alt	1106	6677	chr16_KI270854v1_alt:1106-6677	0	+	1109	5875	789624	5	83,69,52,205,152,	0,2995,4385,4724,5419,
#Deleted in new
chr16_KI270854v1_alt	1150	6317	chr16_KI270854v1_alt:1150-6317	0	+	1150	1150	8553170	4	39,69,488,282,	0,2951,4341,4885,
#Deleted in new
chr16_KI270854v1_alt	5849	6579	chr16_KI270854v1_alt:5849-6579	0	+	5849	5849	8553170	3	74,119,54,	0,130,676,
#Deleted in new
chr16_KI270854v1_alt	6040	11633	chr16_KI270854v1_alt:6040-11633	0	+	6040	6040	8553170	5	58,162,94,105,598,	0,3348,3796,4077,4995,
#Deleted in new
chr16_KI270854v1_alt	6091	9441	chr16_KI270854v1_alt:6091-9441	0	+	6091	6091	8553170	2	615,87,	0,3263,
#Deleted in new
chr16_KI270854v1_alt	6572	11074	chr16_KI270854v1_alt:6572-11074	0	+	6572	9537	789624	6	134,162,63,105,218,39,	0,2816,3264,3545,3934,4463,
#Deleted in new
chr16_KI270854v1_alt	8744	11627	chr16_KI270854v1_alt:8744-11627	0	+	8744	8744	8553170	4	769,94,607,592,	0,1092,1373,2291,
#Deleted in new
chr16_KI270854v1_alt	9257	10196	chr16_KI270854v1_alt:9257-10196	0	+	9257	9257	8553170	2	256,360,	0,579,
#Deleted in new
chr16_KI270854v1_alt	23388	23689	chr16_KI270854v1_alt:23388-23689	3	-	23388	23388	8553170	1	301,	0,
#Deleted in new
chr16_KI270854v1_alt	24764	125679	chr16_KI270854v1_alt:24764-125679	3	+	25152	123507	0	14	1102,94,95,212,150,36,94,104,141,82,138,156,141,2286,	0,37607,46837,58065,64390,74930,81126,83451,88515,96846,97657,98025,98362,98629,
#Deleted in new
chr16_KI270854v1_alt	25524	125023	chr16_KI270854v1_alt:25524-125023	0	+	25524	123507	789624	15	342,94,95,212,150,135,36,94,104,141,82,138,156,141,1630,	0,36847,46077,57305,63630,65915,74170,80366,82691,87755,96086,96897,97265,97602,97869,
#Deleted in new
chr16_KI270854v1_alt	38442	38543	chr16_KI270854v1_alt:38442-38543	3	-	38442	38442	8553170	1	101,	0,
#Deleted in new
chr16_KI270854v1_alt	50546	52284	chr16_KI270854v1_alt:50546-52284	7	+	50546	50546	16724991	3	141,63,74,	0,961,1664,
#Deleted in new
chr16_KI270854v1_alt	75155	125146	chr16_KI270854v1_alt:75155-125146	1	+	75336	123507	0	12	196,212,150,36,94,104,141,82,138,156,141,1753,	0,7674,13999,24539,30735,33060,38124,46455,47266,47634,47971,48238,
#Deleted in new
chr16_KI270854v1_alt	75174	108297	chr16_KI270854v1_alt:75174-108297	0	+	82856	108297	789624	6	230,212,150,36,94,82,	0,7655,13980,24520,30716,33041,
#Deleted in new
chr16_KI270854v1_alt	75229	105950	chr16_KI270854v1_alt:75229-105950	0	+	75336	105950	789624	5	122,212,150,36,60,	0,7600,13925,24465,30661,
#Deleted in new
chr16_KI270854v1_alt	75229	89407	chr16_KI270854v1_alt:75229-89407	0	+	75229	75229	8553170	3	122,212,253,	0,7600,13925,
#Deleted in new
chr16_KI270854v1_alt	82961	100319	chr16_KI270854v1_alt:82961-100319	0	+	82961	100172	789624	5	80,150,135,36,157,	0,6193,8478,16733,17201,
#Deleted in new
chr16_KI270854v1_alt	89245	100029	chr16_KI270854v1_alt:89245-100029	0	+	89245	89245	8553170	3	59,135,335,	0,2194,10449,
#Deleted in new
chr16_KI270854v1_alt	105636	121686	chr16_KI270854v1_alt:105636-121686	0	+	105636	105636	8553170	4	348,104,141,76,	0,2579,7643,15974,
#Deleted in new
chr16_KI270854v1_alt	113072	121776	chr16_KI270854v1_alt:113072-121776	0	+	113072	113072	8553170	2	348,166,	0,8538,
#Deleted in new
chr16_KI270854v1_alt	113182	122430	chr16_KI270854v1_alt:113182-122430	0	+	113182	113182	8553170	3	238,82,9,	0,8428,9239,
#Deleted in new
chr16_KI270854v1_alt	127822	130075	chr16_KI270854v1_alt:127822-130075	3	-	127822	127822	8553170	1	2253,	0,
#Deleted in new
chr16_KI270854v1_alt	130384	130697	chr16_KI270854v1_alt:130384-130697	3	+	130384	130384	8553170	1	313,	0,
#Deleted in new
chr16_KI270854v1_alt	130415	130697	chr16_KI270854v1_alt:130415-130697	0	+	130415	130415	8553170	1	282,	0,
#Deleted in new
chr16_KI270854v1_alt	130490	130697	chr16_KI270854v1_alt:130490-130697	0	+	130490	130490	8553170	1	207,	0,
#Deleted in new
chr16_KI270854v1_alt	130523	130697	chr16_KI270854v1_alt:130523-130697	0	+	130523	130523	8553170	1	174,	0,
#Deleted in new
chr16_KI270855v1_alt	15124	39961	chr16_KI270855v1_alt:15124-39961	3	+	32644	37888	789624	8	695,60,238,173,177,134,119,2873,	0,14349,17454,18586,20040,20299,20514,21964,
#Deleted in new
chr16_KI270855v1_alt	25030	28704	chr16_KI270855v1_alt:25030-28704	3	-	25030	25030	789624	4	109,85,65,81,	0,603,1763,3593,
#Deleted in new
chr16_KI270855v1_alt	31912	53589	chr16_KI270855v1_alt:31912-53589	1	-	32039	53558	789624	5	226,66,137,85,34,	0,9371,9819,11658,21643,
#Deleted in new
chr16_KI270855v1_alt	32587	39961	chr16_KI270855v1_alt:32587-39961	1	+	32644	37888	789624	6	229,173,177,134,119,2873,	0,1123,2577,2836,3051,4501,
#Deleted in new
chr16_KI270855v1_alt	40611	53696	chr16_KI270855v1_alt:40611-53696	1	-	40682	53558	789624	5	158,66,137,85,141,	0,672,1120,2959,12944,
#Deleted in new
chr16_KI270855v1_alt	40612	43914	chr16_KI270855v1_alt:40612-43914	0	-	40612	40612	8553170	4	157,66,137,344,	0,671,1119,2958,
#Deleted in new
chr16_KI270855v1_alt	40614	118910	chr16_KI270855v1_alt:40614-118910	3	-	40682	118841	789624	31	155,66,137,85,87,92,136,117,90,142,86,105,143,87,109,176,127,138,93,146,58,55,83,87,51,77,184,71,75,97,129,	0,669,1117,2956,16996,18877,19676,20075,21004,21188,21986,22152,22651,22870,23069,23693,24320,25984,26305,26483,26711,27199,49694,50253,56997,67199,69209,69889,74064,75016,78167,
#Deleted in new
chr16_KI270855v1_alt	40614	53379	chr16_KI270855v1_alt:40614-53379	0	-	41849	53271	789624	5	155,66,305,85,121,	0,669,1117,2956,12644,
#Deleted in new
chr16_KI270855v1_alt	40614	44125	chr16_KI270855v1_alt:40614-44125	1	-	40682	43909	789624	5	155,66,137,85,279,	0,669,1117,2956,3232,
#Deleted in new
chr16_KI270855v1_alt	40614	122817	chr16_KI270855v1_alt:40614-122817	0	-	64096	118841	789624	33	155,66,216,85,87,92,136,117,90,142,86,105,143,87,109,55,176,127,138,93,146,58,55,83,87,51,77,184,71,75,97,503,23,	0,669,1117,2956,16996,18877,19676,20075,21004,21188,21986,22152,22651,22870,23069,23457,23693,24320,25984,26305,26483,26711,27199,49694,50253,56997,67199,69209,69889,74064,75016,78167,82180,
#Deleted in new
chr16_KI270855v1_alt	40614	43988	chr16_KI270855v1_alt:40614-43988	0	-	40614	40614	8553170	4	155,66,216,142,	0,669,1117,3232,
#Deleted in new
chr16_KI270855v1_alt	40614	53594	chr16_KI270855v1_alt:40614-53594	0	-	40614	40614	8553170	5	155,66,305,85,39,	0,669,1117,2956,12941,
#Deleted in new
chr16_KI270855v1_alt	40614	53639	chr16_KI270855v1_alt:40614-53639	0	-	41849	53558	789624	5	155,66,216,85,84,	0,669,1117,2956,12941,
#Deleted in new
chr16_KI270855v1_alt	40614	48228	chr16_KI270855v1_alt:40614-48228	1	-	40682	43909	789624	6	155,66,137,85,112,119,	0,669,1117,2956,3232,7495,
#Deleted in new
chr16_KI270855v1_alt	40614	44497	chr16_KI270855v1_alt:40614-44497	1	-	40682	44461	789624	5	155,66,137,85,75,	0,669,1117,2956,3808,
#Deleted in new
chr16_KI270855v1_alt	40614	56943	chr16_KI270855v1_alt:40614-56943	1	-	40682	53558	789624	6	155,66,137,85,31,4,	0,669,1117,2956,12941,16325,
#Deleted in new
chr16_KI270855v1_alt	40681	53617	chr16_KI270855v1_alt:40681-53617	0	-	41751	53617	789624	4	88,66,137,62,	0,602,1050,12874,
#Deleted in new
chr16_KI270855v1_alt	41304	61676	chr16_KI270855v1_alt:41304-61676	0	-	41304	41304	8553170	7	45,137,87,92,136,117,58,	0,427,16306,18187,18986,19385,20314,
#Deleted in new
chr16_KI270855v1_alt	42015	44057	chr16_KI270855v1_alt:42015-44057	0	-	42015	42015	8553170	3	21,85,211,	0,1555,1831,
#Deleted in new
chr16_KI270855v1_alt	47613	48302	chr16_KI270855v1_alt:47613-48302	0	-	47613	47613	8553170	2	282,193,	0,496,
#Deleted in new
chr16_KI270855v1_alt	47613	53644	chr16_KI270855v1_alt:47613-53644	2	-	47613	47613	8553170	2	717,89,	0,5942,
#Deleted in new
chr16_KI270855v1_alt	49017	50972	chr16_KI270855v1_alt:49017-50972	3	-	49017	49017	8553170	1	1955,	0,
#Deleted in new
chr16_KI270855v1_alt	56866	118987	chr16_KI270855v1_alt:56866-118987	1	-	57482	118841	789624	28	622,87,92,136,117,90,142,86,105,143,87,109,176,127,138,93,146,58,55,83,87,51,77,184,71,75,97,206,	0,744,2625,3424,3823,4752,4936,5734,5900,6399,6618,6817,7441,8068,9732,10053,10231,10459,10947,33442,34001,40745,50947,52957,53637,57812,58764,61915,
#Deleted in new
chr16_KI270855v1_alt	56868	118950	chr16_KI270855v1_alt:56868-118950	0	-	118094	118841	789624	29	620,87,92,136,117,90,142,86,105,143,87,109,176,127,138,93,146,58,55,83,87,51,77,123,71,75,97,138,169,	0,742,2623,3422,3821,4750,4934,5732,5898,6397,6616,6815,7439,8066,9730,10051,10229,10457,10945,33440,33999,40743,50945,53016,53635,57810,58762,61169,61913,
#Deleted in new
chr16_KI270855v1_alt	56925	118952	chr16_KI270855v1_alt:56925-118952	1	-	57482	118841	789624	28	563,87,92,136,117,90,142,86,105,143,87,109,176,127,138,93,146,58,55,83,87,51,77,184,17,75,97,171,	0,685,2566,3365,3764,4693,4877,5675,5841,6340,6559,6758,7382,8009,9673,9994,10172,10400,10888,33383,33942,40686,50888,52898,53578,57753,58705,61856,
#Deleted in new
chr16_KI270855v1_alt	57288	118950	chr16_KI270855v1_alt:57288-118950	1	-	57482	118841	789624	26	200,87,92,136,117,90,142,86,105,143,87,109,176,127,138,93,146,58,55,83,87,51,77,75,97,169,	0,322,2203,3002,3401,4330,4514,5312,5478,5977,6196,6395,7019,7646,9310,9631,9809,10037,10525,33020,33579,40323,50525,57390,58342,61493,
#Deleted in new
chr16_KI270855v1_alt	57292	61950	chr16_KI270855v1_alt:57292-61950	0	-	59580	61950	789624	6	196,87,92,117,90,148,	0,318,2199,3397,4326,4510,
#Deleted in new
chr16_KI270855v1_alt	57404	60773	chr16_KI270855v1_alt:57404-60773	0	-	57436	60773	789624	4	293,92,136,84,	0,2087,2886,3285,
#Deleted in new
chr16_KI270855v1_alt	58755	65551	chr16_KI270855v1_alt:58755-65551	0	-	58755	58755	8553170	12	828,136,117,90,142,86,105,143,87,109,176,617,	0,1535,1934,2863,3047,3845,4011,4510,4729,4928,5552,6179,
#Deleted in new
chr16_KI270855v1_alt	59697	109900	chr16_KI270855v1_alt:59697-109900	0	-	59697	59697	8553170	20	1109,90,142,86,105,143,87,109,176,127,138,93,146,58,55,83,87,51,77,16,	0,1921,2105,2903,3069,3568,3787,3986,4610,5237,6901,7222,7400,7628,8116,30611,31170,37914,48116,50187,
#Deleted in new
chr16_KI270855v1_alt	60086	61651	chr16_KI270855v1_alt:60086-61651	0	-	60086	60086	8553170	3	340,117,33,	0,603,1532,
#Deleted in new
chr16_KI270855v1_alt	60764	64225	chr16_KI270855v1_alt:60764-64225	0	-	60764	60764	8553170	8	42,90,142,86,105,143,87,542,	0,854,1038,1836,2002,2501,2720,2919,
#Deleted in new
chr16_KI270855v1_alt	61172	61947	chr16_KI270855v1_alt:61172-61947	0	-	61172	61172	8553170	2	536,145,	0,630,
#Deleted in new
chr16_KI270855v1_alt	62600	118919	chr16_KI270855v1_alt:62600-118919	0	-	64096	118841	789624	17	86,105,143,87,109,55,176,127,138,93,146,58,55,83,87,51,138,	0,166,665,884,1083,1471,1707,2334,3998,4319,4497,4725,5213,27708,28267,35011,56181,
#Deleted in new
chr16_KI270855v1_alt	62767	118949	chr16_KI270855v1_alt:62767-118949	0	-	63728	107878	789624	10	104,143,87,109,147,51,77,184,17,147,	0,498,717,916,1540,34844,45046,47056,47736,56035,
#Deleted in new
chr16_KI270855v1_alt	63972	66894	chr16_KI270855v1_alt:63972-66894	0	-	63972	63972	8553170	3	511,127,296,	0,962,2626,
#Deleted in new
chr16_KI270855v1_alt	64012	118919	chr16_KI270855v1_alt:64012-118919	0	-	90372	118841	789624	16	471,127,138,93,146,58,55,83,87,51,77,123,71,75,97,138,	0,922,2586,2907,3085,3313,3801,26296,26855,33599,43801,45872,46491,50666,51618,54769,
#Deleted in new
chr16_KI270855v1_alt	66974	119252	chr16_KI270855v1_alt:66974-119252	0	-	66974	119206	789624	8	38,146,58,55,83,87,51,145,	0,123,351,839,23334,23893,30637,52133,
#Deleted in new
chr16_KI270855v1_alt	67152	118919	chr16_KI270855v1_alt:67152-118919	0	-	67152	118841	789624	7	91,58,55,83,87,51,138,	0,173,661,23156,23715,30459,51629,
#Deleted in new
chr16_KI270855v1_alt	74170	85851	chr16_KI270855v1_alt:74170-85851	3	+	83200	85222	789624	2	146,2660,	0,9021,
#Deleted in new
chr16_KI270855v1_alt	90087	97663	chr16_KI270855v1_alt:90087-97663	0	-	90087	90087	8553170	3	304,87,52,	0,780,7524,
#Deleted in new
chr16_KI270855v1_alt	90335	118952	chr16_KI270855v1_alt:90335-118952	0	-	90335	118841	789624	7	56,78,33,71,75,97,171,	0,532,19639,20168,24343,25295,28446,
#Deleted in new
chr16_KI270855v1_alt	90898	118920	chr16_KI270855v1_alt:90898-118920	2	-	90898	107878	789624	6	56,51,77,184,71,139,	0,6713,16915,18925,19605,27883,
#Deleted in new
chr16_KI270855v1_alt	90904	119253	chr16_KI270855v1_alt:90904-119253	0	-	90904	118841	789624	9	50,51,77,123,71,75,97,142,146,	0,6707,16909,18980,19599,23774,24726,27877,28203,
#Deleted in new
chr16_KI270855v1_alt	90929	118949	chr16_KI270855v1_alt:90929-118949	0	-	90929	107878	789624	6	25,51,77,184,17,147,	0,6682,16884,18894,19574,27873,
#Deleted in new
chr16_KI270855v1_alt	97641	118918	chr16_KI270855v1_alt:97641-118918	0	-	99737	118841	789624	6	21,133,77,75,97,137,	0,1999,10172,17037,17989,21140,
#Deleted in new
chr16_KI270855v1_alt	97645	119252	chr16_KI270855v1_alt:97645-119252	0	-	97645	119206	789624	7	17,77,184,71,75,97,145,	0,10168,12178,12858,17033,17985,21462,
#Deleted in new
chr16_KI270855v1_alt	107793	118902	chr16_KI270855v1_alt:107793-118902	0	-	110568	118841	789624	5	97,184,71,75,121,	0,2030,2710,6885,10988,
#Deleted in new
chr16_KI270855v1_alt	107832	118950	chr16_KI270855v1_alt:107832-118950	0	-	107832	118841	789624	6	58,123,71,75,97,169,	0,2052,2671,6846,7798,10949,
#Deleted in new
chr16_KI270855v1_alt	107845	115812	chr16_KI270855v1_alt:107845-115812	0	-	107845	107878	789624	5	45,184,71,75,182,	0,1978,2658,6833,7785,
#Deleted in new
chr16_KI270855v1_alt	107866	116749	chr16_KI270855v1_alt:107866-116749	0	-	107866	107866	8553170	6	24,184,71,75,97,120,	0,1957,2637,6812,7764,8763,
#Deleted in new
chr16_KI270855v1_alt	107867	118256	chr16_KI270855v1_alt:107867-118256	0	-	107867	107867	8553170	6	23,184,71,75,97,168,	0,1956,2636,6811,7763,10221,
#Deleted in new
chr16_KI270855v1_alt	109847	118220	chr16_KI270855v1_alt:109847-118220	0	-	109847	109847	8553170	5	160,71,75,97,183,	0,656,4831,5783,8190,
#Deleted in new
chr16_KI270855v1_alt	110508	115259	chr16_KI270855v1_alt:110508-115259	0	-	110508	110508	8553170	3	66,75,405,	0,4170,4346,
#Deleted in new
chr16_KI270855v1_alt	118783	128028	chr16_KI270855v1_alt:118783-128028	0	-	118783	118841	789624	2	501,228,	0,9017,
#Deleted in new
chr16_KI270855v1_alt	119047	127846	chr16_KI270855v1_alt:119047-127846	0	-	119047	119047	8553170	3	237,195,46,	0,3634,8753,
#Deleted in new
chr16_KI270855v1_alt	128127	159098	chr16_KI270855v1_alt:128127-159098	3	+	128204	157237	0	12	288,134,84,201,153,148,65,129,116,98,117,1230,	0,8579,11597,15570,16463,17212,18859,21081,22928,24595,29006,29741,
#Deleted in new
chr16_KI270855v1_alt	128182	159098	chr16_KI270855v1_alt:128182-159098	1	+	128204	157891	0	11	233,134,84,201,153,148,65,129,116,98,1230,	0,8524,11542,15515,16408,17157,18804,21026,22873,24540,29686,
#Deleted in new
chr16_KI270855v1_alt	128187	158274	chr16_KI270855v1_alt:128187-158274	0	+	128204	144606	789624	9	228,70,153,148,65,129,116,98,406,	0,15641,16403,17152,18799,21021,22868,24535,29681,
#Deleted in new
chr16_KI270855v1_alt	128187	144631	chr16_KI270855v1_alt:128187-144631	0	+	128204	139747	789624	4	228,84,201,41,	0,11537,15510,16403,
#Deleted in new
chr16_KI270855v1_alt	128187	144706	chr16_KI270855v1_alt:128187-144706	0	+	128204	136790	789624	6	228,74,134,84,201,116,	0,5734,8519,11537,15510,16403,
#Deleted in new
chr16_KI270855v1_alt	128190	134191	chr16_KI270855v1_alt:128190-134191	0	+	128190	128190	8553170	2	225,270,	0,5731,
#Deleted in new
chr16_KI270855v1_alt	128201	144716	chr16_KI270855v1_alt:128201-144716	0	+	128204	144716	789624	4	214,134,84,126,	0,8505,11523,16389,
#Deleted in new
chr16_KI270855v1_alt	128370	139948	chr16_KI270855v1_alt:128370-139948	0	+	128370	128370	8553170	3	45,134,224,	0,8336,11354,
#Deleted in new
chr16_KI270855v1_alt	129224	129703	chr16_KI270855v1_alt:129224-129703	3	+	129224	129224	8553170	1	479,	0,
#Deleted in new
chr16_KI270855v1_alt	132844	133426	chr16_KI270855v1_alt:132844-133426	3	+	132844	132844	8553170	1	582,	0,
#Deleted in new
chr16_KI270855v1_alt	135524	135710	chr16_KI270855v1_alt:135524-135710	7	-	135524	135524	16724991	1	186,	0,
#Deleted in new
chr16_KI270855v1_alt	136168	143800	chr16_KI270855v1_alt:136168-143800	0	+	136168	136168	8553170	4	257,134,84,103,	0,538,3556,7529,
#Deleted in new
chr16_KI270855v1_alt	136620	143724	chr16_KI270855v1_alt:136620-143724	0	+	136620	136620	8553170	3	220,84,27,	0,3104,7077,
#Deleted in new
chr16_KI270855v1_alt	142579	150278	chr16_KI270855v1_alt:142579-150278	0	+	142579	142579	8553170	4	1319,897,65,1070,	0,2011,4407,6629,
#Deleted in new
chr16_KI270855v1_alt	151876	159095	chr16_KI270855v1_alt:151876-159095	0	+	151876	151876	8553170	3	944,117,1227,	0,5257,5992,
#Deleted in new
chr16_KI270855v1_alt	157814	159098	chr16_KI270855v1_alt:157814-159098	0	+	157814	157814	8553170	2	289,288,	0,996,
#Deleted in new
chr16_KI270855v1_alt	164002	177218	chr16_KI270855v1_alt:164002-177218	1	-	164102	176455	0	6	280,191,250,239,74,342,	0,1980,4473,7547,12413,12874,
#Deleted in new
chr16_KI270855v1_alt	164013	178629	chr16_KI270855v1_alt:164013-178629	3	-	164102	176455	0	6	269,191,250,239,700,70,	0,1969,4462,7536,12402,14546,
#Deleted in new
chr16_KI270855v1_alt	164014	168728	chr16_KI270855v1_alt:164014-168728	0	-	165799	168728	789624	4	268,93,191,253,	0,1728,1968,4461,
#Deleted in new
chr16_KI270855v1_alt	164016	176945	chr16_KI270855v1_alt:164016-176945	1	-	164102	176455	0	6	266,191,250,239,74,213,	0,1966,4459,7533,12399,12716,
#Deleted in new
chr16_KI270855v1_alt	164016	168659	chr16_KI270855v1_alt:164016-168659	0	-	164102	168659	789624	3	266,209,184,	0,1948,4459,
#Deleted in new
chr16_KI270855v1_alt	164017	176966	chr16_KI270855v1_alt:164017-176966	1	-	164102	176455	0	6	265,191,250,239,74,221,	0,1965,4458,7532,12398,12728,
#Deleted in new
chr16_KI270855v1_alt	164021	168497	chr16_KI270855v1_alt:164021-168497	0	-	164102	168497	789624	3	261,173,22,	0,1979,4454,
#Deleted in new
chr16_KI270855v1_alt	164107	166563	chr16_KI270855v1_alt:164107-166563	0	-	164107	164107	8553170	2	175,581,	0,1875,
#Deleted in new
chr16_KI270855v1_alt	165890	171688	chr16_KI270855v1_alt:165890-171688	0	-	165890	171688	789624	3	283,250,139,	0,2585,5659,
#Deleted in new
chr16_KI270855v1_alt	166065	178620	chr16_KI270855v1_alt:166065-178620	0	-	171935	176455	789624	6	108,250,195,74,239,61,	0,2410,5761,10350,10811,12494,
#Deleted in new
chr16_KI270855v1_alt	166125	172008	chr16_KI270855v1_alt:166125-172008	0	-	166125	166125	8553170	4	48,250,159,182,	0,2350,2724,5701,
#Deleted in new
chr16_KI270855v1_alt	168485	176974	chr16_KI270855v1_alt:168485-176974	0	-	173638	176455	789624	5	240,239,136,74,98,	0,3064,5151,7930,8391,
#Deleted in new
chr16_KI270855v1_alt	168533	176865	chr16_KI270855v1_alt:168533-176865	0	-	168533	176455	789624	5	192,239,93,74,133,	0,3016,5146,7882,8199,
#Deleted in new
chr16_KI270855v1_alt	169327	176948	chr16_KI270855v1_alt:169327-176948	0	-	169327	169327	8553170	4	177,239,74,72,	0,2222,7088,7549,
#Deleted in new
chr16_KI270855v1_alt	171713	176878	chr16_KI270855v1_alt:171713-176878	0	-	171713	171713	8553170	4	75,136,74,146,	0,1923,4702,5019,
#Deleted in new
chr16_KI270855v1_alt	171765	176778	chr16_KI270855v1_alt:171765-176778	0	-	171765	171765	8553170	4	23,136,74,46,	0,1871,4650,4967,
#Deleted in new
chr16_KI270855v1_alt	171952	176879	chr16_KI270855v1_alt:171952-176879	0	-	171952	171952	8553170	4	69,136,74,134,	0,1684,4463,4793,
#Deleted in new
chr16_KI270855v1_alt	177006	198086	chr16_KI270855v1_alt:177006-198086	0	-	177006	177006	8553170	4	109,98,116,249,	0,4780,7080,20831,
#Deleted in new
chr16_KI270855v1_alt	177012	211753	chr16_KI270855v1_alt:177012-211753	0	+	207847	211753	789624	5	158,127,118,492,19,	0,30794,32205,33023,34722,
#Deleted in new
chr16_KI270855v1_alt	177025	212669	chr16_KI270855v1_alt:177025-212669	3	+	207847	212079	0	6	145,127,118,492,127,718,	0,30781,32192,33010,34709,34926,
#Deleted in new
chr16_KI270855v1_alt	178246	212670	chr16_KI270855v1_alt:178246-212670	1	+	207847	212079	0	6	564,127,118,492,127,719,	0,29560,30971,31789,33488,33705,
#Deleted in new
chr16_KI270855v1_alt	178662	212669	chr16_KI270855v1_alt:178662-212669	1	+	207847	212079	0	7	148,99,127,118,492,127,718,	0,12304,29144,30555,31373,33072,33289,
#Deleted in new
chr16_KI270855v1_alt	178662	212669	chr16_KI270855v1_alt:178662-212669	1	+	207847	212079	0	6	326,127,118,492,127,718,	0,29144,30555,31373,33072,33289,
#Deleted in new
chr16_KI270855v1_alt	178662	212618	chr16_KI270855v1_alt:178662-212618	1	+	207847	212079	0	7	148,118,127,118,492,127,667,	0,7297,29144,30555,31373,33072,33289,
#Deleted in new
chr16_KI270855v1_alt	178701	212669	chr16_KI270855v1_alt:178701-212669	1	+	207847	212079	0	6	39,127,118,492,127,718,	0,29105,30516,31334,33033,33250,
#Deleted in new
chr16_KI270855v1_alt	178728	212159	chr16_KI270855v1_alt:178728-212159	1	+	209218	212079	0	5	82,118,492,127,208,	0,30489,31307,33006,33223,
#Deleted in new
chr16_KI270855v1_alt	178734	210223	chr16_KI270855v1_alt:178734-210223	0	+	207847	210223	789624	4	254,127,118,188,	0,29072,30483,31301,
#Deleted in new
chr16_KI270855v1_alt	178734	210161	chr16_KI270855v1_alt:178734-210161	0	+	207847	210161	789624	5	76,102,127,118,126,	0,7225,29072,30483,31301,
#Deleted in new
chr16_KI270855v1_alt	178761	210225	chr16_KI270855v1_alt:178761-210225	0	+	207847	210225	789624	5	49,99,127,118,190,	0,12205,29045,30456,31274,
#Deleted in new
chr16_KI270855v1_alt	178764	199085	chr16_KI270855v1_alt:178764-199085	0	+	178764	178764	8553170	4	46,118,128,617,	0,7195,19458,19704,
#Deleted in new
chr16_KI270855v1_alt	178781	210520	chr16_KI270855v1_alt:178781-210520	0	+	207847	210520	789624	5	29,118,127,118,485,	0,7178,29025,30436,31254,
#Deleted in new
chr16_KI270855v1_alt	198180	212669	chr16_KI270855v1_alt:198180-212669	1	+	207847	212079	0	6	170,127,118,492,127,718,	0,9626,11037,11855,13554,13771,
#Deleted in new
chr16_KI270855v1_alt	198180	212224	chr16_KI270855v1_alt:198180-212224	1	+	207847	212079	0	8	170,121,216,127,118,492,127,273,	0,288,6886,9626,11037,11855,13554,13771,
#Deleted in new
chr16_KI270855v1_alt	198180	210227	chr16_KI270855v1_alt:198180-210227	0	+	207847	210227	789624	4	170,127,118,192,	0,9626,11037,11855,
#Deleted in new
chr16_KI270855v1_alt	198468	212669	chr16_KI270855v1_alt:198468-212669	1	+	198468	212079	789624	6	121,127,118,492,127,718,	0,9338,10749,11567,13266,13483,
#Deleted in new
chr16_KI270855v1_alt	210381	212102	chr16_KI270855v1_alt:210381-212102	0	+	210381	211920	789624	2	146,368,	0,1353,
#Deleted in new
chr16_KI270855v1_alt	212997	216987	chr16_KI270855v1_alt:212997-216987	1	-	214894	216453	789624	5	2009,274,156,99,90,	0,2116,3021,3371,3900,
#Deleted in new
chr16_KI270855v1_alt	213061	217432	chr16_KI270855v1_alt:213061-217432	3	-	214894	216453	789624	5	1945,274,156,99,535,	0,2052,2957,3307,3836,
#Deleted in new
chr16_KI270855v1_alt	213646	216987	chr16_KI270855v1_alt:213646-216987	1	-	214894	216453	789624	5	1360,274,156,99,90,	0,1467,2372,2722,3251,
#Deleted in new
chr16_KI270855v1_alt	213743	216987	chr16_KI270855v1_alt:213743-216987	1	-	214983	216154	789624	3	1263,156,90,	0,2275,3154,
#Deleted in new
chr16_KI270855v1_alt	214128	216987	chr16_KI270855v1_alt:214128-216987	1	-	214894	216453	789624	5	878,157,156,99,90,	0,985,1890,2240,2769,
#Deleted in new
chr16_KI270855v1_alt	214255	216987	chr16_KI270855v1_alt:214255-216987	1	-	214894	216453	789624	5	751,157,36,99,90,	0,858,1883,2113,2642,
#Deleted in new
chr16_KI270855v1_alt	214721	216987	chr16_KI270855v1_alt:214721-216987	0	-	215189	216154	789624	5	285,208,156,99,90,	0,392,1297,1647,2176,
#Deleted in new
chr16_KI270855v1_alt	214776	216987	chr16_KI270855v1_alt:214776-216987	0	-	214776	216453	789624	4	158,156,99,90,	0,1242,1592,2121,
#Deleted in new
chr16_KI270855v1_alt	215120	216472	chr16_KI270855v1_alt:215120-216472	0	-	215120	216453	789624	3	216,156,104,	0,898,1248,
#Deleted in new
chr16_KI270855v1_alt	215189	216987	chr16_KI270855v1_alt:215189-216987	0	-	215189	216154	789624	3	198,156,90,	0,829,1708,
#Deleted in new
chr16_KI270855v1_alt	215238	216987	chr16_KI270855v1_alt:215238-216987	0	-	215238	216154	789624	3	149,156,34,	0,780,1715,
#Deleted in new
chr16_KI270855v1_alt	216016	216987	chr16_KI270855v1_alt:216016-216987	0	-	216016	216453	789624	3	158,99,90,	0,352,881,
#Deleted in new
chr16_KI270855v1_alt	216367	224848	chr16_KI270855v1_alt:216367-224848	0	-	216367	216453	789624	3	100,90,109,	0,530,8372,
#Deleted in new
chr16_KI270855v1_alt	226149	226625	chr16_KI270855v1_alt:226149-226625	0	-	226149	226149	8553170	1	476,	0,
#Deleted in new
chr16_KI270856v1_alt	2130	2282	chr16_KI270856v1_alt:2130-2282	0	-	2130	2130	8553170	1	152,	0,
#Deleted in new
chr16_KI270856v1_alt	2130	2233	chr16_KI270856v1_alt:2130-2233	0	-	2130	2130	8553170	1	103,	0,
#Deleted in new
chr16_KI270856v1_alt	8415	14362	chr16_KI270856v1_alt:8415-14362	3	-	8415	8415	789624	3	426,101,135,	0,4911,5812,
#Deleted in new
chr16_KI270856v1_alt	8689	14375	chr16_KI270856v1_alt:8689-14375	1	-	8689	8689	8553170	4	152,49,101,148,	0,1102,4637,5538,
#Deleted in new
chr16_KI270856v1_alt	13326	14425	chr16_KI270856v1_alt:13326-14425	3	-	13326	13326	8553170	2	101,198,	0,901,
#Deleted in new
chr16_KI270856v1_alt	19241	20561	chr16_KI270856v1_alt:19241-20561	3	+	19241	19241	789624	2	182,302,	0,1018,
#Deleted in new
chr16_KI270856v1_alt	41592	48570	chr16_KI270856v1_alt:41592-48570	3	-	41719	48453	789624	2	743,530,	0,6448,
#Deleted in new
chr16_KQ090026v1_alt	2123	2458	chr16_KQ090026v1_alt:2123-2458	7	-	2123	2123	16724991	1	335,	0,
#Deleted in new
chr16_KQ090026v1_alt	9633	11749	chr16_KQ090026v1_alt:9633-11749	1	+	9712	11624	0	4	160,79,103,489,	0,246,525,1627,
#Deleted in new
chr16_KQ090026v1_alt	9717	19047	chr16_KQ090026v1_alt:9717-19047	2	+	9717	17865	789624	4	76,79,103,1210,	0,162,441,8120,
#Deleted in new
chr16_KQ090026v1_alt	9759	10446	chr16_KQ090026v1_alt:9759-10446	0	+	9759	9759	8553170	2	34,567,	0,120,
#Deleted in new
chr16_KQ090026v1_alt	9768	11440	chr16_KQ090026v1_alt:9768-11440	0	+	9768	9768	8553170	3	25,382,180,	0,111,1492,
#Deleted in new
chr16_KQ090026v1_alt	9770	10638	chr16_KQ090026v1_alt:9770-10638	0	+	9770	10265	789624	3	23,79,480,	0,109,388,
#Deleted in new
chr16_KQ090026v1_alt	9832	11747	chr16_KQ090026v1_alt:9832-11747	1	+	9888	11624	789624	3	126,103,487,	0,326,1428,
#Deleted in new
chr16_KQ090026v1_alt	19029	22100	chr16_KQ090026v1_alt:19029-22100	5	-	19029	19029	16724991	2	364,2491,	0,580,
#Deleted in new
chr16_KQ090026v1_alt	19029	22206	chr16_KQ090026v1_alt:19029-22206	7	-	19029	19029	16724991	3	364,1452,1065,	0,580,2112,
#Deleted in new
chr16_KQ090026v1_alt	19029	21938	chr16_KQ090026v1_alt:19029-21938	5	-	19029	19029	16724991	4	364,166,92,28,	0,1595,2112,2881,
#Deleted in new
chr16_KQ090026v1_alt	19029	22172	chr16_KQ090026v1_alt:19029-22172	5	-	19029	19029	16724991	5	364,166,27,92,103,	0,1595,2005,2112,3040,
#Deleted in new
chr16_KQ090026v1_alt	19029	21310	chr16_KQ090026v1_alt:19029-21310	5	-	19029	19029	16724991	3	364,166,169,	0,1595,2112,
#Deleted in new
chr16_KQ090026v1_alt	19117	20790	chr16_KQ090026v1_alt:19117-20790	5	-	19117	19117	16724991	4	276,161,270,166,	0,492,1154,1507,
#Deleted in new
chr16_KQ090026v1_alt	32157	36972	chr16_KQ090026v1_alt:32157-36972	1	-	32157	36972	789624	8	49,34,154,158,278,169,22,72,	0,115,491,1180,2900,3402,4034,4743,
#Deleted in new
chr16_KQ090026v1_alt	32157	37562	chr16_KQ090026v1_alt:32157-37562	1	-	32157	37562	789624	8	49,34,154,158,278,172,27,82,	0,115,491,1180,2900,3408,4148,5323,
#Deleted in new
chr16_KQ090026v1_alt	32157	37562	chr16_KQ090026v1_alt:32157-37562	1	-	32157	37562	789624	8	49,34,154,158,278,172,27,82,	0,115,491,1180,2900,3408,4148,5323,
#Deleted in new
chr16_KQ090026v1_alt	32157	36972	chr16_KQ090026v1_alt:32157-36972	1	-	32157	36972	789624	8	49,34,154,158,278,169,22,72,	0,115,491,1180,2900,3402,4034,4743,
#Deleted in new
chr16_KQ090026v1_alt	32204	37628	chr16_KQ090026v1_alt:32204-37628	1	-	32565	37562	789624	6	598,158,278,172,27,148,	0,1133,2853,3361,4101,5276,
#Deleted in new
chr16_KQ090026v1_alt	32204	37628	chr16_KQ090026v1_alt:32204-37628	3	-	32565	37562	789624	6	598,158,278,172,27,148,	0,1133,2853,3361,4101,5276,
#Deleted in new
chr16_KQ090026v1_alt	32568	35836	chr16_KQ090026v1_alt:32568-35836	1	-	32568	35836	789624	5	234,158,278,173,72,	0,769,2489,2997,3196,
#Deleted in new
chr16_KQ090026v1_alt	32568	37562	chr16_KQ090026v1_alt:32568-37562	1	-	32568	37562	789624	5	234,158,120,27,82,	0,769,3049,3737,4912,
#Deleted in new
chr16_KQ090026v1_alt	32568	35836	chr16_KQ090026v1_alt:32568-35836	1	-	32568	35836	789624	5	234,158,278,173,72,	0,769,2489,2997,3196,
#Deleted in new
chr16_KQ090026v1_alt	32568	37562	chr16_KQ090026v1_alt:32568-37562	1	-	32568	37562	789624	5	234,158,120,27,82,	0,769,3049,3737,4912,
#Deleted in new
chr16_KQ090026v1_alt	37355	39184	chr16_KQ090026v1_alt:37355-39184	3	+	37355	37355	8553170	3	36,90,139,	0,671,1690,
#Deleted in new
chr16_KQ090026v1_alt	51742	53013	chr16_KQ090026v1_alt:51742-53013	3	-	51742	51742	8553170	2	509,158,	0,1113,
#Deleted in new
chr16_KQ090027v1_alt	146291	148601	chr16_KQ090027v1_alt:146291-148601	1	-	146291	148601	789624	1	2310,	0,
#Deleted in new
chr16_KQ090027v1_alt	146291	148601	chr16_KQ090027v1_alt:146291-148601	3	-	146291	148601	789624	1	2310,	0,
#Deleted in new
chr16_KQ090027v1_alt	156662	157237	chr16_KQ090027v1_alt:156662-157237	7	+	156662	156662	16724991	2	120,453,	0,122,
#Deleted in new
chr16_KQ090027v1_alt	169036	170323	chr16_KQ090027v1_alt:169036-170323	3	+	169036	169036	8553170	2	213,221,	0,1066,
#Deleted in new
chr16_KQ090027v1_alt	226189	257933	chr16_KQ090027v1_alt:226189-257933	3	+	226269	253119	789624	9	174,77,90,81,57,78,56,72,688,	0,13460,16052,18974,24026,24674,25277,26884,31056,
#Deleted in new
chr16_KQ090027v1_alt	226192	257935	chr16_KQ090027v1_alt:226192-257935	1	+	226269	257362	789624	11	171,77,90,81,57,78,56,40,54,72,690,	0,13457,16049,18971,24023,24671,25274,25643,26087,26881,31053,
#Deleted in new
chr16_KQ090027v1_alt	226270	257323	chr16_KQ090027v1_alt:226270-257323	0	+	226270	257323	789624	10	93,77,90,81,57,78,56,40,54,78,	0,13379,15971,18893,23945,24593,25196,25565,26009,30975,
#Deleted in new
chr16_KQ090027v1_alt	239674	253133	chr16_KQ090027v1_alt:239674-253133	0	+	239674	253133	789624	8	52,81,57,78,50,40,54,60,	0,5489,10541,11189,11792,12161,12605,13399,
#Deleted in new
chr16_KQ090027v1_alt	252839	257363	chr16_KQ090027v1_alt:252839-257363	0	+	252839	252839	8553170	2	306,118,	0,4406,
#Deleted in new
chr16_KV880768v1_fix	18537	29668	chr16_KV880768v1_fix:18537-29668	3	+	18537	18537	8553170	4	62,156,122,233,	0,2666,2986,10898,
#Deleted in new
chr16_KV880768v1_fix	21140	35238	chr16_KV880768v1_fix:21140-35238	3	-	21170	35238	789624	19	173,84,84,97,136,190,98,92,188,127,182,97,165,45,153,95,84,89,62,	0,316,1329,2120,2293,3919,4256,4482,4654,5675,6580,6858,7970,8281,9388,12181,12659,13857,14036,
#Deleted in new
chr16_KV880768v1_fix	21142	38201	chr16_KV880768v1_fix:21142-38201	1	-	21170	35238	789624	20	171,84,84,97,136,190,125,92,188,127,182,97,165,45,153,95,84,89,261,284,	0,314,1327,2118,2291,3917,4254,4480,4652,5673,6578,6856,7968,8279,9386,12179,12657,13855,14034,16775,
#Deleted in new
chr16_KV880768v1_fix	25468	25980	chr16_KV880768v1_fix:25468-25980	0	-	25468	25468	8553170	2	53,358,	0,154,
#Deleted in new
chr16_KV880768v1_fix	27481	35265	chr16_KV880768v1_fix:27481-35265	0	-	27481	27481	8553170	9	421,97,165,45,153,95,84,89,89,	0,517,1629,1940,3047,5840,6318,7516,7695,
#Deleted in new
chr16_KV880768v1_fix	29256	35250	chr16_KV880768v1_fix:29256-35250	0	-	29256	29256	8553170	6	19,45,153,562,89,74,	0,165,1272,4065,5741,5920,
#Deleted in new
chr16_KV880768v1_fix	57355	77536	chr16_KV880768v1_fix:57355-77536	3	+	57428	74511	789624	2	237,4115,	0,16066,
#Deleted in new
chr16_KV880768v1_fix	62564	101966	chr16_KV880768v1_fix:62564-101966	0	-	92366	101942	8553170	10	72,77,85,122,184,138,102,63,154,194,	0,5118,22380,23163,28680,29673,30916,36658,38557,39208,
#Deleted in new
chr16_KV880768v1_fix	67562	85849	chr16_KV880768v1_fix:67562-85849	0	-	67730	85849	8553170	4	197,57,85,122,	0,14917,17382,18165,
#Deleted in new
chr16_KV880768v1_fix	82208	102651	chr16_KV880768v1_fix:82208-102651	3	-	82471	101942	0	9	328,85,122,184,102,63,154,255,107,	0,2736,3519,9036,11272,17014,18913,19564,20336,
#Deleted in new
chr16_KV880768v1_fix	82211	126743	chr16_KV880768v1_fix:82211-126743	1	-	82471	101942	0	10	325,85,122,184,102,63,154,255,107,74,	0,2733,3516,9033,11269,17011,18910,19561,20333,44458,
#Deleted in new
chr16_KV880768v1_fix	84773	86027	chr16_KV880768v1_fix:84773-86027	0	-	84773	84773	8553170	2	256,300,	0,954,
#Deleted in new
chr16_KV880768v1_fix	84974	126775	chr16_KV880768v1_fix:84974-126775	0	-	84974	101816	8553170	8	55,122,184,102,63,154,88,106,	0,753,6270,8506,14248,16147,16798,41695,
#Deleted in new
chr16_KV880768v1_fix	84982	101936	chr16_KV880768v1_fix:84982-101936	0	-	84982	84982	8553170	6	867,184,102,63,127,164,	0,6262,8498,14240,16139,16790,
#Deleted in new
chr16_KV880768v1_fix	93547	102216	chr16_KV880768v1_fix:93547-102216	0	-	93547	101942	8553170	4	35,63,154,444,	0,5675,7574,8225,
#Deleted in new
chr16_KV880768v1_fix	101865	107795	chr16_KV880768v1_fix:101865-107795	0	-	101865	101942	8553170	2	162,295,	0,5635,
#Deleted in new
chr16_KV880768v1_fix	102411	107403	chr16_KV880768v1_fix:102411-107403	0	-	102411	102411	8553170	2	240,205,	0,4787,
#Deleted in new
chr16_KV880768v1_fix	123593	124197	chr16_KV880768v1_fix:123593-124197	7	+	123593	123593	16724991	2	75,142,	0,462,
#Deleted in new
chr16_KV880768v1_fix	170819	175819	chr16_KV880768v1_fix:170819-175819	7	+	170819	170819	16724991	3	153,63,39,	0,2229,4961,
#Deleted in new
chr16_KV880768v1_fix	224757	224867	chr16_KV880768v1_fix:224757-224867	7	+	224757	224757	16724991	1	110,	0,
#Deleted in new
chr16_KV880768v1_fix	228051	242467	chr16_KV880768v1_fix:228051-242467	1	-	228051	242467	8553170	7	207,36,61,196,100,129,63,	0,1567,1712,5849,6157,9867,14353,
#Deleted in new
chr16_KV880768v1_fix	228051	242467	chr16_KV880768v1_fix:228051-242467	1	-	228051	242467	8553170	7	207,36,61,196,100,129,63,	0,1567,1712,5849,6157,9867,14353,
#Deleted in new
chr16_KV880768v1_fix	229733	247858	chr16_KV880768v1_fix:229733-247858	1	-	229733	247858	8553170	5	91,196,100,129,120,	0,4167,4475,8185,18005,
#Deleted in new
chr16_KV880768v1_fix	229733	247858	chr16_KV880768v1_fix:229733-247858	3	-	229733	247858	8553170	5	91,196,100,129,120,	0,4167,4475,8185,18005,
#Deleted in new
chr16_KV880768v1_fix	269442	630004	chr16_KV880768v1_fix:269442-630004	5	-	269442	269442	16724991	17	514,160,148,110,202,143,155,165,197,200,141,102,88,119,156,131,182,	0,1244,1778,2905,5898,6248,7404,352037,352370,352954,353705,354465,354656,355215,356466,356776,360380,
#Deleted in new
chr16_KV880768v1_fix	269836	667638	chr16_KV880768v1_fix:269836-667638	7	-	269836	269836	16724991	29	120,160,148,110,202,143,155,165,197,200,141,102,88,119,156,131,270,102,225,173,98,73,126,214,56,137,156,164,92,	0,850,1384,2511,5504,5854,7010,351643,351976,352560,353311,354071,354262,354821,356072,356382,359986,360978,363353,366005,367912,368931,369382,372864,374356,375707,379593,380333,397710,
#Deleted in new
chr16_KV880768v1_fix	270271	623076	chr16_KV880768v1_fix:270271-623076	4	-	270271	270271	16724991	8	575,148,110,202,143,155,530,680,	0,949,2076,5069,5419,6575,351208,352125,
#Deleted in new
chr16_KV880768v1_fix	278540	282897	chr16_KV880768v1_fix:278540-282897	1	-	278540	282897	8553170	8	92,200,141,102,88,119,156,56,	0,479,1230,1990,2181,2740,3991,4301,
#Deleted in new
chr16_KV880768v1_fix	278540	282897	chr16_KV880768v1_fix:278540-282897	3	-	278540	282897	8553170	8	92,200,141,102,88,119,156,56,	0,479,1230,1990,2181,2740,3991,4301,
#Deleted in new
chr16_KV880768v1_fix	295805	302325	chr16_KV880768v1_fix:295805-302325	1	-	295805	302325	789624	4	189,214,56,129,	0,3548,5040,6391,
#Deleted in new
chr16_KV880768v1_fix	295805	302325	chr16_KV880768v1_fix:295805-302325	3	-	295805	302325	789624	4	189,214,56,129,	0,3548,5040,6391,
#Deleted in new
chr16_KV880768v1_fix	360966	361274	chr16_KV880768v1_fix:360966-361274	7	+	360966	360966	16724991	1	308,	0,
#Deleted in new
chr16_KV880768v1_fix	491541	492482	chr16_KV880768v1_fix:491541-492482	3	+	491541	491541	8553170	2	30,345,	0,596,
#Deleted in new
chr16_KV880768v1_fix	492828	494494	chr16_KV880768v1_fix:492828-494494	3	+	492828	492828	8553170	1	1666,	0,
#Deleted in new
chr16_KV880768v1_fix	567452	567559	chr16_KV880768v1_fix:567452-567559	7	+	567452	567452	16724991	1	107,	0,
#Deleted in new
chr16_KV880768v1_fix	568654	591235	chr16_KV880768v1_fix:568654-591235	1	-	568654	591235	8553170	8	1407,1101,36,61,196,100,129,120,	0,1656,4117,4262,8403,8711,12428,22461,
#Deleted in new
chr16_KV880768v1_fix	568654	591235	chr16_KV880768v1_fix:568654-591235	3	-	568654	591235	789624	8	1407,1101,36,61,196,100,129,120,	0,1656,4117,4262,8403,8711,12428,22461,
#Deleted in new
chr16_KV880768v1_fix	626217	633405	chr16_KV880768v1_fix:626217-633405	4	-	626217	626217	16724991	4	132,270,102,216,	0,3605,4597,6972,
#Deleted in new
chr16_KV880768v1_fix	637750	667454	chr16_KV880768v1_fix:637750-667454	4	-	637750	637750	16724991	9	96,73,126,214,56,137,164,39,153,	0,1017,1468,4950,6442,7793,12419,15626,29551,
#Deleted in new
chr16_KV880768v1_fix	638418	653468	chr16_KV880768v1_fix:638418-653468	4	-	638418	638418	16724991	6	926,214,56,137,164,92,	0,4282,5774,7125,11751,14958,
#Deleted in new
chr16_KV880768v1_fix	644221	668031	chr16_KV880768v1_fix:644221-668031	5	-	644221	644221	16724991	5	27,137,164,39,485,	0,1322,5948,9155,23325,
#Deleted in new
chr16_KV880768v1_fix	667323	686367	chr16_KV880768v1_fix:667323-686367	7	+	667323	667323	16724991	7	711,131,185,109,153,154,1923,	0,1903,2904,4881,7767,11349,17121,
#Deleted in new
chr16_KV880768v1_fix	669226	675243	chr16_KV880768v1_fix:669226-675243	5	+	669226	669226	16724991	4	131,185,109,153,	0,1001,2978,5864,
#Deleted in new
chr16_KV880768v1_fix	697610	722603	chr16_KV880768v1_fix:697610-722603	7	-	697610	697610	16724991	5	120,84,159,762,165,	0,4652,7970,21362,24828,
#Deleted in new
chr16_KV880768v1_fix	726858	730152	chr16_KV880768v1_fix:726858-730152	3	-	726858	726858	789624	3	40,234,337,	0,2620,2957,
#Deleted in new
chr16_KV880768v1_fix	728765	730180	chr16_KV880768v1_fix:728765-730180	1	-	728765	728765	8553170	1	1415,	0,
#Deleted in new
chr16_KV880768v1_fix	735985	739912	chr16_KV880768v1_fix:735985-739912	3	-	735985	735985	8553170	3	233,121,69,	0,1881,3858,
#Deleted in new
chr16_KV880768v1_fix	755176	757557	chr16_KV880768v1_fix:755176-757557	1	+	755176	757557	8553170	3	155,165,349,	0,412,2032,
#Deleted in new
chr16_KV880768v1_fix	755176	757557	chr16_KV880768v1_fix:755176-757557	3	+	755176	757557	8553170	3	155,165,349,	0,412,2032,
#Deleted in new
chr16_KV880768v1_fix	769926	807621	chr16_KV880768v1_fix:769926-807621	1	-	771329	802061	789624	21	1460,126,78,518,62,158,60,82,121,92,45,86,120,50,108,83,116,78,51,74,129,	0,2917,6515,8824,9836,10442,10689,12171,16156,17896,18063,18416,19894,20974,21375,25594,26064,26879,29898,32099,37566,
#Deleted in new
chr16_KV880768v1_fix	769928	807655	chr16_KV880768v1_fix:769928-807655	3	-	771329	796862	789624	20	1458,126,78,518,62,158,60,82,121,92,45,86,120,50,108,83,116,78,51,163,	0,2915,6513,8822,9834,10440,10687,12169,16154,17894,18061,18414,19892,20972,21373,25592,26062,26877,29896,37564,
#Deleted in new
chr16_KV880768v1_fix	770588	773594	chr16_KV880768v1_fix:770588-773594	0	-	770588	770588	8553170	2	798,751,	0,2255,
#Deleted in new
chr16_KV880768v1_fix	770968	807603	chr16_KV880768v1_fix:770968-807603	1	-	771329	802061	789624	20	418,126,78,518,62,158,60,82,121,92,45,86,120,50,108,83,116,21,74,111,	0,1875,5473,7782,8794,9400,9647,11129,15114,16854,17021,17374,18852,19932,20333,24552,25022,25837,31057,36524,
#Deleted in new
chr16_KV880768v1_fix	771004	807597	chr16_KV880768v1_fix:771004-807597	1	-	771329	802061	789624	20	382,78,518,62,158,60,82,121,92,45,86,120,50,108,83,116,78,51,74,105,	0,5437,7746,8758,9364,9611,11093,15078,16818,16985,17338,18816,19896,20297,24516,24986,25801,28820,31021,36488,
#Deleted in new
chr16_KV880768v1_fix	771094	807619	chr16_KV880768v1_fix:771094-807619	1	-	771329	802061	789624	21	292,63,78,518,62,158,60,82,121,92,45,86,120,50,108,83,116,78,51,74,127,	0,1749,5347,7656,8668,9274,9521,11003,14988,16728,16895,17248,18726,19806,20207,24426,24896,25711,28730,30931,36398,
#Deleted in new
chr16_KV880768v1_fix	771094	802076	chr16_KV880768v1_fix:771094-802076	0	-	795555	802061	8553170	20	292,126,78,518,62,158,60,82,121,92,45,86,120,50,108,83,66,78,51,51,	0,1749,5347,7656,8668,9274,9521,11003,14988,16728,16895,17248,18726,19806,20207,24426,24896,25711,28730,30931,
#Deleted in new
chr16_KV880768v1_fix	771333	776710	chr16_KV880768v1_fix:771333-776710	0	-	771333	771333	8553170	3	53,126,269,	0,1510,5108,
#Deleted in new
chr16_KV880768v1_fix	775937	807575	chr16_KV880768v1_fix:775937-807575	0	-	775937	775937	8553170	18	3331,62,158,60,82,121,92,45,86,120,50,108,83,116,78,51,74,83,	0,3825,4431,4678,6160,10145,11885,12052,12405,13883,14963,15364,19583,20053,20868,23887,26088,31555,
#Deleted in new
chr16_KV880768v1_fix	779669	788048	chr16_KV880768v1_fix:779669-788048	0	-	779669	779669	8553170	7	155,158,60,82,121,92,59,	0,699,946,2428,6413,8153,8320,
#Deleted in new
chr16_KV880768v1_fix	782156	790115	chr16_KV880768v1_fix:782156-790115	0	-	782156	788024	8553170	6	23,121,92,45,86,295,	0,3926,5666,5833,6186,7664,
#Deleted in new
chr16_KV880768v1_fix	786183	796069	chr16_KV880768v1_fix:786183-796069	0	-	791342	796069	8553170	9	20,92,45,86,120,50,70,83,79,	0,1639,1806,2159,3637,4717,5118,9337,9807,
#Deleted in new
chr16_KV880768v1_fix	791368	807596	chr16_KV880768v1_fix:791368-807596	0	-	791368	796862	8553170	6	41,83,116,78,51,104,	0,4152,4622,5437,8456,16124,
#Deleted in new
chr16_KV880768v1_fix	791374	807610	chr16_KV880768v1_fix:791374-807610	0	-	791374	806047	8553170	7	35,83,116,78,51,84,118,	0,4146,4616,5431,8450,14619,16118,
#Deleted in new
chr16_KV880768v1_fix	794709	802560	chr16_KV880768v1_fix:794709-802560	0	-	794709	794709	8553170	4	1397,78,51,535,	0,2096,5115,7316,
#Deleted in new
chr16_KV880768v1_fix	795085	802056	chr16_KV880768v1_fix:795085-802056	0	-	795085	795085	8553170	6	95,78,116,78,51,31,	0,440,905,1720,4739,6940,
#Deleted in new
chr16_KV880768v1_fix	795554	807600	chr16_KV880768v1_fix:795554-807600	0	-	795554	802061	8553170	7	49,116,78,51,74,84,108,	0,436,1251,4270,6471,10439,11938,
#Deleted in new
chr16_KV880768v1_fix	795567	807596	chr16_KV880768v1_fix:795567-807596	0	-	799550	802061	8553170	7	36,116,78,116,51,74,104,	0,423,1238,3969,4257,6458,11925,
#Deleted in new
chr16_KV880768v1_fix	796549	802224	chr16_KV880768v1_fix:796549-802224	0	-	796549	796549	8553170	3	334,51,199,	0,3275,5476,
#Deleted in new
chr16_KV880768v1_fix	816304	898768	chr16_KV880768v1_fix:816304-898768	1	-	821052	879315	789624	18	4858,179,125,189,135,63,78,68,202,128,133,150,172,38,61,101,322,409,	0,8367,14993,21867,22219,23863,25556,28212,30046,30971,31356,31844,37419,38050,39926,44011,62765,82055,
#Deleted in new
chr16_KV880768v1_fix	816304	898768	chr16_KV880768v1_fix:816304-898768	3	-	821052	879315	8553170	18	4858,179,125,189,135,63,78,68,202,128,133,150,172,38,61,101,322,409,	0,8367,14993,21867,22219,23863,25556,28212,30046,30971,31356,31844,37419,38050,39926,44011,62765,82055,
#Deleted in new
chr16_KV880768v1_fix	816311	818341	chr16_KV880768v1_fix:816311-818341	3	+	816311	816311	8553170	2	303,366,	0,1664,
#Deleted in new
chr16_KV880768v1_fix	816313	818136	chr16_KV880768v1_fix:816313-818136	0	+	816313	816313	8553170	2	306,161,	0,1662,
#Deleted in new
chr16_KV880768v1_fix	816317	818107	chr16_KV880768v1_fix:816317-818107	0	+	816317	816317	8553170	2	342,132,	0,1658,
#Deleted in new
chr16_KV880768v1_fix	913284	939455	chr16_KV880768v1_fix:913284-939455	3	-	914645	939455	789624	12	1616,74,64,66,138,83,76,119,58,96,185,55,	0,4960,7510,9477,10098,13542,19423,20803,22252,24754,25319,26116,
#Deleted in new
chr16_KV880768v1_fix	948071	1012496	chr16_KV880768v1_fix:948071-1012496	3	-	949135	1012400	789624	34	935,66,98,124,152,145,145,109,138,98,111,91,153,71,196,145,75,120,95,81,104,136,126,66,109,126,107,99,55,78,125,124,87,110,	0,1050,1302,4332,6120,7035,8660,10622,12582,14201,15274,16722,18454,22528,23871,25237,25687,30669,33259,33801,35349,35863,37939,39790,40099,41498,45972,47386,53437,56473,56648,59271,60021,64315,
#Deleted in new
chr16_KV880768v1_fix	948937	984014	chr16_KV880768v1_fix:948937-984014	0	-	963426	984014	8553170	23	69,66,98,124,152,145,145,109,138,98,111,47,91,153,71,196,145,75,120,95,81,104,80,	0,184,436,3466,5254,6169,7794,9756,11716,13335,14408,14851,15856,17588,21662,23005,24371,24821,29803,32393,32935,34483,34997,
#Deleted in new
chr16_KV880768v1_fix	949135	958766	chr16_KV880768v1_fix:949135-958766	1	-	949135	958766	8553170	8	52,98,124,152,145,145,72,73,	0,238,3268,5056,5971,7596,8260,9558,
#Deleted in new
chr16_KV880768v1_fix	966485	973326	chr16_KV880768v1_fix:966485-973326	0	-	966519	973326	8553170	4	193,71,196,18,	0,4114,5457,6823,
#Deleted in new
chr16_KV880768v1_fix	966612	1012497	chr16_KV880768v1_fix:966612-1012497	0	-	966612	966612	8553170	20	66,71,312,145,75,120,95,81,104,126,66,109,126,107,99,55,300,124,87,111,	0,3987,5330,6696,7146,12128,14718,15260,16808,19398,21249,21558,22957,27431,28845,34896,37932,40730,41480,45774,
#Deleted in new
chr16_KV880768v1_fix	966640	1012496	chr16_KV880768v1_fix:966640-1012496	0	-	966640	1012400	8553170	23	38,71,196,145,75,120,95,63,81,104,136,126,66,109,126,107,99,55,78,125,124,87,110,	0,3959,5302,6668,7118,12100,14690,14861,15232,16780,17294,19370,21221,21530,22929,27403,28817,34868,37904,38079,40702,41452,45746,
#Deleted in new
chr16_KV880768v1_fix	994058	1012498	chr16_KV880768v1_fix:994058-1012498	0	-	994058	995460	8553170	6	92,99,78,125,87,112,	0,1399,10486,10661,14034,18328,
#Deleted in new
chr16_KV880768v1_fix	994125	1012500	chr16_KV880768v1_fix:994125-1012500	0	-	994125	994125	8553170	5	25,55,300,87,114,	0,7383,10419,13967,18261,
#Deleted in new
chr16_KV880768v1_fix	1012806	1018051	chr16_KV880768v1_fix:1012806-1018051	3	+	1012806	1012806	8553170	3	24,226,265,	0,1983,4980,
#Deleted in new
chr16_KV880768v1_fix	1014873	1021782	chr16_KV880768v1_fix:1014873-1021782	0	+	1014873	1014873	8553170	2	142,243,	0,6666,
#Deleted in new
chr16_KV880768v1_fix	1017503	1096829	chr16_KV880768v1_fix:1017503-1096829	0	-	1040690	1096736	789624	7	478,107,68,193,213,101,199,	0,1784,2259,3666,11835,23097,79127,
#Deleted in new
chr16_KV880768v1_fix	1017503	1019907	chr16_KV880768v1_fix:1017503-1019907	0	-	1017503	1017503	8553170	3	478,107,145,	0,1784,2259,
#Deleted in new
chr16_KV880768v1_fix	1017504	1096829	chr16_KV880768v1_fix:1017504-1096829	3	-	1021336	1096736	8553170	6	477,107,68,193,213,199,	0,1783,2258,3665,11834,79126,
#Deleted in new
chr16_KV880768v1_fix	1017931	1019239	chr16_KV880768v1_fix:1017931-1019239	1	+	1017931	1017931	8553170	2	9,396,	0,912,
#Deleted in new
chr16_KV880768v1_fix	1020394	1096829	chr16_KV880768v1_fix:1020394-1096829	1	-	1024157	1096736	789624	3	3948,213,199,	0,8944,76236,
#Deleted in new
chr16_KV880768v1_fix	1024240	1096727	chr16_KV880768v1_fix:1024240-1096727	0	-	1029721	1096727	8553170	3	102,406,97,	0,5098,72390,
#Deleted in new
chr16_KV880768v1_fix	1028659	1097400	chr16_KV880768v1_fix:1028659-1097400	1	-	1029330	1097393	8553170	2	892,59,	0,68682,
#Deleted in new
chr16_KV880768v1_fix	1028981	1096755	chr16_KV880768v1_fix:1028981-1096755	1	-	1029330	1096736	8553170	2	570,125,	0,67649,
#Deleted in new
chr16_KV880768v1_fix	1096975	1097558	chr16_KV880768v1_fix:1096975-1097558	3	+	1096975	1096975	8553170	1	583,	0,
#Deleted in new
chr16_KV880768v1_fix	1103928	1121173	chr16_KV880768v1_fix:1103928-1121173	0	+	1103991	1116257	789624	5	94,180,71,190,796,	0,4609,5802,12317,16449,
#Deleted in new
chr16_KV880768v1_fix	1103928	1121173	chr16_KV880768v1_fix:1103928-1121173	3	+	1103991	1120771	789624	4	94,180,190,796,	0,4609,12317,16449,
#Deleted in new
chr16_KV880768v1_fix	1103940	1121173	chr16_KV880768v1_fix:1103940-1121173	1	+	1103991	1120771	789624	3	82,190,796,	0,12305,16437,
#Deleted in new
chr16_KV880768v1_fix	1105382	1106729	chr16_KV880768v1_fix:1105382-1106729	7	-	1105382	1105382	16724991	2	829,105,	0,1242,
#Deleted in new
chr16_KV880768v1_fix	1121377	1152379	chr16_KV880768v1_fix:1121377-1152379	3	-	1121866	1151615	0	14	573,154,77,81,200,96,58,98,125,57,65,150,84,797,	0,2960,7415,9682,11536,12038,14973,18153,20773,21142,25061,26094,26342,30205,
#Deleted in new
chr16_KV880768v1_fix	1121690	1124776	chr16_KV880768v1_fix:1121690-1124776	0	-	1121690	1121690	8553170	2	260,439,	0,2647,
#Deleted in new
chr16_KV880768v1_fix	1121701	1151652	chr16_KV880768v1_fix:1121701-1151652	0	-	1124446	1151615	8553170	12	249,154,200,96,58,98,125,57,65,150,84,70,	0,2636,11212,11714,14649,17829,20449,20818,24737,25770,26018,29881,
#Deleted in new
chr16_KV880768v1_fix	1121712	1151668	chr16_KV880768v1_fix:1121712-1151668	1	-	1121835	1151615	8553170	13	238,77,81,200,96,58,98,125,57,65,150,84,86,	0,7080,9347,11201,11703,14638,17818,20438,20807,24726,25759,26007,29870,
#Deleted in new
chr16_KV880768v1_fix	1128088	1142844	chr16_KV880768v1_fix:1128088-1142844	0	-	1128088	1128088	8553170	7	781,81,200,96,58,98,694,	0,2971,4825,5327,8262,11442,14062,
#Deleted in new
chr16_KV880768v1_fix	1131078	1136574	chr16_KV880768v1_fix:1131078-1136574	0	-	1131078	1131078	8553170	4	62,200,96,224,	0,1835,2337,5272,
#Deleted in new
chr16_KV880768v1_fix	1139502	1143576	chr16_KV880768v1_fix:1139502-1143576	0	-	1139502	1139502	8553170	4	126,125,57,4,	0,2648,3017,4070,
#Deleted in new
chr16_KV880768v1_fix	1139530	1151652	chr16_KV880768v1_fix:1139530-1151652	0	-	1139530	1151615	8553170	6	98,125,57,65,150,70,	0,2620,2989,6908,7941,12052,
#Deleted in new
chr16_KV880768v1_fix	1141823	1151668	chr16_KV880768v1_fix:1141823-1151668	0	-	1141823	1141823	8553170	2	452,86,	0,9759,
#Deleted in new
chr16_KV880768v1_fix	1142216	1151741	chr16_KV880768v1_fix:1142216-1151741	0	-	1145632	1151615	8553170	8	59,57,138,217,65,150,84,159,	0,303,1356,3266,4222,5255,5503,9366,
#Deleted in new
chr16_KV880768v1_fix	1142525	1151636	chr16_KV880768v1_fix:1142525-1151636	0	-	1143691	1151615	8553170	6	51,138,65,150,84,54,	0,1047,3913,4946,5194,9057,
#Deleted in new
chr16_KV880768v1_fix	1145257	1147550	chr16_KV880768v1_fix:1145257-1147550	0	-	1145632	1147550	8553170	3	442,65,79,	0,1181,2214,
#Deleted in new
chr16_KV880768v1_fix	1145632	1151751	chr16_KV880768v1_fix:1145632-1151751	1	-	1145632	1151615	8553170	5	67,65,150,84,169,	0,806,1839,2087,5950,
#Deleted in new
chr16_KV880768v1_fix	1153330	1154821	chr16_KV880768v1_fix:1153330-1154821	3	+	1153330	1153330	8553170	1	1491,	0,
#Deleted in new
chr16_KV880768v1_fix	1160052	1165284	chr16_KV880768v1_fix:1160052-1165284	5	-	1160052	1160052	16724991	3	125,182,97,	0,4529,5135,
#Deleted in new
chr16_KV880768v1_fix	1160081	1166175	chr16_KV880768v1_fix:1160081-1166175	7	-	1160081	1160081	16724991	4	96,182,171,188,	0,4500,5106,5906,
#Deleted in new
chr16_KV880768v1_fix	1185881	1200919	chr16_KV880768v1_fix:1185881-1200919	5	+	1185881	1185881	16724991	6	92,164,137,56,214,926,	0,3132,7785,9217,10551,14112,
#Deleted in new
chr16_KV880768v1_fix	1189013	1225700	chr16_KV880768v1_fix:1189013-1225700	7	+	1189013	1189013	16724991	28	164,156,137,56,214,126,73,98,173,225,102,270,131,156,119,88,102,141,200,197,165,155,143,202,110,148,160,120,	0,748,4653,6085,7419,10980,11484,12478,14310,16913,19408,20232,23992,24277,25142,25734,25911,26632,27324,27911,28276,29540,30708,30999,34073,35155,35677,36567,
#Deleted in new
chr16_KV880768v1_fix	1193665	1203486	chr16_KV880768v1_fix:1193665-1203486	4	+	1193665	1193665	16724991	7	138,56,214,126,73,98,163,	0,1433,2767,6328,6832,7826,9658,
#Deleted in new
chr16_KV880768v1_fix	1215750	1220084	chr16_KV880768v1_fix:1215750-1220084	4	+	1215750	1215750	16724991	7	36,200,197,165,155,143,72,	0,587,1174,1539,2803,3971,4262,
#Deleted in new
chr16_KV880768v1_fix	1215857	1225265	chr16_KV880768v1_fix:1215857-1225265	4	+	1215857	1215857	16724991	8	680,530,155,143,202,110,148,575,	0,1067,2696,3864,4155,7229,8311,8833,
#Deleted in new
chr16_KV880768v1_fix	1222810	1224283	chr16_KV880768v1_fix:1222810-1224283	4	+	1222810	1222810	16724991	2	386,115,	0,1358,
#Deleted in new
chr16_KV880768v1_fix	1247659	1270054	chr16_KV880768v1_fix:1247659-1270054	1	+	1247659	1270054	789624	8	120,129,100,196,61,36,1825,695,	0,9827,13574,13786,18057,18227,19623,21700,
#Deleted in new
chr16_KV880768v1_fix	1247659	1270054	chr16_KV880768v1_fix:1247659-1270054	3	+	1247659	1270054	8553170	8	120,129,100,196,61,36,1825,695,	0,9827,13574,13786,18057,18227,19623,21700,
#Deleted in new
chr16_KV880768v1_fix	1271153	1271259	chr16_KV880768v1_fix:1271153-1271259	7	-	1271153	1271153	16724991	1	106,	0,
#Deleted in new
chr16_KV880768v1_fix	1309020	1310685	chr16_KV880768v1_fix:1309020-1310685	3	+	1309020	1309020	8553170	1	1665,	0,
#Deleted in new
chr16_KV880768v1_fix	1344242	1383395	chr16_KV880768v1_fix:1344242-1383395	1	-	1344242	1383395	8553170	12	68,196,98,137,143,156,188,130,94,191,136,95,	0,3260,7418,8037,8473,15517,19645,24173,29633,32133,33906,39058,
#Deleted in new
chr16_KV880768v1_fix	1344242	1383395	chr16_KV880768v1_fix:1344242-1383395	3	-	1344242	1383395	8553170	12	68,196,98,137,143,156,188,130,94,191,136,95,	0,3260,7418,8037,8473,15517,19645,24173,29633,32133,33906,39058,
#Deleted in new
chr16_KV880768v1_fix	1447354	1505023	chr16_KV880768v1_fix:1447354-1505023	1	-	1449395	1505023	8553170	6	2247,185,210,191,16,41,	0,32357,39429,44652,57564,57628,
#Deleted in new
chr16_KV880768v1_fix	1447354	1505341	chr16_KV880768v1_fix:1447354-1505341	3	-	1449395	1505083	789624	5	2247,185,210,191,423,	0,32357,39429,44652,57564,
#Deleted in new
chr16_KV880768v1_fix	1447356	1452959	chr16_KV880768v1_fix:1447356-1452959	0	-	1447356	1447356	8553170	1	5603,	0,
#Deleted in new
chr16_KV880768v1_fix	1448708	1505259	chr16_KV880768v1_fix:1448708-1505259	1	-	1449395	1505083	789624	5	890,185,210,191,341,	0,31003,38075,43298,56210,
#Deleted in new
chr16_KV880768v1_fix	1449503	1507595	chr16_KV880768v1_fix:1449503-1507595	0	-	1449503	1507561	789624	5	98,185,210,191,79,	0,30208,37280,42503,58013,
#Deleted in new
chr16_KV880768v1_fix	1449546	1492142	chr16_KV880768v1_fix:1449546-1492142	0	-	1449546	1492142	8553170	3	55,185,136,	0,30165,42460,
#Deleted in new
chr16_KV880768v1_fix	1452167	1465291	chr16_KV880768v1_fix:1452167-1465291	3	+	1452229	1463294	789624	6	129,360,107,51,81,2057,	0,5168,8264,9062,9506,11067,
#Deleted in new
chr16_KV880768v1_fix	1452219	1458442	chr16_KV880768v1_fix:1452219-1458442	0	+	1452219	1452219	8553170	2	77,1107,	0,5116,
#Deleted in new
chr16_KV880768v1_fix	1452221	1460538	chr16_KV880768v1_fix:1452221-1460538	0	+	1452229	1460538	8553170	3	75,186,107,	0,5114,8210,
#Deleted in new
chr16_KV880768v1_fix	1462427	1462534	chr16_KV880768v1_fix:1462427-1462534	3	-	1462427	1462427	8553170	1	107,	0,
#Deleted in new
chr16_KV880768v1_fix	1462667	1462774	chr16_KV880768v1_fix:1462667-1462774	3	-	1462667	1462667	8553170	1	107,	0,
#Deleted in new
chr16_KV880768v1_fix	1477257	1478085	chr16_KV880768v1_fix:1477257-1478085	3	-	1477257	1477257	8553170	1	828,	0,
#Deleted in new
chr16_KV880768v1_fix	1479593	1486960	chr16_KV880768v1_fix:1479593-1486960	0	-	1479688	1486960	8553170	2	303,177,	0,7190,
#Deleted in new
chr16_KV880768v1_fix	1479711	1492742	chr16_KV880768v1_fix:1479711-1492742	0	-	1479711	1492029	8553170	4	185,210,191,199,	0,7072,12295,12832,
#Deleted in new
chr16_KV880768v1_fix	1479712	1505225	chr16_KV880768v1_fix:1479712-1505225	0	-	1486933	1505083	8553170	3	184,210,307,	0,7071,25206,
#Deleted in new
chr16_KV880768v1_fix	1486848	1505099	chr16_KV880768v1_fix:1486848-1505099	0	-	1492106	1505083	8553170	3	145,191,111,	0,5158,18140,
#Deleted in new
chr16_KV880768v1_fix	1506809	1507599	chr16_KV880768v1_fix:1506809-1507599	0	-	1506809	1506809	8553170	2	21,83,	0,707,
#Deleted in new
chr16_KV880768v1_fix	1516952	1517190	chr16_KV880768v1_fix:1516952-1517190	3	-	1516952	1516952	8553170	1	238,	0,
#Deleted in new
chr16_KV880768v1_fix	1584451	1584987	chr16_KV880768v1_fix:1584451-1584987	7	+	1584451	1584451	16724991	1	536,	0,
#Deleted in new
chr16_KV880768v1_fix	1598677	1598764	chr16_KV880768v1_fix:1598677-1598764	3	+	1598677	1598677	5263520	1	87,	0,
#Deleted in new
chr16_KV880768v1_fix	1625245	1631738	chr16_KV880768v1_fix:1625245-1631738	1	+	1625245	1631738	8553170	4	129,56,214,189,	0,1424,2758,6304,
#Deleted in new
chr16_KV880768v1_fix	1625245	1631738	chr16_KV880768v1_fix:1625245-1631738	3	+	1625245	1631738	8553170	4	129,56,214,189,	0,1424,2758,6304,
#Deleted in new
chr16_KV880768v1_fix	1644637	1649002	chr16_KV880768v1_fix:1644637-1649002	1	+	1644637	1649002	8553170	8	56,156,119,88,102,141,200,92,	0,210,1506,2096,2273,2994,3686,4273,
#Deleted in new
chr16_KV880768v1_fix	1644637	1649002	chr16_KV880768v1_fix:1644637-1649002	3	+	1644637	1649002	8553170	8	56,156,119,88,102,141,200,92,	0,210,1506,2096,2273,2994,3686,4273,
#Deleted in new
chr16_KV880768v1_fix	1679673	1702604	chr16_KV880768v1_fix:1679673-1702604	1	+	1679673	1702604	8553170	9	120,129,100,196,61,36,934,1002,569,	0,9991,13742,13954,18230,18400,19796,20982,22362,
#Deleted in new
chr16_KV880768v1_fix	1679673	1702604	chr16_KV880768v1_fix:1679673-1702604	1	+	1679673	1702604	8553170	9	120,129,100,196,61,36,934,1002,569,	0,9991,13742,13954,18230,18400,19796,20982,22362,
#Deleted in new
chr16_KV880768v1_fix	1679673	1702604	chr16_KV880768v1_fix:1679673-1702604	1	+	1679673	1702604	8553170	8	120,129,100,196,61,36,499,29,	0,9991,13742,13954,18230,18400,19796,22902,
#Deleted in new
chr16_KV880768v1_fix	1679673	1702604	chr16_KV880768v1_fix:1679673-1702604	3	+	1679673	1702604	8553170	8	120,129,100,196,61,36,499,29,	0,9991,13742,13954,18230,18400,19796,22902,
#Deleted in new
chr16_KZ208921v1_alt	22676	23431	chr16_KZ208921v1_alt:22676-23431	7	-	22676	22676	16724991	2	444,309,	0,446,
#Deleted in new
chr16_KZ208921v1_alt	34366	40139	chr16_KZ208921v1_alt:34366-40139	1	-	34366	40139	789624	7	159,134,181,79,80,104,52,	0,609,1169,1578,1749,1926,5721,
#Deleted in new
chr16_KZ208921v1_alt	34366	40139	chr16_KZ208921v1_alt:34366-40139	3	-	34366	40139	789624	7	159,134,181,79,80,104,52,	0,609,1169,1578,1749,1926,5721,
#Deleted in new
chr16_KZ208921v1_alt	52017	55075	chr16_KZ208921v1_alt:52017-55075	1	+	52017	55075	789624	7	52,104,80,79,181,134,159,	0,948,1149,1321,1628,2249,2899,
#Deleted in new
chr16_KZ208921v1_alt	52017	55075	chr16_KZ208921v1_alt:52017-55075	3	+	52017	55075	789624	7	52,104,80,79,181,134,159,	0,948,1149,1321,1628,2249,2899,
#Deleted in new
chr16_KZ208921v1_alt	56289	58413	chr16_KZ208921v1_alt:56289-58413	7	+	56289	56289	16724991	4	652,178,216,208,	0,746,1017,1916,
#Deleted in new
chr16_KZ208921v1_alt	56556	58331	chr16_KZ208921v1_alt:56556-58331	5	+	56556	56556	16724991	4	52,79,81,126,	0,306,807,1649,
#Deleted in new
chr16_KZ208921v1_alt	56597	58410	chr16_KZ208921v1_alt:56597-58410	4	+	56597	56597	16724991	5	21,233,178,216,205,	0,111,438,709,1608,
#Deleted in new
chr16_KZ208921v1_alt	56732	57522	chr16_KZ208921v1_alt:56732-57522	4	+	56732	56732	16724991	2	481,216,	0,574,
#Deleted in new
chr16_KZ208921v1_alt	57201	58411	chr16_KZ208921v1_alt:57201-58411	4	+	57201	57201	16724991	2	321,206,	0,1004,
#Deleted in new
chr16_KZ559113v1_fix	83555	86310	chr16_KZ559113v1_fix:83555-86310	3	-	83555	83555	8553170	1	2755,	0,
#Deleted in new
chr16_KZ559113v1_fix	95611	96188	chr16_KZ559113v1_fix:95611-96188	7	-	95611	95611	16724991	2	191,306,	0,271,
#Deleted in new
chr16_KZ559113v1_fix	97462	97682	chr16_KZ559113v1_fix:97462-97682	7	-	97462	97462	16724991	1	220,	0,
#Deleted in new
chr16_KZ559113v1_fix	103029	472142	chr16_KZ559113v1_fix:103029-472142	3	-	109955	472057	0	12	7249,334,196,263,177,217,81,203,173,511,39,448,	0,15877,25897,32704,36586,39384,57060,96443,98713,157219,256243,368665,
#Deleted in new
chr16_KZ559113v1_fix	135764	139997	chr16_KZ559113v1_fix:135764-139997	3	+	135764	135764	8553170	3	47,99,495,	0,3012,3738,
#Deleted in new
chr16_KZ559113v1_fix	194123	195493	chr16_KZ559113v1_fix:194123-195493	3	-	194123	194123	8553170	1	1370,	0,
#Deleted in new
chr16_KZ559113v1_fix	199291	260289	chr16_KZ559113v1_fix:199291-260289	0	-	199291	199291	8553170	3	384,173,41,	0,2451,60957,
#Deleted in new
chr16_KZ559113v1_fix	228283	229261	chr16_KZ559113v1_fix:228283-229261	3	-	228283	228283	8553170	1	978,	0,
#Deleted in new
chr16_KZ559113v1_fix	250934	252656	chr16_KZ559113v1_fix:250934-252656	3	-	250934	250934	8553170	1	1722,	0,
#Deleted in new
chr16_KZ559113v1_fix	355932	404762	chr16_KZ559113v1_fix:355932-404762	0	-	355932	355932	8553170	3	744,39,56,	0,3340,48774,
#Deleted in new
chr16_KZ559113v1_fix	356488	370986	chr16_KZ559113v1_fix:356488-370986	0	-	356488	356488	8553170	3	188,39,132,	0,2784,14366,
#Deleted in new
chr16_KZ559113v1_fix	447085	447641	chr16_KZ559113v1_fix:447085-447641	3	-	447085	447085	8553170	1	556,	0,
#Deleted in new
chr16_KZ559113v1_fix	454730	457497	chr16_KZ559113v1_fix:454730-457497	3	+	454730	454730	8553170	2	620,565,	0,2202,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	64098	76866	chr17:64098-76866	3	-	64098	64098	8553170	5	1638,58,191,65,144,	0,1731,7267,11715,12624,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	88640	118578	chr17:88640-118578	3	-	88640	88640	8553170	8	65,529,59,66,216,132,110,196,	0,8628,10252,12468,13417,16919,18114,29742,
#Deleted in new
chr17	90795	90899	chr17:90795-90899	3	-	90795	90795	8553170	1	104,	0,
#Deleted in new
chr17	137525	139067	chr17:137525-139067	3	+	137590	138942	789624	3	120,200,158,	0,677,1384,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	142788	181636	chr17:142788-181636	3	-	147440	181479	789624	9	4789,97,82,158,127,110,75,80,530,	0,5384,6322,13431,18626,19292,21341,29748,38318,
#Partially deleted in new
chr17	156018	162172	chr17:156018-162172	0	-	156018	156018	8553170	3	359,127,92,	0,5396,6062,
#Partially deleted in new
chr17	163539	181170	chr17:163539-181170	0	-	163539	163539	8553170	4	199,75,80,64,	0,590,8997,17567,
#Partially deleted in new
chr17	183823	191587	chr17:183823-191587	3	-	183823	183823	8553170	3	635,162,388,	0,3272,7376,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	212388	352842	chr17:212388-352842	3	-	213851	327543	789624	9	1535,149,114,175,87,130,144,113,131,	0,3265,7234,34722,69379,107031,108883,115078,140323,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	212501	353097	chr17:212501-353097	1	-	213851	327543	789624	9	1422,149,114,175,130,144,113,176,386,	0,3152,7121,34609,106918,108770,114965,121257,140210,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	212501	352807	chr17:212501-352807	1	-	213851	327543	789624	10	1422,149,114,175,87,130,144,113,176,96,	0,3152,7121,34609,69266,106918,108770,114965,121257,140210,
#Partially deleted in new
chr17	213323	215933	chr17:213323-215933	0	-	213323	213323	8553170	2	600,280,	0,2330,
#Partially deleted in new
chr17	213644	352842	chr17:213644-352842	1	-	213851	327543	789624	8	279,149,114,175,130,144,113,131,	0,2009,5978,33466,105775,107627,113822,139067,
#Partially deleted in new
chr17	213803	234585	chr17:213803-234585	0	-	213803	213803	8553170	4	120,149,114,186,	0,1850,5819,20596,
#Partially deleted in new
chr17	213823	247687	chr17:213823-247687	0	-	213823	213823	8553170	5	100,149,114,175,56,	0,1830,5799,33287,33808,
#Partially deleted in new
chr17	219696	306681	chr17:219696-306681	0	-	219696	219696	8553170	4	40,175,87,266,	0,27414,62071,86719,
#Partially deleted in new
chr17	247119	339045	chr17:247119-339045	0	-	247119	327543	789624	6	166,87,130,144,113,180,	0,34648,72300,74152,80347,91746,
#Partially deleted in new
chr17	247143	352790	chr17:247143-352790	0	-	247143	327543	789624	6	142,87,130,144,113,198,	0,34624,72276,74128,80323,105449,
#Partially deleted in new
chr17	247190	331027	chr17:247190-331027	0	-	247190	327543	789624	5	95,130,144,113,104,	0,72229,74081,80276,83733,
#Partially deleted in new
chr17	247266	339111	chr17:247266-339111	0	-	247266	327543	789624	6	19,87,130,144,113,44,	0,34501,72153,74005,80200,91801,
#Partially deleted in new
chr17	261688	327531	chr17:261688-327531	0	-	261906	327531	789624	5	266,87,130,144,65,	0,20079,57731,59583,65778,
#Partially deleted in new
chr17	281768	386254	chr17:281768-386254	0	-	281768	327543	789624	5	86,130,144,113,58,	0,37651,39503,45698,104428,
#Partially deleted in new
chr17	281827	339659	chr17:281827-339659	0	-	281827	327543	789624	5	27,130,144,113,152,	0,37592,39444,45639,57680,
#Partially deleted in new
chr17	319440	386233	chr17:319440-386233	0	-	319440	327543	789624	5	109,144,113,176,37,	0,1831,8026,14318,66756,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	319506	341423	chr17:319506-341423	0	-	319506	327543	789624	4	43,144,113,271,	0,1765,7960,21646,
#Partially deleted in new
chr17	319521	334066	chr17:319521-334066	0	-	319521	327543	789624	4	28,144,113,308,	0,1750,7945,14237,
#Partially deleted in new
chr17	321379	338873	chr17:321379-338873	0	-	321379	327543	789624	3	36,113,338,	0,6087,17156,
#Deleted in new
chr17	321391	322453	chr17:321391-322453	3	+	321391	321391	8553170	2	219,192,	0,870,
#Deleted in new
chr17	321516	322453	chr17:321516-322453	0	+	321516	321516	8553170	2	115,192,	0,745,
#Deleted in new
chr17	331204	333488	chr17:331204-333488	3	+	331204	331204	789624	3	513,67,433,	0,595,1851,
#Deleted in new
chr17	331204	333485	chr17:331204-333485	0	+	331204	331204	8553170	3	517,67,430,	0,595,1851,
#Deleted in new
chr17	331233	333485	chr17:331233-333485	0	+	331233	331233	8553170	1	2252,	0,
#Deleted in new
chr17	331514	332151	chr17:331514-332151	0	+	331514	331514	8553170	2	203,352,	0,285,
#Deleted in new
chr17	332141	333444	chr17:332141-333444	1	+	332141	332141	8553170	2	114,389,	0,914,
#Deleted in new
chr17	333205	336022	chr17:333205-336022	0	-	333205	333205	8553170	3	109,176,248,	0,553,2569,
#Partially deleted in new
chr17	348909	352801	chr17:348909-352801	0	-	348909	348909	8553170	3	188,156,90,	0,310,3802,
#Partially deleted in new
chr17	352637	357581	chr17:352637-357581	3	+	352637	352637	8553170	2	225,523,	0,4421,
#Partially deleted in new
chr17	354736	356882	chr17:354736-356882	3	+	354736	354736	8553170	2	733,180,	0,1966,
#Partially deleted in new
chr17	404467	413383	chr17:404467-413383	0	-	404467	404467	8553170	2	158,255,	0,8661,
#Partially deleted in new
chr17	404534	414023	chr17:404534-414023	0	-	404534	404534	789624	3	58,285,45,	0,8594,9444,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	404540	410031	chr17:404540-410031	3	-	404540	404540	8553170	2	52,835,	0,4656,
#Partially deleted in new
chr17	410326	414666	chr17:410326-414666	3	+	410342	414115	789624	2	320,1519,	0,2821,
#Partially deleted in new
chr17	410336	421097	chr17:410336-421097	1	+	410342	420829	789624	2	310,426,	0,10335,
#Partially deleted in new
chr17	410360	414305	chr17:410360-414305	0	+	410360	414057	789624	3	286,283,309,	0,2787,3636,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	414094	423719	chr17:414094-423719	0	+	414094	414115	8553170	2	259,240,	0,9385,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	414192	431062	chr17:414192-431062	0	+	414192	414192	8553170	5	161,279,193,113,12,	0,6479,7942,9287,16858,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	439977	445939	chr17:439977-445939	3	-	443163	445939	789624	2	3517,104,	0,5858,
#Partially deleted in new
chr17	503170	511347	chr17:503170-511347	3	+	503170	503170	8553170	3	126,146,221,	0,5159,7956,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr17	508667	714856	chr17:508667-714856	1	-	519127	714709	789624	22	10631,105,138,70,149,79,83,148,243,95,102,142,143,144,79,120,116,87,67,50,81,234,	0,11158,12933,24174,28360,43204,44712,51758,53835,77602,93127,114865,118506,119420,122882,144623,147170,153141,188750,190663,201865,205955,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	517381	714830	chr17:517381-714830	1	-	517407	714709	789624	4	258,38,81,208,	0,181961,193151,197241,
#Partially deleted in new
chr17	518952	676407	chr17:518952-676407	0	-	518952	518952	8553170	17	346,105,138,70,149,79,83,148,243,95,150,102,142,143,144,79,228,	0,873,2648,13889,18075,32919,34427,41473,43550,67317,80992,82842,104580,108221,109135,112597,157227,
#Partially deleted in new
chr17	519118	522995	chr17:519118-522995	0	-	519118	519118	8553170	4	180,105,138,71,	0,707,2482,3806,
#Partially deleted in new
chr17	519854	532993	chr17:519854-532993	0	-	519854	519854	8553170	3	76,138,152,	0,1746,12987,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	523139	540576	chr17:523139-540576	3	+	523139	523139	8553170	2	290,188,	0,17249,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr17	531967	714856	chr17:531967-714856	0	-	632798	714709	789624	20	944,149,79,83,148,243,95,102,142,143,144,79,98,120,116,87,67,50,81,234,	0,5060,19904,21412,28458,30535,54302,69827,91565,95206,96120,99582,100776,121323,123870,129841,165450,167363,178565,182655,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr17	532317	714843	chr17:532317-714843	3	-	532826	714709	789624	18	594,149,79,83,148,243,95,102,142,143,144,79,120,116,67,50,81,221,	0,4710,19554,21062,28108,30185,53952,69477,91215,94856,95770,99232,120973,123520,165100,167013,178215,182305,
#Partially deleted in new
chr17	532707	714846	chr17:532707-714846	1	-	532826	714709	789624	19	204,149,79,83,148,243,95,102,142,143,144,79,120,116,87,67,50,81,224,	0,4320,19164,20672,27718,29795,53562,69087,90825,94466,95380,98842,120583,123130,129101,164710,166623,177825,181915,
#Partially deleted in new
chr17	532826	714709	chr17:532826-714709	0	-	551896	714709	789624	18	85,149,79,30,148,243,95,102,142,143,79,120,116,87,67,50,81,87,	0,4201,19045,20606,27599,29676,53443,68968,90706,94347,98723,120464,123011,128982,164591,166504,177706,181796,
#Partially deleted in new
chr17	532826	714709	chr17:532826-714709	1	-	532826	714709	789624	12	85,149,79,83,148,243,95,102,67,50,81,87,	0,4201,19045,20553,27599,29676,53443,68968,164591,166504,177706,181796,
#Partially deleted in new
chr17	536423	539204	chr17:536423-539204	0	-	536423	536423	8553170	1	2781,	0,
#Partially deleted in new
chr17	551633	562686	chr17:551633-562686	0	-	551633	551633	8553170	4	317,83,148,184,	0,1746,8792,10869,
#Partially deleted in new
chr17	552565	553417	chr17:552565-553417	3	+	552565	552565	8553170	2	351,241,	0,611,
#Partially deleted in new
chr17	600879	628231	chr17:600879-628231	0	-	600894	628231	789624	5	198,102,142,143,144,	0,915,22653,26294,27208,
#Deleted in new
chr17	616001	616595	chr17:616001-616595	7	+	616001	616001	16724991	1	594,	0,
#Partially deleted in new
chr17	631549	685195	chr17:631549-685195	0	-	631549	631549	8553170	5	79,120,116,87,159,	0,21741,24288,30259,53487,
#Partially deleted in new
chr17	653325	721717	chr17:653325-721717	0	-	653325	661811	789624	7	85,116,87,67,50,81,127,	0,2512,8483,44092,46005,57207,68265,
#Deleted in new
chr17	656793	657547	chr17:656793-657547	7	-	656793	656793	16724991	1	754,	0,
#Partially deleted in new
chr17	657428	714791	chr17:657428-714791	0	-	657428	657428	8553170	6	121,87,67,50,81,169,	0,4380,39989,41902,53104,57194,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	673695	675667	chr17:673695-675667	0	-	673695	673695	8553170	1	1972,	0,
#Partially deleted in new
chr17	674366	676345	chr17:674366-676345	0	-	674366	674366	8553170	2	517,166,	0,1813,
#Partially deleted in new
chr17	697417	714513	chr17:697417-714513	0	-	697417	697417	8553170	4	67,50,81,372,	0,1913,13115,16724,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	705624	714814	chr17:705624-714814	0	-	705624	705624	8553170	3	471,81,192,	0,4908,8998,
#Partially deleted in new
chr17	732411	742972	chr17:732411-742972	3	+	732647	741570	789624	5	358,84,202,96,1672,	0,686,5434,8093,8889,
#Partially deleted in new
chr17	732411	740586	chr17:732411-740586	0	+	732647	733097	789624	2	770,82,	0,8093,
#Partially deleted in new
chr17	732545	741365	chr17:732545-741365	1	+	732647	741304	789624	3	224,84,65,	0,552,8755,
#Partially deleted in new
chr17	732583	742841	chr17:732583-742841	1	+	732647	741570	789624	4	186,84,202,1541,	0,514,5262,8717,
#Partially deleted in new
chr17	732676	742883	chr17:732676-742883	0	+	732755	733097	789624	4	505,202,96,1583,	0,5169,7828,8624,
#Partially deleted in new
chr17	733124	742014	chr17:733124-742014	0	+	733124	740562	789624	3	57,96,714,	0,7380,8176,
#Deleted in new
chr17	741663	742884	chr17:741663-742884	0	+	741663	741663	8553170	2	389,288,	0,933,
#Deleted in new
chr17	744413	752261	chr17:744413-752261	3	-	744865	752142	789624	2	3619,129,	0,7719,
#Deleted in new
chr17	744622	749351	chr17:744622-749351	1	-	744865	748009	789624	1	4729,	0,
#Deleted in new
chr17	746630	752174	chr17:746630-752174	1	-	747225	752142	789624	3	652,488,42,	0,914,5502,
#Deleted in new
chr17	747166	752185	chr17:747166-752185	0	-	747166	749835	789624	3	866,96,53,	0,2647,4966,
#Deleted in new
chr17	747239	752776	chr17:747239-752776	0	-	747239	749835	789624	3	793,96,159,	0,2574,5378,
#Deleted in new
chr17	747440	753999	chr17:747440-753999	0	-	747440	748009	789624	2	592,41,	0,6518,
#Deleted in new
chr17	747843	752038	chr17:747843-752038	0	-	747843	749835	789624	3	189,96,388,	0,1970,3807,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	752659	755336	chr17:752659-755336	7	+	752659	752659	16724991	1	2677,	0,
#Deleted in new
chr17	752666	754888	chr17:752666-754888	4	+	752666	752666	16724991	2	359,481,	0,1741,
#Deleted in new
chr17	752883	753133	chr17:752883-753133	5	+	752883	752883	16724991	1	250,	0,
#Deleted in new
chr17	754308	754888	chr17:754308-754888	4	+	754308	754308	16724991	2	23,481,	0,99,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	757096	760161	chr17:757096-760161	0	-	757096	757096	8553170	2	225,51,	0,3014,
#Partially deleted in new
chr17	759096	782341	chr17:759096-782341	3	-	760172	782255	0	9	1142,87,114,87,137,145,121,50,176,	0,10772,10947,11324,12228,16678,17771,19598,23069,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	759309	783390	chr17:759309-783390	1	-	760172	783265	789624	13	929,87,114,87,137,145,121,50,72,213,105,129,308,	0,10559,10734,11111,12015,16465,17558,19385,22856,22929,23143,23249,23773,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	759322	777692	chr17:759322-777692	0	-	759322	759322	8553170	7	916,87,114,87,137,145,825,	0,10546,10721,11098,12002,16452,17545,
#Partially deleted in new
chr17	759451	782294	chr17:759451-782294	0	-	759451	759451	8553170	7	787,87,1418,145,121,50,129,	0,10417,10592,16323,17416,19243,22714,
#Partially deleted in new
chr17	760021	782267	chr17:760021-782267	0	-	781902	782255	789624	10	217,87,114,87,137,145,121,123,181,102,	0,9847,10022,10399,11303,15753,16846,18600,21841,22144,
#Partially deleted in new
chr17	760063	771379	chr17:760063-771379	0	-	770190	771379	789624	5	175,87,181,87,55,	0,9805,9980,10357,11261,
#Partially deleted in new
chr17	760072	771404	chr17:760072-771404	0	-	760172	771404	789624	4	166,87,114,80,	0,9796,9971,11252,
#Partially deleted in new
chr17	760097	782280	chr17:760097-782280	0	-	778789	782255	789624	9	141,87,114,87,137,145,121,116,115,	0,9771,9946,10323,11227,15677,16770,18597,22068,
#Partially deleted in new
chr17	760187	782279	chr17:760187-782279	0	-	760187	782255	789624	7	51,87,137,145,121,50,114,	0,10233,11137,15587,16680,18507,21978,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	763564	765319	chr17:763564-765319	7	-	763564	763564	16724991	2	1450,304,	0,1451,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	763564	765319	chr17:763564-765319	0	-	763564	763564	8553170	1	1755,	0,
#Partially deleted in new
chr17	770043	782291	chr17:770043-782291	0	-	778654	782255	789624	7	114,87,137,145,121,123,126,	0,377,1281,5731,6824,8578,12122,
#Partially deleted in new
chr17	771450	782276	chr17:771450-782276	0	-	778640	782255	789624	5	11,145,121,40,111,	0,4324,5417,7171,10715,
#Partially deleted in new
chr17	776880	782193	chr17:776880-782193	0	-	781988	782193	789624	3	108,123,331,	0,1741,4982,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	778301	782280	chr17:778301-782280	0	-	778301	778301	8553170	2	443,115,	0,3864,
#Partially deleted in new
chr17	778640	782255	chr17:778640-782255	1	-	778640	782255	789624	2	21,90,	0,3525,
#Partially deleted in new
chr17	778789	782255	chr17:778789-782255	1	-	778789	782255	789624	2	21,90,	0,3376,
#Partially deleted in new
chr17	782272	792509	chr17:782272-792509	3	+	782378	792069	789624	4	420,245,168,976,	0,810,5692,9261,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	782357	783517	chr17:782357-783517	0	+	782357	782357	8553170	2	335,435,	0,725,
#Partially deleted in new
chr17	782366	791766	chr17:782366-791766	0	+	782378	787983	789624	3	326,168,233,	0,5598,9167,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	782599	788198	chr17:782599-788198	0	+	782599	788158	789624	3	93,245,234,	0,483,5365,
#Deleted in new
chr17	789743	790525	chr17:789743-790525	3	-	789743	789743	8553170	2	239,247,	0,535,
#Deleted in new
chr17	795305	795794	chr17:795305-795794	3	+	795305	795305	8553170	1	489,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	799312	979770	chr17:799312-979770	3	-	800948	979678	789624	8	1819,125,180,107,101,134,118,452,	0,4369,5755,20126,23044,24319,26648,180006,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	799312	864111	chr17:799312-864111	1	-	800948	864050	789624	8	1819,125,180,107,101,134,118,97,	0,4369,5755,20126,23044,24319,26648,64702,
#Partially deleted in new
chr17	800387	803984	chr17:800387-803984	0	-	800387	800387	8553170	2	744,303,	0,3294,
#Partially deleted in new
chr17	800480	826001	chr17:800480-826001	0	-	800948	826001	789624	6	651,125,107,101,134,41,	0,3201,18958,21876,23151,25480,
#Partially deleted in new
chr17	800767	864097	chr17:800767-864097	1	-	800948	819511	789624	8	364,125,180,107,101,134,118,211,	0,2914,4300,18671,21589,22864,25193,63119,
#Partially deleted in new
chr17	800787	805248	chr17:800787-805248	0	-	800787	800787	8553170	3	344,125,39,	0,2894,4422,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	819113	897014	chr17:819113-897014	0	-	819113	819113	8553170	5	432,101,134,118,129,	0,3243,4518,6847,77772,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	823645	908034	chr17:823645-908034	0	-	823645	823645	8553170	4	120,118,90,331,	0,2315,81507,84058,
#Partially deleted in new
chr17	823686	930051	chr17:823686-930051	0	-	823686	823686	8553170	3	79,118,389,	0,2274,105976,
#Partially deleted in new
chr17	825565	979349	chr17:825565-979349	0	-	825565	825565	8553170	2	513,31,	0,153753,
#Partially deleted in new
chr17	877901	880093	chr17:877901-880093	3	+	877901	877901	8553170	2	371,214,	0,1978,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	909631	911212	chr17:909631-911212	3	+	909631	909631	789624	2	301,519,	0,1062,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	929955	933413	chr17:929955-933413	0	-	929955	929955	8553170	2	476,69,	0,3389,
#Deleted in new
chr17	959033	959366	chr17:959033-959366	7	+	959033	959033	16724991	1	333,	0,
#Deleted in new
chr17	978298	979462	chr17:978298-979462	0	-	978298	978298	8553170	2	332,144,	0,1020,
#Partially deleted in new
chr17	997116	1003671	chr17:997116-1003671	3	+	997142	1001088	789624	4	264,197,73,2660,	0,1662,2395,3895,
#Partially deleted in new
chr17	1003517	1179874	chr17:1003517-1179874	3	-	1006079	1179727	789624	23	2652,148,106,135,140,110,60,132,98,75,105,76,123,166,122,141,53,61,108,186,99,185,208,	0,3647,6161,7211,8328,9170,9587,46532,47019,52517,53480,54452,55227,63559,66451,69096,70107,75812,80002,88147,97119,121665,176149,
#Partially deleted in new
chr17	1003526	1187322	chr17:1003526-1187322	1	-	1006079	1125290	789624	23	2643,148,106,135,140,110,60,132,98,75,105,76,123,166,122,141,53,61,108,186,99,185,523,	0,3638,6152,7202,8319,9161,9578,46523,47010,52508,53471,54443,55218,63550,66442,69087,70098,75803,79993,88138,97110,121656,183273,
#Partially deleted in new
chr17	1003526	1012589	chr17:1003526-1012589	0	-	1003526	1003526	8553170	5	2643,148,106,135,744,	0,3638,6152,7202,8319,
#Partially deleted in new
chr17	1005009	1031802	chr17:1005009-1031802	1	-	1005049	1031741	789624	5	139,49,110,60,205,	0,6927,7678,8095,26588,
#Partially deleted in new
chr17	1005734	1011920	chr17:1005734-1011920	0	-	1006009	1011920	789624	5	386,148,106,135,75,	0,1430,3944,4994,6111,
#Partially deleted in new
chr17	1005790	1125755	chr17:1005790-1125755	1	-	1006079	1125464	789624	22	379,148,106,135,140,110,60,132,98,75,105,76,123,166,122,141,53,61,108,186,99,573,	0,1374,3888,4938,6055,6897,7314,44259,44746,50244,51207,52179,52954,61286,64178,66823,67834,73539,77729,85874,94846,119392,
#Partially deleted in new
chr17	1005907	1109100	chr17:1005907-1109100	1	-	1006079	1109068	789624	22	262,148,106,135,140,110,60,132,98,75,105,76,123,166,122,141,53,61,108,186,99,167,	0,1257,3771,4821,5938,6780,7197,44142,44629,50127,51090,52062,52837,61169,64061,66706,67717,73422,77612,85757,94729,103026,
#Partially deleted in new
chr17	1006060	1031838	chr17:1006060-1031838	1	-	1006079	1031741	789624	8	109,148,106,135,140,110,60,241,	0,1104,3618,4668,5785,6627,7044,25537,
#Partially deleted in new
chr17	1006079	1079146	chr17:1006079-1079146	1	-	1006079	1078859	789624	18	90,148,106,135,140,110,60,132,98,75,105,76,123,166,122,141,53,333,	0,1085,3599,4649,5766,6608,7025,43970,44457,49955,50918,51890,52665,60997,63889,66534,67545,72734,
#Partially deleted in new
chr17	1006117	1011388	chr17:1006117-1011388	0	-	1006117	1006117	8553170	5	52,148,106,135,244,	0,1047,3561,4611,5027,
#Partially deleted in new
chr17	1007237	1010796	chr17:1007237-1010796	0	-	1007237	1007237	8553170	3	75,106,372,	0,2441,3187,
#Partially deleted in new
chr17	1007268	1010213	chr17:1007268-1010213	0	-	1007268	1007268	8553170	2	44,535,	0,2410,
#Deleted in new
chr17	1009708	1013194	chr17:1009708-1013194	0	-	1009708	1009708	8553170	5	76,135,140,110,90,	0,1020,2137,2979,3396,
#Deleted in new
chr17	1009715	1013146	chr17:1009715-1013146	0	-	1009715	1009715	8553170	5	69,135,140,110,103,	0,1013,2130,2972,3328,
#Partially deleted in new
chr17	1009737	1039597	chr17:1009737-1039597	0	-	1009737	1009737	8553170	6	47,135,140,110,60,59,	0,991,2108,2950,3367,29801,
#Partially deleted in new
chr17	1010784	1050568	chr17:1010784-1050568	0	-	1012538	1050568	789624	7	79,140,84,110,60,132,32,	0,1061,1689,1903,2320,39265,39752,
#Partially deleted in new
chr17	1011575	1031818	chr17:1011575-1031818	0	-	1011575	1011575	8553170	5	86,140,110,60,221,	0,270,1112,1529,20022,
#Partially deleted in new
chr17	1012261	1050115	chr17:1012261-1050115	0	-	1012261	1012261	8553170	4	296,110,60,66,	0,426,843,37788,
#Partially deleted in new
chr17	1012395	1031818	chr17:1012395-1031818	0	-	1012395	1012395	8553170	4	162,110,60,221,	0,292,709,19202,
#Deleted in new
chr17	1022475	1022559	chr17:1022475-1022559	3	-	1022475	1022475	5263520	1	84,	0,
#Deleted in new
chr17	1049979	1050573	chr17:1049979-1050573	0	-	1049979	1049979	8553170	2	202,37,	0,557,
#Partially deleted in new
chr17	1050049	1058750	chr17:1050049-1058750	0	-	1057901	1058750	789624	6	132,98,75,105,202,6,	0,487,5985,6948,7794,8695,
#Partially deleted in new
chr17	1050093	1083590	chr17:1050093-1083590	0	-	1050093	1050093	8553170	7	50,76,122,141,53,61,71,	0,17073,19875,22520,23531,29236,33426,
#Partially deleted in new
chr17	1050553	1069983	chr17:1050553-1069983	0	-	1050553	1069983	789624	6	81,105,76,123,166,15,	0,6444,7416,8191,16523,19415,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	1055282	1058047	chr17:1055282-1058047	0	-	1055282	1055282	8553170	3	827,105,78,	0,1715,2687,
#Partially deleted in new
chr17	1067116	1079122	chr17:1067116-1079122	0	-	1067116	1078859	789624	5	126,122,141,53,318,	0,2852,5497,6508,11688,
#Partially deleted in new
chr17	1070037	1083771	chr17:1070037-1083771	0	-	1070037	1070037	8553170	5	53,141,53,61,252,	0,2576,3587,9292,13482,
#Partially deleted in new
chr17	1072732	1115436	chr17:1072732-1115436	0	-	1072732	1100711	789624	7	22,53,61,108,186,99,161,	0,892,6597,10787,18932,27904,42543,
#Partially deleted in new
chr17	1083268	1091776	chr17:1083268-1091776	0	-	1083268	1083268	8553170	2	359,112,	0,8396,
#Partially deleted in new
chr17	1083521	1229004	chr17:1083521-1229004	0	-	1083521	1125290	789624	4	106,186,185,212,	0,8143,41661,145271,
#Partially deleted in new
chr17	1091668	1229738	chr17:1091668-1229738	0	-	1091668	1229630	789624	4	182,99,185,946,	0,8968,33514,137124,
#Partially deleted in new
chr17	1091791	1126545	chr17:1091791-1126545	0	-	1091791	1125290	789624	4	59,99,185,206,	0,8845,33391,34548,
#Partially deleted in new
chr17	1091798	1179784	chr17:1091798-1179784	0	-	1091798	1125290	789624	5	52,99,185,143,118,	0,8838,33384,86118,87868,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	1101006	1101273	chr17:1101006-1101273	3	-	1101006	1101006	8553170	1	267,	0,
#Partially deleted in new
chr17	1125323	1154808	chr17:1125323-1154808	0	-	1125323	1125323	8553170	3	44,429,65,	0,28486,29420,
#Deleted in new
chr17	1153809	1154952	chr17:1153809-1154952	0	-	1153809	1153809	8553170	3	429,65,69,	0,573,1074,
#Deleted in new
chr17	1153812	1154619	chr17:1153812-1154619	0	-	1153812	1153812	8553170	2	426,75,	0,732,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	1155965	1156175	chr17:1155965-1156175	7	+	1155965	1155965	16724991	1	210,	0,
#Partially deleted in new
chr17	1181892	1185086	chr17:1181892-1185086	3	+	1181892	1181892	8553170	3	36,45,154,	0,374,3040,
#Deleted in new
chr17	1228143	1229021	chr17:1228143-1229021	0	-	1228143	1228143	8553170	2	155,229,	0,649,
#Partially deleted in new
chr17	1241938	1254000	chr17:1241938-1254000	3	-	1241938	1241938	8553170	2	253,87,	0,11975,
#Deleted in new
chr17	1270558	1271460	chr17:1270558-1271460	3	+	1270563	1271271	789624	1	902,	0,
#Partially deleted in new
chr17	1279662	1300987	chr17:1279662-1300987	3	+	1280001	1298264	789624	3	726,133,2737,	0,15828,18588,
#Partially deleted in new
chr17	1344271	1400378	chr17:1344271-1400378	3	-	1345446	1400110	0	6	1228,137,207,107,200,332,	0,9939,16820,17630,20587,55775,
#Partially deleted in new
chr17	1344538	1365058	chr17:1344538-1365058	0	-	1354297	1365058	789624	4	961,137,79,200,	0,9672,17391,20320,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	1344539	1400220	chr17:1344539-1400220	1	-	1345446	1365056	0	7	960,137,207,107,200,33,174,	0,9671,16552,17362,20319,25169,55507,
#Partially deleted in new
chr17	1344854	1400181	chr17:1344854-1400181	1	-	1345446	1400110	789624	2	645,135,	0,55192,
#Partially deleted in new
chr17	1345154	1361294	chr17:1345154-1361294	0	-	1348000	1361294	789624	4	345,47,137,203,	0,2807,9056,15937,
#Partially deleted in new
chr17	1345257	1400206	chr17:1345257-1400206	0	-	1354326	1400110	789624	4	242,137,200,160,	0,8953,19601,54789,
#Partially deleted in new
chr17	1345327	1400214	chr17:1345327-1400214	1	-	1345439	1400110	789624	3	172,200,168,	0,19531,54719,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	1352069	1352255	chr17:1352069-1352255	3	+	1352069	1352069	8553170	1	186,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	1361670	1400151	chr17:1361670-1400151	0	-	1361670	1361670	8553170	4	338,200,33,105,	0,3188,8038,38376,
#Partially deleted in new
chr17	1361680	1400209	chr17:1361680-1400209	0	-	1361680	1361680	8553170	3	328,200,163,	0,3178,38366,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	1364747	1400200	chr17:1364747-1400200	0	-	1364747	1364747	8553170	2	311,154,	0,35299,
#Partially deleted in new
chr17	1398832	1400206	chr17:1398832-1400206	0	-	1398832	1398832	8553170	1	1374,	0,
#Partially deleted in new
chr17	1398877	1399589	chr17:1398877-1399589	0	-	1398877	1398877	8553170	2	139,119,	0,593,
#Partially deleted in new
chr17	1399043	1400135	chr17:1399043-1400135	0	-	1399043	1399043	8553170	2	223,89,	0,1003,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	1420688	1456258	chr17:1420688-1456258	3	-	1423512	1456117	0	3	2962,536,382,	0,15931,35188,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	1420688	1456223	chr17:1420688-1456223	1	-	1423642	1456117	0	3	2962,366,347,	0,16101,35188,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	1422225	1456149	chr17:1422225-1456149	1	-	1422912	1456117	789624	3	960,158,273,	0,14772,33651,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	1423396	1463162	chr17:1423396-1463162	0	-	1423396	1423396	8553170	3	254,366,210,	0,13393,39556,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	1424472	1426363	chr17:1424472-1426363	3	+	1424472	1424472	8553170	2	445,125,	0,1766,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	1424775	1426484	chr17:1424775-1426484	0	+	1424775	1424775	8553170	2	142,180,	0,1529,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr17	1464185	1492812	chr17:1464185-1492812	1	-	1465725	1492487	0	32	1567,100,98,71,136,56,94,84,160,85,69,77,114,118,106,81,47,95,92,81,106,83,120,72,114,99,180,81,199,116,156,400,	0,3056,3294,3654,3802,4067,4217,5345,5989,6249,6435,6885,7037,7721,7937,10424,10626,10752,13319,13705,13901,14224,14430,15245,15406,16341,16520,18292,18675,19424,19962,28227,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr17	1464185	1485934	chr17:1464185-1485934	1	-	1465725	1485711	0	32	1567,100,98,71,136,56,94,84,160,85,69,77,114,118,106,81,47,95,92,81,106,83,120,72,114,99,180,81,199,116,156,241,	0,3056,3294,3654,3802,4067,4217,5345,5989,6249,6435,6885,7037,7721,7937,10424,10626,10752,13319,13705,13901,14224,14430,15245,15406,16341,16520,18292,18675,19424,19962,21508,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr17	1464185	1486201	chr17:1464185-1486201	1	-	1465725	1484273	0	32	1567,100,98,71,136,56,94,84,160,85,69,77,114,118,106,81,47,95,92,81,106,83,120,72,114,99,180,81,199,116,156,147,	0,3056,3294,3654,3802,4067,4217,5345,5989,6249,6435,6885,7037,7721,7937,10424,10626,10752,13319,13705,13901,14224,14430,15245,15406,16341,16520,18292,18675,19424,19962,21869,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr17	1464185	1485760	chr17:1464185-1485760	1	-	1465725	1485711	789624	32	1567,100,98,71,136,56,94,84,160,85,69,77,114,118,106,81,47,95,92,81,106,83,120,72,114,99,180,81,199,116,156,67,	0,3056,3294,3654,3802,4067,4217,5345,5989,6249,6435,6885,7037,7721,7937,10424,10626,10752,13319,13705,13901,14224,14430,15245,15406,16341,16520,18292,18675,19424,19962,21508,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr17	1464185	1492686	chr17:1464185-1492686	1	-	1465725	1492487	789624	32	1567,100,98,71,136,56,94,84,160,85,69,77,114,118,106,81,47,95,92,81,106,83,120,72,114,99,180,81,199,116,156,274,	0,3056,3294,3654,3802,4067,4217,5345,5989,6249,6435,6885,7037,7721,7937,10424,10626,10752,13319,13705,13901,14224,14430,15245,15406,16341,16520,18292,18675,19424,19962,28227,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr17	1464211	1491682	chr17:1464211-1491682	3	-	1465725	1484273	0	32	1541,100,98,71,136,56,94,84,160,85,69,77,114,118,106,81,47,95,92,81,106,83,120,72,114,99,180,81,199,116,156,83,	0,3030,3268,3628,3776,4041,4191,5319,5963,6223,6409,6859,7011,7695,7911,10398,10600,10726,13293,13679,13875,14198,14404,15219,15380,16315,16494,18266,18649,19398,19936,27388,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr17	1464841	1491610	chr17:1464841-1491610	1	-	1465725	1484273	0	33	911,100,98,71,136,56,94,84,160,85,69,77,114,118,106,81,47,95,92,81,106,83,120,72,114,99,180,81,199,116,156,147,11,	0,2400,2638,2998,3146,3411,3561,4689,5333,5593,5779,6229,6381,7065,7281,9768,9970,10096,12663,13049,13245,13568,13774,14589,14750,15685,15864,17636,18019,18768,19306,22110,26758,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr17	1465016	1492040	chr17:1465016-1492040	1	-	1465725	1484273	0	32	736,100,98,71,136,56,94,84,160,85,69,77,114,118,106,81,47,95,92,81,106,83,120,72,114,99,180,81,199,116,156,31,	0,2225,2463,2823,2971,3236,3386,4514,5158,5418,5604,6054,6206,6890,7106,9593,9795,9921,12488,12874,13070,13393,13599,14414,14575,15510,15689,17461,17844,18593,19131,26993,
#Partially deleted in new
chr17	1465412	1485367	chr17:1465412-1485367	1	-	1465725	1485124	789624	32	340,100,98,71,136,56,94,84,160,85,69,77,114,118,106,81,47,95,92,81,106,83,120,72,114,99,180,81,199,116,156,246,	0,1829,2067,2427,2575,2840,2990,4118,4762,5022,5208,5658,5810,6494,6710,9197,9399,9525,12092,12478,12674,12997,13203,14018,14179,15114,15293,17065,17448,18197,18735,19709,
#Deleted in new
chr17	1467490	1468499	chr17:1467490-1468499	0	-	1467490	1467490	8553170	4	87,71,136,247,	0,349,497,762,
#Partially deleted in new
chr17	1468222	1470219	chr17:1468222-1470219	0	-	1468222	1468222	8553170	3	274,84,45,	0,1308,1952,
#Partially deleted in new
chr17	1468789	1470484	chr17:1468789-1470484	0	-	1468789	1468789	8553170	3	825,160,50,	0,1385,1645,
#Partially deleted in new
chr17	1470239	1471108	chr17:1470239-1471108	0	-	1470629	1471108	789624	4	95,85,167,38,	0,195,381,831,
#Partially deleted in new
chr17	1470630	1472355	chr17:1470630-1472355	0	-	1470630	1470630	8553170	5	59,77,114,118,233,	0,440,592,1276,1492,
#Partially deleted in new
chr17	1471133	1474931	chr17:1471133-1474931	0	-	1471133	1471133	8553170	6	14,114,118,106,81,120,	0,89,773,989,3476,3678,
#Partially deleted in new
chr17	1477289	1478141	chr17:1477289-1478141	0	-	1477289	1477289	8553170	3	307,81,55,	0,601,797,
#Partially deleted in new
chr17	1478676	1481216	chr17:1478676-1481216	0	-	1478676	1478676	8553170	6	59,72,114,99,180,58,	0,754,915,1850,2029,2482,
#Partially deleted in new
chr17	1479685	1481238	chr17:1479685-1481238	0	-	1479685	1479685	8553170	4	20,99,180,254,	0,841,1020,1299,
#Deleted in new
chr17	1480606	1481209	chr17:1480606-1481209	0	-	1480606	1480606	8553170	2	19,504,	0,99,
#Partially deleted in new
chr17	1482488	1486921	chr17:1482488-1486921	0	-	1482488	1484273	789624	5	70,199,116,156,42,	0,372,1121,1659,4391,
#Partially deleted in new
chr17	1482532	1484657	chr17:1482532-1484657	0	-	1482532	1484598	789624	5	26,199,116,156,68,	0,328,1077,1615,2057,
#Partially deleted in new
chr17	1482888	1491237	chr17:1482888-1491237	0	-	1482888	1484273	789624	4	171,116,156,310,	0,721,1259,8039,
#Partially deleted in new
chr17	1494570	1516888	chr17:1494570-1516888	3	-	1495822	1516499	789624	12	1309,105,84,138,187,110,112,176,117,109,108,433,	0,1489,1748,2095,3365,12409,13544,14607,15112,18882,19301,21885,
#Partially deleted in new
chr17	1494608	1516742	chr17:1494608-1516742	1	-	1495822	1513485	789624	14	1271,105,84,138,187,110,112,176,117,109,108,159,231,287,	0,1451,1710,2057,3327,12371,13506,14569,15074,18844,19263,20818,21279,21847,
#Partially deleted in new
chr17	1494756	1516735	chr17:1494756-1516735	1	-	1495822	1513485	789624	13	1123,105,84,138,187,110,112,176,117,109,108,231,280,	0,1303,1562,1909,3179,12223,13358,14421,14926,18696,19115,21131,21699,
#Partially deleted in new
chr17	1495566	1516618	chr17:1495566-1516618	0	-	1509322	1516499	789624	10	313,105,84,138,187,110,112,176,117,163,	0,493,752,1099,2369,11413,12548,13611,14116,20889,
#Deleted in new
chr17	1495799	1496461	chr17:1495799-1496461	0	-	1495799	1495799	8553170	2	80,402,	0,260,
#Partially deleted in new
chr17	1496154	1516627	chr17:1496154-1516627	0	-	1496154	1516499	789624	5	10,84,138,187,172,	0,164,511,1781,20301,
#Partially deleted in new
chr17	1496488	1498201	chr17:1496488-1498201	0	-	1496488	1496488	8553170	2	315,266,	0,1447,
#Partially deleted in new
chr17	1497757	1507020	chr17:1497757-1507020	0	-	1497757	1497757	8553170	2	365,41,	0,9222,
#Partially deleted in new
chr17	1497935	1516594	chr17:1497935-1516594	0	-	1497935	1509784	789624	7	187,110,112,176,117,108,139,	0,9044,10179,11242,11747,15936,18520,
#Partially deleted in new
chr17	1498060	1508500	chr17:1498060-1508500	0	-	1498060	1498060	8553170	3	62,110,386,	0,8919,10054,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	1498078	1507705	chr17:1498078-1507705	0	-	1498078	1498078	8553170	2	44,726,	0,8901,
#Partially deleted in new
chr17	1506992	1516618	chr17:1506992-1516618	0	-	1506992	1516499	789624	5	97,117,109,108,163,	0,2690,6460,6879,9463,
#Partially deleted in new
chr17	1507085	1513979	chr17:1507085-1513979	0	-	1513547	1513979	789624	6	4,112,186,117,102,108,	0,1029,2082,2597,6367,6786,
#Partially deleted in new
chr17	1508129	1516582	chr17:1508129-1516582	0	-	1509322	1516499	789624	5	97,186,117,108,127,	0,1038,1553,5742,8326,
#Partially deleted in new
chr17	1508976	1513512	chr17:1508976-1513512	0	-	1508976	1508976	8553170	3	377,117,60,	0,706,4476,
#Partially deleted in new
chr17	1509249	1515701	chr17:1509249-1515701	0	-	1509249	1513485	789624	5	104,117,109,108,133,	0,433,4203,4622,6319,
#Partially deleted in new
chr17	1509340	1516680	chr17:1509340-1516680	0	-	1513547	1516499	789624	5	13,117,102,108,225,	0,342,4112,4531,7115,
#Partially deleted in new
chr17	1509682	1516612	chr17:1509682-1516612	0	-	1509682	1513485	789624	6	117,109,108,17,231,157,	0,3770,4189,5886,6205,6773,
#Partially deleted in new
chr17	1509714	1516653	chr17:1509714-1516653	0	-	1509714	1509784	789624	4	85,108,231,198,	0,4157,6173,6741,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	1510420	1516661	chr17:1510420-1516661	0	-	1515473	1516499	789624	4	93,108,159,206,	0,3451,5006,6035,
#Partially deleted in new
chr17	1516930	1518096	chr17:1516930-1518096	3	+	1516930	1516930	789624	2	163,379,	0,787,
#Partially deleted in new
chr17	1517717	1562816	chr17:1517717-1562816	3	-	1521600	1562560	0	12	2821,67,123,111,78,84,75,8,92,146,31,276,	0,3861,16381,17464,17723,21151,23848,25302,30578,35286,40811,44823,
#Partially deleted in new
chr17	1517992	1562791	chr17:1517992-1562791	1	-	1521600	1562560	789624	12	2546,67,123,111,78,84,75,8,92,146,31,251,	0,3586,16106,17189,17448,20876,23573,23649,30303,35011,40536,44548,
#Partially deleted in new
chr17	1520212	1562746	chr17:1520212-1562746	0	-	1538944	1562560	789624	10	326,67,123,111,78,84,92,146,31,206,	0,1366,13886,14969,15228,18656,28083,32791,38316,42328,
#Partially deleted in new
chr17	1534168	1553072	chr17:1534168-1553072	0	-	1534168	1553072	789624	9	53,111,78,57,84,75,8,92,69,	0,1013,1272,1616,4700,7397,8851,14127,18835,
#Partially deleted in new
chr17	1535181	1562739	chr17:1535181-1562739	0	-	1535181	1548365	789624	8	111,78,84,75,8,92,146,199,	0,259,3687,6384,7838,13114,17822,27359,
#Partially deleted in new
chr17	1535261	1559801	chr17:1535261-1559801	0	-	1535261	1548365	789624	9	31,78,84,75,8,92,146,31,46,	0,179,3607,6304,7758,13034,17742,23267,24494,
#Partially deleted in new
chr17	1535470	1562768	chr17:1535470-1562768	0	-	1535470	1541631	789624	7	48,84,75,92,146,31,113,	0,3398,6095,12825,17533,23058,27185,
#Partially deleted in new
chr17	1535506	1562780	chr17:1535506-1562780	0	-	1535506	1548365	789624	8	12,84,75,8,92,146,31,125,	0,3362,6059,7513,12789,17497,23022,27149,
#Partially deleted in new
chr17	1538438	1541599	chr17:1538438-1541599	0	-	1538438	1538438	8553170	2	514,34,	0,3127,
#Partially deleted in new
chr17	1541586	1562630	chr17:1541586-1562630	0	-	1541586	1548365	789624	7	54,8,92,146,31,83,90,	0,1433,6709,11417,16942,19612,20954,
#Partially deleted in new
chr17	1543019	1559801	chr17:1543019-1559801	0	-	1543019	1559593	789624	5	8,92,146,31,294,	0,5276,9984,15509,16488,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	1569266	1628836	chr17:1569266-1628836	3	-	1575603	1627874	789624	14	6499,124,74,133,139,147,203,134,93,77,56,208,206,43,	0,7330,8983,13937,16646,21535,22002,22299,23920,43928,45712,47295,58448,59527,
#Partially deleted in new
chr17	1574371	1628341	chr17:1574371-1628341	1	-	1575603	1627874	789624	15	1394,124,74,133,139,12,147,203,134,93,77,56,208,206,261,	0,2225,3878,8832,11541,12577,16430,16897,17194,18815,38823,40607,42190,53343,53709,
#Partially deleted in new
chr17	1575500	1605085	chr17:1575500-1605085	1	-	1575603	1604829	789624	10	265,124,74,133,139,147,203,134,93,346,	0,1096,2749,7703,10412,15301,15768,16065,17686,29239,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	1576602	1578705	chr17:1576602-1578705	0	-	1576602	1576602	8553170	2	118,456,	0,1647,
#Partially deleted in new
chr17	1578253	1583698	chr17:1578253-1583698	0	-	1578253	1578253	8553170	2	70,495,	0,4950,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	1585238	1628250	chr17:1585238-1628250	0	-	1585238	1585238	8553170	10	813,147,203,134,93,77,56,208,206,137,	0,5563,6030,6327,7948,27956,29740,31323,42476,42875,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	1585238	1628886	chr17:1585238-1628886	0	-	1585238	1585238	8553170	10	813,147,203,134,93,77,56,208,206,93,	0,5563,6030,6327,7948,27956,29740,31323,42476,43555,
#Partially deleted in new
chr17	1590849	1628840	chr17:1590849-1628840	0	-	1615005	1627874	789624	8	99,203,134,93,77,56,206,47,	0,419,716,2337,22345,24129,36865,37944,
#Partially deleted in new
chr17	1590906	1605276	chr17:1590906-1605276	0	-	1590906	1590906	8553170	5	42,203,134,93,84,	0,362,659,2280,14286,
#Partially deleted in new
chr17	1591439	1604944	chr17:1591439-1604944	0	-	1603126	1604829	789624	5	32,134,93,103,205,	0,126,1747,11665,13300,
#Partially deleted in new
chr17	1591621	1627911	chr17:1591621-1627911	0	-	1614986	1627874	789624	7	78,93,77,56,69,53,197,	0,1565,21573,23357,24940,25095,36093,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	1604373	1604672	chr17:1604373-1604672	3	-	1604373	1604373	8553170	1	299,	0,
#Partially deleted in new
chr17	1616365	1627799	chr17:1616365-1627799	0	-	1616365	1616365	8553170	2	404,85,	0,11349,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	1633857	1645747	chr17:1633857-1645747	3	-	1634757	1645697	789624	11	1760,147,122,121,104,129,219,526,102,62,151,	0,2851,3083,4948,5781,6054,6590,9584,10976,11320,11739,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	1633864	1645723	chr17:1633864-1645723	0	-	1639951	1645697	789624	11	1753,147,122,121,104,59,219,526,102,62,127,	0,2844,3076,4941,5774,6047,6583,9577,10969,11313,11732,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	1634389	1645713	chr17:1634389-1645713	1	-	1634757	1645697	789624	9	1228,147,122,125,190,526,102,62,117,	0,2319,2551,4416,6087,9052,10444,10788,11207,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	1634389	1645744	chr17:1634389-1645744	1	-	1635503	1645697	789624	11	1228,110,122,121,104,129,219,526,102,62,148,	0,2319,2551,4416,5249,5522,6058,9052,10444,10788,11207,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	1634389	1645721	chr17:1634389-1645721	0	-	1634389	1634389	8553170	10	1228,147,122,121,104,755,526,102,62,125,	0,2319,2551,4416,5249,5522,9052,10444,10788,11207,
#Partially deleted in new
chr17	1634604	1645712	chr17:1634604-1645712	0	-	1645227	1645697	789624	11	1013,147,122,121,104,129,219,526,102,62,153,	0,2104,2336,4201,5034,5307,5843,8837,10229,10573,10955,
#Partially deleted in new
chr17	1638139	1640557	chr17:1638139-1640557	0	-	1638139	1638139	8553170	4	787,104,59,110,	0,1499,1772,2308,
#Partially deleted in new
chr17	1640580	1644519	chr17:1640580-1644519	0	-	1640580	1640580	8553170	3	86,526,282,	0,2861,3657,
#Deleted in new
chr17	1643319	1645723	chr17:1643319-1645723	0	-	1643319	1643319	8553170	4	648,102,62,127,	0,1514,1858,2277,
#Partially deleted in new
chr17	1646144	1649032	chr17:1646144-1649032	0	-	1646441	1649032	789624	4	475,123,146,234,	0,1690,2205,2654,
#Partially deleted in new
chr17	1646149	1650077	chr17:1646149-1650077	3	-	1646441	1649804	0	8	470,84,123,146,246,107,94,501,	0,756,1685,2200,2649,3050,3262,3427,
#Partially deleted in new
chr17	1646192	1648846	chr17:1646192-1648846	0	-	1646192	1646192	8553170	4	427,84,123,497,	0,713,1642,2157,
#Partially deleted in new
chr17	1646499	1649068	chr17:1646499-1649068	0	-	1646499	1646499	8553170	4	120,123,146,270,	0,1335,1850,2299,
#Partially deleted in new
chr17	1650628	1684882	chr17:1650628-1684882	3	-	1650801	1684571	0	43	328,203,140,141,142,240,194,174,114,129,238,192,161,147,130,170,136,180,248,117,211,147,239,188,193,127,164,207,197,130,135,120,190,120,191,106,126,213,219,165,169,111,103,	0,479,785,1019,2913,3148,4721,5763,6019,7624,7897,8728,9212,9803,10069,10364,10642,10982,11277,22452,22728,23117,23813,24523,24991,25299,25578,25876,26347,26936,27889,28133,28388,28662,28980,30097,30300,30849,31191,31500,32904,33843,34151,
#Deleted in new
chr17	1650628	1651269	chr17:1650628-1651269	0	-	1650658	1651269	789624	2	218,162,	0,479,
#Partially deleted in new
chr17	1650630	1684837	chr17:1650630-1684837	1	-	1650801	1684571	0	42	326,203,140,141,142,240,194,174,114,129,238,192,161,147,130,170,136,180,248,117,211,147,239,188,193,127,164,207,197,130,135,120,190,120,191,106,126,213,219,165,169,366,	0,477,783,1017,2911,3146,4719,5761,6017,7622,7895,8726,9210,9801,10067,10362,10640,10980,11275,22450,22726,23115,23811,24521,24989,25297,25576,25874,26345,26934,27887,28131,28386,28660,28978,30095,30298,30847,31189,31498,32902,33841,
#Deleted in new
chr17	1650839	1652146	chr17:1650839-1652146	0	-	1650839	1650839	8553170	4	117,203,140,499,	0,268,574,808,
#Partially deleted in new
chr17	1651662	1653911	chr17:1651662-1653911	0	-	1651662	1651662	8553170	4	126,57,142,135,	0,318,1879,2114,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	1652730	1654980	chr17:1652730-1654980	0	-	1652730	1652730	8553170	2	953,1204,	0,1046,
#Deleted in new
chr17	1659463	1661329	chr17:1659463-1661329	0	-	1659463	1659463	8553170	5	538,147,130,170,59,	0,968,1234,1529,1807,
#Deleted in new
chr17	1659968	1662038	chr17:1659968-1662038	0	-	1659968	1662038	789624	6	33,147,130,170,136,133,	0,463,729,1024,1302,1937,
#Deleted in new
chr17	1660926	1661778	chr17:1660926-1661778	0	-	1660926	1660926	8553170	2	480,168,	0,684,
#Deleted in new
chr17	1672940	1673409	chr17:1672940-1673409	0	-	1672940	1672940	8553170	2	257,53,	0,416,
#Partially deleted in new
chr17	1674537	1684807	chr17:1674537-1684807	0	-	1674537	1684571	789624	19	143,188,193,127,164,207,197,130,135,120,190,120,191,106,126,213,219,169,336,	0,614,1082,1390,1669,1967,2438,3027,3980,4224,4479,4753,5071,6188,6391,6940,7282,8995,9934,
#Partially deleted in new
chr17	1674643	1675530	chr17:1674643-1675530	0	-	1674643	1674643	8553170	2	37,379,	0,508,
#Deleted in new
chr17	1676307	1677271	chr17:1676307-1677271	0	-	1676307	1676307	8553170	3	63,207,296,	0,197,668,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	1678440	1679310	chr17:1678440-1679310	0	-	1678440	1678440	8553170	4	212,120,190,20,	0,321,576,850,
#Deleted in new
chr17	1680480	1681043	chr17:1680480-1681043	0	-	1680480	1680480	8553170	2	351,115,	0,448,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	1683020	1684852	chr17:1683020-1684852	0	-	1683020	1683020	8553170	3	681,111,73,	0,1451,1759,
#Deleted in new
chr17	1684725	1685151	chr17:1684725-1685151	3	+	1684725	1684725	8553170	1	426,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	1702789	1710438	chr17:1702789-1710438	3	-	1707769	1710242	789624	4	5433,83,83,372,	0,6709,7014,7277,
#Deleted in new
chr17	1711492	1716210	chr17:1711492-1716210	1	-	1711492	1711492	789624	4	907,312,83,81,	0,2210,2878,4637,
#Deleted in new
chr17	1711510	1716251	chr17:1711510-1716251	1	-	1711510	1711510	789624	2	2504,122,	0,4619,
#Deleted in new
chr17	1711970	1716212	chr17:1711970-1716212	0	-	1711970	1711970	8553170	4	429,159,83,83,	0,1885,2400,4159,
#Deleted in new
chr17	1712091	1716197	chr17:1712091-1716197	2	-	1712091	1712091	8553170	3	308,159,68,	0,1764,4038,
#Deleted in new
chr17	1712250	1716341	chr17:1712250-1716341	1	-	1712250	1712250	8553170	3	396,159,212,	0,1605,3879,
#Deleted in new
chr17	1712268	1716211	chr17:1712268-1716211	0	-	1712268	1712268	8553170	3	131,312,82,	0,1434,3861,
#Deleted in new
chr17	1712360	1716211	chr17:1712360-1716211	1	-	1712360	1712360	8553170	4	544,190,83,82,	0,1495,2010,3769,
#Deleted in new
chr17	1712579	1716210	chr17:1712579-1716210	0	-	1712579	1712579	8553170	4	325,159,83,81,	0,1276,1791,3550,
#Deleted in new
chr17	1712662	1716208	chr17:1712662-1716208	0	-	1712662	1712662	8553170	3	233,312,79,	0,1040,3467,
#Deleted in new
chr17	1712679	1716210	chr17:1712679-1716210	0	-	1712679	1712679	8553170	3	225,159,81,	0,1176,3450,
#Deleted in new
chr17	1712713	1716210	chr17:1712713-1716210	0	-	1712713	1712713	8553170	3	191,312,81,	0,989,3416,
#Deleted in new
chr17	1712766	1716208	chr17:1712766-1716208	0	-	1712766	1712766	8553170	4	129,159,83,79,	0,1089,1604,3363,
#Deleted in new
chr17	1712769	1716211	chr17:1712769-1716211	0	-	1712769	1712769	8553170	4	286,159,83,82,	0,1086,1601,3360,
#Deleted in new
chr17	1712791	1716208	chr17:1712791-1716208	0	-	1712791	1712791	8553170	4	104,312,83,79,	0,911,1579,3338,
#Deleted in new
chr17	1712824	1716209	chr17:1712824-1716209	0	-	1712824	1712824	8553170	4	80,312,83,80,	0,878,1546,3305,
#Deleted in new
chr17	1712878	1716210	chr17:1712878-1716210	0	-	1712878	1712878	8553170	3	177,312,81,	0,824,3251,
#Deleted in new
chr17	1712882	1716247	chr17:1712882-1716247	0	-	1712882	1712882	8553170	4	43,312,83,118,	0,820,1488,3247,
#Deleted in new
chr17	1712974	1716210	chr17:1712974-1716210	0	-	1712974	1712974	8553170	4	81,312,83,81,	0,728,1396,3155,
#Deleted in new
chr17	1713447	1717174	chr17:1713447-1717174	1	-	1713447	1713447	8553170	4	567,83,143,138,	0,923,2682,3589,
#Deleted in new
chr17	1713902	1713987	chr17:1713902-1713987	3	-	1713902	1713902	5263520	1	85,	0,
#Partially deleted in new
chr17	1716522	1738599	chr17:1716522-1738599	3	+	1716575	1737685	789624	10	111,108,191,191,166,166,690,146,180,1235,	0,13857,14232,14545,15802,16143,17004,19049,19516,20842,
#Partially deleted in new
chr17	1716522	1731227	chr17:1716522-1731227	0	+	1716575	1731227	789624	4	111,108,191,160,	0,13857,14232,14545,
#Partially deleted in new
chr17	1716522	1733645	chr17:1716522-1733645	0	+	1716571	1733645	789624	4	111,166,166,119,	0,15802,16143,17004,
#Partially deleted in new
chr17	1716535	1738599	chr17:1716535-1738599	1	+	1728112	1737685	789624	11	98,637,108,191,191,166,166,690,146,180,1235,	0,11454,13844,14219,14532,15789,16130,16991,19036,19503,20829,
#Partially deleted in new
chr17	1716546	1730837	chr17:1716546-1730837	0	+	1716546	1716546	8553170	2	87,458,	0,13833,
#Partially deleted in new
chr17	1716600	1738488	chr17:1716600-1738488	1	+	1731184	1737685	789624	9	114,191,191,166,166,690,146,180,1124,	0,14154,14467,15724,16065,16926,18971,19438,20764,
#Partially deleted in new
chr17	1724539	1738594	chr17:1724539-1738594	1	+	1730393	1737685	789624	10	247,108,191,191,166,166,690,146,180,1230,	0,5840,6215,6528,7785,8126,8987,11032,11499,12825,
#Partially deleted in new
chr17	1724689	1733679	chr17:1724689-1733679	0	+	1732412	1733679	789624	4	97,166,166,153,	0,7635,7976,8837,
#Partially deleted in new
chr17	1724959	1738592	chr17:1724959-1738592	1	+	1724959	1737685	789624	10	3667,108,191,191,166,166,690,146,180,1228,	0,5420,5795,6108,7365,7706,8567,10612,11079,12405,
#Partially deleted in new
chr17	1725747	1738585	chr17:1725747-1738585	3	-	1725747	1725747	8553170	2	164,295,	0,12543,
#Partially deleted in new
chr17	1727573	1738584	chr17:1727573-1738584	0	+	1727573	1727573	8553170	9	1053,108,191,191,166,166,690,647,1220,	0,2806,3181,3494,4751,5092,5953,7998,9791,
#Partially deleted in new
chr17	1728209	1730927	chr17:1728209-1730927	0	+	1728209	1730927	789624	2	417,173,	0,2545,
#Partially deleted in new
chr17	1730460	1733537	chr17:1730460-1733537	0	+	1730460	1732477	789624	5	27,191,166,166,11,	0,294,1864,2205,3066,
#Deleted in new
chr17	1730470	1731213	chr17:1730470-1731213	0	+	1730470	1730470	8553170	2	475,146,	0,597,
#Partially deleted in new
chr17	1731183	1732977	chr17:1731183-1732977	0	+	1731183	1731183	8553170	3	75,166,312,	0,1141,1482,
#Partially deleted in new
chr17	1742835	1755265	chr17:1742835-1755265	3	+	1744995	1754534	789624	10	73,67,39,63,202,144,204,143,205,1144,	0,2156,2339,2497,2872,4183,4473,5762,9750,11286,
#Partially deleted in new
chr17	1742835	1748647	chr17:1742835-1748647	0	+	1744995	1748647	789624	8	73,67,39,63,202,144,204,50,	0,2156,2339,2497,2872,4183,4473,5762,
#Partially deleted in new
chr17	1742842	1754642	chr17:1742842-1754642	1	+	1744995	1754534	789624	9	66,67,39,73,144,204,143,205,521,	0,2149,2332,2490,4176,4466,5755,9743,11279,
#Partially deleted in new
chr17	1742868	1754200	chr17:1742868-1754200	0	+	1744995	1754200	789624	8	40,67,39,63,202,143,205,79,	0,2123,2306,2464,2839,5729,9717,11253,
#Partially deleted in new
chr17	1743025	1755268	chr17:1743025-1755268	1	+	1744995	1754534	789624	10	51,67,39,63,202,144,204,143,205,1147,	0,1966,2149,2307,2682,3993,4283,5572,9560,11096,
#Partially deleted in new
chr17	1761958	1777574	chr17:1761958-1777574	3	+	1766910	1777446	0	8	155,92,199,156,204,143,211,388,	0,4944,7893,9070,9913,13099,14573,15228,
#Partially deleted in new
chr17	1762028	1771169	chr17:1762028-1771169	0	+	1766910	1771169	789624	4	85,92,160,141,	0,4874,7862,9000,
#Partially deleted in new
chr17	1762060	1771930	chr17:1762060-1771930	0	+	1762060	1762060	8553170	5	53,92,379,156,59,	0,4842,7611,8968,9811,
#Partially deleted in new
chr17	1762067	1771972	chr17:1762067-1771972	0	+	1766910	1770895	789624	5	46,92,199,351,101,	0,4835,7784,8766,9804,
#Partially deleted in new
chr17	1762067	1776578	chr17:1762067-1776578	0	+	1771993	1776578	789624	6	46,199,156,204,143,47,	0,7784,8961,9804,12990,14464,
#Partially deleted in new
chr17	1762111	1770028	chr17:1762111-1770028	0	+	1766910	1770028	789624	3	162,92,177,	0,4791,7740,
#Partially deleted in new
chr17	1762828	1771141	chr17:1762828-1771141	0	+	1766910	1771141	789624	4	55,92,199,113,	0,4074,7023,8200,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	1766273	1771080	chr17:1766273-1771080	0	+	1766910	1771080	789624	4	388,92,199,52,	0,629,3578,4755,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	1770525	1772032	chr17:1770525-1772032	0	+	1770525	1770525	8553170	2	659,161,	0,1346,
#Partially deleted in new
chr17	1771718	1776604	chr17:1771718-1776604	0	+	1771993	1776604	789624	3	357,143,73,	0,3339,4813,
#Partially deleted in new
chr17	1771718	1777209	chr17:1771718-1777209	0	+	1772033	1777209	789624	4	357,138,211,23,	0,3344,4813,5468,
#Deleted in new
chr17	1776449	1777565	chr17:1776449-1777565	0	+	1776449	1776449	8553170	2	293,379,	0,737,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	1779484	1829881	chr17:1779484-1829881	3	-	1781285	1827994	789624	11	1955,124,117,136,164,183,1168,90,145,146,156,	0,3550,3875,4841,7325,7937,20372,25141,32486,48376,50241,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	1781691	1800805	chr17:1781691-1800805	0	-	1783030	1800805	789624	6	1467,117,136,164,183,949,	0,1668,2634,5118,5730,18165,
#Partially deleted in new
chr17	1783109	1783863	chr17:1783109-1783863	0	-	1783109	1783109	8553170	2	49,504,	0,250,
#Partially deleted in new
chr17	1800723	1829459	chr17:1800723-1829459	0	-	1800723	1827994	789624	5	301,90,145,146,111,	0,3902,11247,27137,28625,
#Partially deleted in new
chr17	1800861	1830634	chr17:1800861-1830634	0	-	1800861	1827994	789624	5	163,90,145,146,42,	0,3764,11109,26999,29731,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	1804345	1829810	chr17:1804345-1829810	0	-	1804345	1804345	8553170	4	370,145,146,85,	0,7625,23515,25380,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	1812061	1829810	chr17:1812061-1829810	0	-	1814710	1827994	789624	4	54,230,146,85,	0,2504,15799,17664,
#Partially deleted in new
chr17	1829701	1872483	chr17:1829701-1872483	0	+	1842808	1872483	789624	6	199,51,79,109,89,50,	0,13101,14218,14876,23399,42732,
#Partially deleted in new
chr17	1829970	1875705	chr17:1829970-1875705	0	+	1842808	1875705	789624	7	164,51,79,109,89,93,45,	0,12832,13949,14607,23130,42463,45690,
#Partially deleted in new
chr17	1829983	1899554	chr17:1829983-1899554	3	+	1830093	1897175	0	17	143,51,79,109,89,93,133,103,69,193,140,149,133,177,108,87,2484,	0,12819,13936,14594,23117,42450,45677,47228,49009,49231,49576,50559,53828,58691,61849,65025,67087,
#Partially deleted in new
chr17	1843919	1854274	chr17:1843919-1854274	0	+	1843919	1843919	8553170	4	79,109,89,136,	0,658,9181,10219,
#Partially deleted in new
chr17	1858038	1858446	chr17:1858038-1858446	7	-	1858038	1858038	16724991	1	408,	0,
#Partially deleted in new
chr17	1872126	1879305	chr17:1872126-1879305	0	+	1872126	1872126	8553170	6	85,93,133,103,69,91,	0,307,3534,5085,6866,7088,
#Partially deleted in new
chr17	1879034	1900082	chr17:1879034-1900082	0	+	1879034	1897175	789624	8	27,193,140,149,133,108,87,3012,	0,180,525,1508,4777,12798,15974,18036,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	1891649	1897536	chr17:1891649-1897536	0	+	1891649	1891649	8553170	3	291,87,466,	0,3359,5421,
#Partially deleted in new
chr17	1934676	2025345	chr17:1934676-2025345	3	-	1936495	2024865	789624	2	3132,493,	0,90176,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	1995613	2003671	chr17:1995613-2003671	3	+	1995613	1995613	8553170	3	90,135,645,	0,5816,7413,
#Partially deleted in new
chr17	2017715	2019102	chr17:2017715-2019102	0	+	2017715	2017715	8553170	2	392,147,	0,1240,
#Partially deleted in new
chr17	2017882	2020706	chr17:2017882-2020706	3	+	2017882	2017882	789624	2	225,1522,	0,1302,
#Partially deleted in new
chr17	2019951	2023664	chr17:2019951-2023664	3	-	2019951	2019951	8553170	2	491,69,	0,3644,
#Partially deleted in new
chr17	2030109	2043430	chr17:2030109-2043430	3	+	2030154	2041857	789624	13	121,153,64,122,158,122,69,157,101,79,141,108,826,	0,3395,3669,5860,6419,6725,9645,10108,10395,10993,11371,11658,12495,
#Partially deleted in new
chr17	2030158	2043024	chr17:2030158-2043024	0	+	2030158	2041857	789624	13	72,153,64,122,125,122,69,157,101,79,141,108,420,	0,3346,3620,5811,6370,6676,9596,10059,10346,10944,11322,11609,12446,
#Partially deleted in new
chr17	2030158	2043024	chr17:2030158-2043024	0	+	2030158	2040223	789624	12	72,153,64,158,122,69,157,101,79,141,108,420,	0,3346,3620,6370,6676,9596,10059,10346,10944,11322,11609,12446,
#Partially deleted in new
chr17	2030166	2037181	chr17:2030166-2037181	0	+	2030166	2030166	8553170	5	64,153,64,717,347,	0,3338,3612,5803,6668,
#Partially deleted in new
chr17	2030185	2037283	chr17:2030185-2037283	0	+	2030185	2030185	8553170	6	45,153,64,122,158,449,	0,3319,3593,5784,6343,6649,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	2033392	2042965	chr17:2033392-2042965	1	+	2033789	2041857	789624	12	265,64,122,158,122,69,157,101,79,141,108,361,	0,386,2577,3136,3442,6362,6825,7112,7710,8088,8375,9212,
#Partially deleted in new
chr17	2033819	2039787	chr17:2033819-2039787	0	+	2033819	2036433	789624	5	23,122,258,122,33,	0,2150,2609,3015,5935,
#Deleted in new
chr17	2034885	2036956	chr17:2034885-2036956	0	+	2034885	2034885	8553170	4	135,122,158,122,	0,1084,1643,1949,
#Partially deleted in new
chr17	2036894	2042703	chr17:2036894-2042703	0	+	2036894	2036894	8553170	7	62,69,388,79,141,108,99,	0,2860,3323,4208,4586,4873,5710,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	2038964	2043424	chr17:2038964-2043424	0	+	2038964	2038964	8553170	7	859,157,101,79,141,108,820,	0,1253,1540,2138,2516,2803,3640,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	2039552	2040481	chr17:2039552-2040481	0	+	2039552	2039552	8553170	2	271,264,	0,665,
#Deleted in new
chr17	2040339	2043424	chr17:2040339-2043424	0	+	2040339	2041857	789624	5	35,101,79,141,1657,	0,165,763,1141,1428,
#Deleted in new
chr17	2040671	2043424	chr17:2040671-2043424	0	+	2040671	2040671	8553170	2	950,1657,	0,1096,
#Deleted in new
chr17	2041101	2043421	chr17:2041101-2043421	0	+	2041101	2041857	789624	4	80,141,108,446,	0,379,666,1874,
#Deleted in new
chr17	2041280	2042690	chr17:2041280-2042690	0	+	2041280	2041280	8553170	3	341,108,86,	0,487,1324,
#Deleted in new
chr17	2041533	2042919	chr17:2041533-2042919	0	+	2041533	2041857	789624	2	342,315,	0,1071,
#Deleted in new
chr17	2041552	2042628	chr17:2041552-2042628	0	+	2041552	2041857	789624	3	69,464,24,	0,215,1052,
#Deleted in new
chr17	2041935	2043430	chr17:2041935-2043430	3	+	2042047	2043104	789624	2	296,826,	0,669,
#Deleted in new
chr17	2042899	2043425	chr17:2042899-2043425	3	-	2042899	2042899	8553170	2	71,351,	0,175,
#Partially deleted in new
chr17	2043474	2044968	chr17:2043474-2044968	3	-	2043474	2043474	8553170	2	150,293,	0,1201,
#Deleted in new
chr17	2049907	2050008	chr17:2049907-2050008	3	-	2049907	2049907	5263520	1	101,	0,
#Deleted in new
chr17	2050270	2050380	chr17:2050270-2050380	3	-	2050270	2050270	5263520	1	110,	0,
#Deleted in new
chr17	2054153	2056719	chr17:2054153-2056719	0	+	2056690	2056719	789624	2	1085,49,	0,2517,
#Deleted in new
chr17	2054214	2056889	chr17:2054214-2056889	0	+	2056690	2056889	789624	3	247,346,219,	0,678,2456,
#Deleted in new
chr17	2054214	2056979	chr17:2054214-2056979	0	+	2056690	2056979	789624	3	75,270,309,	0,754,2456,
#Deleted in new
chr17	2055098	2059686	chr17:2055098-2059686	1	+	2056690	2058835	789624	2	140,3016,	0,1572,
#Deleted in new
chr17	2055098	2063241	chr17:2055098-2063241	1	+	2056690	2058835	789624	2	140,6571,	0,1572,
#Deleted in new
chr17	2056218	2056943	chr17:2056218-2056943	0	+	2056690	2056943	789624	1	725,	0,
#Deleted in new
chr17	2056309	2059686	chr17:2056309-2059686	3	+	2056309	2058835	789624	2	37,3016,	0,361,
#Deleted in new
chr17	2059838	2062257	chr17:2059838-2062257	0	-	2059838	2059838	8553170	1	2419,	0,
#Partially deleted in new
chr17	2059842	2303771	chr17:2059842-2303771	3	-	2061491	2303720	0	19	1780,82,212,154,147,177,202,169,117,146,62,213,111,79,107,111,193,1759,139,	0,5230,5625,8935,21967,25882,112815,126820,128556,176649,184815,222804,223782,232709,233028,237400,238020,239063,243790,
#Partially deleted in new
chr17	2059845	2088761	chr17:2059845-2088761	0	-	2059845	2059845	8553170	7	1777,82,212,154,147,177,1687,	0,5227,5622,8932,21964,25879,27229,
#Partially deleted in new
chr17	2059849	2266199	chr17:2059849-2266199	1	-	2061491	2236636	0	12	1773,82,212,154,147,177,202,169,117,146,62,232,	0,5223,5618,8928,21960,25875,112808,126813,128549,176642,184808,206118,
#Partially deleted in new
chr17	2059875	2082310	chr17:2059875-2082310	0	-	2059875	2059875	8553170	6	1747,82,212,154,147,84,	0,5197,5592,8902,21934,22351,
#Partially deleted in new
chr17	2061373	2082301	chr17:2061373-2082301	0	-	2061373	2061373	8553170	6	249,82,212,154,147,58,	0,3699,4094,7404,20436,20870,
#Partially deleted in new
chr17	2061404	2237037	chr17:2061404-2237037	1	-	2061491	2236636	0	11	218,82,212,154,147,177,202,169,117,146,241,	0,3668,4063,7373,20405,24320,111253,125258,126994,175087,175392,
#Deleted in new
chr17	2061451	2066089	chr17:2061451-2066089	0	-	2061451	2061451	8553170	4	171,82,212,87,	0,3621,4016,4551,
#Partially deleted in new
chr17	2061550	2072003	chr17:2061550-2072003	0	-	2061550	2061550	8553170	5	72,82,212,154,81,	0,3522,3917,7227,10372,
#Partially deleted in new
chr17	2068886	2173178	chr17:2068886-2173178	0	-	2068886	2173150	789624	5	45,147,177,202,81,	0,12923,16838,103771,104211,
#Deleted in new
chr17	2072822	2072956	chr17:2072822-2072956	3	+	2072822	2072822	8553170	1	134,	0,
#Partially deleted in new
chr17	2081915	2095112	chr17:2081915-2095112	0	-	2081915	2081915	8553170	3	41,177,328,	0,3809,12869,
#Partially deleted in new
chr17	2085782	2173071	chr17:2085782-2173071	0	-	2085782	2085782	8553170	2	119,414,	0,86875,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	2089680	2101560	chr17:2089680-2101560	3	+	2089680	2089680	8553170	2	89,439,	0,11441,
#Deleted in new
chr17	2101541	2101667	chr17:2101541-2101667	3	+	2101541	2101541	8553170	1	126,	0,
#Deleted in new
chr17	2117625	2117772	chr17:2117625-2117772	3	+	2117625	2117625	8553170	1	147,	0,
#Deleted in new
chr17	2122341	2122508	chr17:2122341-2122508	3	-	2122341	2122341	8553170	1	167,	0,
#Deleted in new
chr17	2127429	2127904	chr17:2127429-2127904	7	-	2127429	2127429	16724991	1	475,	0,
#Partially deleted in new
chr17	2172667	2214349	chr17:2172667-2214349	0	-	2172667	2188453	789624	4	192,169,117,211,	0,13995,15731,41471,
#Partially deleted in new
chr17	2172711	2212737	chr17:2172711-2212737	0	-	2172711	2188453	789624	4	148,169,117,123,	0,13951,15687,39903,
#Partially deleted in new
chr17	2172736	2229464	chr17:2172736-2229464	0	-	2172736	2188453	789624	4	123,169,117,142,	0,13926,15662,56586,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	2172796	2237391	chr17:2172796-2237391	0	-	2172796	2236636	789624	5	63,169,117,146,93,	0,13866,15602,63695,64502,
#Partially deleted in new
chr17	2172801	2244912	chr17:2172801-2244912	0	-	2172801	2236636	789624	6	58,169,117,146,62,40,	0,13861,15597,63690,71856,72071,
#Partially deleted in new
chr17	2172803	2237580	chr17:2172803-2237580	0	-	2172803	2236636	789624	5	56,169,117,146,86,	0,13859,15595,63688,64691,
#Partially deleted in new
chr17	2186724	2266131	chr17:2186724-2266131	0	-	2186724	2236636	789624	4	107,117,146,202,	0,1674,49767,79205,
#Partially deleted in new
chr17	2186736	2240191	chr17:2186736-2240191	0	-	2186736	2236636	789624	4	95,117,146,189,	0,1662,49755,53266,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	2199761	2200039	chr17:2199761-2200039	3	+	2199761	2199761	8553170	1	278,	0,
#Deleted in new
chr17	2213696	2214414	chr17:2213696-2214414	3	+	2213696	2213696	8553170	2	148,256,	0,462,
#Deleted in new
chr17	2215481	2216015	chr17:2215481-2216015	3	-	2215481	2215481	8553170	2	212,111,	0,423,
#Deleted in new
chr17	2232679	2233610	chr17:2232679-2233610	3	+	2232679	2232679	789624	2	49,661,	0,270,
#Deleted in new
chr17	2235712	2236086	chr17:2235712-2236086	3	-	2235712	2235712	8553170	1	374,	0,
#Partially deleted in new
chr17	2303382	2317900	chr17:2303382-2317900	0	+	2315560	2317900	789624	3	95,172,31,	0,12174,14487,
#Partially deleted in new
chr17	2303703	2325260	chr17:2303703-2325260	3	+	2315560	2323873	0	8	314,172,127,104,120,75,210,1606,	0,11853,14166,15122,17602,17838,19432,19951,
#Partially deleted in new
chr17	2303949	2317981	chr17:2303949-2317981	0	+	2315560	2317981	789624	4	68,214,172,112,	0,5827,11607,13920,
#Partially deleted in new
chr17	2303949	2323249	chr17:2303949-2323249	0	+	2315560	2323249	789624	5	68,172,127,104,51,	0,11607,13920,14876,19249,
#Partially deleted in new
chr17	2303949	2323964	chr17:2303949-2323964	1	+	2323219	2323873	789624	3	68,210,310,	0,19186,19705,
#Partially deleted in new
chr17	2303953	2323222	chr17:2303953-2323222	0	+	2321353	2323222	789624	6	64,127,104,120,75,87,	0,13916,14872,17352,17588,19182,
#Deleted in new
chr17	2306760	2307715	chr17:2306760-2307715	7	+	2306760	2306760	16724991	1	955,	0,
#Partially deleted in new
chr17	2307035	2318830	chr17:2307035-2318830	0	+	2315560	2318830	789624	4	282,172,127,5,	0,8521,10834,11790,
#Partially deleted in new
chr17	2315377	2317900	chr17:2315377-2317900	0	+	2315560	2317900	789624	2	351,31,	0,2492,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	2322502	2337507	chr17:2322502-2337507	3	-	2324195	2336427	0	15	1872,75,141,117,133,111,163,191,164,160,425,135,220,104,1177,	0,2001,2186,2801,6840,8012,8444,9666,10458,11054,11969,12757,13008,13534,13828,
#Partially deleted in new
chr17	2324690	2330966	chr17:2324690-2330966	0	-	2325390	2330966	789624	4	139,117,111,20,	0,613,5824,6256,
#Deleted in new
chr17	2329015	2329237	chr17:2329015-2329237	3	-	2329015	2329015	8553170	1	222,	0,
#Deleted in new
chr17	2329118	2329213	chr17:2329118-2329213	0	-	2329118	2329118	789624	1	95,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	2330179	2330370	chr17:2330179-2330370	3	-	2330179	2330179	8553170	1	191,	0,
#Deleted in new
chr17	2330275	2330370	chr17:2330275-2330370	0	-	2330275	2330275	789624	1	95,	0,
#Deleted in new
chr17	2333389	2336457	chr17:2333389-2336457	1	-	2333542	2336427	789624	6	327,425,87,220,104,127,	0,1082,1918,2121,2647,2941,
#Deleted in new
chr17	2334784	2336657	chr17:2334784-2336657	0	-	2335614	2336427	789624	4	112,135,220,327,	0,475,726,1546,
#Deleted in new
chr17	2335564	2336443	chr17:2335564-2336443	0	-	2335564	2335564	8553170	2	166,407,	0,472,
#Partially deleted in new
chr17	2337497	2362157	chr17:2337497-2362157	0	+	2337688	2361669	789624	3	248,163,49,	0,24139,24611,
#Partially deleted in new
chr17	2337505	2364965	chr17:2337505-2364965	0	+	2337688	2364119	789624	9	240,76,163,162,297,135,125,68,69,	0,6039,24131,24603,25332,25959,26553,27090,27391,
#Partially deleted in new
chr17	2337511	2381050	chr17:2337511-2381050	3	+	2337688	2379520	789624	24	234,76,163,162,68,146,135,125,68,161,127,135,154,65,146,129,183,384,125,83,110,97,168,1619,	0,6033,24125,24597,25326,25477,25953,26547,27084,27385,27703,29759,33750,34678,34831,35441,35819,37980,38625,39221,39447,40345,41524,41920,
#Partially deleted in new
chr17	2337513	2381058	chr17:2337513-2381058	1	+	2337688	2379520	789624	23	232,76,163,162,68,146,135,125,68,161,127,154,65,146,129,183,384,125,83,110,97,168,1627,	0,6031,24123,24595,25324,25475,25951,26545,27082,27383,27701,33748,34676,34829,35439,35817,37978,38623,39219,39445,40343,41522,41918,
#Partially deleted in new
chr17	2337621	2380675	chr17:2337621-2380675	1	+	2337688	2380296	789624	23	124,76,163,162,68,146,135,125,68,161,127,154,65,146,129,183,384,125,83,110,97,168,411,	0,5923,24015,24487,25216,25367,25843,26437,26974,27275,27593,33640,34568,34721,35331,35709,37870,38515,39111,39337,40235,41414,42643,
#Deleted in new
chr17	2361776	2363045	chr17:2361776-2363045	0	+	2361776	2363016	789624	3	23,162,57,	0,332,1212,
#Deleted in new
chr17	2363561	2364998	chr17:2363561-2364998	0	+	2364067	2364998	789624	4	38,184,68,102,	0,438,1034,1335,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	2363844	2374580	chr17:2363844-2374580	0	+	2363844	2363844	8553170	4	1213,127,154,2391,	0,1370,7417,8345,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	2366527	2371820	chr17:2366527-2371820	0	+	2366527	2366527	8553170	2	878,559,	0,4734,
#Deleted in new
chr17	2366588	2366791	chr17:2366588-2366791	3	-	2366588	2366588	8553170	1	203,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	2371862	2374281	chr17:2371862-2374281	0	+	2371862	2371862	8553170	1	2419,	0,
#Deleted in new
chr17	2372580	2373385	chr17:2372580-2373385	0	+	2372580	2372580	8553170	2	501,55,	0,750,
#Partially deleted in new
chr17	2375060	2379306	chr17:2375060-2379306	3	-	2375060	2375060	8553170	4	311,134,240,161,	0,498,1552,4085,
#Partially deleted in new
chr17	2376359	2381050	chr17:2376359-2381050	0	+	2376359	2376359	8553170	5	456,110,97,168,1619,	0,599,1497,2676,3072,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	2376798	2377746	chr17:2376798-2377746	1	-	2376798	2376798	8553170	2	54,388,	0,560,
#Partially deleted in new
chr17	2377912	2379565	chr17:2377912-2379565	0	+	2377912	2379337	789624	2	41,530,	0,1123,
#Deleted in new
chr17	2379167	2380810	chr17:2379167-2380810	0	+	2379167	2380276	789624	3	36,62,546,	0,264,1097,
#Partially deleted in new
chr17	2384059	2401118	chr17:2384059-2401118	3	-	2386900	2400712	789624	6	3590,193,112,42,580,479,	0,3797,9983,10245,10815,16580,
#Deleted in new
chr17	2384846	2386664	chr17:2384846-2386664	3	+	2384846	2384846	8553170	2	500,565,	0,1253,
#Partially deleted in new
chr17	2387319	2391815	chr17:2387319-2391815	0	-	2387319	2387319	8553170	3	330,193,413,	0,537,4083,
#Partially deleted in new
chr17	2387343	2392760	chr17:2387343-2392760	0	-	2387343	2387343	8553170	3	306,193,57,	0,513,5360,
#Partially deleted in new
chr17	2387497	2393830	chr17:2387497-2393830	0	-	2387497	2387497	8553170	4	152,193,93,70,	0,359,3905,6263,
#Deleted in new
chr17	2387563	2388298	chr17:2387563-2388298	0	-	2387563	2387563	8553170	2	86,442,	0,293,
#Partially deleted in new
chr17	2387908	2401104	chr17:2387908-2401104	1	-	2388020	2400712	789624	2	141,465,	0,12731,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	2389265	2392078	chr17:2389265-2392078	0	-	2389265	2389265	8553170	1	2813,	0,
#Deleted in new
chr17	2395013	2400446	chr17:2395013-2400446	0	-	2395013	2395013	8553170	2	441,139,	0,5294,
#Deleted in new
chr17	2395329	2396853	chr17:2395329-2396853	0	-	2395329	2395329	8553170	2	125,404,	0,1120,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	2405561	2416085	chr17:2405561-2416085	0	-	2405561	2405561	8553170	3	1669,77,898,	0,8833,9626,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	2407012	2415849	chr17:2407012-2415849	0	-	2407012	2407012	8553170	4	218,77,60,135,	0,7382,8175,8702,
#Partially deleted in new
chr17	2416048	2419769	chr17:2416048-2419769	0	-	2416048	2416048	8553170	2	649,110,	0,3611,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	2416057	2511891	chr17:2416057-2511891	0	-	2416057	2416057	8553170	9	4539,174,90,70,143,116,141,200,133,	0,4673,22051,25432,48150,51703,57466,61628,95701,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	2416075	2511886	chr17:2416075-2511886	3	-	2419969	2502331	0	10	4521,174,90,70,143,116,141,200,128,128,	0,4655,22033,25414,48132,51685,57448,61610,86128,95683,
#Partially deleted in new
chr17	2419587	2511888	chr17:2419587-2511888	0	-	2464312	2502331	789624	8	1009,174,90,70,143,200,128,130,	0,1143,18521,21902,44620,58098,82616,92171,
#Partially deleted in new
chr17	2420184	2511835	chr17:2420184-2511835	0	-	2464312	2502331	789624	10	412,174,167,90,70,143,141,200,128,77,	0,546,16489,17924,21305,44023,53339,57501,82019,91574,
#Partially deleted in new
chr17	2459892	2477885	chr17:2459892-2477885	0	-	2473619	2477885	789624	5	81,143,141,59,200,	0,4315,13631,15348,17793,
#Partially deleted in new
chr17	2460182	2460294	chr17:2460182-2460294	3	-	2460182	2460182	8553170	1	112,	0,
#Partially deleted in new
chr17	2467760	2511889	chr17:2467760-2511889	0	-	2467760	2502331	789624	4	116,200,128,131,	0,9925,34443,43998,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	2477408	2502280	chr17:2477408-2502280	0	-	2477408	2477408	8553170	2	477,77,	0,24795,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	2557752	2558094	chr17:2557752-2558094	3	-	2557752	2557752	8553170	1	342,	0,
#Partially deleted in new
chr17	2586329	2587866	chr17:2586329-2587866	7	-	2586329	2586329	16724991	2	265,942,	0,595,
#Partially deleted in new
chr17	2593209	2667045	chr17:2593209-2667045	0	+	2638288	2667045	789624	5	121,222,85,75,54,	0,44889,72162,72806,73782,
#Partially deleted in new
chr17	2593745	2685615	chr17:2593745-2685615	3	+	2638288	2681802	789624	11	261,222,85,75,207,169,103,229,102,157,3887,	0,44353,71626,72270,73246,76417,78909,80314,82759,86418,87983,
#Partially deleted in new
chr17	2593814	2666090	chr17:2593814-2666090	0	+	2593814	2593814	8553170	4	192,205,222,75,	0,19843,44284,72201,
#Partially deleted in new
chr17	2593956	2684500	chr17:2593956-2684500	0	+	2593956	2593956	8553170	8	50,222,207,57,103,37,98,587,	0,44142,73035,76318,78698,80103,89631,89957,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	2593961	2667182	chr17:2593961-2667182	0	+	2638288	2666028	789624	5	45,128,222,75,191,	0,41421,44137,72054,73030,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	2593967	2638648	chr17:2593967-2638648	0	+	2593967	2593967	8553170	2	39,550,	0,44131,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	2609538	2681910	chr17:2609538-2681910	0	+	2609538	2609538	8553170	4	30,293,157,182,	0,66775,70625,72190,
#Deleted in new
chr17	2613283	2613944	chr17:2613283-2613944	7	-	2613283	2613283	16724991	1	661,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	2639296	2642418	chr17:2639296-2642418	3	+	2639296	2639296	8553170	1	3122,	0,
#Partially deleted in new
chr17	2665380	2670374	chr17:2665380-2670374	0	+	2665380	2665380	8553170	4	76,75,207,212,	0,635,1611,4782,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	2667293	2682038	chr17:2667293-2682038	0	+	2667293	2667293	8553170	7	207,169,103,229,102,157,310,	0,2869,5361,6766,9211,12870,14435,
#Partially deleted in new
chr17	2670267	2682196	chr17:2670267-2682196	0	+	2670267	2681802	789624	5	64,103,229,157,468,	0,2387,3792,9896,11461,
#Partially deleted in new
chr17	2673664	2682348	chr17:2673664-2682348	0	+	2673664	2673664	8553170	4	624,102,157,620,	0,2840,6499,8064,
#Partially deleted in new
chr17	2679686	2681744	chr17:2679686-2681744	0	+	2679686	2679686	8553170	2	634,16,	0,2042,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	2680843	2681857	chr17:2680843-2681857	0	+	2680843	2680843	8553170	2	287,347,	0,667,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	2680957	2681236	chr17:2680957-2681236	3	+	2680957	2680957	8553170	1	279,	0,
#Partially deleted in new
chr17	2683304	2685088	chr17:2683304-2685088	3	-	2683304	2683304	8553170	2	408,218,	0,1566,
#Partially deleted in new
chr17	2688472	2688960	chr17:2688472-2688960	3	+	2688472	2688472	8553170	2	98,205,	0,283,
#Partially deleted in new
chr17	2689385	2711633	chr17:2689385-2711633	1	-	2690593	2704550	789624	26	1392,74,135,94,122,126,81,140,154,85,245,63,153,101,102,224,695,93,148,126,155,125,144,172,203,72,	0,2223,2375,2618,2975,3185,3394,4514,4737,5094,5471,5832,5988,6773,7048,7333,8510,10996,11292,11754,11980,12227,12528,13932,14976,22176,
#Partially deleted in new
chr17	2689385	2712020	chr17:2689385-2712020	3	-	2690593	2704550	789624	26	1392,74,135,94,122,126,81,140,154,85,245,63,153,101,102,224,695,93,148,126,155,125,144,172,203,92,	0,2223,2375,2618,2975,3185,3394,4514,4737,5094,5471,5832,5988,6773,7048,7333,8510,10996,11292,11754,11980,12227,12528,13932,14976,22543,
#Partially deleted in new
chr17	2689388	2704371	chr17:2689388-2704371	0	-	2690593	2704371	789624	25	1389,74,135,94,122,126,81,140,154,85,245,63,153,101,105,224,695,93,148,126,155,125,144,172,10,	0,2220,2372,2615,2972,3182,3391,4511,4734,5091,5468,5829,5985,6770,7045,7330,8507,10993,11289,11751,11977,12224,12525,13929,14973,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	2691552	2694949	chr17:2691552-2694949	0	-	2691552	2691552	8553170	9	130,135,94,122,126,81,377,85,93,	0,208,451,808,1018,1227,2347,2927,3304,
#Partially deleted in new
chr17	2691608	2711795	chr17:2691608-2711795	0	-	2691608	2711661	789624	24	74,135,94,122,126,81,140,154,85,245,63,101,105,224,695,93,148,126,155,125,144,172,203,234,	0,152,395,752,962,1171,2291,2514,2871,3248,3609,4550,4825,5110,6287,8773,9069,9531,9757,10004,10305,11709,12753,19953,
#Partially deleted in new
chr17	2692306	2694154	chr17:2692306-2694154	0	-	2692306	2692306	8553170	5	176,126,81,140,32,	0,264,473,1593,1816,
#Partially deleted in new
chr17	2692860	2692919	chr17:2692860-2692919	3	-	2692860	2692860	5263520	1	59,	0,
#Deleted in new
chr17	2694517	2695603	chr17:2694517-2695603	0	-	2694517	2694517	8553170	4	47,245,63,230,	0,339,700,856,
#Deleted in new
chr17	2695025	2695699	chr17:2695025-2695699	0	-	2695025	2695025	8553170	2	255,326,	0,348,
#Deleted in new
chr17	2695704	2696473	chr17:2695704-2696473	0	-	2695704	2695704	8553170	2	555,40,	0,729,
#Partially deleted in new
chr17	2698547	2701478	chr17:2698547-2701478	0	-	2698547	2701478	789624	5	43,93,105,126,113,	0,1834,2130,2592,2818,
#Deleted in new
chr17	2701113	2701450	chr17:2701113-2701450	0	-	2701113	2701113	8553170	2	152,85,	0,252,
#Partially deleted in new
chr17	2701924	2711792	chr17:2701924-2711792	0	-	2701924	2704550	789624	4	133,172,203,75,	0,1393,2437,9793,
#Partially deleted in new
chr17	2703405	2711198	chr17:2703405-2711198	0	-	2703405	2704550	789624	3	84,203,146,	0,956,7647,
#Partially deleted in new
chr17	2703458	2712663	chr17:2703458-2712663	0	-	2703458	2704550	789624	3	31,203,311,	0,903,8894,
#Deleted in new
chr17	2712308	2712833	chr17:2712308-2712833	3	+	2712308	2712308	789624	2	91,352,	0,173,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	2720800	2723947	chr17:2720800-2723947	3	-	2720800	2720800	8553170	1	3147,	0,
#Partially deleted in new
chr17	2724410	2749504	chr17:2724410-2749504	7	-	2724410	2724410	16724991	4	590,48,153,94,	0,6035,10605,25000,
#Deleted in new
chr17	2748077	2748182	chr17:2748077-2748182	3	-	2748077	2748077	5263520	1	105,	0,
#Deleted in new
chr17	2748077	2748182	chr17:2748077-2748182	3	+	2748077	2748077	8553170	1	105,	0,
#Partially deleted in new
chr17	2755704	3034207	chr17:2755704-3034207	3	+	2755717	3032419	789624	26	63,117,36,85,36,45,33,213,104,79,54,84,101,130,156,72,87,135,138,119,114,115,127,77,39,816,	0,14624,44810,149579,202054,206965,207725,208151,209835,224582,225490,229278,235592,239632,242516,249664,250250,252306,262356,264772,270303,270645,271239,275217,276706,277687,
#Partially deleted in new
chr17	2777055	3034207	chr17:2777055-3034207	1	+	2800527	3032419	789624	25	223,36,85,36,45,33,213,104,79,54,84,101,130,156,72,87,135,138,119,114,115,127,77,39,816,	0,23459,128228,180703,185614,186374,186800,188484,203231,204139,207927,214241,218281,221165,228313,228899,230955,241005,243421,248952,249294,249888,253866,255355,256336,
#Partially deleted in new
chr17	2796437	3037739	chr17:2796437-3037739	1	+	2796527	3032419	789624	25	134,36,85,36,45,33,213,104,79,54,84,101,130,156,72,87,135,138,119,114,115,127,77,39,4348,	0,4077,108846,161321,166232,166992,167418,169102,183849,184757,188545,194859,198899,201783,208931,209517,211573,221623,224039,229570,229912,230506,234484,235973,236954,
#Partially deleted in new
chr17	2796437	3037739	chr17:2796437-3037739	1	+	2796527	3032419	789624	24	134,36,85,36,33,213,104,79,54,84,101,130,156,72,87,135,138,119,114,115,127,77,39,4348,	0,4077,108846,161321,166992,167418,169102,183849,184757,188545,194859,198899,201783,208931,209517,211573,221623,224039,229570,229912,230506,234484,235973,236954,
#Partially deleted in new
chr17	2796481	3034771	chr17:2796481-3034771	1	+	2796527	3032419	789624	26	90,36,85,36,45,33,213,104,79,54,84,101,130,156,72,87,135,138,119,114,115,127,77,39,821,20,	0,4033,108802,161277,166188,166948,167374,169058,183805,184713,188501,194815,198855,201739,208887,209473,211529,221579,223995,229526,229868,230462,234440,235929,236910,238270,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	2962247	2965895	chr17:2962247-2965895	3	-	2962247	2962247	789624	3	996,86,1464,	0,1632,2184,
#Partially deleted in new
chr17	2991344	3008090	chr17:2991344-3008090	0	+	2991344	2991344	8553170	6	53,130,156,100,87,80,	0,3992,6876,13996,14610,16666,
#Partially deleted in new
chr17	3008100	3026248	chr17:3008100-3026248	0	+	3008100	3008100	8553170	4	45,138,119,241,	0,9960,12376,17907,
#Deleted in new
chr17	3033080	3037738	chr17:3033080-3037738	0	+	3033080	3033080	8553170	1	4658,	0,
#Deleted in new
chr17	3034229	3035180	chr17:3034229-3035180	0	+	3034229	3034229	8553170	2	171,487,	0,464,
#Deleted in new
chr17	3062668	3063607	chr17:3062668-3063607	3	-	3062668	3063607	789624	1	939,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	3088483	3104422	chr17:3088483-3104422	1	-	3092057	3092996	789624	2	4563,319,	0,15620,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	3088483	3104422	chr17:3088483-3104422	3	-	3092057	3092996	789624	2	4563,324,	0,15615,
#Deleted in new
chr17	3092057	3092996	chr17:3092057-3092996	1	-	3092057	3092996	789624	1	939,	0,
#Deleted in new
chr17	3116426	3117374	chr17:3116426-3117374	7	+	3116426	3116426	16724991	1	948,	0,
#Deleted in new
chr17	3126583	3127581	chr17:3126583-3127581	3	-	3126609	3127551	789624	1	998,	0,
#Deleted in new
chr17	3153888	3154882	chr17:3153888-3154882	3	-	3153888	3154882	8553170	1	994,	0,
#Deleted in new
chr17	3197518	3198448	chr17:3197518-3198448	3	+	3197518	3198448	789624	1	930,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	3207538	3218896	chr17:3207538-3218896	3	+	3215620	3216550	789624	2	462,3281,	0,8077,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	3207538	3215194	chr17:3207538-3215194	0	+	3207538	3207538	8553170	3	462,418,2728,	0,1042,4928,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	3208580	3218896	chr17:3208580-3218896	1	+	3215620	3216550	789624	3	418,133,3281,	0,3886,7035,
#Deleted in new
chr17	3215620	3216550	chr17:3215620-3216550	1	+	3215620	3216550	789624	1	930,	0,
#Deleted in new
chr17	3240675	3241614	chr17:3240675-3241614	5	+	3240675	3240675	16724991	1	939,	0,
#Deleted in new
chr17	3265610	3266541	chr17:3265610-3266541	7	+	3265610	3265610	16724991	1	931,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	3276941	3278974	chr17:3276941-3278974	1	-	3277969	3278917	789624	1	2033,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	3277198	3284380	chr17:3277198-3284380	3	-	3277969	3278917	789624	2	1725,23,	0,7159,
#Deleted in new
chr17	3277898	3278974	chr17:3277898-3278974	1	-	3277969	3278935	789624	1	1076,	0,
#Partially deleted in new
chr17	3278774	3386293	chr17:3278774-3386293	0	-	3278774	3278917	789624	5	149,78,94,96,169,	0,301,57258,105029,107350,
#Partially deleted in new
chr17	3278825	3386317	chr17:3278825-3386317	0	-	3278825	3278917	789624	4	98,78,94,193,	0,250,57207,107299,
#Partially deleted in new
chr17	3284398	3386306	chr17:3284398-3386306	0	-	3284398	3284398	8553170	3	153,98,182,	0,51630,101726,
#Deleted in new
chr17	3291016	3298360	chr17:3291016-3298360	3	-	3291634	3292582	789624	2	1572,78,	0,7266,
#Deleted in new
chr17	3291634	3292600	chr17:3291634-3292600	1	-	3291634	3292600	789624	1	966,	0,
#Deleted in new
chr17	3309985	3311446	chr17:3309985-3311446	7	+	3309985	3309985	16724991	1	1461,	0,
#Deleted in new
chr17	3310310	3311216	chr17:3310310-3311216	5	+	3310310	3310310	16724991	1	906,	0,
#Deleted in new
chr17	3311217	3311934	chr17:3311217-3311934	7	+	3311217	3311217	16724991	1	717,	0,
#Partially deleted in new
chr17	3377526	3377602	chr17:3377526-3377602	7	-	3377526	3377526	16724991	1	76,	0,
#Partially deleted in new
chr17	3385929	3386874	chr17:3385929-3386874	3	+	3385929	3386874	789624	1	945,	0,
#Partially deleted in new
chr17	3397103	3398410	chr17:3397103-3398410	3	-	3397465	3398410	789624	1	1307,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	3411369	3424070	chr17:3411369-3424070	1	+	3420585	3421533	789624	3	115,194,3491,	0,608,9210,
#Partially deleted in new
chr17	3420567	3421533	chr17:3420567-3421533	3	+	3420567	3421533	789624	1	966,	0,
#Partially deleted in new
chr17	3420567	3421533	chr17:3420567-3421533	1	+	3420585	3421533	789624	1	966,	0,
#Deleted in new
chr17	3432869	3433841	chr17:3432869-3433841	3	-	3432869	3433841	789624	1	972,	0,
#Deleted in new
chr17	3439922	3441844	chr17:3439922-3441844	3	-	3439922	3439922	8553170	1	1922,	0,
#Partially deleted in new
chr17	3440018	3471797	chr17:3440018-3471797	1	-	3440146	3469325	789624	8	320,98,130,343,96,61,116,52,	0,3155,6453,8788,22464,22688,29264,31727,
#Partially deleted in new
chr17	3440018	3471746	chr17:3440018-3471746	1	-	3440146	3469325	789624	9	320,98,130,343,96,61,129,116,164,	0,3155,6453,8788,22464,22688,27407,29264,31564,
#Partially deleted in new
chr17	3440018	3471787	chr17:3440018-3471787	1	-	3440146	3469325	789624	9	320,98,130,343,96,61,129,116,106,	0,3155,6453,8788,22464,22688,27407,29264,31663,
#Partially deleted in new
chr17	3440018	3472134	chr17:3440018-3472134	1	-	3440146	3469325	789624	9	320,98,130,343,96,61,129,116,411,	0,3155,6453,8788,22464,22688,27407,29264,31705,
#Partially deleted in new
chr17	3440018	3471826	chr17:3440018-3471826	1	-	3440146	3469325	789624	9	320,98,130,343,96,61,129,116,81,	0,3155,6453,8788,22464,22688,27407,29264,31727,
#Partially deleted in new
chr17	3440021	3513852	chr17:3440021-3513852	3	-	3440146	3469325	789624	9	317,98,130,343,96,61,81,116,441,	0,3152,6450,8785,22461,22685,27452,29261,73390,
#Partially deleted in new
chr17	3440242	3471739	chr17:3440242-3471739	1	-	3440330	3469325	789624	8	96,130,343,96,61,129,116,309,	0,6229,8564,22240,22464,27183,29040,31188,
#Partially deleted in new
chr17	3446555	3471801	chr17:3446555-3471801	0	-	3446555	3462726	789624	7	46,343,96,61,52,116,120,	0,2251,15927,16151,20918,22727,25126,
#Partially deleted in new
chr17	3448811	3469315	chr17:3448811-3469315	0	-	3448811	3468886	789624	6	338,96,61,81,63,33,	0,13671,13895,18662,20023,20471,
#Partially deleted in new
chr17	3448819	3471824	chr17:3448819-3471824	0	-	3448819	3462726	789624	4	330,96,61,79,	0,13663,13887,22926,
#Partially deleted in new
chr17	3448986	3472298	chr17:3448986-3472298	0	-	3448986	3469325	789624	6	163,96,61,129,116,432,	0,13496,13720,18439,20296,22880,
#Partially deleted in new
chr17	3449010	3468357	chr17:3449010-3468357	0	-	3449010	3462726	789624	5	139,96,61,129,152,	0,13472,13696,18415,19195,
#Partially deleted in new
chr17	3462742	3472341	chr17:3462742-3472341	0	-	3462742	3469325	789624	4	25,81,116,596,	0,4731,6540,9003,
#Partially deleted in new
chr17	3469316	3513768	chr17:3469316-3513768	0	-	3469316	3469325	8553170	2	82,158,	0,44294,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	3472373	3476395	chr17:3472373-3476395	0	+	3476159	3476395	789624	3	89,212,262,	0,3044,3760,
#Partially deleted in new
chr17	3474052	3499088	chr17:3474052-3499088	1	+	3476159	3499088	0	7	122,262,196,94,108,110,198,	0,2081,7550,9446,15182,20297,24838,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	3476001	3503419	chr17:3476001-3503419	3	+	3476159	3499088	0	6	394,196,94,108,110,4529,	0,5601,7497,13233,18348,22889,
#Partially deleted in new
chr17	3476023	3489251	chr17:3476023-3489251	0	+	3476159	3481632	789624	4	277,196,94,17,	0,5579,7475,13211,
#Partially deleted in new
chr17	3510501	3535677	chr17:3510501-3535677	0	-	3521025	3535677	789624	12	3510,80,113,275,67,107,74,102,159,177,281,105,	0,4091,5955,8074,10471,13696,16352,17523,18335,19525,22155,25071,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr17	3510502	3546715	chr17:3510502-3546715	1	-	3513916	3546715	789624	17	3512,80,113,275,67,166,74,102,159,177,281,141,177,155,87,105,71,	0,4090,5954,8073,10470,13695,16351,17522,18334,19524,22154,25070,32019,32971,34076,34664,36142,
#Partially deleted in new
chr17	3513189	3557805	chr17:3513189-3557805	1	-	3513916	3554850	789624	18	825,80,113,275,67,166,74,102,159,177,281,141,177,155,87,105,121,130,	0,1403,3267,5386,7783,11008,13664,14835,15647,16837,19467,22383,29332,30284,31389,31977,41542,44486,
#Partially deleted in new
chr17	3513189	3528988	chr17:3513189-3528988	0	-	3518738	3528988	789624	7	825,80,113,275,74,102,152,	0,1403,3267,5386,13664,14835,15647,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr17	3513820	3557767	chr17:3513820-3557767	0	-	3546755	3554850	789624	19	194,80,113,275,67,166,74,102,159,177,281,141,177,155,87,105,160,121,92,	0,772,2636,4755,7152,10377,13033,14204,15016,16206,18836,21752,28701,29653,30758,31346,32824,40911,43855,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr17	3513820	3557767	chr17:3513820-3557767	0	-	3546755	3554850	789624	20	194,80,113,275,67,107,74,102,159,177,281,141,77,177,155,87,105,160,121,92,	0,772,2636,4755,7152,10377,13033,14204,15016,16206,18836,21752,25748,28701,29653,30758,31346,32824,40911,43855,
#Partially deleted in new
chr17	3513845	3557995	chr17:3513845-3557995	3	-	3513916	3554850	789624	18	166,80,113,275,67,166,74,102,159,177,281,141,177,155,87,105,121,320,	0,747,2611,4730,7127,10352,13008,14179,14991,16181,18811,21727,28676,29628,30733,31321,40886,43830,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr17	3514065	3557805	chr17:3514065-3557805	1	-	3514572	3554850	789624	17	607,113,275,67,166,74,102,159,177,281,141,177,155,87,105,121,130,	0,2391,4510,6907,10132,12788,13959,14771,15961,18591,21507,28456,29408,30513,31101,40666,43610,
#Deleted in new
chr17	3526872	3530257	chr17:3526872-3530257	0	-	3526872	3526872	8553170	4	55,102,159,231,	0,1152,1964,3154,
#Deleted in new
chr17	3527696	3530112	chr17:3527696-3530112	0	-	3527696	3527696	8553170	3	430,159,86,	0,1140,2330,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	3552210	3557806	chr17:3552210-3557806	0	-	3552210	3552210	8553170	2	2642,131,	0,5465,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr17	3565443	3595831	chr17:3565443-3595831	1	-	3566814	3592350	789624	16	1544,116,128,323,67,166,71,93,159,180,299,141,153,167,317,168,	0,6080,6678,8189,11682,12154,15013,17894,20324,22744,24363,24808,25520,25743,26623,30220,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr17	3565443	3597098	chr17:3565443-3597098	1	-	3566814	3592350	789624	16	1544,116,128,323,67,166,71,93,159,180,299,141,153,167,317,181,	0,6080,6678,8189,11682,12154,15013,17894,20324,22744,24363,24808,25520,25743,26623,31474,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr17	3565443	3609411	chr17:3565443-3609411	3	-	3566814	3592350	789624	17	1544,116,128,323,67,166,71,93,159,180,299,141,153,167,317,139,103,	0,6080,6678,8189,11682,12154,15013,17894,20324,22744,24363,24808,25520,25743,26623,42983,43865,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	3565458	3593159	chr17:3565458-3593159	0	-	3577791	3592350	8553170	15	1529,116,128,323,67,213,71,93,159,180,299,141,153,167,1093,	0,6065,6663,8174,11667,12139,14998,17879,20309,22729,24348,24793,25505,25728,26608,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	3565793	3592877	chr17:3565793-3592877	1	-	3566814	3592350	789624	15	1194,116,128,323,67,166,71,93,159,180,299,141,153,167,811,	0,5730,6328,7839,11332,11804,14663,17544,19974,22394,24013,24458,25170,25393,26273,
#Partially deleted in new
chr17	3566777	3592367	chr17:3566777-3592367	1	-	3566814	3592350	789624	16	210,116,128,323,67,166,71,93,159,180,33,299,141,153,167,301,	0,4746,5344,6855,10348,10820,13679,16560,18990,21410,22154,23029,23474,24186,24409,25289,
#Partially deleted in new
chr17	3566777	3592367	chr17:3566777-3592367	0	-	3566777	3566777	8553170	14	210,116,128,323,67,166,71,93,159,180,299,141,390,301,	0,4746,5344,6855,10348,10820,13679,16560,18990,21410,23029,23474,24186,25289,
#Partially deleted in new
chr17	3566812	3592383	chr17:3566812-3592383	1	-	3566814	3592350	789624	15	175,116,128,323,67,166,71,93,159,150,299,141,153,167,317,	0,4711,5309,6820,10313,10785,13644,16525,18955,21405,22994,23439,24151,24374,25254,
#Partially deleted in new
chr17	3566814	3592350	chr17:3566814-3592350	1	-	3566814	3592350	789624	14	173,116,128,323,67,166,71,93,159,299,141,153,167,284,	0,4709,5307,6818,10311,10783,13642,16523,18953,22992,23437,24149,24372,25252,
#Partially deleted in new
chr17	3573821	3577888	chr17:3573821-3577888	0	-	3573821	3573821	8553170	3	134,67,291,	0,3304,3776,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	3577954	3578853	chr17:3577954-3578853	3	-	3577954	3577954	8553170	2	270,290,	0,609,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	3585148	3636249	chr17:3585148-3636249	3	-	3610559	3636219	789624	14	778,180,299,141,153,167,317,1664,201,176,153,184,142,198,	0,3039,4658,5103,5815,6038,6918,24160,30188,36088,38190,38899,45056,50903,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	3601760	3602272	chr17:3601760-3602272	3	-	3601760	3601760	8553170	1	512,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	3608261	3636322	chr17:3608261-3636322	3	-	3610559	3636219	789624	7	2711,201,176,153,184,142,271,	0,7075,12975,15077,15786,21943,27790,
#Partially deleted in new
chr17	3619255	3619913	chr17:3619255-3619913	7	-	3619255	3619255	16724991	2	183,161,	0,497,
#Partially deleted in new
chr17	3636467	3661538	chr17:3636467-3661538	3	+	3640206	3660369	789624	12	364,210,80,79,85,104,132,100,120,171,118,1303,	0,639,3720,10976,12379,18530,18753,20019,20208,21537,23390,23768,
#Partially deleted in new
chr17	3636478	3661542	chr17:3636478-3661542	1	+	3640206	3660734	789624	13	230,210,80,79,85,104,132,100,120,171,118,115,926,	0,628,3709,10965,12368,18519,18742,20008,20197,21526,23379,23757,24138,
#Partially deleted in new
chr17	3636724	3648931	chr17:3636724-3648931	0	+	3640206	3648931	789624	5	163,210,80,79,85,	0,382,3463,10719,12122,
#Partially deleted in new
chr17	3636728	3656526	chr17:3636728-3656526	0	+	3655332	3656526	789624	5	103,210,80,132,40,	0,378,3459,18492,19758,
#Partially deleted in new
chr17	3636746	3647604	chr17:3636746-3647604	0	+	3636746	3636746	8553170	4	85,210,80,161,	0,360,3441,10697,
#Partially deleted in new
chr17	3636757	3655263	chr17:3636757-3655263	0	+	3640206	3655019	789624	6	74,210,80,79,104,43,	0,349,3430,10686,18240,18463,
#Partially deleted in new
chr17	3636759	3655088	chr17:3636759-3655088	0	+	3636759	3636759	8553170	5	72,210,79,85,91,	0,347,10684,12087,18238,
#Partially deleted in new
chr17	3636761	3656551	chr17:3636761-3656551	0	+	3655332	3656551	789624	5	70,210,104,132,65,	0,345,18236,18459,19725,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	3637103	3650519	chr17:3637103-3650519	1	+	3640206	3650317	789624	5	213,80,79,85,346,	0,3084,10340,11743,13070,
#Partially deleted in new
chr17	3640146	3656513	chr17:3640146-3656513	0	+	3640206	3656513	789624	6	121,79,85,104,132,27,	0,7297,8700,14851,15074,16340,
#Deleted in new
chr17	3655620	3658092	chr17:3655620-3658092	3	-	3655620	3655620	8553170	3	342,66,466,	0,1235,2006,
#Partially deleted in new
chr17	3662895	3668679	chr17:3662895-3668679	1	-	3663747	3668526	789624	3	990,120,192,	0,1783,5592,
#Partially deleted in new
chr17	3662901	3668682	chr17:3662901-3668682	3	-	3663747	3668526	0	4	984,78,120,195,	0,1293,1777,5586,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	3663062	3696194	chr17:3663062-3696194	3	-	3672453	3696005	789624	15	823,78,120,3436,195,83,94,134,139,81,97,76,72,151,326,	0,1132,1616,5995,16527,18833,24949,25563,26429,27007,27364,27542,27893,28581,32806,
#Deleted in new
chr17	3665219	3665702	chr17:3665219-3665702	7	+	3665219	3665219	16724991	1	483,	0,
#Deleted in new
chr17	3668814	3669665	chr17:3668814-3669665	3	+	3669146	3669479	789624	2	85,568,	0,283,
#Deleted in new
chr17	3668821	3669668	chr17:3668821-3669668	1	+	3669146	3669479	789624	2	191,571,	0,276,
#Partially deleted in new
chr17	3672198	3696096	chr17:3672198-3696096	1	-	3672453	3696005	789624	12	295,195,83,94,134,136,81,97,76,72,151,228,	0,7391,9697,15813,16427,17293,17871,18228,18406,18757,19445,23670,
#Partially deleted in new
chr17	3673226	3696404	chr17:3673226-3696404	3	-	3673867	3696005	789624	12	651,195,83,94,134,139,81,97,76,72,151,536,	0,6363,8669,14785,15399,16265,16843,17200,17378,17729,18417,22642,
#Partially deleted in new
chr17	3673226	3696096	chr17:3673226-3696096	1	-	3673867	3696005	789624	12	651,195,83,94,134,136,81,97,76,72,151,228,	0,6363,8669,14785,15399,16265,16843,17200,17378,17729,18417,22642,
#Partially deleted in new
chr17	3673226	3696033	chr17:3673226-3696033	1	-	3673867	3696005	789624	11	651,195,83,94,134,136,81,97,76,151,165,	0,6363,8669,14785,15399,16265,16843,17200,17378,18417,22642,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	3673229	3682871	chr17:3673229-3682871	0	-	3673229	3673229	8553170	4	648,148,195,976,	0,2949,6360,8666,
#Partially deleted in new
chr17	3673244	3696216	chr17:3673244-3696216	1	-	3673867	3696005	789624	11	633,195,83,94,134,139,81,97,76,151,348,	0,6345,8651,14767,15381,16247,16825,17182,17360,18399,22624,
#Partially deleted in new
chr17	3673250	3688040	chr17:3673250-3688040	0	-	3679724	3688040	789624	3	627,195,29,	0,6339,14761,
#Partially deleted in new
chr17	3673599	3692002	chr17:3673599-3692002	1	-	3673867	3691823	789624	10	278,195,83,94,134,139,81,97,76,359,	0,5990,8296,14412,15026,15892,16470,16827,17005,18044,
#Partially deleted in new
chr17	3679610	3691773	chr17:3679610-3691773	0	-	3679610	3691773	789624	9	174,83,94,51,81,97,76,72,130,	0,2285,8401,9015,10459,10816,10994,11345,12033,
#Deleted in new
chr17	3685519	3690649	chr17:3685519-3690649	0	-	3685519	3685519	8553170	6	61,94,51,81,97,45,	0,2492,3106,4550,4907,5085,
#Partially deleted in new
chr17	3690083	3696240	chr17:3690083-3696240	0	-	3690083	3690083	8553170	5	440,76,72,151,372,	0,521,872,1560,5785,
#Partially deleted in new
chr17	3714627	3801243	chr17:3714627-3801243	3	-	3714846	3801144	789624	31	315,111,96,96,57,108,64,78,80,99,133,74,129,164,131,131,225,141,143,145,68,151,154,152,116,165,118,68,92,121,133,	0,2060,5679,8660,9060,13291,13477,14850,16476,17740,20189,25177,28861,31136,33294,35724,37022,38662,39155,40489,41202,42356,43078,44774,45544,46385,46775,47287,49241,62912,86483,
#Partially deleted in new
chr17	3714627	3723837	chr17:3714627-3723837	0	-	3714627	3714627	8553170	4	315,111,96,150,	0,2060,5679,9060,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	3714635	3720619	chr17:3714635-3720619	0	-	3714635	3714635	8553170	3	307,111,313,	0,2052,5671,
#Partially deleted in new
chr17	3714652	3718379	chr17:3714652-3718379	0	-	3714652	3714652	8553170	2	290,1692,	0,2035,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	3714665	3728474	chr17:3714665-3728474	0	-	3714665	3714665	8553170	7	277,111,96,96,57,108,370,	0,2022,5641,8622,9022,13253,13439,
#Partially deleted in new
chr17	3714691	3723854	chr17:3714691-3723854	0	-	3714691	3714691	8553170	5	251,111,96,96,167,	0,1996,5615,8596,8996,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	3723902	3726699	chr17:3723902-3726699	3	+	3723935	3726332	0	1	2797,	0,
#Partially deleted in new
chr17	3724317	3738953	chr17:3724317-3738953	0	-	3724317	3724317	8553170	7	427,108,64,80,99,133,93,	0,3601,3787,6786,8050,10499,14543,
#Partially deleted in new
chr17	3728013	3743540	chr17:3728013-3743540	0	-	3728013	3743540	789624	6	13,64,80,133,74,52,	0,91,3090,6803,11791,15475,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	3729360	3730493	chr17:3729360-3730493	3	+	3729360	3729360	8553170	2	292,106,	0,1027,
#Partially deleted in new
chr17	3751869	3754696	chr17:3751869-3754696	0	-	3751869	3751869	8553170	4	5,141,143,65,	0,1420,1913,2762,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	3802164	3846251	chr17:3802164-3846251	3	-	3813043	3846223	789624	13	11115,162,155,310,104,100,109,77,129,126,106,66,211,	0,12157,13951,16098,19084,19788,22777,23602,23922,27078,37935,40921,43876,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	3802164	3803382	chr17:3802164-3803382	0	-	3802164	3802164	8553170	2	317,201,	0,1017,
#Partially deleted in new
chr17	3811522	3825021	chr17:3811522-3825021	0	-	3824063	3825021	789624	8	1757,162,155,310,104,100,33,80,	0,2799,4593,6740,9726,10430,12537,13419,
#Partially deleted in new
chr17	3811527	3829291	chr17:3811527-3829291	0	-	3811527	3811527	8553170	10	1752,162,155,310,104,100,1258,77,129,49,	0,2794,4588,6735,9721,10425,12265,14239,14559,17715,
#Deleted in new
chr17	3812539	3813250	chr17:3812539-3813250	0	-	3812545	3813250	789624	2	115,134,	0,577,
#Partially deleted in new
chr17	3818262	3822456	chr17:3818262-3822456	0	-	3818262	3818262	8553170	3	310,104,504,	0,2986,3690,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	3822503	3826117	chr17:3822503-3826117	0	-	3822503	3822503	8553170	5	395,33,109,77,31,	0,1556,2438,3263,3583,
#Partially deleted in new
chr17	3860314	3893044	chr17:3860314-3893044	3	-	3862210	3885687	0	16	1969,104,129,88,74,54,200,89,22,37,134,52,54,48,403,106,	0,5593,9172,9486,12239,13094,15908,20031,21312,22213,22727,23114,23569,24065,25013,32624,
#Partially deleted in new
chr17	3860314	3890743	chr17:3860314-3890743	1	-	3862210	3890730	789624	16	1969,104,129,88,74,54,200,89,22,37,134,52,54,48,403,51,	0,5593,9172,9486,12239,13094,15908,20031,21312,22213,22727,23114,23569,24065,25013,30378,
#Partially deleted in new
chr17	3865156	3893044	chr17:3865156-3893044	1	-	3865903	3885687	0	16	855,129,88,74,54,200,89,22,114,37,134,52,54,48,403,106,	0,4330,4644,7397,8252,11066,15189,16470,17100,17371,17885,18272,18727,19223,20171,27782,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	3878830	3894891	chr17:3878830-3894891	0	-	3878830	3878830	8553170	8	1604,938,134,52,54,48,403,665,	0,2796,4211,4598,5053,5549,6497,15396,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	3896591	3916500	chr17:3896591-3916500	3	-	3897813	3916225	789624	12	1288,102,66,91,128,142,81,97,70,72,148,412,	0,1417,1892,2342,3042,6610,6959,7336,7738,8266,8628,19497,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	3896591	3916452	chr17:3896591-3916452	0	-	3896591	3896591	8553170	11	1288,102,66,91,128,142,474,70,72,148,364,	0,1417,1892,2342,3042,6610,6959,7738,8266,8628,19497,
#Deleted in new
chr17	3903911	3904743	chr17:3903911-3904743	0	-	3903911	3903911	8553170	2	113,414,	0,418,
#Partially deleted in new
chr17	3905262	3916476	chr17:3905262-3916476	0	-	3915941	3916225	789624	3	105,633,388,	0,10083,10826,
#Partially deleted in new
chr17	3923869	3964464	chr17:3923869-3964464	1	-	3925432	3964291	789624	22	1572,101,118,118,134,86,203,221,336,219,126,132,103,89,465,86,81,139,105,83,18,291,	0,4357,4793,5458,6431,11322,12397,13546,17101,17566,18736,19521,20834,21190,23521,26641,26823,27381,27711,29477,29823,40304,
#Partially deleted in new
chr17	3923874	3964419	chr17:3923874-3964419	1	-	3925432	3964291	789624	23	927,46,101,118,118,134,86,203,221,336,219,126,132,103,89,465,86,81,139,105,83,18,246,	0,1521,4352,4788,5453,6426,11317,12392,13541,17096,17561,18731,19516,20829,21185,23516,26636,26818,27376,27706,29472,29818,40299,
#Partially deleted in new
chr17	3923874	3964419	chr17:3923874-3964419	3	-	3925421	3964291	789624	21	1567,118,118,134,86,203,221,336,219,126,132,103,89,465,86,81,139,105,83,18,246,	0,4788,5453,6426,11317,12392,13541,17096,17561,18731,19516,20829,21185,23516,26636,26818,27376,27706,29472,29818,40299,
#Partially deleted in new
chr17	3925046	3928620	chr17:3925046-3928620	0	-	3925046	3925046	8553170	2	395,381,	0,3193,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	3925259	3930871	chr17:3925259-3930871	0	-	3925259	3925259	8553170	4	182,118,118,571,	0,3403,4068,5041,
#Partially deleted in new
chr17	3925290	3964346	chr17:3925290-3964346	1	-	3925377	3964291	789624	22	151,88,118,118,134,86,203,221,336,219,126,132,103,89,465,86,81,139,105,83,18,173,	0,2949,3372,4037,5010,9901,10976,12125,15680,16145,17315,18100,19413,19769,22100,25220,25402,25960,26290,28056,28402,38883,
#Partially deleted in new
chr17	3925290	3964291	chr17:3925290-3964291	1	-	3925421	3964291	789624	23	151,58,101,118,118,134,86,203,221,336,219,126,132,103,89,465,86,81,139,105,83,18,118,	0,2690,2936,3372,4037,5010,9901,10976,12125,15680,16145,17315,18100,19413,19769,22100,25220,25402,25960,26290,28056,28402,38883,
#Partially deleted in new
chr17	3925290	3930371	chr17:3925290-3930371	0	-	3925432	3930371	789624	6	151,58,88,118,118,71,	0,2690,2949,3372,4037,5010,
#Partially deleted in new
chr17	3925345	3964415	chr17:3925345-3964415	1	-	3925421	3964291	789624	21	93,118,118,134,86,203,221,336,219,126,132,103,89,465,86,81,139,105,83,18,242,	0,3317,3982,4955,9846,10921,12070,15625,16090,17260,18045,19358,19714,22045,25165,25347,25905,26235,28001,28347,38828,
#Partially deleted in new
chr17	3925377	3930371	chr17:3925377-3930371	0	-	3925377	3930371	789624	5	64,58,118,118,71,	0,2603,3285,3950,4923,
#Deleted in new
chr17	3928157	3930427	chr17:3928157-3930427	0	-	3928157	3928157	8553170	3	623,118,127,	0,1170,2143,
#Partially deleted in new
chr17	3929327	3937087	chr17:3929327-3937087	0	-	3929327	3929327	8553170	4	118,134,86,821,	0,973,5864,6939,
#Partially deleted in new
chr17	3934935	3936352	chr17:3934935-3936352	0	-	3934935	3934935	8553170	2	342,86,	0,1331,
#Partially deleted in new
chr17	3941438	3945376	chr17:3941438-3945376	0	-	3941438	3941438	8553170	5	216,126,132,103,317,	0,1167,1952,3265,3621,
#Partially deleted in new
chr17	3953280	3964236	chr17:3953280-3964236	0	-	3953280	3953280	8553170	3	149,18,63,	0,412,10893,
#Partially deleted in new
chr17	3977102	3981899	chr17:3977102-3981899	3	+	3977102	3977102	8553170	2	92,457,	0,4340,
#Partially deleted in new
chr17	4004444	4143020	chr17:4004444-4143020	3	-	4006889	4142895	789624	55	2526,72,154,166,99,169,144,360,136,101,192,120,200,133,175,278,140,151,152,263,166,139,130,162,120,165,469,94,80,241,149,202,82,167,123,122,160,115,68,134,170,101,216,112,149,92,99,179,117,211,200,172,195,145,479,	0,4438,5159,9004,9645,9902,11878,12926,13391,15224,16684,18264,20474,27681,28383,29570,37984,39779,45263,46336,47526,49612,51771,53549,54726,58308,59916,62002,62718,66239,68163,69705,70652,70818,72192,72423,73438,76931,77992,81225,82041,82989,84233,86274,91386,92164,97872,100188,101248,105208,108164,109854,112527,119462,138097,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	4008259	4017580	chr17:4008259-4017580	0	-	4008259	4008259	8553170	5	1498,166,99,169,1258,	0,5189,5830,6087,8063,
#Partially deleted in new
chr17	4014377	4017504	chr17:4014377-4017504	0	-	4016708	4017504	789624	4	138,144,142,134,	0,1945,2255,2993,
#Partially deleted in new
chr17	4017647	4020012	chr17:4017647-4020012	0	-	4017647	4017647	8553170	3	83,136,344,	0,188,2021,
#Partially deleted in new
chr17	4022415	4064534	chr17:4022415-4064534	0	-	4054158	4064534	789624	15	413,200,133,175,278,140,151,152,263,166,139,162,120,165,174,	0,2503,9710,10412,11599,20013,21808,27292,28365,29555,31641,35578,36755,40337,41945,
#Partially deleted in new
chr17	4022416	4062798	chr17:4022416-4062798	0	-	4022645	4062798	789624	15	412,200,133,175,278,140,151,152,263,166,139,130,162,120,46,	0,2502,9709,10411,11598,20012,21807,27291,28364,29554,31640,33799,35577,36754,40336,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	4024918	4033359	chr17:4024918-4033359	0	-	4024918	4024918	8553170	3	200,133,532,	0,7207,7909,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	4033530	4070916	chr17:4033530-4070916	0	-	4033530	4033530	8553170	15	762,140,151,152,263,166,139,130,162,120,165,469,94,80,233,	0,8898,10693,16177,17250,18440,20526,22685,24463,25640,29222,30830,32916,33632,37153,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	4056755	4056876	chr17:4056755-4056876	7	-	4056755	4056755	16724991	1	121,	0,
#Partially deleted in new
chr17	4064798	4072827	chr17:4064798-4072827	0	-	4064798	4064798	8553170	5	31,94,80,114,220,	0,1648,2364,6012,7809,
#Partially deleted in new
chr17	4070778	4075180	chr17:4070778-4075180	0	-	4071434	4075180	789624	5	146,108,149,202,84,	0,560,1829,3371,4318,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr17	4075951	4143020	chr17:4075951-4143020	0	-	4075951	4075951	8553170	21	808,122,160,115,71,134,170,101,216,112,149,92,99,179,117,211,200,172,195,145,479,	0,916,1931,5424,6485,9718,10534,11482,12726,14767,19879,20657,26365,28681,29741,33701,36657,38347,41020,47955,66590,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	4143167	4157085	chr17:4143167-4157085	0	+	4149976	4157082	789624	4	146,141,187,220,	0,6723,11506,13698,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	4143210	4157572	chr17:4143210-4157572	1	+	4149976	4157082	789624	4	553,141,187,707,	0,6680,11463,13655,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	4143255	4157697	chr17:4143255-4157697	3	+	4143755	4157082	789624	4	750,141,187,832,	0,6635,11418,13610,
#Partially deleted in new
chr17	4143701	4187310	chr17:4143701-4187310	1	+	4149976	4187284	789624	4	62,141,187,105,	0,6189,10972,43504,
#Partially deleted in new
chr17	4149890	4157455	chr17:4149890-4157455	0	+	4149890	4149890	8553170	4	141,79,187,590,	0,1053,4783,6975,
#Partially deleted in new
chr17	4163906	4263977	chr17:4163906-4263977	1	-	4167778	4263941	789624	25	4005,91,147,125,91,148,177,201,157,119,169,154,99,229,98,200,69,205,166,150,124,136,119,193,46,	0,5291,6808,8649,9447,10002,13219,14950,15814,17347,18274,19491,19905,20911,25475,31071,31496,33466,42414,44026,45917,53076,71865,78349,100025,
#Deleted in new
chr17	4163909	4164713	chr17:4163909-4164713	3	+	4163909	4163909	8553170	2	464,48,	0,756,
#Partially deleted in new
chr17	4163956	4263995	chr17:4163956-4263995	0	-	4167778	4263941	8553170	26	217,2514,91,147,125,91,148,177,201,157,119,169,154,99,229,98,200,69,205,166,150,124,136,119,193,64,	0,1441,5241,6758,8599,9397,9952,13169,14900,15764,17297,18224,19441,19855,20861,25425,31021,31446,33416,42364,43976,45867,53026,71815,78299,99975,
#Partially deleted in new
chr17	4165073	4263847	chr17:4165073-4263847	1	-	4167778	4263730	789624	25	2838,91,147,125,91,148,177,201,157,119,169,154,99,229,98,200,69,205,166,150,124,136,119,193,253,	0,4124,5641,7482,8280,8835,12052,13783,14647,16180,17107,18324,18738,19744,24308,29904,30329,32299,41247,42859,44750,51909,70698,77182,98521,
#Partially deleted in new
chr17	4166273	4263956	chr17:4166273-4263956	3	-	4167778	4263941	789624	25	1638,91,147,125,91,148,177,201,157,119,172,154,99,229,98,200,69,205,166,150,124,136,119,193,25,	0,2924,4441,6282,7080,7635,10852,12583,13447,14980,15907,17124,17538,18544,23108,28704,29129,31099,40047,41659,43550,50709,69498,75982,97658,
#Partially deleted in new
chr17	4167835	4263956	chr17:4167835-4263956	0	-	4217111	4263941	789624	24	76,91,147,125,91,148,177,201,157,119,172,154,99,229,98,200,69,205,166,150,124,136,193,25,	0,1362,2879,4720,5518,6073,9290,11021,11885,13418,14345,15562,15976,16982,21546,27142,27567,29537,38485,40097,41988,49147,74420,96096,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	4168150	4170861	chr17:4168150-4170861	0	-	4169193	4170861	789624	3	42,476,147,	0,662,2564,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	4177881	4180436	chr17:4177881-4180436	0	-	4177881	4177881	8553170	1	2555,	0,
#Deleted in new
chr17	4181025	4182298	chr17:4181025-4182298	0	-	4181025	4181025	8553170	2	347,118,	0,1155,
#Partially deleted in new
chr17	4183525	4187109	chr17:4183525-4187109	0	-	4183525	4184872	789624	4	26,99,229,216,	0,286,1292,3368,
#Partially deleted in new
chr17	4184863	4191335	chr17:4184863-4191335	0	-	4184863	4184863	8553170	3	183,98,149,	0,4518,6323,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	4186325	4186424	chr17:4186325-4186424	3	+	4186325	4186325	8553170	1	99,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	4186459	4188869	chr17:4186459-4188869	0	-	4186459	4186459	8553170	1	2410,	0,
#Partially deleted in new
chr17	4194460	4242450	chr17:4194460-4242450	0	-	4194460	4194460	8553170	9	717,69,205,166,150,124,136,119,195,	0,942,2912,11860,13472,15363,22522,41311,47795,
#Partially deleted in new
chr17	4195454	4208132	chr17:4195454-4208132	0	-	4195454	4195454	8553170	4	17,205,166,200,	0,1918,10866,12478,
#Partially deleted in new
chr17	4216516	4263965	chr17:4216516-4263965	0	-	4216516	4216516	8553170	4	602,119,193,34,	0,19255,25739,47415,
#Partially deleted in new
chr17	4222090	4223828	chr17:4222090-4223828	7	+	4222090	4222090	16724991	1	1738,	0,
#Deleted in new
chr17	4267690	4268430	chr17:4267690-4268430	3	+	4267690	4267690	8553170	1	740,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	4269258	4366482	chr17:4269258-4366482	3	-	4282834	4366316	0	6	3258,124,179,98,103,212,	0,13539,19971,27458,37762,97012,
#Partially deleted in new
chr17	4271979	4366628	chr17:4271979-4366628	1	-	4282834	4296750	789624	7	537,124,179,98,103,115,358,	0,10818,17250,24737,35041,59794,94291,
#Partially deleted in new
chr17	4272235	4366625	chr17:4272235-4366625	0	-	4282920	4366316	789624	4	281,124,103,355,	0,10562,34785,94035,
#Partially deleted in new
chr17	4272296	4366628	chr17:4272296-4366628	0	-	4289404	4366316	789624	5	220,124,179,103,358,	0,10501,16933,34724,93974,
#Partially deleted in new
chr17	4282898	4331923	chr17:4282898-4331923	0	-	4282898	4296750	789624	5	23,179,98,103,150,	0,6331,13818,24122,48875,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	4296732	4345780	chr17:4296732-4345780	0	-	4296732	4296750	8553170	5	82,103,115,116,153,	0,10288,35041,38476,48895,
#Partially deleted in new
chr17	4301371	4302698	chr17:4301371-4302698	7	+	4301371	4301371	16724991	1	1327,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	4364163	4364453	chr17:4364163-4364453	3	-	4364163	4364163	8553170	1	290,	0,
#Partially deleted in new
chr17	4433687	4488208	chr17:4433687-4488208	3	+	4433967	4487894	789624	12	479,66,137,152,67,149,153,190,66,99,172,403,	0,5970,11344,12360,13208,14467,15547,19328,44884,52540,52724,54118,
#Partially deleted in new
chr17	4433956	4453205	chr17:4433956-4453205	0	+	4433956	4433956	8553170	6	210,66,152,67,149,190,	0,5701,12091,12939,14198,19059,
#Partially deleted in new
chr17	4433962	4488208	chr17:4433962-4488208	0	+	4433967	4448279	789624	11	204,66,152,67,149,153,190,66,99,172,403,	0,5695,12085,12933,14192,15272,19053,44609,52265,52449,53843,
#Partially deleted in new
chr17	4444975	4448205	chr17:4444975-4448205	0	+	4444975	4444975	8553170	4	193,152,67,51,	0,1072,1920,3179,
#Deleted in new
chr17	4446603	4448291	chr17:4446603-4448291	0	+	4446603	4446603	8553170	2	359,137,	0,1551,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	4481965	4486353	chr17:4481965-4486353	3	-	4481965	4481965	8553170	2	624,230,	0,4158,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	4482018	4483656	chr17:4482018-4483656	0	-	4482018	4482018	8553170	2	571,125,	0,1513,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	4482147	4483584	chr17:4482147-4483584	0	-	4482147	4482147	8553170	2	442,133,	0,1304,
#Partially deleted in new
chr17	4485016	4487862	chr17:4485016-4487862	0	+	4485016	4485016	8553170	4	203,99,172,57,	0,1211,1395,2789,
#Partially deleted in new
chr17	4497393	4499674	chr17:4497393-4499674	3	-	4497393	4497393	8553170	2	322,48,	0,2233,
#Partially deleted in new
chr17	4498837	4539035	chr17:4498837-4539035	3	+	4499047	4536942	789624	13	580,66,137,152,67,143,153,190,66,99,164,47,1583,	0,14409,26219,31794,32215,33704,34139,34405,34950,37238,37425,38062,38615,
#Deleted in new
chr17	4533031	4537798	chr17:4533031-4537798	0	+	4533031	4537798	789624	6	98,190,66,99,47,346,	0,211,756,3044,3868,4421,
#Deleted in new
chr17	4533242	4537699	chr17:4533242-4537699	0	+	4533242	4533242	8553170	5	190,66,351,47,247,	0,545,2833,3657,4210,
#Deleted in new
chr17	4533725	4537718	chr17:4533725-4537718	0	+	4533725	4533725	8553170	5	128,99,164,47,266,	0,2350,2537,3174,3727,
#Deleted in new
chr17	4533732	4538013	chr17:4533732-4538013	0	+	4533732	4533732	8553170	4	121,99,47,561,	0,2343,3167,3720,
#Deleted in new
chr17	4533747	4536730	chr17:4533747-4536730	0	+	4533747	4533747	8553170	2	106,655,	0,2328,
#Deleted in new
chr17	4534384	4536817	chr17:4534384-4536817	0	+	4534384	4534384	8553170	2	41,742,	0,1691,
#Deleted in new
chr17	4536761	4539035	chr17:4536761-4539035	0	+	4536761	4536761	8553170	2	185,1583,	0,691,
#Partially deleted in new
chr17	4538896	4555386	chr17:4538896-4555386	1	-	4538939	4555324	789624	27	79,529,137,102,108,69,126,253,158,171,150,87,152,97,100,168,126,111,296,118,168,176,108,75,84,96,260,	0,542,1451,2566,2887,3567,3719,4016,5592,5854,6129,6362,6713,6949,9061,9246,9627,10435,11161,12983,13228,13554,14913,15122,15298,15964,16230,
#Partially deleted in new
chr17	4538901	4555631	chr17:4538901-4555631	3	-	4539414	4555324	789624	26	1066,137,102,108,69,126,253,158,171,150,87,152,97,100,168,126,111,296,118,168,176,108,75,84,96,505,	0,1446,2561,2882,3562,3714,4011,5587,5849,6124,6357,6708,6944,9056,9241,9622,10430,11156,12978,13223,13549,14908,15117,15293,15959,16225,
#Deleted in new
chr17	4538901	4543299	chr17:4538901-4543299	0	-	4538901	4538901	8553170	7	1066,137,102,108,69,126,387,	0,1446,2561,2882,3562,3714,4011,
#Partially deleted in new
chr17	4538901	4554912	chr17:4538901-4554912	0	-	4538939	4554912	789624	26	74,529,137,102,108,69,126,253,158,171,150,87,152,97,100,168,126,111,296,118,168,176,108,75,84,52,	0,537,1446,2561,2882,3562,3714,4011,5587,5849,6124,6357,6708,6944,9056,9241,9622,10430,11156,12978,13223,13549,14908,15117,15293,15959,
#Deleted in new
chr17	4538905	4542423	chr17:4538905-4542423	0	-	4538905	4538905	8553170	4	1062,137,102,640,	0,1442,2557,2878,
#Partially deleted in new
chr17	4538943	4550061	chr17:4538943-4550061	0	-	4538943	4550061	789624	6	32,183,157,126,111,4,	0,495,9210,9580,10388,11114,
#Deleted in new
chr17	4539362	4544695	chr17:4539362-4544695	0	-	4539362	4539362	8553170	8	605,137,102,108,69,126,253,207,	0,985,2100,2421,3101,3253,3550,5126,
#Deleted in new
chr17	4539438	4541898	chr17:4539438-4541898	0	-	4539438	4539438	8553170	3	529,102,115,	0,2024,2345,
#Deleted in new
chr17	4539522	4545126	chr17:4539522-4545126	0	-	4539901	4545126	789624	3	445,48,95,	0,825,5509,
#Deleted in new
chr17	4540435	4542100	chr17:4540435-4542100	0	-	4540435	4540435	8553170	2	49,638,	0,1027,
#Deleted in new
chr17	4544901	4545932	chr17:4544901-4545932	0	-	4544901	4544901	8553170	4	20,320,152,87,	0,124,708,944,
#Partially deleted in new
chr17	4547684	4550177	chr17:4547684-4550177	0	-	4547684	4547684	8553170	5	373,168,126,111,120,	0,458,839,1647,2373,
#Partially deleted in new
chr17	4552182	4555358	chr17:4552182-4555358	0	-	4552182	4552182	8553170	6	110,176,284,84,96,232,	0,268,1627,2012,2678,2944,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	4556926	4560581	chr17:4556926-4560581	1	-	4558014	4560521	789624	3	2131,203,200,	0,2631,3455,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	4557311	4560818	chr17:4557311-4560818	3	-	4558014	4560521	789624	4	1746,96,203,437,	0,2031,2246,3070,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	4557424	4560576	chr17:4557424-4560576	1	-	4558014	4560521	789624	4	1633,114,203,195,	0,1918,2133,2957,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	4557819	4559935	chr17:4557819-4559935	1	-	4558014	4559052	789624	3	1238,114,378,	0,1523,1738,
#Deleted in new
chr17	4558366	4560564	chr17:4558366-4560564	0	-	4558366	4560521	789624	4	101,96,203,183,	0,976,1191,2015,
#Deleted in new
chr17	4559387	4560564	chr17:4559387-4560564	0	-	4559387	4559387	8553170	2	373,183,	0,994,
#Partially deleted in new
chr17	4565751	4571760	chr17:4565751-4571760	3	+	4565751	4565751	8553170	2	103,434,	0,5575,
#Partially deleted in new
chr17	4572205	4572515	chr17:4572205-4572515	7	+	4572205	4572205	16724991	1	310,	0,
#Partially deleted in new
chr17	4583998	4608319	chr17:4583998-4608319	3	+	4592393	4607487	789624	8	100,88,243,76,183,118,152,959,	0,8362,8930,9823,11146,12861,13173,23362,
#Partially deleted in new
chr17	4584538	4608314	chr17:4584538-4608314	1	+	4584605	4607487	789624	8	466,88,243,76,183,118,152,954,	0,7822,8390,9283,10606,12321,12633,22822,
#Partially deleted in new
chr17	4592354	4595260	chr17:4592354-4595260	0	+	4592393	4595260	789624	3	94,76,116,	0,1467,2790,
#Deleted in new
chr17	4595065	4596954	chr17:4595065-4596954	0	+	4595065	4595065	8553170	2	262,95,	0,1794,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	4610448	4617650	chr17:4610448-4617650	3	+	4610448	4610448	789624	2	385,888,	0,6314,
#Partially deleted in new
chr17	4619748	4619852	chr17:4619748-4619852	3	-	4619748	4619748	8553170	1	104,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	4630901	4642294	chr17:4630901-4642294	3	-	4631599	4641651	0	15	878,168,101,122,170,87,210,144,161,104,123,82,202,160,72,	0,987,1279,1959,2244,2512,4857,6213,7315,7679,7948,8149,8528,10615,11321,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	4630925	4641665	chr17:4630925-4641665	1	-	4631599	4641651	0	14	854,168,101,122,170,87,210,144,161,104,123,82,202,149,	0,963,1255,1935,2220,2488,4833,6189,7291,7655,7924,8125,8504,10591,
#Partially deleted in new
chr17	4631333	4641935	chr17:4631333-4641935	1	-	4631599	4641651	0	14	446,168,101,122,170,87,210,144,161,104,123,82,85,419,	0,555,847,1527,1812,2080,4425,5781,6883,7247,7516,7717,8096,10183,
#Partially deleted in new
chr17	4637169	4639164	chr17:4637169-4639164	0	-	4637169	4637169	8553170	4	89,161,123,114,	0,1047,1680,1881,
#Deleted in new
chr17	4638926	4639882	chr17:4638926-4639882	0	-	4638926	4638938	8553170	3	46,82,453,	0,124,503,
#Partially deleted in new
chr17	4638926	4641678	chr17:4638926-4641678	0	-	4638926	4638926	8553170	3	206,202,162,	0,503,2590,
#Partially deleted in new
chr17	4639437	4641875	chr17:4639437-4641875	0	-	4639437	4641651	789624	2	194,359,	0,2079,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr17	4669773	4704325	chr17:4669773-4704325	3	-	4671438	4704261	789624	17	1758,1455,207,56,160,148,117,89,88,127,151,60,72,150,106,65,463,	0,1917,3476,3845,4736,5035,5305,5500,6023,6262,6583,6979,12728,13029,21114,21604,34089,
#Partially deleted in new
chr17	4671384	4704337	chr17:4671384-4704337	1	-	4671438	4704261	789624	17	147,1455,207,56,160,148,117,89,88,127,151,60,72,150,106,65,475,	0,306,1865,2234,3125,3424,3694,3889,4412,4651,4972,5368,11117,11418,19503,19993,32478,
#Partially deleted in new
chr17	4671384	4704337	chr17:4671384-4704337	1	-	4671438	4682931	789624	19	147,192,1032,207,56,160,148,117,89,88,127,151,60,72,150,82,106,65,475,	0,306,729,1865,2234,3125,3424,3694,3889,4412,4651,4972,5368,11117,11418,11645,19503,19993,32478,
#Partially deleted in new
chr17	4671384	4704129	chr17:4671384-4704129	1	-	4671438	4704111	789624	17	147,1455,207,56,160,148,117,89,88,127,151,60,72,150,106,65,267,	0,306,1865,2234,3125,3424,3694,3889,4412,4651,4972,5368,11117,11418,19503,19993,32478,
#Partially deleted in new
chr17	4671387	4704111	chr17:4671387-4704111	0	-	4671387	4671387	8553170	16	144,1455,207,56,160,148,117,611,127,151,60,72,150,106,65,249,	0,303,1862,2231,3122,3421,3691,3886,4648,4969,5365,11114,11415,19500,19990,32475,
#Partially deleted in new
chr17	4671415	4704124	chr17:4671415-4704124	0	-	4683075	4704124	789624	19	116,192,1032,207,56,160,148,117,89,88,127,151,60,72,150,82,106,65,262,	0,275,698,1834,2203,3094,3393,3663,3858,4381,4620,4941,5337,11086,11387,11614,19472,19962,32447,
#Deleted in new
chr17	4672857	4673535	chr17:4672857-4673535	0	-	4672857	4672857	8553170	2	288,286,	0,392,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	4673829	4696786	chr17:4673829-4696786	0	+	4673829	4673829	8553170	2	44,163,	0,22794,
#Deleted in new
chr17	4674656	4675518	chr17:4674656-4675518	0	-	4674656	4674656	8553170	3	13,148,440,	0,152,422,
#Partially deleted in new
chr17	4675313	4704040	chr17:4675313-4704040	0	-	4675313	4704040	789624	10	49,88,127,7,60,72,150,106,65,178,	0,483,722,1187,1439,7188,7489,15574,16064,28549,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	4675378	4696831	chr17:4675378-4696831	3	+	4675378	4675378	8553170	3	81,95,208,	0,15695,21245,
#Deleted in new
chr17	4675678	4676244	chr17:4675678-4676244	0	-	4675678	4675678	8553170	2	206,209,	0,357,
#Partially deleted in new
chr17	4676469	4691825	chr17:4676469-4691825	0	-	4676469	4682931	789624	7	38,60,72,150,106,65,76,	0,283,6032,6333,14418,14908,15280,
#Partially deleted in new
chr17	4676785	4704106	chr17:4676785-4704106	0	-	4676785	4704106	789624	4	27,106,65,244,	0,14102,14592,27077,
#Partially deleted in new
chr17	4682724	4691214	chr17:4682724-4691214	0	-	4682724	4682724	8553170	2	228,327,	0,8163,
#Partially deleted in new
chr17	4683033	4704129	chr17:4683033-4704129	0	-	4683033	4683033	8553170	4	46,106,65,267,	0,7854,8344,20829,
#Partially deleted in new
chr17	4691001	4704129	chr17:4691001-4704129	0	-	4691001	4691001	8553170	2	441,267,	0,12861,
#Partially deleted in new
chr17	4704229	4705529	chr17:4704229-4705529	3	+	4704229	4704229	789624	2	141,331,	0,969,
#Deleted in new
chr17	4704815	4705217	chr17:4704815-4705217	7	-	4704815	4704815	16724991	1	402,	0,
#Partially deleted in new
chr17	4710488	4721471	chr17:4710488-4721471	3	+	4710721	4721039	789624	15	256,31,61,45,197,60,68,136,85,73,138,84,80,55,526,	0,4524,5484,5658,5923,6728,7196,7399,7772,8123,8794,9727,9904,10097,10457,
#Partially deleted in new
chr17	4710595	4719413	chr17:4710595-4719413	0	+	4710721	4717704	789624	8	149,31,61,60,68,136,73,131,	0,4417,5377,6621,7089,7292,8016,8687,
#Partially deleted in new
chr17	4710629	4721096	chr17:4710629-4721096	1	+	4717978	4721039	789624	14	115,61,45,197,60,68,136,85,73,138,84,80,55,151,	0,5343,5517,5782,6587,7055,7258,7631,7982,8653,9586,9763,9956,10316,
#Partially deleted in new
chr17	4710631	4716539	chr17:4710631-4716539	0	+	4710631	4710631	8553170	6	113,31,186,61,45,128,	0,4381,4519,5341,5515,5780,
#Partially deleted in new
chr17	4710631	4717941	chr17:4710631-4717941	0	+	4710631	4710631	8553170	6	113,61,197,60,68,54,	0,5341,5780,6585,7053,7256,
#Partially deleted in new
chr17	4710633	4721499	chr17:4710633-4721499	1	+	4710721	4721039	789624	14	111,31,61,197,60,68,136,85,73,138,84,80,91,554,	0,4379,5339,5778,6583,7051,7254,7627,7978,8649,9582,9759,9916,10312,
#Partially deleted in new
chr17	4710642	4721482	chr17:4710642-4721482	1	+	4717978	4721039	789624	13	102,45,197,60,68,136,85,73,138,84,80,55,537,	0,5504,5769,6574,7042,7245,7618,7969,8640,9573,9750,9943,10303,
#Partially deleted in new
chr17	4710654	4716473	chr17:4710654-4716473	0	+	4710654	4710654	8553170	4	90,31,61,327,	0,4358,5318,5492,
#Partially deleted in new
chr17	4710660	4717379	chr17:4710660-4717379	0	+	4710660	4710660	8553170	5	84,61,45,197,163,	0,5312,5486,5751,6556,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	4710681	4717062	chr17:4710681-4717062	0	+	4710681	4710681	8553170	5	63,31,61,45,651,	0,4331,5291,5465,5730,
#Partially deleted in new
chr17	4710690	4716515	chr17:4710690-4716515	0	+	4710721	4716006	789624	6	54,31,137,61,45,104,	0,4322,4509,5282,5456,5721,
#Partially deleted in new
chr17	4710690	4718370	chr17:4710690-4718370	0	+	4710690	4710690	8553170	4	54,60,68,483,	0,6526,6994,7197,
#Partially deleted in new
chr17	4710692	4721061	chr17:4710692-4721061	1	+	4710721	4721039	789624	14	52,31,61,197,60,68,136,85,73,138,84,80,55,116,	0,4320,5280,5719,6524,6992,7195,7568,7919,8590,9523,9700,9893,10253,
#Partially deleted in new
chr17	4710692	4721496	chr17:4710692-4721496	1	+	4710721	4721039	789624	15	52,31,61,45,260,60,68,136,85,73,138,84,80,55,551,	0,4320,5280,5454,5719,6524,6992,7195,7568,7919,8590,9523,9700,9893,10253,
#Partially deleted in new
chr17	4710696	4719418	chr17:4710696-4719418	0	+	4717978	4719418	789624	9	48,61,197,60,68,136,85,73,136,	0,5276,5715,6520,6988,7191,7564,7915,8586,
#Partially deleted in new
chr17	4710698	4721496	chr17:4710698-4721496	1	+	4710721	4720628	789624	15	46,31,61,45,197,60,68,136,85,73,7,84,80,55,551,	0,4314,5274,5448,5713,6518,6986,7189,7562,7913,8584,9517,9694,9887,10247,
#Partially deleted in new
chr17	4710723	4720407	chr17:4710723-4720407	0	+	4710723	4718614	789624	10	21,61,45,197,60,68,136,73,138,192,	0,5249,5423,5688,6493,6961,7164,7888,8559,9492,
#Deleted in new
chr17	4714550	4716002	chr17:4714550-4716002	0	+	4714550	4714550	8553170	2	493,30,	0,1422,
#Partially deleted in new
chr17	4715588	4721138	chr17:4715588-4721138	1	+	4717978	4721039	789624	13	445,45,197,60,68,136,85,73,138,84,80,55,193,	0,558,823,1628,2096,2299,2672,3023,3694,4627,4804,4997,5357,
#Deleted in new
chr17	4717435	4718149	chr17:4717435-4718149	0	+	4717435	4717435	8553170	2	317,262,	0,452,
#Partially deleted in new
chr17	4731427	4733312	chr17:4731427-4733312	1	+	4731489	4732980	789624	3	147,131,374,	0,348,1511,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	4731430	4732433	chr17:4731430-4732433	1	+	4731489	4731972	789624	2	144,658,	0,345,
#Partially deleted in new
chr17	4731433	4733610	chr17:4731433-4733610	3	+	4731489	4733187	789624	3	141,131,561,	0,342,1616,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	4733525	4739819	chr17:4733525-4739819	3	-	4734605	4739396	789624	6	954,70,417,83,139,559,	0,1057,1566,4882,5256,5735,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	4733574	4736380	chr17:4733574-4736380	0	-	4733574	4733574	8553170	4	905,70,417,92,	0,1008,1517,2714,
#Partially deleted in new
chr17	4734285	4739922	chr17:4734285-4739922	1	-	4734605	4739396	789624	5	367,417,83,139,662,	0,806,4122,4496,4975,
#Partially deleted in new
chr17	4734582	4738539	chr17:4734582-4738539	0	-	4734582	4734582	8553170	3	70,417,132,	0,509,3825,
#Partially deleted in new
chr17	4735366	4739145	chr17:4735366-4739145	0	-	4735366	4738837	789624	3	142,83,364,	0,3041,3415,
#Partially deleted in new
chr17	4740014	4746119	chr17:4740014-4746119	1	+	4740548	4745990	789624	14	36,622,235,156,161,153,81,117,89,99,154,83,161,301,	0,504,1567,1900,2316,3288,3752,3976,4175,4354,4610,4831,5200,5804,
#Partially deleted in new
chr17	4740023	4746115	chr17:4740023-4746115	1	+	4740548	4745990	789624	14	27,622,235,156,161,153,81,117,89,99,154,59,161,297,	0,495,1558,1891,2307,3279,3743,3967,4166,4345,4601,4846,5191,5795,
#Partially deleted in new
chr17	4740029	4744463	chr17:4740029-4744463	0	+	4740029	4740029	8553170	8	1111,235,156,161,153,341,89,95,	0,1552,1885,2301,3273,3737,4160,4339,
#Partially deleted in new
chr17	4740041	4746113	chr17:4740041-4746113	3	+	4740548	4745990	789624	13	9,622,235,156,161,153,81,89,99,154,59,161,295,	0,477,1540,1873,2289,3261,3725,4148,4327,4583,4828,5173,5777,
#Partially deleted in new
chr17	4740518	4746116	chr17:4740518-4746116	1	+	4740548	4745990	789624	13	622,235,156,161,153,81,117,89,99,154,83,161,298,	0,1063,1396,1812,2784,3248,3472,3671,3850,4106,4327,4696,5300,
#Deleted in new
chr17	4743746	4744846	chr17:4743746-4744846	0	+	4743746	4743746	8553170	4	101,117,89,478,	0,244,443,622,
#Partially deleted in new
chr17	4771883	4783213	chr17:4771883-4783213	0	+	4771883	4771883	8553170	4	216,81,535,100,	0,8905,10619,11230,
#Partially deleted in new
chr17	4771891	4783211	chr17:4771891-4783211	3	+	4771922	4783128	789624	5	208,81,137,184,98,	0,8897,10611,10962,11222,
#Deleted in new
chr17	4785284	4786432	chr17:4785284-4786432	3	-	4785361	4786352	789624	3	375,116,275,	0,652,873,
#Deleted in new
chr17	4785284	4786433	chr17:4785284-4786433	1	-	4785641	4786352	789624	2	375,276,	0,873,
#Deleted in new
chr17	4785284	4786398	chr17:4785284-4786398	1	-	4785641	4786352	789624	3	375,96,241,	0,672,873,
#Deleted in new
chr17	4785284	4786371	chr17:4785284-4786371	1	-	4785902	4786352	789624	3	375,152,214,	0,616,873,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	4787056	4789162	chr17:4787056-4789162	3	+	4787056	4787056	8553170	1	2106,	0,
#Deleted in new
chr17	4788958	4790390	chr17:4788958-4790390	3	+	4789011	4790296	789624	4	159,65,167,632,	0,267,552,800,
#Partially deleted in new
chr17	4796143	4798503	chr17:4796143-4798503	3	+	4796194	4798422	0	6	153,68,132,130,145,224,	0,584,1294,1538,1865,2136,
#Partially deleted in new
chr17	4796143	4798502	chr17:4796143-4798502	1	+	4796194	4798324	789624	6	153,68,132,130,145,243,	0,584,1294,1538,1865,2116,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	4796160	4797174	chr17:4796160-4797174	0	+	4796160	4796160	8553170	2	136,447,	0,567,
#Partially deleted in new
chr17	4796203	4798329	chr17:4796203-4798329	0	+	4796203	4797732	789624	6	93,68,132,95,145,50,	0,524,1234,1513,1805,2076,
#Deleted in new
chr17	4797683	4798475	chr17:4797683-4798475	0	+	4797683	4797683	8553170	2	470,196,	0,596,
#Partially deleted in new
chr17	4801158	4807013	chr17:4801158-4807013	0	-	4801158	4801158	8553170	2	297,265,	0,5590,
#Partially deleted in new
chr17	4801158	4802335	chr17:4801158-4802335	3	-	4801288	4802319	789624	2	297,89,	0,1088,
#Partially deleted in new
chr17	4807095	4823434	chr17:4807095-4823434	3	+	4807772	4822864	789624	25	130,110,131,143,106,66,59,93,153,150,84,79,111,171,127,119,114,105,89,114,50,135,154,115,795,	0,676,888,1178,2004,2202,2397,2595,2781,3706,7322,7537,8380,8668,9524,9841,10050,10906,11201,11398,11678,11988,12333,14697,15544,
#Partially deleted in new
chr17	4807168	4823428	chr17:4807168-4823428	1	+	4807772	4822864	789624	25	57,110,131,143,106,66,59,93,153,150,84,79,111,171,127,119,114,105,89,114,50,135,121,115,789,	0,603,815,1105,1931,2129,2324,2522,2708,3633,7249,7464,8307,8595,9451,9768,9977,10833,11128,11325,11605,11915,12260,14624,15471,
#Partially deleted in new
chr17	4807182	4818385	chr17:4807182-4818385	0	+	4807772	4808420	789624	18	43,110,131,178,106,66,59,93,153,150,84,79,111,171,127,119,114,384,	0,589,801,1091,1917,2115,2310,2508,2694,3619,7235,7450,8293,8581,9437,9754,9963,10819,
#Partially deleted in new
chr17	4807191	4809118	chr17:4807191-4809118	0	+	4807191	4807191	8553170	4	34,110,433,19,	0,580,792,1908,
#Partially deleted in new
chr17	4807561	4809325	chr17:4807561-4809325	0	+	4807772	4809325	789624	6	26,110,131,143,106,28,	0,210,422,712,1538,1736,
#Partially deleted in new
chr17	4810806	4815554	chr17:4810806-4815554	0	+	4810806	4814367	789624	4	145,135,79,79,	0,3560,3826,4669,
#Deleted in new
chr17	4814149	4815869	chr17:4814149-4815869	0	+	4814149	4814149	8553170	4	352,79,111,106,	0,483,1326,1614,
#Partially deleted in new
chr17	4815858	4816905	chr17:4815858-4816905	0	+	4815858	4815858	8553170	2	76,286,	0,761,
#Partially deleted in new
chr17	4815902	4817137	chr17:4815902-4817137	0	+	4815902	4815902	8553170	3	32,127,201,	0,717,1034,
#Deleted in new
chr17	4816707	4817375	chr17:4816707-4817375	0	+	4816707	4816707	8553170	2	348,230,	0,438,
#Partially deleted in new
chr17	4817145	4819515	chr17:4817145-4819515	0	+	4817145	4819515	789624	6	114,89,114,50,135,87,	0,1151,1348,1628,1938,2283,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	4817943	4819213	chr17:4817943-4819213	0	+	4817943	4817943	8553170	4	442,114,50,130,	0,550,830,1140,
#Deleted in new
chr17	4818197	4819465	chr17:4818197-4819465	0	+	4818197	4818197	8553170	4	410,50,135,37,	0,576,886,1231,
#Partially deleted in new
chr17	4818592	4823434	chr17:4818592-4823434	0	+	4818592	4823300	789624	7	15,50,135,154,115,81,176,	0,181,491,836,3200,4047,4666,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	4821639	4822795	chr17:4821639-4822795	0	+	4821639	4821639	8553170	2	268,156,	0,1000,
#Partially deleted in new
chr17	4833387	4898053	chr17:4833387-4898053	3	+	4833583	4897287	789624	32	253,66,57,126,111,91,131,55,79,176,70,211,117,219,174,261,86,111,113,89,164,106,138,109,168,144,135,101,150,160,140,850,	0,44929,47596,47744,50975,51524,52095,52523,52732,53063,53722,54192,56259,57129,57563,58068,58761,59014,59268,59591,60046,60600,60786,61137,61687,61962,62310,62615,62805,63041,63286,63816,
#Partially deleted in new
chr17	4833398	4897805	chr17:4833398-4897805	0	+	4833398	4833398	8553170	31	242,66,57,126,111,91,131,55,79,167,70,211,1089,174,201,86,113,89,24,164,106,138,109,168,144,135,101,150,160,140,602,	0,44918,47585,47733,50964,51513,52084,52512,52721,53052,53711,54181,56248,57552,58117,58750,59257,59580,59887,60035,60589,60775,61126,61676,61951,62299,62604,62794,63030,63275,63805,
#Partially deleted in new
chr17	4833399	4898054	chr17:4833399-4898054	1	+	4833583	4897287	789624	32	241,66,57,126,111,91,131,55,79,176,70,211,117,219,174,261,86,113,89,24,164,106,138,109,168,144,135,101,150,160,140,851,	0,44917,47584,47732,50963,51512,52083,52511,52720,53051,53710,54180,56247,57117,57551,58056,58749,59256,59579,59886,60034,60588,60774,61125,61675,61950,62298,62603,62793,63029,63274,63804,
#Partially deleted in new
chr17	4833412	4898053	chr17:4833412-4898053	0	+	4833583	4881171	789624	32	228,116,66,57,126,111,91,131,55,79,176,70,211,117,219,174,261,86,113,89,164,106,138,109,168,144,135,101,150,160,140,850,	0,25800,44904,47571,47719,50950,51499,52070,52498,52707,53038,53697,54167,56234,57104,57538,58043,58736,59243,59566,60021,60575,60761,61112,61662,61937,62285,62590,62780,63016,63261,63791,
#Partially deleted in new
chr17	4833583	4897287	chr17:4833583-4897287	1	+	4833583	4897287	789624	32	57,66,57,126,111,91,131,55,79,176,70,211,117,219,174,201,86,111,113,89,164,106,138,109,168,144,135,101,150,160,140,84,	0,44733,47400,47548,50779,51328,51899,52327,52536,52867,53526,53996,56063,56933,57367,57932,58565,58818,59072,59395,59850,60404,60590,60941,61491,61766,62114,62419,62609,62845,63090,63620,
#Partially deleted in new
chr17	4833620	4885965	chr17:4833620-4885965	0	+	4833620	4881131	789624	8	20,66,57,144,111,91,131,55,	0,44696,47363,47493,50742,51291,51862,52290,
#Partially deleted in new
chr17	4856756	4857374	chr17:4856756-4857374	7	-	4856756	4856756	16724991	1	618,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	4882974	4883316	chr17:4882974-4883316	3	+	4882974	4882974	8553170	1	342,	0,
#Partially deleted in new
chr17	4884468	4898061	chr17:4884468-4898061	0	+	4884468	4890431	789624	28	5,91,131,55,79,176,70,211,117,514,174,261,86,113,89,24,164,106,138,109,168,144,135,101,150,160,140,858,	0,443,1014,1442,1651,1982,2641,3111,5178,5753,6482,6987,7680,8187,8510,8817,8965,9519,9705,10056,10606,10881,11229,11534,11724,11960,12205,12735,
#Deleted in new
chr17	4892470	4893650	chr17:4892470-4893650	0	+	4892470	4892470	8553170	3	42,113,672,	0,185,508,
#Deleted in new
chr17	4893195	4893871	chr17:4893195-4893871	0	+	4893195	4893195	8553170	2	114,438,	0,238,
#Deleted in new
chr17	4893577	4894216	chr17:4893577-4894216	0	+	4893577	4893577	8553170	2	516,43,	0,596,
#Deleted in new
chr17	4894543	4898060	chr17:4894543-4898060	0	+	4894543	4894543	8553170	5	699,754,150,160,1387,	0,806,1649,1885,2130,
#Deleted in new
chr17	4894857	4895789	chr17:4894857-4895789	0	+	4894857	4894857	8553170	3	385,144,92,	0,492,840,
#Deleted in new
chr17	4896204	4897145	chr17:4896204-4897145	0	+	4896204	4896861	789624	3	138,160,472,	0,224,469,
#Deleted in new
chr17	4897773	4903074	chr17:4897773-4903074	1	-	4898735	4903063	0	12	1118,107,187,115,115,201,101,156,110,45,143,57,	0,1227,1424,1694,3019,3216,3751,4158,4443,4676,4847,5244,
#Deleted in new
chr17	4897773	4903091	chr17:4897773-4903091	3	-	4898735	4903063	8553170	12	1118,107,187,115,115,201,101,156,110,45,143,74,	0,1227,1424,1694,3019,3216,3751,4158,4443,4676,4847,5244,
#Deleted in new
chr17	4898056	4901811	chr17:4898056-4901811	0	-	4898056	4898056	8553170	7	835,107,187,115,115,201,287,	0,944,1141,1411,2736,2933,3468,
#Partially deleted in new
chr17	4898084	4934438	chr17:4898084-4934438	1	-	4898853	4899566	8553170	11	1023,187,115,115,201,101,156,110,45,143,97,	0,1113,1383,2708,2905,3440,3847,4132,4365,4536,36257,
#Deleted in new
chr17	4899417	4900799	chr17:4899417-4900799	1	+	4899762	4900166	789624	2	411,864,	0,518,
#Deleted in new
chr17	4899535	4902932	chr17:4899535-4902932	3	+	4899762	4900533	789624	3	293,210,2696,	0,400,701,
#Deleted in new
chr17	4901008	4902630	chr17:4901008-4902630	0	-	4901008	4901008	8553170	6	182,101,109,110,45,10,	0,516,970,1208,1441,1612,
#Deleted in new
chr17	4932296	4935030	chr17:4932296-4935030	3	+	4932604	4934563	0	2	69,2432,	0,302,
#Deleted in new
chr17	4932329	4934979	chr17:4932329-4934979	1	+	4932604	4934563	789624	3	36,1278,1025,	0,269,1625,
#Deleted in new
chr17	4937129	4940251	chr17:4937129-4940251	3	-	4937740	4939910	789624	8	767,52,100,91,91,207,153,436,	0,893,1024,1209,1382,1639,1930,2686,
#Deleted in new
chr17	4937316	4940030	chr17:4937316-4940030	0	-	4937316	4937316	8553170	6	580,52,100,91,91,1262,	0,706,837,1022,1195,1452,
#Deleted in new
chr17	4937723	4940053	chr17:4937723-4940053	1	-	4937740	4939910	789624	7	173,52,100,91,91,207,238,	0,299,430,615,788,1045,2092,
#Deleted in new
chr17	4937762	4939913	chr17:4937762-4939913	0	-	4937762	4939910	789624	8	134,52,100,91,91,207,153,65,	0,260,391,576,749,1006,1297,2086,
#Deleted in new
chr17	4938153	4938557	chr17:4938153-4938557	0	-	4938153	4938153	8553170	2	276,46,	0,358,
#Partially deleted in new
chr17	4940007	4945191	chr17:4940007-4945191	3	+	4940909	4945016	789624	11	223,240,121,81,126,88,91,106,94,81,477,	0,479,865,1069,2333,2569,2843,3171,3418,4550,4707,
#Deleted in new
chr17	4940045	4940836	chr17:4940045-4940836	0	+	4940045	4940045	8553170	2	185,350,	0,441,
#Partially deleted in new
chr17	4940082	4942652	chr17:4940082-4942652	0	+	4940909	4942652	789624	5	148,121,81,126,76,	0,790,994,2258,2494,
#Partially deleted in new
chr17	4940099	4942466	chr17:4940099-4942466	0	+	4940909	4942466	789624	4	261,121,81,126,	0,773,977,2241,
#Partially deleted in new
chr17	4940119	4945170	chr17:4940119-4945170	1	+	4940909	4945016	789624	11	111,156,121,81,126,88,91,106,94,81,456,	0,367,753,957,2221,2457,2731,3059,3306,4438,4595,
#Partially deleted in new
chr17	4940127	4945222	chr17:4940127-4945222	1	+	4940909	4945016	789624	10	233,507,81,126,88,91,106,94,81,508,	0,359,949,2213,2449,2723,3051,3298,4430,4587,
#Partially deleted in new
chr17	4940298	4942605	chr17:4940298-4942605	0	+	4941097	4942605	789624	4	62,81,126,29,	0,778,2042,2278,
#Partially deleted in new
chr17	4940380	4945191	chr17:4940380-4945191	1	+	4940909	4945016	789624	9	613,81,126,88,91,106,94,81,477,	0,696,1960,2196,2470,2798,3045,4177,4334,
#Partially deleted in new
chr17	4940486	4945172	chr17:4940486-4945172	1	+	4941097	4945016	789624	10	240,71,81,126,88,91,106,94,81,458,	0,436,590,1854,2090,2364,2692,2939,4071,4228,
#Partially deleted in new
chr17	4940657	4944601	chr17:4940657-4944601	0	+	4940657	4940657	8553170	6	336,81,126,88,91,44,	0,419,1683,1919,2193,3900,
#Partially deleted in new
chr17	4940658	4944851	chr17:4940658-4944851	0	+	4940909	4944570	789624	6	335,126,88,91,81,137,	0,1682,1918,2192,3899,4056,
#Partially deleted in new
chr17	4940975	4943038	chr17:4940975-4943038	0	+	4940975	4940975	8553170	5	18,81,126,88,188,	0,101,1365,1601,1875,
#Partially deleted in new
chr17	4942618	4945209	chr17:4942618-4945209	0	+	4942618	4944847	789624	5	46,91,106,94,652,	0,232,560,807,1939,
#Partially deleted in new
chr17	4942850	4945222	chr17:4942850-4945222	0	+	4942850	4944847	789624	2	91,508,	0,1864,
#Partially deleted in new
chr17	4943067	4944800	chr17:4943067-4944800	0	+	4943067	4943067	8553170	3	452,81,86,	0,1490,1647,
#Deleted in new
chr17	4944379	4944895	chr17:4944379-4944895	0	+	4944379	4944379	8553170	2	259,181,	0,335,
#Deleted in new
chr17	4945651	4949014	chr17:4945651-4949014	3	-	4945899	4948394	0	3	346,193,752,	0,976,2611,
#Deleted in new
chr17	4945666	4947469	chr17:4945666-4947469	1	-	4945899	4946844	789624	2	331,842,	0,961,
#Deleted in new
chr17	4946692	4949061	chr17:4946692-4949061	0	-	4946692	4949019	789624	3	128,293,118,	0,1570,2251,
#Deleted in new
chr17	4948091	4951914	chr17:4948091-4951914	0	+	4951829	4951914	789624	2	256,87,	0,3736,
#Partially deleted in new
chr17	4948251	4955220	chr17:4948251-4955220	0	+	4951829	4955220	789624	7	122,87,96,59,70,134,146,	0,3576,4543,4799,5020,5460,6823,
#Partially deleted in new
chr17	4949176	4953845	chr17:4949176-4953845	0	+	4951829	4953845	789624	6	117,87,96,59,70,134,	0,2651,3618,3874,4095,4535,
#Partially deleted in new
chr17	4950189	4955268	chr17:4950189-4955268	0	+	4951829	4955268	789624	7	441,87,96,59,70,134,194,	0,1638,2605,2861,3082,3522,4885,
#Partially deleted in new
chr17	4951079	4953845	chr17:4951079-4953845	0	+	4951829	4953845	789624	6	103,194,96,59,70,134,	0,641,1715,1971,2192,2632,
#Partially deleted in new
chr17	4951088	4955588	chr17:4951088-4955588	0	+	4951829	4955588	789624	8	94,87,96,59,70,134,223,182,	0,739,1706,1962,2183,2623,3986,4318,
#Partially deleted in new
chr17	4951094	4957131	chr17:4951094-4957131	3	+	4951829	4957047	0	12	130,87,96,59,70,134,223,198,202,109,59,154,	0,733,1700,1956,2177,2617,3980,4312,4847,5478,5736,5883,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	4951118	4952347	chr17:4951118-4952347	0	+	4951118	4951118	8553170	2	64,520,	0,709,
#Partially deleted in new
chr17	4951118	4957127	chr17:4951118-4957127	1	+	4951829	4957047	0	10	64,87,96,134,223,198,202,109,59,150,	0,709,1676,2593,3956,4288,4823,5454,5712,5859,
#Partially deleted in new
chr17	4951118	4954225	chr17:4951118-4954225	0	+	4951118	4951118	8553170	6	64,87,96,59,70,514,	0,709,1676,1932,2153,2593,
#Partially deleted in new
chr17	4951118	4955862	chr17:4951118-4955862	0	+	4951829	4952116	789624	9	64,87,123,96,59,70,134,223,456,	0,709,906,1676,1932,2153,2593,3956,4288,
#Partially deleted in new
chr17	4951118	4955093	chr17:4951118-4955093	0	+	4951829	4955093	789624	7	96,87,96,59,70,134,19,	0,709,1676,1932,2153,2593,3956,
#Partially deleted in new
chr17	4951118	4953202	chr17:4951118-4953202	0	+	4951118	4951118	8553170	3	64,87,408,	0,709,1676,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	4951140	4952266	chr17:4951140-4952266	0	+	4951140	4951140	8553170	2	84,439,	0,687,
#Partially deleted in new
chr17	4951757	4957118	chr17:4951757-4957118	1	+	4951829	4957047	0	11	157,96,59,70,134,223,198,202,109,59,141,	0,1037,1293,1514,1954,3317,3649,4184,4815,5073,5220,
#Deleted in new
chr17	4955799	4957127	chr17:4955799-4957127	0	+	4955799	4955799	8553170	4	344,109,59,150,	0,773,1031,1178,
#Deleted in new
chr17	4956166	4957129	chr17:4956166-4957129	0	+	4956166	4956166	8553170	3	515,59,152,	0,664,811,
#Partially deleted in new
chr17	4959225	4967790	chr17:4959225-4967790	1	-	4959715	4967771	789624	6	691,90,85,89,68,71,	0,796,1008,1233,1560,8494,
#Partially deleted in new
chr17	4959227	4967872	chr17:4959227-4967872	3	-	4959533	4967804	0	7	416,157,90,85,89,68,153,	0,532,794,1006,1231,1558,8492,
#Partially deleted in new
chr17	4959255	4967191	chr17:4959255-4967191	1	-	4959533	4960547	789624	7	388,157,90,85,89,68,791,	0,504,766,978,1203,1530,7145,
#Partially deleted in new
chr17	4959502	4967789	chr17:4959502-4967789	0	-	4960135	4967771	789624	6	141,157,169,89,68,70,	0,257,519,956,1283,8217,
#Deleted in new
chr17	4959983	4960621	chr17:4959983-4960621	0	-	4959983	4959983	8553170	2	335,163,	0,475,
#Partially deleted in new
chr17	4960186	4967785	chr17:4960186-4967785	0	-	4960186	4960186	8553170	3	361,68,66,	0,599,7533,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	4965829	4967808	chr17:4965829-4967808	0	-	4965829	4965829	8553170	2	490,89,	0,1890,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	4966237	4966749	chr17:4966237-4966749	0	-	4966237	4966237	8553170	2	82,349,	0,163,
#Partially deleted in new
chr17	4967991	4986234	chr17:4967991-4986234	0	-	4981823	4986222	789624	21	828,75,188,72,184,197,305,223,79,185,116,135,127,938,135,154,139,136,68,104,43,	0,915,1158,1638,1910,2348,4240,4777,5183,5593,6393,9066,10512,11692,13233,13686,14097,14765,14984,17888,18200,
#Deleted in new
chr17	4967994	4968822	chr17:4967994-4968822	3	+	4967994	4967994	8553170	2	172,302,	0,526,
#Partially deleted in new
chr17	4967996	4987370	chr17:4967996-4987370	1	-	4968755	4986958	789624	22	823,75,188,21,72,184,197,305,223,79,185,116,135,127,938,135,154,136,68,104,95,417,	0,910,1153,1503,1633,1905,2343,4235,4772,5178,5588,6388,9061,10507,11687,13228,13681,14760,14979,17883,18195,18957,
#Partially deleted in new
chr17	4967996	4987650	chr17:4967996-4987650	1	-	4968755	4987629	789624	21	823,75,188,72,184,197,305,223,79,185,116,135,127,938,135,154,72,136,68,104,58,	0,910,1153,1633,1905,2343,4235,4772,5178,5588,6388,9061,10507,11687,13228,13681,14092,14760,14979,17883,19596,
#Partially deleted in new
chr17	4967996	4987112	chr17:4967996-4987112	1	-	4968705	4986958	789624	23	823,73,188,21,72,184,197,305,223,79,185,116,135,127,938,135,154,72,136,68,104,95,159,	0,910,1153,1503,1633,1905,2343,4235,4772,5178,5588,6388,9061,10507,11687,13228,13681,14092,14760,14979,17883,18195,18957,
#Partially deleted in new
chr17	4967996	4987641	chr17:4967996-4987641	1	-	4968755	4986222	789624	23	823,75,188,21,72,184,197,305,223,79,185,116,135,127,938,135,154,87,136,68,104,95,49,	0,910,1153,1503,1633,1905,2343,4235,4772,5178,5588,6388,9061,10507,11687,13228,13681,14092,14760,14979,17883,18195,19596,
#Partially deleted in new
chr17	4967997	4987652	chr17:4967997-4987652	3	-	4968755	4986222	789624	23	822,75,188,21,72,184,197,305,223,79,185,116,135,127,938,135,154,72,136,68,104,95,60,	0,909,1152,1502,1632,1904,2342,4234,4771,5177,5587,6387,9060,10506,11686,13227,13680,14091,14759,14978,17882,18194,19595,
#Deleted in new
chr17	4968138	4969081	chr17:4968138-4969081	0	-	4968138	4968138	8553170	2	681,175,	0,768,
#Deleted in new
chr17	4968396	4969415	chr17:4968396-4969415	0	-	4968396	4968396	8553170	3	423,75,266,	0,510,753,
#Partially deleted in new
chr17	4969427	4972793	chr17:4969427-4972793	0	-	4969427	4969427	8553170	5	274,184,197,305,25,	0,474,912,2804,3341,
#Deleted in new
chr17	4969701	4969771	chr17:4969701-4969771	3	-	4969701	4969701	5263520	1	70,	0,
#Deleted in new
chr17	4970085	4970150	chr17:4970085-4970150	3	-	4970085	4970085	5263520	1	65,	0,
#Deleted in new
chr17	4972850	4974681	chr17:4972850-4974681	3	+	4972850	4972850	8553170	2	117,322,	0,1509,
#Partially deleted in new
chr17	4972950	4978569	chr17:4972950-4978569	0	-	4972950	4972950	8553170	5	41,79,116,135,66,	0,224,1434,4107,5553,
#Partially deleted in new
chr17	4974047	4977200	chr17:4974047-4977200	0	-	4974047	4974047	8553170	2	453,143,	0,3010,
#Partially deleted in new
chr17	4980435	4987632	chr17:4980435-4987632	0	-	4981823	4987629	789624	8	186,135,154,139,136,68,104,40,	0,789,1242,1653,2321,2540,5444,7157,
#Partially deleted in new
chr17	4980617	4986213	chr17:4980617-4986213	0	-	4980617	4986213	789624	7	4,135,65,136,68,104,22,	0,607,1060,2139,2358,5262,5574,
#Deleted in new
chr17	4982801	4983236	chr17:4982801-4983236	0	-	4982801	4982801	8553170	2	91,261,	0,174,
#Deleted in new
chr17	4986465	4987324	chr17:4986465-4987324	3	+	4986465	4986465	8553170	2	29,513,	0,346,
#Deleted in new
chr17	4987705	4988446	chr17:4987705-4988446	3	+	4987705	4987705	8553170	2	520,31,	0,710,
#Partially deleted in new
chr17	4988129	4997610	chr17:4988129-4997610	1	-	4988404	4994437	789624	8	425,166,152,40,114,82,289,115,	0,649,1298,1760,2022,6264,8711,9366,
#Partially deleted in new
chr17	4988129	4997610	chr17:4988129-4997610	3	-	4988404	4994437	789624	8	425,166,152,40,114,82,127,115,	0,649,1298,1760,2022,6264,8873,9366,
#Partially deleted in new
chr17	4988211	4997033	chr17:4988211-4997033	1	-	4988404	4994437	789624	7	343,166,197,40,114,82,31,	0,567,1216,1678,1940,6182,8791,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr17	4997947	5028401	chr17:4997947-5028401	3	+	5000246	5024151	0	23	209,121,133,77,180,66,179,112,78,66,76,79,146,170,80,76,80,95,84,187,73,618,4934,	0,1902,2272,2824,3274,4111,4516,4783,5664,5903,6050,6619,6907,8967,9315,9519,15705,16795,22048,22544,22858,24144,25520,
#Deleted in new
chr17	4997953	5002109	chr17:4997953-5002109	0	+	5000246	5002109	789624	7	203,34,121,133,77,180,51,	0,1059,1896,2266,2818,3268,4105,
#Partially deleted in new
chr17	5007464	5012074	chr17:5007464-5012074	0	+	5007464	5007464	8553170	2	78,512,	0,4098,
#Partially deleted in new
chr17	5014193	5022265	chr17:5014193-5022265	0	+	5014193	5014193	8553170	6	113,95,84,187,73,174,	0,549,5802,6298,6612,7898,
#Deleted in new
chr17	5019213	5020093	chr17:5019213-5020093	3	-	5019213	5019213	789624	2	438,145,	0,735,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	5032599	5052009	chr17:5032599-5052009	1	-	5033126	5034606	789624	4	570,880,237,1305,	0,879,1877,18105,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	5032601	5035426	chr17:5032601-5035426	1	-	5032956	5034606	789624	5	568,124,880,237,566,	0,659,877,1875,2259,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	5032602	5035424	chr17:5032602-5035424	0	-	5032602	5032602	8553170	4	567,124,1235,564,	0,658,876,2258,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	5032604	5035432	chr17:5032604-5035432	3	-	5032956	5034606	789624	5	565,124,880,271,572,	0,656,874,1872,2256,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	5032715	5035422	chr17:5032715-5035422	0	-	5032715	5032715	8553170	4	454,1098,271,562,	0,545,1761,2145,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	5060355	5062123	chr17:5060355-5062123	7	+	5060355	5060355	16724991	4	52,58,137,169,	0,429,771,1599,
#Partially deleted in new
chr17	5075677	5078113	chr17:5075677-5078113	3	-	5075677	5075677	8553170	2	263,227,	0,2209,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	5078247	5096374	chr17:5078247-5096374	3	+	5091504	5093013	789624	2	328,4878,	0,13249,
#Partially deleted in new
chr17	5105540	5111841	chr17:5105540-5111841	1	-	5105823	5111822	789624	4	966,127,475,42,	0,3385,3853,6259,
#Partially deleted in new
chr17	5105634	5123102	chr17:5105634-5123102	3	-	5105823	5111822	789624	5	899,127,475,552,126,	0,3291,3759,6165,17342,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	5105734	5112064	chr17:5105734-5112064	0	-	5105734	5105734	8553170	3	799,843,265,	0,3191,6065,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	5106231	5109325	chr17:5106231-5109325	0	-	5106231	5106231	8553170	3	302,22,400,	0,2554,2694,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	5111467	5114379	chr17:5111467-5114379	3	+	5111467	5111467	8553170	3	173,67,222,	0,1918,2690,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	5111931	5114377	chr17:5111931-5114377	1	+	5111931	5111931	789624	3	187,67,220,	0,1454,2226,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	5113358	5115004	chr17:5113358-5115004	0	+	5113358	5113358	8553170	1	1646,	0,
#Deleted in new
chr17	5113772	5114376	chr17:5113772-5114376	1	+	5113772	5113772	8553170	2	207,219,	0,385,
#Boundary problem: need 38, got 0, diff 38, mapped 0.0
chr17	5116437	5174991	chr17:5116437-5174991	3	+	5130367	5172978	789624	38	303,91,162,376,707,118,136,182,154,73,83,40,81,108,110,49,121,95,66,100,153,420,75,139,106,174,175,152,112,212,185,87,121,192,289,437,93,2187,	0,1762,4189,4937,8128,9383,11066,12514,13498,13929,14164,15958,16472,17005,17449,18796,19370,20202,20683,21213,21683,22817,24987,25565,25959,28252,28967,29585,30645,32118,38984,45090,46446,51494,52329,54041,55149,56367,
#Deleted in new
chr17	5126739	5127010	chr17:5126739-5127010	7	-	5126739	5126739	16724991	1	271,	0,
#Partially deleted in new
chr17	5128391	5175034	chr17:5128391-5175034	1	+	5130367	5172978	789624	30	1698,73,83,40,81,108,110,49,121,95,66,100,153,420,75,139,106,174,175,152,112,212,185,87,121,192,289,437,93,2230,	0,1975,2210,4004,4518,5051,5495,6842,7416,8248,8729,9259,9729,10863,13033,13611,14005,16298,17013,17631,18691,20164,27030,33136,34492,39540,40375,42087,43195,44413,
#Partially deleted in new
chr17	5128391	5175032	chr17:5128391-5175032	0	+	5130367	5148597	789624	29	1698,73,83,40,81,108,110,49,121,95,66,100,153,420,75,139,106,174,175,152,212,185,87,121,192,289,437,93,2228,	0,1975,2210,4004,4518,5051,5495,6842,7416,8248,8729,9259,9729,10863,13033,13611,14005,16298,17013,17631,20164,27030,33136,34492,39540,40375,42087,43195,44413,
#Partially deleted in new
chr17	5128391	5175032	chr17:5128391-5175032	0	+	5130367	5139023	789624	31	1698,73,83,40,81,108,110,49,121,95,66,100,153,211,420,75,139,106,174,175,152,112,212,185,87,121,192,289,437,93,2228,	0,1975,2210,4004,4518,5051,5495,6842,7416,8248,8729,9259,9729,10579,10863,13033,13611,14005,16298,17013,17631,18691,20164,27030,33136,34492,39540,40375,42087,43195,44413,
#Deleted in new
chr17	5128765	5133550	chr17:5128765-5133550	0	+	5128765	5128765	8553170	4	157,223,81,108,	0,3447,4144,4677,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	5128814	5135003	chr17:5128814-5135003	0	+	5128814	5128814	8553170	8	108,154,73,83,223,81,108,1117,	0,1121,1552,1787,3398,4095,4628,5072,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	5179535	5184397	chr17:5179535-5184397	1	-	5181832	5184256	789624	1	4862,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	5180077	5191883	chr17:5180077-5191883	3	-	5181832	5184256	789624	2	4199,136,	0,11670,
#Partially deleted in new
chr17	5183950	5191862	chr17:5183950-5191862	0	-	5183950	5184256	789624	2	326,431,	0,7481,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	5192083	5223643	chr17:5192083-5223643	0	+	5192083	5192083	8553170	3	80,147,327,	0,23063,31233,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	5192089	5235637	chr17:5192089-5235637	0	+	5192089	5192089	8553170	8	74,146,160,147,168,119,353,524,	0,17660,21960,23057,31227,41734,42369,43024,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	5192103	5235643	chr17:5192103-5235643	3	+	5192103	5192103	789624	8	60,146,160,147,168,119,219,696,	0,17646,21946,23043,31213,41720,42489,42844,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	5208960	5234860	chr17:5208960-5234860	3	-	5210800	5234755	789624	5	1995,74,64,124,126,	0,5964,12326,14372,25774,
#Partially deleted in new
chr17	5210149	5234860	chr17:5210149-5234860	1	-	5210800	5234755	789624	5	806,74,64,103,126,	0,4775,11137,13204,24585,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	5213011	5234823	chr17:5213011-5234823	1	-	5214726	5234755	789624	5	1825,74,64,103,89,	0,1913,8275,10342,21723,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	5240507	5241543	chr17:5240507-5241543	3	-	5240507	5240507	8553170	3	79,81,338,	0,452,698,
#Partially deleted in new
chr17	5282264	5308802	chr17:5282264-5308802	0	+	5282486	5308802	789624	3	256,186,109,	0,1619,26429,
#Partially deleted in new
chr17	5282299	5385812	chr17:5282299-5385812	3	+	5282486	5383223	0	18	221,129,204,161,120,136,179,132,468,105,117,99,141,190,56,99,117,2691,	0,26394,49649,52884,55719,64490,68151,72059,78908,80612,82822,86070,91014,94816,95877,98064,99089,100822,
#Partially deleted in new
chr17	5282321	5378693	chr17:5282321-5378693	0	+	5282321	5282321	8553170	14	199,204,161,120,136,179,132,468,105,117,99,141,190,517,	0,49627,52862,55697,64468,68129,72037,78886,80590,82800,86048,90992,94794,95855,
#Partially deleted in new
chr17	5282486	5383223	chr17:5282486-5383223	1	+	5282486	5383223	0	17	34,129,204,161,120,136,179,132,468,105,117,99,141,190,56,117,102,	0,26207,49462,52697,55532,64303,67964,71872,78721,80425,82635,85883,90827,94629,95690,98902,100635,
#Partially deleted in new
chr17	5332054	5336689	chr17:5332054-5336689	0	+	5332054	5336532	789624	3	98,161,202,	0,3129,4433,
#Partially deleted in new
chr17	5354400	5361629	chr17:5354400-5361629	0	+	5354400	5361629	789624	3	90,66,422,	0,2107,6807,
#Partially deleted in new
chr17	5360962	5386208	chr17:5360962-5386208	0	-	5360962	5360962	8553170	2	1124,71,	0,25175,
#Partially deleted in new
chr17	5361813	5388850	chr17:5361813-5388850	0	-	5387059	5388850	789624	7	273,119,86,81,66,126,49,	0,24894,25170,25572,25791,25965,26988,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	5364314	5371626	chr17:5364314-5371626	3	-	5364314	5364314	8553170	2	131,381,	0,6931,
#Partially deleted in new
chr17	5377210	5381721	chr17:5377210-5381721	0	+	5377210	5381598	789624	4	95,56,99,333,	0,966,3153,4178,
#Partially deleted in new
chr17	5386025	5420160	chr17:5386025-5420160	3	-	5386205	5419650	789624	17	244,119,127,81,66,126,159,102,91,99,148,187,177,87,126,170,807,	0,682,958,1360,1579,1753,2776,5535,8865,13526,18073,19031,22707,24677,27983,30487,33328,
#Partially deleted in new
chr17	5386101	5419466	chr17:5386101-5419466	0	-	5386205	5419466	789624	17	168,119,127,81,66,174,159,102,91,99,148,187,177,87,126,170,113,	0,606,882,1284,1503,1677,2700,5459,8789,13450,17997,18955,22631,24601,27907,30411,33252,
#Deleted in new
chr17	5386103	5387132	chr17:5386103-5387132	0	-	5386103	5386103	8553170	3	166,119,149,	0,604,880,
#Deleted in new
chr17	5386686	5387912	chr17:5386686-5387912	0	-	5386686	5386686	8553170	5	140,127,81,66,134,	0,297,699,918,1092,
#Partially deleted in new
chr17	5387083	5394979	chr17:5387083-5394979	0	-	5387083	5387083	8553170	6	27,285,126,159,102,89,	0,302,695,1718,4477,7807,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	5387543	5388250	chr17:5387543-5388250	0	-	5387543	5387543	8553170	2	127,472,	0,235,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	5388375	5419662	chr17:5388375-5419662	0	-	5388375	5388375	8553170	11	585,102,91,99,148,187,177,87,126,170,309,	0,3185,6515,11176,15723,16681,20357,22327,25633,28137,30978,
#Partially deleted in new
chr17	5391474	5399633	chr17:5391474-5399633	0	-	5391474	5391474	8553170	3	188,91,82,	0,3416,8077,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	5408736	5418229	chr17:5408736-5418229	0	-	5408736	5416586	789624	5	173,87,126,170,215,	0,1966,5272,7776,9278,
#Partially deleted in new
chr17	5419640	5432876	chr17:5419640-5432876	1	+	5420210	5432571	789624	6	651,171,61,112,64,335,	0,1655,3128,6330,6595,12901,
#Partially deleted in new
chr17	5419640	5432876	chr17:5419640-5432876	3	+	5420210	5432571	789624	7	651,171,61,112,64,141,335,	0,1655,3128,6330,6595,8430,12901,
#Partially deleted in new
chr17	5419640	5432715	chr17:5419640-5432715	1	+	5420210	5432549	789624	4	651,171,61,174,	0,1655,3128,12901,
#Partially deleted in new
chr17	5419640	5432876	chr17:5419640-5432876	0	+	5420210	5428083	789624	6	651,171,61,112,141,335,	0,1655,3128,6330,8430,12901,
#Partially deleted in new
chr17	5419640	5432876	chr17:5419640-5432876	0	+	5419640	5419640	8553170	5	651,171,61,329,335,	0,1655,3128,6330,12901,
#Partially deleted in new
chr17	5419640	5432876	chr17:5419640-5432876	0	+	5420210	5426246	789624	6	651,171,61,64,141,335,	0,1655,3128,6595,8430,12901,
#Partially deleted in new
chr17	5419640	5432876	chr17:5419640-5432876	0	+	5419640	5419640	8553170	6	651,171,61,329,141,335,	0,1655,3128,6330,8430,12901,
#Partially deleted in new
chr17	5419640	5432876	chr17:5419640-5432876	0	+	5420210	5426246	789624	5	651,171,61,64,335,	0,1655,3128,6595,12901,
#Partially deleted in new
chr17	5419640	5432876	chr17:5419640-5432876	0	+	5420210	5428078	789624	5	651,171,61,141,335,	0,1655,3128,8430,12901,
#Partially deleted in new
chr17	5419887	5432608	chr17:5419887-5432608	1	+	5420210	5432563	789624	5	404,171,61,112,67,	0,1408,2881,6083,12654,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	5420166	5423069	chr17:5420166-5423069	0	+	5420166	5420166	8553170	3	125,171,301,	0,1129,2602,
#Partially deleted in new
chr17	5420184	5428355	chr17:5420184-5428355	0	+	5420184	5420184	8553170	5	107,171,61,329,285,	0,1111,2584,5786,7886,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	5420184	5431484	chr17:5420184-5431484	0	+	5420210	5426246	789624	5	107,171,61,64,3414,	0,1111,2584,6051,7886,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	5420188	5421924	chr17:5420188-5421924	0	+	5420188	5420188	8553170	2	103,629,	0,1107,
#Partially deleted in new
chr17	5420199	5428653	chr17:5420199-5428653	1	+	5420210	5428277	789624	6	92,171,61,112,64,583,	0,1096,2569,5771,6036,7871,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	5420199	5432704	chr17:5420199-5432704	0	+	5420199	5420199	8553170	5	92,171,61,2241,163,	0,1096,2569,5771,12342,
#Partially deleted in new
chr17	5420201	5428309	chr17:5420201-5428309	1	+	5420210	5428078	789624	4	90,171,61,239,	0,1094,2567,7869,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	5425138	5432876	chr17:5425138-5432876	3	-	5425138	5425138	8553170	2	355,1583,	0,6155,
#Partially deleted in new
chr17	5432776	5439155	chr17:5432776-5439155	3	-	5433014	5439073	0	6	388,123,99,94,151,314,	0,516,892,2096,5346,6065,
#Partially deleted in new
chr17	5432800	5438778	chr17:5432800-5438778	1	-	5433014	5438193	789624	6	364,123,99,94,151,70,	0,492,868,2072,5322,5908,
#Partially deleted in new
chr17	5433018	5448830	chr17:5433018-5448830	0	-	5433018	5438193	789624	6	146,123,99,94,151,75,	0,274,650,1854,5104,15737,
#Deleted in new
chr17	5433071	5434110	chr17:5433071-5434110	0	-	5433071	5433071	8553170	2	93,818,	0,221,
#Deleted in new
chr17	5433142	5433853	chr17:5433142-5433853	0	-	5433142	5433142	8553170	3	22,123,185,	0,150,526,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	5434664	5439155	chr17:5434664-5439155	0	-	5434664	5434664	8553170	3	302,151,314,	0,3458,4177,
#Deleted in new
chr17	5438166	5438767	chr17:5438166-5438767	0	-	5438166	5438193	789624	2	107,276,	0,325,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	5440911	5469060	chr17:5440911-5469060	3	-	5444204	5468859	789624	12	3602,87,204,128,89,160,112,186,171,228,161,490,	0,7897,9291,9895,12668,12909,14248,15085,20027,21407,22617,27659,
#Partially deleted in new
chr17	5443488	5468916	chr17:5443488-5468916	1	-	5444204	5468859	789624	8	1025,87,204,128,89,160,186,346,	0,5320,6714,7318,10091,10332,12508,25082,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	5443488	5461363	chr17:5443488-5461363	0	-	5443488	5443488	8553170	9	1025,87,204,128,89,160,112,186,425,	0,5320,6714,7318,10091,10332,11671,12508,17450,
#Partially deleted in new
chr17	5443492	5468748	chr17:5443492-5468748	0	-	5444204	5468748	789624	11	1021,87,204,128,89,160,112,186,171,228,178,	0,5316,6710,7314,10087,10328,11667,12504,17446,18826,25078,
#Partially deleted in new
chr17	5444097	5468829	chr17:5444097-5468829	0	-	5462523	5468829	789624	11	416,87,204,128,89,160,112,186,171,228,259,	0,4711,6105,6709,9482,9723,11062,11899,16841,18221,24473,
#Partially deleted in new
chr17	5469091	5470360	chr17:5469091-5470360	3	+	5469091	5469091	789624	3	48,81,269,	0,822,1000,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	5471250	5486217	chr17:5471250-5486217	3	-	5474683	5486161	789624	7	3539,91,196,94,74,66,149,	0,8803,9136,10045,11558,13900,14818,
#Partially deleted in new
chr17	5474308	5480273	chr17:5474308-5480273	0	-	5474308	5474308	8553170	2	481,220,	0,5745,
#Partially deleted in new
chr17	5474451	5486162	chr17:5474451-5486162	1	-	5480078	5486161	789624	4	338,91,66,94,	0,5602,10699,11617,
#Partially deleted in new
chr17	5474609	5486178	chr17:5474609-5486178	1	-	5480078	5486161	789624	7	180,91,42,94,74,66,110,	0,5444,6491,6686,8199,10541,11459,
#Partially deleted in new
chr17	5474609	5482879	chr17:5474609-5482879	0	-	5474683	5482879	789624	6	180,91,73,42,94,71,	0,5444,5777,6491,6686,8199,
#Partially deleted in new
chr17	5474726	5486148	chr17:5474726-5486148	0	-	5480563	5486148	789624	6	63,91,196,74,66,80,	0,5327,5660,8082,10424,11342,
#Partially deleted in new
chr17	5477896	5486159	chr17:5477896-5486159	0	-	5481126	5486159	789624	7	103,91,157,42,74,66,91,	0,2157,2490,3204,4912,7254,8172,
#Partially deleted in new
chr17	5480070	5486178	chr17:5480070-5486178	0	-	5480070	5486161	789624	7	74,157,42,94,74,66,110,	0,316,1030,1225,2738,5080,5998,
#Partially deleted in new
chr17	5480123	5486276	chr17:5480123-5486276	0	-	5485203	5486161	789624	3	21,66,414,	0,5027,5739,
#Partially deleted in new
chr17	5480399	5486165	chr17:5480399-5486165	0	-	5485203	5486161	789624	5	144,289,74,66,303,	0,701,2409,4751,5463,
#Partially deleted in new
chr17	5480509	5486183	chr17:5480509-5486183	0	-	5480509	5480509	8553170	4	880,74,66,67,	0,2299,4641,5607,
#Partially deleted in new
chr17	5482269	5486175	chr17:5482269-5486175	0	-	5482269	5482269	8553170	3	613,66,107,	0,2881,3799,
#Partially deleted in new
chr17	5482809	5486811	chr17:5482809-5486811	0	-	5482809	5482809	8553170	3	73,66,428,	0,2341,3574,
#Partially deleted in new
chr17	5486284	5489237	chr17:5486284-5489237	0	+	5488862	5489237	789624	2	136,415,	0,2538,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	5486373	5490808	chr17:5486373-5490808	3	+	5488862	5489480	0	3	311,394,1986,	0,1822,2449,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	5486395	5490737	chr17:5486395-5490737	1	+	5488862	5489480	0	2	289,1915,	0,2427,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	5486576	5487159	chr17:5486576-5487159	0	+	5486576	5486576	8553170	2	108,159,	0,424,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	5486926	5490814	chr17:5486926-5490814	1	+	5488862	5489480	0	3	119,394,1992,	0,1269,1896,
#Partially deleted in new
chr17	5499426	5584509	chr17:5499426-5584509	0	-	5501813	5583957	0	17	524,136,142,132,263,224,163,93,92,90,171,171,171,1705,204,177,823,	0,2310,18319,21454,22097,31054,33395,33865,34470,37424,39988,42430,53959,58912,82432,83243,84260,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	5499427	5502963	chr17:5499427-5502963	0	-	5499427	5499427	8553170	2	523,1227,	0,2309,
#Deleted in new
chr17	5499438	5501145	chr17:5499438-5501145	0	-	5499438	5499438	8553170	2	512,1115,	0,592,
#Partially deleted in new
chr17	5501384	5584531	chr17:5501384-5584531	1	-	5501813	5583957	0	16	488,142,132,263,224,163,93,92,90,171,171,171,1705,204,177,845,	0,16361,19496,20139,29096,31437,31907,32512,35466,38030,40472,52001,56954,80474,81285,82302,
#Partially deleted in new
chr17	5501813	5584512	chr17:5501813-5584512	1	-	5501813	5583957	0	17	59,142,132,263,224,163,93,92,90,171,171,171,1705,204,177,417,220,	0,15932,19067,19710,28667,31008,31478,32083,35037,37601,40043,51572,56525,80045,80856,81873,82479,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	5502291	5518565	chr17:5502291-5518565	0	-	5502291	5502291	8553170	2	3686,820,	0,15454,
#Partially deleted in new
chr17	5512039	5512537	chr17:5512039-5512537	7	-	5512039	5512039	16724991	1	498,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr17	5514121	5584479	chr17:5514121-5584479	1	-	5514753	5583957	0	16	952,45,142,263,224,163,81,92,90,171,171,171,1705,204,177,793,	0,1351,3624,7402,16359,18700,19182,19775,22729,25293,27735,39264,44217,67737,68548,69565,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr17	5514126	5584448	chr17:5514126-5584448	1	-	5514753	5583957	0	17	947,45,142,263,224,163,81,92,90,171,171,171,1705,204,177,273,156,	0,1346,3619,7397,16354,18695,19177,19770,22724,25288,27730,39259,44212,67732,68543,69560,70166,
#Partially deleted in new
chr17	5514753	5584512	chr17:5514753-5584512	1	-	5514753	5583957	0	17	320,45,142,263,224,163,81,92,90,171,171,171,1705,204,177,417,220,	0,719,2992,6770,15727,18068,18550,19143,22097,24661,27103,38632,43585,67105,67916,68933,69539,
#Partially deleted in new
chr17	5514753	5583957	chr17:5514753-5583957	1	-	5514753	5583957	0	16	320,45,142,132,263,224,163,81,92,171,171,171,1705,204,177,271,	0,719,2992,6127,6770,15727,18068,18550,19143,24661,27103,38632,43585,67105,67916,68933,
#Partially deleted in new
chr17	5514753	5583957	chr17:5514753-5583957	1	-	5514753	5583957	0	17	320,45,142,132,263,224,163,81,92,90,171,171,171,1705,204,177,271,	0,719,2992,6127,6770,15727,18068,18550,19143,22097,24661,27103,38632,43585,67105,67916,68933,
#Partially deleted in new
chr17	5514753	5583957	chr17:5514753-5583957	1	-	5514753	5583957	0	15	320,45,142,263,224,163,81,92,171,171,171,1705,204,177,271,	0,719,2992,6770,15727,18068,18550,19143,24661,27103,38632,43585,67105,67916,68933,
#Partially deleted in new
chr17	5514753	5584512	chr17:5514753-5584512	3	-	5514753	5583957	0	18	320,45,142,132,263,224,163,81,92,90,171,171,171,1705,204,177,417,220,	0,719,2992,6127,6770,15727,18068,18550,19143,22097,24661,27103,38632,43585,67105,67916,68933,69539,
#Partially deleted in new
chr17	5514753	5584512	chr17:5514753-5584512	1	-	5514753	5583957	0	17	320,45,142,132,263,224,163,81,92,171,171,171,1705,204,177,417,220,	0,719,2992,6127,6770,15727,18068,18550,19143,24661,27103,38632,43585,67105,67916,68933,69539,
#Partially deleted in new
chr17	5529894	5584512	chr17:5529894-5584512	0	-	5529894	5529894	8553170	14	164,224,163,81,92,90,171,171,171,1705,204,177,417,220,	0,586,2927,3409,4002,6956,9520,11962,23491,28444,51964,52775,53792,54398,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	5583850	5619424	chr17:5583850-5619424	0	-	5583850	5583957	789624	3	253,208,94,	0,442,35480,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	5584016	5619424	chr17:5584016-5619424	0	-	5584016	5584016	8553170	2	484,94,	0,35314,
#Deleted in new
chr17	5730288	5731085	chr17:5730288-5731085	7	+	5730288	5730288	16724991	1	797,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	5772233	5930696	chr17:5772233-5930696	3	+	5772233	5772233	789624	4	794,36,74,917,	0,64947,116523,157546,
#Partially deleted in new
chr17	5772925	6080792	chr17:5772925-6080792	3	+	6080658	6080792	789624	5	102,69,74,92,422,	0,64255,115831,217004,307445,
#Partially deleted in new
chr17	6057806	6080649	chr17:6057806-6080649	0	+	6057806	6057806	8553170	2	244,279,	0,22564,
#Partially deleted in new
chr17	6069105	6124427	chr17:6069105-6124427	3	+	6080658	6120661	789624	9	102,715,115,185,122,160,165,201,4119,	0,11265,18884,21215,25996,40501,41665,48882,51203,
#Partially deleted in new
chr17	6069116	6120738	chr17:6069116-6120738	1	+	6069232	6120661	789624	8	195,115,185,122,160,165,201,430,	0,18873,21204,25985,40490,41654,48871,51192,
#Partially deleted in new
chr17	6070423	6088104	chr17:6070423-6088104	0	+	6080658	6088104	789624	3	229,715,115,	0,9947,17566,
#Partially deleted in new
chr17	6070613	6124425	chr17:6070613-6124425	1	+	6080658	6120661	789624	9	39,715,115,185,122,160,165,201,4117,	0,9757,17376,19707,24488,38993,40157,47374,49695,
#Partially deleted in new
chr17	6071107	6121300	chr17:6071107-6121300	1	+	6080658	6120661	789624	10	64,715,115,185,122,160,165,201,435,503,	0,9263,16882,19213,23994,38499,39663,46880,49201,49690,
#Partially deleted in new
chr17	6071107	6120710	chr17:6071107-6120710	1	+	6080658	6120661	789624	9	64,715,115,185,122,160,165,201,402,	0,9263,16882,19213,23994,38499,39663,46880,49201,
#Partially deleted in new
chr17	6077949	6080920	chr17:6077949-6080920	0	+	6080658	6080920	789624	2	127,550,	0,2421,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	6080146	6080794	chr17:6080146-6080794	0	+	6080658	6080794	789624	2	146,424,	0,224,
#Partially deleted in new
chr17	6080743	6121301	chr17:6080743-6121301	0	+	6080743	6090388	789624	7	342,185,122,160,165,201,993,	0,9577,14358,28863,30027,37244,39565,
#Partially deleted in new
chr17	6081881	6090361	chr17:6081881-6090361	0	+	6088066	6090361	789624	4	89,229,135,41,	0,2901,6088,8439,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	6189360	6189863	chr17:6189360-6189863	0	-	6189360	6189360	8553170	1	503,	0,
#Deleted in new
chr17	6189453	6190541	chr17:6189453-6190541	3	-	6189453	6189453	8553170	3	101,136,88,	0,271,1000,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	6207162	6207269	chr17:6207162-6207269	3	+	6207162	6207162	8553170	1	107,	0,
#Partially deleted in new
chr17	6322412	6323228	chr17:6322412-6323228	7	-	6322412	6322412	16724991	2	348,128,	0,688,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	6373832	6375080	chr17:6373832-6375080	3	-	6373832	6373832	8553170	2	613,143,	0,1105,
#Partially deleted in new
chr17	6393692	6435079	chr17:6393692-6435079	0	-	6393692	6435079	789624	3	158,180,71,	0,40226,41316,
#Partially deleted in new
chr17	6417684	6418264	chr17:6417684-6418264	7	+	6417684	6417684	16724991	2	211,67,	0,513,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	6423736	6435132	chr17:6423736-6435132	0	-	6434066	6435104	789624	6	2094,142,177,189,180,182,	0,2878,3144,4581,10182,11214,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	6423736	6435185	chr17:6423736-6435185	3	-	6425459	6435104	0	6	2094,142,177,189,180,177,	0,2878,3144,4581,10182,11272,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	6423737	6435199	chr17:6423737-6435199	1	-	6425459	6435104	0	5	2093,142,177,180,191,	0,2877,3143,10181,11271,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	6424533	6435133	chr17:6424533-6435133	1	-	6425459	6435104	789624	6	1297,142,177,189,144,125,	0,2081,2347,3784,9385,10475,
#Partially deleted in new
chr17	6425304	6435121	chr17:6425304-6435121	1	-	6426585	6435104	789624	5	1452,177,189,180,113,	0,1576,3013,8614,9704,
#Partially deleted in new
chr17	6425400	6435152	chr17:6425400-6435152	1	-	6425459	6435104	0	6	430,142,177,189,114,144,	0,1214,1480,2917,8518,9608,
#Partially deleted in new
chr17	6425400	6435152	chr17:6425400-6435152	1	-	6425459	6435104	0	6	430,70,177,189,180,144,	0,1214,1480,2917,8518,9608,
#Partially deleted in new
chr17	6425405	6435152	chr17:6425405-6435152	1	-	6425459	6435104	0	5	425,142,177,189,144,	0,1209,1475,2912,9603,
#Partially deleted in new
chr17	6426188	6435120	chr17:6426188-6435120	1	-	6426585	6435104	789624	5	568,153,189,180,112,	0,692,2129,7730,8820,
#Partially deleted in new
chr17	6426884	6435107	chr17:6426884-6435107	0	-	6426884	6435104	789624	4	185,189,180,99,	0,1433,7034,8124,
#Partially deleted in new
chr17	6444414	6451469	chr17:6444414-6451469	3	+	6445110	6450058	789624	6	74,329,296,96,45,1108,	0,661,3048,4897,5613,5947,
#Partially deleted in new
chr17	6444440	6451065	chr17:6444440-6451065	1	+	6445110	6450422	789624	5	48,329,296,96,704,	0,635,3022,4871,5921,
#Partially deleted in new
chr17	6444441	6450441	chr17:6444441-6450441	0	+	6445110	6449320	789624	6	47,267,296,96,45,80,	0,634,3021,4870,5586,5920,
#Partially deleted in new
chr17	6444442	6450365	chr17:6444442-6450365	1	+	6445110	6449761	789624	7	46,329,296,96,75,45,4,	0,633,3020,4869,5261,5585,5919,
#Partially deleted in new
chr17	6444442	6449938	chr17:6444442-6449938	1	+	6445110	6449761	789624	5	46,329,296,96,235,	0,633,3020,4869,5261,
#Partially deleted in new
chr17	6444445	6451055	chr17:6444445-6451055	1	+	6445110	6450422	789624	6	43,329,93,296,96,694,	0,630,1649,3017,4866,5916,
#Partially deleted in new
chr17	6444474	6450291	chr17:6444474-6450291	1	+	6445110	6450058	789624	6	14,329,296,96,45,53,	0,601,2988,4837,5553,5764,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	6447346	6449549	chr17:6447346-6449549	0	+	6447346	6447346	8553170	2	412,238,	0,1965,
#Partially deleted in new
chr17	6447494	6450595	chr17:6447494-6450595	0	+	6447494	6450058	789624	3	264,96,568,	0,1817,2533,
#Partially deleted in new
chr17	6451263	6556460	chr17:6451263-6556460	1	-	6455337	6556406	789624	19	4380,129,184,150,149,117,117,149,195,171,173,185,123,190,236,77,48,96,76,	0,6330,10109,12468,12906,13391,16961,18996,19897,21393,23168,25765,26711,27283,32253,32952,52263,86723,105121,
#Partially deleted in new
chr17	6451264	6556494	chr17:6451264-6556494	3	-	6455337	6556406	789624	20	4379,129,184,150,149,117,117,149,195,171,173,185,123,190,236,77,48,108,96,110,	0,6329,10108,12467,12905,13390,16960,18995,19896,21392,23167,25764,26710,27282,32252,32951,52262,74091,86722,105120,
#Partially deleted in new
chr17	6455390	6473216	chr17:6455390-6473216	0	-	6455390	6455390	8553170	11	253,129,184,150,149,117,117,149,173,171,29,	0,2203,5982,8341,8779,9264,12834,14869,15770,17266,17797,
#Partially deleted in new
chr17	6455399	6481829	chr17:6455399-6481829	0	-	6455399	6455399	8553170	14	244,129,184,150,149,117,117,149,195,171,173,185,123,3283,	0,2194,5973,8332,8770,9255,12825,14860,15761,17257,19032,21629,22575,23147,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	6460568	6463881	chr17:6460568-6463881	0	-	6460953	6463881	789624	3	400,184,150,	0,804,3163,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	6578147	6594999	chr17:6578147-6594999	0	-	6578265	6594999	789624	4	134,225,121,28,	0,11631,12362,16824,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr17	6578150	6640927	chr17:6578150-6640927	3	-	6579746	6635103	789624	19	1714,225,121,82,186,84,79,90,90,117,167,230,211,216,63,107,625,161,291,	0,11628,12359,16821,18007,21086,22229,28722,29030,30197,31843,33768,42637,44731,45358,46604,49966,56860,62486,
#Partially deleted in new
chr17	6579210	6635173	chr17:6579210-6635173	0	-	6623542	6635103	789624	17	654,225,121,82,186,84,79,90,90,117,167,230,211,216,63,625,163,	0,10568,11299,15761,16947,20026,21169,27662,27970,29137,30783,32708,41577,43671,44298,48906,55800,
#Partially deleted in new
chr17	6579388	6640711	chr17:6579388-6640711	1	-	6579746	6623088	789624	18	476,225,121,82,186,84,79,90,90,117,167,230,211,216,82,107,625,75,	0,10390,11121,15583,16769,19848,20991,27484,27792,28959,30605,32530,41399,43493,44218,45366,48728,61248,
#Partially deleted in new
chr17	6579653	6620907	chr17:6579653-6620907	0	-	6610143	6620907	789624	12	211,225,121,82,186,84,79,90,90,117,167,120,	0,10125,10856,15318,16504,19583,20726,27219,27527,28694,30340,41134,
#Partially deleted in new
chr17	6589806	6606928	chr17:6589806-6606928	0	-	6589806	6589806	8553170	7	197,69,82,186,84,79,56,	0,703,5165,6351,9430,10573,17066,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	6600943	6601051	chr17:6600943-6601051	7	-	6600943	6600943	16724991	1	108,	0,
#Partially deleted in new
chr17	6620929	6628282	chr17:6620929-6628282	0	-	6623962	6628282	789624	4	69,216,400,166,	0,1952,2677,7187,
#Partially deleted in new
chr17	6623936	6628487	chr17:6623936-6628487	0	-	6623936	6623936	8553170	3	70,107,371,	0,818,4180,
#Partially deleted in new
chr17	6628572	6640662	chr17:6628572-6640662	0	-	6628572	6635103	789624	4	169,161,234,26,	0,6438,6828,12064,
#Partially deleted in new
chr17	6628618	6636428	chr17:6628618-6636428	0	-	6628618	6635103	789624	3	123,161,531,	0,6392,7279,
#Deleted in new
chr17	6634740	6640652	chr17:6634740-6640652	0	-	6634740	6634740	8553170	2	431,16,	0,5896,
#Deleted in new
chr17	6636779	6640316	chr17:6636779-6640316	3	-	6636779	6636779	8553170	1	3537,	0,
#Deleted in new
chr17	6640757	6644541	chr17:6640757-6644541	3	+	6641082	6643019	0	4	470,82,76,1591,	0,995,1491,2193,
#Deleted in new
chr17	6640984	6643067	chr17:6640984-6643067	0	+	6640984	6640984	8553170	4	116,82,76,117,	0,768,1264,1966,
#Deleted in new
chr17	6641015	6643114	chr17:6641015-6643114	1	+	6641082	6643019	789624	4	137,82,76,164,	0,737,1233,1935,
#Deleted in new
chr17	6641023	6643123	chr17:6641023-6643123	0	+	6641023	6641023	8553170	1	2100,	0,
#Deleted in new
chr17	6641026	6642357	chr17:6641026-6642357	0	+	6641026	6641026	8553170	3	201,82,109,	0,726,1222,
#Deleted in new
chr17	6641033	6643116	chr17:6641033-6643116	0	+	6641082	6641835	789624	4	194,180,76,166,	0,719,1215,1917,
#Deleted in new
chr17	6641042	6643429	chr17:6641042-6643429	1	+	6641082	6642966	789624	3	185,82,479,	0,710,1908,
#Deleted in new
chr17	6641307	6643119	chr17:6641307-6643119	0	+	6641307	6641307	8553170	4	191,82,76,169,	0,445,941,1643,
#Deleted in new
chr17	6641465	6643120	chr17:6641465-6643120	0	+	6641465	6641465	8553170	4	177,82,76,170,	0,287,783,1485,
#Deleted in new
chr17	6641657	6643117	chr17:6641657-6643117	0	+	6641657	6641657	8553170	3	177,76,167,	0,591,1293,
#Partially deleted in new
chr17	6643314	6651634	chr17:6643314-6651634	3	-	6644466	6651528	789624	4	1345,97,78,134,	0,6667,7041,8186,
#Partially deleted in new
chr17	6644278	6651634	chr17:6644278-6651634	1	-	6644633	6651528	789624	3	381,78,134,	0,6077,7222,
#Partially deleted in new
chr17	6644294	6651427	chr17:6644294-6651427	1	-	6644466	6644640	789624	4	365,97,78,79,	0,5687,6061,7054,
#Partially deleted in new
chr17	6649888	6651575	chr17:6649888-6651575	0	-	6649888	6649888	8553170	2	545,75,	0,1612,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	6651717	6653473	chr17:6651717-6653473	3	+	6651913	6652270	789624	1	1756,	0,
#Partially deleted in new
chr17	6651870	6693202	chr17:6651870-6693202	0	+	6651913	6652270	789624	2	724,338,	0,40994,
#Partially deleted in new
chr17	6652163	6684937	chr17:6652163-6684937	0	+	6652163	6652270	789624	2	431,380,	0,32394,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	6653463	6655009	chr17:6653463-6655009	3	-	6653463	6653463	8553170	2	760,119,	0,1427,
#Deleted in new
chr17	6655439	6655509	chr17:6655439-6655509	3	-	6655439	6655439	5263520	1	70,	0,
#Deleted in new
chr17	6655448	6655502	chr17:6655448-6655502	3	+	6655448	6655448	5263520	1	54,	0,
#Partially deleted in new
chr17	6657033	6693211	chr17:6657033-6693211	7	+	6657033	6657033	16724991	4	371,139,152,347,	0,611,32842,35831,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	6657213	6661413	chr17:6657213-6661413	5	+	6657213	6657213	16724991	7	191,82,123,73,161,144,210,	0,488,648,1268,1540,2711,3990,
#Partially deleted in new
chr17	6657215	6661326	chr17:6657215-6661326	4	+	6657215	6657215	16724991	5	189,217,161,144,123,	0,429,1538,2709,3988,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	6657303	6658491	chr17:6657303-6658491	4	+	6657303	6657303	16724991	4	101,139,123,337,	0,341,558,851,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	6657303	6663010	chr17:6657303-6663010	4	+	6657303	6657303	16724991	5	101,217,161,207,1807,	0,341,1450,2558,3900,
#Partially deleted in new
chr17	6657718	6660057	chr17:6657718-6660057	4	+	6657718	6657718	16724991	4	65,123,161,133,	0,143,1035,2206,
#Partially deleted in new
chr17	6657758	6693577	chr17:6657758-6693577	5	+	6657758	6657758	16724991	3	103,161,713,	0,995,35106,
#Partially deleted in new
chr17	6684712	6713567	chr17:6684712-6713567	3	-	6686206	6713333	789624	12	1626,138,162,119,101,216,123,169,179,137,129,336,	0,2816,6066,8331,9384,11013,16291,18257,19165,21929,22315,28519,
#Partially deleted in new
chr17	6684722	6713369	chr17:6684722-6713369	1	-	6686206	6713333	789624	12	1616,138,162,119,101,216,123,169,128,137,129,138,	0,2806,6056,8321,9374,11003,16281,18247,19155,21919,22305,28509,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	6684722	6690120	chr17:6684722-6690120	0	-	6684722	6684722	8553170	1	5398,	0,
#Partially deleted in new
chr17	6686079	6713366	chr17:6686079-6713366	1	-	6686206	6713333	789624	11	259,138,162,119,101,216,123,169,179,137,135,	0,1449,4699,6964,8017,9646,14924,16890,17798,20562,27152,
#Partially deleted in new
chr17	6686096	6713377	chr17:6686096-6713377	1	-	6686206	6713333	789624	11	242,162,119,101,216,123,169,179,137,129,146,	0,4682,6947,8000,9629,14907,16873,17781,20545,20931,27135,
#Partially deleted in new
chr17	6687353	6690884	chr17:6687353-6690884	0	-	6687489	6690884	789624	2	313,106,	0,3425,
#Partially deleted in new
chr17	6689961	6695889	chr17:6689961-6695889	0	-	6689961	6689961	8553170	5	72,162,119,101,164,	0,817,3082,4135,5764,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	6695407	6705557	chr17:6695407-6705557	0	-	6695407	6695407	8553170	4	534,123,169,1680,	0,5596,7562,8470,
#Partially deleted in new
chr17	6695816	6713359	chr17:6695816-6713359	0	-	6706759	6713333	789624	7	125,123,169,179,137,125,128,	0,5187,7153,8061,10825,11215,17415,
#Partially deleted in new
chr17	6703072	6713369	chr17:6703072-6713369	0	-	6703072	6713333	789624	5	66,179,137,18,138,	0,805,3569,3955,10159,
#Partially deleted in new
chr17	6703880	6713371	chr17:6703880-6713371	0	-	6703880	6703880	8553170	4	176,137,121,140,	0,2761,3147,9351,
#Partially deleted in new
chr17	6704035	6713369	chr17:6704035-6713369	0	-	6706855	6713333	789624	4	21,259,129,138,	0,2606,2992,9196,
#Deleted in new
chr17	6749684	6749978	chr17:6749684-6749978	7	-	6749684	6749684	16724991	1	294,	0,
#Deleted in new
chr17	6749717	6750188	chr17:6749717-6750188	7	+	6749717	6749717	16724991	1	471,	0,
#Partially deleted in new
chr17	6755446	6758632	chr17:6755446-6758632	0	+	6755446	6755446	8553170	3	205,69,544,	0,595,2642,
#Partially deleted in new
chr17	6755447	6771928	chr17:6755447-6771928	0	+	6756078	6759474	789624	6	663,136,463,196,86,1286,	0,2641,3808,4958,6707,15195,
#Partially deleted in new
chr17	6755450	6758329	chr17:6755450-6758329	0	+	6755450	6755450	8553170	3	201,120,241,	0,540,2638,
#Partially deleted in new
chr17	6755564	6760581	chr17:6755564-6760581	0	+	6756078	6760581	789624	5	87,120,136,57,176,	0,426,2524,4097,4841,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	6755837	6773663	chr17:6755837-6773663	1	+	6756078	6773169	0	6	273,136,196,86,342,551,	0,2251,4568,6317,14805,17275,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	6755839	6775647	chr17:6755839-6775647	3	+	6756078	6773169	0	7	271,136,57,196,86,342,2535,	0,2249,3822,4566,6315,14803,17273,
#Partially deleted in new
chr17	6756045	6762193	chr17:6756045-6762193	0	+	6756078	6761959	789624	5	65,136,196,152,39,	0,2043,4360,5840,6109,
#Partially deleted in new
chr17	6756045	6759556	chr17:6756045-6759556	0	+	6756045	6756045	8553170	3	65,175,301,	0,2043,3210,
#Partially deleted in new
chr17	6756047	6758175	chr17:6756047-6758175	0	+	6756047	6756047	8553170	2	209,87,	0,2041,
#Partially deleted in new
chr17	6756052	6758716	chr17:6756052-6758716	0	+	6756052	6756052	8553170	3	58,136,247,	0,2036,2417,
#Partially deleted in new
chr17	6756054	6770969	chr17:6756054-6770969	0	+	6756078	6761959	789624	7	56,136,57,196,152,86,327,	0,2034,3607,4351,5831,6100,14588,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	6756061	6774108	chr17:6756061-6774108	0	+	6756078	6762211	789624	5	49,136,86,342,996,	0,2027,6093,14581,17051,
#Partially deleted in new
chr17	6756066	6762206	chr17:6756066-6762206	0	+	6756078	6762206	789624	6	44,136,98,57,196,52,	0,2022,2795,3595,4339,6088,
#Partially deleted in new
chr17	6756066	6762025	chr17:6756066-6762025	0	+	6756078	6759864	789624	5	44,136,41,196,140,	0,2022,3774,4339,5819,
#Partially deleted in new
chr17	6756076	6760479	chr17:6756076-6760479	0	+	6756078	6759474	789624	5	34,136,264,57,74,	0,2012,3179,3585,4329,
#Partially deleted in new
chr17	6756078	6773169	chr17:6756078-6773169	0	+	6756078	6770647	0	5	32,136,196,342,57,	0,2010,4327,14564,17034,
#Partially deleted in new
chr17	6756078	6773169	chr17:6756078-6773169	0	+	6756078	6770647	0	6	32,136,57,196,342,57,	0,2010,3583,4327,14564,17034,
#Deleted in new
chr17	6757396	6758592	chr17:6757396-6758592	0	+	6757396	6757396	8553170	2	35,504,	0,692,
#Partially deleted in new
chr17	6761717	6770780	chr17:6761717-6770780	0	+	6761717	6761717	8553170	2	523,138,	0,8925,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	6772830	6776116	chr17:6772830-6776116	3	-	6772830	6772830	8553170	1	3286,	0,
#Partially deleted in new
chr17	6776222	6787646	chr17:6776222-6787646	3	+	6779868	6787428	789624	4	50,1103,177,347,	0,3566,10557,11077,
#Partially deleted in new
chr17	6786814	6796635	chr17:6786814-6796635	0	+	6786814	6789709	789624	4	142,60,75,640,	0,2886,7961,9181,
#Partially deleted in new
chr17	6786869	6797101	chr17:6786869-6797101	0	+	6786869	6794799	789624	3	87,75,1106,	0,7906,9126,
#Partially deleted in new
chr17	6789132	6813016	chr17:6789132-6813016	0	-	6789321	6813016	789624	2	198,186,	0,23698,
#Partially deleted in new
chr17	6797992	6831761	chr17:6797992-6831761	3	-	6800026	6830376	789624	8	2242,197,223,144,129,166,207,113,	0,2754,14838,17170,17841,21200,32194,33656,
#Partially deleted in new
chr17	6799660	6831761	chr17:6799660-6831761	0	-	6815909	6830376	789624	7	574,197,223,144,129,207,113,	0,1086,13170,15502,16173,30526,31988,
#Partially deleted in new
chr17	6799980	6815177	chr17:6799980-6815177	0	-	6800039	6815177	789624	3	254,223,15,	0,12850,15182,
#Partially deleted in new
chr17	6814934	6831758	chr17:6814934-6831758	0	-	6814934	6814934	8553170	4	372,129,207,110,	0,899,15252,16714,
#Deleted in new
chr17	6893776	6895116	chr17:6893776-6895116	4	+	6893776	6893776	16724991	4	140,196,123,21,	0,541,1107,1319,
#Partially deleted in new
chr17	6893781	6900342	chr17:6893781-6900342	4	+	6893781	6893781	16724991	13	135,202,123,104,161,144,210,87,170,130,100,168,475,	0,536,1102,1314,1561,2534,2772,4422,4747,5018,5609,5811,6086,
#Partially deleted in new
chr17	6893781	6900032	chr17:6893781-6900032	5	+	6893781	6893781	16724991	14	135,196,55,123,101,161,144,210,87,170,130,100,168,165,	0,536,957,1102,1321,1561,2534,2772,4422,4747,5018,5609,5811,6086,
#Deleted in new
chr17	6896175	6896806	chr17:6896175-6896806	4	+	6896175	6896175	16724991	2	284,253,	0,378,
#Deleted in new
chr17	6896586	6897697	chr17:6896586-6897697	4	+	6896586	6896586	16724991	2	177,260,	0,851,
#Deleted in new
chr17	6898909	6900345	chr17:6898909-6900345	4	+	6898909	6898909	16724991	4	20,100,114,478,	0,481,683,958,
#Partially deleted in new
chr17	6899913	6954107	chr17:6899913-6954107	7	+	6899913	6899913	16724991	2	72,447,	0,53747,
#Deleted in new
chr17	6927471	6928191	chr17:6927471-6928191	7	-	6927471	6927471	16724991	1	720,	0,
#Partially deleted in new
chr17	6954097	6978960	chr17:6954097-6978960	3	-	6954097	6954097	8553170	5	202,67,110,97,63,	0,284,2490,4767,24800,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	6985108	7012334	chr17:6985108-7012334	0	-	6985108	6985108	789624	3	432,94,139,	0,24687,27087,
#Deleted in new
chr17	6994641	6995189	chr17:6994641-6995189	3	-	6994641	6994641	8553170	2	67,276,	0,272,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	6996064	7010736	chr17:6996064-7010736	3	+	6996117	7010423	0	14	188,202,82,123,104,161,144,210,87,170,122,101,171,493,	0,761,2444,2650,2888,3241,4271,5537,9192,9793,10421,13682,13891,14179,
#Partially deleted in new
chr17	6996981	7000469	chr17:6996981-7000469	0	+	6996981	7000469	789624	5	46,82,123,58,134,	0,1527,1733,2427,3354,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	6999146	7012331	chr17:6999146-7012331	1	-	6999146	6999146	8553170	5	440,137,94,79,136,	0,3337,10649,10912,13049,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	6999309	7012338	chr17:6999309-7012338	0	-	6999309	6999309	8553170	3	277,137,143,	0,3174,12886,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	6999398	7012349	chr17:6999398-7012349	0	-	6999398	6999398	8553170	4	188,137,94,154,	0,3085,10397,12797,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	7001131	7012342	chr17:7001131-7012342	1	-	7001131	7001131	8553170	3	1489,94,147,	0,8664,11064,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	7002279	7012349	chr17:7002279-7012349	0	-	7002279	7002279	8553170	2	341,154,	0,9916,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	7009488	7010736	chr17:7009488-7010736	0	+	7009488	7009488	8553170	3	359,171,493,	0,467,755,
#Partially deleted in new
chr17	7012416	7014532	chr17:7012416-7014532	1	+	7012566	7014286	789624	3	345,77,388,	0,1249,1728,
#Partially deleted in new
chr17	7012460	7014520	chr17:7012460-7014520	0	+	7012566	7013321	789624	4	301,198,77,376,	0,858,1205,1684,
#Partially deleted in new
chr17	7012610	7014482	chr17:7012610-7014482	3	+	7012683	7014286	789624	3	151,77,338,	0,1055,1534,
#Partially deleted in new
chr17	7012621	7014330	chr17:7012621-7014330	1	+	7013668	7014286	789624	3	140,99,186,	0,1022,1523,
#Partially deleted in new
chr17	7012631	7014532	chr17:7012631-7014532	1	+	7013668	7014286	789624	3	126,77,388,	0,1034,1513,
#Partially deleted in new
chr17	7012634	7017502	chr17:7012634-7017502	0	+	7012634	7012634	8553170	7	127,77,1012,102,191,105,242,	0,1031,1510,3139,3860,4275,4626,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	7012645	7014532	chr17:7012645-7014532	0	+	7012645	7012645	8553170	2	1097,388,	0,1499,
#Partially deleted in new
chr17	7012645	7014530	chr17:7012645-7014530	1	+	7012683	7013712	789624	3	132,77,386,	0,1020,1499,
#Partially deleted in new
chr17	7012647	7014519	chr17:7012647-7014519	1	+	7013352	7014286	789624	4	114,217,77,375,	0,671,1018,1497,
#Partially deleted in new
chr17	7012647	7013817	chr17:7012647-7013817	0	+	7012647	7012647	8553170	2	114,499,	0,671,
#Partially deleted in new
chr17	7012659	7017520	chr17:7012659-7017520	0	+	7012659	7012659	789624	8	98,77,734,95,102,191,105,260,	0,1006,1485,2402,3114,3835,4250,4601,
#Deleted in new
chr17	7013230	7014520	chr17:7013230-7014520	0	+	7013352	7013669	789624	3	286,77,376,	0,435,914,
#Deleted in new
chr17	7013596	7015073	chr17:7013596-7015073	0	+	7013596	7013596	8553170	3	146,734,12,	0,548,1465,
#Deleted in new
chr17	7013732	7017520	chr17:7013732-7017520	3	+	7013732	7017321	789624	7	10,133,95,102,191,105,264,	0,412,1329,2041,2762,3177,3524,
#Deleted in new
chr17	7014494	7017375	chr17:7014494-7017375	1	+	7014857	7017321	789624	6	384,95,102,191,105,119,	0,567,1279,2000,2415,2762,
#Deleted in new
chr17	7014752	7017506	chr17:7014752-7017506	1	+	7014857	7017321	789624	5	126,95,102,191,250,	0,309,1021,1742,2504,
#Deleted in new
chr17	7014753	7017525	chr17:7014753-7017525	0	+	7014753	7014753	8553170	3	125,1953,265,	0,308,2507,
#Deleted in new
chr17	7014768	7017519	chr17:7014768-7017519	1	+	7014857	7017265	789624	5	110,95,191,105,259,	0,293,1726,2141,2492,
#Deleted in new
chr17	7014781	7017520	chr17:7014781-7017520	3	+	7014857	7017265	789624	6	97,95,102,191,105,260,	0,280,992,1713,2128,2479,
#Deleted in new
chr17	7015039	7017520	chr17:7015039-7017520	1	+	7015118	7017321	789624	5	117,102,191,105,264,	0,734,1455,1870,2217,
#Deleted in new
chr17	7015816	7017304	chr17:7015816-7017304	0	+	7015816	7015816	8553170	4	59,191,65,48,	0,678,1133,1440,
#Deleted in new
chr17	7015817	7019630	chr17:7015817-7019630	1	-	7015817	7015817	789624	3	197,320,253,	0,1251,3560,
#Deleted in new
chr17	7015821	7019659	chr17:7015821-7019659	3	-	7015821	7015821	8553170	1	3838,	0,
#Deleted in new
chr17	7015842	7017521	chr17:7015842-7017521	0	+	7015842	7016915	789624	4	33,31,105,261,	0,652,1067,1418,
#Deleted in new
chr17	7016164	7017520	chr17:7016164-7017520	0	+	7016164	7016164	8553170	3	171,191,264,	0,330,1092,
#Deleted in new
chr17	7017614	7017701	chr17:7017614-7017701	3	-	7017614	7017614	5263520	1	87,	0,
#Deleted in new
chr17	7017910	7018022	chr17:7017910-7018022	3	-	7017910	7017910	5263520	1	112,	0,
#Partially deleted in new
chr17	7023019	7029642	chr17:7023019-7029642	3	+	7023671	7027619	789624	9	80,191,222,363,125,165,131,138,2140,	0,640,1063,1381,2056,3437,3685,3930,4483,
#Deleted in new
chr17	7023066	7024630	chr17:7023066-7024630	0	+	7023066	7023066	8553170	4	33,191,85,230,	0,593,1153,1334,
#Deleted in new
chr17	7023101	7024304	chr17:7023101-7024304	0	+	7023671	7024304	789624	3	46,191,222,	0,558,981,
#Deleted in new
chr17	7023476	7024237	chr17:7023476-7024237	0	+	7023671	7024237	789624	2	374,155,	0,606,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	7026500	7030290	chr17:7026500-7030290	0	+	7026500	7029833	789624	4	121,131,138,475,	0,204,449,3315,
#Deleted in new
chr17	7026790	7030038	chr17:7026790-7030038	0	+	7026790	7026790	8553170	2	297,223,	0,3025,
#Partially deleted in new
chr17	7036074	7040121	chr17:7036074-7040121	3	+	7036382	7039962	789624	4	507,144,738,359,	0,652,2077,3688,
#Deleted in new
chr17	7036096	7037064	chr17:7036096-7037064	0	+	7036096	7036096	8553170	1	968,	0,
#Deleted in new
chr17	7041629	7043923	chr17:7041629-7043923	3	-	7041678	7043585	789624	4	279,768,144,612,	0,366,1300,1682,
#Deleted in new
chr17	7041629	7043923	chr17:7041629-7043923	1	-	7041678	7043513	789624	5	279,178,566,144,612,	0,366,568,1300,1682,
#Deleted in new
chr17	7041658	7043606	chr17:7041658-7043606	0	-	7041658	7041658	8553170	2	250,677,	0,1271,
#Deleted in new
chr17	7042994	7043917	chr17:7042994-7043917	0	-	7042994	7043513	789624	3	79,208,143,	0,317,780,
#Deleted in new
chr17	7058933	7059204	chr17:7058933-7059204	7	+	7058933	7058933	16724991	1	271,	0,
#Partially deleted in new
chr17	7074536	7080307	chr17:7074536-7080307	3	-	7075053	7078812	789624	9	686,107,155,168,72,96,117,140,256,	0,823,1194,1448,2196,2355,3460,4209,5515,
#Partially deleted in new
chr17	7074565	7080266	chr17:7074565-7080266	1	-	7075053	7078812	789624	9	657,107,155,87,72,96,117,140,215,	0,794,1165,1419,2167,2326,3431,4180,5486,
#Partially deleted in new
chr17	7074794	7076804	chr17:7074794-7076804	0	-	7075126	7076804	789624	4	428,155,87,72,	0,936,1190,1938,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	7074794	7080248	chr17:7074794-7080248	1	-	7075553	7078812	789624	7	1091,87,72,96,117,140,197,	0,1190,1938,2097,3202,3951,5257,
#Partially deleted in new
chr17	7074795	7080283	chr17:7074795-7080283	1	-	7075053	7078812	789624	9	427,107,155,96,72,96,117,140,232,	0,564,935,1180,1937,2096,3201,3950,5256,
#Partially deleted in new
chr17	7078483	7080244	chr17:7078483-7080244	0	-	7078483	7078483	8553170	2	402,193,	0,1568,
#Partially deleted in new
chr17	7101321	7114823	chr17:7101321-7114823	3	-	7101574	7114240	789624	9	419,107,152,87,72,96,117,137,209,	0,768,5678,5909,6514,7140,7450,12852,13293,
#Partially deleted in new
chr17	7101321	7114653	chr17:7101321-7114653	1	-	7101574	7114240	789624	9	419,107,152,87,72,96,132,282,39,	0,768,5678,5909,6514,7140,7435,12795,13293,
#Partially deleted in new
chr17	7101574	7114240	chr17:7101574-7114240	1	-	7101574	7114240	789624	8	166,107,152,87,72,96,132,67,	0,515,5425,5656,6261,6887,7182,12599,
#Partially deleted in new
chr17	7107501	7114825	chr17:7107501-7114825	0	-	7107501	7107501	8553170	5	406,96,117,225,211,	0,960,1270,6672,7113,
#Partially deleted in new
chr17	7107679	7115015	chr17:7107679-7115015	0	-	7107679	7107679	8553170	6	228,96,117,225,197,69,	0,782,1092,6494,6935,7267,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	7140929	7141592	chr17:7140929-7141592	7	+	7140929	7140929	16724991	1	663,	0,
#Partially deleted in new
chr17	7173430	7179564	chr17:7173430-7179564	3	-	7173658	7178563	0	9	403,107,152,87,72,96,117,95,375,	0,530,707,943,3399,3550,3779,5063,5759,
#Partially deleted in new
chr17	7173433	7179564	chr17:7173433-7179564	1	-	7173658	7178563	0	8	400,107,152,87,72,96,95,375,	0,527,704,940,3396,3547,5060,5756,
#Partially deleted in new
chr17	7173552	7178116	chr17:7173552-7178116	1	-	7173658	7176881	789624	8	281,107,152,87,72,96,117,32,	0,408,585,821,3277,3428,3657,4532,
#Partially deleted in new
chr17	7173557	7177046	chr17:7173557-7177046	0	-	7173956	7177046	789624	5	510,152,87,72,66,	0,580,816,3272,3423,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	7173658	7179356	chr17:7173658-7179356	1	-	7173658	7178563	0	7	175,107,152,87,72,96,863,	0,302,479,715,3171,3322,4835,
#Partially deleted in new
chr17	7173878	7177482	chr17:7173878-7177482	1	-	7173956	7174395	789624	5	189,152,87,96,273,	0,259,495,3102,3331,
#Partially deleted in new
chr17	7174423	7177631	chr17:7174423-7177631	0	-	7174423	7176881	789624	4	37,72,96,422,	0,2406,2557,2786,
#Partially deleted in new
chr17	7176613	7179376	chr17:7176613-7179376	0	-	7176613	7176613	8553170	3	288,1608,187,	0,367,2576,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	7176831	7179355	chr17:7176831-7179355	0	-	7176831	7178563	789624	5	70,96,117,406,166,	0,149,378,1662,2358,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr17	7187168	7219841	chr17:7187168-7219841	1	-	7190707	7218849	789624	22	3646,92,110,173,102,48,28,37,177,115,103,296,145,137,170,125,60,54,66,41,99,1011,	0,4098,4724,5776,6314,6498,6675,6795,7150,9051,9304,9588,15734,16024,16255,16523,16839,17030,21005,31072,31372,31662,
#Partially deleted in new
chr17	7189889	7217609	chr17:7189889-7217609	1	-	7190707	7217147	0	20	925,92,110,173,102,48,28,37,177,115,103,296,145,137,170,125,51,54,66,492,	0,1377,2003,3055,3593,3777,3954,4074,4429,6330,6583,6867,13013,13303,13534,13802,14118,14309,18284,27228,
#Partially deleted in new
chr17	7189889	7217644	chr17:7189889-7217644	1	-	7190707	7217147	0	20	925,92,110,173,102,48,28,37,177,115,103,296,145,137,170,125,60,54,66,527,	0,1377,2003,3055,3593,3777,3954,4074,4429,6330,6583,6867,13013,13303,13534,13802,14118,14309,18284,27228,
#Partially deleted in new
chr17	7189889	7192235	chr17:7189889-7192235	0	-	7189889	7189889	8553170	2	925,969,	0,1377,
#Partially deleted in new
chr17	7189894	7205130	chr17:7189894-7205130	1	-	7190707	7204037	789624	19	920,92,110,173,102,48,28,37,177,115,103,296,145,137,170,125,60,54,185,	0,1372,1998,3050,3588,3772,3949,4069,4424,6325,6578,6862,13008,13298,13529,13797,14113,14304,15051,
#Partially deleted in new
chr17	7190285	7219738	chr17:7190285-7219738	2	-	7191349	7218849	789624	21	529,92,173,102,48,28,37,177,115,103,296,145,137,170,125,60,54,66,41,99,908,	0,981,2659,3197,3381,3558,3678,4033,5934,6187,6471,12617,12907,13138,13406,13722,13913,17888,27955,28255,28545,
#Partially deleted in new
chr17	7190447	7219583	chr17:7190447-7219583	1	-	7190707	7218849	0	22	367,92,110,173,102,48,28,37,177,115,103,296,145,137,170,125,51,54,66,41,99,753,	0,819,1445,2497,3035,3219,3396,3516,3871,5772,6025,6309,12455,12745,12976,13244,13560,13751,17726,27793,28093,28383,
#Partially deleted in new
chr17	7190560	7218305	chr17:7190560-7218305	0	-	7190560	7190560	8553170	20	254,92,110,173,102,48,28,37,177,115,103,296,145,137,170,125,60,54,66,65,	0,706,1332,2384,2922,3106,3283,3403,3758,5659,5912,6196,12342,12632,12863,13131,13447,13638,17613,27680,
#Partially deleted in new
chr17	7190562	7207295	chr17:7190562-7207295	1	-	7190707	7206954	8553170	19	252,92,110,173,102,48,28,37,177,115,103,296,145,137,170,125,51,54,365,	0,704,1330,2382,2920,3104,3281,3401,3756,5657,5910,6194,12340,12630,12861,13129,13445,13636,16368,
#Partially deleted in new
chr17	7190581	7205168	chr17:7190581-7205168	1	-	7190707	7204037	789624	19	233,92,110,173,102,48,28,37,177,115,103,296,145,137,170,125,51,54,223,	0,685,1311,2363,2901,3085,3262,3382,3737,5638,5891,6175,12321,12611,12842,13110,13426,13617,14364,
#Partially deleted in new
chr17	7190611	7192210	chr17:7190611-7192210	0	-	7190611	7190611	8553170	3	203,92,318,	0,655,1281,
#Partially deleted in new
chr17	7190674	7213912	chr17:7190674-7213912	1	-	7190707	7213830	8553170	20	140,92,110,173,102,48,28,37,177,115,103,296,145,137,170,125,60,54,165,112,	0,592,1218,2270,2808,2992,3169,3289,3644,5545,5798,6082,12228,12518,12749,13017,13333,13524,17400,23126,
#Partially deleted in new
chr17	7190797	7196809	chr17:7190797-7196809	0	-	7190797	7190797	8553170	11	17,92,110,173,102,48,28,532,115,103,53,	0,469,1095,2147,2685,2869,3046,3166,5422,5675,5959,
#Partially deleted in new
chr17	7191927	7208338	chr17:7191927-7208338	0	-	7191927	7204037	8553170	17	75,173,102,48,28,37,177,115,103,296,145,137,170,125,51,54,165,	0,1017,1555,1739,1916,2036,2391,4292,4545,4829,10975,11265,11496,11764,12080,12271,16246,
#Deleted in new
chr17	7192294	7192448	chr17:7192294-7192448	3	-	7192294	7192294	8553170	1	154,	0,
#Partially deleted in new
chr17	7193533	7204635	chr17:7193533-7204635	0	-	7193533	7204037	8553170	14	51,48,28,37,177,115,103,296,145,137,170,125,60,437,	0,133,310,430,785,2686,2939,3223,9369,9659,9890,10158,10474,10665,
#Partially deleted in new
chr17	7197027	7204836	chr17:7197027-7204836	0	-	7197027	7204791	789624	8	25,145,137,170,125,60,54,57,	0,5875,6165,6396,6664,6980,7171,7752,
#Partially deleted in new
chr17	7202717	7217188	chr17:7202717-7217188	1	-	7202789	7217147	789624	8	330,137,170,125,51,54,66,71,	0,475,706,974,1290,1481,5456,14400,
#Partially deleted in new
chr17	7202763	7217233	chr17:7202763-7217233	1	-	7202789	7217147	8553170	7	284,137,170,125,60,54,116,	0,429,660,928,1244,1435,14354,
#Deleted in new
chr17	7202915	7204502	chr17:7202915-7204502	0	-	7202915	7204037	789624	6	132,137,170,125,51,304,	0,277,508,776,1092,1283,
#Deleted in new
chr17	7202980	7204934	chr17:7202980-7204934	0	-	7202980	7204791	789624	7	67,137,170,125,51,54,155,	0,212,443,711,1027,1218,1799,
#Partially deleted in new
chr17	7203198	7217206	chr17:7203198-7217206	0	-	7203198	7217147	789624	7	131,170,125,51,54,165,89,	0,225,493,809,1000,4876,13919,
#Partially deleted in new
chr17	7203551	7211833	chr17:7203551-7211833	0	-	7203551	7211699	8553170	6	42,125,60,54,66,176,	0,140,456,647,4622,8106,
#Partially deleted in new
chr17	7203691	7208342	chr17:7203691-7208342	0	-	7203691	7204037	8553170	4	125,60,54,169,	0,316,507,4482,
#Partially deleted in new
chr17	7203801	7207340	chr17:7203801-7207340	0	-	7203801	7206954	8553170	4	15,60,54,410,	0,206,397,3129,
#Deleted in new
chr17	7217124	7225266	chr17:7217124-7225266	1	+	7217145	7225097	0	21	49,103,76,66,73,65,135,145,130,126,199,105,87,63,102,98,73,73,73,76,310,	0,591,2997,3339,3479,3641,3799,4413,4827,5052,5542,6008,6519,6688,6843,7021,7196,7355,7517,7684,7832,
#Deleted in new
chr17	7219805	7225273	chr17:7219805-7225273	3	+	7219984	7225097	0	20	241,76,66,73,65,135,145,130,126,199,105,87,63,102,98,73,73,73,76,317,	0,316,658,798,960,1118,1732,2146,2371,2861,3327,3838,4007,4162,4340,4515,4674,4836,5003,5151,
#Deleted in new
chr17	7219843	7225265	chr17:7219843-7225265	0	+	7219984	7220104	789624	19	354,66,73,65,135,145,130,126,199,105,87,63,102,98,73,73,73,76,309,	0,620,760,922,1080,1694,2108,2333,2823,3289,3800,3969,4124,4302,4477,4636,4798,4965,5113,
#Deleted in new
chr17	7219859	7220922	chr17:7219859-7220922	0	+	7219859	7219859	8553170	4	187,76,213,157,	0,262,604,906,
#Deleted in new
chr17	7219859	7221988	chr17:7219859-7221988	0	+	7219984	7221988	789624	8	187,76,66,73,65,135,145,52,	0,262,604,744,906,1064,1678,2077,
#Deleted in new
chr17	7219862	7225264	chr17:7219862-7225264	1	+	7219984	7225097	0	19	184,76,73,65,135,145,130,126,199,105,87,63,102,98,73,73,73,76,308,	0,259,741,903,1061,1675,2089,2314,2804,3270,3781,3950,4105,4283,4458,4617,4779,4946,5094,
#Deleted in new
chr17	7219877	7220676	chr17:7219877-7220676	0	+	7219877	7219877	8553170	2	169,555,	0,244,
#Deleted in new
chr17	7219877	7222081	chr17:7219877-7222081	0	+	7219877	7219877	8553170	7	169,76,213,65,135,145,130,	0,244,586,888,1046,1660,2074,
#Deleted in new
chr17	7219894	7222079	chr17:7219894-7222079	0	+	7219894	7219894	8553170	5	152,76,65,145,128,	0,227,871,1643,2057,
#Deleted in new
chr17	7219894	7220780	chr17:7219894-7220780	0	+	7219894	7219894	8553170	3	152,76,317,	0,227,569,
#Deleted in new
chr17	7219894	7221136	chr17:7219894-7221136	0	+	7219894	7219894	8553170	5	152,76,66,73,371,	0,227,569,709,871,
#Deleted in new
chr17	7219902	7221021	chr17:7219902-7221021	0	+	7219984	7221021	789624	6	144,76,66,73,65,131,	0,219,561,701,863,988,
#Deleted in new
chr17	7219907	7222464	chr17:7219907-7222464	0	+	7219907	7219907	8553170	8	139,76,66,73,65,135,145,513,	0,214,556,696,858,1016,1630,2044,
#Deleted in new
chr17	7219925	7220739	chr17:7219925-7220739	0	+	7219925	7219925	8553170	2	272,276,	0,538,
#Deleted in new
chr17	7219937	7221998	chr17:7219937-7221998	0	+	7219937	7219937	8553170	7	109,76,66,73,65,135,47,	0,184,526,666,828,986,2014,
#Deleted in new
chr17	7219947	7221956	chr17:7219947-7221956	0	+	7219984	7221956	789624	6	99,76,63,114,145,5,	0,174,516,997,1590,2004,
#Deleted in new
chr17	7220191	7221655	chr17:7220191-7221655	0	+	7220191	7220191	8553170	4	485,65,135,118,	0,574,732,1346,
#Deleted in new
chr17	7220437	7221629	chr17:7220437-7221629	0	+	7220437	7220437	8553170	4	92,73,293,92,	0,166,328,1100,
#Deleted in new
chr17	7220757	7222092	chr17:7220757-7222092	0	+	7220757	7220757	8553170	4	73,135,145,141,	0,166,780,1194,
#Deleted in new
chr17	7220789	7222822	chr17:7220789-7222822	0	+	7220789	7221572	789624	6	41,135,164,130,126,156,	0,134,729,1162,1387,1877,
#Deleted in new
chr17	7221278	7222146	chr17:7221278-7222146	0	+	7221278	7221278	8553170	2	404,195,	0,673,
#Deleted in new
chr17	7221945	7223237	chr17:7221945-7223237	0	+	7221945	7221945	8553170	3	136,126,571,	0,231,721,
#Deleted in new
chr17	7222639	7223847	chr17:7222639-7223847	0	+	7222639	7222639	8553170	3	598,87,35,	0,1004,1173,
#Deleted in new
chr17	7222759	7225213	chr17:7222759-7225213	0	+	7222759	7224645	789624	10	106,105,87,63,102,73,73,73,76,257,	0,373,884,1053,1208,1561,1720,1882,2049,2197,
#Deleted in new
chr17	7222847	7224813	chr17:7222847-7224813	0	+	7222847	7222847	8553170	9	390,87,46,102,98,73,73,73,5,	0,796,965,1120,1298,1473,1632,1794,1961,
#Deleted in new
chr17	7223031	7225247	chr17:7223031-7225247	0	+	7223031	7223031	8553170	9	206,87,257,98,73,73,73,76,291,	0,612,781,1114,1289,1448,1610,1777,1925,
#Deleted in new
chr17	7223106	7223830	chr17:7223106-7223830	0	+	7223106	7223106	8553170	3	131,309,18,	0,315,706,
#Deleted in new
chr17	7223197	7225266	chr17:7223197-7225266	0	+	7223197	7225097	789624	9	40,87,63,102,98,73,73,170,310,	0,446,615,770,948,1123,1282,1517,1759,
#Deleted in new
chr17	7223218	7224976	chr17:7223218-7224976	0	+	7223218	7224976	789624	9	19,87,63,102,73,69,73,76,20,	0,425,594,749,1102,1265,1423,1590,1738,
#Deleted in new
chr17	7223296	7223379	chr17:7223296-7223379	3	-	7223296	7223296	5263520	1	83,	0,
#Deleted in new
chr17	7223504	7225236	chr17:7223504-7225236	0	+	7223504	7223504	8553170	1	1732,	0,
#Deleted in new
chr17	7223686	7225261	chr17:7223686-7225261	0	+	7223686	7223686	8553170	9	44,63,102,98,73,69,73,76,305,	0,126,281,459,634,797,955,1122,1270,
#Deleted in new
chr17	7223824	7224825	chr17:7223824-7224825	0	+	7223824	7223824	8553170	5	51,102,73,73,111,	0,143,496,655,890,
#Deleted in new
chr17	7223924	7224516	chr17:7223924-7224516	0	+	7223924	7223924	8553170	3	319,73,37,	0,396,555,
#Deleted in new
chr17	7224103	7224611	chr17:7224103-7224611	0	+	7224103	7224103	8553170	3	140,73,128,	0,217,380,
#Deleted in new
chr17	7224216	7225266	chr17:7224216-7225266	0	+	7224216	7224216	8553170	5	27,232,73,76,310,	0,104,425,592,740,
#Deleted in new
chr17	7224216	7225266	chr17:7224216-7225266	0	+	7224216	7224216	8553170	5	177,73,73,76,310,	0,263,425,592,740,
#Deleted in new
chr17	7224280	7224660	chr17:7224280-7224660	0	+	7224280	7224280	8553170	2	113,181,	0,199,
#Deleted in new
chr17	7224488	7225266	chr17:7224488-7225266	0	+	7224488	7224829	789624	4	64,53,76,310,	0,173,320,468,
#Deleted in new
chr17	7224632	7225266	chr17:7224632-7225266	0	+	7224632	7224632	8553170	2	252,310,	0,324,
#Partially deleted in new
chr17	7225340	7234545	chr17:7225340-7234545	3	-	7225864	7234262	0	15	973,219,180,132,129,68,77,140,70,91,136,110,146,70,477,	0,1080,1749,2063,2314,2636,3628,3794,4037,4247,4467,4705,4944,5387,8728,
#Partially deleted in new
chr17	7225454	7234318	chr17:7225454-7234318	1	-	7225864	7234262	789624	15	859,219,180,132,129,68,77,140,70,91,136,92,146,70,250,	0,966,1635,1949,2200,2522,3514,3680,3923,4133,4353,4591,4830,5273,8614,
#Partially deleted in new
chr17	7226136	7229035	chr17:7226136-7229035	0	-	7226136	7229035	789624	7	177,219,180,132,57,68,67,	0,284,953,1267,1518,1840,2832,
#Deleted in new
chr17	7226655	7228042	chr17:7226655-7228042	0	-	7226655	7226655	8553170	4	614,132,129,66,	0,748,999,1321,
#Deleted in new
chr17	7227148	7227827	chr17:7227148-7227827	0	-	7227148	7227148	8553170	2	387,173,	0,506,
#Deleted in new
chr17	7227237	7228384	chr17:7227237-7228384	0	-	7227237	7227237	8553170	4	32,132,129,408,	0,166,417,739,
#Partially deleted in new
chr17	7227862	7229267	chr17:7227862-7229267	0	-	7227862	7227862	8553170	3	182,77,133,	0,1106,1272,
#Partially deleted in new
chr17	7227976	7234308	chr17:7227976-7234308	0	-	7227976	7234262	789624	10	68,77,140,70,91,136,98,146,70,240,	0,992,1158,1401,1611,1831,2081,2308,2751,6092,
#Partially deleted in new
chr17	7228006	7234061	chr17:7228006-7234061	0	-	7228006	7233943	789624	10	38,77,140,70,91,136,98,146,70,126,	0,962,1128,1371,1581,1801,2051,2278,2721,5929,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	7228599	7229406	chr17:7228599-7229406	0	-	7228599	7228599	8553170	3	446,140,29,	0,535,778,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	7228761	7229391	chr17:7228761-7229391	0	-	7228761	7228761	8553170	2	284,257,	0,373,
#Deleted in new
chr17	7229152	7230391	chr17:7229152-7230391	0	-	7229152	7229152	8553170	6	122,98,91,136,110,107,	0,225,435,655,893,1132,
#Partially deleted in new
chr17	7229286	7234223	chr17:7229286-7234223	0	-	7229286	7229286	8553170	4	869,146,70,155,	0,998,1441,4782,
#Deleted in new
chr17	7229543	7230779	chr17:7229543-7230779	0	-	7229543	7229543	8553170	5	135,136,110,146,52,	0,264,502,741,1184,
#Partially deleted in new
chr17	7230122	7234517	chr17:7230122-7234517	0	-	7230122	7230122	8553170	3	33,513,449,	0,162,3946,
#Deleted in new
chr17	7235027	7239506	chr17:7235027-7239506	3	-	7235625	7239279	789624	5	813,838,93,32,261,	0,902,2357,2601,4218,
#Deleted in new
chr17	7235028	7239439	chr17:7235028-7239439	1	-	7235625	7239279	789624	5	812,637,93,32,194,	0,901,2356,2600,4217,
#Deleted in new
chr17	7235037	7239455	chr17:7235037-7239455	1	-	7235625	7236536	789624	4	803,838,93,210,	0,892,2347,4208,
#Deleted in new
chr17	7235286	7238930	chr17:7235286-7238930	1	-	7235625	7238807	789624	5	554,838,93,32,145,	0,643,2098,2342,3499,
#Deleted in new
chr17	7235625	7239279	chr17:7235625-7239279	1	-	7236087	7239279	789624	6	215,189,287,93,32,34,	0,304,855,1759,2003,3620,
#Deleted in new
chr17	7235933	7238258	chr17:7235933-7238258	0	-	7235933	7236536	789624	4	834,93,32,47,	0,1451,1695,2278,
#Deleted in new
chr17	7236289	7238882	chr17:7236289-7238882	0	-	7236289	7238807	789624	4	478,93,32,82,	0,1095,1339,2511,
#Deleted in new
chr17	7236358	7238715	chr17:7236358-7238715	0	-	7236358	7236536	789624	4	409,93,32,41,	0,1026,1270,2316,
#Deleted in new
chr17	7236380	7239722	chr17:7236380-7239722	0	-	7236380	7239631	789624	4	387,93,32,137,	0,1004,1248,3205,
#Deleted in new
chr17	7236428	7238171	chr17:7236428-7238171	0	-	7236428	7236536	789624	4	339,93,32,119,	0,956,1200,1624,
#Deleted in new
chr17	7236518	7238577	chr17:7236518-7238577	0	-	7236518	7236536	8553170	4	249,93,32,123,	0,866,1110,1936,
#Deleted in new
chr17	7236616	7237794	chr17:7236616-7237794	0	-	7236616	7236616	8553170	3	151,93,166,	0,768,1012,
#Deleted in new
chr17	7236636	7238171	chr17:7236636-7238171	0	-	7236636	7236636	8553170	4	126,93,32,119,	0,748,992,1416,
#Deleted in new
chr17	7240013	7242770	chr17:7240013-7242770	3	-	7240853	7242330	0	4	906,119,79,530,	0,1328,1587,2227,
#Deleted in new
chr17	7240407	7241819	chr17:7240407-7241819	1	-	7240853	7241359	789624	4	512,119,79,52,	0,934,1193,1360,
#Deleted in new
chr17	7240426	7244635	chr17:7240426-7244635	3	-	7241675	7244635	789624	4	493,119,79,85,	0,915,1174,4124,
#Deleted in new
chr17	7240573	7242358	chr17:7240573-7242358	0	-	7241439	7242330	789624	3	346,119,118,	0,768,1667,
#Deleted in new
chr17	7240627	7242156	chr17:7240627-7242156	1	-	7240853	7241359	789624	4	292,119,79,78,	0,714,973,1451,
#Deleted in new
chr17	7240853	7242252	chr17:7240853-7242252	1	-	7240853	7241359	789624	3	66,119,652,	0,488,747,
#Deleted in new
chr17	7241270	7242447	chr17:7241270-7242447	1	-	7241332	7242330	789624	3	190,79,207,	0,330,970,
#Deleted in new
chr17	7242199	7243814	chr17:7242199-7243814	3	+	7242199	7242199	8553170	1	1615,	0,
#Partially deleted in new
chr17	7243590	7247339	chr17:7243590-7247339	0	-	7243950	7247339	789624	8	361,57,85,112,117,72,119,63,	0,598,960,2435,2663,3200,3473,3686,
#Partially deleted in new
chr17	7243590	7251675	chr17:7243590-7251675	1	-	7244184	7251296	789624	8	655,85,112,117,72,119,67,481,	0,960,2435,2663,3200,3473,3686,7604,
#Partially deleted in new
chr17	7243617	7252081	chr17:7243617-7252081	3	-	7244184	7251296	789624	9	628,85,112,117,72,119,67,407,117,	0,933,2408,2636,3173,3446,3659,7577,8347,
#Partially deleted in new
chr17	7243649	7251682	chr17:7243649-7251682	0	-	7244184	7251296	789624	9	302,144,85,112,117,72,119,67,488,	0,452,901,2376,2604,3141,3414,3627,7545,
#Partially deleted in new
chr17	7243838	7251961	chr17:7243838-7251961	1	-	7244184	7251296	789624	9	407,85,112,117,72,119,67,407,163,	0,712,2187,2415,2952,3225,3438,7356,7960,
#Partially deleted in new
chr17	7244038	7252491	chr17:7244038-7252491	1	-	7244184	7246331	789624	8	207,85,112,117,72,119,67,78,	0,512,1987,2215,2752,3025,3238,8375,
#Deleted in new
chr17	7244140	7244838	chr17:7244140-7244838	0	-	7244140	7244140	8553170	2	105,288,	0,410,
#Partially deleted in new
chr17	7244231	7251286	chr17:7244231-7251286	0	-	7244231	7251286	789624	7	14,85,112,117,119,67,92,	0,319,1794,2022,2832,3045,6963,
#Partially deleted in new
chr17	7244554	7252054	chr17:7244554-7252054	0	-	7244554	7251296	789624	8	81,112,117,72,119,67,218,90,	0,1471,1699,2236,2509,2722,6640,7410,
#Deleted in new
chr17	7246033	7246678	chr17:7246033-7246678	0	-	7246033	7246033	8553170	2	104,425,	0,220,
#Partially deleted in new
chr17	7246253	7251330	chr17:7246253-7251330	0	-	7247142	7251296	789624	5	117,72,114,67,136,	0,537,810,1023,4941,
#Partially deleted in new
chr17	7246355	7252474	chr17:7246355-7252474	0	-	7246355	7251296	789624	6	15,72,119,67,407,61,	0,435,708,921,4839,6058,
#Partially deleted in new
chr17	7246828	7262089	chr17:7246828-7262089	3	-	7247314	7262043	789624	4	34,119,67,269,	0,235,448,14992,
#Partially deleted in new
chr17	7251415	7257028	chr17:7251415-7257028	0	+	7252502	7257028	789624	6	158,171,61,81,221,172,	0,1010,1354,1502,3167,5441,
#Partially deleted in new
chr17	7252023	7258639	chr17:7252023-7258639	0	+	7252502	7258639	789624	7	59,171,61,81,221,182,52,	0,402,746,894,2559,4833,6564,
#Partially deleted in new
chr17	7252052	7259931	chr17:7252052-7259931	3	+	7252502	7259685	789624	9	30,171,61,81,221,182,96,101,361,	0,373,717,865,2530,4804,6535,6773,7518,
#Partially deleted in new
chr17	7252055	7254913	chr17:7252055-7254913	1	+	7252502	7254886	789624	5	27,171,61,81,331,	0,370,714,862,2527,
#Partially deleted in new
chr17	7252200	7259931	chr17:7252200-7259931	1	+	7252502	7258788	789624	7	137,171,61,81,221,182,1344,	0,225,569,717,2382,4656,6387,
#Partially deleted in new
chr17	7252231	7259940	chr17:7252231-7259940	1	+	7252502	7259685	789624	9	106,171,61,81,221,182,96,101,370,	0,194,538,686,2351,4625,6356,6594,7339,
#Partially deleted in new
chr17	7252236	7254633	chr17:7252236-7254633	0	+	7252502	7254633	789624	5	109,171,61,81,51,	0,189,533,681,2346,
#Partially deleted in new
chr17	7252285	7259940	chr17:7252285-7259940	1	+	7252502	7259685	789624	8	311,61,81,221,182,96,101,370,	0,484,632,2297,4571,6302,6540,7285,
#Partially deleted in new
chr17	7252285	7259940	chr17:7252285-7259940	1	+	7252502	7258788	789624	6	311,61,81,221,182,1353,	0,484,632,2297,4571,6302,
#Partially deleted in new
chr17	7252375	7254906	chr17:7252375-7254906	1	+	7252502	7254886	789624	4	221,61,81,324,	0,394,542,2207,
#Partially deleted in new
chr17	7252524	7259940	chr17:7252524-7259940	0	+	7252524	7259594	789624	7	72,61,81,221,182,96,370,	0,245,393,2058,4332,6063,7046,
#Partially deleted in new
chr17	7252554	7259079	chr17:7252554-7259079	0	+	7252554	7258930	789624	7	42,61,81,221,182,96,254,	0,215,363,2028,4302,6033,6271,
#Partially deleted in new
chr17	7252622	7254803	chr17:7252622-7254803	0	+	7254673	7254803	789624	3	208,81,221,	0,295,1960,
#Partially deleted in new
chr17	7252768	7258968	chr17:7252768-7258968	0	+	7252768	7256883	789624	5	62,81,184,182,381,	0,149,1814,4088,5819,
#Partially deleted in new
chr17	7254582	7258782	chr17:7254582-7258782	0	+	7254582	7258691	789624	2	221,195,	0,4005,
#Deleted in new
chr17	7259902	7262478	chr17:7259902-7262478	1	-	7260373	7262043	789624	4	634,85,165,658,	0,739,918,1918,
#Deleted in new
chr17	7259903	7262945	chr17:7259903-7262945	1	-	7260486	7262043	789624	3	633,165,1125,	0,917,1917,
#Deleted in new
chr17	7260136	7263213	chr17:7260136-7263213	3	-	7260373	7262043	789624	5	400,85,165,523,55,	0,505,684,1684,3022,
#Deleted in new
chr17	7260461	7261145	chr17:7260461-7261145	0	-	7260461	7260959	789624	3	75,85,325,	0,180,359,
#Deleted in new
chr17	7260488	7263200	chr17:7260488-7263200	0	-	7260488	7263176	789624	5	48,85,165,265,42,	0,153,332,1332,2670,
#Deleted in new
chr17	7260653	7262343	chr17:7260653-7262343	1	-	7260665	7262043	789624	3	73,165,497,	0,167,1193,
#Partially deleted in new
chr17	7260820	7263983	chr17:7260820-7263983	0	-	7260820	7262043	789624	3	165,523,55,	0,1000,3108,
#Deleted in new
chr17	7262066	7263204	chr17:7262066-7263204	0	-	7262066	7262066	8553170	2	277,594,	0,544,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	7266054	7266166	chr17:7266054-7266166	3	-	7266054	7266054	8553170	1	112,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	7281666	7288257	chr17:7281666-7288257	3	+	7281934	7286629	789624	11	301,117,173,125,116,163,188,105,102,204,1832,	0,1578,1806,2071,2307,2550,2818,3168,3421,4038,4759,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	7281734	7287833	chr17:7281734-7287833	0	+	7281934	7285769	789624	11	233,117,173,125,116,163,188,166,102,204,1408,	0,1510,1738,2003,2239,2482,2750,3100,3353,3970,4691,
#Deleted in new
chr17	7281735	7286151	chr17:7281735-7286151	1	+	7281934	7285968	789624	10	232,117,173,125,116,163,188,105,102,447,	0,1509,1737,2002,2238,2481,2749,3099,3352,3969,
#Deleted in new
chr17	7281807	7286901	chr17:7281807-7286901	0	+	7281934	7284533	789624	10	160,117,173,125,163,188,105,102,204,476,	0,1437,1665,1930,2409,2677,3027,3280,3897,4618,
#Deleted in new
chr17	7282129	7286167	chr17:7282129-7286167	1	+	7282426	7285968	789624	10	300,117,173,125,116,163,188,105,102,463,	0,1115,1343,1608,1844,2087,2355,2705,2958,3575,
#Deleted in new
chr17	7282946	7284071	chr17:7282946-7284071	3	-	7282946	7282946	8553170	2	370,45,	0,1080,
#Partially deleted in new
chr17	7288251	7294564	chr17:7288251-7294564	3	-	7288787	7294500	789624	9	392,90,196,104,285,90,34,64,335,	0,497,1278,1716,1999,2841,3774,5223,5978,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	7288262	7294589	chr17:7288262-7294589	0	-	7288262	7288262	8553170	6	381,90,196,104,285,3497,	0,486,1267,1705,1988,2830,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	7288262	7293935	chr17:7288262-7293935	0	-	7288262	7288262	8553170	8	381,90,196,104,285,967,64,108,	0,486,1267,1705,1988,2830,5212,5565,
#Partially deleted in new
chr17	7288368	7290392	chr17:7288368-7290392	0	-	7288787	7290392	789624	5	108,90,196,104,142,	0,380,1161,1599,1882,
#Deleted in new
chr17	7289536	7290563	chr17:7289536-7290563	0	-	7289536	7289536	8553170	3	189,104,313,	0,431,714,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	7290366	7294615	chr17:7290366-7294615	0	-	7290366	7290366	8553170	6	169,90,248,34,64,48,	0,726,1165,1659,3108,4201,
#Deleted in new
chr17	7293074	7294556	chr17:7293074-7294556	0	-	7293074	7293074	8553170	2	464,327,	0,1155,
#Deleted in new
chr17	7306998	7312463	chr17:7306998-7312463	1	+	7307046	7311640	0	6	117,186,105,132,74,642,	0,2616,4019,4351,4579,4823,
#Deleted in new
chr17	7307325	7310453	chr17:7307325-7310453	0	+	7307325	7307325	8553170	2	84,839,	0,2289,
#Deleted in new
chr17	7307372	7312455	chr17:7307372-7312455	3	+	7309635	7311640	0	6	380,186,105,132,74,634,	0,2242,3645,3977,4205,4449,
#Deleted in new
chr17	7307539	7312455	chr17:7307539-7312455	1	+	7309635	7311640	0	7	213,95,186,105,132,74,634,	0,941,2075,3478,3810,4038,4282,
#Deleted in new
chr17	7307581	7311868	chr17:7307581-7311868	1	+	7309635	7311640	789624	5	171,186,105,302,47,	0,2033,3436,3768,4240,
#Deleted in new
chr17	7307601	7312244	chr17:7307601-7312244	1	+	7309635	7311640	0	6	151,204,105,132,74,423,	0,1995,3416,3748,3976,4220,
#Deleted in new
chr17	7307630	7310101	chr17:7307630-7310101	0	+	7307630	7307630	8553170	2	122,487,	0,1984,
#Deleted in new
chr17	7307973	7312455	chr17:7307973-7312455	1	+	7309635	7311640	0	6	140,186,105,132,74,634,	0,1641,3044,3376,3604,3848,
#Deleted in new
chr17	7307973	7312455	chr17:7307973-7312455	1	+	7309635	7311640	0	7	140,95,186,105,132,74,634,	0,507,1641,3044,3376,3604,3848,
#Deleted in new
chr17	7307992	7311615	chr17:7307992-7311615	0	+	7309635	7311615	789624	5	141,186,105,132,38,	0,1622,3025,3357,3585,
#Deleted in new
chr17	7308370	7312455	chr17:7308370-7312455	1	+	7309635	7311640	0	6	205,186,105,132,74,634,	0,1244,2647,2979,3207,3451,
#Deleted in new
chr17	7311323	7315123	chr17:7311323-7315123	0	-	7311578	7315123	789624	10	267,96,80,90,154,83,80,113,110,165,	0,1705,1888,2056,2244,2582,2756,2967,3164,3635,
#Deleted in new
chr17	7312658	7315328	chr17:7312658-7315328	0	-	7312658	7312658	8553170	10	181,96,80,90,154,83,80,113,632,77,	0,370,553,721,909,1247,1421,1632,1829,2593,
#Deleted in new
chr17	7312658	7315321	chr17:7312658-7315321	0	-	7312658	7312658	8553170	9	181,96,80,90,421,80,113,110,363,	0,370,553,721,909,1421,1632,1829,2300,
#Deleted in new
chr17	7312658	7313757	chr17:7312658-7313757	0	-	7312658	7312658	8553170	3	181,96,546,	0,370,553,
#Deleted in new
chr17	7312659	7315343	chr17:7312659-7315343	1	-	7312755	7315052	0	10	180,96,80,90,154,83,80,113,110,385,	0,369,552,720,908,1246,1420,1631,1828,2299,
#Deleted in new
chr17	7312659	7313721	chr17:7312659-7313721	0	-	7312755	7313721	789624	5	180,69,80,90,154,	0,369,552,720,908,
#Partially deleted in new
chr17	7312660	7319075	chr17:7312660-7319075	0	-	7315538	7319075	789624	19	179,96,80,90,154,83,80,113,110,161,325,52,166,113,145,108,88,180,26,	0,368,551,719,907,1245,1419,1630,1827,2298,2670,3615,4544,4800,5127,5404,5608,5834,6389,
#Deleted in new
chr17	7312660	7313270	chr17:7312660-7313270	0	-	7312962	7313270	789624	2	464,59,	0,551,
#Partially deleted in new
chr17	7312660	7319174	chr17:7312660-7319174	3	-	7315538	7319174	789624	19	179,96,80,90,154,83,80,113,110,161,448,52,166,113,145,108,88,180,125,	0,368,551,719,907,1245,1419,1630,1827,2298,2670,3615,4544,4800,5127,5404,5608,5834,6389,
#Deleted in new
chr17	7312661	7315564	chr17:7312661-7315564	3	-	7312755	7315052	0	11	178,96,80,90,154,83,80,113,110,161,234,	0,367,550,718,906,1244,1418,1629,1826,2297,2669,
#Deleted in new
chr17	7312695	7315564	chr17:7312695-7315564	0	-	7312695	7312695	8553170	8	144,263,90,421,80,113,632,234,	0,333,684,872,1384,1595,1792,2635,
#Deleted in new
chr17	7313237	7315322	chr17:7313237-7315322	0	-	7313237	7315052	789624	9	54,90,154,83,80,113,110,161,71,	0,142,330,668,842,1053,1250,1721,2014,
#Deleted in new
chr17	7313379	7315407	chr17:7313379-7315407	0	-	7313379	7313379	8553170	6	90,592,113,110,161,77,	0,188,911,1108,1579,1951,
#Deleted in new
chr17	7313574	7315497	chr17:7313574-7315497	0	-	7313574	7313574	8553170	6	414,80,113,110,161,167,	0,505,716,913,1384,1756,
#Deleted in new
chr17	7313665	7315293	chr17:7313665-7315293	0	-	7313665	7313665	8553170	6	323,80,113,110,161,42,	0,414,625,822,1293,1586,
#Deleted in new
chr17	7313669	7315120	chr17:7313669-7315120	0	-	7313669	7313669	8553170	4	52,80,113,633,	0,410,621,818,
#Deleted in new
chr17	7314040	7314818	chr17:7314040-7314818	0	-	7314040	7314040	8553170	3	119,113,331,	0,250,447,
#Deleted in new
chr17	7314142	7315348	chr17:7314142-7315348	0	-	7314142	7314142	8553170	4	261,110,161,18,	0,345,816,1188,
#Partially deleted in new
chr17	7315627	7329316	chr17:7315627-7329316	1	-	7316122	7329312	0	29	700,166,113,145,108,88,180,159,165,162,99,228,146,132,170,79,77,199,163,86,182,265,73,89,112,299,66,445,286,	0,1577,1833,2160,2437,2641,2867,3422,5131,5484,5733,5932,6237,7107,7326,7857,8019,8186,8480,8767,9171,9581,10013,10627,10809,11083,11537,11812,13403,
#Partially deleted in new
chr17	7315627	7329328	chr17:7315627-7329328	3	-	7316122	7329312	0	29	700,166,113,145,108,88,180,159,165,162,99,228,146,132,176,79,77,199,163,86,182,265,73,89,112,299,66,445,298,	0,1577,1833,2160,2437,2641,2867,3422,5131,5484,5733,5932,6237,7107,7320,7857,8019,8186,8480,8767,9171,9581,10013,10627,10809,11083,11537,11812,13403,
#Partially deleted in new
chr17	7315632	7327500	chr17:7315632-7327500	0	-	7318556	7327500	789624	28	695,166,113,145,108,88,197,159,165,162,99,228,146,132,176,79,77,199,163,86,182,265,73,89,112,200,66,61,	0,1572,1828,2155,2432,2636,2862,3417,5126,5479,5728,5927,6232,7102,7315,7852,8014,8181,8475,8762,9166,9576,10008,10622,10804,11078,11532,11807,
#Partially deleted in new
chr17	7315930	7329393	chr17:7315930-7329393	1	-	7316122	7329312	789624	28	397,166,113,145,108,88,180,159,165,162,99,228,146,132,170,79,77,199,163,86,182,265,73,89,112,299,445,363,	0,1274,1530,1857,2134,2338,2564,3119,4828,5181,5430,5629,5934,6804,7023,7554,7716,7883,8177,8464,8868,9278,9710,10324,10506,10780,11509,13100,
#Partially deleted in new
chr17	7316122	7317908	chr17:7316122-7317908	0	-	7316122	7316122	8553170	3	205,166,448,	0,1082,1338,
#Deleted in new
chr17	7317206	7318613	chr17:7317206-7318613	0	-	7317206	7317206	8553170	5	164,113,145,292,119,	0,254,581,858,1288,
#Deleted in new
chr17	7317246	7318741	chr17:7317246-7318741	0	-	7317246	7317246	8553170	6	124,224,145,108,88,247,	0,214,541,818,1022,1248,
#Partially deleted in new
chr17	7317285	7329266	chr17:7317285-7329266	0	-	7317285	7329266	789624	27	85,113,145,108,88,180,159,165,162,99,228,146,132,176,79,77,199,163,86,182,265,73,89,112,299,445,236,	0,175,502,779,983,1209,1764,3473,3826,4075,4274,4579,5449,5662,6199,6361,6528,6822,7109,7513,7923,8355,8969,9151,9425,10154,11745,
#Partially deleted in new
chr17	7318268	7320809	chr17:7318268-7320809	0	-	7318268	7318268	8553170	3	406,159,51,	0,781,2490,
#Partially deleted in new
chr17	7321422	7322964	chr17:7321422-7322964	0	-	7321422	7321422	8553170	4	37,451,132,17,	0,137,1312,1525,
#Partially deleted in new
chr17	7321729	7326839	chr17:7321729-7326839	0	-	7324468	7326839	789624	15	58,146,132,176,79,77,199,159,86,70,265,73,89,112,129,	0,135,1005,1218,1755,1917,2084,2378,2665,3181,3479,3911,4525,4707,4981,
#Deleted in new
chr17	7323073	7324370	chr17:7323073-7324370	0	-	7323073	7323073	8553170	5	50,79,77,199,263,	0,411,573,740,1034,
#Deleted in new
chr17	7325162	7326837	chr17:7325162-7326837	0	-	7325162	7325162	8553170	5	311,73,89,112,127,	0,478,1092,1274,1548,
#Deleted in new
chr17	7325430	7326524	chr17:7325430-7326524	0	-	7325430	7325430	8553170	3	283,89,88,	0,824,1006,
#Partially deleted in new
chr17	7330451	7335413	chr17:7330451-7335413	7	+	7330451	7330451	16724991	7	503,105,72,89,258,161,105,	0,1480,1727,2025,3179,4190,4857,
#Partially deleted in new
chr17	7336528	7351478	chr17:7336528-7351478	3	+	7336734	7351395	0	22	259,58,120,54,59,184,45,96,75,110,52,101,124,212,70,95,170,173,110,111,50,184,	0,783,5419,5746,5887,6850,7177,7332,7520,8010,9715,9862,10279,10502,11393,11598,11777,12466,13416,13598,14421,14766,
#Partially deleted in new
chr17	7336579	7343953	chr17:7336579-7343953	0	+	7342058	7343953	789624	8	208,107,120,54,59,184,45,93,	0,683,5368,5695,5836,6799,7126,7281,
#Partially deleted in new
chr17	7336589	7343561	chr17:7336589-7343561	0	+	7342058	7343561	789624	5	198,120,54,59,183,	0,5358,5685,5826,6789,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	7336596	7342753	chr17:7336596-7342753	0	+	7336596	7336596	8553170	5	191,58,120,54,338,	0,715,5351,5678,5819,
#Partially deleted in new
chr17	7342194	7344123	chr17:7342194-7344123	0	+	7342194	7342194	8553170	6	134,59,184,45,96,75,	0,221,1184,1511,1666,1854,
#Partially deleted in new
chr17	7342934	7344647	chr17:7342934-7344647	0	+	7342934	7342934	8553170	5	628,45,96,75,109,	0,771,926,1114,1604,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	7345330	7350228	chr17:7345330-7350228	0	+	7345330	7345330	8553170	1	4898,	0,
#Deleted in new
chr17	7347128	7348252	chr17:7347128-7348252	0	+	7347128	7347128	8553170	3	114,70,126,	0,793,998,
#Partially deleted in new
chr17	7350316	7351476	chr17:7350316-7351476	0	+	7350316	7350316	8553170	3	88,50,182,	0,633,978,
#Partially deleted in new
chr17	7350389	7351477	chr17:7350389-7351477	0	+	7350389	7350389	8553170	3	41,50,183,	0,560,905,
#Partially deleted in new
chr17	7350420	7351477	chr17:7350420-7351477	0	+	7350420	7350420	8553170	3	179,50,183,	0,529,874,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	7350864	7351476	chr17:7350864-7351476	0	+	7350864	7350864	8553170	2	135,182,	0,430,
#Deleted in new
chr17	7351888	7354939	chr17:7351888-7354939	3	+	7352942	7353641	789624	1	3051,	0,
#Deleted in new
chr17	7352161	7354944	chr17:7352161-7354944	1	+	7352825	7353641	789624	1	2783,	0,
#Deleted in new
chr17	7352686	7354944	chr17:7352686-7354944	3	-	7352686	7352686	8553170	2	146,275,	0,1983,
#Deleted in new
chr17	7355122	7357218	chr17:7355122-7357218	1	+	7355204	7356721	789624	7	251,57,81,21,81,80,620,	0,463,715,906,1073,1277,1476,
#Deleted in new
chr17	7355177	7357219	chr17:7355177-7357219	3	+	7355204	7356632	789624	7	196,57,81,21,105,88,621,	0,408,660,851,994,1214,1421,
#Deleted in new
chr17	7355177	7356696	chr17:7355177-7356696	1	+	7355204	7356632	789624	7	196,57,81,21,81,88,98,	0,408,660,851,1018,1214,1421,
#Partially deleted in new
chr17	7380533	7389774	chr17:7380533-7389774	3	+	7382926	7389084	789624	14	214,141,254,71,192,156,284,271,95,165,80,299,96,804,	0,440,2302,2716,2891,3175,3436,3950,6027,6456,6844,7872,8254,8437,
#Partially deleted in new
chr17	7380836	7389737	chr17:7380836-7389737	1	+	7382926	7389084	789624	13	278,254,71,192,156,284,271,95,180,80,299,96,767,	0,1999,2413,2588,2872,3133,3647,5724,6138,6541,7569,7951,8134,
#Partially deleted in new
chr17	7381045	7383728	chr17:7381045-7383728	0	+	7381045	7381045	8553170	2	69,893,	0,1790,
#Partially deleted in new
chr17	7381088	7383468	chr17:7381088-7383468	0	+	7381088	7381088	8553170	3	26,485,44,	0,1747,2336,
#Partially deleted in new
chr17	7381090	7383718	chr17:7381090-7383718	0	+	7382926	7383298	789624	5	24,254,93,192,10,	0,1745,2137,2334,2618,
#Partially deleted in new
chr17	7384246	7386622	chr17:7384246-7386622	0	+	7384246	7384257	8553170	3	130,271,62,	0,237,2314,
#Partially deleted in new
chr17	7384265	7386655	chr17:7384265-7386655	0	+	7384265	7384265	8553170	2	489,95,	0,2295,
#Partially deleted in new
chr17	7387133	7388699	chr17:7387133-7388699	0	+	7387133	7388699	789624	3	21,80,152,	0,244,1414,
#Partially deleted in new
chr17	7389726	7394570	chr17:7389726-7394570	1	-	7390384	7394110	789624	8	715,162,162,221,43,236,56,94,	0,907,3064,3417,3740,3874,4377,4750,
#Partially deleted in new
chr17	7389726	7394842	chr17:7389726-7394842	2	-	7392791	7394110	789624	7	715,162,162,43,236,56,366,	0,907,3064,3740,3874,4377,4750,
#Partially deleted in new
chr17	7389729	7394843	chr17:7389729-7394843	1	-	7390384	7394110	789624	8	712,162,162,221,43,236,164,367,	0,904,3061,3414,3737,3871,4374,4747,
#Partially deleted in new
chr17	7389729	7394508	chr17:7389729-7394508	0	-	7389729	7389729	8553170	5	712,162,162,366,908,	0,904,3061,3414,3871,
#Partially deleted in new
chr17	7389729	7394565	chr17:7389729-7394565	0	-	7389729	7389729	8553170	7	712,162,162,221,43,667,89,	0,904,3061,3414,3737,3871,4747,
#Partially deleted in new
chr17	7389729	7394843	chr17:7389729-7394843	1	-	7390791	7394110	789624	9	712,162,162,206,14,43,236,164,367,	0,904,3061,3414,3621,3737,3871,4374,4747,
#Partially deleted in new
chr17	7389732	7394807	chr17:7389732-7394807	1	-	7390384	7394110	789624	8	709,162,162,221,43,236,168,331,	0,901,3058,3411,3734,3868,4371,4744,
#Partially deleted in new
chr17	7389732	7394535	chr17:7389732-7394535	1	-	7390384	7394110	789624	7	709,162,162,221,43,236,432,	0,901,3058,3411,3734,3868,4371,
#Partially deleted in new
chr17	7389733	7404097	chr17:7389733-7404097	3	-	7395081	7404084	789624	11	708,162,162,221,43,236,631,183,81,32,98,	0,900,3057,3410,3733,3867,4370,5174,13576,13924,14266,
#Partially deleted in new
chr17	7389734	7394515	chr17:7389734-7394515	0	-	7389734	7389734	8553170	6	707,162,162,43,559,39,	0,899,3056,3732,3866,4742,
#Partially deleted in new
chr17	7389753	7394268	chr17:7389753-7394268	1	-	7390384	7394110	789624	7	688,162,90,221,43,236,165,	0,880,3037,3390,3713,3847,4350,
#Partially deleted in new
chr17	7390049	7393482	chr17:7390049-7393482	0	-	7390384	7393482	789624	5	392,60,162,221,16,	0,584,2741,3094,3417,
#Partially deleted in new
chr17	7390216	7404097	chr17:7390216-7404097	0	-	7395081	7404084	789624	10	225,162,162,221,43,236,164,183,32,98,	0,417,2574,2927,3250,3384,3887,4691,13441,13783,
#Partially deleted in new
chr17	7390447	7394274	chr17:7390447-7394274	0	-	7390447	7392952	789624	4	348,162,43,171,	0,2343,3019,3656,
#Partially deleted in new
chr17	7390710	7403387	chr17:7390710-7403387	0	-	7395081	7403387	789624	7	85,162,43,236,164,183,78,	0,2080,2756,2890,3393,4197,12599,
#Deleted in new
chr17	7392845	7394524	chr17:7392845-7394524	0	-	7392845	7392952	789624	5	107,221,43,164,48,	0,298,621,1258,1631,
#Deleted in new
chr17	7392883	7394545	chr17:7392883-7394545	0	-	7392883	7394110	789624	5	69,43,236,164,69,	0,583,717,1220,1593,
#Partially deleted in new
chr17	7394103	7404097	chr17:7394103-7404097	0	-	7395081	7404084	789624	5	168,183,81,32,98,	0,804,9206,9554,9896,
#Deleted in new
chr17	7402974	7404137	chr17:7402974-7404137	3	-	7403065	7404084	789624	4	235,81,32,138,	0,335,683,1025,
#Deleted in new
chr17	7402977	7403480	chr17:7402977-7403480	0	-	7402977	7402977	8553170	2	232,171,	0,332,
#Deleted in new
chr17	7402982	7404039	chr17:7402982-7404039	0	-	7403648	7404039	789624	3	408,63,40,	0,644,1017,
#Deleted in new
chr17	7404873	7418684	chr17:7404873-7418684	3	+	7408255	7417799	0	8	737,701,51,150,186,193,597,1759,	0,3138,7283,9470,9789,10082,10637,12052,
#Deleted in new
chr17	7405355	7408509	chr17:7405355-7408509	0	+	7405355	7405355	8553170	2	255,50,	0,3104,
#Deleted in new
chr17	7408182	7419860	chr17:7408182-7419860	1	+	7408255	7417799	0	7	530,51,150,186,193,597,2935,	0,3974,6161,6480,6773,7328,8743,
#Deleted in new
chr17	7408640	7415128	chr17:7408640-7415128	0	+	7408640	7415128	789624	4	72,150,186,173,	0,5703,6022,6315,
#Partially deleted in new
chr17	7420102	7444081	chr17:7420102-7444081	3	+	7420102	7420102	8553170	6	57,61,154,111,104,1488,	0,524,1345,21368,21673,22491,
#Deleted in new
chr17	7420359	7421632	chr17:7420359-7421632	3	+	7420384	7421605	789624	3	169,61,752,	0,267,521,
#Deleted in new
chr17	7425614	7427568	chr17:7425614-7427568	3	+	7425688	7427497	789624	3	212,58,1381,	0,378,573,
#Deleted in new
chr17	7425640	7427568	chr17:7425640-7427568	1	+	7425688	7426707	789624	3	186,58,1043,	0,352,885,
#Deleted in new
chr17	7428862	7432762	chr17:7428862-7432762	3	+	7428902	7432762	789624	3	178,58,3395,	0,327,505,
#Deleted in new
chr17	7435442	7437679	chr17:7435442-7437679	3	+	7435871	7437506	789624	3	254,233,1486,	0,410,751,
#Deleted in new
chr17	7435453	7437523	chr17:7435453-7437523	1	+	7435871	7437506	789624	2	632,1330,	0,740,
#Deleted in new
chr17	7436556	7437523	chr17:7436556-7437523	3	-	7436556	7436556	8553170	2	78,249,	0,718,
#Partially deleted in new
chr17	7438272	7443331	chr17:7438272-7443331	1	+	7441843	7443146	789624	5	258,111,104,199,256,	0,3198,3503,4321,4803,
#Partially deleted in new
chr17	7439026	7444937	chr17:7439026-7444937	3	+	7439620	7443146	789624	5	787,111,104,199,1862,	0,2444,2749,3567,4049,
#Partially deleted in new
chr17	7439158	7443327	chr17:7439158-7443327	3	-	7439158	7439158	8553170	2	261,69,	0,4100,
#Partially deleted in new
chr17	7439505	7445966	chr17:7439505-7445966	3	+	7439505	7439505	8553170	3	2076,104,3373,	0,2270,3088,
#Partially deleted in new
chr17	7439879	7443428	chr17:7439879-7443428	1	+	7441843	7443146	789624	4	1702,104,199,353,	0,1896,2714,3196,
#Partially deleted in new
chr17	7440741	7443556	chr17:7440741-7443556	1	+	7441843	7443146	789624	5	75,131,104,199,481,	0,709,1034,1852,2334,
#Partially deleted in new
chr17	7440742	7444902	chr17:7440742-7444902	1	+	7441843	7443146	789624	5	74,111,104,199,1827,	0,728,1033,1851,2333,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	7440772	7442532	chr17:7440772-7442532	0	+	7440772	7440772	8553170	3	44,111,757,	0,698,1003,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	7445060	7457707	chr17:7445060-7457707	3	+	7445127	7456723	789624	11	125,140,45,110,109,148,210,224,173,148,1125,	0,209,1008,1772,1982,2442,3518,9236,10223,10733,11522,
#Deleted in new
chr17	7445063	7447089	chr17:7445063-7447089	0	+	7445127	7447089	789624	6	122,140,45,75,110,47,	0,206,1005,1334,1769,1979,
#Deleted in new
chr17	7445107	7445774	chr17:7445107-7445774	0	+	7445107	7445107	8553170	2	78,505,	0,162,
#Partially deleted in new
chr17	7445338	7455860	chr17:7445338-7455860	0	+	7445338	7455860	789624	8	71,45,110,109,148,224,173,67,	0,730,1494,1704,2164,8958,9945,10455,
#Partially deleted in new
chr17	7445502	7456926	chr17:7445502-7456926	1	+	7446086	7456723	789624	10	112,45,110,109,148,210,224,173,148,344,	0,566,1330,1540,2000,3076,8794,9781,10291,11080,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	7445530	7457315	chr17:7445530-7457315	1	+	7446086	7456723	789624	10	84,45,110,109,148,210,77,173,148,733,	0,538,1302,1512,1972,3048,8913,9753,10263,11052,
#Partially deleted in new
chr17	7445542	7455689	chr17:7445542-7455689	0	+	7445542	7445542	8553170	6	72,874,608,210,224,406,	0,526,1500,3036,8754,9741,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	7455593	7457329	chr17:7455593-7457329	1	+	7456609	7456723	789624	2	348,747,	0,989,
#Partially deleted in new
chr17	7459365	7484263	chr17:7459365-7484263	3	-	7461939	7466801	789624	4	4525,1100,71,260,	0,6345,7891,24638,
#Partially deleted in new
chr17	7459365	7479625	chr17:7459365-7479625	1	-	7461939	7466801	789624	4	4525,1100,71,170,	0,6345,7891,20090,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	7481331	7483496	chr17:7481331-7483496	3	+	7481516	7483001	789624	2	188,1509,	0,656,
#Partially deleted in new
chr17	7484365	7514616	chr17:7484365-7514616	0	+	7484365	7484365	8553170	29	492,133,137,174,282,162,221,133,125,211,210,169,95,204,223,184,172,106,206,225,247,101,105,183,204,187,114,150,1596,	0,11575,11844,12074,12398,12990,13284,13712,14673,14915,16273,16574,16923,17160,17534,18152,18755,19019,19220,23885,24578,25166,26849,27040,27445,27792,28111,28408,28655,
#Partially deleted in new
chr17	7484619	7499758	chr17:7484619-7499758	3	+	7484764	7499521	789624	10	238,133,137,174,282,162,221,133,125,478,	0,11321,11590,11820,12144,12736,13030,13458,14419,14661,
#Deleted in new
chr17	7497780	7498519	chr17:7497780-7498519	0	+	7497780	7497780	8553170	2	90,442,	0,297,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	7498825	7500791	chr17:7498825-7500791	0	+	7498825	7498825	8553170	3	338,211,153,	0,455,1813,
#Deleted in new
chr17	7502084	7502724	chr17:7502084-7502724	0	+	7502084	7502084	8553170	2	38,207,	0,433,
#Deleted in new
chr17	7502920	7503655	chr17:7502920-7503655	0	+	7502920	7502920	8553170	3	372,106,70,	0,464,665,
#Deleted in new
chr17	7503400	7503956	chr17:7503400-7503956	0	+	7503400	7503400	8553170	2	90,371,	0,185,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	7508470	7509927	chr17:7508470-7509927	0	+	7508470	7508470	8553170	3	5,247,396,	0,473,1061,
#Deleted in new
chr17	7511514	7512481	chr17:7511514-7512481	0	+	7511514	7511514	8553170	3	74,204,324,	0,296,643,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	7537095	7537196	chr17:7537095-7537196	3	-	7537095	7537095	8553170	1	101,	0,
#Partially deleted in new
chr17	7548890	7557890	chr17:7548890-7557890	3	+	7549153	7557350	0	7	422,48,76,54,36,125,792,	0,583,1229,1908,2052,7887,8208,
#Partially deleted in new
chr17	7549057	7557890	chr17:7549057-7557890	0	+	7549153	7553618	789624	8	255,48,76,54,36,239,125,792,	0,416,1062,1741,1885,4529,7720,8041,
#Partially deleted in new
chr17	7549098	7561601	chr17:7549098-7561601	3	+	7549153	7560833	789624	11	214,48,76,54,36,125,79,48,119,139,878,	0,375,1021,1700,1844,7679,10525,10747,10950,11251,11625,
#Partially deleted in new
chr17	7549424	7557232	chr17:7549424-7557232	0	+	7549424	7549424	8553170	6	97,76,54,36,125,134,	0,695,1374,1518,7353,7674,
#Partially deleted in new
chr17	7549777	7557574	chr17:7549777-7557574	0	+	7549777	7549777	8553170	6	38,76,54,36,125,476,	0,342,1021,1165,7000,7321,
#Deleted in new
chr17	7557819	7558245	chr17:7557819-7558245	3	-	7557819	7557819	8553170	1	426,	0,
#Deleted in new
chr17	7558291	7561608	chr17:7558291-7561608	1	+	7559039	7560833	789624	5	1006,46,119,139,885,	0,1556,1757,2058,2432,
#Deleted in new
chr17	7558291	7561292	chr17:7558291-7561292	1	+	7560071	7560833	789624	5	84,48,119,139,569,	0,1554,1757,2058,2432,
#Deleted in new
chr17	7558292	7560835	chr17:7558292-7560835	1	+	7559090	7560833	0	6	83,230,43,119,139,112,	0,775,1558,1756,2057,2431,
#Deleted in new
chr17	7558299	7560394	chr17:7558299-7560394	0	+	7559090	7560394	789624	5	76,230,79,119,45,	0,768,1324,1749,2050,
#Deleted in new
chr17	7558301	7560372	chr17:7558301-7560372	0	+	7559090	7560372	789624	6	74,230,79,48,119,23,	0,766,1322,1544,1747,2048,
#Deleted in new
chr17	7558475	7561600	chr17:7558475-7561600	1	+	7559039	7560833	0	5	822,79,119,139,877,	0,1148,1573,1874,2248,
#Deleted in new
chr17	7558596	7561608	chr17:7558596-7561608	3	+	7559039	7560833	0	6	701,79,48,119,139,885,	0,1027,1249,1452,1753,2127,
#Deleted in new
chr17	7558758	7560838	chr17:7558758-7560838	1	+	7559039	7560833	0	5	539,43,119,139,115,	0,1092,1290,1591,1965,
#Deleted in new
chr17	7558786	7561601	chr17:7558786-7561601	1	+	7559039	7561005	0	7	511,79,48,119,139,94,603,	0,837,1059,1262,1563,1937,2212,
#Partially deleted in new
chr17	7561874	7571969	chr17:7561874-7571969	3	+	7563076	7571483	789624	11	389,726,240,112,148,48,78,138,84,51,597,	0,1191,2750,3084,3565,3842,5052,8481,8806,9008,9498,
#Partially deleted in new
chr17	7562225	7571969	chr17:7562225-7571969	1	+	7563076	7571483	789624	12	38,726,240,112,148,48,78,138,84,51,498,61,	0,840,2399,2733,3214,3491,4701,8130,8455,8657,9147,9683,
#Partially deleted in new
chr17	7563286	7578715	chr17:7563286-7578715	3	+	7563286	7572395	789624	21	505,240,112,148,48,78,138,84,51,107,581,49,133,140,169,110,144,138,90,80,374,	0,1338,1672,2153,2430,3640,7069,7394,7596,8086,8997,10973,11259,11832,13237,13769,14057,14282,14540,14878,15055,
#Deleted in new
chr17	7564361	7566033	chr17:7564361-7566033	0	+	7564361	7564361	8553170	2	503,1075,	0,597,
#Deleted in new
chr17	7564780	7566051	chr17:7564780-7566051	0	+	7564780	7564780	8553170	4	84,112,148,335,	0,178,659,936,
#Partially deleted in new
chr17	7564842	7571670	chr17:7564842-7571670	0	+	7564842	7571483	789624	8	22,112,148,48,138,84,51,298,	0,116,597,874,5513,5838,6040,6530,
#Partially deleted in new
chr17	7565463	7571461	chr17:7565463-7571461	0	+	7565463	7565760	789624	7	124,70,78,138,84,51,89,	0,231,1463,4892,5217,5419,5909,
#Partially deleted in new
chr17	7566947	7571880	chr17:7566947-7571880	0	+	7566947	7571808	789624	6	57,138,84,51,107,169,	0,3408,3733,3935,4425,4764,
#Deleted in new
chr17	7570355	7571727	chr17:7570355-7571727	0	+	7570355	7571483	789624	2	138,355,	0,1017,
#Deleted in new
chr17	7570355	7571686	chr17:7570355-7571686	0	+	7570355	7571483	789624	3	138,84,314,	0,325,1017,
#Deleted in new
chr17	7571363	7571890	chr17:7571363-7571890	0	+	7571363	7571363	8553170	1	527,	0,
#Partially deleted in new
chr17	7572705	7577115	chr17:7572705-7577115	0	+	7572765	7574550	789624	6	159,49,133,140,169,60,	0,1554,1840,2413,3818,4350,
#Deleted in new
chr17	7572823	7575171	chr17:7572823-7575171	0	+	7572823	7572823	8553170	3	41,49,626,	0,1436,1722,
#Partially deleted in new
chr17	7572825	7579005	chr17:7572825-7579005	3	+	7572841	7578486	0	11	39,49,133,140,169,110,144,138,90,80,664,	0,1434,1720,2293,3698,4230,4518,4743,5001,5339,5516,
#Partially deleted in new
chr17	7572825	7578401	chr17:7572825-7578401	0	+	7572825	7572825	8553170	6	39,140,110,144,676,60,	0,2293,4230,4518,4743,5516,
#Partially deleted in new
chr17	7572825	7576587	chr17:7572825-7576587	0	+	7572841	7574550	789624	6	39,148,49,133,140,64,	0,574,1434,1720,2293,3698,
#Partially deleted in new
chr17	7572825	7577706	chr17:7572825-7577706	0	+	7572841	7577706	789624	8	39,49,133,140,163,110,144,138,	0,1434,1720,2293,3704,4230,4518,4743,
#Partially deleted in new
chr17	7572825	7577682	chr17:7572825-7577682	0	+	7577072	7577682	789624	5	39,140,110,144,114,	0,2293,4230,4518,4743,
#Deleted in new
chr17	7572825	7575658	chr17:7572825-7575658	0	+	7572841	7574550	789624	5	39,148,49,133,540,	0,574,1434,1720,2293,
#Deleted in new
chr17	7572825	7574782	chr17:7572825-7574782	0	+	7572825	7572825	8553170	2	39,523,	0,1434,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	7572825	7582024	chr17:7572825-7582024	3	+	7572825	7572825	8553170	12	39,49,133,140,169,110,144,2759,120,73,171,647,	0,1434,1720,2293,3698,4230,4518,4743,7640,7885,8070,8552,
#Partially deleted in new
chr17	7572825	7576690	chr17:7572825-7576690	0	+	7574581	7576690	789624	5	39,49,157,140,167,	0,1434,1696,2293,3698,
#Deleted in new
chr17	7572825	7575679	chr17:7572825-7575679	0	+	7572825	7572825	8553170	4	39,49,133,561,	0,1434,1720,2293,
#Deleted in new
chr17	7572826	7575320	chr17:7572826-7575320	0	+	7572841	7574585	789624	5	38,148,49,131,202,	0,573,1433,1721,2292,
#Deleted in new
chr17	7572827	7575077	chr17:7572827-7575077	0	+	7572827	7572827	8553170	2	37,532,	0,1718,
#Partially deleted in new
chr17	7572827	7578467	chr17:7572827-7578467	0	+	7572841	7576606	789624	8	37,49,133,169,110,144,676,126,	0,1432,1718,3696,4228,4516,4741,5514,
#Deleted in new
chr17	7572827	7575508	chr17:7572827-7575508	0	+	7572827	7572827	8553170	3	37,133,390,	0,1718,2291,
#Partially deleted in new
chr17	7572827	7576761	chr17:7572827-7576761	0	+	7572827	7572827	8553170	5	37,49,133,140,232,	0,1432,1718,2291,3702,
#Partially deleted in new
chr17	7572827	7577139	chr17:7572827-7577139	0	+	7574581	7577139	789624	5	37,133,140,169,84,	0,1718,2291,3696,4228,
#Partially deleted in new
chr17	7572827	7576732	chr17:7572827-7576732	0	+	7572827	7572827	8553170	3	37,419,209,	0,1432,3696,
#Partially deleted in new
chr17	7572827	7577363	chr17:7572827-7577363	0	+	7572827	7572827	8553170	6	37,49,133,140,642,20,	0,1432,1718,2291,3696,4516,
#Partially deleted in new
chr17	7572827	7577110	chr17:7572827-7577110	0	+	7572841	7577110	789624	6	37,43,133,140,169,55,	0,1438,1718,2291,3696,4228,
#Partially deleted in new
chr17	7572836	7578641	chr17:7572836-7578641	1	+	7572841	7578371	0	11	28,49,133,140,169,110,144,138,90,18,300,	0,1423,1709,2282,3687,4219,4507,4732,4990,5390,5505,
#Partially deleted in new
chr17	7572837	7577704	chr17:7572837-7577704	0	+	7572841	7577704	789624	8	27,49,133,140,169,110,54,136,	0,1422,1708,2281,3686,4218,4596,4731,
#Partially deleted in new
chr17	7572841	7578990	chr17:7572841-7578990	1	+	7572841	7578371	789624	10	23,49,133,140,169,110,144,138,90,649,	0,1418,1704,2277,3682,4214,4502,4727,4985,5500,
#Partially deleted in new
chr17	7573234	7577619	chr17:7573234-7577619	0	+	7574284	7577619	789624	8	313,49,133,140,169,110,144,51,	0,1025,1311,1884,3289,3821,4109,4334,
#Deleted in new
chr17	7573315	7575165	chr17:7573315-7575165	0	+	7573507	7575165	789624	4	218,49,133,47,	0,944,1230,1803,
#Deleted in new
chr17	7573432	7575352	chr17:7573432-7575352	0	+	7573432	7573432	8553170	4	115,49,133,234,	0,827,1113,1686,
#Partially deleted in new
chr17	7573721	7577151	chr17:7573721-7577151	0	+	7573721	7577151	789624	6	55,49,133,140,169,96,	0,538,824,1397,2802,3334,
#Deleted in new
chr17	7573843	7575216	chr17:7573843-7575216	0	+	7574284	7575216	789624	3	465,133,98,	0,702,1275,
#Partially deleted in new
chr17	7574258	7578616	chr17:7574258-7578616	0	+	7574258	7574258	8553170	9	50,133,140,169,110,144,138,418,275,	0,287,860,2265,2797,3085,3310,3568,4083,
#Deleted in new
chr17	7574712	7574847	chr17:7574712-7574847	3	+	7574712	7574712	789624	1	135,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	7574745	7576185	chr17:7574745-7576185	0	+	7574745	7574745	8553170	1	1440,	0,
#Partially deleted in new
chr17	7575187	7577567	chr17:7575187-7577567	0	+	7575187	7575187	8553170	4	71,169,110,224,	0,1336,1868,2156,
#Deleted in new
chr17	7576531	7578631	chr17:7576531-7578631	0	+	7576531	7578371	789624	7	161,110,144,138,90,18,290,	0,524,812,1037,1295,1695,1810,
#Deleted in new
chr17	7576810	7576952	chr17:7576810-7576952	3	+	7576810	7576810	789624	1	142,	0,
#Deleted in new
chr17	7577147	7577931	chr17:7577147-7577931	0	+	7577147	7577147	8553170	3	340,138,105,	0,421,679,
#Deleted in new
chr17	7577206	7577886	chr17:7577206-7577886	0	+	7577206	7577206	8553170	2	281,318,	0,362,
#Deleted in new
chr17	7577565	7578306	chr17:7577565-7578306	0	+	7577565	7577565	8553170	2	141,480,	0,261,
#Deleted in new
chr17	7577634	7578630	chr17:7577634-7578630	0	+	7577634	7578164	789624	4	72,90,125,289,	0,192,485,707,
#Deleted in new
chr17	7577686	7578195	chr17:7577686-7578195	0	+	7577686	7577686	8553170	3	20,90,95,	0,140,414,
#Deleted in new
chr17	7577954	7578091	chr17:7577954-7578091	3	+	7577954	7577954	789624	1	137,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	7579466	7582113	chr17:7579466-7582113	3	+	7579677	7581511	789624	6	260,518,120,73,171,736,	0,343,999,1244,1429,1911,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	7579490	7582111	chr17:7579490-7582111	1	+	7579677	7581511	789624	6	236,437,120,73,171,734,	0,400,975,1220,1405,1887,
#Deleted in new
chr17	7579637	7580479	chr17:7579637-7580479	0	+	7579677	7580479	789624	3	89,479,14,	0,211,828,
#Deleted in new
chr17	7580494	7581622	chr17:7580494-7581622	0	+	7580494	7581095	789624	3	91,73,727,	0,216,401,
#Deleted in new
chr17	7581963	7584072	chr17:7581963-7584072	3	-	7581963	7581963	789624	2	197,155,	0,1954,
#Deleted in new
chr17	7582011	7583010	chr17:7582011-7583010	0	-	7582011	7582011	8553170	2	152,135,	0,864,
#Deleted in new
chr17	7582015	7584068	chr17:7582015-7584068	0	-	7582015	7582015	8553170	2	148,151,	0,1902,
#Deleted in new
chr17	7582471	7583518	chr17:7582471-7583518	1	-	7582471	7582471	8553170	2	60,619,	0,428,
#Deleted in new
chr17	7583528	7584256	chr17:7583528-7584256	1	+	7583862	7584021	789624	1	728,	0,
#Partially deleted in new
chr17	7583646	7588192	chr17:7583646-7588192	3	+	7583862	7587551	789624	7	319,66,133,86,119,111,767,	0,2085,2299,3045,3252,3514,3779,
#Partially deleted in new
chr17	7583665	7587681	chr17:7583665-7587681	0	+	7583862	7585967	789624	7	300,66,128,122,119,111,256,	0,2066,2285,2990,3233,3495,3760,
#Partially deleted in new
chr17	7583820	7587790	chr17:7583820-7587790	0	+	7583862	7585967	789624	7	145,66,128,86,119,111,365,	0,1911,2130,2871,3078,3340,3605,
#Partially deleted in new
chr17	7583827	7587955	chr17:7583827-7587955	1	+	7583862	7587444	789624	6	138,66,133,147,111,530,	0,1904,2118,2864,3333,3598,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	7583847	7586438	chr17:7583847-7586438	0	+	7583847	7583847	8553170	3	118,66,493,	0,1884,2098,
#Partially deleted in new
chr17	7583847	7586961	chr17:7583847-7586961	0	+	7583847	7583847	8553170	4	118,66,128,270,	0,1884,2103,2844,
#Partially deleted in new
chr17	7583847	7587201	chr17:7583847-7587201	0	+	7583847	7583847	8553170	4	118,66,133,546,	0,1884,2098,2808,
#Partially deleted in new
chr17	7583848	7587696	chr17:7583848-7587696	0	+	7583862	7585967	789624	6	117,66,128,147,111,271,	0,1883,2102,2843,3312,3577,
#Partially deleted in new
chr17	7583851	7588176	chr17:7583851-7588176	0	+	7583851	7583851	8553170	6	114,66,133,86,373,751,	0,1880,2094,2840,3047,3574,
#Partially deleted in new
chr17	7583851	7588177	chr17:7583851-7588177	0	+	7583851	7583851	8553170	5	114,66,133,580,752,	0,1880,2094,2840,3574,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	7583851	7586488	chr17:7583851-7586488	0	+	7583862	7586082	789624	4	114,66,269,114,	0,1880,2094,2523,
#Partially deleted in new
chr17	7583851	7587474	chr17:7583851-7587474	0	+	7583862	7586683	789624	7	114,66,133,122,119,111,49,	0,1880,2094,2804,3047,3309,3574,
#Partially deleted in new
chr17	7583851	7592494	chr17:7583851-7592494	0	+	7583862	7592494	789624	5	114,66,133,111,51,	0,1880,2094,3309,8592,
#Partially deleted in new
chr17	7583852	7592789	chr17:7583852-7592789	1	+	7583862	7592472	789624	6	113,66,133,119,111,346,	0,1879,2093,3046,3308,8591,
#Partially deleted in new
chr17	7583859	7587685	chr17:7583859-7587685	0	+	7583862	7586683	789624	7	106,66,133,122,119,111,260,	0,1872,2086,2796,3039,3301,3566,
#Partially deleted in new
chr17	7583859	7586961	chr17:7583859-7586961	0	+	7583862	7585967	789624	5	106,103,133,86,63,	0,1835,2086,2832,3039,
#Partially deleted in new
chr17	7583859	7587043	chr17:7583859-7587043	0	+	7583862	7586683	789624	5	106,66,133,122,145,	0,1872,2086,2796,3039,
#Partially deleted in new
chr17	7583861	7587243	chr17:7583861-7587243	0	+	7583862	7587243	789624	6	104,66,133,86,119,74,	0,1870,2084,2830,3037,3308,
#Partially deleted in new
chr17	7583864	7587595	chr17:7583864-7587595	0	+	7583864	7583864	8553170	6	101,66,128,86,373,170,	0,1867,2086,2827,3034,3561,
#Partially deleted in new
chr17	7583869	7586180	chr17:7583869-7586180	0	+	7583869	7583869	8553170	3	96,66,230,	0,1862,2081,
#Partially deleted in new
chr17	7583873	7587542	chr17:7583873-7587542	0	+	7583873	7586717	789624	6	92,66,86,119,111,117,	0,1858,2818,3025,3287,3552,
#Partially deleted in new
chr17	7583874	7588187	chr17:7583874-7588187	0	+	7583874	7588100	789624	5	91,66,133,55,93,	0,1857,2071,2817,4220,
#Partially deleted in new
chr17	7583884	7587643	chr17:7583884-7587643	0	+	7583884	7585967	789624	7	81,66,128,86,119,111,218,	0,1847,2066,2807,3014,3276,3541,
#Partially deleted in new
chr17	7583892	7587258	chr17:7583892-7587258	0	+	7583892	7587258	789624	5	73,66,133,86,98,	0,1839,2053,2799,3268,
#Partially deleted in new
chr17	7583894	7587938	chr17:7583894-7587938	0	+	7583894	7586717	789624	5	71,86,119,111,513,	0,2797,3004,3266,3531,
#Deleted in new
chr17	7586468	7587817	chr17:7586468-7587817	0	+	7586468	7586468	8553170	2	803,392,	0,957,
#Deleted in new
chr17	7588177	7590170	chr17:7588177-7590170	3	-	7588377	7589676	789624	2	369,1027,	0,966,
#Deleted in new
chr17	7588177	7590072	chr17:7588177-7590072	1	-	7588377	7589676	789624	3	369,595,86,	0,966,1809,
#Deleted in new
chr17	7588998	7590091	chr17:7588998-7590091	1	-	7589139	7589676	789624	1	1093,	0,
#Partially deleted in new
chr17	7591229	7614867	chr17:7591229-7614867	3	-	7591829	7614532	0	17	696,101,96,201,198,223,87,110,79,171,117,94,149,72,94,53,416,	0,1024,1274,1464,1754,2173,2688,3008,3449,4594,10179,11679,12527,12779,14415,14867,23222,
#Deleted in new
chr17	7591441	7592357	chr17:7591441-7592357	0	-	7591441	7591441	8553170	3	484,87,104,	0,629,812,
#Deleted in new
chr17	7593578	7594332	chr17:7593578-7594332	0	-	7593578	7593578	8553170	2	47,415,	0,339,
#Partially deleted in new
chr17	7594374	7601436	chr17:7594374-7601436	0	-	7594374	7594374	8553170	3	383,171,28,	0,1449,7034,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	7594671	7596480	chr17:7594671-7596480	0	-	7594671	7594671	8553170	2	86,657,	0,1152,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	7602732	7604066	chr17:7602732-7604066	0	-	7602732	7602732	8553170	3	270,149,58,	0,1024,1276,
#Partially deleted in new
chr17	7602967	7614871	chr17:7602967-7614871	0	-	7602967	7606020	789624	6	35,149,72,94,134,81,	0,789,1041,2677,3048,11823,
#Deleted in new
chr17	7613945	7614109	chr17:7613945-7614109	0	+	7613945	7613945	8553170	1	164,	0,
#Partially deleted in new
chr17	7614063	7633354	chr17:7614063-7633354	1	+	7630478	7633352	789624	6	48,90,190,162,160,151,	0,16354,16616,17136,17525,19140,
#Partially deleted in new
chr17	7614063	7633354	chr17:7614063-7633354	1	+	7630478	7633233	789624	4	48,90,190,151,	0,16354,16616,19140,
#Partially deleted in new
chr17	7614063	7633354	chr17:7614063-7633354	1	+	7630478	7633352	789624	7	48,90,190,160,137,208,151,	0,16354,16616,17525,17815,18688,19140,
#Partially deleted in new
chr17	7614063	7633354	chr17:7614063-7633354	1	+	7630478	7633233	789624	7	48,90,190,162,160,137,151,	0,16354,16616,17136,17525,17815,19140,
#Partially deleted in new
chr17	7614063	7633354	chr17:7614063-7633354	1	+	7630478	7633352	789624	8	48,90,190,162,160,137,208,151,	0,16354,16616,17136,17525,17815,18688,19140,
#Partially deleted in new
chr17	7614063	7633354	chr17:7614063-7633354	1	+	7630478	7633352	789624	5	48,90,190,160,151,	0,16354,16616,17525,19140,
#Partially deleted in new
chr17	7614063	7633354	chr17:7614063-7633354	1	+	7630478	7633233	789624	6	48,90,190,160,137,151,	0,16354,16616,17525,17815,19140,
#Deleted in new
chr17	7626233	7627855	chr17:7626233-7627855	3	-	7626446	7627635	0	6	381,41,102,84,52,286,	0,519,709,909,1129,1336,
#Deleted in new
chr17	7626233	7627796	chr17:7626233-7627796	0	-	7626233	7626233	8553170	1	1563,	0,
#Deleted in new
chr17	7626236	7627869	chr17:7626236-7627869	0	-	7626236	7626236	8553170	6	378,41,102,84,52,317,	0,516,706,906,1126,1316,
#Deleted in new
chr17	7626236	7627139	chr17:7626236-7627139	0	-	7626236	7626236	8553170	2	378,387,	0,516,
#Deleted in new
chr17	7626237	7627479	chr17:7626237-7627479	0	-	7626237	7626237	8553170	3	377,41,117,	0,515,1125,
#Deleted in new
chr17	7626336	7627859	chr17:7626336-7627859	0	-	7627367	7627635	789624	6	278,41,102,84,52,303,	0,416,606,806,1026,1220,
#Deleted in new
chr17	7626341	7627796	chr17:7626341-7627796	0	-	7627367	7627635	789624	6	273,87,102,84,52,240,	0,365,601,801,1021,1215,
#Deleted in new
chr17	7626365	7627802	chr17:7626365-7627802	0	-	7626365	7626365	8553170	4	249,41,84,440,	0,387,777,997,
#Deleted in new
chr17	7626387	7627805	chr17:7626387-7627805	1	-	7626446	7627635	789624	5	227,41,84,52,236,	0,365,755,975,1182,
#Deleted in new
chr17	7626402	7627802	chr17:7626402-7627802	0	-	7626402	7626402	8553170	5	212,87,84,52,250,	0,304,740,960,1150,
#Deleted in new
chr17	7626533	7627876	chr17:7626533-7627876	0	-	7626533	7626533	8553170	5	81,41,84,52,324,	0,219,609,829,1019,
#Deleted in new
chr17	7626781	7627835	chr17:7626781-7627835	0	-	7626781	7626781	8553170	4	12,102,272,283,	0,161,361,771,
#Deleted in new
chr17	7626945	7627846	chr17:7626945-7627846	0	-	7626945	7626945	8553170	2	99,704,	0,197,
#Deleted in new
chr17	7626958	7627805	chr17:7626958-7627805	0	-	7626958	7626958	8553170	2	268,443,	0,404,
#Partially deleted in new
chr17	7627968	7633382	chr17:7627968-7633382	1	+	7630478	7633352	789624	8	183,92,190,162,160,137,208,179,	0,2447,2711,3231,3620,3910,4783,5235,
#Partially deleted in new
chr17	7627968	7631260	chr17:7627968-7631260	0	+	7630478	7631260	789624	4	183,92,190,61,	0,2447,2711,3231,
#Partially deleted in new
chr17	7630093	7633382	chr17:7630093-7633382	1	+	7630172	7633352	0	6	190,92,190,162,160,179,	0,322,586,1106,1495,3110,
#Partially deleted in new
chr17	7630141	7633383	chr17:7630141-7633383	3	+	7630172	7633352	0	8	142,92,190,162,160,137,208,180,	0,274,538,1058,1447,1737,2610,3062,
#Partially deleted in new
chr17	7630151	7633372	chr17:7630151-7633372	1	+	7630172	7633233	0	7	132,92,190,162,160,137,169,	0,264,528,1048,1437,1727,3052,
#Partially deleted in new
chr17	7630151	7633372	chr17:7630151-7633372	0	+	7630172	7631671	789624	8	132,92,152,108,160,137,208,169,	0,264,528,1102,1437,1727,2600,3052,
#Partially deleted in new
chr17	7630151	7633372	chr17:7630151-7633372	0	+	7630172	7630346	789624	7	356,190,162,160,137,208,169,	0,528,1048,1437,1727,2600,3052,
#Partially deleted in new
chr17	7630151	7633372	chr17:7630151-7633372	1	+	7630172	7633352	0	8	132,92,190,162,106,137,208,169,	0,264,528,1048,1491,1727,2600,3052,
#Partially deleted in new
chr17	7630253	7633354	chr17:7630253-7633354	0	+	7630253	7633233	789624	6	30,92,190,160,137,151,	0,162,426,1335,1625,2950,
#Partially deleted in new
chr17	7630253	7633354	chr17:7630253-7633354	0	+	7630253	7633233	789624	4	30,92,190,151,	0,162,426,2950,
#Partially deleted in new
chr17	7630253	7633354	chr17:7630253-7633354	0	+	7630253	7633352	789624	5	30,92,190,160,151,	0,162,426,1335,2950,
#Partially deleted in new
chr17	7630253	7633354	chr17:7630253-7633354	0	+	7630253	7633352	789624	6	30,92,190,162,160,151,	0,162,426,946,1335,2950,
#Partially deleted in new
chr17	7631308	7632057	chr17:7631308-7632057	0	+	7631308	7631308	8553170	2	53,469,	0,280,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	7646626	7655768	chr17:7646626-7655768	0	+	7653845	7655768	789624	6	75,105,206,57,99,38,	0,7214,7425,8001,8900,9104,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	7651111	7657768	chr17:7651111-7657768	3	+	7651518	7655895	789624	7	519,129,105,206,57,99,2038,	0,2262,2729,2940,3516,4415,4619,
#Partially deleted in new
chr17	7654108	7655934	chr17:7654108-7655934	0	+	7654108	7655895	789624	6	149,57,27,21,99,204,	0,519,683,1127,1418,1622,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	7661778	7676594	chr17:7661778-7676594	1	-	7661938	7676594	789624	7	236,110,113,184,279,22,74,	0,12402,13080,13274,14215,14603,14742,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	7665415	7687491	chr17:7665415-7687491	0	-	7667175	7676251	789624	12	116,524,107,74,137,110,113,184,279,22,102,115,	0,1486,5193,8119,8285,8765,9443,9637,10578,10966,11105,21961,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	7666085	7676594	chr17:7666085-7676594	1	-	7666205	7676594	789624	9	159,74,137,110,113,184,279,22,74,	0,7449,7615,8095,8773,8967,9908,10296,10435,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	7668401	7687538	chr17:7668401-7687538	3	-	7669608	7676594	0	11	1289,107,74,137,110,113,184,279,22,102,162,	0,2207,5133,5299,5779,6457,6651,7592,7980,8119,18975,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	7668401	7675493	chr17:7668401-7675493	1	-	7673218	7675215	0	8	1289,107,60,74,137,110,113,441,	0,2207,4805,5133,5299,5779,6457,6651,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	7668401	7675493	chr17:7668401-7675493	1	-	7669608	7675215	0	7	1289,107,74,137,110,113,441,	0,2207,5133,5299,5779,6457,6651,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	7668401	7675493	chr17:7668401-7675493	1	-	7673306	7675215	0	8	1289,107,133,74,137,110,113,441,	0,2207,4805,5133,5299,5779,6457,6651,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	7668401	7687481	chr17:7668401-7687481	1	-	7669608	7676251	0	10	1289,107,74,137,110,113,184,279,241,105,	0,2207,5133,5299,5779,6457,6651,7592,7980,18975,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	7668401	7675493	chr17:7668401-7675493	1	-	7673218	7675134	789624	8	1289,107,60,74,137,110,113,441,	0,2207,4805,5133,5299,5779,6457,6651,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	7668401	7687550	chr17:7668401-7687550	1	-	7673306	7676594	0	12	1289,107,133,74,137,110,113,184,279,22,102,174,	0,2207,4805,5133,5299,5779,6457,6651,7592,7980,8119,18975,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	7668401	7675493	chr17:7668401-7675493	1	-	7673306	7675134	789624	8	1289,107,133,74,137,110,113,441,	0,2207,4805,5133,5299,5779,6457,6651,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	7668401	7675493	chr17:7668401-7675493	1	-	7669608	7675134	789624	7	1289,107,74,137,110,113,441,	0,2207,5133,5299,5779,6457,6651,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	7668401	7687538	chr17:7668401-7687538	1	-	7669608	7676251	0	11	1289,107,74,137,110,113,184,279,22,102,162,	0,2207,5133,5299,5779,6457,6651,7592,7980,8119,18975,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	7668403	7687481	chr17:7668403-7687481	1	-	7673306	7676594	0	12	1287,107,133,74,137,110,113,184,279,22,102,105,	0,2205,4803,5131,5297,5777,6455,6649,7590,7978,8117,18973,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	7668403	7687481	chr17:7668403-7687481	1	-	7673218	7676594	0	12	1287,107,60,74,137,110,113,184,279,22,102,105,	0,2205,4803,5131,5297,5777,6455,6649,7590,7978,8117,18973,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	7668403	7687481	chr17:7668403-7687481	1	-	7673218	7676251	0	12	1287,107,60,74,137,110,113,184,279,22,102,105,	0,2205,4803,5131,5297,5777,6455,6649,7590,7978,8117,18973,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	7668403	7687481	chr17:7668403-7687481	1	-	7673306	7676251	0	12	1287,107,133,74,137,110,113,184,279,22,102,105,	0,2205,4803,5131,5297,5777,6455,6649,7590,7978,8117,18973,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	7668420	7687487	chr17:7668420-7687487	1	-	7669608	7676594	0	11	1270,107,74,137,110,113,184,279,22,99,111,	0,2188,5114,5280,5760,6438,6632,7573,7961,8100,18956,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	7668420	7687487	chr17:7668420-7687487	1	-	7669608	7676251	0	11	1270,107,74,137,110,113,184,279,22,99,111,	0,2188,5114,5280,5760,6438,6632,7573,7961,8100,18956,
#Partially deleted in new
chr17	7669568	7673587	chr17:7669568-7673587	0	-	7669648	7673587	789624	2	122,53,	0,3966,
#Partially deleted in new
chr17	7669608	7676594	chr17:7669608-7676594	1	-	7669608	7676594	789624	11	82,107,74,137,110,113,186,7,237,22,74,	0,1000,3926,4092,4572,5250,5444,6416,6427,6773,6912,
#Partially deleted in new
chr17	7673534	7687487	chr17:7673534-7687487	0	-	7673534	7675215	789624	6	74,137,110,113,184,111,	0,166,646,1324,1518,13842,
#Partially deleted in new
chr17	7674216	7687427	chr17:7674216-7687427	0	-	7674216	7676594	789624	6	74,113,184,22,102,51,	0,642,836,2165,2304,13160,
#Partially deleted in new
chr17	7674253	7675119	chr17:7674253-7675119	0	-	7674253	7674253	8553170	2	37,67,	0,799,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	7674525	7687487	chr17:7674525-7687487	0	-	7674525	7674525	8553170	5	446,184,279,241,111,	0,527,1468,1856,12851,
#Partially deleted in new
chr17	7675115	7677434	chr17:7675115-7677434	0	-	7675115	7676594	789624	5	121,279,22,102,110,	0,878,1266,1405,2209,
#Partially deleted in new
chr17	7675161	7687487	chr17:7675161-7687487	0	-	7675161	7676594	789624	5	54,279,22,102,111,	0,832,1220,1359,12215,
#Partially deleted in new
chr17	7675228	7687427	chr17:7675228-7687427	0	-	7675228	7676594	789624	6	8,279,22,102,103,51,	0,765,1153,1292,2096,12148,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	7685259	7686371	chr17:7685259-7686371	0	-	7685259	7685259	8553170	1	1112,	0,
#Partially deleted in new
chr17	7686070	7703502	chr17:7686070-7703502	3	+	7688648	7703486	789624	11	154,432,99,112,89,91,133,209,104,135,260,	0,2577,3153,3519,14670,15388,15586,16273,16672,16922,17172,
#Partially deleted in new
chr17	7686300	7703502	chr17:7686300-7703502	1	+	7688648	7703486	789624	10	2779,99,112,89,91,133,209,104,135,260,	0,2923,3289,14440,15158,15356,16043,16442,16692,16942,
#Partially deleted in new
chr17	7687439	7703502	chr17:7687439-7703502	1	+	7688648	7703486	789624	11	164,432,99,112,89,91,133,209,104,135,260,	0,1208,1784,2150,13301,14019,14217,14904,15303,15553,15803,
#Partially deleted in new
chr17	7687599	7703501	chr17:7687599-7703501	0	+	7688648	7701666	789624	11	962,432,99,112,89,123,133,209,104,135,259,	0,1048,1624,1990,13141,13827,14057,14744,15143,15393,15643,
#Partially deleted in new
chr17	7688320	7703502	chr17:7688320-7703502	1	+	7688648	7703486	789624	11	241,432,99,112,89,91,133,209,104,135,260,	0,327,903,1269,12420,13138,13336,14023,14422,14672,14922,
#Partially deleted in new
chr17	7688476	7703502	chr17:7688476-7703502	0	+	7688476	7688476	8553170	9	85,432,99,112,89,123,1190,135,260,	0,171,747,1113,12264,12950,13180,14516,14766,
#Partially deleted in new
chr17	7688476	7703502	chr17:7688476-7703502	1	+	7688648	7703486	789624	9	603,112,89,91,133,209,104,135,260,	0,1113,12264,12982,13180,13867,14266,14516,14766,
#Deleted in new
chr17	7701656	7703374	chr17:7701656-7703374	0	+	7701656	7702750	789624	4	133,104,135,132,	0,1086,1336,1586,
#Deleted in new
chr17	7702117	7703502	chr17:7702117-7703502	0	+	7702117	7702117	8553170	4	435,168,135,260,	0,625,875,1125,
#Deleted in new
chr17	7702880	7703502	chr17:7702880-7703502	0	+	7702880	7702880	8553170	2	247,260,	0,362,
#Partially deleted in new
chr17	7705201	7711378	chr17:7705201-7711378	3	+	7705598	7709576	0	5	519,293,93,105,2212,	0,2756,3233,3433,3965,
#Partially deleted in new
chr17	7717353	7833744	chr17:7717353-7833744	3	+	7719734	7833533	789624	86	1446,180,62,171,229,111,239,192,206,130,183,215,147,157,240,189,148,193,201,157,175,164,162,104,157,83,181,139,218,102,126,111,189,104,190,181,128,153,126,219,118,137,138,159,153,92,199,225,105,189,86,131,150,168,161,140,133,140,211,117,142,170,117,165,126,149,67,151,149,134,145,200,127,187,149,184,191,192,185,229,152,115,177,75,151,366,	0,2367,6274,9768,15733,16829,17116,19713,22379,23066,23456,25574,39737,41141,41531,42068,42437,43386,46477,46763,48037,48964,50546,50810,52898,53203,53399,53976,57405,57887,58670,59425,60092,60723,60926,61889,62803,63276,63688,68770,69216,69543,70506,70732,74563,74898,75303,75627,76900,79110,79822,80046,80326,80803,81204,81749,84224,84524,86902,87604,87898,89796,90116,99217,99936,100207,100436,100592,100958,101289,101565,101855,103889,106088,106480,106767,107183,112946,113304,113732,114036,114307,115225,115500,115717,116025,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	7717760	7743901	chr17:7717760-7743901	1	+	7719734	7743611	789624	14	71,180,62,171,229,111,239,192,158,88,206,130,183,974,	0,1960,5867,9361,15326,16422,16709,19306,20202,21166,21972,22659,23049,25167,
#Partially deleted in new
chr17	7719720	7833740	chr17:7719720-7833740	1	+	7719734	7833533	789624	85	180,62,171,229,111,239,192,206,130,183,215,147,157,240,189,148,193,201,157,175,164,162,104,157,83,181,139,218,102,126,111,189,104,190,181,128,153,126,219,118,137,138,159,153,92,199,225,105,189,86,131,150,168,161,140,133,140,211,117,142,170,117,165,126,149,67,151,149,134,145,200,127,187,149,184,191,192,185,229,152,115,177,75,151,362,	0,3907,7401,13366,14462,14749,17346,20012,20699,21089,23207,37370,38774,39164,39701,40070,41019,44110,44396,45670,46597,48179,48443,50531,50836,51032,51609,55038,55520,56303,57058,57725,58356,58559,59522,60436,60909,61321,66403,66849,67176,68139,68365,72196,72531,72936,73260,74533,76743,77455,77679,77959,78436,78837,79382,81857,82157,84535,85237,85531,87429,87749,96850,97569,97840,98069,98225,98591,98922,99198,99488,101522,103721,104113,104400,104816,110579,110937,111365,111669,111940,112858,113133,113350,113658,
#Partially deleted in new
chr17	7740595	7743217	chr17:7740595-7743217	0	+	7740595	7740595	8553170	2	397,290,	0,2332,
#Deleted in new
chr17	7754319	7754976	chr17:7754319-7754976	7	+	7754319	7754319	16724991	1	657,	0,
#Deleted in new
chr17	7754393	7754853	chr17:7754393-7754853	5	+	7754393	7754393	16724991	1	460,	0,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr17	7760743	7787750	chr17:7760743-7787750	0	+	7760743	7767961	789624	22	189,201,157,175,162,104,157,377,139,218,102,126,111,189,104,190,181,128,153,126,564,854,	0,3087,3373,4647,7156,7420,9508,9813,10586,14015,14497,15280,16035,16702,17333,17536,18499,19413,19886,20298,25380,26153,
#Partially deleted in new
chr17	7804319	7831678	chr17:7804319-7831678	0	+	7804319	7831678	789624	23	147,142,170,117,165,126,149,67,151,149,134,145,200,127,187,149,184,191,192,185,229,152,18,	0,932,2830,3150,12251,12970,13241,13470,13626,13992,14323,14599,14889,16923,19122,19514,19801,20217,25980,26338,26766,27070,27341,
#Partially deleted in new
chr17	7839903	7854796	chr17:7839903-7854796	3	+	7845554	7853521	0	22	121,120,143,142,99,220,93,162,198,348,2183,127,106,206,65,72,149,115,188,142,127,1587,	0,4997,5410,5646,5968,6174,6496,6675,6915,7201,7642,9917,10168,11117,11426,11574,11744,12047,12245,12591,13096,13306,
#Partially deleted in new
chr17	7839903	7845347	chr17:7839903-7845347	0	+	7839903	7839903	8553170	4	121,87,120,34,	0,380,4997,5410,
#Partially deleted in new
chr17	7839961	7853680	chr17:7839961-7853680	1	+	7845554	7853521	0	23	63,120,143,142,99,220,93,162,198,348,2183,127,106,206,65,72,149,115,188,142,127,171,183,	0,4939,5352,5588,5910,6116,6438,6617,6857,7143,7584,9859,10110,11059,11368,11516,11686,11989,12187,12533,13038,13248,13536,
#Deleted in new
chr17	7839990	7840681	chr17:7839990-7840681	0	+	7839990	7839990	8553170	2	34,398,	0,293,
#Deleted in new
chr17	7844206	7844972	chr17:7844206-7844972	0	+	7844206	7844206	8553170	2	147,72,	0,694,
#Deleted in new
chr17	7844914	7847571	chr17:7844914-7847571	0	+	7845554	7847571	789624	9	106,143,142,99,220,93,162,348,26,	0,399,635,957,1163,1485,1664,2190,2631,
#Deleted in new
chr17	7855064	7856099	chr17:7855064-7856099	3	+	7855074	7855714	789624	2	220,655,	0,380,
#Deleted in new
chr17	7855065	7856061	chr17:7855065-7856061	1	+	7855074	7855941	789624	2	219,291,	0,705,
#Deleted in new
chr17	7856684	7857854	chr17:7856684-7857854	1	-	7856730	7857423	789624	2	159,840,	0,330,
#Deleted in new
chr17	7856684	7857562	chr17:7856684-7857562	1	-	7856730	7857463	789624	3	159,214,180,	0,300,698,
#Deleted in new
chr17	7856684	7858079	chr17:7856684-7858079	1	-	7856730	7857123	789624	3	159,184,186,	0,330,1209,
#Deleted in new
chr17	7856684	7857891	chr17:7856684-7857891	3	-	7856730	7857463	789624	3	159,184,509,	0,330,698,
#Partially deleted in new
chr17	7856685	7885209	chr17:7856685-7885209	1	-	7856730	7866493	789624	5	158,184,68,101,45,	0,329,9805,26549,28479,
#Deleted in new
chr17	7856698	7857263	chr17:7856698-7857263	1	-	7856730	7857123	789624	2	145,279,	0,286,
#Partially deleted in new
chr17	7857562	7885238	chr17:7857562-7885238	0	-	7857562	7857562	8553170	5	160,248,200,101,74,	0,686,1069,25672,27602,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	7857745	7860474	chr17:7857745-7860474	1	+	7858134	7859467	789624	4	549,77,219,1025,	0,657,860,1704,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	7857982	7862282	chr17:7857982-7862282	3	+	7858134	7859612	789624	4	312,77,219,2901,	0,420,623,1399,
#Deleted in new
chr17	7858002	7858689	chr17:7858002-7858689	0	+	7858002	7858002	8553170	2	292,287,	0,400,
#Deleted in new
chr17	7858029	7859774	chr17:7858029-7859774	1	+	7858134	7859612	789624	2	177,393,	0,1352,
#Deleted in new
chr17	7858282	7859544	chr17:7858282-7859544	0	+	7858282	7858282	8553170	3	12,422,163,	0,120,1099,
#Deleted in new
chr17	7858284	7859505	chr17:7858284-7859505	0	+	7858284	7858377	789624	3	195,219,124,	0,321,1097,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	7858942	7866083	chr17:7858942-7866083	3	+	7858942	7858942	8553170	1	7141,	0,
#Partially deleted in new
chr17	7884805	7912760	chr17:7884805-7912760	3	+	7884806	7911585	789624	40	278,113,171,125,284,131,151,194,234,204,212,132,100,192,201,138,122,174,142,132,118,125,232,167,178,66,86,134,145,163,122,136,102,126,109,133,196,164,127,1297,	0,4858,5765,6134,8480,8999,9309,9609,10111,10533,12277,13165,13690,14205,14537,15090,15484,15752,16046,16438,17804,18131,18466,19019,19636,20294,20815,21050,21747,22063,22320,22547,22795,23088,23596,23891,24337,25622,26041,26658,
#Partially deleted in new
chr17	7888790	7912760	chr17:7888790-7912760	1	+	7889000	7911585	789624	39	310,113,171,125,284,131,151,194,234,204,212,132,100,192,201,138,122,174,142,132,118,125,232,167,178,66,86,134,145,163,122,136,126,109,133,196,164,127,1297,	0,873,1780,2149,4495,5014,5324,5624,6126,6548,8292,9180,9705,10220,10552,11105,11499,11767,12061,12453,13819,14146,14481,15034,15651,16309,16830,17065,17762,18078,18335,18562,19103,19611,19906,20352,21637,22056,22673,
#Partially deleted in new
chr17	7888850	7912760	chr17:7888850-7912760	1	+	7889000	7911585	789624	40	250,113,171,125,284,131,151,194,234,204,212,132,100,192,201,138,122,174,142,132,118,125,232,167,178,66,86,134,145,163,122,136,102,126,109,133,196,164,127,1297,	0,813,1720,2089,4435,4954,5264,5564,6066,6488,8232,9120,9645,10160,10492,11045,11439,11707,12001,12393,13759,14086,14421,14974,15591,16249,16770,17005,17702,18018,18275,18502,18750,19043,19551,19846,20292,21577,21996,22613,
#Partially deleted in new
chr17	7889717	7890690	chr17:7889717-7890690	0	+	7889717	7889717	8553170	2	59,115,	0,858,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	7890423	7890605	chr17:7890423-7890605	0	+	7890423	7890423	8553170	2	68,35,	0,147,
#Partially deleted in new
chr17	7890734	7898013	chr17:7890734-7898013	0	+	7890734	7898013	789624	10	7,125,284,131,139,194,234,204,212,43,	0,205,2551,3070,3392,3680,4182,4604,6348,7236,
#Deleted in new
chr17	7893285	7894791	chr17:7893285-7894791	0	+	7893285	7893285	8553170	4	284,131,139,377,	0,519,841,1129,
#Deleted in new
chr17	7893828	7894504	chr17:7893828-7894504	0	+	7893828	7894504	789624	3	107,151,72,	0,286,604,
#Deleted in new
chr17	7894553	7895568	chr17:7894553-7895568	0	+	7894553	7894553	8553170	3	55,234,230,	0,363,785,
#Deleted in new
chr17	7903847	7912760	chr17:7903847-7912760	0	+	7903847	7904176	789624	17	144,491,66,86,134,145,163,122,136,102,129,109,133,196,164,127,1297,	0,281,1252,1773,2008,2705,3021,3278,3505,3753,4043,4554,4849,5295,6580,6999,7616,
#Deleted in new
chr17	7904073	7905656	chr17:7904073-7905656	0	+	7904073	7904073	8553170	3	546,66,36,	0,1026,1547,
#Deleted in new
chr17	7904234	7905276	chr17:7904234-7905276	0	+	7904234	7904234	8553170	2	385,177,	0,865,
#Deleted in new
chr17	7906121	7906260	chr17:7906121-7906260	3	+	7906121	7906121	789624	1	139,	0,
#Deleted in new
chr17	7907438	7908570	chr17:7907438-7908570	0	+	7907438	7907438	8553170	2	581,169,	0,963,
#Deleted in new
chr17	7907695	7911815	chr17:7907695-7911815	0	+	7907695	7911704	789624	8	7,129,109,133,242,164,127,352,	0,195,706,1001,1447,2732,3151,3768,
#Deleted in new
chr17	7907910	7910895	chr17:7907910-7910895	0	+	7907910	7910895	789624	6	109,109,133,196,153,49,	0,491,786,1232,2528,2936,
#Deleted in new
chr17	7907991	7911750	chr17:7907991-7911750	0	+	7907991	7911704	789624	6	28,109,133,196,127,287,	0,410,705,1151,2855,3472,
#Deleted in new
chr17	7909500	7912760	chr17:7909500-7912760	0	+	7909500	7909500	8553170	3	1091,127,1297,	0,1346,1963,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	7913323	7916276	chr17:7913323-7916276	3	-	7915521	7916195	789624	2	2254,598,	0,2355,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	7913339	7915957	chr17:7913339-7915957	1	-	7915538	7915916	789624	1	2618,	0,
#Deleted in new
chr17	7915521	7915975	chr17:7915521-7915975	1	-	7915521	7915916	8553170	2	56,297,	0,157,
#Partially deleted in new
chr17	7921858	7929435	chr17:7921858-7929435	3	-	7923101	7929435	789624	14	1321,89,121,95,121,86,87,44,45,45,80,38,44,242,	0,1597,1852,2109,2286,2556,3238,3824,4072,4200,5485,5798,5924,7335,
#Deleted in new
chr17	7922707	7923842	chr17:7922707-7923842	0	-	7922707	7922707	8553170	2	472,387,	0,748,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	7922938	7929435	chr17:7922938-7929435	0	-	7928309	7929435	789624	15	241,89,121,95,121,84,555,192,44,45,45,80,38,565,91,	0,517,772,1029,1206,1476,1690,2371,2744,2992,3120,4405,4718,4844,6406,
#Partially deleted in new
chr17	7923455	7925975	chr17:7923455-7925975	0	-	7923455	7923455	8553170	6	89,121,298,86,44,45,	0,255,512,959,2227,2475,
#Partially deleted in new
chr17	7925930	7930622	chr17:7925930-7930622	3	-	7930605	7930622	8553170	6	45,45,80,38,44,96,	0,128,1413,1726,1852,4596,
#Deleted in new
chr17	7927126	7928019	chr17:7927126-7928019	0	-	7927126	7927126	8553170	3	297,38,237,	0,530,656,
#Deleted in new
chr17	7927418	7929803	chr17:7927418-7929803	0	-	7929129	7929435	789624	4	5,38,565,707,	0,238,364,1678,
#Deleted in new
chr17	7930344	7931999	chr17:7930344-7931999	3	-	7930605	7931829	789624	5	390,139,71,99,60,	0,666,1161,1386,1595,
#Deleted in new
chr17	7930347	7931962	chr17:7930347-7931962	0	-	7931119	7931829	789624	4	387,139,99,23,	0,663,1383,1592,
#Deleted in new
chr17	7930348	7931945	chr17:7930348-7931945	1	-	7930605	7931829	789624	4	386,139,71,215,	0,662,1157,1382,
#Deleted in new
chr17	7930503	7931921	chr17:7930503-7931921	0	-	7931119	7931829	789624	3	231,139,191,	0,507,1227,
#Deleted in new
chr17	7931034	7931948	chr17:7931034-7931948	0	-	7931034	7931829	789624	4	115,71,99,21,	0,471,696,893,
#Deleted in new
chr17	7931094	7932123	chr17:7931094-7932123	0	-	7931094	7931829	789624	4	55,71,99,184,	0,411,636,845,
#Deleted in new
chr17	7931327	7931917	chr17:7931327-7931917	0	-	7931327	7931327	8553170	2	249,187,	0,403,
#Deleted in new
chr17	7932100	7935145	chr17:7932100-7935145	0	+	7933079	7935145	789624	5	38,422,85,82,157,	0,827,2037,2364,2888,
#Partially deleted in new
chr17	7932154	7949576	chr17:7932154-7949576	1	+	7933079	7949510	789624	19	1195,85,82,157,117,117,99,237,147,134,126,163,259,152,64,171,199,73,192,	0,1983,2310,2834,4211,4546,5009,7358,7941,11236,11968,12321,13573,15416,15761,16002,16332,16930,17230,
#Partially deleted in new
chr17	7932154	7949578	chr17:7932154-7949578	3	+	7933079	7949510	789624	19	1195,85,82,157,117,117,99,237,147,134,126,163,259,152,64,171,133,73,194,	0,1983,2310,2834,4211,4546,5009,7358,7941,11236,11968,12321,13573,15416,15761,16002,16332,16930,17230,
#Deleted in new
chr17	7932241	7933120	chr17:7932241-7933120	0	+	7933079	7933120	789624	2	559,193,	0,686,
#Deleted in new
chr17	7932460	7933310	chr17:7932460-7933310	0	+	7933079	7933310	789624	2	340,355,	0,495,
#Partially deleted in new
chr17	7932762	7937227	chr17:7932762-7937227	0	+	7934161	7937227	789624	8	38,257,85,82,157,117,117,64,	0,330,1375,1702,2226,3603,3938,4401,
#Partially deleted in new
chr17	7933079	7949578	chr17:7933079-7949578	1	+	7933079	7949510	789624	19	270,85,82,157,117,117,99,237,147,134,126,163,259,152,64,171,133,76,194,	0,1058,1385,1909,3286,3621,4084,6433,7016,10311,11043,11396,12648,14491,14836,15077,15407,16002,16305,
#Partially deleted in new
chr17	7933116	7939703	chr17:7933116-7939703	0	+	7933116	7936408	789624	8	233,85,82,157,245,117,99,191,	0,1021,1348,1872,3121,3584,4047,6396,
#Partially deleted in new
chr17	7934528	7949578	chr17:7934528-7949578	0	+	7934528	7934979	789624	14	18,227,117,117,99,237,147,134,126,259,152,64,171,1092,	0,390,1837,2172,2635,4984,5567,8862,9594,11199,13042,13387,13628,13958,
#Deleted in new
chr17	7935675	7936796	chr17:7935675-7936796	0	+	7935675	7935675	8553170	2	807,96,	0,1025,
#Partially deleted in new
chr17	7937202	7947685	chr17:7937202-7947685	0	+	7937202	7937202	8553170	7	60,237,147,134,516,259,115,	0,2310,2893,6188,6920,8525,10368,
#Partially deleted in new
chr17	7937203	7943599	chr17:7937203-7943599	0	+	7937203	7937203	8553170	4	59,237,147,209,	0,2309,2892,6187,
#Partially deleted in new
chr17	7939689	7949918	chr17:7939689-7949918	0	+	7939689	7939689	8553170	11	60,147,134,126,163,259,152,64,171,651,534,	0,406,3701,4433,4786,6038,7881,8226,8467,8797,9695,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	7945330	7947722	chr17:7945330-7947722	0	+	7945330	7945330	8553170	2	656,152,	0,2240,
#Deleted in new
chr17	7947623	7949425	chr17:7947623-7949425	0	+	7947623	7949425	789624	6	99,64,171,133,53,41,	0,292,533,863,1461,1761,
#Partially deleted in new
chr17	7954867	7955622	chr17:7954867-7955622	7	+	7954867	7954867	16724991	2	99,331,	0,424,
#Partially deleted in new
chr17	8002593	8020339	chr17:8002593-8020339	3	+	8003047	8016530	0	20	141,730,305,352,85,103,102,81,207,157,150,149,164,193,175,99,95,86,112,212,	0,445,1258,3769,4466,4832,5337,6912,9550,9856,10509,11286,12007,12265,12734,13149,13333,13611,13849,17534,
#Deleted in new
chr17	8013326	8016378	chr17:8013326-8016378	3	-	8013326	8013326	8553170	1	3052,	0,
#Deleted in new
chr17	8016128	8016820	chr17:8016128-8016820	0	+	8016128	8016128	8553170	2	162,378,	0,314,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	8039016	8049134	chr17:8039016-8049134	3	+	8039155	8048565	0	14	286,220,82,123,104,173,147,204,87,170,122,101,171,749,	0,369,885,3352,3764,5812,6221,6466,7651,7890,8241,8547,8728,9369,
#Partially deleted in new
chr17	8039033	8048844	chr17:8039033-8048844	1	+	8039155	8048565	789624	14	269,220,82,123,104,173,147,204,87,170,86,101,171,459,	0,352,868,3335,3747,5795,6204,6449,7634,7873,8260,8530,8711,9352,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	8039039	8049110	chr17:8039039-8049110	1	+	8039155	8048565	0	13	263,220,82,123,104,173,147,204,170,122,101,171,725,	0,346,862,3329,3741,5789,6198,6443,7867,8218,8524,8705,9346,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	8039100	8049134	chr17:8039100-8049134	0	+	8039100	8039100	8553170	13	202,220,82,516,173,147,204,87,170,122,101,171,749,	0,285,801,3268,5728,6137,6382,7567,7806,8157,8463,8644,9285,
#Partially deleted in new
chr17	8039155	8048565	chr17:8039155-8048565	1	+	8039155	8048565	0	12	147,220,82,123,104,173,147,204,157,101,171,180,	0,230,746,3213,3625,5673,6082,6327,7751,8408,8589,9230,
#Partially deleted in new
chr17	8056224	8057621	chr17:8056224-8057621	3	-	8056224	8056224	8553170	2	467,50,	0,1347,
#Partially deleted in new
chr17	8063935	8072533	chr17:8063935-8072533	7	+	8063935	8063935	16724991	9	119,91,195,150,203,122,101,177,147,	0,189,3222,3930,5156,7452,7649,7843,8451,
#Partially deleted in new
chr17	8072635	8087703	chr17:8072635-8087703	1	-	8072770	8087442	789624	15	315,171,101,122,170,87,204,144,173,104,123,93,82,205,408,	0,512,1021,2959,3539,4021,4354,6760,7133,7599,8022,8248,8470,13380,14660,
#Partially deleted in new
chr17	8072635	8087716	chr17:8072635-8087716	3	-	8072770	8087442	8553170	15	315,171,101,122,170,87,204,144,173,104,123,93,82,205,421,	0,512,1021,2959,3539,4021,4354,6760,7133,7599,8022,8248,8470,13380,14660,
#Partially deleted in new
chr17	8072719	8079903	chr17:8072719-8079903	0	-	8072770	8079903	8553170	8	231,171,101,122,170,87,204,135,	0,428,937,2875,3455,3937,4270,7049,
#Deleted in new
chr17	8072780	8074295	chr17:8072780-8074295	0	-	8072780	8072780	8553170	4	170,171,101,77,	0,367,876,1438,
#Partially deleted in new
chr17	8073153	8079413	chr17:8073153-8079413	0	-	8073153	8073153	8553170	5	165,170,87,204,18,	0,3021,3503,3836,6242,
#Partially deleted in new
chr17	8076223	8080079	chr17:8076223-8080079	0	-	8076223	8076223	8553170	5	121,87,204,144,311,	0,433,766,3172,3545,
#Partially deleted in new
chr17	8076294	8080095	chr17:8076294-8080095	0	-	8076294	8076294	8553170	4	50,87,204,327,	0,362,695,3474,
#Deleted in new
chr17	8079481	8081565	chr17:8079481-8081565	3	+	8079481	8079481	8553170	2	43,1761,	0,323,
#Deleted in new
chr17	8088055	8088147	chr17:8088055-8088147	3	+	8088055	8088055	5263520	1	92,	0,
#Partially deleted in new
chr17	8095899	8118489	chr17:8095899-8118489	1	-	8096626	8118458	789624	15	907,171,101,122,170,87,204,144,173,104,126,120,82,205,646,	0,7423,8215,12568,13274,14016,14192,14485,15459,16193,18584,19038,19707,20876,21944,
#Partially deleted in new
chr17	8095900	8118513	chr17:8095900-8118513	3	-	8096626	8117990	789624	16	906,171,101,122,170,87,204,144,173,104,126,120,82,205,460,28,	0,7422,8214,12567,13273,14015,14191,14484,15458,16192,18583,19037,19706,20875,21943,22585,
#Partially deleted in new
chr17	8096248	8103515	chr17:8096248-8103515	0	-	8096248	8096248	8553170	2	558,193,	0,7074,
#Partially deleted in new
chr17	8096374	8119047	chr17:8096374-8119047	1	-	8096626	8118778	789624	16	432,171,101,122,170,87,204,144,173,104,126,120,82,205,460,352,	0,6948,7740,12093,12799,13541,13717,14010,14984,15718,18109,18563,19232,20401,21469,22321,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	8120589	8124084	chr17:8120589-8124084	1	-	8121570	8124084	789624	4	1448,88,96,42,	0,1753,2441,3453,
#Deleted in new
chr17	8121570	8124084	chr17:8121570-8124084	3	-	8121570	8124084	789624	4	452,88,96,42,	0,772,1460,2472,
#Deleted in new
chr17	8121803	8124092	chr17:8121803-8124092	0	-	8121803	8123337	789624	5	234,88,96,186,50,	0,539,1227,1516,2239,
#Partially deleted in new
chr17	8140471	8152435	chr17:8140471-8152435	3	-	8141067	8150706	0	23	869,151,190,187,611,243,180,131,172,106,132,109,154,107,79,143,52,202,122,155,99,414,99,	0,1333,1797,2177,2794,4279,5486,5900,6122,6425,6778,6998,7202,7525,7709,8172,8787,8990,9283,9499,9747,9960,11865,
#Partially deleted in new
chr17	8140476	8150832	chr17:8140476-8150832	1	-	8141067	8150706	789624	22	864,151,190,187,611,234,180,131,172,106,132,109,154,107,79,143,52,142,122,155,99,401,	0,1328,1792,2172,2789,4283,5481,5895,6117,6420,6773,6993,7197,7520,7704,8167,8782,8985,9278,9494,9742,9955,
#Partially deleted in new
chr17	8140799	8152344	chr17:8140799-8152344	0	-	8142821	8150706	789624	22	541,151,190,187,243,180,131,172,106,132,109,154,107,79,143,52,202,122,155,99,414,8,	0,1005,1469,1849,3951,5158,5572,5794,6097,6450,6670,6874,7197,7381,7844,8459,8662,8955,9171,9419,9632,11537,
#Deleted in new
chr17	8141215	8142191	chr17:8141215-8142191	0	-	8141215	8141215	8553170	2	125,387,	0,589,
#Deleted in new
chr17	8141232	8142470	chr17:8141232-8142470	0	-	8141232	8141232	8553170	3	108,151,202,	0,572,1036,
#Deleted in new
chr17	8142547	8143344	chr17:8142547-8143344	0	-	8142547	8142547	8553170	2	288,79,	0,718,
#Partially deleted in new
chr17	8143440	8146488	chr17:8143440-8146488	0	-	8143440	8143440	8553170	4	436,97,180,117,	0,1310,2517,2931,
#Deleted in new
chr17	8143756	8145170	chr17:8143756-8145170	0	-	8143756	8143756	8553170	2	120,420,	0,994,
#Partially deleted in new
chr17	8144054	8156360	chr17:8144054-8156360	1	-	8144583	8156354	0	18	939,180,131,172,106,132,109,154,107,79,143,52,202,122,155,99,179,54,	0,1903,2317,2539,2842,3195,3415,3619,3942,4126,4589,5204,5407,5700,5916,6164,6377,12252,
#Partially deleted in new
chr17	8144055	8156506	chr17:8144055-8156506	0	-	8146675	8150706	789624	16	938,131,172,132,109,154,107,79,143,52,202,122,155,99,414,200,	0,2316,2538,3194,3414,3618,3941,4125,4588,5203,5406,5699,5915,6163,6376,12251,
#Partially deleted in new
chr17	8144055	8146024	chr17:8144055-8146024	0	-	8144071	8146024	789624	3	213,243,67,	0,695,1902,
#Deleted in new
chr17	8144993	8145071	chr17:8144993-8145071	3	-	8144993	8144993	5263520	1	78,	0,
#Deleted in new
chr17	8146639	8147549	chr17:8146639-8147549	0	-	8146639	8146639	8553170	3	126,485,80,	0,257,830,
#Deleted in new
chr17	8146868	8147582	chr17:8146868-8147582	0	-	8146868	8146868	8553170	2	513,113,	0,601,
#Deleted in new
chr17	8147258	8148005	chr17:8147258-8148005	0	-	8147258	8147258	8553170	3	123,109,332,	0,211,415,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	8147547	8148989	chr17:8147547-8148989	0	-	8147547	8147547	8553170	5	31,154,107,79,346,	0,126,449,633,1096,
#Deleted in new
chr17	8149238	8152383	chr17:8149238-8152383	0	-	8149238	8149238	8553170	6	425,122,155,99,414,47,	0,516,732,980,1193,3098,
#Deleted in new
chr17	8149974	8152435	chr17:8149974-8152435	0	-	8149974	8152432	789624	4	151,99,179,99,	0,244,457,2362,
#Partially deleted in new
chr17	8150049	8156405	chr17:8150049-8156405	0	-	8150049	8150706	789624	3	76,414,99,	0,382,6257,
#Partially deleted in new
chr17	8150815	8162975	chr17:8150815-8162975	3	-	8150815	8162879	789624	5	30,52,159,121,98,	0,10657,10792,11433,12062,
#Deleted in new
chr17	8159148	8162975	chr17:8159148-8162975	3	-	8160854	8162879	0	5	1723,52,159,121,98,	0,2324,2459,3100,3729,
#Deleted in new
chr17	8160405	8163546	chr17:8160405-8163546	1	-	8161464	8161754	789624	4	1119,159,121,80,	0,1202,1843,3061,
#Deleted in new
chr17	8160818	8162932	chr17:8160818-8162932	1	-	8160854	8162451	789624	5	53,52,159,121,489,	0,654,789,1430,1625,
#Deleted in new
chr17	8161318	8162948	chr17:8161318-8162948	1	-	8161464	8162879	789624	4	206,159,121,71,	0,289,930,1559,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	8173236	8176373	chr17:8173236-8176373	1	-	8174251	8176286	789624	2	1036,174,	0,2963,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	8173741	8176373	chr17:8173741-8176373	1	-	8175688	8176286	789624	3	2116,68,174,	0,2217,2458,
#Partially deleted in new
chr17	8173966	8176374	chr17:8173966-8176374	3	-	8174202	8176286	789624	5	306,97,101,68,175,	0,553,1790,1992,2233,
#Partially deleted in new
chr17	8173998	8176388	chr17:8173998-8176388	1	-	8174202	8176286	789624	5	274,76,119,68,189,	0,542,1758,1960,2201,
#Partially deleted in new
chr17	8174000	8176399	chr17:8174000-8176399	1	-	8174202	8176286	789624	5	272,97,119,68,200,	0,519,1756,1958,2199,
#Partially deleted in new
chr17	8174002	8176316	chr17:8174002-8176316	1	-	8174202	8176286	789624	3	270,68,117,	0,1956,2197,
#Partially deleted in new
chr17	8174101	8176392	chr17:8174101-8176392	0	-	8174101	8174101	8553170	2	515,636,	0,1655,
#Partially deleted in new
chr17	8174170	8176387	chr17:8174170-8176387	0	-	8174170	8174170	8553170	3	102,97,631,	0,349,1586,
#Partially deleted in new
chr17	8174583	8176376	chr17:8174583-8176376	0	-	8174583	8174583	8553170	3	33,270,177,	0,1173,1616,
#Partially deleted in new
chr17	8176811	8182812	chr17:8176811-8182812	3	+	8176811	8176811	8553170	3	197,117,151,	0,4587,5850,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	8186944	8187004	chr17:8186944-8187004	3	+	8186944	8186944	5263520	1	60,	0,
#Deleted in new
chr17	8188332	8190907	chr17:8188332-8190907	3	-	8189066	8190140	789624	1	2575,	0,
#Deleted in new
chr17	8188932	8189688	chr17:8188932-8189688	3	+	8188932	8188932	8553170	1	756,	0,
#Deleted in new
chr17	8199122	8199437	chr17:8199122-8199437	7	-	8199122	8199122	16724991	1	315,	0,
#Partially deleted in new
chr17	8204732	8210582	chr17:8204732-8210582	1	-	8204870	8210224	0	9	312,175,149,139,195,55,103,73,53,	0,483,1758,2017,2443,2838,3005,5444,5797,
#Partially deleted in new
chr17	8204742	8210581	chr17:8204742-8210581	1	-	8204870	8207765	0	8	302,175,149,139,192,55,103,52,	0,473,1748,2007,2433,2828,2995,5787,
#Partially deleted in new
chr17	8204772	8210598	chr17:8204772-8210598	3	-	8204870	8210224	0	9	272,175,149,139,192,55,103,73,69,	0,443,1718,1977,2403,2798,2965,5404,5757,
#Partially deleted in new
chr17	8204858	8207367	chr17:8204858-8207367	0	-	8204870	8207367	789624	5	186,73,149,139,192,	0,459,1632,1891,2317,
#Partially deleted in new
chr17	8204870	8210224	chr17:8204870-8210224	1	-	8204870	8210224	0	8	174,175,149,185,50,55,103,48,	0,345,1620,1879,2447,2700,2867,5306,
#Partially deleted in new
chr17	8204901	8210247	chr17:8204901-8210247	0	-	8206523	8210224	789624	7	143,175,149,50,55,103,71,	0,314,1589,2416,2669,2836,5275,
#Partially deleted in new
chr17	8204960	8206698	chr17:8204960-8206698	0	-	8204960	8204960	8553170	3	84,175,208,	0,255,1530,
#Partially deleted in new
chr17	8205264	8210568	chr17:8205264-8210568	0	-	8205264	8207765	789624	7	126,149,139,195,55,164,39,	0,1226,1485,1911,2306,2473,5265,
#Partially deleted in new
chr17	8206490	8210584	chr17:8206490-8210584	0	-	8206490	8210224	789624	7	149,139,192,55,103,49,55,	0,259,685,1080,1247,3686,4039,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	8206492	8208225	chr17:8206492-8208225	0	-	8206492	8206492	8553170	4	147,50,55,488,	0,825,1078,1245,
#Partially deleted in new
chr17	8206518	8210559	chr17:8206518-8210559	0	-	8206518	8206518	8553170	6	121,628,55,103,73,30,	0,221,1052,1219,3658,4011,
#Partially deleted in new
chr17	8206537	8210254	chr17:8206537-8210254	0	-	8206537	8207765	789624	7	102,139,192,55,103,102,78,	0,212,638,1033,1200,3416,3639,
#Partially deleted in new
chr17	8207241	8210581	chr17:8207241-8210581	0	-	8207241	8207765	789624	4	126,55,164,52,	0,329,496,3288,
#Deleted in new
chr17	8209997	8210600	chr17:8209997-8210600	0	-	8209997	8209997	8553170	2	252,71,	0,532,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	8220641	8224043	chr17:8220641-8224043	3	-	8220641	8220641	789624	3	868,982,232,	0,1651,3170,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr17	8224820	8248095	chr17:8224820-8248095	3	-	8228179	8248036	0	23	3499,127,166,65,145,78,175,89,194,90,325,115,127,201,178,233,129,285,145,212,238,164,92,	0,3682,3906,4321,4481,5070,5473,5742,6455,6905,7082,7540,8085,9634,9928,10232,11010,11237,12554,13210,13571,18164,23183,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr17	8226874	8248042	chr17:8226874-8248042	0	-	8228847	8248036	0	22	1445,127,166,145,78,175,89,194,90,325,115,127,201,178,233,129,285,40,212,238,164,39,	0,1628,1852,2427,3016,3419,3688,4401,4851,5028,5486,6031,7580,7874,8178,8956,9183,10500,11156,11517,16110,21129,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr17	8226922	8248044	chr17:8226922-8248044	0	-	8235104	8248036	789624	23	1397,127,166,65,145,78,175,89,194,90,325,115,127,94,201,178,233,260,145,212,238,164,41,	0,1580,1804,2219,2379,2968,3371,3640,4353,4803,4980,5438,5983,6440,7532,7826,8130,9160,10452,11108,11469,16062,21081,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr17	8227935	8248041	chr17:8227935-8248041	0	-	8227935	8227935	8553170	23	384,127,166,65,145,78,175,89,194,90,325,115,127,148,201,178,233,129,285,145,212,238,38,	0,567,791,1206,1366,1955,2358,2627,3340,3790,3967,4425,4970,5373,6519,6813,7117,7895,8122,9439,10095,10456,20068,
#Deleted in new
chr17	8227981	8229405	chr17:8227981-8229405	0	-	8228179	8229405	789624	3	338,127,104,	0,521,1320,
#Partially deleted in new
chr17	8228548	8230397	chr17:8228548-8230397	0	-	8228548	8230397	789624	4	81,112,78,104,	0,786,1342,1745,
#Partially deleted in new
chr17	8228784	8231445	chr17:8228784-8231445	0	-	8228784	8228784	8553170	7	108,305,32,55,22,89,170,	0,357,1106,1509,1662,1778,2491,
#Partially deleted in new
chr17	8228826	8232183	chr17:8228826-8232183	0	-	8230618	8232183	789624	8	66,65,145,32,175,89,90,281,	0,315,475,1064,1467,1736,2899,3076,
#Partially deleted in new
chr17	8229357	8232648	chr17:8229357-8232648	0	-	8229357	8229357	8553170	7	89,578,89,194,90,325,288,	0,533,1205,1918,2368,2545,3003,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	8230267	8230933	chr17:8230267-8230933	0	-	8230267	8230267	8553170	2	201,371,	0,295,
#Partially deleted in new
chr17	8232711	8234768	chr17:8232711-8234768	0	-	8232711	8232711	8553170	3	321,201,20,	0,1743,2037,
#Partially deleted in new
chr17	8232911	8234802	chr17:8232911-8234802	0	-	8232911	8232911	8553170	2	121,348,	0,1543,
#Deleted in new
chr17	8234633	8235366	chr17:8234633-8235366	0	-	8234633	8234633	8553170	3	22,178,314,	0,115,419,
#Partially deleted in new
chr17	8238288	8243124	chr17:8238288-8243124	0	-	8238288	8238288	8553170	2	341,140,	0,4696,
#Partially deleted in new
chr17	8247617	8254286	chr17:8247617-8254286	0	+	8253937	8254286	789624	3	239,221,121,	0,6241,6548,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr17	8249285	8270485	chr17:8249285-8270485	3	+	8253937	8269264	789624	28	54,221,136,106,190,106,141,125,129,132,129,74,157,62,162,126,132,231,181,84,156,120,146,208,92,115,324,1532,	0,4573,4880,5741,6216,6519,6981,7238,7549,8521,8785,13634,13823,14289,14489,14926,15184,15609,16002,16270,16576,16948,17467,17742,18086,18265,19247,19668,
#Partially deleted in new
chr17	8249285	8269430	chr17:8249285-8269430	0	+	8253937	8255816	789624	26	54,221,136,106,106,382,129,132,129,74,157,62,162,126,132,231,181,84,156,120,146,208,92,115,324,477,	0,4573,4880,5741,6519,6981,7549,8521,8785,13634,13823,14289,14489,14926,15184,15609,16002,16270,16576,16948,17467,17742,18086,18265,19247,19668,
#Partially deleted in new
chr17	8249285	8255524	chr17:8249285-8255524	0	+	8253937	8255524	789624	5	54,238,136,106,23,	0,4556,4880,5741,6216,
#Partially deleted in new
chr17	8249341	8255058	chr17:8249341-8255058	0	+	8253937	8255058	789624	4	164,221,136,32,	0,4517,4824,5685,
#Partially deleted in new
chr17	8253937	8255816	chr17:8253937-8255816	1	+	8253937	8255816	789624	4	142,136,106,12,	0,228,1089,1867,
#Partially deleted in new
chr17	8262459	8264314	chr17:8262459-8264314	0	+	8262459	8262459	8553170	6	40,74,157,62,162,103,	0,460,649,1115,1315,1752,
#Partially deleted in new
chr17	8262919	8264267	chr17:8262919-8264267	0	+	8262919	8264267	789624	4	74,157,62,56,	0,189,655,1292,
#Partially deleted in new
chr17	8263260	8264641	chr17:8263260-8264641	0	+	8263260	8263260	8553170	5	5,62,162,126,172,	0,314,514,951,1209,
#Partially deleted in new
chr17	8265972	8267229	chr17:8265972-8267229	0	+	8265972	8266523	789624	4	45,120,398,202,	0,261,528,1055,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	8266005	8270491	chr17:8266005-8270491	0	+	8266005	8268996	789624	7	12,120,146,208,92,115,1959,	0,228,747,1022,1366,1545,2527,
#Partially deleted in new
chr17	8266271	8267229	chr17:8266271-8267229	0	+	8266271	8266271	8553170	2	82,477,	0,481,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	8277762	8278436	chr17:8277762-8278436	3	+	8277762	8277762	8553170	1	674,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	8287762	8295343	chr17:8287762-8295343	1	-	8289615	8294807	789624	7	670,70,131,135,153,66,911,	0,1811,2091,3079,3570,4760,6670,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	8287763	8294852	chr17:8287763-8294852	1	-	8289615	8294807	789624	6	1880,131,135,153,66,420,	0,2090,3078,3569,4759,6669,
#Deleted in new
chr17	8288496	8290092	chr17:8288496-8290092	3	+	8288788	8289936	0	5	369,117,157,86,280,	0,459,761,1006,1316,
#Deleted in new
chr17	8288653	8290090	chr17:8288653-8290090	1	+	8288788	8289592	0	4	212,117,157,588,	0,302,604,849,
#Deleted in new
chr17	8288670	8290092	chr17:8288670-8290092	1	+	8288788	8289818	0	4	195,117,157,280,	0,285,587,1142,
#Deleted in new
chr17	8288677	8290092	chr17:8288677-8290092	1	+	8288788	8289561	0	3	188,117,835,	0,278,580,
#Deleted in new
chr17	8288698	8289395	chr17:8288698-8289395	0	+	8288698	8288698	8553170	2	167,440,	0,257,
#Partially deleted in new
chr17	8288859	8294836	chr17:8288859-8294836	0	-	8289913	8294807	789624	8	538,70,131,76,135,153,66,404,	0,714,994,1743,1982,2473,3663,5573,
#Partially deleted in new
chr17	8288860	8294838	chr17:8288860-8294838	1	-	8289615	8294807	789624	7	580,70,131,135,153,66,406,	0,713,993,1981,2472,3662,5572,
#Deleted in new
chr17	8288884	8289941	chr17:8288884-8289941	0	+	8288884	8288884	8553170	3	188,157,439,	0,373,618,
#Partially deleted in new
chr17	8289615	8294807	chr17:8289615-8294807	0	-	8289913	8294807	789624	7	28,131,64,135,153,66,375,	0,238,999,1226,1717,2907,4817,
#Partially deleted in new
chr17	8290058	8295318	chr17:8290058-8295318	3	-	8290504	8294807	789624	5	620,135,153,66,886,	0,783,1274,2464,4374,
#Partially deleted in new
chr17	8296504	8297216	chr17:8296504-8297216	7	-	8296504	8296504	16724991	2	231,167,	0,545,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	8310240	8312388	chr17:8310240-8312388	0	+	8312039	8312388	789624	3	103,36,398,	0,587,1750,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	8310279	8314031	chr17:8310279-8314031	0	+	8310279	8310279	8553170	2	64,2041,	0,1711,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr17	8310282	8322516	chr17:8310282-8322516	3	+	8312039	8320993	789624	16	61,650,333,55,59,212,161,153,130,75,93,161,153,83,105,1675,	0,1708,2639,3218,4623,4783,5131,5472,5736,8104,8287,8467,8724,9029,9216,10559,
#Partially deleted in new
chr17	8310821	8322514	chr17:8310821-8322514	1	+	8312039	8320993	789624	16	42,650,333,55,59,212,161,153,130,75,93,161,153,83,105,1673,	0,1169,2100,2679,4084,4244,4592,4933,5197,7565,7748,7928,8185,8490,8677,10020,
#Deleted in new
chr17	8310821	8312943	chr17:8310821-8312943	0	+	8312039	8312943	789624	3	42,650,22,	0,1169,2100,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	8313040	8314042	chr17:8313040-8314042	0	+	8313040	8313562	789624	3	214,157,297,	0,460,705,
#Partially deleted in new
chr17	8313103	8322489	chr17:8313103-8322489	0	+	8313103	8320993	8553170	13	452,59,212,161,153,130,75,93,161,153,83,105,1648,	0,1802,1962,2310,2651,2915,5283,5466,5646,5903,6208,6395,7738,
#Deleted in new
chr17	8314868	8315574	chr17:8314868-8315574	0	+	8314868	8314868	8553170	3	96,212,161,	0,197,545,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	8318087	8318712	chr17:8318087-8318712	3	-	8318087	8318087	8553170	2	390,147,	0,478,
#Deleted in new
chr17	8318765	8319158	chr17:8318765-8319158	0	+	8318765	8318765	8553170	2	145,103,	0,290,
#Deleted in new
chr17	8329582	8329719	chr17:8329582-8329719	3	+	8329582	8329582	8553170	1	137,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	8337696	8338758	chr17:8337696-8338758	3	+	8337696	8337696	8553170	2	212,336,	0,726,
#Partially deleted in new
chr17	8339863	8346046	chr17:8339863-8346046	3	+	8340051	8345852	789624	3	642,135,379,	0,5479,5804,
#Partially deleted in new
chr17	8339869	8346045	chr17:8339869-8346045	1	+	8340051	8345852	789624	3	291,135,378,	0,5473,5798,
#Partially deleted in new
chr17	8339892	8346048	chr17:8339892-8346048	0	+	8340051	8344922	789624	4	268,170,135,381,	0,4980,5450,5775,
#Partially deleted in new
chr17	8340457	8346041	chr17:8340457-8346041	0	+	8340457	8344922	789624	4	48,170,135,374,	0,4415,4885,5210,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	8356901	8376681	chr17:8356901-8376681	1	-	8369133	8371432	8553170	6	366,1282,186,482,80,642,	0,12203,14407,14698,18998,19138,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	8365562	8373816	chr17:8365562-8373816	1	+	8365562	8365562	8553170	3	159,46,326,	0,1600,7928,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	8365568	8376147	chr17:8365568-8376147	3	+	8365568	8365568	8553170	2	153,426,	0,10153,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	8368636	8376711	chr17:8368636-8376711	1	-	8369133	8370366	789624	2	1750,812,	0,7263,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	8368637	8383187	chr17:8368637-8383187	3	-	8376089	8382310	789624	6	1749,773,205,141,173,46,	0,2671,7262,11158,13505,14504,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	8368654	8371540	chr17:8368654-8371540	1	-	8369133	8371534	789624	2	1732,232,	0,2654,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	8368709	8376658	chr17:8368709-8376658	3	-	8369133	8371534	789624	3	1677,773,759,	0,2599,7190,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	8368979	8376667	chr17:8368979-8376667	1	-	8369133	8371432	789624	4	1407,186,209,768,	0,2329,2620,6920,
#Partially deleted in new
chr17	8377515	8383250	chr17:8377515-8383250	3	-	8377563	8382310	0	4	177,141,173,94,	0,2280,4627,5641,
#Partially deleted in new
chr17	8377515	8383193	chr17:8377515-8383193	1	-	8377563	8382310	8553170	4	177,141,173,37,	0,2280,4627,5641,
#Partially deleted in new
chr17	8377520	8383164	chr17:8377520-8383164	1	-	8377563	8382310	0	4	172,141,173,384,	0,2275,4622,5260,
#Partially deleted in new
chr17	8377520	8382315	chr17:8377520-8382315	0	-	8380679	8382310	789624	4	172,141,117,173,	0,2275,3066,4622,
#Partially deleted in new
chr17	8377522	8383213	chr17:8377522-8383213	1	-	8377563	8382310	0	4	170,141,196,57,	0,2273,4620,5634,
#Partially deleted in new
chr17	8377525	8380084	chr17:8377525-8380084	0	-	8377525	8377525	8553170	2	167,289,	0,2270,
#Partially deleted in new
chr17	8377537	8379936	chr17:8377537-8379936	0	-	8377673	8379936	789624	2	187,141,	0,2258,
#Partially deleted in new
chr17	8377543	8382309	chr17:8377543-8382309	0	-	8377579	8382309	789624	3	135,141,167,	0,2252,4599,
#Partially deleted in new
chr17	8377548	8383166	chr17:8377548-8383166	1	-	8377563	8382310	0	4	144,141,173,305,	0,2247,4594,5313,
#Partially deleted in new
chr17	8377609	8383192	chr17:8377609-8383192	0	-	8377609	8377609	8553170	4	83,141,93,36,	0,2186,4388,5547,
#Partially deleted in new
chr17	8377678	8383009	chr17:8377678-8383009	0	-	8377678	8382310	789624	4	14,141,173,235,	0,2117,4464,5096,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	8379144	8383193	chr17:8379144-8383193	1	-	8379771	8382310	789624	3	792,173,37,	0,2998,4012,
#Partially deleted in new
chr17	8379814	8382554	chr17:8379814-8382554	0	-	8379814	8379814	8553170	2	122,412,	0,2328,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	8381783	8383193	chr17:8381783-8383193	0	-	8381783	8381783	8553170	2	532,37,	0,1373,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	8390703	8393489	chr17:8390703-8393489	1	-	8392798	8393461	789624	1	2786,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	8390708	8397826	chr17:8390708-8397826	3	-	8392798	8393461	789624	3	2778,152,132,	0,3469,6986,
#Partially deleted in new
chr17	8413130	8448597	chr17:8413130-8448597	0	+	8444271	8448597	789624	5	139,98,154,149,48,	0,31129,32580,33623,35419,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	8413131	8432167	chr17:8413131-8432167	0	+	8413131	8413131	8553170	3	138,158,269,	0,18070,18767,
#Partially deleted in new
chr17	8413194	8446884	chr17:8413194-8446884	0	+	8444271	8445736	789624	5	75,98,119,154,131,	0,31065,31429,32516,33559,
#Partially deleted in new
chr17	8435851	8448635	chr17:8435851-8448635	0	+	8444271	8448635	789624	5	68,98,154,149,86,	0,8408,9859,10902,12698,
#Partially deleted in new
chr17	8435860	8468160	chr17:8435860-8468160	3	+	8444271	8467023	0	9	185,98,154,149,137,174,92,152,1231,	0,8399,9850,10893,12689,14919,18935,24148,31069,
#Partially deleted in new
chr17	8435860	8446780	chr17:8435860-8446780	0	+	8435860	8435860	8553170	5	185,98,87,154,27,	0,8399,9093,9850,10893,
#Partially deleted in new
chr17	8435893	8467269	chr17:8435893-8467269	1	+	8444271	8467237	789624	4	152,98,85,119,	0,8366,9817,31257,
#Partially deleted in new
chr17	8435899	8468160	chr17:8435899-8468160	1	+	8444271	8466947	789624	8	146,98,154,149,137,174,92,1231,	0,8360,9811,10854,12650,14880,18896,31030,
#Partially deleted in new
chr17	8435907	8467658	chr17:8435907-8467658	1	+	8444271	8466937	0	10	138,98,154,149,137,174,92,152,35,729,	0,8352,9803,10846,12642,14872,18888,24101,27412,31022,
#Partially deleted in new
chr17	8435913	8445724	chr17:8435913-8445724	0	+	8444271	8445724	789624	3	132,431,14,	0,8013,9797,
#Partially deleted in new
chr17	8435921	8445840	chr17:8435921-8445840	0	+	8444271	8445840	789624	4	124,250,98,130,	0,8005,8338,9789,
#Partially deleted in new
chr17	8435926	8446045	chr17:8435926-8446045	0	+	8435926	8435926	8553170	3	119,98,335,	0,8333,9784,
#Partially deleted in new
chr17	8436033	8445747	chr17:8436033-8445747	0	+	8436033	8436033	8553170	4	12,431,87,37,	0,7893,8920,9677,
#Partially deleted in new
chr17	8436093	8445801	chr17:8436093-8445801	0	+	8444271	8445801	789624	3	601,98,91,	0,8166,9617,
#Partially deleted in new
chr17	8436650	8448577	chr17:8436650-8448577	0	+	8436650	8436650	8553170	6	44,98,87,154,149,28,	0,7609,8303,9060,10103,11899,
#Partially deleted in new
chr17	8448603	8461384	chr17:8448603-8461384	0	+	8448603	8461224	789624	5	83,174,92,152,248,	0,2176,6192,11405,12533,
#Partially deleted in new
chr17	8450780	8490411	chr17:8450780-8490411	0	+	8450780	8490411	789624	4	173,92,152,165,	0,4015,9228,39466,
#Deleted in new
chr17	8462776	8468153	chr17:8462776-8468153	0	+	8462776	8462776	8553170	2	578,1224,	0,4153,
#Deleted in new
chr17	8464235	8468162	chr17:8464235-8468162	0	+	8464235	8464235	8553170	1	3927,	0,
#Partially deleted in new
chr17	8474204	8630761	chr17:8474204-8630761	1	-	8475803	8623246	0	43	1744,173,109,209,124,89,129,162,213,213,249,153,105,207,145,213,172,124,138,207,132,109,161,70,122,194,63,115,174,174,153,119,96,144,99,64,93,30,103,28,157,376,108,	0,2671,4133,5905,6197,7117,9933,13228,16135,18092,18571,19528,20932,25065,26621,30489,32113,34349,35607,38246,39333,39581,44426,44676,46673,46887,56418,61182,61553,67902,71243,72339,74108,74439,77841,79750,95515,102438,103031,114876,130621,148697,156449,
#Partially deleted in new
chr17	8474206	8630761	chr17:8474206-8630761	1	-	8475803	8623246	0	42	1742,173,109,209,124,89,129,162,213,213,249,153,105,207,145,213,172,124,138,207,132,109,161,70,122,194,115,174,174,153,119,96,144,99,64,93,27,103,28,157,376,108,	0,2669,4131,5903,6195,7115,9931,13226,16133,18090,18569,19526,20930,25063,26619,30487,32111,34347,35605,38244,39331,39579,44424,44674,46671,46885,61180,61551,67900,71241,72337,74106,74437,77839,79748,95513,102436,103029,114874,130619,148695,156447,
#Partially deleted in new
chr17	8474211	8630761	chr17:8474211-8630761	3	-	8475803	8623246	0	41	1737,173,109,209,124,89,129,162,213,213,249,153,105,207,145,213,172,124,138,207,132,109,161,70,122,194,115,174,174,153,119,96,144,99,64,93,103,28,157,376,108,	0,2664,4126,5898,6190,7110,9926,13221,16128,18085,18564,19521,20925,25058,26614,30482,32106,34342,35600,38239,39326,39574,44419,44669,46666,46880,61175,61546,67895,71236,72332,74101,74432,77834,79743,95508,103024,114869,130614,148690,156442,
#Partially deleted in new
chr17	8478311	8481445	chr17:8478311-8481445	0	-	8478311	8478311	8553170	4	135,209,124,124,	0,1798,2090,3010,
#Partially deleted in new
chr17	8492652	8493898	chr17:8492652-8493898	0	-	8492652	8492652	8553170	2	372,166,	0,1080,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	8505928	8509925	chr17:8505928-8509925	0	-	8505928	8505928	8553170	3	561,124,114,	0,2625,3883,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	8511124	8511188	chr17:8511124-8511188	3	+	8511124	8511124	8553170	1	64,	0,
#Deleted in new
chr17	8520923	8521519	chr17:8520923-8521519	0	-	8520923	8520923	8553170	2	76,428,	0,168,
#Partially deleted in new
chr17	8542049	8545533	chr17:8542049-8545533	0	-	8542049	8542049	8553170	2	231,86,	0,3398,
#Partially deleted in new
chr17	8546625	8554289	chr17:8546625-8554289	0	-	8546625	8546625	8553170	5	37,96,144,99,335,	0,1687,2018,5420,7329,
#Partially deleted in new
chr17	8553927	8604893	chr17:8553927-8604893	0	-	8553927	8553927	8553170	5	91,93,103,28,68,	0,15792,23308,35153,50898,
#Deleted in new
chr17	8560470	8560962	chr17:8560470-8560962	7	+	8560470	8560470	16724991	1	492,	0,
#Deleted in new
chr17	8561229	8561576	chr17:8561229-8561576	7	+	8561229	8561229	16724991	1	347,	0,
#Partially deleted in new
chr17	8577305	8630717	chr17:8577305-8630717	0	-	8577305	8623246	789624	6	33,28,157,376,74,64,	0,11775,27520,45596,46118,53348,
#Partially deleted in new
chr17	8729933	8744836	chr17:8729933-8744836	3	-	8730129	8744609	789624	7	274,159,222,198,105,106,310,	0,5162,5456,11540,13692,14145,14593,
#Partially deleted in new
chr17	8729949	8744787	chr17:8729949-8744787	1	-	8730129	8744609	789624	6	258,159,198,105,106,261,	0,5146,11524,13676,14129,14577,
#Deleted in new
chr17	8744573	8745219	chr17:8744573-8745219	0	-	8744573	8744609	789624	2	147,391,	0,255,
#Partially deleted in new
chr17	8753105	8758559	chr17:8753105-8758559	3	-	8753137	8758382	789624	6	92,169,86,59,231,286,	0,215,2414,3272,4156,5168,
#Partially deleted in new
chr17	8753105	8758559	chr17:8753105-8758559	0	-	8757480	8758382	789624	6	92,169,86,59,231,291,	0,215,2414,3272,4156,5163,
#Partially deleted in new
chr17	8755384	8757387	chr17:8755384-8757387	0	-	8755515	8757387	789624	3	221,59,126,	0,993,1877,
#Deleted in new
chr17	8797161	8799349	chr17:8797161-8799349	3	-	8797359	8799120	789624	1	2188,	0,
#Partially deleted in new
chr17	8802722	8867677	chr17:8802722-8867677	0	-	8838449	8849794	789624	20	707,141,113,116,91,71,91,111,123,79,424,87,184,70,133,53,360,84,104,149,	0,939,1318,16360,19123,19864,20273,20664,24449,25389,25844,26983,32550,33824,34068,35096,35573,36891,47059,64806,
#Partially deleted in new
chr17	8802736	8867660	chr17:8802736-8867660	0	-	8838449	8849794	789624	20	693,113,116,91,71,91,111,123,79,424,87,157,184,170,133,69,360,84,104,132,	0,1304,16346,19109,19850,20259,20650,24435,25375,25830,26969,30152,32536,33810,34054,35066,35559,36877,47045,64792,
#Partially deleted in new
chr17	8802736	8867677	chr17:8802736-8867677	3	-	8803272	8849794	789624	20	693,113,116,91,71,91,111,123,79,424,87,157,184,70,133,69,92,84,104,149,	0,1304,16346,19109,19850,20259,20650,24435,25375,25830,26969,30152,32536,33810,34054,35066,35827,36877,47045,64792,
#Partially deleted in new
chr17	8803272	8849794	chr17:8803272-8849794	1	-	8803272	8849794	789624	19	157,113,116,91,71,91,111,123,79,424,87,157,184,70,133,69,92,84,13,	0,768,15810,18573,19314,19723,20114,23899,24839,25294,26433,29616,32000,33274,33518,34530,35291,36341,46509,
#Partially deleted in new
chr17	8878910	8965703	chr17:8878910-8965703	0	-	8889972	8911494	789624	18	1876,113,83,94,77,94,129,126,163,721,84,154,70,139,69,101,116,108,	0,1994,2719,2877,5796,7318,7566,8185,8610,9260,10228,11062,14675,25866,26758,30163,32481,86685,
#Partially deleted in new
chr17	8878916	8965712	chr17:8878916-8965712	3	-	8880638	8911494	789624	19	1870,113,83,94,77,94,129,126,163,721,84,154,175,70,139,69,101,116,117,	0,1988,2713,2871,5790,7312,7560,8179,8604,9254,10222,11056,11821,14669,25860,26752,30157,32475,86679,
#Partially deleted in new
chr17	8878918	8965712	chr17:8878918-8965712	1	-	8880638	8888628	789624	18	1868,113,83,94,77,94,129,126,163,721,84,175,70,139,69,101,116,117,	0,1986,2711,2869,5788,7310,7558,8177,8602,9252,10220,11819,14667,25858,26750,30155,32473,86677,
#Partially deleted in new
chr17	8878918	8965712	chr17:8878918-8965712	1	-	8880638	8888628	789624	18	1868,113,83,94,77,94,129,126,163,721,84,154,175,70,139,69,101,117,	0,1986,2711,2869,5788,7310,7558,8177,8602,9252,10220,11054,11819,14667,25858,26750,30155,86677,
#Partially deleted in new
chr17	8878918	8965712	chr17:8878918-8965712	1	-	8880638	8888628	789624	18	1868,113,83,94,77,94,129,126,163,721,84,154,70,139,69,101,116,117,	0,1986,2711,2869,5788,7310,7558,8177,8602,9252,10220,11054,14667,25858,26750,30155,32473,86677,
#Partially deleted in new
chr17	8880095	8912517	chr17:8880095-8912517	1	-	8880638	8911494	789624	19	691,113,83,94,77,94,129,126,163,721,84,154,175,70,139,69,101,116,54,	0,809,1534,1692,4611,6133,6381,7000,7425,8075,9043,9877,10642,13490,24681,25573,28978,31296,32368,
#Deleted in new
chr17	8880463	8881869	chr17:8880463-8881869	0	-	8880900	8881869	789624	3	554,83,82,	0,1166,1324,
#Deleted in new
chr17	8880577	8882508	chr17:8880577-8882508	0	-	8880577	8880577	8553170	4	209,113,83,721,	0,327,1052,1210,
#Partially deleted in new
chr17	8880638	8965707	chr17:8880638-8965707	0	-	8880638	8880638	8553170	18	148,113,252,77,94,126,126,163,721,84,154,175,70,139,69,101,116,112,	0,266,991,4068,5590,5838,6457,6882,7532,8500,9334,10099,12947,24138,25030,28435,30753,84957,
#Partially deleted in new
chr17	8880638	8911507	chr17:8880638-8911507	1	-	8880638	8911494	789624	18	148,113,83,94,77,94,126,126,163,721,84,154,175,70,139,69,101,116,	0,266,991,1149,4068,5590,5838,6457,6882,7532,8500,9334,10099,12947,24138,25030,28435,30753,
#Partially deleted in new
chr17	8880640	8885086	chr17:8880640-8885086	0	-	8880640	8880640	8553170	6	146,113,83,94,77,167,	0,264,989,1147,4066,4279,
#Partially deleted in new
chr17	8880650	8887270	chr17:8880650-8887270	0	-	8880650	8880650	8553170	8	136,113,83,94,77,94,129,175,	0,254,979,1137,4056,5578,5826,6445,
#Partially deleted in new
chr17	8887426	8888513	chr17:8887426-8888513	0	-	8887426	8887426	8553170	2	257,343,	0,744,
#Partially deleted in new
chr17	8888637	8893908	chr17:8888637-8893908	0	-	8888637	8888637	8553170	6	254,84,154,175,70,130,	0,501,1335,2100,4948,5141,
#Partially deleted in new
chr17	8888740	8911512	chr17:8888740-8911512	0	-	8888740	8888740	8553170	9	213,84,154,175,70,139,69,101,121,	0,398,1232,1997,4845,16036,16928,20333,22651,
#Partially deleted in new
chr17	8888740	8965615	chr17:8888740-8965615	0	-	8888740	8888740	8553170	9	151,84,175,70,139,69,101,116,20,	0,398,1997,4845,16036,16928,20333,22651,76855,
#Partially deleted in new
chr17	8888822	8893650	chr17:8888822-8893650	0	-	8888822	8888822	8553170	4	69,84,175,65,	0,316,1915,4763,
#Partially deleted in new
chr17	8890818	8965712	chr17:8890818-8965712	0	-	8890818	8890818	8553170	6	94,70,139,69,101,117,	0,2767,13958,14850,18255,74777,
#Partially deleted in new
chr17	8909143	8911988	chr17:8909143-8911988	0	-	8909143	8911494	789624	2	31,597,	0,2248,
#Partially deleted in new
chr17	8915699	8965707	chr17:8915699-8965707	0	-	8915699	8915699	8553170	2	1148,112,	0,49896,
#Partially deleted in new
chr17	8965895	8967070	chr17:8965895-8967070	3	+	8965895	8965895	8553170	2	98,304,	0,871,
#Partially deleted in new
chr17	8967522	8976995	chr17:8967522-8976995	3	+	8967522	8967522	8553170	2	319,238,	0,9235,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	9021541	9244000	chr17:9021541-9244000	3	+	9022373	9239968	0	7	44,1081,189,150,54,75,4361,	0,769,141271,158265,161374,199626,218098,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	9162934	9183676	chr17:9162934-9183676	0	+	9162934	9183438	789624	4	67,150,54,429,	0,16872,19981,20313,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	9171067	9179118	chr17:9171067-9179118	3	-	9171067	9171067	789624	4	775,88,4619,190,	0,1726,2140,7861,
#Deleted in new
chr17	9244665	9244897	chr17:9244665-9244897	3	-	9244665	9244665	8553170	1	232,	0,
#Partially deleted in new
chr17	9250470	9576236	chr17:9250470-9576236	3	-	9250577	9575808	789624	8	175,102,93,125,111,95,100,445,	0,128081,241358,254567,294701,306963,317900,325321,
#Partially deleted in new
chr17	9250471	9575835	chr17:9250471-9575835	0	-	9505144	9575808	789624	6	174,102,93,125,100,44,	0,128080,241357,254566,317899,325320,
#Partially deleted in new
chr17	9250473	9437889	chr17:9250473-9437889	0	-	9250473	9250473	8553170	3	172,102,93,	0,128078,187323,
#Partially deleted in new
chr17	9250486	9273434	chr17:9250486-9273434	0	-	9250486	9250486	8553170	2	159,213,	0,22735,
#Partially deleted in new
chr17	9250486	9575837	chr17:9250486-9575837	1	-	9250577	9505152	789624	7	159,102,93,125,111,95,46,	0,128065,241342,254551,294685,306947,325305,
#Partially deleted in new
chr17	9250506	9575811	chr17:9250506-9575811	0	-	9491882	9575808	789624	5	139,102,93,100,20,	0,128045,241322,317864,325285,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	9283173	9305651	chr17:9283173-9305651	3	+	9283173	9283173	8553170	2	101,158,	0,22320,
#Partially deleted in new
chr17	9377888	9491865	chr17:9377888-9491865	0	-	9377888	9377888	8553170	2	765,37,	0,113940,
#Partially deleted in new
chr17	9452196	9470014	chr17:9452196-9470014	3	+	9452196	9452196	8553170	5	119,75,120,145,256,	0,234,9015,16909,17562,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	9464741	9467422	chr17:9464741-9467422	3	+	9464741	9464741	8553170	2	124,389,	0,2292,
#Partially deleted in new
chr17	9505147	9576591	chr17:9505147-9576591	0	-	9505147	9575808	789624	6	15,111,95,100,121,52,	0,40024,52286,63223,70644,71392,
#Partially deleted in new
chr17	9540679	9557510	chr17:9540679-9557510	0	-	9540679	9540679	8553170	3	105,111,77,	0,4492,16754,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	9547297	9548541	chr17:9547297-9548541	3	+	9547297	9547297	8553170	2	130,105,	0,1139,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	9552798	9575820	chr17:9552798-9575820	0	-	9552798	9552798	8553170	4	425,95,100,29,	0,4635,15572,22993,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	9553322	9555696	chr17:9553322-9555696	3	-	9553322	9553322	8553170	1	2374,	0,
#Partially deleted in new
chr17	9556896	9568458	chr17:9556896-9568458	0	-	9556896	9556896	8553170	2	632,88,	0,11474,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	9568404	9569942	chr17:9568404-9569942	0	-	9568404	9568404	8553170	2	66,445,	0,1093,
#Partially deleted in new
chr17	9576626	9643459	chr17:9576626-9643459	3	+	9576695	9643198	789624	14	139,200,137,129,100,117,101,171,149,146,152,103,112,437,	0,9146,10071,17566,21607,23440,31492,35682,52045,56261,58778,61982,65097,66396,
#Partially deleted in new
chr17	9576626	9643382	chr17:9576626-9643382	1	+	9576695	9643198	789624	13	139,133,129,100,117,101,171,149,146,152,103,112,360,	0,10075,17566,21607,23440,31492,35682,52045,56261,58778,61982,65097,66396,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	9576641	9598314	chr17:9576641-9598314	0	+	9576695	9586723	789624	5	124,137,129,110,81,	0,10056,17551,20870,21592,
#Partially deleted in new
chr17	9576643	9612357	chr17:9576643-9612357	0	+	9576695	9598310	789624	6	122,100,117,101,52,49,	0,21590,23423,31475,33647,35665,
#Partially deleted in new
chr17	9576669	9600183	chr17:9576669-9600183	0	+	9576695	9586723	789624	5	96,137,129,100,117,	0,10028,17523,21564,23397,
#Partially deleted in new
chr17	9576669	9643385	chr17:9576669-9643385	0	+	9576695	9584240	789624	15	96,190,200,137,129,100,117,101,171,149,146,152,103,112,363,	0,7512,9103,10028,17523,21564,23397,31449,35639,52002,56218,58735,61939,65054,66353,
#Partially deleted in new
chr17	9576681	9594486	chr17:9576681-9594486	1	+	9576695	9586815	789624	4	84,200,133,294,	0,9091,10020,17511,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	9585905	9598569	chr17:9585905-9598569	0	+	9585905	9585905	8553170	4	67,137,129,336,	0,792,8287,12328,
#Deleted in new
chr17	9589901	9590482	chr17:9589901-9590482	7	-	9589901	9589901	16724991	1	581,	0,
#Partially deleted in new
chr17	9632965	9639145	chr17:9632965-9639145	0	+	9632965	9632965	8553170	4	68,152,103,132,	0,2439,5643,6048,
#Partially deleted in new
chr17	9635430	9643390	chr17:9635430-9643390	0	+	9635430	9643073	789624	3	126,103,368,	0,3178,7592,
#Partially deleted in new
chr17	9638767	9645325	chr17:9638767-9645325	3	-	9638767	9638767	8553170	2	122,90,	0,6468,
#Partially deleted in new
chr17	9644697	9729101	chr17:9644697-9729101	0	+	9644697	9644697	8553170	15	645,132,104,93,136,136,136,112,104,78,127,349,159,165,1148,	0,11705,21950,30193,32048,35533,38125,42100,48429,55474,56421,56654,65258,67270,83256,
#Partially deleted in new
chr17	9645536	9729691	chr17:9645536-9729691	3	+	9645632	9728990	789624	15	600,132,104,93,136,136,136,112,104,78,127,349,159,165,1738,	0,10866,21111,29354,31209,34694,37286,41261,47590,54635,55582,55815,64419,66431,82417,
#Partially deleted in new
chr17	9645536	9729037	chr17:9645536-9729037	1	+	9645632	9728990	789624	15	600,132,104,93,136,136,136,112,104,78,127,334,159,165,1084,	0,10866,21111,29354,31209,34694,37286,41261,47590,54635,55582,55815,64419,66431,82417,
#Partially deleted in new
chr17	9647019	9647660	chr17:9647019-9647660	3	-	9647019	9647019	8553170	2	38,157,	0,484,
#Partially deleted in new
chr17	9656435	9729684	chr17:9656435-9729684	0	+	9656435	9728990	789624	13	99,93,136,136,136,112,104,78,127,349,159,165,1731,	0,18455,20310,23795,26387,30362,36691,43736,44683,44916,53520,55532,71518,
#Partially deleted in new
chr17	9669705	9686863	chr17:9669705-9686863	0	+	9669705	9669705	8553170	6	144,93,136,136,136,66,	0,5185,7040,10525,13117,17092,
#Partially deleted in new
chr17	9701114	9729684	chr17:9701114-9729684	0	+	9701114	9728990	789624	4	586,159,165,1731,	0,8841,10853,26839,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	9764187	9805073	chr17:9764187-9805073	3	+	9764187	9764187	8553170	4	144,65,71,1291,	0,18731,20991,39595,
#Partially deleted in new
chr17	9771433	9791297	chr17:9771433-9791297	3	-	9771487	9791284	789624	6	263,156,93,214,113,167,	0,1333,5759,8391,10048,19697,
#Partially deleted in new
chr17	9771433	9779921	chr17:9771433-9779921	0	-	9771487	9779921	789624	3	263,93,97,	0,5759,8391,
#Partially deleted in new
chr17	9771452	9791297	chr17:9771452-9791297	1	-	9771487	9791284	789624	6	244,156,93,211,113,167,	0,1314,5740,8372,10029,19678,
#Partially deleted in new
chr17	9791226	9808855	chr17:9791226-9808855	3	-	9791226	9791226	8553170	3	64,112,26,	0,16263,17603,
#Partially deleted in new
chr17	9802385	9822071	chr17:9802385-9822071	3	-	9802385	9822071	789624	5	259,112,153,48,310,	0,5104,6444,8185,19376,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	9805442	9811047	chr17:9805442-9811047	3	+	9805442	9805442	8553170	3	186,451,2247,	0,2018,3358,
#Partially deleted in new
chr17	9822205	9890034	chr17:9822205-9890034	1	+	9854530	9889705	789624	13	80,88,105,122,107,154,160,61,70,89,139,42,665,	0,11601,14165,20289,32289,35217,37736,38933,39815,48541,58172,65726,67164,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	9825550	9892102	chr17:9825550-9892102	3	+	9826063	9889705	789624	13	702,88,105,122,107,154,160,61,70,89,139,42,2733,	0,8256,10820,16944,28944,31872,34391,35588,36470,45196,54827,62381,63819,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	9825903	9866977	chr17:9825903-9866977	0	+	9826063	9834542	789624	11	349,88,246,105,122,107,154,160,61,70,1144,	0,7903,8634,10467,16591,28591,31519,34038,35235,36117,39930,
#Partially deleted in new
chr17	9842484	9860071	chr17:9842484-9860071	0	+	9854530	9860071	789624	4	132,107,154,130,	0,12010,14938,17457,
#Deleted in new
chr17	9852747	9853306	chr17:9852747-9853306	7	-	9852747	9852747	16724991	1	559,	0,
#Partially deleted in new
chr17	9896319	9905621	chr17:9896319-9905621	3	-	9898094	9905180	0	3	1885,112,822,	0,4669,8480,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	9897709	9901202	chr17:9897709-9901202	0	-	9897709	9897709	8553170	2	495,214,	0,3279,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	9910608	10114553	chr17:9910608-10114553	1	-	9917227	10039744	0	15	6733,99,80,124,129,79,75,116,90,54,86,81,121,54,112,	0,7392,9017,14867,16032,23557,29517,32512,36285,48593,59068,71195,109168,129133,203833,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	9910608	10026285	chr17:9910608-10026285	1	-	9917227	10019888	0	14	6733,99,80,124,129,79,75,116,90,54,86,81,121,136,	0,7392,9017,14867,16032,23557,29517,32512,36285,48593,59068,71195,109168,115541,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	9913849	10198551	chr17:9913849-10198551	3	-	9917227	10198390	0	14	3492,99,80,124,129,79,75,116,90,54,86,81,121,344,	0,4151,5776,11626,12791,20316,26276,29271,33044,45352,55827,67954,105927,284358,
#Partially deleted in new
chr17	9915254	10036747	chr17:9915254-10036747	1	-	9917227	10036436	0	14	2087,99,80,124,129,79,75,116,90,54,86,81,121,314,	0,2746,4371,10221,11386,18911,24871,27866,31639,43947,54422,66549,104522,121179,
#Partially deleted in new
chr17	9915977	9959462	chr17:9915977-9959462	1	-	9917227	9959306	0	10	1364,99,80,124,129,79,75,116,90,261,	0,2023,3648,9498,10663,18188,24148,27143,30916,43224,
#Partially deleted in new
chr17	9916805	9959462	chr17:9916805-9959462	1	-	9916965	9959306	789624	3	202,90,261,	0,30088,42396,
#Partially deleted in new
chr17	9916835	10020142	chr17:9916835-10020142	1	-	9917227	10019888	0	14	506,99,80,124,129,79,75,116,90,54,86,81,121,159,	0,1165,2790,8640,9805,17330,23290,26285,30058,42366,52841,64968,102941,103148,
#Partially deleted in new
chr17	9916989	10026285	chr17:9916989-10026285	1	-	9917227	10019888	789624	7	352,99,54,86,81,121,136,	0,1011,42212,52687,64814,102787,109160,
#Partially deleted in new
chr17	9917052	10020002	chr17:9917052-10020002	1	-	9917227	10019888	0	13	289,99,80,124,129,79,75,116,90,54,86,81,226,	0,948,2573,8423,9588,17113,23073,26068,29841,42149,52624,64751,102724,
#Partially deleted in new
chr17	9917085	9924785	chr17:9917085-9924785	0	-	9917085	9917085	8553170	4	256,99,80,119,	0,915,2540,7581,
#Partially deleted in new
chr17	9917167	9926994	chr17:9917167-9926994	0	-	9917167	9917167	8553170	5	174,99,80,124,354,	0,833,2458,8308,9473,
#Partially deleted in new
chr17	9926670	9959003	chr17:9926670-9959003	0	-	9926670	9926670	8553170	6	99,79,75,116,90,79,	0,7495,13455,16450,20223,32254,
#Partially deleted in new
chr17	9926729	9959495	chr17:9926729-9959495	0	-	9926729	9926729	8553170	7	40,79,75,116,90,54,113,	0,7436,13396,16391,20164,32472,32653,
#Partially deleted in new
chr17	9943120	10036701	chr17:9943120-10036701	0	-	9943120	9943120	8553170	3	116,90,268,	0,3773,93313,
#Partially deleted in new
chr17	9943120	10036537	chr17:9943120-10036537	0	-	9943120	10019888	789624	8	116,90,54,86,81,121,80,104,	0,3773,16081,26556,38683,76656,83899,93313,
#Partially deleted in new
chr17	9943208	10036662	chr17:9943208-10036662	0	-	9943208	9943208	8553170	6	28,90,54,81,121,229,	0,3685,15993,38595,76568,93225,
#Partially deleted in new
chr17	9946893	10059815	chr17:9946893-10059815	0	-	9946893	10019888	789624	6	90,54,86,81,121,124,	0,12308,22783,34910,72883,112798,
#Partially deleted in new
chr17	9946932	10061379	chr17:9946932-10061379	0	-	9946932	10019888	789624	6	51,54,86,81,121,161,	0,12269,22744,34871,72844,114286,
#Partially deleted in new
chr17	9959215	10036667	chr17:9959215-10036667	0	-	9959215	10019888	789624	5	40,86,81,121,216,	0,10461,22588,60561,77236,
#Deleted in new
chr17	10258761	10259232	chr17:10258761-10259232	7	+	10258761	10258761	16724991	1	471,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	10291819	10317926	chr17:10291819-10317926	3	+	10291819	10291819	8553170	2	94,429,	0,25678,
#Partially deleted in new
chr17	10300864	10373130	chr17:10300864-10373130	3	-	10300950	10364530	789624	40	101,135,96,105,171,126,204,309,125,166,184,197,119,127,390,91,146,177,243,256,137,124,118,88,74,310,171,150,119,139,104,99,64,93,112,28,157,144,216,152,	0,704,2331,2529,5594,6074,8369,8657,10238,11046,11709,12293,14828,15034,17925,19288,19486,20667,23157,27001,29522,31234,32209,39285,39463,42935,44337,44602,45815,49691,53815,54030,54219,56870,59095,59296,61253,61495,63462,72114,
#Partially deleted in new
chr17	10300865	10373005	chr17:10300865-10373005	1	-	10300950	10364530	789624	41	100,135,96,105,171,126,204,309,125,166,184,197,119,127,390,91,146,177,243,256,137,124,118,88,74,310,171,150,119,139,104,99,64,93,112,28,157,144,216,51,27,	0,703,2330,2528,5593,6073,8368,8656,10237,11045,11708,12292,14827,15033,17924,19287,19485,20666,23156,27000,29521,31233,32208,39284,39462,42934,44336,44601,45814,49690,53814,54029,54218,56869,59094,59295,61252,61494,63461,70343,72113,
#Partially deleted in new
chr17	10300865	10364544	chr17:10300865-10364544	1	-	10300950	10364530	789624	39	100,135,96,105,171,126,204,309,125,166,184,197,119,127,390,91,146,177,243,256,137,124,118,88,74,310,171,150,119,139,104,99,64,93,112,28,157,144,218,	0,703,2330,2528,5593,6073,8368,8656,10237,11045,11708,12292,14827,15033,17924,19287,19485,20666,23156,27000,29521,31233,32208,39284,39462,42934,44336,44601,45814,49690,53814,54029,54218,56869,59094,59295,61252,61494,63461,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	10320391	10341458	chr17:10320391-10341458	3	+	10320391	10320391	8553170	3	121,125,395,	0,4451,20672,
#Partially deleted in new
chr17	10383131	10537862	chr17:10383131-10537862	3	+	10383131	10383131	8553170	4	76,130,164,213,	0,23016,150192,154518,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	10383143	10623886	chr17:10383143-10623886	3	+	10383143	10383143	789624	11	64,91,76,35,133,150,79,262,116,133,1135,	0,23004,184393,205245,207499,214929,225001,225210,229315,230601,239608,
#Partially deleted in new
chr17	10383155	10535231	chr17:10383155-10535231	1	+	10383155	10383155	8553170	4	52,91,164,186,	0,22992,150168,151890,
#Partially deleted in new
chr17	10390321	10421950	chr17:10390321-10421950	3	-	10390453	10420227	789624	40	282,96,105,171,126,204,309,125,166,184,197,119,127,390,91,146,177,243,256,137,124,118,88,68,310,171,150,119,139,104,99,64,93,109,28,157,144,240,44,21,	0,1560,2220,2509,2763,3927,4811,6008,6231,6481,8122,8446,9221,10068,10547,10724,10953,11221,14008,15719,15952,16368,16570,18775,18957,20455,22048,22288,23580,23870,24064,24794,24970,25150,25359,28323,28565,29696,31341,31608,
#Partially deleted in new
chr17	10443289	10469559	chr17:10443289-10469559	3	-	10443374	10466745	789624	40	238,96,105,171,126,204,309,125,166,184,197,119,127,390,91,146,177,243,256,137,124,118,88,71,310,171,150,119,139,104,99,64,93,115,28,157,144,243,49,23,	0,1314,1505,1686,1947,3723,4528,5106,5328,5574,7163,7487,8036,8651,9126,9497,9862,10353,11265,11651,11882,12324,12524,13195,14130,15961,16662,16913,17626,19575,19800,20048,20261,21182,21391,22152,22983,23252,25998,26247,
#Partially deleted in new
chr17	10492306	10518543	chr17:10492306-10518543	3	-	10492415	10516642	789624	40	262,96,105,171,126,204,309,125,166,184,197,119,127,390,91,146,177,243,256,137,124,118,88,71,310,171,150,119,139,104,99,64,93,115,28,157,144,244,31,24,	0,2047,2262,2624,2885,3643,3934,4762,4980,5427,6319,6667,8319,8803,9287,9459,10431,10699,12503,12856,13081,13505,13705,15579,16056,17178,19532,19767,20101,20374,20560,21319,21514,21703,22561,23619,23892,24132,25933,26213,
#Partially deleted in new
chr17	10521147	10549623	chr17:10521147-10549623	1	-	10521279	10547920	789624	17	285,77,310,171,150,119,139,104,99,64,93,115,28,157,144,224,249,	0,15382,16085,16517,18057,18296,18780,19446,21727,21950,22563,22754,22952,24198,26327,26569,28227,
#Partially deleted in new
chr17	10521151	10549957	chr17:10521151-10549957	3	-	10521279	10547920	789624	40	281,96,105,171,126,204,309,125,166,184,197,119,127,390,91,146,177,243,256,137,124,118,88,77,310,171,150,119,139,104,99,64,93,115,28,157,144,224,43,322,	0,1938,2156,2344,2607,3314,3605,4072,4299,4541,5447,5786,6596,7538,8010,8184,8412,8680,10481,12133,12357,13921,14126,15378,16081,16513,18053,18292,18776,19442,21723,21946,22559,22750,22948,24194,26323,26565,28223,28484,
#Partially deleted in new
chr17	10521155	10549623	chr17:10521155-10549623	1	-	10521279	10547920	789624	40	277,96,105,171,126,204,309,125,166,184,197,119,127,390,91,146,177,243,256,137,124,118,88,77,310,171,150,119,139,104,99,64,93,115,28,157,144,224,43,65,	0,1934,2152,2340,2603,3310,3601,4068,4295,4537,5443,5782,6592,7534,8006,8180,8408,8676,10477,12129,12353,13917,14122,15374,16077,16509,18049,18288,18772,19438,21719,21942,22555,22746,22944,24190,26319,26561,28219,28403,
#Partially deleted in new
chr17	10521155	10549700	chr17:10521155-10549700	1	-	10521279	10547920	789624	18	277,77,310,171,150,119,139,104,99,64,93,115,28,157,144,224,43,65,	0,15374,16077,16509,18049,18288,18772,19438,21719,21942,22555,22746,22944,24190,26319,26561,28219,28480,
#Partially deleted in new
chr17	10543749	10547692	chr17:10543749-10547692	0	-	10543749	10547585	789624	5	54,115,28,157,218,	0,152,350,1596,3725,
#Partially deleted in new
chr17	10544002	10549623	chr17:10544002-10549623	0	-	10544002	10547920	789624	7	14,28,157,144,224,43,65,	0,97,1343,3472,3714,5372,5556,
#Partially deleted in new
chr17	10579039	10612571	chr17:10579039-10612571	1	+	10579039	10579039	8553170	3	194,262,113,	0,29314,33419,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	10611901	10623036	chr17:10611901-10623036	1	+	10611901	10611901	8553170	4	44,116,133,285,	0,557,1843,10850,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	10611907	10622855	chr17:10611907-10622855	3	+	10611907	10611907	8553170	5	38,116,133,175,104,	0,551,1837,9667,10844,
#Partially deleted in new
chr17	10613479	10622911	chr17:10613479-10622911	0	+	10613479	10613479	8553170	2	398,160,	0,9272,
#Partially deleted in new
chr17	10628525	10630029	chr17:10628525-10630029	0	-	10628525	10628525	8553170	3	154,138,188,	0,1071,1316,
#Partially deleted in new
chr17	10628526	10657309	chr17:10628526-10657309	3	-	10628652	10655064	789624	41	153,138,96,105,171,126,204,309,125,166,184,197,119,127,390,91,146,177,243,256,137,124,118,88,71,307,171,150,119,139,104,99,64,93,109,28,157,144,212,59,21,	0,1070,1315,1565,1761,3084,3286,3949,5064,5490,6313,6840,7208,9282,9516,10346,10517,10771,11033,11469,11806,12036,12558,12758,13713,13890,14299,15824,16057,17180,17402,18655,18836,20030,21050,21847,22985,23893,26334,27563,28762,
#Partially deleted in new
chr17	10628531	10629934	chr17:10628531-10629934	0	-	10628531	10628531	8553170	2	148,338,	0,1065,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	10648634	10651968	chr17:10648634-10651968	0	-	10648634	10648634	8553170	4	15,109,28,457,	0,942,1739,2877,
#Partially deleted in new
chr17	10652272	10657309	chr17:10652272-10657309	0	-	10652272	10652272	8553170	4	291,212,59,21,	0,2588,3817,5016,
#Deleted in new
chr17	10658541	10659082	chr17:10658541-10659082	3	-	10658541	10658541	8553170	1	541,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	10672473	10697568	chr17:10672473-10697568	3	-	10681118	10697507	0	6	8780,116,93,198,91,334,	0,14253,19398,20290,23267,24761,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	10679049	10697542	chr17:10679049-10697542	0	-	10695831	10697507	789624	7	2204,116,60,128,198,94,308,	0,7677,12540,12822,13714,16691,18185,
#Partially deleted in new
chr17	10680353	10697530	chr17:10680353-10697530	1	-	10681118	10697507	789624	6	900,116,93,105,91,296,	0,6373,11518,12503,15387,16881,
#Deleted in new
chr17	10680733	10683988	chr17:10680733-10683988	3	+	10680733	10680733	8553170	2	117,54,	0,3201,
#Partially deleted in new
chr17	10692923	10698375	chr17:10692923-10698375	0	-	10692923	10692923	8553170	3	38,91,436,	0,2817,5016,
#Partially deleted in new
chr17	10695561	10697527	chr17:10695561-10697527	0	-	10695561	10695561	8553170	2	270,293,	0,1673,
#Partially deleted in new
chr17	10697593	10711233	chr17:10697593-10711233	3	+	10704926	10711144	789624	4	74,618,117,400,	0,7316,8844,13240,
#Partially deleted in new
chr17	10697613	10711233	chr17:10697613-10711233	0	+	10704926	10705544	789624	4	54,706,117,400,	0,7296,8824,13220,
#Partially deleted in new
chr17	10697615	10705928	chr17:10697615-10705928	0	+	10697615	10697615	8553170	2	52,1019,	0,7294,
#Partially deleted in new
chr17	10699014	10725134	chr17:10699014-10725134	0	-	10699191	10725134	789624	3	253,60,124,	0,24255,25996,
#Partially deleted in new
chr17	10704899	10711230	chr17:10704899-10711230	1	+	10704926	10711004	789624	3	628,113,397,	0,1538,5934,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	10713294	10730316	chr17:10713294-10730316	3	-	10715452	10729851	789624	6	2294,60,124,61,30,537,	0,9975,11716,12909,15736,16485,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	10714675	10730023	chr17:10714675-10730023	1	-	10715452	10729851	789624	5	913,60,124,61,244,	0,8594,10335,11528,15104,
#Partially deleted in new
chr17	10715421	10729986	chr17:10715421-10729986	1	-	10715452	10729851	789624	4	167,124,61,207,	0,9589,10782,14358,
#Partially deleted in new
chr17	10715425	10726365	chr17:10715425-10726365	0	-	10715425	10715425	8553170	4	163,60,124,162,	0,7844,9585,10778,
#Deleted in new
chr17	10716001	10716430	chr17:10716001-10716430	5	-	10716001	10716001	16724991	1	429,	0,
#Deleted in new
chr17	10716075	10716511	chr17:10716075-10716511	7	-	10716075	10716075	16724991	1	436,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	10729776	10767006	chr17:10729776-10767006	0	+	10729776	10729776	8553170	3	100,134,328,	0,24452,36902,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	10729776	10880895	chr17:10729776-10880895	3	+	10729776	10729776	8553170	6	100,34,134,154,155,424,	0,6828,24452,118115,148593,150695,
#Partially deleted in new
chr17	10729795	10815164	chr17:10729795-10815164	1	+	10729795	10729795	789624	4	105,110,80,266,	0,72603,76367,85103,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	10729795	10738882	chr17:10729795-10738882	0	+	10729795	10729795	8553170	4	105,69,37,310,	0,4043,6806,8777,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	10729795	10766874	chr17:10729795-10766874	1	+	10729795	10729795	789624	5	105,69,37,134,196,	0,4043,6806,24433,36883,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	10729803	10768030	chr17:10729803-10768030	3	+	10729803	10729803	789624	4	97,134,178,166,	0,24425,36875,38061,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	10729809	10767052	chr17:10729809-10767052	0	+	10729809	10729809	789624	4	67,34,134,374,	0,6795,24419,36869,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	10741266	10769016	chr17:10741266-10769016	3	-	10741266	10741266	8553170	2	457,210,	0,27540,
#Partially deleted in new
chr17	10745552	10746543	chr17:10745552-10746543	7	-	10745552	10745552	16724991	2	262,214,	0,777,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	10768172	10768989	chr17:10768172-10768989	1	-	10768172	10768172	8553170	2	274,183,	0,634,
#Partially deleted in new
chr17	10792058	10794985	chr17:10792058-10794985	3	+	10792058	10792058	8553170	3	39,502,34,	0,1624,2893,
#Partially deleted in new
chr17	10794905	10838094	chr17:10794905-10838094	3	-	10794905	10794905	8553170	3	1043,207,150,	0,8700,43039,
#Partially deleted in new
chr17	10794912	10804099	chr17:10794912-10804099	3	-	10803723	10803963	789624	2	1036,494,	0,8693,
#Partially deleted in new
chr17	10795577	10797924	chr17:10795577-10797924	0	-	10795577	10795577	8553170	2	371,118,	0,2229,
#Deleted in new
chr17	10821900	10822243	chr17:10821900-10822243	3	-	10821900	10821900	8553170	1	343,	0,
#Partially deleted in new
chr17	10822474	10838445	chr17:10822474-10838445	3	-	10825231	10825645	789624	2	3309,501,	0,15470,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	10844673	10880895	chr17:10844673-10880895	3	+	10844673	10844673	8553170	4	291,154,155,424,	0,3218,33696,35798,
#Partially deleted in new
chr17	10849540	10880895	chr17:10849540-10880895	0	+	10849540	10849540	8553170	2	18,424,	0,30931,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	10857898	10858004	chr17:10857898-10858004	3	-	10857898	10857898	8553170	1	106,	0,
#Deleted in new
chr17	10860534	10861462	chr17:10860534-10861462	7	-	10860534	10860534	16724991	2	493,74,	0,854,
#Deleted in new
chr17	10878192	10880895	chr17:10878192-10880895	0	+	10878192	10878192	8553170	2	332,424,	0,2279,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	11157454	11157747	chr17:11157454-11157747	3	+	11157454	11157454	8553170	1	293,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	11197882	11242062	chr17:11197882-11242062	3	-	11197882	11197882	8553170	2	1808,98,	0,44082,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	11241262	11564063	chr17:11241262-11564063	1	+	11241422	11558304	789624	5	798,161,96,153,6310,	0,22103,138151,314477,316491,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	11241262	11564063	chr17:11241262-11564063	3	+	11241422	11558304	789624	6	798,161,96,57,153,6310,	0,22103,138151,310633,314477,316491,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	11241422	11564063	chr17:11241422-11564063	1	+	11241422	11558304	789624	4	638,161,153,6310,	0,21943,314317,316331,
#Partially deleted in new
chr17	11241940	11380461	chr17:11241940-11380461	0	+	11241940	11379535	789624	3	120,161,1048,	0,21425,137473,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	11288204	11290811	chr17:11288204-11290811	3	+	11288204	11288204	8553170	1	2607,	0,
#Partially deleted in new
chr17	11598430	11969748	chr17:11598430-11969748	3	+	11598498	11969527	789624	69	485,197,159,131,212,234,168,117,151,115,69,127,256,242,136,197,425,223,167,871,131,127,153,126,240,161,157,105,158,139,288,211,128,109,148,175,174,208,166,103,240,162,197,163,124,143,162,234,261,426,120,189,236,123,205,165,141,171,123,194,149,128,228,192,192,171,183,390,449,	0,9698,11965,13219,18980,21117,30986,34156,38203,41839,46200,48641,52638,54330,66402,70633,70939,81326,82292,91135,95437,95890,101300,102691,105772,106594,120903,129387,140449,143744,146366,149125,154402,158137,159114,165009,170022,170691,182578,185215,185869,195072,199166,209301,211815,223489,224007,224370,236207,255572,270703,273167,276518,281647,282778,285155,288394,293346,295943,304288,307230,325383,331435,333583,335449,338921,343872,363436,370869,
#Partially deleted in new
chr17	11598469	11612833	chr17:11598469-11612833	1	+	11598498	11611836	789624	4	446,197,159,1184,	0,9659,11926,13180,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	11598471	11630514	chr17:11598471-11630514	0	+	11598471	11598471	8553170	8	444,197,159,131,212,234,168,361,	0,9657,11924,13178,18939,21076,30945,31682,
#Partially deleted in new
chr17	11598498	11969746	chr17:11598498-11969746	1	+	11598498	11969527	789624	68	417,197,159,131,212,234,168,117,151,115,69,127,256,242,136,197,425,223,167,871,131,127,153,126,240,161,157,105,158,139,288,211,128,109,148,175,174,208,166,103,240,162,197,163,124,143,162,234,261,426,120,189,236,123,205,165,141,171,123,194,149,128,192,192,171,183,390,447,	0,9630,11897,13151,18912,21049,30918,34088,38135,41771,46132,48573,52570,54262,66334,70565,70871,81258,82224,91067,95369,95822,101232,102623,105704,106526,120835,129319,140381,143676,146298,149057,154334,158069,159046,164941,169954,170623,182510,185147,185801,195004,199098,209233,211747,223421,223939,224302,236139,255504,270635,273099,276450,281579,282710,285087,288326,293278,295875,304220,307162,325315,333515,335381,338853,343804,363368,370801,
#Deleted in new
chr17	11610516	11612834	chr17:11610516-11612834	0	+	11610516	11612669	789624	3	38,131,260,	0,1133,2058,
#Deleted in new
chr17	11611761	11612836	chr17:11611761-11612836	0	+	11611761	11612655	789624	2	19,294,	0,781,
#Partially deleted in new
chr17	11617399	11619934	chr17:11617399-11619934	0	+	11617399	11617399	8553170	2	223,387,	0,2148,
#Partially deleted in new
chr17	11704199	11705493	chr17:11704199-11705493	0	+	11704199	11704199	8553170	2	243,469,	0,825,
#Partially deleted in new
chr17	11723108	11727993	chr17:11723108-11727993	0	+	11723108	11723108	8553170	2	365,176,	0,4709,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	11853191	11869195	chr17:11853191-11869195	0	+	11853191	11853191	8553170	3	54,426,62,	0,811,15942,
#Partially deleted in new
chr17	11854053	11880200	chr17:11854053-11880200	0	+	11854053	11880200	789624	4	375,120,236,123,	0,15080,20895,26024,
#Partially deleted in new
chr17	11873429	11881372	chr17:11873429-11881372	0	+	11873429	11873429	8553170	4	23,236,123,164,	0,1519,6648,7779,
#Deleted in new
chr17	11874931	11875828	chr17:11874931-11875828	3	-	11874931	11874931	8553170	2	182,107,	0,790,
#Partially deleted in new
chr17	11882901	11969748	chr17:11882901-11969748	1	+	11886917	11969527	789624	15	271,165,141,171,123,194,149,128,228,192,192,171,183,390,449,	0,684,3923,8875,11472,19817,22759,40912,46964,49112,50978,54450,59401,78965,86398,
#Partially deleted in new
chr17	11882903	11969748	chr17:11882903-11969748	0	+	11882903	11882903	8553170	15	269,165,141,171,123,194,149,128,228,192,192,171,183,390,449,	0,682,3921,8873,11470,19815,22757,40910,46962,49110,50976,54448,59399,78963,86396,
#Partially deleted in new
chr17	11884333	11925461	chr17:11884333-11925461	0	+	11884333	11884333	8553170	8	252,141,171,123,194,149,128,302,	0,2491,7443,10040,18385,21327,39480,40826,
#Partially deleted in new
chr17	11953888	11977594	chr17:11953888-11977594	3	-	11953888	11953888	8553170	2	116,347,	0,23359,
#Partially deleted in new
chr17	11977438	11997510	chr17:11977438-11997510	3	-	11977956	11992829	789624	7	1306,111,85,89,190,469,80,	0,5858,6674,13023,13535,15004,19992,
#Partially deleted in new
chr17	11977444	11992917	chr17:11977444-11992917	1	-	11977956	11992829	789624	6	1300,111,85,89,190,475,	0,5852,6668,13017,13529,14998,
#Partially deleted in new
chr17	11977451	11997457	chr17:11977451-11997457	1	-	11977956	11992829	789624	7	1293,108,85,89,190,469,27,	0,5845,6661,13010,13522,14991,19979,
#Partially deleted in new
chr17	11978260	11991013	chr17:11978260-11991013	0	-	11978260	11991013	789624	4	484,85,89,40,	0,5852,12201,12713,
#Partially deleted in new
chr17	11978338	11991020	chr17:11978338-11991020	0	-	11978338	11991020	789624	5	406,108,79,89,47,	0,4958,5774,12123,12635,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	11992539	11997475	chr17:11992539-11997475	0	-	11992539	11992829	789624	3	372,153,45,	0,962,4891,
#Deleted in new
chr17	12010739	12011224	chr17:12010739-12011224	5	-	12010739	12010739	16724991	1	485,	0,
#Partially deleted in new
chr17	12010770	12021346	chr17:12010770-12021346	4	-	12010770	12010770	16724991	2	507,24,	0,10552,
#Partially deleted in new
chr17	12020823	12143823	chr17:12020823-12143823	3	+	12020886	12141260	0	11	178,103,175,120,120,52,128,78,149,46,2677,	0,34065,60532,74751,86966,89551,92409,104470,108315,119015,120323,
#Partially deleted in new
chr17	12020828	12113318	chr17:12020828-12113318	0	+	12020886	12095597	789624	5	173,120,120,52,86,	0,74746,86961,89546,92404,
#Partially deleted in new
chr17	12020833	12143830	chr17:12020833-12143830	1	+	12020886	12141260	0	12	168,33,103,175,120,120,52,128,78,149,46,2684,	0,11432,34055,60522,74741,86956,89541,92399,104460,108305,119005,120313,
#Partially deleted in new
chr17	12020869	12141282	chr17:12020869-12141282	0	+	12020886	12095597	789624	9	132,120,120,52,128,78,149,46,136,	0,74705,86920,89505,92363,104424,108269,118969,120277,
#Partially deleted in new
chr17	12020869	12141282	chr17:12020869-12141282	0	+	12020886	12095635	789624	10	132,103,120,120,52,128,78,149,46,136,	0,34019,74705,86920,89505,92363,104424,108269,118969,120277,
#Partially deleted in new
chr17	12020869	12141282	chr17:12020869-12141282	0	+	12020886	12081366	789624	10	132,175,120,120,52,128,78,149,46,136,	0,60486,74705,86920,89505,92363,104424,108269,118969,120277,
#Partially deleted in new
chr17	12020886	12141260	chr17:12020886-12141260	0	+	12020886	12081366	789624	9	115,175,120,120,52,128,78,46,114,	0,60469,74688,86903,89488,92346,104407,118952,120260,
#Partially deleted in new
chr17	12020886	12141260	chr17:12020886-12141260	0	+	12020886	12081366	789624	9	115,175,120,52,128,78,149,46,114,	0,60469,74688,89488,92346,104407,108252,118952,120260,
#Partially deleted in new
chr17	12020975	12141621	chr17:12020975-12141621	0	+	12020975	12095597	789624	7	26,120,52,128,78,46,475,	0,74599,89399,92257,104318,118863,120171,
#Partially deleted in new
chr17	12026886	12095694	chr17:12026886-12095694	0	+	12026886	12026886	8553170	4	84,103,175,120,	0,28002,54469,68688,
#Deleted in new
chr17	12036495	12036637	chr17:12036495-12036637	3	-	12036495	12036495	8553170	1	142,	0,
#Partially deleted in new
chr17	12069656	12125318	chr17:12069656-12125318	0	+	12069656	12069656	8553170	7	193,175,120,120,52,128,25,	0,11699,25918,38133,40718,43576,55637,
#Partially deleted in new
chr17	12069755	12125350	chr17:12069755-12125350	0	+	12069755	12069755	8553170	6	94,120,120,52,128,57,	0,25819,38034,40619,43477,55538,
#Deleted in new
chr17	12081898	12081996	chr17:12081898-12081996	3	+	12081898	12081898	5263520	1	98,	0,
#Partially deleted in new
chr17	12095601	12110809	chr17:12095601-12110809	0	+	12095601	12095601	8553170	3	93,120,435,	0,12188,14773,
#Partially deleted in new
chr17	12113039	12129282	chr17:12113039-12129282	0	+	12113039	12113039	8553170	3	321,78,144,	0,12254,16099,
#Partially deleted in new
chr17	12115546	12115885	chr17:12115546-12115885	7	+	12115546	12115546	16724991	1	339,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	12124298	12143730	chr17:12124298-12143730	0	+	12124298	12124298	8553170	4	1073,149,46,2584,	0,4840,15540,16848,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	12201599	12215267	chr17:12201599-12215267	3	+	12201599	12201599	8553170	4	68,144,188,318,	0,9522,12270,13350,
#Partially deleted in new
chr17	12549781	12637187	chr17:12549781-12637187	3	+	12549781	12549781	789624	4	296,162,308,2187,	0,34778,40659,85219,
#Partially deleted in new
chr17	12549980	12635782	chr17:12549980-12635782	0	+	12549980	12549980	789624	3	97,308,782,	0,40460,85020,
#Partially deleted in new
chr17	12635165	12642854	chr17:12635165-12642854	0	+	12635165	12635165	8553170	2	31,457,	0,7232,
#Partially deleted in new
chr17	12665889	12717390	chr17:12665889-12717390	0	+	12666188	12710499	789624	5	354,66,44,56,45,	0,39238,44605,49629,51456,
#Partially deleted in new
chr17	12665988	12768949	chr17:12665988-12768949	1	+	12666188	12763644	789624	14	255,66,56,76,162,176,126,254,154,933,144,129,58,5877,	0,39139,49530,51357,56858,70172,73214,78194,79930,86425,90425,92096,94661,97084,
#Partially deleted in new
chr17	12666188	12763644	chr17:12666188-12763644	3	+	12666188	12763644	789624	13	55,66,56,76,162,176,126,254,154,933,129,58,572,	0,38939,49330,51157,56658,69972,73014,77994,79730,86225,91896,94461,96884,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	12671861	12706135	chr17:12671861-12706135	3	-	12671861	12671861	789624	3	330,50,763,	0,33072,33511,
#Partially deleted in new
chr17	12744350	12765329	chr17:12744350-12765329	0	+	12744350	12763644	789624	6	86,154,933,144,58,2257,	0,1568,8063,12063,16299,18722,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	12760139	12790242	chr17:12760139-12790242	3	-	12760139	12760139	789624	2	3579,100,	0,30003,
#Partially deleted in new
chr17	12789538	12991643	chr17:12789538-12991643	1	+	12789838	12990171	789624	20	353,40,105,77,112,77,118,69,82,128,112,82,81,114,92,181,222,176,378,1612,	0,105401,106868,119358,126361,130216,139390,151517,154049,154530,159601,160110,162962,166328,167116,169178,184550,190519,194992,200493,
#Partially deleted in new
chr17	12789538	12991642	chr17:12789538-12991642	3	+	12789838	12990171	789624	21	353,40,105,77,112,77,118,69,82,128,112,82,81,114,92,181,18,222,176,378,1611,	0,105401,106868,119358,126361,130216,139390,151517,154049,154530,159601,160110,162962,166328,167116,169178,183763,184550,190519,194992,200493,
#Partially deleted in new
chr17	12789539	12991642	chr17:12789539-12991642	0	+	12789838	12943591	789624	20	352,40,105,77,112,77,69,82,128,112,82,81,114,92,181,222,176,378,52,1611,	0,105400,106867,119357,126360,130215,151516,154048,154529,159600,160109,162961,166327,167115,169177,184549,190518,194991,197561,200492,
#Partially deleted in new
chr17	12789759	12990584	chr17:12789759-12990584	1	+	12789838	12987108	789624	22	132,40,105,77,112,77,118,69,82,128,112,82,81,114,92,181,18,222,176,378,52,553,	0,105180,106647,119137,126140,129995,139169,151296,153828,154309,159380,159889,162741,166107,166895,168957,183542,184329,190298,194771,197341,200272,
#Partially deleted in new
chr17	12789759	12990584	chr17:12789759-12990584	0	+	12789838	12984783	789624	18	132,40,105,77,112,77,118,69,82,128,112,82,81,114,92,181,378,553,	0,105180,106647,119137,126140,129995,139169,151296,153828,154309,159380,159889,162741,166107,166895,168957,194771,200272,
#Partially deleted in new
chr17	12790490	12929381	chr17:12790490-12929381	0	+	12790490	12790490	8553170	7	255,40,105,77,112,77,453,	0,104449,105916,118406,125409,129264,138438,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	12917267	12917342	chr17:12917267-12917342	3	-	12917267	12917267	5263520	1	75,	0,
#Partially deleted in new
chr17	12944119	12959043	chr17:12944119-12959043	1	+	12944166	12955913	789624	8	77,112,82,81,13,100,92,327,	0,5020,5529,8381,11747,11761,12535,14597,
#Partially deleted in new
chr17	12949680	12959045	chr17:12949680-12959045	0	+	12949680	12949680	8553170	5	50,81,114,92,329,	0,2820,6186,6974,9036,
#Partially deleted in new
chr17	12955763	12974310	chr17:12955763-12974310	0	+	12955918	12974310	789624	5	217,92,181,18,222,	0,891,2953,17538,18325,
#Deleted in new
chr17	12973032	12973834	chr17:12973032-12973834	3	-	12973032	12973032	8553170	1	802,	0,
#Partially deleted in new
chr17	12973711	12981047	chr17:12973711-12981047	0	+	12973711	12973711	8553170	4	20,222,176,141,	0,377,6346,7195,
#Partially deleted in new
chr17	12980107	12985033	chr17:12980107-12985033	0	+	12980107	12984952	789624	2	126,503,	0,4423,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	12982612	12983002	chr17:12982612-12983002	3	-	12982612	12982612	8553170	1	390,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	12984488	12988916	chr17:12984488-12988916	0	+	12984488	12984488	8553170	1	4428,	0,
#Deleted in new
chr17	12990148	12990610	chr17:12990148-12990610	3	-	12990148	12990148	8553170	2	258,77,	0,385,
#Partially deleted in new
chr17	12992390	13018187	chr17:12992390-13018187	3	-	12992817	13017947	789624	24	655,145,79,121,100,110,39,139,97,119,86,139,96,113,73,59,59,120,69,58,65,71,51,485,	0,1296,2034,2373,2572,3312,3549,4156,6021,7765,9883,10050,11088,12598,13362,13530,18222,19272,20816,22048,23377,24471,24680,25312,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr17	12992390	13006546	chr17:12992390-13006546	0	-	12992390	12992390	8553170	16	655,145,79,121,100,110,39,139,97,119,86,139,96,113,73,626,	0,1296,2034,2373,2572,3312,3549,4156,6021,7765,9883,10050,11088,12598,13362,13530,
#Partially deleted in new
chr17	12992390	13017628	chr17:12992390-13017628	0	-	12992390	12992390	8553170	22	655,145,79,121,100,110,746,97,119,86,139,96,113,73,59,59,120,69,58,65,71,558,	0,1296,2034,2373,2572,3312,3549,6021,7765,9883,10050,11088,12598,13362,13530,18222,19272,20816,22048,23377,24471,24680,
#Partially deleted in new
chr17	12992391	13018021	chr17:12992391-13018021	1	-	12992817	13017947	789624	24	654,145,79,121,100,110,39,139,97,119,86,139,96,113,73,59,59,120,69,58,65,71,28,285,	0,1295,2033,2372,2571,3311,3548,4155,6020,7764,9882,10049,11087,12597,13361,13529,18221,19271,20815,22047,23376,24470,24679,25345,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	12992392	13000897	chr17:12992392-13000897	0	-	12992392	12992392	8553170	9	653,145,79,121,100,110,746,97,742,	0,1294,2032,2371,2570,3310,3547,6019,7763,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	12992392	13004108	chr17:12992392-13004108	0	-	12992392	12992392	8553170	13	653,145,79,121,100,110,39,139,97,119,86,134,630,	0,1294,2032,2371,2570,3310,3547,4154,6019,7763,9881,10053,11086,
#Partially deleted in new
chr17	12992559	13017999	chr17:12992559-13017999	1	-	12992817	13017947	789624	23	486,145,79,121,100,110,39,139,97,119,86,139,96,113,73,59,59,69,58,65,71,51,297,	0,1127,1865,2204,2403,3143,3380,3987,5852,7596,9714,9881,10919,12429,13193,13361,18053,20647,21879,23208,24302,24511,25143,
#Partially deleted in new
chr17	12992610	13013239	chr17:12992610-13013239	0	-	12992817	13013239	789624	19	435,145,79,121,100,110,39,139,97,119,86,139,21,113,73,59,59,120,33,	0,1076,1814,2153,2352,3092,3329,3936,5801,7545,9663,9830,10868,12378,13142,13310,18002,19052,20596,
#Deleted in new
chr17	12994429	12998508	chr17:12994429-12998508	0	-	12994429	12994429	8553170	6	74,299,110,39,139,97,	0,334,1273,1510,2117,3982,
#Partially deleted in new
chr17	12995702	13002384	chr17:12995702-13002384	0	-	12995702	12995702	8553170	6	110,39,139,97,119,111,	0,237,844,2709,4453,6571,
#Partially deleted in new
chr17	12998411	13011670	chr17:12998411-13011670	0	-	12998411	13011670	789624	10	97,119,86,139,96,122,73,59,59,8,	0,1744,3862,4029,5067,6577,7341,7509,12201,13251,
#Partially deleted in new
chr17	12998448	13002725	chr17:12998448-13002725	0	-	12998448	12998448	8553170	4	60,119,86,285,	0,1707,3825,3992,
#Partially deleted in new
chr17	13000176	13003554	chr17:13000176-13003554	0	-	13002547	13003554	789624	4	98,86,139,105,	0,2097,2264,3273,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	13000224	13003786	chr17:13000224-13003786	0	-	13000224	13000224	8553170	3	50,306,308,	0,2049,3254,
#Partially deleted in new
chr17	13003505	13017615	chr17:13003505-13017615	0	-	13003505	13003505	8553170	12	69,113,73,59,59,120,69,58,65,64,51,49,	0,1483,2247,2415,7107,8157,9701,10933,12262,13356,13565,14061,
#Partially deleted in new
chr17	13003548	13017683	chr17:13003548-13017683	0	-	13003548	13017084	789624	12	26,113,73,59,59,120,69,58,65,71,51,102,	0,1440,2204,2372,7064,8114,9658,10890,12219,13313,13522,14033,
#Partially deleted in new
chr17	13005771	13017664	chr17:13005771-13017664	0	-	13005771	13017084	789624	9	54,59,54,69,58,65,71,51,98,	0,149,4846,7435,8667,9996,11090,11299,11795,
#Partially deleted in new
chr17	13011662	13017643	chr17:13011662-13017643	0	-	13011662	13017084	789624	7	120,69,58,65,71,51,147,	0,1544,2776,4105,5199,5408,5834,
#Partially deleted in new
chr17	13011686	13017590	chr17:13011686-13017590	0	-	13011686	13017084	789624	7	96,69,58,65,71,51,178,	0,1520,2752,4081,5175,5384,5726,
#Partially deleted in new
chr17	13011692	13018065	chr17:13011692-13018065	0	-	13011692	13017084	789624	7	90,69,58,65,71,51,75,	0,1514,2746,4075,5169,5378,6298,
#Partially deleted in new
chr17	13011723	13017966	chr17:13011723-13017966	1	-	13013230	13017947	789624	6	59,69,65,71,51,264,	0,1483,4044,5138,5347,5979,
#Duplicated in new
chr17	13095727	13100939	chr17:13095727-13100939	3	+	13095727	13095727	8553170	3	307,172,626,	0,1120,4586,
#Duplicated in new
chr17	13095907	13100928	chr17:13095907-13100928	0	+	13095907	13095907	8553170	2	127,613,	0,4408,
#Partially deleted in new
chr17	13495688	13601927	chr17:13495688-13601927	3	-	13496196	13601129	0	2	1130,1397,	0,104842,
#Partially deleted in new
chr17	13496169	13556043	chr17:13496169-13556043	1	-	13496196	13496811	789624	2	649,101,	0,59773,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	13543528	13543646	chr17:13543528-13543646	3	-	13543528	13543528	5263520	1	118,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	13756477	13892839	chr17:13756477-13892839	0	-	13756477	13756477	8553170	3	252,70,115,	0,123824,136247,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	13776631	13792550	chr17:13776631-13792550	1	-	13776631	13776631	8553170	2	718,2282,	0,13637,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	13776831	13892839	chr17:13776831-13892839	1	-	13776831	13776831	8553170	5	518,45,188,70,115,	0,13437,88247,103470,115893,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	13777306	14069495	chr17:13777306-14069495	3	-	13777306	13777306	8553170	5	43,70,115,124,224,	0,102995,115418,121302,291965,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	13909230	13911212	chr17:13909230-13911212	3	+	13909230	13909230	8553170	1	1982,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	13932719	13940594	chr17:13932719-13940594	3	-	13932719	13932719	8553170	3	271,110,24,	0,356,7851,
#Deleted in new
chr17	14024513	14025488	chr17:14024513-14025488	7	+	14024513	14024513	16724991	3	262,149,153,	0,403,822,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	14028740	14030657	chr17:14028740-14030657	0	-	14028740	14028740	8553170	1	1917,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	14029291	14069458	chr17:14029291-14069458	1	-	14029291	14029291	789624	3	1280,477,187,	0,4648,39980,
#Partially deleted in new
chr17	14033850	14069479	chr17:14033850-14069479	0	-	14033850	14033850	8553170	2	566,208,	0,35421,
#Partially deleted in new
chr17	14069495	14077322	chr17:14069495-14077322	1	+	14069605	14077073	789624	3	153,134,588,	0,4827,7239,
#Partially deleted in new
chr17	14069528	14208677	chr17:14069528-14208677	3	+	14069605	14207213	789624	7	120,134,322,125,71,233,1868,	0,4794,7206,32589,90348,122460,137281,
#Partially deleted in new
chr17	14069603	14207585	chr17:14069603-14207585	0	+	14069605	14102129	789624	6	45,134,125,71,233,776,	0,4719,32514,90273,122385,137206,
#Partially deleted in new
chr17	14069603	14207513	chr17:14069603-14207513	0	+	14069605	14159884	789624	6	45,134,322,71,233,704,	0,4719,7131,90273,122385,137206,
#Deleted in new
chr17	14177130	14177310	chr17:14177130-14177310	3	+	14177130	14177130	8553170	1	180,	0,
#Deleted in new
chr17	14235672	14236849	chr17:14235672-14236849	3	-	14235855	14236833	789624	3	339,149,278,	0,609,899,
#Deleted in new
chr17	14235672	14236862	chr17:14235672-14236862	1	-	14235855	14236759	789624	3	339,149,167,	0,609,1023,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	14295511	14297600	chr17:14295511-14297600	3	-	14295511	14295511	8553170	2	178,1707,	0,382,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	14301082	14349404	chr17:14301082-14349404	3	+	14301518	14345646	789624	2	990,4377,	0,43945,
#Partially deleted in new
chr17	14301082	14349144	chr17:14301082-14349144	0	+	14301518	14345646	789624	3	990,675,1143,	0,43945,46919,
#Deleted in new
chr17	14303853	14305505	chr17:14303853-14305505	3	+	14303853	14303853	789624	1	1652,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	14327334	14329474	chr17:14327334-14329474	3	+	14327334	14327334	8553170	1	2140,	0,
#Deleted in new
chr17	14705075	14705534	chr17:14705075-14705534	7	-	14705075	14705075	16724991	1	459,	0,
#Partially deleted in new
chr17	14725728	14729686	chr17:14725728-14729686	3	+	14725728	14725728	8553170	2	130,102,	0,3856,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	14767582	14780203	chr17:14767582-14780203	3	-	14767582	14767582	8553170	2	2664,334,	0,12287,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	14834637	14900554	chr17:14834637-14900554	3	+	14834637	14834637	8553170	4	305,276,78,294,	0,3303,5331,65623,
#Deleted in new
chr17	14947740	14948198	chr17:14947740-14948198	7	-	14947740	14947740	16724991	1	458,	0,
#Partially deleted in new
chr17	15014804	15052276	chr17:15014804-15052276	3	+	15014804	15014804	789624	2	54,922,	0,36550,
#Deleted in new
chr17	15030974	15031957	chr17:15030974-15031957	3	+	15030974	15030974	5263520	3	127,277,363,	0,241,620,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	15105236	15106187	chr17:15105236-15106187	3	-	15105236	15105236	789624	2	307,160,	0,791,
#Partially deleted in new
chr17	15229776	15265357	chr17:15229776-15265357	3	-	15230916	15260727	789624	5	1304,141,100,112,204,	0,9694,29317,30873,35377,
#Partially deleted in new
chr17	15229776	15262589	chr17:15229776-15262589	1	-	15230916	15260727	789624	5	1304,141,100,112,165,	0,9694,29317,30873,32648,
#Partially deleted in new
chr17	15229777	15262589	chr17:15229777-15262589	1	-	15230916	15260727	789624	5	1303,141,100,112,161,	0,9693,29316,30872,32651,
#Partially deleted in new
chr17	15229789	15260789	chr17:15229789-15260789	1	-	15235246	15260727	789624	5	1291,66,141,100,140,	0,5429,9681,29304,30860,
#Partially deleted in new
chr17	15229817	15262541	chr17:15229817-15262541	1	-	15235246	15260727	789624	6	1263,66,141,100,112,113,	0,5401,9653,29276,30832,32611,
#Partially deleted in new
chr17	15230515	15265319	chr17:15230515-15265319	1	-	15230916	15239585	789624	3	565,141,166,	0,8955,34638,
#Partially deleted in new
chr17	15230992	15262544	chr17:15230992-15262544	0	-	15232542	15260727	789624	6	88,245,141,100,112,116,	0,1376,8478,28101,29657,31436,
#Partially deleted in new
chr17	15231066	15265326	chr17:15231066-15265326	0	-	15231066	15239585	789624	4	14,141,100,173,	0,8404,28027,34087,
#Partially deleted in new
chr17	15235246	15265325	chr17:15235246-15265325	1	-	15235246	15260727	789624	5	38,141,100,112,172,	0,4224,23847,25403,29907,
#Partially deleted in new
chr17	15239340	15262516	chr17:15239340-15262516	1	-	15239411	15260727	789624	4	271,100,112,88,	0,19753,21309,23088,
#Deleted in new
chr17	15251626	15251696	chr17:15251626-15251696	3	-	15251626	15251626	5263520	1	70,	0,
#Partially deleted in new
chr17	15258736	15260768	chr17:15258736-15260768	0	-	15258736	15258736	8553170	2	457,119,	0,1913,
#Deleted in new
chr17	15260279	15265308	chr17:15260279-15265308	0	-	15260279	15260279	8553170	2	482,155,	0,4874,
#Deleted in new
chr17	15260512	15261841	chr17:15260512-15261841	3	+	15260512	15260512	8553170	1	1329,	0,
#Deleted in new
chr17	15261014	15265707	chr17:15261014-15265707	3	+	15261014	15261014	8553170	2	121,252,	0,4441,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	15267460	15272290	chr17:15267460-15272290	3	-	15267460	15267460	8553170	2	1154,619,	0,4211,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	15276561	15279477	chr17:15276561-15279477	3	-	15276561	15276561	8553170	3	98,106,139,	0,1044,2777,
#Partially deleted in new
chr17	15303810	15341641	chr17:15303810-15341641	3	-	15303935	15331585	789624	9	342,155,223,144,71,84,608,34,124,	0,4853,8448,10276,15266,24181,27196,36217,37707,
#Deleted in new
chr17	15303810	15307001	chr17:15303810-15307001	0	-	15303810	15303810	8553170	2	342,153,	0,3038,
#Deleted in new
chr17	15303810	15308863	chr17:15303810-15308863	0	-	15303810	15303810	8553170	2	342,200,	0,4853,
#Partially deleted in new
chr17	15303813	15331620	chr17:15303813-15331620	1	-	15303935	15331585	789624	7	339,155,223,144,71,84,614,	0,4850,8445,10273,15263,24178,27193,
#Partially deleted in new
chr17	15303815	15341597	chr17:15303815-15341597	0	-	15314264	15331585	789624	8	337,155,140,223,193,84,608,80,	0,4848,7057,8443,10271,24176,27191,37702,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	15311344	15311451	chr17:15311344-15311451	3	+	15311344	15311344	8553170	1	107,	0,
#Partially deleted in new
chr17	15312281	15341597	chr17:15312281-15341597	0	-	15312281	15331087	789624	8	200,144,71,84,319,38,34,80,	0,1805,6795,15710,18725,19295,27746,29236,
#Partially deleted in new
chr17	15327769	15331614	chr17:15327769-15331614	0	-	15327769	15327769	8553170	2	306,608,	0,3237,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	15331142	15338556	chr17:15331142-15338556	0	-	15331142	15331585	789624	2	472,111,	0,7303,
#Partially deleted in new
chr17	15331165	15341632	chr17:15331165-15341632	0	-	15331165	15331585	789624	2	449,115,	0,10352,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	15365322	15365877	chr17:15365322-15365877	3	+	15365322	15365322	8553170	1	555,	0,
#Partially deleted in new
chr17	15379863	15417878	chr17:15379863-15417878	3	-	15379863	15379863	8553170	4	80,144,125,189,	0,2114,36245,37826,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	15408383	15408688	chr17:15408383-15408688	3	+	15408383	15408383	8553170	1	305,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	15436014	15467611	chr17:15436014-15467611	3	-	15437772	15440238	789624	4	2186,78,82,152,	0,4193,16989,31445,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	15436020	15563561	chr17:15436020-15563561	3	-	15440252	15563448	789624	7	2180,78,132,90,145,83,125,	0,4187,109764,111038,117664,119261,127416,
#Partially deleted in new
chr17	15437731	15452620	chr17:15437731-15452620	0	-	15437731	15437731	8553170	2	469,108,	0,14781,
#Partially deleted in new
chr17	15437858	15475728	chr17:15437858-15475728	0	-	15437858	15437858	8553170	2	342,128,	0,37742,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	15437887	15563559	chr17:15437887-15563559	0	-	15547129	15563448	789624	7	313,135,129,132,90,83,123,	0,65210,102545,107897,109171,117394,125549,
#Partially deleted in new
chr17	15438063	15563472	chr17:15438063-15563472	0	-	15547129	15563448	789624	6	137,78,132,90,83,36,	0,2144,107721,108995,117218,125373,
#Partially deleted in new
chr17	15438140	15563448	chr17:15438140-15563448	0	-	15547146	15563448	789624	7	60,78,132,90,65,83,12,	0,2067,107644,108918,115624,117141,125296,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	15438157	15503608	chr17:15438157-15503608	0	-	15438157	15440238	789624	3	43,78,511,	0,2050,64940,
#Deleted in new
chr17	15443638	15444191	chr17:15443638-15444191	7	+	15443638	15443638	16724991	1	553,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	15502263	15563544	chr17:15502263-15563544	1	-	15502863	15563448	789624	6	969,132,90,145,83,108,	0,43521,44795,51421,53018,61173,
#Deleted in new
chr17	15506865	15507354	chr17:15506865-15507354	7	+	15506865	15506865	16724991	1	489,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	15530772	15531089	chr17:15530772-15531089	3	-	15530772	15530772	8553170	1	317,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	15536979	15563428	chr17:15536979-15563428	1	-	15538126	15553732	789624	7	1174,129,132,90,145,83,1236,	0,3453,8805,10079,16705,18302,25213,
#Partially deleted in new
chr17	15536980	15563595	chr17:15536980-15563595	3	-	15538126	15563448	789624	7	1173,129,132,90,145,83,159,	0,3452,8804,10078,16704,18301,26456,
#Partially deleted in new
chr17	15536980	15563536	chr17:15536980-15563536	1	-	15538126	15563448	789624	7	1173,129,132,90,145,83,100,	0,3452,8804,10078,16704,18301,26456,
#Partially deleted in new
chr17	15537900	15563448	chr17:15537900-15563448	0	-	15547146	15563448	789624	7	253,129,132,90,65,83,12,	0,2532,7884,9158,15864,17381,25536,
#Partially deleted in new
chr17	15538032	15563472	chr17:15538032-15563472	0	-	15547129	15563448	789624	6	121,129,132,90,83,36,	0,2400,7752,9026,17249,25404,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	15538980	15540171	chr17:15538980-15540171	0	-	15538980	15538980	8553170	2	595,106,	0,1085,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	15540082	15563587	chr17:15540082-15563587	1	-	15540411	15563448	789624	6	479,132,90,145,83,151,	0,5702,6976,13602,15199,23354,
#Partially deleted in new
chr17	15540501	15563468	chr17:15540501-15563468	0	-	15540501	15553732	789624	6	60,132,90,145,78,32,	0,5283,6557,13183,14780,22935,
#Deleted in new
chr17	15565482	15566276	chr17:15565482-15566276	1	-	15565532	15566264	789624	1	794,	0,
#Partially deleted in new
chr17	15565483	15619512	chr17:15565483-15619512	1	-	15568891	15619512	789624	13	870,140,159,143,149,122,201,110,123,128,201,165,505,	0,3407,27853,29264,31030,33048,39739,42090,47217,48131,48349,50161,53524,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr17	15571490	15651653	chr17:15571490-15651653	3	-	15574098	15651609	789624	17	2693,143,149,122,201,110,123,128,201,165,152,172,96,166,234,96,563,	0,23257,25023,27041,33732,36083,41210,42124,42342,44154,51990,57536,60128,61018,64545,71230,79600,
#Deleted in new
chr17	15574018	15574198	chr17:15574018-15574198	3	+	15574018	15574018	8553170	1	180,	0,
#Partially deleted in new
chr17	15588387	15598797	chr17:15588387-15598797	1	-	15588974	15598586	789624	5	840,159,143,149,266,	0,4949,6360,8126,10144,
#Partially deleted in new
chr17	15588662	15619512	chr17:15588662-15619512	3	-	15588974	15619512	789624	12	565,159,143,149,122,201,110,123,128,201,165,505,	0,4674,6085,7851,9869,16560,18911,24038,24952,25170,26982,30345,
#Deleted in new
chr17	15588851	15589084	chr17:15588851-15589084	7	+	15588851	15588851	16724991	1	233,	0,
#Partially deleted in new
chr17	15588901	15598618	chr17:15588901-15598618	0	-	15594766	15598586	789624	5	326,159,79,149,87,	0,4435,5846,7612,9630,
#Partially deleted in new
chr17	15588901	15598618	chr17:15588901-15598618	1	-	15589194	15598586	789624	3	326,149,87,	0,7612,9630,
#Partially deleted in new
chr17	15594552	15596632	chr17:15594552-15596632	0	-	15594552	15594552	8553170	2	338,119,	0,1961,
#Partially deleted in new
chr17	15605223	15615694	chr17:15605223-15615694	0	-	15605223	15615694	789624	5	200,110,123,419,50,	0,2350,7477,8391,10421,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	15627959	15684299	chr17:15627959-15684299	1	-	15628614	15683075	789624	7	1239,96,166,234,96,89,1264,	0,3659,4549,8076,14761,52905,55076,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	15627959	15642964	chr17:15627959-15642964	1	-	15628614	15636236	789624	5	1239,96,166,234,244,	0,3659,4549,8076,14761,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	15627959	15684300	chr17:15627959-15684300	3	-	15628614	15651609	789624	11	1239,96,166,234,96,856,105,89,98,122,105,	0,3659,4549,8076,14761,23131,49216,52905,54894,55076,56236,
#Partially deleted in new
chr17	15627965	15636143	chr17:15627965-15636143	0	-	15628057	15636143	789624	5	96,325,96,166,108,	0,908,3653,4543,8070,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	15627966	15682879	chr17:15627966-15682879	1	-	15628614	15651609	789624	9	1232,96,166,234,96,856,105,89,26,	0,3652,4542,8069,14754,23124,49209,52898,54887,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	15627970	15684300	chr17:15627970-15684300	1	-	15628614	15651609	789624	12	1228,96,166,234,96,856,105,147,89,98,122,105,	0,3648,4538,8065,14750,23120,49205,49604,52894,54883,55065,56225,
#Partially deleted in new
chr17	15628647	15642934	chr17:15628647-15642934	1	-	15628976	15636236	789624	3	551,234,214,	0,7388,14073,
#Partially deleted in new
chr17	15628695	15632035	chr17:15628695-15632035	0	-	15628695	15628695	8553170	2	503,417,	0,2923,
#Partially deleted in new
chr17	15629160	15642932	chr17:15629160-15642932	0	-	15629160	15636236	789624	4	38,96,234,212,	0,2458,6875,13560,
#Partially deleted in new
chr17	15631658	15632923	chr17:15631658-15632923	0	-	15631658	15631658	8553170	2	56,415,	0,850,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	15632530	15643275	chr17:15632530-15643275	0	-	15632530	15636236	789624	4	144,234,96,86,	0,3505,10190,10659,
#Partially deleted in new
chr17	15632593	15680930	chr17:15632593-15680930	0	-	15632593	15680930	789624	5	81,234,96,75,66,	0,3442,10127,26208,48271,
#Partially deleted in new
chr17	15632631	15684273	chr17:15632631-15684273	0	-	15632631	15632631	8553170	7	43,234,96,89,98,122,78,	0,3404,10089,48233,50222,50404,51564,
#Partially deleted in new
chr17	15636203	15684297	chr17:15636203-15684297	0	-	15636203	15636203	8553170	8	66,96,102,147,89,91,122,102,	0,6517,40972,41371,44661,46657,46832,47992,
#Partially deleted in new
chr17	15636205	15684310	chr17:15636205-15684310	0	-	15636205	15683075	789624	5	64,96,89,122,115,	0,6515,44659,46830,47990,
#Partially deleted in new
chr17	15636221	15684283	chr17:15636221-15684283	0	-	15636221	15636221	8553170	8	48,96,105,147,89,98,122,88,	0,6499,40954,41353,44643,46632,46814,47974,
#Partially deleted in new
chr17	15642733	15684297	chr17:15642733-15684297	0	-	15642733	15642733	8553170	5	83,89,172,122,102,	0,38131,38317,40302,41462,
#Partially deleted in new
chr17	15651836	15684266	chr17:15651836-15684266	0	-	15651836	15651836	8553170	6	110,75,89,98,122,71,	0,6965,29028,31017,31199,32359,
#Partially deleted in new
chr17	15654261	15684275	chr17:15654261-15684275	0	-	15654261	15654261	8553170	5	170,89,98,122,80,	0,26603,28592,28774,29934,
#Partially deleted in new
chr17	15654389	15680918	chr17:15654389-15680918	0	-	15677607	15680918	789624	5	45,75,105,147,54,	0,4412,22786,23185,26475,
#Deleted in new
chr17	15675475	15675643	chr17:15675475-15675643	7	+	15675475	15675475	16724991	1	168,	0,
#Partially deleted in new
chr17	15677174	15684301	chr17:15677174-15684301	0	-	15677174	15677174	8553170	5	103,147,89,122,106,	0,400,3690,5861,7021,
#Partially deleted in new
chr17	15677273	15683376	chr17:15677273-15683376	0	-	15677273	15677273	8553170	4	4,147,89,341,	0,301,3591,5762,
#Partially deleted in new
chr17	15677574	15684299	chr17:15677574-15684299	0	-	15677574	15677574	8553170	5	108,89,98,122,104,	0,3290,5279,5461,6621,
#Partially deleted in new
chr17	15677630	15684298	chr17:15677630-15684298	0	-	15677630	15677630	8553170	5	91,89,111,122,103,	0,3234,5223,5405,6565,
#Partially deleted in new
chr17	15681087	15684299	chr17:15681087-15684299	0	-	15681087	15681087	8553170	4	135,98,122,104,	0,1766,1948,3108,
#Deleted in new
chr17	15682853	15684311	chr17:15682853-15684311	0	-	15682853	15682853	8553170	3	98,336,116,	0,182,1342,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	15699576	15720782	chr17:15699576-15720782	3	+	15700329	15717290	789624	6	201,319,89,115,93,4724,	0,471,1575,6810,8578,16482,
#Deleted in new
chr17	15699576	15701300	chr17:15699576-15701300	0	+	15699576	15699576	8553170	3	201,232,149,	0,558,1575,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	15699576	15720782	chr17:15699576-15720782	1	+	15699770	15717290	789624	5	201,89,115,93,4724,	0,1575,6810,8578,16482,
#Deleted in new
chr17	15699580	15700539	chr17:15699580-15700539	0	+	15699580	15699580	8553170	2	197,492,	0,467,
#Partially deleted in new
chr17	15699691	15737560	chr17:15699691-15737560	0	+	15699770	15717290	8553170	9	86,89,115,93,1255,141,76,83,77,	0,1460,6695,8463,16367,35238,35656,35905,37792,
#Partially deleted in new
chr17	15699718	15716112	chr17:15699718-15716112	1	+	15700329	15708211	789624	5	59,232,89,93,54,	0,416,1433,8436,16340,
#Partially deleted in new
chr17	15699732	15717290	chr17:15699732-15717290	1	+	15700329	15717290	789624	6	45,232,89,115,93,1232,	0,402,1419,6654,8422,16326,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	15699738	15720787	chr17:15699738-15720787	1	+	15700329	15716016	789624	6	39,319,89,115,93,4788,	0,309,1413,6648,8416,16261,
#Partially deleted in new
chr17	15699738	15716490	chr17:15699738-15716490	1	+	15699770	15716016	789624	5	39,89,115,93,491,	0,1413,6648,8416,16261,
#Deleted in new
chr17	15699739	15700677	chr17:15699739-15700677	0	+	15699739	15699739	8553170	2	38,543,	0,395,
#Partially deleted in new
chr17	15699739	15716417	chr17:15699739-15716417	0	+	15716060	15716417	789624	4	38,25,93,418,	0,6737,8415,16260,
#Partially deleted in new
chr17	15699739	15716398	chr17:15699739-15716398	1	+	15699770	15708211	789624	4	38,89,93,340,	0,1412,8415,16319,
#Partially deleted in new
chr17	15699740	15744778	chr17:15699740-15744778	3	+	15700329	15717290	8553170	17	37,319,89,115,93,1255,141,83,904,110,49,120,95,66,100,150,536,	0,307,1411,6646,8414,16318,35189,35856,37743,38980,40359,41381,42201,42673,43168,43626,44502,
#Partially deleted in new
chr17	15699740	15735371	chr17:15699740-15735371	0	+	15699740	15699740	8553170	7	37,121,89,115,93,141,24,	0,307,1411,6646,8414,35189,35607,
#Partially deleted in new
chr17	15699740	15735011	chr17:15699740-15735011	0	+	15699740	15699740	8553170	7	37,121,94,89,115,93,82,	0,307,532,1411,6646,8414,35189,
#Partially deleted in new
chr17	15699743	15716109	chr17:15699743-15716109	0	+	15699770	15716109	789624	6	34,159,89,115,93,51,	0,464,1408,6643,8411,16315,
#Partially deleted in new
chr17	15699744	15716044	chr17:15699744-15716044	1	+	15700329	15716016	789624	6	33,232,89,115,93,45,	0,390,1407,6642,8410,16255,
#Partially deleted in new
chr17	15699752	15716055	chr17:15699752-15716055	0	+	15700329	15716055	789624	4	25,232,89,56,	0,382,1399,16247,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	15699776	15720787	chr17:15699776-15720787	1	+	15700329	15717290	789624	5	590,89,115,93,4729,	0,1375,6610,8378,16282,
#Partially deleted in new
chr17	15700109	15711437	chr17:15700109-15711437	0	+	15700109	15700109	8553170	5	59,89,115,93,97,	0,1042,6277,8045,11231,
#Partially deleted in new
chr17	15700132	15709938	chr17:15700132-15709938	1	+	15700329	15709907	789624	5	234,89,115,93,123,	0,1019,6254,8022,9683,
#Deleted in new
chr17	15700162	15701230	chr17:15700162-15701230	0	+	15700162	15700162	8553170	2	425,79,	0,989,
#Partially deleted in new
chr17	15701198	15708424	chr17:15701198-15708424	0	+	15701198	15708276	789624	3	42,115,270,	0,5188,6956,
#Partially deleted in new
chr17	15701356	15716252	chr17:15701356-15716252	0	+	15701356	15701356	8553170	4	111,115,93,253,	0,5030,6798,14643,
#Deleted in new
chr17	15704231	15704900	chr17:15704231-15704900	7	-	15704231	15704231	16724991	1	669,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	15717284	15720452	chr17:15717284-15720452	0	+	15717284	15717284	8553170	2	29,679,	0,2489,
#Deleted in new
chr17	15732246	15735679	chr17:15732246-15735679	0	+	15735348	15735679	789624	5	138,171,102,76,83,	0,2457,2722,3101,3350,
#Deleted in new
chr17	15732246	15735395	chr17:15732246-15735395	0	+	15735348	15735395	789624	3	138,367,48,	0,2457,3101,
#Partially deleted in new
chr17	15732246	15749192	chr17:15732246-15749192	1	+	15735348	15740235	789624	11	138,171,102,76,83,40,81,108,110,635,434,	0,2457,2722,3101,3350,5237,5750,6033,6474,7853,16512,
#Deleted in new
chr17	15732255	15737523	chr17:15732255-15737523	0	+	15735348	15737523	789624	7	129,47,171,102,76,83,40,	0,1786,2448,2713,3092,3341,5228,
#Deleted in new
chr17	15732256	15734863	chr17:15732256-15734863	0	+	15732256	15732256	8553170	4	128,224,47,160,	0,1457,1785,2447,
#Partially deleted in new
chr17	15732276	15744783	chr17:15732276-15744783	3	+	15735348	15742028	789624	15	108,141,76,83,40,81,108,110,49,120,95,66,100,150,541,	0,2653,3071,3320,5207,5720,6003,6444,7823,8845,9665,10137,10632,11090,11966,
#Partially deleted in new
chr17	15732282	15746162	chr17:15732282-15746162	0	+	15735348	15742028	789624	16	102,141,76,83,40,81,108,110,49,120,95,66,100,150,210,85,	0,2647,3065,3314,5201,5714,5997,6438,7817,8839,9659,10131,10626,11084,11960,13795,
#Partially deleted in new
chr17	15732282	15744454	chr17:15732282-15744454	0	+	15732282	15732282	8553170	12	102,141,76,83,904,110,49,1779,66,100,150,212,	0,2647,3065,3314,5201,6438,7817,7975,10131,10626,11084,11960,
#Deleted in new
chr17	15732282	15740941	chr17:15732282-15740941	1	+	15735348	15740235	789624	9	102,141,76,83,40,81,108,110,842,	0,2647,3065,3314,5201,5714,5997,6438,7817,
#Deleted in new
chr17	15732307	15735033	chr17:15732307-15735033	0	+	15732307	15732307	8553170	2	77,301,	0,2425,
#Deleted in new
chr17	15733835	15735389	chr17:15733835-15735389	0	+	15735348	15735389	789624	4	253,142,102,42,	0,897,1133,1512,
#Deleted in new
chr17	15733844	15735037	chr17:15733844-15735037	0	+	15733844	15733844	8553170	2	244,334,	0,859,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	15735022	15743791	chr17:15735022-15743791	3	-	15735022	15735022	8553170	4	353,116,88,189,	0,697,1439,8580,
#Deleted in new
chr17	15738338	15741221	chr17:15738338-15741221	0	+	15738338	15738338	8553170	3	492,49,100,	0,1761,2783,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	15738502	15743799	chr17:15738502-15743799	0	-	15738502	15738502	8553170	2	287,197,	0,5100,
#Partially deleted in new
chr17	15740627	15749192	chr17:15740627-15749192	1	-	15740627	15740627	8553170	2	109,432,	0,8133,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	15748702	15749315	chr17:15748702-15749315	7	-	15748702	15748702	16724991	1	613,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	15761613	15763769	chr17:15761613-15763769	3	-	15761613	15761613	8553170	2	231,184,	0,1972,
#Partially deleted in new
chr17	15764702	15765664	chr17:15764702-15765664	7	+	15764702	15764702	16724991	3	138,158,120,	0,405,842,
#Partially deleted in new
chr17	15768716	15771426	chr17:15768716-15771426	7	-	15768716	15768716	16724991	2	857,1113,	0,1597,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	15782340	15782455	chr17:15782340-15782455	7	+	15782340	15782340	16724991	1	115,	0,
#Deleted in new
chr17	15783287	15784307	chr17:15783287-15784307	7	+	15783287	15783287	16724991	1	1020,	0,
#Deleted in new
chr17	15786617	15787575	chr17:15786617-15787575	7	+	15786617	15786617	16724991	1	958,	0,
#Deleted in new
chr17	15787786	15788205	chr17:15787786-15788205	3	-	15787786	15787786	8553170	2	32,315,	0,104,
#Deleted in new
chr17	15789015	15789705	chr17:15789015-15789705	3	+	15789015	15789015	8553170	1	690,	0,
#Deleted in new
chr17	15792861	15793045	chr17:15792861-15793045	7	+	15792861	15792861	16724991	1	184,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	15806240	15817742	chr17:15806240-15817742	3	-	15806240	15806240	789624	3	658,78,215,	0,9724,11287,
#Partially deleted in new
chr17	15829368	15908632	chr17:15829368-15908632	7	+	15829368	15829368	16724991	9	211,77,216,145,101,82,143,99,78,	0,4241,4682,19602,21201,29368,31456,34686,79186,
#Partially deleted in new
chr17	15829483	15858818	chr17:15829483-15858818	4	+	15829483	15829483	16724991	4	316,74,100,82,	0,20940,21087,29253,
#Partially deleted in new
chr17	15944916	15975746	chr17:15944916-15975746	3	+	15945248	15975342	789624	2	667,1068,	0,29762,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	15973862	15975737	chr17:15973862-15975737	0	+	15973862	15973862	8553170	1	1875,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	15976559	15999692	chr17:15976559-15999692	3	-	15978046	15999594	789624	5	1604,105,103,22,174,	0,4480,10706,17197,22959,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	15976559	15999694	chr17:15976559-15999694	0	-	15976559	15976559	8553170	5	1604,105,103,22,35,	0,4480,10706,17197,23100,
#Partially deleted in new
chr17	15976559	15999588	chr17:15976559-15999588	0	-	15993771	15999588	789624	6	533,120,105,103,22,86,	0,1484,4480,10706,17197,22943,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	15976568	15980367	chr17:15976568-15980367	0	-	15976568	15976568	8553170	4	524,335,120,125,	0,1010,1475,3674,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	15977682	15999636	chr17:15977682-15999636	0	-	15987363	15999594	789624	5	231,120,105,103,118,	0,361,3357,9583,21836,
#Partially deleted in new
chr17	15977726	15999688	chr17:15977726-15999688	0	-	15993771	15999594	789624	6	187,120,105,103,22,186,	0,317,3313,9539,16030,21776,
#Partially deleted in new
chr17	15977726	15999684	chr17:15977726-15999684	1	-	15978046	15999594	789624	6	187,120,105,103,22,166,	0,317,3313,9539,16030,21792,
#Partially deleted in new
chr17	15977726	15999639	chr17:15977726-15999639	0	-	15993771	15999594	789624	6	187,120,105,103,22,134,	0,317,3313,9539,16030,21779,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	15977726	15999589	chr17:15977726-15999589	1	-	15986847	15999549	789624	5	437,93,103,22,71,	0,9073,9539,16030,21792,
#Partially deleted in new
chr17	15977726	15999717	chr17:15977726-15999717	0	-	15993771	15999594	789624	5	437,105,103,22,212,	0,3313,9539,16030,21779,
#Partially deleted in new
chr17	15977729	15999683	chr17:15977729-15999683	0	-	15977729	15977729	8553170	6	184,120,105,103,22,24,	0,314,3310,9536,16027,21930,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	15977732	15999669	chr17:15977732-15999669	0	-	15993771	15999594	789624	6	431,105,93,103,22,164,	0,3307,9067,9533,16024,21773,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	15977732	15999634	chr17:15977732-15999634	0	-	15993771	15999594	789624	8	181,120,105,87,103,240,22,129,	0,311,3307,9067,9533,13132,16024,21773,
#Partially deleted in new
chr17	15977890	15999681	chr17:15977890-15999681	0	-	15993771	15999594	789624	5	273,105,103,22,179,	0,3149,9375,15866,21612,
#Partially deleted in new
chr17	15977924	15993830	chr17:15977924-15993830	0	-	15977924	15977924	8553170	4	239,105,103,74,	0,3115,9341,15832,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	15978077	15999684	chr17:15978077-15999684	0	-	15986847	15999594	789624	5	86,105,93,103,179,	0,2962,8722,9188,21428,
#Partially deleted in new
chr17	15999379	16028912	chr17:15999379-16028912	3	+	15999848	16027522	789624	10	653,128,111,39,57,62,95,155,163,1539,	0,738,2535,3413,4451,4821,7094,25637,27160,27994,
#Partially deleted in new
chr17	15999783	16004251	chr17:15999783-16004251	0	+	15999783	16001918	789624	6	249,265,111,175,57,51,	0,334,2131,2873,4047,4417,
#Partially deleted in new
chr17	15999801	16028786	chr17:15999801-16028786	0	+	15999801	16001918	789624	10	231,265,111,39,57,62,95,155,163,1413,	0,316,2113,2991,4029,4399,6672,25215,26738,27572,
#Deleted in new
chr17	15999823	16000460	chr17:15999823-16000460	0	+	15999823	15999823	8553170	2	209,343,	0,294,
#Partially deleted in new
chr17	15999833	16003853	chr17:15999833-16003853	0	+	15999833	16002668	789624	5	199,128,111,175,23,	0,284,2081,2823,3997,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	16023322	16023653	chr17:16023322-16023653	3	-	16023322	16023322	8553170	1	331,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	16023672	16028786	chr17:16023672-16028786	0	+	16023672	16023672	8553170	3	1499,163,1413,	0,2867,3701,
#Deleted in new
chr17	16024617	16028786	chr17:16024617-16028786	0	+	16024617	16024617	8553170	2	554,2247,	0,1922,
#Partially deleted in new
chr17	16025087	16045015	chr17:16025087-16045015	0	+	16025087	16044555	789624	3	84,163,513,	0,1452,19415,
#Deleted in new
chr17	16025151	16027080	chr17:16025151-16027080	0	+	16025151	16026710	789624	2	20,541,	0,1388,
#Boundary problem: need 46, got 0, diff 46, mapped 0.0
chr17	16029156	16215549	chr17:16029156-16215549	3	-	16032295	16194569	0	46	3327,180,222,54,143,144,224,158,129,494,166,120,150,210,228,361,257,84,141,169,101,102,121,161,196,130,508,127,140,63,218,125,102,55,179,91,173,67,53,57,114,183,193,134,178,188,	0,5608,10276,11284,17794,19688,28357,28750,29314,32244,32948,34911,35713,36328,38737,41008,42252,42988,44272,46377,50807,51251,51450,57125,62706,69210,72093,79629,88731,90266,91895,96925,108154,109001,109851,114449,117219,120294,122789,124182,129603,135822,142646,157397,165305,186205,
#Boundary problem: need 44, got 0, diff 44, mapped 0.0
chr17	16030095	16215560	chr17:16030095-16215560	1	-	16032295	16194569	789624	44	2388,177,222,54,143,144,224,158,129,494,166,120,150,207,222,361,257,84,141,169,101,102,121,161,196,130,556,127,140,63,218,125,102,55,179,91,173,67,53,57,114,183,178,199,	0,4669,9337,10345,16855,18749,27418,27811,28375,31305,32009,33972,34774,35389,37798,40069,41313,42049,43333,45438,49868,50312,50511,56186,61767,68271,71154,78690,87792,89327,90956,95986,107215,108062,108912,113510,116280,119355,121850,123243,128664,134883,164366,185266,
#Partially deleted in new
chr17	16031403	16194613	chr17:16031403-16194613	1	-	16032295	16194569	0	45	1080,180,222,54,143,144,224,158,129,137,166,120,150,210,228,361,257,84,141,169,101,102,121,161,196,130,556,127,140,63,218,125,102,55,179,91,173,67,53,57,114,183,193,134,152,	0,3361,8029,9037,15547,17441,26110,26503,27067,30354,30701,32664,33466,34081,36490,38761,40005,40741,42025,44130,48560,49004,49203,54878,60459,66963,69846,77382,86484,88019,89648,94678,105907,106754,107604,112202,114972,118047,120542,121935,127356,133575,140399,155150,163058,
#Partially deleted in new
chr17	16031403	16058336	chr17:16031403-16058336	0	-	16031403	16031403	8553170	8	1080,177,222,54,143,144,224,430,	0,3361,8029,9037,15547,17441,26110,26503,
#Partially deleted in new
chr17	16031403	16068412	chr17:16031403-16068412	0	-	16031403	16031403	8553170	15	1080,177,222,54,143,144,224,158,129,494,166,120,150,207,519,	0,3361,8029,9037,15547,17441,26110,26503,27067,29997,30701,32664,33466,34081,36490,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	16031987	16040108	chr17:16031987-16040108	0	-	16031987	16031987	8553170	3	496,180,676,	0,2777,7445,
#Partially deleted in new
chr17	16032091	16080007	chr17:16032091-16080007	0	-	16032295	16080007	789624	17	392,180,222,54,143,144,224,158,129,494,166,120,150,210,228,361,44,	0,2673,7341,8349,14859,16753,25422,25815,26379,29309,30013,31976,32778,33393,35802,38073,47872,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	16032432	16040659	chr17:16032432-16040659	0	-	16032432	16032432	8553170	4	51,180,222,219,	0,2332,7000,8008,
#Partially deleted in new
chr17	16032472	16047035	chr17:16032472-16047035	0	-	16032472	16047035	789624	5	11,180,222,51,85,	0,2292,6960,7968,14478,
#Deleted in new
chr17	16039219	16039466	chr17:16039219-16039466	0	-	16039292	16039466	789624	1	247,	0,
#Partially deleted in new
chr17	16039516	16057723	chr17:16039516-16057723	0	-	16039516	16057723	789624	5	138,54,104,144,210,	0,924,7473,9328,17997,
#Partially deleted in new
chr17	16040444	16057730	chr17:16040444-16057730	0	-	16040444	16057730	789624	4	50,143,141,217,	0,6506,8400,17069,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	16040471	16041273	chr17:16040471-16041273	3	+	16040471	16040471	8553170	1	802,	0,
#Deleted in new
chr17	16044620	16044961	chr17:16044620-16044961	7	+	16044620	16044620	16724991	1	341,	0,
#Deleted in new
chr17	16046891	16049397	chr17:16046891-16049397	0	-	16046891	16046891	8553170	2	202,553,	0,1953,
#Partially deleted in new
chr17	16046899	16080513	chr17:16046899-16080513	0	-	16046899	16046899	8553170	18	194,144,224,158,129,494,166,120,150,207,228,361,257,84,141,169,101,163,	0,1945,10614,11007,11571,14501,15205,17168,17970,18585,20994,23265,24509,25245,26529,28634,33064,33451,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	16056973	16057935	chr17:16056973-16057935	0	-	16056973	16056973	8553170	2	764,29,	0,933,
#Partially deleted in new
chr17	16061866	16065885	chr17:16061866-16065885	0	-	16061866	16061866	8553170	5	28,166,120,150,401,	0,238,2201,3003,3618,
#Deleted in new
chr17	16084041	16084381	chr17:16084041-16084381	7	+	16084041	16084041	16724991	1	340,	0,
#Partially deleted in new
chr17	16086398	16091918	chr17:16086398-16091918	0	-	16086398	16091918	789624	3	44,174,56,	0,773,5464,
#Partially deleted in new
chr17	16091563	16194639	chr17:16091563-16194639	1	-	16091854	16194569	0	19	495,130,556,127,140,63,218,125,102,55,179,91,173,67,53,57,114,183,178,	0,6803,9686,17222,26324,27859,29488,34518,45747,46594,47444,52042,54812,57887,60382,61775,67196,73415,102898,
#Deleted in new
chr17	16098703	16098807	chr17:16098703-16098807	3	+	16098703	16098703	8553170	1	104,	0,
#Partially deleted in new
chr17	16101717	16122635	chr17:16101717-16122635	0	-	16101717	16101717	8553170	6	40,127,140,63,218,26,	0,7068,16170,17705,19334,20892,
#Partially deleted in new
chr17	16126081	16215537	chr17:16126081-16215537	0	-	16126081	16194569	789624	15	128,102,55,179,91,173,67,53,57,114,183,193,134,178,176,	0,11229,12076,12926,17524,20294,23369,25864,27257,32678,38897,45721,60472,68380,89280,
#Partially deleted in new
chr17	16126106	16215529	chr17:16126106-16215529	0	-	16126106	16194569	789624	16	103,102,55,179,91,173,67,27,53,57,114,183,193,134,178,168,	0,11204,12051,12901,17499,20269,23344,25483,25839,27232,32653,38872,45696,60447,68355,89255,
#Partially deleted in new
chr17	16126131	16215530	chr17:16126131-16215530	0	-	16171995	16194569	789624	15	75,102,55,179,91,173,67,53,57,114,183,218,134,178,169,	0,11179,12026,12876,17474,20244,23319,25814,27207,32628,38847,45671,60422,68330,89230,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	16137767	16137872	chr17:16137767-16137872	3	-	16137767	16137767	8553170	1	105,	0,
#Partially deleted in new
chr17	16164870	16215548	chr17:16164870-16215548	0	-	16164870	16164870	8553170	5	291,193,134,178,187,	0,6932,21683,29591,50491,
#Partially deleted in new
chr17	16164905	16194611	chr17:16164905-16194611	0	-	16164905	16164905	8553170	2	256,150,	0,29556,
#Partially deleted in new
chr17	16171862	16218185	chr17:16171862-16218185	0	-	16171862	16194569	789624	5	133,134,178,438,321,	0,14691,22599,43791,46002,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	16191831	16192151	chr17:16191831-16192151	3	+	16191831	16191831	8553170	1	320,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	16198170	16215401	chr17:16198170-16215401	0	-	16198170	16198170	8553170	2	549,40,	0,17191,
#Partially deleted in new
chr17	16217190	16300187	chr17:16217190-16300187	0	+	16217190	16217190	8553170	3	271,100,300,	0,16780,82697,
#Partially deleted in new
chr17	16217208	16348801	chr17:16217208-16348801	1	+	16217226	16348718	789624	4	253,100,91,110,	0,16762,82679,131483,
#Partially deleted in new
chr17	16217209	16326259	chr17:16217209-16326259	3	+	16217226	16325898	789624	7	252,100,91,68,32,134,460,	0,16761,82678,96337,99471,100565,108590,
#Partially deleted in new
chr17	16217209	16326411	chr17:16217209-16326411	1	+	16217226	16325906	789624	6	252,100,91,68,134,612,	0,16761,82678,96337,100565,108590,
#Partially deleted in new
chr17	16217209	16317115	chr17:16217209-16317115	0	+	16217209	16217209	8553170	5	252,100,91,68,435,	0,16761,82678,96337,99471,
#Partially deleted in new
chr17	16217209	16316833	chr17:16217209-16316833	0	+	16217226	16316833	789624	6	252,100,91,68,32,39,	0,16761,82678,96337,99471,99585,
#Partially deleted in new
chr17	16217219	16317624	chr17:16217219-16317624	0	+	16217226	16299958	789624	4	242,91,68,944,	0,82668,96327,99461,
#Partially deleted in new
chr17	16217236	16234140	chr17:16217236-16234140	0	+	16217236	16217236	8553170	2	225,170,	0,16734,
#Deleted in new
chr17	16217245	16218219	chr17:16217245-16218219	0	+	16217245	16217609	789624	2	216,672,	0,302,
#Deleted in new
chr17	16282013	16282088	chr17:16282013-16282088	3	+	16282013	16282013	5263520	1	75,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	16312386	16317819	chr17:16312386-16317819	0	+	16312386	16312386	8553170	3	438,68,45,	0,1160,5388,
#Partially deleted in new
chr17	16313546	16342651	chr17:16313546-16342651	0	+	16313546	16325906	789624	4	68,134,237,79,	0,4228,12253,29026,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	16316701	16351797	chr17:16316701-16351797	0	+	16316701	16316701	8553170	2	987,1173,	0,33923,
#Partially deleted in new
chr17	16317390	16325904	chr17:16317390-16325904	0	+	16317390	16317390	8553170	2	518,105,	0,8409,
#Partially deleted in new
chr17	16326484	16347674	chr17:16326484-16347674	0	+	16326484	16326484	8553170	3	421,148,130,	0,16088,21060,
#Partially deleted in new
chr17	16326843	16344495	chr17:16326843-16344495	0	+	16326843	16326843	8553170	3	62,148,178,	0,15729,17474,
#Partially deleted in new
chr17	16342533	16353499	chr17:16342533-16353499	3	-	16342816	16353436	789624	5	408,115,70,99,473,	0,2063,6082,7397,10493,
#Partially deleted in new
chr17	16342533	16344742	chr17:16342533-16344742	0	-	16342533	16342533	8553170	2	408,146,	0,2063,
#Partially deleted in new
chr17	16342533	16353456	chr17:16342533-16353456	0	-	16349314	16353436	789624	5	408,115,718,99,430,	0,2063,6082,7397,10493,
#Partially deleted in new
chr17	16342873	16349956	chr17:16342873-16349956	0	-	16349314	16349956	789624	5	68,115,70,194,26,	0,1723,5742,6266,7057,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	16348037	16348708	chr17:16348037-16348708	0	-	16348037	16348037	8553170	1	671,	0,
#Partially deleted in new
chr17	16349501	16353656	chr17:16349501-16353656	0	-	16349501	16349501	8553170	2	528,29,	0,4126,
#Partially deleted in new
chr17	16349713	16353445	chr17:16349713-16353445	0	-	16349713	16349713	8553170	2	316,419,	0,3313,
#Partially deleted in new
chr17	16380797	16382038	chr17:16380797-16382038	0	+	16381907	16382038	789624	2	239,137,	0,1104,
#Partially deleted in new
chr17	16380798	16382740	chr17:16380798-16382740	3	+	16381907	16382597	0	2	386,839,	0,1103,
#Partially deleted in new
chr17	16380930	16382526	chr17:16380930-16382526	0	+	16381907	16382526	789624	2	99,625,	0,971,
#Partially deleted in new
chr17	16381090	16382739	chr17:16381090-16382739	1	+	16381907	16382597	789624	3	94,229,381,	0,811,1268,
#Partially deleted in new
chr17	16381094	16382745	chr17:16381094-16382745	0	+	16381094	16381094	8553170	2	90,387,	0,1264,
#Partially deleted in new
chr17	16381289	16382740	chr17:16381289-16382740	1	+	16381907	16382597	0	2	173,839,	0,612,
#Partially deleted in new
chr17	16381340	16382740	chr17:16381340-16382740	1	+	16381907	16382597	0	2	175,839,	0,561,
#Partially deleted in new
chr17	16381464	16382186	chr17:16381464-16382186	0	+	16381907	16382186	0	2	215,285,	0,437,
#Partially deleted in new
chr17	16381464	16382742	chr17:16381464-16382742	1	+	16381907	16382597	0	2	215,841,	0,437,
#Partially deleted in new
chr17	16382151	16382669	chr17:16382151-16382669	3	-	16382151	16382151	8553170	2	359,102,	0,416,
#Deleted in new
chr17	16391433	16391882	chr17:16391433-16391882	7	+	16391433	16391433	16724991	1	449,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	16414523	16416689	chr17:16414523-16416689	3	-	16414523	16414523	8553170	1	2166,	0,
#Partially deleted in new
chr17	16415541	16437003	chr17:16415541-16437003	3	+	16417668	16436889	0	15	292,307,134,291,299,171,156,99,71,166,67,335,125,80,215,	0,2020,4573,7057,7927,10557,11180,11907,12775,13275,16242,16424,18032,19348,21247,
#Partially deleted in new
chr17	16419336	16423767	chr17:16419336-16423767	0	+	16419336	16423767	789624	4	72,134,291,299,	0,778,3262,4132,
#Deleted in new
chr17	16427473	16428719	chr17:16427473-16428719	3	+	16427473	16427473	8553170	2	74,403,	0,843,
#Partially deleted in new
chr17	16428329	16432269	chr17:16428329-16432269	0	+	16428329	16428329	8553170	3	58,166,304,	0,487,3636,
#Partially deleted in new
chr17	16428375	16437003	chr17:16428375-16437003	0	+	16428375	16434943	789624	4	12,166,80,215,	0,441,6514,8413,
#Partially deleted in new
chr17	16432054	16437003	chr17:16432054-16437003	0	+	16432054	16436834	789624	3	246,125,215,	0,1519,4734,
#Partially deleted in new
chr17	16432065	16437003	chr17:16432065-16437003	0	+	16432065	16434943	789624	3	235,80,215,	0,2824,4723,
#Partially deleted in new
chr17	16432237	16437001	chr17:16432237-16437001	0	+	16432237	16434943	789624	4	63,125,111,213,	0,1336,2621,4551,
#Partially deleted in new
chr17	16433231	16437003	chr17:16433231-16437003	0	+	16433231	16433231	8553170	3	467,80,215,	0,1658,3557,
#Deleted in new
chr17	16434701	16437003	chr17:16434701-16437003	0	+	16434701	16434701	8553170	2	268,215,	0,2087,
#Partially deleted in new
chr17	16438821	16470453	chr17:16438821-16470453	0	+	16438821	16438821	789624	5	208,88,69,57,152,	0,505,1363,2252,31480,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	16438974	16441738	chr17:16438974-16441738	1	+	16438974	16438974	789624	6	55,88,123,69,57,371,	0,352,606,1210,2099,2393,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	16438984	16441830	chr17:16438984-16441830	0	+	16438984	16438984	789624	5	76,88,69,57,463,	0,342,1200,2089,2383,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	16438985	16441733	chr17:16438985-16441733	0	+	16438985	16438985	789624	4	75,88,69,366,	0,341,1199,2382,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	16438986	16442028	chr17:16438986-16442028	0	+	16438986	16438986	789624	6	74,88,44,69,57,661,	0,340,673,1198,2087,2381,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	16439010	16441995	chr17:16439010-16441995	0	+	16439010	16439010	8553170	4	50,927,57,628,	0,316,2063,2357,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	16439019	16442012	chr17:16439019-16442012	1	+	16439019	16439019	789624	5	41,67,69,57,645,	0,307,1165,2054,2348,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	16439036	16478678	chr17:16439036-16478678	0	+	16439036	16439036	8553170	6	24,88,69,57,77,257,	0,290,1148,2037,31265,39385,
#Partially deleted in new
chr17	16439036	16470350	chr17:16439036-16470350	1	+	16439036	16439036	789624	7	24,88,69,353,109,151,49,	0,290,1148,21856,23796,24130,31265,
#Partially deleted in new
chr17	16439036	16470371	chr17:16439036-16470371	0	+	16439036	16439036	789624	4	378,69,57,70,	0,1148,2037,31265,
#Partially deleted in new
chr17	16439036	16441190	chr17:16439036-16441190	0	+	16439036	16439036	789624	3	378,69,117,	0,1148,2037,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	16439036	16441615	chr17:16439036-16441615	0	+	16439036	16439036	8553170	6	24,88,44,143,57,248,	0,290,623,1074,2037,2331,
#Partially deleted in new
chr17	16439037	16441502	chr17:16439037-16441502	0	+	16439037	16439037	8553170	4	23,44,69,429,	0,622,1147,2036,
#Partially deleted in new
chr17	16439037	16441209	chr17:16439037-16441209	0	+	16439037	16439037	8553170	4	23,88,673,136,	0,289,543,2036,
#Partially deleted in new
chr17	16439037	16470459	chr17:16439037-16470459	3	+	16439037	16439037	789624	7	23,88,69,57,109,81,158,	0,289,1147,2036,23795,24129,31264,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	16439044	16442028	chr17:16439044-16442028	1	+	16439044	16439044	789624	5	370,44,69,57,661,	0,615,1140,2029,2323,
#Partially deleted in new
chr17	16439053	16470532	chr17:16439053-16470532	0	+	16439053	16439053	789624	7	7,88,69,57,109,151,231,	0,273,1131,2020,23779,24113,31248,
#Deleted in new
chr17	16439055	16439691	chr17:16439055-16439691	0	+	16439055	16439055	8553170	3	190,88,32,	0,271,604,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	16439056	16441966	chr17:16439056-16441966	0	+	16439056	16439056	8553170	5	4,88,143,57,599,	0,270,1054,2017,2311,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	16439058	16441999	chr17:16439058-16441999	1	+	16439058	16439058	789624	3	356,69,632,	0,1126,2309,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	16439062	16441861	chr17:16439062-16441861	1	+	16439062	16439062	789624	4	352,176,69,494,	0,465,1122,2305,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	16439320	16441987	chr17:16439320-16441987	1	+	16439320	16439320	789624	5	94,176,69,57,620,	0,207,864,1753,2047,
#Partially deleted in new
chr17	16439326	16441566	chr17:16439326-16441566	0	+	16439326	16439326	8553170	4	88,123,69,493,	0,254,858,1747,
#Partially deleted in new
chr17	16439326	16463986	chr17:16439326-16463986	0	+	16439326	16439326	8553170	6	88,176,69,109,84,268,	0,201,858,23506,23837,24392,
#Partially deleted in new
chr17	16439326	16463850	chr17:16439326-16463850	0	+	16439326	16439326	8553170	7	88,176,69,57,109,81,132,	0,201,858,1747,23506,23840,24392,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	16439326	16441832	chr17:16439326-16441832	1	+	16439326	16439326	8553170	4	377,69,57,465,	0,858,1747,2041,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	16439326	16442023	chr17:16439326-16442023	0	+	16439326	16439326	789624	4	88,123,69,656,	0,254,858,2041,
#Partially deleted in new
chr17	16439326	16463986	chr17:16439326-16463986	0	+	16439326	16439326	8553170	5	88,69,109,154,268,	0,858,23506,23837,24392,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	16439326	16441779	chr17:16439326-16441779	0	+	16439326	16439326	8553170	3	88,69,706,	0,858,1747,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	16439344	16441742	chr17:16439344-16441742	1	+	16439344	16439344	8553170	5	70,176,143,57,375,	0,183,766,1729,2023,
#Deleted in new
chr17	16439504	16439576	chr17:16439504-16439576	3	+	16439504	16439504	789624	1	72,	0,
#Deleted in new
chr17	16440035	16440106	chr17:16440035-16440106	3	+	16440035	16440035	789624	1	71,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	16440478	16440952	chr17:16440478-16440952	3	-	16440478	16440478	8553170	2	179,125,	0,349,
#Deleted in new
chr17	16441225	16441298	chr17:16441225-16441298	3	+	16441225	16441225	789624	1	73,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	16441576	16448294	chr17:16441576-16448294	0	-	16441576	16441576	8553170	3	2555,152,450,	0,5303,6268,
#Partially deleted in new
chr17	16442013	16492153	chr17:16442013-16492153	3	-	16443867	16491990	789624	3	2118,129,409,	0,20244,49731,
#Partially deleted in new
chr17	16443260	16492018	chr17:16443260-16492018	1	-	16443587	16491990	789624	4	871,116,129,274,	0,4584,18997,48484,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	16551386	16569169	chr17:16551386-16569169	1	-	16551855	16567731	789624	6	2040,87,127,98,601,420,	0,11759,12312,15138,15942,17363,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	16551386	16569206	chr17:16551386-16569206	3	-	16551855	16567731	789624	6	2040,87,127,98,601,255,	0,11759,12312,15138,15942,17565,
#Partially deleted in new
chr17	16553109	16563264	chr17:16553109-16563264	0	-	16553109	16553109	8553170	2	317,119,	0,10036,
#Partially deleted in new
chr17	16557984	16559269	chr17:16557984-16559269	3	-	16557984	16557984	8553170	2	378,311,	0,974,
#Deleted in new
chr17	16567361	16569204	chr17:16567361-16569204	0	-	16567361	16567361	8553170	2	314,253,	0,1590,
#Deleted in new
chr17	16567559	16569198	chr17:16567559-16569198	0	-	16567559	16567731	789624	3	370,75,247,	0,483,1392,
#Deleted in new
chr17	16567823	16569174	chr17:16567823-16569174	0	-	16567823	16567823	8553170	2	106,474,	0,877,
#Deleted in new
chr17	16616847	16617881	chr17:16616847-16617881	7	-	16616847	16616847	16724991	1	1034,	0,
#Partially deleted in new
chr17	16620736	16653853	chr17:16620736-16653853	3	-	16622287	16649744	789624	6	3773,96,127,66,89,90,	0,13125,13893,26592,28921,33027,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	16620745	16624787	chr17:16620745-16624787	0	-	16620745	16620745	8553170	1	4042,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	16631343	16634647	chr17:16631343-16634647	0	-	16631343	16631343	8553170	3	372,96,18,	0,2518,3286,
#Partially deleted in new
chr17	16633861	16653856	chr17:16633861-16653856	0	-	16633861	16649744	789624	6	96,127,66,89,100,70,	0,768,13467,15796,19706,19925,
#Partially deleted in new
chr17	16633905	16653838	chr17:16633905-16653838	0	-	16633905	16649744	789624	5	52,127,66,89,271,	0,724,13423,15752,19662,
#Deleted in new
chr17	16653903	16654787	chr17:16653903-16654787	3	+	16653903	16653903	8553170	2	67,704,	0,180,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	16666106	16667118	chr17:16666106-16667118	7	-	16666106	16666106	16724991	1	1012,	0,
#Partially deleted in new
chr17	16683437	16684227	chr17:16683437-16684227	7	+	16683437	16683437	16724991	1	790,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	16689536	16695486	chr17:16689536-16695486	0	+	16689536	16689536	8553170	3	657,71,207,	0,3442,5743,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	16690231	16712148	chr17:16690231-16712148	1	+	16690400	16711819	789624	6	513,71,249,71,840,470,	0,2747,14919,17240,18564,21447,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr17	16690240	16777881	chr17:16690240-16777881	1	+	16690400	16773633	789624	17	504,71,249,74,840,137,34,142,214,184,129,954,294,221,211,43,4385,	0,2738,14910,17228,18555,21438,29957,30276,37286,41559,42297,44449,71184,72072,73724,81736,83256,
#Partially deleted in new
chr17	16690240	16708748	chr17:16690240-16708748	0	+	16690240	16690240	8553170	5	504,71,249,74,43,	0,2738,14910,17228,18465,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	16690248	16707398	chr17:16690248-16707398	0	+	16690248	16690248	8553170	3	496,71,2248,	0,2730,14902,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr17	16690260	16804453	chr17:16690260-16804453	3	+	16690400	16773633	789624	26	484,71,249,74,840,137,34,142,214,184,129,954,294,221,211,43,786,111,58,175,201,192,289,421,93,2195,	0,2718,14890,17208,18535,21418,29937,30256,37266,41539,42277,44429,71164,72052,73704,81716,83236,93362,94162,96687,97674,105782,107981,109690,110775,111998,
#Partially deleted in new
chr17	16690315	16731916	chr17:16690315-16731916	1	+	16690400	16731873	789624	11	429,71,249,74,838,139,34,142,214,22,94,	0,2663,14835,17153,18480,21361,29882,30201,37211,41484,41507,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr17	16690324	16774999	chr17:16690324-16774999	0	+	16690400	16734765	789624	16	420,71,249,74,840,137,34,142,214,954,138,294,221,211,43,1503,	0,2654,14826,17144,18471,21354,29873,30192,37202,44365,47213,71100,71988,73640,81652,83172,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr17	16690324	16774999	chr17:16690324-16774999	3	+	16690400	16773529	789624	18	420,71,249,74,840,137,34,142,214,184,129,954,294,221,211,43,110,1503,	0,2654,14826,17144,18471,21354,29873,30192,37202,41475,42213,44365,71100,71988,73640,81652,82275,83172,
#Partially deleted in new
chr17	16690711	16708902	chr17:16690711-16708902	0	+	16690711	16708902	789624	5	33,71,249,74,107,	0,2267,14439,16757,18084,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	16691797	16691907	chr17:16691797-16691907	3	+	16691797	16691797	8553170	1	110,	0,
#Partially deleted in new
chr17	16705283	16709459	chr17:16705283-16709459	0	+	16705283	16705283	8553170	2	116,664,	0,3512,
#Partially deleted in new
chr17	16707513	16764863	chr17:16707513-16764863	0	+	16707513	16707513	8553170	12	29,137,34,142,214,184,129,954,138,294,221,899,	0,4165,12684,13003,20013,24286,25024,27176,30024,53911,54799,56451,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	16710058	16710361	chr17:16710058-16710361	3	+	16710058	16710058	8553170	1	303,	0,
#Partially deleted in new
chr17	16720516	16727895	chr17:16720516-16727895	0	+	16720516	16720516	8553170	3	142,80,369,	0,6543,7010,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	16731216	16767294	chr17:16731216-16767294	0	+	16731216	16731216	8553170	7	767,129,954,294,221,2509,268,	0,1321,3473,30208,31096,32748,35810,
#Partially deleted in new
chr17	16745635	16746761	chr17:16745635-16746761	7	-	16745635	16745635	16724991	1	1126,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	16786488	16798429	chr17:16786488-16798429	5	+	16786488	16786488	16724991	3	634,192,188,	0,9554,11753,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	16786703	16796152	chr17:16786703-16796152	4	+	16786703	16786703	16724991	3	419,201,110,	0,1231,9339,
#Deleted in new
chr17	16787234	16788141	chr17:16787234-16788141	7	-	16787234	16787234	16724991	2	106,163,	0,744,
#Partially deleted in new
chr17	16787758	16801126	chr17:16787758-16801126	4	+	16787758	16787758	16724991	5	377,192,289,421,91,	0,8284,10483,12192,13277,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	16788056	16816540	chr17:16788056-16816540	3	+	16788056	16788056	8553170	11	79,192,289,421,93,258,113,402,169,234,993,	0,7986,10185,11894,12979,14202,16509,20786,21822,24361,27491,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	16788247	16789234	chr17:16788247-16789234	3	-	16788247	16788247	8553170	2	59,627,	0,360,
#Deleted in new
chr17	16788878	16790501	chr17:16788878-16790501	4	+	16788878	16788878	16724991	1	1623,	0,
#Partially deleted in new
chr17	16791662	16796204	chr17:16791662-16796204	4	+	16791662	16791662	16724991	2	391,162,	0,4380,
#Partially deleted in new
chr17	16791976	16800128	chr17:16791976-16800128	4	+	16791976	16791976	16724991	4	77,192,289,178,	0,4066,6265,7974,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	16794465	16801643	chr17:16794465-16801643	4	+	16794465	16794465	16724991	3	1769,289,1693,	0,3776,5485,
#Partially deleted in new
chr17	16794534	16798520	chr17:16794534-16798520	4	+	16794534	16794534	16724991	3	105,192,279,	0,1508,3707,
#Partially deleted in new
chr17	16794593	16798522	chr17:16794593-16798522	4	+	16794593	16794593	16724991	3	65,192,281,	0,1449,3648,
#Partially deleted in new
chr17	16796042	16802427	chr17:16796042-16802427	5	+	16796042	16796042	16724991	5	192,289,421,93,169,	0,2199,3908,4993,6216,
#Partially deleted in new
chr17	16798008	16804455	chr17:16798008-16804455	5	+	16798008	16798008	16724991	4	522,421,93,2197,	0,1942,3027,4250,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	16804626	16805707	chr17:16804626-16805707	3	+	16804626	16804626	8553170	2	52,250,	0,831,
#Deleted in new
chr17	16812446	16812651	chr17:16812446-16812651	7	+	16812446	16812446	16724991	1	205,	0,
#Partially deleted in new
chr17	16817982	16822579	chr17:16817982-16822579	7	-	16817982	16817982	16724991	6	257,583,162,165,97,609,	0,818,1484,1952,2664,3988,
#Deleted in new
chr17	16817991	16819363	chr17:16817991-16819363	4	-	16817991	16817991	16724991	3	248,362,105,	0,809,1267,
#Partially deleted in new
chr17	16818141	16822492	chr17:16818141-16822492	5	-	16818141	16818141	16724991	8	98,48,221,125,162,165,85,522,	0,659,800,1117,1325,1793,2517,3829,
#Partially deleted in new
chr17	16819512	16822128	chr17:16819512-16822128	4	-	16819512	16819512	16724991	4	121,165,125,158,	0,422,1106,2458,
#Deleted in new
chr17	16829998	16832753	chr17:16829998-16832753	7	-	16829998	16829998	16724991	8	95,47,221,126,161,157,83,533,	0,255,396,919,1134,1409,1703,2222,
#Deleted in new
chr17	16831438	16832830	chr17:16831438-16832830	5	-	16831438	16831438	16724991	4	126,83,129,225,	0,263,782,1167,
#Deleted in new
chr17	16840894	16845815	chr17:16840894-16845815	7	-	16840894	16840894	16724991	8	95,23,221,126,162,154,83,435,	0,946,1068,1375,2003,2772,3357,4486,
#Deleted in new
chr17	16841538	16842449	chr17:16841538-16842449	4	-	16841538	16841538	16724991	3	325,221,180,	0,424,731,
#Deleted in new
chr17	16842949	16844570	chr17:16842949-16844570	4	-	16842949	16842949	16724991	3	110,154,319,	0,717,1302,
#Deleted in new
chr17	16843486	16845599	chr17:16843486-16845599	4	-	16843486	16843486	16724991	3	334,83,219,	0,765,1894,
#Deleted in new
chr17	16843864	16845881	chr17:16843864-16845881	5	-	16843864	16843864	16724991	3	46,73,501,	0,387,1516,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	16847634	16848413	chr17:16847634-16848413	5	-	16847634	16847634	16724991	2	304,317,	0,462,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	16847634	16852776	chr17:16847634-16852776	7	-	16847634	16847634	16724991	7	304,149,78,237,884,687,216,	0,462,1365,1550,2035,4090,4926,
#Partially deleted in new
chr17	16847851	16851908	chr17:16847851-16851908	5	-	16847851	16847851	16724991	6	85,52,232,112,157,181,	0,246,1353,1824,2547,3876,
#Partially deleted in new
chr17	16848123	16850358	chr17:16848123-16850358	4	-	16848123	16848123	16724991	4	122,237,115,119,	0,1061,1546,2116,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	16851501	16852777	chr17:16851501-16852777	5	-	16851501	16851501	16724991	3	389,113,217,	0,797,1059,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	16851514	16852662	chr17:16851514-16852662	4	-	16851514	16851514	16724991	3	376,85,102,	0,812,1046,
#Deleted in new
chr17	16853934	16854309	chr17:16853934-16854309	7	+	16853934	16853934	16724991	1	375,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	16861145	16864223	chr17:16861145-16864223	3	+	16861145	16861145	8553170	1	3078,	0,
#Deleted in new
chr17	16893197	16893429	chr17:16893197-16893429	7	-	16893197	16893197	16724991	1	232,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	16922914	16934839	chr17:16922914-16934839	7	-	16922914	16922914	16724991	14	1467,150,292,66,85,119,104,473,100,83,76,151,1467,205,	0,2415,2931,3509,3954,4763,6301,6606,7394,9256,9515,9872,10150,11720,
#Partially deleted in new
chr17	16923995	16932505	chr17:16923995-16932505	5	-	16923995	16923995	16724991	12	386,150,292,66,97,119,85,104,79,36,83,76,	0,1334,1850,2428,2873,3682,4796,5220,5834,6377,8175,8434,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	16929280	16932792	chr17:16929280-16932792	4	-	16929280	16929280	16724991	5	39,888,83,76,6,	0,240,2890,3149,3506,
#Partially deleted in new
chr17	16929815	16972087	chr17:16929815-16972087	0	-	16933064	16972075	789624	10	93,100,83,76,155,112,142,186,246,73,	0,493,2355,2614,2967,3249,9840,10510,18922,42199,
#Partially deleted in new
chr17	16932732	16972117	chr17:16932732-16972117	0	-	16932732	16932732	8553170	3	205,246,103,	0,16005,39282,
#Partially deleted in new
chr17	16933064	16972118	chr17:16933064-16972118	1	-	16933150	16972075	789624	4	112,246,138,104,	0,15673,19381,38950,
#Partially deleted in new
chr17	16939084	16972088	chr17:16939084-16972088	3	-	16939546	16972075	0	5	713,186,246,138,74,	0,1241,9653,13361,32930,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	16939084	16941062	chr17:16939084-16941062	0	-	16939084	16939084	8553170	1	1978,	0,
#Partially deleted in new
chr17	16939443	16972087	chr17:16939443-16972087	1	-	16939546	16972075	0	4	354,186,246,73,	0,882,9294,32571,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	16940505	16972078	chr17:16940505-16972078	0	-	16940505	16940505	8553170	4	972,246,138,64,	0,8232,11940,31509,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	16975998	16981353	chr17:16975998-16981353	3	-	16975998	16975998	789624	3	1632,516,53,	0,4202,5302,
#Partially deleted in new
chr17	16988328	16990177	chr17:16988328-16990177	3	+	16988328	16988328	789624	3	195,136,69,	0,586,1780,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	17011913	17014990	chr17:17011913-17014990	3	-	17011913	17011913	8553170	1	3077,	0,
#Partially deleted in new
chr17	17042544	17126853	chr17:17042544-17126853	0	+	17042848	17126853	789624	5	52,165,78,66,152,	0,262,33165,35466,84157,
#Partially deleted in new
chr17	17042759	17057950	chr17:17042759-17057950	1	+	17042848	17057704	789624	2	212,315,	0,14876,
#Partially deleted in new
chr17	17042759	17097337	chr17:17042759-17097337	0	+	17042759	17042759	8553170	4	212,78,66,570,	0,32950,35251,54008,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr17	17042759	17192648	chr17:17042759-17192648	1	+	17042848	17184894	789624	23	212,78,66,152,85,232,160,139,114,57,69,90,110,571,117,148,118,160,120,87,163,86,7826,	0,32950,35251,83942,88857,93459,95156,99867,100796,103276,104559,107384,111546,115672,118480,128958,129938,131156,132533,133666,134490,137243,142063,
#Partially deleted in new
chr17	17042848	17185560	chr17:17042848-17185560	3	+	17042848	17180639	789624	24	123,78,66,152,85,232,160,139,114,57,69,90,110,571,117,148,118,160,120,87,163,86,63,738,	0,32861,35162,83853,88768,93370,95067,99778,100707,103187,104470,107295,111457,115583,118391,128869,129849,131067,132444,133577,134401,137154,137758,141974,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	17076037	17077752	chr17:17076037-17077752	3	-	17076037	17076037	8553170	2	361,697,	0,1018,
#Partially deleted in new
chr17	17131616	17138419	chr17:17131616-17138419	0	+	17131616	17131616	8553170	3	85,232,173,	0,4602,6630,
#Partially deleted in new
chr17	17131665	17185554	chr17:17131665-17185554	0	+	17131665	17184894	789624	18	36,232,160,139,57,69,90,110,571,117,148,118,160,120,87,163,86,732,	0,4553,6250,10961,14370,15653,18478,22640,26766,29574,40052,41032,42250,43627,44760,45584,48337,53157,
#Partially deleted in new
chr17	17136337	17143669	chr17:17136337-17143669	0	+	17136337	17143669	789624	4	113,514,139,114,	0,1578,6289,7218,
#Deleted in new
chr17	17141494	17142312	chr17:17141494-17142312	0	+	17141494	17141494	8553170	2	266,303,	0,515,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	17149759	17158715	chr17:17149759-17158715	0	+	17149759	17149759	8553170	3	474,110,284,	0,4546,8672,
#Partially deleted in new
chr17	17154351	17185235	chr17:17154351-17185235	0	+	17154351	17184883	789624	2	64,374,	0,30510,
#Partially deleted in new
chr17	17158496	17185560	chr17:17158496-17185560	0	+	17158496	17184894	789624	11	506,117,3807,148,118,160,120,87,163,86,738,	0,2743,5612,13221,14201,15419,16796,17929,18753,21506,26326,
#Partially deleted in new
chr17	17165555	17185560	chr17:17165555-17185560	0	+	17165555	17180639	789624	10	2360,148,118,160,120,87,163,86,63,738,	0,6162,7142,8360,9737,10870,11694,14447,15051,19267,
#Partially deleted in new
chr17	17167945	17185554	chr17:17167945-17185554	3	-	17167945	17167945	8553170	2	1164,67,	0,17542,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	17170082	17170189	chr17:17170082-17170189	3	+	17170082	17170082	8553170	1	107,	0,
#Deleted in new
chr17	17170859	17171842	chr17:17170859-17171842	0	+	17170859	17170859	8553170	2	631,125,	0,858,
#Partially deleted in new
chr17	17171719	17184976	chr17:17171719-17184976	0	+	17171719	17184894	789624	7	146,118,160,87,163,86,154,	0,978,2196,4706,5530,8283,13103,
#Partially deleted in new
chr17	17172720	17177396	chr17:17172720-17177396	0	+	17172720	17172720	8553170	3	95,87,147,	0,3705,4529,
#Partially deleted in new
chr17	17175363	17217679	chr17:17175363-17217679	0	+	17175363	17201616	789624	6	49,87,163,86,176,190,	0,1062,1886,4639,26094,42126,
#Partially deleted in new
chr17	17177251	17180150	chr17:17177251-17180150	0	+	17177251	17180127	789624	2	161,148,	0,2751,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	17178413	17178749	chr17:17178413-17178749	3	+	17178413	17178413	8553170	1	336,	0,
#Partially deleted in new
chr17	17179557	17185560	chr17:17179557-17185560	0	+	17179557	17184894	789624	3	20,86,738,	0,445,5265,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	17181503	17183257	chr17:17181503-17183257	3	+	17181503	17181503	8553170	1	1754,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	17186464	17189500	chr17:17186464-17189500	0	+	17186464	17186464	8553170	2	184,260,	0,2776,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	17200994	17206315	chr17:17200994-17206315	3	-	17202766	17206286	789624	2	2104,456,	0,4865,
#Partially deleted in new
chr17	17202648	17237185	chr17:17202648-17237185	3	-	17217078	17228137	789624	12	450,37,45,106,132,124,114,36,172,89,114,274,	0,1744,4376,12336,12536,13731,14420,16370,25341,29145,30139,34263,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	17212211	17237139	chr17:17212211-17237139	3	-	17213654	17228137	0	14	1645,106,132,124,114,191,92,161,222,147,273,89,114,228,	0,2773,2973,4168,4857,6807,9325,10289,11710,13964,15677,19582,20576,24700,
#Partially deleted in new
chr17	17216971	17219103	chr17:17216971-17219103	0	-	17216971	17216971	8553170	2	211,85,	0,2047,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	17219566	17223122	chr17:17219566-17223122	0	-	17219566	17219566	8553170	2	2062,622,	0,2934,
#Partially deleted in new
chr17	17221170	17237139	chr17:17221170-17237139	1	-	17221378	17228137	0	8	458,161,222,147,273,89,114,228,	0,1330,2751,5005,6718,10623,11617,15741,
#Partially deleted in new
chr17	17221587	17224505	chr17:17221587-17224505	0	-	17221587	17221587	8553170	3	41,161,584,	0,913,2334,
#Partially deleted in new
chr17	17223921	17237182	chr17:17223921-17237182	0	-	17223921	17227978	789624	4	222,147,117,271,	0,2254,3967,12990,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	17224552	17229477	chr17:17224552-17229477	0	-	17224552	17224552	8553170	2	1770,1589,	0,3336,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	17224552	17237188	chr17:17224552-17237188	0	-	17224552	17224552	8553170	5	1770,273,89,114,277,	0,3336,7241,8235,12359,
#Partially deleted in new
chr17	17228025	17228729	chr17:17228025-17228729	0	-	17228025	17228137	789624	2	136,107,	0,597,
#Deleted in new
chr17	17231523	17232812	chr17:17231523-17232812	0	-	17231523	17231523	8553170	2	359,25,	0,1264,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	17235432	17236118	chr17:17235432-17236118	3	-	17235432	17235432	8553170	1	686,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	17242009	17242886	chr17:17242009-17242886	7	+	17242009	17242009	16724991	1	877,	0,
#Partially deleted in new
chr17	17246819	17280777	chr17:17246819-17280777	1	-	17247097	17276159	0	12	332,81,114,87,174,141,180,93,50,113,130,204,	0,660,2106,8039,13481,15146,17982,21065,23938,24076,29215,33754,
#Partially deleted in new
chr17	17246834	17247887	chr17:17246834-17247887	0	-	17246834	17246834	8553170	2	317,408,	0,645,
#Partially deleted in new
chr17	17246834	17249027	chr17:17246834-17249027	0	-	17247097	17249027	789624	2	317,102,	0,2091,
#Partially deleted in new
chr17	17246835	17281293	chr17:17246835-17281293	3	-	17247097	17281186	0	12	316,81,114,87,174,141,180,93,50,113,130,162,	0,644,2090,8023,13465,15130,17966,21049,23922,24060,29199,34296,
#Partially deleted in new
chr17	17246836	17281191	chr17:17246836-17281191	0	-	17276142	17281186	789624	12	315,81,114,87,174,141,180,161,50,113,149,60,	0,643,2089,8022,13464,15129,17965,21048,23921,24059,29198,34295,
#Partially deleted in new
chr17	17246873	17280700	chr17:17246873-17280700	1	-	17247097	17276159	789624	11	278,81,114,87,141,180,93,50,113,130,127,	0,606,2052,7985,15092,17928,21011,23884,24022,29161,33700,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	17248948	17255055	chr17:17248948-17255055	0	-	17248948	17248948	8553170	2	91,197,	0,5910,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	17254886	17260696	chr17:17254886-17260696	0	-	17254886	17254886	8553170	2	59,396,	0,5414,
#Partially deleted in new
chr17	17260301	17276066	chr17:17260301-17276066	0	-	17260301	17260301	8553170	6	173,141,180,161,251,32,	0,1664,4500,7583,10456,15733,
#Partially deleted in new
chr17	17260304	17281186	chr17:17260304-17281186	0	-	17271000	17281186	789624	6	170,141,180,93,113,55,	0,1661,4497,7580,10591,20827,
#Partially deleted in new
chr17	17260397	17281273	chr17:17260397-17281273	0	-	17267951	17281186	789624	7	77,141,180,93,113,130,142,	0,1568,4404,7487,10498,15637,20734,
#Partially deleted in new
chr17	17261965	17270976	chr17:17261965-17270976	0	-	17261965	17270976	789624	4	141,93,50,81,	0,5919,8792,8930,
#Partially deleted in new
chr17	17261997	17281246	chr17:17261997-17281246	0	-	17276142	17281186	789624	7	109,180,93,50,113,149,115,	0,2804,5887,8760,8898,14037,19134,
#Partially deleted in new
chr17	17262019	17281246	chr17:17262019-17281246	0	-	17268042	17281186	789624	6	87,161,50,113,130,115,	0,5865,8738,8876,14015,19112,
#Partially deleted in new
chr17	17262045	17281273	chr17:17262045-17281273	0	-	17271000	17281186	789624	6	61,180,93,50,113,142,	0,2756,5839,8712,8850,19086,
#Partially deleted in new
chr17	17264859	17270807	chr17:17264859-17270807	0	-	17268042	17270807	789624	3	122,161,50,	0,3025,5898,
#Partially deleted in new
chr17	17264933	17281160	chr17:17264933-17281160	0	-	17264933	17264933	8553170	5	48,93,251,130,29,	0,2951,5824,11101,16198,
#Partially deleted in new
chr17	17303334	17347661	chr17:17303334-17347661	3	+	17303550	17346947	0	5	483,101,61,115,857,	0,3208,19850,41459,43470,
#Partially deleted in new
chr17	17303334	17347661	chr17:17303334-17347661	1	+	17303550	17346947	789624	5	483,101,61,133,857,	0,3208,19850,41459,43470,
#Partially deleted in new
chr17	17303365	17344866	chr17:17303365-17344866	0	+	17303550	17303892	789624	4	536,101,61,73,	0,3177,19819,41428,
#Partially deleted in new
chr17	17303389	17346858	chr17:17303389-17346858	0	+	17303550	17304378	789624	6	428,118,101,61,133,54,	0,974,3153,19795,41404,43415,
#Partially deleted in new
chr17	17303677	17347663	chr17:17303677-17347663	0	+	17303677	17304378	789624	6	140,114,101,61,133,859,	0,686,2865,19507,41116,43127,
#Partially deleted in new
chr17	17345268	17347152	chr17:17345268-17347152	0	+	17345268	17345268	8553170	2	44,348,	0,1536,
#Deleted in new
chr17	17383376	17384012	chr17:17383376-17384012	7	-	17383376	17383376	16724991	1	636,	0,
#Deleted in new
chr17	17422680	17423704	chr17:17422680-17423704	7	+	17422680	17422680	16724991	1	1024,	0,
#Partially deleted in new
chr17	17456426	17457259	chr17:17456426-17457259	7	+	17456426	17456426	16724991	2	157,358,	0,475,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	17460443	17460522	chr17:17460443-17460522	3	+	17460443	17460443	8553170	1	79,	0,
#Partially deleted in new
chr17	17476985	17493226	chr17:17476985-17493226	3	+	17477041	17491495	789624	2	280,1948,	0,14293,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	17476993	17485592	chr17:17476993-17485592	1	+	17477041	17485324	789624	2	272,293,	0,8306,
#Deleted in new
chr17	17477005	17477684	chr17:17477005-17477684	0	+	17477005	17477005	8553170	1	679,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	17477024	17491471	chr17:17477024-17491471	0	+	17477041	17485324	789624	3	241,134,193,	0,8275,14254,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	17485021	17488372	chr17:17485021-17488372	0	+	17485021	17485021	8553170	1	3351,	0,
#Deleted in new
chr17	17494436	17496393	chr17:17494436-17496393	3	-	17495124	17496181	789624	2	1248,498,	0,1459,
#Deleted in new
chr17	17494706	17496395	chr17:17494706-17496395	1	-	17495527	17496181	789624	2	904,500,	0,1189,
#Partially deleted in new
chr17	17505562	17591700	chr17:17505562-17591700	3	-	17505790	17591626	789624	7	286,75,112,146,116,108,170,	0,664,3871,6946,16717,71357,85968,
#Partially deleted in new
chr17	17505562	17577465	chr17:17505562-17577465	1	-	17505790	17577012	789624	7	286,75,112,146,116,108,52,	0,664,3871,6946,16717,71357,71851,
#Partially deleted in new
chr17	17505562	17582431	chr17:17505562-17582431	1	-	17505790	17577012	789624	7	286,75,112,146,116,108,165,	0,664,3871,6946,16717,71357,76704,
#Partially deleted in new
chr17	17505562	17591679	chr17:17505562-17591679	1	-	17505833	17591626	789624	8	286,75,34,112,146,116,108,83,	0,664,1606,3871,6946,16717,71357,86034,
#Partially deleted in new
chr17	17505562	17518157	chr17:17505562-17518157	0	-	17505562	17505562	8553170	5	286,75,112,146,184,	0,664,3871,6946,12411,
#Partially deleted in new
chr17	17505562	17519080	chr17:17505562-17519080	0	-	17505562	17505562	8553170	5	286,75,112,146,54,	0,664,3871,6946,13464,
#Deleted in new
chr17	17505562	17506323	chr17:17505562-17506323	0	-	17505562	17505562	8553170	2	286,97,	0,664,
#Partially deleted in new
chr17	17505564	17591708	chr17:17505564-17591708	1	-	17505833	17591626	789624	8	284,75,31,112,146,116,108,178,	0,662,1604,3869,6944,16715,71355,85966,
#Deleted in new
chr17	17505565	17507056	chr17:17505565-17507056	0	-	17505565	17505565	8553170	3	283,75,72,	0,661,1419,
#Partially deleted in new
chr17	17505588	17591683	chr17:17505588-17591683	0	-	17509509	17591626	789624	5	260,75,112,108,153,	0,638,3845,71331,85942,
#Deleted in new
chr17	17507350	17508308	chr17:17507350-17508308	3	+	17507350	17507350	8553170	2	267,528,	0,430,
#Partially deleted in new
chr17	17508783	17591650	chr17:17508783-17591650	0	-	17508783	17508783	8553170	6	60,112,146,116,108,120,	0,650,3725,13496,68136,82747,
#Partially deleted in new
chr17	17509433	17591703	chr17:17509433-17591703	0	-	17509433	17509433	8553170	4	112,146,108,107,	0,3075,67486,82163,
#Partially deleted in new
chr17	17512513	17591700	chr17:17512513-17591700	0	-	17522361	17591626	789624	5	141,116,56,108,170,	0,9766,52737,64406,79017,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	17591427	17610485	chr17:17591427-17610485	3	+	17591427	17591427	8553170	2	275,150,	0,18908,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	17616042	17617745	chr17:17616042-17617745	3	+	17616042	17616042	8553170	1	1703,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	17674025	17677688	chr17:17674025-17677688	3	-	17674025	17674025	789624	4	131,157,162,114,	0,1340,2184,3549,
#Deleted in new
chr17	17675365	17675522	chr17:17675365-17675522	3	+	17675365	17675365	8553170	1	157,	0,
#Deleted in new
chr17	17676210	17676371	chr17:17676210-17676371	3	+	17676210	17676210	8553170	1	161,	0,
#Partially deleted in new
chr17	17681472	17811453	chr17:17681472-17811453	3	+	17792948	17809981	789624	6	321,132,5581,94,50,1484,	0,42555,111460,122283,127917,128497,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	17681728	17685050	chr17:17681728-17685050	0	+	17681728	17681728	8553170	2	65,1505,	0,1817,
#Partially deleted in new
chr17	17682494	17793143	chr17:17682494-17793143	0	+	17792948	17793143	789624	4	69,158,132,211,	0,1051,41533,110438,
#Partially deleted in new
chr17	17759153	17770821	chr17:17759153-17770821	3	-	17759153	17759153	789624	3	233,485,6,	0,6664,11662,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	17776685	17779529	chr17:17776685-17779529	3	-	17776685	17776685	789624	1	2844,	0,
#Partially deleted in new
chr17	17777780	17779094	chr17:17777780-17779094	3	+	17777780	17777780	8553170	2	86,380,	0,934,
#Partially deleted in new
chr17	17782131	17795776	chr17:17782131-17795776	0	+	17792948	17795776	789624	2	84,2844,	0,10801,
#Deleted in new
chr17	17792948	17798513	chr17:17792948-17798513	1	+	17792948	17798513	789624	8	616,17,519,9,2942,965,2,102,	0,681,699,1292,1302,4439,5460,5463,
#Partially deleted in new
chr17	17798383	17804114	chr17:17798383-17804114	0	+	17798383	17804094	789624	2	130,359,	0,5372,
#Deleted in new
chr17	17809281	17810689	chr17:17809281-17810689	0	+	17809281	17809281	8553170	2	158,720,	0,688,
#Partially deleted in new
chr17	17810398	17813769	chr17:17810398-17813769	0	-	17812036	17813769	789624	5	114,719,84,112,201,	0,613,1574,2969,3170,
#Partially deleted in new
chr17	17811355	17813442	chr17:17811355-17813442	0	-	17812036	17813442	789624	3	429,84,75,	0,617,2012,
#Partially deleted in new
chr17	17812072	17837002	chr17:17812072-17837002	3	-	17812621	17836817	0	19	779,112,201,166,133,110,109,169,167,262,179,202,221,115,222,135,188,432,276,	0,1295,1496,2172,2542,2762,3148,3787,4134,4384,4885,5183,5623,6187,6940,7247,7465,8017,24654,
#Partially deleted in new
chr17	17812072	17836987	chr17:17812072-17836987	1	-	17812621	17836817	0	20	779,112,201,166,133,110,109,169,167,262,179,202,221,115,222,135,188,432,90,261,	0,1295,1496,2172,2542,2762,3148,3787,4134,4384,4885,5183,5623,6187,6940,7247,7465,8017,11445,24654,
#Partially deleted in new
chr17	17812072	17820864	chr17:17812072-17820864	0	-	17817582	17819403	789624	18	779,112,201,166,133,110,109,169,167,262,179,202,44,221,115,222,135,1327,	0,1295,1496,2172,2542,2762,3148,3787,4134,4384,4885,5183,5475,5623,6187,6940,7247,7465,
#Partially deleted in new
chr17	17812072	17818327	chr17:17812072-17818327	0	-	17817644	17818327	789624	14	779,112,201,166,133,110,109,169,167,262,179,202,369,68,	0,1295,1496,2172,2542,2762,3148,3787,4134,4384,4885,5183,5475,6187,
#Partially deleted in new
chr17	17812072	17819951	chr17:17812072-17819951	1	-	17812621	17819403	789624	17	779,112,201,166,133,110,109,169,167,262,179,202,221,115,222,135,414,	0,1295,1496,2172,2542,2762,3148,3787,4134,4384,4885,5183,5623,6187,6940,7247,7465,
#Partially deleted in new
chr17	17812711	17814376	chr17:17812711-17814376	0	-	17812711	17814376	789624	3	140,201,132,	0,857,1533,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	17812909	17814355	chr17:17812909-17814355	0	-	17813299	17814355	789624	3	570,201,111,	0,659,1335,
#Deleted in new
chr17	17813479	17813545	chr17:17813479-17813545	3	-	17813479	17813479	5263520	1	66,	0,
#Deleted in new
chr17	17813835	17813931	chr17:17813835-17813931	3	-	17813835	17813835	5263520	1	96,	0,
#Deleted in new
chr17	17814343	17816395	chr17:17814343-17816395	0	-	17814343	17814343	8553170	5	67,110,109,169,189,	0,491,877,1516,1863,
#Deleted in new
chr17	17814402	17815373	chr17:17814402-17815373	0	-	17814402	17814402	8553170	2	542,153,	0,818,
#Deleted in new
chr17	17814615	17816384	chr17:17814615-17816384	0	-	17814615	17814615	8553170	5	132,110,109,169,178,	0,219,605,1244,1591,
#Deleted in new
chr17	17815596	17816338	chr17:17815596-17816338	0	-	17815596	17815596	8553170	2	432,132,	0,610,
#Deleted in new
chr17	17816456	17817750	chr17:17816456-17817750	0	-	17816456	17816456	8553170	3	262,179,495,	0,501,799,
#Deleted in new
chr17	17816524	17818742	chr17:17816524-17818742	0	-	17816524	17816524	8553170	6	194,179,202,44,221,483,	0,433,731,1023,1171,1735,
#Deleted in new
chr17	17817122	17817900	chr17:17817122-17817900	0	-	17817122	17817122	8553170	2	335,205,	0,573,
#Deleted in new
chr17	17817423	17818149	chr17:17817423-17818149	0	-	17817423	17817423	8553170	2	28,454,	0,272,
#Deleted in new
chr17	17817525	17818345	chr17:17817525-17818345	0	-	17817525	17817525	8553170	2	391,86,	0,734,
#Deleted in new
chr17	17818222	17819234	chr17:17818222-17819234	0	-	17818222	17818222	8553170	2	152,222,	0,790,
#Deleted in new
chr17	17819026	17823618	chr17:17819026-17823618	0	-	17819026	17823536	789624	5	208,135,182,432,101,	0,293,517,1063,4491,
#Deleted in new
chr17	17819071	17823604	chr17:17819071-17823604	0	-	17819071	17819071	8553170	5	163,135,78,117,87,	0,248,466,1333,4446,
#Deleted in new
chr17	17819120	17820510	chr17:17819120-17820510	0	-	17819120	17819403	789624	4	114,135,99,188,	0,199,417,1202,
#Deleted in new
chr17	17820007	17823594	chr17:17820007-17823594	0	-	17820007	17820007	8553170	2	514,77,	0,3510,
#Partially deleted in new
chr17	17843510	17972410	chr17:17843510-17972410	1	-	17847634	17972313	789624	14	4273,37,60,76,118,124,49,134,117,159,135,79,85,149,	0,5312,7382,17965,19220,22785,23365,25829,36116,39194,41123,55085,63936,128751,
#Partially deleted in new
chr17	17846824	17972397	chr17:17846824-17972397	3	-	17847634	17972313	789624	15	959,37,60,76,118,124,49,134,117,159,135,150,79,85,136,	0,1998,4068,14651,15906,19471,20051,22515,32802,35880,37809,46836,51771,60622,125437,
#Partially deleted in new
chr17	17846824	17872064	chr17:17846824-17872064	1	-	17847634	17869449	789624	9	959,37,60,76,118,124,49,575,100,	0,1998,4068,14651,15906,19471,20051,22515,25140,
#Partially deleted in new
chr17	17846848	17972397	chr17:17846848-17972397	1	-	17847634	17972313	789624	14	935,37,60,76,118,124,49,134,117,159,150,79,85,136,	0,1974,4044,14627,15882,19447,20027,22491,32778,35856,46812,51747,60598,125413,
#Deleted in new
chr17	17847333	17848949	chr17:17847333-17848949	0	-	17847333	17847333	8553170	2	450,127,	0,1489,
#Partially deleted in new
chr17	17847348	17972404	chr17:17847348-17972404	1	-	17847634	17972313	789624	14	435,37,60,76,118,124,49,134,117,159,150,79,85,143,	0,1474,3544,14127,15382,18947,19527,21991,32278,35356,46312,51247,60098,124913,
#Partially deleted in new
chr17	17847445	17972420	chr17:17847445-17972420	1	-	17847634	17972313	789624	15	338,37,60,87,76,118,124,49,134,117,135,150,79,85,159,	0,1377,3447,10323,14030,15285,18850,19430,21894,32181,37188,46215,51150,60001,124816,
#Partially deleted in new
chr17	17847468	17972397	chr17:17847468-17972397	1	-	17847634	17972313	789624	12	315,37,76,118,124,49,134,117,150,79,85,136,	0,1354,14007,15262,18827,19407,21871,32158,46192,51127,59978,124793,
#Deleted in new
chr17	17847551	17851303	chr17:17847551-17851303	0	-	17847551	17847551	8553170	3	232,37,411,	0,1271,3341,
#Partially deleted in new
chr17	17847568	17972400	chr17:17847568-17972400	1	-	17847634	17972313	789624	13	215,37,60,87,76,118,124,49,134,117,79,85,139,	0,1254,3324,10200,13907,15162,18727,19307,21771,32058,51027,59878,124693,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	17858226	17860041	chr17:17858226-17860041	3	+	17858226	17858226	8553170	1	1815,	0,
#Deleted in new
chr17	17861902	17862780	chr17:17861902-17862780	0	-	17862357	17862780	789624	2	525,50,	0,828,
#Partially deleted in new
chr17	17863273	17872058	chr17:17863273-17872058	0	-	17863273	17863273	8553170	5	137,124,49,134,94,	0,3022,3602,6066,8691,
#Partially deleted in new
chr17	17868964	17972397	chr17:17868964-17972397	0	-	17868964	17868964	8553170	7	509,117,159,135,79,85,136,	0,10662,13740,15669,29631,38482,103297,
#Partially deleted in new
chr17	17893677	17972422	chr17:17893677-17972422	0	-	17893677	17907484	789624	4	133,79,80,161,	0,4918,13769,78584,
#Partially deleted in new
chr17	17972812	18016873	chr17:17972812-18016873	1	+	17977598	18016671	789624	14	162,111,177,117,167,147,120,111,177,132,72,123,132,316,	0,1039,4769,11015,15119,19952,21486,22186,24645,31550,33370,34212,43251,43745,
#Partially deleted in new
chr17	17972812	17983858	chr17:17972812-17983858	0	+	17977598	17983858	789624	5	162,111,177,60,31,	0,1039,4769,8419,11015,
#Partially deleted in new
chr17	17972872	17988049	chr17:17972872-17988049	0	+	17977598	17988049	789624	5	102,37,177,117,118,	0,1053,4709,10955,15059,
#Partially deleted in new
chr17	17972884	18016889	chr17:17972884-18016889	3	+	17977598	18016671	789624	14	90,111,177,117,167,147,120,113,175,132,71,124,132,332,	0,967,4697,10943,15047,19880,21414,22114,24575,31478,33298,34139,43179,43673,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	17972886	17977753	chr17:17972886-17977753	0	+	17977598	17977753	789624	3	88,298,172,	0,778,4695,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	17972888	18007721	chr17:17972888-18007721	1	+	17977598	18007445	789624	14	86,89,111,177,117,167,147,120,111,177,132,71,124,324,	0,776,963,4693,10939,15043,19876,21410,22110,24569,31474,33294,34135,34509,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	17972902	18016859	chr17:17972902-18016859	0	+	17972902	17972902	8553170	11	72,111,177,117,167,1654,113,175,2785,132,302,	0,949,4679,10925,15029,19862,22096,24557,31460,43161,43655,
#Partially deleted in new
chr17	17972917	17988070	chr17:17972917-17988070	0	+	17977598	17988070	789624	4	57,177,117,139,	0,4664,10910,15014,
#Partially deleted in new
chr17	17972936	18007828	chr17:17972936-18007828	1	+	17977598	18007445	789624	13	38,111,177,117,167,147,120,113,175,132,71,124,431,	0,915,4645,10891,14995,19828,21362,22062,24523,31426,33246,34087,34461,
#Partially deleted in new
chr17	17972961	17987961	chr17:17972961-17987961	0	+	17977598	17987961	789624	5	138,111,177,117,30,	0,890,4620,10866,14970,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	17972966	17973883	chr17:17972966-17973883	0	+	17972966	17972966	8553170	3	133,87,32,	0,698,885,
#Partially deleted in new
chr17	17977408	18039168	chr17:17977408-18039168	0	-	18024656	18039013	789624	7	568,122,96,81,98,45,288,	0,10977,12088,47215,48910,51206,61472,
#Deleted in new
chr17	17981191	17981572	chr17:17981191-17981572	7	-	17981191	17981191	16724991	1	381,	0,
#Partially deleted in new
chr17	17992764	18016651	chr17:17992764-18016651	0	+	17992764	17992998	789624	6	325,132,71,124,132,94,	0,11598,13418,14259,23299,23793,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	17992853	17994348	chr17:17992853-17994348	0	+	17992853	17992853	8553170	2	491,50,	0,1445,
#Partially deleted in new
chr17	17994354	18004451	chr17:17994354-18004451	0	+	17994354	17995647	789624	5	64,97,153,183,89,	0,644,1252,3097,10008,
#Deleted in new
chr17	18006879	18007934	chr17:18006879-18007934	0	+	18006879	18006879	8553170	2	268,537,	0,518,
#Deleted in new
chr17	18007023	18007827	chr17:18007023-18007827	0	+	18007023	18007445	789624	3	124,63,242,	0,374,562,
#Partially deleted in new
chr17	18010642	18011822	chr17:18010642-18011822	7	+	18010642	18010642	16724991	2	296,557,	0,623,
#Partially deleted in new
chr17	18015058	18039075	chr17:18015058-18039075	2	-	18024656	18039013	789624	6	1202,116,81,98,45,195,	0,6064,9565,11260,13556,23822,
#Deleted in new
chr17	18015726	18016889	chr17:18015726-18016889	0	+	18015726	18015726	8553170	3	210,132,332,	0,337,831,
#Deleted in new
chr17	18015810	18016859	chr17:18015810-18016859	0	+	18015810	18015810	8553170	2	385,302,	0,747,
#Partially deleted in new
chr17	18016206	18039168	chr17:18016206-18039168	1	-	18024656	18039013	789624	5	54,81,98,45,288,	0,8417,10112,12408,22674,
#Partially deleted in new
chr17	18018009	18039168	chr17:18018009-18039168	1	-	18018548	18039013	789624	8	677,116,113,81,98,146,45,288,	0,3113,3735,6614,8309,10222,10605,20871,
#Partially deleted in new
chr17	18018261	18021264	chr17:18018261-18021264	0	-	18018261	18018261	8553170	2	425,142,	0,2861,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	18018261	18025631	chr17:18018261-18025631	0	-	18018261	18018261	8553170	4	425,116,113,1008,	0,2861,3483,6362,
#Partially deleted in new
chr17	18018263	18024671	chr17:18018263-18024671	0	-	18018556	18024671	789624	2	423,48,	0,6360,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	18018647	18025340	chr17:18018647-18025340	0	-	18018647	18018647	8553170	6	39,116,242,113,81,90,	0,2475,2774,3097,5976,6603,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	18020695	18021794	chr17:18020695-18021794	0	-	18020695	18020695	8553170	3	303,541,50,	0,427,1049,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	18020729	18026535	chr17:18020729-18026535	0	-	18020729	18020729	8553170	5	269,116,113,81,217,	0,393,1015,3894,5589,
#Partially deleted in new
chr17	18021744	18039209	chr17:18021744-18039209	0	-	18021744	18039013	789624	7	113,81,98,146,45,170,32,	0,2879,4574,6487,6870,17136,17433,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	18026071	18026771	chr17:18026071-18026771	3	-	18026071	18026071	8553170	1	700,	0,
#Partially deleted in new
chr17	18027970	18039164	chr17:18027970-18039164	0	-	18027970	18027970	8553170	4	76,146,45,284,	0,261,644,10910,
#Partially deleted in new
chr17	18028110	18039201	chr17:18028110-18039201	0	-	18028110	18028110	8553170	3	267,45,321,	0,504,10770,
#Partially deleted in new
chr17	18039291	18068404	chr17:18039291-18068404	3	+	18039464	18065243	0	6	611,60,108,102,131,3225,	0,5855,14835,19576,22553,25888,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	18039444	18057467	chr17:18039444-18057467	1	+	18039464	18057026	789624	4	458,60,108,765,	0,5702,14682,17258,
#Partially deleted in new
chr17	18054135	18062183	chr17:18054135-18062183	0	+	18054135	18061979	789624	3	99,102,339,	0,4732,7709,
#Partially deleted in new
chr17	18054147	18065283	chr17:18054147-18065283	0	+	18054147	18065243	789624	5	87,57,102,131,104,	0,2555,4720,7697,11032,
#Deleted in new
chr17	18066088	18067966	chr17:18066088-18067966	0	+	18066088	18066088	8553170	2	355,115,	0,1763,
#Partially deleted in new
chr17	18087885	18107971	chr17:18087885-18107971	3	+	18088023	18107240	789624	13	202,161,90,61,91,73,91,98,77,89,59,54,818,	0,5927,10384,11131,11747,12477,12683,13607,14035,15915,16737,18547,19268,
#Partially deleted in new
chr17	18087891	18099210	chr17:18087891-18099210	0	+	18087891	18087891	8553170	4	196,161,90,194,	0,5921,10378,11125,
#Partially deleted in new
chr17	18087920	18099937	chr17:18087920-18099937	0	+	18088023	18098322	789624	5	167,156,90,77,305,	0,5892,10349,11096,11712,
#Partially deleted in new
chr17	18087924	18107959	chr17:18087924-18107959	1	+	18088023	18107193	789624	13	163,161,90,61,91,73,91,98,77,89,59,38,806,	0,5888,10345,11092,11708,12438,12644,13568,13996,15876,16698,18508,19229,
#Partially deleted in new
chr17	18087926	18098482	chr17:18087926-18098482	0	+	18087926	18087926	8553170	3	161,161,213,	0,5886,10343,
#Partially deleted in new
chr17	18087940	18103807	chr17:18087940-18103807	0	+	18088023	18098322	789624	9	147,156,90,61,803,91,98,77,7,	0,5872,10329,11076,11692,12628,13552,13980,15860,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	18087948	18099662	chr17:18087948-18099662	0	+	18088023	18099662	789624	6	139,161,69,90,61,30,	0,5864,7472,10321,11068,11684,
#Partially deleted in new
chr17	18087960	18094280	chr17:18087960-18094280	0	+	18087960	18087960	8553170	2	127,468,	0,5852,
#Partially deleted in new
chr17	18087961	18099221	chr17:18087961-18099221	0	+	18087961	18087961	8553170	4	126,156,90,205,	0,5851,10308,11055,
#Partially deleted in new
chr17	18087964	18099050	chr17:18087964-18099050	0	+	18088023	18091922	789624	5	123,157,161,90,34,	0,3953,5848,10305,11052,
#Partially deleted in new
chr17	18087965	18107927	chr17:18087965-18107927	0	+	18088023	18101928	789624	13	122,161,90,61,91,73,91,96,77,89,59,54,774,	0,5847,10304,11051,11667,12397,12603,13529,13955,15835,16657,18467,19188,
#Partially deleted in new
chr17	18087967	18107970	chr17:18087967-18107970	0	+	18088023	18098322	789624	12	120,156,90,77,803,91,98,77,89,59,54,817,	0,5845,10302,11049,11665,12601,13525,13953,15833,16655,18465,19186,
#Partially deleted in new
chr17	18087971	18101500	chr17:18087971-18101500	0	+	18088023	18100422	789624	8	116,161,90,61,83,73,91,8,	0,5841,10298,11045,11661,12391,12597,13521,
#Partially deleted in new
chr17	18087973	18100605	chr17:18087973-18100605	0	+	18088023	18099656	789624	6	114,161,90,91,73,37,	0,5839,10296,11659,12389,12595,
#Partially deleted in new
chr17	18087973	18098464	chr17:18087973-18098464	0	+	18087973	18087973	8553170	3	114,156,195,	0,5839,10296,
#Partially deleted in new
chr17	18087975	18101517	chr17:18087975-18101517	0	+	18088023	18101517	789624	4	112,161,91,25,	0,5837,12593,13517,
#Partially deleted in new
chr17	18087978	18100261	chr17:18087978-18100261	0	+	18087978	18087978	8553170	5	109,161,90,77,629,	0,5834,10291,11038,11654,
#Partially deleted in new
chr17	18088006	18107600	chr17:18088006-18107600	1	+	18088023	18107212	789624	6	81,161,89,59,54,447,	0,5806,15794,16616,18426,19147,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	18095721	18107970	chr17:18095721-18107970	0	+	18095721	18095721	8553170	9	2638,1419,91,98,77,89,59,54,817,	0,3295,4847,5771,6199,8079,8901,10711,11432,
#Partially deleted in new
chr17	18104559	18107941	chr17:18104559-18107941	0	+	18104559	18104559	8553170	3	122,54,788,	0,1873,2594,
#Partially deleted in new
chr17	18105446	18107969	chr17:18105446-18107969	0	+	18105446	18105446	8553170	2	1040,816,	0,1707,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	18107333	18110463	chr17:18107333-18110463	3	-	18107333	18107333	8553170	1	3130,	0,
#Partially deleted in new
chr17	18108705	18179806	chr17:18108705-18179806	3	+	18118800	18178870	789624	66	119,3828,83,64,110,75,91,6,104,64,114,162,114,59,124,96,132,126,78,149,46,125,118,176,85,54,82,131,96,236,182,73,192,161,95,115,68,78,181,133,106,73,122,60,76,116,119,142,112,75,179,116,73,73,74,83,131,95,78,97,161,134,134,134,141,1038,	0,9876,15777,16462,17641,18085,18369,22099,22533,22762,23747,24519,27005,27711,27857,28878,29409,30105,30828,31811,32081,32313,32947,33373,34050,34860,35009,35164,35791,37166,39323,39790,40055,40510,40780,41723,41992,42130,42404,42689,43140,43406,45069,45425,45974,46404,46608,47489,48248,48450,49016,49817,50219,50569,50900,51229,52611,53879,54538,55036,57655,58884,62932,63451,65075,70063,
#Partially deleted in new
chr17	18108705	18179799	chr17:18108705-18179799	1	+	18118800	18178870	789624	65	119,3828,83,64,110,75,91,110,64,114,162,114,59,124,96,132,126,78,149,46,125,118,176,85,54,82,131,96,236,182,73,192,161,95,115,68,78,181,133,106,73,122,60,76,116,119,142,112,75,179,116,73,73,74,83,131,95,78,97,161,134,134,134,141,1031,	0,9876,15777,16462,17641,18085,18369,22527,22762,23747,24519,27005,27711,27857,28878,29409,30105,30828,31811,32081,32313,32947,33373,34050,34860,35009,35164,35791,37166,39323,39790,40055,40510,40780,41723,41992,42130,42404,42689,43140,43406,45069,45425,45974,46404,46608,47489,48248,48450,49016,49817,50219,50569,50900,51229,52611,53879,54538,55036,57655,58884,62932,63451,65075,70063,
#Partially deleted in new
chr17	18108755	18179802	chr17:18108755-18179802	1	+	18118800	18178870	789624	66	69,3828,83,64,110,75,91,6,104,64,114,162,114,59,124,96,132,126,78,149,46,125,118,176,85,54,82,131,96,236,182,73,192,161,95,115,68,78,181,133,106,73,122,60,76,116,119,142,112,75,179,116,73,73,74,83,131,95,78,97,161,134,134,134,141,1034,	0,9826,15727,16412,17591,18035,18319,22049,22483,22712,23697,24469,26955,27661,27807,28828,29359,30055,30778,31761,32031,32263,32897,33323,34000,34810,34959,35114,35741,37116,39273,39740,40005,40460,40730,41673,41942,42080,42354,42639,43090,43356,45019,45375,45924,46354,46558,47439,48198,48400,48966,49767,50169,50519,50850,51179,52561,53829,54488,54986,57605,58834,62882,63401,65025,70013,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	18119167	18125566	chr17:18119167-18125566	0	+	18119167	18119167	8553170	1	6399,	0,
#Deleted in new
chr17	18137840	18139611	chr17:18137840-18139611	0	+	18137840	18137840	8553170	4	139,132,126,78,	0,274,970,1693,
#Partially deleted in new
chr17	18139273	18142137	chr17:18139273-18142137	0	+	18139273	18139273	8553170	7	96,78,197,46,125,118,59,	0,260,1195,1513,1745,2379,2805,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	18146013	18149975	chr17:18146013-18149975	0	+	18146013	18146013	8553170	4	94,182,192,760,	0,2015,2747,3202,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr17	18153394	18179222	chr17:18153394-18179222	1	+	18154739	18178827	789624	24	502,60,76,116,119,142,112,75,179,116,73,73,74,83,131,95,78,97,161,134,134,134,141,506,	0,736,1285,1715,1919,2800,3559,3761,4327,5128,5530,5880,6211,6540,7922,9190,9849,10347,12966,14195,18243,18762,20386,25322,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr17	18153653	18178984	chr17:18153653-18178984	0	+	18153653	18153653	8553170	22	243,60,76,323,142,112,745,116,73,73,74,83,131,95,78,97,161,134,134,210,327,216,	0,477,1026,1456,2541,3300,3502,4869,5271,5621,5952,6281,7663,8931,9590,10088,12707,13936,17984,18553,19941,25115,
#Partially deleted in new
chr17	18153722	18179741	chr17:18153722-18179741	1	+	18154739	18178827	789624	23	174,60,76,116,119,142,112,75,179,116,73,73,74,83,131,95,78,97,161,134,134,84,973,	0,408,957,1387,1591,2472,3231,3433,3999,4800,5202,5552,5883,6212,7594,8862,9521,10019,12638,13867,17915,18484,25046,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	18154053	18172516	chr17:18154053-18172516	0	+	18154053	18154053	8553170	9	137,179,131,95,78,97,134,134,360,	0,3668,7263,8531,9190,9688,13536,17584,18103,
#Partially deleted in new
chr17	18154053	18157538	chr17:18154053-18157538	0	+	18154053	18154053	8553170	6	137,116,119,142,112,383,	0,1056,1260,2141,2900,3102,
#Partially deleted in new
chr17	18154077	18156269	chr17:18154077-18156269	0	+	18154077	18154077	8553170	5	113,76,116,114,75,	0,602,1032,1241,2117,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr17	18154684	18179730	chr17:18154684-18179730	0	+	18154684	18154684	8553170	21	71,116,119,142,112,745,116,73,73,83,131,95,78,97,161,134,140,134,210,141,962,	0,425,629,1510,2269,2471,3838,4240,4590,5250,6632,7900,8559,9057,11676,12905,14797,16953,17522,19096,24084,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr17	18155915	18179741	chr17:18155915-18179741	0	+	18155915	18155915	8553170	20	421,112,75,161,116,73,73,74,83,131,95,78,97,161,134,140,134,134,141,973,	0,1038,1240,1806,2607,3009,3359,3690,4019,5401,6669,7328,7826,10445,11674,13566,15722,16241,17865,22853,
#Partially deleted in new
chr17	18158307	18162665	chr17:18158307-18162665	0	+	18158979	18162665	789624	7	58,73,73,74,83,131,81,	0,617,967,1298,1627,3009,4277,
#Partially deleted in new
chr17	18158307	18163284	chr17:18158307-18163284	0	+	18158307	18158307	8553170	6	58,73,83,131,95,41,	0,967,1627,3009,4277,4936,
#Partially deleted in new
chr17	18158311	18163251	chr17:18158311-18163251	0	+	18158979	18159951	789624	7	54,73,73,83,131,95,8,	0,613,963,1623,3005,4273,4932,
#Partially deleted in new
chr17	18158337	18161437	chr17:18158337-18161437	0	+	18158979	18161437	789624	7	28,116,73,73,74,83,121,	0,185,587,937,1268,1597,2979,
#Partially deleted in new
chr17	18158345	18179802	chr17:18158345-18179802	0	+	18158345	18158345	8553170	13	20,73,743,131,95,78,97,161,134,134,210,141,1034,	0,579,929,2971,4239,4898,5396,8015,9244,13292,13861,15435,20423,
#Partially deleted in new
chr17	18159661	18178944	chr17:18159661-18178944	0	+	18159661	18178720	789624	9	18,83,131,95,78,97,134,134,228,	0,273,1655,2923,3582,4080,11976,12495,19055,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	18160746	18165110	chr17:18160746-18165110	0	+	18160746	18160746	8553170	4	701,95,78,1369,	0,1838,2497,2995,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	18161367	18178870	chr17:18161367-18178870	0	+	18161367	18167600	789624	9	80,95,78,97,134,140,134,134,154,	0,1217,1876,2374,6222,8114,10270,10789,17349,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	18172624	18184667	chr17:18172624-18184667	3	-	18172624	18172624	8553170	3	121,121,271,	0,5620,11772,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	18176564	18184753	chr17:18176564-18184753	1	-	18176564	18176564	8553170	2	1801,357,	0,7832,
#Partially deleted in new
chr17	18183077	18209398	chr17:18183077-18209398	1	+	18208234	18208396	789624	4	188,81,156,1180,	0,11877,23737,25141,
#Partially deleted in new
chr17	18184238	18209954	chr17:18184238-18209954	3	+	18184243	18208396	0	4	775,81,156,1736,	0,10716,22576,23980,
#Partially deleted in new
chr17	18206560	18209954	chr17:18206560-18209954	0	+	18206560	18206560	8553170	2	410,1736,	0,1658,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr17	18225586	18244875	chr17:18225586-18244875	3	+	18225682	18242821	789624	23	177,98,82,131,159,163,136,55,155,224,68,154,105,293,148,154,296,265,115,113,121,80,968,	0,4354,6908,7085,8191,8426,8686,9062,9252,9502,9883,11020,11248,11894,12480,12869,14991,15864,16298,16579,16921,17156,18321,
#Partially deleted in new
chr17	18225676	18242823	chr17:18225676-18242823	1	+	18225682	18242813	789624	24	87,98,82,131,159,163,136,55,155,224,68,154,105,257,16,153,154,296,265,115,113,121,67,13,	0,4264,6818,6995,8101,8336,8596,8972,9162,9412,9793,10930,11158,11804,12368,12385,12779,14901,15774,16208,16489,16831,17066,17134,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	18233901	18244875	chr17:18233901-18244875	0	+	18233901	18233901	8553170	15	35,163,136,55,155,224,1291,939,148,154,1422,113,121,80,968,	0,111,371,747,937,1187,1568,2933,4165,4554,6676,8264,8606,8841,10006,
#Partially deleted in new
chr17	18244835	18258916	chr17:18244835-18258916	3	-	18245137	18258690	789624	30	437,66,106,107,129,61,155,235,140,189,192,105,172,84,75,83,180,213,137,148,85,158,176,104,162,86,81,72,111,289,	0,518,719,908,1098,1326,1472,1758,2077,2333,2821,3093,3714,3964,4291,4490,6002,6429,6844,7163,7636,8465,8708,9243,9685,9933,10347,11690,12073,13792,
#Deleted in new
chr17	18244835	18246062	chr17:18244835-18246062	0	-	18245137	18246062	789624	4	584,106,107,129,	0,719,908,1098,
#Partially deleted in new
chr17	18244835	18258726	chr17:18244835-18258726	1	-	18245073	18258690	789624	17	410,75,83,180,213,134,148,85,158,176,104,162,86,81,72,111,99,	0,4291,4490,6002,6429,6844,7163,7636,8465,8708,9243,9685,9933,10347,11690,12073,13792,
#Deleted in new
chr17	18244835	18245968	chr17:18244835-18245968	0	-	18245624	18245968	789624	4	437,66,106,35,	0,518,719,1098,
#Partially deleted in new
chr17	18244840	18258723	chr17:18244840-18258723	1	-	18245137	18258690	789624	29	432,66,106,107,129,61,155,235,140,189,192,105,172,84,75,83,180,213,134,148,85,158,176,104,86,81,72,111,96,	0,513,714,903,1093,1321,1467,1753,2072,2328,2816,3088,3709,3959,4286,4485,5997,6424,6839,7158,7631,8460,8703,9238,9928,10342,11685,12068,13787,
#Partially deleted in new
chr17	18244921	18258705	chr17:18244921-18258705	0	-	18257033	18258690	789624	30	351,66,106,107,129,61,155,235,140,189,192,105,172,84,75,83,180,213,137,148,85,158,176,104,162,86,81,72,218,78,	0,432,633,822,1012,1240,1386,1672,1991,2247,2735,3007,3628,3878,4205,4404,5916,6343,6758,7077,7550,8379,8622,9157,9599,9847,10261,11604,11987,13706,
#Partially deleted in new
chr17	18245058	18258556	chr17:18245058-18258556	1	-	18245137	18258476	789624	30	214,66,106,107,129,61,155,235,140,189,192,105,172,84,75,83,180,213,137,148,85,158,176,104,162,86,81,72,111,110,	0,295,496,685,875,1103,1249,1535,1854,2110,2598,2870,3491,3741,4068,4267,5779,6206,6621,6940,7413,8242,8485,9020,9462,9710,10124,11467,11850,13388,
#Deleted in new
chr17	18245228	18246008	chr17:18245228-18246008	0	-	18245228	18245228	8553170	2	44,655,	0,125,
#Deleted in new
chr17	18245229	18246215	chr17:18245229-18246215	0	-	18245229	18245229	8553170	4	190,106,319,54,	0,325,514,932,
#Deleted in new
chr17	18245229	18246200	chr17:18245229-18246200	0	-	18245229	18245229	8553170	4	43,66,508,39,	0,124,325,932,
#Deleted in new
chr17	18245237	18246314	chr17:18245237-18246314	0	-	18245237	18245237	8553170	6	35,66,106,107,129,153,	0,116,317,506,696,924,
#Deleted in new
chr17	18245237	18246006	chr17:18245237-18246006	0	-	18245237	18245237	8553170	4	35,307,107,73,	0,116,506,696,
#Partially deleted in new
chr17	18245350	18254651	chr17:18245350-18254651	0	-	18245350	18254651	789624	6	69,106,107,56,86,131,	0,204,393,583,8746,9170,
#Deleted in new
chr17	18245353	18246222	chr17:18245353-18246222	0	-	18245353	18245353	8553170	4	66,106,225,61,	0,201,484,808,
#Deleted in new
chr17	18246110	18246755	chr17:18246110-18246755	0	-	18246110	18246110	8553170	2	352,162,	0,483,
#Deleted in new
chr17	18246152	18247125	chr17:18246152-18247125	0	-	18246152	18246152	8553170	4	70,155,235,213,	0,155,441,760,
#Deleted in new
chr17	18246544	18247436	chr17:18246544-18247436	0	-	18246544	18246544	8553170	3	284,140,268,	0,368,624,
#Deleted in new
chr17	18247175	18248759	chr17:18247175-18248759	0	-	18247175	18247175	8553170	4	182,192,105,210,	0,481,753,1374,
#Partially deleted in new
chr17	18249126	18251471	chr17:18249126-18251471	0	-	18249126	18249126	8553170	3	75,83,634,	0,199,1711,
#Partially deleted in new
chr17	18251386	18253698	chr17:18251386-18253698	0	-	18251386	18251386	8553170	5	91,137,148,85,398,	0,293,612,1085,1914,
#Partially deleted in new
chr17	18252055	18255221	chr17:18252055-18255221	0	-	18252055	18255221	789624	8	91,85,158,176,104,99,86,39,	0,416,1245,1488,2023,2465,2713,3127,
#Partially deleted in new
chr17	18252114	18254638	chr17:18252114-18254638	0	-	18252114	18252114	8553170	5	32,85,158,639,118,	0,357,1186,1429,2406,
#Partially deleted in new
chr17	18252492	18254630	chr17:18252492-18254630	0	-	18253439	18254630	789624	5	64,158,121,104,110,	0,808,1106,1586,2028,
#Deleted in new
chr17	18253356	18258691	chr17:18253356-18258691	0	-	18253356	18253356	8553170	8	102,104,162,86,81,72,111,64,	0,722,1164,1412,1826,3169,3552,5271,
#Deleted in new
chr17	18253426	18254597	chr17:18253426-18254597	0	-	18254165	18254597	789624	4	32,176,100,77,	0,117,652,1094,
#Deleted in new
chr17	18253886	18258697	chr17:18253886-18258697	0	-	18253886	18253886	8553170	7	296,162,86,81,72,111,70,	0,634,882,1296,2639,3022,4741,
#Deleted in new
chr17	18254603	18257276	chr17:18254603-18257276	0	-	18254603	18256989	789624	6	79,86,81,72,111,153,	0,165,579,1922,2305,2520,
#Deleted in new
chr17	18254790	18257276	chr17:18254790-18257276	0	-	18254790	18256989	789624	4	64,81,72,368,	0,392,1735,2118,
#Deleted in new
chr17	18256524	18258705	chr17:18256524-18258705	0	-	18256524	18256524	8553170	2	495,78,	0,2103,
#Deleted in new
chr17	18257033	18258690	chr17:18257033-18258690	1	-	18257033	18258690	789624	2	93,63,	0,1594,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	18260533	18266552	chr17:18260533-18266552	3	+	18262720	18264764	789624	4	204,154,163,2843,	0,2180,2552,3176,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	18260596	18266204	chr17:18260596-18266204	1	+	18262720	18264091	789624	4	141,154,163,2421,	0,2117,2489,3187,
#Deleted in new
chr17	18260596	18263546	chr17:18260596-18263546	1	+	18262720	18263459	789624	4	141,154,163,131,	0,2117,2489,2819,
#Deleted in new
chr17	18260603	18263515	chr17:18260603-18263515	1	+	18262720	18263430	789624	3	134,154,430,	0,2110,2482,
#Deleted in new
chr17	18260615	18264127	chr17:18260615-18264127	0	+	18260615	18260615	8553170	3	58,67,418,	0,2566,3094,
#Deleted in new
chr17	18260644	18263802	chr17:18260644-18263802	1	+	18262720	18263728	789624	4	93,154,163,130,	0,2069,2441,3028,
#Deleted in new
chr17	18260660	18263881	chr17:18260660-18263881	0	+	18262720	18263881	789624	4	77,154,163,169,	0,2053,2425,3052,
#Deleted in new
chr17	18260661	18263181	chr17:18260661-18263181	0	+	18260661	18260661	8553170	2	76,468,	0,2052,
#Deleted in new
chr17	18261109	18265781	chr17:18261109-18265781	1	+	18261135	18264764	789624	4	52,154,163,2072,	0,1604,1976,2600,
#Deleted in new
chr17	18268079	18268828	chr17:18268079-18268828	3	+	18268079	18268079	8553170	1	749,	0,
#Partially deleted in new
chr17	18271427	18274958	chr17:18271427-18274958	0	-	18274801	18274958	789624	3	246,93,164,	0,1816,3367,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	18272837	18274877	chr17:18272837-18274877	0	-	18274801	18274877	789624	2	499,83,	0,1957,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr17	18273920	18315007	chr17:18273920-18315007	3	-	18274801	18314778	0	19	1060,683,123,144,166,114,130,186,208,83,75,101,171,144,109,76,74,60,409,	0,3754,6615,8777,11221,11486,16636,16921,18724,20782,25638,27964,28343,28659,31191,32970,34430,34961,40678,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr17	18273966	18314993	chr17:18273966-18314993	1	-	18274801	18314778	0	19	1014,683,123,144,166,114,130,186,208,83,75,101,171,144,109,76,74,60,395,	0,3708,6569,8731,11175,11440,16590,16875,18678,20736,25592,27918,28297,28613,31145,32924,34384,34915,40632,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	18273966	18307159	chr17:18273966-18307159	0	-	18273966	18273966	8553170	13	1014,683,123,144,166,114,83,75,101,171,144,109,269,	0,3708,6569,8731,11175,11440,20736,25592,27918,28297,28613,31145,32924,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr17	18274227	18314993	chr17:18274227-18314993	0	-	18306936	18314778	789624	17	753,683,123,144,166,114,130,186,208,83,75,101,171,144,109,76,395,	0,3447,6308,8470,10914,11179,16329,16614,18417,20475,25331,27657,28036,28352,30884,32663,40371,
#Partially deleted in new
chr17	18274723	18315007	chr17:18274723-18315007	0	-	18306936	18314778	789624	18	257,683,123,144,166,114,130,186,208,83,75,101,171,144,109,76,60,409,	0,2951,5812,7974,10418,10683,15833,16118,17921,19979,24835,27161,27540,27856,30388,32167,34158,39875,
#Partially deleted in new
chr17	18274803	18314703	chr17:18274803-18314703	0	-	18274803	18314703	0	19	177,683,123,144,166,114,130,186,208,83,75,101,171,144,109,76,74,60,105,	0,2871,5732,7894,10338,10603,15753,16038,17841,19899,24755,27081,27460,27776,30308,32087,33547,34078,39795,
#Partially deleted in new
chr17	18280174	18282813	chr17:18280174-18282813	0	-	18280174	18280174	8553170	2	484,116,	0,2523,
#Partially deleted in new
chr17	18282790	18290916	chr17:18282790-18290916	0	-	18285241	18290916	789624	5	51,166,114,147,75,	0,2351,2616,7749,8051,
#Partially deleted in new
chr17	18285427	18302361	chr17:18285427-18302361	0	-	18290894	18302361	789624	7	93,130,186,83,75,101,98,	0,5129,5414,9275,14131,16457,16836,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	18290556	18303090	chr17:18290556-18303090	0	-	18290556	18290556	8553170	8	130,186,208,83,75,101,171,511,	0,285,2088,4146,9002,11328,11707,12023,
#Partially deleted in new
chr17	18302603	18314944	chr17:18302603-18314944	0	-	18306898	18314778	789624	6	120,109,76,112,60,346,	0,2508,4287,5709,6278,11995,
#Partially deleted in new
chr17	18302685	18314930	chr17:18302685-18314930	0	-	18302685	18302685	8553170	5	38,76,74,60,332,	0,4205,5665,6196,11913,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	18306549	18314774	chr17:18306549-18314774	0	-	18306549	18306549	8553170	4	417,74,60,176,	0,1801,2332,8049,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	18306587	18314960	chr17:18306587-18314960	0	-	18306587	18306587	8553170	4	379,112,60,362,	0,1725,2294,8011,
#Partially deleted in new
chr17	18308681	18314812	chr17:18308681-18314812	0	-	18308681	18308681	8553170	2	260,214,	0,5917,
#Deleted in new
chr17	18311903	18312651	chr17:18311903-18312651	7	+	18311903	18311903	16724991	1	748,	0,
#Partially deleted in new
chr17	18312759	18313533	chr17:18312759-18313533	7	+	18312759	18312759	16724991	2	76,389,	0,385,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	18315309	18328055	chr17:18315309-18328055	3	+	18315789	18323070	789624	2	2840,5439,	0,7307,
#Partially deleted in new
chr17	18327859	18363563	chr17:18327859-18363563	1	-	18328749	18347600	0	11	1060,111,117,123,117,213,82,161,146,115,192,	0,1418,2695,5306,7699,12183,12872,19636,25812,28026,35512,
#Partially deleted in new
chr17	18327872	18363487	chr17:18327872-18363487	3	-	18328749	18355981	0	12	1047,111,117,123,117,213,82,161,116,146,115,116,	0,1405,2682,5293,7686,12170,12859,19623,20452,25799,28013,35499,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	18327872	18341655	chr17:18327872-18341655	0	-	18327872	18327872	8553170	7	1047,111,117,123,117,213,924,	0,1405,2682,5293,7686,12170,12859,
#Partially deleted in new
chr17	18328469	18363495	chr17:18328469-18363495	0	-	18347511	18355981	789624	11	450,111,117,123,117,213,82,161,146,115,124,	0,808,2085,4696,7089,11573,12262,19026,25202,27416,34902,
#Partially deleted in new
chr17	18328527	18363451	chr17:18328527-18363451	1	-	18328749	18355981	0	11	392,111,117,123,213,82,161,116,146,115,80,	0,750,2027,4638,11515,12204,18968,19797,25144,27358,34844,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	18330683	18333439	chr17:18330683-18333439	0	-	18330683	18330683	8553170	1	2756,	0,
#Partially deleted in new
chr17	18340404	18363501	chr17:18340404-18363501	0	-	18340404	18340404	8553170	6	409,161,116,146,115,130,	0,7091,7920,13267,15481,22967,
#Deleted in new
chr17	18340813	18340886	chr17:18340813-18340886	3	-	18340813	18340813	5263520	1	73,	0,
#Partially deleted in new
chr17	18347513	18363346	chr17:18347513-18363346	0	-	18347513	18355981	789624	5	143,116,146,115,359,	0,811,6158,8372,15474,
#Deleted in new
chr17	18348243	18348672	chr17:18348243-18348672	1	-	18348243	18348672	789624	6	90,108,30,52,62,36,	0,94,206,238,327,393,
#Partially deleted in new
chr17	18353509	18363518	chr17:18353509-18363518	0	-	18353509	18353509	8553170	3	308,115,147,	0,2376,9862,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	18355978	18363542	chr17:18355978-18363542	0	-	18355978	18355981	8553170	3	22,139,171,	0,4435,7393,
#Partially deleted in new
chr17	18377661	18389647	chr17:18377661-18389647	3	+	18380937	18388248	789624	11	322,99,155,128,126,39,161,108,96,70,791,	0,3240,3705,3941,4851,5164,5363,5609,5830,10557,11195,
#Duplicated in new
chr17	18379854	18388984	chr17:18379854-18388984	3	-	18379854	18379854	8553170	2	3858,1097,	0,8033,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	18386403	18389377	chr17:18386403-18389377	0	+	18386403	18386403	8553170	3	61,70,521,	0,1815,2453,
#Deleted in new
chr17	18388870	18389459	chr17:18388870-18389459	7	+	18388870	18388870	16724991	1	589,	0,
#Deleted in new
chr17	18390152	18390323	chr17:18390152-18390323	7	-	18390152	18390152	16724991	1	171,	0,
#Deleted in new
chr17	18393479	18400961	chr17:18393479-18400961	7	+	18393479	18393479	16724991	12	72,83,40,81,108,110,49,121,95,66,97,153,	0,234,1604,2116,2648,3086,4444,5019,5853,6334,6863,7329,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	18411158	18414380	chr17:18411158-18414380	3	+	18411158	18411158	789624	2	1640,231,	0,2991,
#Partially deleted in new
chr17	18415727	18425095	chr17:18415727-18425095	7	+	18415727	18415727	16724991	8	134,79,684,633,115,237,149,302,	0,1842,4605,6453,7222,7585,8761,9066,
#Deleted in new
chr17	18418194	18418306	chr17:18418194-18418306	7	-	18418194	18418194	16724991	1	112,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	18419966	18422317	chr17:18419966-18422317	4	+	18419966	18419966	16724991	4	217,85,124,137,	0,366,926,2214,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	18419967	18425097	chr17:18419967-18425097	5	+	18419967	18419967	16724991	7	216,684,884,237,78,149,304,	0,365,2213,3345,3689,4521,4826,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	18420081	18421226	chr17:18420081-18421226	4	+	18420081	18420081	16724991	3	102,85,376,	0,251,769,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	18420128	18421239	chr17:18420128-18421239	4	+	18420128	18420128	16724991	3	55,113,389,	0,204,722,
#Partially deleted in new
chr17	18420818	18424886	chr17:18420818-18424886	5	+	18420818	18420818	16724991	6	198,162,115,221,50,93,	0,1362,2131,2494,3769,3975,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	18424320	18425097	chr17:18424320-18425097	5	+	18424320	18424320	16724991	2	317,304,	0,473,
#Deleted in new
chr17	18426860	18430627	chr17:18426860-18430627	5	+	18426860	18426860	16724991	6	501,73,244,162,126,68,	0,1557,1971,2822,3487,3699,
#Deleted in new
chr17	18426926	18431848	chr17:18426926-18431848	7	+	18426926	18426926	16724991	8	448,73,154,162,126,221,35,95,	0,1491,1995,2756,3421,3633,3953,4827,
#Deleted in new
chr17	18428171	18430624	chr17:18428171-18430624	4	+	18428171	18428171	16724991	5	319,154,162,126,65,	0,750,1511,2176,2388,
#Deleted in new
chr17	18430226	18431222	chr17:18430226-18431222	4	+	18430226	18430226	16724991	3	247,221,343,	0,333,653,
#Partially deleted in new
chr17	18432050	18441869	chr17:18432050-18441869	7	+	18432050	18432050	16724991	7	94,158,184,83,157,161,175,	0,7663,8283,8903,9123,9394,9644,
#Deleted in new
chr17	18439904	18442892	chr17:18439904-18442892	4	+	18439904	18439904	16724991	7	613,83,157,161,649,47,248,	0,1049,1269,1540,1790,2533,2740,
#Deleted in new
chr17	18439905	18441020	chr17:18439905-18441020	4	+	18439905	18439905	16724991	3	406,92,67,	0,520,1048,
#Deleted in new
chr17	18439907	18441299	chr17:18439907-18441299	4	+	18439907	18439907	16724991	4	225,129,83,126,	0,481,1046,1266,
#Deleted in new
chr17	18439984	18442734	chr17:18439984-18442734	5	+	18439984	18439984	16724991	8	533,83,157,161,126,221,47,90,	0,969,1189,1460,1710,2138,2453,2660,
#Deleted in new
chr17	18442122	18442895	chr17:18442122-18442895	5	+	18442122	18442122	16724991	2	221,458,	0,315,
#Deleted in new
chr17	18450243	18450765	chr17:18450243-18450765	5	+	18450243	18450243	16724991	1	522,	0,
#Partially deleted in new
chr17	18450636	18475920	chr17:18450636-18475920	7	+	18450636	18450636	16724991	2	129,233,	0,25051,
#Deleted in new
chr17	18452954	18453062	chr17:18452954-18453062	7	+	18452954	18452954	16724991	1	108,	0,
#Deleted in new
chr17	18453573	18453739	chr17:18453573-18453739	7	-	18453573	18453573	16724991	1	166,	0,
#Deleted in new
chr17	18460390	18463055	chr17:18460390-18463055	7	+	18460390	18460390	16724991	1	2665,	0,
#Partially deleted in new
chr17	18476736	18494818	chr17:18476736-18494818	1	+	18476854	18494299	789624	9	157,92,202,111,36,51,42,89,598,	0,7138,9197,10910,13996,14536,15211,15720,17484,
#Partially deleted in new
chr17	18476755	18494940	chr17:18476755-18494940	0	+	18476854	18486101	789624	10	138,92,131,111,96,36,51,42,89,720,	0,7119,9249,10891,12185,13977,14517,15192,15701,17465,
#Partially deleted in new
chr17	18476764	18492537	chr17:18476764-18492537	0	+	18476854	18492537	789624	5	129,92,202,111,81,	0,7110,9169,10882,15692,
#Partially deleted in new
chr17	18476773	18494945	chr17:18476773-18494945	3	+	18476854	18494367	789624	11	120,92,202,111,96,36,51,45,89,163,725,	0,7101,9160,10873,12167,13959,14499,15171,15683,15923,17447,
#Partially deleted in new
chr17	18476783	18494434	chr17:18476783-18494434	0	+	18476854	18486002	789624	10	110,202,111,96,36,51,45,89,163,214,	0,9150,10863,12157,13949,14489,15161,15673,15913,17437,
#Partially deleted in new
chr17	18476795	18494938	chr17:18476795-18494938	1	+	18476854	18494367	789624	10	98,92,202,111,36,51,42,89,163,718,	0,7079,9138,10851,13937,14477,15152,15661,15901,17425,
#Partially deleted in new
chr17	18476797	18494641	chr17:18476797-18494641	1	+	18476854	18494299	789624	8	96,92,202,111,51,42,89,421,	0,7077,9136,10849,14475,15150,15659,17423,
#Partially deleted in new
chr17	18476798	18486392	chr17:18476798-18486392	0	+	18476798	18476798	8553170	4	95,92,202,58,	0,7076,9135,9536,
#Partially deleted in new
chr17	18476799	18494926	chr17:18476799-18494926	0	+	18476854	18486101	789624	10	94,92,131,111,36,51,42,89,163,706,	0,7075,9205,10847,13933,14473,15148,15657,15897,17421,
#Partially deleted in new
chr17	18476799	18484335	chr17:18476799-18484335	0	+	18476799	18476799	8553170	2	94,461,	0,7075,
#Partially deleted in new
chr17	18485754	18488997	chr17:18485754-18488997	0	+	18485754	18485754	8553170	3	381,111,57,	0,1892,3186,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	18489480	18494941	chr17:18489480-18494941	0	+	18489480	18489480	8553170	6	1288,51,42,89,163,721,	0,1792,2467,2976,3216,4740,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	18489541	18494940	chr17:18489541-18494940	0	+	18489541	18489541	8553170	4	1782,42,403,720,	0,2406,2915,4679,
#Deleted in new
chr17	18492168	18492739	chr17:18492168-18492739	0	+	18492168	18492168	8553170	2	377,115,	0,456,
#Partially deleted in new
chr17	18497094	18506313	chr17:18497094-18506313	7	-	18497094	18497094	16724991	5	580,149,87,208,635,	0,3221,4341,5980,8584,
#Partially deleted in new
chr17	18497566	18503282	chr17:18497566-18503282	5	-	18497566	18497566	16724991	6	108,193,149,122,87,208,	0,1629,2749,3348,3869,5508,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	18511220	18541920	chr17:18511220-18541920	1	-	18511220	18511220	8553170	10	2238,93,425,289,193,175,92,191,45,994,	0,3368,4125,5964,8261,17352,21285,21491,22126,29706,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	18511261	18520806	chr17:18511261-18520806	7	-	18511261	18511261	16724991	5	2197,93,425,289,1325,	0,3327,4084,5923,8220,
#Partially deleted in new
chr17	18513277	18528694	chr17:18513277-18528694	0	-	18513277	18513277	8553170	8	181,93,425,289,193,67,101,122,	0,1311,2068,3907,6204,7801,10499,15295,
#Partially deleted in new
chr17	18513284	18519674	chr17:18513284-18519674	5	-	18513284	18513284	16724991	5	174,93,425,289,193,	0,1304,2061,3900,6197,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	18514071	18521252	chr17:18514071-18521252	4	-	18514071	18514071	16724991	3	1699,289,1771,	0,3113,5410,
#Partially deleted in new
chr17	18517192	18521124	chr17:18517192-18521124	4	-	18517192	18517192	16724991	3	281,193,65,	0,2289,3867,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	18517289	18529328	chr17:18517289-18529328	0	-	18517289	18517289	8553170	3	184,193,756,	0,2192,11283,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	18517318	18523295	chr17:18517318-18523295	4	-	18517318	18517318	16724991	3	155,193,231,	0,2163,5746,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	18517381	18551694	chr17:18517381-18551694	0	-	18517381	18517381	8553170	8	92,193,101,92,100,119,43,189,	0,2100,6395,15124,24706,25487,26291,34124,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	18517381	18528984	chr17:18517381-18528984	0	-	18517381	18517381	8553170	4	92,193,191,412,	0,2100,10188,11191,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	18517381	18532878	chr17:18517381-18532878	0	-	18517381	18517381	8553170	4	92,193,175,373,	0,2100,11191,15124,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	18517381	18524397	chr17:18517381-18524397	0	-	18517381	18517381	8553170	3	92,193,621,	0,2100,6395,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	18517410	18551705	chr17:18517410-18551705	0	-	18517410	18517410	8553170	8	63,193,67,175,92,100,43,200,	0,2071,3668,11162,15095,24677,26262,34095,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	18519481	18551554	chr17:18519481-18551554	0	-	18519481	18519481	8553170	7	193,101,175,92,100,43,49,	0,4295,9091,13024,22606,24191,32024,
#Partially deleted in new
chr17	18519490	18525930	chr17:18519490-18525930	5	-	18519490	18519490	16724991	2	184,69,	0,6371,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	18523805	18533034	chr17:18523805-18533034	0	-	18523805	18523805	8553170	3	72,175,529,	0,4767,8700,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	18524565	18526846	chr17:18524565-18526846	0	-	18524565	18524565	5263520	1	2281,	0,
#Deleted in new
chr17	18527556	18528461	chr17:18527556-18528461	7	+	18527556	18527556	16724991	2	157,97,	0,808,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	18528585	18551685	chr17:18528585-18551685	0	-	18528585	18528585	8553170	4	162,100,43,180,	0,13502,15087,22920,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr17	18537799	18625608	chr17:18537799-18625608	7	-	18537799	18537799	16724991	17	4388,43,210,221,294,954,129,183,214,142,34,137,840,74,249,71,505,	0,5873,13706,15353,16173,41857,44858,45541,49866,56921,57348,65804,67980,70097,72244,84699,87304,
#Partially deleted in new
chr17	18541485	18551554	chr17:18541485-18551554	4	-	18541485	18541485	16724991	4	702,107,43,49,	0,1502,2187,10020,
#Partially deleted in new
chr17	18542154	18625447	chr17:18542154-18625447	5	-	18542154	18542154	16724991	18	33,43,210,221,294,138,954,129,183,214,142,34,137,840,74,249,71,344,	0,1518,9351,10998,11818,35785,37502,40503,41186,45511,52566,52993,61449,63625,65742,67889,80344,82949,
#Deleted in new
chr17	18551027	18554265	chr17:18551027-18554265	4	-	18551027	18551027	16724991	4	84,210,221,293,	0,478,2125,2945,
#Partially deleted in new
chr17	18572751	18572961	chr17:18572751-18572961	7	+	18572751	18572751	16724991	1	210,	0,
#Partially deleted in new
chr17	18588278	18606391	chr17:18588278-18606391	4	-	18588278	18588278	16724991	5	68,142,34,137,612,	0,6442,6869,15325,17501,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	18590858	18603740	chr17:18590858-18603740	4	-	18590858	18590858	16724991	4	264,142,34,137,	0,3862,4289,12745,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	18603288	18625617	chr17:18603288-18625617	5	-	18603288	18603288	16724991	6	452,840,71,249,71,514,	0,2491,4608,6755,19210,21815,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	18605053	18605356	chr17:18605053-18605356	3	-	18605053	18605053	8553170	1	303,	0,
#Partially deleted in new
chr17	18606662	18625608	chr17:18606662-18625608	4	-	18606662	18606662	16724991	5	47,74,249,71,505,	0,1234,3381,15836,18441,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	18620085	18625541	chr17:18620085-18625541	4	-	18620085	18620085	16724991	3	180,71,438,	0,2413,5018,
#Deleted in new
chr17	18635005	18642424	chr17:18635005-18642424	1	-	18636461	18641352	789624	9	1592,110,108,81,40,83,76,102,597,	0,2858,3307,3615,4169,6016,6272,6626,6822,
#Deleted in new
chr17	18635528	18644427	chr17:18635528-18644427	3	-	18636461	18641352	789624	10	1069,110,108,81,40,83,76,102,171,138,	0,2335,2784,3092,3646,5493,5749,6103,6299,8761,
#Deleted in new
chr17	18638018	18638370	chr17:18638018-18638370	7	-	18638018	18638018	16724991	1	352,	0,
#Partially deleted in new
chr17	18638860	18661950	chr17:18638860-18661950	0	-	18638860	18638860	8553170	3	354,83,37,	0,2161,23053,
#Deleted in new
chr17	18639175	18644418	chr17:18639175-18644418	0	-	18639175	18641352	789624	7	39,83,76,102,171,47,129,	0,1846,2102,2456,2652,3410,5114,
#Deleted in new
chr17	18641021	18644427	chr17:18641021-18644427	0	-	18641021	18641352	789624	5	83,76,102,171,138,	0,256,610,806,3268,
#Deleted in new
chr17	18641305	18644427	chr17:18641305-18644427	0	-	18641305	18641352	789624	3	48,367,138,	0,326,2984,
#Deleted in new
chr17	18641311	18642838	chr17:18641311-18642838	0	-	18641311	18641352	789624	4	42,102,142,253,	0,320,516,1274,
#Deleted in new
chr17	18641664	18642829	chr17:18641664-18642829	0	-	18641664	18641664	8553170	2	334,244,	0,921,
#Deleted in new
chr17	18641668	18644366	chr17:18641668-18644366	0	-	18641668	18641668	8553170	2	301,77,	0,2621,
#Deleted in new
chr17	18641838	18644417	chr17:18641838-18644417	0	-	18641838	18641838	8553170	4	160,47,224,128,	0,747,898,2451,
#Deleted in new
chr17	18650194	18651542	chr17:18650194-18651542	7	+	18650194	18650194	16724991	1	1348,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	18658428	18682228	chr17:18658428-18682228	1	-	18663155	18681651	789624	4	4799,89,232,25,	0,22312,23186,23775,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	18658428	18682259	chr17:18658428-18682259	3	-	18661936	18681651	789624	5	4860,91,89,232,56,	0,14536,22312,23186,23775,
#Deleted in new
chr17	18667628	18669461	chr17:18667628-18669461	3	-	18667628	18667628	8553170	1	1833,	0,
#Deleted in new
chr17	18670945	18672873	chr17:18670945-18672873	7	-	18670945	18670945	16724991	1	1928,	0,
#Partially deleted in new
chr17	18672792	18682259	chr17:18672792-18682259	0	-	18672792	18681651	789624	4	263,89,232,56,	0,7948,8822,9411,
#Partially deleted in new
chr17	18672863	18681858	chr17:18672863-18681858	0	-	18672863	18681651	789624	3	192,89,244,	0,7877,8751,
#Deleted in new
chr17	18677260	18677757	chr17:18677260-18677757	7	+	18677260	18677260	16724991	1	497,	0,
#Deleted in new
chr17	18680750	18681818	chr17:18680750-18681818	0	-	18680750	18681651	789624	2	79,425,	0,643,
#Deleted in new
chr17	18681320	18682241	chr17:18681320-18682241	0	-	18681320	18681320	8553170	2	526,38,	0,883,
#Deleted in new
chr17	18681441	18682262	chr17:18681441-18682262	0	-	18681441	18681441	8553170	2	492,59,	0,762,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	18697997	18735667	chr17:18697997-18735667	0	+	18697997	18697997	8553170	9	117,122,98,89,96,234,166,96,791,	0,1156,1362,3359,24239,29527,33072,34041,36879,
#Partially deleted in new
chr17	18698007	18722245	chr17:18698007-18722245	0	+	18698007	18698007	8553170	6	107,122,89,147,102,9,	0,1146,3349,6611,7055,24229,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	18698009	18736118	chr17:18698009-18736118	0	+	18698009	18698009	8553170	7	1266,89,96,234,166,96,1242,	0,3347,24227,29515,33060,34029,36867,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	18698027	18704547	chr17:18698027-18704547	0	+	18698027	18698027	8553170	5	87,122,98,89,419,	0,1126,1332,3329,6101,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	18699214	18735490	chr17:18699214-18735490	0	+	18699214	18699214	8553170	10	61,98,89,147,102,96,234,166,96,614,	0,145,2142,5404,5848,23022,28310,31855,32824,35662,
#Partially deleted in new
chr17	18701356	18704765	chr17:18701356-18704765	0	+	18701356	18701356	8553170	2	89,108,	0,3301,
#Deleted in new
chr17	18704639	18704769	chr17:18704639-18704769	7	+	18704639	18704639	16724991	1	130,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	18721776	18731213	chr17:18721776-18731213	0	+	18721776	18721776	8553170	4	86,96,234,144,	0,460,5748,9293,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	18722022	18736118	chr17:18722022-18736118	0	+	18722022	18722022	8553170	5	310,234,166,96,1242,	0,5502,9047,10016,12854,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	18722088	18736118	chr17:18722088-18736118	3	+	18727557	18735460	789624	5	244,234,166,96,1242,	0,5436,8981,9950,12788,
#Partially deleted in new
chr17	18722117	18735087	chr17:18722117-18735087	0	+	18722117	18722117	8553170	6	215,62,234,166,96,211,	0,1652,5407,8952,9921,12759,
#Partially deleted in new
chr17	18722118	18735427	chr17:18722118-18735427	0	+	18722118	18722118	8553170	3	214,234,551,	0,5406,12758,
#Partially deleted in new
chr17	18722120	18734922	chr17:18722120-18734922	0	+	18722120	18722120	8553170	4	212,234,96,46,	0,5404,9918,12756,
#Partially deleted in new
chr17	18722122	18731219	chr17:18722122-18731219	0	+	18722122	18722122	8553170	4	210,62,137,150,	0,1647,5499,8947,
#Partially deleted in new
chr17	18722236	18735460	chr17:18722236-18735460	4	+	18722236	18722236	16724991	5	96,234,166,96,584,	0,5288,8833,9802,12640,
#Partially deleted in new
chr17	18722246	18732134	chr17:18722246-18732134	0	+	18722246	18722246	8553170	4	86,178,166,96,	0,5278,8823,9792,
#Partially deleted in new
chr17	18727650	18736112	chr17:18727650-18736112	0	+	18727650	18727650	8553170	5	108,166,96,325,96,	0,3419,4388,7226,8366,
#Partially deleted in new
chr17	18744023	18779349	chr17:18744023-18779349	3	+	18744244	18779298	789624	14	726,165,201,128,123,110,201,122,149,143,159,272,57,875,	0,3917,5698,5986,6907,12021,14281,20718,22690,24510,25903,28388,31112,34451,
#Partially deleted in new
chr17	18744025	18779349	chr17:18744025-18779349	1	+	18744244	18779298	789624	12	724,165,416,123,110,201,122,149,143,159,272,872,	0,3915,5696,6905,12019,14279,20716,22688,24508,25901,28386,34452,
#Partially deleted in new
chr17	18744071	18779342	chr17:18744071-18779342	0	+	18744244	18744835	789624	14	1324,165,201,128,123,110,201,122,149,143,159,272,57,264,	0,3869,5650,5938,6859,11973,14233,20670,22642,24462,25855,28340,31064,35007,
#Partially deleted in new
chr17	18744074	18779349	chr17:18744074-18779349	1	+	18744244	18779298	789624	13	675,165,201,128,123,110,201,122,149,143,272,57,875,	0,3866,5647,5935,6856,11970,14230,20667,22639,24459,28337,31061,34400,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	18769476	18772634	chr17:18769476-18772634	0	+	18769476	18769476	8553170	3	226,122,223,	0,450,2935,
#Partially deleted in new
chr17	18780994	18806714	chr17:18780994-18806714	3	+	18781293	18805567	789624	7	311,83,145,90,132,129,1174,	0,8358,9901,16584,17817,23143,24546,
#Partially deleted in new
chr17	18781110	18805895	chr17:18781110-18805895	0	+	18781293	18797580	789624	7	195,83,65,90,132,129,355,	0,8242,9785,16468,17701,23027,24430,
#Partially deleted in new
chr17	18781142	18805661	chr17:18781142-18805661	0	+	18781293	18797597	789624	6	163,83,90,132,129,121,	0,8210,16436,17669,22995,24398,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	18781154	18804616	chr17:18781154-18804616	1	+	18781293	18804287	789624	6	151,83,145,90,132,479,	0,8198,9741,16424,17657,22983,
#Partially deleted in new
chr17	18781179	18804263	chr17:18781179-18804263	0	+	18790992	18804263	789624	6	126,78,145,90,132,126,	0,8178,9716,16399,17632,22958,
#Partially deleted in new
chr17	18781286	18789669	chr17:18781286-18789669	0	+	18781286	18781286	8553170	2	19,317,	0,8066,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	18781313	18806714	chr17:18781313-18806714	1	+	18790992	18805567	789624	7	1236,83,145,90,132,129,1174,	0,8039,9582,16265,17498,22824,24227,
#Partially deleted in new
chr17	18789034	18806202	chr17:18789034-18806202	1	+	18790992	18805567	789624	7	17,83,145,90,132,129,662,	0,318,1861,8544,9777,15103,16506,
#Partially deleted in new
chr17	18789362	18799131	chr17:18789362-18799131	0	+	18789362	18789362	8553170	3	73,90,320,	0,8216,9449,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	18795805	18806714	chr17:18795805-18806714	0	+	18795805	18795805	8553170	4	1863,132,129,1174,	0,3006,8332,9735,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	18809955	18810940	chr17:18809955-18810940	3	+	18809955	18809955	8553170	1	985,	0,
#Partially deleted in new
chr17	18835706	18842364	chr17:18835706-18842364	7	+	18835706	18835706	16724991	4	249,74,840,137,	0,2325,3648,6521,
#Partially deleted in new
chr17	18840084	18882576	chr17:18840084-18882576	0	+	18865833	18882576	789624	7	110,137,151,53,67,173,9,	0,2143,25717,27197,32498,37613,42483,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	18840617	18840920	chr17:18840617-18840920	3	+	18840617	18840617	8553170	1	303,	0,
#Partially deleted in new
chr17	18856298	18923984	chr17:18856298-18923984	0	+	18865833	18923984	789624	9	178,151,53,67,173,116,56,149,71,	0,9503,10983,16284,21399,26269,33523,54804,67615,
#Partially deleted in new
chr17	18856298	18877788	chr17:18856298-18877788	0	+	18856298	18856298	8553170	5	131,96,151,67,91,	0,9170,9503,16284,21399,
#Partially deleted in new
chr17	18856298	18931287	chr17:18856298-18931287	1	+	18877716	18930698	0	11	131,96,151,67,173,116,56,149,71,147,748,	0,9170,9503,16284,21399,26269,33523,54804,67615,72512,74241,
#Partially deleted in new
chr17	18856328	18889877	chr17:18856328-18889877	0	+	18865833	18889877	789624	8	75,96,151,53,67,173,116,56,	0,9140,9473,10953,16254,21369,26239,33493,
#Partially deleted in new
chr17	18856340	18877738	chr17:18856340-18877738	0	+	18865833	18877738	789624	7	89,70,96,151,53,67,41,	0,1443,9128,9461,10941,16242,21357,
#Partially deleted in new
chr17	18856341	18882683	chr17:18856341-18882683	0	+	18865833	18882683	789624	8	135,136,96,151,53,67,173,116,	0,2998,9127,9460,10940,16241,21356,26226,
#Partially deleted in new
chr17	18856349	18931268	chr17:18856349-18931268	0	+	18865833	18877748	789624	11	80,96,151,67,173,116,56,149,71,147,729,	0,9119,9452,16233,21348,26218,33472,54753,67564,72461,74190,
#Partially deleted in new
chr17	18856352	18930994	chr17:18856352-18930994	1	+	18865833	18930698	0	10	77,96,151,173,116,56,149,71,147,455,	0,9116,9449,21345,26215,33469,54750,67561,72458,74187,
#Partially deleted in new
chr17	18856367	18877827	chr17:18856367-18877827	0	+	18865833	18867281	789624	6	62,96,151,78,67,130,	0,9101,9434,10889,16215,21330,
#Partially deleted in new
chr17	18856380	18911251	chr17:18856380-18911251	0	+	18865833	18877748	789624	9	49,70,96,151,67,173,116,56,149,	0,1403,9088,9421,16202,21317,26187,33441,54722,
#Partially deleted in new
chr17	18858067	18931287	chr17:18858067-18931287	3	+	18877716	18930698	0	10	194,151,67,173,116,56,149,71,147,748,	0,7734,14515,19630,24500,31754,53035,65846,70743,72472,
#Partially deleted in new
chr17	18858095	18872628	chr17:18858095-18872628	0	+	18865833	18867281	789624	5	166,96,151,78,46,	0,7373,7706,9161,14487,
#Partially deleted in new
chr17	18858103	18882683	chr17:18858103-18882683	0	+	18865833	18882683	789624	8	158,136,96,151,53,67,173,116,	0,1236,7365,7698,9178,14479,19594,24464,
#Partially deleted in new
chr17	18858106	18931215	chr17:18858106-18931215	1	+	18865833	18930698	0	12	155,96,151,53,67,173,116,56,149,71,147,676,	0,7362,7695,9175,14476,19591,24461,31715,52996,65807,70704,72433,
#Partially deleted in new
chr17	18858129	18923984	chr17:18858129-18923984	0	+	18865833	18923984	789624	9	132,151,53,67,173,116,56,149,71,	0,7672,9152,14453,19568,24438,31692,52973,65784,
#Partially deleted in new
chr17	18858136	18931024	chr17:18858136-18931024	0	+	18865833	18877748	789624	10	125,151,67,173,116,56,149,71,147,485,	0,7665,14446,19561,24431,31685,52966,65777,70674,72403,
#Partially deleted in new
chr17	18858148	18877845	chr17:18858148-18877845	0	+	18858148	18858148	8553170	5	113,96,151,67,148,	0,7320,7653,14434,19549,
#Partially deleted in new
chr17	18858162	18865900	chr17:18858162-18865900	0	+	18865833	18865900	789624	5	99,136,126,96,99,	0,1177,2403,7306,7639,
#Partially deleted in new
chr17	18858185	18924000	chr17:18858185-18924000	0	+	18865833	18911120	789624	9	76,96,151,53,67,173,56,149,87,	0,7283,7616,9096,14397,19512,31636,52917,65728,
#Partially deleted in new
chr17	18858441	18877770	chr17:18858441-18877770	0	+	18865833	18877770	789624	6	121,96,151,53,67,73,	0,7027,7360,8840,14141,19256,
#Partially deleted in new
chr17	18860514	18911251	chr17:18860514-18911251	0	+	18865833	18911251	789624	9	177,96,151,53,67,173,116,56,149,	0,4954,5287,6767,12068,17183,22053,29307,50588,
#Partially deleted in new
chr17	18865548	18930734	chr17:18865548-18930734	1	+	18865833	18930698	0	10	16,151,53,67,173,116,56,149,71,195,	0,253,1733,7034,12149,17019,24273,45554,58365,64991,
#Partially deleted in new
chr17	18865548	18867281	chr17:18865548-18867281	1	+	18865833	18867281	789624	3	16,151,25,	0,253,1708,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	18882588	18930935	chr17:18882588-18930935	0	+	18882588	18930698	789624	7	95,56,149,105,71,147,396,	0,7233,28514,34843,41325,46222,47951,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	18882679	18905046	chr17:18882679-18905046	0	+	18882679	18882679	8553170	3	4,56,767,	0,7142,21600,
#Deleted in new
chr17	18908278	18908865	chr17:18908278-18908865	7	+	18908278	18908278	16724991	1	587,	0,
#Partially deleted in new
chr17	18928267	18931268	chr17:18928267-18931268	0	+	18928267	18928267	8553170	2	690,729,	0,2272,
#Partially deleted in new
chr17	18943998	18944073	chr17:18943998-18944073	3	+	18943998	18943998	8553170	1	75,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	18950344	19022595	chr17:18950344-19022595	1	+	18958738	19020431	789624	15	514,72,105,60,105,106,206,136,156,151,111,169,216,58,2271,	0,8337,8790,9259,10203,18707,20668,26509,63017,64704,66939,69078,69368,69810,69980,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	18951624	18954149	chr17:18951624-18954149	3	-	18951624	18951624	8553170	2	899,590,	0,1935,
#Partially deleted in new
chr17	18952164	19020691	chr17:18952164-19020691	3	+	18952205	19020431	789624	15	152,72,105,60,105,106,81,206,136,156,151,169,216,58,367,	0,6517,6970,7439,8383,16887,17177,18848,24689,61197,62884,67258,67548,67990,68160,
#Partially deleted in new
chr17	18952164	19020691	chr17:18952164-19020691	1	+	18952205	19020431	789624	14	152,72,105,60,105,106,81,206,136,151,169,216,58,367,	0,6517,6970,7439,8383,16887,17177,18848,24689,62884,67258,67548,67990,68160,
#Partially deleted in new
chr17	18952187	19020685	chr17:18952187-19020685	1	+	18952205	19020431	789624	14	129,72,105,60,105,106,206,136,108,151,169,216,58,361,	0,6494,6947,7416,8360,16864,18825,24666,61222,62861,67235,67525,67967,68137,
#Partially deleted in new
chr17	18952187	19020691	chr17:18952187-19020691	1	+	18952205	19020431	789624	15	129,72,105,60,105,106,81,206,136,108,151,169,216,58,367,	0,6494,6947,7416,8360,16864,17154,18825,24666,61222,62861,67235,67525,67967,68137,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	18968788	19004804	chr17:18968788-19004804	3	-	18971358	19004041	789624	6	2960,1267,125,168,650,96,	0,8795,10760,19458,34731,35920,
#Partially deleted in new
chr17	18971067	19004238	chr17:18971067-19004238	1	-	18971358	19004041	789624	6	681,1267,125,168,650,38,	0,6516,8481,17179,32452,33133,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	18975709	19003780	chr17:18975709-19003780	0	-	18975709	18975709	8553170	3	3964,168,261,	0,12537,27810,
#Deleted in new
chr17	18976930	18977888	chr17:18976930-18977888	0	-	18976930	18977888	789624	2	121,305,	0,653,
#Deleted in new
chr17	18986147	18986334	chr17:18986147-18986334	7	-	18986147	18986147	16724991	1	187,	0,
#Deleted in new
chr17	19017640	19019729	chr17:19017640-19019729	0	+	19017640	19017640	8553170	2	1951,17,	0,2072,
#Partially deleted in new
chr17	19020672	19047637	chr17:19020672-19047637	3	-	19021958	19046926	789624	5	1472,169,123,98,789,	0,3542,15285,21134,26176,
#Partially deleted in new
chr17	19021668	19046997	chr17:19021668-19046997	1	-	19021825	19046926	789624	4	476,123,98,149,	0,14289,20138,25180,
#Partially deleted in new
chr17	19021862	19042485	chr17:19021862-19042485	1	-	19021958	19041895	789624	5	282,169,123,98,162,	0,2352,14095,19944,20461,
#Partially deleted in new
chr17	19021938	19046960	chr17:19021938-19046960	0	-	19030430	19046926	789624	6	206,169,68,123,98,112,	0,2276,8437,14019,19868,24910,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19030856	19033529	chr17:19030856-19033529	3	+	19030856	19030856	8553170	1	2673,	0,
#Partially deleted in new
chr17	19035731	19047011	chr17:19035731-19047011	0	-	19035731	19035731	8553170	3	349,98,163,	0,6075,11117,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19061911	19062669	chr17:19061911-19062669	3	+	19061911	19061911	8553170	1	758,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19061911	19062129	chr17:19061911-19062129	0	+	19061911	19061911	8553170	1	218,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19063345	19064136	chr17:19063345-19064136	3	-	19063345	19063345	8553170	1	791,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19063918	19064136	chr17:19063918-19064136	0	-	19063918	19063918	8553170	1	218,	0,
#Partially deleted in new
chr17	19077774	19087878	chr17:19077774-19087878	3	+	19077774	19077774	8553170	3	139,133,168,	0,2213,9936,
#Partially deleted in new
chr17	19077782	19087878	chr17:19077782-19087878	1	+	19077782	19077782	8553170	3	131,133,164,	0,2205,9932,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	19079987	19080629	chr17:19079987-19080629	1	+	19079987	19079987	8553170	2	133,259,	0,383,
#Duplicated in new
chr17	19082436	19084834	chr17:19082436-19084834	7	+	19082436	19082436	16724991	4	109,306,157,757,	0,419,991,1641,
#Deleted in new
chr17	19091068	19091825	chr17:19091068-19091825	3	-	19091068	19091068	8553170	1	757,	0,
#Deleted in new
chr17	19092973	19094307	chr17:19092973-19094307	1	+	19092973	19092973	8553170	2	333,843,	0,491,
#Partially deleted in new
chr17	19093191	19096361	chr17:19093191-19096361	3	+	19093191	19093191	8553170	3	115,162,279,	0,273,2891,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19094916	19096837	chr17:19094916-19096837	0	+	19094916	19094916	8553170	1	1921,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19111999	19112636	chr17:19111999-19112636	3	-	19111999	19111999	8553170	1	637,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19112418	19112636	chr17:19112418-19112636	3	-	19112418	19112418	8553170	1	218,	0,
#Partially deleted in new
chr17	19127468	19159176	chr17:19127468-19159176	3	+	19127619	19158376	789624	4	229,98,123,858,	0,5173,10997,30850,
#Partially deleted in new
chr17	19127534	19139070	chr17:19127534-19139070	1	+	19127619	19138592	789624	3	163,98,605,	0,5107,10931,
#Partially deleted in new
chr17	19132052	19138588	chr17:19132052-19138588	0	+	19132650	19138588	789624	3	170,98,123,	0,589,6413,
#Partially deleted in new
chr17	19132718	19159000	chr17:19132718-19159000	0	+	19132718	19158376	789624	3	21,123,676,	0,5747,25606,
#Partially deleted in new
chr17	19138548	19158783	chr17:19138548-19158783	0	+	19138548	19144115	789624	3	40,68,465,	0,5554,19770,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19141016	19143689	chr17:19141016-19143689	3	-	19141016	19141016	8553170	1	2673,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	19150278	19151286	chr17:19150278-19151286	3	+	19150278	19150278	8553170	2	119,72,	0,936,
#Partially deleted in new
chr17	19155726	19158893	chr17:19155726-19158893	3	-	19155726	19155726	8553170	3	279,159,115,	0,2735,3052,
#Deleted in new
chr17	19157780	19159111	chr17:19157780-19159111	1	-	19157780	19157780	8553170	2	840,333,	0,998,
#Deleted in new
chr17	19160788	19162274	chr17:19160788-19162274	3	+	19160788	19160788	8553170	1	1486,	0,
#Partially deleted in new
chr17	19164208	19174428	chr17:19164208-19174428	0	-	19164208	19164208	8553170	3	164,133,131,	0,7750,10089,
#Partially deleted in new
chr17	19164208	19174436	chr17:19164208-19174436	3	-	19164208	19164208	8553170	3	168,133,139,	0,7750,10089,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	19166895	19169668	chr17:19166895-19169668	7	-	19166895	19166895	16724991	5	37,762,174,308,125,	0,354,1604,2022,2648,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19188015	19188714	chr17:19188015-19188714	3	+	19188015	19188015	8553170	1	699,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19188015	19188233	chr17:19188015-19188233	0	+	19188015	19188015	8553170	1	218,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19189664	19190245	chr17:19189664-19190245	3	-	19189664	19189664	8553170	1	581,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19190027	19190245	chr17:19190027-19190245	0	-	19190027	19190027	8553170	1	218,	0,
#Partially deleted in new
chr17	19203824	19214045	chr17:19203824-19214045	3	+	19203824	19203824	8553170	3	139,133,168,	0,2345,10053,
#Partially deleted in new
chr17	19203832	19214045	chr17:19203832-19214045	1	+	19203832	19203832	8553170	3	131,133,164,	0,2337,10049,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	19206169	19206811	chr17:19206169-19206811	1	+	19206169	19206169	8553170	2	133,259,	0,383,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	19208583	19211359	chr17:19208583-19211359	7	+	19208583	19208583	16724991	5	121,306,180,697,37,	0,444,993,1660,2739,
#Partially deleted in new
chr17	19215614	19283217	chr17:19215614-19283217	0	+	19283119	19283217	789624	3	195,99,268,	0,66364,67335,
#Deleted in new
chr17	19219142	19220473	chr17:19219142-19220473	1	+	19219142	19219142	8553170	2	333,840,	0,491,
#Partially deleted in new
chr17	19219377	19222527	chr17:19219377-19222527	3	+	19219377	19219377	8553170	3	98,159,279,	0,256,2871,
#Partially deleted in new
chr17	19221447	19283238	chr17:19221447-19283238	0	+	19221447	19221447	8553170	4	55,126,123,289,	0,801,60507,61502,
#Partially deleted in new
chr17	19237075	19283346	chr17:19237075-19283346	0	+	19283119	19283346	789624	3	50,99,397,	0,44903,45874,
#Partially deleted in new
chr17	19237087	19274388	chr17:19237087-19274388	0	+	19237087	19237087	8553170	4	38,190,142,338,	0,34461,36046,36963,
#Partially deleted in new
chr17	19237340	19336715	chr17:19237340-19336715	3	+	19283119	19334254	789624	11	191,123,765,171,113,93,175,177,87,216,2760,	0,44614,45609,48279,72544,74711,75764,91370,92220,94512,96615,
#Partially deleted in new
chr17	19237376	19336715	chr17:19237376-19336715	1	+	19283119	19334254	789624	10	155,123,765,113,93,175,177,87,216,2760,	0,44578,45573,72508,74675,75728,91334,92184,94476,96579,
#Partially deleted in new
chr17	19237395	19335174	chr17:19237395-19335174	1	+	19309973	19334254	789624	8	136,113,93,175,177,87,216,1219,	0,72489,74656,75709,91315,92165,94457,96560,
#Partially deleted in new
chr17	19237395	19283404	chr17:19237395-19283404	0	+	19283119	19283404	789624	2	136,455,	0,45554,
#Partially deleted in new
chr17	19237395	19328762	chr17:19237395-19328762	0	+	19312073	19313144	789624	5	136,113,93,175,52,	0,72489,74656,75709,91315,
#Partially deleted in new
chr17	19237395	19274318	chr17:19237395-19274318	0	+	19237395	19237395	8553170	2	136,268,	0,36655,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	19237395	19283185	chr17:19237395-19283185	0	+	19283119	19283185	789624	4	136,142,123,236,	0,39001,44559,45554,
#Partially deleted in new
chr17	19237396	19329636	chr17:19237396-19329636	0	+	19283119	19329636	789624	8	135,123,765,113,93,175,177,76,	0,44558,45553,72488,74655,75708,91314,92164,
#Partially deleted in new
chr17	19237415	19332068	chr17:19237415-19332068	0	+	19309973	19332068	789624	7	116,113,93,157,177,87,216,	0,72469,74636,75707,91295,92145,94437,
#Partially deleted in new
chr17	19237415	19334490	chr17:19237415-19334490	1	+	19309973	19334254	789624	8	116,113,93,154,177,87,216,535,	0,72469,74636,75710,91295,92145,94437,96540,
#Partially deleted in new
chr17	19237415	19283091	chr17:19237415-19283091	0	+	19237415	19237415	8553170	4	116,156,123,142,	0,11955,44539,45534,
#Partially deleted in new
chr17	19237496	19283100	chr17:19237496-19283100	0	+	19237496	19237496	8553170	3	35,123,151,	0,44458,45453,
#Partially deleted in new
chr17	19248393	19283180	chr17:19248393-19283180	0	+	19283119	19283180	789624	4	68,156,123,231,	0,977,33561,34556,
#Partially deleted in new
chr17	19257919	19283306	chr17:19257919-19283306	0	+	19283119	19283306	789624	3	83,123,357,	0,24035,25030,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	19281954	19335194	chr17:19281954-19335194	1	+	19283119	19334254	789624	8	1760,113,93,175,177,87,216,1239,	0,27930,30097,31150,46756,47606,49898,52001,
#Partially deleted in new
chr17	19281954	19313734	chr17:19281954-19313734	0	+	19281954	19281954	8553170	5	123,765,113,93,630,	0,995,27930,30097,31150,
#Partially deleted in new
chr17	19282978	19336715	chr17:19282978-19336715	1	+	19283119	19335448	789624	8	736,171,113,93,175,177,87,1311,	0,2641,26906,29073,30126,45732,46582,52426,
#Partially deleted in new
chr17	19283046	19334330	chr17:19283046-19334330	1	+	19283119	19334254	789624	8	668,113,93,154,177,87,216,375,	0,26838,29005,30079,45664,46514,48806,50909,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	19296595	19306261	chr17:19296595-19306261	3	-	19296595	19296595	789624	3	743,124,323,	0,7219,9343,
#Partially deleted in new
chr17	19309973	19330676	chr17:19309973-19330676	0	+	19309973	19309973	8553170	6	24,93,154,177,87,63,	0,2078,3152,18737,19587,20640,
#Partially deleted in new
chr17	19312911	19331973	chr17:19312911-19331973	0	+	19312911	19312911	8553170	4	109,177,87,121,	0,15799,16649,18941,
#Deleted in new
chr17	19329081	19329616	chr17:19329081-19329616	0	+	19329081	19329081	8553170	1	535,	0,
#Deleted in new
chr17	19334307	19336127	chr17:19334307-19336127	3	-	19334307	19334307	8553170	2	156,1504,	0,316,
#Partially deleted in new
chr17	19337553	19378182	chr17:19337553-19378182	1	-	19337703	19360378	789624	7	195,68,63,97,112,69,324,	0,6236,9715,10230,20286,22766,40305,
#Partially deleted in new
chr17	19340914	19362597	chr17:19340914-19362597	0	-	19347286	19362569	789624	7	412,68,63,89,112,69,91,	0,2875,6354,6869,16925,19405,21592,
#Partially deleted in new
chr17	19340920	19362614	chr17:19340920-19362614	1	-	19341237	19362569	789624	7	406,68,63,97,112,69,108,	0,2869,6348,6863,16919,19399,21586,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	19343056	19362710	chr17:19343056-19362710	1	-	19343709	19362569	789624	6	801,63,97,112,69,204,	0,4212,4727,14783,17263,19450,
#Partially deleted in new
chr17	19343169	19362713	chr17:19343169-19362713	3	-	19343318	19362569	789624	7	292,68,63,97,112,69,207,	0,620,4099,4614,14670,17150,19337,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	19343169	19378182	chr17:19343169-19378182	1	-	19343546	19360378	789624	6	688,63,97,112,69,324,	0,4099,4614,14670,17150,34689,
#Partially deleted in new
chr17	19343174	19357876	chr17:19343174-19357876	0	-	19343481	19357876	789624	5	321,68,63,97,37,	0,615,4094,4609,14665,
#Partially deleted in new
chr17	19343178	19377910	chr17:19343178-19377910	1	-	19343458	19360378	789624	7	283,68,63,97,112,69,52,	0,611,4090,4605,14661,17141,34680,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	19343453	19362733	chr17:19343453-19362733	1	-	19343458	19362569	789624	7	97,68,63,97,112,69,227,	0,336,3815,4330,14386,16866,19053,
#Partially deleted in new
chr17	19343481	19362569	chr17:19343481-19362569	1	-	19343481	19362569	789624	7	14,68,63,97,112,69,63,	0,308,3787,4302,14358,16838,19025,
#Partially deleted in new
chr17	19343727	19362721	chr17:19343727-19362721	0	-	19343727	19360378	789624	6	130,63,97,112,69,122,	0,3541,4056,14112,16592,18872,
#Deleted in new
chr17	19344505	19344574	chr17:19344505-19344574	3	-	19344505	19344505	5263520	1	69,	0,
#Partially deleted in new
chr17	19346945	19362669	chr17:19346945-19362669	1	-	19347138	19362569	789624	6	251,63,97,112,69,163,	0,323,838,10894,13374,15561,
#Partially deleted in new
chr17	19346949	19362542	chr17:19346949-19362542	0	-	19347148	19362542	789624	6	224,63,97,112,69,36,	0,319,834,10890,13370,15557,
#Partially deleted in new
chr17	19347198	19362713	chr17:19347198-19362713	1	-	19347264	19362569	789624	5	133,97,112,69,207,	0,585,10641,13121,15308,
#Partially deleted in new
chr17	19347279	19363031	chr17:19347279-19363031	0	-	19347279	19360378	789624	5	52,97,112,69,166,	0,504,10560,13040,15586,
#Partially deleted in new
chr17	19347290	19362619	chr17:19347290-19362619	0	-	19357589	19362619	789624	6	41,97,63,112,69,113,	0,493,10281,10549,13029,15216,
#Partially deleted in new
chr17	19360320	19377890	chr17:19360320-19377890	0	-	19360320	19360378	789624	4	68,85,110,32,	0,11228,11794,17538,
#Partially deleted in new
chr17	19363656	19377897	chr17:19363656-19377897	0	-	19363656	19363656	8553170	4	117,166,85,39,	0,779,7892,14202,
#Partially deleted in new
chr17	19371235	19378148	chr17:19371235-19378148	0	-	19371235	19371235	8553170	3	398,110,290,	0,879,6623,
#Partially deleted in new
chr17	19371559	19378193	chr17:19371559-19378193	0	-	19371559	19371559	8553170	3	74,125,335,	0,555,6299,
#Partially deleted in new
chr17	19377720	19383543	chr17:19377720-19383543	3	+	19378900	19383231	0	7	381,237,166,1079,686,134,466,	0,1175,2061,2887,4060,5092,5357,
#Partially deleted in new
chr17	19377752	19383544	chr17:19377752-19383544	1	+	19380626	19383231	0	5	349,1079,686,134,467,	0,2855,4028,5060,5325,
#Partially deleted in new
chr17	19377798	19383339	chr17:19377798-19383339	0	+	19377798	19377798	8553170	3	303,134,262,	0,5014,5279,
#Partially deleted in new
chr17	19377991	19382088	chr17:19377991-19382088	0	+	19377991	19377991	8553170	2	110,308,	0,3789,
#Partially deleted in new
chr17	19378252	19383544	chr17:19378252-19383544	1	+	19378900	19383231	0	7	290,237,166,1079,686,134,467,	0,643,1529,2355,3528,4560,4825,
#Partially deleted in new
chr17	19378259	19380680	chr17:19378259-19380680	0	+	19378900	19380680	789624	4	139,237,166,73,	0,636,1522,2348,
#Partially deleted in new
chr17	19378281	19380933	chr17:19378281-19380933	0	+	19378900	19380933	789624	4	121,237,166,326,	0,614,1500,2326,
#Partially deleted in new
chr17	19378322	19383544	chr17:19378322-19383544	1	+	19378900	19383231	0	7	308,237,166,1079,686,134,467,	0,573,1459,2285,3458,4490,4755,
#Partially deleted in new
chr17	19378467	19380472	chr17:19378467-19380472	0	+	19378467	19378467	8553170	4	75,237,166,78,	0,428,1314,1927,
#Partially deleted in new
chr17	19378503	19380166	chr17:19378503-19380166	0	+	19378503	19378503	8553170	3	39,237,385,	0,392,1278,
#Partially deleted in new
chr17	19378508	19381213	chr17:19378508-19381213	0	+	19380626	19381213	789624	2	34,606,	0,2099,
#Partially deleted in new
chr17	19378526	19380860	chr17:19378526-19380860	0	+	19378900	19379603	789624	5	104,237,13,166,253,	0,369,1066,1255,2081,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	19378528	19383538	chr17:19378528-19383538	0	+	19378528	19378528	8553170	3	3938,134,461,	0,4284,4549,
#Partially deleted in new
chr17	19378554	19380083	chr17:19378554-19380083	0	+	19378554	19378554	8553170	3	76,237,302,	0,341,1227,
#Partially deleted in new
chr17	19378748	19379961	chr17:19378748-19379961	0	+	19378748	19378748	8553170	2	384,180,	0,1033,
#Partially deleted in new
chr17	19378750	19380623	chr17:19378750-19380623	0	+	19378900	19380623	789624	4	382,166,18,16,	0,1031,1733,1857,
#Partially deleted in new
chr17	19378891	19383544	chr17:19378891-19383544	0	+	19378891	19378891	8553170	5	241,166,1859,134,467,	0,890,1716,3921,4186,
#Deleted in new
chr17	19380231	19381113	chr17:19380231-19381113	0	+	19380231	19380231	8553170	2	270,506,	0,376,
#Partially deleted in new
chr17	19383441	19387240	chr17:19383441-19387240	3	-	19384461	19387155	789624	6	1268,183,97,155,79,91,	0,1657,1916,2868,3318,3708,
#Partially deleted in new
chr17	19383441	19387190	chr17:19383441-19387190	1	-	19384461	19387118	789624	6	1268,183,97,155,79,150,	0,1657,1916,2868,3318,3599,
#Partially deleted in new
chr17	19383441	19386932	chr17:19383441-19386932	1	-	19384461	19386919	789624	5	1268,183,97,155,173,	0,1657,1916,2868,3318,
#Deleted in new
chr17	19383445	19384229	chr17:19383445-19384229	0	-	19383445	19383445	8553170	2	167,432,	0,352,
#Partially deleted in new
chr17	19384414	19387190	chr17:19384414-19387190	0	-	19384414	19384414	8553170	5	295,356,155,79,41,	0,684,1895,2345,2735,
#Deleted in new
chr17	19411124	19412772	chr17:19411124-19412772	0	+	19411408	19412772	789624	4	71,153,41,275,	0,185,505,1373,
#Deleted in new
chr17	19411177	19413408	chr17:19411177-19413408	0	+	19411177	19411177	8553170	4	285,41,286,471,	0,452,1320,1760,
#Deleted in new
chr17	19411193	19417276	chr17:19411193-19417276	3	+	19411408	19416175	789624	14	269,41,286,207,132,105,51,57,75,118,170,54,75,1572,	0,436,1304,1744,2086,2383,2901,3255,3392,3576,3844,4092,4324,4511,
#Deleted in new
chr17	19411689	19413398	chr17:19411689-19413398	0	+	19411689	19411689	8553170	3	142,286,119,	0,808,1590,
#Deleted in new
chr17	19411785	19413118	chr17:19411785-19413118	3	-	19411785	19411785	8553170	2	18,549,	0,784,
#Deleted in new
chr17	19415423	19415961	chr17:19415423-19415961	0	+	19415423	19415423	8553170	2	169,257,	0,281,
#Partially deleted in new
chr17	19417803	19453603	chr17:19417803-19453603	0	-	19417803	19417803	8553170	4	251,227,83,19,	0,925,5743,35781,
#Partially deleted in new
chr17	19419034	19424357	chr17:19419034-19424357	3	+	19419034	19419034	8553170	2	146,374,	0,4949,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19420278	19420342	chr17:19420278-19420342	3	+	19420278	19420278	8553170	1	64,	0,
#Partially deleted in new
chr17	19439142	19460735	chr17:19439142-19460735	1	-	19439142	19439142	8553170	3	332,76,33,	0,14442,21560,
#Deleted in new
chr17	19445969	19446852	chr17:19445969-19446852	7	-	19445969	19445969	16724991	1	883,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	19448114	19460992	chr17:19448114-19460992	1	-	19448114	19448114	8553170	2	453,290,	0,12588,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	19448157	19450417	chr17:19448157-19450417	0	-	19448157	19448157	8553170	2	410,662,	0,1598,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	19448178	19460995	chr17:19448178-19460995	0	-	19448178	19448178	8553170	4	463,76,138,293,	0,5406,7689,12524,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	19448178	19456307	chr17:19448178-19456307	0	-	19448178	19448178	8553170	2	389,440,	0,7689,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	19448178	19492991	chr17:19448178-19492991	0	-	19448178	19448178	8553170	3	389,220,140,	0,38667,44673,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	19448241	19460984	chr17:19448241-19460984	1	-	19448241	19448241	8553170	3	326,76,282,	0,5343,12461,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	19448474	19453421	chr17:19448474-19453421	1	-	19448474	19448474	8553170	2	167,666,	0,4281,
#Partially deleted in new
chr17	19471118	19492960	chr17:19471118-19492960	1	-	19471118	19471118	8553170	3	156,220,109,	0,15727,21733,
#Partially deleted in new
chr17	19495384	19555309	chr17:19495384-19555309	0	+	19495384	19495384	8553170	7	97,102,69,149,43,45,98,	0,47008,51050,52600,54250,56039,59827,
#Partially deleted in new
chr17	19496942	19497528	chr17:19496942-19497528	7	+	19496942	19496942	16724991	1	586,	0,
#Partially deleted in new
chr17	19533461	19577597	chr17:19533461-19577597	1	+	19548123	19577553	789624	13	110,102,69,149,43,45,170,68,109,76,70,133,271,	0,8931,12973,14523,16173,17962,22278,22533,26726,26956,33328,33634,43865,
#Partially deleted in new
chr17	19533827	19577611	chr17:19533827-19577611	1	+	19533939	19577336	789624	15	247,102,149,43,45,98,98,114,68,109,76,70,133,82,285,	0,8565,14157,15807,17596,21384,21765,21968,22167,26360,26590,32962,33268,38952,43499,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr17	19533853	19579034	chr17:19533853-19579034	3	+	19533939	19577553	789624	17	221,102,69,149,43,45,98,98,114,68,109,76,70,133,95,82,1708,	0,8539,12581,14131,15781,17570,21358,21739,21942,22141,26334,26564,32936,33242,37624,38926,43473,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19533859	19535614	chr17:19533859-19535614	0	+	19533859	19533859	8553170	1	1755,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	19533875	19578906	chr17:19533875-19578906	1	+	19533939	19577553	789624	7	199,102,69,149,43,82,1580,	0,8517,12559,14109,15759,38904,43451,
#Partially deleted in new
chr17	19533875	19548104	chr17:19533875-19548104	0	+	19533875	19533875	8553170	5	199,102,69,58,120,	0,8517,12559,13110,14109,
#Partially deleted in new
chr17	19555508	19577640	chr17:19555508-19577640	0	+	19555508	19555508	8553170	8	182,114,68,109,76,70,133,314,	0,287,486,4679,4909,11281,11587,21818,
#Partially deleted in new
chr17	19555572	19577937	chr17:19555572-19577937	0	+	19555572	19555572	8553170	9	118,68,109,76,70,133,95,82,611,	0,422,4615,4845,11217,11523,15905,17207,21754,
#Partially deleted in new
chr17	19555831	19577829	chr17:19555831-19577829	0	+	19555831	19555831	8553170	8	231,127,76,70,133,95,82,503,	0,4338,4586,10958,11264,15646,16948,21495,
#Deleted in new
chr17	19557210	19557911	chr17:19557210-19557911	3	+	19557210	19557210	8553170	1	701,	0,
#Deleted in new
chr17	19557559	19557711	chr17:19557559-19557711	0	+	19557559	19557559	789624	1	152,	0,
#Partially deleted in new
chr17	19560110	19597922	chr17:19560110-19597922	3	-	19560110	19560110	8553170	4	415,107,182,26,	0,4412,10734,37786,
#Deleted in new
chr17	19567138	19568084	chr17:19567138-19568084	0	+	19567138	19567138	8553170	2	90,365,	0,581,
#Partially deleted in new
chr17	19579942	19596058	chr17:19579942-19596058	7	+	19579942	19579942	16724991	5	170,102,114,68,46,	0,291,14267,15915,16070,
#Partially deleted in new
chr17	19579988	19595929	chr17:19579988-19595929	5	+	19579988	19579988	16724991	8	347,69,148,43,45,96,125,72,	0,6635,8470,9816,10755,11776,14221,15869,
#Partially deleted in new
chr17	19581426	19590690	chr17:19581426-19590690	4	+	19581426	19581426	16724991	3	129,43,236,	0,8378,9028,
#Deleted in new
chr17	19582115	19582275	chr17:19582115-19582275	7	-	19582115	19582115	16724991	1	160,	0,
#Partially deleted in new
chr17	19600859	19601345	chr17:19600859-19601345	7	+	19600859	19600859	16724991	2	99,83,	0,403,
#Partially deleted in new
chr17	19601839	19602256	chr17:19601839-19602256	7	+	19601839	19601839	16724991	2	61,43,	0,374,
#Deleted in new
chr17	19602258	19603208	chr17:19602258-19603208	7	+	19602258	19602258	16724991	1	950,	0,
#Deleted in new
chr17	19603273	19603345	chr17:19603273-19603345	7	-	19603273	19603273	16724991	1	72,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19603796	19605048	chr17:19603796-19605048	7	+	19603796	19603796	16724991	1	1252,	0,
#Deleted in new
chr17	19605453	19605933	chr17:19605453-19605933	7	+	19605453	19605453	16724991	1	480,	0,
#Partially deleted in new
chr17	19615788	19633132	chr17:19615788-19633132	7	+	19615788	19615788	16724991	5	100,100,133,86,72,	0,9054,10052,14878,17272,
#Partially deleted in new
chr17	19629450	19633825	chr17:19629450-19633825	5	+	19629450	19629450	16724991	4	235,95,55,765,	0,1216,3246,3610,
#Partially deleted in new
chr17	19648135	19656392	chr17:19648135-19656392	0	+	19648971	19656392	789624	5	130,190,232,86,27,	0,799,3411,4411,8230,
#Partially deleted in new
chr17	19648145	19652655	chr17:19648145-19652655	0	+	19648145	19648145	8553170	4	120,190,232,109,	0,789,3401,4401,
#Partially deleted in new
chr17	19648173	19652600	chr17:19648173-19652600	0	+	19648971	19652600	789624	4	92,162,232,54,	0,789,3373,4373,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	19648525	19677596	chr17:19648525-19677596	3	+	19648971	19675572	0	10	599,232,86,209,118,142,167,100,236,2039,	0,3021,4021,7840,9219,12601,14807,16422,23195,27032,
#Partially deleted in new
chr17	19648525	19655358	chr17:19648525-19655358	1	+	19648971	19655358	789624	4	599,232,86,78,	0,3021,4021,6755,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	19648525	19677590	chr17:19648525-19677590	1	+	19648971	19671795	789624	9	599,232,86,209,118,142,167,236,2033,	0,3021,4021,7840,9219,12601,14807,23195,27032,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	19648722	19677596	chr17:19648722-19677596	1	+	19648971	19675572	0	11	121,190,232,86,209,118,142,167,100,236,2039,	0,212,2824,3824,7643,9022,12404,14610,16225,22998,26835,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	19648722	19676525	chr17:19648722-19676525	1	+	19648971	19673234	0	12	402,232,86,209,118,142,167,100,236,125,4,964,	0,2824,3824,7643,9022,12404,14610,16225,22998,24428,26773,26839,
#Partially deleted in new
chr17	19648722	19676117	chr17:19648722-19676117	0	+	19648971	19671795	789624	10	402,232,86,209,118,142,167,236,4,556,	0,2824,3824,7643,9022,12404,14610,22998,26773,26839,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	19648750	19677596	chr17:19648750-19677596	1	+	19648971	19673234	0	11	374,232,86,209,118,142,167,100,236,125,2039,	0,2796,3796,7615,8994,12376,14582,16197,22970,24400,26807,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	19648750	19677598	chr17:19648750-19677598	1	+	19648971	19675572	0	11	80,172,232,86,209,118,142,167,100,236,2041,	0,202,2796,3796,7615,8994,12376,14582,16197,22970,26807,
#Partially deleted in new
chr17	19648750	19656370	chr17:19648750-19656370	0	+	19649067	19656370	789624	5	127,123,232,86,5,	0,251,2796,3796,7615,
#Partially deleted in new
chr17	19648777	19656459	chr17:19648777-19656459	0	+	19648971	19652558	789624	3	347,86,94,	0,3769,7588,
#Partially deleted in new
chr17	19648805	19675742	chr17:19648805-19675742	1	+	19663373	19675625	789624	9	319,232,86,209,118,142,167,100,185,	0,2741,3741,7560,8939,12321,14527,16142,26752,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	19648850	19677596	chr17:19648850-19677596	0	+	19648971	19655358	789624	11	274,232,86,107,209,118,142,167,100,236,2039,	0,2696,3696,6430,7515,8894,12276,14482,16097,22870,26707,
#Partially deleted in new
chr17	19648925	19652697	chr17:19648925-19652697	0	+	19648925	19648925	8553170	3	199,232,151,	0,2621,3621,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19649372	19649935	chr17:19649372-19649935	3	-	19649372	19649372	8553170	1	563,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19649493	19649587	chr17:19649493-19649587	3	-	19649493	19649493	8553170	1	94,	0,
#Partially deleted in new
chr17	19656144	19675747	chr17:19656144-19675747	0	+	19656144	19656144	8553170	7	430,118,142,167,100,236,190,	0,1600,4982,7188,8803,15576,19413,
#Partially deleted in new
chr17	19656401	19661442	chr17:19656401-19661442	0	+	19656401	19661324	789624	3	173,118,316,	0,1343,4725,
#Partially deleted in new
chr17	19656487	19663361	chr17:19656487-19663361	0	+	19656487	19663361	789624	4	87,142,142,29,	0,1233,4639,6845,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	19659572	19663499	chr17:19659572-19663499	0	+	19659572	19659572	8553170	3	127,142,167,	0,1554,3760,
#Deleted in new
chr17	19661999	19662090	chr17:19661999-19662090	3	+	19661999	19661999	8553170	1	91,	0,
#Partially deleted in new
chr17	19663373	19675921	chr17:19663373-19675921	1	+	19663373	19675625	789624	3	126,100,364,	0,1574,12184,
#Partially deleted in new
chr17	19663385	19675779	chr17:19663385-19675779	0	+	19663385	19671795	789624	3	114,236,222,	0,8335,12172,
#Partially deleted in new
chr17	19671767	19675742	chr17:19671767-19675742	0	+	19671767	19673268	789624	4	189,76,4,181,	0,1432,3728,3794,
#Partially deleted in new
chr17	19671798	19675907	chr17:19671798-19675907	0	+	19671798	19673224	789624	3	158,69,350,	0,1408,3759,
#Partially deleted in new
chr17	19672351	19675880	chr17:19672351-19675880	0	+	19672351	19672351	8553170	3	80,125,323,	0,799,3206,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19674083	19677595	chr17:19674083-19677595	0	+	19674083	19674083	8553170	1	3512,	0,
#Partially deleted in new
chr17	19678287	19716606	chr17:19678287-19716606	3	-	19678685	19716555	789624	17	619,88,95,133,70,76,109,68,114,98,206,45,43,149,69,102,174,	0,1664,3079,3250,24317,24804,25782,27148,28360,29458,30014,30428,34415,35537,36433,36828,38145,
#Partially deleted in new
chr17	19678314	19718979	chr17:19678314-19718979	0	-	19678314	19678314	789624	16	592,88,95,133,70,109,68,114,98,98,45,43,149,69,102,869,	0,1637,3052,3223,24290,25755,27121,28333,29431,29987,30401,34388,35510,36406,36801,39796,
#Partially deleted in new
chr17	19678314	19716566	chr17:19678314-19716566	0	-	19678314	19678314	8553170	17	592,88,304,70,76,109,42,68,114,98,98,45,43,149,69,102,134,	0,1637,3052,24290,24777,25755,26338,27121,28333,29431,29987,30401,34388,35510,36406,36801,38118,
#Partially deleted in new
chr17	19678318	19716730	chr17:19678318-19716730	1	-	19678685	19716555	789624	18	588,88,95,133,70,76,109,42,68,114,98,98,45,43,149,69,102,298,	0,1633,3048,3219,24286,24773,25751,26334,27117,28329,29427,29983,30397,34384,35506,36402,36797,38114,
#Partially deleted in new
chr17	19678520	19716573	chr17:19678520-19716573	0	-	19708424	19716555	789624	16	386,88,95,133,70,109,68,114,98,252,45,43,149,69,102,141,	0,1431,2846,3017,24084,25549,26915,28127,29225,29781,30195,34182,35304,36200,36595,37912,
#Partially deleted in new
chr17	19703096	19716730	chr17:19703096-19716730	0	-	19703096	19716555	789624	12	71,109,68,114,98,98,45,43,149,69,102,298,	0,973,2339,3551,4649,5205,5619,9606,10728,11624,12019,13336,
#Partially deleted in new
chr17	19703109	19714878	chr17:19703109-19714878	0	-	19703109	19703109	8553170	10	58,109,68,114,98,123,45,43,149,158,	0,960,2326,3538,4636,5192,5606,9593,10715,11611,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	19705010	19717443	chr17:19705010-19717443	0	-	19705010	19705010	8553170	9	493,114,98,459,43,149,69,102,1011,	0,1637,2735,3291,7692,8814,9710,10105,11422,
#Partially deleted in new
chr17	19714446	19716652	chr17:19714446-19716652	0	-	19714446	19714446	8553170	2	771,220,	0,1986,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19715723	19718837	chr17:19715723-19718837	0	-	19715723	19715723	8553170	1	3114,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19719058	19722428	chr17:19719058-19722428	3	+	19719058	19719058	8553170	1	3370,	0,
#Partially deleted in new
chr17	19737681	19738542	chr17:19737681-19738542	3	+	19737681	19737681	8553170	2	259,187,	0,674,
#Partially deleted in new
chr17	19737983	19748433	chr17:19737983-19748433	3	-	19738220	19745129	0	11	252,131,100,167,142,118,209,86,232,167,175,	0,339,1012,1524,2352,3109,4020,4561,5248,6984,10275,
#Partially deleted in new
chr17	19737983	19748341	chr17:19737983-19748341	1	-	19738220	19745129	789624	10	252,131,100,117,118,209,86,232,167,83,	0,339,1012,1524,3109,4020,4561,5248,6984,10275,
#Partially deleted in new
chr17	19737983	19748341	chr17:19737983-19748341	0	-	19738378	19745129	789624	10	252,131,167,142,118,209,86,232,167,83,	0,339,1524,2352,3109,4020,4561,5248,6984,10275,
#Partially deleted in new
chr17	19737983	19748364	chr17:19737983-19748364	0	-	19737983	19737983	8553170	9	252,131,100,167,142,118,209,919,106,	0,339,1012,1524,2352,3109,4020,4561,10275,
#Partially deleted in new
chr17	19737983	19748393	chr17:19737983-19748393	1	-	19738220	19743406	789624	10	252,131,100,167,142,118,209,86,232,135,	0,339,1012,1524,2352,3109,4020,4561,5248,10275,
#Partially deleted in new
chr17	19737986	19745612	chr17:19737986-19745612	1	-	19738220	19745129	0	11	249,131,100,167,142,118,209,86,232,167,170,	0,336,1009,1521,2349,3106,4017,4558,5245,6981,7456,
#Partially deleted in new
chr17	19737987	19745459	chr17:19737987-19745459	1	-	19738220	19745129	0	10	248,131,100,167,142,118,209,86,232,492,	0,335,1008,1520,2348,3105,4016,4557,5244,6980,
#Partially deleted in new
chr17	19739507	19745680	chr17:19739507-19745680	0	-	19739507	19745129	789624	8	167,142,118,209,86,232,167,238,	0,828,1585,2496,3037,3724,5460,5935,
#Partially deleted in new
chr17	19740174	19741356	chr17:19740174-19741356	0	-	19740174	19740174	8553170	2	303,264,	0,918,
#Partially deleted in new
chr17	19740370	19743500	chr17:19740370-19743500	0	-	19740370	19740370	8553170	5	107,139,209,86,269,	0,722,1633,2174,2861,
#Partially deleted in new
chr17	19741092	19745133	chr17:19741092-19745133	0	-	19741092	19745129	789624	5	118,209,86,232,136,	0,911,1452,2139,3905,
#Partially deleted in new
chr17	19742625	19748298	chr17:19742625-19748298	0	-	19742625	19742625	8553170	3	103,232,40,	0,606,5633,
#Partially deleted in new
chr17	19743030	19745146	chr17:19743030-19745146	0	-	19743030	19743030	8553170	2	433,179,	0,1937,
#Partially deleted in new
chr17	19743231	19748943	chr17:19743231-19748943	0	-	19743231	19745129	789624	4	232,167,315,145,	0,1736,4670,5567,
#Partially deleted in new
chr17	19743266	19745412	chr17:19743266-19745412	0	-	19743266	19745129	789624	3	197,167,36,	0,1701,2110,
#Partially deleted in new
chr17	19743401	19748293	chr17:19743401-19748293	0	-	19743401	19745129	789624	3	62,167,358,	0,1566,4534,
#Deleted in new
chr17	19744821	19745612	chr17:19744821-19745612	0	-	19744821	19744821	8553170	2	313,170,	0,621,
#Partially deleted in new
chr17	19755243	19756207	chr17:19755243-19756207	7	+	19755243	19755243	16724991	1	964,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19770828	19773924	chr17:19770828-19773924	0	-	19770828	19770828	8553170	1	3096,	0,
#Partially deleted in new
chr17	19770829	19867936	chr17:19770829-19867936	3	-	19776348	19867417	789624	28	238,99,136,158,119,179,209,150,104,188,287,81,146,138,61,172,89,48,83,59,102,74,174,37,33,42,93,609,	0,5479,6751,9642,10156,11059,12867,15107,24792,25265,26566,28665,30947,33863,39548,45919,54264,55309,67671,70659,72291,74474,75907,78539,78912,93973,94906,96498,
#Partially deleted in new
chr17	19773949	19867917	chr17:19773949-19867917	1	-	19776348	19867417	789624	27	2458,136,158,119,179,209,150,104,188,287,81,146,138,61,172,89,48,83,59,102,74,174,37,33,42,93,590,	0,3631,6522,7036,7939,9747,11987,21672,22145,23446,25545,27827,30743,36428,42799,51144,52189,64551,67539,69171,71354,72787,75419,75792,90853,91786,93378,
#Partially deleted in new
chr17	19781085	19784060	chr17:19781085-19784060	0	-	19781085	19781085	8553170	3	19,179,364,	0,803,2611,
#Partially deleted in new
chr17	19781888	19796127	chr17:19781888-19796127	0	-	19781888	19796127	789624	5	179,209,69,104,33,	0,1808,4048,13733,14206,
#Partially deleted in new
chr17	19781960	19796289	chr17:19781960-19796289	0	-	19781960	19781960	8553170	4	107,209,104,195,	0,1736,13661,14134,
#Partially deleted in new
chr17	19797574	19838504	chr17:19797574-19838504	0	-	19797574	19797574	8553170	7	108,81,146,138,61,89,4,	0,1920,4202,7118,12803,27519,40926,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	19804726	19811237	chr17:19804726-19811237	0	-	19804726	19804726	8553170	3	104,61,328,	0,5651,6183,
#Partially deleted in new
chr17	19816465	19843138	chr17:19816465-19843138	0	-	19816465	19816465	8553170	7	23,172,89,48,83,59,18,	0,283,8628,9673,22035,25023,26655,
#Partially deleted in new
chr17	19838529	19849379	chr17:19838529-19849379	0	-	19848291	19849379	789624	7	54,59,102,74,174,90,11,	0,2959,4591,6774,8207,9725,10839,
#Partially deleted in new
chr17	19840125	19840515	chr17:19840125-19840515	7	+	19840125	19840125	16724991	1	390,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	19841539	19864836	chr17:19841539-19864836	0	-	19860941	19864836	789624	8	8,102,74,174,37,33,115,34,	0,1581,3764,5197,7829,8202,19401,23263,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19855746	19856164	chr17:19855746-19856164	3	+	19855746	19855746	8553170	1	418,	0,
#Deleted in new
chr17	19868567	19868689	chr17:19868567-19868689	3	+	19868567	19868567	8553170	1	122,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19896589	19897270	chr17:19896589-19897270	3	-	19896589	19896589	8553170	1	681,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	19896723	19897287	chr17:19896723-19897287	1	-	19896723	19896723	8553170	2	213,262,	0,302,
#Partially deleted in new
chr17	19904301	19977837	chr17:19904301-19977837	3	-	19906226	19977679	0	15	1931,96,53,83,110,174,145,137,124,85,99,558,183,48,246,	0,4879,5624,15734,20106,27503,31984,35411,36585,37524,43105,53712,58538,64112,73290,
#Partially deleted in new
chr17	19906167	19931877	chr17:19906167-19931877	0	-	19924491	19931877	789624	6	65,96,53,83,105,73,	0,3013,3758,13868,18240,25637,
#Partially deleted in new
chr17	19906226	19977679	chr17:19906226-19977679	1	-	19906226	19977679	789624	14	6,96,53,83,110,145,137,124,85,99,558,183,48,88,	0,2954,3699,13809,18181,30059,33486,34660,35599,41180,51787,56613,62187,71365,
#Partially deleted in new
chr17	19909238	19931866	chr17:19909238-19931866	0	-	19909238	19931866	789624	4	38,53,83,62,	0,687,10797,22566,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	19929371	19929737	chr17:19929371-19929737	3	-	19929371	19929371	8553170	1	366,	0,
#Partially deleted in new
chr17	19936001	19947475	chr17:19936001-19947475	0	-	19939824	19947475	789624	4	429,137,85,69,	0,3711,5824,11405,
#Partially deleted in new
chr17	19940897	19977828	chr17:19940897-19977828	0	-	19958433	19977679	789624	7	113,85,99,554,183,48,237,	0,928,6509,17116,21942,27516,36694,
#Partially deleted in new
chr17	19947140	19958124	chr17:19947140-19958124	0	-	19947140	19947140	8553170	2	365,111,	0,10873,
#Partially deleted in new
chr17	19958334	19978343	chr17:19958334-19978343	0	-	19958334	19958334	8553170	4	237,183,48,110,	0,4505,10079,19899,
#Partially deleted in new
chr17	19958424	19977828	chr17:19958424-19977828	0	-	19962901	19977679	789624	4	147,127,48,237,	0,4415,9989,19167,
#Partially deleted in new
chr17	19958443	19977828	chr17:19958443-19977828	0	-	19958443	19977679	789624	4	128,152,48,237,	0,4396,9970,19148,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	20008050	20009234	chr17:20008050-20009234	3	-	20008050	20008050	8553170	1	1184,	0,
#Partially deleted in new
chr17	20009343	20236904	chr17:20009343-20236904	0	+	20009343	20009343	8553170	5	81,208,74,206,45,	0,218069,222414,222856,227516,
#Partially deleted in new
chr17	20009362	20314138	chr17:20009362-20314138	3	+	20096651	20314065	789624	15	62,168,136,1580,208,74,206,146,101,82,157,103,117,60,163,	0,87268,101064,194970,218050,222395,222837,236563,237856,244142,248088,250829,287598,296660,304613,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	20009363	20204352	chr17:20009363-20204352	0	+	20096651	20204352	789624	5	61,185,168,136,20,	0,57830,87267,101063,194969,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	20009365	20110513	chr17:20009365-20110513	0	+	20096651	20110513	789624	5	59,116,141,168,87,	0,8621,48311,87265,101061,
#Partially deleted in new
chr17	20009378	20204447	chr17:20009378-20204447	0	+	20096651	20204447	789624	5	46,116,168,136,115,	0,8608,87252,101048,194954,
#Partially deleted in new
chr17	20009862	20096708	chr17:20009862-20096708	0	+	20096651	20096708	789624	2	355,78,	0,86768,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	20017144	20096715	chr17:20017144-20096715	0	+	20096651	20096715	789624	3	461,116,85,	0,842,79486,
#Deleted in new
chr17	20056286	20056630	chr17:20056286-20056630	7	+	20056286	20056286	16724991	1	344,	0,
#Partially deleted in new
chr17	20073564	20204465	chr17:20073564-20204465	0	+	20073564	20073564	8553170	4	137,168,136,133,	0,23066,36862,130768,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	20087020	20239427	chr17:20087020-20239427	1	+	20096651	20236881	789624	8	31,168,136,1580,208,74,206,2568,	0,9610,23406,117312,140392,144737,145179,149839,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	20087021	20314755	chr17:20087021-20314755	1	+	20096651	20314065	789624	15	30,168,136,1580,208,74,206,146,101,82,157,103,117,60,780,	0,9609,23405,117311,140391,144736,145178,158904,160197,166483,170429,173170,209939,219001,226954,
#Partially deleted in new
chr17	20095691	20204356	chr17:20095691-20204356	0	+	20096651	20204356	789624	4	346,168,136,24,	0,939,14735,108641,
#Partially deleted in new
chr17	20095692	20110500	chr17:20095692-20110500	0	+	20096651	20110500	789624	3	220,168,74,	0,938,14734,
#Deleted in new
chr17	20111823	20112990	chr17:20111823-20112990	7	+	20111823	20111823	16724991	1	1167,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	20126387	20126488	chr17:20126387-20126488	3	-	20126387	20126387	8553170	1	101,	0,
#Partially deleted in new
chr17	20155337	20204738	chr17:20155337-20204738	0	+	20155337	20155337	8553170	2	174,406,	0,48995,
#Partially deleted in new
chr17	20155741	20204657	chr17:20155741-20204657	0	+	20155741	20155741	8553170	2	136,325,	0,48591,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	20155988	20319026	chr17:20155988-20319026	1	+	20156196	20314065	789624	13	248,1580,208,74,206,146,101,82,157,103,117,60,5051,	0,48344,71424,75769,76211,89937,91230,97516,101462,104203,140972,150034,157987,
#Partially deleted in new
chr17	20155993	20232405	chr17:20155993-20232405	0	+	20156196	20227450	789624	4	243,208,74,206,	0,71419,75764,76206,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	20156082	20237610	chr17:20156082-20237610	1	+	20156196	20232409	789624	6	154,1580,208,74,215,751,	0,48250,71330,75675,76117,80777,
#Partially deleted in new
chr17	20156088	20237179	chr17:20156088-20237179	1	+	20156196	20236881	789624	6	148,1580,208,74,206,320,	0,48244,71324,75669,76111,80771,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	20205535	20314710	chr17:20205535-20314710	0	+	20205535	20314065	789624	11	377,208,74,206,146,101,82,157,103,60,735,	0,21877,26222,26664,40390,41683,47969,51915,54656,100487,108440,
#Partially deleted in new
chr17	20205739	20237176	chr17:20205739-20237176	0	+	20205739	20236947	789624	4	173,208,74,277,	0,21673,26018,31160,
#Partially deleted in new
chr17	20205795	20237148	chr17:20205795-20237148	1	+	20205795	20232409	789624	5	117,208,74,252,289,	0,21617,25962,26404,31064,
#Deleted in new
chr17	20290256	20290358	chr17:20290256-20290358	3	+	20290256	20290256	8553170	1	102,	0,
#Partially deleted in new
chr17	20297033	20306173	chr17:20297033-20306173	0	+	20297033	20306118	789624	2	44,151,	0,8989,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	20305651	20314734	chr17:20305651-20314734	0	+	20305651	20305651	8553170	2	431,759,	0,8324,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	20321163	20338086	chr17:20321163-20338086	5	+	20321163	20321163	16724991	3	497,71,2255,	0,3019,14668,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr17	20321316	20403557	chr17:20321316-20403557	7	+	20321316	20321316	16724991	19	344,71,249,74,137,182,34,142,218,184,129,945,138,294,221,210,43,110,1502,	0,2866,14515,16840,21041,27241,29621,29940,36562,40867,41605,43769,46296,70158,71047,72704,79204,79822,80739,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	20323000	20323110	chr17:20323000-20323110	3	+	20323000	20323000	8553170	1	110,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	20323057	20323337	chr17:20323057-20323337	3	+	20323057	20323057	8553170	1	280,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	20339891	20342825	chr17:20339891-20342825	4	+	20339891	20339891	16724991	2	428,468,	0,2466,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	20340742	20341045	chr17:20340742-20341045	3	+	20340742	20340742	8553170	1	303,	0,
#Partially deleted in new
chr17	20375368	20376393	chr17:20375368-20376393	5	-	20375368	20375368	16724991	2	467,263,	0,762,
#Partially deleted in new
chr17	20375708	20376840	chr17:20375708-20376840	7	-	20375708	20375708	16724991	1	1132,	0,
#Partially deleted in new
chr17	20415546	20424642	chr17:20415546-20424642	7	+	20415546	20415546	16724991	4	133,200,227,51,	0,945,4832,9045,
#Deleted in new
chr17	20415791	20416697	chr17:20415791-20416697	7	-	20415791	20415791	16724991	2	163,181,	0,725,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	20416096	20417288	chr17:20416096-20417288	4	+	20416096	20416096	16724991	1	1192,	0,
#Partially deleted in new
chr17	20416652	20424704	chr17:20416652-20424704	4	+	20416652	20416652	16724991	4	39,209,227,113,	0,1530,3726,7939,
#Partially deleted in new
chr17	20424588	20431008	chr17:20424588-20431008	5	+	20424588	20424588	16724991	5	195,289,426,93,171,	0,2202,3923,5020,6249,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	20433205	20434285	chr17:20433205-20434285	3	+	20433205	20433205	8553170	2	52,249,	0,831,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	20436336	20447249	chr17:20436336-20447249	7	+	20436336	20436336	16724991	5	2299,208,87,149,585,	0,4690,6451,7509,10328,
#Partially deleted in new
chr17	20441026	20446772	chr17:20441026-20446772	5	+	20441026	20441026	16724991	6	208,87,122,149,193,108,	0,1761,2247,2819,3924,5638,
#Partially deleted in new
chr17	20449394	20467534	chr17:20449394-20467534	1	-	20449972	20467470	789624	11	725,163,89,45,51,36,96,111,202,92,103,	0,2086,2400,2956,3622,4177,5908,7166,8788,10957,18037,
#Partially deleted in new
chr17	20449862	20467535	chr17:20449862-20467535	3	-	20449972	20467470	789624	11	257,163,89,42,51,36,96,111,202,92,104,	0,1618,1932,2488,3154,3709,5440,6698,8320,10489,17569,
#Partially deleted in new
chr17	20449905	20467539	chr17:20449905-20467539	0	-	20458315	20467470	789624	10	214,163,89,45,51,36,96,111,202,108,	0,1575,1889,2445,3111,3666,5397,6655,8277,17526,
#Deleted in new
chr17	20451600	20452171	chr17:20451600-20452171	0	-	20451600	20451600	8553170	2	115,377,	0,194,
#Deleted in new
chr17	20451821	20453473	chr17:20451821-20453473	0	-	20451821	20451821	8553170	3	62,45,457,	0,529,1195,
#Deleted in new
chr17	20481329	20483991	chr17:20481329-20483991	7	-	20481329	20481329	16724991	1	2662,	0,
#Deleted in new
chr17	20491322	20491443	chr17:20491322-20491443	7	-	20491322	20491322	16724991	1	121,	0,
#Deleted in new
chr17	20493633	20494155	chr17:20493633-20494155	7	-	20493633	20493633	16724991	1	522,	0,
#Deleted in new
chr17	20501512	20504481	chr17:20501512-20504481	5	-	20501512	20501512	16724991	7	251,47,649,161,157,83,591,	0,411,552,1290,1565,1859,2378,
#Deleted in new
chr17	20501512	20502287	chr17:20501512-20502287	5	-	20501512	20501512	16724991	2	458,223,	0,552,
#Deleted in new
chr17	20501668	20504283	chr17:20501668-20504283	5	-	20501668	20501668	16724991	8	95,47,221,126,161,157,83,393,	0,255,396,919,1134,1409,1703,2222,
#Partially deleted in new
chr17	20502538	20512357	chr17:20502538-20512357	7	-	20502538	20502538	16724991	7	175,161,157,83,184,158,94,	0,264,539,833,1352,1998,9725,
#Duplicated in new
chr17	20507412	20508931	chr17:20507412-20508931	3	-	20507412	20507412	8553170	1	1519,	0,
#Deleted in new
chr17	20512559	20517479	chr17:20512559-20517479	7	-	20512559	20512559	16724991	8	95,44,221,126,162,67,73,432,	0,925,1069,1376,2005,2774,3359,4488,
#Deleted in new
chr17	20514633	20516237	chr17:20514633-20516237	4	-	20514633	20514633	16724991	3	93,154,319,	0,700,1285,
#Partially deleted in new
chr17	20519311	20528687	chr17:20519311-20528687	7	-	20519311	20519311	16724991	8	302,149,237,115,633,681,83,134,	0,460,1548,2033,2284,4088,7445,9242,
#Partially deleted in new
chr17	20519520	20523747	chr17:20519520-20523747	5	-	20519520	20519520	16724991	6	93,149,237,115,162,348,	0,251,1339,1824,2546,3879,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	20522091	20524449	chr17:20522091-20524449	4	-	20522091	20522091	16724991	4	137,124,85,217,	0,1308,1907,2141,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	20522817	20524449	chr17:20522817-20524449	4	-	20522817	20522817	16724991	4	71,166,113,217,	0,582,1153,1415,
#Deleted in new
chr17	20526101	20526210	chr17:20526101-20526210	7	+	20526101	20526101	16724991	1	109,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	20530041	20530881	chr17:20530041-20530881	3	-	20530041	20530041	8553170	1	840,	0,
#Deleted in new
chr17	20532247	20532881	chr17:20532247-20532881	7	-	20532247	20532247	16724991	1	634,	0,
#Deleted in new
chr17	20542973	20544123	chr17:20542973-20544123	7	-	20542973	20542973	16724991	3	224,54,78,	0,502,1072,
#Deleted in new
chr17	20543480	20550963	chr17:20543480-20550963	7	-	20543480	20543480	16724991	12	152,97,66,95,121,49,141,83,81,40,83,72,	0,522,1082,1534,2342,2989,4287,4752,5286,5839,7166,7411,
#Deleted in new
chr17	20545370	20549952	chr17:20545370-20549952	3	+	20545370	20545370	8553170	1	4582,	0,
#Deleted in new
chr17	20554136	20554380	chr17:20554136-20554380	7	+	20554136	20554136	16724991	1	244,	0,
#Deleted in new
chr17	20554970	20555559	chr17:20554970-20555559	5	-	20554970	20554970	16724991	1	589,	0,
#Partially deleted in new
chr17	20555426	20559410	chr17:20555426-20559410	7	-	20555426	20555426	16724991	3	157,63,63,	0,730,3921,
#Deleted in new
chr17	20564537	20564889	chr17:20564537-20564889	7	+	20564537	20564537	16724991	1	352,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	20576666	20578748	chr17:20576666-20578748	3	-	20576666	20576666	8553170	2	231,122,	0,1960,
#Deleted in new
chr17	20579723	20580911	chr17:20579723-20580911	3	+	20579743	20580729	789624	2	285,763,	0,425,
#Partially deleted in new
chr17	20583757	20591180	chr17:20583757-20591180	7	-	20583757	20583757	16724991	3	851,1143,44,	0,1556,7379,
#Deleted in new
chr17	20589292	20590367	chr17:20589292-20590367	7	+	20589292	20589292	16724991	1	1075,	0,
#Deleted in new
chr17	20595530	20595708	chr17:20595530-20595708	7	+	20595530	20595530	16724991	1	178,	0,
#Deleted in new
chr17	20609461	20609610	chr17:20609461-20609610	7	-	20609461	20609461	16724991	1	149,	0,
#Deleted in new
chr17	20612666	20614008	chr17:20612666-20614008	7	+	20612666	20612666	16724991	1	1342,	0,
#Partially deleted in new
chr17	20612911	20633234	chr17:20612911-20633234	3	-	20612911	20612911	8553170	4	163,181,78,198,	0,1576,18560,20125,
#Deleted in new
chr17	20633033	20633259	chr17:20633033-20633259	7	-	20633033	20633033	16724991	1	226,	0,
#Partially deleted in new
chr17	20647286	20681799	chr17:20647286-20681799	7	+	20647286	20647286	16724991	6	225,81,223,110,100,96,	0,4252,4690,19317,20922,34417,
#Deleted in new
chr17	20710424	20710533	chr17:20710424-20710533	7	-	20710424	20710424	16724991	1	109,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	20716480	20725644	chr17:20716480-20725644	5	+	20716480	20716480	16724991	6	150,55,257,101,123,31,	0,4050,4730,5554,8115,9133,
#Partially deleted in new
chr17	20716482	20737127	chr17:20716482-20737127	7	+	20716482	20716482	16724991	11	148,55,101,55,113,107,63,78,108,112,233,	0,4048,5552,8113,8354,9131,10132,10380,14720,19253,20412,
#Partially deleted in new
chr17	20743332	20754501	chr17:20743332-20754501	7	-	20743332	20743332	16724991	8	73,102,66,159,118,101,79,354,	0,1726,4173,4914,5991,8038,10530,10815,
#Partially deleted in new
chr17	20771057	20771427	chr17:20771057-20771427	7	-	20771057	20771057	16724991	1	370,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	20775641	20776905	chr17:20775641-20776905	7	+	20775641	20775641	16724991	1	1264,	0,
#Deleted in new
chr17	20784644	20785725	chr17:20784644-20785725	7	+	20784644	20784644	16724991	1	1081,	0,
#Deleted in new
chr17	20788070	20789584	chr17:20788070-20789584	3	+	20788070	20788070	8553170	1	1514,	0,
#Deleted in new
chr17	20789216	20789595	chr17:20789216-20789595	7	-	20789216	20789216	16724991	1	379,	0,
#Partially deleted in new
chr17	20814619	20844257	chr17:20814619-20844257	7	+	20814619	20814619	16724991	4	109,533,180,222,	0,26404,29137,29416,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	20836446	20868208	chr17:20836446-20868208	0	-	20836446	20836446	8553170	5	89,135,91,128,308,	0,530,28972,30129,31454,
#Deleted in new
chr17	20855945	20857317	chr17:20855945-20857317	3	+	20855945	20855945	8553170	1	1372,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	20863394	20896140	chr17:20863394-20896140	0	-	20863394	20863394	8553170	4	2115,156,71,464,	0,3153,29997,32282,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	20863477	20895953	chr17:20863477-20895953	2	-	20863477	20863477	8553170	4	2030,156,71,277,	0,3070,29914,32199,
#Partially deleted in new
chr17	20865414	20896020	chr17:20865414-20896020	1	-	20865414	20896020	789624	4	95,156,71,344,	0,1133,27977,30262,
#Deleted in new
chr17	20866662	20868225	chr17:20866662-20868225	0	-	20866662	20866662	8553170	3	41,81,321,	0,508,1242,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	20868432	20905230	chr17:20868432-20905230	1	+	20868432	20868432	8553170	4	253,258,203,3013,	0,19159,23797,33785,
#Partially deleted in new
chr17	20868496	20994142	chr17:20868496-20994142	0	+	20868496	20868496	8553170	4	189,101,138,53,	0,89805,112990,125593,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	20868504	20924425	chr17:20868504-20924425	0	+	20868504	20868504	8553170	4	181,258,203,67,	0,19087,23725,55854,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	20868542	20899131	chr17:20868542-20899131	0	+	20868542	20868542	8553170	4	143,258,203,152,	0,19049,23687,30437,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	20868546	20932818	chr17:20868546-20932818	3	+	20868546	20868546	8553170	5	139,258,203,179,105,	0,19045,23683,63046,64167,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	20868549	20905230	chr17:20868549-20905230	0	+	20868549	20868549	789624	3	136,203,3013,	0,23680,33668,
#Partially deleted in new
chr17	20893391	20896020	chr17:20893391-20896020	4	-	20893391	20893391	16724991	2	71,344,	0,2285,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	20894531	20894638	chr17:20894531-20894638	3	-	20894531	20894531	8553170	1	107,	0,
#Partially deleted in new
chr17	20901938	20902680	chr17:20901938-20902680	7	-	20901938	20901938	16724991	1	742,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	20921044	20930046	chr17:20921044-20930046	1	+	20921044	20921044	8553170	3	125,475,616,	0,3314,8386,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	20921151	20930046	chr17:20921151-20930046	0	+	20921151	20921151	8553170	2	18,616,	0,8279,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	20929754	20939519	chr17:20929754-20939519	0	+	20929754	20929754	8553170	3	213,179,1427,	0,1838,8338,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	20929755	20938522	chr17:20929755-20938522	0	+	20929755	20929755	8553170	3	212,179,430,	0,1837,8337,
#Deleted in new
chr17	20938022	20938344	chr17:20938022-20938344	7	-	20938022	20938022	16724991	1	322,	0,
#Partially deleted in new
chr17	20938519	20994292	chr17:20938519-20994292	0	+	20938519	20938519	8553170	4	141,76,101,203,	0,18114,19782,55570,
#Partially deleted in new
chr17	20938537	20982357	chr17:20938537-20982357	1	+	20938537	20938537	789624	6	123,339,160,76,101,871,	0,10565,17656,18096,19764,42949,
#Partially deleted in new
chr17	20938550	21002007	chr17:20938550-21002007	0	+	20938550	20938550	8553170	6	110,160,76,101,138,125,	0,17643,18083,19751,42936,63332,
#Partially deleted in new
chr17	20938565	20958389	chr17:20938565-20958389	0	+	20938565	20938565	8553170	4	95,388,76,88,	0,17400,18068,19736,
#Partially deleted in new
chr17	20938577	20998028	chr17:20938577-20998028	1	+	20938577	20938577	8553170	7	83,160,76,101,66,150,203,	0,17616,18056,19724,56909,57908,59248,
#Partially deleted in new
chr17	20949238	20979752	chr17:20949238-20979752	0	+	20949238	20949238	8553170	5	203,388,76,101,69,	0,6727,7395,9063,30445,
#Partially deleted in new
chr17	20951430	21002276	chr17:20951430-21002276	1	+	20951430	20951430	8553170	6	91,388,76,101,138,394,	0,4535,5203,6871,30056,50452,
#Partially deleted in new
chr17	20955816	20958326	chr17:20955816-20958326	0	+	20955816	20955816	8553170	3	537,76,25,	0,817,2485,
#Partially deleted in new
chr17	20956293	20958721	chr17:20956293-20958721	0	+	20956293	20956293	8553170	3	60,76,420,	0,340,2008,
#Partially deleted in new
chr17	20956681	20958404	chr17:20956681-20958404	7	+	20956681	20956681	16724991	2	143,103,	0,1620,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	20963721	20980238	chr17:20963721-20980238	3	+	20963721	20963721	8553170	2	66,555,	0,15962,
#Deleted in new
chr17	20981488	20981654	chr17:20981488-20981654	7	+	20981488	20981488	16724991	1	166,	0,
#Deleted in new
chr17	20983901	20984046	chr17:20983901-20984046	7	+	20983901	20983901	16724991	1	145,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	20999592	21043039	chr17:20999592-21043039	3	-	21003030	21042835	789624	13	3481,150,63,92,127,159,106,148,170,102,114,133,375,	0,4609,5335,7303,8277,11558,13237,16159,18349,19491,21520,28949,43072,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	20999596	21043760	chr17:20999596-21043760	1	-	21003030	21043760	789624	13	3477,150,63,92,127,159,106,148,170,102,114,133,135,	0,4605,5331,7299,8273,11554,13233,16155,18345,19487,21516,28945,44029,
#Deleted in new
chr17	20999746	21000323	chr17:20999746-21000323	3	+	20999746	20999746	8553170	2	291,213,	0,364,
#Partially deleted in new
chr17	21002374	21043375	chr17:21002374-21043375	0	-	21002374	21002374	8553170	4	468,21,133,55,	0,18831,26167,40946,
#Partially deleted in new
chr17	21002971	21043760	chr17:21002971-21043760	0	-	21021214	21043760	789624	13	102,150,63,92,127,159,106,148,170,102,114,133,440,	0,1230,1956,3924,4898,8179,9858,12780,14970,16112,18141,25570,40349,
#Deleted in new
chr17	21004219	21005150	chr17:21004219-21005150	0	-	21004219	21004219	8553170	2	132,223,	0,708,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	21006507	21011614	chr17:21006507-21011614	0	-	21006507	21006507	8553170	3	480,127,464,	0,1362,4643,
#Partially deleted in new
chr17	21011229	21019139	chr17:21011229-21019139	0	-	21011229	21019139	789624	3	80,170,56,	0,6712,7854,
#Partially deleted in new
chr17	21012829	21018341	chr17:21012829-21018341	0	-	21012829	21012829	8553170	4	106,148,170,140,	0,2922,5112,5372,
#Partially deleted in new
chr17	21015650	21021196	chr17:21015650-21021196	0	-	21015650	21015650	8553170	4	249,170,102,84,	0,2291,3433,5462,
#Partially deleted in new
chr17	21017941	21042273	chr17:21017941-21042273	0	-	21017941	21021215	789624	5	170,102,114,133,54,	0,1142,3171,10600,24278,
#Partially deleted in new
chr17	21017995	21043409	chr17:21017995-21043409	0	-	21017995	21021215	789624	5	116,102,114,133,89,	0,1088,3117,10546,25325,
#Partially deleted in new
chr17	21075555	21090615	chr17:21075555-21090615	3	+	21075555	21075555	789624	2	402,348,	0,14712,
#Partially deleted in new
chr17	21126651	21192030	chr17:21126651-21192030	3	+	21126971	21191153	789624	7	340,179,110,217,93,153,1083,	0,45366,51581,56942,57719,62059,64296,
#Partially deleted in new
chr17	21126946	21172416	chr17:21126946-21172416	0	+	21126946	21126946	8553170	2	45,399,	0,45071,
#Partially deleted in new
chr17	21126954	21191266	chr17:21126954-21191266	0	+	21126971	21183667	789624	6	37,179,217,93,153,319,	0,45063,56639,57416,61756,63993,
#Partially deleted in new
chr17	21126963	21191445	chr17:21126963-21191445	1	+	21172042	21191153	789624	7	233,175,110,217,93,153,498,	0,45058,51269,56630,57407,61747,63984,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	21126963	21128873	chr17:21126963-21128873	0	+	21126963	21126963	8553170	1	1910,	0,
#Partially deleted in new
chr17	21166153	21172443	chr17:21166153-21172443	0	+	21166153	21166153	8553170	2	318,426,	0,5864,
#Partially deleted in new
chr17	21171673	21191418	chr17:21171673-21191418	0	+	21171673	21171673	8553170	6	523,110,217,93,153,471,	0,6559,11920,12697,17037,19274,
#Partially deleted in new
chr17	21183733	21191445	chr17:21183733-21191445	0	+	21183733	21191153	789624	3	77,93,498,	0,637,7214,
#Partially deleted in new
chr17	21184384	21193265	chr17:21184384-21193265	1	+	21184384	21192860	789624	3	79,153,497,	0,4326,8384,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	21197279	21214624	chr17:21197279-21214624	3	-	21198323	21214152	789624	2	1561,534,	0,16811,
#Partially deleted in new
chr17	21197953	21213921	chr17:21197953-21213921	0	-	21197953	21197953	8553170	3	887,292,469,	0,12982,15499,
#Partially deleted in new
chr17	21197957	21214161	chr17:21197957-21214161	0	-	21197957	21197957	789624	3	883,292,71,	0,12978,16133,
#Partially deleted in new
chr17	21198255	21214163	chr17:21198255-21214163	0	-	21198255	21198255	8553170	3	585,161,73,	0,12811,15835,
#Partially deleted in new
chr17	21198539	21214176	chr17:21198539-21214176	0	-	21198539	21198539	8553170	4	301,148,292,86,	0,9852,12396,15551,
#Partially deleted in new
chr17	21198577	21213851	chr17:21198577-21213851	0	-	21198577	21198577	8553170	2	263,704,	0,14570,
#Partially deleted in new
chr17	21214330	21230035	chr17:21214330-21230035	3	+	21214330	21214330	8553170	3	120,104,263,	0,6034,15442,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	21214330	21219120	chr17:21214330-21219120	1	+	21214330	21214330	8553170	2	120,1032,	0,3758,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	21229333	21229628	chr17:21229333-21229628	3	-	21229333	21229333	8553170	1	295,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	21238869	21253410	chr17:21238869-21253410	3	-	21243312	21253264	789624	3	4560,119,252,	0,5236,14289,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	21259967	21260501	chr17:21259967-21260501	7	-	21259967	21259967	16724991	2	145,89,	0,445,
#Partially deleted in new
chr17	21284671	21315240	chr17:21284671-21315240	3	+	21284920	21314230	789624	12	298,67,49,114,120,117,52,128,78,140,46,1094,	0,13741,14206,15873,16202,17471,18511,19754,20379,27470,28820,29475,
#Partially deleted in new
chr17	21284671	21315213	chr17:21284671-21315213	0	+	21284920	21296177	789624	13	298,125,67,49,114,120,117,52,128,78,140,46,1067,	0,11414,13741,14206,15873,16202,17471,18511,19754,20379,27470,28820,29475,
#Partially deleted in new
chr17	21284709	21296143	chr17:21284709-21296143	0	+	21284920	21296143	789624	4	260,101,95,58,	0,3281,10965,11376,
#Partially deleted in new
chr17	21284709	21291717	chr17:21284709-21291717	0	+	21284709	21284709	8553170	2	260,281,	0,6727,
#Partially deleted in new
chr17	21284710	21300648	chr17:21284710-21300648	0	+	21284920	21295766	789624	5	259,95,67,49,104,	0,10964,13702,14167,15834,
#Partially deleted in new
chr17	21284710	21298444	chr17:21284710-21298444	0	+	21284920	21295766	789624	4	259,95,125,32,	0,10964,11375,13702,
#Partially deleted in new
chr17	21284710	21300917	chr17:21284710-21300917	0	+	21284710	21284710	8553170	5	259,67,49,188,44,	0,13702,14167,15760,16163,
#Partially deleted in new
chr17	21284710	21295766	chr17:21284710-21295766	1	+	21284920	21295766	789624	2	259,92,	0,10964,
#Partially deleted in new
chr17	21284821	21315228	chr17:21284821-21315228	0	+	21284920	21304431	789624	11	148,67,49,114,120,117,128,78,140,46,1082,	0,13591,14056,15723,16052,17321,19604,20229,27320,28670,29325,
#Partially deleted in new
chr17	21288035	21315213	chr17:21288035-21315213	1	+	21298450	21314230	789624	12	56,67,49,114,120,117,52,128,78,140,46,1067,	0,10377,10842,12509,12838,14107,15147,16390,17015,24106,25456,26111,
#Partially deleted in new
chr17	21288035	21303234	chr17:21288035-21303234	0	+	21298450	21303234	789624	7	56,67,49,114,120,117,52,	0,10377,10842,12509,12838,14107,15147,
#Partially deleted in new
chr17	21288045	21314310	chr17:21288045-21314310	1	+	21298450	21314230	789624	13	46,125,67,49,114,120,117,52,128,78,140,46,164,	0,8040,10367,10832,12499,12828,14097,15137,16380,17005,24096,25446,26101,
#Partially deleted in new
chr17	21291468	21314965	chr17:21291468-21314965	1	+	21298450	21314230	789624	14	79,95,125,67,49,114,120,117,52,128,78,140,46,819,	0,4206,4617,6944,7409,9076,9405,10674,11714,12957,13582,20673,22023,22678,
#Partially deleted in new
chr17	21311686	21314432	chr17:21311686-21314432	0	+	21311686	21311686	8553170	3	595,46,286,	0,1805,2460,
#Partially deleted in new
chr17	21312141	21313886	chr17:21312141-21313886	0	+	21312141	21313762	789624	2	140,395,	0,1350,
#Partially deleted in new
chr17	21376196	21419872	chr17:21376196-21419872	3	+	21415342	21416644	789624	3	717,122,4586,	0,32322,39090,
#Partially deleted in new
chr17	21405135	21417170	chr17:21405135-21417170	1	+	21415342	21416644	789624	3	192,122,1884,	0,3383,10151,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	21428380	21551669	chr17:21428380-21551669	0	-	21428380	21428380	8553170	7	2437,151,131,196,143,111,674,	0,3057,5289,11893,13595,107047,122615,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	21440097	21574265	chr17:21440097-21574265	0	-	21440097	21440097	8553170	7	375,143,115,89,111,510,26,	0,1878,11462,88924,95330,133128,134142,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	21444832	21445439	chr17:21444832-21445439	7	-	21444832	21444832	16724991	1	607,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	21456512	21460215	chr17:21456512-21460215	3	-	21456512	21456512	8553170	1	3703,	0,
#Deleted in new
chr17	21457433	21458989	chr17:21457433-21458989	3	+	21457433	21457433	8553170	2	267,137,	0,1419,
#Deleted in new
chr17	21504557	21505059	chr17:21504557-21505059	7	+	21504557	21504557	16724991	1	502,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	21510620	21574478	chr17:21510620-21574478	0	-	21510620	21510620	8553170	5	1977,119,111,510,239,	0,22771,24807,62605,63619,
#Partially deleted in new
chr17	21519513	21521269	chr17:21519513-21521269	3	+	21519513	21519513	8553170	2	191,205,	0,1551,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	21527363	21535292	chr17:21527363-21535292	0	-	21527363	21527363	8553170	3	176,89,272,	0,1658,7657,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	21528309	21551680	chr17:21528309-21551680	0	-	21528309	21528309	8553170	2	7229,685,	0,22686,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	21528317	21551678	chr17:21528317-21551678	3	-	21535299	21551422	789624	2	7221,683,	0,22678,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	21532476	21574303	chr17:21532476-21574303	0	-	21532476	21532476	8553170	4	2095,111,510,64,	0,2951,40749,41763,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	21532614	21574517	chr17:21532614-21574517	0	-	21532614	21532614	8553170	4	1407,111,510,278,	0,2813,40611,41625,
#Partially deleted in new
chr17	21532973	21542786	chr17:21532973-21542786	3	+	21532973	21532973	8553170	3	33,130,802,	0,8099,9011,
#Partially deleted in new
chr17	21535049	21574458	chr17:21535049-21574458	0	-	21535049	21535049	8553170	2	489,219,	0,39190,
#Deleted in new
chr17	21552508	21552711	chr17:21552508-21552711	7	+	21552508	21552508	16724991	1	203,	0,
#Deleted in new
chr17	21573535	21573746	chr17:21573535-21573746	7	-	21573535	21573535	16724991	1	211,	0,
#Deleted in new
chr17	21573769	21574073	chr17:21573769-21574073	7	+	21573769	21573769	16724991	1	304,	0,
#Deleted in new
chr17	21592793	21594180	chr17:21592793-21594180	7	+	21592793	21592793	16724991	1	1387,	0,
#Partially deleted in new
chr17	21614486	21641536	chr17:21614486-21641536	7	+	21614486	21614486	16724991	3	44,176,363,	0,18166,26687,
#Partially deleted in new
chr17	21632720	21641356	chr17:21632720-21641356	5	+	21632720	21632720	16724991	2	108,183,	0,8453,
#Deleted in new
chr17	21655842	21657633	chr17:21655842-21657633	7	-	21655842	21655842	16724991	2	76,462,	0,1329,
#Deleted in new
chr17	21678085	21678418	chr17:21678085-21678418	7	+	21678085	21678085	16724991	1	333,	0,
#Partially deleted in new
chr17	21692522	21704612	chr17:21692522-21704612	3	+	21702786	21704088	789624	3	192,122,1882,	0,3460,10208,
#Partially deleted in new
chr17	21773753	21783465	chr17:21773753-21783465	7	-	21773753	21773753	16724991	5	84,46,140,78,88,	0,690,1946,9049,9624,
#Deleted in new
chr17	22056586	22056755	chr17:22056586-22056755	7	-	22056586	22056586	16724991	1	169,	0,
#Partially deleted in new
chr17	22061960	22070538	chr17:22061960-22070538	7	-	22061960	22061960	16724991	2	190,104,	0,8474,
#Partially deleted in new
chr17	22202994	22205154	chr17:22202994-22205154	5	+	22202994	22202994	16724991	2	391,1068,	0,1092,
#Partially deleted in new
chr17	22204092	22205009	chr17:22204092-22205009	5	+	22204092	22204092	16724991	1	917,	0,
#Partially deleted in new
chr17	22221220	22221605	chr17:22221220-22221605	7	+	22221220	22221220	16724991	1	385,	0,
#Partially deleted in new
chr17	22234327	22266329	chr17:22234327-22266329	0	-	22234327	22234327	8553170	2	283,178,	0,31824,
#Partially deleted in new
chr17	22234329	22266362	chr17:22234329-22266362	3	-	22234329	22234329	8553170	8	284,171,240,175,151,105,144,211,	0,6662,6936,10229,10919,11496,20016,31822,
#Partially deleted in new
chr17	22245056	22266357	chr17:22245056-22266357	0	-	22245056	22245056	8553170	2	343,206,	0,21095,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	22266424	22287423	chr17:22266424-22287423	3	+	22266424	22266424	8553170	3	244,124,1146,	0,18580,19853,
#Deleted in new
chr17	22277866	22279289	chr17:22277866-22279289	7	-	22277866	22277866	16724991	1	1423,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	22285581	22288133	chr17:22285581-22288133	1	+	22285581	22285581	8553170	1	2552,	0,
#Deleted in new
chr17	22298690	22299893	chr17:22298690-22299893	3	+	22298690	22298690	789624	2	278,404,	0,799,
#Deleted in new
chr17	22299133	22299467	chr17:22299133-22299467	7	-	22299133	22299133	16724991	1	334,	0,
#Deleted in new
chr17	22299374	22299694	chr17:22299374-22299694	0	+	22299374	22299374	8553170	2	11,205,	0,115,
#Deleted in new
chr17	22301332	22301657	chr17:22301332-22301657	7	-	22301332	22301332	16724991	1	325,	0,
#Deleted in new
chr17	22305670	22306013	chr17:22305670-22306013	7	-	22305670	22305670	16724991	1	343,	0,
#Partially deleted in new
chr17	22331596	22332410	chr17:22331596-22332410	7	+	22331596	22331596	16724991	2	138,91,	0,723,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	22406018	22413744	chr17:22406018-22413744	3	+	22406018	22406018	5263520	2	151,3650,	0,4076,
#Deleted in new
chr17	22411892	22412229	chr17:22411892-22412229	7	-	22411892	22411892	16724991	1	337,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	22420021	22424731	chr17:22420021-22424731	3	+	22420021	22420021	8553170	1	4710,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	22435389	22439033	chr17:22435389-22439033	7	+	22435389	22435389	16724991	1	3644,	0,
#Deleted in new
chr17	22435627	22436061	chr17:22435627-22436061	5	+	22435627	22435627	16724991	1	434,	0,
#Deleted in new
chr17	22519194	22519504	chr17:22519194-22519504	7	-	22519194	22519194	16724991	1	310,	0,
#Deleted in new
chr17	22519616	22520709	chr17:22519616-22520709	7	+	22519616	22519616	16724991	1	1093,	0,
#Deleted in new
chr17	22523110	22524663	chr17:22523110-22524663	3	+	22524061	22524136	789624	1	1553,	0,
#Deleted in new
chr17	22524562	22525330	chr17:22524562-22525330	3	-	22524562	22524562	8553170	2	188,316,	0,452,
#Deleted in new
chr17	22524737	22525686	chr17:22524737-22525686	7	+	22524737	22524737	16724991	1	949,	0,
#Deleted in new
chr17	22525898	22526937	chr17:22525898-22526937	7	+	22525898	22525898	16724991	1	1039,	0,
#Deleted in new
chr17	22527323	22529570	chr17:22527323-22529570	7	+	22527323	22527323	16724991	1	2247,	0,
#Deleted in new
chr17	22528852	22528921	chr17:22528852-22528921	7	-	22528852	22528852	16724991	1	69,	0,
#Deleted in new
chr17	22529933	22530609	chr17:22529933-22530609	7	+	22529933	22529933	16724991	1	676,	0,
#Deleted in new
chr17	22530611	22531392	chr17:22530611-22531392	7	+	22530611	22530611	16724991	1	781,	0,
#Deleted in new
chr17	22531462	22531797	chr17:22531462-22531797	7	+	22531462	22531462	16724991	1	335,	0,
#Deleted in new
chr17	22531875	22532172	chr17:22531875-22532172	7	+	22531875	22531875	16724991	1	297,	0,
#Deleted in new
chr17	22532165	22532522	chr17:22532165-22532522	7	+	22532165	22532165	16724991	1	357,	0,
#Partially deleted in new
chr17	22567422	22568713	chr17:22567422-22568713	7	-	22567422	22567422	16724991	2	92,156,	0,1135,
#Deleted in new
chr17	22606387	22606703	chr17:22606387-22606703	7	+	22606387	22606387	16724991	1	316,	0,
#Partially deleted in new
chr17	22671432	22706607	chr17:22671432-22706607	6	+	22671432	22671432	16724991	2	210,1201,	0,33974,
#Partially deleted in new
chr17	22676694	22692618	chr17:22676694-22692618	3	-	22676694	22676694	8553170	2	100,154,	0,15770,
#Partially deleted in new
chr17	22692761	22706703	chr17:22692761-22706703	4	+	22692761	22692761	16724991	2	144,1297,	0,12645,
#Deleted in new
chr17	22692833	22693613	chr17:22692833-22693613	4	+	22692833	22692833	16724991	2	72,326,	0,454,
#Deleted in new
chr17	22693324	22694831	chr17:22693324-22694831	7	-	22693324	22693324	16724991	1	1507,	0,
#Deleted in new
chr17	22704414	22705685	chr17:22704414-22705685	5	+	22704414	22704414	16724991	1	1271,	0,
#Deleted in new
chr17	26981693	26982090	chr17:26981693-26982090	7	+	26981693	26981693	16724991	1	397,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	26989188	26999925	chr17:26989188-26999925	1	-	26989188	26989188	8553170	3	291,72,117,	0,2353,10620,
#Partially deleted in new
chr17	26998079	26999941	chr17:26998079-26999941	3	-	26998079	26998079	8553170	2	224,133,	0,1729,
#Deleted in new
chr17	27002660	27003259	chr17:27002660-27003259	7	-	27002660	27002660	16724991	1	599,	0,
#Partially deleted in new
chr17	27019526	27047934	chr17:27019526-27047934	7	-	27019526	27019526	16724991	5	81,178,99,145,38,	0,4948,5625,18464,28370,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	27057398	27058221	chr17:27057398-27058221	7	+	27057398	27057398	16724991	1	823,	0,
#Deleted in new
chr17	27082689	27084036	chr17:27082689-27084036	7	-	27082689	27082689	16724991	1	1347,	0,
#Partially deleted in new
chr17	27089544	27170310	chr17:27089544-27170310	3	+	27089544	27089544	8553170	4	340,49,172,596,	0,6820,79656,80170,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	27237858	27241661	chr17:27237858-27241661	3	-	27237858	27237858	8553170	2	565,49,	0,3754,
#Partially deleted in new
chr17	27274106	27274477	chr17:27274106-27274477	7	+	27274106	27274106	16724991	1	371,	0,
#Deleted in new
chr17	27280481	27280912	chr17:27280481-27280912	7	+	27280481	27280481	16724991	1	431,	0,
#Deleted in new
chr17	27281093	27281415	chr17:27281093-27281415	7	+	27281093	27281093	16724991	1	322,	0,
#Deleted in new
chr17	27293909	27293996	chr17:27293909-27293996	3	-	27293909	27293909	5263520	1	87,	0,
#Partially deleted in new
chr17	27294075	27304903	chr17:27294075-27304903	0	+	27294395	27304903	789624	4	360,190,269,124,	0,7691,9291,10704,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	27294079	27315926	chr17:27294079-27315926	3	+	27294395	27312369	789624	9	356,169,269,132,101,173,114,108,3717,	0,7708,9287,10700,12702,15020,15981,17429,18130,
#Partially deleted in new
chr17	27294086	27303422	chr17:27294086-27303422	0	+	27294395	27303422	789624	3	349,139,56,	0,7731,9280,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	27294092	27313631	chr17:27294092-27313631	0	+	27294092	27294092	789624	9	343,169,269,132,101,1529,114,108,1422,	0,7695,9274,10687,12689,13651,15968,17416,18117,
#Partially deleted in new
chr17	27294102	27308847	chr17:27294102-27308847	1	+	27294395	27307767	789624	4	333,132,101,1104,	0,10677,12679,13641,
#Partially deleted in new
chr17	27294111	27307870	chr17:27294111-27307870	1	+	27294395	27307767	789624	3	324,101,127,	0,12670,13632,
#Partially deleted in new
chr17	27294113	27307992	chr17:27294113-27307992	1	+	27294395	27307767	789624	6	322,76,269,132,101,249,	0,7767,9253,10666,12668,13630,
#Partially deleted in new
chr17	27294113	27307789	chr17:27294113-27307789	1	+	27294395	27306915	789624	5	322,169,269,132,1008,	0,7674,9253,10666,12668,
#Partially deleted in new
chr17	27294113	27301950	chr17:27294113-27301950	0	+	27294113	27294113	8553170	2	322,159,	0,7678,
#Partially deleted in new
chr17	27294113	27302009	chr17:27294113-27302009	0	+	27294113	27294113	8553170	2	322,222,	0,7674,
#Partially deleted in new
chr17	27294121	27303749	chr17:27294121-27303749	0	+	27294121	27294121	8553170	2	314,383,	0,9245,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	27294130	27312887	chr17:27294130-27312887	1	+	27294395	27312369	789624	7	305,132,101,173,114,108,678,	0,10649,12651,14969,15930,17378,18079,
#Partially deleted in new
chr17	27294188	27306858	chr17:27294188-27306858	0	+	27294395	27304795	789624	4	247,169,132,77,	0,7599,10591,12593,
#Partially deleted in new
chr17	27294345	27309255	chr17:27294345-27309255	0	+	27294395	27309255	789624	4	90,132,101,156,	0,10434,12436,14754,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	27302434	27308207	chr17:27302434-27308207	0	+	27302434	27302434	8553170	4	1201,132,101,464,	0,2345,4347,5309,
#Partially deleted in new
chr17	27303319	27310172	chr17:27303319-27310172	0	+	27303319	27303319	8553170	5	316,132,101,173,112,	0,1460,3462,5780,6741,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	27333255	27348491	chr17:27333255-27348491	3	+	27333255	27333255	8553170	3	172,135,147,	0,13672,15089,
#Deleted in new
chr17	27351857	27352584	chr17:27351857-27352584	7	-	27351857	27351857	16724991	1	727,	0,
#Partially deleted in new
chr17	27411437	27412806	chr17:27411437-27412806	7	-	27411437	27411437	16724991	3	30,23,101,	0,644,1268,
#Partially deleted in new
chr17	27417689	27430190	chr17:27417689-27430190	5	+	27417689	27417689	16724991	7	1574,73,84,151,110,66,455,	0,1851,2080,3301,4867,8269,12046,
#Partially deleted in new
chr17	27418004	27431623	chr17:27418004-27431623	7	+	27418004	27418004	16724991	13	91,155,73,84,151,621,110,49,95,66,100,669,819,	0,1104,1536,1765,2986,3623,4552,5936,7469,7954,8455,11731,12800,
#Partially deleted in new
chr17	27419537	27431301	chr17:27419537-27431301	5	+	27419537	27419537	16724991	12	70,43,126,108,110,49,121,85,90,84,398,261,	0,232,2050,2603,3019,4403,5001,5936,6922,7395,10198,11503,
#Partially deleted in new
chr17	27456469	27626435	chr17:27456469-27626435	3	+	27456643	27623392	789624	21	405,141,148,460,5,61,84,62,107,169,42,55,49,380,97,134,132,136,134,81,3122,	0,94098,121022,126176,129187,132005,134341,135891,136050,140798,144890,147364,148210,148964,151444,152726,153597,155024,160825,164723,166844,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	27456729	27483855	chr17:27456729-27483855	0	+	27456729	27456729	8553170	2	145,198,	0,26928,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	27465111	27465541	chr17:27465111-27465541	3	+	27465111	27465111	8553170	1	430,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	27472004	27583002	chr17:27472004-27583002	0	+	27577530	27583002	789624	6	76,177,141,142,148,357,	0,11653,78563,86041,105487,110641,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr17	27472009	27623392	chr17:27472009-27623392	1	+	27550567	27623392	789624	22	71,194,141,148,460,5,61,84,62,107,169,42,66,55,49,380,97,134,132,136,134,79,	0,11648,78558,105482,110636,113647,116465,118801,120351,120510,125258,129350,129883,131824,132670,133424,135904,137186,138057,139484,145285,151304,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr17	27472009	27626438	chr17:27472009-27626438	1	+	27577530	27621935	789624	22	71,194,141,148,460,5,61,84,62,107,169,42,66,55,49,380,97,134,132,136,134,4510,	0,11648,78558,105482,110636,113647,116465,118801,120351,120510,125258,129350,129883,131824,132670,133424,135904,137186,138057,139484,145285,149919,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr17	27472009	27617742	chr17:27472009-27617742	1	+	27577530	27617742	789624	22	71,194,141,148,460,5,61,84,62,107,169,42,66,55,49,380,97,134,132,136,134,4,	0,11648,78558,105482,110636,113647,116465,118801,120351,120510,125258,129350,129883,131824,132670,133424,135904,137186,138057,139484,145285,145729,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	27472012	27582935	chr17:27472012-27582935	0	+	27472012	27472012	8553170	4	68,194,141,290,	0,11645,78555,110633,
#Deleted in new
chr17	27526385	27527223	chr17:27526385-27527223	7	-	27526385	27526385	16724991	1	838,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	27560316	27579878	chr17:27560316-27579878	0	+	27560316	27560316	8553170	2	140,2387,	0,17175,
#Partially deleted in new
chr17	27566389	27626434	chr17:27566389-27626434	1	+	27566456	27623392	789624	19	184,148,460,5,61,84,62,107,169,55,49,380,97,134,132,136,134,81,3121,	0,11102,16256,19267,22085,24421,25971,26130,30878,37444,38290,39044,41524,42806,43677,45104,50905,54803,56924,
#Partially deleted in new
chr17	27577455	27585960	chr17:27577455-27585960	0	+	27577455	27577455	8553170	3	184,460,304,	0,5190,8201,
#Partially deleted in new
chr17	27582920	27622144	chr17:27582920-27622144	0	+	27582920	27621935	789624	17	185,5,61,84,62,107,169,42,55,49,380,97,134,132,136,134,216,	0,2736,5554,7890,9440,9599,14347,18439,20913,21759,22513,24993,26275,27146,28573,34374,39008,
#Partially deleted in new
chr17	27583008	27592614	chr17:27583008-27592614	0	+	27583008	27588387	789624	6	97,5,342,84,62,95,	0,2648,5185,7802,9352,9511,
#Partially deleted in new
chr17	27585847	27604728	chr17:27585847-27604728	0	+	27585847	27585847	8553170	8	150,61,84,62,107,169,55,49,	0,2627,4963,6513,6672,11420,17986,18832,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	27587111	27590855	chr17:27587111-27590855	0	+	27587111	27587111	8553170	3	563,61,45,	0,1363,3699,
#Partially deleted in new
chr17	27592557	27604728	chr17:27592557-27604728	0	+	27592557	27592557	8553170	5	69,169,42,55,49,	0,4710,8802,11276,12122,
#Partially deleted in new
chr17	27601289	27605645	chr17:27601289-27605645	0	+	27601289	27601289	8553170	4	112,55,49,212,	0,2544,3390,4144,
#Partially deleted in new
chr17	27609842	27623694	chr17:27609842-27623694	1	+	27610133	27621935	789624	4	356,136,134,1766,	0,1651,7452,12086,
#Partially deleted in new
chr17	27610127	27623455	chr17:27610127-27623455	0	+	27610127	27623392	789624	4	71,136,134,142,	0,1366,7167,13186,
#Partially deleted in new
chr17	27611308	27617428	chr17:27611308-27617428	0	+	27611308	27611308	8553170	3	69,136,134,	0,185,5986,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	27612587	27613251	chr17:27612587-27613251	7	-	27612587	27612587	16724991	1	664,	0,
#Deleted in new
chr17	27621034	27623822	chr17:27621034-27623822	0	+	27621034	27621034	8553170	2	239,509,	0,2279,
#Partially deleted in new
chr17	27623363	27640777	chr17:27623363-27640777	3	+	27623363	27623645	789624	3	305,92,206,	0,14899,17208,
#Partially deleted in new
chr17	27623445	27640661	chr17:27623445-27640661	0	+	27623445	27623645	789624	3	350,92,90,	0,14817,17126,
#Deleted in new
chr17	27625483	27626438	chr17:27625483-27626438	3	-	27625483	27625483	8553170	2	106,550,	0,405,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	27629797	27649560	chr17:27629797-27649560	1	+	27631265	27648982	0	10	1507,92,202,111,36,51,42,89,163,725,	0,8465,10774,12440,15516,16063,16749,17232,17472,19038,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	27629797	27649560	chr17:27629797-27649560	3	+	27631265	27648982	0	11	1507,92,202,111,96,36,51,42,89,163,725,	0,8465,10774,12440,13727,15516,16063,16749,17232,17472,19038,
#Partially deleted in new
chr17	27631147	27649433	chr17:27631147-27649433	1	+	27631265	27648914	0	9	157,92,202,111,36,51,42,89,598,	0,7115,9424,11090,14166,14713,15399,15882,17688,
#Partially deleted in new
chr17	27631166	27647334	chr17:27631166-27647334	0	+	27631265	27640739	789624	10	138,92,131,111,96,36,51,42,89,65,	0,7096,9476,11071,12358,14147,14694,15380,15863,16103,
#Partially deleted in new
chr17	27631187	27642423	chr17:27631187-27642423	0	+	27631187	27631187	8553170	4	117,92,202,186,	0,7075,9384,11050,
#Partially deleted in new
chr17	27631192	27647110	chr17:27631192-27647110	0	+	27631265	27647110	789624	5	112,92,202,111,81,	0,7070,9379,11045,15837,
#Partially deleted in new
chr17	27631194	27645899	chr17:27631194-27645899	0	+	27640710	27645899	789624	6	110,202,111,96,36,39,	0,9377,11043,12330,14119,14666,
#Partially deleted in new
chr17	27631208	27641023	chr17:27631208-27641023	0	+	27631208	27631208	8553170	4	96,92,202,59,	0,7054,9363,9756,
#Partially deleted in new
chr17	27631210	27638724	chr17:27631210-27638724	0	+	27631210	27631210	8553170	2	94,462,	0,7052,
#Partially deleted in new
chr17	27631213	27649541	chr17:27631213-27649541	0	+	27631265	27640739	789624	10	91,92,131,111,36,51,42,89,163,706,	0,7049,9429,11024,14100,14647,15333,15816,16056,17622,
#Partially deleted in new
chr17	27631225	27647164	chr17:27631225-27647164	0	+	27631225	27631225	8553170	7	79,92,202,111,51,42,135,	0,7037,9346,11012,14635,15321,15804,
#Partially deleted in new
chr17	27640386	27643581	chr17:27640386-27643581	0	+	27640386	27640386	8553170	3	387,111,57,	0,1851,3138,
#Partially deleted in new
chr17	27640733	27649256	chr17:27640733-27649256	0	+	27640733	27648914	789624	6	40,111,51,42,89,421,	0,1504,5127,5813,6296,8102,
#Partially deleted in new
chr17	27643539	27647383	chr17:27643539-27647383	0	+	27643539	27647383	789624	5	81,51,42,89,114,	0,2321,3007,3490,3730,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	27644064	27649554	chr17:27644064-27649554	0	+	27644064	27644064	8553170	6	1285,51,42,89,163,719,	0,1796,2482,2965,3205,4771,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	27644125	27649555	chr17:27644125-27649555	0	+	27644125	27644125	8553170	4	1786,42,403,720,	0,2421,2904,4710,
#Partially deleted in new
chr17	27651333	27665712	chr17:27651333-27665712	7	-	27651333	27651333	16724991	14	46,94,183,76,116,87,199,162,182,79,99,174,50,100,	0,586,2216,3364,3964,4493,6182,7372,9213,10501,11464,12708,13270,14279,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	27661548	27663658	chr17:27661548-27663658	4	-	27661548	27661548	16724991	1	2110,	0,
#Deleted in new
chr17	27666748	27672803	chr17:27666748-27672803	7	-	27666748	27666748	16724991	9	167,151,100,110,108,81,40,83,102,	0,893,1417,2905,3343,3891,4456,5771,5953,
#Deleted in new
chr17	27675893	27675997	chr17:27675893-27675997	7	-	27675893	27675893	16724991	1	104,	0,
#Deleted in new
chr17	27677804	27678087	chr17:27677804-27678087	7	-	27677804	27677804	16724991	1	283,	0,
#Deleted in new
chr17	27682475	27682737	chr17:27682475-27682737	7	+	27682475	27682475	16724991	1	262,	0,
#Deleted in new
chr17	27683945	27684144	chr17:27683945-27684144	7	-	27683945	27683945	16724991	1	199,	0,
#Deleted in new
chr17	27707177	27707250	chr17:27707177-27707250	7	+	27707177	27707177	16724991	1	73,	0,
#Deleted in new
chr17	27708110	27708138	chr17:27708110-27708138	7	+	27708110	27708110	16724991	1	28,	0,
#Partially deleted in new
chr17	27746131	27754954	chr17:27746131-27754954	7	+	27746131	27746131	16724991	8	92,225,111,36,51,42,89,118,	0,1972,3652,6717,7270,7954,8464,8705,
#Partially deleted in new
chr17	27756765	27800499	chr17:27756765-27800499	3	-	27757245	27798809	0	27	588,195,149,122,88,208,164,182,79,133,175,50,105,145,83,195,102,175,140,142,92,163,149,123,85,183,161,	0,2115,3264,3857,4378,6032,7215,8769,9744,10939,12211,12769,14147,15542,16395,17491,21924,22116,24001,24270,25249,26178,30912,32043,32838,41934,43573,
#Partially deleted in new
chr17	27756795	27793780	chr17:27756795-27793780	1	-	27757245	27793694	789624	26	558,195,149,122,88,208,164,182,79,133,175,50,105,145,83,195,102,175,140,142,92,163,149,123,85,193,	0,2085,3234,3827,4348,6002,7185,8739,9714,10909,12181,12739,14117,15512,16365,17461,21894,22086,23971,24240,25219,26148,30882,32013,32808,36792,
#Partially deleted in new
chr17	27757245	27798809	chr17:27757245-27798809	1	-	27757245	27798809	0	27	108,195,149,122,88,208,164,182,79,133,175,50,105,145,83,195,102,175,69,29,67,92,163,149,123,85,110,	0,1635,2784,3377,3898,5552,6735,8289,9264,10459,11731,12289,13667,15062,15915,17011,21444,21636,23521,23632,23865,24769,25698,30432,31563,32358,41454,
#Partially deleted in new
chr17	27798805	27893365	chr17:27798805-27893365	3	-	27798840	27882694	789624	5	77,219,93,144,49,	0,5317,81468,83763,94511,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	27874644	27881237	chr17:27874644-27881237	3	+	27874644	27874644	8553170	2	135,2131,	0,4462,
#Partially deleted in new
chr17	27878313	27892321	chr17:27878313-27892321	1	-	27879472	27882694	789624	5	1177,93,144,192,79,	0,1960,4255,4625,13929,
#Partially deleted in new
chr17	27878357	27893359	chr17:27878357-27893359	1	-	27880231	27882694	789624	3	2009,144,43,	0,4211,14959,
#Partially deleted in new
chr17	27879050	27893383	chr17:27879050-27893383	1	-	27880123	27882694	789624	5	440,63,93,144,67,	0,1070,1223,3518,14266,
#Partially deleted in new
chr17	27879293	27893383	chr17:27879293-27893383	3	-	27879472	27882694	789624	4	197,93,144,67,	0,980,3275,14023,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	27880190	27892511	chr17:27880190-27892511	1	-	27880231	27882694	789624	3	176,144,112,	0,2378,12209,
#Deleted in new
chr17	27882611	27883297	chr17:27882611-27883297	0	-	27882611	27882694	789624	2	101,359,	0,327,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	27891928	27894752	chr17:27891928-27894752	0	-	27891928	27891928	8553170	1	2824,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	27929547	27974223	chr17:27929547-27974223	3	-	27929547	27929547	8553170	4	928,119,157,136,	0,1059,1989,44540,
#Deleted in new
chr17	28018769	28018907	chr17:28018769-28018907	3	+	28018769	28018769	8553170	1	138,	0,
#Partially deleted in new
chr17	28021667	28022265	chr17:28021667-28022265	7	-	28021667	28021667	16724991	2	113,178,	0,420,
#Deleted in new
chr17	28022329	28022464	chr17:28022329-28022464	3	-	28022329	28022329	8553170	1	135,	0,
#Partially deleted in new
chr17	28041736	28048324	chr17:28041736-28048324	0	+	28041736	28041736	8553170	3	43,244,408,	0,1351,6180,
#Partially deleted in new
chr17	28042155	28196381	chr17:28042155-28196381	3	+	28042873	28194636	789624	11	1176,130,56,107,86,210,102,87,199,94,1800,	0,80447,90464,119004,121387,126292,130361,143023,148865,149964,152426,
#Partially deleted in new
chr17	28042838	28048926	chr17:28042838-28048926	1	+	28042873	28048004	789624	2	493,1010,	0,5078,
#Partially deleted in new
chr17	28043029	28196381	chr17:28043029-28196381	0	+	28043029	28194636	789624	12	302,130,56,107,86,210,102,87,199,94,127,202,	0,79573,89590,118130,120513,125418,129487,142149,147991,149090,151552,153150,
#Partially deleted in new
chr17	28061966	28062068	chr17:28061966-28062068	3	+	28061966	28061966	8553170	1	102,	0,
#Deleted in new
chr17	28116238	28116406	chr17:28116238-28116406	7	-	28116238	28116238	16724991	1	168,	0,
#Partially deleted in new
chr17	28171232	28191172	chr17:28171232-28191172	0	+	28171232	28171232	8553170	4	110,102,87,152,	0,1284,13946,19788,
#Partially deleted in new
chr17	28190940	28194985	chr17:28190940-28194985	0	+	28190940	28190940	8553170	3	279,94,404,	0,1179,3641,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	28219284	28220005	chr17:28219284-28220005	3	+	28219284	28219284	8553170	1	721,	0,
#Deleted in new
chr17	28226562	28228065	chr17:28226562-28228065	7	+	28226562	28226562	16724991	2	316,760,	0,743,
#Deleted in new
chr17	28227305	28227701	chr17:28227305-28227701	5	+	28227305	28227305	16724991	2	188,94,	0,302,
#Deleted in new
chr17	28246453	28248006	chr17:28246453-28248006	3	-	28246453	28246453	8553170	1	1553,	0,
#Deleted in new
chr17	28247443	28248289	chr17:28247443-28248289	5	+	28247443	28247443	16724991	2	191,511,	0,335,
#Deleted in new
chr17	28247443	28248289	chr17:28247443-28248289	7	+	28247443	28247443	16724991	2	507,150,	0,696,
#Deleted in new
chr17	28256374	28256669	chr17:28256374-28256669	7	-	28256374	28256374	16724991	1	295,	0,
#Partially deleted in new
chr17	28256437	28265551	chr17:28256437-28265551	3	+	28256437	28256437	8553170	2	86,690,	0,8424,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	28263633	28266369	chr17:28263633-28266369	3	-	28263633	28263633	8553170	1	2736,	0,
#Deleted in new
chr17	28269202	28272365	chr17:28269202-28272365	7	-	28269202	28269202	16724991	3	503,790,148,	0,1707,3015,
#Deleted in new
chr17	28274656	28275716	chr17:28274656-28275716	7	-	28274656	28274656	16724991	2	133,111,	0,949,
#Partially deleted in new
chr17	28275985	28307382	chr17:28275985-28307382	5	-	28275985	28275985	16724991	3	1426,117,407,	0,30108,30990,
#Partially deleted in new
chr17	28276044	28317783	chr17:28276044-28317783	7	-	28276044	28276044	16724991	4	1293,50,117,86,	0,20567,30049,41653,
#Partially deleted in new
chr17	28277217	28307382	chr17:28277217-28307382	4	-	28277217	28277217	16724991	3	194,117,351,	0,28876,29814,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	28319094	28328685	chr17:28319094-28328685	3	+	28319239	28326793	789624	3	271,145,2152,	0,6408,7439,
#Partially deleted in new
chr17	28319201	28326875	chr17:28319201-28326875	1	+	28326583	28326793	789624	4	58,33,145,342,	0,131,6301,7332,
#Partially deleted in new
chr17	28319205	28325835	chr17:28319205-28325835	1	+	28319239	28325655	789624	2	160,333,	0,6297,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	28319268	28327511	chr17:28319268-28327511	0	+	28319268	28326793	789624	2	97,978,	0,7265,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	28319454	28328225	chr17:28319454-28328225	1	+	28326583	28326793	789624	4	243,35,145,1692,	0,5235,6048,7079,
#Partially deleted in new
chr17	28328324	28335489	chr17:28328324-28335489	1	-	28328721	28331985	789624	4	409,86,129,150,	0,2118,3534,7015,
#Partially deleted in new
chr17	28328325	28335439	chr17:28328325-28335439	1	-	28328629	28331985	789624	6	332,104,86,129,36,100,	0,847,2117,3533,3820,7014,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	28328325	28329810	chr17:28328325-28329810	0	-	28328325	28328325	8553170	1	1485,	0,
#Partially deleted in new
chr17	28328326	28331976	chr17:28328326-28331976	0	-	28328721	28331976	789624	3	407,86,118,	0,2116,3532,
#Partially deleted in new
chr17	28328328	28335440	chr17:28328328-28335440	3	-	28328651	28331985	789624	5	405,104,86,129,101,	0,844,2114,3530,7011,
#Partially deleted in new
chr17	28328328	28335449	chr17:28328328-28335449	1	-	28328651	28332221	789624	6	405,104,86,129,237,110,	0,844,2114,3530,3817,7011,
#Partially deleted in new
chr17	28328336	28335439	chr17:28328336-28335439	1	-	28328651	28331985	789624	6	397,104,86,129,36,100,	0,836,2106,3522,3809,7003,
#Partially deleted in new
chr17	28328886	28335435	chr17:28328886-28335435	1	-	28329037	28332221	789624	6	182,104,86,129,237,96,	0,286,1556,2972,3259,6453,
#Partially deleted in new
chr17	28328998	28335440	chr17:28328998-28335440	1	-	28329168	28332221	789624	5	278,86,129,237,101,	0,1444,2860,3147,6341,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	28329684	28335470	chr17:28329684-28335470	0	-	28329684	28329684	8553170	3	844,129,131,	0,2174,5655,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	28330190	28335455	chr17:28330190-28335455	0	-	28330190	28330190	8553170	4	338,129,237,116,	0,1668,1955,5149,
#Partially deleted in new
chr17	28330476	28335444	chr17:28330476-28335444	0	-	28330476	28332221	789624	5	52,129,237,34,105,	0,1382,1669,2213,4863,
#Partially deleted in new
chr17	28331385	28335489	chr17:28331385-28335489	0	-	28331385	28331385	8553170	2	602,150,	0,3954,
#Partially deleted in new
chr17	28331401	28335478	chr17:28331401-28335478	0	-	28331401	28331401	8553170	3	586,237,139,	0,744,3938,
#Partially deleted in new
chr17	28331602	28335472	chr17:28331602-28335472	0	-	28331602	28331602	8553170	3	385,36,133,	0,543,3737,
#Partially deleted in new
chr17	28335601	28345255	chr17:28335601-28345255	1	+	28340415	28344600	789624	6	255,170,90,53,196,892,	0,4707,5635,5802,6645,8762,
#Partially deleted in new
chr17	28335652	28340425	chr17:28335652-28340425	0	+	28339521	28340425	789624	3	100,319,117,	0,3755,4656,
#Partially deleted in new
chr17	28335703	28347009	chr17:28335703-28347009	3	+	28339521	28344600	789624	7	153,319,170,90,53,196,2646,	0,3704,4605,5533,5700,6543,8660,
#Partially deleted in new
chr17	28335760	28344510	chr17:28335760-28344510	0	+	28335760	28335760	8553170	5	96,90,53,196,147,	0,5476,5643,6486,8603,
#Partially deleted in new
chr17	28336466	28340478	chr17:28336466-28340478	0	+	28339521	28340478	789624	3	90,319,170,	0,2941,3842,
#Partially deleted in new
chr17	28340405	28342512	chr17:28340405-28342512	0	+	28340415	28342512	789624	4	73,90,53,266,	0,831,998,1841,
#Partially deleted in new
chr17	28347176	28357522	chr17:28347176-28357522	3	-	28348116	28357448	789624	11	1055,80,126,27,137,108,76,97,98,82,235,	0,1906,3261,3589,4487,5735,6064,6518,7311,8618,10111,
#Partially deleted in new
chr17	28347660	28357463	chr17:28347660-28357463	1	-	28348116	28357448	789624	11	571,80,126,27,137,108,76,97,44,82,176,	0,1422,2777,3105,4003,5251,5580,6034,6827,8134,9627,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	28357580	28363683	chr17:28357580-28363683	3	+	28357670	28361252	789624	6	301,74,90,43,113,2527,	0,1335,1734,2948,3154,3576,
#Partially deleted in new
chr17	28357646	28361229	chr17:28357646-28361229	0	+	28357670	28359349	789624	5	259,90,43,113,73,	0,1668,2882,3088,3510,
#Partially deleted in new
chr17	28357646	28381697	chr17:28357646-28381697	3	+	28357646	28357646	8553170	6	235,74,90,43,113,495,	0,1269,1668,2882,3088,23556,
#Deleted in new
chr17	28357651	28358468	chr17:28357651-28358468	0	+	28357651	28357651	8553170	2	230,155,	0,662,
#Deleted in new
chr17	28357656	28359611	chr17:28357656-28359611	0	+	28357656	28357656	8553170	4	225,74,90,92,	0,1259,1658,1863,
#Partially deleted in new
chr17	28357707	28361234	chr17:28357707-28361234	0	+	28357707	28357707	8553170	5	174,74,90,319,78,	0,1208,1607,2821,3449,
#Partially deleted in new
chr17	28358042	28361455	chr17:28358042-28361455	1	+	28360838	28361252	789624	5	426,90,43,113,299,	0,1272,2486,2692,3114,
#Partially deleted in new
chr17	28359186	28361108	chr17:28359186-28361108	0	+	28359186	28359186	8553170	3	218,43,374,	0,1342,1548,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	28360237	28361295	chr17:28360237-28361295	0	+	28360237	28360237	8553170	3	334,113,139,	0,497,919,
#Deleted in new
chr17	28360653	28360734	chr17:28360653-28360734	3	+	28360653	28360653	5263520	1	81,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	28361600	28362859	chr17:28361600-28362859	3	-	28361600	28361600	8553170	2	825,296,	0,963,
#Deleted in new
chr17	28364267	28365244	chr17:28364267-28365244	3	-	28364267	28365151	789624	3	381,161,124,	0,527,853,
#Partially deleted in new
chr17	28364287	28368012	chr17:28364287-28368012	3	-	28364837	28368012	789624	4	361,161,31,298,	0,507,3163,3427,
#Partially deleted in new
chr17	28364355	28398135	chr17:28364355-28398135	0	+	28364355	28364355	8553170	11	120,50,619,213,92,236,103,180,122,104,82,	0,760,16847,20001,20483,20684,23818,24004,31549,31801,33698,
#Deleted in new
chr17	28367275	28370822	chr17:28367275-28370822	3	-	28367368	28370203	0	8	206,345,153,157,140,345,120,683,	0,439,1245,1596,2013,2231,2651,2864,
#Deleted in new
chr17	28367867	28368937	chr17:28367867-28368937	0	-	28367867	28367867	8553170	2	192,417,	0,653,
#Deleted in new
chr17	28369681	28373091	chr17:28369681-28373091	0	-	28369681	28370203	789624	4	170,120,131,80,	0,245,458,3330,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	28371661	28404049	chr17:28371661-28404049	3	+	28372032	28396286	789624	9	841,619,213,92,236,103,190,122,7893,	0,9541,12695,13177,13378,16512,16688,24243,24495,
#Deleted in new
chr17	28373255	28373562	chr17:28373255-28373562	3	+	28373255	28373255	8553170	1	307,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	28373672	28374301	chr17:28373672-28374301	3	-	28373672	28373672	8553170	1	629,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	28384669	28398163	chr17:28384669-28398163	0	+	28384669	28384669	8553170	6	261,236,103,190,122,2007,	0,370,3504,3680,11235,11487,
#Partially deleted in new
chr17	28384825	28388394	chr17:28384825-28388394	0	+	28384825	28386621	789624	5	105,236,74,103,45,	0,214,1782,3348,3524,
#Partially deleted in new
chr17	28385099	28396411	chr17:28385099-28396411	0	+	28385099	28396286	789624	5	176,154,190,122,255,	0,3023,3250,10805,11057,
#Partially deleted in new
chr17	28385430	28396198	chr17:28385430-28396198	0	+	28385430	28385430	8553170	4	36,366,122,42,	0,2743,10474,10726,
#Partially deleted in new
chr17	28387997	28395978	chr17:28387997-28395978	0	+	28387997	28387997	8553170	3	279,180,74,	0,362,7907,
#Partially deleted in new
chr17	28388269	28396820	chr17:28388269-28396820	0	+	28388269	28396030	789624	3	7,190,916,	0,80,7635,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	28394755	28406210	chr17:28394755-28406210	3	-	28399655	28406114	789624	5	4958,157,84,853,324,	0,5854,7482,9860,11131,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	28395675	28406201	chr17:28395675-28406201	1	-	28399655	28406114	789624	4	4038,157,853,315,	0,4934,8940,10211,
#Partially deleted in new
chr17	28399345	28404821	chr17:28399345-28404821	0	-	28399546	28404821	789624	2	368,206,	0,5270,
#Deleted in new
chr17	28400517	28401045	chr17:28400517-28401045	0	-	28400517	28400517	8553170	1	528,	0,
#Deleted in new
chr17	28404239	28405747	chr17:28404239-28405747	0	-	28404239	28404239	8553170	2	529,67,	0,1441,
#Deleted in new
chr17	28404315	28406168	chr17:28404315-28406168	0	-	28404315	28404315	8553170	2	1153,282,	0,1571,
#Deleted in new
chr17	28404723	28406630	chr17:28404723-28406630	0	-	28404723	28405892	789624	3	745,111,174,	0,1163,1733,
#Deleted in new
chr17	28405047	28406599	chr17:28405047-28406599	0	-	28405047	28405432	789624	2	421,143,	0,1409,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	28405239	28406796	chr17:28405239-28406796	3	+	28405239	28405239	8553170	2	212,281,	0,1276,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	28405376	28407197	chr17:28405376-28407197	0	-	28405376	28405892	789624	4	92,111,167,474,	0,510,1080,1347,
#Partially deleted in new
chr17	28416921	28417492	chr17:28416921-28417492	7	+	28416921	28416921	16724991	2	241,116,	0,455,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	28444062	28445563	chr17:28444062-28445563	7	-	28444062	28444062	16724991	3	117,165,228,	0,453,1273,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	28455751	28614183	chr17:28455751-28614183	0	-	28612045	28614161	8553170	8	358,1165,28,41,69,84,249,97,	0,148299,156016,156292,157326,157510,157688,158335,
#Partially deleted in new
chr17	28467821	28468406	chr17:28467821-28468406	7	+	28467821	28467821	16724991	1	585,	0,
#Partially deleted in new
chr17	28473292	28497781	chr17:28473292-28497781	3	+	28473712	28497269	789624	12	522,129,137,206,181,123,219,89,122,162,138,683,	0,15921,17161,17408,18144,18437,20278,20724,21098,22362,23157,23806,
#Partially deleted in new
chr17	28473292	28497778	chr17:28473292-28497778	1	+	28473712	28497269	789624	12	522,129,284,206,181,123,219,89,122,162,138,680,	0,15921,17014,17408,18144,18437,20278,20724,21098,22362,23157,23806,
#Partially deleted in new
chr17	28473645	28493903	chr17:28473645-28493903	1	+	28489243	28493903	789624	8	169,129,137,206,181,123,175,156,	0,15568,16808,17055,17791,18084,19925,20102,
#Partially deleted in new
chr17	28473691	28497318	chr17:28473691-28497318	0	+	28473712	28487415	789624	12	123,141,129,137,206,181,123,535,122,162,138,220,	0,13718,15522,16762,17009,17745,18038,19879,20699,21963,22758,23407,
#Partially deleted in new
chr17	28473737	28497778	chr17:28473737-28497778	0	+	28473737	28487415	789624	14	77,141,129,62,137,206,181,123,219,89,122,162,138,680,	0,13672,15476,16569,16716,16963,17699,17992,19833,20279,20653,21917,22712,23361,
#Partially deleted in new
chr17	28473737	28494076	chr17:28473737-28494076	0	+	28473737	28473737	8553170	6	77,137,206,181,123,506,	0,16716,16963,17699,17992,19833,
#Partially deleted in new
chr17	28473737	28497694	chr17:28473737-28497694	0	+	28473737	28487415	789624	13	77,141,129,137,206,181,123,219,89,122,162,138,596,	0,13672,15476,16716,16963,17699,17992,19833,20279,20653,21917,22712,23361,
#Partially deleted in new
chr17	28506242	28524731	chr17:28506242-28524731	0	+	28523969	28524731	789624	3	201,132,229,	0,17718,18260,
#Partially deleted in new
chr17	28506259	28537436	chr17:28506259-28537436	3	+	28523969	28537436	0	9	184,137,465,111,131,97,208,492,320,	0,17696,18243,20991,22834,24489,28071,28447,30857,
#Partially deleted in new
chr17	28523940	28538896	chr17:28523940-28538896	1	+	28523969	28537436	0	8	152,465,111,131,97,208,492,1780,	0,562,3310,5153,6808,10390,10766,13176,
#Partially deleted in new
chr17	28546706	28552668	chr17:28546706-28552668	3	-	28547296	28552557	0	5	703,173,103,114,331,	0,970,1292,1885,5631,
#Partially deleted in new
chr17	28546707	28552631	chr17:28546707-28552631	1	-	28547623	28552557	0	4	1142,103,114,294,	0,1291,1884,5630,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	28546707	28551802	chr17:28546707-28551802	1	-	28547296	28548640	789624	4	702,173,103,3211,	0,969,1291,1884,
#Deleted in new
chr17	28546710	28549399	chr17:28546710-28549399	1	-	28547623	28548640	789624	3	1139,103,808,	0,1288,1881,
#Partially deleted in new
chr17	28547523	28552549	chr17:28547523-28552549	0	-	28547802	28552549	789624	2	326,212,	0,4814,
#Partially deleted in new
chr17	28547641	28552609	chr17:28547641-28552609	0	-	28547641	28552557	789624	5	208,103,65,28,272,	0,357,950,4423,4696,
#Deleted in new
chr17	28547687	28548173	chr17:28547687-28548173	0	-	28547687	28547687	8553170	2	162,175,	0,311,
#Deleted in new
chr17	28551824	28552625	chr17:28551824-28552625	0	-	28551824	28551824	8553170	2	268,288,	0,513,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	28553382	28571528	chr17:28553382-28571528	0	-	28570871	28571496	789624	11	1113,211,101,146,115,143,208,92,90,112,66,	0,1468,2783,3444,5093,6666,8039,10048,10435,17469,18080,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	28553386	28571872	chr17:28553386-28571872	3	-	28554219	28571496	789624	12	1109,211,101,146,115,143,208,92,90,112,140,410,	0,1464,2779,3440,5089,6662,8035,10044,10431,17465,17662,18076,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	28553386	28571536	chr17:28553386-28571536	1	-	28554219	28571198	789624	11	1109,211,101,146,115,143,208,92,90,112,488,	0,1464,2779,3440,5089,6662,8035,10044,10431,17465,17662,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	28553386	28556829	chr17:28553386-28556829	0	-	28553386	28553386	8553170	2	1109,1979,	0,1464,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	28553386	28557503	chr17:28553386-28557503	0	-	28553386	28553386	8553170	3	1109,211,1338,	0,1464,2779,
#Partially deleted in new
chr17	28556468	28560348	chr17:28556468-28560348	0	-	28556468	28556468	8553170	3	504,115,300,	0,2007,3580,
#Partially deleted in new
chr17	28556961	28563652	chr17:28556961-28563652	0	-	28556961	28556961	8553170	5	11,115,143,208,222,	0,1514,3087,4460,6469,
#Partially deleted in new
chr17	28558501	28563659	chr17:28558501-28563659	0	-	28558501	28558501	8553170	5	89,143,208,92,46,	0,1547,2920,4929,5112,
#Partially deleted in new
chr17	28558501	28561797	chr17:28558501-28561797	0	-	28558501	28558501	8553170	3	89,143,376,	0,1547,2920,
#Partially deleted in new
chr17	28558501	28563661	chr17:28558501-28563661	0	-	28558501	28558501	8553170	4	89,143,92,48,	0,1547,4929,5112,
#Partially deleted in new
chr17	28558521	28571540	chr17:28558521-28571540	0	-	28570871	28571496	789624	6	69,143,92,90,112,78,	0,1527,4909,5296,12330,12941,
#Partially deleted in new
chr17	28563431	28571538	chr17:28563431-28571538	0	-	28570871	28571496	789624	4	91,90,337,76,	0,386,7420,8031,
#Partially deleted in new
chr17	28563726	28571510	chr17:28563726-28571510	0	-	28563726	28563726	8553170	4	181,112,140,48,	0,7125,7322,7736,
#Partially deleted in new
chr17	28563817	28571504	chr17:28563817-28571504	0	-	28563817	28563817	8553170	2	90,456,	0,7231,
#Partially deleted in new
chr17	28563827	28571794	chr17:28563827-28571794	0	-	28563827	28563827	8553170	4	80,112,140,245,	0,7024,7221,7722,
#Deleted in new
chr17	28573114	28577264	chr17:28573114-28577264	3	-	28573525	28575532	0	9	507,200,175,84,161,55,212,124,464,	0,620,952,1379,1581,1837,2008,2306,3686,
#Deleted in new
chr17	28573114	28576885	chr17:28573114-28576885	1	-	28573525	28575532	789624	8	507,200,175,161,55,212,124,85,	0,620,952,1581,1837,2008,2306,3686,
#Deleted in new
chr17	28573114	28576948	chr17:28573114-28576948	1	-	28573525	28575532	0	10	507,200,175,84,161,55,212,124,56,148,	0,620,952,1379,1581,1837,2008,2306,2850,3686,
#Deleted in new
chr17	28573116	28574243	chr17:28573116-28574243	3	+	28573116	28573116	8553170	2	251,47,	0,1080,
#Deleted in new
chr17	28574695	28575914	chr17:28574695-28575914	0	-	28574695	28575532	789624	4	161,55,212,494,	0,256,427,725,
#Deleted in new
chr17	28574709	28576895	chr17:28574709-28576895	0	-	28574709	28575532	789624	6	147,55,212,124,53,95,	0,242,413,711,1255,2091,
#Deleted in new
chr17	28574713	28576894	chr17:28574713-28576894	0	-	28574713	28575329	789624	5	143,55,212,76,94,	0,238,409,707,2087,
#Deleted in new
chr17	28574787	28576398	chr17:28574787-28576398	0	-	28574787	28575532	789624	5	69,55,212,124,119,	0,164,335,633,1492,
#Deleted in new
chr17	28574963	28576424	chr17:28574963-28576424	0	-	28574963	28575532	789624	4	43,212,124,460,	0,159,457,1001,
#Deleted in new
chr17	28574978	28576891	chr17:28574978-28576891	0	-	28574978	28574978	8553170	3	356,124,91,	0,442,1822,
#Deleted in new
chr17	28577564	28578430	chr17:28577564-28578430	0	-	28577564	28577564	8553170	3	206,283,58,	0,445,808,
#Deleted in new
chr17	28577569	28578735	chr17:28577569-28578735	0	-	28577569	28577569	8553170	4	201,81,311,64,	0,440,648,1102,
#Partially deleted in new
chr17	28577573	28599279	chr17:28577573-28599279	3	-	28577698	28598946	789624	24	197,81,75,156,81,112,121,87,112,139,134,103,148,94,114,93,120,135,93,75,175,1085,126,384,	0,436,644,799,1098,1567,1791,2177,2435,5937,6279,6576,6759,7078,7528,7745,7960,8290,8516,8851,14124,14408,20936,21322,
#Deleted in new
chr17	28577579	28579406	chr17:28577579-28579406	0	-	28577742	28579406	789624	7	172,81,75,156,81,112,42,	0,430,638,793,1092,1561,1785,
#Deleted in new
chr17	28577602	28579252	chr17:28577602-28579252	0	-	28577602	28577602	8553170	3	168,743,112,	0,407,1538,
#Deleted in new
chr17	28578376	28580086	chr17:28578376-28580086	0	-	28578376	28578376	8553170	5	152,81,345,87,78,	0,295,764,1374,1632,
#Deleted in new
chr17	28579159	28580171	chr17:28579159-28580171	0	-	28579159	28579159	8553170	3	93,121,421,	0,205,591,
#Partially deleted in new
chr17	28579208	28583626	chr17:28579208-28583626	0	-	28579208	28579208	8553170	4	44,121,370,116,	0,156,542,4302,
#Deleted in new
chr17	28579399	28580772	chr17:28579399-28580772	0	-	28579399	28579399	8553170	3	86,87,764,	0,351,609,
#Partially deleted in new
chr17	28579753	28584662	chr17:28579753-28584662	0	-	28580120	28584662	789624	7	84,136,139,134,103,148,11,	0,255,3757,4099,4396,4579,4898,
#Partially deleted in new
chr17	28579815	28583618	chr17:28579815-28583618	0	-	28582753	28583618	789624	4	22,112,93,108,	0,193,2911,3695,
#Partially deleted in new
chr17	28580008	28585998	chr17:28580008-28585998	0	-	28584432	28585998	789624	8	112,139,134,103,148,114,93,135,	0,3502,3844,4141,4324,5093,5310,5855,
#Partially deleted in new
chr17	28580011	28614185	chr17:28580011-28614185	0	-	28580011	28614161	789624	8	109,139,134,103,116,84,249,99,	0,3499,3841,4138,33019,33250,33428,34075,
#Partially deleted in new
chr17	28584425	28591753	chr17:28584425-28591753	0	-	28584425	28591753	789624	8	55,94,114,93,135,93,75,56,	0,226,676,893,1438,1664,1999,7272,
#Partially deleted in new
chr17	28591697	28599005	chr17:28591697-28599005	0	-	28592432	28598946	789624	4	175,493,126,110,	0,284,6812,7198,
#Partially deleted in new
chr17	28591697	28598997	chr17:28591697-28598997	0	-	28592432	28598946	789624	4	175,496,126,102,	0,284,6812,7198,
#Partially deleted in new
chr17	28592471	28598999	chr17:28592471-28598999	0	-	28592471	28598946	789624	3	595,171,104,	0,5993,6424,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	28598789	28617377	chr17:28598789-28617377	3	+	28598789	28598789	8553170	2	1050,1093,	0,17495,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	28599132	28606910	chr17:28599132-28606910	1	+	28599132	28599132	8553170	3	114,142,615,	0,565,7163,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	28599155	28616526	chr17:28599155-28616526	1	+	28599155	28599155	789624	3	91,158,242,	0,542,17129,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	28601826	28602284	chr17:28601826-28602284	3	-	28601826	28601826	8553170	1	458,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	28603469	28614197	chr17:28603469-28614197	0	-	28612045	28614161	8553170	8	581,940,28,41,69,84,249,111,	0,806,8298,8574,9608,9792,9970,10617,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	28605045	28614181	chr17:28605045-28614181	3	-	28605167	28614161	789624	3	170,246,95,	0,8394,9041,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	28607962	28609730	chr17:28607962-28609730	3	+	28607962	28607962	8553170	2	585,498,	0,1270,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	28607963	28610938	chr17:28607963-28610938	0	-	28607963	28607963	8553170	1	2975,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	28609997	28611500	chr17:28609997-28611500	0	-	28610477	28611500	789624	3	702,111,108,	0,1145,1395,
#Deleted in new
chr17	28610419	28612366	chr17:28610419-28612366	0	-	28611552	28612366	789624	6	280,111,264,28,41,105,	0,723,973,1348,1624,1842,
#Deleted in new
chr17	28610477	28614161	chr17:28610477-28614161	3	-	28610477	28614161	789624	12	222,111,89,90,28,41,105,70,69,84,249,75,	0,665,915,1089,1290,1566,1784,2140,2600,2784,2962,3609,
#Deleted in new
chr17	28611543	28614193	chr17:28611543-28614193	0	-	28611543	28611543	8553170	9	113,28,41,105,70,69,84,249,107,	0,224,500,718,1074,1534,1718,1896,2543,
#Deleted in new
chr17	28611796	28614185	chr17:28611796-28614185	0	-	28611796	28611796	8553170	5	70,69,84,249,99,	0,1281,1465,1643,2290,
#Deleted in new
chr17	28611931	28617375	chr17:28611931-28617375	1	+	28611931	28611931	8553170	3	173,287,1091,	0,334,4353,
#Deleted in new
chr17	28612325	28613609	chr17:28612325-28613609	0	-	28612325	28612325	8553170	4	362,57,84,170,	0,764,936,1114,
#Deleted in new
chr17	28612338	28613820	chr17:28612338-28613820	0	-	28612338	28612338	8553170	5	28,70,69,84,381,	0,279,739,923,1101,
#Deleted in new
chr17	28612342	28614183	chr17:28612342-28614183	0	-	28612342	28614161	789624	6	24,70,57,84,249,97,	0,275,747,919,1097,1744,
#Deleted in new
chr17	28612598	28614197	chr17:28612598-28614197	0	-	28612598	28612598	8553170	5	89,69,84,249,111,	0,479,663,841,1488,
#Deleted in new
chr17	28612977	28614182	chr17:28612977-28614182	0	-	28612977	28612977	8553170	4	169,84,249,96,	0,284,462,1109,
#Deleted in new
chr17	28613031	28614200	chr17:28613031-28614200	0	-	28613031	28614161	789624	4	115,84,246,114,	0,230,408,1055,
#Partially deleted in new
chr17	28614439	28645131	chr17:28614439-28645131	3	-	28615063	28645056	789624	39	807,135,102,131,136,111,87,181,122,156,122,183,100,207,158,295,203,100,191,221,119,203,192,1093,206,259,164,119,146,68,125,124,190,61,119,148,50,130,143,	0,1224,1656,1939,2178,2449,2792,4351,5214,5420,6069,6548,6959,9320,9793,13825,17039,17380,17609,18502,18843,19109,19455,20077,22525,23396,23812,24084,24875,25135,25461,26120,27449,27835,28429,28724,29170,29618,30549,
#Partially deleted in new
chr17	28614877	28645454	chr17:28614877-28645454	1	-	28615063	28642954	789624	39	369,135,102,131,136,111,87,181,122,156,122,183,100,207,158,295,203,100,191,221,119,203,192,1093,206,259,164,119,146,68,125,124,190,61,119,148,50,130,30,	0,786,1218,1501,1740,2011,2354,3913,4776,4982,5631,6110,6521,8882,9355,13387,16601,16942,17171,18064,18405,18671,19017,19639,22087,22958,23374,23646,24437,24697,25023,25682,27011,27397,27991,28286,28732,29180,30547,
#Partially deleted in new
chr17	28614881	28645454	chr17:28614881-28645454	1	-	28615063	28642954	789624	39	365,135,102,131,136,107,91,181,122,156,122,183,100,207,158,295,203,100,191,221,119,203,192,1093,206,259,164,119,146,68,125,124,190,61,119,148,50,130,30,	0,782,1214,1497,1736,2007,2346,3909,4772,4978,5627,6106,6517,8878,9351,13383,16597,16938,17167,18060,18401,18667,19013,19635,22083,22954,23370,23642,24433,24693,25019,25678,27007,27393,27987,28282,28728,29176,30543,
#Deleted in new
chr17	28615683	28617372	chr17:28615683-28617372	0	+	28615683	28615683	8553170	1	1689,	0,
#Deleted in new
chr17	28616259	28616934	chr17:28616259-28616934	0	-	28616259	28616259	8553170	3	250,136,46,	0,358,629,
#Partially deleted in new
chr17	28616666	28619775	chr17:28616666-28619775	0	-	28616666	28616666	8553170	4	87,87,181,122,	0,565,2124,2987,
#Partially deleted in new
chr17	28618717	28620060	chr17:28618717-28620060	0	-	28618717	28618717	8553170	3	254,122,201,	0,936,1142,
#Partially deleted in new
chr17	28631483	28633653	chr17:28631483-28633653	0	-	28631483	28633653	789624	6	198,100,191,221,47,105,	0,336,565,1458,1799,2065,
#Partially deleted in new
chr17	28632080	28633476	chr17:28632080-28633476	0	-	28632080	28632080	8553170	3	159,221,194,	0,861,1202,
#Deleted in new
chr17	28633205	28634740	chr17:28633205-28634740	0	+	28633205	28633205	8553170	3	230,164,158,	0,691,1377,
#Deleted in new
chr17	28633246	28635950	chr17:28633246-28635950	3	+	28633246	28633246	8553170	3	189,242,885,	0,572,1819,
#Deleted in new
chr17	28633685	28634670	chr17:28633685-28634670	0	-	28633685	28633685	8553170	2	401,154,	0,831,
#Partially deleted in new
chr17	28639060	28645155	chr17:28639060-28645155	0	-	28639060	28639060	8553170	11	400,68,125,124,190,61,119,148,50,130,167,	0,514,840,1499,2828,3214,3808,4103,4549,4997,5928,
#Partially deleted in new
chr17	28639314	28641930	chr17:28639314-28641930	0	-	28640604	28641930	789624	5	146,68,125,68,42,	0,260,586,1245,2574,
#Partially deleted in new
chr17	28639315	28645111	chr17:28639315-28645111	0	-	28639315	28639315	8553170	9	145,451,124,190,61,119,496,130,123,	0,259,1244,2573,2959,3553,3848,4742,5673,
#Partially deleted in new
chr17	28639686	28645148	chr17:28639686-28645148	0	-	28643248	28645056	789624	8	339,124,190,61,119,148,130,160,	0,873,2202,2588,3182,3477,4371,5302,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	28639965	28642481	chr17:28639965-28642481	0	-	28639965	28639965	8553170	4	60,124,190,207,	0,594,1923,2309,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	28640396	28642047	chr17:28640396-28642047	0	-	28640396	28640396	8553170	2	287,159,	0,1492,
#Partially deleted in new
chr17	28642062	28643280	chr17:28642062-28643280	0	-	28642062	28642062	8553170	3	273,119,117,	0,806,1101,
#Partially deleted in new
chr17	28648355	28662175	chr17:28648355-28662175	3	-	28648988	28661876	789624	3	921,197,450,	0,6931,13370,
#Partially deleted in new
chr17	28648588	28662180	chr17:28648588-28662180	0	-	28648588	28648588	8553170	2	688,135,	0,13457,
#Partially deleted in new
chr17	28648588	28662185	chr17:28648588-28662185	0	-	28648588	28648588	789624	3	688,197,140,	0,6698,13457,
#Partially deleted in new
chr17	28648740	28662132	chr17:28648740-28662132	0	-	28648740	28648740	8553170	3	397,197,87,	0,6546,13305,
#Partially deleted in new
chr17	28648742	28655335	chr17:28648742-28655335	0	-	28649035	28655335	789624	2	395,49,	0,6544,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	28648841	28657839	chr17:28648841-28657839	0	-	28648841	28648841	8553170	4	435,57,197,86,	0,2644,6445,8912,
#Partially deleted in new
chr17	28648924	28661819	chr17:28648924-28661819	0	-	28651553	28661819	789624	4	352,92,197,94,	0,2561,6362,12801,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	28648970	28656322	chr17:28648970-28656322	0	-	28648970	28648970	8553170	2	306,1036,	0,6316,
#Partially deleted in new
chr17	28649126	28662189	chr17:28649126-28662189	0	-	28649126	28649126	8553170	4	150,92,197,144,	0,2359,6160,12919,
#Deleted in new
chr17	28655556	28655983	chr17:28655556-28655983	7	+	28655556	28655556	16724991	1	427,	0,
#Deleted in new
chr17	28660487	28661916	chr17:28660487-28661916	0	-	28660487	28660487	8553170	2	733,191,	0,1238,
#Partially deleted in new
chr17	28662090	28702684	chr17:28662090-28702684	3	+	28673401	28701625	789624	37	252,140,159,77,193,85,274,102,117,90,143,149,99,130,151,155,196,140,118,77,136,138,168,128,208,148,143,141,196,239,114,125,113,78,167,188,1246,	0,11280,12192,12446,12879,13310,14066,15624,15985,16454,16730,19165,19791,20636,20851,21177,21530,22495,22753,24248,24563,24997,25213,26000,27263,27991,28830,31605,33261,34753,35529,35815,37690,38082,38255,38850,39348,
#Boundary problem: need 38, got 0, diff 38, mapped 0.0
chr17	28662197	28701735	chr17:28662197-28701735	1	+	28673401	28701625	789624	38	145,102,140,159,77,193,85,274,102,117,90,143,149,99,130,151,155,196,140,118,77,136,138,168,128,208,148,143,141,196,239,114,125,113,78,167,188,297,	0,10559,11173,12085,12339,12772,13203,13959,15517,15878,16347,16623,19058,19684,20529,20744,21070,21423,22388,22646,24141,24456,24890,25106,25893,27156,27884,28723,31498,33154,34646,35422,35708,37583,37975,38148,38743,39241,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	28670053	28672804	chr17:28670053-28672804	3	-	28670053	28670053	8553170	2	339,160,	0,2591,
#Partially deleted in new
chr17	28670907	28674323	chr17:28670907-28674323	0	+	28673401	28674323	789624	3	324,140,41,	0,2463,3375,
#Partially deleted in new
chr17	28673401	28674999	chr17:28673401-28674999	0	+	28673401	28673563	789624	4	217,159,77,30,	0,881,1135,1568,
#Partially deleted in new
chr17	28674748	28675432	chr17:28674748-28675432	0	+	28674748	28674748	8553170	2	414,32,	0,652,
#Partially deleted in new
chr17	28681128	28682188	chr17:28681128-28682188	0	+	28681128	28681128	8553170	2	276,307,	0,753,
#Partially deleted in new
chr17	28686916	28689427	chr17:28686916-28689427	0	+	28686916	28686916	8553170	4	309,168,128,74,	0,387,1174,2437,
#Partially deleted in new
chr17	28687349	28688535	chr17:28687349-28688535	0	+	28687349	28687349	8553170	2	122,445,	0,741,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	28688669	28691849	chr17:28688669-28691849	0	+	28688669	28688669	8553170	3	892,148,929,	0,1412,2251,
#Partially deleted in new
chr17	28695009	28696883	chr17:28695009-28696883	0	+	28695009	28695009	8553170	2	538,40,	0,1834,
#Deleted in new
chr17	28697911	28701539	chr17:28697911-28701539	0	+	28697911	28697911	8553170	5	119,113,78,783,101,	0,1869,2261,2434,3527,
#Deleted in new
chr17	28699788	28700464	chr17:28699788-28700464	0	+	28699788	28699788	8553170	2	462,119,	0,557,
#Partially deleted in new
chr17	28703196	28711854	chr17:28703196-28711854	3	-	28703557	28711660	789624	4	1016,129,136,285,	0,1110,1511,8373,
#Partially deleted in new
chr17	28703515	28711660	chr17:28703515-28711660	1	-	28703557	28711660	789624	5	697,129,136,97,78,	0,791,1192,3161,8067,
#Partially deleted in new
chr17	28703624	28711747	chr17:28703624-28711747	1	-	28704177	28711660	789624	2	588,178,	0,7945,
#Partially deleted in new
chr17	28703713	28707884	chr17:28703713-28707884	0	-	28703713	28704043	789624	4	499,129,136,47,	0,593,994,4124,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	28703915	28707449	chr17:28703915-28707449	0	-	28703915	28703915	8553170	3	297,129,2742,	0,391,792,
#Partially deleted in new
chr17	28704007	28711682	chr17:28704007-28711682	0	-	28704468	28711660	789624	5	205,310,136,84,113,	0,299,700,2672,7562,
#Partially deleted in new
chr17	28704080	28711299	chr17:28704080-28711299	0	-	28704080	28704080	8553170	4	132,310,136,429,	0,226,627,6790,
#Deleted in new
chr17	28704083	28706164	chr17:28704083-28706164	0	-	28704083	28704083	8553170	4	129,129,136,332,	0,223,624,1749,
#Partially deleted in new
chr17	28704306	28711086	chr17:28704306-28711086	0	-	28704306	28704306	8553170	4	129,136,84,216,	0,401,2373,6564,
#Partially deleted in new
chr17	28704530	28711091	chr17:28704530-28711091	0	-	28704530	28704530	8553170	4	86,136,84,221,	0,177,2149,6340,
#Partially deleted in new
chr17	28714280	28717890	chr17:28714280-28717890	1	-	28714642	28717266	789624	10	430,108,91,82,52,65,102,66,92,678,	0,512,751,914,1175,1360,1519,1712,2622,2932,
#Partially deleted in new
chr17	28714280	28718268	chr17:28714280-28718268	1	-	28714571	28718267	789624	10	351,60,82,52,65,102,69,92,79,147,	0,782,914,1175,1360,1519,1712,2622,2932,3841,
#Partially deleted in new
chr17	28714283	28718415	chr17:28714283-28718415	3	-	28714642	28717266	789624	11	427,108,91,82,52,65,102,66,92,213,294,	0,509,748,911,1172,1357,1516,1709,2619,2929,3838,
#Partially deleted in new
chr17	28714283	28717748	chr17:28714283-28717748	1	-	28716052	28717708	789624	10	427,108,91,58,52,65,102,66,92,536,	0,509,748,935,1172,1357,1516,1709,2619,2929,
#Partially deleted in new
chr17	28714283	28718166	chr17:28714283-28718166	1	-	28714571	28717266	789624	10	348,60,82,52,65,102,69,92,79,45,	0,779,911,1172,1357,1516,1709,2619,2929,3838,
#Partially deleted in new
chr17	28714284	28718183	chr17:28714284-28718183	1	-	28714642	28717266	789624	10	426,108,91,82,52,65,102,92,213,62,	0,508,747,910,1171,1356,1515,2618,2928,3837,
#Partially deleted in new
chr17	28714284	28718166	chr17:28714284-28718166	1	-	28714642	28717266	789624	11	426,108,91,58,52,65,102,66,92,79,45,	0,508,747,934,1171,1356,1515,1708,2618,2928,3837,
#Deleted in new
chr17	28714286	28715485	chr17:28714286-28715485	0	-	28714286	28714286	8553170	4	424,108,183,30,	0,506,745,1169,
#Partially deleted in new
chr17	28714290	28717393	chr17:28714290-28717393	0	-	28715057	28717266	789624	10	420,108,95,20,52,65,102,66,92,181,	0,502,737,904,1165,1350,1509,1702,2612,2922,
#Deleted in new
chr17	28714298	28715718	chr17:28714298-28715718	0	-	28714298	28714298	8553170	3	978,52,78,	0,1157,1342,
#Partially deleted in new
chr17	28714624	28718161	chr17:28714624-28718161	1	-	28714642	28717266	789624	11	86,108,91,82,52,65,102,66,92,79,40,	0,168,407,570,831,1016,1175,1368,2278,2588,3497,
#Partially deleted in new
chr17	28714646	28718405	chr17:28714646-28718405	0	-	28714646	28718267	789624	9	64,108,91,82,52,65,102,66,284,	0,146,385,548,809,994,1153,1346,3475,
#Partially deleted in new
chr17	28714672	28718167	chr17:28714672-28718167	0	-	28714672	28718167	789624	8	38,108,91,58,52,65,9,46,	0,120,359,546,783,968,1127,3449,
#Partially deleted in new
chr17	28714792	28717850	chr17:28714792-28717850	1	-	28715483	28717708	789624	8	108,91,58,52,65,102,66,638,	0,239,426,663,848,1007,1200,2420,
#Partially deleted in new
chr17	28714872	28718222	chr17:28714872-28718222	0	-	28714872	28717266	789624	10	28,91,82,52,65,102,66,92,381,101,	0,159,322,583,768,927,1120,2030,2340,3249,
#Partially deleted in new
chr17	28714872	28718429	chr17:28714872-28718429	0	-	28714872	28717266	789624	10	28,91,82,52,65,102,66,92,79,60,	0,159,322,583,768,927,1120,2030,2340,3497,
#Deleted in new
chr17	28714905	28715518	chr17:28714905-28715518	0	-	28714905	28714905	8553170	2	371,63,	0,550,
#Partially deleted in new
chr17	28715031	28717708	chr17:28715031-28717708	1	-	28715483	28717708	789624	6	91,82,52,65,102,496,	0,163,424,609,768,2181,
#Partially deleted in new
chr17	28715259	28718167	chr17:28715259-28718167	0	-	28715259	28717266	789624	8	17,52,65,102,66,92,186,46,	0,196,381,540,733,1643,1953,2862,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	28715438	28716373	chr17:28715438-28716373	0	-	28715438	28715438	8553170	3	69,261,381,	0,202,554,
#Partially deleted in new
chr17	28715828	28717708	chr17:28715828-28717708	1	-	28716052	28717708	789624	4	73,69,92,496,	0,164,1074,1384,
#Partially deleted in new
chr17	28715895	28718268	chr17:28715895-28718268	0	-	28717319	28718267	789624	5	6,69,92,213,147,	0,97,1007,1317,2226,
#Partially deleted in new
chr17	28716052	28718167	chr17:28716052-28718167	0	-	28716052	28717266	789624	4	9,92,435,46,	0,850,1160,2069,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	28716236	28717707	chr17:28716236-28717707	0	-	28716236	28716236	8553170	2	758,495,	0,976,
#Deleted in new
chr17	28716755	28718167	chr17:28716755-28718167	0	-	28716755	28716755	8553170	3	239,213,46,	0,457,1366,
#Deleted in new
chr17	28716902	28718167	chr17:28716902-28718167	0	-	28716902	28717266	789624	3	92,408,46,	0,310,1219,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	28719392	28724359	chr17:28719392-28724359	3	+	28720005	28723881	0	5	638,184,177,70,493,	0,1314,3330,4178,4474,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	28719990	28721261	chr17:28719990-28721261	0	+	28719990	28719990	8553170	2	40,555,	0,716,
#Partially deleted in new
chr17	28720078	28723936	chr17:28720078-28723936	1	+	28722771	28723881	789624	5	135,184,177,70,70,	0,628,2644,3492,3788,
#Partially deleted in new
chr17	28720243	28723936	chr17:28720243-28723936	1	+	28720291	28723881	789624	5	187,184,177,70,70,	0,463,2479,3327,3623,
#Partially deleted in new
chr17	28720263	28723933	chr17:28720263-28723933	0	+	28720263	28723881	789624	6	65,17,184,177,70,67,	0,150,443,2459,3307,3603,
#Partially deleted in new
chr17	28720298	28723992	chr17:28720298-28723992	0	+	28720298	28723881	789624	5	30,184,177,70,126,	0,408,2424,3272,3568,
#Deleted in new
chr17	28720549	28720616	chr17:28720549-28720616	3	+	28720549	28720549	789624	1	67,	0,
#Partially deleted in new
chr17	28720568	28723936	chr17:28720568-28723936	1	+	28722771	28723881	789624	4	322,177,70,70,	0,2154,3002,3298,
#Partially deleted in new
chr17	28720704	28723800	chr17:28720704-28723800	0	+	28720704	28723718	789624	3	186,177,230,	0,2018,2866,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	28721486	28722877	chr17:28721486-28722877	3	-	28721486	28721486	8553170	2	431,468,	0,923,
#Deleted in new
chr17	28722581	28722653	chr17:28722581-28722653	3	+	28722581	28722581	789624	1	72,	0,
#Deleted in new
chr17	28723299	28723937	chr17:28723299-28723937	0	+	28723299	28723299	8553170	2	341,71,	0,567,
#Deleted in new
chr17	28723428	28723492	chr17:28723428-28723492	3	+	28723428	28723428	789624	1	64,	0,
#Deleted in new
chr17	28723681	28723753	chr17:28723681-28723753	3	+	28723681	28723681	789624	1	72,	0,
#Deleted in new
chr17	28724347	28726208	chr17:28724347-28726208	3	-	28724509	28726097	789624	4	546,83,83,305,	0,956,1133,1556,
#Deleted in new
chr17	28724357	28724850	chr17:28724357-28724850	0	-	28724604	28724850	789624	2	296,112,	0,381,
#Deleted in new
chr17	28724452	28726932	chr17:28724452-28726932	1	-	28724509	28726808	789624	4	441,83,83,177,	0,851,1028,2303,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	28724598	28727935	chr17:28724598-28727935	0	-	28724598	28725544	789624	4	295,83,83,117,	0,705,882,3220,
#Partially deleted in new
chr17	28725896	28735367	chr17:28725896-28735367	0	+	28734052	28735367	789624	4	76,206,233,128,	0,8086,8875,9343,
#Partially deleted in new
chr17	28725919	28735309	chr17:28725919-28735309	0	+	28725919	28725919	8553170	3	84,206,538,	0,8063,8852,
#Partially deleted in new
chr17	28725927	28735371	chr17:28725927-28735371	0	+	28734052	28735371	789624	4	76,206,233,132,	0,8055,8844,9312,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	28728779	28743455	chr17:28728779-28743455	3	+	28728813	28741987	789624	15	81,206,233,132,209,62,182,151,77,118,151,164,159,159,1497,	0,5203,5992,6460,8526,8895,9039,9315,9891,10304,11683,12042,12298,12633,13179,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	28728803	28742429	chr17:28728803-28742429	0	+	28728813	28738671	789624	11	57,206,233,132,431,182,151,77,42,73,471,	0,5179,5968,6436,8502,9015,9291,9867,10280,12695,13155,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	28728813	28734525	chr17:28728813-28734525	0	+	28728813	28728813	8553170	2	47,543,	0,5169,
#Partially deleted in new
chr17	28728815	28735352	chr17:28728815-28735352	0	+	28728815	28728815	8553170	4	45,206,183,113,	0,5167,5956,6424,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	28732962	28742765	chr17:28732962-28742765	3	-	28732962	28732962	8553170	2	25,417,	0,9386,
#Partially deleted in new
chr17	28735277	28738245	chr17:28735277-28738245	0	+	28735277	28738245	789624	5	94,274,81,182,151,	0,2028,2378,2541,2817,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	28742229	28743102	chr17:28742229-28743102	1	-	28742229	28742229	8553170	2	198,193,	0,680,
#Deleted in new
chr17	28743983	28750958	chr17:28743983-28750958	3	+	28744112	28749577	0	7	272,52,105,162,162,156,2014,	0,3229,3859,4033,4278,4527,4961,
#Deleted in new
chr17	28744004	28749577	chr17:28744004-28749577	1	+	28744112	28749577	789624	3	251,16,276,	0,3208,5297,
#Deleted in new
chr17	28744017	28745518	chr17:28744017-28745518	0	+	28744112	28744707	789624	3	238,257,223,	0,683,1278,
#Deleted in new
chr17	28744018	28748423	chr17:28744018-28748423	0	+	28744018	28744018	8553170	4	237,52,336,162,	0,3194,3824,4243,
#Deleted in new
chr17	28744022	28747732	chr17:28744022-28747732	0	+	28744022	28744022	8553170	2	233,515,	0,3195,
#Deleted in new
chr17	28744029	28748326	chr17:28744029-28748326	0	+	28744112	28748326	789624	5	226,52,126,162,65,	0,3183,3792,3987,4232,
#Deleted in new
chr17	28744035	28748603	chr17:28744035-28748603	0	+	28744112	28747236	789624	6	220,47,105,162,162,93,	0,3182,3807,3981,4226,4475,
#Deleted in new
chr17	28744039	28750037	chr17:28744039-28750037	1	+	28744112	28749968	789624	8	216,52,105,162,162,156,375,228,	0,3173,3803,3977,4222,4471,4905,5770,
#Deleted in new
chr17	28744054	28747713	chr17:28744054-28747713	0	+	28744054	28744054	8553170	2	201,501,	0,3158,
#Deleted in new
chr17	28744084	28749644	chr17:28744084-28749644	1	+	28744112	28749577	789624	5	171,52,105,162,193,	0,3128,3758,3932,5367,
#Deleted in new
chr17	28744222	28748326	chr17:28744222-28748326	0	+	28744222	28747907	789624	5	33,179,105,162,65,	0,2990,3620,3794,4039,
#Deleted in new
chr17	28745568	28747652	chr17:28745568-28747652	3	-	28745568	28745568	8553170	2	31,490,	0,1594,
#Deleted in new
chr17	28746742	28748297	chr17:28746742-28748297	0	+	28748070	28748297	789624	4	522,105,162,36,	0,1100,1274,1519,
#Deleted in new
chr17	28747015	28748423	chr17:28747015-28748423	0	+	28748070	28748423	789624	5	104,52,105,162,162,	0,197,827,1001,1246,
#Deleted in new
chr17	28747213	28749023	chr17:28747213-28749023	0	+	28747213	28748325	789624	6	51,105,119,162,156,79,	0,629,803,1048,1297,1731,
#Deleted in new
chr17	28747581	28748153	chr17:28747581-28748153	0	+	28747581	28747581	8553170	2	173,311,	0,261,
#Deleted in new
chr17	28747729	28749034	chr17:28747729-28749034	0	+	28747729	28747729	8553170	5	218,162,162,156,90,	0,287,532,781,1215,
#Deleted in new
chr17	28748123	28748742	chr17:28748123-28748742	0	+	28748123	28748123	8553170	3	55,162,232,	0,138,387,
#Deleted in new
chr17	28749730	28750079	chr17:28749730-28750079	3	-	28749730	28749730	8553170	2	20,267,	0,82,
#Partially deleted in new
chr17	28755977	28777171	chr17:28755977-28777171	1	-	28758269	28759574	789624	3	3787,122,124,	0,10608,21070,
#Partially deleted in new
chr17	28755979	28842823	chr17:28755979-28842823	3	-	28758269	28766667	789624	3	3897,122,142,	0,10606,86702,
#Partially deleted in new
chr17	28757376	28842784	chr17:28757376-28842784	1	-	28759759	28766667	789624	3	2388,122,103,	0,9209,85305,
#Partially deleted in new
chr17	28757389	28812435	chr17:28757389-28812435	1	-	28758269	28766667	789624	3	2487,122,227,	0,9196,54819,
#Partially deleted in new
chr17	28759240	28842727	chr17:28759240-28842727	0	-	28759240	28766667	789624	5	636,122,48,34,46,	0,7345,31137,75052,83441,
#Partially deleted in new
chr17	28759392	28812224	chr17:28759392-28812224	1	-	28759759	28766667	789624	3	372,122,67,	0,7193,52765,
#Partially deleted in new
chr17	28759397	28854990	chr17:28759397-28854990	1	-	28759759	28766667	789624	4	367,122,34,41,	0,7188,74895,95552,
#Partially deleted in new
chr17	28759421	28842790	chr17:28759421-28842790	0	-	28759421	28766667	789624	4	455,122,34,109,	0,7164,74871,83260,
#Partially deleted in new
chr17	28759480	28842790	chr17:28759480-28842790	1	-	28759759	28766667	789624	4	284,122,34,109,	0,7105,74812,83201,
#Partially deleted in new
chr17	28759550	28855232	chr17:28759550-28855232	0	-	28759550	28766667	789624	3	326,122,283,	0,7035,95399,
#Partially deleted in new
chr17	28759550	28842783	chr17:28759550-28842783	0	-	28759550	28766667	789624	4	326,122,48,102,	0,7035,30827,83131,
#Partially deleted in new
chr17	28759570	28842839	chr17:28759570-28842839	1	-	28759759	28766667	789624	5	194,122,48,34,158,	0,7015,30807,74722,83111,
#Partially deleted in new
chr17	28759591	28842792	chr17:28759591-28842792	1	-	28759759	28766667	789624	5	173,122,102,48,111,	0,6994,17456,30786,83090,
#Partially deleted in new
chr17	28759827	28767104	chr17:28759827-28767104	0	-	28759827	28766667	789624	2	49,519,	0,6758,
#Partially deleted in new
chr17	28759849	28842823	chr17:28759849-28842823	0	-	28762073	28766667	789624	4	27,171,122,142,	0,2136,6736,82832,
#Partially deleted in new
chr17	28802443	28802822	chr17:28802443-28802822	7	+	28802443	28802443	16724991	1	379,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	28834721	28834822	chr17:28834721-28834822	3	+	28834721	28834721	8553170	1	101,	0,
#Partially deleted in new
chr17	28848859	28849592	chr17:28848859-28849592	7	+	28848859	28848859	16724991	2	101,316,	0,417,
#Partially deleted in new
chr17	28854937	28861067	chr17:28854937-28861067	3	+	28855034	28860553	789624	10	380,128,78,47,62,113,249,150,81,637,	0,1326,1567,3001,3208,3436,3638,4026,4265,5493,
#Partially deleted in new
chr17	28855009	28858775	chr17:28855009-28858775	0	+	28855034	28856609	789624	7	308,128,181,47,62,113,200,	0,1254,1495,2929,3136,3364,3566,
#Partially deleted in new
chr17	28855028	28858395	chr17:28855028-28858395	0	+	28855028	28855028	8553170	5	289,128,78,62,22,	0,1235,1476,3117,3345,
#Partially deleted in new
chr17	28855035	28861059	chr17:28855035-28861059	0	+	28855035	28859025	789624	10	282,128,78,47,62,113,58,150,81,629,	0,1228,1469,2903,3110,3338,3540,3928,4167,5395,
#Partially deleted in new
chr17	28855045	28859113	chr17:28855045-28859113	0	+	28855045	28859113	789624	7	272,128,78,47,62,113,150,	0,1218,1459,2893,3100,3328,3918,
#Deleted in new
chr17	28858021	28859113	chr17:28858021-28859113	0	+	28858021	28858021	8553170	4	186,113,249,150,	0,352,554,942,
#Partially deleted in new
chr17	28858037	28861009	chr17:28858037-28861009	0	+	28858037	28858037	8553170	5	449,249,150,81,579,	0,538,926,1165,2393,
#Partially deleted in new
chr17	28858984	28861061	chr17:28858984-28861061	0	+	28858984	28860609	789624	3	129,81,485,	0,218,1592,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	28861071	28861966	chr17:28861071-28861966	3	-	28861071	28861071	8553170	1	895,	0,
#Partially deleted in new
chr17	28861368	28861440	chr17:28861368-28861440	3	-	28861368	28861368	5263520	1	72,	0,
#Partially deleted in new
chr17	28861370	28861438	chr17:28861370-28861438	3	+	28861370	28861370	5263520	1	68,	0,
#Partially deleted in new
chr17	28861532	28861618	chr17:28861532-28861618	3	-	28861532	28861532	5263520	1	86,	0,
#Partially deleted in new
chr17	28861654	28861730	chr17:28861654-28861730	3	-	28861654	28861654	5263520	1	76,	0,
#Partially deleted in new
chr17	28879334	28897652	chr17:28879334-28897652	1	-	28880560	28897574	789624	13	1265,150,184,215,120,114,119,124,91,74,91,82,127,	0,1378,1857,2479,2783,3002,3238,3773,4890,6277,6522,9610,18191,
#Partially deleted in new
chr17	28879334	28897679	chr17:28879334-28897679	3	-	28880560	28897574	789624	11	1265,150,184,215,120,114,119,124,91,82,154,	0,1378,1857,2479,2783,3002,3238,3773,4890,9610,18191,
#Partially deleted in new
chr17	28879338	28897653	chr17:28879338-28897653	0	-	28883187	28897574	789624	12	1261,150,184,215,120,114,119,124,91,91,82,128,	0,1374,1853,2475,2779,2998,3234,3769,4886,6518,9606,18187,
#Partially deleted in new
chr17	28879340	28897652	chr17:28879340-28897652	0	-	28879340	28879340	8553170	10	1259,150,184,215,120,114,119,124,91,127,	0,1372,1851,2473,2777,2996,3232,3767,6516,18185,
#Deleted in new
chr17	28879340	28882659	chr17:28879340-28882659	0	-	28879340	28879340	8553170	2	179,87,	0,3232,
#Partially deleted in new
chr17	28879340	28897652	chr17:28879340-28897652	1	-	28880560	28897574	789624	11	1259,150,184,215,120,114,119,124,91,82,127,	0,1372,1851,2473,2777,2996,3232,3767,6516,9604,18185,
#Partially deleted in new
chr17	28880577	28897588	chr17:28880577-28897588	0	-	28882615	28897574	789624	9	22,150,184,215,120,114,119,82,63,	0,135,614,1236,1540,1759,1995,8367,16948,
#Deleted in new
chr17	28881343	28885947	chr17:28881343-28885947	0	-	28881343	28885947	789624	7	32,215,120,114,119,55,91,	0,470,774,993,1229,1833,4513,
#Partially deleted in new
chr17	28881774	28897588	chr17:28881774-28897588	0	-	28881774	28881774	8553170	5	254,120,114,165,99,	0,343,562,798,15715,
#Deleted in new
chr17	28882632	28886011	chr17:28882632-28886011	0	-	28882632	28882632	8553170	4	59,124,91,155,	0,475,1592,3224,
#Partially deleted in new
chr17	28882739	28897654	chr17:28882739-28897654	0	-	28882739	28882739	8553170	3	492,82,129,	0,6205,14786,
#Deleted in new
chr17	28882978	28889026	chr17:28882978-28889026	0	-	28882978	28882978	8553170	3	253,91,82,	0,1246,5966,
#Partially deleted in new
chr17	28897737	28899402	chr17:28897737-28899402	3	+	28897737	28897737	8553170	3	249,216,118,	0,552,1547,
#Partially deleted in new
chr17	28897780	28903071	chr17:28897780-28903071	3	-	28898440	28902944	789624	5	1112,312,124,119,254,	0,3209,3712,4802,5037,
#Partially deleted in new
chr17	28897780	28903071	chr17:28897780-28903071	1	-	28898440	28902678	789624	4	1112,312,124,489,	0,3209,3712,4802,
#Deleted in new
chr17	28897780	28898883	chr17:28897780-28898883	1	+	28897780	28897780	8553170	1	1103,	0,
#Partially deleted in new
chr17	28897783	28902965	chr17:28897783-28902965	1	-	28898440	28902944	789624	3	1109,312,148,	0,3206,5034,
#Partially deleted in new
chr17	28898822	28899523	chr17:28898822-28899523	0	-	28898822	28898822	8553170	2	70,397,	0,304,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	28901111	28902126	chr17:28901111-28902126	0	-	28901111	28901111	8553170	2	190,634,	0,381,
#Partially deleted in new
chr17	28905249	28951771	chr17:28905249-28951771	3	-	28906182	28950960	0	15	1268,139,83,99,144,126,796,159,165,133,121,394,73,182,877,	0,1606,2340,3533,4976,5862,7232,8629,12035,13893,16438,18659,21741,44815,45645,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	28905252	28951307	chr17:28905252-28951307	1	-	28910034	28950960	0	11	5117,126,796,159,165,133,121,394,73,182,413,	0,5859,7229,8626,12032,13890,16435,18656,21738,44812,45642,
#Partially deleted in new
chr17	28906104	28917408	chr17:28906104-28917408	0	-	28907665	28917408	789624	6	413,139,83,99,44,91,	0,751,1485,2678,4121,11213,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	28909569	28950954	chr17:28909569-28950954	0	-	28909569	28909569	8553170	10	800,126,796,159,165,133,121,3155,182,60,	0,1542,2912,4309,7715,9573,12118,14339,40495,41325,
#Partially deleted in new
chr17	28910054	28926200	chr17:28910054-28926200	0	-	28910054	28910054	8553170	10	315,122,126,796,159,165,133,121,394,220,	0,657,1057,2427,3824,7230,9088,11633,13854,15926,
#Partially deleted in new
chr17	28910073	28951357	chr17:28910073-28951357	0	-	28911355	28950960	789624	12	296,126,55,796,159,165,133,121,394,73,182,463,	0,1038,1256,2408,3805,7211,9069,11614,13835,16917,39991,40821,
#Deleted in new
chr17	28910225	28913094	chr17:28910225-28913094	0	-	28910225	28913094	789624	3	144,63,613,	0,886,2256,
#Deleted in new
chr17	28911132	28912786	chr17:28911132-28912786	0	-	28911132	28911132	8553170	2	252,305,	0,1349,
#Partially deleted in new
chr17	28912143	28951490	chr17:28912143-28951490	1	-	28912455	28950960	0	9	1134,159,165,133,121,394,73,182,596,	0,1735,5141,6999,9544,11765,14847,37921,38751,
#Partially deleted in new
chr17	28913112	28951771	chr17:28913112-28951771	0	-	28921739	28950960	789624	8	165,159,165,133,121,73,182,877,	0,766,4172,6030,8575,13878,36952,37782,
#Partially deleted in new
chr17	28913201	28923947	chr17:28913201-28923947	0	-	28917445	28923947	789624	5	76,159,165,121,39,	0,677,4083,8486,10707,
#Partially deleted in new
chr17	28921794	28928290	chr17:28921794-28928290	0	-	28921794	28927041	789624	4	14,394,73,93,	0,2114,5196,6403,
#Partially deleted in new
chr17	28923908	28950904	chr17:28923908-28950904	0	-	28923908	28923908	8553170	5	394,92,73,182,10,	0,2873,3082,26156,26986,
#Partially deleted in new
chr17	28924048	28951606	chr17:28924048-28951606	0	-	28924048	28951604	789624	4	254,73,182,140,	0,2942,26016,27418,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	28924077	28949857	chr17:28924077-28949857	0	-	28924077	28927041	789624	4	225,73,67,190,	0,2913,20425,25590,
#Partially deleted in new
chr17	28924263	28950682	chr17:28924263-28950682	0	-	28924263	28927041	789624	4	39,73,182,261,	0,2727,25801,26158,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	28926274	28944749	chr17:28926274-28944749	3	+	28926274	28926274	789624	2	454,229,	0,18246,
#Partially deleted in new
chr17	28926540	28929965	chr17:28926540-28929965	1	+	28926540	28926540	8553170	2	188,248,	0,3177,
#Partially deleted in new
chr17	28927013	28950662	chr17:28927013-28950662	0	-	28927013	28950366	789624	2	50,598,	0,23051,
#Partially deleted in new
chr17	28927749	28929972	chr17:28927749-28929972	0	+	28927749	28927749	8553170	2	58,255,	0,1968,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	28944795	28945394	chr17:28944795-28945394	3	+	28944795	28944795	8553170	1	599,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	28950512	29056683	chr17:28950512-29056683	0	+	28950512	28950512	8553170	10	182,45,108,149,214,183,147,159,76,509,	0,2851,90170,94346,102407,102900,104032,104550,105300,105662,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	28950619	29053446	chr17:28950619-29053446	0	+	28950619	28950619	8553170	5	75,108,149,214,34,	0,90063,94239,102300,102793,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	28950642	29056683	chr17:28950642-29056683	0	+	28950642	28950642	8553170	11	52,45,187,108,149,214,183,147,159,76,509,	0,2721,60317,90040,94216,102277,102770,103902,104420,105170,105532,
#Partially deleted in new
chr17	28951859	29045007	chr17:28951859-29045007	2	+	28951859	28951859	8553170	3	596,45,149,	0,1504,92999,
#Partially deleted in new
chr17	28952438	29053133	chr17:28952438-29053133	0	+	28952438	28952438	8553170	5	38,45,187,149,214,	0,925,58521,92420,100481,
#Partially deleted in new
chr17	28954900	29006145	chr17:28954900-29006145	1	-	28955948	29005869	789624	17	1078,103,118,39,198,192,195,197,139,195,167,169,186,196,134,669,331,	0,1258,1449,1818,2144,2447,3046,4124,4433,4797,5604,5904,9061,14856,24779,26470,50914,
#Partially deleted in new
chr17	28954904	29006298	chr17:28954904-29006298	3	-	28955961	29005869	789624	17	1090,103,118,39,198,192,195,197,139,195,167,169,186,196,134,669,484,	0,1254,1445,1814,2140,2443,3042,4120,4429,4793,5600,5900,9057,14852,24775,26466,50910,
#Partially deleted in new
chr17	28954904	28981872	chr17:28954904-28981872	0	-	28955948	28981872	789624	16	1074,103,118,39,198,192,195,197,139,195,167,169,186,196,134,502,	0,1254,1445,1814,2140,2443,3042,4120,4429,4793,5600,5900,9057,14852,24775,26466,
#Partially deleted in new
chr17	28954905	28981592	chr17:28954905-28981592	0	-	28959210	28981592	789624	16	1073,103,118,39,198,192,195,197,139,140,167,169,186,196,134,222,	0,1253,1444,1813,2139,2442,3041,4119,4428,4792,5599,5899,9056,14851,24774,26465,
#Partially deleted in new
chr17	28954930	29006048	chr17:28954930-29006048	1	-	28955961	29005869	789624	18	1064,103,119,27,11,198,192,195,197,139,195,167,154,201,196,134,669,234,	0,1228,1419,1788,1816,2114,2417,3016,4094,4403,4767,5574,5874,9016,14826,24749,26440,50884,
#Partially deleted in new
chr17	28955130	29005913	chr17:28955130-29005913	1	-	28955948	29005869	789624	16	848,103,118,198,192,195,197,139,195,167,169,186,196,134,669,99,	0,1028,1219,1914,2217,2816,3894,4203,4567,5374,5674,8831,14626,24549,26240,50684,
#Deleted in new
chr17	28955130	28956439	chr17:28955130-28956439	0	-	28955633	28956439	789624	2	717,90,	0,1219,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	28956363	28957813	chr17:28956363-28957813	0	-	28956363	28956363	8553170	4	104,39,198,466,	0,355,681,984,
#Deleted in new
chr17	28960239	28960973	chr17:28960239-28960973	0	-	28960445	28960973	789624	2	432,169,	0,565,
#Partially deleted in new
chr17	28981549	29006440	chr17:28981549-29006440	0	-	28981549	28981719	789624	2	490,85,	0,24806,
#Deleted in new
chr17	29009798	29011009	chr17:29009798-29011009	3	-	29009798	29009798	8553170	3	118,363,36,	0,278,1175,
#Partially deleted in new
chr17	29012864	29016512	chr17:29012864-29016512	0	+	29012864	29012864	8553170	2	61,163,	0,3485,
#Partially deleted in new
chr17	29015341	29016512	chr17:29015341-29016512	3	+	29015341	29015341	8553170	2	329,166,	0,1005,
#Deleted in new
chr17	29021324	29021640	chr17:29021324-29021640	7	-	29021324	29021324	16724991	1	316,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	29042899	29057220	chr17:29042899-29057220	1	+	29043225	29056305	789624	8	440,149,214,183,147,159,76,1046,	0,1959,10020,10513,11645,12163,12913,13275,
#Partially deleted in new
chr17	29044217	29053592	chr17:29044217-29053592	0	+	29044942	29053592	789624	4	177,149,214,180,	0,641,8702,9195,
#Partially deleted in new
chr17	29044250	29055067	chr17:29044250-29055067	0	+	29044942	29055067	789624	6	62,149,214,183,147,5,	0,608,8669,9162,10294,10812,
#Partially deleted in new
chr17	29046639	29056225	chr17:29046639-29056225	0	+	29046639	29046639	8553170	7	208,214,183,147,159,76,51,	0,6280,6773,7905,8423,9173,9535,
#Partially deleted in new
chr17	29051955	29053660	chr17:29051955-29053660	0	+	29051955	29051955	8553170	3	56,214,248,	0,964,1457,
#Boundary problem: need 42, got 0, diff 42, mapped 0.0
chr17	29071123	29180412	chr17:29071123-29180412	3	-	29074769	29166940	789624	42	3791,123,45,140,186,138,84,117,114,147,105,111,201,124,155,128,112,120,90,144,129,66,110,244,187,160,142,87,193,91,177,12,145,64,101,143,214,177,107,88,1080,100,	0,11192,14480,15314,15812,18837,19408,19686,21219,21731,22199,22856,23526,23812,25637,26099,26664,26981,27232,27702,28510,32475,35956,38734,39312,40300,40598,42887,43783,44227,44540,45320,46921,47253,48211,49492,49874,50423,50727,51042,94818,109189,
#Partially deleted in new
chr17	29073516	29091519	chr17:29073516-29091519	0	-	29073516	29073516	8553170	8	1398,123,140,186,138,84,117,481,	0,8799,12921,13419,16444,17015,17293,17522,
#Partially deleted in new
chr17	29073518	29180364	chr17:29073518-29180364	1	-	29074769	29166940	789624	41	1396,123,140,186,138,84,117,114,147,105,111,201,124,155,128,112,120,90,144,129,66,110,244,187,160,142,87,193,91,177,12,145,64,101,143,214,177,107,88,1080,52,	0,8797,12919,13417,16442,17013,17291,18824,19336,19804,20461,21131,21417,23242,23704,24269,24586,24837,25307,26115,30080,33561,36339,36917,37905,38203,40492,41388,41832,42145,42925,44526,44858,45816,47097,47479,48028,48332,48647,92423,106794,
#Partially deleted in new
chr17	29073518	29176752	chr17:29073518-29176752	1	-	29074769	29166940	789624	40	1396,123,140,186,138,84,117,114,147,105,201,124,155,128,112,120,90,144,129,66,110,244,187,160,142,87,193,91,177,12,145,64,101,143,214,177,107,88,1080,181,	0,8797,12919,13417,16442,17013,17291,18824,19336,19804,21131,21417,23242,23704,24269,24586,24837,25307,26115,30080,33561,36339,36917,37905,38203,40492,41388,41832,42145,42925,44526,44858,45816,47097,47479,48028,48332,48647,92423,103053,
#Partially deleted in new
chr17	29073518	29180364	chr17:29073518-29180364	1	-	29074769	29166940	789624	41	1396,123,140,186,138,84,117,114,147,105,111,201,124,155,128,112,120,90,144,129,66,110,244,187,160,142,87,193,91,177,10,144,64,101,143,214,177,107,88,1080,52,	0,8797,12919,13417,16442,17013,17291,18824,19336,19804,20461,21131,21417,23242,23704,24269,24586,24837,25307,26115,30080,33561,36339,36917,37905,38203,40492,41388,41832,42145,44512,44527,44858,45816,47097,47479,48028,48332,48647,92423,106794,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	29073520	29078857	chr17:29073520-29078857	3	-	29073851	29074199	789624	1	5337,	0,
#Partially deleted in new
chr17	29073520	29140379	chr17:29073520-29140379	0	-	29137042	29140379	789624	41	1394,123,140,186,138,84,117,114,147,105,111,201,124,155,128,112,120,90,144,129,66,110,244,187,160,142,87,193,91,177,12,145,64,101,143,214,177,107,88,69,40,	0,8795,12917,13415,16440,17011,17289,18822,19334,19802,20459,21129,21415,23240,23702,24267,24584,24835,25305,26113,30078,33559,36337,36915,37903,38201,40490,41386,41830,42143,42923,44524,44856,45814,47095,47477,48026,48330,48645,63495,66819,
#Partially deleted in new
chr17	29074480	29091849	chr17:29074480-29091849	0	-	29074480	29074480	8553170	8	434,123,140,186,138,84,117,220,	0,7835,11957,12455,15480,16051,16329,17149,
#Partially deleted in new
chr17	29074747	29082438	chr17:29074747-29082438	0	-	29079730	29082438	789624	3	167,1274,123,	0,4979,7568,
#Partially deleted in new
chr17	29074828	29086801	chr17:29074828-29086801	0	-	29074828	29074828	8553170	3	86,123,364,	0,7487,11609,
#Partially deleted in new
chr17	29074858	29090160	chr17:29074858-29090160	0	-	29074858	29074858	8553170	4	56,123,186,200,	0,7457,12077,15102,
#Partially deleted in new
chr17	29086459	29090835	chr17:29086459-29090835	0	-	29086459	29086459	8553170	5	165,186,138,84,26,	0,476,3501,4072,4350,
#Partially deleted in new
chr17	29086571	29091093	chr17:29086571-29091093	0	-	29086571	29086571	8553170	5	6,186,138,84,284,	0,364,3389,3960,4238,
#Deleted in new
chr17	29093980	29097880	chr17:29093980-29097880	0	-	29093980	29093980	8553170	5	110,201,124,590,93,	0,669,955,2780,3807,
#Deleted in new
chr17	29094242	29097353	chr17:29094242-29097353	0	-	29094242	29094242	8553170	2	89,453,	0,2658,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	29098370	29107667	chr17:29098370-29107667	0	-	29098370	29098370	8553170	5	75,144,129,66,588,	0,455,1263,5228,8709,
#Deleted in new
chr17	29111785	29114268	chr17:29111785-29114268	0	-	29111785	29111785	8553170	2	78,258,	0,2225,
#Partially deleted in new
chr17	29115352	29120675	chr17:29115352-29120675	0	-	29118134	29120675	789624	6	89,177,159,64,101,60,	0,311,2678,3024,3982,5263,
#Partially deleted in new
chr17	29121029	29140422	chr17:29121029-29140422	0	-	29121029	29121029	8553170	5	182,177,107,88,83,	0,517,821,1136,19310,
#Partially deleted in new
chr17	29121109	29140418	chr17:29121109-29140418	0	-	29121109	29140345	789624	6	102,177,107,88,36,79,	0,437,741,1056,3543,19230,
#Partially deleted in new
chr17	29121546	29140389	chr17:29121546-29140389	0	-	29121546	29121546	8553170	3	411,88,50,	0,619,18793,
#Partially deleted in new
chr17	29121850	29165511	chr17:29121850-29165511	0	-	29121850	29121850	8553170	3	107,88,124,	0,315,43537,
#Partially deleted in new
chr17	29121852	29127992	chr17:29121852-29127992	0	-	29121852	29121852	8553170	3	105,88,141,	0,313,5999,
#Partially deleted in new
chr17	29121924	29140383	chr17:29121924-29140383	0	-	29121924	29133836	789624	8	33,88,36,75,693,53,146,44,	0,241,2728,3968,5927,9458,11869,18415,
#Partially deleted in new
chr17	29133760	29165481	chr17:29133760-29165481	0	-	29133760	29133760	8553170	3	98,69,94,	0,3255,31627,
#Partially deleted in new
chr17	29140482	29155489	chr17:29140482-29155489	3	+	29140482	29140482	8553170	2	44,279,	0,14728,
#Deleted in new
chr17	29197070	29197785	chr17:29197070-29197785	7	-	29197070	29197070	16724991	1	715,	0,
#Partially deleted in new
chr17	29203425	29204474	chr17:29203425-29204474	7	-	29203425	29203425	16724991	1	1049,	0,
#Partially deleted in new
chr17	29246862	29254483	chr17:29246862-29254483	3	+	29246863	29254349	789624	6	32,65,119,142,143,282,	0,2279,3319,5201,6777,7339,
#Partially deleted in new
chr17	29246873	29254494	chr17:29246873-29254494	0	+	29246873	29253661	789624	5	21,65,119,143,293,	0,2268,3308,6766,7328,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	29255835	29294118	chr17:29255835-29294118	3	-	29264538	29294059	789624	4	8756,33,1725,336,	0,11662,30156,37947,
#Partially deleted in new
chr17	29264398	29294115	chr17:29264398-29294115	1	-	29264538	29294059	789624	3	193,33,333,	0,3099,29384,
#Partially deleted in new
chr17	29340481	29340822	chr17:29340481-29340822	7	-	29340481	29340481	16724991	1	341,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	29352068	29404105	chr17:29352068-29404105	3	+	29352068	29352068	8553170	2	39,380,	0,51657,
#Partially deleted in new
chr17	29369716	29390777	chr17:29369716-29390777	3	-	29369716	29369716	8553170	2	589,173,	0,20888,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	29388559	29388683	chr17:29388559-29388683	3	+	29388559	29388559	8553170	1	124,	0,
#Partially deleted in new
chr17	29390463	29475703	chr17:29390463-29475703	0	+	29451548	29475703	789624	5	125,69,226,72,34,	0,492,60991,76681,85206,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr17	29390599	29551904	chr17:29390599-29551904	3	+	29451548	29543022	789624	20	425,226,72,102,46,97,114,92,94,82,168,204,135,237,129,204,240,213,183,9344,	0,60855,76545,85070,87061,87651,89768,91597,99064,101184,104960,107718,111989,117296,120264,126853,131680,139807,143518,151961,
#Deleted in new
chr17	29390661	29390730	chr17:29390661-29390730	3	+	29390661	29390661	5263520	1	69,	0,
#Partially deleted in new
chr17	29390924	29451707	chr17:29390924-29451707	0	+	29390924	29390924	8553170	2	100,253,	0,60530,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr17	29390930	29544340	chr17:29390930-29544340	1	+	29451548	29543022	789624	18	94,226,72,102,46,97,114,92,94,82,168,204,135,237,129,213,183,1780,	0,60524,76214,84739,86730,87320,89437,91266,98733,100853,104629,107387,111658,116965,119933,139476,143187,151630,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	29424761	29424867	chr17:29424761-29424867	3	-	29424761	29424761	8553170	1	106,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	29445299	29445400	chr17:29445299-29445400	3	-	29445299	29445299	8553170	1	101,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	29480070	29514997	chr17:29480070-29514997	0	+	29480070	29480070	8553170	9	411,92,94,82,168,204,135,237,4134,	0,2126,9593,11713,15489,18247,22518,27825,30793,
#Partially deleted in new
chr17	29522287	29530738	chr17:29522287-29530738	0	+	29522287	29522287	8553170	2	232,332,	0,8119,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	29560546	29567137	chr17:29560546-29567137	3	-	29562560	29566966	789624	2	2540,1052,	0,5539,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	29560546	29707090	chr17:29560546-29707090	3	+	29560546	29560546	8553170	2	153,34,	0,146510,
#Deleted in new
chr17	29566051	29568341	chr17:29566051-29568341	0	+	29566051	29566051	8553170	2	177,64,	0,2226,
#Deleted in new
chr17	29566300	29567491	chr17:29566300-29567491	0	+	29566300	29566300	8553170	2	288,131,	0,1060,
#Partially deleted in new
chr17	29567179	29571702	chr17:29567179-29571702	0	+	29569020	29571702	789624	5	232,271,69,42,112,	0,1098,1838,2138,4411,
#Partially deleted in new
chr17	29568026	29572259	chr17:29568026-29572259	0	+	29569020	29572259	789624	7	34,231,69,42,129,201,118,	0,251,991,1291,3564,3830,4115,
#Partially deleted in new
chr17	29568046	29572288	chr17:29568046-29572288	0	+	29569020	29572288	789624	6	462,69,42,129,201,147,	0,971,1271,3544,3810,4095,
#Partially deleted in new
chr17	29568055	29572229	chr17:29568055-29572229	0	+	29569020	29572229	789624	7	5,271,69,42,129,201,88,	0,222,962,1262,3535,3801,4086,
#Partially deleted in new
chr17	29568516	29572307	chr17:29568516-29572307	0	+	29568516	29571837	789624	6	32,69,42,129,226,166,	0,501,801,3074,3315,3625,
#Partially deleted in new
chr17	29568590	29572173	chr17:29568590-29572173	0	+	29569020	29572173	789624	5	496,42,129,201,32,	0,727,3000,3266,3551,
#Partially deleted in new
chr17	29568643	29573157	chr17:29568643-29573157	3	+	29568758	29572924	789624	7	187,69,42,129,201,556,346,	0,374,674,2947,3213,3498,4168,
#Deleted in new
chr17	29568759	29569392	chr17:29568759-29569392	0	+	29568759	29568759	8553170	2	71,375,	0,258,
#Deleted in new
chr17	29570688	29573156	chr17:29570688-29573156	0	+	29570688	29570688	8553170	1	2468,	0,
#Deleted in new
chr17	29572429	29573157	chr17:29572429-29573157	0	+	29572429	29573076	789624	2	236,184,	0,544,
#Partially deleted in new
chr17	29573468	29589627	chr17:29573468-29589627	3	-	29574701	29589378	789624	20	1446,64,183,74,87,54,231,153,134,112,98,73,49,43,95,218,106,113,134,301,	0,1610,1819,2161,2343,2609,2751,3053,3394,3667,4176,4830,5262,7869,8273,8458,9229,9456,10014,15858,
#Partially deleted in new
chr17	29573474	29589549	chr17:29573474-29589549	1	-	29574701	29589378	789624	21	1440,64,183,74,87,54,231,153,134,112,98,73,49,27,43,95,218,106,113,134,223,	0,1604,1813,2155,2337,2603,2745,3047,3388,3661,4170,4824,5256,5487,7863,8267,8452,9223,9450,10008,15852,
#Deleted in new
chr17	29573474	29579330	chr17:29573474-29579330	0	-	29573474	29573474	8553170	12	1440,64,416,87,54,231,153,134,112,98,73,600,	0,1604,1813,2337,2603,2745,3047,3388,3661,4170,4824,5256,
#Partially deleted in new
chr17	29574171	29589431	chr17:29574171-29589431	1	-	29574701	29589378	789624	21	743,64,183,74,18,54,231,153,134,112,98,73,49,27,43,95,218,106,113,134,105,	0,907,1116,1458,1640,1906,2048,2350,2691,2964,3473,4127,4559,4790,7166,7570,7755,8526,8753,9311,15155,
#Partially deleted in new
chr17	29574450	29589592	chr17:29574450-29589592	1	-	29574949	29589378	789624	20	511,64,183,74,87,54,231,153,134,112,98,73,49,43,95,218,106,113,134,266,	0,628,837,1179,1361,1627,1769,2071,2412,2685,3194,3848,4280,6887,7291,7476,8247,8474,9032,14876,
#Deleted in new
chr17	29574512	29576434	chr17:29574512-29576434	0	-	29575290	29576434	789624	5	402,64,183,54,215,	0,566,775,1565,1707,
#Deleted in new
chr17	29574985	29576131	chr17:29574985-29576131	0	-	29575006	29576131	789624	5	157,183,74,87,54,	0,302,644,826,1092,
#Deleted in new
chr17	29575814	29576971	chr17:29575814-29576971	0	-	29575814	29575814	8553170	3	84,597,109,	0,263,1048,
#Partially deleted in new
chr17	29576379	29581381	chr17:29576379-29581381	0	-	29576379	29581381	789624	8	71,153,134,64,98,73,49,44,	0,142,483,804,1265,1919,2351,4958,
#Partially deleted in new
chr17	29576887	29581479	chr17:29576887-29581479	0	-	29576887	29576887	8553170	7	109,112,98,73,49,27,142,	0,248,757,1411,1843,2074,4450,
#Partially deleted in new
chr17	29576887	29581472	chr17:29576887-29581472	0	-	29576887	29576887	8553170	6	109,112,98,73,49,135,	0,248,757,1411,1843,4450,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	29581046	29582902	chr17:29581046-29582902	0	-	29581046	29581046	8553170	4	334,95,218,205,	0,695,880,1651,
#Partially deleted in new
chr17	29582064	29594054	chr17:29582064-29594054	0	-	29582064	29594029	789624	5	80,106,113,134,113,	0,633,860,1418,11877,
#Partially deleted in new
chr17	29582082	29589596	chr17:29582082-29589596	0	-	29582082	29589378	789624	5	62,106,113,109,270,	0,615,842,1400,7244,
#Partially deleted in new
chr17	29582759	29583872	chr17:29582759-29583872	0	-	29582759	29583037	789624	3	44,113,390,	0,165,723,
#Partially deleted in new
chr17	29589768	29609122	chr17:29589768-29609122	0	+	29608215	29609122	789624	6	94,136,125,46,144,37,	0,17973,18217,18426,19082,19317,
#Partially deleted in new
chr17	29589782	29614761	chr17:29589782-29614761	0	+	29589782	29589782	8553170	14	80,258,46,144,190,67,82,65,131,158,153,164,77,1408,	0,17959,18412,19068,19303,19572,20902,21796,22093,22333,22619,22869,23104,23571,
#Deleted in new
chr17	29591702	29592241	chr17:29591702-29592241	3	-	29591702	29591702	8553170	2	231,47,	0,492,
#Partially deleted in new
chr17	29593467	29614761	chr17:29593467-29614761	3	+	29593621	29613582	789624	15	268,136,125,46,144,190,67,82,65,131,158,153,164,77,1408,	0,14274,14518,14727,15383,15618,15887,17217,18111,18408,18648,18934,19184,19419,19886,
#Partially deleted in new
chr17	29593467	29614761	chr17:29593467-29614761	0	+	29593621	29613582	789624	16	268,136,125,46,144,190,67,82,65,131,158,153,164,77,366,499,	0,14274,14518,14727,15383,15618,15887,17217,18111,18408,18648,18934,19184,19419,19886,20795,
#Partially deleted in new
chr17	29593467	29614760	chr17:29593467-29614760	1	+	29593621	29613582	789624	16	268,136,125,46,144,190,67,82,65,131,158,153,164,77,366,498,	0,14274,14518,14727,15383,15618,15887,17217,18111,18408,18648,18934,19184,19419,19886,20795,
#Partially deleted in new
chr17	29599382	29614760	chr17:29599382-29614760	0	+	29599382	29599382	8553170	15	66,258,46,144,190,67,82,65,131,158,153,164,77,366,498,	0,8359,8812,9468,9703,9972,11302,12196,12493,12733,13019,13269,13504,13971,14880,
#Partially deleted in new
chr17	29599411	29608956	chr17:29599411-29608956	0	+	29599411	29599411	8553170	4	37,369,46,106,	0,8330,8783,9439,
#Partially deleted in new
chr17	29608651	29610748	chr17:29608651-29610748	0	+	29608651	29608651	8553170	3	343,336,64,	0,434,2033,
#Deleted in new
chr17	29612463	29613174	chr17:29612463-29613174	0	+	29612463	29613018	789624	3	91,164,288,	0,188,423,
#Deleted in new
chr17	29614755	29621423	chr17:29614755-29621423	1	-	29615731	29621421	789624	10	1102,231,58,146,105,120,182,130,123,200,	0,1189,1523,1946,2182,2744,4034,4304,4895,6468,
#Deleted in new
chr17	29614755	29618117	chr17:29614755-29618117	0	-	29614755	29614755	8553170	7	1099,231,58,146,105,99,640,	0,1189,1523,1946,2182,2486,2722,
#Deleted in new
chr17	29614761	29622899	chr17:29614761-29622899	3	-	29615731	29621421	789624	11	1096,231,58,146,105,120,182,130,123,200,212,	0,1183,1517,1940,2176,2738,4028,4298,4889,6462,7926,
#Deleted in new
chr17	29614762	29622899	chr17:29614762-29622899	0	-	29614762	29614762	8553170	10	1092,231,58,146,1695,182,130,123,200,212,	0,1182,1516,1939,2175,4027,4297,4888,6461,7925,
#Deleted in new
chr17	29614764	29621500	chr17:29614764-29621500	1	-	29615731	29621421	789624	9	1093,231,58,146,105,182,130,123,277,	0,1180,1514,1937,2173,4025,4295,4886,6459,
#Deleted in new
chr17	29614977	29622842	chr17:29614977-29622842	0	-	29614977	29614977	8553170	8	877,231,58,146,105,1730,200,155,	0,967,1301,1724,1960,2264,6246,7710,
#Deleted in new
chr17	29614977	29617469	chr17:29614977-29617469	0	-	29614977	29614977	8553170	5	880,231,58,146,532,	0,967,1301,1724,1960,
#Deleted in new
chr17	29614982	29618117	chr17:29614982-29618117	0	-	29617322	29618117	789624	7	872,231,58,146,105,99,70,	0,962,1296,1719,1955,2259,3065,
#Deleted in new
chr17	29615731	29621421	chr17:29615731-29621421	1	-	29615731	29621421	789624	10	123,231,58,146,105,120,182,130,123,198,	0,213,547,970,1206,2316,3058,3328,3919,5492,
#Deleted in new
chr17	29616107	29622907	chr17:29616107-29622907	0	-	29616107	29616107	8553170	4	68,58,146,220,	0,171,594,6580,
#Deleted in new
chr17	29618826	29622896	chr17:29618826-29622896	0	-	29618826	29621421	789624	5	145,130,123,261,209,	0,233,824,2397,3861,
#Deleted in new
chr17	29618882	29622904	chr17:29618882-29622904	0	-	29618882	29619653	789624	4	89,130,123,217,	0,177,768,3805,
#Deleted in new
chr17	29621616	29622254	chr17:29621616-29622254	3	-	29621616	29621616	8553170	1	638,	0,
#Partially deleted in new
chr17	29625937	29930152	chr17:29625937-29930152	3	-	29630840	29930000	0	15	6994,835,201,147,47,129,94,195,66,69,122,65,104,44,215,	0,10030,22206,24716,29623,40929,41192,45997,50882,51735,58625,69521,77021,167956,304000,
#Deleted in new
chr17	29630601	29631484	chr17:29630601-29631484	0	-	29630744	29631484	789624	2	187,306,	0,577,
#Partially deleted in new
chr17	29630748	29930093	chr17:29630748-29930093	1	-	29630840	29930000	789624	16	2183,835,201,147,47,129,94,195,66,69,122,65,104,44,81,156,	0,5219,17395,19905,24812,36118,36381,41186,46071,46924,53814,64710,72210,163145,218100,299189,
#Partially deleted in new
chr17	29630799	29761417	chr17:29630799-29761417	1	-	29630840	29761277	8553170	14	2132,835,201,147,47,129,94,195,66,66,122,65,104,268,	0,5168,17344,19854,24761,36067,36330,41135,46020,46873,53763,64659,72159,130350,
#Partially deleted in new
chr17	29639626	29640825	chr17:29639626-29640825	3	+	29639626	29639626	8553170	2	105,165,	0,1034,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	29641610	29641702	chr17:29641610-29641702	3	-	29641610	29641610	8553170	1	92,	0,
#Deleted in new
chr17	29644795	29645847	chr17:29644795-29645847	3	-	29644795	29644795	8553170	1	1052,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	29647693	29930000	chr17:29647693-29930000	0	-	29647693	29647693	8553170	13	651,147,47,129,94,195,66,69,122,65,104,44,63,	0,2960,7867,19173,19436,24241,29126,29979,36869,47765,55265,146200,282244,
#Partially deleted in new
chr17	29673839	29761390	chr17:29673839-29761390	1	-	29674104	29761277	789624	7	320,66,69,122,65,104,241,	0,2980,3833,10723,21619,29119,87310,
#Partially deleted in new
chr17	29673900	29930173	chr17:29673900-29930173	0	-	29684622	29930000	789624	8	259,66,69,122,65,104,44,236,	0,2919,3772,10662,21558,29058,119993,256037,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	29675829	29930107	chr17:29675829-29930107	0	-	29675829	29675829	8553170	7	1056,69,122,65,104,44,170,	0,1843,8733,19629,27129,118064,254108,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	29677718	29839142	chr17:29677718-29839142	0	-	29677718	29838929	789624	6	23,122,65,104,44,216,	0,6844,17740,25240,116175,161208,
#Partially deleted in new
chr17	29716278	29716685	chr17:29716278-29716685	7	-	29716278	29716278	16724991	1	407,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	29761102	29787836	chr17:29761102-29787836	3	+	29761102	29761102	8553170	3	91,127,358,	0,19358,26376,
#Deleted in new
chr17	29775746	29776701	chr17:29775746-29776701	7	-	29775746	29775746	16724991	1	955,	0,
#Deleted in new
chr17	29777618	29777744	chr17:29777618-29777744	3	+	29777618	29777618	8553170	1	126,	0,
#Partially deleted in new
chr17	29793615	29930167	chr17:29793615-29930167	0	-	29793615	29793615	8553170	3	322,81,230,	0,55233,136322,
#Partially deleted in new
chr17	29855758	29856332	chr17:29855758-29856332	7	+	29855758	29855758	16724991	1	574,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	29863401	29866092	chr17:29863401-29866092	3	+	29863401	29863401	8553170	2	839,54,	0,2637,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	29883005	29883109	chr17:29883005-29883109	3	+	29883005	29883005	8553170	1	104,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	29925216	29930276	chr17:29925216-29930276	1	-	29925471	29930000	789624	3	339,103,118,	0,4721,4942,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	29925276	29930228	chr17:29925276-29930228	1	-	29925471	29930000	789624	2	279,291,	0,4661,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	29928281	29930062	chr17:29928281-29930062	1	-	29928518	29930000	789624	2	303,125,	0,1656,
#Partially deleted in new
chr17	29929199	29969078	chr17:29929199-29969078	0	+	29943627	29969078	789624	4	130,63,85,288,	0,13040,14365,39591,
#Partially deleted in new
chr17	29929855	29999976	chr17:29929855-29999976	0	+	29929855	29929855	8553170	6	113,63,85,157,55,71,	0,12384,13709,63309,66450,70050,
#Partially deleted in new
chr17	29941604	30108452	chr17:29941604-30108452	3	+	29941796	30108024	789624	23	234,63,85,577,157,49,71,156,100,894,78,93,215,157,290,170,229,153,104,254,287,97,619,	0,635,1960,27186,51560,54707,58301,92625,109513,111650,114283,114459,116071,117940,136610,138467,139148,141286,145458,148816,150266,151235,166229,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr17	29941667	30074630	chr17:29941667-30074630	0	+	29941796	30073126	789624	16	171,63,85,577,157,49,71,156,100,894,78,93,215,157,116,983,	0,572,1897,27123,51497,54644,58238,92562,109450,111587,114220,114396,116008,117877,131415,131980,
#Partially deleted in new
chr17	29943627	29999933	chr17:29943627-29999933	1	+	29943627	29999933	789624	4	22,69,49,28,	0,25163,52684,56278,
#Partially deleted in new
chr17	29969182	30108452	chr17:29969182-30108452	0	+	29969182	30108024	789624	18	185,157,49,71,156,100,894,78,93,290,170,229,153,104,254,287,97,619,	0,23982,27129,30723,65047,81935,84072,86705,86881,109032,110889,111570,113708,117880,121238,122688,123657,138651,
#Partially deleted in new
chr17	29969205	30108306	chr17:29969205-30108306	0	+	29969205	30108024	789624	12	162,157,49,71,156,100,894,78,93,215,157,473,	0,23959,27106,30700,65024,81912,84049,86682,86858,88470,90339,138628,
#Deleted in new
chr17	29972513	29973027	chr17:29972513-29973027	7	+	29972513	29972513	16724991	1	514,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	30031762	30053334	chr17:30031762-30053334	0	+	30031762	30031762	8553170	4	171,156,100,80,	0,2467,19355,21492,
#Partially deleted in new
chr17	30055894	30059883	chr17:30055894-30059883	0	+	30055894	30055894	8553170	4	71,93,215,339,	0,169,1781,3650,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	30059051	30059147	chr17:30059051-30059147	3	-	30059051	30059051	8553170	1	96,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	30059053	30059147	chr17:30059053-30059147	7	-	30059053	30059053	16724991	1	94,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	30059338	30065677	chr17:30059338-30065677	3	-	30059338	30059338	8553170	2	547,44,	0,6295,
#Partially deleted in new
chr17	30068631	30069631	chr17:30068631-30069631	7	+	30068631	30068631	16724991	1	1000,	0,
#Partially deleted in new
chr17	30087138	30092156	chr17:30087138-30092156	0	+	30087138	30087138	8553170	2	28,286,	0,4732,
#Partially deleted in new
chr17	30090365	30117497	chr17:30090365-30117497	3	-	30090365	30090365	8553170	2	279,106,	0,27026,
#Partially deleted in new
chr17	30115520	30185847	chr17:30115520-30185847	0	+	30115520	30115520	8553170	7	103,218,57,129,208,109,1233,	0,1125,57021,62550,63569,65387,69094,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	30116780	30186475	chr17:30116780-30186475	3	+	30116843	30185674	789624	7	83,94,57,129,208,109,1861,	0,1299,55761,61290,62309,64127,67834,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	30116780	30128163	chr17:30116780-30128163	1	+	30116843	30128023	789624	3	83,94,305,	0,1299,11078,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	30116806	30186474	chr17:30116806-30186474	1	+	30172589	30185674	789624	6	57,57,129,208,109,1860,	0,55735,61264,62283,64101,67808,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	30116818	30180934	chr17:30116818-30180934	0	+	30116818	30116818	8553170	6	45,96,57,129,208,27,	0,46248,55723,61252,62271,64089,
#Partially deleted in new
chr17	30116818	30179235	chr17:30116818-30179235	0	+	30116843	30168828	789624	6	45,94,112,57,129,146,	0,1261,51995,55723,61252,62271,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	30116826	30128236	chr17:30116826-30128236	1	+	30116843	30118154	789624	4	37,31,94,378,	0,475,1253,11032,
#Partially deleted in new
chr17	30116828	30185193	chr17:30116828-30185193	0	+	30116843	30118154	789624	8	35,31,94,57,129,208,109,579,	0,473,1251,55713,61242,62261,64079,67786,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	30116838	30150666	chr17:30116838-30150666	0	+	30116838	30116838	8553170	3	25,94,565,	0,1241,33263,
#Partially deleted in new
chr17	30116991	30179144	chr17:30116991-30179144	0	+	30172589	30179144	789624	4	341,57,129,55,	0,55550,61079,62098,
#Partially deleted in new
chr17	30117078	30117172	chr17:30117078-30117172	3	+	30117078	30117078	5263520	1	94,	0,
#Partially deleted in new
chr17	30117078	30117172	chr17:30117078-30117172	3	-	30117078	30117078	8553170	1	94,	0,
#Partially deleted in new
chr17	30117085	30117160	chr17:30117085-30117160	3	-	30117085	30117085	5263520	1	75,	0,
#Partially deleted in new
chr17	30117153	30172592	chr17:30117153-30172592	0	+	30117153	30117153	8553170	5	179,94,112,112,51,	0,926,50949,51660,55388,
#Partially deleted in new
chr17	30117171	30184630	chr17:30117171-30184630	0	+	30172589	30184630	789624	7	161,94,57,129,208,109,16,	0,908,55370,60899,61918,63736,67443,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	30117965	30179192	chr17:30117965-30179192	0	+	30117965	30117965	8553170	5	46,212,57,129,103,	0,36438,54576,60105,61124,
#Partially deleted in new
chr17	30118037	30179264	chr17:30118037-30179264	0	+	30172589	30179264	789624	4	136,57,129,175,	0,54504,60033,61052,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	30144061	30144790	chr17:30144061-30144790	3	-	30144061	30144061	8553170	2	85,275,	0,454,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	30194318	30236002	chr17:30194318-30236002	3	-	30198455	30221958	0	14	4212,168,101,100,132,113,128,104,135,139,220,135,466,390,	0,8853,13413,14824,16196,16993,18421,21292,21763,22847,23799,24478,27297,41294,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	30194320	30235968	chr17:30194320-30235968	1	-	30198455	30221958	0	15	4210,168,101,100,132,113,128,104,135,139,220,135,466,97,356,	0,8851,13411,14822,16194,16991,18419,21290,21761,22845,23797,24476,27295,28498,41292,
#Partially deleted in new
chr17	30197920	30211369	chr17:30197920-30211369	0	-	30207805	30211369	789624	5	610,168,101,132,58,	0,5251,9811,12594,13391,
#Partially deleted in new
chr17	30198475	30203682	chr17:30198475-30203682	0	-	30198475	30198475	8553170	2	55,511,	0,4696,
#Partially deleted in new
chr17	30198494	30235698	chr17:30198494-30235698	0	-	30198494	30221958	789624	15	36,168,101,100,132,113,128,104,135,139,220,135,466,97,86,	0,4677,9237,10648,12020,12817,14245,17116,17587,18671,19623,20302,23121,24324,37118,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	30204317	30206468	chr17:30204317-30206468	3	+	30204317	30204317	8553170	2	219,478,	0,1673,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	30238740	30252237	chr17:30238740-30252237	3	+	30238740	30238740	8553170	2	60,164,	0,13333,
#Deleted in new
chr17	30246756	30246820	chr17:30246756-30246820	3	-	30246756	30246756	8553170	1	64,	0,
#Partially deleted in new
chr17	30248194	30291994	chr17:30248194-30291994	3	-	30249016	30291819	0	12	974,70,118,68,159,156,93,89,142,110,198,188,	0,18690,23076,24366,24546,25847,37193,38619,39611,41178,43116,43612,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	30248204	30250283	chr17:30248204-30250283	0	-	30248204	30248204	8553170	1	2079,	0,
#Partially deleted in new
chr17	30248821	30291849	chr17:30248821-30291849	0	-	30287942	30291819	789624	11	347,70,118,68,159,156,93,89,142,198,43,	0,18063,22449,23739,23919,25220,36566,37992,38984,42489,42985,
#Partially deleted in new
chr17	30266878	30291904	chr17:30266878-30291904	0	-	30266878	30286837	789624	9	76,118,68,159,156,93,38,17,98,	0,4392,5682,5862,7163,18509,19935,24613,24928,
#Partially deleted in new
chr17	30266884	30271493	chr17:30266884-30271493	0	-	30266884	30266884	8553170	2	70,223,	0,4386,
#Partially deleted in new
chr17	30271268	30287914	chr17:30271268-30287914	0	-	30271268	30287914	789624	7	120,68,149,160,93,89,109,	0,1292,1472,2769,14119,15545,16537,
#Deleted in new
chr17	30272257	30273130	chr17:30272257-30273130	0	-	30272257	30272257	8553170	2	371,390,	0,483,
#Partially deleted in new
chr17	30272740	30291667	chr17:30272740-30291667	0	-	30272740	30291601	789624	8	149,160,93,89,142,110,198,79,	0,1297,12647,14073,15065,16632,18570,18848,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	30273277	30285506	chr17:30273277-30285506	0	-	30273277	30273277	8553170	3	202,156,119,	0,764,12110,
#Partially deleted in new
chr17	30273764	30285539	chr17:30273764-30285539	0	-	30273764	30273764	8553170	2	433,152,	0,11623,
#Partially deleted in new
chr17	30287823	30292042	chr17:30287823-30292042	0	-	30287823	30289450	789624	4	124,110,198,129,	0,1549,3487,4090,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	30288070	30288177	chr17:30288070-30288177	3	-	30288070	30288070	8553170	1	107,	0,
#Deleted in new
chr17	30289413	30291994	chr17:30289413-30291994	0	-	30291239	30291819	789624	3	69,329,188,	0,1766,2393,
#Deleted in new
chr17	30290989	30292056	chr17:30290989-30292056	0	-	30290989	30290989	8553170	2	519,250,	0,817,
#Partially deleted in new
chr17	30316332	30334059	chr17:30316332-30334059	1	-	30317216	30332133	789624	6	358,41,279,279,107,60,	0,860,8483,12918,15719,17667,
#Partially deleted in new
chr17	30316347	30334047	chr17:30316347-30334047	3	-	30316686	30332133	789624	7	343,41,104,279,279,107,48,	0,845,2462,8468,12903,15704,17652,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	30344502	30344604	chr17:30344502-30344604	3	-	30344502	30344502	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	30360462	30360566	chr17:30360462-30360566	3	+	30360462	30360462	8553170	1	104,	0,
#Partially deleted in new
chr17	30378904	30469989	chr17:30378904-30469989	3	+	30378980	30464814	0	21	822,248,143,170,350,192,168,110,103,143,170,330,196,136,132,96,65,132,186,100,5402,	0,6084,41936,42759,43769,44601,48486,52867,60070,63403,64897,66786,70648,72806,76434,77351,77557,82275,82972,83465,85683,
#Partially deleted in new
chr17	30379615	30385292	chr17:30379615-30385292	0	+	30379615	30379615	8553170	2	111,304,	0,5373,
#Partially deleted in new
chr17	30380235	30465017	chr17:30380235-30465017	1	+	30380637	30464814	0	21	407,248,143,170,350,192,168,110,103,143,170,330,196,136,132,96,65,132,186,100,430,	0,4753,40605,41428,42438,43270,47155,51536,58739,62072,63566,65455,69317,71475,75103,76020,76226,80944,81641,82134,84352,
#Partially deleted in new
chr17	30438984	30444144	chr17:30438984-30444144	0	+	30438984	30438984	8553170	3	93,143,343,	0,3323,4817,
#Partially deleted in new
chr17	30443801	30466423	chr17:30443801-30466423	0	+	30443801	30466298	789624	4	170,330,3,177,	0,1889,3760,22445,
#Partially deleted in new
chr17	30445690	30451737	chr17:30445690-30451737	0	+	30445690	30445690	8553170	2	330,27,	0,6020,
#Partially deleted in new
chr17	30449672	30456351	chr17:30449672-30456351	0	+	30449672	30451801	789624	4	76,90,132,96,	0,2084,5666,6583,
#Partially deleted in new
chr17	30451809	30464947	chr17:30451809-30464947	0	+	30451809	30462406	789624	5	37,132,69,74,360,	0,3529,4446,10586,12778,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	30454020	30456863	chr17:30454020-30456863	0	+	30454020	30454020	8553170	2	2331,402,	0,2441,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	30477361	30527592	chr17:30477361-30527592	3	+	30477433	30522378	789624	9	103,121,88,108,92,75,30,83,5339,	0,3781,6852,7301,12764,15317,33518,42577,44892,
#Partially deleted in new
chr17	30477376	30522805	chr17:30477376-30522805	1	+	30477433	30522378	789624	9	88,115,88,108,92,75,30,83,552,	0,3766,6837,7286,12749,15302,33503,42562,44877,
#Partially deleted in new
chr17	30477416	30490350	chr17:30477416-30490350	0	+	30477416	30477416	8553170	5	48,115,88,108,225,	0,3726,6797,7246,12709,
#Partially deleted in new
chr17	30477419	30520432	chr17:30477419-30520432	0	+	30477433	30495441	789624	9	45,115,88,108,92,75,157,30,494,	0,3723,6794,7243,12706,15259,18006,33460,42519,
#Partially deleted in new
chr17	30477422	30522609	chr17:30477422-30522609	1	+	30484256	30522378	789624	9	64,115,88,108,92,75,30,83,356,	0,3720,6791,7240,12703,15256,33457,42516,44831,
#Partially deleted in new
chr17	30477422	30485134	chr17:30477422-30485134	0	+	30477422	30477422	8553170	4	42,121,88,472,	0,3720,6791,7240,
#Partially deleted in new
chr17	30477422	30490191	chr17:30477422-30490191	0	+	30477433	30482993	789624	6	42,121,157,88,108,66,	0,3720,5477,6791,7240,12703,
#Partially deleted in new
chr17	30477426	30522416	chr17:30477426-30522416	1	+	30477433	30522378	789624	8	38,121,88,108,92,63,83,163,	0,3716,6787,7236,12699,15264,42512,44827,
#Partially deleted in new
chr17	30477441	30522558	chr17:30477441-30522558	0	+	30477441	30522378	789624	9	45,121,88,108,92,75,30,83,305,	0,3701,6772,7221,12684,15237,33438,42497,44812,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	30478494	30481342	chr17:30478494-30481342	0	+	30478494	30478494	8553170	2	1679,487,	0,2361,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	30510592	30522593	chr17:30510592-30522593	0	+	30510592	30510592	8553170	3	317,83,340,	0,9346,11661,
#Partially deleted in new
chr17	30519698	30522609	chr17:30519698-30522609	0	+	30519698	30519698	8553170	2	323,356,	0,2555,
#Partially deleted in new
chr17	30529687	30542416	chr17:30529687-30542416	7	+	30529687	30529687	16724991	9	78,144,164,161,136,128,76,168,174,	0,620,1430,4997,5405,5680,12071,12276,12555,
#Deleted in new
chr17	30550492	30551189	chr17:30550492-30551189	3	-	30550492	30550492	8553170	2	153,127,	0,570,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	30551192	30551802	chr17:30551192-30551802	3	+	30551192	30551192	8553170	1	610,	0,
#Partially deleted in new
chr17	30553501	30562917	chr17:30553501-30562917	4	+	30553501	30553501	16724991	13	36,83,33,81,108,110,49,165,95,66,100,78,75,	0,193,1896,2398,2933,3371,4730,5296,6130,6615,7115,7585,9341,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	30557111	30563493	chr17:30557111-30563493	0	+	30557111	30557111	8553170	6	1806,703,66,100,49,294,	0,1912,3005,3505,5757,6088,
#Deleted in new
chr17	30557731	30558502	chr17:30557731-30558502	3	-	30557731	30557731	8553170	1	771,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	30559565	30563489	chr17:30559565-30563489	3	+	30559714	30563425	789624	5	161,66,100,49,290,	0,551,1051,3303,3634,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	30559565	30563475	chr17:30559565-30563475	0	+	30559565	30559565	8553170	2	1151,276,	0,3634,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	30559565	30563474	chr17:30559565-30563474	0	+	30559565	30559565	8553170	4	161,66,100,275,	0,551,1051,3634,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	30559565	30563475	chr17:30559565-30563475	0	+	30559565	30559565	8553170	5	161,66,100,49,276,	0,551,1051,3303,3634,
#Duplicated in new
chr17	30564056	30565576	chr17:30564056-30565576	3	-	30564056	30564056	8553170	1	1520,	0,
#Partially deleted in new
chr17	30567699	30571748	chr17:30567699-30571748	7	-	30567699	30567699	16724991	7	83,221,126,162,157,83,430,	0,186,493,1115,1889,2481,3619,
#Partially deleted in new
chr17	30573470	30574252	chr17:30573470-30574252	0	-	30573470	30573470	8553170	2	307,317,	0,465,
#Partially deleted in new
chr17	30573471	30577000	chr17:30573471-30577000	3	-	30573471	30573471	8553170	3	306,50,995,	0,464,2534,
#Partially deleted in new
chr17	30573472	30574420	chr17:30573472-30574420	0	-	30573472	30573472	8553170	3	305,50,206,	0,463,742,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	30576463	30579682	chr17:30576463-30579682	1	+	30576463	30576463	8553170	1	3219,	0,
#Partially deleted in new
chr17	30576507	30634323	chr17:30576507-30634323	0	+	30576507	30576507	789624	9	154,75,114,133,54,85,173,293,330,	0,23396,31044,31922,34381,39388,55247,56590,57486,
#Partially deleted in new
chr17	30600795	30615980	chr17:30600795-30615980	5	+	30600795	30600795	16724991	5	121,177,133,54,85,	0,856,7634,10093,15100,
#Partially deleted in new
chr17	30600864	30615980	chr17:30600864-30615980	7	+	30600864	30600864	16724991	5	52,157,133,54,85,	0,802,7565,10024,15031,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	30607565	30672789	chr17:30607565-30672789	2	+	30607565	30607565	8553170	5	100,133,54,90,327,	0,864,3323,40801,64897,
#Partially deleted in new
chr17	30607645	30634162	chr17:30607645-30634162	0	+	30607645	30607645	8553170	6	20,133,49,141,293,169,	0,784,3248,24109,25452,26348,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	30607657	30635466	chr17:30607657-30635466	0	+	30607657	30607657	8553170	5	8,133,54,293,1473,	0,772,3231,25440,26336,
#Deleted in new
chr17	30617679	30617790	chr17:30617679-30617790	7	-	30617679	30617679	16724991	1	111,	0,
#Deleted in new
chr17	30624412	30625494	chr17:30624412-30625494	7	+	30624412	30624412	16724991	1	1082,	0,
#Partially deleted in new
chr17	30629679	30637302	chr17:30629679-30637302	7	+	30629679	30629679	16724991	5	115,141,293,105,60,	0,2075,3418,4314,7563,
#Partially deleted in new
chr17	30631754	30634170	chr17:30631754-30634170	4	+	30631754	30631754	16724991	3	345,293,177,	0,1343,2239,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	30632121	30637466	chr17:30632121-30637466	5	+	30632121	30632121	16724991	2	1269,3473,	0,1872,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	30702503	30702775	chr17:30702503-30702775	3	-	30702503	30702503	8553170	1	272,	0,
#Partially deleted in new
chr17	30709298	30770034	chr17:30709298-30770034	5	+	30709298	30709298	16724991	6	513,69,86,34,64,163,	0,34002,57204,59535,59702,60573,
#Partially deleted in new
chr17	30709607	30768876	chr17:30709607-30768876	4	+	30709607	30709607	16724991	7	204,47,65,69,49,86,43,	0,25289,25425,33693,49883,56895,59226,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	30726304	30727564	chr17:30726304-30727564	3	-	30726304	30726304	8553170	2	359,101,	0,1159,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	30729468	30730391	chr17:30729468-30730391	3	+	30729468	30729468	8553170	2	759,30,	0,893,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	30731705	30758335	chr17:30731705-30758335	4	+	30731705	30731705	16724991	6	418,123,47,65,69,164,	0,780,3191,3327,11595,26466,
#Partially deleted in new
chr17	30731885	30776402	chr17:30731885-30776402	5	+	30731885	30731885	16724991	9	238,47,65,69,49,86,231,94,106,	0,3011,3147,11415,27605,34617,36948,37986,44411,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	30734062	30770050	chr17:30734062-30770050	6	+	30734062	30734062	16724991	7	881,65,69,49,86,231,179,	0,970,9238,25428,32440,34771,35809,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	30738181	30740275	chr17:30738181-30740275	3	+	30738181	30738181	8553170	1	2094,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	30769387	30784413	chr17:30769387-30784413	0	-	30769387	30769387	8553170	4	71,91,253,107,	0,4019,4704,14919,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	30781492	30782221	chr17:30781492-30782221	3	-	30781492	30781492	8553170	2	78,230,	0,499,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	30782683	30824776	chr17:30782683-30824776	3	-	30784186	30824651	789624	8	1760,113,133,223,178,88,208,254,	0,3235,9756,10766,13476,14627,21217,41839,
#Partially deleted in new
chr17	30783935	30824671	chr17:30783935-30824671	0	-	30796263	30824651	789624	7	508,113,133,223,178,88,149,	0,1983,8504,9514,12224,13375,40587,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	30784645	30790908	chr17:30784645-30790908	5	+	30784645	30784645	16724991	3	247,223,271,	0,2793,5992,
#Deleted in new
chr17	30792371	30792833	chr17:30792371-30792833	3	+	30792371	30792371	8553170	1	462,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	30803653	30804077	chr17:30803653-30804077	3	+	30803653	30803653	8553170	1	424,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	30803926	30809986	chr17:30803926-30809986	0	-	30803926	30803926	8553170	2	182,412,	0,5648,
#Deleted in new
chr17	30830900	30831318	chr17:30830900-30831318	7	+	30830900	30830900	16724991	1	418,	0,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr17	30831969	30895869	chr17:30831969-30895869	3	+	30832347	30894913	789624	23	444,1901,109,165,127,82,185,158,163,180,97,80,143,151,177,134,94,65,181,182,857,159,1035,	0,2178,5236,8647,11943,12865,23173,24985,26191,28463,33734,36363,37278,37526,44404,45446,46033,47453,55222,60637,61324,62594,62865,
#Partially deleted in new
chr17	30831969	30876439	chr17:30831969-30876439	0	+	30832347	30876439	789624	15	444,1901,109,165,127,82,185,158,163,180,97,80,143,151,66,	0,2178,5236,8647,11943,12865,23173,24985,26191,28463,33734,36363,37278,37526,44404,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	30834324	30863028	chr17:30834324-30863028	3	-	30834324	30834324	8553170	2	305,333,	0,28371,
#Partially deleted in new
chr17	30835208	30869852	chr17:30835208-30869852	0	+	30835208	30835208	8553170	13	840,109,165,127,82,185,158,163,180,97,80,143,357,	0,1997,5408,8704,9626,19934,21746,22952,25224,30495,33124,34039,34287,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	30861842	30861938	chr17:30861842-30861938	3	+	30861842	30861842	8553170	1	96,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	30863920	30864940	chr17:30863920-30864940	3	-	30863920	30863920	8553170	2	210,621,	0,399,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	30897335	30899115	chr17:30897335-30899115	0	-	30897335	30897335	8553170	2	425,208,	0,1572,
#Partially deleted in new
chr17	30898982	30906820	chr17:30898982-30906820	3	-	30899168	30906198	0	4	624,150,464,653,	0,1430,5083,7185,
#Partially deleted in new
chr17	30898985	30906235	chr17:30898985-30906235	0	-	30900500	30906198	0	4	621,109,464,68,	0,1427,5080,7182,
#Partially deleted in new
chr17	30898985	30906235	chr17:30898985-30906235	1	-	30900376	30906198	789624	3	1577,464,68,	0,5080,7182,
#Deleted in new
chr17	30899109	30899651	chr17:30899109-30899651	3	+	30899109	30899109	8553170	1	542,	0,
#Partially deleted in new
chr17	30904038	30906235	chr17:30904038-30906235	0	-	30904038	30904038	8553170	2	491,68,	0,2129,
#Partially deleted in new
chr17	30906343	30921760	chr17:30906343-30921760	0	+	30906343	30906343	8553170	2	301,57,	0,15360,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	30921679	30959322	chr17:30921679-30959322	3	+	30922014	30957869	789624	11	429,131,92,80,113,147,84,63,78,229,1488,	0,1260,5147,10209,12505,23227,27607,31608,32798,34561,36155,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	30921679	30958739	chr17:30921679-30958739	0	+	30922014	30934188	789624	10	429,131,92,113,147,84,63,78,229,905,	0,1260,5147,12505,23227,27607,31608,32798,34561,36155,
#Partially deleted in new
chr17	30921916	30949338	chr17:30921916-30949338	0	+	30931937	30949338	789624	5	192,80,113,147,52,	0,9972,12268,22990,27370,
#Partially deleted in new
chr17	30921931	30958220	chr17:30921931-30958220	1	+	30922014	30957869	789624	11	177,131,110,80,113,147,84,63,78,229,386,	0,1008,4877,9957,12253,22975,27355,31356,32546,34309,35903,
#Partially deleted in new
chr17	30921934	30956442	chr17:30921934-30956442	0	+	30922014	30956442	789624	9	174,131,92,80,113,147,63,78,202,	0,1005,4892,9954,12250,22972,31353,32543,34306,
#Partially deleted in new
chr17	30921947	30949330	chr17:30921947-30949330	0	+	30922014	30931918	789624	6	161,131,80,113,147,44,	0,992,9941,12237,22959,27339,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	30945027	30958339	chr17:30945027-30958339	0	+	30945027	30957869	789624	6	26,84,63,78,151,505,	0,4259,8260,9450,11213,12807,
#Partially deleted in new
chr17	30945041	30956362	chr17:30945041-30956362	0	+	30945041	30956362	789624	4	12,84,78,122,	0,4245,9436,11199,
#Partially deleted in new
chr17	30954239	30956728	chr17:30954239-30956728	0	+	30954239	30954239	8553170	2	316,488,	0,2001,
#Partially deleted in new
chr17	30954253	30958141	chr17:30954253-30958141	0	+	30954253	30954253	8553170	3	302,229,307,	0,1987,3581,
#Partially deleted in new
chr17	30956279	30956961	chr17:30956279-30956961	3	-	30956279	30956279	8553170	2	325,220,	0,462,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	30959563	30959850	chr17:30959563-30959850	3	+	30959563	30959563	8553170	1	287,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	30964934	30965500	chr17:30964934-30965500	3	-	30964934	30964934	8553170	2	222,187,	0,379,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	30968784	30970307	chr17:30968784-30970307	0	+	30968784	30968784	8553170	2	551,30,	0,1493,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	30970200	30999911	chr17:30970200-30999911	3	+	30971073	30999191	789624	5	1245,144,163,90,1250,	0,14416,17743,27041,28461,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	30970983	30999370	chr17:30970983-30999370	1	+	30971073	30998688	789624	3	462,90,709,	0,26258,27678,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	30971022	30999909	chr17:30971022-30999909	1	+	30971073	30998688	789624	4	423,144,90,1248,	0,13594,26219,27639,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	30971059	30999911	chr17:30971059-30999911	1	+	30971073	30998688	789624	6	386,144,163,65,90,1250,	0,13557,16884,22780,26182,27602,
#Partially deleted in new
chr17	30971140	30997248	chr17:30971140-30997248	0	+	30971140	30997248	789624	3	305,163,7,	0,16803,26101,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	30971651	30973312	chr17:30971651-30973312	3	+	30971651	30971651	8553170	1	1661,	0,
#Partially deleted in new
chr17	30975386	30975954	chr17:30975386-30975954	7	+	30975386	30975386	16724991	1	568,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	30988076	30997528	chr17:30988076-30997528	0	+	30988076	30997528	789624	4	30,65,90,72,	0,5763,9165,9380,
#Deleted in new
chr17	31008153	31008319	chr17:31008153-31008319	7	-	31008153	31008153	16724991	1	166,	0,
#Partially deleted in new
chr17	31008496	31022341	chr17:31008496-31022341	5	+	31008496	31008496	16724991	2	307,432,	0,13413,
#Partially deleted in new
chr17	31008604	31045549	chr17:31008604-31045549	4	+	31008604	31008604	16724991	4	199,133,50,140,	0,13305,15772,36805,
#Partially deleted in new
chr17	31008673	31029471	chr17:31008673-31029471	4	+	31008673	31008673	16724991	6	130,36,109,133,50,83,	0,4247,8221,13236,15703,20715,
#Partially deleted in new
chr17	31008753	31031946	chr17:31008753-31031946	5	+	31008753	31008753	16724991	7	50,36,109,133,50,83,66,	0,4167,8141,13156,15623,20635,23127,
#Partially deleted in new
chr17	31024340	31034162	chr17:31024340-31034162	4	+	31024340	31024340	16724991	4	86,81,71,239,	0,8085,8954,9583,
#Partially deleted in new
chr17	31038574	31051026	chr17:31038574-31051026	5	-	31038574	31038574	16724991	6	80,61,72,72,543,1139,	0,730,3624,6635,8590,11313,
#Partially deleted in new
chr17	31041087	31047720	chr17:31041087-31047720	4	-	31041087	31041087	16724991	4	112,72,72,556,	0,1111,4122,6077,
#Partially deleted in new
chr17	31041970	31059121	chr17:31041970-31059121	7	-	31041970	31041970	16724991	3	300,72,193,	0,3239,16958,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	31045406	31093127	chr17:31045406-31093127	7	+	31045406	31045406	16724991	4	143,138,104,252,	0,26505,46197,47469,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	31090786	31095450	chr17:31090786-31095450	3	-	31090786	31090786	8553170	3	149,119,224,	0,2586,4440,
#Deleted in new
chr17	31094349	31094425	chr17:31094349-31094425	3	-	31094349	31094349	5263520	1	76,	0,
#Partially deleted in new
chr17	31094926	31377677	chr17:31094926-31377677	3	+	31095309	31374155	0	57	443,144,84,191,107,68,76,158,174,123,75,132,135,114,80,124,156,250,74,84,441,140,123,84,117,182,212,162,104,136,159,98,147,147,111,433,341,203,194,141,280,215,62,115,102,141,127,132,136,158,123,131,101,143,47,217,3665,	0,61056,64083,68259,74964,86495,86783,87581,105495,106110,106484,111313,119524,124078,126923,128517,130168,131508,132291,132596,134098,134908,135333,135915,137146,137773,138075,140684,140991,154057,163417,164105,165442,166784,170302,230893,232572,235369,239911,241406,241708,242441,242892,243098,243777,245578,248082,254193,255256,257330,261533,262033,262342,263553,264042,265560,279086,
#Partially deleted in new
chr17	31094926	31377677	chr17:31094926-31377677	1	+	31095309	31374155	0	58	443,144,84,191,107,68,76,158,174,123,75,132,135,114,80,124,156,250,74,84,441,140,123,84,117,182,212,162,104,136,63,159,98,147,147,111,433,341,203,194,141,280,215,62,115,102,141,127,132,136,158,123,131,101,143,47,217,3665,	0,61056,64083,68259,74964,86495,86783,87581,105495,106110,106484,111313,119524,124078,126923,128517,130168,131508,132291,132596,134098,134908,135333,135915,137146,137773,138075,140684,140991,154057,158011,163417,164105,165442,166784,170302,230893,232572,235369,239911,241406,241708,242441,242892,243098,243777,245578,248082,254193,255256,257330,261533,262033,262342,263553,264042,265560,279086,
#Partially deleted in new
chr17	31094926	31219359	chr17:31094926-31219359	1	+	31095309	31219133	0	14	443,144,84,191,107,68,76,158,174,123,75,132,135,355,	0,61056,64083,68259,74964,86495,86783,87581,105495,106110,106484,111313,119524,124078,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	31094976	31222764	chr17:31094976-31222764	1	+	31095309	31221990	0	15	393,144,84,191,107,68,76,158,174,123,75,132,135,114,915,	0,61006,64033,68209,74914,86445,86733,87531,105445,106060,106434,111263,119474,124028,126873,
#Partially deleted in new
chr17	31095207	31374287	chr17:31095207-31374287	0	+	31095207	31299606	789624	58	162,144,84,191,107,68,76,158,174,123,75,132,135,114,80,124,156,250,74,84,441,140,123,84,117,182,212,162,104,136,159,98,147,147,111,97,433,341,203,194,141,280,215,62,115,102,141,127,132,136,158,123,131,101,143,47,217,275,	0,60775,63802,67978,74683,86214,86502,87300,105214,105829,106203,111032,119243,123797,126642,128236,129887,131227,132010,132315,133817,134627,135052,135634,136865,137492,137794,140403,140710,153776,163136,163824,165161,166503,170021,204302,230612,232291,235088,239630,241125,241427,242160,242611,242817,243496,245297,247801,253912,254975,257049,261252,261752,262061,263272,263761,265279,278805,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	31133181	31138518	chr17:31133181-31138518	3	+	31133181	31133181	8553170	2	520,2260,	0,3077,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr17	31156040	31254292	chr17:31156040-31254292	0	+	31156040	31181434	789624	29	86,84,191,68,76,158,174,123,75,132,135,114,80,124,156,250,74,84,441,140,123,84,117,182,212,162,104,136,4338,	0,2969,7145,25381,25669,26467,44381,44996,45370,50199,58410,62964,65809,67403,69054,70394,71177,71482,72984,73794,74219,74801,76032,76659,76961,79570,79877,92943,93914,
#Partially deleted in new
chr17	31159064	31183472	chr17:31159064-31183472	1	+	31163210	31182899	789624	5	29,191,68,76,965,	0,4121,22357,22645,23443,
#Partially deleted in new
chr17	31200535	31374433	chr17:31200535-31374433	0	+	31200535	31374155	789624	50	60,123,75,132,135,114,80,124,156,250,74,84,441,140,123,84,117,182,212,162,104,136,159,98,147,147,111,433,341,203,194,141,280,215,62,115,102,141,127,132,136,158,123,131,101,143,47,217,54,421,	0,501,875,5704,13915,18469,21314,22908,24559,25899,26682,26987,28489,29299,29724,30306,31537,32164,32466,35075,35382,48448,57808,58496,59833,61175,64693,125284,126963,129760,134302,135797,136099,136832,137283,137489,138168,139969,142473,148584,149647,151721,155924,156424,156733,157944,158433,159951,166689,173477,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr17	31225082	31331904	chr17:31225082-31331904	0	+	31225082	31225082	8553170	21	168,250,74,84,950,123,84,117,182,212,162,104,136,159,98,147,147,111,433,341,1609,	0,1352,2135,2440,3942,5177,5759,6990,7617,7919,10528,10835,23901,33261,33949,35286,36628,40146,100737,102416,105213,
#Partially deleted in new
chr17	31233029	31261794	chr17:31233029-31261794	0	+	31233029	31257719	789624	10	184,162,104,136,63,40,159,98,147,84,	0,2581,2888,15954,19908,24657,25314,26002,27339,28681,
#Partially deleted in new
chr17	31233029	31261794	chr17:31233029-31261794	0	+	31233029	31257719	789624	9	184,162,104,136,40,159,98,147,84,	0,2581,2888,15954,24657,25314,26002,27339,28681,
#Deleted in new
chr17	31272012	31273622	chr17:31272012-31273622	0	-	31272012	31272012	8553170	2	753,46,	0,1564,
#Partially deleted in new
chr17	31272448	31297230	chr17:31272448-31297230	0	-	31272448	31272448	8553170	3	317,73,75,	0,5719,24707,
#Deleted in new
chr17	31294574	31297539	chr17:31294574-31297539	0	-	31294574	31294574	8553170	1	2965,	0,
#Deleted in new
chr17	31294646	31297411	chr17:31294646-31297411	3	-	31295008	31296331	789624	2	1691,256,	0,2509,
#Partially deleted in new
chr17	31303765	31314112	chr17:31303765-31314112	3	-	31304262	31305609	789624	2	1865,134,	0,10213,
#Partially deleted in new
chr17	31304233	31314105	chr17:31304233-31314105	1	-	31304262	31305609	789624	3	1397,73,127,	0,3653,9745,
#Partially deleted in new
chr17	31305212	31318831	chr17:31305212-31318831	3	-	31314006	31318785	789624	3	418,66,524,	0,8766,13095,
#Partially deleted in new
chr17	31305342	31318640	chr17:31305342-31318640	0	-	31314006	31318640	789624	4	288,73,66,333,	0,2544,8636,12965,
#Partially deleted in new
chr17	31305355	31318640	chr17:31305355-31318640	0	-	31305610	31318640	789624	2	275,333,	0,12952,
#Partially deleted in new
chr17	31305383	31318639	chr17:31305383-31318639	0	-	31314077	31318639	789624	5	247,73,132,95,332,	0,2503,8595,8987,12924,
#Deleted in new
chr17	31317559	31321749	chr17:31317559-31321749	3	-	31318302	31320431	789624	3	1464,141,255,	0,2813,3935,
#Deleted in new
chr17	31317559	31321032	chr17:31317559-31321032	1	-	31318302	31319013	789624	2	1464,76,	0,3397,
#Deleted in new
chr17	31317559	31321884	chr17:31317559-31321884	1	-	31318302	31319013	789624	2	1464,390,	0,3935,
#Partially deleted in new
chr17	31318412	31336473	chr17:31318412-31336473	0	+	31327666	31336473	789624	6	152,433,341,203,194,141,	0,7407,9086,11883,16425,17920,
#Partially deleted in new
chr17	31330328	31336873	chr17:31330328-31336873	0	+	31330328	31334844	789624	5	170,67,194,141,239,	0,4335,4509,6004,6306,
#Partially deleted in new
chr17	31337762	31343098	chr17:31337762-31343098	0	+	31337762	31337762	8553170	5	118,115,102,141,90,	0,262,941,2742,5246,
#Partially deleted in new
chr17	31337816	31381887	chr17:31337816-31381887	0	+	31337816	31378931	789624	17	64,138,102,141,127,132,136,158,123,131,101,143,47,217,117,136,15,	0,185,887,2688,5192,11303,12366,14440,18643,19143,19452,20663,21152,22670,36196,41071,44056,
#Partially deleted in new
chr17	31337816	31360597	chr17:31337816-31360597	0	+	31337816	31356478	789624	11	64,141,127,132,136,123,131,101,143,47,111,	0,2688,5192,11303,12366,18643,19143,19452,20663,21152,22670,
#Partially deleted in new
chr17	31340279	31349150	chr17:31340279-31349150	0	+	31340279	31340279	8553170	3	304,127,31,	0,2729,8840,
#Deleted in new
chr17	31345518	31346190	chr17:31345518-31346190	7	+	31345518	31345518	16724991	1	672,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	31355803	31361602	chr17:31355803-31361602	0	+	31355803	31355803	8553170	1	5799,	0,
#Partially deleted in new
chr17	31358547	31360956	chr17:31358547-31360956	0	+	31358547	31360711	789624	3	75,47,470,	0,421,1939,
#Partially deleted in new
chr17	31378647	31382116	chr17:31378647-31382116	0	+	31378647	31378647	8553170	2	376,244,	0,3225,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	31378890	31382106	chr17:31378890-31382106	0	+	31378890	31378931	789624	3	133,252,234,	0,215,2982,
#Partially deleted in new
chr17	31380140	31382116	chr17:31380140-31382116	0	+	31380140	31380140	8553170	2	87,244,	0,1732,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	31391623	31538217	chr17:31391623-31538217	3	+	31391852	31531732	789624	15	388,88,89,227,195,135,36,100,104,141,82,138,159,144,6602,	0,40189,42410,126027,129542,130291,130736,131888,132269,133466,136218,136782,136996,138702,139992,
#Deleted in new
chr17	31391934	31392658	chr17:31391934-31392658	0	+	31391934	31391934	8553170	2	77,376,	0,348,
#Partially deleted in new
chr17	31431558	31521223	chr17:31431558-31521223	0	+	31431665	31521223	789624	5	134,88,89,227,58,	0,254,2475,86092,89607,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	31465542	31465832	chr17:31465542-31465832	3	+	31465542	31465542	8553170	1	290,	0,
#Partially deleted in new
chr17	31487999	31531849	chr17:31487999-31531849	1	+	31488242	31531732	789624	13	273,227,195,135,36,100,104,141,82,138,159,144,234,	0,29651,33166,33915,34360,35512,35893,37090,39842,40406,40620,42326,43616,
#Partially deleted in new
chr17	31488107	31525116	chr17:31488107-31525116	0	+	31521936	31525116	789624	6	165,135,36,100,104,27,	0,33807,34252,35404,35785,36982,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	31488117	31517708	chr17:31488117-31517708	0	+	31488242	31509199	789624	3	155,405,58,	0,20959,29533,
#Partially deleted in new
chr17	31488191	31521184	chr17:31488191-31521184	0	+	31488242	31488395	789624	3	241,227,19,	0,29459,32974,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	31518431	31518729	chr17:31518431-31518729	3	+	31518431	31518431	8553170	1	298,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	31520905	31527593	chr17:31520905-31527593	0	+	31520905	31520905	8553170	3	455,135,5234,	0,1009,1454,
#Partially deleted in new
chr17	31521865	31527893	chr17:31521865-31527893	0	+	31521865	31521865	8553170	6	184,36,100,104,141,52,	0,494,1646,2027,3224,5976,
#Deleted in new
chr17	31530971	31531852	chr17:31530971-31531852	0	+	31530971	31530971	8553170	2	166,237,	0,644,
#Deleted in new
chr17	31533170	31533938	chr17:31533170-31533938	3	-	31533170	31533170	8553170	1	768,	0,
#Deleted in new
chr17	31534882	31534971	chr17:31534882-31534971	3	+	31534882	31534882	789624	1	89,	0,
#Partially deleted in new
chr17	31559995	31560083	chr17:31559995-31560083	3	+	31559995	31559995	5263520	1	88,	0,
#Partially deleted in new
chr17	31560131	31560573	chr17:31560131-31560573	3	+	31560131	31560131	8553170	1	442,	0,
#Partially deleted in new
chr17	31563767	31563894	chr17:31563767-31563894	3	-	31563767	31563767	8553170	1	127,	0,
#Partially deleted in new
chr17	31571141	31575659	chr17:31571141-31575659	3	+	31571141	31571141	8553170	3	220,90,149,	0,943,4369,
#Partially deleted in new
chr17	31575268	31575358	chr17:31575268-31575358	3	+	31575268	31575268	5263520	1	90,	0,
#Partially deleted in new
chr17	31575410	31575521	chr17:31575410-31575521	3	+	31575410	31575410	5263520	1	111,	0,
#Deleted in new
chr17	31709567	31709859	chr17:31709567-31709859	7	+	31709567	31709567	16724991	1	292,	0,
#Partially deleted in new
chr17	31713752	31713853	chr17:31713752-31713853	3	+	31713752	31713752	8553170	1	101,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	31759794	31761385	chr17:31759794-31761385	7	+	31759794	31759794	16724991	1	1591,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	31762439	31769048	chr17:31762439-31769048	3	+	31762439	31762439	8553170	2	463,42,	0,6567,
#Partially deleted in new
chr17	31830730	31831750	chr17:31830730-31831750	3	+	31830730	31830730	8553170	2	60,337,	0,683,
#Partially deleted in new
chr17	31851863	31859337	chr17:31851863-31859337	3	-	31852138	31859199	789624	4	445,219,67,237,	0,948,4935,7237,
#Partially deleted in new
chr17	31851870	31859074	chr17:31851870-31859074	1	-	31852138	31858820	789624	4	438,219,67,317,	0,941,4928,6887,
#Partially deleted in new
chr17	31851870	31859291	chr17:31851870-31859291	0	-	31856628	31859199	789624	5	438,219,147,67,191,	0,941,4694,4928,7230,
#Partially deleted in new
chr17	31852218	31859213	chr17:31852218-31859213	0	-	31852922	31859199	789624	3	90,219,113,	0,593,6882,
#Partially deleted in new
chr17	31852230	31858931	chr17:31852230-31858931	0	-	31852230	31856811	789624	4	78,219,67,107,	0,581,4568,6594,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr17	31860898	31901765	chr17:31860898-31901765	3	-	31863358	31901627	789624	19	2618,73,67,110,81,180,78,80,182,82,82,78,119,64,48,93,42,85,230,	0,4467,7147,12479,12774,14335,17351,17803,19674,23525,25081,26337,28386,31361,31848,33746,34071,38747,40637,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	31863173	31888221	chr17:31863173-31888221	0	-	31863173	31863173	8553170	12	343,73,67,110,81,180,78,80,182,82,82,986,	0,2192,4872,10204,10499,12060,15076,15528,17399,21250,22806,24062,
#Partially deleted in new
chr17	31863173	31868112	chr17:31863173-31868112	0	-	31863495	31868112	789624	2	343,67,	0,4872,
#Partially deleted in new
chr17	31863348	31873948	chr17:31863348-31873948	0	-	31863348	31863348	8553170	5	168,73,67,110,276,	0,2017,4697,10029,10324,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	31873183	31873844	chr17:31873183-31873844	0	-	31873183	31873183	8553170	2	304,172,	0,489,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	31873925	31886666	chr17:31873925-31886666	3	+	31873925	31873925	8553170	2	393,95,	0,12646,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	31880180	31901708	chr17:31880180-31901708	0	-	31880180	31880180	8553170	11	574,82,82,78,119,64,48,93,42,85,173,	0,4243,5799,7055,9104,12079,12566,14464,14789,19465,21355,
#Partially deleted in new
chr17	31892147	31901673	chr17:31892147-31901673	0	-	31892147	31892147	8553170	6	176,48,93,42,85,138,	0,599,2497,2822,7498,9388,
#Partially deleted in new
chr17	31937017	32001045	chr17:31937017-32001045	3	+	31937246	31999003	0	16	503,47,65,69,50,86,232,94,106,178,92,144,158,199,80,2388,	0,3268,3404,10599,29129,36128,38464,39503,45981,51302,56224,56847,57546,58546,59780,61640,
#Partially deleted in new
chr17	31937066	32000649	chr17:31937066-32000649	1	+	31937246	31999003	789624	15	454,47,65,50,86,232,94,106,178,92,144,158,199,80,1992,	0,3219,3355,29080,36079,38415,39454,45932,51253,56175,56798,57497,58497,59731,61591,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	31963804	31963933	chr17:31963804-31963933	7	-	31963804	31963804	16724991	1	129,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	31965694	31967589	chr17:31965694-31967589	0	+	31965694	31965694	8553170	1	1895,	0,
#Partially deleted in new
chr17	31994352	31999376	chr17:31994352-31999376	0	+	31994352	31994352	8553170	4	369,199,80,719,	0,1211,2445,4305,
#Deleted in new
chr17	32003109	32003326	chr17:32003109-32003326	5	-	32003109	32003109	16724991	1	217,	0,
#Partially deleted in new
chr17	32003202	32006688	chr17:32003202-32006688	7	-	32003202	32003202	16724991	2	123,82,	0,3404,
#Partially deleted in new
chr17	32007871	32021856	chr17:32007871-32021856	0	+	32007940	32021856	789624	2	261,464,	0,13521,
#Partially deleted in new
chr17	32007973	32021859	chr17:32007973-32021859	0	+	32021392	32021859	789624	3	159,107,467,	0,12723,13419,
#Partially deleted in new
chr17	32007987	32053486	chr17:32007987-32053486	1	+	32021392	32053328	789624	15	145,83,107,1433,72,72,72,81,72,75,119,141,293,105,221,	0,9984,12709,13405,16723,19781,22668,23390,26922,27577,37712,39773,41114,42015,45278,
#Partially deleted in new
chr17	32008035	32017220	chr17:32008035-32017220	0	+	32008035	32008035	8553170	2	97,296,	0,8889,
#Partially deleted in new
chr17	32021004	32053504	chr17:32021004-32053504	1	+	32021065	32053328	789624	12	1821,72,72,72,81,72,75,119,141,293,105,239,	0,3706,6764,9651,10373,13905,14560,24695,26756,28097,28998,32261,
#Partially deleted in new
chr17	32021096	32053360	chr17:32021096-32053360	0	+	32021110	32047764	789624	11	1729,72,72,72,81,72,75,141,293,105,95,	0,3614,6672,9559,10281,13813,14468,26664,28005,28906,32169,
#Partially deleted in new
chr17	32021096	32053360	chr17:32021096-32053360	1	+	32021110	32053328	789624	10	1729,72,72,72,75,119,141,293,105,95,	0,3614,6672,13813,14468,24603,26664,28005,28906,32169,
#Partially deleted in new
chr17	32021107	32035840	chr17:32021107-32035840	0	+	32021107	32021107	8553170	8	1718,72,72,72,81,89,72,276,	0,3603,6661,9548,10270,12869,13802,14457,
#Partially deleted in new
chr17	32021135	32053498	chr17:32021135-32053498	1	+	32021146	32053328	789624	12	1690,72,72,72,81,72,75,119,141,293,105,233,	0,3575,6633,9520,10242,13774,14429,24564,26625,27966,28867,32130,
#Partially deleted in new
chr17	32021141	32053504	chr17:32021141-32053504	3	+	32021146	32053328	789624	12	1684,72,72,72,81,72,75,119,141,293,105,239,	0,3569,6627,9514,10236,13768,14423,24558,26619,27960,28861,32124,
#Partially deleted in new
chr17	32022289	32028945	chr17:32022289-32028945	0	+	32022289	32022289	8553170	4	536,72,72,112,	0,2421,5479,6544,
#Deleted in new
chr17	32024468	32024583	chr17:32024468-32024583	7	-	32024468	32024468	16724991	1	115,	0,
#Partially deleted in new
chr17	32024735	32048029	chr17:32024735-32048029	0	+	32024735	32024735	8553170	5	47,72,75,119,269,	0,10174,10829,20964,23025,
#Partially deleted in new
chr17	32027789	32048021	chr17:32027789-32048021	0	+	32027789	32027789	8553170	7	51,72,81,72,75,119,261,	0,2866,3588,7120,7775,17910,19971,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	32031395	32036066	chr17:32031395-32036066	0	+	32031395	32031395	8553170	3	63,72,502,	0,3514,4169,
#Deleted in new
chr17	32039973	32040694	chr17:32039973-32040694	5	+	32039973	32039973	16724991	1	721,	0,
#Deleted in new
chr17	32040436	32041524	chr17:32040436-32041524	5	+	32040436	32040436	16724991	1	1088,	0,
#Deleted in new
chr17	32040883	32042828	chr17:32040883-32042828	7	+	32040883	32040883	16724991	1	1945,	0,
#Deleted in new
chr17	32045486	32048007	chr17:32045486-32048007	0	+	32045486	32045486	8553170	2	332,247,	0,2274,
#Partially deleted in new
chr17	32045536	32050006	chr17:32045536-32050006	0	+	32045536	32045536	8553170	4	282,141,293,4,	0,2224,3565,4466,
#Partially deleted in new
chr17	32047166	32053413	chr17:32047166-32053413	0	+	32047166	32047166	8553170	4	735,293,105,148,	0,1935,2836,6099,
#Partially deleted in new
chr17	32047760	32050332	chr17:32047760-32050332	0	+	32047760	32050278	789624	3	141,293,330,	0,1341,2242,
#Partially deleted in new
chr17	32048977	32050582	chr17:32048977-32050582	0	+	32048977	32048977	8553170	2	417,580,	0,1025,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	32051029	32053208	chr17:32051029-32053208	3	+	32051029	32051029	8553170	1	2179,	0,
#Partially deleted in new
chr17	32083178	32096989	chr17:32083178-32096989	7	+	32083178	32083178	16724991	3	144,140,147,	0,11883,13664,
#Partially deleted in new
chr17	32088159	32094933	chr17:32088159-32094933	7	-	32088159	32088159	16724991	4	81,70,76,72,	0,731,3613,6702,
#Partially deleted in new
chr17	32088160	32094932	chr17:32088160-32094932	5	-	32088160	32088160	16724991	4	80,70,76,71,	0,730,3612,6701,
#Deleted in new
chr17	32096843	32097065	chr17:32096843-32097065	5	+	32096843	32096843	16724991	1	222,	0,
#Partially deleted in new
chr17	32106329	32114125	chr17:32106329-32114125	7	-	32106329	32106329	16724991	3	154,247,46,	0,886,7750,
#Partially deleted in new
chr17	32106331	32114122	chr17:32106331-32114122	4	-	32106331	32106331	16724991	3	152,247,43,	0,884,7748,
#Deleted in new
chr17	32111561	32112590	chr17:32111561-32112590	7	-	32111561	32111561	16724991	1	1029,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	32127594	32128454	chr17:32127594-32128454	3	+	32127594	32127594	8553170	1	860,	0,
#Partially deleted in new
chr17	32141225	32143135	chr17:32141225-32143135	3	-	32141225	32141225	789624	2	1488,111,	0,1799,
#Partially deleted in new
chr17	32142453	32225770	chr17:32142453-32225770	1	+	32142692	32224733	0	19	276,59,82,44,54,53,109,102,99,109,121,85,146,101,131,84,120,203,1155,	0,28589,31377,32865,33508,33707,40303,40717,49747,50682,51533,56493,56951,58502,60316,61436,64456,65653,82162,
#Partially deleted in new
chr17	32142465	32225727	chr17:32142465-32225727	3	+	32142692	32224733	0	21	264,59,82,44,54,53,109,102,99,109,121,85,146,101,131,84,120,203,96,123,1112,	0,28577,31365,32853,33496,33695,40291,40705,49735,50670,51521,56481,56939,58490,60304,61424,64444,65641,66884,68650,82150,
#Partially deleted in new
chr17	32142474	32225727	chr17:32142474-32225727	0	+	32142692	32172996	789624	21	255,59,124,82,44,54,53,109,102,99,109,121,85,146,101,131,84,120,203,96,1112,	0,28568,30462,31356,32844,33487,33686,40282,40696,49726,50661,51512,56472,56930,58481,60295,61415,64435,65632,66875,82141,
#Partially deleted in new
chr17	32142536	32225113	chr17:32142536-32225113	1	+	32142692	32224733	0	20	193,59,82,44,54,53,109,102,99,109,121,85,146,101,131,84,120,203,123,498,	0,28506,31294,32782,33425,33624,40220,40634,49664,50599,51450,56410,56868,58419,60233,61353,64373,65570,68579,82079,
#Partially deleted in new
chr17	32142559	32225666	chr17:32142559-32225666	1	+	32171068	32224733	789624	19	170,55,82,44,54,53,109,102,99,109,121,85,146,101,131,84,120,203,1051,	0,28487,31271,32759,33402,33601,40197,40611,49641,50576,51427,56387,56845,58396,60210,61330,64350,65547,82056,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr17	32142567	32225503	chr17:32142567-32225503	0	+	32142692	32221064	0	21	162,59,82,44,54,53,109,102,99,109,121,85,146,101,131,84,120,203,123,138,888,	0,28475,31263,32751,33394,33593,40189,40603,49633,50568,51419,56379,56837,58388,60202,61322,64342,65539,68548,78481,82048,
#Partially deleted in new
chr17	32142629	32209738	chr17:32142629-32209738	1	+	32142692	32208313	0	18	100,59,82,44,54,53,109,102,99,109,121,85,146,101,131,84,120,1632,	0,28413,31201,32689,33332,33531,40127,40541,49571,50506,51357,56317,56775,58326,60140,61260,64280,65477,
#Partially deleted in new
chr17	32142672	32225503	chr17:32142672-32225503	0	+	32142692	32172996	789624	20	57,59,124,82,44,54,53,109,102,99,109,121,85,146,101,131,84,120,203,888,	0,28370,30264,31158,32646,33289,33488,40084,40498,49528,50463,51314,56274,56732,58283,60097,61217,64237,65434,81943,
#Partially deleted in new
chr17	32142676	32199504	chr17:32142676-32199504	0	+	32142676	32142676	8553170	6	53,99,109,121,85,100,	0,49524,50459,51310,56270,56728,
#Partially deleted in new
chr17	32142679	32225727	chr17:32142679-32225727	1	+	32142692	32224733	0	20	50,59,82,44,54,53,109,102,99,109,121,85,146,101,131,84,120,203,96,1112,	0,28363,31151,32639,33282,33481,40077,40491,49521,50456,51307,56267,56725,58276,60090,61210,64230,65427,66670,81936,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	32150432	32151504	chr17:32150432-32151504	7	-	32150432	32150432	16724991	2	582,367,	0,705,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	32159310	32160371	chr17:32159310-32160371	3	+	32159310	32159310	8553170	1	1061,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	32179359	32179866	chr17:32179359-32179866	0	-	32179359	32179359	8553170	1	507,	0,
#Partially deleted in new
chr17	32202823	32211195	chr17:32202823-32211195	0	+	32202823	32211195	789624	5	83,84,120,203,80,	0,1066,4086,5283,8292,
#Partially deleted in new
chr17	32203859	32207541	chr17:32203859-32207541	0	+	32203859	32203859	8553170	2	114,632,	0,3050,
#Partially deleted in new
chr17	32203936	32253374	chr17:32203936-32253374	0	+	32203936	32253127	789624	4	37,120,203,290,	0,2973,4170,49148,
#Partially deleted in new
chr17	32206924	32211435	chr17:32206924-32211435	0	+	32206924	32211278	789624	3	105,203,320,	0,1182,4191,
#Partially deleted in new
chr17	32206949	32224960	chr17:32206949-32224960	0	+	32206949	32207554	789624	4	80,52,203,345,	0,562,1157,17666,
#Partially deleted in new
chr17	32208301	32253374	chr17:32208301-32253374	0	+	32208301	32253127	789624	3	8,123,290,	0,2814,44783,
#Partially deleted in new
chr17	32209387	32242162	chr17:32209387-32242162	0	+	32209387	32209387	8553170	2	58,368,	0,32407,
#Partially deleted in new
chr17	32211115	32225727	chr17:32211115-32225727	0	+	32211115	32222850	789624	3	123,74,1112,	0,11713,13500,
#Deleted in new
chr17	32227889	32228108	chr17:32227889-32228108	7	-	32227889	32227889	16724991	1	219,	0,
#Partially deleted in new
chr17	32266175	32324661	chr17:32266175-32324661	3	+	32266189	32321229	789624	9	125,24,159,225,149,113,101,61,3704,	0,1726,18483,22616,28118,31916,39165,50056,54782,
#Partially deleted in new
chr17	32266175	32321363	chr17:32266175-32321363	0	+	32266189	32321363	789624	8	125,24,159,225,149,113,61,406,	0,1726,18483,22616,28118,31916,50056,54782,
#Partially deleted in new
chr17	32266175	32321362	chr17:32266175-32321362	0	+	32266189	32288252	789624	9	125,24,138,225,149,113,101,61,405,	0,1726,22056,22616,28118,31916,39165,50056,54782,
#Partially deleted in new
chr17	32266176	32321363	chr17:32266176-32321363	1	+	32266189	32321229	789624	8	124,159,225,149,113,101,61,406,	0,18482,22615,28117,31915,39164,50055,54781,
#Partially deleted in new
chr17	32267803	32324656	chr17:32267803-32324656	1	+	32288791	32321229	789624	7	122,225,149,113,101,61,3699,	0,20988,26490,30288,37537,48428,53154,
#Deleted in new
chr17	32280386	32280953	chr17:32280386-32280953	3	-	32280386	32280386	8553170	2	285,41,	0,526,
#Partially deleted in new
chr17	32284151	32316274	chr17:32284151-32316274	0	+	32284151	32284151	8553170	6	666,225,98,113,101,43,	0,4640,10193,13940,21189,32080,
#Partially deleted in new
chr17	32324430	32360700	chr17:32324430-32360700	3	+	32324430	32324430	8553170	5	95,50,127,139,103,	0,25846,27355,34072,36167,
#Partially deleted in new
chr17	32324477	32360665	chr17:32324477-32360665	0	+	32324477	32324477	8553170	4	48,174,139,68,	0,27261,34025,36120,
#Partially deleted in new
chr17	32324564	32335362	chr17:32324564-32335362	0	-	32324724	32335362	789624	4	210,137,65,40,	0,9904,10210,10758,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	32328440	32329395	chr17:32328440-32329395	3	+	32328440	32328440	8553170	2	219,52,	0,903,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	32328442	32342209	chr17:32328442-32342209	1	-	32331762	32342139	789624	10	3536,104,137,65,120,60,142,126,81,210,	0,4974,6026,6332,6880,9454,9767,11370,12761,13557,
#Partially deleted in new
chr17	32331361	32342189	chr17:32331361-32342189	3	-	32331762	32342139	789624	10	617,104,137,65,120,58,144,126,81,190,	0,2055,3107,3413,3961,6535,6846,8451,9842,10638,
#Partially deleted in new
chr17	32331595	32334543	chr17:32331595-32334543	0	-	32331907	32334543	789624	2	383,75,	0,2873,
#Partially deleted in new
chr17	32333457	32341952	chr17:32333457-32341952	0	-	32333457	32337908	789624	9	63,137,65,120,58,144,126,81,90,	0,1011,1317,1865,4439,4750,6355,7746,8405,
#Partially deleted in new
chr17	32334490	32350023	chr17:32334490-32350023	0	-	32334490	32342115	789624	9	115,65,120,58,144,126,81,122,82,	0,284,832,3406,3717,5322,6713,7509,15451,
#Partially deleted in new
chr17	32334537	32341871	chr17:32334537-32341871	0	-	32334537	32337908	789624	8	68,65,120,58,144,126,81,71,	0,237,785,3359,3670,5275,6666,7263,
#Partially deleted in new
chr17	32334650	32337941	chr17:32334650-32337941	0	-	32334650	32334650	8553170	3	189,120,45,	0,672,3246,
#Partially deleted in new
chr17	32334788	32342209	chr17:32334788-32342209	0	-	32339917	32342139	789624	7	51,120,58,144,112,81,210,	0,534,3108,3419,5024,6415,7211,
#Partially deleted in new
chr17	32335341	32341901	chr17:32335341-32341901	0	-	32335341	32337908	789624	6	101,58,144,150,81,39,	0,2555,2866,4471,5862,6521,
#Partially deleted in new
chr17	32338006	32342269	chr17:32338006-32342269	0	-	32338006	32338006	8553170	5	345,126,81,122,29,	0,1806,3197,3993,4234,
#Partially deleted in new
chr17	32338018	32342170	chr17:32338018-32342170	0	-	32338018	32338018	8553170	4	333,126,81,171,	0,1794,3185,3981,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	32340868	32342167	chr17:32340868-32342167	0	-	32340868	32340868	8553170	2	416,168,	0,1131,
#Partially deleted in new
chr17	32343527	32344124	chr17:32343527-32344124	7	-	32343527	32343527	16724991	1	597,	0,
#Deleted in new
chr17	32350108	32350202	chr17:32350108-32350202	3	+	32350108	32350108	5263520	1	94,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	32350116	32381886	chr17:32350116-32381886	1	+	32350285	32369759	789624	12	210,127,139,168,76,48,71,158,93,243,160,12288,	0,1669,8386,10481,10775,11351,12797,15213,16548,17655,19178,19482,
#Partially deleted in new
chr17	32350131	32370451	chr17:32350131-32370451	3	+	32350285	32369759	789624	11	195,127,139,168,76,71,158,93,243,160,853,	0,1654,8371,10466,10760,12782,15198,16533,17640,19163,19467,
#Partially deleted in new
chr17	32350137	32370343	chr17:32350137-32370343	1	+	32350285	32369759	789624	11	189,127,139,168,76,48,71,158,243,160,745,	0,1648,8365,10460,10754,11330,12776,15192,17634,19157,19461,
#Partially deleted in new
chr17	32350163	32360675	chr17:32350163-32360675	0	+	32351906	32360675	789624	4	189,174,139,78,	0,1575,8339,10434,
#Partially deleted in new
chr17	32350164	32360731	chr17:32350164-32360731	0	+	32351906	32360731	789624	4	162,137,139,134,	0,1611,8338,10433,
#Partially deleted in new
chr17	32350174	32369860	chr17:32350174-32369860	1	+	32351622	32369759	789624	13	152,165,170,139,168,76,48,71,158,93,243,160,262,	0,1290,1568,8328,10423,10717,11293,12739,15155,16490,17597,19120,19424,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	32350179	32380956	chr17:32350179-32380956	1	+	32350285	32373409	789624	14	147,127,139,168,76,48,71,158,93,243,160,147,59,3036,	0,1606,8323,10418,10712,11288,12734,15150,16485,17592,19115,19419,23219,27741,
#Partially deleted in new
chr17	32350183	32365416	chr17:32350183-32365416	0	+	32351906	32365416	789624	8	143,115,139,168,76,48,71,87,	0,1614,8319,10414,10708,11284,12730,15146,
#Partially deleted in new
chr17	32350185	32360739	chr17:32350185-32360739	0	+	32351906	32360739	789624	4	141,170,139,142,	0,1557,8317,10412,
#Partially deleted in new
chr17	32350197	32361333	chr17:32350197-32361333	0	+	32350197	32350197	8553170	5	129,127,139,168,442,	0,1588,8305,10400,10694,
#Partially deleted in new
chr17	32350907	32358634	chr17:32350907-32358634	0	+	32351906	32358634	789624	3	274,174,132,	0,831,7595,
#Partially deleted in new
chr17	32360750	32380373	chr17:32360750-32380373	0	+	32360750	32369759	789624	11	15,76,48,71,158,93,243,160,184,59,2453,	0,141,717,2163,4579,5914,7021,8544,8848,12648,17170,
#Partially deleted in new
chr17	32362724	32365465	chr17:32362724-32365465	0	+	32362724	32362724	8553170	2	260,136,	0,2605,
#Partially deleted in new
chr17	32362913	32365591	chr17:32362913-32365591	0	+	32362913	32362913	8553170	2	71,262,	0,2416,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	32366676	32368433	chr17:32366676-32368433	0	+	32366676	32366676	8553170	2	81,662,	0,1095,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	32368831	32378033	chr17:32368831-32378033	0	+	32368831	32368831	8553170	4	623,184,59,113,	0,767,4567,9089,
#Partially deleted in new
chr17	32372894	32378446	chr17:32372894-32378446	0	+	32372894	32372894	8553170	2	563,529,	0,5023,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	32408012	32408309	chr17:32408012-32408309	3	+	32408012	32408012	8553170	1	297,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	32410158	32410746	chr17:32410158-32410746	3	+	32410158	32410158	8553170	1	588,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	32411216	32412420	chr17:32411216-32412420	3	+	32411216	32411216	8553170	2	462,90,	0,1114,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	32423970	32446038	chr17:32423970-32446038	3	-	32423970	32423970	8553170	3	343,287,2523,	0,14503,19545,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	32426757	32438760	chr17:32426757-32438760	0	-	32426757	32426757	8553170	3	132,164,287,	0,9484,11716,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	32430966	32432841	chr17:32430966-32432841	3	+	32430966	32430966	8553170	2	83,480,	0,1395,
#Deleted in new
chr17	32434938	32435028	chr17:32434938-32435028	7	-	32434938	32434938	16724991	1	90,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	32444260	32483318	chr17:32444260-32483318	3	+	32444523	32480631	0	14	354,102,125,72,58,195,145,61,63,126,36,52,143,2566,	0,2684,10234,19788,20260,24738,29540,30503,33260,34990,35590,35885,36228,36492,
#Partially deleted in new
chr17	32444378	32464561	chr17:32444378-32464561	0	+	32454595	32464561	789624	5	140,102,125,72,41,	0,2566,10116,19670,20142,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	32444460	32483295	chr17:32444460-32483295	1	+	32444523	32480631	789624	14	154,102,125,72,58,195,145,61,63,126,36,52,143,1985,	0,2484,10034,19588,20060,24538,29340,30303,33060,34790,35390,35685,36028,36850,
#Partially deleted in new
chr17	32444473	32481471	chr17:32444473-32481471	1	+	32444523	32480631	0	13	141,102,125,72,58,195,145,61,63,126,36,52,983,	0,2471,10021,19575,20047,24525,29327,30290,33047,34777,35377,35672,36015,
#Partially deleted in new
chr17	32444503	32477829	chr17:32444503-32477829	0	+	32444503	32444503	8553170	9	111,102,125,72,58,195,145,61,309,	0,2441,9991,19545,20017,24495,29297,30260,33017,
#Partially deleted in new
chr17	32444504	32464567	chr17:32444504-32464567	0	+	32444523	32464567	789624	6	110,102,125,126,72,47,	0,2440,9990,10247,19544,20016,
#Deleted in new
chr17	32444511	32447333	chr17:32444511-32447333	0	+	32444511	32444511	8553170	2	103,389,	0,2433,
#Partially deleted in new
chr17	32445666	32454611	chr17:32445666-32454611	0	+	32454595	32454611	8553170	3	321,102,117,	0,1278,8828,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	32463373	32463482	chr17:32463373-32463482	3	-	32463373	32463373	8553170	1	109,	0,
#Partially deleted in new
chr17	32469071	32479282	chr17:32469071-32479282	0	+	32469071	32473949	789624	5	122,281,61,63,32,	0,4729,5692,8449,10179,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	32476679	32481024	chr17:32476679-32481024	0	+	32476679	32476679	8553170	3	904,947,536,	0,2571,3809,
#Deleted in new
chr17	32480077	32480962	chr17:32480077-32480962	0	+	32480077	32480077	8553170	3	120,143,210,	0,411,675,
#Deleted in new
chr17	32480191	32480982	chr17:32480191-32480982	0	+	32480191	32480191	8553170	2	440,230,	0,561,
#Deleted in new
chr17	32486618	32491256	chr17:32486618-32491256	3	+	32487620	32488544	0	2	544,3781,	0,857,
#Deleted in new
chr17	32487795	32489520	chr17:32487795-32489520	0	+	32487795	32488302	789624	3	291,294,377,	0,451,1348,
#Deleted in new
chr17	32487795	32488619	chr17:32487795-32488619	0	+	32487795	32488302	789624	2	291,373,	0,451,
#Partially deleted in new
chr17	32492521	32877177	chr17:32492521-32877177	3	-	32494758	32876872	789624	22	2394,155,114,105,145,224,208,167,133,75,71,171,115,146,204,117,96,54,166,94,209,400,	0,112565,146200,161321,161955,166593,219466,228501,245731,252689,256414,262970,267768,267960,272356,275114,278603,280267,283342,285958,288054,384256,
#Partially deleted in new
chr17	32492608	32863043	chr17:32492608-32863043	1	-	32494758	32780615	789624	24	2307,155,114,105,145,224,208,167,133,75,71,171,115,146,204,117,96,54,166,94,209,128,107,140,	0,112478,146113,161234,161868,166506,219379,228414,245644,252602,256327,262883,267681,267873,272269,275027,278516,280180,283255,285871,287967,299855,301584,370295,
#Deleted in new
chr17	32494452	32497073	chr17:32494452-32497073	0	-	32494452	32494452	8553170	2	463,118,	0,2503,
#Partially deleted in new
chr17	32494718	32659406	chr17:32494718-32659406	0	-	32494718	32494718	8553170	6	197,155,114,105,145,292,	0,110368,144003,159124,159758,164396,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	32495535	32499333	chr17:32495535-32499333	0	+	32495535	32495535	8553170	2	756,1724,	0,2074,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	32495773	32500910	chr17:32495773-32500910	3	+	32495773	32495773	8553170	2	518,3304,	0,1833,
#Partially deleted in new
chr17	32504566	32505644	chr17:32504566-32505644	3	-	32504566	32504566	8553170	1	1078,	0,
#Partially deleted in new
chr17	32509953	32523424	chr17:32509953-32523424	3	-	32509953	32509953	8553170	2	899,28,	0,13443,
#Partially deleted in new
chr17	32512868	32519350	chr17:32512868-32519350	3	-	32512868	32512868	8553170	2	94,326,	0,6156,
#Deleted in new
chr17	32518321	32518934	chr17:32518321-32518934	3	-	32518321	32518321	8553170	1	613,	0,
#Partially deleted in new
chr17	32518952	32531492	chr17:32518952-32531492	3	+	32518952	32518952	8553170	2	144,264,	0,12276,
#Deleted in new
chr17	32529007	32530049	chr17:32529007-32530049	3	-	32529007	32529007	8553170	2	57,418,	0,624,
#Partially deleted in new
chr17	32594202	32877144	chr17:32594202-32877144	1	-	32594544	32876872	789624	22	364,155,114,105,145,224,208,167,133,75,71,171,115,146,204,117,96,54,166,94,209,367,	0,10884,44519,59640,60274,64912,117785,126820,144050,151008,154733,161289,166087,166279,170675,173433,176922,178586,181661,184277,186373,282575,
#Partially deleted in new
chr17	32594340	32602711	chr17:32594340-32602711	0	-	32594340	32594340	8553170	2	226,160,	0,8211,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	32627738	32686484	chr17:32627738-32686484	3	+	32627738	32627738	8553170	3	61,80,232,	0,4661,58514,
#Partially deleted in new
chr17	32638774	32659451	chr17:32638774-32659451	0	-	32638774	32638774	8553170	5	61,105,145,224,27,	0,15068,15702,20340,20650,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	32653863	32684284	chr17:32653863-32684284	0	-	32653863	32653863	8553170	4	84,145,224,110,	0,613,5251,30311,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	32658521	32659142	chr17:32658521-32659142	0	-	32658521	32658521	8553170	1	621,	0,
#Partially deleted in new
chr17	32658978	32721135	chr17:32658978-32721135	0	-	32658978	32658978	8553170	3	360,208,113,	0,53009,62044,
#Partially deleted in new
chr17	32721105	32755518	chr17:32721105-32755518	0	-	32745652	32755518	789624	6	84,133,75,168,71,27,	0,17147,24105,24416,27830,34386,
#Partially deleted in new
chr17	32721144	32755719	chr17:32721144-32755719	0	-	32721144	32721144	8553170	5	45,133,75,71,228,	0,17108,24066,27791,34347,
#Partially deleted in new
chr17	32727586	32760396	chr17:32727586-32760396	0	-	32727586	32727586	8553170	6	33,133,75,71,171,107,	0,10666,17624,21349,27905,32703,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	32734724	32749005	chr17:32734724-32749005	0	-	32734724	32734724	8553170	4	181,133,75,70,	0,3528,10486,14211,
#Partially deleted in new
chr17	32738357	32756262	chr17:32738357-32756262	0	-	32738357	32738357	8553170	5	28,75,71,197,56,	0,6853,10578,17134,17849,
#Partially deleted in new
chr17	32759811	32877177	chr17:32759811-32877177	1	-	32760111	32876872	789624	11	315,115,146,204,117,96,54,166,94,209,400,	0,478,670,5066,7824,11313,12977,16052,18668,20764,116966,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	32830218	32830329	chr17:32830218-32830329	3	-	32830218	32830218	8553170	1	111,	0,
#Partially deleted in new
chr17	32876758	32878637	chr17:32876758-32878637	3	+	32876758	32876758	8553170	3	135,118,338,	0,1085,1541,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	32905661	32906584	chr17:32905661-32906584	3	+	32905661	32905661	8553170	2	118,394,	0,529,
#Partially deleted in new
chr17	32927909	32941613	chr17:32927909-32941613	1	+	32931528	32940993	789624	7	328,185,132,34,116,60,828,	0,3565,5264,6381,8422,11567,12876,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	32927936	32944315	chr17:32927936-32944315	3	+	32931528	32940993	789624	8	301,76,185,132,34,116,60,3530,	0,3390,3538,5237,6354,8395,11540,12849,
#Partially deleted in new
chr17	32928044	32936447	chr17:32928044-32936447	0	+	32931528	32936447	789624	5	193,333,132,34,116,	0,3282,5129,6246,8287,
#Partially deleted in new
chr17	32928070	32940977	chr17:32928070-32940977	0	+	32931528	32940977	789624	6	167,185,132,34,116,192,	0,3404,5103,6220,8261,12715,
#Partially deleted in new
chr17	32928203	32945106	chr17:32928203-32945106	1	+	32931528	32944881	789624	7	34,76,185,132,34,116,229,	0,3123,3271,4970,6087,8128,16674,
#Partially deleted in new
chr17	32928203	32934363	chr17:32928203-32934363	0	+	32928203	32928203	8553170	4	34,185,132,73,	0,3271,4970,6087,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	32928209	32940978	chr17:32928209-32940978	0	+	32931528	32940978	789624	9	28,72,76,185,132,34,116,60,193,	0,2690,3117,3265,4964,6081,8122,11267,12576,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	32931033	32934308	chr17:32931033-32934308	0	+	32931528	32934308	789624	3	626,132,18,	0,2140,3257,
#Partially deleted in new
chr17	32931386	32936468	chr17:32931386-32936468	0	+	32931386	32931386	8553170	5	16,185,132,34,137,	0,88,1787,2904,4945,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	32970375	32997877	chr17:32970375-32997877	1	+	32995581	32997778	789624	6	118,118,309,159,79,166,	0,5451,25033,26467,27069,27336,
#Partially deleted in new
chr17	32991868	32997877	chr17:32991868-32997877	3	+	32991938	32997778	789624	5	104,309,159,79,166,	0,3540,4974,5576,5843,
#Partially deleted in new
chr17	32991868	32997877	chr17:32991868-32997877	1	+	32991938	32997778	789624	4	104,159,79,166,	0,4974,5576,5843,
#Deleted in new
chr17	32991888	32995717	chr17:32991888-32995717	0	+	32991888	32991888	8553170	2	84,272,	0,3557,
#Partially deleted in new
chr17	32992850	32997877	chr17:32992850-32997877	0	+	32992850	32992850	8553170	5	155,309,181,79,166,	0,2558,3970,4594,4861,
#Partially deleted in new
chr17	33013086	33292988	chr17:33013086-33292988	3	-	33013964	33292115	789624	10	980,69,80,92,154,57,151,128,151,1581,	0,2884,4518,8132,10774,12839,15155,75776,98830,278321,
#Partially deleted in new
chr17	33013086	34157294	chr17:33013086-34157294	1	-	33013964	34156532	789624	10	980,69,80,92,154,57,151,128,151,1317,	0,2884,4518,8132,10774,12839,15155,75776,98830,1142891,
#Partially deleted in new
chr17	33023864	33291441	chr17:33023864-33291441	0	-	33023864	33023864	8553170	7	150,57,151,128,151,79,34,	0,2061,4377,64998,88052,266811,267543,
#Deleted in new
chr17	33052106	33052867	chr17:33052106-33052867	3	-	33052106	33052106	8553170	2	360,67,	0,694,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	33099968	33100319	chr17:33099968-33100319	3	-	33099968	33099968	8553170	1	351,	0,
#Partially deleted in new
chr17	33111857	33131743	chr17:33111857-33131743	3	+	33111857	33111857	8553170	3	302,86,169,	0,874,19717,
#Partially deleted in new
chr17	33111940	33291107	chr17:33111940-33291107	0	-	33111940	33111940	8553170	2	127,432,	0,178735,
#Partially deleted in new
chr17	33529786	33533760	chr17:33529786-33533760	3	-	33529786	33529786	789624	3	412,64,156,	0,3663,3818,
#Partially deleted in new
chr17	33534109	33541339	chr17:33534109-33541339	3	+	33534109	33534109	8553170	2	508,55,	0,7175,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	33565763	33581453	chr17:33565763-33581453	1	+	33565763	33565763	8553170	3	158,123,298,	0,3571,15392,
#Partially deleted in new
chr17	33569156	33572345	chr17:33569156-33572345	1	+	33569156	33569156	8553170	3	52,123,358,	0,178,2831,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	33580075	33624122	chr17:33580075-33624122	3	+	33580075	33580075	8553170	4	198,310,91,34,	0,1080,43378,44013,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	33627026	33635057	chr17:33627026-33635057	3	+	33627026	33627026	8553170	2	240,321,	0,7710,
#Deleted in new
chr17	33680576	33680883	chr17:33680576-33680883	3	+	33680576	33680576	8553170	1	307,	0,
#Deleted in new
chr17	33688802	33689174	chr17:33688802-33689174	3	+	33688802	33688802	8553170	1	372,	0,
#Partially deleted in new
chr17	33692228	33692484	chr17:33692228-33692484	7	+	33692228	33692228	16724991	1	256,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	33791837	33816761	chr17:33791837-33816761	3	-	33791837	33791837	8553170	3	1071,1316,9,	0,1596,24915,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	33827727	33984316	chr17:33827727-33984316	0	-	33827727	33827727	8553170	2	754,130,	0,156459,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	33827756	33932685	chr17:33827756-33932685	0	-	33827756	33827756	8553170	2	725,86,	0,104843,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	33827763	33834567	chr17:33827763-33834567	1	-	33827763	33827763	8553170	2	718,630,	0,6174,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	33931131	34079100	chr17:33931131-34079100	3	-	33931131	33931131	8553170	5	246,86,819,1509,207,	0,1468,4872,139685,147762,
#Partially deleted in new
chr17	33935436	34156000	chr17:33935436-34156000	3	-	33935436	33935436	8553170	4	1386,184,33,241,	0,105797,116267,220323,
#Partially deleted in new
chr17	33935443	33984374	chr17:33935443-33984374	1	-	33935443	33935443	8553170	2	1379,188,	0,48743,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	33955023	34071562	chr17:33955023-34071562	0	-	33955023	33955023	8553170	2	506,746,	0,115793,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	33976530	33980851	chr17:33976530-33980851	3	+	33976530	33976530	8553170	2	216,107,	0,4214,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	34000788	34006772	chr17:34000788-34006772	3	-	34000788	34000788	8553170	1	5984,	0,
#Deleted in new
chr17	34036680	34039872	chr17:34036680-34039872	7	-	34036680	34036680	16724991	1	3192,	0,
#Deleted in new
chr17	34069316	34071251	chr17:34069316-34071251	0	-	34069316	34069316	8553170	1	1935,	0,
#Deleted in new
chr17	34080881	34082224	chr17:34080881-34082224	3	-	34080881	34080881	8553170	2	96,203,	0,1140,
#Deleted in new
chr17	34118346	34118882	chr17:34118346-34118882	3	-	34118346	34118346	8553170	1	536,	0,
#Deleted in new
chr17	34120055	34120167	chr17:34120055-34120167	7	-	34120055	34120055	16724991	1	112,	0,
#Partially deleted in new
chr17	34142946	34147047	chr17:34142946-34147047	3	+	34142946	34142946	8553170	2	87,288,	0,3813,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	34155565	34165679	chr17:34155565-34165679	3	+	34155565	34155565	8553170	4	1137,73,475,2068,	0,3477,5859,8046,
#Partially deleted in new
chr17	34157180	34174964	chr17:34157180-34174964	0	-	34157180	34157180	8553170	2	103,405,	0,17379,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	34169371	34195937	chr17:34169371-34195937	0	-	34169371	34169371	8553170	3	188,94,24,	0,21203,26542,
#Partially deleted in new
chr17	34169371	34182845	chr17:34169371-34182845	0	-	34169371	34169371	8553170	2	188,85,	0,13389,
#Deleted in new
chr17	34176537	34178166	chr17:34176537-34178166	3	+	34176537	34176537	8553170	1	1629,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	34255217	34256209	chr17:34255217-34256209	0	+	34255217	34255217	8553170	1	992,	0,
#Partially deleted in new
chr17	34255284	34257203	chr17:34255284-34257203	3	+	34255349	34256827	0	3	141,118,482,	0,937,1437,
#Partially deleted in new
chr17	34255284	34256816	chr17:34255284-34256816	1	+	34255349	34256343	789624	2	141,595,	0,937,
#Deleted in new
chr17	34256207	34257203	chr17:34256207-34257203	0	+	34256207	34256207	8553170	1	996,	0,
#Deleted in new
chr17	34270220	34272242	chr17:34270220-34272242	3	+	34270290	34271802	0	3	146,118,546,	0,925,1476,
#Deleted in new
chr17	34270223	34272078	chr17:34270223-34272078	1	+	34270290	34271262	789624	3	143,171,382,	0,869,1473,
#Deleted in new
chr17	34270223	34272240	chr17:34270223-34272240	1	+	34270290	34271764	789624	2	143,544,	0,1473,
#Deleted in new
chr17	34285667	34288334	chr17:34285667-34288334	3	+	34285808	34287690	0	3	217,112,750,	0,1428,1917,
#Deleted in new
chr17	34319035	34321402	chr17:34319035-34321402	3	+	34319501	34320907	0	3	542,118,601,	0,1233,1766,
#Deleted in new
chr17	34331861	34332228	chr17:34331861-34332228	7	-	34331861	34331861	16724991	1	367,	0,
#Partially deleted in new
chr17	34356451	34358610	chr17:34356451-34358610	3	+	34356526	34358131	0	3	151,115,585,	0,1023,1574,
#Deleted in new
chr17	34357484	34358610	chr17:34357484-34358610	0	+	34357484	34358131	789624	2	84,585,	0,541,
#Deleted in new
chr17	34360327	34363231	chr17:34360327-34363231	3	-	34360558	34363161	0	3	334,112,146,	0,1457,2758,
#Deleted in new
chr17	34479311	34479928	chr17:34479311-34479928	0	+	34479311	34479311	8553170	2	196,125,	0,492,
#Deleted in new
chr17	34479333	34479957	chr17:34479333-34479957	3	+	34479333	34479333	8553170	2	174,149,	0,475,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	34574122	34579369	chr17:34574122-34579369	3	-	34574122	34574122	8553170	2	3498,499,	0,4748,
#Partially deleted in new
chr17	34579486	34639318	chr17:34579486-34639318	1	+	34581076	34638232	789624	10	1657,458,203,147,193,144,206,289,192,2142,	0,46640,47368,49076,49525,50521,53217,55312,56520,57690,
#Partially deleted in new
chr17	34581008	34639318	chr17:34581008-34639318	3	+	34581076	34638232	789624	9	135,931,147,193,144,206,289,192,2142,	0,45118,47554,48003,48999,51695,53790,54998,56168,
#Deleted in new
chr17	34614408	34614809	chr17:34614408-34614809	3	+	34614408	34614408	8553170	1	401,	0,
#Deleted in new
chr17	34635792	34637506	chr17:34635792-34637506	0	+	34635792	34635792	8553170	2	406,330,	0,1384,
#Deleted in new
chr17	34725508	34726170	chr17:34725508-34726170	3	-	34725508	34725508	8553170	1	662,	0,
#Partially deleted in new
chr17	34837870	34859046	chr17:34837870-34859046	3	-	34837870	34837870	8553170	2	216,253,	0,20923,
#Partially deleted in new
chr17	34927858	34961402	chr17:34927858-34961402	1	-	34928047	34961393	789624	13	259,73,103,134,148,97,83,160,104,174,135,64,146,	0,1103,3090,4508,11324,11758,12680,14625,24091,26567,30701,31728,33398,
#Partially deleted in new
chr17	34927918	34961509	chr17:34927918-34961509	3	-	34928047	34961393	789624	14	199,73,103,134,148,97,83,160,111,104,174,135,64,253,	0,1043,3030,4448,11264,11698,12620,14565,14877,24031,26507,30641,31668,33338,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	34927929	34949715	chr17:34927929-34949715	0	-	34927929	34927929	8553170	8	188,73,103,134,531,83,1980,261,	0,1032,3019,4437,11253,12609,14554,21525,
#Partially deleted in new
chr17	34927931	34961458	chr17:34927931-34961458	1	-	34928047	34961393	789624	13	186,73,103,134,148,97,83,160,111,104,174,64,202,	0,1030,3017,4435,11251,11685,12607,14552,14864,24018,26494,31655,33325,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	34937305	34938604	chr17:34937305-34938604	3	+	34937305	34937305	8553170	2	795,177,	0,1122,
#Partially deleted in new
chr17	34942558	34981078	chr17:34942558-34981078	0	-	34942558	34954509	789624	5	85,111,104,174,180,	0,237,9391,11867,38340,
#Deleted in new
chr17	34961529	34963775	chr17:34961529-34963775	3	+	34961566	34962685	789624	1	2246,	0,
#Deleted in new
chr17	34962364	34963186	chr17:34962364-34963186	0	+	34962364	34962685	789624	2	504,163,	0,659,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr17	34980493	35009743	chr17:34980493-35009743	3	+	34983005	35004506	0	20	129,551,144,198,152,167,78,169,156,132,80,88,78,124,143,75,147,196,122,5471,	0,2508,5494,8972,10469,11177,11464,12030,13782,15570,16080,17244,17725,18110,18813,19288,20763,21415,22174,23779,
#Partially deleted in new
chr17	34980511	34994429	chr17:34980511-34994429	0	+	34980574	34994429	789624	9	86,551,144,198,152,167,78,169,154,	0,2490,5476,8954,10451,11159,11446,12012,13764,
#Partially deleted in new
chr17	34980545	35003172	chr17:34980545-35003172	1	+	34983005	35003048	0	20	77,551,144,198,152,167,78,169,156,132,80,88,78,124,143,75,147,196,122,178,	0,2456,5442,8920,10417,11125,11412,11978,13730,15518,16028,17192,17673,18058,18761,19236,20711,21363,22122,22449,
#Partially deleted in new
chr17	34980557	34989657	chr17:34980557-34989657	0	+	34983266	34989657	789624	4	65,321,144,192,	0,2674,5430,8908,
#Partially deleted in new
chr17	34980558	34992607	chr17:34980558-34992607	0	+	34989587	34992607	789624	7	64,144,198,152,167,78,84,	0,5429,8907,10404,11112,11399,11965,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	34980576	34989880	chr17:34980576-34989880	0	+	34980576	34980576	8553170	4	46,551,144,415,	0,2425,5411,8889,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	34980639	34989540	chr17:34980639-34989540	0	+	34980639	34980639	8553170	4	519,77,144,75,	0,841,5348,8826,
#Partially deleted in new
chr17	34983451	34991065	chr17:34983451-34991065	0	+	34983451	34985955	789624	4	101,190,198,103,	0,2490,6014,7511,
#Partially deleted in new
chr17	34986093	34991314	chr17:34986093-34991314	0	+	34986093	34986093	8553170	3	38,198,352,	0,3372,4869,
#Deleted in new
chr17	34991636	34997825	chr17:34991636-34997825	0	+	34991636	34991636	8553170	7	201,78,169,156,132,80,88,	0,321,887,2639,4427,4937,6101,
#Deleted in new
chr17	34994186	34998254	chr17:34994186-34998254	0	+	34994186	34994186	8553170	5	245,132,80,88,36,	0,1877,2387,3551,4032,
#Deleted in new
chr17	34994274	34996373	chr17:34994274-34996373	0	+	34994274	34994274	8553170	2	157,310,	0,1789,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	34997033	35004804	chr17:34997033-35004804	0	+	34997033	34997033	8553170	6	1263,846,75,147,196,2137,	0,1570,2748,4223,4875,5634,
#Partially deleted in new
chr17	34997717	35001293	chr17:34997717-35001293	0	+	34997717	34997717	8553170	6	108,78,124,143,75,37,	0,501,886,1589,2064,3539,
#Deleted in new
chr17	34997755	34998671	chr17:34997755-34998671	0	+	34997755	34998238	789624	3	70,97,68,	0,444,848,
#Partially deleted in new
chr17	35002833	35004372	chr17:35002833-35004372	0	+	35002833	35002833	8553170	2	340,100,	0,1439,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	35005989	35089319	chr17:35005989-35089319	3	-	35011967	35026553	0	7	6160,24,211,84,411,188,215,	0,8750,10380,11533,15381,20384,83115,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	35007245	35008232	chr17:35007245-35008232	0	-	35007245	35007245	8553170	2	209,361,	0,626,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	35009111	35089295	chr17:35009111-35089295	1	-	35011967	35026553	0	5	3038,211,411,188,191,	0,7258,12259,17262,79993,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	35009117	35063852	chr17:35009117-35063852	1	-	35011967	35026553	0	7	3032,24,211,84,411,188,277,	0,5622,7252,8405,12253,17256,54458,
#Partially deleted in new
chr17	35011348	35121493	chr17:35011348-35121493	3	-	35011967	35121293	789624	7	801,211,165,71,91,96,203,	0,5021,89852,91905,92105,95037,109942,
#Partially deleted in new
chr17	35011613	35089315	chr17:35011613-35089315	1	-	35011967	35026553	0	8	536,24,211,84,411,188,365,211,	0,3126,4756,5909,9757,14760,57680,77491,
#Partially deleted in new
chr17	35011678	35042351	chr17:35011678-35042351	1	-	35011967	35026553	0	8	471,24,211,84,411,188,181,136,	0,3061,4691,5844,9692,14695,24659,30537,
#Partially deleted in new
chr17	35011908	35042297	chr17:35011908-35042297	1	-	35011967	35026553	0	6	241,211,84,411,188,82,	0,4461,5614,9462,14465,30307,
#Partially deleted in new
chr17	35012001	35021411	chr17:35012001-35021411	0	-	35012001	35021411	789624	4	148,24,211,41,	0,2738,4368,9369,
#Partially deleted in new
chr17	35012048	35089247	chr17:35012048-35089247	0	-	35012048	35012048	8553170	5	101,24,211,84,143,	0,2691,4321,5474,77056,
#Partially deleted in new
chr17	35016461	35026568	chr17:35016461-35026568	0	-	35016461	35026553	789624	3	119,84,195,	0,1061,9912,
#Partially deleted in new
chr17	35016568	35121449	chr17:35016568-35121449	0	-	35016568	35106430	789624	7	12,165,71,91,96,82,159,	0,84632,86685,86885,89817,90797,104722,
#Deleted in new
chr17	35018659	35018991	chr17:35018659-35018991	3	+	35018659	35018659	8553170	1	332,	0,
#Partially deleted in new
chr17	35021505	35088835	chr17:35021505-35088835	0	-	35021505	35026553	789624	3	276,188,95,	0,4868,67235,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	35021621	35089194	chr17:35021621-35089194	0	-	35025337	35026553	789624	4	160,158,188,90,	0,3561,4752,67483,
#Partially deleted in new
chr17	35026495	35120065	chr17:35026495-35120065	0	-	35026495	35107110	789624	9	66,165,71,91,96,135,82,62,19,	0,74705,76758,76958,79890,80492,80870,92615,93551,
#Partially deleted in new
chr17	35073830	35074374	chr17:35073830-35074374	3	-	35073830	35073830	8553170	1	544,	0,
#Partially deleted in new
chr17	35076736	35077007	chr17:35076736-35077007	7	+	35076736	35076736	16724991	1	271,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	35092207	35119869	chr17:35092207-35119869	3	-	35100952	35119613	0	10	8829,165,71,91,96,135,82,119,62,338,	0,8993,11046,11246,14178,14780,15158,26293,26903,27324,
#Deleted in new
chr17	35097559	35097657	chr17:35097559-35097657	3	-	35097559	35097559	8553170	1	98,	0,
#Partially deleted in new
chr17	35099791	35120044	chr17:35099791-35120044	1	-	35100952	35119613	0	11	1245,165,71,91,96,135,82,119,62,198,23,	0,1409,3462,3662,6594,7196,7574,18709,19319,19740,20230,
#Partially deleted in new
chr17	35099791	35121497	chr17:35099791-35121497	0	-	35106186	35107110	789624	9	1245,165,71,91,122,96,135,82,207,	0,1409,3462,3662,6336,6594,7196,7574,21499,
#Partially deleted in new
chr17	35100382	35119745	chr17:35100382-35119745	1	-	35100952	35119613	0	7	654,165,71,91,96,62,214,	0,818,2871,3071,6003,18728,19149,
#Partially deleted in new
chr17	35100382	35119746	chr17:35100382-35119746	0	-	35107441	35119613	0	9	654,165,71,91,96,135,82,62,215,	0,818,2871,3071,6003,6605,6983,18728,19149,
#Partially deleted in new
chr17	35100382	35119719	chr17:35100382-35119719	0	-	35107441	35119613	0	8	654,165,71,91,96,82,62,188,	0,818,2871,3071,6003,6983,18728,19149,
#Partially deleted in new
chr17	35100529	35119838	chr17:35100529-35119838	0	-	35116943	35119613	0	10	507,165,71,91,96,135,179,119,62,307,	0,671,2724,2924,5856,6458,16329,17971,18581,19002,
#Partially deleted in new
chr17	35100671	35119813	chr17:35100671-35119813	1	-	35100952	35119613	0	10	365,165,71,91,96,135,82,179,62,282,	0,529,2582,2782,5714,6316,6694,16187,18439,18860,
#Partially deleted in new
chr17	35100766	35119716	chr17:35100766-35119716	0	-	35107061	35119613	789624	9	270,165,71,91,96,135,119,62,185,	0,434,2487,2687,5619,6221,17734,18344,18765,
#Partially deleted in new
chr17	35100826	35119744	chr17:35100826-35119744	1	-	35100952	35106430	789624	9	210,165,71,91,96,74,82,62,213,	0,374,2427,2627,5559,6161,6539,18284,18705,
#Partially deleted in new
chr17	35101323	35121449	chr17:35101323-35121449	0	-	35101323	35107110	789624	7	42,71,91,96,135,82,159,	0,1930,2130,5062,5664,6042,19967,
#Partially deleted in new
chr17	35101361	35119801	chr17:35101361-35119801	0	-	35101361	35119787	789624	9	4,71,91,96,135,82,119,62,102,	0,1892,2092,5024,5626,6004,17139,17749,18338,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	35103515	35119546	chr17:35103515-35119546	0	-	35103515	35106430	789624	3	29,96,436,	0,2870,15595,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	35104852	35121522	chr17:35104852-35121522	0	-	35104852	35104852	8553170	8	138,122,96,135,82,119,62,232,	0,1275,1533,2135,2513,13648,14258,16438,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	35104935	35121481	chr17:35104935-35121481	0	-	35104935	35104935	8553170	4	55,354,82,191,	0,1192,2430,16355,
#Partially deleted in new
chr17	35106137	35121522	chr17:35106137-35121522	0	-	35106137	35106137	8553170	5	153,96,135,82,232,	0,248,850,1228,15153,
#Partially deleted in new
chr17	35106185	35121449	chr17:35106185-35121449	0	-	35106185	35106185	8553170	4	296,135,82,159,	0,802,1180,15105,
#Partially deleted in new
chr17	35106385	35121467	chr17:35106385-35121467	0	-	35106385	35106385	8553170	5	96,82,179,62,177,	0,980,10473,12725,14905,
#Partially deleted in new
chr17	35106440	35119157	chr17:35106440-35119157	0	-	35116943	35119157	789624	6	41,135,82,179,119,47,	0,547,925,10418,12060,12670,
#Partially deleted in new
chr17	35106440	35119157	chr17:35106440-35119157	0	-	35106440	35119157	789624	4	41,82,119,47,	0,925,12060,12670,
#Partially deleted in new
chr17	35106440	35119157	chr17:35106440-35119157	0	-	35116943	35119157	789624	4	41,179,119,47,	0,10418,12060,12670,
#Partially deleted in new
chr17	35106440	35119157	chr17:35106440-35119157	0	-	35106440	35106440	8553170	3	41,119,47,	0,12060,12670,
#Partially deleted in new
chr17	35107238	35119824	chr17:35107238-35119824	0	-	35107238	35107238	8553170	3	209,62,293,	0,11872,12293,
#Partially deleted in new
chr17	35121578	35130732	chr17:35121578-35130732	3	+	35121693	35130434	789624	4	324,376,237,451,	0,5463,7843,8703,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	35128752	35142284	chr17:35128752-35142284	1	-	35132436	35136449	789624	12	3697,71,160,203,47,136,193,98,77,80,218,306,	0,4418,4586,6496,7416,7609,8248,8790,9061,10482,11096,13226,
#Partially deleted in new
chr17	35131346	35142315	chr17:35131346-35142315	3	-	35132436	35142275	789624	13	1103,71,160,203,47,136,193,98,77,80,218,144,58,	0,1824,1992,3902,4822,5015,5654,6196,6467,7888,8502,10632,10911,
#Partially deleted in new
chr17	35132070	35142303	chr17:35132070-35142303	1	-	35132436	35142275	789624	12	379,71,160,203,47,136,193,98,31,218,144,46,	0,1100,1268,3178,4098,4291,4930,5472,7213,7778,9908,10187,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	35132243	35137167	chr17:35132243-35137167	0	-	35132436	35137167	789624	8	206,71,160,117,203,47,136,167,	0,927,1095,2699,3005,3925,4118,4757,
#Partially deleted in new
chr17	35136366	35142304	chr17:35136366-35142304	0	-	35139844	35142275	789624	8	131,193,98,77,80,247,144,47,	0,634,1176,1447,2868,3453,5612,5891,
#Partially deleted in new
chr17	35137023	35142233	chr17:35137023-35142233	0	-	35137023	35137023	8553170	5	170,77,80,218,255,	0,790,2211,2825,4955,
#Partially deleted in new
chr17	35137052	35142297	chr17:35137052-35142297	0	-	35137868	35142275	789624	6	141,98,77,80,144,40,	0,490,761,2182,4926,5205,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr17	35147816	35189345	chr17:35147816-35189345	3	+	35148263	35186559	789624	20	94,171,37,176,90,168,169,171,172,301,95,148,141,128,67,114,116,118,156,3047,	0,444,1156,2231,5076,6757,7479,11558,16178,20244,22020,22297,23505,26425,28151,29200,29678,32742,35610,38482,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr17	35147840	35189337	chr17:35147840-35189337	1	+	35148263	35186559	789624	20	70,168,37,176,90,168,169,171,172,301,95,142,141,128,67,114,116,118,156,3039,	0,423,1132,2207,5052,6733,7455,11534,16154,20220,21996,22273,23481,26401,28127,29176,29654,32718,35586,38458,
#Partially deleted in new
chr17	35148263	35186559	chr17:35148263-35186559	1	+	35148263	35186559	789624	17	168,37,176,90,168,169,171,172,301,141,128,67,114,116,118,156,261,	0,709,1784,4629,6310,7032,11111,15731,19797,23058,25978,27704,28753,29231,32295,35163,38035,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	35164242	35167012	chr17:35164242-35167012	3	-	35164242	35164242	8553170	2	408,67,	0,2703,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	35188521	35191343	chr17:35188521-35191343	3	+	35188521	35188521	8553170	2	115,444,	0,2378,
#Deleted in new
chr17	35190960	35191702	chr17:35190960-35191702	7	+	35190960	35190960	16724991	1	742,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	35192519	35194523	chr17:35192519-35194523	3	-	35193290	35194307	789624	1	2004,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	35231449	35242963	chr17:35231449-35242963	3	-	35231449	35231449	8553170	2	1193,1465,	0,10049,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	35232266	35237981	chr17:35232266-35237981	0	-	35232266	35232266	8553170	2	376,156,	0,5559,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	35243035	35273655	chr17:35243035-35273655	3	+	35258690	35265888	789624	5	108,1052,126,721,8584,	0,15615,17935,21147,22036,
#Partially deleted in new
chr17	35243070	35266360	chr17:35243070-35266360	1	+	35258690	35265103	789624	4	73,1052,126,1289,	0,15580,17900,22001,
#Partially deleted in new
chr17	35243088	35259820	chr17:35243088-35259820	1	+	35258690	35259707	789624	2	55,1170,	0,15562,
#Deleted in new
chr17	35344230	35344564	chr17:35344230-35344564	7	+	35344230	35344230	16724991	1	334,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	35350304	35373607	chr17:35350304-35373607	1	-	35352355	35363807	789624	5	2835,724,129,1088,134,	0,3031,9938,12434,23169,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	35350304	35373620	chr17:35350304-35373620	3	-	35352355	35363807	789624	7	2835,724,129,1088,117,98,39,	0,3031,9938,12434,16642,17298,23277,
#Deleted in new
chr17	35351898	35353131	chr17:35351898-35353131	0	-	35352870	35353131	789624	2	977,147,	0,1086,
#Partially deleted in new
chr17	35360018	35362992	chr17:35360018-35362992	0	-	35360018	35360018	8553170	2	353,226,	0,2748,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	35363621	35367294	chr17:35363621-35367294	0	-	35363621	35363621	8553170	2	205,348,	0,3325,
#Partially deleted in new
chr17	35367265	35373620	chr17:35367265-35373620	0	-	35367265	35367265	8553170	2	435,147,	0,6208,
#Deleted in new
chr17	35377415	35377678	chr17:35377415-35377678	7	-	35377415	35377415	16724991	1	263,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	35403836	35404373	chr17:35403836-35404373	3	-	35403836	35403836	8553170	1	537,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	35406683	35409768	chr17:35406683-35409768	3	-	35406683	35406683	8553170	2	908,304,	0,2781,
#Deleted in new
chr17	35406947	35407818	chr17:35406947-35407818	7	-	35406947	35406947	16724991	1	871,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	35409601	35410228	chr17:35409601-35410228	7	-	35409601	35409601	16724991	1	627,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	35411068	35432524	chr17:35411068-35432524	1	-	35411337	35423028	789624	4	859,108,1079,337,	0,9205,10921,21119,
#Partially deleted in new
chr17	35411070	35433283	chr17:35411070-35433283	3	-	35411337	35423028	789624	4	857,108,1079,379,	0,9203,10919,21834,
#Partially deleted in new
chr17	35411316	35420765	chr17:35411316-35420765	0	-	35411316	35411316	8553170	3	611,108,135,	0,8957,9314,
#Partially deleted in new
chr17	35411367	35420835	chr17:35411367-35420835	0	-	35411367	35411367	8553170	2	560,562,	0,8906,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	35422682	35433199	chr17:35422682-35433199	0	-	35422682	35423028	789624	3	386,70,295,	0,9505,10222,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	35435095	35448837	chr17:35435095-35448837	3	-	35440594	35445680	789624	6	6271,724,132,1079,147,116,	0,6467,8693,9519,12172,13626,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	35437542	35448782	chr17:35437542-35448782	1	-	35440594	35445680	789624	7	3824,724,132,1079,37,147,61,	0,4020,6246,7072,9174,9725,11179,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	35437544	35447394	chr17:35437544-35447394	1	-	35440594	35445680	789624	6	3822,724,132,1079,37,127,	0,4018,6244,7070,9172,9723,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	35438983	35448837	chr17:35438983-35448837	0	-	35444649	35445680	789624	7	2383,724,132,87,321,147,116,	0,2579,4805,5631,6389,8284,9738,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	35439479	35448764	chr17:35439479-35448764	1	-	35440594	35445680	789624	7	1887,724,132,87,38,147,43,	0,2083,4309,5135,6176,7788,9242,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	35439497	35446010	chr17:35439497-35446010	1	-	35440594	35445680	789624	4	1869,724,132,1396,	0,2065,4291,5117,
#Partially deleted in new
chr17	35441889	35443954	chr17:35441889-35443954	0	-	35441889	35441889	8553170	2	397,166,	0,1899,
#Partially deleted in new
chr17	35442099	35448764	chr17:35442099-35448764	0	-	35442099	35444687	789624	5	187,132,87,147,43,	0,1689,2515,5168,6622,
#Partially deleted in new
chr17	35445361	35448369	chr17:35445361-35448369	0	-	35445361	35445680	789624	3	332,147,97,	0,1906,2911,
#Partially deleted in new
chr17	35445447	35448785	chr17:35445447-35448785	0	-	35445447	35445680	789624	4	246,93,147,64,	0,1392,1820,3274,
#Partially deleted in new
chr17	35446985	35448755	chr17:35446985-35448755	0	-	35446985	35446985	8553170	2	429,34,	0,1736,
#Deleted in new
chr17	35459480	35460550	chr17:35459480-35460550	7	-	35459480	35459480	16724991	1	1070,	0,
#Partially deleted in new
chr17	35464248	35478469	chr17:35464248-35478469	0	-	35464248	35464248	8553170	2	414,395,	0,13826,
#Partially deleted in new
chr17	35464256	35478226	chr17:35464256-35478226	0	-	35464256	35464256	8553170	2	325,152,	0,13818,
#Deleted in new
chr17	35470068	35470628	chr17:35470068-35470628	7	-	35470068	35470068	16724991	1	560,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	35473688	35487857	chr17:35473688-35487857	3	-	35474922	35487739	789624	4	1797,111,1079,132,	0,4386,5428,14037,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	35474903	35537861	chr17:35474903-35537861	1	-	35474922	35522379	789624	5	582,111,1079,691,289,	0,3171,4213,47375,62669,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	35474922	35480513	chr17:35474922-35480513	1	-	35474922	35480513	789624	4	563,111,1081,12,	0,3152,4194,5579,
#Deleted in new
chr17	35477993	35478444	chr17:35477993-35478444	3	+	35477993	35477993	8553170	1	451,	0,
#Deleted in new
chr17	35490008	35491238	chr17:35490008-35491238	7	+	35490008	35490008	16724991	1	1230,	0,
#Deleted in new
chr17	35498217	35499175	chr17:35498217-35499175	7	+	35498217	35498217	16724991	1	958,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	35499689	35510270	chr17:35499689-35510270	3	-	35499689	35499689	8553170	3	773,4,72,	0,10346,10509,
#Deleted in new
chr17	35514765	35515186	chr17:35514765-35515186	7	-	35514765	35514765	16724991	1	421,	0,
#Partially deleted in new
chr17	35548124	35558098	chr17:35548124-35558098	3	-	35548238	35558062	789624	4	949,715,129,1096,	0,4605,6451,8878,
#Partially deleted in new
chr17	35553204	35554767	chr17:35553204-35554767	3	+	35553204	35553204	8553170	2	287,170,	0,1393,
#Deleted in new
chr17	35566516	35566672	chr17:35566516-35566672	7	+	35566516	35566516	16724991	1	156,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	35568108	35574843	chr17:35568108-35574843	3	+	35568108	35568108	8553170	3	393,144,967,	0,5471,5768,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	35568119	35574792	chr17:35568119-35574792	0	+	35568119	35568119	789624	2	382,916,	0,5757,
#Deleted in new
chr17	35573656	35573753	chr17:35573656-35573753	3	+	35573656	35573656	789624	1	97,	0,
#Partially deleted in new
chr17	35574794	35578629	chr17:35574794-35578629	1	-	35575781	35578021	789624	3	1387,554,734,	0,2243,3101,
#Partially deleted in new
chr17	35574795	35578637	chr17:35574795-35578637	3	-	35575781	35578021	789624	3	1386,554,742,	0,2242,3100,
#Partially deleted in new
chr17	35575785	35578552	chr17:35575785-35578552	0	-	35575785	35578021	789624	3	396,554,657,	0,1252,2110,
#Deleted in new
chr17	35577054	35578863	chr17:35577054-35578863	0	-	35577054	35578021	789624	3	537,182,178,	0,841,1631,
#Partially deleted in new
chr17	35578045	35608315	chr17:35578045-35608315	0	+	35594030	35608315	789624	5	76,60,106,136,174,	0,15962,20184,27659,30096,
#Partially deleted in new
chr17	35586898	35657791	chr17:35586898-35657791	0	+	35594030	35657791	789624	14	530,60,106,136,246,191,222,121,96,116,166,99,260,193,	0,7109,11331,18806,21243,37498,39722,40486,40732,49442,52696,54978,63631,70700,
#Partially deleted in new
chr17	35587273	35726409	chr17:35587273-35726409	1	+	35594030	35723699	0	21	155,60,106,136,246,191,222,121,96,116,166,99,260,193,147,146,130,85,87,155,2785,	0,6734,10956,18431,20868,37123,39347,40111,40357,49067,52321,54603,63256,70325,84480,86902,95421,121950,122960,129921,136351,
#Partially deleted in new
chr17	35587313	35724086	chr17:35587313-35724086	1	+	35594030	35723699	789624	22	115,60,106,136,132,191,222,121,96,116,166,99,260,193,42,147,146,130,85,87,155,462,	0,6694,10916,18391,20942,37083,39307,40071,40317,49027,52281,54563,63216,70285,83543,84440,86862,95381,121910,122920,129881,136311,
#Partially deleted in new
chr17	35587313	35724089	chr17:35587313-35724089	0	+	35594030	35600992	789624	22	115,60,106,86,136,246,191,222,121,96,116,166,99,260,193,147,146,130,85,87,155,465,	0,6694,10916,13672,18391,20828,37083,39307,40071,40317,49027,52281,54563,63216,70285,84440,86862,95381,121910,122920,129881,136311,
#Partially deleted in new
chr17	35587313	35670898	chr17:35587313-35670898	0	+	35594030	35670898	789624	15	115,60,106,136,132,191,222,121,96,116,166,99,260,193,42,	0,6694,10916,18391,20942,37083,39307,40071,40317,49027,52281,54563,63216,70285,83543,
#Partially deleted in new
chr17	35587321	35608165	chr17:35587321-35608165	0	+	35594030	35600985	789624	6	107,60,106,135,136,24,	0,6686,10908,13615,18383,20820,
#Partially deleted in new
chr17	35587321	35608292	chr17:35587321-35608292	0	+	35594030	35600985	789624	5	107,60,106,135,151,	0,6686,10908,13615,20820,
#Partially deleted in new
chr17	35587321	35723917	chr17:35587321-35723917	3	+	35594030	35723699	0	22	107,60,106,136,246,191,222,121,96,116,166,99,260,193,42,147,146,130,85,87,155,293,	0,6686,10908,18383,20820,37075,39299,40063,40309,49019,52273,54555,63208,70277,83535,84432,86854,95373,121902,122912,129873,136303,
#Partially deleted in new
chr17	35587321	35670898	chr17:35587321-35670898	0	+	35594030	35670898	789624	15	107,60,106,136,246,191,222,121,96,116,166,99,260,193,42,	0,6686,10908,18383,20820,37075,39299,40063,40309,49019,52273,54555,63208,70277,83535,
#Partially deleted in new
chr17	35587366	35670898	chr17:35587366-35670898	0	+	35594030	35670898	789624	15	231,60,106,136,246,191,222,121,96,116,166,99,260,193,42,	0,6641,10863,18338,20775,37030,39254,40018,40264,48974,52228,54510,63163,70232,83490,
#Partially deleted in new
chr17	35587415	35605801	chr17:35587415-35605801	0	+	35594030	35605801	789624	5	182,109,60,106,97,	0,1209,6592,10814,18289,
#Partially deleted in new
chr17	35587451	35724091	chr17:35587451-35724091	1	+	35594030	35670898	789624	22	212,60,106,136,246,191,222,121,96,116,166,99,260,193,42,147,146,130,85,87,155,467,	0,6556,10778,18253,20690,36945,39169,39933,40179,48889,52143,54425,63078,70147,83405,84302,86724,95243,121772,122782,129743,136173,
#Partially deleted in new
chr17	35587514	35724086	chr17:35587514-35724086	1	+	35594030	35723699	0	22	149,60,106,136,246,191,222,121,96,116,166,99,260,193,42,147,146,130,85,87,155,462,	0,6493,10715,18190,20627,36882,39106,39870,40116,48826,52080,54362,63015,70084,83342,84239,86661,95180,121709,122719,129680,136110,
#Partially deleted in new
chr17	35587530	35601037	chr17:35587530-35601037	0	+	35587530	35587530	8553170	4	67,60,106,101,	0,6477,10699,13406,
#Partially deleted in new
chr17	35587565	35605766	chr17:35587565-35605766	0	+	35594030	35600985	789624	5	98,60,106,135,62,	0,6442,10664,13371,18139,
#Partially deleted in new
chr17	35587737	35608260	chr17:35587737-35608260	0	+	35594030	35608260	789624	5	156,60,106,136,119,	0,6270,10492,17967,20404,
#Partially deleted in new
chr17	35594030	35600985	chr17:35594030-35600985	1	+	35594030	35600985	789624	3	37,106,49,	0,4199,6906,
#Deleted in new
chr17	35596903	35597128	chr17:35596903-35597128	7	-	35596903	35596903	16724991	1	225,	0,
#Partially deleted in new
chr17	35607836	35626720	chr17:35607836-35626720	0	+	35607836	35607836	8553170	4	219,246,191,100,	0,305,16560,18784,
#Partially deleted in new
chr17	35621274	35670898	chr17:35621274-35670898	0	+	35621274	35621274	8553170	11	89,191,222,121,96,116,166,99,260,193,42,	0,3122,5346,6110,6356,15066,18320,20602,29255,36324,49582,
#Partially deleted in new
chr17	35624581	35657615	chr17:35624581-35657615	0	+	35624581	35650614	789624	8	6,96,116,166,99,187,92,17,	0,3049,11759,15013,17295,26021,26332,33017,
#Partially deleted in new
chr17	35650649	35660120	chr17:35650649-35660120	0	+	35650649	35659976	789624	3	140,193,357,	0,6949,9114,
#Partially deleted in new
chr17	35713790	35838553	chr17:35713790-35838553	0	+	35713790	35713790	8553170	4	6,334,110,130,	0,120474,122341,124633,
#Partially deleted in new
chr17	35731648	35743521	chr17:35731648-35743521	3	+	35735184	35741305	789624	4	230,363,125,2487,	0,3389,8760,9386,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	35735336	35737072	chr17:35735336-35737072	0	+	35735336	35735336	8553170	2	64,297,	0,1439,
#Partially deleted in new
chr17	35744510	35752878	chr17:35744510-35752878	3	-	35744853	35752850	789624	6	1901,253,97,108,242,413,	0,2505,3338,4599,5566,7955,
#Partially deleted in new
chr17	35744815	35752878	chr17:35744815-35752878	1	-	35744853	35752850	789624	7	1596,253,97,108,30,164,413,	0,2200,3033,4294,5261,5339,7650,
#Partially deleted in new
chr17	35744822	35752878	chr17:35744822-35752878	1	-	35749155	35752850	789624	7	1589,253,97,108,30,165,413,	0,2193,3026,4287,5254,5331,7643,
#Partially deleted in new
chr17	35756248	35768326	chr17:35756248-35768326	0	-	35756414	35768326	789624	3	171,168,97,	0,11503,11981,
#Partially deleted in new
chr17	35756249	35795707	chr17:35756249-35795707	0	-	35766499	35795377	789624	9	170,698,138,150,246,225,188,80,441,	0,9947,11502,11980,13817,16930,22638,22994,39017,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	35757198	35758325	chr17:35757198-35758325	3	-	35757198	35757198	8553170	2	251,229,	0,898,
#Partially deleted in new
chr17	35760896	35764614	chr17:35760896-35764614	1	+	35760941	35764593	789624	3	58,230,189,	0,3110,3529,
#Partially deleted in new
chr17	35760908	35764597	chr17:35760908-35764597	1	+	35760951	35764593	789624	3	46,351,172,	0,3066,3517,
#Partially deleted in new
chr17	35760909	35765079	chr17:35760909-35765079	3	+	35760941	35764618	789624	3	45,319,654,	0,3097,3516,
#Partially deleted in new
chr17	35766339	35795582	chr17:35766339-35795582	3	-	35766499	35795377	789624	8	555,168,150,246,225,188,80,316,	0,1412,1890,3727,6840,12548,12904,28927,
#Partially deleted in new
chr17	35766339	35795624	chr17:35766339-35795624	1	-	35767021	35795377	789624	9	555,63,168,150,246,225,188,80,358,	0,633,1412,1890,3727,6840,12548,12904,28927,
#Partially deleted in new
chr17	35768314	35779311	chr17:35768314-35779311	0	-	35768314	35779311	789624	4	65,246,188,68,	0,1752,10573,10929,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	35778504	35795707	chr17:35778504-35795707	1	-	35778873	35795377	789624	3	571,80,441,	0,739,16762,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	35778504	35779368	chr17:35778504-35779368	0	-	35778504	35778504	8553170	2	571,125,	0,739,
#Deleted in new
chr17	35808488	35808897	chr17:35808488-35808897	3	-	35808488	35808488	8553170	1	409,	0,
#Partially deleted in new
chr17	35809454	35847242	chr17:35809454-35847242	3	+	35809569	35846945	0	16	122,40,52,85,106,194,121,35,33,110,130,93,82,89,562,337,	0,8261,10569,10709,10877,13185,14623,24452,25111,26677,28969,32912,34622,34825,35022,37451,
#Partially deleted in new
chr17	35809480	35836186	chr17:35809480-35836186	0	+	35809569	35836186	789624	10	96,40,52,76,106,194,121,35,33,55,	0,8235,10543,10683,10851,13159,14597,24426,25085,26651,
#Deleted in new
chr17	35809481	35811584	chr17:35809481-35811584	0	+	35809481	35809481	8553170	1	2103,	0,
#Partially deleted in new
chr17	35809483	35844314	chr17:35809483-35844314	0	+	35820420	35836132	789624	13	133,40,52,85,106,194,121,33,110,130,93,82,35,	0,8232,10540,10680,10848,13156,14594,25082,26648,28940,32883,34593,34796,
#Partially deleted in new
chr17	35809483	35822718	chr17:35809483-35822718	0	+	35820420	35822718	789624	7	93,92,40,52,85,106,79,	0,488,8232,10540,10680,10848,13156,
#Partially deleted in new
chr17	35809483	35847234	chr17:35809483-35847234	1	+	35820420	35847102	789624	19	93,92,78,40,52,85,106,194,121,35,33,110,130,93,82,89,90,159,329,	0,488,7756,8232,10540,10680,10848,13156,14594,24423,25082,26648,28940,32883,34593,34796,34993,35396,37422,
#Partially deleted in new
chr17	35809483	35822757	chr17:35809483-35822757	0	+	35809483	35809483	8553170	5	93,40,52,106,118,	0,8232,10540,10848,13156,
#Partially deleted in new
chr17	35809483	35824112	chr17:35809483-35824112	0	+	35809483	35809483	8553170	5	93,40,414,194,35,	0,8232,10540,13156,14594,
#Partially deleted in new
chr17	35809488	35847234	chr17:35809488-35847234	1	+	35809569	35846945	0	16	88,40,52,76,106,194,121,35,33,110,130,93,82,89,562,329,	0,8227,10535,10675,10843,13151,14589,24418,25077,26643,28935,32878,34588,34791,34988,37417,
#Partially deleted in new
chr17	35809505	35824289	chr17:35809505-35824289	0	+	35809505	35809505	8553170	7	71,40,52,85,106,194,212,	0,8210,10518,10658,10826,13134,14572,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	35816716	35830293	chr17:35816716-35830293	3	-	35816716	35816716	8553170	2	225,263,	0,13314,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	35818398	35823713	chr17:35818398-35823713	3	+	35818398	35818398	8553170	2	316,105,	0,5210,
#Partially deleted in new
chr17	35833523	35842377	chr17:35833523-35842377	0	+	35833523	35833523	8553170	5	418,33,110,130,11,	0,1042,2608,4900,8843,
#Partially deleted in new
chr17	35844076	35847192	chr17:35844076-35847192	0	+	35844076	35846945	789624	5	82,89,252,181,287,	0,203,400,781,2829,
#Partially deleted in new
chr17	35844934	35864615	chr17:35844934-35864615	0	+	35844934	35864268	789624	2	104,552,	0,19129,
#Partially deleted in new
chr17	35854945	35868839	chr17:35854945-35868839	0	-	35854945	35854945	8553170	14	465,87,52,74,120,93,183,131,801,57,133,182,50,185,	0,718,1227,1786,3254,3487,3942,8049,8556,9551,9812,10269,11778,13709,
#Partially deleted in new
chr17	35854950	35868891	chr17:35854950-35868891	3	-	35855062	35868742	789624	15	460,87,52,74,120,93,183,131,58,57,57,133,182,50,237,	0,713,1222,1781,3249,3482,3937,8044,8551,9295,9546,9807,10264,11773,13704,
#Partially deleted in new
chr17	35854955	35868871	chr17:35854955-35868871	1	-	35855062	35868742	789624	15	455,87,52,74,120,93,183,131,58,57,57,13,182,50,217,	0,708,1217,1776,3244,3477,3932,8039,8546,9290,9541,9922,10259,11768,13699,
#Partially deleted in new
chr17	35855001	35868827	chr17:35855001-35868827	0	-	35859018	35868742	789624	15	409,87,52,74,120,93,183,175,58,57,57,133,182,50,173,	0,662,1171,1730,3198,3431,3886,7949,8500,9244,9495,9756,10213,11722,13653,
#Partially deleted in new
chr17	35855380	35868891	chr17:35855380-35868891	0	-	35856338	35866759	789624	16	30,87,185,74,120,93,183,131,58,57,57,13,182,50,135,66,	0,283,792,1351,2819,3052,3507,7614,8121,8865,9116,9497,9834,11343,13186,13445,
#Partially deleted in new
chr17	35855745	35868890	chr17:35855745-35868890	0	-	35856338	35866759	789624	15	5,185,74,120,93,183,131,58,57,57,133,182,50,135,65,	0,427,986,2454,2687,3142,7249,7756,8500,8751,9012,9469,10978,12821,13080,
#Deleted in new
chr17	35861092	35861566	chr17:35861092-35861566	7	-	35861092	35861092	16724991	1	474,	0,
#Deleted in new
chr17	35863935	35864612	chr17:35863935-35864612	0	+	35863935	35863935	8553170	1	677,	0,
#Partially deleted in new
chr17	35864272	35868871	chr17:35864272-35868871	0	-	35864272	35868742	789624	6	30,57,13,182,50,217,	0,224,605,942,2451,4382,
#Partially deleted in new
chr17	35864757	35868863	chr17:35864757-35868863	0	-	35864757	35864757	8553170	4	133,178,50,209,	0,461,1966,3897,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	35868966	35885863	chr17:35868966-35885863	3	+	35868966	35868966	8553170	5	152,154,93,105,158,	0,15415,15720,16541,16739,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	35871490	35880508	chr17:35871490-35880508	1	-	35872376	35880305	0	3	974,112,279,	0,7037,8739,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	35871490	35880793	chr17:35871490-35880793	3	-	35872376	35880305	0	4	974,112,93,65,	0,7037,8739,9238,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	35872001	35880291	chr17:35872001-35880291	0	-	35872269	35880291	789624	4	463,82,112,62,	0,3559,6526,8228,
#Partially deleted in new
chr17	35885561	35885858	chr17:35885561-35885858	0	+	35885561	35885561	8553170	1	297,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	35889557	35889804	chr17:35889557-35889804	3	+	35889557	35889557	8553170	1	247,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	35893706	35911023	chr17:35893706-35911023	3	-	35893706	35893706	8553170	2	617,4856,	0,12461,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	35912634	35918010	chr17:35912634-35918010	7	-	35912634	35912634	16724991	1	5376,	0,
#Partially deleted in new
chr17	35918065	35930727	chr17:35918065-35930727	1	-	35918341	35930727	789624	6	378,86,169,123,180,96,	0,2121,6538,7449,12010,12566,
#Partially deleted in new
chr17	35918065	35930773	chr17:35918065-35930773	3	-	35918341	35930727	789624	7	378,86,99,169,123,180,142,	0,2121,4511,6538,7449,12010,12566,
#Partially deleted in new
chr17	35918079	35930769	chr17:35918079-35930769	1	-	35918341	35930282	789624	6	364,86,99,169,123,694,	0,2107,4497,6524,7435,11996,
#Partially deleted in new
chr17	35918341	35930727	chr17:35918341-35930727	1	-	35918341	35930727	789624	4	102,123,180,96,	0,7173,11734,12290,
#Partially deleted in new
chr17	35918341	35930282	chr17:35918341-35930282	0	-	35922654	35930282	789624	5	102,86,99,123,207,	0,1845,4235,7173,11734,
#Partially deleted in new
chr17	35918341	35930727	chr17:35918341-35930727	0	-	35920257	35930727	789624	5	102,86,123,180,96,	0,1845,7173,11734,12290,
#Partially deleted in new
chr17	35918341	35930282	chr17:35918341-35930282	1	-	35918341	35930282	789624	3	102,123,207,	0,7173,11734,
#Partially deleted in new
chr17	35918341	35930282	chr17:35918341-35930282	0	-	35920257	35930282	789624	4	102,86,123,207,	0,1845,7173,11734,
#Partially deleted in new
chr17	35918341	35930727	chr17:35918341-35930727	0	-	35922654	35930727	789624	6	102,86,99,123,180,96,	0,1845,4235,7173,11734,12290,
#Partially deleted in new
chr17	35918341	35930727	chr17:35918341-35930727	0	-	35922654	35930727	789624	5	102,86,99,123,96,	0,1845,4235,7173,12290,
#Partially deleted in new
chr17	35918341	35930282	chr17:35918341-35930282	1	-	35918341	35930282	789624	5	102,86,169,123,207,	0,1845,6262,7173,11734,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	35922154	35930753	chr17:35922154-35930753	1	-	35922532	35930282	789624	4	521,169,123,678,	0,2449,3360,7921,
#Partially deleted in new
chr17	35922477	35930740	chr17:35922477-35930740	1	-	35922532	35930727	789624	5	198,169,123,180,109,	0,2126,3037,7598,8154,
#Partially deleted in new
chr17	35922480	35930299	chr17:35922480-35930299	1	-	35922654	35930282	789624	3	195,123,224,	0,3034,7595,
#Partially deleted in new
chr17	35922654	35930727	chr17:35922654-35930727	1	-	35922654	35930727	789624	4	21,123,180,96,	0,2860,7421,7977,
#Partially deleted in new
chr17	35934517	35943670	chr17:35934517-35943670	1	-	35934795	35939356	789624	5	348,79,159,227,104,	0,2237,3240,4700,9049,
#Partially deleted in new
chr17	35934530	35943699	chr17:35934530-35943699	3	-	35934795	35939356	789624	5	335,79,159,341,133,	0,2224,3227,4687,9036,
#Partially deleted in new
chr17	35936688	35939262	chr17:35936688-35939262	0	-	35936750	35939262	789624	3	118,159,45,	0,1069,2529,
#Partially deleted in new
chr17	35963487	35965472	chr17:35963487-35965472	7	-	35963487	35963487	16724991	2	124,283,	0,1702,
#Partially deleted in new
chr17	35963511	35965471	chr17:35963511-35965471	5	-	35963511	35963511	16724991	2	100,282,	0,1678,
#Partially deleted in new
chr17	35976492	35978263	chr17:35976492-35978263	0	-	35977565	35978263	789624	3	207,359,121,	0,880,1650,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	35976498	35981496	chr17:35976498-35981496	3	-	35977565	35981420	0	3	1233,121,152,	0,1644,4846,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	35976567	35981461	chr17:35976567-35981461	0	-	35980407	35981420	789624	5	1164,121,96,136,117,	0,1575,2305,3790,4777,
#Deleted in new
chr17	35983290	35987004	chr17:35983290-35987004	1	-	35983800	35984597	789624	2	598,2667,	0,1047,
#Deleted in new
chr17	35983293	35986758	chr17:35983293-35986758	3	-	35983800	35986649	0	3	595,115,188,	0,1044,3277,
#Partially deleted in new
chr17	35983655	36001551	chr17:35983655-36001551	0	-	35997766	36001492	789624	8	233,115,48,134,140,112,60,135,	0,682,2092,2915,14065,14624,15210,17761,
#Partially deleted in new
chr17	35983655	36001621	chr17:35983655-36001621	3	-	35997766	36001492	789624	7	233,115,134,140,112,60,205,	0,682,2915,14065,14624,15210,17761,
#Deleted in new
chr17	35983655	35986710	chr17:35983655-35986710	0	+	35983655	35983655	8553170	2	74,97,	0,2958,
#Deleted in new
chr17	35983658	35986649	chr17:35983658-35986649	1	-	35983800	35986649	0	4	230,115,48,79,	0,679,2089,2912,
#Deleted in new
chr17	35983686	35986675	chr17:35983686-35986675	1	-	35984333	35986649	789624	3	202,119,105,	0,647,2884,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	35985584	35990270	chr17:35985584-35990270	3	+	35985584	35985584	8553170	2	141,3737,	0,949,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	35996439	35998370	chr17:35996439-35998370	0	-	35997766	35998370	789624	3	487,140,91,	0,1281,1840,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	35997581	36002038	chr17:35997581-36002038	3	-	35997766	36001492	0	4	279,112,60,622,	0,698,1284,3835,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	36012503	36012891	chr17:36012503-36012891	3	+	36012503	36012503	8553170	1	388,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	36013055	36017962	chr17:36013055-36017962	1	-	36013196	36017897	0	4	253,115,60,141,	0,688,1278,4766,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	36013056	36013781	chr17:36013056-36013781	0	-	36013739	36013781	789624	2	252,150,	0,575,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	36013057	36017968	chr17:36013057-36017968	3	-	36013196	36017897	0	4	251,166,60,147,	0,686,1276,4764,
#Partially deleted in new
chr17	36064279	36072032	chr17:36064279-36072032	3	+	36064342	36071041	0	3	130,112,1082,	0,6167,6671,
#Deleted in new
chr17	36070373	36071481	chr17:36070373-36071481	0	+	36070373	36070373	8553170	2	185,531,	0,577,
#Partially deleted in new
chr17	36081633	36089862	chr17:36081633-36089862	0	+	36081633	36081633	8553170	2	76,317,	0,7912,
#Deleted in new
chr17	36088255	36090141	chr17:36088255-36090141	3	-	36088671	36090058	0	3	507,115,156,	0,927,1730,
#Deleted in new
chr17	36088255	36090169	chr17:36088255-36090169	0	-	36088255	36088255	8553170	2	507,987,	0,927,
#Deleted in new
chr17	36088292	36090134	chr17:36088292-36090134	0	-	36088292	36088292	8553170	2	314,803,	0,1039,
#Deleted in new
chr17	36088292	36090134	chr17:36088292-36090134	1	+	36088292	36088292	8553170	2	319,796,	0,1046,
#Partially deleted in new
chr17	36103589	36105621	chr17:36103589-36105621	3	+	36103905	36105312	0	3	392,115,397,	0,938,1635,
#Partially deleted in new
chr17	36103826	36105621	chr17:36103826-36105621	1	+	36103905	36105307	789624	2	155,397,	0,1398,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	36103840	36105614	chr17:36103840-36105614	0	+	36103840	36103840	8553170	1	1774,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	36110149	36110447	chr17:36110149-36110447	3	+	36110149	36110149	8553170	1	298,	0,
#Deleted in new
chr17	36161606	36162926	chr17:36161606-36162926	7	+	36161606	36161606	16724991	2	133,92,	0,1228,
#Deleted in new
chr17	36165680	36176595	chr17:36165680-36176595	3	-	36165994	36175050	789624	14	883,153,100,66,95,121,49,110,108,81,40,86,73,116,	0,1863,2386,2949,3399,4210,4874,6174,6613,7164,7727,9050,9298,10799,
#Deleted in new
chr17	36170070	36172652	chr17:36170070-36172652	0	-	36170070	36170070	8553170	4	65,49,110,359,	0,484,1784,2223,
#Deleted in new
chr17	36172293	36176636	chr17:36172293-36176636	0	-	36172293	36172883	789624	4	108,81,223,157,	0,551,1114,4186,
#Deleted in new
chr17	36172885	36176592	chr17:36172885-36176592	0	-	36174439	36175050	789624	6	40,40,223,86,73,113,	0,522,1521,1845,2093,3594,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	36176228	36177510	chr17:36176228-36177510	0	+	36176228	36176228	8553170	2	137,316,	0,966,
#Partially deleted in new
chr17	36183234	36188882	chr17:36183234-36188882	1	+	36183234	36183234	8553170	3	385,214,460,	0,4579,5188,
#Partially deleted in new
chr17	36183460	36196456	chr17:36183460-36196456	3	+	36183460	36183460	8553170	2	159,327,	0,12669,
#Partially deleted in new
chr17	36187951	36196471	chr17:36187951-36196471	0	+	36187951	36187951	8553170	2	76,317,	0,8203,
#Deleted in new
chr17	36194868	36196747	chr17:36194868-36196747	0	-	36194868	36194868	8553170	2	508,950,	0,929,
#Deleted in new
chr17	36194868	36196758	chr17:36194868-36196758	3	-	36195285	36196673	789624	3	508,115,161,	0,929,1729,
#Deleted in new
chr17	36194995	36196457	chr17:36194995-36196457	0	-	36194995	36194995	8553170	3	381,115,52,	0,802,1410,
#Deleted in new
chr17	36210923	36212878	chr17:36210923-36212878	1	+	36211141	36212433	789624	3	294,115,545,	0,852,1410,
#Deleted in new
chr17	36211062	36212878	chr17:36211062-36212878	1	+	36211141	36212433	789624	3	155,115,515,	0,713,1301,
#Deleted in new
chr17	36211062	36212878	chr17:36211062-36212878	1	+	36211141	36212423	789624	2	155,586,	0,1230,
#Deleted in new
chr17	36211062	36212878	chr17:36211062-36212878	1	+	36211141	36212423	789624	3	155,115,576,	0,713,1240,
#Deleted in new
chr17	36211062	36212878	chr17:36211062-36212878	1	+	36211141	36211894	789624	2	155,1103,	0,713,
#Deleted in new
chr17	36211062	36212878	chr17:36211062-36212878	1	+	36211141	36212564	789624	2	155,382,	0,1434,
#Deleted in new
chr17	36211062	36212878	chr17:36211062-36212878	1	+	36211141	36212433	789624	3	155,115,566,	0,713,1250,
#Deleted in new
chr17	36211062	36212878	chr17:36211062-36212878	3	+	36211141	36212569	789624	3	155,115,397,	0,713,1419,
#Deleted in new
chr17	36211062	36212878	chr17:36211062-36212878	1	+	36211141	36212569	789624	3	155,115,382,	0,713,1434,
#Deleted in new
chr17	36211062	36212878	chr17:36211062-36212878	1	+	36211141	36212296	789624	3	155,115,586,	0,713,1230,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	36225245	36226807	chr17:36225245-36226807	3	-	36225245	36225245	8553170	2	124,123,	0,1439,
#Deleted in new
chr17	36234446	36234554	chr17:36234446-36234554	7	-	36234446	36234446	16724991	1	108,	0,
#Deleted in new
chr17	36241700	36241806	chr17:36241700-36241806	7	+	36241700	36241700	16724991	1	106,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	36253455	36262985	chr17:36253455-36262985	1	-	36255523	36262985	789624	11	1067,153,95,121,49,110,108,81,40,86,72,	0,2029,3565,4373,5037,6334,6773,7324,7887,9210,9458,
#Deleted in new
chr17	36253638	36264514	chr17:36253638-36264514	1	-	36255523	36262985	789624	12	884,153,95,121,49,110,108,81,40,86,73,100,	0,1846,3382,4190,4854,6151,6590,7141,7704,9027,9275,10776,
#Deleted in new
chr17	36253953	36264553	chr17:36253953-36264553	3	-	36253953	36262985	789624	14	569,153,100,66,95,121,49,110,108,81,40,86,73,139,	0,1531,2054,2617,3067,3875,4539,5836,6275,6826,7389,8712,8960,10461,
#Partially deleted in new
chr17	36274190	36320547	chr17:36274190-36320547	7	+	36274190	36274190	16724991	11	93,78,66,108,246,97,34,115,165,105,61,	0,23118,33106,36484,39246,39893,40118,41004,44526,45765,46296,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	36285311	36285413	chr17:36285311-36285413	3	+	36285311	36285311	8553170	1	102,	0,
#Deleted in new
chr17	36323883	36334759	chr17:36323883-36334759	3	+	36325411	36334444	789624	14	99,73,86,40,81,108,110,49,121,95,66,100,153,884,	0,1527,1762,3131,3653,4177,4614,5972,6564,7398,7877,8406,8876,9992,
#Deleted in new
chr17	36377530	36388423	chr17:36377530-36388423	3	-	36377845	36386895	789624	14	884,153,100,66,95,121,49,110,108,81,40,86,73,99,	0,1865,2388,2951,3401,4209,4873,6170,6609,7160,7723,9045,9293,10794,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	36404825	36404932	chr17:36404825-36404932	3	-	36404825	36404825	8553170	1	107,	0,
#Deleted in new
chr17	36428617	36439566	chr17:36428617-36439566	3	-	36429089	36437981	789624	14	879,153,100,66,95,121,49,110,108,81,40,86,73,156,	0,1860,2383,2946,3396,4204,4868,6168,6607,7158,7721,9044,9292,10793,
#Partially deleted in new
chr17	36450145	36457535	chr17:36450145-36457535	7	-	36450145	36450145	16724991	11	497,153,100,66,95,121,49,110,108,81,46,	0,1478,2001,2564,3014,3822,4486,5783,6224,6782,7344,
#Partially deleted in new
chr17	36486628	36495823	chr17:36486628-36495823	1	+	36495275	36495404	789624	4	157,87,81,601,	0,6184,7297,8594,
#Partially deleted in new
chr17	36486634	36495822	chr17:36486634-36495822	3	+	36486699	36495404	0	5	151,32,87,81,600,	0,300,6178,7291,8588,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	36486677	36499310	chr17:36486677-36499310	0	+	36486677	36486677	789624	4	108,87,81,1705,	0,6135,7248,10928,
#Partially deleted in new
chr17	36486680	36493268	chr17:36486680-36493268	0	+	36486680	36486680	8553170	2	105,456,	0,6132,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	36486693	36497917	chr17:36486693-36497917	0	+	36486699	36492854	789624	4	92,82,81,312,	0,6124,7232,10912,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	36486694	36498148	chr17:36486694-36498148	1	+	36486699	36497766	0	5	91,32,87,81,543,	0,240,6118,7231,10911,
#Partially deleted in new
chr17	36486699	36495822	chr17:36486699-36495822	0	+	36486699	36492828	789624	5	86,32,82,81,600,	0,235,6118,7226,8523,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	36486703	36498342	chr17:36486703-36498342	0	+	36486703	36486703	8553170	2	82,737,	0,10902,
#Partially deleted in new
chr17	36486727	36495748	chr17:36486727-36495748	0	+	36486727	36495404	789624	3	58,32,526,	0,207,8495,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	36489157	36495819	chr17:36489157-36495819	0	+	36489157	36489157	8553170	3	3742,81,597,	0,4768,6065,
#Partially deleted in new
chr17	36491198	36491322	chr17:36491198-36491322	7	-	36491198	36491198	16724991	1	124,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	36492223	36495312	chr17:36492223-36495312	0	+	36495275	36495312	789624	4	236,87,81,90,	0,589,1702,2999,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	36492229	36495363	chr17:36492229-36495363	0	+	36495275	36495363	789624	4	230,87,47,141,	0,583,1730,2993,
#Partially deleted in new
chr17	36495632	36534988	chr17:36495632-36534988	3	-	36496250	36532538	789624	26	774,294,86,130,167,104,71,108,153,177,114,122,74,172,91,77,97,103,70,133,114,149,139,155,152,228,	0,2633,3442,5197,5436,7464,8317,9664,10823,11330,11766,12170,13429,15113,15732,17796,17996,18813,19480,20225,29595,31918,32431,36894,38320,39128,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr17	36495637	36535415	chr17:36495637-36535415	0	-	36505171	36532538	789624	27	769,294,86,130,167,110,104,1228,108,153,177,114,122,74,172,91,77,97,103,70,133,114,149,139,155,152,655,	0,2628,3437,5192,5431,6214,7459,8312,9659,10818,11325,11761,12165,13424,15108,15727,17791,17991,18808,19475,20220,29590,31913,32426,36889,38315,39123,
#Partially deleted in new
chr17	36495639	36535457	chr17:36495639-36535457	0	-	36514534	36532538	789624	19	767,289,177,114,122,74,172,91,122,632,97,103,133,114,149,139,155,152,697,	0,2626,11323,11759,12163,13422,15106,15725,17018,17234,17989,18806,20218,29588,31911,32424,36887,38313,39121,
#Partially deleted in new
chr17	36495754	36534927	chr17:36495754-36534927	1	-	36496250	36532538	789624	22	652,294,86,130,167,104,63,82,74,172,91,77,97,103,70,133,114,149,139,155,152,167,	0,2511,3320,5075,5314,7342,8195,12088,13307,14991,15610,17674,17874,18691,19358,20103,29473,31796,32309,36772,38198,39006,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	36495754	36509922	chr17:36495754-36509922	0	-	36495754	36495754	8553170	13	652,294,86,130,167,50,104,71,108,153,177,114,2120,	0,2511,3320,5075,5314,6097,7342,8195,9542,10701,11208,11644,12048,
#Partially deleted in new
chr17	36495932	36499344	chr17:36495932-36499344	0	-	36495932	36495932	8553170	3	474,294,270,	0,2333,3142,
#Partially deleted in new
chr17	36496184	36498883	chr17:36496184-36498883	0	-	36496184	36496184	8553170	2	222,618,	0,2081,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	36499669	36501768	chr17:36499669-36501768	0	-	36499669	36499669	8553170	2	1290,700,	0,1399,
#Deleted in new
chr17	36501165	36504429	chr17:36501165-36504429	0	-	36501165	36501165	8553170	3	70,104,480,	0,1931,2784,
#Deleted in new
chr17	36502814	36504132	chr17:36502814-36504132	0	-	36502814	36502814	8553170	2	386,183,	0,1135,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	36504901	36506806	chr17:36504901-36506806	0	-	36504901	36504901	8553170	2	503,351,	0,1554,
#Deleted in new
chr17	36505154	36507107	chr17:36505154-36507107	0	-	36505154	36505154	8553170	3	250,153,145,	0,1301,1808,
#Deleted in new
chr17	36505396	36507617	chr17:36505396-36507617	0	-	36505396	36505396	8553170	4	8,153,177,219,	0,1059,1566,2002,
#Partially deleted in new
chr17	36507422	36510853	chr17:36507422-36510853	0	-	36508915	36510853	789624	4	90,122,239,108,	0,380,1474,3323,
#Partially deleted in new
chr17	36507832	36513457	chr17:36507832-36513457	0	-	36512761	36513457	789624	6	92,74,172,91,122,29,	0,1229,2913,3532,4825,5596,
#Partially deleted in new
chr17	36509066	36511258	chr17:36509066-36511258	0	-	36509066	36509066	8553170	2	69,513,	0,1679,
#Partially deleted in new
chr17	36511206	36514487	chr17:36511206-36514487	0	-	36511206	36511206	8553170	4	249,77,97,42,	0,2222,2422,3239,
#Partially deleted in new
chr17	36513085	36534868	chr17:36513085-36534868	1	-	36513368	36532538	789624	11	420,97,103,70,133,114,149,139,155,152,108,	0,543,1360,2027,2772,12142,14465,14978,19441,20867,21675,
#Partially deleted in new
chr17	36513165	36534896	chr17:36513165-36534896	1	-	36513368	36532538	789624	8	340,97,103,70,133,155,152,136,	0,463,1280,1947,2692,19361,20787,21595,
#Partially deleted in new
chr17	36515874	36534810	chr17:36515874-36534810	0	-	36515874	36532538	789624	7	116,114,149,139,155,152,138,	0,9353,11676,12189,16652,18078,18798,
#Partially deleted in new
chr17	36515917	36534219	chr17:36515917-36534219	0	-	36515917	36532538	789624	6	73,114,149,139,155,267,	0,9310,11633,12146,16609,18035,
#Partially deleted in new
chr17	36527653	36534790	chr17:36527653-36534790	0	-	36527653	36532538	789624	6	46,139,155,264,152,30,	0,410,4873,5506,6299,7107,
#Partially deleted in new
chr17	36528080	36534810	chr17:36528080-36534810	0	-	36528080	36532538	789624	4	122,155,152,127,	0,4446,5872,6603,
#Deleted in new
chr17	36532647	36534219	chr17:36532647-36534219	0	-	36532647	36532647	8553170	3	34,264,267,	0,512,1305,
#Deleted in new
chr17	36533291	36534865	chr17:36533291-36534865	0	-	36533291	36533291	8553170	3	317,152,105,	0,661,1469,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	36533921	36543435	chr17:36533921-36543435	0	-	36533921	36533921	8553170	3	183,85,310,	0,8159,9204,
#Partially deleted in new
chr17	36535019	36537934	chr17:36535019-36537934	0	+	36537101	36537934	789624	2	35,841,	0,2074,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	36535041	36538854	chr17:36535041-36538854	3	+	36537101	36538616	789624	2	551,1761,	0,2052,
#Partially deleted in new
chr17	36535251	36542243	chr17:36535251-36542243	0	-	36535251	36535251	8553170	2	382,163,	0,6829,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	36535554	36539310	chr17:36535554-36539310	1	+	36537101	36538616	789624	2	47,2217,	0,1539,
#Partially deleted in new
chr17	36544887	36589848	chr17:36544887-36589848	3	+	36545724	36589411	789624	14	210,199,81,254,99,114,204,175,195,151,126,149,249,641,	0,731,9932,12195,15885,22775,33095,34357,36456,40412,40952,41162,42109,44320,
#Deleted in new
chr17	36544911	36547747	chr17:36544911-36547747	1	+	36545724	36545931	789624	2	186,2129,	0,707,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	36544918	36582477	chr17:36544918-36582477	0	+	36544918	36544918	8553170	8	179,199,81,254,99,114,1437,1134,	0,700,9901,12164,15854,22744,33064,36425,
#Partially deleted in new
chr17	36544931	36586158	chr17:36544931-36586158	0	+	36544931	36544931	8553170	10	166,199,81,254,99,114,204,175,195,859,	0,687,9888,12151,15841,22731,33051,34313,36412,40368,
#Partially deleted in new
chr17	36545503	36560818	chr17:36545503-36560818	0	+	36545724	36560818	789624	4	314,81,254,46,	0,9316,11579,15269,
#Deleted in new
chr17	36574461	36575325	chr17:36574461-36575325	7	-	36574461	36574461	16724991	1	864,	0,
#Partially deleted in new
chr17	36576656	36586153	chr17:36576656-36586153	0	+	36576656	36576656	8553170	6	1530,175,195,151,126,104,	0,2588,4687,8643,9183,9393,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	36585892	36586827	chr17:36585892-36586827	0	+	36585892	36585892	8553170	2	73,778,	0,157,
#Partially deleted in new
chr17	36586133	36587596	chr17:36586133-36587596	0	+	36586133	36587332	789624	2	65,600,	0,863,
#Partially deleted in new
chr17	36586935	36589577	chr17:36586935-36589577	0	+	36586935	36586935	8553170	2	310,370,	0,2272,
#Partially deleted in new
chr17	36591797	36600806	chr17:36591797-36600806	3	+	36592009	36600203	0	7	359,210,95,130,93,66,645,	0,3173,6365,7123,7873,8174,8364,
#Partially deleted in new
chr17	36591881	36600804	chr17:36591881-36600804	1	+	36595060	36600203	0	7	107,207,95,130,93,66,643,	0,3092,6281,7039,7789,8090,8280,
#Partially deleted in new
chr17	36591886	36599777	chr17:36591886-36599777	0	+	36592009	36595032	789624	5	270,154,95,130,107,	0,3140,6276,7034,7784,
#Partially deleted in new
chr17	36591914	36597013	chr17:36591914-36597013	0	+	36591914	36591914	8553170	3	242,210,186,	0,3056,4913,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	36594586	36599985	chr17:36594586-36599985	0	+	36595060	36599985	789624	5	594,95,130,93,14,	0,3576,4334,5084,5385,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	36596297	36600802	chr17:36596297-36600802	0	+	36596297	36596297	8553170	1	4505,	0,
#Deleted in new
chr17	36598165	36600756	chr17:36598165-36600756	0	+	36598165	36600203	789624	4	92,130,66,595,	0,755,1806,1996,
#Deleted in new
chr17	36599693	36600793	chr17:36599693-36600793	0	+	36599693	36599693	8553170	2	344,632,	0,468,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	36601571	36608971	chr17:36601571-36608971	3	+	36601810	36608415	789624	5	781,94,133,120,729,	0,981,6098,6327,6671,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	36601961	36608964	chr17:36601961-36608964	1	+	36602595	36608415	789624	5	215,94,133,120,722,	0,591,5708,5937,6281,
#Deleted in new
chr17	36634068	36634698	chr17:36634068-36634698	3	+	36634068	36634068	8553170	1	630,	0,
#Deleted in new
chr17	36684753	36685129	chr17:36684753-36685129	3	+	36684753	36684753	8553170	1	376,	0,
#Partially deleted in new
chr17	36722582	36726340	chr17:36722582-36726340	3	+	36722582	36722582	8553170	3	226,33,196,	0,2765,3562,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	36861673	36936661	chr17:36861673-36936661	3	-	36861673	36861673	789624	3	289,103,98,	0,1343,74890,
#Partially deleted in new
chr17	36906994	36936658	chr17:36906994-36936658	0	-	36906994	36906994	789624	2	545,95,	0,29569,
#Partially deleted in new
chr17	36907287	36936652	chr17:36907287-36936652	1	-	36907287	36907287	789624	4	252,106,193,89,	0,20412,25916,29276,
#Deleted in new
chr17	36932108	36936622	chr17:36932108-36936622	1	-	36932108	36932108	789624	2	1403,59,	0,4455,
#Deleted in new
chr17	36936784	36937846	chr17:36936784-36937846	0	+	36936784	36936784	8553170	2	461,108,	0,954,
#Deleted in new
chr17	36937474	36944612	chr17:36937474-36944612	3	+	36938197	36943131	789624	5	893,227,278,166,1861,	0,2815,3135,4725,5277,
#Deleted in new
chr17	36937634	36941531	chr17:36937634-36941531	0	+	36937634	36937634	8553170	3	733,227,880,	0,2655,3017,
#Deleted in new
chr17	36938459	36941394	chr17:36938459-36941394	0	+	36938459	36938459	8553170	3	352,227,785,	0,1830,2150,
#Deleted in new
chr17	36940048	36943456	chr17:36940048-36943456	3	-	36940048	36940048	8553170	2	177,367,	0,3041,
#Deleted in new
chr17	36942297	36943685	chr17:36942297-36943685	0	+	36942297	36943597	789624	2	68,444,	0,944,
#Partially deleted in new
chr17	36948874	37056871	chr17:36948874-37056871	3	+	36949125	37056664	0	12	342,192,411,138,115,202,165,84,68,81,72,271,	0,1339,4011,4895,37742,39644,40372,41899,70130,72059,82739,107726,
#Partially deleted in new
chr17	36949018	36988692	chr17:36949018-36988692	0	+	36949125	36953823	789624	5	198,51,110,115,174,	0,1195,4779,37598,39500,
#Deleted in new
chr17	36980166	36980422	chr17:36980166-36980422	3	+	36980166	36980166	8553170	1	256,	0,
#Partially deleted in new
chr17	36988657	37021154	chr17:36988657-37021154	0	+	36988657	37021018	789624	5	63,165,84,68,221,	0,589,2116,30347,32276,
#Partially deleted in new
chr17	36990774	37056870	chr17:36990774-37056870	0	+	36990774	37056664	789624	4	83,68,81,270,	0,28230,30159,65826,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	36998597	37000034	chr17:36998597-37000034	3	+	36998597	36998597	8553170	2	601,109,	0,1328,
#Partially deleted in new
chr17	37018950	37056871	chr17:37018950-37056871	0	+	37018950	37018950	8553170	3	122,81,271,	0,1983,37650,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	37031364	37056865	chr17:37031364-37056865	0	+	37031364	37031364	8553170	2	321,265,	0,25236,
#Deleted in new
chr17	37033744	37033813	chr17:37033744-37033813	3	+	37033744	37033744	5263520	1	69,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	37034667	37043252	chr17:37034667-37043252	3	+	37034667	37034667	8553170	2	177,234,	0,8351,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	37045461	37052775	chr17:37045461-37052775	3	-	37045461	37045461	8553170	3	118,79,521,	0,428,6793,
#Partially deleted in new
chr17	37051134	37056869	chr17:37051134-37056869	0	+	37051134	37051134	8553170	2	107,269,	0,5466,
#Deleted in new
chr17	37054464	37056858	chr17:37054464-37056858	0	+	37054464	37054464	8553170	2	249,258,	0,2136,
#Deleted in new
chr17	37054826	37056870	chr17:37054826-37056870	0	+	37054826	37054826	8553170	1	2044,	0,
#Partially deleted in new
chr17	37084987	37406780	chr17:37084987-37406780	1	-	37087315	37406299	0	56	2452,137,171,155,113,178,136,97,97,121,144,111,121,98,270,147,156,204,156,216,42,45,57,108,97,144,24,119,90,114,114,125,89,101,189,147,135,151,146,82,104,151,164,162,171,210,111,107,99,82,110,139,133,253,47,519,	0,3950,12008,12842,26543,28100,36367,37543,40710,44377,45087,64876,66313,70695,76793,94272,96213,103289,106132,107102,108386,115151,115439,120777,121795,122669,125479,136736,138524,140004,141351,149987,155488,156965,158383,159600,160092,161838,163023,163605,167017,167898,172715,173224,174372,178697,185763,189205,190963,192045,192908,198279,199850,245185,254816,321274,
#Partially deleted in new
chr17	37084993	37299767	chr17:37084993-37299767	1	-	37087315	37299332	0	54	2446,137,171,155,113,178,136,97,97,121,144,111,121,98,270,147,156,204,156,216,42,45,57,108,97,144,24,119,90,114,114,125,89,101,189,147,135,151,146,82,104,151,164,162,171,210,111,107,99,82,110,139,133,488,	0,3944,12002,12836,26537,28094,36361,37537,40704,44371,45081,64870,66307,70689,76787,94266,96207,103283,106126,107096,108380,115145,115433,120771,121789,122663,125473,136730,138518,139998,141345,149981,155482,156959,158377,159594,160086,161832,163017,163599,167011,167892,172709,173218,174366,178691,185757,189199,190957,192039,192902,198273,199844,214286,
#Partially deleted in new
chr17	37084993	37359116	chr17:37084993-37359116	3	-	37087315	37330399	0	56	2446,137,171,155,113,178,136,97,97,121,144,111,121,98,270,147,156,204,156,216,42,45,57,108,97,144,24,119,90,114,114,125,89,101,189,147,135,151,146,82,104,151,164,162,171,210,111,107,99,82,110,139,133,253,47,118,	0,3944,12002,12836,26537,28094,36361,37537,40704,44371,45081,64870,66307,70689,76787,94266,96207,103283,106126,107096,108380,115145,115433,120771,121789,122663,125473,136730,138518,139998,141345,149981,155482,156959,158377,159594,160086,161832,163017,163599,167011,167892,172709,173218,174366,178691,185757,189199,190957,192039,192902,198273,199844,245179,254810,274005,
#Partially deleted in new
chr17	37084997	37205812	chr17:37084997-37205812	0	-	37087315	37205812	789624	23	2442,137,171,155,113,178,136,97,97,121,144,111,121,98,270,156,204,156,216,42,45,57,48,	0,3940,11998,12832,26533,28090,36357,37533,40700,44367,45077,64866,66303,70685,76783,96203,103279,106122,107092,108376,115141,115429,120767,
#Partially deleted in new
chr17	37086816	37299767	chr17:37086816-37299767	1	-	37087315	37284963	0	55	623,137,171,155,113,178,136,97,97,121,144,111,121,98,270,147,156,204,156,216,42,45,57,108,97,144,24,119,90,114,114,125,89,101,189,147,135,151,146,82,104,151,164,162,171,210,111,107,99,82,110,139,133,111,488,	0,2121,10179,11013,24714,26271,34538,35714,38881,42548,43258,63047,64484,68866,74964,92443,94384,101460,104303,105273,106557,113322,113610,118948,119966,120840,123650,134907,136695,138175,139522,148158,153659,155136,156554,157771,158263,160009,161194,161776,165188,166069,170886,171395,172543,176868,183934,187376,189134,190216,191079,196450,198021,202601,212463,
#Partially deleted in new
chr17	37086875	37161835	chr17:37086875-37161835	0	-	37149970	37161835	789624	14	564,137,171,155,113,178,136,97,97,121,144,111,98,55,	0,2062,10120,10954,24655,26212,34479,35655,38822,42489,43199,62988,68807,74905,
#Deleted in new
chr17	37086879	37088983	chr17:37086879-37088983	0	-	37087052	37088983	789624	3	297,120,46,	0,440,2058,
#Partially deleted in new
chr17	37087221	37122794	chr17:37087221-37122794	0	-	37087221	37087221	8553170	8	218,137,171,155,113,178,136,264,	0,1716,9774,10608,24309,25866,34133,35309,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	37140610	37141424	chr17:37140610-37141424	7	-	37140610	37140610	16724991	1	814,	0,
#Deleted in new
chr17	37143606	37144291	chr17:37143606-37144291	7	-	37143606	37143606	16724991	1	685,	0,
#Deleted in new
chr17	37144135	37144463	chr17:37144135-37144463	5	-	37144135	37144135	16724991	1	328,	0,
#Partially deleted in new
chr17	37161599	37188294	chr17:37161599-37188294	0	-	37161599	37161599	8553170	4	451,147,156,18,	0,17660,19601,26677,
#Partially deleted in new
chr17	37162615	37163139	chr17:37162615-37163139	7	+	37162615	37162615	16724991	1	524,	0,
#Partially deleted in new
chr17	37188302	37193458	chr17:37188302-37193458	0	-	37188302	37188302	8553170	4	178,156,216,85,	0,2817,3787,5071,
#Partially deleted in new
chr17	37200428	37222028	chr17:37200428-37222028	0	-	37200428	37200428	8553170	7	55,108,97,144,24,119,44,	0,5336,6354,7228,10038,21295,21556,
#Partially deleted in new
chr17	37207729	37225571	chr17:37207729-37225571	0	-	37207729	37207729	8553170	5	71,119,90,114,172,	0,13994,15782,17262,17670,
#Partially deleted in new
chr17	37221517	37359121	chr17:37221517-37359121	0	-	37221517	37221517	8553170	29	325,90,114,114,125,89,101,189,147,135,151,146,82,104,151,164,162,171,210,111,107,99,82,110,139,133,253,47,123,	0,1994,3474,4821,13457,18958,20435,21853,23070,23562,25308,26493,27075,30487,31368,36185,36694,37842,42167,49233,52675,54433,55515,56378,61749,63320,108655,118286,137481,
#Deleted in new
chr17	37247901	37248676	chr17:37247901-37248676	0	-	37247901	37247901	8553170	2	255,84,	0,691,
#Partially deleted in new
chr17	37274216	37406672	chr17:37274216-37406672	0	-	37289521	37406299	789624	10	83,99,82,110,139,133,111,253,47,411,	0,1734,2816,3679,9050,10621,15201,55956,65587,132045,
#Partially deleted in new
chr17	37277987	37359096	chr17:37277987-37359096	0	-	37277987	37284963	789624	5	18,139,133,163,98,	0,5279,6850,52185,81011,
#Partially deleted in new
chr17	37284837	37359116	chr17:37284837-37359116	0	-	37284837	37284963	789624	5	133,111,253,47,118,	0,4580,45335,54966,74161,
#Partially deleted in new
chr17	37284837	37406780	chr17:37284837-37406780	0	-	37289521	37406299	789624	5	133,111,253,47,519,	0,4580,45335,54966,121424,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	37328644	37330399	chr17:37328644-37330399	1	-	37328874	37330399	789624	2	342,227,	0,1528,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	37328961	37365568	chr17:37328961-37365568	0	-	37328961	37330399	789624	4	25,253,47,126,	0,1211,10842,36481,
#Partially deleted in new
chr17	37360204	37368727	chr17:37360204-37368727	0	-	37360204	37360204	8553170	4	187,308,131,29,	0,5238,7387,8494,
#Partially deleted in new
chr17	37360232	37406818	chr17:37360232-37406818	0	-	37360232	37360232	8553170	2	159,557,	0,46029,
#Partially deleted in new
chr17	37375985	37392706	chr17:37375985-37392706	1	+	37376092	37389334	789624	5	165,87,246,117,1060,	0,1893,3151,13260,15661,
#Partially deleted in new
chr17	37376042	37392708	chr17:37376042-37392708	3	+	37376092	37391724	789624	7	108,87,246,117,125,117,1062,	0,1836,3094,9966,12627,13203,15604,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	37386885	37387926	chr17:37386885-37387926	3	+	37386885	37386885	8553170	2	59,676,	0,365,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr17	37406873	37479730	chr17:37406873-37479730	3	+	37411365	37476982	789624	16	76,122,107,60,92,158,89,73,64,44,111,72,133,44,74,2934,	0,4395,16635,20076,30864,33631,35690,37822,51650,55204,58557,60580,63526,64220,67682,69923,
#Partially deleted in new
chr17	37406885	37438073	chr17:37406885-37438073	0	+	37406885	37406885	8553170	5	64,122,107,60,336,	0,4383,16623,20064,30852,
#Partially deleted in new
chr17	37406885	37442617	chr17:37406885-37442617	0	+	37411365	37442617	789624	6	64,122,107,60,154,54,	0,4383,16623,20064,33623,35678,
#Partially deleted in new
chr17	37406889	37465471	chr17:37406889-37465471	0	+	37411365	37437833	789624	11	60,122,107,60,185,158,89,73,64,44,41,	0,4379,16619,20060,30848,33615,35674,37806,51634,55188,58541,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr17	37406889	37478267	chr17:37406889-37478267	0	+	37411365	37476982	789624	17	60,122,107,60,92,158,89,73,64,44,111,72,133,44,74,694,214,	0,4379,16619,20060,30848,33615,35674,37806,51634,55188,58541,60564,63510,64204,67666,69907,71164,
#Partially deleted in new
chr17	37406906	37437955	chr17:37406906-37437955	0	+	37406906	37406906	8553170	4	43,122,107,218,	0,4362,16602,30831,
#Partially deleted in new
chr17	37406938	37465653	chr17:37406938-37465653	1	+	37411365	37465636	789624	11	11,122,107,60,92,158,89,73,64,44,223,	0,4330,16570,20011,30799,33566,35625,37757,51585,55139,58492,
#Partially deleted in new
chr17	37407223	37477228	chr17:37407223-37477228	1	+	37411365	37476982	789624	16	273,122,107,60,92,158,89,73,64,44,111,72,133,44,74,432,	0,4045,16285,19726,30514,33281,35340,37472,51300,54854,58207,60230,63176,63870,67332,69573,
#Partially deleted in new
chr17	37407247	37440579	chr17:37407247-37440579	0	+	37427006	37440579	789624	5	249,122,60,92,75,	0,4021,19702,30490,33257,
#Partially deleted in new
chr17	37407313	37465541	chr17:37407313-37465541	0	+	37437785	37465541	789624	9	183,19,63,158,89,73,64,44,111,	0,3955,30453,33191,35250,37382,51210,54764,58117,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	37407935	37408594	chr17:37407935-37408594	3	-	37407935	37407935	8553170	2	65,228,	0,431,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	37423567	37426666	chr17:37423567-37426666	0	+	37423567	37423567	8553170	2	48,316,	0,2783,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	37436386	37471109	chr17:37436386-37471109	0	+	37436386	37436386	8553170	11	115,225,154,89,73,64,44,111,72,133,16,	0,1351,4122,6177,8309,22137,25691,29044,31067,34013,34707,
#Partially deleted in new
chr17	37437736	37476850	chr17:37437736-37476850	0	+	37437736	37444697	789624	11	93,158,73,64,44,111,72,133,44,74,54,	0,2768,6959,20787,24341,27694,29717,32663,33357,36819,39060,
#Partially deleted in new
chr17	37450564	37476956	chr17:37450564-37476956	0	+	37450564	37450564	8553170	9	82,64,44,111,72,133,44,74,160,	0,7959,11513,14866,16889,19835,20529,23991,26232,
#Partially deleted in new
chr17	37454170	37454931	chr17:37454170-37454931	7	+	37454170	37454170	16724991	2	122,321,	0,440,
#Partially deleted in new
chr17	37461819	37470497	chr17:37461819-37470497	0	+	37461819	37461819	8553170	4	302,111,72,98,	0,3611,5634,8580,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	37477418	37478442	chr17:37477418-37478442	0	+	37477418	37477418	8553170	2	147,417,	0,607,
#Partially deleted in new
chr17	37489830	37513501	chr17:37489830-37513501	3	+	37512272	37512869	0	3	128,88,1321,	0,20846,22350,
#Partially deleted in new
chr17	37491463	37513487	chr17:37491463-37513487	1	+	37512272	37512869	0	3	164,88,1307,	0,19213,20717,
#Partially deleted in new
chr17	37509878	37513501	chr17:37509878-37513501	1	+	37512272	37512869	0	2	886,1321,	0,2302,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr17	37514796	37609496	chr17:37514796-37609496	3	-	37518939	37609355	0	22	4275,36,111,149,97,54,164,594,945,63,119,134,249,197,78,234,112,106,131,122,41,218,	0,5382,5741,21182,23527,24395,25583,27175,38318,46398,46674,53994,55840,56994,61544,62583,69851,70528,71622,81426,85566,94482,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	37515444	37517342	chr17:37515444-37517342	0	-	37515444	37515444	8553170	2	124,156,	0,1742,
#Partially deleted in new
chr17	37517829	37609411	chr17:37517829-37609411	1	-	37518939	37609355	0	20	1242,111,149,97,54,164,594,945,63,119,134,249,197,78,112,106,131,122,41,133,	0,2708,18149,20494,21362,22550,24142,35285,43365,43641,50961,52807,53961,58511,66818,67495,68589,78393,82533,91449,
#Partially deleted in new
chr17	37518460	37609386	chr17:37518460-37609386	1	-	37518939	37609355	0	20	611,111,149,97,54,164,459,945,63,119,134,249,197,78,112,106,131,122,41,108,	0,2077,17518,19863,20731,21919,23511,34654,42734,43010,50330,52176,53330,57880,66187,66864,67958,77762,81902,90818,
#Partially deleted in new
chr17	37518886	37609381	chr17:37518886-37609381	1	-	37518939	37609355	0	20	185,36,111,149,97,54,164,459,945,63,119,134,197,78,112,106,131,122,41,103,	0,1292,1651,17092,19437,20305,21493,23085,34228,42308,42584,49904,52904,57454,65761,66438,67532,77336,81476,90392,
#Partially deleted in new
chr17	37518886	37609381	chr17:37518886-37609381	1	-	37518939	37609355	0	21	185,36,111,149,97,54,164,594,945,63,119,134,249,197,78,112,106,131,119,41,103,	0,1292,1651,17092,19437,20305,21493,23085,34228,42308,42584,49904,51750,52904,57454,65761,66438,67532,77336,81476,90392,
#Partially deleted in new
chr17	37518886	37609381	chr17:37518886-37609381	1	-	37518939	37609355	0	22	185,36,111,69,149,97,54,164,594,945,63,119,134,249,197,78,112,106,131,122,41,103,	0,1292,1651,10896,17092,19437,20305,21493,23085,34228,42308,42584,49904,51750,52904,57454,65761,66438,67532,77336,81476,90392,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	37519009	37537478	chr17:37519009-37537478	0	-	37519009	37519009	8553170	3	62,111,1500,	0,1528,16969,
#Partially deleted in new
chr17	37536085	37542386	chr17:37536085-37542386	0	-	37536085	37542386	789624	5	42,97,54,101,415,	0,2238,3106,4294,5886,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	37540625	37576480	chr17:37540625-37576480	0	-	37540625	37540625	8553170	8	1802,945,63,119,134,249,197,140,	0,12489,20569,20845,28165,30011,31165,35715,
#Partially deleted in new
chr17	37553415	37579416	chr17:37553415-37579416	0	-	37553415	37553415	8553170	8	644,63,119,134,249,197,78,285,	0,7779,8055,15375,17221,18375,22925,25716,
#Partially deleted in new
chr17	37553986	37568920	chr17:37553986-37568920	0	-	37553986	37553986	8553170	5	73,64,63,119,130,	0,3153,7208,7484,14804,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	37566848	37600988	chr17:37566848-37600988	0	-	37566848	37566848	8553170	11	2076,249,197,78,234,303,112,106,131,122,626,	0,3788,4942,9492,10531,12283,17799,18476,19570,29374,33514,
#Partially deleted in new
chr17	37571832	37609438	chr17:37571832-37609438	0	-	37571832	37571832	8553170	10	155,78,167,303,112,106,131,122,41,160,	0,4508,5614,7299,12815,13492,14586,24390,28530,37446,
#Deleted in new
chr17	37584321	37585413	chr17:37584321-37585413	0	-	37584525	37585413	789624	2	438,89,	0,1003,
#Partially deleted in new
chr17	37585341	37609472	chr17:37585341-37609472	0	-	37585341	37600399	789624	5	89,131,119,41,105,	0,1077,10881,15021,24026,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	37609738	37621173	chr17:37609738-37621173	0	-	37614295	37621173	789624	6	419,2244,93,72,76,47,	0,2371,8553,10029,11134,11388,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	37609738	37613841	chr17:37609738-37613841	3	+	37609738	37609738	8553170	2	430,78,	0,4025,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	37609777	37643464	chr17:37609777-37643464	3	-	37614295	37643420	0	15	4576,93,72,76,151,123,91,204,73,112,144,186,131,199,131,	0,8514,9990,11095,11349,11620,14566,16117,17010,18783,20252,22335,23510,32332,33556,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr17	37613112	37643445	chr17:37613112-37643445	0	-	37639515	37643420	789624	16	1241,93,72,76,151,123,91,204,73,112,144,186,131,115,199,112,	0,5179,6655,7760,8014,8285,11231,12782,13675,15448,16917,19000,20175,26341,28997,30221,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	37613754	37643418	chr17:37613754-37643418	0	-	37613754	37613754	8553170	13	599,93,1510,123,91,204,73,112,144,186,131,199,85,	0,4537,6013,7643,10589,12140,13033,14806,16275,18358,19533,28355,29579,
#Deleted in new
chr17	37614930	37615039	chr17:37614930-37615039	3	-	37614930	37614930	5263520	1	109,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	37619767	37643446	chr17:37619767-37643446	0	-	37635596	37643420	789624	12	72,648,91,204,73,112,144,186,131,54,199,113,	0,1105,4576,6127,7020,8793,10262,12345,13520,15783,22342,23566,
#Partially deleted in new
chr17	37624054	37626086	chr17:37624054-37626086	0	-	37624054	37624054	8553170	2	380,192,	0,1840,
#Partially deleted in new
chr17	37626825	37643433	chr17:37626825-37643433	0	-	37632278	37643420	789624	6	35,112,144,186,199,100,	0,1735,3204,5287,15284,16508,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	37630808	37642771	chr17:37630808-37642771	0	-	37630808	37630808	8553170	4	1490,131,199,52,	0,2479,11301,11911,
#Partially deleted in new
chr17	37642946	37684252	chr17:37642946-37684252	3	+	37642946	37642946	8553170	2	590,38,	0,41268,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	37643428	37676290	chr17:37643428-37676290	1	+	37643428	37643428	8553170	2	108,467,	0,32395,
#Partially deleted in new
chr17	37649132	37650894	chr17:37649132-37650894	3	+	37649132	37649132	8553170	2	267,340,	0,1422,
#Partially deleted in new
chr17	37686431	37745247	chr17:37686431-37745247	3	-	37687371	37744884	0	9	961,119,195,133,161,236,265,200,707,	0,12644,14551,18485,24071,45163,47125,53008,58109,
#Partially deleted in new
chr17	37687171	37745059	chr17:37687171-37745059	1	-	37687371	37744884	0	9	221,119,195,133,161,236,187,200,519,	0,11904,13811,17745,23331,44423,46385,52268,57369,
#Partially deleted in new
chr17	37687241	37745018	chr17:37687241-37745018	1	-	37687279	37744884	789624	7	151,133,161,236,187,200,478,	0,17675,23261,44353,46315,52198,57299,
#Partially deleted in new
chr17	37687241	37745018	chr17:37687241-37745018	1	-	37687279	37744884	789624	8	151,195,133,161,236,265,200,478,	0,13741,17675,23261,44353,46315,52198,57299,
#Partially deleted in new
chr17	37687241	37745018	chr17:37687241-37745018	1	-	37704978	37744884	789624	8	151,195,134,161,236,265,200,478,	0,13741,17675,23261,44353,46315,52198,57299,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	37728610	37733817	chr17:37728610-37733817	0	-	37728610	37728610	8553170	2	3220,261,	0,4946,
#Partially deleted in new
chr17	37731660	37745105	chr17:37731660-37745105	1	-	37731660	37744884	789624	6	169,32,29,108,200,565,	0,1896,1932,1975,7779,12880,
#Partially deleted in new
chr17	37798893	37802788	chr17:37798893-37802788	3	-	37798893	37798893	8553170	3	68,227,183,	0,3207,3712,
#Partially deleted in new
chr17	37828304	37855212	chr17:37828304-37855212	5	-	37828304	37828304	16724991	4	181,262,106,90,	0,398,26098,26818,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	37842948	37884743	chr17:37842948-37884743	7	-	37842948	37842948	16724991	7	1766,258,106,107,110,55,53,	0,2173,11454,12174,31255,41012,41742,
#Deleted in new
chr17	37854302	37855228	chr17:37854302-37855228	5	-	37854302	37854302	16724991	2	206,106,	0,820,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	37907956	37908063	chr17:37907956-37908063	3	+	37907956	37907956	8553170	1	107,	0,
#Deleted in new
chr17	37924414	37935365	chr17:37924414-37935365	3	+	37925999	37935056	789624	14	156,73,86,40,81,108,110,49,121,95,66,100,153,878,	0,1584,1819,3188,3710,4234,4671,6035,6627,7461,7940,8469,8939,10073,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	37940703	37940790	chr17:37940703-37940790	3	-	37940703	37940703	8553170	1	87,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	37977971	37987520	chr17:37977971-37987520	1	-	37978469	37987520	789624	13	1067,153,100,66,95,121,49,110,108,81,40,86,72,	0,2048,2571,3134,3584,4392,5056,6353,6792,7343,7906,9229,9477,
#Deleted in new
chr17	37978154	37989048	chr17:37978154-37989048	3	-	37978469	37987520	789624	14	884,153,100,66,95,121,49,110,108,81,40,86,73,99,	0,1865,2388,2951,3401,4209,4873,6170,6609,7160,7723,9046,9294,10795,
#Deleted in new
chr17	38003975	38014902	chr17:38003975-38014902	3	+	38005560	38014593	789624	14	156,73,86,40,81,108,110,49,121,95,66,100,153,878,	0,1584,1819,3188,3710,4234,4671,6029,6621,7455,7934,8463,8933,10049,
#Deleted in new
chr17	38057692	38068592	chr17:38057692-38068592	3	-	38058007	38067066	789624	14	884,153,100,66,95,121,49,110,108,81,40,86,73,97,	0,1865,2388,2951,3402,4210,4874,6178,6617,7168,7731,9054,9302,10803,
#Partially deleted in new
chr17	38078261	38124770	chr17:38078261-38124770	7	+	38078261	38078261	16724991	11	85,78,66,108,246,97,34,115,165,105,201,	0,23141,33139,36517,39278,39925,40146,41031,44538,45777,46308,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	38089398	38089500	chr17:38089398-38089500	3	+	38089398	38089398	8553170	1	102,	0,
#Deleted in new
chr17	38127950	38138862	chr17:38127950-38138862	3	+	38129495	38138553	789624	14	116,73,86,40,81,108,110,49,121,95,66,100,153,878,	0,1544,1779,3148,3670,4194,4631,5996,6588,7422,7901,8430,8900,10034,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	38144200	38144287	chr17:38144200-38144287	3	-	38144200	38144200	8553170	1	87,	0,
#Deleted in new
chr17	38181658	38192541	chr17:38181658-38192541	3	-	38181973	38191029	789624	14	884,153,100,66,95,121,49,110,108,81,40,86,73,97,	0,1865,2388,2951,3401,4209,4873,6175,6614,7165,7728,9051,9299,10786,
#Partially deleted in new
chr17	38195702	38257192	chr17:38195702-38257192	7	-	38195702	38195702	16724991	12	238,105,165,115,34,97,201,108,122,78,85,295,	0,664,1843,5402,6369,6535,7078,9932,13292,23343,46498,61195,
#Partially deleted in new
chr17	38195871	38257152	chr17:38195871-38257152	5	-	38195871	38195871	16724991	12	69,105,165,115,34,97,246,108,122,78,85,255,	0,495,1674,5233,6200,6366,6864,9763,13123,23174,46329,61026,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	38231042	38231144	chr17:38231042-38231144	3	-	38231042	38231042	8553170	1	102,	0,
#Partially deleted in new
chr17	38297022	38323218	chr17:38297022-38323218	3	+	38297183	38322595	789624	8	227,178,118,99,49,150,174,710,	0,1426,2328,9510,21664,23595,25103,25486,
#Partially deleted in new
chr17	38297022	38323217	chr17:38297022-38323217	1	+	38297183	38322595	789624	7	227,178,118,99,49,174,709,	0,1426,2328,9510,21664,25103,25486,
#Deleted in new
chr17	38325529	38328503	chr17:38325529-38328503	0	-	38325529	38325529	8553170	2	164,134,	0,2840,
#Partially deleted in new
chr17	38325609	38343810	chr17:38325609-38343810	3	-	38326464	38343789	789624	11	5922,147,106,139,239,110,69,236,88,109,815,	0,7641,8323,9094,9423,9981,10466,11368,12023,13807,17386,
#Partially deleted in new
chr17	38325609	38343810	chr17:38325609-38343810	1	-	38326464	38343789	789624	11	5922,147,106,139,239,110,69,236,88,112,815,	0,7641,8323,9094,9423,9981,10466,11368,12023,13807,17386,
#Partially deleted in new
chr17	38339334	38343847	chr17:38339334-38343847	0	-	38339334	38339334	8553170	2	191,852,	0,3661,
#Partially deleted in new
chr17	38352227	38399648	chr17:38352227-38399648	1	+	38352244	38395968	789624	9	805,65,105,131,169,129,136,151,136,	0,9483,12524,14059,15654,25486,43081,43620,47285,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	38352244	38405593	chr17:38352244-38405593	3	+	38352244	38395968	789624	10	788,65,105,102,131,169,129,136,151,6081,	0,9466,12507,13063,14042,15637,25469,43064,43603,47268,
#Partially deleted in new
chr17	38352942	38377738	chr17:38352942-38377738	0	+	38352942	38377738	789624	5	90,65,131,169,25,	0,8768,13344,14939,24771,
#Partially deleted in new
chr17	38419279	38463182	chr17:38419279-38463182	0	+	38419279	38419279	8553170	5	120,162,28,96,65,	0,38822,41625,43566,43838,
#Partially deleted in new
chr17	38428417	38512392	chr17:38428417-38512392	3	+	38428485	38510972	789624	24	131,162,28,96,79,55,1165,156,112,58,144,318,62,131,122,156,79,74,90,126,42,97,32,2449,	0,29684,32487,34428,34700,34910,37749,40726,41106,41429,43445,49161,51018,51335,53604,54105,57644,61684,62044,62989,69367,69996,72179,81526,
#Partially deleted in new
chr17	38428485	38510136	chr17:38428485-38510136	1	+	38428485	38498951	789624	25	63,162,28,96,79,55,1165,156,112,58,144,318,62,131,122,156,79,74,90,126,42,97,23,32,193,	0,29616,32419,34360,34632,34842,37681,40658,41038,41361,43377,49093,50950,51267,53536,54037,57576,61616,61976,62921,69299,69928,70446,72111,81458,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	38450393	38452399	chr17:38450393-38452399	3	-	38450393	38450393	8553170	4	330,88,202,82,	0,912,1232,1924,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	38450587	38452444	chr17:38450587-38452444	1	-	38450587	38450587	8553170	4	136,88,131,127,	0,718,1038,1730,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	38450625	38451946	chr17:38450625-38451946	1	-	38450625	38450625	8553170	2	98,321,	0,1000,
#Deleted in new
chr17	38451055	38451688	chr17:38451055-38451688	1	-	38451055	38451055	8553170	2	338,63,	0,570,
#Deleted in new
chr17	38451160	38451903	chr17:38451160-38451903	0	-	38451160	38451160	8553170	2	365,278,	0,465,
#Deleted in new
chr17	38451305	38452363	chr17:38451305-38452363	0	-	38451305	38451305	8553170	3	220,202,46,	0,320,1012,
#Partially deleted in new
chr17	38453689	38458196	chr17:38453689-38458196	0	+	38453689	38453689	8553170	2	451,95,	0,4412,
#Partially deleted in new
chr17	38457399	38466272	chr17:38457399-38466272	0	+	38462874	38466272	789624	7	443,162,28,96,79,55,106,	0,702,3505,5446,5718,5928,8767,
#Partially deleted in new
chr17	38469579	38482143	chr17:38469579-38482143	0	+	38469579	38477832	789624	8	56,58,144,127,69,62,131,122,	0,267,2283,7999,8248,9856,10173,12442,
#Partially deleted in new
chr17	38471938	38482558	chr17:38471938-38482558	0	+	38471938	38482558	789624	6	68,69,62,131,122,36,	0,5889,7497,7814,10083,10584,
#Partially deleted in new
chr17	38482522	38490144	chr17:38482522-38490144	0	+	38482522	38489774	789624	4	156,79,160,43,	0,3539,7235,7579,
#Partially deleted in new
chr17	38490461	38510060	chr17:38490461-38510060	0	+	38490461	38510060	789624	5	90,126,42,32,117,	0,945,7323,10135,19482,
#Partially deleted in new
chr17	38490484	38491744	chr17:38490484-38491744	0	+	38490484	38490484	8553170	2	67,338,	0,922,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	38497792	38501124	chr17:38497792-38501124	0	+	38497792	38500658	789624	3	34,97,528,	0,621,2804,
#Partially deleted in new
chr17	38500332	38510118	chr17:38500332-38510118	0	+	38500332	38500332	8553170	2	296,175,	0,9611,
#Partially deleted in new
chr17	38530015	38605930	chr17:38530015-38605930	3	-	38533296	38605705	789624	19	3416,147,153,155,235,247,148,131,176,188,44,93,866,94,199,196,21,302,247,	0,13807,18541,19040,21139,21870,22431,22709,28211,29569,30038,30317,31447,32811,33307,34102,38195,48474,75668,
#Partially deleted in new
chr17	38532443	38605842	chr17:38532443-38605842	1	-	38533296	38605705	789624	20	988,147,153,155,235,247,148,131,176,188,44,93,866,94,199,196,24,99,302,159,	0,11379,16113,16612,18711,19442,20003,20281,25783,27141,27610,27889,29019,30383,30879,31674,35767,42432,46046,73240,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	38541280	38563424	chr17:38541280-38563424	0	-	38543130	38563424	789624	15	1856,147,153,155,235,247,148,131,176,188,44,93,866,94,102,	0,2542,7276,7775,9874,10605,11166,11444,16946,18304,18773,19052,20182,21546,22042,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr17	38541283	38572820	chr17:38541283-38572820	0	-	38541283	38541283	8553170	19	1853,147,123,153,155,235,247,148,131,176,188,44,93,866,94,199,196,24,153,	0,2539,6475,7273,7772,9871,10602,11163,11441,16943,18301,18770,19049,20179,21543,22039,22834,26927,31384,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	38541283	38563996	chr17:38541283-38563996	0	-	38541283	38541283	8553170	15	1853,147,153,155,235,247,148,131,176,188,44,93,866,94,674,	0,2539,7273,7772,9871,10602,11163,11441,16943,18301,18770,19049,20179,21543,22039,
#Partially deleted in new
chr17	38544577	38548701	chr17:38544577-38548701	0	-	38544808	38548701	789624	3	882,123,145,	0,3181,3979,
#Partially deleted in new
chr17	38545267	38546721	chr17:38545267-38546721	0	-	38545267	38545267	8553170	2	192,261,	0,1193,
#Partially deleted in new
chr17	38551678	38559473	chr17:38551678-38559473	0	-	38551678	38551678	8553170	5	454,148,131,176,407,	0,768,1046,6548,7388,
#Partially deleted in new
chr17	38561921	38604612	chr17:38561921-38604612	0	-	38561921	38604602	789624	7	407,94,199,196,99,302,134,	0,905,1401,2196,12954,16568,42557,
#Deleted in new
chr17	38601048	38602701	chr17:38601048-38602701	3	+	38601048	38601048	8553170	2	99,472,	0,1181,
#Deleted in new
chr17	38671702	38675421	chr17:38671702-38675421	3	-	38673355	38674495	789624	1	3719,	0,
#Deleted in new
chr17	38702261	38702331	chr17:38702261-38702331	3	-	38702261	38702261	5263520	1	70,	0,
#Deleted in new
chr17	38702451	38704747	chr17:38702451-38704747	3	+	38702451	38702451	8553170	1	2296,	0,
#Deleted in new
chr17	38703479	38706261	chr17:38703479-38706261	3	-	38703479	38703479	8553170	2	278,208,	0,2574,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	38705541	38714756	chr17:38705541-38714756	1	+	38705632	38713111	789624	9	200,80,55,110,104,94,168,99,1804,	0,1408,1944,2221,3631,3940,6305,7149,7411,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr17	38705541	38729803	chr17:38705541-38729803	3	+	38705632	38725598	789624	20	200,80,55,110,104,94,168,99,217,615,182,109,67,146,198,89,350,91,357,4247,	0,1408,1944,2221,3631,3940,6305,7149,10070,10825,11890,12303,13975,14208,14830,15117,16336,17136,19078,20015,
#Partially deleted in new
chr17	38705619	38716335	chr17:38705619-38716335	0	+	38705619	38705619	8553170	9	122,80,55,110,104,94,168,99,724,	0,1330,1866,2143,3553,3862,6227,7071,9992,
#Deleted in new
chr17	38706638	38707799	chr17:38706638-38707799	0	+	38706638	38706638	8553170	3	391,55,37,	0,847,1124,
#Deleted in new
chr17	38706950	38708285	chr17:38706950-38708285	0	+	38706950	38706950	8553170	3	79,55,523,	0,535,812,
#Partially deleted in new
chr17	38709079	38715677	chr17:38709079-38715677	0	+	38709079	38709079	8553170	5	197,94,168,99,66,	0,402,2767,3611,6532,
#Partially deleted in new
chr17	38715327	38720272	chr17:38715327-38720272	3	-	38715327	38715327	8553170	5	31,136,210,153,33,	0,250,1179,3787,4912,
#Partially deleted in new
chr17	38717423	38721156	chr17:38717423-38721156	0	+	38717423	38720855	789624	6	190,109,67,146,198,498,	0,421,2093,2326,2948,3235,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	38717509	38718267	chr17:38717509-38718267	0	+	38717509	38717509	8553170	2	104,423,	0,335,
#Partially deleted in new
chr17	38718582	38727192	chr17:38718582-38727192	0	+	38718582	38718582	8553170	8	1001,146,198,89,350,91,357,1636,	0,1167,1789,2076,3295,4095,6037,6974,
#Deleted in new
chr17	38719690	38719748	chr17:38719690-38719748	3	+	38719690	38719690	5263520	1	58,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	38724255	38727192	chr17:38724255-38727192	0	+	38724255	38724255	8553170	1	2937,	0,
#Deleted in new
chr17	38725756	38727171	chr17:38725756-38727171	0	+	38725756	38725756	8553170	2	104,291,	0,1124,
#Deleted in new
chr17	38727832	38728198	chr17:38727832-38728198	3	-	38727832	38727832	8553170	1	366,	0,
#Partially deleted in new
chr17	38730234	38735021	chr17:38730234-38735021	3	+	38730358	38733455	0	4	172,36,120,1746,	0,525,1085,3041,
#Partially deleted in new
chr17	38730358	38735044	chr17:38730358-38735044	0	+	38730358	38730358	8553170	3	437,120,1769,	0,961,2917,
#Partially deleted in new
chr17	38731106	38733715	chr17:38731106-38733715	0	+	38731106	38731106	8553170	2	333,440,	0,2169,
#Partially deleted in new
chr17	38733896	38748305	chr17:38733896-38748305	1	-	38735222	38740402	789624	11	1704,81,96,55,109,51,56,97,152,93,110,	0,2193,4456,4644,4856,5171,5301,5689,6394,13982,14299,
#Partially deleted in new
chr17	38733897	38749817	chr17:38733897-38749817	3	-	38735222	38740402	789624	12	1703,81,96,55,109,51,56,97,152,93,113,456,	0,2192,4455,4643,4855,5170,5300,5688,6393,13981,14298,15464,
#Deleted in new
chr17	38733899	38735596	chr17:38733899-38735596	0	-	38734158	38735596	789624	2	354,105,	0,1592,
#Partially deleted in new
chr17	38734279	38746628	chr17:38734279-38746628	1	-	38735222	38740402	789624	10	1321,81,96,55,109,51,56,97,152,161,	0,1810,4073,4261,4473,4788,4918,5306,6011,12188,
#Partially deleted in new
chr17	38735043	38748378	chr17:38735043-38748378	1	-	38735487	38740402	789624	11	557,81,96,55,113,51,56,97,152,93,183,	0,1046,3309,3497,3705,4024,4154,4542,5247,12835,13152,
#Partially deleted in new
chr17	38735108	38748184	chr17:38735108-38748184	1	-	38735487	38740402	789624	10	492,81,96,55,113,51,56,97,152,306,	0,981,3244,3432,3640,3959,4089,4477,5182,12770,
#Partially deleted in new
chr17	38735111	38748353	chr17:38735111-38748353	1	-	38735487	38739632	789624	9	489,81,96,55,113,51,56,97,158,	0,978,3241,3429,3637,3956,4086,4474,13084,
#Deleted in new
chr17	38749359	38751457	chr17:38749359-38751457	3	+	38749359	38749359	8553170	1	2098,	0,
#Partially deleted in new
chr17	38752735	38764231	chr17:38752735-38764231	3	+	38752826	38764167	0	6	94,185,108,178,95,113,	0,414,3147,7695,9675,11383,
#Partially deleted in new
chr17	38752746	38760580	chr17:38752746-38760580	0	+	38753155	38760580	789624	4	67,185,108,150,	0,403,3136,7684,
#Partially deleted in new
chr17	38752763	38764225	chr17:38752763-38764225	0	+	38752826	38760535	789624	6	66,185,108,101,95,107,	0,386,3119,7744,9647,11355,
#Partially deleted in new
chr17	38752772	38764225	chr17:38752772-38764225	0	+	38752826	38762453	789624	5	57,185,108,95,107,	0,377,3110,9638,11346,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	38755278	38755400	chr17:38755278-38755400	3	-	38755278	38755278	8553170	1	122,	0,
#Partially deleted in new
chr17	38760384	38764225	chr17:38760384-38764225	0	+	38760384	38760384	8553170	3	224,95,107,	0,2026,3734,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	38762050	38764225	chr17:38762050-38764225	0	+	38762050	38762050	8553170	2	455,107,	0,2068,
#Partially deleted in new
chr17	38765688	38799905	chr17:38765688-38799905	3	-	38769690	38799424	0	10	4083,104,259,114,39,147,153,97,98,640,	0,4747,5325,11998,12645,13694,14763,18554,21134,33577,
#Partially deleted in new
chr17	38771173	38779930	chr17:38771173-38779930	0	-	38771173	38771173	8553170	5	99,114,39,147,79,	0,6513,7160,8209,8678,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	38776603	38799522	chr17:38776603-38799522	0	-	38776603	38776603	8553170	8	22,114,39,147,153,97,98,257,	0,1083,1730,2779,3848,7639,10219,22662,
#Partially deleted in new
chr17	38780552	38800126	chr17:38780552-38800126	0	-	38780552	38786887	789624	5	52,97,98,157,143,	0,3690,6270,12173,19431,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	38800433	38825481	chr17:38800433-38825481	3	-	38802091	38825183	789624	10	1773,162,99,212,64,128,70,237,173,316,	0,2266,5863,6331,9268,10034,12361,14427,20467,24732,
#Partially deleted in new
chr17	38801724	38825315	chr17:38801724-38825315	0	-	38815725	38825183	789624	11	482,162,99,212,64,128,70,237,117,173,150,	0,975,4572,5040,7977,8743,11070,13136,13900,19176,23441,
#Partially deleted in new
chr17	38802814	38815735	chr17:38802814-38815735	0	-	38815725	38815735	8553170	8	47,99,212,64,320,70,237,111,	0,3482,3950,6887,7461,9980,12046,12810,
#Partially deleted in new
chr17	38802839	38810595	chr17:38802839-38810595	0	-	38810348	38810595	789624	6	22,99,212,64,125,128,	0,3457,3925,6862,7436,7628,
#Partially deleted in new
chr17	38806502	38809808	chr17:38806502-38809808	0	-	38806502	38806502	8553170	2	474,107,	0,3199,
#Partially deleted in new
chr17	38806799	38825355	chr17:38806799-38825355	0	-	38806799	38806799	8553170	7	177,64,320,70,237,173,86,	0,2902,3476,5995,8061,14101,18470,
#Partially deleted in new
chr17	38810353	38825306	chr17:38810353-38825306	0	-	38815725	38825183	789624	6	242,66,237,117,173,141,	0,2441,4507,5271,10547,14812,
#Deleted in new
chr17	38825837	38825892	chr17:38825837-38825892	3	+	38825837	38825837	5263520	1	55,	0,
#Partially deleted in new
chr17	38835087	38841455	chr17:38835087-38841455	3	-	38835188	38841389	789624	3	259,100,273,	0,2053,6095,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	38847864	38853722	chr17:38847864-38853722	1	-	38850131	38853710	0	6	175,98,114,129,84,25,	0,2252,2497,4739,5157,5833,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	38847864	38853735	chr17:38847864-38853735	1	-	38847938	38853710	789624	4	193,129,84,38,	0,4739,5157,5833,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	38847866	38853843	chr17:38847866-38853843	3	-	38850131	38853710	0	5	2348,114,129,84,146,	0,2495,4737,5155,5831,
#Partially deleted in new
chr17	38850080	38853428	chr17:38850080-38853428	1	-	38850131	38852652	789624	5	134,114,129,84,127,	0,281,2523,2941,3221,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	38850080	38853740	chr17:38850080-38853740	0	-	38850080	38850080	8553170	3	2652,84,43,	0,2941,3617,
#Partially deleted in new
chr17	38850085	38850661	chr17:38850085-38850661	0	-	38850085	38850085	8553170	2	129,300,	0,276,
#Partially deleted in new
chr17	38850113	38853737	chr17:38850113-38853737	1	-	38850332	38853710	789624	4	362,129,84,40,	0,2490,2908,3584,
#Partially deleted in new
chr17	38850421	38853424	chr17:38850421-38853424	0	-	38850421	38852652	789624	4	54,129,84,66,	0,2182,2600,2937,
#Partially deleted in new
chr17	38850438	38853629	chr17:38850438-38853629	0	-	38850438	38853512	789624	4	37,129,84,142,	0,2165,2583,3049,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	38850683	38853764	chr17:38850683-38853764	0	-	38850683	38850683	8553170	1	3081,	0,
#Partially deleted in new
chr17	38851523	38851659	chr17:38851523-38851659	3	-	38851523	38851523	5263520	1	136,	0,
#Deleted in new
chr17	38852597	38853738	chr17:38852597-38853738	0	-	38852597	38852597	8553170	2	508,41,	0,1100,
#Deleted in new
chr17	38852862	38852994	chr17:38852862-38852994	3	-	38852862	38852862	789624	1	132,	0,
#Deleted in new
chr17	38855313	38855670	chr17:38855313-38855670	7	+	38855313	38855313	16724991	1	357,	0,
#Partially deleted in new
chr17	38869858	38921770	chr17:38869858-38921770	3	+	38870189	38918778	0	7	400,95,85,108,151,104,3166,	0,8227,20561,28553,44466,45184,48746,
#Partially deleted in new
chr17	38869858	38921769	chr17:38869858-38921769	1	+	38878099	38918778	0	6	400,95,108,151,104,3165,	0,8227,28553,44466,45184,48746,
#Partially deleted in new
chr17	38870030	38919326	chr17:38870030-38919326	0	+	38870189	38898463	789624	6	228,95,108,151,104,722,	0,8055,28381,44294,45012,48574,
#Partially deleted in new
chr17	38870060	38919175	chr17:38870060-38919175	0	+	38870189	38896928	789624	8	198,95,85,170,108,151,104,571,	0,8025,20359,26841,28351,44264,44982,48544,
#Partially deleted in new
chr17	38870060	38899200	chr17:38870060-38899200	0	+	38870060	38870060	8553170	4	198,95,85,789,	0,8025,20359,28351,
#Partially deleted in new
chr17	38870142	38921761	chr17:38870142-38921761	1	+	38870189	38918778	0	8	116,95,85,108,151,104,1378,1455,	0,7943,20277,28269,44182,44900,48462,50164,
#Partially deleted in new
chr17	38873889	38915141	chr17:38873889-38915141	0	+	38878124	38915141	789624	6	224,95,85,108,151,99,	0,4196,16530,24522,40435,41153,
#Partially deleted in new
chr17	38890233	38915129	chr17:38890233-38915129	0	+	38890233	38890233	8553170	4	271,108,151,87,	0,8178,24091,24809,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	38914396	38916837	chr17:38914396-38916837	0	+	38914396	38915281	789624	2	79,1795,	0,646,
#Deleted in new
chr17	38914978	38915042	chr17:38914978-38915042	3	+	38914978	38914978	5263520	1	64,	0,
#Deleted in new
chr17	38918800	38921769	chr17:38918800-38921769	3	-	38918800	38918800	8553170	2	221,235,	0,2734,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	38925167	38929384	chr17:38925167-38929384	3	+	38925693	38925771	789624	2	724,2968,	0,1249,
#Partially deleted in new
chr17	38936431	38967402	chr17:38936431-38967402	3	-	38937174	38963025	789624	11	859,160,143,147,177,109,78,77,171,207,174,	0,2141,6346,7158,8528,15149,18424,20745,25445,26413,30797,
#Deleted in new
chr17	38996322	38996624	chr17:38996322-38996624	7	-	38996322	38996322	16724991	1	302,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	39003247	39013032	chr17:39003247-39013032	3	-	39003247	39003247	8553170	3	472,64,100,	0,6391,9685,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	39009291	39013031	chr17:39009291-39013031	1	-	39009291	39009291	8553170	2	411,99,	0,3641,
#Partially deleted in new
chr17	39023393	39026742	chr17:39023393-39026742	7	+	39023393	39023393	16724991	2	123,86,	0,3263,
#Deleted in new
chr17	39026714	39027110	chr17:39026714-39027110	3	-	39026714	39026714	789624	2	231,63,	0,333,
#Partially deleted in new
chr17	39027276	39045347	chr17:39027276-39045347	5	+	39027276	39027276	16724991	12	465,806,809,453,633,72,73,72,81,60,52,141,	0,973,2173,3875,4529,6893,12191,15199,15922,17330,17804,17930,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	39029905	39053205	chr17:39029905-39053205	7	+	39029905	39029905	16724991	5	2532,72,81,554,341,	0,4264,13293,14482,22959,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	39033108	39053199	chr17:39033108-39053199	4	+	39033108	39033108	16724991	4	337,72,1954,335,	0,1061,11279,19756,
#Deleted in new
chr17	39033925	39034042	chr17:39033925-39034042	7	-	39033925	39033925	16724991	1	117,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	39057018	39081451	chr17:39057018-39081451	5	+	39057018	39057018	16724991	5	141,125,125,266,1648,	0,6403,15448,16049,22785,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	39057051	39112239	chr17:39057051-39112239	4	+	39057051	39057051	16724991	5	108,92,125,933,468,	0,4045,6370,50365,54720,
#Partially deleted in new
chr17	39057063	39058036	chr17:39057063-39058036	7	+	39057063	39057063	16724991	2	105,174,	0,799,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	39063302	39151649	chr17:39063302-39151649	3	-	39067839	39151437	789624	14	4657,161,36,136,61,82,96,100,119,123,70,144,179,288,	0,6553,9147,14610,15801,20156,24304,42551,44104,44820,45601,45945,76351,88059,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	39067129	39151519	chr17:39067129-39151519	0	-	39067129	39067129	8553170	14	830,161,36,136,425,82,96,100,119,123,70,144,179,158,	0,2726,5320,10783,11974,16329,20477,38724,40277,40993,41774,42118,72524,84232,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	39067129	39151519	chr17:39067129-39151519	0	-	39081424	39151437	789624	15	830,161,36,136,425,200,82,96,100,119,123,70,144,179,158,	0,2726,5320,10783,11974,14120,16329,20477,38724,40277,40993,41774,42118,72524,84232,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	39067129	39153027	chr17:39067129-39153027	0	-	39067129	39067129	8553170	14	830,161,36,136,425,82,96,100,119,123,70,144,179,104,	0,2726,5320,10783,11974,16329,20477,38724,40277,40993,41774,42118,72524,85794,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	39067131	39153232	chr17:39067131-39153232	0	-	39067131	39067131	8553170	13	828,161,36,136,425,96,100,119,123,70,144,179,309,	0,2724,5318,10781,11972,20475,38722,40275,40991,41772,42116,72522,85792,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	39067131	39132037	chr17:39067131-39132037	0	-	39067131	39067131	8553170	13	828,161,36,136,425,82,96,100,119,123,70,144,282,	0,2724,5318,10781,11972,16327,20475,38722,40275,40991,41772,42116,64624,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	39067159	39152699	chr17:39067159-39152699	1	-	39067839	39152680	789624	13	800,161,36,136,61,82,96,100,119,123,70,144,154,	0,2696,5290,10753,11944,16299,20447,38694,40247,40963,41744,42088,85386,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	39067921	39070471	chr17:39067921-39070471	0	-	39067921	39067921	8553170	2	38,616,	0,1934,
#Partially deleted in new
chr17	39069980	39079270	chr17:39069980-39079270	0	-	39069980	39069980	8553170	3	36,136,167,	0,7932,9123,
#Partially deleted in new
chr17	39072013	39078008	chr17:39072013-39078008	0	-	39072013	39072013	8553170	2	472,96,	0,5899,
#Partially deleted in new
chr17	39077948	39107487	chr17:39077948-39107487	0	-	39077948	39107487	789624	7	100,61,27,82,96,100,81,	0,1155,1553,5510,9658,27905,29458,
#Partially deleted in new
chr17	39087607	39153032	chr17:39087607-39153032	0	-	39108953	39139689	789624	9	95,100,119,123,70,144,100,179,109,	0,18246,19799,20515,21296,21640,39297,52046,65316,
#Partially deleted in new
chr17	39087628	39152612	chr17:39087628-39152612	0	-	39087628	39139689	789624	8	74,100,119,123,70,144,179,67,	0,18225,19778,20494,21275,21619,52025,64917,
#Partially deleted in new
chr17	39096867	39107468	chr17:39096867-39107468	0	-	39096867	39096867	8553170	3	106,100,62,	0,8986,10539,
#Partially deleted in new
chr17	39107406	39112177	chr17:39107406-39112177	0	-	39107406	39107406	8553170	5	119,123,70,144,88,	0,716,1497,1841,4683,
#Partially deleted in new
chr17	39108122	39152571	chr17:39108122-39152571	0	-	39108122	39139689	789624	5	123,70,144,179,103,	0,781,1125,31531,44346,
#Partially deleted in new
chr17	39108201	39154394	chr17:39108201-39154394	0	-	39108201	39139689	789624	5	44,70,144,179,128,	0,702,1046,31452,46065,
#Partially deleted in new
chr17	39108714	39153050	chr17:39108714-39153050	0	-	39108714	39108714	8553170	5	45,70,144,179,127,	0,189,533,30939,44209,
#Partially deleted in new
chr17	39126938	39153050	chr17:39126938-39153050	0	-	39126938	39126938	8553170	4	66,179,156,127,	0,12715,17758,25985,
#Partially deleted in new
chr17	39156893	39165760	chr17:39156893-39165760	3	-	39156893	39165760	789624	6	49,152,84,148,61,46,	0,3697,4374,5817,8185,8821,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	39164078	39167065	chr17:39164078-39167065	0	-	39164078	39164078	8553170	5	211,61,153,108,125,	0,1000,1636,2431,2862,
#Partially deleted in new
chr17	39164974	39166161	chr17:39164974-39166161	0	-	39164974	39164974	8553170	2	165,447,	0,740,
#Partially deleted in new
chr17	39165072	39167484	chr17:39165072-39167484	0	-	39165072	39165072	8553170	1	2412,	0,
#Partially deleted in new
chr17	39165072	39167849	chr17:39165072-39167849	3	+	39165072	39165072	8553170	1	2777,	0,
#Deleted in new
chr17	39173289	39177503	chr17:39173289-39177503	3	+	39173289	39173289	8553170	2	273,300,	0,3914,
#Partially deleted in new
chr17	39173455	39197703	chr17:39173455-39197703	3	-	39175192	39197495	789624	14	2202,186,96,152,110,59,81,20,77,137,123,120,87,292,	0,3894,4528,10257,10575,10869,11328,11675,13040,13337,14023,18018,21428,23956,
#Partially deleted in new
chr17	39173455	39197703	chr17:39173455-39197703	1	-	39184841	39197495	789624	13	2202,186,96,152,110,59,81,77,137,123,120,87,292,	0,3894,4528,10257,10575,10869,11328,13040,13337,14023,18018,21428,23956,
#Partially deleted in new
chr17	39173800	39193883	chr17:39173800-39193883	0	-	39173800	39173800	8553170	12	1857,186,96,152,110,59,81,20,77,137,123,2410,	0,3549,4183,9912,10230,10524,10983,11330,12695,12992,13678,17673,
#Partially deleted in new
chr17	39177135	39197703	chr17:39177135-39197703	1	-	39177244	39197495	789624	13	400,96,152,110,59,81,155,77,137,123,120,87,292,	0,848,6577,6895,7189,7648,8814,9360,9657,10343,14338,17748,20276,
#Partially deleted in new
chr17	39177135	39197702	chr17:39177135-39197702	1	-	39177244	39197495	789624	13	400,96,152,110,59,81,20,77,137,123,120,87,291,	0,848,6577,6895,7189,7648,7995,9360,9657,10343,14338,17748,20276,
#Deleted in new
chr17	39177416	39178270	chr17:39177416-39178270	0	-	39177416	39177416	8553170	2	119,287,	0,567,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	39184324	39187439	chr17:39184324-39187439	0	-	39184324	39184324	8553170	5	59,81,77,137,209,	0,459,2171,2468,2906,
#Partially deleted in new
chr17	39186422	39193493	chr17:39186422-39193493	0	-	39186422	39186422	8553170	5	150,137,123,120,45,	0,370,1056,5051,7026,
#Partially deleted in new
chr17	39186541	39193824	chr17:39186541-39193824	0	-	39186541	39186541	8553170	5	31,137,123,120,177,	0,251,937,4932,7106,
#Partially deleted in new
chr17	39186541	39195071	chr17:39186541-39195071	0	-	39186541	39186541	8553170	5	31,137,123,120,188,	0,251,937,4932,8342,
#Deleted in new
chr17	39191614	39193493	chr17:39191614-39193493	0	-	39191614	39191614	8553170	2	480,45,	0,1834,
#Deleted in new
chr17	39192023	39195269	chr17:39192023-39195269	0	-	39192023	39192023	8553170	4	71,150,87,119,	0,1624,2860,3127,
#Partially deleted in new
chr17	39200282	39204732	chr17:39200282-39204732	3	+	39200344	39204648	0	6	67,107,123,121,111,208,	0,930,2034,2706,3794,4242,
#Partially deleted in new
chr17	39200315	39204727	chr17:39200315-39204727	1	+	39200344	39204648	789624	6	34,98,123,121,111,203,	0,906,2001,2673,3761,4209,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	39200316	39204727	chr17:39200316-39204727	0	+	39200316	39200316	8553170	5	33,107,793,111,203,	0,896,2000,3760,4208,
#Partially deleted in new
chr17	39200341	39204711	chr17:39200341-39204711	1	+	39201213	39204648	789624	6	402,107,123,121,111,187,	0,871,1975,2647,3735,4183,
#Partially deleted in new
chr17	39200344	39204720	chr17:39200344-39204720	1	+	39201213	39204648	789624	6	134,107,123,121,111,196,	0,868,1972,2644,3732,4180,
#Partially deleted in new
chr17	39201131	39203079	chr17:39201131-39203079	0	+	39201131	39201131	8553170	3	188,123,91,	0,1185,1857,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	39210535	39225872	chr17:39210535-39225872	3	-	39212291	39225502	0	11	1861,138,52,98,71,73,113,91,98,307,460,	0,2459,2971,3697,4255,4415,4582,6274,6540,7331,14877,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	39211240	39225668	chr17:39211240-39225668	0	-	39215167	39225502	789624	11	1156,138,52,98,71,73,113,91,98,105,256,	0,1754,2266,2992,3550,3710,3877,5569,5835,6828,14172,
#Partially deleted in new
chr17	39238465	39245667	chr17:39238465-39245667	7	+	39238465	39238465	16724991	11	93,69,115,105,27,144,102,98,54,76,92,	0,221,1324,1544,1744,4735,5443,5991,6406,6642,7110,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	39243962	39250818	chr17:39243962-39250818	5	+	39243962	39243962	16724991	6	48,98,55,94,156,182,	0,494,820,1127,1613,6674,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	39252643	39401663	chr17:39252643-39401663	3	-	39261459	39401402	789624	15	8924,213,57,45,61,131,75,127,96,69,95,75,55,62,303,	0,11531,12753,16183,18152,22326,28745,30085,32834,44483,46346,48357,50941,90536,148717,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr17	39259130	39401656	chr17:39259130-39401656	1	-	39261459	39401402	789624	16	166,116,213,57,45,61,131,75,127,96,69,95,75,55,62,296,	0,2321,5044,6266,9696,11665,15839,22258,23598,26347,37996,39859,41870,44454,84049,142230,
#Partially deleted in new
chr17	39260586	39401623	chr17:39260586-39401623	1	-	39261459	39401402	789624	14	981,213,57,45,61,131,75,127,69,95,75,55,62,263,	0,3588,4810,8240,10209,14383,20802,22142,36540,38403,40414,42998,82593,140774,
#Partially deleted in new
chr17	39261459	39402523	chr17:39261459-39402523	1	-	39261459	39402220	789624	15	108,213,57,45,61,131,75,127,96,69,95,75,55,62,351,	0,2715,3937,7367,9336,13510,19929,21269,24018,35667,37530,39541,42125,81720,140713,
#Partially deleted in new
chr17	39263875	39270810	chr17:39263875-39270810	0	-	39264156	39270810	789624	4	512,57,45,15,	0,1521,4951,6920,
#Partially deleted in new
chr17	39343179	39401706	chr17:39343179-39401706	0	-	39343179	39343241	789624	2	62,41,	0,58486,
#Partially deleted in new
chr17	39401792	39406233	chr17:39401792-39406233	3	+	39401792	39401792	8553170	2	106,754,	0,3687,
#Partially deleted in new
chr17	39404284	39451268	chr17:39404284-39451268	1	-	39405277	39451062	0	18	1024,141,106,96,202,119,125,112,90,74,75,72,29,133,55,79,107,231,	0,6296,10741,10959,15432,19042,19412,20342,23416,26830,27657,29964,34880,36101,36338,39265,43513,46753,
#Partially deleted in new
chr17	39406600	39451286	chr17:39406600-39451286	3	-	39407474	39451062	0	17	4121,106,96,202,119,125,112,90,74,75,72,29,133,55,79,107,249,	0,8425,8643,13116,16726,17096,18026,21100,24514,25341,27648,32564,33785,34022,36949,41197,44437,
#Partially deleted in new
chr17	39407713	39451272	chr17:39407713-39451272	0	-	39439165	39451062	789624	16	3008,106,96,202,119,125,112,90,74,75,72,29,55,79,107,235,	0,7312,7530,12003,15613,15983,16913,19987,23401,24228,26535,31451,32909,35836,40084,43324,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	39427445	39431236	chr17:39427445-39431236	0	-	39427445	39427445	8553170	2	345,122,	0,3669,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	39443549	39451272	chr17:39443549-39451272	0	-	39445461	39451062	789624	4	79,159,107,235,	0,1861,4248,7488,
#Partially deleted in new
chr17	39461510	39526163	chr17:39461510-39526163	0	+	39462071	39526163	789624	13	1607,882,177,140,171,190,57,102,78,117,132,212,300,	0,9371,29046,31240,33013,39739,48194,50018,54220,55929,58445,63163,64353,
#Partially deleted in new
chr17	39461760	39532477	chr17:39461760-39532477	1	+	39462071	39531316	0	14	1357,885,177,140,171,190,57,102,78,117,132,212,453,1847,	0,9118,28796,30990,32763,39489,47944,49768,53970,55679,58195,62913,64103,68870,
#Partially deleted in new
chr17	39462038	39535146	chr17:39462038-39535146	3	+	39462071	39531316	0	14	1079,885,177,140,171,190,57,102,78,117,132,212,453,4543,	0,8840,28518,30712,32485,39211,47666,49490,53692,55401,57917,62635,63825,68565,
#Partially deleted in new
chr17	39471513	39494692	chr17:39471513-39494692	0	+	39471513	39471513	8553170	3	250,140,169,	0,21237,23010,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	39525866	39551141	chr17:39525866-39551141	0	+	39525866	39544277	789624	5	450,112,142,63,104,	0,18382,20750,21901,25171,
#Deleted in new
chr17	39529881	39531844	chr17:39529881-39531844	0	+	39529881	39529881	8553170	1	1963,	0,
#Partially deleted in new
chr17	39543990	39546682	chr17:39543990-39546682	0	+	39543990	39543990	8553170	2	370,66,	0,2626,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	39546103	39546244	chr17:39546103-39546244	3	-	39546103	39546103	8553170	1	141,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	39547820	39564907	chr17:39547820-39564907	0	+	39547820	39547820	8553170	5	10,105,128,195,148,	0,3217,8465,9043,16939,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	39548940	39550976	chr17:39548940-39550976	0	+	39548940	39548940	8553170	1	2036,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	39550190	39564830	chr17:39550190-39564830	0	+	39550190	39550190	8553170	4	251,105,128,71,	0,847,6095,14569,
#Deleted in new
chr17	39566914	39567559	chr17:39566914-39567559	3	+	39566914	39566914	8553170	1	645,	0,
#Deleted in new
chr17	39603535	39609777	chr17:39603535-39609777	0	-	39603535	39603535	8553170	1	6242,	0,
#Deleted in new
chr17	39604779	39607943	chr17:39604779-39607943	3	-	39605450	39606599	789624	2	1825,216,	0,2948,
#Partially deleted in new
chr17	39619612	39622513	chr17:39619612-39622513	3	+	39619612	39619612	8553170	4	49,76,53,438,	0,140,2231,2463,
#Partially deleted in new
chr17	39626739	39636000	chr17:39626739-39636000	1	+	39627392	39635865	789624	8	201,168,61,23,76,204,120,185,	0,566,2430,2800,3232,7143,8867,9076,
#Partially deleted in new
chr17	39626923	39636626	chr17:39626923-39636626	3	+	39627392	39635865	789624	7	550,61,23,76,204,120,811,	0,2246,2616,3048,6959,8683,8892,
#Partially deleted in new
chr17	39626951	39634084	chr17:39626951-39634084	0	+	39627392	39634084	789624	5	513,61,23,76,202,	0,2218,2588,3020,6931,
#Partially deleted in new
chr17	39627199	39636622	chr17:39627199-39636622	1	+	39627392	39635865	789624	5	274,61,204,120,807,	0,1970,6683,8407,8616,
#Partially deleted in new
chr17	39628497	39636625	chr17:39628497-39636625	1	+	39629196	39635865	789624	7	125,61,23,76,204,120,810,	0,672,1042,1474,5385,7109,7318,
#Partially deleted in new
chr17	39628497	39636626	chr17:39628497-39636626	1	+	39629196	39635865	789624	7	209,61,23,76,204,120,811,	0,672,1042,1474,5385,7109,7318,
#Deleted in new
chr17	39628525	39630452	chr17:39628525-39630452	0	+	39628525	39628525	8553170	4	181,61,23,481,	0,644,1014,1446,
#Partially deleted in new
chr17	39629373	39635721	chr17:39629373-39635721	0	+	39629373	39629373	8553170	4	189,76,204,115,	0,598,4509,6233,
#Partially deleted in new
chr17	39629404	39636624	chr17:39629404-39636624	0	+	39629404	39629404	8553170	4	158,204,120,809,	0,4478,6202,6411,
#Partially deleted in new
chr17	39632137	39636625	chr17:39632137-39636625	0	+	39632137	39632137	8553170	3	1949,120,810,	0,3469,3678,
#Partially deleted in new
chr17	39637064	39663484	chr17:39637064-39663484	3	+	39653531	39662908	0	15	167,270,78,78,54,118,99,56,93,63,96,80,105,94,681,	0,16416,19943,20710,20908,21340,21657,21986,22396,23146,23366,23745,23916,25186,25739,
#Partially deleted in new
chr17	39637089	39659553	chr17:39637089-39659553	0	+	39637089	39637089	8553170	9	142,133,78,78,54,118,99,56,93,	0,16528,19918,20685,20883,21315,21632,21961,22371,
#Partially deleted in new
chr17	39637138	39657887	chr17:39637138-39657887	0	+	39637138	39637138	8553170	4	93,270,78,113,	0,16342,19869,20636,
#Partially deleted in new
chr17	39637139	39657798	chr17:39637139-39657798	0	+	39637139	39637139	8553170	4	92,270,176,24,	0,16341,19770,20635,
#Partially deleted in new
chr17	39637140	39663094	chr17:39637140-39663094	1	+	39653531	39662908	0	15	91,270,78,65,54,118,112,56,93,63,96,80,105,94,291,	0,16340,19867,20634,20832,21264,21568,21910,22320,23070,23290,23669,23840,25110,25663,
#Partially deleted in new
chr17	39637141	39663007	chr17:39637141-39663007	0	+	39653531	39660271	789624	14	90,270,78,65,118,99,56,93,63,96,80,105,94,204,	0,16339,19866,20633,21263,21580,21909,22319,23069,23289,23668,23839,25109,25662,
#Partially deleted in new
chr17	39637141	39658819	chr17:39637141-39658819	0	+	39637141	39637141	8553170	5	90,270,78,65,847,	0,16339,19866,20633,20831,
#Partially deleted in new
chr17	39637143	39663434	chr17:39637143-39663434	1	+	39653531	39662908	0	14	88,270,78,78,118,99,56,93,63,96,80,105,94,631,	0,16337,19864,20631,21261,21578,21907,22317,23067,23287,23666,23837,25107,25660,
#Partially deleted in new
chr17	39637146	39658458	chr17:39637146-39658458	0	+	39653531	39658458	789624	6	85,235,78,65,54,54,	0,16369,19861,20628,20826,21258,
#Partially deleted in new
chr17	39637152	39663484	chr17:39637152-39663484	1	+	39653531	39663053	789624	14	79,270,78,54,118,99,56,93,63,96,80,105,117,681,	0,16328,20622,20820,21252,21569,21898,22308,23058,23278,23657,23828,25098,25651,
#Partially deleted in new
chr17	39637161	39658296	chr17:39637161-39658296	0	+	39637161	39637161	8553170	6	70,270,78,65,54,29,	0,16319,19846,20613,20811,21106,
#Partially deleted in new
chr17	39637369	39657830	chr17:39637369-39657830	0	+	39653531	39657830	789624	4	146,270,78,56,	0,16111,19638,20405,
#Partially deleted in new
chr17	39652488	39657052	chr17:39652488-39657052	0	+	39653531	39657052	789624	3	243,270,45,	0,992,4519,
#Partially deleted in new
chr17	39652777	39658460	chr17:39652777-39658460	0	+	39653531	39658460	789624	6	43,270,78,78,54,56,	0,703,4230,4997,5195,5627,
#Partially deleted in new
chr17	39653048	39658693	chr17:39653048-39658693	0	+	39653048	39653048	8553170	6	147,270,78,78,54,289,	0,432,3959,4726,4924,5356,
#Partially deleted in new
chr17	39653097	39663484	chr17:39653097-39663484	0	+	39653097	39653097	8553170	14	61,270,78,78,550,99,56,93,63,96,80,105,94,681,	0,383,3910,4677,4875,5624,5953,6363,7113,7333,7712,7883,9153,9706,
#Partially deleted in new
chr17	39653124	39658762	chr17:39653124-39658762	0	+	39653531	39658762	789624	7	34,270,78,78,54,118,41,	0,356,3883,4650,4848,5280,5597,
#Partially deleted in new
chr17	39653499	39658001	chr17:39653499-39658001	0	+	39653499	39653499	8553170	4	251,188,78,67,	0,3398,4275,4435,
#Partially deleted in new
chr17	39653534	39658776	chr17:39653534-39658776	0	+	39653534	39653534	8553170	6	216,78,78,54,110,55,	0,3473,4240,4438,4878,5187,
#Deleted in new
chr17	39657910	39663484	chr17:39657910-39663484	0	+	39657910	39657910	8553170	6	910,56,1066,80,105,1234,	0,1140,1550,2899,3070,4340,
#Deleted in new
chr17	39658393	39663433	chr17:39658393-39663433	0	+	39658393	39658393	8553170	9	129,56,93,63,96,80,105,94,630,	0,657,1067,1817,2037,2416,2587,3857,4410,
#Deleted in new
chr17	39658445	39663469	chr17:39658445-39663469	0	+	39658445	39658445	8553170	7	375,56,1066,80,105,94,666,	0,605,1015,2364,2535,3805,4358,
#Deleted in new
chr17	39658988	39663469	chr17:39658988-39663469	0	+	39658988	39658988	8553170	6	118,1066,80,105,94,666,	0,472,1821,1992,3262,3815,
#Deleted in new
chr17	39659063	39662321	chr17:39659063-39662321	0	+	39659063	39660210	789624	7	43,93,114,96,80,105,71,	0,397,1096,1367,1746,1917,3187,
#Deleted in new
chr17	39660195	39662896	chr17:39660195-39662896	0	+	39660195	39660195	8553170	5	78,96,80,105,93,	0,235,614,785,2608,
#Deleted in new
chr17	39660219	39662479	chr17:39660219-39662479	0	+	39660219	39660219	8553170	4	307,80,105,229,	0,590,761,2031,
#Deleted in new
chr17	39660285	39661321	chr17:39660285-39661321	0	+	39660285	39660285	8553170	3	241,80,341,	0,524,695,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	39664186	39666555	chr17:39664186-39666555	3	+	39665359	39666109	0	2	1283,840,	0,1529,
#Deleted in new
chr17	39665348	39666249	chr17:39665348-39666249	1	+	39665359	39666109	789624	3	121,64,398,	0,367,503,
#Partially deleted in new
chr17	39667980	39670473	chr17:39667980-39670473	1	+	39669720	39670389	789624	3	90,208,523,	0,1648,1970,
#Partially deleted in new
chr17	39668157	39670475	chr17:39668157-39670475	3	+	39668475	39670389	0	3	520,208,525,	0,1471,1793,
#Partially deleted in new
chr17	39668462	39670090	chr17:39668462-39670090	1	+	39668475	39669840	789624	2	215,462,	0,1166,
#Partially deleted in new
chr17	39671121	39688107	chr17:39671121-39688107	3	-	39672802	39688014	789624	8	1745,205,137,62,63,153,98,274,	0,1929,2392,2871,3495,13475,14800,16712,
#Partially deleted in new
chr17	39671121	39688057	chr17:39671121-39688057	1	-	39672851	39688014	789624	4	1745,153,98,224,	0,13475,14800,16712,
#Partially deleted in new
chr17	39671122	39688057	chr17:39671122-39688057	0	-	39671122	39671122	8553170	7	1744,205,541,63,153,98,224,	0,1928,2391,3494,13474,14799,16711,
#Partially deleted in new
chr17	39671122	39688057	chr17:39671122-39688057	1	-	39672802	39688014	789624	7	1744,205,137,62,63,98,224,	0,1928,2391,2870,3494,14799,16711,
#Partially deleted in new
chr17	39671122	39684616	chr17:39671122-39684616	1	-	39671968	39672691	789624	5	1744,205,62,63,20,	0,1928,2870,3494,13474,
#Partially deleted in new
chr17	39672775	39688057	chr17:39672775-39688057	1	-	39672802	39688014	789624	7	91,205,137,62,153,98,224,	0,275,738,1217,11821,13146,15058,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	39673174	39684698	chr17:39673174-39684698	0	-	39676722	39684698	789624	6	81,137,62,63,142,102,	0,339,818,1442,3439,11422,
#Partially deleted in new
chr17	39673528	39684905	chr17:39673528-39684905	0	-	39673528	39673528	8553170	4	122,62,63,309,	0,464,1088,11068,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	39673874	39688001	chr17:39673874-39688001	0	-	39676722	39688001	789624	6	180,63,142,153,98,168,	0,742,2739,10722,12047,13959,
#Partially deleted in new
chr17	39673940	39688049	chr17:39673940-39688049	0	-	39673940	39673940	8553170	4	114,63,153,216,	0,676,10656,13893,
#Partially deleted in new
chr17	39684601	39696797	chr17:39684601-39696797	0	-	39684601	39685984	789624	3	148,98,292,	0,1320,11904,
#Partially deleted in new
chr17	39694930	39728662	chr17:39694930-39728662	1	+	39707006	39728044	0	27	251,152,214,135,69,116,142,120,127,74,91,200,133,91,161,48,139,123,99,186,156,76,147,98,189,253,974,	0,12059,13390,14387,14882,15155,15409,16997,17391,20355,20515,20809,21370,21584,22389,24856,28388,28607,28981,29795,30118,30396,30776,31631,31884,32364,32758,
#Partially deleted in new
chr17	39699559	39728662	chr17:39699559-39728662	1	+	39699559	39728044	0	27	28,152,214,135,69,116,142,120,127,74,91,200,133,91,161,48,139,123,99,186,156,76,147,98,189,253,974,	0,7430,8761,9758,10253,10526,10780,12368,12762,15726,15886,16180,16741,16955,17760,20227,23759,23978,24352,25166,25489,25767,26147,27002,27255,27735,28129,
#Partially deleted in new
chr17	39699975	39728079	chr17:39699975-39728079	1	+	39700238	39728044	789624	21	336,120,127,74,91,200,133,91,161,48,139,123,99,186,156,76,147,98,189,253,391,	0,11952,12346,15310,15470,15764,16325,16539,17344,19811,23343,23562,23936,24750,25073,25351,25731,26586,26839,27319,27713,
#Partially deleted in new
chr17	39700023	39728044	chr17:39700023-39728044	1	+	39700238	39727697	789624	26	288,152,214,135,69,116,142,120,127,74,91,200,133,91,161,48,139,123,99,186,156,76,147,98,189,356,	0,6966,8297,9294,9789,10062,10316,11904,12298,15262,15422,15716,16277,16491,17296,19763,23295,23514,23888,24702,25025,25303,25683,26538,26791,27665,
#Partially deleted in new
chr17	39700073	39716311	chr17:39700073-39716311	0	+	39700238	39711993	789624	8	238,152,120,127,74,91,200,11,	0,6916,11854,12248,15212,15372,15666,16227,
#Partially deleted in new
chr17	39700073	39717655	chr17:39700073-39717655	0	+	39700073	39700073	8553170	8	238,152,120,127,74,91,866,336,	0,6916,11854,12248,15212,15372,15666,17246,
#Partially deleted in new
chr17	39700079	39728662	chr17:39700079-39728662	3	+	39700238	39728044	0	27	232,152,214,135,69,116,142,120,127,74,91,200,133,91,161,48,139,123,99,186,156,76,147,98,189,253,974,	0,6910,8241,9238,9733,10006,10260,11848,12242,15206,15366,15660,16221,16435,17240,19707,23239,23458,23832,24646,24969,25247,25627,26482,26735,27215,27609,
#Partially deleted in new
chr17	39700079	39728577	chr17:39700079-39728577	0	+	39700238	39707189	789624	27	232,215,214,135,69,116,142,120,127,74,91,200,133,91,161,48,139,123,99,186,156,76,147,98,189,253,889,	0,6910,8241,9238,9733,10006,10260,11848,12242,15206,15366,15660,16221,16435,17240,19707,23239,23458,23832,24646,24969,25247,25627,26482,26735,27215,27609,
#Partially deleted in new
chr17	39700226	39712330	chr17:39700226-39712330	0	+	39700226	39700226	8553170	8	85,152,214,135,69,116,142,403,	0,6763,8094,9091,9586,9859,10113,11701,
#Partially deleted in new
chr17	39703193	39708492	chr17:39703193-39708492	0	+	39707006	39708492	789624	3	235,152,172,	0,3796,5127,
#Partially deleted in new
chr17	39706748	39709385	chr17:39706748-39709385	0	+	39706748	39706748	8553170	4	149,152,214,68,	0,241,1572,2569,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr17	39707403	39726351	chr17:39707403-39726351	0	+	39707403	39707403	8553170	17	1131,135,69,116,142,120,127,74,91,866,161,48,139,123,99,186,1303,	0,1914,2409,2682,2936,4524,4918,7882,8042,8336,9916,12383,15915,16134,16508,17322,17645,
#Deleted in new
chr17	39709243	39710410	chr17:39709243-39710410	0	+	39709243	39709243	8553170	4	209,69,116,71,	0,569,842,1096,
#Partially deleted in new
chr17	39716550	39723950	chr17:39716550-39723950	0	+	39716550	39723950	789624	6	55,161,48,139,87,39,	0,769,3236,6768,6987,7361,
#Partially deleted in new
chr17	39716973	39723968	chr17:39716973-39723968	0	+	39716973	39716973	8553170	5	507,48,139,123,57,	0,2813,6345,6564,6938,
#Partially deleted in new
chr17	39717342	39720297	chr17:39717342-39720297	0	+	39717342	39717342	8553170	2	138,511,	0,2444,
#Partially deleted in new
chr17	39717428	39725203	chr17:39717428-39725203	0	+	39717428	39725203	789624	6	52,139,123,99,186,155,	0,5890,6109,6483,7297,7620,
#Deleted in new
chr17	39726494	39726561	chr17:39726494-39726561	3	+	39726494	39726494	5263520	1	67,	0,
#Deleted in new
chr17	39728385	39730426	chr17:39728385-39730426	0	+	39728385	39728385	8553170	2	96,404,	0,1637,
#Deleted in new
chr17	39728495	39730494	chr17:39728495-39730494	0	-	39728495	39728495	8553170	1	1999,	0,
#Deleted in new
chr17	39729155	39730787	chr17:39729155-39730787	3	-	39729521	39730495	0	4	450,77,98,381,	0,529,1038,1251,
#Deleted in new
chr17	39729155	39730491	chr17:39729155-39730491	0	-	39729155	39729155	8553170	3	450,77,298,	0,529,1038,
#Deleted in new
chr17	39729155	39730532	chr17:39729155-39730532	0	-	39729155	39729155	8553170	3	450,77,179,	0,529,1198,
#Deleted in new
chr17	39729157	39730510	chr17:39729157-39730510	1	-	39729597	39730495	789624	3	604,98,104,	0,1036,1249,
#Deleted in new
chr17	39729159	39730516	chr17:39729159-39730516	0	-	39729159	39729159	8553170	2	602,323,	0,1034,
#Partially deleted in new
chr17	39737926	39747284	chr17:39737926-39747284	3	+	39742301	39746897	0	15	207,205,151,157,122,78,138,111,99,81,117,61,88,94,534,	0,4325,4639,4971,5253,5466,6143,6626,6959,7316,7495,7801,7986,8182,8824,
#Partially deleted in new
chr17	39737926	39742922	chr17:39737926-39742922	0	+	39742301	39742922	789624	4	207,205,151,49,	0,4325,4639,4947,
#Partially deleted in new
chr17	39737948	39743054	chr17:39737948-39743054	0	+	39737948	39737948	8553170	3	185,205,489,	0,4303,4617,
#Partially deleted in new
chr17	39737961	39743281	chr17:39737961-39743281	0	+	39742301	39742977	789624	4	172,164,122,102,	0,4290,4971,5218,
#Deleted in new
chr17	39737973	39738982	chr17:39737973-39738982	0	+	39737973	39737973	8553170	2	160,410,	0,599,
#Partially deleted in new
chr17	39738305	39744604	chr17:39738305-39744604	0	+	39738305	39738305	8553170	7	87,205,489,97,78,138,52,	0,3946,4260,4874,5087,5764,6247,
#Partially deleted in new
chr17	39738336	39747285	chr17:39738336-39747285	1	+	39742301	39746897	0	15	56,205,151,157,122,78,138,111,99,81,117,61,88,94,535,	0,3915,4229,4561,4843,5056,5733,6216,6549,6906,7085,7391,7576,7772,8414,
#Partially deleted in new
chr17	39738352	39744103	chr17:39738352-39744103	0	+	39738352	39738352	8553170	6	40,205,151,122,78,34,	0,3899,4213,4827,5040,5717,
#Partially deleted in new
chr17	39738770	39747291	chr17:39738770-39747291	1	+	39738905	39746897	0	15	154,205,151,157,122,78,138,111,99,81,117,61,88,94,541,	0,3481,3795,4127,4409,4622,5299,5782,6115,6472,6651,6957,7142,7338,7980,
#Partially deleted in new
chr17	39739966	39746988	chr17:39739966-39746988	1	+	39742301	39746897	0	15	215,205,151,157,122,78,138,111,99,81,117,61,88,94,238,	0,2285,2599,2931,3213,3426,4103,4586,4919,5276,5455,5761,5946,6142,6784,
#Partially deleted in new
chr17	39740131	39742894	chr17:39740131-39742894	0	+	39740131	39740131	8553170	3	50,205,329,	0,2120,2434,
#Partially deleted in new
chr17	39742251	39747003	chr17:39742251-39747003	1	+	39742301	39746182	0	13	205,151,157,122,78,138,111,99,81,117,61,94,253,	0,314,646,928,1141,1818,2301,2634,2991,3170,3476,3857,4499,
#Deleted in new
chr17	39742933	39743612	chr17:39742933-39743612	0	+	39742933	39742933	8553170	2	121,433,	0,246,
#Partially deleted in new
chr17	39743271	39744428	chr17:39743271-39744428	0	+	39743271	39743271	8553170	3	30,78,359,	0,121,798,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	39757714	39864188	chr17:39757714-39864188	3	-	39765789	39864126	789624	8	8779,117,117,168,261,102,54,69,	0,19936,30543,33701,34958,71672,74383,106405,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	39757720	39864188	chr17:39757720-39864188	1	-	39765789	39777735	789624	9	8773,117,126,117,168,261,102,54,69,	0,19930,20164,30537,33695,34952,71666,74377,106399,
#Partially deleted in new
chr17	39765283	39864188	chr17:39765283-39864188	0	-	39777927	39864126	789624	9	1210,117,126,117,168,261,102,54,69,	0,12367,12601,22974,26132,27389,64103,66814,98836,
#Partially deleted in new
chr17	39765283	39864188	chr17:39765283-39864188	0	-	39777927	39864126	789624	8	1210,117,126,117,261,102,54,69,	0,12367,12601,22974,27389,64103,66814,98836,
#Partially deleted in new
chr17	39765283	39864188	chr17:39765283-39864188	1	-	39765789	39864126	789624	6	1210,117,117,102,54,69,	0,12367,22974,64103,66814,98836,
#Partially deleted in new
chr17	39765283	39864188	chr17:39765283-39864188	1	-	39765789	39864126	789624	5	1210,261,102,54,69,	0,27389,64103,66814,98836,
#Partially deleted in new
chr17	39765283	39864188	chr17:39765283-39864188	1	-	39765789	39864126	789624	4	1210,102,54,69,	0,64103,66814,98836,
#Partially deleted in new
chr17	39765283	39864188	chr17:39765283-39864188	1	-	39765789	39864126	789624	7	1210,117,117,168,102,54,69,	0,12367,22974,26132,64103,66814,98836,
#Partially deleted in new
chr17	39765283	39864188	chr17:39765283-39864188	1	-	39765789	39864126	789624	5	1210,117,102,54,69,	0,12367,64103,66814,98836,
#Partially deleted in new
chr17	39765283	39864188	chr17:39765283-39864188	1	-	39765789	39864126	789624	6	1210,117,168,261,54,69,	0,12367,26132,27389,66814,98836,
#Partially deleted in new
chr17	39765283	39864188	chr17:39765283-39864188	1	-	39765789	39864126	789624	7	1210,117,117,168,261,54,69,	0,12367,22974,26132,27389,66814,98836,
#Partially deleted in new
chr17	39765495	39778225	chr17:39765495-39778225	1	-	39765789	39777735	789624	3	998,117,341,	0,12155,12389,
#Partially deleted in new
chr17	39765789	39864126	chr17:39765789-39864126	1	-	39765789	39864126	789624	6	704,168,261,102,54,7,	0,25626,26883,63597,66308,98330,
#Partially deleted in new
chr17	39765789	39864126	chr17:39765789-39864126	1	-	39765789	39864126	789624	7	704,117,168,261,102,54,7,	0,22468,25626,26883,63597,66308,98330,
#Partially deleted in new
chr17	39765789	39864126	chr17:39765789-39864126	1	-	39765789	39864126	789624	7	704,117,168,261,102,54,7,	0,11861,25626,26883,63597,66308,98330,
#Partially deleted in new
chr17	39765789	39864127	chr17:39765789-39864127	1	-	39765789	39864126	789624	6	704,117,261,102,54,8,	0,11861,26883,63597,66308,98330,
#Partially deleted in new
chr17	39765789	39864126	chr17:39765789-39864126	1	-	39765789	39864126	789624	7	704,117,117,261,102,54,7,	0,11861,22468,26883,63597,66308,98330,
#Deleted in new
chr17	39835036	39836080	chr17:39835036-39836080	7	-	39835036	39835036	16724991	1	1044,	0,
#Deleted in new
chr17	39839368	39839524	chr17:39839368-39839524	7	-	39839368	39839368	16724991	1	156,	0,
#Partially deleted in new
chr17	39868163	39877144	chr17:39868163-39877144	3	+	39868354	39876809	789624	8	243,66,126,162,219,83,181,463,	0,385,2530,3300,4106,4880,7090,8518,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	39868215	39877896	chr17:39868215-39877896	1	+	39868354	39876809	789624	7	191,126,162,219,83,181,1215,	0,2478,3248,4054,4828,7038,8466,
#Partially deleted in new
chr17	39868215	39876802	chr17:39868215-39876802	0	+	39868354	39876802	789624	5	191,219,83,181,121,	0,4054,4828,7038,8466,
#Partially deleted in new
chr17	39868215	39877149	chr17:39868215-39877149	1	+	39868354	39876809	789624	7	191,66,126,162,83,181,468,	0,333,2478,3248,4828,7038,8466,
#Partially deleted in new
chr17	39904594	39918590	chr17:39904594-39918590	1	-	39904811	39917316	789624	10	370,71,139,161,27,85,169,172,249,57,	0,831,1252,1516,2366,4363,5161,7731,12487,13939,
#Partially deleted in new
chr17	39904594	39917316	chr17:39904594-39917316	1	-	39904811	39917316	789624	10	370,71,139,161,27,39,85,169,172,235,	0,831,1252,1516,2366,3581,4363,5161,7731,12487,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	39904594	39917540	chr17:39904594-39917540	3	-	39904811	39917316	789624	8	370,71,139,161,85,169,172,459,	0,831,1252,1516,4363,5161,7731,12487,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	39904594	39907739	chr17:39904594-39907739	0	-	39904594	39904594	8553170	4	370,71,139,1629,	0,831,1252,1516,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	39904595	39919854	chr17:39904595-39919854	0	-	39904595	39904595	8553170	8	369,71,139,877,85,169,172,2773,	0,830,1251,1515,4362,5160,7730,12486,
#Partially deleted in new
chr17	39904596	39917316	chr17:39904596-39917316	1	-	39904811	39917316	789624	9	368,71,139,161,27,85,169,172,235,	0,829,1250,1514,2364,4361,5159,7729,12485,
#Partially deleted in new
chr17	39904596	39918650	chr17:39904596-39918650	1	-	39904811	39917316	789624	11	368,71,139,161,27,39,85,169,172,249,117,	0,829,1250,1514,2364,3579,4361,5159,7729,12485,13937,
#Partially deleted in new
chr17	39904596	39918635	chr17:39904596-39918635	1	-	39904811	39917316	789624	10	368,71,139,161,39,85,169,172,240,102,	0,829,1250,1514,3579,4361,5159,7729,12485,13937,
#Partially deleted in new
chr17	39904811	39917316	chr17:39904811-39917316	0	-	39906153	39917316	789624	7	153,71,139,161,27,172,235,	0,614,1035,1299,2149,7514,12270,
#Partially deleted in new
chr17	39904811	39917316	chr17:39904811-39917316	0	-	39906960	39917316	789624	8	153,71,139,161,27,169,172,235,	0,614,1035,1299,2149,4944,7514,12270,
#Partially deleted in new
chr17	39904811	39917316	chr17:39904811-39917316	0	-	39906235	39917316	789624	7	153,71,139,161,169,172,235,	0,614,1035,1299,4944,7514,12270,
#Partially deleted in new
chr17	39905270	39905938	chr17:39905270-39905938	0	-	39905270	39905270	8553170	2	226,92,	0,576,
#Partially deleted in new
chr17	39905964	39912343	chr17:39905964-39912343	0	-	39906235	39912343	789624	4	21,161,169,18,	0,146,3791,6361,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	39906194	39907499	chr17:39906194-39907499	0	-	39906194	39906194	8553170	2	77,539,	0,766,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	39909452	39917147	chr17:39909452-39917147	0	-	39909452	39909452	8553170	3	472,172,66,	0,2873,7629,
#Deleted in new
chr17	39921040	39927601	chr17:39921040-39927601	1	-	39922549	39924203	789624	4	1645,152,196,118,	0,2071,2989,6443,
#Deleted in new
chr17	39921040	39927601	chr17:39921040-39927601	3	-	39922549	39924203	789624	4	1645,152,191,118,	0,2071,2989,6443,
#Deleted in new
chr17	39921042	39921749	chr17:39921042-39921749	0	-	39921042	39921042	8553170	2	275,74,	0,633,
#Deleted in new
chr17	39922097	39924048	chr17:39922097-39924048	0	-	39922549	39924048	789624	4	202,188,152,19,	0,400,1014,1932,
#Deleted in new
chr17	39922276	39926841	chr17:39922276-39926841	1	-	39922549	39924203	789624	6	409,152,196,51,203,1219,	0,835,1753,2478,2892,3346,
#Deleted in new
chr17	39922549	39924203	chr17:39922549-39924203	1	-	39922549	39924203	789624	3	136,152,126,	0,562,1528,
#Deleted in new
chr17	39922624	39927229	chr17:39922624-39927229	0	-	39922624	39924203	789624	4	61,152,196,163,	0,487,1405,4442,
#Deleted in new
chr17	39925795	39926846	chr17:39925795-39926846	0	-	39925795	39925795	8553170	2	544,30,	0,1021,
#Deleted in new
chr17	39927741	39929470	chr17:39927741-39929470	1	+	39927741	39927741	8553170	2	73,363,	0,1366,
#Deleted in new
chr17	39927843	39929355	chr17:39927843-39929355	0	+	39927843	39927843	8553170	2	58,248,	0,1264,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	39927866	39939601	chr17:39927866-39939601	3	+	39927866	39927866	8553170	5	35,126,114,93,264,	0,1241,6744,7935,11471,
#Deleted in new
chr17	39941473	39944747	chr17:39941473-39944747	3	+	39941523	39944734	789624	2	76,815,	0,2459,
#Partially deleted in new
chr17	39953262	39977218	chr17:39953262-39977218	3	+	39965687	39977058	789624	12	43,219,178,166,97,48,27,21,155,115,74,403,	0,12420,12997,17219,18261,18866,19324,20547,21010,21637,22661,23553,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	39962972	39977766	chr17:39962972-39977766	1	+	39965687	39977058	789624	12	113,219,178,166,97,48,27,21,155,115,74,951,	0,2710,3287,7509,8551,9156,9614,10837,11300,11927,12951,13843,
#Partially deleted in new
chr17	39965522	39970565	chr17:39965522-39970565	0	+	39965687	39970565	789624	4	66,219,178,84,	0,160,737,4959,
#Partially deleted in new
chr17	39980796	39997960	chr17:39980796-39997960	3	+	39980970	39997581	0	12	394,191,138,137,191,104,115,120,104,156,51,457,	0,3497,5778,7886,8942,9297,14157,14379,14627,15386,16533,16707,
#Partially deleted in new
chr17	39980835	39997611	chr17:39980835-39997611	0	+	39980970	39986689	789624	13	255,26,138,137,191,104,115,120,104,156,93,51,108,	0,3623,5739,7847,8903,9258,14118,14340,14588,15347,15865,16494,16668,
#Partially deleted in new
chr17	39986608	39997955	chr17:39986608-39997955	0	+	39986608	39997850	789624	4	104,137,55,162,	0,2074,3130,11185,
#Partially deleted in new
chr17	39986683	39990152	chr17:39986683-39990152	0	+	39986683	39986683	8553170	3	29,137,414,	0,1999,3055,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	39992997	39996120	chr17:39992997-39996120	0	+	39992997	39992997	8553170	3	2071,120,697,	0,2178,2426,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	40012225	40014629	chr17:40012225-40014629	3	-	40012225	40012225	8553170	2	579,205,	0,2199,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	40012543	40014705	chr17:40012543-40014705	1	-	40012543	40012543	8553170	3	261,122,152,	0,1694,2010,
#Deleted in new
chr17	40015360	40017813	chr17:40015360-40017813	1	+	40015474	40016959	0	5	154,155,108,147,1019,	0,330,872,1124,1434,
#Deleted in new
chr17	40015360	40016917	chr17:40015360-40016917	0	+	40015474	40016917	789624	4	154,155,147,123,	0,330,1124,1434,
#Deleted in new
chr17	40015434	40016162	chr17:40015434-40016162	0	+	40015434	40015434	8553170	2	80,472,	0,256,
#Deleted in new
chr17	40015443	40017813	chr17:40015443-40017813	3	+	40015474	40016959	0	5	71,164,108,147,1019,	0,247,789,1041,1351,
#Deleted in new
chr17	40015445	40017758	chr17:40015445-40017758	0	+	40015474	40016510	789624	4	69,108,147,964,	0,787,1039,1349,
#Deleted in new
chr17	40015446	40017813	chr17:40015446-40017813	1	+	40015662	40016959	789624	4	399,108,147,1019,	0,786,1038,1348,
#Deleted in new
chr17	40015446	40016943	chr17:40015446-40016943	0	+	40015446	40015446	8553170	3	399,399,149,	0,786,1348,
#Deleted in new
chr17	40015466	40017057	chr17:40015466-40017057	1	+	40015474	40016959	0	4	48,164,147,263,	0,224,1018,1328,
#Deleted in new
chr17	40015486	40017648	chr17:40015486-40017648	1	+	40015662	40016959	789624	3	359,147,854,	0,998,1308,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr17	40019096	40054092	chr17:40019096-40054092	1	-	40019528	40053673	789624	25	549,149,81,100,91,182,265,176,100,179,83,38,143,112,87,83,48,114,151,112,233,74,39,83,624,	0,688,1176,2858,3297,3548,4034,7059,7550,7759,8286,8812,9729,10651,12062,12441,12946,13552,13959,14248,16020,16625,17019,34201,34372,
#Partially deleted in new
chr17	40019097	40054407	chr17:40019097-40054407	1	-	40019528	40053598	789624	25	548,149,81,100,91,182,265,176,100,179,83,38,143,112,87,83,48,114,151,112,233,74,83,167,47,	0,687,1175,2857,3296,3547,4033,7058,7549,7758,8285,8811,9728,10650,12061,12440,12945,13551,13958,14247,16019,16624,34200,34371,35263,
#Partially deleted in new
chr17	40019101	40054405	chr17:40019101-40054405	3	-	40019528	40053598	789624	26	544,149,81,100,91,182,265,176,100,179,83,38,143,112,87,83,48,114,151,112,233,74,39,83,167,45,	0,683,1171,2853,3292,3543,4029,7054,7545,7754,8281,8807,9724,10646,12057,12436,12941,13547,13954,14243,16015,16620,17014,34196,34367,35259,
#Partially deleted in new
chr17	40019107	40054405	chr17:40019107-40054405	1	-	40019528	40053598	789624	25	538,149,81,100,91,182,265,176,100,179,83,38,143,112,87,83,48,114,151,112,233,74,83,189,45,	0,677,1165,2847,3286,3537,4023,7048,7539,7748,8275,8801,9718,10640,12051,12430,12935,13541,13948,14237,16009,16614,34190,34361,35253,
#Partially deleted in new
chr17	40019128	40053615	chr17:40019128-40053615	1	-	40019151	40053598	789624	5	164,21,39,83,147,	0,16646,16987,34169,34340,
#Partially deleted in new
chr17	40019144	40022442	chr17:40019144-40022442	0	-	40019987	40022442	789624	5	501,226,81,100,49,	0,640,1128,2810,3249,
#Partially deleted in new
chr17	40019172	40054405	chr17:40019172-40054405	0	-	40035298	40053598	789624	25	473,149,81,100,91,182,265,176,100,179,83,38,143,112,87,83,48,114,151,112,233,39,83,167,45,	0,612,1100,2782,3221,3472,3958,6983,7474,7683,8210,8736,9653,10575,11986,12365,12870,13476,13883,14172,15944,16943,34125,34296,35188,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	40019448	40020610	chr17:40019448-40020610	0	-	40019448	40019448	8553170	2	485,338,	0,824,
#Partially deleted in new
chr17	40019502	40023160	chr17:40019502-40023160	0	-	40019528	40023160	789624	7	143,149,210,100,91,182,30,	0,282,770,2452,2891,3142,3628,
#Partially deleted in new
chr17	40019528	40053608	chr17:40019528-40053608	1	-	40019528	40053598	789624	26	117,149,81,100,91,182,265,176,100,179,83,38,143,112,87,83,48,114,151,112,57,233,74,39,83,140,	0,256,744,2426,2865,3116,3602,6627,7118,7327,7854,8380,9297,10219,11630,12009,12514,13120,13527,13816,15387,15588,16193,16587,33769,33940,
#Partially deleted in new
chr17	40022393	40054408	chr17:40022393-40054408	0	-	40022393	40053360	789624	21	91,182,265,176,100,179,83,38,143,112,87,83,48,114,151,112,233,74,39,83,48,	0,251,737,3762,4253,4462,4989,5515,6432,7354,8765,9144,9649,10255,10662,10951,12723,13328,13722,30904,31967,
#Deleted in new
chr17	40022411	40023651	chr17:40022411-40023651	0	-	40022411	40022411	8553170	3	73,182,521,	0,233,719,
#Partially deleted in new
chr17	40023141	40026450	chr17:40023141-40026450	0	-	40023141	40023141	8553170	2	254,295,	0,3014,
#Partially deleted in new
chr17	40023288	40054408	chr17:40023288-40054408	0	-	40023288	40036154	789624	18	107,176,100,179,83,38,179,112,87,83,48,114,151,112,233,74,39,48,	0,2867,3358,3567,4094,4620,5537,6459,7870,8249,8754,9360,9767,10056,11828,12433,12827,31072,
#Partially deleted in new
chr17	40023364	40027946	chr17:40023364-40027946	0	-	40027002	40027946	789624	5	31,176,100,179,38,	0,2791,3282,3491,4544,
#Partially deleted in new
chr17	40026177	40027523	chr17:40026177-40027523	0	-	40026177	40026177	8553170	4	154,100,179,141,	0,469,678,1205,
#Partially deleted in new
chr17	40026302	40028059	chr17:40026302-40028059	0	-	40026302	40026302	8553170	5	29,100,179,83,151,	0,344,553,1080,1606,
#Partially deleted in new
chr17	40026305	40027149	chr17:40026305-40027149	0	-	40026305	40026305	8553170	2	26,503,	0,341,
#Partially deleted in new
chr17	40026331	40026409	chr17:40026331-40026409	3	-	40026331	40026331	5263520	1	78,	0,
#Partially deleted in new
chr17	40027014	40053377	chr17:40027014-40053377	0	-	40031609	40053377	789624	10	20,83,38,143,112,87,83,48,34,80,	0,368,894,1811,2733,4144,4523,5028,9106,26283,
#Partially deleted in new
chr17	40027541	40027645	chr17:40027541-40027645	3	-	40027541	40027541	789624	1	104,	0,
#Deleted in new
chr17	40031167	40032433	chr17:40031167-40032433	0	-	40031167	40031167	8553170	3	78,83,391,	0,370,875,
#Deleted in new
chr17	40032670	40033646	chr17:40032670-40033646	0	-	40032670	40032670	8553170	3	92,117,302,	0,385,674,
#Deleted in new
chr17	40032672	40033675	chr17:40032672-40033675	0	-	40032672	40032672	8553170	3	90,151,331,	0,383,672,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	40032715	40053873	chr17:40032715-40053873	0	-	40032715	40053673	789624	7	47,151,112,233,74,83,405,	0,340,629,2401,3006,20582,20753,
#Partially deleted in new
chr17	40033055	40053312	chr17:40033055-40053312	0	-	40033733	40053312	789624	6	151,427,57,233,74,15,	0,289,1860,2061,2666,20242,
#Partially deleted in new
chr17	40033706	40054375	chr17:40033706-40054375	0	-	40033706	40033706	8553170	8	65,57,233,74,39,83,167,15,	0,1209,1410,2015,2409,19591,19762,20654,
#Partially deleted in new
chr17	40035142	40054413	chr17:40035142-40054413	0	-	40035142	40053673	789624	5	207,74,83,211,53,	0,579,18155,18326,19218,
#Partially deleted in new
chr17	40035197	40061215	chr17:40035197-40061215	0	-	40035197	40053598	789624	6	152,74,39,83,167,82,	0,524,918,18100,18271,25936,
#Partially deleted in new
chr17	40035261	40054413	chr17:40035261-40054413	0	-	40035261	40053673	789624	6	88,74,39,83,211,53,	0,460,854,18036,18207,19099,
#Partially deleted in new
chr17	40035284	40056690	chr17:40035284-40056690	0	-	40035284	40056627	789624	6	65,74,39,83,189,142,	0,437,831,18013,18184,21264,
#Partially deleted in new
chr17	40035295	40054416	chr17:40035295-40054416	0	-	40035295	40053673	789624	5	54,74,83,300,56,	0,426,18002,18173,19065,
#Partially deleted in new
chr17	40035321	40054416	chr17:40035321-40054416	0	-	40035321	40053673	789624	6	28,74,39,83,300,56,	0,400,794,17976,18147,19039,
#Partially deleted in new
chr17	40035900	40054408	chr17:40035900-40054408	0	-	40035900	40035900	8553170	4	254,83,189,48,	0,17397,17568,18460,
#Partially deleted in new
chr17	40053347	40054742	chr17:40053347-40054742	0	-	40053347	40053598	789624	3	33,189,382,	0,121,1013,
#Partially deleted in new
chr17	40058289	40076912	chr17:40058289-40076912	0	+	40074488	40076912	789624	3	189,350,42,	0,15902,18581,
#Partially deleted in new
chr17	40061903	40077604	chr17:40061903-40077604	0	+	40074488	40077604	789624	4	59,350,68,97,	0,12288,14967,15604,
#Partially deleted in new
chr17	40062192	40093613	chr17:40062192-40093613	1	+	40074488	40093382	0	10	259,350,68,101,148,206,147,259,128,594,	0,11999,14678,15315,21642,22417,24514,26049,27013,30827,
#Partially deleted in new
chr17	40062192	40083866	chr17:40062192-40083866	0	+	40074488	40083866	789624	5	356,350,68,101,32,	0,11999,14678,15315,21642,
#Partially deleted in new
chr17	40062809	40093867	chr17:40062809-40093867	1	+	40074488	40093382	0	10	283,350,68,101,148,206,147,259,128,848,	0,11382,14061,14698,21025,21800,23897,25432,26396,30210,
#Partially deleted in new
chr17	40062809	40093867	chr17:40062809-40093867	1	+	40074488	40093382	0	10	283,350,68,101,148,206,147,259,128,731,	0,11382,14061,14698,21025,21800,23897,25432,26396,30327,
#Partially deleted in new
chr17	40062898	40092627	chr17:40062898-40092627	3	+	40074488	40089456	0	9	194,350,68,101,148,206,147,259,3422,	0,11293,13972,14609,20936,21711,23808,25343,26307,
#Partially deleted in new
chr17	40068902	40089730	chr17:40068902-40089730	1	+	40074488	40089456	0	9	105,350,68,101,148,206,147,259,525,	0,5289,7968,8605,14932,15707,17804,19339,20303,
#Partially deleted in new
chr17	40072090	40077558	chr17:40072090-40077558	0	+	40074488	40077558	789624	4	94,350,68,51,	0,2101,4780,5417,
#Partially deleted in new
chr17	40084433	40087001	chr17:40084433-40087001	0	+	40084433	40084433	8553170	2	382,295,	0,2273,
#Partially deleted in new
chr17	40092786	40100725	chr17:40092786-40100725	3	-	40093082	40100094	0	8	496,211,186,644,145,89,339,662,	0,1125,2148,2657,3656,3904,4278,7277,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	40113214	40115442	chr17:40113214-40115442	3	-	40113214	40113214	8553170	1	2228,	0,
#Partially deleted in new
chr17	40122297	40136916	chr17:40122297-40136916	3	+	40122612	40134369	0	9	1083,224,383,48,65,68,125,73,2638,	0,3885,6947,9239,9736,10744,11236,11529,11981,
#Partially deleted in new
chr17	40122572	40130293	chr17:40122572-40130293	1	+	40122612	40129638	789624	3	808,224,1049,	0,3610,6672,
#Partially deleted in new
chr17	40122583	40134810	chr17:40122583-40134810	1	+	40122612	40134369	789624	8	797,224,383,65,68,125,73,532,	0,3599,6661,9450,10458,10950,11243,11695,
#Partially deleted in new
chr17	40122613	40134450	chr17:40122613-40134450	1	+	40126203	40134369	0	10	147,96,224,383,48,65,68,125,73,172,	0,671,3569,6631,8923,9420,10428,10920,11213,11665,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	40123096	40126860	chr17:40123096-40126860	0	+	40123096	40123096	8553170	2	284,678,	0,3086,
#Partially deleted in new
chr17	40124576	40129260	chr17:40124576-40129260	0	+	40124753	40129260	789624	3	285,224,16,	0,1606,4668,
#Partially deleted in new
chr17	40126392	40132042	chr17:40126392-40132042	0	+	40126392	40131263	789624	5	14,383,126,48,9,	0,2852,4827,5144,5641,
#Partially deleted in new
chr17	40130929	40133095	chr17:40130929-40133095	0	+	40130929	40130929	8553170	4	416,48,65,54,	0,607,1104,2112,
#Partially deleted in new
chr17	40131000	40136787	chr17:40131000-40136787	0	+	40131000	40131000	8553170	6	584,65,68,125,73,2509,	0,1033,2041,2533,2826,3278,
#Partially deleted in new
chr17	40131779	40133886	chr17:40131779-40133886	0	+	40131779	40131779	8553170	4	319,68,125,60,	0,1262,1754,2047,
#Partially deleted in new
chr17	40131990	40136118	chr17:40131990-40136118	0	+	40131990	40131990	8553170	4	108,617,73,1840,	0,1051,1836,2288,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	40140317	40167080	chr17:40140317-40167080	0	+	40140317	40140317	8553170	8	462,28,38,159,152,177,686,284,	0,889,1252,21435,21684,22407,23163,26479,
#Partially deleted in new
chr17	40140322	40172183	chr17:40140322-40172183	3	+	40140548	40169621	0	14	457,28,38,159,152,177,686,65,115,99,215,123,65,1737,	0,884,1247,21430,21679,22402,23158,26474,27175,27527,27880,29001,29275,30124,
#Partially deleted in new
chr17	40140536	40162023	chr17:40140536-40162023	0	+	40140536	40140536	8553170	4	243,28,38,271,	0,670,1033,21216,
#Deleted in new
chr17	40140543	40141547	chr17:40140543-40141547	0	+	40140543	40140543	8553170	2	236,341,	0,663,
#Partially deleted in new
chr17	40140841	40161864	chr17:40140841-40161864	0	+	40141185	40161864	789624	3	393,38,112,	0,728,20911,
#Partially deleted in new
chr17	40161796	40166857	chr17:40161796-40166857	0	+	40161796	40163989	789624	6	115,152,177,122,281,61,	0,205,928,1684,2089,5000,
#Deleted in new
chr17	40161932	40162001	chr17:40161932-40162001	3	+	40161932	40161932	5263520	1	69,	0,
#Partially deleted in new
chr17	40163911	40168255	chr17:40163911-40168255	0	+	40163911	40167439	789624	5	255,65,242,99,53,	0,2885,3459,3938,4291,
#Deleted in new
chr17	40167365	40168119	chr17:40167365-40168119	0	+	40167365	40167365	8553170	2	247,270,	0,484,
#Partially deleted in new
chr17	40167916	40169379	chr17:40167916-40169379	0	+	40167916	40167916	8553170	2	501,56,	0,1407,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	40168437	40172164	chr17:40168437-40172164	0	+	40168437	40168437	8553170	3	1009,65,1718,	0,1160,2009,
#Partially deleted in new
chr17	40177009	40193788	chr17:40177009-40193788	1	+	40177055	40193788	789624	15	113,79,136,98,113,168,98,123,179,91,51,88,65,55,125,	0,4606,7204,7571,11856,12198,13424,13630,14306,14572,15203,15596,15916,16353,16654,
#Partially deleted in new
chr17	40177054	40189326	chr17:40177054-40189326	0	+	40184232	40189326	789624	6	68,26,136,98,113,119,	0,4614,7159,7526,11811,12153,
#Partially deleted in new
chr17	40177076	40194190	chr17:40177076-40194190	1	+	40177235	40193788	789624	15	208,79,136,98,113,168,98,123,179,91,51,88,65,55,527,	0,4539,7137,7504,11789,12131,13357,13563,14239,14505,15136,15529,15849,16286,16587,
#Partially deleted in new
chr17	40177094	40195656	chr17:40177094-40195656	1	+	40184232	40193788	789624	15	92,79,136,98,113,168,98,123,179,91,51,88,65,55,1993,	0,4521,7119,7486,11771,12113,13339,13545,14221,14487,15118,15511,15831,16268,16569,
#Partially deleted in new
chr17	40177114	40184294	chr17:40177114-40184294	0	+	40184232	40184294	789624	5	72,120,188,79,81,	0,1147,4184,4501,7099,
#Partially deleted in new
chr17	40177494	40195616	chr17:40177494-40195616	3	+	40177861	40193788	789624	15	887,79,136,98,113,168,98,123,179,91,51,88,65,55,1953,	0,4121,6719,7086,11371,11713,12939,13145,13821,14087,14718,15111,15431,15868,16169,
#Partially deleted in new
chr17	40178248	40184308	chr17:40178248-40184308	0	+	40181360	40184308	789624	4	133,75,79,95,	0,3050,3367,5965,
#Partially deleted in new
chr17	40181238	40188954	chr17:40181238-40188954	0	+	40184232	40188954	789624	4	456,136,98,89,	0,2975,3342,7627,
#Partially deleted in new
chr17	40188537	40193831	chr17:40188537-40193831	0	+	40188537	40188537	8553170	11	441,168,98,123,179,91,51,88,65,55,168,	0,670,1896,2102,2778,3044,3675,4068,4388,4825,5126,
#Partially deleted in new
chr17	40189209	40191037	chr17:40189209-40191037	0	+	40189209	40189209	8553170	3	166,98,398,	0,1224,1430,
#Deleted in new
chr17	40191469	40192966	chr17:40191469-40192966	0	+	40191469	40191469	8553170	4	25,91,51,361,	0,112,743,1136,
#Deleted in new
chr17	40193596	40193663	chr17:40193596-40193663	3	+	40193596	40193596	789624	1	67,	0,
#Partially deleted in new
chr17	40219303	40277132	chr17:40219303-40277132	0	+	40273860	40277132	789624	4	189,132,210,50,	0,37087,54486,57779,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	40219321	40284136	chr17:40219321-40284136	3	+	40256459	40278225	789624	8	171,132,133,117,657,210,102,5952,	0,37069,41213,43203,45168,54468,57761,58863,
#Partially deleted in new
chr17	40219321	40278907	chr17:40219321-40278907	0	+	40219321	40219321	8553170	7	171,133,117,657,210,102,723,	0,41213,43203,45168,54468,57761,58863,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	40219325	40279869	chr17:40219325-40279869	0	+	40256459	40262608	789624	8	167,132,93,117,657,210,102,1685,	0,37065,41209,43199,45164,54464,57757,58859,
#Partially deleted in new
chr17	40219348	40279357	chr17:40219348-40279357	1	+	40256459	40278225	789624	8	169,132,133,117,657,210,102,1173,	0,37042,41186,43176,45141,54441,57734,58836,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	40219356	40279849	chr17:40219356-40279849	1	+	40256459	40278225	789624	6	136,132,133,210,102,1665,	0,37034,41178,54433,57726,58828,
#Partially deleted in new
chr17	40219789	40278231	chr17:40219789-40278231	1	+	40256459	40278225	789624	8	131,132,133,117,657,210,102,47,	0,36601,40745,42735,44700,54000,57293,58395,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	40219851	40262638	chr17:40219851-40262638	0	+	40256459	40262638	789624	5	69,124,132,133,114,	0,563,36539,40683,42673,
#Partially deleted in new
chr17	40256387	40260838	chr17:40256387-40260838	0	+	40256387	40256387	8553170	2	135,304,	0,4147,
#Partially deleted in new
chr17	40273612	40278249	chr17:40273612-40278249	0	+	40273612	40273612	8553170	3	387,102,65,	0,3470,4572,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	40287632	40304657	chr17:40287632-40304657	3	+	40289420	40302001	0	12	458,191,282,200,176,107,140,101,65,203,141,2746,	0,1775,3425,3836,5823,6317,6731,7723,9070,13195,13835,14279,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	40287882	40302917	chr17:40287882-40302917	1	+	40289420	40302001	789624	12	208,191,282,200,176,107,140,101,65,203,141,1006,	0,1525,3175,3586,5573,6067,6481,7473,8820,12945,13585,14029,
#Partially deleted in new
chr17	40287901	40291555	chr17:40287901-40291555	0	+	40289420	40291555	789624	4	136,191,282,87,	0,1506,3156,3567,
#Partially deleted in new
chr17	40287906	40291181	chr17:40287906-40291181	0	+	40289420	40291181	789624	3	226,191,124,	0,1501,3151,
#Partially deleted in new
chr17	40287932	40302236	chr17:40287932-40302236	1	+	40289420	40302001	789624	12	17,191,282,200,176,107,140,101,65,203,141,325,	0,1475,3125,3536,5523,6017,6431,7423,8770,12895,13535,13979,
#Partially deleted in new
chr17	40289191	40291234	chr17:40289191-40291234	0	+	40289420	40291234	789624	2	407,177,	0,1866,
#Partially deleted in new
chr17	40291466	40295506	chr17:40291466-40295506	0	+	40291466	40291466	8553170	2	202,151,	0,3889,
#Partially deleted in new
chr17	40300889	40301931	chr17:40300889-40301931	0	+	40300889	40300889	8553170	2	719,20,	0,1022,
#Partially deleted in new
chr17	40309191	40348336	chr17:40309191-40348336	0	+	40331218	40348336	789624	4	95,77,540,21,	0,17283,21665,39124,
#Partially deleted in new
chr17	40309193	40356796	chr17:40309193-40356796	3	+	40331218	40356226	0	9	93,540,149,142,161,177,205,159,788,	0,21663,39122,40590,42716,43137,45108,46069,46815,
#Partially deleted in new
chr17	40318280	40356331	chr17:40318280-40356331	1	+	40331218	40356226	0	9	168,540,149,142,161,177,205,159,323,	0,12576,30035,31503,33629,34050,36021,36982,37728,
#Partially deleted in new
chr17	40318284	40357643	chr17:40318284-40357643	1	+	40331218	40356226	0	7	164,540,161,177,205,159,1635,	0,12572,33625,34046,36017,36978,37724,
#Partially deleted in new
chr17	40322990	40331168	chr17:40322990-40331168	0	+	40322990	40322990	8553170	2	269,312,	0,7866,
#Deleted in new
chr17	40340866	40343136	chr17:40340866-40343136	3	-	40340866	40340866	789624	3	834,695,261,	0,1129,2009,
#Partially deleted in new
chr17	40341387	40356795	chr17:40341387-40356795	1	+	40341389	40356226	789624	8	228,149,142,161,177,205,159,787,	0,6928,8396,10522,10943,12914,13875,14621,
#Partially deleted in new
chr17	40342362	40356795	chr17:40342362-40356795	1	+	40342704	40356226	0	8	505,149,142,161,177,205,159,787,	0,5953,7421,9547,9968,11939,12900,13646,
#Deleted in new
chr17	40342398	40349818	chr17:40342398-40349818	0	+	40342398	40342398	8553170	4	308,72,149,35,	0,397,5917,7385,
#Partially deleted in new
chr17	40345240	40354409	chr17:40345240-40354409	0	+	40349813	40354409	789624	6	76,149,142,161,177,108,	0,3075,4543,6669,7090,9061,
#Deleted in new
chr17	40348048	40350539	chr17:40348048-40350539	3	-	40348048	40348048	8553170	1	2491,	0,
#Partially deleted in new
chr17	40351386	40356213	chr17:40351386-40356213	0	+	40351386	40351386	8553170	6	145,161,177,205,159,205,	0,523,944,2915,3876,4622,
#Deleted in new
chr17	40360654	40364693	chr17:40360654-40364693	3	+	40360654	40360654	8553170	2	483,1611,	0,2428,
#Deleted in new
chr17	40362930	40363815	chr17:40362930-40363815	3	-	40362930	40363815	789624	1	885,	0,
#Deleted in new
chr17	40367951	40368438	chr17:40367951-40368438	7	+	40367951	40367951	16724991	1	487,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	40374088	40374176	chr17:40374088-40374176	7	+	40374088	40374088	16724991	1	88,	0,
#Partially deleted in new
chr17	40380665	40381838	chr17:40380665-40381838	7	-	40380665	40380665	16724991	2	566,314,	0,859,
#Partially deleted in new
chr17	40388515	40417950	chr17:40388515-40417950	3	-	40389518	40417791	0	35	1132,200,135,44,124,153,91,183,84,165,92,196,201,135,232,149,122,115,93,110,106,111,126,158,139,138,102,174,213,98,146,64,91,156,180,	0,1449,2990,3552,3702,4069,6933,7767,10042,10257,10524,11356,11693,12013,12334,14390,15636,15861,16275,17868,18068,18316,19033,19451,19976,22593,22838,23129,24243,24679,24964,27489,27906,28224,29255,
#Partially deleted in new
chr17	40388525	40389602	chr17:40388525-40389602	0	-	40389518	40389602	789624	2	333,87,	0,990,
#Partially deleted in new
chr17	40389561	40392101	chr17:40389561-40392101	0	-	40389561	40389561	8553170	3	86,200,596,	0,403,1944,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	40391231	40391338	chr17:40391231-40391338	3	-	40391231	40391231	8553170	1	107,	0,
#Partially deleted in new
chr17	40396382	40399261	chr17:40396382-40399261	0	-	40396382	40396382	8553170	4	83,84,165,222,	0,2175,2390,2657,
#Partially deleted in new
chr17	40413479	40417705	chr17:40413479-40417705	0	-	40413479	40416880	789624	5	146,64,91,156,122,	0,2525,2942,3260,4104,
#Deleted in new
chr17	40439466	40439917	chr17:40439466-40439917	7	-	40439466	40439466	16724991	1	451,	0,
#Partially deleted in new
chr17	40443460	40457731	chr17:40443460-40457731	3	+	40443735	40456583	0	4	624,158,135,1283,	0,9524,10467,12988,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	40473553	40475289	chr17:40473553-40475289	3	-	40473553	40473553	8553170	1	1736,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	40475827	40501597	chr17:40475827-40501597	3	-	40477587	40496425	789624	13	1902,27,69,169,69,78,93,126,87,425,424,534,64,	0,2479,2752,3846,4872,6301,6496,8656,9093,11208,12718,20159,25706,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	40475827	40480875	chr17:40475827-40480875	0	-	40475827	40475827	8553170	4	1902,27,69,176,	0,2479,2752,4872,
#Deleted in new
chr17	40477803	40478648	chr17:40477803-40478648	0	-	40478302	40478648	789624	2	530,69,	0,776,
#Partially deleted in new
chr17	40478231	40480012	chr17:40478231-40480012	0	-	40478231	40478231	8553170	3	102,69,339,	0,348,1442,
#Partially deleted in new
chr17	40517025	40527002	chr17:40517025-40527002	3	+	40517025	40517025	8553170	4	24,145,286,559,	0,3689,6344,9418,
#Deleted in new
chr17	40525560	40527002	chr17:40525560-40527002	0	+	40525560	40525560	8553170	2	184,559,	0,883,
#Partially deleted in new
chr17	40553768	40565472	chr17:40553768-40565472	3	-	40554741	40565409	789624	3	2050,50,73,	0,5124,11631,
#Partially deleted in new
chr17	40554329	40561013	chr17:40554329-40561013	1	-	40554741	40558934	789624	3	1489,50,335,	0,4563,6349,
#Partially deleted in new
chr17	40555091	40565459	chr17:40555091-40565459	0	-	40555091	40555689	789624	2	727,60,	0,10308,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	40597112	40598585	chr17:40597112-40598585	3	-	40597112	40597112	8553170	1	1473,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	40624961	40648864	chr17:40624961-40648864	3	-	40628784	40645802	789624	11	4032,211,102,173,172,132,81,105,44,52,1092,	0,5752,6630,7233,10969,11433,12530,17493,20614,20834,22811,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	40625002	40648654	chr17:40625002-40648654	1	-	40628784	40637518	789624	9	3991,211,102,173,172,132,81,52,882,	0,5711,6589,7192,10928,11392,12489,20793,22770,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	40627355	40665135	chr17:40627355-40665135	0	-	40664922	40665099	789624	14	1638,211,102,173,172,132,81,44,52,1696,77,221,129,214,	0,3358,4236,4839,8575,9039,10136,18220,18440,20417,30318,32631,34560,37566,
#Partially deleted in new
chr17	40627456	40647832	chr17:40627456-40647832	1	-	40628784	40637518	789624	9	1519,211,102,173,172,132,81,52,60,	0,3257,4135,4738,8474,8938,10035,18339,20316,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	40627466	40647855	chr17:40627466-40647855	0	-	40627466	40627466	8553170	8	3458,4511,132,81,105,44,52,83,	0,4125,8928,10025,14988,18109,18329,20306,
#Partially deleted in new
chr17	40627709	40647848	chr17:40627709-40647848	0	-	40637525	40645802	789624	10	1284,211,102,173,172,132,81,105,52,76,	0,3004,3882,4485,8221,8685,9782,14745,18086,20063,
#Partially deleted in new
chr17	40627718	40648370	chr17:40627718-40648370	1	-	40628784	40645802	789624	10	1275,211,102,173,172,132,81,44,52,598,	0,2995,3873,4476,8212,8676,9773,17857,18077,20054,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	40627721	40647837	chr17:40627721-40647837	1	-	40630221	40645802	789624	12	1272,79,211,102,173,172,132,81,105,44,52,65,	0,2486,2992,3870,4473,8209,8673,9770,14733,17854,18074,20051,
#Partially deleted in new
chr17	40627737	40647832	chr17:40627737-40647832	0	-	40627737	40627737	8553170	8	1256,980,173,172,132,81,52,60,	0,2976,4457,8193,8657,9754,18058,20035,
#Partially deleted in new
chr17	40627742	40647817	chr17:40627742-40647817	1	-	40628999	40645802	789624	10	1271,211,102,173,172,132,81,44,52,45,	0,2971,3849,4452,8188,8652,9749,17833,18053,20030,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	40627742	40647846	chr17:40627742-40647846	0	-	40627742	40627742	8553170	10	1251,79,1654,172,132,81,105,44,52,74,	0,2465,2971,8188,8652,9749,14712,17833,18053,20030,
#Partially deleted in new
chr17	40627743	40632962	chr17:40627743-40632962	0	-	40627743	40627743	8553170	3	1250,211,1371,	0,2970,3848,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	40627743	40647822	chr17:40627743-40647822	0	-	40636080	40637518	789624	10	1250,79,211,102,173,168,132,81,52,50,	0,2464,2970,3848,4451,8187,8651,9748,18052,20029,
#Partially deleted in new
chr17	40627744	40647844	chr17:40627744-40647844	0	-	40640066	40645802	789624	12	1249,211,102,173,172,132,81,98,105,44,52,72,	0,2969,3847,4450,8186,8650,9747,12236,14710,17831,18051,20028,
#Partially deleted in new
chr17	40627758	40647851	chr17:40627758-40647851	0	-	40627758	40627758	8553170	7	1235,1654,172,132,81,52,79,	0,2955,8172,8636,9733,18037,20014,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	40627760	40648137	chr17:40627760-40648137	1	-	40630221	40637518	789624	10	1233,79,211,102,173,172,132,81,52,365,	0,2447,2953,3831,4434,8170,8634,9731,18035,20012,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	40627760	40647852	chr17:40627760-40647852	1	-	40629551	40637518	789624	9	1808,211,102,173,172,132,81,52,80,	0,2953,3831,4434,8170,8634,9731,18035,20012,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	40627761	40647842	chr17:40627761-40647842	1	-	40630221	40645802	789624	11	1232,79,211,102,173,172,132,81,44,52,70,	0,2446,2952,3830,4433,8169,8633,9730,17814,18034,20011,
#Partially deleted in new
chr17	40627761	40642366	chr17:40627761-40642366	0	-	40627761	40627761	8553170	8	1232,211,102,173,172,132,81,202,	0,2952,3830,4433,8169,8633,9730,14403,
#Partially deleted in new
chr17	40627762	40647824	chr17:40627762-40647824	0	-	40627762	40627762	8553170	10	1231,211,776,172,132,81,105,44,52,52,	0,2951,3829,8168,8632,9729,14692,17813,18033,20010,
#Partially deleted in new
chr17	40627762	40647641	chr17:40627762-40647641	1	-	40628784	40645802	789624	11	1231,211,102,173,172,132,81,105,44,52,189,	0,2951,3829,4432,8168,8632,9729,14692,17813,18033,19690,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	40627762	40633628	chr17:40627762-40633628	0	-	40627762	40627762	8553170	2	1231,2915,	0,2951,
#Partially deleted in new
chr17	40627772	40647839	chr17:40627772-40647839	1	-	40628784	40637518	789624	9	1221,211,120,173,172,132,81,52,67,	0,2941,3819,4422,8158,8622,9719,18023,20000,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	40627780	40647830	chr17:40627780-40647830	1	-	40630221	40645802	789624	12	1788,79,211,102,173,172,132,81,105,44,52,58,	0,2427,2933,3811,4414,8150,8614,9711,14674,17795,18015,19992,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	40627817	40633201	chr17:40627817-40633201	0	-	40627817	40627817	8553170	4	1176,211,102,1007,	0,2896,3774,4377,
#Partially deleted in new
chr17	40627839	40647839	chr17:40627839-40647839	0	-	40631676	40637518	789624	8	1154,211,102,172,132,81,52,67,	0,2874,3752,8091,8555,9652,17956,19933,
#Partially deleted in new
chr17	40628108	40647828	chr17:40628108-40647828	0	-	40628108	40628108	8553170	9	885,980,173,172,132,81,44,52,56,	0,2605,4086,7822,8286,9383,17467,17687,19664,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	40628148	40647846	chr17:40628148-40647846	0	-	40637525	40645802	789624	11	845,79,211,102,173,172,132,81,105,52,74,	0,2059,2565,3443,4046,7782,8246,9343,14306,17647,19624,
#Partially deleted in new
chr17	40628467	40647839	chr17:40628467-40647839	1	-	40628784	40642556	789624	9	526,211,102,173,172,132,81,105,67,	0,2246,3124,3727,7463,7927,9024,13987,19305,
#Partially deleted in new
chr17	40628775	40647833	chr17:40628775-40647833	0	-	40628775	40628775	8553170	9	218,1654,172,132,81,105,44,52,61,	0,1938,7155,7619,8716,13679,16800,17020,18997,
#Partially deleted in new
chr17	40628784	40648396	chr17:40628784-40648396	1	-	40628784	40637518	789624	8	209,211,102,173,172,132,81,624,	0,1929,2807,3410,7146,7610,8707,18988,
#Partially deleted in new
chr17	40628796	40665141	chr17:40628796-40665141	3	-	40656401	40665099	8553170	13	197,211,102,173,172,119,518,309,136,77,221,129,138,	0,1917,2795,3398,7134,7598,19774,27525,28555,28877,31190,33119,36207,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	40629334	40647846	chr17:40629334-40647846	1	-	40630636	40637518	789624	8	1590,102,173,172,132,81,52,74,	0,2257,2860,6596,7060,8157,16461,18438,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	40629455	40647842	chr17:40629455-40647842	1	-	40630221	40645802	789624	11	831,211,102,173,172,132,81,105,44,52,70,	0,1258,2136,2739,6475,6939,8036,12999,16120,16340,18317,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	40629463	40631761	chr17:40629463-40631761	0	-	40629463	40629463	8553170	2	1461,170,	0,2128,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	40629622	40647832	chr17:40629622-40647832	1	-	40630636	40645802	789624	9	1302,102,173,172,132,81,44,52,60,	0,1969,2572,6308,6772,7869,15953,16173,18150,
#Partially deleted in new
chr17	40630454	40645836	chr17:40630454-40645836	1	-	40630636	40645802	789624	9	470,102,173,172,132,81,105,44,41,	0,1137,1740,5476,5940,7037,12000,15121,15341,
#Partially deleted in new
chr17	40630830	40647828	chr17:40630830-40647828	0	-	40630830	40644387	789624	11	94,102,173,172,132,81,105,75,44,52,56,	0,761,1364,5100,5564,6661,11624,13554,14745,14965,16942,
#Partially deleted in new
chr17	40630908	40647835	chr17:40630908-40647835	0	-	40630908	40642556	789624	9	16,102,173,172,132,81,105,44,63,	0,683,1286,5022,5486,6583,11546,14667,16864,
#Partially deleted in new
chr17	40631813	40647814	chr17:40631813-40647814	0	-	40631813	40631813	8553170	7	573,172,132,81,44,52,42,	0,4117,4581,5678,13762,13982,15959,
#Partially deleted in new
chr17	40632222	40642512	chr17:40632222-40642512	0	-	40636080	40642512	789624	5	145,168,132,81,58,	0,3708,4172,5269,10232,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	40634162	40647842	chr17:40634162-40647842	0	-	40634162	40634162	8553170	6	1940,132,81,44,52,70,	0,2232,3329,11413,11633,13610,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	40634162	40647838	chr17:40634162-40647838	0	-	40634162	40634162	8553170	5	1940,132,81,52,66,	0,2232,3329,11633,13610,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	40634163	40647840	chr17:40634163-40647840	0	-	40634163	40634163	8553170	6	1939,132,81,105,52,68,	0,2231,3328,8291,11632,13609,
#Deleted in new
chr17	40635741	40637731	chr17:40635741-40637731	0	-	40635741	40635741	8553170	3	361,132,240,	0,653,1750,
#Partially deleted in new
chr17	40635932	40647833	chr17:40635932-40647833	0	-	40635932	40637518	789624	5	170,132,81,44,61,	0,462,1559,9643,11840,
#Deleted in new
chr17	40636063	40636831	chr17:40636063-40636831	0	-	40636063	40636063	8553170	2	39,437,	0,331,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	40636065	40647347	chr17:40636065-40647347	0	-	40636065	40645802	789624	7	37,132,81,105,44,52,108,	0,329,1426,6389,9510,9730,11174,
#Partially deleted in new
chr17	40636177	40647827	chr17:40636177-40647827	0	-	40636177	40636177	8553170	5	349,81,44,52,55,	0,1314,9398,9618,11595,
#Partially deleted in new
chr17	40636408	40647824	chr17:40636408-40647824	0	-	40642376	40645802	789624	6	118,81,442,44,52,52,	0,1083,5709,9167,9387,11364,
#Partially deleted in new
chr17	40637095	40647828	chr17:40637095-40647828	0	-	40637095	40637095	8553170	5	477,105,44,52,56,	0,5359,8480,8700,10677,
#Partially deleted in new
chr17	40640573	40647846	chr17:40640573-40647846	1	-	40642376	40645802	789624	4	1986,44,52,74,	0,5002,5222,7199,
#Partially deleted in new
chr17	40642895	40647824	chr17:40642895-40647824	1	-	40645470	40645802	789624	3	2724,52,52,	0,2900,4877,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	40648299	40649718	chr17:40648299-40649718	3	+	40648299	40648299	8553170	1	1419,	0,
#Partially deleted in new
chr17	40654664	40665156	chr17:40654664-40665156	0	-	40664922	40665099	789624	6	1966,136,77,221,129,235,	0,2687,3009,5322,7251,10257,
#Partially deleted in new
chr17	40655619	40665141	chr17:40655619-40665141	3	-	40656401	40665099	789624	6	1011,136,77,221,129,138,	0,1732,2054,4367,6296,9384,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	40657208	40665145	chr17:40657208-40665145	0	-	40664922	40665099	789624	4	542,221,129,224,	0,2778,4707,7713,
#Partially deleted in new
chr17	40660157	40665181	chr17:40660157-40665181	0	-	40664922	40665099	789624	3	50,180,260,	0,1758,4764,
#Partially deleted in new
chr17	40687037	40689360	chr17:40687037-40689360	7	-	40687037	40687037	16724991	5	82,133,148,79,214,	0,198,513,1611,2109,
#Partially deleted in new
chr17	40697990	40703750	chr17:40697990-40703750	3	-	40698236	40703693	789624	8	350,113,218,126,162,157,83,672,	0,547,1453,2007,2231,3149,3860,5088,
#Partially deleted in new
chr17	40717234	40719140	chr17:40717234-40719140	5	-	40717234	40717234	16724991	3	315,98,106,	0,470,1800,
#Partially deleted in new
chr17	40719033	40721932	chr17:40719033-40721932	7	-	40719033	40719033	16724991	6	219,126,164,158,83,542,	0,617,864,1138,1961,2357,
#Partially deleted in new
chr17	40748020	40755332	chr17:40748020-40755332	3	-	40748276	40755271	789624	8	366,68,218,126,162,157,83,490,	0,1237,2359,2933,3144,5839,6365,6822,
#Partially deleted in new
chr17	40766237	40772162	chr17:40766237-40772162	3	-	40766514	40772113	789624	8	429,68,218,126,162,157,83,490,	0,1348,2641,3516,3723,4015,4916,5435,
#Partially deleted in new
chr17	40776807	40782534	chr17:40776807-40782534	3	-	40776998	40782493	789624	8	331,50,218,126,162,157,83,485,	0,445,707,2694,2892,3492,4380,5242,
#Deleted in new
chr17	40776807	40778020	chr17:40776807-40778020	0	-	40776807	40776807	8553170	4	331,50,218,171,	0,445,707,1042,
#Partially deleted in new
chr17	40792202	40799959	chr17:40792202-40799959	3	-	40792426	40799893	789624	8	367,56,218,126,162,157,83,516,	0,952,1626,4713,4917,6032,6714,7241,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	40803743	40809296	chr17:40803743-40809296	3	+	40803743	40803743	8553170	3	57,60,148,	0,1051,5405,
#Deleted in new
chr17	40818116	40822595	chr17:40818116-40822595	3	-	40818475	40822585	0	8	366,375,218,126,162,157,83,637,	0,670,1400,1932,2145,2394,2918,3842,
#Deleted in new
chr17	40818116	40818983	chr17:40818116-40818983	0	-	40818375	40818983	789624	2	366,217,	0,650,
#Partially deleted in new
chr17	40819105	40835085	chr17:40819105-40835085	0	+	40819105	40819105	8553170	3	65,85,704,	0,14009,15276,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	40819124	40836270	chr17:40819124-40836270	0	+	40819124	40819124	8553170	3	84,85,1889,	0,13990,15257,
#Partially deleted in new
chr17	40819159	40828266	chr17:40819159-40828266	0	+	40819159	40819159	8553170	2	49,210,	0,8897,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	40819184	40836274	chr17:40819184-40836274	3	+	40834516	40835293	789624	3	95,85,1893,	0,13930,15197,
#Partially deleted in new
chr17	40850799	40863282	chr17:40850799-40863282	3	+	40850799	40850799	8553170	2	61,197,	0,12286,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	40860942	40867224	chr17:40860942-40867224	3	-	40861660	40867186	8553170	8	816,71,221,126,162,157,83,605,	0,1622,2180,2542,2760,3863,5212,5677,
#Partially deleted in new
chr17	40861302	40867223	chr17:40861302-40867223	1	-	40861660	40867186	789624	8	456,71,221,126,162,157,83,604,	0,1262,1820,2182,2400,3503,4852,5317,
#Deleted in new
chr17	40862629	40863730	chr17:40862629-40863730	0	-	40862629	40862629	8553170	2	6,608,	0,493,
#Partially deleted in new
chr17	40863321	40866524	chr17:40863321-40866524	0	-	40863321	40863321	8553170	6	22,126,162,157,83,38,	0,163,381,1484,2833,3165,
#Partially deleted in new
chr17	40863755	40865328	chr17:40863755-40865328	0	-	40863755	40863755	8553170	2	109,523,	0,1050,
#Partially deleted in new
chr17	40864886	40867200	chr17:40864886-40867200	0	-	40864886	40867186	8553170	4	76,83,248,225,	0,1268,1733,2089,
#Partially deleted in new
chr17	40875940	40885227	chr17:40875940-40885227	3	-	40876360	40885185	789624	8	518,38,221,126,162,157,83,432,	0,1439,2204,3872,4159,4673,6631,8855,
#Partially deleted in new
chr17	40882462	40884910	chr17:40882462-40884910	0	-	40882462	40882462	8553170	2	192,115,	0,2333,
#Partially deleted in new
chr17	40921429	40975926	chr17:40921429-40975926	3	+	40921429	40921429	8553170	4	60,166,159,430,	0,6829,7094,54067,
#Partially deleted in new
chr17	40922695	40937420	chr17:40922695-40937420	3	-	40922988	40936603	789624	9	388,32,221,123,162,157,83,746,75,	0,1776,2658,5542,5750,7244,8677,13512,14650,
#Partially deleted in new
chr17	40922699	40937450	chr17:40922699-40937450	1	-	40922988	40931440	789624	8	384,32,221,123,162,157,83,323,	0,1772,2654,5538,5746,7240,8673,14428,
#Partially deleted in new
chr17	40922699	40937584	chr17:40922699-40937584	0	-	40928561	40931440	789624	7	384,32,221,123,162,83,457,	0,1772,2654,5538,5746,8673,14428,
#Partially deleted in new
chr17	40925160	40936835	chr17:40925160-40936835	0	-	40925160	40925160	8553170	6	414,123,162,157,83,628,	0,3077,3285,4779,6212,11047,
#Partially deleted in new
chr17	40928237	40937545	chr17:40928237-40937545	0	-	40928561	40931440	789624	5	123,162,83,132,200,	0,208,3135,8890,9108,
#Partially deleted in new
chr17	40929675	40936390	chr17:40929675-40936390	0	-	40929912	40936390	789624	3	421,83,183,	0,1697,6532,
#Deleted in new
chr17	40936447	40937486	chr17:40936447-40937486	0	-	40936447	40936603	789624	2	506,359,	0,680,
#Deleted in new
chr17	40936741	40937577	chr17:40936741-40937577	0	-	40936741	40936741	8553170	3	212,132,232,	0,386,604,
#Deleted in new
chr17	40936831	40937634	chr17:40936831-40937634	0	-	40936831	40936831	8553170	3	122,158,289,	0,270,514,
#Partially deleted in new
chr17	40958416	40966892	chr17:40958416-40966892	3	-	40958600	40966856	789624	7	443,221,126,162,157,83,504,	0,1864,3745,3985,5210,6029,7972,
#Partially deleted in new
chr17	40958461	40966886	chr17:40958461-40966886	0	-	40964168	40966856	789624	8	398,221,126,162,157,44,83,498,	0,1819,3700,3940,5165,5667,5984,7927,
#Partially deleted in new
chr17	40958499	40960697	chr17:40958499-40960697	0	-	40958499	40958499	8553170	2	360,417,	0,1781,
#Partially deleted in new
chr17	40977715	40984308	chr17:40977715-40984308	1	-	40978196	40984273	789624	7	581,221,126,162,157,83,482,	0,1088,3069,3274,4591,5330,6111,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	40977715	40987001	chr17:40977715-40987001	0	-	40981300	40984273	789624	9	581,221,126,335,157,83,448,71,80,	0,1088,3069,3274,4591,5330,6111,8588,9206,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	40977881	40987135	chr17:40977881-40987135	3	-	40978196	40984273	789624	9	415,221,126,162,157,83,448,71,89,	0,922,2903,3108,4425,5164,5945,8422,9165,
#Deleted in new
chr17	40993429	40994133	chr17:40993429-40994133	3	-	40993800	40994097	789624	1	704,	0,
#Deleted in new
chr17	40999192	40999894	chr17:40999192-40999894	3	-	40999556	40999853	789624	1	702,	0,
#Deleted in new
chr17	41004480	41004760	chr17:41004480-41004760	7	-	41004480	41004480	16724991	1	280,	0,
#Deleted in new
chr17	41008520	41009114	chr17:41008520-41009114	3	-	41008777	41009074	789624	1	594,	0,
#Deleted in new
chr17	41026025	41027202	chr17:41026025-41027202	3	-	41026630	41027155	789624	1	1177,	0,
#Deleted in new
chr17	41029696	41030104	chr17:41029696-41030104	3	-	41029712	41030078	789624	1	408,	0,
#Deleted in new
chr17	41033883	41034855	chr17:41033883-41034855	3	-	41034317	41034821	789624	1	972,	0,
#Deleted in new
chr17	41040558	41041461	chr17:41040558-41041461	3	-	41040863	41041397	789624	1	903,	0,
#Deleted in new
chr17	41046540	41047316	chr17:41046540-41047316	3	-	41046880	41047267	789624	1	776,	0,
#Deleted in new
chr17	41046790	41047267	chr17:41046790-41047267	1	-	41046790	41047267	789624	2	72,303,	0,174,
#Deleted in new
chr17	41054497	41055230	chr17:41054497-41055230	1	-	41054839	41055211	789624	1	733,	0,
#Deleted in new
chr17	41054749	41055211	chr17:41054749-41055211	3	-	41054749	41055211	789624	2	57,333,	0,129,
#Deleted in new
chr17	41059239	41060114	chr17:41059239-41060114	3	-	41059663	41060050	789624	1	875,	0,
#Deleted in new
chr17	41065115	41065879	chr17:41065115-41065879	3	-	41065458	41065845	789624	1	764,	0,
#Deleted in new
chr17	41071945	41072341	chr17:41071945-41072341	7	+	41071945	41071945	16724991	1	396,	0,
#Deleted in new
chr17	41084149	41085141	chr17:41084149-41085141	3	+	41084206	41084674	789624	1	992,	0,
#Deleted in new
chr17	41084206	41084674	chr17:41084206-41084674	1	+	41084206	41084674	789624	2	360,63,	0,405,
#Deleted in new
chr17	41096980	41098141	chr17:41096980-41098141	1	-	41097526	41098084	789624	1	1161,	0,
#Deleted in new
chr17	41097526	41098084	chr17:41097526-41098084	3	-	41097526	41098084	789624	3	130,125,213,	0,175,345,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	41101501	41102209	chr17:41101501-41102209	3	-	41101501	41102209	789624	1	708,	0,
#Deleted in new
chr17	41105331	41106488	chr17:41105331-41106488	1	+	41105388	41106021	789624	1	1157,	0,
#Deleted in new
chr17	41105388	41106021	chr17:41105388-41106021	3	+	41105388	41106021	789624	3	193,85,280,	0,238,353,
#Deleted in new
chr17	41117180	41118360	chr17:41117180-41118360	3	-	41117727	41118315	789624	1	1180,	0,
#Deleted in new
chr17	41123090	41124167	chr17:41123090-41124167	3	-	41123516	41124122	789624	1	1077,	0,
#Deleted in new
chr17	41139432	41140487	chr17:41139432-41140487	3	-	41139869	41140487	789624	1	1055,	0,
#Deleted in new
chr17	41148923	41149802	chr17:41148923-41149802	3	-	41149221	41149767	789624	1	879,	0,
#Deleted in new
chr17	41159650	41160731	chr17:41159650-41160731	3	-	41160190	41160691	789624	1	1081,	0,
#Deleted in new
chr17	41167230	41168194	chr17:41167230-41168194	3	-	41167584	41168172	789624	1	964,	0,
#Deleted in new
chr17	41177445	41178208	chr17:41177445-41178208	3	-	41177753	41178164	789624	1	763,	0,
#Deleted in new
chr17	41184101	41185342	chr17:41184101-41185342	3	-	41184413	41184854	789624	1	1241,	0,
#Deleted in new
chr17	41184101	41184895	chr17:41184101-41184895	1	-	41184413	41184854	789624	2	451,286,	0,508,
#Deleted in new
chr17	41186943	41187136	chr17:41186943-41187136	7	-	41186943	41186943	16724991	1	193,	0,
#Deleted in new
chr17	41189886	41190639	chr17:41189886-41190639	3	+	41189886	41190639	789624	1	753,	0,
#Deleted in new
chr17	41189907	41190360	chr17:41189907-41190360	1	+	41189907	41190360	789624	3	39,245,85,	0,96,368,
#Deleted in new
chr17	41189910	41190603	chr17:41189910-41190603	1	+	41189910	41190603	789624	3	60,158,112,	0,93,581,
#Deleted in new
chr17	41190036	41190639	chr17:41190036-41190639	1	+	41190036	41190639	789624	3	140,94,117,	0,239,486,
#Deleted in new
chr17	41212705	41213237	chr17:41212705-41213237	7	+	41212705	41212705	16724991	1	532,	0,
#Deleted in new
chr17	41226647	41227652	chr17:41226647-41227652	3	+	41226654	41227179	789624	1	1005,	0,
#Deleted in new
chr17	41232462	41233454	chr17:41232462-41233454	3	+	41232501	41232981	789624	1	992,	0,
#Deleted in new
chr17	41238044	41239004	chr17:41238044-41239004	3	+	41238051	41238531	789624	1	960,	0,
#Deleted in new
chr17	41249686	41250653	chr17:41249686-41250653	3	+	41249720	41250185	789624	1	967,	0,
#Deleted in new
chr17	41255383	41256364	chr17:41255383-41256364	3	+	41255385	41255895	789624	1	981,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	41265338	41266641	chr17:41265338-41266641	3	+	41265377	41265860	789624	1	1303,	0,
#Deleted in new
chr17	41271310	41271835	chr17:41271310-41271835	7	+	41271310	41271310	16724991	1	525,	0,
#Deleted in new
chr17	41275658	41276697	chr17:41275658-41276697	3	+	41275697	41276207	789624	1	1039,	0,
#Deleted in new
chr17	41280603	41280810	chr17:41280603-41280810	7	+	41280603	41280603	16724991	1	207,	0,
#Deleted in new
chr17	41301825	41302851	chr17:41301825-41302851	3	-	41301825	41302851	789624	1	1026,	0,
#Deleted in new
chr17	41307699	41309253	chr17:41307699-41309253	3	-	41307699	41309253	789624	1	1554,	0,
#Deleted in new
chr17	41314916	41315695	chr17:41314916-41315695	3	-	41315332	41315650	789624	1	779,	0,
#Deleted in new
chr17	41323426	41329545	chr17:41323426-41329545	7	+	41323426	41323426	16724991	8	82,21,93,69,95,152,345,57,	0,1982,2270,2757,3203,3680,4822,6062,
#Deleted in new
chr17	41334631	41335733	chr17:41334631-41335733	7	+	41334631	41334631	16724991	2	176,245,	0,857,
#Partially deleted in new
chr17	41346091	41350812	chr17:41346091-41350812	3	-	41346118	41350767	789624	7	145,221,126,162,157,83,393,	0,356,752,969,2391,3254,4328,
#Partially deleted in new
chr17	41363493	41369800	chr17:41363493-41369800	3	-	41363835	41369750	789624	7	460,221,126,162,157,83,398,	0,1285,1681,1898,2976,4414,5909,
#Partially deleted in new
chr17	41377649	41382403	chr17:41377649-41382403	3	-	41378058	41382372	789624	7	497,221,126,162,157,83,505,	0,1306,1703,1920,3406,4063,4249,
#Deleted in new
chr17	41393723	41397592	chr17:41393723-41397592	3	-	41394015	41397539	789624	7	446,221,126,162,157,83,401,	0,1124,1521,1738,2696,3189,3468,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	41402415	41412588	chr17:41402415-41412588	0	+	41402415	41402415	789624	3	93,1897,170,	0,6005,10003,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	41402422	41425049	chr17:41402422-41425049	3	+	41402422	41402422	8553170	4	86,1897,211,1696,	0,5998,8851,20931,
#Partially deleted in new
chr17	41406511	41411775	chr17:41406511-41411775	7	-	41406511	41406511	16724991	7	115,221,126,162,157,83,429,	0,883,1457,1658,2121,3344,4835,
#Partially deleted in new
chr17	41420752	41424523	chr17:41420752-41424523	3	-	41420877	41424523	789624	7	234,221,126,162,157,83,492,	0,614,1316,1520,2025,3009,3279,
#Deleted in new
chr17	41436445	41440921	chr17:41436445-41440921	3	-	41437411	41440921	789624	7	1096,221,126,162,157,83,492,	0,1647,2045,2251,2757,3715,3984,
#Partially deleted in new
chr17	41448182	41454055	chr17:41448182-41454055	7	-	41448182	41448182	16724991	7	30,201,53,131,147,56,292,	0,282,866,1076,2596,3869,5581,
#Partially deleted in new
chr17	41459810	41467429	chr17:41459810-41467429	3	-	41460109	41467325	789624	7	429,221,126,162,157,83,572,	0,3019,4267,4471,5962,6283,7047,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	41467955	41468146	chr17:41467955-41468146	3	+	41467955	41467955	8553170	1	191,	0,
#Deleted in new
chr17	41476688	41481140	chr17:41476688-41481140	1	-	41477055	41481007	789624	7	515,221,126,162,157,83,514,	0,829,1672,2145,2658,3010,3938,
#Deleted in new
chr17	41476689	41481140	chr17:41476689-41481140	3	-	41477055	41481097	789624	8	253,154,221,126,162,157,83,514,	0,360,828,1671,2144,2657,3009,3937,
#Partially deleted in new
chr17	41486135	41489864	chr17:41486135-41489864	3	-	41486375	41489864	789624	7	436,221,126,162,157,83,459,	0,814,1215,1440,2107,2506,3270,
#Partially deleted in new
chr17	41486135	41492546	chr17:41486135-41492546	1	-	41486375	41492333	789624	8	436,221,126,162,157,83,301,221,	0,814,1215,1440,2107,2506,3270,6190,
#Partially deleted in new
chr17	41500980	41505597	chr17:41500980-41505597	3	-	41501255	41505550	789624	8	382,26,221,126,162,157,83,542,	0,738,1393,1706,1956,2306,2662,4075,
#Partially deleted in new
chr17	41500980	41505597	chr17:41500980-41505597	1	-	41501343	41505550	789624	7	382,221,126,162,157,83,542,	0,1393,1706,1956,2306,2662,4075,
#Deleted in new
chr17	41500981	41501911	chr17:41500981-41501911	0	-	41500981	41500981	8553170	2	381,110,	0,820,
#Deleted in new
chr17	41500982	41502409	chr17:41500982-41502409	3	+	41500982	41500982	8553170	2	334,142,	0,1285,
#Partially deleted in new
chr17	41500989	41505597	chr17:41500989-41505597	0	-	41500989	41500989	8553170	8	755,221,126,162,157,83,180,151,	0,1384,1697,1947,2297,2653,4066,4457,
#Partially deleted in new
chr17	41502224	41505613	chr17:41502224-41505613	1	-	41502369	41505550	789624	6	370,126,162,157,83,558,	0,462,712,1062,1418,2831,
#Partially deleted in new
chr17	41502249	41505612	chr17:41502249-41505612	0	-	41505147	41505550	789624	7	345,126,162,157,83,180,166,	0,437,687,1037,1393,2806,3197,
#Partially deleted in new
chr17	41503017	41505705	chr17:41503017-41505705	0	-	41503017	41505229	789624	5	81,157,83,180,71,	0,269,625,2038,2617,
#Partially deleted in new
chr17	41503068	41505613	chr17:41503068-41505613	0	-	41503068	41505550	789624	3	30,57,462,	0,218,2083,
#Partially deleted in new
chr17	41503658	41504576	chr17:41503658-41504576	0	-	41503658	41503658	8553170	2	67,512,	0,406,
#Partially deleted in new
chr17	41513742	41522413	chr17:41513742-41522413	3	-	41514022	41518827	789624	8	378,26,221,126,162,157,83,4084,	0,906,1729,2142,2361,3065,3340,4587,
#Partially deleted in new
chr17	41513744	41521019	chr17:41513744-41521019	1	-	41514022	41518415	789624	7	376,26,221,126,162,157,2690,	0,904,1727,2140,2359,3063,4585,
#Partially deleted in new
chr17	41513745	41521719	chr17:41513745-41521719	1	-	41514022	41518827	789624	10	375,26,221,126,162,157,83,681,528,35,	0,903,1726,2139,2358,3062,3337,4584,5599,7939,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	41513745	41521774	chr17:41513745-41521774	0	-	41513745	41513745	8553170	6	1947,126,162,157,132,90,	0,2139,2358,3062,4584,7939,
#Deleted in new
chr17	41513756	41514754	chr17:41513756-41514754	0	-	41513756	41513756	8553170	2	364,106,	0,892,
#Partially deleted in new
chr17	41515561	41522529	chr17:41515561-41522529	0	-	41515561	41518415	789624	6	131,126,162,157,132,195,	0,323,542,1246,2768,6773,
#Partially deleted in new
chr17	41515884	41521783	chr17:41515884-41521783	0	-	41515884	41515884	8553170	5	126,162,358,132,99,	0,219,923,2445,5800,
#Partially deleted in new
chr17	41516103	41521901	chr17:41516103-41521901	0	-	41516887	41518415	789624	6	162,157,83,132,208,217,	0,704,979,2226,3561,5581,
#Partially deleted in new
chr17	41516807	41521819	chr17:41516807-41521819	0	-	41517545	41518415	789624	5	157,83,273,132,135,	0,275,529,1522,4877,
#Deleted in new
chr17	41517163	41517217	chr17:41517163-41517217	3	-	41517163	41517163	5263520	1	54,	0,
#Partially deleted in new
chr17	41523616	41528308	chr17:41523616-41528308	3	-	41523742	41528247	789624	6	381,126,162,157,83,481,	0,526,762,1226,1574,4211,
#Deleted in new
chr17	41523713	41524993	chr17:41523713-41524993	0	-	41523713	41523713	8553170	3	555,162,151,	0,665,1129,
#Deleted in new
chr17	41523874	41525445	chr17:41523874-41525445	0	-	41523874	41524974	789624	6	123,126,162,157,83,77,	0,268,504,968,1316,1494,
#Deleted in new
chr17	41523987	41524751	chr17:41523987-41524751	0	-	41523987	41523987	8553170	2	281,373,	0,391,
#Deleted in new
chr17	41524492	41525221	chr17:41524492-41525221	0	-	41524492	41524492	8553170	2	48,379,	0,350,
#Partially deleted in new
chr17	41524518	41528299	chr17:41524518-41528299	0	-	41524518	41528247	789624	4	22,157,83,379,	0,324,672,3402,
#Deleted in new
chr17	41524977	41525672	chr17:41524977-41525672	0	-	41524977	41524977	8553170	2	22,482,	0,213,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	41549605	41554495	chr17:41549605-41554495	3	-	41549605	41549605	789624	3	1260,665,216,	0,2267,4674,
#Deleted in new
chr17	41565840	41572058	chr17:41565840-41572058	3	-	41567272	41571992	789624	8	312,518,224,126,162,157,83,708,	0,1392,2321,2667,3585,4018,4297,5510,
#Deleted in new
chr17	41566103	41572053	chr17:41566103-41572053	1	-	41567272	41570163	789624	9	49,518,224,126,162,157,83,132,42,	0,1129,2058,2404,3322,3755,4034,5247,5908,
#Partially deleted in new
chr17	41582278	41586921	chr17:41582278-41586921	3	-	41582434	41586834	0	8	254,47,221,126,162,157,83,612,	0,815,956,1272,1481,1978,2696,4031,
#Deleted in new
chr17	41582308	41583455	chr17:41582308-41583455	0	-	41582308	41582308	8553170	2	832,221,	0,926,
#Partially deleted in new
chr17	41583248	41584471	chr17:41583248-41584471	0	-	41583248	41583248	8553170	4	207,126,162,215,	0,302,511,1008,
#Deleted in new
chr17	41609777	41612753	chr17:41609777-41612753	3	-	41609934	41612688	789624	8	252,47,221,126,162,157,83,596,	0,412,553,1076,1291,1567,1861,2380,
#Deleted in new
chr17	41610408	41612899	chr17:41610408-41612899	0	-	41610408	41611401	789624	7	143,126,162,157,83,129,110,	0,445,660,936,1230,1749,2381,
#Deleted in new
chr17	41611765	41612765	chr17:41611765-41612765	0	-	41611765	41611765	8553170	1	1000,	0,
#Deleted in new
chr17	41612542	41615899	chr17:41612542-41615899	0	-	41612542	41612688	789624	2	182,317,	0,3040,
#Deleted in new
chr17	41619440	41624708	chr17:41619440-41624708	3	-	41619593	41624509	8553170	8	248,23,221,126,162,157,83,631,	0,1095,1218,1525,2152,2914,3509,4637,
#Deleted in new
chr17	41619441	41624575	chr17:41619441-41624575	1	-	41619593	41624509	789624	8	247,23,221,126,162,157,83,498,	0,1094,1217,1524,2151,2913,3508,4636,
#Deleted in new
chr17	41619442	41624541	chr17:41619442-41624541	1	-	41619593	41624304	789624	10	246,23,221,126,162,157,83,111,1,308,	0,1093,1216,1523,2150,2912,3507,4635,4748,4791,
#Deleted in new
chr17	41619445	41624296	chr17:41619445-41624296	0	-	41619445	41619445	8553170	7	243,23,221,126,919,83,219,	0,1090,1213,1520,2147,3504,4632,
#Deleted in new
chr17	41619484	41621201	chr17:41619484-41621201	0	-	41619484	41619484	8553170	4	204,23,221,236,	0,1051,1174,1481,
#Deleted in new
chr17	41620179	41620829	chr17:41620179-41620829	0	-	41620434	41620829	8553170	2	379,171,	0,479,
#Deleted in new
chr17	41621025	41624842	chr17:41621025-41624842	0	-	41621025	41622411	789624	6	66,162,157,83,129,100,	0,567,1329,1924,3052,3717,
#Deleted in new
chr17	41621626	41624464	chr17:41621626-41624464	0	-	41621626	41624464	789624	4	128,97,83,387,	0,728,1323,2451,
#Deleted in new
chr17	41621661	41623268	chr17:41621661-41623268	0	-	41621661	41621661	8553170	3	90,157,319,	0,693,1288,
#Deleted in new
chr17	41622872	41624575	chr17:41622872-41624575	0	-	41622872	41622872	8553170	2	160,498,	0,1205,
#Partially deleted in new
chr17	41626535	41634106	chr17:41626535-41634106	5	-	41626535	41626535	16724991	6	93,220,115,162,212,291,	0,1351,1819,2540,3883,7280,
#Deleted in new
chr17	41627949	41628766	chr17:41627949-41628766	4	-	41627949	41627949	16724991	2	157,412,	0,405,
#Deleted in new
chr17	41665565	41668031	chr17:41665565-41668031	3	+	41665565	41665565	8553170	1	2466,	0,
#Deleted in new
chr17	41688884	41691646	chr17:41688884-41691646	0	+	41688884	41688884	8553170	2	1305,865,	0,1897,
#Deleted in new
chr17	41688886	41691212	chr17:41688886-41691212	1	+	41689038	41690933	789624	5	183,164,102,38,310,	0,891,1201,1895,2016,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	41688892	41692668	chr17:41688892-41692668	3	+	41689038	41690826	0	4	177,164,102,1887,	0,885,1195,1889,
#Deleted in new
chr17	41688894	41691622	chr17:41688894-41691622	0	+	41688894	41688894	8553170	3	175,412,841,	0,883,1887,
#Deleted in new
chr17	41688900	41691630	chr17:41688900-41691630	0	+	41688900	41688900	8553170	3	169,102,849,	0,1187,1881,
#Deleted in new
chr17	41688934	41690999	chr17:41688934-41690999	0	+	41688934	41688934	8553170	4	331,164,102,218,	0,843,1153,1847,
#Deleted in new
chr17	41689902	41690620	chr17:41689902-41690620	0	+	41689902	41690210	789624	2	39,533,	0,185,
#Partially deleted in new
chr17	41712325	41715969	chr17:41712325-41715969	3	+	41715436	41715872	0	3	62,216,192,	0,3106,3452,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	41717741	41725141	chr17:41717741-41725141	0	-	41718006	41725141	789624	3	285,64,138,	0,7024,7262,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	41717741	41725897	chr17:41717741-41725897	0	-	41717944	41725897	789624	2	285,39,	0,8117,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	41717741	41725081	chr17:41717741-41725081	0	-	41718006	41725081	789624	2	285,316,	0,7024,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	41718153	41718260	chr17:41718153-41718260	7	+	41718153	41718153	16724991	1	107,	0,
#Duplicated in new
chr17	41720812	41734644	chr17:41720812-41734644	1	-	41724700	41734634	789624	10	4342,39,92,131,67,106,182,165,80,479,	0,5046,6240,7388,10680,10825,11124,11417,11906,13353,
#Partially deleted in new
chr17	41722639	41734644	chr17:41722639-41734644	1	-	41724700	41734634	789624	12	2515,39,92,156,75,131,67,106,182,165,80,479,	0,3219,4413,4658,5122,5561,8853,8998,9297,9590,10079,11526,
#Partially deleted in new
chr17	41722639	41734644	chr17:41722639-41734644	1	-	41724700	41734634	789624	10	2515,39,92,131,67,106,182,165,104,479,	0,3219,4413,5561,8853,8998,9297,9590,10055,11526,
#Partially deleted in new
chr17	41722639	41734644	chr17:41722639-41734644	3	-	41724700	41734634	789624	11	2515,39,92,75,131,67,106,182,165,80,479,	0,3219,4413,5122,5561,8853,8998,9297,9590,10079,11526,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	41730126	41730405	chr17:41730126-41730405	3	-	41730126	41730126	8553170	1	279,	0,
#Partially deleted in new
chr17	41754603	41786698	chr17:41754603-41786698	1	-	41755743	41771854	0	15	829,166,40,122,151,120,156,339,104,145,202,239,260,216,111,	0,1126,1571,2811,3030,3795,4111,8379,10109,10319,12775,14365,14814,17043,31984,
#Partially deleted in new
chr17	41754603	41785155	chr17:41754603-41785155	1	-	41755743	41771854	0	15	829,166,40,122,151,120,156,339,104,145,202,239,260,216,209,	0,1126,1571,2811,3030,3795,4111,8379,10109,10319,12775,14365,14814,17043,30343,
#Partially deleted in new
chr17	41754603	41786698	chr17:41754603-41786698	3	-	41755743	41771854	0	14	1292,40,122,151,120,156,339,104,145,202,239,260,216,111,	0,1571,2811,3030,3795,4111,8379,10109,10319,12775,14365,14814,17043,31984,
#Partially deleted in new
chr17	41758171	41763077	chr17:41758171-41763077	0	-	41758171	41758171	8553170	3	347,156,95,	0,543,4811,
#Partially deleted in new
chr17	41767394	41786070	chr17:41767394-41786070	0	-	41767394	41771854	789624	5	186,239,260,216,168,	0,1574,2023,4252,18508,
#Partially deleted in new
chr17	41767400	41786931	chr17:41767400-41786931	0	-	41767400	41771854	789624	5	180,239,260,216,134,	0,1568,2017,4246,19397,
#Partially deleted in new
chr17	41767457	41772269	chr17:41767457-41772269	0	-	41767457	41771854	789624	5	123,239,260,216,77,	0,1511,1960,4189,4735,
#Partially deleted in new
chr17	41768968	41786712	chr17:41768968-41786712	0	-	41768968	41771854	789624	5	239,260,216,109,125,	0,449,2678,3849,17619,
#Partially deleted in new
chr17	41769573	41786765	chr17:41769573-41786765	0	-	41769573	41771854	789624	3	104,216,263,	0,2073,16929,
#Partially deleted in new
chr17	41769625	41785155	chr17:41769625-41785155	0	-	41769625	41771854	789624	4	52,216,109,209,	0,2021,3192,15321,
#Partially deleted in new
chr17	41771416	41786710	chr17:41771416-41786710	0	-	41771416	41771416	8553170	2	443,123,	0,15171,
#Partially deleted in new
chr17	41771846	41786209	chr17:41771846-41786209	0	-	41771846	41771854	8553170	3	16,109,307,	0,971,14056,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	41801946	41812603	chr17:41801946-41812603	3	-	41802956	41811915	789624	9	1033,145,84,146,129,172,153,689,240,	0,1340,4849,5912,7759,8916,9185,9507,10417,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	41801953	41812199	chr17:41801953-41812199	1	-	41802956	41811915	789624	8	1026,145,84,146,129,172,153,746,	0,1333,4842,5905,7752,8909,9178,9500,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	41801953	41807490	chr17:41801953-41807490	0	-	41801953	41801953	8553170	3	1026,145,695,	0,1333,4842,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	41802319	41806848	chr17:41802319-41806848	0	-	41802956	41806848	789624	4	104,269,145,53,	0,391,967,4476,
#Partially deleted in new
chr17	41806795	41811560	chr17:41806795-41811560	0	-	41806795	41811560	789624	5	84,146,172,153,107,	0,1063,4067,4336,4658,
#Partially deleted in new
chr17	41806824	41811160	chr17:41806824-41811160	0	-	41806824	41806824	8553170	2	55,481,	0,3855,
#Partially deleted in new
chr17	41810680	41811669	chr17:41810680-41811669	0	-	41810680	41810680	8553170	3	354,153,216,	0,451,773,
#Partially deleted in new
chr17	41811660	41812604	chr17:41811660-41812604	0	-	41811660	41811915	789624	2	468,37,	0,907,
#Partially deleted in new
chr17	41812679	41818496	chr17:41812679-41818496	0	+	41813214	41818496	789624	5	60,87,146,190,115,	0,513,4378,5409,5702,
#Partially deleted in new
chr17	41812694	41818210	chr17:41812694-41818210	0	+	41813034	41818210	789624	4	45,250,146,122,	0,335,4363,5394,
#Partially deleted in new
chr17	41812789	41818120	chr17:41812789-41818120	0	+	41813214	41818120	789624	4	133,87,146,32,	0,403,4268,5299,
#Partially deleted in new
chr17	41812930	41823217	chr17:41812930-41823217	3	+	41813034	41822408	789624	10	349,146,190,146,190,146,193,143,164,995,	0,4127,5158,5451,6279,6599,7338,8016,8723,9292,
#Partially deleted in new
chr17	41812988	41823211	chr17:41812988-41823211	0	+	41813034	41818390	789624	9	291,190,146,190,520,193,143,164,989,	0,5100,5393,6221,6541,7280,7958,8665,9234,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	41818869	41819577	chr17:41818869-41819577	0	+	41818869	41818869	8553170	2	530,48,	0,660,
#Partially deleted in new
chr17	41819254	41823213	chr17:41819254-41823213	0	+	41819254	41822408	789624	7	145,146,183,193,143,164,991,	0,275,586,1014,1692,2399,2968,
#Partially deleted in new
chr17	41820002	41822293	chr17:41820002-41822293	0	+	41820002	41820002	8553170	4	459,143,164,71,	0,944,1651,2220,
#Partially deleted in new
chr17	41820442	41822540	chr17:41820442-41822540	0	+	41820442	41820442	8553170	3	647,164,318,	0,1211,1780,
#Partially deleted in new
chr17	41825180	41836202	chr17:41825180-41836202	0	-	41825180	41825180	8553170	9	477,201,163,90,86,47,70,95,344,	0,2245,3609,5620,7211,9889,10022,10407,10678,
#Partially deleted in new
chr17	41825180	41832488	chr17:41825180-41832488	0	-	41825180	41825180	8553170	5	477,201,163,90,97,	0,2245,3609,5620,7211,
#Partially deleted in new
chr17	41825180	41836258	chr17:41825180-41836258	0	-	41825180	41825180	789624	8	477,201,163,90,86,47,70,400,	0,2245,3609,5620,7211,9889,10022,10678,
#Partially deleted in new
chr17	41825199	41836260	chr17:41825199-41836260	1	-	41825522	41836193	789624	7	458,163,90,86,47,70,79,	0,3590,5601,7192,9870,10003,10982,
#Partially deleted in new
chr17	41825226	41836228	chr17:41825226-41836228	0	-	41825226	41825226	8553170	8	431,201,163,90,86,47,70,641,	0,2199,3563,5574,7165,9843,9976,10361,
#Partially deleted in new
chr17	41825237	41836197	chr17:41825237-41836197	0	-	41825237	41825237	8553170	7	420,201,90,86,47,70,339,	0,2188,5563,7154,9832,9965,10621,
#Partially deleted in new
chr17	41825520	41836263	chr17:41825520-41836263	3	-	41825522	41836193	789624	9	137,201,163,90,86,47,70,99,82,	0,1905,3269,5280,6871,9549,9682,10338,10661,
#Partially deleted in new
chr17	41825653	41836241	chr17:41825653-41836241	0	-	41825653	41836193	789624	8	4,201,163,86,47,70,99,60,	0,1772,3136,6738,9416,9549,10205,10528,
#Partially deleted in new
chr17	41827425	41836244	chr17:41827425-41836244	0	-	41835261	41836193	789624	8	201,163,90,86,47,70,99,166,	0,1364,3375,4966,7644,7777,8433,8653,
#Partially deleted in new
chr17	41827425	41836227	chr17:41827425-41836227	0	-	41827425	41827425	8553170	8	201,163,90,86,47,70,55,369,	0,1364,3375,4966,7644,7777,8162,8433,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	41828321	41830880	chr17:41828321-41830880	0	-	41828714	41830880	789624	2	631,80,	0,2479,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	41828804	41832666	chr17:41828804-41832666	0	-	41828804	41828804	8553170	3	148,90,275,	0,1996,3587,
#Partially deleted in new
chr17	41828829	41836246	chr17:41828829-41836246	0	-	41835619	41836193	789624	8	123,90,86,47,70,95,99,65,	0,1971,3562,6240,6373,6758,7029,7352,
#Partially deleted in new
chr17	41828904	41836203	chr17:41828904-41836203	0	-	41828904	41828904	8553170	7	48,90,86,47,70,370,125,	0,1896,3487,6165,6298,6683,7174,
#Deleted in new
chr17	41835081	41835498	chr17:41835081-41835498	0	-	41835081	41835081	8553170	2	35,296,	0,121,
#Partially deleted in new
chr17	41835684	41841994	chr17:41835684-41841994	0	+	41837932	41841994	789624	4	170,99,200,172,	0,1805,2242,6138,
#Partially deleted in new
chr17	41837779	41848384	chr17:41837779-41848384	3	+	41837932	41848307	789624	5	347,490,618,150,452,	0,4043,7346,9481,10153,
#Partially deleted in new
chr17	41837824	41842104	chr17:41837824-41842104	0	+	41837932	41842104	789624	2	240,326,	0,3954,
#Partially deleted in new
chr17	41837824	41842151	chr17:41837824-41842151	0	+	41837824	41837824	8553170	2	240,329,	0,3998,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	41848517	41851447	chr17:41848517-41851447	3	-	41848517	41848517	8553170	1	2930,	0,
#Partially deleted in new
chr17	41853544	41865431	chr17:41853544-41865431	3	-	41853739	41865370	0	2	1777,606,	0,11281,
#Partially deleted in new
chr17	41866907	41918987	chr17:41866907-41918987	3	-	41867809	41913873	0	29	997,77,83,114,144,151,155,94,128,111,82,197,105,169,142,30,91,155,118,62,137,119,131,80,191,63,123,182,108,	0,1801,2135,2566,4781,5124,6903,11195,11889,16214,17285,19204,20691,25371,26125,29712,30841,31723,34788,37821,38614,39620,40534,42081,42602,43314,45512,46807,51972,
#Partially deleted in new
chr17	41866916	41918962	chr17:41866916-41918962	1	-	41867809	41913873	0	29	988,77,83,114,144,151,155,94,128,111,82,197,105,169,142,30,91,155,118,62,137,119,131,80,191,63,123,186,83,	0,1792,2126,2557,4772,5115,6894,11186,11880,16205,17276,19195,20682,25362,26116,29703,30832,31714,34779,37812,38605,39611,40525,42072,42593,43305,45503,46798,51963,
#Partially deleted in new
chr17	41866930	41919019	chr17:41866930-41919019	1	-	41867809	41913873	0	28	974,77,83,114,144,151,155,94,128,111,82,197,105,169,142,91,155,118,62,137,119,131,80,191,63,123,182,140,	0,1778,2112,2543,4758,5101,6880,11172,11866,16191,17262,19181,20668,25348,26102,30818,31700,34765,37798,38591,39597,40511,42058,42579,43291,45489,46784,51949,
#Partially deleted in new
chr17	41867455	41918983	chr17:41867455-41918983	1	-	41867809	41913873	0	21	449,77,83,114,144,151,155,94,128,111,82,197,105,169,142,91,155,118,123,182,104,	0,1253,1587,2018,4233,4576,6355,10647,11341,15666,16737,18656,20143,24823,25577,30293,31175,34240,44964,46259,51424,
#Partially deleted in new
chr17	41867573	41919022	chr17:41867573-41919022	1	-	41867809	41913873	0	28	331,77,83,114,144,151,155,94,128,111,82,197,105,169,142,91,155,118,62,137,119,131,80,191,63,123,186,143,	0,1135,1469,1900,4115,4458,6237,10529,11223,15548,16619,18538,20025,24705,25459,30175,31057,34122,37155,37948,38954,39868,41415,41936,42648,44846,46141,51306,
#Deleted in new
chr17	41867580	41867736	chr17:41867580-41867736	3	+	41867580	41867580	8553170	1	156,	0,
#Partially deleted in new
chr17	41867760	41870719	chr17:41867760-41870719	0	-	41867760	41867760	8553170	5	144,77,83,114,365,	0,948,1282,1713,2594,
#Partially deleted in new
chr17	41897800	41918951	chr17:41897800-41918951	0	-	41897800	41905546	789624	6	39,155,118,62,137,72,	0,830,3895,6928,7721,21079,
#Deleted in new
chr17	41904439	41905641	chr17:41904439-41905641	0	-	41904439	41904439	8553170	2	351,120,	0,1082,
#Partially deleted in new
chr17	41906597	41918951	chr17:41906597-41918951	0	-	41906597	41906597	8553170	6	49,131,80,191,63,72,	0,844,2391,2912,3624,12282,
#Partially deleted in new
chr17	41910238	41930542	chr17:41910238-41930542	0	-	41910238	41913873	789624	4	46,123,186,185,	0,2181,3476,20119,
#Partially deleted in new
chr17	41930634	41938690	chr17:41930634-41938690	0	+	41930723	41935482	789624	6	203,132,73,62,166,134,	0,4582,4836,5838,6127,7922,
#Partially deleted in new
chr17	41930644	41965630	chr17:41930644-41965630	0	+	41930723	41945226	789624	10	193,132,151,62,166,225,208,124,85,638,	0,4572,4954,5828,6117,7912,8320,14491,30737,34348,
#Partially deleted in new
chr17	41930655	41965651	chr17:41930655-41965651	3	+	41930723	41965483	789624	12	182,132,151,62,166,225,208,87,197,101,85,659,	0,4561,4943,5817,6106,7901,8309,14480,18497,24561,30726,34337,
#Partially deleted in new
chr17	41935297	41937041	chr17:41935297-41937041	0	+	41935297	41935482	789624	4	51,73,62,280,	0,173,1175,1464,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	41966740	41977731	chr17:41966740-41977731	3	+	41966884	41973924	0	4	147,673,140,4257,	0,1327,5151,6734,
#Partially deleted in new
chr17	41966762	41974228	chr17:41966762-41974228	1	+	41966884	41973481	789624	3	125,140,754,	0,5129,6712,
#Deleted in new
chr17	41966794	41968175	chr17:41966794-41968175	0	+	41966794	41966794	8553170	2	93,483,	0,898,
#Deleted in new
chr17	41966797	41968669	chr17:41966797-41968669	0	+	41966884	41968669	789624	2	90,491,	0,1381,
#Deleted in new
chr17	41966797	41968503	chr17:41966797-41968503	0	+	41966797	41966797	8553170	3	90,61,436,	0,895,1270,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	41966814	41975176	chr17:41966814-41975176	1	+	41968124	41973924	0	4	73,668,140,1702,	0,1258,5077,6660,
#Deleted in new
chr17	41966881	41968557	chr17:41966881-41968557	0	+	41968124	41968557	789624	2	132,490,	0,1186,
#Deleted in new
chr17	41967332	41968486	chr17:41967332-41968486	0	+	41968124	41968486	789624	2	97,419,	0,735,
#Deleted in new
chr17	41967782	41968585	chr17:41967782-41968585	0	+	41968124	41968585	789624	2	171,518,	0,285,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	41970280	41971797	chr17:41970280-41971797	0	+	41970280	41970280	8553170	1	1517,	0,
#Partially deleted in new
chr17	41971287	41973817	chr17:41971287-41973817	0	+	41971287	41971287	8553170	3	89,140,343,	0,604,2187,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	41971608	41973962	chr17:41971608-41973962	0	+	41971608	41971608	8553170	2	423,488,	0,1866,
#Partially deleted in new
chr17	41976432	42017653	chr17:41976432-42017653	3	-	41976732	42017416	789624	14	338,63,153,147,74,92,165,154,119,75,114,125,89,314,	0,828,5422,5822,7130,11386,12299,12971,13831,18437,19878,20682,24049,40907,
#Partially deleted in new
chr17	41976451	41982321	chr17:41976451-41982321	0	-	41976732	41982321	789624	3	319,63,67,	0,809,5803,
#Partially deleted in new
chr17	41976478	42017151	chr17:41976478-42017151	1	-	41976732	41997237	789624	14	292,63,153,147,74,92,165,154,119,75,114,125,89,112,	0,782,5376,5776,7084,11340,12253,12925,13785,18391,19832,20636,24003,40561,
#Partially deleted in new
chr17	41976540	42017419	chr17:41976540-42017419	0	-	41994974	42017416	789624	14	230,63,153,147,74,92,165,154,119,114,114,125,89,80,	0,720,5314,5714,7022,11278,12191,12863,13723,18329,19770,20574,23941,40799,
#Partially deleted in new
chr17	41976663	42017419	chr17:41976663-42017419	1	-	41976732	41997237	789624	13	107,63,153,147,74,92,165,154,119,75,114,125,80,	0,597,5191,5591,6899,11155,12068,12740,13600,18206,19647,20451,40676,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	41981594	41982403	chr17:41981594-41982403	0	-	41981594	41981594	8553170	2	413,149,	0,660,
#Partially deleted in new
chr17	41981983	41988873	chr17:41981983-41988873	0	-	41987660	41988873	789624	6	24,147,74,100,92,142,	0,271,1579,5611,5835,6748,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	41984305	41986067	chr17:41984305-41986067	0	-	41984305	41984305	8553170	1	1762,	0,
#Deleted in new
chr17	41987436	41988822	chr17:41987436-41988822	0	-	41987436	41987436	8553170	3	258,92,91,	0,382,1295,
#Partially deleted in new
chr17	41987676	42017151	chr17:41987676-42017151	0	-	41987893	41997237	789624	10	18,87,165,154,119,75,114,125,89,112,	0,142,1055,1727,2587,7193,8634,9438,12805,29363,
#Partially deleted in new
chr17	41988760	42017423	chr17:41988760-42017423	0	-	41988760	42017416	789624	7	136,154,119,75,125,89,84,	0,643,1503,6109,8354,11721,28579,
#Partially deleted in new
chr17	41988825	42018522	chr17:41988825-42018522	0	-	41988825	42018475	789624	8	71,154,119,75,114,125,89,85,	0,578,1438,6044,7485,8289,11656,29612,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	41989420	41992782	chr17:41989420-41992782	0	-	41989420	41989420	8553170	3	137,119,175,	0,843,3187,
#Partially deleted in new
chr17	41990310	42017162	chr17:41990310-42017162	0	-	41990310	41997237	789624	6	72,75,114,125,89,111,	0,4559,6000,6804,10171,26741,
#Partially deleted in new
chr17	41990353	42016698	chr17:41990353-42016698	0	-	41990353	41997237	789624	6	29,75,114,125,89,112,	0,4516,5957,6761,10128,26233,
#Partially deleted in new
chr17	41994869	42017423	chr17:41994869-42017423	0	-	42003514	42017416	789624	6	75,114,125,89,199,84,	0,1441,2245,5612,8489,22470,
#Partially deleted in new
chr17	41994869	42017145	chr17:41994869-42017145	0	-	41994869	41997237	789624	6	75,114,125,89,111,106,	0,1441,2245,5612,6086,22170,
#Partially deleted in new
chr17	41994874	42018518	chr17:41994874-42018518	0	-	41994874	41997237	789624	6	70,114,125,89,199,81,	0,1436,2240,5607,8484,23563,
#Partially deleted in new
chr17	41996320	42011275	chr17:41996320-42011275	0	-	41996320	41997237	789624	4	104,125,89,225,	0,794,4161,14730,
#Partially deleted in new
chr17	41996325	42021376	chr17:41996325-42021376	0	-	41996325	41997237	789624	5	99,125,89,199,54,	0,789,4156,7033,24997,
#Partially deleted in new
chr17	42000556	42017002	chr17:42000556-42017002	0	-	42000556	42000556	8553170	3	14,111,416,	0,399,16030,
#Partially deleted in new
chr17	42011381	42022444	chr17:42011381-42022444	0	+	42021577	42022444	789624	3	410,108,46,	0,10182,11017,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	42012981	42014937	chr17:42012981-42014937	0	-	42012981	42012981	8553170	1	1956,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	42014589	42017153	chr17:42014589-42017153	0	-	42014589	42014589	8553170	1	2564,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	42017019	42025644	chr17:42017019-42025644	3	+	42021577	42023893	789624	4	607,108,242,1991,	0,4544,5379,6634,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	42020050	42025058	chr17:42020050-42025058	1	+	42021577	42023893	789624	4	154,108,242,1405,	0,1513,2348,3603,
#Partially deleted in new
chr17	42020071	42023841	chr17:42020071-42023841	0	+	42022406	42023841	789624	3	133,242,188,	0,2327,3582,
#Partially deleted in new
chr17	42020077	42024265	chr17:42020077-42024265	1	+	42021577	42023708	789624	5	127,108,74,71,612,	0,1486,2321,2492,3576,
#Partially deleted in new
chr17	42020077	42024265	chr17:42020077-42024265	0	+	42021577	42022573	789624	5	127,108,74,76,612,	0,1486,2321,2487,3576,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	42020096	42024774	chr17:42020096-42024774	1	+	42021577	42023893	789624	4	173,108,242,1121,	0,1467,2302,3557,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	42020096	42024774	chr17:42020096-42024774	1	+	42021577	42023893	789624	4	108,127,242,1121,	0,1448,2302,3557,
#Partially deleted in new
chr17	42020100	42024026	chr17:42020100-42024026	1	+	42021577	42023685	789624	3	104,108,373,	0,1463,3553,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	42020101	42021995	chr17:42020101-42021995	0	+	42020101	42020101	8553170	2	103,432,	0,1462,
#Partially deleted in new
chr17	42020103	42024220	chr17:42020103-42024220	0	+	42021577	42022410	789624	4	101,108,265,567,	0,1460,2272,3550,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	42020105	42024833	chr17:42020105-42024833	1	+	42021577	42023893	789624	4	99,108,74,1180,	0,1458,2293,3548,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	42020415	42025641	chr17:42020415-42025641	0	+	42020415	42020415	8553170	2	2225,1988,	0,3238,
#Deleted in new
chr17	42025575	42028689	chr17:42025575-42028689	1	-	42026896	42028229	8553170	4	1558,111,197,123,	0,2042,2474,2991,
#Deleted in new
chr17	42025575	42028131	chr17:42025575-42028131	0	-	42025575	42025575	8553170	2	1558,514,	0,2042,
#Partially deleted in new
chr17	42025575	42038026	chr17:42025575-42038026	1	-	42026896	42038026	789624	8	1558,111,197,291,166,111,149,13,	0,2042,2474,3207,6043,8649,12161,12438,
#Partially deleted in new
chr17	42025624	42037818	chr17:42025624-42037818	0	-	42026896	42037818	8553170	7	1509,111,197,291,166,111,82,	0,1993,2425,3158,5994,8600,12112,
#Partially deleted in new
chr17	42026896	42098479	chr17:42026896-42098479	3	-	42026896	42063056	789624	9	237,96,197,294,166,111,149,252,70,	0,736,1153,1886,4722,7328,10840,35910,71513,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	42038231	42050614	chr17:42038231-42050614	3	-	42039704	42043376	789624	3	2958,730,58,	0,4602,12325,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	42061238	42065365	chr17:42061238-42065365	0	-	42061238	42061238	8553170	2	1820,265,	0,3862,
#Partially deleted in new
chr17	42101403	42112733	chr17:42101403-42112733	3	-	42101760	42111892	0	14	543,97,191,162,150,254,192,127,117,191,202,169,93,129,	0,812,2204,3362,3614,4332,6200,6578,7866,9319,9892,10321,10709,11201,
#Partially deleted in new
chr17	42101403	42104907	chr17:42101403-42104907	0	-	42102300	42104907	789624	3	543,97,142,	0,812,3362,
#Deleted in new
chr17	42101599	42102809	chr17:42101599-42102809	0	-	42101599	42101599	8553170	2	347,594,	0,616,
#Partially deleted in new
chr17	42103212	42112713	chr17:42103212-42112713	0	-	42103212	42103212	8553170	12	586,162,150,254,192,127,117,191,202,148,93,109,	0,1553,1805,2523,4391,4769,6057,7510,8083,8533,8900,9392,
#Partially deleted in new
chr17	42103607	42107848	chr17:42103607-42107848	0	-	42103607	42103607	8553170	4	191,162,150,245,	0,1158,1410,3996,
#Partially deleted in new
chr17	42107692	42112486	chr17:42107692-42112486	0	-	42107692	42111892	789624	7	103,127,117,191,202,169,374,	0,289,1577,3030,3603,4032,4420,
#Deleted in new
chr17	42110778	42112714	chr17:42110778-42112714	0	-	42110778	42111458	789624	4	135,202,93,110,	0,517,1334,1826,
#Deleted in new
chr17	42110815	42112463	chr17:42110815-42112463	0	-	42110815	42111892	789624	5	98,202,169,93,168,	0,480,909,1297,1480,
#Partially deleted in new
chr17	42113107	42121358	chr17:42113107-42121358	3	-	42113648	42121304	0	18	735,85,64,37,115,144,111,127,209,137,111,107,192,182,90,146,124,393,	0,892,1111,1250,1382,1784,2615,3927,4280,4570,4799,5189,6137,6429,6922,7117,7598,7858,
#Partially deleted in new
chr17	42113117	42121058	chr17:42113117-42121058	0	-	42119240	42121058	789624	18	725,85,64,37,115,144,111,127,209,137,111,107,383,182,90,146,124,93,	0,882,1101,1240,1372,1774,2605,3917,4270,4560,4789,5179,5936,6419,6912,7107,7588,7848,
#Deleted in new
chr17	42113389	42114398	chr17:42113389-42114398	0	-	42113389	42113389	8553170	2	453,399,	0,610,
#Deleted in new
chr17	42114223	42115833	chr17:42114223-42115833	0	-	42114584	42115833	789624	5	59,37,115,82,111,	0,134,266,730,1499,
#Partially deleted in new
chr17	42115692	42117489	chr17:42115692-42117489	0	-	42115692	42115692	8553170	2	141,455,	0,1342,
#Partially deleted in new
chr17	42119673	42125866	chr17:42119673-42125866	0	-	42125782	42125866	789624	5	45,90,146,124,241,	0,356,551,1032,5952,
#Partially deleted in new
chr17	42119673	42130564	chr17:42119673-42130564	0	-	42120325	42130502	789624	5	45,146,123,152,228,	0,551,8587,8975,10663,
#Partially deleted in new
chr17	42119673	42154916	chr17:42119673-42154916	3	-	42119673	42130502	789624	8	45,90,146,124,123,152,254,24,	0,356,551,1032,8587,8975,10663,35219,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	42121430	42123352	chr17:42121430-42123352	3	+	42122850	42123330	789624	1	1922,	0,
#Partially deleted in new
chr17	42124975	42155017	chr17:42124975-42155017	1	-	42125782	42130502	0	6	923,94,123,152,254,125,	0,1779,3285,3673,5361,29917,
#Partially deleted in new
chr17	42124977	42155044	chr17:42124977-42155044	3	-	42125782	42130502	0	7	921,94,123,152,254,216,152,	0,1777,3283,3671,5359,6629,29915,
#Partially deleted in new
chr17	42125666	42154988	chr17:42125666-42154988	1	-	42125782	42131617	0	7	232,94,123,152,254,216,96,	0,1088,2594,2982,4670,5940,29226,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	42126522	42128759	chr17:42126522-42128759	0	-	42126629	42128759	789624	3	326,123,111,	0,1738,2126,
#Partially deleted in new
chr17	42128329	42136431	chr17:42128329-42136431	0	-	42128329	42130502	789624	4	54,152,254,91,	0,319,2007,8011,
#Partially deleted in new
chr17	42128550	42154992	chr17:42128550-42154992	0	-	42128550	42128550	8553170	3	250,254,104,	0,1786,26338,
#Partially deleted in new
chr17	42128691	42136484	chr17:42128691-42136484	0	-	42128691	42130502	789624	3	109,254,220,	0,1645,7573,
#Partially deleted in new
chr17	42130160	42155017	chr17:42130160-42155017	0	-	42130160	42130160	8553170	2	430,125,	0,24732,
#Partially deleted in new
chr17	42154599	42155972	chr17:42154599-42155972	3	+	42154599	42154599	8553170	3	110,110,205,	0,399,1168,
#Partially deleted in new
chr17	42156890	42181081	chr17:42156890-42181081	1	-	42160039	42180945	789624	17	228,701,74,107,353,39,245,250,200,195,208,158,244,128,147,234,212,	0,2844,5357,6337,6715,7239,8558,9406,12586,13216,14897,18688,19163,21209,21440,21902,23979,
#Partially deleted in new
chr17	42156894	42181278	chr17:42156894-42181278	3	-	42160039	42180945	789624	17	224,705,74,107,353,39,245,250,200,195,208,158,244,128,147,234,409,	0,2836,5353,6333,6711,7235,8554,9402,12582,13212,14893,18684,19159,21205,21436,21898,23975,
#Deleted in new
chr17	42184059	42185452	chr17:42184059-42185452	3	-	42184153	42185365	0	2	469,108,	0,1285,
#Partially deleted in new
chr17	42188798	42194459	chr17:42188798-42194459	3	-	42189021	42193581	789624	10	289,86,134,72,193,502,122,278,84,67,	0,1386,1825,2033,2219,3442,4107,4518,4968,5594,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	42189087	42194195	chr17:42189087-42194195	1	-	42189702	42193581	789624	9	834,86,134,72,193,502,122,278,429,	0,1097,1536,1744,1930,3153,3818,4229,4679,
#Partially deleted in new
chr17	42189087	42194494	chr17:42189087-42194494	1	-	42190222	42193581	789624	10	834,175,134,72,193,502,122,278,84,102,	0,1097,1536,1744,1930,3153,3818,4229,4679,5305,
#Partially deleted in new
chr17	42189088	42194484	chr17:42189088-42194484	1	-	42189702	42193581	789624	10	833,86,134,72,193,502,122,278,84,92,	0,1096,1535,1743,1929,3152,3817,4228,4678,5304,
#Partially deleted in new
chr17	42189089	42194532	chr17:42189089-42194532	1	-	42190222	42193581	789624	9	832,175,134,72,193,502,122,288,200,	0,1095,1534,1742,1928,3151,3816,4227,5243,
#Deleted in new
chr17	42189942	42191070	chr17:42189942-42191070	0	-	42189942	42189942	8553170	3	815,72,53,	0,889,1075,
#Partially deleted in new
chr17	42192544	42194478	chr17:42192544-42194478	0	-	42193027	42193581	789624	5	198,196,278,84,86,	0,361,772,1222,1848,
#Partially deleted in new
chr17	42192691	42194502	chr17:42192691-42194502	0	-	42192691	42193581	789624	4	51,122,278,110,	0,214,625,1701,
#Partially deleted in new
chr17	42192738	42194487	chr17:42192738-42194487	0	-	42192738	42193581	789624	5	4,122,278,84,71,	0,167,578,1028,1678,
#Partially deleted in new
chr17	42192930	42194513	chr17:42192930-42194513	0	-	42192930	42192930	8553170	4	59,278,84,121,	0,386,836,1462,
#Partially deleted in new
chr17	42192951	42194308	chr17:42192951-42194308	0	-	42192951	42192951	8553170	4	150,278,84,73,	0,365,815,1284,
#Partially deleted in new
chr17	42193188	42194494	chr17:42193188-42194494	0	-	42193188	42193188	8553170	3	406,84,102,	0,578,1204,
#Partially deleted in new
chr17	42199167	42276406	chr17:42199167-42276406	3	-	42201737	42232127	789624	19	2697,108,52,171,131,95,207,93,123,88,180,156,152,131,175,90,157,138,159,	0,3172,3589,8390,11003,11235,12816,16846,17992,18209,18983,19555,20144,20544,24214,25611,28361,32832,77080,
#Partially deleted in new
chr17	42202102	42202953	chr17:42202102-42202953	0	-	42202102	42202102	8553170	2	345,197,	0,654,
#Partially deleted in new
chr17	42207558	42210592	chr17:42207558-42210592	0	-	42207558	42207558	8553170	3	170,131,190,	0,2612,2844,
#Partially deleted in new
chr17	42207581	42217282	chr17:42207581-42217282	0	-	42207581	42207581	8553170	5	147,327,207,93,123,	0,2589,4402,8432,9578,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	42210416	42217871	chr17:42210416-42217871	0	-	42210416	42210416	8553170	5	81,207,93,123,495,	0,1567,5597,6743,6960,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	42217689	42276406	chr17:42217689-42276406	0	-	42217689	42217689	8553170	9	641,156,152,131,175,90,157,138,159,	0,1033,1622,2022,5692,7089,9839,14310,58558,
#Partially deleted in new
chr17	42223462	42276707	chr17:42223462-42276707	0	-	42223462	42232127	789624	5	94,90,157,138,80,	0,1316,4066,8537,53165,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	42233831	42235469	chr17:42233831-42235469	3	+	42233831	42233831	8553170	1	1638,	0,
#Partially deleted in new
chr17	42268586	42269807	chr17:42268586-42269807	3	+	42268586	42268586	8553170	2	129,367,	0,854,
#Deleted in new
chr17	42270516	42272683	chr17:42270516-42272683	3	-	42270516	42270516	8553170	2	1256,240,	0,1927,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	42272068	42275571	chr17:42272068-42275571	3	-	42272068	42272068	8553170	2	143,676,	0,2827,
#Partially deleted in new
chr17	42287546	42311943	chr17:42287546-42311943	3	+	42289411	42310669	789624	20	89,543,138,157,90,175,131,152,156,180,88,123,93,207,95,131,156,52,108,1437,	0,509,1855,2319,4425,8072,12204,12583,13168,13728,16795,16983,18063,18694,19855,20046,20631,21500,21830,22960,
#Partially deleted in new
chr17	42287866	42310860	chr17:42287866-42310860	1	+	42289411	42310669	789624	19	732,138,157,90,175,131,152,156,180,88,123,93,207,95,131,156,52,108,354,	0,1535,1999,4105,7752,11884,12263,12848,13408,16475,16663,17743,18374,19535,19726,20311,21180,21510,22640,
#Partially deleted in new
chr17	42288075	42310927	chr17:42288075-42310927	1	+	42289411	42310669	789624	18	523,138,157,175,131,152,156,180,88,123,93,207,95,131,156,52,108,421,	0,1326,1790,7543,11675,12054,12639,13199,16266,16454,17534,18165,19326,19517,20102,20971,21301,22431,
#Partially deleted in new
chr17	42288468	42300281	chr17:42288468-42300281	0	+	42295651	42300281	789624	6	130,157,90,175,131,152,	0,1397,3503,7150,11282,11661,
#Deleted in new
chr17	42288488	42290179	chr17:42288488-42290179	0	+	42288488	42288488	8553170	3	110,138,314,	0,913,1377,
#Partially deleted in new
chr17	42288500	42292061	chr17:42288500-42292061	0	+	42289411	42292061	789624	4	98,170,157,90,	0,869,1365,3471,
#Partially deleted in new
chr17	42288542	42311940	chr17:42288542-42311940	1	+	42289411	42310669	789624	18	56,138,157,90,175,131,152,156,180,88,123,207,95,131,156,52,108,1434,	0,859,1323,3429,7076,11208,11587,12172,12732,15799,15987,17698,18859,19050,19635,20504,20834,21964,
#Partially deleted in new
chr17	42289212	42292037	chr17:42289212-42292037	0	+	42289212	42289212	8553170	3	327,157,66,	0,653,2759,
#Partially deleted in new
chr17	42304178	42306326	chr17:42304178-42306326	0	+	42304178	42304178	8553170	4	251,123,93,86,	0,351,1431,2062,
#Partially deleted in new
chr17	42306113	42310523	chr17:42306113-42310523	0	+	42306113	42306113	8553170	7	334,95,131,156,52,108,17,	0,1288,1479,2064,2933,3263,4393,
#Partially deleted in new
chr17	42306115	42308759	chr17:42306115-42308759	0	+	42306115	42306115	8553170	4	332,95,131,582,	0,1286,1477,2062,
#Partially deleted in new
chr17	42306169	42309686	chr17:42306169-42309686	1	+	42306303	42309488	789624	6	278,95,131,156,52,310,	0,1232,1423,2008,2877,3207,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr17	42313323	42388568	chr17:42313323-42388568	3	-	42315744	42348516	0	24	2477,113,43,213,140,95,53,136,99,84,48,94,30,60,93,159,152,95,82,96,99,145,151,290,	0,3465,3858,8958,9680,9936,10249,11387,11639,12792,16086,16230,16423,18148,20349,20567,24111,24439,25407,25990,32235,33245,35065,74955,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr17	42314853	42388439	chr17:42314853-42388439	1	-	42316826	42348516	0	24	947,63,43,213,140,95,53,136,99,84,48,94,30,60,93,159,152,95,82,96,99,145,132,161,	0,1935,2328,7428,8150,8406,8719,9857,10109,11262,14556,14700,14893,16618,18819,19037,22581,22909,23877,24460,30705,31715,33535,73425,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	42314871	42316853	chr17:42314871-42316853	0	-	42314871	42314871	8553170	1	1982,	0,
#Partially deleted in new
chr17	42315467	42388431	chr17:42315467-42388431	1	-	42315744	42345636	789624	23	333,113,43,213,140,95,53,136,99,84,48,94,30,60,93,159,152,95,82,96,99,145,153,	0,1321,1714,6814,7536,7792,8105,9243,9495,10648,13942,14086,14279,16004,18205,18423,21967,22295,23263,23846,30091,31101,72811,
#Partially deleted in new
chr17	42315490	42388482	chr17:42315490-42388482	1	-	42315744	42348516	0	24	310,113,43,213,140,95,53,136,99,84,48,94,30,60,93,159,152,95,82,96,99,145,129,204,	0,1298,1691,6791,7513,7769,8082,9220,9472,10625,13919,14063,14256,15981,18182,18400,21944,22272,23240,23823,30068,31078,32898,72788,
#Partially deleted in new
chr17	42315510	42317223	chr17:42315510-42317223	0	-	42315510	42315510	8553170	2	290,435,	0,1278,
#Partially deleted in new
chr17	42315558	42388414	chr17:42315558-42388414	1	-	42315744	42348516	0	24	242,113,43,210,140,95,53,136,99,84,48,94,30,60,93,159,152,95,82,96,99,145,129,136,	0,1230,1623,6726,7445,7701,8014,9152,9404,10557,13851,13995,14188,15913,18114,18332,21876,22204,23172,23755,30000,31010,32830,72720,
#Partially deleted in new
chr17	42315596	42317562	chr17:42315596-42317562	0	-	42315596	42315596	8553170	3	204,113,381,	0,1192,1585,
#Partially deleted in new
chr17	42323034	42325061	chr17:42323034-42325061	0	-	42323034	42323034	8553170	3	591,136,99,	0,1676,1928,
#Partially deleted in new
chr17	42323063	42325157	chr17:42323063-42325157	0	-	42323063	42323063	8553170	5	80,95,53,136,195,	0,196,509,1647,1899,
#Partially deleted in new
chr17	42329657	42331538	chr17:42329657-42331538	0	-	42329657	42329657	8553170	2	119,67,	0,1814,
#Partially deleted in new
chr17	42345413	42348516	chr17:42345413-42348516	0	-	42345413	42345413	8553170	3	244,145,128,	0,1155,2975,
#Partially deleted in new
chr17	42346595	42388454	chr17:42346595-42388454	0	-	42346595	42374063	789624	4	118,129,148,176,	0,1793,27463,41683,
#Deleted in new
chr17	42386938	42388421	chr17:42386938-42388421	0	-	42386938	42386938	8553170	1	1483,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	42402451	42423517	chr17:42402451-42423517	3	-	42404686	42423097	789624	2	2937,891,	0,20175,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	42440197	42440259	chr17:42440197-42440259	3	-	42440197	42440197	8553170	1	62,	0,
#Partially deleted in new
chr17	42458843	42521485	chr17:42458843-42521485	3	+	42460894	42521120	789624	21	120,164,79,98,129,83,127,83,94,213,151,140,155,91,119,217,108,108,118,172,459,	0,2004,7585,9166,11246,18816,19619,21823,24194,28311,31643,35490,36190,36782,40080,41863,42353,48676,55017,55445,62183,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	42458857	42471439	chr17:42458857-42471439	0	+	42458857	42458857	8553170	5	106,164,79,98,1350,	0,1990,7571,9152,11232,
#Partially deleted in new
chr17	42458877	42521394	chr17:42458877-42521394	1	+	42460894	42521120	789624	20	86,164,79,98,83,127,83,94,213,151,140,155,91,119,217,108,108,118,172,368,	0,1970,7551,9132,18782,19585,21789,24160,28277,31609,35456,36156,36748,40046,41829,42319,48642,54983,55411,62149,
#Partially deleted in new
chr17	42458877	42478510	chr17:42458877-42478510	0	+	42460894	42470100	789624	6	86,164,79,129,83,48,	0,1970,7551,11212,18782,19585,
#Partially deleted in new
chr17	42458879	42522582	chr17:42458879-42522582	1	+	42460894	42521120	789624	21	84,164,79,98,129,104,127,83,94,213,151,140,155,91,119,217,108,108,118,172,1556,	0,1968,7549,9130,11210,18759,19583,21787,24158,28275,31607,35454,36154,36746,40044,41827,42317,48640,54981,55409,62147,
#Partially deleted in new
chr17	42458887	42522611	chr17:42458887-42522611	1	+	42460894	42521120	789624	22	76,164,79,98,129,83,127,83,94,213,151,140,155,91,119,217,108,108,18,118,172,1585,	0,1960,7541,9122,11202,18772,19575,21779,24150,28267,31599,35446,36146,36738,40036,41819,42309,48632,49684,54973,55401,62139,
#Partially deleted in new
chr17	42458887	42521291	chr17:42458887-42521291	1	+	42460894	42521120	789624	21	76,164,79,98,83,127,83,94,213,151,140,155,91,119,217,108,108,18,118,172,265,	0,1960,7541,9122,18772,19575,21779,24150,28267,31599,35446,36146,36738,40036,41819,42309,48632,49684,54973,55401,62139,
#Partially deleted in new
chr17	42458903	42522578	chr17:42458903-42522578	1	+	42490525	42521120	789624	15	60,17,21,151,140,155,91,119,217,108,108,18,118,172,1552,	0,1944,28443,31583,35430,36130,36722,40020,41803,42293,48616,49668,54957,55385,62123,
#Partially deleted in new
chr17	42458940	42483092	chr17:42458940-42483092	0	+	42460894	42483092	789624	7	23,164,129,83,127,83,55,	0,1907,11149,18719,19522,21726,24097,
#Partially deleted in new
chr17	42459068	42470187	chr17:42459068-42470187	0	+	42460894	42470187	789624	5	115,164,79,98,98,	0,1779,7360,8941,11021,
#Partially deleted in new
chr17	42460182	42468093	chr17:42460182-42468093	0	+	42460894	42468093	789624	4	253,164,79,84,	0,665,6246,7827,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	42470181	42480965	chr17:42470181-42480965	0	+	42470181	42470181	8553170	4	37,83,127,299,	0,7478,8281,10485,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	42477642	42478949	chr17:42477642-42478949	0	+	42477642	42477642	8553170	2	100,487,	0,820,
#Partially deleted in new
chr17	42480262	42487353	chr17:42480262-42487353	0	+	42480262	42480262	8553170	3	487,94,199,	0,2775,6892,
#Partially deleted in new
chr17	42490536	42494589	chr17:42490536-42494589	0	+	42490536	42490536	8553170	2	101,256,	0,3797,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	42495866	42496550	chr17:42495866-42496550	3	+	42495866	42495866	8553170	1	684,	0,
#Partially deleted in new
chr17	42500781	42513941	chr17:42500781-42513941	0	+	42500781	42510088	789624	5	142,108,108,125,81,	0,415,6738,9277,13079,
#Partially deleted in new
chr17	42500812	42521444	chr17:42500812-42521444	0	+	42500812	42521130	789624	6	111,108,108,18,118,418,	0,384,6707,7759,13048,20214,
#Partially deleted in new
chr17	42501241	42521045	chr17:42501241-42521045	0	+	42501241	42521045	789624	7	63,75,108,18,118,172,19,	0,1552,6278,7330,12619,13047,19785,
#Partially deleted in new
chr17	42507334	42522582	chr17:42507334-42522582	0	+	42507334	42507334	8553170	4	293,118,172,1556,	0,6526,6954,13692,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	42509783	42511519	chr17:42509783-42511519	3	+	42509783	42509783	8553170	1	1736,	0,
#Partially deleted in new
chr17	42513441	42521159	chr17:42513441-42521159	0	+	42513441	42513441	8553170	3	537,172,133,	0,847,7585,
#Deleted in new
chr17	42514187	42514307	chr17:42514187-42514307	3	+	42514187	42514187	5263520	1	120,	0,
#Deleted in new
chr17	42517926	42522578	chr17:42517926-42522578	0	+	42517926	42517926	8553170	1	4652,	0,
#Deleted in new
chr17	42520334	42522577	chr17:42520334-42522577	0	+	42520334	42520334	8553170	2	327,1551,	0,692,
#Deleted in new
chr17	42520382	42521785	chr17:42520382-42521785	0	+	42520382	42520382	8553170	2	241,759,	0,644,
#Partially deleted in new
chr17	42533531	42534009	chr17:42533531-42534009	7	+	42533531	42533531	16724991	1	478,	0,
#Partially deleted in new
chr17	42536171	42544449	chr17:42536171-42544449	3	+	42536272	42544238	0	6	484,148,147,86,257,1422,	0,1226,2167,2498,4778,6856,
#Partially deleted in new
chr17	42536509	42562062	chr17:42536509-42562062	3	+	42536509	42536509	8553170	5	146,147,86,62,153,	0,1829,2160,25109,25400,
#Partially deleted in new
chr17	42536522	42541093	chr17:42536522-42541093	0	+	42536522	42541093	789624	4	133,147,86,144,	0,1816,2147,4427,
#Partially deleted in new
chr17	42536529	42544161	chr17:42536529-42544161	0	+	42536529	42543037	789624	4	126,147,86,1134,	0,1809,2140,6498,
#Partially deleted in new
chr17	42536937	42538364	chr17:42536937-42538364	0	+	42537326	42538364	789624	2	608,26,	0,1401,
#Partially deleted in new
chr17	42541090	42543549	chr17:42541090-42543549	0	+	42541090	42543163	789624	2	116,466,	0,1993,
#Deleted in new
chr17	42546763	42548706	chr17:42546763-42548706	7	+	42546763	42546763	16724991	6	97,168,171,94,178,247,	0,190,504,842,1432,1696,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	42549213	42555213	chr17:42549213-42555213	3	+	42552933	42554938	0	6	3817,168,180,94,178,545,	0,3910,4225,4580,5191,5455,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	42552435	42554748	chr17:42552435-42554748	3	-	42552435	42552435	789624	1	2313,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	42552921	42554238	chr17:42552921-42554238	0	+	42552921	42552921	8553170	3	109,168,800,	0,202,517,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	42552922	42554051	chr17:42552922-42554051	0	+	42552922	42552922	8553170	2	108,928,	0,201,
#Partially deleted in new
chr17	42552922	42555093	chr17:42552922-42555093	0	+	42552933	42554409	789624	5	108,168,180,178,425,	0,201,516,1482,1746,
#Partially deleted in new
chr17	42552933	42555213	chr17:42552933-42555213	1	+	42552933	42554938	789624	6	97,168,180,94,181,545,	0,190,505,860,1468,1735,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	42561466	42562269	chr17:42561466-42562269	0	+	42561466	42561466	8553170	2	214,360,	0,443,
#Deleted in new
chr17	42562133	42562894	chr17:42562133-42562894	0	+	42562622	42562894	789624	2	86,539,	0,222,
#Deleted in new
chr17	42562136	42562830	chr17:42562136-42562830	0	+	42562411	42562830	789624	2	351,219,	0,475,
#Deleted in new
chr17	42562141	42563281	chr17:42562141-42563281	0	+	42562622	42563281	789624	2	72,670,	0,470,
#Deleted in new
chr17	42562146	42566260	chr17:42562146-42566260	3	+	42562622	42565968	789624	10	73,711,215,132,190,65,85,98,147,355,	0,465,1814,2299,2562,2836,3080,3324,3512,3759,
#Deleted in new
chr17	42562147	42564893	chr17:42562147-42564893	0	+	42564145	42564893	789624	5	72,390,215,132,185,	0,785,1813,2298,2561,
#Deleted in new
chr17	42562150	42563146	chr17:42562150-42563146	0	+	42562411	42563146	789624	2	337,214,	0,782,
#Deleted in new
chr17	42562150	42563064	chr17:42562150-42563064	0	+	42562622	42563064	789624	2	86,453,	0,461,
#Deleted in new
chr17	42562150	42562919	chr17:42562150-42562919	0	+	42562411	42562919	789624	3	69,192,308,	0,145,461,
#Deleted in new
chr17	42562150	42566037	chr17:42562150-42566037	1	+	42562411	42565968	789624	11	69,132,711,215,132,190,65,85,98,147,132,	0,205,461,1810,2295,2558,2832,3076,3320,3508,3755,
#Deleted in new
chr17	42562166	42566275	chr17:42562166-42566275	1	+	42562622	42565968	789624	9	1156,215,132,190,65,85,98,147,370,	0,1794,2279,2542,2816,3060,3304,3492,3739,
#Deleted in new
chr17	42563306	42566274	chr17:42563306-42566274	0	+	42563306	42563306	8553170	7	1271,190,65,85,98,147,369,	0,1402,1676,1920,2164,2352,2599,
#Deleted in new
chr17	42564014	42564671	chr17:42564014-42564671	0	+	42564014	42564014	8553170	2	161,226,	0,431,
#Deleted in new
chr17	42565461	42566277	chr17:42565461-42566277	0	+	42565461	42565461	8553170	2	344,372,	0,444,
#Partially deleted in new
chr17	42567067	42573239	chr17:42567067-42573239	1	+	42567124	42571603	789624	8	99,37,90,107,100,100,202,1693,	0,551,1402,1769,2136,2439,2914,4479,
#Partially deleted in new
chr17	42567071	42573239	chr17:42567071-42573239	3	+	42567124	42571603	789624	8	257,37,90,107,100,100,202,1693,	0,547,1398,1765,2132,2435,2910,4475,
#Partially deleted in new
chr17	42567071	42573239	chr17:42567071-42573239	1	+	42567124	42571603	789624	7	95,37,107,100,100,202,1693,	0,547,1765,2132,2435,2910,4475,
#Partially deleted in new
chr17	42567071	42573239	chr17:42567071-42573239	0	+	42567071	42567071	8553170	6	95,37,107,403,202,1693,	0,547,1765,2132,2910,4475,
#Partially deleted in new
chr17	42567073	42570178	chr17:42567073-42570178	0	+	42567124	42570178	789624	6	255,37,107,100,100,197,	0,545,1763,2130,2433,2908,
#Partially deleted in new
chr17	42567098	42569290	chr17:42567098-42569290	0	+	42567098	42567098	8553170	4	68,37,474,87,	0,520,1371,2105,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	42567101	42568104	chr17:42567101-42568104	0	+	42567101	42567101	8553170	2	65,486,	0,517,
#Partially deleted in new
chr17	42567102	42571729	chr17:42567102-42571729	0	+	42567102	42567102	8553170	5	64,37,107,677,183,	0,516,1734,2404,4444,
#Partially deleted in new
chr17	42567116	42569499	chr17:42567116-42569499	0	+	42567116	42567116	8553170	4	44,37,474,296,	0,502,1353,2087,
#Partially deleted in new
chr17	42567280	42568898	chr17:42567280-42568898	0	+	42567280	42567280	8553170	3	48,37,429,	0,338,1189,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	42568076	42572705	chr17:42568076-42572705	0	+	42568076	42568076	8553170	5	867,100,100,87,1159,	0,1127,1430,2020,3470,
#Partially deleted in new
chr17	42572314	42577795	chr17:42572314-42577795	3	-	42572967	42577686	789624	8	710,60,54,146,112,90,101,143,	0,792,996,1163,1784,4898,5146,5338,
#Partially deleted in new
chr17	42572322	42577831	chr17:42572322-42577831	1	-	42572967	42577686	789624	8	702,60,54,110,112,90,101,179,	0,784,988,1155,1776,4890,5138,5330,
#Partially deleted in new
chr17	42572342	42577697	chr17:42572342-42577697	1	-	42572967	42577248	789624	7	682,60,54,146,112,90,237,	0,764,968,1135,1756,4870,5118,
#Partially deleted in new
chr17	42572895	42577688	chr17:42572895-42577688	0	-	42574199	42577686	789624	9	129,60,54,146,112,19,90,101,36,	0,211,415,582,1203,1420,4317,4565,4757,
#Partially deleted in new
chr17	42572961	42577795	chr17:42572961-42577795	0	-	42577179	42577686	789624	8	63,60,54,146,112,223,101,143,	0,145,349,516,1137,4118,4499,4691,
#Partially deleted in new
chr17	42572961	42577795	chr17:42572961-42577795	0	-	42572961	42572961	8553170	7	63,60,54,733,90,101,143,	0,145,349,516,4251,4499,4691,
#Partially deleted in new
chr17	42572961	42577696	chr17:42572961-42577696	1	-	42572967	42573585	789624	7	63,60,54,146,15,90,236,	0,145,349,516,1234,4251,4499,
#Partially deleted in new
chr17	42572961	42577795	chr17:42572961-42577795	0	-	42574084	42577686	789624	8	63,60,54,146,392,90,101,143,	0,145,349,516,857,4251,4499,4691,
#Partially deleted in new
chr17	42576676	42577672	chr17:42576676-42577672	0	-	42576676	42576676	8553170	2	626,212,	0,784,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	42579512	42609377	chr17:42579512-42609377	0	-	42609081	42609324	789624	8	2758,133,83,138,85,127,107,718,	0,3161,3985,5612,6540,7252,12543,29147,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	42579514	42609384	chr17:42579514-42609384	3	-	42581812	42609324	789624	9	2756,133,83,138,85,127,31,107,299,	0,3159,3983,5610,6538,7250,8319,12541,29571,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	42581328	42610623	chr17:42581328-42610623	1	-	42581812	42592110	789624	9	942,133,83,138,85,127,31,107,87,	0,1345,2169,3796,4724,5436,6505,10727,29208,
#Partially deleted in new
chr17	42581612	42609386	chr17:42581612-42609386	0	-	42586835	42609324	789624	8	658,133,83,138,85,127,107,301,	0,1061,1885,3512,4440,5152,10443,27473,
#Partially deleted in new
chr17	42582734	42586957	chr17:42582734-42586957	0	-	42582734	42582734	8553170	5	72,83,138,85,193,	0,763,2390,3318,4030,
#Partially deleted in new
chr17	42585124	42609384	chr17:42585124-42609384	0	-	42586124	42609324	789624	3	138,85,299,	0,928,23961,
#Deleted in new
chr17	42585124	42586432	chr17:42585124-42586432	0	-	42585124	42585124	8553170	2	138,380,	0,928,
#Partially deleted in new
chr17	42585200	42610593	chr17:42585200-42610593	0	-	42585200	42592110	789624	7	62,85,127,31,107,95,57,	0,852,1564,2633,6855,11332,25336,
#Partially deleted in new
chr17	42585210	42609375	chr17:42585210-42609375	0	-	42586124	42609324	789624	5	52,85,31,107,290,	0,842,2623,6845,23875,
#Partially deleted in new
chr17	42586767	42610603	chr17:42586767-42610603	0	-	42586767	42609562	789624	5	124,31,107,230,67,	0,1066,5288,22730,23769,
#Partially deleted in new
chr17	42587694	42609384	chr17:42587694-42609384	0	-	42587694	42587694	8553170	3	170,107,299,	0,4361,21391,
#Partially deleted in new
chr17	42592131	42609324	chr17:42592131-42609324	0	-	42605284	42609324	789624	4	31,95,44,239,	0,4401,13116,16954,
#Partially deleted in new
chr17	42598642	42599177	chr17:42598642-42599177	3	+	42598642	42598642	8553170	1	535,	0,
#Partially deleted in new
chr17	42609675	42615234	chr17:42609675-42615234	3	+	42609737	42615041	0	11	111,113,168,69,80,127,87,150,153,162,391,	0,432,747,2399,2751,3271,3971,4173,4584,4820,5168,
#Partially deleted in new
chr17	42609685	42612266	chr17:42609685-42612266	0	+	42609685	42609685	8553170	4	101,113,168,192,	0,422,737,2389,
#Partially deleted in new
chr17	42609685	42613911	chr17:42609685-42613911	0	+	42609737	42613911	789624	8	101,113,207,69,80,127,87,63,	0,422,737,2389,2741,3261,3961,4163,
#Partially deleted in new
chr17	42609688	42615221	chr17:42609688-42615221	0	+	42609737	42612955	789624	10	98,113,168,69,127,87,150,153,162,378,	0,419,734,2386,3258,3958,4160,4571,4807,5155,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	42609715	42611267	chr17:42609715-42611267	0	+	42609715	42609715	8553170	2	71,845,	0,707,
#Partially deleted in new
chr17	42647833	42648143	chr17:42647833-42648143	7	+	42647833	42647833	16724991	1	310,	0,
#Partially deleted in new
chr17	42648177	42648738	chr17:42648177-42648738	7	+	42648177	42648177	16724991	1	561,	0,
#Partially deleted in new
chr17	42659304	42667006	chr17:42659304-42667006	3	+	42659503	42666800	789624	11	248,113,168,69,80,127,87,150,153,162,404,	0,529,844,1334,3668,4072,6171,6373,6782,7018,7298,
#Partially deleted in new
chr17	42659306	42666822	chr17:42659306-42666822	0	+	42659306	42659306	8553170	9	640,168,69,127,87,150,153,162,220,	0,842,1332,4070,6169,6371,6780,7016,7296,
#Partially deleted in new
chr17	42660259	42661391	chr17:42660259-42661391	0	+	42660259	42660259	8553170	2	103,753,	0,379,
#Partially deleted in new
chr17	42667913	42676951	chr17:42667913-42676951	3	-	42668126	42676563	789624	13	390,192,459,133,137,208,307,121,158,192,80,56,550,	0,1516,2004,2659,3080,3437,4172,5262,5485,5729,6020,6440,8488,
#Partially deleted in new
chr17	42667913	42676633	chr17:42667913-42676633	0	-	42669491	42676563	789624	13	390,192,434,133,137,208,307,121,158,192,80,56,232,	0,1516,2029,2659,3080,3437,4172,5262,5485,5729,6020,6440,8488,
#Partially deleted in new
chr17	42667913	42669698	chr17:42667913-42669698	0	-	42667913	42667913	8553170	2	390,269,	0,1516,
#Partially deleted in new
chr17	42667916	42676090	chr17:42667916-42676090	0	-	42667916	42667916	789624	13	387,192,434,133,128,208,127,121,158,192,80,56,190,	0,1513,2026,2656,3086,3434,4169,5259,5482,5726,6017,6437,7984,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	42667916	42676897	chr17:42667916-42676897	0	-	42667916	42667916	8553170	11	2460,133,128,208,307,121,158,192,80,56,496,	0,2656,3086,3434,4169,5259,5482,5726,6017,6437,8485,
#Partially deleted in new
chr17	42667943	42676994	chr17:42667943-42676994	1	-	42668126	42676563	789624	13	360,192,459,133,128,208,307,121,158,192,80,56,593,	0,1486,1974,2629,3059,3407,4142,5232,5455,5699,5990,6410,8458,
#Deleted in new
chr17	42673169	42674400	chr17:42673169-42674400	0	-	42673169	42673169	8553170	5	151,158,192,80,47,	0,229,473,764,1184,
#Partially deleted in new
chr17	42673398	42676061	chr17:42673398-42676061	0	-	42673398	42673398	8553170	5	158,192,80,56,131,	0,244,535,955,2532,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	42673649	42676992	chr17:42673649-42676992	0	-	42673649	42676563	789624	5	185,80,56,135,591,	0,284,704,1091,2752,
#Partially deleted in new
chr17	42678888	42681843	chr17:42678888-42681843	3	-	42679552	42681823	789624	2	1729,44,	0,2911,
#Partially deleted in new
chr17	42679419	42683064	chr17:42679419-42683064	1	-	42679552	42679975	789624	2	1198,744,	0,2901,
#Partially deleted in new
chr17	42679725	42683917	chr17:42679725-42683917	0	-	42679725	42679975	789624	2	892,102,	0,4090,
#Partially deleted in new
chr17	42679962	42682020	chr17:42679962-42682020	3	+	42679962	42679962	8553170	3	439,75,28,	0,1401,2030,
#Partially deleted in new
chr17	42682612	42699814	chr17:42682612-42699814	3	+	42682829	42698910	789624	24	284,102,194,148,204,185,144,262,150,172,107,120,204,157,128,186,222,240,354,128,94,246,48,1197,	0,1208,1423,2378,2604,3344,4290,5107,5849,6263,6908,7475,8126,8524,8771,9193,9886,10684,12908,13412,14661,14941,15290,16005,
#Partially deleted in new
chr17	42682698	42699139	chr17:42682698-42699139	0	+	42682829	42691406	789624	24	198,102,194,148,204,185,144,262,150,172,107,120,204,141,128,186,222,240,354,128,94,246,48,522,	0,1122,1337,2292,2518,3258,4204,5021,5763,6177,6822,7389,8040,8454,8685,9107,9800,10598,12822,13326,14575,14855,15204,15919,
#Partially deleted in new
chr17	42683186	42699466	chr17:42683186-42699466	3	-	42683186	42683186	8553170	2	356,363,	0,15917,
#Partially deleted in new
chr17	42687260	42688578	chr17:42687260-42688578	0	+	42687260	42687260	8553170	2	721,117,	0,1201,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	42689777	42690921	chr17:42689777-42690921	0	+	42689777	42689777	8553170	2	430,183,	0,961,
#Partially deleted in new
chr17	42700274	42745042	chr17:42700274-42745042	1	-	42702531	42728941	789624	21	2318,85,81,82,96,179,126,41,92,197,181,92,164,103,177,121,120,102,128,91,32,	0,2602,3465,4327,4813,5732,7683,8601,9571,12014,12934,17701,18179,18830,19998,22520,24030,27387,28550,30553,44736,
#Partially deleted in new
chr17	42700274	42745030	chr17:42700274-42745030	3	-	42702531	42728941	789624	21	2318,85,81,82,96,179,126,41,92,197,181,92,164,103,177,121,120,129,128,91,20,	0,2602,3465,4327,4813,5732,7683,8601,9571,12014,12934,17701,18179,18830,19998,22520,24030,27360,28550,30553,44736,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	42702291	42703169	chr17:42702291-42703169	0	-	42702291	42702291	8553170	2	301,293,	0,585,
#Partially deleted in new
chr17	42702324	42745049	chr17:42702324-42745049	1	-	42702531	42728941	789624	20	268,85,81,82,96,179,126,41,92,197,181,92,164,103,177,121,120,129,128,39,	0,552,1415,2277,2763,3682,5633,6551,7521,9964,10884,15651,16129,16780,17948,20470,21980,25310,26500,42686,
#Partially deleted in new
chr17	42702380	42745037	chr17:42702380-42745037	0	-	42720443	42728941	789624	19	212,85,81,82,96,179,126,41,92,197,181,92,164,103,177,129,128,91,27,	0,496,1359,2221,2707,3626,5577,6495,7465,9908,10828,15595,16073,16724,17892,25254,26444,28447,42630,
#Partially deleted in new
chr17	42702384	42745031	chr17:42702384-42745031	1	-	42702531	42728941	789624	20	208,85,81,82,96,179,126,41,92,197,181,92,164,103,177,121,129,128,91,21,	0,492,1355,2217,2703,3622,5573,6491,7461,9904,10824,15591,16069,16720,17888,20410,25250,26440,28443,42626,
#Partially deleted in new
chr17	42702384	42745037	chr17:42702384-42745037	1	-	42702531	42727670	789624	20	208,85,81,82,96,179,126,41,92,197,181,92,164,103,177,121,120,129,91,27,	0,492,1355,2217,2703,3622,5573,6491,7461,9904,10824,15591,16069,16720,17888,20410,21920,25250,28443,42626,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr17	42703192	42745015	chr17:42703192-42745015	0	-	42703192	42703192	8553170	19	628,82,96,179,126,41,92,197,181,92,164,103,177,121,120,129,128,91,5,	0,1409,1895,2814,4765,5683,6653,9096,10016,14783,15261,15912,17080,19602,21112,24442,25632,27635,41818,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr17	42703422	42745037	chr17:42703422-42745037	0	-	42703422	42703422	8553170	17	398,82,96,179,126,41,92,197,181,92,164,103,177,121,128,91,27,	0,1179,1665,2584,4535,5453,6423,8866,9786,14553,15031,15682,16850,19372,25402,27405,41588,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	42703426	42722872	chr17:42703426-42722872	0	-	42703426	42703426	8553170	11	394,82,96,179,126,41,92,197,181,177,78,	0,1175,1661,2580,4531,5449,6419,8862,9782,16846,19368,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr17	42703458	42745037	chr17:42703458-42745037	0	-	42703458	42703458	8553170	18	362,82,96,179,126,41,92,197,181,92,164,103,177,120,129,128,91,27,	0,1143,1629,2548,4499,5417,6387,8830,9750,14517,14995,15646,16814,20846,24176,25366,27369,41552,
#Partially deleted in new
chr17	42703790	42709656	chr17:42703790-42709656	0	-	42703790	42703790	8553170	7	30,82,96,107,126,41,113,	0,811,1297,2216,4167,5085,5753,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	42705582	42708919	chr17:42705582-42708919	0	-	42705582	42705582	8553170	3	603,126,44,	0,2375,3293,
#Partially deleted in new
chr17	42708002	42720304	chr17:42708002-42720304	0	-	42718048	42720304	789624	8	81,41,92,197,181,92,103,32,	0,873,1843,4286,5206,9973,11102,12270,
#Partially deleted in new
chr17	42708044	42709182	chr17:42708044-42709182	0	-	42708044	42708044	8553170	2	39,307,	0,831,
#Deleted in new
chr17	42708083	42708151	chr17:42708083-42708151	3	-	42708083	42708083	5263520	1	68,	0,
#Partially deleted in new
chr17	42712341	42722872	chr17:42712341-42722872	0	-	42713267	42722872	789624	4	144,181,177,78,	0,867,7931,10453,
#Partially deleted in new
chr17	42713375	42745040	chr17:42713375-42745040	0	-	42713375	42728941	789624	10	14,92,164,103,177,121,102,128,91,30,	0,4600,5078,5729,6897,9419,14286,15449,17452,31635,
#Deleted in new
chr17	42714298	42714643	chr17:42714298-42714643	7	+	42714298	42714298	16724991	1	345,	0,
#Partially deleted in new
chr17	42717975	42745037	chr17:42717975-42745037	0	-	42720443	42728941	789624	9	92,164,103,177,120,129,128,91,27,	0,478,1129,2297,6329,9659,10849,12852,27035,
#Partially deleted in new
chr17	42718005	42722809	chr17:42718005-42722809	0	-	42718005	42718005	8553170	3	612,177,15,	0,2267,4789,
#Deleted in new
chr17	42718100	42719178	chr17:42718100-42719178	0	-	42718100	42718100	8553170	2	517,74,	0,1004,
#Partially deleted in new
chr17	42720307	42745049	chr17:42720307-42745049	0	-	42720307	42728941	789624	5	142,121,129,128,39,	0,2487,7327,8517,24703,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	42720437	42745035	chr17:42720437-42745035	0	-	42720437	42728941	789624	8	12,121,120,129,128,91,119,25,	0,2357,3867,7197,8387,10390,11337,24573,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	42724350	42745030	chr17:42724350-42745030	0	-	42724350	42728941	789624	6	74,129,128,93,91,20,	0,3284,4474,4796,6477,20660,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	42724424	42745037	chr17:42724424-42745037	0	-	42724424	42724424	8553170	5	190,129,128,91,27,	0,3210,4400,6403,20586,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	42751288	42751717	chr17:42751288-42751717	3	-	42751288	42751288	8553170	1	429,	0,
#Deleted in new
chr17	42753529	42753799	chr17:42753529-42753799	7	-	42753529	42753529	16724991	1	270,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	42753913	42761257	chr17:42753913-42761257	3	-	42753913	42753913	789624	5	1300,142,88,77,378,	0,5825,6512,6721,6966,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	42753913	42761103	chr17:42753913-42761103	1	-	42753913	42753913	789624	4	2466,142,286,224,	0,5825,6512,6966,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	42753930	42761117	chr17:42753930-42761117	0	-	42753930	42753930	8553170	3	1283,142,692,	0,5808,6495,
#Partially deleted in new
chr17	42756198	42761119	chr17:42756198-42761119	0	-	42756198	42756198	8553170	4	181,142,286,240,	0,3540,4227,4681,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	42758294	42761011	chr17:42758294-42761011	0	-	42758294	42758294	8553170	4	728,142,286,132,	0,1444,2131,2585,
#Partially deleted in new
chr17	42758446	42761899	chr17:42758446-42761899	0	+	42758446	42758446	8553170	2	47,66,	0,3387,
#Deleted in new
chr17	42760774	42763041	chr17:42760774-42763041	1	+	42762416	42762852	789624	4	238,66,109,445,	0,1059,1580,1822,
#Deleted in new
chr17	42760804	42762698	chr17:42760804-42762698	0	+	42762416	42762698	789624	4	271,66,109,102,	0,1029,1550,1792,
#Deleted in new
chr17	42761193	42763036	chr17:42761193-42763036	3	+	42761261	42762852	0	4	165,66,109,440,	0,640,1161,1403,
#Deleted in new
chr17	42761257	42762854	chr17:42761257-42762854	1	+	42761261	42762852	0	4	101,66,124,258,	0,576,1082,1339,
#Deleted in new
chr17	42761257	42763002	chr17:42761257-42763002	1	+	42761261	42762772	789624	3	101,66,406,	0,576,1339,
#Partially deleted in new
chr17	42773435	42779599	chr17:42773435-42779599	3	+	42773475	42779069	0	6	93,146,54,89,76,643,	0,297,1210,1945,2809,5521,
#Partially deleted in new
chr17	42773457	42774328	chr17:42773457-42774328	0	+	42773457	42773457	8553170	2	71,596,	0,275,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	42773463	42775348	chr17:42773463-42775348	0	+	42773463	42773463	8553170	3	65,146,703,	0,269,1182,
#Partially deleted in new
chr17	42773468	42776320	chr17:42773468-42776320	0	+	42773475	42774250	789624	6	60,244,80,54,89,76,	0,264,779,1177,1912,2776,
#Partially deleted in new
chr17	42773479	42779006	chr17:42773479-42779006	0	+	42773823	42779006	789624	5	399,54,89,76,50,	0,1166,1901,2765,5477,
#Partially deleted in new
chr17	42773507	42779374	chr17:42773507-42779374	0	+	42773507	42779069	789624	4	21,146,54,418,	0,225,1138,5449,
#Partially deleted in new
chr17	42780677	42796936	chr17:42780677-42796936	3	+	42780698	42796688	0	19	639,173,221,158,89,217,265,122,59,118,117,138,55,611,61,409,200,98,251,	0,2080,3259,3744,4419,4588,6600,7100,7452,7612,8003,12914,13936,14094,14783,14947,15445,15803,16008,
#Partially deleted in new
chr17	42780680	42796936	chr17:42780680-42796936	0	+	42780698	42787300	789624	18	636,173,221,158,217,265,122,59,118,117,138,55,611,61,409,200,98,251,	0,2077,3256,3741,4585,6597,7097,7449,7609,8000,12911,13933,14091,14780,14944,15442,15800,16005,
#Deleted in new
chr17	42783608	42784453	chr17:42783608-42784453	0	+	42783608	42783608	8553170	2	549,32,	0,813,
#Partially deleted in new
chr17	42785326	42788395	chr17:42785326-42788395	0	+	42785326	42785326	8553170	4	156,265,59,106,	0,1951,2803,2963,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	42785326	42794489	chr17:42785326-42794489	0	+	42785326	42785326	8553170	6	156,265,59,118,117,898,	0,1951,2803,2963,3354,8265,
#Partially deleted in new
chr17	42793714	42795742	chr17:42793714-42795742	0	+	42793714	42795742	789624	3	15,55,118,	0,899,1910,
#Partially deleted in new
chr17	42795146	42798690	chr17:42795146-42798690	0	-	42796762	42798681	789624	3	1007,144,223,	0,1474,3321,
#Partially deleted in new
chr17	42797633	42798704	chr17:42797633-42798704	3	-	42798060	42798681	789624	2	534,237,	0,834,
#Partially deleted in new
chr17	42798791	42810635	chr17:42798791-42810635	3	+	42799067	42809535	789624	7	445,76,172,163,145,97,1271,	0,4828,5433,6930,7882,8976,10573,
#Partially deleted in new
chr17	42798799	42806778	chr17:42798799-42806778	0	+	42798817	42806778	789624	5	31,76,172,163,105,	0,4820,5425,6922,7874,
#Partially deleted in new
chr17	42798853	42807808	chr17:42798853-42807808	0	+	42799067	42804235	789624	5	383,172,163,145,41,	0,5371,6868,7820,8914,
#Partially deleted in new
chr17	42798869	42804396	chr17:42798869-42804396	0	+	42798869	42798869	8553170	3	315,76,172,	0,4750,5355,
#Partially deleted in new
chr17	42798886	42809887	chr17:42798886-42809887	1	+	42804228	42809535	789624	7	132,76,172,163,145,97,523,	0,4733,5338,6835,7787,8881,10478,
#Partially deleted in new
chr17	42805403	42811587	chr17:42805403-42811587	0	+	42805403	42805403	8553170	5	29,163,145,97,2223,	0,318,1270,2364,3961,
#Partially deleted in new
chr17	42805865	42809579	chr17:42805865-42809579	0	+	42805865	42809417	789624	4	19,145,125,215,	0,808,1902,3499,
#Partially deleted in new
chr17	42810133	42824263	chr17:42810133-42824263	3	-	42810759	42823877	0	12	795,143,61,150,147,195,137,91,62,68,132,131,	0,1521,3814,4390,5774,8087,8410,8653,9414,10640,13614,13999,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	42810133	42824278	chr17:42810133-42824278	0	-	42810133	42810133	8553170	9	795,1212,1126,147,195,1066,68,132,124,	0,1521,3414,5774,8087,8410,10640,13614,14021,
#Partially deleted in new
chr17	42810136	42824263	chr17:42810136-42824263	1	-	42810759	42823877	0	12	792,143,61,150,147,195,137,91,62,68,132,109,	0,1518,3811,4387,5771,8084,8407,8650,9411,10637,13611,14018,
#Partially deleted in new
chr17	42810287	42814593	chr17:42810287-42814593	0	-	42810812	42814593	789624	3	641,143,70,	0,1367,4236,
#Partially deleted in new
chr17	42810307	42824287	chr17:42810307-42824287	1	-	42810901	42823877	789624	9	621,61,150,147,195,62,68,132,133,	0,3640,4216,5600,7913,9240,10466,13440,13847,
#Partially deleted in new
chr17	42810309	42814673	chr17:42810309-42814673	0	-	42810759	42814673	789624	2	619,150,	0,4214,
#Partially deleted in new
chr17	42810413	42824287	chr17:42810413-42824287	0	-	42810413	42810413	8553170	11	515,143,61,150,147,195,137,823,68,132,133,	0,1241,3534,4110,5494,7807,8130,8373,10360,13334,13741,
#Partially deleted in new
chr17	42810669	42818578	chr17:42810669-42818578	0	-	42810759	42818578	789624	3	259,195,35,	0,7551,7874,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	42810715	42813989	chr17:42810715-42813989	0	-	42812230	42813989	789624	4	213,143,126,42,	0,939,1515,3232,
#Deleted in new
chr17	42810779	42812086	chr17:42810779-42812086	0	-	42810779	42810779	8553170	2	149,432,	0,875,
#Partially deleted in new
chr17	42810859	42818652	chr17:42810859-42818652	0	-	42810901	42818652	789624	6	69,61,150,147,195,109,	0,3088,3664,5048,7361,7684,
#Partially deleted in new
chr17	42811723	42815995	chr17:42811723-42815995	0	-	42811723	42811723	8553170	5	74,61,150,102,88,	0,2224,2800,3947,4184,
#Deleted in new
chr17	42813902	42815014	chr17:42813902-42815014	0	-	42813902	42813902	8553170	2	106,491,	0,621,
#Deleted in new
chr17	42814167	42815971	chr17:42814167-42815971	0	-	42814519	42815971	789624	2	506,64,	0,1740,
#Partially deleted in new
chr17	42814598	42824251	chr17:42814598-42824251	0	-	42814598	42823877	789624	6	75,195,62,68,132,97,	0,3622,4949,6175,9149,9556,
#Partially deleted in new
chr17	42815669	42818682	chr17:42815669-42818682	0	-	42815669	42815669	8553170	3	385,195,139,	0,2551,2874,
#Partially deleted in new
chr17	42818650	42824287	chr17:42818650-42824287	0	-	42820783	42823877	789624	6	30,91,62,68,175,133,	0,136,897,2123,5054,5504,
#Partially deleted in new
chr17	42819323	42824282	chr17:42819323-42824282	0	-	42819323	42819323	8553170	4	286,68,132,150,	0,1450,4424,4809,
#Partially deleted in new
chr17	42820350	42824253	chr17:42820350-42824253	0	-	42820350	42820350	8553170	3	491,132,121,	0,3397,3782,
#Partially deleted in new
chr17	42820522	42824260	chr17:42820522-42824260	0	-	42820522	42820522	8553170	3	319,132,106,	0,3225,3632,
#Partially deleted in new
chr17	42820793	42833350	chr17:42820793-42833350	0	-	42820793	42823877	789624	5	48,132,57,91,233,	0,2954,4382,6457,12324,
#Partially deleted in new
chr17	42823817	42833332	chr17:42823817-42833332	0	-	42823817	42823877	789624	4	62,225,57,215,	0,337,1358,9300,
#Deleted in new
chr17	42823879	42823943	chr17:42823879-42823943	3	-	42823879	42823879	5263520	1	64,	0,
#Partially deleted in new
chr17	42824384	42833026	chr17:42824384-42833026	0	+	42824384	42824384	8553170	5	30,101,111,152,12,	0,1373,2586,2813,8630,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	42824425	42843239	chr17:42824425-42843239	1	+	42834816	42841578	789624	13	445,101,152,33,63,105,49,113,69,68,55,87,1742,	0,1332,2772,9918,10089,10346,13223,13667,14305,14519,14686,14868,17072,
#Partially deleted in new
chr17	42833141	42843758	chr17:42833141-42843758	1	+	42833631	42841578	789624	10	532,33,63,105,49,113,68,55,87,2261,	0,1202,1373,1630,4507,4951,5803,5970,6152,8356,
#Partially deleted in new
chr17	42833141	42843758	chr17:42833141-42843758	1	+	42833631	42841578	789624	9	532,33,63,33,51,68,55,87,2261,	0,1202,1373,1630,5607,5803,5970,6152,8356,
#Partially deleted in new
chr17	42833398	42838985	chr17:42833398-42838985	0	+	42834816	42838985	789624	8	107,33,63,105,49,113,69,41,	0,945,1116,1373,4250,4694,5332,5546,
#Partially deleted in new
chr17	42833398	42841578	chr17:42833398-42841578	3	+	42833631	42841578	789624	11	275,33,63,105,49,113,69,68,55,87,81,	0,945,1116,1373,4250,4694,5332,5546,5713,5895,8099,
#Partially deleted in new
chr17	42833410	42838798	chr17:42833410-42838798	0	+	42834816	42838798	789624	6	966,63,105,49,113,68,	0,1104,1361,4238,4682,5320,
#Partially deleted in new
chr17	42833417	42843216	chr17:42833417-42843216	1	+	42834181	42841578	789624	13	256,164,163,33,63,105,49,113,69,68,55,87,1719,	0,358,676,926,1097,1354,4231,4675,5313,5527,5694,5876,8080,
#Deleted in new
chr17	42833417	42834804	chr17:42833417-42834804	0	+	42833417	42833417	8553170	5	256,164,33,63,33,	0,358,926,1097,1354,
#Partially deleted in new
chr17	42833418	42839009	chr17:42833418-42839009	0	+	42834816	42839009	789624	8	521,33,63,105,49,113,69,65,	0,925,1096,1353,4230,4674,5312,5526,
#Partially deleted in new
chr17	42833436	42839303	chr17:42833436-42839303	0	+	42833631	42839303	789624	9	237,33,63,105,49,113,68,55,10,	0,907,1078,1335,4212,4656,5508,5675,5857,
#Partially deleted in new
chr17	42833444	42841695	chr17:42833444-42841695	0	+	42833631	42838976	789624	10	229,33,63,105,49,69,68,55,87,198,	0,899,1070,1327,4204,5286,5500,5667,5849,8053,
#Partially deleted in new
chr17	42833444	42837755	chr17:42833444-42837755	0	+	42833444	42833444	8553170	5	229,33,63,105,107,	0,899,1070,1327,4204,
#Partially deleted in new
chr17	42833470	42843757	chr17:42833470-42843757	1	+	42833631	42841578	789624	11	203,33,63,105,49,113,108,68,55,87,2260,	0,873,1044,1301,4178,4622,5221,5474,5641,5823,8027,
#Partially deleted in new
chr17	42833495	42841671	chr17:42833495-42841671	1	+	42833631	42841578	789624	9	178,33,49,113,69,68,55,87,174,	0,848,4153,4597,5235,5449,5616,5798,8002,
#Partially deleted in new
chr17	42833548	42838976	chr17:42833548-42838976	0	+	42833631	42834180	789624	9	125,163,33,63,105,49,113,69,32,	0,545,795,966,1223,4100,4544,5182,5396,
#Partially deleted in new
chr17	42834541	42839124	chr17:42834541-42839124	0	+	42834541	42834541	8553170	6	36,105,49,113,69,180,	0,230,3107,3551,4189,4403,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	42844599	42850707	chr17:42844599-42850707	3	+	42844626	42850348	789624	4	1615,286,130,626,	0,4486,5001,5482,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	42844600	42850704	chr17:42844600-42850704	1	+	42844626	42850348	789624	4	1614,205,130,623,	0,4485,5000,5481,
#Partially deleted in new
chr17	42851183	42858124	chr17:42851183-42858124	3	+	42851343	42856550	0	4	1760,286,130,1850,	0,3264,4260,5091,
#Partially deleted in new
chr17	42851183	42858128	chr17:42851183-42858128	1	+	42851343	42856293	0	3	1760,286,1854,	0,3264,5091,
#Partially deleted in new
chr17	42852752	42856301	chr17:42852752-42856301	0	+	42852752	42855488	789624	4	191,197,130,27,	0,1784,2691,3522,
#Partially deleted in new
chr17	42853242	42858128	chr17:42853242-42858128	1	+	42854476	42856550	0	4	122,286,130,1854,	0,1205,2201,3032,
#Partially deleted in new
chr17	42853276	42856343	chr17:42853276-42856343	0	+	42854476	42856343	789624	4	88,286,130,69,	0,1171,2167,2998,
#Partially deleted in new
chr17	42854077	42858130	chr17:42854077-42858130	1	+	42854476	42856550	0	4	78,458,130,1856,	0,198,1366,2197,
#Partially deleted in new
chr17	42854126	42855522	chr17:42854126-42855522	0	+	42854476	42855522	789624	3	177,286,79,	0,321,1317,
#Deleted in new
chr17	42865921	42867706	chr17:42865921-42867706	5	+	42865921	42865921	16724991	2	274,291,	0,1494,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	42867144	42869217	chr17:42867144-42869217	4	+	42867144	42867144	16724991	1	2073,	0,
#Partially deleted in new
chr17	42867278	42874369	chr17:42867278-42874369	7	+	42867278	42867278	16724991	4	1597,286,130,276,	0,5126,6114,6815,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	42867546	42869347	chr17:42867546-42869347	4	+	42867546	42867546	16724991	2	618,770,	0,1031,
#Partially deleted in new
chr17	42868490	42873464	chr17:42868490-42873464	4	+	42868490	42868490	16724991	3	385,286,72,	0,3914,4902,
#Partially deleted in new
chr17	42868749	42874246	chr17:42868749-42874246	4	+	42868749	42868749	16724991	2	126,153,	0,5344,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	42874669	42898704	chr17:42874669-42898704	3	-	42874669	42874669	8553170	6	194,99,1292,69,232,72,	0,3305,3857,19896,23017,23963,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	42879487	42898700	chr17:42879487-42898700	0	-	42879487	42879487	8553170	4	331,92,69,68,	0,5107,15078,19145,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	42879589	42898704	chr17:42879589-42898704	0	-	42879589	42879589	8553170	5	229,92,69,117,72,	0,5005,14976,15787,19043,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	42891337	42891435	chr17:42891337-42891435	3	-	42891337	42891337	8553170	1	98,	0,
#Partially deleted in new
chr17	42900796	42911336	chr17:42900796-42911336	1	+	42900876	42910960	789624	5	310,110,29,116,422,	0,3134,6803,8506,10118,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	42900797	42913369	chr17:42900797-42913369	3	+	42900876	42911426	789624	5	309,110,106,116,2455,	0,3133,6725,8505,10117,
#Partially deleted in new
chr17	42900799	42911488	chr17:42900799-42911488	1	+	42900876	42910960	789624	4	307,110,106,574,	0,3131,6723,10115,
#Partially deleted in new
chr17	42900811	42904239	chr17:42900811-42904239	0	+	42900811	42900811	8553170	2	295,309,	0,3119,
#Partially deleted in new
chr17	42940574	42940702	chr17:42940574-42940702	3	-	42940574	42940574	8553170	1	128,	0,
#Partially deleted in new
chr17	42950525	42980003	chr17:42950525-42980003	1	-	42950592	42979617	789624	17	203,95,55,92,67,131,117,157,58,160,132,54,90,99,67,114,99,	0,1274,3198,4350,4632,5316,5678,5878,6612,10666,13580,19763,21081,28644,28852,29024,29379,
#Partially deleted in new
chr17	42950525	42955261	chr17:42950525-42955261	0	-	42950525	42950525	8553170	3	203,92,104,	0,4350,4632,
#Partially deleted in new
chr17	42950525	42952135	chr17:42950525-42952135	0	-	42950525	42950525	8553170	2	203,336,	0,1274,
#Partially deleted in new
chr17	42950525	42955946	chr17:42950525-42955946	0	-	42951875	42955946	789624	5	203,95,92,67,105,	0,1274,4350,4632,5316,
#Partially deleted in new
chr17	42950525	42955034	chr17:42950525-42955034	0	-	42950525	42950525	8553170	3	203,95,159,	0,1274,4350,
#Partially deleted in new
chr17	42950525	42954076	chr17:42950525-42954076	0	-	42950525	42950525	8553170	3	203,95,353,	0,1274,3198,
#Partially deleted in new
chr17	42950529	42980490	chr17:42950529-42980490	1	-	42950592	42980182	789624	18	199,95,55,92,67,131,117,157,58,160,132,54,90,99,67,114,230,125,	0,1270,3194,4346,4628,5312,5674,5874,6608,10662,13576,19759,21077,28640,28848,29020,29516,29836,
#Partially deleted in new
chr17	42950532	42955345	chr17:42950532-42955345	0	-	42950532	42950532	8553170	5	196,94,55,92,188,	0,1268,3191,4343,4625,
#Partially deleted in new
chr17	42950545	42979993	chr17:42950545-42979993	1	-	42950592	42979617	789624	16	183,95,55,92,67,131,117,157,58,160,132,54,99,67,114,89,	0,1254,3178,4330,4612,5296,5658,5858,6592,10646,13560,19743,28624,28832,29004,29359,
#Partially deleted in new
chr17	42950545	42964476	chr17:42950545-42964476	3	-	42950592	42964440	789624	12	183,95,55,92,67,131,117,157,58,160,132,75,	0,1254,3178,4330,4612,5296,5658,5858,6592,10646,13560,13856,
#Partially deleted in new
chr17	42950549	42980528	chr17:42950549-42980528	3	-	42950592	42980182	789624	17	179,95,55,92,67,131,117,157,58,160,132,54,90,99,67,114,483,	0,1250,3174,4326,4608,5292,5654,5854,6588,10642,13556,19739,21057,28620,28828,29000,29496,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	42954848	42955456	chr17:42954848-42955456	0	-	42954848	42954848	8553170	2	119,299,	0,309,
#Partially deleted in new
chr17	42954950	42980138	chr17:42954950-42980138	0	-	42956495	42980138	789624	7	17,67,131,117,101,58,93,	0,207,891,1253,1453,24677,25095,
#Partially deleted in new
chr17	42955089	42956525	chr17:42955089-42956525	0	-	42955089	42955089	8553170	4	278,131,117,122,	0,752,1114,1314,
#Partially deleted in new
chr17	42955273	42956539	chr17:42955273-42956539	0	-	42955273	42955273	8553170	3	94,131,336,	0,568,930,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	42955438	42956514	chr17:42955438-42956514	0	-	42955438	42955438	8553170	3	534,117,111,	0,765,965,
#Partially deleted in new
chr17	42955854	42964482	chr17:42955854-42964482	0	-	42956297	42961207	789624	7	118,112,163,58,160,132,40,	0,349,543,1283,5337,8251,8588,
#Partially deleted in new
chr17	42955886	42964443	chr17:42955886-42964443	0	-	42955886	42955886	8553170	6	434,157,58,160,132,42,	0,517,1251,5305,8219,8515,
#Partially deleted in new
chr17	42955900	42964498	chr17:42955900-42964498	0	-	42955900	42961207	789624	7	72,117,157,58,160,132,56,	0,303,503,1237,5291,8205,8542,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	42956027	42957532	chr17:42956027-42957532	0	-	42956027	42956027	8553170	2	533,395,	0,1110,
#Partially deleted in new
chr17	42956413	42964479	chr17:42956413-42964479	0	-	42956413	42956413	8553170	5	91,58,160,132,37,	0,724,4778,7692,8029,
#Partially deleted in new
chr17	42960941	42964466	chr17:42960941-42964466	0	-	42960941	42960941	8553170	3	410,132,24,	0,3164,3501,
#Partially deleted in new
chr17	42961263	42979663	chr17:42961263-42979663	0	-	42961263	42979663	789624	7	88,132,54,90,99,67,36,	0,2842,9025,10343,17906,18114,18364,
#Partially deleted in new
chr17	42964218	42980086	chr17:42964218-42980086	0	-	42964218	42979617	789624	7	19,54,90,99,67,224,41,	0,6070,7388,14951,15159,15331,15827,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	42968087	42979664	chr17:42968087-42979664	0	-	42969147	42979664	789624	6	1099,54,90,99,67,37,	0,2201,3519,11082,11290,11540,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	42968103	42980433	chr17:42968103-42980433	3	-	42969147	42980182	789624	6	1083,54,90,99,67,388,	0,2185,3503,11066,11274,11942,
#Partially deleted in new
chr17	42968725	42980349	chr17:42968725-42980349	0	-	42968725	42968725	8553170	5	461,54,90,99,972,	0,1563,2881,10444,10652,
#Partially deleted in new
chr17	42968786	42980076	chr17:42968786-42980076	0	-	42969147	42980076	789624	7	400,54,90,99,67,114,31,	0,1502,2820,10383,10591,10763,11259,
#Partially deleted in new
chr17	42968989	42980080	chr17:42968989-42980080	0	-	42969147	42980080	789624	6	197,54,90,67,114,35,	0,1299,2617,10388,10560,11056,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	42969040	42972154	chr17:42969040-42972154	0	-	42969040	42969040	8553170	3	146,54,548,	0,1248,2566,
#Duplicated in new
chr17	42980564	42993690	chr17:42980564-42993690	3	+	42980576	42991716	789624	5	510,159,199,120,2840,	0,6691,8776,9752,10286,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	42980564	42982003	chr17:42980564-42982003	0	+	42980564	42980564	8553170	1	1439,	0,
#Partially deleted in new
chr17	42980580	42991036	chr17:42980580-42991036	0	+	42980580	42990868	789624	4	494,159,120,186,	0,6675,9736,10270,
#Partially deleted in new
chr17	42998272	43002949	chr17:42998272-43002949	3	+	42998750	43002920	0	5	143,83,170,111,78,	0,476,1660,4400,4599,
#Partially deleted in new
chr17	42998418	43002959	chr17:42998418-43002959	1	+	42998750	43002920	0	5	53,83,170,111,88,	0,330,1514,4254,4453,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	42998418	42999279	chr17:42998418-42999279	0	+	42998418	42998418	8553170	2	53,531,	0,330,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	42998418	43002948	chr17:42998418-43002948	0	+	42998418	42998418	8553170	3	1684,111,77,	0,4254,4453,
#Partially deleted in new
chr17	42998435	43002959	chr17:42998435-43002959	0	+	42998750	43002714	789624	4	36,83,111,88,	0,313,4237,4436,
#Partially deleted in new
chr17	42998470	43002959	chr17:42998470-43002959	1	+	42998750	43002920	0	4	361,170,111,88,	0,1462,4202,4401,
#Partially deleted in new
chr17	42998808	43002946	chr17:42998808-43002946	0	+	42998808	43002920	789624	4	104,170,111,75,	0,1124,3864,4063,
#Partially deleted in new
chr17	43006724	43014456	chr17:43006724-43014456	1	+	43006947	43014299	789624	7	244,99,148,107,187,107,349,	0,5454,6322,6542,6751,7051,7383,
#Partially deleted in new
chr17	43006739	43014456	chr17:43006739-43014456	3	+	43006947	43014299	789624	7	229,99,148,113,187,107,349,	0,5439,6307,6527,6736,7036,7368,
#Partially deleted in new
chr17	43006784	43013582	chr17:43006784-43013582	0	+	43006784	43006784	8553170	4	184,99,148,316,	0,5394,6262,6482,
#Partially deleted in new
chr17	43006787	43013044	chr17:43006787-43013044	0	+	43006787	43006787	8553170	3	181,99,103,	0,5391,6154,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	43006807	43012612	chr17:43006807-43012612	0	+	43006807	43006807	8553170	2	161,434,	0,5371,
#Partially deleted in new
chr17	43012060	43013364	chr17:43012060-43013364	0	+	43012060	43012060	8553170	3	217,148,98,	0,986,1206,
#Deleted in new
chr17	43012949	43013648	chr17:43012949-43013648	0	+	43012949	43012949	8553170	3	245,107,173,	0,317,526,
#Deleted in new
chr17	43013177	43013659	chr17:43013177-43013659	0	+	43013177	43013177	8553170	2	202,184,	0,298,
#Partially deleted in new
chr17	43014604	43022418	chr17:43014604-43022418	3	-	43016060	43022322	789624	6	1540,242,90,171,208,483,	0,1702,3236,3431,3987,7331,
#Deleted in new
chr17	43014606	43016313	chr17:43014606-43016313	0	-	43016060	43016313	789624	3	267,204,7,	0,1334,1700,
#Partially deleted in new
chr17	43015898	43022356	chr17:43015898-43022356	1	-	43016060	43022322	789624	6	246,242,90,171,208,217,	0,408,1942,2137,2693,6241,
#Partially deleted in new
chr17	43015917	43020273	chr17:43015917-43020273	1	-	43016060	43018784	789624	6	227,242,90,171,208,131,	0,389,1923,2118,2674,4225,
#Partially deleted in new
chr17	43016066	43018045	chr17:43016066-43018045	0	-	43016270	43018045	789624	3	482,90,10,	0,1774,1969,
#Partially deleted in new
chr17	43017831	43025123	chr17:43017831-43025123	0	-	43017831	43018784	789624	4	99,171,208,135,	0,204,760,7157,
#Partially deleted in new
chr17	43017841	43019555	chr17:43017841-43019555	0	-	43017841	43018784	789624	4	89,171,208,102,	0,194,750,1612,
#Partially deleted in new
chr17	43018121	43019027	chr17:43018121-43019027	0	-	43018121	43018784	789624	2	85,436,	0,470,
#Partially deleted in new
chr17	43018748	43025122	chr17:43018748-43025122	0	-	43018748	43022322	789624	3	51,415,134,	0,3187,6240,
#Deleted in new
chr17	43025240	43026253	chr17:43025240-43026253	0	+	43025240	43025240	8553170	2	209,294,	0,719,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	43025240	43032036	chr17:43025240-43032036	3	+	43025347	43028680	789624	5	209,88,110,135,3605,	0,719,1942,2820,3191,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr17	43044294	43125370	chr17:43044294-43125370	1	-	43045677	43124096	0	22	1508,61,74,55,84,41,78,88,311,191,127,172,89,77,46,106,140,89,78,54,99,100,	0,3348,4826,6768,12757,19038,19579,23313,26633,30036,32193,38109,46649,51551,52949,55480,59827,60573,62161,71431,79722,80976,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr17	43044294	43125483	chr17:43044294-43125483	1	-	43045677	43124096	0	23	1508,61,74,55,84,41,78,88,311,191,127,172,89,3426,77,46,106,140,89,78,54,99,213,	0,3348,4826,6768,12757,19038,19579,23313,26633,30036,32193,38109,46649,47140,51551,52949,55480,59827,60573,62161,71431,79722,80976,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr17	43044294	43125483	chr17:43044294-43125483	3	-	43045677	43124096	0	24	1508,61,74,55,84,41,78,88,311,191,124,66,172,89,3426,77,46,106,140,89,78,54,99,213,	0,3348,4826,6768,12757,19038,19579,23313,26633,30036,32193,35039,38109,46649,47140,51551,52949,55480,59827,60573,62161,71431,79722,80976,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr17	43044804	43125451	chr17:43044804-43125451	1	-	43045783	43124096	0	22	998,61,55,84,41,78,88,311,191,124,172,89,117,77,46,106,140,89,78,54,99,175,	0,2838,6258,12247,18528,19069,22803,26123,29526,31683,37599,46139,49939,51041,52439,54970,59317,60063,61651,70921,79212,80472,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	43045085	43091851	chr17:43045085-43091851	0	-	43045677	43091851	789624	15	717,61,74,55,84,41,78,88,311,191,127,66,172,89,417,	0,2557,4035,5977,11966,18247,18788,22522,25842,29245,31402,34248,37318,45858,46349,
#Partially deleted in new
chr17	43045562	43125329	chr17:43045562-43125329	1	-	43045677	43125185	789624	8	240,61,74,55,84,41,78,148,	0,2080,3558,5500,11489,17770,18311,79619,
#Partially deleted in new
chr17	43045562	43125329	chr17:43045562-43125329	1	-	43045677	43074478	789624	11	240,61,74,55,84,41,78,88,311,191,59,	0,2080,3558,5500,11489,17770,18311,22045,25365,28768,79708,
#Partially deleted in new
chr17	43045562	43125329	chr17:43045562-43125329	1	-	43045677	43050092	789624	5	240,61,74,129,59,	0,2080,3558,4499,79708,
#Partially deleted in new
chr17	43045628	43125402	chr17:43045628-43125402	1	-	43045677	43106526	0	22	174,61,74,55,84,41,78,88,311,191,127,172,89,3426,77,46,106,140,89,78,99,126,	0,2014,3492,5434,11423,17704,18245,21979,25299,28702,30859,36775,45315,45806,50217,51615,54146,58493,59239,60827,78388,79648,
#Partially deleted in new
chr17	43045677	43125288	chr17:43045677-43125288	0	-	43104954	43124096	0	23	125,61,74,55,84,41,78,88,311,191,127,172,89,3426,77,46,103,140,89,56,54,99,107,	0,1965,3443,5385,11374,17655,18196,21930,25250,28653,30810,36726,45266,45757,50168,51566,54097,58444,59190,60800,70048,78339,79504,
#Partially deleted in new
chr17	43045677	43125356	chr17:43045677-43125356	1	-	43045677	43124096	0	23	125,61,74,55,84,41,78,88,311,191,124,172,89,117,77,46,106,140,89,78,54,99,80,	0,1965,3443,5385,11374,17655,18196,21930,25250,28653,30810,36726,45266,49066,50168,51566,54097,58444,59190,60778,70048,78339,79599,
#Partially deleted in new
chr17	43063343	43125359	chr17:43063343-43125359	0	-	43063343	43124096	789624	18	30,78,88,311,191,127,172,89,117,77,46,103,140,89,78,54,99,83,	0,530,4264,7584,10987,13144,19060,27600,31400,32502,33900,36431,40778,41524,43112,52382,60673,61933,
#Partially deleted in new
chr17	43063343	43104916	chr17:43063343-43104916	0	-	43063343	43104916	789624	12	30,78,88,311,191,127,172,89,117,103,140,49,	0,530,4264,7584,10987,13144,19060,27600,31400,36431,40778,41524,
#Partially deleted in new
chr17	43063359	43125402	chr17:43063359-43125402	0	-	43063359	43106526	789624	17	14,78,88,311,191,127,172,89,117,77,46,106,140,89,78,99,126,	0,514,4248,7568,10971,13128,19044,27584,31384,32486,33884,36415,40762,41508,43096,60657,61917,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	43067273	43071066	chr17:43067273-43071066	0	-	43067273	43067273	8553170	2	422,139,	0,3654,
#Partially deleted in new
chr17	43076487	43104916	chr17:43076487-43104916	0	-	43076487	43104916	789624	7	127,172,89,117,106,140,49,	0,5916,14456,18256,23287,27634,28380,
#Partially deleted in new
chr17	43076487	43082760	chr17:43076487-43082760	0	-	43076487	43076487	8553170	3	124,172,79,	0,5916,6194,
#Partially deleted in new
chr17	43076536	43091824	chr17:43076536-43091824	0	-	43076536	43091824	789624	4	75,172,89,390,	0,5867,14407,14898,
#Deleted in new
chr17	43079301	43079780	chr17:43079301-43079780	7	+	43079301	43079301	16724991	1	479,	0,
#Partially deleted in new
chr17	43091097	43125315	chr17:43091097-43125315	1	-	43091330	43124096	789624	10	3763,77,46,106,140,89,78,54,99,45,	0,4748,6146,8677,13024,13770,15358,24628,32919,34173,
#Partially deleted in new
chr17	43093012	43170245	chr17:43093012-43170245	0	-	43093012	43124096	789624	8	1848,106,140,89,78,54,99,120,	0,6762,11109,11855,13443,22713,31004,77113,
#Partially deleted in new
chr17	43093569	43095866	chr17:43093569-43095866	0	-	43093569	43095866	789624	2	1291,21,	0,2276,
#Partially deleted in new
chr17	43093583	43125323	chr17:43093583-43125323	0	-	43093583	43124096	789624	10	1277,77,46,106,140,89,78,54,99,142,	0,2262,3660,6191,10538,11284,12872,22142,30433,31598,
#Partially deleted in new
chr17	43093585	43125364	chr17:43093585-43125364	0	-	43093585	43124096	789624	9	1275,77,46,106,140,89,54,99,94,	0,2260,3658,6189,10536,11282,22140,30431,31685,
#Partially deleted in new
chr17	43094111	43125450	chr17:43094111-43125450	0	-	43094111	43124096	789624	10	749,77,46,106,140,89,78,54,99,174,	0,1734,3132,5663,10010,10756,12344,21614,29905,31165,
#Partially deleted in new
chr17	43094111	43125300	chr17:43094111-43125300	0	-	43094111	43094642	789624	2	749,30,	0,31159,
#Partially deleted in new
chr17	43094169	43104891	chr17:43094169-43104891	0	-	43094169	43104891	789624	4	691,103,140,24,	0,5605,9952,10698,
#Partially deleted in new
chr17	43095845	43125353	chr17:43095845-43125353	0	-	43095845	43124096	789624	9	77,46,103,140,89,78,54,99,83,	0,1398,3929,8276,9022,10610,19880,28171,29425,
#Partially deleted in new
chr17	43099830	43125370	chr17:43099830-43125370	0	-	43104954	43124096	0	7	50,140,89,56,54,99,94,	0,4291,5037,6647,15895,24186,25446,
#Partially deleted in new
chr17	43104188	43125321	chr17:43104188-43125321	0	-	43104188	43124096	789624	5	73,89,54,99,140,	0,679,11537,19828,20993,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	43104224	43125326	chr17:43104224-43125326	0	-	43104224	43106526	789624	7	37,89,78,54,145,99,56,	0,643,2231,11501,14896,19792,21046,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	43124025	43125364	chr17:43124025-43125364	0	-	43124025	43124096	789624	2	90,628,	0,711,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	43125609	43145113	chr17:43125609-43145113	3	+	43125609	43125609	789624	5	161,63,266,468,386,	0,5598,13047,14206,19118,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	43125639	43140333	chr17:43125639-43140333	0	+	43125639	43125639	8553170	4	131,63,266,518,	0,5568,13017,14176,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	43125643	43153671	chr17:43125643-43153671	0	+	43125643	43125643	789624	8	127,63,125,182,205,266,120,70,	0,5564,6955,7312,12512,13013,16813,27958,
#Deleted in new
chr17	43131207	43131270	chr17:43131207-43131270	7	+	43131207	43131207	16724991	1	63,	0,
#Partially deleted in new
chr17	43144955	43145255	chr17:43144955-43145255	7	+	43144955	43144955	16724991	1	300,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	43148367	43170316	chr17:43148367-43170316	3	-	43148367	43148367	8553170	4	416,305,870,191,	0,11055,18612,21758,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	43160085	43171036	chr17:43160085-43171036	1	-	43160085	43160085	8553170	4	4727,271,116,911,	0,6894,7648,10040,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	43160289	43170403	chr17:43160289-43170403	0	-	43160289	43160289	8553170	3	4523,283,278,	0,6690,9836,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	43165759	43170441	chr17:43165759-43170441	0	-	43165759	43165759	8553170	2	2090,316,	0,4366,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	43166177	43171037	chr17:43166177-43171037	0	-	43166177	43166177	8553170	2	1073,912,	0,3948,
#Deleted in new
chr17	43168169	43168249	chr17:43168169-43168249	7	-	43168169	43168169	16724991	1	80,	0,
#Deleted in new
chr17	43169879	43170077	chr17:43169879-43170077	7	-	43169879	43169879	16724991	1	198,	0,
#Partially deleted in new
chr17	43170480	43211689	chr17:43170480-43211689	3	+	43175799	43210074	0	21	131,111,63,19,23,195,78,215,168,210,160,291,150,76,111,165,442,95,58,106,1789,	0,5310,7455,8913,10314,15769,18561,19107,20128,20891,22613,22867,23869,24483,26000,26461,29686,31205,32174,33200,39420,
#Partially deleted in new
chr17	43170493	43177960	chr17:43170493-43177960	0	+	43175799	43177960	789624	3	450,111,25,	0,5297,7442,
#Partially deleted in new
chr17	43171201	43209993	chr17:43171201-43209993	1	+	43175799	43209914	789624	18	101,111,19,23,195,78,215,168,210,160,291,150,76,111,165,442,95,93,	0,4589,8192,9593,15048,17840,18386,19407,20170,21892,22146,23148,23762,25279,25740,28965,30484,38699,
#Partially deleted in new
chr17	43171213	43210521	chr17:43171213-43210521	1	+	43175799	43210074	0	21	89,111,63,19,23,195,78,215,168,210,160,291,150,76,111,165,442,95,58,106,621,	0,4577,6722,8180,9581,15036,17828,18374,19395,20158,21880,22134,23136,23750,25267,25728,28953,30472,31441,32467,38687,
#Partially deleted in new
chr17	43171224	43176676	chr17:43171224-43176676	0	+	43171224	43171224	8553170	2	78,886,	0,4566,
#Partially deleted in new
chr17	43171242	43209857	chr17:43171242-43209857	1	+	43175799	43209643	0	21	60,111,63,19,23,195,78,215,168,210,160,291,150,76,111,165,442,95,58,106,301,	0,4548,6693,8151,9552,15007,17799,18345,19366,20129,21851,22105,23107,23721,25238,25699,28924,30443,31412,32438,38314,
#Partially deleted in new
chr17	43177935	43177998	chr17:43177935-43177998	0	+	43177935	43177935	8553170	1	63,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	43189913	43196120	chr17:43189913-43196120	0	+	43189913	43189913	8553170	5	863,210,160,291,1771,	0,1458,3180,3434,4436,
#Partially deleted in new
chr17	43211834	43217736	chr17:43211834-43217736	0	+	43213041	43217736	789624	9	88,80,232,64,154,141,44,54,56,	0,480,1186,1993,3953,4614,4862,5424,5846,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	43211874	43218265	chr17:43211874-43218265	1	+	43213041	43217801	789624	7	48,232,64,154,44,54,585,	0,1146,1953,3913,4822,5384,5806,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	43211874	43218249	chr17:43211874-43218249	1	+	43213041	43217801	789624	10	48,168,25,63,64,154,141,44,54,569,	0,352,1146,1315,1953,3913,4574,4822,5384,5806,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	43211874	43218190	chr17:43211874-43218190	1	+	43213041	43217801	789624	9	48,190,232,64,154,141,44,54,510,	0,330,1146,1953,3913,4574,4822,5384,5806,
#Partially deleted in new
chr17	43211874	43213996	chr17:43211874-43213996	0	+	43211874	43211874	8553170	4	48,190,232,169,	0,330,1146,1953,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	43211874	43220041	chr17:43211874-43220041	3	+	43213041	43217801	789624	9	48,168,232,64,154,141,44,54,2361,	0,352,1146,1953,3913,4574,4822,5384,5806,
#Partially deleted in new
chr17	43211893	43216463	chr17:43211893-43216463	0	+	43211893	43211893	8553170	6	29,168,138,64,154,15,	0,333,1221,1934,3894,4555,
#Partially deleted in new
chr17	43213043	43216085	chr17:43213043-43216085	0	+	43213043	43213043	8553170	3	209,64,298,	0,784,2744,
#Partially deleted in new
chr17	43216940	43224523	chr17:43216940-43224523	0	-	43224201	43224523	789624	4	334,159,59,360,	0,4498,6615,7223,
#Partially deleted in new
chr17	43219055	43224464	chr17:43219055-43224464	0	-	43224201	43224464	789624	4	217,159,59,301,	0,2383,4500,5108,
#Partially deleted in new
chr17	43219163	43224461	chr17:43219163-43224461	0	-	43224201	43224461	789624	4	109,159,59,350,	0,2275,4392,4948,
#Partially deleted in new
chr17	43221416	43229011	chr17:43221416-43229011	0	-	43224201	43228515	789624	5	181,59,386,97,243,	0,2139,2747,7033,7352,
#Partially deleted in new
chr17	43221422	43224464	chr17:43221422-43224464	0	-	43224201	43224464	789624	4	175,59,95,301,	0,2133,2318,2741,
#Partially deleted in new
chr17	43221428	43303256	chr17:43221428-43303256	3	-	43221570	43303256	789624	4	169,59,316,105,	0,2127,2805,81723,
#Partially deleted in new
chr17	43221428	43224464	chr17:43221428-43224464	0	-	43224201	43224464	789624	4	169,59,95,353,	0,2127,2312,2683,
#Partially deleted in new
chr17	43221428	43224464	chr17:43221428-43224464	0	-	43224201	43224464	789624	3	169,59,353,	0,2127,2683,
#Partially deleted in new
chr17	43221428	43224464	chr17:43221428-43224464	0	-	43224201	43224464	789624	4	169,59,126,301,	0,2127,2472,2735,
#Partially deleted in new
chr17	43221428	43228623	chr17:43221428-43228623	1	-	43221570	43228554	789624	4	169,59,316,174,	0,2127,2805,7021,
#Partially deleted in new
chr17	43221429	43224464	chr17:43221429-43224464	0	-	43223605	43224464	789624	3	168,59,110,	0,2126,2925,
#Partially deleted in new
chr17	43221530	43224463	chr17:43221530-43224463	0	-	43221530	43221530	8553170	3	67,59,563,	0,2025,2370,
#Partially deleted in new
chr17	43224352	43228623	chr17:43224352-43228623	0	-	43224352	43224352	8553170	2	264,174,	0,4097,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	43224352	43230262	chr17:43224352-43230262	0	-	43224352	43228515	789624	3	197,97,97,	0,4097,5813,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	43224352	43305397	chr17:43224352-43305397	0	-	43224352	43228515	789624	4	197,97,50,530,	0,4097,4609,80515,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	43224442	43226347	chr17:43224442-43226347	0	-	43224442	43224442	8553170	2	513,192,	0,1713,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43233786	43233977	chr17:43233786-43233977	3	-	43233786	43233786	789624	1	191,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43239920	43240111	chr17:43239920-43240111	3	-	43239920	43239920	8553170	1	191,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43241179	43241370	chr17:43241179-43241370	3	-	43241179	43241179	8553170	1	191,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43245673	43245864	chr17:43245673-43245864	3	-	43245673	43245673	8553170	1	191,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43251828	43252019	chr17:43251828-43252019	3	-	43251828	43251828	8553170	1	191,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43266632	43266823	chr17:43266632-43266823	3	-	43266632	43266632	8553170	1	191,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43271368	43271559	chr17:43271368-43271559	3	-	43271368	43271368	8553170	1	191,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43273100	43273292	chr17:43273100-43273292	3	-	43273100	43273100	8553170	1	192,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43277977	43278168	chr17:43277977-43278168	3	-	43277977	43277977	8553170	1	191,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43284138	43284329	chr17:43284138-43284329	3	-	43284138	43284138	8553170	1	191,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43290290	43290481	chr17:43290290-43290481	3	-	43290290	43290290	8553170	1	191,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43296424	43296615	chr17:43296424-43296615	3	-	43296424	43296424	8553170	1	191,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43300040	43300231	chr17:43300040-43300231	3	-	43300040	43300040	8553170	1	191,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43360040	43361361	chr17:43360040-43361361	3	-	43360040	43360040	8553170	1	1321,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	43369844	43388545	chr17:43369844-43388545	3	-	43369844	43369844	789624	6	1195,180,143,140,388,257,	0,1402,7826,9278,11428,18444,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	43375927	43388312	chr17:43375927-43388312	1	-	43375927	43375927	789624	4	1886,140,388,24,	0,3195,5345,12361,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	43377206	43388335	chr17:43377206-43388335	0	-	43377206	43377206	8553170	3	607,388,47,	0,4066,11082,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	43385862	43389199	chr17:43385862-43389199	1	-	43385862	43385862	8553170	2	2195,695,	0,2642,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43387225	43387417	chr17:43387225-43387417	3	-	43387225	43387225	8553170	1	192,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43395992	43396091	chr17:43395992-43396091	3	-	43395992	43395992	8553170	1	99,	0,
#Partially deleted in new
chr17	43398958	43401137	chr17:43398958-43401137	3	+	43399732	43400338	789624	2	135,1477,	0,702,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43412426	43412530	chr17:43412426-43412530	3	+	43412426	43412426	8553170	1	104,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	43444706	43451200	chr17:43444706-43451200	3	+	43444706	43444706	789624	2	202,304,	0,6190,
#Deleted in new
chr17	43444805	43444885	chr17:43444805-43444885	3	+	43444805	43444805	5263520	1	80,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43445506	43445613	chr17:43445506-43445613	3	+	43445506	43445506	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43473584	43473690	chr17:43473584-43473690	3	+	43473584	43473584	8553170	1	106,	0,
#Deleted in new
chr17	43476197	43476665	chr17:43476197-43476665	7	+	43476197	43476197	16724991	1	468,	0,
#Partially deleted in new
chr17	43483864	43492292	chr17:43483864-43492292	0	+	43484037	43490404	789624	4	321,73,86,110,	0,6526,7300,8318,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr17	43483959	43590741	chr17:43483959-43590741	0	+	43484037	43523847	8553170	25	226,86,73,86,110,360,145,204,88,98,148,182,195,186,211,182,141,156,138,129,197,180,558,87,654,	0,5489,6431,7205,8223,8721,9485,9723,12221,14902,15996,20684,23043,23543,23849,24379,29402,33207,36170,36791,37409,38087,39668,52452,106128,
#Partially deleted in new
chr17	43483962	43526786	chr17:43483962-43526786	1	+	43484037	43526598	789624	23	223,86,73,86,110,360,145,204,88,98,148,182,195,186,211,182,141,156,138,129,197,180,291,	0,5486,6428,7202,8220,8718,9482,9720,12218,14899,15993,20681,23040,23540,23846,24376,29399,33204,36167,36788,37406,38084,42533,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr17	43483965	43525670	chr17:43483965-43525670	3	+	43484037	43523847	0	23	220,86,73,86,110,360,145,204,88,98,148,182,195,186,211,182,141,156,138,129,197,180,2043,	0,5483,6425,7199,8217,8715,9479,9717,12215,14896,15990,20678,23037,23537,23843,24373,29396,33201,36164,36785,37403,38081,39662,
#Partially deleted in new
chr17	43484139	43490493	chr17:43484139-43490493	0	+	43484139	43484139	8553170	3	46,86,103,	0,5309,6251,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr17	43491193	43526796	chr17:43491193-43526796	0	+	43491193	43491193	8553170	19	57,110,360,145,204,88,98,148,182,195,186,211,182,141,3101,129,197,180,301,	0,989,1487,2251,2489,4987,7668,8762,13450,15809,16309,16615,17145,22168,25973,29557,30175,30853,35302,
#Partially deleted in new
chr17	43521395	43544463	chr17:43521395-43544463	0	+	43521395	43536478	789624	4	170,180,87,302,	0,651,15016,22766,
#Partially deleted in new
chr17	43522151	43526803	chr17:43522151-43526803	0	+	43522151	43526411	789624	2	75,417,	0,4235,
#Partially deleted in new
chr17	43527843	43546432	chr17:43527843-43546432	3	-	43528518	43545617	0	13	900,102,173,69,75,266,162,127,54,48,94,111,248,	0,1291,1660,2040,2263,4830,5343,6015,8582,17131,17430,17714,18341,
#Partially deleted in new
chr17	43527843	43545937	chr17:43527843-43545937	1	-	43528518	43545310	0	12	900,102,173,69,75,266,162,127,54,48,94,77,	0,1291,1660,2040,2263,4830,5343,6015,8582,17131,17430,18017,
#Partially deleted in new
chr17	43527845	43545671	chr17:43527845-43545671	1	-	43528518	43545617	0	12	898,102,173,69,75,266,162,127,54,48,94,114,	0,1289,1658,2038,2261,4828,5341,6013,8580,17129,17428,17712,
#Partially deleted in new
chr17	43528277	43546323	chr17:43528277-43546323	1	-	43528518	43545310	0	12	466,102,173,69,75,266,162,127,54,48,94,139,	0,857,1226,1606,1829,4396,4909,5581,8148,16697,16996,17907,
#Partially deleted in new
chr17	43528279	43545713	chr17:43528279-43545713	1	-	43528518	43545617	789624	11	464,102,173,69,75,266,127,54,48,94,156,	0,855,1224,1604,1827,4394,5579,8146,16695,16994,17278,
#Partially deleted in new
chr17	43528336	43545899	chr17:43528336-43545899	1	-	43528518	43545617	0	13	407,102,173,69,75,266,162,127,54,48,94,111,39,	0,798,1167,1547,1770,4337,4850,5522,8089,16638,16937,17221,17524,
#Deleted in new
chr17	43528498	43530434	chr17:43528498-43530434	1	-	43528518	43530161	0	5	245,102,173,69,328,	0,636,1005,1385,1608,
#Partially deleted in new
chr17	43532929	43545402	chr17:43532929-43545402	0	-	43532929	43532929	8553170	7	10,162,127,54,86,48,129,	0,257,929,3496,10950,12045,12344,
#Partially deleted in new
chr17	43533343	43546315	chr17:43533343-43546315	0	-	43533343	43533343	8553170	6	5,127,54,48,395,131,	0,515,3082,11631,11930,12841,
#Partially deleted in new
chr17	43536315	43546025	chr17:43536315-43546025	0	-	43536315	43536315	8553170	5	164,48,94,111,165,	0,8659,8958,9242,9545,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	43544784	43610338	chr17:43544784-43610338	0	+	43544784	43544784	8553170	3	31,78,452,	0,45303,65102,
#Partially deleted in new
chr17	43544975	43579620	chr17:43544975-43579620	0	-	43544975	43545310	789624	4	47,94,111,329,	0,298,582,34316,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43607435	43607723	chr17:43607435-43607723	3	-	43607435	43607435	8553170	1	288,	0,
#Partially deleted in new
chr17	43640387	43661954	chr17:43640387-43661954	3	-	43641909	43661534	789624	3	1645,173,889,	0,3100,20678,
#Partially deleted in new
chr17	43640401	43661563	chr17:43640401-43661563	1	-	43641946	43661534	789624	2	1631,498,	0,20664,
#Partially deleted in new
chr17	43641378	43661563	chr17:43641378-43661563	1	-	43641909	43661446	789624	2	654,498,	0,19687,
#Partially deleted in new
chr17	43641379	43661922	chr17:43641379-43661922	1	-	43641909	43661189	789624	4	653,173,328,52,	0,2108,19686,20491,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	43680272	43705884	chr17:43680272-43705884	3	+	43680272	43680272	8553170	2	93,456,	0,25156,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	43718313	43720436	chr17:43718313-43720436	7	-	43718313	43718313	16724991	1	2123,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	43753730	43758788	chr17:43753730-43758788	3	-	43755341	43758741	0	2	2033,267,	0,4791,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	43766120	43778988	chr17:43766120-43778988	3	-	43769608	43778924	0	3	3694,227,189,	0,8591,12679,
#Partially deleted in new
chr17	43768385	43778935	chr17:43768385-43778935	0	-	43777800	43778924	789624	4	1429,227,285,136,	0,6326,9143,10414,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	43774881	43778337	chr17:43774881-43778337	0	-	43774881	43774881	8553170	2	57,481,	0,2975,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	43780434	43787612	chr17:43780434-43787612	3	+	43780462	43783893	789624	6	152,71,119,124,57,3230,	0,684,1339,2745,3402,3948,
#Deleted in new
chr17	43782803	43784682	chr17:43782803-43784682	3	-	43782803	43782803	8553170	3	376,103,15,	0,1588,1864,
#Deleted in new
chr17	43783185	43784833	chr17:43783185-43784833	0	+	43783185	43783893	789624	4	118,57,129,216,	0,651,1197,1432,
#Partially deleted in new
chr17	43800798	43832242	chr17:43800798-43832242	1	-	43801700	43831981	789624	18	1079,123,109,94,81,165,42,21,65,197,75,86,82,138,81,78,119,361,	0,8157,10008,10313,13212,13398,15239,15878,17247,20063,23132,24957,26952,28855,29228,30445,30760,31083,
#Partially deleted in new
chr17	43801417	43833170	chr17:43801417-43833170	0	-	43816077	43831906	789624	19	460,123,109,94,81,165,42,65,197,75,86,82,138,81,78,119,62,59,70,	0,7538,9389,9694,12593,12779,14620,16628,19444,22513,24338,26333,28236,28609,29826,30141,30464,31343,31683,
#Partially deleted in new
chr17	43801442	43833170	chr17:43801442-43833170	3	-	43801700	43831906	789624	20	435,123,109,94,81,165,42,21,65,197,75,86,82,138,81,78,119,62,59,70,	0,7513,9364,9669,12568,12754,14595,15234,16603,19419,22488,24313,26308,28211,28584,29801,30116,30439,31318,31658,
#Partially deleted in new
chr17	43808999	43811571	chr17:43808999-43811571	0	-	43808999	43808999	8553170	3	79,109,460,	0,1807,2112,
#Partially deleted in new
chr17	43811156	43814394	chr17:43811156-43814394	0	-	43811156	43811156	8553170	3	49,81,198,	0,2854,3040,
#Partially deleted in new
chr17	43814010	43814634	chr17:43814010-43814634	0	-	43814010	43814010	8553170	3	81,165,34,	0,186,590,
#Partially deleted in new
chr17	43814010	43820914	chr17:43814010-43820914	0	-	43819071	43820914	789624	6	81,165,42,65,82,53,	0,186,2027,4035,4989,6851,
#Partially deleted in new
chr17	43817918	43833144	chr17:43817918-43833144	0	-	43817918	43817918	8553170	13	192,197,75,86,82,138,81,78,119,62,175,59,44,	0,2943,6012,7837,9832,11735,12108,13325,13640,13963,14158,14842,15182,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	43825040	43831633	chr17:43825040-43831633	0	-	43825040	43825040	8553170	6	801,82,138,81,78,75,	0,2710,4613,4986,6203,6518,
#Partially deleted in new
chr17	43847147	43857997	chr17:43847147-43857997	1	+	43847216	43857828	789624	6	112,336,238,113,53,208,	0,1410,6659,8059,9956,10642,
#Partially deleted in new
chr17	43847147	43858234	chr17:43847147-43858234	1	+	43847216	43857828	789624	7	112,336,102,238,113,53,445,	0,1410,5764,6659,8059,9956,10642,
#Partially deleted in new
chr17	43847152	43849909	chr17:43847152-43849909	1	+	43847216	43848967	789624	2	107,1352,	0,1405,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	43847155	43857760	chr17:43847155-43857760	1	+	43847216	43857535	789624	6	104,336,85,113,53,297,	0,1402,6804,8051,9948,10308,
#Partially deleted in new
chr17	43847155	43858040	chr17:43847155-43858040	1	+	43847216	43857828	789624	6	104,336,85,113,53,251,	0,1402,6804,8051,9948,10634,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	43847175	43863629	chr17:43847175-43863629	3	+	43847216	43861911	789624	7	84,336,102,238,113,53,1832,	0,1382,5736,6631,8031,9928,14622,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	43855275	43855796	chr17:43855275-43855796	0	+	43855275	43855275	8553170	2	44,201,	0,320,
#Partially deleted in new
chr17	43875356	43907745	chr17:43875356-43907745	1	-	43877806	43904460	789624	13	2627,129,203,162,69,106,132,228,150,153,119,64,272,	0,3918,4425,5334,5733,5887,6101,6927,7546,7846,22905,29073,32117,
#Partially deleted in new
chr17	43875356	43900598	chr17:43875356-43900598	1	-	43877806	43900552	789624	12	2627,129,203,162,69,106,132,228,150,153,119,128,	0,3918,4425,5334,5733,5887,6101,6927,7546,7846,22905,25114,
#Partially deleted in new
chr17	43875362	43901562	chr17:43875362-43901562	1	-	43877806	43898378	789624	12	2621,129,203,162,69,106,132,228,150,153,119,279,	0,3912,4419,5328,5727,5881,6095,6921,7540,7840,22899,25921,
#Partially deleted in new
chr17	43875362	43907942	chr17:43875362-43907942	3	-	43877806	43904460	789624	14	2621,129,203,162,69,106,132,228,150,153,119,64,72,730,	0,3912,4419,5328,5727,5881,6095,6921,7540,7840,22899,29067,30717,31850,
#Partially deleted in new
chr17	43875362	43909711	chr17:43875362-43909711	1	-	43877806	43898378	789624	12	2621,129,203,162,69,106,132,228,150,153,119,170,	0,3912,4419,5328,5727,5881,6095,6921,7540,7840,22899,34179,
#Partially deleted in new
chr17	43875362	43907942	chr17:43875362-43907942	1	-	43877806	43904460	789624	14	2621,129,203,162,69,106,132,228,150,180,1,154,64,469,	0,3912,4419,5328,5727,5881,6095,6921,7540,7840,8023,22864,29067,32111,
#Partially deleted in new
chr17	43876161	43907526	chr17:43876161-43907526	1	-	43877806	43904460	789624	14	1822,129,203,162,69,106,132,228,150,153,72,119,64,53,	0,3113,3620,4529,4928,5082,5296,6122,6741,7041,7922,22100,28268,31312,
#Partially deleted in new
chr17	43877331	43907536	chr17:43877331-43907536	1	-	43877806	43882938	789624	12	652,129,203,162,69,106,132,228,150,153,64,63,	0,1943,2450,3359,3758,3912,4126,4952,5571,5871,27098,30142,
#Partially deleted in new
chr17	43877376	43907536	chr17:43877376-43907536	1	-	43877806	43898378	789624	12	607,129,203,162,69,106,132,228,150,153,119,63,	0,1898,2405,3314,3713,3867,4081,4907,5526,5826,20885,30097,
#Partially deleted in new
chr17	43877761	43909700	chr17:43877761-43909700	1	-	43877806	43909643	789624	13	222,129,203,162,69,106,132,228,150,153,119,64,159,	0,1513,2020,2929,3328,3482,3696,4522,5141,5441,20500,26668,31780,
#Partially deleted in new
chr17	43882344	43907759	chr17:43882344-43907759	0	-	43882344	43898378	789624	5	167,150,153,101,286,	0,558,858,15935,25129,
#Partially deleted in new
chr17	43882373	43901564	chr17:43882373-43901564	0	-	43882373	43898378	789624	5	138,150,153,119,281,	0,529,829,15888,18910,
#Partially deleted in new
chr17	43882442	43907306	chr17:43882442-43907306	0	-	43882442	43882442	8553170	5	69,453,119,64,97,	0,460,15819,21987,24767,
#Partially deleted in new
chr17	43882902	43907467	chr17:43882902-43907467	0	-	43882902	43904460	789624	5	150,153,119,64,255,	0,300,15359,21527,24310,
#Partially deleted in new
chr17	43882902	43909683	chr17:43882902-43909683	0	-	43882902	43898378	789624	4	150,153,119,142,	0,300,15359,26639,
#Partially deleted in new
chr17	43882909	43907233	chr17:43882909-43907233	0	-	43882909	43904460	789624	5	143,153,119,64,105,	0,293,15352,21520,24219,
#Partially deleted in new
chr17	43882942	43907543	chr17:43882942-43907543	0	-	43882942	43904460	789624	5	110,153,137,64,70,	0,260,15301,21487,24531,
#Partially deleted in new
chr17	43882977	43907535	chr17:43882977-43907535	0	-	43882977	43904460	789624	6	75,153,119,64,72,62,	0,225,15284,21452,23102,24496,
#Partially deleted in new
chr17	43883018	43905589	chr17:43883018-43905589	0	-	43883018	43904460	789624	5	34,153,119,64,222,	0,184,15243,21411,22349,
#Partially deleted in new
chr17	43883285	43907475	chr17:43883285-43907475	0	-	43883285	43904460	789624	5	70,119,64,72,263,	0,14976,21144,22794,23927,
#Partially deleted in new
chr17	43898316	43907471	chr17:43898316-43907471	0	-	43898316	43904460	789624	4	64,64,72,343,	0,6113,7763,8812,
#Partially deleted in new
chr17	43914432	43917399	chr17:43914432-43917399	0	-	43914432	43914432	8553170	2	338,107,	0,2860,
#Deleted in new
chr17	43917193	43917985	chr17:43917193-43917985	3	+	43917193	43917193	789624	1	792,	0,
#Deleted in new
chr17	43917208	43917963	chr17:43917208-43917963	0	+	43917208	43917208	8553170	1	755,	0,
#Partially deleted in new
chr17	43922774	43927388	chr17:43922774-43927388	7	-	43922774	43922774	16724991	5	549,447,858,234,342,	0,740,2024,3377,4272,
#Deleted in new
chr17	43938362	43938959	chr17:43938362-43938959	3	+	43938362	43938362	8553170	2	35,399,	0,198,
#Deleted in new
chr17	43940803	43942468	chr17:43940803-43942468	3	-	43940927	43941654	0	4	149,72,191,48,	0,339,660,1617,
#Deleted in new
chr17	43940803	43941514	chr17:43940803-43941514	0	-	43940927	43941514	789624	2	149,372,	0,339,
#Deleted in new
chr17	43940803	43941299	chr17:43940803-43941299	0	-	43940803	43940803	8553170	1	496,	0,
#Deleted in new
chr17	43940803	43942465	chr17:43940803-43942465	0	-	43941271	43941654	789624	4	149,178,191,45,	0,339,660,1617,
#Deleted in new
chr17	43940804	43942274	chr17:43940804-43942274	1	-	43940927	43941654	0	4	148,72,191,88,	0,338,659,1382,
#Deleted in new
chr17	43940814	43941654	chr17:43940814-43941654	1	-	43940927	43941654	789624	3	138,102,191,	0,328,649,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	43952737	44004469	chr17:43952737-44004469	3	-	43952955	43953483	0	7	243,81,188,126,91,245,79,	0,371,558,1112,5200,13550,51653,
#Deleted in new
chr17	43952888	43953940	chr17:43952888-43953940	1	-	43953104	43953483	0	3	301,188,91,	0,407,961,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	44004545	44009060	chr17:44004545-44009060	3	+	44004663	44008601	0	7	544,275,214,181,172,183,613,	0,1091,1478,1983,2777,3045,3902,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	44004756	44009060	chr17:44004756-44009060	0	+	44004756	44008601	789624	7	333,275,214,181,172,207,613,	0,880,1267,1772,2566,2810,3691,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	44006047	44009063	chr17:44006047-44009063	0	+	44006047	44006047	8553170	4	190,966,183,616,	0,481,1543,2400,
#Partially deleted in new
chr17	44011190	44014977	chr17:44011190-44014977	1	-	44011927	44014952	789624	4	1046,147,181,162,	0,1818,3166,3625,
#Partially deleted in new
chr17	44012508	44014952	chr17:44012508-44014952	1	-	44012957	44014952	789624	3	647,181,137,	0,1848,2307,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	44025019	44025223	chr17:44025019-44025223	3	-	44025019	44025019	8553170	1	204,	0,
#Partially deleted in new
chr17	44034634	44067619	chr17:44034634-44067619	3	-	44036207	44066587	789624	6	1666,127,110,134,270,177,	0,2777,5512,29166,31829,32808,
#Partially deleted in new
chr17	44034635	44066735	chr17:44034635-44066735	1	-	44036207	44066587	789624	5	1665,127,110,134,272,	0,2776,5511,29165,31828,
#Partially deleted in new
chr17	44036062	44040340	chr17:44036062-44040340	0	-	44036062	44036062	8553170	3	238,127,194,	0,1349,4084,
#Partially deleted in new
chr17	44070734	44076304	chr17:44070734-44076304	3	+	44070965	44076043	789624	6	449,107,91,119,142,625,	0,3425,3945,4234,4575,4945,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	44070744	44074187	chr17:44070744-44074187	0	+	44070965	44071187	789624	3	498,184,28,	0,883,3415,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	44070749	44076310	chr17:44070749-44076310	0	+	44070965	44071628	789624	7	434,194,107,91,119,142,631,	0,878,3410,3930,4219,4560,4930,
#Partially deleted in new
chr17	44070750	44076300	chr17:44070750-44076300	0	+	44070965	44071187	789624	6	492,107,91,119,142,621,	0,3409,3929,4218,4559,4929,
#Partially deleted in new
chr17	44070891	44075841	chr17:44070891-44075841	0	+	44070965	44075841	789624	6	292,70,20,119,142,162,	0,3268,3859,4077,4418,4788,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	44070912	44073939	chr17:44070912-44073939	0	+	44070912	44070912	8553170	1	3027,	0,
#Partially deleted in new
chr17	44071166	44075832	chr17:44071166-44075832	0	+	44071166	44071166	8553170	5	17,107,91,483,153,	0,2993,3513,3802,4513,
#Deleted in new
chr17	44074733	44076344	chr17:44074733-44076344	0	+	44074733	44075709	789624	3	37,142,665,	0,576,946,
#Partially deleted in new
chr17	44076745	44123638	chr17:44076745-44123638	3	-	44078375	44117515	0	27	1670,166,85,134,119,98,120,88,56,108,50,121,134,166,285,212,223,132,113,147,131,115,172,260,75,211,135,	0,1754,2049,2398,3361,3655,4017,5839,6019,6799,7059,7809,8276,9826,10666,11641,14524,14954,15426,15635,15930,16346,16568,16829,33983,40748,46758,
#Partially deleted in new
chr17	44076753	44123618	chr17:44076753-44123618	1	-	44078375	44117515	0	25	1662,166,85,134,119,98,120,88,56,108,50,166,285,212,223,132,113,147,131,115,172,260,72,211,115,	0,1746,2041,2390,3353,3647,4009,5831,6011,6791,7051,9818,10658,11633,14516,14946,15418,15627,15922,16338,16560,16821,33975,40740,46750,
#Partially deleted in new
chr17	44078293	44123275	chr17:44078293-44123275	1	-	44078375	44117515	0	27	122,166,85,134,119,98,120,88,56,108,50,121,134,166,285,212,223,132,113,147,131,115,172,260,72,211,22,	0,206,501,850,1813,2107,2469,4291,4471,5251,5511,6261,6728,8278,9118,10093,12976,13406,13878,14087,14382,14798,15020,15281,32435,39200,44960,
#Deleted in new
chr17	44078607	44079336	chr17:44078607-44079336	0	-	44078607	44078607	8553170	2	272,193,	0,536,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	44081570	44092183	chr17:44081570-44092183	0	-	44081570	44081570	8553170	12	1102,56,108,50,121,134,166,285,212,223,132,12,	0,1194,1974,2234,2984,3451,5001,5841,6816,9699,10129,10601,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	44081596	44085355	chr17:44081596-44085355	0	-	44081596	44081596	8553170	6	1076,56,108,50,121,334,	0,1168,1948,2208,2958,3425,
#Partially deleted in new
chr17	44082583	44086755	chr17:44082583-44086755	0	-	44082583	44082583	8553170	7	89,56,108,50,121,134,184,	0,181,961,1221,1971,2438,3988,
#Partially deleted in new
chr17	44088447	44093187	chr17:44088447-44093187	0	-	44088447	44093187	789624	6	151,223,132,113,131,96,	0,2822,3252,3724,4228,4644,
#Partially deleted in new
chr17	44091292	44093505	chr17:44091292-44093505	0	-	44091292	44091292	8553170	6	200,132,147,131,115,192,	0,407,1088,1383,1799,2021,
#Partially deleted in new
chr17	44093663	44123702	chr17:44093663-44123702	0	-	44093663	44110795	789624	3	171,75,199,	0,17065,29840,
#Partially deleted in new
chr17	44093780	44123628	chr17:44093780-44123628	0	-	44093780	44110795	789624	3	54,75,375,	0,16948,29473,
#Partially deleted in new
chr17	44093780	44111341	chr17:44093780-44111341	0	-	44093780	44110879	789624	2	54,613,	0,16948,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	44115911	44120595	chr17:44115911-44120595	3	+	44115911	44115911	789624	3	84,117,158,	0,4075,4526,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	44135882	44135989	chr17:44135882-44135989	3	-	44135882	44135882	8553170	1	107,	0,
#Partially deleted in new
chr17	44141905	44162476	chr17:44141905-44162476	3	+	44142142	44161932	789624	10	240,51,1170,84,141,112,86,126,109,606,	0,3297,5952,9055,10731,12647,12947,13380,15927,19965,
#Partially deleted in new
chr17	44141907	44162285	chr17:44141907-44162285	1	+	44142142	44161932	789624	10	238,51,1170,84,141,109,86,126,109,415,	0,3295,5950,9053,10729,12648,12945,13378,15925,19963,
#Partially deleted in new
chr17	44142021	44162476	chr17:44142021-44162476	1	+	44142142	44161891	789624	7	124,51,1170,109,86,126,606,	0,3181,5836,12534,12831,13264,19849,
#Partially deleted in new
chr17	44147770	44152767	chr17:44147770-44152767	0	+	44147770	44147770	8553170	2	1257,131,	0,4866,
#Partially deleted in new
chr17	44154359	44162004	chr17:44154359-44162004	0	+	44154359	44154359	8553170	5	305,86,126,109,134,	0,493,926,3473,7511,
#Partially deleted in new
chr17	44170446	44172209	chr17:44170446-44172209	0	+	44171041	44172209	789624	3	91,244,164,	0,400,1599,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	44170705	44179083	chr17:44170705-44179083	3	+	44170789	44178390	789624	5	385,268,493,114,879,	0,1340,6032,6903,7499,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	44170723	44178995	chr17:44170723-44178995	0	+	44170789	44177658	789624	5	367,268,203,114,791,	0,1322,6014,6885,7481,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	44175972	44186671	chr17:44175972-44186671	3	-	44175972	44175972	789624	4	1844,98,164,107,	0,5650,6957,10592,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	44175985	44177313	chr17:44175985-44177313	0	-	44175985	44175985	8553170	1	1328,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	44176208	44186625	chr17:44176208-44186625	0	-	44176208	44176208	8553170	4	434,119,140,61,	0,5414,6721,10356,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	44176254	44186652	chr17:44176254-44186652	0	-	44176254	44176254	789624	3	388,98,88,	0,5368,10310,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	44177696	44186717	chr17:44177696-44186717	0	-	44177696	44177696	8553170	4	120,180,98,153,	0,487,3926,8868,
#Partially deleted in new
chr17	44186969	44191226	chr17:44186969-44191226	1	+	44189046	44190864	789624	6	140,68,103,365,178,726,	0,706,937,1965,2441,3531,
#Partially deleted in new
chr17	44186985	44191730	chr17:44186985-44191730	3	+	44189046	44190864	789624	3	124,567,1230,	0,2036,3515,
#Partially deleted in new
chr17	44186989	44191698	chr17:44186989-44191698	1	+	44187708	44190864	789624	4	120,68,567,1198,	0,686,2032,3511,
#Partially deleted in new
chr17	44187048	44191714	chr17:44187048-44191714	1	+	44187708	44190864	789624	4	61,127,567,1214,	0,568,1973,3452,
#Partially deleted in new
chr17	44187049	44191731	chr17:44187049-44191731	1	+	44189046	44190532	789624	3	60,278,1231,	0,1972,3451,
#Partially deleted in new
chr17	44187205	44191726	chr17:44187205-44191726	1	+	44189046	44190864	789624	3	538,654,1226,	0,1729,3295,
#Partially deleted in new
chr17	44187233	44190721	chr17:44187233-44190721	0	+	44189046	44189471	789624	5	198,70,93,165,221,	0,1788,1973,2190,3267,
#Partially deleted in new
chr17	44187261	44191712	chr17:44187261-44191712	1	+	44189046	44190864	789624	3	139,567,1212,	0,1760,3239,
#Partially deleted in new
chr17	44187271	44191711	chr17:44187271-44191711	1	+	44189046	44190532	789624	4	472,103,365,1211,	0,635,1663,3229,
#Partially deleted in new
chr17	44187274	44191711	chr17:44187274-44191711	1	+	44189046	44190683	789624	3	469,157,1211,	0,1660,3226,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	44187653	44190349	chr17:44187653-44190349	1	+	44189046	44189592	789624	2	90,1415,	0,1281,
#Partially deleted in new
chr17	44187931	44190553	chr17:44187931-44190553	0	+	44189046	44189471	789624	5	78,157,93,165,53,	0,1003,1275,1492,2569,
#Partially deleted in new
chr17	44188850	44191725	chr17:44188850-44191725	0	+	44189046	44189464	789624	3	449,165,1225,	0,573,1650,
#Partially deleted in new
chr17	44188932	44191731	chr17:44188932-44191731	1	+	44189046	44190532	789624	2	367,1231,	0,1568,
#Partially deleted in new
chr17	44189369	44191691	chr17:44189369-44191691	0	+	44189369	44190864	789624	3	219,386,586,	0,1131,1736,
#Partially deleted in new
chr17	44191804	44198379	chr17:44191804-44198379	3	-	44194262	44198070	0	12	2607,158,72,44,69,29,46,23,98,172,133,360,	0,2712,2963,3292,3614,3995,4229,4591,5124,5423,5793,6215,
#Partially deleted in new
chr17	44191804	44198070	chr17:44191804-44198070	1	-	44194262	44198070	0	12	2607,158,72,44,69,29,67,23,98,172,133,51,	0,2712,2963,3292,3614,3995,4229,4591,5124,5423,5793,6215,
#Partially deleted in new
chr17	44191804	44196053	chr17:44191804-44196053	0	-	44194262	44196053	789624	7	2607,158,72,62,69,29,20,	0,2712,2963,3292,3614,3995,4229,
#Partially deleted in new
chr17	44194239	44200113	chr17:44194239-44200113	0	-	44194239	44194239	8553170	6	172,158,72,44,24,57,	0,277,528,857,1179,5817,
#Partially deleted in new
chr17	44194370	44195293	chr17:44194370-44195293	0	-	44194370	44194370	8553170	4	41,158,72,197,	0,146,397,726,
#Partially deleted in new
chr17	44194382	44199852	chr17:44194382-44199852	0	-	44194382	44198070	789624	13	29,158,72,44,69,29,46,23,98,172,133,111,357,	0,134,385,714,1036,1417,1651,2013,2546,2845,3215,3637,5113,
#Partially deleted in new
chr17	44194539	44196166	chr17:44194539-44196166	0	-	44194539	44195107	789624	6	135,72,44,69,86,133,	0,228,557,879,1260,1494,
#Partially deleted in new
chr17	44194650	44196163	chr17:44194650-44196163	0	-	44194650	44194650	8553170	5	24,72,44,69,364,	0,117,446,768,1149,
#Partially deleted in new
chr17	44194656	44195476	chr17:44194656-44195476	0	-	44194656	44194656	8553170	2	484,58,	0,762,
#Partially deleted in new
chr17	44195120	44196213	chr17:44195120-44196213	0	-	44195120	44195120	8553170	4	20,69,29,180,	0,298,679,913,
#Partially deleted in new
chr17	44196940	44198511	chr17:44196940-44198511	0	-	44196940	44198070	789624	5	86,172,133,111,91,	0,287,657,1079,1480,
#Partially deleted in new
chr17	44196963	44199206	chr17:44196963-44199206	0	-	44196963	44198070	789624	5	63,172,133,111,143,	0,264,634,1056,2100,
#Partially deleted in new
chr17	44198881	44216565	chr17:44198881-44216565	3	+	44198881	44198881	8553170	2	53,475,	0,17209,
#Partially deleted in new
chr17	44205032	44221626	chr17:44205032-44221626	3	-	44207241	44218229	0	21	2335,144,72,48,190,89,111,156,156,114,42,142,134,111,121,65,156,84,176,125,426,	0,2421,2666,2831,4319,4612,5091,5285,5759,6006,6257,6573,6840,7311,7786,8185,10621,10873,11496,13139,16168,
#Partially deleted in new
chr17	44205032	44220963	chr17:44205032-44220963	1	-	44207241	44218229	0	20	2335,144,72,48,190,89,111,156,156,114,42,142,134,121,65,156,84,176,125,224,	0,2421,2666,2831,4319,4612,5091,5285,5759,6006,6257,6573,6840,7786,8185,10621,10873,11496,13139,15707,
#Partially deleted in new
chr17	44206593	44220854	chr17:44206593-44220854	1	-	44207183	44218229	789624	20	774,144,68,48,190,89,111,156,156,114,42,142,134,121,65,156,84,176,125,115,	0,860,1109,1270,2758,3051,3530,3724,4198,4445,4696,5012,5279,6225,6624,9060,9312,9935,11578,14146,
#Partially deleted in new
chr17	44206594	44219121	chr17:44206594-44219121	1	-	44207241	44218229	0	20	773,144,72,48,190,89,111,156,156,114,42,142,134,121,65,156,84,176,125,113,	0,859,1104,1269,2757,3050,3529,3723,4197,4444,4695,5011,5278,6224,6623,9059,9311,9934,11577,12414,
#Partially deleted in new
chr17	44206919	44219498	chr17:44206919-44219498	1	-	44207241	44218229	0	21	448,144,72,48,190,89,111,156,156,114,42,142,134,111,121,65,156,84,176,125,54,	0,534,779,944,2432,2725,3204,3398,3872,4119,4370,4686,4953,5424,5899,6298,8734,8986,9609,11252,12525,
#Partially deleted in new
chr17	44207115	44219750	chr17:44207115-44219750	1	-	44207241	44218229	0	20	252,144,72,48,190,89,111,156,156,114,42,142,134,121,65,156,84,176,125,306,	0,338,583,748,2236,2529,3008,3202,3676,3923,4174,4490,4757,5703,6102,8538,8790,9413,11056,12329,
#Partially deleted in new
chr17	44207239	44218502	chr17:44207239-44218502	1	-	44207241	44218229	0	19	128,144,72,48,190,89,111,156,156,114,42,142,134,121,65,156,84,176,331,	0,214,459,624,2112,2405,2884,3078,3552,3799,4050,4366,4633,5579,5978,8414,8666,9289,10932,
#Partially deleted in new
chr17	44207239	44218502	chr17:44207239-44218502	1	-	44207241	44218229	0	20	128,144,72,48,190,89,111,156,156,114,42,142,134,111,121,65,156,84,176,331,	0,214,459,624,2112,2405,2884,3078,3552,3799,4050,4366,4633,5104,5579,5978,8414,8666,9289,10932,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	44207486	44209422	chr17:44207486-44209422	0	-	44208962	44209422	789624	5	111,72,48,383,71,	0,212,377,1132,1865,
#Deleted in new
chr17	44207770	44207839	chr17:44207770-44207839	3	-	44207770	44207770	5263520	1	69,	0,
#Deleted in new
chr17	44209218	44210142	chr17:44209218-44210142	0	-	44209218	44209218	8553170	3	323,89,19,	0,426,905,
#Deleted in new
chr17	44209434	44211002	chr17:44209434-44211002	0	-	44209434	44210911	789624	5	107,89,111,156,211,	0,210,689,883,1357,
#Deleted in new
chr17	44212179	44213356	chr17:44212179-44213356	0	-	44212179	44212179	8553170	3	275,121,139,	0,639,1038,
#Deleted in new
chr17	44213224	44218502	chr17:44213224-44218502	0	-	44213224	44218229	789624	4	58,156,176,331,	0,2429,3304,4947,
#Deleted in new
chr17	44215353	44218540	chr17:44215353-44218540	0	-	44215353	44215353	8553170	4	456,84,176,369,	0,552,1175,2818,
#Deleted in new
chr17	44221400	44222814	chr17:44221400-44222814	1	+	44221400	44221400	8553170	2	216,353,	0,1061,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	44221914	44223710	chr17:44221914-44223710	3	+	44221914	44221914	8553170	1	1796,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	44228759	44230228	chr17:44228759-44230228	7	-	44228759	44228759	16724991	1	1469,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr17	44248384	44268134	chr17:44248384-44268134	3	-	44250457	44262866	0	20	2154,174,170,254,167,90,174,195,149,195,211,182,85,124,136,181,62,91,83,81,	0,2774,3034,4733,6111,6822,7288,8965,9274,9601,10028,10778,11112,11424,12019,12250,13190,14251,14467,19669,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	44248389	44268134	chr17:44248389-44268134	1	-	44250457	44262866	789624	15	2149,174,170,254,167,15,83,85,124,136,181,62,91,83,81,	0,2769,3029,4728,6106,6817,10872,11107,11419,12014,12245,13185,14246,14462,19664,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	44248389	44249868	chr17:44248389-44249868	1	-	44249093	44249204	789624	2	992,441,	0,1038,
#Deleted in new
chr17	44260403	44262066	chr17:44260403-44262066	0	-	44260403	44260403	8553170	4	136,181,62,40,	0,231,1171,1623,
#Partially deleted in new
chr17	44260804	44268141	chr17:44260804-44268141	0	-	44260804	44260804	8553170	4	11,62,299,88,	0,770,1831,7249,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	44276367	44281182	chr17:44276367-44281182	3	-	44276367	44276367	8553170	2	253,3808,	0,1007,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	44290855	44291151	chr17:44290855-44291151	3	-	44290855	44290855	8553170	1	296,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	44299573	44315315	chr17:44299573-44315315	3	-	44299573	44299573	8553170	5	4634,209,135,71,154,	0,7718,10324,11811,15588,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	44302516	44308393	chr17:44302516-44308393	0	-	44302516	44302516	789624	4	1691,63,209,137,	0,2464,4775,5740,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	44303964	44304203	chr17:44303964-44304203	3	+	44303964	44303964	8553170	1	239,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	44307087	44307172	chr17:44307087-44307172	3	+	44307087	44307087	8553170	1	85,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	44308412	44318670	chr17:44308412-44318670	0	+	44308412	44308412	8553170	11	527,116,149,86,90,81,166,158,341,84,575,	0,4167,4691,5005,6322,6516,6742,7039,7972,8627,9683,
#Partially deleted in new
chr17	44308558	44318671	chr17:44308558-44318671	3	+	44308832	44318238	789624	11	381,116,149,86,90,81,166,158,138,107,576,	0,4021,4545,4859,6176,6370,6596,6893,7826,8060,9537,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	44308582	44317726	chr17:44308582-44317726	1	+	44308832	44317504	789624	11	357,116,134,86,90,81,166,158,138,107,242,	0,3997,4536,4835,6152,6346,6572,6869,7802,8036,8902,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	44308595	44317870	chr17:44308595-44317870	1	+	44308832	44317504	789624	11	344,116,149,86,90,81,166,158,138,107,386,	0,3984,4508,4822,6139,6333,6559,6856,7789,8023,8889,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	44310703	44318669	chr17:44310703-44318669	0	+	44310703	44310703	8553170	10	810,116,134,1407,81,166,158,133,107,574,	0,1876,2415,2714,4225,4451,4748,5686,5915,7392,
#Deleted in new
chr17	44314757	44315713	chr17:44314757-44315713	0	+	44314757	44314757	8553170	4	67,81,166,262,	0,171,397,694,
#Partially deleted in new
chr17	44316554	44318670	chr17:44316554-44318670	0	+	44316554	44316554	8553170	2	171,575,	0,1541,
#Partially deleted in new
chr17	44319624	44324870	chr17:44319624-44324870	3	-	44320000	44323562	789624	12	492,81,82,110,174,125,68,110,45,60,100,160,	0,571,730,997,1433,1809,2075,2794,3183,3659,3853,5086,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	44319626	44324147	chr17:44319626-44324147	0	-	44319626	44319626	8553170	10	490,81,82,110,501,68,110,45,60,670,	0,569,728,995,1431,2073,2792,3181,3657,3851,
#Partially deleted in new
chr17	44319635	44324815	chr17:44319635-44324815	1	-	44320000	44323562	789624	12	481,81,82,110,174,125,68,134,45,60,100,105,	0,560,719,986,1422,1798,2064,2783,3172,3648,3842,5075,
#Partially deleted in new
chr17	44319641	44324809	chr17:44319641-44324809	1	-	44320000	44323562	789624	12	475,81,82,110,174,125,68,110,45,60,113,99,	0,554,713,980,1416,1792,2058,2777,3166,3642,3836,5069,
#Partially deleted in new
chr17	44319672	44324782	chr17:44319672-44324782	1	-	44320000	44321554	789624	8	444,81,82,110,174,125,68,72,	0,523,682,949,1385,1761,2027,5038,
#Deleted in new
chr17	44319690	44321147	chr17:44319690-44321147	0	-	44319690	44319690	8553170	4	426,241,110,90,	0,505,931,1367,
#Deleted in new
chr17	44319819	44321524	chr17:44319819-44321524	0	-	44321338	44321524	789624	5	297,81,82,110,227,	0,376,535,802,1478,
#Partially deleted in new
chr17	44319869	44324827	chr17:44319869-44324827	1	-	44320000	44323562	789624	11	247,81,82,110,174,125,68,110,60,100,117,	0,326,485,752,1188,1564,1830,2549,3414,3608,4841,
#Partially deleted in new
chr17	44319994	44322445	chr17:44319994-44322445	0	-	44320000	44322445	789624	8	122,81,82,128,174,125,68,27,	0,201,360,627,1063,1439,1705,2424,
#Partially deleted in new
chr17	44320628	44324827	chr17:44320628-44324827	0	-	44320628	44320628	8553170	6	930,68,134,60,100,117,	0,1071,1790,2655,2849,4082,
#Partially deleted in new
chr17	44320937	44324827	chr17:44320937-44324827	0	-	44320937	44320937	8553170	7	621,68,110,45,60,100,117,	0,762,1481,1870,2346,2540,3773,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	44321433	44324818	chr17:44321433-44324818	0	-	44321433	44323562	789624	7	125,68,110,45,60,323,108,	0,266,985,1374,1850,2044,3277,
#Partially deleted in new
chr17	44321476	44324827	chr17:44321476-44324827	0	-	44321476	44323562	789624	6	82,68,134,60,100,117,	0,223,942,1807,2001,3234,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	44322421	44324822	chr17:44322421-44324822	0	-	44322421	44323562	789624	5	107,45,60,242,112,	0,386,862,1056,2289,
#Partially deleted in new
chr17	44322438	44324770	chr17:44322438-44324770	0	-	44322438	44323562	789624	6	90,45,60,100,70,472,	0,369,845,1039,1691,1860,
#Partially deleted in new
chr17	44322472	44324806	chr17:44322472-44324806	0	-	44322472	44322472	8553170	4	380,60,100,96,	0,811,1005,2238,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	44322526	44324830	chr17:44322526-44324830	0	-	44322526	44323562	789624	5	26,45,60,323,120,	0,281,757,951,2184,
#Partially deleted in new
chr17	44328612	44331462	chr17:44328612-44331462	3	+	44328612	44328612	8553170	2	124,213,	0,2637,
#Partially deleted in new
chr17	44345085	44353102	chr17:44345085-44353102	3	+	44349164	44352798	0	13	249,145,126,85,113,136,110,127,98,246,234,231,442,	0,4072,4340,4581,5142,5356,5605,5951,6277,6464,6929,7255,7575,
#Partially deleted in new
chr17	44345245	44349894	chr17:44345245-44349894	0	+	44345245	44345245	8553170	4	89,145,126,228,	0,3912,4180,4421,
#Partially deleted in new
chr17	44345261	44349736	chr17:44345261-44349736	0	+	44349164	44349736	789624	5	73,132,145,126,70,	0,348,3896,4164,4405,
#Partially deleted in new
chr17	44345264	44349474	chr17:44345264-44349474	0	+	44349164	44349474	789624	3	341,145,49,	0,3893,4161,
#Partially deleted in new
chr17	44345264	44350287	chr17:44345264-44350287	0	+	44349164	44350287	789624	6	70,40,145,126,85,60,	0,301,3893,4161,4402,4963,
#Partially deleted in new
chr17	44345281	44350469	chr17:44345281-44350469	0	+	44349164	44350469	789624	6	53,141,126,85,113,28,	0,3880,4144,4385,4946,5160,
#Partially deleted in new
chr17	44345297	44350325	chr17:44345297-44350325	0	+	44349164	44350325	789624	7	37,132,140,145,126,85,98,	0,312,791,3860,4128,4369,4930,
#Partially deleted in new
chr17	44345301	44349275	chr17:44345301-44349275	0	+	44349164	44349275	789624	3	304,140,118,	0,787,3856,
#Partially deleted in new
chr17	44345301	44350511	chr17:44345301-44350511	0	+	44349164	44350511	789624	6	33,145,126,127,113,70,	0,3856,4124,4323,4926,5140,
#Partially deleted in new
chr17	44345301	44351044	chr17:44345301-44351044	0	+	44349164	44351044	789624	6	33,145,126,136,110,8,	0,3856,4124,5140,5389,5735,
#Partially deleted in new
chr17	44345301	44350283	chr17:44345301-44350283	0	+	44349164	44350283	789624	6	33,140,145,126,85,56,	0,787,3856,4124,4365,4926,
#Partially deleted in new
chr17	44345301	44349789	chr17:44345301-44349789	0	+	44345301	44345301	8553170	3	33,394,123,	0,3856,4365,
#Partially deleted in new
chr17	44345301	44350304	chr17:44345301-44350304	0	+	44349164	44350304	789624	6	33,75,145,126,85,77,	0,229,3856,4124,4365,4926,
#Partially deleted in new
chr17	44345304	44353082	chr17:44345304-44353082	1	+	44349164	44352798	789624	9	30,145,126,85,113,246,234,231,422,	0,3853,4121,4362,4923,6245,6710,7036,7356,
#Partially deleted in new
chr17	44345305	44349811	chr17:44345305-44349811	0	+	44345305	44345305	8553170	3	29,145,386,	0,3852,4120,
#Partially deleted in new
chr17	44345313	44351163	chr17:44345313-44351163	0	+	44349164	44350569	789624	8	21,145,126,85,113,116,110,127,	0,3844,4112,4353,4914,5148,5377,5723,
#Deleted in new
chr17	44349164	44352795	chr17:44349164-44352795	1	+	44349164	44352795	0	11	138,126,85,113,136,110,127,98,203,43,135,	0,261,502,1063,1277,1526,1872,2198,2385,3364,3496,
#Deleted in new
chr17	44350288	44351300	chr17:44350288-44351300	0	+	44350288	44350288	8553170	4	52,136,110,264,	0,153,402,748,
#Deleted in new
chr17	44350538	44353043	chr17:44350538-44353043	0	+	44350538	44352652	789624	7	39,110,127,98,246,234,703,	0,152,498,824,1011,1476,1802,
#Deleted in new
chr17	44350771	44351795	chr17:44350771-44351795	0	+	44350771	44350771	8553170	4	29,64,98,246,	0,265,591,778,
#Deleted in new
chr17	44350910	44351599	chr17:44350910-44351599	0	+	44350910	44350910	8553170	2	550,50,	0,639,
#Deleted in new
chr17	44352201	44353102	chr17:44352201-44353102	0	+	44352201	44352769	789624	3	47,231,387,	0,139,514,
#Partially deleted in new
chr17	44353214	44363875	chr17:44353214-44363875	3	-	44353732	44363714	789624	8	1977,127,117,180,159,93,228,279,	0,2500,2743,2958,3215,6364,6690,10382,
#Partially deleted in new
chr17	44355966	44363812	chr17:44355966-44363812	0	-	44359102	44363714	789624	7	108,180,159,82,93,228,216,	0,206,463,3095,3612,3938,7630,
#Partially deleted in new
chr17	44356305	44363834	chr17:44356305-44363834	0	-	44359102	44363714	789624	6	47,159,199,93,228,238,	0,124,2639,3273,3599,7291,
#Partially deleted in new
chr17	44359345	44363800	chr17:44359345-44363800	0	-	44359345	44359345	8553170	3	326,228,204,	0,559,4251,
#Deleted in new
chr17	44365013	44365751	chr17:44365013-44365751	7	-	44365013	44365013	16724991	1	738,	0,
#Partially deleted in new
chr17	44372179	44385340	chr17:44372179-44385340	0	-	44372363	44385340	8553170	25	244,102,114,126,153,100,81,80,93,148,68,126,152,56,105,46,183,212,53,54,44,48,129,46,55,	0,2479,2818,3411,3653,3905,4128,4829,5518,6182,6463,7509,7822,8066,8206,8420,8699,11313,11714,11905,12131,12358,12768,12984,13106,
#Partially deleted in new
chr17	44372180	44376184	chr17:44372180-44376184	0	-	44372363	44376184	789624	3	243,153,100,	0,3652,3904,
#Partially deleted in new
chr17	44372182	44389505	chr17:44372182-44389505	3	-	44372363	44389473	0	30	241,117,102,114,126,153,100,81,80,93,148,68,126,152,56,105,46,183,212,53,54,44,48,129,46,50,166,98,122,220,	0,2171,2476,2815,3408,3650,3902,4125,4826,5515,6179,6460,7506,7819,8063,8203,8417,8696,11310,11711,11902,12128,12355,12765,12981,13103,13368,13641,13827,17103,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	44373923	44383497	chr17:44373923-44383497	0	-	44373923	44373923	8553170	15	1793,153,100,81,80,93,148,68,126,152,56,105,46,183,5,	0,1909,2161,2384,3085,3774,4438,4719,5765,6078,6322,6462,6676,6955,9569,
#Partially deleted in new
chr17	44380056	44385202	chr17:44380056-44385202	0	-	44380056	44380056	8553170	10	97,56,105,462,212,53,54,44,48,39,	0,189,329,543,3436,3837,4028,4254,4481,5107,
#Deleted in new
chr17	44383682	44385195	chr17:44383682-44385195	0	-	44383682	44383682	8553170	6	22,53,54,275,129,32,	0,211,402,628,1265,1481,
#Deleted in new
chr17	44383763	44385363	chr17:44383763-44385363	0	-	44383763	44383763	8553170	7	183,54,44,48,129,39,82,	0,321,547,774,1184,1400,1518,
#Deleted in new
chr17	44383937	44385202	chr17:44383937-44385202	0	-	44383937	44383937	8553170	5	201,44,48,129,39,	0,373,600,1010,1226,
#Deleted in new
chr17	44383937	44385341	chr17:44383937-44385341	0	-	44383937	44383937	8553170	6	9,54,44,48,129,178,	0,147,373,600,1010,1226,
#Deleted in new
chr17	44384320	44385809	chr17:44384320-44385809	0	-	44384320	44384320	8553170	6	34,48,129,39,54,259,	0,217,627,843,961,1230,
#Partially deleted in new
chr17	44395283	44465935	chr17:44395283-44465935	0	-	44395283	44395283	8553170	7	6170,131,144,87,68,45,1464,	0,10637,29065,39781,41194,43387,69188,
#Partially deleted in new
chr17	44396573	44436787	chr17:44396573-44436787	0	-	44396573	44396573	8553170	6	4880,131,50,144,87,310,	0,9347,10643,27775,38491,39904,
#Partially deleted in new
chr17	44397415	44503404	chr17:44397415-44503404	0	-	44467102	44503370	789624	9	4038,131,144,87,68,73,18,75,79,	0,8505,26933,37649,39062,67056,69681,77413,105910,
#Partially deleted in new
chr17	44397415	44503401	chr17:44397415-44503401	3	-	44397567	44503370	789624	8	4038,131,144,87,68,73,75,76,	0,8505,26933,37649,39062,67056,77413,105910,
#Partially deleted in new
chr17	44401336	44503391	chr17:44401336-44503391	0	-	44401336	44503370	789624	7	117,131,144,87,68,73,66,	0,4584,23012,33728,35141,63135,101989,
#Partially deleted in new
chr17	44401407	44503389	chr17:44401407-44503389	0	-	44473738	44503370	789624	10	46,131,144,87,68,73,106,35,75,64,	0,4513,22941,33657,35070,63064,65689,72317,73421,101918,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	44409058	44409358	chr17:44409058-44409358	3	-	44409058	44409058	8553170	1	300,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	44424376	44445922	chr17:44424376-44445922	0	-	44424376	44424376	8553170	5	116,87,68,45,168,	0,10688,12101,14294,21378,
#Partially deleted in new
chr17	44435068	44503403	chr17:44435068-44503403	0	-	44473738	44503370	789624	7	83,68,45,73,35,75,78,	0,1409,3602,29403,38656,39760,68257,
#Partially deleted in new
chr17	44436506	44503403	chr17:44436506-44503403	0	-	44473738	44503370	789624	6	39,45,73,35,75,78,	0,2164,27965,37218,38322,66819,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	44473289	44503430	chr17:44473289-44503430	0	-	44473289	44473289	8553170	3	470,75,105,	0,1539,30036,
#Partially deleted in new
chr17	44474419	44503406	chr17:44474419-44503406	0	-	44474419	44474419	8553170	2	484,81,	0,28906,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	44486152	44486815	chr17:44486152-44486815	3	-	44486152	44486152	8553170	1	663,	0,
#Deleted in new
chr17	44557458	44559570	chr17:44557458-44559570	3	+	44557688	44559386	0	1	2112,	0,
#Partially deleted in new
chr17	44596345	44597344	chr17:44596345-44597344	7	+	44596345	44596345	16724991	2	121,204,	0,795,
#Partially deleted in new
chr17	44645410	44645587	chr17:44645410-44645587	7	+	44645410	44645410	16724991	1	177,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	44646363	44650349	chr17:44646363-44650349	3	-	44646363	44646363	789624	3	341,102,1582,	0,921,2404,
#Partially deleted in new
chr17	44656403	44662390	chr17:44656403-44662390	0	+	44656613	44662390	789624	3	216,135,74,	0,723,5913,
#Partially deleted in new
chr17	44656471	44675799	chr17:44656471-44675799	3	+	44656613	44674196	789624	8	211,135,155,105,1858,135,181,1824,	0,655,5845,8912,9904,12911,16894,17504,
#Partially deleted in new
chr17	44665103	44666899	chr17:44665103-44666899	0	+	44666409	44666899	789624	2	34,524,	0,1272,
#Partially deleted in new
chr17	44665111	44666797	chr17:44665111-44666797	0	+	44666409	44666797	789624	3	26,105,422,	0,272,1264,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	44665117	44671220	chr17:44665117-44671220	1	+	44666409	44669538	789624	3	371,1858,1838,	0,1258,4265,
#Partially deleted in new
chr17	44673068	44689725	chr17:44673068-44689725	0	-	44673457	44689725	789624	3	457,88,176,	0,10803,16481,
#Deleted in new
chr17	44673688	44676257	chr17:44673688-44676257	3	-	44673688	44673688	8553170	1	2569,	0,
#Partially deleted in new
chr17	44676966	44687769	chr17:44676966-44687769	0	+	44676966	44676966	8553170	4	120,108,107,120,	0,1312,1976,10683,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	44677439	44689779	chr17:44677439-44689779	1	-	44679006	44689753	789624	4	1604,136,88,230,	0,4563,6432,12110,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	44677457	44689762	chr17:44677457-44689762	3	-	44678855	44689753	789624	5	1586,59,136,88,213,	0,3127,4545,6414,12092,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	44677482	44689763	chr17:44677482-44689763	1	-	44678855	44689753	789624	5	1561,68,136,88,214,	0,3102,4520,6389,12067,
#Partially deleted in new
chr17	44681730	44689745	chr17:44681730-44689745	0	-	44681730	44681730	8553170	3	408,88,196,	0,2141,7819,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	44689857	44693340	chr17:44689857-44693340	3	+	44689857	44689857	8553170	1	3483,	0,
#Partially deleted in new
chr17	44708607	44752264	chr17:44708607-44752264	1	+	44708820	44751963	789624	15	232,63,143,192,51,88,74,37,46,117,109,125,125,83,325,	0,696,14272,21297,22357,23570,25482,28222,29771,32728,38475,38783,39733,41987,43332,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	44708655	44732877	chr17:44708655-44732877	0	+	44708655	44708655	8553170	5	184,63,143,192,1913,	0,648,14224,21249,22309,
#Partially deleted in new
chr17	44708655	44731218	chr17:44708655-44731218	0	+	44708655	44708655	8553170	5	184,63,143,192,254,	0,648,14224,21249,22309,
#Partially deleted in new
chr17	44708682	44752264	chr17:44708682-44752264	3	+	44708820	44751253	789624	14	157,63,143,192,51,88,74,37,46,117,109,125,125,1670,	0,621,14197,21222,22282,23495,25407,28147,29696,32653,38400,38708,39658,41912,
#Partially deleted in new
chr17	44708697	44750239	chr17:44708697-44750239	0	+	44708820	44734095	789624	12	142,63,143,192,51,74,37,46,117,109,125,1899,	0,606,14182,21207,22267,25392,28132,29681,32638,38385,38693,39643,
#Partially deleted in new
chr17	44708727	44734153	chr17:44708727-44734153	0	+	44708727	44708727	8553170	5	112,143,192,51,64,	0,14152,21177,22237,25362,
#Partially deleted in new
chr17	44708843	44731246	chr17:44708843-44731246	0	+	44708843	44708843	8553170	5	95,63,143,192,282,	0,460,14036,21061,22121,
#Partially deleted in new
chr17	44708845	44731160	chr17:44708845-44731160	0	+	44708845	44708845	8553170	4	93,143,192,196,	0,14034,21059,22119,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	44708861	44731422	chr17:44708861-44731422	0	+	44708861	44708861	8553170	5	77,63,143,192,458,	0,442,14018,21043,22103,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	44718860	44719130	chr17:44718860-44719130	3	-	44718860	44718860	8553170	1	270,	0,
#Deleted in new
chr17	44719759	44720597	chr17:44719759-44720597	7	-	44719759	44719759	16724991	1	838,	0,
#Partially deleted in new
chr17	44733658	44749399	chr17:44733658-44749399	0	+	44733658	44733658	8553170	7	505,37,46,117,109,125,1059,	0,3171,4720,7677,13424,13732,14682,
#Partially deleted in new
chr17	44759030	44781846	chr17:44759030-44781846	3	+	44759199	44779754	789624	27	230,176,77,67,86,76,67,68,75,72,167,85,91,52,100,72,93,81,51,64,100,120,169,115,91,18,2108,	0,691,10687,10951,12553,12725,13236,13368,13826,13983,14230,15264,15461,15667,16181,16363,16553,17096,17714,17868,18135,18451,18664,18921,19121,20191,20708,
#Partially deleted in new
chr17	44759178	44781647	chr17:44759178-44781647	0	+	44759199	44772908	789624	27	82,176,77,67,86,76,67,64,75,72,167,85,91,52,100,72,93,81,51,64,100,120,169,115,91,18,1909,	0,543,10539,10803,12405,12577,13088,13220,13678,13835,14082,15116,15313,15519,16033,16215,16405,16948,17566,17720,17987,18303,18516,18773,18973,20043,20560,
#Partially deleted in new
chr17	44759324	44779875	chr17:44759324-44779875	1	+	44772319	44779754	789624	27	163,176,77,67,86,76,67,64,75,72,167,85,91,52,100,72,93,81,51,64,100,120,169,115,91,18,137,	0,397,10393,10657,12259,12431,12942,13074,13532,13689,13936,14970,15167,15373,15887,16069,16259,16802,17420,17574,17841,18157,18370,18627,18827,19897,20414,
#Partially deleted in new
chr17	44769985	44780610	chr17:44769985-44780610	0	+	44769985	44777562	789624	24	63,86,76,67,68,75,72,167,85,91,52,100,72,93,81,51,64,100,130,169,115,91,18,872,	0,1598,1770,2281,2413,2871,3028,3275,4309,4506,4712,5226,5408,5598,6141,6759,6913,7180,7486,7709,7966,8166,9236,9753,
#Deleted in new
chr17	44775557	44777802	chr17:44775557-44777802	0	+	44775557	44775557	8553170	7	119,81,51,64,100,120,108,	0,569,1187,1341,1608,1924,2137,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	44793198	44794474	chr17:44793198-44794474	3	+	44793198	44793198	8553170	2	176,386,	0,890,
#Partially deleted in new
chr17	44794746	44797783	chr17:44794746-44797783	3	-	44794746	44794746	8553170	2	366,221,	0,2816,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	44798447	44830811	chr17:44798447-44830811	1	-	44804626	44805817	0	3	7390,76,174,	0,8946,32190,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	44798447	44805409	chr17:44798447-44805409	0	-	44804626	44805409	789624	2	2404,822,	0,6140,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	44798447	44830813	chr17:44798447-44830813	3	-	44804626	44805817	0	2	7390,176,	0,32190,
#Partially deleted in new
chr17	44803033	44807884	chr17:44803033-44807884	1	-	44804626	44805817	0	2	2804,491,	0,4360,
#Deleted in new
chr17	44803948	44804966	chr17:44803948-44804966	0	-	44804626	44804966	789624	2	166,379,	0,639,
#Partially deleted in new
chr17	44804246	44830231	chr17:44804246-44830231	1	-	44804626	44805817	0	3	1591,76,170,	0,3147,25815,
#Partially deleted in new
chr17	44805506	44830816	chr17:44805506-44830816	0	-	44805506	44805817	789624	3	331,76,179,	0,1887,25131,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	44805599	44813305	chr17:44805599-44813305	0	-	44805599	44805817	789624	3	238,76,258,	0,1794,7448,
#Partially deleted in new
chr17	44805607	44829694	chr17:44805607-44829694	0	-	44805607	44805817	789624	3	230,76,172,	0,1786,23915,
#Partially deleted in new
chr17	44846352	44850476	chr17:44846352-44850476	3	+	44848152	44850396	0	4	74,193,135,145,	0,1707,2901,3979,
#Partially deleted in new
chr17	44847897	44849213	chr17:44847897-44849213	0	+	44847897	44847897	8553170	3	20,193,108,	0,162,1208,
#Partially deleted in new
chr17	44847901	44850480	chr17:44847901-44850480	1	+	44848152	44850396	0	3	351,135,149,	0,1352,2430,
#Partially deleted in new
chr17	44847940	44850476	chr17:44847940-44850476	1	+	44848152	44850396	789624	2	312,145,	0,2391,
#Partially deleted in new
chr17	44848210	44850476	chr17:44848210-44850476	0	+	44848210	44849185	789624	3	42,283,145,	0,895,2121,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr17	44849942	44899662	chr17:44849942-44899662	3	-	44851273	44894521	0	28	1427,108,154,95,119,88,127,87,83,102,141,112,194,128,136,91,64,125,167,83,91,36,66,76,79,166,109,294,	0,1767,2466,3353,3574,4326,4613,4975,7132,9137,9962,10489,12770,13712,14987,17864,18344,22503,25991,29613,30611,31744,33150,33706,35313,36642,44474,49426,
#Partially deleted in new
chr17	44850809	44863595	chr17:44850809-44863595	0	-	44850809	44850809	8553170	11	560,108,154,95,840,127,87,83,102,639,883,	0,900,1599,2486,2707,3746,4108,6265,8270,9095,11903,
#Partially deleted in new
chr17	44850865	44899431	chr17:44850865-44899431	1	-	44851273	44894521	0	28	504,108,154,95,119,88,127,87,83,102,141,112,194,128,136,91,64,125,167,83,91,36,36,76,79,166,109,63,	0,844,1543,2430,2651,3403,3690,4052,6209,8214,9039,9566,11847,12789,14064,16941,17421,21580,25068,28690,29688,30821,32227,32783,34390,35719,43551,48503,
#Partially deleted in new
chr17	44850915	44873167	chr17:44850915-44873167	0	-	44850915	44850915	8553170	17	454,108,154,95,840,127,87,83,102,141,112,194,128,136,91,64,722,	0,794,1493,2380,2601,3640,4002,6159,8164,8989,9516,11797,12739,14014,16891,17371,21530,
#Partially deleted in new
chr17	44850915	44899368	chr17:44850915-44899368	1	-	44851273	44894521	0	28	454,108,154,95,119,88,127,87,83,102,141,112,194,128,136,91,64,125,167,83,91,36,66,76,79,166,109,394,	0,794,1493,2380,2601,3353,3640,4002,6159,8164,8989,9516,11797,12739,14014,16891,17371,21530,25018,28640,29638,30771,32177,32733,34340,35669,43501,48059,
#Partially deleted in new
chr17	44850916	44859649	chr17:44850916-44859649	0	-	44850916	44850916	8553170	8	453,108,154,840,127,87,83,570,	0,793,1492,2600,3639,4001,6158,8163,
#Partially deleted in new
chr17	44851046	44857121	chr17:44851046-44857121	0	-	44851273	44857121	789624	7	323,108,119,88,127,87,47,	0,663,2470,3222,3509,3871,6028,
#Partially deleted in new
chr17	44851119	44899445	chr17:44851119-44899445	1	-	44851273	44886750	0	27	250,108,154,95,119,88,127,87,83,102,141,112,194,128,136,91,64,125,167,83,91,36,66,76,79,166,77,	0,590,1289,2176,2397,3149,3436,3798,5955,7960,8785,9312,11593,12535,13810,16687,17167,21326,24814,28436,29434,30567,31973,32529,34136,35465,48249,
#Partially deleted in new
chr17	44851256	44854662	chr17:44851256-44854662	0	-	44852472	44854662	789624	6	113,108,154,119,88,107,	0,453,1152,2260,3012,3299,
#Partially deleted in new
chr17	44854974	44857639	chr17:44854974-44857639	0	-	44854974	44854974	8553170	2	30,565,	0,2100,
#Partially deleted in new
chr17	44860453	44865268	chr17:44860453-44865268	0	-	44860453	44860453	8553170	5	90,194,128,136,27,	0,2259,3201,4476,4788,
#Partially deleted in new
chr17	44862752	44864062	chr17:44862752-44864062	0	-	44862752	44862752	8553170	2	154,408,	0,902,
#Partially deleted in new
chr17	44862759	44865232	chr17:44862759-44865232	0	-	44862759	44862759	8553170	3	147,128,303,	0,895,2170,
#Partially deleted in new
chr17	44862789	44868399	chr17:44862789-44868399	0	-	44862789	44862789	8553170	5	117,128,136,91,113,	0,865,2140,5017,5497,
#Partially deleted in new
chr17	44864969	44872526	chr17:44864969-44872526	0	-	44868443	44872526	789624	4	96,91,98,81,	0,2837,3412,7476,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	44875632	44879590	chr17:44875632-44879590	0	-	44875632	44875632	8553170	2	468,35,	0,3923,
#Partially deleted in new
chr17	44875938	44881835	chr17:44875938-44881835	0	-	44875938	44875938	8553170	4	162,83,91,149,	0,3617,4615,5748,
#Partially deleted in new
chr17	44876088	44894497	chr17:44876088-44894497	0	-	44885313	44894497	789624	8	12,83,91,36,66,76,79,81,	0,3467,4465,5598,7004,7560,9167,18328,
#Partially deleted in new
chr17	44879515	44880630	chr17:44879515-44880630	0	-	44879515	44879515	8553170	2	123,77,	0,1038,
#Partially deleted in new
chr17	44880476	44881843	chr17:44880476-44881843	0	-	44880476	44880476	8553170	2	168,157,	0,1210,
#Partially deleted in new
chr17	44883139	44899403	chr17:44883139-44899403	0	-	44883139	44894521	789624	7	19,76,79,166,109,67,35,	0,509,2116,3445,11277,15835,16229,
#Partially deleted in new
chr17	44883555	44899445	chr17:44883555-44899445	0	-	44883555	44883555	8553170	5	169,79,166,109,77,	0,1700,3029,10861,15813,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	44883985	44884274	chr17:44883985-44884274	3	+	44883985	44883985	8553170	1	289,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	44885255	44899403	chr17:44885255-44899403	0	-	44885255	44885255	8553170	4	79,166,281,35,	0,1329,8989,14113,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	44885286	44899049	chr17:44885286-44899049	0	-	44885286	44894521	789624	5	48,166,109,164,75,	0,1298,9130,10539,13688,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	44886662	44892329	chr17:44886662-44892329	0	-	44886662	44886662	8553170	2	88,496,	0,5171,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	44894133	44899403	chr17:44894133-44899403	0	-	44894133	44894133	8553170	2	392,35,	0,5235,
#Partially deleted in new
chr17	44899141	44901554	chr17:44899141-44901554	0	+	44900998	44901554	789624	3	389,152,35,	0,1848,2378,
#Partially deleted in new
chr17	44899711	44902882	chr17:44899711-44902882	1	+	44900998	44902817	789624	4	118,152,133,518,	0,1278,1808,2653,
#Partially deleted in new
chr17	44899711	44903679	chr17:44899711-44903679	3	+	44900998	44902817	789624	4	148,152,133,1315,	0,1278,1808,2653,
#Partially deleted in new
chr17	44899715	44902800	chr17:44899715-44902800	0	+	44900998	44902800	789624	4	128,152,133,436,	0,1274,1804,2649,
#Partially deleted in new
chr17	44899738	44902482	chr17:44899738-44902482	1	+	44900998	44902338	789624	4	121,152,133,165,	0,1251,1781,2579,
#Partially deleted in new
chr17	44899773	44905390	chr17:44899773-44905390	1	+	44903829	44905071	789624	4	86,152,133,3026,	0,1216,1746,2591,
#Partially deleted in new
chr17	44899773	44905390	chr17:44899773-44905390	3	+	44900998	44902817	789624	4	86,152,133,3026,	0,1216,1746,2591,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	44903160	44916539	chr17:44903160-44916539	3	-	44907346	44915486	789624	9	4228,86,44,221,126,162,96,61,1514,	0,4903,7454,8075,8511,10108,10567,10867,11865,
#Partially deleted in new
chr17	44903160	44915500	chr17:44903160-44915500	1	-	44903411	44915486	789624	10	399,113,86,44,221,126,162,96,61,475,	0,1281,4903,7454,8075,8511,10108,10567,10867,11865,
#Partially deleted in new
chr17	44903186	44911281	chr17:44903186-44911281	0	-	44905116	44911281	789624	4	1963,86,44,46,	0,4877,7428,8049,
#Partially deleted in new
chr17	44903187	44910115	chr17:44903187-44910115	0	-	44903187	44903187	8553170	5	372,113,384,86,24,	0,1254,1578,4876,6904,
#Partially deleted in new
chr17	44903197	44908076	chr17:44903197-44908076	0	-	44905116	44908076	789624	3	362,1191,13,	0,761,4866,
#Partially deleted in new
chr17	44903229	44911303	chr17:44903229-44911303	0	-	44903229	44903229	8553170	4	1920,86,567,68,	0,4834,6862,8006,
#Partially deleted in new
chr17	44903233	44910635	chr17:44903233-44910635	0	-	44905116	44910635	789624	5	326,113,384,86,21,	0,1208,1532,4830,7381,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	44903235	44908688	chr17:44903235-44908688	0	-	44903235	44903235	8553170	2	1914,625,	0,4828,
#Partially deleted in new
chr17	44903240	44908134	chr17:44903240-44908134	0	-	44905116	44908134	789624	5	319,275,113,384,71,	0,718,1201,1525,4823,
#Partially deleted in new
chr17	44903253	44910620	chr17:44903253-44910620	0	-	44905116	44910620	789624	4	306,708,86,6,	0,1188,4810,7361,
#Partially deleted in new
chr17	44903313	44911299	chr17:44903313-44911299	0	-	44908089	44911299	789624	6	246,1058,86,35,44,64,	0,1128,4750,6912,7301,7922,
#Partially deleted in new
chr17	44904079	44908126	chr17:44904079-44908126	0	-	44904437	44908126	789624	2	475,63,	0,3984,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	44905630	44908247	chr17:44905630-44908247	0	-	44905630	44905630	8553170	1	2617,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	44905644	44915500	chr17:44905644-44915500	1	-	44907346	44915486	789624	10	1744,86,120,44,221,126,162,96,61,475,	0,2419,4496,4970,5591,6027,7624,8083,8383,9381,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	44905713	44911297	chr17:44905713-44911297	0	-	44907880	44911297	789624	3	2436,44,62,	0,4901,5522,
#Partially deleted in new
chr17	44906087	44915141	chr17:44906087-44915141	0	-	44906095	44915141	789624	9	77,86,44,221,126,162,96,61,116,	0,1976,4527,5148,5584,7181,7640,7940,8938,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	44906884	44910227	chr17:44906884-44910227	0	-	44906884	44906884	8553170	2	504,2164,	0,1179,
#Partially deleted in new
chr17	44906938	44909752	chr17:44906938-44909752	0	-	44906938	44906938	8553170	3	450,86,43,	0,1125,2771,
#Partially deleted in new
chr17	44907204	44911515	chr17:44907204-44911515	0	-	44907204	44907204	8553170	4	184,86,44,280,	0,859,3410,4031,
#Partially deleted in new
chr17	44907316	44911292	chr17:44907316-44911292	0	-	44910135	44911292	789624	4	833,169,44,57,	0,2775,3298,3919,
#Partially deleted in new
chr17	44908134	44912934	chr17:44908134-44912934	0	-	44908134	44908134	8553170	5	15,44,221,126,160,	0,2480,3101,3537,4640,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	44908226	44915500	chr17:44908226-44915500	0	-	44908226	44908226	8553170	7	2432,221,126,162,96,61,475,	0,3009,3445,5042,5501,5801,6799,
#Partially deleted in new
chr17	44909666	44915500	chr17:44909666-44915500	1	-	44910135	44915486	789624	8	594,44,221,126,162,96,61,475,	0,948,1569,2005,3602,4061,4361,5359,
#Partially deleted in new
chr17	44909684	44915499	chr17:44909684-44915499	0	-	44909684	44909684	8553170	5	974,221,126,162,1772,	0,1551,1987,3584,4043,
#Partially deleted in new
chr17	44909686	44915486	chr17:44909686-44915486	1	-	44910468	44915486	789624	7	972,221,126,162,96,61,461,	0,1549,1985,3582,4041,4341,5339,
#Deleted in new
chr17	44909732	44911319	chr17:44909732-44911319	0	-	44910870	44911319	789624	2	1142,84,	0,1503,
#Partially deleted in new
chr17	44910617	44915504	chr17:44910617-44915504	0	-	44910617	44915486	789624	5	41,86,96,61,479,	0,618,3110,3410,4408,
#Partially deleted in new
chr17	44910636	44915078	chr17:44910636-44915078	0	-	44910636	44910636	8553170	6	22,221,126,162,96,1051,	0,599,1035,2632,3091,3391,
#Partially deleted in new
chr17	44910646	44915500	chr17:44910646-44915500	0	-	44910646	44915486	789624	7	12,86,126,162,96,61,475,	0,589,1025,2622,3081,3381,4379,
#Partially deleted in new
chr17	44910652	44913696	chr17:44910652-44913696	0	-	44910652	44910652	8553170	5	6,221,126,162,94,	0,583,1019,2616,2950,
#Partially deleted in new
chr17	44911302	44915500	chr17:44911302-44915500	0	-	44913744	44915486	789624	5	154,126,162,96,475,	0,369,1966,2425,3723,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	44911411	44912767	chr17:44911411-44912767	0	-	44911411	44911411	8553170	3	45,126,414,	0,260,942,
#Partially deleted in new
chr17	44911671	44913698	chr17:44911671-44913698	0	-	44911671	44911671	8553170	2	126,430,	0,1597,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	44911673	44915951	chr17:44911673-44915951	0	-	44911673	44913316	789624	5	124,162,96,61,135,	0,1595,2054,2354,4143,
#Partially deleted in new
chr17	44911696	44915488	chr17:44911696-44915488	0	-	44911696	44915486	789624	4	101,162,61,463,	0,1572,2331,3329,
#Deleted in new
chr17	44913312	44915500	chr17:44913312-44915500	0	-	44915130	44915486	789624	5	118,96,61,110,195,	0,415,715,1713,1993,
#Deleted in new
chr17	44913798	44915503	chr17:44913798-44915503	0	-	44913798	44915486	789624	3	25,82,478,	0,229,1227,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	44915460	44916937	chr17:44915460-44916937	0	-	44915460	44915486	789624	3	48,148,174,	0,356,1303,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	44924708	44947637	chr17:44924708-44947637	1	-	44926399	44936344	789624	15	1791,90,553,206,128,187,101,75,177,198,111,105,158,327,10,	0,2280,3317,4110,6893,7347,7964,8203,9214,9524,9798,10122,10550,11323,22919,
#Partially deleted in new
chr17	44925991	44947711	chr17:44925991-44947711	3	-	44926079	44936344	789624	16	195,86,90,553,206,128,151,101,75,177,198,111,105,158,327,84,	0,422,997,2034,2827,5610,6064,6681,6920,7931,8241,8515,8839,9267,10040,21636,
#Partially deleted in new
chr17	44926359	44936371	chr17:44926359-44936371	1	-	44926399	44936371	789624	14	140,90,553,206,128,187,101,75,177,198,111,105,158,340,	0,629,1666,2459,5242,5696,6313,6552,7563,7873,8147,8471,8899,9672,
#Partially deleted in new
chr17	44932321	44933976	chr17:44932321-44933976	0	-	44932321	44932321	8553170	3	452,75,54,	0,590,1601,
#Deleted in new
chr17	44934617	44934681	chr17:44934617-44934681	3	-	44934617	44934617	5263520	1	64,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	44947911	44948939	chr17:44947911-44948939	3	+	44947911	44947911	8553170	1	1028,	0,
#Partially deleted in new
chr17	44959692	44968071	chr17:44959692-44968071	3	-	44960187	44968048	789624	2	675,620,	0,7759,
#Deleted in new
chr17	44982513	44982772	chr17:44982513-44982772	3	+	44982513	44982513	8553170	1	259,	0,
#Partially deleted in new
chr17	45023339	45035141	chr17:45023339-45035141	1	-	45024432	45034885	789624	4	1385,88,204,368,	0,6752,10847,11434,
#Partially deleted in new
chr17	45023343	45061018	chr17:45023343-45061018	1	-	45024432	45034885	789624	5	1381,88,204,226,131,	0,6748,10843,11430,37544,
#Partially deleted in new
chr17	45023345	45061109	chr17:45023345-45061109	3	-	45024432	45034885	789624	5	1379,88,204,229,222,	0,6746,10841,11428,37542,
#Partially deleted in new
chr17	45023345	45051517	chr17:45023345-45051517	1	-	45024432	45034885	789624	5	1379,88,204,226,157,	0,6746,10841,11428,28015,
#Partially deleted in new
chr17	45024310	45051610	chr17:45024310-45051610	1	-	45024432	45034885	789624	5	414,88,204,226,58,	0,5781,9876,10463,27242,
#Partially deleted in new
chr17	45024501	45051619	chr17:45024501-45051619	0	-	45024501	45034885	789624	5	223,88,204,226,259,	0,5590,9685,10272,26859,
#Partially deleted in new
chr17	45032043	45034889	chr17:45032043-45034889	0	-	45032043	45032043	8553170	4	78,108,204,116,	0,1891,2143,2730,
#Partially deleted in new
chr17	45033854	45051661	chr17:45033854-45051661	0	-	45033854	45033854	8553170	4	188,204,226,109,	0,332,919,17698,
#Partially deleted in new
chr17	45051609	45109016	chr17:45051609-45109016	3	+	45061329	45105639	0	13	84,178,109,145,119,92,117,171,109,171,168,138,3398,	0,9673,30034,34898,42075,44584,45518,46772,47795,51341,52099,53249,54009,
#Partially deleted in new
chr17	45061305	45086535	chr17:45061305-45086535	0	+	45061305	45061305	8553170	2	155,28,	0,25202,
#Partially deleted in new
chr17	45061311	45109009	chr17:45061311-45109009	1	+	45061329	45105639	0	12	149,109,145,119,92,117,171,109,171,168,138,3391,	0,20332,25196,32373,34882,35816,37070,38093,41639,42397,43547,44307,
#Partially deleted in new
chr17	45061319	45098843	chr17:45061319-45098843	0	+	45061329	45096222	789624	6	141,109,145,92,117,462,	0,20324,25188,34874,35808,37062,
#Partially deleted in new
chr17	45061333	45098455	chr17:45061333-45098455	0	+	45061333	45061333	8553170	6	127,109,145,119,92,74,	0,20310,25174,32351,34860,37048,
#Partially deleted in new
chr17	45061678	45093756	chr17:45061678-45093756	0	+	45086507	45093756	789624	4	232,109,145,72,	0,19965,24829,32006,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	45071441	45071543	chr17:45071441-45071543	3	+	45071441	45071441	8553170	1	102,	0,
#Partially deleted in new
chr17	45093630	45099436	chr17:45093630-45099436	0	+	45093630	45093630	8553170	5	173,92,117,171,32,	0,2563,3497,4751,5774,
#Partially deleted in new
chr17	45097127	45099820	chr17:45097127-45099820	0	+	45097127	45097127	8553170	3	117,171,416,	0,1254,2277,
#Deleted in new
chr17	45102962	45104322	chr17:45102962-45104322	0	+	45102962	45102962	8553170	2	159,614,	0,746,
#Deleted in new
chr17	45104616	45105986	chr17:45104616-45105986	0	+	45104616	45104616	8553170	2	380,368,	0,1002,
#Deleted in new
chr17	45105643	45109016	chr17:45105643-45109016	0	+	45105643	45105643	8553170	2	234,339,	0,3034,
#Deleted in new
chr17	45105764	45108134	chr17:45105764-45108134	0	+	45105764	45105764	8553170	2	181,356,	0,2014,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	45108966	45132498	chr17:45108966-45132498	3	-	45112615	45132410	789624	15	3738,150,136,167,117,151,147,153,145,202,229,130,229,162,251,	0,3896,4155,4472,5283,6127,6377,7665,9027,9324,9848,11358,11935,12244,23281,
#Deleted in new
chr17	45112302	45113548	chr17:45112302-45113548	0	-	45112615	45113548	789624	3	402,136,110,	0,819,1136,
#Deleted in new
chr17	45112422	45115128	chr17:45112422-45115128	0	-	45112422	45112422	8553170	6	282,150,136,150,117,35,	0,440,699,1016,1827,2671,
#Deleted in new
chr17	45113477	45115343	chr17:45113477-45115343	0	-	45113477	45113477	8553170	3	128,117,250,	0,772,1616,
#Deleted in new
chr17	45113571	45115378	chr17:45113571-45115378	0	-	45113571	45113571	8553170	4	34,117,102,35,	0,678,1571,1772,
#Deleted in new
chr17	45114249	45116711	chr17:45114249-45116711	0	-	45114249	45114249	8553170	4	117,151,243,80,	0,844,1094,2382,
#Deleted in new
chr17	45114366	45114433	chr17:45114366-45114433	3	-	45114366	45114366	5263520	1	67,	0,
#Deleted in new
chr17	45118055	45119089	chr17:45118055-45119089	0	-	45118055	45118055	8553170	3	83,202,275,	0,235,759,
#Deleted in new
chr17	45118253	45118922	chr17:45118253-45118922	0	-	45118253	45118253	8553170	2	239,108,	0,561,
#Deleted in new
chr17	45118371	45119012	chr17:45118371-45119012	0	-	45118371	45118371	8553170	2	23,198,	0,443,
#Partially deleted in new
chr17	45120354	45133354	chr17:45120354-45133354	0	-	45120354	45133344	789624	4	100,229,162,104,	0,547,856,12896,
#Partially deleted in new
chr17	45120435	45133213	chr17:45120435-45133213	0	-	45120435	45121343	789624	4	19,229,162,136,	0,466,775,12642,
#Partially deleted in new
chr17	45132599	45144172	chr17:45132599-45144172	1	+	45136144	45143641	0	12	64,256,112,125,121,85,121,87,109,76,140,730,	0,2741,3242,3508,3900,4092,4419,4768,5122,5313,6421,10843,
#Partially deleted in new
chr17	45132599	45135865	chr17:45132599-45135865	0	+	45132599	45132599	8553170	2	64,525,	0,2741,
#Partially deleted in new
chr17	45132604	45135949	chr17:45132604-45135949	0	+	45132604	45132604	8553170	4	59,171,252,111,	0,426,2736,3234,
#Partially deleted in new
chr17	45132628	45135704	chr17:45132628-45135704	0	+	45132628	45132628	8553170	3	35,171,364,	0,402,2712,
#Partially deleted in new
chr17	45132630	45144176	chr17:45132630-45144176	1	+	45136144	45143641	0	12	33,252,115,125,121,85,121,87,109,76,140,734,	0,2710,3208,3477,3869,4061,4388,4737,5091,5282,6390,10812,
#Partially deleted in new
chr17	45135646	45143850	chr17:45135646-45143850	1	+	45136144	45143641	0	10	307,125,121,85,121,87,109,76,140,408,	0,461,853,1045,1372,1721,2075,2266,3374,7796,
#Partially deleted in new
chr17	45135648	45144176	chr17:45135648-45144176	0	+	45135648	45135648	8553170	8	305,669,121,87,109,76,140,734,	0,459,1370,1719,2073,2264,3372,7794,
#Partially deleted in new
chr17	45135686	45144181	chr17:45135686-45144181	3	+	45136144	45143571	0	9	546,121,85,121,87,71,76,140,739,	0,813,1005,1332,1681,2073,2226,3334,7756,
#Deleted in new
chr17	45135687	45137454	chr17:45135687-45137454	0	+	45135687	45135687	8553170	5	266,125,277,121,87,	0,420,812,1331,1680,
#Partially deleted in new
chr17	45135689	45144176	chr17:45135689-45144176	1	+	45136144	45143603	789624	9	264,125,121,85,121,87,71,76,734,	0,418,810,1002,1329,1678,2070,2223,7753,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	45135693	45142959	chr17:45135693-45142959	1	+	45136144	45142610	0	10	260,125,121,85,121,87,71,66,140,377,	0,414,806,998,1325,1674,2066,2229,3327,6889,
#Partially deleted in new
chr17	45135707	45144176	chr17:45135707-45144176	1	+	45136144	45143571	0	10	246,125,121,85,121,87,71,76,140,734,	0,400,792,984,1311,1660,2052,2205,3313,7735,
#Deleted in new
chr17	45136095	45137636	chr17:45136095-45137636	0	+	45136095	45136095	8553170	4	137,277,121,269,	0,404,923,1272,
#Deleted in new
chr17	45136107	45137835	chr17:45136107-45137835	0	+	45136144	45136720	789624	5	125,85,121,87,76,	0,584,911,1260,1652,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	45136200	45138544	chr17:45136200-45138544	0	+	45136200	45136200	8553170	8	32,121,85,121,87,71,76,269,	0,299,491,818,1167,1559,1712,2075,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	45146729	45148470	chr17:45146729-45148470	3	-	45146729	45146729	8553170	1	1741,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	45148501	45152101	chr17:45148501-45152101	3	+	45149190	45150270	0	1	3600,	0,
#Partially deleted in new
chr17	45150399	45161510	chr17:45150399-45161510	3	-	45150399	45150399	8553170	2	520,50,	0,11061,
#Partially deleted in new
chr17	45150617	45159455	chr17:45150617-45159455	0	-	45150617	45150617	8553170	2	302,126,	0,8712,
#Partially deleted in new
chr17	45160699	45170040	chr17:45160699-45170040	3	+	45162793	45169809	789624	4	244,148,110,1026,	0,1788,2050,8315,
#Partially deleted in new
chr17	45160729	45169493	chr17:45160729-45169493	0	+	45160921	45169493	789624	3	214,110,479,	0,2020,8285,
#Partially deleted in new
chr17	45161077	45169314	chr17:45161077-45169314	0	+	45162793	45169314	789624	3	171,110,300,	0,1672,7937,
#Partially deleted in new
chr17	45161093	45169380	chr17:45161093-45169380	0	+	45162793	45169380	789624	3	307,110,366,	0,1656,7921,
#Partially deleted in new
chr17	45161844	45169365	chr17:45161844-45169365	0	+	45162793	45169365	789624	4	187,148,110,351,	0,643,905,7170,
#Partially deleted in new
chr17	45161894	45170035	chr17:45161894-45170035	1	+	45162793	45169809	789624	3	45,110,1021,	0,855,7120,
#Partially deleted in new
chr17	45161895	45169185	chr17:45161895-45169185	0	+	45162793	45169185	789624	4	44,148,110,171,	0,592,854,7119,
#Partially deleted in new
chr17	45161916	45170035	chr17:45161916-45170035	1	+	45162793	45169809	789624	3	115,110,1021,	0,833,7098,
#Partially deleted in new
chr17	45168799	45171485	chr17:45168799-45171485	3	-	45168799	45168799	789624	2	1531,522,	0,2164,
#Partially deleted in new
chr17	45170681	45171584	chr17:45170681-45171584	0	-	45170681	45170681	8553170	2	501,46,	0,857,
#Partially deleted in new
chr17	45190930	45221765	chr17:45190930-45221765	3	-	45190930	45190930	789624	3	240,187,417,	0,29337,30418,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	45218255	45220425	chr17:45218255-45220425	1	-	45218255	45218255	8553170	2	919,158,	0,2012,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	45219349	45222222	chr17:45219349-45222222	1	-	45219349	45219349	8553170	2	283,1955,	0,918,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	45219734	45220332	chr17:45219734-45220332	0	-	45219734	45219734	8553170	2	321,65,	0,533,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	45220266	45221765	chr17:45220266-45221765	0	-	45220266	45220266	8553170	3	188,47,417,	0,601,1082,
#Deleted in new
chr17	45221443	45222097	chr17:45221443-45222097	0	+	45221443	45221443	8553170	2	203,190,	0,464,
#Partially deleted in new
chr17	45221788	45247320	chr17:45221788-45247320	3	+	45222124	45246596	0	27	465,84,114,74,84,129,109,77,94,75,111,150,102,253,300,125,203,235,69,81,130,164,102,96,121,100,454,	0,8815,10578,11435,11859,12283,14347,15492,15757,16775,17166,18687,19340,19593,20058,20552,21329,22002,22387,23030,23190,23464,23843,24089,24421,24716,25078,
#Partially deleted in new
chr17	45222076	45246959	chr17:45222076-45246959	1	+	45222124	45245642	789624	19	111,60,111,150,102,253,44,67,125,203,235,69,81,130,164,115,96,121,93,	0,16502,16878,18399,19052,19305,19770,20003,20264,21041,21714,22099,22742,22902,23176,23542,23801,24133,24790,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	45230668	45234687	chr17:45230668-45234687	0	+	45230668	45230668	8553170	5	19,84,74,84,616,	0,1698,2555,2979,3403,
#Partially deleted in new
chr17	45231426	45239054	chr17:45231426-45239054	0	+	45231426	45231426	8553170	11	14,114,74,84,129,18,109,77,94,75,100,	0,940,1797,2221,2645,3405,4709,5854,6119,7137,7528,
#Deleted in new
chr17	45232861	45233953	chr17:45232861-45233953	0	+	45232861	45232861	8553170	2	436,306,	0,786,
#Partially deleted in new
chr17	45233883	45247319	chr17:45233883-45247319	0	+	45233883	45233883	8553170	16	317,109,77,94,75,111,1671,125,203,454,81,130,164,102,96,1110,	0,2252,3397,3662,4680,5071,6592,8457,9234,9907,10935,11095,11369,11748,11994,12326,
#Partially deleted in new
chr17	45234079	45236594	chr17:45234079-45236594	0	+	45234079	45234079	8553170	2	121,459,	0,2056,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	45238027	45241734	chr17:45238027-45241734	3	-	45238027	45238027	8553170	2	1214,789,	0,2918,
#Deleted in new
chr17	45240314	45241197	chr17:45240314-45241197	0	-	45240314	45240314	8553170	2	290,87,	0,796,
#Deleted in new
chr17	45241074	45247318	chr17:45241074-45247318	1	+	45241164	45246970	789624	14	156,253,300,125,203,235,69,81,130,164,102,96,121,452,	0,307,772,1266,2043,2716,3101,3744,3904,4178,4557,4803,5135,5792,
#Deleted in new
chr17	45243117	45246604	chr17:45243117-45246604	0	+	45243117	45246596	789624	9	203,235,69,81,130,164,102,96,395,	0,673,1058,1701,1861,2135,2514,2760,3092,
#Deleted in new
chr17	45245185	45248339	chr17:45245185-45248339	5	-	45245185	45245185	16724991	4	114,132,174,159,	0,2199,2689,2995,
#Deleted in new
chr17	45245323	45246553	chr17:45245323-45246553	0	+	45245323	45246168	789624	2	93,676,	0,554,
#Deleted in new
chr17	45245325	45246475	chr17:45245325-45246475	0	+	45245325	45246475	789624	3	91,96,266,	0,552,884,
#Deleted in new
chr17	45247266	45247843	chr17:45247266-45247843	4	-	45247266	45247266	16724991	2	250,143,	0,434,
#Partially deleted in new
chr17	45247380	45251129	chr17:45247380-45251129	7	-	45247380	45247380	16724991	8	155,166,156,119,72,144,227,47,	0,502,800,1199,1404,1833,3248,3702,
#Deleted in new
chr17	45247550	45248836	chr17:45247550-45248836	4	-	45247550	45247550	16724991	2	498,52,	0,1234,
#Partially deleted in new
chr17	45247924	45267490	chr17:45247924-45267490	0	+	45247924	45247924	8553170	4	79,84,216,75,	0,7210,19188,19491,
#Partially deleted in new
chr17	45247935	45267588	chr17:45247935-45267588	0	+	45247935	45247935	8553170	2	68,476,	0,19177,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	45247935	45268630	chr17:45247935-45268630	0	+	45247935	45247935	789624	3	68,216,622,	0,19177,20073,
#Partially deleted in new
chr17	45247953	45267466	chr17:45247953-45267466	0	+	45247953	45247953	8553170	3	50,84,354,	0,7181,19159,
#Partially deleted in new
chr17	45247964	45268129	chr17:45247964-45268129	1	+	45247964	45247964	8553170	4	39,84,216,121,	0,7170,19148,20044,
#Deleted in new
chr17	45248250	45249357	chr17:45248250-45249357	4	-	45248250	45248250	16724991	4	86,119,72,144,	0,329,534,963,
#Partially deleted in new
chr17	45254392	45262112	chr17:45254392-45262112	3	-	45254425	45262016	789624	5	121,959,40,55,109,	0,722,1983,2760,7611,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	45254392	45262094	chr17:45254392-45262094	0	-	45260880	45262016	789624	7	121,959,40,55,204,437,91,	0,722,1983,2760,5499,6161,7611,
#Partially deleted in new
chr17	45254392	45262090	chr17:45254392-45262090	0	-	45256088	45262016	789624	5	121,980,40,55,87,	0,722,1983,2760,7611,
#Partially deleted in new
chr17	45255023	45267490	chr17:45255023-45267490	0	+	45255023	45255023	8553170	2	195,378,	0,12089,
#Partially deleted in new
chr17	45261776	45268059	chr17:45261776-45268059	1	+	45261776	45261776	8553170	3	1615,216,644,	0,5336,5639,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	45262079	45268471	chr17:45262079-45268471	0	+	45262079	45262079	789624	3	264,216,463,	0,5033,5929,
#Partially deleted in new
chr17	45262190	45268263	chr17:45262190-45268263	1	+	45262190	45262190	789624	4	153,269,216,255,	0,4059,4922,5818,
#Partially deleted in new
chr17	45263118	45317145	chr17:45263118-45317145	3	-	45264635	45290745	789624	16	1682,101,145,107,354,151,164,105,132,130,138,615,211,70,276,186,	0,2044,3418,3973,4287,7294,7939,10384,11004,11345,21693,23312,24035,26117,27371,53841,
#Partially deleted in new
chr17	45263127	45317017	chr17:45263127-45317017	1	-	45264635	45290745	0	16	1673,101,145,107,354,151,164,105,132,130,138,615,211,70,276,58,	0,2035,3409,3964,4278,7285,7930,10375,10995,11336,21684,23303,24026,26108,27362,53832,
#Partially deleted in new
chr17	45263127	45290976	chr17:45263127-45290976	1	-	45264635	45290745	0	15	1673,101,145,107,354,151,164,105,132,130,138,615,211,70,487,	0,2035,3409,3964,4278,7285,7930,10375,10995,11336,21684,23303,24026,26108,27362,
#Partially deleted in new
chr17	45263127	45290976	chr17:45263127-45290976	0	-	45263127	45263127	8553170	15	1673,101,145,107,354,151,164,105,132,130,138,615,211,70,487,	0,2035,3409,3964,4278,7285,7930,10375,10995,11336,21684,23303,24026,26108,27362,
#Partially deleted in new
chr17	45263134	45273966	chr17:45263134-45273966	0	-	45263134	45263134	8553170	8	1666,101,145,107,354,151,164,464,	0,2028,3402,3957,4271,7278,7923,10368,
#Partially deleted in new
chr17	45263150	45273602	chr17:45263150-45273602	0	-	45263150	45263150	8553170	7	1650,101,145,107,354,809,100,	0,2012,3386,3941,4255,7262,10352,
#Partially deleted in new
chr17	45289267	45317029	chr17:45289267-45317029	0	-	45289267	45290745	789624	4	38,276,153,70,	0,1222,23017,27692,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	45327365	45327497	chr17:45327365-45327497	3	-	45327365	45327365	8553170	1	132,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	45327365	45327497	chr17:45327365-45327497	7	-	45327365	45327365	16724991	1	132,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	45371401	45372057	chr17:45371401-45372057	3	-	45371401	45371401	8553170	2	190,196,	0,460,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr17	45393901	45430297	chr17:45393901-45430297	3	-	45395455	45430279	0	17	1732,106,135,78,99,123,109,99,105,91,68,66,84,81,183,408,675,	0,1842,2081,2305,2585,2766,3014,4047,8812,9717,10127,10367,10543,10699,11022,11774,35721,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr17	45393901	45410424	chr17:45393901-45410424	1	-	45395455	45410288	789624	16	1732,106,135,78,99,123,109,99,105,91,68,84,81,183,408,193,	0,1842,2081,2305,2585,2766,3014,4047,8812,9717,10127,10543,10699,11022,11774,16330,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr17	45393908	45425631	chr17:45393908-45425631	1	-	45395455	45405717	0	17	1725,106,135,78,99,123,109,99,105,91,68,66,84,81,183,408,68,	0,1835,2074,2298,2578,2759,3007,4040,8805,9710,10120,10360,10536,10692,11015,11767,31655,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr17	45393908	45432349	chr17:45393908-45432349	0	-	45393908	45393908	8553170	17	1725,106,135,78,99,123,109,99,105,478,84,81,183,408,675,132,134,	0,1835,2074,2298,2578,2759,3007,4040,8805,9710,10536,10692,11015,11767,35714,37712,38307,
#Partially deleted in new
chr17	45394942	45405934	chr17:45394942-45405934	1	-	45395455	45405717	789624	15	691,106,135,78,99,123,109,99,105,91,68,66,84,183,259,	0,801,1040,1264,1544,1725,1973,3006,7771,8676,9086,9326,9502,9981,10733,
#Deleted in new
chr17	45395426	45395908	chr17:45395426-45395908	0	-	45395426	45395426	8553170	2	207,165,	0,317,
#Deleted in new
chr17	45395454	45396163	chr17:45395454-45396163	0	-	45395454	45395454	8553170	3	179,106,181,	0,289,528,
#Partially deleted in new
chr17	45395455	45430279	chr17:45395455-45430279	1	-	45395455	45430279	789624	16	178,106,135,78,99,123,109,99,105,91,68,84,81,183,408,657,	0,288,527,751,1031,1212,1460,2493,7258,8163,8573,8989,9145,9468,10220,34167,
#Deleted in new
chr17	45396062	45396770	chr17:45396062-45396770	0	-	45396062	45396062	8553170	3	55,379,103,	0,144,605,
#Deleted in new
chr17	45396931	45397477	chr17:45396931-45397477	3	+	45396931	45396931	8553170	2	303,154,	0,392,
#Partially deleted in new
chr17	45397204	45403668	chr17:45397204-45403668	0	-	45397204	45397204	8553170	4	24,99,105,50,	0,744,5509,6414,
#Partially deleted in new
chr17	45397513	45410386	chr17:45397513-45410386	0	-	45397513	45397513	8553170	9	534,105,91,68,84,81,183,408,155,	0,5200,6105,6515,6931,7087,7410,8162,12718,
#Partially deleted in new
chr17	45397964	45404186	chr17:45397964-45404186	0	-	45397964	45397964	8553170	5	83,89,105,91,158,	0,3615,4749,5654,6064,
#Partially deleted in new
chr17	45402713	45425616	chr17:45402713-45425616	0	-	45404496	45405717	789624	8	105,91,68,84,81,79,408,53,	0,905,1315,1731,1887,2314,2962,22850,
#Partially deleted in new
chr17	45402773	45404702	chr17:45402773-45404702	0	-	45402773	45402773	8553170	5	45,91,68,66,258,	0,845,1255,1495,1671,
#Partially deleted in new
chr17	45404444	45410426	chr17:45404444-45410426	0	-	45404444	45410288	789624	5	84,81,183,237,195,	0,156,479,1402,5787,
#Partially deleted in new
chr17	45404474	45432853	chr17:45404474-45432853	0	-	45404474	45404474	8553170	4	54,506,408,102,	0,126,1201,28277,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	45407532	45410385	chr17:45407532-45410385	0	-	45407532	45407532	8553170	1	2853,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	45429351	45434421	chr17:45429351-45434421	1	-	45429487	45430279	0	5	946,132,134,995,112,	0,2269,2864,3400,4958,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	45429352	45432916	chr17:45429352-45432916	1	-	45429487	45430279	0	4	945,132,134,165,	0,2268,2863,3399,
#Partially deleted in new
chr17	45435899	45490744	chr17:45435899-45490744	3	-	45437857	45482484	0	12	2070,158,64,194,146,918,271,385,627,248,89,93,	0,3577,4263,9570,14718,17455,22269,32309,39200,42000,46537,54752,
#Partially deleted in new
chr17	45435902	45446273	chr17:45435902-45446273	0	-	45435902	45435902	8553170	5	2067,158,64,194,145,	0,3574,4260,9567,10226,
#Partially deleted in new
chr17	45435903	45490728	chr17:45435903-45490728	0	-	45475582	45482484	789624	11	2066,158,64,194,146,918,271,385,627,89,77,	0,3573,4259,9566,14714,17451,22265,32305,39196,46533,54748,
#Partially deleted in new
chr17	45437470	45490729	chr17:45437470-45490729	0	-	45458354	45482484	789624	11	499,158,64,194,146,918,271,627,248,89,78,	0,2006,2692,7999,13147,15884,20698,37629,40429,44966,53181,
#Partially deleted in new
chr17	45437548	45445533	chr17:45437548-45445533	0	-	45437857	45445533	789624	4	421,101,64,64,	0,1928,2614,7921,
#Partially deleted in new
chr17	45437915	45441059	chr17:45437915-45441059	0	-	45437915	45437915	8553170	4	54,158,64,223,	0,1561,2247,2921,
#Deleted in new
chr17	45439513	45440373	chr17:45439513-45440373	0	-	45439513	45439513	8553170	2	121,211,	0,649,
#Partially deleted in new
chr17	45439545	45445507	chr17:45439545-45445507	0	-	45440126	45445507	789624	3	89,200,38,	0,481,5924,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	45439614	45448112	chr17:45439614-45448112	0	-	45439614	45439614	8553170	4	20,64,194,201,	0,548,5855,8297,
#Partially deleted in new
chr17	45440162	45487858	chr17:45440162-45487858	0	-	45475582	45482484	789624	9	64,194,146,918,271,385,627,89,131,	0,5307,10455,13192,18006,28046,34937,42274,47565,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	45452843	45464065	chr17:45452843-45464065	3	+	45452843	45452843	8553170	4	245,100,116,308,	0,1954,3426,10914,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	45452937	45460432	chr17:45452937-45460432	0	-	45452937	45452937	8553170	2	1335,1050,	0,6445,
#Deleted in new
chr17	45452937	45454771	chr17:45452937-45454771	0	-	45452937	45452937	8553170	1	1834,	0,
#Partially deleted in new
chr17	45468245	45487862	chr17:45468245-45487862	0	-	45468245	45468245	8553170	3	348,89,135,	0,14191,19482,
#Partially deleted in new
chr17	45475210	45490738	chr17:45475210-45490738	0	-	45475210	45475632	789624	2	516,87,	0,15441,
#Deleted in new
chr17	45475362	45475435	chr17:45475362-45475435	3	-	45475362	45475362	5263520	1	73,	0,
#Partially deleted in new
chr17	45475365	45490741	chr17:45475365-45490741	0	-	45475365	45482484	789624	4	361,47,89,90,	0,2735,7071,15286,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	45475596	45490749	chr17:45475596-45490749	0	-	45475596	45475596	8553170	5	130,186,47,89,98,	0,291,2504,6840,15055,
#Partially deleted in new
chr17	45475695	45490741	chr17:45475695-45490741	0	-	45477895	45482484	789624	4	31,343,89,90,	0,2109,6741,14956,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	45477073	45482525	chr17:45477073-45482525	0	-	45477073	45477073	8553170	2	1074,89,	0,5363,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	45506740	45515156	chr17:45506740-45515156	5	-	45506740	45506740	16724991	4	1799,50,105,1289,	0,3503,6444,7127,
#Partially deleted in new
chr17	45508108	45550335	chr17:45508108-45550335	7	-	45508108	45508108	16724991	14	52,140,55,50,105,1512,288,145,119,81,72,72,72,2609,	0,158,376,2135,5076,5759,9752,11119,13198,31054,31783,34655,37496,39618,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	45526465	45526746	chr17:45526465-45526746	3	-	45526465	45526465	8553170	1	281,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	45531576	45533838	chr17:45531576-45533838	3	+	45531576	45531576	8553170	1	2262,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	45533962	45534710	chr17:45533962-45534710	3	+	45533962	45533962	8553170	2	341,206,	0,542,
#Partially deleted in new
chr17	45545803	45549481	chr17:45545803-45549481	1	+	45545803	45545803	8553170	2	141,419,	0,3259,
#Partially deleted in new
chr17	45545804	45558767	chr17:45545804-45558767	1	+	45545804	45545804	8553170	2	140,361,	0,12602,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	45545876	45554370	chr17:45545876-45554370	0	+	45545876	45545876	8553170	2	68,212,	0,8282,
#Partially deleted in new
chr17	45545899	45563230	chr17:45545899-45563230	3	+	45545899	45545899	8553170	2	45,585,	0,16746,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	45552854	45553805	chr17:45552854-45553805	1	+	45552854	45552854	8553170	2	413,147,	0,804,
#Partially deleted in new
chr17	45553709	45559070	chr17:45553709-45559070	7	-	45553709	45553709	16724991	4	88,94,156,132,	0,2002,4676,5229,
#Deleted in new
chr17	45585870	45586929	chr17:45585870-45586929	7	+	45585870	45585870	16724991	1	1059,	0,
#Partially deleted in new
chr17	45586451	45588379	chr17:45586451-45588379	3	-	45586451	45586451	8553170	2	449,87,	0,1841,
#Deleted in new
chr17	45592620	45593369	chr17:45592620-45593369	3	+	45592620	45592620	8553170	1	749,	0,
#Deleted in new
chr17	45600868	45602340	chr17:45600868-45602340	7	-	45600868	45600868	16724991	1	1472,	0,
#Deleted in new
chr17	45608570	45608918	chr17:45608570-45608918	7	+	45608570	45608570	16724991	1	348,	0,
#Partially deleted in new
chr17	45620327	45636394	chr17:45620327-45636394	5	+	45620327	45620327	16724991	4	45,134,255,112,	0,1580,9576,15955,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	45620339	45655156	chr17:45620339-45655156	7	+	45620339	45620339	16724991	4	33,134,255,9256,	0,1568,9564,25561,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	45620341	45630456	chr17:45620341-45630456	4	+	45620341	45620341	16724991	3	31,134,553,	0,1566,9562,
#Partially deleted in new
chr17	45620343	45835826	chr17:45620343-45835826	3	+	45830184	45834764	789624	15	29,134,255,88,120,86,107,121,154,61,73,86,136,42,1203,	0,1564,9560,186666,196119,201011,208871,209750,210073,210536,212794,213108,213370,213663,214280,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	45620609	45637959	chr17:45620609-45637959	4	+	45620609	45620609	16724991	4	543,134,255,1677,	0,1298,9294,15673,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	45621907	45636344	chr17:45621907-45636344	4	+	45621907	45621907	16724991	4	134,307,255,62,	0,5468,7996,14375,
#Partially deleted in new
chr17	45621925	45816487	chr17:45621925-45816487	0	+	45621925	45621925	8553170	5	116,255,76,88,25,	0,7978,50901,185084,194537,
#Partially deleted in new
chr17	45633048	45636444	chr17:45633048-45636444	5	+	45633048	45633048	16724991	2	126,162,	0,3234,
#Partially deleted in new
chr17	45637200	45646230	chr17:45637200-45646230	4	+	45637200	45637200	16724991	2	201,330,	0,8700,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	45638974	45642300	chr17:45638974-45642300	4	+	45638974	45638974	16724991	2	546,1912,	0,1414,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	45638974	45646008	chr17:45638974-45646008	4	+	45638974	45638974	16724991	2	546,108,	0,6926,
#Partially deleted in new
chr17	45639436	45646232	chr17:45639436-45646232	4	+	45639436	45639436	16724991	3	84,67,332,	0,952,6464,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	45640361	45642303	chr17:45640361-45642303	4	+	45640361	45640361	16724991	1	1942,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	45645670	45648216	chr17:45645670-45648216	4	+	45645670	45645670	16724991	1	2546,	0,
#Partially deleted in new
chr17	45733352	45734669	chr17:45733352-45734669	3	-	45733352	45733352	8553170	2	174,386,	0,931,
#Partially deleted in new
chr17	45784279	45835827	chr17:45784279-45835827	1	+	45784544	45834764	789624	13	298,88,120,86,107,87,121,154,61,73,86,136,1204,	0,22730,32183,37075,44935,45281,45814,46137,46600,48858,49172,49434,50344,
#Partially deleted in new
chr17	45784279	45835827	chr17:45784279-45835827	1	+	45816558	45834764	789624	12	298,88,120,107,121,154,61,73,86,136,42,1204,	0,22730,32183,44935,45814,46137,46600,48858,49172,49434,49727,50344,
#Partially deleted in new
chr17	45784279	45835827	chr17:45784279-45835827	1	+	45784544	45830532	789624	11	298,88,107,121,154,61,73,86,136,42,1204,	0,22730,44935,45814,46137,46600,48858,49172,49434,49727,50344,
#Partially deleted in new
chr17	45784306	45835825	chr17:45784306-45835825	0	+	45784544	45830182	789624	13	271,88,120,86,107,36,154,61,73,86,136,42,1202,	0,22703,32156,37048,44908,45872,46110,46573,48831,49145,49407,49700,50317,
#Partially deleted in new
chr17	45784319	45835826	chr17:45784319-45835826	3	+	45784544	45834764	0	13	258,88,120,86,107,121,154,61,73,86,136,42,1203,	0,22690,32143,37035,44895,45774,46097,46560,48818,49132,49394,49687,50304,
#Partially deleted in new
chr17	45784526	45834764	chr17:45784526-45834764	1	+	45784544	45834764	0	12	51,88,86,107,121,154,61,73,86,136,42,141,	0,22483,36828,44688,45567,45890,46353,48611,48925,49187,49480,50097,
#Partially deleted in new
chr17	45784544	45835828	chr17:45784544-45835828	1	+	45784544	45834764	0	14	33,88,120,86,107,87,121,154,61,73,86,136,42,1205,	0,22465,31918,36810,44670,45016,45549,45872,46335,48593,48907,49169,49462,50079,
#Partially deleted in new
chr17	45784544	45834764	chr17:45784544-45834764	1	+	45784544	45834764	0	12	33,88,120,86,107,121,154,61,73,86,136,141,	0,22465,31918,36810,44670,45549,45872,46335,48593,48907,49169,50079,
#Partially deleted in new
chr17	45784568	45830940	chr17:45784568-45830940	0	+	45784568	45784568	8553170	6	9,88,86,107,477,61,	0,22441,36786,44646,45525,46311,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	45799389	45895630	chr17:45799389-45895630	3	-	45799389	45799389	8553170	7	527,513,1557,262,171,421,151,	0,888,26193,28263,29801,44351,96090,
#Partially deleted in new
chr17	45807073	45830125	chr17:45807073-45830125	0	+	45807073	45825536	789624	6	24,120,86,110,107,32,	0,9389,14281,18412,22141,23020,
#Partially deleted in new
chr17	45816557	45834841	chr17:45816557-45834841	0	+	45816557	45833196	789624	8	25,86,107,121,61,73,86,218,	0,4797,12657,13536,14322,16580,16894,18066,
#Partially deleted in new
chr17	45830399	45833202	chr17:45830399-45833202	0	+	45830399	45830399	8553170	2	541,65,	0,2738,
#Deleted in new
chr17	45833137	45835644	chr17:45833137-45835644	0	+	45833137	45833797	789624	4	73,136,42,1021,	0,576,869,1486,
#Deleted in new
chr17	45833137	45834645	chr17:45833137-45834645	0	+	45833137	45834645	789624	4	73,86,42,22,	0,314,869,1486,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	45841417	45895680	chr17:45841417-45895680	1	-	45841417	45841417	8553170	3	2744,188,201,	0,6093,54062,
#Partially deleted in new
chr17	45843650	45895600	chr17:45843650-45895600	0	-	45843650	45843650	8553170	2	511,121,	0,51829,
#Partially deleted in new
chr17	45843873	45895513	chr17:45843873-45895513	0	-	45843873	45843873	8553170	2	288,902,	0,50738,
#Deleted in new
chr17	45843985	45844757	chr17:45843985-45844757	0	-	45843985	45843985	8553170	2	176,119,	0,653,
#Deleted in new
chr17	45844834	45847072	chr17:45844834-45847072	3	+	45844906	45846961	789624	1	2238,	0,
#Partially deleted in new
chr17	45894381	46028334	chr17:45894381-46028334	3	+	45962337	46024171	0	14	305,150,87,87,66,753,56,198,127,266,93,82,113,4379,	0,67939,77477,80003,83993,88796,92658,95496,97078,102017,115928,119861,124236,129574,
#Partially deleted in new
chr17	45894381	46028334	chr17:45894381-46028334	1	+	45962337	46024171	0	11	305,150,87,66,56,127,266,93,82,113,4379,	0,67939,77477,83993,92658,97078,102017,115928,119861,124236,129574,
#Partially deleted in new
chr17	45894381	46028334	chr17:45894381-46028334	1	+	45962337	46024171	0	15	305,150,87,87,66,753,56,198,127,54,266,93,82,113,4379,	0,67939,77477,80003,83993,88796,92658,95496,97078,99542,102017,115928,119861,124236,129574,
#Partially deleted in new
chr17	45894381	46028334	chr17:45894381-46028334	1	+	45962337	46024171	0	12	305,150,87,87,66,56,127,266,93,82,113,4379,	0,67939,77477,80003,83993,92658,97078,102017,115928,119861,124236,129574,
#Partially deleted in new
chr17	45894381	46028334	chr17:45894381-46028334	1	+	45962337	46024171	0	11	305,150,87,87,66,56,127,266,82,113,4379,	0,67939,77477,80003,83993,92658,97078,102017,119861,124236,129574,
#Partially deleted in new
chr17	45894565	45978425	chr17:45894565-45978425	0	+	45962337	45969211	789624	5	121,150,135,87,51,	0,67755,74599,77293,83809,
#Partially deleted in new
chr17	45894575	46018730	chr17:45894575-46018730	0	+	45894575	45894575	8553170	7	111,150,66,56,127,266,113,	0,67745,83799,92464,96884,101823,124042,
#Partially deleted in new
chr17	45894667	46024183	chr17:45894667-46024183	1	+	45962337	46024171	0	9	19,150,66,56,127,266,82,113,228,	0,67653,83707,92372,96792,101731,119575,123950,129288,
#Partially deleted in new
chr17	45894673	46028334	chr17:45894673-46028334	1	+	45962337	46024171	0	10	13,150,66,56,127,266,93,82,113,4379,	0,67647,83701,92366,96786,101725,115636,119569,123944,129282,
#Deleted in new
chr17	45895782	45898798	chr17:45895782-45898798	3	+	45895782	45895782	789624	1	3016,	0,
#Partially deleted in new
chr17	45907669	45910779	chr17:45907669-45910779	3	-	45907669	45907669	8553170	2	714,45,	0,3065,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	45931805	45932083	chr17:45931805-45932083	3	+	45931805	45931805	8553170	1	278,	0,
#Partially deleted in new
chr17	45962337	46024171	chr17:45962337-46024171	1	+	45962337	46024171	0	14	133,87,87,66,753,56,198,127,54,266,93,82,113,216,	0,9521,12047,16037,20840,24702,27540,29122,31586,34061,47972,51905,56280,61618,
#Partially deleted in new
chr17	45962337	46024171	chr17:45962337-46024171	1	+	45962337	46024171	0	10	133,87,66,56,127,266,93,82,113,216,	0,9521,16037,24702,29122,34061,47972,51905,56280,61618,
#Partially deleted in new
chr17	45962337	46024171	chr17:45962337-46024171	1	+	45962337	46024171	0	10	133,87,87,66,56,127,266,82,113,216,	0,9521,12047,16037,24702,29122,34061,51905,56280,61618,
#Partially deleted in new
chr17	45962337	46024171	chr17:45962337-46024171	1	+	45962337	46024171	0	13	133,87,87,66,753,56,198,127,266,93,82,113,216,	0,9521,12047,16037,20840,24702,27540,29122,34061,47972,51905,56280,61618,
#Partially deleted in new
chr17	45962337	46024171	chr17:45962337-46024171	1	+	45962337	46024171	0	11	133,87,87,66,56,127,266,93,82,113,216,	0,9521,12047,16037,24702,29122,34061,47972,51905,56280,61618,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	45972782	46024431	chr17:45972782-46024431	0	+	45972782	45972782	8553170	7	5658,56,127,266,82,113,476,	0,14257,18677,23616,41460,45835,51173,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	45975491	45980506	chr17:45975491-45980506	0	+	45975491	45975491	8553170	1	5015,	0,
#Deleted in new
chr17	45982865	45983930	chr17:45982865-45983930	0	+	45982865	45982865	8553170	1	1065,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	45985658	45987095	chr17:45985658-45987095	0	+	45985658	45985658	8553170	2	86,56,	0,1381,
#Deleted in new
chr17	45999249	45999694	chr17:45999249-45999694	3	+	45999279	45999666	789624	1	445,	0,
#Partially deleted in new
chr17	46029915	46193198	chr17:46029915-46193198	1	-	46031475	46172143	789624	15	1788,253,113,58,125,149,189,183,172,196,119,102,142,1378,376,	0,2131,3164,3487,4245,8622,9111,9786,20617,36621,37633,52525,64644,140939,162907,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	46029915	46046121	chr17:46029915-46046121	0	-	46029915	46029915	8553170	8	1788,253,113,58,125,149,189,6420,	0,2131,3164,3487,4245,8622,9111,9786,
#Partially deleted in new
chr17	46029915	46223676	chr17:46029915-46223676	1	-	46031475	46172143	789624	15	1788,253,113,58,125,149,189,183,172,196,119,102,142,1378,6,	0,2131,3164,3487,4245,8622,9111,9786,20617,36621,37633,52525,64644,140939,193755,
#Partially deleted in new
chr17	46029915	46225389	chr17:46029915-46225389	3	-	46031475	46172143	789624	16	1788,253,113,58,122,149,189,183,172,196,119,102,142,1378,134,49,	0,2131,3164,3487,4245,8622,9111,9786,20617,36621,37633,52525,64644,140939,193755,195425,
#Partially deleted in new
chr17	46029916	46225367	chr17:46029916-46225367	1	-	46031475	46172143	8553170	15	1787,253,113,58,122,149,183,172,196,119,102,142,1378,134,27,	0,2130,3163,3486,4244,8621,9785,20616,36620,37632,52524,64643,140938,193754,195424,
#Partially deleted in new
chr17	46029916	46193400	chr17:46029916-46193400	1	-	46031475	46172143	789624	14	1787,253,113,58,122,149,183,172,196,119,102,142,1378,578,	0,2130,3163,3486,4244,8621,9785,20616,36620,37632,52524,64643,140938,162906,
#Partially deleted in new
chr17	46029917	46040065	chr17:46029917-46040065	0	-	46029917	46029917	8553170	7	1786,253,113,58,125,149,364,	0,2129,3162,3485,4243,8620,9784,
#Partially deleted in new
chr17	46029955	46192800	chr17:46029955-46192800	1	-	46031475	46172143	789624	15	1748,253,113,58,125,149,189,183,172,196,119,102,142,1378,382,	0,2091,3124,3447,4205,8582,9071,9746,20577,36581,37593,52485,64604,140899,162463,
#Partially deleted in new
chr17	46029984	46225373	chr17:46029984-46225373	1	-	46031475	46172143	8553170	16	1719,121,113,58,125,149,189,183,172,196,119,102,142,1378,134,33,	0,2062,3095,3418,4176,8553,9042,9717,20548,36552,37564,52456,64575,140870,193686,195356,
#Deleted in new
chr17	46031073	46032566	chr17:46031073-46032566	0	-	46031073	46031073	8553170	1	1493,	0,
#Deleted in new
chr17	46031653	46034234	chr17:46031653-46034234	0	-	46031653	46031653	8553170	5	50,253,113,67,74,	0,393,1426,1749,2507,
#Partially deleted in new
chr17	46032116	46039081	chr17:46032116-46039081	0	-	46032116	46039081	789624	6	183,113,58,119,149,55,	0,963,1286,2044,6421,6910,
#Deleted in new
chr17	46032164	46033512	chr17:46032164-46033512	0	-	46032164	46032164	8553170	3	135,113,110,	0,915,1238,
#Deleted in new
chr17	46032185	46035160	chr17:46032185-46035160	0	-	46032185	46032185	8553170	6	114,113,58,125,92,397,	0,894,1217,1975,2183,2578,
#Deleted in new
chr17	46032219	46035132	chr17:46032219-46035132	0	-	46032219	46032219	8553170	5	80,113,58,125,369,	0,860,1183,1941,2544,
#Partially deleted in new
chr17	46032256	46172183	chr17:46032256-46172183	0	-	46032256	46172143	789624	12	43,113,58,125,149,183,172,196,119,102,142,1329,	0,823,1146,1904,6281,7445,18276,34280,35292,50184,62303,138598,
#Deleted in new
chr17	46032267	46034570	chr17:46032267-46034570	0	-	46032267	46032267	8553170	5	32,113,58,122,139,	0,812,1135,1893,2164,
#Deleted in new
chr17	46032294	46035513	chr17:46032294-46035513	0	-	46032294	46032294	8553170	4	5,113,58,1353,	0,785,1108,1866,
#Deleted in new
chr17	46033044	46035924	chr17:46033044-46035924	0	-	46033044	46033044	8553170	3	148,58,1764,	0,358,1116,
#Partially deleted in new
chr17	46033079	46224693	chr17:46033079-46224693	0	-	46033079	46223693	789624	13	113,58,125,149,189,183,172,196,119,102,142,134,133,	0,323,1081,5458,5947,6622,17453,33457,34469,49361,61480,190591,191481,
#Partially deleted in new
chr17	46033098	46039075	chr17:46033098-46039075	0	-	46033098	46033098	8553170	4	94,58,125,538,	0,304,1062,5439,
#Partially deleted in new
chr17	46034168	46050694	chr17:46034168-46050694	0	-	46034168	46050694	789624	4	111,149,183,162,	0,4369,5533,16364,
#Deleted in new
chr17	46035312	46035770	chr17:46035312-46035770	3	+	46035312	46035312	8553170	2	54,250,	0,208,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	46037324	46043101	chr17:46037324-46043101	0	-	46037324	46037324	8553170	2	1362,4075,	0,1702,
#Partially deleted in new
chr17	46038635	46171416	chr17:46038635-46171416	0	-	46038635	46171416	789624	7	51,183,172,196,119,142,562,	0,1066,11897,27901,28913,55924,132219,
#Partially deleted in new
chr17	46039869	46193901	chr17:46039869-46193901	0	-	46039869	46172143	789624	8	15,172,196,119,102,142,1378,152,	0,10663,26667,27679,42571,54690,130985,153880,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	46049398	46225355	chr17:46049398-46225355	0	-	46049398	46049398	8553170	8	1306,196,119,102,142,1378,134,15,	0,17138,18150,33042,45161,121456,174272,175942,
#Partially deleted in new
chr17	46050649	46121338	chr17:46050649-46121338	0	-	46050649	46050649	8553170	6	55,196,119,102,142,15,	0,15887,16899,31791,43910,70674,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	46088427	46094641	chr17:46088427-46094641	0	-	46088427	46088427	8553170	2	253,134,	0,6080,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	46092869	46225361	chr17:46092869-46225361	0	-	46092869	46092869	8553170	4	1832,1378,134,21,	0,77985,130801,132471,
#Partially deleted in new
chr17	46119966	46171223	chr17:46119966-46171223	0	-	46119966	46119966	8553170	2	83,369,	0,50888,
#Partially deleted in new
chr17	46148124	46225367	chr17:46148124-46225367	0	-	46148124	46148124	8553170	5	115,63,1378,134,27,	0,4779,22730,75546,77216,
#Partially deleted in new
chr17	46152903	46225371	chr17:46152903-46225371	0	-	46152903	46152903	8553170	5	63,75,1378,134,31,	0,16627,17951,70767,72437,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	46152903	46225367	chr17:46152903-46225367	0	-	46152903	46152903	8553170	5	63,122,1378,134,27,	0,3870,17951,70767,72437,
#Partially deleted in new
chr17	46170276	46223685	chr17:46170276-46223685	0	-	46170276	46170276	8553170	2	1956,15,	0,53394,
#Partially deleted in new
chr17	46172116	46224902	chr17:46172116-46224902	0	-	46172116	46172143	789624	3	116,134,342,	0,51554,52444,
#Partially deleted in new
chr17	46193575	46196721	chr17:46193575-46196721	3	+	46193575	46193575	789624	2	163,354,	0,2792,
#Partially deleted in new
chr17	46193631	46196537	chr17:46193631-46196537	1	+	46193631	46193631	8553170	2	254,170,	0,2736,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	46196057	46196723	chr17:46196057-46196723	0	+	46196057	46196057	8553170	1	666,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	46215069	46215171	chr17:46215069-46215171	3	-	46215069	46215069	8553170	1	102,	0,
#Deleted in new
chr17	46221185	46225376	chr17:46221185-46225376	0	-	46221185	46221185	8553170	2	2619,36,	0,4155,
#Deleted in new
chr17	46243605	46245044	chr17:46243605-46245044	7	+	46243605	46243605	16724991	1	1439,	0,
#Deleted in new
chr17	46259550	46260606	chr17:46259550-46260606	7	-	46259550	46259550	16724991	1	1056,	0,
#Deleted in new
chr17	46267036	46267519	chr17:46267036-46267519	5	+	46267036	46267036	16724991	1	483,	0,
#Partially deleted in new
chr17	46267411	46268694	chr17:46267411-46268694	7	+	46267411	46267411	16724991	2	107,191,	0,1092,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	46274783	46361764	chr17:46274783-46361764	1	-	46299546	46358397	789624	5	635,140,111,165,89,	0,24742,78036,83466,86892,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	46292732	46337792	chr17:46292732-46337792	1	+	46306289	46337723	789624	14	1297,72,72,72,81,72,75,119,1532,105,50,55,140,118,	0,7061,9905,12776,13496,29589,30220,35659,37717,39819,42812,44563,44696,44942,
#Partially deleted in new
chr17	46295098	46337777	chr17:46295098-46337777	1	+	46295133	46337723	789624	12	2644,72,72,72,81,72,75,119,1532,105,50,103,	0,4695,7539,10410,11130,27223,27854,33293,35351,37453,40446,42576,
#Partially deleted in new
chr17	46295130	46337794	chr17:46295130-46337794	3	+	46295133	46337723	789624	14	2612,72,72,72,81,72,75,119,1532,105,50,55,140,120,	0,4663,7507,10378,11098,27191,27822,33261,35319,37421,40414,42165,42298,42544,
#Partially deleted in new
chr17	46299133	46361745	chr17:46299133-46361745	1	-	46299546	46358397	789624	5	312,140,111,165,70,	0,392,53686,59116,62542,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	46309506	46352882	chr17:46309506-46352882	0	-	46337364	46352882	789624	4	1769,99,266,63,	0,27765,30002,43313,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	46311184	46361797	chr17:46311184-46361797	1	-	46311184	46358397	789624	5	91,76,111,165,122,	0,9311,41635,47065,50491,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	46319678	46319959	chr17:46319678-46319959	3	+	46319678	46319678	8553170	1	281,	0,
#Partially deleted in new
chr17	46330344	46361726	chr17:46330344-46361726	1	-	46330569	46358397	789624	4	254,111,165,51,	0,22475,27905,31331,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	46330452	46361718	chr17:46330452-46361718	1	-	46330577	46358397	789624	5	146,266,111,165,43,	0,9056,22367,27797,31223,
#Partially deleted in new
chr17	46334679	46361732	chr17:46334679-46361732	1	-	46334832	46358397	789624	4	158,111,165,57,	0,18140,23570,26996,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	46339396	46361764	chr17:46339396-46361764	3	-	46339499	46358397	789624	4	378,111,165,89,	0,13423,18853,22279,
#Partially deleted in new
chr17	46372854	46487141	chr17:46372854-46487141	7	+	46372854	46372854	16724991	13	12,86,100,40,167,108,76,156,200,166,75,188,97,	0,33809,36179,39976,46943,49622,50211,52672,83852,102345,103289,103917,114190,
#Partially deleted in new
chr17	46503945	46509339	chr17:46503945-46509339	7	+	46503945	46503945	16724991	4	132,156,94,88,	0,529,3298,5306,
#Partially deleted in new
chr17	46512709	46555650	chr17:46512709-46555650	1	+	46512712	46555579	789624	14	2612,72,72,72,81,72,75,119,1532,105,50,55,140,120,	0,4652,7502,10374,11094,27466,28097,33545,35602,37705,40690,42442,42575,42821,
#Partially deleted in new
chr17	46516701	46579670	chr17:46516701-46579670	1	-	46517114	46576322	789624	5	312,140,111,165,70,	0,392,54057,59473,62899,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	46528684	46579673	chr17:46528684-46579673	1	-	46528851	46576322	789624	4	175,111,165,73,	0,42074,47490,50916,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	46528739	46579671	chr17:46528739-46579671	1	-	46528768	46576322	789624	5	120,76,111,165,71,	0,9611,42019,47435,50861,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	46537533	46537814	chr17:46537533-46537814	3	+	46537533	46537533	8553170	1	281,	0,
#Partially deleted in new
chr17	46547224	46555643	chr17:46547224-46555643	0	+	46547224	46547224	8553170	6	2619,105,50,55,140,113,	0,3190,6175,7927,8060,8306,
#Partially deleted in new
chr17	46548206	46579651	chr17:46548206-46579651	1	-	46548431	46576322	789624	4	254,111,165,51,	0,22552,27968,31394,
#Partially deleted in new
chr17	46552532	46579657	chr17:46552532-46579657	1	-	46552685	46576322	789624	4	158,111,165,57,	0,18226,23642,27068,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	46554043	46579682	chr17:46554043-46579682	3	-	46557355	46576322	789624	4	3587,111,165,82,	0,16715,22131,25557,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	46557252	46559304	chr17:46557252-46559304	0	-	46557252	46557252	8553170	2	378,151,	0,1901,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	46558829	46562795	chr17:46558829-46562795	3	-	46558829	46558829	8553170	2	1856,327,	0,3639,
#Partially deleted in new
chr17	46590668	46757464	chr17:46590668-46757464	3	+	46590775	46755823	789624	21	119,86,100,40,167,108,76,156,200,166,75,188,96,157,134,67,80,135,114,56,1663,	0,33575,35944,39742,46707,49385,49974,52435,83745,102234,103178,103806,114090,120294,123184,135880,138186,159104,160834,164645,165133,
#Partially deleted in new
chr17	46590754	46640696	chr17:46590754-46640696	0	+	46590775	46637423	789624	6	33,86,100,167,108,54,	0,33489,35858,46621,49299,49888,
#Partially deleted in new
chr17	46590759	46630643	chr17:46590759-46630643	0	+	46590759	46590759	8553170	4	28,86,100,233,	0,33484,35853,39651,
#Partially deleted in new
chr17	46591020	46626663	chr17:46591020-46626663	0	+	46624246	46626663	789624	3	227,86,51,	0,33223,35592,
#Partially deleted in new
chr17	46602441	46640147	chr17:46602441-46640147	0	+	46624246	46640147	789624	6	82,86,100,40,167,94,	0,21802,24171,27969,34934,37612,
#Partially deleted in new
chr17	46624035	46756059	chr17:46624035-46756059	1	+	46624246	46755823	789624	20	294,100,40,167,108,76,156,200,166,75,188,96,157,134,67,80,135,114,56,258,	0,2577,6375,13340,16018,16607,19068,50378,68867,69811,70439,80723,86927,89817,102513,104819,125737,127467,131278,131766,
#Partially deleted in new
chr17	46713148	46751583	chr17:46713148-46751583	0	+	46713941	46751583	789624	6	213,134,67,80,135,81,	0,704,13400,15706,36624,38354,
#Deleted in new
chr17	46721581	46722167	chr17:46721581-46722167	7	-	46721581	46721581	16724991	1	586,	0,
#Partially deleted in new
chr17	46726555	46755837	chr17:46726555-46755837	0	+	46726555	46755595	789624	7	60,80,135,114,56,99,36,	0,2299,23217,24947,28758,28943,29246,
#Partially deleted in new
chr17	46762505	46818760	chr17:46762505-46818760	3	-	46768319	46818597	789624	5	2116,488,266,242,243,	0,5806,7277,11162,56012,
#Partially deleted in new
chr17	46773841	46833033	chr17:46773841-46833033	0	-	46773841	46773841	8553170	4	68,106,115,270,	0,47266,57606,58922,
#Deleted in new
chr17	46830594	46833058	chr17:46830594-46833058	0	-	46830594	46830594	8553170	3	324,115,295,	0,853,2169,
#Deleted in new
chr17	46831404	46833154	chr17:46831404-46833154	0	-	46831404	46831404	8553170	2	158,391,	0,1359,
#Partially deleted in new
chr17	46833200	46875146	chr17:46833200-46875146	0	+	46833345	46875146	789624	3	240,257,46,	0,39316,41900,
#Partially deleted in new
chr17	46851585	46876967	chr17:46851585-46876967	3	+	46851638	46876718	789624	4	130,257,266,723,	0,20931,23515,24659,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	46851585	46886730	chr17:46851585-46886730	1	+	46851638	46885119	789624	5	130,257,266,304,1697,	0,20931,23515,24659,33448,
#Deleted in new
chr17	46909741	46911512	chr17:46909741-46911512	3	-	46909741	46909741	8553170	2	425,69,	0,1702,
#Deleted in new
chr17	46921123	46921249	chr17:46921123-46921249	3	+	46921123	46921123	8553170	1	126,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	46923074	46942015	chr17:46923074-46942015	1	+	46923192	46938760	789624	5	147,65,109,133,3417,	0,6445,8024,8992,15524,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	46923080	46966947	chr17:46923080-46966947	0	+	46923192	46963794	789624	8	141,65,109,133,141,106,1343,414,	0,6439,8018,8986,11948,15518,40616,43453,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	46923116	46941635	chr17:46923116-46941635	1	+	46923192	46938760	789624	5	105,65,106,133,3037,	0,6403,7985,8950,15482,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	46923116	46966982	chr17:46923116-46966982	0	+	46923192	46963884	789624	8	105,65,109,133,141,106,1205,449,	0,6403,7982,8950,11912,15482,40718,43417,
#Partially deleted in new
chr17	46923119	46941143	chr17:46923119-46941143	1	+	46923192	46940613	0	7	102,65,109,133,141,106,589,	0,6400,7979,8947,11909,15479,17435,
#Partially deleted in new
chr17	46923119	46939806	chr17:46923119-46939806	1	+	46923192	46938656	789624	6	102,65,109,133,197,1208,	0,6400,7979,8947,11909,15479,
#Partially deleted in new
chr17	46923127	46936801	chr17:46923127-46936801	1	+	46923192	46935280	789624	5	94,65,106,133,1773,	0,6392,7974,8939,11901,
#Partially deleted in new
chr17	46923127	46933245	chr17:46923127-46933245	0	+	46923127	46923127	8553170	2	94,3726,	0,6392,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	46923127	46967000	chr17:46923127-46967000	3	+	46923192	46966724	789624	7	94,65,109,133,141,106,467,	0,6392,7971,8939,11901,15471,43406,
#Partially deleted in new
chr17	46923127	46939953	chr17:46923127-46939953	1	+	46923192	46938760	789624	6	94,65,103,133,141,1355,	0,6392,7977,8939,11901,15471,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	46923127	46966948	chr17:46923127-46966948	0	+	46923192	46964369	789624	7	94,65,109,133,106,696,415,	0,6392,7971,8939,15471,41216,43406,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	46923127	46942020	chr17:46923127-46942020	1	+	46923192	46938760	0	6	94,65,109,133,141,3422,	0,6392,7971,8939,11901,15471,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	46923129	46966960	chr17:46923129-46966960	0	+	46923192	46963884	789624	7	92,65,109,133,106,1205,427,	0,6390,7969,8937,15469,40705,43404,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	46923132	47047154	chr17:46923132-47047154	3	+	46923192	47024702	789624	10	89,65,109,133,141,106,93,72,72,9,	0,6387,7966,8934,11896,15466,43401,101547,104424,124013,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	46923137	46942019	chr17:46923137-46942019	1	+	46938631	46938760	789624	5	84,61,109,133,3421,	0,6386,7961,8929,15461,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	46923137	46966783	chr17:46923137-46966783	0	+	46923192	46964369	789624	8	84,65,109,133,141,106,696,250,	0,6382,7961,8929,11891,15461,41206,43396,
#Partially deleted in new
chr17	46923137	46937696	chr17:46923137-46937696	1	+	46923192	46935280	0	5	84,65,109,133,2668,	0,6382,7961,8929,11891,
#Partially deleted in new
chr17	46923137	46933628	chr17:46923137-46933628	0	+	46923137	46923137	8553170	3	84,65,2530,	0,6382,7961,
#Partially deleted in new
chr17	46923138	46941336	chr17:46923138-46941336	1	+	46923192	46938760	789624	6	83,65,106,133,141,2738,	0,6381,7963,8928,11890,15460,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	46923145	46941600	chr17:46923145-46941600	1	+	46929544	46938760	789624	6	124,65,109,133,141,3002,	0,6374,7953,8921,11883,15453,
#Partially deleted in new
chr17	46923152	46933267	chr17:46923152-46933267	1	+	46923192	46932295	789624	4	69,65,109,1201,	0,6367,7946,8914,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	46923157	46952820	chr17:46923157-46952820	0	+	46923192	46948582	789624	9	64,65,109,133,141,106,92,405,158,	0,6362,7941,8909,11871,15441,25408,25785,29505,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	46923159	46966954	chr17:46923159-46966954	0	+	46923192	46955562	789624	9	62,65,109,133,141,106,212,696,421,	0,6360,7939,8907,11869,15439,32341,41184,43374,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	46923159	46941691	chr17:46923159-46941691	1	+	46923192	46940613	789624	6	62,65,109,133,106,1230,	0,6360,7939,8907,15439,17302,
#Partially deleted in new
chr17	46923159	46964965	chr17:46923159-46964965	0	+	46923159	46923159	8553170	7	62,65,109,133,106,83,622,	0,6360,7939,8907,15439,40537,41184,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	46923159	47049932	chr17:46923159-47049932	0	+	46923159	46923159	8553170	8	62,65,109,133,106,93,119,877,	0,6360,7939,8907,15439,43374,123986,125896,
#Partially deleted in new
chr17	46923159	46936801	chr17:46923159-46936801	1	+	46929544	46935280	789624	5	110,65,109,133,1773,	0,6360,7939,8907,11869,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	46923159	46941606	chr17:46923159-46941606	1	+	46929544	46938760	789624	6	473,65,109,133,141,3008,	0,6360,7939,8907,11869,15439,
#Partially deleted in new
chr17	46923159	46935154	chr17:46923159-46935154	0	+	46923349	46935154	789624	5	228,65,109,133,126,	0,6360,7939,8907,11869,
#Partially deleted in new
chr17	46923160	46933262	chr17:46923160-46933262	1	+	46923192	46932295	789624	4	61,65,103,1196,	0,6359,7944,8906,
#Partially deleted in new
chr17	46923160	46941356	chr17:46923160-46941356	1	+	46923192	46938656	789624	5	61,49,65,106,802,	0,656,6359,15438,17394,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	46923161	46968929	chr17:46923161-46968929	0	+	46923192	46948582	789624	10	60,65,109,133,141,106,92,405,93,221,	0,6358,7937,8905,11867,15437,25404,25781,43372,45547,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	46923162	46966818	chr17:46923162-46966818	0	+	46929544	46963884	789624	8	470,65,109,133,141,106,1205,285,	0,6357,7936,8904,11866,15436,40672,43371,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	46923162	46941728	chr17:46923162-46941728	1	+	46935049	46938760	789624	4	59,65,141,3130,	0,6357,11866,15436,
#Partially deleted in new
chr17	46923163	46940779	chr17:46923163-46940779	1	+	46935049	46938760	789624	6	58,61,109,133,141,2181,	0,6360,7935,8903,11865,15435,
#Partially deleted in new
chr17	46923165	46932242	chr17:46923165-46932242	0	+	46929544	46932242	789624	4	467,65,109,176,	0,6354,7933,8901,
#Partially deleted in new
chr17	46923165	46936621	chr17:46923165-46936621	1	+	46929544	46935280	789624	5	467,65,109,133,1593,	0,6354,7933,8901,11863,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	46923165	46941615	chr17:46923165-46941615	1	+	46935049	46938760	789624	5	56,61,133,141,3017,	0,6358,8901,11863,15433,
#Partially deleted in new
chr17	46923171	46963757	chr17:46923171-46963757	0	+	46923171	46923171	8553170	7	50,124,65,109,133,106,61,	0,337,6348,7927,8895,15427,40525,
#Partially deleted in new
chr17	46923171	46940933	chr17:46923171-46940933	1	+	46929544	46938760	789624	5	461,65,109,133,2335,	0,6348,7927,8895,15427,
#Partially deleted in new
chr17	46923187	46938997	chr17:46923187-46938997	1	+	46929544	46938760	789624	5	82,65,109,133,399,	0,6332,7911,8879,15411,
#Partially deleted in new
chr17	46923197	46935586	chr17:46923197-46935586	1	+	46935049	46935280	789624	5	24,61,109,133,558,	0,6326,7901,8869,11831,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	46929551	46975524	chr17:46929551-46975524	0	+	46929551	46975227	789624	7	33,109,133,141,106,93,326,	0,1547,2515,5477,9047,36982,45647,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	46931110	46966947	chr17:46931110-46966947	0	+	46931110	46964042	789624	5	97,133,106,1038,414,	0,956,7488,32891,35423,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	46931133	46952830	chr17:46931133-46952830	0	+	46931133	46952670	789624	5	74,133,141,106,168,	0,933,3895,7465,21529,
#Partially deleted in new
chr17	46931947	46935534	chr17:46931947-46935534	0	+	46931947	46931947	8553170	2	252,506,	0,3081,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	46938604	46966851	chr17:46938604-46966851	0	+	46938604	46955562	789624	4	100,212,1343,318,	0,16896,25092,27929,
#Deleted in new
chr17	46973016	46973100	chr17:46973016-46973100	3	+	46973016	46973016	5263520	1	84,	0,
#Deleted in new
chr17	46978155	46979248	chr17:46978155-46979248	3	-	46978644	46979007	789624	1	1093,	0,
#Partially deleted in new
chr17	46978480	47049145	chr17:46978480-47049145	7	+	46978480	46978480	16724991	4	291,72,119,90,	0,43369,68665,70575,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	46984044	47067452	chr17:46984044-47067452	3	-	46984044	46984044	8553170	6	25,140,104,83,294,39,	0,37537,49233,50999,72415,83369,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	46998699	47067469	chr17:46998699-47067469	1	-	46998699	46998699	8553170	6	118,140,104,96,294,56,	0,22882,34578,55418,57760,68714,
#Partially deleted in new
chr17	47005617	47021623	chr17:47005617-47021623	1	-	47005617	47005617	8553170	3	167,45,42,	0,2222,15964,
#Partially deleted in new
chr17	47010463	47021666	chr17:47010463-47021666	0	-	47010463	47010463	8553170	2	273,85,	0,11118,
#Partially deleted in new
chr17	47017192	47054569	chr17:47017192-47054569	5	+	47017192	47017192	16724991	9	2608,72,72,72,81,119,1512,105,52,	0,4657,7487,10364,11087,29953,32009,34103,37325,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	47018046	47067537	chr17:47018046-47067537	1	-	47018046	47018046	8553170	5	419,140,104,294,124,	0,3535,15231,38413,49367,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	47041824	47042105	chr17:47041824-47042105	3	+	47041824	47041824	8553170	1	281,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	47056206	47067488	chr17:47056206-47067488	0	-	47056206	47056206	8553170	2	547,75,	0,11207,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	47056608	47100248	chr17:47056608-47100248	1	-	47056608	47056608	8553170	3	145,88,414,	0,15863,43226,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	47071445	47099949	chr17:47071445-47099949	0	-	47071445	47071445	8553170	3	167,88,115,	0,1026,28389,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	47071473	47099941	chr17:47071473-47099941	0	-	47071473	47071473	8553170	3	177,88,107,	0,998,28361,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	47081919	47100239	chr17:47081919-47100239	1	-	47081919	47081919	8553170	2	431,405,	0,17915,
#Partially deleted in new
chr17	47099835	47100323	chr17:47099835-47100323	0	-	47099835	47099835	8553170	2	186,69,	0,419,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr17	47117702	47189266	chr17:47117702-47189266	3	-	47120934	47189172	0	19	3315,157,75,129,118,209,153,173,208,100,113,115,212,155,98,126,148,76,121,	0,4741,6183,11690,14554,19449,21036,24150,24526,26180,34103,36969,39210,39527,40503,52214,54214,63859,71443,
#Partially deleted in new
chr17	47120254	47189176	chr17:47120254-47189176	1	-	47120934	47189172	0	19	763,157,75,129,118,209,153,173,208,100,131,115,212,155,98,126,148,76,31,	0,2189,3631,9138,12002,16897,18484,21598,21974,23628,31551,34417,36658,36975,37951,49662,51662,61307,68891,
#Partially deleted in new
chr17	47120609	47123895	chr17:47120609-47123895	0	-	47122529	47123895	789624	3	408,176,10,	0,1834,3276,
#Partially deleted in new
chr17	47120770	47189251	chr17:47120770-47189251	0	-	47158247	47189172	789624	18	247,157,75,129,118,209,153,173,208,100,113,115,212,155,98,126,76,106,	0,1673,3115,8622,11486,16381,17968,21082,21458,23112,31035,33901,36142,36459,37435,49146,60791,68375,
#Partially deleted in new
chr17	47120809	47137244	chr17:47120809-47137244	0	-	47122461	47137244	789624	6	208,93,75,129,118,93,	0,1634,3076,8583,11447,16342,
#Partially deleted in new
chr17	47120879	47189224	chr17:47120879-47189224	1	-	47120934	47189172	789624	19	138,157,75,129,118,209,153,170,208,100,113,115,212,155,98,126,148,76,79,	0,1564,3006,8513,11377,16272,17859,20973,21349,23003,30926,33792,36033,36350,37326,49037,51037,60682,68266,
#Partially deleted in new
chr17	47122551	47189264	chr17:47122551-47189264	0	-	47132299	47189172	789624	12	49,75,129,118,115,212,155,98,126,148,76,119,	0,1334,6841,9705,32120,34361,34678,35654,47365,49365,59010,66594,
#Partially deleted in new
chr17	47137151	47142381	chr17:47137151-47142381	0	-	47139955	47142381	789624	5	209,153,203,170,153,	0,1587,2619,4701,5077,
#Partially deleted in new
chr17	47141843	47189261	chr17:47141843-47189261	0	-	47141843	47141843	8553170	11	182,100,131,115,212,155,98,126,148,76,116,	0,2039,9962,12828,15069,15386,16362,28073,30073,39718,47302,
#Partially deleted in new
chr17	47142427	47169977	chr17:47142427-47169977	0	-	47154766	47169977	789624	6	9,100,131,115,98,61,	0,1455,9378,12244,15778,27489,
#Partially deleted in new
chr17	47151813	47157267	chr17:47151813-47157267	0	-	47154803	47157267	789624	4	105,193,212,38,	0,2858,5099,5416,
#Partially deleted in new
chr17	47154697	47181605	chr17:47154697-47181605	0	-	47158247	47181605	789624	6	89,71,155,98,126,44,	0,2215,2532,3508,15219,26864,
#Partially deleted in new
chr17	47154754	47172047	chr17:47154754-47172047	0	-	47157380	47172047	789624	5	32,212,155,126,131,	0,2158,2475,15162,17162,
#Partially deleted in new
chr17	47156912	47189252	chr17:47156912-47189252	0	-	47156912	47189172	789624	7	71,155,98,126,148,76,107,	0,317,1293,13004,15004,24649,32233,
#Partially deleted in new
chr17	47157054	47189261	chr17:47157054-47189261	0	-	47158247	47189172	789624	5	70,155,98,76,116,	0,175,1151,24507,32091,
#Partially deleted in new
chr17	47157059	47188936	chr17:47157059-47188936	0	-	47157059	47157059	8553170	7	65,155,98,126,148,76,191,	0,170,1146,12857,14857,24502,31686,
#Partially deleted in new
chr17	47157229	47189422	chr17:47157229-47189422	0	-	47157229	47157229	8553170	6	155,98,126,148,76,162,	0,976,12687,14687,24332,32031,
#Partially deleted in new
chr17	47159190	47159993	chr17:47159190-47159993	7	-	47159190	47159190	16724991	1	803,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	47160397	47167723	chr17:47160397-47167723	3	-	47160397	47160397	8553170	3	1093,758,22,	0,1227,7304,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	47161074	47162064	chr17:47161074-47162064	0	-	47161074	47161074	8553170	2	59,342,	0,648,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	47169825	47171049	chr17:47169825-47171049	3	+	47169825	47169825	8553170	2	583,90,	0,1134,
#Partially deleted in new
chr17	47181281	47189252	chr17:47181281-47189252	0	-	47181281	47181281	8553170	2	356,107,	0,7864,
#Partially deleted in new
chr17	47200445	47223672	chr17:47200445-47223672	0	+	47209422	47219954	789624	7	141,169,150,174,78,44,164,	0,8943,19458,21236,21934,22568,23063,
#Partially deleted in new
chr17	47209034	47223658	chr17:47209034-47223658	3	+	47209422	47223042	789624	8	57,169,28,150,174,78,44,150,	0,354,4764,10869,12647,13345,13979,14474,
#Partially deleted in new
chr17	47209061	47223678	chr17:47209061-47223678	1	+	47209422	47223042	789624	8	94,169,28,150,174,78,44,170,	0,327,4737,10842,12620,13318,13952,14447,
#Partially deleted in new
chr17	47209062	47221851	chr17:47209062-47221851	0	+	47209422	47219954	789624	4	93,169,150,170,	0,326,10841,12619,
#Partially deleted in new
chr17	47209065	47223038	chr17:47209065-47223038	0	+	47209422	47223038	789624	7	26,169,28,150,174,78,25,	0,323,4733,10838,12616,13314,13948,
#Partially deleted in new
chr17	47209065	47222409	chr17:47209065-47222409	0	+	47209422	47222409	789624	6	90,169,28,150,174,30,	0,323,4733,10838,12616,13314,
#Partially deleted in new
chr17	47209341	47223057	chr17:47209341-47223057	0	+	47209422	47221766	789624	6	216,28,150,124,78,44,	0,4457,10562,12390,13038,13672,
#Partially deleted in new
chr17	47209347	47223679	chr17:47209347-47223679	1	+	47209422	47223042	789624	7	210,28,150,174,78,44,171,	0,4451,10556,12334,13032,13666,14161,
#Partially deleted in new
chr17	47209399	47221796	chr17:47209399-47221796	0	+	47209422	47221796	789624	4	158,121,150,115,	0,4399,10504,12282,
#Partially deleted in new
chr17	47220029	47223477	chr17:47220029-47223477	0	+	47220029	47223042	789624	4	24,174,78,464,	0,1652,2350,2984,
#Partially deleted in new
chr17	47253845	47311816	chr17:47253845-47311816	3	+	47253861	47310204	0	15	95,86,196,253,163,162,96,90,135,430,223,101,120,167,1678,	0,20573,29508,30597,32414,33224,35835,36339,37108,38293,45462,46632,48875,53625,56293,
#Partially deleted in new
chr17	47253852	47291487	chr17:47253852-47291487	1	+	47253861	47291160	789624	9	88,86,196,253,163,162,96,90,534,	0,20566,29501,30590,32407,33217,35828,36332,37101,
#Partially deleted in new
chr17	47253896	47344292	chr17:47253896-47344292	3	+	47253896	47328364	789624	18	44,86,196,253,163,162,96,90,135,430,223,101,120,167,115,161,112,131,	0,20522,29457,30546,32363,33173,35784,36288,37057,38242,45411,46581,48824,53574,74372,81299,88024,90265,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	47259357	47259420	chr17:47259357-47259420	3	-	47259357	47259357	8553170	1	63,	0,
#Deleted in new
chr17	47279525	47280047	chr17:47279525-47280047	3	-	47279525	47279525	8553170	1	522,	0,
#Partially deleted in new
chr17	47291052	47292171	chr17:47291052-47292171	0	+	47291052	47291160	789624	2	375,33,	0,1086,
#Partially deleted in new
chr17	47303459	47305685	chr17:47303459-47305685	0	-	47303459	47303459	8553170	2	323,164,	0,2062,
#Partially deleted in new
chr17	47303473	47323613	chr17:47303473-47323613	3	-	47303473	47303473	789624	3	309,149,77,	0,14998,20063,
#Partially deleted in new
chr17	47323289	47328371	chr17:47323289-47328371	0	+	47328353	47328371	8553170	2	252,103,	0,4979,
#Partially deleted in new
chr17	47323527	47335276	chr17:47323527-47335276	0	+	47328353	47335276	789624	4	215,162,115,81,	0,2698,4741,11668,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	47323775	47374639	chr17:47323775-47374639	0	+	47345025	47374639	789624	11	157,70,162,115,246,161,112,131,83,72,168,	0,678,2450,4493,5017,11420,18145,20386,21240,46661,50696,
#Partially deleted in new
chr17	47323960	47342027	chr17:47323960-47342027	0	+	47323960	47323960	8553170	5	114,70,162,115,107,	0,493,2265,4308,17960,
#Partially deleted in new
chr17	47323980	47441312	chr17:47323980-47441312	3	+	47328353	47440714	789624	25	94,70,162,115,161,112,131,83,144,144,72,495,138,72,144,75,144,72,144,72,45,144,72,144,882,	0,473,2245,4288,11215,17940,20181,21035,23827,37397,46456,50491,53785,55201,67456,70044,71853,78151,79897,80581,85666,88792,90867,105837,116450,
#Partially deleted in new
chr17	47324024	47430710	chr17:47324024-47430710	1	+	47328353	47429966	789624	22	50,70,162,115,161,112,131,83,72,495,138,72,144,75,144,72,144,72,45,144,72,893,	0,429,2201,4244,11171,17896,20137,20991,46412,50447,53741,55157,67412,70000,71809,78107,79853,80537,85622,88748,90823,105793,
#Partially deleted in new
chr17	47324024	47335326	chr17:47324024-47335326	0	+	47328353	47335326	789624	5	75,70,162,115,131,	0,429,2201,4244,11171,
#Partially deleted in new
chr17	47326338	47396021	chr17:47326338-47396021	0	+	47326338	47326338	8553170	14	49,115,161,112,131,83,144,72,495,138,72,144,75,188,	0,1930,8857,15582,17823,18677,35039,44098,48133,51427,52843,65098,67686,69495,
#Partially deleted in new
chr17	47329850	47340088	chr17:47329850-47340088	0	+	47329850	47329850	8553170	3	55,161,233,	0,5345,10005,
#Partially deleted in new
chr17	47369615	47374638	chr17:47369615-47374638	0	+	47369615	47369615	8553170	3	309,72,167,	0,821,4856,
#Partially deleted in new
chr17	47377653	47394099	chr17:47377653-47394099	0	+	47377653	47377653	8553170	4	250,72,144,75,	0,1528,13783,16371,
#Partially deleted in new
chr17	47377815	47414975	chr17:47377815-47414975	0	+	47377815	47414927	789624	6	88,72,144,75,144,128,	0,1366,13621,16209,18018,37032,
#Partially deleted in new
chr17	47409321	47423526	chr17:47409321-47423526	3	-	47409321	47409321	8553170	2	348,165,	0,14040,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	47450567	47492492	chr17:47450567-47492492	7	-	47450567	47450567	16724991	6	311,110,99,130,178,99,	0,6116,32424,39598,40447,41826,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	47455105	47492470	chr17:47455105-47492470	4	-	47455105	47455105	16724991	7	1049,110,99,122,130,178,77,	0,1578,27886,31657,35060,35909,37288,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	47455367	47490218	chr17:47455367-47490218	4	-	47455367	47455367	16724991	4	542,110,99,53,	0,1316,27624,34798,
#Partially deleted in new
chr17	47482991	47492459	chr17:47482991-47492459	5	-	47482991	47482991	16724991	4	99,130,178,66,	0,7174,8023,9402,
#Partially deleted in new
chr17	47522941	47582844	chr17:47522941-47582844	0	+	47522986	47582844	789624	6	122,139,85,78,122,103,	0,8475,22967,46475,56448,59800,
#Partially deleted in new
chr17	47522944	47592545	chr17:47522944-47592545	0	+	47522944	47522944	8553170	13	119,85,78,116,122,108,201,97,34,115,165,105,61,	0,22964,46472,54100,56445,59797,62555,63203,63420,64285,67772,69011,69540,
#Partially deleted in new
chr17	47522951	47579426	chr17:47522951-47579426	0	+	47522951	47522951	8553170	6	112,166,85,78,80,37,	0,8438,22957,46465,54129,56438,
#Partially deleted in new
chr17	47522956	47622006	chr17:47522956-47622006	1	+	47522986	47621920	789624	24	107,166,85,78,122,108,201,97,34,115,165,105,61,110,64,140,135,220,143,57,108,156,48,239,	0,8433,22952,46460,56433,59785,62543,63191,63408,64273,67760,68999,69528,73396,76719,78651,80958,82376,89503,90712,95393,96052,96780,98811,
#Partially deleted in new
chr17	47522967	47582772	chr17:47522967-47582772	0	+	47522986	47569417	789624	8	96,166,85,76,78,80,66,31,	0,8422,22941,36644,46449,54113,56422,59774,
#Partially deleted in new
chr17	47522976	47582798	chr17:47522976-47582798	0	+	47522986	47579404	789624	7	87,166,85,78,116,122,57,	0,8413,22932,46440,54068,56413,59765,
#Partially deleted in new
chr17	47531063	47623276	chr17:47531063-47623276	3	+	47531300	47621920	789624	23	492,85,78,122,108,201,97,34,115,165,105,61,110,64,140,135,220,143,57,108,156,48,1509,	0,14845,38353,48326,51678,54436,55084,55301,56166,59653,60892,61421,65289,68612,70544,72851,74269,81396,82605,87286,87945,88673,90704,
#Partially deleted in new
chr17	47531215	47577136	chr17:47531215-47577136	0	+	47531215	47531215	8553170	4	340,85,78,56,	0,14693,38201,45865,
#Partially deleted in new
chr17	47531281	47592680	chr17:47531281-47592680	0	+	47531300	47582749	789624	12	274,85,78,66,108,246,97,34,115,165,105,196,	0,14627,38135,48108,51460,54218,54866,55083,55948,59435,60674,61203,
#Partially deleted in new
chr17	47531387	47585507	chr17:47531387-47585507	0	+	47531387	47582621	789624	7	168,85,78,66,120,23,8,	0,14521,38029,48002,51205,51439,54112,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	47548189	47592673	chr17:47548189-47592673	0	+	47548189	47548189	8553170	11	138,78,116,3460,201,97,34,115,165,105,189,	0,21227,28855,31200,37310,37958,38175,39040,42527,43766,44295,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	47557412	47557514	chr17:47557412-47557514	3	+	47557412	47557412	8553170	1	102,	0,
#Partially deleted in new
chr17	47569428	47585943	chr17:47569428-47585943	0	+	47569428	47569428	8553170	4	66,66,108,444,	0,9961,13313,16071,
#Partially deleted in new
chr17	47582797	47585965	chr17:47582797-47585965	0	+	47582797	47582797	8553170	2	52,466,	0,2702,
#Partially deleted in new
chr17	47585713	47592545	chr17:47585713-47592545	0	+	47585713	47585713	8553170	6	32,34,115,165,105,61,	0,651,1516,5003,6242,6771,
#Deleted in new
chr17	47586147	47586661	chr17:47586147-47586661	0	+	47586147	47586147	8553170	2	97,297,	0,217,
#Partially deleted in new
chr17	47586290	47592545	chr17:47586290-47592545	0	+	47586369	47592545	789624	5	108,115,165,105,61,	0,939,4426,5665,6194,
#Partially deleted in new
chr17	47586335	47622117	chr17:47586335-47622117	0	+	47586369	47591978	789624	16	63,115,165,157,61,110,64,140,135,220,143,57,108,156,48,350,	0,894,4381,5568,6149,10017,13340,15272,17579,18997,26124,27333,32014,32673,33401,35432,
#Partially deleted in new
chr17	47586352	47592545	chr17:47586352-47592545	0	+	47586369	47592545	789624	6	46,94,63,165,105,61,	0,308,929,4364,5603,6132,
#Partially deleted in new
chr17	47586522	47592673	chr17:47586522-47592673	0	+	47586522	47586522	8553170	4	822,165,105,189,	0,4194,5433,5962,
#Partially deleted in new
chr17	47587122	47592675	chr17:47587122-47592675	0	+	47587122	47587122	8553170	4	222,165,157,191,	0,3594,4781,5362,
#Partially deleted in new
chr17	47591728	47592664	chr17:47591728-47592664	0	+	47591728	47591728	8553170	2	332,180,	0,756,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	47596066	47601985	chr17:47596066-47601985	0	+	47596066	47596066	8553170	3	396,64,378,	0,3609,5541,
#Partially deleted in new
chr17	47601715	47618429	chr17:47601715-47618429	0	+	47601715	47605495	789624	6	32,135,87,143,57,80,	0,2199,3750,10744,11953,16634,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	47603493	47620214	chr17:47603493-47620214	0	+	47603493	47603493	8553170	6	556,220,143,57,108,1206,	0,1839,8966,10175,14856,15515,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	47603859	47649402	chr17:47603859-47649402	3	-	47603859	47603859	8553170	4	259,81,90,7,	0,22687,32652,45536,
#Partially deleted in new
chr17	47603863	47636550	chr17:47603863-47636550	0	-	47603863	47603863	8553170	2	255,39,	0,32648,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	47618349	47621968	chr17:47618349-47621968	0	+	47618349	47621920	789624	5	108,156,45,48,201,	0,659,928,1387,3418,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	47621841	47649420	chr17:47621841-47649420	1	-	47621841	47621841	8553170	4	246,81,90,25,	0,4705,14670,27554,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	47626005	47649416	chr17:47626005-47649416	1	-	47626005	47626005	8553170	3	622,90,21,	0,10506,23390,
#Partially deleted in new
chr17	47649475	47682633	chr17:47649475-47682633	1	+	47657012	47682404	0	21	402,183,201,153,60,90,111,102,225,192,131,148,72,145,83,108,144,106,115,162,230,	0,3218,7384,9032,11643,13613,14683,15581,18710,20202,21226,23542,24014,25162,26933,27544,28570,28832,30544,31032,32928,
#Partially deleted in new
chr17	47649494	47657023	chr17:47649494-47657023	0	+	47650244	47657023	789624	5	383,107,59,183,164,	0,683,891,3199,7365,
#Partially deleted in new
chr17	47649837	47685505	chr17:47649837-47685505	3	+	47650244	47682404	0	22	447,59,183,201,153,60,90,111,102,225,192,131,148,72,145,83,108,144,106,115,162,3102,	0,548,2856,7022,8670,11281,13251,14321,15219,18348,19840,20864,23180,23652,24800,26571,27182,28208,28470,30182,30670,32566,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	47650151	47662238	chr17:47650151-47662238	0	+	47650151	47650151	8553170	7	133,59,183,201,153,60,70,	0,234,2542,6708,8356,10967,12017,
#Partially deleted in new
chr17	47650357	47658641	chr17:47650357-47658641	0	+	47657012	47658641	789624	4	87,183,201,134,	0,2336,6502,8150,
#Partially deleted in new
chr17	47651195	47682680	chr17:47651195-47682680	1	+	47657012	47682404	0	21	181,183,201,153,60,90,111,102,225,192,131,148,72,145,83,108,144,106,115,162,277,	0,1498,5664,7312,9923,11893,12963,13861,16990,18482,19506,21822,22294,23442,25213,25824,26850,27112,28824,29312,31208,
#Partially deleted in new
chr17	47656924	47682680	chr17:47656924-47682680	0	+	47656924	47682404	789624	17	136,153,60,90,225,192,131,148,72,145,83,108,144,106,115,162,277,	0,1583,4194,6164,11261,12753,13777,16093,16565,17713,19484,20095,21121,21383,23095,23583,25479,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	47668364	47673561	chr17:47668364-47673561	0	+	47668364	47673561	789624	6	46,192,131,153,148,72,	0,1313,2337,3345,4653,5125,
#Partially deleted in new
chr17	47670323	47676486	chr17:47670323-47676486	0	+	47670323	47670323	8553170	6	20,131,148,72,145,78,	0,378,2694,3166,4314,6085,
#Partially deleted in new
chr17	47670376	47674755	chr17:47670376-47674755	0	+	47670376	47670376	8553170	5	81,131,148,72,118,	0,325,2641,3113,4261,
#Partially deleted in new
chr17	47673088	47673839	chr17:47673088-47673839	0	+	47673088	47673088	8553170	2	77,350,	0,401,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	47677047	47678639	chr17:47677047-47678639	0	+	47677047	47677047	8553170	3	80,144,332,	0,998,1260,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	47679879	47682589	chr17:47679879-47682589	0	+	47679879	47679879	8553170	3	255,162,186,	0,628,2524,
#Partially deleted in new
chr17	47680602	47684511	chr17:47680602-47684511	0	+	47680602	47682404	789624	3	67,387,199,	0,1801,3710,
#Deleted in new
chr17	47682416	47682683	chr17:47682416-47682683	3	-	47682416	47682416	8553170	1	267,	0,
#Partially deleted in new
chr17	47694080	47698726	chr17:47694080-47698726	0	+	47696112	47698726	789624	5	114,259,123,105,132,	0,1998,2630,3008,4514,
#Partially deleted in new
chr17	47694618	47698767	chr17:47694618-47698767	0	+	47696112	47698767	789624	5	45,259,123,105,173,	0,1460,2092,2470,3976,
#Partially deleted in new
chr17	47695263	47712050	chr17:47695263-47712050	3	+	47696112	47710626	789624	9	1074,123,105,181,176,62,119,728,1553,	0,1447,1825,3331,4056,4372,13130,13461,15234,
#Partially deleted in new
chr17	47695684	47711490	chr17:47695684-47711490	1	+	47696112	47710577	789624	6	653,123,105,97,39,993,	0,1026,1404,2910,13729,14813,
#Partially deleted in new
chr17	47733243	47746119	chr17:47733243-47746119	3	+	47733454	47745366	789624	6	702,155,122,159,62,1372,	0,9366,9827,10951,11238,11504,
#Partially deleted in new
chr17	47733424	47742806	chr17:47733424-47742806	0	+	47733424	47733424	8553170	2	521,197,	0,9185,
#Partially deleted in new
chr17	47807371	47821770	chr17:47807371-47821770	1	-	47808290	47820278	789624	23	1028,123,127,145,145,79,64,138,248,94,138,96,95,133,93,104,118,111,114,54,126,162,105,	0,1166,1492,1704,1962,3222,3400,5894,6215,7149,7843,8735,9016,9191,9408,9884,10897,11134,11614,12357,12599,12832,14294,
#Partially deleted in new
chr17	47807372	47821834	chr17:47807372-47821834	3	-	47808290	47820278	789624	24	464,209,123,127,145,145,79,64,138,248,94,138,96,95,133,93,104,118,111,114,54,126,162,169,	0,818,1165,1491,1703,1961,3221,3399,5893,6214,7148,7842,8734,9015,9190,9407,9883,10896,11133,11613,12356,12598,12831,14293,
#Partially deleted in new
chr17	47807372	47817001	chr17:47807372-47817001	0	-	47807372	47807372	8553170	11	1027,123,127,145,145,79,64,138,248,1962,439,	0,1165,1491,1703,1961,3221,3399,5893,6214,7148,9190,
#Partially deleted in new
chr17	47807373	47820858	chr17:47807373-47820858	0	-	47814701	47820278	789624	22	1026,123,127,145,145,79,64,138,233,187,138,96,95,133,93,104,118,111,114,54,126,655,	0,1164,1490,1702,1960,3220,3398,5892,6213,7147,7841,8733,9014,9189,9406,9882,10895,11132,11612,12355,12597,12830,
#Partially deleted in new
chr17	47807374	47821780	chr17:47807374-47821780	1	-	47816336	47820278	789624	16	1025,123,127,40,15,376,133,93,104,118,111,114,54,126,162,115,	0,1163,1489,1701,7963,8732,9188,9405,9881,10894,11131,11611,12354,12596,12829,14291,
#Deleted in new
chr17	47808215	47809115	chr17:47808215-47809115	0	-	47808926	47809115	789624	4	184,123,83,40,	0,322,648,860,
#Partially deleted in new
chr17	47815287	47821803	chr17:47815287-47821803	0	-	47815287	47815287	8553170	12	65,376,133,93,104,118,111,114,54,126,162,138,	0,819,1275,1492,1968,2981,3218,3698,4441,4683,4916,6378,
#Deleted in new
chr17	47816265	47816924	chr17:47816265-47816924	0	-	47816265	47816265	8553170	3	217,133,145,	0,297,514,
#Partially deleted in new
chr17	47816586	47819138	chr17:47816586-47819138	0	-	47816586	47816586	8553170	6	109,93,104,118,111,153,	0,193,669,1682,1919,2399,
#Deleted in new
chr17	47819332	47821781	chr17:47819332-47821781	0	-	47819332	47819332	8553170	4	450,126,162,116,	0,638,871,2333,
#Deleted in new
chr17	47819720	47821741	chr17:47819720-47821741	0	-	47819720	47819720	8553170	3	376,162,76,	0,483,1945,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	47823271	47831517	chr17:47823271-47831517	3	-	47824204	47831511	0	5	1187,145,165,170,58,	0,3365,3768,5229,8188,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	47823460	47829673	chr17:47823460-47829673	1	-	47824204	47829220	0	5	998,145,165,170,535,	0,3176,3579,5040,5678,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	47823582	47831530	chr17:47823582-47831530	0	-	47831364	47831511	789624	5	876,145,165,170,220,	0,3054,3457,4918,7728,
#Partially deleted in new
chr17	47826894	47831523	chr17:47826894-47831523	0	-	47826894	47826894	8553170	3	310,170,64,	0,1606,4565,
#Partially deleted in new
chr17	47828307	47831525	chr17:47828307-47831525	0	-	47828307	47828307	8553170	2	363,215,	0,3003,
#Partially deleted in new
chr17	47831626	47837713	chr17:47831626-47837713	3	+	47831989	47837120	789624	8	373,106,109,47,110,70,143,964,	0,473,2798,3726,4039,4406,4706,5123,
#Partially deleted in new
chr17	47831633	47836062	chr17:47831633-47836062	0	+	47831989	47833996	789624	7	366,106,79,109,47,110,30,	0,466,2335,2791,3719,4032,4399,
#Partially deleted in new
chr17	47831690	47836100	chr17:47831690-47836100	0	+	47831989	47834889	789624	7	309,106,109,123,47,110,68,	0,409,2734,3127,3662,3975,4342,
#Partially deleted in new
chr17	47831722	47837228	chr17:47831722-47837228	0	+	47831989	47833996	789624	8	277,106,79,975,110,70,143,479,	0,377,2246,2702,3943,4310,4610,5027,
#Partially deleted in new
chr17	47832170	47835248	chr17:47832170-47835248	0	+	47832170	47832170	8553170	2	35,824,	0,2254,
#Deleted in new
chr17	47837691	47841289	chr17:47837691-47841289	1	-	47838251	47840843	789624	7	759,166,216,200,182,174,82,	0,839,1099,1752,2499,2978,3516,
#Deleted in new
chr17	47837699	47841333	chr17:47837699-47841333	3	-	47837843	47840843	789624	8	303,181,166,216,200,182,174,126,	0,570,831,1091,1744,2491,2970,3508,
#Deleted in new
chr17	47837706	47841173	chr17:47837706-47841173	1	-	47837843	47840867	789624	7	296,181,166,216,200,182,504,	0,563,824,1084,1737,2484,2963,
#Deleted in new
chr17	47837707	47841247	chr17:47837707-47841247	0	-	47838675	47840843	789624	8	295,181,189,216,200,182,174,40,	0,562,823,1083,1736,2483,2962,3500,
#Deleted in new
chr17	47837719	47840850	chr17:47837719-47840850	0	-	47839830	47840843	789624	7	283,181,166,216,415,182,181,	0,550,811,1071,1724,2471,2950,
#Deleted in new
chr17	47837719	47839595	chr17:47837719-47839595	0	-	47837843	47839595	789624	5	283,115,166,216,152,	0,616,811,1071,1724,
#Deleted in new
chr17	47838312	47841265	chr17:47838312-47841265	0	-	47839523	47840843	789624	6	138,166,216,200,174,58,	0,218,478,1131,2357,2895,
#Deleted in new
chr17	47838958	47841104	chr17:47838958-47841104	0	-	47839523	47840843	789624	3	48,200,435,	0,485,1711,
#Deleted in new
chr17	47838960	47839947	chr17:47838960-47839947	0	-	47838960	47838960	8553170	2	46,504,	0,483,
#Deleted in new
chr17	47839458	47841267	chr17:47839458-47841267	0	-	47839458	47840843	789624	4	185,182,174,83,	0,732,1211,1726,
#Deleted in new
chr17	47839660	47841261	chr17:47839660-47841261	0	-	47839660	47839660	8553170	2	1183,54,	0,1547,
#Deleted in new
chr17	47839673	47841223	chr17:47839673-47841223	0	-	47839673	47839673	8553170	3	699,174,39,	0,996,1511,
#Deleted in new
chr17	47839901	47841279	chr17:47839901-47841279	0	-	47839901	47839901	8553170	3	471,174,72,	0,768,1306,
#Partially deleted in new
chr17	47844907	47855874	chr17:47844907-47855874	3	-	47847298	47848429	789624	2	3579,221,	0,10746,
#Deleted in new
chr17	47844913	47851193	chr17:47844913-47851193	1	-	47847298	47848429	789624	2	3573,275,	0,6005,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	47863341	47865190	chr17:47863341-47865190	3	+	47863341	47863341	8553170	2	78,738,	0,1111,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	47879471	47882398	chr17:47879471-47882398	3	-	47879471	47879471	8553170	1	2927,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	47891254	47895812	chr17:47891254-47895812	3	-	47891254	47891254	789624	3	327,59,110,	0,2645,4448,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	47891274	47895769	chr17:47891274-47895769	1	-	47891274	47891274	8553170	2	307,67,	0,4428,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	47891853	47895792	chr17:47891853-47895792	0	-	47891853	47891853	8553170	1	3939,	0,
#Partially deleted in new
chr17	47896149	47928957	chr17:47896149-47928957	3	+	47896286	47927824	789624	7	144,77,975,313,175,194,1234,	0,19162,20006,26812,28769,29198,31574,
#Partially deleted in new
chr17	47896149	47917856	chr17:47896149-47917856	1	+	47915325	47917856	789624	4	144,77,615,72,	0,19162,20006,21635,
#Partially deleted in new
chr17	47896149	47915388	chr17:47896149-47915388	0	+	47896150	47915388	789624	2	188,77,	0,19162,
#Partially deleted in new
chr17	47896181	47916384	chr17:47896181-47916384	0	+	47915325	47916384	789624	4	112,113,77,229,	0,1633,19130,19974,
#Partially deleted in new
chr17	47896235	47916252	chr17:47896235-47916252	0	+	47915325	47916252	789624	5	58,113,136,77,97,	0,1579,18490,19076,19920,
#Partially deleted in new
chr17	47897329	47941389	chr17:47897329-47941389	3	-	47897329	47897329	8553170	4	111,120,120,54,	0,782,21122,44006,
#Partially deleted in new
chr17	47898273	47941410	chr17:47898273-47941410	0	-	47898273	47898273	789624	3	1030,120,75,	0,20178,43062,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	47898784	47941359	chr17:47898784-47941359	1	-	47898784	47898784	8553170	3	1594,120,24,	0,19667,42551,
#Partially deleted in new
chr17	47899630	47941390	chr17:47899630-47941390	0	-	47899630	47899630	8553170	3	748,120,44,	0,18821,41716,
#Partially deleted in new
chr17	47929681	47933106	chr17:47929681-47933106	3	-	47929681	47929681	8553170	3	291,25,19,	0,3290,3406,
#Partially deleted in new
chr17	47941505	47946733	chr17:47941505-47946733	0	+	47943407	47946733	789624	7	97,125,100,54,129,71,120,	0,1800,3110,4053,4355,4817,5108,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	47941522	47949308	chr17:47941522-47949308	3	+	47941675	47946782	0	7	291,125,100,54,129,71,2695,	0,1783,3093,4036,4338,4800,5091,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	47941523	47949113	chr17:47941523-47949113	0	+	47941675	47943345	789624	7	290,88,100,54,129,71,2500,	0,1819,3092,4035,4337,4799,5090,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	47941547	47949287	chr17:47941547-47949287	0	+	47941675	47941894	789624	7	504,125,100,54,129,71,2674,	0,1758,3068,4011,4313,4775,5066,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	47941566	47948272	chr17:47941566-47948272	1	+	47941675	47946782	0	6	247,125,100,54,71,1659,	0,1739,3049,3992,4756,5047,
#Partially deleted in new
chr17	47941570	47947141	chr17:47941570-47947141	1	+	47941675	47946782	0	6	243,125,100,129,71,528,	0,1735,3045,4290,4752,5043,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	47941586	47947808	chr17:47941586-47947808	0	+	47941675	47944687	0	5	227,997,129,71,1195,	0,3029,4274,4736,5027,
#Partially deleted in new
chr17	47941595	47947413	chr17:47941595-47947413	0	+	47941675	47944687	0	6	218,100,54,129,71,800,	0,3020,3963,4265,4727,5018,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	47941600	47947812	chr17:47941600-47947812	0	+	47941600	47941600	8553170	4	213,125,1778,1199,	0,1705,3015,5013,
#Partially deleted in new
chr17	47941617	47946749	chr17:47941617-47946749	0	+	47941675	47944687	0	4	196,100,71,136,	0,2998,4705,4996,
#Partially deleted in new
chr17	47941705	47946788	chr17:47941705-47946788	0	+	47941705	47946782	789624	7	108,125,100,15,129,71,175,	0,1600,2910,3892,4155,4617,4908,
#Partially deleted in new
chr17	47941707	47945989	chr17:47941707-47945989	0	+	47941707	47941707	8553170	5	106,125,100,58,129,	0,1598,2908,3851,4153,
#Partially deleted in new
chr17	47941760	47946717	chr17:47941760-47946717	0	+	47941760	47946717	789624	5	53,125,100,71,104,	0,1545,2855,4562,4853,
#Partially deleted in new
chr17	47941780	47947411	chr17:47941780-47947411	0	+	47941780	47944687	789624	5	33,100,129,71,798,	0,2835,4080,4542,4833,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	47941995	47947407	chr17:47941995-47947407	0	+	47941995	47941995	8553170	7	138,125,100,54,129,71,794,	0,1310,2620,3563,3865,4327,4618,
#Partially deleted in new
chr17	47942008	47946704	chr17:47942008-47946704	0	+	47942008	47942008	8553170	6	43,100,54,129,71,91,	0,2607,3550,3852,4314,4605,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	47945397	47949267	chr17:47945397-47949267	0	+	47945397	47945397	8553170	3	215,71,2654,	0,925,1216,
#Partially deleted in new
chr17	47945423	47974438	chr17:47945423-47974438	0	+	47945423	47945423	8553170	8	21,54,71,111,46,132,101,39,	0,135,899,25189,25938,28095,28507,28976,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	47946801	47948272	chr17:47946801-47948272	0	-	47946801	47946801	8553170	2	54,342,	0,1129,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	47948053	47981736	chr17:47948053-47981736	3	+	47948053	47948053	8553170	15	795,111,46,132,101,49,179,140,145,111,79,89,206,172,300,	0,22559,23308,25465,25877,26346,27105,27460,27815,28658,29778,30775,32539,33109,33383,
#Partially deleted in new
chr17	47951966	47957878	chr17:47951966-47957878	3	-	47952922	47953234	789624	2	1297,222,	0,5690,
#Partially deleted in new
chr17	47967809	47975337	chr17:47967809-47975337	0	+	47970642	47975337	789624	7	120,111,46,132,101,49,179,	0,2803,3552,5709,6121,6590,7349,
#Partially deleted in new
chr17	47970533	47981772	chr17:47970533-47981772	1	+	47970642	47981502	789624	14	190,46,132,101,49,179,140,145,111,79,89,206,172,336,	0,828,2985,3397,3866,4625,4980,5335,6178,7298,8295,10059,10629,10903,
#Partially deleted in new
chr17	47971007	47974409	chr17:47971007-47974409	0	+	47971007	47971007	8553170	4	145,46,513,10,	0,354,2511,3392,
#Partially deleted in new
chr17	47971017	47974556	chr17:47971017-47974556	0	+	47971017	47971017	8553170	5	135,46,178,101,157,	0,344,2501,2913,3382,
#Partially deleted in new
chr17	47971040	47981741	chr17:47971040-47981741	3	+	47971146	47981502	789624	14	112,46,132,101,49,179,140,145,111,79,89,206,172,305,	0,321,2478,2890,3359,4118,4473,4828,5671,6791,7788,9552,10122,10396,
#Partially deleted in new
chr17	47971048	47981741	chr17:47971048-47981741	0	+	47971146	47974428	789624	14	104,46,132,105,49,179,140,145,111,79,89,206,172,305,	0,313,2470,2882,3351,4110,4465,4820,5663,6783,7780,9544,10114,10388,
#Partially deleted in new
chr17	47971049	47974136	chr17:47971049-47974136	0	+	47971049	47971049	8553170	4	103,46,175,206,	0,312,2469,2881,
#Partially deleted in new
chr17	47971075	47975266	chr17:47971075-47975266	0	+	47971075	47971075	8553170	6	77,46,175,101,49,95,	0,286,2443,2855,3324,4096,
#Partially deleted in new
chr17	47971077	47975266	chr17:47971077-47975266	0	+	47971146	47974603	789624	7	75,46,132,101,49,108,49,	0,284,2441,2853,3322,3503,4140,
#Partially deleted in new
chr17	47971103	47981772	chr17:47971103-47981772	0	+	47971103	47971103	8553170	12	49,46,132,101,938,500,111,79,89,206,172,336,	0,258,2415,2827,3296,4410,5608,6728,7725,9489,10059,10333,
#Partially deleted in new
chr17	47971112	47975098	chr17:47971112-47975098	0	+	47971112	47971112	8553170	6	40,46,178,101,49,76,	0,249,2406,2818,3287,3910,
#Partially deleted in new
chr17	47971121	47975524	chr17:47971121-47975524	0	+	47971146	47974428	789624	7	50,46,132,101,49,179,11,	0,240,2397,2809,3278,4037,4392,
#Partially deleted in new
chr17	47971121	47974447	chr17:47971121-47974447	0	+	47973607	47974447	789624	4	286,132,101,48,	0,2397,2809,3278,
#Partially deleted in new
chr17	47971121	47975552	chr17:47971121-47975552	0	+	47971146	47975212	789624	7	31,46,132,101,49,166,39,	0,240,2397,2809,3278,4050,4392,
#Partially deleted in new
chr17	47971121	47973810	chr17:47971121-47973810	0	+	47971121	47971121	8553170	2	286,292,	0,2397,
#Partially deleted in new
chr17	47971121	47974541	chr17:47971121-47974541	0	+	47971121	47971121	8553170	5	31,36,132,101,142,	0,152,2397,2809,3278,
#Partially deleted in new
chr17	47971121	47974031	chr17:47971121-47974031	0	+	47971121	47971121	8553170	4	50,46,175,101,	0,240,2397,2809,
#Partially deleted in new
chr17	47971122	47976771	chr17:47971122-47976771	0	+	47971146	47976771	789624	9	30,46,132,101,49,179,125,145,60,	0,239,2396,2808,3277,4036,4391,4746,5589,
#Partially deleted in new
chr17	47971124	47981768	chr17:47971124-47981768	0	+	47971124	47971124	8553170	13	28,46,132,101,938,140,145,111,79,89,206,172,332,	0,237,2394,2806,3275,4389,4744,5587,6707,7704,9468,10038,10312,
#Partially deleted in new
chr17	47971126	47981772	chr17:47971126-47981772	0	+	47971126	47971126	8553170	13	26,46,132,101,938,500,111,79,89,206,172,23,186,	0,235,2392,2804,3273,4387,5585,6705,7702,9466,10036,10310,10460,
#Partially deleted in new
chr17	47971131	47974789	chr17:47971131-47974789	0	+	47971131	47971131	8553170	5	40,46,132,101,390,	0,230,2387,2799,3268,
#Partially deleted in new
chr17	47971134	47974681	chr17:47971134-47974681	0	+	47971146	47971293	789624	5	175,132,101,49,101,	0,2384,2796,3265,3446,
#Partially deleted in new
chr17	47971142	47975631	chr17:47971142-47975631	0	+	47971142	47971142	8553170	6	265,132,101,49,166,118,	0,2376,2788,3257,4029,4371,
#Partially deleted in new
chr17	47971150	47974575	chr17:47971150-47974575	0	+	47971150	47971150	8553170	4	159,175,101,176,	0,2368,2780,3249,
#Partially deleted in new
chr17	47971150	47975650	chr17:47971150-47975650	0	+	47974025	47975650	789624	6	257,178,101,49,179,137,	0,2368,2780,3249,4008,4363,
#Partially deleted in new
chr17	47971155	47981734	chr17:47971155-47981734	0	+	47973607	47974428	789624	13	252,132,105,49,179,140,145,111,79,89,206,172,298,	0,2363,2775,3244,4003,4358,4713,5556,6676,7673,9437,10007,10281,
#Partially deleted in new
chr17	47971164	47973855	chr17:47971164-47973855	0	+	47971164	47971164	8553170	2	145,337,	0,2354,
#Partially deleted in new
chr17	47971210	47974561	chr17:47971210-47974561	0	+	47971210	47971210	8553170	4	197,178,101,162,	0,2308,2720,3189,
#Partially deleted in new
chr17	47971361	47981757	chr17:47971361-47981757	0	+	47971361	47974428	789624	13	46,132,105,49,179,140,145,111,79,83,206,172,321,	0,2157,2569,3038,3797,4152,4507,5350,6470,7473,9231,9801,10075,
#Partially deleted in new
chr17	47971361	47981742	chr17:47971361-47981742	0	+	47971361	47971361	8553170	11	46,132,105,938,500,111,79,89,206,172,306,	0,2157,2569,3038,4152,5350,6470,7467,9231,9801,10075,
#Deleted in new
chr17	47973658	47974583	chr17:47973658-47974583	0	+	47973658	47973658	8553170	2	373,184,	0,741,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	47976460	47980709	chr17:47976460-47980709	0	+	47976460	47976460	8553170	4	362,79,89,117,	0,1371,2368,4132,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	47976627	47978051	chr17:47976627-47978051	0	+	47976627	47976627	8553170	2	195,220,	0,1204,
#Partially deleted in new
chr17	47976721	47981768	chr17:47976721-47981768	0	+	47976721	47981734	789624	7	101,79,89,206,172,23,182,	0,1110,2107,3871,4441,4715,4865,
#Partially deleted in new
chr17	47978549	47981741	chr17:47978549-47981741	0	+	47978549	47978549	8553170	5	177,89,206,172,305,	0,279,2043,2613,2887,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	47979216	47981773	chr17:47979216-47981773	0	+	47979216	47979216	8553170	2	2118,337,	0,2220,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	47980397	47996196	chr17:47980397-47996196	3	-	47980397	47980397	8553170	2	285,246,	0,15553,
#Deleted in new
chr17	47981106	47981774	chr17:47981106-47981774	0	+	47981106	47981106	8553170	2	228,338,	0,330,
#Partially deleted in new
chr17	48026166	48029425	chr17:48026166-48029425	0	-	48026166	48026166	8553170	4	309,114,39,301,	0,1509,2305,2958,
#Partially deleted in new
chr17	48026166	48036902	chr17:48026166-48036902	0	-	48032706	48036902	789624	6	309,39,52,56,82,52,	0,2305,2958,6519,7696,10684,
#Partially deleted in new
chr17	48026166	48036906	chr17:48026166-48036906	0	-	48026427	48036906	789624	7	309,39,52,56,92,82,56,	0,2305,2958,6519,7044,7696,10684,
#Partially deleted in new
chr17	48026166	48033252	chr17:48026166-48033252	0	-	48029158	48033252	789624	5	309,39,52,78,42,	0,2305,2958,5989,7044,
#Partially deleted in new
chr17	48026170	48028560	chr17:48026170-48028560	0	-	48026170	48026170	8553170	2	305,89,	0,2301,
#Partially deleted in new
chr17	48026170	48037782	chr17:48026170-48037782	3	-	48026427	48037777	789624	9	305,39,52,78,56,92,82,75,116,	0,2301,2954,5985,6515,7040,7692,10680,11496,
#Partially deleted in new
chr17	48026173	48033282	chr17:48026173-48033282	0	-	48027735	48033282	789624	7	302,114,39,52,78,56,72,	0,1502,2298,2951,5982,6512,7037,
#Partially deleted in new
chr17	48026181	48037773	chr17:48026181-48037773	0	-	48026181	48026181	8553170	4	294,52,75,107,	0,2943,10669,11485,
#Partially deleted in new
chr17	48031645	48033872	chr17:48031645-48033872	0	-	48032151	48033872	789624	4	588,56,92,10,	0,1040,1565,2217,
#Partially deleted in new
chr17	48033891	48038030	chr17:48033891-48038030	0	-	48033891	48033920	789624	3	53,75,29,	0,2959,4110,
#Deleted in new
chr17	48037160	48037247	chr17:48037160-48037247	3	-	48037160	48037160	5263520	1	87,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	48045140	48048050	chr17:48045140-48048050	0	-	48045140	48045140	8553170	1	2910,	0,
#Deleted in new
chr17	48046880	48048073	chr17:48046880-48048073	3	-	48046880	48046880	8553170	2	90,449,	0,744,
#Partially deleted in new
chr17	48048328	48051146	chr17:48048328-48051146	0	+	48051118	48051146	789624	2	28,540,	0,2278,
#Partially deleted in new
chr17	48048358	48061480	chr17:48048358-48061480	3	+	48051118	48059641	789624	6	104,1022,213,90,159,3186,	0,2248,8027,8673,8985,9936,
#Partially deleted in new
chr17	48048358	48051366	chr17:48048358-48051366	0	+	48051118	48051366	789624	3	104,175,250,	0,2248,2758,
#Partially deleted in new
chr17	48048362	48061487	chr17:48048362-48061487	1	+	48051118	48059641	789624	6	100,213,512,213,159,3193,	0,2244,2754,8023,8981,9932,
#Partially deleted in new
chr17	48048369	48061479	chr17:48048369-48061479	1	+	48051118	48059641	789624	5	93,1022,213,159,3185,	0,2237,8016,8974,9925,
#Partially deleted in new
chr17	48048477	48051072	chr17:48048477-48051072	0	+	48048477	48048477	8553170	2	71,466,	0,2129,
#Partially deleted in new
chr17	48048606	48051041	chr17:48048606-48051041	0	+	48048606	48048606	8553170	2	42,435,	0,2000,
#Partially deleted in new
chr17	48048772	48061480	chr17:48048772-48061480	1	+	48051118	48059641	789624	6	92,1022,180,90,159,3186,	0,1834,7646,8259,8571,9522,
#Partially deleted in new
chr17	48048781	48051074	chr17:48048781-48051074	0	+	48048781	48048781	8553170	2	96,468,	0,1825,
#Partially deleted in new
chr17	48048782	48051097	chr17:48048782-48051097	0	+	48048782	48048782	8553170	2	65,491,	0,1824,
#Partially deleted in new
chr17	48048783	48051416	chr17:48048783-48051416	0	+	48051118	48051416	789624	3	81,175,300,	0,1823,2333,
#Partially deleted in new
chr17	48049131	48051129	chr17:48049131-48051129	0	+	48051118	48051129	8553170	2	29,523,	0,1475,
#Deleted in new
chr17	48054327	48056444	chr17:48054327-48056444	0	+	48055018	48056444	789624	3	92,221,59,	0,602,2058,
#Deleted in new
chr17	48054327	48058342	chr17:48054327-48058342	0	+	48057481	48058342	789624	4	92,213,159,48,	0,2058,3016,3967,
#Deleted in new
chr17	48054480	48058461	chr17:48054480-48058461	0	+	48057481	48058461	789624	4	23,213,159,167,	0,1905,2863,3814,
#Deleted in new
chr17	48054549	48058331	chr17:48054549-48058331	0	+	48057481	48058331	789624	5	89,213,90,159,37,	0,1836,2482,2794,3745,
#Deleted in new
chr17	48054586	48056588	chr17:48054586-48056588	0	+	48055018	48056588	789624	3	52,221,203,	0,343,1799,
#Deleted in new
chr17	48054674	48059833	chr17:48054674-48059833	1	+	48054725	48059641	789624	4	87,213,159,1539,	0,1711,2669,3620,
#Deleted in new
chr17	48054691	48059936	chr17:48054691-48059936	1	+	48054725	48059641	789624	4	70,180,159,1642,	0,1727,2652,3603,
#Deleted in new
chr17	48054709	48059653	chr17:48054709-48059653	1	+	48055018	48059641	789624	4	441,213,159,1359,	0,1676,2634,3585,
#Deleted in new
chr17	48054919	48058307	chr17:48054919-48058307	0	+	48055018	48058307	789624	4	231,180,159,13,	0,1499,2424,3375,
#Deleted in new
chr17	48055951	48058416	chr17:48055951-48058416	0	+	48057481	48058416	789624	4	89,213,159,122,	0,434,1392,2343,
#Deleted in new
chr17	48058876	48060050	chr17:48058876-48060050	0	+	48058876	48059971	789624	2	348,133,	0,1041,
#Deleted in new
chr17	48060382	48060669	chr17:48060382-48060669	3	-	48060382	48060382	8553170	2	78,114,	0,173,
#Deleted in new
chr17	48066703	48067293	chr17:48066703-48067293	3	-	48066703	48066703	8553170	1	590,	0,
#Partially deleted in new
chr17	48070051	48101521	chr17:48070051-48101521	3	-	48071434	48077004	0	5	1528,95,178,177,254,	0,4954,5949,6813,31216,
#Partially deleted in new
chr17	48070051	48101198	chr17:48070051-48101198	1	-	48071434	48077004	0	5	1528,95,178,177,444,	0,4954,5949,6813,30703,
#Partially deleted in new
chr17	48071498	48101302	chr17:48071498-48101302	0	-	48071498	48077004	789624	5	81,95,190,177,35,	0,3507,4490,5366,29769,
#Partially deleted in new
chr17	48074925	48101287	chr17:48074925-48101287	1	-	48075001	48077004	789624	4	175,178,177,20,	0,1075,1939,26342,
#Partially deleted in new
chr17	48075088	48100582	chr17:48075088-48100582	0	-	48075088	48077004	789624	5	12,178,177,125,52,	0,912,1776,20626,25442,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	48088677	48088784	chr17:48088677-48088784	3	-	48088677	48088677	8553170	1	107,	0,
#Partially deleted in new
chr17	48103356	48119164	chr17:48103356-48119164	0	+	48112043	48119164	789624	6	33,55,87,101,96,191,	0,8674,9217,9944,15347,15617,
#Partially deleted in new
chr17	48107548	48122135	chr17:48107548-48122135	1	+	48119079	48121508	789624	5	290,101,96,213,901,	0,5752,11155,11425,13686,
#Partially deleted in new
chr17	48107548	48121808	chr17:48107548-48121808	1	+	48112093	48121508	0	7	48,81,87,101,96,213,574,	0,4482,5025,5752,11155,11425,13686,
#Partially deleted in new
chr17	48107557	48123074	chr17:48107557-48123074	3	+	48112043	48121508	0	8	281,60,55,87,101,96,213,1840,	0,3150,4473,5016,5743,11146,11416,13677,
#Partially deleted in new
chr17	48107559	48112455	chr17:48107559-48112455	0	+	48107559	48107559	8553170	2	279,425,	0,4471,
#Partially deleted in new
chr17	48107575	48121886	chr17:48107575-48121886	0	+	48112043	48118715	789624	7	263,60,55,87,96,213,652,	0,3132,4455,4998,11128,11398,13659,
#Partially deleted in new
chr17	48107584	48122743	chr17:48107584-48122743	1	+	48112043	48121508	0	7	254,55,87,101,96,213,1509,	0,4446,4989,5716,11119,11389,13650,
#Partially deleted in new
chr17	48107787	48121887	chr17:48107787-48121887	1	+	48112093	48121508	0	7	51,81,87,101,96,213,653,	0,4243,4786,5513,10916,11186,13447,
#Partially deleted in new
chr17	48107893	48121458	chr17:48107893-48121458	0	+	48112043	48121458	789624	8	86,60,55,87,101,96,213,224,	0,2814,4137,4680,5407,10810,11080,13341,
#Partially deleted in new
chr17	48111948	48119179	chr17:48111948-48119179	0	+	48112043	48119179	789624	5	137,87,101,96,206,	0,625,1352,6755,7025,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	48112565	48113563	chr17:48112565-48113563	0	+	48112565	48112565	8553170	2	95,263,	0,735,
#Partially deleted in new
chr17	48133439	48430190	chr17:48133439-48430190	3	-	48137235	48430120	0	13	377,109,101,51,195,64,125,84,78,102,26,106,116,	0,3789,29029,37169,46614,48954,51283,54403,55983,212465,230349,263240,296635,
#Partially deleted in new
chr17	48133444	48430275	chr17:48133444-48430275	0	-	48231870	48430120	789624	14	372,109,98,51,195,64,125,84,78,76,102,26,106,201,	0,3784,29024,37164,46609,48949,51278,54398,55978,98382,212460,230344,263235,296630,
#Partially deleted in new
chr17	48133445	48162670	chr17:48133445-48162670	0	-	48133445	48133445	8553170	3	371,109,202,	0,3783,29023,
#Partially deleted in new
chr17	48133445	48137334	chr17:48133445-48137334	0	-	48137235	48137334	789624	3	371,86,106,	0,3029,3783,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	48136937	48430219	chr17:48136937-48430219	1	-	48137235	48430120	0	12	400,101,51,195,64,125,84,78,102,26,106,145,	0,25531,33671,43116,45456,47785,50905,52485,208967,226851,259742,293137,
#Partially deleted in new
chr17	48137228	48346005	chr17:48137228-48346005	0	-	48182443	48346005	789624	8	109,101,51,195,64,84,78,101,	0,25240,33380,42825,45165,50614,52194,208676,
#Deleted in new
chr17	48156426	48156511	chr17:48156426-48156511	3	-	48156426	48156426	5263520	1	85,	0,
#Deleted in new
chr17	48180091	48185179	chr17:48180091-48185179	0	-	48180091	48184800	789624	3	157,64,457,	0,2302,4631,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	48180107	48345965	chr17:48180107-48345965	0	-	48248973	48345965	789624	7	141,64,125,84,78,143,61,	0,2286,4615,7735,9315,68779,165797,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	48185937	48204529	chr17:48185937-48204529	3	+	48185937	48185937	8553170	3	81,68,538,	0,17726,18054,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	48196679	48196786	chr17:48196679-48196786	3	-	48196679	48196679	8553170	1	107,	0,
#Partially deleted in new
chr17	48294334	48307666	chr17:48294334-48307666	3	+	48294334	48294334	8553170	4	9,18,150,336,	0,12,31,12996,
#Partially deleted in new
chr17	48294346	48307829	chr17:48294346-48307829	0	+	48294346	48294346	789624	2	169,499,	0,12984,
#Partially deleted in new
chr17	48294374	48307700	chr17:48294374-48307700	1	+	48294374	48294374	789624	3	141,60,370,	0,1171,12956,
#Deleted in new
chr17	48307327	48308762	chr17:48307327-48308762	1	+	48307327	48307327	8553170	2	72,830,	0,605,
#Partially deleted in new
chr17	48377261	48380370	chr17:48377261-48380370	3	-	48377261	48377261	8553170	2	145,188,	0,2921,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	48460369	48466040	chr17:48460369-48466040	3	+	48460369	48460369	8553170	2	107,594,	0,5077,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	48479096	48479198	chr17:48479096-48479198	3	+	48479096	48479096	8553170	1	102,	0,
#Deleted in new
chr17	48528525	48530997	chr17:48528525-48530997	1	-	48529546	48530904	0	2	1350,670,	0,1802,
#Deleted in new
chr17	48528525	48531001	chr17:48528525-48531001	3	-	48529546	48530904	0	2	1350,674,	0,1802,
#Deleted in new
chr17	48529496	48530910	chr17:48529496-48530910	1	-	48530205	48530904	0	1	1414,	0,
#Deleted in new
chr17	48540893	48543146	chr17:48540893-48543146	0	-	48540893	48540893	8553170	2	738,192,	0,2061,
#Deleted in new
chr17	48542654	48544989	chr17:48542654-48544989	3	-	48543067	48544911	789624	2	1093,469,	0,1866,
#Deleted in new
chr17	48543158	48543909	chr17:48543158-48543909	0	-	48543158	48543158	8553170	2	589,36,	0,715,
#Deleted in new
chr17	48543550	48546087	chr17:48543550-48546087	1	+	48543550	48543550	8553170	2	87,593,	0,1944,
#Deleted in new
chr17	48544350	48551250	chr17:48544350-48551250	3	+	48544350	48544350	789624	7	62,237,70,89,58,63,227,	0,770,1144,4024,5538,5989,6673,
#Deleted in new
chr17	48545508	48551076	chr17:48545508-48551076	0	+	48545508	48545508	8553170	5	56,89,58,63,148,	0,2866,4380,4831,5420,
#Deleted in new
chr17	48546691	48551248	chr17:48546691-48551248	0	+	48546691	48546691	8553170	5	48,89,58,63,320,	0,1683,3197,3648,4237,
#Deleted in new
chr17	48548869	48553922	chr17:48548869-48553922	1	-	48550333	48552474	789624	2	2312,1896,	0,3157,
#Partially deleted in new
chr17	48549629	48602332	chr17:48549629-48602332	3	+	48549629	48549629	8553170	4	19,58,99,258,	0,259,50817,52445,
#Partially deleted in new
chr17	48549811	48590241	chr17:48549811-48590241	1	-	48550333	48552255	789624	4	1370,334,88,117,	0,2215,5719,40313,
#Partially deleted in new
chr17	48549884	48574487	chr17:48549884-48574487	1	-	48550333	48552474	789624	4	1297,606,88,651,	0,2142,5646,23952,
#Partially deleted in new
chr17	48550005	48590272	chr17:48550005-48590272	3	-	48550333	48552474	789624	5	1176,606,88,178,148,	0,2021,5525,23831,40119,
#Partially deleted in new
chr17	48550256	48574023	chr17:48550256-48574023	1	-	48550333	48573885	789624	2	922,187,	0,23580,
#Partially deleted in new
chr17	48550266	48590238	chr17:48550266-48590238	1	-	48550333	48552078	789624	6	915,64,88,178,166,114,	0,1760,5264,23570,24776,39858,
#Partially deleted in new
chr17	48550267	48582622	chr17:48550267-48582622	1	-	48550333	48552255	789624	5	914,334,88,178,331,	0,1759,5263,23569,32024,
#Partially deleted in new
chr17	48550333	48590235	chr17:48550333-48590235	1	-	48550333	48552474	789624	3	848,461,111,	0,1693,39791,
#Deleted in new
chr17	48551140	48556521	chr17:48551140-48556521	0	-	48551140	48552255	789624	4	41,334,88,102,	0,886,4390,5279,
#Partially deleted in new
chr17	48554284	48579357	chr17:48554284-48579357	1	-	48554617	48573885	789624	5	556,88,178,57,64,	0,1246,19552,24122,25009,
#Deleted in new
chr17	48555390	48556943	chr17:48555390-48556943	0	-	48555390	48555390	8553170	2	228,170,	0,1383,
#Deleted in new
chr17	48557261	48560333	chr17:48557261-48560333	3	+	48557261	48557261	8553170	2	97,748,	0,2324,
#Deleted in new
chr17	48573927	48575550	chr17:48573927-48575550	0	-	48573927	48573927	8553170	2	87,508,	0,1115,
#Deleted in new
chr17	48573981	48604912	chr17:48573981-48604912	0	-	48573981	48573981	8553170	2	33,433,	0,30498,
#Deleted in new
chr17	48575512	48580111	chr17:48575512-48580111	3	-	48576721	48578319	789624	2	1508,2249,	0,2350,
#Deleted in new
chr17	48579629	48582259	chr17:48579629-48582259	3	-	48579629	48579629	8553170	1	2630,	0,
#Deleted in new
chr17	48579837	48579947	chr17:48579837-48579947	3	-	48579837	48579837	5263520	1	110,	0,
#Deleted in new
chr17	48590419	48602108	chr17:48590419-48602108	0	+	48590419	48590419	789624	4	170,99,236,34,	0,10027,11008,11655,
#Deleted in new
chr17	48590441	48601921	chr17:48590441-48601921	1	+	48590441	48590441	8553170	3	148,99,494,	0,10005,10986,
#Deleted in new
chr17	48590476	48606393	chr17:48590476-48606393	0	+	48590476	48590476	789624	3	113,120,262,	0,13450,15655,
#Deleted in new
chr17	48590480	48602337	chr17:48590480-48602337	0	+	48590480	48590480	789624	3	109,99,263,	0,9966,11594,
#Deleted in new
chr17	48591256	48593961	chr17:48591256-48593961	3	-	48592208	48593682	789624	2	1200,841,	0,1864,
#Deleted in new
chr17	48592291	48602337	chr17:48592291-48602337	0	+	48592291	48592291	789624	3	73,99,263,	0,8155,9783,
#Deleted in new
chr17	48592312	48602335	chr17:48592312-48602335	0	+	48592312	48592312	789624	2	52,257,	0,9766,
#Deleted in new
chr17	48592319	48606394	chr17:48592319-48606394	0	+	48592319	48592319	789624	3	45,120,263,	0,11607,13812,
#Deleted in new
chr17	48595750	48604992	chr17:48595750-48604992	3	-	48596412	48598150	789624	3	922,525,513,	0,1985,8729,
#Deleted in new
chr17	48595752	48604972	chr17:48595752-48604972	1	-	48596412	48598150	789624	4	920,493,136,111,	0,1983,8727,9109,
#Deleted in new
chr17	48595957	48602332	chr17:48595957-48602332	0	+	48595957	48595957	789624	3	166,99,258,	0,4489,6117,
#Deleted in new
chr17	48595959	48601892	chr17:48595959-48601892	0	+	48595959	48595959	8553170	3	164,99,465,	0,4487,5468,
#Deleted in new
chr17	48595959	48602331	chr17:48595959-48602331	0	+	48595959	48595959	789624	2	164,257,	0,6115,
#Deleted in new
chr17	48595979	48602338	chr17:48595979-48602338	1	+	48595979	48595979	8553170	4	144,99,236,264,	0,4467,5448,6095,
#Deleted in new
chr17	48596438	48606394	chr17:48596438-48606394	1	+	48596438	48596438	8553170	3	139,120,263,	0,7488,9693,
#Deleted in new
chr17	48596527	48597134	chr17:48596527-48597134	0	-	48596527	48596527	8553170	2	145,226,	0,381,
#Deleted in new
chr17	48598210	48604132	chr17:48598210-48604132	0	-	48598210	48598210	8553170	2	50,418,	0,5504,
#Deleted in new
chr17	48602137	48606394	chr17:48602137-48606394	0	+	48602137	48602137	8553170	3	95,120,263,	0,1789,3994,
#Deleted in new
chr17	48602490	48606414	chr17:48602490-48606414	0	+	48602490	48602490	8553170	3	28,120,283,	0,1436,3641,
#Partially deleted in new
chr17	48607226	48611020	chr17:48607226-48611020	3	-	48607841	48610918	789624	2	869,502,	0,3292,
#Partially deleted in new
chr17	48607626	48633572	chr17:48607626-48633572	0	-	48607626	48607626	8553170	2	469,59,	0,25887,
#Deleted in new
chr17	48611376	48613479	chr17:48611376-48613479	0	-	48611492	48613479	789624	2	228,274,	0,1829,
#Deleted in new
chr17	48612345	48614939	chr17:48612345-48614939	3	-	48613201	48614704	789624	2	1164,659,	0,1935,
#Deleted in new
chr17	48613187	48614704	chr17:48613187-48614704	1	-	48613201	48614704	789624	2	319,424,	0,1093,
#Deleted in new
chr17	48621158	48626356	chr17:48621158-48626356	3	-	48622899	48626269	789624	2	1977,604,	0,4594,
#Partially deleted in new
chr17	48628674	48634932	chr17:48628674-48634932	3	+	48628674	48628674	8553170	2	184,382,	0,5876,
#Partially deleted in new
chr17	48629548	48634661	chr17:48629548-48634661	0	+	48629548	48629548	8553170	2	103,111,	0,5002,
#Deleted in new
chr17	48632489	48632559	chr17:48632489-48632559	3	-	48632489	48632489	5263520	1	70,	0,
#Deleted in new
chr17	48635922	48647023	chr17:48635922-48647023	3	-	48635922	48635922	8553170	2	851,419,	0,10682,
#Deleted in new
chr17	48636537	48639285	chr17:48636537-48639285	0	-	48636537	48636537	8553170	2	236,200,	0,2548,
#Deleted in new
chr17	48636545	48639110	chr17:48636545-48639110	1	-	48636545	48636545	8553170	3	228,126,25,	0,322,2540,
#Partially deleted in new
chr17	48646922	48704212	chr17:48646922-48704212	3	+	48646922	48646922	8553170	6	32,45,104,179,214,212,	0,5466,5948,36316,40574,57078,
#Partially deleted in new
chr17	48646928	48704422	chr17:48646928-48704422	0	+	48646928	48646928	8553170	5	26,45,104,179,422,	0,5460,5942,36310,57072,
#Partially deleted in new
chr17	48680888	48704837	chr17:48680888-48704837	0	+	48680888	48680888	8553170	2	124,837,	0,23112,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	48680946	48704245	chr17:48680946-48704245	1	+	48680946	48680946	8553170	5	66,104,179,85,245,	0,1606,2292,19665,23054,
#Partially deleted in new
chr17	48683366	48706330	chr17:48683366-48706330	1	+	48683366	48683366	8553170	4	51,85,1683,272,	0,17245,20634,22692,
#Deleted in new
chr17	48690480	48690624	chr17:48690480-48690624	7	-	48690480	48690480	16724991	1	144,	0,
#Partially deleted in new
chr17	48691115	48691694	chr17:48691115-48691694	7	-	48691115	48691115	16724991	1	579,	0,
#Deleted in new
chr17	48705202	48707346	chr17:48705202-48707346	0	+	48705202	48705202	8553170	2	148,1288,	0,856,
#Partially deleted in new
chr17	48713729	48713959	chr17:48713729-48713959	7	+	48713729	48713729	16724991	1	230,	0,
#Deleted in new
chr17	48721718	48722522	chr17:48721718-48722522	3	-	48721800	48722392	789624	2	181,205,	0,599,
#Deleted in new
chr17	48723167	48724758	chr17:48723167-48724758	1	+	48724410	48724683	789624	2	146,431,	0,1160,
#Deleted in new
chr17	48723187	48723314	chr17:48723187-48723314	3	+	48723187	48723187	8553170	1	127,	0,
#Deleted in new
chr17	48723691	48724751	chr17:48723691-48724751	3	+	48723704	48724683	789624	2	80,424,	0,636,
#Deleted in new
chr17	48723691	48723772	chr17:48723691-48723772	3	+	48723691	48723691	8553170	1	81,	0,
#Deleted in new
chr17	48724407	48724475	chr17:48724407-48724475	3	-	48724407	48724407	5263520	1	68,	0,
#Deleted in new
chr17	48724762	48729178	chr17:48724762-48729178	3	-	48726789	48728593	0	2	2281,1186,	0,3230,
#Deleted in new
chr17	48733090	48733888	chr17:48733090-48733888	3	+	48733090	48733090	8553170	2	32,500,	0,298,
#Partially deleted in new
chr17	48762234	48794334	chr17:48762234-48794334	1	-	48768988	48794280	789624	9	739,266,370,279,172,189,176,226,131,	0,6754,7493,22688,23929,25576,27696,29143,31969,
#Partially deleted in new
chr17	48762240	48817214	chr17:48762240-48817214	3	-	48768988	48817072	789624	16	733,266,370,279,172,189,176,226,86,144,157,131,119,38,220,245,	0,6748,7487,22682,23923,25570,27690,29137,33820,34820,37363,39014,39284,41650,42531,54729,
#Partially deleted in new
chr17	48762240	48794334	chr17:48762240-48794334	0	-	48787806	48794235	789624	7	733,279,172,211,176,226,131,	0,22682,23923,25548,27690,29137,31963,
#Partially deleted in new
chr17	48762240	48817053	chr17:48762240-48817053	0	-	48762240	48762240	8553170	16	733,266,370,279,172,189,176,226,86,144,157,207,131,119,1101,84,	0,6748,7487,22682,23923,25570,27690,29137,33820,34820,37363,37831,39014,39284,41650,54729,
#Partially deleted in new
chr17	48762242	48817077	chr17:48762242-48817077	0	-	48804294	48817077	789624	14	731,279,172,189,176,226,86,144,157,131,119,633,220,108,	0,22680,23921,25568,27688,29135,33818,34818,37361,39012,39282,41648,42529,54727,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	48765553	48765847	chr17:48765553-48765847	3	-	48765553	48765553	8553170	1	294,	0,
#Partially deleted in new
chr17	48786248	48794294	chr17:48786248-48794294	0	-	48790054	48794235	789624	4	87,189,176,91,	0,1562,3682,7955,
#Partially deleted in new
chr17	48797129	48803986	chr17:48797129-48803986	0	-	48797129	48797129	8553170	5	75,157,131,119,96,	0,2474,4125,4395,6761,
#Partially deleted in new
chr17	48801558	48817141	chr17:48801558-48817141	0	-	48815354	48817072	789624	5	85,38,220,65,172,	0,2332,3213,13775,15411,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	48830987	48865245	chr17:48830987-48865245	3	+	48841707	48863005	0	13	91,190,103,134,126,89,70,123,87,96,136,29,2408,	0,10710,17076,17334,18264,20101,20571,21518,21938,25104,29326,31288,31850,
#Partially deleted in new
chr17	48831017	48848562	chr17:48831017-48848562	0	+	48831017	48831017	8553170	3	61,190,499,	0,10680,17046,
#Partially deleted in new
chr17	48831025	48863050	chr17:48831025-48863050	1	+	48841707	48863005	0	14	53,190,63,103,134,126,89,70,123,87,96,136,29,213,	0,10672,15008,17038,17296,18226,20063,20533,21480,21900,25066,29288,31250,31812,
#Partially deleted in new
chr17	48831033	48863453	chr17:48831033-48863453	1	+	48841707	48863005	0	14	45,190,72,103,134,126,89,70,123,87,96,136,29,616,	0,10664,15409,17030,17288,18218,20055,20525,21472,21892,25058,29280,31242,31804,
#Partially deleted in new
chr17	48831034	48863174	chr17:48831034-48863174	1	+	48841707	48863005	0	12	44,190,103,134,89,70,123,87,96,136,29,337,	0,10663,17029,17287,20054,20524,21471,21891,25057,29279,31241,31803,
#Partially deleted in new
chr17	48831034	48863196	chr17:48831034-48863196	1	+	48848099	48863005	0	12	44,103,134,126,89,70,123,87,96,136,29,359,	0,17029,17287,18217,20054,20524,21471,21891,25057,29279,31241,31803,
#Partially deleted in new
chr17	48831034	48851133	chr17:48831034-48851133	0	+	48841707	48851133	789624	6	44,190,19,134,126,45,	0,10663,17029,17287,18217,20054,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	48831034	48842662	chr17:48831034-48842662	0	+	48831034	48831034	8553170	2	44,965,	0,10663,
#Partially deleted in new
chr17	48831034	48856174	chr17:48831034-48856174	0	+	48848099	48856174	789624	10	44,114,103,134,126,89,70,123,87,83,	0,10739,17029,17287,18217,20054,20524,21471,21891,25057,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	48831044	48842534	chr17:48831044-48842534	0	+	48831044	48831044	8553170	3	34,190,334,	0,10653,11156,
#Partially deleted in new
chr17	48831055	48849269	chr17:48831055-48849269	0	+	48841707	48849269	789624	6	23,190,103,134,27,18,	0,10642,17008,17266,17745,18196,
#Partially deleted in new
chr17	48831227	48848336	chr17:48831227-48848336	0	+	48848099	48848336	789624	3	649,103,15,	0,16836,17094,
#Partially deleted in new
chr17	48841562	48851124	chr17:48841562-48851124	0	+	48841707	48851124	789624	5	325,103,134,126,36,	0,6501,6759,7689,9526,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	48847723	48848455	chr17:48847723-48848455	0	+	48847723	48847723	8553170	2	443,134,	0,598,
#Partially deleted in new
chr17	48848208	48853035	chr17:48848208-48853035	0	+	48848208	48848208	8553170	6	247,126,89,70,123,110,	0,1043,2880,3350,4297,4717,
#Deleted in new
chr17	48850981	48851698	chr17:48850981-48851698	0	+	48850981	48850981	8553170	2	196,140,	0,577,
#Partially deleted in new
chr17	48851100	48852858	chr17:48851100-48852858	0	+	48851100	48851100	8553170	3	77,70,353,	0,458,1405,
#Partially deleted in new
chr17	48851206	48852645	chr17:48851206-48852645	0	+	48851206	48851206	8553170	2	422,140,	0,1299,
#Partially deleted in new
chr17	48851602	48853235	chr17:48851602-48853235	0	+	48851602	48851602	8553170	3	26,123,310,	0,903,1323,
#Partially deleted in new
chr17	48852339	48860360	chr17:48852339-48860360	0	+	48852339	48852339	8553170	4	289,87,96,47,	0,586,3752,7974,
#Partially deleted in new
chr17	48852960	48863221	chr17:48852960-48863221	0	+	48852960	48863048	789624	4	52,96,29,384,	0,3131,9315,9877,
#Deleted in new
chr17	48855802	48856267	chr17:48855802-48856267	0	+	48855802	48855802	8553170	1	465,	0,
#Partially deleted in new
chr17	48856100	48863125	chr17:48856100-48863125	0	+	48856100	48860320	789624	5	87,38,136,29,288,	0,478,4213,6175,6737,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	48865084	48866522	chr17:48865084-48866522	0	+	48865084	48865084	8553170	2	201,473,	0,965,
#Partially deleted in new
chr17	48874859	48908983	chr17:48874859-48908983	7	-	48874859	48874859	16724991	4	180,82,431,45,	0,4404,17387,34079,
#Deleted in new
chr17	48874913	48875198	chr17:48874913-48875198	5	-	48874913	48874913	16724991	1	285,	0,
#Partially deleted in new
chr17	48880839	48880967	chr17:48880839-48880967	3	+	48880839	48880839	8553170	1	128,	0,
#Partially deleted in new
chr17	48881121	48881316	chr17:48881121-48881316	7	+	48881121	48881121	16724991	1	195,	0,
#Partially deleted in new
chr17	48892764	48895871	chr17:48892764-48895871	3	+	48893417	48895769	789624	5	76,48,78,179,217,	0,644,1607,2391,2890,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	48892766	48895868	chr17:48892766-48895868	0	+	48892766	48892766	8553170	3	74,1926,214,	0,642,2888,
#Partially deleted in new
chr17	48892796	48895871	chr17:48892796-48895871	1	+	48893417	48895769	789624	5	44,48,78,152,217,	0,612,1575,2386,2858,
#Partially deleted in new
chr17	48892801	48895349	chr17:48892801-48895349	1	+	48893417	48895338	789624	4	39,48,78,194,	0,607,1570,2354,
#Partially deleted in new
chr17	48892816	48895869	chr17:48892816-48895869	1	+	48893417	48895769	789624	5	94,48,78,179,215,	0,592,1555,2339,2838,
#Partially deleted in new
chr17	48892816	48895871	chr17:48892816-48895871	1	+	48893417	48895769	789624	4	24,48,179,217,	0,592,2339,2838,
#Partially deleted in new
chr17	48892853	48895861	chr17:48892853-48895861	0	+	48892853	48892853	8553170	4	272,101,179,207,	0,1495,2302,2801,
#Partially deleted in new
chr17	48893312	48895334	chr17:48893312-48895334	0	+	48893417	48895334	789624	3	144,78,179,	0,1059,1843,
#Partially deleted in new
chr17	48894166	48895871	chr17:48894166-48895871	0	+	48894166	48894166	8553170	3	283,179,217,	0,989,1488,
#Deleted in new
chr17	48894860	48895871	chr17:48894860-48895871	0	+	48894860	48894860	8553170	3	37,179,217,	0,295,794,
#Partially deleted in new
chr17	48899130	48899748	chr17:48899130-48899748	7	+	48899130	48899130	16724991	2	101,200,	0,418,
#Partially deleted in new
chr17	48908368	48929056	chr17:48908368-48929056	3	+	48908503	48927134	0	7	452,73,188,112,113,91,2093,	0,2439,4465,7707,12791,14478,18595,
#Partially deleted in new
chr17	48908472	48921272	chr17:48908472-48921272	0	+	48908503	48921272	789624	3	348,112,113,	0,7603,12687,
#Partially deleted in new
chr17	48908715	48927103	chr17:48908715-48927103	0	+	48908715	48916153	789624	7	105,73,132,112,113,91,140,	0,2092,4118,7360,12444,14131,18248,
#Partially deleted in new
chr17	48910347	48916123	chr17:48910347-48916123	0	+	48910814	48916123	789624	3	533,188,48,	0,2486,5728,
#Partially deleted in new
chr17	48910689	48927054	chr17:48910689-48927054	0	+	48910814	48916153	789624	5	191,112,113,91,91,	0,5386,10470,12157,16274,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	48911178	48929054	chr17:48911178-48929054	0	+	48911178	48911178	8553170	5	1843,112,113,91,2091,	0,4897,9981,11668,15785,
#Partially deleted in new
chr17	48915719	48927155	chr17:48915719-48927155	0	+	48915719	48915719	8553170	4	468,113,91,192,	0,5440,7127,11244,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	48921201	48923097	chr17:48921201-48923097	0	+	48921201	48922988	789624	2	71,251,	0,1645,
#Partially deleted in new
chr17	48929315	48945117	chr17:48929315-48945117	3	-	48930474	48944734	0	8	1297,75,142,73,105,139,51,437,	0,2327,3889,6854,7704,11608,14609,15365,
#Partially deleted in new
chr17	48930370	48944733	chr17:48930370-48944733	0	-	48931715	48944733	789624	5	242,75,139,51,53,	0,1272,10553,13554,14310,
#Partially deleted in new
chr17	48930373	48944810	chr17:48930373-48944810	1	-	48930474	48944734	0	8	239,72,142,73,105,139,51,130,	0,1269,2831,5796,6646,10550,13551,14307,
#Partially deleted in new
chr17	48930380	48937118	chr17:48930380-48937118	0	-	48930380	48930380	8553170	5	232,75,142,112,10,	0,1262,2824,5750,6728,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	48930387	48933591	chr17:48930387-48933591	0	-	48930387	48930387	8553170	3	225,75,387,	0,1255,2817,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	48930389	48933318	chr17:48930389-48933318	0	-	48930389	48930389	8553170	2	223,1676,	0,1253,
#Partially deleted in new
chr17	48930425	48937054	chr17:48930425-48937054	0	-	48937005	48937054	789624	5	187,75,142,73,200,	0,1217,2779,5744,6429,
#Partially deleted in new
chr17	48930428	48944811	chr17:48930428-48944811	0	-	48933340	48944734	789624	5	184,75,142,51,131,	0,1214,2776,13496,14252,
#Partially deleted in new
chr17	48930503	48944825	chr17:48930503-48944825	0	-	48937067	48944734	789624	7	109,75,142,73,105,51,145,	0,1139,2701,5666,6516,13421,14177,
#Partially deleted in new
chr17	48931642	48944747	chr17:48931642-48944747	0	-	48937067	48944734	789624	9	75,142,73,79,105,11,139,51,67,	0,1562,4527,5212,5377,5638,9281,12282,13038,
#Partially deleted in new
chr17	48931642	48944831	chr17:48931642-48944831	0	-	48936165	48944734	789624	7	75,142,112,105,139,51,151,	0,1562,4488,5377,9281,12282,13038,
#Partially deleted in new
chr17	48931790	48937100	chr17:48931790-48937100	3	+	48931790	48931790	8553170	3	109,252,122,	0,1225,5188,
#Partially deleted in new
chr17	48935702	48944708	chr17:48935702-48944708	0	-	48935702	48935702	8553170	5	540,105,139,51,28,	0,1317,5221,8222,8978,
#Deleted in new
chr17	48936033	48937239	chr17:48936033-48937239	0	-	48936033	48936033	8553170	2	209,220,	0,986,
#Deleted in new
chr17	48936040	48937107	chr17:48936040-48937107	0	-	48936040	48936040	8553170	2	202,253,	0,814,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	48936655	48944139	chr17:48936655-48944139	0	-	48936655	48936655	8553170	3	469,139,215,	0,4268,7269,
#Partially deleted in new
chr17	48936995	48944806	chr17:48936995-48944806	0	-	48936995	48936995	8553170	4	129,139,51,126,	0,3928,6929,7685,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	48949360	48949520	chr17:48949360-48949520	3	-	48949360	48949360	8553170	1	160,	0,
#Partially deleted in new
chr17	48958553	48968596	chr17:48958553-48968596	3	-	48958706	48967232	0	6	163,102,93,171,107,80,	0,2332,3173,5756,8593,9963,
#Deleted in new
chr17	48995265	48997492	chr17:48995265-48997492	3	-	48995265	48995265	8553170	3	317,74,37,	0,1152,2190,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	48997411	49055650	chr17:48997411-49055650	3	+	48997745	49049444	0	15	509,61,49,52,64,282,135,123,136,123,120,75,132,114,6299,	0,1697,28206,29054,34498,40756,42545,43966,44830,46016,46555,47579,48478,48848,51940,
#Deleted in new
chr17	48997485	49004858	chr17:48997485-49004858	0	+	48997485	48997485	8553170	3	435,61,258,	0,1623,7115,
#Partially deleted in new
chr17	48997745	49049444	chr17:48997745-49049444	1	+	48997745	49049444	0	13	175,61,49,52,64,123,136,123,120,75,132,114,93,	0,1363,27872,28720,34164,43632,44496,45682,46221,47245,48144,48514,51606,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	48997762	49036933	chr17:48997762-49036933	0	+	48997762	48997762	8553170	6	158,61,49,52,64,384,	0,1346,27855,28703,34147,38787,
#Partially deleted in new
chr17	49004730	49013725	chr17:49004730-49013725	3	-	49004730	49004730	8553170	4	76,84,91,181,	0,7712,8205,8814,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	49013916	49036833	chr17:49013916-49036833	0	+	49013916	49013916	8553170	5	119,49,52,64,284,	0,11701,12549,17993,22633,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	49017792	49018061	chr17:49017792-49018061	3	-	49017792	49017792	8553170	1	269,	0,
#Partially deleted in new
chr17	49026391	49038438	chr17:49026391-49038438	0	+	49026391	49026391	8553170	3	126,64,271,	0,5518,11776,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	49036351	49036455	chr17:49036351-49036455	3	+	49036351	49036351	8553170	1	104,	0,
#Deleted in new
chr17	49037121	49037429	chr17:49037121-49037429	7	+	49037121	49037121	16724991	1	308,	0,
#Partially deleted in new
chr17	49085510	49086702	chr17:49085510-49086702	7	+	49085510	49085510	16724991	2	151,156,	0,1036,
#Partially deleted in new
chr17	49132459	49169989	chr17:49132459-49169989	1	+	49141310	49169728	789624	11	51,201,138,107,38,181,87,188,141,220,467,	0,8787,9575,20340,24106,26577,28095,31628,33654,36221,37063,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	49132768	49176840	chr17:49132768-49176840	1	+	49132792	49169728	789624	11	38,201,138,107,38,181,87,188,141,220,7318,	0,8478,9266,20031,23797,26268,27786,31319,33345,35912,36754,
#Partially deleted in new
chr17	49132966	49169874	chr17:49132966-49169874	3	+	49133025	49169728	789624	11	253,201,138,107,38,181,87,188,141,220,352,	0,8280,9068,19833,23599,26070,27588,31121,33147,35714,36556,
#Partially deleted in new
chr17	49148338	49149111	chr17:49148338-49149111	7	-	49148338	49148338	16724991	2	434,34,	0,739,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	49202790	49208912	chr17:49202790-49208912	1	-	49202955	49207422	789624	4	242,106,106,68,	0,3986,4548,6054,
#Partially deleted in new
chr17	49206228	49209400	chr17:49206228-49209400	1	-	49206756	49207422	789624	4	654,106,110,48,	0,1110,2616,3124,
#Partially deleted in new
chr17	49206388	49209385	chr17:49206388-49209385	1	-	49206756	49207422	789624	4	494,106,110,179,	0,950,2456,2818,
#Partially deleted in new
chr17	49206578	49209217	chr17:49206578-49209217	1	-	49206756	49207422	789624	3	304,106,373,	0,760,2266,
#Partially deleted in new
chr17	49206644	49210574	chr17:49206644-49210574	3	-	49206756	49207422	789624	4	238,106,110,131,	0,694,2200,3799,
#Partially deleted in new
chr17	49206756	49209400	chr17:49206756-49209400	1	-	49206756	49207422	789624	4	126,106,110,158,	0,582,2088,2486,
#Partially deleted in new
chr17	49210226	49223225	chr17:49210226-49223225	3	+	49210724	49222715	789624	8	615,168,177,86,96,158,135,674,	0,6304,7512,9313,9631,9942,11864,12325,
#Partially deleted in new
chr17	49210410	49223036	chr17:49210410-49223036	1	+	49210724	49222715	789624	8	431,150,177,86,96,158,135,485,	0,6120,7328,9129,9447,9758,11680,12141,
#Partially deleted in new
chr17	49219562	49222562	chr17:49219562-49222562	0	+	49219562	49222233	789624	4	63,96,158,493,	0,295,606,2507,
#Partially deleted in new
chr17	49219857	49223007	chr17:49219857-49223007	0	+	49219857	49222715	789624	4	96,158,156,456,	0,311,2212,2694,
#Partially deleted in new
chr17	49223361	49230528	chr17:49223361-49230528	3	-	49224245	49226691	789624	3	1643,112,61,	0,3285,7106,
#Partially deleted in new
chr17	49223369	49230766	chr17:49223369-49230766	1	-	49224245	49225124	789624	3	1762,112,299,	0,3277,7098,
#Deleted in new
chr17	49223659	49226761	chr17:49223659-49226761	1	-	49224245	49225124	789624	2	1472,115,	0,2987,
#Partially deleted in new
chr17	49224438	49230766	chr17:49224438-49230766	0	-	49224438	49226691	789624	3	566,112,190,	0,2208,6138,
#Partially deleted in new
chr17	49224790	49230747	chr17:49224790-49230747	0	-	49224790	49225124	789624	3	341,112,280,	0,1856,5677,
#Partially deleted in new
chr17	49224790	49229142	chr17:49224790-49229142	0	-	49224790	49226691	789624	3	214,108,69,	0,1856,4283,
#Partially deleted in new
chr17	49224799	49230738	chr17:49224799-49230738	0	-	49224799	49226691	789624	4	332,122,112,271,	0,856,1847,5668,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	49248238	49256449	chr17:49248238-49256449	3	+	49248238	49248238	8553170	4	64,429,65,1759,	0,4007,4615,6452,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	49248242	49258662	chr17:49248242-49258662	0	+	49248242	49248242	789624	3	60,429,230,	0,4003,10190,
#Partially deleted in new
chr17	49248255	49252694	chr17:49248255-49252694	0	+	49248255	49248255	8553170	2	47,449,	0,3990,
#Deleted in new
chr17	49288345	49288454	chr17:49288345-49288454	3	-	49288345	49288345	5263520	1	109,	0,
#Deleted in new
chr17	49289205	49289860	chr17:49289205-49289860	0	-	49289205	49289205	8553170	2	454,132,	0,523,
#Partially deleted in new
chr17	49289207	49361993	chr17:49289207-49361993	0	-	49298412	49317725	789624	8	2488,819,145,116,148,618,124,85,	0,8898,22104,22719,23490,28158,33177,72701,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	49294564	49362473	chr17:49294564-49362473	3	-	49298412	49317725	789624	6	4360,145,116,148,1158,61,	0,16747,17362,18133,22261,67848,
#Partially deleted in new
chr17	49295998	49362116	chr17:49295998-49362116	1	-	49298412	49317725	789624	6	2926,145,116,148,1158,208,	0,15313,15928,16699,20827,65910,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	49361164	49366115	chr17:49361164-49366115	3	+	49361164	49361164	789624	3	57,71,417,	0,3114,4534,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	49361188	49369998	chr17:49361188-49369998	0	+	49361188	49361188	8553170	3	33,71,200,	0,3090,8610,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	49362381	49366092	chr17:49362381-49366092	1	+	49362381	49362381	789624	3	136,71,394,	0,1897,3317,
#Partially deleted in new
chr17	49375379	49380094	chr17:49375379-49380094	3	+	49375379	49375379	8553170	2	130,115,	0,4600,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	49400428	49400800	chr17:49400428-49400800	7	-	49400428	49400428	16724991	1	372,	0,
#Partially deleted in new
chr17	49404048	49414905	chr17:49404048-49414905	1	-	49404991	49413264	0	6	994,24,143,162,115,71,	0,5086,5282,7629,9128,10786,
#Partially deleted in new
chr17	49404048	49414905	chr17:49404048-49414905	3	-	49404991	49413264	0	8	1156,96,117,143,162,115,92,71,	0,2710,4993,5282,7629,9128,10193,10786,
#Partially deleted in new
chr17	49404048	49414858	chr17:49404048-49414858	1	-	49404991	49413264	0	7	1156,96,117,143,162,115,119,	0,2710,4993,5282,7629,9128,10691,
#Partially deleted in new
chr17	49404051	49414880	chr17:49404051-49414880	1	-	49404991	49413264	0	7	1153,96,117,143,162,115,46,	0,2707,4990,5279,7626,9125,10783,
#Deleted in new
chr17	49404080	49405197	chr17:49404080-49405197	3	+	49404080	49404080	8553170	2	542,421,	0,696,
#Partially deleted in new
chr17	49405067	49407473	chr17:49405067-49407473	0	-	49405067	49405067	8553170	2	137,715,	0,1691,
#Partially deleted in new
chr17	49405072	49414884	chr17:49405072-49414884	0	-	49405072	49413264	789624	8	132,96,117,143,162,115,92,50,	0,1686,3969,4258,6605,8104,9169,9762,
#Partially deleted in new
chr17	49405160	49414858	chr17:49405160-49414858	0	-	49405160	49413264	789624	7	44,96,117,143,162,115,119,	0,1598,3881,4170,6517,8016,9579,
#Partially deleted in new
chr17	49405186	49413253	chr17:49405186-49413253	0	-	49405186	49405186	8553170	5	18,96,117,143,77,	0,1572,3855,4144,7990,
#Partially deleted in new
chr17	49406758	49414802	chr17:49406758-49414802	0	-	49406758	49413264	789624	6	96,117,143,162,115,61,	0,2283,2572,4919,6418,7983,
#Partially deleted in new
chr17	49406760	49414848	chr17:49406760-49414848	0	-	49406760	49413264	789624	6	94,117,143,162,115,101,	0,2281,2570,4917,6416,7987,
#Partially deleted in new
chr17	49408755	49414858	chr17:49408755-49414858	0	-	49408755	49408755	8553170	5	403,143,162,115,24,	0,575,2922,4421,6079,
#Partially deleted in new
chr17	49409075	49414877	chr17:49409075-49414877	0	-	49409075	49409075	8553170	4	83,143,162,43,	0,255,2602,5759,
#Partially deleted in new
chr17	49409349	49414876	chr17:49409349-49414876	0	-	49409349	49413264	789624	4	124,162,115,133,	0,2328,3827,5394,
#Partially deleted in new
chr17	49409448	49412234	chr17:49409448-49412234	0	-	49409448	49409448	8553170	2	25,557,	0,2229,
#Partially deleted in new
chr17	49412685	49414878	chr17:49412685-49414878	0	-	49412685	49412685	8553170	2	606,44,	0,2149,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	49416743	49416850	chr17:49416743-49416850	3	-	49416743	49416743	8553170	1	107,	0,
#Deleted in new
chr17	49424268	49424922	chr17:49424268-49424922	7	-	49424268	49424268	16724991	1	654,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	49457860	49461749	chr17:49457860-49461749	3	-	49457860	49457860	789624	3	278,148,1328,	0,728,2561,
#Deleted in new
chr17	49494222	49497800	chr17:49494222-49497800	3	-	49494222	49494222	8553170	1	3578,	0,
#Partially deleted in new
chr17	49495292	49515017	chr17:49495292-49515017	3	+	49495417	49513009	0	6	191,142,360,253,161,2310,	0,6770,11006,15119,16599,17415,
#Partially deleted in new
chr17	49496623	49506385	chr17:49496623-49506385	0	+	49506372	49506385	8553170	3	474,142,87,	0,5439,9675,
#Partially deleted in new
chr17	49497390	49513372	chr17:49497390-49513372	1	+	49506372	49513009	0	6	259,142,360,253,161,665,	0,4672,8908,13021,14501,15317,
#Partially deleted in new
chr17	49505656	49574064	chr17:49505656-49574064	3	-	49505656	49505656	789624	3	844,131,246,	0,5326,68162,
#Deleted in new
chr17	49510816	49510900	chr17:49510816-49510900	3	+	49510816	49510816	5263520	1	84,	0,
#Partially deleted in new
chr17	49544787	49567889	chr17:49544787-49567889	3	-	49544787	49544787	8553170	3	442,163,94,	0,852,23008,
#Partially deleted in new
chr17	49544846	49577962	chr17:49544846-49577962	0	-	49544846	49544846	8553170	2	383,194,	0,32922,
#Deleted in new
chr17	49575857	49580358	chr17:49575857-49580358	3	+	49576219	49579300	789624	2	416,1763,	0,2738,
#Partially deleted in new
chr17	49576121	49582290	chr17:49576121-49582290	1	+	49576219	49581923	789624	3	152,651,727,	0,2474,5442,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	49578633	49583827	chr17:49578633-49583827	0	+	49578633	49578633	8553170	1	5194,	0,
#Partially deleted in new
chr17	49598885	49678163	chr17:49598885-49678163	3	-	49600377	49622810	0	11	1637,143,123,56,178,128,152,122,144,51,231,	0,2979,8364,8988,12394,20095,20348,23060,23847,37873,79047,
#Deleted in new
chr17	49599496	49601631	chr17:49599496-49601631	0	-	49599496	49599496	8553170	1	2135,	0,
#Partially deleted in new
chr17	49600005	49678234	chr17:49600005-49678234	1	-	49600377	49622810	0	10	517,143,123,56,178,128,152,122,144,302,	0,1859,7244,7868,11274,18975,19228,21940,22727,77927,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	49600202	49646630	chr17:49600202-49646630	1	-	49600377	49622810	0	11	320,143,123,56,178,128,152,122,144,51,515,	0,1662,7047,7671,11077,18778,19031,21743,22530,36556,45913,
#Deleted in new
chr17	49600278	49602041	chr17:49600278-49602041	0	-	49600278	49600278	8553170	2	244,177,	0,1586,
#Deleted in new
chr17	49600308	49602398	chr17:49600308-49602398	0	-	49600308	49600308	8553170	2	214,718,	0,1372,
#Partially deleted in new
chr17	49607067	49611318	chr17:49607067-49611318	0	-	49607067	49607067	8553170	3	305,56,39,	0,806,4212,
#Partially deleted in new
chr17	49607249	49619304	chr17:49607249-49619304	0	-	49618545	49619304	789624	7	123,56,178,163,60,128,71,	0,624,4030,5529,11254,11731,11984,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	49607299	49678110	chr17:49607299-49678110	0	-	49607299	49622810	789624	10	73,56,178,128,152,122,144,51,52,178,	0,574,3980,11681,11934,14646,15433,29459,60727,70633,
#Partially deleted in new
chr17	49607873	49678085	chr17:49607873-49678085	0	-	49607873	49622810	789624	8	56,178,128,152,122,144,51,153,	0,3406,11107,11360,14072,14859,28885,70059,
#Partially deleted in new
chr17	49611337	49678106	chr17:49611337-49678106	0	-	49622226	49622810	789624	7	120,128,152,122,78,144,174,	0,7643,7896,10608,10868,11395,66595,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	49619233	49678025	chr17:49619233-49678025	0	-	49619233	49622810	789624	5	152,122,144,52,93,	0,2712,3499,48793,58699,
#Partially deleted in new
chr17	49619307	49678113	chr17:49619307-49678113	0	-	49619307	49619307	8553170	5	78,50,122,144,181,	0,1313,2638,3425,58625,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	49619318	49678003	chr17:49619318-49678003	0	-	49622226	49622810	789624	6	67,122,78,144,52,71,	0,2627,2887,3414,48708,58614,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	49621945	49646622	chr17:49621945-49646622	0	-	49621945	49622810	789624	3	122,144,507,	0,787,24170,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	49622024	49678005	chr17:49622024-49678005	0	-	49622024	49622810	789624	5	43,144,117,51,73,	0,708,14172,14734,55908,
#Partially deleted in new
chr17	49622413	49678082	chr17:49622413-49678082	0	-	49622413	49622413	8553170	2	463,150,	0,55519,
#Partially deleted in new
chr17	49700933	49707951	chr17:49700933-49707951	3	-	49701457	49707944	789624	9	577,154,107,127,158,31,131,104,222,	0,1924,2254,3166,4190,4932,5270,6031,6796,
#Partially deleted in new
chr17	49700942	49708199	chr17:49700942-49708199	1	-	49701457	49707833	789624	9	568,154,107,127,158,31,131,104,470,	0,1915,2245,3157,4181,4923,5261,6022,6787,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	49701286	49707771	chr17:49701286-49707771	0	-	49701286	49701286	8553170	8	224,93,154,107,127,1186,104,429,	0,543,1571,1901,2813,3837,5678,6056,
#Partially deleted in new
chr17	49701320	49708166	chr17:49701320-49708166	0	-	49701320	49701320	8553170	9	190,154,107,127,158,444,104,102,91,	0,1537,1867,2779,3803,4545,5644,6022,6755,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	49701327	49703990	chr17:49701327-49703990	0	-	49701327	49701327	8553170	2	1684,803,	0,1860,
#Partially deleted in new
chr17	49701327	49703138	chr17:49701327-49703138	0	-	49701327	49701327	8553170	2	183,281,	0,1530,
#Partially deleted in new
chr17	49701338	49708090	chr17:49701338-49708090	0	-	49705263	49707833	789624	9	172,154,107,127,158,31,106,104,361,	0,1519,1849,2761,3785,4527,4865,5626,6391,
#Deleted in new
chr17	49702891	49708163	chr17:49702891-49708163	0	-	49702891	49706996	789624	9	120,107,127,158,31,106,104,102,88,	0,296,1208,2232,2974,3312,4073,4451,5184,
#Deleted in new
chr17	49703196	49708169	chr17:49703196-49708169	0	-	49703196	49708086	789624	8	98,127,158,31,131,104,102,94,	0,903,1927,2669,3007,3768,4146,4879,
#Deleted in new
chr17	49703232	49707067	chr17:49703232-49707067	0	-	49705885	49707067	789624	5	62,127,158,31,103,	0,867,1891,2633,3732,
#Deleted in new
chr17	49703837	49705365	chr17:49703837-49705365	0	-	49703837	49703837	8553170	2	389,242,	0,1286,
#Deleted in new
chr17	49703931	49707920	chr17:49703931-49707920	0	-	49703931	49703931	8553170	6	295,158,31,131,104,191,	0,1192,1934,2272,3033,3798,
#Deleted in new
chr17	49704099	49708157	chr17:49704099-49708157	0	-	49704099	49708086	789624	6	127,158,31,131,104,82,	0,1024,1766,2104,2865,3976,
#Deleted in new
chr17	49704110	49707949	chr17:49704110-49707949	0	-	49704110	49707833	789624	7	116,158,31,131,104,102,220,	0,1013,1755,2093,2854,3232,3619,
#Deleted in new
chr17	49704151	49707940	chr17:49704151-49707940	0	-	49704151	49707833	789624	5	75,158,31,106,211,	0,972,1714,2052,3578,
#Deleted in new
chr17	49705071	49706355	chr17:49705071-49706355	0	-	49705071	49705071	8553170	3	210,31,152,	0,794,1132,
#Deleted in new
chr17	49705221	49709014	chr17:49705221-49709014	0	-	49705221	49706996	789624	5	60,31,106,104,247,	0,644,982,1743,3546,
#Deleted in new
chr17	49705867	49707964	chr17:49705867-49707964	0	-	49705867	49705867	8553170	3	467,104,235,	0,1097,1862,
#Deleted in new
chr17	49705884	49707260	chr17:49705884-49707260	0	-	49705884	49705884	8553170	3	12,106,296,	0,319,1080,
#Deleted in new
chr17	49706075	49707920	chr17:49706075-49707920	0	-	49706075	49706075	8553170	3	234,104,191,	0,889,1654,
#Partially deleted in new
chr17	49708333	49720060	chr17:49708333-49720060	3	+	49708333	49708333	8553170	2	142,433,	0,11294,
#Partially deleted in new
chr17	49710331	49764167	chr17:49710331-49764167	3	-	49711254	49764087	789624	8	1224,151,202,135,111,96,170,276,	0,5833,7181,9428,9994,12167,22219,53560,
#Partially deleted in new
chr17	49710994	49788592	chr17:49710994-49788592	1	-	49711254	49717606	789624	8	561,151,202,135,111,96,170,96,	0,5170,6518,8765,9331,11504,21556,77502,
#Partially deleted in new
chr17	49711344	49719894	chr17:49711344-49719894	0	-	49718011	49719894	789624	5	211,151,202,77,135,	0,4820,6168,6623,8415,
#Partially deleted in new
chr17	49716204	49724527	chr17:49716204-49724527	0	-	49716204	49724429	789624	6	111,202,135,111,96,134,	0,1308,3555,4121,6294,8189,
#Partially deleted in new
chr17	49717556	49788578	chr17:49717556-49788578	0	-	49717556	49717556	8553170	5	158,135,111,96,82,	0,2203,2769,4942,70940,
#Partially deleted in new
chr17	49717586	49788989	chr17:49717586-49788989	0	-	49717586	49717586	8553170	6	128,135,111,96,170,488,	0,2173,2739,4912,14964,70915,
#Partially deleted in new
chr17	49717605	49789180	chr17:49717605-49789180	0	-	49717605	49717605	8553170	6	109,135,111,96,170,118,	0,2154,2720,4893,14945,71457,
#Partially deleted in new
chr17	49717656	49764131	chr17:49717656-49764131	0	-	49717656	49764087	789624	5	58,135,111,170,240,	0,2103,2669,14894,46235,
#Partially deleted in new
chr17	49717685	49747263	chr17:49717685-49747263	0	-	49717685	49717685	8553170	6	29,135,111,96,170,83,	0,2074,2640,4813,14865,29495,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	49720331	49789165	chr17:49720331-49789165	0	-	49720331	49720331	8553170	5	105,96,98,170,103,	0,2167,11948,12219,68731,
#Partially deleted in new
chr17	49722506	49732942	chr17:49722506-49732942	0	-	49722506	49722506	8553170	2	88,392,	0,10044,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	49788554	49835030	chr17:49788554-49835030	3	+	49788834	49827502	0	15	295,148,177,240,83,90,99,111,192,90,141,94,147,107,7630,	0,3331,8195,9764,16808,20564,22921,27248,29265,32782,33095,34647,37445,38138,38846,
#Partially deleted in new
chr17	49788680	49827703	chr17:49788680-49827703	1	+	49788834	49827502	0	13	169,148,83,90,99,111,192,90,141,94,147,107,303,	0,3205,16682,20438,22795,27122,29139,32656,32969,34521,37319,38012,38720,
#Partially deleted in new
chr17	49788681	49827617	chr17:49788681-49827617	1	+	49788834	49827502	0	13	168,148,177,83,99,111,192,90,141,94,147,107,217,	0,3204,8068,16681,22794,27121,29138,32655,32968,34520,37318,38011,38719,
#Partially deleted in new
chr17	49788692	49827800	chr17:49788692-49827800	1	+	49788834	49827502	0	12	157,148,83,99,111,192,90,141,94,147,107,400,	0,3193,16670,22783,27110,29127,32644,32957,34509,37307,38000,38708,
#Partially deleted in new
chr17	49788705	49829096	chr17:49788705-49829096	1	+	49788834	49827502	0	14	144,148,177,240,83,99,111,192,90,141,94,147,107,1696,	0,3180,8044,9613,16657,22770,27097,29114,32631,32944,34496,37294,37987,38695,
#Partially deleted in new
chr17	49788713	49815896	chr17:49788713-49815896	0	+	49788713	49788713	8553170	5	136,148,177,9,94,	0,3172,8036,22852,27089,
#Partially deleted in new
chr17	49789311	49798494	chr17:49789311-49798494	0	+	49798446	49798494	789624	4	62,148,177,176,	0,2574,7438,9007,
#Partially deleted in new
chr17	49789652	49829096	chr17:49789652-49829096	1	+	49798446	49827502	789624	14	313,148,177,240,83,99,111,192,90,141,94,147,107,1696,	0,2233,7097,8666,15710,21823,26150,28167,31684,31997,33549,36347,37040,37748,
#Deleted in new
chr17	49795342	49795669	chr17:49795342-49795669	7	+	49795342	49795342	16724991	1	327,	0,
#Partially deleted in new
chr17	49814951	49826706	chr17:49814951-49826706	0	+	49814951	49814951	8553170	8	123,111,192,90,141,94,147,14,	0,851,2868,6385,6698,8250,11048,11741,
#Partially deleted in new
chr17	49815030	49826713	chr17:49815030-49826713	0	+	49815030	49815030	8553170	7	44,111,90,141,94,147,21,	0,772,6306,6619,8171,10969,11662,
#Partially deleted in new
chr17	49815331	49827816	chr17:49815331-49827816	0	+	49815331	49815331	8553170	8	281,111,90,141,94,147,107,416,	0,471,6005,6318,7870,10668,11361,12069,
#Partially deleted in new
chr17	49815389	49827584	chr17:49815389-49827584	0	+	49815389	49815389	8553170	9	223,111,192,90,141,94,147,107,184,	0,413,2430,5947,6260,7812,10610,11303,12011,
#Partially deleted in new
chr17	49815397	49821748	chr17:49815397-49821748	0	+	49815397	49815397	8553170	5	67,111,192,90,99,	0,405,2422,5939,6252,
#Partially deleted in new
chr17	49821492	49826706	chr17:49821492-49826706	0	+	49821492	49821492	8553170	4	298,94,147,14,	0,1709,4507,5200,
#Partially deleted in new
chr17	49821684	49823643	chr17:49821684-49823643	0	+	49821684	49821684	8553170	2	106,442,	0,1517,
#Partially deleted in new
chr17	49823233	49826377	chr17:49823233-49826377	0	+	49823233	49823233	8553170	2	62,378,	0,2766,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	49824481	49827762	chr17:49824481-49827762	0	+	49824481	49824481	8553170	4	259,147,107,362,	0,1518,2211,2919,
#Deleted in new
chr17	49826001	49827130	chr17:49826001-49827130	0	+	49826001	49826001	8553170	2	145,438,	0,691,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	49834238	49836454	chr17:49834238-49836454	3	+	49834238	49834238	8553170	2	315,101,	0,2115,
#Partially deleted in new
chr17	49838308	49848017	chr17:49838308-49848017	1	-	49838641	49848017	0	4	365,33,94,105,	0,3243,5755,9604,
#Partially deleted in new
chr17	49838308	49848017	chr17:49838308-49848017	3	-	49838641	49848017	0	5	365,60,33,94,123,	0,1541,3243,5755,9586,
#Partially deleted in new
chr17	49838308	49848017	chr17:49838308-49848017	1	-	49838641	49848017	0	3	365,94,105,	0,5755,9604,
#Partially deleted in new
chr17	49838308	49848017	chr17:49838308-49848017	1	-	49838641	49848017	0	4	365,60,94,105,	0,1541,5755,9604,
#Partially deleted in new
chr17	49838308	49848017	chr17:49838308-49848017	1	-	49838641	49848017	0	5	365,60,33,94,105,	0,1541,3243,5755,9604,
#Partially deleted in new
chr17	49844055	49848017	chr17:49844055-49848017	0	-	49844055	49844055	8553170	2	102,123,	0,3839,
#Partially deleted in new
chr17	49844056	49848017	chr17:49844056-49848017	0	-	49844056	49844056	8553170	2	101,105,	0,3856,
#Partially deleted in new
chr17	49844059	49848017	chr17:49844059-49848017	0	-	49847855	49848017	789624	2	14,441,	0,3517,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	49845909	49848837	chr17:49845909-49848837	3	+	49845909	49845909	8553170	3	97,97,1906,	0,235,1022,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	49887597	49900893	chr17:49887597-49900893	3	+	49887597	49887597	8553170	5	75,207,87,1088,359,	0,513,8428,10483,12937,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	49914402	49932918	chr17:49914402-49932918	3	+	49914402	49914402	8553170	3	104,110,181,	0,720,18335,
#Deleted in new
chr17	49939121	49939819	chr17:49939121-49939819	7	+	49939121	49939121	16724991	1	698,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	49966074	49966176	chr17:49966074-49966176	3	-	49966074	49966074	8553170	1	102,	0,
#Deleted in new
chr17	49968969	49973191	chr17:49968969-49973191	0	+	49968969	49968969	8553170	4	70,137,236,119,	0,645,3710,4103,
#Deleted in new
chr17	49969173	49974959	chr17:49969173-49974959	3	+	49969468	49973943	789624	3	578,197,1259,	0,3899,4527,
#Deleted in new
chr17	49969329	49972397	chr17:49969329-49972397	0	+	49969329	49969329	8553170	2	422,221,	0,2847,
#Deleted in new
chr17	49971963	49973753	chr17:49971963-49973753	0	+	49971963	49971963	8553170	3	952,197,53,	0,1109,1737,
#Deleted in new
chr17	49972765	49974600	chr17:49972765-49974600	1	+	49973005	49973943	789624	2	504,900,	0,935,
#Deleted in new
chr17	49972938	49974600	chr17:49972938-49974600	1	+	49973005	49973350	789624	1	1662,	0,
#Partially deleted in new
chr17	49990004	49995224	chr17:49990004-49995224	3	-	49991516	49994998	0	3	1860,191,551,	0,3395,4669,
#Partially deleted in new
chr17	49991334	49993703	chr17:49991334-49993703	1	-	49991516	49993555	789624	2	530,304,	0,2065,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	49996888	50016844	chr17:49996888-50016844	3	+	49996888	49996888	8553170	2	139,447,	0,19509,
#Partially deleted in new
chr17	50050348	50055739	chr17:50050348-50055739	3	-	50050348	50050348	789624	3	2287,135,111,	0,3144,5280,
#Partially deleted in new
chr17	50055967	50076995	chr17:50055967-50076995	0	+	50056439	50070858	789624	14	49,208,128,80,87,208,197,89,137,87,277,150,98,22,	0,470,8109,8560,14876,15343,16018,17948,18176,18480,19491,20358,20616,21006,
#Partially deleted in new
chr17	50056067	50090480	chr17:50056067-50090480	0	+	50056067	50056067	8553170	24	578,128,80,250,87,208,197,89,137,87,68,137,150,864,80,78,103,183,123,114,99,126,142,1371,	0,8009,8460,11988,14776,15243,15918,17848,18076,18380,19391,19531,20258,20516,21978,22139,22756,23008,23367,24194,25242,31676,32157,33042,
#Partially deleted in new
chr17	50056109	50090480	chr17:50056109-50090480	3	+	50056439	50088335	789624	26	536,128,80,250,87,208,197,89,137,87,68,137,150,98,148,69,80,78,103,183,123,114,99,126,142,1371,	0,7967,8418,11946,14734,15201,15876,17806,18034,18338,19349,19489,20216,20474,20864,21269,21936,22097,22714,22966,23325,24152,25200,31634,32115,33000,
#Partially deleted in new
chr17	50056439	50089729	chr17:50056439-50089729	1	+	50056439	50089265	789624	25	206,128,80,250,87,208,197,89,137,87,68,137,150,98,148,69,80,78,103,183,123,114,99,126,620,	0,7637,8088,11616,14404,14871,15546,17476,17704,18008,19019,19159,19886,20144,20534,20939,21606,21767,22384,22636,22995,23822,24870,31304,32670,
#Partially deleted in new
chr17	50056486	50064789	chr17:50056486-50064789	0	+	50056486	50056486	8553170	3	159,128,262,	0,7590,8041,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	50063537	50066032	chr17:50063537-50066032	0	+	50063537	50063537	8553170	1	2495,	0,
#Partially deleted in new
chr17	50070872	50074514	chr17:50070872-50074514	0	+	50070872	50074514	789624	4	58,89,137,67,	0,3043,3271,3575,
#Partially deleted in new
chr17	50071739	50074211	chr17:50071739-50074211	0	+	50071739	50071739	8553170	3	443,89,68,	0,2176,2404,
#Partially deleted in new
chr17	50072159	50075700	chr17:50072159-50075700	0	+	50072159	50074284	789624	6	23,89,149,87,68,102,	0,1756,1984,2288,3299,3439,
#Deleted in new
chr17	50075459	50076733	chr17:50075459-50076733	0	+	50075459	50075459	8553170	3	276,150,150,	0,866,1124,
#Partially deleted in new
chr17	50076624	50090481	chr17:50076624-50090481	0	+	50076624	50090318	789624	7	57,148,69,80,78,103,292,	0,349,754,1421,1582,2199,13565,
#Partially deleted in new
chr17	50077399	50079016	chr17:50077399-50079016	0	+	50077399	50077399	8553170	4	48,80,78,193,	0,646,807,1424,
#Partially deleted in new
chr17	50078003	50079483	chr17:50078003-50079483	0	+	50078003	50078003	8553170	5	122,78,103,183,49,	0,203,820,1072,1431,
#Partially deleted in new
chr17	50080316	50081380	chr17:50080316-50081380	0	+	50080316	50081126	789624	3	59,97,71,	0,780,993,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	50086328	50090481	chr17:50086328-50090481	0	+	50086328	50086328	8553170	3	1541,142,1372,	0,1896,2781,
#Deleted in new
chr17	50088212	50089815	chr17:50088212-50089815	0	+	50088212	50088212	8553170	2	154,706,	0,897,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	50094064	50094647	chr17:50094064-50094647	3	+	50094064	50094064	8553170	1	583,	0,
#Partially deleted in new
chr17	50094736	50111058	chr17:50094736-50111058	1	+	50097496	50110097	0	12	162,155,142,72,185,90,78,77,99,108,114,1102,	0,1395,2686,10634,11148,12057,12339,13419,13582,13875,14550,15220,
#Partially deleted in new
chr17	50094783	50106857	chr17:50094783-50106857	0	+	50097496	50106857	789624	5	115,142,72,185,64,	0,2639,10587,11101,12010,
#Partially deleted in new
chr17	50095274	50112152	chr17:50095274-50112152	3	+	50095435	50110097	0	11	279,142,72,185,90,78,77,99,108,114,2196,	0,2148,10096,10610,11519,11801,12881,13044,13337,14012,14682,
#Partially deleted in new
chr17	50095284	50108719	chr17:50095284-50108719	0	+	50097496	50108719	789624	9	96,142,72,185,90,78,77,99,108,	0,2138,10086,10600,11509,11791,12871,13034,13327,
#Deleted in new
chr17	50095374	50097796	chr17:50095374-50097796	0	+	50095374	50095374	8553170	2	179,374,	0,2048,
#Partially deleted in new
chr17	50095386	50106368	chr17:50095386-50106368	0	+	50095386	50095386	8553170	4	167,142,72,484,	0,2036,9984,10498,
#Partially deleted in new
chr17	50095694	50107085	chr17:50095694-50107085	0	+	50097496	50107085	789624	6	116,142,72,185,90,10,	0,1728,9676,10190,11099,11381,
#Partially deleted in new
chr17	50095694	50111368	chr17:50095694-50111368	1	+	50097496	50110097	0	11	116,142,72,185,90,78,77,99,108,114,1412,	0,1728,9676,10190,11099,11381,12461,12624,12917,13592,14262,
#Deleted in new
chr17	50095736	50097449	chr17:50095736-50097449	0	+	50095736	50095736	8553170	2	550,27,	0,1686,
#Partially deleted in new
chr17	50095973	50106039	chr17:50095973-50106039	0	+	50097496	50106039	789624	5	66,155,142,72,155,	0,158,1449,9397,9911,
#Partially deleted in new
chr17	50097512	50108245	chr17:50097512-50108245	0	+	50097512	50097512	8553170	6	52,72,185,90,78,90,	0,7858,8372,9281,9563,10643,
#Deleted in new
chr17	50098459	50098899	chr17:50098459-50098899	3	-	50098459	50098459	8553170	1	440,	0,
#Deleted in new
chr17	50100703	50101920	chr17:50100703-50101920	3	-	50100703	50100703	8553170	2	362,68,	0,1149,
#Deleted in new
chr17	50105278	50107153	chr17:50105278-50107153	0	+	50105278	50105278	8553170	4	164,185,90,78,	0,606,1515,1797,
#Partially deleted in new
chr17	50106440	50108194	chr17:50106440-50108194	0	+	50106440	50106440	8553170	3	443,78,39,	0,635,1715,
#Partially deleted in new
chr17	50108000	50110209	chr17:50108000-50110209	0	+	50108000	50108000	8553170	5	232,99,108,114,253,	0,318,611,1286,1956,
#Partially deleted in new
chr17	50108007	50109984	chr17:50108007-50109984	0	+	50108007	50108007	8553170	4	410,108,114,28,	0,604,1279,1949,
#Partially deleted in new
chr17	50110039	50129822	chr17:50110039-50129822	3	-	50112892	50124959	789624	10	3009,156,120,160,75,88,289,167,55,306,	0,3884,4147,5524,5790,5963,7367,8121,14877,19477,
#Partially deleted in new
chr17	50111308	50124162	chr17:50111308-50124162	0	-	50112892	50124162	789624	9	1740,156,120,160,75,88,289,167,79,	0,2615,2878,4255,4521,4694,6098,6852,12775,
#Partially deleted in new
chr17	50111335	50117799	chr17:50111335-50117799	0	-	50111335	50111335	8553170	7	1713,156,120,160,75,88,393,	0,2588,2851,4228,4494,4667,6071,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	50112668	50115024	chr17:50112668-50115024	0	-	50112668	50112668	8553170	1	2356,	0,
#Partially deleted in new
chr17	50112670	50129882	chr17:50112670-50129882	1	-	50112892	50124959	789624	11	378,156,120,84,160,75,88,289,167,55,366,	0,1253,1516,1686,2893,3159,3332,4736,5490,12246,16846,
#Deleted in new
chr17	50114227	50116287	chr17:50114227-50116287	0	-	50114227	50114227	8553170	4	79,160,75,285,	0,1336,1602,1775,
#Partially deleted in new
chr17	50116002	50123598	chr17:50116002-50123598	0	-	50116002	50116002	8553170	4	226,289,167,73,	0,1404,2158,7523,
#Partially deleted in new
chr17	50118052	50129796	chr17:50118052-50129796	0	-	50118052	50118052	8553170	3	275,55,280,	0,6864,11464,
#Partially deleted in new
chr17	50124919	50129754	chr17:50124919-50129754	0	-	50124919	50124959	789624	3	52,270,238,	0,171,4597,
#Partially deleted in new
chr17	50125116	50129814	chr17:50125116-50129814	0	-	50125116	50125116	8553170	2	209,298,	0,4400,
#Partially deleted in new
chr17	50133734	50150630	chr17:50133734-50150630	3	-	50135330	50150513	789624	10	1650,97,230,54,153,136,105,121,133,1488,	0,1818,2233,5528,5694,6358,7534,9863,11378,15408,
#Partially deleted in new
chr17	50135585	50146176	chr17:50135585-50146176	3	+	50135585	50135585	8553170	4	92,116,108,152,	0,1707,9537,10439,
#Partially deleted in new
chr17	50139459	50145152	chr17:50139459-50145152	0	-	50139459	50139459	8553170	5	122,267,105,121,40,	0,633,1809,4138,5653,
#Partially deleted in new
chr17	50163522	50165316	chr17:50163522-50165316	3	-	50163522	50163522	8553170	1	1794,	0,
#Partially deleted in new
chr17	50164213	50175850	chr17:50164213-50175850	0	+	50164213	50164213	8553170	6	103,73,199,27,193,139,	0,3733,4160,6426,11043,11498,
#Partially deleted in new
chr17	50165984	50168570	chr17:50165984-50168570	0	+	50166040	50167469	789624	4	152,120,73,197,	0,1383,1962,2389,
#Partially deleted in new
chr17	50166003	50175797	chr17:50166003-50175797	0	+	50166040	50175379	789624	9	74,120,155,73,199,163,27,193,86,	0,1364,1578,1943,2370,3088,4636,9253,9708,
#Partially deleted in new
chr17	50166004	50175931	chr17:50166004-50175931	3	+	50166040	50175437	789624	10	73,120,155,73,199,163,209,27,193,220,	0,1363,1577,1942,2369,3087,4138,4635,9252,9707,
#Partially deleted in new
chr17	50166004	50175928	chr17:50166004-50175928	1	+	50166040	50175437	789624	8	73,120,155,73,199,27,193,217,	0,1363,1577,1942,2369,4635,9252,9707,
#Partially deleted in new
chr17	50166008	50169979	chr17:50166008-50169979	0	+	50166040	50167975	789624	5	69,120,73,199,888,	0,1359,1938,2365,3083,
#Partially deleted in new
chr17	50166044	50175928	chr17:50166044-50175928	0	+	50166044	50175851	789624	6	33,73,199,27,119,217,	0,1902,2329,4595,9212,9667,
#Partially deleted in new
chr17	50167580	50175387	chr17:50167580-50175387	0	+	50167580	50167975	789624	5	147,73,199,27,131,	0,366,793,3059,7676,
#Partially deleted in new
chr17	50168521	50175914	chr17:50168521-50175914	0	+	50168521	50175437	789624	6	51,13,209,27,193,203,	0,570,1621,2118,6735,7190,
#Partially deleted in new
chr17	50171427	50181178	chr17:50171427-50181178	7	-	50171427	50171427	16724991	2	750,469,	0,9282,
#Partially deleted in new
chr17	50171513	50171936	chr17:50171513-50171936	5	-	50171513	50171513	16724991	1	423,	0,
#Partially deleted in new
chr17	50172404	50175900	chr17:50172404-50175900	0	+	50172404	50172404	8553170	3	28,193,189,	0,2852,3307,
#Deleted in new
chr17	50175172	50175928	chr17:50175172-50175928	0	+	50175172	50175172	8553170	2	277,217,	0,539,
#Partially deleted in new
chr17	50183288	50201632	chr17:50183288-50201632	3	-	50185501	50201513	789624	51	2360,243,191,283,108,54,108,54,108,54,108,108,162,54,54,108,54,54,108,108,99,45,54,54,54,54,99,54,99,54,108,54,99,45,99,54,45,54,45,54,54,54,54,54,45,72,102,36,35,195,222,	0,2489,3028,3351,3726,4195,4587,4807,5241,5453,5614,5879,6088,6390,6570,6712,7038,7254,7528,8094,8499,8691,9186,9351,9508,9705,10654,10841,11060,11284,11432,11758,11943,12145,12278,12634,12866,13025,13195,13328,13721,13891,14443,14660,14872,15144,15937,16129,16267,16464,18122,
#Deleted in new
chr17	50185843	50187122	chr17:50185843-50187122	0	-	50185843	50185843	8553170	2	664,483,	0,796,
#Deleted in new
chr17	50187606	50188554	chr17:50187606-50188554	0	-	50187606	50187606	8553170	2	377,459,	0,489,
#Deleted in new
chr17	50187891	50188784	chr17:50187891-50188784	0	-	50187891	50187891	8553170	2	746,43,	0,850,
#Deleted in new
chr17	50190308	50190924	chr17:50190308-50190924	0	-	50190308	50190308	8553170	2	288,108,	0,508,
#Partially deleted in new
chr17	50190908	50194058	chr17:50190908-50194058	0	-	50190908	50190908	8553170	9	16,108,99,45,54,54,54,54,116,	0,474,879,1071,1566,1731,1888,2085,3034,
#Deleted in new
chr17	50191865	50192439	chr17:50191865-50192439	0	-	50191865	50191865	8553170	2	21,460,	0,114,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	50193485	50194352	chr17:50193485-50194352	0	-	50193485	50193485	8553170	3	556,54,4,	0,644,863,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	50193549	50195665	chr17:50193549-50195665	0	-	50193549	50193549	8553170	8	634,99,54,108,54,99,45,99,	0,799,1023,1171,1497,1682,1884,2017,
#Deleted in new
chr17	50196078	50196595	chr17:50196078-50196595	0	-	50196078	50196078	8553170	2	121,282,	0,235,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	50196519	50198702	chr17:50196519-50198702	0	-	50196519	50196519	8553170	8	9,54,54,54,54,54,45,270,	0,97,490,660,1212,1429,1641,1913,
#Deleted in new
chr17	50199277	50201632	chr17:50199277-50201632	0	-	50199277	50199277	8553170	4	50,173,195,222,	0,140,475,2133,
#Deleted in new
chr17	50199288	50200191	chr17:50199288-50200191	0	-	50199288	50200104	789624	4	39,36,35,439,	0,129,267,464,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	50208943	50215922	chr17:50208943-50215922	3	+	50208943	50208943	8553170	7	180,71,81,216,366,63,812,	0,392,4891,5157,5466,5976,6167,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	50208971	50214459	chr17:50208971-50214459	0	+	50208971	50208971	8553170	5	152,71,176,81,359,	0,364,2974,4863,5129,
#Deleted in new
chr17	50235844	50236129	chr17:50235844-50236129	7	+	50235844	50235844	16724991	1	285,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	50271405	50281485	chr17:50271405-50281485	3	+	50274501	50279308	789624	6	84,95,26,75,196,2291,	0,3070,6309,7150,7395,7789,
#Partially deleted in new
chr17	50274426	50279326	chr17:50274426-50279326	1	+	50274501	50279308	789624	5	144,26,75,196,132,	0,3288,4129,4374,4768,
#Partially deleted in new
chr17	50274878	50279116	chr17:50274878-50279116	0	+	50274878	50274878	8553170	4	165,26,75,316,	0,2836,3677,3922,
#Partially deleted in new
chr17	50346091	50361151	chr17:50346091-50361151	3	+	50346140	50360291	789624	11	184,493,176,203,81,217,177,263,196,334,1183,	0,7538,8316,8762,9409,9689,9993,10419,10965,12115,13877,
#Partially deleted in new
chr17	50346130	50353674	chr17:50346130-50353674	0	+	50346140	50353674	789624	2	100,45,	0,7499,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	50346134	50363138	chr17:50346134-50363138	1	+	50346140	50363068	789624	10	141,493,176,203,81,217,177,263,196,160,	0,7495,8273,8719,9366,9646,9950,10376,10922,16844,
#Partially deleted in new
chr17	50346135	50361151	chr17:50346135-50361151	0	+	50346140	50358381	789624	10	140,493,176,203,81,217,177,263,334,1183,	0,7494,8272,8718,9365,9645,9949,10375,12071,13833,
#Partially deleted in new
chr17	50356183	50358317	chr17:50356183-50358317	0	+	50356183	50357130	789624	4	78,263,135,111,	0,327,934,2023,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	50357165	50358066	chr17:50357165-50358066	0	+	50357165	50357306	789624	1	901,	0,
#Deleted in new
chr17	50358977	50361151	chr17:50358977-50361151	0	+	50358977	50358977	8553170	1	2174,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	50362966	50365232	chr17:50362966-50365232	3	-	50362966	50362966	8553170	1	2266,	0,
#Partially deleted in new
chr17	50367856	50372960	chr17:50367856-50372960	1	-	50368091	50370461	789624	4	442,68,132,90,	0,2175,2598,5014,
#Deleted in new
chr17	50367864	50370573	chr17:50367864-50370573	0	-	50368091	50370573	789624	3	449,68,119,	0,2167,2590,
#Partially deleted in new
chr17	50367866	50373214	chr17:50367866-50373214	3	-	50368091	50373170	0	4	432,68,132,84,	0,2165,2588,5264,
#Partially deleted in new
chr17	50367867	50373207	chr17:50367867-50373207	1	-	50369986	50373170	789624	3	2232,132,77,	0,2587,5263,
#Partially deleted in new
chr17	50367867	50373196	chr17:50367867-50373196	1	-	50368852	50373170	789624	5	446,30,68,132,66,	0,970,2164,2587,5263,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	50367887	50371163	chr17:50367887-50371163	1	-	50368091	50370461	789624	4	411,68,132,258,	0,2144,2567,3018,
#Partially deleted in new
chr17	50370234	50373175	chr17:50370234-50373175	0	-	50370234	50370234	8553170	2	352,45,	0,2896,
#Partially deleted in new
chr17	50373219	50381483	chr17:50373219-50381483	3	+	50375208	50380939	0	9	58,799,128,87,122,118,116,190,721,	0,1965,2846,5375,5554,5887,6232,7092,7543,
#Partially deleted in new
chr17	50373219	50381459	chr17:50373219-50381459	1	+	50375208	50380939	0	9	58,799,128,87,122,157,116,190,697,	0,1965,2846,5375,5554,5848,6232,7092,7543,
#Partially deleted in new
chr17	50373241	50376193	chr17:50373241-50376193	0	+	50375208	50375798	789624	4	36,328,187,128,	0,1943,2555,2824,
#Partially deleted in new
chr17	50373253	50380187	chr17:50373253-50380187	0	+	50373253	50373253	8553170	7	24,328,128,82,122,118,736,	0,1931,2812,5346,5520,5853,6198,
#Partially deleted in new
chr17	50373253	50378681	chr17:50373253-50378681	0	+	50375208	50378681	789624	4	24,328,128,82,	0,1931,2812,5346,
#Partially deleted in new
chr17	50375058	50385134	chr17:50375058-50385134	0	-	50375728	50385134	789624	3	262,159,17,	0,666,10059,
#Partially deleted in new
chr17	50375184	50381459	chr17:50375184-50381459	1	+	50375208	50380939	0	8	799,128,87,122,157,116,190,697,	0,881,3410,3589,3883,4267,5127,5578,
#Partially deleted in new
chr17	50375687	50380802	chr17:50375687-50380802	0	+	50375687	50380802	789624	7	296,128,122,118,116,190,40,	0,378,3086,3419,3764,4624,5075,
#Partially deleted in new
chr17	50376108	50379601	chr17:50376108-50379601	0	+	50376108	50376108	8553170	5	85,87,122,118,150,	0,2486,2665,2998,3343,
#Deleted in new
chr17	50378882	50380315	chr17:50378882-50380315	0	+	50378882	50378882	8553170	3	342,116,4,	0,569,1429,
#Deleted in new
chr17	50379758	50381457	chr17:50379758-50381457	0	+	50379758	50379758	8553170	2	743,695,	0,1004,
#Partially deleted in new
chr17	50381237	50397553	chr17:50381237-50397553	3	-	50382987	50397317	789624	7	1998,174,73,105,159,60,341,	0,3880,6822,11160,11501,13691,15975,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	50386144	50386246	chr17:50386144-50386246	3	-	50386144	50386144	8553170	1	102,	0,
#Deleted in new
chr17	50395973	50397504	chr17:50395973-50397504	1	-	50397128	50397317	789624	1	1531,	0,
#Deleted in new
chr17	50396437	50397888	chr17:50396437-50397888	3	+	50396437	50396437	8553170	2	66,649,	0,802,
#Partially deleted in new
chr17	50426157	50474835	chr17:50426157-50474835	3	+	50426261	50474552	789624	16	232,196,129,54,119,166,96,158,92,77,108,152,142,111,69,334,	0,34519,35084,35475,36026,36262,36998,37237,37660,38060,44870,46270,47507,47736,48041,48344,
#Partially deleted in new
chr17	50426157	50474670	chr17:50426157-50474670	0	+	50426261	50461642	789624	14	232,54,119,166,96,158,92,77,108,152,142,111,69,169,	0,35475,36026,36262,36998,37237,37660,38060,44870,46270,47507,47736,48041,48344,
#Partially deleted in new
chr17	50426217	50461265	chr17:50426217-50461265	0	+	50426261	50460238	789624	4	172,162,196,24,	0,33984,34459,35024,
#Partially deleted in new
chr17	50426217	50474670	chr17:50426217-50474670	1	+	50426261	50474552	789624	15	172,196,54,119,166,96,158,92,77,108,152,142,111,69,169,	0,34459,35415,35966,36202,36938,37177,37600,38000,44810,46210,47447,47676,47981,48284,
#Partially deleted in new
chr17	50426217	50461048	chr17:50426217-50461048	0	+	50426217	50426217	8553170	2	172,372,	0,34459,
#Partially deleted in new
chr17	50426217	50462426	chr17:50426217-50462426	0	+	50426261	50462426	789624	6	172,196,46,54,119,7,	0,34459,35024,35415,35966,36202,
#Partially deleted in new
chr17	50426218	50474837	chr17:50426218-50474837	1	+	50426261	50474552	789624	17	171,75,196,129,54,119,166,96,158,92,77,108,152,142,111,69,336,	0,686,34458,35023,35414,35965,36201,36937,37176,37599,37999,44809,46209,47446,47675,47980,48283,
#Partially deleted in new
chr17	50426251	50474831	chr17:50426251-50474831	1	+	50426261	50474552	789624	16	138,196,114,30,119,166,96,158,92,77,108,152,142,111,69,330,	0,34425,34990,35405,35932,36168,36904,37143,37566,37966,44776,46176,47413,47642,47947,48250,
#Partially deleted in new
chr17	50450178	50450725	chr17:50450178-50450725	7	-	50450178	50450178	16724991	2	50,207,	0,340,
#Deleted in new
chr17	50460662	50461411	chr17:50460662-50461411	0	+	50460662	50460662	8553170	2	210,170,	0,579,
#Deleted in new
chr17	50462238	50463041	chr17:50462238-50463041	0	+	50462238	50462238	8553170	2	79,622,	0,181,
#Partially deleted in new
chr17	50462535	50471188	chr17:50462535-50471188	0	+	50462535	50462535	8553170	6	50,26,158,92,77,161,	0,690,859,1282,1682,8492,
#Partially deleted in new
chr17	50463479	50473932	chr17:50463479-50473932	0	+	50463479	50471061	789624	7	73,77,74,108,152,142,39,	0,738,1046,7548,8948,10185,10414,
#Partially deleted in new
chr17	50463515	50472446	chr17:50463515-50472446	0	+	50463515	50471061	789624	6	37,92,77,74,108,19,	0,302,702,1010,7512,8912,
#Partially deleted in new
chr17	50464280	50471400	chr17:50464280-50471400	0	+	50464280	50464280	8553170	3	148,74,373,	0,245,6747,
#Deleted in new
chr17	50464495	50465425	chr17:50464495-50465425	0	-	50465297	50465425	789624	2	462,132,	0,798,
#Partially deleted in new
chr17	50464497	50468966	chr17:50464497-50468966	3	-	50465297	50468813	0	4	552,146,164,927,	0,796,1209,3542,
#Partially deleted in new
chr17	50464498	50468906	chr17:50464498-50468906	1	-	50465297	50468813	0	4	551,157,164,867,	0,784,1208,3541,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	50464543	50473403	chr17:50464543-50473403	0	+	50464543	50464543	8553170	4	56,72,41,537,	0,6484,7995,8323,
#Partially deleted in new
chr17	50467839	50473901	chr17:50467839-50473901	0	+	50467839	50467839	8553170	4	239,108,142,8,	0,3188,5825,6054,
#Deleted in new
chr17	50468328	50471761	chr17:50468328-50471761	0	+	50468328	50468328	8553170	2	104,734,	0,2699,
#Partially deleted in new
chr17	50468342	50474845	chr17:50468342-50474845	0	+	50468342	50468342	789624	6	90,108,142,111,69,344,	0,2685,5322,5551,5856,6159,
#Deleted in new
chr17	50468358	50471065	chr17:50468358-50471065	0	+	50468358	50468358	8553170	3	74,53,38,	0,227,2669,
#Deleted in new
chr17	50469905	50471523	chr17:50469905-50471523	0	+	50469905	50469905	8553170	2	63,496,	0,1122,
#Partially deleted in new
chr17	50470062	50473963	chr17:50470062-50473963	0	+	50470062	50470062	8553170	5	126,108,152,142,70,	0,965,2365,3602,3831,
#Partially deleted in new
chr17	50470930	50473790	chr17:50470930-50473790	0	+	50470930	50470930	8553170	3	205,152,126,	0,1497,2734,
#Partially deleted in new
chr17	50472130	50473760	chr17:50472130-50473760	0	+	50472130	50472130	8553170	2	449,96,	0,1534,
#Partially deleted in new
chr17	50472460	50474256	chr17:50472460-50474256	0	+	50472460	50472460	8553170	4	64,142,111,58,	0,1204,1433,1738,
#Partially deleted in new
chr17	50473824	50474774	chr17:50473824-50474774	0	+	50473824	50473824	8553170	2	443,273,	0,677,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	50475818	50478391	chr17:50475818-50478391	3	+	50475818	50475818	8553170	1	2573,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	50478799	50485975	chr17:50478799-50485975	3	+	50478884	50484861	789624	9	220,134,205,366,64,148,55,104,1232,	0,829,1080,3291,3843,4540,4906,5642,5944,
#Deleted in new
chr17	50478859	50480629	chr17:50478859-50480629	0	+	50478859	50478859	8553170	3	160,134,750,	0,769,1020,
#Partially deleted in new
chr17	50478859	50484897	chr17:50478859-50484897	0	+	50478884	50483426	789624	5	160,366,148,201,154,	0,3231,4480,5582,5884,
#Partially deleted in new
chr17	50478902	50484819	chr17:50478902-50484819	0	+	50478902	50482097	789624	8	117,134,366,64,148,55,104,76,	0,726,3188,3740,4437,4803,5539,5841,
#Deleted in new
chr17	50479047	50479918	chr17:50479047-50479918	0	+	50479703	50479918	789624	3	381,134,39,	0,581,832,
#Partially deleted in new
chr17	50482096	50484998	chr17:50482096-50484998	0	+	50482096	50484458	789624	6	360,64,92,55,104,255,	0,546,1243,1609,2345,2647,
#Partially deleted in new
chr17	50482363	50483535	chr17:50482363-50483535	0	+	50482363	50482363	8553170	2	343,196,	0,976,
#Deleted in new
chr17	50484028	50484863	chr17:50484028-50484863	0	+	50484028	50484028	8553170	2	517,120,	0,715,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	50503411	50508328	chr17:50503411-50508328	3	-	50503411	50503411	8553170	2	322,27,	0,4890,
#Partially deleted in new
chr17	50508383	50531497	chr17:50508383-50531497	3	+	50508545	50531428	789624	19	367,128,160,104,184,116,148,116,116,109,190,188,147,387,122,116,146,171,171,	0,8186,8909,9211,10157,10590,11256,12726,12932,13589,14555,15213,16493,17497,18903,19771,20311,20634,22943,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr17	50508383	50530239	chr17:50508383-50530239	1	+	50508656	50530239	789624	20	367,128,160,104,184,116,148,116,116,109,190,188,147,387,122,116,146,171,60,27,	0,8186,8909,9211,10157,10590,11256,12726,12932,13589,14555,15213,16493,17497,18903,19771,20311,20634,21381,21829,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	50508424	50522666	chr17:50508424-50522666	0	+	50508424	50508424	8553170	10	326,128,160,104,184,116,148,116,116,694,	0,8145,8868,9170,10116,10549,11215,12685,12891,13548,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	50508448	50516093	chr17:50508448-50516093	0	+	50508448	50508448	8553170	2	302,235,	0,7410,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	50508489	50510420	chr17:50508489-50510420	1	+	50508545	50509106	789624	2	261,1379,	0,552,
#Partially deleted in new
chr17	50508540	50519089	chr17:50508540-50519089	0	+	50508545	50519089	789624	6	210,128,205,104,184,116,	0,8029,8752,9054,10000,10433,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	50508587	50518633	chr17:50508587-50518633	0	+	50508587	50516594	789624	6	163,105,128,160,104,93,	0,6257,7982,8705,9007,9953,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr17	50508621	50531497	chr17:50508621-50531497	0	+	50508621	50530239	789624	21	129,128,160,104,184,116,148,116,116,109,190,188,147,387,122,116,146,171,60,100,171,	0,7948,8671,8973,9919,10352,11018,12488,12694,13351,14317,14975,16255,17259,18665,19533,20073,20396,21143,21591,22705,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	50519409	50520221	chr17:50519409-50520221	0	+	50519409	50519409	8553170	3	45,148,251,	0,230,561,
#Partially deleted in new
chr17	50520993	50523052	chr17:50520993-50523052	0	+	50520993	50520993	8553170	4	232,116,109,114,	0,322,979,1945,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	50523719	50531501	chr17:50523719-50531501	0	+	50523719	50531354	789624	3	65,227,175,	0,1157,7607,
#Partially deleted in new
chr17	50525972	50528840	chr17:50525972-50528840	0	+	50525972	50527293	789624	4	295,145,116,146,	0,1291,2182,2722,
#Partially deleted in new
chr17	50529177	50531500	chr17:50529177-50531500	0	+	50529177	50529323	789624	2	253,174,	0,2149,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	50530153	50531501	chr17:50530153-50531501	0	+	50530153	50530153	8553170	2	159,175,	0,1173,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	50532542	50543750	chr17:50532542-50543750	3	+	50536556	50542157	789624	10	443,698,119,81,129,88,270,105,231,1907,	0,3878,5536,6341,6644,7704,8250,8686,8921,9301,
#Partially deleted in new
chr17	50532681	50537061	chr17:50532681-50537061	0	+	50536556	50537061	789624	2	163,641,	0,3739,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	50532724	50536591	chr17:50532724-50536591	0	+	50536556	50536591	789624	3	261,171,171,	0,3304,3696,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	50532724	50536709	chr17:50532724-50536709	0	+	50536556	50536709	789624	3	120,171,289,	0,3304,3696,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	50532737	50536754	chr17:50532737-50536754	0	+	50532737	50532737	8553170	4	107,151,205,47,	0,3311,3683,3970,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	50532737	50536346	chr17:50532737-50536346	0	+	50532737	50532737	8553170	2	248,334,	0,3275,
#Partially deleted in new
chr17	50532737	50541941	chr17:50532737-50541941	0	+	50536556	50536791	789624	9	107,205,411,119,129,270,105,231,98,	0,3683,3970,5341,6449,8055,8491,8726,9106,
#Partially deleted in new
chr17	50532737	50542486	chr17:50532737-50542486	0	+	50536556	50536791	789624	10	248,205,411,119,129,88,270,105,231,643,	0,3683,3970,5341,6449,7509,8055,8491,8726,9106,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	50532737	50536379	chr17:50532737-50536379	0	+	50532737	50532737	8553170	2	248,351,	0,3291,
#Partially deleted in new
chr17	50532737	50536536	chr17:50532737-50536536	0	+	50532737	50532737	8553170	2	185,116,	0,3683,
#Partially deleted in new
chr17	50532757	50542364	chr17:50532757-50542364	0	+	50536556	50538184	789624	8	228,698,78,129,270,105,231,521,	0,3663,5362,6429,8035,8471,8706,9086,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	50532763	50536470	chr17:50532763-50536470	0	+	50532763	50532763	8553170	3	222,250,50,	0,3265,3657,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	50534491	50536726	chr17:50534491-50536726	0	+	50536673	50536726	789624	3	161,254,143,	0,1537,2092,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	50534551	50536803	chr17:50534551-50536803	0	+	50534551	50534551	8553170	4	101,171,205,96,	0,1477,1869,2156,
#Partially deleted in new
chr17	50534554	50536882	chr17:50534554-50536882	0	+	50536556	50536882	789624	2	98,462,	0,1866,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	50534557	50536964	chr17:50534557-50536964	0	+	50536556	50536964	789624	3	95,171,544,	0,1471,1863,
#Partially deleted in new
chr17	50536426	50542496	chr17:50536426-50542496	1	+	50536556	50540269	789624	10	692,119,81,129,131,270,105,231,268,197,	0,1652,2457,2760,3777,4366,4802,5037,5417,5873,
#Partially deleted in new
chr17	50536426	50542121	chr17:50536426-50542121	0	+	50536556	50540269	789624	9	692,119,81,129,131,270,105,231,278,	0,1652,2457,2760,3777,4366,4802,5037,5417,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	50537293	50538754	chr17:50537293-50538754	3	-	50537293	50537293	789624	3	208,235,164,	0,633,1297,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	50537298	50538440	chr17:50537298-50538440	0	-	50537298	50537298	8553170	2	203,514,	0,628,
#Partially deleted in new
chr17	50543057	50555850	chr17:50543057-50555850	0	+	50547208	50547719	789624	18	478,176,218,103,171,65,155,144,202,328,75,210,193,169,212,200,81,359,	0,3248,4010,4607,5225,5496,5752,5985,6228,6927,7478,7650,7940,8453,8911,11193,12174,12434,
#Partially deleted in new
chr17	50547088	50555852	chr17:50547088-50555852	3	+	50547208	50555662	789624	17	197,48,171,65,155,144,202,131,105,75,210,193,169,212,200,81,361,	0,631,1194,1465,1721,1954,2197,2896,3119,3447,3619,3909,4422,4880,7162,8143,8403,
#Partially deleted in new
chr17	50547088	50555850	chr17:50547088-50555850	1	+	50548337	50555662	789624	16	281,187,65,155,144,202,131,105,75,210,193,169,212,200,81,359,	0,1178,1465,1721,1954,2197,2896,3119,3447,3619,3909,4422,4880,7162,8143,8403,
#Partially deleted in new
chr17	50547125	50555852	chr17:50547125-50555852	1	+	50547208	50555662	789624	16	160,171,65,155,144,202,131,105,75,210,193,169,212,200,81,361,	0,1157,1428,1684,1917,2160,2859,3082,3410,3582,3872,4385,4843,7125,8106,8366,
#Partially deleted in new
chr17	50547126	50555850	chr17:50547126-50555850	0	+	50547208	50547719	789624	17	159,103,171,65,155,144,202,131,105,75,210,193,169,212,200,81,359,	0,538,1156,1427,1683,1916,2159,2858,3081,3409,3581,3871,4384,4842,7124,8105,8365,
#Deleted in new
chr17	50547128	50548618	chr17:50547128-50548618	0	+	50547208	50547846	789624	4	157,235,171,65,	0,591,1154,1425,
#Deleted in new
chr17	50547152	50549329	chr17:50547152-50549329	0	+	50547208	50548088	789624	8	133,48,119,171,65,155,144,44,	0,567,890,1130,1401,1657,1890,2133,
#Deleted in new
chr17	50547160	50548863	chr17:50547160-50548863	0	+	50547208	50547719	789624	4	125,103,171,54,	0,504,1122,1649,
#Deleted in new
chr17	50547179	50548172	chr17:50547179-50548172	0	+	50547179	50547179	8553170	2	106,453,	0,540,
#Deleted in new
chr17	50547183	50549304	chr17:50547183-50549304	0	+	50547208	50547719	789624	8	102,103,119,171,65,155,144,19,	0,481,859,1099,1370,1626,1859,2102,
#Deleted in new
chr17	50547204	50550891	chr17:50547204-50550891	0	+	50547208	50547719	789624	8	81,290,171,65,155,144,328,356,	0,460,1078,1349,1605,1838,2780,3331,
#Deleted in new
chr17	50547204	50548581	chr17:50547204-50548581	0	+	50547204	50547204	8553170	4	81,290,171,28,	0,460,1078,1349,
#Deleted in new
chr17	50547208	50548902	chr17:50547208-50548902	0	+	50547208	50547208	8553170	4	77,48,336,93,	0,511,1074,1601,
#Deleted in new
chr17	50547208	50548703	chr17:50547208-50548703	0	+	50547208	50547208	8553170	2	77,421,	0,1074,
#Partially deleted in new
chr17	50547998	50555852	chr17:50547998-50555852	0	+	50548084	50551516	789624	16	163,171,65,155,144,202,131,105,75,210,225,169,212,200,81,361,	0,284,555,811,1044,1287,1986,2209,2537,2709,2999,3512,3970,6252,7233,7493,
#Partially deleted in new
chr17	50548012	50555852	chr17:50548012-50555852	0	+	50548012	50548012	8553170	14	149,171,65,155,144,202,131,105,75,210,1183,200,81,361,	0,270,541,797,1030,1273,1972,2195,2523,2695,2985,6238,7219,7479,
#Deleted in new
chr17	50548018	50550802	chr17:50548018-50550802	0	+	50548018	50548018	8553170	8	143,171,65,377,202,328,75,95,	0,264,535,791,1267,1966,2517,2689,
#Partially deleted in new
chr17	50548048	50555852	chr17:50548048-50555852	1	+	50548084	50555662	789624	16	113,171,65,155,144,202,131,105,75,210,193,169,212,200,81,361,	0,234,505,761,994,1237,1936,2159,2487,2659,2949,3462,3920,6202,7183,7443,
#Deleted in new
chr17	50548059	50548814	chr17:50548059-50548814	0	+	50548059	50548059	8553170	3	102,171,261,	0,223,494,
#Deleted in new
chr17	50548072	50551356	chr17:50548072-50551356	0	+	50548072	50548072	8553170	11	89,171,65,155,144,202,131,105,75,210,359,	0,210,481,737,970,1213,1912,2135,2463,2635,2925,
#Deleted in new
chr17	50548075	50549409	chr17:50548075-50549409	0	+	50548075	50548075	8553170	5	86,336,155,144,124,	0,207,734,967,1210,
#Deleted in new
chr17	50548849	50551072	chr17:50548849-50551072	0	+	50548849	50550602	789624	8	115,144,202,131,83,75,210,75,	0,193,436,1135,1380,1686,1858,2148,
#Deleted in new
chr17	50548882	50550851	chr17:50548882-50550851	0	+	50548882	50548882	8553170	6	82,144,202,328,75,144,	0,160,403,1102,1653,1825,
#Deleted in new
chr17	50550107	50551384	chr17:50550107-50551384	0	+	50550107	50550107	8553170	4	205,75,210,387,	0,428,600,890,
#Deleted in new
chr17	50550211	50551669	chr17:50550211-50551669	0	+	50550211	50550211	8553170	4	101,75,483,159,	0,324,496,1299,
#Deleted in new
chr17	50550271	50551985	chr17:50550271-50551985	0	+	50550271	50551516	789624	5	41,75,210,169,17,	0,264,436,1239,1697,
#Deleted in new
chr17	50550399	50551108	chr17:50550399-50551108	0	+	50550399	50550399	8553170	2	518,111,	0,598,
#Deleted in new
chr17	50550733	50551939	chr17:50550733-50551939	0	+	50550733	50550733	8553170	3	184,193,429,	0,264,777,
#Deleted in new
chr17	50556206	50562108	chr17:50556206-50562108	3	-	50556206	50556206	789624	2	1252,181,	0,5721,
#Deleted in new
chr17	50556603	50559450	chr17:50556603-50559450	0	-	50556603	50556603	8553170	2	855,146,	0,2701,
#Deleted in new
chr17	50557173	50559410	chr17:50557173-50559410	0	-	50557173	50557173	8553170	2	285,83,	0,2154,
#Partially deleted in new
chr17	50561067	50627465	chr17:50561067-50627465	1	+	50561459	50626751	789624	36	634,112,134,98,160,301,93,784,377,152,186,115,156,85,194,432,101,124,69,185,127,126,90,214,152,110,134,71,79,122,354,144,135,169,170,1449,	0,7802,8097,8638,10810,11486,11953,14475,17120,29403,30367,30671,30869,35494,35662,38360,39658,39983,41752,41947,43087,44830,45832,46759,54293,55207,56370,56791,56980,57154,57587,58615,60592,62839,63292,64949,
#Partially deleted in new
chr17	50561067	50627070	chr17:50561067-50627070	1	+	50561459	50626751	789624	35	634,112,134,98,160,301,93,784,377,152,186,115,156,85,194,432,101,124,69,185,127,126,90,193,54,152,110,134,71,79,122,354,169,170,1054,	0,7802,8097,8638,10810,11486,11953,14475,17120,29403,30367,30671,30869,35494,35662,38360,39658,39983,41752,41947,43087,44830,45832,46759,48814,54293,55207,56370,56791,56980,57154,57587,62839,63292,64949,
#Partially deleted in new
chr17	50561087	50627474	chr17:50561087-50627474	1	+	50561459	50626751	789624	34	614,112,134,98,160,301,93,784,377,152,186,115,156,85,194,432,101,124,69,185,127,126,90,214,152,110,134,71,79,122,354,169,170,1458,	0,7782,8077,8618,10790,11466,11933,14455,17100,29383,30347,30651,30849,35474,35642,38340,39638,39963,41732,41927,43067,44810,45812,46739,54273,55187,56350,56771,56960,57134,57567,62819,63272,64929,
#Partially deleted in new
chr17	50561284	50627070	chr17:50561284-50627070	1	+	50561459	50626751	789624	34	417,112,134,98,160,301,93,784,377,152,186,115,156,85,194,432,101,124,69,185,127,126,90,193,152,110,134,71,79,122,354,169,170,1054,	0,7585,7880,8421,10593,11269,11736,14258,16903,29186,30150,30454,30652,35277,35445,38143,39441,39766,41535,41730,42870,44613,45615,46542,54076,54990,56153,56574,56763,56937,57370,62622,63075,64732,
#Partially deleted in new
chr17	50561431	50606472	chr17:50561431-50606472	1	+	50561459	50606269	789624	23	270,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,575,	0,7438,7733,8274,10446,11122,11589,14111,16756,29039,30003,30307,30505,33561,35130,35298,37996,39294,39619,41388,41583,42723,44466,
#Partially deleted in new
chr17	50561459	50627265	chr17:50561459-50627265	1	+	50561459	50626751	789624	35	242,112,134,98,160,301,93,784,377,152,186,115,156,85,194,432,101,124,69,185,127,126,90,214,152,110,134,71,79,122,354,169,170,66,946,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,53901,54815,55978,56399,56588,56762,57195,62447,62900,64557,64860,
#Partially deleted in new
chr17	50561459	50627265	chr17:50561459-50627265	3	+	50561459	50626751	789624	38	242,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,126,90,193,54,152,110,134,71,79,122,354,144,135,169,170,1249,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,33533,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,48422,53901,54815,55978,56399,56588,56762,57195,58223,60200,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50627070	chr17:50561459-50627070	1	+	50561459	50626751	789624	35	242,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,126,90,193,152,110,134,71,79,122,354,169,170,1054,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,33533,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,53901,54815,55978,56399,56588,56762,57195,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626751	chr17:50561459-50626751	1	+	50561459	50626751	789624	36	242,112,134,98,160,301,93,784,377,152,186,115,156,85,194,432,101,124,69,185,127,126,90,193,54,152,110,134,71,79,122,354,135,169,170,735,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,48422,53901,54815,55978,56399,56588,56762,57195,60200,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	0	+	50561459	50618296	789624	35	242,112,134,98,160,301,93,784,377,152,186,115,156,85,194,432,101,124,69,185,127,126,90,193,54,152,110,134,71,30,122,354,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,48422,53901,54815,55978,56399,56637,56762,57195,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	1	+	50561459	50626751	789624	36	242,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,126,90,91,54,152,110,134,71,79,122,354,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,33533,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46469,48422,53901,54815,55978,56399,56588,56762,57195,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	0	+	50561459	50618296	789624	34	242,112,134,98,160,301,93,784,377,152,186,115,156,85,194,432,101,124,69,185,127,126,90,193,152,110,134,71,30,122,354,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,53901,54815,55978,56399,56637,56762,57195,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	0	+	50561459	50618296	789624	35	242,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,126,90,214,152,110,134,71,30,122,354,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,33533,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,53901,54815,55978,56399,56637,56762,57195,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	1	+	50561459	50626751	789624	37	242,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,126,90,193,54,152,110,134,71,79,122,354,169,170,66,447,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,33533,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,48422,53901,54815,55978,56399,56588,56762,57195,62447,62900,64557,64860,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	0	+	50561459	50618296	789624	36	242,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,126,90,193,54,152,110,134,71,30,122,354,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,33533,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,48422,53901,54815,55978,56399,56637,56762,57195,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	1	+	50561459	50626751	789624	37	242,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,126,90,214,152,110,134,71,79,122,354,144,135,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,33533,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,53901,54815,55978,56399,56588,56762,57195,58223,60200,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	1	+	50561459	50626751	789624	37	242,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,126,90,193,54,152,110,134,71,79,122,354,144,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,33533,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,48422,53901,54815,55978,56399,56588,56762,57195,58223,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	1	+	50561459	50626751	789624	36	242,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,126,90,193,54,152,110,134,50,79,122,354,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,33533,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,48422,53901,54815,55978,56399,56588,56762,57195,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	1	+	50561459	50626751	789624	36	242,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,126,90,214,152,110,134,71,79,122,354,169,170,66,447,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,33533,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,53901,54815,55978,56399,56588,56762,57195,62447,62900,64557,64860,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	1	+	50561459	50626751	789624	35	242,112,134,98,160,301,93,784,377,152,186,115,156,85,194,432,101,124,69,185,127,126,90,214,152,110,134,71,79,122,354,144,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,53901,54815,55978,56399,56588,56762,57195,58223,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	1	+	50561459	50626751	789624	35	242,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,126,90,91,152,110,134,71,79,122,354,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,33533,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46469,53901,54815,55978,56399,56588,56762,57195,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	0	+	50561459	50618296	789624	35	242,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,126,90,193,152,110,134,71,30,122,354,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,33533,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,53901,54815,55978,56399,56637,56762,57195,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	0	+	50561459	50618296	789624	35	242,112,134,98,160,301,93,784,377,152,186,115,156,85,194,432,101,124,69,185,127,126,90,193,54,152,110,134,50,30,122,354,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,48422,53901,54815,55978,56399,56637,56762,57195,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	1	+	50561459	50626751	789624	35	242,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,126,90,214,152,110,134,71,79,122,354,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,33533,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,53901,54815,55978,56399,56588,56762,57195,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	1	+	50561459	50626751	789624	36	242,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,126,90,112,152,110,134,71,79,122,354,144,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,33533,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46469,53901,54815,55978,56399,56588,56762,57195,58223,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	1	+	50561459	50626751	789624	35	242,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,126,90,112,152,110,134,71,79,122,354,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,33533,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46469,53901,54815,55978,56399,56588,56762,57195,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	1	+	50561459	50626751	789624	36	242,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,126,90,214,54,152,110,134,71,79,122,354,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,33533,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,48422,53901,54815,55978,56399,56588,56762,57195,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	1	+	50561459	50626751	789624	35	242,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,126,90,193,152,110,134,50,79,122,354,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,33533,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,53901,54815,55978,56399,56588,56762,57195,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	1	+	50561459	50626751	789624	35	242,112,134,98,160,301,93,784,377,152,186,115,156,85,194,432,101,124,69,185,127,126,90,91,54,152,110,134,71,79,122,354,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46469,48422,53901,54815,55978,56399,56588,56762,57195,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	1	+	50561459	50626751	789624	36	242,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,126,90,193,54,152,110,134,71,79,122,354,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,33533,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,48422,53901,54815,55978,56399,56588,56762,57195,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	1	+	50561459	50626751	789624	36	242,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,126,90,193,152,110,134,71,79,122,354,144,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,33533,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,53901,54815,55978,56399,56588,56762,57195,58223,62447,62900,64557,
#Partially deleted in new
chr17	50561459	50626766	chr17:50561459-50626766	1	+	50561459	50626751	789624	36	242,112,134,98,160,301,93,784,377,152,186,115,156,69,85,194,432,101,124,69,185,127,126,90,214,152,110,134,71,79,122,354,144,169,170,750,	0,7410,7705,8246,10418,11094,11561,14083,16728,29011,29975,30279,30477,33533,35102,35270,37968,39266,39591,41360,41555,42695,44438,45440,46367,53901,54815,55978,56399,56588,56762,57195,58223,62447,62900,64557,
#Deleted in new
chr17	50563202	50563783	chr17:50563202-50563783	3	-	50563202	50563202	8553170	2	69,87,	0,494,
#Partially deleted in new
chr17	50569164	50573674	chr17:50569164-50573674	0	+	50569164	50573253	789624	6	134,98,160,301,93,469,	0,541,2713,3389,3856,4041,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	50599724	50607510	chr17:50599724-50607510	0	+	50599724	50607046	789624	8	135,101,124,69,185,127,126,611,	0,1001,1326,3095,3290,4430,6173,7175,
#Partially deleted in new
chr17	50627031	50631940	chr17:50627031-50631940	3	-	50627031	50627031	8553170	2	309,201,	0,4708,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	50634776	50635915	chr17:50634776-50635915	1	+	50634936	50635539	789624	4	34,60,169,393,	0,145,438,746,
#Partially deleted in new
chr17	50634813	50659368	chr17:50634813-50659368	0	+	50634936	50643635	789624	8	168,113,177,126,138,126,62,132,	0,8735,21018,21888,22232,23268,23621,24423,
#Partially deleted in new
chr17	50634856	50692252	chr17:50634856-50692252	3	+	50634936	50691200	789624	31	125,177,126,138,126,62,132,192,178,162,93,204,147,88,67,127,177,168,190,115,145,208,311,200,127,102,147,159,167,195,1161,	0,20975,21845,22189,23225,23578,24380,26066,28824,29093,30296,32697,33006,33573,33996,34283,34495,38114,38612,40505,40774,41026,41421,42887,43236,44941,48753,49092,49852,52679,56235,
#Partially deleted in new
chr17	50634856	50667923	chr17:50634856-50667923	1	+	50634936	50667841	789624	12	125,177,126,138,126,62,132,192,178,162,93,370,	0,20975,21845,22189,23225,23578,24380,26066,28824,29093,30296,32697,
#Partially deleted in new
chr17	50634900	50691702	chr17:50634900-50691702	0	+	50634936	50667600	789624	30	81,177,126,138,126,62,187,192,178,162,93,204,147,88,67,127,177,168,190,115,145,208,311,476,102,147,159,167,195,611,	0,20931,21801,22145,23181,23534,24281,26022,28780,29049,30252,32653,32962,33529,33952,34239,34451,38070,38568,40461,40730,40982,41377,42843,44897,48709,49048,49808,52635,56191,
#Partially deleted in new
chr17	50634900	50691702	chr17:50634900-50691702	0	+	50634936	50678082	789624	30	81,177,126,138,126,62,132,192,178,162,93,204,147,88,67,127,177,168,190,115,145,208,311,476,102,147,159,167,195,611,	0,20931,21801,22145,23181,23534,24336,26022,28780,29049,30252,32653,32962,33529,33952,34239,34451,38070,38568,40461,40730,40982,41377,42843,44897,48709,49048,49808,52635,56191,
#Partially deleted in new
chr17	50658142	50663855	chr17:50658142-50663855	0	+	50658142	50658500	789624	4	65,112,132,175,	0,292,1094,5538,
#Partially deleted in new
chr17	50662151	50667594	chr17:50662151-50667594	0	+	50662151	50662151	8553170	5	108,178,162,93,41,	0,1529,1798,3001,5402,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	50663159	50664721	chr17:50663159-50664721	0	+	50663159	50663159	8553170	1	1562,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	50663742	50664353	chr17:50663742-50664353	0	+	50663742	50663742	8553170	2	116,404,	0,207,
#Partially deleted in new
chr17	50668429	50673120	chr17:50668429-50673120	0	+	50668429	50668429	8553170	4	88,127,177,150,	0,710,922,4541,
#Partially deleted in new
chr17	50672971	50676090	chr17:50672971-50676090	0	+	50672971	50673142	789624	5	198,190,115,145,208,	0,497,2390,2659,2911,
#Partially deleted in new
chr17	50673024	50675774	chr17:50673024-50675774	0	+	50673024	50673024	8553170	4	114,190,115,121,	0,444,2337,2629,
#Partially deleted in new
chr17	50673614	50678102	chr17:50673614-50678102	0	+	50673614	50678102	789624	7	44,115,145,208,176,200,10,	0,1747,2016,2268,2663,4129,4478,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	50674215	50676289	chr17:50674215-50676289	0	+	50674215	50674215	8553170	5	235,115,145,208,12,	0,1146,1415,1667,2062,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	50678898	50691699	chr17:50678898-50691699	0	+	50678898	50678898	8553170	6	1001,147,159,167,195,608,	0,4711,5050,5810,8637,12193,
#Partially deleted in new
chr17	50687308	50691244	chr17:50687308-50691244	0	+	50687308	50687308	8553170	2	422,153,	0,3783,
#Partially deleted in new
chr17	50687412	50688475	chr17:50687412-50688475	0	+	50687412	50687412	8553170	2	318,65,	0,998,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	50693189	50707924	chr17:50693189-50707924	3	-	50695996	50707654	789624	5	2954,182,495,149,404,	0,3750,6209,7378,14331,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	50693447	50695449	chr17:50693447-50695449	3	+	50693447	50693447	8553170	2	580,90,	0,1912,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	50696643	50696760	chr17:50696643-50696760	3	+	50696643	50696643	8553170	1	117,	0,
#Partially deleted in new
chr17	50699576	50701098	chr17:50699576-50701098	0	-	50699576	50700616	789624	2	317,531,	0,991,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	50700284	50707655	chr17:50700284-50707655	0	-	50700284	50700284	8553170	2	432,135,	0,7236,
#Partially deleted in new
chr17	50719543	50756213	chr17:50719543-50756213	3	+	50719732	50750661	789624	10	288,67,40,145,75,105,162,284,161,5713,	0,17416,20762,21558,22113,24162,25108,26176,26998,30957,
#Partially deleted in new
chr17	50719564	50737360	chr17:50719564-50737360	1	+	50719732	50737360	789624	3	267,67,74,	0,17395,17722,
#Partially deleted in new
chr17	50719569	50744813	chr17:50719569-50744813	0	+	50719732	50737360	789624	9	262,67,193,63,40,145,75,105,162,	0,17390,17717,18567,20736,21532,22087,24136,25082,
#Partially deleted in new
chr17	50719596	50741292	chr17:50719596-50741292	0	+	50719596	50719596	8553170	4	235,67,40,191,	0,17363,20709,21505,
#Partially deleted in new
chr17	50719597	50738196	chr17:50719597-50738196	0	+	50719732	50737360	789624	4	234,67,193,88,	0,17362,17689,18511,
#Partially deleted in new
chr17	50719597	50741149	chr17:50719597-50741149	0	+	50719732	50737360	789624	5	234,67,193,40,48,	0,17362,17689,20708,21504,
#Partially deleted in new
chr17	50719598	50751617	chr17:50719598-50751617	1	+	50719732	50750937	789624	11	233,67,40,145,75,105,162,284,161,141,871,	0,17361,20707,21503,22058,24107,25053,26121,26943,30902,31148,
#Partially deleted in new
chr17	50719598	50743792	chr17:50719598-50743792	0	+	50719732	50737360	789624	7	233,67,193,40,145,75,87,	0,17361,17688,20707,21503,22058,24107,
#Partially deleted in new
chr17	50719602	50752709	chr17:50719602-50752709	1	+	50719732	50750661	789624	11	229,67,40,145,75,105,162,284,161,194,510,	0,17357,20703,21499,22054,24103,25049,26117,26939,30898,32597,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	50719628	50741712	chr17:50719628-50741712	0	+	50719732	50741712	789624	6	203,147,67,40,145,56,	0,4190,17331,20677,21473,22028,
#Partially deleted in new
chr17	50719628	50751004	chr17:50719628-50751004	0	+	50719732	50741127	789624	10	203,40,145,75,105,162,284,161,141,281,	0,20677,21473,22028,24077,25023,26091,26913,30872,31095,
#Partially deleted in new
chr17	50719646	50741232	chr17:50719646-50741232	0	+	50741123	50741232	789624	5	185,82,67,40,131,	0,3017,17313,20659,21455,
#Partially deleted in new
chr17	50719801	50743799	chr17:50719801-50743799	0	+	50719801	50738163	789624	7	30,67,59,40,145,75,94,	0,17158,18339,20504,21300,21855,23904,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	50722073	50724224	chr17:50722073-50724224	3	+	50722073	50722073	8553170	1	2151,	0,
#Partially deleted in new
chr17	50736634	50741673	chr17:50736634-50741673	0	+	50741123	50741673	789624	4	392,40,145,17,	0,3671,4467,5022,
#Partially deleted in new
chr17	50740266	50744808	chr17:50740266-50744808	0	+	50740266	50740266	8553170	5	79,145,75,105,157,	0,835,1390,3439,4385,
#Deleted in new
chr17	50743671	50744789	chr17:50743671-50744789	0	+	50743671	50743671	8553170	2	139,138,	0,980,
#Partially deleted in new
chr17	50744660	50750847	chr17:50744660-50750847	0	+	50744660	50749244	789624	5	153,284,161,126,347,	0,1059,1881,4558,5840,
#Partially deleted in new
chr17	50745905	50751013	chr17:50745905-50751013	0	+	50745905	50749288	789624	4	98,161,121,267,	0,636,3318,4841,
#Partially deleted in new
chr17	50746574	50751569	chr17:50746574-50751569	0	+	50746574	50751321	789624	3	128,106,273,	0,4172,4722,
#Partially deleted in new
chr17	50746613	50752282	chr17:50746613-50752282	0	+	50746613	50752233	789624	4	89,141,106,83,	0,3887,4133,5586,
#Partially deleted in new
chr17	50746618	50752585	chr17:50746618-50752585	0	+	50746618	50751321	789624	5	84,141,106,66,386,	0,3882,4128,4678,5581,
#Deleted in new
chr17	50751050	50752550	chr17:50751050-50752550	0	+	50751050	50751050	8553170	2	312,351,	0,1149,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	50761028	50767518	chr17:50761028-50767518	0	-	50761028	50761028	8553170	3	478,1640,645,	0,2368,5845,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	50761173	50767516	chr17:50761173-50767516	1	-	50761362	50766913	789624	4	333,161,138,54,	0,2223,5700,6289,
#Partially deleted in new
chr17	50761362	50766913	chr17:50761362-50766913	3	-	50761362	50766913	789624	4	144,161,84,40,	0,2034,2802,5511,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	50762850	50767557	chr17:50762850-50767557	1	-	50763375	50766913	789624	3	707,138,95,	0,4023,4612,
#Partially deleted in new
chr17	50764778	50767517	chr17:50764778-50767517	0	-	50764778	50764778	8553170	4	258,138,107,55,	0,2095,2437,2684,
#Partially deleted in new
chr17	50766558	50767518	chr17:50766558-50767518	0	-	50766558	50766558	8553170	1	960,	0,
#Partially deleted in new
chr17	50768649	50768730	chr17:50768649-50768730	3	+	50768649	50768649	5263520	1	81,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	50781305	50792493	chr17:50781305-50792493	3	+	50781305	50781305	8553170	2	302,1591,	0,9597,
#Deleted in new
chr17	50797365	50797651	chr17:50797365-50797651	7	-	50797365	50797365	16724991	1	286,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	50834649	50841308	chr17:50834649-50841308	1	+	50839567	50841019	789624	2	383,1810,	0,4849,
#Partially deleted in new
chr17	50835409	50842348	chr17:50835409-50842348	3	+	50835937	50841019	789624	2	738,2850,	0,4089,
#Deleted in new
chr17	50840056	50841626	chr17:50840056-50841626	3	-	50840056	50840056	8553170	2	302,155,	0,1415,
#Partially deleted in new
chr17	50847949	50849270	chr17:50847949-50849270	7	+	50847949	50847949	16724991	2	745,160,	0,1161,
#Deleted in new
chr17	50862222	50866345	chr17:50862222-50866345	1	-	50862979	50864017	0	2	1941,288,	0,3835,
#Deleted in new
chr17	50862979	50867978	chr17:50862979-50867978	3	-	50862979	50864017	0	3	1184,109,174,	0,4514,4825,
#Deleted in new
chr17	50863368	50866354	chr17:50863368-50866354	0	-	50863368	50863368	8553170	2	592,297,	0,2689,
#Deleted in new
chr17	50866678	50868307	chr17:50866678-50868307	1	+	50866678	50866678	789624	2	539,812,	0,817,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	50867147	50909737	chr17:50867147-50909737	3	+	50867147	50867147	8553170	5	70,91,121,242,166,	0,26620,41688,42008,42424,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	50908677	50909417	chr17:50908677-50909417	0	+	50908677	50908677	8553170	2	279,262,	0,478,
#Deleted in new
chr17	50909636	50910232	chr17:50909636-50910232	3	-	50909636	50909636	8553170	2	212,280,	0,316,
#Partially deleted in new
chr17	50934988	50944713	chr17:50934988-50944713	3	-	50934988	50934988	8553170	2	737,1317,	0,8408,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	50944103	50947827	chr17:50944103-50947827	1	+	50944103	50944103	8553170	2	97,430,	0,3294,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	50944113	50948750	chr17:50944113-50948750	3	+	50944113	50944113	8553170	2	87,702,	0,3935,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr17	50962173	51120865	chr17:50962173-51120865	1	-	50966271	51120656	0	30	4214,150,177,114,172,149,68,81,126,196,219,172,168,90,130,174,57,131,52,153,58,122,100,208,42,151,95,71,121,512,	0,8533,12597,14934,17572,20350,22749,23524,24938,27503,28276,31590,32883,33270,34391,36270,37487,39541,43038,43911,45095,52058,57985,58984,69507,79327,85201,94238,117410,158180,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr17	50962173	51120865	chr17:50962173-51120865	1	-	50966271	51120656	789624	29	4214,150,177,114,172,149,68,81,126,196,219,172,168,90,130,189,57,131,52,153,58,122,100,208,151,95,71,121,512,	0,8533,12597,14934,17572,20350,22749,23524,24938,27503,28276,31590,32883,33270,34391,36270,37487,39541,43038,43911,45095,52058,57985,58984,79327,85201,94238,117410,158180,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	50964148	50965494	chr17:50964148-50965494	0	-	50964148	50964148	8553170	2	246,435,	0,911,
#Partially deleted in new
chr17	50965074	51046878	chr17:50965074-51046878	1	-	50966271	51046660	0	27	1313,150,177,39,114,172,149,68,81,126,196,219,172,168,90,130,174,57,131,52,153,58,122,100,208,151,379,	0,5632,9696,10788,12033,14671,17449,19848,20623,22037,24602,25375,28689,29982,30369,31490,33369,34586,36640,40137,41010,42194,49157,55084,56083,76426,81425,
#Partially deleted in new
chr17	50965626	51120734	chr17:50965626-51120734	1	-	50966271	51120656	0	30	761,150,177,114,172,149,68,81,126,196,219,172,168,90,130,174,12,57,131,52,153,58,122,100,208,151,95,71,121,381,	0,5080,9144,11481,14119,16897,19296,20071,21485,24050,24823,28137,29430,29817,30938,32817,33849,34034,36088,39585,40458,41642,48605,54532,55531,75874,81748,90785,113957,154727,
#Partially deleted in new
chr17	50965643	51120865	chr17:50965643-51120865	3	-	50966271	51120656	0	29	744,150,177,114,172,149,68,81,126,196,219,172,168,90,130,174,57,131,52,153,58,122,100,208,151,95,71,121,512,	0,5063,9127,11464,14102,16880,19279,20054,21468,24033,24806,28120,29413,29800,30921,32800,34017,36071,39568,40441,41625,48588,54515,55514,75857,81731,90768,113940,154710,
#Partially deleted in new
chr17	50966299	50975360	chr17:50966299-50975360	0	-	50966299	50966299	8553170	3	88,150,590,	0,4407,8471,
#Partially deleted in new
chr17	50974869	50990585	chr17:50974869-50990585	0	-	50979916	50990585	789624	6	78,114,172,126,196,136,	0,2238,4876,12242,14807,15580,
#Partially deleted in new
chr17	50976599	50982672	chr17:50976599-50982672	0	-	50976599	50976599	8553170	3	622,172,149,	0,3146,5924,
#Partially deleted in new
chr17	50985698	50993937	chr17:50985698-50993937	0	-	50985698	50993937	789624	5	80,126,151,219,174,	0,1413,3978,4751,8065,
#Partially deleted in new
chr17	50989539	51079622	chr17:50989539-51079622	0	-	50989539	50989539	8553170	19	333,219,172,168,90,130,174,57,131,52,153,58,122,100,208,151,95,71,39,	0,910,4224,5517,5904,7025,8904,10121,12175,15672,16545,17729,24692,30619,31618,51961,57835,66872,90044,
#Partially deleted in new
chr17	50989638	51056424	chr17:50989638-51056424	0	-	50989638	50989638	8553170	19	234,219,172,168,90,130,174,57,131,52,153,58,122,100,208,42,151,95,13,	0,811,4125,5418,5805,6926,8805,10022,12076,15573,16446,17630,24593,30520,31519,42042,51862,57736,66773,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	50990022	50990742	chr17:50990022-50990742	0	-	50990022	50990022	8553170	2	142,416,	0,304,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	50993772	50995960	chr17:50993772-50995960	0	-	50993772	50993772	8553170	3	163,168,517,	0,1284,1671,
#Partially deleted in new
chr17	50996228	51001745	chr17:50996228-51001745	0	-	50996228	50996228	8553170	4	466,174,57,31,	0,2215,3432,5486,
#Partially deleted in new
chr17	50998412	51001744	chr17:50998412-51001744	0	-	50998412	50998412	8553170	3	205,57,30,	0,1248,3302,
#Partially deleted in new
chr17	51001834	51016256	chr17:51001834-51016256	0	-	51001834	51001834	8553170	7	11,52,153,58,122,200,31,	0,3377,4250,5434,12397,12619,14391,
#Partially deleted in new
chr17	51001836	51020259	chr17:51001836-51020259	0	-	51001836	51020259	789624	8	9,52,153,58,15,12,122,101,	0,3375,4248,5432,6000,7294,12395,18322,
#Partially deleted in new
chr17	51007268	51040451	chr17:51007268-51040451	0	-	51007268	51007268	8553170	6	58,122,100,208,42,24,	0,6963,12890,13889,24412,33159,
#Partially deleted in new
chr17	51021251	51046878	chr17:51021251-51046878	0	-	51021251	51046660	789624	4	114,42,151,379,	0,10429,20249,25248,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	51030913	51046837	chr17:51030913-51046837	0	-	51030913	51030913	8553170	3	809,151,338,	0,10587,15586,
#Partially deleted in new
chr17	51031442	51047471	chr17:51031442-51047471	0	-	51031442	51031442	8553170	3	280,151,97,	0,10058,15932,
#Partially deleted in new
chr17	51042523	51085471	chr17:51042523-51085471	3	+	51042523	51042523	8553170	3	32,125,175,	0,41602,42773,
#Partially deleted in new
chr17	51153535	51162195	chr17:51153535-51162195	3	+	51155654	51161845	0	5	127,130,102,113,468,	0,2115,6444,7624,8192,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	51153571	51156546	chr17:51153571-51156546	0	+	51153571	51153571	8553170	2	91,896,	0,2079,
#Partially deleted in new
chr17	51153575	51162061	chr17:51153575-51162061	1	+	51154373	51161845	0	6	87,220,130,102,113,334,	0,649,2075,6404,7584,8152,
#Partially deleted in new
chr17	51153577	51161586	chr17:51153577-51161586	1	+	51154373	51161276	789624	5	85,220,130,102,427,	0,647,2073,6402,7582,
#Partially deleted in new
chr17	51153579	51160602	chr17:51153579-51160602	0	+	51153579	51153579	8553170	4	83,220,130,623,	0,645,2071,6400,
#Partially deleted in new
chr17	51153580	51162428	chr17:51153580-51162428	1	+	51155654	51161118	789624	4	82,130,102,1331,	0,2070,6399,7517,
#Partially deleted in new
chr17	51153589	51171744	chr17:51153589-51171744	3	+	51155654	51171604	789624	8	73,130,102,113,130,102,113,258,	0,2061,6390,7570,13237,14652,16347,17897,
#Partially deleted in new
chr17	51153596	51162035	chr17:51153596-51162035	0	+	51155654	51161118	789624	5	66,130,102,175,308,	0,2054,6383,7501,8131,
#Partially deleted in new
chr17	51153603	51171744	chr17:51153603-51171744	1	+	51155654	51171507	789624	7	59,130,102,113,130,102,258,	0,2047,6376,7556,13223,14638,17883,
#Partially deleted in new
chr17	51153635	51171742	chr17:51153635-51171742	1	+	51154373	51171604	789624	9	27,220,130,102,113,130,102,113,256,	0,589,2015,6344,7524,13191,14606,16301,17851,
#Partially deleted in new
chr17	51153664	51161898	chr17:51153664-51161898	1	+	51154373	51161845	0	6	60,220,130,102,113,171,	0,560,1986,6315,7495,8063,
#Partially deleted in new
chr17	51154043	51155759	chr17:51154043-51155759	0	+	51154373	51155759	789624	2	401,109,	0,1607,
#Partially deleted in new
chr17	51154336	51156063	chr17:51154336-51156063	0	+	51154336	51154336	8553170	2	108,413,	0,1314,
#Partially deleted in new
chr17	51165434	51171744	chr17:51165434-51171744	3	+	51166830	51171604	0	5	247,130,102,113,258,	0,1392,2807,4502,6052,
#Partially deleted in new
chr17	51165814	51171743	chr17:51165814-51171743	1	+	51166830	51171604	0	5	90,130,102,113,257,	0,1012,2427,4122,5672,
#Partially deleted in new
chr17	51166277	51171747	chr17:51166277-51171747	1	+	51166830	51171604	0	5	220,130,102,113,261,	0,549,1964,3659,5209,
#Partially deleted in new
chr17	51166417	51171744	chr17:51166417-51171744	1	+	51166830	51171604	0	5	146,130,102,113,258,	0,409,1824,3519,5069,
#Partially deleted in new
chr17	51166419	51171744	chr17:51166419-51171744	1	+	51166830	51171507	789624	4	78,130,102,258,	0,407,1822,5067,
#Partially deleted in new
chr17	51166436	51167319	chr17:51166436-51167319	0	+	51166436	51166436	8553170	2	61,493,	0,390,
#Partially deleted in new
chr17	51166563	51171744	chr17:51166563-51171744	1	+	51166830	51171604	0	4	393,102,113,258,	0,1678,3373,4923,
#Partially deleted in new
chr17	51168018	51171613	chr17:51168018-51171613	0	+	51168018	51168018	8553170	3	325,113,127,	0,1918,3468,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	51169382	51171608	chr17:51169382-51171608	0	+	51169382	51169382	8553170	2	667,122,	0,2104,
#Partially deleted in new
chr17	51177424	51260066	chr17:51177424-51260066	3	-	51180575	51225161	0	17	3270,78,235,83,148,105,56,235,89,135,118,83,115,134,202,64,232,	0,14778,15357,16003,17789,24167,24597,25276,25715,26366,29463,39909,41505,42905,47583,81718,82410,
#Partially deleted in new
chr17	51177426	51225224	chr17:51177426-51225224	1	-	51180575	51225161	0	15	3268,78,235,83,148,105,56,235,89,135,118,83,115,134,217,	0,14776,15355,16001,17787,24165,24595,25274,25713,26364,29461,39907,41503,42903,47581,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	51183190	51186403	chr17:51183190-51186403	3	-	51183190	51183190	8553170	1	3213,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr17	51191583	51259941	chr17:51191583-51259941	0	-	51209406	51225161	0	16	1433,83,148,105,56,235,89,135,118,117,83,115,134,202,64,107,	0,1844,3630,10008,10438,11117,11556,12207,15304,17730,25750,27346,28746,33424,67559,68251,
#Deleted in new
chr17	51192105	51193016	chr17:51192105-51193016	0	-	51192746	51193016	789624	2	175,359,	0,552,
#Partially deleted in new
chr17	51192252	51260163	chr17:51192252-51260163	0	-	51192252	51192252	8553170	13	764,83,105,56,235,89,135,118,83,115,134,202,44,	0,1175,9339,9769,10448,10887,11538,14635,25081,26677,28077,32755,67867,
#Partially deleted in new
chr17	51192656	51209404	chr17:51192656-51209404	1	-	51192746	51206999	0	10	360,83,148,105,56,235,89,135,118,91,	0,771,2557,8935,9365,10044,10483,11134,14231,16657,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	51225182	51256829	chr17:51225182-51256829	0	-	51225182	51225182	8553170	2	27,523,	0,31124,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	51249578	51251748	chr17:51249578-51251748	3	-	51249578	51249578	8553170	1	2170,	0,
#Partially deleted in new
chr17	51260527	51297933	chr17:51260527-51297933	3	+	51260584	51296989	789624	14	399,113,99,68,89,126,175,101,91,124,175,143,39,152,	0,2746,5654,8309,12834,15338,16602,19477,19861,24717,27501,33375,36437,37254,
#Partially deleted in new
chr17	51275867	51288180	chr17:51275867-51288180	0	+	51275867	51280010	789624	5	124,101,91,124,152,	0,4137,4521,9377,12161,
#Partially deleted in new
chr17	51277162	51288077	chr17:51277162-51288077	0	+	51277162	51288034	789624	6	142,101,91,124,70,49,	0,2842,3226,8082,9320,10866,
#Partially deleted in new
chr17	51280015	51297878	chr17:51280015-51297878	0	+	51280015	51293949	789624	7	90,91,124,80,143,39,97,	0,373,5229,8108,13887,16949,17766,
#Partially deleted in new
chr17	51280449	51297936	chr17:51280449-51297936	0	+	51280449	51288589	789624	6	30,124,175,44,39,155,	0,4795,7579,8098,16515,17332,
#Partially deleted in new
chr17	51285267	51297930	chr17:51285267-51297930	0	+	51285267	51297814	789624	4	101,175,39,149,	0,2761,11697,12514,
#Deleted in new
chr17	51296254	51297929	chr17:51296254-51297929	0	+	51296254	51296254	8553170	2	749,148,	0,1527,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	51312608	51335165	chr17:51312608-51335165	3	-	51312608	51312608	789624	6	176,91,100,129,407,820,	0,8977,11024,20391,21103,21737,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	51332957	51334689	chr17:51332957-51334689	1	-	51332957	51332957	8553170	2	171,978,	0,754,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	51335260	51336240	chr17:51335260-51336240	3	+	51335260	51335260	8553170	2	406,179,	0,801,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	51336714	51342571	chr17:51336714-51342571	0	+	51336714	51336714	789624	3	1206,118,1321,	0,2892,4536,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	51336736	51445793	chr17:51336736-51445793	3	+	51336736	51336736	8553170	5	1184,118,433,196,2060,	0,2870,4514,103496,106997,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	51435426	51443802	chr17:51435426-51443802	0	+	51435426	51435426	8553170	3	270,196,69,	0,4806,8307,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	51439652	51445802	chr17:51439652-51445802	0	+	51439652	51439652	8553170	2	776,2069,	0,4081,
#Deleted in new
chr17	51502487	51503233	chr17:51502487-51503233	7	-	51502487	51502487	16724991	1	746,	0,
#Partially deleted in new
chr17	51630312	52160017	chr17:51630312-52160017	3	-	51631583	52157786	789624	10	1294,175,155,73,96,186,143,75,644,94,	0,3163,5542,18869,23328,117320,300677,442006,527413,529611,
#Partially deleted in new
chr17	51630312	52160002	chr17:51630312-52160002	1	-	51631583	51931043	789624	9	1294,175,155,73,96,186,143,75,79,	0,3163,5542,18869,23328,117320,300677,442006,529611,
#Partially deleted in new
chr17	51630319	52158063	chr17:51630319-52158063	0	-	52134981	52157786	789624	10	1287,175,155,73,96,186,143,75,171,338,	0,3156,5535,18862,23321,117313,300670,441999,504559,527406,
#Partially deleted in new
chr17	51630322	52158727	chr17:51630322-52158727	1	-	51631583	52157786	789624	9	1284,175,155,73,96,186,143,75,1002,	0,3153,5532,18859,23318,117310,300667,441996,527403,
#Partially deleted in new
chr17	51630768	52159801	chr17:51630768-52159801	1	-	51631583	52157786	789624	10	838,175,155,73,96,186,143,75,644,529,	0,2707,5086,18413,22872,116864,300221,441550,526957,528504,
#Partially deleted in new
chr17	51633611	52159983	chr17:51633611-52159983	0	-	51633611	52157786	789624	9	39,155,73,96,186,143,75,647,60,	0,2243,15570,20029,114021,297378,438707,524114,526312,
#Partially deleted in new
chr17	51635854	51748544	chr17:51635854-51748544	0	-	51635854	51635854	8553170	5	155,73,96,186,118,	0,13327,17786,111778,112572,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	51661592	51747788	chr17:51661592-51747788	0	-	51661831	51747788	789624	2	254,156,	0,86040,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	51761259	51763397	chr17:51761259-51763397	3	-	51761259	51761259	8553170	1	2138,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	51931063	52158063	chr17:51931063-52158063	0	-	51931063	51931063	8553170	4	69,85,75,338,	0,139375,141255,226662,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	52390514	52535701	chr17:52390514-52535701	3	+	52390514	52390514	8553170	4	76,63,92,77,	0,142017,144218,145110,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	52862120	52899588	chr17:52862120-52899588	3	+	52862120	52862120	789624	3	351,73,258,	0,36313,37210,
#Deleted in new
chr17	52985512	52987582	chr17:52985512-52987582	0	+	52985512	52985512	8553170	4	209,87,149,261,	0,927,1123,1809,
#Deleted in new
chr17	52985519	52987652	chr17:52985519-52987652	3	+	52985519	52985519	8553170	4	202,87,149,397,	0,920,1116,1736,
#Deleted in new
chr17	53105733	53106358	chr17:53105733-53106358	7	+	53105733	53105733	16724991	1	625,	0,
#Partially deleted in new
chr17	53353426	53354134	chr17:53353426-53354134	7	-	53353426	53353426	16724991	1	708,	0,
#Partially deleted in new
chr17	53434130	53435829	chr17:53434130-53435829	7	+	53434130	53434130	16724991	3	200,777,206,	0,425,1493,
#Partially deleted in new
chr17	53438555	53439721	chr17:53438555-53439721	7	+	53438555	53438555	16724991	2	103,665,	0,501,
#Partially deleted in new
chr17	53681629	53682111	chr17:53681629-53682111	7	-	53681629	53681629	16724991	1	482,	0,
#Partially deleted in new
chr17	53756988	53757870	chr17:53756988-53757870	7	-	53756988	53756988	16724991	1	882,	0,
#Deleted in new
chr17	53822900	53825213	chr17:53822900-53825213	3	+	53823033	53825055	789624	1	2313,	0,
#Partially deleted in new
chr17	53952935	53955324	chr17:53952935-53955324	7	+	53952935	53952935	16724991	1	2389,	0,
#Deleted in new
chr17	54477795	54478168	chr17:54477795-54478168	7	+	54477795	54477795	16724991	1	373,	0,
#Partially deleted in new
chr17	54702935	54703430	chr17:54702935-54703430	7	+	54702935	54702935	16724991	1	495,	0,
#Deleted in new
chr17	54754164	54754649	chr17:54754164-54754649	7	-	54754164	54754164	16724991	1	485,	0,
#Deleted in new
chr17	54770948	54771277	chr17:54770948-54771277	3	+	54770948	54770948	8553170	1	329,	0,
#Partially deleted in new
chr17	54899386	54937316	chr17:54899386-54937316	1	+	54900865	54937234	0	11	847,530,85,79,150,126,105,117,134,61,208,	0,1007,4321,6102,13279,14361,15252,16359,30686,37262,37722,
#Partially deleted in new
chr17	54899801	54900509	chr17:54899801-54900509	0	+	54899801	54899801	8553170	2	443,116,	0,592,
#Partially deleted in new
chr17	54900512	54961956	chr17:54900512-54961956	3	+	54900865	54960626	0	16	411,85,79,150,126,105,117,134,61,118,97,52,106,82,62,722,	0,3195,4976,12153,13235,14126,15233,29560,36136,36596,38411,46748,49005,49532,60053,60722,
#Partially deleted in new
chr17	54900721	54930206	chr17:54900721-54930206	0	+	54900865	54903738	789624	8	202,113,79,150,126,105,117,134,	0,2958,4767,11944,13026,13917,15024,29351,
#Partially deleted in new
chr17	54900751	54961949	chr17:54900751-54961949	1	+	54900865	54960626	789624	16	172,85,79,150,126,105,117,134,61,118,97,52,73,82,62,715,	0,2956,4737,11914,12996,13887,14994,29321,35897,36357,38172,46509,48799,49293,59814,60483,
#Partially deleted in new
chr17	54900805	54961722	chr17:54900805-54961722	1	+	54912674	54960626	0	15	118,79,150,126,105,117,134,61,118,97,52,106,82,62,488,	0,4683,11860,12942,13833,14940,29267,35843,36303,38118,46455,48712,49239,59760,60429,
#Partially deleted in new
chr17	54900833	54917452	chr17:54900833-54917452	1	+	54903754	54915925	789624	7	90,80,79,150,126,105,1707,	0,2879,4655,11832,12914,13805,14912,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	54900833	54947311	chr17:54900833-54947311	0	+	54912674	54942370	789624	11	90,150,126,105,117,134,61,118,97,203,51,	0,11832,12914,13805,14912,29239,35815,36275,38090,41455,46427,
#Partially deleted in new
chr17	54900835	54961314	chr17:54900835-54961314	1	+	54900865	54960626	789624	16	88,85,79,129,126,105,117,134,61,118,97,52,106,82,62,80,	0,2872,4653,11851,12912,13803,14910,29237,35813,36273,38088,46425,48682,49209,59730,60399,
#Partially deleted in new
chr17	54900852	54961475	chr17:54900852-54961475	1	+	54912674	54960626	0	14	71,150,126,105,117,134,61,118,97,52,106,82,62,241,	0,11813,12895,13786,14893,29220,35796,36256,38071,46408,48665,49192,59713,60382,
#Partially deleted in new
chr17	54900852	54961497	chr17:54900852-54961497	0	+	54900865	54912714	789624	14	71,85,150,126,117,134,61,118,97,52,106,82,62,263,	0,2855,11813,12895,14893,29220,35796,36256,38071,46408,48665,49192,59713,60382,
#Partially deleted in new
chr17	54900852	54914691	chr17:54900852-54914691	0	+	54912674	54914691	789624	7	71,80,79,8,150,126,53,	0,2860,4636,5926,11813,12895,13786,
#Partially deleted in new
chr17	54900856	54938033	chr17:54900856-54938033	1	+	54900865	54937234	0	10	67,85,79,150,126,105,117,134,61,925,	0,2851,4632,11809,12891,13782,14889,29216,35792,36252,
#Partially deleted in new
chr17	54900862	54914705	chr17:54900862-54914705	0	+	54900865	54912714	789624	7	61,85,79,8,150,126,67,	0,2845,4626,5916,11803,12885,13776,
#Partially deleted in new
chr17	54900869	54915847	chr17:54900869-54915847	0	+	54900869	54915847	789624	6	54,85,79,150,126,102,	0,2838,4619,11796,12878,14876,
#Partially deleted in new
chr17	54900876	54936709	chr17:54900876-54936709	0	+	54900876	54936709	789624	8	47,85,79,126,105,117,134,61,	0,2831,4612,12871,13762,14869,29196,35772,
#Partially deleted in new
chr17	54901102	54913846	chr17:54901102-54913846	0	+	54903754	54913846	789624	5	143,85,79,150,99,	0,2605,4386,11563,12645,
#Partially deleted in new
chr17	54901133	54915860	chr17:54901133-54915860	0	+	54901153	54915860	789624	7	48,85,79,150,126,105,115,	0,2574,4355,11532,12614,13505,14612,
#Partially deleted in new
chr17	54913818	54930379	chr17:54913818-54930379	0	+	54913818	54913818	8553170	4	55,105,117,307,	0,820,1927,16254,
#Deleted in new
chr17	54936412	54937484	chr17:54936412-54937484	0	+	54936412	54936412	8553170	2	297,376,	0,696,
#Partially deleted in new
chr17	54938576	54947353	chr17:54938576-54947353	0	+	54938576	54938576	8553170	2	444,93,	0,8684,
#Partially deleted in new
chr17	54938780	54961413	chr17:54938780-54961413	0	+	54938780	54938780	8553170	6	240,52,106,82,62,179,	0,8480,10737,11264,21785,22454,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	54938923	54959494	chr17:54938923-54959494	0	+	54938923	54959319	789624	5	97,52,106,82,215,	0,8337,10594,11121,20356,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	54951901	54968653	chr17:54951901-54968653	0	-	54962732	54968646	789624	5	211,1797,126,156,373,	0,9217,11404,12795,16379,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	54951905	54955149	chr17:54951905-54955149	0	-	54951905	54951905	8553170	1	3244,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	54951905	54961265	chr17:54951905-54961265	0	-	54951905	54951905	8553170	3	207,99,147,	0,1755,9213,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	54951905	54954105	chr17:54951905-54954105	0	-	54951905	54951905	8553170	2	207,445,	0,1755,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	54951908	54968654	chr17:54951908-54968654	0	-	54961264	54968646	789624	5	204,194,126,156,374,	0,9210,11397,12788,16372,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	54951934	54963414	chr17:54951934-54963414	0	-	54961281	54963414	789624	3	178,208,109,	0,9184,11371,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	54956759	54958426	chr17:54956759-54958426	3	-	54956759	54956759	8553170	1	1667,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	54959200	54961139	chr17:54959200-54961139	0	-	54959200	54959200	8553170	2	266,21,	0,1918,
#Partially deleted in new
chr17	54961205	54968785	chr17:54961205-54968785	3	-	54962732	54968646	789624	4	1710,126,156,505,	0,2100,3491,7075,
#Partially deleted in new
chr17	54961264	54968646	chr17:54961264-54968646	1	-	54961264	54968646	789624	4	48,126,156,366,	0,2041,3432,7016,
#Partially deleted in new
chr17	54962902	54968703	chr17:54962902-54968703	1	-	54963260	54968646	789624	3	529,156,423,	0,1794,5378,
#Deleted in new
chr17	54964473	54964679	chr17:54964473-54964679	3	+	54964473	54964473	8553170	1	206,	0,
#Partially deleted in new
chr17	54968726	54990988	chr17:54968726-54990988	0	+	54968726	54968726	8553170	4	89,78,125,164,	0,16887,17415,22098,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr17	54968764	55173632	chr17:54968764-55173632	3	+	54986219	55159911	0	18	51,78,125,133,107,211,76,92,97,92,90,66,177,117,50,134,58,13836,	0,16849,17377,22060,30580,30867,32043,38741,62403,65403,74471,78324,104135,109313,109921,112285,172545,191032,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	54968774	55044776	chr17:54968774-55044776	1	+	54986219	55043629	789624	11	41,125,133,107,211,76,92,97,92,90,1165,	0,17367,22050,30570,30857,32033,38731,62393,65393,74461,74837,
#Partially deleted in new
chr17	54968775	55160926	chr17:54968775-55160926	1	+	54986219	55159911	789624	17	40,78,125,133,107,211,76,92,97,92,90,177,117,50,134,58,1130,	0,16838,17366,22049,30569,30856,32032,38730,62392,65392,74460,104124,109302,109910,112274,172534,191021,
#Partially deleted in new
chr17	54968791	54991852	chr17:54968791-54991852	0	+	54968791	54968791	8553170	5	24,78,125,133,814,	0,16822,17350,22033,22247,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	54968794	55044776	chr17:54968794-55044776	1	+	54999395	55043629	0	11	21,78,125,107,217,76,92,97,92,90,1165,	0,16819,17347,30550,30831,32013,38711,62373,65373,74441,74817,
#Partially deleted in new
chr17	54999815	55043366	chr17:54999815-55043366	0	+	54999815	55034213	789624	5	27,76,97,92,131,	0,992,31352,34352,43420,
#Partially deleted in new
chr17	55030806	55043375	chr17:55030806-55043375	0	+	55030806	55030806	8553170	3	458,92,140,	0,3361,12429,
#Partially deleted in new
chr17	55265011	55325065	chr17:55265011-55325065	3	+	55265484	55320879	789624	4	588,336,221,4402,	0,2739,50215,55652,
#Partially deleted in new
chr17	55265809	55321414	chr17:55265809-55321414	1	+	55267890	55320879	789624	4	77,336,221,751,	0,1941,49417,54854,
#Partially deleted in new
chr17	55266221	55322989	chr17:55266221-55322989	1	+	55267890	55320879	789624	4	94,336,221,2326,	0,1529,49005,54442,
#Partially deleted in new
chr17	55267590	55323535	chr17:55267590-55323535	1	+	55267890	55320879	789624	3	496,221,2872,	0,47636,53073,
#Partially deleted in new
chr17	55267614	55321285	chr17:55267614-55321285	0	+	55267890	55315269	789624	3	472,216,622,	0,47617,53049,
#Partially deleted in new
chr17	55267815	55321419	chr17:55267815-55321419	0	+	55267815	55320879	789624	3	271,221,759,	0,47411,52845,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	55271503	55273653	chr17:55271503-55273653	3	-	55271503	55271503	8553170	2	1596,144,	0,2006,
#Partially deleted in new
chr17	55283481	55315424	chr17:55283481-55315424	0	+	55283481	55283481	8553170	2	216,198,	0,31745,
#Partially deleted in new
chr17	55283495	55288930	chr17:55283495-55288930	0	+	55283495	55283495	8553170	3	202,46,50,	0,516,5385,
#Partially deleted in new
chr17	55283699	55320857	chr17:55283699-55320857	0	+	55283699	55283699	8553170	3	78,221,194,	0,31527,36964,
#Partially deleted in new
chr17	55283719	55315447	chr17:55283719-55315447	0	+	55283719	55283719	8553170	3	234,103,221,	0,5161,31507,
#Deleted in new
chr17	55318952	55321143	chr17:55318952-55321143	0	+	55318952	55318952	8553170	2	102,480,	0,1711,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	55325756	55327791	chr17:55325756-55327791	3	-	55325756	55325756	8553170	2	1547,216,	0,1819,
#Partially deleted in new
chr17	55392612	55421992	chr17:55392612-55421992	3	-	55394333	55421695	789624	7	1922,70,102,75,161,82,323,	0,8856,11154,15133,18644,21538,29057,
#Partially deleted in new
chr17	55392642	55421835	chr17:55392642-55421835	1	-	55394333	55421695	8553170	8	1892,70,102,93,75,161,82,166,	0,8826,11124,11812,15103,18614,21508,29027,
#Partially deleted in new
chr17	55401468	55421924	chr17:55401468-55421924	0	-	55401468	55421695	789624	5	70,102,161,82,255,	0,2298,9788,12682,20201,
#Deleted in new
chr17	55420091	55421797	chr17:55420091-55421797	0	-	55420091	55420091	8553170	2	442,128,	0,1578,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	55448432	55511444	chr17:55448432-55511444	3	-	55511052	55511334	789624	5	1866,184,52,121,566,	0,18712,30329,31027,62446,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	55454045	55458450	chr17:55454045-55458450	0	-	55454045	55454045	8553170	2	37,226,	0,4179,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	55468065	55510938	chr17:55468065-55510938	0	-	55468065	55468065	8553170	4	336,118,52,60,	0,8989,10696,42813,
#Partially deleted in new
chr17	55526963	55561091	chr17:55526963-55561091	7	-	55526963	55526963	16724991	4	220,74,161,135,	0,751,958,33993,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	55550930	55551649	chr17:55550930-55551649	7	-	55550930	55550930	16724991	1	719,	0,
#Deleted in new
chr17	55551809	55551920	chr17:55551809-55551920	3	+	55551809	55551809	8553170	1	111,	0,
#Deleted in new
chr17	55560908	55561577	chr17:55560908-55561577	5	-	55560908	55560908	16724991	1	669,	0,
#Deleted in new
chr17	55719626	55722856	chr17:55719626-55722856	1	-	55720665	55721070	789624	2	1509,238,	0,2992,
#Partially deleted in new
chr17	55719917	55732121	chr17:55719917-55732121	3	-	55720665	55721070	789624	4	1218,111,182,451,	0,2701,7883,11753,
#Deleted in new
chr17	55720682	55721798	chr17:55720682-55721798	0	-	55720682	55721070	789624	2	453,267,	0,849,
#Deleted in new
chr17	55721462	55723024	chr17:55721462-55723024	0	-	55721462	55721462	8553170	3	356,111,99,	0,1156,1463,
#Deleted in new
chr17	55721500	55722864	chr17:55721500-55722864	0	-	55721500	55721500	8553170	2	318,252,	0,1112,
#Partially deleted in new
chr17	55722555	55731884	chr17:55722555-55731884	0	-	55722555	55722555	8553170	3	174,182,214,	0,5245,9115,
#Partially deleted in new
chr17	55750978	55777374	chr17:55750978-55777374	3	+	55751103	55776100	0	6	266,118,80,172,68,1340,	0,16356,20127,22745,23813,25056,
#Partially deleted in new
chr17	55751060	55777368	chr17:55751060-55777368	1	+	55751103	55775343	789624	6	184,118,80,172,68,2058,	0,16274,20045,22663,23731,24250,
#Partially deleted in new
chr17	55751093	55823090	chr17:55751093-55823090	1	+	55751103	55822841	789624	6	151,118,80,172,68,330,	0,16241,20012,22630,23698,71667,
#Partially deleted in new
chr17	55751104	55777373	chr17:55751104-55777373	0	+	55767409	55773711	789624	6	373,118,96,240,68,1339,	0,16230,20001,22551,23687,24930,
#Partially deleted in new
chr17	55751399	55777374	chr17:55751399-55777374	1	+	55767409	55776100	0	6	78,118,80,172,68,1340,	0,15935,19706,22324,23392,24635,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	55768846	55777387	chr17:55768846-55777387	0	+	55768846	55768846	8553170	4	2339,172,68,1353,	0,4877,5945,7188,
#Partially deleted in new
chr17	55842676	55872939	chr17:55842676-55872939	3	-	55842676	55842676	8553170	3	196,256,133,	0,14341,30130,
#Partially deleted in new
chr17	56110957	56228550	chr17:56110957-56228550	0	+	56110957	56110957	8553170	2	89,634,	0,116959,
#Partially deleted in new
chr17	56153470	56227957	chr17:56153470-56227957	0	+	56153470	56153470	8553170	10	136,33,68,73,69,93,44,35,312,41,	0,3073,31278,31435,41843,53015,53454,62323,71168,74446,
#Partially deleted in new
chr17	56153474	56482646	chr17:56153474-56482646	3	+	56153509	56482547	789624	17	56,41,135,202,211,195,114,98,91,108,100,133,117,216,167,151,291,	0,74442,172746,197291,200361,219171,221126,286852,289368,295604,303386,303782,304388,312881,324013,327193,328881,
#Partially deleted in new
chr17	56153509	56511659	chr17:56153509-56511659	1	+	56153509	56511269	789624	20	21,41,135,202,211,195,114,98,91,108,100,133,117,216,167,151,169,167,217,1187,	0,74407,172711,197256,200326,219136,221091,286817,289333,295569,303351,303747,304353,312846,323978,327158,328846,338677,345372,356963,
#Partially deleted in new
chr17	56174174	56353895	chr17:56174174-56353895	0	+	56174320	56353895	789624	5	227,41,135,202,60,	0,53742,152046,176591,179661,
#Partially deleted in new
chr17	56227916	56258359	chr17:56227916-56258359	0	+	56227916	56227916	8553170	5	41,110,87,105,424,	0,17788,24305,26199,30019,
#Partially deleted in new
chr17	56323222	56326333	chr17:56323222-56326333	0	+	56323222	56323222	8553170	2	320,113,	0,2998,
#Deleted in new
chr17	56368062	56368215	chr17:56368062-56368215	7	+	56368062	56368062	16724991	1	153,	0,
#Partially deleted in new
chr17	56456946	56463906	chr17:56456946-56463906	0	+	56456946	56456946	8553170	5	14,133,117,81,83,	0,310,916,5157,6877,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	56471141	56473647	chr17:56471141-56473647	3	+	56471141	56471141	8553170	1	2506,	0,
#Deleted in new
chr17	56573039	56573195	chr17:56573039-56573195	7	+	56573039	56573039	16724991	1	156,	0,
#Deleted in new
chr17	56593698	56595590	chr17:56593698-56595590	3	+	56594223	56594922	0	1	1892,	0,
#Partially deleted in new
chr17	56791912	56833896	chr17:56791912-56833896	3	-	56795063	56815810	789624	8	440,137,101,255,115,241,445,279,	0,3131,22956,23843,32826,33168,40985,41705,
#Partially deleted in new
chr17	56791912	56795292	chr17:56791912-56795292	0	-	56791912	56791912	8553170	2	440,249,	0,3131,
#Deleted in new
chr17	56803840	56804269	chr17:56803840-56804269	3	-	56803840	56803840	8553170	1	429,	0,
#Partially deleted in new
chr17	56824746	56838773	chr17:56824746-56838773	0	-	56824746	56824746	8553170	3	107,241,285,	0,334,13742,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	56834098	56869567	chr17:56834098-56869567	3	+	56834795	56862791	789624	12	162,482,160,120,144,158,52,114,72,128,112,6956,	0,679,9920,11591,13823,14597,15082,22413,24495,27692,28041,28513,
#Deleted in new
chr17	56834106	56836466	chr17:56834106-56836466	1	+	56834795	56835329	789624	2	154,1689,	0,671,
#Partially deleted in new
chr17	56834965	56866076	chr17:56834965-56866076	0	+	56834965	56862266	789624	10	294,160,120,144,158,52,114,72,128,3937,	0,9053,10724,12956,13730,14215,21546,23628,26825,27174,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	56836386	56914080	chr17:56836386-56914080	0	-	56855102	56913988	8553170	13	2234,100,138,130,191,99,84,27,66,160,234,96,689,	0,6631,7266,15556,18533,58956,59134,59539,62728,65032,67868,72081,77005,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	56844018	56846302	chr17:56844018-56846302	0	+	56844018	56844018	8553170	2	160,613,	0,1671,
#Deleted in new
chr17	56862185	56863289	chr17:56862185-56863289	0	+	56862185	56862791	789624	2	66,645,	0,459,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	56871169	56871276	chr17:56871169-56871276	3	+	56871169	56871169	8553170	1	107,	0,
#Deleted in new
chr17	56884638	56884819	chr17:56884638-56884819	7	-	56884638	56884638	16724991	1	181,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	56887908	56914038	chr17:56887908-56914038	3	-	56891699	56913988	0	9	4321,99,84,27,66,160,234,96,647,	0,7434,7612,8017,11206,13510,16346,20559,25483,
#Deleted in new
chr17	56888879	56891841	chr17:56888879-56891841	3	+	56888879	56888879	8553170	2	78,460,	0,2502,
#Deleted in new
chr17	56890520	56891526	chr17:56890520-56891526	0	-	56890520	56890520	8553170	2	780,172,	0,834,
#Partially deleted in new
chr17	56890667	56914032	chr17:56890667-56914032	1	-	56891699	56913988	0	10	633,866,99,84,27,66,160,234,96,641,	0,696,4675,4853,5258,8447,10751,13587,17800,22724,
#Deleted in new
chr17	56891269	56891355	chr17:56891269-56891355	3	-	56891269	56891269	5263520	1	86,	0,
#Partially deleted in new
chr17	56891582	56913472	chr17:56891582-56913472	0	-	56912114	56913472	789624	10	647,99,84,27,66,160,234,96,61,81,	0,3760,3938,4343,7532,9836,12672,16885,20522,21809,
#Partially deleted in new
chr17	56892111	56895774	chr17:56892111-56895774	0	-	56892111	56892111	8553170	3	118,99,254,	0,3231,3409,
#Partially deleted in new
chr17	56895769	56904343	chr17:56895769-56904343	0	-	56895769	56895769	8553170	4	183,66,160,89,	0,3345,5649,8485,
#Partially deleted in new
chr17	56898960	56904488	chr17:56898960-56904488	0	-	56898960	56898960	8553170	3	220,160,234,	0,2458,5294,
#Partially deleted in new
chr17	56901426	56908783	chr17:56901426-56908783	0	-	56901426	56901426	8553170	4	152,234,96,37,	0,2828,7041,7320,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	56908482	56913117	chr17:56908482-56913117	0	-	56908482	56908482	8553170	2	81,359,	0,4276,
#Deleted in new
chr17	56914185	56914533	chr17:56914185-56914533	3	+	56914185	56914185	8553170	1	348,	0,
#Partially deleted in new
chr17	56938186	56961054	chr17:56938186-56961054	3	-	56939070	56961019	789624	7	968,89,70,48,87,1108,280,	0,3848,8255,11200,11494,11702,22588,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	56939931	56941275	chr17:56939931-56941275	3	+	56939931	56939931	8553170	2	308,241,	0,1103,
#Partially deleted in new
chr17	56950912	56960776	chr17:56950912-56960776	0	-	56950912	56951450	789624	3	84,293,89,	0,509,9775,
#Partially deleted in new
chr17	56951663	56952404	chr17:56951663-56952404	7	+	56951663	56951663	16724991	2	116,294,	0,447,
#Partially deleted in new
chr17	56978104	57006763	chr17:56978104-57006763	3	+	56978159	57006235	789624	13	131,149,90,156,75,73,38,129,94,114,138,164,591,	0,2977,7273,9590,10111,12994,16876,17402,18857,20280,22750,23913,28068,
#Partially deleted in new
chr17	56978128	57006605	chr17:56978128-57006605	0	+	56978159	56985397	789624	13	107,114,90,156,75,73,38,129,94,114,138,164,433,	0,2988,7249,9566,10087,12970,16852,17378,18833,20256,22726,23889,28044,
#Partially deleted in new
chr17	56978130	56994975	chr17:56978130-56994975	0	+	56978130	56978130	8553170	7	105,149,90,156,75,73,71,	0,2951,7247,9564,10085,12968,16774,
#Partially deleted in new
chr17	56978130	56996996	chr17:56978130-56996996	0	+	56978159	56995564	789624	7	105,149,50,73,38,129,35,	0,2951,7247,12968,16850,17376,18831,
#Partially deleted in new
chr17	56978133	56991171	chr17:56978133-56991171	0	+	56978159	56991171	789624	5	102,149,156,75,73,	0,2948,9561,10082,12965,
#Partially deleted in new
chr17	56978133	56995544	chr17:56978133-56995544	0	+	56987787	56995544	789624	7	102,90,156,75,73,38,38,	0,7244,9561,10082,12965,16847,17373,
#Partially deleted in new
chr17	56978136	56987845	chr17:56978136-56987845	0	+	56978136	56978136	8553170	5	99,149,90,92,151,	0,2945,7241,9104,9558,
#Partially deleted in new
chr17	56978147	57006768	chr17:56978147-57006768	0	+	56978159	56998384	789624	13	88,149,90,156,75,73,38,129,94,125,138,164,596,	0,2934,7230,9547,10068,12951,16833,17359,18814,20226,22707,23870,28025,
#Partially deleted in new
chr17	56978152	56995504	chr17:56978152-56995504	0	+	56978152	56978152	8553170	8	83,149,90,156,75,73,38,58,	0,2929,7225,9542,10063,12946,16828,17294,
#Partially deleted in new
chr17	56978159	56995564	chr17:56978159-56995564	1	+	56978159	56995564	789624	6	76,149,50,73,38,58,	0,2922,7218,12939,16821,17347,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	56982748	56985104	chr17:56982748-56985104	3	+	56982748	56982748	8553170	1	2356,	0,
#Partially deleted in new
chr17	56987089	56997102	chr17:56987089-56997102	0	+	56987089	56987089	8553170	5	761,75,73,731,141,	0,1126,4009,7815,9872,
#Partially deleted in new
chr17	56987561	56997135	chr17:56987561-56997135	0	+	56987561	56987561	8553170	6	289,75,73,38,129,174,	0,654,3537,7419,7945,9400,
#Partially deleted in new
chr17	56987751	56995875	chr17:56987751-56995875	0	+	56987751	56987751	8553170	5	99,75,73,38,369,	0,464,3347,7229,7755,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	56995559	56998325	chr17:56995559-56998325	0	+	56995559	56995559	8553170	3	76,94,358,	0,1402,2408,
#Partially deleted in new
chr17	56997013	57006758	chr17:56997013-57006758	0	+	56997013	57006235	789624	4	42,138,164,586,	0,3841,5004,9159,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	56998290	57006586	chr17:56998290-57006586	0	+	56998290	56998290	8553170	4	208,138,164,414,	0,2564,3727,7882,
#Partially deleted in new
chr17	57045477	57046797	chr17:57045477-57046797	7	+	57045477	57045477	16724991	1	1320,	0,
#Partially deleted in new
chr17	57045520	57046445	chr17:57045520-57046445	5	+	57045520	57045520	16724991	1	925,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	57078297	57085022	chr17:57078297-57085022	3	-	57078297	57078297	8553170	3	406,124,183,	0,989,6542,
#Partially deleted in new
chr17	57079146	57085024	chr17:57079146-57085024	0	-	57079146	57079146	8553170	2	264,185,	0,5693,
#Partially deleted in new
chr17	57085091	57106023	chr17:57085091-57106023	0	+	57105464	57106023	789624	2	67,583,	0,20349,
#Partially deleted in new
chr17	57085189	57121349	chr17:57085189-57121349	3	+	57105464	57120324	789624	11	209,1738,134,127,128,178,151,68,74,63,1100,	0,20251,24835,26608,27301,29269,30921,31670,33191,33792,35060,
#Partially deleted in new
chr17	57085713	57120375	chr17:57085713-57120375	1	+	57105464	57120324	789624	12	153,165,1738,134,127,128,178,151,68,74,63,126,	0,659,19727,24311,26084,26777,28745,30397,31146,32667,33268,34536,
#Partially deleted in new
chr17	57085716	57105485	chr17:57085716-57105485	0	+	57105464	57105485	789624	3	358,165,45,	0,656,19724,
#Partially deleted in new
chr17	57085716	57105487	chr17:57085716-57105487	0	+	57105464	57105487	789624	3	358,173,47,	0,10874,19724,
#Partially deleted in new
chr17	57085716	57121342	chr17:57085716-57121342	1	+	57105464	57120324	789624	12	358,173,1738,134,127,128,178,151,68,74,63,1093,	0,10874,19724,24308,26081,26774,28742,30394,31143,32664,33265,34533,
#Partially deleted in new
chr17	57085755	57105605	chr17:57085755-57105605	0	+	57105464	57105605	789624	2	319,165,	0,19685,
#Partially deleted in new
chr17	57085773	57105876	chr17:57085773-57105876	0	+	57105464	57105876	789624	2	96,436,	0,19667,
#Partially deleted in new
chr17	57086258	57105749	chr17:57086258-57105749	0	+	57105464	57105749	789624	2	279,309,	0,19182,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	57092144	57096425	chr17:57092144-57096425	3	-	57092144	57092144	8553170	1	4281,	0,
#Partially deleted in new
chr17	57095843	57120570	chr17:57095843-57120570	1	+	57105464	57120324	789624	11	116,1738,134,127,128,178,151,68,74,63,321,	0,9597,14181,15954,16647,18615,20267,21016,22537,23138,24406,
#Partially deleted in new
chr17	57096535	57121346	chr17:57096535-57121346	0	+	57105464	57108013	789624	12	228,1738,103,134,127,128,178,151,68,74,63,1097,	0,8905,11410,13489,15262,15955,17923,19575,20324,21845,22446,23714,
#Partially deleted in new
chr17	57096577	57120555	chr17:57096577-57120555	1	+	57105464	57120324	789624	11	186,1738,134,127,128,178,151,68,74,63,306,	0,8863,13447,15220,15913,17881,19533,20282,21803,22404,23672,
#Partially deleted in new
chr17	57096608	57105713	chr17:57096608-57105713	0	+	57105464	57105713	789624	3	155,137,273,	0,4985,8832,
#Partially deleted in new
chr17	57096725	57114570	chr17:57096725-57114570	1	+	57105464	57108013	789624	7	38,1738,103,134,127,128,112,	0,8715,11220,13299,15072,15765,17733,
#Partially deleted in new
chr17	57098436	57106012	chr17:57098436-57106012	0	+	57105464	57106012	789624	2	138,572,	0,7004,
#Partially deleted in new
chr17	57106022	57111835	chr17:57106022-57111835	0	+	57106022	57111835	789624	4	388,54,134,38,	0,1102,4002,5775,
#Partially deleted in new
chr17	57106718	57120597	chr17:57106718-57120597	0	+	57106718	57116915	789624	9	460,134,127,128,178,68,74,63,348,	0,3306,5079,5772,7740,10141,11662,12263,13531,
#Partially deleted in new
chr17	57114488	57121344	chr17:57114488-57121344	0	+	57114488	57121314	789624	6	148,151,68,74,63,66,	0,1622,2371,3892,4493,6790,
#Partially deleted in new
chr17	57116132	57121342	chr17:57116132-57121342	0	+	57116132	57121318	789624	6	129,68,74,63,44,64,	0,727,2248,2849,4117,5146,
#Partially deleted in new
chr17	57255850	57680121	chr17:57255850-57680121	1	+	57257101	57677028	789624	14	131,41,82,85,42,93,49,83,115,75,63,209,73,573,	0,1247,1615,2419,6300,145528,273825,341017,360119,371378,396248,419067,421136,423698,
#Partially deleted in new
chr17	57256533	57684685	chr17:57256533-57684685	3	+	57256742	57677028	789624	14	271,41,82,85,42,93,49,83,115,75,63,155,73,5137,	0,564,932,1736,5617,144845,273142,340334,359436,370695,395565,418438,420453,423015,
#Partially deleted in new
chr17	57256739	57365021	chr17:57256739-57365021	0	+	57256742	57260006	789624	7	65,41,82,85,78,42,100,	0,358,726,1530,3237,5411,108182,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	57256742	57274489	chr17:57256742-57274489	0	+	57256742	57256742	8553170	6	62,41,82,85,42,222,	0,355,723,1527,5408,17525,
#Partially deleted in new
chr17	57256773	57565995	chr17:57256773-57565995	0	+	57256773	57256773	8553170	8	31,41,82,85,42,93,49,73,	0,324,692,1496,5377,144605,272902,309149,
#Partially deleted in new
chr17	57257012	57632900	chr17:57257012-57632900	1	+	57257047	57631831	789624	10	126,82,85,42,93,49,83,115,75,1110,	0,453,1257,5138,144366,272663,339855,358957,370216,374778,
#Partially deleted in new
chr17	57257017	57432614	chr17:57257017-57432614	0	+	57257047	57432614	789624	6	121,82,85,42,93,29,	0,448,1252,5133,144361,175568,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	57257041	57274433	chr17:57257041-57274433	0	+	57257041	57257041	8553170	5	97,82,85,42,166,	0,424,1228,5109,17226,
#Deleted in new
chr17	57257123	57262433	chr17:57257123-57262433	0	+	57257123	57257123	8553170	4	15,82,85,283,	0,342,1146,5027,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	57262114	57268550	chr17:57262114-57268550	0	+	57262114	57262114	8553170	2	78,5063,	0,1373,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	57277919	57280017	chr17:57277919-57280017	3	+	57277919	57277919	8553170	1	2098,	0,
#Partially deleted in new
chr17	57285843	57680297	chr17:57285843-57680297	1	+	57285883	57677028	789624	10	169,93,49,83,115,75,63,155,73,749,	0,115535,243832,311024,330126,341385,366255,389128,391143,393705,
#Partially deleted in new
chr17	57294684	57632905	chr17:57294684-57632905	1	+	57401378	57631831	789624	7	105,93,49,83,115,75,1115,	0,106694,234991,302183,321285,332544,337106,
#Partially deleted in new
chr17	57406811	57627302	chr17:57406811-57627302	0	+	57406811	57406811	8553170	4	228,83,115,74,	0,190056,209158,220417,
#Partially deleted in new
chr17	57440689	57675059	chr17:57440689-57675059	0	+	57440689	57440689	8553170	7	50,49,83,115,75,63,142,	0,88986,156178,175280,186539,211409,234228,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	57444486	57596950	chr17:57444486-57596950	0	+	57444486	57444486	8553170	3	266,49,83,	0,85189,152381,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	57448217	57450291	chr17:57448217-57450291	3	+	57448217	57448217	8553170	1	2074,	0,
#Partially deleted in new
chr17	57522247	57523597	chr17:57522247-57523597	3	-	57522247	57522247	789624	3	445,76,42,	0,583,1308,
#Deleted in new
chr17	57531768	57532355	chr17:57531768-57532355	3	+	57531768	57531768	8553170	1	587,	0,
#Partially deleted in new
chr17	57596902	57616631	chr17:57596902-57616631	0	+	57596902	57596902	8553170	2	48,662,	0,19067,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	57600855	57608412	chr17:57600855-57608412	3	-	57600855	57600855	789624	3	1153,106,153,	0,5397,7404,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	57618107	57618393	chr17:57618107-57618393	3	+	57618107	57618107	8553170	1	286,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	57625571	57633183	chr17:57625571-57633183	0	+	57625571	57625571	8553170	1	7612,	0,
#Partially deleted in new
chr17	57626914	57631949	chr17:57626914-57631949	0	+	57626914	57626914	8553170	2	389,159,	0,4876,
#Deleted in new
chr17	57671473	57675056	chr17:57671473-57675056	0	+	57671473	57671473	8553170	2	101,85,	0,3498,
#Deleted in new
chr17	57685528	57685592	chr17:57685528-57685592	3	-	57685528	57685528	8553170	1	64,	0,
#Deleted in new
chr17	57744480	57745312	chr17:57744480-57745312	3	-	57744810	57745272	789624	1	832,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	57771945	57834749	chr17:57771945-57834749	0	-	57771945	57771945	8553170	2	251,254,	0,62550,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	57771945	57834609	chr17:57771945-57834609	3	-	57771945	57771945	8553170	3	251,107,114,	0,60696,62550,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	57789448	57789732	chr17:57789448-57789732	3	+	57789448	57789448	8553170	1	284,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	57834780	57850056	chr17:57834780-57850056	3	-	57839782	57850010	0	5	5155,127,78,171,90,	0,6145,6402,14459,15186,
#Partially deleted in new
chr17	57840799	57850044	chr17:57840799-57850044	1	-	57840886	57850010	789624	4	253,78,171,78,	0,383,8440,9167,
#Partially deleted in new
chr17	57841003	57850056	chr17:57841003-57850056	0	-	57841003	57849297	789624	4	49,78,171,218,	0,179,8236,8835,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	57848735	57849997	chr17:57848735-57849997	0	-	57848735	57848735	8553170	2	675,31,	0,1231,
#Partially deleted in new
chr17	57861242	57955323	chr17:57861242-57955323	3	-	57866476	57885564	0	11	2043,71,59,94,72,84,193,127,128,651,99,	0,5231,6114,6907,7879,10043,11420,12348,18368,23986,93982,
#Partially deleted in new
chr17	57861603	57871365	chr17:57861603-57871365	0	-	57861603	57861603	8553170	5	1682,942,94,72,80,	0,4870,6546,7518,9682,
#Partially deleted in new
chr17	57862695	57892688	chr17:57862695-57892688	1	-	57866476	57885564	0	11	590,71,59,94,72,84,193,127,128,583,189,	0,3778,4661,5454,6426,8590,9967,10895,16915,22533,29804,
#Partially deleted in new
chr17	57862874	57867305	chr17:57862874-57867305	0	-	57862874	57862874	8553170	3	411,71,65,	0,3599,4366,
#Partially deleted in new
chr17	57862874	57868465	chr17:57862874-57868465	0	-	57862874	57862874	8553170	4	411,71,59,316,	0,3599,4482,5275,
#Partially deleted in new
chr17	57862874	57867630	chr17:57862874-57867630	0	-	57862874	57862874	8553170	3	411,71,274,	0,3599,4482,
#Partially deleted in new
chr17	57862962	57866857	chr17:57862962-57866857	0	-	57862962	57862962	8553170	2	323,384,	0,3511,
#Partially deleted in new
chr17	57862962	57869938	chr17:57862962-57869938	0	-	57862962	57862962	8553170	6	323,71,59,94,72,42,	0,3511,4394,5187,6159,6934,
#Partially deleted in new
chr17	57862962	57872670	chr17:57862962-57872670	0	-	57866476	57872670	789624	4	323,71,84,8,	0,3511,8323,9700,
#Partially deleted in new
chr17	57862975	57903389	chr17:57862975-57903389	1	-	57866476	57885564	0	11	310,71,59,94,72,84,193,127,128,651,404,	0,3498,4381,5174,6146,8310,9687,10615,16635,22253,40010,
#Partially deleted in new
chr17	57862975	57867415	chr17:57862975-57867415	0	-	57866476	57867415	789624	3	382,71,59,	0,3498,4381,
#Partially deleted in new
chr17	57863271	57955257	chr17:57863271-57955257	1	-	57866476	57879663	789624	10	14,71,59,94,72,84,193,127,128,33,	0,3202,4085,4878,5850,8014,9391,10319,16339,91953,
#Partially deleted in new
chr17	57872810	57885837	chr17:57872810-57885837	0	-	57872810	57885414	789624	5	45,127,128,213,192,	0,780,6800,12418,12835,
#Partially deleted in new
chr17	57912332	57922581	chr17:57912332-57922581	3	+	57912332	57912332	8553170	2	149,186,	0,10063,
#Partially deleted in new
chr17	57912363	57915139	chr17:57912363-57915139	1	+	57912363	57912363	8553170	2	118,124,	0,2652,
#Deleted in new
chr17	57955964	57956143	chr17:57955964-57956143	3	+	57955964	57955964	8553170	1	179,	0,
#Partially deleted in new
chr17	57971546	57982864	chr17:57971546-57982864	0	-	57974472	57982864	789624	5	3354,162,202,64,166,	0,7605,9056,10326,11152,
#Partially deleted in new
chr17	57973758	57988152	chr17:57973758-57988152	3	-	57974472	57988111	789624	6	1142,162,184,64,695,74,	0,5393,6844,8114,8940,14320,
#Partially deleted in new
chr17	57973758	57985348	chr17:57973758-57985348	1	-	57974472	57985259	789624	6	1142,162,184,64,695,95,	0,5393,6844,8114,8940,11495,
#Deleted in new
chr17	57982909	57988259	chr17:57982909-57988259	0	-	57982909	57982958	789624	3	484,160,181,	0,3075,5169,
#Deleted in new
chr17	57988179	57988760	chr17:57988179-57988760	3	+	57988179	57988179	8553170	1	581,	0,
#Partially deleted in new
chr17	57989037	58007246	chr17:57989037-58007246	3	-	58005746	58007137	789624	6	232,148,351,1051,185,303,	0,611,14613,15885,17305,17906,
#Deleted in new
chr17	57989038	57991521	chr17:57989038-57991521	0	-	57989038	57989038	8553170	1	2483,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	57989041	57993479	chr17:57989041-57993479	1	-	57989041	57989041	8553170	2	225,3831,	0,607,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	57989043	57994850	chr17:57989043-57994850	3	-	57989043	57989043	8553170	2	753,3969,	0,1838,
#Deleted in new
chr17	58003359	58007261	chr17:58003359-58007261	1	-	58005746	58007137	0	3	2614,185,318,	0,2983,3584,
#Deleted in new
chr17	58003492	58005134	chr17:58003492-58005134	0	-	58003492	58003492	8553170	2	226,212,	0,1430,
#Deleted in new
chr17	58003801	58006405	chr17:58003801-58006405	0	-	58005405	58006405	789624	5	200,119,203,173,63,	0,1121,1596,1999,2541,
#Deleted in new
chr17	58003806	58007232	chr17:58003806-58007232	0	-	58005746	58007137	0	4	195,1051,185,289,	0,1116,2536,3137,
#Deleted in new
chr17	58004587	58007261	chr17:58004587-58007261	1	-	58005018	58007137	789624	5	454,187,173,185,318,	0,826,1213,1755,2356,
#Deleted in new
chr17	58004821	58007273	chr17:58004821-58007273	1	-	58005031	58007137	789624	3	220,18,330,	0,1688,2122,
#Deleted in new
chr17	58004848	58007346	chr17:58004848-58007346	3	-	58005405	58007137	0	4	752,173,185,403,	0,952,1494,2095,
#Deleted in new
chr17	58004848	58007261	chr17:58004848-58007261	0	-	58006939	58007137	789624	4	752,173,185,355,	0,952,1494,2058,
#Deleted in new
chr17	58006241	58007346	chr17:58006241-58007346	0	-	58006241	58006241	8553170	2	286,403,	0,702,
#Deleted in new
chr17	58006673	58008187	chr17:58006673-58008187	3	+	58006673	58006673	8553170	1	1514,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	58050788	58060739	chr17:58050788-58060739	3	-	58050788	58050788	8553170	5	2331,244,292,64,117,	0,2756,8478,8859,9834,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	58076890	58083204	chr17:58076890-58083204	3	-	58076890	58076890	789624	3	2369,3255,489,	0,2471,5825,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	58083414	58095536	chr17:58083414-58095536	3	+	58087090	58089279	0	3	269,141,6395,	0,3667,5727,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	58095671	58101479	chr17:58095671-58101479	3	+	58095671	58095671	8553170	1	5808,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	58148448	58159555	chr17:58148448-58159555	3	+	58155153	58156086	789624	3	136,368,4421,	0,980,6686,
#Deleted in new
chr17	58155132	58156156	chr17:58155132-58156156	1	+	58155153	58156086	789624	1	1024,	0,
#Deleted in new
chr17	58157027	58157800	chr17:58157027-58157800	7	+	58157027	58157027	16724991	1	773,	0,
#Partially deleted in new
chr17	58166981	58171116	chr17:58166981-58171116	3	+	58169655	58170579	789624	2	72,1479,	0,2656,
#Deleted in new
chr17	58169400	58171411	chr17:58169400-58171411	1	+	58169655	58170579	789624	1	2011,	0,
#Partially deleted in new
chr17	58192736	58205174	chr17:58192736-58205174	3	+	58192846	58204423	789624	13	186,94,176,118,130,207,319,161,256,171,238,213,439,	0,301,634,977,1226,2227,4202,6303,6802,7488,10344,11485,11999,
#Deleted in new
chr17	58202351	58203003	chr17:58202351-58203003	3	-	58202351	58202351	8553170	1	652,	0,
#Partially deleted in new
chr17	58205436	58219305	chr17:58205436-58219305	3	-	58206078	58219230	789624	18	734,98,83,134,108,70,71,66,43,57,109,105,129,98,156,71,110,155,	0,846,1028,1648,2457,2668,3076,5222,5543,6941,7545,8328,8822,9304,10651,11229,13183,13714,
#Partially deleted in new
chr17	58205452	58219232	chr17:58205452-58219232	1	-	58206282	58219230	789624	16	718,98,108,70,71,66,43,57,109,105,129,98,156,71,110,82,	0,830,2441,2652,3060,5206,5527,6925,7529,8312,8806,9288,10635,11213,13167,13698,
#Partially deleted in new
chr17	58205739	58219605	chr17:58205739-58219605	1	-	58206078	58219511	789624	18	431,98,83,134,108,70,71,66,43,57,109,105,129,98,156,71,110,144,	0,543,725,1345,2154,2365,2773,4919,5240,6638,7242,8025,8519,9001,10348,10926,12880,13722,
#Partially deleted in new
chr17	58205740	58219236	chr17:58205740-58219236	0	-	58214309	58219230	789624	17	430,98,83,134,108,70,71,66,43,57,109,105,129,156,71,110,86,	0,542,724,1344,2153,2364,2772,4918,5239,6637,7241,8024,8518,10347,10925,12879,13410,
#Deleted in new
chr17	58205887	58206780	chr17:58205887-58206780	0	-	58205887	58205887	8553170	3	283,98,316,	0,395,577,
#Partially deleted in new
chr17	58207560	58210990	chr17:58207560-58210990	0	-	58207703	58210990	789624	6	169,108,70,71,66,11,	0,333,544,952,3098,3419,
#Partially deleted in new
chr17	58207561	58214379	chr17:58207561-58214379	0	-	58208136	58214379	789624	9	440,146,71,66,43,57,109,105,121,	0,543,951,3097,3418,4816,5420,6203,6697,
#Partially deleted in new
chr17	58207565	58213062	chr17:58207565-58213062	0	-	58207753	58213062	789624	7	436,70,71,66,43,57,81,	0,539,947,3093,3414,4812,5416,
#Partially deleted in new
chr17	58208140	58211120	chr17:58208140-58211120	0	-	58208140	58208140	8553170	3	34,71,462,	0,372,2518,
#Partially deleted in new
chr17	58210658	58219245	chr17:58210658-58219245	0	-	58214309	58219230	789624	9	66,43,57,109,105,129,98,110,95,	0,321,1719,2323,3106,3600,4082,7961,8492,
#Partially deleted in new
chr17	58213805	58219305	chr17:58213805-58219305	0	-	58214874	58219230	789624	7	64,129,158,156,71,110,155,	0,453,935,2282,2860,4814,5345,
#Partially deleted in new
chr17	58213858	58219253	chr17:58213858-58219253	0	-	58216669	58219230	789624	6	11,129,98,156,71,103,	0,400,882,2229,2807,5292,
#Partially deleted in new
chr17	58215605	58219230	chr17:58215605-58219230	0	-	58215605	58215605	8553170	4	638,71,110,80,	0,1060,3014,3545,
#Partially deleted in new
chr17	58238425	58268518	chr17:58238425-58268518	3	+	58242979	58267994	789624	13	314,78,88,161,118,130,207,325,161,253,174,238,732,	0,4552,5568,9052,10634,11140,11989,13756,16385,26296,27727,28923,29361,
#Partially deleted in new
chr17	58238425	58268517	chr17:58238425-58268517	1	+	58242979	58267994	789624	11	314,78,118,130,207,325,161,253,174,238,731,	0,4552,10634,11140,11989,13756,16385,26296,27727,28923,29361,
#Partially deleted in new
chr17	58238590	58268142	chr17:58238590-58268142	1	+	58247490	58267994	789624	12	149,78,161,118,130,207,325,161,253,174,238,356,	0,4387,8887,10469,10975,11824,13591,16220,26131,27562,28758,29196,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	58238670	58251253	chr17:58238670-58251253	0	+	58238670	58238670	8553170	7	69,78,88,161,118,130,839,	0,4307,5323,8807,10389,10895,11744,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	58238700	58251845	chr17:58238700-58251845	0	+	58238700	58238700	8553170	5	39,1104,161,636,1431,	0,4277,8777,10359,11714,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	58238700	58251292	chr17:58238700-58251292	0	+	58238700	58238700	8553170	5	39,78,118,130,878,	0,4277,10359,10865,11714,
#Partially deleted in new
chr17	58238700	58244458	chr17:58238700-58244458	0	+	58238700	58238700	8553170	3	39,78,465,	0,4277,5293,
#Partially deleted in new
chr17	58238714	58249668	chr17:58238714-58249668	0	+	58247490	58249668	789624	5	25,178,161,118,103,	0,4163,8763,10345,10851,
#Partially deleted in new
chr17	58249097	58268438	chr17:58249097-58268438	0	+	58249097	58252302	789624	9	80,130,65,217,161,253,174,238,652,	0,468,1317,3192,5713,15624,17055,18251,18689,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	58252181	58268518	chr17:58252181-58268518	0	+	58252181	58254581	789624	7	325,59,161,253,174,238,732,	0,2371,2629,12540,13971,15167,15605,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	58269855	58280935	chr17:58269855-58280935	3	-	58270655	58280758	0	12	1008,238,171,256,161,319,207,130,124,176,94,331,	0,1799,2892,3558,5686,7971,9152,9441,9667,9983,10510,10749,
#Partially deleted in new
chr17	58270728	58273492	chr17:58270728-58273492	0	-	58270728	58273492	789624	3	77,104,79,	0,2086,2685,
#Partially deleted in new
chr17	58275570	58278119	chr17:58275570-58278119	0	-	58275570	58275570	8553170	2	132,351,	0,2198,
#Deleted in new
chr17	58278836	58279399	chr17:58278836-58279399	0	-	58278836	58278836	8553170	2	378,103,	0,460,
#Deleted in new
chr17	58279875	58280687	chr17:58279875-58280687	0	-	58279875	58279875	8553170	3	139,176,83,	0,408,729,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	58301227	58305388	chr17:58301227-58305388	0	-	58301227	58301227	8553170	1	4161,	0,
#Partially deleted in new
chr17	58301230	58328760	chr17:58301230-58328760	1	-	58304369	58327920	789624	31	1217,62,111,72,104,33,72,169,152,100,840,192,240,378,152,831,110,116,173,205,21,51,105,123,90,84,78,192,129,108,1173,	0,3107,3830,4156,4309,4602,5111,5569,6380,6611,7310,8736,9281,9605,10340,10661,14792,15194,17049,17859,18878,19300,21077,21423,21719,22067,22237,23580,25062,25452,26357,
#Partially deleted in new
chr17	58301230	58306357	chr17:58301230-58306357	0	-	58302267	58306357	789624	6	1217,111,72,104,33,16,	0,3830,4156,4309,4602,5111,
#Partially deleted in new
chr17	58301247	58312216	chr17:58301247-58312216	0	-	58304369	58312216	789624	16	1200,62,111,72,104,33,45,169,152,100,840,192,240,378,152,325,	0,3090,3813,4139,4292,4585,5094,5552,6363,6594,7293,8719,9264,9588,10323,10644,
#Partially deleted in new
chr17	58301851	58306867	chr17:58301851-58306867	0	-	58301851	58301851	8553170	7	596,62,111,72,104,33,526,	0,2486,3209,3535,3688,3981,4490,
#Partially deleted in new
chr17	58302270	58328084	chr17:58302270-58328084	3	-	58304369	58327920	789624	32	177,62,111,72,104,33,72,169,152,100,840,192,240,378,152,831,110,116,173,205,21,51,105,123,90,84,78,192,180,129,108,497,	0,2067,2790,3116,3269,3562,4071,4529,5340,5571,6270,7696,8241,8565,9300,9621,13752,14154,16009,16819,17838,18260,20037,20383,20679,21027,21197,22540,23263,24022,24412,25317,
#Partially deleted in new
chr17	58302284	58306429	chr17:58302284-58306429	0	-	58302284	58302284	8553170	8	163,62,113,111,72,104,33,88,	0,2053,2326,2776,3102,3255,3548,4057,
#Partially deleted in new
chr17	58306341	58310740	chr17:58306341-58310740	0	-	58306341	58310740	789624	6	45,169,152,100,192,229,	0,458,1269,1500,3625,4170,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	58307442	58308591	chr17:58307442-58308591	0	-	58307442	58307442	8553170	3	320,100,51,	0,399,1098,
#Deleted in new
chr17	58311438	58311988	chr17:58311438-58311988	0	-	58311438	58311438	8553170	2	284,97,	0,453,
#Deleted in new
chr17	58322071	58322721	chr17:58322071-58322721	0	-	58322071	58322071	8553170	2	341,68,	0,582,
#Partially deleted in new
chr17	58325449	58353286	chr17:58325449-58353286	3	+	58325449	58325449	789624	5	279,72,232,171,1288,	0,2600,11998,26294,26549,
#Partially deleted in new
chr17	58328937	58352429	chr17:58328937-58352429	0	+	58328937	58328937	789624	4	137,232,180,431,	0,8510,22797,23061,
#Partially deleted in new
chr17	58329014	58352491	chr17:58329014-58352491	0	+	58329014	58329014	8553170	4	60,232,171,493,	0,8433,22729,22984,
#Partially deleted in new
chr17	58329604	58352377	chr17:58329604-58352377	0	+	58329604	58329604	789624	4	60,232,171,379,	0,7843,22139,22394,
#Deleted in new
chr17	58330883	58332508	chr17:58330883-58332508	3	-	58330883	58330883	8553170	1	1625,	0,
#Deleted in new
chr17	58331231	58331318	chr17:58331231-58331318	3	-	58331231	58331231	5263520	1	87,	0,
#Deleted in new
chr17	58335975	58336022	chr17:58335975-58336022	3	-	58335975	58335975	5263520	1	47,	0,
#Partially deleted in new
chr17	58337202	58352491	chr17:58337202-58352491	0	+	58337202	58337202	8553170	4	108,232,171,493,	0,245,14541,14796,
#Partially deleted in new
chr17	58337214	58353719	chr17:58337214-58353719	0	+	58337214	58337214	789624	4	96,232,180,1721,	0,233,14520,14784,
#Partially deleted in new
chr17	58337245	58415766	chr17:58337245-58415766	0	+	58337245	58337245	8553170	3	434,105,301,	0,57660,78220,
#Partially deleted in new
chr17	58337307	58353719	chr17:58337307-58353719	1	+	58337307	58337307	789624	4	372,64,180,1721,	0,8972,14427,14691,
#Partially deleted in new
chr17	58337335	58351743	chr17:58337335-58351743	0	+	58337335	58337335	8553170	3	344,205,9,	0,1907,14399,
#Partially deleted in new
chr17	58337348	58353287	chr17:58337348-58353287	0	+	58337348	58337348	8553170	3	331,171,1289,	0,14395,14650,
#Partially deleted in new
chr17	58337357	58353287	chr17:58337357-58353287	0	+	58337357	58337357	8553170	3	322,180,1289,	0,14377,14641,
#Partially deleted in new
chr17	58345174	58352167	chr17:58345174-58352167	0	-	58345174	58345174	8553170	4	1139,54,107,101,	0,2013,6227,6892,
#Partially deleted in new
chr17	58345177	58352202	chr17:58345177-58352202	3	-	58346245	58352135	0	5	1136,54,56,107,136,	0,2010,2351,6224,6889,
#Partially deleted in new
chr17	58345205	58417595	chr17:58345205-58417595	3	-	58351491	58415577	8553170	13	1108,54,56,177,107,1356,103,162,105,132,75,123,2270,	0,1982,2323,2469,6196,12262,14943,15577,17338,18069,18320,25705,70120,
#Partially deleted in new
chr17	58345246	58352423	chr17:58345246-58352423	1	-	58346245	58351454	789624	5	1067,54,56,107,359,	0,1941,2282,6155,6818,
#Partially deleted in new
chr17	58345911	58347611	chr17:58345911-58347611	0	-	58345911	58345911	8553170	3	402,54,83,	0,1276,1617,
#Partially deleted in new
chr17	58346015	58351661	chr17:58346015-58351661	1	-	58346245	58351550	789624	4	298,54,56,260,	0,1172,1513,5386,
#Partially deleted in new
chr17	58346211	58353093	chr17:58346211-58353093	1	-	58346245	58352135	0	6	102,54,56,107,112,143,	0,976,1317,5190,5855,6739,
#Partially deleted in new
chr17	58347199	58352136	chr17:58347199-58352136	0	-	58351491	58352135	789624	4	42,56,107,113,	0,329,4202,4824,
#Partially deleted in new
chr17	58352499	58417352	chr17:58352499-58417352	3	-	58354942	58415577	0	10	2487,1356,103,162,105,132,75,123,637,336,	0,4968,7649,8283,10044,10775,11026,18411,62826,64517,
#Partially deleted in new
chr17	58353675	58417582	chr17:58353675-58417582	1	-	58354942	58415577	0	10	1311,1356,103,162,105,132,75,123,434,566,	0,3792,6473,7107,8868,9599,9850,17235,61650,63341,
#Partially deleted in new
chr17	58353675	58415641	chr17:58353675-58415641	1	-	58354942	58415577	0	8	1311,1356,103,162,105,132,75,316,	0,3792,6473,7107,8868,9599,9850,61650,
#Partially deleted in new
chr17	58353675	58417533	chr17:58353675-58417533	1	-	58354942	58415577	0	9	1311,1356,103,162,105,132,75,123,2208,	0,3792,6473,7107,8868,9599,9850,17235,61650,
#Partially deleted in new
chr17	58354926	58402721	chr17:58354926-58402721	1	-	58354942	58363594	0	9	60,1356,103,162,105,132,75,123,82,	0,2541,5222,5856,7617,8348,8599,15984,47713,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	58356982	58417085	chr17:58356982-58417085	1	-	58357165	58363594	789624	8	1841,103,162,105,132,75,123,69,	0,3166,3800,5561,6292,6543,13928,60034,
#Deleted in new
chr17	58363149	58363592	chr17:58363149-58363592	0	-	58363149	58363149	8553170	2	257,67,	0,376,
#Deleted in new
chr17	58417012	58417595	chr17:58417012-58417595	0	-	58417012	58417012	8553170	2	186,311,	0,272,
#Partially deleted in new
chr17	58420166	58488384	chr17:58420166-58488384	3	-	58422359	58488274	789624	6	2264,178,522,95,375,660,	0,38601,42615,46718,59726,67558,
#Deleted in new
chr17	58476137	58476950	chr17:58476137-58476950	7	-	58476137	58476137	16724991	1	813,	0,
#Partially deleted in new
chr17	58489528	58517851	chr17:58489528-58517851	1	-	58491662	58516582	789624	18	2312,89,111,1399,155,186,196,112,129,197,114,97,161,83,117,90,39,35,	0,2982,3313,5403,14215,14774,15250,15943,17214,17594,18632,18939,19152,21900,22861,23323,27051,28288,
#Partially deleted in new
chr17	58489536	58517905	chr17:58489536-58517905	3	-	58491662	58516582	789624	19	2304,89,111,1399,155,171,186,196,112,129,197,114,97,161,83,117,90,39,89,	0,2974,3305,5395,14207,14513,14766,15242,15935,17206,17586,18624,18931,19144,21892,22853,23315,27043,28280,
#Partially deleted in new
chr17	58491480	58492738	chr17:58491480-58492738	0	-	58491480	58491480	8553170	2	360,228,	0,1030,
#Partially deleted in new
chr17	58507984	58511511	chr17:58507984-58511511	0	-	58507984	58507984	8553170	4	290,97,161,83,	0,483,696,3444,
#Partially deleted in new
chr17	58508167	58517855	chr17:58508167-58517855	0	-	58508560	58516582	789624	7	107,97,83,117,90,39,39,	0,300,3261,4222,4684,8412,9649,
#Deleted in new
chr17	58508321	58508876	chr17:58508321-58508876	0	-	58508321	58508321	8553170	2	243,196,	0,359,
#Partially deleted in new
chr17	58508467	58514624	chr17:58508467-58514624	0	-	58508467	58514407	789624	6	97,161,83,117,90,262,	0,213,2961,3922,4384,5895,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	58510596	58514624	chr17:58510596-58514624	0	-	58511424	58514407	789624	5	35,777,117,90,262,	0,138,1793,2255,3766,
#Partially deleted in new
chr17	58511447	58517839	chr17:58511447-58517839	0	-	58511447	58515006	789624	6	64,117,90,92,39,23,	0,942,1404,3544,5132,6369,
#Partially deleted in new
chr17	58511450	58514036	chr17:58511450-58514036	0	-	58511450	58511499	789624	4	61,117,90,49,	0,939,1401,2537,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	58519836	58556925	chr17:58519836-58556925	3	+	58519836	58519836	789624	5	141,117,142,136,117,	0,5864,23620,24699,36972,
#Partially deleted in new
chr17	58520249	58527144	chr17:58520249-58527144	1	-	58520425	58527144	789624	12	236,100,163,97,102,118,135,124,87,94,297,3,	0,493,748,1004,1295,1486,1717,4828,5445,5970,6432,6892,
#Partially deleted in new
chr17	58520249	58527981	chr17:58520249-58527981	1	-	58520425	58526229	789624	12	236,100,163,97,102,118,135,124,87,94,297,156,	0,493,748,1004,1295,1486,1717,4828,5445,5970,6432,7576,
#Partially deleted in new
chr17	58520254	58532050	chr17:58520254-58532050	1	-	58521881	58531963	789624	10	231,418,97,102,366,124,87,94,297,90,	0,488,999,1290,1481,4823,5440,5965,6427,11706,
#Partially deleted in new
chr17	58520255	58529351	chr17:58520255-58529351	3	-	58520425	58529174	789624	12	230,100,163,97,102,118,135,124,87,94,297,237,	0,487,742,998,1289,1480,1711,4822,5439,5964,6426,8859,
#Partially deleted in new
chr17	58520255	58532050	chr17:58520255-58532050	0	-	58520255	58520255	8553170	11	230,418,97,102,118,135,124,87,94,297,90,	0,487,998,1289,1480,1711,4822,5439,5964,6426,11705,
#Partially deleted in new
chr17	58520255	58529279	chr17:58520255-58529279	1	-	58520770	58529174	789624	11	230,47,163,97,102,118,135,124,87,94,165,	0,487,742,998,1289,1480,1711,4822,5439,5964,8859,
#Partially deleted in new
chr17	58520255	58528030	chr17:58520255-58528030	0	-	58520255	58520255	8553170	11	230,100,163,97,102,118,135,124,87,759,875,	0,487,742,998,1289,1480,1711,4822,5439,5964,6900,
#Partially deleted in new
chr17	58520255	58529203	chr17:58520255-58529203	0	-	58520255	58520255	8553170	7	230,1359,124,87,94,212,89,	0,487,4822,5439,5964,6511,8859,
#Partially deleted in new
chr17	58520255	58529350	chr17:58520255-58529350	0	-	58520255	58520255	789624	11	230,100,163,97,102,118,135,124,87,759,236,	0,487,742,998,1289,1480,1711,4822,5439,5964,8859,
#Partially deleted in new
chr17	58520257	58540818	chr17:58520257-58540818	1	-	58520425	58540673	789624	13	228,100,163,97,102,118,135,124,87,94,297,97,153,	0,485,740,996,1287,1478,1709,4820,5437,5962,6424,18854,20408,
#Partially deleted in new
chr17	58520298	58529303	chr17:58520298-58529303	1	-	58520425	58529174	789624	11	187,100,163,97,102,118,135,124,87,94,189,	0,444,699,955,1246,1437,1668,4779,5396,5921,8816,
#Partially deleted in new
chr17	58520358	58532046	chr17:58520358-58532046	1	-	58520425	58531963	789624	12	127,100,163,97,102,118,135,124,87,94,297,86,	0,384,639,895,1186,1377,1608,4719,5336,5861,6323,11602,
#Partially deleted in new
chr17	58520358	58540818	chr17:58520358-58540818	1	-	58520425	58540701	789624	12	127,100,163,97,102,118,135,124,87,94,297,153,	0,384,639,895,1186,1377,1608,4719,5336,5861,6323,20307,
#Partially deleted in new
chr17	58520425	58529313	chr17:58520425-58529313	0	-	58520425	58520425	8553170	11	60,418,97,102,118,135,124,87,94,297,199,	0,317,828,1119,1310,1541,4652,5269,5794,6256,8689,
#Partially deleted in new
chr17	58521548	58532054	chr17:58521548-58532054	1	-	58521881	58531963	789624	5	553,124,87,94,94,	0,3529,4146,4671,10412,
#Partially deleted in new
chr17	58521747	58532066	chr17:58521747-58532066	0	-	58521747	58531963	789624	7	106,135,124,87,94,72,106,	0,219,3330,3947,4472,9732,10213,
#Partially deleted in new
chr17	58522020	58529313	chr17:58522020-58529313	0	-	58526252	58529174	789624	6	81,124,87,94,47,199,	0,3057,3674,4199,4911,7094,
#Partially deleted in new
chr17	58522050	58532065	chr17:58522050-58532065	0	-	58526252	58531963	789624	6	51,124,87,94,47,105,	0,3027,3644,4169,4881,9910,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	58524587	58528569	chr17:58524587-58528569	0	-	58524587	58524587	8553170	2	1194,2350,	0,1632,
#Partially deleted in new
chr17	58525077	58532075	chr17:58525077-58532075	0	-	58525077	58531963	789624	6	124,87,94,297,72,115,	0,617,1142,1604,6402,6883,
#Partially deleted in new
chr17	58525161	58532037	chr17:58525161-58532037	0	-	58525161	58525161	8553170	4	40,87,759,77,	0,533,1058,6799,
#Partially deleted in new
chr17	58525539	58556977	chr17:58525539-58556977	0	+	58525539	58525539	8553170	4	278,142,136,169,	0,17917,18996,31269,
#Partially deleted in new
chr17	58525668	58544307	chr17:58525668-58544307	1	+	58525668	58525668	8553170	2	149,851,	0,17788,
#Partially deleted in new
chr17	58526222	58539158	chr17:58526222-58539158	0	-	58526222	58526222	8553170	2	188,47,	0,12889,
#Partially deleted in new
chr17	58526253	58532065	chr17:58526253-58532065	0	-	58526253	58526253	8553170	3	157,297,105,	0,428,5707,
#Deleted in new
chr17	58526314	58527998	chr17:58526314-58527998	0	-	58526314	58526314	8553170	3	96,297,173,	0,367,1511,
#Deleted in new
chr17	58526562	58528013	chr17:58526562-58528013	0	-	58526562	58526562	8553170	2	416,188,	0,1263,
#Partially deleted in new
chr17	58526576	58532286	chr17:58526576-58532286	0	-	58526576	58526576	8553170	2	402,147,	0,5563,
#Partially deleted in new
chr17	58526577	58531642	chr17:58526577-58531642	0	-	58526577	58526577	8553170	2	401,163,	0,4902,
#Partially deleted in new
chr17	58526764	58531941	chr17:58526764-58531941	0	-	58526764	58531482	789624	2	214,462,	0,4715,
#Deleted in new
chr17	58529817	58531524	chr17:58529817-58531524	0	-	58529817	58529817	8553170	1	1707,	0,
#Deleted in new
chr17	58541586	58544368	chr17:58541586-58544368	3	-	58541814	58544186	789624	2	380,1743,	0,1039,
#Partially deleted in new
chr17	58556677	58692055	chr17:58556677-58692055	3	-	58557010	58652001	0	33	370,52,110,93,100,78,69,100,206,128,63,82,67,120,101,282,86,126,107,791,151,191,152,179,124,114,131,82,137,166,115,137,117,	0,1121,2775,4842,8191,9069,12514,13707,15243,16503,17509,20697,22987,24933,27822,29123,30903,31218,36877,42198,45128,45722,48300,54483,56743,58554,59497,60860,64972,66169,73762,95188,135261,
#Partially deleted in new
chr17	58556679	58692023	chr17:58556679-58692023	1	-	58557010	58652001	0	33	368,52,110,93,100,78,69,100,206,128,63,82,67,120,101,282,86,126,107,791,151,191,152,179,124,114,149,82,137,166,115,137,85,	0,1119,2773,4840,8189,9067,12512,13705,15241,16501,17507,20695,22985,24931,27820,29121,30901,31216,36875,42196,45126,45720,48298,54481,56741,58552,59495,60858,64970,66167,73760,95186,135259,
#Partially deleted in new
chr17	58556679	58692023	chr17:58556679-58692023	1	-	58557010	58652001	0	32	368,52,110,93,100,78,69,100,206,128,63,82,67,101,282,86,126,107,791,151,191,152,179,124,114,131,82,137,166,115,137,85,	0,1119,2773,4840,8189,9067,12512,13705,15241,16501,17507,20695,22985,27820,29121,30901,31216,36875,42196,45126,45720,48298,54481,56741,58552,59495,60858,64970,66167,73760,95186,135259,
#Partially deleted in new
chr17	58556679	58692045	chr17:58556679-58692045	0	-	58648047	58652001	789624	32	368,52,110,93,100,78,69,100,206,128,63,82,67,101,282,86,126,107,791,151,191,152,179,124,114,131,137,166,115,121,137,107,	0,1119,2773,4840,8189,9067,12512,13705,15241,16501,17507,20695,22985,27820,29121,30901,31216,36875,42196,45126,45720,48298,54481,56741,58552,59495,64970,66167,73760,91312,95186,135259,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	58556679	58564258	chr17:58556679-58564258	0	-	58556679	58556679	8553170	4	368,110,93,102,	0,2773,4840,7477,
#Partially deleted in new
chr17	58565751	58573251	chr17:58565751-58573251	0	-	58567900	58573251	789624	6	73,157,69,100,206,71,	0,2003,3440,4633,6169,7429,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	58631640	58631836	chr17:58631640-58631836	3	-	58631640	58631640	8553170	1	196,	0,
#Partially deleted in new
chr17	58660423	58692018	chr17:58660423-58692018	3	-	58660576	58661599	789624	2	1406,80,	0,31515,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	58666536	58666697	chr17:58666536-58666697	3	-	58666536	58666536	8553170	1	161,	0,
#Partially deleted in new
chr17	58675285	58675462	chr17:58675285-58675462	7	+	58675285	58675285	16724991	1	177,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	58677573	58677737	chr17:58677573-58677737	3	-	58677573	58677573	8553170	1	164,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	58679526	58679690	chr17:58679526-58679690	3	-	58679526	58679526	8553170	1	164,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	58692572	58735611	chr17:58692572-58735611	3	+	58692643	58734222	789624	9	216,259,167,134,132,67,61,61,1494,	0,2358,4120,10623,17286,28173,31467,39911,41545,
#Partially deleted in new
chr17	58692572	58709911	chr17:58692572-58709911	0	+	58695136	58709911	789624	5	113,259,167,134,53,	0,2358,4120,10623,17286,
#Partially deleted in new
chr17	58692572	58732766	chr17:58692572-58732766	1	+	58692643	58732559	789624	8	216,259,167,134,132,67,61,283,	0,2358,4120,10623,17286,28173,31467,39911,
#Partially deleted in new
chr17	58692575	58705913	chr17:58692575-58705913	0	+	58692575	58692575	8553170	5	57,259,167,134,36,	0,2355,4117,10620,13302,
#Partially deleted in new
chr17	58692601	58734331	chr17:58692601-58734331	0	+	58692643	58692802	789624	8	1049,259,167,134,132,61,61,214,	0,2329,4091,10594,17257,31438,39882,41516,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	58692601	58694880	chr17:58692601-58694880	0	+	58692601	58692601	8553170	2	187,1530,	0,749,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	58692605	58695333	chr17:58692605-58695333	0	+	58692643	58692802	789624	2	1206,403,	0,2325,
#Partially deleted in new
chr17	58692605	58734325	chr17:58692605-58734325	0	+	58692643	58703196	789624	9	183,259,134,145,132,67,61,64,208,	0,2325,10590,13272,17253,28140,31434,39875,41512,
#Partially deleted in new
chr17	58692614	58734327	chr17:58692614-58734327	0	+	58692643	58703196	789624	8	174,259,134,132,67,61,61,210,	0,2316,10581,17244,28131,31425,39869,41503,
#Partially deleted in new
chr17	58692627	58695336	chr17:58692627-58695336	1	+	58692643	58695193	789624	2	161,406,	0,2303,
#Partially deleted in new
chr17	58692662	58732519	chr17:58692662-58732519	0	+	58692662	58696709	789624	7	126,167,134,132,67,61,36,	0,4030,10533,17196,28083,31377,39821,
#Partially deleted in new
chr17	58694989	58709876	chr17:58694989-58709876	0	+	58694989	58709876	789624	5	200,167,134,120,18,	0,1703,8206,11499,14869,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	58695049	58700253	chr17:58695049-58700253	0	+	58695049	58699963	789624	3	140,167,379,	0,1643,4825,
#Partially deleted in new
chr17	58695147	58734229	chr17:58695147-58734229	0	+	58695147	58734222	789624	8	42,167,134,132,67,61,64,112,	0,1545,8048,14711,25598,28892,37333,38970,
#Partially deleted in new
chr17	58709638	58734327	chr17:58709638-58734327	0	+	58709638	58709638	8553170	5	352,67,61,61,210,	0,11107,14401,22845,24479,
#Partially deleted in new
chr17	58709818	58734342	chr17:58709818-58734342	0	+	58709818	58709818	8553170	3	172,67,225,	0,10927,24299,
#Partially deleted in new
chr17	58709858	58734331	chr17:58709858-58734331	0	+	58709858	58734181	789624	4	132,67,61,214,	0,10887,22625,24259,
#Partially deleted in new
chr17	58732331	58734331	chr17:58732331-58734331	0	+	58732331	58732331	8553170	2	213,214,	0,1786,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	58747054	58747340	chr17:58747054-58747340	3	+	58747054	58747054	8553170	1	286,	0,
#Partially deleted in new
chr17	58755868	58985176	chr17:58755868-58985176	3	+	58755997	58981031	789624	7	593,119,200,189,144,94,5203,	0,199780,209825,213670,216263,216963,224105,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	58785322	58785608	chr17:58785322-58785608	3	-	58785322	58785322	8553170	1	286,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	58835898	58835994	chr17:58835898-58835994	3	+	58835898	58835898	8553170	1	96,	0,
#Partially deleted in new
chr17	58897775	58899692	chr17:58897775-58899692	7	+	58897775	58897775	16724991	2	58,325,	0,1592,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	58951184	58951513	chr17:58951184-58951513	3	+	58951184	58951184	8553170	1	329,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	58965951	58966727	chr17:58965951-58966727	3	+	58965951	58965951	8553170	1	776,	0,
#Partially deleted in new
chr17	58982637	59015617	chr17:58982637-59015617	0	-	58982917	59015617	789624	5	284,79,144,119,8,	0,16743,18960,29690,32972,
#Partially deleted in new
chr17	58982650	59106921	chr17:58982650-59106921	3	-	58982917	59106461	0	25	271,79,117,119,190,129,309,195,86,137,216,115,180,77,82,51,125,68,124,123,88,117,41,102,481,	0,16730,18947,29677,32959,34645,45764,49245,59162,65032,66527,68563,74224,78381,79916,81704,88172,92996,97103,98446,101351,105640,108649,121642,123790,
#Partially deleted in new
chr17	58982650	59012407	chr17:58982650-59012407	0	-	58982917	59012407	789624	3	271,79,80,	0,16730,29677,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr17	58998199	59106740	chr17:58998199-59106740	0	-	59090052	59106461	789624	24	1260,119,190,129,309,195,86,137,216,115,180,77,82,51,125,68,124,123,88,117,76,41,102,300,	0,14128,17410,19096,30215,33696,43613,49483,50978,53014,58675,62832,64367,66155,72623,77447,81554,82897,85802,90091,91817,93100,106093,108241,
#Partially deleted in new
chr17	58998201	59106721	chr17:58998201-59106721	1	-	58999376	59106461	0	24	1258,117,119,190,129,309,195,86,137,216,115,180,77,82,51,125,68,124,123,88,117,41,102,281,	0,3396,14126,17408,19094,30213,33694,43611,49481,50976,53012,58673,62830,64365,66153,72621,77445,81552,82895,85800,90089,93098,106091,108239,
#Partially deleted in new
chr17	58998986	59106826	chr17:58998986-59106826	1	-	58999376	59106461	0	23	473,117,119,190,129,309,195,86,137,216,115,180,77,82,51,125,68,124,123,88,117,41,386,	0,2611,13341,16623,18309,29428,32909,42826,48696,50191,52227,57888,62045,63580,65368,71836,76660,80767,82110,85015,89304,92313,107454,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	59059225	59059493	chr17:59059225-59059493	3	+	59059225	59059225	8553170	1	268,	0,
#Partially deleted in new
chr17	59061088	59081162	chr17:59061088-59081162	0	-	59061088	59081162	789624	8	20,82,51,125,48,68,124,66,	0,1478,3266,9734,12005,14558,18665,20008,
#Partially deleted in new
chr17	59064151	59079807	chr17:59064151-59079807	0	-	59064151	59064151	8553170	4	254,125,68,54,	0,6671,11495,15602,
#Partially deleted in new
chr17	59075683	59106715	chr17:59075683-59106715	0	-	59079864	59106461	789624	5	31,124,41,102,275,	0,4070,15616,28609,30757,
#Partially deleted in new
chr17	59079797	59106459	chr17:59079797-59106459	0	-	59081158	59106459	789624	6	80,123,117,41,102,19,	0,1299,8493,11502,24495,26643,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	59087978	59106664	chr17:59087978-59106664	0	-	59087978	59087978	8553170	5	429,76,41,102,224,	0,2038,3321,16314,18462,
#Partially deleted in new
chr17	59087979	59106711	chr17:59087979-59106711	0	-	59087979	59087979	8553170	4	428,41,102,271,	0,3320,16313,18461,
#Partially deleted in new
chr17	59088225	59106468	chr17:59088225-59106468	1	-	59088259	59106461	789624	4	182,41,102,28,	0,3074,16067,18215,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	59106597	59118267	chr17:59106597-59118267	3	+	59106597	59106597	8553170	2	994,344,	0,11326,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	59109950	59155269	chr17:59109950-59155269	3	-	59112276	59155163	0	4	2395,177,87,139,	0,9368,21330,45180,
#Partially deleted in new
chr17	59111885	59155184	chr17:59111885-59155184	1	-	59112332	59155083	789624	2	460,229,	0,43070,
#Partially deleted in new
chr17	59111887	59155184	chr17:59111887-59155184	1	-	59112276	59155163	789624	3	458,177,54,	0,7431,43243,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	59111889	59155182	chr17:59111889-59155182	0	-	59124362	59155163	789624	5	456,177,122,87,52,	0,7429,12417,19391,43241,
#Partially deleted in new
chr17	59111942	59155260	chr17:59111942-59155260	0	-	59111942	59111942	8553170	2	403,130,	0,43188,
#Partially deleted in new
chr17	59111955	59155248	chr17:59111955-59155248	1	-	59112276	59155163	789624	3	390,87,118,	0,19325,43175,
#Partially deleted in new
chr17	59112046	59155194	chr17:59112046-59155194	1	-	59112332	59155083	0	3	299,87,239,	0,19234,42909,
#Partially deleted in new
chr17	59112090	59155174	chr17:59112090-59155174	1	-	59112332	59155163	789624	4	255,197,87,44,	0,7208,19190,43040,
#Partially deleted in new
chr17	59112261	59155177	chr17:59112261-59155177	0	-	59119473	59155083	789624	4	84,177,87,222,	0,7057,19019,42694,
#Partially deleted in new
chr17	59119386	59151801	chr17:59119386-59151801	0	-	59119386	59151771	789624	3	109,87,33,	0,11894,32382,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	59129275	59129458	chr17:59129275-59129458	3	-	59129275	59129275	8553170	1	183,	0,
#Deleted in new
chr17	59137757	59137872	chr17:59137757-59137872	3	-	59137757	59137757	5263520	1	115,	0,
#Deleted in new
chr17	59151135	59151221	chr17:59151135-59151221	3	-	59151135	59151135	5263520	1	86,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	59155498	59202568	chr17:59155498-59202568	1	+	59169752	59201631	789624	10	307,133,151,123,243,99,113,60,97,1006,	0,14249,29555,29941,37993,39258,39832,42045,42194,46064,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	59155731	59193686	chr17:59155731-59193686	0	+	59169752	59193686	789624	7	74,118,66,133,151,123,195,	0,5027,7867,14016,29322,29708,37760,
#Partially deleted in new
chr17	59155744	59169819	chr17:59155744-59169819	0	+	59169752	59169819	789624	3	61,66,72,	0,7854,14003,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	59155745	59204705	chr17:59155745-59204705	0	+	59169752	59201631	789624	11	60,133,151,123,243,99,113,60,97,195,1060,	0,14002,29308,29694,37746,39011,39585,41798,41947,45817,47900,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	59155745	59185513	chr17:59155745-59185513	0	+	59160800	59185513	789624	5	60,118,133,151,74,	0,5013,14002,29308,29694,
#Partially deleted in new
chr17	59155752	59185562	chr17:59155752-59185562	0	+	59155752	59155752	8553170	3	53,133,509,	0,13995,29301,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	59155756	59203852	chr17:59155756-59203852	0	+	59169752	59201631	789624	11	49,133,151,123,243,99,113,60,97,181,392,	0,13991,29297,29683,37735,39000,39574,41787,41936,45806,47704,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	59155756	59203834	chr17:59155756-59203834	3	+	59169752	59201631	789624	11	49,133,151,123,243,99,113,60,97,181,374,	0,13991,29297,29683,37735,39000,39574,41787,41936,45806,47704,
#Partially deleted in new
chr17	59174982	59181787	chr17:59174982-59181787	7	-	59174982	59174982	16724991	5	145,86,59,231,277,	0,2186,3490,4666,6528,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	59197552	59197873	chr17:59197552-59197873	0	+	59197552	59197801	789624	2	51,181,	0,140,
#Partially deleted in new
chr17	59197565	59215226	chr17:59197565-59215226	3	+	59197565	59215002	789624	3	38,97,422,	0,127,17239,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	59202676	59203829	chr17:59202676-59203829	3	-	59202676	59202676	8553170	2	224,97,	0,1056,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	59209399	59215239	chr17:59209399-59215239	3	+	59210051	59215002	789624	5	112,1911,146,873,435,	0,500,2941,3329,5405,
#Deleted in new
chr17	59209866	59212044	chr17:59209866-59212044	1	+	59210051	59211818	789624	1	2178,	0,
#Partially deleted in new
chr17	59210009	59215247	chr17:59210009-59215247	1	+	59210051	59215002	789624	4	1801,146,873,443,	0,2331,2719,4795,
#Deleted in new
chr17	59210021	59213127	chr17:59210021-59213127	0	+	59210021	59210021	8553170	3	240,146,399,	0,2319,2707,
#Partially deleted in new
chr17	59211422	59215200	chr17:59211422-59215200	0	+	59211422	59214872	789624	4	388,146,214,396,	0,918,1306,3382,
#Deleted in new
chr17	59211721	59212856	chr17:59211721-59212856	0	+	59211721	59211818	789624	3	309,146,128,	0,619,1007,
#Partially deleted in new
chr17	59220466	59273738	chr17:59220466-59273738	0	+	59220609	59257776	789624	9	285,43,136,46,90,134,60,52,88,	0,14025,24947,28273,37284,46574,50469,52318,53184,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	59220472	59274512	chr17:59220472-59274512	3	+	59220609	59273773	789624	10	279,43,136,46,119,90,134,60,52,862,	0,14019,24941,28267,36649,37278,46568,50463,52312,53178,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	59220521	59275505	chr17:59220521-59275505	1	+	59220609	59275198	789624	10	230,43,136,46,119,90,134,60,21,386,	0,13970,24892,28218,36600,37229,46519,50414,52263,54598,
#Partially deleted in new
chr17	59220529	59273716	chr17:59220529-59273716	0	+	59220609	59270992	789624	9	222,43,136,46,119,90,60,52,66,	0,13962,24884,28210,36592,37221,50406,52255,53121,
#Partially deleted in new
chr17	59220561	59273021	chr17:59220561-59273021	1	+	59220609	59272887	789624	9	190,43,136,46,119,90,134,60,237,	0,13930,24852,28178,36560,37189,46479,50374,52223,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	59220681	59249228	chr17:59220681-59249228	0	+	59220681	59220681	8553170	4	70,43,136,489,	0,13810,24732,28058,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	59260747	59260846	chr17:59260747-59260846	3	+	59260747	59260747	8553170	1	99,	0,
#Partially deleted in new
chr17	59267043	59275967	chr17:59267043-59275967	0	+	59267043	59273773	789624	5	131,60,52,213,129,	0,3892,5741,6607,8795,
#Deleted in new
chr17	59281129	59281343	chr17:59281129-59281343	7	+	59281129	59281129	16724991	1	214,	0,
#Partially deleted in new
chr17	59331688	59397291	chr17:59331688-59397291	0	+	59331688	59331688	8553170	4	136,44,109,191,	0,56638,57671,65412,
#Partially deleted in new
chr17	59331701	59401729	chr17:59331701-59401729	3	+	59353409	59397190	789624	5	123,312,44,109,4629,	0,21513,56625,57658,65399,
#Partially deleted in new
chr17	59331720	59356303	chr17:59331720-59356303	0	+	59331720	59331720	8553170	2	104,3089,	0,21494,
#Partially deleted in new
chr17	59345155	59397376	chr17:59345155-59397376	1	+	59353409	59397190	789624	5	140,312,44,109,276,	0,8059,43171,44204,51945,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	59362664	59363278	chr17:59362664-59363278	3	+	59362664	59362664	8553170	1	614,	0,
#Deleted in new
chr17	59366082	59366154	chr17:59366082-59366154	3	+	59366082	59366082	5263520	1	72,	0,
#Partially deleted in new
chr17	59388839	59397149	chr17:59388839-59397149	0	+	59388839	59388839	8553170	2	629,49,	0,8261,
#Partially deleted in new
chr17	59400487	59403303	chr17:59400487-59403303	3	-	59400487	59400487	8553170	2	144,71,	0,2745,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	59430669	59526872	chr17:59430669-59526872	3	-	59430669	59430669	8553170	7	251,112,105,35,130,116,393,	0,2984,3747,19072,21304,72309,95810,
#Partially deleted in new
chr17	59430868	59526946	chr17:59430868-59526946	0	-	59430868	59430868	789624	3	52,116,467,	0,72110,95611,
#Partially deleted in new
chr17	59565524	59608345	chr17:59565524-59608345	3	+	59565671	59607172	789624	18	259,168,146,120,228,67,132,100,87,183,81,158,115,109,95,70,229,1313,	0,1102,4993,7591,8215,8663,9815,11741,13947,14172,20628,22371,33212,33850,36997,39590,39921,41508,
#Partially deleted in new
chr17	59565557	59574259	chr17:59565557-59574259	0	+	59565671	59573141	789624	5	226,168,120,228,72,	0,1069,7558,8182,8630,
#Partially deleted in new
chr17	59565610	59573756	chr17:59565610-59573756	0	+	59565671	59570538	789624	5	173,83,146,120,17,	0,1016,4907,7505,8129,
#Partially deleted in new
chr17	59565611	59607258	chr17:59565611-59607258	1	+	59565671	59607172	789624	17	172,83,120,228,67,132,100,87,183,81,158,115,109,95,70,229,226,	0,1015,7504,8128,8576,9728,11654,13860,14085,20541,22284,33125,33763,36910,39503,39834,41421,
#Partially deleted in new
chr17	59565612	59573882	chr17:59565612-59573882	0	+	59565671	59573882	789624	4	171,146,120,143,	0,4905,7503,8127,
#Partially deleted in new
chr17	59565622	59575364	chr17:59565622-59575364	0	+	59565671	59575364	789624	7	101,168,146,120,228,67,25,	0,1004,4895,7493,8117,8565,9717,
#Partially deleted in new
chr17	59577265	59599481	chr17:59577265-59599481	0	+	59577265	59599481	789624	6	100,87,183,158,115,107,	0,2206,2431,10630,21471,22109,
#Partially deleted in new
chr17	59587920	59599667	chr17:59587920-59599667	0	+	59587920	59587920	8553170	3	133,115,293,	0,10816,11454,
#Partially deleted in new
chr17	59599373	59605656	chr17:59599373-59605656	0	+	59599373	59599373	8553170	3	110,95,542,	0,3148,5741,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	59603286	59607559	chr17:59603286-59607559	0	+	59603286	59603286	8553170	3	1898,229,527,	0,2159,3746,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	59618552	59619714	chr17:59618552-59619714	3	-	59618552	59618552	8553170	1	1162,	0,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr17	59619688	59696956	chr17:59619688-59696956	1	+	59620131	59693852	789624	32	485,220,269,162,114,174,198,201,153,123,138,165,181,164,126,143,235,123,146,184,193,158,165,108,168,150,132,111,171,222,76,3229,	0,24587,27709,28551,31514,36165,40702,41754,44153,45098,46414,46791,47108,49088,53958,55012,57265,59708,61223,61606,61958,62582,62940,63218,63406,63698,63936,64186,65367,65898,70947,74039,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr17	59619857	59696310	chr17:59619857-59696310	3	+	59620131	59693852	0	32	316,208,269,162,114,174,198,201,153,123,138,165,181,164,126,143,235,123,146,184,193,158,165,108,168,150,132,111,171,222,76,2583,	0,24418,27540,28382,31345,35996,40533,41585,43984,44929,46245,46622,46939,48919,53789,54843,57096,59539,61054,61437,61789,62413,62771,63049,63237,63529,63767,64017,65198,65729,70778,73870,
#Partially deleted in new
chr17	59619857	59690826	chr17:59619857-59690826	1	+	59620131	59690728	0	31	316,208,269,162,114,174,198,201,153,123,138,165,181,164,126,143,235,123,146,184,193,158,165,108,168,150,132,111,171,222,191,	0,24418,27540,28382,31345,35996,40533,41585,43984,44929,46245,46622,46939,48919,53789,54843,57096,59539,61054,61437,61789,62413,62771,63049,63237,63529,63767,64017,65198,65729,70778,
#Partially deleted in new
chr17	59619923	59647502	chr17:59619923-59647502	0	+	59620131	59647502	789624	3	250,220,105,	0,24352,27474,
#Partially deleted in new
chr17	59619931	59694114	chr17:59619931-59694114	1	+	59620131	59693852	789624	14	242,208,50,111,165,108,168,150,132,111,171,222,76,387,	0,24344,27466,62386,62697,62975,63163,63455,63693,63943,65124,65655,70704,73796,
#Partially deleted in new
chr17	59619942	59651316	chr17:59619942-59651316	0	+	59620131	59648283	789624	4	231,208,162,114,	0,24333,28297,31260,
#Deleted in new
chr17	59647645	59648695	chr17:59647645-59648695	0	+	59647645	59647645	8553170	2	21,456,	0,594,
#Partially deleted in new
chr17	59648239	59656231	chr17:59648239-59656231	0	+	59648239	59648239	8553170	3	162,114,378,	0,2963,7614,
#Partially deleted in new
chr17	59655960	59663992	chr17:59655960-59663992	0	+	59655960	59658667	789624	5	67,143,198,201,151,	0,2701,4430,5482,7881,
#Partially deleted in new
chr17	59664689	59667066	chr17:59664689-59667066	0	+	59664689	59664689	8553170	4	220,138,165,270,	0,1413,1790,2107,
#Partially deleted in new
chr17	59670981	59677141	chr17:59670981-59677141	0	+	59670981	59670981	8553170	4	156,122,143,188,	0,2669,3719,5972,
#Partially deleted in new
chr17	59674635	59707415	chr17:59674635-59707415	0	-	59674635	59674635	8553170	3	186,178,45,	0,4731,32735,
#Deleted in new
chr17	59683713	59684509	chr17:59683713-59684509	0	+	59683713	59683713	8553170	2	43,635,	0,161,
#Partially deleted in new
chr17	59683905	59693822	chr17:59683905-59693822	0	+	59683905	59693822	789624	6	80,171,222,21,76,95,	0,1150,1681,3095,6730,9822,
#Deleted in new
chr17	59685116	59687147	chr17:59685116-59687147	0	+	59685116	59687063	789624	3	110,222,147,	0,470,1884,
#Partially deleted in new
chr17	59689155	59695112	chr17:59689155-59695112	0	+	59689155	59689155	8553170	2	1556,1385,	0,4572,
#Partially deleted in new
chr17	59697305	59707598	chr17:59697305-59707598	3	-	59697438	59697978	0	2	673,228,	0,10065,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	59697307	59707626	chr17:59697307-59707626	1	-	59697438	59698873	789624	3	671,1319,256,	0,1563,10063,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	59697311	59701425	chr17:59697311-59701425	1	-	59697438	59697978	0	1	4114,	0,
#Deleted in new
chr17	59707191	59707676	chr17:59707191-59707676	0	+	59707191	59707191	8553170	2	81,150,	0,335,
#Partially deleted in new
chr17	59707464	59841092	chr17:59707464-59841092	3	+	59731446	59839911	789624	12	284,102,136,91,111,168,132,81,117,62,103,1325,	0,23956,27873,29988,31372,57506,66289,101331,104205,110247,130830,132303,
#Partially deleted in new
chr17	59707647	59773804	chr17:59707647-59773804	0	+	59731446	59764983	789624	5	101,102,136,168,51,	0,23773,27690,57323,66106,
#Partially deleted in new
chr17	59707649	59765111	chr17:59707649-59765111	0	+	59731446	59737511	789624	5	99,102,91,111,141,	0,23771,29803,31187,57321,
#Partially deleted in new
chr17	59707650	59765068	chr17:59707650-59765068	0	+	59731446	59738852	789624	5	98,102,136,111,98,	0,23770,27687,31186,57320,
#Partially deleted in new
chr17	59707663	59773881	chr17:59707663-59773881	0	+	59765132	59773881	789624	5	85,91,111,168,128,	0,29789,31173,57307,66090,
#Partially deleted in new
chr17	59707670	59735744	chr17:59707670-59735744	0	+	59707670	59707670	8553170	3	78,102,407,	0,23750,27667,
#Partially deleted in new
chr17	59707695	59765138	chr17:59707695-59765138	0	+	59731446	59765138	789624	6	53,102,136,91,111,87,	0,23725,27642,29757,31141,57356,
#Partially deleted in new
chr17	59707705	59737474	chr17:59707705-59737474	0	+	59731446	59737474	789624	4	43,140,136,22,	0,23677,27632,29747,
#Partially deleted in new
chr17	59707717	59738947	chr17:59707717-59738947	0	+	59731446	59738947	789624	5	360,102,136,91,111,	0,23703,27620,29735,31119,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	59729714	59737517	chr17:59729714-59737517	0	+	59731446	59737517	789624	4	303,102,136,65,	0,1706,5623,7738,
#Partially deleted in new
chr17	59735337	59840106	chr17:59735337-59840106	0	+	59735337	59808835	789624	6	136,81,117,62,103,339,	0,73458,76332,82374,102957,104430,
#Deleted in new
chr17	59784812	59785035	chr17:59784812-59785035	3	+	59784812	59784812	8553170	1	223,	0,
#Partially deleted in new
chr17	59837627	59840223	chr17:59837627-59840223	0	+	59837627	59837627	8553170	3	170,103,456,	0,667,2140,
#Partially deleted in new
chr17	59837854	59840207	chr17:59837854-59840207	0	+	59837854	59837854	8553170	3	358,86,440,	0,457,1913,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	59837930	59842255	chr17:59837930-59842255	0	+	59837930	59837930	8553170	1	4325,	0,
#Partially deleted in new
chr17	59837950	59840315	chr17:59837950-59840315	0	+	59837950	59837950	8553170	2	447,548,	0,1817,
#Deleted in new
chr17	59841265	59841337	chr17:59841265-59841337	3	+	59841265	59841265	789624	1	72,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	59847437	59847544	chr17:59847437-59847544	3	-	59847437	59847437	8553170	1	107,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	59859481	59892945	chr17:59859481-59892945	3	-	59860321	59891002	789624	9	943,184,141,165,232,217,148,211,249,	0,4182,7127,15057,18621,21412,26601,31349,33215,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	59859481	59892945	chr17:59859481-59892945	1	-	59860321	59891002	789624	7	943,184,232,217,148,211,249,	0,4182,18621,21412,26601,31349,33215,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	59859489	59892715	chr17:59859489-59892715	1	-	59860321	59891002	789624	5	935,184,141,211,19,	0,4174,7119,31341,33207,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	59860012	59892920	chr17:59860012-59892920	1	-	59860321	59891002	789624	8	412,184,141,232,217,148,211,224,	0,3651,6596,18090,20881,26070,30818,32684,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	59860033	59892858	chr17:59860033-59892858	1	-	59860321	59891002	789624	8	391,154,165,232,217,148,211,162,	0,6562,14505,18069,20860,26049,30797,32663,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	59860224	59891003	chr17:59860224-59891003	1	-	59860321	59891002	789624	6	200,184,232,217,148,173,	0,3439,17878,20669,25858,30606,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	59860224	59891003	chr17:59860224-59891003	1	-	59860321	59891002	789624	8	200,184,141,165,232,217,148,173,	0,3439,6384,14314,17878,20669,25858,30606,
#Partially deleted in new
chr17	59860316	59892893	chr17:59860316-59892893	1	-	59860321	59878223	789624	6	108,184,141,165,232,197,	0,3347,6292,14222,17786,32380,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	59860321	59892941	chr17:59860321-59892941	0	-	59884698	59891002	789624	9	103,184,141,232,217,96,148,211,245,	0,3342,6287,17781,20572,24339,25761,30509,32375,
#Partially deleted in new
chr17	59863663	59881148	chr17:59863663-59881148	0	-	59863663	59863663	8553170	4	184,141,232,255,	0,2945,14439,17230,
#Partially deleted in new
chr17	59863782	59892893	chr17:59863782-59892893	0	-	59866742	59886201	789624	4	65,141,148,197,	0,2826,22300,28914,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	59874538	59878762	chr17:59874538-59878762	0	-	59874538	59874538	8553170	2	165,660,	0,3564,
#Partially deleted in new
chr17	59878300	59892899	chr17:59878300-59892899	0	-	59878300	59878300	8553170	4	34,148,211,203,	0,7782,12530,14396,
#Partially deleted in new
chr17	59880937	59892935	chr17:59880937-59892935	0	-	59880937	59886201	789624	3	173,148,239,	0,5145,11759,
#Partially deleted in new
chr17	59885014	59885552	chr17:59885014-59885552	7	+	59885014	59885014	16724991	1	538,	0,
#Partially deleted in new
chr17	59893045	59950421	chr17:59893045-59950421	1	+	59910579	59946788	0	16	280,129,50,121,69,148,58,101,91,91,108,63,78,108,113,3871,	0,750,17516,19638,21589,33389,37071,38576,41124,41388,42147,43169,43418,47790,52360,53505,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	59893085	59947461	chr17:59893085-59947461	0	+	59893184	59926457	789624	15	240,50,121,69,167,58,253,101,91,91,108,327,108,113,911,	0,17476,19598,21549,33330,37031,37714,38536,41084,41348,42107,43129,47750,52320,53465,
#Partially deleted in new
chr17	59893129	59947137	chr17:59893129-59947137	1	+	59893184	59946788	0	14	196,50,121,148,58,101,91,91,108,63,78,108,113,587,	0,17432,19554,33305,36987,38492,41040,41304,42063,43085,43334,47706,52276,53421,
#Partially deleted in new
chr17	59893137	59931692	chr17:59893137-59931692	0	+	59893184	59893813	789624	9	188,129,50,121,69,148,58,75,71,	0,658,17424,19546,21497,33297,36979,37220,38484,
#Partially deleted in new
chr17	59893144	59948188	chr17:59893144-59948188	1	+	59893184	59947602	0	15	181,50,121,69,148,58,101,91,91,108,63,78,108,113,602,	0,17417,19539,21490,33290,36972,38477,41025,41289,42048,43070,43319,47691,52261,54442,
#Partially deleted in new
chr17	59893163	59950564	chr17:59893163-59950564	3	+	59893184	59946788	0	15	162,50,121,69,148,58,101,91,91,108,63,78,108,113,4014,	0,17398,19520,21471,33271,36953,38458,41006,41270,42029,43051,43300,47672,52242,53387,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	59906987	59914668	chr17:59906987-59914668	0	+	59910579	59914668	789624	4	417,50,121,34,	0,3574,5696,7647,
#Partially deleted in new
chr17	59912196	59912366	chr17:59912196-59912366	7	+	59912196	59912196	16724991	1	170,	0,
#Partially deleted in new
chr17	59931319	59934522	chr17:59931319-59934522	0	+	59931319	59931319	8553170	3	403,91,89,	0,2850,3114,
#Deleted in new
chr17	59934144	59935037	chr17:59934144-59935037	0	+	59934144	59934144	8553170	2	116,604,	0,289,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	59940907	59973101	chr17:59940907-59973101	3	+	59940907	59966418	789624	4	36,113,65,267,	0,4498,25495,31927,
#Deleted in new
chr17	59945190	59946941	chr17:59945190-59946941	0	+	59945190	59945190	8553170	2	328,391,	0,1360,
#Deleted in new
chr17	59947577	59950420	chr17:59947577-59950420	0	+	59947577	59947577	8553170	2	303,261,	0,2582,
#Partially deleted in new
chr17	59952239	59964719	chr17:59952239-59964719	3	-	59952976	59964663	789624	9	872,102,66,159,154,101,77,458,112,	0,1805,4248,4984,6051,7828,10300,10587,12368,
#Partially deleted in new
chr17	59952361	59964734	chr17:59952361-59964734	0	-	59958297	59964663	789624	8	750,102,66,159,154,77,458,127,	0,1683,4126,4862,5929,10178,10465,12246,
#Partially deleted in new
chr17	59952395	59964761	chr17:59952395-59964761	0	-	59958439	59964663	789624	7	716,102,66,159,154,458,154,	0,1649,4092,4828,5895,10431,12212,
#Partially deleted in new
chr17	59953948	59958637	chr17:59953948-59958637	0	-	59953948	59953948	8553170	4	198,66,159,347,	0,2539,3275,4342,
#Partially deleted in new
chr17	59956487	59962599	chr17:59956487-59962599	0	-	59958647	59962599	789624	6	66,159,154,78,101,60,	0,736,1803,2136,3580,6052,
#Partially deleted in new
chr17	59958362	59964734	chr17:59958362-59964734	0	-	59958362	59964663	789624	5	82,101,77,353,127,	0,1705,4177,4569,6245,
#Partially deleted in new
chr17	59958433	59962966	chr17:59958433-59962966	0	-	59958433	59958433	8553170	4	268,101,77,140,	0,1634,4106,4393,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	59959383	59964712	chr17:59959383-59964712	0	-	59959383	59959383	8553170	4	785,77,458,105,	0,3156,3443,5224,
#Deleted in new
chr17	59962320	59964737	chr17:59962320-59964737	0	-	59962320	59962320	8553170	3	296,458,130,	0,506,2287,
#Partially deleted in new
chr17	59962362	60018975	chr17:59962362-60018975	3	-	59962362	59962362	789624	14	254,458,109,115,158,81,87,100,67,75,120,110,73,34,	0,464,13661,14293,25084,26901,33590,35775,38867,39307,39885,51937,55064,56579,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	59964831	59973104	chr17:59964831-59973104	1	+	59964831	59964831	789624	3	357,65,270,	0,1571,8003,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	59965095	59996972	chr17:59965095-59996972	3	+	59965095	59965095	789624	4	93,65,92,1353,	0,1307,27792,30524,
#Partially deleted in new
chr17	59976008	60002384	chr17:59976008-60002384	7	-	59976008	59976008	16724991	11	124,115,158,81,183,87,100,132,67,228,137,	0,647,11438,13255,19623,19944,22129,24022,25221,25508,26239,
#Deleted in new
chr17	60008436	60017498	chr17:60008436-60017498	7	-	60008436	60008436	16724991	13	612,153,100,66,95,121,49,110,108,81,40,86,72,	0,1593,2116,2683,3133,3942,4606,5863,6303,6854,7417,8742,8990,
#Deleted in new
chr17	60021071	60022436	chr17:60021071-60022436	7	+	60021071	60021071	16724991	2	183,238,	0,1127,
#Partially deleted in new
chr17	60025858	60030746	chr17:60025858-60030746	7	+	60025858	60025858	16724991	2	341,75,	0,4813,
#Deleted in new
chr17	60043024	60043105	chr17:60043024-60043105	3	-	60043024	60043024	5263520	1	81,	0,
#Partially deleted in new
chr17	60043193	60078931	chr17:60043193-60078931	3	-	60043562	60078914	789624	20	941,205,97,125,123,135,87,123,356,100,207,178,299,138,102,115,116,141,108,236,	0,2831,4115,5070,6386,7649,12321,12921,13854,16228,16696,23015,24240,26517,27512,29021,29970,30552,32936,35502,
#Partially deleted in new
chr17	60043491	60078921	chr17:60043491-60078921	1	-	60043562	60078914	789624	18	643,205,97,125,123,18,347,100,207,178,299,138,102,115,116,141,108,226,	0,2533,3817,4772,6088,7351,13565,15930,16398,22717,23942,26219,27214,28723,29672,30254,32638,35204,
#Partially deleted in new
chr17	60043491	60078921	chr17:60043491-60078921	1	-	60043562	60073755	789624	18	643,205,97,125,123,20,345,100,207,178,299,138,102,115,118,138,108,226,	0,2533,3817,4772,6088,7351,13567,15930,16398,22717,23942,26219,27214,28723,29672,30257,32638,35204,
#Partially deleted in new
chr17	60043562	60078921	chr17:60043562-60078921	0	-	60066395	60078914	789624	20	572,205,97,125,123,135,87,123,356,100,207,188,302,138,102,115,116,141,108,226,	0,2462,3746,4701,6017,7280,11952,12552,13485,15859,16327,22646,23868,26148,27143,28652,29601,30183,32567,35133,
#Deleted in new
chr17	60043672	60048316	chr17:60043672-60048316	0	-	60046087	60048316	789624	4	462,75,97,53,	0,2352,3636,4591,
#Partially deleted in new
chr17	60047363	60055598	chr17:60047363-60055598	0	-	60048348	60055598	789624	5	42,106,123,135,84,	0,900,2216,3479,8151,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	60063003	60064782	chr17:60063003-60064782	7	-	60063003	60063003	16724991	2	1013,434,	0,1345,
#Partially deleted in new
chr17	60069808	60076185	chr17:60069808-60076185	0	-	60074141	60076185	789624	6	40,102,115,116,414,56,	0,897,2406,3355,3937,6321,
#Partially deleted in new
chr17	60072220	60078912	chr17:60072220-60078912	0	-	60072220	60078912	789624	4	109,116,108,217,	0,943,3909,6475,
#Partially deleted in new
chr17	60073845	60078921	chr17:60073845-60078921	0	-	60074141	60078914	789624	4	41,198,108,226,	0,116,2284,4850,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	60075614	60078921	chr17:60075614-60078921	0	-	60075614	60075614	8553170	3	219,108,226,	0,515,3081,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	60076272	60078922	chr17:60076272-60078922	0	-	60076272	60076272	8553170	2	429,227,	0,2423,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	60079308	60088695	chr17:60079308-60088695	3	+	60079308	60079308	789624	2	164,535,	0,8852,
#Partially deleted in new
chr17	60083565	60088293	chr17:60083565-60088293	5	-	60083565	60083565	16724991	3	201,149,97,	0,1489,4631,
#Partially deleted in new
chr17	60083565	60088256	chr17:60083565-60088256	5	-	60083565	60083565	16724991	4	201,149,195,60,	0,1489,2366,4631,
#Partially deleted in new
chr17	60083565	60088257	chr17:60083565-60088257	5	-	60083565	60083565	16724991	4	201,101,195,61,	0,1537,2366,4631,
#Partially deleted in new
chr17	60083565	60091885	chr17:60083565-60091885	7	-	60083565	60083565	16724991	5	201,91,148,105,85,	0,1547,2366,4631,8235,
#Partially deleted in new
chr17	60083566	60088315	chr17:60083566-60088315	4	-	60083566	60083566	16724991	4	200,101,54,119,	0,1536,2365,4630,
#Partially deleted in new
chr17	60083571	60088467	chr17:60083571-60088467	4	-	60083571	60083571	16724991	3	195,101,271,	0,1531,4625,
#Partially deleted in new
chr17	60083571	60088313	chr17:60083571-60088313	4	-	60083571	60083571	16724991	4	195,101,148,117,	0,1531,2360,4625,
#Partially deleted in new
chr17	60083599	60085401	chr17:60083599-60085401	4	-	60083599	60083599	16724991	2	167,299,	0,1503,
#Partially deleted in new
chr17	60085108	60088286	chr17:60085108-60088286	5	-	60085108	60085108	16724991	2	95,90,	0,3088,
#Deleted in new
chr17	60101758	60102919	chr17:60101758-60102919	7	-	60101758	60101758	16724991	1	1161,	0,
#Deleted in new
chr17	60102224	60102662	chr17:60102224-60102662	5	-	60102224	60102224	16724991	1	438,	0,
#Partially deleted in new
chr17	60113792	60120687	chr17:60113792-60120687	7	-	60113792	60113792	16724991	3	100,152,317,	0,2007,6578,
#Deleted in new
chr17	60124109	60125474	chr17:60124109-60125474	7	-	60124109	60124109	16724991	2	238,183,	0,1182,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	60126534	60134998	chr17:60126534-60134998	3	-	60126534	60126534	8553170	4	331,135,77,243,	0,2421,5901,8221,
#Deleted in new
chr17	60134621	60135644	chr17:60134621-60135644	0	-	60134621	60134621	8553170	1	1023,	0,
#Partially deleted in new
chr17	60135761	60140081	chr17:60135761-60140081	3	-	60135761	60135761	8553170	2	466,76,	0,4244,
#Partially deleted in new
chr17	60149935	60159540	chr17:60149935-60159540	3	+	60150034	60159424	0	8	157,54,156,146,99,67,164,311,	0,5378,6624,7491,7754,8125,8347,9294,
#Partially deleted in new
chr17	60149941	60156952	chr17:60149941-60156952	0	+	60149941	60149941	8553170	3	151,54,393,	0,5372,6618,
#Partially deleted in new
chr17	60149941	60170899	chr17:60149941-60170899	0	+	60150034	60158113	0	6	151,54,156,67,164,349,	0,5372,6618,8119,8341,20609,
#Partially deleted in new
chr17	60149941	60157542	chr17:60149941-60157542	0	+	60157428	60157542	789624	5	151,88,54,156,116,	0,1500,5372,6618,7485,
#Partially deleted in new
chr17	60157731	60159546	chr17:60157731-60159546	0	+	60157731	60159424	789624	4	57,139,164,317,	0,257,551,1498,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	60158107	60158964	chr17:60158107-60158964	0	+	60158107	60158560	789624	2	20,682,	0,175,
#Partially deleted in new
chr17	60179093	60392134	chr17:60179093-60392134	3	-	60179254	60391939	789624	34	335,93,425,289,192,121,87,185,212,112,152,175,174,106,139,75,82,155,118,141,176,193,103,62,84,63,116,108,132,160,119,106,128,253,	0,1451,2230,4071,6366,11469,13750,19166,26353,27927,28965,29560,30276,31919,32282,32930,34487,35526,40576,43315,44317,46945,57044,73287,76081,86318,86882,90356,92256,109429,115589,122505,166387,212788,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr17	60179104	60256700	chr17:60179104-60256700	1	-	60179254	60255258	789624	26	324,93,425,289,192,121,87,185,212,112,152,175,174,106,139,75,82,155,118,141,176,193,103,62,84,70,	0,1440,2219,4060,6355,11458,13739,19155,26342,27916,28954,29549,30265,31908,32271,32919,34476,35515,40565,43304,44306,46934,57033,73276,76070,77526,
#Partially deleted in new
chr17	60179110	60181673	chr17:60179110-60181673	0	-	60179254	60181673	789624	2	318,350,	0,2213,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	60183185	60185933	chr17:60183185-60185933	0	-	60183185	60183185	8553170	2	268,474,	0,2274,
#Deleted in new
chr17	60207728	60208813	chr17:60207728-60208813	0	-	60207728	60207728	8553170	2	482,160,	0,925,
#Partially deleted in new
chr17	60209416	60392408	chr17:60209416-60392408	0	-	60209416	60392387	789624	22	127,106,139,75,82,155,118,141,176,193,103,62,84,63,116,108,132,160,119,106,128,70,	0,1596,1959,2607,4164,5203,10253,12992,13994,16622,26721,42964,45758,55995,56559,60033,61933,79106,85266,92182,136064,182922,
#Partially deleted in new
chr17	60213580	60226063	chr17:60213580-60226063	0	-	60213580	60226063	789624	6	82,155,160,141,176,25,	0,1039,6047,8828,9830,12458,
#Partially deleted in new
chr17	60219570	60226149	chr17:60219570-60226149	0	-	60219570	60219570	8553170	4	217,141,176,111,	0,2838,3840,6468,
#Partially deleted in new
chr17	60219635	60226231	chr17:60219635-60226231	0	-	60222478	60226231	789624	3	152,141,193,	0,2773,6403,
#Partially deleted in new
chr17	60226182	60392230	chr17:60226182-60392230	0	-	60226182	60391939	789624	5	49,103,62,128,349,	0,9955,26198,119298,165699,
#Deleted in new
chr17	60231515	60231646	chr17:60231515-60231646	3	-	60231515	60231515	789624	1	131,	0,
#Deleted in new
chr17	60245287	60245647	chr17:60245287-60245647	7	-	60245287	60245287	16724991	1	360,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	60249057	60391975	chr17:60249057-60391975	1	-	60249716	60391939	789624	12	696,62,84,63,116,108,132,160,119,106,128,94,	0,3323,6117,16354,16918,20392,22292,39465,45625,52541,96423,142824,
#Partially deleted in new
chr17	60256719	60258411	chr17:60256719-60258411	7	+	60256719	60256719	16724991	4	209,114,131,164,	0,243,1295,1528,
#Partially deleted in new
chr17	60294682	60422470	chr17:60294682-60422470	0	-	60294682	60422351	789624	4	119,106,128,225,	0,6916,50798,127563,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	60301449	60391928	chr17:60301449-60391928	0	-	60301449	60301449	8553170	3	255,128,47,	0,44031,90432,
#Deleted in new
chr17	60315833	60316215	chr17:60315833-60316215	7	+	60315833	60315833	16724991	1	382,	0,
#Partially deleted in new
chr17	60392428	60425871	chr17:60392428-60425871	0	+	60425842	60425871	789624	2	114,89,	0,33354,
#Partially deleted in new
chr17	60421207	60422337	chr17:60421207-60422337	0	-	60421381	60422337	789624	2	344,92,	0,1038,
#Partially deleted in new
chr17	60421741	60426794	chr17:60421741-60426794	0	+	60425842	60426794	789624	4	48,102,176,77,	0,4041,4419,4976,
#Partially deleted in new
chr17	60422508	60431421	chr17:60422508-60431421	3	+	60422592	60431266	789624	6	135,102,176,100,196,241,	0,3274,3652,4209,6853,8672,
#Partially deleted in new
chr17	60422534	60426408	chr17:60422534-60426408	0	+	60422534	60422534	8553170	3	109,102,248,	0,3248,3626,
#Partially deleted in new
chr17	60433677	60435996	chr17:60433677-60435996	7	-	60433677	60433677	16724991	1	2319,	0,
#Partially deleted in new
chr17	60433722	60434212	chr17:60433722-60434212	5	-	60433722	60433722	16724991	1	490,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	60443148	60526219	chr17:60443148-60526219	3	-	60447580	60525931	789624	13	4686,166,191,86,125,106,68,90,169,124,152,89,426,	0,8731,11153,13147,17514,18661,18845,20872,23142,35999,51317,57250,82645,
#Partially deleted in new
chr17	60447745	60526132	chr17:60447745-60526132	0	-	60494569	60525931	789624	12	89,166,191,86,125,106,68,90,169,124,152,339,	0,4134,6556,8550,12917,14064,14248,16275,18545,31402,46720,78048,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	60459506	60465161	chr17:60459506-60465161	0	-	60459506	60459506	8553170	2	3184,374,	0,5281,
#Partially deleted in new
chr17	60466350	60526098	chr17:60466350-60526098	0	-	60466350	60466350	8553170	7	109,72,38,124,152,89,305,	0,2088,11118,12797,28115,34048,59443,
#Partially deleted in new
chr17	60479161	60525938	chr17:60479161-60525938	0	-	60494585	60525931	789624	5	110,152,29,89,145,	0,15304,17251,21237,46632,
#Partially deleted in new
chr17	60494473	60526123	chr17:60494473-60526123	0	-	60494473	60525931	789624	4	144,89,168,46,	0,5925,31320,31604,
#Partially deleted in new
chr17	60513189	60513550	chr17:60513189-60513550	7	+	60513189	60513189	16724991	1	361,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	60526298	60550798	chr17:60526298-60550798	0	+	60526298	60526298	8553170	3	203,288,62,	0,22109,24438,
#Partially deleted in new
chr17	60562009	60562161	chr17:60562009-60562161	7	-	60562009	60562009	16724991	1	152,	0,
#Partially deleted in new
chr17	60564739	60565671	chr17:60564739-60565671	7	-	60564739	60564739	16724991	2	259,347,	0,585,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	60600182	60666280	chr17:60600182-60666280	3	+	60600414	60663552	789624	6	704,229,125,191,243,3286,	0,23338,33670,47709,56416,62812,
#Partially deleted in new
chr17	60600182	60656964	chr17:60600182-60656964	1	+	60600414	60656964	789624	6	704,229,125,191,243,33,	0,23338,33670,47709,56416,56749,
#Partially deleted in new
chr17	60600268	60664473	chr17:60600268-60664473	0	+	60600414	60656964	789624	7	618,229,125,191,243,111,1479,	0,23252,33584,47623,56330,56663,62726,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	60604593	60633957	chr17:60604593-60633957	0	+	60604705	60633957	789624	3	155,229,105,	0,18927,29259,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	60662332	60662437	chr17:60662332-60662437	3	-	60662332	60662332	8553170	1	105,	0,
#Partially deleted in new
chr17	60677452	60747282	chr17:60677452-60747282	0	+	60679457	60747282	789624	6	134,88,55,76,107,85,	0,2000,6529,12233,31766,69745,
#Partially deleted in new
chr17	60677847	60747279	chr17:60677847-60747279	0	+	60679457	60688964	789624	7	67,88,55,115,76,107,82,	0,1605,6134,11084,11838,31371,69350,
#Partially deleted in new
chr17	60677851	61392831	chr17:60677851-61392831	1	+	60679457	61392013	789624	26	63,88,55,76,107,82,73,108,77,77,84,171,94,134,265,151,125,166,101,101,197,98,168,66,91,855,	0,1601,6130,11834,31367,69346,130152,190724,196810,211843,224768,232680,246555,269367,312119,337899,356814,360037,362940,397068,400481,406615,690475,702654,710766,714125,
#Partially deleted in new
chr17	60677854	60688043	chr17:60677854-60688043	1	+	60679457	60688043	789624	4	60,88,55,24,	0,1598,6127,10165,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	60677865	60720356	chr17:60677865-60720356	0	+	60677865	60677865	8553170	6	49,88,55,76,107,197,	0,1587,6116,11820,31353,42294,
#Partially deleted in new
chr17	60677867	60808094	chr17:60677867-60808094	0	+	60677867	60677867	8553170	7	47,88,55,76,107,82,91,	0,1585,6114,11818,31351,69330,130136,
#Partially deleted in new
chr17	60677871	61392831	chr17:60677871-61392831	3	+	60679457	61392125	789624	24	43,88,55,76,107,82,73,108,77,77,84,171,94,134,265,151,125,166,101,101,197,98,168,855,	0,1581,6110,11814,31347,69326,130132,190704,196790,211823,224748,232660,246535,269347,312099,337879,356794,360017,362920,397048,400461,406595,690455,714105,
#Partially deleted in new
chr17	60677878	60709266	chr17:60677878-60709266	0	+	60679457	60688043	789624	7	36,88,55,176,115,76,48,	0,1574,6103,10141,11053,11807,31340,
#Partially deleted in new
chr17	60677886	60889742	chr17:60677886-60889742	0	+	60679457	60688043	789624	11	28,88,55,176,76,107,82,73,108,77,48,	0,1566,6095,10133,11799,31332,69311,130117,190689,196775,211808,
#Partially deleted in new
chr17	60677888	61392838	chr17:60677888-61392838	1	+	60679457	61392125	789624	25	26,88,55,76,107,82,73,108,77,77,84,171,94,134,265,151,45,125,166,101,101,197,98,168,862,	0,1564,6093,11797,31330,69309,130115,190687,196773,211806,224731,232643,246518,269330,312082,337862,348977,356777,360000,362903,397031,400444,406578,690438,714088,
#Partially deleted in new
chr17	60677891	60874738	chr17:60677891-60874738	0	+	60679457	60709246	789624	7	23,88,107,82,73,108,77,	0,1561,31327,69306,130112,190684,196770,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	60677891	60821775	chr17:60677891-60821775	0	+	60677891	60677891	8553170	8	23,88,55,76,107,82,73,65,	0,1561,6090,11794,31327,69306,130112,143819,
#Partially deleted in new
chr17	60679457	61392831	chr17:60679457-61392831	1	+	60679457	61392125	789624	24	83,55,76,107,82,73,108,77,77,84,171,94,134,265,151,125,166,101,101,197,98,168,66,855,	0,4524,10228,29761,67740,128546,189118,195204,210237,223162,231074,244949,267761,310513,336293,355208,358431,361334,395462,398875,405009,688869,701048,712519,
#Partially deleted in new
chr17	60679457	61392831	chr17:60679457-61392831	1	+	60679457	61392125	789624	25	83,55,76,107,82,73,108,77,77,84,171,94,134,265,151,45,125,166,101,101,197,98,168,66,855,	0,4524,10228,29761,67740,128546,189118,195204,210237,223162,231074,244949,267761,310513,336293,347408,355208,358431,361334,395462,398875,405009,688869,701048,712519,
#Partially deleted in new
chr17	60679457	60709243	chr17:60679457-60709243	1	+	60679457	60709243	789624	2	83,25,	0,29761,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	60696312	60696605	chr17:60696312-60696605	3	+	60696312	60696312	8553170	1	293,	0,
#Partially deleted in new
chr17	60727164	60727482	chr17:60727164-60727482	7	-	60727164	60727164	16724991	1	318,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	60748939	60749046	chr17:60748939-60749046	3	-	60748939	60748939	8553170	1	107,	0,
#Deleted in new
chr17	60810164	60811462	chr17:60810164-60811462	7	+	60810164	60810164	16724991	1	1298,	0,
#Partially deleted in new
chr17	60851381	60851745	chr17:60851381-60851745	7	+	60851381	60851381	16724991	1	364,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	60899890	60900185	chr17:60899890-60900185	3	+	60899890	60899890	8553170	1	295,	0,
#Partially deleted in new
chr17	60986856	61015785	chr17:60986856-61015785	0	+	60986856	60986856	8553170	3	286,265,35,	0,3114,28894,
#Partially deleted in new
chr17	61002556	61037903	chr17:61002556-61037903	0	+	61002556	61002556	8553170	5	171,90,151,125,15,	0,1243,13194,32109,35332,
#Partially deleted in new
chr17	61016961	61368342	chr17:61016961-61368342	0	+	61016961	61016961	8553170	8	115,125,166,101,101,197,98,16,	0,17704,20927,23830,57958,61371,67505,351365,
#Partially deleted in new
chr17	61016963	61074988	chr17:61016963-61074988	0	+	61016963	61016963	8553170	5	113,125,161,101,69,	0,17702,20925,23828,57956,
#Partially deleted in new
chr17	61034635	61070122	chr17:61034635-61070122	3	-	61034635	61034635	8553170	3	139,172,118,	0,1577,35369,
#Deleted in new
chr17	61069855	61070356	chr17:61069855-61070356	3	-	61069855	61069855	8553170	2	149,98,	0,403,
#Deleted in new
chr17	61069870	61070341	chr17:61069870-61070341	7	+	61069870	61069870	16724991	1	471,	0,
#Partially deleted in new
chr17	61078440	61368410	chr17:61078440-61368410	0	+	61078440	61368410	789624	5	89,98,141,138,84,	0,6026,275921,278408,289886,
#Partially deleted in new
chr17	61084504	61087498	chr17:61084504-61087498	0	+	61084504	61084504	8553170	2	60,351,	0,2643,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	61130703	61135964	chr17:61130703-61135964	3	-	61130703	61130703	8553170	2	188,98,	0,5163,
#Partially deleted in new
chr17	61157455	61392831	chr17:61157455-61392831	0	+	61157455	61157455	8553170	6	20,915,168,190,66,855,	0,196132,210871,221495,223050,234521,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	61159361	61392182	chr17:61159361-61392182	0	+	61159361	61159361	8553170	5	90,407,168,66,206,	0,208469,208965,221144,232615,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	61245259	61392273	chr17:61245259-61392273	0	+	61245259	61245259	8553170	6	112,141,168,66,91,297,	0,109102,123067,135246,143358,146717,
#Deleted in new
chr17	61354762	61355155	chr17:61354762-61355155	3	-	61354762	61354762	8553170	1	393,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	61361667	61400243	chr17:61361667-61400243	3	-	61361667	61361667	789624	4	190,73,179,28,	0,1065,5858,38548,
#Deleted in new
chr17	61377829	61380572	chr17:61377829-61380572	0	+	61377829	61377829	8553170	1	2743,	0,
#Deleted in new
chr17	61382784	61383555	chr17:61382784-61383555	1	+	61382784	61382784	8553170	2	612,60,	0,711,
#Deleted in new
chr17	61383400	61384680	chr17:61383400-61384680	3	+	61383400	61383400	8553170	3	154,285,277,	0,260,1003,
#Deleted in new
chr17	61388275	61392831	chr17:61388275-61392831	0	+	61388275	61388275	8553170	1	4556,	0,
#Deleted in new
chr17	61393455	61394062	chr17:61393455-61394062	0	-	61393455	61393455	8553170	2	292,118,	0,489,
#Partially deleted in new
chr17	61393456	61399606	chr17:61393456-61399606	1	-	61393456	61393456	789624	2	291,570,	0,5580,
#Partially deleted in new
chr17	61393457	61395447	chr17:61393457-61395447	0	-	61393457	61393457	8553170	3	290,117,69,	0,1164,1921,
#Partially deleted in new
chr17	61393457	61399370	chr17:61393457-61399370	1	-	61393457	61393457	789624	3	290,117,132,	0,1164,5781,
#Partially deleted in new
chr17	61393457	61399588	chr17:61393457-61399588	0	-	61393457	61393457	789624	2	290,350,	0,5781,
#Partially deleted in new
chr17	61393457	61411555	chr17:61393457-61411555	2	-	61393457	61393457	8553170	2	290,40,	0,18058,
#Deleted in new
chr17	61399895	61409425	chr17:61399895-61409425	3	+	61400176	61408506	789624	7	676,268,147,77,164,635,1372,	0,1788,3165,4525,4710,5306,8158,
#Deleted in new
chr17	61399909	61409466	chr17:61399909-61409466	0	+	61400176	61401751	789624	7	662,246,147,77,164,635,1413,	0,1796,3151,4511,4696,5292,8144,
#Deleted in new
chr17	61400364	61409124	chr17:61400364-61409124	0	+	61400364	61400364	8553170	5	207,268,147,77,4519,	0,1319,2696,4056,4241,
#Deleted in new
chr17	61408721	61409466	chr17:61408721-61409466	0	+	61408721	61408721	8553170	2	120,209,	0,536,
#Deleted in new
chr17	61411750	61413280	chr17:61411750-61413280	3	+	61411750	61411750	8553170	1	1530,	0,
#Partially deleted in new
chr17	61452403	61478740	chr17:61452403-61478740	0	+	61457608	61478740	789624	6	54,53,95,120,148,114,	0,4220,5133,13415,15106,26223,
#Partially deleted in new
chr17	61452417	61485110	chr17:61452417-61485110	1	+	61456490	61483516	789624	9	160,189,95,120,148,153,89,230,2214,	0,4070,5119,13401,15092,26209,27463,27672,30479,
#Partially deleted in new
chr17	61452421	61485110	chr17:61452421-61485110	1	+	61456490	61483516	789624	9	156,189,95,120,148,153,89,230,2214,	0,4066,5115,13397,15088,26205,27459,27668,30475,
#Partially deleted in new
chr17	61456445	61484303	chr17:61456445-61484303	3	+	61456490	61483516	789624	8	231,95,120,148,153,89,230,1404,	0,1091,9373,11064,22181,23435,23644,26454,
#Partially deleted in new
chr17	61456463	61483997	chr17:61456463-61483997	1	+	61456490	61483516	789624	8	213,95,120,148,153,89,230,1101,	0,1073,9355,11046,22163,23417,23626,26433,
#Deleted in new
chr17	61460223	61463384	chr17:61460223-61463384	3	-	61460223	61460223	8553170	2	46,506,	0,2655,
#Partially deleted in new
chr17	61464213	61478789	chr17:61464213-61478789	0	+	61464213	61464213	8553170	4	198,120,148,163,	0,1605,3296,14413,
#Partially deleted in new
chr17	61465792	61480275	chr17:61465792-61480275	0	+	61465792	61465792	8553170	5	146,148,153,89,186,	0,1717,12834,14088,14297,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	61478350	61483370	chr17:61478350-61483370	0	+	61478350	61478350	8553170	8	79,153,89,230,131,98,156,225,	0,276,1530,1739,2974,3461,4546,4795,
#Partially deleted in new
chr17	61590425	61591202	chr17:61590425-61591202	3	-	61590532	61591180	789624	1	777,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr17	61681265	61863521	chr17:61681265-61863521	3	-	61683295	61861539	789624	20	2875,330,83,113,122,160,162,141,166,155,133,200,222,291,120,128,174,112,123,238,	0,4570,12164,34685,61747,63166,95135,98995,99574,103004,112331,117834,119987,127201,165835,167863,175792,178530,180181,182018,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr17	61684771	61861539	chr17:61684771-61861539	1	-	61685755	61861539	789624	18	1394,83,113,122,160,162,141,166,155,133,200,222,291,120,128,174,112,93,	0,8658,31179,58241,59660,91629,95489,96068,99498,108825,114328,116481,123695,162329,164357,172286,175024,176675,
#Partially deleted in new
chr17	61739056	61776480	chr17:61739056-61776480	0	-	61739230	61776480	789624	4	354,122,160,80,	0,3956,5375,37344,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	61775877	61780277	chr17:61775877-61780277	0	-	61775877	61775877	8553170	3	270,162,17,	0,523,4383,
#Partially deleted in new
chr17	61857227	61863344	chr17:61857227-61863344	0	-	61857227	61861539	789624	5	4,112,123,166,61,	0,2568,4219,4682,6056,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr17	61865366	61927105	chr17:61865366-61927105	1	-	61867556	61927105	789624	25	2360,177,106,108,252,196,126,202,165,105,109,177,135,69,115,72,126,227,174,131,114,103,139,311,6,	0,2466,3667,3906,4370,6898,9546,12520,15640,19534,24419,26146,28398,29948,32102,32301,39093,42041,46153,46573,54033,56358,59594,60985,61733,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr17	61865369	61928016	chr17:61865369-61928016	3	-	61867556	61927940	789624	25	2357,177,106,108,252,196,126,202,165,105,109,177,135,69,115,72,126,227,174,131,114,103,139,311,82,	0,2463,3664,3903,4367,6895,9543,12517,15637,19531,24416,26143,28395,29945,32099,32298,39090,42038,46150,46570,54030,56355,59591,60982,62565,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr17	61865389	61927982	chr17:61865389-61927982	0	-	61921277	61926644	789624	26	2337,177,106,108,252,196,126,202,165,105,109,177,135,69,115,72,126,227,174,131,114,121,103,139,311,329,	0,2443,3644,3883,4347,6875,9523,12497,15617,19511,24396,26123,28375,29925,32079,32278,39070,42018,46130,46550,54010,55832,56335,59571,60962,62264,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr17	61865389	61927982	chr17:61865389-61927982	1	-	61867556	61926644	789624	25	2337,177,106,108,252,196,126,202,165,105,109,177,135,69,115,72,126,227,174,131,114,103,139,311,61,	0,2443,3644,3883,4347,6875,9523,12497,15617,19511,24396,26123,28375,29925,32079,32278,39070,42018,46130,46550,54010,56335,59571,60962,62532,
#Partially deleted in new
chr17	61867248	61927991	chr17:61867248-61927991	1	-	61867556	61926644	789624	25	478,177,106,108,252,196,126,202,165,105,109,177,135,69,115,72,126,227,174,131,114,103,139,311,338,	0,584,1785,2024,2488,5016,7664,10638,13758,17652,22537,24264,26516,28066,30220,30419,37211,40159,44271,44691,52151,54476,57712,59103,60405,
#Partially deleted in new
chr17	61872022	61885005	chr17:61872022-61885005	0	-	61872022	61872022	8553170	5	438,126,202,165,105,	0,2890,5864,8984,12878,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	61874083	61874182	chr17:61874083-61874182	3	-	61874083	61874083	8553170	1	99,	0,
#Partially deleted in new
chr17	61877980	61885290	chr17:61877980-61885290	0	-	61877980	61877980	8553170	3	108,165,390,	0,3026,6920,
#Partially deleted in new
chr17	61891576	61894186	chr17:61891576-61894186	0	-	61891576	61891576	8553170	2	113,422,	0,2188,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	61910151	61927977	chr17:61910151-61927977	1	-	61911474	61926644	789624	7	1542,131,114,103,139,311,56,	0,1788,9248,11573,14809,16200,17770,
#Deleted in new
chr17	61926407	61927426	chr17:61926407-61927426	0	-	61926407	61926644	789624	2	255,156,	0,863,
#Partially deleted in new
chr17	61942604	62065282	chr17:61942604-62065282	3	-	61946467	62065205	789624	30	3996,101,174,149,186,159,143,224,192,220,463,190,224,162,917,197,215,91,122,82,214,684,111,163,195,198,146,169,235,143,	0,4312,8220,10360,12777,13075,13734,18262,18983,20147,22401,23857,25430,30122,39593,41566,42046,42395,44402,49935,52547,67945,86936,87246,88839,91182,92858,109932,120462,122535,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	61955310	61955763	chr17:61955310-61955763	0	-	61955310	61955310	8553170	2	257,84,	0,369,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	62003699	62007518	chr17:62003699-62007518	3	-	62003699	62003699	8553170	1	3819,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	62005736	62006016	chr17:62005736-62006016	3	-	62005736	62005736	8553170	1	280,	0,
#Partially deleted in new
chr17	62010426	62030000	chr17:62010426-62030000	0	-	62010512	62030000	789624	3	807,111,150,	0,19114,19424,
#Deleted in new
chr17	62029276	62031489	chr17:62029276-62031489	0	-	62029276	62029276	8553170	1	2213,	0,
#Partially deleted in new
chr17	62029297	62033825	chr17:62029297-62033825	0	-	62029297	62029297	8553170	4	354,163,195,39,	0,553,2146,4489,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	62035943	62040352	chr17:62035943-62040352	3	+	62035943	62035943	8553170	2	1039,387,	0,4022,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	62036832	62036945	chr17:62036832-62036945	3	+	62036832	62036832	8553170	1	113,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	62122319	62122421	chr17:62122319-62122421	3	+	62122319	62122319	8553170	1	102,	0,
#Deleted in new
chr17	62136971	62140639	chr17:62136971-62140639	7	-	62136971	62136971	16724991	1	3668,	0,
#Partially deleted in new
chr17	62231469	62247153	chr17:62231469-62247153	7	-	62231469	62231469	16724991	9	108,78,60,108,91,91,101,58,148,	0,5330,5593,6539,7317,7577,10066,11599,15536,
#Deleted in new
chr17	62260633	62261936	chr17:62260633-62261936	7	+	62260633	62260633	16724991	2	140,76,	0,1227,
#Deleted in new
chr17	62264704	62275627	chr17:62264704-62275627	7	-	62264704	62264704	16724991	14	924,153,99,66,95,121,49,110,108,81,40,86,73,83,	0,1905,2428,2990,3440,4248,4912,6212,6652,7203,7766,9091,9339,10840,
#Deleted in new
chr17	62265016	62274115	chr17:62265016-62274115	5	-	62265016	62265016	16724991	13	612,153,99,66,95,121,49,110,108,81,40,86,72,	0,1593,2116,2678,3128,3936,4600,5900,6340,6891,7454,8779,9027,
#Deleted in new
chr17	62265254	62275655	chr17:62265254-62275655	5	-	62265254	62265254	16724991	14	374,153,99,66,95,121,49,57,108,81,40,86,73,111,	0,1355,1878,2440,2890,3698,4362,5715,6102,6653,7216,8541,8789,10290,
#Partially deleted in new
chr17	62282701	62297026	chr17:62282701-62297026	7	-	62282701	62282701	16724991	11	212,112,152,175,174,106,139,75,82,155,118,	0,1575,2617,3212,3928,5585,5948,6588,8149,9177,14207,
#Deleted in new
chr17	62319883	62320189	chr17:62319883-62320189	7	+	62319883	62319883	16724991	1	306,	0,
#Partially deleted in new
chr17	62355863	62416476	chr17:62355863-62416476	0	+	62355863	62355863	8553170	14	105,54,104,54,51,91,77,144,72,121,194,185,123,474,	0,13307,14355,17950,22104,27099,31476,35958,37709,39204,50616,51164,57868,60139,
#Partially deleted in new
chr17	62370217	62416479	chr17:62370217-62416479	1	+	62370288	62416329	789624	12	105,54,51,91,77,144,72,121,194,185,123,477,	0,3596,7750,12745,17122,21604,23355,24850,36262,36810,43514,45785,
#Partially deleted in new
chr17	62380552	62416476	chr17:62380552-62416476	3	+	62382979	62416329	789624	10	61,91,77,144,72,121,194,185,123,474,	0,2410,6787,11269,13020,14515,25927,26475,33179,35450,
#Partially deleted in new
chr17	62380555	62406514	chr17:62380555-62406514	0	+	62382979	62406514	789624	7	34,91,77,144,72,121,35,	0,2407,6784,11266,13017,14512,25924,
#Partially deleted in new
chr17	62380582	62395188	chr17:62380582-62395188	0	+	62382979	62395188	789624	6	209,87,77,144,72,121,	0,2384,6757,11239,12990,14485,
#Partially deleted in new
chr17	62381667	62382015	chr17:62381667-62382015	7	+	62381667	62381667	16724991	1	348,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	62383103	62383166	chr17:62383103-62383166	3	+	62383103	62383103	8553170	1	63,	0,
#Partially deleted in new
chr17	62397396	62398142	chr17:62397396-62398142	7	+	62397396	62397396	16724991	2	348,96,	0,650,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	62423866	62450093	chr17:62423866-62450093	3	+	62423902	62448729	789624	9	146,92,356,50,61,140,107,66,1519,	0,352,2432,3921,11365,16750,20970,23834,24708,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	62423874	62448914	chr17:62423874-62448914	0	+	62423874	62423874	8553170	8	436,356,50,61,140,107,66,340,	0,2424,3913,11357,16742,20962,23826,24700,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	62423890	62450822	chr17:62423890-62450822	1	+	62424005	62448729	789624	8	122,356,50,61,140,107,66,2248,	0,2408,3897,11341,16726,20946,23810,24684,
#Partially deleted in new
chr17	62434860	62440756	chr17:62434860-62440756	0	+	62434860	62434860	8553170	2	432,140,	0,5756,
#Partially deleted in new
chr17	62458657	62613664	chr17:62458657-62613664	1	+	62536253	62612565	789624	23	108,83,146,72,70,44,96,168,96,93,111,137,153,67,98,82,92,90,170,139,112,108,1273,	0,22466,49750,62115,63546,64476,65578,77512,93644,95005,101358,106343,114557,118051,119819,121453,127477,137927,141993,143384,147472,149383,153734,
#Partially deleted in new
chr17	62470932	62552339	chr17:62470932-62552339	0	+	62536253	62552339	789624	8	146,83,146,72,70,44,168,38,	0,10191,37475,49840,51271,52201,65237,81369,
#Partially deleted in new
chr17	62470941	62522268	chr17:62470941-62522268	0	+	62481125	62522268	789624	5	137,202,83,72,65,	0,6554,10182,49831,51262,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	62470958	62508511	chr17:62470958-62508511	0	+	62470958	62470958	8553170	5	120,202,83,69,104,	0,6537,10165,36422,37449,
#Partially deleted in new
chr17	62477838	62523177	chr17:62477838-62523177	0	+	62481125	62523177	789624	5	243,83,72,70,44,	0,3285,42934,44365,45295,
#Partially deleted in new
chr17	62478065	62560034	chr17:62478065-62560034	0	+	62481125	62560034	789624	7	16,86,72,168,96,93,19,	0,3055,42707,58104,74236,75597,81950,
#Partially deleted in new
chr17	62479024	62613490	chr17:62479024-62613490	1	+	62481125	62612565	0	23	266,83,72,70,44,96,168,96,93,111,137,153,66,67,98,82,92,90,170,139,112,108,1099,	0,2099,41748,43179,44109,45211,57145,73277,74638,80991,85976,94190,95320,97684,99452,101086,107110,117560,121626,123017,127105,129016,133367,
#Partially deleted in new
chr17	62479024	62613490	chr17:62479024-62613490	3	+	62481125	62612565	0	22	266,86,72,70,44,96,168,96,93,111,137,153,67,98,82,92,90,170,139,112,108,1099,	0,2096,41748,43179,44109,45211,57145,73277,74638,80991,85976,94190,97684,99452,101086,107110,117560,121626,123017,127105,129016,133367,
#Partially deleted in new
chr17	62479149	62613489	chr17:62479149-62613489	1	+	62481125	62612565	0	21	141,86,72,70,44,168,96,93,111,137,153,67,98,82,92,90,170,139,112,108,1098,	0,1971,41623,43054,43984,57020,73152,74513,80866,85851,94065,97559,99327,100961,106985,117435,121501,122892,126980,128891,133242,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	62479245	62523141	chr17:62479245-62523141	0	+	62481128	62508416	789624	7	45,86,69,146,72,70,8,	0,1875,28135,29162,41527,42958,43888,
#Partially deleted in new
chr17	62481120	62606241	chr17:62481120-62606241	0	+	62481125	62606241	789624	17	86,72,70,44,168,93,111,137,153,67,98,82,92,90,170,139,112,	0,39652,41083,42013,55049,72542,78895,83880,92094,95588,97356,98990,105014,115464,119530,120921,125009,
#Partially deleted in new
chr17	62516320	62516767	chr17:62516320-62516767	7	-	62516320	62516320	16724991	1	447,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	62549725	62552121	chr17:62549725-62552121	3	+	62549725	62549725	8553170	2	1188,519,	0,1877,
#Partially deleted in new
chr17	62552304	62576744	chr17:62552304-62576744	0	+	62552304	62576744	789624	5	93,111,137,153,36,	0,7711,12696,20910,24404,
#Partially deleted in new
chr17	62553443	62560309	chr17:62553443-62560309	0	+	62553443	62553443	8553170	2	312,294,	0,6572,
#Partially deleted in new
chr17	62572846	62576728	chr17:62572846-62576728	0	+	62572846	62572846	8553170	2	521,20,	0,3862,
#Partially deleted in new
chr17	62600277	62606188	chr17:62600277-62606188	0	+	62600277	62600277	8553170	3	315,139,59,	0,1764,5852,
#Partially deleted in new
chr17	62606095	62612573	chr17:62606095-62612573	0	+	62606095	62606095	8553170	3	146,108,182,	0,1945,6296,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	62611945	62615481	chr17:62611945-62615481	0	+	62611945	62611945	8553170	1	3536,	0,
#Deleted in new
chr17	62626030	62626453	chr17:62626030-62626453	3	+	62626030	62626030	8553170	1	423,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	62626436	62627590	chr17:62626436-62627590	3	-	62626436	62626436	8553170	1	1154,	0,
#Partially deleted in new
chr17	62627400	62693597	chr17:62627400-62693597	3	+	62627802	62692451	0	30	520,402,174,165,114,144,189,155,108,116,149,218,143,103,139,36,161,68,101,143,115,164,109,239,169,150,120,180,27,1367,	0,37147,38693,39054,39356,39989,44248,44597,46662,48389,48982,49868,51103,52399,52769,53017,53399,53661,54436,54834,60888,61100,61451,62121,62493,62755,63241,63548,64711,64830,
#Partially deleted in new
chr17	62627684	62676604	chr17:62627684-62676604	0	+	62627684	62627684	8553170	11	236,402,174,165,114,144,189,155,108,116,222,	0,36863,38409,38770,39072,39705,43964,44313,46378,48105,48698,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	62661620	62661725	chr17:62661620-62661725	3	-	62661620	62661620	8553170	1	105,	0,
#Partially deleted in new
chr17	62676393	62680194	chr17:62676393-62680194	0	+	62676393	62679802	789624	5	138,218,114,103,25,	0,875,2110,3406,3776,
#Deleted in new
chr17	62679402	62681354	chr17:62679402-62681354	3	-	62679402	62679402	8553170	1	1952,	0,
#Partially deleted in new
chr17	62680630	62693553	chr17:62680630-62693553	0	+	62680630	62680630	8553170	14	330,68,101,143,115,164,109,239,169,150,120,180,27,1323,	0,431,1206,1604,7658,7870,8221,8891,9263,9525,10011,10318,11481,11600,
#Deleted in new
chr17	62681452	62682323	chr17:62681452-62682323	0	+	62681921	62682323	789624	2	485,89,	0,782,
#Partially deleted in new
chr17	62681457	62693595	chr17:62681457-62693595	1	+	62688602	62692451	789624	11	480,322,115,164,109,169,150,120,180,27,1365,	0,598,6831,7043,7394,8436,8698,9184,9491,10654,10773,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	62683904	62684010	chr17:62683904-62684010	3	+	62683904	62683904	8553170	1	106,	0,
#Deleted in new
chr17	62688857	62689933	chr17:62688857-62689933	0	+	62688857	62688857	8553170	3	103,67,40,	0,513,1036,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	62699243	62736107	chr17:62699243-62736107	0	+	62699243	62699243	8553170	2	536,22,	0,36842,
#Partially deleted in new
chr17	62701313	62806653	chr17:62701313-62806653	1	-	62701702	62801735	789624	11	445,43,114,110,167,1402,153,172,120,107,224,	0,4225,9917,21174,23624,34617,43062,58521,87166,100332,105116,
#Partially deleted in new
chr17	62701313	62736517	chr17:62701313-62736517	0	-	62701313	62701313	8553170	2	65,178,	0,35026,
#Partially deleted in new
chr17	62701313	62744514	chr17:62701313-62744514	0	-	62701608	62744514	789624	6	445,114,110,167,1402,139,	0,9917,21174,23624,34617,43062,
#Partially deleted in new
chr17	62701313	62703432	chr17:62701313-62703432	0	-	62701313	62701313	8553170	2	445,121,	0,1998,
#Partially deleted in new
chr17	62701314	62808334	chr17:62701314-62808334	3	-	62701702	62801735	789624	11	444,43,114,110,167,1402,153,172,120,107,258,	0,4224,9916,21173,23623,34616,43061,58520,87165,100331,106762,
#Partially deleted in new
chr17	62701314	62808344	chr17:62701314-62808344	1	-	62701702	62801735	789624	12	444,43,114,110,167,1402,153,114,172,120,107,268,	0,4224,9916,21173,23623,34616,43061,45550,58520,87165,100331,106762,
#Partially deleted in new
chr17	62704947	62808290	chr17:62704947-62808290	1	-	62705506	62801735	789624	11	634,114,110,167,1402,150,172,120,107,148,214,	0,6283,17540,19990,30983,39428,54887,83532,96698,99952,103129,
#Partially deleted in new
chr17	62706205	62737922	chr17:62706205-62737922	0	+	62706205	62706205	789624	3	264,176,1837,	0,1226,29880,
#Partially deleted in new
chr17	62706233	62737915	chr17:62706233-62737915	3	+	62706233	62706233	8553170	3	236,124,2785,	0,19794,28897,
#Partially deleted in new
chr17	62706332	62736534	chr17:62706332-62736534	0	+	62706332	62706332	8553170	2	137,449,	0,29753,
#Partially deleted in new
chr17	62749975	62759991	chr17:62749975-62759991	0	-	62750198	62759991	789624	2	561,157,	0,9859,
#Partially deleted in new
chr17	62780939	62808325	chr17:62780939-62808325	0	-	62780939	62780939	8553170	4	60,120,107,249,	0,7540,20706,27137,
#Partially deleted in new
chr17	62788506	62806640	chr17:62788506-62806640	0	-	62788506	62801735	789624	4	93,107,148,211,	0,13139,16393,17923,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	62808499	62836371	chr17:62808499-62836371	3	+	62808499	62808499	789624	2	452,1359,	0,26513,
#Partially deleted in new
chr17	62841100	62841645	chr17:62841100-62841645	7	+	62841100	62841100	16724991	1	545,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	62910020	62966583	chr17:62910020-62966583	1	-	62910020	62910020	8553170	6	1405,203,179,74,92,127,	0,10385,19498,25359,26753,56436,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	62910689	62968549	chr17:62910689-62968549	3	-	62910689	62910689	8553170	5	736,179,74,92,50,	0,18829,24690,26084,57810,
#Deleted in new
chr17	62944214	62944312	chr17:62944214-62944312	3	+	62944214	62944214	5263520	1	98,	0,
#Deleted in new
chr17	62950830	62951188	chr17:62950830-62951188	7	-	62950830	62950830	16724991	1	358,	0,
#Deleted in new
chr17	62966816	62968549	chr17:62966816-62968549	1	-	62966816	62966816	8553170	2	862,50,	0,1683,
#Deleted in new
chr17	62978493	62978841	chr17:62978493-62978841	7	-	62978493	62978493	16724991	1	348,	0,
#Deleted in new
chr17	63004671	63005152	chr17:63004671-63005152	7	-	63004671	63004671	16724991	1	481,	0,
#Partially deleted in new
chr17	63009555	63427699	chr17:63009555-63427699	3	+	63009559	63421955	789624	25	71,72,72,149,187,264,126,282,134,232,167,608,109,123,237,186,94,134,124,176,133,92,147,101,7701,	0,64387,89619,184435,191215,228258,258192,304832,309401,330545,341694,345227,370162,379079,379752,386187,389265,395566,396598,401955,402442,403987,405972,408751,410443,
#Partially deleted in new
chr17	63009559	63422356	chr17:63009559-63422356	1	+	63009559	63421955	789624	26	67,72,72,149,187,264,126,282,134,232,167,608,109,123,237,186,94,134,124,176,133,30,92,147,101,2358,	0,64383,89615,184431,191211,228254,258188,304828,309397,330541,341690,345223,370158,379075,379748,386183,389261,395562,396594,401951,402438,403120,403983,405968,408747,410439,
#Partially deleted in new
chr17	63073944	63194082	chr17:63073944-63194082	0	+	63073944	63194082	789624	4	70,183,111,92,	0,25230,77325,120046,
#Partially deleted in new
chr17	63073958	63194082	chr17:63073958-63194082	0	+	63073958	63194082	789624	3	56,183,92,	0,25216,120032,
#Deleted in new
chr17	63088161	63089197	chr17:63088161-63089197	7	-	63088161	63088161	16724991	1	1036,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	63117018	63130947	chr17:63117018-63130947	3	-	63117018	63117018	8553170	4	176,118,100,84,	0,3670,8089,13845,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	63148227	63155226	chr17:63148227-63155226	0	+	63148227	63148227	8553170	1	6999,	0,
#Deleted in new
chr17	63182165	63182817	chr17:63182165-63182817	7	+	63182165	63182165	16724991	1	652,	0,
#Partially deleted in new
chr17	63193929	63197785	chr17:63193929-63197785	1	-	63193929	63193929	8553170	2	141,164,	0,3692,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	63193930	63339053	chr17:63193930-63339053	3	-	63193930	63193930	8553170	4	140,111,92,148,	0,126450,140094,144975,
#Partially deleted in new
chr17	63193993	63424138	chr17:63193993-63424138	0	+	63193993	63420061	789624	21	146,187,264,126,282,134,232,167,608,109,123,237,186,94,134,124,176,133,92,147,4140,	0,6777,43820,73754,120394,124963,146107,157256,160789,185724,194641,195314,201749,204827,211128,212160,217517,218004,219549,221534,226005,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	63305261	63313521	chr17:63305261-63313521	3	-	63305261	63305261	8553170	2	351,211,	0,8049,
#Partially deleted in new
chr17	63331983	63332539	chr17:63331983-63332539	7	-	63331983	63331983	16724991	1	556,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	63355054	63391757	chr17:63355054-63391757	0	+	63355054	63355054	8553170	4	336,109,123,2450,	0,24663,33580,34253,
#Partially deleted in new
chr17	63381230	63414312	chr17:63381230-63414312	3	-	63381230	63381230	8553170	3	265,100,159,	0,6758,32923,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	63388691	63396976	chr17:63388691-63396976	0	+	63388691	63388691	8553170	3	66,237,1234,	0,616,7051,
#Deleted in new
chr17	63393354	63393586	chr17:63393354-63393586	7	+	63393354	63393354	16724991	1	232,	0,
#Partially deleted in new
chr17	63395742	63399286	chr17:63395742-63399286	0	+	63395742	63399042	789624	2	186,466,	0,3078,
#Deleted in new
chr17	63413170	63415585	chr17:63413170-63415585	0	+	63413170	63413170	8553170	2	464,58,	0,2357,
#Partially deleted in new
chr17	63430467	63432211	chr17:63430467-63432211	3	-	63430467	63430467	8553170	2	214,338,	0,1406,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	63432303	63446378	chr17:63432303-63446378	3	-	63434401	63437547	789624	6	2291,158,104,99,215,134,	0,2782,3384,3750,5042,13941,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	63432303	63440866	chr17:63432303-63440866	1	-	63434401	63437547	789624	6	2291,158,104,99,215,140,	0,2782,3384,3750,5042,8423,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	63432304	63446184	chr17:63432304-63446184	1	-	63435110	63437547	789624	6	2290,158,104,146,215,287,	0,2781,3383,3702,5041,13593,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	63432306	63446184	chr17:63432306-63446184	1	-	63434401	63437547	789624	6	2288,158,104,99,215,287,	0,2779,3381,3747,5039,13591,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	63433144	63446294	chr17:63433144-63446294	1	-	63433345	63437547	789624	6	271,158,104,99,215,50,	0,1941,2543,2909,4201,13100,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	63433215	63437949	chr17:63433215-63437949	1	-	63434401	63437547	789624	5	1379,158,104,99,604,	0,1870,2472,2838,4130,
#Partially deleted in new
chr17	63433563	63446291	chr17:63433563-63446291	1	-	63434582	63437547	789624	5	1031,104,99,215,47,	0,2124,2490,3782,12681,
#Partially deleted in new
chr17	63433908	63435184	chr17:63433908-63435184	0	-	63434499	63435184	789624	2	712,99,	0,1177,
#Partially deleted in new
chr17	63433963	63446306	chr17:63433963-63446306	1	-	63434401	63437460	789624	6	631,158,104,99,139,62,	0,1122,1724,2090,3382,12281,
#Partially deleted in new
chr17	63434139	63438311	chr17:63434139-63438311	1	-	63434401	63438228	789624	6	455,158,104,99,215,271,	0,946,1548,1914,3206,3901,
#Partially deleted in new
chr17	63434191	63438170	chr17:63434191-63438170	0	-	63434401	63438170	789624	6	403,158,104,99,215,148,	0,894,1496,1862,3154,3831,
#Partially deleted in new
chr17	63434260	63436706	chr17:63434260-63436706	0	-	63434260	63434260	8553170	5	334,158,104,99,174,	0,825,1427,1793,2272,
#Partially deleted in new
chr17	63434313	63440211	chr17:63434313-63440211	1	-	63434401	63440199	789624	6	281,158,104,99,215,20,	0,772,1374,1740,3032,5878,
#Partially deleted in new
chr17	63434330	63435399	chr17:63434330-63435399	0	-	63434330	63434330	8553170	2	264,314,	0,755,
#Partially deleted in new
chr17	63434402	63442852	chr17:63434402-63442852	0	-	63434402	63437547	789624	6	192,158,104,99,215,80,	0,683,1285,1651,2943,8370,
#Partially deleted in new
chr17	63434477	63446308	chr17:63434477-63446308	0	-	63434477	63434477	8553170	5	117,158,104,99,64,	0,608,1210,1576,11767,
#Partially deleted in new
chr17	63435414	63446306	chr17:63435414-63446306	0	-	63435414	63435414	8553170	4	377,99,215,62,	0,639,1931,10830,
#Partially deleted in new
chr17	63435557	63446340	chr17:63435557-63446340	0	-	63435557	63435557	8553170	5	16,104,99,215,96,	0,130,496,1788,10687,
#Partially deleted in new
chr17	63435711	63446354	chr17:63435711-63446354	0	-	63435711	63437547	789624	4	80,146,215,110,	0,295,1634,10533,
#Partially deleted in new
chr17	63437086	63446331	chr17:63437086-63446331	0	-	63437086	63437086	8553170	2	474,87,	0,9158,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	63437371	63440839	chr17:63437371-63440839	0	-	63437371	63439206	789624	3	189,179,113,	0,1740,3355,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	63454992	63455817	chr17:63454992-63455817	3	+	63454992	63454992	8553170	2	239,116,	0,709,
#Deleted in new
chr17	63471603	63472093	chr17:63471603-63472093	7	+	63471603	63471603	16724991	1	490,	0,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr17	63477060	63498380	chr17:63477060-63498380	1	+	63477094	63497023	789624	24	283,168,94,144,192,98,173,224,145,99,123,212,137,159,88,144,192,98,173,224,145,99,123,1583,	0,870,1946,2708,3276,4030,4505,5405,5968,6399,6788,7269,8175,9496,9925,11587,11880,13893,14148,16375,16861,17311,19333,19737,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	63477060	63485772	chr17:63477060-63485772	0	+	63477094	63479858	789624	12	283,168,144,192,98,173,224,145,99,123,212,537,	0,870,2708,3276,4030,4505,5405,5968,6399,6788,7269,8175,
#Partially deleted in new
chr17	63477060	63478898	chr17:63477060-63478898	0	+	63477060	63477060	8553170	3	283,168,88,	0,870,1750,
#Partially deleted in new
chr17	63477060	63483558	chr17:63477060-63483558	0	+	63477060	63477060	8553170	9	283,168,94,144,192,98,173,224,99,	0,870,1946,2708,3276,4030,4505,5405,6399,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	63477069	63478517	chr17:63477069-63478517	0	+	63477069	63477069	8553170	2	274,587,	0,861,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr17	63477070	63498380	chr17:63477070-63498380	3	+	63477094	63497366	0	25	273,168,94,144,192,98,173,224,145,99,123,212,137,159,88,144,192,98,173,224,145,99,123,188,1244,	0,860,1936,2698,3266,4020,4495,5395,5958,6389,6778,7259,8165,9486,9915,11577,11870,13883,14138,16365,16851,17301,19323,19727,20066,
#Partially deleted in new
chr17	63477481	63481185	chr17:63477481-63481185	0	+	63477541	63481185	789624	6	309,168,94,144,192,95,	0,449,1525,2287,2855,3609,
#Partially deleted in new
chr17	63477492	63480425	chr17:63477492-63480425	0	+	63477492	63477492	8553170	4	606,94,144,89,	0,1514,2276,2844,
#Partially deleted in new
chr17	63484337	63487073	chr17:63484337-63487073	0	+	63484337	63485124	789624	5	204,403,13,159,88,	0,632,2021,2219,2648,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr17	63484822	63521848	chr17:63484822-63521848	3	+	63484867	63507628	789624	31	244,137,159,88,144,192,98,173,224,145,99,123,188,57,129,106,141,189,192,98,173,141,223,145,83,123,183,335,132,109,289,	0,413,1734,2163,3825,4118,6131,6386,8613,9099,9549,11571,11975,22233,22418,22741,23386,23816,24260,24541,24730,25260,25500,25865,28559,29149,34105,34688,35412,36519,36737,
#Partially deleted in new
chr17	63484839	63497618	chr17:63484839-63497618	1	+	63484867	63497366	0	14	227,137,159,88,144,192,98,173,224,145,99,123,188,482,	0,396,1717,2146,3808,4101,6114,6369,8596,9082,9532,11554,11958,12297,
#Partially deleted in new
chr17	63484843	63489091	chr17:63484843-63489091	0	+	63484867	63486578	789624	7	223,137,80,159,88,144,151,	0,392,1448,1713,2142,3804,4097,
#Partially deleted in new
chr17	63484845	63497505	chr17:63484845-63497505	1	+	63484867	63497366	0	13	221,137,159,88,144,192,98,173,224,145,99,188,369,	0,390,1711,2140,3802,4095,6108,6363,8590,9076,9526,11952,12291,
#Partially deleted in new
chr17	63484845	63497438	chr17:63484845-63497438	0	+	63484867	63485244	789624	12	124,137,159,88,144,98,173,224,145,99,188,302,	0,390,1711,2140,3802,6108,6363,8590,9076,9526,11952,12291,
#Partially deleted in new
chr17	63484845	63497618	chr17:63484845-63497618	0	+	63484867	63488613	789624	14	221,137,159,88,222,192,98,173,224,145,99,123,188,482,	0,390,1711,2140,3724,4095,6108,6363,8590,9076,9526,11548,11952,12291,
#Partially deleted in new
chr17	63484867	63489040	chr17:63484867-63489040	0	+	63484867	63485244	789624	6	102,137,159,88,222,100,	0,368,1689,2118,3702,4073,
#Partially deleted in new
chr17	63486822	63493657	chr17:63486822-63493657	0	+	63486822	63486822	8553170	6	251,144,192,98,173,222,	0,1825,2118,4131,4386,6613,
#Partially deleted in new
chr17	63487000	63494405	chr17:63487000-63494405	0	+	63487000	63494405	789624	7	73,144,192,98,160,145,34,	0,1647,1940,3953,4208,6921,7371,
#Partially deleted in new
chr17	63489882	63497163	chr17:63489882-63497163	0	+	63489882	63489882	8553170	6	146,145,99,123,188,27,	0,4039,4489,6511,6915,7254,
#Partially deleted in new
chr17	63490347	63493446	chr17:63490347-63493446	0	+	63490347	63490347	8553170	3	704,173,11,	0,861,3088,
#Partially deleted in new
chr17	63493755	63494467	chr17:63493755-63494467	0	+	63493755	63493755	8553170	2	311,96,	0,616,
#Partially deleted in new
chr17	63494403	63497153	chr17:63494403-63497153	0	+	63494403	63497023	789624	3	67,123,356,	0,1990,2394,
#Partially deleted in new
chr17	63496139	63496985	chr17:63496139-63496985	0	+	63496139	63496139	8553170	2	377,188,	0,658,
#Partially deleted in new
chr17	63507055	63519806	chr17:63507055-63519806	7	+	63507055	63507055	16724991	13	57,159,88,141,192,98,185,223,145,83,123,183,296,	0,508,906,1153,2027,2308,2497,3267,3632,6326,6916,11872,12455,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	63523333	63546032	chr17:63523333-63546032	1	+	63523413	63545902	789624	14	156,231,162,206,426,155,86,200,253,194,85,163,187,424,	0,805,6757,7003,10552,12335,12649,14731,15076,18907,20242,20915,21744,22275,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	63523333	63548977	chr17:63523333-63548977	1	+	63523413	63545902	789624	15	156,231,162,206,426,155,86,200,253,194,85,163,187,337,176,	0,805,6757,7003,10552,12335,12649,14731,15076,18907,20242,20915,21744,22275,25468,
#Partially deleted in new
chr17	63523356	63536213	chr17:63523356-63536213	1	+	63523413	63536076	789624	6	133,231,162,206,426,545,	0,782,6734,6980,10529,12312,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	63523358	63546076	chr17:63523358-63546076	0	+	63523413	63530114	789624	13	131,98,162,206,426,400,200,253,194,85,163,187,468,	0,780,6732,6978,10527,12310,14706,15051,18882,20217,20890,21719,22250,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	63523360	63546034	chr17:63523360-63546034	1	+	63523413	63545902	789624	13	129,231,162,206,426,400,200,253,194,85,163,187,426,	0,778,6730,6976,10525,12308,14704,15049,18880,20215,20888,21717,22248,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	63523402	63546727	chr17:63523402-63546727	3	+	63523413	63545902	789624	14	87,231,162,206,426,400,200,253,194,85,108,163,187,1119,	0,736,6688,6934,10483,12266,14662,15007,18838,20173,20609,20846,21675,22206,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	63550460	63594266	chr17:63550460-63594266	3	+	63550677	63589172	789624	7	355,159,112,119,210,118,5267,	0,28009,28876,29364,33041,34750,38539,
#Partially deleted in new
chr17	63550481	63594266	chr17:63550481-63594266	0	+	63550677	63589172	789624	8	334,159,112,119,210,118,238,64,	0,27988,28855,29343,33020,34729,38518,43721,
#Partially deleted in new
chr17	63550499	63589785	chr17:63550499-63589785	1	+	63550677	63589172	789624	3	316,118,786,	0,34711,38500,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	63550509	63552555	chr17:63550509-63552555	0	+	63550509	63550509	8553170	2	306,235,	0,1811,
#Partially deleted in new
chr17	63550546	63585251	chr17:63550546-63585251	0	+	63550677	63585251	789624	5	269,112,119,210,41,	0,28790,29278,32955,34664,
#Deleted in new
chr17	63573241	63573345	chr17:63573241-63573345	3	-	63573241	63573241	8553170	1	104,	0,
#Partially deleted in new
chr17	63589063	63594259	chr17:63589063-63594259	0	+	63589063	63589063	8553170	3	174,94,57,	0,1927,5139,
#Partially deleted in new
chr17	63600871	63608365	chr17:63600871-63608365	3	+	63601083	63608002	789624	5	492,107,128,178,564,	0,3662,5441,6415,6930,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	63600881	63608364	chr17:63600881-63608364	0	+	63600881	63600881	8553170	4	482,107,1152,563,	0,3652,5431,6920,
#Partially deleted in new
chr17	63610771	63611184	chr17:63610771-63611184	7	-	63610771	63610771	16724991	1	413,	0,
#Partially deleted in new
chr17	63622414	63695089	chr17:63622414-63695089	1	+	63622759	63693777	0	18	23,47,122,93,41,100,114,121,134,74,68,93,192,149,132,130,178,1541,	0,302,10266,12294,23619,30142,35379,44525,59351,63102,66112,66374,67129,67849,68687,69318,69827,71134,
#Partially deleted in new
chr17	63622424	63693960	chr17:63622424-63693960	1	+	63622759	63693777	789624	17	339,122,93,41,100,114,121,134,62,68,93,192,149,132,130,178,412,	0,10256,12284,23609,30132,35369,44515,59341,63092,66102,66364,67119,67839,68677,69308,69817,71124,
#Partially deleted in new
chr17	63622439	63695105	chr17:63622439-63695105	3	+	63622759	63693777	0	16	324,122,41,100,114,121,134,74,68,93,192,149,132,130,178,1557,	0,10241,23594,30117,35354,44500,59326,63077,66087,66349,67104,67824,68662,69293,69802,71109,
#Partially deleted in new
chr17	63622441	63696303	chr17:63622441-63696303	1	+	63622759	63693777	0	17	322,122,93,41,100,114,121,134,74,68,93,192,149,132,130,178,2755,	0,10239,12267,23592,30115,35352,44498,59324,63075,66085,66347,67102,67822,68660,69291,69800,71107,
#Partially deleted in new
chr17	63622709	63693874	chr17:63622709-63693874	1	+	63622759	63693777	789624	16	54,122,41,100,114,121,134,62,68,93,192,149,132,130,178,326,	0,9971,23324,29847,35084,44230,59056,62807,65817,66079,66834,67554,68392,69023,69532,70839,
#Partially deleted in new
chr17	63622709	63693874	chr17:63622709-63693874	0	+	63622759	63652564	789624	16	54,118,41,100,114,121,134,74,68,93,192,149,132,130,178,326,	0,9971,23324,29847,35084,44230,59056,62807,65817,66079,66834,67554,68392,69023,69532,70839,
#Deleted in new
chr17	63636600	63637113	chr17:63636600-63637113	7	+	63636600	63636600	16724991	1	513,	0,
#Partially deleted in new
chr17	63666985	63688868	chr17:63666985-63688868	0	+	63666985	63668165	789624	7	75,189,70,134,62,68,80,	0,1160,5859,14780,18531,21541,21803,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	63682335	63741845	chr17:63682335-63741845	0	-	63704572	63717092	789624	14	423,83,125,43,151,105,124,109,122,103,80,58,56,105,	0,6757,8137,21669,22096,24299,28155,28392,31070,31670,34739,44302,46022,59405,
#Deleted in new
chr17	63688198	63689614	chr17:63688198-63689614	0	+	63688198	63688198	8553170	3	396,93,71,	0,590,1345,
#Deleted in new
chr17	63688528	63689692	chr17:63688528-63689692	0	+	63688528	63688528	8553170	3	66,93,406,	0,260,758,
#Deleted in new
chr17	63688741	63689997	chr17:63688741-63689997	0	+	63688741	63688741	8553170	2	140,454,	0,802,
#Deleted in new
chr17	63690329	63692367	chr17:63690329-63692367	0	+	63690329	63691037	789624	4	83,241,130,126,	0,663,1403,1912,
#Deleted in new
chr17	63695901	63700140	chr17:63695901-63700140	3	-	63698551	63699298	0	5	2810,140,42,92,109,	0,2897,3126,3355,4130,
#Deleted in new
chr17	63697815	63700108	chr17:63697815-63700108	0	-	63697815	63697815	8553170	3	896,271,852,	0,983,1441,
#Deleted in new
chr17	63697815	63700685	chr17:63697815-63700685	1	-	63698551	63699298	0	5	896,140,42,139,317,	0,983,1212,1441,2553,
#Deleted in new
chr17	63697832	63700132	chr17:63697832-63700132	1	-	63698551	63698875	789624	5	879,140,86,92,101,	0,966,1195,1424,2199,
#Deleted in new
chr17	63698188	63700113	chr17:63698188-63700113	0	-	63698551	63698875	789624	6	184,215,140,86,139,82,	0,308,610,839,1068,1843,
#Deleted in new
chr17	63698255	63699362	chr17:63698255-63699362	0	-	63698255	63698255	8553170	2	814,106,	0,1001,
#Deleted in new
chr17	63698288	63699861	chr17:63698288-63699861	1	-	63698551	63699298	0	5	423,140,42,92,59,	0,510,739,968,1514,
#Deleted in new
chr17	63698334	63700102	chr17:63698334-63700102	1	-	63698551	63699298	789624	5	377,20,42,92,71,	0,464,693,922,1697,
#Deleted in new
chr17	63698466	63700132	chr17:63698466-63700132	0	-	63698466	63698466	8553170	4	245,271,92,101,	0,332,790,1565,
#Deleted in new
chr17	63698477	63699162	chr17:63698477-63699162	1	-	63698551	63698875	789624	3	234,140,135,	0,321,550,
#Deleted in new
chr17	63698497	63699344	chr17:63698497-63699344	0	-	63698497	63698497	8553170	2	214,546,	0,301,
#Deleted in new
chr17	63698608	63701172	chr17:63698608-63701172	0	-	63698608	63699298	789624	5	103,140,42,92,189,	0,190,419,648,2375,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	63700846	63702670	chr17:63700846-63702670	3	+	63700846	63700846	789624	1	1824,	0,
#Partially deleted in new
chr17	63702818	63741875	chr17:63702818-63741875	3	-	63703598	63728369	0	13	933,43,242,105,172,124,109,122,103,29,58,80,135,	0,1186,1522,3816,4428,7672,7909,10587,11187,20479,23819,25515,38922,
#Partially deleted in new
chr17	63702818	63741860	chr17:63702818-63741860	1	-	63703598	63728369	789624	11	933,43,242,105,172,124,109,122,103,80,120,	0,1186,1522,3816,4428,7672,7909,10587,11187,25515,38922,
#Partially deleted in new
chr17	63702818	63741861	chr17:63702818-63741861	1	-	63703598	63728369	0	11	933,43,242,105,172,124,109,122,103,56,121,	0,1186,1522,3816,4428,7672,7909,10587,11187,25539,38922,
#Partially deleted in new
chr17	63702834	63741761	chr17:63702834-63741761	1	-	63704878	63714057	789624	10	2074,96,172,124,109,122,103,58,80,21,	0,3800,4412,7656,7893,10571,11171,23803,25499,38906,
#Partially deleted in new
chr17	63702834	63741874	chr17:63702834-63741874	1	-	63703598	63714057	0	12	917,43,242,105,172,124,109,122,103,58,80,134,	0,1170,1506,3800,4412,7656,7893,10571,11171,23803,25499,38906,
#Partially deleted in new
chr17	63702834	63741796	chr17:63702834-63741796	1	-	63703598	63728369	0	11	917,43,242,105,172,124,109,122,103,56,343,	0,1170,1506,3800,4412,7656,7893,10571,11171,25523,38619,
#Partially deleted in new
chr17	63702837	63741832	chr17:63702837-63741832	1	-	63703598	63714057	0	12	914,43,242,105,172,124,109,122,103,58,56,92,	0,1167,1503,3797,4409,7653,7890,10568,11168,23800,25520,38903,
#Partially deleted in new
chr17	63702839	63741878	chr17:63702839-63741878	1	-	63704024	63728369	0	11	912,43,151,105,172,124,109,122,58,80,138,	0,1165,1592,3795,4407,7651,7888,10566,23798,25494,38901,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	63702839	63706524	chr17:63702839-63706524	0	-	63702839	63702839	8553170	1	3685,	0,
#Partially deleted in new
chr17	63702839	63741799	chr17:63702839-63741799	1	-	63703639	63714057	789624	11	912,242,105,172,124,109,122,103,58,80,59,	0,1501,3795,4407,7651,7888,10566,11166,23798,25494,38901,
#Partially deleted in new
chr17	63702841	63741986	chr17:63702841-63741986	1	-	63704282	63728369	0	9	1741,105,172,124,109,122,103,56,246,	0,3793,4405,7649,7886,10564,11164,25516,38899,
#Partially deleted in new
chr17	63702844	63752097	chr17:63702844-63752097	3	-	63728407	63752097	789624	12	907,43,242,105,172,109,122,103,29,58,80,158,	0,1160,1496,3790,4402,7883,10561,11161,20453,23793,25489,49095,
#Partially deleted in new
chr17	63702886	63741815	chr17:63702886-63741815	1	-	63704024	63728369	789624	11	865,43,151,105,172,124,109,122,103,56,75,	0,1118,1545,3748,4360,7604,7841,10519,11119,25471,38854,
#Partially deleted in new
chr17	63702896	63741799	chr17:63702896-63741799	1	-	63703598	63728369	789624	11	855,105,172,124,109,122,103,29,58,80,59,	0,3738,4350,7594,7831,10509,11109,20401,23741,25437,38844,
#Partially deleted in new
chr17	63703012	63741799	chr17:63703012-63741799	1	-	63704024	63714057	789624	12	739,43,151,105,172,124,109,122,103,58,80,59,	0,992,1419,3622,4234,7478,7715,10393,10993,23625,25321,38728,
#Deleted in new
chr17	63703014	63704455	chr17:63703014-63704455	0	-	63703995	63704455	789624	2	1033,115,	0,1326,
#Partially deleted in new
chr17	63703177	63741788	chr17:63703177-63741788	1	-	63704024	63728369	789624	13	574,43,151,105,172,124,109,122,103,29,58,80,48,	0,827,1254,3457,4069,7313,7550,10228,10828,20120,23460,25156,38563,
#Partially deleted in new
chr17	63703388	63741796	chr17:63703388-63741796	0	-	63704572	63728369	789624	11	659,151,105,124,109,122,103,29,58,80,56,	0,1043,3246,7102,7339,10017,10617,19909,23249,24945,38352,
#Partially deleted in new
chr17	63703408	63728385	chr17:63703408-63728385	1	-	63703639	63728369	789624	9	343,105,124,109,122,103,29,58,52,	0,3226,7082,7319,9997,10597,19889,23229,24925,
#Partially deleted in new
chr17	63703419	63741785	chr17:63703419-63741785	1	-	63703598	63728369	789624	11	332,105,172,124,109,122,103,29,58,80,68,	0,3215,3827,7071,7308,9986,10586,19878,23218,24914,38298,
#Partially deleted in new
chr17	63703612	63741799	chr17:63703612-63741799	1	-	63703639	63728369	789624	12	139,242,105,172,124,109,122,103,29,58,80,59,	0,728,3022,3634,6878,7115,9793,10393,19685,23025,24721,38128,
#Partially deleted in new
chr17	63703657	63741875	chr17:63703657-63741875	1	-	63704024	63728369	0	11	94,43,151,105,172,124,109,122,103,80,135,	0,347,774,2977,3589,6833,7070,9748,10348,24676,38083,
#Partially deleted in new
chr17	63703699	63723326	chr17:63703699-63723326	0	-	63713506	63723326	789624	9	52,43,242,105,172,124,109,122,29,	0,305,641,2935,3547,6791,7028,9706,19598,
#Partially deleted in new
chr17	63703705	63741785	chr17:63703705-63741785	0	-	63704572	63728369	789624	9	46,242,105,124,109,122,103,56,45,	0,635,2929,6785,7022,9700,10300,24652,38035,
#Partially deleted in new
chr17	63704207	63741832	chr17:63704207-63741832	1	-	63704572	63714057	789624	9	375,105,124,109,122,103,58,80,92,	0,2427,6283,6520,9198,9798,22430,24126,37533,
#Partially deleted in new
chr17	63704416	63741782	chr17:63704416-63741782	1	-	63704889	63728369	789624	10	492,105,124,109,122,103,29,58,80,42,	0,2218,6074,6311,8989,9589,18881,22221,23917,37324,
#Partially deleted in new
chr17	63704440	63741845	chr17:63704440-63741845	0	-	63704440	63728369	789624	11	142,105,172,124,109,122,103,29,58,56,105,	0,2194,2806,6050,6287,8965,9565,18857,22197,23917,37300,
#Partially deleted in new
chr17	63704456	63714554	chr17:63704456-63714554	0	-	63704456	63704456	8553170	7	126,105,172,124,109,122,549,	0,2178,2790,6034,6271,8949,9549,
#Partially deleted in new
chr17	63704483	63741796	chr17:63704483-63741796	1	-	63704878	63728369	789624	11	425,105,172,124,109,122,103,29,58,80,56,	0,2151,2763,6007,6244,8922,9522,18814,22154,23850,37257,
#Partially deleted in new
chr17	63704483	63728324	chr17:63704483-63728324	0	-	63704483	63704483	8553170	8	99,105,124,109,122,103,29,1687,	0,2151,6007,6244,8922,9522,18814,22154,
#Partially deleted in new
chr17	63704525	63741815	chr17:63704525-63741815	0	-	63704525	63728369	789624	9	57,96,172,124,109,122,103,56,75,	0,2109,2721,5965,6202,8880,9480,23832,37215,
#Partially deleted in new
chr17	63704599	63741769	chr17:63704599-63741769	1	-	63704878	63728369	789624	9	309,105,172,124,109,122,103,80,29,	0,2035,2647,5891,6128,8806,9406,23734,37141,
#Partially deleted in new
chr17	63704878	63714057	chr17:63704878-63714057	1	-	63704878	63714057	789624	7	30,96,172,124,109,122,52,	0,1756,2368,5612,5849,8527,9127,
#Partially deleted in new
chr17	63706647	63741830	chr17:63706647-63741830	0	-	63717125	63728369	789624	10	92,172,124,109,122,103,80,58,80,90,	0,599,3843,4080,6758,7358,10427,19990,21686,35093,
#Partially deleted in new
chr17	63706660	63710943	chr17:63706660-63710943	0	-	63706660	63706660	8553170	3	79,172,453,	0,586,3830,
#Partially deleted in new
chr17	63706698	63741831	chr17:63706698-63741831	0	-	63706698	63713423	789624	7	41,172,124,109,122,80,91,	0,548,3792,4029,6707,21635,35042,
#Partially deleted in new
chr17	63706701	63723592	chr17:63706701-63723592	0	-	63706701	63706701	8553170	6	38,172,346,122,103,295,	0,545,3789,6704,7304,16596,
#Partially deleted in new
chr17	63707250	63723971	chr17:63707250-63723971	0	-	63707250	63707250	8553170	6	168,124,109,122,103,674,	0,3240,3477,6155,6755,16047,
#Partially deleted in new
chr17	63707358	63728404	chr17:63707358-63728404	0	-	63707358	63728369	789624	6	60,124,109,68,103,71,	0,3132,3369,6101,6647,20975,
#Partially deleted in new
chr17	63707378	63741764	chr17:63707378-63741764	0	-	63707378	63714057	789624	9	40,124,109,122,103,58,80,86,24,	0,3112,3349,6027,6627,19259,20955,33789,34362,
#Partially deleted in new
chr17	63707406	63723326	chr17:63707406-63723326	0	-	63713506	63723326	789624	5	104,124,109,122,29,	0,3084,3321,5999,15891,
#Partially deleted in new
chr17	63710361	63728384	chr17:63710361-63728384	0	-	63710361	63710361	8553170	6	253,109,122,103,58,51,	0,366,3044,3644,16276,17972,
#Partially deleted in new
chr17	63710506	63741798	chr17:63710506-63741798	0	-	63710506	63728369	789624	8	108,109,122,103,29,58,80,345,	0,221,2899,3499,12791,16131,17827,30947,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	63710727	63728413	chr17:63710727-63728413	0	-	63710727	63710727	8553170	7	109,87,122,103,29,58,80,	0,1725,2678,3278,12570,15910,17606,
#Partially deleted in new
chr17	63710774	63741837	chr17:63710774-63741837	0	-	63710774	63714057	789624	7	62,122,103,58,80,41,97,	0,2631,3231,15863,17559,26621,30966,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	63710789	63741796	chr17:63710789-63741796	0	-	63710789	63710789	8553170	6	47,93,122,103,56,56,	0,1663,2616,3216,17568,30951,
#Partially deleted in new
chr17	63710824	63719122	chr17:63710824-63719122	0	-	63710824	63710824	8553170	5	12,122,103,80,139,	0,2581,3181,6250,8159,
#Partially deleted in new
chr17	63713428	63741796	chr17:63713428-63741796	0	-	63713428	63714057	789624	6	99,103,58,56,210,56,	0,577,13209,14929,28025,28312,
#Partially deleted in new
chr17	63713436	63741843	chr17:63713436-63741843	0	-	63714080	63728369	789624	5	91,103,80,80,103,	0,569,3638,14897,28304,
#Partially deleted in new
chr17	63713486	63741788	chr17:63713486-63741788	0	-	63713486	63714057	789624	6	41,103,58,80,210,48,	0,519,13151,14847,27967,28254,
#Partially deleted in new
chr17	63713497	63719122	chr17:63713497-63719122	0	-	63713497	63713497	8553170	3	30,103,337,	0,508,5288,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	63713507	63715551	chr17:63713507-63715551	0	-	63713507	63713507	8553170	3	20,103,347,	0,498,1697,
#Partially deleted in new
chr17	63714026	63741796	chr17:63714026-63741796	0	-	63714026	63714057	789624	4	82,58,80,343,	0,12611,14307,27427,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	63725703	63741818	chr17:63725703-63741818	0	-	63725703	63725703	8553170	2	2710,78,	0,16037,
#Partially deleted in new
chr17	63745249	63773775	chr17:63745249-63773775	3	-	63746880	63766175	789624	13	1712,168,110,59,86,111,102,66,122,175,108,283,364,	0,6690,7070,7491,9183,10990,11219,15664,15980,18766,19490,20662,28162,
#Partially deleted in new
chr17	63746402	63773570	chr17:63746402-63773570	1	-	63746880	63766175	789624	14	559,168,110,59,86,111,102,66,122,175,108,283,87,159,	0,5537,5917,6338,8030,9837,10066,14511,14827,17613,18337,19509,26374,27009,
#Partially deleted in new
chr17	63746426	63764793	chr17:63746426-63764793	1	-	63746880	63756310	789624	12	535,168,110,59,86,27,82,102,66,122,175,54,	0,5513,5893,6314,8006,9813,9842,10042,14487,14803,17589,18313,
#Partially deleted in new
chr17	63751769	63773570	chr17:63751769-63773570	1	-	63751867	63766175	789624	12	338,110,59,86,111,102,66,122,175,108,283,159,	0,550,971,2663,4470,4699,9144,9460,12246,12970,14142,21642,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	63752779	63761537	chr17:63752779-63761537	0	-	63752779	63752779	8553170	6	20,86,111,102,66,308,	0,1653,3460,3689,8134,8450,
#Partially deleted in new
chr17	63765759	63773564	chr17:63765759-63773564	0	-	63765759	63765759	8553170	2	435,153,	0,7652,
#Partially deleted in new
chr17	63766118	63776351	chr17:63766118-63776351	0	-	63766118	63766175	789624	3	76,165,311,	0,8493,9922,
#Partially deleted in new
chr17	63773602	63792504	chr17:63773602-63792504	0	+	63787049	63792504	789624	3	259,237,93,	0,13431,18809,
#Partially deleted in new
chr17	63773862	63819317	chr17:63773862-63819317	3	+	63787049	63818398	789624	19	514,71,237,151,62,37,150,105,120,177,129,100,48,98,277,227,111,99,1624,	0,1245,13171,18549,24175,25726,26605,31208,32672,33861,34957,35697,36650,37213,38069,39365,41700,43005,43831,
#Partially deleted in new
chr17	63773883	63819317	chr17:63773883-63819317	1	+	63787049	63818398	789624	19	208,188,237,151,62,37,150,105,120,177,129,100,48,98,277,227,111,99,1624,	0,305,13150,18528,24154,25705,26584,31187,32651,33840,34936,35676,36629,37192,38048,39344,41679,42984,43810,
#Partially deleted in new
chr17	63774188	63819316	chr17:63774188-63819316	1	+	63787049	63818398	789624	18	188,237,151,62,37,150,105,120,177,129,100,48,98,277,227,111,99,1623,	0,12845,18223,23849,25400,26279,30882,32346,33535,34631,35371,36324,36887,37743,39039,41374,42679,43505,
#Partially deleted in new
chr17	63774189	63818398	chr17:63774189-63818398	1	+	63792547	63818398	789624	17	187,151,62,37,150,105,120,177,129,100,48,98,277,227,111,99,705,	0,18222,23848,25399,26278,30881,32345,33534,34630,35370,36323,36886,37742,39038,41373,42678,43504,
#Partially deleted in new
chr17	63787035	63798196	chr17:63787035-63798196	0	+	63787035	63787035	8553170	3	235,151,159,	0,5376,11002,
#Partially deleted in new
chr17	63787037	63805287	chr17:63787037-63805287	0	+	63787049	63800469	789624	6	233,151,62,44,150,217,	0,5374,11000,12442,13430,18033,
#Partially deleted in new
chr17	63792485	63806650	chr17:63792485-63806650	0	+	63792485	63800540	789624	5	77,62,150,105,116,	0,5552,7982,12585,14049,
#Partially deleted in new
chr17	63792528	63813290	chr17:63792528-63813290	0	+	63792528	63805058	789624	13	34,62,37,150,132,120,177,129,100,48,98,277,63,	0,5509,7060,7939,12515,14006,15195,16291,17031,17984,18547,19403,20699,
#Partially deleted in new
chr17	63792530	63819246	chr17:63792530-63819246	1	+	63792547	63818067	789624	17	32,62,37,150,105,120,177,129,100,48,98,277,227,111,99,336,1215,	0,5507,7058,7937,12540,14004,15193,16289,17029,17982,18545,19401,20697,23032,24337,25163,25501,
#Partially deleted in new
chr17	63800150	63806556	chr17:63800150-63806556	0	+	63800150	63800150	8553170	3	467,105,22,	0,4920,6384,
#Partially deleted in new
chr17	63800176	63806542	chr17:63800176-63806542	0	+	63800176	63800176	8553170	3	441,132,8,	0,4867,6358,
#Partially deleted in new
chr17	63805507	63819209	chr17:63805507-63819209	0	+	63805507	63805507	8553170	11	1147,177,129,100,48,98,277,227,111,99,1516,	0,2216,3312,4052,5005,5568,6424,7720,10055,11360,12186,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	63810262	63811271	chr17:63810262-63811271	0	+	63810262	63810262	8553170	2	298,196,	0,813,
#Partially deleted in new
chr17	63811280	63819247	chr17:63811280-63819247	0	+	63811280	63811280	8553170	5	928,227,111,99,1554,	0,1947,4282,5587,6413,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	63813271	63815970	chr17:63813271-63815970	0	+	63813271	63813271	8553170	2	183,408,	0,2291,
#Deleted in new
chr17	63816588	63817886	chr17:63816588-63817886	0	+	63816588	63816588	8553170	2	378,193,	0,1105,
#Deleted in new
chr17	63816967	63819099	chr17:63816967-63819099	0	+	63816967	63816967	8553170	2	378,165,	0,1967,
#Deleted in new
chr17	63817072	63819316	chr17:63817072-63819316	0	+	63817072	63817072	8553170	1	2244,	0,
#Partially deleted in new
chr17	63819432	63827671	chr17:63819432-63827671	3	-	63819801	63826902	789624	21	562,95,184,100,86,290,121,185,136,156,81,101,105,116,195,100,80,47,106,93,620,	0,646,822,1406,1597,1921,2290,2551,4384,4651,4898,5204,5392,5615,5809,6103,6623,6825,7134,7403,7619,
#Partially deleted in new
chr17	63820258	63822023	chr17:63820258-63822023	0	-	63820258	63820258	8553170	5	180,277,290,121,40,	0,580,1095,1464,1725,
#Deleted in new
chr17	63820914	63822189	chr17:63820914-63822189	0	-	63820914	63820914	8553170	4	24,86,290,467,	0,115,439,808,
#Partially deleted in new
chr17	63821428	63823891	chr17:63821428-63823891	0	-	63821828	63823891	789624	3	215,121,75,	0,294,2388,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	63823589	63824386	chr17:63823589-63824386	0	-	63823589	63823589	8553170	3	363,156,56,	0,494,741,
#Deleted in new
chr17	63824083	63824595	chr17:63824083-63824595	0	-	63824083	63824083	8553170	2	156,265,	0,247,
#Deleted in new
chr17	63825342	63826910	chr17:63825342-63826910	0	-	63826293	63826902	789624	6	94,100,80,47,126,75,	0,193,713,915,1204,1493,
#Deleted in new
chr17	63825342	63826930	chr17:63825342-63826930	0	-	63826642	63826902	789624	6	94,100,80,47,132,95,	0,193,713,915,1224,1493,
#Deleted in new
chr17	63825383	63827064	chr17:63825383-63827064	0	-	63825383	63826902	789624	6	53,100,80,47,106,229,	0,152,672,874,1183,1452,
#Deleted in new
chr17	63825590	63827329	chr17:63825590-63827329	0	-	63825590	63826902	789624	6	45,80,47,106,93,221,	0,465,667,976,1245,1518,
#Deleted in new
chr17	63825830	63827098	chr17:63825830-63827098	0	-	63825830	63825830	8553170	5	305,47,106,93,47,	0,427,736,1005,1221,
#Deleted in new
chr17	63825926	63827070	chr17:63825926-63827070	0	-	63825926	63825926	8553170	4	209,47,106,235,	0,331,640,909,
#Deleted in new
chr17	63826071	63827106	chr17:63826071-63827106	0	-	63826071	63826071	8553170	4	64,415,93,55,	0,186,764,980,
#Deleted in new
chr17	63826638	63827647	chr17:63826638-63827647	0	-	63826638	63826902	789624	4	34,93,138,278,	0,197,470,731,
#Deleted in new
chr17	63826844	63827647	chr17:63826844-63827647	0	-	63826844	63826902	789624	3	84,173,278,	0,207,525,
#Deleted in new
chr17	63827114	63830012	chr17:63827114-63830012	0	-	63827114	63827114	8553170	4	132,108,85,269,	0,255,2003,2629,
#Deleted in new
chr17	63827151	63830917	chr17:63827151-63830917	0	+	63827490	63830917	789624	5	55,106,57,231,109,	0,266,2981,3119,3657,
#Deleted in new
chr17	63827182	63832019	chr17:63827182-63832019	3	+	63827490	63831969	0	12	332,72,70,98,57,231,127,191,99,111,87,104,	0,955,2311,2669,2950,3088,3626,3853,4144,4323,4541,4733,
#Deleted in new
chr17	63827432	63827922	chr17:63827432-63827922	0	+	63827432	63827432	8553170	2	91,303,	0,187,
#Deleted in new
chr17	63827445	63830925	chr17:63827445-63830925	0	+	63828137	63830925	789624	8	69,95,72,70,98,57,231,117,	0,383,692,2048,2406,2687,2825,3363,
#Deleted in new
chr17	63827452	63831203	chr17:63827452-63831203	0	+	63827490	63831203	789624	7	62,72,70,98,231,127,168,	0,685,2041,2399,2818,3356,3583,
#Deleted in new
chr17	63827454	63831105	chr17:63827454-63831105	0	+	63828137	63831105	789624	8	60,91,70,98,57,231,127,70,	0,664,2039,2397,2678,2816,3354,3581,
#Deleted in new
chr17	63827459	63832019	chr17:63827459-63832019	0	+	63827459	63827459	8553170	11	55,1426,98,57,231,127,191,99,111,87,104,	0,678,2392,2673,2811,3349,3576,3867,4046,4264,4456,
#Deleted in new
chr17	63827459	63832019	chr17:63827459-63832019	1	+	63828137	63831969	0	13	55,250,72,70,98,57,231,127,191,99,111,87,104,	0,214,678,2034,2392,2673,2811,3349,3576,3867,4046,4264,4456,
#Deleted in new
chr17	63827459	63831118	chr17:63827459-63831118	0	+	63827459	63827459	8553170	3	153,1644,310,	0,1398,3349,
#Deleted in new
chr17	63827459	63829540	chr17:63827459-63829540	0	+	63827459	63827459	8553170	3	464,91,47,	0,659,2034,
#Deleted in new
chr17	63827459	63831151	chr17:63827459-63831151	0	+	63828137	63831151	789624	9	55,73,72,70,98,57,231,127,116,	0,391,678,2034,2392,2673,2811,3349,3576,
#Deleted in new
chr17	63827471	63831425	chr17:63827471-63831425	0	+	63827490	63831050	789624	7	43,72,70,98,231,191,99,	0,666,2022,2380,2799,3564,3855,
#Deleted in new
chr17	63827478	63831984	chr17:63827478-63831984	0	+	63827490	63829914	789624	11	36,72,98,57,231,127,191,99,111,87,69,	0,659,2373,2654,2792,3330,3557,3848,4027,4245,4437,
#Deleted in new
chr17	63827489	63832018	chr17:63827489-63832018	0	+	63827489	63827489	8553170	12	434,72,70,98,57,231,127,191,99,111,87,103,	0,648,2004,2362,2643,2781,3319,3546,3837,4016,4234,4426,
#Deleted in new
chr17	63827683	63832026	chr17:63827683-63832026	1	+	63828137	63831969	0	12	240,72,70,98,57,231,127,191,99,111,87,111,	0,454,1810,2168,2449,2587,3125,3352,3643,3822,4040,4232,
#Deleted in new
chr17	63827702	63828562	chr17:63827702-63828562	0	+	63827702	63827702	8553170	2	221,425,	0,435,
#Deleted in new
chr17	63827877	63831986	chr17:63827877-63831986	1	+	63828137	63831969	0	11	332,70,98,57,231,127,191,99,111,87,71,	0,1616,1974,2255,2393,2931,3158,3449,3628,3846,4038,
#Deleted in new
chr17	63830064	63831424	chr17:63830064-63831424	0	+	63830064	63830064	8553170	5	125,231,127,191,98,	0,206,744,971,1262,
#Deleted in new
chr17	63830385	63831553	chr17:63830385-63831553	0	+	63830385	63831159	789624	5	116,127,207,99,48,	0,423,634,941,1120,
#Deleted in new
chr17	63830681	63831523	chr17:63830681-63831523	0	+	63830681	63830681	8553170	4	254,191,99,18,	0,354,645,824,
#Deleted in new
chr17	63831338	63832019	chr17:63831338-63832019	0	+	63831338	63831338	8553170	2	472,104,	0,577,
#Partially deleted in new
chr17	63832080	63842674	chr17:63832080-63842674	1	-	63832937	63842674	789624	14	911,102,123,136,98,162,102,96,156,123,43,185,48,57,	0,988,1217,1506,1828,2086,2393,2624,3331,4841,5114,5360,10378,10537,
#Partially deleted in new
chr17	63832083	63842940	chr17:63832083-63842940	3	-	63832937	63842674	789624	13	908,102,123,136,98,162,102,96,156,123,43,185,482,	0,985,1214,1503,1825,2083,2390,2621,3328,4838,5111,5357,10375,
#Partially deleted in new
chr17	63832501	63838728	chr17:63832501-63838728	1	-	63832937	63838681	789624	13	490,102,123,136,98,162,102,96,156,123,43,185,119,	0,567,796,1085,1407,1665,1972,2203,2910,4420,4693,4939,6108,
#Partially deleted in new
chr17	63832603	63842466	chr17:63832603-63842466	1	-	63832937	63837616	789624	13	388,102,123,136,98,162,102,96,156,123,43,185,86,	0,465,694,983,1305,1563,1870,2101,2808,4318,4591,4837,9777,
#Deleted in new
chr17	63832638	63834744	chr17:63832638-63834744	0	-	63832937	63834744	789624	7	353,102,136,98,162,102,40,	0,430,948,1270,1528,1835,2066,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	63833704	63835145	chr17:63833704-63835145	0	-	63833704	63833704	8553170	5	18,98,162,102,441,	0,204,462,769,1000,
#Partially deleted in new
chr17	63833911	63842698	chr17:63833911-63842698	0	-	63837210	63842674	789624	8	95,162,102,96,156,123,43,240,	0,255,562,793,1500,3010,3283,8547,
#Partially deleted in new
chr17	63834177	63835657	chr17:63834177-63835657	0	-	63834177	63834177	8553170	4	151,102,96,246,	0,296,527,1234,
#Deleted in new
chr17	63834361	63835052	chr17:63834361-63835052	0	-	63834361	63834361	8553170	2	214,348,	0,343,
#Partially deleted in new
chr17	63835490	63837625	chr17:63835490-63837625	0	-	63836991	63837625	789624	4	77,123,92,185,	0,1431,1655,1950,
#Partially deleted in new
chr17	63836745	63842510	chr17:63836745-63842510	0	-	63836745	63836745	8553170	3	299,43,52,	0,449,5713,
#Deleted in new
chr17	63842465	63843065	chr17:63842465-63843065	0	-	63842465	63842674	789624	2	403,46,	0,554,
#Partially deleted in new
chr17	63849291	63862531	chr17:63849291-63862531	7	+	63849291	63849291	16724991	3	133,76,243,	0,5504,12997,
#Partially deleted in new
chr17	63849312	63859554	chr17:63849312-63859554	4	+	63849312	63849312	16724991	4	112,76,39,251,	0,5483,8072,9991,
#Partially deleted in new
chr17	63854775	63863005	chr17:63854775-63863005	4	+	63854775	63854775	16724991	7	96,267,321,423,267,243,281,	0,2381,4528,5098,5912,7513,7949,
#Partially deleted in new
chr17	63854819	63859458	chr17:63854819-63859458	4	+	63854819	63854819	16724991	3	52,168,155,	0,2436,4484,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	63857015	63864379	chr17:63857015-63864379	5	+	63857015	63857015	16724991	6	408,321,423,267,243,1655,	0,2288,2858,3672,5273,5709,
#Partially deleted in new
chr17	63857140	63862531	chr17:63857140-63862531	5	+	63857140	63857140	16724991	5	283,321,423,267,243,	0,2163,2733,3547,5148,
#Partially deleted in new
chr17	63860188	63862918	chr17:63860188-63862918	4	+	63860188	63860188	16724991	3	108,243,194,	0,2100,2536,
#Deleted in new
chr17	63872011	63873766	chr17:63872011-63873766	1	-	63872528	63873614	789624	4	730,120,161,162,	0,823,1167,1593,
#Deleted in new
chr17	63872011	63873729	chr17:63872011-63873729	1	-	63872125	63873614	789624	3	312,161,125,	0,1167,1593,
#Deleted in new
chr17	63872011	63873766	chr17:63872011-63873766	3	-	63872125	63873614	789624	5	312,165,120,161,162,	0,565,823,1167,1593,
#Deleted in new
chr17	63872011	63873766	chr17:63872011-63873766	1	-	63872125	63873614	789624	5	312,165,47,63,162,	0,565,823,1265,1593,
#Deleted in new
chr17	63872014	63873676	chr17:63872014-63873676	1	-	63872125	63872858	789624	4	309,165,120,72,	0,562,820,1590,
#Deleted in new
chr17	63872025	63873685	chr17:63872025-63873685	0	-	63872025	63872025	8553170	1	1660,	0,
#Deleted in new
chr17	63872046	63873707	chr17:63872046-63873707	0	-	63872046	63872046	8553170	3	908,161,103,	0,1132,1558,
#Deleted in new
chr17	63880214	63881863	chr17:63880214-63881863	3	-	63880320	63881801	789624	4	304,165,161,72,	0,557,1144,1577,
#Deleted in new
chr17	63880217	63881863	chr17:63880217-63881863	1	-	63880320	63881801	789624	5	301,165,120,161,72,	0,554,811,1141,1574,
#Deleted in new
chr17	63880217	63881842	chr17:63880217-63881842	1	-	63880320	63881801	789624	5	301,165,75,161,51,	0,554,811,1141,1574,
#Deleted in new
chr17	63880217	63881842	chr17:63880217-63881842	1	-	63880232	63881801	789624	5	301,161,120,161,51,	0,558,811,1141,1574,
#Deleted in new
chr17	63880223	63881935	chr17:63880223-63881935	1	-	63880456	63881801	789624	4	713,120,161,144,	0,805,1135,1568,
#Deleted in new
chr17	63885850	63886051	chr17:63885850-63886051	7	+	63885850	63885850	16724991	1	201,	0,
#Deleted in new
chr17	63894908	63896661	chr17:63894908-63896661	1	-	63895021	63896511	789624	3	311,161,160,	0,1166,1593,
#Deleted in new
chr17	63894917	63896653	chr17:63894917-63896653	3	-	63895021	63896511	0	5	302,165,120,161,152,	0,555,813,1157,1584,
#Deleted in new
chr17	63894926	63896582	chr17:63894926-63896582	1	-	63895157	63896511	789624	4	711,120,161,81,	0,804,1148,1575,
#Deleted in new
chr17	63894930	63896609	chr17:63894930-63896609	0	-	63894930	63894930	8553170	2	707,879,	0,800,
#Deleted in new
chr17	63894993	63896570	chr17:63894993-63896570	1	-	63895021	63895754	789624	4	226,165,120,69,	0,479,737,1508,
#Deleted in new
chr17	63895830	63896661	chr17:63895830-63896661	0	-	63895830	63895830	8553170	2	405,160,	0,671,
#Deleted in new
chr17	63900642	63900879	chr17:63900642-63900879	7	+	63900642	63900642	16724991	1	237,	0,
#Deleted in new
chr17	63909596	63911289	chr17:63909596-63911289	1	-	63909846	63911196	789624	3	730,47,103,	0,823,1590,
#Deleted in new
chr17	63909599	63911341	chr17:63909599-63911341	1	-	63909710	63911196	789624	5	309,165,47,63,155,	0,562,820,1262,1587,
#Partially deleted in new
chr17	63909603	63918838	chr17:63909603-63918838	1	-	63909710	63918776	789624	5	305,165,120,161,72,	0,558,816,1160,9163,
#Deleted in new
chr17	63909604	63911236	chr17:63909604-63911236	1	-	63909710	63911196	789624	4	304,165,47,50,	0,557,815,1582,
#Deleted in new
chr17	63909606	63911258	chr17:63909606-63911258	1	-	63909710	63910443	789624	4	302,165,120,72,	0,555,813,1580,
#Deleted in new
chr17	63909615	63911328	chr17:63909615-63911328	1	-	63909846	63910443	789624	3	711,120,142,	0,804,1571,
#Deleted in new
chr17	63909616	63911299	chr17:63909616-63911299	0	-	63909616	63909616	8553170	2	710,880,	0,803,
#Deleted in new
chr17	63909632	63911234	chr17:63909632-63911234	0	-	63909632	63909632	8553170	1	1602,	0,
#Deleted in new
chr17	63909651	63911247	chr17:63909651-63911247	0	-	63909651	63909651	8553170	3	257,763,61,	0,510,1535,
#Deleted in new
chr17	63909710	63911196	chr17:63909710-63911196	3	-	63909710	63911196	789624	5	198,165,116,180,10,	0,451,709,1034,1476,
#Partially deleted in new
chr17	63917199	63918818	chr17:63917199-63918818	1	-	63917308	63918776	0	4	307,165,161,52,	0,560,1146,1567,
#Partially deleted in new
chr17	63917202	63918819	chr17:63917202-63918819	3	-	63917308	63918776	0	5	304,165,120,161,53,	0,557,814,1143,1564,
#Partially deleted in new
chr17	63917202	63918838	chr17:63917202-63918838	1	-	63917308	63918776	789624	3	304,161,72,	0,1143,1564,
#Partially deleted in new
chr17	63917202	63918817	chr17:63917202-63918817	1	-	63917308	63918776	0	5	304,165,75,161,51,	0,557,814,1143,1564,
#Partially deleted in new
chr17	63917202	63918838	chr17:63917202-63918838	1	-	63917423	63918776	789624	2	304,72,	0,1564,
#Partially deleted in new
chr17	63917202	63931385	chr17:63917202-63931385	3	-	63917308	63931385	8553170	8	304,165,120,161,76,42,119,51,	0,557,814,1143,12046,12231,12567,14132,
#Partially deleted in new
chr17	63917493	63918668	chr17:63917493-63918668	0	-	63917493	63917493	8553170	3	13,165,652,	0,266,523,
#Partially deleted in new
chr17	63928739	63932354	chr17:63928739-63932354	3	-	63929225	63932261	0	6	585,42,119,312,51,160,	0,694,1030,1334,2595,3455,
#Partially deleted in new
chr17	63928739	63932336	chr17:63928739-63932336	1	-	63929225	63932261	0	6	585,42,119,312,54,142,	0,694,1030,1334,2595,3455,
#Deleted in new
chr17	63928767	63930514	chr17:63928767-63930514	0	-	63928767	63928767	8553170	4	557,42,119,441,	0,666,1002,1306,
#Partially deleted in new
chr17	63929225	63932261	chr17:63929225-63932261	1	-	63929225	63932261	0	5	99,42,119,51,67,	0,208,544,2109,2969,
#Partially deleted in new
chr17	63930959	63932331	chr17:63930959-63932331	0	-	63930959	63930959	8553170	2	426,137,	0,1235,
#Deleted in new
chr17	63931890	63932323	chr17:63931890-63932323	0	-	63931890	63931890	8553170	1	433,	0,
#Partially deleted in new
chr17	63938553	63972918	chr17:63938553-63972918	3	-	63940770	63972841	789624	24	3440,271,105,138,54,279,123,174,155,136,477,357,174,239,154,210,142,64,333,92,129,90,119,350,	0,4272,5192,6119,6453,6806,8491,9336,10057,10839,12870,18608,20711,22639,25118,25914,27548,27927,29469,32608,33168,33582,33798,34015,
#Deleted in new
chr17	63947953	63949704	chr17:63947953-63949704	0	-	63947953	63947953	8553170	3	110,155,312,	0,657,1439,
#Deleted in new
chr17	63959372	63961693	chr17:63959372-63961693	0	-	63959372	63959372	8553170	2	66,501,	0,1820,
#Partially deleted in new
chr17	63972919	63989422	chr17:63972919-63989422	3	-	63972919	63972919	8553170	3	311,136,55,	0,461,16448,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	63996070	63999899	chr17:63996070-63999899	3	-	63996070	63996070	789624	3	1193,158,1575,	0,1694,2254,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	63996469	63998931	chr17:63996469-63998931	0	-	63996469	63996469	8553170	2	790,99,	0,2363,
#Partially deleted in new
chr17	63998350	64004304	chr17:63998350-64004304	1	+	63998364	64001761	789624	6	74,76,107,227,71,2572,	0,356,617,2733,3116,3382,
#Partially deleted in new
chr17	63998350	64002516	chr17:63998350-64002516	3	+	63998364	64001975	789624	5	74,76,107,225,784,	0,356,617,2733,3382,
#Partially deleted in new
chr17	63998350	64001969	chr17:63998350-64001969	1	+	63998364	64001520	789624	5	74,76,107,71,237,	0,356,617,3116,3382,
#Partially deleted in new
chr17	63998350	64002250	chr17:63998350-64002250	1	+	63998364	64001761	789624	6	74,55,107,227,71,518,	0,377,617,2733,3116,3382,
#Partially deleted in new
chr17	63998350	64002220	chr17:63998350-64002220	1	+	63998984	64001761	789624	5	74,107,227,71,488,	0,617,2733,3116,3382,
#Partially deleted in new
chr17	63998354	64002049	chr17:63998354-64002049	1	+	63998364	64001520	789624	3	70,71,317,	0,3112,3378,
#Partially deleted in new
chr17	63998354	64003113	chr17:63998354-64003113	0	+	63998354	63998354	8553170	5	70,368,227,71,1381,	0,352,2729,3112,3378,
#Partially deleted in new
chr17	63998354	64001753	chr17:63998354-64001753	0	+	63998364	64001753	789624	5	70,55,107,225,21,	0,373,613,2729,3378,
#Partially deleted in new
chr17	63998454	64004285	chr17:63998454-64004285	0	+	63998454	63998454	8553170	4	328,107,71,2553,	0,513,3012,3278,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	64000856	64002493	chr17:64000856-64002493	0	+	64000856	64000856	8553170	1	1637,	0,
#Partially deleted in new
chr17	64002593	64020625	chr17:64002593-64020625	1	-	64002746	64005131	789624	5	332,321,267,41,103,	0,1050,2513,4037,17929,
#Partially deleted in new
chr17	64002593	64020625	chr17:64002593-64020625	1	-	64002746	64006691	789624	6	332,321,145,50,105,103,	0,1050,2513,2730,4037,17929,
#Partially deleted in new
chr17	64002593	64020625	chr17:64002593-64020625	0	-	64003894	64006691	789624	5	332,321,31,105,103,	0,1050,2513,4037,17929,
#Partially deleted in new
chr17	64002594	64006932	chr17:64002594-64006932	1	-	64002746	64006691	0	4	331,321,267,302,	0,1049,2512,4036,
#Partially deleted in new
chr17	64002595	64020634	chr17:64002595-64020634	1	-	64002746	64006691	0	6	330,321,267,105,82,229,	0,1048,2511,4035,5145,17810,
#Partially deleted in new
chr17	64002595	64020634	chr17:64002595-64020634	3	-	64002746	64006691	0	5	330,321,267,105,229,	0,1048,2511,4035,17810,
#Partially deleted in new
chr17	64002595	64020602	chr17:64002595-64020602	1	-	64002746	64006691	0	5	330,321,267,105,80,	0,1048,2511,4035,17927,
#Partially deleted in new
chr17	64002631	64020607	chr17:64002631-64020607	1	-	64002746	64006691	0	6	294,321,267,105,82,85,	0,1012,2475,3999,5109,17891,
#Partially deleted in new
chr17	64003643	64020579	chr17:64003643-64020579	0	-	64003643	64006691	789624	5	321,267,105,82,174,	0,1463,2987,4097,16762,
#Partially deleted in new
chr17	64003648	64020551	chr17:64003648-64020551	0	-	64003648	64006691	789624	4	316,267,101,29,	0,1458,2982,16874,
#Partially deleted in new
chr17	64003792	64020579	chr17:64003792-64020579	0	-	64003792	64006691	789624	4	172,267,105,174,	0,1314,2838,16613,
#Partially deleted in new
chr17	64003869	64020618	chr17:64003869-64020618	0	-	64003869	64003869	8553170	5	95,166,267,105,96,	0,180,1237,2761,16653,
#Partially deleted in new
chr17	64004254	64020595	chr17:64004254-64020595	0	-	64004254	64004254	8553170	3	1119,105,73,	0,2376,16268,
#Partially deleted in new
chr17	64004926	64006769	chr17:64004926-64006769	0	-	64004926	64004926	8553170	2	447,139,	0,1704,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	64005938	64020632	chr17:64005938-64020632	0	-	64005938	64005938	8553170	2	797,110,	0,14584,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr17	64039141	64130125	chr17:64039141-64130125	3	-	64043987	64130029	0	22	5059,68,124,128,148,200,100,190,91,274,192,119,166,79,262,102,123,73,73,34,121,150,	0,5718,6217,8716,9913,13638,14130,15108,15596,16533,18660,21327,24844,26067,27529,29048,32839,36033,40520,41633,58979,90834,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	64053966	64054767	chr17:64053966-64054767	0	-	64053966	64053966	8553170	2	473,30,	0,771,
#Partially deleted in new
chr17	64060575	64066984	chr17:64060575-64066984	0	-	64060575	64060575	8553170	4	12,166,79,314,	0,3410,4633,6095,
#Partially deleted in new
chr17	64067859	64072096	chr17:64067859-64072096	0	-	64067859	64067859	8553170	2	432,116,	0,4121,
#Partially deleted in new
chr17	64068236	64080474	chr17:64068236-64080474	0	-	64068236	64068236	8553170	5	55,123,73,73,74,	0,3744,6938,11425,12164,
#Partially deleted in new
chr17	64075076	64130142	chr17:64075076-64130142	0	-	64075076	64075076	8553170	5	171,73,34,121,167,	0,4585,5698,23044,54899,
#Partially deleted in new
chr17	64097887	64130144	chr17:64097887-64130144	0	-	64097887	64097887	8553170	2	354,169,	0,32088,
#Deleted in new
chr17	64128751	64130819	chr17:64128751-64130819	1	-	64129816	64130029	0	1	2068,	0,
#Deleted in new
chr17	64145969	64146309	chr17:64145969-64146309	0	+	64145969	64145969	789624	2	26,80,	0,260,
#Deleted in new
chr17	64145969	64146476	chr17:64145969-64146476	3	+	64145969	64145969	8553170	2	31,247,	0,260,
#Deleted in new
chr17	64146082	64146152	chr17:64146082-64146152	3	+	64146082	64146082	789624	1	70,	0,
#Deleted in new
chr17	64146336	64146471	chr17:64146336-64146471	3	+	64146336	64146336	8553170	1	135,	0,
#Deleted in new
chr17	64146338	64146471	chr17:64146338-64146471	3	+	64146338	64146338	5263520	1	133,	0,
#Partially deleted in new
chr17	64147226	64263227	chr17:64147226-64263227	3	-	64148968	64214217	789624	12	1865,121,210,126,133,100,147,269,331,201,1669,60,	0,3614,5718,7615,13574,23873,30098,40941,46332,47668,65347,115941,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	64147440	64156234	chr17:64147440-64156234	0	-	64147440	64147440	8553170	3	3521,210,1393,	0,5504,7401,
#Partially deleted in new
chr17	64147673	64230756	chr17:64147673-64230756	1	-	64148968	64214217	789624	12	1418,121,210,126,133,100,147,248,331,201,1669,148,	0,3167,5271,7168,13127,23426,29651,40494,45885,47221,64900,82935,
#Partially deleted in new
chr17	64147673	64230756	chr17:64147673-64230756	1	-	64148968	64214217	789624	14	1418,121,210,126,133,100,147,237,12,3,327,201,1669,148,	0,3167,5271,7168,13127,23426,29651,40494,40732,40745,45889,47221,64900,82935,
#Partially deleted in new
chr17	64147686	64263301	chr17:64147686-64263301	1	-	64148968	64214217	789624	12	1405,121,210,126,133,100,147,248,331,201,1669,134,	0,3154,5258,7155,13114,23413,29638,40481,45872,47208,64887,115481,
#Partially deleted in new
chr17	64148882	64212719	chr17:64148882-64212719	0	-	64148968	64212719	789624	11	209,121,210,120,133,100,147,248,331,201,146,	0,1958,4062,5959,11918,22217,28442,39285,44676,46012,63691,
#Partially deleted in new
chr17	64150843	64155220	chr17:64150843-64155220	0	-	64150843	64150843	8553170	4	118,210,126,107,	0,2101,3998,4270,
#Partially deleted in new
chr17	64154946	64188454	chr17:64154946-64188454	0	-	64154946	64154946	8553170	4	21,100,147,287,	0,16153,22378,33221,
#Partially deleted in new
chr17	64214060	64256091	chr17:64214060-64256091	0	-	64214060	64214217	789624	2	182,381,	0,41650,
#Partially deleted in new
chr17	64214089	64263247	chr17:64214089-64263247	0	-	64214089	64214217	789624	4	153,108,117,80,	0,25067,28171,49078,
#Deleted in new
chr17	64308315	64308690	chr17:64308315-64308690	7	-	64308315	64308315	16724991	1	375,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr17	64319414	64390878	chr17:64319414-64390878	3	-	64323815	64390665	0	16	4431,23,57,63,54,74,28,108,288,276,249,276,306,294,27,277,	0,10285,22219,28845,30965,32975,34076,35518,36696,40725,43734,50335,55636,58409,71074,71187,
#Partially deleted in new
chr17	64363285	64370245	chr17:64363285-64370245	0	-	64363285	64363285	8553170	3	112,276,93,	0,6464,6867,
#Partially deleted in new
chr17	64363347	64370415	chr17:64363347-64370415	0	-	64363347	64363347	8553170	3	50,276,205,	0,6402,6863,
#Partially deleted in new
chr17	64375050	64413776	chr17:64375050-64413776	0	-	64375050	64390665	789624	5	306,294,27,162,63,	0,2773,15438,15551,38663,
#Partially deleted in new
chr17	64375175	64390592	chr17:64375175-64390592	0	-	64375175	64390564	789624	3	181,294,104,	0,2648,15313,
#Partially deleted in new
chr17	64375186	64379092	chr17:64375186-64379092	0	-	64375186	64375186	8553170	3	170,294,120,	0,2637,3786,
#Partially deleted in new
chr17	64375187	64378867	chr17:64375187-64378867	0	-	64375187	64375187	8553170	3	169,294,70,	0,2636,3610,
#Partially deleted in new
chr17	64375337	64398391	chr17:64375337-64398391	0	-	64375337	64390665	789624	5	19,294,27,162,78,	0,2486,15151,15264,22976,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	64377573	64378874	chr17:64377573-64378874	0	-	64377573	64377573	8553170	2	544,77,	0,1224,
#Partially deleted in new
chr17	64390157	64390263	chr17:64390157-64390263	3	-	64390157	64390157	8553170	1	106,	0,
#Partially deleted in new
chr17	64449036	64467649	chr17:64449036-64467649	1	+	64449168	64467617	789624	9	187,42,270,285,111,90,57,69,85,	0,277,3560,8363,11785,16415,17405,17557,18528,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	64449114	64468642	chr17:64449114-64468642	3	+	64449168	64467617	789624	10	109,42,270,285,111,90,57,69,81,333,	0,199,3482,8285,11707,16337,17327,17479,18450,19195,
#Partially deleted in new
chr17	64449129	64457592	chr17:64449129-64457592	0	+	64449168	64457592	789624	4	94,42,270,193,	0,184,3467,8270,
#Partially deleted in new
chr17	64449168	64467617	chr17:64449168-64467617	1	+	64449168	64467617	789624	8	55,42,285,111,90,57,69,53,	0,145,8231,11653,16283,17273,17425,18396,
#Partially deleted in new
chr17	64449168	64467617	chr17:64449168-64467617	1	+	64449168	64467617	789624	8	55,42,270,111,90,57,69,53,	0,145,3428,11653,16283,17273,17425,18396,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	64465451	64468643	chr17:64465451-64468643	0	+	64465451	64467617	789624	5	90,57,69,81,334,	0,990,1142,2113,2858,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	64465451	64467935	chr17:64465451-64467935	0	+	64465451	64467617	789624	4	90,57,69,371,	0,990,1142,2113,
#Partially deleted in new
chr17	64477784	64497036	chr17:64477784-64497036	3	-	64477822	64496968	0	8	204,101,81,141,174,106,127,630,	0,2504,5134,7943,13011,14882,15110,18622,
#Partially deleted in new
chr17	64477786	64492720	chr17:64477786-64492720	0	-	64477982	64492720	789624	5	202,81,141,174,54,	0,5132,7941,13009,14880,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	64477963	64487474	chr17:64477963-64487474	0	-	64477963	64477963	8553170	5	25,101,81,141,577,	0,2325,4955,7764,8934,
#Partially deleted in new
chr17	64480288	64490969	chr17:64480288-64490969	0	-	64480288	64480288	8553170	4	101,56,141,174,	0,2630,5439,10507,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	64480347	64484230	chr17:64480347-64484230	0	-	64480347	64480347	8553170	3	42,201,267,	0,898,3616,
#Partially deleted in new
chr17	64481323	64485794	chr17:64481323-64485794	0	-	64481323	64481323	8553170	3	123,81,67,	0,1595,4404,
#Partially deleted in new
chr17	64485157	64497019	chr17:64485157-64497019	0	-	64485157	64485157	8553170	5	711,174,106,127,613,	0,5638,7509,7737,11249,
#Partially deleted in new
chr17	64486988	64492910	chr17:64486988-64492910	0	-	64486988	64486988	8553170	4	80,174,106,16,	0,3807,5678,5906,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	64490468	64493021	chr17:64490468-64493021	0	-	64490468	64490468	8553170	4	209,174,106,127,	0,327,2198,2426,
#Partially deleted in new
chr17	64490861	64496755	chr17:64490861-64496755	0	-	64492999	64496755	789624	4	108,106,127,224,	0,1805,2033,5670,
#Deleted in new
chr17	64491522	64491789	chr17:64491522-64491789	7	+	64491522	64491522	16724991	1	267,	0,
#Deleted in new
chr17	64499615	64506521	chr17:64499615-64506521	3	-	64499922	64506119	0	13	711,225,60,62,111,173,161,142,66,134,97,166,446,	0,933,2394,2546,2823,3310,3572,3814,4187,4367,4606,5061,6460,
#Deleted in new
chr17	64499615	64506289	chr17:64499615-64506289	0	-	64504035	64506119	789624	12	711,225,60,62,111,173,161,142,66,134,166,214,	0,933,2394,2546,2823,3310,3572,3814,4187,4367,5061,6460,
#Deleted in new
chr17	64499615	64506289	chr17:64499615-64506289	0	-	64499615	64499615	8553170	12	711,1521,62,111,173,161,142,66,134,97,166,214,	0,933,2546,2823,3310,3572,3814,4187,4367,4606,5061,6460,
#Deleted in new
chr17	64499615	64506289	chr17:64499615-64506289	0	-	64504245	64506119	789624	12	711,225,60,62,111,173,161,142,66,134,97,214,	0,933,2394,2546,2823,3310,3572,3814,4187,4367,4606,6460,
#Deleted in new
chr17	64499621	64506287	chr17:64499621-64506287	1	-	64499922	64506119	0	12	705,225,60,62,111,173,161,142,14,46,166,212,	0,927,2388,2540,2817,3304,3566,3808,4181,4651,5055,6454,
#Deleted in new
chr17	64499913	64505956	chr17:64499913-64505956	1	-	64499922	64505789	789624	13	413,225,60,62,111,173,161,142,66,134,97,166,211,	0,635,2096,2248,2525,3012,3274,3516,3889,4069,4308,4763,5832,
#Deleted in new
chr17	64500109	64501902	chr17:64500109-64501902	0	-	64500109	64500109	8553170	4	217,225,87,642,	0,439,947,1151,
#Deleted in new
chr17	64500133	64502350	chr17:64500133-64502350	0	-	64500133	64500133	8553170	4	193,225,60,189,	0,415,1876,2028,
#Deleted in new
chr17	64500184	64501697	chr17:64500184-64501697	0	-	64500184	64500184	8553170	3	142,225,225,	0,364,1288,
#Deleted in new
chr17	64500773	64500839	chr17:64500773-64500839	3	-	64500773	64500773	5263520	1	66,	0,
#Deleted in new
chr17	64500823	64503096	chr17:64500823-64503096	0	-	64500823	64500823	8553170	5	59,60,62,111,171,	0,1186,1338,1615,2102,
#Deleted in new
chr17	64501213	64501313	chr17:64501213-64501313	3	-	64501213	64501213	5263520	1	100,	0,
#Deleted in new
chr17	64501875	64503246	chr17:64501875-64503246	0	-	64501875	64501875	8553170	4	194,388,173,59,	0,286,1050,1312,
#Deleted in new
chr17	64501887	64502902	chr17:64501887-64502902	0	-	64501887	64501887	8553170	2	182,741,	0,274,
#Deleted in new
chr17	64502069	64503435	chr17:64502069-64503435	0	-	64502428	64503435	789624	4	480,173,161,6,	0,856,1118,1360,
#Deleted in new
chr17	64502584	64503823	chr17:64502584-64503823	0	-	64502921	64503823	789624	4	514,161,142,21,	0,603,845,1218,
#Deleted in new
chr17	64502729	64503848	chr17:64502729-64503848	0	-	64502729	64502729	8553170	3	619,142,46,	0,700,1073,
#Deleted in new
chr17	64502899	64503561	chr17:64502899-64503561	0	-	64502899	64502899	8553170	2	199,374,	0,288,
#Deleted in new
chr17	64502920	64503646	chr17:64502920-64503646	0	-	64502920	64502920	8553170	3	178,161,217,	0,267,509,
#Deleted in new
chr17	64502929	64503684	chr17:64502929-64503684	0	-	64502929	64502929	8553170	3	169,161,255,	0,258,500,
#Deleted in new
chr17	64502964	64504021	chr17:64502964-64504021	0	-	64502964	64502964	8553170	3	607,66,39,	0,838,1018,
#Deleted in new
chr17	64503094	64506323	chr17:64503094-64506323	0	-	64503254	64506119	789624	5	4,111,46,166,248,	0,93,1178,1582,2981,
#Deleted in new
chr17	64503254	64506292	chr17:64503254-64506292	1	-	64503254	64506119	789624	4	44,46,166,217,	0,1018,1422,2821,
#Deleted in new
chr17	64503440	64506731	chr17:64503440-64506731	0	-	64503440	64506119	789624	7	131,66,134,97,166,184,218,	0,362,542,781,1236,2635,3073,
#Deleted in new
chr17	64503567	64506626	chr17:64503567-64506626	0	-	64503567	64504108	789624	6	4,66,134,97,166,113,	0,235,415,654,1109,2946,
#Deleted in new
chr17	64503719	64504289	chr17:64503719-64504289	0	-	64503719	64503719	8553170	2	397,68,	0,502,
#Deleted in new
chr17	64503838	64506903	chr17:64503838-64506903	0	-	64503838	64504108	789624	5	30,134,97,166,149,	0,144,383,838,2916,
#Deleted in new
chr17	64503855	64505390	chr17:64503855-64505390	0	-	64503855	64504108	789624	5	13,134,97,166,172,	0,127,366,821,1363,
#Deleted in new
chr17	64503994	64505596	chr17:64503994-64505596	0	-	64503994	64505596	789624	4	122,97,166,158,	0,227,682,1444,
#Deleted in new
chr17	64504014	64505451	chr17:64504014-64505451	0	-	64504014	64504108	789624	4	102,97,166,166,	0,207,662,1271,
#Deleted in new
chr17	64504059	64506289	chr17:64504059-64506289	0	-	64504059	64504108	789624	4	57,97,204,214,	0,162,617,2016,
#Deleted in new
chr17	64504063	64506686	chr17:64504063-64506686	0	-	64504063	64506119	789624	5	53,97,166,187,173,	0,158,613,2012,2450,
#Deleted in new
chr17	64504077	64505281	chr17:64504077-64505281	0	-	64504077	64504108	789624	4	39,97,166,241,	0,144,599,963,
#Deleted in new
chr17	64504357	64506289	chr17:64504357-64506289	0	-	64504357	64504357	8553170	2	485,214,	0,1718,
#Deleted in new
chr17	64504754	64507530	chr17:64504754-64507530	0	-	64504754	64506119	789624	3	88,187,776,	0,1321,2000,
#Partially deleted in new
chr17	64506587	64537942	chr17:64506587-64537942	3	+	64507097	64537779	789624	20	529,129,108,111,106,116,126,194,113,130,154,140,93,133,170,75,153,147,72,340,	0,2004,3585,7660,10135,12733,14814,16114,19182,19483,20523,22700,24338,25302,26251,26529,27997,30014,30453,31015,
#Deleted in new
chr17	64506799	64507712	chr17:64506799-64507712	0	-	64506799	64506799	8553170	2	515,235,	0,678,
#Partially deleted in new
chr17	64506864	64522754	chr17:64506864-64522754	0	+	64507097	64519427	789624	7	252,129,108,111,116,126,53,	0,1727,3308,7383,12456,14537,15837,
#Deleted in new
chr17	64506926	64508199	chr17:64506926-64508199	0	-	64506926	64506926	8553170	2	388,143,	0,1130,
#Partially deleted in new
chr17	64506974	64521474	chr17:64506974-64521474	0	+	64519339	64521474	789624	6	142,25,108,111,116,73,	0,1721,3198,7273,12346,14427,
#Partially deleted in new
chr17	64507010	64514807	chr17:64507010-64514807	1	+	64507097	64514462	789624	4	106,129,108,560,	0,1581,3162,7237,
#Partially deleted in new
chr17	64507039	64537942	chr17:64507039-64537942	1	+	64507097	64537779	789624	21	77,129,108,41,97,126,194,113,130,154,140,97,23,69,37,170,75,153,147,72,340,	0,1552,3133,7189,12300,14362,15662,18730,19031,20071,22248,23886,24850,24875,24946,25799,26077,27545,29562,30001,30563,
#Partially deleted in new
chr17	64507084	64537946	chr17:64507084-64537946	0	+	64507097	64514272	789624	20	32,129,108,130,106,116,126,194,113,130,154,140,97,133,170,75,153,147,72,344,	0,1507,3088,7144,9638,12236,14317,15617,18685,18986,20026,22203,23841,24805,25754,26032,27500,29517,29956,30518,
#Partially deleted in new
chr17	64510242	64516089	chr17:64510242-64516089	0	+	64510242	64515787	789624	3	38,111,367,	0,4005,5480,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	64519320	64525834	chr17:64519320-64525834	0	+	64519320	64521417	789624	5	116,91,126,194,65,	0,1165,2081,3381,6449,
#Partially deleted in new
chr17	64526074	64531928	chr17:64526074-64531928	0	+	64526074	64526074	8553170	5	126,154,140,97,39,	0,1036,3213,4851,5815,
#Partially deleted in new
chr17	64526096	64531101	chr17:64526096-64531101	0	+	64526096	64526096	8553170	4	104,154,140,176,	0,1014,3191,4829,
#Partially deleted in new
chr17	64526165	64531964	chr17:64526165-64531964	0	+	64526165	64531964	789624	4	35,154,140,75,	0,945,3122,5724,
#Partially deleted in new
chr17	64527039	64531101	chr17:64527039-64531101	0	+	64527039	64527039	8553170	3	225,140,176,	0,2248,3886,
#Partially deleted in new
chr17	64527134	64532085	chr17:64527134-64532085	0	+	64527134	64527134	8553170	4	130,140,97,196,	0,2153,3791,4755,
#Partially deleted in new
chr17	64529348	64532211	chr17:64529348-64532211	0	+	64529348	64529348	8553170	3	79,93,322,	0,1577,2541,
#Partially deleted in new
chr17	64532700	64534643	chr17:64532700-64534643	0	+	64532700	64532700	8553170	3	308,75,59,	0,416,1884,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	64532987	64537951	chr17:64532987-64537951	0	+	64532987	64532987	8553170	5	21,75,2164,72,349,	0,129,1597,4053,4615,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	64534015	64537948	chr17:64534015-64537948	0	+	64534015	64534015	8553170	2	2733,908,	0,3025,
#Partially deleted in new
chr17	64536601	64542461	chr17:64536601-64542461	0	+	64536601	64542163	789624	3	147,72,388,	0,439,5472,
#Partially deleted in new
chr17	64536858	64537946	chr17:64536858-64537946	0	+	64536858	64536858	8553170	2	254,344,	0,744,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr17	64542294	64661897	chr17:64542294-64661897	0	-	64594097	64661880	789624	19	3653,76,202,121,138,179,115,104,196,159,85,203,84,85,66,134,114,109,69,	0,3968,5305,9289,12561,13525,15313,19205,20476,29503,36197,38494,41166,43791,48789,51145,51696,56087,119534,
#Partially deleted in new
chr17	64545067	64661928	chr17:64545067-64661928	0	-	64594097	64661880	789624	19	880,76,202,121,138,179,115,104,196,159,85,203,84,66,134,114,109,39,100,	0,1195,2532,6516,9788,10752,12540,16432,17703,26730,33424,35721,38393,46016,48372,48923,53314,61534,116761,
#Partially deleted in new
chr17	64545364	64662068	chr17:64545364-64662068	3	-	64545847	64661880	0	19	583,76,202,121,138,179,115,104,196,159,85,203,84,85,66,134,109,39,240,	0,898,2235,6219,9491,10455,12243,16135,17406,26433,33127,35424,38096,40721,45719,48075,53017,61237,116464,
#Partially deleted in new
chr17	64554880	64661912	chr17:64554880-64661912	0	-	64554880	64661880	789624	14	113,179,115,104,196,159,85,203,84,85,66,134,109,84,	0,939,2727,6619,7890,16917,23611,25908,28580,31205,36203,38559,43501,106948,
#Partially deleted in new
chr17	64557640	64563165	chr17:64557640-64563165	0	-	64557640	64557640	8553170	3	82,104,395,	0,3859,5130,
#Deleted in new
chr17	64572828	64573081	chr17:64572828-64573081	7	+	64572828	64572828	16724991	1	253,	0,
#Partially deleted in new
chr17	64593014	64598445	chr17:64593014-64598445	0	-	64593014	64593014	8553170	2	559,64,	0,5367,
#Deleted in new
chr17	64747263	64747492	chr17:64747263-64747492	7	-	64747263	64747263	16724991	1	229,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	64749662	64781626	chr17:64749662-64781626	3	-	64749662	64749662	789624	12	346,130,150,160,234,138,98,132,356,98,697,193,	0,931,2144,4342,4758,8579,8866,12253,12692,14788,30680,31771,
#Partially deleted in new
chr17	64749917	64758603	chr17:64749917-64758603	7	-	64749917	64749917	16724991	6	91,150,160,234,138,75,	0,1889,4087,4503,8324,8611,
#Deleted in new
chr17	64750419	64751311	chr17:64750419-64751311	7	+	64750419	64750419	16724991	1	892,	0,
#Deleted in new
chr17	64761911	64762710	chr17:64761911-64762710	7	-	64761911	64761911	16724991	2	136,356,	0,443,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	64762686	64781707	chr17:64762686-64781707	0	-	64762686	64762686	8553170	5	24,98,225,697,274,	0,1764,17294,17656,18747,
#Deleted in new
chr17	64778841	64778937	chr17:64778841-64778937	7	-	64778841	64778841	16724991	1	96,	0,
#Partially deleted in new
chr17	64779258	64837139	chr17:64779258-64837139	7	-	64779258	64779258	16724991	18	76,255,225,697,183,138,146,158,64,194,146,918,271,286,140,248,89,84,	0,156,722,1084,2175,3223,5963,7308,7989,13090,18005,20741,25571,42508,42995,45366,49902,57797,
#Deleted in new
chr17	64780758	64780824	chr17:64780758-64780824	3	+	64780758	64780758	5263520	1	66,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	64782718	64837154	chr17:64782718-64837154	5	-	64782718	64782718	16724991	11	2649,158,64,194,146,918,271,286,140,89,99,	0,3848,4529,9630,14545,17281,22111,39048,39535,46442,54337,
#Partially deleted in new
chr17	64785258	64829208	chr17:64785258-64829208	5	-	64785258	64785258	16724991	11	109,158,64,194,146,918,271,383,627,248,48,	0,1308,1989,7090,12005,14741,19571,29604,36508,39366,43902,
#Partially deleted in new
chr17	64804841	64837148	chr17:64804841-64837148	4	-	64804841	64804841	16724991	7	259,383,286,140,248,89,93,	0,10021,16925,17412,19783,24319,32214,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	64819795	64837125	chr17:64819795-64837125	4	-	64819795	64819795	16724991	6	725,286,140,248,89,70,	0,1971,2458,4829,9365,17260,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	64820693	64837136	chr17:64820693-64837136	4	-	64820693	64820693	16724991	6	324,286,140,248,89,81,	0,1073,1560,3931,8467,16362,
#Deleted in new
chr17	64822029	64822102	chr17:64822029-64822102	3	-	64822029	64822029	5263520	1	73,	0,
#Deleted in new
chr17	64825764	64825819	chr17:64825764-64825819	3	-	64825764	64825764	8553170	1	55,	0,
#Deleted in new
chr17	64847385	64847728	chr17:64847385-64847728	7	+	64847385	64847385	16724991	1	343,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	64854311	64919468	chr17:64854311-64919468	1	-	64854598	64918865	789624	11	333,50,105,1532,119,75,72,72,72,121,38,	0,1528,4467,5130,8588,14150,14783,35369,38217,64438,65119,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	64854361	64899101	chr17:64854361-64899101	1	-	64854598	64886105	789624	12	283,50,105,1532,119,75,72,81,72,72,72,740,	0,1478,4417,5080,8538,14100,14733,31724,32453,35319,38167,44000,
#Partially deleted in new
chr17	64854363	64863585	chr17:64854363-64863585	1	-	64854598	64863002	789624	5	281,50,105,1532,686,	0,1476,4415,5078,8536,
#Partially deleted in new
chr17	64854369	64897660	chr17:64854369-64897660	1	-	64854598	64897257	789624	12	275,50,105,1532,119,75,72,81,72,72,72,3012,	0,1470,4409,5072,8530,14092,14725,31716,32445,35311,38159,40279,
#Partially deleted in new
chr17	64854370	64859627	chr17:64854370-64859627	0	-	64854598	64859627	789624	3	274,50,186,	0,1469,5071,
#Partially deleted in new
chr17	64860785	64877030	chr17:64860785-64877030	0	-	64860785	64860785	8553170	5	188,119,75,72,95,	0,2114,7676,8309,16150,
#Partially deleted in new
chr17	64860851	64919480	chr17:64860851-64919480	0	-	64860851	64919453	789624	9	122,119,75,72,81,72,72,72,50,	0,2048,7610,8243,25234,25963,28829,31677,58579,
#Partially deleted in new
chr17	64862932	64894957	chr17:64862932-64894957	0	-	64862932	64894957	789624	6	86,81,72,72,72,309,	0,23153,23882,26748,29596,31716,
#Partially deleted in new
chr17	64868499	64895056	chr17:64868499-64895056	0	-	64868499	64895056	789624	4	37,72,72,408,	0,595,24029,26149,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	64871503	64871784	chr17:64871503-64871784	3	-	64871503	64871503	8553170	1	281,	0,
#Deleted in new
chr17	64881090	64881181	chr17:64881090-64881181	7	+	64881090	64881090	16724991	1	91,	0,
#Deleted in new
chr17	64892727	64892845	chr17:64892727-64892845	7	+	64892727	64892727	16724991	1	118,	0,
#Partially deleted in new
chr17	64892728	64896403	chr17:64892728-64896403	1	+	64892728	64892728	8553170	2	140,419,	0,3256,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	64892800	64901281	chr17:64892800-64901281	0	+	64892800	64892800	8553170	2	68,212,	0,8269,
#Partially deleted in new
chr17	64892823	64910180	chr17:64892823-64910180	3	+	64892823	64892823	8553170	2	45,586,	0,16771,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	64897388	64898608	chr17:64897388-64898608	0	-	64897388	64897388	8553170	2	266,247,	0,973,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	64899765	64900716	chr17:64899765-64900716	3	+	64899765	64899765	8553170	2	413,147,	0,804,
#Deleted in new
chr17	64905882	64906018	chr17:64905882-64906018	7	-	64905882	64905882	16724991	1	136,	0,
#Partially deleted in new
chr17	64927633	64931286	chr17:64927633-64931286	5	+	64927633	64927633	16724991	3	176,193,84,	0,882,3569,
#Duplicated in new
chr17	64927743	64930805	chr17:64927743-64930805	4	+	64927743	64927743	16724991	3	66,110,88,	0,2497,2974,
#Duplicated in new
chr17	64930148	64934203	chr17:64930148-64934203	7	+	64930148	64930148	16724991	4	202,151,85,161,	0,569,1054,3894,
#Partially deleted in new
chr17	64936484	64940229	chr17:64936484-64940229	7	-	64936484	64936484	16724991	2	195,62,	0,3683,
#Partially deleted in new
chr17	64940601	64954177	chr17:64940601-64954177	3	+	64940601	64940601	8553170	2	124,501,	0,13075,
#Deleted in new
chr17	64940605	64940717	chr17:64940605-64940717	7	+	64940605	64940605	16724991	1	112,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	64943261	64951054	chr17:64943261-64951054	3	+	64943261	64943261	8553170	2	2314,160,	0,7633,
#Deleted in new
chr17	64951497	64951609	chr17:64951497-64951609	7	-	64951497	64951497	16724991	1	112,	0,
#Partially deleted in new
chr17	64953682	64956546	chr17:64953682-64956546	7	+	64953682	64953682	16724991	2	811,248,	0,2616,
#Partially deleted in new
chr17	64966549	64975568	chr17:64966549-64975568	7	-	64966549	64966549	16724991	5	1832,129,174,276,1014,	0,5984,6204,6692,8005,
#Partially deleted in new
chr17	64968037	64975576	chr17:64968037-64975576	5	-	64968037	64968037	16724991	4	344,129,764,1022,	0,4496,4716,6517,
#Partially deleted in new
chr17	64968221	64973517	chr17:64968221-64973517	5	-	64968221	64968221	16724991	5	160,111,129,174,276,	0,1093,4312,4532,5020,
#Partially deleted in new
chr17	65010714	65056839	chr17:65010714-65056839	3	-	65014256	65056593	789624	4	4115,51,227,529,	0,7538,42787,45596,
#Partially deleted in new
chr17	65013787	65055774	chr17:65013787-65055774	1	-	65014256	65053726	789624	4	1042,51,227,182,	0,4465,39714,41805,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	65051908	65053308	chr17:65051908-65053308	3	+	65051908	65051908	8553170	2	290,247,	0,1153,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	65100811	65113130	chr17:65100811-65113130	0	+	65100811	65100811	789624	3	231,90,2415,	0,395,9904,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	65100829	65119585	chr17:65100829-65119585	0	+	65100829	65100829	8553170	5	213,90,251,156,434,	0,377,9886,16225,18322,
#Partially deleted in new
chr17	65100877	65111113	chr17:65100877-65111113	0	+	65100877	65100877	8553170	2	165,398,	0,9838,
#Partially deleted in new
chr17	65100985	65227690	chr17:65100985-65227690	1	+	65100985	65227407	789624	19	57,97,51,107,52,59,77,82,72,30,62,114,116,88,139,86,118,485,416,	0,52436,57309,59247,59550,59865,62027,67214,76746,88300,89189,92557,96140,101007,103177,106936,109502,124016,126289,
#Partially deleted in new
chr17	65137430	65158791	chr17:65137430-65158791	0	+	65137430	65137430	8553170	3	167,97,497,	0,15991,20864,
#Partially deleted in new
chr17	65137447	65225588	chr17:65137447-65225588	1	+	65137540	65225490	789624	18	150,97,51,107,52,59,77,82,63,30,62,114,116,88,139,86,118,587,	0,15974,20847,22785,23088,23403,25565,30752,40284,51838,52727,56095,59678,64545,66715,70474,73040,87554,
#Partially deleted in new
chr17	65137453	65227678	chr17:65137453-65227678	0	+	65137540	65225075	789624	19	144,97,51,107,52,59,77,82,72,30,62,114,116,88,139,90,118,485,404,	0,15968,20841,22779,23082,23397,25559,30746,40278,51832,52721,56089,59672,64539,66709,70468,73034,87548,89821,
#Partially deleted in new
chr17	65137468	65227703	chr17:65137468-65227703	1	+	65137540	65227407	789624	19	129,97,51,107,52,59,77,82,63,30,62,114,116,88,139,86,118,485,429,	0,15953,20826,22764,23067,23382,25544,30731,40263,51817,52706,56074,59657,64524,66694,70453,73019,87533,89806,
#Partially deleted in new
chr17	65137473	65227690	chr17:65137473-65227690	3	+	65137540	65227407	789624	19	124,97,51,107,52,59,77,82,72,30,62,114,116,88,139,86,118,485,416,	0,15948,20821,22759,23062,23377,25539,30726,40258,51812,52701,56069,59652,64519,66689,70448,73014,87528,89801,
#Partially deleted in new
chr17	65137523	65210662	chr17:65137523-65210662	0	+	65137523	65137523	8553170	17	74,97,51,107,52,59,77,82,63,30,62,114,116,88,139,86,175,	0,15898,20771,22709,23012,23327,25489,30676,40208,51762,52651,56019,59602,64469,66639,70398,72964,
#Partially deleted in new
chr17	65137591	65180037	chr17:65137591-65180037	0	+	65137591	65137591	8553170	10	6,97,51,107,52,59,77,82,72,42,	0,15830,20703,22641,22944,23259,25421,30608,40140,42404,
#Deleted in new
chr17	65185318	65185482	chr17:65185318-65185482	7	-	65185318	65185318	16724991	1	164,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	65188703	65227692	chr17:65188703-65227692	0	+	65188703	65188703	8553170	10	612,62,114,116,88,139,86,118,485,418,	0,1471,4839,8422,13289,15459,19218,21784,36298,38571,
#Partially deleted in new
chr17	65528562	65561647	chr17:65528562-65561647	3	-	65529975	65558620	789624	11	1540,168,96,234,195,512,141,103,141,931,198,	0,5349,7063,7757,8306,8761,9640,12892,20957,29243,32887,
#Partially deleted in new
chr17	65528566	65560326	chr17:65528566-65560326	1	-	65528613	65558620	789624	3	134,512,373,	0,29658,31387,
#Partially deleted in new
chr17	65528566	65561647	chr17:65528566-65561647	1	-	65529975	65558620	789624	10	1536,168,96,234,512,141,103,141,931,198,	0,5345,7059,7753,8757,9636,12888,20953,29239,32883,
#Partially deleted in new
chr17	65529880	65558729	chr17:65529880-65558729	1	-	65529975	65558620	789624	9	222,168,96,234,512,141,103,141,924,	0,4031,5745,6439,7443,8322,11574,19639,27925,
#Partially deleted in new
chr17	65533950	65536682	chr17:65533950-65536682	0	-	65533950	65533950	8553170	3	129,96,363,	0,1675,2369,
#Partially deleted in new
chr17	65538101	65641033	chr17:65538101-65641033	3	-	65635970	65641033	789624	7	242,103,141,931,64,65,70,	0,3353,11418,19704,97809,99022,102862,
#Deleted in new
chr17	65557805	65560557	chr17:65557805-65560557	0	-	65557805	65558620	789624	2	931,45,	0,2707,
#Deleted in new
chr17	65558043	65561191	chr17:65558043-65561191	0	-	65558043	65558620	789624	2	693,367,	0,2781,
#Deleted in new
chr17	65558045	65560296	chr17:65558045-65560296	0	-	65558045	65558620	789624	2	691,343,	0,1908,
#Deleted in new
chr17	65558168	65559496	chr17:65558168-65559496	0	-	65558168	65558620	789624	2	568,53,	0,1275,
#Partially deleted in new
chr17	65635537	66192079	chr17:65635537-66192079	3	-	65635970	66183299	789624	27	437,65,102,90,150,63,231,183,108,136,80,60,93,130,155,144,119,100,87,78,48,78,94,173,191,114,83,	0,1586,5426,53591,107530,115124,216266,266614,292044,325925,370152,391963,392775,393585,394331,418198,427425,431240,434377,460713,461047,494208,497132,539506,541292,547656,556459,
#Partially deleted in new
chr17	65635540	66191869	chr17:65635540-66191869	1	-	65635970	66183299	789624	27	434,65,102,90,150,63,231,183,108,136,80,60,93,130,155,144,119,100,87,78,48,78,94,173,191,114,211,	0,1583,5423,53588,107527,115121,216263,266611,292041,325922,370149,391960,392772,393582,394328,418195,427422,431237,434374,460710,461044,494205,497129,539503,541289,547653,556118,
#Partially deleted in new
chr17	65635815	65826543	chr17:65635815-65826543	1	-	65635970	65826299	789624	7	159,65,102,90,150,63,406,	0,1308,5148,53313,107252,114846,190322,
#Partially deleted in new
chr17	65635815	65873661	chr17:65635815-65873661	0	-	65635815	65635815	8553170	9	159,65,102,90,150,63,231,165,25,	0,1308,5148,53313,107252,114846,215988,237141,237821,
#Partially deleted in new
chr17	65635815	65750724	chr17:65635815-65750724	0	-	65635970	65750724	789624	5	159,65,36,150,63,	0,1308,53367,107252,114846,
#Partially deleted in new
chr17	65635815	65826181	chr17:65635815-65826181	0	-	65635815	65635815	789624	6	159,65,102,90,43,44,	0,1308,5148,53313,168577,190322,
#Partially deleted in new
chr17	65635820	65743124	chr17:65635820-65743124	0	-	65661799	65743124	789624	6	154,65,102,79,90,57,	0,1303,5143,25915,53308,107247,
#Partially deleted in new
chr17	65635912	66191697	chr17:65635912-66191697	1	-	65635970	66183299	789624	25	62,65,102,90,150,63,231,183,108,136,80,60,93,130,155,144,119,100,87,78,94,173,191,114,39,	0,1211,5051,53216,107155,114749,215891,266239,291669,325550,369777,391588,392400,393210,393956,417823,427050,430865,434002,493833,496757,539131,540917,547281,555746,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	65636613	65641025	chr17:65636613-65641025	0	-	65637110	65641025	789624	2	575,62,	0,4350,
#Partially deleted in new
chr17	65641057	65873671	chr17:65641057-65873671	0	-	65641057	65641057	8553170	6	8,90,150,63,231,35,	0,48071,102010,109604,210746,232579,
#Deleted in new
chr17	65644307	65644617	chr17:65644307-65644617	7	+	65644307	65644307	16724991	1	310,	0,
#Deleted in new
chr17	65654913	65655395	chr17:65654913-65655395	7	+	65654913	65654913	16724991	1	482,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	65688229	65873648	chr17:65688229-65873648	0	-	65688229	65688229	8553170	6	989,150,63,128,231,145,	0,54838,62432,108931,163574,185274,
#Partially deleted in new
chr17	65743114	65751104	chr17:65743114-65751104	0	-	65743114	65743114	8553170	2	103,443,	0,7547,
#Partially deleted in new
chr17	65750669	65873648	chr17:65750669-65873648	0	-	65750669	65750669	8553170	4	55,128,231,145,	0,46491,101134,122834,
#Partially deleted in new
chr17	65797115	65826294	chr17:65797115-65826294	0	-	65797115	65797115	8553170	2	173,157,	0,29022,
#Partially deleted in new
chr17	65851860	65903315	chr17:65851860-65903315	0	-	65851860	65851860	8553170	3	174,183,224,	0,50291,51231,
#Partially deleted in new
chr17	65851867	65941566	chr17:65851867-65941566	0	-	65851867	65851867	8553170	4	167,183,108,113,	0,50284,75714,89586,
#Partially deleted in new
chr17	65913444	65927649	chr17:65913444-65927649	0	-	65913444	65913444	8553170	2	456,68,	0,14137,
#Partially deleted in new
chr17	66005728	66191855	chr17:66005728-66191855	0	-	66005728	66183299	789624	17	41,60,93,130,155,144,119,100,87,78,48,78,94,173,191,114,197,	0,21772,22584,23394,24140,48007,57234,61049,64186,90522,90856,124017,126941,169315,171101,177465,185930,
#Partially deleted in new
chr17	66176653	66192084	chr17:66176653-66192084	0	-	66176653	66176653	8553170	3	367,114,88,	0,6540,15343,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	66176913	66182415	chr17:66176913-66182415	0	-	66176913	66176955	789624	2	107,449,	0,5053,
#Deleted in new
chr17	66197692	66198238	chr17:66197692-66198238	7	+	66197692	66197692	16724991	1	546,	0,
#Partially deleted in new
chr17	66212032	66229417	chr17:66212032-66229417	3	-	66212132	66229379	0	8	156,198,180,189,77,97,177,102,	0,2420,4755,8521,11665,13995,15987,17283,
#Partially deleted in new
chr17	66212038	66220630	chr17:66212038-66220630	0	-	66212132	66220630	789624	3	150,180,77,	0,4749,8515,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	66267742	66267848	chr17:66267742-66267848	7	+	66267742	66267742	16724991	1	106,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	66278058	66278664	chr17:66278058-66278664	7	+	66278058	66278058	16724991	1	606,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	66302635	66703864	chr17:66302635-66703864	0	+	66302851	66696435	789624	10	389,32,83,112,129,157,135,97,61,538,	0,3460,193565,338719,342747,384475,385666,386315,393791,400691,
#Partially deleted in new
chr17	66302807	66340060	chr17:66302807-66340060	0	+	66302807	66302807	8553170	3	217,32,270,	0,3288,36983,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr17	66302825	66810743	chr17:66302825-66810743	3	+	66302851	66804037	0	17	199,32,83,112,129,157,135,97,138,174,92,63,139,81,108,141,6871,	0,3270,193375,338529,342557,384285,385476,386125,429862,432663,435938,438833,439796,471161,484041,486013,501047,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	66302859	66775127	chr17:66302859-66775127	0	+	66302859	66641464	789624	15	165,32,83,61,112,129,157,135,97,138,174,92,63,139,1141,	0,3236,193341,251659,338495,342523,384251,385442,386091,429828,432629,435904,438799,439762,471127,
#Partially deleted in new
chr17	66302956	66306348	chr17:66302956-66306348	0	+	66302956	66302956	8553170	2	68,253,	0,3139,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	66364028	66364320	chr17:66364028-66364320	3	+	66364028	66364028	8553170	1	292,	0,
#Partially deleted in new
chr17	66398068	66416854	chr17:66398068-66416854	3	-	66398068	66398068	789624	3	150,78,1885,	0,14616,16901,
#Partially deleted in new
chr17	66403637	66414973	chr17:66403637-66414973	0	-	66403637	66403637	8553170	3	534,78,4,	0,9047,11332,
#Deleted in new
chr17	66415567	66416791	chr17:66415567-66416791	0	-	66415567	66415567	8553170	2	218,249,	0,975,
#Deleted in new
chr17	66638270	66638374	chr17:66638270-66638374	3	+	66638270	66638270	8553170	1	104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	66639268	66639383	chr17:66639268-66639383	7	+	66639268	66639268	16724991	1	115,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	66676371	66677404	chr17:66676371-66677404	3	+	66676371	66676371	8553170	3	99,105,280,	0,297,753,
#Deleted in new
chr17	66787071	66787168	chr17:66787071-66787168	3	+	66787071	66787071	5263520	1	97,	0,
#Partially deleted in new
chr17	66835116	66885486	chr17:66835116-66885486	3	+	66877332	66885240	789624	6	134,299,87,141,146,504,	0,42113,43855,45440,49399,49866,
#Partially deleted in new
chr17	66877272	66885278	chr17:66877272-66885278	1	+	66877332	66885240	789624	5	256,87,141,146,296,	0,1699,3284,7243,7710,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	66895490	66895572	chr17:66895490-66895572	7	+	66895490	66895490	16724991	1	82,	0,
#Partially deleted in new
chr17	66964909	67033398	chr17:66964909-67033398	3	+	66964911	67031004	789624	4	222,84,141,2933,	0,53279,59950,65556,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	67019933	67021743	chr17:67019933-67021743	3	-	67019933	67019933	8553170	2	338,122,	0,1688,
#Deleted in new
chr17	67032408	67033290	chr17:67032408-67033290	3	-	67032408	67032408	8553170	2	185,44,	0,838,
#Partially deleted in new
chr17	67044589	67056797	chr17:67044589-67056797	3	+	67044660	67056271	789624	4	300,75,138,753,	0,9406,10513,11455,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr17	67070437	67245183	chr17:67070437-67245183	3	-	67078251	67218804	789624	33	8149,253,517,235,571,80,208,191,52,205,229,184,148,146,119,179,102,180,131,334,268,298,108,199,76,52,57,125,37,228,57,56,36,	0,16391,36731,38054,38678,43886,49967,52532,53525,58213,65532,67493,75305,78131,79429,80608,89823,90459,96040,97025,108221,117881,119151,119719,123529,124981,130691,132881,145461,148157,168995,173346,174710,
#Partially deleted in new
chr17	67077928	67239468	chr17:67077928-67239468	0	-	67128548	67218804	789624	31	658,253,517,235,571,80,208,191,52,361,229,184,148,146,119,179,105,180,131,334,268,298,108,199,76,52,57,125,37,228,36,	0,8900,29240,30563,31187,36395,42476,45041,46034,50566,58041,60002,67814,70640,71938,73117,82332,82968,88549,89534,100730,110390,111660,112228,116038,117490,123200,125390,137970,140666,161504,
#Partially deleted in new
chr17	67077971	67245183	chr17:67077971-67245183	1	-	67078251	67218804	789624	33	615,253,517,235,571,80,208,191,52,205,229,184,148,146,119,179,105,180,131,334,268,298,108,199,76,52,57,125,37,228,57,56,36,	0,8857,29197,30520,31144,36352,42433,44998,45991,50679,57998,59959,67771,70597,71895,73074,82289,82925,88506,89491,100687,110347,111617,112185,115995,117447,123157,125347,137927,140623,161461,165812,167176,
#Partially deleted in new
chr17	67167525	67245187	chr17:67167525-67245187	0	-	67167525	67218804	789624	14	271,268,298,108,199,76,52,57,125,37,228,57,56,40,	0,11133,20793,22063,22631,26441,27893,33603,35793,48373,51069,71907,76258,77622,
#Partially deleted in new
chr17	67167711	67188401	chr17:67167711-67188401	0	-	67167711	67188401	789624	4	85,268,141,83,	0,10947,11884,20607,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	67176320	67188361	chr17:67176320-67188361	0	-	67176320	67176320	8553170	3	349,268,43,	0,2338,11998,
#Deleted in new
chr17	67188217	67189614	chr17:67188217-67189614	0	-	67188217	67188217	8553170	2	399,26,	0,1371,
#Partially deleted in new
chr17	67190188	67245178	chr17:67190188-67245178	0	-	67190188	67190188	8553170	8	167,57,125,37,228,57,56,31,	0,10940,13130,25710,28406,49244,53595,54959,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	67200612	67245172	chr17:67200612-67245172	0	-	67200612	67200612	8553170	7	573,125,37,228,57,56,25,	0,2706,15286,17982,38820,43171,44535,
#Partially deleted in new
chr17	67203379	67245989	chr17:67203379-67245989	0	-	67203379	67218804	789624	6	64,37,228,57,56,175,	0,12519,15215,36053,40404,42435,
#Partially deleted in new
chr17	67215787	67245178	chr17:67215787-67245178	0	-	67215787	67215787	8553170	5	148,228,57,56,31,	0,2807,23645,27996,29360,
#Partially deleted in new
chr17	67218607	67239800	chr17:67218607-67239800	0	-	67218607	67218804	789624	2	215,368,	0,20825,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	67224302	67225541	chr17:67224302-67225541	3	+	67224302	67224302	8553170	2	125,255,	0,984,
#Deleted in new
chr17	67224727	67225041	chr17:67224727-67225041	7	+	67224727	67224727	16724991	1	314,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	67244281	67273503	chr17:67244281-67273503	3	+	67244281	67244281	8553170	5	172,135,225,154,1825,	0,12542,13682,15879,27397,
#Deleted in new
chr17	67244836	67245806	chr17:67244836-67245806	3	+	67244836	67244836	8553170	2	372,317,	0,653,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	67268109	67268228	chr17:67268109-67268228	7	+	67268109	67268109	16724991	1	119,	0,
#Partially deleted in new
chr17	67271468	67271607	chr17:67271468-67271607	3	+	67271468	67271468	8553170	1	139,	0,
#Partially deleted in new
chr17	67276117	67276351	chr17:67276117-67276351	7	-	67276117	67276117	16724991	1	234,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	67337915	67366627	chr17:67337915-67366627	3	-	67340842	67366519	0	11	3137,78,175,113,135,150,105,108,129,60,216,	0,4270,6690,7829,9200,9420,10634,12313,19387,19603,28496,
#Partially deleted in new
chr17	67339802	67366605	chr17:67339802-67366605	1	-	67340842	67366519	0	10	1250,78,175,113,135,150,105,108,129,194,	0,2383,4803,5942,7313,7533,8747,10426,17500,26609,
#Partially deleted in new
chr17	67340773	67366547	chr17:67340773-67366547	0	-	67362871	67366519	789624	13	279,78,175,113,135,150,105,108,129,60,167,117,136,	0,1412,3832,4971,6342,6562,7776,9455,16529,16745,20321,22002,25638,
#Partially deleted in new
chr17	67340974	67342484	chr17:67340974-67342484	0	-	67340974	67340974	8553170	2	78,299,	0,1211,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	67345611	67366568	chr17:67345611-67366568	0	-	67345611	67345611	8553170	8	246,135,150,105,108,129,60,157,	0,1504,1724,2938,4617,11691,11907,20800,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	67350257	67366587	chr17:67350257-67366587	0	-	67350257	67350257	8553170	4	79,82,276,176,	0,5083,7045,16154,
#Partially deleted in new
chr17	67350298	67366577	chr17:67350298-67366577	0	-	67361252	67366519	789624	5	38,129,60,167,166,	0,7004,7220,10796,16113,
#Partially deleted in new
chr17	67357151	67366519	chr17:67357151-67366519	0	-	67357151	67357151	8553170	3	280,60,108,	0,367,9260,
#Partially deleted in new
chr17	67377280	67697261	chr17:67377280-67697261	1	+	67378154	67692577	789624	9	922,149,89,74,96,156,64,119,4690,	0,155521,174976,200903,254862,292227,298198,309785,315291,
#Partially deleted in new
chr17	67377458	67697256	chr17:67377458-67697256	1	+	67378154	67692577	789624	10	744,149,89,8,72,96,156,64,119,4685,	0,155343,174798,176151,200727,254684,292049,298020,309607,315113,
#Partially deleted in new
chr17	67378154	67693013	chr17:67378154-67693013	3	+	67378154	67692888	789624	9	48,149,89,8,72,96,156,64,442,	0,154647,174102,175455,200031,253988,291353,297324,314417,
#Partially deleted in new
chr17	67378965	67578225	chr17:67378965-67578225	0	+	67532822	67578225	789624	5	427,149,89,8,40,	0,153836,173291,174644,199220,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	67408773	67408881	chr17:67408773-67408881	3	-	67408773	67408773	8553170	1	108,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	67457022	67457290	chr17:67457022-67457290	3	-	67457022	67457022	8553170	1	268,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	67457537	67578256	chr17:67457537-67578256	0	+	67532822	67578256	789624	6	286,132,149,89,8,71,	0,2123,75264,94719,96072,120648,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	67471488	67471585	chr17:67471488-67471585	3	+	67471488	67471488	5263520	1	97,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	67471488	67471585	chr17:67471488-67471585	3	-	67471488	67471488	5263520	1	97,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	67524480	67525422	chr17:67524480-67525422	3	+	67524480	67524480	8553170	2	262,350,	0,592,
#Partially deleted in new
chr17	67532904	67632421	chr17:67532904-67632421	0	+	67532904	67532904	8553170	4	46,89,72,279,	0,19352,45281,99238,
#Partially deleted in new
chr17	67553185	67693367	chr17:67553185-67693367	0	+	67553185	67553185	8553170	7	432,72,96,156,64,119,796,	0,25000,78957,116322,122293,133880,139386,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	67611276	67613822	chr17:67611276-67613822	3	+	67611276	67611276	8553170	1	2546,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	67637773	67638973	chr17:67637773-67638973	3	+	67637773	67637773	8553170	1	1200,	0,
#Partially deleted in new
chr17	67717832	67744531	chr17:67717832-67744531	3	+	67717947	67743859	789624	18	256,114,57,149,58,145,189,77,124,89,75,185,126,234,79,93,108,789,	0,1841,2073,3545,4747,6216,8627,16530,18067,18833,19238,19675,20014,20289,21099,21683,25646,25910,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	67717930	67722628	chr17:67717930-67722628	0	+	67717947	67722628	789624	6	158,57,114,57,149,49,	0,1180,1743,1975,3447,4649,
#Partially deleted in new
chr17	67717944	67744202	chr17:67717944-67744202	0	+	67717947	67724097	789624	17	144,114,57,149,145,189,77,124,89,75,185,126,234,79,93,108,460,	0,1729,1961,3433,6104,8515,16418,17955,18721,19126,19563,19902,20177,20987,21571,25534,25798,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	67719385	67721470	chr17:67719385-67721470	0	+	67719385	67719385	8553170	3	402,57,93,	0,520,1992,
#Partially deleted in new
chr17	67721449	67737689	chr17:67721449-67737689	0	+	67721449	67737689	789624	7	77,58,145,189,89,75,182,	0,1130,2599,5010,15216,15621,16058,
#Partially deleted in new
chr17	67724108	67727028	chr17:67724108-67727028	0	+	67724108	67724108	8553170	2	85,569,	0,2351,
#Deleted in new
chr17	67736579	67737971	chr17:67736579-67737971	0	+	67736579	67736579	8553170	4	175,75,185,125,	0,491,928,1267,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	67737038	67744151	chr17:67737038-67744151	0	+	67737038	67737038	8553170	6	107,465,889,93,108,409,	0,469,1083,2477,6440,6704,
#Partially deleted in new
chr17	67739552	67744203	chr17:67739552-67744203	0	+	67739552	67744017	789624	3	56,108,279,	0,3926,4372,
#Partially deleted in new
chr17	67740668	67740799	chr17:67740668-67740799	3	+	67740668	67740668	789624	1	131,	0,
#Partially deleted in new
chr17	67743383	67744151	chr17:67743383-67744151	0	+	67743383	67743383	8553170	2	203,409,	0,359,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	67774590	67777324	chr17:67774590-67777324	7	-	67774590	67774590	16724991	4	238,267,198,159,	0,1469,2049,2575,
#Partially deleted in new
chr17	67784752	67785293	chr17:67784752-67785293	7	+	67784752	67784752	16724991	1	541,	0,
#Partially deleted in new
chr17	67825523	67945891	chr17:67825523-67945891	0	+	67825724	67945891	789624	22	814,823,224,204,189,191,356,132,130,139,180,2311,125,129,151,43,247,152,109,218,223,483,	0,28416,40940,49293,50032,66320,67846,68510,78265,79178,84058,85353,93190,94491,97316,99023,102831,103812,106387,114915,118626,119885,
#Partially deleted in new
chr17	67825663	67984378	chr17:67825663-67984378	1	+	67825724	67982288	0	30	674,823,224,204,189,189,191,356,132,130,139,180,2311,125,129,151,43,247,152,109,218,223,917,83,226,335,193,85,187,2127,	0,28276,40800,49153,49892,60464,66180,67706,68370,78125,79038,83918,85213,93050,94351,97176,98883,102691,103672,106247,114775,118486,119745,122062,122417,133877,138548,140908,150108,156588,
#Partially deleted in new
chr17	67825664	67983153	chr17:67825664-67983153	1	+	67825724	67982288	0	28	673,823,224,204,191,356,132,130,139,180,2311,125,129,151,43,247,152,109,218,223,917,83,226,335,193,85,187,902,	0,28275,40799,49152,66179,67705,68369,78124,79037,83917,85212,93049,94350,97175,98882,102690,103671,106246,114774,118485,119744,122061,122416,133876,138547,140907,150107,156587,
#Partially deleted in new
chr17	67826032	67984317	chr17:67826032-67984317	1	+	67826141	67982288	789624	31	305,823,224,204,189,189,191,356,132,130,139,180,2311,125,129,151,43,247,152,109,218,223,488,83,226,335,174,193,85,187,2066,	0,27907,40431,48784,49523,60095,65811,67337,68001,77756,78669,83549,84844,92681,93982,96807,98514,102322,103303,105878,114406,118117,119376,121693,122048,133508,137300,138179,140539,149739,156219,
#Partially deleted in new
chr17	67826032	67984317	chr17:67826032-67984317	3	+	67826141	67982288	789624	31	305,823,224,204,189,189,191,356,132,130,139,180,2311,125,129,151,43,247,152,109,218,223,917,83,226,335,174,193,85,187,2066,	0,27907,40431,48784,49523,60095,65811,67337,68001,77756,78669,83549,84844,92681,93982,96807,98514,102322,103303,105878,114406,118117,119376,121693,122048,133508,137300,138179,140539,149739,156219,
#Partially deleted in new
chr17	67826111	67903882	chr17:67826111-67903882	1	+	67826141	67894095	789624	11	226,823,224,204,189,189,191,309,46,132,94,	0,27828,40352,48705,49444,60016,65732,67258,67568,67922,77677,
#Partially deleted in new
chr17	67826141	67982288	chr17:67826141-67982288	0	+	67826141	67982288	789624	30	196,823,224,204,189,189,191,356,132,130,139,180,2311,125,129,151,43,247,152,109,218,223,488,83,226,335,193,85,187,37,	0,27798,40322,48675,49414,59986,65702,67228,67892,77647,78560,83440,84735,92572,93873,96698,98405,102213,103194,105769,114297,118008,119267,121584,121939,133399,138070,140430,149630,156110,
#Partially deleted in new
chr17	67874919	67891962	chr17:67874919-67891962	0	+	67874919	67891962	789624	3	101,189,119,	0,11208,16924,
#Partially deleted in new
chr17	67891451	67893556	chr17:67891451-67893556	0	+	67891451	67891451	8553170	2	583,187,	0,1918,
#Deleted in new
chr17	67893220	67894078	chr17:67893220-67894078	0	+	67893220	67893220	8553170	2	505,45,	0,813,
#Partially deleted in new
chr17	67920099	67940545	chr17:67920099-67940545	0	+	67920099	67940545	789624	8	44,151,43,247,162,152,109,107,	0,2740,4447,8255,8859,9236,11811,20339,
#Partially deleted in new
chr17	67936608	67944333	chr17:67936608-67944333	0	+	67936608	67936608	8553170	3	73,218,184,	0,3830,7541,
#Partially deleted in new
chr17	67940527	67944591	chr17:67940527-67944591	0	+	67940527	67940527	8553170	2	129,442,	0,3622,
#Partially deleted in new
chr17	67940562	67960377	chr17:67940562-67960377	0	+	67940562	67959879	789624	6	94,223,488,83,226,837,	0,3587,4846,7163,7518,18978,
#Partially deleted in new
chr17	67944269	67945571	chr17:67944269-67945571	0	+	67944269	67944269	8553170	2	215,163,	0,1139,
#Partially deleted in new
chr17	67947753	67981762	chr17:67947753-67981762	0	+	67947753	67981442	789624	8	55,226,335,174,193,85,187,327,	0,327,11787,15579,16458,18818,28018,33682,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	67950884	67951746	chr17:67950884-67951746	3	-	67950884	67950884	8553170	2	155,554,	0,308,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	67955313	67957291	chr17:67955313-67957291	3	+	67955313	67955313	8553170	1	1978,	0,
#Partially deleted in new
chr17	67964343	67982569	chr17:67964343-67982569	0	+	67964343	67982313	789624	3	61,85,318,	0,2228,17908,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	67965022	67982551	chr17:67965022-67982551	0	+	67965022	67965022	8553170	3	1634,187,300,	0,10749,17229,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	67973933	67976072	chr17:67973933-67976072	3	+	67973933	67973933	8553170	1	2139,	0,
#Partially deleted in new
chr17	67975801	67982569	chr17:67975801-67982569	0	+	67975801	67982169	789624	2	157,437,	0,6331,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	67977697	67977972	chr17:67977697-67977972	3	+	67977697	67977697	8553170	1	275,	0,
#Partially deleted in new
chr17	67991100	67996431	chr17:67991100-67996431	1	-	67991912	67996198	789624	4	1003,192,561,309,	0,1943,2323,5022,
#Partially deleted in new
chr17	67991101	67993552	chr17:67991101-67993552	0	-	67991101	67991101	8553170	2	1002,652,	0,1799,
#Partially deleted in new
chr17	67991129	67993649	chr17:67991129-67993649	1	-	67992918	67993146	789624	3	974,335,226,	0,1771,2294,
#Partially deleted in new
chr17	67991335	67993545	chr17:67991335-67993545	3	-	67991912	67993146	789624	3	768,192,122,	0,1708,2088,
#Partially deleted in new
chr17	68035518	68046842	chr17:68035518-68046842	3	+	68037132	68046596	0	11	322,98,138,89,269,95,264,234,183,150,339,	0,1591,1839,5159,6566,7386,7581,8319,8802,10253,10985,
#Partially deleted in new
chr17	68035707	68042209	chr17:68035707-68042209	0	+	68037132	68037407	789624	5	133,98,166,89,125,	0,1402,1622,4970,6377,
#Partially deleted in new
chr17	68035734	68042184	chr17:68035734-68042184	0	+	68037132	68042184	789624	5	106,128,138,89,100,	0,1345,1623,4943,6350,
#Partially deleted in new
chr17	68035959	68046842	chr17:68035959-68046842	1	+	68037132	68046596	0	11	597,98,138,89,269,95,264,234,183,150,339,	0,1150,1398,4718,6125,6945,7140,7878,8361,9812,10544,
#Partially deleted in new
chr17	68036993	68042212	chr17:68036993-68042212	0	+	68037132	68042212	789624	4	214,138,89,128,	0,364,3684,5091,
#Partially deleted in new
chr17	68042911	68043892	chr17:68042911-68043892	0	+	68042911	68042911	8553170	2	452,55,	0,926,
#Deleted in new
chr17	68045467	68046629	chr17:68045467-68046629	0	+	68045467	68045467	8553170	3	118,150,126,	0,304,1036,
#Partially deleted in new
chr17	68095067	68095757	chr17:68095067-68095757	7	+	68095067	68095067	16724991	2	282,189,	0,501,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	68096045	68101474	chr17:68096045-68101474	3	-	68096045	68096045	8553170	3	433,157,60,	0,4506,5369,
#Partially deleted in new
chr17	68096101	68101469	chr17:68096101-68101469	0	-	68096101	68096101	8553170	2	377,55,	0,5313,
#Partially deleted in new
chr17	68101907	68114527	chr17:68101907-68114527	7	+	68101907	68101907	16724991	2	54,106,	0,12514,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	68102942	68115518	chr17:68102942-68115518	5	+	68102942	68102942	16724991	3	116,104,458,	0,11479,12118,
#Partially deleted in new
chr17	68125776	68152468	chr17:68125776-68152468	7	-	68125776	68125776	16724991	15	105,853,351,309,169,51,107,72,81,138,73,60,861,66,429,	0,700,1618,2245,4377,8322,14843,15507,19015,19712,21674,23778,24287,25753,26263,
#Partially deleted in new
chr17	68126665	68129586	chr17:68126665-68129586	3	+	68126665	68126665	8553170	1	2921,	0,
#Partially deleted in new
chr17	68128339	68147523	chr17:68128339-68147523	4	-	68128339	68128339	16724991	3	90,119,72,	0,1864,19112,
#Partially deleted in new
chr17	68130249	68145595	chr17:68130249-68145595	4	-	68130249	68130249	16724991	5	73,75,72,81,70,	0,10370,11034,14542,15276,
#Partially deleted in new
chr17	68131461	68131907	chr17:68131461-68131907	3	+	68131461	68131461	8553170	1	446,	0,
#Deleted in new
chr17	68133200	68135935	chr17:68133200-68135935	3	+	68133200	68133200	8553170	1	2735,	0,
#Deleted in new
chr17	68134674	68135604	chr17:68134674-68135604	7	-	68134674	68134674	16724991	1	930,	0,
#Partially deleted in new
chr17	68152775	68159043	chr17:68152775-68159043	7	-	68152775	68152775	16724991	6	49,33,89,97,200,111,	0,60,1778,3812,5485,6157,
#Partially deleted in new
chr17	68188546	68189165	chr17:68188546-68189165	3	+	68188546	68188546	8553170	1	619,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	68189883	68192802	chr17:68189883-68192802	3	+	68189883	68189883	8553170	1	2919,	0,
#Deleted in new
chr17	68198920	68199596	chr17:68198920-68199596	7	+	68198920	68198920	16724991	1	676,	0,
#Partially deleted in new
chr17	68205488	68207493	chr17:68205488-68207493	3	+	68205488	68205488	8553170	1	2005,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	68246628	68247938	chr17:68246628-68247938	3	-	68246628	68246628	8553170	1	1310,	0,
#Partially deleted in new
chr17	68247573	68257156	chr17:68247573-68257156	3	+	68250187	68256969	789624	7	1132,283,174,129,164,177,343,	0,2614,3220,3476,6830,8126,9240,
#Partially deleted in new
chr17	68247929	68251178	chr17:68247929-68251178	0	+	68250187	68251178	789624	5	157,86,283,174,129,	0,1081,2258,2864,3120,
#Partially deleted in new
chr17	68248003	68257164	chr17:68248003-68257164	1	+	68250187	68256969	789624	8	154,66,283,174,129,164,177,351,	0,636,2184,2790,3046,6400,7696,8810,
#Partially deleted in new
chr17	68248034	68257139	chr17:68248034-68257139	1	+	68250187	68256969	789624	8	24,62,283,174,129,164,177,326,	0,609,2153,2759,3015,6369,7665,8779,
#Partially deleted in new
chr17	68248042	68257154	chr17:68248042-68257154	1	+	68250187	68256969	789624	8	44,66,283,174,129,164,177,341,	0,597,2145,2751,3007,6361,7657,8771,
#Partially deleted in new
chr17	68248050	68257127	chr17:68248050-68257127	1	+	68250187	68256969	789624	6	655,283,129,164,177,314,	0,2137,2999,6353,7649,8763,
#Partially deleted in new
chr17	68248057	68254566	chr17:68248057-68254566	0	+	68248064	68254566	789624	6	29,66,111,174,129,163,	0,582,2302,2736,2992,6346,
#Partially deleted in new
chr17	68248069	68257153	chr17:68248069-68257153	0	+	68248069	68248069	8553170	4	1027,780,129,340,	0,2118,2980,8744,
#Partially deleted in new
chr17	68248074	68254437	chr17:68248074-68254437	0	+	68250187	68254437	789624	6	36,66,283,174,129,34,	0,565,2113,2719,2975,6329,
#Partially deleted in new
chr17	68248076	68254562	chr17:68248076-68254562	0	+	68250187	68254562	789624	6	86,66,283,174,129,159,	0,563,2111,2717,2973,6327,
#Partially deleted in new
chr17	68248101	68254408	chr17:68248101-68254408	0	+	68250187	68254408	789624	6	56,66,283,174,129,5,	0,538,2086,2692,2948,6302,
#Partially deleted in new
chr17	68248503	68257090	chr17:68248503-68257090	1	+	68250187	68256969	789624	8	202,86,283,174,129,164,177,277,	0,507,1684,2290,2546,5900,7196,8310,
#Partially deleted in new
chr17	68248534	68256926	chr17:68248534-68256926	0	+	68248534	68248534	8553170	6	171,86,111,174,129,113,	0,476,1825,2259,2515,8279,
#Partially deleted in new
chr17	68249010	68251065	chr17:68249010-68251065	0	+	68249010	68249010	8553170	4	86,111,174,16,	0,1007,1783,2039,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	68249199	68257155	chr17:68249199-68257155	1	+	68250187	68256969	789624	6	1271,174,129,164,177,342,	0,1594,1850,5204,6500,7614,
#Partially deleted in new
chr17	68250186	68257121	chr17:68250186-68257121	1	+	68250187	68256833	789624	4	284,174,129,308,	0,607,863,6627,
#Partially deleted in new
chr17	68250282	68255817	chr17:68250282-68255817	0	+	68250282	68250824	789624	5	198,174,129,164,118,	0,511,767,4121,5417,
#Partially deleted in new
chr17	68250445	68257153	chr17:68250445-68257153	0	+	68250445	68251086	789624	5	35,129,164,177,340,	0,604,3958,5254,6368,
#Partially deleted in new
chr17	68251285	68257155	chr17:68251285-68257155	0	+	68251285	68251285	8553170	2	102,342,	0,5528,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	68259181	68422731	chr17:68259181-68422731	3	+	68307493	68420463	789624	12	245,769,188,48,112,138,197,81,109,121,91,2543,	0,47761,84422,87943,92393,97485,109366,111262,125882,135891,142178,161007,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	68259400	68274564	chr17:68259400-68274564	0	+	68259400	68259400	8553170	2	26,675,	0,14489,
#Partially deleted in new
chr17	68268196	68291266	chr17:68268196-68291266	1	-	68269095	68278320	789624	6	1150,816,129,144,239,181,	0,2642,4442,5730,9892,22889,
#Partially deleted in new
chr17	68268621	68278332	chr17:68268621-68278332	1	-	68269095	68278320	789624	7	725,73,45,695,129,144,244,	0,2217,2292,2338,4017,5305,9467,
#Partially deleted in new
chr17	68271627	68291267	chr17:68271627-68291267	0	-	68271627	68278320	789624	4	27,129,239,182,	0,1011,6461,19458,
#Partially deleted in new
chr17	68291490	68307579	chr17:68291490-68307579	0	+	68307493	68307579	789624	2	78,637,	0,15452,
#Partially deleted in new
chr17	68291494	68420859	chr17:68291494-68420859	1	+	68307493	68420463	789624	12	74,769,188,48,112,138,197,81,109,121,91,671,	0,15448,52109,55630,60080,65172,77053,78949,93569,103578,109865,128694,
#Partially deleted in new
chr17	68291517	68420785	chr17:68291517-68420785	1	+	68351612	68420463	789624	11	51,188,48,112,138,197,81,109,121,91,597,	0,52086,55607,60057,65149,77030,78926,93546,103555,109842,128671,
#Partially deleted in new
chr17	68346746	68420525	chr17:68346746-68420525	0	+	68346746	68346746	8553170	10	164,48,112,138,197,81,109,121,91,337,	0,378,4828,9920,21801,23697,38317,48326,54613,73442,
#Partially deleted in new
chr17	68347144	68359786	chr17:68347144-68359786	0	+	68347144	68347144	8553170	4	28,112,138,299,	0,4430,9522,12343,
#Partially deleted in new
chr17	68400155	68420665	chr17:68400155-68420665	0	+	68400155	68400155	8553170	3	411,91,477,	0,1204,20033,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	68401041	68420570	chr17:68401041-68420570	0	+	68401041	68401041	8553170	2	409,382,	0,19147,
#Partially deleted in new
chr17	68420947	68427232	chr17:68420947-68427232	0	-	68421772	68427232	789624	4	289,136,101,98,	0,737,5127,6187,
#Partially deleted in new
chr17	68421281	68457421	chr17:68421281-68457421	3	-	68421772	68457421	789624	13	539,101,119,108,165,108,71,93,98,97,170,83,80,	0,4793,5853,7547,8714,12186,13274,14338,15100,23211,29446,31628,36060,
#Partially deleted in new
chr17	68421308	68457499	chr17:68421308-68457499	0	-	68421308	68421308	8553170	12	512,101,119,108,165,112,71,93,98,97,170,158,	0,4766,5826,7520,8687,12155,13247,14311,15073,23184,29419,36033,
#Partially deleted in new
chr17	68421309	68457499	chr17:68421309-68457499	0	-	68427220	68457421	789624	13	511,101,119,108,165,112,71,93,98,97,170,83,158,	0,4765,5825,7519,8686,12154,13246,14310,15072,23183,29418,31600,36032,
#Partially deleted in new
chr17	68421485	68427175	chr17:68421485-68427175	0	-	68421816	68427175	789624	3	335,118,41,	0,4572,5649,
#Partially deleted in new
chr17	68421513	68457479	chr17:68421513-68457479	1	-	68421772	68450814	789624	12	307,101,119,108,165,108,71,93,98,97,170,138,	0,4561,5621,7315,8482,11954,13042,14106,14868,22979,29214,35828,
#Partially deleted in new
chr17	68424450	68424548	chr17:68424450-68424548	3	-	68424450	68424450	5263520	1	98,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	68425925	68427569	chr17:68425925-68427569	0	-	68425925	68425925	8553170	2	250,435,	0,1209,
#Partially deleted in new
chr17	68425929	68433571	chr17:68425929-68433571	0	-	68426053	68433571	789624	5	246,119,108,165,104,	0,1205,2899,4066,7538,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	68428244	68430132	chr17:68428244-68430132	0	-	68428244	68428244	8553170	2	692,137,	0,1751,
#Partially deleted in new
chr17	68428876	68448440	chr17:68428876-68448440	0	-	68428876	68428876	8553170	8	60,165,108,71,93,98,97,136,	0,1119,4591,5679,6743,7505,15616,19428,
#Partially deleted in new
chr17	68433508	68457513	chr17:68433508-68457513	0	-	68433508	68433508	8553170	7	67,93,98,97,170,83,172,	0,2111,2873,10984,17219,19401,23833,
#Partially deleted in new
chr17	68511779	68525818	chr17:68511779-68525818	0	+	68515399	68525818	789624	8	363,133,183,171,92,62,47,65,	0,3207,3614,10976,11945,12236,13132,13974,
#Partially deleted in new
chr17	68512031	68532762	chr17:68512031-68532762	1	+	68515399	68530449	0	11	111,183,171,92,62,47,159,61,122,82,2486,	0,3362,10724,11693,11984,12880,13722,15808,16838,17888,18245,
#Partially deleted in new
chr17	68512378	68533423	chr17:68512378-68533423	3	+	68515399	68530449	0	11	201,183,171,92,62,47,159,61,122,82,3147,	0,3015,10377,11346,11637,12533,13375,15461,16491,17541,17898,
#Deleted in new
chr17	68512414	68515815	chr17:68512414-68515815	0	+	68512414	68512414	8553170	2	134,422,	0,2979,
#Partially deleted in new
chr17	68512415	68524046	chr17:68512415-68524046	0	+	68515399	68524046	789624	5	80,183,171,92,31,	0,2978,10340,11309,11600,
#Partially deleted in new
chr17	68512425	68525912	chr17:68512425-68525912	0	+	68515399	68523761	789624	7	123,183,171,103,62,47,159,	0,2968,10330,11288,11590,12486,13328,
#Partially deleted in new
chr17	68512426	68533431	chr17:68512426-68533431	1	+	68515399	68530449	0	11	122,183,171,92,62,47,159,61,122,82,3155,	0,2967,10329,11298,11589,12485,13327,15413,16443,17493,17850,
#Partially deleted in new
chr17	68512429	68524130	chr17:68512429-68524130	0	+	68512429	68512429	8553170	5	119,183,171,92,115,	0,2964,10326,11295,11586,
#Partially deleted in new
chr17	68512449	68532759	chr17:68512449-68532759	0	+	68515399	68523761	789624	11	99,173,171,92,62,47,159,61,122,82,2483,	0,2944,10306,11275,11566,12462,13304,15390,16420,17470,17827,
#Partially deleted in new
chr17	68512449	68532762	chr17:68512449-68532762	1	+	68515399	68530449	0	12	99,133,183,171,92,62,47,159,61,122,82,2486,	0,2537,2944,10306,11275,11566,12462,13304,15390,16420,17470,17827,
#Partially deleted in new
chr17	68512466	68524078	chr17:68512466-68524078	0	+	68515399	68524078	789624	5	113,183,171,92,63,	0,2927,10289,11258,11549,
#Deleted in new
chr17	68512486	68515536	chr17:68512486-68515536	0	+	68515399	68515536	789624	4	62,69,133,143,	0,423,2500,2907,
#Partially deleted in new
chr17	68512881	68528992	chr17:68512881-68528992	0	+	68515399	68528992	789624	9	97,183,171,92,62,47,159,61,123,	0,2512,9874,10843,11134,12030,12872,14958,15988,
#Partially deleted in new
chr17	68512899	68522917	chr17:68512899-68522917	0	+	68515399	68522917	789624	4	71,133,183,162,	0,2087,2494,9856,
#Partially deleted in new
chr17	68512920	68522774	chr17:68512920-68522774	0	+	68515399	68522774	789624	3	351,183,19,	0,2473,9835,
#Partially deleted in new
chr17	68514820	68530664	chr17:68514820-68530664	1	+	68515399	68530449	0	10	756,171,92,62,47,159,61,122,82,388,	0,7935,8904,9195,10091,10933,13019,14049,15099,15456,
#Partially deleted in new
chr17	68515122	68524956	chr17:68515122-68524956	0	+	68515399	68524956	789624	6	30,183,171,92,62,45,	0,271,7633,8602,8893,9789,
#Partially deleted in new
chr17	68515399	68551319	chr17:68515399-68551319	1	+	68515399	68551124	0	10	177,171,92,62,47,159,61,122,82,236,	0,7356,8325,8616,9512,10354,12440,13470,14520,35684,
#Deleted in new
chr17	68525794	68530654	chr17:68525794-68530654	0	+	68525794	68530078	789624	4	118,61,122,735,	0,2045,3075,4125,
#Deleted in new
chr17	68525881	68530461	chr17:68525881-68530461	0	+	68525881	68528644	789624	6	31,61,89,122,82,185,	0,1958,2749,2988,4038,4395,
#Deleted in new
chr17	68527583	68530319	chr17:68527583-68530319	0	+	68527583	68527583	8553170	4	317,122,82,43,	0,1286,2336,2693,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	68535112	68558390	chr17:68535112-68558390	0	-	68535112	68535112	789624	11	2629,60,82,135,181,116,89,79,51,185,61,	0,4224,4772,5736,6872,7581,8516,16760,19664,20446,23217,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	68535116	68540577	chr17:68535116-68540577	1	-	68537476	68540577	789624	4	2625,60,82,31,	0,4220,4768,5430,
#Partially deleted in new
chr17	68536870	68601389	chr17:68536870-68601389	3	-	68537476	68600666	0	11	871,60,82,110,181,116,93,79,51,185,1127,	0,2466,3014,3978,5114,5823,6758,15002,17906,18688,63392,
#Partially deleted in new
chr17	68537120	68543669	chr17:68537120-68543669	0	-	68539941	68543669	789624	4	621,60,82,41,	0,2216,2764,6508,
#Partially deleted in new
chr17	68537122	68541991	chr17:68537122-68541991	0	-	68537122	68537122	8553170	5	619,60,82,177,1143,	0,2214,2762,3424,3726,
#Partially deleted in new
chr17	68537616	68600596	chr17:68537616-68600596	0	-	68590300	68600596	789624	12	125,60,82,110,181,116,93,79,51,185,226,334,	0,1720,2268,3232,4368,5077,6012,14256,17160,17942,52507,62646,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	68540910	68558375	chr17:68540910-68558375	0	-	68540910	68540910	8553170	8	73,181,116,93,79,51,185,46,	0,1074,1783,2718,10962,13866,14648,17419,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	68557515	68582577	chr17:68557515-68582577	3	+	68557515	68557515	8553170	3	76,116,192,	0,17553,24870,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	68591795	68763882	chr17:68591795-68763882	0	+	68591795	68591795	8553170	3	83,115,393,	0,6236,171694,
#Partially deleted in new
chr17	68628102	68677166	chr17:68628102-68677166	0	+	68628102	68628102	8553170	3	84,88,218,	0,30545,48846,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	68628153	68679606	chr17:68628153-68679606	1	+	68628153	68628153	789624	5	33,96,54,417,2016,	0,14516,43959,48795,49437,
#Partially deleted in new
chr17	68691808	68716064	chr17:68691808-68716064	7	-	68691808	68691808	16724991	5	228,169,127,194,68,	0,2161,5066,16285,24188,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	68793548	68797822	chr17:68793548-68797822	3	-	68793548	68793548	8553170	2	156,362,	0,3912,
#Partially deleted in new
chr17	68867291	68955351	chr17:68867291-68955351	1	-	68868084	68942034	789624	38	892,56,80,141,120,95,76,161,92,118,121,92,66,120,114,171,108,138,134,167,199,120,140,91,139,176,111,59,169,148,186,142,227,104,165,205,101,133,	0,1009,2408,7968,8322,9168,9336,10227,13828,14571,15307,16499,17039,17904,19725,20044,24197,26881,27588,35421,36009,38752,40448,50069,50755,52009,54090,54950,57409,60624,61757,62269,64996,65876,69659,73466,74647,87927,
#Partially deleted in new
chr17	68867291	68955392	chr17:68867291-68955392	1	-	68868084	68942034	789624	39	892,56,80,141,120,95,76,161,92,118,106,92,66,120,114,171,108,138,134,167,199,120,140,91,139,120,176,111,59,169,148,186,142,227,104,165,205,101,174,	0,1009,2408,7968,8322,9168,9336,10227,13828,14571,15307,16499,17039,17904,19725,20044,24197,26881,27588,35421,36009,38752,40448,50069,50755,51135,52009,54090,54950,57409,60624,61757,62269,64996,65876,69659,73466,74647,87927,
#Partially deleted in new
chr17	68876313	68877646	chr17:68876313-68877646	0	-	68876313	68876313	8553170	3	241,76,128,	0,314,1205,
#Partially deleted in new
chr17	68876679	68884597	chr17:68876679-68884597	0	-	68876679	68876679	8553170	7	24,161,92,118,121,92,267,	0,839,4440,5183,5919,7111,7651,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	68877196	68880267	chr17:68877196-68880267	0	-	68877196	68877196	8553170	1	3071,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	68880778	68882605	chr17:68880778-68882605	0	-	68880778	68880778	8553170	3	433,118,7,	0,1084,1820,
#Partially deleted in new
chr17	68886799	68955325	chr17:68886799-68955325	0	-	68886799	68886799	8553170	24	331,171,108,138,134,167,199,120,140,91,139,120,176,111,59,169,148,186,142,227,104,165,205,107,	0,536,4689,7373,8080,15913,16501,19244,20940,30561,31247,31627,32501,34582,35442,37901,41116,42249,42761,45488,46368,50151,53958,68419,
#Partially deleted in new
chr17	68894044	68929115	chr17:68894044-68929115	0	-	68894044	68929115	789624	15	266,134,167,199,120,140,91,139,120,176,111,59,169,148,67,	0,835,8668,9256,11999,13695,23316,24002,24382,25256,27337,28197,30656,33871,35004,
#Partially deleted in new
chr17	68894046	68955383	chr17:68894046-68955383	1	-	68921414	68929066	789624	24	264,134,167,199,120,140,91,139,120,176,69,41,59,169,148,62,57,142,227,104,165,205,101,165,	0,833,8666,9254,11997,13693,23314,24000,24380,25254,27335,27405,28195,30654,33869,35002,35131,35514,38241,39121,42904,46711,47892,61172,
#Partially deleted in new
chr17	68894783	68903427	chr17:68894783-68903427	0	-	68894783	68894783	8553170	3	230,167,127,	0,7929,8517,
#Partially deleted in new
chr17	68918077	68919997	chr17:68918077-68919997	0	-	68918077	68918077	8553170	3	108,120,697,	0,349,1223,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	68931761	68955351	chr17:68931761-68955351	0	-	68931761	68931761	8553170	7	753,104,165,205,101,161,133,	0,1406,5189,8996,10177,17550,23457,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	68931761	68955392	chr17:68931761-68955392	0	-	68931761	68931761	8553170	6	753,104,165,205,101,174,	0,1406,5189,8996,10177,23457,
#Partially deleted in new
chr17	68937070	68944874	chr17:68937070-68944874	0	-	68937070	68942034	789624	4	45,205,101,158,	0,3687,4868,7646,
#Partially deleted in new
chr17	68944530	69012050	chr17:68944530-69012050	0	+	68944530	68944530	8553170	2	377,68,	0,67452,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr17	68974487	69061064	chr17:68974487-69061064	3	-	68975914	69051126	789624	39	1526,56,80,141,120,95,76,161,92,118,121,92,69,120,114,174,108,138,134,167,199,120,140,91,139,120,176,111,59,169,148,186,142,227,104,165,208,109,199,	0,1647,8074,9221,9568,10397,10565,11676,14539,15325,16349,17687,18528,21407,33271,33574,37488,41765,43168,43925,45900,47254,49726,51889,52488,52842,53152,54047,54681,57620,59238,60758,61172,69001,70009,70684,74795,76543,86378,
#Boundary problem: need 38, got 0, diff 38, mapped 0.0
chr17	68974631	69060924	chr17:68974631-69060924	1	-	68975914	69051126	789624	38	1382,56,80,141,120,95,76,161,92,118,121,92,69,120,174,108,138,134,167,199,120,140,91,139,120,176,111,59,169,148,186,142,227,104,165,208,109,59,	0,1503,7930,9077,9424,10253,10421,11532,14395,15181,16205,17543,18384,21263,33430,37344,41621,43024,43781,45756,47110,49582,51745,52344,52698,53008,53903,54537,57476,59094,60614,61028,68857,69865,70540,74651,76399,86234,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	68986607	68989141	chr17:68986607-68989141	0	-	68986607	68986607	8553170	2	120,115,	0,2419,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	68989924	68992682	chr17:68989924-68992682	0	-	68989924	68989924	8553170	3	6,121,508,	0,912,2250,
#Partially deleted in new
chr17	69011824	69017772	chr17:69011824-69017772	0	-	69011824	69011824	8553170	3	259,138,117,	0,4428,5831,
#Partially deleted in new
chr17	69012345	69022196	chr17:69012345-69022196	1	+	69012345	69012345	8553170	2	8,418,	0,9433,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	69012345	69020806	chr17:69012345-69020806	0	+	69012345	69012345	8553170	4	8,48,113,381,	0,5758,7536,8080,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	69032600	69049357	chr17:69032600-69049357	0	-	69032600	69032600	8553170	7	1273,186,142,227,104,165,75,	0,2645,3059,10888,11896,12571,16682,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	69042914	69060906	chr17:69042914-69060906	1	-	69043484	69051126	789624	6	801,104,165,208,109,41,	0,1582,2257,6368,8116,17951,
#Partially deleted in new
chr17	69049317	69060949	chr17:69049317-69060949	0	-	69049317	69051126	789624	4	173,109,216,84,	0,1713,2222,11548,
#Partially deleted in new
chr17	69078701	69141874	chr17:69078701-69141874	3	-	69078972	69140703	789624	39	373,56,80,141,120,95,76,155,92,118,121,92,78,120,114,174,108,138,134,167,184,117,140,91,139,120,176,111,59,169,148,186,142,227,104,159,205,141,130,	0,508,2364,4171,4510,5559,5730,6326,6923,7916,8651,9465,10763,12441,17538,17926,19218,22095,24133,26760,27326,28994,32099,33481,34520,34916,36060,36674,39196,44537,46186,49917,50908,54939,55937,57390,58594,61906,63043,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr17	69078916	69098592	chr17:69078916-69098592	0	-	69078916	69078916	8553170	18	158,56,80,141,120,95,76,155,92,118,121,92,78,120,114,174,108,278,	0,293,2149,3956,4295,5344,5515,6111,6708,7701,8436,9250,10548,12226,17323,17711,19003,19398,
#Deleted in new
chr17	69085653	69087618	chr17:69085653-69087618	0	-	69085653	69085653	8553170	3	63,118,266,	0,964,1699,
#Deleted in new
chr17	69094288	69095499	chr17:69094288-69095499	7	-	69094288	69094288	16724991	1	1211,	0,
#Deleted in new
chr17	69099541	69099656	chr17:69099541-69099656	3	+	69099541	69099541	5263520	1	115,	0,
#Deleted in new
chr17	69099563	69099632	chr17:69099563-69099632	3	-	69099563	69099563	5263520	1	69,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	69103911	69115442	chr17:69103911-69115442	0	-	69103911	69103911	8553170	5	1717,184,6042,176,67,	0,2116,3784,10850,11464,
#Partially deleted in new
chr17	69105490	69117988	chr17:69105490-69117988	0	-	69105490	69105490	8553170	9	721,117,140,91,139,120,176,111,91,	0,2205,5310,6692,7731,8127,9271,9885,12407,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	69114779	69115914	chr17:69114779-69115914	0	-	69114779	69114779	8553170	3	158,111,136,	0,596,999,
#Partially deleted in new
chr17	69135229	69141888	chr17:69135229-69141888	1	-	69135993	69140703	789624	4	1021,205,141,144,	0,2066,5378,6515,
#Partially deleted in new
chr17	69147213	69150062	chr17:69147213-69150062	0	-	69147437	69150062	789624	3	227,56,79,	0,1819,2770,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	69147218	69150063	chr17:69147218-69150063	0	-	69147520	69150063	789624	3	395,56,80,	0,1814,2765,
#Partially deleted in new
chr17	69148006	69244846	chr17:69148006-69244846	3	-	69148826	69225358	789624	40	919,56,80,141,120,95,76,179,92,118,121,92,81,120,114,171,108,138,134,167,199,120,140,91,139,120,176,111,59,169,148,186,142,227,104,165,205,141,280,318,	0,1026,1977,4036,4355,5298,5464,5824,6228,7012,7798,8825,16067,16957,26274,26600,27399,34146,34668,37470,39674,42351,43169,44556,45103,45486,45807,46378,49057,53493,66697,67808,68210,71538,73785,74526,77318,79138,80574,96522,
#Boundary problem: need 41, got 0, diff 41, mapped 0.0
chr17	69148007	69228655	chr17:69148007-69228655	0	-	69196358	69225358	789624	41	918,56,80,141,120,95,76,179,92,118,121,92,81,120,114,171,108,89,138,134,167,199,120,140,91,139,120,176,111,198,59,169,148,186,142,227,104,165,205,141,75,	0,1025,1976,4035,4354,5297,5463,5823,6227,7011,7797,8824,16066,16956,26273,26599,27398,30912,34145,34667,37469,39673,42350,43168,44555,45102,45485,45806,46377,48278,49056,53492,66696,67807,68209,71537,73784,74525,77317,79137,80573,
#Deleted in new
chr17	69148179	69150452	chr17:69148179-69150452	0	-	69148179	69148179	8553170	3	746,56,465,	0,853,1808,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr17	69148498	69175781	chr17:69148498-69175781	0	-	69148498	69148498	8553170	17	427,56,80,141,120,95,76,179,92,118,121,92,81,120,114,108,163,	0,534,1485,3544,3863,4806,4972,5332,5736,6520,7306,8333,15575,16465,25782,26907,27120,
#Boundary problem: need 35, got 0, diff 35, mapped 0.0
chr17	69148591	69225442	chr17:69148591-69225442	0	-	69197105	69225358	789624	35	334,56,80,141,120,705,92,118,121,92,81,120,114,171,108,138,134,167,199,120,140,91,139,120,176,111,238,59,148,186,142,227,104,165,118,	0,441,1392,3451,3770,4713,5643,6427,7213,8240,15482,16372,25689,26015,26814,33561,34083,36885,39089,41766,42584,43971,44518,44901,45222,45793,47654,48472,66112,67223,67625,70953,73200,73941,76733,
#Partially deleted in new
chr17	69148591	69225442	chr17:69148591-69225442	0	-	69153383	69225358	789624	36	334,56,80,141,120,95,179,92,118,121,92,81,120,114,171,108,138,134,167,199,120,140,91,139,120,176,111,59,169,148,186,142,227,104,165,118,	0,441,1392,3451,3770,4713,5239,5643,6427,7213,8240,15482,16372,25689,26015,26814,33561,34083,36885,39089,41766,42584,43971,44518,44901,45222,45793,48472,52908,66112,67223,67625,70953,73200,73941,76733,
#Deleted in new
chr17	69148744	69149323	chr17:69148744-69149323	0	-	69148744	69148744	8553170	2	181,291,	0,288,
#Partially deleted in new
chr17	69214703	69228677	chr17:69214703-69228677	0	-	69219691	69225358	789624	8	148,186,142,227,165,205,141,97,	0,1111,1513,4841,7829,10621,12441,13877,
#Partially deleted in new
chr17	69214771	69222613	chr17:69214771-69222613	0	-	69215540	69222613	789624	5	80,92,227,104,81,	0,678,4773,7020,7761,
#Deleted in new
chr17	69222677	69228700	chr17:69222677-69228700	0	-	69222677	69222677	8553170	5	20,82,205,141,120,	0,950,2647,4467,5903,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	69232962	69235012	chr17:69232962-69235012	3	-	69232962	69232962	789624	1	2050,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	69242229	69244097	chr17:69242229-69244097	3	+	69242229	69242229	8553170	2	288,223,	0,1645,
#Partially deleted in new
chr17	69244310	69327101	chr17:69244310-69327101	3	-	69247536	69314415	789624	39	3334,56,80,150,120,95,76,176,92,118,127,92,75,135,114,171,114,138,128,170,202,120,140,91,139,120,176,111,59,169,148,189,142,230,89,162,205,117,50,	0,3951,5594,6161,7436,9262,9483,10004,11232,11422,11846,15395,16027,16814,17324,20424,23632,26302,26851,29648,33330,39642,41587,41910,43302,44866,45551,46905,50344,52880,56828,58407,60358,62414,63969,64951,68781,70003,82741,
#Partially deleted in new
chr17	69246950	69315425	chr17:69246950-69315425	1	-	69247536	69314415	789624	38	694,56,80,150,120,95,76,176,92,118,127,92,75,135,114,171,114,138,128,170,202,120,140,91,139,120,176,111,59,169,148,189,142,230,89,162,205,1112,	0,1311,2954,3521,4796,6622,6843,7364,8592,8782,9206,12755,13387,14174,14684,17784,20992,23662,24211,27008,30690,37002,38947,39270,40662,42226,42911,44265,47704,50240,54188,55767,57718,59774,61329,62311,66141,67363,
#Partially deleted in new
chr17	69247144	69286261	chr17:69247144-69286261	0	-	69285409	69286261	789624	25	500,56,80,150,120,95,76,176,92,118,127,92,75,135,114,171,114,138,128,170,202,120,33,140,41,	0,1117,2760,3327,4602,6428,6649,7170,8398,8588,9012,12561,13193,13980,14490,17590,20798,23468,24017,26814,30496,36808,38243,38753,39076,
#Partially deleted in new
chr17	69247345	69302849	chr17:69247345-69302849	0	-	69285409	69302849	789624	32	299,56,80,150,95,76,176,92,118,127,92,75,135,114,171,114,138,128,186,202,120,33,140,91,139,120,176,111,59,169,148,132,	0,916,2559,3126,6227,6448,6969,8197,8387,8811,12360,12992,13779,14289,17389,20597,23267,23816,26597,30295,36607,38042,38552,38875,40267,41831,42516,43870,47309,49845,53793,55372,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	69247375	69249141	chr17:69247375-69249141	0	-	69247375	69247375	8553170	2	269,880,	0,886,
#Partially deleted in new
chr17	69248259	69268874	chr17:69248259-69268874	0	-	69248259	69267984	789624	17	58,80,150,120,95,76,176,92,118,127,92,75,135,114,171,114,155,	0,1645,2212,3487,5313,5534,6055,7283,7473,7897,11446,12078,12865,13375,16475,19683,20460,
#Deleted in new
chr17	69249287	69251628	chr17:69249287-69251628	0	-	69249287	69249287	8553170	2	697,1157,	0,1184,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr17	69273970	69327182	chr17:69273970-69327182	0	-	69273970	69314415	789624	21	158,202,120,140,91,139,120,176,111,59,169,148,189,142,230,89,162,205,117,119,131,	0,3670,9982,11927,12250,13642,15206,15891,17245,20684,23220,27168,28747,30698,32754,34309,35291,39121,40343,51728,53081,
#Partially deleted in new
chr17	69304093	69309320	chr17:69304093-69309320	0	-	69304611	69309320	789624	4	717,230,89,59,	0,2631,4186,5168,
#Partially deleted in new
chr17	69306762	69327090	chr17:69306762-69327090	0	-	69306762	69314415	789624	6	192,89,162,205,117,39,	0,1517,2499,6329,7551,20289,
#Partially deleted in new
chr17	69306762	69315360	chr17:69306762-69315360	0	-	69306762	69314415	789624	5	192,89,162,205,1047,	0,1517,2499,6329,7551,
#Partially deleted in new
chr17	69309348	69327097	chr17:69309348-69327097	0	-	69309348	69314415	789624	4	75,205,290,46,	0,3743,4965,17703,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	69313284	69327244	chr17:69313284-69327244	0	-	69313284	69314415	789624	5	12,117,119,119,193,	0,1029,4420,12414,13767,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	69316899	69327111	chr17:69316899-69327111	0	-	69316899	69316899	8553170	4	333,119,119,60,	0,805,8799,10152,
#Deleted in new
chr17	69318732	69318961	chr17:69318732-69318961	7	+	69318732	69318732	16724991	1	229,	0,
#Partially deleted in new
chr17	69355132	69355218	chr17:69355132-69355218	3	-	69355132	69355132	8553170	1	86,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	69414697	69553861	chr17:69414697-69553861	3	+	69414984	69541753	0	12	303,67,49,114,120,117,52,128,78,140,46,12186,	0,91082,102157,102802,104615,105572,106351,108816,110203,111872,121417,126978,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	69414710	69521833	chr17:69414710-69521833	0	+	69414710	69414710	8553170	7	290,67,49,114,120,117,785,	0,91069,102144,102789,104602,105559,106338,
#Partially deleted in new
chr17	69414833	69542510	chr17:69414833-69542510	0	+	69414984	69519335	789624	12	167,67,49,52,120,117,52,128,78,140,46,835,	0,90946,102021,102666,104479,105436,106215,108680,110067,111736,121281,126842,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	69433083	69435533	chr17:69433083-69435533	3	+	69433083	69433083	8553170	1	2450,	0,
#Partially deleted in new
chr17	69477138	69501755	chr17:69477138-69501755	3	-	69477138	69477138	8553170	3	412,115,57,	0,8096,24560,
#Partially deleted in new
chr17	69502153	69520324	chr17:69502153-69520324	0	+	69517535	69520324	789624	6	264,67,49,114,120,55,	0,3626,14701,15346,17159,18116,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	69502265	69520278	chr17:69502265-69520278	0	+	69504554	69520278	789624	7	152,121,67,49,114,120,9,	0,2193,3514,14589,15234,17047,18004,
#Partially deleted in new
chr17	69502428	69542019	chr17:69502428-69542019	1	+	69517535	69541753	0	12	257,67,49,114,120,117,52,128,78,140,46,344,	0,3351,14426,15071,16884,17841,18620,21085,22472,24141,33686,39247,
#Partially deleted in new
chr17	69502428	69542017	chr17:69502428-69542017	1	+	69517535	69541753	0	12	256,67,49,114,120,117,52,128,78,140,46,342,	0,3351,14426,15071,16884,17841,18620,21085,22472,24141,33686,39247,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	69505447	69521826	chr17:69505447-69521826	0	+	69505447	69505447	8553170	4	399,49,114,2514,	0,11407,12052,13865,
#Partially deleted in new
chr17	69536065	69542011	chr17:69536065-69542011	0	+	69536065	69536065	8553170	2	95,336,	0,5610,
#Partially deleted in new
chr17	69577250	69624734	chr17:69577250-69624734	0	+	69577250	69577250	8553170	3	75,154,65,	0,17536,47419,
#Partially deleted in new
chr17	69593986	69902908	chr17:69593986-69902908	3	+	69593986	69593986	789624	6	79,154,83,47,90,167,	0,800,30683,251453,284979,308755,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	69594784	69628351	chr17:69594784-69628351	1	+	69594784	69594784	8553170	3	156,83,2846,	0,29885,30721,
#Partially deleted in new
chr17	69594865	69846545	chr17:69594865-69846545	0	+	69594865	69594865	8553170	4	75,83,47,232,	0,29804,250574,251448,
#Deleted in new
chr17	69707192	69707373	chr17:69707192-69707373	7	-	69707192	69707192	16724991	1	181,	0,
#Partially deleted in new
chr17	69763676	69903000	chr17:69763676-69903000	0	+	69763676	69763676	8553170	2	306,259,	0,139065,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	69961673	69994845	chr17:69961673-69994845	3	+	69961673	69961673	8553170	8	164,171,130,100,126,289,172,167,	0,2708,19570,20472,21711,27287,31279,33005,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	69961706	69983473	chr17:69961706-69983473	0	+	69961706	69961706	789624	5	131,171,103,134,89,	0,2675,19564,20622,21678,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	69961761	69983538	chr17:69961761-69983538	0	+	69961761	69961761	789624	5	76,171,130,134,154,	0,2620,19482,20567,21623,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	69985985	69986094	chr17:69985985-69986094	3	+	69985985	69985985	8553170	1	109,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	70017323	70128859	chr17:70017323-70128859	3	-	70017323	70017323	8553170	5	69,105,119,89,217,	0,2164,4755,110745,111319,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	70018110	70073282	chr17:70018110-70073282	1	-	70018110	70018110	8553170	7	97,61,130,119,182,79,57,	0,420,1352,3968,35188,35530,55115,
#Partially deleted in new
chr17	70051276	70068095	chr17:70051276-70068095	3	+	70051276	70051276	789624	2	134,911,	0,15908,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	70051377	70067491	chr17:70051377-70067491	1	+	70051377	70051377	8553170	3	33,118,307,	0,10833,15807,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	70075224	70135603	chr17:70075224-70135603	1	+	70132087	70133344	789624	5	166,109,81,97,3609,	0,25433,33076,55654,56770,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	70075224	70135603	chr17:70075224-70135603	1	+	70132087	70133344	789624	4	166,109,97,3609,	0,25433,55654,56770,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	70075224	70135603	chr17:70075224-70135603	3	+	70132087	70133344	789624	6	166,109,81,97,128,3609,	0,25433,33076,55654,56128,56770,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	70075245	70102210	chr17:70075245-70102210	0	+	70075245	70075245	8553170	2	145,1553,	0,25412,
#Partially deleted in new
chr17	70075320	70135608	chr17:70075320-70135608	1	+	70132087	70133344	789624	2	70,3614,	0,56674,
#Partially deleted in new
chr17	70096639	70133604	chr17:70096639-70133604	1	+	70096902	70133344	789624	2	287,1610,	0,35355,
#Partially deleted in new
chr17	70104853	70135603	chr17:70104853-70135603	1	+	70132087	70133344	789624	4	222,81,97,3609,	0,3447,26025,27141,
#Partially deleted in new
chr17	70104853	70135608	chr17:70104853-70135608	1	+	70130963	70133344	789624	4	222,81,97,3614,	0,3447,26025,27141,
#Partially deleted in new
chr17	70104997	70132280	chr17:70104997-70132280	0	+	70132087	70132280	789624	4	78,97,128,286,	0,25881,26355,26997,
#Partially deleted in new
chr17	70104999	70132194	chr17:70104999-70132194	0	+	70132087	70132194	789624	5	76,81,97,128,200,	0,3301,25879,26353,26995,
#Deleted in new
chr17	70166960	70169402	chr17:70166960-70169402	3	-	70166960	70166960	789624	1	2442,	0,
#Deleted in new
chr17	70168672	70176323	chr17:70168672-70176323	1	+	70175039	70176323	789624	2	185,1500,	0,6151,
#Deleted in new
chr17	70169534	70180048	chr17:70169534-70180048	3	+	70175039	70176323	789624	2	167,5225,	0,5289,
#Deleted in new
chr17	70241323	70241761	chr17:70241323-70241761	7	+	70241323	70241323	16724991	1	438,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	70312830	70368916	chr17:70312830-70368916	3	-	70312830	70312830	8553170	3	558,75,101,	0,20685,55985,
#Deleted in new
chr17	70628916	70629265	chr17:70628916-70629265	7	-	70628916	70628916	16724991	1	349,	0,
#Deleted in new
chr17	70778603	70779230	chr17:70778603-70779230	3	-	70778603	70778603	8553170	1	627,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	71011996	71013587	chr17:71011996-71013587	7	+	71011996	71011996	16724991	2	229,1027,	0,564,
#Partially deleted in new
chr17	71097774	71202177	chr17:71097774-71202177	3	-	71097774	71097774	789624	4	1844,81,60,74,	0,34615,87821,104329,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	71298155	71298218	chr17:71298155-71298218	3	-	71298155	71298155	8553170	1	63,	0,
#Deleted in new
chr17	71596337	71597278	chr17:71596337-71597278	3	+	71596337	71596337	8553170	2	229,332,	0,609,
#Deleted in new
chr17	71596475	71597279	chr17:71596475-71597279	0	+	71596475	71596475	8553170	2	99,333,	0,471,
#Deleted in new
chr17	71620977	71621436	chr17:71620977-71621436	7	+	71620977	71620977	16724991	1	459,	0,
#Partially deleted in new
chr17	71829869	71871750	chr17:71829869-71871750	3	-	71829869	71829869	8553170	5	371,68,88,112,64,	0,28751,36076,40683,41817,
#Partially deleted in new
chr17	72021850	72030583	chr17:72021850-72030583	1	-	72021850	72021850	789624	4	129,152,80,263,	0,2302,4047,8470,
#Partially deleted in new
chr17	72021850	72034092	chr17:72021850-72034092	3	-	72021850	72021850	8553170	2	129,194,	0,12048,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	72030653	72041297	chr17:72030653-72041297	3	+	72030653	72030653	789624	3	198,87,3293,	0,6391,7351,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	72030653	72038748	chr17:72030653-72038748	0	+	72030653	72030653	8553170	3	198,87,234,	0,6391,7861,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	72037313	72057719	chr17:72037313-72057719	1	-	72037313	72037313	8553170	5	50,67,160,97,261,	0,3202,3376,8114,20145,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	72040646	72057734	chr17:72040646-72057734	1	-	72040646	72040646	8553170	3	203,97,276,	0,4781,16812,
#Partially deleted in new
chr17	72040713	72111703	chr17:72040713-72111703	1	-	72040713	72040713	8553170	6	136,121,294,123,56,91,	0,41207,41408,43192,44276,70899,
#Partially deleted in new
chr17	72040731	72173583	chr17:72040731-72173583	3	-	72040731	72040731	8553170	7	118,169,121,123,56,99,47,	0,30331,41189,43174,44258,131981,132805,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	72040808	72046347	chr17:72040808-72046347	1	-	72040808	72040808	8553170	2	41,920,	0,4619,
#Partially deleted in new
chr17	72071041	72119493	chr17:72071041-72119493	1	-	72071041	72071041	8553170	3	190,70,80,	0,47230,48372,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	72071042	72116016	chr17:72071042-72116016	1	-	72071042	72071042	789624	7	189,2185,121,123,56,195,163,	0,3506,10878,12863,13947,43163,44811,
#Partially deleted in new
chr17	72071042	72119448	chr17:72071042-72119448	0	-	72071042	72071042	8553170	4	189,121,123,35,	0,10878,12863,48371,
#Partially deleted in new
chr17	72072332	72093481	chr17:72072332-72093481	3	+	72072332	72072332	789624	6	510,97,185,130,589,552,	0,4880,9617,11499,16754,20597,
#Partially deleted in new
chr17	72076485	72085501	chr17:72076485-72085501	0	-	72076485	72076485	8553170	4	245,121,123,512,	0,5435,7420,8504,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	72079937	72120793	chr17:72079937-72120793	0	-	72079937	72079937	789624	4	1464,121,123,31,	0,1983,3968,40825,
#Partially deleted in new
chr17	72081920	72089120	chr17:72081920-72089120	0	-	72081920	72081920	8553170	5	121,123,56,53,73,	0,1985,3069,4572,7127,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	72090458	72141780	chr17:72090458-72141780	1	-	72090458	72090458	8553170	2	646,96,	0,51226,
#Partially deleted in new
chr17	72090754	72119523	chr17:72090754-72119523	1	-	72090754	72090754	8553170	2	350,110,	0,28659,
#Partially deleted in new
chr17	72090820	72110548	chr17:72090820-72110548	1	-	72090820	72090820	8553170	2	284,159,	0,19569,
#Deleted in new
chr17	72110177	72110724	chr17:72110177-72110724	0	-	72110177	72110177	8553170	2	59,335,	0,212,
#Deleted in new
chr17	72121019	72126420	chr17:72121019-72126420	3	+	72121391	72124387	0	3	803,254,2878,	0,1699,2523,
#Deleted in new
chr17	72121032	72126420	chr17:72121032-72126420	1	+	72121391	72124387	0	3	790,254,2878,	0,1686,2510,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	72141385	72220718	chr17:72141385-72220718	0	-	72141385	72141385	8553170	3	396,108,73,	0,44068,79260,
#Partially deleted in new
chr17	72219945	72237203	chr17:72219945-72237203	1	-	72219945	72219945	8553170	3	82,1228,253,	0,700,17005,
#Deleted in new
chr17	72221129	72221836	chr17:72221129-72221836	1	-	72221129	72221129	8553170	2	252,213,	0,494,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	72290090	72592804	chr17:72290090-72592804	1	-	72290090	72290090	8553170	6	1459,590,118,63,97,602,	0,92952,111213,138145,141037,302112,
#Partially deleted in new
chr17	72290475	72592436	chr17:72290475-72592436	1	-	72290475	72290475	8553170	4	1074,63,97,234,	0,137760,140652,301727,
#Partially deleted in new
chr17	72323117	72334367	chr17:72323117-72334367	0	-	72323117	72323117	8553170	6	203,220,154,123,101,176,	0,1314,2675,3190,4878,11074,
#Partially deleted in new
chr17	72323117	72592692	chr17:72323117-72592692	2	-	72323117	72323117	8553170	4	203,63,97,490,	0,105118,108010,269085,
#Partially deleted in new
chr17	72323122	72339597	chr17:72323122-72339597	0	-	72323122	72323122	8553170	3	198,154,96,	0,2670,16379,
#Partially deleted in new
chr17	72323122	72339562	chr17:72323122-72339562	0	-	72323122	72323122	8553170	5	198,220,129,154,61,	0,1309,2266,2670,16379,
#Partially deleted in new
chr17	72323124	72592692	chr17:72323124-72592692	0	-	72323124	72323124	8553170	3	196,63,490,	0,105111,269078,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	72323129	72339577	chr17:72323129-72339577	0	-	72323129	72323129	8553170	7	191,129,220,174,154,101,76,	0,892,1302,2259,2663,4866,16372,
#Partially deleted in new
chr17	72323133	72339561	chr17:72323133-72339561	0	-	72323133	72323133	8553170	4	187,154,101,60,	0,2659,4862,16368,
#Partially deleted in new
chr17	72323133	72339577	chr17:72323133-72339577	1	-	72323133	72323133	8553170	7	187,220,129,154,70,101,76,	0,1298,2255,2659,3174,4862,16368,
#Partially deleted in new
chr17	72323138	72339602	chr17:72323138-72339602	0	-	72323138	72323138	8553170	4	182,220,154,101,	0,1293,2654,16363,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	72323138	72339562	chr17:72323138-72339562	0	-	72323138	72323138	8553170	5	182,129,220,154,61,	0,883,1293,2654,16363,
#Partially deleted in new
chr17	72323138	72592804	chr17:72323138-72592804	0	-	72323138	72323138	8553170	5	182,154,63,97,602,	0,2654,105097,107989,269064,
#Partially deleted in new
chr17	72323138	72592692	chr17:72323138-72592692	0	-	72323138	72323138	8553170	3	182,154,490,	0,2654,269064,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	72323141	72339547	chr17:72323141-72339547	0	-	72323141	72323141	8553170	6	179,129,220,129,154,46,	0,880,1290,2247,2651,16360,
#Partially deleted in new
chr17	72323141	72592692	chr17:72323141-72592692	0	-	72323141	72323141	8553170	2	179,490,	0,269061,
#Partially deleted in new
chr17	72323143	72501856	chr17:72323143-72501856	0	-	72323143	72323143	8553170	5	177,154,63,97,245,	0,2649,105092,107984,178468,
#Partially deleted in new
chr17	72323144	72339562	chr17:72323144-72339562	0	-	72323144	72323144	8553170	6	176,220,154,123,101,61,	0,1287,2648,3163,4851,16357,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	72323154	72339577	chr17:72323154-72339577	0	-	72323154	72323154	8553170	7	166,408,220,154,123,101,76,	0,588,1277,2638,3153,4841,16347,
#Partially deleted in new
chr17	72323154	72349484	chr17:72323154-72349484	0	-	72323154	72323154	8553170	3	166,154,135,	0,2638,26195,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	72323154	72342570	chr17:72323154-72342570	1	-	72323154	72323154	8553170	8	166,129,220,154,123,101,136,465,	0,867,1277,2638,3153,4841,17884,18951,
#Partially deleted in new
chr17	72323157	72339568	chr17:72323157-72339568	1	-	72323157	72323157	8553170	4	163,112,154,67,	0,1382,2635,16344,
#Partially deleted in new
chr17	72323157	72342556	chr17:72323157-72342556	0	-	72323157	72323157	8553170	6	163,220,154,101,136,432,	0,1274,2635,4838,17881,18967,
#Partially deleted in new
chr17	72323157	72339562	chr17:72323157-72339562	0	-	72323157	72323157	8553170	7	163,220,129,154,123,101,61,	0,1274,2231,2635,3150,4838,16344,
#Partially deleted in new
chr17	72323157	72339577	chr17:72323157-72339577	0	-	72323157	72323157	8553170	6	163,220,129,154,101,76,	0,1274,2231,2635,4838,16344,
#Partially deleted in new
chr17	72323158	72342557	chr17:72323158-72342557	1	-	72323158	72323158	8553170	7	162,220,154,123,101,136,433,	0,1273,2634,3149,4837,17880,18966,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	72323160	72339567	chr17:72323160-72339567	1	-	72323160	72323160	8553170	6	160,408,220,129,154,66,	0,582,1271,2228,2632,16341,
#Partially deleted in new
chr17	72323162	72339602	chr17:72323162-72339602	0	-	72323162	72323162	8553170	5	158,220,154,101,101,	0,1269,2630,4833,16339,
#Partially deleted in new
chr17	72323164	72342578	chr17:72323164-72342578	1	-	72323164	72323164	8553170	9	156,220,174,154,101,68,269,136,473,	0,1267,2224,2628,4831,16337,17134,17874,18941,
#Partially deleted in new
chr17	72324569	72340500	chr17:72324569-72340500	0	-	72324569	72324569	8553170	5	82,129,154,101,202,	0,819,1223,3426,15729,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	72342939	72355136	chr17:72342939-72355136	3	+	72342939	72342939	789624	4	1203,177,221,232,	0,10790,11067,11965,
#Partially deleted in new
chr17	72358069	72592368	chr17:72358069-72592368	1	-	72358069	72358069	8553170	4	876,63,97,166,	0,70166,73058,234133,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	72381947	72385137	chr17:72381947-72385137	1	-	72381947	72381947	8553170	2	1685,93,	0,3097,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	72384301	72592804	chr17:72384301-72592804	0	-	72384301	72384301	8553170	5	836,118,63,97,602,	0,17002,43934,46826,207901,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	72400848	72592692	chr17:72400848-72592692	0	-	72400848	72400848	8553170	3	573,63,490,	0,27387,191354,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	72403321	72592692	chr17:72403321-72592692	0	-	72403321	72403321	789624	5	1495,265,63,97,490,	0,17378,24914,27806,188881,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	72403321	72592804	chr17:72403321-72592804	0	-	72403321	72403321	789624	4	1495,367,63,602,	0,17378,24914,188881,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	72403321	72592804	chr17:72403321-72592804	0	-	72403321	72403321	789624	3	1495,63,602,	0,24914,188881,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	72403321	72592804	chr17:72403321-72592804	0	-	72403321	72403321	789624	4	1495,63,97,602,	0,24914,27806,188881,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	72403321	72421304	chr17:72403321-72421304	1	-	72403321	72403321	8553170	3	1495,367,133,	0,17378,17850,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	72403321	72423047	chr17:72403321-72423047	0	-	72403321	72403321	8553170	3	1495,265,301,	0,17378,19425,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	72403321	72501844	chr17:72403321-72501844	0	-	72403321	72403321	8553170	4	1495,63,97,233,	0,24914,27806,98290,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	72403326	72483053	chr17:72403326-72483053	0	-	72403326	72403326	8553170	3	1490,63,73,	0,24909,79654,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	72403326	72423026	chr17:72403326-72423026	0	-	72403326	72403326	8553170	2	1490,242,	0,19458,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	72403326	72519580	chr17:72403326-72519580	0	-	72403326	72403326	8553170	3	1490,63,137,	0,24909,116117,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	72403326	72423079	chr17:72403326-72423079	0	-	72403326	72403326	8553170	2	1490,333,	0,19420,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	72403326	72470372	chr17:72403326-72470372	1	-	72403326	72403326	8553170	5	1490,265,63,82,314,	0,17373,24909,66248,66732,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	72403326	72589317	chr17:72403326-72589317	0	-	72403326	72403326	8553170	4	1490,63,97,243,	0,24909,27801,185748,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	72403326	72421387	chr17:72403326-72421387	0	-	72403326	72403326	8553170	3	1490,265,33,	0,17373,18028,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	72403326	72516954	chr17:72403326-72516954	0	-	72403326	72403326	8553170	4	1490,63,97,165,	0,24909,27801,113463,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	72403326	72603215	chr17:72403326-72603215	0	-	72403326	72403326	8553170	5	1490,265,63,97,113,	0,17373,24909,27801,199776,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	72403326	72603231	chr17:72403326-72603231	0	-	72403326	72403326	8553170	3	1490,63,129,	0,24909,199776,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	72403326	72470468	chr17:72403326-72470468	0	-	72403326	72403326	8553170	4	1490,63,97,410,	0,24909,27801,66732,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	72403326	72603162	chr17:72403326-72603162	0	-	72403326	72403326	8553170	5	1490,63,97,62,60,	0,24909,27801,129983,199776,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	72403326	72470583	chr17:72403326-72470583	0	-	72403326	72403326	8553170	3	1490,63,525,	0,24909,66732,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	72403327	72465920	chr17:72403327-72465920	0	-	72403327	72403327	8553170	4	1489,63,97,93,	0,24908,27800,62500,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	72403327	72430679	chr17:72403327-72430679	1	-	72403327	72403327	8553170	4	1489,265,63,357,	0,17372,24908,26995,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	72403328	72604225	chr17:72403328-72604225	0	-	72403328	72403328	8553170	5	1488,63,97,706,176,	0,24907,27799,199774,200721,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	72403328	72603170	chr17:72403328-72603170	1	-	72403328	72403328	8553170	5	1488,63,97,172,68,	0,24907,27799,183325,199774,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	72403328	72592692	chr17:72403328-72592692	0	-	72403328	72403328	8553170	2	1488,490,	0,188874,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	72403329	72516952	chr17:72403329-72516952	1	-	72403329	72403329	8553170	3	1487,63,163,	0,24906,113460,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	72403330	72422913	chr17:72403330-72422913	1	-	72403330	72403330	8553170	2	1486,2214,	0,17369,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	72403342	72592692	chr17:72403342-72592692	1	-	72403342	72403342	789624	4	1474,265,63,490,	0,17357,24893,188860,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	72403342	72470366	chr17:72403342-72470366	0	-	72403342	72403342	8553170	5	1474,265,63,97,308,	0,17357,24893,27785,66716,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	72403364	72421378	chr17:72403364-72421378	1	-	72403364	72403364	8553170	3	1452,367,24,	0,17335,17990,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	72403440	72517092	chr17:72403440-72517092	1	-	72403440	72403440	8553170	4	1376,63,97,41,	0,24795,27687,113611,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	72403569	72423108	chr17:72403569-72423108	1	-	72403569	72403569	8553170	3	1247,265,324,	0,17130,19215,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	72403835	72603147	chr17:72403835-72603147	1	-	72403835	72403835	8553170	6	981,265,63,97,105,45,	0,16864,24400,27292,103338,199267,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	72404521	72445119	chr17:72404521-72445119	0	-	72404521	72404521	8553170	4	295,63,97,106,	0,23714,26606,40492,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	72404557	72501680	chr17:72404557-72501680	0	-	72404557	72404557	8553170	4	259,265,63,69,	0,16142,23678,97054,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	72404557	72502334	chr17:72404557-72502334	0	-	72404557	72404557	8553170	5	259,265,63,97,105,	0,16142,23678,26570,97672,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	72404659	72421224	chr17:72404659-72421224	0	-	72404659	72404659	8553170	3	157,265,53,	0,16040,16512,
#Partially deleted in new
chr17	72404767	72407568	chr17:72404767-72407568	0	-	72404767	72404767	8553170	2	49,68,	0,2733,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	72419225	72423235	chr17:72419225-72423235	1	-	72419225	72419225	8553170	3	1841,294,451,	0,2543,3559,
#Deleted in new
chr17	72420677	72423188	chr17:72420677-72423188	0	-	72420677	72420677	8553170	2	287,404,	0,2107,
#Partially deleted in new
chr17	72421828	72428247	chr17:72421828-72428247	1	-	72421828	72421828	8553170	3	234,286,12,	0,956,6407,
#Deleted in new
chr17	72425938	72428852	chr17:72425938-72428852	3	+	72425938	72425938	8553170	2	244,589,	0,2325,
#Partially deleted in new
chr17	72427333	72592692	chr17:72427333-72592692	0	-	72427333	72427333	8553170	3	965,97,490,	0,3794,164869,
#Partially deleted in new
chr17	72427333	72592692	chr17:72427333-72592692	0	-	72427333	72427333	8553170	2	965,490,	0,164869,
#Partially deleted in new
chr17	72428235	72592802	chr17:72428235-72592802	0	-	72428235	72428235	8553170	5	63,97,95,172,600,	0,2892,154808,158418,163967,
#Partially deleted in new
chr17	72428266	72488797	chr17:72428266-72488797	0	-	72428266	72428266	8553170	3	32,97,79,	0,2861,60452,
#Partially deleted in new
chr17	72428266	72603509	chr17:72428266-72603509	1	-	72428266	72428266	8553170	5	32,97,62,103,407,	0,2861,105043,105708,174836,
#Partially deleted in new
chr17	72428266	72469618	chr17:72428266-72469618	0	-	72428266	72428266	8553170	3	32,97,44,	0,2861,41308,
#Partially deleted in new
chr17	72428266	72502308	chr17:72428266-72502308	0	-	72428266	72428266	8553170	2	32,79,	0,73963,
#Partially deleted in new
chr17	72428266	72501846	chr17:72428266-72501846	0	-	72428266	72428266	8553170	3	32,97,90,	0,2861,73490,
#Partially deleted in new
chr17	72428266	72583759	chr17:72428266-72583759	0	-	72428266	72428266	8553170	4	32,97,95,37,	0,2861,154777,155456,
#Partially deleted in new
chr17	72428266	72516812	chr17:72428266-72516812	0	-	72428266	72428266	8553170	3	32,97,137,	0,2861,88409,
#Partially deleted in new
chr17	72428266	72603147	chr17:72428266-72603147	0	-	72428266	72428266	8553170	4	32,97,56,45,	0,2861,170822,174836,
#Partially deleted in new
chr17	72428266	72574867	chr17:72428266-72574867	0	-	72428266	72428266	8553170	3	32,97,380,	0,2861,146221,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	72428266	72431603	chr17:72428266-72431603	0	-	72428266	72428266	8553170	2	32,476,	0,2861,
#Partially deleted in new
chr17	72428266	72488794	chr17:72428266-72488794	0	-	72428266	72428266	8553170	2	32,76,	0,60452,
#Partially deleted in new
chr17	72428266	72592692	chr17:72428266-72592692	0	-	72428266	72428266	8553170	4	32,97,172,490,	0,2861,158387,163936,
#Partially deleted in new
chr17	72428266	72432176	chr17:72428266-72432176	0	-	72428266	72428266	8553170	3	32,97,196,	0,2861,3714,
#Partially deleted in new
chr17	72428266	72488315	chr17:72428266-72488315	0	-	72428266	72428266	8553170	3	32,97,102,	0,2861,59947,
#Partially deleted in new
chr17	72428266	72527035	chr17:72428266-72527035	0	-	72428266	72428266	8553170	3	32,97,563,	0,2861,98206,
#Partially deleted in new
chr17	72428266	72587040	chr17:72428266-72587040	0	-	72428266	72428266	8553170	3	32,95,387,	0,154777,158387,
#Partially deleted in new
chr17	72428266	72592692	chr17:72428266-72592692	0	-	72428266	72428266	8553170	3	32,95,490,	0,154777,163936,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	72462856	72466622	chr17:72462856-72466622	0	-	72462856	72462856	8553170	1	3766,	0,
#Partially deleted in new
chr17	72583001	72592673	chr17:72583001-72592673	0	-	72583001	72583001	8553170	3	137,172,471,	0,3652,9201,
#Partially deleted in new
chr17	72586626	72592692	chr17:72586626-72592692	0	-	72586626	72586626	8553170	2	199,490,	0,5576,
#Deleted in new
chr17	72590443	72592692	chr17:72590443-72592692	0	-	72590443	72590443	8553170	2	306,490,	0,1759,
#Deleted in new
chr17	72591499	72592692	chr17:72591499-72592692	0	-	72591499	72591499	8553170	2	555,490,	0,703,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	72598040	72640472	chr17:72598040-72640472	1	-	72598040	72598040	789624	5	1104,706,249,104,102,	0,5062,20275,40706,42330,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	72598040	72618401	chr17:72598040-72618401	1	-	72598040	72598040	8553170	3	1096,723,86,	0,5062,20275,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	72598097	72615134	chr17:72598097-72615134	1	-	72598097	72598097	8553170	3	1047,706,178,	0,5005,16859,
#Partially deleted in new
chr17	72598558	72604932	chr17:72598558-72604932	1	-	72598558	72598558	8553170	3	586,706,59,	0,4544,6315,
#Partially deleted in new
chr17	72598933	72605111	chr17:72598933-72605111	0	-	72598933	72598933	8553170	3	203,706,238,	0,4169,5940,
#Partially deleted in new
chr17	72603087	72618413	chr17:72603087-72618413	0	-	72603087	72603087	8553170	2	721,98,	0,15228,
#Deleted in new
chr17	72627230	72627624	chr17:72627230-72627624	7	+	72627230	72627230	16724991	1	394,	0,
#Partially deleted in new
chr17	72642730	72644490	chr17:72642730-72644490	3	+	72642730	72642730	8553170	2	99,790,	0,970,
#Partially deleted in new
chr17	72645948	73092693	chr17:72645948-73092693	3	-	72647583	73088764	789624	10	1714,159,99,70,171,124,159,39,119,83,	0,2854,3221,90701,203685,301803,385607,438859,442708,446662,
#Partially deleted in new
chr17	72645949	73092688	chr17:72645949-73092688	1	-	72647583	73088764	789624	10	1713,159,99,70,171,145,159,39,119,78,	0,2853,3220,90700,203684,301781,385606,438858,442707,446661,
#Partially deleted in new
chr17	72647108	72725614	chr17:72647108-72725614	0	-	72647108	72647108	8553170	4	554,159,99,98,	0,1694,2061,78408,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	72648922	72992933	chr17:72648922-72992933	0	-	72648922	72992923	789624	6	39,99,70,171,145,43,	0,247,87727,200711,298808,343968,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	72663822	72664152	chr17:72663822-72664152	3	-	72663822	72663822	8553170	1	330,	0,
#Partially deleted in new
chr17	72712738	72849706	chr17:72712738-72849706	0	-	72712935	72849706	789624	3	243,70,73,	0,23911,136895,
#Deleted in new
chr17	72818835	72818972	chr17:72818835-72818972	3	-	72818835	72818835	8553170	1	137,	0,
#Partially deleted in new
chr17	72821604	72849804	chr17:72821604-72849804	0	-	72821819	72849804	789624	2	418,171,	0,28029,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	72823697	72992932	chr17:72823697-72992932	0	-	72947662	72992923	789624	4	186,171,348,42,	0,25936,123830,169193,
#Partially deleted in new
chr17	72837799	73092681	chr17:72837799-73092681	1	-	72838037	73088764	789624	7	321,171,124,159,39,119,71,	0,11834,109952,193756,247008,250857,254811,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	72839038	72839718	chr17:72839038-72839718	3	+	72839038	72839038	8553170	2	259,365,	0,315,
#Partially deleted in new
chr17	72849633	73092676	chr17:72849633-73092676	0	-	72849633	73088764	789624	6	171,124,159,39,119,182,	0,98118,181922,235174,239023,242861,
#Partially deleted in new
chr17	72849785	73089764	chr17:72849785-73089764	0	-	72849785	73088764	789624	6	19,145,159,39,119,51,	0,97945,181770,235022,238871,239928,
#Partially deleted in new
chr17	72947662	73092687	chr17:72947662-73092687	0	-	72947662	72947662	8553170	4	213,159,119,77,	0,83893,140994,144948,
#Deleted in new
chr17	73067869	73068288	chr17:73067869-73068288	7	-	73067869	73067869	16724991	1	419,	0,
#Partially deleted in new
chr17	73072268	73092678	chr17:73072268-73092678	0	-	73072268	73072268	8553170	5	272,169,39,119,68,	0,1398,12539,16388,20342,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	73084834	73092712	chr17:73084834-73092712	0	-	73084834	73088764	789624	4	12,119,293,102,	0,3822,6989,7776,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	73088687	73092687	chr17:73088687-73092687	0	-	73088687	73088764	789624	3	88,293,193,	0,3136,3807,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	73091838	73092710	chr17:73091838-73092710	0	-	73091838	73091838	8553170	2	458,100,	0,772,
#Deleted in new
chr17	73163034	73163359	chr17:73163034-73163359	7	-	73163034	73163034	16724991	1	325,	0,
#Partially deleted in new
chr17	73164976	73196593	chr17:73164976-73196593	3	+	73164976	73164976	8553170	3	312,189,87,	0,22862,31530,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	73165011	73176633	chr17:73165011-73176633	3	+	73169319	73170429	789624	2	277,7406,	0,4216,
#Partially deleted in new
chr17	73165011	73169311	chr17:73165011-73169311	0	+	73165011	73165011	8553170	3	277,169,84,	0,2954,4216,
#Partially deleted in new
chr17	73192631	73208503	chr17:73192631-73208503	1	+	73193069	73207719	789624	16	200,451,245,182,171,157,211,792,147,162,128,109,110,76,38,190,	0,302,3875,4268,4594,7233,7934,8477,10368,11000,12921,13522,14076,14549,15070,15682,
#Partially deleted in new
chr17	73192989	73208507	chr17:73192989-73208507	3	+	73193069	73208451	789624	14	395,245,182,171,157,211,792,147,162,128,109,110,76,194,	0,3517,3910,4236,6875,7576,8119,10010,10642,12563,13164,13718,14191,15324,
#Partially deleted in new
chr17	73193071	73208504	chr17:73193071-73208504	0	+	73193071	73207340	789624	13	313,245,182,171,157,211,792,147,162,128,109,110,1324,	0,3435,3828,4154,6793,7494,8037,9928,10560,12481,13082,13636,14109,
#Partially deleted in new
chr17	73193092	73197081	chr17:73193092-73197081	0	+	73193092	73196567	789624	3	292,265,182,	0,3394,3807,
#Partially deleted in new
chr17	73202967	73203431	chr17:73202967-73203431	3	-	73202967	73202967	8553170	1	464,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	73205135	73206188	chr17:73205135-73206188	0	+	73205135	73205135	8553170	2	545,35,	0,1018,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	73205570	73207089	chr17:73205570-73207089	0	+	73205570	73205570	8553170	3	110,109,382,	0,583,1137,
#Partially deleted in new
chr17	73205614	73208420	chr17:73205614-73208420	0	+	73205614	73207719	789624	6	66,109,110,76,38,107,	0,539,1093,1566,2087,2699,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	73205937	73207089	chr17:73205937-73207089	0	+	73205937	73205937	8553170	2	325,382,	0,770,
#Partially deleted in new
chr17	73206158	73207931	chr17:73206158-73207931	0	+	73206158	73207719	789624	4	104,110,76,230,	0,549,1022,1543,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	73206740	73208507	chr17:73206740-73208507	0	+	73206740	73206821	789624	3	168,76,194,	0,440,1573,
#Partially deleted in new
chr17	73207352	73232367	chr17:73207352-73232367	3	-	73209528	73232306	789624	3	2416,100,282,	0,19812,24733,
#Partially deleted in new
chr17	73207352	73232371	chr17:73207352-73232371	1	-	73209528	73232306	789624	4	2416,63,100,286,	0,5325,19812,24733,
#Partially deleted in new
chr17	73209487	73236753	chr17:73209487-73236753	0	-	73209487	73209487	8553170	3	281,100,182,	0,17677,27084,
#Partially deleted in new
chr17	73209507	73227748	chr17:73209507-73227748	1	-	73209528	73212728	789624	4	261,63,100,27,	0,3170,17657,18214,
#Partially deleted in new
chr17	73209565	73232394	chr17:73209565-73232394	1	-	73209677	73232306	789624	2	203,309,	0,22520,
#Partially deleted in new
chr17	73209574	73227700	chr17:73209574-73227700	0	-	73209574	73227655	789624	4	194,63,100,65,	0,3103,17590,18061,
#Partially deleted in new
chr17	73209604	73232320	chr17:73209604-73232320	1	-	73209677	73232306	789624	3	164,18,235,	0,17560,22481,
#Partially deleted in new
chr17	73232232	73245339	chr17:73232232-73245339	1	+	73235482	73245190	789624	5	257,106,1520,108,172,	0,987,3243,10663,12935,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	73232464	73247530	chr17:73232464-73247530	1	+	73235482	73247341	789624	5	25,106,1520,108,290,	0,755,3011,10431,14776,
#Partially deleted in new
chr17	73232528	73235810	chr17:73232528-73235810	0	+	73235482	73235810	789624	3	101,106,335,	0,691,2947,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	73232621	73248947	chr17:73232621-73248947	3	+	73235482	73247341	789624	6	96,106,1520,108,108,1707,	0,598,2854,9622,10274,14619,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	73232636	73248874	chr17:73232636-73248874	1	+	73235482	73247341	789624	5	81,106,1520,108,1634,	0,583,2839,10259,14604,
#Partially deleted in new
chr17	73232661	73245344	chr17:73232661-73245344	1	+	73235482	73245190	789624	6	56,106,1520,108,108,177,	0,558,2814,9582,10234,12506,
#Partially deleted in new
chr17	73232728	73236022	chr17:73232728-73236022	0	+	73235482	73236022	789624	2	597,547,	0,2747,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	73233219	73247527	chr17:73233219-73247527	1	+	73235482	73247341	789624	5	106,1520,108,108,287,	0,2256,9024,9676,14021,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	73233225	73247455	chr17:73233225-73247455	1	+	73242323	73247341	789624	4	100,108,108,215,	0,9018,9670,14015,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	73243092	73244706	chr17:73243092-73244706	3	+	73243092	73243092	8553170	2	107,214,	0,1400,
#Partially deleted in new
chr17	73248448	73261880	chr17:73248448-73261880	3	-	73248493	73261818	789624	6	88,94,96,153,51,165,	0,4181,5482,9232,12484,13267,
#Partially deleted in new
chr17	73249792	73262352	chr17:73249792-73262352	1	-	73250275	73257795	789624	7	499,135,97,96,153,51,244,	0,1180,2837,4138,7888,11140,12316,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	73283623	73312175	chr17:73283623-73312175	3	-	73285429	73286500	789624	2	2989,283,	0,28269,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	73283624	73311993	chr17:73283624-73311993	1	-	73285429	73286500	789624	3	2498,280,101,	0,2708,28268,
#Partially deleted in new
chr17	73285177	73311997	chr17:73285177-73311997	1	-	73285457	73286500	789624	3	403,229,105,	0,1206,26715,
#Partially deleted in new
chr17	73285457	73286500	chr17:73285457-73286500	1	-	73285457	73286500	789624	2	123,117,	0,926,
#Partially deleted in new
chr17	73286118	73311408	chr17:73286118-73311408	0	-	73286118	73286500	789624	2	494,528,	0,24762,
#Partially deleted in new
chr17	73286281	73312001	chr17:73286281-73312001	0	-	73286281	73286500	789624	3	331,140,109,	0,432,25611,
#Partially deleted in new
chr17	73286517	73310198	chr17:73286517-73310198	0	-	73286517	73286517	8553170	2	95,444,	0,23237,
#Partially deleted in new
chr17	73306697	73309895	chr17:73306697-73309895	0	-	73306697	73306697	8553170	3	387,132,141,	0,485,3057,
#Deleted in new
chr17	73311053	73312005	chr17:73311053-73312005	0	-	73311053	73311053	8553170	2	459,113,	0,839,
#Partially deleted in new
chr17	73334383	73644089	chr17:73334383-73644089	3	-	73338586	73644088	0	45	4557,127,139,141,165,126,162,138,187,116,102,57,136,71,104,202,195,99,190,116,238,151,110,122,192,99,196,116,182,141,148,137,177,103,168,117,195,84,191,112,134,148,107,160,65,	0,14215,15853,16266,18089,23695,27300,30874,34023,44793,45064,46510,49492,51463,52061,53452,55903,57056,59176,59825,60771,63651,63936,64784,66636,67270,67562,80260,81427,84782,87903,89002,89532,96127,97118,99348,101066,103355,103580,106428,113231,121522,137728,173054,309641,
#Partially deleted in new
chr17	73337938	73414655	chr17:73337938-73414655	0	-	73338586	73414655	789624	27	1002,127,139,141,165,126,162,138,187,116,102,136,71,104,202,195,99,190,116,238,151,110,122,192,99,196,12,	0,10660,12298,12711,14534,20140,23745,27319,30468,41238,41509,45937,47908,48506,49897,52348,53501,55621,56270,57216,60096,60381,61229,63081,63715,64007,76705,
#Partially deleted in new
chr17	73338442	73369213	chr17:73338442-73369213	0	-	73338442	73338442	8553170	10	498,127,139,141,165,126,162,138,187,53,	0,10156,11794,12207,14030,19636,23241,26815,29964,30718,
#Partially deleted in new
chr17	73357369	73437769	chr17:73357369-73437769	0	-	73357369	73357369	8553170	33	835,162,138,187,116,102,57,136,71,104,202,195,99,190,116,238,151,110,122,192,99,196,116,182,141,148,137,177,103,168,117,195,31,	0,4314,7888,11037,21807,22078,23524,26506,28477,29075,30466,32917,34070,36190,36839,37785,40665,40950,41798,43650,44284,44576,57274,58441,61796,64917,66016,66546,73141,74132,76362,78080,80369,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	73504339	73507594	chr17:73504339-73507594	0	-	73504339	73504339	8553170	2	122,157,	0,3098,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	73513468	73518763	chr17:73513468-73518763	0	+	73513468	73513468	8553170	2	322,2160,	0,3135,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	73513611	73518770	chr17:73513611-73518770	0	+	73513611	73513611	789624	2	179,2170,	0,2989,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	73513611	73521407	chr17:73513611-73521407	3	+	73513611	73513611	8553170	3	179,1790,2346,	0,2989,5450,
#Partially deleted in new
chr17	73641025	73643106	chr17:73641025-73643106	3	+	73641025	73641025	8553170	2	103,70,	0,2011,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	73662567	73663848	chr17:73662567-73663848	3	-	73662567	73662567	8553170	2	379,24,	0,1257,
#Partially deleted in new
chr17	73737853	73756557	chr17:73737853-73756557	3	+	73737853	73737853	8553170	6	102,64,143,336,247,248,	0,5174,12731,13191,17820,18456,
#Partially deleted in new
chr17	73750329	73828520	chr17:73750329-73828520	3	-	73750329	73750329	8553170	4	405,92,138,73,	0,10605,73358,78118,
#Partially deleted in new
chr17	73750329	73828520	chr17:73750329-73828520	0	-	73750329	73750329	5263520	4	169,92,138,73,	0,10605,73358,78118,
#Partially deleted in new
chr17	73761003	73776757	chr17:73761003-73776757	1	-	73761003	73761003	8553170	2	23,560,	0,15194,
#Partially deleted in new
chr17	73786801	73790716	chr17:73786801-73790716	0	+	73786801	73786801	8553170	2	570,154,	0,3761,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	73786821	73800793	chr17:73786821-73800793	3	+	73786821	73786821	789624	7	993,123,148,90,323,439,356,	0,3230,3741,4891,7503,12408,13616,
#Partially deleted in new
chr17	73831571	73836019	chr17:73831571-73836019	3	-	73831571	73831571	8553170	3	392,118,73,	0,2747,4375,
#Deleted in new
chr17	73834766	73835979	chr17:73834766-73835979	1	-	73834766	73834766	8553170	2	444,33,	0,1180,
#Partially deleted in new
chr17	73894748	73911878	chr17:73894748-73911878	3	-	73894748	73894748	8553170	2	294,125,	0,17005,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	74043451	74112899	chr17:74043451-74112899	1	-	74043451	74043451	8553170	4	58,155,102,254,	0,47570,63428,69194,
#Partially deleted in new
chr17	74203581	74209880	chr17:74203581-74209880	1	+	74203955	74209829	0	5	129,41,61,123,77,	0,336,548,5605,6222,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	74203652	74210655	chr17:74203652-74210655	3	+	74203955	74209829	0	5	93,41,61,123,852,	0,265,477,5534,6151,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	74203661	74206283	chr17:74203661-74206283	0	+	74203661	74203661	8553170	2	84,2366,	0,256,
#Deleted in new
chr17	74203674	74204593	chr17:74203674-74204593	0	+	74203674	74203674	8553170	3	71,41,464,	0,243,455,
#Partially deleted in new
chr17	74203692	74209878	chr17:74203692-74209878	1	+	74203955	74209829	789624	5	53,41,61,123,66,	0,225,437,5494,6120,
#Partially deleted in new
chr17	74203693	74209461	chr17:74203693-74209461	1	+	74203955	74209317	789624	4	52,41,61,275,	0,224,436,5493,
#Deleted in new
chr17	74203703	74204190	chr17:74203703-74204190	0	+	74203955	74204190	789624	3	67,41,61,	0,214,426,
#Partially deleted in new
chr17	74203703	74209896	chr17:74203703-74209896	1	+	74203955	74209829	0	4	255,61,123,93,	0,426,5483,6100,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	74209979	74213321	chr17:74209979-74213321	3	-	74209979	74209979	789624	2	1703,798,	0,2544,
#Deleted in new
chr17	74211485	74213342	chr17:74211485-74213342	0	-	74211485	74211485	8553170	2	197,391,	0,1466,
#Deleted in new
chr17	74212673	74213308	chr17:74212673-74213308	0	-	74212673	74212673	8553170	2	440,96,	0,539,
#Partially deleted in new
chr17	74213513	74262020	chr17:74213513-74262020	3	+	74213587	74260209	789624	14	203,173,112,221,96,73,70,56,93,93,143,186,79,1892,	0,8971,17374,23780,29860,30463,35497,35830,36422,36751,38720,39567,40241,46615,
#Partially deleted in new
chr17	74215615	74260651	chr17:74215615-74260651	1	+	74215646	74260209	789624	14	97,173,112,221,96,73,70,56,93,93,143,186,79,523,	0,6869,15272,21678,27758,28361,33395,33728,34320,34649,36618,37465,38139,44513,
#Partially deleted in new
chr17	74222643	74244073	chr17:74222643-74244073	0	+	74222643	74222643	8553170	5	14,112,221,96,97,	0,8244,14650,20730,21333,
#Partially deleted in new
chr17	74240799	74250014	chr17:74240799-74250014	0	+	74240799	74240799	8553170	6	172,96,73,70,56,79,	0,2574,3177,8211,8544,9136,
#Partially deleted in new
chr17	74243373	74252288	chr17:74243373-74252288	0	+	74243373	74250295	789624	7	96,73,70,56,93,89,55,	0,603,5637,5970,6562,6895,8860,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	74247957	74262016	chr17:74247957-74262016	1	+	74249968	74260209	789624	8	1123,56,93,93,143,186,79,1888,	0,1386,1978,2307,4276,5123,5797,12171,
#Partially deleted in new
chr17	74249323	74253246	chr17:74249323-74253246	0	+	74249323	74249323	8553170	5	76,93,93,143,166,	0,612,941,2910,3757,
#Partially deleted in new
chr17	74249364	74250730	chr17:74249364-74250730	0	+	74249364	74249364	8553170	3	35,93,466,	0,571,900,
#Partially deleted in new
chr17	74249956	74260206	chr17:74249956-74260206	0	+	74249956	74252336	789624	7	72,93,146,143,186,79,78,	0,308,1912,2277,3124,3798,10172,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	74256895	74262020	chr17:74256895-74262020	3	-	74256895	74256895	8553170	2	81,432,	0,4693,
#Partially deleted in new
chr17	74274246	74314884	chr17:74274246-74314884	1	+	74281817	74314216	789624	14	99,191,162,122,143,114,140,123,224,136,111,228,151,296,	0,7563,10793,12730,15347,16773,25471,26799,30972,35006,35806,37756,39874,40342,
#Partially deleted in new
chr17	74274255	74314884	chr17:74274255-74314884	0	+	74281817	74291038	789624	13	90,194,162,143,114,140,123,224,136,147,73,151,296,	0,7551,10784,15338,16764,25462,26790,30963,34997,35761,37747,39865,40333,
#Partially deleted in new
chr17	74274289	74314884	chr17:74274289-74314884	3	+	74281817	74314216	789624	14	56,194,162,122,143,114,140,123,224,136,147,228,151,296,	0,7517,10750,12687,15304,16730,25428,26756,30929,34963,35727,37713,39831,40299,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	74281511	74314883	chr17:74281511-74314883	1	+	74281817	74314216	789624	13	489,162,122,143,114,140,123,224,136,147,228,151,295,	0,3528,5465,8082,9508,18206,19534,23707,27741,28505,30491,32609,33077,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	74281511	74314884	chr17:74281511-74314884	1	+	74281646	74314216	789624	13	489,162,122,143,114,140,123,224,136,147,228,151,296,	0,3528,5465,8082,9508,18206,19534,23707,27741,28505,30491,32609,33077,
#Partially deleted in new
chr17	74307209	74309790	chr17:74307209-74309790	3	-	74307209	74307209	8553170	2	129,522,	0,2059,
#Deleted in new
chr17	74313843	74314880	chr17:74313843-74314880	0	+	74313843	74313843	8553170	2	428,292,	0,745,
#Partially deleted in new
chr17	74326209	74352326	chr17:74326209-74352326	0	+	74326349	74352326	789624	13	179,81,111,88,137,195,147,123,166,175,199,271,108,	0,2215,15666,16420,16814,18551,20168,21567,22974,24191,24497,25657,26009,
#Partially deleted in new
chr17	74326211	74355820	chr17:74326211-74355820	3	+	74326349	74355312	789624	20	177,81,111,88,137,126,195,147,123,166,175,199,271,122,134,106,88,398,160,639,	0,2213,15664,16418,16812,18011,18549,20166,21565,22972,24189,24495,25655,26007,26609,26984,27282,27950,28570,28970,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	74326225	74329466	chr17:74326225-74329466	0	+	74326225	74326225	8553170	2	163,1042,	0,2199,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	74326230	74351345	chr17:74326230-74351345	0	+	74326230	74326230	8553170	11	158,81,111,88,137,195,147,123,166,175,639,	0,2194,15645,16399,16793,18530,20147,21546,22953,24170,24476,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	74326256	74351319	chr17:74326256-74351319	0	+	74326256	74326256	8553170	12	132,81,111,88,137,126,195,147,123,166,175,613,	0,2168,15619,16373,16767,17966,18504,20121,21520,22927,24144,24450,
#Partially deleted in new
chr17	74348589	74350481	chr17:74348589-74350481	0	+	74348589	74348589	8553170	2	760,81,	0,1811,
#Partially deleted in new
chr17	74356415	74361946	chr17:74356415-74361946	3	-	74356656	74361819	789624	3	1316,277,212,	0,3553,5319,
#Partially deleted in new
chr17	74367406	74372622	chr17:74367406-74372622	0	+	74367505	74369484	789624	4	388,167,159,894,	0,2061,3114,4322,
#Partially deleted in new
chr17	74367457	74372600	chr17:74367457-74372600	3	+	74367505	74372600	789624	4	291,115,159,872,	0,2010,3063,4271,
#Partially deleted in new
chr17	74367457	74371840	chr17:74367457-74371840	0	+	74367505	74369620	789624	4	291,167,159,112,	0,2010,3063,4271,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	74417593	74417704	chr17:74417593-74417704	7	-	74417593	74417593	16724991	1	111,	0,
#Partially deleted in new
chr17	74424850	74440212	chr17:74424850-74440212	0	+	74439776	74440212	789624	2	82,468,	0,14894,
#Partially deleted in new
chr17	74430912	74447429	chr17:74430912-74447429	3	+	74432038	74447028	789624	4	1229,1083,95,581,	0,8832,12905,15936,
#Partially deleted in new
chr17	74431383	74447429	chr17:74431383-74447429	1	+	74440721	74447028	789624	4	452,145,95,581,	0,9299,12434,15465,
#Partially deleted in new
chr17	74431527	74447429	chr17:74431527-74447429	1	+	74432038	74443865	789624	4	614,302,95,581,	0,8217,12290,15321,
#Partially deleted in new
chr17	74432115	74449509	chr17:74432115-74449509	0	+	74432115	74449367	789624	5	26,1083,95,150,175,	0,7629,11702,14733,17219,
#Partially deleted in new
chr17	74432132	74439937	chr17:74432132-74439937	0	+	74432255	74439937	789624	2	391,193,	0,7612,
#Partially deleted in new
chr17	74433696	74447028	chr17:74433696-74447028	1	+	74433753	74447028	789624	4	61,1083,95,180,	0,6048,10121,13152,
#Partially deleted in new
chr17	74439895	74451653	chr17:74439895-74451653	0	+	74439895	74451165	789624	2	787,767,	0,10991,
#Partially deleted in new
chr17	74443076	74447088	chr17:74443076-74447088	0	+	74443076	74443076	8553170	3	58,95,240,	0,741,3772,
#Partially deleted in new
chr17	74443084	74450580	chr17:74443084-74450580	0	+	74443084	74443084	8553170	4	828,150,93,1246,	0,3764,5738,6250,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	74445203	74447427	chr17:74445203-74447427	0	+	74445203	74445203	8553170	1	2224,	0,
#Partially deleted in new
chr17	74466398	74484794	chr17:74466398-74484794	1	+	74474542	74484126	789624	7	257,339,154,95,38,108,794,	0,7137,8133,11037,14890,15327,17602,
#Partially deleted in new
chr17	74466415	74484796	chr17:74466415-74484796	3	+	74466703	74484126	0	7	328,339,154,95,38,108,796,	0,7120,8116,11020,14873,15310,17585,
#Partially deleted in new
chr17	74466657	74484790	chr17:74466657-74484790	1	+	74466703	74484126	0	5	86,154,95,38,790,	0,7874,10778,14631,17343,
#Partially deleted in new
chr17	74466674	74484167	chr17:74466674-74484167	1	+	74466703	74484126	0	6	69,154,95,38,108,167,	0,7857,10761,14614,15051,17326,
#Partially deleted in new
chr17	74466674	74484167	chr17:74466674-74484167	1	+	74466703	74484126	0	4	69,38,108,167,	0,14614,15051,17326,
#Partially deleted in new
chr17	74466675	74484168	chr17:74466675-74484168	0	+	74466675	74466675	8553170	6	68,339,154,95,545,168,	0,6860,7856,10760,14613,17325,
#Partially deleted in new
chr17	74466861	74484296	chr17:74466861-74484296	1	+	74474542	74484126	789624	8	132,297,339,154,95,38,108,296,	0,3084,6674,7670,10574,14427,14864,17139,
#Partially deleted in new
chr17	74521173	74531466	chr17:74521173-74531466	3	-	74522737	74531350	789624	4	1727,73,330,156,	0,2405,4574,10137,
#Partially deleted in new
chr17	74523152	74531474	chr17:74523152-74531474	1	-	74523574	74531350	789624	3	499,330,164,	0,2595,8158,
#Deleted in new
chr17	74541107	74546143	chr17:74541107-74546143	3	-	74541588	74545782	789624	4	629,127,339,422,	0,1753,3501,4614,
#Deleted in new
chr17	74549398	74552737	chr17:74549398-74552737	7	-	74549398	74549398	16724991	4	145,154,309,249,	0,1253,2271,3090,
#Partially deleted in new
chr17	74560700	74567343	chr17:74560700-74567343	3	-	74560700	74567343	789624	4	124,64,357,61,	0,2133,3218,6582,
#Partially deleted in new
chr17	74560780	74567343	chr17:74560780-74567343	1	-	74560780	74567343	789624	3	44,357,61,	0,3138,6502,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	74579364	74592283	chr17:74579364-74592283	3	-	74580001	74592202	789624	4	749,94,339,121,	0,2853,9146,12798,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	74584678	74592161	chr17:74584678-74592161	0	+	74584678	74584678	8553170	3	236,227,178,	0,5840,7305,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	74584917	74594209	chr17:74584917-74594209	3	+	74584917	74584917	8553170	3	72,227,2226,	0,5601,7066,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	74590501	74594209	chr17:74590501-74594209	0	+	74590501	74590501	8553170	2	244,2226,	0,1482,
#Partially deleted in new
chr17	74599839	74604269	chr17:74599839-74604269	1	+	74599839	74599839	8553170	2	109,420,	0,4010,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	74603736	74607229	chr17:74603736-74607229	1	+	74603736	74603736	8553170	1	3493,	0,
#Deleted in new
chr17	74606506	74607191	chr17:74606506-74607191	3	+	74606506	74606506	8553170	2	120,406,	0,279,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	74609886	74623738	chr17:74609886-74623738	3	-	74612652	74623621	789624	4	2887,109,348,157,	0,4038,7231,13695,
#Deleted in new
chr17	74617146	74619347	chr17:74617146-74619347	0	-	74617146	74619142	789624	2	319,251,	0,1950,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	74670577	74747334	chr17:74670577-74747334	1	+	74671586	74745088	789624	8	1081,111,42,67,53,66,57,2327,	0,58678,71676,72551,72710,73730,74295,74430,
#Partially deleted in new
chr17	74671140	74745874	chr17:74671140-74745874	3	+	74671586	74745411	789624	9	518,111,42,67,53,66,57,77,569,	0,58115,71113,71988,72147,73167,73732,73867,74165,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	74671179	74747335	chr17:74671179-74747335	0	+	74671179	74671179	8553170	6	479,111,42,67,53,3028,	0,58076,71074,71949,72108,73128,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	74672711	74677600	chr17:74672711-74677600	3	-	74672711	74672711	8553170	2	271,252,	0,4637,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	74694310	74705255	chr17:74694310-74705255	1	-	74695752	74705255	0	6	941,135,23,64,339,52,	0,1414,1884,8724,10167,10893,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	74694310	74705255	chr17:74694310-74705255	1	-	74695752	74705255	0	6	941,135,113,109,339,52,	0,1414,4058,8724,10167,10893,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	74694316	74712978	chr17:74694316-74712978	3	-	74695095	74712866	0	7	935,135,23,113,64,339,155,	0,1408,1878,4052,8718,10161,18507,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	74694316	74712978	chr17:74694316-74712978	1	-	74695752	74705255	0	7	935,135,23,64,339,174,155,	0,1408,1878,8718,10161,10887,18507,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	74694317	74712954	chr17:74694317-74712954	1	-	74695752	74712866	0	8	934,135,23,113,46,64,339,131,	0,1407,1877,4051,4258,8717,10160,18506,
#Partially deleted in new
chr17	74694813	74712941	chr17:74694813-74712941	1	-	74695095	74712866	789624	7	438,135,23,113,109,339,118,	0,911,1381,3555,8221,9664,18010,
#Partially deleted in new
chr17	74695036	74705310	chr17:74695036-74705310	0	-	74695816	74705255	0	5	215,135,64,339,107,	0,688,7998,9441,10167,
#Partially deleted in new
chr17	74695036	74705310	chr17:74695036-74705310	1	-	74695095	74705255	0	7	215,135,23,113,64,339,107,	0,688,1158,3332,7998,9441,10167,
#Partially deleted in new
chr17	74695752	74705255	chr17:74695752-74705255	1	-	74695752	74705255	0	5	107,113,109,339,52,	0,2616,7282,8725,9451,
#Partially deleted in new
chr17	74704351	74712925	chr17:74704351-74712925	0	-	74704351	74704351	8553170	2	465,102,	0,8472,
#Partially deleted in new
chr17	74736597	74746192	chr17:74736597-74746192	1	+	74736719	74745411	789624	9	134,111,42,67,53,66,57,77,887,	0,4170,5656,6531,6690,7710,8275,8410,8708,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	74736819	74747300	chr17:74736819-74747300	1	+	74737009	74745411	789624	8	298,42,67,53,66,57,77,1995,	0,5434,6309,6468,7488,8053,8188,8486,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	74736916	74747335	chr17:74736916-74747335	1	+	74737009	74745411	789624	9	201,111,42,67,53,66,57,77,2030,	0,3851,5337,6212,6371,7391,7956,8091,8389,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	74737216	74747300	chr17:74737216-74747300	1	+	74737272	74745411	789624	9	149,111,42,67,53,66,57,77,1995,	0,3551,5037,5912,6071,7091,7656,7791,8089,
#Partially deleted in new
chr17	74737218	74744465	chr17:74737218-74744465	0	+	74737218	74737218	8553170	6	147,111,42,67,53,158,	0,3549,5035,5910,6069,7089,
#Partially deleted in new
chr17	74737220	74744559	chr17:74737220-74744559	0	+	74737220	74737220	8553170	5	145,42,67,53,252,	0,5033,5908,6067,7087,
#Partially deleted in new
chr17	74737220	74745028	chr17:74737220-74745028	0	+	74737220	74737220	8553170	6	145,42,67,53,622,21,	0,5033,5908,6067,7087,7787,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	74737229	74747335	chr17:74737229-74747335	1	+	74737272	74745411	789624	8	136,42,67,53,66,57,77,2030,	0,5024,5899,6058,7078,7643,7778,8076,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	74737231	74747335	chr17:74737231-74747335	1	+	74737272	74745088	789624	8	134,111,42,67,53,66,57,2328,	0,3536,5022,5897,6056,7076,7641,7776,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	74737270	74747335	chr17:74737270-74747335	0	+	74737272	74745411	789624	10	95,111,42,67,53,66,57,77,185,901,	0,3497,4983,5858,6017,7037,7602,7737,8035,9164,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	74737270	74747334	chr17:74737270-74747334	1	+	74737272	74745411	789624	10	95,111,42,67,53,66,57,77,185,900,	0,3497,4983,5858,6017,7037,7602,7737,8035,9164,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	74744840	74747334	chr17:74744840-74747334	0	+	74744840	74744840	8553170	3	89,77,2029,	0,167,465,
#Deleted in new
chr17	74744857	74745794	chr17:74744857-74745794	0	+	74744857	74744857	8553170	2	72,489,	0,448,
#Partially deleted in new
chr17	74747318	74748912	chr17:74747318-74748912	3	-	74747318	74747318	8553170	2	225,340,	0,1254,
#Deleted in new
chr17	74748612	74748699	chr17:74748612-74748699	3	+	74748612	74748612	5263520	1	87,	0,
#Partially deleted in new
chr17	74748651	74769353	chr17:74748651-74769353	3	+	74748846	74768656	0	6	636,162,154,41,90,886,	0,13360,14715,18284,19495,19816,
#Partially deleted in new
chr17	74748651	74768582	chr17:74748651-74768582	0	+	74748846	74768582	789624	3	636,90,115,	0,19495,19816,
#Partially deleted in new
chr17	74762002	74769296	chr17:74762002-74769296	1	+	74762038	74768656	0	5	171,154,41,90,829,	0,1364,4933,6144,6465,
#Partially deleted in new
chr17	74763029	74768559	chr17:74763029-74768559	0	+	74763029	74763029	8553170	4	491,41,90,92,	0,3906,5117,5438,
#Partially deleted in new
chr17	74763427	74768803	chr17:74763427-74768803	0	+	74763427	74768160	789624	3	93,90,336,	0,4719,5040,
#Partially deleted in new
chr17	74770546	74776331	chr17:74770546-74776331	3	-	74771723	74775698	789624	7	1312,95,60,144,113,86,65,	0,1413,1671,2349,3029,5075,5720,
#Partially deleted in new
chr17	74770566	74776339	chr17:74770566-74776339	1	-	74771723	74775698	789624	7	1292,95,60,144,110,86,73,	0,1393,1651,2329,3009,5055,5700,
#Partially deleted in new
chr17	74770580	74776323	chr17:74770580-74776323	0	-	74770580	74770580	8553170	6	1278,318,144,110,86,57,	0,1379,2315,2995,5041,5686,
#Partially deleted in new
chr17	74771388	74776324	chr17:74771388-74776324	1	-	74771723	74775698	789624	7	470,80,60,144,113,86,58,	0,571,829,1507,2187,4233,4878,
#Partially deleted in new
chr17	74771557	74775707	chr17:74771557-74775707	1	-	74771723	74775698	789624	5	301,158,144,110,86,	0,402,1338,2018,4064,
#Deleted in new
chr17	74771624	74772469	chr17:74771624-74772469	0	-	74771624	74771624	8553170	2	234,510,	0,335,
#Partially deleted in new
chr17	74771659	74776323	chr17:74771659-74776323	1	-	74771723	74775713	789624	7	199,95,60,144,110,231,57,	0,300,558,1236,1916,3962,4607,
#Partially deleted in new
chr17	74771690	74776331	chr17:74771690-74776331	0	-	74772349	74775698	789624	7	168,436,94,144,110,86,65,	0,269,792,1205,1885,3931,4576,
#Partially deleted in new
chr17	74771694	74776298	chr17:74771694-74776298	1	-	74771723	74775713	789624	7	164,95,60,144,113,231,32,	0,265,523,1201,1881,3927,4572,
#Partially deleted in new
chr17	74771727	74776342	chr17:74771727-74776342	1	-	74771805	74775698	789624	6	107,60,144,110,86,76,	0,490,1168,1848,3894,4539,
#Partially deleted in new
chr17	74771763	74776365	chr17:74771763-74776365	1	-	74771805	74775698	789624	6	71,60,144,113,86,99,	0,454,1132,1812,3858,4503,
#Partially deleted in new
chr17	74771767	74776337	chr17:74771767-74776337	1	-	74771963	74775698	789624	7	91,18,60,144,113,86,71,	0,192,450,1128,1808,3854,4499,
#Partially deleted in new
chr17	74771793	74776331	chr17:74771793-74776331	0	-	74771793	74775698	789624	7	65,95,60,144,110,86,23,	0,166,424,1102,1782,3828,4515,
#Partially deleted in new
chr17	74772030	74776351	chr17:74772030-74776351	0	-	74772030	74772030	8553170	5	247,144,110,109,85,	0,865,1545,3568,4236,
#Partially deleted in new
chr17	74772174	74776337	chr17:74772174-74776337	0	-	74772174	74772174	8553170	4	221,144,113,71,	0,721,1401,4092,
#Partially deleted in new
chr17	74772237	74776304	chr17:74772237-74776304	0	-	74772237	74772237	8553170	6	40,144,113,190,86,38,	0,658,1338,1628,3384,4029,
#Partially deleted in new
chr17	74772265	74776345	chr17:74772265-74776345	0	-	74772265	74772265	8553170	4	130,144,110,79,	0,630,1310,4001,
#Deleted in new
chr17	74772271	74774099	chr17:74772271-74774099	0	-	74772271	74773672	789624	4	6,144,113,234,	0,624,1304,1594,
#Partially deleted in new
chr17	74772274	74776361	chr17:74772274-74776361	0	-	74772274	74772274	8553170	5	121,144,113,86,91,	0,621,1301,3347,3996,
#Partially deleted in new
chr17	74772294	74776367	chr17:74772294-74776367	0	-	74772294	74772294	8553170	5	101,144,113,86,101,	0,601,1281,3327,3972,
#Partially deleted in new
chr17	74772441	74776345	chr17:74772441-74776345	0	-	74772441	74772441	8553170	5	135,144,110,86,79,	0,454,1134,3180,3825,
#Partially deleted in new
chr17	74772672	74776323	chr17:74772672-74776323	0	-	74772672	74772672	8553170	5	367,110,74,86,57,	0,903,1193,2949,3594,
#Partially deleted in new
chr17	74772776	74776367	chr17:74772776-74776367	0	-	74772776	74772776	8553170	4	263,113,86,101,	0,799,2845,3490,
#Partially deleted in new
chr17	74772902	74776093	chr17:74772902-74776093	0	-	74772902	74775698	789624	4	137,113,86,58,	0,673,2719,3133,
#Partially deleted in new
chr17	74772993	74776351	chr17:74772993-74776351	0	-	74772993	74772993	8553170	3	692,86,85,	0,2628,3273,
#Partially deleted in new
chr17	74773310	74776367	chr17:74773310-74776367	0	-	74773310	74773310	8553170	3	378,86,101,	0,2311,2956,
#Partially deleted in new
chr17	74773353	74776345	chr17:74773353-74776345	0	-	74773353	74773353	8553170	4	332,63,86,79,	0,639,2268,2913,
#Partially deleted in new
chr17	74773608	74776128	chr17:74773608-74776128	0	-	74773608	74775713	789624	2	77,507,	0,2013,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	74775359	74776336	chr17:74775359-74776336	0	-	74775359	74775359	8553170	2	348,70,	0,907,
#Partially deleted in new
chr17	74776482	74839779	chr17:74776482-74839779	3	+	74777330	74836687	789624	10	95,112,122,82,97,81,100,109,94,3853,	0,781,8999,12306,13717,14473,18529,19041,43267,59444,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	74776498	74839752	chr17:74776498-74839752	1	+	74777330	74839101	789624	10	79,112,161,82,97,81,100,109,94,866,	0,765,1079,12290,13701,14457,18513,19025,43251,62388,
#Partially deleted in new
chr17	74776499	74795589	chr17:74776499-74795589	0	+	74777330	74795589	789624	6	78,112,97,81,100,66,	0,764,13700,14456,18512,19024,
#Partially deleted in new
chr17	74776499	74839751	chr17:74776499-74839751	1	+	74777330	74839101	789624	10	78,112,122,82,97,81,100,109,94,865,	0,764,8982,12289,13700,14456,18512,19024,43250,62387,
#Partially deleted in new
chr17	74776508	74785680	chr17:74776508-74785680	0	+	74776508	74776508	8553170	3	69,112,199,	0,755,8973,
#Partially deleted in new
chr17	74776519	74839753	chr17:74776519-74839753	1	+	74777330	74836687	789624	10	58,109,122,82,97,81,100,109,94,3827,	0,747,8962,12269,13680,14436,18492,19004,43230,59407,
#Deleted in new
chr17	74837098	74837908	chr17:74837098-74837908	0	+	74837098	74837098	8553170	2	255,319,	0,491,
#Partially deleted in new
chr17	74842022	74859875	chr17:74842022-74859875	3	-	74842434	74855092	789624	13	1531,233,188,161,230,126,154,166,212,115,599,414,132,	0,2253,4043,4737,5285,5829,7757,8183,8533,9554,9990,12671,17721,
#Partially deleted in new
chr17	74843363	74859872	chr17:74843363-74859872	0	-	74843363	74843363	8553170	9	190,233,188,778,126,154,166,4552,129,	0,912,2702,3396,4488,6416,6842,7192,16380,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	74844031	74860535	chr17:74844031-74860535	1	-	74844236	74855092	789624	12	477,188,161,230,126,154,166,212,115,599,414,87,	0,2034,2728,3276,3820,5748,6174,6524,7545,7981,10662,16417,
#Partially deleted in new
chr17	74852073	74861504	chr17:74852073-74861504	0	-	74852073	74852073	8553170	2	538,77,	0,9354,
#Partially deleted in new
chr17	74853516	74860841	chr17:74853516-74860841	0	-	74853516	74853516	8553170	2	1591,393,	0,6932,
#Partially deleted in new
chr17	74862496	74873023	chr17:74862496-74873023	3	-	74862816	74872944	789624	12	451,171,172,200,85,108,102,114,123,93,98,158,	0,579,1399,1651,1983,2327,3222,3634,3949,4287,9539,10369,
#Partially deleted in new
chr17	74862496	74873013	chr17:74862496-74873013	0	-	74866799	74872944	789624	10	451,171,200,108,102,114,99,96,72,148,	0,579,1651,2327,3222,3634,3949,4287,9539,10369,
#Partially deleted in new
chr17	74862497	74872974	chr17:74862497-74872974	1	-	74862816	74872944	789624	11	450,171,172,200,85,108,102,114,96,98,109,	0,578,1398,1650,1982,2326,3221,3633,4286,9538,10368,
#Partially deleted in new
chr17	74862497	74868753	chr17:74862497-74868753	1	-	74862816	74868565	789624	11	450,171,172,200,85,108,102,114,123,93,209,	0,578,1398,1650,1982,2326,3221,3633,3948,4286,6047,
#Partially deleted in new
chr17	74862498	74873006	chr17:74862498-74873006	0	-	74862498	74862498	8553170	12	449,171,172,200,85,108,102,114,123,96,98,764,	0,577,1397,1649,1981,2325,3220,3632,3947,4285,9537,9744,
#Partially deleted in new
chr17	74862500	74872976	chr17:74862500-74872976	0	-	74872803	74872944	789624	12	447,171,452,85,108,102,114,123,96,153,98,208,	0,575,1395,1979,2323,3218,3630,3945,4283,7449,9535,10268,
#Partially deleted in new
chr17	74862500	74872961	chr17:74862500-74872961	1	-	74862816	74872944	789624	12	447,171,172,200,85,126,102,114,123,93,98,96,	0,575,1395,1647,1979,2323,3218,3630,3945,4283,9535,10365,
#Partially deleted in new
chr17	74862504	74872968	chr17:74862504-74872968	0	-	74872803	74872944	789624	12	443,171,172,200,85,108,102,114,123,96,98,200,	0,571,1391,1643,1975,2319,3214,3626,3941,4279,9531,10264,
#Partially deleted in new
chr17	74862517	74873015	chr17:74862517-74873015	1	-	74862816	74872944	789624	11	430,171,172,198,108,102,114,123,96,98,150,	0,558,1378,1630,2306,3201,3613,3928,4266,9518,10348,
#Partially deleted in new
chr17	74862541	74873031	chr17:74862541-74873031	1	-	74862816	74872944	789624	12	406,171,172,200,85,108,102,114,123,222,98,166,	0,534,1354,1606,1938,2282,3177,3589,3904,4242,9494,10324,
#Partially deleted in new
chr17	74862543	74872985	chr17:74862543-74872985	1	-	74862816	74872944	789624	12	404,171,172,200,85,108,102,114,99,93,98,120,	0,532,1352,1604,1936,2280,3175,3587,3902,4240,9492,10322,
#Partially deleted in new
chr17	74862608	74872976	chr17:74862608-74872976	1	-	74862816	74872944	789624	13	339,171,172,200,85,108,102,114,123,93,72,119,111,	0,467,1287,1539,1871,2215,3110,3522,3837,4175,9427,9589,10257,
#Partially deleted in new
chr17	74864275	74872942	chr17:74864275-74872942	0	-	74872803	74872942	789624	8	72,85,108,102,114,93,98,174,	0,204,548,1443,1855,2508,7760,8493,
#Partially deleted in new
chr17	74864895	74868631	chr17:74864895-74868631	0	-	74864895	74868565	789624	6	36,102,114,123,96,87,	0,823,1235,1550,1888,3649,
#Partially deleted in new
chr17	74866130	74872968	chr17:74866130-74872968	0	-	74866799	74872944	789624	5	114,123,115,98,103,	0,315,653,5905,6735,
#Partially deleted in new
chr17	74866136	74868473	chr17:74866136-74868473	0	-	74866136	74866136	8553170	4	108,123,93,244,	0,309,647,2093,
#Partially deleted in new
chr17	74866180	74872974	chr17:74866180-74872974	0	-	74872803	74872944	789624	5	64,123,93,72,206,	0,265,603,5855,6588,
#Partially deleted in new
chr17	74866208	74872977	chr17:74866208-74872977	0	-	74866208	74872944	789624	5	36,99,222,98,112,	0,237,575,5827,6657,
#Partially deleted in new
chr17	74866511	74872974	chr17:74866511-74872974	0	-	74866511	74866511	8553170	3	365,98,109,	0,5524,6354,
#Deleted in new
chr17	74872377	74872974	chr17:74872377-74872974	0	-	74872377	74872377	8553170	2	309,220,	0,377,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	74877298	74893610	chr17:74877298-74893610	3	-	74878330	74893595	789624	6	1179,180,188,181,167,259,	0,2105,3769,5231,15224,16053,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	74877351	74893607	chr17:74877351-74893607	1	-	74878330	74893595	789624	7	1126,180,188,181,167,175,27,	0,2052,3716,5178,15171,16000,16229,
#Partially deleted in new
chr17	74877917	74882884	chr17:74877917-74882884	0	-	74877917	74877917	8553170	3	560,180,355,	0,1486,4612,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	74879041	74882704	chr17:74879041-74882704	0	-	74879286	74882704	789624	3	542,188,175,	0,2026,3488,
#Partially deleted in new
chr17	74882585	74893781	chr17:74882585-74893781	0	-	74882585	74893595	789624	2	125,430,	0,10766,
#Partially deleted in new
chr17	74916083	74923256	chr17:74916083-74923256	3	-	74918072	74923073	0	3	1993,1218,347,	0,3370,6826,
#Partially deleted in new
chr17	74917915	74923256	chr17:74917915-74923256	0	-	74920434	74923073	789624	3	161,1165,347,	0,1538,4994,
#Partially deleted in new
chr17	74924274	74933911	chr17:74924274-74933911	3	+	74924632	74933545	789624	7	59,346,137,59,134,875,537,	0,325,1281,2948,3390,6004,9100,
#Partially deleted in new
chr17	74924274	74928045	chr17:74924274-74928045	0	+	74924274	74924274	8553170	4	59,346,137,823,	0,325,1281,2948,
#Partially deleted in new
chr17	74924602	74933912	chr17:74924602-74933912	1	+	74924632	74933545	789624	6	343,137,59,134,875,538,	0,953,2620,3062,5676,8772,
#Partially deleted in new
chr17	74935718	74949992	chr17:74935718-74949992	1	+	74935921	74949416	789624	7	222,417,137,59,119,815,747,	0,5674,6182,7567,7887,10942,13527,
#Partially deleted in new
chr17	74935801	74949416	chr17:74935801-74949416	3	+	74935801	74949416	789624	7	106,384,137,59,119,815,171,	0,5624,6099,7484,7804,10859,13444,
#Partially deleted in new
chr17	74950742	74954972	chr17:74950742-74954972	0	-	74950742	74950742	8553170	6	891,159,92,81,107,835,	0,1162,1526,2263,2802,3395,
#Partially deleted in new
chr17	74950743	74972734	chr17:74950743-74972734	3	-	74951569	74972656	789624	19	890,159,92,81,107,228,165,79,152,91,141,57,223,117,107,117,171,150,144,	0,1161,1525,2262,2801,3394,5048,7397,7583,7929,8167,9137,9282,11129,11490,12221,12996,13739,21847,
#Partially deleted in new
chr17	74951455	74972720	chr17:74951455-74972720	0	-	74962237	74972656	789624	19	178,159,92,81,107,228,165,79,152,91,141,57,223,117,107,117,140,150,130,	0,449,813,1550,2089,2682,4336,6685,6871,7217,7455,8425,8570,10417,10778,11509,12315,13027,21135,
#Partially deleted in new
chr17	74954325	74955956	chr17:74954325-74955956	0	-	74954325	74954325	8553170	2	112,165,	0,1466,
#Partially deleted in new
chr17	74955820	74959915	chr17:74955820-74959915	0	-	74955820	74955820	8553170	5	136,79,437,141,35,	0,2320,2506,3090,4060,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	74957968	74960095	chr17:74957968-74960095	0	-	74957982	74960095	789624	6	251,152,91,141,57,70,	0,358,704,942,1912,2057,
#Deleted in new
chr17	74958202	74959001	chr17:74958202-74959001	0	-	74958202	74958202	8553170	3	17,465,91,	0,124,708,
#Partially deleted in new
chr17	74958975	74972716	chr17:74958975-74972716	0	-	74958975	74972656	789624	7	76,57,223,117,107,114,126,	0,905,1050,2897,3258,3989,13615,
#Partially deleted in new
chr17	74961596	74972763	chr17:74961596-74972763	0	-	74961596	74961596	8553170	4	393,107,1668,173,	0,637,1368,10994,
#Partially deleted in new
chr17	74962287	74973166	chr17:74962287-74973166	0	-	74962287	74962287	8553170	5	53,117,171,150,128,	0,677,1452,2195,10751,
#Partially deleted in new
chr17	74962972	74972771	chr17:74962972-74972771	0	-	74962972	74972656	789624	3	106,171,181,	0,767,9618,
#Partially deleted in new
chr17	74962986	74972961	chr17:74962986-74972961	0	-	74962986	74962986	8553170	4	95,171,150,124,	0,753,1496,9851,
#Partially deleted in new
chr17	74963507	74972732	chr17:74963507-74972732	0	-	74963507	74963507	8553170	3	403,150,142,	0,975,9083,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	74963770	74972730	chr17:74963770-74972730	0	-	74963770	74963770	8553170	4	140,150,128,140,	0,712,4035,8820,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	74970703	74975728	chr17:74970703-74975728	3	+	74970703	74970703	789624	3	89,163,563,	0,3864,4462,
#Partially deleted in new
chr17	74987631	75005800	chr17:74987631-75005800	3	+	74988043	75004074	789624	5	491,113,149,165,2618,	0,11872,13709,14432,15551,
#Partially deleted in new
chr17	75012669	75020939	chr17:75012669-75020939	0	+	75012686	75020939	789624	6	203,37,60,83,191,19,	0,4408,7030,7643,7797,8251,
#Partially deleted in new
chr17	75012673	75021261	chr17:75012673-75021261	3	+	75012686	75021005	0	6	199,37,60,83,170,341,	0,4404,7026,7639,7814,8247,
#Partially deleted in new
chr17	75012736	75020575	chr17:75012736-75020575	0	+	75012736	75018626	789624	6	136,37,109,60,83,88,	0,4341,5849,6963,7576,7751,
#Deleted in new
chr17	75020228	75021261	chr17:75020228-75021261	0	+	75020228	75020228	8553170	3	167,170,341,	0,259,692,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	75031096	75031186	chr17:75031096-75031186	3	+	75031096	75031096	8553170	1	90,	0,
#Partially deleted in new
chr17	75032574	75049284	chr17:75032574-75049284	0	+	75032574	75032574	8553170	5	79,169,85,126,65,	0,356,1458,2657,16645,
#Partially deleted in new
chr17	75032579	75049259	chr17:75032579-75049259	0	+	75032579	75032579	8553170	5	145,169,85,126,40,	0,351,1453,2652,16640,
#Partially deleted in new
chr17	75032599	75049323	chr17:75032599-75049323	0	+	75032599	75032599	8553170	4	500,85,126,104,	0,1433,2632,16620,
#Partially deleted in new
chr17	75032609	75040463	chr17:75032609-75040463	0	+	75032609	75032609	8553170	4	115,85,126,340,	0,1423,2622,7514,
#Partially deleted in new
chr17	75032611	75063263	chr17:75032611-75063263	1	+	75059566	75063047	789624	8	113,85,126,109,92,96,126,246,	0,1421,2620,16608,20402,26898,29508,30406,
#Partially deleted in new
chr17	75038862	75046963	chr17:75038862-75046963	3	-	75038931	75042650	789624	6	201,63,72,97,131,39,	0,346,1229,3318,3666,8062,
#Partially deleted in new
chr17	75038862	75046985	chr17:75038862-75046985	1	-	75038931	75042650	789624	5	201,63,97,131,61,	0,346,3318,3666,8062,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	75038862	75041198	chr17:75038862-75041198	0	-	75038862	75038862	8553170	2	201,1990,	0,346,
#Partially deleted in new
chr17	75039017	75046950	chr17:75039017-75046950	0	-	75040014	75042650	789624	6	46,63,170,97,131,26,	0,191,854,3163,3511,7907,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	75041431	75042661	chr17:75041431-75042661	0	-	75041431	75041431	8553170	2	846,133,	0,1097,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	75041739	75042015	chr17:75041739-75042015	3	+	75041739	75041739	8553170	1	276,	0,
#Partially deleted in new
chr17	75047183	75065889	chr17:75047183-75065889	0	+	75047250	75049224	789624	7	116,171,109,92,96,126,2872,	0,235,2036,5830,12326,14936,15834,
#Partially deleted in new
chr17	75047244	75065884	chr17:75047244-75065884	3	+	75047250	75063047	789624	6	345,109,92,96,126,2867,	0,1975,5769,12265,14875,15773,
#Partially deleted in new
chr17	75048842	75063095	chr17:75048842-75063095	0	+	75048842	75048842	8553170	6	115,109,92,96,126,78,	0,377,4171,10667,13277,14175,
#Partially deleted in new
chr17	75059122	75063358	chr17:75059122-75063358	0	+	75059122	75059122	8553170	3	483,126,341,	0,2997,3895,
#Deleted in new
chr17	75060490	75060620	chr17:75060490-75060620	7	-	75060490	75060490	16724991	1	130,	0,
#Partially deleted in new
chr17	75074305	75079549	chr17:75074305-75079549	7	+	75074305	75074305	16724991	4	99,239,156,2354,	0,292,2133,2890,
#Partially deleted in new
chr17	75087726	75106162	chr17:75087726-75106162	3	+	75093636	75106033	789624	7	170,154,247,144,810,211,283,	0,1424,5862,10311,12280,16243,18153,
#Partially deleted in new
chr17	75087733	75093796	chr17:75087733-75093796	0	+	75093636	75093796	789624	3	163,191,208,	0,1380,5855,
#Partially deleted in new
chr17	75087940	75100009	chr17:75087940-75100009	0	+	75087940	75087940	8553170	5	104,154,247,144,53,	0,1210,5648,10097,12016,
#Partially deleted in new
chr17	75087959	75106162	chr17:75087959-75106162	1	+	75093636	75106033	789624	7	85,154,247,144,810,211,283,	0,1191,5629,10078,12047,16010,17920,
#Partially deleted in new
chr17	75087959	75104180	chr17:75087959-75104180	0	+	75093636	75104180	789624	6	85,191,247,144,810,211,	0,1154,5629,10078,12047,16010,
#Partially deleted in new
chr17	75087964	75100039	chr17:75087964-75100039	0	+	75087964	75087964	8553170	4	80,247,144,83,	0,5624,10073,11992,
#Partially deleted in new
chr17	75088937	75106151	chr17:75088937-75106151	1	+	75093636	75106033	789624	6	367,247,144,810,211,272,	0,4651,9100,11069,15032,16942,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	75089861	75089974	chr17:75089861-75089974	3	-	75089861	75089861	8553170	1	113,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	75090161	75100182	chr17:75090161-75100182	0	+	75090290	75100182	789624	4	171,247,144,176,	0,3427,7876,9845,
#Partially deleted in new
chr17	75093286	75104410	chr17:75093286-75104410	1	+	75093414	75104199	789624	5	200,247,144,810,441,	0,302,4751,6720,10683,
#Partially deleted in new
chr17	75093355	75100371	chr17:75093355-75100371	0	+	75093636	75100371	789624	3	480,144,365,	0,4682,6651,
#Partially deleted in new
chr17	75109951	75129170	chr17:75109951-75129170	1	+	75110288	75128817	789624	3	428,80,494,	0,511,18725,
#Partially deleted in new
chr17	75109977	75114826	chr17:75109977-75114826	1	+	75110288	75114182	789624	3	402,144,658,	0,485,4191,
#Partially deleted in new
chr17	75109986	75130265	chr17:75109986-75130265	3	+	75110288	75129038	789624	3	393,144,1589,	0,476,18690,
#Partially deleted in new
chr17	75110180	75114830	chr17:75110180-75114830	1	+	75110288	75114799	789624	3	199,144,102,	0,282,4548,
#Partially deleted in new
chr17	75114290	75129451	chr17:75114290-75129451	0	+	75114290	75114290	8553170	2	347,775,	0,14386,
#Deleted in new
chr17	75130224	75131446	chr17:75130224-75131446	1	-	75130487	75131197	789624	4	418,115,61,266,	0,528,820,956,
#Deleted in new
chr17	75130227	75131795	chr17:75130227-75131795	3	-	75130487	75131707	0	5	415,115,61,101,262,	0,525,817,953,1306,
#Deleted in new
chr17	75130227	75131743	chr17:75130227-75131743	0	-	75131002	75131707	0	5	415,115,117,101,210,	0,525,737,953,1306,
#Deleted in new
chr17	75130227	75131749	chr17:75130227-75131749	0	-	75130227	75130227	8553170	3	415,115,785,	0,525,737,
#Deleted in new
chr17	75130229	75131683	chr17:75130229-75131683	0	-	75130487	75131683	789624	4	408,61,101,150,	0,815,951,1304,
#Deleted in new
chr17	75130270	75131473	chr17:75130270-75131473	0	-	75131002	75131197	789624	4	372,115,141,293,	0,482,694,910,
#Deleted in new
chr17	75130331	75131258	chr17:75130331-75131258	0	-	75130519	75131258	789624	3	311,61,78,	0,713,849,
#Deleted in new
chr17	75130362	75131425	chr17:75130362-75131425	0	-	75130362	75130362	8553170	3	280,115,381,	0,390,682,
#Deleted in new
chr17	75130435	75131048	chr17:75130435-75131048	0	-	75130435	75130435	8553170	2	207,296,	0,317,
#Deleted in new
chr17	75130472	75131744	chr17:75130472-75131744	1	-	75130539	75131707	789624	5	165,115,61,101,211,	0,280,572,708,1061,
#Deleted in new
chr17	75130545	75131730	chr17:75130545-75131730	0	-	75130545	75130545	8553170	4	97,115,317,197,	0,207,419,988,
#Deleted in new
chr17	75130567	75131321	chr17:75130567-75131321	1	-	75131002	75131197	789624	3	300,141,141,	0,397,613,
#Deleted in new
chr17	75130570	75131757	chr17:75130570-75131757	0	-	75130570	75130570	8553170	4	72,115,237,224,	0,182,474,963,
#Deleted in new
chr17	75130787	75131714	chr17:75130787-75131714	0	-	75130787	75130787	8553170	4	80,141,101,181,	0,177,393,746,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	75130882	75133043	chr17:75130882-75133043	3	+	75130882	75130882	8553170	1	2161,	0,
#Partially deleted in new
chr17	75135247	75154683	chr17:75135247-75154683	3	-	75136101	75154397	789624	5	1003,19,98,143,342,	0,11418,12308,13281,19094,
#Partially deleted in new
chr17	75135247	75154243	chr17:75135247-75154243	1	-	75136101	75148589	789624	5	1003,19,98,143,1026,	0,11418,12308,13281,17970,
#Partially deleted in new
chr17	75135285	75153293	chr17:75135285-75153293	1	-	75136101	75148589	789624	5	965,19,98,143,389,	0,11380,12270,13243,17619,
#Partially deleted in new
chr17	75135306	75154675	chr17:75135306-75154675	1	-	75136001	75154397	789624	4	944,98,143,334,	0,12249,13222,19035,
#Partially deleted in new
chr17	75135885	75153866	chr17:75135885-75153866	1	-	75136101	75148589	789624	5	365,19,98,143,38,	0,10780,11670,12643,17943,
#Partially deleted in new
chr17	75135983	75146780	chr17:75135983-75146780	0	-	75135983	75135983	8553170	2	267,115,	0,10682,
#Partially deleted in new
chr17	75135991	75153826	chr17:75135991-75153826	1	-	75136101	75148589	789624	5	259,19,98,143,57,	0,10674,11564,12537,17778,
#Partially deleted in new
chr17	75136147	75168281	chr17:75136147-75168281	0	-	75136147	75148589	789624	5	103,19,98,143,48,	0,10518,11408,12381,32086,
#Partially deleted in new
chr17	75136200	75154512	chr17:75136200-75154512	1	-	75147537	75154397	789624	5	50,19,134,143,171,	0,10465,11319,12328,18141,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	75145260	75146546	chr17:75145260-75146546	3	-	75145260	75145260	8553170	2	622,95,	0,1191,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	75145669	75145762	chr17:75145669-75145762	3	+	75145669	75145669	8553170	1	93,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	75165585	75182983	chr17:75165585-75182983	3	-	75168338	75182834	0	4	2816,72,132,170,	0,9166,15471,17228,
#Partially deleted in new
chr17	75167867	75182956	chr17:75167867-75182956	1	-	75168338	75182834	0	3	534,132,143,	0,13189,14946,
#Partially deleted in new
chr17	75168297	75182563	chr17:75168297-75182563	1	-	75168338	75181080	789624	4	104,72,132,182,	0,6454,12759,14084,
#Partially deleted in new
chr17	75205658	75215775	chr17:75205658-75215775	0	+	75208559	75215775	789624	6	136,117,163,71,44,22,	0,2845,4164,6333,7417,10095,
#Partially deleted in new
chr17	75205689	75226058	chr17:75205689-75226058	0	+	75205689	75205689	8553170	11	105,94,163,71,44,70,122,135,123,132,138,	0,2837,4133,6302,7386,10064,12495,19413,19652,20008,20231,
#Partially deleted in new
chr17	75205690	75235758	chr17:75205690-75235758	3	+	75205761	75235679	0	19	104,94,163,71,44,70,122,135,123,132,107,84,66,152,118,101,152,102,181,	0,2836,4132,6301,7385,10063,12494,19412,19651,20007,20360,25649,25882,26137,27160,27367,28946,29409,29887,
#Partially deleted in new
chr17	75205706	75235757	chr17:75205706-75235757	1	+	75212037	75235679	789624	18	88,163,71,44,70,122,135,123,132,107,84,66,152,118,101,152,102,180,	0,4116,6285,7369,10047,12478,19396,19635,19991,20344,25633,25866,26121,27144,27351,28930,29393,29871,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	75205706	75208620	chr17:75205706-75208620	0	+	75205706	75205706	8553170	3	88,271,94,	0,2448,2820,
#Partially deleted in new
chr17	75205708	75226978	chr17:75205708-75226978	0	+	75205708	75205708	8553170	11	86,163,71,44,70,122,135,123,132,107,234,	0,4114,6283,7367,10045,12476,19394,19633,19989,20342,21036,
#Partially deleted in new
chr17	75205719	75235691	chr17:75205719-75235691	1	+	75205761	75235679	789624	18	75,94,163,71,44,70,122,123,132,107,84,66,152,118,101,152,102,114,	0,2807,4103,6272,7356,10034,12465,19622,19978,20331,25620,25853,26108,27131,27338,28917,29380,29858,
#Partially deleted in new
chr17	75205719	75235710	chr17:75205719-75235710	0	+	75205761	75225137	789624	17	75,94,163,71,44,70,135,123,132,107,84,66,152,118,101,565,133,	0,2807,4103,6272,7356,10034,19383,19622,19978,20331,25620,25853,26108,27131,27338,28917,29858,
#Partially deleted in new
chr17	75215800	75232954	chr17:75215800-75232954	0	+	75215800	75226079	789624	8	23,122,132,102,84,66,289,104,	0,2384,9897,10255,15539,15772,16027,17050,
#Partially deleted in new
chr17	75218207	75226157	chr17:75218207-75226157	0	+	75218207	75226157	789624	5	99,114,123,132,107,	0,6916,7134,7490,7843,
#Partially deleted in new
chr17	75218292	75225949	chr17:75218292-75225949	0	+	75218292	75218292	8553170	4	14,135,123,252,	0,6810,7049,7405,
#Partially deleted in new
chr17	75225102	75232952	chr17:75225102-75232952	0	+	75225102	75232952	789624	7	135,123,132,107,66,152,102,	0,239,595,948,6470,6725,7748,
#Partially deleted in new
chr17	75225367	75231977	chr17:75225367-75231977	0	+	75225367	75225367	8553170	5	462,107,84,66,150,	0,683,5972,6205,6460,
#Partially deleted in new
chr17	75225390	75235152	chr17:75225390-75235152	0	+	75225390	75235152	789624	9	74,107,84,66,152,118,101,152,53,	0,660,5949,6182,6437,7460,7667,9246,9709,
#Partially deleted in new
chr17	75226107	75232947	chr17:75226107-75232947	0	+	75226107	75229007	789624	6	50,134,84,66,152,97,	0,2890,5232,5465,5720,6743,
#Deleted in new
chr17	75227947	75229126	chr17:75227947-75229126	0	+	75227947	75227947	8553170	2	437,129,	0,1050,
#Partially deleted in new
chr17	75228160	75235757	chr17:75228160-75235757	1	+	75231585	75235679	789624	9	971,84,66,152,118,101,152,102,180,	0,3179,3412,3667,4690,4897,6476,6939,7417,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	75231137	75232941	chr17:75231137-75232941	0	+	75231137	75231137	8553170	4	286,66,152,91,	0,435,690,1713,
#Partially deleted in new
chr17	75232919	75234782	chr17:75232919-75234782	0	+	75232919	75232919	8553170	2	239,146,	0,1717,
#Partially deleted in new
chr17	75233124	75235758	chr17:75233124-75235758	0	+	75233124	75235478	789624	5	34,152,102,59,181,	0,1512,1975,2297,2453,
#Deleted in new
chr17	75234666	75235757	chr17:75234666-75235757	0	+	75234666	75235133	789624	3	122,86,180,	0,449,911,
#Deleted in new
chr17	75234703	75235757	chr17:75234703-75235757	0	+	75234703	75235679	789624	3	91,102,180,	0,396,874,
#Deleted in new
chr17	75234752	75235752	chr17:75234752-75235752	0	+	75234752	75235133	789624	3	36,89,175,	0,360,825,
#Partially deleted in new
chr17	75236598	75261804	chr17:75236598-75261804	3	-	75238278	75261587	0	17	1791,111,170,197,320,71,246,117,82,138,81,104,124,99,76,85,257,	0,2053,2315,2776,3190,3743,4213,4801,5016,5737,6232,6464,6848,8020,9910,10113,24949,
#Partially deleted in new
chr17	75236598	75261600	chr17:75236598-75261600	1	-	75238278	75261587	0	16	1791,111,170,197,320,71,246,117,82,138,81,104,124,76,85,53,	0,2053,2315,2776,3190,3743,4213,4801,5016,5737,6232,6464,6848,9910,10113,24949,
#Partially deleted in new
chr17	75236598	75261621	chr17:75236598-75261621	0	-	75242873	75261587	789624	15	1791,111,170,197,320,716,117,82,138,81,124,99,76,85,74,	0,2053,2315,2776,3190,3743,4801,5016,5737,6232,6848,8020,9910,10113,24949,
#Partially deleted in new
chr17	75236598	75261600	chr17:75236598-75261600	0	-	75246795	75261587	789624	18	1791,111,170,197,320,71,246,117,82,138,81,104,124,99,76,85,169,53,	0,2053,2315,2776,3190,3743,4213,4801,5016,5737,6232,6464,6848,8020,9910,10113,12241,24949,
#Deleted in new
chr17	75236599	75240450	chr17:75236599-75240450	0	-	75236599	75236599	8553170	3	1790,111,1537,	0,2052,2314,
#Partially deleted in new
chr17	75236601	75261623	chr17:75236601-75261623	0	-	75236601	75236601	8553170	14	1788,111,170,197,1269,117,859,81,104,124,99,76,85,76,	0,2050,2312,2773,3187,4798,5013,6229,6461,6845,8017,9907,10110,24946,
#Partially deleted in new
chr17	75236620	75261631	chr17:75236620-75261631	0	-	75238278	75261587	8553170	18	1157,408,111,170,197,320,71,246,117,82,138,81,104,124,99,76,85,84,	0,1361,2031,2293,2754,3168,3721,4191,4779,4994,5715,6210,6442,6826,7998,9888,10091,24927,
#Partially deleted in new
chr17	75237283	75262361	chr17:75237283-75262361	1	-	75237448	75243504	0	16	249,111,170,197,320,71,246,117,82,138,81,104,124,76,85,80,	0,1368,1630,2091,2505,3058,3528,4116,4331,5052,5547,5779,6163,9225,9428,24998,
#Partially deleted in new
chr17	75237426	75262361	chr17:75237426-75262361	1	-	75237590	75244702	789624	17	218,111,170,197,320,71,246,117,82,138,81,104,124,99,76,85,80,	0,1225,1487,1948,2362,2915,3385,3973,4188,4909,5404,5636,6020,7192,9082,9285,24855,
#Deleted in new
chr17	75237521	75239538	chr17:75237521-75239538	0	-	75238060	75239538	789624	5	275,109,111,170,164,	0,460,1130,1392,1853,
#Deleted in new
chr17	75237525	75239081	chr17:75237525-75239081	0	-	75237742	75239081	789624	3	271,111,168,	0,1126,1388,
#Deleted in new
chr17	75238178	75239545	chr17:75238178-75239545	0	-	75238995	75239545	789624	4	211,111,105,171,	0,473,735,1196,
#Partially deleted in new
chr17	75238237	75262363	chr17:75238237-75262363	1	-	75238278	75244702	0	17	152,111,170,197,320,71,246,117,82,138,81,104,124,99,76,85,82,	0,414,676,1137,1551,2104,2574,3162,3377,4098,4593,4825,5209,6381,8271,8474,24044,
#Deleted in new
chr17	75238245	75239551	chr17:75238245-75239551	0	-	75238709	75239551	789624	3	144,111,177,	0,406,1129,
#Deleted in new
chr17	75238356	75238985	chr17:75238356-75238985	0	-	75238356	75238356	8553170	2	406,72,	0,557,
#Deleted in new
chr17	75238964	75240437	chr17:75238964-75240437	0	-	75238964	75238964	8553170	3	115,320,96,	0,824,1377,
#Deleted in new
chr17	75240793	75241733	chr17:75240793-75241733	0	-	75240793	75240793	8553170	2	264,334,	0,606,
#Deleted in new
chr17	75240948	75242368	chr17:75240948-75242368	0	-	75240948	75240948	8553170	3	109,297,33,	0,451,1387,
#Partially deleted in new
chr17	75241668	75261593	chr17:75241668-75261593	0	-	75241668	75243504	789624	6	28,138,81,104,124,46,	0,667,1162,1394,1778,19879,
#Partially deleted in new
chr17	75241864	75261590	chr17:75241864-75261590	0	-	75241864	75241864	8553170	6	609,81,124,76,85,43,	0,966,1582,4644,4847,19683,
#Partially deleted in new
chr17	75242883	75261585	chr17:75242883-75261585	0	-	75243223	75261585	789624	7	28,196,124,99,76,85,38,	0,179,563,1735,3625,3828,18664,
#Partially deleted in new
chr17	75242888	75261617	chr17:75242888-75261617	0	-	75246795	75261587	789624	6	23,124,76,85,169,70,	0,558,3620,3823,5951,18659,
#Partially deleted in new
chr17	75243134	75261593	chr17:75243134-75261593	0	-	75244469	75261587	789624	7	32,124,89,99,76,85,46,	0,312,1267,1484,3374,3577,18413,
#Partially deleted in new
chr17	75243516	75262358	chr17:75243516-75262358	0	-	75243516	75244702	789624	6	54,99,76,85,169,77,	0,1102,2992,3195,5323,18765,
#Partially deleted in new
chr17	75261673	75266373	chr17:75261673-75266373	3	+	75261900	75265923	0	5	310,192,64,168,672,	0,823,1130,1666,4028,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	75261673	75264490	chr17:75261673-75264490	1	+	75261900	75263552	789624	4	310,192,64,1151,	0,823,1130,1666,
#Partially deleted in new
chr17	75261911	75266330	chr17:75261911-75266330	1	+	75262326	75265923	789624	4	777,64,168,629,	0,892,1428,3790,
#Partially deleted in new
chr17	75261960	75266084	chr17:75261960-75266084	0	+	75261960	75262526	789624	5	23,226,64,168,383,	0,502,843,1379,3741,
#Deleted in new
chr17	75262608	75263289	chr17:75262608-75263289	0	+	75262608	75262608	8553170	2	80,486,	0,195,
#Partially deleted in new
chr17	75262625	75266363	chr17:75262625-75266363	0	+	75262625	75265923	789624	5	63,64,168,265,171,	0,178,714,3076,3567,
#Partially deleted in new
chr17	75262672	75266373	chr17:75262672-75266373	0	+	75262672	75265923	789624	5	16,64,168,263,181,	0,131,667,3029,3520,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	75266227	75271218	chr17:75266227-75271218	3	-	75266739	75270195	789624	6	740,93,156,110,132,75,	0,1310,1518,1855,3886,4916,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	75266231	75270248	chr17:75266231-75270248	1	-	75266739	75270195	789624	5	736,93,156,110,135,	0,1306,1514,1851,3882,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	75266232	75271173	chr17:75266232-75271173	1	-	75266739	75270195	789624	7	735,93,156,110,102,132,30,	0,1305,1513,1850,3114,3881,4911,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	75266246	75271227	chr17:75266246-75271227	1	-	75266739	75270195	789624	7	721,93,156,110,123,132,84,	0,1291,1499,1836,3100,3867,4897,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	75266263	75271155	chr17:75266263-75271155	1	-	75266739	75270195	789624	7	704,93,156,110,123,132,213,	0,1274,1482,1819,3083,3850,4679,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	75266434	75271227	chr17:75266434-75271227	1	-	75266739	75270195	789624	5	533,93,110,132,84,	0,1103,1648,3679,4709,
#Partially deleted in new
chr17	75266511	75271211	chr17:75266511-75271211	1	-	75267267	75270195	8553170	6	1119,156,110,123,132,68,	0,1234,1571,2835,3602,4632,
#Partially deleted in new
chr17	75266671	75270227	chr17:75266671-75270227	1	-	75266739	75270195	789624	5	296,180,156,110,114,	0,779,1074,1411,3442,
#Partially deleted in new
chr17	75266680	75271200	chr17:75266680-75271200	1	-	75267586	75270195	789624	4	287,93,132,57,	0,857,3433,4463,
#Partially deleted in new
chr17	75266794	75271133	chr17:75266794-75271133	0	-	75266794	75270195	789624	6	173,93,156,110,132,191,	0,743,951,1288,3319,4148,
#Partially deleted in new
chr17	75266932	75271170	chr17:75266932-75271170	0	-	75266932	75270195	789624	6	35,180,110,102,132,27,	0,518,1150,2414,3181,4211,
#Partially deleted in new
chr17	75267589	75270245	chr17:75267589-75270245	0	-	75267589	75267589	8553170	4	41,447,123,132,	0,156,1757,2524,
#Partially deleted in new
chr17	75267750	75270619	chr17:75267750-75270619	0	-	75267750	75270195	789624	4	151,110,123,506,	0,332,1596,2363,
#Partially deleted in new
chr17	75267823	75270621	chr17:75267823-75270621	0	-	75267823	75270195	789624	3	78,110,508,	0,259,2290,
#Partially deleted in new
chr17	75267937	75270177	chr17:75267937-75270177	0	-	75267937	75267937	8553170	2	255,64,	0,2176,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	75271368	75273895	chr17:75271368-75273895	3	+	75271368	75271368	789624	1	2527,	0,
#Deleted in new
chr17	75271397	75273722	chr17:75271397-75273722	1	+	75271397	75271397	8553170	2	235,311,	0,2014,
#Partially deleted in new
chr17	75272980	75289449	chr17:75272980-75289449	1	-	75273450	75286764	789624	7	659,131,184,156,170,90,96,	0,4372,5171,13323,13652,15521,16373,
#Partially deleted in new
chr17	75272991	75289390	chr17:75272991-75289390	1	-	75273450	75286764	789624	8	648,131,184,171,156,170,90,37,	0,4361,5160,10431,13312,13641,15510,16362,
#Partially deleted in new
chr17	75272991	75286723	chr17:75272991-75286723	0	-	75273237	75286723	789624	3	297,60,91,	0,13408,13641,
#Partially deleted in new
chr17	75272992	75289433	chr17:75272992-75289433	3	-	75273450	75286764	789624	9	647,131,184,171,156,170,74,38,80,	0,4360,5159,10430,13311,13640,15395,15561,16361,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	75272992	75287674	chr17:75272992-75287674	1	-	75273450	75286764	789624	6	647,131,184,171,156,1042,	0,4360,5159,10430,13311,13640,
#Partially deleted in new
chr17	75272992	75289390	chr17:75272992-75289390	1	-	75273450	75286764	789624	7	647,131,184,171,156,170,37,	0,4360,5159,10430,13311,13640,16361,
#Partially deleted in new
chr17	75273029	75289411	chr17:75273029-75289411	1	-	75273450	75286764	789624	8	610,131,184,171,156,170,74,58,	0,4323,5122,10393,13274,13603,15358,16324,
#Partially deleted in new
chr17	75273550	75289386	chr17:75273550-75289386	0	-	75273550	75286764	789624	6	89,171,156,170,74,33,	0,9872,12753,13082,14837,15803,
#Partially deleted in new
chr17	75278237	75289510	chr17:75278237-75289510	0	-	75278237	75283578	789624	4	98,171,156,157,	0,5185,8066,11116,
#Partially deleted in new
chr17	75283422	75289372	chr17:75283422-75289372	0	-	75283422	75286764	789624	5	171,156,170,74,284,	0,2881,3210,4965,5666,
#Partially deleted in new
chr17	75283428	75289406	chr17:75283428-75289406	0	-	75283428	75286764	789624	5	165,156,170,204,53,	0,2875,3204,4959,5925,
#Partially deleted in new
chr17	75283564	75289360	chr17:75283564-75289360	0	-	75283564	75286764	789624	5	29,156,170,90,272,	0,2739,3068,4937,5524,
#Partially deleted in new
chr17	75286334	75289212	chr17:75286334-75289212	0	-	75286334	75286764	789624	4	125,170,94,124,	0,298,2163,2754,
#Partially deleted in new
chr17	75286646	75289422	chr17:75286646-75289422	0	-	75286646	75286764	789624	2	156,413,	0,2363,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	75288119	75289449	chr17:75288119-75289449	0	-	75288119	75288119	8553170	2	472,96,	0,1234,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	75318075	75405709	chr17:75318075-75405709	1	-	75320367	75393628	0	5	2478,169,98,215,221,	0,3583,14624,75475,87413,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	75318075	75405653	chr17:75318075-75405653	3	-	75320367	75393628	0	6	2478,169,123,98,215,165,	0,3583,7822,14624,75475,87413,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	75318075	75405486	chr17:75318075-75405486	1	-	75320367	75393628	0	6	2478,169,123,98,215,646,	0,3583,7822,14624,75475,86765,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	75318075	75393656	chr17:75318075-75393656	1	-	75320367	75393628	0	4	2478,169,98,106,	0,3583,14624,75475,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	75318075	75393864	chr17:75318075-75393864	1	-	75320367	75393628	0	5	2478,169,123,98,314,	0,3583,7822,14624,75475,
#Partially deleted in new
chr17	75318075	75321753	chr17:75318075-75321753	0	-	75318763	75321753	789624	3	222,42,95,	0,679,3583,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	75319478	75405699	chr17:75319478-75405699	0	-	75320367	75393628	789624	7	352,543,169,123,98,215,211,	0,532,2180,6419,13221,74072,86010,
#Partially deleted in new
chr17	75320340	75393803	chr17:75320340-75393803	1	-	75320381	75393628	789624	4	213,123,98,253,	0,5557,12359,73210,
#Partially deleted in new
chr17	75320344	75326338	chr17:75320344-75326338	0	-	75320344	75320344	8553170	4	209,169,123,100,	0,1314,5553,5894,
#Partially deleted in new
chr17	75321794	75394033	chr17:75321794-75394033	0	-	75321794	75393628	789624	5	33,123,98,215,115,	0,4103,10905,71756,72124,
#Deleted in new
chr17	75338826	75339147	chr17:75338826-75339147	7	+	75338826	75338826	16724991	1	321,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	75344404	75373662	chr17:75344404-75373662	3	+	75344404	75344404	8553170	2	33,370,	0,28888,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	75370946	75373736	chr17:75370946-75373736	3	-	75370946	75370946	8553170	1	2790,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	75387489	75393806	chr17:75387489-75393806	0	-	75387489	75387489	8553170	2	305,256,	0,6061,
#Partially deleted in new
chr17	75393403	75405681	chr17:75393403-75405681	0	-	75393403	75393403	8553170	2	362,193,	0,12085,
#Deleted in new
chr17	75394122	75394963	chr17:75394122-75394963	3	+	75394122	75394122	8553170	2	223,149,	0,692,
#Deleted in new
chr17	75406068	75406162	chr17:75406068-75406162	3	+	75406068	75406068	5263520	1	94,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	75409085	75409188	chr17:75409085-75409188	3	-	75409085	75409085	8553170	1	103,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	75431989	75432087	chr17:75431989-75432087	3	+	75431989	75431989	8553170	1	98,	0,
#Partially deleted in new
chr17	75441158	75486380	chr17:75441158-75486380	0	+	75471905	75486380	789624	5	85,130,120,128,91,	0,30641,44269,44712,45131,
#Partially deleted in new
chr17	75456463	75500082	chr17:75456463-75500082	3	+	75471905	75499334	789624	32	288,130,120,128,137,203,152,103,87,117,57,105,153,210,316,174,103,218,182,139,116,100,109,190,78,86,82,149,95,94,171,821,	0,15336,28964,29407,29826,31468,32295,32802,33112,33770,34238,34585,34839,35227,36010,36465,37027,37235,38163,38432,38820,39080,39502,39818,40266,40649,41317,41711,41980,42165,42448,42798,
#Partially deleted in new
chr17	75456640	75489661	chr17:75456640-75489661	0	+	75456640	75456640	8553170	4	111,130,103,86,	0,15159,32625,32935,
#Partially deleted in new
chr17	75456640	75500090	chr17:75456640-75500090	0	+	75456640	75456640	8553170	31	111,130,120,128,137,203,152,103,87,117,57,105,153,210,316,665,218,182,139,116,100,109,190,78,86,82,149,95,94,171,829,	0,15159,28787,29230,29649,31291,32118,32625,32935,33593,34061,34408,34662,35050,35833,36288,37058,37986,38255,38643,38903,39325,39641,40089,40472,41140,41534,41803,41988,42271,42621,
#Partially deleted in new
chr17	75456640	75486339	chr17:75456640-75486339	0	+	75485942	75486339	789624	5	111,156,120,128,50,	0,15159,28787,29230,29649,
#Partially deleted in new
chr17	75456649	75499645	chr17:75456649-75499645	1	+	75471905	75499334	789624	24	102,130,57,105,153,210,316,174,103,218,182,139,116,100,109,190,78,86,82,149,95,94,171,384,	0,15150,34052,34399,34653,35041,35824,36279,36841,37049,37977,38246,38634,38894,39316,39632,40080,40463,41131,41525,41794,41979,42262,42612,
#Partially deleted in new
chr17	75456649	75491379	chr17:75456649-75491379	0	+	75490323	75491379	789624	6	102,64,117,57,105,77,	0,15150,33584,34052,34399,34653,
#Partially deleted in new
chr17	75456649	75485898	chr17:75456649-75485898	0	+	75471905	75485898	789624	5	102,184,130,120,28,	0,644,15150,28778,29221,
#Partially deleted in new
chr17	75456653	75485780	chr17:75456653-75485780	0	+	75456653	75456653	8553170	3	98,130,353,	0,15146,28774,
#Partially deleted in new
chr17	75456659	75457685	chr17:75456659-75457685	0	+	75456659	75456659	8553170	2	92,392,	0,634,
#Partially deleted in new
chr17	75459706	75486392	chr17:75459706-75486392	0	+	75471905	75486392	789624	5	64,130,120,128,103,	0,12093,25721,26164,26583,
#Partially deleted in new
chr17	75476497	75499744	chr17:75476497-75499744	1	+	75476689	75499334	789624	31	246,120,128,137,203,152,103,87,117,57,105,153,210,316,174,103,218,182,139,116,100,109,190,78,86,82,149,95,94,171,483,	0,8930,9373,9792,11434,12261,12768,13078,13736,14204,14551,14805,15193,15976,16431,16993,17201,18129,18398,18786,19046,19468,19784,20232,20615,21283,21677,21946,22131,22414,22764,
#Partially deleted in new
chr17	75476546	75500090	chr17:75476546-75500090	0	+	75476546	75476546	8553170	29	197,120,556,203,152,103,87,117,57,105,153,210,316,665,218,99,139,116,100,109,190,78,86,82,149,95,94,207,829,	0,8881,9324,11385,12212,12719,13029,13687,14155,14502,14756,15144,15927,16382,17152,18163,18349,18737,18997,19419,19735,20183,20566,21234,21628,21897,22082,22365,22715,
#Partially deleted in new
chr17	75476689	75487955	chr17:75476689-75487955	0	+	75476689	75487327	789624	6	54,120,128,137,103,24,	0,8738,9181,9600,10588,11242,
#Partially deleted in new
chr17	75485395	75488014	chr17:75485395-75488014	0	+	75485395	75485395	8553170	4	152,128,137,83,	0,475,894,2536,
#Partially deleted in new
chr17	75486331	75491102	chr17:75486331-75491102	0	+	75486331	75489339	789624	6	95,103,87,117,57,54,	0,2934,3244,3902,4370,4717,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	75486344	75489817	chr17:75486344-75489817	0	+	75486344	75486344	8553170	5	82,203,152,103,17,	0,1587,2414,2921,3456,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	75490057	75491079	chr17:75490057-75491079	0	+	75490057	75490057	8553170	3	293,57,31,	0,644,991,
#Deleted in new
chr17	75490279	75492278	chr17:75490279-75492278	0	+	75490279	75490279	8553170	5	71,57,105,165,588,	0,422,769,1023,1411,
#Deleted in new
chr17	75491048	75492762	chr17:75491048-75492762	0	+	75491048	75492762	789624	4	105,165,210,289,	0,254,642,1425,
#Deleted in new
chr17	75491376	75493769	chr17:75491376-75493769	0	+	75491376	75493769	789624	6	79,162,316,174,103,71,	0,314,1097,1552,2114,2322,
#Deleted in new
chr17	75491698	75492742	chr17:75491698-75492742	0	+	75491698	75492256	789624	3	202,99,269,	0,540,775,
#Deleted in new
chr17	75492203	75492920	chr17:75492203-75492920	0	+	75492203	75492203	8553170	2	134,447,	0,270,
#Deleted in new
chr17	75492275	75492983	chr17:75492275-75492983	0	+	75492275	75492275	8553170	2	514,55,	0,653,
#Deleted in new
chr17	75492559	75493530	chr17:75492559-75493530	0	+	75492559	75492559	8553170	2	543,40,	0,931,
#Deleted in new
chr17	75494887	75496391	chr17:75494887-75496391	0	+	75494887	75494887	8553170	5	147,116,100,109,110,	0,396,656,1078,1394,
#Deleted in new
chr17	75495286	75496401	chr17:75495286-75496401	0	+	75495286	75495286	8553170	3	113,100,436,	0,257,679,
#Partially deleted in new
chr17	75495541	75500082	chr17:75495541-75500082	0	+	75495541	75495541	8553170	8	930,78,86,82,149,279,171,821,	0,1188,1571,2239,2633,2902,3370,3720,
#Partially deleted in new
chr17	75496333	75499368	chr17:75496333-75499368	0	+	75496333	75499334	789624	8	138,86,82,149,95,94,171,107,	0,779,1447,1841,2110,2295,2578,2928,
#Partially deleted in new
chr17	75496727	75498943	chr17:75496727-75498943	0	+	75496727	75496727	8553170	6	80,86,82,149,95,315,	0,385,1053,1447,1716,1901,
#Partially deleted in new
chr17	75497165	75499073	chr17:75497165-75499073	0	+	75497165	75499073	789624	6	33,82,62,95,94,162,	0,615,1096,1278,1463,1746,
#Deleted in new
chr17	75497802	75498720	chr17:75497802-75498720	0	+	75497802	75498720	789624	4	60,149,83,92,	0,372,653,826,
#Deleted in new
chr17	75498216	75498814	chr17:75498216-75498814	0	+	75498216	75498216	8553170	2	107,371,	0,227,
#Deleted in new
chr17	75498547	75498628	chr17:75498547-75498628	3	+	75498547	75498547	5263520	1	81,	0,
#Partially deleted in new
chr17	75500260	75515583	chr17:75500260-75515583	3	-	75501079	75513804	0	20	910,223,1476,139,102,111,92,61,122,262,95,109,109,131,96,146,98,52,498,183,	0,1207,1518,3128,3398,3591,3954,4159,4311,4551,5296,5560,6044,6322,6538,6723,7323,7973,13450,15140,
#Partially deleted in new
chr17	75500808	75509888	chr17:75500808-75509888	1	-	75501079	75507127	0	19	362,223,1476,139,102,111,92,61,122,262,95,109,109,131,96,146,98,52,164,	0,659,970,2580,2850,3043,3406,3611,3763,4003,4748,5012,5496,5774,5990,6175,6775,7425,8916,
#Deleted in new
chr17	75503089	75503940	chr17:75503089-75503940	0	-	75503089	75503089	8553170	3	165,372,89,	0,299,762,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	75505318	75515440	chr17:75505318-75515440	1	-	75505514	75513804	789624	10	333,109,109,131,96,146,98,52,498,40,	0,502,986,1264,1480,1665,2265,2915,8392,10082,
#Deleted in new
chr17	75506666	75507851	chr17:75506666-75507851	0	-	75506666	75506666	8553170	4	47,96,146,268,	0,132,317,917,
#Deleted in new
chr17	75506742	75507635	chr17:75506742-75507635	0	-	75506742	75506742	8553170	3	152,146,52,	0,241,841,
#Deleted in new
chr17	75513727	75515260	chr17:75513727-75515260	0	-	75513727	75513804	789624	2	481,49,	0,1484,
#Deleted in new
chr17	75516059	75519047	chr17:75516059-75519047	0	+	75517178	75519047	789624	5	327,64,84,99,53,	0,949,1101,1497,2935,
#Partially deleted in new
chr17	75516524	75524739	chr17:75516524-75524739	3	+	75516560	75524412	789624	11	92,165,64,84,99,53,102,629,61,117,478,	0,221,484,636,1032,2470,4884,5180,6750,7138,7737,
#Deleted in new
chr17	75516525	75517475	chr17:75516525-75517475	0	+	75516525	75516525	8553170	3	91,327,315,	0,220,635,
#Partially deleted in new
chr17	75516535	75521438	chr17:75516535-75521438	0	+	75516535	75516535	8553170	7	81,165,64,84,99,45,30,	0,210,473,625,1021,2467,4873,
#Partially deleted in new
chr17	75516560	75523287	chr17:75516560-75523287	0	+	75516560	75522085	789624	8	56,64,84,99,53,102,327,13,	0,448,600,996,2434,4848,5446,6714,
#Partially deleted in new
chr17	75516794	75521897	chr17:75516794-75521897	0	+	75516794	75521367	789624	7	116,64,84,99,53,156,193,	0,214,366,762,2200,4560,4910,
#Partially deleted in new
chr17	75516811	75522115	chr17:75516811-75522115	0	+	75516811	75521429	789624	6	99,230,99,53,102,411,	0,203,745,2183,4597,4893,
#Deleted in new
chr17	75516969	75517651	chr17:75516969-75517651	0	+	75516969	75516969	8553170	3	103,84,95,	0,191,587,
#Partially deleted in new
chr17	75521992	75524693	chr17:75521992-75524693	0	+	75521992	75524332	789624	4	529,61,117,432,	0,1282,1670,2269,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	75522825	75524420	chr17:75522825-75524420	0	+	75522825	75522825	8553170	3	510,117,159,	0,837,1436,
#Deleted in new
chr17	75523601	75524733	chr17:75523601-75524733	0	+	75523601	75523601	8553170	2	178,472,	0,660,
#Partially deleted in new
chr17	75525079	75559332	chr17:75525079-75559332	0	+	75543426	75559332	789624	6	95,105,98,82,116,81,	0,18317,30966,33075,33432,34172,
#Partially deleted in new
chr17	75525725	75575208	chr17:75525725-75575208	3	+	75543426	75574906	0	25	100,105,98,82,116,159,163,133,55,155,218,68,154,105,293,151,151,117,167,265,151,29,48,59,338,	0,17671,30320,32429,32786,33526,37290,37605,38026,38627,42750,43046,43252,43495,44237,44622,45224,45941,46172,47288,47755,48226,48487,48884,49145,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	75525731	75564721	chr17:75525731-75564721	1	+	75543426	75564542	0	10	94,105,98,82,116,159,163,133,55,369,	0,17665,30314,32423,32780,33520,37284,37599,38020,38621,
#Partially deleted in new
chr17	75525738	75575207	chr17:75525738-75575207	1	+	75543426	75574878	0	26	87,105,98,82,116,159,163,133,55,155,218,68,154,105,293,151,151,117,167,265,151,29,48,43,59,337,	0,17658,30307,32416,32773,33513,37277,37592,38013,38614,42737,43033,43239,43482,44224,44609,45211,45928,46159,47275,47742,48213,48474,48714,48871,49132,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	75525778	75564723	chr17:75525778-75564723	1	+	75543426	75564542	0	11	47,64,105,98,82,116,159,163,133,55,371,	0,7863,17618,30267,32376,32733,33473,37237,37552,37973,38574,
#Partially deleted in new
chr17	75525788	75558566	chr17:75525788-75558566	0	+	75543426	75558566	789624	6	37,106,105,98,82,55,	0,12742,17608,30257,32366,32723,
#Partially deleted in new
chr17	75542634	75558572	chr17:75542634-75558572	0	+	75543426	75558572	789624	5	438,105,98,82,61,	0,762,13411,15520,15877,
#Partially deleted in new
chr17	75543153	75556089	chr17:75543153-75556089	0	+	75543426	75556089	789624	3	55,105,44,	0,243,12892,
#Partially deleted in new
chr17	75543260	75559299	chr17:75543260-75559299	0	+	75543426	75559299	789624	5	241,98,82,116,48,	0,12785,14894,15251,15991,
#Partially deleted in new
chr17	75546147	75559345	chr17:75546147-75559345	0	+	75546245	75559345	789624	5	176,98,82,116,94,	0,9898,12007,12364,13104,
#Partially deleted in new
chr17	75557804	75575208	chr17:75557804-75575208	0	+	75557804	75557804	8553170	22	432,116,159,163,133,55,155,218,68,154,105,293,151,151,117,167,265,151,29,48,59,338,	0,707,1447,5211,5526,5947,6548,10671,10967,11173,11416,12158,12543,13145,13862,14093,15209,15676,16147,16408,16805,17066,
#Partially deleted in new
chr17	75558974	75563369	chr17:75558974-75563369	0	+	75558974	75558974	8553170	3	436,163,39,	0,4041,4356,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	75562279	75564700	chr17:75562279-75564700	0	+	75562279	75562279	8553170	2	1527,348,	0,2073,
#Partially deleted in new
chr17	75563773	75575194	chr17:75563773-75575194	0	+	75563773	75568785	789624	18	33,155,57,68,154,105,293,151,151,117,167,265,151,29,48,43,59,321,	0,579,4863,4998,5204,5447,6189,6574,7176,7893,8124,9240,9707,10178,10439,10679,10836,11100,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	75567919	75575207	chr17:75567919-75575207	0	+	75567919	75567919	8553170	15	774,68,154,105,293,151,151,117,167,265,151,29,150,59,337,	0,852,1058,1301,2043,2428,3030,3747,3978,5094,5561,6032,6191,6690,6951,
#Partially deleted in new
chr17	75568817	75570436	chr17:75568817-75570436	0	+	75568817	75569981	789624	5	22,171,105,293,89,	0,143,403,1145,1530,
#Partially deleted in new
chr17	75571424	75573253	chr17:75571424-75573253	0	+	75571424	75571424	8553170	3	359,167,240,	0,473,1589,
#Deleted in new
chr17	75573554	75574921	chr17:75573554-75574921	0	+	75573554	75574193	789624	6	77,29,150,43,59,51,	0,397,556,898,1055,1316,
#Deleted in new
chr17	75573576	75575121	chr17:75573576-75575121	0	+	75573576	75573576	8553170	5	55,29,48,216,251,	0,375,636,876,1294,
#Deleted in new
chr17	75573951	75574668	chr17:75573951-75574668	0	+	75573951	75573951	8553170	2	29,456,	0,261,
#Deleted in new
chr17	75574153	75575207	chr17:75574153-75575207	0	+	75574153	75574153	8553170	4	107,43,59,334,	0,299,456,720,
#Partially deleted in new
chr17	75588057	75616390	chr17:75588057-75616390	0	+	75588057	75590340	789624	33	2328,110,75,112,104,64,78,162,133,96,132,126,78,116,46,94,60,58,131,96,236,179,73,53,162,101,77,82,99,98,192,79,79,	0,2849,3114,3543,3919,4180,4406,4621,6782,8402,8710,13380,14459,14772,14974,22108,22842,23543,23828,24740,24916,25235,25647,25923,26141,26525,26715,26903,27182,27445,27635,28011,28254,
#Partially deleted in new
chr17	75588057	75620523	chr17:75588057-75620523	0	+	75588057	75590340	789624	42	2328,340,112,104,64,162,114,59,133,96,132,126,78,116,46,125,118,158,94,60,58,131,96,236,179,73,162,101,77,82,99,98,192,220,113,60,76,119,119,142,112,57,	0,2849,3543,3919,4180,4621,6417,6643,6782,8402,8710,13380,14459,14772,14974,15130,17446,17806,22108,22842,23543,23828,24740,24916,25235,25647,26141,26525,26715,26903,27182,27445,27635,29027,29752,30068,31085,31300,31623,31821,32188,32409,
#Partially deleted in new
chr17	75588057	75626484	chr17:75588057-75626484	0	+	75588057	75613077	789624	59	2186,75,97,104,64,114,162,114,59,133,96,87,126,78,116,46,125,118,195,71,94,58,131,79,236,179,73,114,101,77,82,99,98,192,79,88,220,113,60,76,119,43,221,112,170,146,64,70,77,74,116,95,97,146,116,134,212,141,78,	0,3114,3558,3919,4180,4370,4621,6417,6643,6782,8402,8755,13380,14459,14772,14974,15130,17446,17806,18875,22108,23543,23828,24757,24916,25235,25647,26189,26525,26715,26903,27182,27445,27635,28011,28816,29027,29752,30068,31085,31300,31623,31742,32188,32409,32973,33287,33443,33946,35723,35891,36117,36485,36713,37065,37469,37708,38030,38349,
#Partially deleted in new
chr17	75588057	75591712	chr17:75588057-75591712	0	+	75588057	75591712	789624	5	2186,64,110,75,97,	0,2568,2849,3114,3558,
#Partially deleted in new
chr17	75590340	75591246	chr17:75590340-75591246	0	+	75590340	75590340	8553170	3	45,64,75,	0,285,831,
#Partially deleted in new
chr17	75590776	75592491	chr17:75590776-75592491	0	+	75590776	75590776	8553170	6	240,75,97,104,64,28,	0,395,839,1200,1461,1687,
#Partially deleted in new
chr17	75591467	75592050	chr17:75591467-75592050	0	+	75591467	75591467	8553170	2	245,238,	0,345,
#Partially deleted in new
chr17	75592465	75593031	chr17:75592465-75593031	0	+	75592465	75592465	8553170	2	76,353,	0,213,
#Partially deleted in new
chr17	75594461	75595046	chr17:75594461-75595046	0	+	75594461	75594461	8553170	2	127,346,	0,239,
#Partially deleted in new
chr17	75602300	75603061	chr17:75602300-75603061	0	+	75602300	75602300	8553170	3	294,116,30,	0,529,731,
#Partially deleted in new
chr17	75602516	75610933	chr17:75602516-75610933	0	+	75602516	75610933	789624	8	78,116,46,125,118,158,94,34,	0,313,515,671,2987,3347,7649,8383,
#Partially deleted in new
chr17	75605615	75610935	chr17:75605615-75610935	0	+	75605615	75606969	789624	5	6,158,71,94,36,	0,248,1317,4550,5284,
#Partially deleted in new
chr17	75605866	75607130	chr17:75605866-75607130	0	+	75605866	75605866	8553170	2	155,198,	0,1066,
#Partially deleted in new
chr17	75610698	75613107	chr17:75610698-75613107	0	+	75610698	75610698	8553170	6	33,60,58,131,96,134,	0,201,902,1187,2099,2275,
#Partially deleted in new
chr17	75610698	75626484	chr17:75610698-75626484	1	+	75610956	75626484	789624	42	33,60,58,131,96,236,179,73,114,101,77,82,99,98,192,79,135,262,88,220,113,60,76,119,43,221,112,170,146,64,70,77,74,116,95,97,146,116,134,212,141,78,	0,201,902,1187,2099,2275,2594,3006,3548,3884,4074,4262,4541,4804,4994,5370,5613,5825,6175,6386,7111,7427,8444,8659,8982,9101,9547,9768,10332,10646,10802,11305,13082,13250,13476,13844,14072,14424,14828,15067,15389,15708,
#Partially deleted in new
chr17	75613292	75626121	chr17:75613292-75626121	0	+	75613292	75614032	789624	34	179,73,53,162,101,77,82,99,98,192,79,88,220,113,60,76,119,119,142,112,710,64,70,77,74,116,95,78,97,146,116,134,134,34,	0,412,688,906,1290,1480,1668,1947,2210,2400,2776,3581,3792,4517,4833,5850,6065,6388,6586,6953,7174,8052,8208,8711,10488,10656,10882,11077,11250,11478,11830,12234,12551,12795,
#Deleted in new
chr17	75615264	75616381	chr17:75615264-75616381	0	+	75615264	75615856	789624	5	74,78,192,79,70,	0,258,428,804,1047,
#Deleted in new
chr17	75615862	75616679	chr17:75615862-75616679	0	+	75615862	75615862	8553170	3	22,79,368,	0,206,449,
#Deleted in new
chr17	75616659	75617915	chr17:75616659-75617915	0	+	75616659	75616659	8553170	3	302,220,106,	0,425,1150,
#Partially deleted in new
chr17	75616689	75619219	chr17:75616689-75619219	0	+	75616689	75617167	789624	6	96,77,220,113,60,77,	0,195,395,1120,1436,2453,
#Partially deleted in new
chr17	75617579	75619563	chr17:75617579-75619563	0	+	75617579	75617579	8553170	5	98,113,60,76,206,	0,230,546,1563,1778,
#Partially deleted in new
chr17	75617599	75619182	chr17:75617599-75619182	0	+	75617599	75617599	8553170	3	323,60,40,	0,526,1543,
#Deleted in new
chr17	75619074	75619982	chr17:75619074-75619982	0	+	75619074	75619074	8553170	3	144,119,302,	0,283,606,
#Deleted in new
chr17	75619878	75620921	chr17:75619878-75620921	0	+	75619878	75620681	789624	3	142,112,455,	0,367,588,
#Deleted in new
chr17	75620207	75621372	chr17:75620207-75621372	0	+	75620207	75620207	8553170	4	150,170,146,28,	0,259,823,1137,
#Deleted in new
chr17	75620207	75620872	chr17:75620207-75620872	0	+	75620207	75620207	8553170	2	150,406,	0,259,
#Partially deleted in new
chr17	75620331	75624058	chr17:75620331-75624058	0	+	75620331	75621065	789624	7	26,146,64,70,77,74,110,	0,699,1013,1169,1672,3449,3617,
#Deleted in new
chr17	75620893	75622058	chr17:75620893-75622058	0	+	75620893	75620893	8553170	3	283,226,55,	0,451,1110,
#Deleted in new
chr17	75621069	75621856	chr17:75621069-75621856	0	+	75621069	75621069	8553170	3	107,64,356,	0,275,431,
#Partially deleted in new
chr17	75621074	75624897	chr17:75621074-75624897	0	+	75621074	75624897	789624	10	102,64,70,77,74,50,95,78,97,127,	0,270,426,929,2706,2940,3100,3295,3468,3696,
#Deleted in new
chr17	75621092	75621825	chr17:75621092-75621825	0	+	75621092	75621092	8553170	2	84,481,	0,252,
#Partially deleted in new
chr17	75621881	75624554	chr17:75621881-75624554	0	+	75621881	75621881	8553170	6	199,74,116,75,78,12,	0,1899,2067,2293,2488,2661,
#Deleted in new
chr17	75623789	75625649	chr17:75623789-75625649	0	+	75623789	75624425	789624	8	65,116,75,78,97,146,116,123,	0,159,385,580,753,981,1333,1737,
#Deleted in new
chr17	75623827	75625888	chr17:75623827-75625888	0	+	75623827	75624885	789624	9	27,116,95,78,146,146,116,134,45,	0,121,347,542,715,943,1295,1699,2016,
#Deleted in new
chr17	75624825	75626501	chr17:75624825-75626501	0	+	75624825	75625540	789624	6	91,116,130,134,141,95,	0,297,705,1018,1262,1581,
#Partially deleted in new
chr17	75626844	75634223	chr17:75626844-75634223	0	-	75626844	75626844	8553170	13	678,70,225,91,542,135,94,74,59,37,100,219,765,	0,778,1373,1827,2089,2863,3339,3774,3934,4129,4305,4605,6614,
#Partially deleted in new
chr17	75626844	75628874	chr17:75626844-75628874	0	-	75626844	75626844	8553170	4	678,70,225,203,	0,778,1373,1827,
#Partially deleted in new
chr17	75626853	75667189	chr17:75626853-75667189	3	-	75627421	75666557	0	20	669,70,225,91,542,135,94,74,59,37,100,219,80,163,112,103,519,122,144,146,	0,769,1364,1818,2080,2854,3330,3765,3925,4120,4296,4596,24332,31444,34101,34752,35625,38197,39574,40190,
#Partially deleted in new
chr17	75626853	75667142	chr17:75626853-75667142	1	-	75627421	75666557	0	20	669,70,225,91,542,135,94,74,59,37,100,219,80,163,112,103,519,41,144,99,	0,769,1364,1818,2080,2854,3330,3765,3925,4120,4296,4596,24332,31444,34101,34752,35625,38197,39574,40190,
#Partially deleted in new
chr17	75626909	75629095	chr17:75626909-75629095	0	-	75627083	75629095	789624	4	315,225,91,162,	0,1308,1762,2024,
#Deleted in new
chr17	75628396	75629442	chr17:75628396-75629442	0	-	75628396	75629442	789624	3	46,154,509,	0,275,537,
#Partially deleted in new
chr17	75629317	75639940	chr17:75629317-75639940	0	-	75629317	75631164	789624	9	158,135,94,74,59,37,100,219,72,	0,390,866,1301,1461,1656,1832,2132,10551,
#Deleted in new
chr17	75629560	75630234	chr17:75629560-75630234	0	-	75629560	75629560	8553170	2	282,51,	0,623,
#Deleted in new
chr17	75629774	75630634	chr17:75629774-75630634	0	-	75629774	75629774	8553170	2	68,451,	0,409,
#Partially deleted in new
chr17	75631456	75667088	chr17:75631456-75667088	0	-	75631456	75666557	789624	8	212,80,163,112,103,519,122,661,	0,19729,26841,29498,30149,31022,33594,34971,
#Partially deleted in new
chr17	75631465	75639990	chr17:75631465-75639990	0	-	75631465	75631465	8553170	3	203,222,122,	0,7512,8403,
#Partially deleted in new
chr17	75631491	75660988	chr17:75631491-75660988	0	-	75650639	75660988	789624	5	177,202,80,163,34,	0,19025,19694,26806,29463,
#Partially deleted in new
chr17	75633433	75641404	chr17:75633433-75641404	3	+	75640201	75640897	789624	3	769,163,614,	0,6732,7357,
#Deleted in new
chr17	75633445	75634202	chr17:75633445-75634202	0	+	75633445	75633445	8553170	2	493,169,	0,588,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	75636594	75641400	chr17:75636594-75641400	1	+	75640201	75640897	789624	2	3734,610,	0,4196,
#Deleted in new
chr17	75638545	75639962	chr17:75638545-75639962	0	-	75638545	75638545	8553170	3	358,178,94,	0,476,1323,
#Deleted in new
chr17	75638761	75639973	chr17:75638761-75639973	0	-	75638761	75638761	8553170	2	438,105,	0,1107,
#Deleted in new
chr17	75646242	75647975	chr17:75646242-75647975	3	+	75647376	75647565	789624	3	129,132,605,	0,412,1128,
#Deleted in new
chr17	75646436	75647977	chr17:75646436-75647977	1	+	75647376	75647565	789624	2	350,607,	0,934,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	75648864	75667189	chr17:75648864-75667189	1	-	75651181	75666557	0	8	2401,163,112,103,519,122,144,146,	0,9433,12090,12741,13614,16186,17563,18179,
#Partially deleted in new
chr17	75650358	75667189	chr17:75650358-75667189	1	-	75650639	75666557	0	9	360,80,163,112,103,519,122,144,146,	0,827,7939,10596,11247,12120,14692,16069,16685,
#Partially deleted in new
chr17	75650361	75667173	chr17:75650361-75667173	1	-	75650639	75666557	0	9	357,80,163,112,103,519,122,193,273,	0,824,7936,10593,11244,12117,14689,16066,16539,
#Partially deleted in new
chr17	75651094	75662960	chr17:75651094-75662960	0	-	75658346	75662960	789624	3	171,163,482,	0,7203,11384,
#Partially deleted in new
chr17	75652447	75658360	chr17:75652447-75658360	0	-	75652447	75652447	8553170	2	119,63,	0,5850,
#Partially deleted in new
chr17	75667115	75708059	chr17:75667115-75708059	3	+	75667372	75706521	789624	11	363,110,48,43,89,92,61,52,59,85,1720,	0,1400,4700,26324,32667,35364,36195,36692,37640,38892,39224,
#Partially deleted in new
chr17	75667250	75690716	chr17:75667250-75690716	0	+	75667372	75668053	789624	5	228,121,110,48,46,	0,798,1265,4565,23420,
#Partially deleted in new
chr17	75667345	75708054	chr17:75667345-75708054	1	+	75667372	75706521	789624	10	133,110,43,89,92,61,52,59,85,1715,	0,1170,26094,32437,35134,35965,36462,37410,38662,38994,
#Partially deleted in new
chr17	75667345	75693482	chr17:75667345-75693482	0	+	75667345	75667345	8553170	6	133,110,48,102,138,43,	0,1170,4470,23325,24048,26094,
#Partially deleted in new
chr17	75667350	75703158	chr17:75667350-75703158	0	+	75667350	75667350	8553170	6	128,110,48,43,89,679,	0,1165,4465,26089,32432,35129,
#Partially deleted in new
chr17	75667350	75672156	chr17:75667350-75672156	0	+	75667350	75667350	8553170	3	128,110,341,	0,1165,4465,
#Partially deleted in new
chr17	75667355	75706701	chr17:75667355-75706701	0	+	75667372	75704774	789624	9	123,110,48,43,89,92,59,85,362,	0,1160,4460,26084,32427,35124,37400,38652,38984,
#Partially deleted in new
chr17	75667361	75704814	chr17:75667361-75704814	0	+	75667372	75671823	789624	8	117,48,43,89,92,61,52,59,	0,4454,26078,32421,35118,35949,36446,37394,
#Partially deleted in new
chr17	75667365	75706824	chr17:75667365-75706824	0	+	75667372	75706020	789624	11	113,110,43,89,92,61,52,59,83,85,485,	0,1150,26074,32417,35114,35945,36442,37390,38245,38642,38974,
#Partially deleted in new
chr17	75667365	75691890	chr17:75667365-75691890	0	+	75667365	75667365	8553170	5	113,110,48,102,497,	0,1150,4450,23305,24028,
#Partially deleted in new
chr17	75667365	75703319	chr17:75667365-75703319	0	+	75667365	75667365	8553170	7	113,110,48,43,89,92,373,	0,1150,4450,26074,32417,35114,35581,
#Partially deleted in new
chr17	75667365	75699872	chr17:75667365-75699872	0	+	75667372	75668053	789624	6	113,121,110,48,43,90,	0,683,1150,4450,26074,32417,
#Partially deleted in new
chr17	75667369	75705746	chr17:75667369-75705746	0	+	75667369	75667369	8553170	8	109,110,48,43,89,92,59,136,	0,1146,4446,26070,32413,35110,37386,38241,
#Partially deleted in new
chr17	75667370	75708062	chr17:75667370-75708062	0	+	75667372	75703859	789624	10	108,110,48,43,89,92,52,59,85,1723,	0,1145,4445,26069,32412,35109,36437,37385,38637,38969,
#Partially deleted in new
chr17	75667373	75706756	chr17:75667373-75706756	0	+	75667373	75705697	789624	11	105,110,48,43,89,92,61,52,59,482,417,	0,1142,4442,26066,32409,35106,35937,36434,37382,38237,38966,
#Partially deleted in new
chr17	75667425	75706545	chr17:75667425-75706545	0	+	75667425	75706521	789624	12	53,110,48,102,43,89,92,61,52,59,85,206,	0,1090,4390,23245,26014,32357,35054,35885,36382,37330,38582,38914,
#Partially deleted in new
chr17	75668515	75700259	chr17:75668515-75700259	0	+	75668515	75699895	789624	4	110,48,43,477,	0,3300,24924,31267,
#Deleted in new
chr17	75679473	75679967	chr17:75679473-75679967	3	-	75679473	75679473	8553170	2	328,24,	0,470,
#Deleted in new
chr17	75683542	75684042	chr17:75683542-75684042	0	-	75683542	75683542	8553170	2	236,66,	0,434,
#Deleted in new
chr17	75683547	75684799	chr17:75683547-75684799	3	-	75683547	75683547	8553170	2	231,335,	0,917,
#Partially deleted in new
chr17	75691569	75706774	chr17:75691569-75706774	0	+	75691569	75691569	8553170	8	1913,89,92,61,52,59,85,435,	0,8213,10910,11741,12238,13186,14438,14770,
#Partially deleted in new
chr17	75692043	75704768	chr17:75692043-75704768	0	+	75699808	75704768	789624	7	484,43,89,92,61,52,13,	0,1396,7739,10436,11267,11764,12712,
#Partially deleted in new
chr17	75692545	75704814	chr17:75692545-75704814	0	+	75699808	75704814	789624	7	142,43,89,92,61,52,59,	0,894,7237,9934,10765,11262,12210,
#Deleted in new
chr17	75702479	75705480	chr17:75702479-75705480	0	+	75702479	75702479	8553170	4	92,61,52,725,	0,831,1328,2276,
#Deleted in new
chr17	75703265	75706701	chr17:75703265-75706701	0	+	75703265	75703265	8553170	5	440,52,59,85,362,	0,542,1490,2742,3074,
#Deleted in new
chr17	75703769	75706757	chr17:75703769-75706757	0	+	75703769	75703769	8553170	4	90,59,85,418,	0,986,2238,2570,
#Deleted in new
chr17	75704713	75706406	chr17:75704713-75706406	0	+	75704713	75704713	8553170	3	101,85,67,	0,1294,1626,
#Deleted in new
chr17	75704771	75706771	chr17:75704771-75706771	0	+	75704771	75704771	8553170	1	2000,	0,
#Deleted in new
chr17	75706184	75706756	chr17:75706184-75706756	0	+	75706184	75706184	8553170	2	45,417,	0,155,
#Partially deleted in new
chr17	75721327	75757604	chr17:75721327-75757604	1	+	75724703	75757555	0	39	236,89,83,102,205,97,172,264,90,123,162,77,203,104,99,130,123,107,34,192,104,59,24,149,180,149,205,158,181,138,183,132,240,150,189,156,165,111,189,	0,3366,5867,6076,6323,7049,7937,8913,9547,9918,10484,10835,12162,14723,14960,15237,15994,16210,18344,18552,19030,19465,19654,21013,21254,22385,27513,28783,29352,29646,30846,31118,33248,34373,35101,35376,35615,35872,36088,
#Partially deleted in new
chr17	75721435	75757818	chr17:75721435-75757818	3	+	75724703	75757555	0	40	177,89,83,102,205,97,172,264,90,123,162,77,203,104,99,130,123,107,34,192,104,59,24,149,180,149,205,158,181,138,183,132,210,240,150,189,156,165,111,403,	0,3258,5759,5968,6215,6941,7829,8805,9439,9810,10376,10727,12054,14615,14852,15129,15886,16102,18236,18444,18922,19357,19546,20905,21146,22277,27405,28675,29244,29538,30738,31010,32329,33140,34265,34993,35268,35507,35764,35980,
#Partially deleted in new
chr17	75721496	75757815	chr17:75721496-75757815	1	+	75724703	75757555	0	39	116,89,83,102,205,97,172,264,90,123,162,77,203,104,99,130,123,107,34,192,104,59,24,149,180,149,205,158,181,138,183,132,240,150,189,156,165,111,400,	0,3197,5698,5907,6154,6880,7768,8744,9378,9749,10315,10666,11993,14554,14791,15068,15825,16041,18175,18383,18861,19296,19485,20844,21085,22216,27344,28614,29183,29477,30677,30949,33079,34204,34932,35207,35446,35703,35919,
#Partially deleted in new
chr17	75721508	75741105	chr17:75721508-75741105	0	+	75721508	75721508	8553170	23	55,89,83,102,205,97,172,264,90,123,162,77,203,104,99,130,123,107,34,192,104,59,124,	0,3185,5686,5895,6142,6868,7756,8732,9366,9737,10303,10654,11981,14542,14779,15056,15813,16029,18163,18371,18849,19284,19473,
#Partially deleted in new
chr17	75724695	75757818	chr17:75724695-75757818	1	+	75724703	75757555	0	39	87,83,102,205,97,172,264,90,123,162,77,203,104,99,130,123,107,34,192,104,59,24,149,180,149,205,158,181,138,183,132,240,159,150,189,156,165,111,403,	0,2499,2708,2955,3681,4569,5545,6179,6550,7116,7467,8794,11355,11592,11869,12626,12842,14976,15184,15662,16097,16286,17645,17886,19017,24145,25415,25984,26278,27478,27750,29880,30359,31005,31733,32008,32247,32504,32720,
#Partially deleted in new
chr17	75724703	75742657	chr17:75724703-75742657	0	+	75724703	75724703	8553170	24	79,83,102,205,97,172,264,90,123,162,77,203,104,99,130,123,107,34,192,141,59,24,149,76,	0,2491,2700,2947,3673,4561,5537,6171,6542,7108,7459,8786,11347,11584,11861,12618,12834,14968,15176,15654,16089,16278,17637,17878,
#Partially deleted in new
chr17	75727800	75757818	chr17:75727800-75757818	0	+	75727800	75757705	789624	4	55,97,113,193,	0,576,1464,29825,
#Partially deleted in new
chr17	75731819	75739905	chr17:75731819-75739905	0	+	75731819	75731819	8553170	9	154,77,203,104,99,130,123,34,26,	0,343,1670,4231,4468,4745,5502,7852,8060,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	75751593	75765236	chr17:75751593-75765236	3	-	75758055	75765136	0	9	144,94,163,151,182,136,120,190,265,	0,6440,6616,6855,11110,11420,11726,12303,13378,
#Partially deleted in new
chr17	75751812	75755808	chr17:75751812-75755808	0	+	75751812	75751812	8553170	5	36,183,132,240,108,	0,361,633,2763,3888,
#Partially deleted in new
chr17	75754482	75755778	chr17:75754482-75755778	0	+	75754482	75754482	8553170	2	333,78,	0,1218,
#Partially deleted in new
chr17	75754617	75757002	chr17:75754617-75757002	0	+	75754617	75757002	789624	4	198,189,156,60,	0,1811,2086,2325,
#Partially deleted in new
chr17	75757038	75757818	chr17:75757038-75757818	0	+	75757038	75757321	789624	2	69,619,	0,161,
#Partially deleted in new
chr17	75757893	75763090	chr17:75757893-75763090	0	-	75758055	75763090	789624	5	234,163,151,92,77,	0,316,555,4810,5120,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	75757943	75765711	chr17:75757943-75765711	1	-	75758055	75765136	0	8	184,163,151,182,136,120,190,740,	0,266,505,4760,5070,5376,5953,7028,
#Partially deleted in new
chr17	75757971	75758518	chr17:75757971-75758518	0	-	75757971	75757971	8553170	2	156,309,	0,238,
#Partially deleted in new
chr17	75758511	75764005	chr17:75758511-75764005	0	-	75763134	75764005	789624	5	88,182,168,120,109,	0,4192,4502,4808,5385,
#Partially deleted in new
chr17	75758590	75765157	chr17:75758590-75765157	0	-	75758590	75758590	8553170	4	9,736,190,186,	0,4113,5306,6381,
#Partially deleted in new
chr17	75762757	75765192	chr17:75762757-75765192	0	-	75763659	75765136	789624	4	682,87,190,221,	0,823,1139,2214,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	75763382	75765133	chr17:75763382-75765133	0	-	75763382	75763382	8553170	2	704,162,	0,1589,
#Partially deleted in new
chr17	75776433	75779779	chr17:75776433-75779779	1	-	75778594	75779174	0	4	2290,154,138,123,	0,2376,2613,3223,
#Partially deleted in new
chr17	75778019	75779778	chr17:75778019-75779778	0	-	75778019	75778019	8553170	3	704,73,117,	0,790,1642,
#Partially deleted in new
chr17	75778071	75779772	chr17:75778071-75779772	0	-	75778071	75778071	8553170	1	1701,	0,
#Partially deleted in new
chr17	75778249	75779758	chr17:75778249-75779758	1	-	75778590	75779174	789624	4	474,81,138,102,	0,633,797,1407,
#Partially deleted in new
chr17	75778324	75779759	chr17:75778324-75779759	1	-	75778715	75779174	0	4	399,143,138,103,	0,496,722,1332,
#Partially deleted in new
chr17	75778452	75779766	chr17:75778452-75779766	0	-	75778452	75778452	8553170	2	732,110,	0,1204,
#Partially deleted in new
chr17	75778566	75779286	chr17:75778566-75779286	1	-	75778594	75779174	0	3	157,154,240,	0,243,480,
#Partially deleted in new
chr17	75778573	75779780	chr17:75778573-75779780	1	-	75778594	75779174	0	4	150,154,138,134,	0,236,473,1073,
#Partially deleted in new
chr17	75778575	75785486	chr17:75778575-75785486	3	-	75778594	75779174	0	4	148,154,138,111,	0,234,471,6800,
#Partially deleted in new
chr17	75778609	75779603	chr17:75778609-75779603	0	-	75778609	75779174	789624	4	114,154,138,62,	0,200,437,932,
#Partially deleted in new
chr17	75778637	75779778	chr17:75778637-75779778	0	-	75778637	75779174	789624	3	326,138,122,	0,409,1019,
#Partially deleted in new
chr17	75778646	75779779	chr17:75778646-75779779	0	-	75778646	75778646	8553170	3	77,375,123,	0,163,1010,
#Partially deleted in new
chr17	75783106	75785893	chr17:75783106-75785893	0	-	75783106	75783106	8553170	1	2787,	0,
#Partially deleted in new
chr17	75784520	75784607	chr17:75784520-75784607	3	-	75784520	75784520	5263520	1	87,	0,
#Partially deleted in new
chr17	75784770	75825799	chr17:75784770-75825799	3	+	75784880	75824417	789624	16	214,210,177,131,136,118,85,143,201,66,175,102,189,182,258,1538,	0,24989,27341,27684,28307,28990,30398,31999,32555,33332,33871,34913,35149,37706,38494,39491,
#Partially deleted in new
chr17	75784841	75792165	chr17:75784841-75792165	0	+	75784841	75784841	8553170	2	143,406,	0,6918,
#Partially deleted in new
chr17	75784848	75794124	chr17:75784848-75794124	0	+	75784880	75792322	789624	3	136,166,682,	0,7464,8594,
#Partially deleted in new
chr17	75784854	75794198	chr17:75784854-75794198	0	+	75784880	75791775	789624	4	130,260,166,756,	0,6905,7458,8588,
#Partially deleted in new
chr17	75784861	75812319	chr17:75784861-75812319	0	+	75784880	75808969	789624	4	123,92,210,208,	0,24086,24898,27250,
#Deleted in new
chr17	75791770	75792636	chr17:75791770-75792636	0	+	75791770	75791770	8553170	2	249,324,	0,542,
#Partially deleted in new
chr17	75812147	75815221	chr17:75812147-75815221	0	+	75812147	75812355	789624	5	213,131,136,118,53,	0,307,930,1613,3021,
#Deleted in new
chr17	75818814	75820055	chr17:75818814-75820055	3	-	75818814	75818814	8553170	2	416,474,	0,767,
#Partially deleted in new
chr17	75819738	75824329	chr17:75819738-75824329	0	+	75819738	75824329	789624	5	47,189,98,258,68,	0,181,2822,3526,4523,
#Partially deleted in new
chr17	75827224	75844717	chr17:75827224-75844717	3	-	75827964	75844337	789624	32	862,197,124,121,84,72,106,80,69,207,99,144,121,131,52,98,57,91,125,118,104,93,105,70,69,45,181,67,60,108,36,497,	0,1562,2803,3137,3353,3873,4018,5741,6850,7100,7393,7695,8184,8422,8630,8787,8975,9114,9347,9576,12614,12793,13000,13282,13537,13732,15208,15632,15789,15934,16259,16996,
#Partially deleted in new
chr17	75827224	75830147	chr17:75827224-75830147	0	-	75827964	75830147	789624	4	221,130,197,120,	0,732,1562,2803,
#Partially deleted in new
chr17	75827263	75844350	chr17:75827263-75844350	1	-	75827469	75844337	789624	33	395,89,197,124,121,84,72,106,80,69,207,99,144,121,131,52,98,57,91,125,118,104,93,105,70,69,45,181,67,60,108,36,130,	0,734,1523,2764,3098,3314,3834,3979,5702,6811,7061,7354,7656,8145,8383,8591,8748,8936,9075,9308,9537,12575,12754,12961,13243,13498,13693,15169,15593,15750,15895,16220,16957,
#Partially deleted in new
chr17	75827956	75830437	chr17:75827956-75830437	0	-	75828852	75830437	789624	3	130,197,76,	0,830,2405,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	75829661	75830661	chr17:75829661-75830661	0	-	75829661	75829661	8553170	3	490,121,84,	0,700,916,
#Partially deleted in new
chr17	75831294	75833269	chr17:75831294-75833269	0	-	75831294	75831294	8553170	3	54,80,77,	0,1671,1898,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr17	75831300	75844418	chr17:75831300-75844418	0	-	75831300	75831300	8553170	23	1745,69,207,99,144,121,131,52,98,57,91,125,118,491,70,69,45,181,67,60,108,36,198,	0,2774,3024,3317,3619,4108,4346,4554,4711,4899,5038,5271,5500,8538,9206,9461,9656,11132,11556,11713,11858,12183,12920,
#Deleted in new
chr17	75834324	75835272	chr17:75834324-75835272	0	-	75834324	75834324	8553170	3	207,99,353,	0,293,595,
#Partially deleted in new
chr17	75835418	75844360	chr17:75835418-75844360	0	-	75835418	75844337	789624	6	111,131,52,98,57,140,	0,228,436,593,781,8802,
#Partially deleted in new
chr17	75835716	75840304	chr17:75835716-75840304	0	-	75836403	75840304	789624	10	61,52,98,57,91,22,118,104,93,80,	0,138,295,483,622,855,1084,4122,4301,4508,
#Partially deleted in new
chr17	75839846	75843744	chr17:75839846-75843744	0	-	75839846	75839846	8553170	12	96,93,143,70,69,45,181,67,60,108,36,82,	0,171,378,660,915,1110,2586,3010,3167,3312,3637,3816,
#Partially deleted in new
chr17	75840017	75844334	chr17:75840017-75844334	0	-	75840017	75844334	789624	11	93,105,70,69,45,181,67,60,90,36,114,	0,207,489,744,939,2415,2839,2996,3141,3466,4203,
#Partially deleted in new
chr17	75840224	75843769	chr17:75840224-75843769	0	-	75840224	75843722	789624	10	105,70,69,45,181,67,60,108,36,107,	0,282,537,732,2208,2632,2789,2934,3259,3438,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	75840754	75841156	chr17:75840754-75841156	0	-	75840754	75840754	8553170	2	76,200,	0,202,
#Partially deleted in new
chr17	75840793	75843755	chr17:75840793-75843755	0	-	75840793	75840793	8553170	8	37,76,181,67,60,108,36,93,	0,163,1639,2063,2220,2365,2690,2869,
#Deleted in new
chr17	75842492	75844552	chr17:75842492-75844552	0	-	75842492	75844337	789624	7	121,67,60,108,36,151,32,	0,364,521,666,991,1728,2028,
#Deleted in new
chr17	75843158	75844313	chr17:75843158-75844313	0	-	75843158	75843158	8553170	2	108,830,	0,325,
#Partially deleted in new
chr17	75845698	75855420	chr17:75845698-75855420	1	-	75846733	75855297	789624	8	1089,77,123,135,93,136,109,182,	0,1209,1788,2097,2871,3905,5869,9540,
#Partially deleted in new
chr17	75845698	75855420	chr17:75845698-75855420	1	-	75846746	75855297	789624	7	1089,123,135,93,136,109,182,	0,1788,2097,2871,3905,5869,9540,
#Partially deleted in new
chr17	75845708	75855322	chr17:75845708-75855322	1	-	75846733	75851669	789624	8	1079,77,123,135,93,136,109,143,	0,1199,1778,2087,2861,3895,5859,9471,
#Partially deleted in new
chr17	75845719	75856507	chr17:75845719-75856507	3	-	75846733	75855297	789624	9	1068,77,123,135,93,136,109,238,246,	0,1188,1767,2076,2850,3884,5848,9519,10542,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	75845743	75852350	chr17:75845743-75852350	0	-	75845743	75845743	8553170	4	1044,1755,136,783,	0,1164,3860,5824,
#Partially deleted in new
chr17	75845746	75855308	chr17:75845746-75855308	0	-	75846746	75855297	789624	8	288,452,123,135,93,136,109,70,	0,589,1740,2049,2823,3857,5821,9492,
#Partially deleted in new
chr17	75845771	75855306	chr17:75845771-75855306	1	-	75846733	75855297	789624	8	1016,77,111,135,93,136,109,68,	0,1136,1715,2024,2798,3832,5796,9467,
#Deleted in new
chr17	75845836	75848662	chr17:75845836-75848662	0	-	75845895	75848662	789624	6	198,50,77,123,135,93,	0,901,1071,1650,1959,2733,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	75846322	75855309	chr17:75846322-75855309	0	-	75852771	75855297	789624	9	465,77,123,135,93,136,109,165,71,	0,585,1164,1473,2247,3281,5245,6333,8916,
#Partially deleted in new
chr17	75846494	75855335	chr17:75846494-75855335	1	-	75846733	75855297	789624	7	293,77,123,93,136,109,97,	0,413,992,2075,3109,5073,8744,
#Deleted in new
chr17	75846772	75848327	chr17:75846772-75848327	0	-	75846772	75846772	8553170	4	15,77,123,532,	0,135,714,1023,
#Partially deleted in new
chr17	75847099	75855335	chr17:75847099-75855335	0	-	75847099	75847099	8553170	5	510,135,136,109,97,	0,696,2504,4468,8139,
#Partially deleted in new
chr17	75847486	75855204	chr17:75847486-75855204	0	-	75847486	75849709	789624	5	123,135,93,136,81,	0,309,1083,2117,7637,
#Partially deleted in new
chr17	75847559	75855316	chr17:75847559-75855316	0	-	75847559	75849679	789624	5	38,135,93,136,78,	0,236,1010,2044,7679,
#Partially deleted in new
chr17	75847574	75855225	chr17:75847574-75855225	0	-	75847574	75851669	789624	6	35,135,93,136,109,102,	0,221,995,2029,3993,7549,
#Partially deleted in new
chr17	75848506	75855335	chr17:75848506-75855335	0	-	75848506	75848506	8553170	4	156,136,109,156,	0,1097,3061,6673,
#Partially deleted in new
chr17	75848781	75855309	chr17:75848781-75855309	0	-	75848781	75848781	8553170	4	257,136,109,71,	0,822,2786,6457,
#Partially deleted in new
chr17	75849356	75855337	chr17:75849356-75855337	0	-	75849356	75849356	8553170	3	383,109,99,	0,2211,5882,
#Partially deleted in new
chr17	75851199	75855335	chr17:75851199-75855335	0	-	75851199	75851199	8553170	2	477,97,	0,4039,
#Deleted in new
chr17	75874160	75878575	chr17:75874160-75878575	3	-	75874482	75878548	789624	6	963,75,199,231,96,702,	0,1239,1740,2101,2557,3713,
#Deleted in new
chr17	75874163	75874892	chr17:75874163-75874892	0	-	75874207	75874892	789624	2	413,182,	0,547,
#Deleted in new
chr17	75874163	75878196	chr17:75874163-75878196	0	-	75876791	75878196	789624	6	960,75,199,231,96,346,	0,1236,1737,2098,2554,3687,
#Deleted in new
chr17	75874522	75875591	chr17:75874522-75875591	0	-	75874522	75874522	8553170	2	601,192,	0,877,
#Deleted in new
chr17	75875840	75876394	chr17:75875840-75876394	0	-	75875840	75875840	8553170	2	259,133,	0,421,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	75876371	75879546	chr17:75876371-75879546	3	+	75876371	75876371	8553170	1	3175,	0,
#Deleted in new
chr17	75876433	75878213	chr17:75876433-75878213	0	-	75876433	75876433	8553170	2	380,340,	0,1440,
#Deleted in new
chr17	75876434	75877264	chr17:75876434-75877264	0	-	75876434	75876774	789624	2	58,547,	0,283,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	75880334	75892303	chr17:75880334-75892303	0	-	75880566	75892303	789624	5	295,71,66,175,37,	0,10942,11478,11676,11932,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	75880443	75892149	chr17:75880443-75892149	0	-	75880566	75892149	789624	3	186,71,139,	0,10833,11567,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	75888959	75897003	chr17:75888959-75897003	3	-	75890778	75896937	789624	6	2388,66,175,234,96,480,	0,2853,3051,3307,3795,7564,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	75889852	75896050	chr17:75889852-75896050	0	-	75889852	75889852	8553170	5	1495,175,234,96,49,	0,2158,2414,2902,6149,
#Partially deleted in new
chr17	75891022	75896558	chr17:75891022-75896558	0	-	75891022	75896558	789624	5	325,175,234,96,35,	0,988,1244,1732,5501,
#Partially deleted in new
chr17	75891179	75896911	chr17:75891179-75896911	0	-	75891332	75896911	789624	4	168,234,96,388,	0,1087,1575,5344,
#Partially deleted in new
chr17	75892582	75896640	chr17:75892582-75896640	0	-	75892582	75892582	8553170	2	268,117,	0,3941,
#Partially deleted in new
chr17	75897059	75900148	chr17:75897059-75900148	3	+	75897059	75897059	8553170	3	967,111,341,	0,2196,2748,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	75898642	75905413	chr17:75898642-75905413	3	-	75898849	75904875	0	9	344,137,159,46,73,209,135,180,605,	0,515,873,2339,2558,3069,3377,5897,6166,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	75898643	75899581	chr17:75898643-75899581	0	-	75898643	75898643	8553170	2	343,424,	0,514,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	75898644	75909817	chr17:75898644-75909817	0	-	75909589	75909817	789624	12	342,137,159,46,73,209,135,92,180,87,76,350,	0,513,871,2337,2556,3067,3375,5577,5895,7013,9476,10823,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	75898950	75900473	chr17:75898950-75900473	0	-	75898950	75898950	8553170	4	36,137,159,166,	0,207,565,1357,
#Partially deleted in new
chr17	75898950	75930129	chr17:75898950-75930129	0	-	75898950	75898950	8553170	32	36,137,159,46,73,205,135,180,123,116,118,138,177,103,123,111,140,108,207,101,156,59,89,152,456,100,134,139,120,78,118,133,	0,207,565,2031,2250,2761,3069,5589,10623,13241,14751,14962,15171,15879,16066,18781,18980,19211,20717,21056,21323,22293,22521,22994,24235,26396,27079,27337,27807,28504,29125,31046,
#Partially deleted in new
chr17	75898951	75899868	chr17:75898951-75899868	0	-	75898951	75898951	8553170	3	35,137,353,	0,206,564,
#Partially deleted in new
chr17	75899157	75901424	chr17:75899157-75901424	0	-	75899157	75899157	8553170	4	137,159,46,224,	0,358,1824,2043,
#Partially deleted in new
chr17	75899158	75900924	chr17:75899158-75900924	0	-	75899158	75899158	8553170	3	136,159,151,	0,357,1615,
#Partially deleted in new
chr17	75900794	75901517	chr17:75900794-75901517	0	-	75900794	75900794	8553170	2	233,317,	0,406,
#Partially deleted in new
chr17	75900811	75904838	chr17:75900811-75904838	0	-	75900811	75900811	8553170	6	216,73,209,135,180,30,	0,389,900,1208,3728,3997,
#Partially deleted in new
chr17	75901182	75904871	chr17:75901182-75904871	0	-	75901182	75901182	8553170	4	738,135,180,63,	0,837,3357,3626,
#Partially deleted in new
chr17	75901236	75904859	chr17:75901236-75904859	0	-	75901236	75901236	8553170	3	684,135,51,	0,783,3572,
#Partially deleted in new
chr17	75901241	75904878	chr17:75901241-75904878	0	-	75901241	75901241	8553170	5	32,209,135,134,70,	0,470,778,3298,3567,
#Partially deleted in new
chr17	75901554	75904858	chr17:75901554-75904858	0	-	75901554	75901554	8553170	4	362,135,180,50,	0,465,2985,3254,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	75901659	75902287	chr17:75901659-75902287	0	-	75901659	75901659	8553170	2	261,268,	0,360,
#Partially deleted in new
chr17	75901743	75904882	chr17:75901743-75904882	0	-	75901743	75901743	8553170	4	177,135,494,74,	0,276,2482,3065,
#Partially deleted in new
chr17	75901890	75904901	chr17:75901890-75904901	0	-	75901890	75901890	8553170	4	26,135,498,93,	0,129,2331,2918,
#Deleted in new
chr17	75904243	75905093	chr17:75904243-75905093	0	-	75904243	75904243	8553170	3	70,180,285,	0,296,565,
#Partially deleted in new
chr17	75904663	75913729	chr17:75904663-75913729	3	-	75909589	75913729	789624	4	56,350,116,28,	0,4804,7528,9038,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr17	75909573	75941038	chr17:75909573-75941038	1	-	75910722	75938149	789624	29	1233,116,118,138,174,186,123,119,140,108,207,101,156,59,89,102,456,100,134,139,120,78,118,51,61,94,28,86,191,	0,2618,4128,4339,4548,5173,5443,8158,8357,8588,10094,10433,10700,11670,11898,12371,13612,15773,16456,16714,17184,17881,18502,20423,21655,23421,27992,28573,31274,
#Partially deleted in new
chr17	75909580	75913780	chr17:75909580-75913780	0	-	75910722	75913780	789624	4	237,114,116,79,	0,1112,2611,4121,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr17	75909843	75931289	chr17:75909843-75931289	0	-	75910722	75931289	789624	25	963,116,118,138,177,186,123,119,140,108,207,101,156,59,89,102,453,100,134,139,120,78,118,51,61,	0,2348,3858,4069,4278,4903,5173,7888,8087,8318,9824,10163,10430,11400,11628,12101,13342,15503,16186,16444,16914,17611,18232,20153,21385,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr17	75909843	75941140	chr17:75909843-75941140	0	-	75909843	75909843	8553170	28	963,116,118,138,171,103,123,119,140,108,207,423,59,89,102,456,100,134,139,120,78,118,51,61,94,28,86,37,	0,2348,3858,4069,4278,4986,5173,7888,8087,8318,9824,10163,11400,11628,12101,13342,15503,16186,16444,16914,17611,18232,20153,21385,23151,27722,28303,31260,
#Partially deleted in new
chr17	75910722	75937593	chr17:75910722-75937593	1	-	75910722	75937593	789624	28	84,116,118,138,177,186,123,119,140,108,207,101,156,59,89,102,456,100,134,139,120,78,118,51,61,94,42,28,	0,1469,2979,3190,3399,4024,4294,7009,7208,7439,8945,9284,9551,10521,10749,11222,12463,14624,15307,15565,16035,16732,17353,19274,20506,22272,24909,26843,
#Partially deleted in new
chr17	75910722	75940943	chr17:75910722-75940943	3	-	75910722	75938149	789624	30	84,116,118,138,177,186,123,119,140,108,207,101,156,59,89,102,456,100,134,139,120,78,118,51,61,94,42,28,86,96,	0,1469,2979,3190,3399,4024,4294,7009,7208,7439,8945,9284,9551,10521,10749,11222,12463,14624,15307,15565,16035,16732,17353,19274,20506,22272,24909,26843,27424,30125,
#Partially deleted in new
chr17	75912190	75917761	chr17:75912190-75917761	0	-	75914287	75917761	789624	6	117,118,386,103,123,30,	0,1511,1722,2639,2826,5541,
#Deleted in new
chr17	75913478	75914140	chr17:75913478-75914140	0	-	75913478	75913478	8553170	2	572,19,	0,643,
#Deleted in new
chr17	75914034	75915043	chr17:75914034-75915043	0	-	75914034	75914034	8553170	3	16,811,27,	0,87,982,
#Deleted in new
chr17	75920272	75923473	chr17:75920272-75923473	0	-	75921549	75923473	789624	5	157,59,89,152,288,	0,971,1199,1672,2913,
#Partially deleted in new
chr17	75937711	75940947	chr17:75937711-75940947	1	-	75937996	75938149	789624	2	521,100,	0,3136,
#Partially deleted in new
chr17	75938172	75941056	chr17:75938172-75941056	0	-	75938172	75938172	8553170	3	60,65,462,	0,1645,2422,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	75941506	75979363	chr17:75941506-75979363	1	-	75946747	75979073	789624	14	5289,207,144,106,180,191,163,170,116,120,108,161,160,399,	0,6744,7710,7988,8211,9267,9908,11944,14059,14321,15952,18708,37027,37458,
#Partially deleted in new
chr17	75942595	75949532	chr17:75942595-75949532	0	-	75942840	75949532	789624	4	317,207,144,38,	0,5655,6621,6899,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	75942877	75949359	chr17:75942877-75949359	0	-	75946747	75949359	789624	4	336,89,207,143,	0,3829,5373,6339,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	75942878	75943576	chr17:75942878-75943576	0	-	75942878	75942878	8553170	2	222,166,	0,532,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	75943831	75945142	chr17:75943831-75945142	3	+	75943831	75943831	8553170	2	162,68,	0,1243,
#Partially deleted in new
chr17	75946463	75979073	chr17:75946463-75979073	0	-	75978857	75979073	789624	14	332,207,144,106,180,191,163,170,116,120,108,161,160,283,	0,1787,2753,3031,3254,4310,4951,6987,9102,9364,10995,13751,32070,32327,
#Partially deleted in new
chr17	75946529	75979128	chr17:75946529-75979128	0	-	75957485	75979073	789624	15	266,207,144,106,180,191,163,170,116,120,108,161,161,160,164,	0,1721,2687,2965,3188,4244,4885,6921,9036,9298,10929,13685,27095,32004,32435,
#Partially deleted in new
chr17	75946576	75979134	chr17:75946576-75979134	3	-	75946747	75979073	789624	14	219,207,144,106,180,191,163,170,116,120,108,161,160,170,	0,1674,2640,2918,3141,4197,4838,6874,8989,9251,10882,27048,31957,32388,
#Partially deleted in new
chr17	75953248	75955589	chr17:75953248-75955589	0	-	75953248	75953248	8553170	2	372,24,	0,2317,
#Partially deleted in new
chr17	75955860	75979091	chr17:75955860-75979091	0	-	75955860	75955860	8553170	5	87,146,161,160,127,	0,1560,4354,22673,23104,
#Partially deleted in new
chr17	75955907	75979177	chr17:75955907-75979177	0	-	75955907	75979073	789624	4	40,161,160,213,	0,17717,22626,23057,
#Partially deleted in new
chr17	75957514	75979128	chr17:75957514-75979128	0	-	75978857	75979073	789624	3	52,160,338,	0,21019,21276,
#Partially deleted in new
chr17	75973308	75978693	chr17:75973308-75978693	0	-	75973619	75978693	789624	2	477,160,	0,5225,
#Deleted in new
chr17	75978466	75979045	chr17:75978466-75979045	0	-	75978466	75978466	8553170	2	227,81,	0,498,
#Partially deleted in new
chr17	75979219	76000586	chr17:75979219-76000586	3	+	75986192	76000262	0	4	292,98,158,446,	0,6967,12246,20921,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	75979230	76005998	chr17:75979230-76005998	0	+	75979230	75979230	8553170	9	281,98,158,1401,78,121,171,888,701,	0,6956,12235,20910,22643,22791,23017,23280,26067,
#Partially deleted in new
chr17	75979240	76000521	chr17:75979240-76000521	1	+	75986192	76000158	789624	4	271,98,112,381,	0,6946,12225,20900,
#Partially deleted in new
chr17	75979251	76005985	chr17:75979251-76005985	3	+	75986192	76000262	8553170	11	260,98,158,249,130,78,121,171,102,204,688,	0,6935,12214,20889,22160,22622,22770,22996,23259,23943,26046,
#Partially deleted in new
chr17	75979259	76005999	chr17:75979259-76005999	0	+	75979259	75979259	789624	10	252,98,158,1401,78,121,171,102,204,702,	0,6927,12206,20881,22614,22762,22988,23251,23935,26038,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	75979267	75991540	chr17:75979267-75991540	0	+	75986192	75991540	789624	4	244,138,98,75,	0,5313,6919,12198,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	75979270	75991568	chr17:75979270-75991568	0	+	75984910	75991568	789624	4	241,121,98,103,	0,5621,6916,12195,
#Partially deleted in new
chr17	75986136	75991572	chr17:75986136-75991572	0	+	75986136	75986136	8553170	2	148,107,	0,5329,
#Partially deleted in new
chr17	76000905	76005999	chr17:76000905-76005999	3	+	76001425	76005423	0	8	62,130,78,121,171,102,204,702,	0,506,968,1116,1342,1605,2289,4392,
#Deleted in new
chr17	76000905	76002518	chr17:76000905-76002518	0	+	76001425	76002518	789624	6	62,130,78,121,171,8,	0,506,968,1116,1342,1605,
#Partially deleted in new
chr17	76001337	76005999	chr17:76001337-76005999	1	+	76001425	76005423	0	7	204,78,121,171,102,204,702,	0,536,684,910,1173,1857,3960,
#Partially deleted in new
chr17	76001714	76003366	chr17:76001714-76003366	0	+	76001877	76003366	789624	5	237,121,171,102,172,	0,307,533,796,1480,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	76004501	76007441	chr17:76004501-76007441	0	-	76007102	76007441	789624	2	203,382,	0,2558,
#Partially deleted in new
chr17	76006844	76027452	chr17:76006844-76027452	3	-	76007102	76027198	0	22	3699,93,111,84,151,194,139,179,173,98,155,147,126,96,108,162,39,126,127,155,100,352,	0,4731,4927,5161,7581,8071,8382,8605,10894,11316,11601,12069,12683,14623,14829,15022,15344,15568,16447,16655,17176,20256,
#Partially deleted in new
chr17	76007080	76027231	chr17:76007080-76027231	1	-	76007102	76027198	789624	22	3463,93,111,84,151,194,139,179,173,164,155,147,126,96,108,162,39,126,127,155,100,131,	0,4495,4691,4925,7345,7835,8146,8369,10658,11014,11365,11833,12447,14387,14593,14786,15108,15332,16211,16419,16940,20020,
#Partially deleted in new
chr17	76007081	76027231	chr17:76007081-76027231	0	-	76007081	76007081	8553170	20	3462,93,111,84,151,194,139,179,862,147,126,96,108,162,39,126,127,155,100,131,	0,4494,4690,4924,7344,7834,8145,8368,10657,11832,12446,14386,14592,14785,15107,15331,16210,16418,16939,20019,
#Deleted in new
chr17	76011520	76012291	chr17:76011520-76012291	0	-	76011520	76011520	8553170	3	148,111,286,	0,251,485,
#Partially deleted in new
chr17	76038774	76053648	chr17:76038774-76053648	1	-	76039705	76050487	0	9	1159,56,76,130,95,157,65,99,200,	0,1644,2128,5054,6517,7263,9131,11653,14674,
#Partially deleted in new
chr17	76039102	76072653	chr17:76039102-76072653	3	-	76039705	76072491	0	16	831,56,76,130,95,157,65,99,141,83,110,83,196,114,67,346,	0,1316,1800,4726,6189,6935,8803,11325,18300,21205,22007,22389,24873,28114,31275,33205,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	76039103	76041628	chr17:76039103-76041628	0	-	76039103	76039103	8553170	2	830,1210,	0,1315,
#Partially deleted in new
chr17	76039105	76072507	chr17:76039105-76072507	1	-	76039705	76072491	0	15	828,56,76,130,95,157,65,99,141,83,110,83,196,67,200,	0,1313,1797,4723,6186,6932,8800,11322,18297,21202,22004,22386,24870,31272,33202,
#Partially deleted in new
chr17	76039105	76053656	chr17:76039105-76053656	0	-	76039105	76039105	8553170	9	828,56,76,130,95,157,65,99,208,	0,1313,1797,4723,6186,6932,8800,11322,14343,
#Partially deleted in new
chr17	76039550	76072497	chr17:76039550-76072497	0	-	76067312	76072491	789624	15	383,56,76,130,95,157,65,99,141,83,110,83,196,114,153,	0,868,1352,4278,5741,6487,8355,10877,17852,20757,21559,21941,24425,27666,32794,
#Partially deleted in new
chr17	76043374	76046061	chr17:76043374-76046061	0	-	76043374	76043374	8553170	3	584,95,24,	0,1917,2663,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	76044753	76049647	chr17:76044753-76049647	0	-	76044753	76044753	8553170	3	633,157,1742,	0,1284,3152,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	76057396	76060742	chr17:76057396-76060742	0	-	76057396	76057396	8553170	2	147,435,	0,2911,
#Partially deleted in new
chr17	76061149	76064127	chr17:76061149-76064127	0	-	76061149	76061149	8553170	2	425,152,	0,2826,
#Partially deleted in new
chr17	76061174	76064022	chr17:76061174-76064022	0	-	76061174	76061174	8553170	3	45,162,47,	0,317,2801,
#Partially deleted in new
chr17	76064037	76072507	chr17:76064037-76072507	0	-	76070428	76072491	789624	4	134,114,59,200,	0,3179,6340,8270,
#Partially deleted in new
chr17	76067312	76072491	chr17:76067312-76072491	1	-	76067312	76072491	789624	2	18,147,	0,5032,
#Partially deleted in new
chr17	76071960	76079778	chr17:76071960-76079778	0	+	76071960	76071960	8553170	2	216,340,	0,7478,
#Deleted in new
chr17	76074793	76077541	chr17:76074793-76077541	3	+	76074883	76077431	789624	2	458,906,	0,1842,
#Deleted in new
chr17	76079181	76082666	chr17:76079181-76082666	3	+	76079264	76082653	789624	9	180,125,45,107,170,125,211,168,204,	0,257,520,706,1073,2096,2363,2700,3281,
#Deleted in new
chr17	76079181	76082804	chr17:76079181-76082804	0	+	76079264	76080681	789624	9	180,125,45,107,864,125,211,168,342,	0,257,520,706,1073,2096,2363,2700,3281,
#Deleted in new
chr17	76079181	76080046	chr17:76079181-76080046	0	+	76079181	76079181	8553170	4	180,125,45,159,	0,257,520,706,
#Deleted in new
chr17	76079227	76082666	chr17:76079227-76082666	0	+	76079264	76080898	789624	7	134,125,379,125,156,168,204,	0,211,1512,2050,2372,2654,3235,
#Deleted in new
chr17	76081015	76083666	chr17:76081015-76083666	0	+	76081015	76081015	8553170	1	2651,	0,
#Partially deleted in new
chr17	76081016	76103695	chr17:76081016-76103695	3	-	76083647	76103692	789624	18	2734,134,42,64,96,121,66,67,63,99,153,146,168,223,106,185,66,63,	0,2989,3231,3500,4297,4660,5063,6637,7043,7447,7754,8158,13397,16779,20254,20662,22344,22616,
#Deleted in new
chr17	76081016	76083014	chr17:76081016-76083014	0	-	76081016	76081016	8553170	2	230,123,	0,1875,
#Deleted in new
chr17	76081017	76084716	chr17:76081017-76084716	0	-	76081017	76081017	8553170	3	2733,134,469,	0,2988,3230,
#Partially deleted in new
chr17	76081017	76103758	chr17:76081017-76103758	1	-	76083647	76103692	789624	19	2733,134,42,64,96,121,66,67,63,99,153,146,93,168,223,106,185,66,126,	0,2988,3230,3499,4296,4659,5062,6636,7042,7446,7753,8157,10125,13396,16778,20253,20661,22343,22615,
#Partially deleted in new
chr17	76082390	76103746	chr17:76082390-76103746	1	-	76083647	76103692	789624	20	1360,134,42,64,96,121,66,67,63,99,153,146,153,93,168,223,106,185,66,114,	0,1615,1857,2126,2923,3286,3689,5263,5669,6073,6380,6784,7938,8752,12023,15405,18880,19288,20970,21242,
#Partially deleted in new
chr17	76082391	76103695	chr17:76082391-76103695	1	-	76083647	76103363	789624	20	1359,134,42,64,96,121,66,39,67,63,99,153,146,93,168,223,106,185,66,63,	0,1614,1856,2125,2922,3285,3688,4462,5262,5668,6072,6379,6783,8751,12022,15404,18879,19287,20969,21241,
#Partially deleted in new
chr17	76083518	76103523	chr17:76083518-76103523	1	-	76083647	76103363	789624	19	232,134,42,64,96,121,66,39,67,63,99,153,146,93,168,223,106,185,163,	0,487,729,998,1795,2158,2561,3335,4135,4541,4945,5252,5656,7624,10895,14277,17752,18160,19842,
#Partially deleted in new
chr17	76083575	76103746	chr17:76083575-76103746	1	-	76083647	76103692	789624	19	175,134,64,96,121,66,67,63,99,153,146,69,93,168,223,106,185,66,114,	0,430,941,1738,2101,2504,4078,4484,4888,5195,5599,6753,7567,10838,14220,17695,18103,19785,20057,
#Partially deleted in new
chr17	76083576	76101853	chr17:76083576-76101853	0	-	76083647	76101853	789624	16	174,134,42,64,96,121,67,63,99,153,146,93,168,223,106,175,	0,429,671,940,1737,2100,4077,4483,4887,5194,5598,7566,10837,14219,17694,18102,
#Deleted in new
chr17	76083576	76089808	chr17:76083576-76089808	0	-	76083576	76083576	8553170	10	174,134,42,64,96,121,66,909,153,634,	0,429,671,940,1737,2100,2503,4077,5194,5598,
#Partially deleted in new
chr17	76083647	76103692	chr17:76083647-76103692	1	-	76083647	76103692	789624	19	103,134,42,64,96,121,66,67,63,99,153,146,69,168,223,106,185,66,60,	0,358,600,869,1666,2029,2432,4006,4412,4816,5123,5527,6681,10766,14148,17623,18031,19713,19985,
#Partially deleted in new
chr17	76083647	76103692	chr17:76083647-76103692	1	-	76083647	76103692	789624	20	103,134,42,64,96,121,66,67,63,99,153,146,69,93,168,223,106,185,66,60,	0,358,600,869,1666,2029,2432,4006,4412,4816,5123,5527,6681,7495,10766,14148,17623,18031,19713,19985,
#Deleted in new
chr17	76085109	76087708	chr17:76085109-76087708	0	-	76085109	76085109	8553170	4	300,121,66,55,	0,567,970,2544,
#Deleted in new
chr17	76085368	76087941	chr17:76085368-76087941	0	-	76085368	76085368	8553170	5	41,121,66,39,288,	0,308,711,1485,2285,
#Partially deleted in new
chr17	76085676	76094489	chr17:76085676-76094489	0	-	76088897	76094489	789624	7	121,66,67,63,99,153,76,	0,403,1977,2383,2787,3094,8737,
#Deleted in new
chr17	76087276	76088115	chr17:76087276-76088115	0	-	76087276	76087276	8553170	2	444,56,	0,783,
#Deleted in new
chr17	76090307	76091669	chr17:76090307-76091669	3	+	76090307	76090307	8553170	1	1362,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	76092314	76103743	chr17:76092314-76103743	0	-	76092314	76092314	8553170	6	2267,223,106,185,66,111,	0,5481,8956,9364,11046,11318,
#Partially deleted in new
chr17	76094510	76103226	chr17:76094510-76103226	0	-	76094510	76101342	789624	4	71,223,106,143,	0,3285,6760,8573,
#Partially deleted in new
chr17	76097913	76103270	chr17:76097913-76103270	0	-	76097913	76101830	789624	4	105,106,185,187,	0,3357,3765,5170,
#Partially deleted in new
chr17	76097988	76121576	chr17:76097988-76121576	0	-	76097988	76120402	789624	8	30,106,185,66,45,124,115,149,	0,3282,3690,5372,5644,22342,22875,23439,
#Deleted in new
chr17	76098018	76098076	chr17:76098018-76098076	3	-	76098018	76098018	5263520	1	58,	0,
#Partially deleted in new
chr17	76101011	76103734	chr17:76101011-76103734	1	-	76101207	76103692	789624	4	365,185,66,102,	0,667,2349,2621,
#Deleted in new
chr17	76136332	76141299	chr17:76136332-76141299	3	-	76137352	76140395	789624	3	1788,667,186,	0,3565,4781,
#Partially deleted in new
chr17	76140555	76154283	chr17:76140555-76154283	3	+	76140555	76140555	789624	8	125,119,165,143,64,306,656,234,	0,2674,4366,4866,5718,6738,12577,13494,
#Partially deleted in new
chr17	76140580	76153483	chr17:76140580-76153483	0	+	76140580	76140580	8553170	2	100,351,	0,12552,
#Partially deleted in new
chr17	76141515	76153460	chr17:76141515-76153460	0	+	76141515	76141515	8553170	5	89,175,162,102,336,	0,1658,3409,3906,11609,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr17	76142452	76240373	chr17:76142452-76240373	3	-	76145234	76240240	789624	19	2901,111,46,66,173,112,109,239,113,160,72,48,44,67,118,147,89,119,221,	0,9902,11830,12799,13109,13757,15940,16882,19082,19390,20099,22295,23049,24008,24556,25198,31249,69911,97700,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr17	76142464	76240289	chr17:76142464-76240289	1	-	76145234	76240240	8553170	19	2889,111,49,66,173,112,109,239,113,160,72,48,44,67,118,147,89,119,137,	0,9890,11815,12787,13097,13745,15928,16870,19070,19378,20087,22283,23037,23996,24544,25186,31237,69899,97688,
#Partially deleted in new
chr17	76142632	76144734	chr17:76142632-76144734	0	-	76142632	76142632	8553170	2	214,72,	0,2030,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr17	76144339	76240308	chr17:76144339-76240308	1	-	76145234	76240240	789624	18	1014,111,46,173,112,109,239,113,160,72,48,44,67,118,147,89,119,156,	0,8015,9943,11222,11870,14053,14995,17195,17503,18212,20408,21162,22121,22669,23311,29362,68024,95813,
#Partially deleted in new
chr17	76145014	76152583	chr17:76145014-76152583	0	-	76145014	76145014	8553170	2	339,229,	0,7340,
#Partially deleted in new
chr17	76145278	76156256	chr17:76145278-76156256	0	-	76147268	76156256	789624	7	75,41,111,46,66,173,47,	0,1990,7076,9004,9973,10283,10931,
#Deleted in new
chr17	76153711	76154643	chr17:76153711-76154643	0	+	76153711	76153711	8553170	3	77,153,306,	0,338,626,
#Deleted in new
chr17	76154099	76154650	chr17:76154099-76154650	0	+	76154099	76154099	8553170	2	103,318,	0,233,
#Partially deleted in new
chr17	76154301	76158523	chr17:76154301-76158523	0	-	76154301	76154301	8553170	5	27,66,173,161,131,	0,950,1260,1908,4091,
#Deleted in new
chr17	76161561	76162145	chr17:76161561-76162145	0	-	76161561	76161561	8553170	2	86,303,	0,281,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	76162760	76167082	chr17:76162760-76167082	0	-	76164735	76167082	789624	4	2035,44,67,74,	0,2741,3700,4248,
#Deleted in new
chr17	76202643	76202796	chr17:76202643-76202796	7	-	76202643	76202643	16724991	1	153,	0,
#Partially deleted in new
chr17	76211876	76240301	chr17:76211876-76240301	1	-	76212351	76240240	789624	2	606,149,	0,28276,
#Deleted in new
chr17	76225750	76226806	chr17:76225750-76226806	7	-	76225750	76225750	16724991	1	1056,	0,
#Partially deleted in new
chr17	76265201	76271299	chr17:76265201-76271299	3	+	76265505	76270505	0	3	424,63,1106,	0,705,4992,
#Partially deleted in new
chr17	76265370	76270383	chr17:76265370-76270383	0	+	76265966	76270383	789624	3	33,63,190,	0,536,4823,
#Partially deleted in new
chr17	76265702	76270586	chr17:76265702-76270586	1	+	76265966	76270505	789624	2	267,393,	0,4491,
#Partially deleted in new
chr17	76274048	76307998	chr17:76274048-76307998	1	-	76274235	76307998	789624	19	195,129,88,148,201,102,66,122,165,75,123,252,115,98,86,3007,111,60,534,	0,1770,2631,3114,3940,4992,5314,5984,6238,6605,6782,7815,13143,13751,15943,16966,30366,30833,33416,
#Partially deleted in new
chr17	76274050	76307680	chr17:76274050-76307680	3	-	76274235	76307500	789624	19	193,129,88,148,201,102,66,122,165,75,123,252,115,98,86,3007,111,60,216,	0,1768,2629,3112,3938,4990,5312,5982,6236,6603,6780,7813,13141,13749,15941,16964,30364,30831,33414,
#Partially deleted in new
chr17	76274050	76291252	chr17:76274050-76291252	0	-	76274062	76291252	789624	11	193,129,26,165,75,123,252,115,98,86,238,	0,1768,2629,6236,6603,6780,7813,13141,13749,15941,16964,
#Partially deleted in new
chr17	76274183	76280357	chr17:76274183-76280357	0	-	76274183	76280357	789624	8	60,129,88,201,102,66,122,71,	0,1635,2496,3805,4857,5179,5849,6103,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	76309485	76354149	chr17:76309485-76354149	3	-	76311541	76353703	789624	10	2215,147,71,146,56,116,173,67,53,616,	0,3384,4335,19231,20557,21065,22777,35185,39043,44048,
#Partially deleted in new
chr17	76310933	76354198	chr17:76310933-76354198	1	-	76311541	76332416	789624	10	767,147,71,146,56,116,173,67,53,82,	0,1936,2887,17783,19109,19617,21329,33737,37595,43183,
#Partially deleted in new
chr17	76311385	76313740	chr17:76311385-76313740	0	-	76311385	76311385	8553170	3	315,147,542,	0,1484,1813,
#Partially deleted in new
chr17	76312792	76328864	chr17:76312792-76328864	0	-	76312792	76312792	8553170	3	224,71,148,	0,1028,15924,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	76312792	76314690	chr17:76312792-76314690	0	-	76312792	76312792	8553170	1	1898,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	76312869	76354929	chr17:76312869-76354929	0	-	76312869	76332416	789624	9	147,71,146,56,116,173,67,53,87,	0,951,15847,17173,17681,19393,31801,35659,41973,
#Partially deleted in new
chr17	76313600	76328986	chr17:76313600-76328986	0	-	76313600	76313600	8553170	2	291,270,	0,15116,
#Partially deleted in new
chr17	76313823	76330301	chr17:76313823-76330301	0	-	76313823	76313823	8553170	3	68,146,259,	0,14893,16219,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	76319375	76319473	chr17:76319375-76319473	3	+	76319375	76319375	8553170	1	98,	0,
#Partially deleted in new
chr17	76328716	76353452	chr17:76328716-76353452	0	-	76328716	76332416	789624	7	146,56,116,173,67,53,392,	0,1326,1834,3546,15954,19812,24344,
#Partially deleted in new
chr17	76330482	76353628	chr17:76330482-76353628	0	-	76330482	76330482	8553170	5	184,173,67,53,95,	0,1780,14188,18046,23051,
#Partially deleted in new
chr17	76330551	76384521	chr17:76330551-76384521	0	-	76330551	76332416	789624	5	115,173,67,53,141,	0,1711,14119,17977,53829,
#Partially deleted in new
chr17	76332286	76384484	chr17:76332286-76384484	0	-	76332286	76383889	789624	4	149,67,53,639,	0,12384,16242,51559,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	76337315	76337422	chr17:76337315-76337422	3	+	76337315	76337315	8553170	1	107,	0,
#Deleted in new
chr17	76345760	76346081	chr17:76345760-76346081	7	+	76345760	76345760	16724991	1	321,	0,
#Partially deleted in new
chr17	76376583	76385991	chr17:76376583-76385991	0	+	76385644	76385991	8553170	4	229,101,204,7,	0,720,8867,9401,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	76376660	76387860	chr17:76376660-76387860	1	+	76385644	76387586	0	8	152,341,122,204,153,95,116,1055,	0,2726,4876,8790,9324,9560,9732,10145,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	76381770	76386887	chr17:76381770-76386887	0	+	76385644	76386887	789624	6	208,204,153,95,116,82,	0,3680,4214,4450,4622,5035,
#Deleted in new
chr17	76382976	76387856	chr17:76382976-76387856	0	+	76382976	76382976	8553170	5	553,687,95,116,1051,	0,2474,3244,3416,3829,
#Deleted in new
chr17	76383918	76386469	chr17:76383918-76386469	0	+	76385644	76386469	789624	5	59,204,153,95,77,	0,1532,2066,2302,2474,
#Deleted in new
chr17	76384608	76387860	chr17:76384608-76387860	1	+	76385644	76387586	0	6	198,204,153,95,116,1055,	0,842,1376,1612,1784,2197,
#Deleted in new
chr17	76384620	76387860	chr17:76384620-76387860	1	+	76385644	76387586	0	6	186,204,195,95,116,1055,	0,830,1322,1600,1772,2185,
#Deleted in new
chr17	76384649	76387855	chr17:76384649-76387855	3	+	76385105	76387586	0	6	520,204,153,95,116,1050,	0,801,1335,1571,1743,2156,
#Deleted in new
chr17	76385291	76387857	chr17:76385291-76387857	1	+	76385644	76387586	0	5	363,153,95,116,1052,	0,693,929,1101,1514,
#Deleted in new
chr17	76386022	76386561	chr17:76386022-76386561	0	+	76386022	76386022	8553170	2	115,341,	0,198,
#Partially deleted in new
chr17	76389450	76453206	chr17:76389450-76453206	3	-	76390942	76453141	789624	18	2163,58,204,137,694,90,129,113,155,473,151,110,144,64,98,111,60,482,	0,2305,2459,6274,6677,8348,8804,9021,9386,9998,10696,10990,11560,12613,13151,15755,16062,63274,
#Partially deleted in new
chr17	76389796	76399617	chr17:76389796-76399617	0	-	76390942	76399617	789624	10	1817,58,204,137,694,93,129,113,155,169,	0,1959,2113,5928,6331,8002,8458,8675,9040,9652,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	76395357	76453141	chr17:76395357-76453141	0	-	76395357	76395357	8553170	14	1464,90,129,113,155,473,151,110,144,64,98,111,60,417,	0,2441,2897,3114,3479,4091,4789,5083,5653,6706,7244,9848,10155,57367,
#Deleted in new
chr17	76397807	76399374	chr17:76397807-76399374	0	-	76397807	76397807	8553170	5	81,129,113,155,67,	0,447,664,1029,1500,
#Partially deleted in new
chr17	76399788	76402641	chr17:76399788-76402641	0	-	76399788	76402641	789624	6	133,76,110,144,64,40,	0,433,652,1222,2275,2813,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	76401730	76405232	chr17:76401730-76405232	0	-	76401730	76401730	8553170	3	397,98,27,	0,871,3475,
#Deleted in new
chr17	76430416	76431124	chr17:76430416-76431124	7	-	76430416	76430416	16724991	1	708,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	76453350	76470117	chr17:76453350-76470117	1	+	76466172	76469970	789624	7	432,120,165,350,238,155,453,	0,5896,8965,12532,15321,15822,16314,
#Deleted in new
chr17	76467568	76470117	chr17:76467568-76470117	3	+	76468746	76469970	789624	4	159,238,155,453,	0,1103,1604,2096,
#Deleted in new
chr17	76467717	76470001	chr17:76467717-76470001	0	+	76468746	76469232	789624	4	10,238,211,337,	0,954,1399,1947,
#Deleted in new
chr17	76468609	76469687	chr17:76468609-76469687	0	+	76468632	76469687	789624	3	300,155,23,	0,563,1055,
#Partially deleted in new
chr17	76470890	76477731	chr17:76470890-76477731	0	-	76470890	76470890	8553170	12	1162,420,76,95,64,110,162,75,112,195,119,75,	0,1795,2361,2757,2948,3142,3482,3839,4139,5939,6289,6766,
#Partially deleted in new
chr17	76470895	76501407	chr17:76470895-76501407	3	-	76471632	76481524	789624	19	1157,154,101,76,95,64,110,162,75,112,195,119,129,204,196,209,171,198,55,	0,1790,2109,2356,2752,2943,3137,3477,3834,4134,5934,6284,6761,7910,8186,8837,10479,16816,30457,
#Partially deleted in new
chr17	76471068	76501790	chr17:76471068-76501790	1	-	76471632	76481524	789624	19	984,154,101,76,95,64,110,162,75,112,195,119,129,204,196,122,171,198,332,	0,1617,1936,2183,2579,2770,2964,3304,3661,3961,5761,6111,6588,7737,8013,8664,10306,16643,30390,
#Deleted in new
chr17	76471813	76473075	chr17:76471813-76473075	0	-	76472134	76473075	789624	3	357,154,71,	0,872,1191,
#Partially deleted in new
chr17	76474203	76481547	chr17:76474203-76481547	0	-	76474203	76474203	8553170	10	331,145,112,195,108,140,204,196,122,173,	0,456,826,2626,2976,3442,4602,4878,5529,7171,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	76475922	76481527	chr17:76475922-76481527	0	-	76475922	76475922	8553170	6	1102,119,129,472,122,153,	0,1257,1734,2883,3810,5452,
#Partially deleted in new
chr17	76479081	76501412	chr17:76479081-76501412	0	-	76479081	76481524	789624	6	196,209,171,140,159,60,	0,651,2293,8630,8892,22271,
#Partially deleted in new
chr17	76479145	76501384	chr17:76479145-76501384	0	-	76479145	76479145	8553170	4	132,171,198,32,	0,2229,8566,22207,
#Partially deleted in new
chr17	76479211	76501421	chr17:76479211-76501421	0	-	76479211	76481524	789624	5	66,122,171,140,69,	0,521,2163,8500,22141,
#Partially deleted in new
chr17	76479735	76493202	chr17:76479735-76493202	0	-	76479735	76481524	789624	4	119,171,198,141,	0,1639,7976,13326,
#Partially deleted in new
chr17	76479782	76501423	chr17:76479782-76501423	0	-	76479782	76481524	789624	5	72,171,140,159,71,	0,1592,7929,8191,21570,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	76479785	76481894	chr17:76479785-76481894	0	-	76479785	76481524	789624	2	69,520,	0,1589,
#Partially deleted in new
chr17	76481382	76493154	chr17:76481382-76493154	0	-	76481382	76481524	789624	4	163,198,118,93,	0,6329,6632,11679,
#Partially deleted in new
chr17	76481383	76493154	chr17:76481383-76493154	0	-	76481383	76481524	789624	4	162,140,159,93,	0,6328,6590,11678,
#Partially deleted in new
chr17	76481438	76488178	chr17:76481438-76488178	0	-	76481438	76481524	789624	2	107,467,	0,6273,
#Partially deleted in new
chr17	76481445	76501371	chr17:76481445-76501371	0	-	76481445	76481524	789624	3	100,198,436,	0,6266,19490,
#Partially deleted in new
chr17	76481484	76501415	chr17:76481484-76501415	0	-	76481484	76481524	789624	3	61,421,63,	0,6227,19868,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	76487410	76501415	chr17:76487410-76501415	0	-	76487410	76487410	8553170	2	499,63,	0,13942,
#Partially deleted in new
chr17	76527355	76537905	chr17:76527355-76537905	3	-	76528577	76537542	0	4	1256,164,232,506,	0,3623,4104,10044,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	76527585	76553578	chr17:76527585-76553578	0	+	76527585	76527585	8553170	7	248,69,81,93,568,1843,470,	0,12919,14967,15443,16217,17944,25523,
#Partially deleted in new
chr17	76527788	76545376	chr17:76527788-76545376	0	+	76527788	76527788	789624	5	45,69,81,93,1574,	0,12716,14764,15240,16014,
#Deleted in new
chr17	76528056	76528993	chr17:76528056-76528993	0	-	76528056	76528056	8553170	2	555,287,	0,650,
#Partially deleted in new
chr17	76528281	76537652	chr17:76528281-76537652	1	-	76528305	76537542	789624	3	330,232,253,	0,3178,9118,
#Deleted in new
chr17	76528367	76532065	chr17:76528367-76532065	1	-	76528577	76531639	789624	4	244,164,232,190,	0,2611,3092,3508,
#Partially deleted in new
chr17	76528533	76551175	chr17:76528533-76551175	1	-	76528577	76531639	789624	4	78,164,232,314,	0,2445,2926,22328,
#Deleted in new
chr17	76538063	76543107	chr17:76538063-76543107	0	+	76538063	76538063	8553170	4	444,69,81,79,	0,2441,4489,4965,
#Deleted in new
chr17	76538415	76544370	chr17:76538415-76544370	0	+	76538415	76538415	8553170	4	92,69,93,568,	0,2089,4613,5387,
#Deleted in new
chr17	76540032	76543838	chr17:76540032-76543838	3	+	76540141	76542574	789624	5	183,69,81,93,36,	0,472,2520,2996,3770,
#Deleted in new
chr17	76540089	76543387	chr17:76540089-76543387	1	+	76540141	76542574	789624	4	126,69,81,354,	0,415,2463,2944,
#Deleted in new
chr17	76540470	76545345	chr17:76540470-76545345	0	+	76540470	76540470	8553170	4	103,81,93,1543,	0,2082,2558,3332,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	76540535	76553574	chr17:76540535-76553574	0	+	76540535	76540535	8553170	2	38,466,	0,12573,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	76540548	76553337	chr17:76540548-76553337	0	+	76540548	76540548	8553170	7	25,81,93,130,139,107,229,	0,2004,2480,3254,3683,4981,12560,
#Partially deleted in new
chr17	76540548	76553194	chr17:76540548-76553194	0	+	76540548	76540548	8553170	6	25,81,93,130,107,86,	0,2004,2480,3254,4981,12560,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	76543842	76553578	chr17:76543842-76553578	0	+	76543842	76543842	8553170	4	528,107,236,470,	0,1687,2053,9266,
#Partially deleted in new
chr17	76545667	76557652	chr17:76545667-76557652	3	-	76545667	76545667	8553170	3	247,302,29,	0,5194,11956,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	76546063	76553578	chr17:76546063-76553578	0	+	76546063	76546063	8553170	2	68,470,	0,7045,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	76547289	76553578	chr17:76547289-76553578	0	+	76547289	76547289	8553170	2	83,470,	0,5819,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	76549950	76550826	chr17:76549950-76550826	3	+	76549950	76549950	8553170	2	283,287,	0,589,
#Partially deleted in new
chr17	76550840	76557648	chr17:76550840-76557648	1	-	76550840	76550840	8553170	3	323,126,25,	0,6331,6783,
#Deleted in new
chr17	76551351	76551750	chr17:76551351-76551750	3	+	76551351	76551351	8553170	1	399,	0,
#Partially deleted in new
chr17	76551579	76557683	chr17:76551579-76557683	1	-	76551579	76551579	8553170	2	510,60,	0,6044,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	76551779	76552931	chr17:76551779-76552931	0	-	76551779	76551779	8553170	2	443,95,	0,1057,
#Partially deleted in new
chr17	76557765	76561751	chr17:76557765-76561751	0	+	76557765	76557765	8553170	2	92,464,	0,3522,
#Deleted in new
chr17	76557766	76558460	chr17:76557766-76558460	0	+	76557766	76557766	8553170	2	91,491,	0,203,
#Partially deleted in new
chr17	76557768	76563160	chr17:76557768-76563160	1	+	76557768	76557768	8553170	5	89,227,99,111,42,	0,605,1176,3519,5350,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	76557768	76560433	chr17:76557768-76560433	0	+	76557768	76557768	8553170	1	2665,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	76557769	76565343	chr17:76557769-76565343	0	+	76557769	76557769	789624	3	88,111,2225,	0,3518,5349,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	76557777	76565348	chr17:76557777-76565348	3	+	76557777	76557777	8553170	3	1266,111,2230,	0,3510,5341,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	76557791	76565279	chr17:76557791-76565279	1	+	76557791	76557791	789624	5	66,99,111,364,1307,	0,1153,3496,5327,6181,
#Partially deleted in new
chr17	76558462	76563753	chr17:76558462-76563753	0	+	76558462	76558462	8553170	3	138,111,635,	0,2825,4656,
#Deleted in new
chr17	76558790	76558868	chr17:76558790-76558868	3	+	76558790	76558790	789624	1	78,	0,
#Deleted in new
chr17	76561108	76561192	chr17:76561108-76561192	3	+	76561108	76561108	789624	1	84,	0,
#Deleted in new
chr17	76561633	76561705	chr17:76561633-76561705	3	+	76561633	76561633	789624	1	72,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	76563709	76570544	chr17:76563709-76570544	3	-	76568796	76569648	789624	2	2562,3092,	0,3743,
#Partially deleted in new
chr17	76565378	76586128	chr17:76565378-76586128	3	-	76566103	76585808	0	9	893,100,84,104,139,169,175,61,445,	0,2074,3334,5186,7258,7816,8986,13377,20305,
#Partially deleted in new
chr17	76566105	76570633	chr17:76566105-76570633	0	-	76568867	76570633	789624	4	166,100,201,69,	0,1347,2607,4459,
#Partially deleted in new
chr17	76566132	76573349	chr17:76566132-76573349	0	-	76566132	76573349	789624	5	139,100,104,139,155,	0,1320,4432,6504,7062,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	76568716	76571142	chr17:76568716-76571142	0	-	76568716	76568716	8553170	2	178,578,	0,1848,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	76569791	76571240	chr17:76569791-76571240	3	+	76569791	76569791	8553170	1	1449,	0,
#Partially deleted in new
chr17	76570578	76585856	chr17:76570578-76585856	0	-	76574409	76585808	789624	5	90,139,169,175,173,	0,2058,2616,3786,15105,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	76570897	76585857	chr17:76570897-76585857	0	-	76570897	76570897	8553170	6	26,139,169,175,61,174,	0,1739,2297,3467,7858,14786,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	76570909	76586956	chr17:76570909-76586956	0	-	76570909	76570909	8553170	6	14,139,105,175,61,88,	0,1727,2285,3455,7846,15959,
#Partially deleted in new
chr17	76573341	76586030	chr17:76573341-76586030	0	-	76578798	76585808	789624	5	22,175,61,82,347,	0,1023,5414,7629,12342,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	76574480	76578983	chr17:76574480-76578983	0	-	76574480	76574480	8553170	2	59,228,	0,4275,
#Partially deleted in new
chr17	76595583	76595772	chr17:76595583-76595772	7	-	76595583	76595583	16724991	1	189,	0,
#Partially deleted in new
chr17	76624760	76643786	chr17:76624760-76643786	0	-	76637675	76643638	789624	10	767,100,90,104,139,172,169,700,137,279,	0,1058,1245,1528,1890,2306,2654,4251,12839,18747,
#Partially deleted in new
chr17	76624762	76643838	chr17:76624762-76643838	3	-	76625329	76643638	789624	9	765,100,90,104,139,172,169,700,331,	0,1056,1243,1526,1888,2304,2652,4249,18745,
#Partially deleted in new
chr17	76624762	76643693	chr17:76624762-76643693	0	-	76625903	76643638	789624	8	765,100,90,139,172,169,700,186,	0,1056,1243,1888,2304,2652,4249,18745,
#Deleted in new
chr17	76625124	76626391	chr17:76625124-76626391	0	-	76625903	76626391	789624	4	403,100,90,74,	0,694,881,1193,
#Deleted in new
chr17	76625647	76627112	chr17:76625647-76627112	0	-	76625647	76625647	8553170	3	448,139,46,	0,1003,1419,
#Deleted in new
chr17	76625849	76627167	chr17:76625849-76627167	0	-	76625849	76627167	789624	5	69,45,104,139,101,	0,201,439,801,1217,
#Partially deleted in new
chr17	76626005	76629234	chr17:76626005-76629234	0	-	76626005	76626005	8553170	5	90,104,172,169,223,	0,283,1061,1409,3006,
#Partially deleted in new
chr17	76627097	76643774	chr17:76627097-76643774	0	-	76627097	76627097	8553170	4	175,169,700,267,	0,317,1914,16410,
#Partially deleted in new
chr17	76629394	76643660	chr17:76629394-76643660	0	-	76641891	76643638	789624	3	317,97,153,	0,12413,14113,
#Partially deleted in new
chr17	76633594	76643757	chr17:76633594-76643757	0	-	76633594	76633594	8553170	2	221,250,	0,9913,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	76637470	76643660	chr17:76637470-76643660	1	-	76637675	76643638	789624	2	266,153,	0,6037,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	76656319	76656422	chr17:76656319-76656422	3	+	76656319	76656319	8553170	1	103,	0,
#Partially deleted in new
chr17	76671941	76673658	chr17:76671941-76673658	3	+	76671941	76671941	789624	1	1717,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	76672550	76710955	chr17:76672550-76710955	3	-	76677587	76710946	789624	4	5152,94,64,351,	0,12521,15562,38054,
#Partially deleted in new
chr17	76679568	76711004	chr17:76679568-76711004	1	-	76683893	76710946	789624	5	1311,81,94,64,400,	0,4278,5503,8544,31036,
#Partially deleted in new
chr17	76679568	76711016	chr17:76679568-76711016	1	-	76680866	76710946	789624	4	1311,94,64,412,	0,5503,8544,31036,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	76679570	76690219	chr17:76679570-76690219	1	-	76680866	76688647	789624	3	1309,94,2107,	0,5501,8542,
#Partially deleted in new
chr17	76680533	76688705	chr17:76680533-76688705	1	-	76680866	76685106	789624	4	346,94,64,36,	0,4538,7579,8136,
#Partially deleted in new
chr17	76680616	76709597	chr17:76680616-76709597	1	-	76680866	76685106	789624	4	263,94,64,100,	0,4455,7496,28881,
#Partially deleted in new
chr17	76680776	76688887	chr17:76680776-76688887	1	-	76683893	76685106	789624	5	103,81,94,64,218,	0,3070,4295,7336,7893,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	76703631	76703727	chr17:76703631-76703727	3	-	76703631	76703631	8553170	1	96,	0,
#Partially deleted in new
chr17	76709759	76710045	chr17:76709759-76710045	3	+	76709759	76709759	8553170	1	286,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	76712831	76726679	chr17:76712831-76726679	3	-	76716685	76726475	0	7	3891,128,139,136,287,389,333,	0,5901,7528,8966,10940,12635,13515,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	76712831	76726799	chr17:76712831-76726799	1	-	76720447	76726475	789624	8	3891,128,139,94,136,287,389,453,	0,5901,7528,8431,8966,10940,12635,13515,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	76718445	76726784	chr17:76718445-76726784	0	-	76721284	76726475	789624	7	415,139,89,136,287,389,438,	0,1914,2817,3352,5326,7021,7901,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	76718445	76726784	chr17:76718445-76726784	0	-	76720447	76726475	789624	7	415,139,94,136,287,389,438,	0,1914,2817,3352,5326,7021,7901,
#Partially deleted in new
chr17	76718452	76726590	chr17:76718452-76726590	1	-	76718728	76726475	0	6	408,139,136,287,389,244,	0,1907,3345,5319,7014,7894,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	76718452	76721382	chr17:76718452-76721382	0	-	76718452	76718452	8553170	3	408,139,120,	0,1907,2810,
#Partially deleted in new
chr17	76718499	76726503	chr17:76718499-76726503	1	-	76718613	76726475	789624	5	361,136,287,389,157,	0,3298,5272,6967,7847,
#Partially deleted in new
chr17	76718671	76720637	chr17:76718671-76720637	0	-	76718671	76718671	8553170	2	189,278,	0,1688,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	76721215	76721396	chr17:76721215-76721396	3	-	76721215	76721215	8553170	1	181,	0,
#Partially deleted in new
chr17	76726829	76733516	chr17:76726829-76733516	1	+	76729710	76733411	789624	4	50,105,238,224,	0,2860,6148,6463,
#Partially deleted in new
chr17	76726829	76733879	chr17:76726829-76733879	1	+	76729710	76733686	789624	5	384,105,238,85,359,	0,2860,6148,6463,6691,
#Partially deleted in new
chr17	76726838	76733598	chr17:76726838-76733598	1	+	76733094	76733411	789624	3	41,238,306,	0,6139,6454,
#Partially deleted in new
chr17	76726839	76733564	chr17:76726839-76733564	0	+	76729710	76733564	789624	5	374,105,238,85,44,	0,2850,6138,6453,6681,
#Partially deleted in new
chr17	76726842	76733866	chr17:76726842-76733866	1	+	76729710	76733526	789624	6	37,244,105,238,89,346,	0,127,2847,6135,6450,6678,
#Partially deleted in new
chr17	76726842	76733936	chr17:76726842-76733936	1	+	76729710	76733526	789624	5	336,105,238,89,416,	0,2847,6135,6450,6678,
#Partially deleted in new
chr17	76726849	76733643	chr17:76726849-76733643	0	+	76729710	76733643	789624	5	30,105,238,85,123,	0,2840,6128,6443,6671,
#Partially deleted in new
chr17	76726850	76733738	chr17:76726850-76733738	1	+	76733094	76733686	789624	4	363,238,85,218,	0,6127,6442,6670,
#Partially deleted in new
chr17	76726850	76733880	chr17:76726850-76733880	1	+	76733094	76733526	789624	5	29,209,238,89,360,	0,119,6127,6442,6670,
#Partially deleted in new
chr17	76726853	76733878	chr17:76726853-76733878	1	+	76733094	76733686	789624	4	325,238,85,358,	0,6124,6439,6667,
#Partially deleted in new
chr17	76726867	76733936	chr17:76726867-76733936	3	+	76729710	76733686	789624	5	311,105,238,85,416,	0,2822,6110,6425,6653,
#Partially deleted in new
chr17	76726869	76733758	chr17:76726869-76733758	1	+	76733094	76733686	789624	4	488,238,85,238,	0,6108,6423,6651,
#Partially deleted in new
chr17	76726964	76733686	chr17:76726964-76733686	1	+	76733327	76733686	789624	3	214,85,166,	0,6328,6556,
#Partially deleted in new
chr17	76729691	76733602	chr17:76729691-76733602	0	+	76729691	76729691	8553170	3	103,400,82,	0,3286,3829,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	76732655	76733341	chr17:76732655-76733341	0	+	76733094	76733341	789624	2	560,49,	0,637,
#Partially deleted in new
chr17	76732977	76738522	chr17:76732977-76738522	3	+	76732977	76738346	789624	2	238,241,	0,5304,
#Partially deleted in new
chr17	76734114	76737333	chr17:76734114-76737333	1	-	76736160	76737160	0	2	2350,535,	0,2684,
#Partially deleted in new
chr17	76734118	76737374	chr17:76734118-76737374	3	-	76736160	76737160	0	3	1040,311,576,	0,2035,2680,
#Partially deleted in new
chr17	76734122	76737308	chr17:76734122-76737308	0	-	76736160	76737160	0	4	440,98,311,510,	0,938,2031,2676,
#Partially deleted in new
chr17	76734146	76736555	chr17:76734146-76736555	0	-	76734146	76734146	8553170	3	1012,104,402,	0,1625,2007,
#Partially deleted in new
chr17	76734162	76735661	chr17:76734162-76735661	0	-	76734162	76734162	8553170	2	400,601,	0,898,
#Partially deleted in new
chr17	76734251	76737331	chr17:76734251-76737331	0	-	76736160	76737160	0	5	311,98,104,311,533,	0,809,1520,1902,2547,
#Partially deleted in new
chr17	76734302	76736008	chr17:76734302-76736008	0	-	76734302	76734302	8553170	3	260,98,237,	0,758,1469,
#Partially deleted in new
chr17	76734576	76737331	chr17:76734576-76737331	1	-	76736160	76737160	0	3	582,311,497,	0,1577,2258,
#Partially deleted in new
chr17	76735136	76736154	chr17:76735136-76736154	0	-	76735136	76735136	8553170	2	22,537,	0,481,
#Partially deleted in new
chr17	76735864	76778817	chr17:76735864-76778817	3	+	76738352	76778352	789624	15	164,902,167,56,108,80,97,59,145,41,66,126,175,136,630,	0,325,2417,3073,5092,6104,6312,7533,8457,18182,31521,33881,39132,40541,42323,
#Partially deleted in new
chr17	76736310	76778572	chr17:76736310-76778572	1	+	76738352	76778352	789624	13	2138,56,108,80,97,59,145,41,66,126,175,136,385,	0,2627,4646,5658,5866,7087,8011,17736,31075,33435,38686,40095,41877,
#Partially deleted in new
chr17	76736379	76737331	chr17:76736379-76737331	0	-	76736379	76737160	789624	2	64,497,	0,455,
#Partially deleted in new
chr17	76736404	76737331	chr17:76736404-76737331	0	-	76736404	76737160	789624	2	39,533,	0,394,
#Partially deleted in new
chr17	76736449	76736548	chr17:76736449-76736548	3	-	76736449	76736449	5263520	1	99,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	76736564	76779254	chr17:76736564-76779254	1	+	76738352	76778352	789624	14	527,167,56,108,80,97,59,145,41,66,126,175,136,1067,	0,1717,2373,4392,5404,5612,6833,7757,17482,30821,33181,38432,39841,41623,
#Partially deleted in new
chr17	76736852	76738488	chr17:76736852-76738488	1	+	76738352	76738478	789624	2	239,207,	0,1429,
#Partially deleted in new
chr17	76737386	76738527	chr17:76737386-76738527	1	+	76738352	76738478	789624	1	1141,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	76737500	76779254	chr17:76737500-76779254	1	+	76738352	76778352	789624	12	665,167,56,108,80,145,41,66,126,175,136,1067,	0,781,1437,3456,4468,6821,16546,29885,32245,37496,38905,40687,
#Partially deleted in new
chr17	76737678	76740990	chr17:76737678-76740990	0	+	76738352	76740990	789624	4	320,167,56,34,	0,603,1259,3278,
#Partially deleted in new
chr17	76737678	76742048	chr17:76737678-76742048	0	+	76738352	76742048	789624	5	487,167,56,108,80,	0,603,1259,3278,4290,
#Partially deleted in new
chr17	76737694	76778727	chr17:76737694-76778727	1	+	76738352	76778352	789624	12	282,167,56,108,80,145,41,66,126,175,136,540,	0,587,1243,3262,4274,6627,16352,29691,32051,37302,38711,40493,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr17	76737700	76779286	chr17:76737700-76779286	1	+	76738352	76778352	789624	14	183,167,56,108,80,97,59,145,41,66,126,175,136,1099,	0,581,1237,3256,4268,4476,5697,6621,16346,29685,32045,37296,38705,40487,
#Partially deleted in new
chr17	76738070	76778727	chr17:76738070-76778727	1	+	76738352	76778352	789624	14	95,167,56,108,80,97,59,145,41,66,126,175,136,540,	0,211,867,2886,3898,4106,5327,6251,15976,29315,31675,36926,38335,40117,
#Partially deleted in new
chr17	76738095	76744466	chr17:76738095-76744466	0	+	76738352	76742206	789624	8	70,167,56,108,55,97,59,145,	0,186,842,2861,3898,4081,5302,6226,
#Partially deleted in new
chr17	76738283	76769871	chr17:76738283-76769871	0	+	76738352	76742222	789624	9	165,56,108,30,97,145,41,66,126,	0,654,2673,3735,3893,6038,15763,29102,31462,
#Partially deleted in new
chr17	76738409	76775081	chr17:76738409-76775081	0	+	76738409	76744328	789624	10	39,56,108,80,97,145,41,66,126,85,	0,528,2547,3559,3767,5912,15637,28976,31336,36587,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	76742190	76769840	chr17:76742190-76769840	0	+	76742190	76754066	789624	7	83,59,145,47,41,66,95,	0,1207,2131,3202,11856,25195,27555,
#Partially deleted in new
chr17	76747930	76775090	chr17:76747930-76775090	0	+	76747930	76747930	8553170	5	131,158,66,126,94,	0,6116,19455,21815,27066,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	76752911	76753015	chr17:76752911-76753015	3	+	76752911	76752911	8553170	1	104,	0,
#Partially deleted in new
chr17	76767002	76778265	chr17:76767002-76778265	0	+	76767002	76767002	8553170	5	449,126,175,136,78,	0,2743,7994,9403,11185,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	76767440	76781449	chr17:76767440-76781449	0	+	76767440	76781226	789624	5	11,126,175,136,409,	0,2305,7556,8965,13600,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	76769190	76775160	chr17:76769190-76775160	0	+	76769190	76769190	8553170	2	681,164,	0,5806,
#Partially deleted in new
chr17	76773096	76778338	chr17:76773096-76778338	0	+	76773096	76773096	8553170	4	255,175,136,151,	0,1900,3309,5091,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	76799043	76807102	chr17:76799043-76807102	3	+	76799043	76799043	789624	3	501,1769,815,	0,5141,7244,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	76850175	76861830	chr17:76850175-76861830	3	+	76850175	76850175	8553170	2	498,355,	0,11300,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	76856165	76861834	chr17:76856165-76861834	1	+	76856165	76856165	789624	3	99,89,359,	0,2101,5310,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	76856168	76861836	chr17:76856168-76861836	0	+	76856168	76856168	789624	2	96,361,	0,5307,
#Partially deleted in new
chr17	76868455	76950377	chr17:76868455-76950377	3	+	76869029	76948838	789624	17	642,113,148,116,74,171,165,170,132,134,131,156,147,117,75,257,1738,	0,4395,13695,34099,34847,35796,36713,37562,56510,58141,64189,69532,71946,72276,77920,79374,80184,
#Partially deleted in new
chr17	76868455	76950377	chr17:76868455-76950377	1	+	76869029	76948838	789624	18	642,113,148,116,74,171,165,170,132,134,131,6,156,147,117,75,257,1738,	0,4395,13695,34099,34847,35796,36713,37562,56510,58141,64189,64836,69532,71946,72276,77920,79374,80184,
#Partially deleted in new
chr17	76868715	76882527	chr17:76868715-76882527	1	+	76869029	76882302	789624	3	382,113,377,	0,4135,13435,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	76868823	76914098	chr17:76868823-76914098	0	+	76868823	76868823	8553170	9	274,113,148,116,74,171,165,170,430,	0,4027,13327,33731,34479,35428,36345,37194,44845,
#Partially deleted in new
chr17	76872646	76950382	chr17:76872646-76950382	1	+	76872749	76948838	789624	16	317,148,116,74,171,165,170,132,134,131,156,147,117,75,257,1743,	0,9504,29908,30656,31605,32522,33371,52319,53950,59998,65341,67755,68085,73729,75183,75993,
#Partially deleted in new
chr17	76872710	76949447	chr17:76872710-76949447	0	+	76872749	76938115	789624	15	253,148,116,74,171,165,170,132,134,156,147,117,75,257,808,	0,9440,29844,30592,31541,32458,33307,52255,53886,65277,67691,68021,73665,75119,75929,
#Deleted in new
chr17	76923849	76925020	chr17:76923849-76925020	0	+	76923849	76923849	8553170	2	574,55,	0,1116,
#Partially deleted in new
chr17	76943947	76948896	chr17:76943947-76948896	0	+	76943947	76943947	8553170	4	315,75,257,257,	0,2428,3882,4692,
#Deleted in new
chr17	76946249	76950393	chr17:76946249-76950393	0	+	76946249	76946249	8553170	3	201,257,1754,	0,1580,2390,
#Partially deleted in new
chr17	76950473	76969156	chr17:76950473-76969156	3	-	76950473	76950473	789624	3	86,251,273,	0,13419,18410,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	76957022	76958222	chr17:76957022-76958222	3	-	76957022	76957022	8553170	2	635,87,	0,1113,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	76962891	76969097	chr17:76962891-76969097	1	-	76962891	76962891	789624	3	158,251,214,	0,1001,5992,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	76966284	76969530	chr17:76966284-76969530	3	-	76966284	76966284	8553170	1	3246,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	77014879	77015138	chr17:77014879-77015138	3	+	77014879	77014879	8553170	1	259,	0,
#Partially deleted in new
chr17	77086715	77099174	chr17:77086715-77099174	0	+	77086715	77086715	8553170	4	148,119,104,157,	0,2437,6528,12302,
#Partially deleted in new
chr17	77086715	77099174	chr17:77086715-77099174	0	+	77086715	77086715	8553170	3	148,119,157,	0,2437,12302,
#Partially deleted in new
chr17	77086715	77093762	chr17:77086715-77093762	0	+	77086715	77086715	8553170	3	148,119,519,	0,2437,6528,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	77087709	77094946	chr17:77087709-77094946	1	+	77087709	77087709	8553170	2	1562,1703,	0,5534,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	77088630	77094990	chr17:77088630-77094990	0	+	77088630	77088630	789624	3	319,119,1747,	0,522,4613,
#Deleted in new
chr17	77088630	77089600	chr17:77088630-77089600	0	+	77088630	77088630	8553170	2	52,448,	0,522,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	77088650	77094663	chr17:77088650-77094663	2	+	77088650	77088650	8553170	3	32,119,1420,	0,502,4593,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	77088659	77094780	chr17:77088659-77094780	1	+	77088659	77088659	8553170	4	290,119,724,692,	0,493,4584,5429,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	77088665	77099506	chr17:77088665-77099506	1	+	77088665	77088665	8553170	4	284,119,104,1342,	0,487,4578,9499,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	77088671	77095852	chr17:77088671-77095852	0	+	77088671	77088671	8553170	3	278,119,334,	0,481,6847,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	77088711	77098348	chr17:77088711-77098348	0	+	77088711	77088711	8553170	4	238,119,104,131,	0,441,4532,9506,
#Partially deleted in new
chr17	77088748	77216802	chr17:77088748-77216802	3	+	77143596	77216564	789624	20	201,119,104,105,93,150,132,129,235,110,190,89,71,172,135,135,252,179,102,254,	0,404,4495,53897,54818,102054,102432,104672,105928,107453,111735,114821,116527,117480,117979,120593,123201,124565,125169,127800,
#Partially deleted in new
chr17	77088748	77099196	chr17:77088748-77099196	0	+	77088748	77088748	8553170	4	201,119,104,179,	0,404,4495,10269,
#Partially deleted in new
chr17	77088748	77143638	chr17:77088748-77143638	0	+	77143596	77143638	789624	5	237,119,104,105,72,	0,404,4495,53897,54818,
#Partially deleted in new
chr17	77088748	77099196	chr17:77088748-77099196	0	+	77088748	77088748	8553170	3	523,104,179,	0,4495,10269,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	77088748	77094983	chr17:77088748-77094983	0	+	77088748	77088748	8553170	3	201,119,914,	0,404,5321,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	77088748	77094983	chr17:77088748-77094983	0	+	77088748	77088748	8553170	4	201,119,104,914,	0,404,4495,5321,
#Partially deleted in new
chr17	77088748	77206395	chr17:77088748-77206395	0	+	77143596	77206395	789624	13	201,119,105,93,150,132,129,235,110,190,89,71,167,	0,404,53897,54818,102054,102432,104672,105928,107453,111735,114821,116527,117480,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	77088766	77099902	chr17:77088766-77099902	0	+	77088766	77088766	8553170	3	183,119,885,	0,386,10251,
#Partially deleted in new
chr17	77088776	77099174	chr17:77088776-77099174	0	+	77088776	77088776	8553170	3	101,119,157,	0,376,10241,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	77088777	77089829	chr17:77088777-77089829	0	+	77088777	77088777	8553170	2	172,677,	0,375,
#Partially deleted in new
chr17	77089154	77216802	chr17:77089154-77216802	1	+	77143596	77214023	789624	18	117,104,105,93,150,132,129,235,110,190,89,71,172,135,135,252,179,2885,	0,4089,53491,54412,101648,102026,104266,105522,107047,111329,114415,116121,117074,117573,120187,122795,124159,124763,
#Deleted in new
chr17	77089306	77089493	chr17:77089306-77089493	3	+	77089306	77089306	789624	1	187,	0,
#Deleted in new
chr17	77089416	77089497	chr17:77089416-77089497	3	+	77089416	77089416	5263520	1	81,	0,
#Partially deleted in new
chr17	77127872	77190952	chr17:77127872-77190952	0	+	77143596	77190952	789624	4	231,101,93,150,	0,14777,15694,62930,
#Partially deleted in new
chr17	77130093	77191307	chr17:77130093-77191307	0	+	77130093	77130093	8553170	5	98,105,93,150,120,	0,12552,13473,60709,61094,
#Partially deleted in new
chr17	77140735	77143642	chr17:77140735-77143642	0	+	77143596	77143642	789624	3	372,105,76,	0,1910,2831,
#Partially deleted in new
chr17	77140931	77214329	chr17:77140931-77214329	1	+	77143596	77214023	789624	17	123,105,93,150,132,129,235,110,190,89,71,172,135,135,252,179,412,	0,1714,2635,49871,50249,52489,53745,55270,59552,62638,64344,65297,65796,68410,71018,72382,72986,
#Partially deleted in new
chr17	77140978	77216906	chr17:77140978-77216906	1	+	77143596	77214023	789624	17	129,105,93,150,132,129,235,110,190,89,71,172,135,135,252,179,2989,	0,1667,2588,49824,50202,52442,53698,55223,59505,62591,64297,65250,65749,68363,70971,72335,72939,
#Partially deleted in new
chr17	77141031	77217101	chr17:77141031-77217101	1	+	77143596	77216564	789624	18	76,105,93,150,132,129,235,110,190,89,71,172,135,135,252,179,102,553,	0,1614,2535,49771,50149,52389,53645,55170,59452,62538,64244,65197,65696,68310,70918,72282,72886,75517,
#Partially deleted in new
chr17	77141069	77143860	chr17:77141069-77143860	0	+	77141069	77141069	8553170	3	38,105,294,	0,1576,2497,
#Partially deleted in new
chr17	77141385	77190920	chr17:77141385-77190920	0	+	77143596	77190920	789624	4	336,105,93,118,	0,1260,2181,49417,
#Partially deleted in new
chr17	77143596	77194757	chr17:77143596-77194757	0	+	77143596	77191226	789624	5	63,150,125,129,81,	0,47206,47591,49824,51080,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	77144645	77214360	chr17:77144645-77214360	1	+	77190841	77214023	789624	15	406,150,132,129,235,110,190,89,71,172,135,135,252,179,443,	0,46157,46535,48775,50031,51556,55838,58924,60630,61583,62082,64696,67304,68668,69272,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	77152560	77152674	chr17:77152560-77152674	3	-	77152560	77152560	8553170	1	114,	0,
#Partially deleted in new
chr17	77181036	77194733	chr17:77181036-77194733	0	+	77190841	77194733	789624	5	110,150,132,129,57,	0,9766,10144,12384,13640,
#Partially deleted in new
chr17	77185212	77214271	chr17:77185212-77214271	1	+	77190841	77214023	789624	15	171,150,132,129,235,110,190,89,71,172,135,135,252,179,354,	0,5590,5968,8208,9464,10989,15271,18357,20063,21016,21515,24129,26737,28101,28705,
#Partially deleted in new
chr17	77190802	77193549	chr17:77190802-77193549	0	+	77190802	77193431	789624	3	150,89,149,	0,378,2598,
#Partially deleted in new
chr17	77193420	77195031	chr17:77193420-77195031	0	+	77193420	77195018	789624	2	129,355,	0,1256,
#Partially deleted in new
chr17	77198949	77199543	chr17:77198949-77199543	7	-	77198949	77198949	16724991	2	48,246,	0,348,
#Deleted in new
chr17	77205206	77206862	chr17:77205206-77206862	0	+	77205206	77205206	8553170	3	140,172,135,	0,1022,1521,
#Partially deleted in new
chr17	77206814	77214360	chr17:77206814-77214360	0	+	77206814	77214012	789624	4	48,135,151,371,	0,2527,5135,7175,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	77209860	77214331	chr17:77209860-77214331	0	+	77209860	77209860	8553170	3	2341,179,414,	0,3453,4057,
#Deleted in new
chr17	77211736	77213766	chr17:77211736-77213766	0	+	77211736	77211736	8553170	2	465,453,	0,1577,
#Deleted in new
chr17	77212714	77214347	chr17:77212714-77214347	0	+	77212714	77212714	8553170	3	38,179,430,	0,599,1203,
#Partially deleted in new
chr17	77257736	77274326	chr17:77257736-77274326	3	-	77257736	77257736	8553170	2	612,137,	0,16453,
#Deleted in new
chr17	77257736	77258389	chr17:77257736-77258389	0	-	77257736	77257736	8553170	2	400,150,	0,503,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	77264179	77264776	chr17:77264179-77264776	3	-	77264179	77264179	8553170	1	597,	0,
#Partially deleted in new
chr17	77273783	77281897	chr17:77273783-77281897	1	-	77273783	77273783	789624	3	258,151,286,	0,406,7828,
#Partially deleted in new
chr17	77280568	77402402	chr17:77280568-77402402	0	+	77280775	77402402	789624	2	238,344,	0,121490,
#Partially deleted in new
chr17	77281409	77500592	chr17:77281409-77500592	3	+	77281535	77498658	0	12	145,57,645,192,129,82,138,118,96,97,52,2070,	0,25731,120649,200734,206014,206830,207317,209332,211211,211570,215905,217113,
#Partially deleted in new
chr17	77281436	77402329	chr17:77281436-77402329	0	+	77281535	77294889	789624	4	118,130,57,271,	0,13337,25704,120622,
#Partially deleted in new
chr17	77281450	77499029	chr17:77281450-77499029	1	+	77281535	77498658	0	11	104,645,192,129,82,138,118,96,97,52,507,	0,120608,200693,205973,206789,207276,209291,211170,211529,215864,217072,
#Partially deleted in new
chr17	77286306	77402449	chr17:77286306-77402449	0	+	77286350	77286422	789624	3	135,57,391,	0,20834,115752,
#Partially deleted in new
chr17	77287890	77500596	chr17:77287890-77500596	1	+	77402474	77498658	0	12	324,57,645,192,129,82,138,118,96,97,52,2074,	0,19250,114168,194253,199533,200349,200836,202851,204730,205089,209424,210632,
#Partially deleted in new
chr17	77287890	77500592	chr17:77287890-77500592	1	+	77402474	77498658	0	12	320,57,645,192,129,82,138,118,96,97,52,2070,	0,19250,114168,194253,199533,200349,200836,202851,204730,205089,209424,210632,
#Partially deleted in new
chr17	77287948	77402200	chr17:77287948-77402200	0	+	77287948	77287948	8553170	4	266,83,57,142,	0,6540,19192,114110,
#Partially deleted in new
chr17	77319514	77500592	chr17:77319514-77500592	1	+	77320326	77498658	0	11	834,645,192,129,82,138,118,96,97,52,2070,	0,82544,162629,167909,168725,169212,171227,173106,173465,177800,179008,
#Partially deleted in new
chr17	77319514	77500596	chr17:77319514-77500596	1	+	77320326	77498658	0	12	834,645,192,129,82,138,118,96,97,52,243,190,	0,82544,162629,167909,168725,169212,171227,173106,173465,177800,179008,180892,
#Partially deleted in new
chr17	77319591	77488761	chr17:77319591-77488761	0	+	77319767	77488246	789624	5	212,159,71,82,35,	0,82745,167890,168648,169135,
#Partially deleted in new
chr17	77319601	77402703	chr17:77319601-77402703	0	+	77319767	77402703	789624	2	202,367,	0,82735,
#Partially deleted in new
chr17	77320312	77402415	chr17:77320312-77402415	0	+	77322851	77402415	789624	3	36,160,357,	0,2476,81746,
#Partially deleted in new
chr17	77322609	77500593	chr17:77322609-77500593	1	+	77402474	77498658	0	12	61,645,192,129,82,138,118,96,97,52,979,330,	0,79449,159534,164814,165630,166117,168132,170011,170370,174705,175913,177654,
#Partially deleted in new
chr17	77323705	77402455	chr17:77323705-77402455	0	+	77323705	77323705	8553170	2	106,397,	0,78353,
#Partially deleted in new
chr17	77373189	77500594	chr17:77373189-77500594	1	+	77373497	77498658	0	11	363,645,192,129,82,138,118,96,97,52,2072,	0,28869,108954,114234,115050,115537,117552,119431,119790,124125,125333,
#Partially deleted in new
chr17	77373336	77487537	chr17:77373336-77487537	0	+	77373528	77487537	789624	4	216,148,192,114,	0,29219,108807,114087,
#Partially deleted in new
chr17	77373817	77377236	chr17:77373817-77377236	3	-	77373817	77373817	8553170	1	3419,	0,
#Partially deleted in new
chr17	77373932	77402393	chr17:77373932-77402393	0	+	77373932	77373932	8553170	2	205,335,	0,28126,
#Partially deleted in new
chr17	77374176	77402449	chr17:77374176-77402449	0	+	77374176	77374176	8553170	2	181,391,	0,27882,
#Partially deleted in new
chr17	77375920	77402089	chr17:77375920-77402089	0	+	77375920	77375920	8553170	2	478,31,	0,26138,
#Partially deleted in new
chr17	77376082	77500594	chr17:77376082-77500594	1	+	77402474	77498658	0	11	316,645,192,129,82,138,118,96,97,52,2072,	0,25976,106061,111341,112157,112644,114659,116538,116897,121232,122440,
#Partially deleted in new
chr17	77380122	77402483	chr17:77380122-77402483	0	+	77380218	77402483	789624	2	127,425,	0,21936,
#Partially deleted in new
chr17	77396983	77397054	chr17:77396983-77397054	3	-	77396983	77396983	5263520	1	71,	0,
#Partially deleted in new
chr17	77400557	77402579	chr17:77400557-77402579	0	+	77402474	77402579	789624	2	33,521,	0,1501,
#Partially deleted in new
chr17	77400583	77402389	chr17:77400583-77402389	0	+	77400583	77400583	8553170	2	135,331,	0,1475,
#Partially deleted in new
chr17	77402100	77484128	chr17:77402100-77484128	1	+	77402555	77482565	789624	2	603,1985,	0,80043,
#Partially deleted in new
chr17	77405076	77498941	chr17:77405076-77498941	1	+	77405091	77498658	0	10	64,192,129,82,138,118,96,97,52,419,	0,77067,82347,83163,83650,85665,87544,87903,92238,93446,
#Partially deleted in new
chr17	77419801	77488826	chr17:77419801-77488826	0	+	77482175	77488826	789624	5	79,192,129,82,100,	0,62342,67622,68438,68925,
#Partially deleted in new
chr17	77426955	77488273	chr17:77426955-77488273	0	+	77482175	77488273	789624	4	246,192,129,34,	0,55188,60468,61284,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	77442108	77442213	chr17:77442108-77442213	3	+	77442108	77442108	8553170	1	105,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	77444703	77447167	chr17:77444703-77447167	3	+	77444703	77444703	8553170	1	2464,	0,
#Partially deleted in new
chr17	77450566	77490859	chr17:77450566-77490859	0	+	77482175	77490859	789624	6	220,192,129,82,138,118,	0,31577,36857,37673,38160,40175,
#Partially deleted in new
chr17	77450575	77488297	chr17:77450575-77488297	0	+	77482175	77488297	789624	5	211,162,192,129,58,	0,791,31568,36848,37664,
#Partially deleted in new
chr17	77450736	77500594	chr17:77450736-77500594	1	+	77482175	77498658	0	10	50,192,129,82,138,118,96,97,52,2072,	0,31407,36687,37503,37990,40005,41884,42243,46578,47786,
#Partially deleted in new
chr17	77450847	77490818	chr17:77450847-77490818	0	+	77482175	77490818	789624	6	131,192,129,82,138,77,	0,31296,36576,37392,37879,39894,
#Partially deleted in new
chr17	77451243	77499024	chr17:77451243-77499024	1	+	77482175	77498658	0	10	285,192,129,82,138,118,96,97,52,502,	0,30900,36180,36996,37483,39498,41377,41736,46071,47279,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	77451243	77496367	chr17:77451243-77496367	0	+	77451243	77451243	8553170	9	285,192,129,82,138,118,96,97,154,	0,30900,36180,36996,37483,39498,41377,41736,44970,
#Partially deleted in new
chr17	77453824	77488762	chr17:77453824-77488762	0	+	77482175	77488762	789624	5	172,192,129,82,36,	0,28319,33599,34415,34902,
#Partially deleted in new
chr17	77453992	77499040	chr17:77453992-77499040	1	+	77482175	77498658	0	10	371,192,129,82,138,118,96,97,52,518,	0,28151,33431,34247,34734,36749,38628,38987,43322,44530,
#Partially deleted in new
chr17	77454026	77488810	chr17:77454026-77488810	0	+	77482175	77488810	789624	5	82,192,129,82,84,	0,28117,33397,34213,34700,
#Partially deleted in new
chr17	77454071	77488851	chr17:77454071-77488851	0	+	77482175	77488851	789624	5	378,192,129,82,125,	0,28072,33352,34168,34655,
#Partially deleted in new
chr17	77454079	77487493	chr17:77454079-77487493	1	+	77482175	77487442	789624	3	284,192,65,	0,28064,33349,
#Partially deleted in new
chr17	77456365	77488737	chr17:77456365-77488737	0	+	77482175	77488737	789624	5	141,192,129,82,11,	0,25778,31058,31874,32361,
#Partially deleted in new
chr17	77466402	77490859	chr17:77466402-77490859	0	+	77482175	77490859	789624	6	158,192,129,82,138,118,	0,15741,21021,21837,22324,24339,
#Deleted in new
chr17	77469067	77471045	chr17:77469067-77471045	3	+	77469067	77469067	8553170	2	587,181,	0,1797,
#Deleted in new
chr17	77469161	77472770	chr17:77469161-77472770	3	-	77469161	77469161	8553170	3	531,294,307,	0,1588,3302,
#Partially deleted in new
chr17	77475242	77500592	chr17:77475242-77500592	1	+	77475518	77498658	0	10	661,192,129,82,138,118,96,97,52,2070,	0,6901,12181,12997,13484,15499,17378,17737,22072,23280,
#Partially deleted in new
chr17	77481909	77488264	chr17:77481909-77488264	0	+	77482175	77488264	789624	3	426,129,25,	0,5514,6330,
#Partially deleted in new
chr17	77481912	77488788	chr17:77481912-77488788	0	+	77482175	77488788	789624	5	100,192,129,82,62,	0,231,5511,6327,6814,
#Partially deleted in new
chr17	77488802	77493230	chr17:77488802-77493230	0	+	77488802	77488802	8553170	4	62,118,96,251,	0,1939,3818,4177,
#Partially deleted in new
chr17	77490807	77497614	chr17:77490807-77497614	0	+	77490807	77490807	8553170	4	52,96,97,300,	0,1813,2172,6507,
#Deleted in new
chr17	77497074	77498824	chr17:77497074-77498824	0	+	77497074	77497074	8553170	2	292,302,	0,1448,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	77528124	77536592	chr17:77528124-77536592	3	+	77528124	77528124	8553170	4	3685,169,233,353,	0,4973,6330,8115,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	77528852	77534683	chr17:77528852-77534683	0	+	77528852	77528852	8553170	4	45,479,86,229,	0,1608,4328,5602,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	77529048	77534712	chr17:77529048-77534712	0	+	77529048	77529048	8553170	2	301,258,	0,5406,
#Partially deleted in new
chr17	77546940	77563243	chr17:77546940-77563243	0	+	77546940	77546940	5263520	2	152,2299,	0,14004,
#Deleted in new
chr17	77558141	77563243	chr17:77558141-77563243	3	+	77558141	77558141	8553170	3	2455,148,2299,	0,2554,2803,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	77563367	77568695	chr17:77563367-77568695	3	-	77563367	77563367	8553170	2	1577,190,	0,5138,
#Deleted in new
chr17	77571417	77572516	chr17:77571417-77572516	3	+	77571417	77571417	8553170	1	1099,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	77590531	77680687	chr17:77590531-77680687	3	+	77590531	77590531	8553170	5	1078,151,178,235,1080,	0,2994,6723,76422,89076,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	77722871	77728559	chr17:77722871-77728559	3	-	77722871	77722871	789624	2	2131,150,	0,5538,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	77879026	77884087	chr17:77879026-77884087	3	-	77879026	77879026	789624	2	4512,166,	0,4895,
#Partially deleted in new
chr17	77959239	78106037	chr17:77959239-78106037	1	+	78004206	78104845	789624	23	29,100,22,327,2604,216,167,81,58,143,174,147,120,84,241,168,192,144,117,195,71,140,1553,	0,44930,45818,72276,89605,105482,108517,111845,113797,115896,117921,120155,123807,127263,127613,132200,133693,134380,138505,139103,143234,144174,145245,
#Partially deleted in new
chr17	78004167	78107464	chr17:78004167-78107464	1	+	78049062	78104845	0	22	102,22,58,327,2613,216,167,81,58,143,150,147,120,84,241,168,192,144,195,71,140,2980,	0,890,7835,27348,44677,60554,63589,66917,68869,70968,73017,75227,78879,82335,82685,87272,88765,89452,94175,98306,99246,100317,
#Partially deleted in new
chr17	78004167	78107464	chr17:78004167-78107464	1	+	78049062	78104845	0	23	102,22,58,327,2604,216,167,81,58,143,150,147,120,84,241,168,192,144,117,195,71,140,2980,	0,890,7835,27348,44677,60554,63589,66917,68869,70968,73017,75227,78879,82335,82685,87272,88765,89452,93577,94175,98306,99246,100317,
#Partially deleted in new
chr17	78005055	78108835	chr17:78005055-78108835	1	+	78049062	78104845	0	20	24,327,2613,216,167,81,58,143,150,147,120,84,241,168,192,144,195,71,140,4351,	0,26460,43789,59666,62701,66029,67981,70080,72129,74339,77991,81447,81797,86384,87877,88564,93287,97418,98358,99429,
#Partially deleted in new
chr17	78005055	78108835	chr17:78005055-78108835	3	+	78049062	78104845	0	21	24,327,2604,216,167,81,58,143,150,147,120,84,241,168,192,144,117,195,71,140,4351,	0,26460,43789,59666,62701,66029,67981,70080,72129,74339,77991,81447,81797,86384,87877,88564,92689,93287,97418,98358,99429,
#Deleted in new
chr17	78008420	78008855	chr17:78008420-78008855	3	+	78008420	78008420	8553170	1	435,	0,
#Partially deleted in new
chr17	78031521	78067910	chr17:78031521-78067910	0	+	78064741	78067910	789624	3	321,207,154,	0,33209,36235,
#Partially deleted in new
chr17	78041046	78049349	chr17:78041046-78049349	0	+	78049062	78049349	789624	2	71,505,	0,7798,
#Partially deleted in new
chr17	78051066	78077779	chr17:78051066-78077779	0	+	78051066	78051066	8553170	7	382,216,167,81,58,143,595,	0,13655,16690,20018,21970,24069,26118,
#Partially deleted in new
chr17	78064893	78075385	chr17:78064893-78075385	0	+	78064893	78064893	8553170	5	44,167,81,58,250,	0,2863,6191,8143,10242,
#Deleted in new
chr17	78066257	78066761	chr17:78066257-78066761	7	-	78066257	78066257	16724991	1	504,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	78066946	78067053	chr17:78066946-78067053	3	+	78066946	78066946	8553170	1	107,	0,
#Partially deleted in new
chr17	78091366	78093299	chr17:78091366-78093299	0	+	78091366	78091366	8553170	2	241,367,	0,1566,
#Partially deleted in new
chr17	78098341	78102821	chr17:78098341-78102821	0	+	78098341	78098341	8553170	2	196,348,	0,4132,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	78107397	78111799	chr17:78107397-78111799	3	-	78107397	78107397	789624	2	443,2749,	0,1653,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	78107397	78110335	chr17:78107397-78110335	0	-	78107397	78107397	8553170	1	2938,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr17	78110457	78128697	chr17:78110457-78128697	1	-	78113147	78126832	789624	20	2754,77,79,177,134,76,96,180,152,156,145,191,258,97,106,159,90,125,130,86,	0,3090,6811,7010,7344,8513,8839,10195,10555,11098,12147,13531,14066,14431,14700,15268,15819,16066,16319,18154,
#Partially deleted in new
chr17	78112918	78123123	chr17:78112918-78123123	0	-	78112918	78112918	8553170	4	293,77,145,178,	0,629,9686,10027,
#Partially deleted in new
chr17	78112920	78132407	chr17:78112920-78132407	3	-	78113147	78126832	789624	20	291,77,79,177,134,76,96,180,152,156,145,191,258,97,106,159,90,125,130,67,	0,627,4348,4547,4881,6050,6376,7732,8092,8635,9684,11068,11603,11968,12237,12805,13356,13603,13856,19420,
#Partially deleted in new
chr17	78112920	78127020	chr17:78112920-78127020	1	-	78113147	78126832	789624	19	291,77,79,177,134,76,96,180,152,156,145,191,258,97,106,159,90,125,244,	0,627,4348,4547,4881,6050,6376,7732,8092,8635,9684,11068,11603,11968,12237,12805,13356,13603,13856,
#Deleted in new
chr17	78112921	78113959	chr17:78112921-78113959	0	-	78112921	78112921	8553170	2	290,412,	0,626,
#Partially deleted in new
chr17	78112924	78128630	chr17:78112924-78128630	1	-	78113147	78126832	789624	12	287,74,145,191,258,97,106,159,90,125,130,19,	0,623,9680,11064,11599,11964,12233,12801,13352,13599,13852,15687,
#Partially deleted in new
chr17	78113075	78128772	chr17:78113075-78128772	0	-	78113075	78113075	8553170	19	136,77,79,177,134,76,96,180,152,156,145,191,258,97,106,641,125,130,114,	0,472,4193,4392,4726,5895,6221,7577,7937,8480,9529,10913,11448,11813,12082,12650,13448,13701,15583,
#Partially deleted in new
chr17	78113147	78122748	chr17:78113147-78122748	1	-	78113147	78122748	789624	10	64,77,79,177,134,76,96,152,156,144,	0,400,4121,4320,4654,5823,6149,7865,8408,9457,
#Partially deleted in new
chr17	78117315	78118172	chr17:78117315-78118172	0	-	78117315	78117315	8553170	3	32,177,371,	0,152,486,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	78118970	78120719	chr17:78118970-78120719	0	-	78118970	78118970	8553170	4	76,96,147,67,	0,326,1438,1682,
#Partially deleted in new
chr17	78119061	78120796	chr17:78119061-78120796	0	-	78119061	78119061	8553170	2	331,144,	0,1591,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	78120176	78128730	chr17:78120176-78128730	0	-	78120176	78120176	8553170	13	656,152,156,145,191,258,97,106,159,90,125,130,119,	0,836,1379,2428,3812,4347,4712,4981,5549,6100,6347,6600,8435,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	78120176	78128782	chr17:78120176-78128782	1	-	78120969	78124733	789624	10	988,156,145,191,258,106,159,90,125,171,	0,1379,2428,3812,4347,4981,5549,6100,6347,8435,
#Deleted in new
chr17	78122559	78124350	chr17:78122559-78124350	0	-	78122559	78122559	8553170	2	190,362,	0,1429,
#Deleted in new
chr17	78124178	78125889	chr17:78124178-78125889	0	-	78124178	78124178	8553170	4	603,97,106,164,	0,710,979,1547,
#Deleted in new
chr17	78124557	78128758	chr17:78124557-78128758	0	-	78124557	78126832	789624	8	224,97,106,159,90,125,198,100,	0,331,600,1168,1719,1966,2219,4101,
#Deleted in new
chr17	78125079	78126832	chr17:78125079-78126832	0	-	78125079	78125079	8553170	5	184,159,90,125,56,	0,646,1197,1444,1697,
#Deleted in new
chr17	78125232	78128751	chr17:78125232-78128751	0	-	78125232	78126832	789624	6	31,159,90,125,198,140,	0,493,1044,1291,1544,3379,
#Partially deleted in new
chr17	78125725	78130683	chr17:78125725-78130683	0	-	78125725	78126832	789624	5	159,90,125,130,47,	0,551,798,1051,4911,
#Partially deleted in new
chr17	78125753	78131397	chr17:78125753-78131397	0	-	78126526	78126832	789624	5	131,90,73,130,397,	0,523,770,1023,5247,
#Deleted in new
chr17	78125922	78128755	chr17:78125922-78128755	0	-	78125922	78125922	8553170	4	444,125,130,144,	0,601,854,2689,
#Deleted in new
chr17	78126064	78128755	chr17:78126064-78128755	0	-	78126064	78126064	8553170	3	302,125,144,	0,459,2547,
#Deleted in new
chr17	78126195	78126997	chr17:78126195-78126997	0	-	78126195	78126195	8553170	3	171,125,221,	0,328,581,
#Deleted in new
chr17	78130769	78131595	chr17:78130769-78131595	0	+	78131588	78131595	8553170	2	118,315,	0,511,
#Deleted in new
chr17	78130777	78132465	chr17:78130777-78132465	0	+	78131588	78132465	789624	4	74,457,333,107,	0,503,1104,1581,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr17	78130785	78142968	chr17:78130785-78142968	3	+	78131588	78141112	789624	16	66,457,149,150,83,137,148,171,140,124,98,184,131,159,79,2135,	0,495,1096,1573,2002,2620,3067,3608,4084,6449,6931,7219,7563,7788,8376,10048,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	78130787	78142967	chr17:78130787-78142967	1	+	78133853	78141112	789624	15	64,125,150,83,137,148,171,140,124,98,184,131,159,79,2134,	0,493,1571,2000,2618,3065,3606,4082,6447,6929,7217,7561,7786,8374,10046,
#Deleted in new
chr17	78132149	78132402	chr17:78132149-78132402	0	-	78132149	78132149	8553170	1	253,	0,
#Partially deleted in new
chr17	78134867	78138071	chr17:78134867-78138071	0	+	78134867	78134867	8553170	3	142,580,67,	0,2367,3137,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	78134867	78137047	chr17:78134867-78137047	0	+	78134867	78134867	8553170	2	142,428,	0,1752,
#Partially deleted in new
chr17	78134948	78138071	chr17:78134948-78138071	0	+	78134948	78134948	8553170	4	61,89,98,67,	0,2286,2768,3056,
#Deleted in new
chr17	78137653	78138167	chr17:78137653-78138167	0	+	78137653	78137653	8553170	2	161,163,	0,351,
#Partially deleted in new
chr17	78138362	78141229	chr17:78138362-78141229	0	+	78138362	78138362	8553170	4	117,183,79,393,	0,187,799,2474,
#Partially deleted in new
chr17	78146352	78166177	chr17:78146352-78166177	3	+	78146407	78166046	789624	5	92,33,300,270,289,	0,526,14602,17742,19536,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	78146404	78161073	chr17:78146404-78161073	0	+	78146404	78146404	8553170	3	40,33,306,	0,474,14363,
#Partially deleted in new
chr17	78146853	78164304	chr17:78146853-78164304	0	+	78146853	78164304	789624	3	58,300,210,	0,14101,17241,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	78157402	78159135	chr17:78157402-78159135	7	+	78157402	78157402	16724991	3	93,378,576,	0,417,1157,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	78160063	78166155	chr17:78160063-78166155	0	+	78160063	78160063	8553170	3	43,300,2061,	0,891,4031,
#Partially deleted in new
chr17	78161039	78166135	chr17:78161039-78166135	0	+	78161039	78165895	789624	3	215,232,247,	0,3093,4849,
#Partially deleted in new
chr17	78164557	78166154	chr17:78164557-78166154	0	+	78164557	78164557	8553170	2	105,266,	0,1331,
#Partially deleted in new
chr17	78168557	78173527	chr17:78168557-78173527	3	+	78168616	78171936	789624	4	158,238,140,1789,	0,2259,2952,3181,
#Partially deleted in new
chr17	78168593	78173335	chr17:78168593-78173335	1	+	78168616	78171936	789624	5	122,238,140,204,245,	0,2223,2916,3145,4497,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	78168601	78171977	chr17:78168601-78171977	0	+	78168616	78170854	789624	3	114,443,239,	0,2010,3137,
#Partially deleted in new
chr17	78168603	78173527	chr17:78168603-78173527	1	+	78168616	78171608	789624	3	112,140,1789,	0,2906,3135,
#Partially deleted in new
chr17	78168609	78171574	chr17:78168609-78171574	0	+	78168609	78168609	8553170	2	106,758,	0,2207,
#Partially deleted in new
chr17	78168610	78172719	chr17:78168610-78172719	1	+	78168616	78172000	789624	3	105,238,1210,	0,2206,2899,
#Partially deleted in new
chr17	78168617	78173527	chr17:78168617-78173527	0	+	78168617	78171809	789624	3	98,238,1789,	0,2199,3121,
#Partially deleted in new
chr17	78169157	78173527	chr17:78169157-78173527	1	+	78170885	78171936	789624	4	72,238,140,1789,	0,1659,2352,2581,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	78169683	78172719	chr17:78169683-78172719	0	+	78169683	78169683	8553170	1	3036,	0,
#Partially deleted in new
chr17	78174074	78187233	chr17:78174074-78187233	3	-	78174758	78186994	0	7	876,120,90,94,111,32,305,	0,975,1454,8514,10980,12712,12854,
#Partially deleted in new
chr17	78174120	78187233	chr17:78174120-78187233	1	-	78174758	78186994	789624	6	1049,90,94,111,32,305,	0,1408,8468,10934,12666,12808,
#Partially deleted in new
chr17	78174701	78187036	chr17:78174701-78187036	1	-	78174758	78186994	789624	7	87,120,90,94,111,32,108,	0,348,827,7887,10353,12085,12227,
#Partially deleted in new
chr17	78174829	78187038	chr17:78174829-78187038	1	-	78175563	78186994	789624	5	340,90,111,32,110,	0,699,10225,11957,12099,
#Partially deleted in new
chr17	78174925	78187063	chr17:78174925-78187063	0	-	78174925	78186994	789624	8	25,120,90,94,24,111,32,135,	0,124,603,7663,8828,10129,11861,12003,
#Partially deleted in new
chr17	78175068	78187021	chr17:78175068-78187021	0	-	78175068	78175068	8553170	5	101,90,94,111,235,	0,460,7520,9986,11718,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	78187316	78207701	chr17:78187316-78207701	3	+	78187370	78206937	789624	11	117,91,105,49,86,73,98,79,136,105,791,	0,3653,15182,15386,17339,17511,17776,18123,18286,18629,19594,
#Partially deleted in new
chr17	78187357	78205051	chr17:78187357-78205051	0	+	78187370	78205051	789624	6	76,91,105,49,86,224,	0,3612,15141,15345,17298,17470,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	78187361	78207701	chr17:78187361-78207701	1	+	78187370	78206937	789624	11	72,91,105,49,86,73,98,79,151,105,791,	0,3608,15137,15341,17294,17466,17731,18078,18241,18584,19549,
#Partially deleted in new
chr17	78187361	78207187	chr17:78187361-78207187	0	+	78187370	78205467	789624	7	72,91,105,49,79,105,277,	0,3608,15137,15341,18078,18584,19549,
#Partially deleted in new
chr17	78187361	78207240	chr17:78187361-78207240	1	+	78187370	78206024	789624	5	72,91,49,105,330,	0,3608,15341,18584,19549,
#Partially deleted in new
chr17	78187361	78204852	chr17:78187361-78204852	0	+	78187370	78192665	789624	7	72,91,149,105,49,86,25,	0,3608,5275,15137,15341,17294,17466,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	78187361	78197560	chr17:78187361-78197560	1	+	78187370	78197165	789624	3	72,91,415,	0,3608,9784,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	78187361	78207329	chr17:78187361-78207329	1	+	78187370	78207011	789624	3	72,91,419,	0,3608,19549,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	78187361	78204039	chr17:78187361-78204039	0	+	78187361	78187361	8553170	4	72,91,105,1337,	0,3608,15137,15341,
#Partially deleted in new
chr17	78187363	78205081	chr17:78187363-78205081	0	+	78187370	78205081	789624	5	70,91,105,49,254,	0,3606,15135,15339,17464,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	78187400	78197560	chr17:78187400-78197560	1	+	78187421	78197145	789624	3	33,91,426,	0,3569,9734,
#Partially deleted in new
chr17	78190710	78202734	chr17:78190710-78202734	0	+	78190710	78190710	8553170	3	350,105,32,	0,11788,11992,
#Partially deleted in new
chr17	78202508	78207202	chr17:78202508-78207202	0	+	78202508	78202508	8553170	4	95,49,105,292,	0,194,3437,4402,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	78202571	78207405	chr17:78202571-78207405	0	+	78202571	78202571	8553170	5	32,49,73,105,495,	0,131,2256,3374,4339,
#Partially deleted in new
chr17	78202720	78207052	chr17:78202720-78207052	0	+	78202720	78202720	8553170	5	31,79,136,105,142,	0,2719,2882,3225,4190,
#Deleted in new
chr17	78211617	78211908	chr17:78211617-78211908	7	-	78211617	78211617	16724991	1	291,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	78214185	78225636	chr17:78214185-78225636	1	+	78214316	78223554	789624	5	242,110,69,118,2172,	0,494,1780,2478,9279,
#Partially deleted in new
chr17	78214197	78225636	chr17:78214197-78225636	3	+	78214316	78223554	789624	4	230,110,118,2172,	0,482,2466,9267,
#Partially deleted in new
chr17	78214262	78223554	chr17:78214262-78223554	0	+	78214316	78222851	789624	5	165,110,118,165,90,	0,417,2401,8565,9202,
#Partially deleted in new
chr17	78214263	78225636	chr17:78214263-78225636	1	+	78214316	78223657	789624	3	164,110,2172,	0,416,9201,
#Partially deleted in new
chr17	78214279	78215099	chr17:78214279-78215099	1	+	78214316	78214793	789624	2	148,420,	0,400,
#Partially deleted in new
chr17	78214316	78222992	chr17:78214316-78222992	1	+	78214316	78222843	789624	3	111,110,165,	0,363,8511,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	78214364	78222979	chr17:78214364-78222979	0	+	78214364	78214364	8553170	4	63,110,816,152,	0,315,1601,8463,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	78214384	78222979	chr17:78214384-78222979	0	+	78214384	78216062	789624	5	43,110,101,118,152,	0,295,1581,2279,8443,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	78214384	78222979	chr17:78214384-78222979	0	+	78214384	78222851	789624	5	43,110,69,118,152,	0,295,1581,2279,8443,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	78214384	78222979	chr17:78214384-78222979	0	+	78214384	78214793	789624	5	43,114,69,118,152,	0,295,1581,2279,8443,
#Partially deleted in new
chr17	78216426	78223856	chr17:78216426-78223856	0	+	78216426	78216426	8553170	2	355,392,	0,7038,
#Partially deleted in new
chr17	78231309	78240986	chr17:78231309-78240986	1	+	78232023	78239792	789624	5	32,782,138,250,1207,	0,122,3283,7714,8470,
#Partially deleted in new
chr17	78231309	78240986	chr17:78231309-78240986	3	+	78232023	78239792	789624	6	32,782,81,138,250,1207,	0,122,2585,3283,7714,8470,
#Partially deleted in new
chr17	78231309	78240987	chr17:78231309-78240987	1	+	78232023	78239792	789624	4	32,782,250,1208,	0,122,7714,8470,
#Partially deleted in new
chr17	78231902	78240186	chr17:78231902-78240186	1	+	78232023	78239792	789624	5	311,81,138,250,407,	0,1992,2690,7121,7877,
#Partially deleted in new
chr17	78232023	78240987	chr17:78232023-78240987	1	+	78232023	78239792	789624	4	190,138,250,1208,	0,2569,7000,7756,
#Partially deleted in new
chr17	78232040	78240507	chr17:78232040-78240507	0	+	78232040	78239792	789624	6	173,81,111,138,250,728,	0,1854,2193,2552,6983,7739,
#Deleted in new
chr17	78248192	78251440	chr17:78248192-78251440	3	+	78248192	78248192	8553170	2	573,219,	0,3029,
#Partially deleted in new
chr17	78248492	78254416	chr17:78248492-78254416	7	-	78248492	78248492	16724991	7	256,193,138,185,89,84,200,	0,793,1192,2111,2826,3623,5724,
#Deleted in new
chr17	78250345	78250932	chr17:78250345-78250932	3	-	78250345	78250345	8553170	1	587,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	78261348	78278492	chr17:78261348-78278492	3	-	78261348	78261348	789624	7	565,976,257,176,195,716,49,	0,1898,4628,8421,9303,9903,17095,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	78315728	78347798	chr17:78315728-78347798	3	+	78315728	78315728	8553170	3	60,297,442,	0,28236,31628,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	78342736	78344357	chr17:78342736-78344357	1	+	78342736	78342736	8553170	2	250,393,	0,1228,
#Deleted in new
chr17	78356777	78360077	chr17:78356777-78360077	3	-	78358417	78359095	789624	2	2406,328,	0,2972,
#Deleted in new
chr17	78359048	78360074	chr17:78359048-78360074	0	-	78359048	78359095	789624	2	101,260,	0,766,
#Partially deleted in new
chr17	78362670	78364905	chr17:78362670-78364905	1	+	78362670	78362670	8553170	2	81,409,	0,1826,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	78370851	78371135	chr17:78370851-78371135	3	-	78370851	78370851	8553170	1	284,	0,
#Partially deleted in new
chr17	78378639	78424554	chr17:78378639-78424554	3	+	78378665	78419665	789624	10	169,190,78,100,190,179,522,149,130,494,	0,13836,17668,19612,20708,22037,24928,36239,40906,45421,
#Partially deleted in new
chr17	78378648	78424554	chr17:78378648-78424554	0	+	78378665	78396317	789624	9	160,78,100,190,121,522,149,130,494,	0,17659,19603,20699,22086,24919,36230,40897,45412,
#Partially deleted in new
chr17	78378650	78403918	chr17:78378650-78403918	0	+	78378665	78403918	789624	6	158,190,100,190,179,351,	0,13825,19601,20697,22026,24917,
#Partially deleted in new
chr17	78378656	78424554	chr17:78378656-78424554	0	+	78378665	78414992	789624	9	152,190,100,190,179,522,76,130,494,	0,13819,19595,20691,22020,24911,36295,40889,45404,
#Partially deleted in new
chr17	78378661	78424141	chr17:78378661-78424141	0	+	78378665	78392625	789624	9	147,152,100,190,179,522,149,180,81,	0,13852,19590,20686,22015,24906,36217,40884,45399,
#Partially deleted in new
chr17	78378669	78403679	chr17:78378669-78403679	0	+	78378669	78403679	789624	7	139,190,78,100,190,179,112,	0,13806,17638,19582,20678,22007,24898,
#Partially deleted in new
chr17	78378677	78400854	chr17:78378677-78400854	0	+	78378677	78400854	789624	6	131,152,78,100,190,141,	0,13836,17630,19574,20670,22036,
#Partially deleted in new
chr17	78378696	78419596	chr17:78378696-78419596	0	+	78378696	78378696	8553170	7	112,190,78,100,114,76,51,	0,13779,17611,19555,25279,36255,40849,
#Partially deleted in new
chr17	78399288	78424557	chr17:78399288-78424557	0	+	78399288	78399288	8553170	6	249,179,522,149,180,497,	0,1388,4279,15590,20257,24772,
#Deleted in new
chr17	78399934	78400063	chr17:78399934-78400063	3	+	78399934	78399934	8553170	1	129,	0,
#Partially deleted in new
chr17	78400830	78421911	chr17:78400830-78421911	0	+	78400830	78400830	8553170	4	25,522,149,2366,	0,2737,14048,18715,
#Partially deleted in new
chr17	78403834	78419862	chr17:78403834-78419862	0	+	78403834	78419688	789624	2	255,317,	0,15711,
#Partially deleted in new
chr17	78403963	78419927	chr17:78403963-78419927	0	+	78403963	78419688	789624	3	126,76,382,	0,10988,15582,
#Partially deleted in new
chr17	78420221	78425114	chr17:78420221-78425114	0	+	78420221	78420221	8553170	3	102,132,197,	0,3839,4696,
#Partially deleted in new
chr17	78423696	78577394	chr17:78423696-78577394	3	-	78423905	78575057	789624	81	457,226,144,183,183,180,192,228,128,149,194,123,171,141,165,205,123,236,193,116,208,218,96,165,234,162,267,192,165,162,92,148,103,166,208,174,283,149,128,133,138,228,139,158,105,157,161,132,108,126,153,127,92,348,123,249,153,87,117,223,170,255,183,144,141,104,109,147,196,266,117,168,87,153,126,86,100,193,194,370,100,	0,1649,2760,3229,4828,5424,10332,13944,15393,17354,20907,21861,25717,26557,26985,27772,29646,30773,31947,34868,35304,36087,36465,37847,39147,42958,44920,51581,51972,52875,55328,55788,56987,61171,61853,62263,62527,67002,67746,68936,70339,70896,71262,72178,75311,76608,77487,78045,78894,79189,81596,83023,83581,83761,86687,91077,101312,102954,103183,105775,106646,108785,113602,116040,120160,127838,129000,134411,137043,138018,142917,143302,145469,145678,146550,147251,147582,147893,149004,151016,153598,
#Partially deleted in new
chr17	78423696	78577394	chr17:78423696-78577394	1	-	78423905	78575057	789624	81	457,226,144,183,183,180,192,228,128,149,194,123,171,141,165,205,123,236,193,116,208,218,96,165,234,162,267,192,165,162,92,148,103,166,208,174,283,149,128,133,138,228,139,158,105,157,161,126,108,126,153,127,92,348,123,249,153,87,117,223,170,255,183,135,141,104,109,147,196,266,117,168,87,153,126,86,100,193,194,370,100,	0,1649,2760,3229,4828,5424,10332,13944,15393,17354,20907,21861,25717,26557,26985,27772,29646,30773,31947,34868,35304,36087,36465,37847,39147,42958,44920,51581,51972,52875,55328,55788,56987,61171,61853,62263,62527,67002,67746,68936,70339,70896,71262,72178,75311,76608,77487,78051,78894,79189,81596,83023,83581,83761,86687,91077,101312,102954,103183,105775,106646,108785,113602,116049,120160,127838,129000,134411,137043,138018,142917,143302,145469,145678,146550,147251,147582,147893,149004,151016,153598,
#Partially deleted in new
chr17	78423696	78472774	chr17:78423696-78472774	0	-	78425417	78472774	789624	28	457,246,144,183,183,180,192,228,128,149,194,123,171,141,165,205,123,236,193,116,208,218,96,165,234,162,267,113,	0,1649,2760,3229,4828,5424,10332,13944,15393,17354,20907,21861,25717,26557,26985,27772,29646,30773,31947,34868,35304,36087,36465,37847,39147,42958,44920,48965,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	78423699	78450298	chr17:78423699-78450298	0	-	78423699	78423699	8553170	13	454,226,144,183,183,180,192,228,128,149,194,123,885,	0,1646,2757,3226,4825,5421,10329,13941,15390,17351,20904,21858,25714,
#Partially deleted in new
chr17	78423904	78491490	chr17:78423904-78491490	0	-	78423904	78423904	8553170	35	249,226,144,208,183,180,192,228,128,194,123,171,141,165,205,123,236,212,208,218,96,165,234,162,267,192,191,240,148,260,208,174,283,149,48,	0,1441,2552,3021,4620,5216,10124,13736,15185,20699,21653,25509,26349,26777,27564,29438,30565,34564,35096,35879,36257,37639,38939,42750,44712,51373,51764,54972,55580,60869,61645,62055,62319,66794,67538,
#Partially deleted in new
chr17	78425523	78426720	chr17:78425523-78426720	0	-	78425523	78425523	8553170	2	48,264,	0,933,
#Partially deleted in new
chr17	78426486	78429240	chr17:78426486-78429240	0	-	78426486	78426486	8553170	3	114,183,120,	0,439,2634,
#Partially deleted in new
chr17	78426927	78428551	chr17:78426927-78428551	0	-	78426927	78426927	8553170	2	181,231,	0,1393,
#Partially deleted in new
chr17	78451495	78458888	chr17:78451495-78458888	0	-	78451495	78451495	8553170	5	178,123,236,193,324,	0,1847,2974,4148,7069,
#Partially deleted in new
chr17	78484881	78490105	chr17:78484881-78490105	1	+	78484881	78484881	8553170	3	209,200,104,	0,4493,5120,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	78484909	78499346	chr17:78484909-78499346	3	+	78484909	78484909	789624	6	253,200,132,184,181,503,	0,4465,8177,9104,11946,13934,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	78496652	78503056	chr17:78496652-78503056	0	+	78496652	78496652	8553170	2	384,4213,	0,2191,
#Partially deleted in new
chr17	78502142	78510671	chr17:78502142-78510671	0	-	78502142	78502142	8553170	7	395,126,153,127,92,348,288,	0,743,3150,4577,5135,5315,8241,
#Deleted in new
chr17	78522246	78522828	chr17:78522246-78522828	7	+	78522246	78522246	16724991	1	582,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	78532812	78533055	chr17:78532812-78533055	3	-	78532812	78532812	8553170	1	243,	0,
#Partially deleted in new
chr17	78543754	78571322	chr17:78543754-78571322	0	-	78543754	78543754	8553170	13	243,104,109,147,196,266,117,168,87,153,126,86,44,	0,7780,8942,14353,16985,17960,22859,23244,25411,25620,26492,27193,27524,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	78607927	78632104	chr17:78607927-78632104	3	-	78607927	78607927	8553170	5	1186,124,121,399,186,	0,16264,20390,22104,23991,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	78608088	78632064	chr17:78608088-78632064	0	-	78608088	78608088	8553170	4	1025,124,399,116,	0,16103,21943,23860,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	78608241	78632134	chr17:78608241-78632134	0	-	78608241	78608241	8553170	4	872,124,399,145,	0,15950,21790,23748,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	78617376	78632011	chr17:78617376-78632011	0	-	78617376	78617376	8553170	5	250,67,124,399,22,	0,4290,6815,12655,14613,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	78617376	78632089	chr17:78617376-78632089	0	-	78617376	78617376	8553170	5	250,124,121,399,141,	0,6815,10941,12655,14572,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	78617385	78632155	chr17:78617385-78632155	0	-	78617385	78617385	8553170	4	241,124,399,166,	0,6806,12646,14604,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	78617387	78618562	chr17:78617387-78618562	0	-	78617387	78617387	8553170	3	239,179,242,	0,642,933,
#Duplicated in new
chr17	78617387	78632058	chr17:78617387-78632058	0	-	78617387	78617387	8553170	5	239,179,124,249,69,	0,642,6804,12644,14602,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	78617387	78632090	chr17:78617387-78632090	0	-	78617387	78617387	8553170	6	239,124,121,110,114,142,	0,6804,10930,12644,12929,14561,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	78617392	78632051	chr17:78617392-78632051	1	-	78617392	78617392	789624	5	1652,124,118,249,103,	0,6799,10525,12639,14556,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	78617392	78618623	chr17:78617392-78618623	0	-	78617392	78617392	8553170	2	234,594,	0,637,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	78617392	78632017	chr17:78617392-78632017	0	-	78617392	78617392	8553170	4	234,124,114,28,	0,6799,12924,14597,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	78617392	78632048	chr17:78617392-78632048	1	-	78617392	78617392	8553170	7	234,67,124,121,110,114,100,	0,4274,6799,10925,12639,12924,14556,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	78617396	78632067	chr17:78617396-78632067	1	-	78617396	78617396	8553170	6	230,124,121,202,399,78,	0,6795,10921,12224,12635,14593,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	78617397	78632064	chr17:78617397-78632064	0	-	78617397	78617397	8553170	5	229,179,124,399,75,	0,632,6794,12634,14592,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	78617425	78632048	chr17:78617425-78632048	1	-	78617425	78617425	8553170	6	201,179,124,121,399,59,	0,604,6766,10892,12606,14564,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	78617598	78630403	chr17:78617598-78630403	1	-	78617598	78617598	8553170	5	28,67,197,124,372,	0,4068,5955,6593,12433,
#Partially deleted in new
chr17	78674047	78782294	chr17:78674047-78782294	1	-	78676090	78782223	0	13	2122,155,72,79,113,149,113,81,119,67,65,83,93,	0,6142,6923,18369,24220,24772,26283,27623,28074,28490,34149,35602,108154,
#Partially deleted in new
chr17	78674047	78782294	chr17:78674047-78782294	1	-	78676090	78782223	0	14	2122,155,72,77,3,112,149,113,81,119,67,65,83,93,	0,6142,6923,18369,21959,24221,24772,26283,27623,28074,28490,34149,35602,108154,
#Partially deleted in new
chr17	78674047	78717025	chr17:78674047-78717025	1	-	78676090	78702597	0	14	2122,155,72,77,3,112,149,113,81,119,67,65,83,97,	0,6142,6923,18369,21959,24221,24772,26283,27623,28074,28490,34149,35602,42881,
#Partially deleted in new
chr17	78674047	78782297	chr17:78674047-78782297	1	-	78675937	78782223	789624	4	1915,65,83,96,	0,34149,35602,108154,
#Partially deleted in new
chr17	78674047	78723750	chr17:78674047-78723750	1	-	78676090	78702597	0	14	2122,155,72,77,3,112,149,113,81,119,67,65,83,538,	0,6142,6923,18369,21959,24221,24772,26283,27623,28074,28490,34149,35602,49165,
#Partially deleted in new
chr17	78674047	78782272	chr17:78674047-78782272	3	-	78676090	78782223	0	13	2122,155,72,77,112,149,113,81,119,67,65,83,71,	0,6142,6923,18369,24221,24772,26283,27623,28074,28490,34149,35602,108154,
#Deleted in new
chr17	78674048	78678471	chr17:78674048-78678471	0	-	78674048	78674048	8553170	1	4423,	0,
#Partially deleted in new
chr17	78675655	78692493	chr17:78675655-78692493	0	-	78675655	78675655	8553170	5	514,56,155,72,77,	0,1339,4534,5315,16761,
#Partially deleted in new
chr17	78675819	78782289	chr17:78675819-78782289	0	-	78708247	78782223	789624	8	350,155,72,113,81,119,65,88,	0,4370,5151,24511,25851,26302,32377,106382,
#Partially deleted in new
chr17	78675847	78681066	chr17:78675847-78681066	0	-	78675847	78675847	8553170	3	322,155,96,	0,4342,5123,
#Partially deleted in new
chr17	78676118	78723566	chr17:78676118-78723566	0	-	78676118	78676118	8553170	5	51,29,65,83,354,	0,4071,32078,33531,47094,
#Deleted in new
chr17	78691265	78691979	chr17:78691265-78691979	3	-	78691265	78691265	8553170	1	714,	0,
#Deleted in new
chr17	78696693	78696797	chr17:78696693-78696797	3	-	78696693	78696693	8553170	1	104,	0,
#Partially deleted in new
chr17	78698268	78736890	chr17:78698268-78736890	0	-	78698268	78736719	789624	9	112,149,113,81,119,67,65,83,199,	0,551,2062,3402,3853,4269,9928,11381,38423,
#Partially deleted in new
chr17	78700330	78727965	chr17:78700330-78727965	0	-	78700330	78727712	789624	7	113,81,119,67,65,83,308,	0,1340,1791,2207,7866,9319,27327,
#Partially deleted in new
chr17	78700391	78723564	chr17:78700391-78723564	0	-	78700391	78702597	789624	6	52,81,119,67,65,169,	0,1279,1730,2146,7805,23004,
#Partially deleted in new
chr17	78701671	78724046	chr17:78701671-78724046	0	-	78701671	78702597	789624	6	80,119,67,65,83,154,	0,450,866,6525,7978,22221,
#Partially deleted in new
chr17	78708911	78736967	chr17:78708911-78736967	0	-	78708911	78708911	8553170	2	821,276,	0,27780,
#Partially deleted in new
chr17	78709350	78782273	chr17:78709350-78782273	0	-	78709350	78709350	8553170	2	382,72,	0,72851,
#Partially deleted in new
chr17	78787380	78798990	chr17:78787380-78798990	0	-	78798419	78798990	789624	4	278,94,152,83,	0,10405,11019,11527,
#Partially deleted in new
chr17	78787380	78799722	chr17:78787380-78799722	0	-	78798419	78799722	789624	4	278,152,116,56,	0,11019,11527,12286,
#Partially deleted in new
chr17	78787465	78798455	chr17:78787465-78798455	0	-	78798419	78798455	789624	3	193,178,56,	0,8851,10934,
#Partially deleted in new
chr17	78787466	78840780	chr17:78787466-78840780	0	-	78798419	78836363	789624	21	192,2235,116,102,212,594,131,678,142,101,141,112,83,71,68,103,111,222,262,164,45,	0,8850,11441,12200,14857,15918,18689,19492,25393,26306,26945,31200,32463,33524,34470,39778,41430,47813,48644,51120,53269,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	78791862	78798492	chr17:78791862-78798492	0	-	78798419	78798492	789624	4	218,178,117,93,	0,4454,5923,6537,
#Deleted in new
chr17	78795651	78797061	chr17:78795651-78797061	0	-	78795651	78795651	8553170	2	191,215,	0,1195,
#Partially deleted in new
chr17	78795652	78840670	chr17:78795652-78840670	3	-	78798419	78836363	789624	21	2227,152,116,102,212,594,131,678,142,101,141,112,83,71,68,103,111,222,262,164,271,	0,2747,3255,4014,6671,7732,10503,11306,17207,18120,18759,23014,24277,25338,26284,31592,33244,39627,40458,42934,44747,
#Deleted in new
chr17	78795652	78798984	chr17:78795652-78798984	0	-	78798419	78798984	789624	3	2250,152,77,	0,2747,3255,
#Partially deleted in new
chr17	78796882	78840887	chr17:78796882-78840887	1	-	78798419	78836363	789624	20	1669,116,102,212,594,131,678,142,101,141,112,83,71,68,103,111,222,262,164,152,	0,2025,2784,5441,6502,9273,10076,15977,16890,17529,21784,23047,24108,25054,30362,32014,38397,39228,41704,43853,
#Partially deleted in new
chr17	78802460	78840864	chr17:78802460-78840864	0	-	78802460	78836363	789624	17	75,594,131,678,142,101,141,112,83,71,68,103,111,222,262,164,129,	0,924,3695,4498,10399,11312,11951,16206,17469,18530,19476,24784,26436,32819,33650,36126,38275,
#Partially deleted in new
chr17	78807254	78836363	chr17:78807254-78836363	1	-	78807254	78836363	789624	13	24,216,142,101,141,112,83,71,68,103,111,222,253,	0,166,5605,6518,7157,11412,12675,13736,14682,19990,21642,28025,28856,
#Partially deleted in new
chr17	78807612	78819097	chr17:78807612-78819097	0	-	78807612	78807612	8553170	6	24,142,101,141,112,69,	0,5247,6160,6799,11054,11416,
#Partially deleted in new
chr17	78812859	78828964	chr17:78812859-78828964	0	-	78812859	78823171	789624	10	142,101,141,112,83,71,68,71,103,68,	0,913,1552,5807,7070,8131,9077,10253,14385,16037,
#Partially deleted in new
chr17	78812971	78818943	chr17:78812971-78818943	0	-	78812971	78812971	8553170	4	30,101,141,277,	0,801,1440,5695,
#Partially deleted in new
chr17	78818666	78821360	chr17:78818666-78821360	0	-	78818666	78818666	8553170	3	112,83,370,	0,1263,2324,
#Partially deleted in new
chr17	78823121	78840781	chr17:78823121-78840781	1	-	78823167	78836363	789624	7	62,103,111,222,262,164,46,	0,4123,5775,12158,12989,15465,17614,
#Partially deleted in new
chr17	78826472	78840872	chr17:78826472-78840872	1	-	78827075	78836363	789624	6	875,111,222,262,164,137,	0,2424,8807,9638,12114,14263,
#Partially deleted in new
chr17	78828945	78840713	chr17:78828945-78840713	0	-	78828945	78836363	789624	5	62,222,262,164,188,	0,6334,7165,9641,11580,
#Partially deleted in new
chr17	78828991	78840786	chr17:78828991-78840786	0	-	78835417	78836363	789624	5	16,222,111,164,51,	0,6288,7270,9595,11744,
#Partially deleted in new
chr17	78829003	78838794	chr17:78829003-78838794	0	-	78829003	78836363	789624	4	4,222,262,208,	0,6276,7107,9583,
#Partially deleted in new
chr17	78836024	78840766	chr17:78836024-78840766	0	-	78836024	78836024	8553170	3	348,164,31,	0,2562,4711,
#Partially deleted in new
chr17	78836123	78841441	chr17:78836123-78841441	0	-	78836123	78836363	789624	3	249,164,181,	0,2463,5137,
#Partially deleted in new
chr17	78836163	78840647	chr17:78836163-78840647	0	-	78836163	78836363	789624	3	209,164,306,	0,2423,4178,
#Partially deleted in new
chr17	78836205	78841225	chr17:78836205-78841225	0	-	78836205	78836363	789624	3	167,164,215,	0,2381,4805,
#Partially deleted in new
chr17	78845952	78846868	chr17:78845952-78846868	7	-	78845952	78845952	16724991	2	481,112,	0,804,
#Partially deleted in new
chr17	78852976	78925387	chr17:78852976-78925387	3	-	78855666	78925088	0	5	2888,125,109,101,429,	0,4545,17921,20842,71982,
#Partially deleted in new
chr17	78852976	78922401	chr17:78852976-78922401	1	-	78855666	78871006	789624	5	2888,125,109,101,192,	0,4545,17921,20842,69233,
#Partially deleted in new
chr17	78852976	78874150	chr17:78852976-78874150	1	-	78855666	78871006	789624	5	2888,125,109,101,122,	0,4545,17921,20842,21052,
#Partially deleted in new
chr17	78852980	78874089	chr17:78852980-78874089	1	-	78855666	78871006	789624	4	2884,125,109,271,	0,4541,17917,20838,
#Partially deleted in new
chr17	78855477	78855844	chr17:78855477-78855844	3	+	78855477	78855477	8553170	1	367,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	78855541	78874136	chr17:78855541-78874136	0	-	78857425	78871006	789624	4	323,1683,109,318,	0,422,15356,18277,
#Partially deleted in new
chr17	78870909	78903215	chr17:78870909-78903215	0	-	78870909	78871006	789624	5	97,101,289,142,82,	0,2909,30059,30875,32224,
#Partially deleted in new
chr17	78890579	78903201	chr17:78890579-78903201	3	-	78890637	78901828	789624	3	1880,142,68,	0,11205,12554,
#Partially deleted in new
chr17	78890637	78901828	chr17:78890637-78901828	1	-	78890637	78901828	789624	2	1822,44,	0,11147,
#Partially deleted in new
chr17	78892164	78903217	chr17:78892164-78903217	0	-	78892164	78892164	8553170	3	356,142,84,	0,9620,10969,
#Partially deleted in new
chr17	78892268	78903199	chr17:78892268-78903199	0	-	78892268	78892268	8553170	4	252,142,104,66,	0,9516,10399,10865,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	78897263	78900152	chr17:78897263-78900152	3	+	78897263	78897263	8553170	1	2889,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	78903262	78905024	chr17:78903262-78905024	3	+	78903262	78903262	8553170	2	37,908,	0,854,
#Partially deleted in new
chr17	78971237	78980109	chr17:78971237-78980109	3	-	78971575	78977191	0	6	1467,253,132,192,75,286,	0,1732,3450,4727,5902,8586,
#Partially deleted in new
chr17	78971237	78979918	chr17:78971237-78979918	1	-	78972462	78977191	789624	5	1467,132,192,75,95,	0,3450,4727,5902,8586,
#Partially deleted in new
chr17	78971255	78979923	chr17:78971255-78979923	0	-	78973155	78977191	789624	5	1449,206,75,75,100,	0,1714,4826,5884,8568,
#Partially deleted in new
chr17	78971284	78979908	chr17:78971284-78979908	0	-	78973120	78977191	789624	4	1420,156,75,85,	0,1685,5855,8539,
#Partially deleted in new
chr17	78971330	78979923	chr17:78971330-78979923	0	-	78973221	78977191	789624	6	1374,253,85,204,75,100,	0,1639,3357,4622,5809,8493,
#Deleted in new
chr17	78972385	78974997	chr17:78972385-78974997	0	-	78972385	78972385	8553170	3	319,253,310,	0,584,2302,
#Partially deleted in new
chr17	78972469	78979947	chr17:78972469-78979947	0	-	78973323	78977191	789624	6	235,374,132,192,75,124,	0,500,2218,3495,4670,7354,
#Partially deleted in new
chr17	78972556	78977323	chr17:78972556-78977323	0	-	78972556	78977191	789624	6	148,253,132,192,75,18,	0,413,2131,3408,4583,4749,
#Partially deleted in new
chr17	78972647	78976156	chr17:78972647-78976156	0	-	78972647	78972647	8553170	3	696,132,192,	0,2040,3317,
#Deleted in new
chr17	78972768	78974796	chr17:78972768-78974796	0	-	78972768	78972768	8553170	2	447,109,	0,1919,
#Partially deleted in new
chr17	78972797	78979935	chr17:78972797-78979935	1	-	78972965	78977191	789624	5	425,132,192,75,112,	0,1890,3167,4342,7026,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	78972969	78979923	chr17:78972969-78979923	0	-	78972969	78977191	789624	6	253,132,192,75,141,100,	0,1718,2995,4170,6476,6854,
#Partially deleted in new
chr17	78972974	78979908	chr17:78972974-78979908	0	-	78972974	78977191	789624	4	248,132,75,85,	0,1713,4165,6849,
#Partially deleted in new
chr17	78972999	78979911	chr17:78972999-78979911	0	-	78976140	78977191	789624	6	223,132,192,58,75,88,	0,1688,2965,3943,4140,6824,
#Partially deleted in new
chr17	78973187	78977216	chr17:78973187-78977216	0	-	78977002	78977191	789624	4	35,132,192,222,	0,1500,2777,3807,
#Partially deleted in new
chr17	78974630	78979927	chr17:78974630-78979927	0	-	78976140	78977191	789624	5	189,192,58,75,104,	0,1334,2312,2509,5193,
#Partially deleted in new
chr17	78974631	78979891	chr17:78974631-78979891	0	-	78977002	78977191	789624	4	188,192,220,68,	0,1333,2363,5192,
#Partially deleted in new
chr17	78974797	78979843	chr17:78974797-78979843	0	-	78974797	78977191	789624	5	22,192,75,70,20,	0,1167,2342,2606,5026,
#Partially deleted in new
chr17	78976824	78979875	chr17:78976824-78979875	0	-	78976824	78976824	8553170	2	390,52,	0,2999,
#Partially deleted in new
chr17	78991716	79009817	chr17:78991716-79009817	3	-	78993549	78997622	0	4	2204,204,972,154,	0,3301,5275,17947,
#Partially deleted in new
chr17	78991716	79009730	chr17:78991716-79009730	1	-	78993549	78997622	0	5	2204,204,653,124,67,	0,3301,5275,6123,17947,
#Partially deleted in new
chr17	78991716	78998293	chr17:78991716-78998293	1	-	78993549	78997622	0	4	2204,204,783,146,	0,3301,5275,6431,
#Partially deleted in new
chr17	78991719	79009767	chr17:78991719-79009767	0	-	78992613	78997622	789624	4	421,352,669,104,	0,690,5256,17944,
#Partially deleted in new
chr17	78993486	79009778	chr17:78993486-79009778	1	-	78993549	78997622	0	6	434,204,653,124,139,115,	0,1531,3505,4353,4661,16177,
#Partially deleted in new
chr17	78993783	78995249	chr17:78993783-78995249	0	-	78993783	78993783	8553170	2	137,232,	0,1234,
#Partially deleted in new
chr17	78997105	79009780	chr17:78997105-79009780	0	-	78997105	78997622	789624	6	224,154,124,171,110,117,	0,385,734,2994,8266,12558,
#Partially deleted in new
chr17	78997392	79009802	chr17:78997392-79009802	0	-	78997392	78997622	789624	3	571,171,139,	0,2707,12271,
#Partially deleted in new
chr17	78997426	79009764	chr17:78997426-79009764	0	-	78997426	78997622	789624	4	218,124,171,101,	0,413,2673,12237,
#Partially deleted in new
chr17	78997439	79009793	chr17:78997439-79009793	0	-	78997439	78997622	789624	5	205,124,139,171,130,	0,400,708,2660,12224,
#Partially deleted in new
chr17	78997506	79009867	chr17:78997506-79009867	0	-	78997506	78997622	789624	3	138,124,204,	0,333,12157,
#Partially deleted in new
chr17	78997506	79009793	chr17:78997506-79009793	0	-	78997506	78997622	789624	4	138,124,110,130,	0,333,7865,12157,
#Partially deleted in new
chr17	78997576	79009765	chr17:78997576-79009765	0	-	78997576	78997622	789624	3	387,110,102,	0,7795,12087,
#Partially deleted in new
chr17	78997665	79006213	chr17:78997665-79006213	0	-	78997665	78997665	8553170	2	298,257,	0,8291,
#Partially deleted in new
chr17	78998147	79009793	chr17:78998147-79009793	0	-	78998147	78998147	8553170	4	139,171,110,130,	0,1952,7224,11516,
#Partially deleted in new
chr17	78998228	79009793	chr17:78998228-79009793	0	-	78998228	78998228	8553170	5	58,171,110,109,130,	0,1871,7143,9834,11435,
#Partially deleted in new
chr17	79019208	79027601	chr17:79019208-79027601	3	-	79019208	79019208	789624	3	408,231,226,	0,797,8167,
#Partially deleted in new
chr17	79019591	79027655	chr17:79019591-79027655	0	-	79019591	79019591	8553170	3	25,278,280,	0,367,7784,
#Partially deleted in new
chr17	79022813	79048247	chr17:79022813-79048247	1	+	79046645	79048088	789624	4	275,169,140,710,	0,21141,23741,24724,
#Partially deleted in new
chr17	79022933	79049787	chr17:79022933-79049787	3	+	79043968	79048088	789624	4	155,169,140,2250,	0,21021,23621,24604,
#Partially deleted in new
chr17	79022970	79048247	chr17:79022970-79048247	1	+	79043968	79048088	789624	5	118,259,169,140,710,	0,1265,20984,23584,24567,
#Partially deleted in new
chr17	79024069	79048475	chr17:79024069-79048475	1	+	79043968	79048088	789624	4	425,169,140,938,	0,19885,22485,23468,
#Deleted in new
chr17	79024168	79025052	chr17:79024168-79025052	0	+	79024168	79024168	8553170	2	326,191,	0,693,
#Partially deleted in new
chr17	79024170	79049787	chr17:79024170-79049787	1	+	79043968	79048088	789624	5	324,217,169,140,2250,	0,10146,19784,22384,23367,
#Partially deleted in new
chr17	79024260	79049787	chr17:79024260-79049787	1	+	79046645	79048088	789624	3	234,140,2250,	0,22294,23277,
#Partially deleted in new
chr17	79025662	79049788	chr17:79025662-79049788	1	+	79043968	79048088	789624	4	273,169,140,2251,	0,18292,20892,21875,
#Partially deleted in new
chr17	79034184	79048247	chr17:79034184-79048247	1	+	79043968	79048088	789624	4	349,169,140,710,	0,9770,12370,13353,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	79041725	79048247	chr17:79041725-79048247	1	+	79043968	79048088	789624	4	110,169,140,710,	0,2229,4829,5812,
#Partially deleted in new
chr17	79043592	79048466	chr17:79043592-79048466	1	+	79043968	79048088	789624	3	531,140,929,	0,2962,3945,
#Partially deleted in new
chr17	79046900	79048316	chr17:79046900-79048316	0	+	79046900	79046900	8553170	2	309,779,	0,637,
#Partially deleted in new
chr17	79074938	79082549	chr17:79074938-79082549	0	+	79074944	79080231	789624	6	152,68,202,158,149,652,	0,2491,2724,5268,5986,6959,
#Partially deleted in new
chr17	79074944	79086696	chr17:79074944-79086696	3	+	79074944	79086349	789624	14	146,68,202,149,158,149,166,104,109,191,149,109,115,764,	0,2485,2718,4544,5262,5980,6953,8075,8537,8816,9593,10289,10675,10988,
#Partially deleted in new
chr17	79075068	79082530	chr17:79075068-79082530	0	+	79075068	79082246	789624	7	22,68,202,149,158,149,633,	0,2361,2594,4420,5138,5856,6829,
#Partially deleted in new
chr17	79080311	79088599	chr17:79080311-79088599	0	+	79080311	79082246	789624	10	53,149,980,104,109,191,149,109,115,2667,	0,613,1586,2708,3170,3449,4226,4922,5308,5621,
#Partially deleted in new
chr17	79081019	79082314	chr17:79081019-79082314	0	+	79081019	79081019	8553170	2	54,417,	0,878,
#Deleted in new
chr17	79082028	79084566	chr17:79082028-79084566	0	+	79082028	79082028	8553170	5	35,104,109,171,29,	0,991,1453,1732,2509,
#Deleted in new
chr17	79083085	79084234	chr17:79083085-79084234	0	+	79083085	79083085	8553170	3	38,109,474,	0,396,675,
#Deleted in new
chr17	79083300	79083951	chr17:79083300-79083951	0	+	79083300	79083300	8553170	2	290,191,	0,460,
#Deleted in new
chr17	79084246	79086696	chr17:79084246-79086696	0	+	79084246	79084246	8553170	4	440,109,115,764,	0,987,1373,1686,
#Deleted in new
chr17	79085289	79085850	chr17:79085289-79085850	0	+	79085289	79085289	8553170	2	53,231,	0,330,
#Partially deleted in new
chr17	79089344	79482598	chr17:79089344-79482598	1	-	79090882	79115715	789624	14	1541,79,62,181,133,54,61,93,54,135,255,40,101,145,	0,5106,6168,7308,7947,8347,12239,13817,14728,17306,26149,146421,218379,393109,
#Partially deleted in new
chr17	79089366	79115580	chr17:79089366-79115580	0	-	79090882	79115580	8553170	11	1519,79,62,181,133,54,61,93,54,138,87,	0,5084,6146,7286,7925,8325,12217,13795,14706,17284,26127,
#Partially deleted in new
chr17	79090799	79235805	chr17:79090799-79235805	1	-	79090882	79115715	789624	11	86,79,62,181,133,54,61,54,138,255,40,	0,3651,4713,5853,6492,6892,10784,13273,15851,24694,144966,
#Partially deleted in new
chr17	79090815	79516148	chr17:79090815-79516148	3	-	79090882	79115715	789624	15	70,79,62,40,133,54,61,93,54,138,255,40,101,145,194,	0,3635,4697,5837,6476,6876,10768,12346,13257,15835,24678,144950,216908,391638,425139,
#Deleted in new
chr17	79090815	79098508	chr17:79090815-79098508	0	-	79090815	79090815	8553170	6	70,79,62,40,133,817,	0,3635,4697,5837,6476,6876,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	79090846	79100410	chr17:79090846-79100410	0	-	79090846	79090846	8553170	6	39,79,62,40,133,2719,	0,3604,4666,5806,6445,6845,
#Deleted in new
chr17	79091946	79096693	chr17:79091946-79096693	0	-	79092596	79096693	789624	4	695,79,62,41,	0,2504,3566,4706,
#Deleted in new
chr17	79092379	79097726	chr17:79092379-79097726	0	-	79092596	79097726	789624	6	262,79,62,40,133,35,	0,2071,3133,4273,4912,5312,
#Partially deleted in new
chr17	79094256	79508868	chr17:79094256-79508868	1	-	79094408	79115715	789624	14	273,62,40,133,54,61,93,54,138,255,40,101,145,98,	0,1256,2396,3035,3435,7327,8905,9816,12394,21237,141509,213467,388197,414514,
#Partially deleted in new
chr17	79115697	79183472	chr17:79115697-79183472	0	-	79115697	79183368	789624	2	51,209,	0,67566,
#Partially deleted in new
chr17	79115702	79208556	chr17:79115702-79208556	0	-	79115702	79115715	8553170	2	46,108,	0,92746,
#Partially deleted in new
chr17	79132721	79136402	chr17:79132721-79136402	3	+	79132721	79132721	8553170	3	108,54,385,	0,2311,3296,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	79233626	79424120	chr17:79233626-79424120	0	-	79233626	79233626	8553170	3	2179,101,414,	0,74097,190080,
#Partially deleted in new
chr17	79298203	79307827	chr17:79298203-79307827	0	-	79298203	79298203	8553170	2	217,104,	0,9520,
#Partially deleted in new
chr17	79598031	79603921	chr17:79598031-79603921	3	-	79598031	79598031	8553170	2	4043,161,	0,5729,
#Deleted in new
chr17	79598617	79601292	chr17:79598617-79601292	0	-	79598617	79598617	8553170	1	2675,	0,
#Partially deleted in new
chr17	79707175	79707249	chr17:79707175-79707249	3	-	79707175	79707175	5263520	1	74,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	79707265	79712317	chr17:79707265-79712317	3	+	79707265	79707265	789624	2	391,3846,	0,1206,
#Partially deleted in new
chr17	79730918	79742222	chr17:79730918-79742222	3	+	79731139	79738046	789624	6	474,146,627,220,147,429,	0,2589,4124,6122,6997,10875,
#Partially deleted in new
chr17	79735540	79739568	chr17:79735540-79739568	0	+	79735540	79738046	789624	3	129,220,1653,	0,1500,2375,
#Partially deleted in new
chr17	79778131	79787983	chr17:79778131-79787983	3	+	79778235	79785042	0	5	176,44,66,106,4252,	0,252,1230,3564,5600,
#Deleted in new
chr17	79778162	79779739	chr17:79778162-79779739	0	+	79778162	79778162	8553170	3	145,44,378,	0,221,1199,
#Deleted in new
chr17	79778193	79782532	chr17:79778193-79782532	1	+	79778235	79782149	0	4	114,44,66,837,	0,190,1168,3502,
#Deleted in new
chr17	79792131	79797116	chr17:79792131-79797116	3	-	79794634	79796998	0	5	3427,67,66,44,187,	0,3925,4118,4365,4798,
#Deleted in new
chr17	79795048	79798331	chr17:79795048-79798331	0	-	79795048	79798280	789624	5	510,67,66,44,90,	0,1008,1201,1448,3193,
#Deleted in new
chr17	79795203	79801533	chr17:79795203-79801533	0	-	79795203	79796534	789624	5	355,67,66,44,133,	0,853,1046,1293,6197,
#Deleted in new
chr17	79795393	79801683	chr17:79795393-79801683	0	-	79795393	79795393	8553170	4	165,67,66,283,	0,663,856,6007,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	79800597	79802529	chr17:79800597-79802529	3	+	79800597	79800597	8553170	2	28,579,	0,1353,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	79823451	79827704	chr17:79823451-79827704	3	+	79823451	79823451	789624	3	87,80,1621,	0,343,2632,
#Deleted in new
chr17	79833155	79839429	chr17:79833155-79839429	3	-	79833958	79839251	0	5	2240,67,66,44,247,	0,2490,4681,5855,6027,
#Deleted in new
chr17	79835043	79839387	chr17:79835043-79839387	1	-	79835692	79839251	789624	5	352,51,66,44,205,	0,602,2793,3967,4139,
#Deleted in new
chr17	79835142	79837881	chr17:79835142-79837881	0	-	79835361	79837881	789624	3	378,67,45,	0,503,2694,
#Deleted in new
chr17	79837745	79839413	chr17:79837745-79839413	0	-	79837745	79837745	8553170	3	157,44,231,	0,1265,1437,
#Deleted in new
chr17	79848057	79850110	chr17:79848057-79850110	3	-	79848057	79848057	8553170	2	111,213,	0,1840,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	79915251	79926725	chr17:79915251-79926725	3	-	79915251	79915251	789624	6	162,3650,223,153,58,1025,	0,935,6152,6698,9762,10449,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	79919356	79924010	chr17:79919356-79924010	3	+	79919356	79919356	789624	2	220,1320,	0,3334,
#Partially deleted in new
chr17	79919373	79925462	chr17:79919373-79925462	0	+	79919373	79919373	8553170	2	203,337,	0,5752,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	79932342	80035848	chr17:79932342-80035848	3	-	79940858	80013547	789624	12	8765,147,180,187,135,149,168,148,162,598,243,54,	0,9717,12565,15302,16529,17374,18068,19107,20314,77817,81024,103452,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	79935791	79950857	chr17:79935791-79950857	1	-	79940858	79950761	789624	8	5316,147,180,187,135,107,168,102,	0,6268,9116,11853,13080,13925,14619,14964,
#Partially deleted in new
chr17	79937907	79950836	chr17:79937907-79950836	1	-	79940858	79950761	789624	8	3200,147,180,187,135,149,165,81,	0,4152,7000,9737,10964,11809,12503,12848,
#Partially deleted in new
chr17	79943855	79950828	chr17:79943855-79950828	1	-	79944092	79950761	789624	7	252,180,187,135,149,165,73,	0,1052,3789,5016,5861,6555,6900,
#Partially deleted in new
chr17	79944044	79950834	chr17:79944044-79950834	1	-	79944092	79950761	789624	7	63,180,187,135,149,168,79,	0,863,3600,4827,5672,6366,6711,
#Partially deleted in new
chr17	79947644	79952013	chr17:79947644-79952013	0	-	79947644	79952013	789624	6	187,135,107,165,148,28,	0,1227,2072,2766,3805,4341,
#Partially deleted in new
chr17	79947647	79950830	chr17:79947647-79950830	0	-	79947647	79950554	789624	5	184,135,107,184,75,	0,1224,2069,2763,3108,
#Partially deleted in new
chr17	79947694	79950833	chr17:79947694-79950833	0	-	79947694	79950554	789624	5	137,135,149,184,78,	0,1177,2022,2716,3061,
#Partially deleted in new
chr17	79950570	79993634	chr17:79950570-79993634	0	-	79950570	79952682	789624	5	8,148,210,162,39,	0,879,1415,2086,43025,
#Deleted in new
chr17	79952662	79952992	chr17:79952662-79952992	3	+	79952662	79952662	8553170	1	330,	0,
#Deleted in new
chr17	79991943	79992841	chr17:79991943-79992841	3	-	79991943	79991943	8553170	2	400,43,	0,855,
#Deleted in new
chr17	80023893	80026107	chr17:80023893-80026107	3	+	80023893	80023893	8553170	2	121,294,	0,1920,
#Deleted in new
chr17	80023930	80026107	chr17:80023930-80026107	0	+	80023930	80023930	8553170	2	84,297,	0,1880,
#Partially deleted in new
chr17	80036631	80090819	chr17:80036631-80090819	1	+	80036662	80090399	789624	18	60,64,459,124,179,84,220,158,123,122,244,183,246,214,170,92,121,681,	0,1491,3180,10647,11951,13274,13432,21862,22226,28853,44914,45244,48111,49371,50975,51379,53132,53507,
#Partially deleted in new
chr17	80036635	80100613	chr17:80036635-80100613	3	+	80036662	80099775	789624	20	56,64,459,124,179,84,220,158,123,122,244,183,246,214,170,92,121,189,159,1087,	0,1487,3176,10643,11947,13270,13428,21858,22222,28849,44910,45240,48107,49367,50971,51375,53128,58627,60609,62891,
#Partially deleted in new
chr17	80036651	80067901	chr17:80036651-80067901	1	+	80036662	80067682	789624	11	40,64,459,124,179,84,220,158,123,122,397,	0,1471,3160,10627,11931,13254,13412,21842,22206,28833,30853,
#Partially deleted in new
chr17	80036651	80040165	chr17:80036651-80040165	0	+	80036651	80036651	8553170	2	106,354,	0,3160,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	80036657	80066770	chr17:80036657-80066770	1	+	80036662	80066202	789624	9	34,64,459,124,179,84,220,158,688,	0,1465,3154,10621,11925,13248,13406,21836,29425,
#Partially deleted in new
chr17	80036660	80040187	chr17:80036660-80040187	0	+	80038183	80040187	789624	3	97,64,376,	0,1462,3151,
#Partially deleted in new
chr17	80036660	80040105	chr17:80036660-80040105	0	+	80038183	80040105	789624	4	31,77,64,294,	0,1291,1462,3151,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	80036663	80040535	chr17:80036663-80040535	0	+	80036663	80036663	8553170	3	28,64,724,	0,1459,3148,
#Partially deleted in new
chr17	80036676	80047454	chr17:80036676-80047454	0	+	80036676	80036676	8553170	4	15,64,459,176,	0,1446,3135,10602,
#Partially deleted in new
chr17	80040004	80050224	chr17:80040004-80050224	0	+	80040004	80048709	789624	5	36,94,179,84,161,	0,7304,8578,9901,10059,
#Partially deleted in new
chr17	80048369	80100604	chr17:80048369-80100604	0	+	80048369	80048369	8553170	16	392,84,220,158,123,122,244,183,246,214,170,92,121,189,159,1078,	0,1536,1694,10124,10488,17115,33176,33506,36373,37633,39237,39641,41394,46893,48875,51157,
#Partially deleted in new
chr17	80058924	80067288	chr17:80058924-80067288	0	+	80058924	80066946	789624	3	56,122,415,	0,6560,7949,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	80081442	80097934	chr17:80081442-80097934	0	+	80081442	80081442	8553170	6	616,246,2100,121,189,690,	0,3300,4560,8321,13820,15802,
#Partially deleted in new
chr17	80087513	80095337	chr17:80087513-80095337	0	+	80087513	80087513	8553170	4	263,92,121,75,	0,497,2250,7749,
#Partially deleted in new
chr17	80087702	80088212	chr17:80087702-80088212	0	+	80087702	80087702	8553170	2	124,202,	0,308,
#Partially deleted in new
chr17	80101555	80107718	chr17:80101555-80107718	0	+	80104586	80107718	789624	4	70,578,146,162,	0,2999,4193,6001,
#Partially deleted in new
chr17	80101586	80105828	chr17:80101586-80105828	0	+	80104586	80105828	789624	4	39,115,578,80,	0,224,2968,4162,
#Partially deleted in new
chr17	80101593	80119877	chr17:80101593-80119877	3	+	80104586	80119331	0	21	32,80,578,146,166,97,120,119,132,111,114,85,118,134,152,149,142,150,165,153,606,	0,217,2961,4155,5963,6206,6696,6895,7103,8351,9133,9347,10389,10984,11282,11624,15374,16006,16599,17059,17678,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	80101596	80102733	chr17:80101596-80102733	0	+	80101596	80101596	789624	2	29,923,	0,214,
#Partially deleted in new
chr17	80101703	80119879	chr17:80101703-80119879	1	+	80104586	80119331	0	20	187,578,146,166,97,120,119,132,111,114,85,118,134,152,149,142,150,165,153,608,	0,2851,4045,5853,6096,6586,6785,6993,8241,9023,9237,10279,10874,11172,11514,15264,15896,16489,16949,17568,
#Partially deleted in new
chr17	80111001	80117082	chr17:80111001-80117082	0	+	80111001	80112849	789624	6	24,118,134,183,149,115,	0,981,1576,1843,2216,5966,
#Deleted in new
chr17	80111732	80112948	chr17:80111732-80112948	0	+	80111732	80111732	8553170	3	368,134,73,	0,845,1143,
#Deleted in new
chr17	80112383	80113271	chr17:80112383-80113271	0	+	80112383	80112383	8553170	3	328,152,54,	0,492,834,
#Deleted in new
chr17	80116825	80119275	chr17:80116825-80119275	0	+	80116825	80116825	8553170	5	284,150,165,153,4,	0,774,1367,1827,2446,
#Partially deleted in new
chr17	80135213	80147183	chr17:80135213-80147183	3	-	80135489	80146961	0	12	293,128,108,116,139,142,81,133,63,67,73,391,	0,790,1014,2172,2928,3807,4456,4794,6105,6568,8958,11579,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	80135254	80139487	chr17:80135254-80139487	0	-	80135254	80135254	8553170	2	2247,1346,	0,2887,
#Partially deleted in new
chr17	80135254	80147108	chr17:80135254-80147108	1	-	80135489	80146961	789624	12	252,128,108,116,139,142,81,133,63,67,73,316,	0,749,973,2131,2887,3766,4415,4753,6064,6527,8917,11538,
#Partially deleted in new
chr17	80135263	80136322	chr17:80135263-80136322	0	-	80135263	80135263	8553170	2	243,319,	0,740,
#Partially deleted in new
chr17	80135263	80137603	chr17:80135263-80137603	0	-	80135263	80135263	8553170	4	243,128,108,218,	0,740,964,2122,
#Partially deleted in new
chr17	80135298	80147151	chr17:80135298-80147151	1	-	80135489	80146961	789624	13	208,128,108,116,139,142,81,133,63,67,73,230,91,	0,705,929,2087,2843,3722,4371,4709,6020,6483,8873,11494,11762,
#Partially deleted in new
chr17	80135348	80147139	chr17:80135348-80147139	1	-	80135489	80146961	789624	11	158,128,108,116,139,142,81,133,67,73,347,	0,655,879,2037,2793,3672,4321,4659,6433,8823,11444,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	80136802	80138273	chr17:80136802-80138273	0	-	80136802	80136802	8553170	2	699,132,	0,1339,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	80139685	80140476	chr17:80139685-80140476	0	-	80139685	80139685	8553170	2	65,469,	0,322,
#Partially deleted in new
chr17	80141694	80147139	chr17:80141694-80147139	0	-	80141694	80141694	8553170	3	154,73,347,	0,2477,5098,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	80147249	80148596	chr17:80147249-80148596	3	+	80147249	80147249	8553170	1	1347,	0,
#Partially deleted in new
chr17	80149626	80149798	chr17:80149626-80149798	3	+	80149626	80149626	8553170	1	172,	0,
#Partially deleted in new
chr17	80169991	80181569	chr17:80169991-80181569	0	+	80181438	80181569	789624	4	65,148,198,151,	0,8516,9112,11427,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	80170002	80179133	chr17:80170002-80179133	0	+	80170002	80170002	8553170	4	54,323,148,30,	0,2903,8505,9101,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr17	80170011	80209331	chr17:80170011-80209331	3	+	80181438	80208345	789624	23	45,323,148,231,138,326,168,120,126,150,117,143,95,64,193,127,241,64,115,171,122,116,1194,	0,2894,8496,11407,12641,13901,18365,19741,20762,21311,22491,25179,25546,28087,28387,31732,32168,33810,34215,35023,35519,36958,38126,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr17	80170029	80209331	chr17:80170029-80209331	1	+	80181438	80208345	8553170	23	27,323,148,231,138,326,168,120,126,150,117,143,95,64,193,127,241,64,115,171,122,116,1194,	0,2876,8478,11389,12623,13883,18347,19723,20744,21293,22473,25161,25528,28069,28369,31714,32150,33792,34197,35005,35501,36940,38108,
#Partially deleted in new
chr17	80170033	80181649	chr17:80170033-80181649	0	+	80181438	80181649	789624	4	23,130,198,231,	0,8492,9070,11385,
#Partially deleted in new
chr17	80170033	80208963	chr17:80170033-80208963	0	+	80181438	80195608	789624	22	23,148,231,138,326,168,120,58,150,117,143,95,64,193,127,241,64,125,171,122,116,826,	0,8474,11385,12619,13879,18343,19719,20808,21289,22469,25157,25524,28065,28365,31710,32146,33788,34193,35001,35497,36936,38104,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	80170276	80178655	chr17:80170276-80178655	0	+	80170276	80170276	8553170	3	258,323,130,	0,2629,8249,
#Partially deleted in new
chr17	80178498	80202631	chr17:80178498-80202631	1	+	80181438	80202424	789624	15	157,231,138,326,168,120,126,150,117,143,95,64,193,127,452,	0,2920,4154,5414,9878,11254,12275,12824,14004,16692,17059,19600,19900,23245,23681,
#Partially deleted in new
chr17	80178507	80209309	chr17:80178507-80209309	1	+	80181438	80208345	789624	21	148,231,138,326,168,120,126,150,117,143,95,64,193,127,241,64,115,171,122,116,1172,	0,2911,4145,5405,9869,11245,12266,12815,13995,16683,17050,19591,19891,23236,23672,25314,25719,26527,27023,28462,29630,
#Partially deleted in new
chr17	80183991	80192518	chr17:80183991-80192518	0	+	80183991	80187507	8553170	7	247,158,168,120,126,150,16,	0,3510,4385,5761,6782,7331,8511,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	80184150	80188841	chr17:80184150-80188841	0	+	80184150	80184150	8553170	2	88,465,	0,4226,
#Partially deleted in new
chr17	80184174	80204235	chr17:80184174-80204235	0	+	80184174	80202365	789624	13	64,168,120,126,150,117,143,95,64,193,241,64,9,	0,4202,5578,6599,7148,8328,11016,11383,13924,14224,18005,19647,20052,
#Partially deleted in new
chr17	80187799	80198924	chr17:80187799-80198924	0	+	80187799	80187799	8553170	10	124,168,120,126,150,117,143,95,64,526,	0,577,1953,2974,3523,4703,7391,7758,10299,10599,
#Partially deleted in new
chr17	80188222	80196030	chr17:80188222-80196030	0	+	80188222	80188222	8553170	7	322,120,126,150,117,143,473,	0,1530,2551,3100,4280,6968,7335,
#Partially deleted in new
chr17	80192161	80198157	chr17:80192161-80198157	0	+	80192161	80192161	8553170	5	54,117,143,95,59,	0,341,3029,3396,5937,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	80192379	80197532	chr17:80192379-80197532	0	+	80192379	80192379	8553170	3	240,143,1975,	0,2811,3178,
#Partially deleted in new
chr17	80192442	80208951	chr17:80192442-80208951	0	+	80192442	80192442	8553170	12	177,143,95,193,127,241,64,115,171,122,116,814,	0,2748,3115,5956,9301,9737,11379,11784,12592,13088,14527,15695,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	80200672	80205071	chr17:80200672-80205071	3	-	80200672	80200672	8553170	1	4399,	0,
#Partially deleted in new
chr17	80201745	80204335	chr17:80201745-80204335	1	-	80201745	80201745	8553170	4	100,114,188,244,	0,642,2032,2346,
#Partially deleted in new
chr17	80203832	80205949	chr17:80203832-80205949	1	-	80203832	80203832	8553170	2	133,617,	0,1500,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	80206715	80209542	chr17:80206715-80209542	0	-	80206715	80206715	8553170	3	339,89,137,	0,881,2690,
#Deleted in new
chr17	80207604	80209874	chr17:80207604-80209874	0	-	80207604	80207604	8553170	2	81,473,	0,1797,
#Partially deleted in new
chr17	80207655	80214722	chr17:80207655-80214722	0	-	80207655	80214722	789624	5	30,204,82,157,108,	0,4415,6148,6516,6959,
#Partially deleted in new
chr17	80209263	80220400	chr17:80209263-80220400	3	-	80210451	80220313	0	8	1748,204,82,157,151,106,161,175,	0,2807,4540,4908,5351,5769,7768,10962,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	80209281	80220322	chr17:80209281-80220322	0	-	80209281	80209281	8553170	5	5047,151,106,161,97,	0,5333,5751,7750,10944,
#Partially deleted in new
chr17	80209289	80220360	chr17:80209289-80220360	0	-	80212229	80220313	789624	7	1722,204,82,157,151,161,135,	0,2781,4514,4882,5325,7742,10936,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	80210396	80212218	chr17:80210396-80212218	0	-	80211010	80212218	789624	3	615,55,148,	0,1472,1674,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	80211533	80220338	chr17:80211533-80220338	1	-	80212229	80220313	789624	7	741,82,157,151,106,196,113,	0,2270,2638,3081,3499,5498,8692,
#Partially deleted in new
chr17	80212204	80220333	chr17:80212204-80220333	0	-	80214250	80220313	789624	5	70,82,157,161,108,	0,1599,1967,4827,8021,
#Partially deleted in new
chr17	80213820	80220258	chr17:80213820-80220258	0	-	80214659	80220258	789624	6	65,157,65,106,161,33,	0,351,794,1212,3211,6405,
#Partially deleted in new
chr17	80213831	80220331	chr17:80213831-80220331	0	-	80213831	80213831	8553170	5	54,157,106,161,106,	0,340,1201,3200,6394,
#Partially deleted in new
chr17	80214165	80220333	chr17:80214165-80220333	0	-	80214165	80214165	8553170	4	163,106,161,108,	0,867,2866,6060,
#Partially deleted in new
chr17	80214242	80220923	chr17:80214242-80220923	0	-	80214242	80215126	789624	5	86,151,106,161,42,	0,372,790,2789,6639,
#Partially deleted in new
chr17	80214289	80220333	chr17:80214289-80220333	0	-	80214289	80220313	789624	5	39,169,106,161,108,	0,325,743,2742,5936,
#Partially deleted in new
chr17	80214569	80220333	chr17:80214569-80220333	0	-	80214569	80214569	8553170	4	196,106,161,108,	0,463,2462,5656,
#Partially deleted in new
chr17	80214854	80220333	chr17:80214854-80220333	0	-	80214854	80214854	8553170	3	284,161,108,	0,2177,5371,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	80216722	80220333	chr17:80216722-80220333	0	-	80216722	80216722	8553170	2	470,108,	0,3503,
#Partially deleted in new
chr17	80219698	80223283	chr17:80219698-80223283	0	+	80221560	80223283	789624	4	290,247,193,32,	0,1849,2956,3553,
#Partially deleted in new
chr17	80220426	80223272	chr17:80220426-80223272	0	+	80222675	80223272	789624	5	70,200,39,193,21,	0,489,1329,2228,2825,
#Partially deleted in new
chr17	80220429	80253500	chr17:80220429-80253500	3	+	80221560	80252716	789624	18	67,200,247,193,86,80,143,176,73,51,61,56,141,128,100,134,73,876,	0,486,1118,2225,2822,5407,7388,16498,17092,21341,24766,25724,26079,27700,28145,28724,30899,32195,
#Partially deleted in new
chr17	80220437	80253498	chr17:80220437-80253498	1	+	80221560	80252716	789624	18	59,197,247,193,86,80,143,176,73,51,61,56,141,128,100,134,73,874,	0,481,1110,2217,2814,5399,7380,16490,17084,21333,24758,25716,26071,27692,28137,28716,30891,32187,
#Partially deleted in new
chr17	80220437	80253500	chr17:80220437-80253500	1	+	80221560	80252716	789624	17	59,377,193,86,80,143,176,73,51,61,56,141,128,100,134,73,876,	0,980,2217,2814,5399,7380,16490,17084,21333,24758,25716,26071,27692,28137,28716,30891,32187,
#Partially deleted in new
chr17	80220437	80245373	chr17:80220437-80245373	0	+	80220437	80220437	8553170	5	59,176,73,51,178,	0,16490,17084,21333,24758,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	80220437	80222375	chr17:80220437-80222375	0	+	80220437	80220437	8553170	2	59,1460,	0,478,
#Deleted in new
chr17	80220437	80221793	chr17:80220437-80221793	0	+	80221560	80221793	789624	3	59,200,288,	0,478,1068,
#Partially deleted in new
chr17	80220437	80225916	chr17:80220437-80225916	0	+	80221560	80225916	789624	4	59,247,86,80,	0,1110,2814,5399,
#Partially deleted in new
chr17	80220446	80223255	chr17:80220446-80223255	0	+	80220446	80220446	8553170	5	50,200,247,193,76,	0,469,1101,2208,2733,
#Partially deleted in new
chr17	80220468	80237103	chr17:80220468-80237103	0	+	80220468	80220468	8553170	5	28,247,47,80,312,	0,1079,2822,5368,16323,
#Partially deleted in new
chr17	80220468	80252716	chr17:80220468-80252716	1	+	80221560	80252716	789624	17	28,247,193,86,80,143,176,73,51,61,56,141,128,100,134,73,92,	0,1079,2186,2783,5368,7349,16459,17053,21302,24727,25685,26040,27661,28106,28685,30860,32156,
#Partially deleted in new
chr17	80221299	80223307	chr17:80221299-80223307	0	+	80221299	80221299	8553170	2	495,128,	0,1880,
#Partially deleted in new
chr17	80221345	80227854	chr17:80221345-80227854	0	+	80221560	80227854	789624	5	449,193,86,80,37,	0,1309,1906,4491,6472,
#Partially deleted in new
chr17	80225581	80237010	chr17:80225581-80237010	0	+	80225581	80225581	8553170	3	335,143,83,	0,2236,11346,
#Partially deleted in new
chr17	80227851	80245245	chr17:80227851-80245245	0	+	80227851	80245245	789624	6	109,176,132,73,51,50,	0,9076,9456,9670,13919,17344,
#Partially deleted in new
chr17	80248213	80252899	chr17:80248213-80252899	0	+	80248213	80251360	789624	4	44,100,73,275,	0,361,3115,4411,
#Partially deleted in new
chr17	80260865	80395312	chr17:80260865-80395312	1	+	80263681	80393498	789624	69	37,205,164,147,549,123,179,159,200,284,257,198,217,74,154,156,90,123,169,174,150,626,166,218,141,165,1156,194,159,3609,137,96,119,120,155,148,136,192,146,155,213,182,121,101,183,170,100,112,214,191,132,111,243,82,35,95,157,181,92,252,133,84,181,202,78,195,90,185,1968,	0,2708,12375,17898,26949,27767,28793,29704,30762,33854,34691,37455,45386,46262,48152,52146,56322,58324,64164,66950,67462,71140,73239,75295,76720,76967,78335,82266,82991,83812,88904,89435,90819,92074,92646,93153,93575,97422,99195,100868,102236,102743,103567,106882,107095,108636,108902,111008,111655,112109,113592,114894,115435,116016,116896,118754,119965,120681,122113,122811,124173,124672,125384,125824,127746,128307,128962,129146,132479,
#Boundary problem: need 68, got 0, diff 68, mapped 0.0
chr17	80260867	80398786	chr17:80260867-80398786	3	+	80263681	80393498	789624	68	35,205,164,549,123,179,159,200,284,257,198,217,74,154,156,90,123,169,174,150,626,166,218,141,165,1156,194,159,3609,137,96,119,120,155,148,136,192,146,155,213,182,121,101,183,170,100,112,214,191,132,111,243,82,35,95,157,181,92,252,133,84,181,202,78,195,90,185,5442,	0,2706,12373,26947,27765,28791,29702,30760,33852,34689,37453,45384,46260,48150,52144,56320,58322,64162,66948,67460,71138,73237,75293,76718,76965,78333,82264,82989,83810,88902,89433,90817,92072,92644,93151,93573,97420,99193,100866,102234,102741,103565,106880,107093,108634,108900,111006,111653,112107,113590,114892,115433,116014,116894,118752,119963,120679,122111,122809,124171,124670,125382,125822,127744,128305,128960,129144,132477,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr17	80260869	80321463	chr17:80260869-80321463	1	+	80263681	80319480	789624	17	33,205,164,549,123,179,159,200,284,257,198,217,74,154,156,90,2274,	0,2704,12371,26945,27763,28789,29700,30758,33850,34687,37451,45382,46258,48148,52142,56318,58320,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr17	80287958	80336900	chr17:80287958-80336900	0	+	80287958	80287958	8553170	20	405,123,179,159,200,284,257,198,217,74,154,156,90,123,169,174,150,626,166,740,	0,674,1700,2611,3669,6761,7598,10362,18293,19169,21059,25053,29229,31231,37071,39857,40369,44047,46146,48202,
#Partially deleted in new
chr17	80289760	80292007	chr17:80289760-80292007	0	+	80289760	80289760	8553170	3	77,159,380,	0,809,1867,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	80295728	80298775	chr17:80295728-80298775	0	+	80295728	80295728	8553170	2	85,455,	0,2592,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	80315650	80316633	chr17:80315650-80316633	3	+	80315650	80315650	8553170	2	73,580,	0,403,
#Deleted in new
chr17	80333840	80334366	chr17:80333840-80334366	3	-	80333840	80333840	8553170	1	526,	0,
#Partially deleted in new
chr17	80337513	80339446	chr17:80337513-80339446	0	+	80337513	80337513	8553170	3	213,165,246,	0,319,1687,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	80339897	80342058	chr17:80339897-80342058	3	+	80339897	80339897	8553170	1	2161,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	80351827	80415118	chr17:80351827-80415118	3	-	80351827	80351827	789624	2	3461,190,	0,63101,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	80351836	80353811	chr17:80351836-80353811	0	-	80351836	80351836	8553170	1	1975,	0,
#Partially deleted in new
chr17	80354111	80382188	chr17:80354111-80382188	0	+	80354111	80354111	8553170	23	55,136,192,146,155,213,182,121,101,183,170,100,112,214,191,132,111,243,82,35,95,157,642,	0,329,4176,5949,7622,8990,9497,10321,13636,13849,15390,15656,17762,18409,18863,20346,21648,22189,22770,23650,25508,26719,27435,
#Partially deleted in new
chr17	80354436	80415118	chr17:80354436-80415118	0	-	80354436	80354436	8553170	2	379,190,	0,60492,
#Partially deleted in new
chr17	80354458	80360389	chr17:80354458-80360389	0	+	80354458	80354458	8553170	3	118,192,329,	0,3829,5602,
#Deleted in new
chr17	80363352	80364520	chr17:80363352-80364520	0	+	80363352	80363352	8553170	2	438,88,	0,1080,
#Deleted in new
chr17	80363670	80365369	chr17:80363670-80365369	0	+	80363670	80363670	8553170	3	120,121,524,	0,762,1175,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr17	80371650	80395253	chr17:80371650-80395253	0	+	80371650	80371650	8553170	21	335,214,191,132,111,243,82,35,95,157,1524,252,133,84,181,202,78,195,90,185,1909,	0,870,1324,2807,4109,4650,5231,6111,7969,9180,9896,12026,13388,13887,14599,15039,16961,17522,18177,18361,21694,
#Partially deleted in new
chr17	80373068	80375059	chr17:80373068-80375059	0	+	80373068	80374679	789624	2	97,602,	0,1389,
#Deleted in new
chr17	80375815	80377177	chr17:80375815-80377177	0	+	80375815	80375815	8553170	3	55,243,296,	0,485,1066,
#Partially deleted in new
chr17	80377677	80379798	chr17:80377677-80379798	0	+	80377677	80377677	8553170	2	119,179,	0,1942,
#Deleted in new
chr17	80379455	80380891	chr17:80379455-80380891	0	+	80379455	80379455	8553170	2	259,61,	0,1375,
#Partially deleted in new
chr17	80381003	80415168	chr17:80381003-80415168	0	-	80381003	80381003	8553170	2	282,240,	0,33925,
#Partially deleted in new
chr17	80382362	80395312	chr17:80382362-80395312	0	+	80382362	80382362	8553170	12	92,92,252,133,84,181,202,78,195,90,185,1968,	0,616,1314,2676,3175,3887,4327,6249,6810,7465,7649,10982,
#Partially deleted in new
chr17	80384872	80386410	chr17:80384872-80386410	0	+	80384872	80384872	8553170	3	299,84,161,	0,665,1377,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	80386385	80396278	chr17:80386385-80396278	0	+	80386385	80386385	8553170	6	45,202,756,90,185,2934,	0,304,2226,3442,3626,6959,
#Partially deleted in new
chr17	80388529	80389888	chr17:80388529-80389888	0	+	80388529	80388529	8553170	2	838,61,	0,1298,
#Partially deleted in new
chr17	80415164	80429818	chr17:80415164-80429818	0	+	80415194	80428600	789624	6	86,113,69,129,65,46,	0,8355,9867,10327,13431,14608,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	80415164	80416253	chr17:80415164-80416253	0	+	80415164	80415164	8553170	2	86,604,	0,485,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	80415166	80438081	chr17:80415166-80438081	3	+	80415194	80436143	0	10	84,172,135,40,113,69,129,65,59,1949,	0,483,6661,7039,8353,9865,10325,13429,14606,20966,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	80415166	80438081	chr17:80415166-80438081	1	+	80415194	80436143	0	9	84,172,40,113,69,129,65,59,1949,	0,483,7039,8353,9865,10325,13429,14606,20966,
#Partially deleted in new
chr17	80415166	80429842	chr17:80415166-80429842	0	+	80415194	80425498	789624	7	84,172,113,69,129,65,70,	0,483,8353,9865,10325,13429,14606,
#Partially deleted in new
chr17	80415177	80425575	chr17:80415177-80425575	0	+	80415194	80422205	789624	6	73,172,106,113,69,84,	0,472,6962,8342,9854,10314,
#Partially deleted in new
chr17	80415177	80420533	chr17:80415177-80420533	1	+	80415194	80419675	789624	4	73,172,135,484,	0,472,4408,4872,
#Partially deleted in new
chr17	80415183	80430343	chr17:80415183-80430343	1	+	80415194	80429923	0	8	67,172,40,113,69,129,65,571,	0,466,7022,8336,9848,10308,13412,14589,
#Partially deleted in new
chr17	80415185	80428481	chr17:80415185-80428481	0	+	80415185	80415185	8553170	6	65,172,40,113,129,37,	0,464,7020,8334,10306,13259,
#Partially deleted in new
chr17	80415314	80430324	chr17:80415314-80430324	1	+	80425097	80429923	789624	7	507,40,113,69,129,65,552,	0,6891,8205,9717,10177,13281,14458,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	80415451	80438086	chr17:80415451-80438086	1	+	80425097	80436143	0	7	159,113,69,129,65,59,1954,	0,8068,9580,10040,13144,14321,20681,
#Partially deleted in new
chr17	80415451	80425498	chr17:80415451-80425498	0	+	80425097	80425498	8553170	6	67,172,40,113,69,7,	0,198,6754,8068,9580,10040,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	80415451	80438082	chr17:80415451-80438082	1	+	80425097	80436198	0	6	67,172,113,69,129,1950,	0,198,8068,9580,10040,20681,
#Partially deleted in new
chr17	80415452	80425620	chr17:80415452-80425620	0	+	80421848	80425620	789624	6	369,135,40,113,69,129,	0,6375,6753,8067,9579,10039,
#Partially deleted in new
chr17	80415452	80422242	chr17:80415452-80422242	0	+	80421848	80422242	789624	5	66,172,135,135,37,	0,197,4133,6375,6753,
#Partially deleted in new
chr17	80415452	80425513	chr17:80415452-80425513	0	+	80425097	80425513	789624	6	66,172,165,113,69,22,	0,197,2328,8067,9579,10039,
#Partially deleted in new
chr17	80415454	80423816	chr17:80415454-80423816	0	+	80415454	80415454	8553170	3	64,172,297,	0,195,8065,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	80415457	80438086	chr17:80415457-80438086	1	+	80425097	80436198	0	5	153,113,69,129,1954,	0,8062,9574,10034,20675,
#Partially deleted in new
chr17	80415457	80425057	chr17:80415457-80425057	0	+	80421848	80425057	789624	6	61,172,135,40,113,26,	0,192,6370,6748,8062,9574,
#Partially deleted in new
chr17	80415468	80424348	chr17:80415468-80424348	1	+	80421848	80424284	789624	6	50,172,135,40,113,115,	0,181,6359,6737,8051,8765,
#Partially deleted in new
chr17	80415468	80423611	chr17:80415468-80423611	0	+	80415468	80415468	8553170	3	353,135,92,	0,2342,8051,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	80415468	80418837	chr17:80415468-80418837	0	+	80415468	80415468	8553170	2	353,1494,	0,1875,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	80415486	80438082	chr17:80415486-80438082	1	+	80425097	80436143	0	8	124,40,113,69,129,65,59,1950,	0,6719,8033,9545,10005,13109,14286,20646,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	80415652	80417145	chr17:80415652-80417145	0	+	80415652	80415652	8553170	2	169,206,	0,1287,
#Partially deleted in new
chr17	80415668	80430152	chr17:80415668-80430152	1	+	80421848	80430129	789624	9	153,135,40,113,69,162,65,59,112,	0,6159,6537,7851,9363,9790,12927,14104,14372,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	80417416	80418606	chr17:80417416-80418606	0	+	80417416	80417416	8553170	2	529,165,	0,1025,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	80417620	80423587	chr17:80417620-80423587	0	+	80417620	80417620	8553170	3	325,40,68,	0,4585,5899,
#Deleted in new
chr17	80419417	80419493	chr17:80419417-80419493	3	+	80419417	80419417	5263520	1	76,	0,
#Partially deleted in new
chr17	80423519	80430341	chr17:80423519-80430341	0	+	80423519	80430129	789624	5	113,69,65,59,301,	0,1512,5076,6253,6521,
#Deleted in new
chr17	80423564	80424284	chr17:80423564-80424284	0	+	80423564	80424279	789624	2	68,266,	0,454,
#Partially deleted in new
chr17	80425503	80430343	chr17:80425503-80430343	0	+	80425503	80430129	789624	5	117,183,65,59,303,	0,2164,3092,4269,4537,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	80453734	80454729	chr17:80453734-80454729	3	-	80453734	80453734	8553170	1	995,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	80463450	80465593	chr17:80463450-80465593	3	-	80463450	80463450	8553170	1	2143,	0,
#Deleted in new
chr17	80467147	80476604	chr17:80467147-80476604	3	-	80470812	80476446	789624	5	3887,180,245,208,602,	0,4584,6052,8363,8855,
#Deleted in new
chr17	80467147	80474698	chr17:80467147-80474698	0	-	80467147	80467147	8553170	4	1770,508,180,1499,	0,3379,4584,6052,
#Deleted in new
chr17	80471902	80475812	chr17:80471902-80475812	0	-	80471902	80471902	8553170	3	9,245,302,	0,1297,3608,
#Deleted in new
chr17	80473413	80477843	chr17:80473413-80477843	0	-	80473413	80473413	8553170	3	31,208,233,	0,2097,4197,
#Deleted in new
chr17	80515214	80515389	chr17:80515214-80515389	7	+	80515214	80515214	16724991	1	175,	0,
#Deleted in new
chr17	80515656	80515812	chr17:80515656-80515812	7	+	80515656	80515656	16724991	1	156,	0,
#Deleted in new
chr17	80542202	80542605	chr17:80542202-80542605	7	+	80542202	80542202	16724991	1	403,	0,
#Partially deleted in new
chr17	80544818	80858124	chr17:80544818-80858124	0	+	80545629	80707863	789624	12	973,103,159,147,176,60,101,145,76,102,84,335,	0,80872,163022,185741,209191,246631,277382,278260,293103,301654,310645,312971,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr17	80544830	80909867	chr17:80544830-80909867	0	+	80544830	80544830	8553170	22	961,103,83,159,147,176,60,101,145,76,102,84,111,75,66,192,141,118,141,159,119,314,	0,80860,98897,163010,185729,209179,246619,277370,278248,293091,301642,310633,312959,335584,338588,338950,340177,346889,347898,348876,363980,364723,
#Partially deleted in new
chr17	80544873	80755098	chr17:80544873-80755098	0	+	80544873	80544873	8553170	6	918,103,83,159,147,1089,	0,80817,98854,162967,185686,209136,
#Partially deleted in new
chr17	80544876	80823620	chr17:80544876-80823620	1	+	80545629	80823227	0	9	915,103,83,159,147,176,60,101,542,	0,80814,98851,162964,185683,209133,246573,277324,278202,
#Partially deleted in new
chr17	80545267	80966368	chr17:80545267-80966368	3	+	80545629	80964330	0	34	524,103,83,159,147,176,60,101,145,76,102,84,111,75,66,192,141,118,141,159,119,104,184,111,106,115,125,105,107,128,87,117,130,2107,	0,80423,98460,162573,185292,208742,246182,276933,277811,292654,301205,310196,312522,335147,338151,338513,339740,346452,347461,348439,363543,377456,378222,380102,395228,400399,401959,404175,412356,414810,416126,417193,417660,418994,
#Partially deleted in new
chr17	80545467	80966368	chr17:80545467-80966368	1	+	80545629	80964330	0	30	324,103,83,159,147,176,60,101,145,76,102,84,111,118,141,159,119,104,184,111,106,115,125,105,107,128,87,117,130,2107,	0,80223,98260,162373,185092,208542,245982,276733,277611,292454,301005,309996,312322,346252,347261,348239,363343,377256,378022,379902,395028,400199,401759,403975,412156,414610,415926,416993,417460,418794,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	80545665	80593805	chr17:80545665-80593805	0	+	80545665	80545665	8553170	2	126,562,	0,47578,
#Deleted in new
chr17	80602548	80602926	chr17:80602548-80602926	7	-	80602548	80602548	16724991	1	378,	0,
#Partially deleted in new
chr17	80708932	80754104	chr17:80708932-80754104	0	+	80708932	80708932	8553170	3	182,147,95,	0,21627,45077,
#Partially deleted in new
chr17	80743286	80966371	chr17:80743286-80966371	0	+	80743286	80743286	8553170	30	141,176,60,101,145,76,102,84,111,75,66,192,141,118,141,159,119,104,184,111,106,115,125,105,107,128,87,117,130,2110,	0,10723,48163,78914,79792,94635,103186,112177,114503,137128,140132,140494,141721,148433,149442,150420,165524,179437,180203,182083,197209,202380,203940,206156,214337,216791,218107,219174,219641,220975,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	80801639	80805632	chr17:80801639-80805632	3	-	80801639	80801639	789624	4	2100,228,210,666,	0,2641,3025,3327,
#Deleted in new
chr17	80922723	80924172	chr17:80922723-80924172	0	+	80922723	80924093	789624	2	104,683,	0,766,
#Deleted in new
chr17	80940417	80942033	chr17:80940417-80942033	3	-	80940417	80940417	8553170	3	135,162,197,	0,800,1419,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	80945566	80949545	chr17:80945566-80949545	0	+	80945566	80945566	8553170	3	215,125,103,	0,1660,3876,
#Partially deleted in new
chr17	80948549	80961444	chr17:80948549-80961444	0	+	80948549	80948549	8553170	5	110,105,107,128,51,	0,893,9074,11528,12844,
#Deleted in new
chr17	80960765	80961713	chr17:80960765-80961713	3	-	80960765	80960765	8553170	2	245,304,	0,644,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	80966238	80971213	chr17:80966238-80971213	3	-	80966238	80966238	789624	2	2707,426,	0,4549,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	80968219	80971078	chr17:80968219-80971078	1	-	80968219	80968219	8553170	2	726,1365,	0,1494,
#Partially deleted in new
chr17	80976453	80976948	chr17:80976453-80976948	7	+	80976453	80976453	16724991	1	495,	0,
#Partially deleted in new
chr17	80991597	80999145	chr17:80991597-80999145	0	+	80995103	80999145	789624	8	76,110,88,87,66,81,55,48,	0,2983,3421,4074,5409,5663,6768,7500,
#Partially deleted in new
chr17	80991840	81000133	chr17:80991840-81000133	3	+	80991918	80999153	0	8	141,110,88,87,66,81,55,1036,	0,2740,3178,3831,5166,5420,6525,7257,
#Partially deleted in new
chr17	80994580	80998670	chr17:80994580-80998670	0	+	80994580	80998608	789624	6	110,88,87,66,81,305,	0,438,1091,2426,2680,3785,
#Partially deleted in new
chr17	80994643	81009517	chr17:80994643-81009517	0	+	80994643	81009487	789624	7	47,88,87,66,81,55,128,	0,375,1028,2363,2617,3722,14746,
#Partially deleted in new
chr17	80999508	81000130	chr17:80999508-81000130	3	-	80999508	80999508	8553170	2	34,304,	0,318,
#Partially deleted in new
chr17	80999517	81000127	chr17:80999517-81000127	0	-	80999517	80999517	8553170	2	142,143,	0,467,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	81003334	81005132	chr17:81003334-81005132	3	+	81003334	81003334	8553170	1	1798,	0,
#Partially deleted in new
chr17	81017968	81020011	chr17:81017968-81020011	3	-	81017968	81017968	8553170	3	380,144,345,	0,477,1698,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	81017968	81018492	chr17:81017968-81018492	0	-	81017968	81017968	8553170	2	238,113,	0,411,
#Partially deleted in new
chr17	81023544	81025503	chr17:81023544-81025503	3	-	81023544	81023544	8553170	2	128,240,	0,1719,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	81029129	81034573	chr17:81029129-81034573	3	-	81029129	81029129	8553170	2	4269,196,	0,5248,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	81029701	81034881	chr17:81029701-81034881	0	-	81029701	81029701	789624	2	3697,317,	0,4863,
#Partially deleted in new
chr17	81035121	81109238	chr17:81035121-81109238	3	+	81035254	81108998	0	14	187,76,87,62,72,138,153,222,202,202,69,163,35,271,	0,18546,22759,49710,50532,51321,64806,68380,68785,69392,70956,71623,73353,73846,
#Partially deleted in new
chr17	81035147	81085100	chr17:81035147-81085100	0	+	81035147	81035147	8553170	4	161,76,87,269,	0,18520,22733,49684,
#Partially deleted in new
chr17	81035149	81086499	chr17:81035149-81086499	0	+	81035254	81085624	789624	6	159,76,87,62,143,57,	0,18518,22731,49682,50433,51293,
#Partially deleted in new
chr17	81035150	81116225	chr17:81035150-81116225	1	+	81035254	81115839	0	14	158,76,87,62,72,138,153,222,202,202,69,163,35,456,	0,18517,22730,49681,50503,51292,64777,68351,68756,69363,70927,71594,73324,80619,
#Partially deleted in new
chr17	81035150	81076502	chr17:81035150-81076502	0	+	81035150	81035150	8553170	4	158,76,87,238,	0,18517,22730,41114,
#Partially deleted in new
chr17	81035150	81109372	chr17:81035150-81109372	0	+	81035254	81086452	789624	15	158,99,76,87,62,62,138,153,222,202,202,69,163,35,405,	0,1712,18517,22730,49681,50503,51292,64777,68351,68756,69363,70927,71594,73324,73817,
#Partially deleted in new
chr17	81035150	81086504	chr17:81035150-81086504	0	+	81057924	81086504	789624	6	158,124,87,62,72,62,	0,18517,22730,49681,50503,51292,
#Partially deleted in new
chr17	81035155	81109387	chr17:81035155-81109387	1	+	81035254	81108513	0	13	153,76,87,62,72,138,153,222,202,202,69,163,913,	0,18512,22725,49676,50498,51287,64772,68346,68751,69358,70922,71589,73319,
#Partially deleted in new
chr17	81035157	81116225	chr17:81035157-81116225	1	+	81035254	81110941	789624	16	151,99,76,87,62,72,138,153,222,202,202,69,163,35,42,456,	0,1705,18510,22723,49674,50496,51285,64770,68344,68749,69356,70920,71587,73317,75756,80612,
#Partially deleted in new
chr17	81035161	81117432	chr17:81035161-81117432	1	+	81035254	81116305	0	15	147,76,87,62,72,138,153,222,202,202,69,163,35,48,1203,	0,18506,22719,49670,50492,51281,64766,68340,68745,69352,70916,71583,73313,80608,81068,
#Partially deleted in new
chr17	81035161	81116224	chr17:81035161-81116224	1	+	81035254	81110941	0	15	147,76,87,62,72,138,153,222,202,202,69,163,35,46,455,	0,18506,22719,49670,50492,51281,64766,68340,68745,69352,70916,71583,73313,75752,80608,
#Partially deleted in new
chr17	81035175	81087022	chr17:81035175-81087022	0	+	81035175	81035175	8553170	7	133,76,87,62,72,138,89,	0,18492,22705,49656,50478,51267,51758,
#Partially deleted in new
chr17	81036002	81086572	chr17:81036002-81086572	0	+	81053673	81086572	789624	7	55,99,76,87,62,72,130,	0,860,17665,21878,48829,49651,50440,
#Partially deleted in new
chr17	81053361	81100025	chr17:81053361-81100025	0	+	81053673	81100025	789624	7	93,76,87,62,72,138,98,	0,306,4519,31470,32292,33081,46566,
#Partially deleted in new
chr17	81053361	81099977	chr17:81053361-81099977	0	+	81053361	81053361	8553170	7	93,72,87,62,72,138,50,	0,306,4519,31470,32292,33081,46566,
#Partially deleted in new
chr17	81056361	81100019	chr17:81056361-81100019	0	+	81057924	81100019	789624	6	116,87,62,72,138,92,	0,1519,28470,29292,30081,43566,
#Partially deleted in new
chr17	81057335	81099955	chr17:81057335-81099955	0	+	81057924	81099955	789624	6	191,87,62,72,138,28,	0,545,27496,28318,29107,42592,
#Partially deleted in new
chr17	81057614	81103920	chr17:81057614-81103920	0	+	81057924	81103920	789624	8	34,87,62,72,138,153,222,14,	0,266,27217,28039,28828,42313,45887,46292,
#Partially deleted in new
chr17	81057733	81103574	chr17:81057733-81103574	0	+	81057924	81103574	789624	7	61,87,62,72,138,153,73,	0,147,27098,27920,28709,42194,45768,
#Partially deleted in new
chr17	81057743	81103579	chr17:81057743-81103579	0	+	81057924	81086452	789624	7	51,87,62,62,138,153,78,	0,137,27088,27910,28699,42184,45758,
#Partially deleted in new
chr17	81063739	81100080	chr17:81063739-81100080	0	+	81063739	81063739	8553170	5	117,62,72,138,153,	0,21092,21914,22703,36188,
#Deleted in new
chr17	81082988	81086464	chr17:81082988-81086464	0	+	81082988	81082988	8553170	4	419,62,72,22,	0,1843,2665,3454,
#Partially deleted in new
chr17	81083566	81103747	chr17:81083566-81103747	0	+	81083566	81083566	8553170	6	343,62,72,138,153,246,	0,1265,2087,2876,16361,19935,
#Partially deleted in new
chr17	81085094	81116224	chr17:81085094-81116224	0	+	81085094	81085094	8553170	11	631,138,153,222,202,202,69,163,35,46,455,	0,1348,14833,18407,18812,19419,20983,21650,23380,25819,30675,
#Partially deleted in new
chr17	81086460	81110512	chr17:81086460-81110512	0	+	81086460	81110297	789624	3	120,153,236,	0,13467,23816,
#Partially deleted in new
chr17	81087491	81103596	chr17:81087491-81103596	0	+	81087491	81087491	8553170	3	356,153,95,	0,12436,16010,
#Partially deleted in new
chr17	81097578	81104566	chr17:81097578-81104566	0	+	81103588	81104566	789624	5	118,153,222,202,53,	0,2349,5923,6328,6935,
#Partially deleted in new
chr17	81098117	81108827	chr17:81098117-81108827	1	+	81098117	81108513	789624	8	78,153,222,202,202,69,163,353,	0,1810,5384,5789,6396,7960,8627,10357,
#Partially deleted in new
chr17	81104001	81116048	chr17:81104001-81116048	0	+	81104001	81115839	789624	6	107,205,69,163,35,279,	0,509,2076,2743,4473,11768,
#Deleted in new
chr17	81105085	81109372	chr17:81105085-81109372	0	+	81105085	81105085	8553170	2	1061,2628,	0,1659,
#Partially deleted in new
chr17	81117294	81166017	chr17:81117294-81166017	3	-	81118401	81165992	789624	14	1148,201,148,2623,150,122,85,134,88,119,80,145,134,80,	0,2085,2641,2906,5899,7432,7635,9132,10288,10497,11175,13766,17073,48643,
#Partially deleted in new
chr17	81117297	81166072	chr17:81117297-81166072	0	-	81120924	81165992	789624	16	1145,201,148,784,1179,289,150,122,85,134,88,119,80,145,134,135,	0,2082,2638,2903,3950,5237,5896,7429,7632,9129,10285,10494,11172,13763,17070,48640,
#Deleted in new
chr17	81117297	81121505	chr17:81117297-81121505	0	-	81120924	81121505	789624	6	1145,201,148,199,157,258,	0,2082,2638,2903,3530,3950,
#Deleted in new
chr17	81117303	81131948	chr17:81117303-81131948	1	-	81118401	81131085	789624	13	1139,201,148,2623,150,122,85,134,88,119,80,145,47,	0,2076,2632,2897,5890,7423,7626,9123,10279,10488,11166,13757,14598,
#Deleted in new
chr17	81117999	81128900	chr17:81117999-81128900	0	-	81117999	81117999	8553170	2	323,431,	0,10470,
#Deleted in new
chr17	81122508	81125014	chr17:81122508-81125014	0	-	81122508	81122508	8553170	4	224,150,122,85,	0,685,2218,2421,
#Deleted in new
chr17	81122618	81128598	chr17:81122618-81128598	0	-	81122618	81127823	8553170	8	205,150,122,85,134,88,119,129,	0,575,2108,2311,3808,4964,5173,5851,
#Deleted in new
chr17	81124961	81128888	chr17:81124961-81128888	0	-	81124961	81127823	8553170	6	53,134,88,119,80,205,	0,1465,2621,2830,3508,3722,
#Deleted in new
chr17	81125275	81125373	chr17:81125275-81125373	3	-	81125275	81125275	5263520	1	98,	0,
#Deleted in new
chr17	81125876	81125955	chr17:81125876-81125955	3	+	81125876	81125876	5263520	1	79,	0,
#Deleted in new
chr17	81125882	81125949	chr17:81125882-81125949	3	-	81125882	81125882	5263520	1	67,	0,
#Deleted in new
chr17	81126445	81128925	chr17:81126445-81128925	0	-	81126784	81127823	8553170	5	115,160,88,119,456,	0,212,1137,1346,2024,
#Deleted in new
chr17	81127852	81132847	chr17:81127852-81132847	0	-	81127852	81132721	789624	4	58,80,145,192,	0,617,3208,4803,
#Deleted in new
chr17	81133195	81133308	chr17:81133195-81133308	3	-	81133195	81133195	5263520	1	113,	0,
#Partially deleted in new
chr17	81134367	81166077	chr17:81134367-81166077	0	-	81134367	81134367	8553170	3	134,133,140,	0,31314,31570,
#Deleted in new
chr17	81135770	81136256	chr17:81135770-81136256	3	+	81135770	81135770	8553170	2	151,211,	0,275,
#Partially deleted in new
chr17	81165506	81183164	chr17:81165506-81183164	0	+	81165506	81165506	5263520	6	241,168,235,210,523,200,	0,1170,13411,15616,16052,17458,
#Partially deleted in new
chr17	81165506	81183164	chr17:81165506-81183164	3	+	81181226	81183011	789624	7	241,168,235,210,136,116,200,	0,1170,13411,15616,16052,16459,17458,
#Partially deleted in new
chr17	81165515	81181978	chr17:81165515-81181978	0	+	81165515	81165515	8553170	4	232,168,235,853,	0,1161,13402,15610,
#Partially deleted in new
chr17	81189592	81222945	chr17:81189592-81222945	3	-	81189768	81220056	789624	25	251,61,164,178,143,75,118,202,103,117,126,126,177,183,95,169,117,118,159,114,128,115,95,194,177,	0,322,1046,1314,1600,2725,2883,4333,5277,6242,7108,7337,8119,8522,9284,9788,10126,10736,12647,13901,17151,17532,19335,30287,33176,
#Partially deleted in new
chr17	81189595	81222999	chr17:81189595-81222999	1	-	81189768	81220056	789624	26	248,61,164,178,143,75,118,108,202,103,117,126,126,177,192,95,169,117,118,159,114,128,115,95,194,231,	0,319,1043,1311,1597,2722,2880,3140,4330,5274,6239,7105,7334,8116,8510,9281,9785,10123,10733,12644,13898,17148,17529,19332,30284,33173,
#Deleted in new
chr17	81189596	81194028	chr17:81189596-81194028	0	-	81189833	81194028	789624	7	379,164,178,143,75,118,103,	0,1042,1310,1596,2721,2879,4329,
#Deleted in new
chr17	81189596	81197019	chr17:81189596-81197019	0	-	81189768	81197019	789624	13	247,61,164,178,158,75,118,108,202,103,117,126,90,	0,318,1042,1310,1596,2721,2879,3139,4329,5273,6238,7104,7333,
#Partially deleted in new
chr17	81189647	81222930	chr17:81189647-81222930	1	-	81189768	81220056	789624	26	196,61,164,178,143,75,118,108,202,103,117,126,126,177,183,95,169,117,118,159,114,128,115,95,194,162,	0,267,991,1259,1545,2670,2828,3088,4278,5222,6187,7053,7282,8064,8467,9229,9733,10071,10681,12592,13846,17096,17477,19280,30232,33121,
#Partially deleted in new
chr17	81189647	81222930	chr17:81189647-81222930	1	-	81189768	81220056	789624	25	196,61,164,178,143,75,118,202,103,117,126,126,177,192,95,169,117,118,159,114,128,115,95,194,162,	0,267,991,1259,1545,2670,2828,4278,5222,6187,7053,7282,8064,8458,9229,9733,10071,10681,12592,13846,17096,17477,19280,30232,33121,
#Deleted in new
chr17	81189826	81192376	chr17:81189826-81192376	0	-	81189826	81192376	789624	6	17,61,164,178,140,59,	0,88,812,1080,1366,2491,
#Deleted in new
chr17	81197392	81200288	chr17:81197392-81200288	3	+	81197392	81197392	8553170	2	63,742,	0,2154,
#Partially deleted in new
chr17	81199817	81204071	chr17:81199817-81204071	0	-	81199817	81199817	8553170	5	18,118,159,114,204,	0,511,2422,3676,4050,
#Partially deleted in new
chr17	81228276	81239091	chr17:81228276-81239091	3	-	81228927	81239033	0	12	1200,135,79,114,175,72,79,68,94,92,73,106,	0,2267,3121,3301,3570,5155,5361,5704,8431,8703,9110,10709,
#Partially deleted in new
chr17	81228276	81239041	chr17:81228276-81239041	0	-	81228276	81228276	8553170	11	1200,135,79,114,175,72,79,68,94,480,56,	0,2267,3121,3301,3570,5155,5361,5704,8431,8703,10709,
#Partially deleted in new
chr17	81228278	81238403	chr17:81228278-81238403	0	-	81228278	81228278	8553170	11	1198,135,79,114,175,204,72,79,68,94,1424,	0,2265,3119,3299,3568,4036,5153,5359,5702,8429,8701,
#Deleted in new
chr17	81228706	81233983	chr17:81228706-81233983	3	+	81228706	81228706	8553170	4	671,190,3600,45,	0,1031,1295,5232,
#Partially deleted in new
chr17	81228927	81239033	chr17:81228927-81239033	1	-	81228927	81239033	789624	13	549,135,79,114,175,204,72,79,68,94,92,73,48,	0,1616,2470,2650,2919,3387,4504,4710,5053,7780,8052,8459,10058,
#Deleted in new
chr17	81229256	81231677	chr17:81229256-81231677	0	-	81231435	81231677	789624	4	220,135,96,100,	0,1287,2141,2321,
#Deleted in new
chr17	81229340	81232206	chr17:81229340-81232206	0	+	81229340	81229340	789624	4	37,190,239,349,	0,397,661,2517,
#Deleted in new
chr17	81231861	81234234	chr17:81231861-81234234	0	-	81231861	81231861	8553170	5	160,204,72,79,254,	0,453,1570,1776,2119,
#Partially deleted in new
chr17	81233993	81237598	chr17:81233993-81237598	0	-	81233993	81237486	789624	4	55,94,92,212,	0,2714,2986,3393,
#Partially deleted in new
chr17	81234002	81239057	chr17:81234002-81239057	0	-	81237427	81239033	789624	5	46,94,92,73,544,	0,2705,2977,3384,4511,
#Deleted in new
chr17	81236658	81237528	chr17:81236658-81237528	0	-	81236658	81236658	8553170	2	413,142,	0,728,
#Deleted in new
chr17	81237386	81239010	chr17:81237386-81239010	0	-	81238606	81239010	789624	4	73,110,360,25,	0,164,1127,1599,
#Deleted in new
chr17	81237623	81239040	chr17:81237623-81239040	0	-	81237623	81237623	8553170	2	37,527,	0,890,
#Deleted in new
chr17	81238132	81239042	chr17:81238132-81239042	0	-	81238132	81238132	8553170	2	27,529,	0,381,
#Deleted in new
chr17	81238211	81239033	chr17:81238211-81239033	0	-	81238211	81238211	8553170	2	662,48,	0,774,
#Partially deleted in new
chr17	81239238	81241281	chr17:81239238-81241281	3	+	81239363	81241016	789624	3	209,111,295,	0,329,1748,
#Partially deleted in new
chr17	81239304	81241081	chr17:81239304-81241081	0	+	81239304	81239304	8553170	3	99,84,95,	0,290,1682,
#Partially deleted in new
chr17	81239310	81241214	chr17:81239310-81241214	0	+	81239310	81239310	8553170	3	137,376,228,	0,257,1676,
#Partially deleted in new
chr17	81239610	81241279	chr17:81239610-81241279	0	+	81239610	81241153	789624	2	72,293,	0,1376,
#Deleted in new
chr17	81239628	81239898	chr17:81239628-81239898	0	+	81239628	81239628	8553170	2	50,127,	0,143,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	81239913	81241169	chr17:81239913-81241169	0	+	81239913	81239913	8553170	2	526,183,	0,1073,
#Partially deleted in new
chr17	81244999	81295305	chr17:81244999-81295305	1	-	81245555	81294921	789624	16	1674,177,120,489,168,157,107,112,183,103,125,144,94,46,118,483,	0,1885,6493,7195,8073,15238,25918,27516,30969,32031,35609,37189,38409,39850,44691,49823,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	81245003	81247635	chr17:81245003-81247635	0	-	81245003	81245003	8553170	2	1237,751,	0,1881,
#Partially deleted in new
chr17	81246177	81252273	chr17:81246177-81252273	0	-	81246177	81252273	789624	5	496,177,24,120,79,	0,707,3892,5315,6017,
#Partially deleted in new
chr17	81246271	81252272	chr17:81246271-81252272	0	-	81246271	81252272	789624	4	402,174,120,78,	0,613,5221,5923,
#Partially deleted in new
chr17	81246614	81285714	chr17:81246614-81285714	0	-	81246614	81246614	8553170	14	59,177,120,489,168,157,107,112,183,103,125,144,94,865,	0,270,4878,5580,6458,13623,24303,25901,29354,30416,33994,35574,36794,38235,
#Deleted in new
chr17	81250876	81252503	chr17:81250876-81252503	0	-	81250876	81250876	8553170	1	1627,	0,
#Deleted in new
chr17	81251193	81251803	chr17:81251193-81251803	3	+	81251193	81251193	8553170	1	610,	0,
#Partially deleted in new
chr17	81251195	81295267	chr17:81251195-81295267	3	-	81251214	81294921	789624	14	417,489,168,157,107,112,183,103,125,144,94,46,118,445,	0,999,1877,9042,19722,21320,24773,25835,29413,30993,32213,33654,38495,43627,
#Partially deleted in new
chr17	81260360	81282216	chr17:81260360-81282216	0	-	81260360	81260360	8553170	6	34,107,183,103,125,28,	0,10557,15608,16670,20248,21828,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	81262919	81265401	chr17:81262919-81265401	3	+	81262919	81262919	8553170	1	2482,	0,
#Partially deleted in new
chr17	81279698	81282264	chr17:81279698-81282264	0	-	81280150	81282264	789624	3	462,125,76,	0,910,2490,
#Partially deleted in new
chr17	81282188	81295547	chr17:81282188-81295547	0	-	81282188	81289763	789624	5	144,94,46,118,126,	0,1220,2661,7502,13233,
#Partially deleted in new
chr17	81288732	81294914	chr17:81288732-81294914	0	-	81288732	81288732	8553170	3	213,118,92,	0,958,6090,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	81303770	81309248	chr17:81303770-81309248	3	-	81303770	81303770	789624	4	1592,152,215,64,	0,1895,3859,5414,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	81305325	81307727	chr17:81305325-81307727	0	-	81305325	81305325	8553170	3	37,326,98,	0,340,2304,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	81311269	81330674	chr17:81311269-81330674	0	-	81311269	81311269	8553170	3	2716,74,531,	0,3138,18874,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	81311273	81330674	chr17:81311273-81330674	3	-	81313650	81314462	789624	3	2712,74,531,	0,3134,18870,
#Partially deleted in new
chr17	81313752	81330415	chr17:81313752-81330415	0	-	81313752	81313752	8553170	3	167,74,272,	0,655,16391,
#Partially deleted in new
chr17	81323766	81330651	chr17:81323766-81330651	0	-	81323766	81323766	8553170	2	75,508,	0,6377,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	81327594	81330429	chr17:81327594-81330429	0	-	81327594	81327594	8553170	2	347,286,	0,2549,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	81327759	81329517	chr17:81327759-81329517	0	-	81327759	81327759	8553170	2	182,51,	0,1707,
#Partially deleted in new
chr17	81339182	81339691	chr17:81339182-81339691	3	-	81339182	81339182	8553170	1	509,	0,
#Deleted in new
chr17	81345475	81345966	chr17:81345475-81345966	3	-	81345475	81345475	8553170	1	491,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	81375143	81385464	chr17:81375143-81385464	3	-	81375143	81375143	8553170	6	1030,160,100,64,46,173,	0,4578,5341,6733,9985,10148,
#Partially deleted in new
chr17	81376000	81385360	chr17:81376000-81385360	0	-	81376000	81376000	8553170	4	173,160,100,232,	0,3721,4484,9128,
#Partially deleted in new
chr17	81376018	81379923	chr17:81376018-81379923	0	-	81376018	81376018	8553170	2	155,202,	0,3703,
#Partially deleted in new
chr17	81376021	81385129	chr17:81376021-81385129	0	-	81376021	81376021	8553170	4	152,160,100,184,	0,3700,4463,8924,
#Partially deleted in new
chr17	81376091	81380584	chr17:81376091-81380584	0	-	81376091	81376091	8553170	3	82,160,100,	0,3630,4393,
#Partially deleted in new
chr17	81379597	81385246	chr17:81379597-81385246	0	-	81379597	81379597	8553170	4	284,100,64,118,	0,887,2279,5531,
#Partially deleted in new
chr17	81379666	81385221	chr17:81379666-81385221	1	-	81379666	81379666	8553170	5	215,100,64,87,93,	0,818,2210,5279,5462,
#Deleted in new
chr17	81387414	81387766	chr17:81387414-81387766	3	+	81387414	81387414	8553170	1	352,	0,
#Deleted in new
chr17	81388125	81390256	chr17:81388125-81390256	3	-	81388125	81388125	8553170	2	1198,367,	0,1764,
#Deleted in new
chr17	81388130	81390124	chr17:81388130-81390124	0	-	81388130	81388130	8553170	2	179,235,	0,1759,
#Deleted in new
chr17	81395608	81397144	chr17:81395608-81397144	3	-	81395608	81395608	8553170	1	1536,	0,
#Partially deleted in new
chr17	81399739	81466332	chr17:81399739-81466332	1	+	81399739	81463817	789624	27	178,180,123,1734,109,188,159,164,328,813,203,137,129,124,289,183,302,105,157,115,76,109,120,177,1181,237,2722,	0,27060,38630,42091,44069,44641,44928,45275,45614,47296,51928,52231,52983,55527,56557,57670,58425,58881,59073,59314,59513,59756,60537,60790,61126,63000,63871,
#Deleted in new
chr17	81399773	81401858	chr17:81399773-81401858	0	+	81399773	81399773	8553170	2	144,447,	0,1638,
#Deleted in new
chr17	81400715	81400778	chr17:81400715-81400778	3	-	81400715	81400715	5263520	1	63,	0,
#Deleted in new
chr17	81401089	81402979	chr17:81401089-81402979	0	+	81401089	81401089	8553170	1	1890,	0,
#Deleted in new
chr17	81443464	81444273	chr17:81443464-81444273	0	+	81443464	81443464	8553170	2	100,465,	0,344,
#Deleted in new
chr17	81451103	81451188	chr17:81451103-81451188	3	-	81451103	81451103	5263520	1	85,	0,
#Deleted in new
chr17	81456157	81458361	chr17:81456157-81458361	0	+	81456157	81456157	8553170	3	428,183,197,	0,1252,2007,
#Deleted in new
chr17	81459390	81461192	chr17:81459390-81461192	0	+	81459390	81459390	8553170	4	214,120,177,303,	0,886,1139,1499,
#Deleted in new
chr17	81461012	81461937	chr17:81461012-81461937	3	-	81461012	81461012	8553170	2	151,273,	0,652,
#Deleted in new
chr17	81462558	81463755	chr17:81462558-81463755	0	+	81462558	81462558	8553170	2	418,145,	0,1052,
#Deleted in new
chr17	81480522	81481570	chr17:81480522-81481570	3	-	81480522	81480522	8553170	1	1048,	0,
#Deleted in new
chr17	81509970	81512891	chr17:81509970-81512891	3	-	81510689	81512354	0	6	863,182,439,240,129,158,	0,956,1217,1932,2261,2763,
#Deleted in new
chr17	81509970	81512799	chr17:81509970-81512799	1	-	81510689	81512354	0	6	863,182,439,240,129,66,	0,956,1217,1932,2261,2763,
#Deleted in new
chr17	81509972	81512755	chr17:81509972-81512755	1	-	81510689	81512354	0	7	357,354,182,439,240,129,22,	0,507,954,1215,1930,2259,2761,
#Deleted in new
chr17	81509988	81512781	chr17:81509988-81512781	1	-	81510689	81512354	0	5	845,182,439,240,550,	0,938,1199,1914,2243,
#Deleted in new
chr17	81509991	81512780	chr17:81509991-81512780	0	-	81509991	81509991	8553170	5	842,700,240,129,47,	0,935,1911,2240,2742,
#Deleted in new
chr17	81509998	81511848	chr17:81509998-81511848	0	-	81509998	81509998	8553170	3	835,182,661,	0,928,1189,
#Deleted in new
chr17	81510004	81512150	chr17:81510004-81512150	0	-	81510004	81510004	8553170	4	829,182,439,248,	0,922,1183,1898,
#Deleted in new
chr17	81510007	81512790	chr17:81510007-81512790	1	-	81510689	81512354	0	6	826,182,439,240,129,185,	0,919,1180,1895,2224,2598,
#Deleted in new
chr17	81510012	81512791	chr17:81510012-81512791	0	-	81510689	81512354	0	7	317,355,182,439,240,129,58,	0,466,914,1175,1890,2219,2721,
#Deleted in new
chr17	81510488	81512818	chr17:81510488-81512818	1	-	81510689	81512354	0	6	345,182,439,240,129,204,	0,438,699,1414,1743,2126,
#Deleted in new
chr17	81510744	81512781	chr17:81510744-81512781	0	-	81511433	81512354	789624	7	89,182,439,41,240,129,48,	0,182,443,1018,1158,1487,1989,
#Deleted in new
chr17	81511084	81512748	chr17:81511084-81512748	0	-	81511084	81511084	8553170	5	24,616,240,129,15,	0,103,818,1147,1649,
#Deleted in new
chr17	81511237	81512763	chr17:81511237-81512763	0	-	81511237	81512354	789624	4	389,213,129,30,	0,665,994,1496,
#Partially deleted in new
chr17	81511345	81523847	chr17:81511345-81523847	0	-	81511345	81512354	789624	4	281,240,129,206,	0,557,886,12296,
#Deleted in new
chr17	81511347	81514640	chr17:81511347-81514640	0	-	81511347	81512354	789624	4	279,240,129,94,	0,555,884,3199,
#Deleted in new
chr17	81511497	81512778	chr17:81511497-81512778	0	-	81511497	81512354	789624	4	129,240,129,315,	0,405,734,966,
#Deleted in new
chr17	81511518	81512799	chr17:81511518-81512799	0	-	81511518	81512354	789624	4	60,216,129,66,	0,408,713,1215,
#Partially deleted in new
chr17	81514046	81527243	chr17:81514046-81527243	0	+	81514046	81514046	8553170	2	174,187,	0,13010,
#Partially deleted in new
chr17	81519039	81527776	chr17:81519039-81527776	3	+	81519039	81519039	8553170	2	63,720,	0,8017,
#Partially deleted in new
chr17	81528395	81537130	chr17:81528395-81537130	3	+	81528531	81537080	789624	5	962,157,122,168,256,	0,6656,7750,8226,8479,
#Partially deleted in new
chr17	81528531	81537080	chr17:81528531-81537080	1	+	81528531	81537080	789624	5	826,157,122,240,206,	0,6520,7614,8018,8343,
#Deleted in new
chr17	81536145	81536956	chr17:81536145-81536956	0	+	81536145	81536145	8553170	2	644,82,	0,729,
#Partially deleted in new
chr17	81539884	81552377	chr17:81539884-81552377	3	-	81540818	81552330	789624	9	1066,87,117,137,770,157,956,125,212,	0,1424,4119,5861,7024,9321,10363,12043,12281,
#Partially deleted in new
chr17	81539884	81552376	chr17:81539884-81552376	0	-	81551923	81552330	789624	9	1066,87,117,137,770,157,956,321,211,	0,1424,4119,5861,7024,9321,10363,11847,12281,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	81539885	81548498	chr17:81539885-81548498	1	-	81540818	81548028	789624	5	1065,87,117,137,1590,	0,1423,4118,5860,7023,
#Partially deleted in new
chr17	81544003	81547203	chr17:81544003-81547203	0	-	81546502	81547203	789624	4	117,137,140,295,	0,1742,2397,2905,
#Deleted in new
chr17	81549253	81553109	chr17:81549253-81553109	0	-	81549253	81551040	789624	3	109,956,36,	0,994,3820,
#Deleted in new
chr17	81550291	81553127	chr17:81550291-81553127	0	-	81550291	81551040	789624	3	912,125,54,	0,1636,2782,
#Deleted in new
chr17	81550796	81553961	chr17:81550796-81553961	0	-	81550796	81553554	789624	2	407,517,	0,2648,
#Partially deleted in new
chr17	81556886	81637146	chr17:81556886-81637146	3	-	81559258	81636930	789624	17	2530,103,117,96,72,161,127,72,87,180,124,95,49,177,113,81,231,	0,8618,10530,12129,15130,32057,39229,40358,43454,47661,49804,51841,53323,56431,65279,72838,80029,
#Partially deleted in new
chr17	81558788	81566602	chr17:81558788-81566602	1	-	81559308	81565567	789624	3	628,103,215,	0,6716,7599,
#Partially deleted in new
chr17	81559013	81560889	chr17:81559013-81560889	0	-	81559013	81559013	8553170	2	403,169,	0,1707,
#Partially deleted in new
chr17	81559063	81566985	chr17:81559063-81566985	0	-	81559063	81559063	8553170	3	353,103,111,	0,6441,7811,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	81559090	81569064	chr17:81559090-81569064	0	-	81559308	81569064	789624	5	326,59,103,117,49,	0,4830,6414,8326,9925,
#Partially deleted in new
chr17	81559124	81566635	chr17:81559124-81566635	1	-	81559308	81565567	789624	3	292,103,165,	0,6380,7346,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	81559181	81572073	chr17:81559181-81572073	0	-	81559308	81572073	789624	6	235,68,103,117,96,57,	0,1380,6323,8235,9834,12835,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	81559315	81569102	chr17:81559315-81569102	0	-	81563542	81569102	789624	5	101,156,103,117,87,	0,4097,6189,8101,9700,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	81559395	81572108	chr17:81559395-81572108	0	-	81559395	81559395	8553170	6	21,103,117,142,96,92,	0,6109,8021,8538,9620,12621,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr17	81561765	81637060	chr17:81561765-81637060	1	-	81565319	81636930	789624	16	3842,117,96,72,161,127,72,87,180,124,95,49,177,113,81,145,	0,5651,7250,10251,27178,34350,35479,38575,42782,44925,46962,48444,51552,60400,67959,75150,
#Partially deleted in new
chr17	81564212	81567495	chr17:81564212-81567495	0	-	81564212	81564212	8553170	3	34,103,79,	0,1292,3204,
#Partially deleted in new
chr17	81564908	81637079	chr17:81564908-81637079	0	-	81608800	81636930	789624	15	699,117,96,72,161,127,72,87,180,124,95,177,113,81,164,	0,2508,4107,7108,24035,31207,32336,35432,39639,41782,43819,48409,57257,64816,72007,
#Partially deleted in new
chr17	81588090	81597319	chr17:81588090-81597319	0	-	81588090	81588090	8553170	4	97,161,127,75,	0,853,8025,9154,
#Partially deleted in new
chr17	81604571	81613402	chr17:81604571-81613402	0	-	81606772	81613402	789624	4	156,124,49,85,	0,2119,5638,8746,
#Partially deleted in new
chr17	81604608	81608912	chr17:81604608-81608912	0	-	81604608	81604608	8553170	3	119,124,185,	0,2082,4119,
#Partially deleted in new
chr17	81604663	81614381	chr17:81604663-81614381	0	-	81604663	81604663	8553170	6	64,124,95,49,177,64,	0,2027,4064,5546,8654,9654,
#Partially deleted in new
chr17	81608800	81629875	chr17:81608800-81629875	1	-	81608800	81629875	789624	5	22,177,113,81,12,	0,4517,13365,20924,21063,
#Partially deleted in new
chr17	81608810	81648465	chr17:81608810-81648465	0	-	81608810	81608810	8553170	6	109,49,177,113,81,36,	0,1399,4507,13355,20914,39619,
#Partially deleted in new
chr17	81612678	81613347	chr17:81612678-81613347	0	-	81612678	81612678	8553170	3	195,76,30,	0,371,639,
#Partially deleted in new
chr17	81636396	81637110	chr17:81636396-81637110	0	-	81636396	81636396	8553170	2	82,195,	0,519,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	81637170	81639177	chr17:81637170-81639177	0	+	81637170	81637170	8553170	2	236,1660,	0,347,
#Partially deleted in new
chr17	81637197	81648748	chr17:81637197-81648748	3	+	81637398	81648294	789624	4	209,142,638,848,	0,5109,7794,10703,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	81642322	81646581	chr17:81642322-81646581	0	+	81642322	81642322	8553170	2	126,1590,	0,2669,
#Partially deleted in new
chr17	81642335	81648749	chr17:81642335-81648749	0	+	81642412	81647490	789624	4	113,638,268,849,	0,2656,5121,5565,
#Partially deleted in new
chr17	81642412	81648294	chr17:81642412-81648294	1	+	81642412	81648294	789624	3	36,638,394,	0,2579,5488,
#Partially deleted in new
chr17	81650458	81656583	chr17:81650458-81656583	1	-	81651073	81653305	0	4	692,41,205,91,	0,1186,2701,6034,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	81650458	81657059	chr17:81650458-81657059	1	-	81651073	81656583	789624	4	692,41,205,567,	0,1186,2701,6034,
#Partially deleted in new
chr17	81650458	81656571	chr17:81650458-81656571	0	-	81651057	81656571	789624	3	692,41,79,	0,1186,6034,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	81650739	81663104	chr17:81650739-81663104	0	-	81650739	81650739	8553170	3	411,41,46,	0,905,12319,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	81650924	81663112	chr17:81650924-81663112	3	-	81651073	81653305	0	4	226,41,205,54,	0,720,2235,12134,
#Partially deleted in new
chr17	81650962	81653694	chr17:81650962-81653694	1	-	81651073	81653305	0	4	188,41,205,24,	0,682,2197,2708,
#Deleted in new
chr17	81665035	81666588	chr17:81665035-81666588	3	-	81665200	81666577	789624	2	549,71,	0,1482,
#Deleted in new
chr17	81665035	81666635	chr17:81665035-81666635	0	-	81665035	81665035	8553170	1	1600,	0,
#Deleted in new
chr17	81665055	81666146	chr17:81665055-81666146	0	-	81665055	81665055	789624	2	529,149,	0,942,
#Deleted in new
chr17	81665100	81666595	chr17:81665100-81666595	1	-	81666298	81666577	789624	2	484,319,	0,1176,
#Deleted in new
chr17	81665140	81666633	chr17:81665140-81666633	0	-	81666298	81666577	789624	2	444,479,	0,1014,
#Deleted in new
chr17	81665155	81666537	chr17:81665155-81666537	0	-	81666298	81666537	789624	2	429,392,	0,990,
#Deleted in new
chr17	81665460	81666578	chr17:81665460-81666578	0	-	81666298	81666577	789624	2	124,429,	0,689,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	81666363	81673899	chr17:81666363-81673899	3	+	81666766	81672704	789624	6	537,134,229,83,80,1405,	0,1365,3861,5380,5712,6131,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	81666751	81673904	chr17:81666751-81673904	0	+	81666766	81672704	789624	7	149,134,229,83,80,274,939,	0,977,3473,4992,5324,5743,6214,
#Partially deleted in new
chr17	81666754	81672685	chr17:81666754-81672685	0	+	81666766	81672685	789624	7	146,134,27,229,83,80,191,	0,974,3247,3470,4989,5321,5740,
#Partially deleted in new
chr17	81666771	81670291	chr17:81666771-81670291	0	+	81666771	81666904	789624	3	236,134,67,	0,957,3453,
#Partially deleted in new
chr17	81667768	81672721	chr17:81667768-81672721	0	+	81667768	81670321	789624	5	94,224,83,80,227,	0,2461,3975,4307,4726,
#Deleted in new
chr17	81671588	81672102	chr17:81671588-81672102	0	+	81671588	81671588	8553170	2	238,27,	0,487,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	81681173	81683924	chr17:81681173-81683924	1	-	81681707	81683825	789624	5	706,116,114,59,232,	0,860,1839,2362,2519,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	81681186	81683781	chr17:81681186-81683781	0	-	81681186	81681186	8553170	3	693,1561,89,	0,847,2506,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	81681186	81683763	chr17:81681186-81683763	3	-	81681707	81683753	789624	5	693,116,114,59,71,	0,847,1826,2349,2506,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	81681200	81683666	chr17:81681200-81683666	1	-	81681707	81682143	789624	3	679,116,74,	0,833,2392,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	81681219	81683743	chr17:81681219-81683743	0	-	81681219	81681219	8553170	5	660,642,114,59,51,	0,814,1793,2316,2473,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	81681219	81683924	chr17:81681219-81683924	1	-	81681707	81683825	789624	5	660,116,114,59,232,	0,814,1793,2316,2473,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	81681221	81683738	chr17:81681221-81683738	0	-	81681221	81681221	8553170	4	658,1093,59,46,	0,812,2314,2471,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	81681368	81683659	chr17:81681368-81683659	1	-	81681707	81682143	789624	3	511,116,124,	0,665,2167,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	81681465	81683659	chr17:81681465-81683659	1	-	81681707	81683060	789624	4	414,116,114,124,	0,568,1547,2070,
#Partially deleted in new
chr17	81681491	81683668	chr17:81681491-81683668	1	-	81681707	81683060	789624	4	388,116,114,76,	0,542,1521,2101,
#Partially deleted in new
chr17	81681522	81683734	chr17:81681522-81683734	0	-	81681522	81681522	8553170	4	357,116,114,199,	0,511,1490,2013,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	81681607	81683668	chr17:81681607-81683668	1	-	81681707	81682143	789624	5	272,116,185,114,76,	0,426,883,1405,1985,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	81681794	81683126	chr17:81681794-81683126	0	-	81682642	81683126	789624	4	85,116,233,114,	0,239,648,1218,
#Deleted in new
chr17	81682664	81683625	chr17:81682664-81683625	0	-	81682664	81682664	8553170	2	462,90,	0,871,
#Deleted in new
chr17	81682684	81683687	chr17:81682684-81683687	0	-	81682684	81682684	8553170	2	442,95,	0,908,
#Partially deleted in new
chr17	81683325	81688790	chr17:81683325-81688790	0	+	81687005	81688790	789624	5	303,85,76,93,87,	0,2279,2986,3677,5378,
#Partially deleted in new
chr17	81683931	81702119	chr17:81683931-81702119	3	+	81684066	81701618	0	22	172,85,76,93,124,53,69,125,79,99,96,39,144,60,214,173,141,175,134,120,87,612,	0,1673,2380,3071,4772,6250,6742,7515,9571,9722,9938,10883,10992,11232,11854,12425,12675,12892,16535,16763,17113,17576,
#Partially deleted in new
chr17	81683982	81690604	chr17:81683982-81690604	0	+	81683982	81683982	8553170	6	121,85,76,93,124,423,	0,1622,2329,3020,4721,6199,
#Partially deleted in new
chr17	81683983	81691830	chr17:81683983-81691830	0	+	81683983	81683983	8553170	8	120,85,76,93,124,53,69,384,	0,1621,2328,3019,4720,6198,6690,7463,
#Partially deleted in new
chr17	81684032	81693750	chr17:81684032-81693750	0	+	81684066	81693750	789624	10	71,85,76,93,76,53,69,125,79,97,	0,1572,2279,2970,4719,6149,6641,7414,9470,9621,
#Partially deleted in new
chr17	81684107	81688827	chr17:81684107-81688827	0	+	81687005	81688827	789624	5	338,85,76,93,124,	0,1497,2204,2895,4596,
#Deleted in new
chr17	81686266	81690830	chr17:81686266-81690830	0	+	81686266	81686266	8553170	5	121,93,124,53,157,	0,736,2437,3915,4407,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	81691205	81693014	chr17:81691205-81693014	0	+	81691205	81691205	8553170	1	1809,	0,
#Deleted in new
chr17	81693674	81695930	chr17:81693674-81695930	0	+	81693674	81693674	8553170	5	78,96,253,60,145,	0,195,1140,1489,2111,
#Deleted in new
chr17	81693756	81693869	chr17:81693756-81693869	3	+	81693756	81693756	5263520	1	113,	0,
#Deleted in new
chr17	81693869	81696987	chr17:81693869-81696987	0	+	81693869	81696987	789624	8	96,39,144,60,61,173,141,164,	0,945,1054,1294,2069,2487,2737,2954,
#Deleted in new
chr17	81695680	81696383	chr17:81695680-81696383	0	+	81695680	81695680	8553170	2	323,27,	0,676,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	81695955	81698356	chr17:81695955-81698356	0	+	81695955	81695955	8553170	1	2401,	0,
#Partially deleted in new
chr17	81696185	81702115	chr17:81696185-81702115	0	+	81696185	81696185	8553170	2	344,117,	0,5813,
#Partially deleted in new
chr17	81696600	81701127	chr17:81696600-81701127	0	+	81696600	81696600	8553170	4	398,134,120,83,	0,3866,4094,4444,
#Deleted in new
chr17	81697024	81697714	chr17:81697024-81697714	3	-	81697024	81697024	8553170	1	690,	0,
#Deleted in new
chr17	81700582	81701348	chr17:81700582-81701348	0	+	81700582	81701348	789624	4	18,120,87,105,	0,112,462,661,
#Deleted in new
chr17	81700791	81701974	chr17:81700791-81701974	0	+	81700791	81701618	789624	3	23,87,437,	0,253,746,
#Partially deleted in new
chr17	81701126	81703138	chr17:81701126-81703138	0	+	81701126	81701618	789624	3	5,210,308,	0,381,1704,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	81701323	81703300	chr17:81701323-81703300	3	-	81701323	81701323	8553170	1	1977,	0,
#Partially deleted in new
chr17	81703356	81707526	chr17:81703356-81707526	3	+	81703501	81707240	789624	5	219,187,84,135,403,	0,887,1276,3549,3767,
#Partially deleted in new
chr17	81703370	81720539	chr17:81703370-81720539	3	+	81703501	81720077	789624	15	205,187,84,135,90,108,115,49,42,44,71,93,78,57,564,	0,873,1262,3535,3753,11594,12107,12322,12638,13441,13631,14028,14413,16460,16605,
#Partially deleted in new
chr17	81712235	81721016	chr17:81712235-81721016	1	+	81712426	81720517	789624	11	284,120,115,49,42,44,71,10,78,57,1041,	0,2717,3242,3457,3773,4576,4766,5246,5548,7595,7740,
#Partially deleted in new
chr17	81712263	81720328	chr17:81712263-81720328	0	+	81712426	81713288	789624	12	256,245,120,115,49,42,44,71,93,78,57,353,	0,998,2689,3214,3429,3745,4548,4738,5135,5520,7567,7712,
#Partially deleted in new
chr17	81712306	81721012	chr17:81712306-81721012	1	+	81712426	81720077	789624	11	213,120,115,49,42,44,71,93,105,57,1037,	0,2646,3171,3386,3702,4505,4695,5092,5450,7524,7669,
#Partially deleted in new
chr17	81712340	81721012	chr17:81712340-81721012	3	+	81712426	81720077	789624	11	179,120,115,49,42,44,71,93,78,57,1037,	0,2612,3137,3352,3668,4471,4661,5058,5443,7490,7635,
#Partially deleted in new
chr17	81714960	81717852	chr17:81714960-81717852	0	+	81714960	81716702	789624	8	112,115,49,42,175,71,93,69,	0,517,732,1048,1720,2041,2438,2823,
#Partially deleted in new
chr17	81715017	81715814	chr17:81715017-81715814	0	+	81715017	81715017	8553170	3	55,115,116,	0,460,681,
#Partially deleted in new
chr17	81715920	81720007	chr17:81715920-81720007	0	+	81715920	81715920	8553170	7	130,44,71,93,168,57,32,	0,891,1081,1478,1773,3910,4055,
#Partially deleted in new
chr17	81715971	81720451	chr17:81715971-81720451	0	+	81715971	81715971	8553170	7	79,44,71,93,78,57,476,	0,840,1030,1427,1812,3859,4004,
#Partially deleted in new
chr17	81804131	81810391	chr17:81804131-81810391	0	+	81804131	81804131	8553170	3	118,237,610,	0,4710,5650,
#Partially deleted in new
chr17	81804133	81814013	chr17:81804133-81814013	3	+	81809018	81813689	0	14	116,237,103,108,122,107,157,160,61,70,89,139,42,540,	0,4708,5648,6691,6876,7088,7270,7517,7752,8049,8443,8673,8882,9340,
#Partially deleted in new
chr17	81804148	81813689	chr17:81804148-81813689	1	+	81809018	81813667	789624	12	101,237,103,108,122,107,407,61,70,89,251,216,	0,4693,5633,6676,6861,7073,7255,7737,8034,8428,8658,9325,
#Partially deleted in new
chr17	81805086	81810901	chr17:81805086-81810901	0	+	81809018	81810901	789624	4	147,237,103,77,	0,3755,4695,5738,
#Deleted in new
chr17	81809787	81811341	chr17:81809787-81811341	0	+	81809787	81809787	8553170	3	247,108,332,	0,1037,1222,
#Deleted in new
chr17	81811690	81812448	chr17:81811690-81812448	0	+	81811690	81811690	8553170	2	256,266,	0,492,
#Deleted in new
chr17	81822360	81826394	chr17:81822360-81826394	1	-	81823246	81826394	789624	6	547,103,102,119,56,15,	0,848,1051,1926,2138,4019,
#Partially deleted in new
chr17	81822410	81833268	chr17:81822410-81833268	1	-	81823246	81824506	789624	5	901,102,119,56,31,	0,1001,1876,2088,10827,
#Partially deleted in new
chr17	81822416	81833291	chr17:81822416-81833291	3	-	81823246	81824506	789624	6	491,103,102,119,56,54,	0,792,995,1870,2082,10821,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	81822416	81833268	chr17:81822416-81833268	1	-	81823246	81826394	789624	7	491,103,102,119,56,136,31,	0,792,995,1870,2082,3963,10821,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	81822416	81826662	chr17:81822416-81826662	1	-	81823246	81824506	789624	5	491,103,102,119,2164,	0,792,995,1870,2082,
#Partially deleted in new
chr17	81822428	81833302	chr17:81822428-81833302	1	-	81823246	81824506	789624	4	883,119,56,65,	0,1858,2070,10809,
#Deleted in new
chr17	81822453	81826194	chr17:81822453-81826194	1	-	81823246	81824506	789624	4	858,102,119,1696,	0,958,1833,2045,
#Deleted in new
chr17	81822800	81824546	chr17:81822800-81824546	1	-	81823246	81824506	789624	4	511,102,104,48,	0,611,1486,1698,
#Deleted in new
chr17	81822804	81823820	chr17:81822804-81823820	0	-	81822804	81822804	8553170	3	507,102,143,	0,607,873,
#Deleted in new
chr17	81822863	81824487	chr17:81822863-81824487	1	-	81823414	81824424	789624	3	448,102,201,	0,548,1423,
#Partially deleted in new
chr17	81823116	81833242	chr17:81823116-81833242	1	-	81823286	81824506	789624	4	397,119,56,5,	0,1170,1382,10121,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	81823125	81833256	chr17:81823125-81833256	1	-	81823246	81826394	789624	6	186,102,119,56,136,19,	0,286,1161,1373,3254,10112,
#Partially deleted in new
chr17	81833491	81835033	chr17:81833491-81835033	3	-	81833728	81834953	789624	3	361,151,270,	0,1011,1272,
#Deleted in new
chr17	81833492	81834019	chr17:81833492-81834019	0	-	81833492	81833492	8553170	2	360,60,	0,467,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	81833497	81835050	chr17:81833497-81835050	1	-	81834498	81834953	789624	2	1156,287,	0,1266,
#Partially deleted in new
chr17	81843158	81860694	chr17:81843158-81860694	3	-	81844011	81860471	0	11	934,87,182,121,201,126,105,138,134,207,368,	0,1985,2402,2712,3270,3788,4084,11983,12294,16022,17168,
#Partially deleted in new
chr17	81843160	81860566	chr17:81843160-81860566	0	-	81859347	81860471	789624	11	932,87,182,121,201,126,105,138,134,207,220,	0,1983,2400,2710,3268,3786,4082,11981,12292,16020,17186,
#Partially deleted in new
chr17	81843164	81843958	chr17:81843164-81843958	3	+	81843164	81843164	8553170	2	169,360,	0,434,
#Partially deleted in new
chr17	81843165	81847327	chr17:81843165-81847327	0	-	81844011	81847327	789624	7	927,87,182,121,201,66,85,	0,1978,2395,2705,3263,3781,4077,
#Partially deleted in new
chr17	81843458	81860535	chr17:81843458-81860535	1	-	81843512	81860471	789624	3	142,88,209,	0,15841,16868,
#Partially deleted in new
chr17	81843491	81845456	chr17:81843491-81845456	0	-	81843491	81843491	8553170	2	601,313,	0,1652,
#Partially deleted in new
chr17	81843948	81845822	chr17:81843948-81845822	0	-	81843948	81843948	8553170	3	144,87,262,	0,1195,1612,
#Partially deleted in new
chr17	81843960	81846671	chr17:81843960-81846671	0	-	81843960	81843960	8553170	5	132,87,182,121,243,	0,1183,1600,1910,2468,
#Partially deleted in new
chr17	81843993	81860560	chr17:81843993-81860560	1	-	81844011	81860471	789624	10	99,87,182,121,201,126,105,138,209,234,	0,1150,1567,1877,2435,2953,3249,11148,15185,16333,
#Partially deleted in new
chr17	81844065	81860532	chr17:81844065-81860532	0	-	81844065	81860471	789624	5	27,87,87,98,206,	0,1078,1495,15224,16261,
#Partially deleted in new
chr17	81845680	81846507	chr17:81845680-81846507	0	-	81845680	81845680	8553170	2	311,79,	0,748,
#Partially deleted in new
chr17	81846359	81855451	chr17:81846359-81855451	0	-	81846359	81846359	8553170	4	270,126,105,310,	0,587,883,8782,
#Partially deleted in new
chr17	81846430	81860514	chr17:81846430-81860514	0	-	81846430	81859213	789624	6	199,126,105,138,207,168,	0,516,812,8711,12750,13916,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	81846446	81856010	chr17:81846446-81856010	0	-	81846446	81846446	8553170	5	183,126,105,138,558,	0,500,796,8695,9006,
#Partially deleted in new
chr17	81846509	81859169	chr17:81846509-81859169	0	-	81846509	81846509	8553170	6	120,126,105,138,134,235,	0,437,733,8632,8943,12425,
#Partially deleted in new
chr17	81846542	81859215	chr17:81846542-81859215	0	-	81846542	81859213	789624	4	87,126,105,35,	0,404,700,12638,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	81846919	81847848	chr17:81846919-81847848	0	-	81846919	81846919	8553170	2	153,606,	0,323,
#Partially deleted in new
chr17	81846946	81859730	chr17:81846946-81859730	0	-	81846946	81846946	8553170	5	126,105,138,134,550,	0,296,8195,8506,12234,
#Partially deleted in new
chr17	81846970	81860535	chr17:81846970-81860535	0	-	81846970	81860471	789624	5	102,105,138,134,209,	0,272,8171,8482,13356,
#Partially deleted in new
chr17	81847031	81860533	chr17:81847031-81860533	0	-	81847031	81860471	789624	4	41,105,209,207,	0,211,12147,13295,
#Partially deleted in new
chr17	81847326	81860478	chr17:81847326-81860478	0	-	81847326	81860471	789624	5	21,138,53,207,152,	0,7815,8126,11854,13000,
#Partially deleted in new
chr17	81855188	81860573	chr17:81855188-81860573	0	-	81855188	81860471	789624	4	91,134,109,237,	0,264,3992,5148,
#Partially deleted in new
chr17	81855228	81860203	chr17:81855228-81860203	0	-	81855228	81855228	8553170	4	51,134,207,393,	0,224,3952,4582,
#Partially deleted in new
chr17	81855541	81860211	chr17:81855541-81860211	0	-	81855541	81855541	8553170	3	45,207,327,	0,3639,4343,
#Deleted in new
chr17	81858813	81860624	chr17:81858813-81860624	0	-	81858813	81858813	8553170	2	574,298,	0,1513,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	81862777	81863102	chr17:81862777-81863102	3	+	81862777	81862777	8553170	1	325,	0,
#Partially deleted in new
chr17	81867720	81871406	chr17:81867720-81871406	3	-	81868875	81869930	0	6	1355,64,77,84,217,109,	0,1452,1609,1821,2020,3577,
#Partially deleted in new
chr17	81867720	81868273	chr17:81867720-81868273	0	+	81867720	81867720	8553170	2	218,261,	0,292,
#Partially deleted in new
chr17	81867720	81868630	chr17:81867720-81868630	0	-	81867720	81867720	8553170	2	199,46,	0,864,
#Partially deleted in new
chr17	81867721	81868552	chr17:81867721-81868552	3	+	81867721	81867721	8553170	2	221,344,	0,487,
#Partially deleted in new
chr17	81867896	81871376	chr17:81867896-81871376	1	-	81868875	81869930	0	6	1047,64,77,84,217,79,	0,1276,1433,1645,1844,3401,
#Partially deleted in new
chr17	81868259	81871329	chr17:81868259-81871329	1	-	81868378	81869930	789624	7	325,87,64,77,84,217,32,	0,729,913,1070,1282,1481,3038,
#Partially deleted in new
chr17	81868339	81870974	chr17:81868339-81870974	1	-	81868875	81869930	0	6	736,64,77,84,217,339,	0,833,990,1202,1401,2296,
#Partially deleted in new
chr17	81868365	81870006	chr17:81868365-81870006	1	-	81868875	81869930	0	5	710,64,77,84,266,	0,807,964,1176,1375,
#Partially deleted in new
chr17	81868505	81870664	chr17:81868505-81870664	0	-	81868505	81869930	789624	7	79,87,64,77,84,217,29,	0,483,667,824,1036,1235,2130,
#Partially deleted in new
chr17	81868610	81871324	chr17:81868610-81871324	1	-	81868875	81869930	789624	3	465,217,27,	0,1130,2687,
#Partially deleted in new
chr17	81868630	81871337	chr17:81868630-81871337	0	-	81868630	81869930	789624	7	313,20,64,77,84,217,40,	0,425,542,699,911,1110,2667,
#Partially deleted in new
chr17	81868869	81871337	chr17:81868869-81871337	0	-	81868869	81868869	8553170	5	206,64,296,217,40,	0,303,460,871,2428,
#Partially deleted in new
chr17	81868921	81871325	chr17:81868921-81871325	0	-	81869231	81869930	789624	5	154,64,84,217,28,	0,251,620,819,2376,
#Partially deleted in new
chr17	81869003	81869451	chr17:81869003-81869451	0	-	81869003	81869003	8553170	2	72,279,	0,169,
#Partially deleted in new
chr17	81869048	81871326	chr17:81869048-81871326	0	-	81869231	81869930	789624	5	27,64,84,217,29,	0,124,493,692,2249,
#Partially deleted in new
chr17	81869165	81871329	chr17:81869165-81871329	0	-	81869165	81869165	8553170	4	241,84,217,32,	0,376,575,2132,
#Partially deleted in new
chr17	81869301	81871378	chr17:81869301-81871378	0	-	81869301	81869301	8553170	3	324,217,81,	0,439,1996,
#Partially deleted in new
chr17	81869437	81871337	chr17:81869437-81871337	0	-	81869437	81869437	8553170	2	520,40,	0,1860,
#Partially deleted in new
chr17	81869522	81870265	chr17:81869522-81870265	0	-	81869522	81869522	8553170	2	103,525,	0,218,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	81878424	81881106	chr17:81878424-81881106	3	-	81878424	81878424	8553170	1	2682,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	81878666	81879557	chr17:81878666-81879557	3	+	81878666	81878666	8553170	2	687,95,	0,796,
#Partially deleted in new
chr17	81887843	81891586	chr17:81887843-81891586	3	-	81888130	81891580	789624	6	302,178,64,148,132,264,	0,397,676,1338,2845,3479,
#Partially deleted in new
chr17	81888340	81888987	chr17:81888340-81888987	0	-	81888340	81888340	8553170	3	78,64,112,	0,179,535,
#Partially deleted in new
chr17	81888900	81891394	chr17:81888900-81891394	0	-	81888900	81888900	8553170	4	89,148,132,72,	0,281,1788,2422,
#Partially deleted in new
chr17	81889300	81891005	chr17:81889300-81891005	0	-	81889300	81889300	8553170	3	29,187,317,	0,482,1388,
#Partially deleted in new
chr17	81890789	81900255	chr17:81890789-81900255	3	+	81894477	81900065	0	4	62,63,120,336,	0,2762,3677,9130,
#Partially deleted in new
chr17	81891646	81900255	chr17:81891646-81900255	1	+	81894477	81900065	0	4	59,63,120,336,	0,1905,2820,8273,
#Partially deleted in new
chr17	81891712	81900533	chr17:81891712-81900533	1	+	81894535	81900100	789624	4	129,63,158,614,	0,1839,2754,8207,
#Partially deleted in new
chr17	81891719	81900252	chr17:81891719-81900252	1	+	81894477	81900065	0	3	122,120,333,	0,2747,8200,
#Partially deleted in new
chr17	81891720	81900533	chr17:81891720-81900533	1	+	81894477	81900065	0	4	121,63,120,614,	0,1831,2746,8199,
#Partially deleted in new
chr17	81891722	81900356	chr17:81891722-81900356	1	+	81894477	81900065	0	3	111,120,437,	0,2744,8197,
#Partially deleted in new
chr17	81891722	81900253	chr17:81891722-81900253	1	+	81894477	81894612	789624	3	111,158,334,	0,2744,8197,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	81891722	81894807	chr17:81891722-81894807	1	+	81894477	81894612	789624	3	119,63,341,	0,1829,2744,
#Partially deleted in new
chr17	81891731	81900356	chr17:81891731-81900356	1	+	81894477	81900065	0	4	102,63,120,437,	0,1820,2735,8188,
#Partially deleted in new
chr17	81891734	81900356	chr17:81891734-81900356	1	+	81894477	81900065	0	3	129,120,437,	0,2732,8185,
#Partially deleted in new
chr17	81891738	81900254	chr17:81891738-81900254	1	+	81894477	81900100	0	4	125,120,301,335,	0,2728,7503,8181,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	81891740	81894839	chr17:81891740-81894839	1	+	81894477	81894612	789624	3	123,63,373,	0,1811,2726,
#Partially deleted in new
chr17	81891745	81900254	chr17:81891745-81900254	1	+	81894477	81900065	0	4	118,63,120,335,	0,1806,2721,8174,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	81891749	81900159	chr17:81891749-81900159	1	+	81894477	81900065	0	5	92,84,63,120,240,	0,1354,1802,2717,8170,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	81891759	81900254	chr17:81891759-81900254	1	+	81894477	81900065	0	5	70,84,63,120,335,	0,1344,1792,2707,8160,
#Partially deleted in new
chr17	81891771	81900254	chr17:81891771-81900254	1	+	81894477	81894612	789624	3	70,158,335,	0,2695,8148,
#Partially deleted in new
chr17	81891937	81900254	chr17:81891937-81900254	1	+	81894477	81900065	0	4	169,63,120,335,	0,1614,2529,7982,
#Partially deleted in new
chr17	81892010	81899940	chr17:81892010-81899940	0	+	81894477	81899940	789624	5	96,63,120,86,21,	0,1541,2456,7231,7909,
#Partially deleted in new
chr17	81892062	81900254	chr17:81892062-81900254	1	+	81894477	81900065	0	3	44,120,335,	0,2404,7857,
#Partially deleted in new
chr17	81893554	81900104	chr17:81893554-81900104	1	+	81894477	81894612	789624	3	60,158,185,	0,912,6365,
#Partially deleted in new
chr17	81894297	81900991	chr17:81894297-81900991	1	+	81894477	81900065	0	2	289,1072,	0,5622,
#Deleted in new
chr17	81898119	81900255	chr17:81898119-81900255	0	+	81898119	81898119	8553170	1	2136,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	81900744	81902898	chr17:81900744-81902898	1	+	81902277	81902748	789624	1	2154,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	81900964	81911464	chr17:81900964-81911464	3	-	81904832	81911355	0	13	3980,89,66,66,78,83,139,45,85,67,162,89,198,	0,4101,4417,4705,5135,5499,5795,6589,6808,7603,7911,8549,10302,
#Deleted in new
chr17	81902108	81902905	chr17:81902108-81902905	3	+	81902277	81902748	789624	2	418,286,	0,511,
#Deleted in new
chr17	81904325	81911175	chr17:81904325-81911175	1	-	81904832	81908981	0	13	619,89,66,66,78,83,139,45,85,67,446,89,275,	0,740,1056,1344,1774,2138,2434,3228,3447,4242,4550,5188,6575,
#Deleted in new
chr17	81904342	81911406	chr17:81904342-81911406	1	-	81904832	81911355	0	14	602,89,66,66,78,83,139,54,45,85,67,162,89,140,	0,723,1039,1327,1757,2121,2417,2861,3211,3430,4225,4533,5171,6924,
#Deleted in new
chr17	81904366	81911413	chr17:81904366-81911413	1	-	81904832	81911355	789624	12	578,89,66,78,83,139,45,85,67,162,89,147,	0,699,1303,1733,2097,2393,3187,3406,4201,4509,5147,6900,
#Deleted in new
chr17	81904423	81911267	chr17:81904423-81911267	1	-	81904832	81909595	0	13	521,89,66,66,78,83,139,45,85,67,162,89,367,	0,642,958,1246,1676,2040,2336,3130,3349,4144,4452,5090,6477,
#Deleted in new
chr17	81904635	81905676	chr17:81904635-81905676	0	-	81904635	81904635	8553170	3	309,89,295,	0,430,746,
#Deleted in new
chr17	81904650	81907794	chr17:81904650-81907794	0	-	81904832	81907794	789624	8	294,89,66,66,83,139,45,22,	0,415,731,1019,1813,2109,2903,3122,
#Deleted in new
chr17	81904811	81911354	chr17:81904811-81911354	1	-	81904832	81908981	0	13	133,89,66,66,78,83,139,45,85,67,446,89,88,	0,254,570,858,1288,1652,1948,2742,2961,3756,4064,4702,6455,
#Deleted in new
chr17	81904875	81906177	chr17:81904875-81906177	0	-	81904875	81904875	8553170	4	69,89,66,508,	0,190,506,794,
#Deleted in new
chr17	81904897	81911418	chr17:81904897-81911418	0	-	81904897	81911355	789624	12	47,89,66,66,78,83,139,45,85,67,89,152,	0,168,484,772,1202,1566,1862,2656,2875,3670,4616,6369,
#Deleted in new
chr17	81905518	81906248	chr17:81905518-81906248	0	-	81905518	81905518	8553170	2	217,149,	0,581,
#Deleted in new
chr17	81905669	81911410	chr17:81905669-81911410	0	-	81905669	81911355	789624	9	66,78,83,139,85,67,162,89,144,	0,430,794,1090,2103,2898,3206,3844,5597,
#Deleted in new
chr17	81905680	81906829	chr17:81905680-81906829	0	-	81905680	81905680	8553170	3	55,447,70,	0,419,1079,
#Deleted in new
chr17	81906099	81911377	chr17:81906099-81911377	0	-	81910969	81911355	789624	11	78,83,139,54,45,85,67,162,89,115,111,	0,364,660,1104,1454,1673,2468,2776,3414,4801,5167,
#Deleted in new
chr17	81906144	81911388	chr17:81906144-81911388	0	-	81906144	81906144	8553170	8	33,83,139,304,67,162,89,122,	0,319,615,1409,2423,2731,3369,5122,
#Deleted in new
chr17	81907785	81911128	chr17:81907785-81911128	0	-	81907785	81908981	789624	6	72,67,162,160,89,228,	0,782,1090,1376,1728,3115,
#Deleted in new
chr17	81908877	81911432	chr17:81908877-81911432	0	-	81908877	81908981	789624	4	160,160,89,166,	0,284,636,2389,
#Deleted in new
chr17	81908918	81911175	chr17:81908918-81911175	0	-	81908918	81909595	789624	3	78,89,275,	0,595,1982,
#Partially deleted in new
chr17	81911938	81918194	chr17:81911938-81918194	3	-	81912415	81918131	0	10	676,107,81,237,99,73,71,105,138,156,	0,1835,2148,2355,2665,3501,3672,5676,5891,6100,
#Partially deleted in new
chr17	81911938	81918152	chr17:81911938-81918152	0	-	81911938	81911938	8553170	8	676,107,81,1219,71,105,138,114,	0,1835,2148,2355,3672,5676,5891,6100,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	81911938	81917153	chr17:81911938-81917153	0	-	81911938	81911938	8553170	6	676,107,418,99,73,1543,	0,1835,2148,2665,3501,3672,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	81911938	81916452	chr17:81911938-81916452	0	-	81911938	81911938	8553170	4	1942,81,409,1013,	0,2148,2355,3501,
#Deleted in new
chr17	81913576	81914250	chr17:81913576-81914250	0	-	81913576	81913576	8553170	2	304,164,	0,510,
#Deleted in new
chr17	81913773	81914691	chr17:81913773-81914691	0	-	81913773	81913773	8553170	2	394,398,	0,520,
#Deleted in new
chr17	81914051	81914726	chr17:81914051-81914726	0	-	81914051	81914051	8553170	2	116,433,	0,242,
#Partially deleted in new
chr17	81914086	81921323	chr17:81914086-81921323	0	-	81914086	81915472	789624	8	81,237,99,73,71,105,138,105,	0,207,517,1353,1524,3528,3743,7132,
#Partially deleted in new
chr17	81914134	81917814	chr17:81914134-81917814	0	-	81914134	81914134	8553170	6	33,237,99,73,71,200,	0,159,469,1305,1476,3480,
#Partially deleted in new
chr17	81914192	81917780	chr17:81914192-81917780	0	-	81914192	81914192	8553170	5	338,99,73,71,293,	0,411,1247,1418,3295,
#Partially deleted in new
chr17	81914293	81918162	chr17:81914293-81918162	0	-	81914293	81914293	8553170	6	409,73,71,105,138,124,	0,1146,1317,3321,3536,3745,
#Partially deleted in new
chr17	81914367	81918132	chr17:81914367-81918132	0	-	81914367	81914367	8553170	5	335,73,71,138,94,	0,1072,1243,3462,3671,
#Deleted in new
chr17	81914388	81915971	chr17:81914388-81915971	0	-	81914388	81914388	8553170	4	142,99,73,361,	0,215,1051,1222,
#Partially deleted in new
chr17	81914442	81918136	chr17:81914442-81918136	0	-	81916124	81918131	789624	8	88,99,73,71,82,105,138,98,	0,161,997,1168,1615,3172,3387,3596,
#Deleted in new
chr17	81914965	81915926	chr17:81914965-81915926	0	-	81914965	81914965	8553170	2	547,316,	0,645,
#Partially deleted in new
chr17	81915255	81918152	chr17:81915255-81918152	0	-	81915255	81915255	8553170	5	257,71,105,138,114,	0,355,2359,2574,2783,
#Partially deleted in new
chr17	81915335	81918132	chr17:81915335-81918132	0	-	81915335	81915335	8553170	4	177,71,105,303,	0,275,2279,2494,
#Deleted in new
chr17	81917362	81918116	chr17:81917362-81918116	0	-	81917362	81917362	8553170	2	605,78,	0,676,
#Deleted in new
chr17	81917364	81918148	chr17:81917364-81918148	0	-	81917364	81917364	8553170	2	355,110,	0,674,
#Deleted in new
chr17	81917767	81918153	chr17:81917767-81918153	0	-	81917767	81917767	8553170	2	200,115,	0,271,
#Partially deleted in new
chr17	81918269	81927714	chr17:81918269-81927714	3	-	81922604	81923185	789624	3	4788,65,187,	0,4880,9258,
#Deleted in new
chr17	81921559	81923532	chr17:81921559-81923532	1	-	81922604	81923185	789624	3	1498,65,180,	0,1590,1793,
#Partially deleted in new
chr17	81922797	81927708	chr17:81922797-81927708	0	-	81922797	81923185	789624	4	260,65,64,181,	0,352,555,4730,
#Deleted in new
chr17	81922898	81924511	chr17:81922898-81924511	3	+	81922898	81922898	8553170	3	334,136,93,	0,1180,1520,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	81927828	81930753	chr17:81927828-81930753	1	+	81927828	81927828	789624	2	617,1278,	0,1647,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	81928400	81930517	chr17:81928400-81930517	3	+	81928400	81928400	8553170	3	45,384,540,	0,1075,1577,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	81932383	81936879	chr17:81932383-81936879	1	-	81933213	81936814	0	7	993,164,93,222,180,71,132,	0,1942,2269,2542,2953,3739,4364,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	81932383	81937257	chr17:81932383-81937257	1	-	81932879	81936814	0	8	580,70,164,93,222,180,71,510,	0,923,1942,2269,2542,2953,3739,4364,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	81932383	81937328	chr17:81932383-81937328	1	-	81933213	81936814	789624	7	993,164,222,180,71,114,67,	0,1942,2542,2953,3739,4364,4878,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	81932383	81937328	chr17:81932383-81937328	3	-	81933213	81936814	0	8	993,164,93,222,180,71,114,67,	0,1942,2269,2542,2953,3739,4364,4878,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	81932383	81937328	chr17:81932383-81937328	1	-	81933355	81936814	789624	7	993,93,222,180,71,114,67,	0,2269,2542,2953,3739,4364,4878,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	81932397	81933058	chr17:81932397-81933058	3	+	81932397	81932397	8553170	2	387,63,	0,598,
#Partially deleted in new
chr17	81932920	81936869	chr17:81932920-81936869	1	-	81933355	81936814	789624	6	456,93,222,180,71,122,	0,1732,2005,2416,3202,3827,
#Partially deleted in new
chr17	81932928	81936775	chr17:81932928-81936775	0	-	81933355	81936775	789624	5	448,222,180,71,28,	0,1997,2408,3194,3819,
#Partially deleted in new
chr17	81932934	81937239	chr17:81932934-81937239	1	-	81933213	81937213	0	8	442,164,93,222,180,71,114,60,	0,1391,1718,1991,2402,3188,3813,4245,
#Partially deleted in new
chr17	81933355	81942412	chr17:81933355-81942412	0	-	81933355	81936170	789624	7	21,164,93,222,180,71,117,	0,970,1297,1570,1981,2767,8940,
#Partially deleted in new
chr17	81934363	81937296	chr17:81934363-81937296	0	-	81934363	81936814	789624	7	126,93,222,180,71,114,35,	0,289,562,973,1759,2384,2898,
#Partially deleted in new
chr17	81934445	81937300	chr17:81934445-81937300	0	-	81934445	81936814	789624	7	44,93,222,180,71,114,43,	0,207,480,891,1677,2302,2812,
#Partially deleted in new
chr17	81934705	81937327	chr17:81934705-81937327	0	-	81934705	81936814	789624	5	40,219,71,114,66,	0,220,1417,2042,2556,
#Partially deleted in new
chr17	81934970	81937257	chr17:81934970-81937257	0	-	81934970	81936814	789624	5	177,180,71,114,30,	0,366,1152,1777,2257,
#Partially deleted in new
chr17	81935047	81941079	chr17:81935047-81941079	0	-	81935047	81936170	789624	4	100,180,71,330,	0,289,1075,5702,
#Partially deleted in new
chr17	81935119	81937662	chr17:81935119-81937662	0	-	81935119	81936814	789624	5	28,180,71,114,135,	0,217,1003,1628,2408,
#Partially deleted in new
chr17	81935371	81937239	chr17:81935371-81937239	0	-	81935371	81936814	789624	4	145,71,114,47,	0,751,1376,1821,
#Partially deleted in new
chr17	81935402	81937248	chr17:81935402-81937248	0	-	81935402	81936814	789624	4	114,71,114,279,	0,720,1345,1567,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	81939644	81947233	chr17:81939644-81947233	3	-	81940817	81941741	789624	3	2199,78,175,	0,2651,7414,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	81941868	81947601	chr17:81941868-81947601	3	+	81941868	81941868	8553170	2	227,464,	0,5269,
#Partially deleted in new
chr17	81952506	81961293	chr17:81952506-81961293	3	-	81952960	81960909	0	11	761,48,148,101,192,103,59,61,96,53,707,	0,1749,2890,4143,4376,5299,5828,6428,6964,7133,8080,
#Deleted in new
chr17	81955514	81959810	chr17:81955514-81959810	0	-	81955514	81959516	789624	8	30,101,192,103,59,61,96,171,	0,1135,1368,2291,2820,3420,3956,4125,
#Deleted in new
chr17	81956882	81961840	chr17:81956882-81961840	0	-	81956882	81960909	789624	8	192,103,59,61,96,53,335,97,	0,923,1452,2052,2588,2757,3704,4861,
#Deleted in new
chr17	81958934	81960873	chr17:81958934-81960873	0	-	81958934	81958934	8553170	3	632,53,287,	0,705,1652,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	81965631	81966589	chr17:81965631-81966589	3	-	81965631	81965631	8553170	1	958,	0,
#Partially deleted in new
chr17	81976806	81996843	chr17:81976806-81996843	0	+	81976886	81996843	789624	7	173,56,115,101,58,74,424,	0,2377,6747,8700,18014,19185,19613,
#Partially deleted in new
chr17	81977549	82017404	chr17:81977549-82017404	1	+	81977646	82017322	0	17	199,56,115,101,58,74,427,155,82,67,63,53,282,52,70,173,96,	0,1634,6004,7957,17271,18442,18870,31487,31936,33252,33993,34681,37525,38926,39250,39391,39759,
#Partially deleted in new
chr17	81977549	82017406	chr17:81977549-82017406	3	+	81977646	82017322	0	16	199,56,115,101,58,74,427,155,82,67,63,53,52,70,173,98,	0,1634,6004,7957,17271,18442,18870,31487,31936,33252,33993,34681,38926,39250,39391,39759,
#Partially deleted in new
chr17	81977601	81996846	chr17:81977601-81996846	0	+	81977646	81982632	789624	8	147,56,63,115,101,58,74,427,	0,1582,5012,5952,7905,17219,18390,18818,
#Partially deleted in new
chr17	81977630	81995150	chr17:81977630-81995150	1	+	81977646	81994995	789624	5	118,56,115,101,330,	0,1553,5923,7876,17190,
#Partially deleted in new
chr17	81977633	82017404	chr17:81977633-82017404	1	+	81983626	82017322	0	15	115,115,101,58,74,427,155,82,67,63,128,52,70,173,96,	0,5920,7873,17187,18358,18786,31403,31852,33168,33909,34522,38842,39166,39307,39675,
#Partially deleted in new
chr17	81977640	82010825	chr17:81977640-82010825	0	+	81977646	82009145	789624	7	108,56,115,101,155,82,24,	0,1543,5913,7866,31396,31845,33161,
#Partially deleted in new
chr17	81977704	81995147	chr17:81977704-81995147	0	+	81977704	81995147	789624	6	44,56,115,101,58,190,	0,1479,5849,7802,17116,17253,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	81977898	81983626	chr17:81977898-81983626	0	+	81983612	81983626	8553170	3	906,56,73,	0,1285,5655,
#Partially deleted in new
chr17	81995442	82017037	chr17:81995442-82017037	0	+	81996426	82017037	789624	11	106,74,427,155,82,67,63,53,52,70,97,	0,549,977,13594,14043,15359,16100,16788,21033,21357,21498,
#Partially deleted in new
chr17	82004344	82017404	chr17:82004344-82017404	0	+	82004344	82004344	8553170	9	4847,82,67,63,53,52,70,173,96,	0,5141,6457,7198,7886,12131,12455,12596,12964,
#Partially deleted in new
chr17	82006641	82017404	chr17:82006641-82017404	0	+	82006641	82006641	8553170	8	2550,82,67,63,53,52,314,96,	0,2844,4160,4901,5589,9834,10158,10667,
#Partially deleted in new
chr17	82007434	82017403	chr17:82007434-82017403	0	+	82007434	82007434	8553170	9	1757,82,67,63,53,52,70,148,95,	0,2051,3367,4108,4796,9041,9365,9506,9874,
#Partially deleted in new
chr17	82009485	82017369	chr17:82009485-82017369	0	+	82009485	82009485	8553170	6	82,67,63,53,658,61,	0,1316,2057,2745,6990,7823,
#Deleted in new
chr17	82010810	82017403	chr17:82010810-82017403	0	+	82010810	82017403	789624	7	58,63,53,52,70,148,95,	0,732,1420,5665,5989,6130,6498,
#Deleted in new
chr17	82012083	82017403	chr17:82012083-82017403	0	+	82012083	82012083	8553170	5	200,52,70,173,95,	0,4392,4716,4857,5225,
#Deleted in new
chr17	82012881	82017401	chr17:82012881-82017401	0	+	82012881	82012881	8553170	5	169,52,70,148,93,	0,3594,3918,4059,4427,
#Deleted in new
chr17	82013233	82017404	chr17:82013233-82017404	0	+	82013233	82013233	8553170	2	3880,96,	0,4075,
#Deleted in new
chr17	82015213	82017404	chr17:82015213-82017404	0	+	82015213	82015213	8553170	5	143,52,70,173,96,	0,1262,1586,1727,2095,
#Deleted in new
chr17	82016193	82017370	chr17:82016193-82017370	0	+	82016193	82016193	8553170	5	115,52,70,148,62,	0,282,606,747,1115,
#Deleted in new
chr17	82018701	82024107	chr17:82018701-82024107	0	-	82019204	82024107	789624	4	518,89,52,43,	0,591,1156,5363,
#Deleted in new
chr17	82018702	82022918	chr17:82018702-82022918	1	-	82019204	82022861	0	4	517,89,52,93,	0,590,1155,4123,
#Deleted in new
chr17	82018702	82022918	chr17:82018702-82022918	3	-	82019204	82022861	0	5	517,89,54,52,93,	0,590,938,1155,4123,
#Deleted in new
chr17	82018702	82022892	chr17:82018702-82022892	1	-	82019204	82022861	0	4	517,74,52,67,	0,605,1155,4123,
#Deleted in new
chr17	82018702	82022858	chr17:82018702-82022858	0	-	82019204	82022858	789624	5	517,74,54,52,33,	0,605,938,1155,4123,
#Deleted in new
chr17	82018715	82022821	chr17:82018715-82022821	0	-	82018715	82018715	8553170	5	504,89,54,52,183,	0,577,925,1142,3923,
#Deleted in new
chr17	82018800	82022879	chr17:82018800-82022879	1	-	82019185	82022861	789624	5	419,89,185,52,54,	0,492,709,1057,4025,
#Deleted in new
chr17	82018837	82022849	chr17:82018837-82022849	0	-	82018837	82018837	8553170	4	544,54,52,211,	0,803,1020,3801,
#Deleted in new
chr17	82018843	82022873	chr17:82018843-82022873	0	-	82018843	82018843	8553170	4	376,89,52,235,	0,449,1014,3795,
#Deleted in new
chr17	82018865	82022852	chr17:82018865-82022852	0	-	82018865	82018865	8553170	5	354,89,185,52,214,	0,427,644,992,3773,
#Deleted in new
chr17	82019156	82022884	chr17:82019156-82022884	0	-	82019156	82019156	8553170	3	63,617,59,	0,136,3669,
#Partially deleted in new
chr17	82023301	82031151	chr17:82023301-82031151	3	+	82023643	82030805	789624	17	562,62,71,179,129,113,59,78,136,78,112,71,93,93,174,148,543,	0,976,1391,1698,2077,3597,4084,4372,4709,4932,5095,5311,5791,6241,6763,7017,7307,
#Deleted in new
chr17	82023320	82025425	chr17:82023320-82025425	0	+	82023320	82023320	8553170	4	543,71,179,47,	0,1372,1679,2058,
#Deleted in new
chr17	82023921	82025440	chr17:82023921-82025440	0	+	82025422	82025440	8553170	4	418,71,179,62,	0,771,1078,1457,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	82026805	82029232	chr17:82026805-82029232	0	+	82026805	82026805	8553170	7	206,59,78,136,78,112,620,	0,580,868,1205,1428,1591,1807,
#Deleted in new
chr17	82027006	82030632	chr17:82027006-82030632	0	+	82027006	82029045	789624	12	5,59,78,136,78,112,71,167,93,174,148,24,	0,379,667,1004,1227,1390,1606,2012,2536,3058,3312,3602,
#Deleted in new
chr17	82028740	82030146	chr17:82028740-82030146	0	+	82028740	82028740	8553170	2	445,82,	0,1324,
#Deleted in new
chr17	82031623	82034202	chr17:82031623-82034202	3	+	82031761	82033829	0	6	173,72,118,63,160,504,	0,763,1087,1323,1816,2075,
#Deleted in new
chr17	82032060	82033790	chr17:82032060-82033790	0	+	82032735	82033790	789624	5	398,118,63,160,92,	0,650,886,1379,1638,
#Deleted in new
chr17	82032183	82033772	chr17:82032183-82033772	0	+	82032735	82033772	789624	5	315,118,63,160,74,	0,527,763,1256,1515,
#Deleted in new
chr17	82032877	82034204	chr17:82032877-82034204	0	+	82032877	82032877	8553170	3	132,160,506,	0,562,821,
#Partially deleted in new
chr17	82035135	82036995	chr17:82035135-82036995	0	-	82035177	82036995	789624	6	110,118,65,100,43,137,	0,1055,1248,1408,1585,1723,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	82035402	82035800	chr17:82035402-82035800	3	-	82035402	82035402	8553170	1	398,	0,
#Deleted in new
chr17	82035857	82037732	chr17:82035857-82037732	3	-	82035959	82037682	0	8	206,118,65,100,43,155,98,102,	0,333,526,686,863,1001,1592,1773,
#Deleted in new
chr17	82035878	82036412	chr17:82035878-82036412	0	-	82035959	82036412	789624	3	185,127,29,	0,303,505,
#Deleted in new
chr17	82035878	82037681	chr17:82035878-82037681	0	-	82035878	82035878	8553170	7	185,118,65,100,43,689,51,	0,312,505,665,842,980,1752,
#Deleted in new
chr17	82035878	82037698	chr17:82035878-82037698	0	-	82035878	82035878	8553170	7	185,118,65,100,43,155,249,	0,312,505,665,842,980,1571,
#Deleted in new
chr17	82035880	82036635	chr17:82035880-82036635	0	-	82035880	82035880	8553170	3	183,118,252,	0,310,503,
#Deleted in new
chr17	82035880	82036987	chr17:82035880-82036987	0	-	82035880	82035880	8553170	5	183,118,65,220,129,	0,310,503,663,978,
#Deleted in new
chr17	82035880	82037697	chr17:82035880-82037697	0	-	82035880	82035880	8553170	5	183,573,155,98,67,	0,310,978,1569,1750,
#Deleted in new
chr17	82035895	82037681	chr17:82035895-82037681	0	-	82035895	82035895	8553170	6	168,453,43,155,98,51,	0,295,825,963,1554,1735,
#Deleted in new
chr17	82035903	82036928	chr17:82035903-82036928	0	-	82035903	82035903	8553170	5	160,258,100,43,70,	0,287,640,817,955,
#Deleted in new
chr17	82035967	82037677	chr17:82035967-82037677	0	-	82036057	82037677	789624	8	96,162,65,100,43,155,98,47,	0,179,416,576,753,891,1482,1663,
#Deleted in new
chr17	82035995	82037702	chr17:82035995-82037702	0	-	82035995	82035995	8553170	7	68,118,65,100,43,230,253,	0,195,388,548,725,863,1454,
#Deleted in new
chr17	82036017	82037687	chr17:82036017-82037687	0	-	82036017	82037682	789624	8	46,118,65,100,43,155,92,57,	0,173,366,526,703,841,1432,1613,
#Deleted in new
chr17	82036020	82036927	chr17:82036020-82036927	0	-	82036298	82036927	789624	6	43,132,65,100,43,69,	0,170,363,523,700,838,
#Deleted in new
chr17	82036215	82037342	chr17:82036215-82037342	0	-	82036215	82036215	8553170	3	93,350,484,	0,198,643,
#Deleted in new
chr17	82036283	82036581	chr17:82036283-82036581	0	-	82036283	82036283	8553170	3	25,35,38,	0,130,260,
#Deleted in new
chr17	82036292	82037680	chr17:82036292-82037680	0	-	82036292	82037680	789624	6	16,65,100,43,155,50,	0,91,251,428,566,1338,
#Deleted in new
chr17	82036392	82037689	chr17:82036392-82037689	0	-	82036392	82037682	789624	5	56,100,43,155,76,	0,151,328,466,1221,
#Deleted in new
chr17	82036520	82037309	chr17:82036520-82037309	0	-	82036520	82036520	8553170	3	123,43,451,	0,200,338,
#Deleted in new
chr17	82036567	82037230	chr17:82036567-82037230	0	-	82036567	82036567	8553170	4	76,43,23,142,	0,153,291,521,
#Deleted in new
chr17	82036632	82037709	chr17:82036632-82037709	0	-	82036632	82036632	8553170	4	11,293,92,79,	0,88,817,998,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	82047901	82051774	chr17:82047901-82051774	3	-	82048725	82051766	789624	8	906,86,166,89,154,103,49,275,	0,1129,1775,2016,2500,2760,3392,3598,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	82047901	82050514	chr17:82047901-82050514	0	-	82047901	82047901	8553170	4	906,86,166,597,	0,1129,1775,2016,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	82047901	82051831	chr17:82047901-82051831	0	-	82047901	82047901	8553170	4	1215,879,681,332,	0,1775,2760,3598,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	82047901	82050787	chr17:82047901-82050787	0	-	82047901	82047901	8553170	1	2886,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	82047905	82051562	chr17:82047905-82051562	0	-	82047905	82047905	8553170	6	902,86,879,103,49,63,	0,1125,1771,2756,3388,3594,
#Deleted in new
chr17	82048444	82051335	chr17:82048444-82051335	0	-	82048444	82048444	8553170	6	363,86,330,154,103,42,	0,586,1232,1957,2217,2849,
#Deleted in new
chr17	82048552	82051434	chr17:82048552-82051434	1	-	82048725	82050702	789624	7	255,86,166,89,154,103,141,	0,478,1124,1365,1849,2109,2741,
#Deleted in new
chr17	82048748	82050990	chr17:82048748-82050990	0	-	82048748	82048748	8553170	7	59,86,166,89,154,103,64,	0,282,928,1169,1653,1913,2178,
#Deleted in new
chr17	82049792	82050759	chr17:82049792-82050759	0	-	82049792	82049792	8553170	3	50,154,98,	0,609,869,
#Deleted in new
chr17	82049906	82051586	chr17:82049906-82051586	0	-	82049906	82049906	8553170	3	858,49,87,	0,1387,1593,
#Deleted in new
chr17	82050414	82051573	chr17:82050414-82051573	0	-	82050414	82050702	789624	4	141,103,331,74,	0,247,597,1085,
#Deleted in new
chr17	82050454	82051407	chr17:82050454-82051407	0	-	82050454	82050454	8553170	2	310,114,	0,839,
#Deleted in new
chr17	82050690	82051837	chr17:82050690-82051837	0	+	82050690	82050690	8553170	2	453,103,	0,1044,
#Deleted in new
chr17	82050947	82054651	chr17:82050947-82054651	0	+	82053288	82054651	789624	4	144,93,182,142,	0,2326,2920,3562,
#Deleted in new
chr17	82051174	82054968	chr17:82051174-82054968	0	+	82053288	82054968	789624	5	350,93,182,301,71,	0,2099,2693,3335,3723,
#Deleted in new
chr17	82051476	82054741	chr17:82051476-82054741	0	+	82053288	82054741	789624	4	48,93,182,244,	0,1797,2391,3021,
#Deleted in new
chr17	82051499	82054586	chr17:82051499-82054586	0	+	82052306	82054586	789624	5	25,204,93,182,77,	0,756,1774,2368,3010,
#Deleted in new
chr17	82051864	82057470	chr17:82051864-82057470	1	+	82051931	82057127	0	13	100,93,182,301,78,61,86,95,106,81,138,135,418,	0,1409,2003,2645,3033,3297,3875,4136,4421,4605,4764,4975,5188,
#Deleted in new
chr17	82051874	82057470	chr17:82051874-82057470	1	+	82053288	82057127	789624	14	90,85,93,182,301,78,61,86,95,106,81,138,135,418,	0,500,1399,1993,2635,3023,3287,3865,4126,4411,4595,4754,4965,5178,
#Deleted in new
chr17	82051892	82057440	chr17:82051892-82057440	1	+	82051931	82057127	789624	13	72,93,182,313,78,58,86,95,106,81,138,135,388,	0,1381,1975,2605,3005,3272,3847,4108,4393,4577,4736,4947,5160,
#Deleted in new
chr17	82051896	82054542	chr17:82051896-82054542	0	+	82053288	82054542	789624	5	68,82,93,182,45,	0,481,1377,1971,2601,
#Deleted in new
chr17	82051896	82054757	chr17:82051896-82054757	0	+	82051931	82054757	789624	5	68,204,93,182,248,	0,359,1377,1971,2613,
#Deleted in new
chr17	82051896	82054559	chr17:82051896-82054559	0	+	82051931	82054559	789624	5	68,201,93,182,50,	0,362,1377,1971,2613,
#Deleted in new
chr17	82051896	82057470	chr17:82051896-82057470	1	+	82051931	82057127	789624	13	68,93,182,301,78,58,86,95,106,81,138,135,418,	0,1377,1971,2613,3001,3268,3843,4104,4389,4573,4732,4943,5156,
#Deleted in new
chr17	82051897	82053785	chr17:82051897-82053785	0	+	82051897	82051897	8553170	2	67,512,	0,1376,
#Deleted in new
chr17	82051900	82056019	chr17:82051900-82056019	0	+	82051931	82053335	789624	8	64,133,182,301,78,61,86,19,	0,1333,1967,2609,2997,3261,3839,4100,
#Deleted in new
chr17	82051900	82054668	chr17:82051900-82054668	0	+	82053288	82054668	789624	5	64,82,93,182,159,	0,477,1373,1967,2609,
#Deleted in new
chr17	82051901	82054682	chr17:82051901-82054682	0	+	82051931	82053904	789624	4	63,113,182,185,	0,1352,1966,2596,
#Deleted in new
chr17	82051907	82054542	chr17:82051907-82054542	0	+	82051931	82053335	789624	5	57,187,93,182,33,	0,348,1366,1960,2602,
#Deleted in new
chr17	82051908	82057470	chr17:82051908-82057470	1	+	82051931	82057127	0	13	56,93,182,313,78,61,86,95,106,81,138,135,418,	0,1365,1959,2589,2989,3253,3831,4092,4377,4561,4720,4931,5144,
#Deleted in new
chr17	82051924	82053225	chr17:82051924-82053225	0	+	82051924	82051924	8553170	3	40,85,410,	0,450,891,
#Deleted in new
chr17	82051926	82054738	chr17:82051926-82054738	0	+	82051931	82053335	789624	4	38,133,182,241,	0,1307,1941,2571,
#Deleted in new
chr17	82051928	82057463	chr17:82051928-82057463	0	+	82051931	82053335	789624	13	36,133,182,313,78,61,86,95,106,81,138,135,411,	0,1305,1939,2569,2969,3233,3811,4072,4357,4541,4700,4911,5124,
#Deleted in new
chr17	82051957	82057470	chr17:82051957-82057470	3	+	82052306	82057127	0	13	502,93,182,301,78,61,86,95,106,81,138,135,418,	0,1316,1910,2552,2940,3204,3782,4043,4328,4512,4671,4882,5095,
#Deleted in new
chr17	82052232	82054569	chr17:82052232-82054569	0	+	82052306	82054569	789624	4	227,93,182,72,	0,1041,1635,2265,
#Deleted in new
chr17	82052241	82057424	chr17:82052241-82057424	1	+	82052306	82057127	789624	13	218,93,182,301,78,58,86,95,106,81,138,135,372,	0,1032,1626,2268,2656,2923,3498,3759,4044,4228,4387,4598,4811,
#Deleted in new
chr17	82052569	82057470	chr17:82052569-82057470	0	+	82052569	82052569	8553170	4	797,943,1494,842,	0,1298,2328,4059,
#Deleted in new
chr17	82054951	82057117	chr17:82054951-82057117	0	+	82054951	82054951	8553170	8	24,61,86,95,265,144,135,65,	0,210,788,1049,1334,1677,1888,2101,
#Deleted in new
chr17	82056523	82057470	chr17:82056523-82057470	0	+	82056523	82057127	789624	3	27,138,418,	0,105,529,
#Deleted in new
chr17	82056523	82057470	chr17:82056523-82057470	0	+	82056523	82056523	8553170	3	27,138,631,	0,105,316,
#Deleted in new
chr17	82057505	82065639	chr17:82057505-82065639	3	-	82058114	82065059	789624	14	749,76,38,146,83,97,145,104,83,113,51,109,247,27,	0,835,1275,2442,3195,3359,3703,4112,4395,5355,5962,6620,7317,8107,
#Deleted in new
chr17	82057871	82065545	chr17:82057871-82065545	1	-	82058114	82065059	789624	13	383,76,38,146,83,97,145,104,83,113,51,109,723,	0,469,909,2076,2829,2993,3337,3746,4029,4989,5596,6254,6951,
#Deleted in new
chr17	82057879	82060094	chr17:82057879-82060094	0	-	82057894	82060094	789624	4	212,76,38,147,	0,461,901,2068,
#Deleted in new
chr17	82057879	82063477	chr17:82057879-82063477	0	-	82057879	82057879	8553170	4	375,3381,83,617,	0,461,4021,4981,
#Deleted in new
chr17	82057881	82062973	chr17:82057881-82062973	0	-	82058235	82062973	789624	10	373,68,38,146,83,97,145,104,83,113,	0,459,899,2066,2819,2983,3327,3736,4019,4979,
#Deleted in new
chr17	82057904	82060140	chr17:82057904-82060140	0	-	82057904	82057904	8553170	4	350,76,38,193,	0,436,876,2043,
#Deleted in new
chr17	82057913	82060775	chr17:82057913-82060775	0	-	82058235	82060775	789624	4	341,478,146,75,	0,427,2034,2787,
#Deleted in new
chr17	82058015	82059141	chr17:82058015-82059141	0	-	82058015	82058015	8553170	3	239,76,361,	0,325,765,
#Deleted in new
chr17	82058340	82061695	chr17:82058340-82061695	0	-	82059983	82061695	789624	7	76,38,146,80,101,145,139,	0,440,1607,2360,2520,2868,3216,
#Deleted in new
chr17	82058486	82060303	chr17:82058486-82060303	0	-	82058486	82058486	8553170	2	332,356,	0,1461,
#Deleted in new
chr17	82060157	82060951	chr17:82060157-82060951	0	-	82060157	82060157	8553170	2	623,91,	0,703,
#Deleted in new
chr17	82060700	82064255	chr17:82060700-82064255	0	-	82060700	82060700	8553170	7	80,101,513,83,113,51,130,	0,160,508,1200,2160,2767,3425,
#Deleted in new
chr17	82060876	82065887	chr17:82060876-82065887	0	-	82060876	82065059	789624	9	85,145,104,83,113,51,109,247,275,	0,332,741,1024,1984,2591,3249,3946,4736,
#Deleted in new
chr17	82061208	82065783	chr17:82061208-82065783	0	-	82061208	82065059	789624	8	145,165,83,113,51,109,247,171,	0,348,692,1652,2259,2917,3614,4404,
#Deleted in new
chr17	82061257	82065797	chr17:82061257-82065797	0	-	82061257	82065059	789624	7	96,104,83,113,109,247,185,	0,360,643,1603,2868,3565,4355,
#Deleted in new
chr17	82062881	82065794	chr17:82062881-82065794	0	-	82062881	82065059	789624	5	92,51,76,247,182,	0,586,1244,1941,2731,
#Partially deleted in new
chr17	82078332	82098332	chr17:82078332-82098332	3	-	82079142	82096445	0	43	948,252,99,221,231,189,243,152,92,152,202,224,123,120,179,151,204,155,122,165,390,305,204,180,177,81,192,173,116,204,135,95,190,188,463,135,116,123,201,174,153,134,212,	0,1024,1807,2037,2359,2831,3268,3676,3990,4194,4581,4869,5184,5439,5642,5901,6180,6466,6702,6905,7149,7921,8717,8992,9352,9621,9783,10057,10428,10636,10917,11299,12042,12549,12889,14122,14364,14564,14886,15265,16987,17986,19788,
#Partially deleted in new
chr17	82078339	82098187	chr17:82078339-82098187	1	-	82079142	82096445	789624	43	941,252,99,221,231,189,243,152,92,152,202,224,123,120,179,151,204,155,122,165,390,299,204,180,177,81,192,173,116,204,135,95,190,188,463,135,116,123,201,174,153,134,67,	0,1017,1800,2030,2352,2824,3261,3669,3983,4187,4574,4862,5177,5432,5635,5894,6173,6459,6695,6898,7142,7920,8710,8985,9345,9614,9776,10050,10421,10629,10910,11292,12035,12542,12882,14115,14357,14557,14879,15258,16980,17979,19781,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82078996	82079929	chr17:82078996-82079929	0	-	82078996	82078996	8553170	2	284,573,	0,360,
#Partially deleted in new
chr17	82079006	82080695	chr17:82079006-82080695	0	-	82079006	82079006	8553170	4	274,252,99,326,	0,350,1133,1363,
#Partially deleted in new
chr17	82079167	82080742	chr17:82079167-82080742	0	-	82080219	82080742	789624	5	113,252,99,166,51,	0,189,972,1202,1524,
#Deleted in new
chr17	82079221	82079378	chr17:82079221-82079378	0	-	82079239	82079378	789624	2	78,22,	0,135,
#Deleted in new
chr17	82085157	82085660	chr17:82085157-82085660	0	-	82085157	82085157	8553170	2	245,179,	0,324,
#Partially deleted in new
chr17	82093600	82098294	chr17:82093600-82098294	0	-	82093600	82096445	789624	4	171,153,129,174,	0,1719,2718,4520,
#Partially deleted in new
chr17	82094103	82095376	chr17:82094103-82095376	0	-	82094103	82094103	8553170	2	84,57,	0,1216,
#Deleted in new
chr17	82096389	82097527	chr17:82096389-82097527	0	-	82096389	82096445	789624	2	63,37,	0,1101,
#Deleted in new
chr17	82096402	82096841	chr17:82096402-82096841	0	-	82096402	82096402	8553170	2	45,55,	0,384,
#Deleted in new
chr17	82096414	82097324	chr17:82096414-82097324	0	-	82096414	82096445	789624	2	33,67,	0,843,
#Deleted in new
chr17	82096802	82098146	chr17:82096802-82098146	0	-	82096802	82096802	8553170	2	74,26,	0,1318,
#Partially deleted in new
chr17	82101459	82106375	chr17:82101459-82106375	0	-	82101459	82101459	8553170	2	407,106,	0,4810,
#Partially deleted in new
chr17	82101469	82212813	chr17:82101469-82212813	1	-	82101681	82201944	789624	18	397,217,105,3,201,158,153,223,132,163,159,201,75,158,102,109,415,29,	0,26222,27023,44381,56278,61730,70231,71168,77004,77557,82304,86749,92286,92512,93793,96844,100068,111315,
#Partially deleted in new
chr17	82101469	82212813	chr17:82101469-82212813	1	-	82101681	82201944	789624	17	397,217,108,201,158,153,223,132,163,159,201,75,158,102,109,415,29,	0,26222,27023,56278,61730,70231,71168,77004,77557,82304,86749,92286,92512,93793,96844,100068,111315,
#Deleted in new
chr17	82101469	82101850	chr17:82101469-82101850	0	-	82101521	82101850	789624	2	89,99,	0,282,
#Partially deleted in new
chr17	82101689	82128556	chr17:82101689-82128556	0	-	82101730	82128556	789624	4	177,220,217,64,	0,5712,26002,26803,
#Partially deleted in new
chr17	82101751	82127818	chr17:82101751-82127818	0	-	82108916	82127818	789624	3	115,187,127,	0,7016,25940,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82104794	82106587	chr17:82104794-82106587	0	-	82104794	82104794	8553170	2	319,318,	0,1475,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	82111985	82152299	chr17:82111985-82152299	1	-	82113343	82151752	789624	5	1780,217,105,122,740,	0,15706,16507,22087,39574,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	82111985	82171732	chr17:82111985-82171732	0	-	82113343	82171732	789624	8	1780,217,105,122,214,201,158,32,	0,15706,16507,22087,39574,45762,51214,59715,
#Partially deleted in new
chr17	82127704	82134343	chr17:82127704-82134343	0	-	82127704	82127704	8553170	3	204,105,271,	0,788,6368,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82135111	82151606	chr17:82135111-82151606	0	-	82135111	82135111	8553170	2	283,47,	0,16448,
#Deleted in new
chr17	82153429	82154815	chr17:82153429-82154815	3	+	82153429	82153429	8553170	2	477,78,	0,1308,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	82153609	82185172	chr17:82153609-82185172	0	-	82153609	82153609	8553170	7	4339,158,153,223,132,159,215,	0,9590,18091,19028,24864,30164,31348,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82155916	82156940	chr17:82155916-82156940	0	-	82155916	82155916	8553170	2	367,204,	0,820,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr17	82157447	82212813	chr17:82157447-82212813	3	-	82157732	82201944	789624	15	501,158,153,223,132,163,159,201,75,158,102,109,415,318,29,	0,5752,14253,15190,21026,21579,26326,30771,36308,36534,37815,40866,44090,50283,55337,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82160055	82160452	chr17:82160055-82160452	3	+	82160055	82160055	8553170	2	283,62,	0,335,
#Partially deleted in new
chr17	82188223	82194255	chr17:82188223-82194255	0	-	82188223	82188223	8553170	2	196,500,	0,5532,
#Partially deleted in new
chr17	82188224	82198428	chr17:82188224-82198428	0	-	82188224	82188224	8553170	4	195,384,102,115,	0,5531,7038,10089,
#Partially deleted in new
chr17	82188349	82198422	chr17:82188349-82198422	0	-	82195344	82198422	789624	5	70,75,158,102,86,	0,5406,5632,6913,9987,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82207562	82212830	chr17:82207562-82212830	0	-	82207562	82207562	8553170	2	486,51,	0,5217,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82214226	82217352	chr17:82214226-82217352	3	+	82214226	82214226	8553170	2	1371,997,	0,2129,
#Partially deleted in new
chr17	82228396	82237644	chr17:82228396-82237644	0	+	82236008	82237644	789624	4	133,249,144,507,	0,7586,8332,8741,
#Partially deleted in new
chr17	82228405	82239498	chr17:82228405-82239498	3	+	82236008	82238976	789624	5	140,249,144,756,797,	0,7577,8323,8732,10296,
#Partially deleted in new
chr17	82228420	82237427	chr17:82228420-82237427	0	+	82236008	82237427	789624	4	125,249,144,290,	0,7562,8308,8717,
#Partially deleted in new
chr17	82228447	82236457	chr17:82228447-82236457	0	+	82228447	82228447	8553170	2	82,475,	0,7535,
#Partially deleted in new
chr17	82229031	82239479	chr17:82229031-82239479	1	+	82236008	82238976	789624	5	75,249,144,756,778,	0,6951,7697,8106,9670,
#Deleted in new
chr17	82229044	82231926	chr17:82229044-82231926	0	+	82229044	82229044	8553170	1	2882,	0,
#Partially deleted in new
chr17	82229054	82237282	chr17:82229054-82237282	0	+	82229054	82229054	8553170	4	52,249,116,145,	0,6928,7674,8083,
#Partially deleted in new
chr17	82229057	82237705	chr17:82229057-82237705	0	+	82236008	82237705	789624	3	49,249,568,	0,6925,8080,
#Partially deleted in new
chr17	82229059	82237320	chr17:82229059-82237320	0	+	82236008	82237320	789624	5	47,68,103,144,183,	0,6923,7069,7669,8078,
#Partially deleted in new
chr17	82229061	82236895	chr17:82229061-82236895	0	+	82229061	82229061	8553170	2	45,913,	0,6921,
#Partially deleted in new
chr17	82229067	82237303	chr17:82229067-82237303	0	+	82229067	82229067	8553170	3	39,249,575,	0,6915,7661,
#Partially deleted in new
chr17	82229092	82239481	chr17:82229092-82239481	0	+	82236008	82239481	789624	3	14,146,119,	0,6890,10270,
#Partially deleted in new
chr17	82232231	82239498	chr17:82232231-82239498	1	+	82236008	82238976	789624	5	128,249,144,756,797,	0,3751,4497,4906,6470,
#Partially deleted in new
chr17	82232231	82237475	chr17:82232231-82237475	0	+	82236008	82237475	789624	4	128,249,144,338,	0,3751,4497,4906,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	82233686	82240086	chr17:82233686-82240086	1	+	82236008	82238976	789624	4	2545,144,756,1385,	0,3042,3451,5015,
#Deleted in new
chr17	82234898	82237177	chr17:82234898-82237177	0	+	82236008	82237177	789624	4	102,249,144,40,	0,1084,1830,2239,
#Deleted in new
chr17	82234898	82239498	chr17:82234898-82239498	1	+	82236008	82238976	789624	5	102,249,144,756,797,	0,1084,1830,2239,3803,
#Deleted in new
chr17	82235052	82237439	chr17:82235052-82237439	0	+	82236008	82237439	789624	4	177,249,144,302,	0,930,1676,2085,
#Deleted in new
chr17	82235773	82237261	chr17:82235773-82237261	0	+	82236008	82237261	789624	4	69,249,144,124,	0,209,955,1364,
#Deleted in new
chr17	82235773	82239498	chr17:82235773-82239498	1	+	82236008	82238976	789624	5	69,249,144,756,797,	0,209,955,1364,2928,
#Deleted in new
chr17	82236473	82237416	chr17:82236473-82237416	0	+	82236473	82236473	8553170	2	399,279,	0,664,
#Deleted in new
chr17	82236667	82236728	chr17:82236667-82236728	3	+	82236667	82236667	5263520	1	61,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82237169	82261129	chr17:82237169-82261129	0	+	82237169	82261095	789624	2	724,231,	0,23729,
#Deleted in new
chr17	82239022	82248980	chr17:82239022-82248980	0	-	82239975	82248980	789624	3	146,149,106,	0,891,9852,
#Partially deleted in new
chr17	82239726	82273428	chr17:82239726-82273428	1	-	82239975	82273381	789624	9	336,140,172,149,171,229,149,111,123,	0,9148,9704,11652,12707,13289,15702,25959,33579,
#Partially deleted in new
chr17	82242666	82273731	chr17:82242666-82273731	3	-	82244780	82273381	0	9	2165,140,172,149,171,229,149,111,426,	0,6208,6764,8712,9767,10349,12762,23019,30639,
#Partially deleted in new
chr17	82242672	82273369	chr17:82242672-82273369	0	-	82242672	82242672	8553170	8	2159,3039,172,149,171,229,111,64,	0,3303,6758,8706,9761,10343,23013,30633,
#Partially deleted in new
chr17	82244300	82254679	chr17:82244300-82254679	0	-	82244300	82244300	8553170	7	531,64,140,172,149,171,1664,	0,1675,4574,5130,7078,8133,8715,
#Partially deleted in new
chr17	82244361	82273697	chr17:82244361-82273697	1	-	82246006	82273381	0	10	470,64,140,172,149,171,229,149,111,392,	0,1614,4513,5069,7017,8072,8654,11067,21324,28944,
#Deleted in new
chr17	82244361	82246591	chr17:82244361-82246591	0	-	82244361	82244361	8553170	3	470,64,394,	0,1614,1836,
#Deleted in new
chr17	82244393	82249496	chr17:82244393-82249496	0	-	82244393	82244393	8553170	3	438,64,622,	0,1582,4481,
#Deleted in new
chr17	82244490	82249164	chr17:82244490-82249164	0	-	82244490	82244490	8553170	2	341,290,	0,4384,
#Deleted in new
chr17	82244644	82251414	chr17:82244644-82251414	0	-	82250154	82251414	789624	6	187,64,140,172,482,36,	0,1331,4230,4786,5053,6734,
#Partially deleted in new
chr17	82244679	82255516	chr17:82244679-82255516	0	-	82252483	82255516	789624	8	152,64,140,172,149,94,229,88,	0,1296,4195,4751,6699,7754,8336,10749,
#Deleted in new
chr17	82244721	82245113	chr17:82244721-82245113	0	-	82244721	82244721	8553170	2	110,185,	0,207,
#Deleted in new
chr17	82244769	82245591	chr17:82244769-82245591	3	+	82244769	82244769	8553170	2	209,420,	0,402,
#Partially deleted in new
chr17	82246017	82273431	chr17:82246017-82273431	0	-	82252559	82273381	789624	8	22,140,172,149,171,149,111,126,	0,2857,3413,5361,6416,9411,19668,27288,
#Deleted in new
chr17	82246317	82249835	chr17:82246317-82249835	0	-	82246317	82246317	8553170	4	116,140,172,138,	0,2557,3113,3380,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82249066	82251827	chr17:82249066-82251827	7	+	82249066	82249066	16724991	2	2166,590,	0,2171,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	82249066	82251844	chr17:82249066-82251844	0	+	82249066	82249066	8553170	1	2778,	0,
#Partially deleted in new
chr17	82249238	82252527	chr17:82249238-82252527	0	-	82249238	82249238	8553170	3	364,149,94,	0,2140,3195,
#Partially deleted in new
chr17	82249488	82273124	chr17:82249488-82273124	0	-	82249488	82249488	8553170	7	114,149,171,229,149,111,34,	0,1890,2945,3527,5940,16197,23602,
#Partially deleted in new
chr17	82249577	82255546	chr17:82249577-82255546	0	-	82249577	82249577	8553170	5	602,149,171,229,118,	0,1801,2856,3438,5851,
#Partially deleted in new
chr17	82252496	82273431	chr17:82252496-82273431	0	-	82252496	82273381	789624	4	108,229,149,126,	0,519,2932,20809,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	82253215	82273457	chr17:82253215-82273457	0	-	82266838	82273381	789624	5	29,149,111,170,152,	0,2213,12470,13509,20090,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	82253219	82273171	chr17:82253219-82273171	0	-	82253219	82253219	8553170	5	25,149,111,247,35,	0,2209,12466,18850,19917,
#Partially deleted in new
chr17	82255129	82273438	chr17:82255129-82273438	0	-	82255129	82255129	8553170	3	448,111,133,	0,10556,18176,
#Partially deleted in new
chr17	82255163	82273466	chr17:82255163-82273466	0	-	82255163	82255163	8553170	4	165,149,111,161,	0,265,10522,18142,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	82255186	82266800	chr17:82255186-82266800	0	-	82255186	82255186	8553170	3	391,111,76,	0,10499,11538,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82265299	82273406	chr17:82265299-82273406	0	-	82265299	82265299	8553170	2	497,101,	0,8006,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	82266707	82273251	chr17:82266707-82273251	0	-	82266707	82266707	8553170	3	187,247,115,	0,5362,6429,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82290045	82292814	chr17:82290045-82292814	3	-	82290045	82290045	789624	2	1518,292,	0,2477,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	82293715	82294910	chr17:82293715-82294910	3	+	82293715	82293715	8553170	1	1195,	0,
#Deleted in new
chr17	82314867	82317577	chr17:82314867-82317577	1	-	82316140	82317495	789624	3	1542,315,164,	0,1799,2546,
#Deleted in new
chr17	82314869	82317602	chr17:82314869-82317602	3	-	82315320	82317495	789624	4	562,215,315,189,	0,1325,1797,2544,
#Deleted in new
chr17	82314873	82317552	chr17:82314873-82317552	1	-	82315320	82316763	789624	3	558,215,886,	0,1321,1793,
#Deleted in new
chr17	82315974	82317558	chr17:82315974-82317558	1	-	82316140	82316763	789624	3	435,345,145,	0,692,1439,
#Deleted in new
chr17	82316131	82317553	chr17:82316131-82317553	0	-	82316131	82316131	8553170	2	850,140,	0,1282,
#Deleted in new
chr17	82316219	82317550	chr17:82316219-82317550	0	-	82316885	82317495	789624	3	190,245,137,	0,447,1194,
#Deleted in new
chr17	82316384	82317579	chr17:82316384-82317579	0	-	82316384	82317495	789624	3	25,373,166,	0,282,1029,
#Partially deleted in new
chr17	82321023	82333998	chr17:82321023-82333998	3	-	82322160	82327240	789624	5	1347,134,309,146,299,	0,1854,3558,6123,12676,
#Partially deleted in new
chr17	82321886	82333762	chr17:82321886-82333762	1	-	82322351	82327240	789624	5	484,28,309,146,63,	0,991,2695,5260,11813,
#Partially deleted in new
chr17	82322114	82333748	chr17:82322114-82333748	0	-	82324745	82327240	789624	5	256,134,202,146,49,	0,763,2467,5032,11585,
#Partially deleted in new
chr17	82322878	82334074	chr17:82322878-82334074	0	-	82322878	82327240	789624	4	133,309,146,253,	0,1703,4268,10943,
#Partially deleted in new
chr17	82322964	82333769	chr17:82322964-82333769	0	-	82322964	82327240	789624	5	47,60,309,146,75,	0,292,1617,4182,10730,
#Partially deleted in new
chr17	82323279	82333763	chr17:82323279-82333763	0	-	82323279	82327240	789624	4	37,309,146,64,	0,1302,3867,10420,
#Partially deleted in new
chr17	82324728	82333766	chr17:82324728-82333766	0	-	82324728	82327240	789624	4	162,146,208,67,	0,2418,4530,8971,
#Partially deleted in new
chr17	82324852	82328506	chr17:82324852-82328506	0	-	82324852	82327240	789624	3	38,146,377,	0,2294,3277,
#Partially deleted in new
chr17	82359246	82363776	chr17:82359246-82363776	3	+	82362150	82362645	789624	2	39,1897,	0,2633,
#Partially deleted in new
chr17	82362348	82363196	chr17:82362348-82363196	3	-	82362348	82362348	8553170	1	848,	0,
#Deleted in new
chr17	82374229	82375586	chr17:82374229-82375586	3	+	82374324	82375494	789624	1	1357,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82381109	82382690	chr17:82381109-82382690	3	-	82381109	82381109	8553170	2	233,127,	0,1454,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr17	82389222	82418637	chr17:82389222-82418637	3	-	82392397	82418485	789624	9	3312,124,154,57,65,43,76,230,226,	0,8973,14714,16101,17195,20145,22232,26175,29189,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	82390115	82393911	chr17:82390115-82393911	0	-	82390115	82390115	8553170	1	3796,	0,
#Deleted in new
chr17	82391666	82392105	chr17:82391666-82392105	0	-	82391666	82391666	8553170	2	176,164,	0,275,
#Partially deleted in new
chr17	82392009	82418576	chr17:82392009-82418576	1	-	82394370	82418485	789624	10	525,213,124,154,57,65,43,76,230,165,	0,2321,6186,11927,13314,14408,17358,19445,23388,26402,
#Deleted in new
chr17	82392214	82393217	chr17:82392214-82393217	0	-	82392214	82392214	8553170	2	320,572,	0,431,
#Partially deleted in new
chr17	82392225	82415516	chr17:82392225-82415516	0	-	82392397	82415516	789624	7	309,124,154,57,65,76,111,	0,5970,11711,13098,14192,19229,23180,
#Partially deleted in new
chr17	82392440	82418637	chr17:82392440-82418637	0	-	82409401	82418485	789624	10	94,213,124,154,57,65,43,76,222,226,	0,1890,5755,11496,12883,13977,16927,19014,22965,25971,
#Partially deleted in new
chr17	82392453	82411689	chr17:82392453-82411689	0	-	82392453	82392453	8553170	7	81,124,154,57,65,43,235,	0,5742,11483,12870,13964,16914,19001,
#Partially deleted in new
chr17	82396544	82406432	chr17:82396544-82406432	0	-	82396544	82406432	789624	5	307,124,154,57,15,	0,1651,7392,8779,9873,
#Partially deleted in new
chr17	82396596	82403967	chr17:82396596-82403967	0	-	82396695	82403967	789624	3	230,124,31,	0,1599,7340,
#Partially deleted in new
chr17	82398195	82418588	chr17:82398195-82418588	0	-	82398195	82398241	789624	8	124,94,57,65,43,76,230,183,	0,5699,7128,8222,11172,13259,17202,20210,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	82400702	82401382	chr17:82400702-82401382	3	-	82400702	82400702	8553170	1	680,	0,
#Partially deleted in new
chr17	82406421	82418601	chr17:82406421-82418601	0	-	82406421	82406421	8553170	5	61,43,76,222,196,	0,2946,5033,8984,11984,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	82417225	82417321	chr17:82417225-82417321	3	+	82417225	82417225	8553170	1	96,	0,
#Partially deleted in new
chr17	82418317	82442645	chr17:82418317-82442645	3	+	82419799	82442592	789624	12	423,135,110,88,165,184,72,196,83,270,90,469,	0,1431,6076,10240,15340,17371,18349,18850,21313,22679,23482,23859,
#Partially deleted in new
chr17	82418660	82442645	chr17:82418660-82442645	1	+	82419799	82442384	789624	13	80,135,110,88,165,184,72,196,83,79,102,90,469,	0,1088,5733,9897,14997,17028,18006,18507,20970,22336,22504,23139,23516,
#Partially deleted in new
chr17	82418660	82442598	chr17:82418660-82442598	0	+	82418660	82418660	8553170	12	80,135,110,88,165,184,697,83,79,102,90,422,	0,1088,5733,9897,14997,17028,18006,20970,22336,22504,23139,23516,
#Partially deleted in new
chr17	82418672	82435870	chr17:82418672-82435870	0	+	82428639	82435870	789624	5	68,135,88,165,182,	0,1076,9885,14985,17016,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82418672	82420422	chr17:82418672-82420422	0	+	82418672	82418672	8553170	2	68,674,	0,1076,
#Partially deleted in new
chr17	82418696	82442641	chr17:82418696-82442641	1	+	82419799	82442551	789624	13	44,135,110,88,165,184,72,196,83,74,114,90,465,	0,1052,5697,9861,14961,16992,17970,18471,20934,22300,22456,23103,23480,
#Partially deleted in new
chr17	82418712	82435740	chr17:82418712-82435740	0	+	82419799	82424475	789624	6	28,135,85,88,165,52,	0,1036,5706,9845,14945,16976,
#Partially deleted in new
chr17	82419799	82442384	chr17:82419799-82442384	1	+	82419799	82442384	789624	12	84,110,88,165,184,72,196,83,79,102,90,208,	0,4594,8758,13858,15889,16867,17368,19831,21197,21365,22000,22377,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	82423309	82433751	chr17:82423309-82433751	0	+	82424450	82433751	789624	4	290,110,88,94,	0,1084,5248,10348,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	82425497	82427310	chr17:82425497-82427310	3	+	82425497	82425497	8553170	1	1813,	0,
#Partially deleted in new
chr17	82433799	82442550	chr17:82433799-82442550	0	+	82433799	82440240	789624	9	23,184,72,196,704,79,102,90,374,	0,1889,2867,3368,5831,7197,7365,8000,8377,
#Partially deleted in new
chr17	82436728	82442592	chr17:82436728-82442592	0	+	82436728	82442384	789624	6	10,196,83,79,69,416,	0,439,2902,4268,5092,5448,
#Partially deleted in new
chr17	82437126	82440532	chr17:82437126-82440532	0	+	82437126	82437126	8553170	2	237,902,	0,2504,
#Partially deleted in new
chr17	82437214	82442394	chr17:82437214-82442394	0	+	82437214	82440507	789624	7	149,83,141,79,102,90,218,	0,2416,3258,3782,3950,4585,4962,
#Deleted in new
chr17	82439999	82441828	chr17:82439999-82441828	0	+	82439999	82440240	789624	5	335,141,79,102,29,	0,473,997,1165,1800,
#Deleted in new
chr17	82440113	82442352	chr17:82440113-82442352	0	+	82440113	82440113	8553170	5	500,74,102,90,176,	0,883,1051,1686,2063,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	82442588	82450770	chr17:82442588-82450770	1	-	82444003	82444517	789624	4	1536,145,97,71,	0,1858,3275,8111,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr17	82442642	82450829	chr17:82442642-82450829	3	-	82444003	82449254	789624	7	1482,145,97,74,42,123,130,	0,1804,3221,3980,4937,6527,8057,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82442642	82445186	chr17:82442642-82445186	0	-	82442642	82442642	8553170	2	1482,740,	0,1804,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	82442643	82450829	chr17:82442643-82450829	1	-	82444003	82449254	789624	6	1481,145,97,74,123,130,	0,1803,3220,3979,6526,8056,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	82442643	82450709	chr17:82442643-82450709	1	-	82444003	82449254	789624	8	1481,145,97,74,42,123,50,230,	0,1803,3220,3979,4936,6526,6787,7836,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	82442643	82448053	chr17:82442643-82448053	0	-	82442643	82442643	8553170	4	1481,145,97,1431,	0,1803,3220,3979,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	82442643	82450776	chr17:82442643-82450776	0	-	82444572	82449254	789624	6	1481,145,97,42,123,77,	0,1803,3220,4936,6526,8056,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	82442643	82450109	chr17:82442643-82450109	0	-	82442643	82442643	8553170	5	1481,145,97,74,2530,	0,1803,3220,3979,4936,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82442899	82444528	chr17:82442899-82444528	0	-	82443529	82444528	789624	2	727,82,	0,1547,
#Deleted in new
chr17	82443448	82445930	chr17:82443448-82445930	0	-	82443450	82445930	789624	3	57,145,67,	0,998,2415,
#Partially deleted in new
chr17	82443455	82450717	chr17:82443455-82450717	1	-	82443692	82449254	789624	7	367,145,97,74,42,123,18,	0,991,2408,3167,4124,5714,7244,
#Partially deleted in new
chr17	82443531	82449320	chr17:82443531-82449320	0	-	82446692	82449254	789624	6	593,145,97,74,67,151,	0,915,2332,3091,4048,5638,
#Partially deleted in new
chr17	82443659	82449605	chr17:82443659-82449605	1	-	82444003	82449254	789624	6	465,145,97,74,123,175,	0,787,2204,2963,5510,5771,
#Partially deleted in new
chr17	82443822	82450770	chr17:82443822-82450770	1	-	82444003	82449254	789624	7	302,145,97,74,42,123,291,	0,624,2041,2800,3757,5347,6657,
#Partially deleted in new
chr17	82443848	82449726	chr17:82443848-82449726	1	-	82444003	82449254	789624	7	276,145,97,74,42,123,296,	0,598,2015,2774,3731,5321,5582,
#Partially deleted in new
chr17	82443891	82450776	chr17:82443891-82450776	1	-	82444003	82449254	789624	8	233,145,97,74,42,123,50,77,	0,555,1972,2731,3688,5278,5539,6808,
#Partially deleted in new
chr17	82443901	82450728	chr17:82443901-82450728	1	-	82444003	82444517	789624	5	223,145,97,70,29,	0,545,1962,2721,6798,
#Partially deleted in new
chr17	82443902	82450829	chr17:82443902-82450829	1	-	82444003	82444517	789624	5	222,145,97,74,130,	0,544,1961,2720,6797,
#Partially deleted in new
chr17	82443936	82450737	chr17:82443936-82450737	1	-	82444003	82444517	789624	6	188,145,97,74,42,38,	0,510,1927,2686,3643,6763,
#Partially deleted in new
chr17	82444034	82450775	chr17:82444034-82450775	0	-	82444572	82449254	789624	8	90,145,17,74,42,123,50,76,	0,412,1829,2588,3545,5135,5396,6665,
#Partially deleted in new
chr17	82444072	82447681	chr17:82444072-82447681	0	-	82444072	82444072	8553170	5	52,145,97,74,102,	0,374,1791,2550,3507,
#Partially deleted in new
chr17	82444204	82450749	chr17:82444204-82450749	0	-	82444204	82444204	8553170	3	387,97,50,	0,1659,6495,
#Partially deleted in new
chr17	82444388	82450723	chr17:82444388-82450723	1	-	82444442	82449254	789624	6	203,97,74,42,123,24,	0,1475,2234,3191,4781,6311,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	82444464	82450750	chr17:82444464-82450750	0	-	82444464	82444517	789624	6	127,97,74,42,77,51,	0,1399,2158,3115,3386,6235,
#Partially deleted in new
chr17	82444470	82450743	chr17:82444470-82450743	0	-	82445920	82449254	789624	6	121,97,74,42,119,44,	0,1393,2152,3109,4703,6229,
#Partially deleted in new
chr17	82444497	82450708	chr17:82444497-82450708	0	-	82444497	82449254	789624	7	94,97,74,42,123,50,176,	0,1366,2125,3082,4672,4933,6035,
#Partially deleted in new
chr17	82444530	82450708	chr17:82444530-82450708	0	-	82444530	82449254	789624	6	61,97,74,42,123,176,	0,1333,2092,3049,4639,6002,
#Partially deleted in new
chr17	82445250	82450829	chr17:82445250-82450829	0	-	82445250	82445250	8553170	5	710,74,42,123,130,	0,1372,2329,3919,5449,
#Partially deleted in new
chr17	82445462	82450749	chr17:82445462-82450749	0	-	82445462	82445462	8553170	2	498,50,	0,5237,
#Partially deleted in new
chr17	82445504	82450734	chr17:82445504-82450734	0	-	82445504	82445504	8553170	3	456,74,35,	0,1118,5195,
#Partially deleted in new
chr17	82445557	82450743	chr17:82445557-82450743	0	-	82445557	82445557	8553170	4	399,74,42,44,	0,1065,2022,5142,
#Partially deleted in new
chr17	82445863	82450708	chr17:82445863-82450708	0	-	82445863	82449254	789624	4	97,74,123,176,	0,759,3306,4669,
#Partially deleted in new
chr17	82445863	82450737	chr17:82445863-82450737	0	-	82445863	82445863	8553170	6	97,74,42,119,526,38,	0,759,1716,3310,3567,4836,
#Partially deleted in new
chr17	82448853	82450741	chr17:82448853-82450741	0	-	82448853	82448853	8553170	2	439,42,	0,1846,
#Partially deleted in new
chr17	82449431	82450774	chr17:82449431-82450774	0	-	82449431	82449431	8553170	2	525,75,	0,1268,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82449714	82450768	chr17:82449714-82450768	0	-	82449714	82449714	789624	2	540,69,	0,985,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82449754	82450734	chr17:82449754-82450734	0	-	82449754	82449754	8553170	2	524,35,	0,945,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82449900	82450670	chr17:82449900-82450670	0	-	82449900	82449900	8553170	2	354,191,	0,579,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	82454272	82458521	chr17:82454272-82458521	3	-	82454272	82454272	8553170	3	141,111,105,	0,3165,4144,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82457365	82457699	chr17:82457365-82457699	0	-	82457365	82457365	8553170	2	183,27,	0,307,
#Partially deleted in new
chr17	82458179	82468799	chr17:82458179-82468799	0	+	82464355	82468799	789624	4	338,81,144,36,	0,1812,6107,10584,
#Partially deleted in new
chr17	82458184	82488255	chr17:82458184-82488255	1	+	82464355	82488157	789624	11	324,81,144,133,135,119,130,64,138,158,340,	0,1807,6102,10579,14379,20615,22897,25531,26628,27312,29731,
#Partially deleted in new
chr17	82458193	82468863	chr17:82458193-82468863	0	+	82458193	82458193	8553170	3	324,81,100,	0,1798,10570,
#Partially deleted in new
chr17	82458227	82468896	chr17:82458227-82468896	0	+	82458227	82458227	8553170	3	281,81,133,	0,1764,10536,
#Partially deleted in new
chr17	82458358	82472614	chr17:82458358-82472614	0	+	82464355	82472614	789624	6	150,174,81,144,133,51,	0,916,1633,5928,10405,14205,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr17	82458605	82490537	chr17:82458605-82490537	3	+	82458803	82488157	789624	11	225,81,144,133,135,119,130,64,138,158,2622,	0,1386,5681,10158,13958,20194,22476,25110,26207,26891,29310,
#Partially deleted in new
chr17	82458648	82488262	chr17:82458648-82488262	1	+	82458803	82488157	789624	10	182,81,133,135,119,130,64,138,158,347,	0,1343,10115,13915,20151,22433,25067,26164,26848,29267,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	82458663	82488265	chr17:82458663-82488265	1	+	82458803	82488157	789624	13	167,81,144,133,135,119,130,23,118,64,138,158,350,	0,1328,5623,10100,13900,20136,22418,23149,24523,25052,26149,26833,29252,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr17	82458663	82483816	chr17:82458663-82483816	0	+	82458803	82483186	789624	8	167,81,144,133,119,137,131,101,	0,1328,5623,10100,20136,22418,24510,25052,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr17	82458696	82488263	chr17:82458696-82488263	0	+	82458803	82483186	789624	12	134,81,144,133,135,119,137,131,64,138,158,348,	0,1295,5590,10067,13867,20103,22385,24477,25019,26116,26800,29219,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	82458697	82461014	chr17:82458697-82461014	0	+	82458803	82460264	789624	3	133,714,44,	0,1294,2273,
#Partially deleted in new
chr17	82458702	82488215	chr17:82458702-82488215	1	+	82458803	82488157	789624	12	128,81,144,133,135,119,138,130,64,138,158,300,	0,1289,5584,10061,13861,20097,21704,22379,25013,26110,26794,29213,
#Partially deleted in new
chr17	82458710	82484321	chr17:82458710-82484321	0	+	82458803	82478617	789624	8	120,81,144,133,97,119,130,606,	0,1281,5576,10053,19860,20089,22371,25005,
#Partially deleted in new
chr17	82458710	82472618	chr17:82458710-82472618	0	+	82464355	82472618	789624	5	120,73,144,133,55,	0,1289,5576,10053,13853,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	82458711	82488259	chr17:82458711-82488259	0	+	82458711	82458711	8553170	10	119,81,144,133,135,119,130,1235,158,344,	0,1280,5575,10052,13852,20088,22370,25004,26785,29204,
#Partially deleted in new
chr17	82458713	82479993	chr17:82458713-82479993	0	+	82458713	82458713	8553170	7	117,81,144,133,135,119,56,	0,1278,5573,10050,13850,20086,21224,
#Partially deleted in new
chr17	82458723	82484900	chr17:82458723-82484900	0	+	82458803	82484900	789624	8	107,81,144,133,119,130,64,88,	0,1268,5563,10040,20076,22358,24992,26089,
#Partially deleted in new
chr17	82458725	82488065	chr17:82458725-82488065	0	+	82458803	82478617	789624	12	105,81,144,133,135,97,119,130,64,138,158,150,	0,1266,5561,10038,13838,19845,20074,22356,24990,26087,26771,29190,
#Partially deleted in new
chr17	82458745	82479206	chr17:82458745-82479206	0	+	82458745	82458745	8553170	5	85,81,133,135,407,	0,1246,10018,13818,20054,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	82458753	82468787	chr17:82458753-82468787	0	+	82458803	82460264	789624	4	77,332,144,24,	0,1238,5533,10010,
#Partially deleted in new
chr17	82458874	82481093	chr17:82458874-82481093	0	+	82464355	82481093	789624	7	249,81,144,133,135,119,12,	0,1117,5412,9889,13689,19925,22207,
#Deleted in new
chr17	82462600	82464255	chr17:82462600-82464255	3	+	82462600	82462600	8553170	1	1655,	0,
#Partially deleted in new
chr17	82468498	82478827	chr17:82468498-82478827	0	+	82468498	82468498	8553170	3	398,135,28,	0,4065,10301,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82476596	82477924	chr17:82476596-82477924	3	-	82476596	82476596	8553170	2	542,296,	0,1032,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	82480467	82488262	chr17:82480467-82488262	0	+	82480467	82480467	8553170	4	744,1235,158,347,	0,3248,5029,7448,
#Partially deleted in new
chr17	82480998	82488261	chr17:82480998-82488261	0	+	82480998	82480998	8553170	3	213,27,60,	0,2717,7203,
#Partially deleted in new
chr17	82481080	82488062	chr17:82481080-82488062	0	+	82481080	82488062	789624	4	131,64,158,147,	0,2635,4416,6835,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82482097	82483388	chr17:82482097-82483388	3	+	82482097	82482097	8553170	2	685,84,	0,1207,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82484538	82488258	chr17:82484538-82488258	0	+	82484538	82484538	8553170	2	392,38,	0,3682,
#Partially deleted in new
chr17	82484807	82488259	chr17:82484807-82488259	0	+	82484807	82484807	8553170	3	123,158,344,	0,689,3108,
#Partially deleted in new
chr17	82519712	82602392	chr17:82519712-82602392	0	+	82519888	82595840	0	10	595,195,148,147,194,176,297,210,410,1090,	0,43641,48341,52011,63028,64300,66191,67350,76069,81590,
#Partially deleted in new
chr17	82519714	82604607	chr17:82519714-82604607	3	+	82519888	82601499	0	9	593,195,148,147,194,176,297,210,3305,	0,43639,48339,52009,63026,64298,66189,67348,81588,
#Partially deleted in new
chr17	82519976	82571976	chr17:82519976-82571976	0	+	82519976	82519976	8553170	3	331,195,253,	0,43377,51747,
#Partially deleted in new
chr17	82520293	82572122	chr17:82520293-82572122	0	+	82520293	82520293	8553170	4	14,195,148,399,	0,43060,47760,51430,
#Partially deleted in new
chr17	82559339	82582914	chr17:82559339-82582914	0	+	82563501	82582914	789624	5	141,195,148,147,174,	0,4014,8714,12384,23401,
#Partially deleted in new
chr17	82559363	82584030	chr17:82559363-82584030	0	+	82559388	82584030	789624	6	84,195,148,147,194,18,	0,3990,8690,12360,23377,24649,
#Partially deleted in new
chr17	82576615	82577391	chr17:82576615-82577391	7	-	82576615	82576615	16724991	2	248,208,	0,568,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	82578022	82578616	chr17:82578022-82578616	3	+	82578022	82578022	8553170	1	594,	0,
#Partially deleted in new
chr17	82582774	82586043	chr17:82582774-82586043	0	+	82582774	82582774	8553170	4	160,176,20,140,	0,1238,2477,3129,
#Partially deleted in new
chr17	82586129	82587562	chr17:82586129-82587562	0	+	82586129	82587379	789624	2	71,500,	0,933,
#Deleted in new
chr17	82587312	82588411	chr17:82587312-82588411	3	-	82587312	82587312	8553170	2	162,156,	0,943,
#Partially deleted in new
chr17	82593399	82601530	chr17:82593399-82601530	0	+	82593399	82593399	8553170	2	345,228,	0,7903,
#Partially deleted in new
chr17	82593421	82602405	chr17:82593421-82602405	0	+	82593421	82593421	8553170	4	533,410,153,1103,	0,2360,6670,7881,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	82598938	82603182	chr17:82598938-82603182	0	+	82598938	82598938	8553170	1	4244,	0,
#Deleted in new
chr17	82602988	82604178	chr17:82602988-82604178	3	-	82602988	82602988	8553170	1	1190,	0,
#Partially deleted in new
chr17	82603636	82644662	chr17:82603636-82644662	0	+	82603636	82603636	8553170	2	39,692,	0,40334,
#Partially deleted in new
chr17	82614561	82648535	chr17:82614561-82648535	3	-	82615918	82648340	789624	10	1464,122,102,86,191,95,88,102,75,262,	0,1962,2734,4481,7047,10827,12642,16359,29387,33712,
#Partially deleted in new
chr17	82614575	82648318	chr17:82614575-82648318	0	-	82619085	82648318	789624	10	1450,122,102,52,191,95,88,102,75,45,	0,1948,2720,4467,7033,10813,12628,16345,29373,33698,
#Partially deleted in new
chr17	82614581	82619084	chr17:82614581-82619084	0	-	82615918	82619084	789624	5	205,308,122,102,42,	0,1136,1942,2714,4461,
#Partially deleted in new
chr17	82615985	82625535	chr17:82615985-82625535	0	-	82615985	82615985	8553170	6	40,122,102,52,191,147,	0,538,1310,3057,5623,9403,
#Partially deleted in new
chr17	82616014	82636583	chr17:82616014-82636583	0	-	82616014	82616014	8553170	9	11,122,102,86,191,95,88,102,72,	0,509,1281,3028,5594,9374,11189,14906,20497,
#Partially deleted in new
chr17	82616523	82648444	chr17:82616523-82648444	0	-	82619085	82648340	789624	8	122,102,52,191,95,88,75,171,	0,772,2519,5085,8865,10680,27425,31750,
#Partially deleted in new
chr17	82616617	82617519	chr17:82616617-82617519	0	-	82616617	82616617	8553170	2	28,224,	0,678,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	82617353	82625959	chr17:82617353-82625959	0	-	82617353	82617353	8553170	5	44,86,191,95,373,	0,1689,4255,8035,8233,
#Partially deleted in new
chr17	82619063	82648448	chr17:82619063-82648448	0	-	82629614	82648340	789624	8	65,191,95,88,98,102,75,175,	0,2545,6325,8140,10467,11857,24885,29210,
#Partially deleted in new
chr17	82626788	82648553	chr17:82626788-82648553	0	-	82626788	82626788	8553170	5	220,88,102,75,280,	0,415,4132,17160,21485,
#Deleted in new
chr17	82648848	82650657	chr17:82648848-82650657	3	+	82648848	82648848	8553170	1	1809,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr17	82654972	82698728	chr17:82654972-82698728	3	-	82657862	82698596	789624	6	3162,223,78,61,61,274,	0,3518,4607,6014,9523,43482,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82655036	82656881	chr17:82655036-82656881	0	-	82655036	82655036	8553170	2	631,389,	0,1456,
#Partially deleted in new
chr17	82657066	82698687	chr17:82657066-82698687	1	-	82657862	82658518	789624	7	1068,223,78,61,61,465,233,	0,1424,2513,3920,7429,39322,41388,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	82657067	82659589	chr17:82657067-82659589	0	-	82657067	82657067	8553170	1	2522,	0,
#Partially deleted in new
chr17	82657705	82659759	chr17:82657705-82659759	0	-	82657705	82657705	8553170	3	429,223,180,	0,785,1874,
#Partially deleted in new
chr17	82657792	82664895	chr17:82657792-82664895	0	-	82657792	82657792	8553170	5	342,223,78,61,400,	0,698,1787,3194,6703,
#Partially deleted in new
chr17	82657910	82698662	chr17:82657910-82698662	1	-	82658128	82698596	789624	6	224,72,78,61,61,208,	0,580,1669,3076,6585,40544,
#Partially deleted in new
chr17	82657914	82661031	chr17:82657914-82661031	0	-	82658128	82661031	789624	3	220,78,45,	0,1665,3072,
#Deleted in new
chr17	82657976	82658849	chr17:82657976-82658849	0	-	82657976	82657976	8553170	2	158,359,	0,514,
#Partially deleted in new
chr17	82661010	82696870	chr17:82661010-82696870	0	-	82661010	82661010	8553170	3	37,61,482,	0,3485,35378,
#Partially deleted in new
chr17	82661080	82698654	chr17:82661080-82698654	0	-	82661080	82661080	8553170	3	190,61,200,	0,3415,37374,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	82668232	82668307	chr17:82668232-82668307	3	-	82668232	82668232	5263520	1	75,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82713907	82716255	chr17:82713907-82716255	3	-	82713907	82713907	789624	2	209,689,	0,1659,
#Partially deleted in new
chr17	82716682	82728017	chr17:82716682-82728017	3	+	82716755	82727171	789624	6	214,152,92,83,123,1185,	0,2223,3589,6121,9797,10150,
#Partially deleted in new
chr17	82716721	82727501	chr17:82716721-82727501	0	+	82716755	82718473	789624	7	175,128,152,92,83,123,669,	0,1722,2184,3550,6082,9758,10111,
#Partially deleted in new
chr17	82716748	82726916	chr17:82716748-82726916	0	+	82716755	82720813	789624	7	148,152,92,205,83,123,84,	0,2157,3523,4012,6055,9731,10084,
#Partially deleted in new
chr17	82716759	82726906	chr17:82716759-82726906	0	+	82716759	82720268	789624	6	137,152,114,83,123,74,	0,2146,3490,6044,9720,10073,
#Partially deleted in new
chr17	82716773	82727113	chr17:82716773-82727113	0	+	82718914	82727113	789624	5	123,152,92,83,65,	0,2132,3498,6030,10275,
#Partially deleted in new
chr17	82716786	82727143	chr17:82716786-82727143	0	+	82726539	82727143	789624	4	110,83,123,311,	0,6017,9693,10046,
#Partially deleted in new
chr17	82719016	82726493	chr17:82719016-82726493	0	+	82719016	82719016	8553170	5	41,92,81,83,14,	0,1255,1744,3787,7463,
#Partially deleted in new
chr17	82722608	82727097	chr17:82722608-82727097	0	+	82722608	82722608	8553170	3	278,123,265,	0,3871,4224,
#Partially deleted in new
chr17	82727114	82730328	chr17:82727114-82730328	0	+	82727114	82729423	789624	3	53,157,415,	0,2209,2799,
#Partially deleted in new
chr17	82735574	82751197	chr17:82735574-82751197	3	+	82735636	82750755	789624	6	203,152,92,83,123,781,	0,2914,5188,5736,13280,14842,
#Partially deleted in new
chr17	82735629	82741056	chr17:82735629-82741056	0	+	82735629	82735629	8553170	3	148,152,294,	0,2859,5133,
#Partially deleted in new
chr17	82735724	82741526	chr17:82735724-82741526	0	+	82735724	82735724	8553170	4	53,152,92,216,	0,2764,5038,5586,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr17	82736071	82749895	chr17:82736071-82749895	0	+	82736071	82736071	8553170	5	400,899,92,83,1041,	0,1670,4691,5239,12783,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82736071	82737933	chr17:82736071-82737933	0	+	82736071	82736071	8553170	2	362,230,	0,1632,
#Duplicated in new
chr17	82745067	82745709	chr17:82745067-82745709	3	+	82745067	82745067	8553170	1	642,	0,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr17	82752063	82945922	chr17:82752063-82945922	3	+	82752193	82942463	789624	39	314,51,98,102,147,56,133,46,133,137,61,75,95,157,58,30,86,81,74,118,61,23,32,63,77,82,119,92,138,84,159,139,122,78,90,88,110,85,3474,	0,4101,11901,14203,16356,20388,29525,45693,48800,53811,55544,57644,62776,118160,132081,137604,141483,148587,151341,153872,155697,157221,159694,168492,169437,171588,172875,174336,175122,175841,177049,177298,178458,180594,185207,185985,187303,189335,190385,
#Partially deleted in new
chr17	82752157	82942709	chr17:82752157-82942709	1	+	82752193	82942463	789624	40	220,51,98,102,147,56,133,46,133,137,61,75,95,157,58,30,86,81,74,118,61,23,32,63,77,82,119,92,138,84,159,139,122,78,90,114,88,110,85,261,	0,4007,11807,14109,16262,20294,29431,45599,48706,53717,55450,57550,62682,118066,131987,137510,141389,148493,151247,153778,155603,157127,159600,168398,169343,171494,172781,174242,175028,175747,176955,177204,178364,180500,185113,185688,185891,187209,189241,190291,
#Deleted in new
chr17	82795485	82796095	chr17:82795485-82796095	3	-	82795485	82795485	8553170	2	274,139,	0,471,
#Partially deleted in new
chr17	82829434	82840578	chr17:82829434-82840578	3	-	82830141	82832454	789624	3	1443,1618,652,	0,1584,10492,
#Partially deleted in new
chr17	82829928	82840022	chr17:82829928-82840022	1	-	82830141	82831257	789624	3	949,468,96,	0,1090,9998,
#Partially deleted in new
chr17	82858518	82921510	chr17:82858518-82921510	0	+	82900687	82921510	789624	13	149,157,58,30,86,81,74,118,61,23,32,63,10,	0,11705,25626,31149,35028,42132,44886,47417,49242,50766,53239,62037,62982,
#Partially deleted in new
chr17	82858595	82921576	chr17:82858595-82921576	0	+	82905955	82921576	789624	12	72,157,58,30,86,74,118,61,23,32,63,76,	0,11628,25549,31072,34951,44809,47340,49165,50689,53162,61960,62905,
#Partially deleted in new
chr17	82860393	82920606	chr17:82860393-82920606	0	+	82900687	82920606	789624	12	56,157,58,30,86,81,74,118,61,23,32,51,	0,9830,23751,29274,33153,40257,43011,45542,47367,48891,51364,60162,
#Partially deleted in new
chr17	82864290	82911789	chr17:82864290-82911789	0	+	82864290	82864290	8553170	7	137,157,58,118,61,23,32,	0,5933,19854,41645,43470,44994,47467,
#Partially deleted in new
chr17	82884151	82914153	chr17:82884151-82914153	0	+	82884151	82913358	789624	11	51,30,86,81,74,118,61,23,32,139,814,	0,5516,9395,16499,19253,21784,23609,25133,27606,28859,29188,
#Partially deleted in new
chr17	82884800	82926476	chr17:82884800-82926476	0	+	82900687	82926476	789624	14	136,30,86,81,74,118,61,23,32,63,77,82,119,77,	0,4867,8746,15850,18604,21135,22960,24484,26957,35755,36700,38851,40138,41599,
#Partially deleted in new
chr17	82886083	82911765	chr17:82886083-82911765	0	+	82900687	82911765	789624	9	201,30,86,81,74,118,61,23,8,	0,3584,7463,14567,17321,19852,21677,23201,25674,
#Partially deleted in new
chr17	82893063	82925056	chr17:82893063-82925056	0	+	82893175	82925056	789624	11	133,86,74,118,61,23,32,63,77,82,118,	0,483,10341,12872,14697,16221,18694,27492,28437,30588,31875,
#Partially deleted in new
chr17	82893107	82921575	chr17:82893107-82921575	0	+	82893175	82921575	789624	10	89,86,81,74,118,61,23,32,63,75,	0,439,7543,10297,12828,14653,16177,18650,27448,28393,
#Partially deleted in new
chr17	82895824	82929791	chr17:82895824-82929791	0	+	82895824	82895824	8553170	17	166,81,74,118,61,141,23,32,63,77,82,119,92,138,84,159,430,	0,4826,7580,10111,11936,12472,13460,15933,24731,25676,27827,29114,30575,31361,32080,33288,33537,
#Partially deleted in new
chr17	82900541	82926439	chr17:82900541-82926439	0	+	82900687	82926439	789624	11	190,74,118,61,23,32,63,77,82,119,40,	0,2863,5394,7219,8743,11216,20014,20959,23110,24397,25858,
#Partially deleted in new
chr17	82908276	82927311	chr17:82908276-82927311	0	+	82908276	82908276	8553170	9	161,23,32,63,77,82,119,92,126,	0,1008,3481,12279,13224,15375,16662,18123,18909,
#Deleted in new
chr17	82918281	82918785	chr17:82918281-82918785	3	+	82918281	82918281	8553170	1	504,	0,
#Partially deleted in new
chr17	82920459	82929132	chr17:82920459-82929132	0	+	82920459	82920459	8553170	8	159,77,82,119,92,138,84,20,	0,1041,3192,4479,5940,6726,7445,8653,
#Partially deleted in new
chr17	82921015	82927213	chr17:82921015-82927213	0	+	82921015	82921015	8553170	5	562,82,119,92,28,	0,2636,3923,5384,6170,
#Deleted in new
chr17	82926865	82929259	chr17:82926865-82929259	0	+	82926865	82926865	8553170	3	458,84,147,	0,1039,2247,
#Partially deleted in new
chr17	82929137	82942659	chr17:82929137-82942659	0	+	82929137	82942463	789624	8	134,139,122,90,88,110,85,211,	0,224,1384,8133,8911,10229,12261,13311,
#Partially deleted in new
chr17	82929424	82942704	chr17:82929424-82942704	0	+	82929424	82929424	8553170	7	1219,78,90,88,110,85,256,	0,3233,7846,8624,9942,11974,13024,
#Partially deleted in new
chr17	82930457	82941433	chr17:82930457-82941433	0	+	82930457	82930457	8553170	6	186,198,90,88,110,35,	0,2200,6813,7591,8909,10941,
#Partially deleted in new
chr17	82931948	82942571	chr17:82931948-82942571	0	+	82931948	82931948	8553170	7	191,78,90,88,110,85,123,	0,709,5322,6100,7418,9450,10500,
#Partially deleted in new
chr17	82932686	82937847	chr17:82932686-82937847	0	+	82932686	82932686	8553170	2	49,577,	0,4584,
#Deleted in new
chr17	82937215	82942704	chr17:82937215-82942704	0	+	82937215	82937215	8553170	5	145,88,110,85,256,	0,833,2151,4183,5233,
#Deleted in new
chr17	82937569	82942704	chr17:82937569-82942704	0	+	82937569	82937569	8553170	5	390,88,110,85,256,	0,479,1797,3829,4879,
#Deleted in new
chr17	82939041	82942704	chr17:82939041-82942704	0	+	82939041	82939041	8553170	3	435,85,256,	0,2357,3407,
#Deleted in new
chr17	82939400	82942702	chr17:82939400-82942702	0	+	82939400	82941528	789624	2	76,1304,	0,1998,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr17	82942154	83006988	chr17:82942154-83006988	0	-	82946902	82965716	789624	10	508,228,105,75,69,136,125,96,96,1008,	0,1667,4724,14540,15026,15204,18902,23496,62960,63826,
#Deleted in new
chr17	82942464	82944049	chr17:82942464-82944049	0	-	82942464	82942464	8553170	2	218,228,	0,1357,
#Partially deleted in new
chr17	82943790	83051810	chr17:82943790-83051810	3	-	82946902	83051796	789624	13	259,105,75,69,136,125,96,96,66,65,100,117,74,	0,3088,12904,13390,13568,17266,21860,61324,70663,91244,104680,104878,107946,
#Partially deleted in new
chr17	82943790	83048782	chr17:82943790-83048782	0	-	82943790	82943790	8553170	3	259,81,50,	0,3088,104942,
#Partially deleted in new
chr17	82943790	82956801	chr17:82943790-82956801	0	-	82943790	82943790	8553170	3	259,105,107,	0,3088,12904,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr17	82943790	83049166	chr17:82943790-83049166	1	-	82946902	83005649	789624	13	259,105,75,69,136,125,96,96,97,66,65,100,498,	0,3088,12904,13390,13568,17266,21860,61324,61784,70663,91244,104680,104878,
#Partially deleted in new
chr17	82943795	82949948	chr17:82943795-82949948	0	-	82943795	82943795	8553170	2	254,3070,	0,3083,
#Partially deleted in new
chr17	82946893	82961332	chr17:82946893-82961332	0	-	82946893	82946893	8553170	6	90,75,69,136,128,276,	0,9801,10287,10465,13465,14163,
#Partially deleted in new
chr17	82978524	82981508	chr17:82978524-82981508	3	+	82978524	82978524	8553170	3	75,105,50,	0,195,2934,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82978720	82981734	chr17:82978720-82981734	0	+	82978720	82978720	8553170	2	104,276,	0,2738,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82979355	82981738	chr17:82979355-82981738	0	+	82979355	82979355	8553170	2	47,280,	0,2103,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	82981081	82981738	chr17:82981081-82981738	1	+	82981081	82981081	8553170	2	121,280,	0,377,
#Partially deleted in new
chr17	83011427	83048784	chr17:83011427-83048784	0	-	83011427	83011427	8553170	5	76,66,65,100,116,	0,3026,23607,37043,37241,
#Partially deleted in new
chr17	83030760	83051809	chr17:83030760-83051809	0	-	83048547	83051796	789624	5	142,65,100,79,73,	0,4274,17710,17946,20976,
#Deleted in new
chr17	83079690	83095119	chr17:83079690-83095119	3	+	83079815	83094575	789624	4	295,386,60,864,	0,5247,13476,14565,
#Deleted in new
chr17	83080198	83094745	chr17:83080198-83094745	1	+	83085013	83094575	789624	4	31,386,60,490,	0,4739,12968,14057,
#Deleted in new
chr17	83084072	83094844	chr17:83084072-83094844	1	+	83085013	83094575	789624	3	1251,60,589,	0,9094,10183,
#Deleted in new
chr17	83092392	83094476	chr17:83092392-83094476	0	+	83092392	83092392	8553170	3	118,60,221,	0,774,1863,
#Deleted in new
chr17	83094248	83094847	chr17:83094248-83094847	0	+	83094248	83094575	789624	2	174,371,	0,228,
#Deleted in new
chr17	83098376	83098987	chr17:83098376-83098987	3	+	83098376	83098376	8553170	1	611,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	83104254	83106910	chr17:83104254-83106910	3	+	83104254	83104254	8553170	1	2656,	0,
#Deleted in new
chr17	83132646	83136150	chr17:83132646-83136150	3	-	83132646	83132646	8553170	1	3504,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	83144130	83177607	chr17:83144130-83177607	3	+	83144130	83144130	8553170	3	72,450,119,	0,679,33358,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr17	83211995	83220929	chr17:83211995-83220929	3	+	83211995	83211995	8553170	3	249,180,43,	0,372,8891,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	83220425	83221190	chr17:83220425-83221190	1	+	83220425	83220425	8553170	2	135,304,	0,461,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	83220526	83226503	chr17:83220526-83226503	1	-	83220526	83220526	8553170	2	882,94,	0,5883,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr17	83220547	83222956	chr17:83220547-83222956	1	-	83220547	83220547	8553170	1	2409,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr17	83220874	83227721	chr17:83220874-83227721	3	-	83220874	83220874	8553170	2	534,73,	0,6774,
#Partially deleted in new
chr17	83221068	83227705	chr17:83221068-83227705	1	-	83221068	83221068	8553170	2	340,85,	0,6552,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr17	83226896	83240804	chr17:83226896-83240804	7	+	83226896	83226896	16724991	4	337,135,903,881,	0,1498,2095,13027,
#Partially deleted in new
chr17	83239925	83240391	chr17:83239925-83240391	5	+	83239925	83239925	16724991	1	466,	0,
#Deleted in new
chr17_GL000205v2_random	93049	93150	chr17_GL000205v2_random:93049-93150	3	-	93049	93049	8553170	1	101,	0,
#Deleted in new
chr17_GL000205v2_random	99350	104855	chr17_GL000205v2_random:99350-104855	3	-	100359	104759	8553170	4	1027,162,20,259,	0,1029,1193,5246,
#Deleted in new
chr17_GL000258v2_alt	17868	18000	chr17_GL000258v2_alt:17868-18000	7	-	17868	17868	16724991	1	132,	0,
#Deleted in new
chr17_GL000258v2_alt	61904	62560	chr17_GL000258v2_alt:61904-62560	3	-	61904	61904	8553170	2	190,196,	0,460,
#Deleted in new
chr17_GL000258v2_alt	84422	120795	chr17_GL000258v2_alt:84422-120795	3	-	85976	120777	789624	17	1732,106,135,78,99,123,109,99,105,91,68,66,84,81,183,408,675,	0,1842,2081,2305,2585,2766,3014,4047,8805,9710,10120,10360,10536,10692,11015,11767,35698,
#Deleted in new
chr17_GL000258v2_alt	84422	100941	chr17_GL000258v2_alt:84422-100941	1	-	85976	100805	789624	16	1732,106,135,78,99,123,109,99,105,91,68,84,81,183,408,193,	0,1842,2081,2305,2585,2766,3014,4047,8805,9710,10120,10536,10692,11015,11767,16326,
#Deleted in new
chr17_GL000258v2_alt	84429	116128	chr17_GL000258v2_alt:84429-116128	1	-	85976	96231	0	17	1725,106,135,78,99,123,109,99,105,91,68,66,84,81,183,408,68,	0,1835,2074,2298,2578,2759,3007,4040,8798,9703,10113,10353,10529,10685,11008,11760,31631,
#Deleted in new
chr17_GL000258v2_alt	84429	122847	chr17_GL000258v2_alt:84429-122847	0	-	84429	84429	8553170	17	1725,106,135,78,99,123,109,99,105,478,84,81,183,408,675,132,134,	0,1835,2074,2298,2578,2759,3007,4040,8798,9703,10529,10685,11008,11760,35691,37689,38284,
#Deleted in new
chr17_GL000258v2_alt	85463	96448	chr17_GL000258v2_alt:85463-96448	1	-	85976	96231	789624	15	691,106,135,78,99,123,109,99,105,91,68,66,84,183,259,	0,801,1040,1264,1544,1725,1973,3006,7764,8669,9079,9319,9495,9974,10726,
#Deleted in new
chr17_GL000258v2_alt	85947	86429	chr17_GL000258v2_alt:85947-86429	0	-	85947	85947	8553170	2	207,165,	0,317,
#Deleted in new
chr17_GL000258v2_alt	85975	86684	chr17_GL000258v2_alt:85975-86684	0	-	85975	85975	8553170	3	179,106,181,	0,289,528,
#Deleted in new
chr17_GL000258v2_alt	85976	120777	chr17_GL000258v2_alt:85976-120777	1	-	85976	120777	789624	16	178,106,135,78,99,123,109,99,105,91,68,84,81,183,408,657,	0,288,527,751,1031,1212,1460,2493,7251,8156,8566,8982,9138,9461,10213,34144,
#Deleted in new
chr17_GL000258v2_alt	86583	87291	chr17_GL000258v2_alt:86583-87291	0	-	86583	86583	8553170	3	55,379,103,	0,144,605,
#Deleted in new
chr17_GL000258v2_alt	87452	87998	chr17_GL000258v2_alt:87452-87998	3	+	87452	87452	8553170	2	303,154,	0,392,
#Deleted in new
chr17_GL000258v2_alt	87725	94182	chr17_GL000258v2_alt:87725-94182	0	-	87725	87725	8553170	4	24,99,105,50,	0,744,5502,6407,
#Deleted in new
chr17_GL000258v2_alt	88034	100903	chr17_GL000258v2_alt:88034-100903	0	-	88034	88034	8553170	9	534,105,91,68,84,81,183,408,155,	0,5193,6098,6508,6924,7080,7403,8155,12714,
#Deleted in new
chr17_GL000258v2_alt	88485	94700	chr17_GL000258v2_alt:88485-94700	0	-	88485	88485	8553170	5	83,89,105,91,158,	0,3608,4742,5647,6057,
#Deleted in new
chr17_GL000258v2_alt	93227	116113	chr17_GL000258v2_alt:93227-116113	0	-	95010	96231	789624	8	105,91,68,84,81,79,408,53,	0,905,1315,1731,1887,2314,2962,22833,
#Deleted in new
chr17_GL000258v2_alt	93287	95216	chr17_GL000258v2_alt:93287-95216	0	-	93287	93287	8553170	5	45,91,68,66,258,	0,845,1255,1495,1671,
#Deleted in new
chr17_GL000258v2_alt	94958	100943	chr17_GL000258v2_alt:94958-100943	0	-	94958	100805	789624	5	84,81,183,237,195,	0,156,479,1402,5790,
#Deleted in new
chr17_GL000258v2_alt	94988	123351	chr17_GL000258v2_alt:94988-123351	0	-	94988	94988	8553170	4	54,506,408,102,	0,126,1201,28261,
#Deleted in new
chr17_GL000258v2_alt	119849	124856	chr17_GL000258v2_alt:119849-124856	1	-	119985	120777	789624	5	946,132,134,952,112,	0,2269,2864,3400,4895,
#Deleted in new
chr17_GL000258v2_alt	119850	123414	chr17_GL000258v2_alt:119850-123414	1	-	119985	120777	789624	4	945,132,134,165,	0,2268,2863,3399,
#Deleted in new
chr17_GL000258v2_alt	126334	181185	chr17_GL000258v2_alt:126334-181185	3	-	128292	172925	0	12	2070,158,64,194,146,918,271,385,627,248,89,93,	0,3577,4263,9566,14720,17457,22272,32312,39201,42000,46543,54758,
#Deleted in new
chr17_GL000258v2_alt	126337	136705	chr17_GL000258v2_alt:126337-136705	0	-	126337	126337	8553170	5	2067,158,64,194,145,	0,3574,4260,9563,10223,
#Deleted in new
chr17_GL000258v2_alt	126338	181169	chr17_GL000258v2_alt:126338-181169	0	-	166018	172925	789624	11	2066,158,64,194,146,918,271,385,627,89,77,	0,3573,4259,9562,14716,17453,22268,32308,39197,46539,54754,
#Deleted in new
chr17_GL000258v2_alt	127905	181170	chr17_GL000258v2_alt:127905-181170	0	-	148792	172925	789624	11	499,158,64,194,146,918,271,627,248,89,78,	0,2006,2692,7995,13149,15886,20701,37630,40429,44972,53187,
#Deleted in new
chr17_GL000258v2_alt	127983	135964	chr17_GL000258v2_alt:127983-135964	0	-	128292	135964	789624	4	421,101,64,64,	0,1928,2614,7917,
#Deleted in new
chr17_GL000258v2_alt	128350	131494	chr17_GL000258v2_alt:128350-131494	0	-	128350	128350	8553170	4	54,158,64,223,	0,1561,2247,2921,
#Deleted in new
chr17_GL000258v2_alt	129980	135938	chr17_GL000258v2_alt:129980-135938	0	-	130561	135938	789624	3	89,200,38,	0,481,5920,
#Deleted in new
chr17_GL000258v2_alt	130091	178299	chr17_GL000258v2_alt:130091-178299	0	-	166018	172925	789624	10	22,64,194,146,918,271,385,627,89,131,	0,506,5809,10963,13700,18515,28555,35444,42786,48077,
#Deleted in new
chr17_GL000258v2_alt	130597	138543	chr17_GL000258v2_alt:130597-138543	0	-	130597	130597	8553170	3	64,194,199,	0,5303,7747,
#Deleted in new
chr17_GL000258v2_alt	143374	150870	chr17_GL000258v2_alt:143374-150870	0	-	143374	143374	8553170	2	1335,1050,	0,6446,
#Deleted in new
chr17_GL000258v2_alt	158683	178303	chr17_GL000258v2_alt:158683-178303	0	-	158683	158683	8553170	3	348,89,135,	0,14194,19485,
#Deleted in new
chr17_GL000258v2_alt	165646	181179	chr17_GL000258v2_alt:165646-181179	0	-	165646	166068	789624	2	516,87,	0,15446,
#Deleted in new
chr17_GL000258v2_alt	165801	181182	chr17_GL000258v2_alt:165801-181182	0	-	165801	172925	789624	4	361,47,89,90,	0,2734,7076,15291,
#Deleted in new
chr17_GL000258v2_alt	166032	181190	chr17_GL000258v2_alt:166032-181190	0	-	166032	166032	8553170	5	130,186,47,89,98,	0,291,2503,6845,15060,
#Deleted in new
chr17_GL000258v2_alt	166131	181182	chr17_GL000258v2_alt:166131-181182	0	-	168330	172925	789624	4	31,343,89,90,	0,2108,6746,14961,
#Deleted in new
chr17_GL000258v2_alt	195711	238676	chr17_GL000258v2_alt:195711-238676	1	-	195780	238673	789624	14	118,140,55,50,105,1532,119,75,72,81,72,72,72,2612,	0,224,442,2199,5138,5813,9283,14774,15408,31783,32511,35381,38229,40353,
#Deleted in new
chr17_GL000258v2_alt	195711	241065	chr17_GL000258v2_alt:195711-241065	3	-	195780	227514	789624	14	118,140,55,50,105,1532,119,75,72,81,72,72,72,1290,	0,224,442,2199,5138,5813,9283,14774,15408,31783,32511,35381,38229,44064,
#Deleted in new
chr17_GL000258v2_alt	195726	238708	chr17_GL000258v2_alt:195726-238708	1	-	195780	238673	789624	12	103,50,105,1532,119,75,72,81,72,72,72,2644,	0,2184,5123,5798,9268,14759,15393,31768,32496,35366,38214,40338,
#Deleted in new
chr17_GL000258v2_alt	213563	213844	chr17_GL000258v2_alt:213563-213844	3	-	213563	213563	8553170	1	281,	0,
#Deleted in new
chr17_GL000258v2_alt	242032	247428	chr17_GL000258v2_alt:242032-247428	7	-	242032	242032	16724991	4	88,94,156,134,	0,2002,4709,5262,
#Deleted in new
chr17_GL000258v2_alt	264218	378518	chr17_GL000258v2_alt:264218-378518	7	-	264218	264218	16724991	13	97,188,75,166,200,156,76,108,167,40,100,86,12,	0,10195,10936,11789,30233,61464,64005,64562,67180,74283,78348,80733,114288,
#Deleted in new
chr17_GL000258v2_alt	389589	440543	chr17_GL000258v2_alt:389589-440543	1	+	392989	440543	789624	5	122,165,111,76,91,	0,3383,8817,41278,50863,
#Deleted in new
chr17_GL000258v2_alt	389618	412028	chr17_GL000258v2_alt:389618-412028	1	+	392989	411925	789624	4	93,165,111,378,	0,3354,8788,22032,
#Deleted in new
chr17_GL000258v2_alt	389634	511415	chr17_GL000258v2_alt:389634-511415	3	+	392989	452194	789624	5	77,165,111,140,219,	0,3338,8772,62441,121562,
#Deleted in new
chr17_GL000258v2_alt	389641	452607	chr17_GL000258v2_alt:389641-452607	1	+	392989	452194	789624	5	70,165,111,140,312,	0,3331,8765,62434,62654,
#Deleted in new
chr17_GL000258v2_alt	389654	416746	chr17_GL000258v2_alt:389654-416746	1	+	392989	416593	789624	4	57,165,111,158,	0,3318,8752,26934,
#Deleted in new
chr17_GL000258v2_alt	389660	421081	chr17_GL000258v2_alt:389660-421081	1	+	392989	420856	789624	4	51,165,111,254,	0,3312,8746,31167,
#Deleted in new
chr17_GL000258v2_alt	389668	420973	chr17_GL000258v2_alt:389668-420973	1	+	392989	420848	789624	5	43,165,111,266,146,	0,3304,8738,21982,31159,
#Deleted in new
chr17_GL000258v2_alt	398454	442218	chr17_GL000258v2_alt:398454-442218	0	+	398454	414060	789624	4	63,266,99,1766,	0,13196,15600,41998,
#Deleted in new
chr17_GL000258v2_alt	413624	456611	chr17_GL000258v2_alt:413624-456611	1	-	413701	456608	789624	14	126,140,55,50,105,1532,119,75,72,81,72,72,72,2612,	0,232,450,2206,5145,5820,9283,14779,15412,31801,32531,35402,38251,40375,
#Deleted in new
chr17_GL000258v2_alt	413633	459002	chr17_GL000258v2_alt:413633-459002	3	-	413701	445445	789624	14	117,140,55,50,105,1532,119,75,72,81,72,72,72,1292,	0,223,441,2197,5136,5811,9274,14770,15403,31792,32522,35393,38242,44077,
#Deleted in new
chr17_GL000258v2_alt	413634	456643	chr17_GL000258v2_alt:413634-456643	1	-	413701	456608	789624	12	116,50,105,1532,119,75,72,81,72,72,72,2644,	0,2196,5135,5810,9273,14769,15402,31791,32521,35392,38241,40365,
#Deleted in new
chr17_GL000258v2_alt	431480	431761	chr17_GL000258v2_alt:431480-431761	3	-	431480	431480	8553170	1	281,	0,
#Deleted in new
chr17_GL000258v2_alt	525963	527032	chr17_GL000258v2_alt:525963-527032	7	+	525963	525963	16724991	1	1069,	0,
#Deleted in new
chr17_GL000258v2_alt	542477	543471	chr17_GL000258v2_alt:542477-543471	7	-	542477	542477	16724991	1	994,	0,
#Deleted in new
chr17_GL000258v2_alt	561511	615257	chr17_GL000258v2_alt:561511-615257	0	+	614840	615257	789624	3	27,134,506,	0,1563,53240,
#Deleted in new
chr17_GL000258v2_alt	562164	614867	chr17_GL000258v2_alt:562164-614867	0	+	614840	614867	789624	3	154,134,116,	0,910,52587,
#Deleted in new
chr17_GL000258v2_alt	563070	758707	chr17_GL000258v2_alt:563070-758707	3	+	614840	757142	789624	15	138,1378,142,102,119,196,172,183,189,149,125,58,113,253,1793,	0,51681,128630,140748,157961,158896,174837,185661,186330,186859,191262,192087,192355,193248,193844,
#Deleted in new
chr17_GL000258v2_alt	571713	571815	chr17_GL000258v2_alt:571713-571815	3	+	571713	571713	8553170	1	102,	0,
#Deleted in new
chr17_GL000258v2_alt	590242	590908	chr17_GL000258v2_alt:590242-590908	0	-	590242	590242	8553170	1	666,	0,
#Deleted in new
chr17_GL000258v2_alt	590244	593390	chr17_GL000258v2_alt:590244-593390	3	-	590244	590244	789624	2	354,163,	0,2983,
#Deleted in new
chr17_GL000258v2_alt	590428	593334	chr17_GL000258v2_alt:590428-593334	1	-	590428	590428	8553170	2	170,254,	0,2652,
#Deleted in new
chr17_GL000258v2_alt	593086	615207	chr17_GL000258v2_alt:593086-615207	0	+	614840	615207	789624	2	130,456,	0,21665,
#Deleted in new
chr17_GL000258v2_alt	594072	758667	chr17_GL000258v2_alt:594072-758667	1	+	614840	757142	789624	15	84,1378,142,102,119,196,172,183,189,149,125,58,113,253,1753,	0,20679,97628,109746,126959,127894,143835,154659,155328,155857,160260,161085,161353,162246,162842,
#Deleted in new
chr17_GL000258v2_alt	594178	758667	chr17_GL000258v2_alt:594178-758667	1	+	614840	757142	789624	15	382,1378,142,102,119,196,172,183,189,149,125,58,113,253,1753,	0,20573,97522,109640,126853,127788,143729,154553,155222,155751,160154,160979,161247,162140,162736,
#Deleted in new
chr17_GL000258v2_alt	614749	758468	chr17_GL000258v2_alt:614749-758468	1	+	614840	757142	789624	14	1380,142,102,119,196,172,183,189,149,125,58,113,253,1554,	0,76951,89069,106282,107217,123158,133982,134651,135180,139583,140408,140676,141569,142165,
#Deleted in new
chr17_GL000258v2_alt	614806	758698	chr17_GL000258v2_alt:614806-758698	1	+	614840	757142	789624	13	1323,142,102,119,196,172,183,149,122,58,113,253,1784,	0,76894,89012,106225,107160,123101,133925,135123,139529,140351,140619,141512,142108,
#Deleted in new
chr17_GL000258v2_alt	615864	634092	chr17_GL000258v2_alt:615864-634092	0	+	615864	615864	8553170	2	265,63,	0,18165,
#Deleted in new
chr17_GL000258v2_alt	616043	738275	chr17_GL000258v2_alt:616043-738275	0	+	616043	616043	8553170	6	86,142,102,119,196,368,	0,75657,87775,104988,105923,121864,
#Deleted in new
chr17_GL000258v2_alt	742471	758707	chr17_GL000258v2_alt:742471-758707	0	+	742471	742471	8553170	8	6443,189,149,125,58,113,253,1793,	0,6929,7458,11861,12686,12954,13847,14443,
#Deleted in new
chr17_GL000258v2_alt	748550	758705	chr17_GL000258v2_alt:748550-758705	0	+	748550	748550	8553170	7	364,149,125,58,113,253,1791,	0,1379,5782,6607,6875,7768,8364,
#Deleted in new
chr17_GL000258v2_alt	749065	749957	chr17_GL000258v2_alt:749065-749957	0	+	749065	749065	8553170	2	524,28,	0,864,
#Deleted in new
chr17_GL000258v2_alt	749341	750593	chr17_GL000258v2_alt:749341-750593	0	+	749341	749341	8553170	2	248,664,	0,588,
#Deleted in new
chr17_GL000258v2_alt	749898	755519	chr17_GL000258v2_alt:749898-755519	0	+	749898	749898	8553170	4	180,125,58,94,	0,4434,5259,5527,
#Deleted in new
chr17_GL000258v2_alt	752847	753305	chr17_GL000258v2_alt:752847-753305	3	-	752847	752847	8553170	2	250,54,	0,404,
#Deleted in new
chr17_GL000258v2_alt	755105	756453	chr17_GL000258v2_alt:755105-756453	0	+	755105	755105	8553170	3	110,113,135,	0,320,1213,
#Deleted in new
chr17_GL000258v2_alt	756051	757551	chr17_GL000258v2_alt:756051-757551	0	+	756051	756051	8553170	1	1500,	0,
#Deleted in new
chr17_GL000258v2_alt	760286	893546	chr17_GL000258v2_alt:760286-893546	3	-	764447	826002	0	10	4377,113,82,93,266,127,56,66,150,13,	0,9597,14024,17946,31439,36516,41037,49722,65583,133247,
#Deleted in new
chr17_GL000258v2_alt	763268	826022	chr17_GL000258v2_alt:763268-826022	1	-	764447	826002	0	9	1395,113,82,93,266,127,56,66,153,	0,6615,11042,14964,28457,33534,38055,46740,62601,
#Deleted in new
chr17_GL000258v2_alt	764186	815668	chr17_GL000258v2_alt:764186-815668	0	-	764186	764186	8553170	7	477,113,82,266,127,56,5660,	0,5697,10124,27539,32616,37137,45822,
#Deleted in new
chr17_GL000258v2_alt	764435	893552	chr17_GL000258v2_alt:764435-893552	1	-	764447	826002	0	9	228,113,82,266,127,56,66,150,19,	0,5448,9875,27290,32367,36888,45573,61434,129098,
#Deleted in new
chr17_GL000258v2_alt	764447	826002	chr17_GL000258v2_alt:764447-826002	1	-	764447	826002	0	10	216,113,82,93,266,127,56,66,87,133,	0,5436,9863,13785,27278,32355,36876,45561,52058,61422,
#Deleted in new
chr17_GL000258v2_alt	764447	826002	chr17_GL000258v2_alt:764447-826002	1	-	764447	826002	0	10	216,113,82,266,127,56,66,87,87,133,	0,5436,9863,27278,32355,36876,45561,49532,52058,61422,
#Deleted in new
chr17_GL000258v2_alt	764447	826002	chr17_GL000258v2_alt:764447-826002	1	-	764447	826002	0	11	216,113,82,93,266,127,56,66,87,87,133,	0,5436,9863,13785,27278,32355,36876,45561,49532,52058,61422,
#Deleted in new
chr17_GL000258v2_alt	764447	826002	chr17_GL000258v2_alt:764447-826002	1	-	764447	826002	789624	13	216,113,82,93,266,127,198,56,753,66,87,87,133,	0,5436,9863,13785,27278,32355,33866,36876,40040,45561,49532,52058,61422,
#Deleted in new
chr17_GL000258v2_alt	764447	826002	chr17_GL000258v2_alt:764447-826002	1	-	764447	826002	789624	14	216,113,82,93,266,54,127,198,56,753,66,87,87,133,	0,5436,9863,13785,27278,29965,32355,33866,36876,40040,45561,49532,52058,61422,
#Deleted in new
chr17_GL000258v2_alt	769883	893643	chr17_GL000258v2_alt:769883-893643	0	-	769883	769883	8553170	7	113,266,127,56,66,150,110,	0,21842,26919,31440,40125,55986,123650,
#Deleted in new
chr17_GL000258v2_alt	788695	789140	chr17_GL000258v2_alt:788695-789140	3	-	788723	789110	789624	1	445,	0,
#Deleted in new
chr17_GL000258v2_alt	801323	802760	chr17_GL000258v2_alt:801323-802760	0	-	801323	801323	8553170	2	56,86,	0,1351,
#Deleted in new
chr17_GL000258v2_alt	804487	805552	chr17_GL000258v2_alt:804487-805552	0	-	804487	804487	8553170	1	1065,	0,
#Deleted in new
chr17_GL000258v2_alt	807924	812959	chr17_GL000258v2_alt:807924-812959	0	-	807924	807924	8553170	1	5035,	0,
#Deleted in new
chr17_GL000258v2_alt	810023	893653	chr17_GL000258v2_alt:810023-893653	0	-	819130	826002	789624	5	51,87,135,150,120,	0,6482,9019,15846,83510,
#Deleted in new
chr17_GL000258v2_alt	856247	856525	chr17_GL000258v2_alt:856247-856525	3	-	856247	856247	8553170	1	278,	0,
#Deleted in new
chr17_GL000258v2_alt	877603	880712	chr17_GL000258v2_alt:877603-880712	3	+	877603	877603	8553170	2	45,714,	0,2395,
#Deleted in new
chr17_GL000258v2_alt	889440	892431	chr17_GL000258v2_alt:889440-892431	3	-	889440	889440	789624	1	2991,	0,
#Deleted in new
chr17_GL000258v2_alt	892613	944825	chr17_GL000258v2_alt:892613-944825	3	+	892613	892613	8553170	2	121,806,	0,51406,
#Deleted in new
chr17_GL000258v2_alt	892700	944307	chr17_GL000258v2_alt:892700-944307	1	+	892700	892700	8553170	2	907,288,	0,51319,
#Deleted in new
chr17_GL000258v2_alt	941108	943346	chr17_GL000258v2_alt:941108-943346	3	-	941219	943274	789624	1	2238,	0,
#Deleted in new
chr17_GL000258v2_alt	943423	944195	chr17_GL000258v2_alt:943423-944195	0	+	943423	943423	8553170	2	119,176,	0,596,
#Deleted in new
chr17_GL000258v2_alt	952322	1003890	chr17_GL000258v2_alt:952322-1003890	1	-	953386	971625	789624	12	1205,42,136,86,73,61,154,121,107,120,88,298,	0,1780,1979,2291,2618,4919,5289,5651,6544,19279,28744,51270,
#Deleted in new
chr17_GL000258v2_alt	952322	1003890	chr17_GL000258v2_alt:952322-1003890	1	-	953386	1003625	0	14	1205,42,136,86,73,61,154,121,87,107,86,120,88,298,	0,1780,1979,2291,2618,4919,5289,5651,6218,6544,14427,19279,28744,51270,
#Deleted in new
chr17_GL000258v2_alt	952322	1003890	chr17_GL000258v2_alt:952322-1003890	1	-	953386	1003625	789624	13	1205,136,86,73,61,154,121,87,107,86,120,88,298,	0,1979,2291,2618,4919,5289,5651,6218,6544,14427,19279,28744,51270,
#Deleted in new
chr17_GL000258v2_alt	952322	1003890	chr17_GL000258v2_alt:952322-1003890	1	-	953386	1003625	0	12	1205,42,136,86,73,61,154,121,107,86,88,298,	0,1780,1979,2291,2618,4919,5289,5651,6544,14427,28744,51270,
#Deleted in new
chr17_GL000258v2_alt	952322	1003890	chr17_GL000258v2_alt:952322-1003890	1	-	957244	1003625	789624	11	1205,42,136,86,73,61,154,121,107,88,298,	0,1780,1979,2291,2618,4919,5289,5651,6544,28744,51270,
#Deleted in new
chr17_GL000258v2_alt	952322	1003890	chr17_GL000258v2_alt:952322-1003890	3	-	953386	1003625	0	13	1205,42,136,86,73,61,154,121,107,86,120,88,298,	0,1780,1979,2291,2618,4919,5289,5651,6544,14427,19279,28744,51270,
#Deleted in new
chr17_GL000258v2_alt	1186487	1187956	chr17_GL000258v2_alt:1186487-1187956	7	+	1186487	1186487	16724991	1	1469,	0,
#Deleted in new
chr17_GL000258v2_alt	1209455	1209926	chr17_GL000258v2_alt:1209455-1209926	5	+	1209455	1209455	16724991	1	471,	0,
#Deleted in new
chr17_GL000258v2_alt	1209818	1211092	chr17_GL000258v2_alt:1209818-1211092	7	+	1209818	1209818	16724991	2	107,191,	0,1083,
#Deleted in new
chr17_GL000258v2_alt	1350719	1350821	chr17_GL000258v2_alt:1350719-1350821	3	+	1350719	1350719	8553170	1	102,	0,
#Deleted in new
chr17_GL000258v2_alt	1397271	1398561	chr17_GL000258v2_alt:1397271-1398561	7	+	1397271	1397271	16724991	1	1290,	0,
#Deleted in new
chr17_GL000258v2_alt	1460409	1461403	chr17_GL000258v2_alt:1460409-1461403	7	+	1460409	1460409	16724991	1	994,	0,
#Deleted in new
chr17_GL000258v2_alt	1475344	1476416	chr17_GL000258v2_alt:1475344-1476416	7	-	1475344	1475344	16724991	1	1072,	0,
#Deleted in new
chr17_GL000258v2_alt	1490042	1495436	chr17_GL000258v2_alt:1490042-1495436	7	+	1490042	1490042	16724991	4	132,156,94,88,	0,529,3298,5306,
#Deleted in new
chr17_GL000258v2_alt	1496401	1541755	chr17_GL000258v2_alt:1496401-1541755	3	+	1509961	1541686	789624	14	1293,72,72,72,81,72,75,119,1532,105,50,55,140,118,	0,7055,9905,12779,13499,29882,30514,35961,38012,40114,43110,44857,44990,45236,
#Deleted in new
chr17_GL000258v2_alt	1498761	1541761	chr17_GL000258v2_alt:1498761-1541761	1	+	1498796	1541686	789624	12	2644,72,72,72,81,72,75,119,1532,105,50,124,	0,4695,7545,10419,11139,27522,28154,33601,35652,37754,40750,42876,
#Deleted in new
chr17_GL000258v2_alt	1498793	1541763	chr17_GL000258v2_alt:1498793-1541763	1	+	1498796	1541686	789624	14	2612,72,72,72,81,72,75,119,1532,105,50,55,140,126,	0,4663,7513,10387,11107,27490,28122,33569,35620,37722,40718,42465,42598,42844,
#Deleted in new
chr17_GL000258v2_alt	1502796	1565723	chr17_GL000258v2_alt:1502796-1565723	3	-	1503209	1562375	789624	5	312,140,111,165,70,	0,392,54065,59431,62857,
#Deleted in new
chr17_GL000258v2_alt	1523629	1523910	chr17_GL000258v2_alt:1523629-1523910	3	+	1523629	1523629	8553170	1	281,	0,
#Deleted in new
chr17_GL000258v2_alt	1534308	1565704	chr17_GL000258v2_alt:1534308-1565704	1	-	1534533	1562375	789624	4	254,111,165,51,	0,22553,27919,31345,
#Deleted in new
chr17_GL000258v2_alt	1538643	1565710	chr17_GL000258v2_alt:1538643-1565710	1	-	1538796	1562375	789624	4	158,111,165,57,	0,18218,23584,27010,
#Deleted in new
chr17_GL000258v2_alt	1540164	1565746	chr17_GL000258v2_alt:1540164-1565746	1	-	1543462	1562375	789624	4	3573,111,165,93,	0,16697,22063,25489,
#Deleted in new
chr17_GL000258v2_alt	1544935	1548903	chr17_GL000258v2_alt:1544935-1548903	3	-	1544935	1544935	8553170	2	1858,327,	0,3641,
#Deleted in new
chr17_GL000258v2_alt	1576738	1743341	chr17_GL000258v2_alt:1576738-1743341	3	+	1576845	1741700	789624	21	119,86,100,40,167,108,76,156,200,166,75,188,96,157,134,67,80,135,114,56,1663,	0,33537,35909,39706,46694,49371,49960,52421,83564,102054,102998,103626,113909,120115,123005,135701,138007,158910,160640,164452,164940,
#Deleted in new
chr17_GL000258v2_alt	1576824	1626752	chr17_GL000258v2_alt:1576824-1626752	0	+	1576845	1623480	789624	6	33,86,100,167,108,54,	0,33451,35823,46608,49285,49874,
#Deleted in new
chr17_GL000258v2_alt	1576829	1616677	chr17_GL000258v2_alt:1576829-1616677	0	+	1576829	1576829	8553170	4	28,86,100,233,	0,33446,35818,39615,
#Deleted in new
chr17_GL000258v2_alt	1577090	1612698	chr17_GL000258v2_alt:1577090-1612698	0	+	1610278	1612698	789624	3	227,86,51,	0,33185,35557,
#Deleted in new
chr17_GL000258v2_alt	1588512	1626203	chr17_GL000258v2_alt:1588512-1626203	0	+	1610278	1626203	789624	6	82,86,100,40,167,94,	0,21763,24135,27932,34920,37597,
#Deleted in new
chr17_GL000258v2_alt	1610067	1741936	chr17_GL000258v2_alt:1610067-1741936	1	+	1610278	1741700	789624	20	294,100,40,167,108,76,156,200,166,75,188,96,157,134,67,80,135,114,56,258,	0,2580,6377,13365,16042,16631,19092,50235,68725,69669,70297,80580,86786,89676,102372,104678,125581,127311,131123,131611,
#Deleted in new
chr17_GL000258v2_alt	1699039	1737459	chr17_GL000258v2_alt:1699039-1737459	0	+	1699832	1737459	789624	6	213,134,67,80,135,81,	0,704,13400,15706,36609,38339,
#Deleted in new
chr17_GL000258v2_alt	1712446	1741714	chr17_GL000258v2_alt:1712446-1741714	0	+	1712446	1741472	789624	7	60,80,135,114,56,99,36,	0,2299,23202,24932,28744,28929,29232,
#Deleted in new
chr17_GL000258v2_alt	1748387	1804487	chr17_GL000258v2_alt:1748387-1804487	3	-	1754198	1804324	789624	5	2113,488,266,242,243,	0,5803,7274,11154,55857,
#Deleted in new
chr17_GL383563v3_alt	4098	16866	chr17_GL383563v3_alt:4098-16866	3	-	4098	4098	8553170	5	1638,58,191,65,144,	0,1731,7267,11715,12624,
#Deleted in new
chr17_GL383563v3_alt	30795	30899	chr17_GL383563v3_alt:30795-30899	3	-	30795	30795	8553170	1	104,	0,
#Deleted in new
chr17_GL383563v3_alt	37493	58578	chr17_GL383563v3_alt:37493-58578	3	-	37493	37493	8553170	7	304,59,66,216,132,110,196,	0,1399,3615,4564,8066,9261,20889,
#Deleted in new
chr17_GL383563v3_alt	77525	79067	chr17_GL383563v3_alt:77525-79067	3	+	77590	78942	789624	3	120,200,158,	0,677,1384,
#Deleted in new
chr17_GL383563v3_alt	82788	120568	chr17_GL383563v3_alt:82788-120568	3	-	87440	120411	789624	9	4789,97,82,158,127,110,75,80,530,	0,5384,6322,13433,18628,19294,21343,28670,37250,
#Deleted in new
chr17_GL383563v3_alt	96020	102174	chr17_GL383563v3_alt:96020-102174	0	-	96020	96020	8553170	3	359,127,92,	0,5396,6062,
#Deleted in new
chr17_GL383563v3_alt	103541	120102	chr17_GL383563v3_alt:103541-120102	0	-	103541	103541	8553170	4	199,75,80,64,	0,590,7917,16497,
#Deleted in new
chr17_GL383563v3_alt	122755	130502	chr17_GL383563v3_alt:122755-130502	3	-	122755	122755	8553170	3	635,162,386,	0,3272,7361,
#Deleted in new
chr17_GL383563v3_alt	157540	324250	chr17_GL383563v3_alt:157540-324250	1	-	158892	298978	789624	10	1424,149,114,175,87,130,144,113,176,96,	0,3154,9452,41191,93681,133195,135145,141361,147653,166614,
#Deleted in new
chr17_GL383563v3_alt	157543	324540	chr17_GL383563v3_alt:157543-324540	3	-	158892	298978	789624	9	1421,149,114,175,130,144,113,176,386,	0,3151,9449,41188,133192,135142,141358,147650,166611,
#Deleted in new
chr17_GL383563v3_alt	158367	160974	chr17_GL383563v3_alt:158367-160974	0	-	158367	158367	8553170	2	597,280,	0,2327,
#Deleted in new
chr17_GL383563v3_alt	158685	324285	chr17_GL383563v3_alt:158685-324285	1	-	158892	298978	789624	8	279,149,114,175,130,144,113,131,	0,2009,8307,40046,132050,134000,140216,165469,
#Deleted in new
chr17_GL383563v3_alt	158812	299015	chr17_GL383563v3_alt:158812-299015	1	-	158892	298978	789624	8	152,149,114,175,87,130,144,114,	0,1882,8180,39919,92409,131923,133873,140089,
#Deleted in new
chr17_GL383563v3_alt	158812	299015	chr17_GL383563v3_alt:158812-299015	1	-	158892	298978	789624	7	152,149,114,175,130,144,114,	0,1882,8180,39919,131923,133873,140089,
#Deleted in new
chr17_GL383563v3_alt	158844	185708	chr17_GL383563v3_alt:158844-185708	0	-	158844	158844	8553170	4	120,149,114,186,	0,1850,8148,26678,
#Deleted in new
chr17_GL383563v3_alt	158864	199308	chr17_GL383563v3_alt:158864-199308	0	-	158864	158864	8553170	5	100,149,114,175,56,	0,1830,8128,39867,40388,
#Deleted in new
chr17_GL383563v3_alt	159742	290796	chr17_GL383563v3_alt:159742-290796	0	-	159742	159742	8553170	6	61,149,114,175,87,61,	0,952,7250,38989,91479,130993,
#Deleted in new
chr17_GL383563v3_alt	167066	276383	chr17_GL383563v3_alt:167066-276383	0	-	167066	167066	8553170	4	40,175,87,266,	0,31665,84155,109051,
#Deleted in new
chr17_GL383563v3_alt	198740	310226	chr17_GL383563v3_alt:198740-310226	0	-	198740	298978	789624	6	166,87,130,144,113,180,	0,52481,91995,93945,100161,111306,
#Deleted in new
chr17_GL383563v3_alt	198764	324233	chr17_GL383563v3_alt:198764-324233	0	-	198764	298978	789624	6	142,87,130,144,113,198,	0,52457,91971,93921,100137,125271,
#Deleted in new
chr17_GL383563v3_alt	198811	302462	chr17_GL383563v3_alt:198811-302462	0	-	198811	298978	789624	5	95,130,144,113,104,	0,91924,93874,100090,103547,
#Deleted in new
chr17_GL383563v3_alt	198887	310292	chr17_GL383563v3_alt:198887-310292	0	-	198887	298978	789624	6	19,87,130,144,113,44,	0,52334,91848,93798,100014,111361,
#Deleted in new
chr17_GL383563v3_alt	230222	298966	chr17_GL383563v3_alt:230222-298966	0	-	230440	298966	789624	5	266,87,130,144,65,	0,20999,60513,62463,68679,
#Deleted in new
chr17_GL383563v3_alt	251222	359308	chr17_GL383563v3_alt:251222-359308	0	-	251222	298978	789624	5	86,130,144,113,58,	0,39513,41463,47679,108028,
#Deleted in new
chr17_GL383563v3_alt	251281	310840	chr17_GL383563v3_alt:251281-310840	0	-	251281	298978	789624	5	27,130,144,113,152,	0,39454,41404,47620,59407,
#Deleted in new
chr17_GL383563v3_alt	290756	359287	chr17_GL383563v3_alt:290756-359287	0	-	290756	298978	789624	5	109,144,113,176,37,	0,1929,8145,14437,68494,
#Deleted in new
chr17_GL383563v3_alt	290822	312855	chr17_GL383563v3_alt:290822-312855	0	-	290822	298978	789624	4	43,144,113,271,	0,1863,8079,21762,
#Deleted in new
chr17_GL383563v3_alt	290837	305501	chr17_GL383563v3_alt:290837-305501	0	-	290837	298978	789624	4	28,144,113,308,	0,1848,8064,14356,
#Deleted in new
chr17_GL383563v3_alt	292793	310054	chr17_GL383563v3_alt:292793-310054	0	-	292793	298978	789624	3	36,113,338,	0,6108,16923,
#Deleted in new
chr17_GL383563v3_alt	292805	293888	chr17_GL383563v3_alt:292805-293888	3	+	292805	292805	8553170	2	219,192,	0,891,
#Deleted in new
chr17_GL383563v3_alt	292930	293888	chr17_GL383563v3_alt:292930-293888	0	+	292930	292930	8553170	2	115,192,	0,766,
#Deleted in new
chr17_GL383563v3_alt	302639	304920	chr17_GL383563v3_alt:302639-304920	0	+	302639	302639	8553170	3	517,67,430,	0,595,1851,
#Deleted in new
chr17_GL383563v3_alt	302639	304923	chr17_GL383563v3_alt:302639-304923	3	+	302639	302639	789624	3	513,67,433,	0,595,1851,
#Deleted in new
chr17_GL383563v3_alt	302668	304920	chr17_GL383563v3_alt:302668-304920	0	+	302668	302668	8553170	1	2252,	0,
#Deleted in new
chr17_GL383563v3_alt	302949	303586	chr17_GL383563v3_alt:302949-303586	0	+	302949	302949	8553170	2	203,352,	0,285,
#Deleted in new
chr17_GL383563v3_alt	303576	304879	chr17_GL383563v3_alt:303576-304879	1	+	303576	303576	8553170	2	114,389,	0,914,
#Deleted in new
chr17_GL383563v3_alt	304640	307266	chr17_GL383563v3_alt:304640-307266	0	-	304640	304640	8553170	3	109,176,248,	0,553,2378,
#Deleted in new
chr17_GL383563v3_alt	320352	324244	chr17_GL383563v3_alt:320352-324244	0	-	320352	320352	8553170	3	188,156,90,	0,310,3802,
#Deleted in new
chr17_GL383563v3_alt	324080	330528	chr17_GL383563v3_alt:324080-330528	3	+	324080	324080	8553170	2	225,523,	0,5925,
#Deleted in new
chr17_GL383563v3_alt	326178	329829	chr17_GL383563v3_alt:326178-329829	3	+	326178	326178	8553170	2	733,180,	0,3471,
#Deleted in new
chr17_GL383564v2_alt	7886	30513	chr17_GL383564v2_alt:7886-30513	3	-	7886	7886	8553170	4	1696,211,1897,86,	0,13565,14732,22541,
#Deleted in new
chr17_GL383564v2_alt	8412	12183	chr17_GL383564v2_alt:8412-12183	3	+	8412	12058	789624	7	492,83,157,162,126,221,234,	0,679,1589,2089,2329,2936,3537,
#Deleted in new
chr17_GL383564v2_alt	20347	30520	chr17_GL383564v2_alt:20347-30520	0	-	20347	20347	789624	3	170,1897,93,	0,2271,10080,
#Deleted in new
chr17_GL383564v2_alt	21160	26424	chr17_GL383564v2_alt:21160-26424	7	+	21160	21160	16724991	7	429,83,157,162,126,221,115,	0,1837,2986,3444,3681,4160,5149,
#Deleted in new
chr17_GL383564v2_alt	35368	39237	chr17_GL383564v2_alt:35368-39237	3	+	35421	38945	789624	7	401,83,157,162,126,221,446,	0,597,1016,1969,2222,2524,3423,
#Deleted in new
chr17_GL383564v2_alt	50553	55289	chr17_GL383564v2_alt:50553-55289	3	+	50584	54899	789624	7	505,83,157,162,126,221,478,	0,608,1191,2673,2926,3228,4258,
#Deleted in new
chr17_GL383564v2_alt	57860	62596	chr17_GL383564v2_alt:57860-62596	3	+	57891	62206	789624	7	505,83,157,162,126,221,478,	0,608,1191,2673,2926,3228,4258,
#Deleted in new
chr17_GL383564v2_alt	70460	76767	chr17_GL383564v2_alt:70460-76767	3	+	70510	76425	789624	7	398,83,157,162,126,221,460,	0,1810,3174,4247,4500,4801,5847,
#Deleted in new
chr17_GL383564v2_alt	89448	94169	chr17_GL383564v2_alt:89448-94169	3	+	89493	94142	789624	7	393,83,157,162,126,221,145,	0,1384,2173,3590,3843,4144,4576,
#Deleted in new
chr17_GL383564v2_alt	104527	105629	chr17_GL383564v2_alt:104527-105629	7	-	104527	104527	16724991	2	237,177,	0,925,
#Deleted in new
chr17_GL383564v2_alt	110716	114613	chr17_GL383564v2_alt:110716-114613	7	-	110716	110716	16724991	5	61,342,159,72,236,	0,953,2284,2816,3661,
#Deleted in new
chr17_GL383564v2_alt	124565	125344	chr17_GL383564v2_alt:124565-125344	3	+	124610	124928	789624	1	779,	0,
#Deleted in new
chr17_GL383564v2_alt	131007	132561	chr17_GL383564v2_alt:131007-132561	3	+	131007	132561	789624	1	1554,	0,
#Deleted in new
chr17_GL383565v1_alt	6553	68692	chr17_GL383565v1_alt:6553-68692	3	-	6553	6553	8553170	3	558,75,101,	0,20685,62038,
#Deleted in new
chr17_GL383566v1_alt	48629	65219	chr17_GL383566v1_alt:48629-65219	3	-	48629	48629	8553170	2	612,137,	0,16453,
#Deleted in new
chr17_GL383566v1_alt	48629	49282	chr17_GL383566v1_alt:48629-49282	0	-	48629	48629	8553170	2	400,150,	0,503,
#Deleted in new
chr17_GL383566v1_alt	55072	55669	chr17_GL383566v1_alt:55072-55669	3	-	55072	55072	8553170	1	597,	0,
#Deleted in new
chr17_GL383566v1_alt	64676	72790	chr17_GL383566v1_alt:64676-72790	1	-	64676	64676	789624	3	258,151,286,	0,406,7828,
#Deleted in new
chr17_GL383566v1_alt	71461	71699	chr17_GL383566v1_alt:71461-71699	0	+	71668	71699	789624	1	238,	0,
#Deleted in new
chr17_GL383566v1_alt	72302	72447	chr17_GL383566v1_alt:72302-72447	0	+	72428	72447	8553170	1	145,	0,
#Deleted in new
chr17_GL383566v1_alt	72329	85796	chr17_GL383566v1_alt:72329-85796	3	+	72428	85782	789624	2	118,130,	0,13337,
#Deleted in new
chr17_GL383566v1_alt	72343	72447	chr17_GL383566v1_alt:72343-72447	0	+	72428	72447	8553170	1	104,	0,
#Deleted in new
chr17_GL383566v1_alt	77199	77334	chr17_GL383566v1_alt:77199-77334	0	+	77199	77199	8553170	1	135,	0,
#Deleted in new
chr17_GL383566v1_alt	78783	79107	chr17_GL383566v1_alt:78783-79107	0	+	78783	78783	8553170	1	324,	0,
#Deleted in new
chr17_GL383566v1_alt	78841	85464	chr17_GL383566v1_alt:78841-85464	0	+	78841	78841	8553170	2	266,83,	0,6540,
#Deleted in new
chr17_JH159146v1_alt	67	12550	chr17_JH159146v1_alt:67-12550	3	+	67	67	8553170	2	61,197,	0,12286,
#Deleted in new
chr17_JH159146v1_alt	10570	16478	chr17_JH159146v1_alt:10570-16478	3	-	10928	16454	789624	8	456,71,221,126,162,157,83,591,	0,1262,1820,2182,2400,3503,4852,5317,
#Deleted in new
chr17_JH159146v1_alt	25208	34495	chr17_JH159146v1_alt:25208-34495	3	-	25628	34453	789624	8	518,38,221,126,162,157,83,432,	0,1439,2204,3872,4159,4673,6631,8855,
#Deleted in new
chr17_JH159146v1_alt	31730	34178	chr17_JH159146v1_alt:31730-34178	0	-	31730	31730	8553170	2	192,115,	0,2333,
#Deleted in new
chr17_JH159146v1_alt	70697	125321	chr17_JH159146v1_alt:70697-125321	3	+	70697	70697	8553170	4	60,166,159,430,	0,6829,7094,54194,
#Deleted in new
chr17_JH159146v1_alt	71963	86688	chr17_JH159146v1_alt:71963-86688	1	-	72256	85871	789624	9	388,32,221,123,162,157,83,746,75,	0,1776,2658,5542,5750,7244,8677,13512,14650,
#Deleted in new
chr17_JH159146v1_alt	71967	86718	chr17_JH159146v1_alt:71967-86718	3	-	72256	80708	789624	8	384,32,221,123,162,157,83,323,	0,1772,2654,5538,5746,7240,8673,14428,
#Deleted in new
chr17_JH159146v1_alt	71967	86852	chr17_JH159146v1_alt:71967-86852	0	-	77829	80708	789624	7	384,32,221,123,162,83,457,	0,1772,2654,5538,5746,8673,14428,
#Deleted in new
chr17_JH159146v1_alt	74428	86103	chr17_JH159146v1_alt:74428-86103	0	-	74428	74428	8553170	6	414,123,162,157,83,628,	0,3077,3285,4779,6212,11047,
#Deleted in new
chr17_JH159146v1_alt	77505	86813	chr17_JH159146v1_alt:77505-86813	0	-	77829	80708	789624	5	123,162,83,132,200,	0,208,3135,8890,9108,
#Deleted in new
chr17_JH159146v1_alt	78943	85658	chr17_JH159146v1_alt:78943-85658	0	-	79180	85658	789624	3	421,83,183,	0,1697,6532,
#Deleted in new
chr17_JH159146v1_alt	85715	86754	chr17_JH159146v1_alt:85715-86754	0	-	85715	85871	789624	2	506,359,	0,680,
#Deleted in new
chr17_JH159146v1_alt	86009	86845	chr17_JH159146v1_alt:86009-86845	0	-	86009	86009	8553170	3	212,132,232,	0,386,604,
#Deleted in new
chr17_JH159146v1_alt	86099	86902	chr17_JH159146v1_alt:86099-86902	0	-	86099	86099	8553170	3	122,158,289,	0,270,514,
#Deleted in new
chr17_JH159146v1_alt	107811	116287	chr17_JH159146v1_alt:107811-116287	3	-	107995	116251	789624	7	443,221,126,162,157,83,504,	0,1864,3745,3985,5210,6029,7972,
#Deleted in new
chr17_JH159146v1_alt	107856	116281	chr17_JH159146v1_alt:107856-116281	0	-	113563	116251	789624	8	398,221,126,162,157,44,83,498,	0,1819,3700,3940,5165,5667,5984,7927,
#Deleted in new
chr17_JH159146v1_alt	107894	110092	chr17_JH159146v1_alt:107894-110092	0	-	107894	107894	8553170	2	360,417,	0,1781,
#Deleted in new
chr17_JH159146v1_alt	127110	136396	chr17_JH159146v1_alt:127110-136396	0	-	130695	133668	789624	9	581,221,126,335,157,83,448,71,80,	0,1088,3069,3274,4591,5330,6111,8588,9206,
#Deleted in new
chr17_JH159146v1_alt	127110	133703	chr17_JH159146v1_alt:127110-133703	1	-	127591	133668	789624	7	581,221,126,162,157,83,482,	0,1088,3069,3274,4591,5330,6111,
#Deleted in new
chr17_JH159146v1_alt	127276	136530	chr17_JH159146v1_alt:127276-136530	3	-	127591	133668	789624	9	415,221,126,162,157,83,448,71,89,	0,922,2903,3108,4425,5164,5945,8422,9165,
#Deleted in new
chr17_JH159146v1_alt	142824	143528	chr17_JH159146v1_alt:142824-143528	3	-	143195	143492	789624	1	704,	0,
#Deleted in new
chr17_JH159146v1_alt	148587	149289	chr17_JH159146v1_alt:148587-149289	3	-	148951	149248	789624	1	702,	0,
#Deleted in new
chr17_JH159146v1_alt	153875	154155	chr17_JH159146v1_alt:153875-154155	7	-	153875	153875	16724991	1	280,	0,
#Deleted in new
chr17_JH159146v1_alt	157915	158509	chr17_JH159146v1_alt:157915-158509	3	-	158172	158469	789624	1	594,	0,
#Deleted in new
chr17_JH159146v1_alt	157915	168719	chr17_JH159146v1_alt:157915-168719	0	-	157915	157915	8553170	3	525,72,59,	0,8269,10745,
#Deleted in new
chr17_JH159146v1_alt	175420	176597	chr17_JH159146v1_alt:175420-176597	3	-	176025	176550	789624	1	1177,	0,
#Deleted in new
chr17_JH159146v1_alt	179091	179499	chr17_JH159146v1_alt:179091-179499	3	-	179107	179473	789624	1	408,	0,
#Deleted in new
chr17_JH159146v1_alt	183278	184250	chr17_JH159146v1_alt:183278-184250	3	-	183712	184216	789624	1	972,	0,
#Deleted in new
chr17_JH159146v1_alt	189951	190854	chr17_JH159146v1_alt:189951-190854	3	-	190256	190790	789624	1	903,	0,
#Deleted in new
chr17_JH159146v1_alt	195933	196709	chr17_JH159146v1_alt:195933-196709	3	-	196273	196660	789624	1	776,	0,
#Deleted in new
chr17_JH159146v1_alt	196183	196660	chr17_JH159146v1_alt:196183-196660	1	-	196183	196660	789624	2	72,303,	0,174,
#Deleted in new
chr17_JH159146v1_alt	203890	204709	chr17_JH159146v1_alt:203890-204709	1	-	204232	204709	8553170	2	391,323,	0,496,
#Deleted in new
chr17_JH159146v1_alt	203894	204757	chr17_JH159146v1_alt:203894-204757	3	-	204322	204709	8553170	1	863,	0,
#Deleted in new
chr17_JH159146v1_alt	208737	209612	chr17_JH159146v1_alt:208737-209612	3	-	209161	209548	789624	1	875,	0,
#Deleted in new
chr17_JH159146v1_alt	214613	215377	chr17_JH159146v1_alt:214613-215377	3	-	214956	215343	789624	1	764,	0,
#Deleted in new
chr17_JH159146v1_alt	221445	221841	chr17_JH159146v1_alt:221445-221841	7	+	221445	221445	16724991	1	396,	0,
#Deleted in new
chr17_JH159146v1_alt	233653	234810	chr17_JH159146v1_alt:233653-234810	3	+	233710	234343	789624	1	1157,	0,
#Deleted in new
chr17_JH159146v1_alt	246638	247812	chr17_JH159146v1_alt:246638-247812	3	-	247184	247772	789624	2	916,228,	0,946,
#Deleted in new
chr17_JH159146v1_alt	247184	247772	chr17_JH159146v1_alt:247184-247772	1	-	247184	247772	789624	1	588,	0,
#Deleted in new
chr17_JH159146v1_alt	251188	251896	chr17_JH159146v1_alt:251188-251896	3	-	251188	251896	789624	1	708,	0,
#Deleted in new
chr17_JH159146v1_alt	255018	256175	chr17_JH159146v1_alt:255018-256175	3	+	255075	255708	789624	1	1157,	0,
#Deleted in new
chr17_JH159146v1_alt	266930	268110	chr17_JH159146v1_alt:266930-268110	3	-	267477	268065	789624	1	1180,	0,
#Deleted in new
chr17_JH159146v1_alt	272826	273903	chr17_JH159146v1_alt:272826-273903	3	-	273252	273858	789624	1	1077,	0,
#Deleted in new
chr17_JH159147v1_alt	4258	5284	chr17_JH159147v1_alt:4258-5284	3	+	4258	5284	789624	1	1026,	0,
#Deleted in new
chr17_JH159147v1_alt	26299	26506	chr17_JH159147v1_alt:26299-26506	7	-	26299	26299	16724991	1	207,	0,
#Deleted in new
chr17_JH159147v1_alt	30905	31430	chr17_JH159147v1_alt:30905-31430	3	-	30905	31430	789624	1	525,	0,
#Deleted in new
chr17_JH159147v1_alt	40476	41469	chr17_JH159147v1_alt:40476-41469	3	-	40942	41467	8553170	2	716,217,	0,776,
#Deleted in new
chr17_JH159147v1_alt	40481	41467	chr17_JH159147v1_alt:40481-41467	1	-	40942	41467	789624	1	986,	0,
#Deleted in new
chr17_JH159147v1_alt	46202	47169	chr17_JH159147v1_alt:46202-47169	3	-	46670	47135	789624	1	967,	0,
#Deleted in new
chr17_JH159147v1_alt	58322	58787	chr17_JH159147v1_alt:58322-58787	7	-	58322	58322	16724991	1	465,	0,
#Deleted in new
chr17_JH159147v1_alt	63334	64326	chr17_JH159147v1_alt:63334-64326	3	-	63807	64287	789624	1	992,	0,
#Deleted in new
chr17_JH159147v1_alt	69135	70140	chr17_JH159147v1_alt:69135-70140	3	-	69608	70133	789624	1	1005,	0,
#Deleted in new
chr17_JH159148v1_alt	4258	5284	chr17_JH159148v1_alt:4258-5284	3	+	4258	5284	789624	1	1026,	0,
#Deleted in new
chr17_JH159148v1_alt	26299	26506	chr17_JH159148v1_alt:26299-26506	7	-	26299	26299	16724991	1	207,	0,
#Deleted in new
chr17_JH159148v1_alt	30412	31451	chr17_JH159148v1_alt:30412-31451	3	-	30902	31412	789624	1	1039,	0,
#Deleted in new
chr17_JH159148v1_alt	35274	35799	chr17_JH159148v1_alt:35274-35799	7	-	35274	35274	16724991	1	525,	0,
#Deleted in new
chr17_JH159148v1_alt	40468	41771	chr17_JH159148v1_alt:40468-41771	3	-	41249	41732	789624	1	1303,	0,
#Deleted in new
chr17_JH159148v1_alt	50745	51726	chr17_JH159148v1_alt:50745-51726	3	-	51214	51724	789624	1	981,	0,
#Deleted in new
chr17_JH159148v1_alt	56456	57423	chr17_JH159148v1_alt:56456-57423	3	-	56924	57389	789624	1	967,	0,
#Deleted in new
chr17_JH159148v1_alt	68108	69113	chr17_JH159148v1_alt:68108-69113	3	-	68581	69106	789624	1	1005,	0,
#Deleted in new
chr17_JH159148v1_alt	82498	83030	chr17_JH159148v1_alt:82498-83030	7	-	82498	82498	16724991	1	532,	0,
#Deleted in new
chr17_KI270857v1_alt	404	30179	chr17_KI270857v1_alt:404-30179	3	-	1031	29909	789624	8	1022,168,150,246,225,188,80,381,	0,1879,2357,4194,7307,13015,13371,29394,
#Deleted in new
chr17_KI270857v1_alt	728	30239	chr17_KI270857v1_alt:728-30239	0	-	1031	29909	789624	8	698,138,150,246,225,188,80,441,	0,1555,2033,3870,6983,12691,13047,29070,
#Deleted in new
chr17_KI270857v1_alt	871	30156	chr17_KI270857v1_alt:871-30156	1	-	1553	29909	789624	9	555,63,168,150,246,225,188,80,358,	0,633,1412,1890,3727,6840,12548,12904,28927,
#Deleted in new
chr17_KI270857v1_alt	2283	2858	chr17_KI270857v1_alt:2283-2858	0	-	2283	2858	789624	2	168,97,	0,478,
#Deleted in new
chr17_KI270857v1_alt	2846	13843	chr17_KI270857v1_alt:2846-13843	0	-	2846	13843	789624	4	65,246,188,68,	0,1752,10573,10929,
#Deleted in new
chr17_KI270857v1_alt	13036	13900	chr17_KI270857v1_alt:13036-13900	0	-	13036	13036	8553170	2	571,125,	0,739,
#Deleted in new
chr17_KI270857v1_alt	13036	30239	chr17_KI270857v1_alt:13036-30239	1	-	13405	29909	789624	3	571,80,441,	0,739,16762,
#Deleted in new
chr17_KI270857v1_alt	43020	43429	chr17_KI270857v1_alt:43020-43429	3	-	43020	43020	8553170	1	409,	0,
#Deleted in new
chr17_KI270857v1_alt	43986	81774	chr17_KI270857v1_alt:43986-81774	3	+	44101	81477	0	16	122,40,52,85,106,194,121,35,33,110,130,93,82,89,562,337,	0,8261,10569,10709,10877,13185,14623,24452,25111,26677,28969,32912,34622,34825,35022,37451,
#Deleted in new
chr17_KI270857v1_alt	44012	70718	chr17_KI270857v1_alt:44012-70718	0	+	44101	70718	789624	10	96,40,52,76,106,194,121,35,33,55,	0,8235,10543,10683,10851,13159,14597,24426,25085,26651,
#Deleted in new
chr17_KI270857v1_alt	44013	46116	chr17_KI270857v1_alt:44013-46116	0	+	44013	44013	8553170	1	2103,	0,
#Deleted in new
chr17_KI270857v1_alt	44015	57250	chr17_KI270857v1_alt:44015-57250	0	+	54952	57250	789624	7	93,92,40,52,85,106,79,	0,488,8232,10540,10680,10848,13156,
#Deleted in new
chr17_KI270857v1_alt	44015	58644	chr17_KI270857v1_alt:44015-58644	0	+	44015	44015	8553170	5	93,40,414,194,35,	0,8232,10540,13156,14594,
#Deleted in new
chr17_KI270857v1_alt	44015	78846	chr17_KI270857v1_alt:44015-78846	0	+	54952	70664	789624	13	133,40,52,85,106,194,121,33,110,130,93,82,35,	0,8232,10540,10680,10848,13156,14594,25082,26648,28940,32883,34593,34796,
#Deleted in new
chr17_KI270857v1_alt	44015	81766	chr17_KI270857v1_alt:44015-81766	1	+	54952	81634	789624	19	93,92,78,40,52,85,106,194,121,35,33,110,130,93,82,89,90,159,329,	0,488,7756,8232,10540,10680,10848,13156,14594,24423,25082,26648,28940,32883,34593,34796,34993,35396,37422,
#Deleted in new
chr17_KI270857v1_alt	44015	57289	chr17_KI270857v1_alt:44015-57289	0	+	44015	44015	8553170	5	93,40,52,106,118,	0,8232,10540,10848,13156,
#Deleted in new
chr17_KI270857v1_alt	44020	81766	chr17_KI270857v1_alt:44020-81766	1	+	44101	81477	0	16	88,40,52,76,106,194,121,35,33,110,130,93,82,89,562,329,	0,8227,10535,10675,10843,13151,14589,24418,25077,26643,28935,32878,34588,34791,34988,37417,
#Deleted in new
chr17_KI270857v1_alt	44037	58821	chr17_KI270857v1_alt:44037-58821	0	+	44037	44037	8553170	7	71,40,52,85,106,194,212,	0,8210,10518,10658,10826,13134,14572,
#Deleted in new
chr17_KI270857v1_alt	51248	64825	chr17_KI270857v1_alt:51248-64825	3	-	51248	51248	8553170	2	225,263,	0,13314,
#Deleted in new
chr17_KI270857v1_alt	52930	58245	chr17_KI270857v1_alt:52930-58245	3	+	52930	52930	8553170	2	316,105,	0,5210,
#Deleted in new
chr17_KI270857v1_alt	68055	76909	chr17_KI270857v1_alt:68055-76909	0	+	68055	68055	8553170	5	418,33,110,130,11,	0,1042,2608,4900,8843,
#Deleted in new
chr17_KI270857v1_alt	78608	81724	chr17_KI270857v1_alt:78608-81724	0	+	78608	81477	789624	5	82,89,252,181,287,	0,203,400,781,2829,
#Deleted in new
chr17_KI270857v1_alt	79466	99147	chr17_KI270857v1_alt:79466-99147	0	+	79466	98800	789624	2	104,552,	0,19129,
#Deleted in new
chr17_KI270857v1_alt	89477	103371	chr17_KI270857v1_alt:89477-103371	0	-	89477	89477	8553170	14	465,87,52,74,120,93,183,131,801,57,133,182,50,185,	0,718,1227,1786,3254,3487,3942,8049,8556,9551,9812,10269,11778,13709,
#Deleted in new
chr17_KI270857v1_alt	89482	103423	chr17_KI270857v1_alt:89482-103423	3	-	89594	103274	789624	15	460,87,52,74,120,93,183,131,58,57,57,133,182,50,237,	0,713,1222,1781,3249,3482,3937,8044,8551,9295,9546,9807,10264,11773,13704,
#Deleted in new
chr17_KI270857v1_alt	89487	103403	chr17_KI270857v1_alt:89487-103403	1	-	89594	103274	789624	15	455,87,52,74,120,93,183,131,58,57,57,13,182,50,217,	0,708,1217,1776,3244,3477,3932,8039,8546,9290,9541,9922,10259,11768,13699,
#Deleted in new
chr17_KI270857v1_alt	89533	103359	chr17_KI270857v1_alt:89533-103359	0	-	93550	103274	789624	15	409,87,52,74,120,93,183,175,58,57,57,133,182,50,173,	0,662,1171,1730,3198,3431,3886,7949,8500,9244,9495,9756,10213,11722,13653,
#Deleted in new
chr17_KI270857v1_alt	89912	103423	chr17_KI270857v1_alt:89912-103423	0	-	90870	101291	789624	16	30,87,185,74,120,93,183,131,58,57,57,13,182,50,135,66,	0,283,792,1351,2819,3052,3507,7614,8121,8865,9116,9497,9834,11343,13186,13445,
#Deleted in new
chr17_KI270857v1_alt	90277	103422	chr17_KI270857v1_alt:90277-103422	0	-	90870	101291	789624	15	5,185,74,120,93,183,131,58,57,57,133,182,50,135,65,	0,427,986,2454,2687,3142,7249,7756,8500,8751,9012,9469,10978,12821,13080,
#Deleted in new
chr17_KI270857v1_alt	95624	96098	chr17_KI270857v1_alt:95624-96098	7	-	95624	95624	16724991	1	474,	0,
#Deleted in new
chr17_KI270857v1_alt	98467	99144	chr17_KI270857v1_alt:98467-99144	0	+	98467	98467	8553170	1	677,	0,
#Deleted in new
chr17_KI270857v1_alt	99289	103395	chr17_KI270857v1_alt:99289-103395	0	-	99289	99289	8553170	4	133,178,50,209,	0,461,1966,3897,
#Deleted in new
chr17_KI270857v1_alt	103498	120395	chr17_KI270857v1_alt:103498-120395	3	+	103498	103498	8553170	5	152,154,93,105,158,	0,15415,15720,16541,16739,
#Deleted in new
chr17_KI270857v1_alt	106022	115040	chr17_KI270857v1_alt:106022-115040	1	-	106908	114837	0	3	974,112,279,	0,7037,8739,
#Deleted in new
chr17_KI270857v1_alt	106022	115325	chr17_KI270857v1_alt:106022-115325	3	-	106908	114837	0	4	974,112,93,65,	0,7037,8739,9238,
#Deleted in new
chr17_KI270857v1_alt	106533	114823	chr17_KI270857v1_alt:106533-114823	0	-	106801	114823	789624	4	463,82,112,62,	0,3559,6526,8228,
#Deleted in new
chr17_KI270857v1_alt	120093	120390	chr17_KI270857v1_alt:120093-120390	0	+	120093	120093	8553170	1	297,	0,
#Deleted in new
chr17_KI270857v1_alt	124089	124336	chr17_KI270857v1_alt:124089-124336	3	+	124089	124089	8553170	1	247,	0,
#Deleted in new
chr17_KI270857v1_alt	128238	145555	chr17_KI270857v1_alt:128238-145555	3	-	128238	128238	8553170	2	617,4856,	0,12461,
#Deleted in new
chr17_KI270857v1_alt	139569	140804	chr17_KI270857v1_alt:139569-140804	0	-	139569	139569	8553170	2	276,105,	0,1130,
#Deleted in new
chr17_KI270857v1_alt	147166	152542	chr17_KI270857v1_alt:147166-152542	7	-	147166	147166	16724991	1	5376,	0,
#Deleted in new
chr17_KI270857v1_alt	152597	165259	chr17_KI270857v1_alt:152597-165259	1	-	152873	165259	789624	6	378,86,169,123,180,96,	0,2121,6538,7449,12010,12566,
#Deleted in new
chr17_KI270857v1_alt	152597	165305	chr17_KI270857v1_alt:152597-165305	3	-	152873	165259	789624	7	378,86,99,169,123,180,142,	0,2121,4511,6538,7449,12010,12566,
#Deleted in new
chr17_KI270857v1_alt	152611	165301	chr17_KI270857v1_alt:152611-165301	1	-	152873	164814	789624	6	364,86,99,169,123,694,	0,2107,4497,6524,7435,11996,
#Deleted in new
chr17_KI270857v1_alt	152873	165259	chr17_KI270857v1_alt:152873-165259	1	-	152873	165259	789624	4	102,123,180,96,	0,7173,11734,12290,
#Deleted in new
chr17_KI270857v1_alt	152873	165259	chr17_KI270857v1_alt:152873-165259	0	-	157186	165259	789624	6	102,86,99,123,180,96,	0,1845,4235,7173,11734,12290,
#Deleted in new
chr17_KI270857v1_alt	152873	164814	chr17_KI270857v1_alt:152873-164814	1	-	152873	164814	789624	3	102,123,207,	0,7173,11734,
#Deleted in new
chr17_KI270857v1_alt	152873	164814	chr17_KI270857v1_alt:152873-164814	1	-	152873	164814	789624	5	102,86,169,123,207,	0,1845,6262,7173,11734,
#Deleted in new
chr17_KI270857v1_alt	152873	164814	chr17_KI270857v1_alt:152873-164814	0	-	154789	164814	789624	4	102,86,123,207,	0,1845,7173,11734,
#Deleted in new
chr17_KI270857v1_alt	152873	165259	chr17_KI270857v1_alt:152873-165259	0	-	154789	165259	789624	5	102,86,123,180,96,	0,1845,7173,11734,12290,
#Deleted in new
chr17_KI270857v1_alt	152873	165259	chr17_KI270857v1_alt:152873-165259	0	-	157186	165259	789624	5	102,86,99,123,96,	0,1845,4235,7173,12290,
#Deleted in new
chr17_KI270857v1_alt	152873	164814	chr17_KI270857v1_alt:152873-164814	0	-	157186	164814	789624	5	102,86,99,123,207,	0,1845,4235,7173,11734,
#Deleted in new
chr17_KI270857v1_alt	156686	165285	chr17_KI270857v1_alt:156686-165285	1	-	157064	164814	789624	4	521,169,123,678,	0,2449,3360,7921,
#Deleted in new
chr17_KI270857v1_alt	157009	165272	chr17_KI270857v1_alt:157009-165272	1	-	157064	165259	789624	5	198,169,123,180,109,	0,2126,3037,7598,8154,
#Deleted in new
chr17_KI270857v1_alt	157012	164831	chr17_KI270857v1_alt:157012-164831	1	-	157186	164814	789624	3	195,123,224,	0,3034,7595,
#Deleted in new
chr17_KI270857v1_alt	169049	178202	chr17_KI270857v1_alt:169049-178202	1	-	169327	173888	789624	5	348,79,159,227,104,	0,2237,3240,4700,9049,
#Deleted in new
chr17_KI270857v1_alt	169062	178231	chr17_KI270857v1_alt:169062-178231	3	-	169327	173888	789624	5	335,79,159,341,133,	0,2224,3227,4687,9036,
#Deleted in new
chr17_KI270857v1_alt	171220	173794	chr17_KI270857v1_alt:171220-173794	0	-	171282	173794	789624	3	118,159,45,	0,1069,2529,
#Deleted in new
chr17_KI270857v1_alt	198033	200008	chr17_KI270857v1_alt:198033-200008	7	-	198033	198033	16724991	2	124,283,	0,1692,
#Deleted in new
chr17_KI270857v1_alt	198057	200007	chr17_KI270857v1_alt:198057-200007	5	-	198057	198057	16724991	2	100,282,	0,1668,
#Deleted in new
chr17_KI270857v1_alt	211056	212827	chr17_KI270857v1_alt:211056-212827	0	-	212129	212827	789624	3	207,359,121,	0,880,1650,
#Deleted in new
chr17_KI270857v1_alt	211062	216060	chr17_KI270857v1_alt:211062-216060	3	-	212129	215984	0	3	1233,121,152,	0,1644,4846,
#Deleted in new
chr17_KI270857v1_alt	211131	216025	chr17_KI270857v1_alt:211131-216025	0	-	214971	215984	789624	5	1164,121,96,136,117,	0,1575,2305,3790,4777,
#Deleted in new
chr17_KI270857v1_alt	217854	221568	chr17_KI270857v1_alt:217854-221568	1	-	218364	219161	789624	2	598,2667,	0,1047,
#Deleted in new
chr17_KI270857v1_alt	217857	221322	chr17_KI270857v1_alt:217857-221322	1	-	218364	221213	0	3	595,115,188,	0,1044,3277,
#Deleted in new
chr17_KI270857v1_alt	218219	221274	chr17_KI270857v1_alt:218219-221274	0	+	218219	218219	8553170	2	74,97,	0,2958,
#Deleted in new
chr17_KI270857v1_alt	218219	236188	chr17_KI270857v1_alt:218219-236188	3	-	232330	236059	789624	7	233,115,134,140,112,60,205,	0,682,2915,14065,14624,15210,17764,
#Deleted in new
chr17_KI270857v1_alt	218219	236118	chr17_KI270857v1_alt:218219-236118	0	-	232330	236059	789624	8	233,115,48,134,140,112,60,135,	0,682,2092,2915,14065,14624,15210,17764,
#Deleted in new
chr17_KI270857v1_alt	218222	221213	chr17_KI270857v1_alt:218222-221213	3	-	218364	221213	0	4	230,115,48,79,	0,679,2089,2912,
#Deleted in new
chr17_KI270857v1_alt	218250	221239	chr17_KI270857v1_alt:218250-221239	1	-	218897	221213	789624	3	202,119,105,	0,647,2884,
#Deleted in new
chr17_KI270857v1_alt	220148	224834	chr17_KI270857v1_alt:220148-224834	3	+	220148	220148	8553170	2	141,3737,	0,949,
#Deleted in new
chr17_KI270857v1_alt	231003	232934	chr17_KI270857v1_alt:231003-232934	0	-	232330	232934	789624	3	487,140,91,	0,1281,1840,
#Deleted in new
chr17_KI270857v1_alt	232145	236612	chr17_KI270857v1_alt:232145-236612	3	-	232330	236059	0	4	279,112,60,629,	0,698,1284,3838,
#Deleted in new
chr17_KI270857v1_alt	244129	246186	chr17_KI270857v1_alt:244129-246186	3	+	244129	244129	8553170	2	122,1599,	0,458,
#Deleted in new
chr17_KI270857v1_alt	247071	247459	chr17_KI270857v1_alt:247071-247459	3	+	247071	247071	8553170	1	388,	0,
#Deleted in new
chr17_KI270857v1_alt	247623	252527	chr17_KI270857v1_alt:247623-252527	1	-	247764	252462	0	4	253,115,60,141,	0,688,1278,4763,
#Deleted in new
chr17_KI270857v1_alt	247624	248349	chr17_KI270857v1_alt:247624-248349	0	-	248307	248349	789624	2	252,150,	0,575,
#Deleted in new
chr17_KI270857v1_alt	247625	252533	chr17_KI270857v1_alt:247625-252533	3	-	247764	252462	0	4	251,166,60,147,	0,686,1276,4761,
#Deleted in new
chr17_KI270857v1_alt	299167	306920	chr17_KI270857v1_alt:299167-306920	3	+	299230	305929	0	3	130,112,1082,	0,6167,6671,
#Deleted in new
chr17_KI270857v1_alt	305261	306369	chr17_KI270857v1_alt:305261-306369	0	+	305261	305261	8553170	2	185,531,	0,577,
#Deleted in new
chr17_KI270857v1_alt	307753	324731	chr17_KI270857v1_alt:307753-324731	3	+	307753	307753	8553170	4	83,213,93,312,	0,1770,2417,16666,
#Deleted in new
chr17_KI270857v1_alt	316519	324736	chr17_KI270857v1_alt:316519-324736	0	+	316519	316519	8553170	2	76,317,	0,7900,
#Deleted in new
chr17_KI270857v1_alt	323129	325015	chr17_KI270857v1_alt:323129-325015	3	-	323545	324932	0	3	507,115,156,	0,927,1730,
#Deleted in new
chr17_KI270857v1_alt	323129	325043	chr17_KI270857v1_alt:323129-325043	0	-	323129	323129	8553170	2	507,987,	0,927,
#Deleted in new
chr17_KI270857v1_alt	323166	325008	chr17_KI270857v1_alt:323166-325008	0	-	323166	323166	8553170	2	314,803,	0,1039,
#Deleted in new
chr17_KI270857v1_alt	323166	325008	chr17_KI270857v1_alt:323166-325008	1	+	323166	323166	8553170	2	319,796,	0,1046,
#Deleted in new
chr17_KI270857v1_alt	338510	340535	chr17_KI270857v1_alt:338510-340535	3	+	338826	340233	0	3	392,115,390,	0,938,1635,
#Deleted in new
chr17_KI270857v1_alt	338747	340542	chr17_KI270857v1_alt:338747-340542	1	+	338826	340228	789624	2	155,397,	0,1398,
#Deleted in new
chr17_KI270857v1_alt	338761	340535	chr17_KI270857v1_alt:338761-340535	0	+	338761	338761	8553170	1	1774,	0,
#Deleted in new
chr17_KI270857v1_alt	345070	345368	chr17_KI270857v1_alt:345070-345368	3	+	345070	345070	8553170	1	298,	0,
#Deleted in new
chr17_KI270857v1_alt	351097	412395	chr17_KI270857v1_alt:351097-412395	3	+	351097	351097	8553170	3	41,116,313,	0,31391,60985,
#Deleted in new
chr17_KI270857v1_alt	397739	397824	chr17_KI270857v1_alt:397739-397824	7	+	397739	397739	16724991	1	85,	0,
#Deleted in new
chr17_KI270857v1_alt	400588	411483	chr17_KI270857v1_alt:400588-411483	3	-	400902	409938	789624	14	883,153,100,66,95,121,49,110,108,81,40,86,73,116,	0,1845,2364,2927,3377,4188,4852,6153,6592,7143,7706,9029,9278,10779,
#Deleted in new
chr17_KI270857v1_alt	400593	409938	chr17_KI270857v1_alt:400593-409938	1	-	400902	409938	789624	13	878,153,100,66,95,121,49,110,108,81,40,86,72,	0,1840,2359,2922,3372,4183,4847,6148,6587,7138,7701,9024,9273,
#Deleted in new
chr17_KI270857v1_alt	404956	407539	chr17_KI270857v1_alt:404956-407539	0	-	404956	404956	8553170	4	65,49,110,359,	0,484,1785,2224,
#Deleted in new
chr17_KI270857v1_alt	407180	411524	chr17_KI270857v1_alt:407180-411524	0	-	407180	407770	789624	4	108,81,223,157,	0,551,1114,4187,
#Deleted in new
chr17_KI270857v1_alt	407772	411480	chr17_KI270857v1_alt:407772-411480	0	-	409326	409938	789624	6	40,40,223,86,73,113,	0,522,1521,1845,2094,3595,
#Deleted in new
chr17_KI270857v1_alt	411116	412398	chr17_KI270857v1_alt:411116-412398	0	+	411116	411116	8553170	2	137,316,	0,966,
#Deleted in new
chr17_KI270857v1_alt	418138	423786	chr17_KI270857v1_alt:418138-423786	1	+	418138	418138	8553170	3	385,214,460,	0,4579,5188,
#Deleted in new
chr17_KI270857v1_alt	418364	431360	chr17_KI270857v1_alt:418364-431360	3	+	418364	418364	8553170	2	159,327,	0,12669,
#Deleted in new
chr17_KI270857v1_alt	422855	431375	chr17_KI270857v1_alt:422855-431375	0	+	422855	422855	8553170	2	76,317,	0,8203,
#Deleted in new
chr17_KI270857v1_alt	429772	431662	chr17_KI270857v1_alt:429772-431662	3	-	430189	431577	789624	3	508,115,161,	0,929,1729,
#Deleted in new
chr17_KI270857v1_alt	429772	431651	chr17_KI270857v1_alt:429772-431651	0	-	429772	429772	8553170	2	508,950,	0,929,
#Deleted in new
chr17_KI270857v1_alt	429899	431361	chr17_KI270857v1_alt:429899-431361	0	-	429899	429899	8553170	3	381,115,52,	0,802,1410,
#Deleted in new
chr17_KI270857v1_alt	445827	447782	chr17_KI270857v1_alt:445827-447782	3	+	446045	447337	789624	3	294,115,545,	0,852,1410,
#Deleted in new
chr17_KI270857v1_alt	445966	447782	chr17_KI270857v1_alt:445966-447782	1	+	446045	447473	8553170	3	155,115,397,	0,713,1419,
#Deleted in new
chr17_KI270857v1_alt	445966	447782	chr17_KI270857v1_alt:445966-447782	1	+	446045	447468	789624	2	155,382,	0,1434,
#Deleted in new
chr17_KI270857v1_alt	445966	447782	chr17_KI270857v1_alt:445966-447782	1	+	446045	447337	789624	3	155,115,566,	0,713,1250,
#Deleted in new
chr17_KI270857v1_alt	445966	447782	chr17_KI270857v1_alt:445966-447782	1	+	446045	447337	789624	3	155,115,515,	0,713,1301,
#Deleted in new
chr17_KI270857v1_alt	445966	447782	chr17_KI270857v1_alt:445966-447782	1	+	446045	447473	789624	3	155,115,382,	0,713,1434,
#Deleted in new
chr17_KI270857v1_alt	445966	447782	chr17_KI270857v1_alt:445966-447782	1	+	446045	446798	789624	2	155,1103,	0,713,
#Deleted in new
chr17_KI270857v1_alt	445966	447782	chr17_KI270857v1_alt:445966-447782	1	+	446045	447327	789624	2	155,586,	0,1230,
#Deleted in new
chr17_KI270857v1_alt	445966	447782	chr17_KI270857v1_alt:445966-447782	1	+	446045	447327	789624	3	155,115,576,	0,713,1240,
#Deleted in new
chr17_KI270857v1_alt	445966	447782	chr17_KI270857v1_alt:445966-447782	1	+	446045	447200	789624	3	155,115,586,	0,713,1230,
#Deleted in new
chr17_KI270857v1_alt	460149	461711	chr17_KI270857v1_alt:460149-461711	3	-	460149	460149	8553170	2	124,123,	0,1439,
#Deleted in new
chr17_KI270857v1_alt	469350	469458	chr17_KI270857v1_alt:469350-469458	7	-	469350	469350	16724991	1	108,	0,
#Deleted in new
chr17_KI270857v1_alt	476604	476710	chr17_KI270857v1_alt:476604-476710	7	+	476604	476604	16724991	1	106,	0,
#Deleted in new
chr17_KI270857v1_alt	488542	499418	chr17_KI270857v1_alt:488542-499418	3	-	490427	497889	789624	12	884,153,95,121,49,110,108,81,40,86,73,100,	0,1846,3382,4190,4854,6151,6590,7141,7704,9027,9275,10776,
#Deleted in new
chr17_KI270857v1_alt	488857	499457	chr17_KI270857v1_alt:488857-499457	1	-	488857	497889	789624	14	569,153,100,66,95,121,49,110,108,81,40,86,73,139,	0,1531,2054,2617,3067,3875,4539,5836,6275,6826,7389,8712,8960,10461,
#Deleted in new
chr17_KI270857v1_alt	490427	499431	chr17_KI270857v1_alt:490427-499431	1	-	490427	497889	789624	11	114,95,121,49,110,108,81,40,86,73,113,	0,1497,2305,2969,4266,4705,5256,5819,7142,7390,8891,
#Deleted in new
chr17_KI270857v1_alt	509094	555451	chr17_KI270857v1_alt:509094-555451	7	+	509094	509094	16724991	11	93,78,66,108,246,97,34,115,165,105,61,	0,23118,33106,36484,39246,39893,40118,41004,44526,45765,46296,
#Deleted in new
chr17_KI270857v1_alt	520215	520317	chr17_KI270857v1_alt:520215-520317	3	+	520215	520215	8553170	1	102,	0,
#Deleted in new
chr17_KI270857v1_alt	558787	569663	chr17_KI270857v1_alt:558787-569663	3	+	560315	569348	789624	14	99,73,86,40,81,108,110,49,121,95,66,100,153,884,	0,1527,1762,3131,3653,4177,4614,5972,6564,7398,7877,8406,8876,9992,
#Deleted in new
chr17_KI270857v1_alt	612434	623327	chr17_KI270857v1_alt:612434-623327	3	-	612749	621799	789624	14	884,153,100,66,95,121,49,110,108,81,40,86,73,99,	0,1865,2388,2951,3401,4209,4873,6170,6609,7160,7723,9045,9293,10794,
#Deleted in new
chr17_KI270857v1_alt	639729	639836	chr17_KI270857v1_alt:639729-639836	3	-	639729	639729	8553170	1	107,	0,
#Deleted in new
chr17_KI270857v1_alt	663521	674470	chr17_KI270857v1_alt:663521-674470	3	-	663993	672885	789624	14	879,153,100,66,95,121,49,110,108,81,40,86,73,156,	0,1860,2383,2946,3396,4204,4868,6168,6607,7158,7721,9044,9292,10793,
#Deleted in new
chr17_KI270857v1_alt	684861	692439	chr17_KI270857v1_alt:684861-692439	7	-	684861	684861	16724991	11	685,153,100,66,95,121,49,110,108,81,46,	0,1666,2189,2752,3202,4010,4674,5971,6412,6970,7532,
#Deleted in new
chr17_KI270857v1_alt	721532	730727	chr17_KI270857v1_alt:721532-730727	1	+	730179	730308	789624	4	157,87,81,601,	0,6184,7297,8594,
#Deleted in new
chr17_KI270857v1_alt	721538	730726	chr17_KI270857v1_alt:721538-730726	1	+	721603	730308	0	5	151,32,87,81,600,	0,300,6178,7291,8588,
#Deleted in new
chr17_KI270857v1_alt	721581	734214	chr17_KI270857v1_alt:721581-734214	0	+	721581	721581	789624	4	108,87,81,1705,	0,6135,7248,10928,
#Deleted in new
chr17_KI270857v1_alt	721584	728172	chr17_KI270857v1_alt:721584-728172	0	+	721584	721584	8553170	2	105,456,	0,6132,
#Deleted in new
chr17_KI270857v1_alt	721597	732821	chr17_KI270857v1_alt:721597-732821	0	+	721603	727758	789624	4	92,82,81,312,	0,6124,7232,10912,
#Deleted in new
chr17_KI270857v1_alt	721598	733052	chr17_KI270857v1_alt:721598-733052	3	+	721603	732670	0	5	91,32,87,81,543,	0,240,6118,7231,10911,
#Deleted in new
chr17_KI270857v1_alt	721603	730726	chr17_KI270857v1_alt:721603-730726	0	+	721603	727732	789624	5	86,32,82,81,600,	0,235,6118,7226,8523,
#Deleted in new
chr17_KI270857v1_alt	721607	733246	chr17_KI270857v1_alt:721607-733246	0	+	721607	721607	8553170	2	82,737,	0,10902,
#Deleted in new
chr17_KI270857v1_alt	721631	730652	chr17_KI270857v1_alt:721631-730652	0	+	721631	730308	789624	3	58,32,526,	0,207,8495,
#Deleted in new
chr17_KI270857v1_alt	724061	730723	chr17_KI270857v1_alt:724061-730723	0	+	724061	724061	8553170	3	3742,81,597,	0,4768,6065,
#Deleted in new
chr17_KI270857v1_alt	726102	726226	chr17_KI270857v1_alt:726102-726226	3	-	726102	726102	8553170	1	124,	0,
#Deleted in new
chr17_KI270857v1_alt	727127	730216	chr17_KI270857v1_alt:727127-730216	0	+	730179	730216	789624	4	236,87,81,90,	0,589,1702,2999,
#Deleted in new
chr17_KI270857v1_alt	727133	730267	chr17_KI270857v1_alt:727133-730267	0	+	730179	730267	789624	4	230,87,47,141,	0,583,1730,2993,
#Deleted in new
chr17_KI270857v1_alt	730536	769892	chr17_KI270857v1_alt:730536-769892	1	-	731154	767442	789624	26	774,294,86,130,167,104,71,108,153,177,114,122,74,172,91,77,97,103,70,133,114,149,139,155,152,228,	0,2633,3442,5197,5436,7464,8317,9664,10823,11330,11766,12170,13429,15113,15732,17796,17996,18813,19480,20225,29595,31918,32431,36894,38320,39128,
#Deleted in new
chr17_KI270857v1_alt	730541	770319	chr17_KI270857v1_alt:730541-770319	0	-	740075	767442	789624	27	769,294,86,130,167,110,104,1228,108,153,177,114,122,74,172,91,77,97,103,70,133,114,149,139,155,152,655,	0,2628,3437,5192,5431,6214,7459,8312,9659,10818,11325,11761,12165,13424,15108,15727,17791,17991,18808,19475,20220,29590,31913,32426,36889,38315,39123,
#Deleted in new
chr17_KI270857v1_alt	730543	770361	chr17_KI270857v1_alt:730543-770361	0	-	749438	767442	789624	19	767,289,177,114,122,74,172,91,122,632,97,103,133,114,149,139,155,152,697,	0,2626,11323,11759,12163,13422,15106,15725,17018,17234,17989,18806,20218,29588,31911,32424,36887,38313,39121,
#Deleted in new
chr17_KI270857v1_alt	730658	769831	chr17_KI270857v1_alt:730658-769831	1	-	731154	767442	789624	22	652,294,86,130,167,104,63,82,74,172,91,77,97,103,70,133,114,149,139,155,152,167,	0,2511,3320,5075,5314,7342,8195,12088,13307,14991,15610,17674,17874,18691,19358,20103,29473,31796,32309,36772,38198,39006,
#Deleted in new
chr17_KI270857v1_alt	730658	744826	chr17_KI270857v1_alt:730658-744826	2	-	730658	730658	8553170	13	652,294,86,130,167,50,104,71,108,153,177,114,2120,	0,2511,3320,5075,5314,6097,7342,8195,9542,10701,11208,11644,12048,
#Deleted in new
chr17_KI270857v1_alt	730836	734248	chr17_KI270857v1_alt:730836-734248	0	-	730836	730836	8553170	3	474,294,270,	0,2333,3142,
#Deleted in new
chr17_KI270857v1_alt	731088	733787	chr17_KI270857v1_alt:731088-733787	0	-	731088	731088	8553170	2	222,618,	0,2081,
#Deleted in new
chr17_KI270857v1_alt	734573	736672	chr17_KI270857v1_alt:734573-736672	0	-	734573	734573	8553170	2	1290,700,	0,1399,
#Deleted in new
chr17_KI270857v1_alt	736069	739333	chr17_KI270857v1_alt:736069-739333	0	-	736069	736069	8553170	3	70,104,480,	0,1931,2784,
#Deleted in new
chr17_KI270857v1_alt	737718	739036	chr17_KI270857v1_alt:737718-739036	0	-	737718	737718	8553170	2	386,183,	0,1135,
#Deleted in new
chr17_KI270857v1_alt	739805	741710	chr17_KI270857v1_alt:739805-741710	0	-	739805	739805	8553170	2	503,351,	0,1554,
#Deleted in new
chr17_KI270857v1_alt	740058	742011	chr17_KI270857v1_alt:740058-742011	0	-	740058	740058	8553170	3	250,153,145,	0,1301,1808,
#Deleted in new
chr17_KI270857v1_alt	740300	742521	chr17_KI270857v1_alt:740300-742521	0	-	740300	740300	8553170	4	8,153,177,219,	0,1059,1566,2002,
#Deleted in new
chr17_KI270857v1_alt	742326	745757	chr17_KI270857v1_alt:742326-745757	0	-	743819	745757	789624	4	90,122,239,108,	0,380,1474,3323,
#Deleted in new
chr17_KI270857v1_alt	742736	748361	chr17_KI270857v1_alt:742736-748361	0	-	747665	748361	789624	6	92,74,172,91,122,29,	0,1229,2913,3532,4825,5596,
#Deleted in new
chr17_KI270857v1_alt	743970	746162	chr17_KI270857v1_alt:743970-746162	0	-	743970	743970	8553170	2	69,513,	0,1679,
#Deleted in new
chr17_KI270857v1_alt	746110	749391	chr17_KI270857v1_alt:746110-749391	0	-	746110	746110	8553170	4	249,77,97,42,	0,2222,2422,3239,
#Deleted in new
chr17_KI270857v1_alt	747989	769772	chr17_KI270857v1_alt:747989-769772	1	-	748272	767442	789624	11	420,97,103,70,133,114,149,139,155,152,108,	0,543,1360,2027,2772,12142,14465,14978,19441,20867,21675,
#Deleted in new
chr17_KI270857v1_alt	748069	769800	chr17_KI270857v1_alt:748069-769800	1	-	748272	767442	789624	8	340,97,103,70,133,155,152,136,	0,463,1280,1947,2692,19361,20787,21595,
#Deleted in new
chr17_KI270857v1_alt	750778	769714	chr17_KI270857v1_alt:750778-769714	0	-	750778	767442	789624	7	116,114,149,139,155,152,138,	0,9353,11676,12189,16652,18078,18798,
#Deleted in new
chr17_KI270857v1_alt	750821	769123	chr17_KI270857v1_alt:750821-769123	0	-	750821	767442	789624	6	73,114,149,139,155,267,	0,9310,11633,12146,16609,18035,
#Deleted in new
chr17_KI270857v1_alt	762557	769694	chr17_KI270857v1_alt:762557-769694	0	-	762557	767442	789624	6	46,139,155,264,152,30,	0,410,4873,5506,6299,7107,
#Deleted in new
chr17_KI270857v1_alt	762984	769714	chr17_KI270857v1_alt:762984-769714	0	-	762984	767442	789624	4	122,155,152,127,	0,4446,5872,6603,
#Deleted in new
chr17_KI270857v1_alt	767551	769123	chr17_KI270857v1_alt:767551-769123	0	-	767551	767551	8553170	3	34,264,267,	0,512,1305,
#Deleted in new
chr17_KI270857v1_alt	768195	769769	chr17_KI270857v1_alt:768195-769769	0	-	768195	768195	8553170	3	317,152,105,	0,661,1469,
#Deleted in new
chr17_KI270857v1_alt	768825	778339	chr17_KI270857v1_alt:768825-778339	0	-	768825	768825	8553170	3	183,85,310,	0,8159,9204,
#Deleted in new
chr17_KI270857v1_alt	769923	772838	chr17_KI270857v1_alt:769923-772838	0	+	772005	772838	789624	2	35,841,	0,2074,
#Deleted in new
chr17_KI270857v1_alt	769945	773758	chr17_KI270857v1_alt:769945-773758	3	+	772005	773520	789624	2	551,1761,	0,2052,
#Deleted in new
chr17_KI270857v1_alt	770155	777147	chr17_KI270857v1_alt:770155-777147	0	-	770155	770155	8553170	2	382,163,	0,6829,
#Deleted in new
chr17_KI270857v1_alt	770458	774214	chr17_KI270857v1_alt:770458-774214	1	+	772005	773520	789624	2	47,2217,	0,1539,
#Deleted in new
chr17_KI270857v1_alt	779791	825343	chr17_KI270857v1_alt:779791-825343	3	+	780628	824906	789624	14	210,199,81,254,99,114,204,175,195,151,126,149,249,641,	0,731,9932,12195,15885,22775,33686,34948,37047,41003,41543,41753,42700,44911,
#Deleted in new
chr17_KI270857v1_alt	779815	782651	chr17_KI270857v1_alt:779815-782651	1	+	780628	780835	789624	2	186,2129,	0,707,
#Deleted in new
chr17_KI270857v1_alt	779822	817972	chr17_KI270857v1_alt:779822-817972	0	+	779822	779822	8553170	8	179,199,81,254,99,114,1437,1134,	0,700,9901,12164,15854,22744,33655,37016,
#Deleted in new
chr17_KI270857v1_alt	779835	821653	chr17_KI270857v1_alt:779835-821653	0	+	779835	779835	8553170	10	166,199,81,254,99,114,204,175,195,859,	0,687,9888,12151,15841,22731,33642,34904,37003,40959,
#Deleted in new
chr17_KI270857v1_alt	780407	795722	chr17_KI270857v1_alt:780407-795722	0	+	780628	795722	789624	4	314,81,254,46,	0,9316,11579,15269,
#Deleted in new
chr17_KI270857v1_alt	809365	810229	chr17_KI270857v1_alt:809365-810229	7	-	809365	809365	16724991	1	864,	0,
#Deleted in new
chr17_KI270857v1_alt	812151	821648	chr17_KI270857v1_alt:812151-821648	0	+	812151	812151	8553170	6	1530,175,195,151,126,104,	0,2588,4687,8643,9183,9393,
#Deleted in new
chr17_KI270857v1_alt	821387	822322	chr17_KI270857v1_alt:821387-822322	0	+	821387	821387	8553170	2	73,778,	0,157,
#Deleted in new
chr17_KI270857v1_alt	821628	823091	chr17_KI270857v1_alt:821628-823091	0	+	821628	822827	789624	2	65,600,	0,863,
#Deleted in new
chr17_KI270857v1_alt	822430	825072	chr17_KI270857v1_alt:822430-825072	0	+	822430	822430	8553170	2	310,370,	0,2272,
#Deleted in new
chr17_KI270857v1_alt	827292	836300	chr17_KI270857v1_alt:827292-836300	3	+	827504	835697	0	7	359,210,95,130,93,66,645,	0,3173,6364,7122,7872,8173,8363,
#Deleted in new
chr17_KI270857v1_alt	827376	836298	chr17_KI270857v1_alt:827376-836298	1	+	830555	835697	0	7	107,207,95,130,93,66,643,	0,3092,6280,7038,7788,8089,8279,
#Deleted in new
chr17_KI270857v1_alt	827381	835271	chr17_KI270857v1_alt:827381-835271	0	+	827504	830527	789624	5	270,154,95,130,107,	0,3140,6275,7033,7783,
#Deleted in new
chr17_KI270857v1_alt	827409	832507	chr17_KI270857v1_alt:827409-832507	0	+	827409	827409	8553170	3	242,210,186,	0,3056,4912,
#Deleted in new
chr17_KI270857v1_alt	830081	835479	chr17_KI270857v1_alt:830081-835479	0	+	830555	835479	789624	5	594,95,130,93,14,	0,3575,4333,5083,5384,
#Deleted in new
chr17_KI270857v1_alt	831791	836296	chr17_KI270857v1_alt:831791-836296	0	+	831791	831791	8553170	1	4505,	0,
#Deleted in new
chr17_KI270857v1_alt	833659	836250	chr17_KI270857v1_alt:833659-836250	0	+	833659	835697	789624	4	92,130,66,595,	0,755,1806,1996,
#Deleted in new
chr17_KI270857v1_alt	835187	836287	chr17_KI270857v1_alt:835187-836287	0	+	835187	835187	8553170	2	344,632,	0,468,
#Deleted in new
chr17_KI270857v1_alt	837065	844472	chr17_KI270857v1_alt:837065-844472	3	+	837304	843916	789624	5	781,94,133,120,729,	0,981,6105,6334,6678,
#Deleted in new
chr17_KI270857v1_alt	837455	844465	chr17_KI270857v1_alt:837455-844465	1	+	838089	843916	789624	5	215,94,133,120,722,	0,591,5715,5944,6288,
#Deleted in new
chr17_KI270857v1_alt	869591	870221	chr17_KI270857v1_alt:869591-870221	3	+	869591	869591	8553170	1	630,	0,
#Deleted in new
chr17_KI270857v1_alt	920267	920643	chr17_KI270857v1_alt:920267-920643	3	+	920267	920267	8553170	1	376,	0,
#Deleted in new
chr17_KI270857v1_alt	957958	961716	chr17_KI270857v1_alt:957958-961716	3	+	957958	957958	8553170	3	226,33,196,	0,2765,3562,
#Deleted in new
chr17_KI270857v1_alt	1097999	1173025	chr17_KI270857v1_alt:1097999-1173025	3	-	1097999	1097999	789624	3	289,103,98,	0,1343,74928,
#Deleted in new
chr17_KI270857v1_alt	1143344	1173022	chr17_KI270857v1_alt:1143344-1173022	0	-	1143344	1143344	789624	2	545,95,	0,29583,
#Deleted in new
chr17_KI270857v1_alt	1143637	1173016	chr17_KI270857v1_alt:1143637-1173016	1	-	1143637	1143637	789624	4	252,106,193,89,	0,20421,25931,29290,
#Deleted in new
chr17_KI270857v1_alt	1168473	1172986	chr17_KI270857v1_alt:1168473-1172986	1	-	1168473	1168473	789624	2	1403,59,	0,4454,
#Deleted in new
chr17_KI270857v1_alt	1173148	1174208	chr17_KI270857v1_alt:1173148-1174208	0	+	1173148	1173148	8553170	2	459,108,	0,952,
#Deleted in new
chr17_KI270857v1_alt	1173836	1180977	chr17_KI270857v1_alt:1173836-1180977	3	+	1174559	1179493	789624	5	893,227,278,166,1864,	0,2815,3135,4725,5277,
#Deleted in new
chr17_KI270857v1_alt	1173996	1177893	chr17_KI270857v1_alt:1173996-1177893	0	+	1173996	1173996	8553170	3	733,227,880,	0,2655,3017,
#Deleted in new
chr17_KI270857v1_alt	1174821	1177756	chr17_KI270857v1_alt:1174821-1177756	0	+	1174821	1174821	8553170	3	352,227,785,	0,1830,2150,
#Deleted in new
chr17_KI270857v1_alt	1176410	1179820	chr17_KI270857v1_alt:1176410-1179820	3	-	1176410	1176410	8553170	2	177,369,	0,3041,
#Deleted in new
chr17_KI270857v1_alt	1178659	1180049	chr17_KI270857v1_alt:1178659-1180049	0	+	1178659	1179961	789624	2	68,444,	0,946,
#Deleted in new
chr17_KI270857v1_alt	1185239	1293236	chr17_KI270857v1_alt:1185239-1293236	3	+	1185490	1293029	0	12	342,192,411,138,115,202,165,84,68,81,72,271,	0,1339,4011,4895,37741,39643,40371,41898,70129,72058,82736,107726,
#Deleted in new
chr17_KI270857v1_alt	1185383	1225056	chr17_KI270857v1_alt:1185383-1225056	0	+	1185490	1190188	789624	5	198,51,110,115,174,	0,1195,4779,37597,39499,
#Deleted in new
chr17_KI270857v1_alt	1216530	1216786	chr17_KI270857v1_alt:1216530-1216786	3	+	1216530	1216530	8553170	1	256,	0,
#Deleted in new
chr17_KI270857v1_alt	1225021	1257518	chr17_KI270857v1_alt:1225021-1257518	0	+	1225021	1257382	789624	5	63,165,84,68,221,	0,589,2116,30347,32276,
#Deleted in new
chr17_KI270857v1_alt	1227138	1293235	chr17_KI270857v1_alt:1227138-1293235	0	+	1227138	1293029	789624	4	83,68,81,270,	0,28230,30159,65827,
#Deleted in new
chr17_KI270857v1_alt	1234961	1236398	chr17_KI270857v1_alt:1234961-1236398	3	+	1234961	1234961	8553170	2	601,109,	0,1328,
#Deleted in new
chr17_KI270857v1_alt	1255314	1293236	chr17_KI270857v1_alt:1255314-1293236	0	+	1255314	1255314	8553170	3	122,81,271,	0,1983,37651,
#Deleted in new
chr17_KI270857v1_alt	1267726	1293230	chr17_KI270857v1_alt:1267726-1293230	0	+	1267726	1267726	8553170	2	321,265,	0,25239,
#Deleted in new
chr17_KI270857v1_alt	1271029	1279615	chr17_KI270857v1_alt:1271029-1279615	3	+	1271029	1271029	8553170	2	177,234,	0,8352,
#Deleted in new
chr17_KI270857v1_alt	1281824	1289140	chr17_KI270857v1_alt:1281824-1289140	3	-	1281824	1281824	8553170	3	118,79,521,	0,428,6795,
#Deleted in new
chr17_KI270857v1_alt	1287497	1293234	chr17_KI270857v1_alt:1287497-1293234	0	+	1287497	1287497	8553170	2	107,269,	0,5468,
#Deleted in new
chr17_KI270857v1_alt	1290829	1293223	chr17_KI270857v1_alt:1290829-1293223	0	+	1290829	1290829	8553170	2	249,258,	0,2136,
#Deleted in new
chr17_KI270857v1_alt	1291191	1293235	chr17_KI270857v1_alt:1291191-1293235	0	+	1291191	1291191	8553170	1	2044,	0,
#Deleted in new
chr17_KI270857v1_alt	1320987	1645936	chr17_KI270857v1_alt:1320987-1645936	1	-	1323315	1645454	0	56	2452,137,171,155,113,178,136,97,97,121,144,111,121,98,270,147,156,204,156,216,42,45,57,108,97,144,24,119,90,114,114,125,89,101,189,147,135,151,146,82,104,151,164,162,171,210,111,107,99,82,110,139,133,253,47,520,	0,3950,12008,12842,26543,28100,36354,37530,40696,44368,45078,64865,66303,70682,76772,94278,96219,103294,106138,107108,108392,115159,115447,120756,121774,122648,125458,136722,138510,139990,141337,149967,155469,156946,158364,159581,160073,161819,163012,163594,167008,167889,172702,173211,174359,178665,185719,189161,190921,192003,192866,198245,199816,245190,254841,324429,
#Deleted in new
chr17_KI270857v1_alt	1320993	1535757	chr17_KI270857v1_alt:1320993-1535757	1	-	1323315	1535322	0	54	2446,137,171,155,113,178,136,97,97,121,144,111,121,98,270,147,156,204,156,216,42,45,57,108,97,144,24,119,90,114,114,125,89,101,189,147,135,151,146,82,104,151,164,162,171,210,111,107,99,82,110,139,133,488,	0,3944,12002,12836,26537,28094,36348,37524,40690,44362,45072,64859,66297,70676,76766,94272,96213,103288,106132,107102,108386,115153,115441,120750,121768,122642,125452,136716,138504,139984,141331,149961,155463,156940,158358,159575,160067,161813,163006,163588,167002,167883,172696,173205,174353,178659,185713,189155,190915,191997,192860,198239,199810,214276,
#Deleted in new
chr17_KI270857v1_alt	1320993	1595124	chr17_KI270857v1_alt:1320993-1595124	1	-	1323315	1566404	0	56	2446,137,171,155,113,178,136,97,97,121,144,111,121,98,270,147,156,204,156,216,42,45,57,108,97,144,24,119,90,114,114,125,89,101,189,147,135,151,146,82,104,151,164,162,171,210,111,107,99,82,110,139,133,253,47,118,	0,3944,12002,12836,26537,28094,36348,37524,40690,44362,45072,64859,66297,70676,76766,94272,96213,103288,106132,107102,108386,115153,115441,120750,121768,122642,125452,136716,138504,139984,141331,149961,155463,156940,158358,159575,160067,161813,163006,163588,167002,167883,172696,173205,174353,178659,185713,189155,190915,191997,192860,198239,199810,245184,254835,274013,
#Deleted in new
chr17_KI270857v1_alt	1320997	1441791	chr17_KI270857v1_alt:1320997-1441791	0	-	1323315	1441791	789624	23	2442,137,171,155,113,178,136,97,97,121,144,111,121,98,270,156,204,156,216,42,45,57,48,	0,3940,11998,12832,26533,28090,36344,37520,40686,44358,45068,64855,66293,70672,76762,96209,103284,106128,107098,108382,115149,115437,120746,
#Deleted in new
chr17_KI270857v1_alt	1322816	1535757	chr17_KI270857v1_alt:1322816-1535757	1	-	1323315	1520929	0	55	623,137,171,155,113,178,136,97,97,121,144,111,121,98,270,147,156,204,156,216,42,45,57,108,97,144,24,119,90,114,114,125,89,101,189,147,135,151,146,82,104,151,164,162,171,210,111,107,99,82,110,139,133,111,488,	0,2121,10179,11013,24714,26271,34525,35701,38867,42539,43249,63036,64474,68853,74943,92449,94390,101465,104309,105279,106563,113330,113618,118927,119945,120819,123629,134893,136681,138161,139508,148138,153640,155117,156535,157752,158244,159990,161183,161765,165179,166060,170873,171382,172530,176836,183890,187332,189092,190174,191037,196416,197987,202568,212453,
#Deleted in new
chr17_KI270857v1_alt	1322875	1397814	chr17_KI270857v1_alt:1322875-1397814	2	-	1385959	1397814	789624	14	564,137,171,155,113,178,136,97,97,121,144,111,98,55,	0,2062,10120,10954,24655,26212,34466,35642,38808,42480,43190,62977,68794,74884,
#Deleted in new
chr17_KI270857v1_alt	1322879	1324983	chr17_KI270857v1_alt:1322879-1324983	0	-	1323052	1324983	789624	3	297,120,46,	0,440,2058,
#Deleted in new
chr17_KI270857v1_alt	1323221	1358781	chr17_KI270857v1_alt:1323221-1358781	0	-	1323221	1323221	8553170	8	218,137,171,155,113,178,136,264,	0,1716,9774,10608,24309,25866,34120,35296,
#Deleted in new
chr17_KI270857v1_alt	1376600	1377414	chr17_KI270857v1_alt:1376600-1377414	7	-	1376600	1376600	16724991	1	814,	0,
#Deleted in new
chr17_KI270857v1_alt	1379595	1380280	chr17_KI270857v1_alt:1379595-1380280	7	-	1379595	1379595	16724991	1	685,	0,
#Deleted in new
chr17_KI270857v1_alt	1380124	1380452	chr17_KI270857v1_alt:1380124-1380452	5	-	1380124	1380124	16724991	1	328,	0,
#Deleted in new
chr17_KI270857v1_alt	1397578	1424299	chr17_KI270857v1_alt:1397578-1424299	0	-	1397578	1397578	8553170	4	451,147,156,18,	0,17687,19628,26703,
#Deleted in new
chr17_KI270857v1_alt	1398594	1399118	chr17_KI270857v1_alt:1398594-1399118	7	+	1398594	1398594	16724991	1	524,	0,
#Deleted in new
chr17_KI270857v1_alt	1424307	1429464	chr17_KI270857v1_alt:1424307-1429464	0	-	1424307	1424307	8553170	4	178,156,216,85,	0,2818,3788,5072,
#Deleted in new
chr17_KI270857v1_alt	1436436	1458014	chr17_KI270857v1_alt:1436436-1458014	0	-	1436436	1436436	8553170	7	55,108,97,144,24,119,44,	0,5307,6325,7199,10009,21273,21534,
#Deleted in new
chr17_KI270857v1_alt	1443708	1461557	chr17_KI270857v1_alt:1443708-1461557	0	-	1443708	1443708	8553170	5	71,119,90,114,172,	0,14001,15789,17269,17677,
#Deleted in new
chr17_KI270857v1_alt	1457503	1595129	chr17_KI270857v1_alt:1457503-1595129	0	-	1457503	1457503	8553170	29	325,90,114,114,125,89,101,189,147,135,151,146,82,104,151,164,162,171,210,111,107,99,82,110,139,133,253,47,123,	0,1994,3474,4821,13451,18953,20430,21848,23065,23557,25303,26496,27078,30492,31373,36186,36695,37843,42149,49203,52645,54405,55487,56350,61729,63300,108674,118325,137503,
#Deleted in new
chr17_KI270857v1_alt	1483890	1484665	chr17_KI270857v1_alt:1483890-1484665	0	-	1483890	1483890	8553170	2	255,84,	0,691,
#Deleted in new
chr17_KI270857v1_alt	1510172	1645828	chr17_KI270857v1_alt:1510172-1645828	0	-	1525488	1645454	789624	10	83,99,82,110,139,133,111,253,47,412,	0,1736,2818,3681,9060,10631,15212,56005,65656,135244,
#Deleted in new
chr17_KI270857v1_alt	1513945	1595104	chr17_KI270857v1_alt:1513945-1595104	0	-	1513945	1520929	789624	5	18,139,133,163,98,	0,5287,6858,52232,81061,
#Deleted in new
chr17_KI270857v1_alt	1520803	1645936	chr17_KI270857v1_alt:1520803-1645936	0	-	1525488	1645454	789624	5	133,111,253,47,520,	0,4581,45374,55025,124613,
#Deleted in new
chr17_KI270857v1_alt	1520803	1645936	chr17_KI270857v1_alt:1520803-1645936	0	-	1520803	1566404	789624	8	133,253,47,130,308,118,118,520,	0,45374,55025,60471,80645,82147,84574,124613,
#Deleted in new
chr17_KI270857v1_alt	1520803	1595124	chr17_KI270857v1_alt:1520803-1595124	0	-	1520803	1520929	789624	5	133,111,253,47,118,	0,4581,45374,55025,74203,
#Deleted in new
chr17_KI270857v1_alt	1564648	1566404	chr17_KI270857v1_alt:1564648-1566404	1	-	1564878	1566404	789624	2	342,227,	0,1529,
#Deleted in new
chr17_KI270857v1_alt	1564965	1601574	chr17_KI270857v1_alt:1564965-1601574	0	-	1564965	1566404	789624	4	25,253,47,126,	0,1212,10863,36483,
#Deleted in new
chr17_KI270857v1_alt	1596212	1604735	chr17_KI270857v1_alt:1596212-1604735	0	-	1596212	1596212	8553170	4	187,308,131,29,	0,5236,7387,8494,
#Deleted in new
chr17_KI270857v1_alt	1596240	1645974	chr17_KI270857v1_alt:1596240-1645974	0	-	1596240	1596240	8553170	2	159,558,	0,49176,
#Deleted in new
chr17_KI270857v1_alt	1611992	1628725	chr17_KI270857v1_alt:1611992-1628725	3	+	1612099	1625334	789624	5	165,87,246,117,1060,	0,1889,3147,13253,15673,
#Deleted in new
chr17_KI270857v1_alt	1612049	1628727	chr17_KI270857v1_alt:1612049-1628727	1	+	1612099	1627743	789624	7	108,87,246,117,125,117,1062,	0,1832,3090,9962,12620,13196,15616,
#Deleted in new
chr17_KI270857v1_alt	1622885	1623926	chr17_KI270857v1_alt:1622885-1623926	3	+	1622885	1622885	8553170	2	59,676,	0,365,
#Deleted in new
chr17_KI270857v1_alt	1646029	1718900	chr17_KI270857v1_alt:1646029-1718900	3	+	1650517	1716152	0	16	76,122,107,60,92,158,89,73,64,44,111,72,133,44,74,2934,	0,4391,16644,20084,30874,33641,35700,37833,51661,55217,58570,60593,63539,64233,67696,69937,
#Deleted in new
chr17_KI270857v1_alt	1646041	1677239	chr17_KI270857v1_alt:1646041-1677239	0	+	1646041	1646041	8553170	5	64,122,107,60,336,	0,4379,16632,20072,30862,
#Deleted in new
chr17_KI270857v1_alt	1646041	1681783	chr17_KI270857v1_alt:1646041-1681783	0	+	1650517	1681783	789624	6	64,122,107,60,154,54,	0,4379,16632,20072,33633,35688,
#Deleted in new
chr17_KI270857v1_alt	1646045	1717437	chr17_KI270857v1_alt:1646045-1717437	0	+	1650517	1716152	0	17	60,122,107,60,92,158,89,73,64,44,111,72,133,44,74,694,214,	0,4375,16628,20068,30858,33625,35684,37817,51645,55201,58554,60577,63523,64217,67680,69921,71178,
#Deleted in new
chr17_KI270857v1_alt	1646045	1704640	chr17_KI270857v1_alt:1646045-1704640	0	+	1650517	1676999	789624	11	60,122,107,60,185,158,89,73,64,44,41,	0,4375,16628,20068,30858,33625,35684,37817,51645,55201,58554,
#Deleted in new
chr17_KI270857v1_alt	1646062	1677121	chr17_KI270857v1_alt:1646062-1677121	0	+	1646062	1646062	8553170	4	43,122,107,218,	0,4358,16611,30841,
#Deleted in new
chr17_KI270857v1_alt	1646094	1704822	chr17_KI270857v1_alt:1646094-1704822	1	+	1650517	1704805	0	11	11,122,107,60,92,158,89,73,64,44,223,	0,4326,16579,20019,30809,33576,35635,37768,51596,55152,58505,
#Deleted in new
chr17_KI270857v1_alt	1646375	1716398	chr17_KI270857v1_alt:1646375-1716398	1	+	1650517	1716152	0	16	273,122,107,60,92,158,89,73,64,44,111,72,133,44,74,432,	0,4045,16298,19738,30528,33295,35354,37487,51315,54871,58224,60247,63193,63887,67350,69591,
#Deleted in new
chr17_KI270857v1_alt	1646399	1679745	chr17_KI270857v1_alt:1646399-1679745	0	+	1666170	1679745	789624	5	249,122,60,92,75,	0,4021,19714,30504,33271,
#Deleted in new
chr17_KI270857v1_alt	1646465	1704710	chr17_KI270857v1_alt:1646465-1704710	0	+	1676951	1704710	789624	9	183,19,63,158,89,73,64,44,111,	0,3955,30467,33205,35264,37397,51225,54781,58134,
#Deleted in new
chr17_KI270857v1_alt	1647087	1647746	chr17_KI270857v1_alt:1647087-1647746	3	-	1647087	1647087	8553170	2	65,228,	0,431,
#Deleted in new
chr17_KI270857v1_alt	1662732	1665830	chr17_KI270857v1_alt:1662732-1665830	0	+	1662732	1662732	8553170	2	48,316,	0,2782,
#Deleted in new
chr17_KI270857v1_alt	1675552	1710278	chr17_KI270857v1_alt:1675552-1710278	0	+	1675552	1675552	8553170	11	115,225,154,89,73,64,44,111,72,133,16,	0,1351,4122,6177,8310,22138,25694,29047,31070,34016,34710,
#Deleted in new
chr17_KI270857v1_alt	1676902	1716020	chr17_KI270857v1_alt:1676902-1716020	0	+	1676902	1683864	789624	11	93,158,73,64,44,111,72,133,44,74,54,	0,2768,6960,20788,24344,27697,29720,32666,33360,36823,39064,
#Deleted in new
chr17_KI270857v1_alt	1689731	1716126	chr17_KI270857v1_alt:1689731-1716126	0	+	1689731	1689731	8553170	9	82,64,44,111,72,133,44,74,160,	0,7959,11515,14868,16891,19837,20531,23994,26235,
#Deleted in new
chr17_KI270857v1_alt	1693337	1694098	chr17_KI270857v1_alt:1693337-1694098	7	+	1693337	1693337	16724991	2	122,321,	0,440,
#Deleted in new
chr17_KI270857v1_alt	1700988	1709666	chr17_KI270857v1_alt:1700988-1709666	0	+	1700988	1700988	8553170	4	302,111,72,98,	0,3611,5634,8580,
#Deleted in new
chr17_KI270857v1_alt	1716588	1717612	chr17_KI270857v1_alt:1716588-1717612	0	+	1716588	1716588	8553170	2	147,417,	0,607,
#Deleted in new
chr17_KI270857v1_alt	1729001	1752668	chr17_KI270857v1_alt:1729001-1752668	3	+	1751439	1752036	0	3	128,88,1321,	0,20842,22346,
#Deleted in new
chr17_KI270857v1_alt	1730634	1752654	chr17_KI270857v1_alt:1730634-1752654	1	+	1751439	1752036	0	3	164,88,1307,	0,19209,20713,
#Deleted in new
chr17_KI270857v1_alt	1749045	1752668	chr17_KI270857v1_alt:1749045-1752668	1	+	1751439	1752036	0	2	886,1321,	0,2302,
#Deleted in new
chr17_KI270857v1_alt	1753964	1848609	chr17_KI270857v1_alt:1753964-1848609	1	-	1758107	1848468	0	22	4275,36,111,149,97,54,164,594,945,63,119,134,249,197,78,234,112,106,131,122,41,218,	0,5382,5741,21181,23526,24394,25582,27174,38317,46397,46673,53993,55836,56990,61539,62578,69856,70533,71627,81370,85510,94427,
#Deleted in new
chr17_KI270857v1_alt	1754612	1756510	chr17_KI270857v1_alt:1754612-1756510	0	-	1754612	1754612	8553170	2	124,156,	0,1742,
#Deleted in new
chr17_KI270857v1_alt	1756997	1848524	chr17_KI270857v1_alt:1756997-1848524	1	-	1758107	1848468	0	20	1242,111,149,97,54,164,594,945,63,119,134,249,197,78,112,106,131,122,41,133,	0,2708,18148,20493,21361,22549,24141,35284,43364,43640,50960,52803,53957,58506,66823,67500,68594,78337,82477,91394,
#Deleted in new
chr17_KI270857v1_alt	1757628	1848499	chr17_KI270857v1_alt:1757628-1848499	1	-	1758107	1848468	0	20	611,111,149,97,54,164,459,945,63,119,134,249,197,78,112,106,131,122,41,108,	0,2077,17517,19862,20730,21918,23510,34653,42733,43009,50329,52172,53326,57875,66192,66869,67963,77706,81846,90763,
#Deleted in new
chr17_KI270857v1_alt	1758054	1848494	chr17_KI270857v1_alt:1758054-1848494	1	-	1758107	1848468	0	20	185,36,111,149,97,54,164,459,945,63,119,134,197,78,112,106,131,122,41,103,	0,1292,1651,17091,19436,20304,21492,23084,34227,42307,42583,49903,52900,57449,65766,66443,67537,77280,81420,90337,
#Deleted in new
chr17_KI270857v1_alt	1758054	1848494	chr17_KI270857v1_alt:1758054-1848494	3	-	1758107	1848468	0	22	185,36,111,69,149,97,54,164,594,945,63,119,134,249,197,78,112,106,131,122,41,103,	0,1292,1651,10895,17091,19436,20304,21492,23084,34227,42307,42583,49903,51746,52900,57449,65766,66443,67537,77280,81420,90337,
#Deleted in new
chr17_KI270857v1_alt	1758054	1848494	chr17_KI270857v1_alt:1758054-1848494	1	-	1758107	1848468	0	21	185,36,111,149,97,54,164,594,945,63,119,134,249,197,78,112,106,131,119,41,103,	0,1292,1651,17091,19436,20304,21492,23084,34227,42307,42583,49903,51746,52900,57449,65766,66443,67537,77280,81420,90337,
#Deleted in new
chr17_KI270857v1_alt	1758177	1776645	chr17_KI270857v1_alt:1758177-1776645	0	-	1758177	1758177	8553170	3	62,111,1500,	0,1528,16968,
#Deleted in new
chr17_KI270857v1_alt	1779792	1815643	chr17_KI270857v1_alt:1779792-1815643	0	-	1779792	1779792	8553170	8	1802,945,63,119,134,249,197,140,	0,12489,20569,20845,28165,30008,31162,35711,
#Deleted in new
chr17_KI270857v1_alt	1792582	1818577	chr17_KI270857v1_alt:1792582-1818577	0	-	1792582	1792582	8553170	8	644,63,119,134,249,197,78,285,	0,7779,8055,15375,17218,18372,22921,25710,
#Deleted in new
chr17_KI270857v1_alt	1793153	1808087	chr17_KI270857v1_alt:1793153-1808087	0	-	1793153	1793153	8553170	5	73,64,63,119,130,	0,3153,7208,7484,14804,
#Deleted in new
chr17_KI270857v1_alt	1806015	1840100	chr17_KI270857v1_alt:1806015-1840100	0	-	1806015	1806015	8553170	11	2076,249,197,78,234,303,112,106,131,122,626,	0,3785,4939,9488,10527,12277,17805,18482,19576,29319,33459,
#Deleted in new
chr17_KI270857v1_alt	1810996	1848551	chr17_KI270857v1_alt:1810996-1848551	0	-	1810996	1810996	8553170	10	155,78,167,303,112,106,131,122,41,160,	0,4507,5613,7296,12824,13501,14595,24338,28478,37395,
#Deleted in new
chr17_KI270857v1_alt	1823494	1824586	chr17_KI270857v1_alt:1823494-1824586	0	-	1823698	1824586	789624	2	438,89,	0,1003,
#Deleted in new
chr17_KI270857v1_alt	1824514	1848585	chr17_KI270857v1_alt:1824514-1848585	0	-	1824514	1839511	789624	5	89,131,119,41,105,	0,1077,10820,14960,23966,
#Deleted in new
chr17_KI270857v1_alt	1848851	1860283	chr17_KI270857v1_alt:1848851-1860283	0	-	1853405	1860283	789624	6	420,2244,93,72,76,47,	0,2368,8550,10026,11131,11385,
#Deleted in new
chr17_KI270857v1_alt	1848890	1882558	chr17_KI270857v1_alt:1848890-1882558	3	-	1853405	1882514	0	15	4573,93,72,76,151,123,91,204,73,112,144,186,131,199,131,	0,8511,9987,11092,11346,11617,14564,16115,17008,18779,20234,22317,23492,32313,33537,
#Deleted in new
chr17_KI270857v1_alt	1852222	1882539	chr17_KI270857v1_alt:1852222-1882539	0	-	1878609	1882514	789624	16	1241,93,72,76,151,123,91,204,73,112,144,186,131,115,199,112,	0,5179,6655,7760,8014,8285,11232,12783,13676,15447,16902,18985,20160,26325,28981,30205,
#Deleted in new
chr17_KI270857v1_alt	1852864	1882512	chr17_KI270857v1_alt:1852864-1882512	0	-	1852864	1852864	8553170	13	599,93,1510,123,91,204,73,112,144,186,131,199,85,	0,4537,6013,7643,10590,12141,13034,14805,16260,18343,19518,28339,29563,
#Deleted in new
chr17_KI270857v1_alt	1858877	1882540	chr17_KI270857v1_alt:1858877-1882540	0	-	1874691	1882514	789624	12	72,648,91,204,73,112,144,186,131,54,199,113,	0,1105,4577,6128,7021,8792,10247,12330,13505,15768,22326,23550,
#Deleted in new
chr17_KI270857v1_alt	1863165	1865197	chr17_KI270857v1_alt:1863165-1865197	0	-	1863165	1863165	8553170	2	380,192,	0,1840,
#Deleted in new
chr17_KI270857v1_alt	1865936	1882527	chr17_KI270857v1_alt:1865936-1882527	0	-	1871373	1882514	789624	6	35,112,144,186,199,100,	0,1733,3188,5271,15267,16491,
#Deleted in new
chr17_KI270857v1_alt	1869903	1881865	chr17_KI270857v1_alt:1869903-1881865	0	-	1869903	1869903	8553170	4	1490,131,199,52,	0,2479,11300,11910,
#Deleted in new
chr17_KI270857v1_alt	1925498	1984303	chr17_KI270857v1_alt:1925498-1984303	3	-	1926439	1983940	0	9	962,119,195,133,161,236,265,200,707,	0,12648,14554,18490,24077,45152,47116,52997,58098,
#Deleted in new
chr17_KI270857v1_alt	1926239	1984115	chr17_KI270857v1_alt:1926239-1984115	1	-	1926439	1983940	0	9	221,119,195,133,161,236,187,200,519,	0,11907,13813,17749,23336,44411,46375,52256,57357,
#Deleted in new
chr17_KI270857v1_alt	1926309	1984074	chr17_KI270857v1_alt:1926309-1984074	1	-	1926347	1983940	789624	7	151,133,161,236,187,200,478,	0,17679,23266,44341,46305,52186,57287,
#Deleted in new
chr17_KI270857v1_alt	1926309	1984074	chr17_KI270857v1_alt:1926309-1984074	1	-	1944050	1983940	789624	8	151,195,134,161,236,265,200,478,	0,13743,17679,23266,44341,46305,52186,57287,
#Deleted in new
chr17_KI270857v1_alt	1926309	1984074	chr17_KI270857v1_alt:1926309-1984074	1	-	1926347	1983940	789624	8	151,195,133,161,236,265,200,478,	0,13743,17679,23266,44341,46305,52186,57287,
#Deleted in new
chr17_KI270857v1_alt	1967666	1972875	chr17_KI270857v1_alt:1967666-1972875	0	-	1967666	1967666	8553170	2	3220,261,	0,4948,
#Deleted in new
chr17_KI270857v1_alt	1970716	1984161	chr17_KI270857v1_alt:1970716-1984161	1	-	1970716	1983940	789624	6	169,32,29,108,200,565,	0,1898,1934,1977,7779,12880,
#Deleted in new
chr17_KI270857v1_alt	2037933	2041824	chr17_KI270857v1_alt:2037933-2041824	3	-	2037933	2037933	8553170	3	68,227,183,	0,3203,3708,
#Deleted in new
chr17_KI270857v1_alt	2066989	2093896	chr17_KI270857v1_alt:2066989-2093896	5	-	2066989	2066989	16724991	4	181,262,106,90,	0,398,26097,26817,
#Deleted in new
chr17_KI270857v1_alt	2081637	2123428	chr17_KI270857v1_alt:2081637-2123428	7	-	2081637	2081637	16724991	7	1766,258,106,107,110,55,53,	0,2173,11449,12169,31249,41008,41738,
#Deleted in new
chr17_KI270857v1_alt	2092986	2093912	chr17_KI270857v1_alt:2092986-2093912	5	-	2092986	2092986	16724991	2	206,106,	0,820,
#Deleted in new
chr17_KI270857v1_alt	2146565	2146672	chr17_KI270857v1_alt:2146565-2146672	3	+	2146565	2146565	8553170	1	107,	0,
#Deleted in new
chr17_KI270857v1_alt	2163024	2173974	chr17_KI270857v1_alt:2163024-2173974	3	+	2164609	2173665	789624	14	156,73,86,40,81,108,110,49,121,95,66,100,153,878,	0,1584,1819,3188,3710,4234,4671,6034,6626,7460,7939,8468,8938,10072,
#Deleted in new
chr17_KI270857v1_alt	2216781	2227731	chr17_KI270857v1_alt:2216781-2227731	3	-	2217090	2226146	789624	14	878,153,100,66,95,121,49,110,108,81,40,86,73,156,	0,1859,2382,2945,3395,4203,4867,6169,6608,7159,7722,9045,9293,10794,
#Deleted in new
chr17_KI270857v1_alt	2231007	2292224	chr17_KI270857v1_alt:2231007-2292224	7	-	2231007	2231007	16724991	12	54,105,165,115,34,97,201,108,122,78,85,255,	0,479,1658,5215,6182,6356,6899,9754,13112,23157,46275,60962,
#Deleted in new
chr17_KI270857v1_alt	2266139	2266241	chr17_KI270857v1_alt:2266139-2266241	3	-	2266139	2266139	8553170	1	102,	0,
#Deleted in new
chr17_KI270857v1_alt	2332053	2358165	chr17_KI270857v1_alt:2332053-2358165	3	+	2332214	2357543	789624	7	227,178,118,99,49,174,709,	0,1426,2328,9511,21597,25020,25403,
#Deleted in new
chr17_KI270857v1_alt	2332053	2358166	chr17_KI270857v1_alt:2332053-2358166	1	+	2332214	2357543	0	8	227,178,118,99,49,150,174,710,	0,1426,2328,9511,21597,23513,25020,25403,
#Deleted in new
chr17_KI270857v1_alt	2360557	2378758	chr17_KI270857v1_alt:2360557-2378758	3	-	2361412	2378737	789624	11	5922,147,106,139,239,110,69,236,88,109,815,	0,7641,8323,9094,9423,9981,10466,11368,12023,13807,17386,
#Deleted in new
chr17_KI270857v1_alt	2387175	2434967	chr17_KI270857v1_alt:2387175-2434967	1	+	2387192	2431287	789624	9	805,65,105,131,169,129,136,151,136,	0,9484,12525,14060,15655,25430,43452,43991,47656,
#Deleted in new
chr17_KI270857v1_alt	2387192	2440912	chr17_KI270857v1_alt:2387192-2440912	3	+	2387192	2431287	789624	10	788,65,105,102,131,169,129,136,151,6081,	0,9467,12508,13064,14043,15638,25413,43435,43974,47639,
#Deleted in new
chr17_KI270857v1_alt	2387498	2434952	chr17_KI270857v1_alt:2387498-2434952	0	+	2387498	2387498	8553170	9	482,65,105,726,131,169,123,129,121,	0,9161,12202,12758,13737,15332,23233,25107,47333,
#Deleted in new
chr17_KI270857v1_alt	2387890	2412630	chr17_KI270857v1_alt:2387890-2412630	0	+	2387890	2412630	789624	5	90,65,131,169,25,	0,8769,13345,14940,24715,
#Deleted in new
chr17_KI270857v1_alt	2463727	2547694	chr17_KI270857v1_alt:2463727-2547694	1	+	2463795	2546274	789624	24	131,162,28,96,79,55,1165,156,112,58,144,318,62,131,122,156,79,74,90,126,42,97,32,2449,	0,29684,32487,34425,34697,34907,37746,40723,41103,41426,43442,49158,51015,51332,53601,54102,57641,61681,62041,62986,69365,69994,72177,81518,
#Deleted in new
chr17_KI270857v1_alt	2463795	2545438	chr17_KI270857v1_alt:2463795-2545438	3	+	2463795	2534259	789624	25	63,162,28,96,79,55,1165,156,112,58,144,318,62,131,122,156,79,74,90,126,42,97,23,32,193,	0,29616,32419,34357,34629,34839,37678,40655,41035,41358,43374,49090,50947,51264,53533,54034,57573,61613,61973,62918,69297,69926,70444,72109,81450,
#Deleted in new
chr17_KI270857v1_alt	2485703	2487709	chr17_KI270857v1_alt:2485703-2487709	3	-	2485703	2485703	8553170	4	330,88,202,82,	0,912,1232,1924,
#Deleted in new
chr17_KI270857v1_alt	2485897	2487754	chr17_KI270857v1_alt:2485897-2487754	1	-	2485897	2485897	8553170	4	136,88,131,127,	0,718,1038,1730,
#Deleted in new
chr17_KI270857v1_alt	2485935	2487256	chr17_KI270857v1_alt:2485935-2487256	1	-	2485935	2485935	8553170	2	98,321,	0,1000,
#Deleted in new
chr17_KI270857v1_alt	2486365	2486998	chr17_KI270857v1_alt:2486365-2486998	1	-	2486365	2486365	8553170	2	338,63,	0,570,
#Deleted in new
chr17_KI270857v1_alt	2486470	2487213	chr17_KI270857v1_alt:2486470-2487213	0	-	2486470	2486470	8553170	2	365,278,	0,465,
#Deleted in new
chr17_KI270857v1_alt	2486615	2487673	chr17_KI270857v1_alt:2486615-2487673	0	-	2486615	2486615	8553170	3	220,202,46,	0,320,1012,
#Deleted in new
chr17_KI270857v1_alt	2488999	2493506	chr17_KI270857v1_alt:2488999-2493506	0	+	2488999	2488999	8553170	2	451,95,	0,4412,
#Deleted in new
chr17_KI270857v1_alt	2492709	2501579	chr17_KI270857v1_alt:2492709-2501579	0	+	2498181	2501579	789624	7	443,162,28,96,79,55,106,	0,702,3505,5443,5715,5925,8764,
#Deleted in new
chr17_KI270857v1_alt	2504886	2517450	chr17_KI270857v1_alt:2504886-2517450	0	+	2504886	2513139	789624	8	56,58,144,127,69,62,131,122,	0,267,2283,7999,8248,9856,10173,12442,
#Deleted in new
chr17_KI270857v1_alt	2507245	2517865	chr17_KI270857v1_alt:2507245-2517865	0	+	2507245	2517865	789624	6	68,69,62,131,122,36,	0,5889,7497,7814,10083,10584,
#Deleted in new
chr17_KI270857v1_alt	2517829	2525451	chr17_KI270857v1_alt:2517829-2525451	0	+	2517829	2525081	789624	4	156,79,160,43,	0,3539,7235,7579,
#Deleted in new
chr17_KI270857v1_alt	2525768	2545362	chr17_KI270857v1_alt:2525768-2545362	0	+	2525768	2545362	789624	5	90,126,42,32,117,	0,945,7324,10136,19477,
#Deleted in new
chr17_KI270857v1_alt	2525791	2527051	chr17_KI270857v1_alt:2525791-2527051	0	+	2525791	2525791	8553170	2	67,338,	0,922,
#Deleted in new
chr17_KI270857v1_alt	2533100	2536432	chr17_KI270857v1_alt:2533100-2536432	0	+	2533100	2535966	789624	3	34,97,528,	0,621,2804,
#Deleted in new
chr17_KI270857v1_alt	2535640	2545420	chr17_KI270857v1_alt:2535640-2545420	0	+	2535640	2535640	8553170	2	296,175,	0,9605,
#Deleted in new
chr17_KI270857v1_alt	2565316	2641249	chr17_KI270857v1_alt:2565316-2641249	3	-	2568597	2641024	789624	19	3416,147,153,155,235,247,148,131,176,188,44,93,866,94,199,196,21,302,247,	0,13807,18542,19041,21140,21871,22432,22710,28212,29570,30039,30318,31448,32812,33308,34103,38208,48492,75686,
#Deleted in new
chr17_KI270857v1_alt	2567744	2641161	chr17_KI270857v1_alt:2567744-2641161	1	-	2568597	2641024	789624	20	988,147,153,155,235,247,148,131,176,188,44,93,866,94,199,196,24,99,302,159,	0,11379,16114,16613,18712,19443,20004,20282,25784,27142,27611,27890,29020,30384,30880,31675,35780,42444,46064,73258,
#Deleted in new
chr17_KI270857v1_alt	2576581	2598726	chr17_KI270857v1_alt:2576581-2598726	0	-	2578431	2598726	789624	15	1856,147,153,155,235,247,148,131,176,188,44,93,866,94,102,	0,2542,7277,7776,9875,10606,11167,11445,16947,18305,18774,19053,20183,21547,22043,
#Deleted in new
chr17_KI270857v1_alt	2576584	2608133	chr17_KI270857v1_alt:2576584-2608133	0	-	2576584	2576584	8553170	19	1853,147,123,153,155,235,247,148,131,176,188,44,93,866,94,199,196,24,153,	0,2539,6476,7274,7773,9872,10603,11164,11442,16944,18302,18771,19050,20180,21544,22040,22835,26940,31396,
#Deleted in new
chr17_KI270857v1_alt	2576584	2599298	chr17_KI270857v1_alt:2576584-2599298	0	-	2576584	2576584	8553170	15	1853,147,153,155,235,247,148,131,176,188,44,93,866,94,674,	0,2539,7274,7773,9872,10603,11164,11442,16944,18302,18771,19050,20180,21544,22040,
#Deleted in new
chr17_KI270857v1_alt	2579878	2584003	chr17_KI270857v1_alt:2579878-2584003	0	-	2580109	2584003	789624	3	882,123,145,	0,3182,3980,
#Deleted in new
chr17_KI270857v1_alt	2580568	2582022	chr17_KI270857v1_alt:2580568-2582022	0	-	2580568	2580568	8553170	2	192,261,	0,1193,
#Deleted in new
chr17_KI270857v1_alt	2586980	2594775	chr17_KI270857v1_alt:2586980-2594775	0	-	2586980	2586980	8553170	5	454,148,131,176,407,	0,768,1046,6548,7388,
#Deleted in new
chr17_KI270857v1_alt	2597223	2639931	chr17_KI270857v1_alt:2597223-2639931	0	-	2597223	2639921	789624	7	407,94,199,196,99,302,134,	0,905,1401,2196,12965,16585,42574,
#Deleted in new
chr17_KI270857v1_alt	2636367	2638020	chr17_KI270857v1_alt:2636367-2638020	3	+	2636367	2636367	8553170	2	99,472,	0,1181,
#Deleted in new
chr17_KI270857v1_alt	2707021	2710740	chr17_KI270857v1_alt:2707021-2710740	3	-	2708674	2709814	789624	1	3719,	0,
#Deleted in new
chr17_KI270857v1_alt	2737770	2740066	chr17_KI270857v1_alt:2737770-2740066	3	+	2737770	2737770	8553170	1	2296,	0,
#Deleted in new
chr17_KI270857v1_alt	2740860	2750075	chr17_KI270857v1_alt:2740860-2750075	1	+	2740951	2748430	789624	9	200,80,55,110,104,94,168,99,1804,	0,1408,1944,2221,3631,3940,6305,7149,7411,
#Deleted in new
chr17_KI270857v1_alt	2740860	2765122	chr17_KI270857v1_alt:2740860-2765122	3	+	2740951	2760917	789624	20	200,80,55,110,104,94,168,99,217,615,182,109,67,146,198,89,350,91,357,4247,	0,1408,1944,2221,3631,3940,6305,7149,10070,10825,11890,12303,13975,14208,14830,15117,16336,17136,19078,20015,
#Deleted in new
chr17_KI270857v1_alt	2740938	2751654	chr17_KI270857v1_alt:2740938-2751654	0	+	2740938	2740938	8553170	9	122,80,55,110,104,94,168,99,724,	0,1330,1866,2143,3553,3862,6227,7071,9992,
#Deleted in new
chr17_KI270857v1_alt	2741957	2743118	chr17_KI270857v1_alt:2741957-2743118	0	+	2741957	2741957	8553170	3	391,55,37,	0,847,1124,
#Deleted in new
chr17_KI270857v1_alt	2742269	2743604	chr17_KI270857v1_alt:2742269-2743604	0	+	2742269	2742269	8553170	3	79,55,523,	0,535,812,
#Deleted in new
chr17_KI270857v1_alt	2744398	2750996	chr17_KI270857v1_alt:2744398-2750996	0	+	2744398	2744398	8553170	5	197,94,168,99,66,	0,402,2767,3611,6532,
#Deleted in new
chr17_KI270857v1_alt	2752742	2756475	chr17_KI270857v1_alt:2752742-2756475	0	+	2752742	2756174	789624	6	190,109,67,146,198,498,	0,421,2093,2326,2948,3235,
#Deleted in new
chr17_KI270857v1_alt	2752828	2753586	chr17_KI270857v1_alt:2752828-2753586	0	+	2752828	2752828	8553170	2	104,423,	0,335,
#Deleted in new
chr17_KI270857v1_alt	2753901	2762511	chr17_KI270857v1_alt:2753901-2762511	0	+	2753901	2753901	8553170	8	1001,146,198,89,350,91,357,1636,	0,1167,1789,2076,3295,4095,6037,6974,
#Deleted in new
chr17_KI270857v1_alt	2759574	2762511	chr17_KI270857v1_alt:2759574-2762511	0	+	2759574	2759574	8553170	1	2937,	0,
#Deleted in new
chr17_KI270857v1_alt	2761075	2762490	chr17_KI270857v1_alt:2761075-2762490	0	+	2761075	2761075	8553170	2	104,291,	0,1124,
#Deleted in new
chr17_KI270857v1_alt	2763151	2763517	chr17_KI270857v1_alt:2763151-2763517	3	-	2763151	2763517	789624	1	366,	0,
#Deleted in new
chr17_KI270857v1_alt	2765553	2770340	chr17_KI270857v1_alt:2765553-2770340	3	+	2765677	2768774	0	4	172,36,120,1746,	0,525,1085,3041,
#Deleted in new
chr17_KI270857v1_alt	2765677	2770363	chr17_KI270857v1_alt:2765677-2770363	0	+	2765677	2765677	8553170	3	437,120,1769,	0,961,2917,
#Deleted in new
chr17_KI270857v1_alt	2766425	2769034	chr17_KI270857v1_alt:2766425-2769034	0	+	2766425	2766425	8553170	2	333,440,	0,2169,
#Deleted in new
chr17_KI270857v1_alt	2767120	2767239	chr17_KI270857v1_alt:2767120-2767239	3	-	2767120	2767120	8553170	1	119,	0,
#Deleted in new
chr17_KI270857v1_alt	2769215	2783624	chr17_KI270857v1_alt:2769215-2783624	1	-	2770541	2775721	789624	11	1704,81,96,55,109,51,56,97,152,93,110,	0,2193,4456,4644,4856,5171,5301,5689,6394,13982,14299,
#Deleted in new
chr17_KI270857v1_alt	2769216	2785136	chr17_KI270857v1_alt:2769216-2785136	3	-	2770541	2775721	789624	12	1703,81,96,55,109,51,56,97,152,93,113,456,	0,2192,4455,4643,4855,5170,5300,5688,6393,13981,14298,15464,
#Deleted in new
chr17_KI270857v1_alt	2769218	2770915	chr17_KI270857v1_alt:2769218-2770915	0	-	2769477	2770915	789624	2	354,105,	0,1592,
#Deleted in new
chr17_KI270857v1_alt	2769598	2781947	chr17_KI270857v1_alt:2769598-2781947	1	-	2770541	2775721	789624	10	1321,81,96,55,109,51,56,97,152,161,	0,1810,4073,4261,4473,4788,4918,5306,6011,12188,
#Deleted in new
chr17_KI270857v1_alt	2770362	2783697	chr17_KI270857v1_alt:2770362-2783697	1	-	2770806	2775721	789624	11	557,81,96,55,113,51,56,97,152,93,183,	0,1046,3309,3497,3705,4024,4154,4542,5247,12835,13152,
#Deleted in new
chr17_KI270857v1_alt	2770427	2783503	chr17_KI270857v1_alt:2770427-2783503	1	-	2770806	2775721	789624	10	492,81,96,55,113,51,56,97,152,306,	0,981,3244,3432,3640,3959,4089,4477,5182,12770,
#Deleted in new
chr17_KI270857v1_alt	2770430	2783672	chr17_KI270857v1_alt:2770430-2783672	1	-	2770806	2774951	789624	9	489,81,96,55,113,51,56,97,158,	0,978,3241,3429,3637,3956,4086,4474,13084,
#Deleted in new
chr17_KI270857v1_alt	2784678	2786776	chr17_KI270857v1_alt:2784678-2786776	3	+	2784678	2784678	8553170	1	2098,	0,
#Deleted in new
chr17_KI270857v1_alt	2788054	2799550	chr17_KI270857v1_alt:2788054-2799550	3	+	2788145	2799486	0	6	94,185,108,178,95,113,	0,414,3147,7695,9675,11383,
#Deleted in new
chr17_KI270857v1_alt	2788065	2795899	chr17_KI270857v1_alt:2788065-2795899	0	+	2788474	2795899	789624	4	67,185,108,150,	0,403,3136,7684,
#Deleted in new
chr17_KI270857v1_alt	2788082	2799544	chr17_KI270857v1_alt:2788082-2799544	0	+	2788145	2795854	789624	6	66,185,108,101,95,107,	0,386,3119,7744,9647,11355,
#Deleted in new
chr17_KI270857v1_alt	2788091	2799544	chr17_KI270857v1_alt:2788091-2799544	0	+	2788145	2797772	789624	5	57,185,108,95,107,	0,377,3110,9638,11346,
#Deleted in new
chr17_KI270857v1_alt	2790597	2790719	chr17_KI270857v1_alt:2790597-2790719	3	-	2790597	2790597	8553170	1	122,	0,
#Deleted in new
chr17_KI270857v1_alt	2795703	2799544	chr17_KI270857v1_alt:2795703-2799544	0	+	2795703	2795703	8553170	3	224,95,107,	0,2026,3734,
#Deleted in new
chr17_KI270857v1_alt	2797369	2799544	chr17_KI270857v1_alt:2797369-2799544	0	+	2797369	2797369	8553170	2	455,107,	0,2068,
#Deleted in new
chr17_KI270857v1_alt	2801007	2835224	chr17_KI270857v1_alt:2801007-2835224	3	-	2805009	2834743	0	10	4083,104,259,114,39,147,153,97,98,640,	0,4747,5325,11998,12645,13694,14763,18554,21134,33577,
#Deleted in new
chr17_KI270857v1_alt	2806492	2815249	chr17_KI270857v1_alt:2806492-2815249	0	-	2806492	2806492	8553170	5	99,114,39,147,79,	0,6513,7160,8209,8678,
#Deleted in new
chr17_KI270857v1_alt	2811922	2834841	chr17_KI270857v1_alt:2811922-2834841	0	-	2811922	2811922	8553170	8	22,114,39,147,153,97,98,257,	0,1083,1730,2779,3848,7639,10219,22662,
#Deleted in new
chr17_KI270857v1_alt	2815871	2835445	chr17_KI270857v1_alt:2815871-2835445	0	-	2815871	2822206	789624	5	52,97,98,157,143,	0,3690,6270,12173,19431,
#Deleted in new
chr17_KI270857v1_alt	2835752	2860800	chr17_KI270857v1_alt:2835752-2860800	3	-	2837410	2860502	789624	10	1773,162,99,212,64,128,70,237,173,316,	0,2266,5863,6331,9268,10034,12361,14427,20467,24732,
#Deleted in new
chr17_KI270857v1_alt	2837043	2860634	chr17_KI270857v1_alt:2837043-2860634	0	-	2851044	2860502	789624	11	482,162,99,212,64,128,70,237,117,173,150,	0,975,4572,5040,7977,8743,11070,13136,13900,19176,23441,
#Deleted in new
chr17_KI270857v1_alt	2838133	2851054	chr17_KI270857v1_alt:2838133-2851054	0	-	2851044	2851054	8553170	8	47,99,212,64,320,70,237,111,	0,3482,3950,6887,7461,9980,12046,12810,
#Deleted in new
chr17_KI270857v1_alt	2838158	2845914	chr17_KI270857v1_alt:2838158-2845914	0	-	2845667	2845914	789624	6	22,99,212,64,125,128,	0,3457,3925,6862,7436,7628,
#Deleted in new
chr17_KI270857v1_alt	2841821	2845127	chr17_KI270857v1_alt:2841821-2845127	0	-	2841821	2841821	8553170	2	474,107,	0,3199,
#Deleted in new
chr17_KI270857v1_alt	2842118	2860674	chr17_KI270857v1_alt:2842118-2860674	0	-	2842118	2842118	8553170	7	177,64,320,70,237,173,86,	0,2902,3476,5995,8061,14101,18470,
#Deleted in new
chr17_KI270857v1_alt	2845672	2860625	chr17_KI270857v1_alt:2845672-2860625	0	-	2851044	2860502	789624	6	242,66,237,117,173,141,	0,2441,4507,5271,10547,14812,
#Deleted in new
chr17_KI270857v1_alt	2870406	2876774	chr17_KI270857v1_alt:2870406-2876774	3	-	2870507	2876708	789624	3	259,100,273,	0,2053,6095,
#Deleted in new
chr17_KI270858v1_alt	11820	12761	chr17_KI270858v1_alt:11820-12761	3	+	11820	11820	8553170	2	229,332,	0,609,
#Deleted in new
chr17_KI270858v1_alt	11958	12762	chr17_KI270858v1_alt:11958-12762	0	+	11958	11958	8553170	2	99,333,	0,471,
#Deleted in new
chr17_KI270858v1_alt	36460	36919	chr17_KI270858v1_alt:36460-36919	7	+	36460	36460	16724991	1	459,	0,
#Deleted in new
chr17_KI270859v1_alt	4469	16476	chr17_KI270859v1_alt:4469-16476	3	-	4707	16476	789624	2	321,171,	0,11836,
#Deleted in new
chr17_KI270859v1_alt	5708	6388	chr17_KI270859v1_alt:5708-6388	3	+	5708	5708	8553170	2	259,365,	0,315,
#Deleted in new
chr17_KI270859v1_alt	16265	16476	chr17_KI270859v1_alt:16265-16476	0	-	16265	16265	8553170	1	211,	0,
#Deleted in new
chr17_KI270859v1_alt	16305	16448	chr17_KI270859v1_alt:16305-16448	0	-	16305	16448	789624	1	143,	0,
#Deleted in new
chr17_KI270859v1_alt	16305	16476	chr17_KI270859v1_alt:16305-16476	0	-	16305	16476	789624	1	171,	0,
#Deleted in new
chr17_KI270859v1_alt	16305	16378	chr17_KI270859v1_alt:16305-16378	0	-	16305	16378	789624	1	73,	0,
#Deleted in new
chr17_KI270859v1_alt	16305	16476	chr17_KI270859v1_alt:16305-16476	0	-	16305	16476	789624	1	171,	0,
#Deleted in new
chr17_KI270859v1_alt	16305	16476	chr17_KI270859v1_alt:16305-16476	0	-	16305	16476	789624	1	171,	0,
#Deleted in new
chr17_KI270859v1_alt	16305	16476	chr17_KI270859v1_alt:16305-16476	0	-	16305	16305	8553170	1	171,	0,
#Deleted in new
chr17_KI270859v1_alt	16305	16476	chr17_KI270859v1_alt:16305-16476	0	-	16305	16476	789624	1	171,	0,
#Deleted in new
chr17_KI270859v1_alt	16305	16476	chr17_KI270859v1_alt:16305-16476	0	-	16305	16476	789624	1	171,	0,
#Deleted in new
chr17_KI270859v1_alt	16457	16476	chr17_KI270859v1_alt:16457-16476	0	-	16457	16476	8553170	1	19,	0,
#Deleted in new
chr17_KI270860v1_alt	4590	24134	chr17_KI270860v1_alt:4590-24134	3	-	9002	24010	789624	4	4732,60,386,294,	0,5761,13914,19250,
#Deleted in new
chr17_KI270860v1_alt	8730	9329	chr17_KI270860v1_alt:8730-9329	0	-	8730	8730	8553170	2	371,174,	0,425,
#Deleted in new
chr17_KI270860v1_alt	8733	19755	chr17_KI270860v1_alt:8733-19755	1	-	9002	18814	789624	3	589,60,1251,	0,1618,9771,
#Deleted in new
chr17_KI270860v1_alt	8832	23627	chr17_KI270860v1_alt:8832-23627	1	-	9002	18814	789624	4	490,60,386,31,	0,1519,9672,14764,
#Deleted in new
chr17_KI270860v1_alt	51110	157634	chr17_KI270860v1_alt:51110-157634	3	+	51124	154492	789624	13	74,117,100,65,66,96,96,125,136,69,75,105,259,	0,3043,3258,16265,36405,45522,84601,89112,92790,93035,93515,103301,106265,
#Deleted in new
chr17_KI270860v1_alt	51111	71814	chr17_KI270860v1_alt:51111-71814	0	+	51124	54391	789624	5	73,79,100,65,142,	0,3042,3257,16264,20561,
#Deleted in new
chr17_KI270860v1_alt	53772	157634	chr17_KI270860v1_alt:53772-157634	1	+	96193	154492	789624	13	498,100,65,66,97,96,96,125,136,69,75,105,259,	0,596,13603,33743,42399,42860,81939,86450,90128,90373,90853,100639,103603,
#Deleted in new
chr17_KI270860v1_alt	53798	141028	chr17_KI270860v1_alt:53798-141028	0	+	53798	53798	8553170	9	105,117,100,65,66,96,96,125,111,	0,355,570,13577,33717,42834,81913,86424,87119,
#Deleted in new
chr17_KI270860v1_alt	54154	90415	chr17_KI270860v1_alt:54154-90415	0	+	54154	54154	8553170	5	116,100,65,66,76,	0,214,13221,33361,36185,
#Deleted in new
chr17_KI270860v1_alt	94854	159270	chr17_KI270860v1_alt:94854-159270	0	+	135741	154492	789624	10	1008,96,96,125,136,69,75,105,228,508,	0,1778,40857,45368,49046,49291,49771,59557,62521,63908,
#Deleted in new
chr17_KI270860v1_alt	119719	120376	chr17_KI270860v1_alt:119719-120376	1	-	119719	119719	8553170	2	280,121,	0,536,
#Deleted in new
chr17_KI270860v1_alt	119719	122102	chr17_KI270860v1_alt:119719-122102	0	-	119719	119719	8553170	2	280,47,	0,2336,
#Deleted in new
chr17_KI270860v1_alt	119723	122737	chr17_KI270860v1_alt:119723-122737	0	-	119723	119723	8553170	2	276,104,	0,2910,
#Deleted in new
chr17_KI270860v1_alt	119949	122933	chr17_KI270860v1_alt:119949-122933	3	-	119949	119949	8553170	3	50,105,75,	0,2684,2909,
#Deleted in new
chr17_KI270860v1_alt	140071	154501	chr17_KI270860v1_alt:140071-154501	0	+	140071	140071	8553170	6	276,128,136,69,75,90,	0,846,3829,4074,4554,14340,
#Deleted in new
chr17_KI270860v1_alt	144593	157634	chr17_KI270860v1_alt:144593-157634	0	+	144593	144593	8553170	3	107,105,259,	0,9818,12782,
#Deleted in new
chr17_KI270860v1_alt	151446	157629	chr17_KI270860v1_alt:151446-157629	0	+	151446	151446	8553170	2	3070,254,	0,5929,
#Deleted in new
chr17_KI270860v1_alt	154435	157634	chr17_KI270860v1_alt:154435-157634	0	+	154435	154435	8553170	2	81,259,	0,2940,
#Deleted in new
chr17_KI270860v1_alt	155502	177989	chr17_KI270860v1_alt:155502-177989	0	-	158961	177989	789624	14	3474,85,110,88,90,78,122,139,159,84,138,92,119,82,	0,4442,6450,7994,8770,13403,15495,16638,16867,18150,18815,19647,21081,22405,
#Deleted in new
chr17_KI270860v1_alt	157375	158960	chr17_KI270860v1_alt:157375-158960	0	+	157375	157375	8553170	2	228,218,	0,1367,
#Deleted in new
chr17_KI270860v1_alt	158715	177989	chr17_KI270860v1_alt:158715-177989	3	-	158961	177989	789624	15	261,85,110,88,114,90,78,122,139,159,84,138,92,119,82,	0,1229,3237,4781,4958,5557,10190,12282,13425,13654,14937,15602,16434,17868,19192,
#Deleted in new
chr17_KI270860v1_alt	158720	172216	chr17_KI270860v1_alt:158720-172216	0	-	158720	158720	8553170	7	256,85,110,88,90,78,1219,	0,1224,3232,4776,5552,10185,12277,
#Deleted in new
chr17_KI270860v1_alt	158720	164063	chr17_KI270860v1_alt:158720-164063	0	-	158720	158720	8553170	5	256,85,110,88,390,	0,1224,3232,4776,4953,
#Deleted in new
chr17_KI270860v1_alt	158720	164417	chr17_KI270860v1_alt:158720-164417	0	-	158720	158720	8553170	5	256,85,110,88,145,	0,1224,3232,4776,5552,
#Deleted in new
chr17_KI270860v1_alt	158720	162387	chr17_KI270860v1_alt:158720-162387	0	-	158720	158720	8553170	3	256,85,435,	0,1224,3232,
#Deleted in new
chr17_KI270860v1_alt	158722	162028	chr17_KI270860v1_alt:158722-162028	0	-	159899	162028	789624	2	1307,76,	0,3230,
#Deleted in new
chr17_KI270860v1_alt	158765	172503	chr17_KI270860v1_alt:158765-172503	0	-	158961	172503	789624	8	211,85,110,88,90,122,139,134,	0,1179,3187,4731,5507,12232,13375,13604,
#Deleted in new
chr17_KI270860v1_alt	158853	169692	chr17_KI270860v1_alt:158853-169692	0	-	158853	158853	8553170	7	123,85,110,88,90,78,191,	0,1091,3099,4643,5419,10052,10648,
#Deleted in new
chr17_KI270860v1_alt	159994	171183	chr17_KI270860v1_alt:159994-171183	0	-	159994	159994	8553170	6	35,110,88,90,198,186,	0,1958,3502,4278,8791,11003,
#Deleted in new
chr17_KI270860v1_alt	163785	168954	chr17_KI270860v1_alt:163785-168954	0	-	163785	163785	8553170	2	577,49,	0,5120,
#Deleted in new
chr17_KI270860v1_alt	171849	177989	chr17_KI270860v1_alt:171849-177989	0	-	171849	171849	8553170	7	430,159,84,138,92,119,82,	0,520,1803,2468,3300,4734,6058,
#Deleted in new
chr17_KI270860v1_alt	172381	174775	chr17_KI270860v1_alt:172381-174775	0	-	172381	172381	8553170	3	147,84,458,	0,1271,1936,
#Deleted in new
chr17_KI270860v1_alt	172508	177989	chr17_KI270860v1_alt:172508-177989	0	-	172508	172508	8553170	6	20,84,138,92,119,82,	0,1144,1809,2641,4075,5399,
#Deleted in new
chr17_KI270860v1_alt	174329	177989	chr17_KI270860v1_alt:174329-177989	0	-	174329	174329	8553170	4	126,92,119,82,	0,820,2254,3578,
#Deleted in new
chr17_KI270860v1_alt	174427	177989	chr17_KI270860v1_alt:174427-177989	0	-	174427	174427	8553170	4	28,92,119,82,	0,722,2156,3480,
#Deleted in new
chr17_KI270860v1_alt	175164	177989	chr17_KI270860v1_alt:175164-177989	0	-	175164	177989	789624	3	77,119,82,	0,1419,2743,
#Deleted in new
chr17_KI270860v1_alt	175201	177989	chr17_KI270860v1_alt:175201-177989	0	-	175201	177989	789624	3	40,119,82,	0,1382,2706,
#Deleted in new
chr17_KI270860v1_alt	176584	177989	chr17_KI270860v1_alt:176584-177989	0	-	176584	177989	789624	2	118,82,	0,1323,
#Deleted in new
chr17_KI270861v1_alt	0	58864	chr17_KI270861v1_alt:0-58864	3	-	5631	57902	789624	14	5793,124,74,133,139,147,203,134,93,77,56,208,206,43,	0,6624,8277,13231,15940,20829,21296,21593,23214,43222,45006,46589,57742,58821,
#Deleted in new
chr17_KI270861v1_alt	4399	58369	chr17_KI270861v1_alt:4399-58369	1	-	5631	57902	789624	15	1394,124,74,133,139,12,147,203,134,93,77,56,208,206,261,	0,2225,3878,8832,11541,12577,16430,16897,17194,18815,38823,40607,42190,53343,53709,
#Deleted in new
chr17_KI270861v1_alt	4431	58864	chr17_KI270861v1_alt:4431-58864	1	-	5631	57902	789624	15	1362,124,74,133,139,12,147,203,134,93,77,56,208,206,43,	0,2193,3846,8800,11509,12545,16398,16865,17162,18783,38791,40575,42158,53311,54390,
#Deleted in new
chr17_KI270861v1_alt	5528	35113	chr17_KI270861v1_alt:5528-35113	1	-	5631	34857	789624	10	265,124,74,133,139,147,203,134,93,346,	0,1096,2749,7703,10412,15301,15768,16065,17686,29239,
#Deleted in new
chr17_KI270861v1_alt	6630	8733	chr17_KI270861v1_alt:6630-8733	0	-	6630	6630	8553170	2	118,456,	0,1647,
#Deleted in new
chr17_KI270861v1_alt	8281	13726	chr17_KI270861v1_alt:8281-13726	0	-	8281	8281	8553170	2	70,495,	0,4950,
#Deleted in new
chr17_KI270861v1_alt	15266	58278	chr17_KI270861v1_alt:15266-58278	0	-	15266	15266	8553170	10	813,147,203,134,93,77,56,208,206,137,	0,5563,6030,6327,7948,27956,29740,31323,42476,42875,
#Deleted in new
chr17_KI270861v1_alt	15266	58914	chr17_KI270861v1_alt:15266-58914	0	-	15266	15266	8553170	10	813,147,203,134,93,77,56,208,206,93,	0,5563,6030,6327,7948,27956,29740,31323,42476,43555,
#Deleted in new
chr17_KI270861v1_alt	20877	58868	chr17_KI270861v1_alt:20877-58868	0	-	45033	57902	789624	8	99,203,134,93,77,56,206,47,	0,419,716,2337,22345,24129,36865,37944,
#Deleted in new
chr17_KI270861v1_alt	20934	35304	chr17_KI270861v1_alt:20934-35304	0	-	20934	20934	8553170	5	42,203,134,93,84,	0,362,659,2280,14286,
#Deleted in new
chr17_KI270861v1_alt	21467	34972	chr17_KI270861v1_alt:21467-34972	0	-	33154	34857	789624	5	32,134,93,103,205,	0,126,1747,11665,13300,
#Deleted in new
chr17_KI270861v1_alt	21649	57939	chr17_KI270861v1_alt:21649-57939	0	-	45014	57902	789624	7	78,93,77,56,69,53,197,	0,1565,21573,23357,24940,25095,36093,
#Deleted in new
chr17_KI270861v1_alt	34401	34700	chr17_KI270861v1_alt:34401-34700	3	-	34401	34401	8553170	1	299,	0,
#Deleted in new
chr17_KI270861v1_alt	46393	57827	chr17_KI270861v1_alt:46393-57827	0	-	46393	46393	8553170	2	404,85,	0,11349,
#Deleted in new
chr17_KI270861v1_alt	63885	75775	chr17_KI270861v1_alt:63885-75775	3	-	64785	75725	789624	11	1760,147,122,121,104,129,219,526,102,62,151,	0,2851,3083,4948,5781,6054,6590,9584,10976,11320,11739,
#Deleted in new
chr17_KI270861v1_alt	63892	75751	chr17_KI270861v1_alt:63892-75751	0	-	69979	75725	789624	11	1753,147,122,121,104,59,219,526,102,62,127,	0,2844,3076,4941,5774,6047,6583,9577,10969,11313,11732,
#Deleted in new
chr17_KI270861v1_alt	64417	75741	chr17_KI270861v1_alt:64417-75741	1	-	64785	75725	789624	9	1228,147,122,125,190,526,102,62,117,	0,2319,2551,4416,6087,9052,10444,10788,11207,
#Deleted in new
chr17_KI270861v1_alt	64417	75772	chr17_KI270861v1_alt:64417-75772	1	-	65531	75725	789624	11	1228,110,122,121,104,129,219,526,102,62,148,	0,2319,2551,4416,5249,5522,6058,9052,10444,10788,11207,
#Deleted in new
chr17_KI270861v1_alt	64417	75749	chr17_KI270861v1_alt:64417-75749	0	-	64417	64417	8553170	10	1228,147,122,121,104,755,526,102,62,125,	0,2319,2551,4416,5249,5522,9052,10444,10788,11207,
#Deleted in new
chr17_KI270861v1_alt	64632	75740	chr17_KI270861v1_alt:64632-75740	0	-	75255	75725	789624	11	1013,147,122,121,104,129,219,526,102,62,153,	0,2104,2336,4201,5034,5307,5843,8837,10229,10573,10955,
#Deleted in new
chr17_KI270861v1_alt	68167	70585	chr17_KI270861v1_alt:68167-70585	0	-	68167	68167	8553170	4	787,104,59,110,	0,1499,1772,2308,
#Deleted in new
chr17_KI270861v1_alt	70608	74547	chr17_KI270861v1_alt:70608-74547	0	-	70608	70608	8553170	3	86,526,282,	0,2861,3657,
#Deleted in new
chr17_KI270861v1_alt	73347	75751	chr17_KI270861v1_alt:73347-75751	0	-	73347	73347	8553170	4	648,102,62,127,	0,1514,1858,2277,
#Deleted in new
chr17_KI270861v1_alt	76172	79060	chr17_KI270861v1_alt:76172-79060	0	-	76469	79060	789624	4	475,123,146,234,	0,1690,2205,2654,
#Deleted in new
chr17_KI270861v1_alt	76177	80105	chr17_KI270861v1_alt:76177-80105	3	-	76469	79832	0	8	470,84,123,146,246,107,94,501,	0,756,1685,2200,2649,3050,3262,3427,
#Deleted in new
chr17_KI270861v1_alt	76220	78874	chr17_KI270861v1_alt:76220-78874	0	-	76220	76220	8553170	4	427,84,123,497,	0,713,1642,2157,
#Deleted in new
chr17_KI270861v1_alt	76527	79096	chr17_KI270861v1_alt:76527-79096	0	-	76527	76527	8553170	4	120,123,146,270,	0,1335,1850,2299,
#Deleted in new
chr17_KI270861v1_alt	80656	114910	chr17_KI270861v1_alt:80656-114910	3	-	80829	114599	0	43	328,203,140,141,142,240,194,174,114,129,238,192,161,147,130,170,136,180,248,117,211,147,239,188,193,127,164,207,197,130,135,120,190,120,191,106,126,213,219,165,169,111,103,	0,479,785,1019,2913,3148,4721,5763,6019,7624,7897,8728,9212,9803,10069,10364,10642,10982,11277,22452,22728,23117,23813,24523,24991,25299,25578,25876,26347,26936,27889,28133,28388,28662,28980,30097,30300,30849,31191,31500,32904,33843,34151,
#Deleted in new
chr17_KI270861v1_alt	80658	114865	chr17_KI270861v1_alt:80658-114865	1	-	80829	114599	0	42	326,203,140,141,142,240,194,174,114,129,238,192,161,147,130,170,136,180,248,117,211,147,239,188,193,127,164,207,197,130,135,120,190,120,191,106,126,213,219,165,169,366,	0,477,783,1017,2911,3146,4719,5761,6017,7622,7895,8726,9210,9801,10067,10362,10640,10980,11275,22450,22726,23115,23811,24521,24989,25297,25576,25874,26345,26934,27887,28131,28386,28660,28978,30095,30298,30847,31189,31498,32902,33841,
#Deleted in new
chr17_KI270861v1_alt	80867	82174	chr17_KI270861v1_alt:80867-82174	0	-	80867	80867	8553170	4	117,203,140,499,	0,268,574,808,
#Deleted in new
chr17_KI270861v1_alt	81690	83939	chr17_KI270861v1_alt:81690-83939	0	-	81690	81690	8553170	4	126,57,142,135,	0,318,1879,2114,
#Deleted in new
chr17_KI270861v1_alt	82758	85008	chr17_KI270861v1_alt:82758-85008	0	-	82758	82758	8553170	2	953,1204,	0,1046,
#Deleted in new
chr17_KI270861v1_alt	89491	91357	chr17_KI270861v1_alt:89491-91357	0	-	89491	89491	8553170	5	538,147,130,170,59,	0,968,1234,1529,1807,
#Deleted in new
chr17_KI270861v1_alt	90954	91806	chr17_KI270861v1_alt:90954-91806	0	-	90954	90954	8553170	2	480,168,	0,684,
#Deleted in new
chr17_KI270861v1_alt	102968	103437	chr17_KI270861v1_alt:102968-103437	0	-	102968	102968	8553170	2	257,53,	0,416,
#Deleted in new
chr17_KI270861v1_alt	104565	114835	chr17_KI270861v1_alt:104565-114835	0	-	104565	114599	789624	19	143,188,193,127,164,207,197,130,135,120,190,120,191,106,126,213,219,169,336,	0,614,1082,1390,1669,1967,2438,3027,3980,4224,4479,4753,5071,6188,6391,6940,7282,8995,9934,
#Deleted in new
chr17_KI270861v1_alt	104671	105558	chr17_KI270861v1_alt:104671-105558	0	-	104671	104671	8553170	2	37,379,	0,508,
#Deleted in new
chr17_KI270861v1_alt	106335	107299	chr17_KI270861v1_alt:106335-107299	0	-	106335	106335	8553170	3	63,207,296,	0,197,668,
#Deleted in new
chr17_KI270861v1_alt	108468	109338	chr17_KI270861v1_alt:108468-109338	0	-	108468	108468	8553170	4	212,120,190,20,	0,321,576,850,
#Deleted in new
chr17_KI270861v1_alt	110508	111071	chr17_KI270861v1_alt:110508-111071	0	-	110508	110508	8553170	2	351,115,	0,448,
#Deleted in new
chr17_KI270861v1_alt	113048	114880	chr17_KI270861v1_alt:113048-114880	0	-	113048	113048	8553170	3	681,111,73,	0,1451,1759,
#Deleted in new
chr17_KI270861v1_alt	132817	140466	chr17_KI270861v1_alt:132817-140466	3	-	137797	140270	789624	4	5433,83,83,372,	0,6709,7014,7277,
#Deleted in new
chr17_KI270861v1_alt	141520	146238	chr17_KI270861v1_alt:141520-146238	1	-	141520	141520	789624	4	907,312,83,81,	0,2210,2878,4637,
#Deleted in new
chr17_KI270861v1_alt	141538	146279	chr17_KI270861v1_alt:141538-146279	3	-	141538	141538	789624	2	2504,122,	0,4619,
#Deleted in new
chr17_KI270861v1_alt	141998	146240	chr17_KI270861v1_alt:141998-146240	0	-	141998	141998	8553170	4	429,159,83,83,	0,1885,2400,4159,
#Deleted in new
chr17_KI270861v1_alt	142119	146225	chr17_KI270861v1_alt:142119-146225	0	-	142119	142119	8553170	3	308,159,68,	0,1764,4038,
#Deleted in new
chr17_KI270861v1_alt	142278	146369	chr17_KI270861v1_alt:142278-146369	1	-	142278	142278	8553170	3	396,159,212,	0,1605,3879,
#Deleted in new
chr17_KI270861v1_alt	142296	146239	chr17_KI270861v1_alt:142296-146239	0	-	142296	142296	8553170	3	131,312,82,	0,1434,3861,
#Deleted in new
chr17_KI270861v1_alt	142388	146239	chr17_KI270861v1_alt:142388-146239	1	-	142388	142388	8553170	4	544,190,83,82,	0,1495,2010,3769,
#Deleted in new
chr17_KI270861v1_alt	142607	146238	chr17_KI270861v1_alt:142607-146238	0	-	142607	142607	8553170	4	325,159,83,81,	0,1276,1791,3550,
#Deleted in new
chr17_KI270861v1_alt	142690	146236	chr17_KI270861v1_alt:142690-146236	0	-	142690	142690	8553170	3	233,312,79,	0,1040,3467,
#Deleted in new
chr17_KI270861v1_alt	142707	146238	chr17_KI270861v1_alt:142707-146238	0	-	142707	142707	8553170	3	225,159,81,	0,1176,3450,
#Deleted in new
chr17_KI270861v1_alt	142741	146238	chr17_KI270861v1_alt:142741-146238	0	-	142741	142741	8553170	3	191,312,81,	0,989,3416,
#Deleted in new
chr17_KI270861v1_alt	142794	146236	chr17_KI270861v1_alt:142794-146236	0	-	142794	142794	8553170	4	129,159,83,79,	0,1089,1604,3363,
#Deleted in new
chr17_KI270861v1_alt	142797	146239	chr17_KI270861v1_alt:142797-146239	0	-	142797	142797	8553170	4	286,159,83,82,	0,1086,1601,3360,
#Deleted in new
chr17_KI270861v1_alt	142819	146236	chr17_KI270861v1_alt:142819-146236	0	-	142819	142819	8553170	4	104,312,83,79,	0,911,1579,3338,
#Deleted in new
chr17_KI270861v1_alt	142852	146237	chr17_KI270861v1_alt:142852-146237	0	-	142852	142852	8553170	4	80,312,83,80,	0,878,1546,3305,
#Deleted in new
chr17_KI270861v1_alt	142906	146238	chr17_KI270861v1_alt:142906-146238	0	-	142906	142906	8553170	3	177,312,81,	0,824,3251,
#Deleted in new
chr17_KI270861v1_alt	142910	146275	chr17_KI270861v1_alt:142910-146275	0	-	142910	142910	8553170	4	43,312,83,118,	0,820,1488,3247,
#Deleted in new
chr17_KI270861v1_alt	143002	146238	chr17_KI270861v1_alt:143002-146238	0	-	143002	143002	8553170	4	81,312,83,81,	0,728,1396,3155,
#Deleted in new
chr17_KI270861v1_alt	143475	147202	chr17_KI270861v1_alt:143475-147202	1	-	143475	143475	8553170	4	567,83,143,138,	0,923,2682,3589,
#Deleted in new
chr17_KI270861v1_alt	146550	168638	chr17_KI270861v1_alt:146550-168638	3	+	146603	167724	789624	10	111,108,191,191,166,166,690,146,180,1235,	0,13865,14240,14553,15814,16155,17016,19060,19527,20853,
#Deleted in new
chr17_KI270861v1_alt	146550	163685	chr17_KI270861v1_alt:146550-163685	0	+	146599	163685	789624	4	111,166,166,119,	0,15814,16155,17016,
#Deleted in new
chr17_KI270861v1_alt	146550	161263	chr17_KI270861v1_alt:146550-161263	0	+	146603	161263	789624	4	111,108,191,160,	0,13865,14240,14553,
#Deleted in new
chr17_KI270861v1_alt	146563	168638	chr17_KI270861v1_alt:146563-168638	1	+	158145	167724	789624	11	98,634,108,191,191,166,166,690,146,180,1235,	0,11462,13852,14227,14540,15801,16142,17003,19047,19514,20840,
#Deleted in new
chr17_KI270861v1_alt	146574	160873	chr17_KI270861v1_alt:146574-160873	0	+	146574	146574	8553170	2	87,458,	0,13841,
#Deleted in new
chr17_KI270861v1_alt	146628	168527	chr17_KI270861v1_alt:146628-168527	1	+	161220	167724	789624	9	114,191,191,166,166,690,146,180,1124,	0,14162,14475,15736,16077,16938,18982,19449,20775,
#Deleted in new
chr17_KI270861v1_alt	154575	168633	chr17_KI270861v1_alt:154575-168633	1	+	160429	167724	789624	10	247,108,191,191,166,166,690,146,180,1230,	0,5840,6215,6528,7789,8130,8991,11035,11502,12828,
#Deleted in new
chr17_KI270861v1_alt	154725	163719	chr17_KI270861v1_alt:154725-163719	0	+	162452	163719	789624	4	97,166,166,153,	0,7639,7980,8841,
#Deleted in new
chr17_KI270861v1_alt	154995	168631	chr17_KI270861v1_alt:154995-168631	1	+	154995	167724	789624	10	3664,108,191,191,166,166,690,146,180,1228,	0,5420,5795,6108,7369,7710,8571,10615,11082,12408,
#Deleted in new
chr17_KI270861v1_alt	157609	168623	chr17_KI270861v1_alt:157609-168623	0	+	157609	157609	8553170	9	1050,108,191,191,166,166,690,647,1220,	0,2806,3181,3494,4755,5096,5957,8001,9794,
#Deleted in new
chr17_KI270861v1_alt	158242	160963	chr17_KI270861v1_alt:158242-160963	0	+	158242	160963	789624	2	417,173,	0,2548,
#Deleted in new
chr17_KI270861v1_alt	160496	163577	chr17_KI270861v1_alt:160496-163577	0	+	160496	162517	789624	5	27,191,166,166,11,	0,294,1868,2209,3070,
#Deleted in new
chr17_KI270861v1_alt	160506	161249	chr17_KI270861v1_alt:160506-161249	0	+	160506	160506	8553170	2	475,146,	0,597,
#Deleted in new
chr17_KI270861v1_alt	161219	163017	chr17_KI270861v1_alt:161219-163017	0	+	161219	161219	8553170	3	75,166,312,	0,1145,1486,
#Deleted in new
chr17_KI270861v1_alt	171787	184214	chr17_KI270861v1_alt:171787-184214	3	+	173947	183483	789624	10	73,67,39,63,202,144,204,143,205,1144,	0,2156,2339,2497,2872,4182,4472,5759,9747,11283,
#Deleted in new
chr17_KI270861v1_alt	171787	177596	chr17_KI270861v1_alt:171787-177596	0	+	173947	177596	789624	8	73,67,39,63,202,144,204,50,	0,2156,2339,2497,2872,4182,4472,5759,
#Deleted in new
chr17_KI270861v1_alt	171794	183591	chr17_KI270861v1_alt:171794-183591	1	+	173947	183483	789624	9	66,67,39,73,144,204,143,205,521,	0,2149,2332,2490,4175,4465,5752,9740,11276,
#Deleted in new
chr17_KI270861v1_alt	171820	183149	chr17_KI270861v1_alt:171820-183149	0	+	173947	183149	789624	8	40,67,39,63,202,143,205,79,	0,2123,2306,2464,2839,5726,9714,11250,
#Deleted in new
chr17_KI270861v1_alt	171977	184217	chr17_KI270861v1_alt:171977-184217	1	+	173947	183483	789624	10	51,67,39,63,202,144,204,143,205,1147,	0,1966,2149,2307,2682,3992,4282,5569,9557,11093,
#Deleted in new
chr17_KI270861v1_alt	190907	195943	chr17_KI270861v1_alt:190907-195943	0	+	195859	195943	789624	2	155,92,	0,4944,
#Deleted in new
chr17_KI270861v1_alt	191060	195943	chr17_KI270861v1_alt:191060-195943	0	+	191185	195943	789624	2	162,92,	0,4791,
#Deleted in new
chr17_KI270861v1_alt	191777	195943	chr17_KI270861v1_alt:191777-195943	0	+	195859	195943	789624	2	55,92,	0,4074,
#Deleted in new
chr17_KI270861v1_alt	195222	195943	chr17_KI270861v1_alt:195222-195943	3	+	195859	195943	789624	2	388,92,	0,629,
#Deleted in new
chr17_KI270862v1_alt	17545	18709	chr17_KI270862v1_alt:17545-18709	0	-	17545	17545	8553170	2	332,144,	0,1020,
#Deleted in new
chr17_KI270862v1_alt	18565	18596	chr17_KI270862v1_alt:18565-18596	0	-	18565	18565	8553170	1	31,	0,
#Deleted in new
chr17_KI270862v1_alt	18565	19017	chr17_KI270862v1_alt:18565-19017	3	-	18565	18925	789624	1	452,	0,
#Deleted in new
chr17_KI270862v1_alt	36363	42918	chr17_KI270862v1_alt:36363-42918	3	+	36389	40335	789624	4	264,197,73,2660,	0,1662,2395,3895,
#Deleted in new
chr17_KI270862v1_alt	42765	224346	chr17_KI270862v1_alt:42765-224346	1	-	45326	224199	789624	23	2651,148,106,135,140,110,60,132,98,75,105,76,123,166,122,141,53,61,108,186,99,185,208,	0,3646,6160,7210,8327,9169,9586,46497,46984,51810,52773,53705,54482,67581,70471,73396,74407,80111,84301,92446,101418,126495,181373,
#Deleted in new
chr17_KI270862v1_alt	42773	231794	chr17_KI270862v1_alt:42773-231794	1	-	45326	169368	789624	23	2643,148,106,135,140,110,60,132,98,75,105,76,123,166,122,141,53,61,108,186,99,185,523,	0,3638,6152,7202,8319,9161,9578,46489,46976,51802,52765,53697,54474,67573,70463,73388,74399,80103,84293,92438,101410,126487,188498,
#Deleted in new
chr17_KI270862v1_alt	42773	51836	chr17_KI270862v1_alt:42773-51836	0	-	42773	42773	8553170	5	2643,148,106,135,744,	0,3638,6152,7202,8319,
#Deleted in new
chr17_KI270862v1_alt	44256	71049	chr17_KI270862v1_alt:44256-71049	1	-	44296	70988	789624	5	139,49,110,60,205,	0,6927,7678,8095,26588,
#Deleted in new
chr17_KI270862v1_alt	44981	51167	chr17_KI270862v1_alt:44981-51167	0	-	45256	51167	789624	5	386,148,106,135,75,	0,1430,3944,4994,6111,
#Deleted in new
chr17_KI270862v1_alt	45037	122693	chr17_KI270862v1_alt:45037-122693	1	-	45326	122406	789624	18	379,148,106,135,140,110,60,132,98,75,105,76,123,166,122,141,53,333,	0,1374,3888,4938,6055,6897,7314,44225,44712,49538,50501,51433,52210,65309,68199,71124,72135,77323,
#Deleted in new
chr17_KI270862v1_alt	45037	169833	chr17_KI270862v1_alt:45037-169833	1	-	45326	169368	789624	22	379,148,106,135,140,110,60,132,98,75,105,76,123,166,122,141,53,61,108,186,99,573,	0,1374,3888,4938,6055,6897,7314,44225,44712,49538,50501,51433,52210,65309,68199,71124,72135,77839,82029,90174,99146,124223,
#Deleted in new
chr17_KI270862v1_alt	45154	152647	chr17_KI270862v1_alt:45154-152647	1	-	45326	152615	789624	22	262,148,106,135,140,110,60,132,98,75,105,76,123,166,122,141,53,61,108,186,99,167,	0,1257,3771,4821,5938,6780,7197,44108,44595,49421,50384,51316,52093,65192,68082,71007,72018,77722,81912,90057,99029,107326,
#Deleted in new
chr17_KI270862v1_alt	45307	71085	chr17_KI270862v1_alt:45307-71085	1	-	45326	70988	789624	8	109,148,106,135,140,110,60,241,	0,1104,3618,4668,5785,6627,7044,25537,
#Deleted in new
chr17_KI270862v1_alt	45364	50635	chr17_KI270862v1_alt:45364-50635	0	-	45364	45364	8553170	5	52,148,106,135,244,	0,1047,3561,4611,5027,
#Deleted in new
chr17_KI270862v1_alt	46484	50043	chr17_KI270862v1_alt:46484-50043	0	-	46484	46484	8553170	3	75,106,372,	0,2441,3187,
#Deleted in new
chr17_KI270862v1_alt	46515	49460	chr17_KI270862v1_alt:46515-49460	0	-	46515	46515	8553170	2	44,535,	0,2410,
#Deleted in new
chr17_KI270862v1_alt	48955	52441	chr17_KI270862v1_alt:48955-52441	0	-	48955	48955	8553170	5	76,135,140,110,90,	0,1020,2137,2979,3396,
#Deleted in new
chr17_KI270862v1_alt	48962	52393	chr17_KI270862v1_alt:48962-52393	0	-	52330	52393	789624	5	69,135,140,110,103,	0,1013,2130,2972,3328,
#Deleted in new
chr17_KI270862v1_alt	48984	78844	chr17_KI270862v1_alt:48984-78844	0	-	48984	48984	8553170	6	47,135,140,110,60,59,	0,991,2108,2950,3367,29801,
#Deleted in new
chr17_KI270862v1_alt	50031	89781	chr17_KI270862v1_alt:50031-89781	0	-	51785	89781	789624	7	79,140,84,110,60,132,32,	0,1061,1689,1903,2320,39231,39718,
#Deleted in new
chr17_KI270862v1_alt	50822	71065	chr17_KI270862v1_alt:50822-71065	0	-	50822	50822	8553170	5	86,140,110,60,221,	0,270,1112,1529,20022,
#Deleted in new
chr17_KI270862v1_alt	51508	89328	chr17_KI270862v1_alt:51508-89328	0	-	51508	51508	8553170	4	296,110,60,66,	0,426,843,37754,
#Deleted in new
chr17_KI270862v1_alt	51642	71065	chr17_KI270862v1_alt:51642-71065	0	-	51642	51642	8553170	4	162,110,60,221,	0,292,709,19202,
#Deleted in new
chr17_KI270862v1_alt	89192	89786	chr17_KI270862v1_alt:89192-89786	0	-	89192	89192	8553170	2	202,37,	0,557,
#Deleted in new
chr17_KI270862v1_alt	89262	96548	chr17_KI270862v1_alt:89262-96548	0	-	89262	89262	8553170	5	132,98,75,105,204,	0,487,5313,6276,7082,
#Deleted in new
chr17_KI270862v1_alt	89306	127137	chr17_KI270862v1_alt:89306-127137	0	-	89306	89306	8553170	7	50,76,122,141,53,61,71,	0,21130,23930,26855,27866,33570,37760,
#Deleted in new
chr17_KI270862v1_alt	89766	113251	chr17_KI270862v1_alt:89766-113251	0	-	89766	113251	789624	6	81,105,76,123,166,15,	0,5772,6704,7481,20580,23470,
#Deleted in new
chr17_KI270862v1_alt	93823	96548	chr17_KI270862v1_alt:93823-96548	0	-	93823	93823	8553170	3	827,105,78,	0,1715,2647,
#Deleted in new
chr17_KI270862v1_alt	110386	122669	chr17_KI270862v1_alt:110386-122669	0	-	110386	122406	789624	5	126,122,141,53,318,	0,2850,5775,6786,11965,
#Deleted in new
chr17_KI270862v1_alt	113305	127318	chr17_KI270862v1_alt:113305-127318	2	-	113305	113305	8553170	5	53,141,53,61,252,	0,2856,3867,9571,13761,
#Deleted in new
chr17_KI270862v1_alt	116280	158985	chr17_KI270862v1_alt:116280-158985	0	-	116280	144258	789624	7	22,53,61,108,186,99,161,	0,892,6596,10786,18931,27903,42544,
#Deleted in new
chr17_KI270862v1_alt	126815	135323	chr17_KI270862v1_alt:126815-135323	0	-	126815	126815	8553170	2	359,112,	0,8396,
#Deleted in new
chr17_KI270862v1_alt	127068	169445	chr17_KI270862v1_alt:127068-169445	0	-	127068	169368	789624	3	106,186,185,	0,8143,42192,
#Deleted in new
chr17_KI270862v1_alt	135215	169445	chr17_KI270862v1_alt:135215-169445	0	-	135215	169368	789624	3	182,99,185,	0,8968,34045,
#Deleted in new
chr17_KI270862v1_alt	135338	170623	chr17_KI270862v1_alt:135338-170623	0	-	135338	169368	789624	4	59,99,185,206,	0,8845,33922,35079,
#Deleted in new
chr17_KI270862v1_alt	135345	224256	chr17_KI270862v1_alt:135345-224256	0	-	135345	169368	789624	5	52,99,185,143,118,	0,8838,33915,87043,88793,
#Deleted in new
chr17_KI270862v1_alt	144553	144820	chr17_KI270862v1_alt:144553-144820	3	-	144553	144553	8553170	1	267,	0,
#Deleted in new
chr17_KI270862v1_alt	169401	198651	chr17_KI270862v1_alt:169401-198651	0	-	169401	169401	8553170	3	44,429,65,	0,28251,29185,
#Deleted in new
chr17_KI270862v1_alt	197652	198795	chr17_KI270862v1_alt:197652-198795	0	-	197652	197652	8553170	3	429,65,69,	0,573,1074,
#Deleted in new
chr17_KI270862v1_alt	197655	198462	chr17_KI270862v1_alt:197655-198462	0	-	197655	197655	8553170	2	426,75,	0,732,
#Deleted in new
chr17_KI270862v1_alt	199811	200021	chr17_KI270862v1_alt:199811-200021	7	+	199811	199811	16724991	1	210,	0,
#Deleted in new
chr17_KI270862v1_alt	226364	229558	chr17_KI270862v1_alt:226364-229558	3	+	226364	226364	8553170	3	36,45,154,	0,374,3040,
#Deleted in new
chr17_KI270862v1_alt	240275	243012	chr17_KI270862v1_alt:240275-243012	3	+	240275	240289	8553170	1	2737,	0,
#Deleted in new
chr17_KI270862v1_alt	286300	342404	chr17_KI270862v1_alt:286300-342404	3	-	287472	342136	0	6	1225,137,207,107,200,332,	0,9936,16817,17627,20584,55772,
#Deleted in new
chr17_KI270862v1_alt	286564	307084	chr17_KI270862v1_alt:286564-307084	0	-	296323	307084	789624	4	961,137,79,200,	0,9672,17391,20320,
#Deleted in new
chr17_KI270862v1_alt	286565	342246	chr17_KI270862v1_alt:286565-342246	1	-	287472	307082	0	7	960,137,207,107,200,33,174,	0,9671,16552,17362,20319,25169,55507,
#Deleted in new
chr17_KI270862v1_alt	286880	342207	chr17_KI270862v1_alt:286880-342207	1	-	287472	342136	789624	2	645,135,	0,55192,
#Deleted in new
chr17_KI270862v1_alt	287180	303320	chr17_KI270862v1_alt:287180-303320	0	-	290026	303320	789624	4	345,47,137,203,	0,2807,9056,15937,
#Deleted in new
chr17_KI270862v1_alt	287283	342232	chr17_KI270862v1_alt:287283-342232	0	-	296352	342136	789624	4	242,137,200,160,	0,8953,19601,54789,
#Deleted in new
chr17_KI270862v1_alt	287353	342240	chr17_KI270862v1_alt:287353-342240	1	-	287465	342136	789624	3	172,200,168,	0,19531,54719,
#Deleted in new
chr17_KI270862v1_alt	303696	342177	chr17_KI270862v1_alt:303696-342177	0	-	303696	303696	8553170	4	338,200,33,105,	0,3188,8038,38376,
#Deleted in new
chr17_KI270862v1_alt	303706	342235	chr17_KI270862v1_alt:303706-342235	0	-	303706	303706	8553170	3	328,200,163,	0,3178,38366,
#Deleted in new
chr17_KI270862v1_alt	306773	342226	chr17_KI270862v1_alt:306773-342226	0	-	306773	306773	8553170	2	311,154,	0,35299,
#Deleted in new
chr17_KI270862v1_alt	340858	342232	chr17_KI270862v1_alt:340858-342232	0	-	340858	340858	8553170	1	1374,	0,
#Deleted in new
chr17_KI270862v1_alt	340903	341615	chr17_KI270862v1_alt:340903-341615	0	-	340903	340903	8553170	2	139,119,	0,593,
#Deleted in new
chr17_KI270862v1_alt	341069	342161	chr17_KI270862v1_alt:341069-342161	0	-	341069	341069	8553170	2	223,89,	0,1003,
#Deleted in new
chr17_KI270907v1_alt	16383	122924	chr17_KI270907v1_alt:16383-122924	0	+	75094	122924	789624	5	58,113,144,130,86,	0,58675,64839,66505,106455,
#Deleted in new
chr17_KI270907v1_alt	16404	82997	chr17_KI270907v1_alt:16404-82997	0	+	75094	82997	789624	5	37,176,113,144,109,	0,52299,58654,64818,66484,
#Deleted in new
chr17_KI270907v1_alt	45056	50000	chr17_KI270907v1_alt:45056-50000	3	-	45056	45056	8553170	2	523,225,	0,4719,
#Deleted in new
chr17_KI270907v1_alt	45755	47901	chr17_KI270907v1_alt:45755-47901	3	-	45755	45755	8553170	2	180,733,	0,1413,
#Deleted in new
chr17_KI270907v1_alt	49540	83018	chr17_KI270907v1_alt:49540-83018	0	+	75094	83018	789624	5	386,176,113,144,130,	0,19163,25518,31682,33348,
#Deleted in new
chr17_KI270907v1_alt	49795	83018	chr17_KI270907v1_alt:49795-83018	0	+	75094	83018	789624	4	131,113,144,130,	0,25263,31427,33093,
#Deleted in new
chr17_KI270907v1_alt	49830	122925	chr17_KI270907v1_alt:49830-122925	3	+	75094	122925	789624	6	96,176,113,144,130,87,	0,18873,25228,31392,33058,73008,
#Deleted in new
chr17_KI270907v1_alt	49836	53728	chr17_KI270907v1_alt:49836-53728	0	+	49836	49836	8553170	3	90,156,188,	0,3426,3704,
#Deleted in new
chr17_KI270907v1_alt	49847	122925	chr17_KI270907v1_alt:49847-122925	0	+	75094	122925	789624	5	198,113,144,130,87,	0,25211,31375,33041,72991,
#Deleted in new
chr17_KI270907v1_alt	61214	82931	chr17_KI270907v1_alt:61214-82931	0	+	75094	82931	789624	4	271,113,144,43,	0,13844,20008,21674,
#Deleted in new
chr17_KI270907v1_alt	62978	122865	chr17_KI270907v1_alt:62978-122865	0	+	75094	122865	789624	5	152,113,144,130,27,	0,12080,18244,19910,59860,
#Deleted in new
chr17_KI270907v1_alt	63526	122925	chr17_KI270907v1_alt:63526-122925	0	+	75094	122925	789624	5	44,113,144,130,87,	0,11532,17696,19362,59312,
#Deleted in new
chr17_KI270907v1_alt	63592	122925	chr17_KI270907v1_alt:63592-122925	0	+	75094	122925	789624	5	180,113,144,130,87,	0,11466,17630,19296,59246,
#Deleted in new
chr17_KI270907v1_alt	63764	81258	chr17_KI270907v1_alt:63764-81258	0	+	75094	81258	789624	3	338,113,36,	0,11294,17458,
#Deleted in new
chr17_KI270907v1_alt	66615	69432	chr17_KI270907v1_alt:66615-69432	0	+	66615	66615	8553170	3	248,176,109,	0,2088,2708,
#Deleted in new
chr17_KI270907v1_alt	68571	82916	chr17_KI270907v1_alt:68571-82916	0	+	75094	82916	789624	4	308,113,144,28,	0,6487,12651,14317,
#Deleted in new
chr17_KI270907v1_alt	69149	71433	chr17_KI270907v1_alt:69149-71433	3	-	69149	69149	789624	3	433,67,513,	0,1622,1771,
#Deleted in new
chr17_KI270907v1_alt	69152	71433	chr17_KI270907v1_alt:69152-71433	0	-	69152	69152	8553170	3	430,67,517,	0,1619,1764,
#Deleted in new
chr17_KI270907v1_alt	69152	71404	chr17_KI270907v1_alt:69152-71404	0	-	69152	69152	8553170	1	2252,	0,
#Deleted in new
chr17_KI270907v1_alt	69193	70496	chr17_KI270907v1_alt:69193-70496	1	-	69193	69193	8553170	2	389,114,	0,1189,
#Deleted in new
chr17_KI270907v1_alt	70486	71123	chr17_KI270907v1_alt:70486-71123	0	-	70486	70486	8553170	2	352,203,	0,434,
#Deleted in new
chr17_KI270907v1_alt	71610	83018	chr17_KI270907v1_alt:71610-83018	0	+	75094	83018	789624	4	104,113,144,130,	0,3448,9612,11278,
#Deleted in new
chr17_KI270907v1_alt	80184	81246	chr17_KI270907v1_alt:80184-81246	3	-	80184	80184	8553170	2	192,219,	0,843,
#Deleted in new
chr17_KI270907v1_alt	80184	81121	chr17_KI270907v1_alt:80184-81121	0	-	80184	80184	8553170	2	192,115,	0,822,
#Deleted in new
chr17_KI270907v1_alt	82957	122925	chr17_KI270907v1_alt:82957-122925	0	+	82957	82957	8553170	2	61,87,	0,39881,
#Deleted in new
chr17_KI270907v1_alt	97326	122925	chr17_KI270907v1_alt:97326-122925	0	+	97326	97326	8553170	2	266,87,	0,25512,
#Deleted in new
chr17_KI270908v1_alt	7462	7520	chr17_KI270908v1_alt:7462-7520	0	-	7462	7462	8553170	1	58,	0,
#Deleted in new
chr17_KI270908v1_alt	7462	7543	chr17_KI270908v1_alt:7462-7543	3	-	7462	7462	8553170	1	81,	0,
#Deleted in new
chr17_KI270908v1_alt	17868	18000	chr17_KI270908v1_alt:17868-18000	7	-	17868	17868	16724991	1	132,	0,
#Deleted in new
chr17_KI270908v1_alt	61904	62560	chr17_KI270908v1_alt:61904-62560	3	-	61904	61904	8553170	2	190,196,	0,460,
#Deleted in new
chr17_KI270908v1_alt	84404	120802	chr17_KI270908v1_alt:84404-120802	3	-	85958	120784	0	17	1732,106,135,78,99,123,109,99,105,91,68,66,84,81,183,408,675,	0,1842,2081,2305,2585,2766,3014,4047,8812,9717,10127,10367,10543,10699,11022,11774,35723,
#Deleted in new
chr17_KI270908v1_alt	84404	100927	chr17_KI270908v1_alt:84404-100927	1	-	85958	100791	789624	16	1732,106,135,78,99,123,109,99,105,91,68,84,81,183,408,193,	0,1842,2081,2305,2585,2766,3014,4047,8812,9717,10127,10543,10699,11022,11774,16330,
#Deleted in new
chr17_KI270908v1_alt	84411	116136	chr17_KI270908v1_alt:84411-116136	1	-	85958	96220	0	17	1725,106,135,78,99,123,109,99,105,91,68,66,84,81,183,408,68,	0,1835,2074,2298,2578,2759,3007,4040,8805,9710,10120,10360,10536,10692,11015,11767,31657,
#Deleted in new
chr17_KI270908v1_alt	84411	122854	chr17_KI270908v1_alt:84411-122854	0	-	84411	84411	8553170	17	1725,106,135,78,99,123,109,99,105,478,84,81,183,408,675,132,134,	0,1835,2074,2298,2578,2759,3007,4040,8805,9710,10536,10692,11015,11767,35716,37714,38309,
#Deleted in new
chr17_KI270908v1_alt	85445	96437	chr17_KI270908v1_alt:85445-96437	1	-	85958	96220	789624	15	691,106,135,78,99,123,109,99,105,91,68,66,84,183,259,	0,801,1040,1264,1544,1725,1973,3006,7771,8676,9086,9326,9502,9981,10733,
#Deleted in new
chr17_KI270908v1_alt	85929	86411	chr17_KI270908v1_alt:85929-86411	0	-	85929	85929	8553170	2	207,165,	0,317,
#Deleted in new
chr17_KI270908v1_alt	85957	86666	chr17_KI270908v1_alt:85957-86666	0	-	85957	85957	8553170	3	179,106,181,	0,289,528,
#Deleted in new
chr17_KI270908v1_alt	85958	120784	chr17_KI270908v1_alt:85958-120784	1	-	85958	120784	789624	16	178,106,135,78,99,123,109,99,105,91,68,84,81,183,408,657,	0,288,527,751,1031,1212,1460,2493,7258,8163,8573,8989,9145,9468,10220,34169,
#Deleted in new
chr17_KI270908v1_alt	86565	87273	chr17_KI270908v1_alt:86565-87273	0	-	86565	86565	8553170	3	55,379,103,	0,144,605,
#Deleted in new
chr17_KI270908v1_alt	87434	87980	chr17_KI270908v1_alt:87434-87980	3	+	87434	87434	8553170	2	303,154,	0,392,
#Deleted in new
chr17_KI270908v1_alt	87707	94171	chr17_KI270908v1_alt:87707-94171	0	-	87707	87707	8553170	4	24,99,105,50,	0,744,5509,6414,
#Deleted in new
chr17_KI270908v1_alt	88016	100889	chr17_KI270908v1_alt:88016-100889	0	-	88016	88016	8553170	9	534,105,91,68,84,81,183,408,155,	0,5200,6105,6515,6931,7087,7410,8162,12718,
#Deleted in new
chr17_KI270908v1_alt	88467	94689	chr17_KI270908v1_alt:88467-94689	0	-	88467	88467	8553170	5	83,89,105,91,158,	0,3615,4749,5654,6064,
#Deleted in new
chr17_KI270908v1_alt	93216	116121	chr17_KI270908v1_alt:93216-116121	0	-	94999	96220	789624	8	105,91,68,84,81,79,408,53,	0,905,1315,1731,1887,2314,2962,22852,
#Deleted in new
chr17_KI270908v1_alt	93276	95205	chr17_KI270908v1_alt:93276-95205	0	-	93276	93276	8553170	5	45,91,68,66,258,	0,845,1255,1495,1671,
#Deleted in new
chr17_KI270908v1_alt	94947	100929	chr17_KI270908v1_alt:94947-100929	0	-	94947	100791	789624	5	84,81,183,237,195,	0,156,479,1402,5787,
#Deleted in new
chr17_KI270908v1_alt	94977	123358	chr17_KI270908v1_alt:94977-123358	0	-	94977	94977	8553170	4	54,506,408,102,	0,126,1201,28279,
#Deleted in new
chr17_KI270908v1_alt	98035	100888	chr17_KI270908v1_alt:98035-100888	0	-	98035	98035	8553170	1	2853,	0,
#Deleted in new
chr17_KI270908v1_alt	119856	124926	chr17_KI270908v1_alt:119856-124926	1	-	119992	120784	0	5	946,132,134,995,112,	0,2269,2864,3400,4958,
#Deleted in new
chr17_KI270908v1_alt	119857	123421	chr17_KI270908v1_alt:119857-123421	1	-	119992	120784	0	4	945,132,134,165,	0,2268,2863,3399,
#Deleted in new
chr17_KI270908v1_alt	126404	180899	chr17_KI270908v1_alt:126404-180899	3	-	128362	172639	0	12	2070,158,64,194,146,918,271,385,627,248,89,93,	0,3577,4263,9570,14371,17108,21922,31962,38851,41651,46187,54402,
#Deleted in new
chr17_KI270908v1_alt	126407	136778	chr17_KI270908v1_alt:126407-136778	0	-	126407	126407	8553170	5	2067,158,64,194,145,	0,3574,4260,9567,10226,
#Deleted in new
chr17_KI270908v1_alt	126408	180883	chr17_KI270908v1_alt:126408-180883	0	-	165738	172639	789624	11	2066,158,64,194,146,918,271,385,627,89,77,	0,3573,4259,9566,14367,17104,21918,31958,38847,46183,54398,
#Deleted in new
chr17_KI270908v1_alt	127975	180884	chr17_KI270908v1_alt:127975-180884	0	-	148512	172639	789624	11	499,158,64,194,146,918,271,627,248,89,78,	0,2006,2692,7999,12800,15537,20351,37280,40080,44616,52831,
#Deleted in new
chr17_KI270908v1_alt	128053	136038	chr17_KI270908v1_alt:128053-136038	0	-	128362	136038	789624	4	421,101,64,64,	0,1928,2614,7921,
#Deleted in new
chr17_KI270908v1_alt	128420	131564	chr17_KI270908v1_alt:128420-131564	0	-	128420	128420	8553170	4	54,158,64,223,	0,1561,2247,2921,
#Deleted in new
chr17_KI270908v1_alt	130018	130878	chr17_KI270908v1_alt:130018-130878	0	-	130018	130018	8553170	2	121,211,	0,649,
#Deleted in new
chr17_KI270908v1_alt	130050	136012	chr17_KI270908v1_alt:130050-136012	0	-	130631	136012	789624	3	89,200,38,	0,481,5924,
#Deleted in new
chr17_KI270908v1_alt	130119	138617	chr17_KI270908v1_alt:130119-138617	0	-	130119	130119	8553170	4	20,64,194,201,	0,548,5855,8297,
#Deleted in new
chr17_KI270908v1_alt	130667	178013	chr17_KI270908v1_alt:130667-178013	0	-	165738	172639	789624	9	64,194,146,918,271,385,627,89,131,	0,5307,10108,12845,17659,27699,34588,41924,47215,
#Deleted in new
chr17_KI270908v1_alt	143001	154223	chr17_KI270908v1_alt:143001-154223	3	+	143001	143001	8553170	4	245,100,116,308,	0,1954,3426,10914,
#Deleted in new
chr17_KI270908v1_alt	143095	144929	chr17_KI270908v1_alt:143095-144929	0	-	143095	143095	8553170	1	1834,	0,
#Deleted in new
chr17_KI270908v1_alt	143095	150590	chr17_KI270908v1_alt:143095-150590	0	-	143095	143095	8553170	2	1335,1050,	0,6445,
#Deleted in new
chr17_KI270908v1_alt	158403	178017	chr17_KI270908v1_alt:158403-178017	0	-	158403	158403	8553170	3	348,89,135,	0,14188,19479,
#Deleted in new
chr17_KI270908v1_alt	165366	180893	chr17_KI270908v1_alt:165366-180893	0	-	165366	165788	789624	2	516,87,	0,15440,
#Deleted in new
chr17_KI270908v1_alt	165521	180896	chr17_KI270908v1_alt:165521-180896	0	-	165521	172639	789624	4	361,47,89,90,	0,2735,7070,15285,
#Deleted in new
chr17_KI270908v1_alt	165752	180904	chr17_KI270908v1_alt:165752-180904	0	-	165752	165752	8553170	5	130,186,47,89,98,	0,291,2504,6839,15054,
#Deleted in new
chr17_KI270908v1_alt	165851	180896	chr17_KI270908v1_alt:165851-180896	0	-	168051	172639	789624	4	31,343,89,90,	0,2109,6740,14955,
#Deleted in new
chr17_KI270908v1_alt	167229	172680	chr17_KI270908v1_alt:167229-172680	0	-	167229	167229	8553170	2	1074,89,	0,5362,
#Deleted in new
chr17_KI270908v1_alt	196895	205311	chr17_KI270908v1_alt:196895-205311	5	-	196895	196895	16724991	4	1799,50,105,1289,	0,3503,6444,7127,
#Deleted in new
chr17_KI270908v1_alt	198263	252473	chr17_KI270908v1_alt:198263-252473	7	-	198263	198263	16724991	12	52,140,55,50,105,1512,119,81,72,72,72,2609,	0,158,376,2135,5076,5759,25179,43037,43766,46638,49479,51601,
#Deleted in new
chr17_KI270908v1_alt	228601	228882	chr17_KI270908v1_alt:228601-228882	3	-	228601	228601	8553170	1	281,	0,
#Deleted in new
chr17_KI270908v1_alt	233714	235976	chr17_KI270908v1_alt:233714-235976	3	+	233714	233714	8553170	1	2262,	0,
#Deleted in new
chr17_KI270908v1_alt	247941	251619	chr17_KI270908v1_alt:247941-251619	1	+	247941	247941	8553170	2	141,419,	0,3259,
#Deleted in new
chr17_KI270908v1_alt	247942	260905	chr17_KI270908v1_alt:247942-260905	1	+	247942	247942	8553170	2	140,361,	0,12602,
#Deleted in new
chr17_KI270908v1_alt	248014	256508	chr17_KI270908v1_alt:248014-256508	0	+	248014	248014	8553170	2	68,212,	0,8282,
#Deleted in new
chr17_KI270908v1_alt	248037	265368	chr17_KI270908v1_alt:248037-265368	3	+	248037	248037	8553170	2	45,585,	0,16746,
#Deleted in new
chr17_KI270908v1_alt	251918	260876	chr17_KI270908v1_alt:251918-260876	3	-	251918	251918	8553170	4	275,100,98,353,	0,852,1659,8605,
#Deleted in new
chr17_KI270908v1_alt	254992	255943	chr17_KI270908v1_alt:254992-255943	1	+	254992	254992	8553170	2	413,147,	0,804,
#Deleted in new
chr17_KI270908v1_alt	288009	289068	chr17_KI270908v1_alt:288009-289068	7	+	288009	288009	16724991	1	1059,	0,
#Deleted in new
chr17_KI270908v1_alt	303009	304481	chr17_KI270908v1_alt:303009-304481	7	-	303009	303009	16724991	1	1472,	0,
#Deleted in new
chr17_KI270908v1_alt	310706	311054	chr17_KI270908v1_alt:310706-311054	7	+	310706	310706	16724991	1	348,	0,
#Deleted in new
chr17_KI270908v1_alt	322451	338518	chr17_KI270908v1_alt:322451-338518	5	+	322451	322451	16724991	4	45,134,255,112,	0,1580,9576,15955,
#Deleted in new
chr17_KI270908v1_alt	322463	348319	chr17_KI270908v1_alt:322463-348319	4	+	322463	322463	16724991	4	33,134,255,291,	0,1568,9564,25565,
#Deleted in new
chr17_KI270908v1_alt	322465	332580	chr17_KI270908v1_alt:322465-332580	4	+	322465	322465	16724991	3	31,134,553,	0,1566,9562,
#Deleted in new
chr17_KI270908v1_alt	322469	338597	chr17_KI270908v1_alt:322469-338597	6	+	322469	322469	16724991	5	27,134,255,98,191,	0,1562,9558,14955,15937,
#Deleted in new
chr17_KI270908v1_alt	322469	332729	chr17_KI270908v1_alt:322469-332729	4	+	322469	322469	16724991	4	27,134,255,121,	0,1562,9558,10139,
#Deleted in new
chr17_KI270908v1_alt	322733	340083	chr17_KI270908v1_alt:322733-340083	4	+	322733	322733	16724991	4	543,134,255,1677,	0,1298,9294,15673,
#Deleted in new
chr17_KI270908v1_alt	324031	518665	chr17_KI270908v1_alt:324031-518665	0	+	324031	324031	8553170	4	134,255,88,81,	0,7996,185100,194553,
#Deleted in new
chr17_KI270908v1_alt	324031	338468	chr17_KI270908v1_alt:324031-338468	4	+	324031	324031	16724991	4	134,307,255,62,	0,5468,7996,14375,
#Deleted in new
chr17_KI270908v1_alt	324049	518609	chr17_KI270908v1_alt:324049-518609	3	+	324049	324049	8553170	5	116,255,76,88,25,	0,7978,50899,185082,194535,
#Deleted in new
chr17_KI270908v1_alt	335172	338568	chr17_KI270908v1_alt:335172-338568	5	+	335172	335172	16724991	2	126,162,	0,3234,
#Deleted in new
chr17_KI270908v1_alt	339324	348358	chr17_KI270908v1_alt:339324-348358	4	+	339324	339324	16724991	2	201,330,	0,8704,
#Deleted in new
chr17_KI270908v1_alt	341108	348136	chr17_KI270908v1_alt:341108-348136	4	+	341108	341108	16724991	2	546,108,	0,6920,
#Deleted in new
chr17_KI270908v1_alt	341108	344434	chr17_KI270908v1_alt:341108-344434	4	+	341108	341108	16724991	2	546,1912,	0,1414,
#Deleted in new
chr17_KI270908v1_alt	341570	348360	chr17_KI270908v1_alt:341570-348360	4	+	341570	341570	16724991	3	84,67,332,	0,952,6458,
#Deleted in new
chr17_KI270908v1_alt	342495	344437	chr17_KI270908v1_alt:342495-344437	4	+	342495	342495	16724991	1	1942,	0,
#Deleted in new
chr17_KI270908v1_alt	347798	350344	chr17_KI270908v1_alt:347798-350344	5	+	347798	347798	16724991	1	2546,	0,
#Deleted in new
chr17_KI270908v1_alt	433802	435077	chr17_KI270908v1_alt:433802-435077	3	-	433802	433802	8553170	2	242,275,	0,1000,
#Deleted in new
chr17_KI270908v1_alt	435452	436769	chr17_KI270908v1_alt:435452-436769	3	-	435452	435452	8553170	2	174,386,	0,931,
#Deleted in new
chr17_KI270908v1_alt	486390	537949	chr17_KI270908v1_alt:486390-537949	1	+	486655	536886	789624	13	298,88,120,86,107,87,121,154,61,73,86,136,1204,	0,22741,32194,37086,44946,45292,45825,46148,46611,48869,49183,49445,50355,
#Deleted in new
chr17_KI270908v1_alt	486390	537949	chr17_KI270908v1_alt:486390-537949	1	+	486655	532654	789624	11	298,88,107,121,154,61,73,86,136,42,1204,	0,22741,44946,45825,46148,46611,48869,49183,49445,49738,50355,
#Deleted in new
chr17_KI270908v1_alt	486390	537949	chr17_KI270908v1_alt:486390-537949	1	+	518680	536886	789624	12	298,88,120,107,121,154,61,73,86,136,42,1204,	0,22741,32194,44946,45825,46148,46611,48869,49183,49445,49738,50355,
#Deleted in new
chr17_KI270908v1_alt	486417	537947	chr17_KI270908v1_alt:486417-537947	0	+	486655	532304	789624	13	271,88,120,86,107,36,154,61,73,86,136,42,1202,	0,22714,32167,37059,44919,45883,46121,46584,48842,49156,49418,49711,50328,
#Deleted in new
chr17_KI270908v1_alt	486430	537948	chr17_KI270908v1_alt:486430-537948	1	+	486655	536886	0	13	258,88,120,86,107,121,154,61,73,86,136,42,1203,	0,22701,32154,37046,44906,45785,46108,46571,48829,49143,49405,49698,50315,
#Deleted in new
chr17_KI270908v1_alt	486637	536886	chr17_KI270908v1_alt:486637-536886	1	+	486655	536886	0	12	51,88,86,107,121,154,61,73,86,136,42,141,	0,22494,36839,44699,45578,45901,46364,48622,48936,49198,49491,50108,
#Deleted in new
chr17_KI270908v1_alt	486655	537950	chr17_KI270908v1_alt:486655-537950	1	+	486655	536886	0	14	33,88,120,86,107,87,121,154,61,73,86,136,42,1205,	0,22476,31929,36821,44681,45027,45560,45883,46346,48604,48918,49180,49473,50090,
#Deleted in new
chr17_KI270908v1_alt	486655	536886	chr17_KI270908v1_alt:486655-536886	1	+	486655	536886	0	12	33,88,120,86,107,121,154,61,73,86,136,141,	0,22476,31929,36821,44681,45560,45883,46346,48604,48918,49180,50090,
#Deleted in new
chr17_KI270908v1_alt	486679	533062	chr17_KI270908v1_alt:486679-533062	2	+	486679	486679	8553170	6	9,88,86,107,477,61,	0,22452,36797,44657,45536,46322,
#Deleted in new
chr17_KI270908v1_alt	509195	532247	chr17_KI270908v1_alt:509195-532247	0	+	509195	527658	789624	6	24,120,86,110,107,32,	0,9389,14281,18412,22141,23020,
#Deleted in new
chr17_KI270908v1_alt	518679	536963	chr17_KI270908v1_alt:518679-536963	0	+	518679	535318	789624	8	25,86,107,121,61,73,86,218,	0,4797,12657,13536,14322,16580,16894,18066,
#Deleted in new
chr17_KI270908v1_alt	532521	535324	chr17_KI270908v1_alt:532521-535324	0	+	532521	532521	8553170	2	541,65,	0,2738,
#Deleted in new
chr17_KI270908v1_alt	535259	537766	chr17_KI270908v1_alt:535259-537766	0	+	535259	535919	789624	4	73,136,42,1021,	0,576,869,1486,
#Deleted in new
chr17_KI270908v1_alt	535259	536767	chr17_KI270908v1_alt:535259-536767	0	+	535259	536767	789624	4	73,86,42,22,	0,314,869,1486,
#Deleted in new
chr17_KI270908v1_alt	545476	597641	chr17_KI270908v1_alt:545476-597641	3	-	545476	545476	8553170	2	806,899,	0,51266,
#Deleted in new
chr17_KI270908v1_alt	545771	597728	chr17_KI270908v1_alt:545771-597728	0	-	545771	545771	8553170	2	511,121,	0,51836,
#Deleted in new
chr17_KI270908v1_alt	546106	546878	chr17_KI270908v1_alt:546106-546878	0	-	546106	546106	8553170	2	176,119,	0,653,
#Deleted in new
chr17_KI270908v1_alt	546955	549193	chr17_KI270908v1_alt:546955-549193	3	+	547027	549082	789624	1	2238,	0,
#Deleted in new
chr17_KI270908v1_alt	596512	730446	chr17_KI270908v1_alt:596512-730446	1	+	664465	726283	0	11	305,150,87,66,56,127,266,93,82,113,4379,	0,67936,77464,83980,92646,97066,102005,115916,119849,124219,129555,
#Deleted in new
chr17_KI270908v1_alt	596512	730446	chr17_KI270908v1_alt:596512-730446	1	+	664465	726283	789624	15	305,150,87,87,66,753,56,198,127,54,266,93,82,113,4379,	0,67936,77464,79990,83980,88784,92646,95484,97066,99530,102005,115916,119849,124219,129555,
#Deleted in new
chr17_KI270908v1_alt	596512	730446	chr17_KI270908v1_alt:596512-730446	1	+	664465	726283	789624	14	305,150,87,87,66,753,56,198,127,266,93,82,113,4379,	0,67936,77464,79990,83980,88784,92646,95484,97066,102005,115916,119849,124219,129555,
#Deleted in new
chr17_KI270908v1_alt	596512	730446	chr17_KI270908v1_alt:596512-730446	1	+	664465	726283	0	12	305,150,87,87,66,56,127,266,93,82,113,4379,	0,67936,77464,79990,83980,92646,97066,102005,115916,119849,124219,129555,
#Deleted in new
chr17_KI270908v1_alt	596512	730446	chr17_KI270908v1_alt:596512-730446	3	+	664465	726283	0	11	305,150,87,87,66,56,127,266,82,113,4379,	0,67936,77464,79990,83980,92646,97066,102005,119849,124219,129555,
#Deleted in new
chr17_KI270908v1_alt	596696	680543	chr17_KI270908v1_alt:596696-680543	0	+	664465	671339	789624	5	121,150,135,87,51,	0,67752,74596,77280,83796,
#Deleted in new
chr17_KI270908v1_alt	596706	720844	chr17_KI270908v1_alt:596706-720844	0	+	596706	596706	8553170	7	111,150,66,56,127,266,113,	0,67742,83786,92452,96872,101811,124025,
#Deleted in new
chr17_KI270908v1_alt	596798	726295	chr17_KI270908v1_alt:596798-726295	1	+	664465	726283	0	9	19,150,66,56,127,266,82,113,228,	0,67650,83694,92360,96780,101719,119563,123933,129269,
#Deleted in new
chr17_KI270908v1_alt	596804	730446	chr17_KI270908v1_alt:596804-730446	1	+	664465	726283	0	10	13,150,66,56,127,266,93,82,113,4379,	0,67644,83688,92354,96774,101713,115624,119557,123927,129263,
#Deleted in new
chr17_KI270908v1_alt	597910	600926	chr17_KI270908v1_alt:597910-600926	3	+	597910	597910	789624	1	3016,	0,
#Deleted in new
chr17_KI270908v1_alt	609776	612879	chr17_KI270908v1_alt:609776-612879	3	-	609776	609776	8553170	2	714,45,	0,3058,
#Deleted in new
chr17_KI270908v1_alt	633938	634216	chr17_KI270908v1_alt:633938-634216	3	+	633938	633938	8553170	1	278,	0,
#Deleted in new
chr17_KI270908v1_alt	664465	726283	chr17_KI270908v1_alt:664465-726283	1	+	664465	726283	0	10	133,87,87,66,56,127,266,82,113,216,	0,9511,12037,16027,24693,29113,34052,51896,56266,61602,
#Deleted in new
chr17_KI270908v1_alt	664465	726283	chr17_KI270908v1_alt:664465-726283	1	+	664465	726283	0	10	133,87,66,56,127,266,93,82,113,216,	0,9511,16027,24693,29113,34052,47963,51896,56266,61602,
#Deleted in new
chr17_KI270908v1_alt	664465	726283	chr17_KI270908v1_alt:664465-726283	1	+	664465	726283	789624	13	133,87,87,66,753,56,198,127,266,93,82,113,216,	0,9511,12037,16027,20831,24693,27531,29113,34052,47963,51896,56266,61602,
#Deleted in new
chr17_KI270908v1_alt	664465	726283	chr17_KI270908v1_alt:664465-726283	1	+	664465	726283	789624	14	133,87,87,66,753,56,198,127,54,266,93,82,113,216,	0,9511,12037,16027,20831,24693,27531,29113,31577,34052,47963,51896,56266,61602,
#Deleted in new
chr17_KI270908v1_alt	664465	726283	chr17_KI270908v1_alt:664465-726283	1	+	664465	726283	0	11	133,87,87,66,56,127,266,93,82,113,216,	0,9511,12037,16027,24693,29113,34052,47963,51896,56266,61602,
#Deleted in new
chr17_KI270908v1_alt	674900	726543	chr17_KI270908v1_alt:674900-726543	1	+	680392	726283	789624	7	5658,56,127,266,82,113,476,	0,14258,18678,23617,41461,45831,51167,
#Deleted in new
chr17_KI270908v1_alt	677609	682624	chr17_KI270908v1_alt:677609-682624	0	+	677609	677609	8553170	1	5015,	0,
#Deleted in new
chr17_KI270908v1_alt	684984	686049	chr17_KI270908v1_alt:684984-686049	0	+	684984	684984	8553170	1	1065,	0,
#Deleted in new
chr17_KI270908v1_alt	687777	689214	chr17_KI270908v1_alt:687777-689214	0	+	687777	687777	8553170	2	86,56,	0,1381,
#Deleted in new
chr17_KI270908v1_alt	732027	748231	chr17_KI270908v1_alt:732027-748231	0	-	732027	732027	8553170	8	1788,253,113,58,125,149,189,6418,	0,2131,3164,3487,4245,8622,9111,9786,
#Deleted in new
chr17_KI270908v1_alt	732027	925978	chr17_KI270908v1_alt:732027-925978	1	-	733587	874248	789624	15	1788,253,113,58,125,149,189,183,172,196,119,102,142,1378,138,	0,2131,3164,3487,4245,8622,9111,9786,20615,36608,37620,52514,64638,140932,193813,
#Deleted in new
chr17_KI270908v1_alt	732029	742177	chr17_KI270908v1_alt:732029-742177	0	-	732029	732029	8553170	7	1786,253,113,58,125,149,364,	0,2129,3162,3485,4243,8620,9784,
#Deleted in new
chr17_KI270908v1_alt	732036	874282	chr17_KI270908v1_alt:732036-874282	1	-	733587	874248	789624	13	1779,253,113,58,122,149,183,172,196,119,102,142,1323,	0,2122,3155,3478,4236,8613,9777,20606,36599,37611,52505,64629,140923,
#Deleted in new
chr17_KI270908v1_alt	732064	895010	chr17_KI270908v1_alt:732064-895010	1	-	733587	874248	789624	15	1751,253,113,58,125,149,189,183,172,196,119,102,142,1378,84,	0,2094,3127,3450,4208,8585,9074,9749,20578,36571,37583,52477,64601,140895,162862,
#Deleted in new
chr17_KI270908v1_alt	732067	894904	chr17_KI270908v1_alt:732067-894904	1	-	733587	874248	789624	15	1748,253,113,58,125,149,189,183,172,196,119,102,142,1378,382,	0,2091,3124,3447,4205,8582,9071,9746,20575,36568,37580,52474,64598,140892,162455,
#Deleted in new
chr17_KI270908v1_alt	732079	927544	chr17_KI270908v1_alt:732079-927544	3	-	733587	874248	789624	16	1736,253,113,58,122,149,189,183,172,196,119,102,142,1378,134,34,	0,2079,3112,3435,4193,8570,9059,9734,20563,36556,37568,52462,64586,140880,193761,195431,
#Deleted in new
chr17_KI270908v1_alt	733185	734678	chr17_KI270908v1_alt:733185-734678	0	-	733185	733185	8553170	1	1493,	0,
#Deleted in new
chr17_KI270908v1_alt	734276	735624	chr17_KI270908v1_alt:734276-735624	0	-	734276	734276	8553170	3	135,113,110,	0,915,1238,
#Deleted in new
chr17_KI270908v1_alt	735210	740829	chr17_KI270908v1_alt:735210-740829	0	-	735210	735210	8553170	4	94,58,125,180,	0,304,1062,5439,
#Deleted in new
chr17_KI270908v1_alt	737424	737882	chr17_KI270908v1_alt:737424-737882	3	+	737424	737424	8553170	2	54,250,	0,208,
#Deleted in new
chr17_KI270908v1_alt	740134	741386	chr17_KI270908v1_alt:740134-741386	0	-	740134	740134	8553170	2	664,248,	0,1004,
#Deleted in new
chr17_KI270908v1_alt	740770	741662	chr17_KI270908v1_alt:740770-741662	0	-	740770	740770	8553170	2	28,524,	0,368,
#Deleted in new
chr17_KI270908v1_alt	752446	873045	chr17_KI270908v1_alt:752446-873045	0	-	752446	752446	8553170	6	368,196,119,102,142,86,	0,16189,17201,32095,44219,120513,
#Deleted in new
chr17_KI270908v1_alt	855007	873224	chr17_KI270908v1_alt:855007-873224	0	-	855007	855007	8553170	2	63,265,	0,17952,
#Deleted in new
chr17_KI270908v1_alt	873831	927537	chr17_KI270908v1_alt:873831-927537	0	-	873831	874248	789624	3	506,134,27,	0,52009,53679,
#Deleted in new
chr17_KI270908v1_alt	873881	895983	chr17_KI270908v1_alt:873881-895983	0	-	873881	874248	789624	2	456,130,	0,21972,
#Deleted in new
chr17_KI270908v1_alt	874221	926884	chr17_KI270908v1_alt:874221-926884	0	-	874221	874248	789624	3	116,134,154,	0,51619,52509,
#Deleted in new
chr17_KI270908v1_alt	895679	898825	chr17_KI270908v1_alt:895679-898825	3	+	895679	895679	789624	2	163,354,	0,2792,
#Deleted in new
chr17_KI270908v1_alt	895735	898641	chr17_KI270908v1_alt:895735-898641	1	+	895735	895735	8553170	2	254,170,	0,2736,
#Deleted in new
chr17_KI270908v1_alt	898161	898827	chr17_KI270908v1_alt:898161-898827	0	+	898161	898161	8553170	1	666,	0,
#Deleted in new
chr17_KI270908v1_alt	917242	917344	chr17_KI270908v1_alt:917242-917344	3	-	917242	917242	8553170	1	102,	0,
#Deleted in new
chr17_KI270908v1_alt	946027	947466	chr17_KI270908v1_alt:946027-947466	7	+	946027	946027	16724991	1	1439,	0,
#Deleted in new
chr17_KI270908v1_alt	961964	963012	chr17_KI270908v1_alt:961964-963012	7	-	961964	961964	16724991	1	1048,	0,
#Deleted in new
chr17_KI270908v1_alt	969426	969909	chr17_KI270908v1_alt:969426-969909	5	+	969426	969426	16724991	1	483,	0,
#Deleted in new
chr17_KI270908v1_alt	969801	971082	chr17_KI270908v1_alt:969801-971082	7	+	969801	969801	16724991	2	107,191,	0,1090,
#Deleted in new
chr17_KI270908v1_alt	977172	1099355	chr17_KI270908v1_alt:977172-1099355	3	-	1036806	1095989	789624	5	635,140,111,165,89,	0,59613,113289,118669,122094,
#Deleted in new
chr17_KI270908v1_alt	1028381	1099388	chr17_KI270908v1_alt:1028381-1099388	1	-	1036806	1095989	789624	5	203,140,111,165,122,	0,8404,62080,67460,70885,
#Deleted in new
chr17_KI270908v1_alt	1029999	1075353	chr17_KI270908v1_alt:1029999-1075353	3	+	1043557	1075284	789624	13	1292,72,72,81,72,75,119,1532,105,50,55,140,118,	0,9905,12777,13497,29865,30496,35944,38012,40114,43104,44857,44990,45236,
#Deleted in new
chr17_KI270908v1_alt	1032358	1075338	chr17_KI270908v1_alt:1032358-1075338	1	+	1032393	1075284	789624	11	2644,72,72,81,72,75,119,1532,105,50,103,	0,7546,10418,11138,27506,28137,33585,35653,37755,40745,42877,
#Deleted in new
chr17_KI270908v1_alt	1032390	1075355	chr17_KI270908v1_alt:1032390-1075355	1	+	1032393	1075284	789624	14	2612,72,72,72,81,72,75,119,1532,105,50,55,140,120,	0,4663,7514,10386,11106,27474,28105,33553,35621,37723,40713,42466,42599,42845,
#Deleted in new
chr17_KI270908v1_alt	1032390	1075355	chr17_KI270908v1_alt:1032390-1075355	1	+	1032393	1075284	789624	13	2612,72,72,81,72,75,119,1532,105,50,55,140,120,	0,7514,10386,11106,27474,28105,33553,35621,37723,40713,42466,42599,42845,
#Deleted in new
chr17_KI270908v1_alt	1036393	1099336	chr17_KI270908v1_alt:1036393-1099336	1	-	1036806	1095989	789624	5	312,140,111,165,70,	0,392,54068,59448,62873,
#Deleted in new
chr17_KI270908v1_alt	1046777	1099388	chr17_KI270908v1_alt:1046777-1099388	1	-	1048538	1095989	789624	4	1769,111,165,122,	0,43684,49064,52489,
#Deleted in new
chr17_KI270908v1_alt	1046781	1090524	chr17_KI270908v1_alt:1046781-1090524	0	-	1074925	1090524	789624	4	1765,99,266,63,	0,28051,30288,43680,
#Deleted in new
chr17_KI270908v1_alt	1048455	1099388	chr17_KI270908v1_alt:1048455-1099388	1	-	1048455	1095989	789624	5	91,76,111,165,122,	0,9573,42006,47386,50811,
#Deleted in new
chr17_KI270908v1_alt	1057212	1057493	chr17_KI270908v1_alt:1057212-1057493	3	+	1057212	1057212	8553170	1	281,	0,
#Deleted in new
chr17_KI270908v1_alt	1067906	1099317	chr17_KI270908v1_alt:1067906-1099317	1	-	1068131	1095989	789624	4	254,111,165,51,	0,22555,27935,31360,
#Deleted in new
chr17_KI270908v1_alt	1068014	1099309	chr17_KI270908v1_alt:1068014-1099309	1	-	1068139	1095989	789624	5	146,266,111,165,43,	0,9055,22447,27827,31252,
#Deleted in new
chr17_KI270908v1_alt	1072237	1099323	chr17_KI270908v1_alt:1072237-1099323	1	-	1072390	1095989	789624	4	158,111,165,57,	0,18224,23604,27029,
#Deleted in new
chr17_KI270908v1_alt	1076957	1099355	chr17_KI270908v1_alt:1076957-1099355	0	-	1077063	1095989	789624	4	378,111,165,89,	0,13504,18884,22309,
#Deleted in new
chr17_KI270908v1_alt	1110345	1276876	chr17_KI270908v1_alt:1110345-1276876	3	+	1110452	1275235	789624	21	119,86,100,40,167,108,76,156,200,166,75,188,96,157,134,67,80,135,114,56,1663,	0,33571,35940,39738,46713,49391,49980,52441,83491,101984,102928,103556,113838,120045,122935,135632,137938,158837,160567,164379,164868,
#Deleted in new
chr17_KI270908v1_alt	1110431	1160379	chr17_KI270908v1_alt:1110431-1160379	0	+	1110452	1157106	789624	6	33,86,100,167,108,54,	0,33485,35854,46627,49305,49894,
#Deleted in new
chr17_KI270908v1_alt	1110436	1150316	chr17_KI270908v1_alt:1110436-1150316	0	+	1110436	1110436	8553170	4	28,86,100,233,	0,33480,35849,39647,
#Deleted in new
chr17_KI270908v1_alt	1110452	1224280	chr17_KI270908v1_alt:1110452-1224280	7	+	1110452	1110452	16724991	13	12,86,100,40,167,108,76,156,200,166,75,188,97,	0,33464,35833,39631,46606,49284,49873,52334,83384,101877,102821,103449,113731,
#Deleted in new
chr17_KI270908v1_alt	1110697	1146336	chr17_KI270908v1_alt:1110697-1146336	0	+	1143919	1146336	789624	3	227,86,51,	0,33219,35588,
#Deleted in new
chr17_KI270908v1_alt	1122117	1159830	chr17_KI270908v1_alt:1122117-1159830	0	+	1143919	1159830	789624	6	82,86,100,40,167,94,	0,21799,24168,27966,34941,37619,
#Deleted in new
chr17_KI270908v1_alt	1143708	1275471	chr17_KI270908v1_alt:1143708-1275471	1	+	1143919	1275235	789624	20	294,100,40,167,108,76,156,200,166,75,188,96,157,134,67,80,135,114,56,258,	0,2577,6375,13350,16028,16617,19078,50128,68621,69565,70193,80475,86682,89572,102269,104575,125474,127204,131016,131505,
#Deleted in new
chr17_KI270908v1_alt	1232576	1270993	chr17_KI270908v1_alt:1232576-1270993	0	+	1232576	1232576	8553170	6	213,134,67,80,135,81,	0,704,13401,15707,36606,38336,
#Deleted in new
chr17_KI270908v1_alt	1241010	1241596	chr17_KI270908v1_alt:1241010-1241596	7	-	1241010	1241010	16724991	1	586,	0,
#Deleted in new
chr17_KI270908v1_alt	1245984	1275249	chr17_KI270908v1_alt:1245984-1275249	0	+	1245984	1275006	789624	7	60,80,135,114,56,99,36,	0,2299,23198,24928,28740,28925,29229,
#Deleted in new
chr17_KI270908v1_alt	1281917	1338200	chr17_KI270908v1_alt:1281917-1338200	3	-	1287732	1338037	789624	5	2117,488,266,242,243,	0,5807,7277,11157,56040,
#Deleted in new
chr17_KI270908v1_alt	1293248	1352456	chr17_KI270908v1_alt:1293248-1352456	0	-	1293248	1293248	8553170	4	68,106,115,270,	0,47299,57622,58938,
#Deleted in new
chr17_KI270908v1_alt	1350017	1352481	chr17_KI270908v1_alt:1350017-1352481	0	-	1350017	1350017	8553170	3	324,115,295,	0,853,2169,
#Deleted in new
chr17_KI270908v1_alt	1350827	1352577	chr17_KI270908v1_alt:1350827-1352577	0	-	1350827	1350827	8553170	2	158,391,	0,1359,
#Deleted in new
chr17_KI270908v1_alt	1352623	1394563	chr17_KI270908v1_alt:1352623-1394563	0	+	1352768	1394563	789624	3	240,257,46,	0,39310,41894,
#Deleted in new
chr17_KI270908v1_alt	1371000	1396384	chr17_KI270908v1_alt:1371000-1396384	1	+	1371053	1396135	789624	4	130,257,266,723,	0,20933,23517,24661,
#Deleted in new
chr17_KI270908v1_alt	1371000	1406147	chr17_KI270908v1_alt:1371000-1406147	3	+	1371053	1404536	789624	5	130,257,266,304,1697,	0,20933,23517,24661,33450,
#Deleted in new
chr17_KI270909v1_alt	18376	26129	chr17_KI270909v1_alt:18376-26129	3	+	18439	25138	0	3	130,112,1082,	0,6167,6671,
#Deleted in new
chr17_KI270909v1_alt	24470	25578	chr17_KI270909v1_alt:24470-25578	0	+	24470	24470	8553170	2	185,531,	0,577,
#Deleted in new
chr17_KI270909v1_alt	26962	43954	chr17_KI270909v1_alt:26962-43954	3	+	26962	26962	8553170	4	83,213,93,312,	0,1770,2417,16680,
#Deleted in new
chr17_KI270909v1_alt	26974	35609	chr17_KI270909v1_alt:26974-35609	1	+	26974	26974	8553170	5	71,16,213,93,17,	0,778,1758,3832,8618,
#Deleted in new
chr17_KI270909v1_alt	42352	44238	chr17_KI270909v1_alt:42352-44238	3	-	42768	44155	0	3	507,115,156,	0,927,1730,
#Deleted in new
chr17_KI270909v1_alt	42352	44266	chr17_KI270909v1_alt:42352-44266	0	-	42352	42352	8553170	2	507,987,	0,927,
#Deleted in new
chr17_KI270909v1_alt	42389	44231	chr17_KI270909v1_alt:42389-44231	0	-	42389	42389	8553170	2	314,803,	0,1039,
#Deleted in new
chr17_KI270909v1_alt	42389	44231	chr17_KI270909v1_alt:42389-44231	1	+	42389	42389	8553170	2	319,796,	0,1046,
#Deleted in new
chr17_KI270909v1_alt	57923	59718	chr17_KI270909v1_alt:57923-59718	1	+	58002	59404	789624	2	155,397,	0,1398,
#Deleted in new
chr17_KI270909v1_alt	57923	59718	chr17_KI270909v1_alt:57923-59718	3	+	58002	59409	0	3	155,115,397,	0,701,1398,
#Deleted in new
chr17_KI270909v1_alt	64246	64544	chr17_KI270909v1_alt:64246-64544	3	+	64246	64246	8553170	1	298,	0,
#Deleted in new
chr17_KI270909v1_alt	70273	131610	chr17_KI270909v1_alt:70273-131610	3	+	70273	70273	8553170	3	41,116,313,	0,31403,61024,
#Deleted in new
chr17_KI270909v1_alt	115702	117029	chr17_KI270909v1_alt:115702-117029	7	+	115702	115702	16724991	2	138,90,	0,1237,
#Deleted in new
chr17_KI270909v1_alt	119783	130698	chr17_KI270909v1_alt:119783-130698	7	-	119783	119783	16724991	14	883,153,100,66,95,121,49,110,108,81,40,86,73,116,	0,1863,2386,2949,3399,4210,4874,6174,6613,7164,7727,9050,9298,10799,
#Deleted in new
chr17_KI270909v1_alt	130331	131613	chr17_KI270909v1_alt:130331-131613	0	+	130331	130331	8553170	2	137,316,	0,966,
#Deleted in new
chr17_KI270909v1_alt	137349	142993	chr17_KI270909v1_alt:137349-142993	1	+	137349	137349	8553170	3	385,214,460,	0,4575,5184,
#Deleted in new
chr17_KI270909v1_alt	137575	150590	chr17_KI270909v1_alt:137575-150590	3	+	137575	137575	8553170	2	159,327,	0,12688,
#Deleted in new
chr17_KI270909v1_alt	142062	150605	chr17_KI270909v1_alt:142062-150605	0	+	142062	142062	8553170	2	76,317,	0,8226,
#Deleted in new
chr17_KI270909v1_alt	149002	150892	chr17_KI270909v1_alt:149002-150892	3	-	149419	150807	789624	3	508,115,161,	0,929,1729,
#Deleted in new
chr17_KI270909v1_alt	165044	166706	chr17_KI270909v1_alt:165044-166706	1	+	165278	166706	789624	4	310,110,20,73,	0,868,1534,1589,
#Deleted in new
chr17_KI270909v1_alt	165199	167015	chr17_KI270909v1_alt:165199-167015	1	+	165278	166706	789624	3	155,115,397,	0,713,1419,
#Deleted in new
chr17_KI270909v1_alt	165199	167015	chr17_KI270909v1_alt:165199-167015	1	+	165278	166570	789624	3	155,115,515,	0,713,1301,
#Deleted in new
chr17_KI270909v1_alt	165199	167015	chr17_KI270909v1_alt:165199-167015	1	+	165278	166031	789624	2	155,1103,	0,713,
#Deleted in new
chr17_KI270909v1_alt	165199	167015	chr17_KI270909v1_alt:165199-167015	1	+	165278	166570	789624	3	155,115,545,	0,713,1271,
#Deleted in new
chr17_KI270909v1_alt	165199	167015	chr17_KI270909v1_alt:165199-167015	1	+	165278	166701	789624	2	155,382,	0,1434,
#Deleted in new
chr17_KI270909v1_alt	165199	167015	chr17_KI270909v1_alt:165199-167015	1	+	165278	166560	789624	3	155,115,576,	0,713,1240,
#Deleted in new
chr17_KI270909v1_alt	165199	167015	chr17_KI270909v1_alt:165199-167015	1	+	165278	166570	789624	3	155,115,566,	0,713,1250,
#Deleted in new
chr17_KI270909v1_alt	165199	167015	chr17_KI270909v1_alt:165199-167015	3	+	165278	166433	789624	3	155,115,586,	0,713,1230,
#Deleted in new
chr17_KI270909v1_alt	203747	205067	chr17_KI270909v1_alt:203747-205067	7	+	203747	203747	16724991	2	133,94,	0,1226,
#Deleted in new
chr17_KI270909v1_alt	207819	218734	chr17_KI270909v1_alt:207819-218734	3	-	208134	217189	789624	14	884,153,100,66,95,121,49,110,108,81,40,86,73,116,	0,1865,2384,2947,3397,4208,4872,6173,6612,7164,7727,9050,9298,10799,
#Deleted in new
chr17_KI270909v1_alt	212207	214790	chr17_KI270909v1_alt:212207-214790	0	-	212207	212207	8553170	4	65,49,110,359,	0,484,1785,2224,
#Deleted in new
chr17_KI270909v1_alt	214431	218775	chr17_KI270909v1_alt:214431-218775	0	-	214431	215022	789624	4	108,81,223,157,	0,552,1115,4187,
#Deleted in new
chr17_KI270909v1_alt	215024	218731	chr17_KI270909v1_alt:215024-218731	0	-	216578	217189	789624	6	40,40,223,86,73,113,	0,522,1521,1845,2093,3594,
#Deleted in new
chr17_KI270909v1_alt	237045	238103	chr17_KI270909v1_alt:237045-238103	7	-	237045	237045	16724991	2	508,129,	0,929,
#Deleted in new
chr17_KI270909v1_alt	250576	252466	chr17_KI270909v1_alt:250576-252466	3	-	250993	252381	789624	3	508,115,161,	0,929,1729,
#Deleted in new
chr17_KI270909v1_alt	250576	252455	chr17_KI270909v1_alt:250576-252455	0	-	250576	250576	8553170	2	508,950,	0,929,
#Deleted in new
chr17_KI270909v1_alt	250703	252165	chr17_KI270909v1_alt:250703-252165	0	-	250703	250703	8553170	3	381,115,52,	0,802,1410,
#Deleted in new
chr17_KI270909v1_alt	266765	268581	chr17_KI270909v1_alt:266765-268581	1	+	266844	268272	789624	3	155,115,397,	0,713,1419,
#Deleted in new
chr17_KI270909v1_alt	266765	268581	chr17_KI270909v1_alt:266765-268581	1	+	266844	268267	789624	2	155,382,	0,1434,
#Deleted in new
chr17_KI270909v1_alt	266765	268581	chr17_KI270909v1_alt:266765-268581	1	+	266844	268136	789624	3	155,115,545,	0,713,1271,
#Deleted in new
chr17_KI270909v1_alt	266765	268581	chr17_KI270909v1_alt:266765-268581	1	+	266844	268272	789624	3	155,115,382,	0,713,1434,
#Deleted in new
chr17_KI270909v1_alt	266765	268581	chr17_KI270909v1_alt:266765-268581	1	+	266844	267999	789624	3	155,115,586,	0,713,1230,
#Deleted in new
chr17_KI270909v1_alt	266765	268581	chr17_KI270909v1_alt:266765-268581	1	+	266844	268126	789624	3	155,115,576,	0,713,1240,
#Deleted in new
chr17_KI270909v1_alt	266765	268581	chr17_KI270909v1_alt:266765-268581	1	+	266844	268126	789624	2	155,586,	0,1230,
#Deleted in new
chr17_KI270909v1_alt	266765	268581	chr17_KI270909v1_alt:266765-268581	1	+	266844	268136	789624	3	155,115,566,	0,713,1250,
#Deleted in new
chr17_KI270909v1_alt	266765	268581	chr17_KI270909v1_alt:266765-268581	3	+	266844	268136	789624	3	155,115,515,	0,713,1301,
#Deleted in new
chr17_KI270909v1_alt	280989	282550	chr17_KI270909v1_alt:280989-282550	3	-	280989	280989	8553170	2	124,123,	0,1438,
#Deleted in new
chr17_KI270909v1_alt	290187	290292	chr17_KI270909v1_alt:290187-290292	7	-	290187	290187	16724991	1	105,	0,
#Deleted in new
chr17_KI270909v1_alt	297441	297541	chr17_KI270909v1_alt:297441-297541	7	+	297441	297441	16724991	1	100,	0,
#Deleted in new
chr17_KI270909v1_alt	309381	320313	chr17_KI270909v1_alt:309381-320313	3	-	309696	318728	789624	14	884,153,100,66,95,121,49,110,108,81,40,86,73,156,	0,1846,2369,2932,3382,4190,4854,6151,6590,7141,7704,9027,9275,10776,
#Deleted in new
chr17_KI270909v1_alt	309381	320257	chr17_KI270909v1_alt:309381-320257	1	-	311266	318728	789624	12	884,153,95,121,49,110,108,81,40,86,73,100,	0,1846,3382,4190,4854,6151,6590,7141,7704,9027,9275,10776,
#Deleted in new
chr17_KI270909v1_alt	311266	320313	chr17_KI270909v1_alt:311266-320313	1	-	311266	318728	789624	11	114,95,121,49,110,108,81,40,86,73,156,	0,1497,2305,2969,4266,4705,5256,5819,7142,7390,8891,
#Deleted in new
chr17_KI270910v1_alt	17545	18709	chr17_KI270910v1_alt:17545-18709	0	-	17545	17545	8553170	2	332,144,	0,1020,
#Deleted in new
chr17_KI270910v1_alt	18565	19017	chr17_KI270910v1_alt:18565-19017	3	-	18565	18925	789624	1	452,	0,
#Deleted in new
chr17_KI270910v1_alt	18565	18596	chr17_KI270910v1_alt:18565-18596	0	-	18565	18565	8553170	1	31,	0,
#Deleted in new
chr17_KI270910v1_alt	36363	42918	chr17_KI270910v1_alt:36363-42918	3	+	36389	40335	789624	4	264,197,73,2660,	0,1662,2395,3895,
#Deleted in new
chr17_KI270910v1_alt	42765	140752	chr17_KI270910v1_alt:42765-140752	0	-	45326	140752	789624	21	2651,148,106,135,140,110,60,132,98,75,105,76,123,166,122,141,53,61,108,186,99,	0,3646,6160,7210,8327,9169,9586,46345,46832,51658,52621,53555,54332,64330,67220,69865,70876,76581,80771,88916,97888,
#Deleted in new
chr17_KI270910v1_alt	42773	140752	chr17_KI270910v1_alt:42773-140752	0	-	45326	140752	789624	21	2643,148,106,135,140,110,60,132,98,75,105,76,123,166,122,141,53,61,108,186,99,	0,3638,6152,7202,8319,9161,9578,46337,46824,51650,52613,53547,54324,64322,67212,69857,70868,76573,80763,88908,97880,
#Deleted in new
chr17_KI270910v1_alt	42773	51836	chr17_KI270910v1_alt:42773-51836	0	-	42773	42773	8553170	5	2643,148,106,135,744,	0,3638,6152,7202,8319,
#Deleted in new
chr17_KI270910v1_alt	44256	71049	chr17_KI270910v1_alt:44256-71049	1	-	44296	70988	789624	5	139,49,110,60,205,	0,6927,7678,8095,26588,
#Deleted in new
chr17_KI270910v1_alt	44981	51167	chr17_KI270910v1_alt:44981-51167	0	-	45256	51167	789624	5	386,148,106,135,75,	0,1430,3944,4994,6111,
#Deleted in new
chr17_KI270910v1_alt	45037	140752	chr17_KI270910v1_alt:45037-140752	0	-	45326	140752	789624	21	379,148,106,135,140,110,60,132,98,75,105,76,123,166,122,141,53,61,108,186,99,	0,1374,3888,4938,6055,6897,7314,44073,44560,49386,50349,51283,52060,62058,64948,67593,68604,74309,78499,86644,95616,
#Deleted in new
chr17_KI270910v1_alt	45037	119163	chr17_KI270910v1_alt:45037-119163	1	-	45326	118876	789624	18	379,148,106,135,140,110,60,132,98,75,105,76,123,166,122,141,53,333,	0,1374,3888,4938,6055,6897,7314,44073,44560,49386,50349,51283,52060,62058,64948,67593,68604,73793,
#Deleted in new
chr17_KI270910v1_alt	45154	149117	chr17_KI270910v1_alt:45154-149117	1	-	45326	149085	789624	22	262,148,106,135,140,110,60,132,98,75,105,76,123,166,122,141,53,61,108,186,99,167,	0,1257,3771,4821,5938,6780,7197,43956,44443,49269,50232,51166,51943,61941,64831,67476,68487,74192,78382,86527,95499,103796,
#Deleted in new
chr17_KI270910v1_alt	45307	71085	chr17_KI270910v1_alt:45307-71085	1	-	45326	70988	789624	8	109,148,106,135,140,110,60,241,	0,1104,3618,4668,5785,6627,7044,25537,
#Deleted in new
chr17_KI270910v1_alt	45364	50635	chr17_KI270910v1_alt:45364-50635	0	-	45364	45364	8553170	5	52,148,106,135,244,	0,1047,3561,4611,5027,
#Deleted in new
chr17_KI270910v1_alt	46484	50043	chr17_KI270910v1_alt:46484-50043	0	-	46484	46484	8553170	3	75,106,372,	0,2441,3187,
#Deleted in new
chr17_KI270910v1_alt	46515	49460	chr17_KI270910v1_alt:46515-49460	0	-	46515	46515	8553170	2	44,535,	0,2410,
#Deleted in new
chr17_KI270910v1_alt	48955	52441	chr17_KI270910v1_alt:48955-52441	0	-	48955	48955	8553170	5	76,135,140,110,90,	0,1020,2137,2979,3396,
#Deleted in new
chr17_KI270910v1_alt	48962	52393	chr17_KI270910v1_alt:48962-52393	0	-	52330	52393	789624	5	69,135,140,110,103,	0,1013,2130,2972,3328,
#Deleted in new
chr17_KI270910v1_alt	48984	78844	chr17_KI270910v1_alt:48984-78844	0	-	48984	48984	8553170	6	47,135,140,110,60,59,	0,991,2108,2950,3367,29801,
#Deleted in new
chr17_KI270910v1_alt	50031	89629	chr17_KI270910v1_alt:50031-89629	0	-	51785	89629	789624	7	79,140,84,110,60,132,32,	0,1061,1689,1903,2320,39079,39566,
#Deleted in new
chr17_KI270910v1_alt	50822	71065	chr17_KI270910v1_alt:50822-71065	0	-	50822	50822	8553170	5	86,140,110,60,221,	0,270,1112,1529,20022,
#Deleted in new
chr17_KI270910v1_alt	51508	89176	chr17_KI270910v1_alt:51508-89176	0	-	51508	51508	8553170	4	296,110,60,66,	0,426,843,37602,
#Deleted in new
chr17_KI270910v1_alt	51642	71065	chr17_KI270910v1_alt:51642-71065	2	-	51642	51642	8553170	4	162,110,60,221,	0,292,709,19202,
#Deleted in new
chr17_KI270910v1_alt	89040	89634	chr17_KI270910v1_alt:89040-89634	0	-	89040	89040	8553170	2	202,37,	0,557,
#Deleted in new
chr17_KI270910v1_alt	89110	97103	chr17_KI270910v1_alt:89110-97103	0	-	96252	97103	789624	6	132,98,75,105,202,6,	0,487,5313,6276,7084,7987,
#Deleted in new
chr17_KI270910v1_alt	89154	123607	chr17_KI270910v1_alt:89154-123607	0	-	89154	89154	8553170	7	50,76,122,141,53,61,71,	0,18031,20831,23476,24487,30192,34382,
#Deleted in new
chr17_KI270910v1_alt	93671	97114	chr17_KI270910v1_alt:93671-97114	0	-	93671	93671	8553170	4	827,105,76,17,	0,1715,2649,3426,
#Deleted in new
chr17_KI270910v1_alt	107135	119139	chr17_KI270910v1_alt:107135-119139	0	-	107135	118876	789624	5	126,122,141,53,318,	0,2850,5495,6506,11686,
#Deleted in new
chr17_KI270910v1_alt	110054	123788	chr17_KI270910v1_alt:110054-123788	0	-	110054	110054	8553170	5	53,141,53,61,252,	0,2576,3587,9292,13482,
#Deleted in new
chr17_KI270910v1_alt	112749	155453	chr17_KI270910v1_alt:112749-155453	0	-	112749	140728	789624	7	22,53,61,108,186,99,161,	0,892,6597,10787,18932,27904,42543,
#Deleted in new
chr17_KI270910v1_alt	123285	131793	chr17_KI270910v1_alt:123285-131793	0	-	123285	123285	8553170	2	359,112,	0,8396,
#Deleted in new
chr17_KI270910v1_alt	123538	131867	chr17_KI270910v1_alt:123538-131867	0	-	123538	131867	789624	2	106,186,	0,8143,
#Deleted in new
chr17_KI270910v1_alt	131685	140752	chr17_KI270910v1_alt:131685-140752	0	-	131685	140752	789624	2	182,99,	0,8968,
#Deleted in new
chr17_KI270910v1_alt	131808	140752	chr17_KI270910v1_alt:131808-140752	0	-	131808	140752	789624	2	59,99,	0,8845,
#Deleted in new
chr17_KI270910v1_alt	131815	140752	chr17_KI270910v1_alt:131815-140752	0	-	131815	140752	789624	2	52,99,	0,8838,
#Deleted in new
chr17_KI270910v1_alt	141023	141290	chr17_KI270910v1_alt:141023-141290	3	-	141023	141023	8553170	1	267,	0,
#Deleted in new
chr17_KV575245v1_fix	990	10231	chr17_KV575245v1_fix:990-10231	3	+	3383	9541	789624	14	214,141,254,71,192,156,284,271,95,165,80,299,96,804,	0,440,2302,2716,2891,3175,3436,3950,6027,6456,6844,7872,8254,8437,
#Deleted in new
chr17_KV575245v1_fix	1293	10194	chr17_KV575245v1_fix:1293-10194	1	+	3383	9541	789624	13	278,254,71,192,156,284,271,95,180,80,299,96,767,	0,1999,2413,2588,2872,3133,3647,5724,6138,6541,7569,7951,8134,
#Deleted in new
chr17_KV575245v1_fix	1502	4185	chr17_KV575245v1_fix:1502-4185	0	+	1502	1502	8553170	2	69,893,	0,1790,
#Deleted in new
chr17_KV575245v1_fix	1545	3925	chr17_KV575245v1_fix:1545-3925	0	+	1545	1545	8553170	3	26,485,44,	0,1747,2336,
#Deleted in new
chr17_KV575245v1_fix	1547	4175	chr17_KV575245v1_fix:1547-4175	0	+	3383	3755	8553170	5	24,254,93,192,10,	0,1745,2137,2334,2618,
#Deleted in new
chr17_KV575245v1_fix	4703	7079	chr17_KV575245v1_fix:4703-7079	0	+	4703	4714	8553170	3	130,271,62,	0,237,2314,
#Deleted in new
chr17_KV575245v1_fix	4722	7112	chr17_KV575245v1_fix:4722-7112	0	+	4722	4722	8553170	2	489,95,	0,2295,
#Deleted in new
chr17_KV575245v1_fix	7590	9156	chr17_KV575245v1_fix:7590-9156	0	+	7590	9156	8553170	3	21,80,152,	0,244,1414,
#Deleted in new
chr17_KV575245v1_fix	10183	15299	chr17_KV575245v1_fix:10183-15299	0	-	13248	14567	8553170	7	715,162,162,43,236,56,366,	0,907,3064,3740,3874,4377,4750,
#Deleted in new
chr17_KV575245v1_fix	10183	15027	chr17_KV575245v1_fix:10183-15027	1	-	10841	14567	789624	8	715,162,162,221,43,236,56,94,	0,907,3064,3417,3740,3874,4377,4750,
#Deleted in new
chr17_KV575245v1_fix	10186	15022	chr17_KV575245v1_fix:10186-15022	0	-	10186	10186	8553170	7	712,162,162,221,43,667,89,	0,904,3061,3414,3737,3871,4747,
#Deleted in new
chr17_KV575245v1_fix	10186	14965	chr17_KV575245v1_fix:10186-14965	0	-	10186	10186	8553170	5	712,162,162,366,908,	0,904,3061,3414,3871,
#Deleted in new
chr17_KV575245v1_fix	10186	15300	chr17_KV575245v1_fix:10186-15300	1	-	11248	14567	8553170	9	712,162,162,206,14,43,236,164,367,	0,904,3061,3414,3621,3737,3871,4374,4747,
#Deleted in new
chr17_KV575245v1_fix	10186	15300	chr17_KV575245v1_fix:10186-15300	1	-	10841	14567	789624	8	712,162,162,221,43,236,164,367,	0,904,3061,3414,3737,3871,4374,4747,
#Deleted in new
chr17_KV575245v1_fix	10189	14992	chr17_KV575245v1_fix:10189-14992	1	-	10841	14567	789624	7	709,162,162,221,43,236,432,	0,901,3058,3411,3734,3868,4371,
#Deleted in new
chr17_KV575245v1_fix	10189	15264	chr17_KV575245v1_fix:10189-15264	1	-	10841	14567	789624	8	709,162,162,221,43,236,168,331,	0,901,3058,3411,3734,3868,4371,4744,
#Deleted in new
chr17_KV575245v1_fix	10190	24554	chr17_KV575245v1_fix:10190-24554	3	-	15538	24541	8553170	11	708,162,162,221,43,236,631,183,81,32,98,	0,900,3057,3410,3733,3867,4370,5174,13576,13924,14266,
#Deleted in new
chr17_KV575245v1_fix	10191	14972	chr17_KV575245v1_fix:10191-14972	0	-	10191	10191	8553170	6	707,162,162,43,559,39,	0,899,3056,3732,3866,4742,
#Deleted in new
chr17_KV575245v1_fix	10210	14725	chr17_KV575245v1_fix:10210-14725	1	-	10841	14567	8553170	7	688,162,90,221,43,236,165,	0,880,3037,3390,3713,3847,4350,
#Deleted in new
chr17_KV575245v1_fix	10506	13939	chr17_KV575245v1_fix:10506-13939	2	-	10841	13939	8553170	5	392,60,162,221,16,	0,584,2741,3094,3417,
#Deleted in new
chr17_KV575245v1_fix	10673	24554	chr17_KV575245v1_fix:10673-24554	0	-	15538	24541	789624	10	225,162,162,221,43,236,164,183,32,98,	0,417,2574,2927,3250,3384,3887,4691,13441,13783,
#Deleted in new
chr17_KV575245v1_fix	10904	14731	chr17_KV575245v1_fix:10904-14731	0	-	10904	13409	8553170	4	348,162,43,171,	0,2343,3019,3656,
#Deleted in new
chr17_KV575245v1_fix	11167	23844	chr17_KV575245v1_fix:11167-23844	0	-	15538	23844	8553170	7	85,162,43,236,164,183,78,	0,2080,2756,2890,3393,4197,12599,
#Deleted in new
chr17_KV575245v1_fix	13302	14981	chr17_KV575245v1_fix:13302-14981	0	-	13302	13409	8553170	5	107,221,43,164,48,	0,298,621,1258,1631,
#Deleted in new
chr17_KV575245v1_fix	13340	15002	chr17_KV575245v1_fix:13340-15002	0	-	13340	14567	8553170	5	69,43,236,164,69,	0,583,717,1220,1593,
#Deleted in new
chr17_KV575245v1_fix	14560	24554	chr17_KV575245v1_fix:14560-24554	0	-	15538	24541	8553170	5	168,183,81,32,98,	0,804,9206,9554,9896,
#Deleted in new
chr17_KV575245v1_fix	23431	24594	chr17_KV575245v1_fix:23431-24594	1	-	23522	24541	789624	4	235,81,32,138,	0,335,683,1025,
#Deleted in new
chr17_KV575245v1_fix	23434	23937	chr17_KV575245v1_fix:23434-23937	2	-	23434	23434	8553170	2	232,171,	0,332,
#Deleted in new
chr17_KV575245v1_fix	23439	24496	chr17_KV575245v1_fix:23439-24496	0	-	24105	24496	8553170	3	408,63,40,	0,644,1017,
#Deleted in new
chr17_KV575245v1_fix	25330	39141	chr17_KV575245v1_fix:25330-39141	3	+	28712	38256	0	8	737,701,51,150,186,193,597,1759,	0,3138,7283,9470,9789,10082,10637,12052,
#Deleted in new
chr17_KV575245v1_fix	25812	28966	chr17_KV575245v1_fix:25812-28966	0	+	25812	25812	8553170	2	255,50,	0,3104,
#Deleted in new
chr17_KV575245v1_fix	28639	40317	chr17_KV575245v1_fix:28639-40317	1	+	28712	38256	0	7	530,51,150,186,193,597,2935,	0,3974,6161,6480,6773,7328,8743,
#Deleted in new
chr17_KV575245v1_fix	29097	35585	chr17_KV575245v1_fix:29097-35585	0	+	29097	35585	8553170	4	72,150,186,173,	0,5703,6022,6315,
#Deleted in new
chr17_KV575245v1_fix	40559	64538	chr17_KV575245v1_fix:40559-64538	3	+	40559	40559	8553170	6	57,61,154,111,104,1488,	0,524,1345,21368,21673,22491,
#Deleted in new
chr17_KV575245v1_fix	40816	42089	chr17_KV575245v1_fix:40816-42089	3	+	40841	42062	789624	3	169,61,752,	0,267,521,
#Deleted in new
chr17_KV575245v1_fix	46071	48025	chr17_KV575245v1_fix:46071-48025	3	+	46145	47954	789624	3	212,58,1381,	0,378,573,
#Deleted in new
chr17_KV575245v1_fix	46097	48025	chr17_KV575245v1_fix:46097-48025	1	+	46145	47164	8553170	3	186,58,1043,	0,352,885,
#Deleted in new
chr17_KV575245v1_fix	49319	53219	chr17_KV575245v1_fix:49319-53219	3	+	49359	53219	789624	3	178,58,3395,	0,327,505,
#Deleted in new
chr17_KV575245v1_fix	55899	58136	chr17_KV575245v1_fix:55899-58136	3	+	56328	57963	789624	3	254,233,1486,	0,410,751,
#Deleted in new
chr17_KV575245v1_fix	55910	57980	chr17_KV575245v1_fix:55910-57980	1	+	56328	57963	789624	2	632,1330,	0,740,
#Deleted in new
chr17_KV575245v1_fix	57013	57980	chr17_KV575245v1_fix:57013-57980	3	-	57013	57013	8553170	2	78,249,	0,718,
#Deleted in new
chr17_KV575245v1_fix	58729	63788	chr17_KV575245v1_fix:58729-63788	1	+	62300	63603	789624	5	258,111,104,199,256,	0,3198,3503,4321,4803,
#Deleted in new
chr17_KV575245v1_fix	59483	65394	chr17_KV575245v1_fix:59483-65394	3	+	60077	63603	789624	5	787,111,104,199,1862,	0,2444,2749,3567,4049,
#Deleted in new
chr17_KV575245v1_fix	59615	63784	chr17_KV575245v1_fix:59615-63784	3	-	59615	59615	8553170	2	261,69,	0,4100,
#Deleted in new
chr17_KV575245v1_fix	59962	66423	chr17_KV575245v1_fix:59962-66423	3	+	59962	59962	8553170	3	2076,104,3373,	0,2270,3088,
#Deleted in new
chr17_KV575245v1_fix	60336	63885	chr17_KV575245v1_fix:60336-63885	1	+	62300	63603	8553170	4	1702,104,199,353,	0,1896,2714,3196,
#Deleted in new
chr17_KV575245v1_fix	61198	64013	chr17_KV575245v1_fix:61198-64013	1	+	62300	63603	8553170	5	75,131,104,199,481,	0,709,1034,1852,2334,
#Deleted in new
chr17_KV575245v1_fix	61199	65359	chr17_KV575245v1_fix:61199-65359	1	+	62300	63603	8553170	5	74,111,104,199,1827,	0,728,1033,1851,2333,
#Deleted in new
chr17_KV575245v1_fix	61229	62989	chr17_KV575245v1_fix:61229-62989	0	+	61229	61229	8553170	3	44,111,757,	0,698,1003,
#Deleted in new
chr17_KV575245v1_fix	65517	78164	chr17_KV575245v1_fix:65517-78164	1	+	65584	77180	789624	11	125,140,45,110,109,148,210,224,173,148,1125,	0,209,1008,1772,1982,2442,3518,9236,10223,10733,11522,
#Deleted in new
chr17_KV575245v1_fix	65520	67546	chr17_KV575245v1_fix:65520-67546	0	+	65584	67546	8553170	6	122,140,45,75,110,47,	0,206,1005,1334,1769,1979,
#Deleted in new
chr17_KV575245v1_fix	65564	66231	chr17_KV575245v1_fix:65564-66231	0	+	65564	65564	8553170	2	78,505,	0,162,
#Deleted in new
chr17_KV575245v1_fix	65795	76317	chr17_KV575245v1_fix:65795-76317	0	+	65795	76317	8553170	8	71,45,110,109,148,224,173,67,	0,730,1494,1704,2164,8958,9945,10455,
#Deleted in new
chr17_KV575245v1_fix	65959	77383	chr17_KV575245v1_fix:65959-77383	3	+	66543	77180	789624	10	112,45,110,109,148,210,224,173,148,344,	0,566,1330,1540,2000,3076,8794,9781,10291,11080,
#Deleted in new
chr17_KV575245v1_fix	65987	77772	chr17_KV575245v1_fix:65987-77772	1	+	66543	77180	8553170	10	84,45,110,109,148,210,77,173,148,733,	0,538,1302,1512,1972,3048,8913,9753,10263,11052,
#Deleted in new
chr17_KV575245v1_fix	65999	76146	chr17_KV575245v1_fix:65999-76146	0	+	65999	65999	8553170	6	72,874,608,210,224,406,	0,526,1500,3036,8754,9741,
#Deleted in new
chr17_KV575245v1_fix	76050	77786	chr17_KV575245v1_fix:76050-77786	1	+	77066	77180	8553170	2	348,747,	0,989,
#Deleted in new
chr17_KV575245v1_fix	79822	100082	chr17_KV575245v1_fix:79822-100082	1	-	82396	87258	789624	4	4525,1100,71,170,	0,6345,7891,20090,
#Deleted in new
chr17_KV575245v1_fix	79822	104720	chr17_KV575245v1_fix:79822-104720	3	-	82396	87258	789624	4	4525,1100,71,260,	0,6345,7891,24638,
#Deleted in new
chr17_KV575245v1_fix	101788	103953	chr17_KV575245v1_fix:101788-103953	3	+	101973	103458	789624	2	188,1509,	0,656,
#Deleted in new
chr17_KV575245v1_fix	105221	134631	chr17_KV575245v1_fix:105221-134631	1	+	105221	134631	789624	29	93,133,137,174,282,162,221,133,125,211,210,169,95,204,223,184,172,106,206,225,247,101,105,183,204,187,114,150,1154,	0,11176,11445,11675,11999,12591,12885,13313,14274,14516,15874,16175,16524,16761,17135,17753,18356,18620,18821,23486,24179,24767,26450,26641,27046,27393,27712,28009,28256,
#Deleted in new
chr17_KV575245v1_fix	105221	134631	chr17_KV575245v1_fix:105221-134631	3	+	105221	134631	8553170	29	93,133,137,174,282,162,221,133,125,211,210,169,95,204,223,184,172,106,206,225,247,101,105,183,204,187,114,150,1154,	0,11176,11445,11675,11999,12591,12885,13313,14274,14516,15874,16175,16524,16761,17135,17753,18356,18620,18821,23486,24179,24767,26450,26641,27046,27393,27712,28009,28256,
#Deleted in new
chr17_KV766196v1_fix	1830	10746	chr17_KV766196v1_fix:1830-10746	0	-	1830	1830	8553170	2	158,255,	0,8661,
#Deleted in new
chr17_KV766196v1_fix	1897	11386	chr17_KV766196v1_fix:1897-11386	0	-	1897	1897	789624	3	58,285,45,	0,8594,9444,
#Deleted in new
chr17_KV766196v1_fix	1903	7394	chr17_KV766196v1_fix:1903-7394	3	-	1903	1903	8553170	2	52,835,	0,4656,
#Deleted in new
chr17_KV766196v1_fix	7689	12029	chr17_KV766196v1_fix:7689-12029	1	+	7705	11478	789624	2	320,1519,	0,2821,
#Deleted in new
chr17_KV766196v1_fix	7699	18460	chr17_KV766196v1_fix:7699-18460	1	+	7705	18192	8553170	2	310,426,	0,10335,
#Deleted in new
chr17_KV766196v1_fix	7723	11668	chr17_KV766196v1_fix:7723-11668	2	+	7723	11420	8553170	3	286,283,309,	0,2787,3636,
#Deleted in new
chr17_KV766196v1_fix	11457	21082	chr17_KV766196v1_fix:11457-21082	0	+	11457	11478	8553170	2	259,240,	0,9385,
#Deleted in new
chr17_KV766196v1_fix	11555	28425	chr17_KV766196v1_fix:11555-28425	0	+	11555	11555	8553170	5	161,279,193,113,12,	0,6479,7942,9287,16858,
#Deleted in new
chr17_KV766196v1_fix	37340	43302	chr17_KV766196v1_fix:37340-43302	3	-	40526	43302	789624	2	3517,104,	0,5858,
#Deleted in new
chr17_KV766196v1_fix	62647	70824	chr17_KV766196v1_fix:62647-70824	3	+	62647	62647	8553170	3	126,146,221,	0,5159,7956,
#Deleted in new
chr17_KV766196v1_fix	68144	274333	chr17_KV766196v1_fix:68144-274333	1	-	78604	274186	789624	22	10631,105,138,70,149,79,83,148,243,95,102,142,143,144,79,120,116,87,67,50,81,234,	0,11158,12933,24174,28360,43204,44712,51758,53835,77602,93127,114865,118506,119420,122882,144623,147170,153141,188750,190663,201865,205955,
#Deleted in new
chr17_KV766196v1_fix	76858	274307	chr17_KV766196v1_fix:76858-274307	1	-	76884	274186	8553170	4	258,38,81,208,	0,181961,193151,197241,
#Deleted in new
chr17_KV766196v1_fix	78429	235884	chr17_KV766196v1_fix:78429-235884	0	-	78429	78429	8553170	17	346,105,138,70,149,79,83,148,243,95,150,102,142,143,144,79,228,	0,873,2648,13889,18075,32919,34427,41473,43550,67317,80992,82842,104580,108221,109135,112597,157227,
#Deleted in new
chr17_KV766196v1_fix	78595	82472	chr17_KV766196v1_fix:78595-82472	0	-	78595	78595	8553170	4	180,105,138,71,	0,707,2482,3806,
#Deleted in new
chr17_KV766196v1_fix	79331	92470	chr17_KV766196v1_fix:79331-92470	0	-	79331	79331	8553170	3	76,138,152,	0,1746,12987,
#Deleted in new
chr17_KV766196v1_fix	82616	100053	chr17_KV766196v1_fix:82616-100053	3	+	82616	82616	8553170	2	290,188,	0,17249,
#Deleted in new
chr17_KV766196v1_fix	91444	274333	chr17_KV766196v1_fix:91444-274333	0	-	192275	274186	8553170	20	944,149,79,83,148,243,95,102,142,143,144,79,98,120,116,87,67,50,81,234,	0,5060,19904,21412,28458,30535,54302,69827,91565,95206,96120,99582,100776,121323,123870,129841,165450,167363,178565,182655,
#Deleted in new
chr17_KV766196v1_fix	91794	274320	chr17_KV766196v1_fix:91794-274320	1	-	92303	274186	789624	18	594,149,79,83,148,243,95,102,142,143,144,79,120,116,67,50,81,221,	0,4710,19554,21062,28108,30185,53952,69477,91215,94856,95770,99232,120973,123520,165100,167013,178215,182305,
#Deleted in new
chr17_KV766196v1_fix	92184	274323	chr17_KV766196v1_fix:92184-274323	3	-	92303	274186	789624	19	204,149,79,83,148,243,95,102,142,143,144,79,120,116,87,67,50,81,224,	0,4320,19164,20672,27718,29795,53562,69087,90825,94466,95380,98842,120583,123130,129101,164710,166623,177825,181915,
#Deleted in new
chr17_KV766196v1_fix	92303	274186	chr17_KV766196v1_fix:92303-274186	0	-	111373	274186	8553170	18	85,149,79,30,148,243,95,102,142,143,79,120,116,87,67,50,81,87,	0,4201,19045,20606,27599,29676,53443,68968,90706,94347,98723,120464,123011,128982,164591,166504,177706,181796,
#Deleted in new
chr17_KV766196v1_fix	92303	274186	chr17_KV766196v1_fix:92303-274186	1	-	92303	274186	8553170	12	85,149,79,83,148,243,95,102,67,50,81,87,	0,4201,19045,20553,27599,29676,53443,68968,164591,166504,177706,181796,
#Deleted in new
chr17_KV766196v1_fix	95900	98681	chr17_KV766196v1_fix:95900-98681	0	-	95900	95900	8553170	1	2781,	0,
#Deleted in new
chr17_KV766196v1_fix	111110	122163	chr17_KV766196v1_fix:111110-122163	0	-	111110	111110	8553170	4	317,83,148,184,	0,1746,8792,10869,
#Deleted in new
chr17_KV766196v1_fix	112042	112894	chr17_KV766196v1_fix:112042-112894	3	+	112042	112042	8553170	2	351,241,	0,611,
#Deleted in new
chr17_KV766196v1_fix	158677	159049	chr17_KV766196v1_fix:158677-159049	1	-	158677	159049	8553170	1	372,	0,
#Deleted in new
chr17_KV766196v1_fix	158677	159049	chr17_KV766196v1_fix:158677-159049	3	-	158677	159049	8553170	1	372,	0,
#Deleted in new
chr17_KV766196v1_fix	160356	187708	chr17_KV766196v1_fix:160356-187708	0	-	160371	187708	8553170	5	198,102,142,143,144,	0,915,22653,26294,27208,
#Deleted in new
chr17_KV766196v1_fix	175478	176072	chr17_KV766196v1_fix:175478-176072	7	+	175478	175478	16724991	1	594,	0,
#Deleted in new
chr17_KV766196v1_fix	191026	244672	chr17_KV766196v1_fix:191026-244672	0	-	191026	191026	8553170	5	79,120,116,87,159,	0,21741,24288,30259,53487,
#Deleted in new
chr17_KV766196v1_fix	196454	196680	chr17_KV766196v1_fix:196454-196680	7	+	196454	196454	16724991	2	75,150,	0,76,
#Deleted in new
chr17_KV766196v1_fix	212802	281194	chr17_KV766196v1_fix:212802-281194	0	-	212802	221288	8553170	7	85,116,87,67,50,81,127,	0,2512,8483,44092,46005,57207,68265,
#Deleted in new
chr17_KV766196v1_fix	216270	217024	chr17_KV766196v1_fix:216270-217024	7	-	216270	216270	16724991	1	754,	0,
#Deleted in new
chr17_KV766196v1_fix	216905	274268	chr17_KV766196v1_fix:216905-274268	0	-	216905	216905	8553170	6	121,87,67,50,81,169,	0,4380,39989,41902,53104,57194,
#Deleted in new
chr17_KV766196v1_fix	233172	235144	chr17_KV766196v1_fix:233172-235144	0	-	233172	233172	8553170	1	1972,	0,
#Deleted in new
chr17_KV766196v1_fix	233843	235822	chr17_KV766196v1_fix:233843-235822	0	-	233843	233843	8553170	2	517,166,	0,1813,
#Deleted in new
chr17_KV766196v1_fix	256894	273990	chr17_KV766196v1_fix:256894-273990	0	-	256894	256894	8553170	4	67,50,81,372,	0,1913,13115,16724,
#Deleted in new
chr17_KV766196v1_fix	265101	274291	chr17_KV766196v1_fix:265101-274291	0	-	265101	265101	8553170	3	471,81,192,	0,4908,8998,
#Deleted in new
chr17_KV766197v1_alt	230826	231656	chr17_KV766197v1_alt:230826-231656	7	+	230826	230826	16724991	2	303,525,	0,305,
#Deleted in new
chr17_KV766198v1_alt	5209	19290	chr17_KV766198v1_alt:5209-19290	1	-	5511	19064	789624	30	437,66,106,107,129,61,155,235,140,189,192,105,172,84,75,83,180,213,137,148,85,158,176,104,162,86,81,72,111,289,	0,518,719,908,1098,1326,1472,1758,2077,2333,2821,3093,3714,3964,4291,4490,6002,6429,6844,7163,7636,8465,8708,9243,9685,9933,10347,11690,12073,13792,
#Deleted in new
chr17_KV766198v1_alt	5209	6436	chr17_KV766198v1_alt:5209-6436	0	-	5511	6436	789624	4	584,106,107,129,	0,719,908,1098,
#Deleted in new
chr17_KV766198v1_alt	5209	6342	chr17_KV766198v1_alt:5209-6342	0	-	5998	6342	789624	4	437,66,106,35,	0,518,719,1098,
#Deleted in new
chr17_KV766198v1_alt	5209	19100	chr17_KV766198v1_alt:5209-19100	1	-	5447	19064	789624	17	410,75,83,180,213,134,148,85,158,176,104,162,86,81,72,111,99,	0,4291,4490,6002,6429,6844,7163,7636,8465,8708,9243,9685,9933,10347,11690,12073,13792,
#Deleted in new
chr17_KV766198v1_alt	5214	19097	chr17_KV766198v1_alt:5214-19097	1	-	5511	19064	789624	29	432,66,106,107,129,61,155,235,140,189,192,105,172,84,75,83,180,213,134,148,85,158,176,104,86,81,72,111,96,	0,513,714,903,1093,1321,1467,1753,2072,2328,2816,3088,3709,3959,4286,4485,5997,6424,6839,7158,7631,8460,8703,9238,9928,10342,11685,12068,13787,
#Deleted in new
chr17_KV766198v1_alt	5295	19079	chr17_KV766198v1_alt:5295-19079	0	-	17407	19064	789624	30	351,66,106,107,129,61,155,235,140,189,192,105,172,84,75,83,180,213,137,148,85,158,176,104,162,86,81,72,218,78,	0,432,633,822,1012,1240,1386,1672,1991,2247,2735,3007,3628,3878,4205,4404,5916,6343,6758,7077,7550,8379,8622,9157,9599,9847,10261,11604,11987,13706,
#Deleted in new
chr17_KV766198v1_alt	5432	18930	chr17_KV766198v1_alt:5432-18930	1	-	5511	18850	789624	30	214,66,106,107,129,61,155,235,140,189,192,105,172,84,75,83,180,213,137,148,85,158,176,104,162,86,81,72,111,110,	0,295,496,685,875,1103,1249,1535,1854,2110,2598,2870,3491,3741,4068,4267,5779,6206,6621,6940,7413,8242,8485,9020,9462,9710,10124,11467,11850,13388,
#Deleted in new
chr17_KV766198v1_alt	5602	6382	chr17_KV766198v1_alt:5602-6382	0	-	5602	5602	8553170	2	44,655,	0,125,
#Deleted in new
chr17_KV766198v1_alt	5603	6574	chr17_KV766198v1_alt:5603-6574	0	-	5603	5603	8553170	4	43,66,508,39,	0,124,325,932,
#Deleted in new
chr17_KV766198v1_alt	5603	6589	chr17_KV766198v1_alt:5603-6589	0	-	5603	5603	8553170	4	190,106,319,54,	0,325,514,932,
#Deleted in new
chr17_KV766198v1_alt	5611	6688	chr17_KV766198v1_alt:5611-6688	0	-	5611	5611	8553170	6	35,66,106,107,129,153,	0,116,317,506,696,924,
#Deleted in new
chr17_KV766198v1_alt	5611	6380	chr17_KV766198v1_alt:5611-6380	0	-	5611	5611	8553170	4	35,307,107,73,	0,116,506,696,
#Deleted in new
chr17_KV766198v1_alt	5724	15025	chr17_KV766198v1_alt:5724-15025	0	-	5724	15025	789624	6	69,106,107,56,86,131,	0,204,393,583,8746,9170,
#Deleted in new
chr17_KV766198v1_alt	5727	6596	chr17_KV766198v1_alt:5727-6596	0	-	5727	5727	8553170	4	66,106,225,61,	0,201,484,808,
#Deleted in new
chr17_KV766198v1_alt	6484	7129	chr17_KV766198v1_alt:6484-7129	0	-	6484	6484	8553170	2	352,162,	0,483,
#Deleted in new
chr17_KV766198v1_alt	6526	7499	chr17_KV766198v1_alt:6526-7499	0	-	6526	6526	8553170	4	70,155,235,213,	0,155,441,760,
#Deleted in new
chr17_KV766198v1_alt	6918	7810	chr17_KV766198v1_alt:6918-7810	0	-	6918	6918	8553170	3	284,140,268,	0,368,624,
#Deleted in new
chr17_KV766198v1_alt	7549	9133	chr17_KV766198v1_alt:7549-9133	0	-	7549	7549	8553170	4	182,192,105,210,	0,481,753,1374,
#Deleted in new
chr17_KV766198v1_alt	9500	11845	chr17_KV766198v1_alt:9500-11845	0	-	9500	9500	8553170	3	75,83,634,	0,199,1711,
#Deleted in new
chr17_KV766198v1_alt	11760	14072	chr17_KV766198v1_alt:11760-14072	0	-	11760	11760	8553170	5	91,137,148,85,398,	0,293,612,1085,1914,
#Deleted in new
chr17_KV766198v1_alt	12429	15595	chr17_KV766198v1_alt:12429-15595	0	-	12429	15595	789624	8	91,85,158,176,104,99,86,39,	0,416,1245,1488,2023,2465,2713,3127,
#Deleted in new
chr17_KV766198v1_alt	12488	15012	chr17_KV766198v1_alt:12488-15012	0	-	12488	12488	8553170	5	32,85,158,639,118,	0,357,1186,1429,2406,
#Deleted in new
chr17_KV766198v1_alt	12866	15004	chr17_KV766198v1_alt:12866-15004	0	-	13813	15004	789624	5	64,158,121,104,110,	0,808,1106,1586,2028,
#Deleted in new
chr17_KV766198v1_alt	13730	19065	chr17_KV766198v1_alt:13730-19065	0	-	13730	13730	8553170	8	102,104,162,86,81,72,111,64,	0,722,1164,1412,1826,3169,3552,5271,
#Deleted in new
chr17_KV766198v1_alt	13800	14971	chr17_KV766198v1_alt:13800-14971	2	-	14539	14971	789624	4	32,176,100,77,	0,117,652,1094,
#Deleted in new
chr17_KV766198v1_alt	14260	19071	chr17_KV766198v1_alt:14260-19071	0	-	14260	14260	8553170	7	296,162,86,81,72,111,70,	0,634,882,1296,2639,3022,4741,
#Deleted in new
chr17_KV766198v1_alt	14977	17650	chr17_KV766198v1_alt:14977-17650	0	-	14977	17363	789624	6	79,86,81,72,111,153,	0,165,579,1922,2305,2520,
#Deleted in new
chr17_KV766198v1_alt	15164	17650	chr17_KV766198v1_alt:15164-17650	0	-	15164	17363	789624	4	64,81,72,368,	0,392,1735,2118,
#Deleted in new
chr17_KV766198v1_alt	16898	19079	chr17_KV766198v1_alt:16898-19079	0	-	16898	16898	8553170	2	495,78,	0,2103,
#Deleted in new
chr17_KV766198v1_alt	17407	19064	chr17_KV766198v1_alt:17407-19064	1	-	17407	19064	789624	2	93,63,	0,1594,
#Deleted in new
chr17_KV766198v1_alt	20907	26926	chr17_KV766198v1_alt:20907-26926	3	+	23094	25138	789624	4	204,154,163,2843,	0,2180,2552,3176,
#Deleted in new
chr17_KV766198v1_alt	20970	23920	chr17_KV766198v1_alt:20970-23920	1	+	23094	23833	789624	4	141,154,163,131,	0,2117,2489,2819,
#Deleted in new
chr17_KV766198v1_alt	20970	26578	chr17_KV766198v1_alt:20970-26578	1	+	23094	24465	789624	4	141,154,163,2421,	0,2117,2489,3187,
#Deleted in new
chr17_KV766198v1_alt	20977	23889	chr17_KV766198v1_alt:20977-23889	1	+	23094	23804	789624	3	134,154,430,	0,2110,2482,
#Deleted in new
chr17_KV766198v1_alt	20989	24501	chr17_KV766198v1_alt:20989-24501	0	+	20989	20989	8553170	3	58,67,418,	0,2566,3094,
#Deleted in new
chr17_KV766198v1_alt	21018	24176	chr17_KV766198v1_alt:21018-24176	1	+	23094	24102	789624	4	93,154,163,130,	0,2069,2441,3028,
#Deleted in new
chr17_KV766198v1_alt	21034	24255	chr17_KV766198v1_alt:21034-24255	0	+	23094	24255	789624	4	77,154,163,169,	0,2053,2425,3052,
#Deleted in new
chr17_KV766198v1_alt	21035	23555	chr17_KV766198v1_alt:21035-23555	0	+	21035	21035	8553170	2	76,468,	0,2052,
#Deleted in new
chr17_KV766198v1_alt	21483	26155	chr17_KV766198v1_alt:21483-26155	1	+	21509	25138	789624	4	52,154,163,2072,	0,1604,1976,2600,
#Deleted in new
chr17_KV766198v1_alt	28453	29202	chr17_KV766198v1_alt:28453-29202	3	+	28453	28453	8553170	1	749,	0,
#Deleted in new
chr17_KV766198v1_alt	31801	35332	chr17_KV766198v1_alt:31801-35332	0	-	35175	35332	789624	3	246,93,164,	0,1816,3367,
#Deleted in new
chr17_KV766198v1_alt	33211	35251	chr17_KV766198v1_alt:33211-35251	0	-	35175	35251	789624	2	499,83,	0,1957,
#Deleted in new
chr17_KV766198v1_alt	34294	75381	chr17_KV766198v1_alt:34294-75381	3	-	35175	75152	0	19	1060,683,123,144,166,114,130,186,208,83,75,101,171,144,109,76,74,60,409,	0,3754,6615,8777,11221,11486,16636,16921,18724,20782,25638,27964,28343,28659,31191,32970,34430,34961,40678,
#Deleted in new
chr17_KV766198v1_alt	34340	67533	chr17_KV766198v1_alt:34340-67533	0	-	34340	34340	8553170	13	1014,683,123,144,166,114,83,75,101,171,144,109,269,	0,3708,6569,8731,11175,11440,20736,25592,27918,28297,28613,31145,32924,
#Deleted in new
chr17_KV766198v1_alt	34340	75367	chr17_KV766198v1_alt:34340-75367	1	-	35175	75152	0	19	1014,683,123,144,166,114,130,186,208,83,75,101,171,144,109,76,74,60,395,	0,3708,6569,8731,11175,11440,16590,16875,18678,20736,25592,27918,28297,28613,31145,32924,34384,34915,40632,
#Deleted in new
chr17_KV766198v1_alt	34601	75367	chr17_KV766198v1_alt:34601-75367	0	-	67310	75152	789624	17	753,683,123,144,166,114,130,186,208,83,75,101,171,144,109,76,395,	0,3447,6308,8470,10914,11179,16329,16614,18417,20475,25331,27657,28036,28352,30884,32663,40371,
#Deleted in new
chr17_KV766198v1_alt	35097	75381	chr17_KV766198v1_alt:35097-75381	0	-	67310	75152	789624	18	257,683,123,144,166,114,130,186,208,83,75,101,171,144,109,76,60,409,	0,2951,5812,7974,10418,10683,15833,16118,17921,19979,24835,27161,27540,27856,30388,32167,34158,39875,
#Deleted in new
chr17_KV766198v1_alt	35177	75077	chr17_KV766198v1_alt:35177-75077	0	-	35177	75077	0	19	177,683,123,144,166,114,130,186,208,83,75,101,171,144,109,76,74,60,105,	0,2871,5732,7894,10338,10603,15753,16038,17841,19899,24755,27081,27460,27776,30308,32087,33547,34078,39795,
#Deleted in new
chr17_KV766198v1_alt	40548	43187	chr17_KV766198v1_alt:40548-43187	0	-	40548	40548	8553170	2	484,116,	0,2523,
#Deleted in new
chr17_KV766198v1_alt	43164	51290	chr17_KV766198v1_alt:43164-51290	0	-	45615	51290	789624	5	51,166,114,147,75,	0,2351,2616,7749,8051,
#Deleted in new
chr17_KV766198v1_alt	45801	62735	chr17_KV766198v1_alt:45801-62735	0	-	51268	62735	789624	7	93,130,186,83,75,101,98,	0,5129,5414,9275,14131,16457,16836,
#Deleted in new
chr17_KV766198v1_alt	50930	63464	chr17_KV766198v1_alt:50930-63464	0	-	50930	50930	8553170	8	130,186,208,83,75,101,171,511,	0,285,2088,4146,9002,11328,11707,12023,
#Deleted in new
chr17_KV766198v1_alt	62977	75318	chr17_KV766198v1_alt:62977-75318	0	-	67272	75152	789624	6	120,109,76,112,60,346,	0,2508,4287,5709,6278,11995,
#Deleted in new
chr17_KV766198v1_alt	63059	75304	chr17_KV766198v1_alt:63059-75304	0	-	63059	63059	8553170	5	38,76,74,60,332,	0,4205,5665,6196,11913,
#Deleted in new
chr17_KV766198v1_alt	66923	75148	chr17_KV766198v1_alt:66923-75148	0	-	66923	66923	8553170	4	417,74,60,176,	0,1801,2332,8049,
#Deleted in new
chr17_KV766198v1_alt	66961	75334	chr17_KV766198v1_alt:66961-75334	0	-	66961	66961	8553170	4	379,112,60,362,	0,1725,2294,8011,
#Deleted in new
chr17_KV766198v1_alt	67307	75348	chr17_KV766198v1_alt:67307-75348	0	-	67908	75152	789624	5	29,98,12,60,376,	0,539,1479,1948,7665,
#Deleted in new
chr17_KV766198v1_alt	67899	75343	chr17_KV766198v1_alt:67899-75343	0	-	67899	67899	8553170	4	45,112,60,371,	0,787,1356,7073,
#Deleted in new
chr17_KV766198v1_alt	67905	75344	chr17_KV766198v1_alt:67905-75344	0	-	67905	67905	8553170	4	39,74,60,372,	0,819,1350,7067,
#Deleted in new
chr17_KV766198v1_alt	69055	75186	chr17_KV766198v1_alt:69055-75186	0	-	69055	69055	8553170	2	260,214,	0,5917,
#Deleted in new
chr17_KV766198v1_alt	72277	73025	chr17_KV766198v1_alt:72277-73025	7	+	72277	72277	16724991	1	748,	0,
#Deleted in new
chr17_KV766198v1_alt	73133	73907	chr17_KV766198v1_alt:73133-73907	7	+	73133	73133	16724991	2	76,389,	0,385,
#Deleted in new
chr17_KV766198v1_alt	75683	88429	chr17_KV766198v1_alt:75683-88429	3	+	76163	83444	789624	2	2840,5439,	0,7307,
#Deleted in new
chr17_KV766198v1_alt	101187	101260	chr17_KV766198v1_alt:101187-101260	3	-	101187	101187	5263520	1	73,	0,
#Deleted in new
chr17_KV766198v1_alt	107888	116372	chr17_KV766198v1_alt:107888-116372	1	-	107888	116372	789624	3	142,146,96,	0,6160,8388,
#Deleted in new
chr17_KV766198v1_alt	107888	116372	chr17_KV766198v1_alt:107888-116372	3	-	107888	116372	789624	3	142,146,96,	0,6160,8388,
#Deleted in new
chr17_KV766198v1_alt	108620	109046	chr17_KV766198v1_alt:108620-109046	1	-	108620	109046	789624	6	87,108,30,52,62,36,	0,91,203,235,324,390,
#Deleted in new
chr17_KV766198v1_alt	108620	109046	chr17_KV766198v1_alt:108620-109046	3	-	108620	109046	789624	6	87,108,30,52,62,36,	0,91,203,235,324,390,
#Deleted in new
chr17_KV766198v1_alt	147640	159626	chr17_KV766198v1_alt:147640-159626	3	+	150916	158227	789624	11	322,99,155,128,126,39,161,108,96,70,791,	0,3240,3705,3941,4851,5164,5363,5609,5830,10557,11195,
#Deleted in new
chr17_KV766198v1_alt	149833	158963	chr17_KV766198v1_alt:149833-158963	3	-	149833	149833	8553170	2	3858,1097,	0,8033,
#Deleted in new
chr17_KV766198v1_alt	156382	159356	chr17_KV766198v1_alt:156382-159356	0	+	156382	156382	8553170	3	61,70,521,	0,1815,2453,
#Deleted in new
chr17_KV766198v1_alt	158849	159438	chr17_KV766198v1_alt:158849-159438	7	+	158849	158849	16724991	1	589,	0,
#Deleted in new
chr17_KV766198v1_alt	160131	160302	chr17_KV766198v1_alt:160131-160302	7	-	160131	160131	16724991	1	171,	0,
#Deleted in new
chr17_KV766198v1_alt	163458	170940	chr17_KV766198v1_alt:163458-170940	7	+	163458	163458	16724991	12	72,83,40,81,108,110,49,121,95,66,97,153,	0,234,1604,2116,2648,3086,4444,5019,5853,6334,6863,7329,
#Deleted in new
chr17_KV766198v1_alt	181137	184359	chr17_KV766198v1_alt:181137-184359	3	+	181137	181137	789624	2	1640,231,	0,2991,
#Deleted in new
chr17_KV766198v1_alt	185706	195074	chr17_KV766198v1_alt:185706-195074	7	+	185706	185706	16724991	8	134,79,684,633,115,237,149,302,	0,1842,4605,6453,7222,7585,8761,9066,
#Deleted in new
chr17_KV766198v1_alt	188173	188285	chr17_KV766198v1_alt:188173-188285	7	-	188173	188173	16724991	1	112,	0,
#Deleted in new
chr17_KV766198v1_alt	189945	192296	chr17_KV766198v1_alt:189945-192296	4	+	189945	189945	16724991	4	217,85,124,137,	0,366,926,2214,
#Deleted in new
chr17_KV766198v1_alt	189946	195076	chr17_KV766198v1_alt:189946-195076	5	+	189946	189946	16724991	7	216,684,884,237,78,149,304,	0,365,2213,3345,3689,4521,4826,
#Deleted in new
chr17_KV766198v1_alt	190060	191205	chr17_KV766198v1_alt:190060-191205	4	+	190060	190060	16724991	3	102,85,376,	0,251,769,
#Deleted in new
chr17_KV766198v1_alt	190107	191218	chr17_KV766198v1_alt:190107-191218	4	+	190107	190107	16724991	3	55,113,389,	0,204,722,
#Deleted in new
chr17_KV766198v1_alt	190797	194865	chr17_KV766198v1_alt:190797-194865	5	+	190797	190797	16724991	6	198,162,115,221,50,93,	0,1362,2131,2494,3769,3975,
#Deleted in new
chr17_KV766198v1_alt	194299	195076	chr17_KV766198v1_alt:194299-195076	5	+	194299	194299	16724991	2	317,304,	0,473,
#Deleted in new
chr17_KV766198v1_alt	196839	200606	chr17_KV766198v1_alt:196839-200606	5	+	196839	196839	16724991	6	501,73,244,162,126,68,	0,1557,1971,2822,3487,3699,
#Deleted in new
chr17_KV766198v1_alt	196905	201827	chr17_KV766198v1_alt:196905-201827	7	+	196905	196905	16724991	8	448,73,154,162,126,221,35,95,	0,1491,1995,2756,3421,3633,3953,4827,
#Deleted in new
chr17_KV766198v1_alt	198150	200603	chr17_KV766198v1_alt:198150-200603	4	+	198150	198150	16724991	5	319,154,162,126,65,	0,750,1511,2176,2388,
#Deleted in new
chr17_KV766198v1_alt	200205	201201	chr17_KV766198v1_alt:200205-201201	4	+	200205	200205	16724991	3	247,221,343,	0,333,653,
#Deleted in new
chr17_KV766198v1_alt	202029	211848	chr17_KV766198v1_alt:202029-211848	5	+	202029	202029	16724991	7	94,158,184,83,157,161,175,	0,7663,8283,8903,9123,9394,9644,
#Deleted in new
chr17_KV766198v1_alt	209883	212871	chr17_KV766198v1_alt:209883-212871	4	+	209883	209883	16724991	7	613,83,157,161,649,47,248,	0,1049,1269,1540,1790,2533,2740,
#Deleted in new
chr17_KV766198v1_alt	209884	210999	chr17_KV766198v1_alt:209884-210999	4	+	209884	209884	16724991	3	406,92,67,	0,520,1048,
#Deleted in new
chr17_KV766198v1_alt	209886	211278	chr17_KV766198v1_alt:209886-211278	4	+	209886	209886	16724991	4	225,129,83,126,	0,481,1046,1266,
#Deleted in new
chr17_KV766198v1_alt	209963	212713	chr17_KV766198v1_alt:209963-212713	7	+	209963	209963	16724991	8	533,83,157,161,126,221,47,90,	0,969,1189,1460,1710,2138,2453,2660,
#Deleted in new
chr17_KV766198v1_alt	212101	212874	chr17_KV766198v1_alt:212101-212874	5	+	212101	212101	16724991	2	221,458,	0,315,
#Deleted in new
chr17_KV766198v1_alt	220222	220744	chr17_KV766198v1_alt:220222-220744	5	+	220222	220222	16724991	1	522,	0,
#Deleted in new
chr17_KV766198v1_alt	220615	245899	chr17_KV766198v1_alt:220615-245899	7	+	220615	220615	16724991	2	129,233,	0,25051,
#Deleted in new
chr17_KV766198v1_alt	222933	223041	chr17_KV766198v1_alt:222933-223041	7	+	222933	222933	16724991	1	108,	0,
#Deleted in new
chr17_KV766198v1_alt	223552	223718	chr17_KV766198v1_alt:223552-223718	7	-	223552	223552	16724991	1	166,	0,
#Deleted in new
chr17_KV766198v1_alt	230369	233034	chr17_KV766198v1_alt:230369-233034	7	+	230369	230369	16724991	1	2665,	0,
#Deleted in new
chr17_KV766198v1_alt	246715	264797	chr17_KV766198v1_alt:246715-264797	1	+	246833	264278	789624	9	157,92,202,111,36,51,42,89,598,	0,7138,9197,10910,13996,14536,15211,15720,17484,
#Deleted in new
chr17_KV766198v1_alt	246734	264919	chr17_KV766198v1_alt:246734-264919	0	+	246833	256080	789624	10	138,92,131,111,96,36,51,42,89,720,	0,7119,9249,10891,12185,13977,14517,15192,15701,17465,
#Deleted in new
chr17_KV766198v1_alt	246743	262516	chr17_KV766198v1_alt:246743-262516	0	+	246833	262516	789624	5	129,92,202,111,81,	0,7110,9169,10882,15692,
#Deleted in new
chr17_KV766198v1_alt	246752	264924	chr17_KV766198v1_alt:246752-264924	1	+	246833	264346	789624	11	120,92,202,111,96,36,51,45,89,163,725,	0,7101,9160,10873,12167,13959,14499,15171,15683,15923,17447,
#Deleted in new
chr17_KV766198v1_alt	246762	264413	chr17_KV766198v1_alt:246762-264413	0	+	246833	255981	789624	10	110,202,111,96,36,51,45,89,163,214,	0,9150,10863,12157,13949,14489,15161,15673,15913,17437,
#Deleted in new
chr17_KV766198v1_alt	246774	264917	chr17_KV766198v1_alt:246774-264917	1	+	246833	264346	789624	10	98,92,202,111,36,51,42,89,163,718,	0,7079,9138,10851,13937,14477,15152,15661,15901,17425,
#Deleted in new
chr17_KV766198v1_alt	246776	264620	chr17_KV766198v1_alt:246776-264620	1	+	246833	264278	789624	8	96,92,202,111,51,42,89,421,	0,7077,9136,10849,14475,15150,15659,17423,
#Deleted in new
chr17_KV766198v1_alt	246777	256371	chr17_KV766198v1_alt:246777-256371	0	+	246777	246777	8553170	4	95,92,202,58,	0,7076,9135,9536,
#Deleted in new
chr17_KV766198v1_alt	246778	254314	chr17_KV766198v1_alt:246778-254314	0	+	246778	246778	8553170	2	94,461,	0,7075,
#Deleted in new
chr17_KV766198v1_alt	246778	264905	chr17_KV766198v1_alt:246778-264905	0	+	246833	256080	789624	10	94,92,131,111,36,51,42,89,163,706,	0,7075,9205,10847,13933,14473,15148,15657,15897,17421,
#Deleted in new
chr17_KV766198v1_alt	255733	258976	chr17_KV766198v1_alt:255733-258976	0	+	255733	255733	8553170	3	381,111,57,	0,1892,3186,
#Deleted in new
chr17_KV766198v1_alt	256030	257736	chr17_KV766198v1_alt:256030-257736	2	+	256030	256811	789624	3	84,186,111,	0,703,1595,
#Deleted in new
chr17_KV766198v1_alt	259459	264920	chr17_KV766198v1_alt:259459-264920	0	+	259459	259459	8553170	6	1288,51,42,89,163,721,	0,1792,2467,2976,3216,4740,
#Deleted in new
chr17_KV766198v1_alt	259520	264919	chr17_KV766198v1_alt:259520-264919	0	+	259520	259520	8553170	4	1782,42,403,720,	0,2406,2915,4679,
#Deleted in new
chr17_KV766198v1_alt	262147	262718	chr17_KV766198v1_alt:262147-262718	0	+	262147	262147	8553170	2	377,115,	0,456,
#Deleted in new
chr17_KV766198v1_alt	267073	276292	chr17_KV766198v1_alt:267073-276292	7	-	267073	267073	16724991	5	580,149,87,208,635,	0,3221,4341,5980,8584,
#Deleted in new
chr17_KV766198v1_alt	267545	273261	chr17_KV766198v1_alt:267545-273261	5	-	267545	267545	16724991	6	108,193,149,122,87,208,	0,1629,2749,3348,3869,5508,
#Deleted in new
chr17_KZ559114v1_alt	5708	6388	chr17_KZ559114v1_alt:5708-6388	3	+	5708	5708	8553170	2	259,365,	0,315,
#Deleted in new
chr18	11102	15822	chr18:11102-15822	0	+	11102	11102	8553170	2	493,206,	0,4514,
#Deleted in new
chr18	11190	15928	chr18:11190-15928	3	+	11190	11190	8553170	3	405,203,312,	0,1961,4426,
#Deleted in new
chr18	14194	14958	chr18:14194-14958	3	-	14194	14194	8553170	2	459,108,	0,656,
#Deleted in new
chr18	14489	16898	chr18:14489-16898	0	-	14489	14489	8553170	2	164,43,	0,2366,
#Deleted in new
chr18	45033	46047	chr18:45033-46047	7	+	45033	45033	16724991	4	202,274,147,140,	0,249,607,874,
#Deleted in new
chr18	47389	49557	chr18:47389-49557	3	-	47389	49557	789624	4	1058,111,109,57,	0,1550,1739,2111,
#Deleted in new
chr18	47927	48882	chr18:47927-48882	0	-	47927	47927	8553170	2	688,130,	0,825,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	49899	73545	chr18:49899-73545	1	-	49899	49899	8553170	2	326,234,	0,23412,
#Partially deleted in new
chr18	80139	88570	chr18:80139-88570	7	-	80139	80139	16724991	8	314,106,182,114,172,112,137,111,	0,3903,4589,5448,5971,6258,6790,8320,
#Deleted in new
chr18	94201	94330	chr18:94201-94330	7	-	94201	94201	16724991	1	129,	0,
#Partially deleted in new
chr18	109064	122219	chr18:109064-122219	7	+	109064	109064	16724991	5	389,79,262,208,1519,	0,7777,7978,9232,11636,
#Deleted in new
chr18	112255	112339	chr18:112255-112339	3	-	112255	112255	5263520	1	84,	0,
#Partially deleted in new
chr18	112366	118327	chr18:112366-118327	4	+	112366	112366	16724991	4	188,79,262,31,	0,4475,4676,5930,
#Partially deleted in new
chr18	116841	118504	chr18:116841-118504	5	+	116841	116841	16724991	3	79,262,208,	0,201,1455,
#Partially deleted in new
chr18	158382	211391	chr18:158382-211391	1	+	158698	211284	0	15	332,146,33,104,59,131,81,86,115,66,93,129,61,108,259,	0,4925,8404,21853,34459,38254,39233,39664,40819,44497,44715,46181,51588,52003,52750,
#Partially deleted in new
chr18	158535	211350	chr18:158535-211350	1	+	158698	211284	0	15	179,146,105,104,59,131,81,86,115,66,93,129,61,108,218,	0,4772,20397,21700,34306,38101,39080,39511,40666,44344,44562,46028,51435,51850,52597,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	158556	163431	chr18:158556-163431	0	+	163369	163431	789624	3	158,192,124,	0,4426,4751,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr18	158560	212601	chr18:158560-212601	0	+	158560	158560	8553170	14	154,146,33,104,59,131,81,86,115,66,93,129,523,1469,	0,4747,8226,21675,34281,38076,39055,39486,40641,44319,44537,46003,51410,52572,
#Partially deleted in new
chr18	158590	211997	chr18:158590-211997	1	+	158698	211284	789624	14	124,146,104,59,131,81,86,115,66,93,129,61,108,865,	0,4717,21645,34251,38046,39025,39456,40611,44289,44507,45973,51380,51795,52542,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr18	158607	214629	chr18:158607-214629	3	+	158698	211284	0	16	107,146,33,105,104,59,131,81,86,115,66,93,129,61,108,3497,	0,4700,8179,20325,21628,34234,38029,39008,39439,40594,44272,44490,45956,51363,51778,52525,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	158857	163454	chr18:158857-163454	0	+	163369	163454	789624	3	164,192,147,	0,4125,4450,
#Partially deleted in new
chr18	163392	198110	chr18:163392-198110	0	+	163392	178939	789624	6	61,137,104,131,81,64,	0,15508,16843,33244,34223,34654,
#Partially deleted in new
chr18	196538	211268	chr18:196538-211268	0	+	196538	196538	8553170	10	229,81,86,115,66,93,129,61,108,136,	0,1077,1508,2663,6341,6559,8025,13432,13847,14594,
#Partially deleted in new
chr18	214519	268019	chr18:214519-268019	0	-	214519	214519	8553170	20	402,76,148,84,66,96,71,315,101,132,109,74,83,96,49,119,67,61,74,54,	0,909,1966,4366,8920,9564,10404,10569,12281,31804,33329,38019,39753,44660,45162,45666,49506,50783,50937,53446,
#Partially deleted in new
chr18	214520	268027	chr18:214520-268027	3	-	214625	268019	0	21	401,76,148,84,66,96,71,51,67,101,132,109,74,83,96,49,119,67,61,74,62,	0,908,1965,4365,8919,9563,10403,10568,10816,12280,31803,33328,38018,39752,44659,45161,45665,49505,50782,50936,53445,
#Deleted in new
chr18	214520	215778	chr18:214520-215778	0	-	214520	214520	8553170	2	401,350,	0,908,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr18	214520	261162	chr18:214520-261162	0	-	214520	214520	8553170	17	401,76,148,84,66,96,71,51,67,101,132,109,74,83,96,49,977,	0,908,1965,4365,8919,9563,10403,10568,10816,12280,31803,33328,38018,39752,44659,45161,45665,
#Partially deleted in new
chr18	214520	268022	chr18:214520-268022	0	-	246436	268019	789624	21	401,76,148,84,66,96,71,51,67,101,132,60,74,83,96,49,119,67,61,74,57,	0,908,1965,4365,8919,9563,10403,10568,10816,12280,31803,33328,38018,39752,44659,45161,45665,49505,50782,50936,53445,
#Partially deleted in new
chr18	214520	245734	chr18:214520-245734	0	-	214520	214520	8553170	10	401,76,148,84,66,96,71,315,101,1433,	0,908,1965,4365,8919,9563,10403,10568,12280,29781,
#Partially deleted in new
chr18	214521	226402	chr18:214521-226402	0	-	214521	214521	8553170	8	400,76,148,84,66,96,71,1314,	0,907,1964,4364,8918,9562,10402,10567,
#Partially deleted in new
chr18	214521	268019	chr18:214521-268019	1	-	214625	268019	789624	21	400,76,148,84,66,101,66,51,67,101,132,109,74,83,96,49,119,67,61,74,54,	0,907,1964,4364,8918,9562,10407,10567,10815,12279,31802,33327,38017,39751,44658,45160,45664,49504,50781,50935,53444,
#Partially deleted in new
chr18	214521	268019	chr18:214521-268019	1	-	259266	268019	789624	20	400,76,148,84,66,96,71,51,67,101,132,109,74,83,96,49,119,61,74,54,	0,907,1964,4364,8918,9562,10402,10567,10815,12279,31802,33327,38017,39751,44658,45160,45664,50781,50935,53444,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	216208	219006	chr18:216208-219006	0	-	216208	216208	8553170	2	425,121,	0,2677,
#Partially deleted in new
chr18	216485	246433	chr18:216485-246433	0	-	216485	246433	789624	9	148,84,66,117,71,51,67,101,110,	0,2400,6954,7598,8438,8603,8851,10315,29838,
#Partially deleted in new
chr18	224083	247951	chr18:224083-247951	0	-	224083	224083	8553170	5	96,480,101,132,103,	0,840,2717,22240,23765,
#Partially deleted in new
chr18	225288	265536	chr18:225288-265536	1	-	225288	265536	789624	13	115,101,132,109,74,83,96,49,119,67,61,74,3,	0,1512,21035,22560,27250,28984,33891,34393,34897,38737,40014,40168,40245,
#Partially deleted in new
chr18	244947	268027	chr18:244947-268027	0	-	244947	244947	8553170	12	885,132,109,74,83,96,49,119,67,61,74,62,	0,1376,2901,7591,9325,14232,14734,15238,19078,20355,20509,23018,
#Partially deleted in new
chr18	246067	252577	chr18:246067-252577	0	-	246317	252577	789624	3	388,109,39,	0,1781,6471,
#Partially deleted in new
chr18	254280	268050	chr18:254280-268050	0	-	259266	268019	789624	7	75,96,49,119,61,74,85,	0,4899,5401,5905,11022,11176,13685,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	259179	268045	chr18:259179-268045	0	-	260754	268019	789624	8	96,49,119,42,67,61,74,80,	0,502,1006,1538,4846,6123,6277,8786,
#Deleted in new
chr18	259235	260218	chr18:259235-260218	0	-	259235	259235	8553170	2	40,537,	0,446,
#Partially deleted in new
chr18	263492	268019	chr18:263492-268019	0	-	263492	263492	8553170	4	600,61,74,54,	0,1810,1964,4473,
#Partially deleted in new
chr18	264939	268019	chr18:264939-268019	0	-	264939	264939	8553170	3	424,74,54,	0,517,3026,
#Partially deleted in new
chr18	265088	268019	chr18:265088-268019	0	-	265088	265088	8553170	2	442,54,	0,2877,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	268147	270278	chr18:268147-270278	3	+	268147	268147	8553170	1	2131,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	316736	319165	chr18:316736-319165	3	+	316736	316736	8553170	2	250,298,	0,2131,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	316739	500722	chr18:316739-500722	3	-	320044	500514	0	10	3325,146,110,137,489,1047,99,123,51,215,	0,4922,14928,16267,18002,29555,31325,40660,163967,183768,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	316739	317366	chr18:316739-317366	0	-	316739	316739	8553170	2	224,268,	0,359,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	319360	500722	chr18:319360-500722	0	-	319360	319360	8553170	9	704,146,110,2224,1047,99,123,51,215,	0,2301,12307,13646,26934,28704,38039,161346,181147,
#Deleted in new
chr18	423743	424416	chr18:423743-424416	3	-	423743	423743	8553170	2	313,141,	0,532,
#Partially deleted in new
chr18	508567	515294	chr18:508567-515294	3	-	508567	508567	789624	3	240,60,200,	0,6128,6527,
#Deleted in new
chr18	580356	582114	chr18:580356-582114	3	+	580408	580927	789624	1	1758,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	586516	586850	chr18:586516-586850	3	-	586516	586516	8553170	1	334,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	596987	619320	chr18:596987-619320	0	+	607079	619320	789624	5	142,83,122,119,108,	0,1512,9990,21000,22225,
#Partially deleted in new
chr18	596997	650298	chr18:596997-650298	3	+	618000	649901	789624	9	132,119,149,168,433,138,215,188,401,	0,20990,22215,27867,30099,36300,44329,47912,52900,
#Partially deleted in new
chr18	596997	627220	chr18:596997-627220	0	+	596997	596997	8553170	5	132,119,149,168,124,	0,20990,22215,27867,30099,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	596997	618087	chr18:596997-618087	0	+	596997	596997	8553170	4	132,122,147,100,	0,9980,15767,20990,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	597001	614797	chr18:597001-614797	0	+	597001	597001	8553170	3	128,122,290,	0,9976,17506,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr18	597022	650334	chr18:597022-650334	1	+	607079	649901	789624	11	107,122,123,119,149,168,433,138,215,188,437,	0,9955,16136,20965,22190,27842,30074,36275,44304,47887,52875,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	597673	645227	chr18:597673-645227	1	+	598520	645101	789624	8	909,119,149,168,433,138,215,318,	0,20314,21539,27191,29423,35624,43653,47236,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	598390	624907	chr18:598390-624907	0	+	598390	598390	8553170	5	192,122,119,149,43,	0,8587,19597,20822,26474,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	607079	650291	chr18:607079-650291	1	+	607079	649901	789624	10	20,123,119,149,168,433,138,215,188,394,	0,6079,10908,12133,17785,20017,26218,34247,37830,42818,
#Partially deleted in new
chr18	616671	650298	chr18:616671-650298	1	+	618000	649901	789624	9	86,119,149,168,433,138,215,188,401,	0,1316,2541,8193,10425,16626,24655,28238,33226,
#Partially deleted in new
chr18	616717	650182	chr18:616717-650182	1	+	618000	649901	789624	9	47,119,149,168,433,138,215,188,285,	0,1270,2495,8147,10379,16580,24609,28192,33180,
#Partially deleted in new
chr18	624955	627572	chr18:624955-627572	0	+	624955	624955	8553170	2	77,476,	0,2141,
#Partially deleted in new
chr18	641319	658269	chr18:641319-658269	0	-	641319	641319	8553170	2	132,428,	0,16522,
#Partially deleted in new
chr18	641471	650175	chr18:641471-650175	0	+	641471	649930	789624	2	70,278,	0,8426,
#Partially deleted in new
chr18	649619	658340	chr18:649619-658340	3	-	649619	649619	8553170	2	345,499,	0,8222,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	650228	652843	chr18:650228-652843	3	+	650228	650228	8553170	2	1537,569,	0,2046,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	653984	657259	chr18:653984-657259	3	-	653984	653984	8553170	2	230,38,	0,3237,
#Partially deleted in new
chr18	657603	673578	chr18:657603-673578	3	+	657742	672997	0	7	344,74,175,102,176,72,719,	0,2037,4542,11468,13088,13776,15256,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	657664	669464	chr18:657664-669464	0	+	657664	657664	8553170	4	283,74,175,393,	0,1976,4481,11407,
#Partially deleted in new
chr18	657742	673484	chr18:657742-673484	1	+	657742	672997	0	6	205,74,175,176,72,625,	0,1898,4403,12949,13637,15117,
#Partially deleted in new
chr18	657742	672997	chr18:657742-672997	1	+	657742	672997	0	5	205,102,176,72,138,	0,11329,12949,13637,15117,
#Deleted in new
chr18	658263	659689	chr18:658263-659689	0	+	658263	658263	8553170	2	485,49,	0,1377,
#Partially deleted in new
chr18	667720	673363	chr18:667720-673363	0	+	667720	667720	8553170	5	32,102,176,72,504,	0,1351,2971,3659,5139,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr18	670323	712662	chr18:670323-712662	1	-	674304	706532	0	16	2753,246,82,100,130,42,135,88,35,83,39,73,27,87,109,159,	0,3837,4997,7021,7419,8372,12922,15597,18250,20225,20744,20880,23558,23924,36146,42180,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	670323	693277	chr18:670323-693277	0	-	670323	670323	8553170	10	2753,246,82,100,130,42,135,88,35,2729,	0,3837,4997,7021,7419,8372,12922,15597,18250,20225,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr18	670323	712517	chr18:670323-712517	1	-	674304	712506	8553170	15	4083,82,100,130,135,88,35,83,39,73,27,87,116,109,158,	0,4997,7021,7419,12922,15597,18250,20225,20744,20880,23558,23924,26916,36146,42036,
#Partially deleted in new
chr18	673858	712676	chr18:673858-712676	3	-	674304	712587	0	16	548,82,100,130,42,135,88,35,83,39,73,27,87,116,109,173,	0,1462,3486,3884,4837,9387,12062,14715,16690,17209,17345,20023,20389,23381,32611,38645,
#Partially deleted in new
chr18	673899	712593	chr18:673899-712593	1	-	674304	712587	0	15	507,82,100,130,135,88,35,83,39,73,27,87,116,109,234,	0,1421,3445,3843,9346,12021,14674,16649,17168,17304,19982,20348,23340,32570,38460,
#Partially deleted in new
chr18	673913	712607	chr18:673913-712607	0	-	690553	712587	789624	14	493,82,100,130,42,135,88,35,197,27,87,116,109,104,	0,1407,3431,3829,4782,9332,12007,14660,16635,19968,20334,23326,32556,38590,
#Partially deleted in new
chr18	674000	677906	chr18:674000-677906	0	-	674000	674000	8553170	4	406,82,100,164,	0,1320,3344,3742,
#Partially deleted in new
chr18	674027	675560	chr18:674027-675560	0	-	674027	674027	8553170	2	379,240,	0,1293,
#Partially deleted in new
chr18	674038	686159	chr18:674038-686159	0	-	674038	674038	8553170	7	368,82,100,130,42,135,239,	0,1282,3306,3704,4657,9207,11882,
#Partially deleted in new
chr18	674039	712615	chr18:674039-712615	1	-	674304	712587	789624	13	367,82,100,130,42,135,88,35,83,27,87,109,112,	0,1281,3305,3703,4656,9206,11881,14534,16509,19842,20208,32430,38464,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	674160	688010	chr18:674160-688010	0	-	674160	674160	8553170	8	246,82,100,130,42,135,88,1234,	0,1160,3184,3582,4535,9085,11760,12616,
#Partially deleted in new
chr18	674160	712523	chr18:674160-712523	0	-	691229	712523	789624	15	246,82,100,130,42,135,88,35,83,39,73,27,87,109,20,	0,1160,3184,3582,4535,9085,11760,14413,16388,16907,17043,19721,20087,32309,38343,
#Partially deleted in new
chr18	674180	683380	chr18:674180-683380	0	-	674180	674180	8553170	3	226,82,135,	0,1140,9065,
#Partially deleted in new
chr18	674370	712624	chr18:674370-712624	0	-	690553	712587	789624	15	36,82,100,130,42,135,88,35,83,39,27,87,116,109,121,	0,950,2974,3372,4325,8875,11550,14203,16178,16697,19511,19877,22869,32099,38133,
#Partially deleted in new
chr18	678308	685972	chr18:678308-685972	0	-	678308	678308	8553170	3	429,135,52,	0,4937,7612,
#Partially deleted in new
chr18	682968	712611	chr18:682968-712611	0	-	682968	682968	8553170	11	412,88,35,83,39,73,27,87,116,109,108,	0,2952,5605,7580,8099,8235,10913,11279,14271,23501,29535,
#Partially deleted in new
chr18	683216	686447	chr18:683216-686447	0	-	683216	683216	8553170	2	179,527,	0,2704,
#Partially deleted in new
chr18	683330	690800	chr18:683330-690800	0	-	683330	683330	8553170	4	50,88,35,252,	0,2590,5243,7218,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	687672	712650	chr18:687672-712650	0	-	687672	687672	8553170	8	936,83,39,73,27,87,109,147,	0,2876,3395,3531,6209,6575,18797,24831,
#Partially deleted in new
chr18	688573	706789	chr18:688573-706789	0	-	688573	688573	8553170	6	35,728,27,87,116,320,	0,1975,5308,5674,8666,17896,
#Partially deleted in new
chr18	690566	712648	chr18:690566-712648	0	-	690566	712506	789624	6	65,39,73,27,87,145,	0,501,637,3315,3681,21937,
#Partially deleted in new
chr18	692922	712610	chr18:692922-712610	0	-	692922	692922	8553170	6	253,27,87,116,109,107,	0,959,1325,4317,13547,19581,
#Partially deleted in new
chr18	697266	712630	chr18:697266-712630	0	-	697266	697266	8553170	3	89,109,253,	0,9203,15111,
#Partially deleted in new
chr18	706522	707648	chr18:706522-707648	3	+	706522	706522	8553170	2	274,52,	0,1074,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr18	721587	775266	chr18:721587-775266	1	-	724423	775195	789624	12	3045,132,154,77,180,156,150,104,99,100,279,78,	0,11246,15220,18147,21330,21672,24120,24360,26332,30117,34969,53601,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr18	721587	812546	chr18:721587-812546	3	-	724423	756827	0	12	3045,132,154,77,180,156,150,104,99,100,279,163,	0,11246,15220,18147,21330,21672,24120,24360,26332,30117,34969,90796,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr18	721747	812238	chr18:721747-812238	1	-	724423	756827	0	12	2885,132,154,77,180,156,150,104,99,100,279,125,	0,11086,15060,17987,21170,21512,23960,24200,26172,29957,34809,90366,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	735745	737459	chr18:735745-737459	3	+	735745	735745	8553170	1	1714,	0,
#Partially deleted in new
chr18	738057	739444	chr18:738057-739444	3	+	738057	738057	8553170	2	357,107,	0,1280,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	738057	739662	chr18:738057-739662	3	-	738057	738057	8553170	1	1605,	0,
#Partially deleted in new
chr18	756676	812357	chr18:756676-812357	0	-	756676	756676	8553170	3	159,84,244,	0,31226,55437,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	797988	798135	chr18:797988-798135	3	-	797988	797988	8553170	1	147,	0,
#Deleted in new
chr18	813273	813756	chr18:813273-813756	3	+	813273	813273	8553170	1	483,	0,
#Partially deleted in new
chr18	832237	832469	chr18:832237-832469	7	+	832237	832237	16724991	1	232,	0,
#Partially deleted in new
chr18	856525	857045	chr18:856525-857045	7	+	856525	856525	16724991	1	520,	0,
#Partially deleted in new
chr18	894434	907680	chr18:894434-907680	3	-	894434	894434	8553170	2	261,90,	0,13156,
#Deleted in new
chr18	902765	906667	chr18:902765-906667	3	-	902765	902765	8553170	1	3902,	0,
#Deleted in new
chr18	903984	905040	chr18:903984-905040	1	-	903984	903984	8553170	3	80,200,159,	0,164,897,
#Deleted in new
chr18	903984	904481	chr18:903984-904481	0	-	903984	903984	8553170	2	80,333,	0,164,
#Deleted in new
chr18	904851	905749	chr18:904851-905749	1	-	904851	904851	8553170	2	186,287,	0,611,
#Deleted in new
chr18	904942	909903	chr18:904942-909903	1	+	905386	909635	0	5	118,111,132,99,458,	0,443,2716,3322,4503,
#Deleted in new
chr18	905108	912172	chr18:905108-912172	3	+	905386	909635	0	4	388,132,99,2727,	0,2550,3156,4337,
#Deleted in new
chr18	907550	909670	chr18:907550-909670	0	+	907550	907550	8553170	3	240,99,225,	0,714,1895,
#Deleted in new
chr18	908031	911025	chr18:908031-911025	0	+	908031	908031	8553170	2	332,1580,	0,1414,
#Partially deleted in new
chr18	926082	927993	chr18:926082-927993	3	-	926082	926082	789624	2	801,60,	0,1851,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	962591	976883	chr18:962591-976883	3	-	962591	962591	8553170	3	364,153,140,	0,518,14152,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	976588	1159391	chr18:976588-1159391	1	+	976588	976588	8553170	4	307,110,51,213,	0,157254,161225,182590,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	976589	1174804	chr18:976589-1174804	3	+	976589	976589	8553170	5	306,52,220,39,159,	0,157253,182589,186225,198056,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	976696	1159311	chr18:976696-1159311	0	+	976696	976696	8553170	5	199,73,52,51,133,	0,84766,157146,161117,182482,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	1099007	1159335	chr18:1099007-1159335	0	+	1099007	1099007	8553170	3	340,52,157,	0,34835,60171,
#Partially deleted in new
chr18	1159140	1174823	chr18:1159140-1174823	0	+	1159140	1159140	8553170	3	258,20,178,	0,3693,15505,
#Partially deleted in new
chr18	1159197	1160404	chr18:1159197-1160404	7	-	1159197	1159197	16724991	2	568,304,	0,903,
#Deleted in new
chr18	1176789	1177012	chr18:1176789-1177012	7	-	1176789	1176789	16724991	1	223,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	1254382	1359439	chr18:1254382-1359439	1	-	1254382	1254382	8553170	7	832,166,70,112,66,35,53,	0,15304,18059,21583,24185,104343,105004,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	1268310	1407180	chr18:1268310-1407180	3	-	1268310	1268310	8553170	5	1542,70,112,113,194,	0,4131,7655,100174,138676,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	1269010	1359650	chr18:1269010-1359650	0	-	1269010	1269010	789624	4	842,70,35,264,	0,3431,89715,90376,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	1269175	1359590	chr18:1269175-1359590	1	-	1269175	1269175	789624	6	677,70,173,122,35,204,	0,3266,4185,6790,89550,90211,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	1269566	1359557	chr18:1269566-1359557	0	-	1269566	1269566	789624	5	286,70,112,35,171,	0,2875,6399,89159,89820,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	1269671	1407178	chr18:1269671-1407178	0	-	1269671	1269671	8553170	4	181,70,113,192,	0,2770,98813,137315,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	1269820	1358762	chr18:1269820-1358762	0	-	1269820	1269820	8553170	4	32,70,112,37,	0,2621,6145,88905,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	1269820	1359629	chr18:1269820-1359629	0	-	1269820	1269820	789624	7	32,70,173,112,56,35,243,	0,2621,3540,6145,83586,88905,89566,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	1269820	1358762	chr18:1269820-1358762	0	-	1269820	1269820	8553170	5	32,70,173,112,37,	0,2621,3540,6145,88905,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	1323793	1324085	chr18:1323793-1324085	3	-	1323793	1323793	8553170	1	292,	0,
#Deleted in new
chr18	1357650	1357942	chr18:1357650-1357942	7	+	1357650	1357650	16724991	1	292,	0,
#Partially deleted in new
chr18	1362444	1363873	chr18:1362444-1363873	7	-	1362444	1362444	16724991	2	874,231,	0,1198,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	1368088	1408344	chr18:1368088-1408344	0	-	1368088	1368088	8553170	2	509,98,	0,40158,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	1368289	1392185	chr18:1368289-1392185	0	-	1368289	1368289	8553170	2	308,100,	0,23796,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	1509182	1647097	chr18:1509182-1647097	3	+	1509182	1509182	8553170	4	41,73,129,583,	0,57269,117056,137332,
#Partially deleted in new
chr18	1655176	1779955	chr18:1655176-1779955	3	+	1655176	1655176	8553170	3	362,46,97,	0,1273,124682,
#Deleted in new
chr18	1780328	1782064	chr18:1780328-1782064	3	+	1780328	1780328	8553170	3	161,62,351,	0,249,1385,
#Partially deleted in new
chr18	1883523	1906646	chr18:1883523-1906646	1	-	1883523	1883523	8553170	3	539,42,94,	0,2882,23029,
#Partially deleted in new
chr18	1883703	2240847	chr18:1883703-2240847	0	-	1883703	1883703	8553170	6	359,42,67,94,87,109,	0,2702,22660,22849,356089,357035,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	1927726	1929094	chr18:1927726-1929094	7	-	1927726	1927726	16724991	2	526,471,	0,897,
#Partially deleted in new
chr18	2034519	2111736	chr18:2034519-2111736	1	-	2034519	2034519	8553170	4	628,70,96,93,	0,25046,25449,77124,
#Partially deleted in new
chr18	2034678	2239880	chr18:2034678-2239880	1	-	2034678	2034678	8553170	4	469,178,44,88,	0,91521,96818,205114,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	2045944	2489426	chr18:2045944-2489426	3	-	2045944	2045944	8553170	5	1396,178,87,86,268,	0,80255,193848,289125,443214,
#Partially deleted in new
chr18	2537524	2571509	chr18:2537524-2571509	1	-	2539066	2567216	789624	8	1621,107,175,70,370,63,834,361,	0,7128,9830,15170,17144,26272,29296,33624,
#Partially deleted in new
chr18	2537529	2567613	chr18:2537529-2567613	0	-	2537529	2537529	8553170	7	1616,92,107,175,2344,63,793,	0,6665,7123,9825,15165,26267,29291,
#Partially deleted in new
chr18	2537530	2554692	chr18:2537530-2554692	0	-	2539136	2554692	789624	4	1615,175,70,24,	0,9824,15164,17138,
#Partially deleted in new
chr18	2538452	2571486	chr18:2538452-2571486	3	-	2538999	2567216	789624	9	693,92,107,175,70,370,63,834,338,	0,5742,6200,8902,14242,16216,25344,28368,32696,
#Partially deleted in new
chr18	2554785	2571233	chr18:2554785-2571233	0	-	2554785	2563814	789624	4	253,63,143,85,	0,9011,12726,16363,
#Deleted in new
chr18	2555357	2555492	chr18:2555357-2555492	3	+	2555357	2555357	8553170	1	135,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	2561171	2562220	chr18:2561171-2562220	3	-	2561171	2561171	8553170	1	1049,	0,
#Deleted in new
chr18	2566693	2567199	chr18:2566693-2567199	0	-	2566772	2567199	789624	1	506,	0,
#Partially deleted in new
chr18	2567006	2571471	chr18:2567006-2571471	0	-	2567006	2567069	789624	3	147,143,323,	0,505,4142,
#Partially deleted in new
chr18	2568391	2569122	chr18:2568391-2569122	7	+	2568391	2568391	16724991	2	79,350,	0,381,
#Partially deleted in new
chr18	2571510	2616635	chr18:2571510-2616635	3	+	2572985	2616574	0	17	173,110,78,124,173,103,90,94,107,145,206,153,90,93,131,103,199,	0,1466,3478,6235,6458,7416,13602,16319,17693,18507,23905,27508,29885,34904,37189,39248,44926,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	2577848	2582879	chr18:2577848-2582879	0	+	2577848	2582311	789624	4	21,173,103,778,	0,120,1078,4253,
#Deleted in new
chr18	2578122	2579196	chr18:2578122-2579196	0	+	2578122	2578122	8553170	2	19,270,	0,804,
#Partially deleted in new
chr18	2593673	2594913	chr18:2593673-2594913	7	-	2593673	2593673	16724991	2	207,702,	0,538,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	2610780	2615314	chr18:2610780-2615314	0	+	2610780	2614971	789624	2	81,361,	0,4173,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	2621089	2621201	chr18:2621089-2621201	3	+	2621089	2621089	8553170	1	112,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	2649760	2649867	chr18:2649760-2649867	3	-	2649760	2649760	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	2652169	2655395	chr18:2652169-2655395	7	-	2652169	2652169	16724991	2	1133,296,	0,2930,
#Partially deleted in new
chr18	2652724	2653259	chr18:2652724-2653259	5	-	2652724	2652724	16724991	1	535,	0,
#Boundary problem: need 48, got 0, diff 48, mapped 0.0
chr18	2655737	2805017	chr18:2655737-2805017	3	+	2656075	2802552	789624	48	524,76,162,83,131,115,120,167,91,211,121,184,195,114,107,83,114,78,120,145,97,73,140,135,228,149,89,119,168,126,80,158,116,65,88,132,153,127,120,86,123,191,110,71,172,159,115,2490,	0,10419,11132,17543,18277,32656,32890,38789,41294,42093,44801,44997,47954,49956,50626,51825,52069,62420,62577,66781,69161,70714,72719,73537,76527,82659,83694,84965,88023,91784,94305,94612,95540,96750,104914,106367,107899,113956,114251,115795,116512,119996,122068,122431,128712,140211,140669,146790,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	2688563	2832923	chr18:2688563-2832923	3	-	2688563	2688563	8553170	4	113,207,62,308,	0,3110,119891,144052,
#Partially deleted in new
chr18	2688640	2697216	chr18:2688640-2697216	0	+	2688640	2688640	8553170	3	107,167,185,	0,5886,8391,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	2700776	2702292	chr18:2700776-2702292	0	+	2700776	2700924	789624	2	479,76,	0,1440,
#Boundary problem: need 38, got 0, diff 38, mapped 0.0
chr18	2700858	2802929	chr18:2700858-2802929	0	+	2700858	2784879	789624	38	60,195,114,107,83,114,78,120,145,97,73,140,135,228,149,89,119,168,126,80,158,116,65,88,132,153,127,120,86,123,191,110,71,172,143,159,115,402,	0,2833,4835,5505,6704,6948,17299,17456,21660,24040,25593,27598,28416,31406,37538,38573,39844,42902,46663,49184,49491,50419,51629,59793,61246,62778,68835,69130,70674,71391,74875,76947,77310,83591,83986,95090,95548,101669,
#Partially deleted in new
chr18	2703693	2706562	chr18:2703693-2706562	0	+	2703693	2703693	8553170	3	193,114,199,	0,2000,2670,
#Partially deleted in new
chr18	2706442	2802928	chr18:2706442-2802928	0	+	2706442	2724927	789624	32	28,83,114,78,120,97,73,140,135,228,149,89,119,168,126,80,158,116,65,88,132,153,127,120,86,123,191,110,172,159,115,401,	0,1120,1364,11715,11872,18456,20009,22014,22832,25822,31954,32989,34260,37318,41079,43600,43907,44835,46045,54209,55662,57194,63251,63546,65090,65807,69291,71363,78007,89506,89964,96085,
#Partially deleted in new
chr18	2707443	2722550	chr18:2707443-2722550	0	+	2707443	2707443	8553170	5	202,114,78,120,32,	0,363,10714,10871,15075,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	2724901	2727163	chr18:2724901-2727163	0	+	2724901	2724901	8553170	2	94,712,	0,1550,
#Deleted in new
chr18	2728370	2728830	chr18:2728370-2728830	0	+	2728370	2728370	8553170	1	460,	0,
#Partially deleted in new
chr18	2728413	2739465	chr18:2728413-2739465	0	+	2728413	2728413	8553170	5	183,135,228,149,34,	0,861,3851,9983,11018,
#Partially deleted in new
chr18	2750429	2802804	chr18:2750429-2802804	0	+	2750429	2763881	789624	19	78,116,65,88,132,153,94,38,127,120,86,123,191,110,71,172,159,115,277,	0,848,2058,10222,11675,13207,13446,13639,19264,19559,21103,21820,25304,27376,27739,34020,45519,45977,52098,
#Partially deleted in new
chr18	2751378	2753129	chr18:2751378-2753129	0	+	2751378	2751378	8553170	2	15,642,	0,1109,
#Partially deleted in new
chr18	2760400	2769807	chr18:2760400-2769807	0	+	2760400	2760400	8553170	4	339,132,153,114,	0,1704,3236,9293,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	2778940	2779057	chr18:2778940-2779057	3	+	2778940	2778940	8553170	1	117,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	2796098	2801263	chr18:2796098-2801263	0	+	2796098	2800544	789624	3	9,115,741,	0,308,4424,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	2822354	2833065	chr18:2822354-2833065	1	-	2822354	2822354	8553170	2	217,450,	0,10261,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	2847029	2915993	chr18:2847029-2915993	3	+	2847188	2913404	789624	8	293,123,176,1926,303,33,129,2927,	0,779,37934,43531,59753,61913,62661,66037,
#Partially deleted in new
chr18	2906214	2914041	chr18:2906214-2914041	0	+	2906214	2906214	8553170	5	311,96,33,129,975,	0,775,2728,3476,6852,
#Partially deleted in new
chr18	2906568	2913162	chr18:2906568-2913162	0	+	2906568	2906568	8553170	4	517,33,129,96,	0,2374,3122,6498,
#Partially deleted in new
chr18	2916993	3011947	chr18:2916993-3011947	3	-	2920292	2960840	789624	20	3444,104,115,153,87,149,145,83,90,70,94,188,100,346,124,108,302,96,201,230,	0,3784,4539,5053,6781,7404,8230,9729,10728,11597,12071,14262,17357,20698,22486,23611,34061,37510,43655,94724,
#Deleted in new
chr18	2920965	2921685	chr18:2920965-2921685	3	+	2920965	2920965	8553170	1	720,	0,
#Partially deleted in new
chr18	2940604	3013315	chr18:2940604-3013315	0	-	2940604	2960840	789624	5	108,302,96,201,229,	0,10450,13899,20044,72482,
#Deleted in new
chr18	2945549	2946534	chr18:2945549-2946534	5	-	2945549	2945549	16724991	1	985,	0,
#Deleted in new
chr18	2945626	2946890	chr18:2945626-2946890	7	-	2945626	2945626	16724991	1	1264,	0,
#Partially deleted in new
chr18	2948237	2950678	chr18:2948237-2950678	0	+	2948237	2948237	8553170	2	156,417,	0,2024,
#Partially deleted in new
chr18	2948340	2960756	chr18:2948340-2960756	3	+	2948340	2948340	8553170	4	53,336,145,139,	0,1921,2853,12277,
#Partially deleted in new
chr18	2954515	2982873	chr18:2954515-2982873	0	-	2954515	2982769	789624	3	84,201,206,	0,6133,28152,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	2967017	2985410	chr18:2967017-2985410	3	+	2967017	2967017	8553170	4	25,98,108,337,	0,554,11994,18056,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	2972359	2982809	chr18:2972359-2982809	0	-	2972359	2972359	8553170	3	33,103,142,	0,4723,10308,
#Deleted in new
chr18	2990651	2991078	chr18:2990651-2991078	7	+	2990651	2990651	16724991	1	427,	0,
#Deleted in new
chr18	3025068	3025387	chr18:3025068-3025387	7	-	3025068	3025068	16724991	1	319,	0,
#Deleted in new
chr18	3025433	3025566	chr18:3025433-3025566	3	-	3025433	3025433	8553170	1	133,	0,
#Partially deleted in new
chr18	3066806	3220108	chr18:3066806-3220108	3	-	3067261	3215223	0	38	749,56,23,37,164,106,39,88,114,68,60,145,137,45,107,157,115,185,127,197,288,122,175,184,125,57,200,142,162,165,63,89,93,158,340,141,318,306,	0,5027,8647,8918,12372,16982,17182,18238,19231,22367,22730,23851,27363,33352,33513,35667,45491,49524,53062,59894,62425,64568,67843,68740,75132,82338,84887,88140,97471,102010,107131,107313,109235,120673,121941,127011,148127,152996,
#Partially deleted in new
chr18	3066807	3193954	chr18:3066807-3193954	1	-	3067261	3193840	789624	37	748,56,23,37,164,106,39,88,114,68,60,145,137,45,107,157,115,185,127,197,123,7,167,184,125,28,28,198,142,162,165,63,89,93,158,340,137,	0,5026,8646,8917,12371,16981,17181,18237,19230,22366,22729,23850,27362,33351,33512,35666,45490,49523,53061,59893,64567,67842,67850,68739,75131,82337,82366,84888,88139,97470,102009,107130,107312,109234,120672,121940,127010,
#Partially deleted in new
chr18	3066952	3219849	chr18:3066952-3219849	1	-	3067261	3215223	0	37	603,56,23,37,164,106,39,88,114,68,60,145,137,45,107,157,115,185,127,197,122,175,184,125,57,200,142,162,165,63,89,93,158,340,141,318,47,	0,4881,8501,8772,12226,16836,17036,18092,19085,22221,22584,23705,27217,33206,33367,35521,45345,49378,52916,59748,64422,67697,68594,74986,82192,84741,87994,97325,101864,106985,107167,109089,120527,121795,126865,147981,152850,
#Partially deleted in new
chr18	3067264	3075651	chr18:3067264-3075651	0	-	3067264	3067264	8553170	3	291,56,198,	0,4569,8189,
#Partially deleted in new
chr18	3075737	3090766	chr18:3075737-3090766	0	-	3084012	3090766	789624	8	24,164,106,39,114,68,60,109,	0,3441,8051,8251,10300,13436,13799,14920,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	3093567	3093629	chr18:3093567-3093629	3	+	3093567	3093567	8553170	1	62,	0,
#Partially deleted in new
chr18	3119971	3129581	chr18:3119971-3129581	0	-	3119971	3119971	8553170	3	24,197,350,	0,6729,9260,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	3135057	3142019	chr18:3135057-3142019	0	-	3135057	3135057	8553170	2	673,81,	0,6881,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	3190396	3247277	chr18:3190396-3247277	3	+	3190396	3190396	8553170	5	120,77,155,98,1321,	0,3479,26595,46044,55560,
#Deleted in new
chr18	3246400	3247086	chr18:3246400-3247086	3	-	3246400	3246400	8553170	1	686,	0,
#Partially deleted in new
chr18	3247480	3256227	chr18:3247480-3256227	3	+	3253247	3255918	789624	4	107,196,162,482,	0,5752,6408,8265,
#Partially deleted in new
chr18	3247529	3256236	chr18:3247529-3256236	1	+	3253247	3255918	789624	4	380,196,162,491,	0,5703,6359,8216,
#Partially deleted in new
chr18	3247800	3253688	chr18:3247800-3253688	0	+	3247800	3247800	8553170	2	109,456,	0,5432,
#Partially deleted in new
chr18	3247812	3256211	chr18:3247812-3256211	1	+	3253247	3255918	789624	5	97,83,196,162,466,	0,1548,5420,6076,7933,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	3247860	3249925	chr18:3247860-3249925	0	+	3247860	3247860	8553170	2	49,565,	0,1500,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	3247872	3253284	chr18:3247872-3253284	0	+	3253247	3253284	789624	4	37,83,162,52,	0,1488,1689,5360,
#Deleted in new
chr18	3247906	3248644	chr18:3247906-3248644	0	+	3247906	3247906	8553170	1	738,	0,
#Deleted in new
chr18	3252217	3254050	chr18:3252217-3254050	0	+	3253247	3254050	789624	3	265,196,162,	0,1015,1671,
#Partially deleted in new
chr18	3252274	3256235	chr18:3252274-3256235	1	+	3253247	3255918	789624	4	51,196,162,490,	0,958,1614,3471,
#Deleted in new
chr18	3252274	3253748	chr18:3252274-3253748	0	+	3252274	3252274	8553170	2	51,516,	0,958,
#Partially deleted in new
chr18	3252274	3256235	chr18:3252274-3256235	1	+	3252322	3255918	789624	4	51,196,162,490,	0,958,1614,3471,
#Partially deleted in new
chr18	3255435	3261822	chr18:3255435-3261822	3	-	3255435	3255435	789624	3	403,81,551,	0,806,5836,
#Partially deleted in new
chr18	3255437	3261850	chr18:3255437-3261850	0	-	3255437	3255437	789624	3	401,81,241,	0,804,6172,
#Deleted in new
chr18	3255523	3256126	chr18:3255523-3256126	0	+	3255523	3255523	8553170	2	82,381,	0,222,
#Partially deleted in new
chr18	3261478	3278431	chr18:3261478-3278431	3	+	3272898	3277937	8553170	4	24,199,162,667,	0,11405,15774,16286,
#Partially deleted in new
chr18	3261908	3278284	chr18:3261908-3278284	1	+	3272898	3277937	789624	4	329,199,162,520,	0,10975,15344,15856,
#Partially deleted in new
chr18	3262416	3278284	chr18:3262416-3278284	1	+	3272898	3277937	789624	4	368,199,162,520,	0,10467,14836,15348,
#Partially deleted in new
chr18	3262612	3278284	chr18:3262612-3278284	1	+	3272898	3277937	789624	4	144,199,162,520,	0,10271,14640,15152,
#Partially deleted in new
chr18	3262955	3278284	chr18:3262955-3278284	1	+	3272898	3277937	789624	4	183,199,162,520,	0,9928,14297,14809,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	3284144	3327292	chr18:3284144-3327292	3	+	3284144	3284144	8553170	2	115,749,	0,42399,
#Partially deleted in new
chr18	3347775	3350559	chr18:3347775-3350559	3	-	3347775	3347775	8553170	3	213,118,73,	0,357,2711,
#Deleted in new
chr18	3377915	3378247	chr18:3377915-3378247	7	-	3377915	3377915	16724991	1	332,	0,
#Deleted in new
chr18	3394888	3395312	chr18:3394888-3395312	7	+	3394888	3394888	16724991	1	424,	0,
#Deleted in new
chr18	3406341	3406818	chr18:3406341-3406818	7	-	3406341	3406341	16724991	1	477,	0,
#Partially deleted in new
chr18	3411607	3457684	chr18:3411607-3457684	0	+	3456397	3457684	789624	4	647,73,227,320,	0,6535,44746,45757,
#Partially deleted in new
chr18	3411926	3458406	chr18:3411926-3458406	1	+	3456397	3457940	0	4	328,73,227,1042,	0,6216,44427,45438,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	3412203	3418846	chr18:3412203-3418846	0	+	3412203	3412203	8553170	2	51,704,	0,5939,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	3412853	3457574	chr18:3412853-3457574	2	+	3456397	3457574	789624	4	196,73,227,210,	0,5289,43500,44511,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	3412855	3458406	chr18:3412855-3458406	1	+	3456397	3457940	0	4	194,73,227,1042,	0,5287,43498,44509,
#Deleted in new
chr18	3415144	3415580	chr18:3415144-3415580	7	+	3415144	3415144	16724991	1	436,	0,
#Partially deleted in new
chr18	3447608	3459978	chr18:3447608-3459978	1	+	3447739	3457940	0	3	189,227,2614,	0,8745,9756,
#Partially deleted in new
chr18	3448498	3457839	chr18:3448498-3457839	0	+	3456397	3457839	789624	3	99,227,475,	0,7855,8866,
#Partially deleted in new
chr18	3449412	3457456	chr18:3449412-3457456	0	+	3456397	3457456	789624	3	244,227,92,	0,6941,7952,
#Deleted in new
chr18	3449536	3450040	chr18:3449536-3450040	0	+	3449536	3449536	8553170	2	120,199,	0,305,
#Partially deleted in new
chr18	3449650	3458406	chr18:3449650-3458406	1	+	3456397	3457940	0	3	420,227,1042,	0,6703,7714,
#Partially deleted in new
chr18	3449703	3458411	chr18:3449703-3458411	1	+	3450489	3457940	0	3	802,227,1047,	0,6650,7661,
#Partially deleted in new
chr18	3449881	3458349	chr18:3449881-3458349	1	+	3450489	3457940	0	4	189,184,227,985,	0,440,6472,7483,
#Partially deleted in new
chr18	3450035	3457475	chr18:3450035-3457475	0	+	3450489	3457475	789624	4	35,181,227,111,	0,289,6318,7329,
#Partially deleted in new
chr18	3450176	3457113	chr18:3450176-3457113	1	+	3450489	3456736	789624	2	329,760,	0,6177,
#Partially deleted in new
chr18	3450211	3457604	chr18:3450211-3457604	1	+	3450489	3457408	789624	3	294,227,208,	0,6142,7185,
#Partially deleted in new
chr18	3451592	3457944	chr18:3451592-3457944	1	+	3456397	3457940	0	3	183,227,580,	0,4761,5772,
#Partially deleted in new
chr18	3451669	3458123	chr18:3451669-3458123	1	+	3456397	3457940	0	3	102,227,759,	0,4684,5695,
#Partially deleted in new
chr18	3451676	3458411	chr18:3451676-3458411	1	+	3451979	3457940	0	3	706,227,1047,	0,4677,5688,
#Partially deleted in new
chr18	3451723	3457918	chr18:3451723-3457918	0	+	3456397	3457918	789624	3	39,227,554,	0,4630,5641,
#Deleted in new
chr18	3453773	3458406	chr18:3453773-3458406	1	+	3456397	3457940	0	3	83,227,1042,	0,2580,3591,
#Deleted in new
chr18	3453773	3457580	chr18:3453773-3457580	0	+	3456397	3457580	789624	3	83,227,216,	0,2580,3591,
#Deleted in new
chr18	3455151	3457594	chr18:3455151-3457594	0	+	3456397	3457594	789624	3	107,227,230,	0,1202,2213,
#Deleted in new
chr18	3455413	3458411	chr18:3455413-3458411	1	+	3456397	3457940	0	2	1167,1047,	0,1951,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	3466249	3473203	chr18:3466249-3473203	1	+	3466249	3466249	8553170	3	108,144,361,	0,877,6593,
#Partially deleted in new
chr18	3466249	3478927	chr18:3466249-3478927	0	+	3466249	3466249	789624	3	108,170,172,	0,877,12506,
#Partially deleted in new
chr18	3496031	4455335	chr18:3496031-4455335	1	-	3499184	3880068	789624	13	3363,153,92,422,92,374,241,178,215,1029,86,108,330,	0,6461,12538,38162,71458,85843,233103,246303,318027,383080,509084,655148,958974,
#Partially deleted in new
chr18	3496031	3845359	chr18:3496031-3845359	1	-	3499184	3845282	789624	10	3363,153,92,422,92,374,241,178,215,128,	0,6461,12538,38162,71458,85843,233103,246303,318027,349200,
#Partially deleted in new
chr18	3496031	3874274	chr18:3496031-3874274	1	-	3499184	3874228	789624	11	3363,153,92,422,92,290,30,241,178,215,127,	0,6461,12538,38162,71458,85843,160052,233103,246303,318027,378116,
#Partially deleted in new
chr18	3496031	3874325	chr18:3496031-3874325	1	-	3499184	3874228	789624	11	3363,153,92,422,92,374,30,241,178,215,172,	0,6461,12538,38162,71458,85843,160052,233103,246303,318027,378122,
#Partially deleted in new
chr18	3496031	3874280	chr18:3496031-3874280	1	-	3499184	3874228	789624	10	3363,153,92,422,92,374,241,178,215,127,	0,6461,12538,38162,71458,85843,233103,246303,318027,378122,
#Partially deleted in new
chr18	3496031	3874767	chr18:3496031-3874767	1	-	3499184	3874706	789624	11	3363,153,92,422,92,374,30,241,178,215,154,	0,6461,12538,38162,71458,85843,160052,233103,246303,318027,378582,
#Partially deleted in new
chr18	3498866	3874767	chr18:3498866-3874767	1	-	3499184	3874706	789624	10	528,153,92,422,92,290,241,178,215,154,	0,3626,9703,35327,68623,83008,230268,243468,315192,375747,
#Partially deleted in new
chr18	3498916	3845358	chr18:3498916-3845358	3	-	3499184	3845282	789624	11	478,153,92,422,92,374,30,241,178,215,127,	0,3576,9653,35277,68573,82958,157167,230218,243418,315142,346315,
#Partially deleted in new
chr18	3499003	3874253	chr18:3499003-3874253	1	-	3499184	3874228	789624	10	391,153,92,422,92,374,241,178,215,100,	0,3489,9566,35190,68486,82871,230131,243331,315055,375150,
#Partially deleted in new
chr18	3502136	3845296	chr18:3502136-3845296	1	-	3502426	3845282	789624	9	509,92,422,92,374,241,178,215,65,	0,6433,32057,65353,79738,226998,240198,311922,343095,
#Partially deleted in new
chr18	3502218	4455266	chr18:3502218-4455266	1	-	3502426	3880068	789624	12	427,92,422,92,374,241,178,215,1029,86,108,261,	0,6351,31975,65271,79656,226916,240116,311840,376893,502897,648961,952787,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	3571214	3571511	chr18:3571214-3571511	3	-	3571214	3571214	8553170	1	297,	0,
#Deleted in new
chr18	3580168	3580754	chr18:3580168-3580754	7	+	3580168	3580168	16724991	1	586,	0,
#Partially deleted in new
chr18	3593731	3596808	chr18:3593731-3596808	0	+	3593731	3593731	8553170	3	119,65,230,	0,688,2847,
#Partially deleted in new
chr18	3594093	3597372	chr18:3594093-3597372	0	+	3594093	3594093	8553170	2	147,197,	0,3082,
#Partially deleted in new
chr18	3594111	3597372	chr18:3594111-3597372	0	+	3594111	3594111	8553170	3	129,65,197,	0,308,3064,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	3594113	3598352	chr18:3594113-3598352	3	+	3594113	3594113	789624	3	127,65,1774,	0,306,2465,
#Partially deleted in new
chr18	3594126	3597372	chr18:3594126-3597372	0	+	3594126	3594126	8553170	3	114,97,197,	0,2452,3049,
#Partially deleted in new
chr18	3594454	3597228	chr18:3594454-3597228	0	+	3594454	3594454	8553170	3	30,97,53,	0,2124,2721,
#Deleted in new
chr18	3602999	3604387	chr18:3602999-3604387	3	+	3602999	3602999	8553170	1	1388,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	3603737	3608336	chr18:3603737-3608336	1	+	3603737	3603737	8553170	2	478,1783,	0,2816,
#Deleted in new
chr18	3653409	3656282	chr18:3653409-3656282	3	+	3653409	3653409	8553170	3	570,111,774,	0,1295,2099,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	3679843	3814063	chr18:3679843-3814063	0	-	3679843	3679843	8553170	4	369,241,178,5,	0,49291,62491,134215,
#Partially deleted in new
chr18	3708341	3880076	chr18:3708341-3880076	0	-	3708341	3708341	8553170	5	160,241,178,215,965,	0,20793,33993,105717,170770,
#Partially deleted in new
chr18	3708463	4151290	chr18:3708463-4151290	1	-	3708463	3880068	789624	7	38,241,178,215,1029,86,111,	0,20671,33871,105595,170648,296652,442716,
#Partially deleted in new
chr18	3721511	3874737	chr18:3721511-3874737	0	-	3721511	3721511	8553170	5	1058,241,178,215,124,	0,7623,20823,92547,153102,
#Deleted in new
chr18	3727708	3729378	chr18:3727708-3729378	0	-	3727708	3727708	8553170	2	228,244,	0,1426,
#Deleted in new
chr18	3770016	3771430	chr18:3770016-3771430	3	-	3770016	3770016	8553170	2	50,507,	0,907,
#Partially deleted in new
chr18	3774204	3845327	chr18:3774204-3845327	0	-	3774204	3774204	8553170	3	463,215,96,	0,39854,71027,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	3878179	3897069	chr18:3878179-3897069	3	+	3878179	3878179	789624	3	112,233,913,	0,17591,17977,
#Deleted in new
chr18	3885352	3885432	chr18:3885352-3885432	3	+	3885352	3885352	5263520	1	80,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	3891931	3896658	chr18:3891931-3896658	0	+	3891931	3891931	8553170	3	74,177,502,	0,3895,4225,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	3894698	3894805	chr18:3894698-3894805	3	-	3894698	3894698	8553170	1	107,	0,
#Partially deleted in new
chr18	3962352	4013943	chr18:3962352-4013943	3	+	3962352	3962352	789624	5	78,112,133,109,325,	0,30738,32864,33255,51266,
#Deleted in new
chr18	3977648	3978615	chr18:3977648-3978615	7	-	3977648	3977648	16724991	1	967,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	3983107	4248697	chr18:3983107-4248697	0	-	3983107	3983107	8553170	5	1152,97,86,108,129,	0,3012,22008,168072,265461,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	3986416	4005259	chr18:3986416-4005259	0	-	3986416	3986416	8553170	2	238,144,	0,18699,
#Partially deleted in new
chr18	4005024	4151287	chr18:4005024-4151287	0	-	4005024	4005024	8553170	2	177,108,	0,146155,
#Partially deleted in new
chr18	4005115	4248719	chr18:4005115-4248719	0	-	4005115	4005115	8553170	3	86,108,151,	0,146064,243453,
#Partially deleted in new
chr18	4264601	4293365	chr18:4264601-4293365	0	+	4264601	4264601	8553170	3	300,37,206,	0,16128,28558,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	4264632	4295405	chr18:4264632-4295405	3	+	4264632	4264632	789624	3	269,79,2246,	0,10668,28527,
#Partially deleted in new
chr18	4264632	4293469	chr18:4264632-4293469	0	+	4264632	4264632	8553170	2	269,310,	0,28527,
#Partially deleted in new
chr18	4264632	4280982	chr18:4264632-4280982	0	+	4264632	4264632	8553170	2	269,253,	0,16097,
#Partially deleted in new
chr18	4430576	4455022	chr18:4430576-4455022	0	-	4430576	4430576	8553170	2	506,17,	0,24429,
#Deleted in new
chr18	4430944	4431152	chr18:4430944-4431152	7	+	4430944	4430944	16724991	1	208,	0,
#Deleted in new
chr18	4459229	4459458	chr18:4459229-4459458	7	+	4459229	4459229	16724991	1	229,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	4775053	5004524	chr18:4775053-5004524	0	-	4775053	4775053	8553170	5	70,257,73,29,128,	0,171828,228163,228921,229343,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	4807934	5004537	chr18:4807934-5004537	3	-	4807934	4807934	8553170	5	61,257,73,29,141,	0,138947,195282,196040,196462,
#Partially deleted in new
chr18	5002758	5003254	chr18:5002758-5003254	7	-	5002758	5002758	16724991	1	496,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	5081181	5085477	chr18:5081181-5085477	1	+	5081181	5081181	8553170	2	59,481,	0,3815,
#Partially deleted in new
chr18	5084991	5095815	chr18:5084991-5095815	3	+	5084991	5084991	8553170	2	237,270,	0,10554,
#Deleted in new
chr18	5132748	5133229	chr18:5132748-5133229	7	-	5132748	5132748	16724991	1	481,	0,
#Partially deleted in new
chr18	5145284	5197503	chr18:5145284-5197503	1	-	5145561	5197488	789624	2	471,52,	0,52167,
#Partially deleted in new
chr18	5145368	5197225	chr18:5145368-5197225	3	-	5145561	5197053	789624	2	387,188,	0,51669,
#Partially deleted in new
chr18	5159331	5171026	chr18:5159331-5171026	3	+	5159331	5159331	8553170	3	73,117,357,	0,4349,11338,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	5197164	5215497	chr18:5197164-5215497	3	+	5197164	5197164	8553170	2	246,1344,	0,16989,
#Partially deleted in new
chr18	5232875	5238526	chr18:5232875-5238526	3	-	5232875	5232875	8553170	3	635,62,280,	0,2963,5371,
#Partially deleted in new
chr18	5232875	5238526	chr18:5232875-5238526	0	-	5232875	5232875	8553170	2	327,280,	0,5371,
#Deleted in new
chr18	5236723	5238598	chr18:5236723-5238598	3	-	5236723	5236723	789624	1	1875,	0,
#Deleted in new
chr18	5237825	5239859	chr18:5237825-5239859	0	+	5237825	5237825	8553170	1	2034,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	5238083	5243936	chr18:5238083-5243936	1	+	5238083	5238083	8553170	3	966,1626,343,	0,2103,5510,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	5238099	5246508	chr18:5238099-5246508	0	+	5238099	5238099	789624	3	950,114,2915,	0,3599,5494,
#Deleted in new
chr18	5238127	5240713	chr18:5238127-5240713	0	+	5238127	5238127	8553170	2	766,66,	0,2520,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	5238549	5243911	chr18:5238549-5243911	0	+	5238549	5238549	8553170	3	500,191,318,	0,3149,5044,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	5238779	5246508	chr18:5238779-5246508	3	+	5238779	5238779	8553170	5	270,91,608,191,2915,	0,1407,1868,2919,4814,
#Deleted in new
chr18	5240254	5241167	chr18:5240254-5241167	7	-	5240254	5240254	16724991	1	913,	0,
#Deleted in new
chr18	5289018	5296040	chr18:5289018-5296040	1	-	5290857	5293246	789624	4	3186,84,30,228,	0,4225,4953,6794,
#Deleted in new
chr18	5289019	5297053	chr18:5289019-5297053	3	-	5290857	5293246	789624	4	3185,84,30,42,	0,4224,4952,7992,
#Deleted in new
chr18	5289019	5295702	chr18:5289019-5295702	1	-	5290857	5293246	789624	4	3185,84,30,51,	0,4224,4952,6632,
#Deleted in new
chr18	5290857	5296195	chr18:5290857-5296195	1	-	5290857	5293246	789624	3	1347,84,383,	0,2386,4955,
#Deleted in new
chr18	5291544	5295702	chr18:5291544-5295702	0	-	5291544	5293246	789624	4	660,84,30,51,	0,1699,2427,4107,
#Deleted in new
chr18	5291711	5297053	chr18:5291711-5297053	0	-	5291711	5293246	789624	4	493,84,30,42,	0,1532,2260,5300,
#Deleted in new
chr18	5291900	5294824	chr18:5291900-5294824	0	-	5291900	5293246	789624	4	304,84,30,24,	0,1343,2071,2900,
#Deleted in new
chr18	5292077	5293647	chr18:5292077-5293647	0	-	5292077	5292077	8553170	2	127,404,	0,1166,
#Partially deleted in new
chr18	5310395	5317664	chr18:5310395-5317664	3	+	5310395	5310395	8553170	2	57,414,	0,6855,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	5381640	5385330	chr18:5381640-5385330	3	-	5381640	5381640	8553170	2	163,300,	0,3390,
#Partially deleted in new
chr18	5392380	5544310	chr18:5392380-5544310	1	-	5394682	5489183	789624	22	1098,117,81,99,132,369,123,192,36,54,221,176,98,153,88,219,76,43,105,198,194,398,	0,2296,2686,3228,3820,4677,5640,14396,15320,18185,27330,30997,31881,35932,41088,41522,45654,51457,52759,85860,96620,151532,
#Partially deleted in new
chr18	5392380	5540556	chr18:5392380-5540556	1	-	5393472	5489183	0	21	1098,81,99,132,369,123,192,36,54,221,176,98,153,88,219,76,43,105,198,194,217,	0,2686,3228,3820,4677,5640,14396,15320,18185,27330,30997,31881,35932,41088,41522,45654,51457,52759,85860,96620,147959,
#Partially deleted in new
chr18	5392383	5544242	chr18:5392383-5544242	1	-	5394682	5489183	0	23	1095,117,81,99,132,369,123,192,36,54,561,167,176,98,153,88,219,76,43,105,198,194,330,	0,2293,2683,3225,3817,4674,5637,14393,15317,18182,23434,27327,30994,31878,35929,41085,41519,45651,51454,52756,85857,96617,151529,
#Partially deleted in new
chr18	5392385	5466363	chr18:5392385-5466363	0	-	5392385	5392385	8553170	16	1093,117,81,99,132,369,192,54,221,176,98,153,88,219,105,64,	0,2291,2681,3223,3815,4672,14391,18180,27325,30992,31876,35927,41083,41517,52754,73914,
#Deleted in new
chr18	5392385	5399566	chr18:5392385-5399566	0	-	5392385	5392385	8553170	5	2762,99,132,369,1546,	0,3223,3815,4672,5635,
#Partially deleted in new
chr18	5392432	5543967	chr18:5392432-5543967	1	-	5394682	5489183	789624	20	1046,117,81,99,132,369,123,735,75,192,36,54,221,176,98,153,105,198,194,55,	0,2244,2634,3176,3768,4625,5588,6218,8536,14344,15268,18133,27278,30945,31829,35880,52707,85808,96568,151480,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr18	5392444	5630663	chr18:5392444-5630663	0	-	5400842	5478294	789624	22	1034,117,81,99,132,369,3023,192,36,54,221,176,98,153,88,219,76,43,105,198,161,287,	0,2232,2622,3164,3756,4613,5576,14332,15256,18121,27266,30933,31817,35868,41024,41458,45590,51393,52695,85796,96556,237932,
#Partially deleted in new
chr18	5393092	5544281	chr18:5393092-5544281	1	-	5394682	5489183	0	20	386,117,81,99,132,369,192,54,221,176,98,153,88,219,76,43,105,198,194,369,	0,1584,1974,2516,3108,3965,13684,17473,26618,30285,31169,35220,40376,40810,44942,50745,52047,85148,95908,150820,
#Partially deleted in new
chr18	5393102	5628991	chr18:5393102-5628991	3	-	5394682	5478294	789624	22	376,117,81,99,132,369,192,54,221,176,98,153,88,219,76,43,105,198,161,89,73,70,	0,1574,1964,2506,3098,3955,13674,17463,26608,30275,31159,35210,40366,40800,44932,50735,52037,85138,95898,219237,221248,235819,
#Deleted in new
chr18	5394782	5396332	chr18:5394782-5396332	0	-	5395045	5396332	789624	3	365,99,132,	0,826,1418,
#Partially deleted in new
chr18	5396200	5419813	chr18:5396200-5419813	0	-	5396200	5419813	789624	6	132,369,123,192,54,103,	0,857,1820,10576,14365,23510,
#Partially deleted in new
chr18	5397157	5419800	chr18:5397157-5419800	0	-	5397157	5419800	789624	3	269,192,90,	0,9619,22553,
#Partially deleted in new
chr18	5397247	5407328	chr18:5397247-5407328	0	-	5397247	5397247	8553170	2	179,552,	0,9529,
#Partially deleted in new
chr18	5397392	5419815	chr18:5397392-5419815	0	-	5397392	5419815	789624	6	34,123,75,192,54,105,	0,628,3576,9384,13173,22318,
#Partially deleted in new
chr18	5397394	5419801	chr18:5397394-5419801	0	-	5397394	5419801	789624	6	32,123,99,192,54,91,	0,626,3102,9382,13171,22316,
#Partially deleted in new
chr18	5397397	5419794	chr18:5397397-5419794	0	-	5397397	5419794	789624	6	29,123,75,204,54,84,	0,623,3571,9367,13168,22313,
#Partially deleted in new
chr18	5398112	5423407	chr18:5398112-5423407	0	-	5398112	5423407	789624	6	31,192,36,54,221,30,	0,8664,9588,12453,21598,25265,
#Partially deleted in new
chr18	5400868	5419838	chr18:5400868-5419838	0	-	5400868	5400868	8553170	4	175,192,54,128,	0,5908,9697,18842,
#Partially deleted in new
chr18	5400996	5416151	chr18:5400996-5416151	0	-	5400996	5400996	8553170	5	47,192,36,54,334,	0,5780,6704,9569,14821,
#Partially deleted in new
chr18	5406847	5420206	chr18:5406847-5420206	0	-	5406847	5406847	8553170	4	121,54,221,165,	0,3718,12863,13194,
#Partially deleted in new
chr18	5419798	5540396	chr18:5419798-5540396	0	-	5419798	5539656	789624	5	133,176,98,78,57,	0,3579,4463,119822,120541,
#Partially deleted in new
chr18	5429247	5433556	chr18:5429247-5433556	0	-	5429247	5429247	8553170	2	138,88,	0,4221,
#Deleted in new
chr18	5431211	5434121	chr18:5431211-5434121	0	-	5431211	5431211	8553170	3	174,88,219,	0,2257,2691,
#Partially deleted in new
chr18	5445139	5489250	chr18:5445139-5489250	0	-	5445139	5489183	789624	3	105,198,250,	0,33101,43861,
#Partially deleted in new
chr18	5445139	5489047	chr18:5445139-5489047	0	-	5488937	5489047	789624	3	105,198,186,	0,33101,43722,
#Partially deleted in new
chr18	5445139	5488939	chr18:5445139-5488939	0	-	5445139	5445139	8553170	4	105,198,54,127,	0,33101,34930,43673,
#Partially deleted in new
chr18	5445139	5528999	chr18:5445139-5528999	0	-	5445139	5489183	789624	4	105,198,194,49,	0,33101,43861,83811,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	5463626	5480975	chr18:5463626-5480975	3	+	5463626	5463626	8553170	4	208,169,121,80,	0,3785,15999,17269,
#Partially deleted in new
chr18	5478240	5489370	chr18:5478240-5489370	0	-	5478240	5489183	789624	3	198,194,100,	0,10760,11030,
#Partially deleted in new
chr18	5478240	5543420	chr18:5478240-5543420	0	-	5478240	5489183	789624	3	198,194,108,	0,10760,65072,
#Partially deleted in new
chr18	5478246	5521423	chr18:5478246-5521423	0	-	5478246	5489183	789624	3	192,194,166,	0,10754,43011,
#Partially deleted in new
chr18	5478271	5540472	chr18:5478271-5540472	0	-	5478271	5489183	789624	4	167,194,78,133,	0,10729,61349,62068,
#Partially deleted in new
chr18	5478282	5540556	chr18:5478282-5540556	0	-	5478282	5489183	789624	3	156,194,217,	0,10718,62057,
#Partially deleted in new
chr18	5478349	5540415	chr18:5478349-5540415	0	-	5478349	5489183	789624	5	89,194,114,78,76,	0,10651,29815,61271,61990,
#Partially deleted in new
chr18	5478353	5630700	chr18:5478353-5630700	0	-	5478353	5478353	8553170	3	85,161,324,	0,10647,152023,
#Partially deleted in new
chr18	5478382	5540424	chr18:5478382-5540424	0	-	5478382	5489183	789624	5	56,194,83,78,85,	0,10618,40142,61238,61957,
#Partially deleted in new
chr18	5478398	5577648	chr18:5478398-5577648	0	-	5478398	5577384	789624	3	40,194,319,	0,10602,98931,
#Partially deleted in new
chr18	5567129	5570942	chr18:5567129-5570942	3	+	5567129	5567129	8553170	3	265,41,150,	0,3047,3663,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	5748818	5876328	chr18:5748818-5876328	0	+	5748818	5748818	8553170	4	146,176,156,76,	0,13479,44768,127434,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	5748818	5795901	chr18:5748818-5795901	3	+	5748818	5748818	789624	5	146,176,104,156,1108,	0,13479,20944,44768,45975,
#Partially deleted in new
chr18	5762441	5793796	chr18:5762441-5793796	0	+	5762441	5762441	8553170	3	32,104,210,	0,7321,31145,
#Deleted in new
chr18	5840694	5840833	chr18:5840694-5840833	3	+	5840694	5840694	5263520	1	139,	0,
#Deleted in new
chr18	5882071	5895955	chr18:5882071-5895955	3	-	5890197	5892063	789624	3	10086,451,101,	0,12958,13783,
#Deleted in new
chr18	5887486	5889463	chr18:5887486-5889463	1	+	5887486	5887486	8553170	2	236,384,	0,1593,
#Deleted in new
chr18	5887541	5889518	chr18:5887541-5889518	3	+	5887541	5887541	8553170	3	181,94,246,	0,1538,1731,
#Partially deleted in new
chr18	5887617	5909122	chr18:5887617-5909122	0	+	5887617	5887617	8553170	3	105,94,172,	0,1462,21333,
#Deleted in new
chr18	5890184	5892104	chr18:5890184-5892104	1	-	5890197	5892063	789624	1	1920,	0,
#Partially deleted in new
chr18	5954705	6414911	chr18:5954705-6414911	3	-	5956219	6311625	789624	19	1682,63,170,71,174,103,115,111,86,77,155,92,136,105,92,55,103,59,111,	0,5388,14687,126175,138649,183488,217122,258443,261044,283258,285012,286652,288588,289778,309241,347197,356848,357292,460095,
#Partially deleted in new
chr18	5956100	5960785	chr18:5956100-5960785	3	+	5956100	5956100	8553170	2	86,158,	0,4527,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	6017722	6017839	chr18:6017722-6017839	3	-	6017722	6017722	8553170	1	117,	0,
#Partially deleted in new
chr18	6025090	6082455	chr18:6025090-6082455	3	+	6025090	6025090	8553170	4	150,212,84,98,	0,54855,56101,57267,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr18	6029386	6414911	chr18:6029386-6414911	1	-	6032114	6311625	789624	17	2889,71,174,103,115,111,86,77,155,92,136,105,92,55,103,59,111,	0,51494,63968,108807,142441,183762,186363,208577,210331,211971,213907,215097,234560,272516,282167,282611,385414,
#Partially deleted in new
chr18	6239798	6326721	chr18:6239798-6326721	0	-	6239798	6311625	789624	9	74,92,136,105,92,55,103,59,286,	0,1559,3495,4685,24148,62104,71755,72199,86637,
#Partially deleted in new
chr18	6243385	6414798	chr18:6243385-6414798	0	-	6243385	6311625	789624	7	44,105,92,55,103,59,91,	0,1098,20561,58517,68168,68612,171322,
#Partially deleted in new
chr18	6244566	6415237	chr18:6244566-6415237	0	-	6244566	6311625	789624	6	22,92,55,103,59,237,	0,19380,57336,66987,67431,170434,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	6256746	6260934	chr18:6256746-6260934	3	+	6256746	6256746	789624	3	131,138,1775,	0,1912,2413,
#Partially deleted in new
chr18	6311599	6414184	chr18:6311599-6414184	0	-	6311599	6311599	8553170	4	57,59,116,225,	0,398,88135,102360,
#Deleted in new
chr18	6374360	6374425	chr18:6374360-6374425	3	-	6374360	6374360	5263520	1	65,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	6394846	6398020	chr18:6394846-6398020	3	-	6394846	6394846	8553170	1	3174,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	6454961	6455068	chr18:6454961-6455068	3	+	6454961	6454961	8553170	1	107,	0,
#Deleted in new
chr18	6462143	6463010	chr18:6462143-6463010	7	-	6462143	6462143	16724991	1	867,	0,
#Deleted in new
chr18	6462151	6463015	chr18:6462151-6463015	5	-	6462151	6462151	16724991	2	665,83,	0,781,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	6493419	6495668	chr18:6493419-6495668	3	+	6493419	6493419	8553170	2	434,133,	0,2116,
#Partially deleted in new
chr18	6511415	6590653	chr18:6511415-6590653	3	+	6511415	6511415	789624	6	195,88,115,57,29,119,	0,2223,64574,77395,78031,79119,
#Deleted in new
chr18	6557821	6558654	chr18:6557821-6558654	3	+	6557821	6557821	8553170	2	581,77,	0,756,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	6601539	6601836	chr18:6601539-6601836	3	+	6601539	6601539	8553170	1	297,	0,
#Deleted in new
chr18	6641970	6642478	chr18:6641970-6642478	3	-	6641970	6641970	8553170	1	508,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	6727052	6728981	chr18:6727052-6728981	3	+	6727052	6727052	8553170	1	1929,	0,
#Deleted in new
chr18	6728820	6729862	chr18:6728820-6729862	3	-	6728820	6728820	789624	2	348,143,	0,899,
#Partially deleted in new
chr18	6729717	6912155	chr18:6729717-6912155	1	+	6729821	6912154	789624	18	226,203,218,93,90,85,143,166,92,78,163,83,198,114,57,125,65,96,	0,95044,107479,121316,130090,138432,140872,143691,143966,146413,152419,157439,160170,160712,165117,166784,179242,182342,
#Partially deleted in new
chr18	6729945	6824964	chr18:6729945-6824964	0	+	6754798	6824964	789624	3	131,128,203,	0,24742,94816,
#Partially deleted in new
chr18	6730042	6851107	chr18:6730042-6851107	0	+	6730072	6851107	789624	4	71,137,161,74,	0,94719,107211,120991,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	6774001	6837378	chr18:6774001-6837378	0	+	6824795	6837378	789624	4	233,91,203,182,	0,4944,50760,63195,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr18	6788493	6898719	chr18:6788493-6898719	1	+	6824795	6898574	789624	17	3177,203,218,93,90,85,143,166,92,78,163,83,198,114,57,125,284,	0,36268,48703,62540,71314,79656,82096,84915,85190,87637,93643,98663,101394,101936,106341,108008,109942,
#Partially deleted in new
chr18	6834474	6915716	chr18:6834474-6915716	3	+	6837348	6912154	789624	17	65,218,93,90,85,143,166,92,78,163,83,198,114,57,125,65,3657,	0,2722,16559,25333,33675,36115,38934,39209,41656,47662,52682,55413,55955,60360,62027,74485,77585,
#Partially deleted in new
chr18	6834479	6912415	chr18:6834479-6912415	1	+	6837348	6912154	789624	17	60,218,82,86,85,143,166,92,78,163,83,198,114,57,125,65,356,	0,2717,16554,25332,33670,36110,38929,39204,41651,47657,52677,55408,55950,60355,62022,74480,77580,
#Partially deleted in new
chr18	6837192	6915700	chr18:6837192-6915700	1	+	6837348	6912154	789624	16	222,93,90,85,143,166,92,78,163,83,198,114,57,125,65,3641,	0,13841,22615,30957,33397,36216,36491,38938,44944,49964,52695,53237,57642,59309,71767,74867,
#Partially deleted in new
chr18	6837196	6870661	chr18:6837196-6870661	0	+	6837348	6859845	789624	5	218,93,67,85,72,	0,13837,22634,30953,33393,
#Partially deleted in new
chr18	6837196	6870646	chr18:6837196-6870646	0	+	6837348	6859845	789624	5	218,93,67,82,57,	0,13837,22634,30953,33393,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr18	6850790	6898721	chr18:6850790-6898721	1	+	6850864	6898574	789624	15	86,93,90,85,143,166,92,78,163,83,198,114,57,125,286,	0,243,9017,17359,19799,22618,22893,25340,31346,36366,39097,39639,44044,45711,47645,
#Deleted in new
chr18	6873398	6875024	chr18:6873398-6875024	3	-	6873398	6873398	8553170	2	139,405,	0,1221,
#Partially deleted in new
chr18	6873465	6890048	chr18:6873465-6890048	0	+	6873465	6890048	789624	5	109,92,163,83,161,	0,218,8671,13691,16422,
#Partially deleted in new
chr18	6873480	6882361	chr18:6873480-6882361	0	+	6873480	6873480	8553170	4	94,92,78,225,	0,203,2650,8656,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	6896759	6898719	chr18:6896759-6898719	0	+	6896759	6896759	8553170	1	1960,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	6925476	6926990	chr18:6925476-6926990	0	-	6925476	6925476	8553170	3	242,119,334,	0,963,1180,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	6925476	6929869	chr18:6925476-6929869	1	-	6925476	6925476	789624	7	242,154,119,928,100,118,87,	0,595,963,1180,2643,3374,4306,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	6925477	6928572	chr18:6925477-6928572	1	-	6925477	6925477	8553170	3	2107,100,136,	0,2642,2959,
#Deleted in new
chr18	6926943	6928210	chr18:6926943-6928210	7	+	6926943	6926943	16724991	2	505,595,	0,672,
#Partially deleted in new
chr18	6927305	6929962	chr18:6927305-6929962	0	-	6927305	6927305	8553170	4	279,100,118,48,	0,814,1545,2609,
#Partially deleted in new
chr18	6927307	6929805	chr18:6927307-6929805	0	-	6927307	6927307	8553170	5	277,100,118,64,23,	0,812,1543,2189,2475,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	6928348	6929966	chr18:6928348-6929966	1	-	6928348	6928348	8553170	4	371,118,64,52,	0,502,1148,1566,
#Deleted in new
chr18	6929250	6929836	chr18:6929250-6929836	0	-	6929250	6929250	8553170	1	586,	0,
#Deleted in new
chr18	6936911	6937020	chr18:6936911-6937020	3	-	6936911	6936911	8553170	1	109,	0,
#Partially deleted in new
chr18	6941743	7117814	chr18:6941743-7117814	3	-	6942078	7117720	789624	63	496,223,134,154,159,190,113,130,186,152,174,115,142,145,151,125,151,134,144,155,183,117,94,136,164,117,211,160,112,90,143,194,87,122,138,121,128,186,180,144,237,137,181,107,212,87,128,111,112,212,102,174,141,161,106,179,118,90,180,243,113,171,155,	0,1436,5419,6659,7357,9038,13609,14892,16733,17597,19842,20201,22918,23544,24403,30113,31313,33159,34193,35983,36452,38777,40753,41355,43493,43783,44393,50817,51897,53613,55998,57701,58167,60520,65395,66744,67495,68456,69556,70251,72071,73978,74747,75534,81420,82636,84235,90322,91240,92735,94243,95834,97066,98332,100401,101483,102978,104534,107334,108950,138231,138543,175916,
#Partially deleted in new
chr18	6941888	6965956	chr18:6941888-6965956	0	-	6941888	6941888	8553170	14	351,223,134,154,159,190,113,130,186,152,107,115,142,669,	0,1291,5274,6514,7212,8893,13464,14747,16588,17452,19697,20056,22773,23399,
#Partially deleted in new
chr18	6941888	6956447	chr18:6941888-6956447	0	-	6941888	6941888	8553170	7	351,223,134,154,159,190,1095,	0,1291,5274,6514,7212,8893,13464,
#Boundary problem: need 62, got 0, diff 62, mapped 0.0
chr18	6941947	7117759	chr18:6941947-7117759	0	-	6941947	6941947	8553170	62	292,223,134,154,159,190,113,130,186,152,174,115,142,145,151,125,151,134,144,155,183,117,94,136,164,117,211,160,112,90,143,194,87,122,138,121,128,186,180,144,237,137,181,107,212,87,128,111,112,212,102,174,141,161,1261,118,90,180,243,113,171,100,	0,1232,5215,6455,7153,8834,13405,14688,16529,17393,19638,19997,22714,23340,24199,29909,31109,32955,33989,35779,36248,38573,40549,41151,43289,43579,44189,50613,51693,53409,55794,57497,57963,60316,65191,66540,67291,68252,69352,70047,71867,73774,74543,75330,81216,82432,84031,90118,91036,92531,94039,95630,96862,98128,100197,102774,104330,107130,108746,138027,138339,175712,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	6953729	6960695	chr18:6953729-6960695	0	-	6953729	6953729	8553170	3	3036,186,1355,	0,4747,5611,
#Deleted in new
chr18	6954676	6957419	chr18:6954676-6957419	3	+	6954676	6954676	789624	2	241,2054,	0,689,
#Partially deleted in new
chr18	6956434	6966214	chr18:6956434-6966214	1	-	6956434	6959477	789624	10	231,69,28,186,152,174,115,142,145,68,	0,233,303,2042,2906,5151,5510,8227,8853,9712,
#Partially deleted in new
chr18	6963884	6965547	chr18:6963884-6965547	0	-	6963884	6963884	8553170	3	253,142,260,	0,777,1403,
#Partially deleted in new
chr18	6965399	6972208	chr18:6965399-6972208	0	-	6965399	6965399	8553170	3	33,151,352,	0,747,6457,
#Partially deleted in new
chr18	7038571	7040237	chr18:7038571-7040237	0	-	7038571	7038571	8553170	2	379,162,	0,1504,
#Partially deleted in new
chr18	7076816	7080123	chr18:7076816-7080123	3	+	7076816	7076816	8553170	3	92,66,449,	0,2503,2858,
#Partially deleted in new
chr18	7134930	7135819	chr18:7134930-7135819	7	+	7134930	7134930	16724991	1	889,	0,
#Deleted in new
chr18	7231124	7232047	chr18:7231124-7232047	3	+	7231138	7232044	789624	1	923,	0,
#Deleted in new
chr18	7301019	7301153	chr18:7301019-7301153	3	-	7301019	7301019	8553170	1	134,	0,
#Partially deleted in new
chr18	7566781	8406861	chr18:7566781-8406861	3	+	7567818	8406162	0	31	1110,123,272,79,116,175,294,309,110,202,103,274,37,133,152,75,188,88,77,37,98,117,155,136,150,174,132,126,164,136,753,	0,207367,321324,339723,359786,382399,388339,502904,509673,518889,521967,546704,548009,576865,677276,681063,686445,729586,747999,752396,776641,804108,809264,809680,811483,812385,813514,817779,820290,827694,839327,
#Partially deleted in new
chr18	7566781	8406668	chr18:7566781-8406668	1	+	7567818	8406162	0	33	1110,123,272,79,116,175,294,309,110,202,103,274,37,133,152,75,27,12,188,88,77,37,98,117,155,136,150,174,132,126,164,136,560,	0,207367,321324,339723,359786,382399,388339,502904,509673,518889,521967,546704,548009,576865,677276,681063,681368,685706,686445,729586,747999,752396,776641,804108,809264,809680,811483,812385,813514,817779,820290,827694,839327,
#Partially deleted in new
chr18	7741309	7749443	chr18:7741309-7749443	3	-	7741309	7741309	8553170	2	672,385,	0,7749,
#Partially deleted in new
chr18	7754972	8406856	chr18:7754972-8406856	1	+	7774261	8406162	789624	31	312,123,272,79,116,175,294,309,110,202,103,274,37,133,152,75,188,88,77,37,98,117,155,136,150,174,132,126,164,136,748,	0,19176,133133,151532,171595,194208,200148,314713,321482,330698,333776,358513,359818,388674,489085,492872,498254,541395,559808,564205,588450,615917,621073,621489,623292,624194,625323,629588,632099,639503,651136,
#Partially deleted in new
chr18	7774139	8406858	chr18:7774139-8406858	1	+	8378360	8406162	789624	32	132,272,79,116,175,294,309,110,202,103,274,37,133,152,75,27,12,188,88,77,37,98,117,155,136,150,174,132,126,164,136,750,	0,113966,132365,152428,175041,180981,295546,302315,311531,314609,339346,340651,369507,469918,473705,474010,478348,479087,522228,540641,545038,569283,596750,601906,602322,604125,605027,606156,610421,612932,620336,631969,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	7814117	7815730	chr18:7814117-7815730	3	+	7814117	7814117	8553170	1	1613,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	7946869	8069712	chr18:7946869-8069712	0	+	7946953	8069712	789624	4	108,175,294,27,	0,2311,8251,122816,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	7995569	7995785	chr18:7995569-7995785	3	+	7995569	7995569	8553170	1	216,	0,
#Partially deleted in new
chr18	8017791	8069959	chr18:8017791-8069959	0	+	8017791	8017791	8553170	2	304,274,	0,51894,
#Partially deleted in new
chr18	8017822	8113632	chr18:8017822-8113632	0	+	8017822	8017822	8553170	6	235,309,110,202,103,147,	0,51863,58632,67848,70926,95663,
#Partially deleted in new
chr18	8049363	8076564	chr18:8049363-8076564	0	+	8049363	8049363	8553170	3	67,309,110,	0,20322,27091,
#Partially deleted in new
chr18	8085701	8143778	chr18:8085701-8143778	0	+	8085701	8143778	789624	6	171,103,274,37,75,132,	0,3047,27784,29089,36540,57945,
#Partially deleted in new
chr18	8113570	8296455	chr18:8113570-8296455	0	+	8113570	8296378	789624	7	189,37,133,152,75,27,88,	0,1220,30076,130487,134274,134579,182797,
#Partially deleted in new
chr18	8121851	8406666	chr18:8121851-8406666	0	+	8121851	8121851	8553170	17	465,133,152,75,88,77,37,98,117,155,1953,174,132,126,164,136,558,	0,21795,122206,125993,174516,192929,197326,221571,249038,254194,254610,257315,258444,262709,265220,272624,284257,
#Deleted in new
chr18	8154557	8155070	chr18:8154557-8155070	3	+	8154557	8154557	8553170	1	513,	0,
#Partially deleted in new
chr18	8244056	8251821	chr18:8244056-8251821	0	+	8244056	8244056	8553170	4	153,75,27,209,	0,3788,4093,7556,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	8247873	8270447	chr18:8247873-8270447	0	+	8247873	8247873	8553170	3	46,188,442,	0,5353,22132,
#Partially deleted in new
chr18	8360819	8367034	chr18:8360819-8367034	3	-	8360819	8360819	5263520	4	272,81,85,178,	0,4089,4925,6037,
#Partially deleted in new
chr18	8370932	8379313	chr18:8370932-8379313	0	+	8370932	8379313	789624	6	74,51,155,136,150,147,	0,827,5113,5529,7332,8234,
#Partially deleted in new
chr18	8399700	8406664	chr18:8399700-8406664	0	+	8399700	8399700	8553170	2	131,556,	0,6408,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	8402846	8405161	chr18:8402846-8405161	3	+	8402846	8402846	8553170	1	2315,	0,
#Deleted in new
chr18	8406760	8406953	chr18:8406760-8406953	3	-	8406760	8406760	8553170	1	193,	0,
#Deleted in new
chr18	8412128	8414304	chr18:8412128-8414304	7	+	8412128	8412128	16724991	1	2176,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	8471830	8472128	chr18:8471830-8472128	3	+	8471830	8471830	8553170	1	298,	0,
#Partially deleted in new
chr18	8486996	8513849	chr18:8486996-8513849	7	+	8486996	8486996	16724991	3	43,505,1038,	0,19518,25815,
#Partially deleted in new
chr18	8545634	8546817	chr18:8545634-8546817	7	+	8545634	8545634	16724991	2	466,373,	0,810,
#Partially deleted in new
chr18	8609436	8639381	chr18:8609436-8639381	1	+	8609439	8638262	8553170	6	517,61,139,90,105,1233,	0,15501,23752,26096,26816,28712,
#Partially deleted in new
chr18	8609444	8639382	chr18:8609444-8639382	3	+	8609727	8638262	0	6	509,61,139,90,105,1234,	0,15493,23744,26088,26808,28704,
#Partially deleted in new
chr18	8632858	8635567	chr18:8632858-8635567	0	+	8632858	8632858	8553170	2	469,35,	0,2674,
#Deleted in new
chr18	8635178	8636347	chr18:8635178-8636347	3	-	8635178	8635178	8553170	2	621,159,	0,1010,
#Deleted in new
chr18	8688021	8688410	chr18:8688021-8688410	7	-	8688021	8688021	16724991	1	389,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	8695855	8707621	chr18:8695855-8707621	3	-	8695855	8695855	789624	2	266,552,	0,11214,
#Partially deleted in new
chr18	8705660	8828946	chr18:8705660-8828946	1	+	8705660	8828946	789624	14	1053,225,159,60,1314,156,231,195,168,255,297,32,1534,39,	0,12763,14677,72172,77869,80275,90571,92436,101232,107318,113302,115806,119038,123247,
#Partially deleted in new
chr18	8707410	8832777	chr18:8707410-8832777	1	+	8718450	8828946	789624	15	155,225,159,60,1314,156,231,195,168,255,297,32,1534,57,1171,	0,11013,12927,70422,76119,78525,88821,90686,99482,105568,111552,114056,117288,121497,124196,
#Partially deleted in new
chr18	8717370	8832778	chr18:8717370-8832778	3	+	8718450	8828946	789624	17	56,59,225,159,60,1314,156,123,231,195,168,255,297,32,1534,57,1172,	0,533,1053,2967,60462,66159,68565,75627,78861,80726,89522,95608,101592,104096,107328,111537,114236,
#Partially deleted in new
chr18	8717375	8777977	chr18:8717375-8777977	0	+	8717375	8717375	8553170	4	51,225,159,145,	0,1048,2962,60457,
#Deleted in new
chr18	8717758	8718592	chr18:8717758-8718592	0	+	8718450	8718592	789624	2	204,169,	0,665,
#Partially deleted in new
chr18	8717897	8832777	chr18:8717897-8832777	1	+	8718450	8828946	789624	16	65,225,159,60,1314,156,123,231,195,168,255,297,32,1534,57,1171,	0,526,2440,59935,65632,68038,75100,78334,80199,88995,95081,101065,103569,106801,111010,113709,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	8720033	8720132	chr18:8720033-8720132	3	-	8720033	8720033	8553170	1	99,	0,
#Partially deleted in new
chr18	8782087	8810002	chr18:8782087-8810002	0	+	8783586	8796311	789624	8	630,1314,37,156,231,195,168,555,	0,1442,3602,3848,14144,16009,24805,27360,
#Deleted in new
chr18	8784540	8785860	chr18:8784540-8785860	0	+	8784540	8784540	8553170	2	303,171,	0,1149,
#Deleted in new
chr18	8784657	8787303	chr18:8784657-8787303	0	+	8784657	8784657	8553170	2	186,1368,	0,1278,
#Deleted in new
chr18	8784673	8787344	chr18:8784673-8787344	0	+	8784673	8784673	8553170	3	170,156,251,	0,1262,2420,
#Partially deleted in new
chr18	8789673	8832778	chr18:8789673-8832778	1	+	8796276	8831840	789624	10	49,231,195,168,114,255,213,32,1534,1172,	0,6558,8423,17219,19774,23305,29373,31793,35025,41933,
#Partially deleted in new
chr18	8800441	8813044	chr18:8800441-8813044	0	+	8800441	8800441	8553170	3	336,168,66,	0,6451,12537,
#Deleted in new
chr18	8801655	8802305	chr18:8801655-8802305	3	+	8801655	8801655	8553170	1	650,	0,
#Partially deleted in new
chr18	8809817	8813157	chr18:8809817-8813157	0	+	8809817	8809817	8553170	2	381,179,	0,3161,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	8811130	8819245	chr18:8811130-8819245	0	+	8811130	8811130	8553170	3	126,255,199,	0,1848,7916,
#Partially deleted in new
chr18	8812844	8819171	chr18:8812844-8819171	0	+	8812844	8812844	8553170	2	389,209,	0,6118,
#Deleted in new
chr18	8829922	8832778	chr18:8829922-8832778	0	+	8829922	8829922	8553170	1	2856,	0,
#Partially deleted in new
chr18	9020028	9020764	chr18:9020028-9020764	7	+	9020028	9020028	16724991	1	736,	0,
#Partially deleted in new
chr18	9102629	9134345	chr18:9102629-9134345	3	+	9102743	9134279	0	8	168,66,63,117,169,110,77,160,	0,15208,16696,16844,19883,22244,24201,31556,
#Partially deleted in new
chr18	9102629	9117887	chr18:9102629-9117887	0	+	9102743	9102863	789624	2	804,50,	0,15208,
#Deleted in new
chr18	9102694	9103856	chr18:9102694-9103856	1	+	9102743	9103103	789624	2	103,765,	0,397,
#Partially deleted in new
chr18	9102735	9254346	chr18:9102735-9254346	0	+	9102735	9102735	8553170	2	62,136,	0,151475,
#Partially deleted in new
chr18	9102735	9182524	chr18:9102735-9182524	3	+	9102735	9102735	8553170	9	62,66,63,117,169,110,77,107,143,	0,15102,16590,16738,19777,22138,24095,31450,79646,
#Partially deleted in new
chr18	9102817	9117903	chr18:9102817-9117903	0	+	9102817	9102817	8553170	2	145,66,	0,15020,
#Partially deleted in new
chr18	9104081	9134345	chr18:9104081-9134345	1	+	9104198	9134279	789624	9	144,36,66,63,117,169,110,77,160,	0,862,13756,15244,15392,18431,20792,22749,30104,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	9112403	9115877	chr18:9112403-9115877	3	-	9112403	9112403	8553170	2	335,209,	0,3265,
#Deleted in new
chr18	9117386	9119525	chr18:9117386-9119525	0	+	9117386	9117386	8553170	3	517,63,52,	0,1939,2087,
#Deleted in new
chr18	9117525	9119566	chr18:9117525-9119566	0	+	9117525	9117525	8553170	4	113,66,63,93,	0,312,1800,1948,
#Partially deleted in new
chr18	9119472	9134341	chr18:9119472-9134341	0	+	9119472	9119472	8553170	5	118,169,123,77,156,	0,3040,5401,7358,14713,
#Partially deleted in new
chr18	9121264	9136645	chr18:9121264-9136645	3	-	9121264	9121264	789624	4	192,176,120,282,	0,10958,12126,15099,
#Partially deleted in new
chr18	9121276	9133422	chr18:9121276-9133422	1	-	9121276	9121276	8553170	3	180,187,32,	0,10946,12114,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	9126626	9134295	chr18:9126626-9134295	0	+	9126626	9126626	8553170	3	77,77,110,	0,204,7559,
#Deleted in new
chr18	9135712	9136491	chr18:9135712-9136491	1	-	9135712	9135712	8553170	1	779,	0,
#Partially deleted in new
chr18	9136227	9195597	chr18:9136227-9195597	0	+	9182432	9195597	789624	3	128,138,47,	0,46154,59323,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr18	9136776	9285985	chr18:9136776-9285985	3	+	9182432	9281126	789624	13	189,138,148,69,147,201,143,148,4721,99,144,96,5045,	0,45605,58774,67699,71880,74807,79981,85075,117434,127013,138747,142772,144164,
#Partially deleted in new
chr18	9136795	9182470	chr18:9136795-9182470	0	+	9182432	9182470	789624	2	301,89,	0,45586,
#Partially deleted in new
chr18	9136804	9235820	chr18:9136804-9235820	0	+	9136804	9136804	8553170	9	161,138,148,69,147,201,143,148,183,	0,45577,58746,67671,71852,74779,79953,85047,98833,
#Partially deleted in new
chr18	9136838	9208743	chr18:9136838-9208743	0	+	9182432	9200527	789624	5	127,138,148,131,87,	0,45543,58712,63675,71818,
#Partially deleted in new
chr18	9137562	9283759	chr18:9137562-9283759	1	+	9182432	9281126	789624	12	311,138,148,147,201,143,148,4721,99,144,96,2819,	0,44819,57988,71094,74021,79195,84289,116648,126227,137961,141986,143378,
#Partially deleted in new
chr18	9182381	9211621	chr18:9182381-9211621	0	+	9182381	9182381	8553170	3	138,147,38,	0,26275,29202,
#Partially deleted in new
chr18	9182385	9254273	chr18:9182385-9254273	0	+	9182432	9254273	789624	7	134,148,141,201,143,148,63,	0,13165,26271,29198,34372,39466,71825,
#Partially deleted in new
chr18	9216779	9256111	chr18:9216779-9256111	0	+	9216779	9239499	789624	4	121,148,80,1901,	0,5072,22697,37431,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	9249648	9249746	chr18:9249648-9249746	3	-	9249648	9249648	8553170	1	98,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	9250109	9250211	chr18:9250109-9250211	3	+	9250109	9250109	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	9259387	9260390	chr18:9259387-9260390	3	+	9259387	9259387	8553170	1	1003,	0,
#Partially deleted in new
chr18	9334766	9402420	chr18:9334766-9402420	3	+	9337229	9399527	789624	5	154,160,100,267,3075,	0,2426,25205,61513,64579,
#Partially deleted in new
chr18	9334766	9400817	chr18:9334766-9400817	0	+	9337229	9388044	789624	7	154,160,100,101,57,267,1472,	0,2426,25205,53273,53597,61513,64579,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	9334849	9397067	chr18:9334849-9397067	1	+	9337229	9396611	789624	4	71,160,100,788,	0,2343,25122,61430,
#Deleted in new
chr18	9473420	9474006	chr18:9473420-9474006	3	-	9473420	9473420	8553170	1	586,	0,
#Partially deleted in new
chr18	9475008	9538114	chr18:9475008-9538114	3	+	9513045	9535937	0	10	168,299,459,350,162,132,108,122,124,2444,	0,37982,41836,47151,49585,50711,55825,58326,58694,60662,
#Partially deleted in new
chr18	9475669	9538116	chr18:9475669-9538116	1	+	9513045	9535937	0	10	22,299,459,350,162,132,108,122,124,2446,	0,37321,41175,46490,48924,50050,55164,57665,58033,60001,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	9475669	9520199	chr18:9475669-9520199	1	+	9513045	9517329	789624	3	22,299,3355,	0,37321,41175,
#Partially deleted in new
chr18	9476126	9517221	chr18:9476126-9517221	0	+	9513045	9517221	789624	3	160,299,377,	0,36864,40718,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	9476134	9513056	chr18:9476134-9513056	0	+	9513045	9513056	8553170	3	152,285,66,	0,834,36856,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	9506241	9509726	chr18:9506241-9509726	3	+	9506241	9506241	8553170	1	3485,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	9518118	9518260	chr18:9518118-9518260	3	-	9518118	9518118	8553170	1	142,	0,
#Partially deleted in new
chr18	9546790	9614569	chr18:9546790-9614569	1	-	9547788	9614484	789624	20	1162,142,135,121,101,162,186,96,173,527,128,159,66,108,147,143,107,85,45,92,	0,2406,3261,3487,6531,10430,12628,15189,16587,23366,30273,36326,37724,37930,41298,41920,46977,48227,67435,67687,
#Partially deleted in new
chr18	9546790	9614558	chr18:9546790-9614558	3	-	9547788	9614484	789624	20	1162,142,135,121,101,162,186,96,173,527,128,159,66,108,147,143,107,136,45,81,	0,2406,3261,3487,6531,10430,12628,15189,16587,23366,30273,36326,37724,37930,41298,41920,46977,48227,67435,67687,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	9546909	9551939	chr18:9546909-9551939	0	-	9546909	9546909	8553170	4	1043,142,135,1662,	0,2287,3142,3368,
#Partially deleted in new
chr18	9547712	9614505	chr18:9547712-9614505	0	-	9588735	9614484	789624	20	240,142,135,121,101,162,186,96,125,173,527,128,159,66,108,147,143,85,45,28,	0,1484,2339,2565,5609,9508,11706,14267,15209,15665,22444,29351,35404,36802,37008,40376,40998,47305,66513,66765,
#Partially deleted in new
chr18	9547803	9553422	chr18:9547803-9553422	0	-	9547803	9547803	8553170	5	149,142,135,38,101,	0,1393,2248,2474,5518,
#Deleted in new
chr18	9549237	9550300	chr18:9549237-9550300	0	-	9549237	9549237	8553170	2	101,249,	0,814,
#Deleted in new
chr18	9549833	9550482	chr18:9549833-9550482	0	-	9549833	9549833	8553170	2	353,205,	0,444,
#Partially deleted in new
chr18	9550368	9562072	chr18:9550368-9562072	0	-	9550368	9550368	8553170	5	30,101,162,123,93,	0,2953,6852,9050,11611,
#Deleted in new
chr18	9556980	9559576	chr18:9556980-9559576	0	-	9556980	9556980	8553170	2	402,158,	0,2438,
#Partially deleted in new
chr18	9557325	9563146	chr18:9557325-9563146	0	-	9557325	9557325	8553170	4	57,186,96,225,	0,2093,4654,5596,
#Deleted in new
chr18	9561982	9563866	chr18:9561982-9563866	0	-	9561982	9561982	8553170	2	93,489,	0,1395,
#Partially deleted in new
chr18	9562922	9570466	chr18:9562922-9570466	0	-	9562922	9562922	8553170	3	88,173,310,	0,455,7234,
#Partially deleted in new
chr18	9577063	9595061	chr18:9577063-9595061	0	-	9577063	9577063	8553170	7	128,66,108,147,143,107,44,	0,7451,7657,11025,11647,16704,17954,
#Partially deleted in new
chr18	9584775	9614533	chr18:9584775-9614533	0	-	9588735	9614484	789624	6	53,147,143,136,45,56,	0,3313,3935,10242,29450,29702,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	9587385	9590182	chr18:9587385-9590182	3	+	9587385	9587385	8553170	2	147,387,	0,2410,
#Partially deleted in new
chr18	9588078	9614515	chr18:9588078-9614515	0	-	9588078	9588078	8553170	5	157,143,85,45,38,	0,632,6939,26147,26399,
#Partially deleted in new
chr18	9588084	9599712	chr18:9588084-9599712	0	-	9588084	9588084	8553170	5	151,143,107,85,80,	0,626,5683,6933,11548,
#Partially deleted in new
chr18	9588084	9613589	chr18:9588084-9613589	0	-	9588084	9588084	8553170	5	151,143,107,85,63,	0,626,5683,6933,25442,
#Partially deleted in new
chr18	9588090	9614895	chr18:9588090-9614895	0	-	9588090	9595076	789624	6	145,143,107,85,45,100,	0,620,5677,6927,26135,26705,
#Partially deleted in new
chr18	9588108	9613576	chr18:9588108-9613576	0	-	9588108	9588108	8553170	5	127,143,107,136,50,	0,602,5659,6909,25418,
#Partially deleted in new
chr18	9588113	9614295	chr18:9588113-9614295	0	-	9588113	9595076	789624	5	122,143,107,136,70,	0,597,5654,6904,26112,
#Partially deleted in new
chr18	9588137	9615240	chr18:9588137-9615240	0	-	9588137	9595076	789624	6	98,143,107,85,45,57,	0,573,5630,6880,26088,27046,
#Partially deleted in new
chr18	9588151	9599741	chr18:9588151-9599741	0	-	9588151	9588151	8553170	5	84,143,107,136,109,	0,559,5616,6866,11481,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	9588171	9614559	chr18:9588171-9614559	0	-	9593839	9614484	789624	7	64,143,107,56,85,45,82,	0,539,5596,6007,6846,26054,26306,
#Partially deleted in new
chr18	9588208	9615189	chr18:9588208-9615189	0	-	9588208	9615181	789624	6	27,143,107,85,45,171,	0,502,5559,6809,26017,26810,
#Partially deleted in new
chr18	9588728	9614287	chr18:9588728-9614287	0	-	9588728	9595076	789624	4	125,107,85,62,	0,5039,6289,25497,
#Partially deleted in new
chr18	9588826	9614533	chr18:9588826-9614533	0	-	9612688	9614484	789624	6	27,107,85,234,45,56,	0,4941,6191,23630,25399,25651,
#Partially deleted in new
chr18	9594702	9614513	chr18:9594702-9614513	0	-	9594702	9594702	8553170	3	400,45,36,	0,19523,19775,
#Partially deleted in new
chr18	9594824	9614274	chr18:9594824-9614274	0	-	9594824	9594824	8553170	2	329,49,	0,19401,
#Deleted in new
chr18	9613795	9614533	chr18:9613795-9614533	0	-	9613795	9613795	8553170	2	475,56,	0,682,
#Partially deleted in new
chr18	9615263	9619363	chr18:9615263-9619363	3	+	9615263	9615263	789624	3	72,138,169,	0,1884,3931,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	9617963	9618072	chr18:9617963-9618072	3	-	9617963	9617963	8553170	1	109,	0,
#Partially deleted in new
chr18	9646109	9648502	chr18:9646109-9648502	3	+	9646109	9646109	8553170	2	453,517,	0,1876,
#Deleted in new
chr18	9678247	9679493	chr18:9678247-9679493	7	-	9678247	9678247	16724991	1	1246,	0,
#Partially deleted in new
chr18	9708164	9862551	chr18:9708164-9862551	3	+	9708405	9859325	789624	7	280,80,82,72,107,110,3324,	0,67113,83989,105855,106951,137417,151063,
#Partially deleted in new
chr18	9708274	9859469	chr18:9708274-9859469	0	+	9708405	9792192	789624	6	170,82,72,107,110,242,	0,83879,105745,106841,137307,150953,
#Partially deleted in new
chr18	9708306	9859286	chr18:9708306-9859286	0	+	9708405	9845605	789624	5	138,80,82,110,59,	0,66971,83847,137275,150921,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	9708322	9758151	chr18:9708322-9758151	0	+	9708405	9723576	789624	5	122,122,156,125,189,	0,14419,15235,17704,49640,
#Partially deleted in new
chr18	9734881	9735602	chr18:9734881-9735602	7	-	9734881	9734881	16724991	2	88,280,	0,441,
#Partially deleted in new
chr18	9775286	9859592	chr18:9775286-9859592	0	+	9775286	9775286	8553170	3	71,82,365,	0,16867,83941,
#Partially deleted in new
chr18	9785107	9787805	chr18:9785107-9787805	7	+	9785107	9785107	16724991	2	130,1036,	0,1662,
#Partially deleted in new
chr18	9792152	9816158	chr18:9792152-9816158	0	+	9792152	9792152	8553170	4	83,72,107,66,	0,21867,22963,23940,
#Partially deleted in new
chr18	9797358	9859372	chr18:9797358-9859372	0	+	9797358	9797358	8553170	5	149,72,107,110,145,	0,16661,17757,48223,61869,
#Deleted in new
chr18	9814047	9815438	chr18:9814047-9815438	0	+	9814047	9814047	8553170	2	44,323,	0,1068,
#Partially deleted in new
chr18	9814653	9845692	chr18:9814653-9845692	0	+	9814653	9814653	8553170	3	77,107,111,	0,462,30928,
#Partially deleted in new
chr18	9814720	9845679	chr18:9814720-9845679	0	+	9814720	9814720	8553170	3	67,107,98,	0,395,30861,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	9830329	9830627	chr18:9830329-9830627	3	-	9830329	9830329	8553170	1	298,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	9844716	9844846	chr18:9844716-9844846	7	-	9844716	9844716	16724991	1	130,	0,
#Partially deleted in new
chr18	9849595	9859508	chr18:9849595-9859508	0	+	9849595	9849595	8553170	2	61,281,	0,9632,
#Partially deleted in new
chr18	9856043	9859520	chr18:9856043-9859520	0	+	9856043	9856043	8553170	2	311,293,	0,3184,
#Deleted in new
chr18	9880579	9880886	chr18:9880579-9880886	7	-	9880579	9880579	16724991	1	307,	0,
#Deleted in new
chr18	9885725	9888141	chr18:9885725-9888141	1	+	9886174	9888141	789624	4	558,838,1,669,	0,863,1732,1747,
#Deleted in new
chr18	9885765	9888380	chr18:9885765-9888380	1	+	9886680	9887417	789624	3	315,420,968,	0,823,1647,
#Deleted in new
chr18	9885777	9886930	chr18:9885777-9886930	0	+	9886680	9886930	789624	3	110,119,342,	0,184,811,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	9885937	9889275	chr18:9885937-9889275	3	+	9886680	9888141	789624	2	143,2687,	0,651,
#Deleted in new
chr18	9885975	9888153	chr18:9885975-9888153	1	+	9886174	9888141	789624	2	308,1565,	0,613,
#Deleted in new
chr18	9886013	9886930	chr18:9886013-9886930	0	+	9886013	9886013	8553170	2	270,489,	0,428,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	9912315	9912849	chr18:9912315-9912849	3	-	9912315	9912315	8553170	1	534,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	9914001	9960021	chr18:9914001-9960021	1	+	9914256	9954211	0	6	334,153,104,81,174,5969,	0,17808,22108,22984,36393,40051,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	9914051	9936589	chr18:9914051-9936589	0	+	9914051	9914051	8553170	3	284,153,480,	0,17758,22058,
#Partially deleted in new
chr18	9914061	9954358	chr18:9914061-9954358	3	+	9914256	9954211	0	7	274,153,104,81,135,174,306,	0,17748,22048,22924,30862,36333,39991,
#Partially deleted in new
chr18	9914062	9936157	chr18:9914062-9936157	0	+	9914256	9924913	789624	4	273,93,153,48,	0,10840,17747,22047,
#Partially deleted in new
chr18	9914612	9925074	chr18:9914612-9925074	0	+	9914612	9914612	8553170	2	453,79,	0,10383,
#Partially deleted in new
chr18	9915769	9954143	chr18:9915769-9954143	0	+	9915769	9915769	8553170	6	51,153,104,81,174,91,	0,16040,20340,21216,34625,38283,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	9923919	9924021	chr18:9923919-9924021	7	+	9923919	9923919	16724991	1	102,	0,
#Partially deleted in new
chr18	9931776	9954226	chr18:9931776-9954226	0	+	9931776	9931776	8553170	5	186,104,81,174,174,	0,4333,5209,18618,22276,
#Partially deleted in new
chr18	9936726	9954477	chr18:9936726-9954477	0	+	9936726	9936726	8553170	3	340,174,425,	0,13668,17326,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	9947593	9951353	chr18:9947593-9951353	0	+	9947593	9947593	8553170	1	3760,	0,
#Partially deleted in new
chr18	10125339	10144406	chr18:10125339-10144406	3	+	10125339	10125339	8553170	2	162,250,	0,18817,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	10323131	10372380	chr18:10323131-10372380	3	-	10323131	10323131	8553170	6	180,161,202,122,109,154,	0,402,3937,15695,48214,49095,
#Partially deleted in new
chr18	10375102	10378114	chr18:10375102-10378114	3	+	10375102	10375102	8553170	2	136,336,	0,2676,
#Partially deleted in new
chr18	10405132	10414370	chr18:10405132-10414370	3	-	10405132	10405132	789624	3	239,78,1590,	0,1005,7648,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	10411607	10414515	chr18:10411607-10414515	1	-	10411607	10411607	8553170	1	2908,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	10454627	10489948	chr18:10454627-10489948	3	+	10454981	10488038	789624	5	412,184,532,322,2359,	0,13841,16902,30834,32962,
#Partially deleted in new
chr18	10454835	10487896	chr18:10454835-10487896	0	+	10454981	10485589	789624	3	204,322,307,	0,30626,32754,
#Partially deleted in new
chr18	10454883	10485503	chr18:10454883-10485503	0	+	10454981	10471540	789624	3	156,532,42,	0,16646,30578,
#Partially deleted in new
chr18	10454981	10487663	chr18:10454981-10487663	1	+	10454981	10487659	789624	5	58,184,211,32,74,	0,13487,16548,30770,32608,
#Partially deleted in new
chr18	10471835	10477878	chr18:10471835-10477878	0	+	10471835	10476342	789624	2	226,1992,	0,4051,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	10472006	10487814	chr18:10472006-10487814	0	+	10472006	10485549	789624	4	55,142,322,225,	0,2099,13455,15583,
#Partially deleted in new
chr18	10525904	10550801	chr18:10525904-10550801	0	+	10526102	10539762	789624	8	254,110,67,71,79,80,130,725,	0,13857,14083,14424,20421,22394,23062,24172,
#Partially deleted in new
chr18	10526028	10550520	chr18:10526028-10550520	0	+	10526102	10532723	789624	11	130,85,18,31,110,67,71,79,80,130,444,	0,6682,7507,8437,13733,13959,14300,20297,22270,22938,24048,
#Duplicated in new
chr18	10526033	10552760	chr18:10526033-10552760	3	+	10526102	10550220	789624	12	125,68,85,18,31,110,67,71,79,80,130,2684,	0,4736,6677,7502,8432,13728,13954,14295,20292,22265,22933,24043,
#Partially deleted in new
chr18	10526101	10540779	chr18:10526101-10540779	0	+	10526101	10526101	8553170	8	57,68,85,18,31,110,67,451,	0,4668,6609,7434,8364,13660,13886,14227,
#Partially deleted in new
chr18	10526104	10533331	chr18:10526104-10533331	0	+	10526104	10526104	8553170	3	54,68,621,	0,4665,6606,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	10526411	10540015	chr18:10526411-10540015	0	+	10526574	10540015	789624	7	354,68,85,18,31,110,28,	0,4358,6299,7124,8054,13350,13576,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	10539123	10552761	chr18:10539123-10552761	0	+	10539123	10539123	8553170	7	748,67,71,79,80,130,2685,	0,864,1205,7202,9175,9843,10953,
#Partially deleted in new
chr18	10612303	10626353	chr18:10612303-10626353	3	-	10612303	10612303	8553170	3	550,185,125,	0,4529,13925,
#Partially deleted in new
chr18	10612401	10617013	chr18:10612401-10617013	0	-	10612401	10612401	8553170	2	452,179,	0,4433,
#Deleted in new
chr18	10622122	10622267	chr18:10622122-10622267	7	-	10622122	10622122	16724991	1	145,	0,
#Partially deleted in new
chr18	10623875	10624305	chr18:10623875-10624305	7	-	10623875	10623875	16724991	1	430,	0,
#Partially deleted in new
chr18	10627645	10628846	chr18:10627645-10628846	3	-	10627645	10627645	8553170	2	26,396,	0,805,
#Partially deleted in new
chr18	10632237	10632396	chr18:10632237-10632396	7	+	10632237	10632237	16724991	1	159,	0,
#Deleted in new
chr18	10636669	10637399	chr18:10636669-10637399	7	+	10636669	10636669	16724991	1	730,	0,
#Deleted in new
chr18	10661932	10666887	chr18:10661932-10666887	3	+	10661932	10661932	789624	3	248,254,3064,	0,1388,1891,
#Partially deleted in new
chr18	10666482	10672747	chr18:10666482-10672747	0	-	10666592	10672747	789624	2	331,58,	0,6207,
#Partially deleted in new
chr18	10670240	11148588	chr18:10670240-11148588	1	-	10671526	11148588	789624	51	1539,184,80,129,173,93,148,159,215,148,133,253,183,259,411,167,167,60,115,107,72,122,90,160,97,244,166,102,205,201,126,177,161,218,174,149,287,124,231,149,139,39,120,163,214,211,163,43,126,96,64,	0,2449,4968,7506,9958,11420,19414,20984,25833,26151,27507,28684,31748,34153,35095,44523,45409,47959,61166,66363,70790,72253,73901,78230,79850,82395,87728,89241,89464,90670,92259,92681,99907,103171,114543,116795,118838,120960,124531,127133,130096,131149,133634,136871,185112,186760,201012,240945,309294,395886,478284,
#Partially deleted in new
chr18	10670247	11148762	chr18:10670247-11148762	1	-	10671526	11066133	789624	53	1532,184,80,129,173,93,189,148,159,215,148,133,253,183,259,411,167,167,60,115,107,72,122,90,160,97,244,166,102,205,201,126,177,2,165,218,174,149,287,124,231,149,139,39,120,163,214,211,163,43,126,96,238,	0,2442,4961,7499,9951,11413,11856,19407,20977,25826,26144,27500,28677,31741,34146,35088,44516,45402,47952,61159,66356,70783,72246,73894,78223,79843,82388,87721,89234,89457,90663,92252,92674,93029,99896,103164,114536,116788,118831,120953,124524,127126,130089,131142,133627,136864,185105,186753,201005,240938,309287,395879,478277,
#Partially deleted in new
chr18	10671125	10701981	chr18:10671125-10701981	0	-	10671125	10671125	8553170	14	654,184,80,129,173,93,189,148,159,215,148,133,253,113,	0,1564,4083,6621,9073,10535,10978,18529,20099,24948,25266,26622,27799,30743,
#Partially deleted in new
chr18	10671526	11148588	chr18:10671526-11148588	3	-	10671526	11148588	789624	52	253,184,80,129,173,93,189,148,159,215,148,133,253,183,259,411,167,167,60,115,107,72,122,90,160,97,244,166,102,205,201,126,177,161,218,174,149,287,124,231,149,139,39,120,163,214,211,163,43,126,96,64,	0,1163,3682,6220,8672,10134,10577,18128,19698,24547,24865,26221,27398,30462,32867,33809,43237,44123,46673,59880,65077,69504,70967,72615,76944,78564,81109,86442,87955,88178,89384,90973,91395,98621,101885,113257,115509,117552,119674,123245,125847,128810,129863,132348,135585,183826,185474,199726,239659,308008,394600,476998,
#Partially deleted in new
chr18	10671526	11148588	chr18:10671526-11148588	1	-	10671526	11148588	789624	54	253,184,80,129,173,93,189,148,159,215,148,133,253,183,259,411,167,167,60,115,107,72,122,90,160,97,244,166,102,205,201,126,177,161,218,33,42,174,149,287,124,231,149,139,39,120,163,214,211,163,43,126,96,64,	0,1163,3682,6220,8672,10134,10577,18128,19698,24547,24865,26221,27398,30462,32867,33809,43237,44123,46673,59880,65077,69504,70967,72615,76944,78564,81109,86442,87955,88178,89384,90973,91395,98621,101885,102479,108798,113257,115509,117552,119674,123245,125847,128810,129863,132348,135585,183826,185474,199726,239659,308008,394600,476998,
#Partially deleted in new
chr18	10671526	11148588	chr18:10671526-11148588	0	-	10744199	11148588	789624	54	253,184,80,129,173,93,189,148,159,215,148,133,253,183,259,411,165,167,167,60,115,107,72,122,85,164,97,244,166,102,205,201,126,177,161,218,42,174,149,287,124,231,149,139,39,120,163,214,211,163,43,126,96,64,	0,1163,3682,6220,8672,10134,10577,18128,19698,24547,24865,26221,27398,30462,32867,33809,36748,43237,44123,46673,59880,65077,69504,70967,72615,76940,78564,81109,86442,87955,88178,89384,90973,91395,98621,101885,108798,113257,115509,117552,119674,123245,125847,128810,129863,132348,135585,183826,185474,199726,239659,308008,394600,476998,
#Partially deleted in new
chr18	10671698	10680363	chr18:10671698-10680363	0	-	10677867	10680363	789624	5	81,184,80,129,89,	0,991,3510,6048,8576,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	10677516	10681728	chr18:10677516-10681728	0	-	10677516	10677516	8553170	3	359,173,68,	0,2682,4144,
#Partially deleted in new
chr18	10704296	10709599	chr18:10704296-10709599	3	+	10704296	10704296	8553170	3	37,371,415,	0,1047,4888,
#Deleted in new
chr18	10705335	10714930	chr18:10705335-10714930	0	-	10705335	10714930	789624	3	411,165,167,	0,2939,9428,
#Deleted in new
chr18	10724618	10726936	chr18:10724618-10726936	7	+	10724618	10724618	16724991	2	844,569,	0,1749,
#Deleted in new
chr18	10726631	10728539	chr18:10726631-10728539	5	+	10726631	10726631	16724991	1	1908,	0,
#Partially deleted in new
chr18	10737662	10748500	chr18:10737662-10748500	0	-	10740884	10748500	789624	4	3440,122,90,30,	0,4831,6479,10808,
#Deleted in new
chr18	10759583	10759649	chr18:10759583-10759649	3	-	10759583	10759583	5263520	1	66,	0,
#Partially deleted in new
chr18	10769759	10773564	chr18:10769759-10773564	0	-	10769759	10769759	8553170	2	549,153,	0,3652,
#Partially deleted in new
chr18	10773530	10791650	chr18:10773530-10791650	0	-	10773530	10773530	8553170	6	99,174,149,287,124,188,	0,11253,13505,15548,17670,17932,
#Partially deleted in new
chr18	10797496	10855436	chr18:10797496-10855436	0	-	10797496	10855436	789624	5	26,139,120,163,84,	0,2840,6378,9615,57856,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	10893616	10894805	chr18:10893616-10894805	1	+	10893616	10893616	8553170	2	58,294,	0,895,
#Partially deleted in new
chr18	10893616	10908783	chr18:10893616-10908783	3	+	10893616	10893616	8553170	2	58,448,	0,14719,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	11326269	11328832	chr18:11326269-11328832	7	+	11326269	11326269	16724991	3	520,1042,85,	0,1107,2478,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	11366912	11378409	chr18:11366912-11378409	3	-	11366912	11366912	8553170	3	535,120,155,	0,1620,11342,
#Deleted in new
chr18	11390032	11390729	chr18:11390032-11390729	3	-	11390032	11390032	8553170	1	697,	0,
#Partially deleted in new
chr18	11447755	11489369	chr18:11447755-11489369	3	-	11447755	11447755	8553170	2	235,44,	0,41570,
#Partially deleted in new
chr18	11454477	11465996	chr18:11454477-11465996	3	+	11454477	11454477	789624	4	56,87,234,127,	0,274,10799,11392,
#Partially deleted in new
chr18	11488569	11506976	chr18:11488569-11506976	3	+	11488569	11488569	789624	5	26,89,151,105,220,	0,264,15164,17962,18187,
#Deleted in new
chr18	11490047	11490893	chr18:11490047-11490893	1	+	11490047	11490047	8553170	2	194,514,	0,332,
#Partially deleted in new
chr18	11490073	11505059	chr18:11490073-11505059	0	+	11490073	11490073	8553170	3	168,151,232,	0,13660,14754,
#Partially deleted in new
chr18	11490109	11506983	chr18:11490109-11506983	0	+	11490109	11490109	789624	3	132,105,227,	0,16422,16647,
#Deleted in new
chr18	11490223	11491789	chr18:11490223-11491789	1	+	11490223	11490223	8553170	3	18,196,227,	0,546,1339,
#Deleted in new
chr18	11505778	11506968	chr18:11505778-11506968	0	+	11505778	11505778	8553170	3	146,105,212,	0,753,978,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	11552365	11552847	chr18:11552365-11552847	7	+	11552365	11552365	16724991	1	482,	0,
#Deleted in new
chr18	11609595	11610612	chr18:11609595-11610612	3	+	11609595	11610612	789624	1	1017,	0,
#Deleted in new
chr18	11618207	11618315	chr18:11618207-11618315	7	+	11618207	11618207	16724991	1	108,	0,
#Partially deleted in new
chr18	11619508	11639699	chr18:11619508-11639699	7	-	11619508	11619508	16724991	8	411,36,61,196,100,129,158,38,	0,1762,1907,6067,6375,10137,19833,20153,
#Partially deleted in new
chr18	11619714	11639461	chr18:11619714-11639461	5	-	11619714	11619714	16724991	7	205,36,38,196,100,133,120,	0,1556,1701,5861,6169,9927,19627,
#Deleted in new
chr18	11620716	11621158	chr18:11620716-11621158	3	-	11620716	11620716	8553170	2	257,39,	0,403,
#Deleted in new
chr18	11644335	11644824	chr18:11644335-11644824	7	+	11644335	11644335	16724991	1	489,	0,
#Deleted in new
chr18	11654884	11654941	chr18:11654884-11654941	3	-	11654884	11654884	5263520	1	57,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	11666455	11670165	chr18:11666455-11670165	3	-	11666455	11666455	8553170	1	3710,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr18	11688955	11885685	chr18:11688955-11885685	1	+	11689563	11881135	789624	12	984,73,55,120,98,55,74,59,121,131,68,4697,	0,63897,64672,64870,135962,173439,175577,178212,179587,183312,187665,192033,
#Partially deleted in new
chr18	11689689	11702291	chr18:11689689-11702291	0	+	11689689	11689689	8553170	2	250,221,	0,12381,
#Partially deleted in new
chr18	11745625	11747581	chr18:11745625-11747581	7	+	11745625	11745625	16724991	2	704,914,	0,1042,
#Partially deleted in new
chr18	11751471	11881135	chr18:11751471-11881135	1	+	11752433	11881135	789624	13	37,247,73,55,120,98,55,74,59,121,131,68,147,	0,860,1381,2156,2354,73446,110923,113061,115696,117071,120796,125149,129517,
#Partially deleted in new
chr18	11751507	11881410	chr18:11751507-11881410	3	+	11752433	11881135	789624	13	199,247,73,55,120,98,55,74,59,121,131,68,422,	0,824,1345,2120,2318,73410,110887,113025,115660,117035,120760,125113,129481,
#Partially deleted in new
chr18	11752112	11881923	chr18:11752112-11881923	1	+	11752433	11881135	789624	12	466,73,55,120,98,55,74,59,121,131,68,935,	0,740,1515,1713,72805,110282,112420,115055,116430,120155,124508,128876,
#Partially deleted in new
chr18	11752805	11868584	chr18:11752805-11868584	0	+	11752890	11868584	789624	8	120,55,120,98,55,74,59,42,	0,822,1020,72112,109589,111727,114362,115737,
#Partially deleted in new
chr18	11752883	11833667	chr18:11752883-11833667	0	+	11752883	11752883	8553170	5	42,55,120,98,162,	0,744,942,72034,80622,
#Partially deleted in new
chr18	11753547	11868586	chr18:11753547-11868586	0	+	11753840	11868586	789624	7	135,120,98,55,74,59,44,	0,278,71370,108847,110985,113620,114995,
#Partially deleted in new
chr18	11810405	11811484	chr18:11810405-11811484	3	-	11810405	11810405	8553170	2	471,97,	0,982,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	11851395	11854449	chr18:11851395-11854449	3	+	11851511	11852111	0	1	3054,	0,
#Deleted in new
chr18	11851413	11852751	chr18:11851413-11852751	3	-	11851413	11851413	8553170	2	34,519,	0,819,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	11853778	11854350	chr18:11853778-11854350	0	+	11853778	11853778	8553170	2	187,248,	0,324,
#Deleted in new
chr18	11857154	11857554	chr18:11857154-11857554	3	-	11857154	11857154	8553170	1	400,	0,
#Partially deleted in new
chr18	11857439	11881172	chr18:11857439-11881172	1	+	11867168	11881135	789624	8	346,55,74,59,121,131,68,184,	0,4955,7093,9728,11103,14828,19181,23549,
#Deleted in new
chr18	11872300	11874403	chr18:11872300-11874403	0	+	11872300	11874116	789624	2	98,353,	0,1750,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr18	11882621	11909223	chr18:11882621-11909223	3	-	11884444	11897264	789624	11	2006,141,123,66,109,75,104,109,373,107,1023,	0,3054,3877,4091,4295,6047,6765,10846,14362,23581,25579,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	11883470	11908349	chr18:11883470-11908349	1	-	11884444	11897264	789624	9	1157,141,109,75,104,109,373,107,149,	0,2205,3446,5198,5916,9997,13513,22732,24730,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr18	11883689	11908317	chr18:11883689-11908317	0	-	11885028	11897264	789624	12	938,165,141,123,66,109,75,104,109,373,107,117,	0,1189,1986,2809,3023,3227,4979,5697,9778,13294,22513,24511,
#Partially deleted in new
chr18	11884052	11908350	chr18:11884052-11908350	1	-	11884444	11897264	789624	8	575,141,109,75,104,109,373,150,	0,1623,2864,4616,5334,9415,12931,24148,
#Partially deleted in new
chr18	11884067	11908330	chr18:11884067-11908330	1	-	11884444	11897264	789624	10	560,141,123,109,75,104,109,373,107,130,	0,1608,2431,2849,4601,5319,9400,12916,22135,24133,
#Deleted in new
chr18	11884165	11885121	chr18:11884165-11885121	0	-	11884165	11884165	8553170	2	462,243,	0,713,
#Partially deleted in new
chr18	11884194	11897277	chr18:11884194-11897277	0	-	11884194	11884194	8553170	7	433,165,1350,75,104,109,294,	0,684,1481,4474,5192,9273,12789,
#Deleted in new
chr18	11884489	11886796	chr18:11884489-11886796	0	-	11885873	11886796	789624	4	138,237,123,84,	0,1186,2009,2223,
#Partially deleted in new
chr18	11884876	11897163	chr18:11884876-11897163	0	-	11884876	11884876	8553170	8	167,141,280,109,75,104,109,180,	0,799,1622,2040,3792,4510,8591,12107,
#Deleted in new
chr18	11884892	11889415	chr18:11884892-11889415	0	-	11885028	11889415	789624	6	151,141,123,69,109,29,	0,783,1606,1820,2024,4494,
#Partially deleted in new
chr18	11885759	11908273	chr18:11885759-11908273	0	-	11885759	11897264	789624	9	57,123,66,109,75,104,109,373,73,	0,739,953,1157,2909,3627,7708,11224,22441,
#Partially deleted in new
chr18	11886114	11908315	chr18:11886114-11908315	0	-	11886114	11886114	8553170	9	507,69,109,75,104,109,373,107,115,	0,598,802,2554,3272,7353,10869,20088,22086,
#Partially deleted in new
chr18	11888703	11908350	chr18:11888703-11908350	0	-	11888703	11897264	789624	7	40,104,109,373,216,107,150,	0,683,4764,8280,17034,17499,19497,
#Partially deleted in new
chr18	11889386	11908348	chr18:11889386-11908348	0	-	11889386	11897264	789624	7	104,109,373,95,216,107,148,	0,4081,7597,8139,16351,16816,18814,
#Partially deleted in new
chr18	11889455	11908366	chr18:11889455-11908366	0	-	11889455	11897264	789624	6	35,109,373,95,107,166,	0,4012,7528,8070,16747,18745,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	11891185	11897160	chr18:11891185-11897160	0	-	11891185	11891185	8553170	3	285,109,177,	0,2282,5798,
#Partially deleted in new
chr18	11893047	11897091	chr18:11893047-11897091	0	-	11893047	11893047	8553170	2	529,108,	0,3936,
#Partially deleted in new
chr18	11896982	11908308	chr18:11896982-11908308	0	-	11896982	11897264	789624	6	374,95,92,42,107,108,	0,543,5284,8929,9220,11218,
#Partially deleted in new
chr18	11896988	11908331	chr18:11896988-11908331	0	-	11896988	11897264	789624	4	368,92,107,131,	0,5278,9214,11212,
#Partially deleted in new
chr18	11897035	11908347	chr18:11897035-11908347	0	-	11897035	11897035	8553170	4	85,216,107,147,	0,8702,9167,11165,
#Partially deleted in new
chr18	11897055	11902755	chr18:11897055-11902755	0	-	11897055	11897264	789624	3	301,95,171,	0,470,5529,
#Partially deleted in new
chr18	11897058	11908317	chr18:11897058-11908317	0	-	11897058	11897264	789624	4	298,42,107,117,	0,8853,9144,11142,
#Partially deleted in new
chr18	11897185	11908301	chr18:11897185-11908301	0	-	11897185	11897264	789624	3	171,107,101,	0,9017,11015,
#Partially deleted in new
chr18	11897326	11908315	chr18:11897326-11908315	0	-	11897326	11897326	8553170	5	30,112,216,107,115,	0,8020,8411,8876,10874,
#Partially deleted in new
chr18	11902748	11908347	chr18:11902748-11908347	0	-	11902748	11902748	8553170	4	108,216,107,147,	0,2989,3454,5452,
#Partially deleted in new
chr18	11902779	11908276	chr18:11902779-11908276	0	-	11902779	11902779	8553170	3	77,107,381,	0,3423,5116,
#Partially deleted in new
chr18	11905825	11908315	chr18:11905825-11908315	0	-	11905825	11905825	8553170	2	484,115,	0,2375,
#Deleted in new
chr18	11908711	11909223	chr18:11908711-11909223	3	+	11908711	11908711	8553170	1	512,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	11910633	11914344	chr18:11910633-11914344	3	-	11910633	11910633	8553170	2	229,150,	0,3561,
#Partially deleted in new
chr18	11928837	11929476	chr18:11928837-11929476	7	+	11928837	11928837	16724991	2	198,131,	0,508,
#Partially deleted in new
chr18	11981024	12028118	chr18:11981024-12028118	0	+	11981024	11981024	8553170	6	181,134,105,46,109,76,	0,18029,28858,31145,33240,47018,
#Partially deleted in new
chr18	11981036	12030516	chr18:11981036-12030516	1	+	12028119	12030458	789624	8	94,134,105,46,109,109,152,174,	0,18017,28846,31133,33228,47006,47805,49306,
#Partially deleted in new
chr18	11981427	12030883	chr18:11981427-12030883	3	+	11981669	12030458	0	8	338,134,105,46,109,109,152,541,	0,17626,28455,30742,32837,46615,47414,48915,
#Partially deleted in new
chr18	11981427	12008360	chr18:11981427-12008360	1	+	11981669	12008360	789624	3	338,134,28,	0,17626,26905,
#Partially deleted in new
chr18	11981464	12030868	chr18:11981464-12030868	0	+	11981669	12012326	789624	8	301,134,105,180,109,109,152,526,	0,17589,28418,30705,32800,46578,47377,48878,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	11981515	12018285	chr18:11981515-12018285	0	+	11981669	12008360	789624	7	250,134,259,105,46,109,672,	0,17538,26817,28367,30654,32749,36098,
#Partially deleted in new
chr18	11981610	12030473	chr18:11981610-12030473	0	+	11981669	12014280	789624	7	155,134,105,109,109,152,131,	0,17443,28272,32654,46432,47231,48732,
#Partially deleted in new
chr18	11981669	12030458	chr18:11981669-12030458	1	+	12028119	12030458	789624	8	24,126,105,46,109,109,152,116,	0,17392,28213,30500,32595,46373,47172,48673,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	11993987	11994938	chr18:11993987-11994938	3	-	11993987	11993987	8553170	2	385,143,	0,808,
#Partially deleted in new
chr18	11999135	12010221	chr18:11999135-12010221	0	+	11999135	11999135	8553170	2	52,339,	0,10747,
#Partially deleted in new
chr18	12009899	12028684	chr18:12009899-12028684	0	+	12009899	12009899	8553170	4	88,46,109,642,	0,2270,4365,18143,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	12009930	12028962	chr18:12009930-12028962	0	+	12009930	12028088	789624	6	57,46,109,121,109,121,	0,2239,4334,11771,18112,18911,
#Partially deleted in new
chr18	12028607	12030875	chr18:12028607-12030875	0	+	12028607	12028607	8553170	2	386,533,	0,1735,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	12031177	12032181	chr18:12031177-12032181	3	-	12031177	12031177	8553170	2	41,486,	0,518,
#Deleted in new
chr18	12040100	12040300	chr18:12040100-12040300	7	-	12040100	12040100	16724991	1	200,	0,
#Deleted in new
chr18	12050308	12050672	chr18:12050308-12050672	7	-	12050308	12050308	16724991	1	364,	0,
#Deleted in new
chr18	12056675	12057822	chr18:12056675-12057822	7	-	12056675	12056675	16724991	1	1147,	0,
#Deleted in new
chr18	12067172	12068417	chr18:12067172-12068417	7	-	12067172	12067172	16724991	2	1087,61,	0,1184,
#Deleted in new
chr18	12073231	12076596	chr18:12073231-12076596	7	-	12073231	12073231	16724991	1	3365,	0,
#Deleted in new
chr18	12075204	12076654	chr18:12075204-12076654	5	-	12075204	12075204	16724991	1	1450,	0,
#Partially deleted in new
chr18	12081539	12085267	chr18:12081539-12085267	3	+	12081539	12081539	8553170	3	119,43,96,	0,257,3632,
#Deleted in new
chr18	12091673	12093141	chr18:12091673-12093141	7	-	12091673	12091673	16724991	1	1468,	0,
#Partially deleted in new
chr18	12093852	12127939	chr18:12093852-12127939	3	+	12094017	12127939	789624	14	383,115,174,107,138,68,71,173,34,142,214,184,924,192,	0,1318,1584,2343,3787,5762,9305,13442,21235,21540,28450,30284,31607,33895,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	12098426	12098532	chr18:12098426-12098532	3	+	12098426	12098426	8553170	1	106,	0,
#Deleted in new
chr18	12101996	12102470	chr18:12101996-12102470	7	-	12101996	12101996	16724991	1	474,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	12102705	12129749	chr18:12102705-12129749	0	+	12102705	12102705	8553170	9	83,71,173,34,142,214,184,924,2002,	0,452,4589,12382,12687,19597,21431,22754,25042,
#Deleted in new
chr18	12192202	12192934	chr18:12192202-12192934	7	-	12192202	12192202	16724991	1	732,	0,
#Deleted in new
chr18	12199344	12200089	chr18:12199344-12200089	3	+	12199344	12199344	8553170	1	745,	0,
#Partially deleted in new
chr18	12200778	12201979	chr18:12200778-12201979	3	+	12200778	12200778	8553170	2	396,26,	0,1175,
#Partially deleted in new
chr18	12201981	12212072	chr18:12201981-12212072	5	+	12201981	12201981	16724991	3	97,96,221,	0,7383,9870,
#Duplicated in new
chr18	12208397	12212465	chr18:12208397-12212465	4	+	12208397	12208397	16724991	3	97,96,614,	0,967,3454,
#Partially deleted in new
chr18	12209335	12223539	chr18:12209335-12223539	7	+	12209335	12209335	16724991	3	125,185,740,	0,9312,13464,
#Deleted in new
chr18	12211377	12211807	chr18:12211377-12211807	7	+	12211377	12211377	16724991	1	430,	0,
#Partially deleted in new
chr18	12213406	12222998	chr18:12213406-12222998	5	+	12213406	12213406	16724991	4	191,136,169,223,	0,1420,5251,9369,
#Partially deleted in new
chr18	12218651	12223251	chr18:12218651-12223251	4	+	12218651	12218651	16724991	2	179,452,	0,4148,
#Deleted in new
chr18	12230410	12231573	chr18:12230410-12231573	3	-	12230410	12230410	8553170	2	443,42,	0,1121,
#Deleted in new
chr18	12246588	12247055	chr18:12246588-12247055	7	+	12246588	12246588	16724991	1	467,	0,
#Partially deleted in new
chr18	12254318	12277373	chr18:12254318-12277373	3	+	12254383	12277270	0	5	103,145,147,182,251,	0,8506,9988,19774,22804,
#Partially deleted in new
chr18	12254360	12277593	chr18:12254360-12277593	0	+	12254383	12262854	789624	6	596,145,267,147,182,471,	0,8464,9239,9946,19732,22762,
#Partially deleted in new
chr18	12254701	12277595	chr18:12254701-12277595	0	+	12254701	12254701	8553170	5	255,145,147,182,473,	0,8123,9605,19391,22421,
#Partially deleted in new
chr18	12254724	12277481	chr18:12254724-12277481	0	+	12254724	12254724	8553170	4	232,145,147,359,	0,8100,9582,22398,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	12279426	12282739	chr18:12279426-12282739	3	+	12279426	12279426	8553170	1	3313,	0,
#Partially deleted in new
chr18	12288307	12291488	chr18:12288307-12291488	3	+	12288307	12288307	8553170	2	347,386,	0,2795,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	12304090	12304194	chr18:12304090-12304194	3	-	12304090	12304090	8553170	1	104,	0,
#Partially deleted in new
chr18	12307668	12325181	chr18:12307668-12325181	0	+	12308292	12325181	789624	5	101,88,109,111,115,	0,593,1018,3274,17398,
#Partially deleted in new
chr18	12308058	12326619	chr18:12308058-12326619	1	+	12308292	12326130	789624	4	291,109,111,1553,	0,628,2884,17008,
#Partially deleted in new
chr18	12308231	12325914	chr18:12308231-12325914	0	+	12308292	12325914	789624	3	118,109,848,	0,455,16835,
#Partially deleted in new
chr18	12308233	12329826	chr18:12308233-12329826	1	+	12308292	12329183	789624	4	116,109,111,681,	0,453,2709,20912,
#Partially deleted in new
chr18	12308240	12326563	chr18:12308240-12326563	0	+	12308240	12308240	8553170	3	555,111,1497,	0,2702,16826,
#Partially deleted in new
chr18	12308240	12325267	chr18:12308240-12325267	1	+	12308292	12324822	789624	4	109,109,111,459,	0,446,2702,16568,
#Partially deleted in new
chr18	12308240	12325763	chr18:12308240-12325763	0	+	12308292	12320684	789624	5	109,109,111,209,955,	0,446,2702,12295,16568,
#Partially deleted in new
chr18	12308240	12325197	chr18:12308240-12325197	0	+	12308292	12320684	789624	5	109,109,111,116,131,	0,446,2702,12388,16826,
#Partially deleted in new
chr18	12308243	12311135	chr18:12308243-12311135	0	+	12308243	12308243	8553170	3	106,109,193,	0,443,2699,
#Partially deleted in new
chr18	12308246	12325124	chr18:12308246-12325124	1	+	12308292	12325004	789624	4	103,109,111,158,	0,440,2696,16720,
#Partially deleted in new
chr18	12308252	12337225	chr18:12308252-12337225	1	+	12308292	12337183	789624	4	97,109,111,113,	0,434,2690,28860,
#Partially deleted in new
chr18	12308261	12326332	chr18:12308261-12326332	1	+	12308292	12325282	789624	5	88,109,111,34,1150,	0,425,2681,16805,16921,
#Partially deleted in new
chr18	12308262	12325353	chr18:12308262-12325353	0	+	12310992	12325353	789624	3	87,111,287,	0,2680,16804,
#Partially deleted in new
chr18	12310966	12344320	chr18:12310966-12344320	2	+	12310966	12344056	789624	2	87,272,	0,33082,
#Partially deleted in new
chr18	12328943	12377314	chr18:12328943-12377314	3	-	12329564	12377082	0	17	840,195,201,116,111,126,108,154,138,274,125,75,153,107,78,100,346,	0,8397,11257,15188,19329,22141,22362,24061,27750,29726,30983,34838,38021,38332,41905,42648,48025,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	12340936	12348328	chr18:12340936-12348328	0	-	12340936	12340936	8553170	2	3311,56,	0,7336,
#Partially deleted in new
chr18	12358703	12377002	chr18:12358703-12377002	0	-	12358703	12377002	789624	5	240,125,75,153,34,	0,1223,5078,8261,18265,
#Partially deleted in new
chr18	12358804	12360233	chr18:12358804-12360233	0	-	12358804	12358804	8553170	2	139,307,	0,1122,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	12400411	12400473	chr18:12400411-12400473	3	+	12400411	12400411	8553170	1	62,	0,
#Partially deleted in new
chr18	12407895	12432235	chr18:12407895-12432235	3	+	12407975	12429403	0	7	112,169,90,71,103,84,1086,	0,12429,13644,19145,19325,21454,23254,
#Partially deleted in new
chr18	12407895	12432233	chr18:12407895-12432233	1	+	12407975	12429403	0	7	112,169,90,71,103,87,1084,	0,12429,13644,19145,19325,21454,23254,
#Partially deleted in new
chr18	12407895	12431463	chr18:12407895-12431463	1	+	12421608	12429403	789624	6	112,90,71,103,87,314,	0,13644,19145,19325,21454,23254,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	12407944	12427106	chr18:12407944-12427106	0	+	12407975	12427106	789624	5	63,141,169,90,66,	0,2773,12380,13595,19096,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	12419891	12427322	chr18:12419891-12427322	0	+	12420355	12427322	789624	5	56,169,90,71,102,	0,433,1648,7149,7329,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	12419932	12432238	chr18:12419932-12432238	1	+	12420355	12429403	0	6	561,90,71,103,87,1089,	0,1607,7108,7288,9417,11217,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	12420016	12429364	chr18:12420016-12429364	0	+	12420053	12429364	789624	6	132,169,90,71,103,15,	0,308,1523,7024,7204,9333,
#Partially deleted in new
chr18	12421285	12432238	chr18:12421285-12432238	1	+	12421608	12429403	789624	5	344,71,103,87,1089,	0,5755,5935,8064,9864,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	12438889	12443536	chr18:12438889-12443536	1	+	12438889	12438889	8553170	2	217,144,	0,4503,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	12442971	12447798	chr18:12442971-12447798	1	+	12442971	12442971	8553170	3	301,183,255,	0,421,4572,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	12443295	12448205	chr18:12443295-12448205	3	+	12443295	12443295	8553170	1	4910,	0,
#Partially deleted in new
chr18	12446511	12658134	chr18:12446511-12658134	1	-	12449637	12657866	0	17	3385,137,28,71,138,143,91,173,42,130,87,165,78,126,231,35,605,	0,5743,5973,6556,7834,16839,18356,33187,39447,46560,49504,59965,65942,88964,100162,188550,211018,
#Partially deleted in new
chr18	12446512	12658045	chr18:12446512-12658045	3	-	12449637	12657866	0	16	3384,137,28,71,138,143,91,173,130,87,165,78,126,231,35,516,	0,5742,5972,6555,7833,16838,18355,33186,46559,49503,59964,65941,88963,100161,188549,211017,
#Partially deleted in new
chr18	12449503	12656732	chr18:12449503-12656732	1	-	12449637	12635073	789624	15	393,137,28,71,138,143,91,173,130,87,165,78,126,35,82,	0,2751,2981,3564,4842,13847,15364,30195,43568,46512,56973,62950,85972,185558,207147,
#Partially deleted in new
chr18	12449505	12636340	chr18:12449505-12636340	0	-	12452394	12546799	0	16	391,189,71,138,143,91,173,130,87,165,78,126,231,44,35,17,	0,2749,3562,4840,13845,15362,30193,43566,46510,56971,62948,85970,97168,138870,185556,186818,
#Partially deleted in new
chr18	12449508	12656736	chr18:12449508-12656736	1	-	12449637	12635073	0	16	388,137,28,71,138,143,91,173,130,87,165,78,126,231,35,86,	0,2746,2976,3559,4837,13842,15359,30190,43563,46507,56968,62945,85967,97165,185553,207142,
#Partially deleted in new
chr18	12449572	12452610	chr18:12449572-12452610	0	-	12449572	12449572	8553170	3	324,137,126,	0,2682,2912,
#Partially deleted in new
chr18	12449665	12493149	chr18:12449665-12493149	0	-	12449665	12449665	8553170	10	231,137,28,71,138,174,143,91,173,78,	0,2589,2819,3402,4680,10089,13685,15202,30033,43406,
#Partially deleted in new
chr18	12449667	12506519	chr18:12449667-12506519	0	-	12454376	12506519	789624	8	229,137,28,71,138,130,87,43,	0,2587,2817,3400,4678,43404,46348,56809,
#Partially deleted in new
chr18	12449809	12454506	chr18:12449809-12454506	0	-	12449809	12449809	8553170	5	87,137,28,71,161,	0,2445,2675,3258,4536,
#Deleted in new
chr18	12450446	12451042	chr18:12450446-12451042	7	+	12450446	12450446	16724991	1	596,	0,
#Partially deleted in new
chr18	12493138	12516225	chr18:12493138-12516225	0	-	12493138	12493138	8553170	5	63,87,165,78,155,	0,2877,13338,19315,22932,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	12506495	12653085	chr18:12506495-12653085	0	-	12506495	12635073	789624	6	146,78,126,231,35,85,	0,5958,28980,40178,128566,146505,
#Partially deleted in new
chr18	12512512	12656728	chr18:12512512-12656728	0	-	12512512	12653414	789624	6	19,126,231,35,57,78,	0,22963,34161,122549,140871,144138,
#Partially deleted in new
chr18	12535477	12656720	chr18:12535477-12656720	0	-	12535477	12635073	789624	4	124,231,35,146,	0,11196,99584,121097,
#Deleted in new
chr18	12658192	12658893	chr18:12658192-12658893	0	+	12658192	12658192	8553170	2	151,320,	0,381,
#Deleted in new
chr18	12658245	12658713	chr18:12658245-12658713	0	+	12658245	12658245	8553170	2	98,163,	0,305,
#Partially deleted in new
chr18	12658737	12725740	chr18:12658737-12725740	1	+	12706585	12725531	789624	7	36,172,59,119,174,121,302,	0,47812,53964,59779,61772,65761,66701,
#Partially deleted in new
chr18	12658737	12686491	chr18:12658737-12686491	0	+	12658737	12658737	8553170	3	36,75,217,	0,6327,27537,
#Partially deleted in new
chr18	12661832	12702639	chr18:12661832-12702639	0	-	12699894	12702548	789624	13	337,116,218,334,167,189,129,98,186,225,71,156,154,	0,11555,12703,16276,18829,24429,29526,33421,35390,37146,37997,39125,40653,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	12670425	12671145	chr18:12670425-12671145	3	-	12670425	12670425	8553170	1	720,	0,
#Partially deleted in new
chr18	12672631	12702774	chr18:12672631-12702774	3	-	12673364	12702548	789624	12	872,218,334,167,189,129,98,186,225,76,156,289,	0,1904,5477,8030,13630,18727,22622,24591,26347,27198,28326,29854,
#Partially deleted in new
chr18	12673096	12702722	chr18:12673096-12702722	1	-	12673364	12702548	789624	11	407,218,334,167,189,129,98,186,76,156,237,	0,1439,5012,7565,13165,18262,22157,24126,26733,27861,29389,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	12674535	12679290	chr18:12674535-12679290	0	-	12674535	12674535	8553170	3	218,334,265,	0,3573,4490,
#Partially deleted in new
chr18	12678330	12695319	chr18:12678330-12695319	0	-	12678330	12695319	789624	4	112,167,189,66,	0,2331,7931,16923,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	12684295	12702667	chr18:12684295-12702667	0	-	12699894	12702548	789624	9	2155,129,145,98,186,187,71,156,182,	0,7063,7872,10958,12927,14683,15534,16662,18190,
#Partially deleted in new
chr18	12686652	12724520	chr18:12686652-12724520	0	+	12686671	12724520	789624	6	100,172,59,119,174,22,	0,19897,26049,31864,33857,37846,
#Partially deleted in new
chr18	12691232	12699123	chr18:12691232-12699123	0	-	12691340	12699123	789624	4	255,98,186,145,	0,4021,5990,7746,
#Partially deleted in new
chr18	12691232	12697288	chr18:12691232-12697288	0	-	12691340	12697288	789624	3	255,98,60,	0,4021,5996,
#Partially deleted in new
chr18	12691432	12700367	chr18:12691432-12700367	0	-	12691432	12691432	8553170	6	55,98,186,225,76,191,	0,3821,5790,7546,8397,8744,
#Partially deleted in new
chr18	12697311	12702756	chr18:12697311-12702756	0	-	12699121	12702548	789624	5	97,187,76,156,271,	0,1667,2518,3646,5174,
#Partially deleted in new
chr18	12697311	12700366	chr18:12697311-12700366	0	-	12697311	12697311	8553170	4	97,187,76,190,	0,1667,2518,2865,
#Partially deleted in new
chr18	12698792	12702777	chr18:12698792-12702777	0	-	12698792	12698792	8553170	4	373,76,156,292,	0,1037,2165,3693,
#Partially deleted in new
chr18	12702425	12725740	chr18:12702425-12725740	3	+	12703107	12725531	789624	7	739,172,59,119,174,121,302,	0,4124,10276,16091,18084,22073,23013,
#Partially deleted in new
chr18	12703022	12724868	chr18:12703022-12724868	1	+	12703107	12724640	789624	6	142,172,59,119,174,370,	0,3527,9679,15494,17487,21476,
#Partially deleted in new
chr18	12703025	12725658	chr18:12703025-12725658	0	+	12703107	12724507	789624	5	139,172,59,121,220,	0,3524,9676,21473,22413,
#Deleted in new
chr18	12724127	12725740	chr18:12724127-12725740	0	+	12724127	12724127	8553170	2	492,302,	0,1311,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	12738964	12750068	chr18:12738964-12750068	3	-	12738964	12738964	8553170	2	251,59,	0,11045,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	12739489	12776137	chr18:12739489-12776137	3	-	12739489	12739489	8553170	4	441,240,179,469,	0,9804,25787,36179,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	12760716	12760818	chr18:12760716-12760818	3	+	12760716	12760716	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	12774650	12775923	chr18:12774650-12775923	1	-	12774650	12774650	8553170	1	1273,	0,
#Partially deleted in new
chr18	12785477	12884338	chr18:12785477-12884338	1	-	12785822	12884141	0	10	367,102,182,153,210,135,99,101,91,266,	0,8906,16492,28725,31678,40332,45465,51313,73686,98595,
#Deleted in new
chr18	12785477	12787741	chr18:12785477-12787741	0	-	12785477	12785477	8553170	1	2264,	0,
#Partially deleted in new
chr18	12785480	12884214	chr18:12785480-12884214	1	-	12785822	12884141	0	11	364,102,182,153,210,69,135,99,101,91,142,	0,8903,16489,28722,31675,33733,40329,45462,51310,73683,98592,
#Partially deleted in new
chr18	12785480	12802153	chr18:12785480-12802153	0	-	12793522	12802153	789624	4	364,93,102,184,	0,8001,8903,16489,
#Partially deleted in new
chr18	12785482	12884281	chr18:12785482-12884281	1	-	12785822	12884141	0	9	362,182,153,210,135,99,101,91,209,	0,16487,28720,31673,40327,45460,51308,73681,98590,
#Partially deleted in new
chr18	12785505	12814305	chr18:12785505-12814305	0	-	12788083	12814305	789624	5	339,86,102,182,103,	0,2559,8878,16464,28697,
#Partially deleted in new
chr18	12785684	12836824	chr18:12785684-12836824	0	-	12785822	12836824	789624	5	160,102,182,99,34,	0,8699,16285,45258,51106,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	12792152	12884235	chr18:12792152-12884235	3	-	12794277	12884141	0	9	2333,182,153,210,135,99,101,91,163,	0,9817,22050,25003,33657,38790,44638,67011,91920,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	12792301	12843981	chr18:12792301-12843981	1	-	12794277	12840786	789624	9	2184,182,153,210,135,99,101,249,77,	0,9668,21901,24854,33508,38641,44489,48412,51603,
#Partially deleted in new
chr18	12794111	12883766	chr18:12794111-12883766	1	-	12794277	12831005	789624	11	374,182,153,210,135,99,101,91,77,42,149,	0,7858,20091,23044,31698,36831,42679,65052,68528,78116,89506,
#Partially deleted in new
chr18	12794383	12884235	chr18:12794383-12884235	0	-	12821419	12884141	789624	10	102,182,153,210,90,135,99,101,91,163,	0,7586,19819,22772,26952,31426,36559,42407,64780,89689,
#Partially deleted in new
chr18	12801988	12884222	chr18:12801988-12884222	0	-	12836831	12884141	789624	6	163,153,210,99,101,150,	0,12214,15167,28954,34802,82084,
#Partially deleted in new
chr18	12814324	12884277	chr18:12814324-12884277	0	-	12817262	12884141	789624	7	31,110,135,99,101,91,205,	0,2831,11485,16618,22466,44839,69748,
#Partially deleted in new
chr18	12817180	12884198	chr18:12817180-12884198	0	-	12836831	12884141	789624	5	185,135,99,101,126,	0,8629,13762,19610,66892,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	12825803	12929643	chr18:12825803-12929643	0	-	12825803	12831005	789624	5	141,99,101,91,145,	0,5139,10987,33360,103695,
#Deleted in new
chr18	12836790	12839557	chr18:12836790-12839557	0	-	12836790	12836790	8553170	2	101,56,	0,2711,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	12836823	12862473	chr18:12836823-12862473	0	-	12836823	12836823	8553170	3	68,91,390,	0,22340,25260,
#Partially deleted in new
chr18	12859163	12880692	chr18:12859163-12880692	0	-	12859163	12859163	8553170	2	91,197,	0,21332,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	12859163	12864194	chr18:12859163-12864194	0	-	12859163	12859163	8553170	3	91,105,998,	0,3476,4033,
#Deleted in new
chr18	12911185	12912023	chr18:12911185-12912023	7	+	12911185	12911185	16724991	1	838,	0,
#Deleted in new
chr18	12912843	12913906	chr18:12912843-12913906	7	+	12912843	12912843	16724991	1	1063,	0,
#Partially deleted in new
chr18	12947132	12955610	chr18:12947132-12955610	0	+	12948199	12955610	789624	4	494,94,51,148,	0,1006,4722,8330,
#Partially deleted in new
chr18	12947994	12987536	chr18:12947994-12987536	1	+	12948121	12985252	0	9	238,51,147,212,99,141,158,151,2297,	0,3860,7468,15165,23158,30757,34523,36045,37245,
#Partially deleted in new
chr18	12948013	12971252	chr18:12948013-12971252	0	+	12948121	12971252	789624	4	219,51,212,100,	0,3841,15146,23139,
#Partially deleted in new
chr18	12948020	12987536	chr18:12948020-12987536	3	+	12948121	12987057	0	9	212,51,147,212,99,141,158,151,675,	0,3834,7442,15139,23132,30731,34497,36019,38841,
#Partially deleted in new
chr18	12948035	12971251	chr18:12948035-12971251	0	+	12948121	12971251	789624	4	197,147,212,99,	0,7427,15124,23117,
#Partially deleted in new
chr18	12948047	12978860	chr18:12948047-12978860	0	+	12948121	12978860	789624	7	185,51,147,212,60,99,109,	0,3807,7415,15112,16388,23105,30704,
#Partially deleted in new
chr18	12948504	12971249	chr18:12948504-12971249	0	+	12948504	12948504	8553170	5	282,51,147,212,97,	0,3350,6958,14655,22648,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	12971562	12985718	chr18:12971562-12985718	0	+	12971562	12971562	8553170	6	2993,150,141,158,151,479,	0,4170,7189,10955,12477,13677,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	12976287	12987531	chr18:12976287-12987531	0	+	12976287	12976287	8553170	4	2605,158,151,2292,	0,6230,7752,8952,
#Partially deleted in new
chr18	12978828	12983217	chr18:12978828-12983217	0	+	12978828	12978828	8553170	2	64,700,	0,3689,
#Partially deleted in new
chr18	12984693	12991173	chr18:12984693-12991173	3	-	12984693	12984693	8553170	3	208,164,102,	0,2180,6378,
#Partially deleted in new
chr18	12991361	13125050	chr18:12991361-13125050	3	+	13029827	13124770	789624	44	76,168,126,176,53,121,149,136,125,340,144,65,127,131,823,127,172,919,149,231,126,144,64,140,93,119,174,91,177,261,116,110,151,179,124,106,208,80,96,120,122,127,59,419,	0,8059,10095,17094,21611,23966,25826,27118,27720,38301,39103,45875,49468,50842,57497,58403,61557,64418,66223,67720,76469,76732,76997,77490,77727,78376,79677,81393,81647,95655,96169,98094,101015,104141,104822,108114,108943,112147,113622,122224,122768,125015,126223,133270,
#Partially deleted in new
chr18	12991361	13125036	chr18:12991361-13125036	1	+	12999424	13124770	0	45	76,168,126,176,53,121,149,136,125,340,144,65,210,127,131,823,127,172,919,149,231,126,144,64,140,93,119,174,91,177,261,116,110,151,179,124,106,208,80,96,120,122,127,59,405,	0,8059,10095,17094,21611,23966,25826,27118,27720,38301,39103,45875,47008,49468,50842,57497,58403,61557,64418,66223,67720,76469,76732,76997,77490,77727,78376,79677,81393,81647,95655,96169,98094,101015,104141,104822,108114,108943,112147,113622,122224,122768,125015,126223,133270,
#Partially deleted in new
chr18	12991361	13059314	chr18:12991361-13059314	0	+	12999424	13059314	789624	18	76,168,126,176,53,121,149,136,42,65,127,131,823,127,172,919,149,233,	0,8059,10095,17094,21611,23966,25826,27118,27720,47153,49468,50842,57497,58403,61557,64418,66223,67720,
#Partially deleted in new
chr18	12991376	13008631	chr18:12991376-13008631	0	+	12999424	13000360	789624	5	61,168,175,126,176,	0,8044,8935,10080,17079,
#Partially deleted in new
chr18	13008499	13125052	chr18:13008499-13125052	0	+	13008499	13040852	789624	39	132,53,121,149,136,125,340,144,127,131,823,127,172,919,1728,126,144,64,140,93,119,174,91,177,261,116,110,151,179,124,106,208,80,96,120,122,127,59,421,	0,4473,6828,8688,9980,10582,21163,21965,32330,33704,40359,41265,44419,47280,49085,59331,59594,59859,60352,60589,61238,62539,64255,64509,78517,79031,80956,83877,87003,87684,90976,91805,95009,96484,105086,105630,107877,109085,116132,
#Partially deleted in new
chr18	13029786	13124995	chr18:13029786-13124995	0	+	13029786	13124770	789624	35	216,144,65,127,131,823,127,172,919,149,231,126,144,64,140,93,119,174,91,177,261,116,110,151,179,124,106,208,80,96,120,122,127,59,364,	0,678,7450,11043,12417,19072,19978,23132,25993,27798,29295,38044,38307,38572,39065,39302,39951,41252,42968,43222,57230,57744,59669,62590,65716,66397,69689,70518,73722,75197,83799,84343,86590,87798,94845,
#Deleted in new
chr18	13056630	13059213	chr18:13056630-13059213	0	+	13056630	13058296	789624	4	68,149,142,132,	0,954,1663,2451,
#Partially deleted in new
chr18	13059181	13125034	chr18:13059181-13125034	1	+	13068210	13089470	789624	23	131,126,144,64,140,93,119,174,91,177,261,116,114,151,179,124,106,208,80,96,130,59,403,	0,8649,8912,9177,9670,9907,10556,11857,13573,13827,27835,28349,30270,33195,36321,37002,40294,41123,44327,45802,57192,58403,65450,
#Partially deleted in new
chr18	13059181	13125036	chr18:13059181-13125036	0	+	13059181	13116385	789624	23	131,126,144,64,140,93,119,174,91,177,261,116,110,151,179,124,106,208,80,96,130,59,405,	0,8649,8912,9177,9670,9907,10556,11857,13573,13827,27835,28349,30274,33195,36321,37002,40294,41123,44327,45802,57192,58403,65450,
#Partially deleted in new
chr18	13068414	13092527	chr18:13068414-13092527	0	+	13068414	13068414	8553170	10	8,140,93,119,91,177,261,116,110,151,	0,437,674,1323,4340,4594,18602,19116,21041,23962,
#Partially deleted in new
chr18	13073115	13125036	chr18:13073115-13125036	0	+	13073115	13073115	8553170	17	70,261,116,151,110,151,179,124,106,208,80,96,120,122,127,59,405,	0,13901,14415,15638,16340,19261,22387,23068,26360,27189,30393,31868,40470,41014,43261,44469,51516,
#Partially deleted in new
chr18	13087148	13095685	chr18:13087148-13095685	0	+	13087148	13089470	789624	4	129,110,151,183,	0,2307,5228,8354,
#Partially deleted in new
chr18	13103508	13117612	chr18:13103508-13117612	0	+	13103508	13103508	8553170	5	80,96,120,127,28,	0,1475,10077,12868,14076,
#Partially deleted in new
chr18	13116403	13125030	chr18:13116403-13125030	0	+	13116403	13116403	8553170	3	100,59,544,	0,1181,8083,
#Deleted in new
chr18	13139779	13140489	chr18:13139779-13140489	7	-	13139779	13139779	16724991	1	710,	0,
#Deleted in new
chr18	13151636	13152689	chr18:13151636-13152689	7	-	13151636	13151636	16724991	1	1053,	0,
#Deleted in new
chr18	13183401	13185617	chr18:13183401-13185617	3	-	13183401	13183401	8553170	2	308,158,	0,2058,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	13203773	13216367	chr18:13203773-13216367	3	-	13203773	13203773	8553170	2	1596,256,	0,12338,
#Partially deleted in new
chr18	13214082	13216325	chr18:13214082-13216325	0	-	13214082	13214082	8553170	2	234,214,	0,2029,
#Partially deleted in new
chr18	13217497	13387577	chr18:13217497-13387577	0	+	13217497	13217497	8553170	3	277,84,237,	0,60607,169843,
#Partially deleted in new
chr18	13218025	13621143	chr18:13218025-13621143	0	+	13387722	13621143	789624	5	69,84,422,141,27,	0,60079,169315,220218,403091,
#Partially deleted in new
chr18	13218759	13278376	chr18:13218759-13278376	0	+	13218759	13218759	8553170	2	229,272,	0,59345,
#Partially deleted in new
chr18	13218786	13652755	chr18:13218786-13652755	1	+	13387722	13645657	789624	6	202,84,422,141,155,7629,	0,59318,168554,219457,402330,426340,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	13234944	13236470	chr18:13234944-13236470	3	-	13234944	13234944	8553170	2	181,47,	0,1479,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	13239542	13242076	chr18:13239542-13242076	3	+	13239542	13239542	789624	1	2534,	0,
#Partially deleted in new
chr18	13278102	13652754	chr18:13278102-13652754	3	+	13387722	13645657	789624	6	86,422,141,155,54,7628,	0,109238,160141,343014,365256,367024,
#Deleted in new
chr18	13279414	13280110	chr18:13279414-13280110	3	-	13279414	13279414	8553170	1	696,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	13362202	13366243	chr18:13362202-13366243	3	-	13362202	13362202	8553170	2	381,99,	0,3942,
#Partially deleted in new
chr18	13382553	13438332	chr18:13382553-13438332	0	+	13387722	13438332	789624	3	174,422,89,	0,4787,55690,
#Partially deleted in new
chr18	13419420	13427480	chr18:13419420-13427480	3	-	13419420	13419420	789624	4	1788,119,182,101,	0,4154,6511,7959,
#Deleted in new
chr18	13459946	13460026	chr18:13459946-13460026	3	+	13459946	13459946	5263520	1	80,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	13461019	13470823	chr18:13461019-13470823	3	-	13461019	13461019	8553170	4	227,90,151,30,	0,355,1062,9774,
#Partially deleted in new
chr18	13465014	13621270	chr18:13465014-13621270	0	+	13621166	13621270	789624	4	97,83,238,154,	0,19022,26217,156102,
#Partially deleted in new
chr18	13465024	13491588	chr18:13465024-13491588	0	+	13465024	13465024	8553170	2	87,357,	0,26207,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	13471011	13472709	chr18:13471011-13472709	0	-	13471011	13471011	8553170	1	1698,	0,
#Deleted in new
chr18	13471849	13472670	chr18:13471849-13472670	3	-	13471849	13471849	8553170	2	526,44,	0,777,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	13486461	13490676	chr18:13486461-13490676	3	+	13486461	13486461	8553170	1	4215,	0,
#Deleted in new
chr18	13500640	13501289	chr18:13500640-13501289	3	-	13500640	13500640	8553170	2	365,122,	0,527,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	13514519	13522888	chr18:13514519-13522888	3	-	13514519	13514519	8553170	2	1588,3157,	0,5212,
#Deleted in new
chr18	13526077	13526688	chr18:13526077-13526688	3	+	13526077	13526077	8553170	1	611,	0,
#Partially deleted in new
chr18	13542291	13645205	chr18:13542291-13645205	0	+	13542291	13542291	8553170	5	169,88,155,54,79,	0,43074,78825,101067,102835,
#Deleted in new
chr18	13542406	13543214	chr18:13542406-13543214	0	+	13542406	13542406	8553170	2	54,281,	0,527,
#Deleted in new
chr18	13542915	13543623	chr18:13542915-13543623	0	+	13542915	13542915	8553170	2	155,309,	0,399,
#Partially deleted in new
chr18	13561398	13565035	chr18:13561398-13565035	3	-	13561398	13561398	8553170	3	508,121,36,	0,1481,3601,
#Deleted in new
chr18	13611113	13611200	chr18:13611113-13611200	3	+	13611113	13611113	5263520	1	87,	0,
#Partially deleted in new
chr18	13611463	13645777	chr18:13611463-13645777	1	+	13612704	13645657	789624	4	1311,155,54,651,	0,9653,31895,33663,
#Partially deleted in new
chr18	13611763	13646734	chr18:13611763-13646734	1	+	13621166	13645657	789624	4	301,155,54,1608,	0,9353,31595,33363,
#Deleted in new
chr18	13612028	13615748	chr18:13612028-13615748	0	+	13612028	13612028	8553170	1	3720,	0,
#Partially deleted in new
chr18	13612618	13645659	chr18:13612618-13645659	1	+	13612704	13645657	789624	3	156,155,533,	0,8498,32508,
#Deleted in new
chr18	13612624	13616159	chr18:13612624-13616159	0	+	13612624	13612624	8553170	2	150,399,	0,3136,
#Partially deleted in new
chr18	13620867	13652754	chr18:13620867-13652754	0	+	13620867	13620867	8553170	3	404,54,7628,	0,22491,24259,
#Partially deleted in new
chr18	13620867	13652754	chr18:13620867-13652754	0	+	13620867	13620867	8553170	2	404,7628,	0,24259,
#Partially deleted in new
chr18	13641757	13645712	chr18:13641757-13645712	1	+	13642715	13645657	789624	3	1000,54,586,	0,1601,3369,
#Deleted in new
chr18	13644814	13645685	chr18:13644814-13645685	3	-	13644814	13644814	8553170	2	383,155,	0,716,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	13663346	13726560	chr18:13663346-13726560	1	-	13666479	13682077	789624	5	3367,112,501,128,232,	0,8515,18258,34200,62982,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	13663350	13726592	chr18:13663350-13726592	3	-	13666479	13682077	789624	4	3363,112,501,264,	0,8511,18254,62978,
#Partially deleted in new
chr18	13665882	13726592	chr18:13665882-13726592	0	-	13665882	13665882	8553170	2	831,264,	0,60446,
#Partially deleted in new
chr18	13666002	13726505	chr18:13666002-13726505	0	-	13666002	13666002	8553170	3	711,501,177,	0,15602,60326,
#Partially deleted in new
chr18	13666493	13726586	chr18:13666493-13726586	0	-	13666493	13682077	789624	4	220,112,501,258,	0,5368,15111,59835,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	13710248	13710484	chr18:13710248-13710484	3	-	13710248	13710248	8553170	1	236,	0,
#Partially deleted in new
chr18	13726659	13760285	chr18:13726659-13760285	1	+	13731517	13759979	0	11	70,459,136,126,113,182,165,118,102,34,344,	0,4816,7804,10350,13507,14850,15828,19560,25666,27454,33282,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr18	13726660	13764558	chr18:13726660-13764558	3	+	13731517	13759979	0	12	69,129,459,136,126,113,182,165,118,102,34,4617,	0,3966,4815,7803,10349,13506,14849,15827,19559,25665,27453,33281,
#Partially deleted in new
chr18	13726666	13762344	chr18:13726666-13762344	0	+	13734580	13759979	789624	11	63,136,126,113,182,165,118,102,34,267,306,	0,7797,10343,13500,14843,15821,19553,25659,27447,33275,35372,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr18	13726703	13764556	chr18:13726703-13764556	1	+	13731517	13762160	0	12	26,129,459,136,126,113,182,165,118,102,34,2518,	0,3923,4772,7760,10306,13463,14806,15784,19516,25622,27410,35335,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	13726768	13731821	chr18:13726768-13731821	0	+	13731517	13731821	789624	3	97,129,346,	0,3858,4707,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr18	13730437	13760067	chr18:13730437-13760067	1	+	13731517	13759979	0	11	318,459,136,126,113,182,165,118,102,34,126,	0,1038,4026,6572,9729,11072,12050,15782,21888,23676,29504,
#Partially deleted in new
chr18	13731473	13764555	chr18:13731473-13764555	1	+	13731517	13759979	0	10	461,136,126,113,182,165,118,102,34,4614,	0,2990,5536,8693,10036,11014,14746,20852,22640,28468,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	13741619	13743074	chr18:13741619-13743074	0	+	13741619	13741619	8553170	2	72,587,	0,868,
#Partially deleted in new
chr18	13746272	13762627	chr18:13746272-13762627	0	+	13746272	13762160	789624	4	65,123,34,589,	0,6032,7841,15766,
#Deleted in new
chr18	13762300	13764555	chr18:13762300-13764555	0	+	13762300	13762300	8553170	2	137,444,	0,1811,
#Partially deleted in new
chr18	13824148	13827323	chr18:13824148-13827323	2	+	13825765	13826743	789624	2	126,1597,	0,1578,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	13825543	13826862	chr18:13825543-13826862	1	+	13825765	13826743	789624	1	1319,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	13882043	13915540	chr18:13882043-13915540	3	-	13884624	13885518	789624	2	3603,53,	0,33444,
#Partially deleted in new
chr18	13885148	13915707	chr18:13885148-13915707	0	-	13885148	13885518	789624	2	498,78,	0,30481,
#Deleted in new
chr18	13919602	13919923	chr18:13919602-13919923	7	-	13919602	13919602	16724991	1	321,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	14010053	14010917	chr18:14010053-14010917	3	+	14010053	14010053	8553170	1	864,	0,
#Deleted in new
chr18	14053950	14054761	chr18:14053950-14054761	7	+	14053950	14053950	16724991	1	811,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	14057456	14132490	chr18:14057456-14132490	0	-	14057456	14057456	8553170	5	59,198,99,200,216,	0,19872,20743,27420,74818,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	14071121	14132453	chr18:14071121-14132453	0	-	14071121	14071121	789624	6	6405,99,78,151,200,179,	0,7078,9067,13075,13755,61153,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	14074911	14075741	chr18:14074911-14075741	7	-	14074911	14074911	16724991	1	830,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	14075993	14132429	chr18:14075993-14132429	0	-	14085053	14132277	789624	5	1533,99,200,127,155,	0,2206,8883,48356,56281,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	14082166	14132428	chr18:14082166-14132428	0	-	14082166	14082166	8553170	4	741,16,200,154,	0,2165,2710,50108,
#Deleted in new
chr18	14089934	14091019	chr18:14089934-14091019	3	+	14089934	14089934	8553170	1	1085,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	14099937	14132428	chr18:14099937-14132428	1	-	14101660	14132277	789624	3	1836,127,154,	0,24412,32337,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	14099942	14106439	chr18:14099942-14106439	0	-	14099942	14099942	8553170	1	6497,	0,
#Partially deleted in new
chr18	14103862	14132430	chr18:14103862-14132430	3	-	14104916	14132277	789624	3	2547,127,156,	0,20487,28412,
#Deleted in new
chr18	14104541	14105226	chr18:14104541-14105226	3	+	14104541	14104541	8553170	2	324,193,	0,492,
#Partially deleted in new
chr18	14105993	14132457	chr18:14105993-14132457	0	-	14105993	14105993	8553170	2	416,183,	0,26281,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	14121792	14132429	chr18:14121792-14132429	0	-	14121792	14121792	8553170	3	379,127,155,	0,2557,10482,
#Partially deleted in new
chr18	14122162	14132438	chr18:14122162-14132438	0	-	14122162	14122162	8553170	4	441,94,127,164,	0,951,2187,10112,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	14124045	14132432	chr18:14124045-14132432	0	-	14124045	14124045	8553170	2	431,158,	0,8229,
#Deleted in new
chr18	14137709	14139272	chr18:14137709-14139272	7	+	14137709	14137709	16724991	1	1563,	0,
#Deleted in new
chr18	14143595	14151139	chr18:14143595-14151139	7	-	14143595	14143595	16724991	11	231,99,149,146,126,70,85,70,91,109,64,	0,991,1197,2477,2933,3330,3819,4368,5007,6386,7480,
#Partially deleted in new
chr18	14153000	14157342	chr18:14153000-14157342	7	-	14153000	14153000	16724991	4	82,71,121,174,	0,3283,3606,4168,
#Partially deleted in new
chr18	14179096	14185401	chr18:14179096-14185401	5	+	14179096	14179096	16724991	3	501,115,1473,	0,4555,4832,
#Partially deleted in new
chr18	14179142	14187774	chr18:14179142-14187774	4	+	14179142	14179142	16724991	3	455,174,551,	0,4786,8081,
#Partially deleted in new
chr18	14179369	14205212	chr18:14179369-14205212	4	+	14179369	14179369	16724991	4	228,115,174,65,	0,4282,4559,25778,
#Partially deleted in new
chr18	14179394	14244811	chr18:14179394-14244811	7	+	14179394	14179394	16724991	22	203,115,174,107,138,56,31,70,85,29,72,71,164,181,531,395,150,113,129,280,212,250,	0,4257,4534,8610,9781,12467,19064,21737,25753,28655,28776,34818,38960,40517,41869,46273,48216,53130,55292,62745,63617,65167,
#Deleted in new
chr18	14190699	14190806	chr18:14190699-14190806	3	+	14190699	14190699	8553170	1	107,	0,
#Partially deleted in new
chr18	14205164	14215544	chr18:14205164-14215544	4	+	14205164	14205164	16724991	6	68,29,72,108,71,84,	0,2885,3006,6144,9048,10296,
#Partially deleted in new
chr18	14211310	14219971	chr18:14211310-14219971	4	+	14211310	14211310	16724991	4	106,71,164,60,	0,2902,7044,8601,
#Deleted in new
chr18	14219913	14221384	chr18:14219913-14221384	4	+	14219913	14219913	16724991	2	179,121,	0,1350,
#Deleted in new
chr18	14222007	14222331	chr18:14222007-14222331	7	+	14222007	14222007	16724991	1	324,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr18	14225223	14342505	chr18:14225223-14342505	3	+	14225223	14225223	8553170	13	839,150,113,129,212,223,57,54,120,943,270,114,281,	0,2387,7301,9463,17788,19338,23743,24208,25064,113474,115158,116298,117001,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	14244624	14252140	chr18:14244624-14252140	5	+	14244624	14244624	16724991	5	160,57,54,120,175,	0,4342,4807,5663,7341,
#Deleted in new
chr18	14253547	14254075	chr18:14253547-14254075	7	+	14253547	14253547	16724991	1	528,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	14337422	14342524	chr18:14337422-14342524	7	+	14337422	14337422	16724991	4	1474,129,270,1003,	0,2089,2959,4099,
#Deleted in new
chr18	14338014	14338834	chr18:14338014-14338834	5	+	14338014	14338014	16724991	3	262,70,58,	0,507,762,
#Deleted in new
chr18	14346213	14346923	chr18:14346213-14346923	7	-	14346213	14346213	16724991	1	710,	0,
#Deleted in new
chr18	14361433	14361943	chr18:14361433-14361943	7	-	14361433	14361433	16724991	1	510,	0,
#Deleted in new
chr18	14377545	14378757	chr18:14377545-14378757	7	-	14377545	14377545	16724991	1	1212,	0,
#Deleted in new
chr18	14391912	14393909	chr18:14391912-14393909	7	-	14391912	14391912	16724991	1	1997,	0,
#Deleted in new
chr18	14450215	14450883	chr18:14450215-14450883	7	-	14450215	14450215	16724991	1	668,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	14477954	14499278	chr18:14477954-14499278	7	-	14477954	14477954	16724991	4	1439,56,134,326,	0,12570,20637,20998,
#Deleted in new
chr18	14478167	14479267	chr18:14478167-14479267	5	-	14478167	14478167	16724991	1	1100,	0,
#Deleted in new
chr18	14485805	14487501	chr18:14485805-14487501	7	+	14485805	14485805	16724991	2	559,673,	0,1023,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	14507338	14543585	chr18:14507338-14543585	0	-	14523478	14543146	789624	10	4655,124,167,45,71,138,107,174,115,960,	0,6323,14915,16124,23144,25722,27562,30462,30796,35287,
#Partially deleted in new
chr18	14511897	14543146	chr18:14511897-14543146	3	-	14511897	14543146	789624	11	96,124,167,45,71,71,138,107,174,115,521,	0,1764,10356,11565,13015,18585,21163,23003,25903,26237,30728,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	14527815	14543517	chr18:14527815-14543517	1	-	14529025	14543146	789624	8	270,221,71,138,107,174,115,892,	0,1009,2667,5245,7085,9985,10319,14810,
#Partially deleted in new
chr18	14528960	14543493	chr18:14528960-14543493	0	-	14528960	14528960	8553170	7	85,71,138,107,174,115,868,	0,1522,4100,5940,8840,9174,13665,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	14531675	14531782	chr18:14531675-14531782	3	-	14531675	14531675	8553170	1	107,	0,
#Deleted in new
chr18	14570843	14571788	chr18:14570843-14571788	7	+	14570843	14570843	16724991	1	945,	0,
#Deleted in new
chr18	14613136	14614184	chr18:14613136-14614184	7	+	14613136	14613136	16724991	1	1048,	0,
#Deleted in new
chr18	14629831	14632806	chr18:14629831-14632806	7	-	14629831	14629831	16724991	1	2975,	0,
#Deleted in new
chr18	14680603	14681106	chr18:14680603-14681106	7	-	14680603	14680603	16724991	1	503,	0,
#Partially deleted in new
chr18	14695421	14706597	chr18:14695421-14706597	7	+	14695421	14695421	16724991	5	94,142,142,184,22,	0,4602,10197,10794,11154,
#Partially deleted in new
chr18	14728271	14808731	chr18:14728271-14808731	0	+	14728271	14728271	8553170	5	243,29,73,29,60,	0,69389,69510,80279,80400,
#Partially deleted in new
chr18	14748239	14852480	chr18:14748239-14852480	3	+	14748419	14852480	789624	36	401,115,174,107,138,65,405,31,73,91,62,88,29,73,62,91,29,73,29,73,29,73,62,91,29,73,31,73,79,62,91,29,73,214,169,972,	0,4326,4599,6659,9575,12314,15446,21103,23916,29745,31720,34287,36096,36223,38799,43161,47981,48103,49421,49542,50861,50983,53977,55494,60311,74365,80038,83143,88971,89375,92348,94657,94784,100476,101974,103269,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr18	14748334	14817089	chr18:14748334-14817089	0	+	14748419	14796377	789624	30	306,115,174,107,138,65,405,31,73,91,62,88,29,73,62,91,73,29,73,29,73,62,91,29,73,29,73,62,91,732,	0,4231,4504,6564,9480,12219,15351,21008,23821,29650,31625,34192,36001,36128,38704,43066,48008,49326,49447,50766,50888,53882,55399,60216,60337,61651,61773,64769,66286,68023,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	14759187	14759294	chr18:14759187-14759294	3	+	14759187	14759187	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	14816150	14825249	chr18:14816150-14825249	3	-	14816150	14816150	8553170	2	487,99,	0,9000,
#Partially deleted in new
chr18	14830165	14830242	chr18:14830165-14830242	3	+	14830165	14830165	5263520	1	77,	0,
#Partially deleted in new
chr18	14837148	14852738	chr18:14837148-14852738	0	+	14837148	14837148	8553170	8	141,62,91,29,73,214,169,1230,	0,466,3439,5748,5875,11567,13065,14360,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	14877610	14884052	chr18:14877610-14884052	3	+	14877610	14877610	8553170	4	53,101,125,220,	0,220,5917,6222,
#Partially deleted in new
chr18	14888708	14890086	chr18:14888708-14890086	7	-	14888708	14888708	16724991	2	189,99,	0,1279,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	14946266	14973739	chr18:14946266-14973739	3	+	14946266	14946266	789624	4	62,214,194,1384,	0,15803,19350,26089,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	14952699	14974215	chr18:14952699-14974215	0	+	14952699	14952699	8553170	2	117,1865,	0,19651,
#Partially deleted in new
chr18	14969000	14969757	chr18:14969000-14969757	1	-	14969000	14969000	8553170	2	572,82,	0,675,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	14969605	14970468	chr18:14969605-14970468	3	-	14969605	14969605	789624	2	173,591,	0,272,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	14971496	14973770	chr18:14971496-14973770	0	+	14971496	14971496	8553170	2	390,1393,	0,881,
#Partially deleted in new
chr18	14978738	14979839	chr18:14978738-14979839	3	+	14978738	14978738	8553170	1	1101,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	14990706	14993235	chr18:14990706-14993235	3	-	14990706	14990706	8553170	1	2529,	0,
#Partially deleted in new
chr18	15003974	15006352	chr18:15003974-15006352	7	-	15003974	15003974	16724991	4	326,203,162,484,	0,426,1533,1894,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	15056844	15066598	chr18:15056844-15066598	3	-	15056844	15056844	8553170	2	537,70,	0,9684,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	15075444	15122767	chr18:15075444-15122767	3	+	15075444	15075444	8553170	3	113,60,294,	0,36618,47029,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	15159723	15164467	chr18:15159723-15164467	3	-	15159723	15159723	8553170	2	384,141,	0,4603,
#Deleted in new
chr18	15196998	15197729	chr18:15196998-15197729	7	-	15196998	15196998	16724991	2	230,185,	0,546,
#Deleted in new
chr18	15197538	15197775	chr18:15197538-15197775	5	-	15197538	15197538	16724991	1	237,	0,
#Partially deleted in new
chr18	15247428	15247997	chr18:15247428-15247997	7	-	15247428	15247428	16724991	1	569,	0,
#Partially deleted in new
chr18	15254417	15271744	chr18:15254417-15271744	7	+	15254417	15254417	16724991	3	127,75,1594,	0,643,15733,
#Partially deleted in new
chr18	15307662	15330282	chr18:15307662-15330282	7	-	15307662	15307662	16724991	8	309,79,76,139,107,174,120,177,	0,9012,11830,14490,15593,17894,18230,22443,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	15313555	15330263	chr18:15313555-15330263	4	-	15313555	15313555	16724991	7	561,1267,65,107,174,115,198,	0,1943,5948,9700,12001,12337,16510,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	15316484	15325919	chr18:15316484-15325919	4	-	15316484	15316484	16724991	5	281,65,107,70,27,	0,3019,6771,9176,9408,
#Partially deleted in new
chr18	15320839	15320944	chr18:15320839-15320944	3	-	15320839	15320839	8553170	1	105,	0,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr18	20946905	21111851	chr18:20946905-21111851	3	-	20951383	21110910	0	33	4482,208,262,79,89,71,160,189,89,94,166,95,70,185,161,151,107,247,92,136,49,89,61,160,92,139,145,85,176,138,101,82,1034,	0,6672,7877,8261,12934,13230,20011,20846,21866,22209,23442,33004,35857,37445,40044,44270,45925,59445,59793,61153,68525,73245,76714,81870,92566,95191,95659,97196,98386,102186,102874,123626,163912,
#Partially deleted in new
chr18	20949951	21111020	chr18:20949951-21111020	0	-	20960193	21110910	789624	34	1436,208,262,79,89,71,49,160,189,89,94,166,95,70,185,161,151,107,247,92,136,49,89,61,160,92,139,145,85,176,138,101,82,203,	0,3626,4831,5215,9888,10184,10711,16965,17800,18820,19163,20396,29958,32811,34399,36998,41224,42879,56399,56747,58107,65479,70199,73668,78824,89520,92145,92613,94150,95340,99140,99828,120580,160866,
#Partially deleted in new
chr18	20953289	20954870	chr18:20953289-20954870	0	-	20953573	20954870	789624	2	496,88,	0,1493,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	20954853	20955467	chr18:20954853-20955467	0	-	20954853	20954853	8553170	2	191,301,	0,313,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	20968484	20969354	chr18:20968484-20969354	0	-	20968484	20968484	8553170	2	376,240,	0,630,
#Partially deleted in new
chr18	20969957	20982783	chr18:20969957-20982783	0	-	20969957	20969957	8553170	3	556,95,21,	0,9952,12805,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	21045044	21049211	chr18:21045044-21049211	0	-	21045044	21045044	8553170	2	423,120,	0,4047,
#Deleted in new
chr18	21119181	21119661	chr18:21119181-21119661	7	-	21119181	21119181	16724991	1	480,	0,
#Deleted in new
chr18	21120403	21120506	chr18:21120403-21120506	3	-	21120403	21120403	8553170	1	103,	0,
#Partially deleted in new
chr18	21182502	21183499	chr18:21182502-21183499	7	-	21182502	21182502	16724991	1	997,	0,
#Deleted in new
chr18	21240674	21241371	chr18:21240674-21241371	3	-	21240674	21240674	8553170	2	333,95,	0,602,
#Partially deleted in new
chr18	21242241	21522830	chr18:21242241-21522830	3	+	21383518	21522821	789624	33	152,110,166,198,177,177,123,117,120,138,186,327,129,135,198,181,193,134,340,116,245,578,103,156,140,162,205,166,228,142,201,136,173,	0,123785,141268,141964,153143,158908,161630,197279,198027,199158,201982,207268,208781,209841,212124,230789,234922,243378,247770,253428,254212,257487,258298,263170,263568,265876,266145,271579,273175,274371,275792,278446,280416,
#Partially deleted in new
chr18	21242241	21455130	chr18:21242241-21455130	0	+	21242241	21242241	8553170	15	152,110,166,198,177,177,123,117,120,138,186,327,129,135,765,	0,123785,141268,141964,153143,158908,161630,197279,198027,199158,201982,207268,208781,209841,212124,
#Partially deleted in new
chr18	21242357	21522821	chr18:21242357-21522821	1	+	21383518	21522821	789624	32	36,110,166,198,177,177,123,117,120,138,186,129,135,198,181,193,134,340,116,245,578,103,156,140,162,205,166,228,142,201,136,164,	0,123669,141152,141848,153027,158792,161514,197163,197911,199042,201866,208665,209725,212008,230673,234806,243262,247654,253312,254096,257371,258182,263054,263452,265760,266029,271463,273059,274255,275676,278330,280300,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	21316877	21317795	chr18:21316877-21317795	3	+	21316877	21316877	8553170	2	27,334,	0,584,
#Partially deleted in new
chr18	21363592	21525417	chr18:21363592-21525417	1	+	21383518	21522821	789624	33	268,110,160,198,177,177,123,117,120,138,186,327,129,135,198,181,193,134,340,116,245,578,103,156,140,162,205,166,228,142,201,136,2760,	0,2434,19923,20613,31792,37557,40279,75928,76676,77807,80631,85917,87430,88490,90773,109438,113571,122027,126419,132077,132861,136136,136947,141819,142217,144525,144794,150228,151824,153020,154441,157095,159065,
#Partially deleted in new
chr18	21366040	21468884	chr18:21366040-21468884	0	+	21366040	21366040	8553170	15	96,166,198,177,177,123,117,120,138,186,327,129,135,198,159,	0,17469,18165,29344,35109,37831,73480,74228,75359,78183,83469,84982,86042,88325,102685,
#Partially deleted in new
chr18	21380285	21451017	chr18:21380285-21451017	3	-	21380285	21380285	8553170	4	390,75,79,135,	0,7227,21535,70597,
#Partially deleted in new
chr18	21401225	21441407	chr18:21401225-21441407	0	+	21401225	21441407	789624	6	101,123,129,117,120,8,	0,2646,33721,38295,39043,40174,
#Partially deleted in new
chr18	21449634	21452433	chr18:21449634-21452433	0	+	21449634	21452279	789624	3	202,129,351,	0,1388,2448,
#Deleted in new
chr18	21449740	21451370	chr18:21449740-21451370	0	+	21449740	21449740	8553170	2	96,348,	0,1282,
#Deleted in new
chr18	21450652	21450756	chr18:21450652-21450756	3	-	21450652	21450652	8553170	1	104,	0,
#Partially deleted in new
chr18	21451098	21508715	chr18:21451098-21508715	0	+	21451098	21451098	8553170	14	53,135,198,193,134,340,116,245,578,103,156,140,162,329,	0,984,3267,26065,34521,38913,44571,45355,48630,49441,54313,54711,57019,57288,
#Partially deleted in new
chr18	21485368	21490231	chr18:21485368-21490231	0	+	21485368	21485368	8553170	2	385,220,	0,4643,
#Partially deleted in new
chr18	21513902	21520739	chr18:21513902-21520739	0	+	21513902	21520739	789624	5	84,228,142,62,52,	0,1514,2710,4270,6785,
#Partially deleted in new
chr18	21529280	21600736	chr18:21529280-21600736	3	-	21530342	21574843	0	12	1210,188,144,90,132,115,61,115,2117,106,131,114,	0,3192,6761,10639,31578,34922,36865,38699,44033,46391,55029,71342,
#Partially deleted in new
chr18	21529302	21600884	chr18:21529302-21600884	0	-	21539980	21574843	0	13	1188,188,144,90,124,132,115,61,115,2117,106,131,262,	0,3170,6739,10617,11274,31556,34900,36843,38677,44011,46369,55007,71320,
#Partially deleted in new
chr18	21529309	21560981	chr18:21529309-21560981	1	-	21530342	21539958	789624	6	1181,188,144,90,124,123,	0,3163,6732,10610,11267,31549,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	21593042	21600704	chr18:21593042-21600704	0	-	21593042	21593042	8553170	3	446,47,82,	0,3910,7580,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	21612266	21633524	chr18:21612266-21633524	3	+	21612429	21629138	0	4	177,77,192,4463,	0,10458,11481,16795,
#Partially deleted in new
chr18	21612313	21629109	chr18:21612313-21629109	1	+	21612429	21623918	789624	4	130,77,65,48,	0,10411,11561,16748,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	21612330	21629479	chr18:21612330-21629479	1	+	21623788	21629138	789624	3	113,192,418,	0,11417,16731,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	21630137	21633524	chr18:21630137-21633524	0	+	21630137	21630137	8553170	2	348,397,	0,2990,
#Partially deleted in new
chr18	21650896	21704805	chr18:21650896-21704805	3	-	21651590	21704665	789624	9	867,166,49,174,113,46,183,164,302,	0,5964,6207,8273,13221,33023,51419,52687,53607,
#Partially deleted in new
chr18	21650927	21704767	chr18:21650927-21704767	1	-	21651590	21704665	789624	7	836,166,49,174,183,164,264,	0,5933,6176,8242,51388,52656,53576,
#Partially deleted in new
chr18	21651096	21703825	chr18:21651096-21703825	1	-	21651590	21663760	789624	8	667,166,49,174,553,46,183,242,	0,5764,6007,8073,12581,32823,51219,52487,
#Partially deleted in new
chr18	21651692	21664534	chr18:21651692-21664534	0	-	21651692	21651692	8553170	5	71,166,49,174,417,	0,5168,5411,7477,12425,
#Partially deleted in new
chr18	21654888	21656956	chr18:21654888-21656956	0	-	21655066	21656956	789624	2	195,96,	0,1972,
#Partially deleted in new
chr18	21659179	21704774	chr18:21659179-21704774	0	-	21702343	21704665	789624	6	164,553,46,183,94,271,	0,4498,24740,43136,44404,45324,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	21661786	21662395	chr18:21661786-21662395	3	-	21661786	21661786	8553170	2	292,44,	0,565,
#Partially deleted in new
chr18	21663849	21704640	chr18:21663849-21704640	0	-	21663849	21663849	8553170	4	381,183,164,137,	0,38466,39734,40654,
#Partially deleted in new
chr18	21682899	21703688	chr18:21682899-21703688	0	-	21683002	21703688	789624	4	106,46,183,105,	0,1020,19416,20684,
#Deleted in new
chr18	21683509	21683597	chr18:21683509-21683597	3	+	21683509	21683509	5263520	1	88,	0,
#Partially deleted in new
chr18	21683780	21704575	chr18:21683780-21704575	0	-	21683780	21683780	8553170	4	185,183,164,72,	0,18535,19803,20723,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	21701275	21704780	chr18:21701275-21704780	0	-	21701275	21701275	8553170	3	1223,164,277,	0,2308,3228,
#Partially deleted in new
chr18	21704956	21864974	chr18:21704956-21864974	0	+	21704956	21704956	8553170	21	167,172,130,105,67,205,223,145,134,108,198,152,133,87,162,182,193,79,114,101,449,	0,60815,63666,68667,73146,74524,86378,93127,94884,98950,110659,114538,133408,138174,139135,141987,144239,148183,152173,153589,159569,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	21711949	21712119	chr18:21711949-21712119	3	-	21711949	21711949	8553170	1	170,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	21724118	21724229	chr18:21724118-21724229	3	+	21724118	21724118	8553170	1	111,	0,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr18	21741319	21870957	chr18:21741319-21870957	3	+	21741583	21864666	0	21	493,172,130,105,67,205,184,145,134,108,198,152,133,87,162,182,193,79,114,101,6432,	0,24452,27303,32304,36783,38161,50054,56764,58521,62587,74296,78175,97045,101811,102772,105624,107876,111820,115810,117226,123206,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	21793882	21794159	chr18:21793882-21794159	3	+	21793882	21793882	8553170	1	277,	0,
#Partially deleted in new
chr18	21798083	21819558	chr18:21798083-21819558	0	+	21798083	21798083	8553170	6	145,134,108,77,198,64,	0,1757,5823,14308,17532,21411,
#Partially deleted in new
chr18	21803732	21819558	chr18:21803732-21819558	0	+	21803732	21803732	8553170	3	282,198,64,	0,11883,15762,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	21817623	21817828	chr18:21817623-21817828	3	+	21817623	21817623	8553170	1	205,	0,
#Deleted in new
chr18	21825486	21831406	chr18:21825486-21831406	1	-	21825486	21825486	789624	3	3966,175,85,	0,5133,5835,
#Deleted in new
chr18	21825697	21825785	chr18:21825697-21825785	3	-	21825697	21825697	5263520	1	88,	0,
#Deleted in new
chr18	21829003	21829088	chr18:21829003-21829088	3	-	21829003	21829003	5263520	1	85,	0,
#Deleted in new
chr18	21829086	21831410	chr18:21829086-21831410	0	-	21829086	21829086	8553170	3	366,121,89,	0,1533,2235,
#Deleted in new
chr18	21829432	21831398	chr18:21829432-21831398	2	-	21829432	21829432	8553170	3	20,175,223,	0,1187,1743,
#Partially deleted in new
chr18	21854639	21854987	chr18:21854639-21854987	7	-	21854639	21854639	16724991	1	348,	0,
#Partially deleted in new
chr18	21871445	21893996	chr18:21871445-21893996	3	-	21871445	21871445	8553170	2	280,137,	0,22414,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	21879800	21879904	chr18:21879800-21879904	3	+	21879800	21879800	8553170	1	104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	21914368	21914660	chr18:21914368-21914660	7	-	21914368	21914368	16724991	1	292,	0,
#Deleted in new
chr18	21928984	21929094	chr18:21928984-21929094	7	-	21928984	21928984	16724991	1	110,	0,
#Partially deleted in new
chr18	21981120	22051159	chr18:21981120-22051159	3	+	21981120	21981120	8553170	4	39,135,113,316,	0,62096,62619,69723,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	22010295	22043471	chr18:22010295-22043471	1	+	22010295	22010295	8553170	2	138,255,	0,32921,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	22026023	22043478	chr18:22026023-22043478	0	+	22026023	22026023	8553170	2	87,262,	0,17193,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	22088059	22098780	chr18:22088059-22098780	3	+	22088059	22088059	8553170	2	43,410,	0,10311,
#Deleted in new
chr18	22130602	22130729	chr18:22130602-22130729	3	-	22130602	22130602	8553170	1	127,	0,
#Deleted in new
chr18	22164885	22167781	chr18:22164885-22167781	0	-	22164885	22164885	8553170	2	532,178,	0,2718,
#Deleted in new
chr18	22165319	22165862	chr18:22165319-22165862	0	-	22165319	22165319	8553170	2	98,321,	0,222,
#Deleted in new
chr18	22166897	22168968	chr18:22166897-22168968	1	-	22166897	22166897	789624	2	1486,302,	0,1769,
#Deleted in new
chr18	22166915	22168437	chr18:22166915-22168437	1	-	22166915	22166915	8553170	4	393,200,119,127,	0,688,1128,1395,
#Deleted in new
chr18	22166978	22167942	chr18:22166978-22167942	0	-	22166978	22166978	8553170	2	330,339,	0,625,
#Deleted in new
chr18	22167288	22168445	chr18:22167288-22168445	1	-	22167288	22167288	8553170	4	20,200,77,135,	0,315,797,1022,
#Deleted in new
chr18	22167669	22168370	chr18:22167669-22168370	0	-	22167669	22167669	8553170	2	134,60,	0,641,
#Deleted in new
chr18	22167733	22169878	chr18:22167733-22169878	1	-	22167733	22167733	8553170	3	70,255,470,	0,933,1675,
#Deleted in new
chr18	22168228	22169452	chr18:22168228-22169452	2	-	22168228	22168228	8553170	2	28,44,	0,1180,
#Partially deleted in new
chr18	22169442	22202528	chr18:22169442-22202528	3	+	22171144	22200823	789624	7	240,1172,167,126,88,104,1873,	0,1665,7512,12010,13314,13497,31213,
#Partially deleted in new
chr18	22170932	22200880	chr18:22170932-22200880	1	+	22171144	22200823	789624	6	1347,167,126,88,104,225,	0,6022,10520,11824,12007,29723,
#Deleted in new
chr18	22175464	22176662	chr18:22175464-22176662	3	-	22175464	22175464	8553170	2	169,190,	0,1008,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	22180111	22180218	chr18:22180111-22180218	3	-	22180111	22180111	8553170	1	107,	0,
#Partially deleted in new
chr18	22200618	22205229	chr18:22200618-22205229	3	-	22200618	22200618	8553170	2	358,412,	0,4199,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	22213777	22228029	chr18:22213777-22228029	3	+	22213777	22213777	8553170	2	223,143,	0,14109,
#Deleted in new
chr18	22347845	22348252	chr18:22347845-22348252	3	-	22347845	22347845	8553170	1	407,	0,
#Deleted in new
chr18	22413600	22414867	chr18:22413600-22414867	1	-	22414629	22414854	789624	1	1267,	0,
#Deleted in new
chr18	22413602	22417915	chr18:22413602-22417915	3	-	22415573	22417811	789624	1	4313,	0,
#Deleted in new
chr18	22418828	22419294	chr18:22418828-22419294	7	-	22418828	22418828	16724991	1	466,	0,
#Deleted in new
chr18	22586464	22587227	chr18:22586464-22587227	7	+	22586464	22586464	16724991	1	763,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	22647581	22647688	chr18:22647581-22647688	3	+	22647581	22647581	8553170	1	107,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	22699480	22933764	chr18:22699480-22933764	3	-	22699480	22699480	8553170	4	183,100,110,177,	0,5340,221281,234107,
#Partially deleted in new
chr18	22723490	22778173	chr18:22723490-22778173	0	-	22723490	22723490	8553170	3	259,99,55,	0,31056,54628,
#Partially deleted in new
chr18	22723492	22786873	chr18:22723492-22786873	0	-	22723492	22723492	789624	2	257,124,	0,63257,
#Partially deleted in new
chr18	22723502	22731565	chr18:22723502-22731565	1	-	22723502	22723502	8553170	3	247,158,72,	0,7191,7991,
#Partially deleted in new
chr18	22784364	22907721	chr18:22784364-22907721	3	-	22784364	22784364	8553170	4	302,109,76,84,	0,2385,6759,123273,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	22798260	22936883	chr18:22798260-22936883	0	+	22936851	22936883	789624	5	227,86,66,55,130,	0,113339,117159,131122,138493,
#Deleted in new
chr18	22882824	22883357	chr18:22882824-22883357	3	-	22882824	22882824	8553170	1	533,	0,
#Deleted in new
chr18	22900485	22900995	chr18:22900485-22900995	7	-	22900485	22900485	16724991	1	510,	0,
#Partially deleted in new
chr18	22914120	22949658	chr18:22914120-22949658	0	+	22936851	22949658	789624	5	186,66,207,43,41,	0,1299,22633,32323,35497,
#Partially deleted in new
chr18	22914122	22936940	chr18:22914122-22936940	0	+	22936851	22936940	789624	5	184,66,86,55,187,	0,1297,2818,15260,22631,
#Partially deleted in new
chr18	22914122	22984897	chr18:22914122-22984897	0	+	22936851	22984897	789624	10	184,66,55,207,43,96,113,67,176,12,	0,1297,15260,22631,32321,35495,54683,61030,68095,70763,
#Partially deleted in new
chr18	22914138	22968810	chr18:22914138-22968810	0	+	22936851	22968810	789624	6	168,55,207,43,96,5,	0,15244,22615,32305,35479,54667,
#Partially deleted in new
chr18	22933314	23026486	chr18:22933314-23026486	3	+	22936851	23026240	0	19	250,207,43,96,113,67,176,105,98,113,892,127,89,115,144,70,97,142,344,	0,3439,13129,16303,35491,41838,48903,51571,55906,57622,59433,60406,63059,64305,68271,73048,83513,88814,92828,
#Deleted in new
chr18	22933348	22933438	chr18:22933348-22933438	3	+	22933348	22933348	5263520	1	90,	0,
#Partially deleted in new
chr18	22933825	23026488	chr18:22933825-23026488	1	+	22936851	23026240	0	19	253,207,43,96,113,67,176,105,98,113,892,127,89,115,144,70,97,142,346,	0,2928,12618,15792,34980,41327,48392,51060,55395,57111,58922,59895,62548,63794,67760,72537,83002,88303,92317,
#Partially deleted in new
chr18	22933840	23026486	chr18:22933840-23026486	1	+	22936851	23026247	0	18	319,207,43,96,113,67,176,105,98,113,892,127,89,115,144,70,142,344,	0,2913,12603,15777,34965,41312,48377,51045,55380,57096,58907,59880,62533,63779,67745,72522,88288,92302,
#Partially deleted in new
chr18	22933875	22993569	chr18:22933875-22993569	0	+	22936851	22993569	789624	11	389,207,43,96,113,67,176,105,98,113,822,	0,2878,12568,15742,34930,41277,48342,51010,55345,57061,58872,
#Partially deleted in new
chr18	22933880	22937118	chr18:22933880-22937118	0	+	22933880	22933880	8553170	3	279,207,59,	0,2873,3179,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr18	22934749	23026370	chr18:22934749-23026370	1	+	22936851	23026240	789624	19	25,207,43,96,113,67,176,105,98,113,892,127,89,115,159,70,97,142,228,	0,2004,11694,14868,34056,40403,47468,50136,54471,56187,57998,58971,61624,62870,66821,71613,82078,87379,91393,
#Partially deleted in new
chr18	22946338	22950035	chr18:22946338-22950035	0	+	22946338	22946338	8553170	2	148,418,	0,3279,
#Partially deleted in new
chr18	22968841	22990944	chr18:22968841-22990944	0	+	22968841	22990944	789624	6	77,67,176,105,47,8,	0,6311,13376,16044,20430,22095,
#Partially deleted in new
chr18	22975180	22991026	chr18:22975180-22991026	0	+	22975180	22977886	789624	6	39,98,176,105,98,90,	0,2609,7037,9705,14040,15756,
#Partially deleted in new
chr18	22993483	23026467	chr18:22993483-23026467	0	+	22993483	23026247	789624	8	156,127,89,115,144,97,142,325,	0,237,2890,4136,8102,23344,28645,32659,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	23004563	23004862	chr18:23004563-23004862	3	+	23004563	23004563	8553170	1	299,	0,
#Partially deleted in new
chr18	23016795	23026488	chr18:23016795-23026488	1	+	23022140	23026240	789624	3	129,142,346,	0,5333,9347,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	23024595	23024703	chr18:23024595-23024703	3	+	23024595	23024595	8553170	1	108,	0,
#Partially deleted in new
chr18	23134563	23257747	chr18:23134563-23257747	1	+	23194511	23257367	789624	10	107,72,93,78,97,157,104,107,208,521,	0,54274,59884,79413,100044,101331,102578,118396,119165,122663,
#Partially deleted in new
chr18	23134563	23258654	chr18:23134563-23258654	0	+	23194511	23252969	789624	7	88,72,93,78,107,208,1428,	0,54274,59884,79413,118396,119165,122663,
#Partially deleted in new
chr18	23135451	23194540	chr18:23135451-23194540	0	+	23194511	23194540	789624	4	94,84,72,93,	0,1072,53386,58996,
#Partially deleted in new
chr18	23135762	23260467	chr18:23135762-23260467	3	+	23135762	23257367	789624	10	845,72,93,78,97,157,104,107,208,3241,	0,53075,58685,78214,98845,100132,101379,117197,117966,121464,
#Partially deleted in new
chr18	23136423	23214231	chr18:23136423-23214231	0	+	23136423	23214118	789624	4	184,72,93,255,	0,52414,58024,77553,
#Partially deleted in new
chr18	23136458	23197053	chr18:23136458-23197053	0	+	23136458	23136458	8553170	4	149,72,93,205,	0,52379,57989,60390,
#Partially deleted in new
chr18	23136492	23190530	chr18:23136492-23190530	0	+	23136492	23136492	8553170	3	115,72,226,	0,52345,53812,
#Partially deleted in new
chr18	23136548	23189357	chr18:23136548-23189357	0	+	23136548	23136548	8553170	2	59,520,	0,52289,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	23149708	23258139	chr18:23149708-23258139	0	+	23149708	23149708	8553170	3	267,72,245,	0,39129,108186,
#Partially deleted in new
chr18	23155824	23258653	chr18:23155824-23258653	1	+	23155902	23257367	789624	10	128,72,93,78,97,157,104,107,208,1427,	0,33013,38623,58152,78783,80070,81317,97135,97904,101402,
#Partially deleted in new
chr18	23197143	23227008	chr18:23197143-23227008	0	-	23197143	23197143	8553170	2	649,34,	0,29831,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr18	23197754	23437932	chr18:23197754-23437932	0	-	23385033	23437852	789624	16	336,125,65,94,70,35,36,46,49,52,115,26,78,78,47,152,	0,21376,111925,154441,158839,167879,170960,172461,173667,175957,179072,179891,187235,223612,232876,240026,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	23204386	23331215	chr18:23204386-23331215	0	-	23204386	23204386	8553170	4	270,143,65,186,	0,10215,105293,126643,
#Deleted in new
chr18	23257163	23260354	chr18:23257163-23260354	3	-	23257163	23257163	8553170	2	269,120,	0,3071,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	23296012	23331259	chr18:23296012-23331259	0	-	23296012	23296012	8553170	3	2055,65,230,	0,13667,35017,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr18	23296016	23437905	chr18:23296016-23437905	3	-	23298006	23437852	789624	15	2051,65,94,70,35,36,46,49,52,26,78,82,78,47,125,	0,13663,56179,60577,69617,72698,74199,75405,77695,81629,88973,103549,125350,134614,141764,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr18	23296016	23437961	chr18:23296016-23437961	0	-	23370216	23437852	789624	14	2051,65,94,70,35,36,46,52,26,78,82,78,47,181,	0,13663,56179,60577,69617,72698,74199,77695,81629,88973,103549,125350,134614,141764,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr18	23296016	23437959	chr18:23296016-23437959	0	-	23376874	23437852	789624	11	2051,65,94,70,52,115,26,78,82,47,179,	0,13663,56179,60577,77695,80810,81629,88973,103549,134614,141764,
#Partially deleted in new
chr18	23297747	23370281	chr18:23297747-23370281	0	-	23297747	23297747	8553170	8	31,191,65,94,70,35,36,66,	0,129,11932,54448,58846,67886,70967,72468,
#Partially deleted in new
chr18	23297874	23331574	chr18:23297874-23331574	0	-	23297874	23297874	8553170	3	193,65,320,	0,11805,33380,
#Partially deleted in new
chr18	23297893	23437946	chr18:23297893-23437946	0	-	23385033	23437852	789624	12	174,65,94,70,35,36,46,52,26,78,47,166,	0,11786,54302,58700,67740,70821,72322,75818,79752,87096,132737,139887,
#Partially deleted in new
chr18	23298007	23437869	chr18:23298007-23437869	1	-	23376874	23437852	789624	16	60,65,94,70,35,36,46,49,52,115,26,78,82,78,47,89,	0,11672,54188,58586,67626,70707,72208,73414,75704,78819,79638,86982,101558,123359,132623,139773,
#Partially deleted in new
chr18	23352254	23437955	chr18:23352254-23437955	0	-	23352254	23437852	789624	10	35,70,49,52,26,78,82,78,47,175,	0,4339,19167,21457,25391,32735,47311,69112,78376,85526,
#Partially deleted in new
chr18	23352284	23437939	chr18:23352284-23437939	0	-	23385038	23437852	789624	11	5,70,35,36,46,52,26,78,82,78,159,	0,4309,13349,16430,17931,21427,25361,32705,47281,69082,85496,
#Partially deleted in new
chr18	23356593	23437932	chr18:23356593-23437932	0	-	23385033	23437852	789624	11	70,35,36,46,49,52,26,78,78,47,152,	0,9040,12121,13622,14828,17118,21052,28396,64773,74037,81187,
#Partially deleted in new
chr18	23356629	23437853	chr18:23356629-23437853	0	-	23385038	23437853	789624	11	34,35,36,49,52,26,78,82,78,47,73,	0,9004,12085,14792,17082,21016,28360,42936,64737,74001,81151,
#Partially deleted in new
chr18	23365634	23437913	chr18:23365634-23437913	0	-	23365634	23437852	789624	10	34,46,49,52,26,78,82,78,47,133,	0,4581,5787,8077,12011,19355,33931,55732,64996,72146,
#Partially deleted in new
chr18	23371447	23437932	chr18:23371447-23437932	0	-	23385033	23437852	789624	8	23,52,115,26,78,78,47,152,	0,2264,5379,6198,13542,49919,59183,66333,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr18	23452822	23483140	chr18:23452822-23483140	3	+	23453439	23481279	789624	13	680,116,146,108,110,144,128,198,160,81,90,108,1969,	0,10141,11144,11383,11696,13310,14576,20606,22125,24183,24356,26494,28349,
#Partially deleted in new
chr18	23453286	23481580	chr18:23453286-23481580	1	+	23453439	23481279	789624	13	216,116,98,108,110,144,128,198,160,81,90,108,409,	0,9677,10728,10919,11232,12846,14112,20142,21661,23719,23892,26030,27885,
#Partially deleted in new
chr18	23453286	23463319	chr18:23453286-23463319	0	+	23453286	23453286	8553170	2	216,356,	0,9677,
#Partially deleted in new
chr18	23453287	23464294	chr18:23453287-23464294	0	+	23453287	23453287	8553170	3	215,116,328,	0,9676,10679,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr18	23453291	23482528	chr18:23453291-23482528	0	+	23453291	23453291	8553170	12	211,116,146,108,110,144,128,198,160,263,108,1357,	0,9672,10675,10914,11227,12841,14107,20137,21656,23714,26025,27880,
#Partially deleted in new
chr18	23453307	23481500	chr18:23453307-23481500	1	+	23453439	23481279	789624	13	195,116,146,108,110,144,128,198,160,81,90,99,329,	0,9656,10659,10898,11211,12825,14091,20121,21640,23698,23871,26018,27864,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	23456370	23456467	chr18:23456370-23456467	3	+	23456370	23456370	8553170	1	97,	0,
#Partially deleted in new
chr18	23464555	23467577	chr18:23464555-23467577	0	+	23464555	23464555	8553170	3	73,144,179,	0,1577,2843,
#Partially deleted in new
chr18	23466134	23477203	chr18:23466134-23477203	0	+	23466134	23475028	789624	6	142,128,55,160,81,25,	0,1264,7294,8813,10871,11044,
#Partially deleted in new
chr18	23466168	23481365	chr18:23466168-23481365	0	+	23466168	23466168	8553170	6	108,55,160,263,108,194,	0,7260,8779,10837,13148,15003,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	23477187	23486603	chr18:23477187-23486603	0	+	23477187	23486188	789624	3	81,108,496,	0,2129,8920,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	23479006	23483137	chr18:23479006-23483137	0	+	23479006	23479006	8553170	2	418,1966,	0,2165,
#Deleted in new
chr18	23484999	23485197	chr18:23484999-23485197	7	+	23484999	23484999	16724991	1	198,	0,
#Partially deleted in new
chr18	23503469	23531807	chr18:23503469-23531807	1	+	23503618	23531684	789624	18	251,77,85,141,104,90,106,112,45,54,129,107,120,78,105,69,102,183,	0,901,3500,12386,12850,15420,15599,16732,20660,20959,23167,24325,25709,26165,26558,26759,27041,28155,
#Partially deleted in new
chr18	23503508	23531782	chr18:23503508-23531782	3	+	23503618	23531704	789624	20	212,77,85,57,87,141,104,90,106,112,45,54,129,107,120,78,105,69,226,158,	0,862,3461,4476,5684,12347,12811,15381,15560,16693,20621,20920,23128,24286,25670,26126,26519,26720,26878,28116,
#Partially deleted in new
chr18	23503512	23531778	chr18:23503512-23531778	0	+	23503618	23509214	789624	19	208,77,57,87,141,104,90,106,112,45,54,129,107,120,78,105,69,102,154,	0,858,4472,5680,12343,12807,15377,15556,16689,20617,20916,23124,24282,25666,26122,26515,26716,26998,28112,
#Deleted in new
chr18	23503518	23504722	chr18:23503518-23504722	0	+	23503518	23503518	8553170	2	202,352,	0,852,
#Partially deleted in new
chr18	23503518	23531776	chr18:23503518-23531776	1	+	23503618	23531704	789624	18	202,77,85,141,104,90,106,112,45,54,129,107,120,78,105,69,226,152,	0,852,3451,12337,12801,15371,15550,16683,20611,20910,23118,24276,25660,26116,26509,26710,26868,28106,
#Partially deleted in new
chr18	23503519	23515886	chr18:23503519-23515886	0	+	23503618	23509214	789624	7	201,77,85,57,122,87,31,	0,851,3450,4465,5135,5673,12336,
#Partially deleted in new
chr18	23503530	23519166	chr18:23503530-23519166	0	+	23503618	23509214	789624	7	190,77,87,141,104,90,98,	0,840,5662,12325,12789,15359,15538,
#Partially deleted in new
chr18	23503532	23531743	chr18:23503532-23531743	0	+	23503618	23524421	789624	20	188,77,85,57,87,141,104,90,106,112,29,73,129,107,120,78,105,69,226,119,	0,838,3437,4452,5660,12323,12787,15357,15536,16669,20597,20877,23104,24262,25646,26102,26495,26696,26854,28092,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	23506183	23535622	chr18:23506183-23535622	0	-	23506535	23535622	789624	4	459,163,114,154,	0,27171,28262,29285,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	23522314	23533517	chr18:23522314-23533517	0	-	23522889	23533517	789624	2	592,163,	0,11040,
#Partially deleted in new
chr18	23527873	23529482	chr18:23527873-23529482	0	+	23527873	23527873	8553170	2	28,304,	0,1305,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	23528206	23533440	chr18:23528206-23533440	0	-	23529686	23533440	789624	2	1521,86,	0,5148,
#Partially deleted in new
chr18	23529292	23535700	chr18:23529292-23535700	0	-	23529337	23535700	789624	4	62,163,114,232,	0,4062,5153,6176,
#Partially deleted in new
chr18	23529337	23531782	chr18:23529337-23531782	0	+	23529337	23529337	8553170	6	85,78,105,69,226,158,	0,297,690,891,1049,2287,
#Partially deleted in new
chr18	23529595	23531782	chr18:23529595-23531782	0	+	23529595	23529595	8553170	5	117,105,69,226,158,	0,432,633,791,2029,
#Deleted in new
chr18	23529964	23530536	chr18:23529964-23530536	0	+	23529964	23529964	8553170	3	168,69,150,	0,264,422,
#Partially deleted in new
chr18	23529965	23531779	chr18:23529965-23531779	0	+	23529965	23529965	8553170	3	167,384,155,	0,263,1659,
#Partially deleted in new
chr18	23531436	23586898	chr18:23531436-23586898	3	-	23532201	23586343	0	25	848,163,114,232,204,130,116,191,90,141,128,115,183,190,103,101,227,371,74,250,168,176,107,123,612,	0,1918,3009,4032,5236,7105,7918,8374,9011,9631,9869,12018,12907,13523,16569,20190,23321,24806,25680,28794,29923,37386,40637,42015,54850,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	23531721	23535700	chr18:23531721-23535700	0	-	23531721	23531721	8553170	3	563,1205,232,	0,1633,3747,
#Partially deleted in new
chr18	23531945	23560342	chr18:23531945-23560342	0	-	23532201	23560342	789624	18	339,163,114,232,204,130,116,191,90,141,128,115,183,190,227,422,74,112,	0,1409,2500,3523,4727,6596,7409,7865,8502,9122,9360,11509,12398,13014,22812,24297,25171,28285,
#Partially deleted in new
chr18	23533201	23534560	chr18:23533201-23534560	0	-	23533201	23533201	8553170	2	316,115,	0,1244,
#Partially deleted in new
chr18	23536699	23538925	chr18:23536699-23538925	0	-	23536699	23536699	8553170	2	177,384,	0,1842,
#Partially deleted in new
chr18	23536741	23539898	chr18:23536741-23539898	0	-	23536741	23536741	8553170	3	135,130,544,	0,1800,2613,
#Partially deleted in new
chr18	23539729	23586487	chr18:23539729-23586487	0	-	23539729	23539729	8553170	16	272,90,141,128,115,183,190,103,101,227,371,74,250,168,176,201,	0,718,1338,1576,3725,4614,5230,8276,11897,15028,16513,17387,20501,21630,29093,46557,
#Deleted in new
chr18	23539822	23541372	chr18:23539822-23541372	0	-	23539822	23539822	8553170	3	179,90,305,	0,625,1245,
#Partially deleted in new
chr18	23551545	23554985	chr18:23551545-23554985	0	-	23551545	23551545	8553170	2	182,228,	0,3212,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	23573451	23576947	chr18:23573451-23576947	0	-	23573451	23573451	8553170	2	123,467,	0,3029,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	23582015	23582121	chr18:23582015-23582121	3	-	23582015	23582015	8553170	1	106,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	23598925	23662885	chr18:23598925-23662885	3	-	23601225	23662730	789624	10	2384,99,96,99,99,99,99,99,111,176,	0,13166,18806,20605,30927,35125,39923,47263,50157,63784,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	23600009	23647997	chr18:23600009-23647997	0	-	23600009	23600009	8553170	7	1300,99,96,99,95,99,1809,	0,12082,17722,19521,29847,34041,46179,
#Partially deleted in new
chr18	23600459	23662815	chr18:23600459-23662815	1	-	23601225	23662730	789624	9	850,96,99,99,99,99,99,111,106,	0,17272,19071,29393,33591,38389,45729,48623,62250,
#Partially deleted in new
chr18	23601276	23619824	chr18:23601276-23619824	0	-	23601276	23601276	8553170	3	33,96,430,	0,16455,18118,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	23618540	23619723	chr18:23618540-23619723	0	-	23618540	23618540	8553170	2	248,329,	0,854,
#Partially deleted in new
chr18	23629851	23662883	chr18:23629851-23662883	0	-	23629851	23662730	789624	5	100,99,99,111,174,	0,4199,16337,19231,32858,
#Partially deleted in new
chr18	23648410	23662772	chr18:23648410-23662772	1	-	23648881	23662730	789624	2	783,63,	0,14299,
#Partially deleted in new
chr18	23672252	23672748	chr18:23672252-23672748	7	-	23672252	23672252	16724991	1	496,	0,
#Partially deleted in new
chr18	23689442	23955066	chr18:23689442-23955066	3	+	23689683	23954648	789624	75	535,153,118,119,171,92,116,119,91,132,63,135,138,47,100,53,106,100,157,124,143,98,154,161,109,98,145,127,140,116,212,205,145,141,162,99,84,231,114,110,81,107,51,152,111,112,168,197,117,155,142,103,117,180,143,171,152,163,134,145,120,134,118,141,140,132,154,164,184,141,160,131,94,120,564,	0,24477,58500,59985,61475,64278,68953,73962,84054,86349,88114,94580,120923,123614,124960,125745,126025,126945,130398,132809,134980,137259,137871,144385,147538,149338,150342,152952,153168,155566,156854,158021,168401,169246,172203,175342,178391,181988,186851,192493,195330,200568,204855,205464,209295,209511,209845,211684,213566,214490,215110,216079,218107,218313,219710,223268,224967,225255,225846,227108,231492,232009,238680,239182,241619,242717,244339,249780,254345,256701,260322,260586,262241,263547,265060,
#Partially deleted in new
chr18	23689683	23954648	chr18:23689683-23954648	1	+	23689683	23954648	789624	74	294,153,118,119,171,92,116,119,91,132,63,135,138,47,100,53,106,100,157,124,143,98,154,161,109,98,145,127,140,116,212,205,145,141,162,99,84,231,114,110,81,107,51,152,111,112,197,117,155,142,103,117,180,143,171,152,163,134,145,120,134,118,141,140,132,154,164,184,141,160,131,94,120,146,	0,24236,58259,59744,61234,64037,68712,73721,83813,86108,87873,94339,120682,123373,124719,125504,125784,126704,130157,132568,134739,137018,137630,144144,147297,149097,150101,152711,152927,155325,156613,157780,168160,169005,171962,175101,178150,181747,186610,192252,195089,200327,204614,205223,209054,209270,211443,213325,214249,214869,215838,217866,218072,219469,223027,224726,225014,225605,226867,231251,231768,238439,238941,241378,242476,244098,249539,254104,256460,260081,260345,262000,263306,264819,
#Deleted in new
chr18	23709824	23710287	chr18:23709824-23710287	7	-	23709824	23709824	16724991	1	463,	0,
#Partially deleted in new
chr18	23827403	23837312	chr18:23827403-23837312	0	+	23827403	23827403	8553170	3	64,161,332,	0,6424,9577,
#Deleted in new
chr18	23833952	23834837	chr18:23833952-23834837	0	+	23833952	23834425	789624	2	36,554,	0,331,
#Boundary problem: need 48, got 0, diff 48, mapped 0.0
chr18	23838795	23956222	chr18:23838795-23956222	0	+	23838795	23954648	8553170	48	83,145,127,140,116,212,205,145,141,162,99,84,231,114,110,81,107,51,152,111,112,168,197,117,155,142,103,143,171,152,163,134,145,120,134,118,141,140,132,154,164,184,141,160,131,94,120,1720,	0,989,3599,3815,6213,7501,8668,19048,19893,22850,25989,29038,32635,37498,43140,45977,51215,55502,56111,59942,60158,60492,62331,64213,65137,65757,66726,70357,73915,75614,75902,76493,77755,82139,82656,89327,89829,92266,93364,94986,100427,104992,107348,110969,111233,112888,114194,115707,
#Partially deleted in new
chr18	23872839	23954939	chr18:23872839-23954939	1	+	23873044	23954648	789624	38	376,114,110,81,107,51,152,111,112,168,197,117,155,142,103,117,180,143,171,152,163,134,145,120,134,118,141,140,132,154,164,184,141,160,131,94,120,437,	0,3454,9096,11933,17171,21458,22067,25898,26114,26448,28287,30169,31093,31713,32682,34710,34916,36313,39871,41570,41858,42449,43711,48095,48612,55283,55785,58222,59320,60942,66383,70948,73304,76925,77189,78844,80150,81663,
#Partially deleted in new
chr18	23873044	23954648	chr18:23873044-23954648	1	+	23873044	23954648	789624	37	171,114,110,81,107,51,152,111,112,197,117,155,142,103,117,180,143,171,152,163,134,145,120,134,118,141,140,132,154,164,184,141,160,131,94,120,146,	0,3249,8891,11728,16966,21253,21862,25693,25909,28082,29964,30888,31508,32477,34505,34711,36108,39666,41365,41653,42244,43506,47890,48407,55078,55580,58017,59115,60737,66178,70743,73099,76720,76984,78639,79945,81458,
#Partially deleted in new
chr18	23884772	23931559	chr18:23884772-23931559	0	+	23884772	23931507	789624	26	81,107,51,152,111,112,168,197,117,155,142,103,117,180,143,171,152,163,134,145,120,134,118,141,140,140,	0,5238,9525,10134,13965,14181,14515,16354,18236,19160,19780,20749,22777,22983,24380,27938,29637,29925,30516,31778,36162,36679,43350,43852,46289,46647,
#Partially deleted in new
chr18	23898260	23954989	chr18:23898260-23954989	0	+	23898260	23898260	8553170	32	191,111,112,168,197,117,155,142,103,117,180,143,171,152,163,134,145,120,134,118,141,140,132,154,164,184,141,160,131,94,120,487,	0,477,693,1027,2866,4748,5672,6292,7261,9289,9495,10892,14450,16149,16437,17028,18290,22674,23191,29862,30364,32801,33899,35521,40962,45527,47883,51504,51768,53423,54729,56242,
#Deleted in new
chr18	23898736	23899700	chr18:23898736-23899700	0	+	23898736	23898736	8553170	3	112,112,413,	0,217,551,
#Partially deleted in new
chr18	23928624	23931691	chr18:23928624-23931691	0	+	23928624	23931205	789624	2	141,630,	0,2437,
#Deleted in new
chr18	23931154	23932585	chr18:23931154-23932585	0	+	23931154	23931154	8553170	2	47,426,	0,1005,
#Deleted in new
chr18	23946183	23946837	chr18:23946183-23946837	0	+	23946183	23946487	789624	2	101,361,	0,293,
#Partially deleted in new
chr18	23949892	23954799	chr18:23949892-23954799	0	+	23949892	23954648	789624	4	32,131,94,297,	0,136,1791,4610,
#Partially deleted in new
chr18	23957753	23982556	chr18:23957753-23982556	3	-	23957753	23957753	8553170	2	878,183,	0,24620,
#Partially deleted in new
chr18	23992772	24133027	chr18:23992772-24133027	3	+	24064155	24132574	789624	14	266,49,129,115,355,169,94,108,110,124,98,105,39,543,	0,71367,73239,76384,87812,90140,121781,125352,131061,132654,136113,137540,139109,139712,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	23994212	24015339	chr18:23994212-24015339	3	-	23994212	23994212	789624	6	267,174,95,120,125,36,	0,6176,7352,12154,18704,21091,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	24014419	24020288	chr18:24014419-24020288	1	+	24014871	24019923	789624	2	619,429,	0,5440,
#Partially deleted in new
chr18	24014635	24133028	chr18:24014635-24133028	1	+	24014871	24132574	789624	14	403,49,129,115,355,169,94,108,110,124,98,105,39,544,	0,49504,51376,54521,65949,68277,99918,103489,109198,110791,114250,115677,117246,117849,
#Partially deleted in new
chr18	24014912	24080779	chr18:24014912-24080779	0	+	24014912	24014912	8553170	4	126,49,129,195,	0,49227,51099,65672,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	24016633	24020285	chr18:24016633-24020285	1	+	24016672	24019923	789624	2	107,426,	0,3226,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	24076793	24099320	chr18:24076793-24099320	3	-	24076793	24076793	8553170	2	466,98,	0,22429,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	24113352	24135610	chr18:24113352-24135610	1	+	24113602	24132574	789624	9	313,94,108,110,124,98,105,39,3126,	0,1201,4772,10481,12074,15533,16960,18529,19132,
#Partially deleted in new
chr18	24113636	24121003	chr18:24113636-24121003	3	-	24113636	24113636	8553170	2	495,12,	0,7355,
#Partially deleted in new
chr18	24114272	24123937	chr18:24114272-24123937	0	+	24118135	24123937	789624	4	83,94,108,104,	0,281,3852,9561,
#Deleted in new
chr18	24114339	24115032	chr18:24114339-24115032	0	+	24114339	24114339	8553170	2	31,479,	0,214,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	24123595	24132509	chr18:24123595-24132509	0	+	24123595	24123595	8553170	6	348,124,98,105,39,25,	0,1831,5290,6717,8286,8889,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	24123626	24125662	chr18:24123626-24125662	0	+	24123626	24123626	8553170	2	317,236,	0,1800,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	24124169	24124285	chr18:24124169-24124285	3	-	24124169	24124169	8553170	1	116,	0,
#Deleted in new
chr18	24135467	24135829	chr18:24135467-24135829	3	-	24135467	24135467	8553170	1	362,	0,
#Partially deleted in new
chr18	24138955	24161603	chr18:24138955-24161603	1	+	24143114	24161516	789624	6	163,169,54,342,598,88,	0,4135,4404,16745,20516,22560,
#Partially deleted in new
chr18	24138986	24159662	chr18:24138986-24159662	1	+	24155795	24156983	789624	3	132,1299,191,	0,16714,20485,
#Partially deleted in new
chr18	24139016	24161599	chr18:24139016-24161599	1	+	24143114	24156983	789624	5	102,169,1299,598,84,	0,4074,16684,20455,22499,
#Partially deleted in new
chr18	24139031	24161597	chr18:24139031-24161597	1	+	24155795	24161516	789624	4	87,342,598,82,	0,16669,20440,22484,
#Partially deleted in new
chr18	24139057	24161600	chr18:24139057-24161600	3	+	24143114	24156983	789624	6	61,169,54,1299,124,85,	0,4033,4302,16643,20888,22458,
#Partially deleted in new
chr18	24139061	24161600	chr18:24139061-24161600	1	+	24143114	24156983	789624	5	57,169,54,1299,85,	0,4029,4298,16639,22454,
#Partially deleted in new
chr18	24139061	24152726	chr18:24139061-24152726	0	+	24143114	24150560	789624	5	57,169,54,94,69,	0,4029,4298,11476,13596,
#Partially deleted in new
chr18	24139061	24156197	chr18:24139061-24156197	0	+	24143114	24150560	789624	5	57,169,54,94,497,	0,4029,4298,11476,16639,
#Partially deleted in new
chr18	24139061	24155868	chr18:24139061-24155868	0	+	24143114	24150560	789624	5	57,169,54,87,168,	0,4029,4298,11476,16639,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	24139061	24155934	chr18:24139061-24155934	0	+	24155795	24155934	789624	3	57,317,231,	0,889,16642,
#Partially deleted in new
chr18	24139067	24161599	chr18:24139067-24161599	1	+	24143114	24161516	789624	6	51,169,54,342,124,84,	0,4023,4292,16633,20878,22448,
#Partially deleted in new
chr18	24139094	24161597	chr18:24139094-24161597	1	+	24143114	24156983	789624	6	24,169,54,1299,598,82,	0,3996,4265,16606,20377,22421,
#Partially deleted in new
chr18	24139096	24159572	chr18:24139096-24159572	0	+	24143114	24159572	789624	4	22,169,342,101,	0,3994,16604,20375,
#Partially deleted in new
chr18	24139483	24161588	chr18:24139483-24161588	1	+	24143114	24161516	789624	6	36,169,54,342,598,73,	0,3607,3876,16217,19988,22032,
#Partially deleted in new
chr18	24139624	24155754	chr18:24139624-24155754	0	+	24143114	24155754	789624	4	174,169,54,54,	0,3466,3735,16076,
#Partially deleted in new
chr18	24152643	24155939	chr18:24152643-24155939	0	+	24152643	24152643	8553170	2	179,239,	0,3057,
#Partially deleted in new
chr18	24156103	24161582	chr18:24156103-24161582	0	+	24156103	24156983	789624	3	896,127,67,	0,3839,5412,
#Deleted in new
chr18	24159508	24162211	chr18:24159508-24162211	3	-	24159508	24159508	8553170	3	320,100,315,	0,1269,2388,
#Deleted in new
chr18	24159815	24160265	chr18:24159815-24160265	0	+	24159815	24159815	8553170	1	450,	0,
#Partially deleted in new
chr18	24162043	24397859	chr18:24162043-24397859	3	-	24163178	24377533	789624	28	1238,91,124,117,127,90,108,183,98,135,76,157,163,107,82,123,99,64,74,45,62,145,86,112,75,86,123,205,	0,3021,4535,5285,8283,9365,10332,15969,17694,19101,34081,62998,77176,118798,141593,149940,152205,155105,155283,156557,156704,170898,172201,179503,204848,206243,215369,235611,
#Partially deleted in new
chr18	24162044	24272232	chr18:24162044-24272232	1	-	24163178	24225103	789624	14	1237,91,124,117,127,90,108,183,98,135,76,157,163,611,	0,3020,4534,5284,8282,9364,10331,15968,17693,19100,34080,62997,77175,109577,
#Partially deleted in new
chr18	24163133	24311516	chr18:24163133-24311516	1	-	24163178	24303664	789624	16	148,91,124,117,127,90,108,183,98,135,76,157,163,107,82,63,	0,1931,3445,4195,7193,8275,9242,14879,16604,18011,32991,61908,76086,117708,140503,148320,
#Partially deleted in new
chr18	24163156	24179835	chr18:24163156-24179835	0	-	24163178	24179835	789624	8	125,91,124,117,127,90,108,98,	0,1908,3422,4172,7170,8252,9219,16581,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	24170504	24170623	chr18:24170504-24170623	7	-	24170504	24170504	16724991	1	119,	0,
#Partially deleted in new
chr18	24171479	24271685	chr18:24171479-24271685	0	-	24172474	24225103	789624	6	19,108,76,157,163,64,	0,896,24645,53562,67740,100142,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	24179037	24179295	chr18:24179037-24179295	3	-	24179037	24179037	8553170	1	258,	0,
#Deleted in new
chr18	24195959	24196202	chr18:24195959-24196202	1	-	24195959	24196202	789624	2	6,78,	0,165,
#Partially deleted in new
chr18	24196034	24271611	chr18:24196034-24271611	0	-	24196034	24196034	8553170	4	166,157,163,94,	0,29007,43185,75483,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	24218299	24218404	chr18:24218299-24218404	3	+	24218299	24218299	8553170	1	105,	0,
#Partially deleted in new
chr18	24225066	24311522	chr18:24225066-24311522	0	-	24280882	24303664	789624	6	132,163,107,32,82,69,	0,14153,55775,76226,78570,86387,
#Partially deleted in new
chr18	24280841	24397880	chr18:24280841-24397880	0	-	24341629	24377533	789624	14	107,82,123,99,64,74,45,62,145,86,112,6,123,226,	0,22795,31142,33407,36307,36485,37759,37906,52100,53403,60705,87525,96571,116813,
#Partially deleted in new
chr18	24280841	24397823	chr18:24280841-24397823	0	-	24341629	24377533	789624	13	107,82,123,99,64,74,45,62,145,86,112,123,169,	0,22795,31142,33407,36307,36485,37759,37906,52100,53403,60705,96571,116813,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	24280841	24311532	chr18:24280841-24311532	0	-	24280841	24280841	8553170	4	107,363,82,79,	0,21547,22795,30612,
#Partially deleted in new
chr18	24318755	24397855	chr18:24318755-24397855	0	-	24366937	24377533	789624	7	54,145,86,75,6,123,201,	0,14186,15489,48136,49611,58657,78899,
#Partially deleted in new
chr18	24321685	24321735	chr18:24321685-24321735	3	+	24321685	24321685	5263520	1	50,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	24357124	24397788	chr18:24357124-24397788	1	-	24358490	24377533	789624	5	1387,75,86,123,216,	0,9767,11162,20288,40448,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	24364786	24367984	chr18:24364786-24367984	3	+	24364786	24364786	8553170	2	85,482,	0,2716,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	24366404	24397841	chr18:24366404-24397841	0	-	24366404	24366404	8553170	5	562,86,44,123,187,	0,1882,2141,11008,31250,
#Partially deleted in new
chr18	24367933	24377538	chr18:24367933-24377538	0	-	24367933	24367933	8553170	2	439,126,	0,9479,
#Deleted in new
chr18	24402152	24402714	chr18:24402152-24402714	3	+	24402152	24402152	8553170	1	562,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr18	24426615	24453535	chr18:24426615-24453535	3	+	24426756	24450847	789624	11	177,129,53,63,86,123,104,74,91,135,2757,	0,1303,2253,3706,11339,13880,16433,18777,21477,23203,24163,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr18	24426633	24453510	chr18:24426633-24453510	1	+	24426756	24451429	8553170	12	159,129,53,63,86,123,104,74,91,135,36,2150,	0,1285,2235,3688,11321,13862,16415,18759,21459,23185,24145,24727,
#Partially deleted in new
chr18	24426646	24451596	chr18:24426646-24451596	0	+	24426646	24426646	8553170	10	1401,53,63,86,123,104,74,91,135,818,	0,2222,3675,11308,13849,16402,18746,21446,23172,24132,
#Partially deleted in new
chr18	24426698	24443152	chr18:24426698-24443152	0	+	24427936	24443152	789624	7	45,129,53,63,86,123,104,	0,1220,2170,3623,11256,13797,16350,
#Partially deleted in new
chr18	24426741	24443119	chr18:24426741-24443119	0	+	24426756	24443119	789624	7	51,129,53,63,86,123,65,	0,1177,2127,3580,11213,13754,16313,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	24429504	24429609	chr18:24429504-24429609	3	+	24429504	24429504	8553170	1	105,	0,
#Partially deleted in new
chr18	24448138	24453531	chr18:24448138-24453531	0	+	24448138	24453254	789624	4	45,135,36,382,	0,1680,2640,5011,
#Partially deleted in new
chr18	24450792	24453529	chr18:24450792-24453529	0	+	24450792	24450847	789624	3	75,65,380,	0,568,2357,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	24460628	24479957	chr18:24460628-24479957	3	+	24460728	24477562	789624	3	293,164,3211,	0,8159,16118,
#Partially deleted in new
chr18	24460728	24477562	chr18:24460728-24477562	1	+	24460728	24477562	789624	2	193,716,	0,16118,
#Partially deleted in new
chr18	24489374	24491080	chr18:24489374-24491080	3	+	24489374	24489374	8553170	2	28,431,	0,1275,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	24516698	24542023	chr18:24516698-24542023	3	-	24516698	24516698	8553170	3	682,127,1310,	0,1263,24015,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	24522272	24522919	chr18:24522272-24522919	7	-	24522272	24522272	16724991	1	647,	0,
#Partially deleted in new
chr18	24628181	24662198	chr18:24628181-24662198	1	+	24628181	24628181	789624	3	82,360,1879,	0,31553,32138,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	24628232	24708542	chr18:24628232-24708542	3	+	24628232	24628232	8553170	6	31,185,107,111,74,2899,	0,46042,64331,66023,66693,77411,
#Deleted in new
chr18	24656992	24660405	chr18:24656992-24660405	0	+	24656992	24656992	8553170	3	150,360,86,	0,2742,3327,
#Deleted in new
chr18	24673162	24674348	chr18:24673162-24674348	0	+	24673162	24673162	8553170	2	503,74,	0,1112,
#Deleted in new
chr18	24685771	24686351	chr18:24685771-24686351	7	-	24685771	24685771	16724991	1	580,	0,
#Deleted in new
chr18	24689913	24690161	chr18:24689913-24690161	7	-	24689913	24689913	16724991	1	248,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	24725780	24766645	chr18:24725780-24766645	1	+	24725780	24725780	789624	3	224,83,165,	0,894,40700,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	24725852	24929076	chr18:24725852-24929076	3	+	24725852	24725852	8553170	4	152,83,176,181,	0,822,201985,203043,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	24725943	24744878	chr18:24725943-24744878	0	+	24725943	24725943	8553170	3	61,83,79,	0,731,18856,
#Partially deleted in new
chr18	24933486	24987682	chr18:24933486-24987682	3	-	24933486	24933486	8553170	2	161,326,	0,53870,
#Partially deleted in new
chr18	24954206	24987665	chr18:24954206-24987665	0	-	24954206	24954206	8553170	2	77,309,	0,33150,
#Deleted in new
chr18	25016433	25017204	chr18:25016433-25017204	7	-	25016433	25016433	16724991	1	771,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	25055599	25056760	chr18:25055599-25056760	3	+	25055599	25055599	8553170	2	292,371,	0,790,
#Partially deleted in new
chr18	25061925	25352152	chr18:25061925-25352152	3	-	25062711	25350946	789624	8	816,116,132,85,3353,180,41,148,	0,27539,30024,133234,162419,260082,288981,290079,
#Partially deleted in new
chr18	25062424	25352148	chr18:25062424-25352148	1	-	25062711	25227257	789624	7	317,116,132,85,3353,180,144,	0,27040,29525,132735,161920,259583,289580,
#Partially deleted in new
chr18	25062450	25352071	chr18:25062450-25352071	0	-	25195162	25350946	789624	9	291,116,132,85,80,3353,180,41,67,	0,27014,29499,132709,161585,161894,259557,288456,289554,
#Partially deleted in new
chr18	25062592	25352155	chr18:25062592-25352155	1	-	25062711	25350946	789624	8	149,116,132,85,3353,180,87,151,	0,26872,29357,132567,161752,259415,288314,289412,
#Partially deleted in new
chr18	25136717	25224789	chr18:25136717-25224789	0	-	25136717	25224789	789624	3	22,85,445,	0,58442,87627,
#Partially deleted in new
chr18	25196662	25218241	chr18:25196662-25218241	3	+	25196662	25196662	8553170	5	90,774,55,59,1059,	0,10539,16948,17376,20520,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	25200975	25202837	chr18:25200975-25202837	3	-	25200975	25200975	8553170	1	1862,	0,
#Deleted in new
chr18	25227202	25231530	chr18:25227202-25231530	0	-	25227202	25227202	8553170	2	495,60,	0,4268,
#Partially deleted in new
chr18	25227243	25351747	chr18:25227243-25351747	0	-	25227243	25350946	789624	4	454,180,41,19,	0,94764,123663,124485,
#Partially deleted in new
chr18	25227387	25302034	chr18:25227387-25302034	0	-	25227387	25227387	8553170	3	310,126,95,	0,46082,74552,
#Partially deleted in new
chr18	25227485	25351615	chr18:25227485-25351615	0	-	25227485	25350946	789624	4	212,180,41,114,	0,94522,123421,124016,
#Partially deleted in new
chr18	25227586	25352170	chr18:25227586-25352170	0	-	25227586	25227586	8553170	5	111,180,43,41,166,	0,94421,99819,123320,124418,
#Partially deleted in new
chr18	25227606	25352190	chr18:25227606-25352190	0	-	25227606	25227606	8553170	5	91,180,96,41,186,	0,94401,117645,123300,124398,
#Partially deleted in new
chr18	25227619	25322335	chr18:25227619-25322335	0	-	25227619	25227619	8553170	2	78,328,	0,94388,
#Deleted in new
chr18	25302125	25302960	chr18:25302125-25302960	3	+	25302125	25302125	8553170	2	173,295,	0,540,
#Partially deleted in new
chr18	25315523	25352149	chr18:25315523-25352149	0	-	25315523	25315523	8553170	3	265,180,145,	0,6484,36481,
#Partially deleted in new
chr18	25322136	25351193	chr18:25322136-25351193	0	-	25322136	25350946	789624	2	51,287,	0,28770,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	25818233	25818532	chr18:25818233-25818532	3	-	25818233	25818233	8553170	1	299,	0,
#Partially deleted in new
chr18	25953215	25953468	chr18:25953215-25953468	7	-	25953215	25953215	16724991	1	253,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr18	26016252	26090625	chr18:26016252-26090625	3	-	26018353	26090569	789624	11	2128,134,123,93,105,168,222,154,85,77,125,	0,16146,18752,19578,22302,23036,36371,41336,61823,71248,74248,
#Partially deleted in new
chr18	26017342	26091217	chr18:26017342-26091217	1	-	26018353	26087577	789624	11	1038,134,123,93,105,168,222,154,85,77,122,	0,15056,17662,18488,21212,21946,35281,40246,60733,70158,73753,
#Partially deleted in new
chr18	26017884	26090610	chr18:26017884-26090610	0	-	26082497	26090569	789624	11	496,134,123,105,168,222,154,85,166,77,110,	0,14514,17120,20670,21404,34739,39704,60191,64478,69616,72616,
#Partially deleted in new
chr18	26018006	26090598	chr18:26018006-26090598	0	-	26057702	26090569	789624	10	374,134,123,93,105,168,222,154,77,98,	0,14392,16998,17824,20548,21282,34617,39582,69494,72494,
#Partially deleted in new
chr18	26018013	26090901	chr18:26018013-26090901	1	-	26018353	26090569	789624	10	367,134,123,105,168,222,154,85,77,401,	0,14385,16991,20541,21275,34610,39575,60062,69487,72487,
#Partially deleted in new
chr18	26018119	26090597	chr18:26018119-26090597	0	-	26080314	26090569	789624	11	261,134,123,105,168,222,154,85,119,77,97,	0,14279,16885,20435,21169,34504,39469,59956,62185,69381,72381,
#Partially deleted in new
chr18	26018349	26035614	chr18:26018349-26035614	0	-	26018349	26018349	8553170	3	31,134,610,	0,14049,16655,
#Partially deleted in new
chr18	26023612	26035065	chr18:26023612-26035065	0	-	26023612	26023612	8553170	3	20,134,61,	0,8786,11392,
#Partially deleted in new
chr18	26035090	26090613	chr18:26035090-26090613	0	-	26078103	26090569	789624	8	37,93,105,168,222,154,85,113,	0,740,3464,4198,17533,22498,42985,55410,
#Partially deleted in new
chr18	26039409	26090625	chr18:26039409-26090625	0	-	26039409	26039409	8553170	7	47,222,154,64,85,77,125,	0,13214,18179,29084,38666,48091,51091,
#Partially deleted in new
chr18	26052681	26090652	chr18:26052681-26090652	0	-	26084138	26090569	789624	6	164,154,85,124,77,152,	0,4907,25394,31370,34819,37819,
#Partially deleted in new
chr18	26052704	26091192	chr18:26052704-26091192	0	-	26052704	26087577	789624	5	141,154,85,77,189,	0,4884,25371,34796,38299,
#Partially deleted in new
chr18	26052742	26091192	chr18:26052742-26091192	0	-	26068551	26087577	789624	6	103,154,64,85,77,97,	0,4846,15751,25333,34758,38353,
#Partially deleted in new
chr18	26052770	26090096	chr18:26052770-26090096	0	-	26052770	26087577	789624	5	75,154,85,77,272,	0,4818,25305,34730,37054,
#Partially deleted in new
chr18	26052822	26091216	chr18:26052822-26091216	0	-	26079064	26087577	789624	6	23,154,85,115,77,121,	0,4766,25253,26188,34678,38273,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	26057611	26090597	chr18:26057611-26090597	0	-	26081226	26090569	789624	5	131,85,141,77,97,	0,20464,23613,29889,32889,
#Partially deleted in new
chr18	26057694	26090135	chr18:26057694-26090135	0	-	26057694	26087577	789624	4	48,85,77,378,	0,20381,29806,32063,
#Partially deleted in new
chr18	26057698	26090625	chr18:26057698-26090625	0	-	26079064	26090569	789624	6	44,64,85,115,77,125,	0,10795,20377,21312,29802,32802,
#Partially deleted in new
chr18	26057718	26091192	chr18:26057718-26091192	0	-	26082497	26087577	789624	6	24,85,136,166,77,97,	0,20357,21292,24644,29782,33377,
#Partially deleted in new
chr18	26057731	26090608	chr18:26057731-26090608	0	-	26084138	26090569	789624	6	11,85,166,124,77,108,	0,20344,24631,26320,29769,32769,
#Partially deleted in new
chr18	26064831	26090135	chr18:26064831-26090135	0	-	26064831	26064831	8553170	4	40,85,77,378,	0,13244,22669,24926,
#Partially deleted in new
chr18	26068259	26078386	chr18:26068259-26078386	0	-	26068259	26068259	8553170	2	298,311,	0,9816,
#Partially deleted in new
chr18	26078075	26090625	chr18:26078075-26090625	0	-	26084138	26090569	789624	5	85,136,124,77,125,	0,935,5976,9425,12425,
#Partially deleted in new
chr18	26078102	26090625	chr18:26078102-26090625	0	-	26082497	26090569	789624	5	58,119,166,77,125,	0,2202,4260,9398,12398,
#Partially deleted in new
chr18	26080370	26090100	chr18:26080370-26090100	0	-	26080370	26080370	8553170	3	53,77,276,	0,7130,9454,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	26082382	26086027	chr18:26082382-26086027	0	-	26082382	26082382	8553170	3	146,124,105,	0,1669,3540,
#Deleted in new
chr18	26098838	26099226	chr18:26098838-26099226	7	+	26098838	26098838	16724991	1	388,	0,
#Partially deleted in new
chr18	26133851	26192824	chr18:26133851-26192824	1	+	26133965	26192411	789624	7	216,127,125,123,120,63,506,	0,10707,18006,24270,44978,45216,58467,
#Partially deleted in new
chr18	26133851	26193355	chr18:26133851-26193355	0	+	26133965	26144583	789624	8	216,65,127,125,123,120,63,1037,	0,6193,10707,18006,24270,44978,45216,58467,
#Partially deleted in new
chr18	26133873	26193355	chr18:26133873-26193355	1	+	26133965	26192411	789624	7	194,13,125,123,120,63,1037,	0,10685,17984,24248,44956,45194,58445,
#Partially deleted in new
chr18	26133876	26193355	chr18:26133876-26193355	3	+	26133965	26192411	789624	7	191,127,143,123,120,63,1037,	0,10682,17963,24245,44953,45191,58442,
#Partially deleted in new
chr18	26140085	26193355	chr18:26140085-26193355	1	+	26140085	26192411	789624	7	24,127,125,123,120,63,1037,	0,4473,11772,18036,38744,38982,52233,
#Deleted in new
chr18	26170725	26171284	chr18:26170725-26171284	7	-	26170725	26170725	16724991	1	559,	0,
#Deleted in new
chr18	26204868	26205904	chr18:26204868-26205904	7	+	26204868	26204868	16724991	3	286,193,388,	0,375,648,
#Partially deleted in new
chr18	26225935	26391685	chr18:26225935-26391685	3	+	26226933	26390012	789624	15	1341,146,108,162,123,90,618,136,106,170,131,126,57,105,1841,	0,39234,41580,48727,48995,56035,59946,66310,67490,89293,95134,101079,109239,131754,163909,
#Partially deleted in new
chr18	26226485	26390164	chr18:26226485-26390164	1	+	26226933	26390012	789624	15	791,146,108,162,123,90,618,151,106,170,131,126,57,105,320,	0,38684,41030,48177,48445,55485,59396,65745,66940,88743,94584,100529,108689,131204,163359,
#Partially deleted in new
chr18	26226882	26391683	chr18:26226882-26391683	0	+	26226933	26295219	789624	16	394,146,108,162,123,90,618,136,106,120,170,131,126,57,105,1839,	0,38287,40633,47780,48048,55088,58999,65363,66543,68312,88346,94187,100132,108292,130807,162962,
#Deleted in new
chr18	26255697	26256355	chr18:26255697-26256355	7	-	26255697	26255697	16724991	1	658,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	26266008	26267409	chr18:26266008-26267409	3	+	26266008	26266008	8553170	2	199,640,	0,761,
#Deleted in new
chr18	26348346	26349004	chr18:26348346-26349004	7	+	26348346	26348346	16724991	1	658,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	26366300	26366406	chr18:26366300-26366406	3	-	26366300	26366300	8553170	1	106,	0,
#Partially deleted in new
chr18	26422994	26426101	chr18:26422994-26426101	3	+	26422994	26422994	8553170	3	325,354,221,	0,1953,2886,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	26454909	26640344	chr18:26454909-26640344	1	-	26455742	26501235	0	6	992,306,145,179,91,34,	0,4710,21605,46162,174237,185401,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	26454912	26629242	chr18:26454912-26629242	1	-	26455742	26501235	0	5	989,306,145,179,96,	0,4707,21602,46159,174234,
#Partially deleted in new
chr18	26454912	26549814	chr18:26454912-26549814	1	-	26455742	26501235	0	5	989,306,145,179,86,	0,4707,21602,46159,94816,
#Partially deleted in new
chr18	26454973	26549435	chr18:26454973-26549435	1	-	26455742	26501235	0	5	928,306,145,179,545,	0,4646,21541,46098,93917,
#Partially deleted in new
chr18	26455497	26548590	chr18:26455497-26548590	3	-	26455742	26548536	789624	5	404,306,145,179,1863,	0,4122,21017,45574,91230,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	26455712	26476891	chr18:26455712-26476891	0	-	26455712	26455712	8553170	2	4213,377,	0,20802,
#Partially deleted in new
chr18	26455759	26657401	chr18:26455759-26657401	0	-	26455759	26657368	789624	5	142,306,145,179,42,	0,3860,20755,45312,201600,
#Partially deleted in new
chr18	26455769	26460876	chr18:26455769-26460876	0	-	26455769	26455769	8553170	3	132,306,71,	0,3850,5036,
#Partially deleted in new
chr18	26455891	26549819	chr18:26455891-26549819	0	-	26455891	26501235	789624	5	10,306,145,179,91,	0,3728,20623,45180,93837,
#Partially deleted in new
chr18	26459788	26546999	chr18:26459788-26546999	0	-	26459788	26501235	789624	3	137,179,272,	0,41283,86939,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	26542970	26545791	chr18:26542970-26545791	3	-	26542970	26542970	8553170	1	2821,	0,
#Partially deleted in new
chr18	26565722	26575626	chr18:26565722-26575626	3	-	26565722	26565722	8553170	2	1321,357,	0,9547,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	26581161	26657394	chr18:26581161-26657394	0	-	26581161	26581161	8553170	2	568,35,	0,76198,
#Deleted in new
chr18	26591466	26591535	chr18:26591466-26591535	3	-	26591466	26591466	789624	1	69,	0,
#Partially deleted in new
chr18	26599407	26600338	chr18:26599407-26600338	7	+	26599407	26599407	16724991	1	931,	0,
#Partially deleted in new
chr18	26655741	26930757	chr18:26655741-26930757	1	+	26655741	26655741	8553170	6	93,160,52,86,46,88,	0,53708,54246,269018,270075,274928,
#Partially deleted in new
chr18	26655742	26933085	chr18:26655742-26933085	0	+	26655742	26655742	8553170	5	92,86,46,154,93,	0,269017,270074,274927,277250,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	26687620	26703638	chr18:26687620-26703638	3	-	26687620	26687620	789624	2	2351,247,	0,15771,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	26688110	26689668	chr18:26688110-26689668	3	+	26688110	26688110	8553170	2	44,314,	0,1244,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	26689315	26689529	chr18:26689315-26689529	3	-	26689315	26689315	8553170	1	214,	0,
#Partially deleted in new
chr18	26703085	26925827	chr18:26703085-26925827	1	+	26703085	26703085	8553170	4	706,116,86,11,	0,61130,221674,222731,
#Partially deleted in new
chr18	26764138	26930725	chr18:26764138-26930725	0	+	26764138	26764138	8553170	4	193,86,46,56,	0,160621,161678,166531,
#Partially deleted in new
chr18	26822812	26823979	chr18:26822812-26823979	3	-	26822812	26822812	8553170	2	179,461,	0,706,
#Deleted in new
chr18	26831519	26832432	chr18:26831519-26832432	7	-	26831519	26831519	16724991	1	913,	0,
#Partially deleted in new
chr18	26852037	26865818	chr18:26852037-26865818	3	-	26856210	26865689	0	5	4452,81,165,415,161,	0,8734,9093,10144,13620,
#Partially deleted in new
chr18	26855816	26862848	chr18:26855816-26862848	1	-	26856210	26862562	0	4	673,81,165,667,	0,4955,5314,6365,
#Partially deleted in new
chr18	26856210	26863190	chr18:26856210-26863190	1	-	26856210	26862562	0	5	279,81,165,415,229,	0,4561,4920,5971,6751,
#Partially deleted in new
chr18	26856288	26862176	chr18:26856288-26862176	0	-	26856288	26856288	8553170	4	201,81,165,159,	0,4483,4842,5729,
#Partially deleted in new
chr18	26860690	26862406	chr18:26860690-26862406	0	-	26860690	26860690	8553170	3	162,165,225,	0,440,1491,
#Partially deleted in new
chr18	26860784	26865707	chr18:26860784-26865707	0	-	26860784	26865689	789624	4	68,165,292,50,	0,346,1397,4873,
#Partially deleted in new
chr18	26861253	26865771	chr18:26861253-26865771	0	-	26862327	26865689	789624	3	42,411,114,	0,928,4404,
#Partially deleted in new
chr18	26865237	26930727	chr18:26865237-26930727	0	+	26865237	26865237	8553170	5	123,86,46,154,58,	0,59522,60579,63007,65432,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	26865306	27190698	chr18:26865306-27190698	3	+	26865306	26865306	8553170	4	54,86,81,1956,	0,59453,282391,323436,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	26865307	26936673	chr18:26865307-26936673	1	+	26865307	26865307	5263520	8	53,122,86,46,154,130,134,2394,	0,27563,59452,60509,65362,67685,68308,68972,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	26906480	27185317	chr18:26906480-27185317	3	-	26916258	27142809	789624	6	10870,38,42,39,217,182,	0,37848,117635,141984,236208,278655,
#Partially deleted in new
chr18	26909820	26930727	chr18:26909820-26930727	0	+	26909820	26909820	8553170	4	360,86,46,58,	0,14939,15996,20849,
#Partially deleted in new
chr18	26915776	27143038	chr18:26915776-27143038	1	-	26916258	27142809	789624	5	1574,38,42,39,350,	0,28552,108339,132688,226912,
#Partially deleted in new
chr18	26915778	27185298	chr18:26915778-27185298	1	-	26917327	27142809	789624	5	1572,42,39,217,163,	0,108337,132686,226910,269357,
#Deleted in new
chr18	26952200	26952558	chr18:26952200-26952558	7	-	26952200	26952200	16724991	1	358,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	27225741	27247188	chr18:27225741-27247188	3	+	27225741	27225741	8553170	5	220,81,52,54,148,	0,9180,9866,17871,21299,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	27336378	27595164	chr18:27336378-27595164	3	-	27336378	27336378	8553170	5	809,96,187,45,215,	0,2228,165300,245592,258571,
#Partially deleted in new
chr18	27336692	27392867	chr18:27336692-27392867	1	-	27336692	27336692	8553170	4	495,173,81,84,	0,1914,37474,56091,
#Partially deleted in new
chr18	27336990	27342690	chr18:27336990-27342690	0	-	27336990	27336990	789624	3	197,96,188,	0,1616,5512,
#Partially deleted in new
chr18	27340741	27342684	chr18:27340741-27342684	1	-	27340741	27340741	8553170	2	390,182,	0,1761,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	27343251	27346110	chr18:27343251-27346110	3	+	27343251	27343251	8553170	3	60,122,740,	0,969,2119,
#Deleted in new
chr18	27355405	27355764	chr18:27355405-27355764	7	-	27355405	27355405	16724991	1	359,	0,
#Partially deleted in new
chr18	27397951	27401904	chr18:27397951-27401904	3	+	27397951	27397951	8553170	2	34,405,	0,3548,
#Partially deleted in new
chr18	27418883	27420435	chr18:27418883-27420435	7	-	27418883	27418883	16724991	2	400,814,	0,738,
#Deleted in new
chr18	27452513	27453657	chr18:27452513-27453657	7	-	27452513	27452513	16724991	1	1144,	0,
#Partially deleted in new
chr18	27578855	27595035	chr18:27578855-27595035	1	-	27578855	27578855	8553170	4	218,45,167,86,	0,3115,13852,16094,
#Partially deleted in new
chr18	27950965	28177446	chr18:27950965-28177446	3	-	27952152	28177022	789624	16	1394,165,140,234,234,143,254,186,138,173,145,156,147,227,112,484,	0,12391,31978,34034,34562,37558,39131,41689,42534,52031,54883,58751,60880,62717,196707,225997,
#Partially deleted in new
chr18	27951080	28036585	chr18:27951080-28036585	1	-	27952152	28036548	789624	15	1279,165,140,234,234,143,254,186,138,173,145,156,147,227,116,	0,12276,31863,33919,34447,37443,39016,41574,42419,51916,54768,58636,60765,62602,85389,
#Partially deleted in new
chr18	27954518	27963687	chr18:27954518-27963687	3	+	27954518	27954518	8553170	3	109,29,302,	0,4996,8867,
#Partially deleted in new
chr18	28005969	28045596	chr18:28005969-28045596	0	-	28005969	28045429	789624	5	24,156,147,227,186,	0,3747,5876,7713,39441,
#Partially deleted in new
chr18	28009803	28097229	chr18:28009803-28097229	0	-	28009803	28013826	789624	4	69,147,227,167,	0,2042,3879,87259,
#Partially deleted in new
chr18	28011917	28159297	chr18:28011917-28159297	0	-	28011917	28013826	789624	4	75,227,112,149,	0,1765,135755,147231,
#Deleted in new
chr18	28146232	28146703	chr18:28146232-28146703	3	-	28146232	28146232	8553170	1	471,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	28638713	28789580	chr18:28638713-28789580	3	+	28638713	28638713	8553170	3	65,151,707,	0,82223,150160,
#Deleted in new
chr18	28651731	28653208	chr18:28651731-28653208	7	+	28651731	28651731	16724991	1	1477,	0,
#Deleted in new
chr18	28785067	28789260	chr18:28785067-28789260	0	+	28785067	28785067	8553170	2	42,387,	0,3806,
#Deleted in new
chr18	28824651	28824826	chr18:28824651-28824826	7	-	28824651	28824651	16724991	1	175,	0,
#Partially deleted in new
chr18	29048619	29048719	chr18:29048619-29048719	3	+	29048619	29048619	8553170	1	100,	0,
#Deleted in new
chr18	29256816	29257060	chr18:29256816-29257060	7	-	29256816	29256816	16724991	1	244,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	29278508	29361963	chr18:29278508-29361963	3	-	29278508	29278508	8553170	3	155,236,80,	0,2849,83375,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	29528302	29548241	chr18:29528302-29548241	1	+	29528302	29528302	8553170	4	41,136,133,247,	0,2297,9936,19692,
#Deleted in new
chr18	30298909	30298960	chr18:30298909-30298960	3	+	30298909	30298909	5263520	1	51,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	30713274	30714286	chr18:30713274-30714286	3	+	30713274	30713274	8553170	2	166,406,	0,606,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	30780005	30780424	chr18:30780005-30780424	3	+	30780005	30780005	8553170	1	419,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	30984105	30984215	chr18:30984105-30984215	3	+	30984105	30984105	8553170	1	110,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr18	30990007	31042741	chr18:30990007-31042741	3	-	30994174	31042660	789624	16	4365,258,122,225,225,143,257,186,135,167,145,156,120,200,85,150,	0,6783,11610,14134,16899,18008,18261,28063,28658,32328,34341,35752,39501,40965,42184,52584,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr18	30990085	31042815	chr18:30990085-31042815	1	-	30994469	31042660	789624	17	4287,43,258,122,225,225,143,257,186,135,167,145,156,120,200,85,224,	0,4368,6705,11532,14056,16821,17930,18183,27985,28580,32250,34263,35674,39423,40887,42106,52506,
#Partially deleted in new
chr18	30994125	31006918	chr18:30994125-31006918	0	-	30994469	31006918	789624	6	247,43,258,122,225,12,	0,328,2665,7492,10016,12781,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr18	31058839	31102415	chr18:31058839-31102415	3	-	31068014	31101971	0	16	9373,258,125,237,225,143,257,186,135,167,145,156,120,200,85,513,	0,10054,11886,12765,15843,21007,21256,23398,24086,27736,28829,30599,32188,33261,34719,43063,
#Partially deleted in new
chr18	31065973	31102004	chr18:31065973-31102004	1	-	31068308	31101971	0	17	2239,46,258,125,237,225,143,257,186,135,167,145,156,120,200,85,102,	0,2325,2920,4752,5631,8709,13873,14122,16264,16952,20602,21695,23465,25054,26127,27585,35929,
#Partially deleted in new
chr18	31065997	31102522	chr18:31065997-31102522	1	-	31068014	31091072	8553170	17	2215,258,125,237,225,143,257,186,135,167,145,156,120,37,200,85,87,	0,2896,4728,5607,8685,13849,14098,16240,16928,20578,21671,23441,25030,25533,26103,27561,36438,
#Partially deleted in new
chr18	31101587	31162789	chr18:31101587-31162789	3	+	31101587	31101587	789624	4	136,72,90,255,	0,1535,49211,60947,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr18	31129235	31162856	chr18:31129235-31162856	1	-	31130802	31162594	0	17	1476,46,249,122,240,213,143,260,186,135,167,145,156,120,203,85,325,	0,1557,2358,3332,4655,5336,10512,10806,12763,14421,16375,19262,25538,26807,28135,30209,33296,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr18	31129235	31162856	chr18:31129235-31162856	3	-	31130513	31162594	0	16	1476,249,122,240,213,143,260,186,135,167,145,156,120,203,85,325,	0,2358,3332,4655,5336,10512,10806,12763,14421,16375,19262,25538,26807,28135,30209,33296,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	31131455	31132494	chr18:31131455-31132494	3	+	31131455	31131455	8553170	1	1039,	0,
#Partially deleted in new
chr18	31318088	31357029	chr18:31318088-31357029	3	+	31318300	31355346	789624	15	260,36,132,156,145,167,135,186,260,140,282,134,70,209,2733,	0,8492,8785,10100,11803,13612,15500,15928,18265,20226,21655,25361,25837,27901,36208,
#Partially deleted in new
chr18	31343367	31426927	chr18:31343367-31426927	1	-	31343367	31343367	789624	4	331,101,142,95,	0,4352,10944,83465,
#Partially deleted in new
chr18	31343630	31355667	chr18:31343630-31355667	1	+	31346021	31355346	789624	4	207,70,209,1371,	0,295,2359,10666,
#Deleted in new
chr18	31345361	31345467	chr18:31345361-31345467	3	-	31345361	31345361	8553170	1	106,	0,
#Partially deleted in new
chr18	31347667	31426988	chr18:31347667-31426988	1	-	31347667	31347667	8553170	4	153,142,137,156,	0,6644,16481,79165,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	31353961	31401667	chr18:31353961-31401667	2	-	31353961	31353961	8553170	4	104,142,137,89,	0,350,10187,47617,
#Partially deleted in new
chr18	31376776	31413916	chr18:31376776-31413916	3	+	31376911	31413595	789624	16	183,36,132,156,145,167,135,186,272,140,219,297,140,64,218,1089,	0,8359,9911,11590,12097,13879,14301,15378,22495,24104,26639,29300,32675,32968,34454,36051,
#Partially deleted in new
chr18	31376882	31414912	chr18:31376882-31414912	1	+	31376911	31413595	789624	15	77,36,132,156,145,167,135,186,272,140,219,297,140,339,2085,	0,8253,9805,11484,11991,13773,14195,15272,22389,23998,26533,29194,32569,34227,35945,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr18	31447794	31478702	chr18:31447794-31478702	3	+	31447877	31476260	0	16	131,36,132,156,145,167,129,186,272,140,225,261,140,64,284,3057,	0,8645,9198,10650,11238,12050,13038,13432,16316,17523,18735,21294,24489,24930,26326,27851,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	31496644	31497195	chr18:31496644-31497195	3	-	31496644	31496644	8553170	2	208,225,	0,326,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr18	31498042	31549008	chr18:31498042-31549008	3	+	31498251	31546743	0	15	254,36,135,162,145,167,138,186,266,143,228,228,122,333,3288,	0,20196,21760,22760,23056,24040,26405,26660,32944,37227,38159,40708,43150,44477,47678,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	31498219	31522608	chr18:31498219-31522608	1	+	31498251	31522258	789624	6	77,36,135,162,145,526,	0,20019,21583,22583,22879,23863,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	31542145	31556911	chr18:31542145-31556911	3	-	31542145	31542145	789624	6	176,294,171,360,74,949,	0,956,3590,7892,12496,13817,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	31550131	31556905	chr18:31550131-31556905	0	-	31550131	31550131	8553170	4	228,74,159,349,	0,4510,5831,6425,
#Partially deleted in new
chr18	31591725	31599011	chr18:31591725-31599011	1	+	31591902	31598675	0	4	246,131,136,444,	0,1170,3394,6842,
#Partially deleted in new
chr18	31591766	31598675	chr18:31591766-31598675	1	+	31591902	31598675	789624	5	205,131,136,39,45,	0,1129,3353,6801,6864,
#Deleted in new
chr18	31591876	31593545	chr18:31591876-31593545	0	+	31591876	31591876	8553170	2	95,650,	0,1019,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	31591876	31595849	chr18:31591876-31595849	0	+	31591876	31591876	8553170	3	95,131,730,	0,1019,3243,
#Partially deleted in new
chr18	31622246	31658464	chr18:31622246-31658464	0	-	31622246	31622246	8553170	5	3515,102,133,188,489,	0,4036,4742,8712,35729,
#Partially deleted in new
chr18	31623168	31684723	chr18:31623168-31684723	3	-	31625613	31684426	789624	9	2593,102,123,188,117,125,114,117,412,	0,3114,3830,7790,15475,22186,34807,43087,61143,
#Partially deleted in new
chr18	31624662	31684571	chr18:31624662-31684571	1	-	31625613	31684426	789624	8	1099,102,123,188,117,125,114,260,	0,1620,2336,6296,13981,20692,33313,59649,
#Partially deleted in new
chr18	31625484	31684504	chr18:31625484-31684504	1	-	31625613	31684426	789624	8	277,102,123,188,125,114,117,193,	0,798,1514,5474,19870,32491,40771,58827,
#Partially deleted in new
chr18	31657974	31685836	chr18:31657974-31685836	0	-	31657974	31666355	789624	3	115,117,107,	0,8281,27755,
#Deleted in new
chr18	31685654	31686823	chr18:31685654-31686823	3	+	31685654	31685654	8553170	1	1169,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	31718892	31719208	chr18:31718892-31719208	3	+	31718892	31718892	8553170	1	316,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	31724197	31726956	chr18:31724197-31726956	7	+	31724197	31724197	16724991	1	2759,	0,
#Deleted in new
chr18	31724227	31725764	chr18:31724227-31725764	5	+	31724227	31724227	16724991	2	448,946,	0,591,
#Deleted in new
chr18	31726042	31726397	chr18:31726042-31726397	7	-	31726042	31726042	16724991	1	355,	0,
#Deleted in new
chr18	31759561	31760880	chr18:31759561-31760880	3	-	31759767	31760691	789624	1	1319,	0,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr18	31829172	31943100	chr18:31829172-31943100	3	-	31830754	31942764	789624	29	1817,90,146,102,174,59,69,97,148,443,155,127,75,131,195,109,225,132,106,101,151,116,257,94,154,175,90,195,493,	0,2911,10139,17543,20393,23273,23422,24676,26487,28367,35454,37676,38229,41199,41753,44257,45307,61562,68613,71752,78287,79130,79581,80494,84196,87099,88405,102156,113435,
#Partially deleted in new
chr18	31829937	31943136	chr18:31829937-31943136	0	-	31857684	31942764	789624	30	1052,90,146,102,174,59,69,97,148,181,155,127,75,131,195,109,225,132,106,101,151,116,257,94,154,175,90,195,286,22,	0,2146,9374,16778,19628,22508,22657,23911,25722,27602,34689,36911,37464,40434,40988,43492,44542,60797,67848,70987,77522,78365,78816,79729,83431,86334,87640,101391,112670,113177,
#Partially deleted in new
chr18	31830497	31833406	chr18:31830497-31833406	0	-	31830497	31830497	8553170	3	492,90,131,	0,1586,2778,
#Partially deleted in new
chr18	31830589	31943026	chr18:31830589-31943026	1	-	31830754	31931518	789624	29	400,90,146,102,174,59,69,97,148,443,155,127,75,131,195,109,225,132,106,101,151,116,257,94,154,175,90,195,75,	0,1494,8722,16126,18976,21856,22005,23259,25070,26950,34037,36259,36812,39782,40336,42840,43890,60145,67196,70335,76870,77713,78164,79077,82779,85682,86988,100739,112362,
#Partially deleted in new
chr18	31830597	31839457	chr18:31830597-31839457	0	-	31830932	31839457	789624	3	387,90,146,	0,1486,8714,
#Partially deleted in new
chr18	31830920	31832595	chr18:31830920-31832595	0	-	31830920	31830920	8553170	2	69,512,	0,1163,
#Partially deleted in new
chr18	31846750	31852872	chr18:31846750-31852872	0	-	31846750	31846750	8553170	4	67,174,59,278,	0,2815,5695,5844,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	31870013	31871023	chr18:31870013-31871023	0	-	31870013	31870013	8553170	2	489,98,	0,912,
#Partially deleted in new
chr18	31871065	31891207	chr18:31871065-31891207	0	-	31871065	31871065	8553170	4	55,109,225,473,	0,2364,3414,19669,
#Partially deleted in new
chr18	31873569	31943106	chr18:31873569-31943106	1	-	31874431	31942764	789624	13	1135,132,106,101,151,116,257,94,154,175,90,195,499,	0,17165,24216,27355,33890,34733,35184,36097,39799,42702,44008,57759,69038,
#Deleted in new
chr18	31883287	31883728	chr18:31883287-31883728	7	+	31883287	31883287	16724991	1	441,	0,
#Deleted in new
chr18	31895744	31896410	chr18:31895744-31896410	3	-	31895744	31895744	8553170	1	666,	0,
#Partially deleted in new
chr18	31913501	31939462	chr18:31913501-31939462	0	-	31913501	31939462	789624	5	21,175,90,195,82,	0,2770,4076,17827,25879,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	31926467	31942989	chr18:31926467-31942989	0	-	31926467	31926467	8553170	3	138,195,382,	0,4861,16140,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	31937532	31937639	chr18:31937532-31937639	3	+	31937532	31937532	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	31939394	31953136	chr18:31939394-31953136	0	-	31939394	31939394	8553170	2	350,87,	0,13655,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	31942574	31944156	chr18:31942574-31944156	3	+	31942574	31942574	8553170	1	1582,	0,
#Partially deleted in new
chr18	31962177	31963618	chr18:31962177-31963618	7	+	31962177	31962177	16724991	1	1441,	0,
#Partially deleted in new
chr18	31966959	31967545	chr18:31966959-31967545	7	+	31966959	31966959	16724991	1	586,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	31982898	31986087	chr18:31982898-31986087	3	+	31982898	31982898	8553170	1	3189,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	32018371	32073213	chr18:32018371-32073213	3	+	32018863	32068384	0	6	656,154,95,91,108,4916,	0,18744,23807,27270,47530,49926,
#Partially deleted in new
chr18	32018828	32111779	chr18:32018828-32111779	3	+	32018828	32018828	8553170	5	199,154,95,91,26,	0,18287,23350,26813,92925,
#Deleted in new
chr18	32031034	32031359	chr18:32031034-32031359	3	+	32031034	32031034	8553170	1	325,	0,
#Partially deleted in new
chr18	32037184	32066141	chr18:32037184-32066141	0	+	32037184	32045677	789624	3	85,91,240,	0,8457,28717,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	32041822	32068489	chr18:32041822-32068489	0	+	32041822	32041822	8553170	5	161,95,91,108,192,	0,356,3819,24079,26475,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	32041905	32068550	chr18:32041905-32068550	0	+	32041905	32041905	8553170	3	368,91,253,	0,3736,26392,
#Partially deleted in new
chr18	32042078	32068428	chr18:32042078-32068428	0	+	32042078	32042078	8553170	4	195,91,108,131,	0,3563,23823,26219,
#Deleted in new
chr18	32075884	32076272	chr18:32075884-32076272	7	-	32075884	32075884	16724991	1	388,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	32091294	32092119	chr18:32091294-32092119	3	-	32091294	32091294	8553170	2	208,265,	0,560,
#Partially deleted in new
chr18	32091854	32131561	chr18:32091854-32131561	3	+	32092776	32129187	789624	8	381,187,166,116,57,112,108,2443,	0,845,19899,21890,31663,32879,34838,37264,
#Partially deleted in new
chr18	32091883	32113813	chr18:32091883-32113813	0	+	32091883	32091883	8553170	3	352,187,69,	0,816,21861,
#Partially deleted in new
chr18	32091890	32113846	chr18:32091890-32113846	0	+	32111781	32113846	789624	3	345,166,102,	0,19863,21854,
#Partially deleted in new
chr18	32092609	32113794	chr18:32092609-32113794	0	+	32092776	32113794	789624	3	277,166,50,	0,19144,21135,
#Partially deleted in new
chr18	32092662	32113941	chr18:32092662-32113941	0	+	32092662	32092662	8553170	3	224,166,197,	0,19091,21082,
#Partially deleted in new
chr18	32092689	32130715	chr18:32092689-32130715	1	+	32092776	32129187	789624	5	197,57,112,108,1597,	0,30828,32044,34003,36429,
#Partially deleted in new
chr18	32092701	32124769	chr18:32092701-32124769	0	+	32092776	32124769	789624	4	185,166,116,36,	0,19052,21043,32032,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	32122399	32124478	chr18:32122399-32124478	3	-	32122399	32122399	8553170	2	21,532,	0,1547,
#Partially deleted in new
chr18	32123524	32129302	chr18:32123524-32129302	0	+	32123524	32126765	789624	4	50,112,74,184,	0,1209,3202,5594,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	32176049	32176168	chr18:32176049-32176168	7	-	32176049	32176049	16724991	1	119,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	32185068	32204251	chr18:32185068-32204251	0	+	32192659	32204251	789624	7	108,19,45,44,79,118,70,	0,6753,7577,7705,10338,17824,19113,
#Partially deleted in new
chr18	32190023	32220404	chr18:32190023-32220404	3	+	32190070	32220245	0	15	110,19,45,44,79,118,179,219,153,216,444,180,127,205,174,	0,1798,2622,2750,5383,12869,14158,17228,18095,20477,23092,25058,26967,27737,30207,
#Partially deleted in new
chr18	32190024	32220404	chr18:32190024-32220404	1	+	32190070	32220245	789624	15	109,19,45,44,79,118,179,219,153,216,444,180,127,205,171,	0,1797,2621,2749,5382,12868,14157,17227,18094,20476,23091,25057,26966,27736,30209,
#Partially deleted in new
chr18	32190038	32203173	chr18:32190038-32203173	0	+	32190038	32190038	8553170	6	95,19,45,44,79,281,	0,1783,2607,2735,5368,12854,
#Deleted in new
chr18	32196025	32196966	chr18:32196025-32196966	7	-	32196025	32196025	16724991	1	941,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	32245945	32249032	chr18:32245945-32249032	3	-	32245945	32245945	8553170	2	191,277,	0,2810,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	32263134	32263234	chr18:32263134-32263234	3	-	32263134	32263134	8553170	1	100,	0,
#Partially deleted in new
chr18	32263521	32470484	chr18:32263521-32470484	3	-	32267870	32470428	0	6	5244,167,1173,131,141,177,	0,6695,23509,46671,129373,206786,
#Partially deleted in new
chr18	32267499	32470432	chr18:32267499-32470432	1	-	32267870	32470428	0	6	1269,167,1173,131,141,125,	0,2717,19531,42693,125395,202808,
#Partially deleted in new
chr18	32287436	32290340	chr18:32287436-32290340	3	+	32287436	32287436	8553170	2	696,76,	0,2828,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	32287875	32331670	chr18:32287875-32331670	0	-	32287875	32287875	8553170	3	328,131,91,	0,22317,43704,
#Deleted in new
chr18	32412181	32413236	chr18:32412181-32413236	3	+	32412181	32412181	8553170	2	490,367,	0,688,
#Deleted in new
chr18	32412213	32413176	chr18:32412213-32413176	7	-	32412213	32412213	16724991	1	963,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	32470287	32745567	chr18:32470287-32745567	3	+	32470287	32470287	8553170	7	51,308,330,127,1343,137,2716,	0,47536,90347,91125,267063,270502,272564,
#Deleted in new
chr18	32511662	32514634	chr18:32511662-32514634	7	+	32511662	32511662	16724991	1	2972,	0,
#Deleted in new
chr18	32511859	32513790	chr18:32511859-32513790	5	+	32511859	32511859	16724991	1	1931,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	32581527	32582828	chr18:32581527-32582828	3	+	32581527	32581527	8553170	2	49,215,	0,1086,
#Partially deleted in new
chr18	32672670	32773062	chr18:32672670-32773062	3	-	32674656	32770591	789624	9	2127,158,159,191,79,90,122,990,396,	0,4502,7498,7738,14484,22792,69257,96974,99996,
#Partially deleted in new
chr18	32733686	32772879	chr18:32733686-32772879	1	-	32734147	32770591	789624	4	559,122,990,213,	0,8241,35958,38980,
#Deleted in new
chr18	32769794	32774413	chr18:32769794-32774413	3	+	32769794	32769794	8553170	4	173,155,234,1099,	0,1159,2259,3520,
#Deleted in new
chr18	32769990	32772167	chr18:32769990-32772167	0	-	32769990	32772084	789624	2	644,121,	0,2056,
#Deleted in new
chr18	32779038	32779286	chr18:32779038-32779286	7	+	32779038	32779038	16724991	1	248,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	32833453	32840440	chr18:32833453-32840440	0	+	32833453	32833453	8553170	3	70,336,63,	0,1402,6924,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	32833466	32855290	chr18:32833466-32855290	1	+	32833466	32833466	8553170	4	57,336,132,119,	0,1389,13971,21705,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	32834988	32838178	chr18:32834988-32838178	1	+	32834988	32834988	8553170	2	203,270,	0,2920,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	32835099	32836313	chr18:32835099-32836313	0	+	32835099	32835099	8553170	2	92,295,	0,919,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	32835164	32938316	chr18:32835164-32938316	3	+	32835164	32835164	8553170	3	27,132,331,	0,77668,102821,
#Partially deleted in new
chr18	32937401	33136077	chr18:32937401-33136077	1	-	32938010	33136029	789624	3	690,135,51,	0,37145,198625,
#Partially deleted in new
chr18	32937402	33440081	chr18:32937402-33440081	1	-	32938010	33412088	789624	22	689,135,150,160,146,114,162,63,184,137,96,154,143,221,201,86,23,140,90,60,80,120,	0,37144,155358,274493,278147,285703,287372,289390,307842,329513,329799,355756,386088,395771,408808,411487,418921,432647,452137,459746,474628,502559,
#Partially deleted in new
chr18	32937405	33266965	chr18:32937405-33266965	0	-	32938010	33266965	789624	9	686,135,160,146,114,162,63,184,50,	0,37141,274490,278144,285700,287369,289387,307839,329510,
#Partially deleted in new
chr18	32937406	33440693	chr18:32937406-33440693	1	-	32938010	33412088	789624	23	685,135,150,160,146,114,162,63,184,137,96,154,143,221,201,86,23,140,90,60,80,120,41,	0,37140,155354,274489,278143,285699,287368,289386,307838,329509,329795,355752,386084,395767,408804,411483,418917,432643,452133,459742,474624,502555,503246,
#Partially deleted in new
chr18	32937624	33440721	chr18:32937624-33440721	3	-	32938010	33412088	789624	22	467,135,150,160,146,162,63,184,137,96,154,143,221,201,86,23,140,90,60,80,120,69,	0,36922,155136,274271,277925,287150,289168,307620,329291,329577,355534,385866,395549,408586,411265,418699,432425,451915,459524,474406,502337,503028,
#Partially deleted in new
chr18	32937663	33440045	chr18:32937663-33440045	1	-	32938010	33412088	789624	7	428,135,140,90,60,80,84,	0,36883,432386,451876,459485,474367,502298,
#Partially deleted in new
chr18	32937671	33412112	chr18:32937671-33412112	1	-	32938010	33412088	789624	22	420,135,72,150,160,146,114,162,63,184,137,96,154,143,221,201,86,23,140,90,60,82,	0,36875,45609,155089,274224,277878,285434,287103,289121,307573,329244,329530,355487,385819,395502,408539,411218,418652,432378,451868,459477,474359,
#Partially deleted in new
chr18	32937671	33440018	chr18:32937671-33440018	1	-	32938010	33412088	789624	23	420,135,72,150,160,146,114,162,63,184,137,96,154,143,221,201,86,23,140,90,60,80,57,	0,36875,45609,155089,274224,277878,285434,287103,289121,307573,329244,329530,355487,385819,395502,408539,411218,418652,432378,451868,459477,474359,502290,
#Deleted in new
chr18	32954074	32957998	chr18:32954074-32957998	3	+	32954074	32954074	8553170	4	12,142,177,227,	0,431,2559,3697,
#Partially deleted in new
chr18	32958002	33440693	chr18:32958002-33440693	1	-	32958194	33412088	789624	23	219,135,150,160,146,114,162,63,184,137,96,154,143,221,201,86,23,140,90,60,80,120,41,	0,16544,134758,253893,257547,265103,266772,268790,287242,308913,309199,335156,365488,375171,388208,390887,398321,412047,431537,439146,454028,481959,482650,
#Partially deleted in new
chr18	33323150	33346222	chr18:33323150-33346222	0	-	33323150	33323150	8553170	3	483,221,12,	0,10023,23060,
#Partially deleted in new
chr18	33333178	33440082	chr18:33333178-33440082	0	-	33333178	33412088	789624	9	216,201,86,23,140,90,60,80,121,	0,13032,15711,23145,36871,56361,63970,78852,106783,
#Partially deleted in new
chr18	33370086	33441101	chr18:33370086-33441101	0	-	33370086	33412088	789624	6	103,90,60,80,120,151,	0,19453,27062,41944,69875,70864,
#Partially deleted in new
chr18	33437632	33440543	chr18:33437632-33440543	0	-	33437632	33437632	8553170	3	144,120,71,	0,2329,2840,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	33552122	33578187	chr18:33552122-33578187	3	-	33552122	33552122	8553170	2	2068,424,	0,25641,
#Partially deleted in new
chr18	33578232	33751192	chr18:33578232-33751192	3	+	33578631	33746595	789624	12	453,83,109,109,122,118,120,164,97,106,1957,8305,	0,29361,66661,68012,83383,92440,93514,105172,153735,156077,160254,164655,
#Partially deleted in new
chr18	33578606	33743561	chr18:33578606-33743561	0	+	33578631	33690316	789624	14	79,83,3,109,109,122,118,120,164,78,97,106,1957,674,	0,28987,63214,66287,67638,83009,92066,93140,104798,111635,153361,155703,159880,164281,
#Partially deleted in new
chr18	33578620	33743581	chr18:33578620-33743581	0	+	33578631	33626993	789624	12	65,83,198,3,109,109,122,118,97,106,1957,694,	0,28973,48252,63200,66273,67624,82995,92052,153347,155689,159866,164267,
#Partially deleted in new
chr18	33578627	33683645	chr18:33578627-33683645	0	+	33578627	33578627	8553170	8	58,83,3,109,109,122,118,241,	0,28966,63193,66266,67617,82988,92045,104777,
#Partially deleted in new
chr18	33578631	33743604	chr18:33578631-33743604	0	+	33578631	33626910	789624	14	54,83,209,3,109,109,122,118,120,164,97,106,1957,717,	0,28962,48230,63189,66262,67613,82984,92041,93115,104773,153336,155678,159855,164256,
#Partially deleted in new
chr18	33578770	33626928	chr18:33578770-33626928	0	+	33578770	33578770	8553170	4	337,71,83,67,	0,26664,28823,48091,
#Partially deleted in new
chr18	33578881	33627043	chr18:33578881-33627043	0	+	33578881	33578881	8553170	4	92,122,83,171,	0,26655,28712,47991,
#Partially deleted in new
chr18	33578912	33743589	chr18:33578912-33743589	0	+	33644924	33743589	789624	15	195,122,83,209,3,109,109,122,118,120,164,97,106,1957,702,	0,26624,28681,47949,62908,65981,67332,82703,91760,92834,104492,153055,155397,159574,163975,
#Partially deleted in new
chr18	33605586	33627002	chr18:33605586-33627002	0	+	33605586	33605586	8553170	5	72,83,144,132,141,	0,2007,20178,21037,21275,
#Partially deleted in new
chr18	33605607	33646349	chr18:33605607-33646349	0	+	33605607	33605607	8553170	5	51,83,198,109,105,	0,1986,21265,39286,40637,
#Partially deleted in new
chr18	33605625	33670718	chr18:33605625-33670718	0	+	33605625	33605625	8553170	5	33,83,209,122,46,	0,1968,21236,55990,65047,
#Partially deleted in new
chr18	33605640	33661658	chr18:33605640-33661658	0	+	33605640	33605640	8553170	6	18,83,209,109,109,43,	0,1953,21221,39253,40604,55975,
#Partially deleted in new
chr18	33851099	34223551	chr18:33851099-34223551	3	-	33852841	34223253	789624	11	1936,181,114,192,180,284,133,113,112,150,562,	0,32144,91965,106226,107139,168218,242365,252947,253949,278771,371890,
#Partially deleted in new
chr18	33852289	34048594	chr18:33852289-34048594	1	-	33852841	34019518	789624	7	746,181,114,192,180,284,156,	0,30954,90775,105036,105949,167028,196149,
#Partially deleted in new
chr18	33852449	34222318	chr18:33852449-34222318	0	-	34128871	34222061	789624	11	586,181,114,180,284,133,113,112,41,150,299,	0,30794,90615,105789,166868,241015,251597,252599,276399,277421,369570,
#Partially deleted in new
chr18	33852449	34223471	chr18:33852449-34223471	1	-	33852841	34223253	789624	9	586,181,180,284,133,113,112,150,482,	0,30794,105789,166868,241015,251597,252599,277421,370540,
#Partially deleted in new
chr18	33852588	34222092	chr18:33852588-34222092	1	-	33852841	34222061	789624	11	447,181,114,192,180,284,133,113,112,150,73,	0,30655,90476,104737,105650,166729,240876,251458,252460,277282,369431,
#Partially deleted in new
chr18	33852588	34223205	chr18:33852588-34223205	0	-	33852841	34223205	789624	10	447,181,114,180,284,133,113,112,150,216,	0,30655,90476,105650,166729,240876,251458,252460,277282,370401,
#Partially deleted in new
chr18	33883364	34023639	chr18:33883364-34023639	0	-	33883364	34023458	789624	5	60,114,180,284,200,	0,59700,74874,135953,140075,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	34001697	34001799	chr18:34001697-34001799	3	-	34001697	34001697	8553170	1	102,	0,
#Partially deleted in new
chr18	34093460	34156693	chr18:34093460-34156693	0	-	34093460	34093460	8553170	5	137,113,112,150,55,	0,10586,11588,36410,63178,
#Partially deleted in new
chr18	34104051	34222110	chr18:34104051-34222110	0	-	34121298	34222061	789624	5	108,112,83,150,91,	0,997,17182,25819,117968,
#Partially deleted in new
chr18	34104053	34222323	chr18:34104053-34222323	0	-	34104053	34104053	8553170	3	106,150,304,	0,25817,117966,
#Partially deleted in new
chr18	34104123	34158629	chr18:34104123-34158629	0	-	34104123	34104123	8553170	5	36,112,150,114,44,	0,925,25747,52937,54462,
#Partially deleted in new
chr18	34105124	34222289	chr18:34105124-34222289	0	-	34183593	34222061	789624	4	36,150,109,270,	0,24746,78393,116895,
#Deleted in new
chr18	34221006	34221603	chr18:34221006-34221603	3	-	34221006	34221006	8553170	1	597,	0,
#Deleted in new
chr18	34222964	34224761	chr18:34222964-34224761	3	+	34222964	34222964	8553170	2	232,275,	0,1522,
#Deleted in new
chr18	34223331	34224952	chr18:34223331-34224952	0	-	34223331	34223331	8553170	3	49,308,309,	0,575,1312,
#Deleted in new
chr18	34223934	34224910	chr18:34223934-34224910	0	-	34223934	34223934	8553170	2	283,267,	0,709,
#Deleted in new
chr18	34225929	34226429	chr18:34225929-34226429	3	+	34225929	34225929	8553170	1	500,	0,
#Partially deleted in new
chr18	34493289	34891844	chr18:34493289-34891844	1	+	34755976	34884745	0	22	225,125,68,81,214,86,155,106,167,125,9,84,88,98,114,97,160,90,169,133,49,4079,	0,186178,262686,272671,300747,312929,318669,322619,324874,327501,331977,334303,355006,358541,364995,370676,381949,384429,386261,388779,391438,394476,
#Partially deleted in new
chr18	34493303	34866369	chr18:34493303-34866369	1	+	34755976	34866161	0	11	211,125,68,81,214,86,155,98,114,97,259,	0,186164,262672,272657,300733,312915,318655,358527,364981,370662,372807,
#Partially deleted in new
chr18	34493316	34829328	chr18:34493316-34829328	3	+	34755976	34829071	0	13	198,125,68,81,214,86,155,106,167,125,9,84,288,	0,186151,262659,272644,300720,312902,318642,322592,324847,327474,331950,334276,335724,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	34493370	34513848	chr18:34493370-34513848	0	+	34493370	34493370	8553170	3	144,115,334,	0,10672,20144,
#Partially deleted in new
chr18	34493409	34513937	chr18:34493409-34513937	0	+	34493409	34493409	8553170	2	105,423,	0,20105,
#Partially deleted in new
chr18	34493902	34794247	chr18:34493902-34794247	0	+	34755976	34794247	789624	5	119,125,68,81,211,	0,185565,262073,272058,300134,
#Deleted in new
chr18	34573986	34574523	chr18:34573986-34574523	7	-	34573986	34573986	16724991	1	537,	0,
#Partially deleted in new
chr18	34593317	34766027	chr18:34593317-34766027	0	+	34756009	34766027	789624	5	221,125,53,68,67,	0,86150,114856,162658,172643,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	34593334	34766023	chr18:34593334-34766023	0	+	34755976	34766023	789624	5	204,127,125,68,63,	0,69519,86133,162641,172626,
#Partially deleted in new
chr18	34593338	34891140	chr18:34593338-34891140	1	+	34755976	34890440	0	20	200,125,68,81,214,86,155,106,167,125,84,88,98,114,97,160,90,169,133,841,	0,86129,162637,172622,200698,212880,218620,222570,224825,227452,234254,254957,258492,264946,270627,281900,284380,286212,288730,296961,
#Partially deleted in new
chr18	34593357	34891844	chr18:34593357-34891844	1	+	34755976	34884745	0	22	181,125,68,81,214,86,155,106,167,125,84,88,98,114,97,21,160,90,169,133,49,4079,	0,86110,162618,172603,200679,212861,218601,222551,224806,227433,234235,254938,258473,264927,270608,272753,281881,284361,286193,288711,291370,294408,
#Partially deleted in new
chr18	34593357	34829328	chr18:34593357-34829328	1	+	34755976	34829071	0	12	181,125,68,81,214,86,155,106,167,125,84,288,	0,86110,162618,172603,200679,212861,218601,222551,224806,227433,234235,235683,
#Partially deleted in new
chr18	34593357	34756032	chr18:34593357-34756032	0	+	34755976	34756032	789624	4	181,125,213,57,	0,86110,90124,162618,
#Partially deleted in new
chr18	34593364	34891398	chr18:34593364-34891398	1	+	34755976	34884745	0	21	174,125,68,81,214,86,155,106,167,125,84,88,98,114,97,160,90,169,133,49,3633,	0,86103,162611,172596,200672,212854,218594,222544,224799,227426,234228,254931,258466,264920,270601,281874,284354,286186,288704,291363,294401,
#Partially deleted in new
chr18	34679536	34888125	chr18:34679536-34888125	1	+	34755976	34884745	0	21	56,68,81,214,86,155,106,167,125,9,84,88,98,114,97,160,90,169,133,49,360,	0,76439,86424,114500,126682,132422,136372,138627,141254,145730,148056,168759,172294,178748,184429,195702,198182,200014,202532,205191,208229,
#Partially deleted in new
chr18	34679536	34866980	chr18:34679536-34866980	1	+	34755976	34866161	0	16	56,68,81,214,86,155,106,167,125,9,84,88,98,114,97,870,	0,76439,86424,114500,126682,132422,136372,138627,141254,145730,148056,168759,172294,178748,184429,186574,
#Partially deleted in new
chr18	34709355	34812056	chr18:34709355-34812056	0	+	34709355	34709355	8553170	4	162,214,86,98,	0,84681,96863,102603,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr18	34710283	34868812	chr18:34710283-34868812	1	+	34755976	34866161	0	17	162,68,81,214,86,155,106,167,125,84,78,93,88,98,114,97,2702,	0,45692,55677,83753,95935,101675,105625,107880,110507,117309,127810,128461,138012,141547,148001,153682,155827,
#Partially deleted in new
chr18	34710296	34794185	chr18:34710296-34794185	0	+	34757215	34794185	789624	5	149,68,131,81,149,	0,45679,46861,55664,83740,
#Partially deleted in new
chr18	34710296	34866347	chr18:34710296-34866347	1	+	34755976	34866161	0	15	149,68,81,214,86,155,106,167,125,84,88,98,114,97,237,	0,45679,55664,83740,95922,101662,105612,107867,110494,117296,137999,141534,147988,153669,155814,
#Partially deleted in new
chr18	34755975	34891844	chr18:34755975-34891844	1	+	34755976	34884745	0	22	68,81,214,86,155,106,167,125,9,84,78,93,88,98,114,97,160,90,169,133,49,4079,	0,9985,38061,50243,55983,59933,62188,64815,69291,71617,82118,82769,92320,95855,102309,107990,119263,121743,123575,126093,128752,131790,
#Partially deleted in new
chr18	34755976	34884745	chr18:34755976-34884745	1	+	34755976	34884745	0	21	67,81,214,86,155,106,167,125,9,84,78,93,88,98,114,97,160,90,169,133,18,	0,9984,38060,50242,55982,59932,62187,64814,69290,71616,82117,82768,92319,95854,102308,107989,119262,121742,123574,126092,128751,
#Partially deleted in new
chr18	34815606	34820868	chr18:34815606-34820868	0	+	34815606	34815606	8553170	3	408,167,78,	0,2557,5184,
#Partially deleted in new
chr18	34817961	34827654	chr18:34817961-34827654	0	+	34818204	34827654	789624	3	369,125,62,	0,2829,9631,
#Partially deleted in new
chr18	34817961	34888120	chr18:34817961-34888120	1	+	34820868	34884745	789624	13	369,125,84,88,98,114,97,160,90,169,133,49,355,	0,2829,9631,30334,33869,40323,46004,57277,59757,61589,64107,66766,69804,
#Partially deleted in new
chr18	34818261	34858315	chr18:34818261-34858315	0	+	34818261	34818261	8553170	9	69,125,84,90,78,93,88,98,31,	0,2529,9331,11138,19832,20483,30034,33569,40023,
#Partially deleted in new
chr18	34818261	34858315	chr18:34818261-34858315	0	+	34818261	34818261	8553170	7	69,125,84,90,88,98,31,	0,2529,9331,11138,30034,33569,40023,
#Partially deleted in new
chr18	34818380	34887994	chr18:34818380-34887994	1	+	34820868	34884745	0	16	267,125,84,90,78,93,88,98,114,97,160,90,169,133,49,229,	0,2410,9212,11019,19713,20364,29915,33450,39904,45585,56858,59338,61170,63688,66347,69385,
#Partially deleted in new
chr18	34818390	34888010	chr18:34818390-34888010	1	+	34820868	34884745	0	14	257,125,84,78,88,98,114,97,160,90,169,133,49,245,	0,2400,9202,19703,29905,33440,39894,45575,56848,59328,61160,63678,66337,69375,
#Partially deleted in new
chr18	34818391	34887838	chr18:34818391-34887838	1	+	34820868	34884745	0	14	256,125,84,90,88,98,114,97,160,90,169,133,49,73,	0,2399,9201,11008,29904,33439,39893,45574,56847,59327,61159,63677,66336,69374,
#Partially deleted in new
chr18	34818391	34866980	chr18:34818391-34866980	1	+	34820868	34866161	0	8	256,125,84,88,98,114,97,870,	0,2399,9201,29904,33439,39893,45574,47719,
#Partially deleted in new
chr18	34818447	34866161	chr18:34818447-34866161	1	+	34820868	34864027	789624	8	200,125,84,88,98,114,93,51,	0,2343,9145,29848,33383,39837,45522,47663,
#Partially deleted in new
chr18	34822361	34858364	chr18:34822361-34858364	0	+	34827614	34858364	789624	5	205,84,88,98,80,	0,5231,25934,29469,35923,
#Partially deleted in new
chr18	34875236	34890543	chr18:34875236-34890543	1	+	34875298	34884745	789624	6	162,90,169,133,49,244,	0,2482,4314,6832,9491,15063,
#Partially deleted in new
chr18	34882088	34891140	chr18:34882088-34891140	0	+	34882088	34882088	8553170	2	113,841,	0,8211,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	34892012	34892535	chr18:34892012-34892535	0	-	34892012	34892012	8553170	1	523,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	34892019	34893273	chr18:34892019-34893273	3	-	34892019	34892019	8553170	2	431,114,	0,1140,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	34892075	34902885	chr18:34892075-34902885	0	-	34892075	34892075	8553170	2	375,33,	0,10777,
#Partially deleted in new
chr18	34976927	35143466	chr18:34976927-35143466	1	+	35070201	35140369	789624	8	152,62,128,146,214,140,159,3172,	0,28564,93267,120518,125018,150020,155104,163367,
#Partially deleted in new
chr18	34976927	35127048	chr18:34976927-35127048	0	+	35070201	35127048	789624	6	152,62,128,146,214,101,	0,28564,93267,120518,125018,150020,
#Partially deleted in new
chr18	34977050	35127022	chr18:34977050-35127022	0	+	35070253	35127022	789624	6	29,62,76,97,214,75,	0,28441,93144,120444,124895,149897,
#Partially deleted in new
chr18	34977054	35097558	chr18:34977054-35097558	0	+	35070201	35097558	789624	5	25,256,62,128,113,	0,11538,28437,93140,120391,
#Partially deleted in new
chr18	34977054	34988839	chr18:34977054-34988839	0	+	34977054	34977054	8553170	3	25,76,247,	0,7342,11538,
#Partially deleted in new
chr18	34978243	35143470	chr18:34978243-35143470	1	+	34978517	35140369	789624	8	298,62,128,146,214,140,159,3176,	0,27248,91951,119202,123702,148704,153788,162051,
#Partially deleted in new
chr18	34978425	35102059	chr18:34978425-35102059	0	+	35070201	35102059	789624	5	116,39,128,146,114,	0,27089,91769,119020,123520,
#Partially deleted in new
chr18	35041359	35143470	chr18:35041359-35143470	3	+	35041539	35140369	789624	7	302,128,146,214,140,159,3176,	0,28835,56086,60586,85588,90672,98935,
#Partially deleted in new
chr18	35041403	35143470	chr18:35041403-35143470	1	+	35041570	35140369	789624	6	258,146,214,140,159,3176,	0,56042,60542,85544,90628,98891,
#Partially deleted in new
chr18	35041430	35127617	chr18:35041430-35127617	1	+	35041539	35127117	789624	5	231,128,146,214,670,	0,28764,56015,60515,85517,
#Partially deleted in new
chr18	35041489	35070644	chr18:35041489-35070644	0	+	35041489	35041489	8553170	2	172,450,	0,28705,
#Partially deleted in new
chr18	35041649	35143470	chr18:35041649-35143470	1	+	35070201	35140369	789624	7	117,128,146,214,140,159,3176,	0,28545,55796,60296,85298,90382,98645,
#Deleted in new
chr18	35131917	35140497	chr18:35131917-35140497	0	+	35131917	35131917	8553170	2	273,203,	0,8377,
#Deleted in new
chr18	35144941	35145417	chr18:35144941-35145417	3	+	35144941	35144941	8553170	1	476,	0,
#Deleted in new
chr18	35241029	35243000	chr18:35241029-35243000	0	+	35241029	35241029	8553170	2	80,610,	0,1361,
#Deleted in new
chr18	35241035	35242886	chr18:35241035-35242886	0	+	35242470	35242886	789624	2	36,496,	0,1355,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	35241036	35249803	chr18:35241036-35249803	3	+	35242470	35246310	789624	4	73,494,142,4542,	0,1354,2115,4225,
#Deleted in new
chr18	35241036	35244100	chr18:35241036-35244100	1	+	35242470	35243361	789624	3	73,494,949,	0,1354,2115,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	35241050	35267133	chr18:35241050-35267133	0	+	35241050	35241050	8553170	6	59,142,90,171,122,441,	0,2101,4211,13181,16877,25642,
#Partially deleted in new
chr18	35241054	35258394	chr18:35241054-35258394	1	+	35242470	35257938	789624	6	55,494,142,90,171,467,	0,1336,2097,4207,13177,16873,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	35241054	35259227	chr18:35241054-35259227	1	+	35242470	35257938	789624	5	55,494,142,171,1300,	0,1336,2097,13177,16873,
#Deleted in new
chr18	35241056	35244069	chr18:35241056-35244069	1	+	35242470	35243361	789624	3	634,494,918,	0,1334,2095,
#Partially deleted in new
chr18	35242389	35258394	chr18:35242389-35258394	1	+	35242470	35257938	789624	3	495,142,467,	0,762,15538,
#Deleted in new
chr18	35242472	35243284	chr18:35242472-35243284	0	+	35242472	35243284	789624	2	469,133,	0,679,
#Deleted in new
chr18	35242794	35243238	chr18:35242794-35243238	0	+	35242794	35242794	8553170	2	158,87,	0,357,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	35251057	35290245	chr18:35251057-35290245	1	-	35253449	35254373	789624	2	3324,115,	0,39073,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	35251065	35290208	chr18:35251065-35290208	1	-	35253449	35264352	789624	4	3316,145,511,125,	0,12447,12879,39018,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	35251067	35290232	chr18:35251067-35290232	3	-	35253449	35264352	789624	5	3314,145,511,204,149,	0,12445,12877,16408,39016,
#Deleted in new
chr18	35252593	35254621	chr18:35252593-35254621	0	-	35252593	35252593	8553170	1	2028,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	35253458	35264223	chr18:35253458-35264223	1	-	35253458	35264223	789624	9	765,27,24,53,38,32,47,33,286,	0,1503,2319,2810,5370,6213,6647,6916,10479,
#Partially deleted in new
chr18	35254196	35258279	chr18:35254196-35258279	0	+	35254196	35254196	8553170	2	206,352,	0,3731,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	35257039	35257512	chr18:35257039-35257512	3	+	35257039	35257039	8553170	1	473,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	35260642	35290197	chr18:35260642-35290197	1	-	35263127	35264352	789624	4	2598,145,511,114,	0,2870,3302,29441,
#Deleted in new
chr18	35263295	35264046	chr18:35263295-35264046	0	-	35263483	35264046	789624	2	362,102,	0,649,
#Deleted in new
chr18	35263295	35264384	chr18:35263295-35264384	1	-	35263617	35264352	789624	2	343,167,	0,922,
#Partially deleted in new
chr18	35263584	35290221	chr18:35263584-35290221	1	-	35263683	35264352	789624	3	129,511,91,	0,360,26546,
#Partially deleted in new
chr18	35264145	35267948	chr18:35264145-35267948	0	-	35264145	35264352	789624	3	310,207,71,	0,3330,3732,
#Partially deleted in new
chr18	35264209	35290229	chr18:35264209-35290229	0	-	35264209	35264352	789624	3	246,204,99,	0,3266,25921,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	35268217	35270238	chr18:35268217-35270238	3	+	35268217	35268217	8553170	1	2021,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	35280866	35290201	chr18:35280866-35290201	3	-	35280866	35280866	8553170	2	4311,71,	0,9264,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	35289344	35290232	chr18:35289344-35290232	0	-	35289344	35289344	8553170	2	479,102,	0,786,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	35290281	35310766	chr18:35290281-35310766	5	+	35290281	35290281	16724991	3	110,223,4791,	0,728,15694,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	35290323	35328390	chr18:35290323-35328390	7	+	35290323	35290323	16724991	5	68,223,2574,114,1594,	0,686,15652,32064,36473,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	35290335	35308110	chr18:35290335-35308110	4	+	35290335	35290335	16724991	2	56,2135,	0,15640,
#Partially deleted in new
chr18	35290383	35306991	chr18:35290383-35306991	4	+	35290383	35290383	16724991	2	849,1016,	0,15592,
#Partially deleted in new
chr18	35291183	35307896	chr18:35291183-35307896	5	+	35291183	35291183	16724991	2	49,1921,	0,14792,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	35317395	35317848	chr18:35317395-35317848	3	+	35317395	35317395	8553170	1	453,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	35332211	35344456	chr18:35332211-35344456	3	-	35337231	35340650	0	4	5559,148,503,97,	0,7617,8019,12148,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	35332226	35344456	chr18:35332226-35344456	1	-	35337231	35340650	0	4	5544,148,503,87,	0,7602,8004,12143,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	35332226	35340654	chr18:35332226-35340654	1	-	35339059	35340650	0	3	6847,148,424,	0,7602,8004,
#Partially deleted in new
chr18	35340234	35345482	chr18:35340234-35345482	0	-	35340234	35340650	789624	3	499,53,204,	0,4434,5044,
#Partially deleted in new
chr18	35340344	35343932	chr18:35340344-35343932	0	-	35340344	35340650	789624	2	389,189,	0,3399,
#Partially deleted in new
chr18	35366696	35377337	chr18:35366696-35377337	1	-	35368350	35374292	789624	5	1749,345,145,489,60,	0,2619,6759,7179,10581,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	35367602	35377337	chr18:35367602-35377337	3	-	35369214	35374292	789624	4	2058,145,489,60,	0,5853,6273,9675,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	35371810	35374365	chr18:35371810-35374365	0	-	35371810	35371810	8553170	1	2555,	0,
#Partially deleted in new
chr18	35372829	35377337	chr18:35372829-35377337	1	-	35373384	35374292	789624	3	771,489,60,	0,1046,4448,
#Partially deleted in new
chr18	35373898	35377337	chr18:35373898-35377337	0	-	35373898	35374292	789624	3	466,144,60,	0,2228,3379,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	35374173	35377310	chr18:35374173-35377310	0	-	35374173	35374292	789624	3	191,354,33,	0,296,3104,
#Deleted in new
chr18	35383353	35384025	chr18:35383353-35384025	7	-	35383353	35383353	16724991	1	672,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	35403995	35406528	chr18:35403995-35406528	3	-	35403995	35403995	8553170	1	2533,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	35443868	35466752	chr18:35443868-35466752	0	-	35443868	35443868	8553170	3	154,81,129,	0,3006,22755,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	35443870	35497940	chr18:35443870-35497940	3	-	35443887	35497874	789624	3	152,81,222,	0,3004,53848,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	35445742	35467081	chr18:35445742-35467081	3	-	35445742	35445742	8553170	3	158,81,458,	0,1132,20881,
#Partially deleted in new
chr18	35446907	35467088	chr18:35446907-35467088	0	-	35446907	35446907	8553170	3	48,58,465,	0,577,19716,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	35452229	35497933	chr18:35452229-35497933	1	-	35454821	35497874	789624	5	2739,68,112,111,215,	0,26052,27070,28223,45489,
#Partially deleted in new
chr18	35468332	35497991	chr18:35468332-35497991	3	-	35468610	35497874	789624	5	410,68,112,111,273,	0,9949,10967,12120,29386,
#Partially deleted in new
chr18	35468333	35497904	chr18:35468333-35497904	1	-	35468610	35497874	789624	2	409,186,	0,29385,
#Duplicated in new
chr18	35468462	35497943	chr18:35468462-35497943	1	-	35468610	35497874	789624	7	280,68,112,111,54,54,225,	0,9819,10837,11990,18923,20869,29256,
#Partially deleted in new
chr18	35468583	35497649	chr18:35468583-35497649	1	-	35468610	35480554	789624	5	159,68,112,111,144,	0,9698,10716,11869,28922,
#Partially deleted in new
chr18	35468670	35497960	chr18:35468670-35497960	0	-	35468670	35497874	789624	3	72,68,242,	0,9611,29048,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	35468710	35487470	chr18:35468710-35487470	0	-	35468710	35487470	789624	5	32,68,112,111,85,	0,9571,10589,11742,18675,
#Partially deleted in new
chr18	35478994	35497979	chr18:35478994-35497979	0	-	35478994	35478994	8553170	3	417,111,261,	0,1458,18724,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	35479330	35497935	chr18:35479330-35497935	0	-	35487763	35497874	789624	5	81,108,438,54,217,	0,1125,8055,10001,18388,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	35480466	35497599	chr18:35480466-35497599	0	-	35480466	35480554	789624	3	97,108,94,	0,16308,17039,
#Deleted in new
chr18	35483430	35483667	chr18:35483430-35483667	3	-	35483430	35483430	8553170	1	237,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	35489077	35497960	chr18:35489077-35497960	0	-	35489077	35489077	8553170	2	308,242,	0,8641,
#Deleted in new
chr18	35497508	35497942	chr18:35497508-35497942	0	-	35497508	35497508	8553170	1	434,	0,
#Partially deleted in new
chr18	35581116	35654593	chr18:35581116-35654593	0	+	35581116	35581116	8553170	3	187,51,34,	0,46317,73443,
#Partially deleted in new
chr18	35581739	35663804	chr18:35581739-35663804	0	+	35654662	35663804	789624	3	123,242,177,	0,72820,81888,
#Deleted in new
chr18	35591736	35591806	chr18:35591736-35591806	3	+	35591736	35591736	5263520	1	70,	0,
#Deleted in new
chr18	35595900	35597599	chr18:35595900-35597599	3	+	35595900	35595900	8553170	1	1699,	0,
#Partially deleted in new
chr18	35627428	35710292	chr18:35627428-35710292	0	+	35654662	35691197	789624	11	56,242,175,167,208,171,118,214,191,135,669,	0,27131,36199,50162,55962,59587,61744,63583,75376,76080,82195,
#Partially deleted in new
chr18	35654559	35711834	chr18:35654559-35711834	3	+	35654662	35709770	789624	11	242,175,167,208,171,118,181,140,99,135,2211,	0,9068,23031,28831,32456,34613,36452,37621,48337,48949,55064,
#Partially deleted in new
chr18	35654571	35664517	chr18:35654571-35664517	1	+	35654662	35663806	789624	2	230,890,	0,9056,
#Partially deleted in new
chr18	35654655	35709780	chr18:35654655-35709780	0	+	35654662	35659871	789624	12	146,73,175,167,208,171,118,181,140,99,135,157,	0,5202,8972,22935,28735,32360,34517,36356,37525,48241,48853,54968,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	35716369	35717978	chr18:35716369-35717978	3	+	35716369	35716369	8553170	1	1609,	0,
#Partially deleted in new
chr18	35841758	35842617	chr18:35841758-35842617	7	+	35841758	35841758	16724991	1	859,	0,
#Deleted in new
chr18	35904817	35904926	chr18:35904817-35904926	3	-	35904817	35904817	5263520	1	109,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	35934087	35934142	chr18:35934087-35934142	3	-	35934087	35934087	5263520	1	55,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	35951802	35965840	chr18:35951802-35965840	1	-	35951802	35951802	8553170	3	235,122,96,	0,875,13942,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	35951802	35966118	chr18:35951802-35966118	3	-	35951802	35951802	8553170	2	235,374,	0,13942,
#Partially deleted in new
chr18	35972082	35979278	chr18:35972082-35979278	3	+	35972728	35979006	789624	5	723,23,200,191,444,	0,802,2813,5327,6752,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	35972150	35973916	chr18:35972150-35973916	3	+	35972150	35972150	8553170	1	1766,	0,
#Partially deleted in new
chr18	35972624	35979286	chr18:35972624-35979286	1	+	35975059	35979006	789624	4	216,200,191,452,	0,2271,4785,6210,
#Partially deleted in new
chr18	35972624	35979286	chr18:35972624-35979286	1	+	35972728	35978927	789624	4	181,23,200,452,	0,260,2271,6210,
#Partially deleted in new
chr18	35972633	35978939	chr18:35972633-35978939	0	+	35975059	35978939	789624	4	207,200,191,105,	0,2262,4776,6201,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	35972680	35973340	chr18:35972680-35973340	0	+	35972680	35972680	8553170	2	125,456,	0,204,
#Partially deleted in new
chr18	35972681	35978873	chr18:35972681-35978873	0	+	35975059	35978873	789624	4	226,200,191,39,	0,2214,4728,6153,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	35972712	35973648	chr18:35972712-35973648	0	+	35972712	35972712	8553170	2	128,57,	0,879,
#Partially deleted in new
chr18	35972784	35979278	chr18:35972784-35979278	1	+	35975059	35979006	789624	4	123,200,191,444,	0,2111,4625,6050,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	35984386	35993300	chr18:35984386-35993300	0	-	35993150	35993300	789624	4	325,49,70,199,	0,951,6139,8715,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	35984388	35993163	chr18:35984388-35993163	0	-	35993150	35993163	8553170	5	140,49,104,70,62,	0,949,4343,6137,8713,
#Partially deleted in new
chr18	35989823	36067576	chr18:35989823-36067576	3	-	35993150	36067404	0	7	3477,176,127,98,107,130,323,	0,37076,37360,40984,41167,43884,77430,
#Partially deleted in new
chr18	35989823	36067530	chr18:35989823-36067530	1	-	35993150	36040849	0	9	772,199,176,127,98,107,130,59,277,	0,3278,37076,37360,40984,41167,43884,50983,77430,
#Partially deleted in new
chr18	35989885	36067556	chr18:35989885-36067556	1	-	35993150	36067404	0	8	710,199,176,127,98,107,130,303,	0,3216,37014,37298,40922,41105,43822,77368,
#Partially deleted in new
chr18	35993039	36067559	chr18:35993039-36067559	1	-	35993150	36040849	0	8	261,176,127,98,107,130,59,306,	0,33860,34144,37768,37951,40668,47767,74214,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	36024888	36030850	chr18:36024888-36030850	0	-	36026875	36030850	789624	3	2187,127,43,	0,2295,5919,
#Partially deleted in new
chr18	36025598	36067557	chr18:36025598-36067557	0	-	36025598	36067404	789624	7	80,176,127,98,107,130,304,	0,1301,1585,5209,5392,8109,41655,
#Deleted in new
chr18	36025598	36028190	chr18:36025598-36028190	0	-	36025598	36025598	8553170	2	1477,1007,	0,1585,
#Partially deleted in new
chr18	36033751	36067576	chr18:36033751-36067576	0	-	36063004	36067404	789624	4	86,59,98,323,	0,7055,29226,33502,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	36052874	36064424	chr18:36052874-36064424	0	-	36052874	36052874	8553170	3	46,98,432,	0,10103,11118,
#Partially deleted in new
chr18	36108531	36129318	chr18:36108531-36129318	3	-	36109592	36127007	789624	10	1214,191,81,378,106,219,170,181,798,205,	0,2527,3969,5565,8142,13520,14963,15988,17687,20582,
#Partially deleted in new
chr18	36109147	36129381	chr18:36109147-36129381	1	-	36109592	36127007	789624	10	598,191,81,378,106,219,170,181,798,281,	0,1911,3353,4949,7526,12904,14347,15372,17071,19953,
#Partially deleted in new
chr18	36110999	36129385	chr18:36110999-36129385	1	-	36111046	36124664	789624	8	250,81,378,106,219,170,181,272,	0,1501,3097,5674,11052,12495,13520,18114,
#Partially deleted in new
chr18	36111055	36122115	chr18:36111055-36122115	0	-	36111055	36122111	789624	5	194,81,378,106,64,	0,1445,3041,5618,10996,
#Partially deleted in new
chr18	36129443	36142311	chr18:36129443-36142311	0	+	36138796	36142311	789624	7	54,79,71,157,78,65,31,	0,3794,6863,8826,9351,11693,12837,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr18	36129870	36180556	chr18:36129870-36180556	3	+	36129933	36174641	789624	22	201,79,71,157,78,65,67,141,96,101,132,150,189,70,96,58,73,193,122,134,114,6072,	0,3367,6436,8399,8924,11266,12410,12955,15068,16077,16379,24979,26595,28964,29864,30087,31061,34604,37230,40192,41176,44614,
#Partially deleted in new
chr18	36129879	36141191	chr18:36129879-36141191	0	+	36129933	36136324	789624	5	192,71,157,78,55,	0,6427,8390,8915,11257,
#Partially deleted in new
chr18	36129890	36174648	chr18:36129890-36174648	1	+	36129933	36174641	789624	21	181,79,71,157,65,67,141,96,101,132,150,189,70,96,58,73,193,122,134,114,164,	0,3347,6416,8379,11246,12390,12935,15048,16057,16359,24959,26575,28944,29844,30067,31041,34584,37210,40172,41156,44594,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	36129893	36136632	chr18:36129893-36136632	0	+	36129893	36129893	8553170	3	178,79,326,	0,3344,6413,
#Partially deleted in new
chr18	36129894	36142857	chr18:36129894-36142857	0	+	36129933	36136324	789624	6	177,71,157,65,67,32,	0,6412,8375,11242,12386,12931,
#Partially deleted in new
chr18	36129897	36174651	chr18:36129897-36174651	1	+	36129933	36174641	789624	23	174,79,71,157,78,195,65,67,141,96,101,132,150,189,70,96,58,73,193,122,134,114,167,	0,3340,6409,8372,8897,9521,11239,12383,12928,15041,16050,16352,24952,26568,28937,29837,30060,31034,34577,37203,40165,41149,44587,
#Partially deleted in new
chr18	36129898	36174720	chr18:36129898-36174720	1	+	36129933	36174641	789624	19	173,79,71,157,141,96,101,132,150,189,70,96,58,73,193,122,134,114,236,	0,3339,6408,8371,12927,15040,16049,16351,24951,26567,28936,29836,30059,31033,34576,37202,40164,41148,44586,
#Partially deleted in new
chr18	36129900	36174721	chr18:36129900-36174721	0	+	36129933	36170156	789624	22	171,79,71,157,78,65,67,141,96,101,132,150,189,70,96,58,73,193,70,134,114,237,	0,3337,6406,8369,8894,11236,12380,12925,15038,16047,16349,24949,26565,28934,29834,30057,31031,34574,37252,40162,41146,44584,
#Partially deleted in new
chr18	36129901	36138641	chr18:36129901-36138641	0	+	36129901	36129901	8553170	4	170,79,71,372,	0,3336,6405,8368,
#Partially deleted in new
chr18	36129902	36139760	chr18:36129902-36139760	0	+	36129902	36129902	8553170	5	169,79,71,157,99,	0,3335,6404,8367,9759,
#Partially deleted in new
chr18	36129916	36142349	chr18:36129916-36142349	0	+	36129933	36138369	789624	7	155,79,71,132,78,65,69,	0,3321,6390,8378,8878,11220,12364,
#Partially deleted in new
chr18	36129919	36174648	chr18:36129919-36174648	1	+	36129933	36174641	789624	21	152,79,71,157,195,65,67,141,96,101,150,189,70,96,58,73,193,122,134,114,164,	0,3318,6387,8350,9499,11217,12361,12906,15019,16028,24930,26546,28915,29815,30038,31012,34555,37181,40143,41127,44565,
#Partially deleted in new
chr18	36129923	36174648	chr18:36129923-36174648	1	+	36129933	36174641	789624	20	148,79,71,157,65,67,141,96,101,150,189,70,96,58,73,193,122,134,114,164,	0,3314,6383,8346,11213,12357,12902,15015,16024,24926,26542,28911,29811,30034,31008,34551,37177,40139,41123,44561,
#Partially deleted in new
chr18	36129924	36164485	chr18:36129924-36164485	0	+	36129933	36160949	789624	5	147,79,71,73,11,	0,3313,6382,31007,34550,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	36137173	36142947	chr18:36137173-36142947	0	+	36137173	36137173	8553170	6	62,157,78,65,67,122,	0,1096,1621,3963,5107,5652,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	36137183	36142311	chr18:36137183-36142311	0	+	36137183	36137183	8553170	6	52,157,78,195,65,31,	0,1086,1611,2235,3953,5097,
#Partially deleted in new
chr18	36138094	36142860	chr18:36138094-36142860	0	+	36138094	36138094	8553170	5	332,78,65,67,35,	0,700,3042,4186,4731,
#Partially deleted in new
chr18	36138806	36145358	chr18:36138806-36145358	0	+	36138806	36138806	8553170	5	66,65,67,141,420,	0,2330,3474,4019,6132,
#Partially deleted in new
chr18	36141372	36146376	chr18:36141372-36146376	0	+	36141372	36141372	8553170	6	50,67,141,96,101,127,	0,908,1453,3566,4575,4877,
#Partially deleted in new
chr18	36154930	36164667	chr18:36154930-36164667	0	+	36154930	36154930	8553170	6	69,189,70,96,73,193,	0,1535,3904,4804,6001,9544,
#Partially deleted in new
chr18	36158502	36164620	chr18:36158502-36164620	0	+	36158502	36158502	8553170	6	112,70,96,58,73,146,	0,332,1232,1455,2429,5972,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	36159757	36175032	chr18:36159757-36175032	0	+	36159757	36167113	789624	6	73,58,122,134,114,548,	0,200,7343,10305,11289,14727,
#Partially deleted in new
chr18	36159956	36165225	chr18:36159956-36165225	0	+	36159956	36159956	8553170	3	59,73,751,	0,975,4518,
#Partially deleted in new
chr18	36166888	36174645	chr18:36166888-36174645	0	+	36166888	36166888	8553170	5	159,67,134,114,161,	0,267,3174,4158,7596,
#Partially deleted in new
chr18	36166965	36174653	chr18:36166965-36174653	0	+	36166965	36166965	8553170	4	257,134,114,169,	0,3097,4081,7519,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	36169935	36174745	chr18:36169935-36174745	0	+	36169935	36169935	8553170	3	261,114,261,	0,1111,4549,
#Partially deleted in new
chr18	36170878	36174616	chr18:36170878-36174616	0	+	36170878	36170878	8553170	2	282,132,	0,3606,
#Partially deleted in new
chr18	36179995	36187448	chr18:36179995-36187448	3	-	36179995	36179995	789624	2	395,214,	0,7239,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr18	36187518	36272157	chr18:36187518-36272157	3	+	36187539	36268685	789624	15	163,90,67,642,77,200,117,462,163,79,125,106,139,105,3625,	0,7738,11171,12164,15594,17558,25847,27997,32536,61403,63640,69449,72518,79230,81014,
#Deleted in new
chr18	36189823	36190272	chr18:36189823-36190272	3	+	36189823	36189823	8553170	1	449,	0,
#Partially deleted in new
chr18	36256846	36266814	chr18:36256846-36266814	0	+	36256846	36256846	8553170	3	227,139,66,	0,3190,9902,
#Deleted in new
chr18	36273573	36274599	chr18:36273573-36274599	7	+	36273573	36273573	16724991	1	1026,	0,
#Deleted in new
chr18	36278734	36279119	chr18:36278734-36279119	7	-	36278734	36278734	16724991	1	385,	0,
#Partially deleted in new
chr18	36297713	36780055	chr18:36297713-36780055	3	+	36297835	36779530	789624	25	287,107,65,68,106,95,112,95,144,239,114,135,51,215,297,884,159,183,120,162,191,193,175,162,608,	0,57825,74966,204218,214724,278737,297073,304960,314238,327797,360361,383722,389414,395495,411381,420118,432932,442942,445023,446318,449231,457405,462894,471551,481734,
#Partially deleted in new
chr18	36297716	36711469	chr18:36297716-36711469	0	+	36297716	36297716	8553170	14	284,107,65,68,106,95,112,95,144,239,114,135,215,2375,	0,57822,74963,204215,214721,278734,297070,304957,314235,327794,360358,383719,395492,411378,
#Partially deleted in new
chr18	36297835	36779779	chr18:36297835-36779779	1	+	36297835	36779530	789624	24	165,107,65,68,106,95,112,95,144,239,114,135,215,297,884,159,183,120,162,191,193,175,162,332,	0,57703,74844,204096,214602,278615,296951,304838,314116,327675,360239,383600,395373,411259,419996,432810,442820,444901,446196,449109,457283,462772,471429,481612,
#Partially deleted in new
chr18	36297835	36779530	chr18:36297835-36779530	1	+	36297835	36779530	789624	29	165,107,65,68,106,95,112,95,144,239,90,360,75,114,135,51,215,297,884,159,183,120,162,191,193,24,175,162,83,	0,57703,74844,204096,214602,278615,296951,304838,314116,327675,351480,354734,355506,360239,383600,389292,395373,411259,419996,432810,442820,444901,446196,449109,457283,461282,462772,471429,481612,
#Partially deleted in new
chr18	36544550	36780055	chr18:36544550-36780055	1	+	36625529	36779530	789624	17	137,95,112,95,144,239,56,204,159,183,120,162,191,193,175,162,608,	0,31900,50236,58123,67401,80960,113524,173961,186095,196105,198186,199481,202394,210568,216057,224714,234897,
#Partially deleted in new
chr18	36594785	36780055	chr18:36594785-36780055	0	+	36594785	36779530	789624	18	113,95,144,239,135,51,215,297,884,159,183,120,162,191,193,175,162,608,	0,7888,17166,30725,86650,92342,98423,114309,123046,135860,145870,147951,149246,152159,160333,165822,174479,184662,
#Partially deleted in new
chr18	36692975	36717971	chr18:36692975-36717971	0	+	36692975	36692975	8553170	3	448,297,140,	0,16119,24856,
#Partially deleted in new
chr18	36718556	36780055	chr18:36718556-36780055	0	+	36718556	36779530	789624	10	159,159,183,120,162,191,193,175,162,608,	0,12089,22099,24180,25475,28388,36562,42051,50708,60891,
#Partially deleted in new
chr18	36730703	36780055	chr18:36730703-36780055	0	+	36730703	36779462	789624	8	101,183,120,162,191,193,162,608,	0,9952,12033,13328,16241,24415,38561,48744,
#Partially deleted in new
chr18	36777646	36798585	chr18:36777646-36798585	0	-	36780146	36798585	789624	2	2542,137,	0,20802,
#Partially deleted in new
chr18	36780023	36800262	chr18:36780023-36800262	0	-	36781898	36800262	789624	4	165,124,161,65,	0,1775,18425,20174,
#Partially deleted in new
chr18	36780026	36829216	chr18:36780026-36829216	1	-	36780146	36828767	789624	7	162,161,114,129,88,80,534,	0,18422,20171,25347,27820,38867,48656,
#Partially deleted in new
chr18	36782984	36828804	chr18:36782984-36828804	1	-	36783041	36828767	789624	7	147,161,114,129,88,80,122,	0,15464,17213,22389,24862,35909,45698,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	36786484	36829216	chr18:36786484-36829216	1	-	36787068	36828767	789624	5	595,129,88,80,534,	0,18889,21362,32409,42198,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	36786572	36828842	chr18:36786572-36828842	1	-	36786821	36828767	789624	7	507,161,114,129,88,80,160,	0,11876,13625,18801,21274,32321,42110,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	36786572	36818927	chr18:36786572-36818927	0	-	36786943	36818927	789624	6	410,161,114,129,88,34,	0,11876,13625,18801,21274,32321,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	36788692	36828730	chr18:36788692-36828730	0	-	36790145	36828730	789624	7	1459,161,114,129,88,80,48,	0,9756,11505,16681,19154,30201,39990,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	36794105	36829195	chr18:36794105-36829195	3	-	36796804	36828767	789624	7	2945,161,114,129,88,80,513,	0,4343,6092,11268,13741,24788,34577,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	36796071	36828986	chr18:36796071-36828986	1	-	36796804	36828767	789624	6	979,161,114,88,80,304,	0,2377,4126,11775,22822,32611,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	36796071	36828963	chr18:36796071-36828963	1	-	36796804	36828767	789624	7	979,161,114,24,88,80,281,	0,2377,4126,9302,11775,22822,32611,
#Partially deleted in new
chr18	36796925	36807934	chr18:36796925-36807934	0	-	36796925	36807934	789624	4	125,161,114,88,	0,1523,3272,10921,
#Partially deleted in new
chr18	36798017	36828781	chr18:36798017-36828781	1	-	36798421	36828767	789624	6	592,114,129,88,80,99,	0,2180,7356,9829,20876,30665,
#Partially deleted in new
chr18	36798377	36828773	chr18:36798377-36828773	0	-	36823863	36828767	789624	7	232,114,129,88,80,69,91,	0,1820,6996,9469,20516,25425,30305,
#Partially deleted in new
chr18	36798466	36829036	chr18:36798466-36829036	0	-	36821064	36828767	789624	7	143,114,129,88,80,162,354,	0,1731,6907,9380,20427,22501,30216,
#Partially deleted in new
chr18	36800224	36828782	chr18:36800224-36828782	0	-	36823863	36828767	789624	6	87,129,88,99,69,100,	0,5149,7622,18669,23578,28458,
#Partially deleted in new
chr18	36805991	36828988	chr18:36805991-36828988	0	-	36805991	36828767	789624	4	105,88,80,306,	0,1855,12902,22691,
#Partially deleted in new
chr18	36807537	36828787	chr18:36807537-36828787	0	-	36807537	36807537	8553170	3	397,80,105,	0,11356,21145,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	36807846	36829024	chr18:36807846-36829024	0	-	36817708	36828767	789624	4	88,177,80,342,	0,9748,11047,20836,
#Partially deleted in new
chr18	36818512	36829011	chr18:36818512-36829011	0	-	36818512	36818512	8553170	2	461,329,	0,10170,
#Partially deleted in new
chr18	36818893	36828986	chr18:36818893-36828986	0	-	36818893	36828767	789624	2	44,304,	0,9789,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr18	36829105	37231518	chr18:36829105-37231518	0	+	36829138	36885565	789624	11	91,36,143,116,128,656,182,109,101,91,145,	0,5214,6128,56451,130202,237784,331094,343867,392911,400463,402268,
#Partially deleted in new
chr18	36829116	37225324	chr18:36829116-37225324	3	+	36829138	37222227	789624	10	80,36,143,95,116,128,656,182,109,3308,	0,5203,6117,15091,56440,130191,237773,331083,343856,392900,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	36829128	36886404	chr18:36829128-36886404	1	+	36829138	36885716	789624	5	68,36,143,95,848,	0,5191,6105,15079,56428,
#Partially deleted in new
chr18	36829130	37222307	chr18:36829130-37222307	0	+	36829138	36885565	789624	10	66,36,143,116,128,656,108,182,109,291,	0,5189,6103,56426,130177,237759,254994,331069,343842,392886,
#Partially deleted in new
chr18	36829239	37223678	chr18:36829239-37223678	0	+	36829239	37222227	789624	9	200,95,116,128,656,108,182,109,1662,	0,14968,56317,130068,237650,254885,330960,343733,392777,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr18	36832673	37229885	chr18:36832673-37229885	1	+	36834273	37222227	789624	11	715,153,143,95,116,128,656,182,109,3267,317,	0,1529,2560,11534,52883,126634,234216,327526,340299,389343,396895,
#Partially deleted in new
chr18	36901945	36923814	chr18:36901945-36923814	3	-	36901945	36901945	789624	4	422,78,147,41,	0,1665,19115,21828,
#Partially deleted in new
chr18	36923904	37067201	chr18:36923904-37067201	0	+	37067165	37067201	789624	3	57,127,312,	0,1011,142985,
#Partially deleted in new
chr18	36923910	36955852	chr18:36923910-36955852	0	+	36923910	36923910	8553170	5	51,131,269,74,38,	0,1001,22338,30520,31904,
#Partially deleted in new
chr18	36923939	37222302	chr18:36923939-37222302	1	+	37067165	37193651	789624	9	18,131,269,656,108,182,109,104,286,	0,972,22309,142950,160185,236260,249033,269651,298077,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	37066865	37075648	chr18:37066865-37075648	1	+	37067165	37074761	789624	2	680,897,	0,7886,
#Partially deleted in new
chr18	37067339	37084425	chr18:37067339-37084425	0	+	37067339	37067339	8553170	2	206,301,	0,16785,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	37229578	37232172	chr18:37229578-37232172	0	+	37229578	37229578	8553170	1	2594,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	37234118	37236242	chr18:37234118-37236242	3	-	37234118	37234118	8553170	1	2124,	0,
#Partially deleted in new
chr18	37243046	37565641	chr18:37243046-37565641	1	-	37253810	37565641	0	12	2151,172,84,66,150,148,144,80,129,49,83,286,	0,10720,21627,23486,27721,29969,31264,31758,32068,78786,242478,322309,
#Partially deleted in new
chr18	37243046	37566037	chr18:37243046-37566037	3	-	37253810	37565641	0	13	2151,172,84,84,66,150,148,144,80,129,79,83,682,	0,10720,16134,21627,23486,27721,29969,31264,31758,32068,78756,242478,322309,
#Partially deleted in new
chr18	37243046	37270920	chr18:37243046-37270920	0	-	37253810	37270920	789624	4	2151,172,66,153,	0,10720,23486,27721,
#Partially deleted in new
chr18	37243046	37273043	chr18:37243046-37273043	0	-	37253810	37273043	789624	6	2151,172,84,66,150,28,	0,10720,21627,23486,27721,29969,
#Partially deleted in new
chr18	37243046	37565748	chr18:37243046-37565748	1	-	37253810	37565641	0	13	2151,172,84,84,63,150,148,144,80,126,79,83,393,	0,10720,16134,21627,23489,27721,29969,31264,31758,32068,78756,242478,322309,
#Deleted in new
chr18	37243775	37247506	chr18:37243775-37247506	3	+	37243775	37243775	8553170	2	84,617,	0,3114,
#Partially deleted in new
chr18	37244613	37485576	chr18:37244613-37485576	0	-	37274306	37321881	789624	10	584,172,84,84,66,150,1869,126,49,52,	0,9153,14567,20060,21919,26154,28402,30501,77219,240911,
#Deleted in new
chr18	37244833	37253981	chr18:37244833-37253981	0	-	37244833	37244833	8553170	2	364,215,	0,8933,
#Partially deleted in new
chr18	37244967	37565765	chr18:37244967-37565765	1	-	37253810	37565641	0	13	230,172,84,84,66,150,145,144,80,126,79,83,410,	0,8799,14213,19706,21565,25800,28048,29343,29837,30147,76835,240557,320388,
#Partially deleted in new
chr18	37244967	37565748	chr18:37244967-37565748	1	-	37253810	37565641	789624	13	230,172,84,84,66,150,148,141,80,126,79,83,393,	0,8799,14213,19706,21565,25800,28048,29346,29837,30147,76835,240557,320388,
#Partially deleted in new
chr18	37244979	37565827	chr18:37244979-37565827	1	-	37253810	37565641	0	13	218,172,84,84,66,150,145,144,80,129,79,83,472,	0,8787,14201,19694,21553,25788,28036,29331,29825,30135,76823,240545,320376,
#Partially deleted in new
chr18	37245003	37264754	chr18:37245003-37264754	0	-	37253810	37264754	789624	4	194,85,172,81,	0,2182,8763,19670,
#Partially deleted in new
chr18	37253810	37565641	chr18:37253810-37565641	1	-	37253810	37565641	0	12	128,84,84,66,150,148,144,80,129,79,83,286,	0,5370,10863,12722,16957,19205,20500,20994,21304,67992,231714,311545,
#Partially deleted in new
chr18	37253837	37273043	chr18:37253837-37273043	0	-	37253837	37273031	789624	5	101,81,66,150,28,	0,10836,12695,16930,19178,
#Partially deleted in new
chr18	37253854	37273043	chr18:37253854-37273043	0	-	37253854	37273031	789624	6	84,144,84,66,150,28,	0,5266,10819,12678,16913,19161,
#Partially deleted in new
chr18	37259043	37565651	chr18:37259043-37565651	1	-	37259112	37565641	789624	11	221,81,66,150,148,144,80,126,49,83,296,	0,5630,7489,11724,13972,15267,15761,16071,62789,226481,306312,
#Partially deleted in new
chr18	37259179	37273043	chr18:37259179-37273043	0	-	37259179	37273031	789624	5	85,84,63,150,28,	0,5494,7356,11588,13836,
#Partially deleted in new
chr18	37266216	37273158	chr18:37266216-37273158	0	-	37266216	37266216	8553170	3	382,150,143,	0,4551,6799,
#Partially deleted in new
chr18	37266532	37273584	chr18:37266532-37273584	0	-	37266532	37266532	8553170	4	61,150,148,52,	0,4235,6483,7000,
#Partially deleted in new
chr18	37273052	37565748	chr18:37273052-37565748	0	-	37273052	37565641	789624	7	111,144,80,129,49,83,393,	0,1258,1752,2062,48780,212472,292303,
#Partially deleted in new
chr18	37273100	37485857	chr18:37273100-37485857	0	-	37273100	37321881	789624	7	63,144,80,126,49,83,132,	0,1210,1704,2014,48732,212424,212625,
#Partially deleted in new
chr18	37273108	37485747	chr18:37273108-37485747	0	-	37273108	37321881	789624	7	55,144,80,129,79,83,22,	0,1202,1696,2006,48694,212416,212617,
#Partially deleted in new
chr18	37273705	37276572	chr18:37273705-37276572	3	+	37273705	37273705	8553170	5	121,84,169,39,51,	0,1939,2107,2446,2816,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	37274459	37276400	chr18:37274459-37276400	1	+	37274459	37274459	789624	3	136,84,249,	0,1185,1692,
#Partially deleted in new
chr18	37274864	37486034	chr18:37274864-37486034	0	-	37274864	37321881	789624	5	20,129,52,83,45,	0,250,46965,210660,211125,
#Deleted in new
chr18	37305294	37306333	chr18:37305294-37306333	3	-	37305294	37305294	8553170	1	1039,	0,
#Deleted in new
chr18	37473329	37473977	chr18:37473329-37473977	3	-	37473329	37473329	8553170	1	648,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	37528966	37565608	chr18:37528966-37565608	0	-	37528966	37528966	8553170	2	222,253,	0,36389,
#Partially deleted in new
chr18	37565280	37762131	chr18:37565280-37762131	3	+	37565280	37565280	8553170	9	110,72,224,87,262,402,210,86,1264,	0,160563,165883,168402,177414,185484,188196,189499,195587,
#Deleted in new
chr18	37657134	37657215	chr18:37657134-37657215	3	+	37657134	37657134	5263520	1	81,	0,
#Deleted in new
chr18	37672688	37673176	chr18:37672688-37673176	7	+	37672688	37672688	16724991	1	488,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	38655208	38670994	chr18:38655208-38670994	3	-	38655208	38655208	8553170	4	180,78,78,47,	0,4040,5529,15739,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	38655218	38660775	chr18:38655218-38660775	1	-	38655218	38655218	8553170	2	425,38,	0,5519,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	38659248	38687998	chr18:38659248-38687998	1	-	38659248	38659248	8553170	3	78,255,66,	0,11629,28684,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	39016046	39016344	chr18:39016046-39016344	3	-	39016046	39016046	8553170	1	298,	0,
#Deleted in new
chr18	39034006	39034110	chr18:39034006-39034110	3	+	39034006	39034006	8553170	1	104,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	39206923	39800318	chr18:39206923-39800318	3	-	39206923	39206923	8553170	4	1866,158,32,250,	0,328534,544405,593145,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	39207626	39340638	chr18:39207626-39340638	0	-	39207626	39207626	8553170	4	1163,142,186,148,	0,6501,120139,132864,
#Partially deleted in new
chr18	39314239	39328008	chr18:39314239-39328008	0	+	39314239	39314239	8553170	3	80,229,186,	0,12654,13583,
#Partially deleted in new
chr18	39314282	39328005	chr18:39314282-39328005	3	+	39314282	39314282	8553170	4	37,114,229,183,	0,3535,12611,13540,
#Deleted in new
chr18	39334871	39335672	chr18:39334871-39335672	7	-	39334871	39334871	16724991	1	801,	0,
#Deleted in new
chr18	39622122	39622175	chr18:39622122-39622175	3	-	39622122	39622122	5263520	1	53,	0,
#Deleted in new
chr18	39676718	39676777	chr18:39676718-39676777	3	-	39676718	39676718	5263520	1	59,	0,
#Deleted in new
chr18	39676720	39676779	chr18:39676720-39676779	3	+	39676720	39676720	5263520	1	59,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	39678519	39678622	chr18:39678519-39678622	3	-	39678519	39678519	8553170	1	103,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	39841808	39896298	chr18:39841808-39896298	0	+	39841808	39841808	8553170	7	104,96,161,143,78,5621,1514,	0,22244,23431,23960,27079,29021,52976,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	39841808	39889993	chr18:39841808-39889993	1	+	39841808	39841808	8553170	9	104,96,161,143,78,139,63,181,3642,	0,22244,23431,23960,27079,29021,34579,40612,44543,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	39841808	39896298	chr18:39841808-39896298	3	+	39841808	39841808	8553170	8	104,96,143,246,78,5112,63,1514,	0,22244,23960,25320,27079,29021,34579,52976,
#Deleted in new
chr18	40062902	40066471	chr18:40062902-40066471	3	-	40062902	40062902	8553170	1	3569,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	40066285	40099233	chr18:40066285-40099233	3	+	40066285	40066285	789624	4	822,61,121,222,	0,4073,16366,32726,
#Partially deleted in new
chr18	40143925	40144504	chr18:40143925-40144504	7	-	40143925	40143925	16724991	2	371,138,	0,441,
#Partially deleted in new
chr18	41465782	41481068	chr18:41465782-41481068	1	-	41465782	41465782	8553170	2	1998,313,	0,14973,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	41480270	41520597	chr18:41480270-41520597	1	-	41480270	41480270	789624	6	997,76,133,157,136,214,	0,1611,2174,20849,36149,40113,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	41501003	41520594	chr18:41501003-41520594	0	-	41501003	41501003	8553170	3	273,136,211,	0,15416,19380,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	41513687	41520677	chr18:41513687-41520677	0	-	41513687	41513687	8553170	3	115,136,294,	0,2732,6696,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	41516141	41520596	chr18:41516141-41520596	0	-	41516141	41516141	8553170	2	414,213,	0,4242,
#Deleted in new
chr18	41789161	41789395	chr18:41789161-41789395	7	-	41789161	41789161	16724991	1	234,	0,
#Deleted in new
chr18	41819052	41819421	chr18:41819052-41819421	7	+	41819052	41819052	16724991	1	369,	0,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr18	41955205	42087830	chr18:41955205-42087830	3	+	41955291	42081137	0	25	154,189,144,130,87,96,72,105,93,186,155,91,68,106,117,132,129,70,65,85,75,169,91,126,6708,	0,2364,7283,15121,32606,35253,38064,40684,41432,49150,58236,60270,65432,72237,74119,78620,82486,83575,85471,88527,94325,102677,109534,112182,125917,
#Partially deleted in new
chr18	41955233	42070518	chr18:41955233-42070518	1	+	41955291	42070518	789624	25	126,189,144,130,87,96,72,105,93,186,155,91,72,105,117,132,129,70,65,85,75,169,91,126,12,	0,2336,7255,15093,32578,35225,38036,40656,41404,49122,58208,60242,65404,72210,74091,78592,82458,83547,85443,88499,94297,102649,109506,112154,115273,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr18	41955253	42087830	chr18:41955253-42087830	1	+	41955291	42081137	789624	24	106,144,130,87,96,72,105,93,186,155,91,68,106,117,132,129,70,65,85,75,169,91,126,6708,	0,7235,15073,32558,35205,38016,40636,41384,49102,58188,60222,65384,72189,74071,78572,82438,83527,85423,88479,94277,102629,109486,112134,125869,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	41955255	41971443	chr18:41955255-41971443	1	+	41955291	41970531	789624	4	104,189,144,1117,	0,2314,7233,15071,
#Deleted in new
chr18	41955261	41957758	chr18:41955261-41957758	0	+	41955261	41955261	8553170	2	98,70,	0,2427,
#Partially deleted in new
chr18	41955417	41970499	chr18:41955417-41970499	0	+	41955417	41970499	789624	4	27,189,144,173,	0,2152,7071,14909,
#Partially deleted in new
chr18	41957638	41987875	chr18:41957638-41987875	0	+	41957638	41984888	789624	5	120,144,130,228,64,	0,4850,12688,27241,30173,
#Partially deleted in new
chr18	41957666	41990602	chr18:41957666-41990602	0	+	41957666	41957666	8553170	5	92,144,130,87,144,	0,4822,12660,30145,32792,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr18	42025330	42081479	chr18:42025330-42081479	0	+	42025330	42025330	8553170	12	2218,117,132,129,70,65,85,75,169,91,126,357,	0,3994,8495,12361,13450,15346,18402,24200,32552,39409,42057,55792,
#Partially deleted in new
chr18	42025781	42037817	chr18:42025781-42037817	0	+	42025781	42025781	8553170	5	158,106,117,132,126,	0,1661,3543,8044,11910,
#Partially deleted in new
chr18	42033841	42049683	chr18:42033841-42049683	0	+	42033841	42049616	789624	6	116,129,70,65,85,153,	0,3850,4939,6835,9891,15689,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	42037749	42051313	chr18:42037749-42051313	1	+	42037811	42049616	789624	5	71,70,65,85,1783,	0,1031,2927,5983,11781,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	42037771	42049975	chr18:42037771-42049975	1	+	42037811	42049875	789624	6	49,70,65,85,75,108,	0,1009,2905,5961,11759,12096,
#Partially deleted in new
chr18	42049291	42081184	chr18:42049291-42081184	0	+	42049291	42049291	8553170	4	314,91,126,62,	0,15448,18096,31831,
#Deleted in new
chr18	42052704	42053030	chr18:42052704-42053030	3	+	42052704	42052704	8553170	1	326,	0,
#Partially deleted in new
chr18	42057834	42081421	chr18:42057834-42081421	0	+	42057834	42057834	8553170	4	217,91,126,299,	0,6905,9553,23288,
#Partially deleted in new
chr18	42064694	42081396	chr18:42064694-42081396	0	+	42064694	42064694	8553170	3	136,126,274,	0,2693,16428,
#Deleted in new
chr18	42089311	42089752	chr18:42089311-42089752	7	+	42089311	42089311	16724991	1	441,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	42186667	42518953	chr18:42186667-42518953	1	+	42186667	42186667	8553170	5	95,144,167,83,2835,	0,39296,267264,268239,329451,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	42186667	42459675	chr18:42186667-42459675	1	+	42186667	42186667	789624	8	95,163,144,91,220,167,83,2413,	0,25696,39296,102836,148416,267264,268239,270595,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	42186669	42462185	chr18:42186669-42462185	3	+	42186669	42186669	789624	7	93,163,144,91,167,83,351,	0,25694,39294,102834,267262,268237,275165,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	42186684	42516937	chr18:42186684-42516937	1	+	42186684	42186684	8553170	5	78,144,167,83,819,	0,39279,267247,268222,329434,
#Partially deleted in new
chr18	42225963	42233327	chr18:42225963-42233327	0	+	42225963	42225963	8553170	2	144,323,	0,7041,
#Deleted in new
chr18	42270588	42270715	chr18:42270588-42270715	7	+	42270588	42270588	16724991	1	127,	0,
#Partially deleted in new
chr18	42743226	43115691	chr18:42743226-43115691	1	-	42743492	43115519	789624	5	494,192,74,57,275,	0,180345,230847,290584,372190,
#Partially deleted in new
chr18	42743226	43115691	chr18:42743226-43115691	3	-	42920724	43115519	789624	6	494,64,192,74,57,275,	0,177470,180345,230847,290584,372190,
#Partially deleted in new
chr18	42743468	43115649	chr18:42743468-43115649	1	-	42743698	43115519	789624	6	252,192,62,74,57,233,	0,180103,205518,230605,290342,371948,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	42844614	43115676	chr18:42844614-43115676	0	-	42903833	43115519	8553170	7	555,65,192,62,74,57,260,	0,59164,78957,104372,129459,189196,270802,
#Partially deleted in new
chr18	42923364	42974095	chr18:42923364-42974095	0	-	42923364	42923364	8553170	2	399,22,	0,50709,
#Deleted in new
chr18	43267877	43277650	chr18:43267877-43277650	3	-	43270340	43277281	0	4	2771,121,815,403,	0,3834,5702,9370,
#Deleted in new
chr18	43269666	43277535	chr18:43269666-43277535	0	-	43269666	43269666	8553170	2	895,247,	0,7622,
#Deleted in new
chr18	43270008	43277490	chr18:43270008-43277490	1	-	43270340	43277281	0	4	640,121,761,243,	0,1703,3571,7239,
#Deleted in new
chr18	43270180	43277499	chr18:43270180-43277499	0	-	43270180	43270180	8553170	3	468,121,157,	0,1531,7162,
#Deleted in new
chr18	43270499	43277490	chr18:43270499-43277490	0	-	43270499	43273618	789624	4	149,121,44,251,	0,1212,3080,6740,
#Deleted in new
chr18	43270551	43272151	chr18:43270551-43272151	0	-	43270551	43270551	8553170	2	97,440,	0,1160,
#Deleted in new
chr18	43271731	43277376	chr18:43271731-43277376	0	-	43271731	43274394	789624	4	101,233,97,129,	0,1848,2566,5516,
#Deleted in new
chr18	43274032	43277490	chr18:43274032-43277490	0	-	43274032	43274032	8553170	2	362,148,	0,3310,
#Deleted in new
chr18	44039470	44040140	chr18:44039470-44040140	7	+	44039470	44039470	16724991	1	670,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	44214970	44342315	chr18:44214970-44342315	3	+	44214970	44214970	8553170	4	94,71,185,593,	0,71486,126364,126752,
#Deleted in new
chr18	44320799	44322257	chr18:44320799-44322257	7	-	44320799	44320799	16724991	1	1458,	0,
#Partially deleted in new
chr18	44323435	44531697	chr18:44323435-44531697	3	-	44323435	44323435	789624	5	1169,277,236,144,242,	0,1716,2811,194789,208020,
#Partially deleted in new
chr18	44326445	44531655	chr18:44326445-44531655	0	-	44326445	44326445	8553170	4	37,199,139,200,	0,46839,191779,205010,
#Deleted in new
chr18	44522365	44523074	chr18:44522365-44523074	7	+	44522365	44522365	16724991	1	709,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	44676926	44679717	chr18:44676926-44679717	3	-	44676926	44676926	8553170	2	1963,102,	0,2689,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	44680172	44877414	chr18:44680172-44877414	1	+	44701346	44876753	789624	4	223,658,54,850,	0,21002,189057,196392,
#Partially deleted in new
chr18	44680886	45068510	chr18:44680886-45068510	3	+	44701346	45063698	8553170	6	135,658,54,3460,171,5432,	0,20288,188343,268994,357598,382192,
#Partially deleted in new
chr18	44680897	45068510	chr18:44680897-45068510	1	+	44701346	45063698	789624	6	124,658,54,3460,171,5432,	0,20277,188332,268983,357587,382181,
#Deleted in new
chr18	44697163	44701757	chr18:44697163-44701757	0	+	44701346	44701757	789624	2	179,583,	0,4011,
#Partially deleted in new
chr18	44701337	44872146	chr18:44701337-44872146	1	+	44701346	44869328	789624	2	495,2917,	0,167892,
#Deleted in new
chr18	44732574	44733315	chr18:44732574-44733315	3	+	44732574	44732574	8553170	1	741,	0,
#Deleted in new
chr18	44970081	44970166	chr18:44970081-44970166	3	-	44970081	44970081	5263520	1	85,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	44986108	44989203	chr18:44986108-44989203	3	+	44986108	44986108	8553170	1	3095,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	45130564	45181347	chr18:45130564-45181347	0	-	45130564	45130564	8553170	4	199,127,93,197,	0,19575,49321,50586,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	45149916	45181379	chr18:45149916-45181379	3	-	45149916	45149916	8553170	7	68,127,98,210,90,93,379,	0,223,17804,18692,19515,29969,31084,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	45168599	45181114	chr18:45168599-45181114	0	-	45168599	45168599	8553170	4	219,44,93,114,	0,496,11286,12401,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr18	45212994	45682975	chr18:45212994-45682975	3	+	45624664	45682519	789624	21	197,90,184,181,190,129,193,148,135,50,175,123,83,160,190,129,193,148,135,50,657,	0,270238,411636,412688,413963,419355,423995,426751,428214,430137,430991,450790,453142,453940,454838,455354,456311,459905,460688,465980,469324,
#Partially deleted in new
chr18	45423763	45435297	chr18:45423763-45435297	0	-	45423763	45423763	8553170	2	393,99,	0,11435,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	45424109	45483218	chr18:45424109-45483218	3	-	45424109	45424109	8553170	6	47,127,76,85,111,48,	0,11089,12533,23146,58387,59061,
#Partially deleted in new
chr18	45438173	45447346	chr18:45438173-45447346	1	-	45438173	45438173	8553170	3	172,96,91,	0,2203,9082,
#Partially deleted in new
chr18	45438185	45447623	chr18:45438185-45447623	1	-	45438185	45438185	8553170	2	160,368,	0,9070,
#Partially deleted in new
chr18	45483344	45529855	chr18:45483344-45529855	1	+	45483344	45483344	8553170	2	112,1999,	0,44512,
#Partially deleted in new
chr18	45483344	45528306	chr18:45483344-45528306	2	+	45483344	45483344	8553170	3	112,68,450,	0,8717,44512,
#Partially deleted in new
chr18	45483359	45493269	chr18:45483359-45493269	1	+	45483359	45483359	8553170	4	97,39,68,217,	0,6547,8702,9693,
#Deleted in new
chr18	45483369	45485316	chr18:45483369-45485316	0	+	45483369	45483369	8553170	2	87,172,	0,1775,
#Partially deleted in new
chr18	45491580	45503824	chr18:45491580-45503824	3	-	45491580	45491580	8553170	3	546,138,51,	0,2501,12193,
#Partially deleted in new
chr18	45507201	45550183	chr18:45507201-45550183	3	+	45507201	45507201	8553170	4	213,159,164,190,	0,8241,35018,42792,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr18	45614800	45683686	chr18:45614800-45683686	1	+	45624664	45682519	789624	20	782,184,181,190,129,193,148,135,50,175,123,83,160,190,129,193,148,135,50,1368,	0,9830,10882,12157,17549,22189,24945,26408,28331,29185,48984,51336,52134,53032,53548,54505,58099,58882,64174,67518,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr18	45615480	45644408	chr18:45615480-45644408	0	+	45624664	45634879	789624	11	66,184,181,190,129,128,95,148,135,50,423,	0,9150,10202,11477,16869,19341,21607,24265,25728,27651,28505,
#Deleted in new
chr18	45646152	45647937	chr18:45646152-45647937	3	+	45646152	45646152	8553170	1	1785,	0,
#Partially deleted in new
chr18	45687024	45725019	chr18:45687024-45725019	0	+	45687024	45687024	8553170	4	193,214,540,70,	0,34972,36709,37925,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	45724126	45752520	chr18:45724126-45752520	3	+	45730320	45749951	789624	10	147,64,172,190,129,193,148,135,50,2743,	0,823,6173,6888,10147,12329,15036,15401,24249,25651,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	45724126	45752520	chr18:45724126-45752520	1	+	45730320	45749838	789624	9	147,64,172,190,129,193,135,50,2743,	0,823,6173,6888,10147,12329,15401,24249,25651,
#Partially deleted in new
chr18	45724149	45734332	chr18:45724149-45734332	0	+	45731178	45734332	789624	5	124,64,135,190,59,	0,800,5836,6865,10124,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	45724178	45751176	chr18:45724178-45751176	1	+	45727401	45749951	789624	9	95,64,158,129,193,148,135,50,1399,	0,771,3082,10095,12277,14984,15349,24197,25599,
#Partially deleted in new
chr18	45724183	45750168	chr18:45724183-45750168	1	+	45731178	45749951	789624	9	90,64,190,129,193,148,135,50,391,	0,766,6831,10090,12272,14979,15344,24192,25594,
#Partially deleted in new
chr18	45724183	45750002	chr18:45724183-45750002	1	+	45727271	45749951	789624	11	90,64,158,172,190,129,193,148,135,50,225,	0,766,3077,6116,6831,10090,12272,14979,15344,24192,25594,
#Partially deleted in new
chr18	45724183	45750016	chr18:45724183-45750016	1	+	45734328	45749951	789624	8	90,64,129,193,148,135,50,239,	0,766,10090,12272,14979,15344,24192,25594,
#Partially deleted in new
chr18	45724183	45750015	chr18:45724183-45750015	1	+	45730320	45749951	789624	11	90,64,87,172,190,129,193,148,135,50,238,	0,766,3148,6116,6831,10090,12272,14979,15344,24192,25594,
#Partially deleted in new
chr18	45724183	45750008	chr18:45724183-45750008	1	+	45734328	45749951	789624	7	90,129,193,148,135,50,231,	0,10090,12272,14979,15344,24192,25594,
#Partially deleted in new
chr18	45724195	45750337	chr18:45724195-45750337	0	+	45727271	45739169	789624	10	78,64,158,172,190,129,148,135,50,560,	0,754,3065,6104,6819,10078,14967,15332,24180,25582,
#Partially deleted in new
chr18	45724890	45734340	chr18:45724890-45734340	0	+	45730320	45734340	789624	4	123,172,190,67,	0,5409,6124,9383,
#Partially deleted in new
chr18	45726724	45750330	chr18:45726724-45750330	1	+	45727271	45749951	789624	9	694,172,190,129,193,148,135,50,553,	0,3575,4290,7549,9731,12438,12803,21651,23053,
#Partially deleted in new
chr18	45727373	45739166	chr18:45727373-45739166	0	+	45731178	45739166	789624	5	45,190,129,193,4,	0,3641,6900,9082,11789,
#Partially deleted in new
chr18	45729028	45750335	chr18:45729028-45750335	1	+	45730320	45749951	789624	8	1443,190,129,193,148,135,50,558,	0,1986,5245,7427,10134,10499,19347,20749,
#Partially deleted in new
chr18	45730320	45749951	chr18:45730320-45749951	1	+	45730320	45749838	789624	7	151,190,129,193,135,50,174,	0,694,3953,6135,9207,18055,19457,
#Partially deleted in new
chr18	45731140	45752520	chr18:45731140-45752520	0	+	45731140	45752262	789624	5	64,129,193,50,343,	0,3133,5315,17235,21037,
#Partially deleted in new
chr18	45731327	45747215	chr18:45731327-45747215	1	-	45731327	45731327	8553170	3	328,129,90,	0,6138,15798,
#Partially deleted in new
chr18	45734116	45739248	chr18:45734116-45739248	0	+	45734116	45734116	8553170	3	286,193,86,	0,2339,5046,
#Partially deleted in new
chr18	45736552	45739860	chr18:45736552-45739860	0	+	45736552	45736552	8553170	3	96,148,333,	0,2610,2975,
#Partially deleted in new
chr18	45739501	45750120	chr18:45739501-45750120	0	+	45739501	45739501	8553170	3	161,50,343,	0,8874,10276,
#Deleted in new
chr18	45788529	45788670	chr18:45788529-45788670	7	+	45788529	45788529	16724991	1	141,	0,
#Partially deleted in new
chr18	45825511	45842556	chr18:45825511-45842556	3	+	45825728	45842187	789624	6	269,60,384,378,31,451,	0,11517,12001,13206,14699,16594,
#Partially deleted in new
chr18	45829087	45842556	chr18:45829087-45842556	0	+	45829087	45829087	8553170	5	96,60,378,31,451,	0,7941,9630,11123,13018,
#Partially deleted in new
chr18	45829090	45842224	chr18:45829090-45842224	1	+	45837851	45842187	789624	6	93,60,373,378,31,119,	0,7938,8422,9627,11120,13015,
#Partially deleted in new
chr18	45837840	45841094	chr18:45837840-45841094	0	+	45837840	45840943	789624	4	56,378,31,209,	0,877,2370,3045,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	45838521	45844080	chr18:45838521-45844080	0	+	45838521	45838521	8553170	3	574,31,1975,	0,1689,3584,
#Boundary problem: need 44, got 0, diff 44, mapped 0.0
chr18	45847608	45967322	chr18:45847608-45967322	1	-	45852466	45967239	789624	44	5041,115,216,217,243,145,210,186,176,107,73,202,149,214,195,157,143,163,172,145,124,222,167,123,111,198,145,141,260,120,165,141,155,158,156,151,115,106,74,108,137,244,945,146,	0,7964,10244,10957,12495,18006,19189,19954,22958,28627,30767,31404,32466,34665,37008,40142,42189,51795,53387,56364,60349,62912,64681,66097,67902,68400,68829,70070,74732,75659,78129,81260,83067,87200,91991,95552,96396,99054,100894,101875,103493,104791,106785,119568,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	45847608	45867750	chr18:45847608-45867750	0	-	45852466	45867750	789624	8	5041,115,216,217,243,145,210,188,	0,7964,10244,10957,12495,18006,19189,19954,
#Boundary problem: need 44, got 0, diff 44, mapped 0.0
chr18	45847608	45967339	chr18:45847608-45967339	3	-	45852466	45967239	789624	44	5041,115,216,217,243,145,210,186,176,107,73,202,149,214,195,157,143,163,172,145,124,222,167,123,111,198,145,141,260,120,165,141,155,158,156,151,115,106,74,108,137,244,945,163,	0,7964,10244,10957,12495,18006,19189,19954,22958,28627,30767,31404,32466,34665,37008,40142,42189,51795,53387,56364,60349,62912,64681,66097,67902,68400,68829,70070,74732,75659,78129,81260,83067,87200,91991,95552,96396,99054,100894,101875,103493,104791,106785,119568,
#Partially deleted in new
chr18	45855352	45858651	chr18:45855352-45858651	0	-	45855352	45855352	8553170	3	335,216,86,	0,2500,3213,
#Partially deleted in new
chr18	45857725	45917696	chr18:45857725-45917696	0	-	45857725	45857725	8553170	26	343,217,243,145,210,186,176,107,73,202,149,214,195,157,143,163,172,145,124,222,167,123,111,198,145,18,	0,840,2378,7889,9072,9837,12841,18510,20650,21287,22349,24548,26891,30025,32072,41678,43270,46247,50232,52795,54564,55980,57785,58283,58712,59953,
#Partially deleted in new
chr18	45857821	45916454	chr18:45857821-45916454	0	-	45907232	45916446	789624	26	247,217,243,145,210,186,176,107,73,202,149,214,195,157,143,163,172,145,126,124,222,167,123,111,198,17,	0,744,2282,7793,8976,9741,12745,18414,20554,21191,22253,24452,26795,29929,31976,41582,43174,46151,49342,50136,52699,54468,55884,57689,58187,58616,
#Partially deleted in new
chr18	45857821	45916454	chr18:45857821-45916454	0	-	45882386	45916446	789624	23	247,217,243,145,210,186,73,202,149,158,195,157,143,163,172,145,124,222,167,123,111,198,17,	0,744,2282,7793,8976,9741,20554,21191,22253,24452,26795,29929,31976,41582,43174,46151,50136,52699,54468,55884,57689,58187,58616,
#Partially deleted in new
chr18	45857821	45916454	chr18:45857821-45916454	0	-	45870738	45916446	789624	24	247,217,243,145,210,186,176,73,202,149,214,195,157,143,163,172,145,124,222,167,123,111,198,17,	0,744,2282,7793,8976,9741,12745,20554,21191,22253,24452,26795,29929,31976,41582,43174,46151,50136,52699,54468,55884,57689,58187,58616,
#Partially deleted in new
chr18	45887850	45890191	chr18:45887850-45890191	0	-	45887850	45887850	8553170	2	57,394,	0,1947,
#Partially deleted in new
chr18	45907864	45967274	chr18:45907864-45967274	0	-	45907864	45907864	8553170	24	217,222,167,123,111,198,145,141,260,120,165,141,155,158,156,151,115,106,74,108,137,244,945,98,	0,2656,4425,5841,7646,8144,8573,9814,14476,15403,17873,21004,22811,26944,31735,35296,36140,38798,40638,41619,43237,44535,46529,59312,
#Deleted in new
chr18	45916037	45916805	chr18:45916037-45916805	0	-	45916037	45916037	8553170	2	169,368,	0,400,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr18	45983535	46072260	chr18:45983535-46072260	3	-	45988709	46072188	789624	15	1915,58,35,82,97,99,80,46,99,63,107,35,78,101,105,	0,5166,7186,8366,8570,10069,14213,15258,15900,21933,27645,32367,41073,56411,88620,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr18	45983535	46072257	chr18:45983535-46072257	1	-	45985427	46072188	789624	14	1915,58,35,82,99,80,46,99,63,107,35,78,101,102,	0,5166,7186,8366,10069,14213,15258,15900,21933,27645,32367,41073,56411,88620,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	45984232	46040287	chr18:45984232-46040287	0	-	45984232	45984232	8553170	9	366,46,99,63,107,35,78,101,128,	0,14561,15203,21236,26948,31670,40376,55714,55927,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	45989652	45989945	chr18:45989652-45989945	3	-	45989652	45989652	8553170	1	293,	0,
#Partially deleted in new
chr18	45991935	45993974	chr18:45991935-45993974	0	-	45991935	45991935	8553170	3	48,97,370,	0,170,1669,
#Partially deleted in new
chr18	45999458	46016225	chr18:45999458-46016225	0	-	45999458	45999458	8553170	4	76,63,107,323,	0,6010,11722,16444,
#Partially deleted in new
chr18	46010759	46072272	chr18:46010759-46072272	0	-	46010759	46010759	8553170	5	528,35,78,101,117,	0,5143,13849,29187,61396,
#Deleted in new
chr18	46028305	46029829	chr18:46028305-46029829	7	+	46028305	46028305	16724991	1	1524,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	46077003	46077099	chr18:46077003-46077099	3	-	46077003	46077003	8553170	1	96,	0,
#Duplicated in new
chr18	46080247	46098353	chr18:46080247-46098353	1	-	46084281	46098231	789624	12	4116,151,145,108,225,152,149,167,174,170,79,182,	0,4256,5865,6139,6760,7093,7861,9318,9575,11434,14805,17924,
#Partially deleted in new
chr18	46084143	46104233	chr18:46084143-46104233	3	-	46084281	46098231	789624	13	220,151,145,108,225,152,149,167,174,170,79,108,97,	0,360,1969,2243,2864,3197,3965,5422,5679,7538,10909,14028,19993,
#Partially deleted in new
chr18	46084143	46098353	chr18:46084143-46098353	1	-	46084281	46091840	789624	12	220,151,145,108,225,152,149,167,174,170,79,518,	0,360,1969,2243,2864,3197,3965,5422,5679,7538,10909,13692,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	46084149	46088696	chr18:46084149-46088696	0	-	46084149	46084149	8553170	1	4547,	0,
#Partially deleted in new
chr18	46084149	46098315	chr18:46084149-46098315	0	-	46097958	46098231	789624	12	214,151,145,108,225,152,149,167,174,170,79,480,	0,354,1963,2237,2858,3191,3959,5416,5673,7532,10903,13686,
#Partially deleted in new
chr18	46084149	46098295	chr18:46084149-46098295	0	-	46095014	46098231	789624	12	214,151,145,108,225,152,149,167,174,170,152,124,	0,354,1963,2237,2858,3191,3959,5416,5673,7532,10830,14022,
#Partially deleted in new
chr18	46084149	46098296	chr18:46084149-46098296	1	-	46084281	46098231	789624	12	214,151,145,108,225,152,149,167,108,170,79,125,	0,354,1963,2237,2858,3191,3959,5416,5739,7532,10903,14022,
#Partially deleted in new
chr18	46084426	46086584	chr18:46084426-46086584	0	-	46084426	46084426	8553170	3	228,145,198,	0,1686,1960,
#Partially deleted in new
chr18	46086126	46098285	chr18:46086126-46098285	0	-	46087056	46098231	789624	6	131,108,57,87,79,114,	0,260,881,5638,8926,12045,
#Partially deleted in new
chr18	46087426	46098295	chr18:46087426-46098295	0	-	46087426	46098231	789624	6	66,149,167,77,79,124,	0,682,2139,2396,7626,10745,
#Partially deleted in new
chr18	46088135	46104334	chr18:46088135-46104334	0	-	46088135	46091840	789624	6	122,167,174,170,79,198,	0,1430,1687,3546,6917,16001,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	46089428	46092198	chr18:46089428-46092198	0	-	46089428	46089428	8553170	3	304,174,517,	0,394,2253,
#Partially deleted in new
chr18	46089598	46104227	chr18:46089598-46104227	0	-	46089598	46098231	789624	6	134,174,170,79,108,91,	0,224,2083,5454,8573,14538,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	46089631	46104233	chr18:46089631-46104233	0	-	46089631	46091840	789624	6	101,174,170,186,79,97,	0,191,2050,3548,5421,14505,
#Partially deleted in new
chr18	46089758	46104253	chr18:46089758-46104253	0	-	46089758	46089758	8553170	4	238,170,79,117,	0,1923,5294,14378,
#Partially deleted in new
chr18	46089821	46098296	chr18:46089821-46098296	0	-	46095072	46098231	789624	4	175,170,95,125,	0,1860,5231,8350,
#Partially deleted in new
chr18	46089821	46104273	chr18:46089821-46104273	0	-	46089821	46091840	789624	4	175,170,71,137,	0,1860,5231,14315,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	46089958	46099352	chr18:46089958-46099352	0	-	46093242	46099340	789624	5	38,170,183,79,50,	0,1723,3221,5094,9344,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	46093179	46098296	chr18:46093179-46098296	0	-	46093179	46093179	8553170	3	183,152,125,	0,1800,4992,
#Partially deleted in new
chr18	46094699	46098295	chr18:46094699-46098295	0	-	46094699	46094699	8553170	2	432,124,	0,3472,
#Partially deleted in new
chr18	46104331	46128333	chr18:46104331-46128333	3	+	46104411	46128125	789624	9	110,175,136,135,124,66,72,48,259,	0,862,13849,15594,18135,18967,20490,21412,23743,
#Partially deleted in new
chr18	46104377	46119961	chr18:46104377-46119961	0	+	46104411	46119961	789624	4	64,121,136,36,	0,870,13803,15548,
#Partially deleted in new
chr18	46104379	46118474	chr18:46104379-46118474	0	+	46104379	46104379	8553170	3	62,175,294,	0,814,13801,
#Partially deleted in new
chr18	46104384	46128121	chr18:46104384-46128121	0	+	46104411	46122546	789624	6	57,175,124,72,48,47,	0,809,18082,20437,21359,23690,
#Partially deleted in new
chr18	46104395	46128330	chr18:46104395-46128330	0	+	46104411	46105406	789624	9	46,215,136,135,124,66,72,48,256,	0,798,13785,15530,18071,18903,20426,21348,23679,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	46104399	46124893	chr18:46104399-46124893	0	+	46104411	46106715	789624	8	42,175,129,136,135,124,66,72,	0,794,2305,13781,15526,18067,18899,20422,
#Partially deleted in new
chr18	46104401	46128179	chr18:46104401-46128179	1	+	46104411	46125772	789624	6	40,175,66,72,48,105,	0,792,18897,20420,21342,23673,
#Partially deleted in new
chr18	46104405	46128169	chr18:46104405-46128169	0	+	46104411	46122546	789624	7	36,175,124,66,72,48,95,	0,788,18061,18893,20416,21338,23669,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	46104421	46128239	chr18:46104421-46128239	0	+	46104421	46109735	789624	10	20,175,138,136,135,124,66,72,48,165,	0,772,5225,13759,15504,18045,18877,20400,21322,23653,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	46115067	46128269	chr18:46115067-46128269	0	+	46115067	46115067	8553170	8	161,136,135,124,66,72,48,195,	0,3113,4858,7399,8231,9754,10676,13007,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	46121614	46121721	chr18:46121614-46121721	3	-	46121614	46121614	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	46123180	46125975	chr18:46123180-46125975	0	+	46123180	46123180	8553170	2	184,232,	0,2563,
#Partially deleted in new
chr18	46173552	46216318	chr18:46173552-46216318	0	+	46215880	46216318	789624	2	160,508,	0,42258,
#Partially deleted in new
chr18	46173552	46240052	chr18:46173552-46240052	0	+	46216333	46240052	789624	3	160,378,48,	0,42665,66452,
#Partially deleted in new
chr18	46174018	46219242	chr18:46174018-46219242	0	+	46174018	46174018	8553170	2	312,3432,	0,41792,
#Partially deleted in new
chr18	46174026	46266991	chr18:46174026-46266991	3	+	46215880	46263118	789624	5	304,785,183,127,4063,	0,41784,65978,79670,88902,
#Partially deleted in new
chr18	46174033	46266983	chr18:46174033-46266983	1	+	46215880	46263118	789624	4	297,785,127,4055,	0,41777,79663,88895,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	46174085	46232936	chr18:46174085-46232936	1	+	46215880	46228868	789624	4	245,785,141,1158,	0,41725,54670,57693,
#Partially deleted in new
chr18	46326808	46450349	chr18:46326808-46450349	0	+	46433329	46450349	789624	5	139,316,108,130,54,	0,106381,108480,120754,123487,
#Deleted in new
chr18	46333967	46337647	chr18:46333967-46337647	1	+	46334274	46335895	789624	3	145,106,1760,	0,262,1920,
#Deleted in new
chr18	46334027	46336628	chr18:46334027-46336628	1	+	46334274	46335895	789624	2	308,741,	0,1860,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	46334223	46463140	chr18:46334223-46463140	3	+	46334274	46456636	0	8	112,316,108,130,105,96,107,6622,	0,98966,101065,113339,116072,116480,121750,122295,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	46334223	46460820	chr18:46334223-46460820	1	+	46447653	46456636	0	6	112,130,105,96,107,4302,	0,113339,116072,116480,121750,122295,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	46334223	46463140	chr18:46334223-46463140	0	+	46334274	46447588	789624	6	112,130,105,96,107,6622,	0,113339,116072,116480,121750,122295,
#Deleted in new
chr18	46334223	46337127	chr18:46334223-46337127	1	+	46334274	46334481	789624	1	2904,	0,
#Deleted in new
chr18	46385706	46387083	chr18:46385706-46387083	3	+	46385706	46385706	8553170	1	1377,	0,
#Deleted in new
chr18	46409196	46410645	chr18:46409196-46410645	3	-	46409196	46409196	8553170	2	1084,162,	0,1287,
#Partially deleted in new
chr18	46447446	46456067	chr18:46447446-46456067	0	+	46447446	46447446	8553170	4	246,105,96,94,	0,2849,3257,8527,
#Partially deleted in new
chr18	46476971	46519077	chr18:46476971-46519077	1	-	46477217	46518244	789624	10	249,313,159,133,171,186,175,118,128,199,	0,668,6615,8047,12000,28866,30566,32726,41157,41907,
#Partially deleted in new
chr18	46476971	46556769	chr18:46476971-46556769	1	-	46477217	46542853	789624	22	249,313,159,133,171,186,175,118,128,186,209,136,210,155,163,117,182,165,129,105,164,80,	0,668,6615,8047,12000,28866,30566,32726,41157,44125,45129,47494,47736,52205,56190,57363,61184,64804,65755,68345,69923,79718,
#Partially deleted in new
chr18	46476973	46559312	chr18:46476973-46559312	1	-	46477182	46557372	789624	24	247,299,159,133,171,186,175,118,128,186,209,136,210,155,163,117,182,165,129,105,164,134,154,143,	0,680,6613,8045,11998,28864,30564,32724,41155,44123,45127,47492,47734,52203,56188,57361,61182,64802,65753,68343,69921,80382,80928,82196,
#Partially deleted in new
chr18	46477253	46559292	chr18:46477253-46559292	1	-	46477471	46557372	789624	21	699,159,133,171,186,175,118,128,209,136,210,155,163,117,182,165,129,105,164,134,123,	0,6333,7765,11718,28584,30284,32444,40875,44847,47212,47454,51923,55908,57081,60902,64522,65473,68063,69641,80102,81916,
#Partially deleted in new
chr18	46477259	46657033	chr18:46477259-46657033	1	-	46477471	46657033	789624	40	693,159,133,171,186,175,118,128,209,136,210,155,163,117,182,165,129,105,164,134,155,463,161,193,197,77,161,155,136,87,161,136,251,124,149,99,185,81,115,130,	0,6327,7759,11712,28578,30278,32438,40869,44841,47206,47448,51917,55902,57075,60896,64516,65467,68057,69635,80096,82188,82823,85805,88997,92182,94826,100447,102370,114673,115238,116340,117071,123957,126846,133516,140932,162356,164696,171895,179644,
#Partially deleted in new
chr18	46477272	46519086	chr18:46477272-46519086	1	-	46477471	46518244	789624	9	680,159,133,171,186,175,118,128,208,	0,6314,7746,11699,28565,30265,32425,40856,41606,
#Partially deleted in new
chr18	46477272	46657220	chr18:46477272-46657220	3	-	46477471	46657033	789624	41	680,159,133,171,186,175,118,128,186,209,136,210,155,163,117,182,165,129,105,164,134,155,463,161,193,197,77,161,155,136,87,161,136,251,124,149,99,185,81,115,317,	0,6314,7746,11699,28565,30265,32425,40856,43824,44828,47193,47435,51904,55889,57062,60883,64503,65454,68044,69622,80083,82175,82810,85792,88984,92169,94813,100434,102357,114660,115225,116327,117058,123944,126833,133503,140919,162343,164683,171882,179631,
#Partially deleted in new
chr18	46477449	46657033	chr18:46477449-46657033	1	-	46477471	46657033	789624	39	503,159,133,171,186,175,118,128,186,209,136,210,155,163,117,182,165,129,105,164,134,161,193,197,77,161,155,136,87,161,136,251,124,149,99,185,81,115,130,	0,6137,7569,11522,28388,30088,32248,40679,43647,44651,47016,47258,51727,55712,56885,60706,64326,65277,67867,69445,79906,85615,88807,91992,94636,100257,102180,114483,115048,116150,116881,123767,126656,133326,140742,162166,164506,171705,179454,
#Partially deleted in new
chr18	46505891	46520698	chr18:46505891-46520698	0	-	46505891	46518244	789624	5	132,175,118,128,122,	0,1646,3806,12237,14685,
#Partially deleted in new
chr18	46509566	46601663	chr18:46509566-46601663	0	-	46509566	46509566	8553170	27	249,128,209,136,210,155,163,117,182,165,129,105,164,134,155,463,161,193,197,77,161,155,136,87,161,136,447,	0,8562,12534,14899,15141,19610,23595,24768,28589,32209,33160,35750,37328,47789,49881,50516,53498,56690,59875,62519,68140,70063,82366,82931,84033,84764,91650,
#Partially deleted in new
chr18	46509811	46520725	chr18:46509811-46520725	0	-	46509811	46518244	789624	3	4,128,428,	0,8317,10486,
#Partially deleted in new
chr18	46547006	46559289	chr18:46547006-46559289	0	-	46547006	46557372	789624	4	52,134,154,216,	0,10349,10895,12067,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	46667820	46756809	chr18:46667820-46756809	1	-	46680041	46756508	789624	8	12690,93,113,145,87,93,108,432,	0,14151,18353,20954,24348,36751,53541,88557,
#Partially deleted in new
chr18	46679117	46757169	chr18:46679117-46757169	3	-	46680041	46756508	789624	7	1393,93,113,145,87,93,792,	0,2854,7056,9657,13051,25454,77260,
#Partially deleted in new
chr18	46679242	46731763	chr18:46679242-46731763	0	-	46679242	46679242	8553170	9	1268,93,113,93,87,93,108,156,83,	0,2729,6931,9532,12926,25329,42119,50963,52438,
#Partially deleted in new
chr18	46679882	46756810	chr18:46679882-46756810	1	-	46680041	46756508	789624	6	628,93,113,145,87,433,	0,2089,6291,8892,12286,76495,
#Partially deleted in new
chr18	46680367	46688981	chr18:46680367-46688981	0	-	46680367	46680367	8553170	4	143,93,113,207,	0,1604,5806,8407,
#Partially deleted in new
chr18	46685868	46688917	chr18:46685868-46688917	0	-	46685868	46685868	8553170	2	418,143,	0,2906,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	46688883	46759142	chr18:46688883-46759142	0	-	46704605	46759100	789624	4	36,87,93,148,	0,3285,15688,70111,
#Partially deleted in new
chr18	46691449	46756810	chr18:46691449-46756810	0	-	46691449	46691449	8553170	4	806,93,108,433,	0,13122,29912,64928,
#Deleted in new
chr18	46722974	46723223	chr18:46722974-46723223	7	+	46722974	46722974	16724991	1	249,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	46730205	46759257	chr18:46730205-46759257	0	-	46731826	46759100	789624	3	156,163,263,	0,1475,28789,
#Deleted in new
chr18	46756486	46757076	chr18:46756486-46757076	1	+	46756486	46756486	8553170	2	138,294,	0,296,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	46756932	46760344	chr18:46756932-46760344	3	+	46756932	46756932	8553170	2	99,534,	0,2878,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	46759723	46764408	chr18:46759723-46764408	0	+	46759723	46759723	8553170	1	4685,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	46786698	46789297	chr18:46786698-46789297	3	-	46786698	46786698	8553170	1	2599,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr18	46803223	46917345	chr18:46803223-46917345	3	-	46812432	46917345	0	14	9389,38,140,172,134,161,74,106,135,91,51,85,475,24,	0,12088,17709,24735,26510,33133,40830,41510,43483,52121,52341,60940,87356,114098,
#Partially deleted in new
chr18	46812279	46917454	chr18:46812279-46917454	0	-	46855565	46917345	789624	13	333,38,140,172,134,161,74,106,135,91,51,475,133,	0,3032,8653,15679,17454,24077,31774,32454,34427,43065,43285,78300,105042,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr18	46815710	46917503	chr18:46815710-46917503	1	-	46818376	46917345	0	13	2737,140,172,134,161,74,106,135,91,51,85,475,182,	0,5222,12248,14023,20646,28343,29023,30996,39634,39854,48453,74869,101611,
#Partially deleted in new
chr18	46818190	46917505	chr18:46818190-46917505	1	-	46818376	46844830	789624	12	257,140,172,134,161,74,106,135,91,51,85,184,	0,2742,9768,11543,18166,25863,26543,28516,37154,37374,45973,99131,
#Partially deleted in new
chr18	46827757	46917474	chr18:46827757-46917474	0	-	46827757	46827757	8553170	11	373,134,161,74,106,135,91,51,85,475,153,	0,1976,8599,16296,16976,18949,27587,27807,36406,62822,89564,
#Partially deleted in new
chr18	46836242	46920160	chr18:46836242-46920160	0	-	46836242	46836242	8553170	9	275,74,106,135,91,51,85,475,102,	0,7811,8491,10464,19102,19322,27921,54337,83816,
#Deleted in new
chr18	46843850	46844971	chr18:46843850-46844971	0	-	46843850	46843850	8553170	2	277,238,	0,883,
#Partially deleted in new
chr18	46846463	46864232	chr18:46846463-46864232	0	-	46846463	46846463	8553170	4	378,91,51,69,	0,8881,9101,17700,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	46852631	46853882	chr18:46852631-46853882	7	-	46852631	46852631	16724991	3	480,87,54,	0,799,1197,
#Partially deleted in new
chr18	46890808	46917079	chr18:46890808-46917079	0	-	46890808	46916846	789624	2	246,251,	0,26020,
#Partially deleted in new
chr18	46905759	46917350	chr18:46905759-46917350	0	-	46905759	46905759	8553170	2	556,29,	0,11562,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	46907497	46907999	chr18:46907497-46907999	0	-	46907497	46907497	8553170	2	62,342,	0,160,
#Deleted in new
chr18	46915020	46915623	chr18:46915020-46915623	3	-	46915020	46915020	8553170	1	603,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	46917491	47098482	chr18:46917491-47098482	1	+	46946872	47084395	789624	7	435,219,70,92,111,111,310,	0,28565,29362,157785,159859,166840,180681,
#Partially deleted in new
chr18	46946796	47063361	chr18:46946796-47063361	0	+	47046462	47063361	789624	8	127,137,167,40,118,99,99,78,	0,99594,106083,107602,111438,112759,116175,116487,
#Partially deleted in new
chr18	46946823	47102243	chr18:46946823-47102243	1	+	47052973	47101005	789624	15	100,167,43,118,99,99,78,99,64,119,92,111,163,103,1378,	0,106056,107572,111411,112732,116148,116460,120197,122396,122658,128453,130527,152419,153430,154042,
#Partially deleted in new
chr18	46946854	47101005	chr18:46946854-47101005	3	+	46946872	47101005	789624	16	69,71,167,43,118,99,99,78,99,64,119,92,111,163,103,140,	0,99602,106025,107541,111380,112701,116117,116429,120166,122365,122627,128422,130496,152388,153399,154011,
#Deleted in new
chr18	46962767	46964408	chr18:46962767-46964408	3	-	46962767	46964408	789624	1	1641,	0,
#Deleted in new
chr18	46968694	46969912	chr18:46968694-46969912	3	-	46968694	46969912	789624	1	1218,	0,
#Deleted in new
chr18	47022286	47023927	chr18:47022286-47023927	3	-	47022286	47023927	789624	1	1641,	0,
#Deleted in new
chr18	47028201	47030078	chr18:47028201-47030078	3	-	47028201	47029842	789624	1	1877,	0,
#Deleted in new
chr18	47032571	47035621	chr18:47032571-47035621	3	-	47033002	47035264	789624	1	3050,	0,
#Deleted in new
chr18	47033002	47035264	chr18:47033002-47035264	1	-	47033002	47035264	789624	3	118,827,696,	0,163,1566,
#Deleted in new
chr18	47052892	47054601	chr18:47052892-47054601	0	+	47052892	47052892	8553170	2	154,203,	0,1506,
#Partially deleted in new
chr18	47058233	47100335	chr18:47058233-47100335	0	+	47058233	47100335	789624	10	119,99,99,78,64,119,92,111,163,79,	0,1322,4738,5050,10986,11248,17043,19117,41009,42023,
#Partially deleted in new
chr18	47069222	47077542	chr18:47069222-47077542	0	+	47069222	47077465	789624	4	61,119,92,192,	0,259,6054,8128,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	47069585	47098948	chr18:47069585-47098948	0	+	47069585	47098419	789624	4	15,92,111,776,	0,5691,7765,28587,
#Deleted in new
chr18	47076116	47076594	chr18:47076116-47076594	3	+	47076116	47076116	8553170	1	478,	0,
#Partially deleted in new
chr18	47077360	47091280	chr18:47077360-47091280	3	-	47077360	47077360	8553170	2	93,107,	0,13813,
#Deleted in new
chr18	47105945	47108062	chr18:47105945-47108062	3	+	47105945	47105945	8553170	1	2117,	0,
#Partially deleted in new
chr18	47107402	47150520	chr18:47107402-47150520	3	-	47108681	47136439	0	7	1383,64,217,85,209,111,143,	0,5574,7729,22841,27093,28936,42975,
#Partially deleted in new
chr18	47107407	47150500	chr18:47107407-47150500	0	-	47134677	47136439	789624	7	1378,64,217,85,209,148,123,	0,5569,7724,22836,27088,28894,42970,
#Deleted in new
chr18	47107627	47110856	chr18:47107627-47110856	0	-	47107627	47107627	8553170	1	3229,	0,
#Partially deleted in new
chr18	47108187	47176345	chr18:47108187-47176345	2	-	47136417	47176277	789624	7	598,64,217,85,209,111,159,	0,4789,6944,22056,26308,28151,67999,
#Partially deleted in new
chr18	47108377	47150476	chr18:47108377-47150476	0	-	47108377	47108377	8553170	4	408,64,217,99,	0,4599,6754,42000,
#Partially deleted in new
chr18	47115130	47150459	chr18:47115130-47150459	0	-	47115130	47136439	789624	6	218,85,209,111,104,82,	0,15113,19365,21208,22104,35247,
#Partially deleted in new
chr18	47115278	47150498	chr18:47115278-47150498	0	-	47115278	47136439	789624	5	70,85,182,111,121,	0,14965,19217,21060,35099,
#Partially deleted in new
chr18	47115315	47150493	chr18:47115315-47150493	0	-	47134677	47136439	789624	5	33,209,148,62,116,	0,19180,20986,21919,35062,
#Partially deleted in new
chr18	47130241	47150479	chr18:47130241-47150479	0	-	47130241	47136439	789624	5	87,209,111,60,102,	0,4254,6097,18807,20136,
#Partially deleted in new
chr18	47130242	47150201	chr18:47130242-47150201	0	-	47130242	47136439	789624	4	86,209,111,140,	0,4253,6096,19819,
#Partially deleted in new
chr18	47130243	47150476	chr18:47130243-47150476	0	-	47130243	47136439	789624	5	85,209,111,62,99,	0,4252,6095,6991,20134,
#Partially deleted in new
chr18	47130243	47150195	chr18:47130243-47150195	0	-	47134677	47136439	789624	4	85,209,148,134,	0,4252,6058,19818,
#Partially deleted in new
chr18	47130245	47150498	chr18:47130245-47150498	0	-	47130245	47136439	789624	5	83,182,111,62,121,	0,4250,6093,6989,20132,
#Partially deleted in new
chr18	47134418	47150500	chr18:47134418-47150500	0	-	47134418	47134418	8553170	3	286,148,123,	0,1883,15959,
#Partially deleted in new
chr18	47134655	47176281	chr18:47134655-47176281	1	-	47156176	47176277	8553170	6	49,111,89,115,102,95,	0,1683,20143,21462,22780,41531,
#Partially deleted in new
chr18	47134655	47176280	chr18:47134655-47176280	0	-	47136417	47176277	789624	3	49,148,94,	0,1646,41531,
#Deleted in new
chr18	47137017	47137290	chr18:47137017-47137290	7	+	47137017	47137017	16724991	1	273,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	47152833	47176374	chr18:47152833-47176374	3	-	47156176	47176277	789624	3	3399,102,188,	0,4602,23353,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	47156881	47176362	chr18:47156881-47176362	1	-	47157418	47176277	789624	2	656,176,	0,19305,
#Partially deleted in new
chr18	47206321	47251603	chr18:47206321-47251603	1	-	47212088	47249183	789624	9	571,66,68,99,66,75,64,2660,230,	0,5764,13621,24137,24613,38586,39176,40249,45052,
#Partially deleted in new
chr18	47212088	47249183	chr18:47212088-47249183	1	-	47212088	47249183	789624	7	63,68,99,66,75,64,2613,	0,7854,18370,18846,32819,33409,34482,
#Partially deleted in new
chr18	47231122	47249183	chr18:47231122-47249183	3	-	47231122	47249183	789624	3	42,75,774,	0,13785,17287,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	47234441	47234548	chr18:47234441-47234548	3	-	47234441	47234441	8553170	1	107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	47285724	47594550	chr18:47285724-47594550	3	+	47285724	47285724	789624	3	37,136,502,	0,288871,308324,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	47285724	47574733	chr18:47285724-47574733	0	+	47285724	47285724	8553170	3	73,118,138,	0,276009,288871,
#Deleted in new
chr18	47380495	47380565	chr18:47380495-47380565	3	+	47380495	47380495	5263520	1	70,	0,
#Partially deleted in new
chr18	47501171	47558383	chr18:47501171-47558383	3	+	47501171	47501171	8553170	4	68,207,240,30,	0,10568,44242,57182,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	47501171	47503106	chr18:47501171-47503106	3	+	47501171	47501171	8553170	1	1935,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	47574595	47587589	chr18:47574595-47587589	1	+	47574595	47574595	8553170	4	351,145,119,89,	0,2470,8079,12905,
#Deleted in new
chr18	47630111	47630848	chr18:47630111-47630848	7	+	47630111	47630111	16724991	1	737,	0,
#Deleted in new
chr18	47703174	47703745	chr18:47703174-47703745	7	+	47703174	47703174	16724991	1	571,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr18	47808956	47930559	chr18:47808956-47930559	3	-	47841826	47896756	0	11	32994,145,138,213,54,75,135,194,90,289,199,	0,36383,36706,39518,42317,56102,59366,60286,61518,87564,121404,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr18	47831550	47931141	chr18:47831550-47931141	1	-	47841826	47896756	0	11	10400,145,138,213,54,75,135,194,90,289,342,	0,13789,14112,16924,19723,33508,36772,37692,38924,64970,99249,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	47833095	47931146	chr18:47833095-47931146	1	-	47841826	47896756	0	10	8855,145,138,213,54,75,135,194,289,347,	0,12244,12567,15379,18178,31963,35227,36147,63425,97704,
#Partially deleted in new
chr18	47841224	47896811	chr18:47841224-47896811	1	-	47841826	47896756	0	9	726,145,138,213,54,75,135,194,291,	0,4115,4438,7250,10049,23834,27098,28018,55296,
#Partially deleted in new
chr18	47844911	47930842	chr18:47844911-47930842	1	-	47845233	47896756	789624	9	573,138,213,54,75,135,194,289,43,	0,751,3563,6362,20147,23411,24331,51609,85888,
#Deleted in new
chr18	47866838	47867367	chr18:47866838-47867367	3	+	47866838	47866838	8553170	1	529,	0,
#Partially deleted in new
chr18	47868262	47886923	chr18:47868262-47886923	0	-	47868262	47868262	8553170	4	195,194,90,105,	0,980,2212,18556,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	47868325	47930599	chr18:47868325-47930599	0	-	47868325	47896756	789624	6	132,194,90,289,98,239,	0,917,2149,28195,51746,62035,
#Partially deleted in new
chr18	47868326	47930837	chr18:47868326-47930837	0	-	47868326	47896756	789624	6	131,194,90,289,86,38,	0,916,2148,28194,62034,62473,
#Partially deleted in new
chr18	47869351	47930362	chr18:47869351-47930362	0	-	47869351	47896756	789624	4	85,90,289,111,	0,1123,27169,60900,
#Partially deleted in new
chr18	47869421	47895725	chr18:47869421-47895725	0	-	47869421	47869421	8553170	3	15,90,459,	0,1053,25845,
#Partially deleted in new
chr18	47870472	47930855	chr18:47870472-47930855	0	-	47870472	47896756	789624	4	92,289,86,60,	0,26048,59888,60323,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	47870474	47923642	chr18:47870474-47923642	0	-	47870474	47896756	789624	5	90,289,98,109,77,	0,26046,49597,52072,53091,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	47878294	47882444	chr18:47878294-47882444	3	+	47878294	47878294	8553170	2	199,83,	0,4067,
#Deleted in new
chr18	47912206	47912504	chr18:47912206-47912504	3	-	47912206	47912206	8553170	1	298,	0,
#Partially deleted in new
chr18	48026672	48137361	chr18:48026672-48137361	1	-	48029259	48041107	789624	3	3239,1224,355,	0,13227,110334,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	48026672	48165566	chr18:48026672-48165566	1	-	48029259	48041107	789624	3	3239,1224,436,	0,13227,138458,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	48026672	48165566	chr18:48026672-48165566	1	-	48029259	48041107	789624	4	3239,1224,50,436,	0,13227,135675,138458,
#Partially deleted in new
chr18	48026672	48409422	chr18:48026672-48409422	3	-	48029259	48041107	789624	5	3239,1224,62,225,197,	0,13227,159261,311501,382553,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	48041032	48409292	chr18:48041032-48409292	0	-	48041032	48041107	789624	4	91,127,62,67,	0,124098,144901,368193,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	48041032	48338391	chr18:48041032-48338391	0	-	48041032	48041107	789624	5	91,68,127,62,218,	0,35903,124098,144901,297141,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	48041032	48409292	chr18:48041032-48409292	0	-	48041032	48041107	789624	6	91,127,132,62,225,67,	0,124098,144291,144901,297141,368193,
#Partially deleted in new
chr18	48041032	48409292	chr18:48041032-48409292	0	-	48041032	48041107	789624	5	91,151,62,225,67,	0,31427,144901,297141,368193,
#Partially deleted in new
chr18	48041032	48338391	chr18:48041032-48338391	0	-	48041032	48041107	789624	4	91,91,62,218,	0,139354,144901,297141,
#Partially deleted in new
chr18	48041032	48409292	chr18:48041032-48409292	0	-	48041032	48041107	789624	6	91,148,132,62,225,67,	0,139297,144291,144901,297141,368193,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	48041032	48338391	chr18:48041032-48338391	0	-	48041032	48041107	789624	5	91,68,131,62,218,	0,35903,124094,144901,297141,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	48041032	48409292	chr18:48041032-48409292	0	-	48041032	48041107	789624	5	91,127,62,225,67,	0,124098,144901,297141,368193,
#Partially deleted in new
chr18	48041032	48409292	chr18:48041032-48409292	0	-	48041032	48041107	789624	4	91,62,298,67,	0,144901,367325,368193,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	48041032	48409292	chr18:48041032-48409292	0	-	48041032	48041107	789624	5	91,50,127,62,67,	0,121315,124098,144901,368193,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	48041032	48338391	chr18:48041032-48338391	0	-	48041032	48041107	789624	6	91,50,127,132,62,218,	0,121315,124098,144291,144901,297141,
#Partially deleted in new
chr18	48041051	48203601	chr18:48041051-48203601	0	-	48041051	48041107	789624	3	72,62,187,	0,144882,162363,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	48041051	48375586	chr18:48041051-48375586	0	-	48041051	48041107	789624	6	72,50,127,62,225,49,	0,121296,124079,144882,297122,334486,
#Partially deleted in new
chr18	48041051	48410752	chr18:48041051-48410752	0	-	48041051	48041107	789624	5	72,132,62,225,74,	0,144272,144882,297122,369627,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	48041051	48375625	chr18:48041051-48375625	0	-	48041051	48041107	789624	5	72,127,62,225,88,	0,124079,144882,297122,334486,
#Partially deleted in new
chr18	48041051	48375608	chr18:48041051-48375608	0	-	48041051	48041107	789624	4	72,62,225,71,	0,144882,297122,334486,
#Partially deleted in new
chr18	48041062	48375564	chr18:48041062-48375564	0	-	48041062	48041107	789624	5	61,62,225,92,27,	0,144871,297111,333159,334475,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	48041062	48375564	chr18:48041062-48375564	0	-	48041062	48041107	789624	9	61,127,62,138,225,146,44,61,27,	0,124068,144871,211098,297111,305490,309482,323091,334475,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	48041062	48375564	chr18:48041062-48375564	0	-	48041062	48041107	789624	6	61,123,132,62,225,27,	0,124068,144261,144871,297111,334475,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	48041062	48375564	chr18:48041062-48375564	0	-	48041062	48041107	789624	6	61,50,123,62,225,27,	0,121285,124068,144871,297111,334475,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	48041062	48375564	chr18:48041062-48375564	0	-	48041062	48041107	789624	6	61,68,123,62,225,27,	0,35873,124068,144871,297111,334475,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	48147633	48150864	chr18:48147633-48150864	3	-	48147633	48147633	8553170	2	2393,480,	0,2751,
#Deleted in new
chr18	48252300	48252837	chr18:48252300-48252837	3	+	48252300	48252300	8553170	1	537,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	48475486	48475600	chr18:48475486-48475600	7	-	48475486	48475486	16724991	1	114,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	48478281	48478491	chr18:48478281-48478491	7	-	48478281	48478281	16724991	1	210,	0,
#Partially deleted in new
chr18	48478560	48479228	chr18:48478560-48479228	7	+	48478560	48478560	16724991	1	668,	0,
#Partially deleted in new
chr18	48539045	48863217	chr18:48539045-48863217	3	+	48619565	48859559	789624	12	267,208,72,74,105,76,77,487,300,156,54,3874,	0,80492,97568,124706,125401,131623,172573,218873,222344,278175,318542,320298,
#Partially deleted in new
chr18	48539157	48861906	chr18:48539157-48861906	1	+	48619565	48859559	789624	13	155,74,208,72,74,105,76,77,493,300,156,54,2563,	0,600,80380,97456,124594,125289,131511,172461,218761,222232,278063,318430,320186,
#Partially deleted in new
chr18	48539209	48663811	chr18:48539209-48663811	0	+	48619565	48663811	789624	5	103,208,48,72,60,	0,80328,85979,97404,124542,
#Partially deleted in new
chr18	48539414	48664534	chr18:48539414-48664534	0	+	48619565	48664534	789624	5	417,208,72,74,88,	0,80123,97199,124337,125032,
#Partially deleted in new
chr18	48539987	48711695	chr18:48539987-48711695	0	+	48619565	48711695	789624	7	71,208,72,74,105,76,77,	0,79550,96626,123764,124459,130681,171631,
#Partially deleted in new
chr18	48540094	48663812	chr18:48540094-48663812	0	+	48619565	48663812	789624	4	243,208,72,61,	0,79443,96519,123657,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	48564794	48568342	chr18:48564794-48568342	3	+	48564794	48564794	8553170	1	3548,	0,
#Partially deleted in new
chr18	48621443	48711657	chr18:48621443-48711657	0	+	48621443	48621443	8553170	6	198,72,74,105,76,39,	0,15170,42308,43003,49225,90175,
#Deleted in new
chr18	48661839	48662635	chr18:48661839-48662635	3	-	48661839	48661839	8553170	1	796,	0,
#Deleted in new
chr18	48670599	48670668	chr18:48670599-48670668	3	+	48670599	48670599	5263520	1	69,	0,
#Partially deleted in new
chr18	48673574	48688419	chr18:48673574-48688419	3	-	48673574	48673574	8553170	3	102,196,167,	0,9382,14678,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	48692511	48758229	chr18:48692511-48758229	0	+	48692511	48692511	8553170	3	159,77,311,	0,19107,65407,
#Deleted in new
chr18	48755692	48756318	chr18:48755692-48756318	3	+	48755692	48755692	8553170	1	626,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	48760181	48860565	chr18:48760181-48860565	0	+	48760181	48760181	8553170	4	1508,156,54,1222,	0,57039,97406,99162,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	48826050	48834770	chr18:48826050-48834770	3	-	48826050	48826050	8553170	2	798,79,	0,8641,
#Deleted in new
chr18	48859881	48862355	chr18:48859881-48862355	0	+	48859881	48859881	8553170	3	548,76,328,	0,1335,2146,
#Deleted in new
chr18	48862543	48863208	chr18:48862543-48863208	0	+	48862543	48862543	8553170	2	82,330,	0,335,
#Partially deleted in new
chr18	48919852	48952052	chr18:48919852-48952052	3	-	48921371	48950424	0	4	2058,75,54,2241,	0,22628,28531,29959,
#Partially deleted in new
chr18	48920026	48942807	chr18:48920026-48942807	0	-	48920026	48920026	8553170	2	1884,327,	0,22454,
#Partially deleted in new
chr18	48920992	48949333	chr18:48920992-48949333	1	-	48921371	48948405	0	4	918,75,54,105,	0,21488,27391,28236,
#Partially deleted in new
chr18	48921371	48950424	chr18:48921371-48950424	1	-	48921371	48950424	0	4	539,72,54,613,	0,21109,27012,28440,
#Partially deleted in new
chr18	48921410	48930182	chr18:48921410-48930182	0	-	48921410	48921410	8553170	2	500,49,	0,8723,
#Partially deleted in new
chr18	48921500	48942732	chr18:48921500-48942732	0	-	48921500	48921500	8553170	3	410,75,78,	0,20980,21154,
#Partially deleted in new
chr18	48921533	48948505	chr18:48921533-48948505	0	-	48921533	48948405	789624	3	377,75,122,	0,20947,26850,
#Partially deleted in new
chr18	48921640	48933722	chr18:48921640-48933722	0	-	48921640	48921640	8553170	2	270,131,	0,11951,
#Deleted in new
chr18	48962950	48963941	chr18:48962950-48963941	3	-	48962950	48962950	8553170	2	230,122,	0,869,
#Deleted in new
chr18	49013105	49013819	chr18:49013105-49013819	3	+	49013105	49013105	8553170	1	714,	0,
#Partially deleted in new
chr18	49023702	49048474	chr18:49023702-49048474	3	+	49023702	49023702	789624	5	37,88,117,70,347,	0,519,2334,16297,24425,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr18	49041473	49460802	chr18:49041473-49460802	3	-	49044054	49430394	789624	17	2731,114,183,103,95,114,126,179,183,143,126,73,134,94,53,193,405,	0,55928,77270,122211,215536,216906,230704,240523,244960,290390,292254,321687,337093,338191,350119,388781,418924,
#Partially deleted in new
chr18	49043668	49460665	chr18:49043668-49460665	1	-	49044054	49430394	789624	12	536,114,183,103,95,114,126,179,183,53,193,268,	0,53733,75075,120016,213341,214711,228509,238328,242765,347924,386586,416729,
#Partially deleted in new
chr18	49043803	49097493	chr18:49043803-49097493	0	-	49044188	49097493	789624	3	401,95,92,	0,49413,53598,
#Deleted in new
chr18	49049686	49049768	chr18:49049686-49049768	3	-	49049686	49049686	5263520	1	82,	0,
#Partially deleted in new
chr18	49097184	49116189	chr18:49097184-49116189	0	-	49097184	49097184	8553170	3	314,108,165,	0,17323,18840,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	49116300	49126479	chr18:49116300-49126479	3	+	49116300	49116300	8553170	2	184,318,	0,9861,
#Partially deleted in new
chr18	49163710	49258408	chr18:49163710-49258408	0	-	49163710	49258408	789624	4	77,165,95,29,	0,45840,93299,94669,
#Partially deleted in new
chr18	49205911	49208781	chr18:49205911-49208781	3	+	49205911	49205911	8553170	3	55,114,303,	0,544,2567,
#Partially deleted in new
chr18	49282167	49368706	chr18:49282167-49368706	0	-	49282167	49363189	789624	6	8,183,143,126,73,35,	0,4266,49696,51560,80993,86504,
#Partially deleted in new
chr18	49286447	49411941	chr18:49286447-49411941	0	-	49378589	49379673	789624	9	166,135,143,126,73,134,94,53,37,	0,43125,45416,47280,76713,92119,93217,105145,125457,
#Partially deleted in new
chr18	49286451	49359872	chr18:49286451-49359872	0	-	49286451	49286451	8553170	4	165,143,126,124,	0,45412,47276,73297,
#Partially deleted in new
chr18	49286487	49368697	chr18:49286487-49368697	0	-	49286487	49363189	789624	5	126,143,126,73,96,	0,45376,47240,76673,82114,
#Partially deleted in new
chr18	49286488	49368713	chr18:49286488-49368713	0	-	49286488	49363189	789624	5	128,143,126,73,96,	0,45375,47239,76672,82129,
#Partially deleted in new
chr18	49286496	49368707	chr18:49286496-49368707	0	-	49286496	49363189	789624	5	120,143,126,73,106,	0,45367,47231,76664,82105,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	49321124	49378649	chr18:49321124-49378649	1	-	49321324	49363189	789624	6	253,143,126,73,77,83,	0,10739,12603,42036,54523,57442,
#Partially deleted in new
chr18	49378658	49461347	chr18:49378658-49461347	0	-	49378658	49430394	789624	5	42,94,53,193,172,	0,1006,12934,51596,82517,
#Partially deleted in new
chr18	49379745	49460638	chr18:49379745-49460638	0	-	49379745	49379745	8553170	5	13,67,53,193,241,	0,11639,11847,50509,80652,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	49390719	49460714	chr18:49390719-49460714	0	-	49390719	49390719	8553170	4	93,53,193,317,	0,873,39535,69678,
#Partially deleted in new
chr18	49431743	49447420	chr18:49431743-49447420	3	-	49431743	49431743	8553170	2	184,148,	0,15529,
#Deleted in new
chr18	49469802	49470223	chr18:49469802-49470223	7	+	49469802	49469802	16724991	1	421,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	49477249	49487252	chr18:49477249-49487252	3	-	49482344	49483748	789624	3	5161,188,46,	0,6334,9957,
#Partially deleted in new
chr18	49481659	49487231	chr18:49481659-49487231	1	-	49482344	49483748	789624	3	751,188,189,	0,1924,5383,
#Partially deleted in new
chr18	49481680	49491586	chr18:49481680-49491586	3	-	49483591	49491571	789624	7	730,188,192,99,135,41,55,	0,1903,7678,8773,9112,9724,9851,
#Partially deleted in new
chr18	49482065	49486613	chr18:49482065-49486613	1	-	49482344	49483748	789624	3	345,188,181,	0,1518,4367,
#Partially deleted in new
chr18	49482151	49492479	chr18:49482151-49492479	1	-	49483591	49490894	789624	7	259,188,192,99,135,53,22,	0,1432,7207,8302,8641,9380,10306,
#Partially deleted in new
chr18	49482175	49491586	chr18:49482175-49491586	0	-	49488518	49491571	789624	8	235,188,67,192,99,135,41,55,	0,1408,6324,7183,8278,8617,9229,9356,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	49484535	49486149	chr18:49484535-49486149	3	-	49484535	49484535	8553170	2	287,196,	0,1418,
#Partially deleted in new
chr18	49487338	49491878	chr18:49487338-49491878	3	+	49487338	49487338	8553170	2	479,103,	0,4437,
#Partially deleted in new
chr18	49487372	49487422	chr18:49487372-49487422	3	+	49487372	49487372	5263520	1	50,	0,
#Partially deleted in new
chr18	49488452	49492482	chr18:49488452-49492482	1	-	49488518	49491571	0	8	114,192,99,135,41,53,88,25,	0,906,2001,2340,2952,3079,3293,4005,
#Partially deleted in new
chr18	49488480	49490938	chr18:49488480-49490938	0	-	49488480	49488480	8553170	4	86,192,99,146,	0,878,1973,2312,
#Partially deleted in new
chr18	49488480	49492409	chr18:49488480-49492409	0	-	49488518	49491571	0	8	86,192,99,135,41,53,98,152,	0,878,1973,2312,2924,3051,3255,3777,
#Partially deleted in new
chr18	49488483	49492444	chr18:49488483-49492444	1	-	49488518	49491571	0	7	83,192,99,135,41,53,187,	0,875,1970,2309,2921,3048,3774,
#Partially deleted in new
chr18	49488483	49491840	chr18:49488483-49491840	1	-	49488518	49491571	0	6	83,192,99,135,41,309,	0,875,1970,2309,2921,3048,
#Partially deleted in new
chr18	49488483	49492523	chr18:49488483-49492523	3	-	49488518	49491571	0	7	83,192,99,135,41,53,66,	0,875,1970,2309,2921,3048,3974,
#Partially deleted in new
chr18	49488483	49492479	chr18:49488483-49492479	1	-	49488518	49490894	0	6	83,192,99,135,53,22,	0,875,1970,2309,3048,3974,
#Partially deleted in new
chr18	49488517	49491814	chr18:49488517-49491814	1	-	49488518	49491635	789624	6	49,192,99,135,41,189,	0,841,1936,2275,2887,3108,
#Partially deleted in new
chr18	49488551	49492399	chr18:49488551-49492399	0	-	49488551	49491571	789624	8	15,192,99,135,41,53,98,125,	0,807,1902,2241,2853,2980,3184,3723,
#Partially deleted in new
chr18	49488560	49492432	chr18:49488560-49492432	0	-	49488560	49491571	789624	7	6,192,99,135,41,53,158,	0,798,1893,2232,2844,2971,3714,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	49489164	49490468	chr18:49489164-49490468	0	-	49489164	49489164	8553170	2	386,15,	0,1289,
#Deleted in new
chr18	49489244	49489308	chr18:49489244-49489308	3	-	49489244	49489244	789624	1	64,	0,
#Deleted in new
chr18	49489358	49492483	chr18:49489358-49492483	0	-	49489358	49491571	789624	6	192,99,135,41,302,26,	0,1095,1434,2046,2173,3099,
#Deleted in new
chr18	49489360	49491586	chr18:49489360-49491586	0	-	49489360	49489360	8553170	5	190,99,135,94,55,	0,1093,1432,1991,2171,
#Deleted in new
chr18	49489375	49490874	chr18:49489375-49490874	0	-	49489375	49489375	8553170	2	175,421,	0,1078,
#Deleted in new
chr18	49489451	49492508	chr18:49489451-49492508	0	-	49489451	49491571	789624	7	99,99,135,41,53,98,51,	0,1002,1341,1953,2080,2284,3006,
#Deleted in new
chr18	49489470	49492428	chr18:49489470-49492428	0	-	49489470	49491571	789624	7	80,99,135,41,53,88,154,	0,983,1322,1934,2061,2275,2804,
#Deleted in new
chr18	49489476	49492433	chr18:49489476-49492433	0	-	49489476	49491571	789624	6	74,99,135,41,302,176,	0,977,1316,1928,2055,2781,
#Deleted in new
chr18	49490260	49490969	chr18:49490260-49490969	0	-	49490260	49490260	8553170	2	292,177,	0,532,
#Deleted in new
chr18	49490475	49492305	chr18:49490475-49492305	0	-	49490475	49491571	789624	5	77,135,41,302,31,	0,317,929,1056,1799,
#Deleted in new
chr18	49490840	49492430	chr18:49490840-49492430	0	-	49490840	49491571	789624	4	87,41,53,300,	0,564,691,1290,
#Deleted in new
chr18	49490863	49492450	chr18:49490863-49492450	0	-	49490863	49490863	8553170	2	721,193,	0,1394,
#Deleted in new
chr18	49490964	49492485	chr18:49490964-49492485	0	-	49490964	49490964	8553170	3	481,53,28,	0,567,1493,
#Deleted in new
chr18	49491049	49492485	chr18:49491049-49492485	0	-	49491049	49491049	8553170	2	535,28,	0,1408,
#Deleted in new
chr18	49491262	49492479	chr18:49491262-49492479	0	-	49491262	49491262	8553170	2	571,22,	0,1195,
#Deleted in new
chr18	49491282	49491347	chr18:49491282-49491347	3	-	49491282	49491282	789624	1	65,	0,
#Deleted in new
chr18	49491663	49491729	chr18:49491663-49491729	3	-	49491663	49491663	789624	1	66,	0,
#Deleted in new
chr18	49495146	49496896	chr18:49495146-49496896	7	-	49495146	49495146	16724991	1	1750,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	49499389	49501860	chr18:49499389-49501860	3	+	49499389	49499389	8553170	2	35,2155,	0,316,
#Partially deleted in new
chr18	49560698	49581849	chr18:49560698-49581849	1	+	49561685	49581686	789624	6	1192,182,180,112,222,435,	0,4618,6743,8738,14670,20716,
#Partially deleted in new
chr18	49561171	49567475	chr18:49561171-49567475	0	+	49565459	49567475	789624	3	289,182,34,	0,4145,6270,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	49562030	49599182	chr18:49562030-49599182	3	+	49562308	49590522	789624	10	375,182,180,112,222,243,121,219,105,8682,	0,3286,5411,7406,13338,19384,20331,21525,24715,28470,
#Partially deleted in new
chr18	49562059	49590752	chr18:49562059-49590752	1	+	49562308	49590522	789624	9	346,182,180,112,243,121,219,105,252,	0,3257,5382,7377,19355,20302,21496,24686,28441,
#Partially deleted in new
chr18	49562086	49581852	chr18:49562086-49581852	1	+	49562308	49581686	789624	6	319,182,180,112,222,438,	0,3230,5355,7350,13282,19328,
#Partially deleted in new
chr18	49562344	49567763	chr18:49562344-49567763	0	+	49562344	49567763	789624	3	61,182,322,	0,2972,5097,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	49589358	49592906	chr18:49589358-49592906	0	+	49589358	49589358	8553170	1	3548,	0,
#Deleted in new
chr18	49650349	49651160	chr18:49650349-49651160	7	+	49650349	49650349	16724991	1	811,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	49739822	49742063	chr18:49739822-49742063	3	-	49739822	49739822	8553170	2	302,38,	0,2203,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	49782166	49813960	chr18:49782166-49813960	3	-	49783846	49813484	0	10	1765,155,71,130,176,148,117,129,167,492,	0,3030,5124,9303,9985,12113,13598,15299,20520,31302,
#Partially deleted in new
chr18	49783502	49813042	chr18:49783502-49813042	1	-	49783846	49802704	789624	10	429,155,71,130,176,148,117,129,167,318,	0,1694,3788,7967,8649,10777,12262,13963,19184,29222,
#Partially deleted in new
chr18	49783504	49813953	chr18:49783504-49813953	1	-	49783846	49813823	789624	10	427,155,71,130,176,148,117,129,167,137,	0,1692,3786,7965,8647,10775,12260,13961,19182,30312,
#Deleted in new
chr18	49783504	49786619	chr18:49783504-49786619	0	-	49783504	49783504	8553170	2	427,1423,	0,1692,
#Partially deleted in new
chr18	49794319	49813937	chr18:49794319-49813937	0	-	49794319	49802704	789624	5	108,117,129,167,206,	0,1445,3146,8367,19412,
#Partially deleted in new
chr18	49795775	49811531	chr18:49795775-49811531	0	-	49795775	49802704	789624	4	106,129,167,136,	0,1690,6911,15620,
#Partially deleted in new
chr18	49795792	49837623	chr18:49795792-49837623	3	-	49826470	49837623	789624	7	89,129,167,188,81,175,107,	0,1673,6894,30643,39551,40918,41724,
#Partially deleted in new
chr18	49795810	49813953	chr18:49795810-49813953	0	-	49795810	49802704	789624	4	71,129,167,272,	0,1655,6876,17871,
#Partially deleted in new
chr18	49814022	49851059	chr18:49814022-49851059	3	+	49814022	49814022	789624	4	40,89,63,1423,	0,25253,26340,35614,
#Deleted in new
chr18	49814022	49814443	chr18:49814022-49814443	0	+	49814022	49814022	789624	1	421,	0,
#Deleted in new
chr18	49814132	49814276	chr18:49814132-49814276	3	+	49814132	49814132	8553170	1	144,	0,
#Deleted in new
chr18	49814360	49814443	chr18:49814360-49814443	3	+	49814360	49814360	8553170	1	83,	0,
#Partially deleted in new
chr18	49822812	50195093	chr18:49822812-50195093	3	-	49826470	50194793	0	40	3811,81,175,286,151,90,152,144,94,199,78,101,240,66,141,120,146,85,234,240,157,212,112,87,98,153,84,123,141,82,266,110,108,82,144,157,145,172,111,327,	0,12531,13898,14704,16331,18552,20428,24333,26754,30636,34000,40414,41328,49354,52874,54950,56132,57558,72128,79781,81859,83606,89249,106699,113439,114432,130447,131500,139453,140136,151537,157631,161905,167626,169475,178442,214037,217330,232455,371954,
#Partially deleted in new
chr18	49826259	49902833	chr18:49826259-49902833	0	-	49826470	49902833	789624	19	364,81,175,286,151,90,152,144,94,199,101,240,66,141,120,146,85,234,240,	0,9084,10451,11257,12884,15105,16981,20886,23307,27189,36967,37881,45907,49427,51503,52685,54111,68681,76334,
#Partially deleted in new
chr18	49826289	49849846	chr18:49826289-49849846	1	-	49826470	49849591	0	9	334,81,175,286,151,90,152,144,280,	0,9054,10421,11227,12854,15075,16951,20856,23277,
#Deleted in new
chr18	49839866	49840526	chr18:49839866-49840526	1	+	49839866	49839866	8553170	1	660,	0,
#Partially deleted in new
chr18	49863261	49876283	chr18:49863261-49876283	0	-	49863261	49863261	8553170	5	66,240,66,141,48,	0,879,8905,12425,12974,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	49871554	49871666	chr18:49871554-49871666	3	-	49871554	49871554	8553170	1	112,	0,
#Deleted in new
chr18	49877798	49879421	chr18:49877798-49879421	0	-	49877798	49877798	8553170	2	84,477,	0,1146,
#Deleted in new
chr18	49879020	49880496	chr18:49879020-49880496	0	-	49879020	49879020	8553170	2	70,126,	0,1350,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	49946265	49946389	chr18:49946265-49946389	7	-	49946265	49946265	16724991	1	124,	0,
#Deleted in new
chr18	49969720	49970957	chr18:49969720-49970957	3	-	49969720	49969720	8553170	2	259,116,	0,1121,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	50040251	50097620	chr18:50040251-50097620	0	-	50040251	50040251	8553170	3	63,111,377,	0,15016,56992,
#Deleted in new
chr18	50063794	50064440	chr18:50063794-50064440	7	+	50063794	50063794	16724991	1	646,	0,
#Deleted in new
chr18	50098741	50099162	chr18:50098741-50099162	7	+	50098741	50098741	16724991	1	421,	0,
#Deleted in new
chr18	50126498	50126563	chr18:50126498-50126563	3	-	50126498	50126498	5263520	1	65,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	50206997	50207278	chr18:50206997-50207278	3	-	50206997	50206997	8553170	1	281,	0,
#Partially deleted in new
chr18	50227192	50266522	chr18:50227192-50266522	3	-	50227380	50266404	789624	8	417,103,217,219,304,174,230,187,	0,11410,15707,23565,24288,33871,34797,39143,
#Deleted in new
chr18	50256035	50256461	chr18:50256035-50256461	3	-	50256035	50256035	8553170	1	426,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr18	50266881	50281459	chr18:50266881-50281459	1	-	50267587	50279992	0	15	782,62,132,138,300,165,69,117,129,41,83,167,115,135,97,	0,5795,5942,6452,6682,7304,8095,8247,8718,9496,9780,9950,10208,13001,14481,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr18	50266885	50276997	chr18:50266885-50276997	0	-	50267587	50276997	789624	11	778,62,132,300,69,117,75,129,41,83,166,	0,5791,5938,6678,8091,8243,8484,8714,9492,9776,9946,
#Partially deleted in new
chr18	50267516	50281774	chr18:50267516-50281774	3	-	50271500	50279992	0	17	147,72,62,132,138,300,168,69,117,129,147,41,83,167,115,135,412,	0,3952,5160,5307,5817,6047,6669,7460,7612,8083,8318,8861,9145,9315,9573,12366,13846,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr18	50268840	50281476	chr18:50268840-50281476	1	-	50271500	50279992	0	16	978,72,62,132,138,300,168,69,117,129,41,83,167,115,135,114,	0,2628,3836,3983,4493,4723,5345,6136,6288,6759,7537,7821,7991,8249,11042,12522,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr18	50268845	50281769	chr18:50268845-50281769	1	-	50271500	50279992	0	16	2695,62,132,138,300,168,69,117,129,147,41,83,167,115,135,407,	0,3831,3978,4488,4718,5340,6131,6283,6754,6989,7532,7816,7986,8244,11037,12517,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr18	50268846	50281774	chr18:50268846-50281774	1	-	50271500	50279992	0	17	972,72,62,132,138,300,168,69,117,129,147,41,83,167,115,135,412,	0,2622,3830,3977,4487,4717,5339,6130,6282,6753,6988,7531,7815,7985,8243,11036,12516,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr18	50268846	50281774	chr18:50268846-50281774	1	-	50269628	50279992	0	14	972,62,132,300,168,117,129,147,41,83,167,115,135,412,	0,3830,3977,4717,5339,6282,6753,6988,7531,7815,7985,8243,11036,12516,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr18	50268846	50281476	chr18:50268846-50281476	1	-	50270010	50279992	0	14	1239,132,300,168,69,117,129,147,41,83,167,115,135,114,	0,3977,4717,5339,6130,6282,6753,6988,7531,7815,7985,8243,11036,12516,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr18	50268846	50281774	chr18:50268846-50281774	1	-	50271500	50279992	0	16	972,72,62,132,138,300,69,117,129,147,41,83,167,115,135,412,	0,2622,3830,3977,4487,4717,6130,6282,6753,6988,7531,7815,7985,8243,11036,12516,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr18	50269030	50281684	chr18:50269030-50281684	1	-	50269628	50279992	0	16	788,62,132,138,300,168,69,117,129,147,41,83,167,115,135,322,	0,3646,3793,4303,4533,5155,5946,6098,6569,6804,7347,7631,7801,8059,10852,12332,
#Partially deleted in new
chr18	50271041	50280010	chr18:50271041-50280010	1	-	50271500	50279992	789624	15	499,62,108,138,300,69,117,75,129,147,41,83,167,115,128,	0,1635,1806,2292,2522,3935,4087,4328,4558,4793,5336,5620,5790,6048,8841,
#Partially deleted in new
chr18	50271049	50281466	chr18:50271049-50281466	1	-	50271500	50279992	0	17	491,62,132,138,300,168,69,117,75,129,147,41,83,167,115,135,104,	0,1627,1774,2284,2514,3136,3927,4079,4320,4550,4785,5328,5612,5782,6040,8833,10313,
#Partially deleted in new
chr18	50271468	50281500	chr18:50271468-50281500	1	-	50271500	50279992	0	15	72,62,132,138,300,69,117,129,147,41,83,167,115,135,138,	0,1208,1355,1865,2095,3508,3660,4131,4366,4909,5193,5363,5621,8414,9894,
#Partially deleted in new
chr18	50271500	50279992	chr18:50271500-50279992	1	-	50271500	50279992	0	13	40,62,132,300,69,117,129,147,41,83,167,115,110,	0,1176,1323,2063,3476,3628,4099,4334,4877,5161,5331,5589,8382,
#Partially deleted in new
chr18	50271500	50279992	chr18:50271500-50279992	1	-	50271500	50279992	0	13	40,62,132,300,168,117,129,147,41,83,167,115,110,	0,1176,1323,2063,2685,3628,4099,4334,4877,5161,5331,5589,8382,
#Deleted in new
chr18	50272464	50273063	chr18:50272464-50273063	0	-	50272464	50272464	8553170	2	274,240,	0,359,
#Deleted in new
chr18	50273607	50276738	chr18:50273607-50276738	0	-	50273607	50276738	789624	6	256,117,129,147,41,77,	0,1521,1992,2227,2770,3054,
#Deleted in new
chr18	50275128	50275964	chr18:50275128-50275964	0	-	50275128	50275128	8553170	2	117,365,	0,471,
#Deleted in new
chr18	50275156	50276149	chr18:50275156-50276149	0	-	50275156	50275156	8553170	3	89,129,315,	0,443,678,
#Partially deleted in new
chr18	50275650	50281521	chr18:50275650-50281521	0	-	50275650	50275650	8553170	7	78,147,41,337,115,135,159,	0,184,727,1011,1439,4232,5712,
#Partially deleted in new
chr18	50276661	50281441	chr18:50276661-50281441	0	-	50276661	50276661	8553170	4	337,115,142,79,	0,428,3214,4701,
#Partially deleted in new
chr18	50276713	50281671	chr18:50276713-50281671	0	-	50277171	50279992	789624	5	31,167,107,135,309,	0,118,376,3169,4649,
#Deleted in new
chr18	50279745	50281475	chr18:50279745-50281475	0	-	50279745	50279745	8553170	2	272,113,	0,1617,
#Deleted in new
chr18	50282342	50288304	chr18:50282342-50288304	3	-	50282592	50287589	0	15	397,153,97,50,111,208,185,108,246,27,180,236,101,119,718,	0,511,922,1172,1362,1551,2035,2389,2659,2982,3406,3679,4196,4397,5244,
#Deleted in new
chr18	50282342	50287636	chr18:50282342-50287636	1	-	50282592	50287589	0	15	397,153,97,50,111,208,185,120,246,27,180,236,101,119,50,	0,511,922,1172,1362,1551,2035,2377,2659,2982,3406,3679,4196,4397,5244,
#Deleted in new
chr18	50282346	50287651	chr18:50282346-50287651	1	-	50282684	50287589	789624	15	393,153,60,50,111,208,185,108,246,27,180,236,101,119,65,	0,507,918,1168,1358,1547,2031,2385,2655,2978,3402,3675,4192,4393,5240,
#Deleted in new
chr18	50282348	50287115	chr18:50282348-50287115	0	-	50282348	50282348	8553170	13	391,153,97,50,111,208,185,108,246,27,509,101,376,	0,505,916,1166,1356,1545,2029,2383,2653,2976,3400,4190,4391,
#Deleted in new
chr18	50282532	50283448	chr18:50282532-50283448	0	-	50282532	50282532	8553170	2	207,595,	0,321,
#Deleted in new
chr18	50282579	50283427	chr18:50282579-50283427	0	-	50282579	50282579	8553170	3	160,153,163,	0,274,685,
#Deleted in new
chr18	50282906	50283791	chr18:50282906-50283791	0	-	50282906	50282906	8553170	3	100,97,277,	0,358,608,
#Deleted in new
chr18	50283079	50284023	chr18:50283079-50284023	0	-	50283079	50283079	8553170	2	736,130,	0,814,
#Deleted in new
chr18	50283105	50283799	chr18:50283105-50283799	0	-	50283105	50283105	8553170	2	256,285,	0,409,
#Deleted in new
chr18	50283652	50285043	chr18:50283652-50285043	0	-	50283652	50283652	8553170	4	449,185,108,42,	0,725,1079,1349,
#Deleted in new
chr18	50284384	50286330	chr18:50284384-50286330	0	-	50284384	50284384	8553170	5	178,108,246,180,309,	0,347,617,1364,1637,
#Deleted in new
chr18	50284388	50287684	chr18:50284388-50287684	0	-	50284388	50287589	789624	6	174,120,246,27,180,98,	0,331,613,936,1360,3198,
#Deleted in new
chr18	50284428	50285445	chr18:50284428-50285445	0	-	50284428	50284428	8553170	3	134,108,444,	0,303,573,
#Deleted in new
chr18	50285128	50287680	chr18:50285128-50287680	0	-	50285128	50287589	789624	6	119,180,236,101,119,94,	0,620,893,1410,1611,2458,
#Deleted in new
chr18	50285220	50287570	chr18:50285220-50287570	0	-	50285220	50287425	789624	7	27,27,180,236,101,119,148,	0,104,528,801,1318,1519,2202,
#Deleted in new
chr18	50285803	50287701	chr18:50285803-50287701	0	-	50285803	50285803	8553170	4	454,101,119,115,	0,735,936,1783,
#Deleted in new
chr18	50286180	50287679	chr18:50286180-50287679	0	-	50286180	50286180	8553170	5	77,101,119,86,93,	0,358,559,1242,1406,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	50302189	50313595	chr18:50302189-50313595	3	+	50302189	50302189	8553170	2	43,395,	0,11011,
#Deleted in new
chr18	50318419	50319024	chr18:50318419-50319024	7	+	50318419	50318419	16724991	1	605,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	50319001	50319120	chr18:50319001-50319120	7	+	50319001	50319001	16724991	1	119,	0,
#Duplicated in new
chr18	50374994	50394173	chr18:50374994-50394173	3	+	50375830	50392247	0	7	200,99,125,98,138,170,2075,	0,825,5131,7134,10221,16129,17104,
#Partially deleted in new
chr18	50375039	50392247	chr18:50375039-50392247	1	+	50375830	50392247	0	7	200,99,125,98,138,170,149,	0,780,5086,7089,10176,16084,17059,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	50375042	50392549	chr18:50375042-50392549	1	+	50375830	50392247	0	6	152,99,125,98,170,451,	0,777,5083,7086,16081,17056,
#Partially deleted in new
chr18	50375045	50392251	chr18:50375045-50392251	1	+	50391127	50392247	789624	5	149,99,98,170,153,	0,774,7083,16078,17053,
#Partially deleted in new
chr18	50375060	50392160	chr18:50375060-50392160	0	+	50385312	50392160	789624	6	179,99,98,138,170,62,	0,759,7068,10155,16063,17038,
#Deleted in new
chr18	50457886	50458795	chr18:50457886-50458795	7	+	50457886	50457886	16724991	1	909,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	50560077	50731824	chr18:50560077-50731824	3	+	50663958	50729854	789624	6	166,1416,145,162,214,2667,	0,103011,155001,161860,165884,169080,
#Partially deleted in new
chr18	50560132	50730101	chr18:50560132-50730101	1	+	50715165	50729854	789624	5	111,145,162,214,944,	0,154946,161805,165829,169025,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	50560141	50731824	chr18:50560141-50731824	1	+	50663958	50729168	789624	4	102,1416,145,2667,	0,102947,154937,169016,
#Partially deleted in new
chr18	50560641	50706139	chr18:50560641-50706139	1	+	50663958	50704829	789624	3	118,1416,1610,	0,102447,143888,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	50629417	50663199	chr18:50629417-50663199	0	+	50629417	50629417	8553170	2	461,111,	0,33671,
#Partially deleted in new
chr18	50664298	50669842	chr18:50664298-50669842	0	+	50664298	50664298	8553170	2	206,642,	0,4902,
#Partially deleted in new
chr18	50669509	50670215	chr18:50669509-50670215	7	+	50669509	50669509	16724991	2	367,31,	0,675,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	50795119	50825384	chr18:50795119-50825384	3	-	50799336	50809400	789624	8	4271,108,156,183,147,103,122,76,	0,4916,6229,10034,11584,14182,24461,30189,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	50795120	50820064	chr18:50795120-50820064	1	-	50799336	50809400	789624	8	4270,108,156,183,147,103,122,168,	0,4915,6228,10033,11583,14181,24460,24776,
#Partially deleted in new
chr18	50798203	50820019	chr18:50798203-50820019	0	-	50806761	50819915	789624	8	1187,108,156,183,147,103,122,123,	0,1832,3145,6950,8500,11098,21377,21693,
#Partially deleted in new
chr18	50798376	50825402	chr18:50798376-50825402	1	-	50799336	50809400	789624	9	1014,108,156,183,147,103,39,122,94,	0,1659,2972,6777,8327,10925,17747,21204,26932,
#Partially deleted in new
chr18	50798461	50820064	chr18:50798461-50820064	1	-	50799336	50819915	789624	6	929,108,183,147,122,168,	0,1574,6692,8242,21119,21435,
#Partially deleted in new
chr18	50799137	50825380	chr18:50799137-50825380	1	-	50799336	50809400	789624	6	253,108,183,147,103,72,	0,898,6016,7566,10164,26171,
#Partially deleted in new
chr18	50799149	50820064	chr18:50799149-50820064	1	-	50799336	50819915	789624	7	241,108,156,183,147,122,168,	0,886,2199,6004,7554,20431,20747,
#Partially deleted in new
chr18	50799290	50819928	chr18:50799290-50819928	1	-	50799336	50809400	789624	8	100,108,156,183,147,103,122,32,	0,745,2058,5863,7413,10011,20290,20606,
#Partially deleted in new
chr18	50800035	50819836	chr18:50800035-50819836	0	-	50800035	50809400	789624	5	108,183,147,103,256,	0,5118,6668,9266,19545,
#Partially deleted in new
chr18	50800046	50819626	chr18:50800046-50819626	0	-	50800046	50800046	8553170	4	97,156,183,46,	0,1302,5107,19534,
#Partially deleted in new
chr18	50800046	50820013	chr18:50800046-50820013	0	-	50806741	50809400	789624	5	97,183,83,103,117,	0,5107,6657,9255,19850,
#Partially deleted in new
chr18	50814391	50815730	chr18:50814391-50815730	7	+	50814391	50814391	16724991	2	385,631,	0,708,
#Deleted in new
chr18	50823576	50824120	chr18:50823576-50824120	7	+	50823576	50823576	16724991	1	544,	0,
#Duplicated in new
chr18	50878733	50954257	chr18:50878733-50954257	3	+	50895820	50947184	0	16	575,120,134,150,76,162,104,110,98,114,115,143,103,71,99,7241,	0,17075,29329,34067,37434,38613,39376,41722,41927,42340,45364,47022,53524,60836,61554,68283,
#Partially deleted in new
chr18	50879079	50947852	chr18:50879079-50947852	0	+	50895820	50918119	789624	14	229,120,134,150,104,110,98,114,115,143,103,71,99,836,	0,16729,28983,33721,39030,41376,41581,41994,45018,46676,53178,60490,61208,67937,
#Partially deleted in new
chr18	50879116	50947865	chr18:50879116-50947865	0	+	50895820	50940313	789624	15	192,120,134,150,76,162,104,110,98,114,115,143,103,99,849,	0,16692,28946,33684,37051,38230,38993,41339,41544,41957,44981,46639,53141,61171,67900,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr18	50879118	50947575	chr18:50879118-50947575	1	+	50895820	50945248	789624	17	190,120,134,150,76,162,104,110,98,114,115,143,103,71,99,123,559,	0,16690,28944,33682,37049,38228,38991,41337,41542,41955,44979,46637,53139,60451,61169,66019,67898,
#Partially deleted in new
chr18	50879119	50947890	chr18:50879119-50947890	1	+	50895820	50947039	0	14	189,120,134,150,76,162,104,110,98,114,115,143,103,874,	0,16689,28943,33681,37048,38227,38990,41336,41541,41954,44978,46636,53138,67897,
#Partially deleted in new
chr18	50879154	50947708	chr18:50879154-50947708	1	+	50895820	50947184	789624	15	154,120,134,150,76,162,104,110,98,115,143,103,71,99,692,	0,16654,28908,33646,37013,38192,38955,41301,41506,44943,46601,53103,60415,61133,67862,
#Partially deleted in new
chr18	50879156	50947546	chr18:50879156-50947546	0	+	50908065	50940313	789624	14	152,134,150,76,162,104,110,98,114,115,143,103,99,530,	0,28906,33644,37011,38190,38953,41299,41504,41917,44941,46599,53101,61131,67860,
#Partially deleted in new
chr18	50879160	50947784	chr18:50879160-50947784	0	+	50895820	50918119	789624	13	148,120,134,104,110,98,114,115,143,103,71,99,768,	0,16648,28902,38949,41295,41500,41913,44937,46595,53097,60409,61127,67856,
#Partially deleted in new
chr18	50879165	50947526	chr18:50879165-50947526	1	+	50895820	50942723	789624	17	143,120,134,150,76,162,104,110,98,114,115,143,103,71,99,37,510,	0,16643,28897,33635,37002,38181,38944,41290,41495,41908,44932,46590,53092,60404,61122,63534,67851,
#Partially deleted in new
chr18	50879165	50947874	chr18:50879165-50947874	0	+	50895820	50917356	789624	15	143,120,134,150,162,104,110,98,114,115,143,103,71,99,858,	0,16643,28897,33635,38181,38944,41290,41495,41908,44932,46590,53092,60404,61122,67851,
#Partially deleted in new
chr18	50879165	50947698	chr18:50879165-50947698	1	+	50895820	50947184	789624	15	143,120,134,150,76,104,110,98,114,115,143,103,71,99,682,	0,16643,28897,33635,37002,38944,41290,41495,41908,44932,46590,53092,60404,61122,67851,
#Partially deleted in new
chr18	50879170	50947875	chr18:50879170-50947875	1	+	50908065	50947184	789624	15	138,134,150,76,162,104,110,98,114,115,143,103,71,99,859,	0,28892,33630,36997,38176,38939,41285,41490,41903,44927,46585,53087,60399,61117,67846,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr18	50879227	50935270	chr18:50879227-50935270	0	+	50895820	50917356	789624	12	81,120,134,150,162,104,110,98,114,115,143,3013,	0,16581,28835,33573,38119,38882,41228,41433,41846,44870,46528,53030,
#Partially deleted in new
chr18	50895824	50947023	chr18:50895824-50947023	0	+	50895824	50918119	789624	12	104,134,150,104,110,98,114,115,143,103,99,7,	0,12238,16976,22285,24631,24836,25249,28273,29931,36433,44463,51192,
#Partially deleted in new
chr18	50895846	50913266	chr18:50895846-50913266	0	+	50895846	50895846	8553170	3	82,134,466,	0,12216,16954,
#Partially deleted in new
chr18	50908188	50947602	chr18:50908188-50947602	0	+	50908188	50917356	789624	12	8,150,162,104,110,98,114,115,143,103,99,586,	0,4612,9158,9921,12267,12472,12885,15909,17567,24069,32099,38828,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	50915391	50935575	chr18:50915391-50935575	0	+	50915391	50915391	8553170	9	852,162,104,110,98,114,115,143,3318,	0,1955,2718,5064,5269,5682,8706,10364,16866,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	50915898	50935733	chr18:50915898-50935733	0	+	50915898	50915898	8553170	8	1610,104,110,98,114,115,143,3476,	0,2211,4557,4762,5175,8199,9857,16359,
#Partially deleted in new
chr18	50939116	50947838	chr18:50939116-50947838	0	+	50939116	50939116	8553170	2	1270,822,	0,7900,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	50959266	50959379	chr18:50959266-50959379	3	-	50959266	50959266	8553170	1	113,	0,
#Partially deleted in new
chr18	50967990	50986946	chr18:50967990-50986946	1	+	50974404	50986651	789624	4	124,165,77,328,	0,6406,16496,18628,
#Partially deleted in new
chr18	50968015	50988121	chr18:50968015-50988121	3	+	50974404	50987085	0	4	99,165,468,1503,	0,6381,16080,18603,
#Partially deleted in new
chr18	50968018	51058144	chr18:50968018-51058144	3	+	50974404	51047023	789624	9	96,165,376,175,30,62,91,213,20,	0,6378,78901,80667,81276,83335,84616,86762,90106,
#Partially deleted in new
chr18	50968022	51047111	chr18:50968022-51047111	0	+	50968022	50968022	8553170	4	92,165,77,192,	0,6374,16464,78897,
#Deleted in new
chr18	50968044	50969866	chr18:50968044-50969866	0	+	50968044	50968044	8553170	2	70,1435,	0,387,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	50968047	50984838	chr18:50968047-50984838	1	+	50974404	50984610	789624	3	67,165,743,	0,6349,16048,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	51028393	51048816	chr18:51028393-51048816	0	+	51047046	51048816	789624	3	272,376,131,	0,18526,20292,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr18	51029613	51085045	chr18:51029613-51085045	3	+	51047046	51078467	0	12	131,376,175,30,213,120,117,51,184,169,139,6790,	0,17306,19072,19681,25167,28511,28726,30252,35809,37405,47024,48642,
#Partially deleted in new
chr18	51030099	51048708	chr18:51030099-51048708	0	+	51047046	51048708	789624	3	177,376,23,	0,16820,18586,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr18	51030212	51085039	chr18:51030212-51085039	1	+	51047046	51078467	0	12	411,376,175,30,213,120,117,51,184,169,139,6784,	0,16707,18473,19082,24568,27912,28127,29653,35210,36806,46425,48043,
#Partially deleted in new
chr18	51030212	51048857	chr18:51030212-51048857	0	+	51047046	51048857	789624	3	64,308,172,	0,16775,18473,
#Partially deleted in new
chr18	51030212	51049324	chr18:51030212-51049324	0	+	51047046	51049324	789624	4	411,376,175,30,	0,16707,18473,19082,
#Partially deleted in new
chr18	51030596	51058154	chr18:51030596-51058154	0	+	51030596	51030596	8553170	5	27,175,30,213,30,	0,18089,18698,24184,27528,
#Partially deleted in new
chr18	51044958	51048798	chr18:51044958-51048798	0	+	51047046	51048798	789624	3	93,376,113,	0,1961,3727,
#Partially deleted in new
chr18	51047046	51078467	chr18:51047046-51078467	1	+	51047046	51078467	789624	8	249,175,30,213,184,169,139,212,	0,1639,2248,7734,18376,19972,29591,31209,
#Partially deleted in new
chr18	51047046	51078467	chr18:51047046-51078467	0	+	51047046	51076645	789624	9	249,175,30,213,120,117,51,139,212,	0,1639,2248,7734,11078,11293,12819,29591,31209,
#Partially deleted in new
chr18	51047178	51049565	chr18:51047178-51049565	0	+	51047178	51047178	8553170	3	117,175,271,	0,1507,2116,
#Partially deleted in new
chr18	51051092	51054916	chr18:51051092-51054916	0	+	51051092	51051092	8553170	2	323,136,	0,3688,
#Partially deleted in new
chr18	51052325	51079777	chr18:51052325-51079777	0	+	51052325	51052325	8553170	8	2668,120,117,51,184,169,139,1522,	0,5799,6014,7540,13097,14693,24312,25930,
#Partially deleted in new
chr18	51058352	51079143	chr18:51058352-51079143	0	+	51058352	51077320	789624	7	104,51,184,169,139,113,888,	0,1513,7070,8666,18285,18954,19903,
#Partially deleted in new
chr18	51066821	51077291	chr18:51066821-51077291	0	+	51066821	51066821	8553170	3	366,139,40,	0,9816,10430,
#Partially deleted in new
chr18	51067112	51077130	chr18:51067112-51077130	0	+	51067112	51076811	789624	2	75,493,	0,9525,
#Deleted in new
chr18	51077250	51078870	chr18:51077250-51078870	0	+	51077250	51077250	8553170	2	169,615,	0,1005,
#Partially deleted in new
chr18	51158281	51159383	chr18:51158281-51159383	7	-	51158281	51158281	16724991	2	145,619,	0,483,
#Partially deleted in new
chr18	51174549	51197320	chr18:51174549-51197320	2	-	51176350	51197320	0	2	3027,754,	0,22017,
#Partially deleted in new
chr18	51174551	51197320	chr18:51174551-51197320	1	-	51176350	51197320	789624	3	3025,211,33,	0,22015,22736,
#Partially deleted in new
chr18	51176820	51218304	chr18:51176820-51218304	0	-	51176820	51176820	8553170	2	756,43,	0,41441,
#Deleted in new
chr18	51192909	51196759	chr18:51192909-51196759	0	-	51196411	51196759	789624	1	3850,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	51283732	51283896	chr18:51283732-51283896	3	-	51283732	51283732	8553170	1	164,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	51392041	51468378	chr18:51392041-51468378	1	+	51392041	51392041	789624	2	216,2972,	0,73365,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	51392041	51562569	chr18:51392041-51562569	0	+	51392041	51392041	8553170	3	216,294,53,	0,168551,170475,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	51392041	51560629	chr18:51392041-51560629	2	+	51392041	51392041	8553170	5	216,121,31,166,37,	0,132920,138323,140070,168551,
#Partially deleted in new
chr18	51421062	51421674	chr18:51421062-51421674	7	-	51421062	51421062	16724991	2	186,49,	0,563,
#Deleted in new
chr18	51433436	51434783	chr18:51433436-51434783	7	+	51433436	51433436	16724991	1	1347,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	51612638	51613110	chr18:51612638-51613110	7	-	51612638	51612638	16724991	1	472,	0,
#Deleted in new
chr18	51687524	51688209	chr18:51687524-51688209	7	-	51687524	51687524	16724991	1	685,	0,
#Deleted in new
chr18	51845006	51845628	chr18:51845006-51845628	7	-	51845006	51845006	16724991	1	622,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	52283908	52309224	chr18:52283908-52309224	3	+	52283908	52283908	8553170	3	1406,55,717,	0,10000,24599,
#Partially deleted in new
chr18	52336360	52339025	chr18:52336360-52339025	3	-	52336360	52336360	8553170	2	136,578,	0,2087,
#Partially deleted in new
chr18	52340171	53535899	chr18:52340171-53535899	3	+	52340787	53530653	0	29	707,321,285,151,137,155,121,157,155,149,139,50,142,111,195,96,233,139,108,195,33,66,163,227,117,162,213,143,5336,	0,411882,565872,583535,585062,723133,725874,817184,838790,865044,867507,875376,965406,981875,999541,1045871,1051483,1057136,1062614,1070280,1075952,1094972,1110328,1119060,1127722,1146625,1159126,1186445,1190392,
#Deleted in new
chr18	52409041	52409257	chr18:52409041-52409257	3	+	52409041	52409041	8553170	1	216,	0,
#Deleted in new
chr18	52419188	52419644	chr18:52419188-52419644	7	-	52419188	52419188	16724991	1	456,	0,
#Partially deleted in new
chr18	52752031	53535903	chr18:52752031-53535903	1	+	52752031	53530653	789624	28	343,285,151,137,155,121,157,155,149,139,50,142,111,195,96,233,139,108,195,33,66,163,227,117,162,213,143,5340,	0,154012,171675,173202,311273,314014,405324,426930,453184,455647,463516,553546,570015,587681,634011,639623,645276,650754,658420,664092,683112,698468,707200,715862,734765,747266,774585,778532,
#Partially deleted in new
chr18	52752059	52759092	chr18:52752059-52759092	0	+	52752059	52759016	789624	2	315,306,	0,6727,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	52752158	52906267	chr18:52752158-52906267	0	+	52752158	52752158	8553170	3	216,109,224,	0,65931,153885,
#Partially deleted in new
chr18	52752160	52816889	chr18:52752160-52816889	0	+	52752160	52816686	789624	2	214,256,	0,64473,
#Partially deleted in new
chr18	52752161	53416557	chr18:52752161-53416557	0	+	52752161	53397369	789624	19	213,285,151,137,155,121,157,155,149,139,50,142,111,195,96,139,108,195,434,	0,153882,171545,173072,311143,313884,405194,426800,453054,455517,463386,553416,569885,587551,633881,645146,650624,658290,663962,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	52752165	52906286	chr18:52752165-52906286	0	+	52752165	52809312	789624	3	209,124,243,	0,57133,153878,
#Partially deleted in new
chr18	52752166	52906256	chr18:52752166-52906256	0	+	52752166	52892412	789624	3	208,125,213,	0,140241,153877,
#Partially deleted in new
chr18	52752173	52757281	chr18:52752173-52757281	0	+	52752173	52752173	8553170	2	201,317,	0,4791,
#Partially deleted in new
chr18	52752229	52754256	chr18:52752229-52754256	0	+	52752229	52752229	8553170	2	145,177,	0,1850,
#Partially deleted in new
chr18	52923783	52931950	chr18:52923783-52931950	0	+	52923783	52923783	8553170	3	74,137,163,	0,1450,8004,
#Partially deleted in new
chr18	52923798	53063613	chr18:52923798-53063613	0	+	52923798	52923798	8553170	3	59,137,309,	0,1435,139506,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr18	52934771	53530592	chr18:52934771-53530592	1	+	53063354	53530571	789624	27	119,96,155,121,157,155,149,139,50,142,111,195,96,173,139,108,195,33,66,163,227,117,156,213,143,70,29,	0,30259,128533,131274,222584,244190,270444,272907,280776,370806,387275,404941,451271,456943,462536,468014,475680,481352,500372,515728,524460,533122,552025,564526,591845,595575,595792,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	52934802	53157435	chr18:52934802-53157435	0	+	53063354	53157435	789624	4	88,155,121,80,	0,128502,131243,222553,
#Partially deleted in new
chr18	52940928	53157406	chr18:52940928-53157406	0	+	52940928	52940928	8553170	4	237,155,121,51,	0,122376,125117,216427,
#Deleted in new
chr18	53237100	53237190	chr18:53237100-53237190	3	+	53237100	53237100	5263520	1	90,	0,
#Partially deleted in new
chr18	53391783	53416441	chr18:53391783-53416441	0	+	53391783	53416317	789624	6	104,139,108,195,33,171,	0,5524,11002,18668,24340,24487,
#Partially deleted in new
chr18	53480834	53568283	chr18:53480834-53568283	0	-	53480834	53480834	8553170	3	239,98,120,	0,24388,87329,
#Partially deleted in new
chr18	53480834	53581091	chr18:53480834-53581091	3	-	53480834	53480834	8553170	6	239,98,43,147,102,68,	0,24388,52515,54462,99577,100189,
#Partially deleted in new
chr18	53499314	53526948	chr18:53499314-53526948	0	+	53499314	53499314	8553170	2	196,332,	0,27302,
#Partially deleted in new
chr18	53530296	53530451	chr18:53530296-53530451	0	+	53530296	53530296	8553170	1	155,	0,
#Partially deleted in new
chr18	53568446	53597851	chr18:53568446-53597851	1	+	53568446	53568446	789624	6	104,49,113,164,79,59,	0,9626,14147,15739,26358,29346,
#Partially deleted in new
chr18	53568470	53577722	chr18:53568470-53577722	1	+	53568470	53568470	8553170	2	80,304,	0,8948,
#Partially deleted in new
chr18	53568482	53588751	chr18:53568482-53588751	3	+	53568482	53568482	8553170	5	68,49,113,164,204,	0,9590,14111,15703,20065,
#Partially deleted in new
chr18	53579622	53581059	chr18:53579622-53581059	1	-	53579622	53579622	789624	2	389,648,	0,789,
#Partially deleted in new
chr18	53605253	53605725	chr18:53605253-53605725	7	-	53605253	53605253	16724991	1	472,	0,
#Deleted in new
chr18	54142132	54142577	chr18:54142132-54142577	7	+	54142132	54142132	16724991	1	445,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	54151600	54224788	chr18:54151600-54224788	3	-	54159776	54224559	0	7	3711,139,178,91,138,160,771,	0,8164,12922,14475,37273,53397,72417,
#Partially deleted in new
chr18	54155253	54160113	chr18:54155253-54160113	0	-	54155253	54155253	8553170	3	58,139,44,	0,4511,4816,
#Partially deleted in new
chr18	54159757	54205021	chr18:54159757-54205021	0	-	54187780	54205021	789624	6	146,178,91,124,138,24,	0,4765,6318,27956,29116,45240,
#Partially deleted in new
chr18	54202679	54224647	chr18:54202679-54224647	1	-	54203102	54224559	789624	3	447,160,630,	0,2318,21338,
#Partially deleted in new
chr18	54202680	54224617	chr18:54202680-54224617	1	-	54202895	54224559	0	3	422,160,600,	0,2317,21337,
#Deleted in new
chr18	54222283	54222412	chr18:54222283-54222412	3	-	54222283	54222283	789624	1	129,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	54268345	54270028	chr18:54268345-54270028	3	-	54268345	54268345	8553170	1	1683,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	54269403	54298234	chr18:54269403-54298234	3	+	54269546	54294467	0	10	258,126,165,153,237,179,92,131,206,4586,	0,1956,4522,8299,11263,13433,14518,17877,22429,24245,
#Partially deleted in new
chr18	54269518	54294483	chr18:54269518-54294483	1	+	54269546	54294467	789624	9	143,126,165,153,179,92,131,206,835,	0,1841,4407,8184,13318,14403,17762,22314,24130,
#Partially deleted in new
chr18	54269550	54280822	chr18:54269550-54280822	0	+	54269550	54280822	789624	4	111,165,153,156,	0,4375,8152,11116,
#Partially deleted in new
chr18	54269566	54294724	chr18:54269566-54294724	1	+	54273993	54294467	789624	9	466,165,153,237,179,92,131,206,1076,	0,4359,8136,11100,13270,14355,17714,22266,24082,
#Partially deleted in new
chr18	54269584	54282911	chr18:54269584-54282911	0	+	54271448	54282911	789624	6	448,126,165,153,237,75,	0,1775,4341,8118,11082,13252,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	54269591	54282923	chr18:54269591-54282923	0	+	54269591	54269591	8553170	5	1894,165,153,237,87,	0,4334,8111,11075,13245,
#Partially deleted in new
chr18	54271361	54294719	chr18:54271361-54294719	0	+	54271361	54294467	789624	9	124,165,84,237,179,92,131,206,1071,	0,2564,6410,9305,11475,12560,15919,20471,22287,
#Partially deleted in new
chr18	54272169	54280852	chr18:54272169-54280852	0	+	54273993	54280852	789624	4	73,165,153,186,	0,1756,5533,8497,
#Partially deleted in new
chr18	54274896	54282857	chr18:54274896-54282857	0	+	54274896	54274896	8553170	4	132,153,237,21,	0,2806,5770,7940,
#Partially deleted in new
chr18	54282853	54293759	chr18:54282853-54293759	0	+	54282853	54284017	789624	5	162,144,131,206,111,	0,1068,4427,8979,10795,
#Partially deleted in new
chr18	54282859	54294724	chr18:54282859-54294724	0	+	54282859	54283745	789624	6	156,73,92,131,206,1076,	0,883,1062,4421,8973,10789,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	54282905	54321266	chr18:54282905-54321266	0	+	54282905	54320367	789624	5	110,92,131,120,201,	0,1016,4375,37367,38160,
#Partially deleted in new
chr18	54283767	54293851	chr18:54283767-54293851	0	+	54283767	54283767	8553170	4	246,131,206,203,	0,3513,8065,9881,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	54283849	54287708	chr18:54283849-54287708	0	+	54283849	54283849	8553170	2	164,428,	0,3431,
#Partially deleted in new
chr18	54284603	54293775	chr18:54284603-54293775	0	+	54284603	54284603	8553170	4	119,131,206,127,	0,2677,7229,9045,
#Deleted in new
chr18	54291365	54293776	chr18:54291365-54293776	0	+	54291365	54291365	8553170	2	673,128,	0,2283,
#Partially deleted in new
chr18	54324357	54357964	chr18:54324357-54357964	3	-	54324691	54354573	0	9	518,94,118,127,50,94,84,113,173,	0,4989,7384,12767,29696,30126,32003,32697,33434,
#Partially deleted in new
chr18	54324691	54354573	chr18:54324691-54354573	1	-	54324691	54354573	0	6	184,94,118,127,50,90,	0,4655,7050,12433,29362,29792,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	54353926	54357848	chr18:54353926-54357848	1	-	54354249	54354573	789624	4	461,94,84,57,	0,557,2434,3865,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	54354054	54357860	chr18:54354054-54357860	1	-	54354249	54354573	789624	5	333,94,80,84,69,	0,429,1716,2306,3737,
#Partially deleted in new
chr18	54357916	54378434	chr18:54357916-54378434	1	+	54362844	54378246	789624	6	58,151,103,132,71,261,	0,4854,7802,14549,16297,20257,
#Partially deleted in new
chr18	54357916	54382035	chr18:54357916-54382035	3	+	54360572	54378246	789624	9	159,97,329,789,151,103,132,71,3862,	0,857,2610,3726,4854,7802,14549,16297,20257,
#Partially deleted in new
chr18	54358481	54378845	chr18:54358481-54378845	1	+	54360572	54378246	789624	8	389,329,249,151,103,132,71,672,	0,2045,3161,4289,7237,13984,15732,19692,
#Partially deleted in new
chr18	54358584	54382032	chr18:54358584-54382032	1	+	54360572	54378246	789624	8	286,329,306,151,103,132,71,3859,	0,1942,3058,4186,7134,13881,15629,19589,
#Partially deleted in new
chr18	54358584	54380368	chr18:54358584-54380368	1	+	54360572	54378246	789624	8	286,329,789,151,103,132,71,2195,	0,1942,3058,4186,7134,13881,15629,19589,
#Partially deleted in new
chr18	54363903	54378251	chr18:54363903-54378251	0	+	54363903	54363903	8553170	5	78,103,132,71,78,	0,1815,8562,10310,14270,
#Deleted in new
chr18	54406888	54407114	chr18:54406888-54407114	7	-	54406888	54406888	16724991	1	226,	0,
#Partially deleted in new
chr18	54412762	54424632	chr18:54412762-54424632	7	+	54412762	54412762	16724991	7	84,226,207,233,139,133,135,	0,2473,3188,6065,7112,8660,11735,
#Deleted in new
chr18	54525433	54525563	chr18:54525433-54525563	7	+	54525433	54525433	16724991	1	130,	0,
#Deleted in new
chr18	54566996	54567303	chr18:54566996-54567303	7	+	54566996	54566996	16724991	1	307,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	54587756	54598679	chr18:54587756-54598679	1	+	54587847	54598145	789624	3	110,125,867,	0,3458,10056,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	54591158	54599493	chr18:54591158-54599493	3	+	54591204	54598145	789624	3	181,165,1681,	0,3780,6654,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	54591158	54599493	chr18:54591158-54599493	1	+	54591282	54598145	789624	3	181,165,1681,	0,3780,6654,
#Partially deleted in new
chr18	54717859	54884355	chr18:54717859-54884355	0	+	54877585	54884355	789624	5	76,75,172,86,23,	0,207,159707,161509,166473,
#Deleted in new
chr18	54744749	54745581	chr18:54744749-54745581	7	+	54744749	54744749	16724991	1	832,	0,
#Partially deleted in new
chr18	54828198	54895516	chr18:54828198-54895516	3	+	54877585	54889413	0	6	502,172,86,104,124,6293,	0,49368,51170,56134,59796,61025,
#Partially deleted in new
chr18	54828480	54888113	chr18:54828480-54888113	0	+	54828480	54828480	8553170	4	220,172,86,119,	0,49086,50888,59514,
#Deleted in new
chr18	54879456	54880809	chr18:54879456-54880809	3	+	54879456	54879456	8553170	2	514,586,	0,767,
#Partially deleted in new
chr18	54884356	54893301	chr18:54884356-54893301	0	+	54884356	54893272	789624	4	80,124,65,154,	0,3638,8635,8791,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr18	54901508	54959508	chr18:54901508-54959508	3	-	54904357	54942791	789624	12	2907,77,84,106,83,129,126,141,87,129,90,173,	0,6277,16404,17762,27291,33311,35324,36448,39488,41166,43879,57827,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	54901510	54942950	chr18:54901510-54942950	1	-	54904357	54942791	789624	10	2905,77,84,106,83,129,126,141,87,276,	0,6275,16402,17760,27289,33309,35322,36446,39486,41164,
#Partially deleted in new
chr18	54903319	54936905	chr18:54903319-54936905	0	-	54904357	54936905	789624	8	63,93,77,84,106,83,129,73,	0,1003,4466,14593,15951,25480,31500,33513,
#Partially deleted in new
chr18	54904080	54958048	chr18:54904080-54958048	1	-	54904357	54942791	789624	12	335,77,84,106,83,129,126,141,87,125,90,74,	0,3705,13832,15190,24719,30739,32752,33876,36916,38594,41307,53894,
#Partially deleted in new
chr18	54928875	54937277	chr18:54928875-54937277	0	-	54928875	54928875	8553170	3	7,129,445,	0,5944,7957,
#Partially deleted in new
chr18	54937601	54959461	chr18:54937601-54959461	0	-	54937601	54937601	8553170	5	496,87,129,90,279,	0,3395,5073,7786,21581,
#Deleted in new
chr18	54954402	54954732	chr18:54954402-54954732	7	+	54954402	54954402	16724991	1	330,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	55105903	55124306	chr18:55105903-55124306	3	-	55105903	55105903	789624	3	2750,130,187,	0,11050,18216,
#Partially deleted in new
chr18	55108310	55119598	chr18:55108310-55119598	0	-	55108310	55108310	8553170	3	343,130,103,	0,8643,11185,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	55146545	55146645	chr18:55146545-55146645	7	-	55146545	55146545	16724991	1	100,	0,
#Partially deleted in new
chr18	55222330	55588629	chr18:55222330-55588629	1	-	55228224	55585352	0	18	5700,141,230,151,136,204,77,79,68,133,134,106,65,97,62,73,92,592,	0,5890,6516,10190,12217,32166,34984,37618,39135,47500,53288,57220,181123,238688,241745,362949,364714,365707,
#Partially deleted in new
chr18	55222333	55588629	chr18:55222333-55588629	3	-	55228224	55587116	0	20	5697,141,230,151,136,204,77,79,68,133,134,106,50,130,65,97,62,73,92,592,	0,5887,6513,10187,12214,32163,34981,37615,39132,47497,53285,57217,128025,128540,181120,238685,241742,362946,364711,365704,
#Partially deleted in new
chr18	55222333	55589778	chr18:55222333-55589778	1	-	55228224	55585352	0	20	5697,141,230,163,136,204,77,79,68,133,134,106,50,130,65,97,62,73,216,482,	0,5887,6513,10175,12214,32163,34981,37615,39132,47497,53285,57217,128025,128540,181120,238685,241742,362946,364587,366963,
#Partially deleted in new
chr18	55222333	55352023	chr18:55222333-55352023	1	-	55228224	55350982	789624	15	5697,141,230,163,136,204,77,79,68,133,134,106,50,130,229,	0,5887,6513,10175,12214,32163,34981,37615,39132,47497,53285,57217,128025,128540,129461,
#Partially deleted in new
chr18	55222334	55588226	chr18:55222334-55588226	1	-	55228224	55587116	789624	20	5696,141,230,43,136,204,77,79,68,133,134,106,50,130,65,97,62,73,92,189,	0,5886,6512,12082,12213,32162,34980,37614,39131,47496,53284,57216,128024,128539,181119,238684,241741,362945,364710,365703,
#Partially deleted in new
chr18	55222334	55351316	chr18:55222334-55351316	0	-	55222334	55222334	8553170	15	5696,141,230,163,136,204,77,79,68,133,134,106,50,130,49,	0,5886,6512,10174,12213,32162,34980,37614,39131,47496,53284,57216,128024,128539,128933,
#Partially deleted in new
chr18	55222334	55589846	chr18:55222334-55589846	0	-	55401765	55585352	789624	20	5696,141,230,163,136,204,77,79,68,133,134,106,50,130,89,65,97,62,73,550,	0,5886,6512,10174,12213,32162,34980,37614,39131,47496,53284,57216,128024,128539,179354,181119,238684,241741,362945,366962,
#Partially deleted in new
chr18	55222334	55384196	chr18:55222334-55384196	1	-	55228224	55350982	789624	15	5696,141,230,163,136,204,77,79,68,133,134,106,50,130,293,	0,5886,6512,10174,12213,32162,34980,37614,39131,47496,53284,57216,128024,128539,161569,
#Partially deleted in new
chr18	55222334	55588153	chr18:55222334-55588153	0	-	55519016	55587116	789624	21	5696,141,230,151,136,204,77,79,68,133,134,106,50,130,65,97,62,43,73,92,116,	0,5886,6512,10186,12213,32162,34980,37614,39131,47496,53284,57216,128024,128539,181119,238684,241741,296647,362945,364710,365703,
#Partially deleted in new
chr18	55222334	55321640	chr18:55222334-55321640	1	-	55228224	55279557	789624	13	5696,141,230,163,136,204,77,79,68,133,134,106,386,	0,5886,6512,10174,12213,32162,34980,37614,39131,47496,53284,57216,98920,
#Partially deleted in new
chr18	55222334	55553421	chr18:55222334-55553421	0	-	55222334	55222334	8553170	18	5696,141,230,151,136,204,77,79,68,133,134,106,50,130,65,97,62,212,	0,5886,6512,10186,12213,32162,34980,37614,39131,47496,53284,57216,128024,128539,181119,238684,241741,330875,
#Partially deleted in new
chr18	55222334	55400917	chr18:55222334-55400917	0	-	55222334	55222334	8553170	15	5696,141,230,163,136,204,77,79,68,133,134,106,50,127,66,	0,5886,6512,10174,12213,32162,34980,37614,39131,47496,53284,57216,128024,128539,178517,
#Partially deleted in new
chr18	55222334	55587204	chr18:55222334-55587204	1	-	55228224	55587116	789624	19	5696,141,230,163,136,204,74,79,68,133,134,106,50,130,65,97,62,73,160,	0,5886,6512,10174,12213,32162,34980,37614,39131,47496,53284,57216,128024,128539,181119,238684,241741,362945,364710,
#Partially deleted in new
chr18	55226643	55321986	chr18:55226643-55321986	1	-	55228224	55321738	0	13	1387,141,230,151,136,204,77,79,68,133,134,106,317,	0,1577,2203,5877,7904,27853,30671,33305,34822,43187,48975,52907,95026,
#Partially deleted in new
chr18	55226645	55588625	chr18:55226645-55588625	1	-	55228224	55587116	0	20	1385,141,230,151,136,204,77,79,68,133,134,106,50,130,65,97,62,73,92,177,	0,1575,2201,5875,7902,27851,30669,33303,34820,43185,48973,52905,123713,124228,176808,234373,237430,358634,360399,361803,
#Partially deleted in new
chr18	55226783	55588232	chr18:55226783-55588232	1	-	55228224	55587116	0	20	1247,141,230,163,136,204,77,79,68,133,134,106,50,130,65,97,62,73,92,195,	0,1437,2063,5725,7764,27713,30531,33165,34682,43047,48835,52767,123575,124090,176670,234235,237292,358496,360261,361254,
#Partially deleted in new
chr18	55226792	55589807	chr18:55226792-55589807	1	-	55228224	55587116	0	20	1238,141,230,163,136,204,77,79,68,133,134,106,50,130,65,97,62,73,92,511,	0,1428,2054,5716,7755,27704,30522,33156,34673,43038,48826,52758,123566,124081,176661,234226,237283,358487,360252,362504,
#Partially deleted in new
chr18	55227678	55585908	chr18:55227678-55585908	1	-	55228224	55585352	0	19	352,141,230,163,136,204,77,79,68,133,134,106,50,130,65,97,62,73,98,	0,542,1168,4830,6869,26818,29636,32270,33787,42152,47940,51872,122680,123195,175775,233340,236397,357601,358132,
#Partially deleted in new
chr18	55227682	55322222	chr18:55227682-55322222	1	-	55228224	55321738	0	13	348,141,230,163,136,204,77,79,68,133,134,106,553,	0,538,1164,4826,6865,26814,29632,32266,33783,42148,47936,51868,93987,
#Partially deleted in new
chr18	55227688	55510772	chr18:55227688-55510772	1	-	55228224	55510597	0	18	342,141,230,151,136,204,77,79,68,133,134,106,50,130,65,97,62,194,	0,532,1158,4832,6859,26808,29626,32260,33777,42142,47930,51862,122670,123185,175765,233330,236387,282890,
#Partially deleted in new
chr18	55227689	55586105	chr18:55227689-55586105	1	-	55228224	55585352	0	19	341,141,230,151,136,204,77,79,68,133,134,106,50,130,65,97,62,73,295,	0,531,1157,4831,6858,26807,29625,32259,33776,42141,47929,51861,122669,123184,175764,233329,236386,357590,358121,
#Partially deleted in new
chr18	55227751	55589836	chr18:55227751-55589836	1	-	55228224	55585352	0	19	279,141,230,163,136,204,77,79,68,133,134,106,50,130,65,97,62,73,540,	0,469,1095,4757,6796,26745,29563,32197,33714,42079,47867,51799,122607,123122,175702,233267,236324,357528,361545,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr18	55227840	55402039	chr18:55227840-55402039	0	-	55227840	55227840	8553170	14	190,141,3825,136,204,77,79,68,133,134,106,50,130,460,	0,380,1006,6707,26656,29474,32108,33625,41990,47778,51710,122518,123033,173739,
#Partially deleted in new
chr18	55227845	55589806	chr18:55227845-55589806	1	-	55228224	55585352	789624	19	185,141,230,151,136,204,77,79,68,133,134,106,50,127,65,97,62,73,510,	0,375,1001,4675,6702,26651,29469,32103,33620,41985,47773,51705,122513,123028,175608,233173,236230,357434,361451,
#Partially deleted in new
chr18	55227848	55401757	chr18:55227848-55401757	1	-	55228224	55350982	0	15	182,141,230,151,136,204,77,79,68,133,134,106,50,127,178,	0,372,998,4672,6699,26648,29466,32100,33617,41982,47770,51702,122510,123025,173731,
#Deleted in new
chr18	55227848	55228955	chr18:55227848-55228955	0	-	55228224	55228955	789624	2	513,109,	0,998,
#Partially deleted in new
chr18	55227854	55403995	chr18:55227854-55403995	1	-	55228224	55403714	0	16	176,141,230,163,136,204,77,79,68,133,134,106,50,127,65,375,	0,366,992,4654,6693,26642,29460,32094,33611,41976,47764,51696,122504,123019,175599,175766,
#Partially deleted in new
chr18	55227863	55422492	chr18:55227863-55422492	1	-	55228224	55350982	0	16	167,141,230,151,136,204,77,79,68,133,134,106,50,130,65,313,	0,357,983,4657,6684,26633,29451,32085,33602,41967,47755,51687,122495,123010,175590,194316,
#Partially deleted in new
chr18	55227877	55302626	chr18:55227877-55302626	1	-	55228224	55302484	0	13	153,141,230,151,136,204,77,79,68,133,134,106,211,	0,343,969,4643,6670,26619,29437,32071,33588,41953,47741,51673,74538,
#Partially deleted in new
chr18	55227910	55403714	chr18:55227910-55403714	1	-	55228224	55403714	0	16	120,141,230,151,136,204,77,79,68,133,134,106,50,127,65,94,	0,310,936,4610,6637,26586,29404,32038,33555,41920,47708,51640,122448,122963,175543,175710,
#Partially deleted in new
chr18	55227910	55589777	chr18:55227910-55589777	1	-	55228224	55585352	0	17	120,141,230,151,136,204,77,79,68,133,134,106,65,97,62,73,481,	0,310,936,4610,6637,26586,29404,32038,33555,41920,47708,51640,175543,233108,236165,357369,361386,
#Partially deleted in new
chr18	55227910	55588617	chr18:55227910-55588617	1	-	55228224	55587116	0	18	120,141,230,163,136,204,77,79,68,133,134,106,65,97,62,73,92,148,	0,310,936,4598,6637,26586,29404,32038,33555,41920,47708,51640,175543,233108,236165,357369,359134,360559,
#Partially deleted in new
chr18	55227910	55588535	chr18:55227910-55588535	1	-	55228224	55588535	0	19	120,141,230,151,136,204,74,79,68,133,134,106,50,130,65,97,62,73,66,	0,310,936,4610,6637,26586,29404,32038,33555,41920,47708,51640,122448,122963,175543,233108,236165,357369,360559,
#Partially deleted in new
chr18	55227910	55587116	chr18:55227910-55587116	1	-	55228224	55587116	0	17	120,141,230,151,136,204,77,79,68,133,134,106,65,97,62,73,72,	0,310,936,4610,6637,26586,29404,32038,33555,41920,47708,51640,175543,233108,236165,357369,359134,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr18	55227935	55636027	chr18:55227935-55636027	1	-	55228224	55635897	789624	21	95,141,230,163,136,204,77,79,68,133,134,106,50,130,65,97,62,73,92,91,325,	0,285,911,4573,6612,26561,29379,32013,33530,41895,47683,51615,122423,122938,175518,233083,236140,357344,359109,403362,407767,
#Partially deleted in new
chr18	55227935	55589839	chr18:55227935-55589839	1	-	55228224	55587116	789624	20	95,141,230,163,136,204,77,79,68,133,134,124,50,130,65,97,62,73,92,543,	0,285,911,4573,6612,26561,29379,32013,33530,41895,47683,51615,122423,122938,175518,233083,236140,357344,359109,361361,
#Partially deleted in new
chr18	55227983	55402240	chr18:55227983-55402240	1	-	55228224	55350982	0	15	47,141,230,151,136,204,77,79,68,133,134,106,50,130,186,	0,237,863,4537,6564,26513,29331,31965,33482,41847,47635,51567,122375,122890,174071,
#Partially deleted in new
chr18	55228224	55422356	chr18:55228224-55422356	1	-	55228224	55279557	0	13	137,230,151,136,204,77,79,68,133,134,106,65,181,	0,622,4296,6323,26272,29090,31724,33241,41606,47394,51326,175229,193951,
#Partially deleted in new
chr18	55228259	55257495	chr18:55228259-55257495	0	-	55228259	55228259	8553170	6	102,230,151,136,204,181,	0,587,4261,6288,26237,29055,
#Partially deleted in new
chr18	55234605	55322345	chr18:55234605-55322345	0	-	55234605	55321738	789624	9	78,204,74,79,68,133,134,106,676,	0,19891,22709,25343,26860,35225,41013,44945,87064,
#Partially deleted in new
chr18	55254503	55321810	chr18:55254503-55321810	0	-	55254503	55254503	8553170	7	197,77,68,133,134,106,141,	0,2811,6962,15327,21115,25047,67166,
#Partially deleted in new
chr18	55254608	55321835	chr18:55254608-55321835	0	-	55269895	55321738	789624	7	92,77,79,68,133,106,166,	0,2706,5340,6857,15222,24942,67061,
#Partially deleted in new
chr18	55257361	55422268	chr18:55257361-55422268	0	-	55257361	55350982	789624	9	30,79,68,133,134,106,50,130,77,	0,2587,4104,12469,18257,22189,92997,93512,164830,
#Partially deleted in new
chr18	55259620	55275671	chr18:55259620-55275671	0	-	55259781	55275671	789624	4	407,68,133,53,	0,1845,10210,15998,
#Partially deleted in new
chr18	55259953	55422241	chr18:55259953-55422241	0	-	55259953	55350982	789624	9	74,68,133,134,106,50,130,65,66,	0,1512,9877,15665,19597,90405,90920,143500,162222,
#Partially deleted in new
chr18	55259994	55585856	chr18:55259994-55585856	0	-	55259994	55259994	8553170	9	33,68,50,130,65,97,62,73,46,	0,1471,90364,90879,143459,201024,204081,325285,325816,
#Partially deleted in new
chr18	55260005	55404087	chr18:55260005-55404087	0	-	55260005	55350982	789624	8	22,68,133,134,106,50,130,634,	0,1460,9825,15613,19545,90353,90868,143448,
#Partially deleted in new
chr18	55261089	55269849	chr18:55261089-55269849	0	-	55261089	55261089	8553170	2	444,19,	0,8741,
#Partially deleted in new
chr18	55261527	55401525	chr18:55261527-55401525	0	-	55261527	55350982	789624	7	6,133,134,106,50,130,525,	0,8303,14091,18023,88831,89346,139473,
#Partially deleted in new
chr18	55264595	55464137	chr18:55264595-55464137	0	-	55264595	55264595	8553170	8	5368,134,106,50,130,65,97,62,	0,11023,14955,85763,86278,138858,196423,199480,
#Partially deleted in new
chr18	55269850	55585862	chr18:55269850-55585862	0	-	55269850	55585756	789624	10	113,134,106,50,130,65,97,62,73,139,	0,5768,9700,80508,81023,133603,191168,194225,315429,315873,
#Partially deleted in new
chr18	55269857	55403764	chr18:55269857-55403764	0	-	55269857	55403714	789624	7	106,134,106,50,130,65,144,	0,5761,9693,80501,81016,133596,133763,
#Partially deleted in new
chr18	55269871	55401093	chr18:55269871-55401093	0	-	55269871	55350982	789624	6	92,134,106,50,127,93,	0,5747,9679,80487,81002,131129,
#Partially deleted in new
chr18	55269874	55401551	chr18:55269874-55401551	0	-	55269874	55350982	789624	6	89,134,106,50,130,52,	0,5744,9676,80484,80999,131625,
#Partially deleted in new
chr18	55269897	55402206	chr18:55269897-55402206	0	-	55269897	55350982	789624	6	66,134,106,50,127,152,	0,5721,9653,80461,80976,132157,
#Partially deleted in new
chr18	55269913	55585481	chr18:55269913-55585481	0	-	55269913	55585352	789624	7	50,134,106,50,130,65,202,	0,5705,9637,80445,80960,133540,315366,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	55269923	55664787	chr18:55269923-55664787	0	-	55269923	55664758	789624	10	40,134,106,50,130,65,97,62,73,113,	0,5695,9627,80435,80950,133530,191095,194152,315356,394751,
#Partially deleted in new
chr18	55269957	55422297	chr18:55269957-55422297	0	-	55269957	55350982	789624	7	6,134,106,50,127,65,118,	0,5661,9593,80401,80916,133496,152222,
#Partially deleted in new
chr18	55269959	55422355	chr18:55269959-55422355	0	-	55269959	55350982	789624	7	4,134,106,50,130,65,164,	0,5659,9591,80399,80914,133494,152232,
#Partially deleted in new
chr18	55275626	55546934	chr18:55275626-55546934	0	-	55275626	55275626	8553170	6	126,106,65,97,62,74,	0,3924,127827,185392,188449,271234,
#Partially deleted in new
chr18	55275631	55422512	chr18:55275631-55422512	0	-	55275631	55350982	789624	6	121,106,50,130,65,359,	0,3919,74727,75242,127822,146522,
#Partially deleted in new
chr18	55275659	55403660	chr18:55275659-55403660	0	-	55275659	55350982	789624	5	93,106,50,127,207,	0,3891,74699,75214,127794,
#Partially deleted in new
chr18	55275661	55401712	chr18:55275661-55401712	0	-	55275661	55350982	789624	5	91,106,50,130,24,	0,3889,74697,75212,126027,
#Partially deleted in new
chr18	55275696	55423621	chr18:55275696-55423621	0	-	55275696	55275696	8553170	6	56,106,50,130,65,103,	0,3854,74662,75177,127757,147822,
#Partially deleted in new
chr18	55275706	55588213	chr18:55275706-55588213	0	-	55275706	55585352	789624	9	46,106,50,130,65,97,62,73,176,	0,3844,74652,75167,127747,185312,188369,309573,312331,
#Partially deleted in new
chr18	55275723	55586242	chr18:55275723-55586242	0	-	55275723	55585352	789624	9	29,106,50,130,65,97,62,73,270,	0,3827,74635,75150,127730,185295,188352,309556,310249,
#Partially deleted in new
chr18	55275744	55588619	chr18:55275744-55588619	0	-	55275744	55587116	789624	10	8,106,50,130,65,97,62,73,92,150,	0,3806,74614,75129,127709,185274,188331,309535,311300,312725,
#Partially deleted in new
chr18	55279565	55320881	chr18:55279565-55320881	0	-	55279565	55279565	8553170	2	91,51,	0,41265,
#Partially deleted in new
chr18	55279593	55585852	chr18:55279593-55585852	0	-	55279593	55585352	789624	8	63,50,127,65,97,62,73,42,	0,70765,71280,123860,181425,184482,305686,306217,
#Partially deleted in new
chr18	55332066	55403505	chr18:55332066-55403505	0	-	55332066	55332066	8553170	4	233,50,127,52,	0,18292,18807,71387,
#Partially deleted in new
chr18	55350358	55402039	chr18:55350358-55402039	0	-	55350358	55401872	789624	3	50,130,182,	0,515,51499,
#Partially deleted in new
chr18	55350359	55585773	chr18:55350359-55585773	0	-	55350359	55585352	789624	6	49,130,65,97,62,494,	0,514,53094,110659,113716,234920,
#Partially deleted in new
chr18	55350375	55585968	chr18:55350375-55585968	0	-	55350375	55585914	789624	7	33,130,65,97,62,73,90,	0,498,53078,110643,113700,234904,235503,
#Partially deleted in new
chr18	55350394	55586104	chr18:55350394-55586104	0	-	55350394	55585352	789624	7	14,127,65,97,62,73,132,	0,479,53059,110624,113681,234885,235578,
#Partially deleted in new
chr18	55350895	55591279	chr18:55350895-55591279	0	-	55350895	55585352	789624	6	108,65,97,62,73,163,	0,52558,110123,113180,234384,240221,
#Partially deleted in new
chr18	55350901	55588150	chr18:55350901-55588150	0	-	55350901	55587116	789624	7	99,65,97,62,73,92,113,	0,52552,110117,113174,234378,236143,237136,
#Partially deleted in new
chr18	55350943	55546896	chr18:55350943-55546896	0	-	55350943	55350943	8553170	5	60,65,97,62,75,	0,52510,110075,113132,195878,
#Partially deleted in new
chr18	55350954	55591276	chr18:55350954-55591276	0	-	55350954	55587116	789624	7	49,65,97,62,73,92,160,	0,52499,110064,113121,234325,236090,240162,
#Partially deleted in new
chr18	55350966	55585966	chr18:55350966-55585966	0	-	55350966	55461085	789624	7	37,65,97,62,107,73,156,	0,52487,110052,113109,131183,234313,234844,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	55350993	55635892	chr18:55350993-55635892	0	-	55464118	55635892	789624	7	7,65,97,62,73,91,190,	0,52460,110025,113082,234286,280304,284709,
#Deleted in new
chr18	55403511	55404435	chr18:55403511-55404435	0	-	55403511	55403511	8553170	2	7,93,	0,831,
#Partially deleted in new
chr18	55452532	55482940	chr18:55452532-55482940	3	+	55452532	55452532	789624	2	178,218,	0,30190,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	55461033	55635972	chr18:55461033-55635972	0	-	55596107	55635897	789624	6	82,62,73,121,91,270,	0,3042,124246,135072,170264,174669,
#Partially deleted in new
chr18	55461096	55635957	chr18:55461096-55635957	0	-	55587085	55635897	789624	5	19,62,73,92,255,	0,2979,124183,125948,174606,
#Partially deleted in new
chr18	55461100	55469661	chr18:55461100-55469661	0	-	55461100	55461100	8553170	3	15,62,84,	0,2975,8477,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	55464114	55635948	chr18:55464114-55635948	0	-	55464114	55635897	789624	5	23,73,92,121,246,	0,121165,122930,131991,171588,
#Deleted in new
chr18	55479220	55479298	chr18:55479220-55479298	3	+	55479220	55479220	5263520	1	78,	0,
#Deleted in new
chr18	55492174	55496392	chr18:55492174-55496392	3	+	55492174	55492174	8553170	2	50,395,	0,3823,
#Partially deleted in new
chr18	55495627	55588243	chr18:55495627-55588243	0	-	55495627	55495627	8553170	4	435,73,92,206,	0,89652,91417,92410,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	55550260	55589746	chr18:55550260-55589746	0	-	55550260	55550260	8553170	4	1500,73,92,450,	0,35019,36784,39036,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	55585291	55635721	chr18:55585291-55635721	0	-	55585291	55585291	8553170	3	61,121,19,	0,10814,50411,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	55585316	55631362	chr18:55585316-55631362	0	-	55596107	55631362	789624	4	36,92,121,65,	0,1728,10789,45981,
#Deleted in new
chr18	55635832	55636310	chr18:55635832-55636310	7	+	55635832	55635832	16724991	1	478,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	55721062	55759122	chr18:55721062-55759122	1	+	55721062	55721062	8553170	2	472,83,	0,37977,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	55721317	55788761	chr18:55721317-55788761	3	+	55721317	55721317	8553170	4	217,76,71,149,	0,63581,65268,67295,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	55721395	55784944	chr18:55721395-55784944	1	+	55721395	55721395	8553170	5	139,261,54,65,46,	0,39907,41149,51311,63503,
#Deleted in new
chr18	55776726	55781721	chr18:55776726-55781721	3	-	55776726	55776726	8553170	2	3304,767,	0,4228,
#Deleted in new
chr18	55779110	55780750	chr18:55779110-55780750	0	-	55779110	55779110	8553170	2	920,63,	0,1577,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	55817166	55819759	chr18:55817166-55819759	3	+	55817166	55817166	8553170	1	2593,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	55881687	55920199	chr18:55881687-55920199	3	-	55881687	55881687	789624	4	1982,199,91,38,	0,16317,16649,38474,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	55893037	56023462	chr18:55893037-56023462	3	+	55893037	55893037	8553170	3	405,52,61,	0,124690,130364,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	56003612	56191262	chr18:56003612-56191262	3	-	56003612	56003612	789624	9	292,55,1144,150,118,101,126,73,499,	0,21728,24184,52292,52929,56491,177736,184665,187151,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	56003616	56056040	chr18:56003616-56056040	0	-	56003616	56003616	8553170	5	288,55,1144,182,136,	0,21724,24180,33424,52288,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	56040331	56068370	chr18:56040331-56068370	0	-	56040331	56040331	8553170	3	319,102,134,	0,15573,27905,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	56042134	56096314	chr18:56042134-56096314	0	+	56042134	56042134	8553170	2	210,240,	0,53940,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	56042252	56096314	chr18:56042252-56096314	0	+	56042252	56042252	789624	3	92,98,240,	0,7827,53822,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	56050128	56096314	chr18:56050128-56096314	1	+	56050128	56050128	8553170	4	49,207,124,240,	0,27393,27980,45946,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	56061108	56063078	chr18:56061108-56063078	3	-	56061108	56061108	8553170	2	170,382,	0,1588,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	56079393	56079594	chr18:56079393-56079594	3	-	56079393	56079393	8553170	1	201,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	56079580	56096319	chr18:56079580-56096319	3	+	56079580	56079580	8553170	3	41,173,245,	0,8830,16494,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	56083355	56137536	chr18:56083355-56137536	1	-	56083355	56083355	789624	9	595,185,122,119,139,87,169,237,231,	0,1849,4283,6829,19335,22171,37922,38937,53950,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	56083361	56137517	chr18:56083361-56137517	1	-	56083361	56083361	789624	9	589,185,122,87,169,335,196,173,212,	0,1843,4277,22165,37916,38261,38931,46439,53944,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	56087236	56109824	chr18:56087236-56109824	1	-	56087236	56087236	8553170	3	524,87,67,	0,18290,22521,
#Partially deleted in new
chr18	56088409	56096314	chr18:56088409-56096314	1	+	56088409	56088409	8553170	3	174,110,240,	0,3538,7665,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	56095920	56137483	chr18:56095920-56137483	0	-	56095920	56095920	8553170	4	176,139,87,178,	0,6770,9606,41385,
#Deleted in new
chr18	56095951	56096306	chr18:56095951-56096306	0	+	56095951	56095951	8553170	2	39,232,	0,123,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	56095989	56137349	chr18:56095989-56137349	0	-	56095989	56095989	8553170	5	107,139,87,169,44,	0,6701,9537,25288,41316,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	56105105	56109824	chr18:56105105-56109824	2	-	56105105	56105105	8553170	2	508,67,	0,4652,
#Partially deleted in new
chr18	56138611	56143221	chr18:56138611-56143221	3	+	56138611	56138611	8553170	2	104,350,	0,4260,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	56597207	56638645	chr18:56597207-56638645	1	-	56603026	56638440	0	8	5849,105,173,70,123,174,97,303,	0,13785,17216,19037,20796,27080,29153,41135,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	56599067	56600986	chr18:56599067-56600986	0	-	56599067	56599067	8553170	2	1298,349,	0,1570,
#Partially deleted in new
chr18	56600102	56600865	chr18:56600102-56600865	0	-	56600102	56600102	8553170	2	331,364,	0,399,
#Partially deleted in new
chr18	56602821	56651128	chr18:56602821-56651128	3	-	56603026	56638440	0	10	235,105,173,70,123,174,97,163,87,112,	0,8171,11602,13423,15182,21466,23539,35521,44627,48195,
#Partially deleted in new
chr18	56602823	56651274	chr18:56602823-56651274	0	-	56626251	56638440	789624	10	233,105,173,70,123,174,105,97,697,258,	0,8169,11600,13421,15180,21464,23338,23537,35519,48193,
#Partially deleted in new
chr18	56602897	56614491	chr18:56602897-56614491	0	-	56603052	56614491	789624	5	159,43,91,105,68,	0,1538,2284,8095,11526,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	56608278	56638427	chr18:56608278-56638427	0	-	56610974	56638427	789624	7	2819,173,70,123,174,97,85,	0,6145,7966,9725,16009,18082,30064,
#Partially deleted in new
chr18	56618040	56651593	chr18:56618040-56651593	0	-	56618040	56651075	789624	4	86,174,97,577,	0,6247,8320,32976,
#Partially deleted in new
chr18	56638358	56651600	chr18:56638358-56651600	0	-	56638358	56638440	789624	4	147,78,87,584,	0,603,9090,12658,
#Partially deleted in new
chr18	56638703	56651276	chr18:56638703-56651276	0	-	56638703	56638703	8553170	3	223,87,260,	0,8745,12313,
#Partially deleted in new
chr18	56647062	56651045	chr18:56647062-56651045	0	-	56647062	56647062	8553170	2	473,29,	0,3954,
#Partially deleted in new
chr18	56651342	57027313	chr18:56651342-57027313	1	+	57027003	57027207	789624	2	234,310,	0,375661,
#Partially deleted in new
chr18	56651360	57029811	chr18:56651360-57029811	1	+	56672515	57027207	789624	27	216,178,107,79,175,77,120,146,103,142,249,221,196,215,770,89,119,124,114,222,187,118,150,83,100,105,2808,	0,21136,27971,29952,31318,34595,35494,39855,40354,43258,43589,44881,66603,80022,105222,107504,128070,130172,164670,228583,272561,284427,287172,287950,311069,369384,375643,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr18	56651384	57036606	chr18:56651384-57036606	3	+	56672515	57027207	789624	28	192,178,107,79,175,77,120,146,103,142,249,221,196,215,770,89,99,119,124,114,222,187,118,150,83,100,105,9603,	0,21112,27947,29928,31294,34571,35470,39831,40330,43234,43565,44857,66579,79998,105198,107480,125397,128046,130148,164646,228559,272537,284403,287148,287926,311045,369360,375619,
#Partially deleted in new
chr18	56651384	57029805	chr18:56651384-57029805	1	+	56672515	57027207	789624	17	192,178,34,541,89,99,119,124,114,222,187,118,150,83,100,105,2802,	0,21112,27947,105427,107480,125397,128046,130148,164646,228559,272537,284403,287148,287926,311045,369360,375619,
#Partially deleted in new
chr18	56651674	56682840	chr18:56651674-56682840	0	+	56672515	56682840	789624	5	124,178,107,79,162,	0,20822,27657,29638,31004,
#Partially deleted in new
chr18	56694646	56696495	chr18:56694646-56696495	0	+	56694646	56694646	8553170	3	114,249,254,	0,303,1595,
#Partially deleted in new
chr18	56721449	56756698	chr18:56721449-56756698	0	+	56721449	56721449	8553170	3	220,215,116,	0,9933,35133,
#Partially deleted in new
chr18	56721484	56756858	chr18:56721484-56756858	0	+	56721484	56721484	8553170	3	99,215,276,	0,9898,35098,
#Partially deleted in new
chr18	56721535	56757346	chr18:56721535-56757346	0	+	56721535	56721535	8553170	3	172,215,764,	0,9847,35047,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	56753225	56753326	chr18:56753225-56753326	3	-	56753225	56753225	8553170	1	101,	0,
#Partially deleted in new
chr18	56757324	56782168	chr18:56757324-56782168	0	+	56757324	56757324	8553170	4	28,89,119,636,	0,1540,22106,24208,
#Partially deleted in new
chr18	56872667	56873970	chr18:56872667-56873970	3	-	56872667	56872667	8553170	2	132,449,	0,854,
#Partially deleted in new
chr18	56890832	56938680	chr18:56890832-56938680	0	+	56890832	56890832	8553170	4	116,187,118,148,	0,33089,44955,47700,
#Partially deleted in new
chr18	56935843	57020822	chr18:56935843-57020822	0	+	56935843	56938609	789624	6	62,49,150,83,100,78,	0,337,2689,3467,26586,84901,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	56957269	56957469	chr18:56957269-56957469	3	+	56957269	56957269	8553170	1	200,	0,
#Partially deleted in new
chr18	56962434	57010314	chr18:56962434-57010314	0	+	56962434	57009864	789624	2	95,477,	0,47403,
#Partially deleted in new
chr18	57027831	57038845	chr18:57027831-57038845	3	+	57027831	57027831	8553170	3	389,138,38,	0,1993,10976,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	57136321	57146998	chr18:57136321-57146998	3	-	57136321	57136321	8553170	3	289,110,123,	0,5287,10554,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	57147061	57150300	chr18:57147061-57150300	3	+	57147312	57147831	789624	1	3239,	0,
#Deleted in new
chr18	57169614	57171194	chr18:57169614-57171194	3	-	57169614	57169614	789624	2	416,62,	0,1518,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	57284601	57284708	chr18:57284601-57284708	3	-	57284601	57284601	8553170	1	107,	0,
#Partially deleted in new
chr18	57350812	57368933	chr18:57350812-57368933	3	+	57352846	57360277	0	4	2213,123,558,8939,	0,3589,6100,9182,
#Partially deleted in new
chr18	57357151	57371731	chr18:57357151-57371731	0	+	57357151	57371466	789624	3	319,107,128,	0,14257,14452,
#Deleted in new
chr18	57363512	57368933	chr18:57363512-57368933	0	+	57363512	57363512	8553170	2	99,368,	0,5053,
#Deleted in new
chr18	57427132	57432112	chr18:57427132-57432112	3	+	57427132	57427132	8553170	1	4980,	0,
#Partially deleted in new
chr18	57435684	57491297	chr18:57435684-57491297	3	+	57435716	57476723	789624	2	1260,14861,	0,40752,
#Partially deleted in new
chr18	57444375	57476760	chr18:57444375-57476760	0	+	57444375	57444375	8553170	3	52,61,324,	0,22784,32061,
#Partially deleted in new
chr18	57548282	57586772	chr18:57548282-57586772	3	-	57550711	57586620	0	11	2564,60,165,108,99,107,135,149,120,127,219,	0,3032,5977,6562,10862,14591,18164,23109,24963,31790,38271,
#Partially deleted in new
chr18	57549509	57586654	chr18:57549509-57586654	1	-	57550711	57586620	0	11	1337,60,165,108,99,107,135,149,120,145,101,	0,1805,4750,5335,9635,13364,16937,21882,23736,30545,37044,
#Partially deleted in new
chr18	57550253	57586701	chr18:57550253-57586701	0	-	57571581	57586620	789624	11	593,60,165,108,99,107,135,212,120,127,148,	0,1061,4006,4591,8891,12620,16193,21138,22992,29819,36300,
#Partially deleted in new
chr18	57551174	57559215	chr18:57551174-57559215	0	-	57551287	57559215	789624	4	200,165,108,71,	0,3085,3670,7970,
#Partially deleted in new
chr18	57554258	57586690	chr18:57554258-57586690	0	-	57554258	57586620	789624	8	166,108,107,135,149,120,127,137,	0,586,8615,12188,17133,18987,25814,32295,
#Partially deleted in new
chr18	57566547	57586699	chr18:57566547-57586699	0	-	57566547	57566547	8553170	4	34,212,120,146,	0,4844,6698,20006,
#Partially deleted in new
chr18	57566556	57586612	chr18:57566556-57586612	0	-	57566556	57573343	789624	6	25,149,120,127,110,59,	0,4835,6689,13516,19307,19997,
#Partially deleted in new
chr18	57567844	57586689	chr18:57567844-57586689	0	-	57567844	57586620	789624	5	32,149,120,127,136,	0,3547,5401,12228,18709,
#Partially deleted in new
chr18	57572989	57586654	chr18:57572989-57586654	0	-	57572989	57572989	8553170	3	376,145,101,	0,7065,13564,
#Partially deleted in new
chr18	57573004	57586621	chr18:57573004-57586621	0	-	57573004	57573004	8553170	3	361,127,68,	0,7068,13549,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	57588610	57589091	chr18:57588610-57589091	3	-	57588610	57588610	8553170	1	481,	0,
#Partially deleted in new
chr18	57600655	57622173	chr18:57600655-57622173	3	-	57601651	57621717	0	14	1128,132,132,114,136,200,222,87,71,79,90,159,83,466,	0,1699,2156,5201,5960,6478,6788,8701,10981,12946,14985,15161,19913,21052,
#Partially deleted in new
chr18	57601342	57605862	chr18:57601342-57605862	0	-	57601342	57601342	8553170	3	441,589,6,	0,1012,4514,
#Partially deleted in new
chr18	57601349	57621785	chr18:57601349-57621785	0	-	57607314	57621717	789624	12	434,132,132,114,136,200,40,10,90,159,83,78,	0,1005,1462,4507,5266,5784,6094,12321,14291,14467,19219,20358,
#Partially deleted in new
chr18	57605933	57607190	chr18:57605933-57607190	0	-	57605933	57605933	8553170	2	37,575,	0,682,
#Partially deleted in new
chr18	57607155	57621808	chr18:57607155-57621808	0	-	57607155	57607155	8553170	7	510,87,71,79,90,159,101,	0,2201,4481,6446,8485,8661,14552,
#Partially deleted in new
chr18	57607201	57621792	chr18:57607201-57621792	0	-	57607648	57621717	0	8	132,222,87,79,90,159,83,85,	0,242,2155,6400,8439,8615,13367,14506,
#Partially deleted in new
chr18	57607653	57621800	chr18:57607653-57621800	0	-	57607653	57621717	789624	7	12,87,71,79,159,83,93,	0,1703,3983,5948,8163,12915,14054,
#Partially deleted in new
chr18	57607655	57622213	chr18:57607655-57622213	0	-	57607655	57615864	789624	7	10,87,71,79,90,159,506,	0,1701,3981,5946,7985,8161,14052,
#Partially deleted in new
chr18	57607655	57621824	chr18:57607655-57621824	0	-	57607655	57615969	789624	7	10,87,71,79,90,159,86,	0,1701,3981,5946,7985,8161,14083,
#Partially deleted in new
chr18	57609377	57621792	chr18:57609377-57621792	0	-	57609377	57621717	789624	6	66,79,90,159,83,85,	0,4224,6263,6439,11191,12330,
#Partially deleted in new
chr18	57613623	57621737	chr18:57613623-57621737	0	-	57615968	57621717	789624	5	57,90,206,80,30,	0,2017,2193,6945,8084,
#Partially deleted in new
chr18	57613652	57621776	chr18:57613652-57621776	0	-	57613652	57613652	8553170	4	28,335,83,69,	0,1988,6916,8055,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	57630301	57667636	chr18:57630301-57667636	0	+	57630301	57630301	8553170	3	217,494,395,	0,11257,36940,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	57630349	57669296	chr18:57630349-57669296	3	+	57630349	57630349	8553170	3	169,494,1291,	0,11209,37656,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	57639454	57738044	chr18:57639454-57738044	3	+	57639454	57639454	8553170	6	76,494,610,71,442,283,	0,2104,91959,94571,95696,98307,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	57641913	57668175	chr18:57641913-57668175	0	+	57641913	57641913	8553170	2	139,170,	0,26092,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr18	57646425	57803301	chr18:57646425-57803301	1	-	57648487	57731807	789624	28	2287,131,139,246,84,224,289,133,76,112,165,113,189,157,44,209,191,89,159,83,71,73,62,99,114,98,203,304,	0,3941,5608,6058,7566,8768,14748,16057,20666,22003,22892,25042,28408,37610,38646,41873,45381,48156,48745,49024,51192,51369,54613,54789,58129,60064,85201,156572,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr18	57646425	57803315	chr18:57646425-57803315	3	-	57648487	57731807	8553170	28	2287,131,139,246,84,224,289,133,76,112,165,113,189,157,44,209,191,89,159,83,71,73,62,99,114,98,203,318,	0,3941,5608,6058,7566,8768,14748,16057,20666,22003,22892,25042,28408,37610,38646,41873,45381,48156,48745,49024,51192,51369,54613,54789,58129,60064,85201,156572,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr18	57646442	57801988	chr18:57646442-57801988	0	-	57655356	57731807	789624	29	2270,131,139,246,84,224,73,289,133,76,112,165,113,189,157,44,209,191,89,159,83,71,73,62,99,114,98,206,57,	0,3924,5591,6041,7549,8751,13300,14731,16040,20649,21986,22875,25025,28391,37593,38629,41856,45364,48139,48728,49007,51175,51352,54596,54772,58112,60047,85184,155489,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr18	57646492	57803067	chr18:57646492-57803067	0	-	57655356	57731807	8553170	29	2220,131,139,246,84,224,73,289,133,76,112,165,113,189,157,44,209,191,89,159,83,71,73,62,99,114,98,206,70,	0,3874,5541,5991,7499,8701,13250,14681,15990,20599,21936,22825,24975,28341,37543,38579,41806,45314,48089,48678,48957,51125,51302,54546,54722,58062,59997,85134,156505,
#Partially deleted in new
chr18	57669422	57731754	chr18:57669422-57731754	0	-	57675022	57731754	8553170	16	60,113,221,157,44,209,191,89,159,83,71,73,62,99,98,128,	0,2045,5411,14613,15649,18876,22384,25159,25748,26027,28195,28372,31616,31792,37067,62204,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	57684117	57688668	chr18:57684117-57688668	0	-	57684117	57684117	8553170	3	75,44,370,	0,954,4181,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	57695957	57738603	chr18:57695957-57738603	1	+	57695957	57695957	8553170	3	79,442,842,	0,39193,41804,
#Partially deleted in new
chr18	57697669	57708558	chr18:57697669-57708558	0	-	57697669	57697669	8553170	7	19,73,62,99,114,98,75,	0,125,3369,3545,6885,8820,10814,
#Partially deleted in new
chr18	57701088	57803101	chr18:57701088-57803101	0	-	57704663	57731807	789624	5	12,99,114,203,104,	0,126,3466,30538,101909,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	57731774	57740965	chr18:57731774-57740965	0	-	57731774	57731807	789624	2	58,469,	0,8722,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	57735399	57738044	chr18:57735399-57738044	0	+	57735399	57735399	8553170	3	193,56,283,	0,1636,2362,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	57755393	57755500	chr18:57755393-57755500	3	+	57755393	57755393	8553170	1	107,	0,
#Deleted in new
chr18	57838475	57838966	chr18:57838475-57838966	7	+	57838475	57838475	16724991	1	491,	0,
#Partially deleted in new
chr18	57961230	57963519	chr18:57961230-57963519	0	-	57961230	57961230	8553170	3	176,119,70,	0,275,2219,
#Partially deleted in new
chr18	57961230	57963519	chr18:57961230-57963519	3	-	57961230	57961230	8553170	3	176,123,70,	0,271,2219,
#Deleted in new
chr18	58018793	58019061	chr18:58018793-58019061	7	-	58018793	58018793	16724991	1	268,	0,
#Partially deleted in new
chr18	58044366	58396574	chr18:58044366-58396574	1	+	58044660	58396269	0	29	342,74,82,39,54,51,62,103,167,133,177,75,120,198,78,55,59,66,230,122,71,96,74,61,60,108,97,73,408,	0,121421,201060,204532,207634,271615,278058,278865,280629,284628,286371,289451,297311,298539,305170,306624,312827,319901,321632,323379,326030,328807,338879,341159,343072,344718,346279,347120,351800,
#Partially deleted in new
chr18	58044377	58396705	chr18:58044377-58396705	3	+	58044660	58396269	0	31	331,74,82,39,54,51,62,103,167,133,177,75,60,132,120,198,78,55,59,66,230,122,71,96,74,61,60,108,97,73,539,	0,121410,201049,204521,207623,271604,278047,278854,280618,284617,286360,289440,291100,296660,297300,298528,305159,306613,312816,319890,321621,323368,326019,328796,338868,341148,343061,344707,346268,347109,351789,
#Partially deleted in new
chr18	58044383	58396704	chr18:58044383-58396704	1	+	58044660	58396269	789624	4	325,97,73,538,	0,346262,347103,351783,
#Deleted in new
chr18	58044386	58045477	chr18:58044386-58045477	1	+	58044660	58045086	789624	2	322,406,	0,685,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr18	58044547	58401539	chr18:58044547-58401539	1	+	58044660	58396269	0	30	161,74,82,39,54,51,62,103,167,133,177,75,132,120,198,78,55,59,66,230,122,71,96,74,61,60,108,97,73,5373,	0,121240,200879,204351,207453,271434,277877,278684,280448,284447,286190,289270,296490,297130,298358,304989,306443,312646,319720,321451,323198,325849,328626,338698,340978,342891,344537,346098,346939,351619,
#Partially deleted in new
chr18	58044660	58396573	chr18:58044660-58396573	1	+	58044660	58396269	0	28	48,74,82,39,54,51,62,103,167,133,177,75,198,78,55,59,66,230,122,71,96,74,61,60,108,97,73,407,	0,121127,200766,204238,207340,271321,277764,278571,280335,284334,286077,289157,298245,304876,306330,312533,319607,321338,323085,325736,328513,338585,340865,342778,344424,345985,346826,351506,
#Partially deleted in new
chr18	58045524	58165861	chr18:58045524-58165861	0	+	58045524	58045524	8553170	2	91,74,	0,120263,
#Partially deleted in new
chr18	58045688	58245489	chr18:58045688-58245489	0	+	58045688	58045688	8553170	3	100,70,63,	0,120103,199738,
#Partially deleted in new
chr18	58045696	58165839	chr18:58045696-58165839	0	+	58045696	58045696	8553170	2	92,52,	0,120091,
#Partially deleted in new
chr18	58045706	58322471	chr18:58045706-58322471	0	+	58322439	58322471	789624	8	82,70,59,82,39,54,51,47,	0,120085,182123,199720,203192,206294,270275,276718,
#Partially deleted in new
chr18	58045933	58245508	chr18:58045933-58245508	0	+	58045933	58045933	8553170	3	85,74,82,	0,119854,199493,
#Partially deleted in new
chr18	58046362	58245508	chr18:58046362-58245508	0	+	58046362	58046362	8553170	3	1148,74,82,	0,119425,199064,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr18	58047225	58401540	chr18:58047225-58401540	1	+	58322439	58396269	0	31	285,74,82,39,54,51,62,103,167,133,177,75,60,132,120,198,78,55,59,66,230,122,71,96,74,61,60,108,97,73,5374,	0,118562,198201,201673,204775,268756,275199,276006,277770,281769,283512,286592,288252,293812,294452,295680,302311,303765,309968,317042,318773,320520,323171,325948,336020,338300,340213,341859,343420,344261,348941,
#Partially deleted in new
chr18	58054708	58165839	chr18:58054708-58165839	0	+	58054708	58054708	8553170	2	168,52,	0,111079,
#Partially deleted in new
chr18	58090790	58165839	chr18:58090790-58165839	0	+	58090790	58090790	8553170	2	837,52,	0,74997,
#Partially deleted in new
chr18	58149332	58396705	chr18:58149332-58396705	1	+	58149535	58396269	0	31	227,74,82,39,54,51,62,103,167,133,177,75,60,132,120,198,78,55,59,66,230,122,71,96,74,61,60,108,97,73,539,	0,16455,96094,99566,102668,166649,173092,173899,175663,179662,181405,184485,186145,191705,192345,193573,200204,201658,207861,214935,216666,218413,221064,223841,233913,236193,238106,239752,241313,242154,246834,
#Partially deleted in new
chr18	58149332	58396551	chr18:58149332-58396551	1	+	58322439	58396269	0	31	237,74,78,82,39,54,51,62,103,167,133,177,75,132,120,198,78,55,59,66,230,122,71,96,74,61,60,108,97,73,385,	0,16455,78497,96094,99566,102668,166649,173092,173899,175663,179662,181405,184485,191705,192345,193573,200204,201658,207861,214935,216666,218413,221064,223841,233913,236193,238106,239752,241313,242154,246834,
#Partially deleted in new
chr18	58149336	58396573	chr18:58149336-58396573	1	+	58149535	58396269	0	30	223,74,82,39,54,51,62,103,167,133,177,75,132,120,198,78,55,59,66,230,122,71,96,74,61,60,108,97,73,407,	0,16451,96090,99562,102664,166645,173088,173895,175659,179658,181401,184481,191701,192341,193569,200200,201654,207857,214931,216662,218409,221060,223837,233909,236189,238102,239748,241309,242150,246830,
#Partially deleted in new
chr18	58189833	58195676	chr18:58189833-58195676	3	-	58189833	58189833	8553170	3	126,265,157,	0,3985,5686,
#Partially deleted in new
chr18	58189896	58195696	chr18:58189896-58195696	0	-	58189896	58189896	8553170	3	63,265,98,	0,3922,5702,
#Partially deleted in new
chr18	58195389	58398157	chr18:58195389-58398157	1	+	58322439	58396269	0	29	344,82,39,54,51,62,103,167,133,177,75,132,120,198,78,55,59,66,230,122,71,96,74,61,60,108,97,73,1991,	0,50037,53509,56611,120592,127035,127842,129606,133605,135348,138428,145648,146288,147516,154147,155601,161804,168878,170609,172356,175007,177784,187856,190136,192049,193695,195256,196097,200777,
#Partially deleted in new
chr18	58195652	58323289	chr18:58195652-58323289	0	+	58322439	58323289	789624	8	81,78,82,39,54,51,62,58,	0,32177,49774,53246,56348,120329,126772,127579,
#Partially deleted in new
chr18	58197768	58325082	chr18:58197768-58325082	0	+	58197768	58197768	8553170	8	101,82,39,54,51,62,103,87,	0,47658,51130,54232,118213,124656,125463,127227,
#Partially deleted in new
chr18	58221534	58396578	chr18:58221534-58396578	1	+	58322439	58396269	0	30	223,82,39,54,51,62,103,167,133,177,75,60,132,120,198,78,55,59,66,230,122,71,96,74,61,60,108,97,73,412,	0,23892,27364,30466,94447,100890,101697,103461,107460,109203,112283,113943,119503,120143,121371,128002,129456,135659,142733,144464,146211,148862,151639,161711,163991,165904,167550,169111,169952,174632,
#Partially deleted in new
chr18	58221567	58329127	chr18:58221567-58329127	0	+	58322439	58329127	789624	8	190,82,39,54,62,103,167,133,	0,23859,27331,30433,100857,101664,103428,107427,
#Partially deleted in new
chr18	58221570	58322486	chr18:58221570-58322486	0	+	58322439	58322486	789624	7	187,78,82,39,54,51,62,	0,6259,23856,27328,30430,94411,100854,
#Partially deleted in new
chr18	58221630	58316001	chr18:58221630-58316001	0	+	58221630	58221630	8553170	6	127,59,82,39,54,20,	0,6199,23796,27268,30370,94351,
#Partially deleted in new
chr18	58247280	58323309	chr18:58247280-58323309	0	+	58247280	58247280	8553170	6	344,39,54,51,62,78,	0,1618,4720,68701,75144,75951,
#Partially deleted in new
chr18	58255439	58396705	chr18:58255439-58396705	1	+	58255640	58396269	789624	27	1335,51,62,103,167,133,177,75,60,132,120,198,78,55,59,66,230,122,71,96,74,61,60,108,97,73,539,	0,60542,66985,67792,69556,73555,75298,78378,80038,85598,86238,87466,94097,95551,101754,108828,110559,112306,114957,117734,127806,130086,131999,133645,135206,136047,140727,
#Partially deleted in new
chr18	58314554	58329127	chr18:58314554-58329127	0	+	58314554	58314554	8553170	6	35,51,62,103,167,133,	0,1427,7870,8677,10441,14440,
#Partially deleted in new
chr18	58323304	58334020	chr18:58323304-58334020	0	+	58323304	58323304	8553170	5	30,167,133,177,203,	0,1691,5690,7433,10513,
#Partially deleted in new
chr18	58323319	58396333	chr18:58323319-58396333	0	+	58323319	58396269	789624	20	15,167,133,177,75,78,55,59,66,230,122,71,96,74,61,60,108,97,73,167,	0,1676,5675,7418,10498,26217,27671,33874,40948,42679,44426,47077,49854,59926,62206,64119,65765,67326,68167,72847,
#Partially deleted in new
chr18	58330850	58336092	chr18:58330850-58336092	0	+	58330850	58330850	8553170	3	64,75,615,	0,2967,4627,
#Partially deleted in new
chr18	58340958	58366073	chr18:58340958-58366073	0	+	58340958	58340958	8553170	8	211,120,198,78,55,59,66,75,	0,719,1947,8578,10032,16235,23309,25040,
#Deleted in new
chr18	58359870	58366231	chr18:58359870-58366231	0	+	58359870	58359870	8553170	3	188,66,233,	0,4397,6128,
#Partially deleted in new
chr18	58366596	58373255	chr18:58366596-58373255	0	+	58366596	58366596	8553170	5	25,106,122,71,82,	0,524,1149,3800,6577,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	58371565	58372666	chr18:58371565-58372666	3	+	58371565	58371565	8553170	1	1101,	0,
#Partially deleted in new
chr18	58373110	58391509	chr18:58373110-58391509	0	+	58373110	58373110	8553170	7	159,74,61,60,108,97,23,	0,10135,12415,14328,15974,17535,18376,
#Partially deleted in new
chr18	58373169	58389519	chr18:58373169-58389519	0	+	58373169	58373169	8553170	5	100,74,61,60,435,	0,10076,12356,14269,15915,
#Partially deleted in new
chr18	58387710	58396580	chr18:58387710-58396580	0	+	58387710	58387710	8553170	4	1482,97,73,414,	0,2935,3776,8456,
#Partially deleted in new
chr18	58390063	58398157	chr18:58390063-58398157	0	+	58390063	58390063	8553170	3	679,73,1991,	0,1423,6103,
#Partially deleted in new
chr18	58398662	58400082	chr18:58398662-58400082	3	-	58398662	58398662	8553170	2	682,86,	0,1334,
#Deleted in new
chr18	58416764	58417628	chr18:58416764-58417628	3	+	58416764	58416764	8553170	2	157,489,	0,375,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	58446274	58453766	chr18:58446274-58453766	3	+	58446274	58446274	8553170	2	63,4458,	0,3034,
#Deleted in new
chr18	58451073	58451158	chr18:58451073-58451158	3	+	58451073	58451073	5263520	1	85,	0,
#Deleted in new
chr18	58451079	58451152	chr18:58451079-58451152	3	-	58451079	58451079	5263520	1	73,	0,
#Partially deleted in new
chr18	58476190	58477484	chr18:58476190-58477484	3	+	58476190	58476190	8553170	1	1294,	0,
#Partially deleted in new
chr18	58481246	58628957	chr18:58481246-58628957	3	-	58481822	58611797	789624	13	793,49,218,89,275,36,128,148,3391,1735,118,129,194,	0,16802,22684,33746,35661,42559,42688,47844,53587,97567,126075,130442,147517,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	58511597	58512310	chr18:58511597-58512310	3	-	58511597	58511597	8553170	1	713,	0,
#Partially deleted in new
chr18	58528751	58537119	chr18:58528751-58537119	0	-	58528751	58528751	8553170	2	487,2286,	0,6082,
#Deleted in new
chr18	58535414	58538552	chr18:58535414-58538552	3	+	58535414	58535414	8553170	2	154,2399,	0,739,
#Partially deleted in new
chr18	58538139	58579024	chr18:58538139-58579024	0	-	58538139	58538139	8553170	4	85,70,205,211,	0,6466,6874,40674,
#Partially deleted in new
chr18	58544227	58579212	chr18:58544227-58579212	0	-	58544227	58544227	8553170	2	448,399,	0,34586,
#Partially deleted in new
chr18	58557069	58566677	chr18:58557069-58566677	3	+	58557069	58557069	8553170	2	119,216,	0,9392,
#Deleted in new
chr18	58577943	58580169	chr18:58577943-58580169	0	-	58577943	58577943	8553170	1	2226,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	58580259	58580973	chr18:58580259-58580973	0	-	58580259	58580259	8553170	2	289,266,	0,448,
#Deleted in new
chr18	58600630	58600698	chr18:58600630-58600698	3	+	58600630	58600630	789624	1	68,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	58631258	58632120	chr18:58631258-58632120	7	+	58631258	58631258	16724991	2	511,67,	0,795,
#Deleted in new
chr18	58659857	58660524	chr18:58659857-58660524	3	+	58659857	58659857	8553170	2	156,93,	0,574,
#Deleted in new
chr18	58670008	58671877	chr18:58670008-58671877	3	-	58670008	58670008	8553170	2	800,409,	0,1460,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr18	58671385	58754477	chr18:58671385-58754477	3	+	58671643	58747842	0	17	467,167,122,151,179,97,33,27,33,204,178,75,128,150,158,126,7073,	0,9784,24980,29055,37992,38590,39535,42697,44549,51662,62011,62921,63816,70479,72952,74280,76019,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr18	58671464	58750138	chr18:58671464-58750138	1	+	58671643	58747842	789624	17	388,167,122,151,179,97,33,27,33,204,178,75,128,150,158,126,2734,	0,9705,24901,28976,37913,38511,39456,42618,44470,51583,61932,62842,63737,70400,72873,74201,75940,
#Partially deleted in new
chr18	58671531	58748154	chr18:58671531-58748154	1	+	58671643	58747842	0	16	321,167,122,151,179,97,27,33,204,178,75,128,150,158,126,750,	0,9638,24834,28909,37846,38444,42551,44403,51516,61865,62775,63670,70333,72806,74134,75873,
#Partially deleted in new
chr18	58671565	58748502	chr18:58671565-58748502	0	+	58671643	58733888	8553170	18	287,167,122,151,179,97,33,27,33,204,178,99,75,128,150,158,126,1098,	0,9604,24800,28875,37812,38410,39355,42517,44369,51482,61831,62316,62741,63636,70299,72772,74100,75839,
#Partially deleted in new
chr18	58672206	58700586	chr18:58672206-58700586	0	+	58681245	58700586	789624	4	130,167,122,146,	0,8963,24159,28234,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	58672612	58752730	chr18:58672612-58752730	3	-	58672612	58672612	8553170	3	247,91,56,	0,24564,80062,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	58672737	58677614	chr18:58672737-58677614	1	-	58672737	58672737	8553170	4	122,114,132,30,	0,1268,2578,4847,
#Partially deleted in new
chr18	58681170	58747898	chr18:58681170-58747898	0	+	58681170	58710028	8553170	16	166,122,151,97,33,27,33,43,204,178,75,128,150,158,126,494,	0,15195,19270,28805,29750,32912,34764,39209,41877,52226,53136,54031,60694,63167,64495,66234,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr18	58681323	58747952	chr18:58681323-58747952	0	+	58681323	58681323	8553170	15	13,122,151,179,97,27,33,204,178,260,128,150,158,126,548,	0,15042,19117,28054,28652,32759,34611,41724,52073,52983,53878,60541,63014,64342,66081,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	58690355	58692153	chr18:58690355-58692153	7	+	58690355	58690355	16724991	2	1249,88,	0,1710,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr18	58709321	58747734	chr18:58709321-58747734	0	+	58709321	58709321	8553170	13	751,33,27,33,43,204,178,116,128,150,158,126,330,	0,1599,4761,6613,11058,13726,24075,25129,25880,32543,35016,36344,38083,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	58733451	58741879	chr18:58733451-58741879	0	+	58733451	58733451	8553170	5	123,75,128,159,15,	0,855,1750,4316,8413,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	58733509	58748031	chr18:58733509-58748031	0	+	58733509	58733509	8553170	6	1057,128,150,158,126,627,	0,1692,8355,10828,12156,13895,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	58733641	58747906	chr18:58733641-58747906	0	+	58733641	58733641	8553170	7	339,116,128,150,158,126,502,	0,809,1560,8223,10696,12024,13763,
#Partially deleted in new
chr18	58741430	58745792	chr18:58741430-58745792	0	+	58741430	58741430	8553170	3	584,158,127,	0,2907,4235,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	58752178	58753898	chr18:58752178-58753898	3	-	58752178	58752178	8553170	2	222,403,	0,1317,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	58754858	58757842	chr18:58754858-58757842	3	-	58754858	58754858	8553170	2	370,370,	0,2614,
#Deleted in new
chr18	58805267	58805374	chr18:58805267-58805374	3	+	58805267	58805267	8553170	1	107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	58813879	58834364	chr18:58813879-58834364	3	+	58813879	58813879	789624	3	195,103,180,	0,17806,20305,
#Partially deleted in new
chr18	58862599	58986480	chr18:58862599-58986480	3	+	58918287	58984466	789624	11	567,82,110,2363,182,177,163,282,113,148,2509,	0,2704,2870,55671,71833,76845,85467,90918,116455,118870,121372,
#Partially deleted in new
chr18	58862947	58985538	chr18:58862947-58985538	1	+	58918287	58984466	789624	10	219,110,2363,182,177,163,282,113,148,1567,	0,2522,55323,71485,76497,85119,90570,116107,118522,121024,
#Partially deleted in new
chr18	58863482	58918568	chr18:58863482-58918568	0	+	58918287	58918568	789624	3	268,110,298,	0,1987,54788,
#Partially deleted in new
chr18	58863561	58918531	chr18:58863561-58918531	0	+	58918287	58918531	789624	4	125,82,110,261,	0,1742,1908,54709,
#Partially deleted in new
chr18	58863603	58918492	chr18:58863603-58918492	0	+	58918287	58918492	789624	4	147,82,110,222,	0,1700,1866,54667,
#Partially deleted in new
chr18	58863612	58985944	chr18:58863612-58985944	1	+	58918287	58984466	789624	10	74,110,2363,182,177,163,282,113,148,1973,	0,1857,54658,70820,75832,84454,89905,115442,117857,120359,
#Partially deleted in new
chr18	58864090	58984656	chr18:58864090-58984656	1	+	58918287	58984466	789624	11	145,82,110,2363,182,177,163,282,113,148,685,	0,1213,1379,54180,70342,75354,83976,89427,114964,117379,119881,
#Partially deleted in new
chr18	58864092	58918507	chr18:58864092-58918507	0	+	58918287	58918507	789624	3	143,110,237,	0,1377,54178,
#Partially deleted in new
chr18	58864408	58918608	chr18:58864408-58918608	0	+	58918287	58918608	789624	3	121,110,338,	0,1061,53862,
#Partially deleted in new
chr18	58864623	58984842	chr18:58864623-58984842	1	+	58918287	58984466	789624	10	762,110,2363,182,177,163,282,113,148,871,	0,846,53647,69809,74821,83443,88894,114431,116846,119348,
#Partially deleted in new
chr18	58864820	58918643	chr18:58864820-58918643	0	+	58918287	58918643	789624	3	166,110,373,	0,649,53450,
#Partially deleted in new
chr18	58864876	58918661	chr18:58864876-58918661	0	+	58918287	58918661	789624	3	110,82,391,	0,427,53394,
#Partially deleted in new
chr18	58864887	58918651	chr18:58864887-58918651	0	+	58918287	58918651	789624	4	99,82,110,381,	0,416,582,53383,
#Partially deleted in new
chr18	58864893	58918768	chr18:58864893-58918768	0	+	58918287	58918768	789624	2	93,498,	0,53377,
#Partially deleted in new
chr18	58865553	58918608	chr18:58865553-58918608	0	+	58896552	58918608	789624	3	26,198,338,	0,30871,52717,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	58920329	58934578	chr18:58920329-58934578	0	+	58920329	58931696	789624	3	304,110,146,	0,11316,14103,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	58920333	58932515	chr18:58920333-58932515	0	+	58920333	58931696	789624	3	300,110,129,	0,11312,12053,
#Partially deleted in new
chr18	58920522	58981617	chr18:58920522-58981617	0	+	58920522	58981617	789624	3	111,113,148,	0,58532,60947,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	58926196	58926296	chr18:58926196-58926296	3	-	58926196	58926196	8553170	1	100,	0,
#Partially deleted in new
chr18	58934231	58948081	chr18:58934231-58948081	0	+	58934231	58934231	8553170	3	383,177,15,	0,5213,13835,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	58939512	58940430	chr18:58939512-58940430	0	+	58939512	58939512	8553170	2	109,631,	0,287,
#Partially deleted in new
chr18	58948183	58981525	chr18:58948183-58981525	0	+	58948183	58954293	789624	5	46,282,101,113,56,	0,5334,6050,30871,33286,
#Partially deleted in new
chr18	58953183	58984799	chr18:58953183-58984799	0	+	58953183	58953183	8553170	5	99,282,113,148,828,	0,334,25871,28286,30788,
#Partially deleted in new
chr18	58964085	58984094	chr18:58964085-58984094	0	+	58964085	58964085	8553170	4	166,113,148,123,	0,14969,17384,19886,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	58964116	58979491	chr18:58964116-58979491	0	+	58964116	58964116	8553170	2	135,437,	0,14938,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	58977489	58985066	chr18:58977489-58985066	0	+	58977489	58977489	8553170	4	179,113,148,1095,	0,1565,3980,6482,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	58979566	58985944	chr18:58979566-58985944	0	+	58979566	58979566	8553170	2	2051,1973,	0,4405,
#Partially deleted in new
chr18	58996733	59069338	chr18:58996733-59069338	7	+	58996733	58996733	16724991	18	150,33,258,99,141,54,177,102,114,183,51,93,108,138,204,147,108,48,	0,1614,22729,24474,30675,33402,38936,40205,47331,54754,55935,56418,60304,62749,65984,71637,72110,72557,
#Partially deleted in new
chr18	59021231	59059617	chr18:59021231-59059617	4	+	59021231	59021231	16724991	10	64,142,227,180,103,102,166,80,114,133,	0,6175,8556,14436,15708,22844,30273,31932,35808,38253,
#Partially deleted in new
chr18	59053131	59057942	chr18:59053131-59057942	4	+	59053131	59053131	16724991	3	112,114,317,	0,3908,4494,
#Partially deleted in new
chr18	59067208	59069307	chr18:59067208-59069307	4	+	59067208	59067208	16724991	3	37,143,467,	0,1163,1632,
#Partially deleted in new
chr18	59081923	59084497	chr18:59081923-59084497	3	+	59081923	59081923	8553170	3	193,74,297,	0,1521,2277,
#Deleted in new
chr18	59083754	59084981	chr18:59083754-59084981	1	+	59083754	59083754	8553170	3	25,333,286,	0,446,941,
#Partially deleted in new
chr18	59139476	59158836	chr18:59139476-59158836	3	+	59139948	59158685	789624	6	559,110,150,120,58,205,	0,10036,13059,16211,18131,19155,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	59139865	59157311	chr18:59139865-59157311	1	+	59139948	59155811	789624	4	170,110,150,1624,	0,9647,12670,15822,
#Partially deleted in new
chr18	59139874	59158832	chr18:59139874-59158832	0	+	59139948	59155713	789624	6	161,110,77,120,58,201,	0,9638,12661,15813,17733,18757,
#Partially deleted in new
chr18	59139883	59153361	chr18:59139883-59153361	0	+	59139883	59139883	8553170	3	152,110,826,	0,9629,12652,
#Partially deleted in new
chr18	59139887	59147732	chr18:59139887-59147732	0	+	59139887	59139887	8553170	2	148,438,	0,7407,
#Partially deleted in new
chr18	59139892	59148012	chr18:59139892-59148012	0	+	59139892	59139892	8553170	2	159,1030,	0,7090,
#Partially deleted in new
chr18	59139898	59158832	chr18:59139898-59158832	1	+	59139948	59158650	789624	5	137,110,150,120,201,	0,9614,12637,15789,18733,
#Partially deleted in new
chr18	59155604	59158832	chr18:59155604-59158832	0	+	59155604	59155604	8553170	3	203,58,201,	0,2003,3027,
#Partially deleted in new
chr18	59220167	59230771	chr18:59220167-59230771	3	+	59220265	59230468	0	3	237,243,368,	0,5324,10236,
#Partially deleted in new
chr18	59220171	59230770	chr18:59220171-59230770	1	+	59220265	59230457	0	3	233,224,367,	0,5320,10232,
#Partially deleted in new
chr18	59220265	59230621	chr18:59220265-59230621	1	+	59220265	59230468	0	3	139,243,197,	0,5226,10159,
#Partially deleted in new
chr18	59225491	59230774	chr18:59225491-59230774	0	+	59225491	59230457	789624	2	243,364,	0,4919,
#Partially deleted in new
chr18	59225666	59230766	chr18:59225666-59230766	0	+	59225666	59230468	789624	2	49,356,	0,4744,
#Deleted in new
chr18	59267034	59273385	chr18:59267034-59273385	1	-	59269475	59273206	789624	2	2467,468,	0,5883,
#Deleted in new
chr18	59267034	59273393	chr18:59267034-59273393	3	-	59269003	59273206	789624	3	2467,254,476,	0,5326,5883,
#Deleted in new
chr18	59272417	59272920	chr18:59272417-59272920	0	-	59272417	59272417	8553170	1	503,	0,
#Deleted in new
chr18	59272984	59274086	chr18:59272984-59274086	0	-	59272984	59273206	789624	2	248,225,	0,877,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	59275155	59318544	chr18:59275155-59318544	1	-	59276695	59318462	789624	3	1579,88,249,	0,37529,43140,
#Partially deleted in new
chr18	59295401	59318649	chr18:59295401-59318649	3	-	59296697	59318462	789624	3	1524,88,354,	0,17283,22894,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr18	59327822	59359962	chr18:59327822-59359962	3	-	59331092	59359244	0	13	3307,122,154,71,194,133,59,124,100,62,108,155,932,	0,3595,5268,10734,10937,18096,19690,21290,25379,26696,27490,27681,31208,
#Deleted in new
chr18	59330775	59331639	chr18:59330775-59331639	0	-	59330775	59330775	8553170	2	354,222,	0,642,
#Partially deleted in new
chr18	59331462	59333691	chr18:59331462-59333691	0	-	59331462	59331462	8553170	2	77,601,	0,1628,
#Partially deleted in new
chr18	59345970	59351589	chr18:59345970-59351589	0	-	59345970	59345970	8553170	4	81,59,124,178,	0,1542,3142,5441,
#Partially deleted in new
chr18	59352680	59359265	chr18:59352680-59359265	0	-	59352680	59352680	8553170	5	621,62,108,155,235,	0,1838,2632,2823,6350,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	59360699	59386749	chr18:59360699-59386749	3	+	59360699	59360699	8553170	2	129,288,	0,25762,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr18	59430938	59697423	chr18:59430938-59697423	1	-	59435907	59697342	789624	11	5203,36,36,140,121,101,153,135,53,81,212,	0,7172,8604,8738,17044,23912,35800,38534,49247,265690,266273,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr18	59430938	59697662	chr18:59430938-59697662	3	-	59435907	59697342	8553170	12	5203,36,36,140,121,101,153,135,53,81,258,86,	0,7172,8604,8738,17044,23912,35800,38534,49247,265690,266273,266638,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	59430939	59480240	chr18:59430939-59480240	1	-	59435907	59480240	789624	9	5202,36,36,140,121,101,153,135,55,	0,7171,8603,8737,17043,23911,35799,38533,49246,
#Partially deleted in new
chr18	59435144	59455212	chr18:59435144-59455212	0	-	59435144	59435144	8553170	6	997,36,36,140,121,362,	0,2966,4398,4532,12838,19706,
#Partially deleted in new
chr18	59435923	59697220	chr18:59435923-59697220	0	-	59435923	59697220	8553170	9	218,36,36,140,153,135,53,81,9,	0,2187,3619,3753,30815,33549,44262,260705,261288,
#Partially deleted in new
chr18	59563708	59568615	chr18:59563708-59568615	3	+	59563708	59563708	8553170	3	355,149,42,	0,4481,4865,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	59685819	59688400	chr18:59685819-59688400	3	+	59685819	59685819	8553170	2	337,205,	0,2376,
#Deleted in new
chr18	59696458	59698111	chr18:59696458-59698111	3	+	59696458	59696458	8553170	2	211,870,	0,783,
#Deleted in new
chr18	59700522	59700946	chr18:59700522-59700946	3	+	59700522	59700522	8553170	1	424,	0,
#Deleted in new
chr18	59761557	59761905	chr18:59761557-59761905	7	+	59761557	59761557	16724991	1	348,	0,
#Deleted in new
chr18	59778571	59778989	chr18:59778571-59778989	7	+	59778571	59778571	16724991	1	418,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	59821039	59824461	chr18:59821039-59824461	7	+	59821039	59821039	16724991	2	28,500,	0,2922,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	59824024	59825261	chr18:59824024-59825261	5	+	59824024	59824024	16724991	2	373,586,	0,651,
#Deleted in new
chr18	59899947	59904306	chr18:59899947-59904306	3	+	59900177	59902753	0	2	288,1660,	0,2699,
#Deleted in new
chr18	59900015	59903537	chr18:59900015-59903537	1	+	59900177	59902848	0	3	220,151,891,	0,412,2631,
#Deleted in new
chr18	59900035	59902963	chr18:59900035-59902963	0	+	59900035	59900035	8553170	3	200,287,317,	0,392,2611,
#Partially deleted in new
chr18	59929225	59930330	chr18:59929225-59930330	7	+	59929225	59929225	16724991	3	217,63,209,	0,684,896,
#Deleted in new
chr18	59969437	59971396	chr18:59969437-59971396	7	+	59969437	59969437	16724991	1	1959,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	59972913	59973207	chr18:59972913-59973207	3	+	59972913	59972913	8553170	1	294,	0,
#Deleted in new
chr18	60009993	60011143	chr18:60009993-60011143	7	-	60009993	60009993	16724991	1	1150,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	60010280	60014258	chr18:60010280-60014258	3	+	60010280	60010280	8553170	3	380,359,1023,	0,650,2955,
#Deleted in new
chr18	60016777	60017441	chr18:60016777-60017441	7	-	60016777	60016777	16724991	1	664,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	60018624	60018731	chr18:60018624-60018731	3	+	60018624	60018624	8553170	1	107,	0,
#Partially deleted in new
chr18	60125032	60161195	chr18:60125032-60161195	3	+	60125032	60125032	8553170	3	190,156,225,	0,4467,35938,
#Deleted in new
chr18	60149575	60150365	chr18:60149575-60150365	7	+	60149575	60149575	16724991	1	790,	0,
#Deleted in new
chr18	60196554	60198172	chr18:60196554-60198172	7	+	60196554	60196554	16724991	1	1618,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	60329232	60538595	chr18:60329232-60538595	3	+	60329232	60329232	8553170	4	113,102,123,296,	0,150338,206400,209067,
#Deleted in new
chr18	60371061	60372775	chr18:60371061-60372775	3	-	60371350	60372349	0	1	1714,	0,
#Deleted in new
chr18	60495867	60496336	chr18:60495867-60496336	7	-	60495867	60495867	16724991	2	211,76,	0,393,
#Partially deleted in new
chr18	60519840	60520165	chr18:60519840-60520165	7	+	60519840	60519840	16724991	1	325,	0,
#Partially deleted in new
chr18	60525615	60526156	chr18:60525615-60526156	7	-	60525615	60525615	16724991	1	541,	0,
#Partially deleted in new
chr18	60611772	60646089	chr18:60611772-60646089	7	+	60611772	60611772	16724991	12	255,91,111,121,100,118,61,79,148,106,88,169,	0,4187,5715,6129,8259,11162,12416,12578,18881,30188,31718,34148,
#Partially deleted in new
chr18	60640418	60654623	chr18:60640418-60654623	5	+	60640418	60640418	16724991	5	47,108,49,75,194,	0,1542,3113,5502,14011,
#Deleted in new
chr18	60663114	60664369	chr18:60663114-60664369	7	+	60663114	60663114	16724991	1	1255,	0,
#Deleted in new
chr18	60794612	60794916	chr18:60794612-60794916	7	-	60794612	60794612	16724991	1	304,	0,
#Partially deleted in new
chr18	61333581	61555773	chr18:61333581-61555773	3	+	61490553	61554695	789624	12	246,398,295,120,168,188,254,137,122,118,252,1584,	0,156820,165604,166801,169371,173791,194385,202911,205442,211445,216396,220608,
#Partially deleted in new
chr18	61334272	61554695	chr18:61334272-61554695	1	+	61490553	61554695	789624	12	125,398,295,120,168,188,254,137,122,118,252,506,	0,156129,164913,166110,168680,173100,193694,202220,204751,210754,215705,219917,
#Deleted in new
chr18	61404857	61405205	chr18:61404857-61405205	7	-	61404857	61404857	16724991	1	348,	0,
#Partially deleted in new
chr18	61490541	61555132	chr18:61490541-61555132	1	+	61490553	61554695	789624	11	258,295,120,168,188,254,137,122,118,252,943,	0,8644,9841,12411,16831,37425,45951,48482,54485,59436,63648,
#Partially deleted in new
chr18	61549865	61554358	chr18:61549865-61554358	0	+	61549865	61549865	8553170	2	364,169,	0,4324,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	61571341	61577151	chr18:61571341-61577151	0	-	61571341	61571341	8553170	3	203,57,124,	0,2552,5686,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	61571347	61579456	chr18:61571347-61579456	3	-	61571347	61571347	8553170	5	197,116,57,184,50,	0,1874,2546,5680,8059,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	61585745	61606657	chr18:61585745-61606657	3	-	61585745	61585745	8553170	5	105,130,132,176,192,	0,6748,13401,19190,20720,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	61592374	61748754	chr18:61592374-61748754	2	-	61592374	61592374	8553170	4	249,84,141,49,	0,100815,155665,156331,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	61592374	61748832	chr18:61592374-61748832	1	-	61592374	61592374	8553170	4	249,84,106,127,	0,100815,155700,156331,
#Deleted in new
chr18	61606067	61606916	chr18:61606067-61606916	1	-	61606067	61606067	8553170	2	587,66,	0,783,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	61611636	61628072	chr18:61611636-61628072	1	-	61611636	61611636	8553170	2	518,37,	0,16399,
#Partially deleted in new
chr18	61681652	61682695	chr18:61681652-61682695	3	+	61681652	61681652	8553170	2	149,167,	0,876,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	61748175	61756646	chr18:61748175-61756646	3	+	61748175	61748175	789624	4	125,100,82,4861,	0,545,2891,3610,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	61808062	61893759	chr18:61808062-61893759	3	-	61815851	61816463	789624	2	8536,965,	0,84732,
#Partially deleted in new
chr18	61816121	61894231	chr18:61816121-61894231	0	-	61816121	61816463	789624	3	477,123,82,	0,76673,78028,
#Partially deleted in new
chr18	61875004	61893734	chr18:61875004-61893734	0	-	61875004	61875004	8553170	3	89,123,337,	0,17790,18393,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	61888062	61888854	chr18:61888062-61888854	0	-	61888062	61888062	8553170	1	792,	0,
#Partially deleted in new
chr18	61888124	61894247	chr18:61888124-61894247	0	-	61888124	61888124	8553170	4	84,152,123,98,	0,2240,4670,6025,
#Partially deleted in new
chr18	61905254	62154623	chr18:61905254-62154623	2	-	62017629	62154623	789624	25	238,113,53,43,74,76,56,87,103,103,109,109,92,93,100,140,183,79,56,93,41,117,131,125,79,	0,112374,167418,169524,177418,179276,179954,183501,185221,190593,195820,197539,200288,201534,201731,204579,207879,209306,232988,233728,238051,240654,241716,242959,249290,
#Deleted in new
chr18	61957272	61958014	chr18:61957272-61958014	7	-	61957272	61957272	16724991	1	742,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	62041163	62102821	chr18:62041163-62102821	0	-	62045855	62102821	789624	9	4816,53,76,56,87,103,103,109,28,	0,31509,43367,44045,47592,49312,54684,59911,61630,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr18	62041163	62187044	chr18:62041163-62187044	1	-	62045855	62161353	789624	31	4816,53,43,74,76,56,87,103,103,109,109,92,93,100,140,183,79,56,93,60,41,117,131,125,107,99,122,253,77,126,201,	0,31509,33615,41509,43367,44045,47592,49312,54684,59911,61630,64379,65625,65822,68670,71970,73397,97079,97819,99256,102142,104745,105807,107050,113381,115965,116523,119969,121089,122367,145680,
#Partially deleted in new
chr18	62042470	62187017	chr18:62042470-62187017	1	-	62045855	62161353	789624	30	3509,53,43,74,76,56,87,103,103,109,109,92,93,100,140,183,79,56,93,41,117,131,125,107,99,122,253,77,126,174,	0,30202,32308,40202,42060,42738,46285,48005,53377,58604,60323,63072,64318,64515,67363,70663,72090,95772,96512,100835,103438,104500,105743,112074,114658,115216,118662,119782,121060,144373,
#Partially deleted in new
chr18	62042851	62187056	chr18:62042851-62187056	1	-	62045855	62161353	789624	29	3128,53,43,74,76,56,87,103,103,109,109,92,93,100,140,183,79,56,93,60,41,117,131,125,107,99,122,253,213,	0,29821,31927,39821,41679,42357,45904,47624,52996,58223,59942,62691,63937,64134,66982,70282,71709,95391,96131,97568,100454,103057,104119,105362,111693,114277,114835,118281,143992,
#Partially deleted in new
chr18	62044232	62187038	chr18:62044232-62187038	1	-	62045855	62161353	789624	30	1747,53,43,74,76,56,87,103,103,109,109,92,93,100,140,183,79,56,93,60,41,117,131,125,107,99,122,253,77,195,	0,28440,30546,38440,40298,40976,44523,46243,51615,56842,58561,61310,62556,62753,65601,68901,70328,94010,94750,96187,99073,101676,102738,103981,110312,112896,113454,116900,118020,142611,
#Partially deleted in new
chr18	62044233	62187077	chr18:62044233-62187077	1	-	62045855	62161353	789624	29	1746,53,43,74,76,56,87,103,103,109,109,92,93,100,140,183,79,56,93,60,41,117,131,125,107,99,122,253,55,	0,28439,30545,38439,40297,40975,44522,46242,51614,56841,58560,61309,62555,62752,65600,68900,70327,94009,94749,96186,99072,101675,102737,103980,110311,112895,113453,116899,142789,
#Partially deleted in new
chr18	62044235	62187056	chr18:62044235-62187056	1	-	62045855	62161353	789624	28	1744,53,43,74,76,56,87,103,103,109,109,92,93,100,140,183,79,56,93,41,117,131,125,107,99,122,253,213,	0,28437,30543,38437,40295,40973,44520,46240,51612,56839,58558,61307,62553,62750,65598,68898,70325,94007,94747,99070,101673,102735,103978,110309,112893,113451,116897,142608,
#Partially deleted in new
chr18	62044239	62186989	chr18:62044239-62186989	0	-	62148247	62161353	789624	29	1740,53,43,74,76,56,87,103,103,109,109,92,93,100,140,183,79,56,93,60,41,117,131,40,107,99,122,253,146,	0,28433,30539,38433,40291,40969,44516,46236,51608,56835,58554,61303,62549,62746,65594,68894,70321,94003,94743,96180,99066,101669,102731,103974,110305,112889,113447,116893,142604,
#Partially deleted in new
chr18	62044241	62186998	chr18:62044241-62186998	1	-	62045855	62161353	789624	26	1738,53,43,74,76,56,87,103,103,109,109,92,93,100,56,93,60,41,117,131,125,107,99,122,253,155,	0,28431,30537,38431,40289,40967,44514,46234,51606,56833,58552,61301,62547,62744,94001,94741,96178,99064,101667,102729,103972,110303,112887,113445,116891,142602,
#Partially deleted in new
chr18	62044256	62187019	chr18:62044256-62187019	1	-	62045855	62161353	789624	30	1723,117,53,43,74,76,56,87,103,103,109,109,92,93,100,140,183,79,56,93,60,41,117,131,125,107,99,122,253,176,	0,26133,28416,30522,38416,40274,40952,44499,46219,51591,56818,58537,61286,62532,62729,65577,68877,70304,93986,94726,96163,99049,101652,102714,103957,110288,112872,113430,116876,142587,
#Partially deleted in new
chr18	62044300	62187017	chr18:62044300-62187017	1	-	62045855	62161353	789624	27	1679,53,43,74,76,56,87,103,103,109,109,92,93,100,140,183,79,56,93,41,117,131,40,99,122,253,174,	0,28372,30478,38372,40230,40908,44455,46175,51547,56774,58493,61242,62488,62685,65533,68833,70260,93942,94682,99005,101608,102670,103913,112828,113386,116832,142543,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	62044310	62076027	chr18:62044310-62076027	0	-	62044310	62044310	8553170	3	1669,53,1249,	0,28362,30468,
#Partially deleted in new
chr18	62044323	62187024	chr18:62044323-62187024	1	-	62045855	62157798	789624	29	1656,53,43,74,76,56,87,103,103,109,109,92,93,100,140,183,79,56,93,60,41,117,131,125,107,99,122,94,181,	0,28349,30455,38349,40207,40885,44432,46152,51524,56751,58470,61219,62465,62662,65510,68810,70237,93919,94659,96096,98982,101585,102647,103890,110221,112805,113363,116809,142520,
#Partially deleted in new
chr18	62044349	62187046	chr18:62044349-62187046	0	-	62148247	62161353	789624	28	1630,53,43,74,76,56,87,103,109,109,92,93,100,140,183,79,56,93,60,41,117,131,40,107,99,122,253,203,	0,28323,30429,38323,40181,40859,44406,51498,56725,58444,61193,62439,62636,65484,68784,70211,93893,94633,96070,98956,101559,102621,103864,110195,112779,113337,116783,142494,
#Partially deleted in new
chr18	62044548	62187038	chr18:62044548-62187038	1	-	62045855	62161353	789624	30	1431,53,43,74,76,56,87,103,103,109,109,92,93,100,140,183,79,56,93,60,41,117,131,125,107,99,122,253,126,195,	0,28124,30230,38124,39982,40660,44207,45927,51299,56526,58245,60994,62240,62437,65285,68585,70012,93694,94434,95871,98757,101360,102422,103665,109996,112580,113138,116584,118982,142295,
#Partially deleted in new
chr18	62044633	62187079	chr18:62044633-62187079	1	-	62045855	62161353	789624	30	1346,53,43,74,76,56,87,103,103,109,109,92,93,100,140,183,79,56,93,60,41,117,131,125,107,99,122,253,126,57,	0,28039,30145,38039,39897,40575,44122,45842,51214,56441,58160,60909,62155,62352,65200,68500,69927,93609,94349,95786,98672,101275,102337,103580,109911,112495,113053,116499,118897,142389,
#Partially deleted in new
chr18	62044633	62187015	chr18:62044633-62187015	1	-	62045855	62161353	789624	29	1346,53,43,74,76,56,87,103,103,109,109,92,93,100,140,183,79,56,93,41,117,131,125,107,99,122,253,77,172,	0,28039,30145,38039,39897,40575,44122,45842,51214,56441,58160,60909,62155,62352,65200,68500,69927,93609,94349,98672,101275,102337,103580,109911,112495,113053,116499,117619,142210,
#Partially deleted in new
chr18	62044633	62186989	chr18:62044633-62186989	1	-	62045855	62161353	789624	31	1346,117,53,43,74,76,56,87,103,103,109,109,92,93,100,140,183,79,56,93,60,41,117,131,125,107,99,122,253,126,146,	0,25756,28039,30145,38039,39897,40575,44122,45842,51214,56441,58160,60909,62155,62352,65200,68500,69927,93609,94349,95786,98672,101275,102337,103580,109911,112495,113053,116499,118897,142210,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr18	62044635	62158008	chr18:62044635-62158008	0	-	62044635	62044635	8553170	28	1344,117,53,43,74,76,56,87,103,103,109,109,92,93,100,140,183,79,56,93,60,41,117,131,125,107,99,322,	0,25754,28037,30143,38037,39895,40573,44120,45840,51212,56439,58158,60907,62153,62350,65198,68498,69925,93607,94347,95784,98670,101273,102335,103578,109909,112493,113051,
#Partially deleted in new
chr18	62044722	62187067	chr18:62044722-62187067	1	-	62045855	62161353	789624	30	1257,53,43,74,76,56,87,103,103,109,109,92,93,100,140,79,56,93,60,41,117,131,125,107,99,122,253,77,126,224,	0,27950,30056,37950,39808,40486,44033,45753,51125,56352,58071,60820,62066,62263,65111,69838,93520,94260,95697,98583,101186,102248,103491,109822,112406,112964,116410,117530,118808,142121,
#Partially deleted in new
chr18	62045186	62187017	chr18:62045186-62187017	0	-	62148247	62161353	789624	26	793,53,43,74,76,56,87,103,103,109,109,92,93,100,56,93,60,41,117,131,40,107,99,122,253,174,	0,27486,29592,37486,39344,40022,43569,45289,50661,55888,57607,60356,61602,61799,93056,93796,95233,98119,100722,101784,103027,109358,111942,112500,115946,141657,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr18	62045368	62187077	chr18:62045368-62187077	0	-	62103592	62161353	789624	32	611,123,121,53,43,74,76,56,87,103,103,109,109,11,92,93,100,140,183,79,56,93,60,41,117,131,125,107,99,122,253,234,	0,11353,13679,27304,29410,37304,39162,39840,43387,45107,50479,55706,57425,58220,60174,61420,61617,64465,67765,69192,92874,93614,95051,97937,100540,101602,102845,109176,111760,112318,115764,141475,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr18	62045382	62114626	chr18:62045382-62114626	0	-	62058929	62114626	789624	19	597,123,205,53,43,74,76,56,87,103,103,109,109,92,93,100,140,183,66,	0,11339,13433,27290,29396,37290,39148,39826,43373,45093,50465,55692,57411,60160,61406,61603,64451,67751,69178,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr18	62045434	62187015	chr18:62045434-62187015	0	-	62088805	62161353	789624	30	545,123,205,53,43,74,76,56,87,103,109,109,92,93,100,140,183,79,56,93,60,41,117,131,125,107,99,122,253,172,	0,11287,13381,27238,29344,37238,39096,39774,43321,50413,55640,57359,60108,61354,61551,64399,67699,69126,92808,93548,94985,97871,100474,101536,102779,109110,111694,112252,115698,141409,
#Partially deleted in new
chr18	62045512	62187015	chr18:62045512-62187015	0	-	62088728	62161353	789624	29	467,53,43,74,76,56,452,103,103,109,109,92,93,100,140,183,79,56,93,60,41,117,131,125,107,99,122,253,172,	0,27160,29266,37160,39018,39696,42878,44963,50335,55562,57281,60030,61276,61473,64321,67621,69048,92730,93470,94907,97793,100396,101458,102701,109032,111616,112174,115620,141331,
#Partially deleted in new
chr18	62045680	62184671	chr18:62045680-62184671	1	-	62045855	62161353	789624	29	299,53,43,74,76,56,87,103,103,109,109,92,93,100,140,183,79,56,93,60,41,117,131,125,107,99,122,253,151,	0,26992,29098,36992,38850,39528,43075,44795,50167,55394,57113,59862,61108,61305,64153,67453,68880,92562,93302,94739,97625,100228,101290,102533,108864,111448,112006,115452,138840,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr18	62051787	62187015	chr18:62051787-62187015	1	-	62052935	62161353	789624	29	1170,53,43,74,76,56,87,103,103,109,109,92,93,100,140,183,79,56,93,60,41,117,131,125,107,99,122,253,172,	0,20885,22991,30885,32743,33421,36968,38688,44060,49287,51006,53755,55001,55198,58046,61346,62773,86455,87195,88632,91518,94121,95183,96426,102757,105341,105899,109345,135056,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	62052548	62075900	chr18:62052548-62075900	0	-	62052548	62052548	8553170	3	409,53,1122,	0,20124,22230,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr18	62069391	62186993	chr18:62069391-62186993	1	-	62070367	62161353	789624	30	1115,53,43,74,76,56,87,103,103,109,109,92,93,100,140,183,79,56,93,60,41,117,131,125,107,99,122,253,126,150,	0,3281,5387,13281,15139,15817,19364,21084,26456,31683,33402,36151,37397,37594,40442,43742,45169,68851,69591,71028,73914,76517,77579,78822,85153,87737,88295,91741,94139,117452,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	62072369	62075181	chr18:62072369-62075181	0	-	62072369	62072369	8553170	2	356,403,	0,2409,
#Partially deleted in new
chr18	62102810	62109957	chr18:62102810-62109957	0	-	62103777	62109957	789624	6	92,81,92,93,100,124,	0,908,2732,3978,4175,7023,
#Partially deleted in new
chr18	62105039	62186975	chr18:62105039-62186975	0	-	62105039	62105039	8553170	19	595,93,100,140,183,79,56,93,60,41,117,131,125,107,99,122,253,77,132,	0,1749,1946,4794,8094,9521,33203,33943,35380,38266,40869,41931,43174,49505,52089,52647,56093,57213,81804,
#Partially deleted in new
chr18	62112564	62187049	chr18:62112564-62187049	1	-	62113094	62161353	789624	15	752,79,56,93,60,41,117,131,125,107,99,122,253,126,206,	0,1996,25678,26418,27855,30741,33344,34406,35649,41980,44564,45122,48568,50966,74279,
#Partially deleted in new
chr18	62112810	62187028	chr18:62112810-62187028	1	-	62113094	62161353	789624	16	506,79,56,93,60,41,117,131,125,107,99,122,253,77,126,185,	0,1750,25432,26172,27609,30495,33098,34160,35403,41734,44318,44876,48322,49442,50720,74033,
#Partially deleted in new
chr18	62112812	62187069	chr18:62112812-62187069	1	-	62113094	62161353	789624	15	504,79,56,93,60,41,117,131,125,107,99,122,253,126,47,	0,1748,25430,26170,27607,30493,33096,34158,35401,41732,44316,44874,48320,50718,74210,
#Partially deleted in new
chr18	62118546	62154556	chr18:62118546-62154556	0	-	62118546	62118546	8553170	10	111,38,56,93,60,41,117,131,125,12,	0,4960,19696,20436,21873,24759,27362,28424,29667,35998,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr18	62135652	62187015	chr18:62135652-62187015	1	-	62137096	62161353	789624	12	1460,56,93,41,117,131,125,107,99,122,253,172,	0,2590,3330,7653,10256,11318,12561,18892,21476,22034,25480,51191,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr18	62135740	62187028	chr18:62135740-62187028	1	-	62138238	62161353	789624	12	2558,93,60,41,117,131,125,107,99,122,253,185,	0,3242,4679,7565,10168,11230,12473,18804,21388,21946,25392,51103,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr18	62136732	62162290	chr18:62136732-62162290	1	-	62137096	62161353	789624	13	380,56,93,60,41,117,131,125,107,99,122,253,38,	0,1510,2250,3687,6573,9176,10238,11481,17812,20396,20954,24400,25520,
#Partially deleted in new
chr18	62145980	62187118	chr18:62145980-62187118	0	-	62145980	62161353	789624	10	45,131,125,107,99,122,253,77,126,96,	0,990,2233,8564,11148,11706,15152,16272,17550,41042,
#Partially deleted in new
chr18	62145992	62161337	chr18:62145992-62161337	0	-	62154644	62161337	789624	5	33,131,125,107,205,	0,978,2221,8552,15140,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	62146995	62158005	chr18:62146995-62158005	0	-	62146995	62146995	8553170	6	106,125,107,99,122,25,	0,1218,7549,10133,10691,10985,
#Partially deleted in new
chr18	62153444	62187015	chr18:62153444-62187015	1	-	62154496	62161353	789624	5	1207,99,122,253,172,	0,3684,4242,7688,33399,
#Partially deleted in new
chr18	62153568	62187028	chr18:62153568-62187028	1	-	62154496	62161353	789624	6	1083,99,122,253,77,185,	0,3560,4118,7564,8684,33275,
#Partially deleted in new
chr18	62154565	62187053	chr18:62154565-62187053	0	-	62154565	62163549	789624	6	86,99,122,94,126,31,	0,2563,3121,6567,8965,32457,
#Partially deleted in new
chr18	62157155	62187049	chr18:62157155-62187049	0	-	62157155	62161353	789624	5	72,122,253,77,27,	0,531,3977,5097,29867,
#Partially deleted in new
chr18	62161351	62187020	chr18:62161351-62187020	0	-	62161351	62161351	8553170	5	34,77,126,104,177,	0,901,2179,12975,25492,
#Partially deleted in new
chr18	62162262	62187038	chr18:62162262-62187038	0	-	62162262	62162262	8553170	3	250,126,195,	0,1268,24581,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr18	62187254	62310217	chr18:62187254-62310217	1	+	62187505	62305534	789624	29	777,90,72,56,114,204,92,294,76,96,113,91,72,141,165,148,157,124,49,80,107,100,83,64,139,117,89,71,4804,	0,23898,33782,33964,34129,40034,40343,41050,43939,45077,57509,65409,68152,70693,71257,74256,76734,77474,79446,81614,86725,88119,92519,93391,95051,100096,104288,111535,118159,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr18	62187257	62307112	chr18:62187257-62307112	1	+	62187505	62305534	789624	30	774,90,72,56,114,204,92,294,76,96,113,91,72,141,165,148,157,124,49,80,102,107,100,83,64,139,117,89,71,1699,	0,23895,33779,33961,34126,40031,40340,41047,43936,45074,57506,65406,68149,70690,71254,74253,76731,77471,79443,81611,82153,86722,88116,92516,93388,95048,100093,104285,111532,118156,
#Partially deleted in new
chr18	62187273	62307829	chr18:62187273-62307829	3	+	62187505	62305534	789624	29	758,90,72,56,114,204,92,294,76,96,113,91,72,141,165,148,157,124,49,80,107,100,83,64,139,117,89,71,2416,	0,23879,33763,33945,34110,40015,40324,41031,43920,45058,57490,65390,68133,70674,71238,74237,76715,77455,79427,81595,86706,88100,93086,93372,95032,100077,104269,111516,118140,
#Partially deleted in new
chr18	62187290	62275571	chr18:62187290-62275571	0	+	62187505	62275571	789624	22	741,90,72,56,114,204,92,294,76,96,113,91,72,141,165,148,157,124,49,68,107,198,	0,23862,33746,33928,34093,39998,40307,41014,43903,45041,57473,65373,68116,70657,71221,74220,76698,77438,79410,81590,86689,88083,
#Partially deleted in new
chr18	62220859	62227450	chr18:62220859-62227450	0	+	62220859	62220859	8553170	4	249,56,114,162,	0,359,524,6429,
#Partially deleted in new
chr18	62228384	62235407	chr18:62228384-62235407	0	+	62228384	62228384	8553170	4	214,76,96,528,	0,2809,3947,6495,
#Partially deleted in new
chr18	62228439	62254711	chr18:62228439-62254711	0	+	62228439	62228439	8553170	6	159,76,96,113,91,20,	0,2754,3892,16324,24224,26252,
#Partially deleted in new
chr18	62245809	62247412	chr18:62245809-62247412	3	+	62245809	62245809	8553170	1	1603,	0,
#Partially deleted in new
chr18	62261610	62275572	chr18:62261610-62275572	0	+	62261610	62275572	789624	7	48,157,124,49,80,107,199,	0,2378,3118,5090,7258,12369,13763,
#Partially deleted in new
chr18	62268514	62274042	chr18:62268514-62274042	0	+	62268514	62268514	8553170	2	434,63,	0,5465,
#Partially deleted in new
chr18	62277595	62291616	chr18:62277595-62291616	0	+	62277595	62277595	8553170	7	60,83,83,64,139,117,74,	0,2178,2764,3050,4710,9755,13947,
#Partially deleted in new
chr18	62280325	62298848	chr18:62280325-62298848	0	+	62280325	62280325	8553170	6	117,64,137,117,89,59,	0,320,1980,7025,11217,18464,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	62282315	62285548	chr18:62282315-62285548	0	+	62282315	62282315	8553170	3	129,123,100,	0,1923,3133,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	62282319	62285973	chr18:62282319-62285973	0	+	62282319	62282319	8553170	2	125,525,	0,3129,
#Deleted in new
chr18	62300035	62300998	chr18:62300035-62300998	3	-	62300035	62300035	8553170	2	572,65,	0,898,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	62325286	62387659	chr18:62325286-62387659	1	+	62325352	62385034	0	7	141,82,126,144,94,95,2909,	0,22881,24525,29104,32961,34668,59464,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	62325286	62387710	chr18:62325286-62387710	1	+	62325352	62384759	0	9	141,82,126,144,94,95,114,53,2960,	0,22881,24525,29104,32961,34668,36393,41421,59464,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	62325286	62387710	chr18:62325286-62387710	1	+	62325352	62385034	0	8	141,82,126,144,94,95,114,2960,	0,22881,24525,29104,32961,34668,36393,59464,
#Partially deleted in new
chr18	62325286	62367435	chr18:62325286-62367435	1	+	62325352	62367435	789624	9	141,82,126,144,94,95,114,53,6,	0,22881,24525,29104,32961,34668,36393,41421,42143,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	62325314	62391292	chr18:62325314-62391292	3	+	62325352	62385034	0	10	113,82,126,144,94,95,114,53,784,6542,	0,22853,24497,29076,32933,34640,36365,41393,43386,59436,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	62325325	62336786	chr18:62325325-62336786	0	+	62325325	62325325	8553170	2	102,473,	0,10988,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	62330811	62330913	chr18:62330811-62330913	3	+	62330811	62330811	8553170	1	102,	0,
#Partially deleted in new
chr18	62357902	62360043	chr18:62357902-62360043	0	+	62357902	62357902	8553170	2	439,89,	0,2052,
#Partially deleted in new
chr18	62372893	62378130	chr18:62372893-62378130	3	-	62372893	62372893	8553170	3	70,202,52,	0,1052,5185,
#Deleted in new
chr18	62415677	62416227	chr18:62415677-62416227	7	+	62415677	62415677	16724991	1	550,	0,
#Deleted in new
chr18	62418317	62418576	chr18:62418317-62418576	7	+	62418317	62418317	16724991	1	259,	0,
#Deleted in new
chr18	62442027	62443126	chr18:62442027-62443126	7	+	62442027	62442027	16724991	1	1099,	0,
#Partially deleted in new
chr18	62523006	62578583	chr18:62523006-62578583	3	+	62523424	62576579	789624	14	1357,112,77,72,113,95,84,58,136,65,95,129,1494,2072,	0,16674,19491,21795,27341,33196,35680,37580,40002,41564,41995,47096,51050,53505,
#Deleted in new
chr18	62523618	62525495	chr18:62523618-62525495	0	+	62523618	62524753	789624	1	1877,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr18	62523666	62586729	chr18:62523666-62586729	0	+	62523666	62576579	789624	15	697,112,77,72,113,95,84,58,136,65,95,129,1494,141,2284,	0,16014,18831,21135,26681,32536,35020,36920,39342,40904,41335,46436,50390,52845,60779,
#Partially deleted in new
chr18	62524172	62563065	chr18:62524172-62563065	0	+	62524172	62524172	8553170	6	191,112,77,113,58,57,	0,15508,18325,26175,36414,38836,
#Deleted in new
chr18	62525918	62526325	chr18:62525918-62526325	3	-	62525918	62525918	8553170	1	407,	0,
#Partially deleted in new
chr18	62526888	62560644	chr18:62526888-62560644	0	+	62539704	62560644	789624	8	93,112,77,72,113,95,84,58,	0,12792,15609,17913,23459,29314,31798,33698,
#Partially deleted in new
chr18	62539513	62578579	chr18:62539513-62578579	1	+	62539704	62576579	789624	13	279,77,72,113,95,84,58,136,65,95,129,1494,2068,	0,2984,5288,10834,16689,19173,21073,23495,25057,25488,30589,34543,36998,
#Deleted in new
chr18	62551202	62552505	chr18:62551202-62552505	3	+	62551202	62551202	8553170	1	1303,	0,
#Partially deleted in new
chr18	62558541	62564602	chr18:62558541-62564602	0	+	62558541	62558541	8553170	4	229,58,136,32,	0,2045,4467,6029,
#Partially deleted in new
chr18	62560352	62576729	chr18:62560352-62576729	0	+	62560352	62560352	8553170	7	292,136,65,95,129,1494,218,	0,2656,4218,4649,9750,13704,16159,
#Deleted in new
chr18	62574478	62575499	chr18:62574478-62575499	0	+	62574478	62574478	8553170	2	166,187,	0,834,
#Partially deleted in new
chr18	62575297	62587709	chr18:62575297-62587709	0	+	62575297	62576579	789624	4	253,141,150,129,	0,1214,9148,12283,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	62581804	62586729	chr18:62581804-62586729	0	+	62581804	62581804	8553170	2	92,2284,	0,2641,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	62650307	62650601	chr18:62650307-62650601	3	-	62650307	62650307	8553170	1	294,	0,
#Partially deleted in new
chr18	62715449	62980433	chr18:62715449-62980433	3	+	62715683	62979431	789624	17	1810,197,126,167,147,231,203,61,96,156,201,163,131,105,195,229,2172,	0,114585,123334,144985,179561,180331,187514,189774,199463,204509,226268,229659,243179,247918,257064,259947,262812,
#Partially deleted in new
chr18	62731225	62731332	chr18:62731225-62731332	3	-	62731225	62731225	8553170	1	107,	0,
#Partially deleted in new
chr18	62779398	62860513	chr18:62779398-62860513	0	+	62779398	62779398	8553170	4	170,197,126,79,	0,50636,59385,81036,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	62832159	62889665	chr18:62832159-62889665	0	+	62832159	62832159	8553170	4	168,126,167,98,	0,6624,28275,57408,
#Partially deleted in new
chr18	62832173	62895088	chr18:62832173-62895088	0	+	62832173	62832173	8553170	5	154,126,140,167,78,	0,6610,10761,28261,62837,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	62837677	62839875	chr18:62837677-62839875	0	+	62837677	62837677	8553170	1	2198,	0,
#Partially deleted in new
chr18	62903149	62958726	chr18:62903149-62958726	0	+	62903149	62958726	789624	6	17,61,96,156,163,98,	0,2074,11763,16809,41959,55479,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	62906286	62941910	chr18:62906286-62941910	0	+	62906286	62906286	8553170	4	104,96,156,193,	0,8626,13672,35431,
#Partially deleted in new
chr18	63123345	63320128	chr18:63123345-63320128	3	-	63128624	63318666	0	2	5414,2047,	0,194736,
#Partially deleted in new
chr18	63127034	63319786	chr18:63127034-63319786	1	-	63128624	63318666	0	3	1725,871,613,	0,191047,192139,
#Partially deleted in new
chr18	63128211	63161869	chr18:63128211-63161869	0	-	63128211	63128211	8553170	2	548,24,	0,33634,
#Deleted in new
chr18	63151113	63151320	chr18:63151113-63151320	3	-	63151113	63151113	8553170	1	207,	0,
#Deleted in new
chr18	63207621	63208168	chr18:63207621-63208168	3	+	63207621	63207621	8553170	1	547,	0,
#Deleted in new
chr18	63313801	63318812	chr18:63313801-63318812	1	-	63318048	63318666	0	1	5011,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	63327725	63367510	chr18:63327725-63367510	3	-	63331781	63367118	789624	10	4176,102,84,84,192,96,66,57,90,500,	0,7531,11074,16684,23162,27478,27772,32010,35053,39285,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	63327725	63367206	chr18:63327725-63367206	1	-	63331781	63367118	789624	10	4176,102,84,84,192,96,66,57,90,196,	0,7531,11074,16684,23162,27478,27772,32010,35053,39285,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	63330824	63346530	chr18:63330824-63346530	0	-	63330824	63330824	8553170	4	1077,102,84,2121,	0,4432,7975,13585,
#Partially deleted in new
chr18	63330841	63367228	chr18:63330841-63367228	0	-	63366662	63367118	789624	11	1060,102,84,84,192,96,66,57,90,270,218,	0,4415,7958,13568,20046,24362,24656,28894,31937,35563,36169,
#Partially deleted in new
chr18	63330843	63367174	chr18:63330843-63367174	0	-	63366296	63367118	789624	11	1058,102,84,84,192,96,66,57,90,59,164,	0,4413,7956,13566,20044,24360,24654,28892,31935,35406,36167,
#Partially deleted in new
chr18	63331382	63367200	chr18:63331382-63367200	1	-	63331781	63367118	789624	9	519,84,84,192,96,66,57,90,190,	0,7417,13027,19505,23821,24115,28353,31396,35628,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	63331403	63336023	chr18:63331403-63336023	0	-	63331403	63331403	8553170	2	498,767,	0,3853,
#Partially deleted in new
chr18	63331642	63346616	chr18:63331642-63346616	0	-	63331642	63331642	8553170	5	259,102,84,84,159,	0,3614,7157,12767,14815,
#Partially deleted in new
chr18	63331650	63367204	chr18:63331650-63367204	1	-	63331781	63367118	789624	9	251,102,84,84,96,66,57,90,194,	0,3606,7149,12759,23553,23847,28085,31128,35360,
#Partially deleted in new
chr18	63344341	63355514	chr18:63344341-63355514	0	-	63344341	63344341	8553170	4	152,190,96,17,	0,6546,10862,11156,
#Partially deleted in new
chr18	63351014	63367204	chr18:63351014-63367204	0	-	63351014	63367118	789624	6	65,81,66,57,90,194,	0,4204,4483,8721,11764,15996,
#Partially deleted in new
chr18	63355315	63367203	chr18:63355315-63367203	0	-	63355315	63355315	8553170	4	248,57,90,193,	0,4420,7463,11695,
#Partially deleted in new
chr18	63359524	63367128	chr18:63359524-63367128	0	-	63359524	63359524	8553170	3	268,90,118,	0,3254,7486,
#Partially deleted in new
chr18	63362842	63367206	chr18:63362842-63367206	0	-	63362842	63362842	8553170	3	26,347,196,	0,3119,4168,
#Partially deleted in new
chr18	63367327	63381629	chr18:63367327-63381629	3	+	63367327	63367327	8553170	2	532,253,	0,14049,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr18	63389189	63422463	chr18:63389189-63422463	3	-	63390974	63422259	0	11	1887,141,220,82,149,157,120,68,157,112,231,	0,4219,7844,10052,10858,11357,14517,18242,21100,22277,33043,
#Partially deleted in new
chr18	63390862	63397124	chr18:63390862-63397124	0	-	63390862	63390862	8553170	3	214,158,91,	0,2546,6171,
#Partially deleted in new
chr18	63393443	63422463	chr18:63393443-63422463	0	-	63403786	63422259	789624	8	106,220,149,157,120,157,112,231,	0,3590,6604,7103,10263,16846,18023,28789,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	63396341	63422483	chr18:63396341-63422483	0	-	63396341	63396341	8553170	9	912,82,149,157,120,68,157,112,251,	0,2900,3706,4205,7365,11090,13948,15125,25891,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	63396589	63422463	chr18:63396589-63422463	0	-	63396589	63396589	8553170	8	664,82,149,157,120,157,112,231,	0,2652,3458,3957,7117,13700,14877,25643,
#Partially deleted in new
chr18	63399254	63404714	chr18:63399254-63404714	0	-	63399254	63399254	8553170	5	69,149,157,120,206,	0,793,1292,4452,5254,
#Partially deleted in new
chr18	63407375	63422390	chr18:63407375-63422390	1	-	63407408	63422259	789624	4	124,157,112,158,	0,2914,4091,14857,
#Deleted in new
chr18	63415316	63416469	chr18:63415316-63416469	7	-	63415316	63415316	16724991	1	1153,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	63476760	63505085	chr18:63476760-63505085	3	+	63484428	63503722	0	7	285,175,138,118,143,168,1756,	0,7661,10185,12586,16192,22359,26569,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	63476957	63493701	chr18:63476957-63493701	1	+	63484428	63493224	0	5	88,175,138,118,749,	0,7464,9988,12389,15995,
#Partially deleted in new
chr18	63477126	63489427	chr18:63477126-63489427	0	+	63484428	63489427	789624	4	166,175,138,81,	0,7295,9819,12220,
#Deleted in new
chr18	63485600	63486018	chr18:63485600-63486018	3	+	63485600	63485600	8553170	1	418,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	63486676	63489463	chr18:63486676-63489463	0	+	63486676	63486676	8553170	2	407,117,	0,2670,
#Partially deleted in new
chr18	63490617	63503375	chr18:63490617-63503375	0	+	63490617	63490617	8553170	4	97,143,168,46,	0,2335,8502,12712,
#Partially deleted in new
chr18	63490626	63503397	chr18:63490626-63503397	0	+	63490626	63490626	8553170	4	106,143,168,68,	0,2326,8493,12703,
#Deleted in new
chr18	63496988	63497400	chr18:63496988-63497400	7	+	63496988	63496988	16724991	1	412,	0,
#Partially deleted in new
chr18	63556159	63567011	chr18:63556159-63567011	1	+	63556159	63567011	789624	7	168,75,141,118,143,168,405,	0,2192,3418,4925,7818,9285,10447,
#Partially deleted in new
chr18	63556159	63567011	chr18:63556159-63567011	3	+	63556159	63567011	789624	7	168,135,141,118,143,168,405,	0,2192,3418,4925,7818,9285,10447,
#Partially deleted in new
chr18	63586988	63592884	chr18:63586988-63592884	0	+	63587093	63592884	789624	6	139,39,182,60,129,31,	0,423,1662,2667,5359,5865,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	63587299	63599198	chr18:63587299-63599198	1	+	63588667	63597363	789624	8	151,182,87,129,118,143,156,2240,	0,1351,2356,5048,5554,7055,7729,9659,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	63587365	63599199	chr18:63587365-63599199	3	+	63588667	63597363	789624	8	85,182,60,129,118,143,156,2241,	0,1285,2290,4982,5488,6989,7663,9593,
#Partially deleted in new
chr18	63587395	63590018	chr18:63587395-63590018	0	+	63587395	63587395	8553170	3	55,182,363,	0,1255,2260,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	63587428	63598743	chr18:63587428-63598743	0	+	63588667	63594054	789624	9	22,182,57,129,118,213,143,156,1785,	0,1222,2227,4919,5425,6597,6926,7600,9530,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	63588730	63604639	chr18:63588730-63604639	0	+	63588730	63603996	789624	4	102,60,156,700,	0,925,6298,15209,
#Partially deleted in new
chr18	63637258	63644298	chr18:63637258-63644298	3	-	63637718	63643577	789624	8	865,156,143,118,129,57,191,90,	0,1926,2375,3615,4501,5902,6154,6950,
#Partially deleted in new
chr18	63637717	63643582	chr18:63637717-63643582	0	-	63637718	63643582	789624	7	406,93,143,118,129,57,170,	0,1467,1916,3156,4042,5443,5695,
#Deleted in new
chr18	63639188	63644256	chr18:63639188-63644256	0	-	63639188	63643577	789624	6	152,143,118,57,191,48,	0,445,1685,3972,4224,5020,
#Deleted in new
chr18	63642896	63644255	chr18:63642896-63644255	0	-	63642896	63642896	8553170	3	321,191,47,	0,516,1312,
#Partially deleted in new
chr18	63647578	63720080	chr18:63647578-63720080	0	+	63710193	63720080	789624	7	64,620,183,60,129,118,68,	0,7778,62600,63756,64986,68456,72434,
#Partially deleted in new
chr18	63655196	63661963	chr18:63655196-63661963	3	-	63655656	63661216	0	8	865,156,143,118,129,57,191,118,	0,1634,2073,3316,4202,5603,5855,6649,
#Partially deleted in new
chr18	63655197	63661884	chr18:63655197-63661884	1	-	63655656	63661216	0	7	864,143,118,129,57,191,39,	0,2072,3315,4201,5602,5854,6648,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	63702303	63723893	chr18:63702303-63723893	3	+	63710193	63723399	789624	9	74,156,183,60,129,118,143,156,899,	0,547,7875,9031,10261,13731,17709,18527,20691,
#Partially deleted in new
chr18	63702848	63723893	chr18:63702848-63723893	1	+	63710193	63723399	789624	8	158,183,60,129,118,143,156,899,	0,7330,8486,9716,13186,17164,17982,20146,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	63702959	63726432	chr18:63702959-63726432	0	+	63702959	63702959	8553170	10	47,86,183,60,129,118,143,156,107,87,	0,2301,7219,8375,9605,13075,17053,17871,20035,23386,
#Partially deleted in new
chr18	63702959	63723570	chr18:63702959-63723570	0	+	63710193	63720063	789624	7	47,183,60,129,143,156,576,	0,7219,8375,9605,17053,17871,20035,
#Partially deleted in new
chr18	63702959	63720622	chr18:63702959-63720622	0	+	63702959	63702959	8553170	6	47,183,60,129,118,610,	0,7219,8375,9605,13075,17053,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	63702959	63705798	chr18:63702959-63705798	0	+	63702959	63702959	8553170	2	47,538,	0,2301,
#Partially deleted in new
chr18	63710193	63723399	chr18:63710193-63723399	1	+	63710193	63723399	789624	5	168,60,129,156,405,	0,1141,2371,10637,12801,
#Partially deleted in new
chr18	63710193	63723399	chr18:63710193-63723399	1	+	63710193	63723399	789624	2	168,405,	0,12801,
#Partially deleted in new
chr18	63752934	63796312	chr18:63752934-63796312	0	+	63782372	63796312	789624	5	186,186,51,117,47,	0,29420,39458,40226,43331,
#Partially deleted in new
chr18	63753046	63805376	chr18:63753046-63805376	3	+	63782372	63804635	789624	8	74,186,51,117,118,143,147,1140,	0,29308,39346,40114,43219,45557,47819,51190,
#Partially deleted in new
chr18	63775374	63805376	chr18:63775374-63805376	1	+	63782372	63804635	789624	7	342,186,117,118,143,147,1140,	0,6980,17786,20891,23229,25491,28862,
#Partially deleted in new
chr18	63775409	63805370	chr18:63775409-63805370	1	+	63782372	63804635	789624	8	307,186,51,117,118,143,147,1134,	0,6945,16983,17751,20856,23194,25456,28827,
#Partially deleted in new
chr18	63777776	63798643	chr18:63777776-63798643	0	+	63782372	63798643	789624	6	49,186,51,117,118,40,	0,4578,14616,15384,18489,20827,
#Partially deleted in new
chr18	63777776	63805376	chr18:63777776-63805376	1	+	63782372	63804635	789624	8	49,186,51,117,118,143,147,1140,	0,4578,14616,15384,18489,20827,23089,26460,
#Partially deleted in new
chr18	63777976	63796313	chr18:63777976-63796313	0	+	63782372	63796313	789624	5	158,186,51,117,48,	0,4378,14416,15184,18289,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	63871691	63897143	chr18:63871691-63897143	0	+	63891444	63897143	789624	5	109,258,177,120,53,	0,18146,19744,23572,25399,
#Partially deleted in new
chr18	63887699	63903890	chr18:63887699-63903890	3	+	63891444	63903305	0	8	71,177,120,129,118,143,165,990,	0,3736,7564,9391,10027,14040,14704,15201,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	63887704	63903879	chr18:63887704-63903879	1	+	63891444	63903305	0	9	66,258,177,120,129,118,143,165,979,	0,2133,3731,7559,9386,10022,14035,14699,15196,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	63887758	63897792	chr18:63887758-63897792	0	+	63891444	63897792	789624	6	12,258,177,120,129,66,	0,2079,3677,7505,9332,9968,
#Partially deleted in new
chr18	63890556	63897200	chr18:63890556-63897200	0	+	63891444	63897200	789624	4	344,177,120,110,	0,879,4707,6534,
#Partially deleted in new
chr18	63892616	63902553	chr18:63892616-63902553	0	+	63892616	63892616	8553170	6	124,120,129,118,143,150,	0,2647,4474,5110,9123,9787,
#Partially deleted in new
chr18	63897173	63917490	chr18:63897173-63917490	0	+	63897173	63917490	789624	8	46,118,143,165,75,81,177,35,	0,553,4566,5230,5727,10786,18328,20282,
#Partially deleted in new
chr18	63897173	63917490	chr18:63897173-63917490	0	+	63897173	63917490	789624	7	46,118,143,165,75,177,35,	0,553,4566,5230,5727,18328,20282,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	63907990	63936111	chr18:63907990-63936111	3	+	63915510	63935242	789624	8	50,177,66,138,118,143,156,1274,	0,7511,9465,9974,11797,22054,25057,26847,
#Partially deleted in new
chr18	63915510	63935242	chr18:63915510-63935242	1	+	63915510	63935242	789624	7	168,66,138,118,143,156,405,	0,1945,2454,4277,14534,17537,19327,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	63949300	63961834	chr18:63949300-63961834	3	+	63953455	63960355	789624	4	100,174,150,1677,	0,4053,5107,10857,
#Partially deleted in new
chr18	63949356	63981774	chr18:63949356-63981774	0	+	63949356	63949356	8553170	6	44,150,118,178,138,54,	0,5051,10801,28942,30444,32364,
#Partially deleted in new
chr18	63954438	63960200	chr18:63954438-63960200	1	+	63954438	63960200	789624	2	119,43,	0,5719,
#Partially deleted in new
chr18	63960181	63968786	chr18:63960181-63968786	0	+	63960181	63960181	8553170	2	94,449,	0,8156,
#Partially deleted in new
chr18	63966405	63970181	chr18:63966405-63970181	3	-	63966405	63966405	8553170	3	463,287,859,	0,1581,2917,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	63969924	63989374	chr18:63969924-63989374	3	+	63978308	63987278	789624	7	246,178,138,118,143,153,2501,	0,8374,9876,11796,13654,15168,16949,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	63970028	63989371	chr18:63970028-63989371	1	+	63978308	63987278	789624	7	159,178,138,118,143,153,2498,	0,8270,9772,11692,13550,15064,16845,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	63970028	63989371	chr18:63970028-63989371	1	+	63983700	63987278	789624	6	142,138,118,143,153,2498,	0,9772,11692,13550,15064,16845,
#Partially deleted in new
chr18	63970113	64019779	chr18:63970113-64019779	1	+	63978308	64004878	789624	8	57,178,138,118,143,153,62,870,	0,8185,9687,11607,13465,14979,34705,48796,
#Partially deleted in new
chr18	63970118	63986653	chr18:63970118-63986653	1	+	63978308	63986266	789624	7	52,178,138,118,143,153,396,	0,8180,9682,11602,13460,14974,16139,
#Partially deleted in new
chr18	63970248	63981786	chr18:63970248-63981786	0	+	63978308	63981786	789624	4	198,178,138,66,	0,8050,9552,11472,
#Partially deleted in new
chr18	63970504	63983647	chr18:63970504-63983647	0	+	63978308	63983647	789624	5	61,178,138,118,69,	0,7794,9296,11216,13074,
#Partially deleted in new
chr18	63979807	63987396	chr18:63979807-63987396	0	+	63979807	63986986	789624	5	131,118,143,153,434,	0,1913,3771,5285,7155,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	63985175	64005667	chr18:63985175-64005667	0	+	63985175	64004878	789624	2	70,849,	0,19643,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	64041554	64159293	chr18:64041554-64159293	1	+	64041554	64041554	8553170	6	675,153,60,55,43,431,	0,30946,49412,85830,114669,117308,
#Deleted in new
chr18	64072157	64072653	chr18:64072157-64072653	7	+	64072157	64072157	16724991	1	496,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	64080008	64149030	chr18:64080008-64149030	3	-	64080008	64080008	789624	4	394,159,64,256,	0,17825,18568,68766,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	64080301	64098610	chr18:64080301-64098610	0	-	64080301	64080301	8553170	3	101,204,34,	0,17532,18275,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	64104090	64423601	chr18:64104090-64423601	3	+	64104090	64104090	5263520	10	145,55,93,98,189,138,79,180,75,670,	0,23294,145210,183704,189836,303030,308214,311841,318639,318841,
#Partially deleted in new
chr18	64139452	64148874	chr18:64139452-64148874	0	-	64139452	64139452	8553170	2	117,100,	0,9322,
#Partially deleted in new
chr18	64147208	64159294	chr18:64147208-64159294	0	+	64147208	64147208	8553170	3	162,43,432,	0,9015,11654,
#Deleted in new
chr18	64156214	64159299	chr18:64156214-64159299	0	+	64156214	64156214	8553170	3	52,126,204,	0,2648,2881,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	64181313	64259994	chr18:64181313-64259994	3	-	64181313	64181313	8553170	4	446,299,302,80,	0,11210,76904,78601,
#Partially deleted in new
chr18	64213081	64260055	chr18:64213081-64260055	1	-	64213081	64213081	789624	3	1965,302,141,	0,45136,46833,
#Partially deleted in new
chr18	64677795	64677993	chr18:64677795-64677993	7	-	64677795	64677795	16724991	1	198,	0,
#Partially deleted in new
chr18	65105872	65125710	chr18:65105872-65125710	3	-	65105872	65105872	8553170	2	131,111,	0,19727,
#Deleted in new
chr18	65186158	65187018	chr18:65186158-65187018	3	+	65186158	65186158	8553170	2	100,89,	0,771,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	65424012	65447512	chr18:65424012-65447512	3	+	65424012	65424012	8553170	3	59,134,366,	0,17677,23134,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	65606089	65652053	chr18:65606089-65652053	3	+	65606089	65606089	8553170	4	393,178,112,169,	0,500,36568,45795,
#Partially deleted in new
chr18	65750251	65880939	chr18:65750251-65880939	1	+	65762842	65880894	789624	12	129,406,295,120,168,188,254,137,122,118,252,539,	0,12395,59452,64233,71829,74392,93560,107564,108673,109456,112414,130149,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr18	65750652	65864125	chr18:65750652-65864125	1	+	65762842	65862946	789624	11	498,406,295,120,168,188,254,137,122,118,1460,	0,11994,59051,63832,71428,73991,93159,107163,108272,109055,112013,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr18	65750920	65890341	chr18:65750920-65890341	3	+	65762842	65880894	789624	12	230,406,295,120,168,188,254,137,122,118,252,9941,	0,11726,58783,63564,71160,73723,92891,106895,108004,108787,111745,129480,
#Partially deleted in new
chr18	65763007	65803810	chr18:65763007-65803810	0	+	65763007	65763007	8553170	2	45,696,	0,40107,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	65865261	65866397	chr18:65865261-65866397	3	+	65865261	65865261	8553170	2	757,35,	0,1101,
#Partially deleted in new
chr18	65917781	65920942	chr18:65917781-65920942	3	-	65917781	65917781	8553170	2	223,89,	0,3072,
#Partially deleted in new
chr18	66068749	66069647	chr18:66068749-66069647	7	-	66068749	66068749	16724991	1	898,	0,
#Partially deleted in new
chr18	66501082	66604134	chr18:66501082-66604134	3	-	66504811	66572204	789624	12	4220,252,118,122,122,254,185,165,120,295,307,181,	0,7912,10485,28762,33903,42888,43636,50011,53322,67333,70927,102871,
#Partially deleted in new
chr18	66504811	66604138	chr18:66504811-66604138	0	-	66509168	66572204	789624	12	491,224,118,122,122,254,185,165,120,295,307,185,	0,4183,6756,25033,30174,39159,39907,46282,49593,63604,67198,99142,
#Partially deleted in new
chr18	66505044	66604088	chr18:66505044-66604088	1	-	66505287	66572204	789624	10	258,122,122,254,185,165,120,295,307,135,	0,24800,29941,38926,39674,46049,49360,63371,66965,98909,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	66532338	66572171	chr18:66532338-66572171	0	-	66532710	66572171	789624	8	374,122,254,185,165,120,295,162,	0,2647,11632,12380,18755,22066,36077,39671,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	66572009	66604088	chr18:66572009-66604088	0	-	66572009	66572204	789624	3	307,145,135,	0,24149,31944,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	66946115	66946222	chr18:66946115-66946222	3	+	66946115	66946115	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	67081583	67081686	chr18:67081583-67081686	3	+	67081583	67081583	5263520	1	103,	0,
#Deleted in new
chr18	67137610	67137751	chr18:67137610-67137751	7	-	67137610	67137610	16724991	1	141,	0,
#Deleted in new
chr18	67375132	67375305	chr18:67375132-67375305	7	+	67375132	67375132	16724991	1	173,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	67481790	67484966	chr18:67481790-67484966	3	-	67481790	67481790	8553170	1	3176,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	67506581	67516980	chr18:67506581-67516980	3	-	67510969	67514638	789624	2	8911,620,	0,9779,
#Partially deleted in new
chr18	67506588	67511296	chr18:67506588-67511296	0	+	67506588	67506588	8553170	2	307,247,	0,4461,
#Partially deleted in new
chr18	67506588	67514030	chr18:67506588-67514030	3	+	67506588	67506588	8553170	2	291,2998,	0,4444,
#Partially deleted in new
chr18	67516545	67899619	chr18:67516545-67899619	3	+	67516545	67516545	789624	5	204,72,105,170,2440,	0,317873,319608,357541,380634,
#Deleted in new
chr18	67602691	67603022	chr18:67602691-67603022	7	-	67602691	67602691	16724991	1	331,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	67672220	67676078	chr18:67672220-67676078	3	-	67672220	67672220	8553170	3	144,87,57,	0,305,3801,
#Deleted in new
chr18	67707928	67708246	chr18:67707928-67708246	7	-	67707928	67707928	16724991	1	318,	0,
#Partially deleted in new
chr18	67788267	67791035	chr18:67788267-67791035	7	-	67788267	67788267	16724991	2	1905,579,	0,2189,
#Deleted in new
chr18	67830670	67831967	chr18:67830670-67831967	7	-	67830670	67830670	16724991	1	1297,	0,
#Partially deleted in new
chr18	67940948	67956426	chr18:67940948-67956426	3	+	67940948	67940948	8553170	3	22,150,268,	0,9740,15210,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	68258338	68264827	chr18:68258338-68264827	3	-	68258338	68258338	8553170	5	227,94,46,105,24,	0,1942,3286,5160,6465,
#Deleted in new
chr18	68277801	68278243	chr18:68277801-68278243	7	-	68277801	68277801	16724991	1	442,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	68427029	68436918	chr18:68427029-68436918	3	+	68427029	68427029	8553170	4	297,58,51,349,	0,5927,9381,9540,
#Deleted in new
chr18	68455950	68456877	chr18:68455950-68456877	7	+	68455950	68455950	16724991	1	927,	0,
#Deleted in new
chr18	68527969	68528123	chr18:68527969-68528123	7	+	68527969	68527969	16724991	1	154,	0,
#Partially deleted in new
chr18	68673687	68715298	chr18:68673687-68715298	3	-	68676932	68714981	789624	16	3506,69,130,57,54,58,99,67,78,100,81,46,124,40,55,363,	0,5775,7293,9237,10502,10740,13979,17607,23538,24244,26717,28057,36333,37676,40158,41248,
#Deleted in new
chr18	68676709	68679577	chr18:68676709-68679577	0	-	68676709	68676709	8553170	2	484,115,	0,2753,
#Partially deleted in new
chr18	68676838	68715077	chr18:68676838-68715077	0	-	68700480	68714981	789624	15	355,69,130,57,54,58,99,67,78,100,81,124,40,55,142,	0,2624,4142,6086,7351,7589,10828,14456,20387,21093,23566,33182,34525,37007,38097,
#Partially deleted in new
chr18	68682924	68687977	chr18:68682924-68687977	0	-	68682924	68682924	8553170	4	57,54,58,311,	0,1265,1503,4742,
#Partially deleted in new
chr18	68688416	68691353	chr18:68688416-68691353	0	-	68688416	68688416	8553170	2	638,59,	0,2878,
#Partially deleted in new
chr18	68689686	68715035	chr18:68689686-68715035	0	-	68700480	68714981	789624	9	295,67,78,100,81,124,40,55,100,	0,1608,7539,8245,10718,20334,21677,24159,25249,
#Partially deleted in new
chr18	68691013	68715057	chr18:68691013-68715057	1	-	68691256	68714981	789624	8	348,78,100,46,124,40,55,122,	0,6212,6918,10731,19007,20350,22832,23922,
#Partially deleted in new
chr18	68696935	68715058	chr18:68696935-68715058	1	-	68697207	68714981	789624	8	368,100,81,46,124,40,55,123,	0,996,3469,4809,13085,14428,16910,18000,
#Partially deleted in new
chr18	68697225	68715065	chr18:68697225-68715065	0	-	68700480	68714981	789624	7	78,100,81,46,40,55,130,	0,706,3179,4519,14138,16620,17710,
#Partially deleted in new
chr18	68697225	68715069	chr18:68697225-68715069	0	-	68700461	68714981	789624	9	78,100,81,52,46,124,40,55,134,	0,706,3179,4390,4519,12795,14138,16620,17710,
#Partially deleted in new
chr18	68697375	68700423	chr18:68697375-68700423	0	-	68697375	68697375	8553170	2	656,19,	0,3029,
#Partially deleted in new
chr18	68697930	68714443	chr18:68697930-68714443	0	-	68700480	68713886	789624	6	101,81,124,40,55,181,	0,2474,12090,13433,15915,16332,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	68715208	68718130	chr18:68715208-68718130	0	+	68715208	68715208	8553170	3	403,67,127,	0,1319,2795,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	68715234	68837040	chr18:68715234-68837040	0	+	68836763	68837040	789624	4	127,67,51,292,	0,1293,108131,121514,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	68715274	68837135	chr18:68715274-68837135	0	+	68836763	68837135	789624	3	87,67,387,	0,1253,121474,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	68715274	68874709	chr18:68715274-68874709	0	+	68836763	68874709	789624	7	87,67,33,621,221,109,41,	0,1253,19459,121474,123431,131038,159394,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	68715312	68755005	chr18:68715312-68755005	0	+	68715312	68715312	8553170	4	49,67,33,1710,	0,1215,19421,37983,
#Deleted in new
chr18	68721081	68721560	chr18:68721081-68721560	3	+	68721081	68721081	8553170	1	479,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	68753178	68754583	chr18:68753178-68754583	3	-	68753178	68753178	8553170	2	218,84,	0,1321,
#Partially deleted in new
chr18	68798079	69055189	chr18:68798079-69055189	3	+	68836763	69054137	789624	8	102,621,221,109,117,210,171,1160,	0,38669,40626,48233,76589,99139,212854,255950,
#Partially deleted in new
chr18	68798414	68837175	chr18:68798414-68837175	0	+	68836763	68837175	789624	2	38,427,	0,38334,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	68823373	68897793	chr18:68823373-68897793	0	+	68823373	68823373	8553170	7	43,621,221,109,117,210,216,	0,13375,15332,22939,51295,73845,74204,
#Partially deleted in new
chr18	68836763	69011224	chr18:68836763-69011224	1	+	68836763	69011122	789624	6	606,221,109,117,210,291,	0,1942,9549,37905,60455,174170,
#Partially deleted in new
chr18	68846363	68897632	chr18:68846363-68897632	0	+	68846363	68846363	8553170	3	58,117,414,	0,28305,50855,
#Partially deleted in new
chr18	68846394	68874965	chr18:68846394-68874965	0	+	68846394	68846394	8553170	2	27,297,	0,28274,
#Deleted in new
chr18	68866516	68867028	chr18:68866516-68867028	7	+	68866516	68866516	16724991	1	512,	0,
#Partially deleted in new
chr18	68899780	68902255	chr18:68899780-68902255	3	-	68899780	68899780	8553170	2	491,68,	0,2407,
#Partially deleted in new
chr18	68899784	68902255	chr18:68899784-68902255	0	-	68899784	68899784	8553170	2	453,68,	0,2403,
#Deleted in new
chr18	68908047	68908599	chr18:68908047-68908599	3	+	68908047	68908047	8553170	1	552,	0,
#Deleted in new
chr18	68992717	68993375	chr18:68992717-68993375	7	-	68992717	68992717	16724991	1	658,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	69212276	69214350	chr18:69212276-69214350	3	+	69212276	69212276	8553170	1	2074,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	69240447	69250781	chr18:69240447-69250781	3	-	69240447	69240447	8553170	4	2794,171,92,192,	0,4689,5011,10142,
#Deleted in new
chr18	69398725	69399249	chr18:69398725-69399249	3	-	69398725	69398725	8553170	1	524,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr18	69401054	69849087	chr18:69401054-69849087	3	+	69401244	69841383	789624	8	256,108,115,120,190,139,118,7844,	0,163432,198329,276679,297349,337910,356701,440189,
#Deleted in new
chr18	69469516	69470001	chr18:69469516-69470001	5	+	69469516	69469516	16724991	2	219,117,	0,368,
#Partially deleted in new
chr18	69469930	69471736	chr18:69469930-69471736	7	+	69469930	69469930	16724991	2	213,134,	0,1672,
#Partially deleted in new
chr18	69643674	69698525	chr18:69643674-69698525	0	+	69643674	69643674	8553170	4	116,144,120,122,	0,3731,34059,54729,
#Partially deleted in new
chr18	69643687	69739080	chr18:69643687-69739080	0	+	69643687	69643687	8553170	4	103,120,190,116,	0,34046,54716,95277,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	69659836	69663413	chr18:69659836-69663413	3	+	69659836	69659836	8553170	1	3577,	0,
#Partially deleted in new
chr18	69677733	69739160	chr18:69677733-69739160	0	+	69677733	69739124	789624	3	120,190,196,	0,20670,61231,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	69704977	69724975	chr18:69704977-69724975	3	-	69704977	69704977	8553170	3	220,97,166,	0,16342,19832,
#Partially deleted in new
chr18	69738984	69781422	chr18:69738984-69781422	0	+	69738984	69738984	8553170	4	119,118,61,119,	0,18771,38904,42319,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	69831157	69895809	chr18:69831157-69895809	0	-	69842390	69895809	789624	4	49,204,112,109,	0,1378,11126,64543,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	69853274	69956996	chr18:69853274-69956996	3	-	69864313	69947406	789624	7	11165,55,103,345,336,73,242,	0,14082,19869,42426,93459,94086,103480,
#Partially deleted in new
chr18	69862955	69956924	chr18:69862955-69956924	1	-	69864313	69895962	789624	5	1484,55,103,345,170,	0,4401,10188,32745,93799,
#Partially deleted in new
chr18	69864114	69947419	chr18:69864114-69947419	1	-	69864313	69895962	789624	7	325,55,103,345,85,37,59,	0,3242,9029,31586,80369,82619,83246,
#Partially deleted in new
chr18	69864313	69947853	chr18:69864313-69947853	1	-	69864313	69947406	789624	6	126,55,103,345,336,493,	0,3043,8830,31387,82420,83047,
#Partially deleted in new
chr18	69873143	69961803	chr18:69873143-69961803	0	-	69873143	69947406	789624	5	103,345,336,172,212,	0,22557,73590,74217,88448,
#Partially deleted in new
chr18	69896031	69956670	chr18:69896031-69956670	0	-	69896031	69947406	789624	4	14,336,172,57,	0,50702,51329,60582,
#Partially deleted in new
chr18	69946733	69957176	chr18:69946733-69957176	0	-	69946733	69947406	789624	3	336,172,422,	0,627,10021,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr18	70003030	70059943	chr18:70003030-70059943	0	-	70053449	70059943	789624	15	1206,70,104,268,203,127,78,98,106,218,138,220,154,91,94,	0,2167,3350,14376,17584,21691,25693,26981,27845,44940,48380,50264,51100,54711,56819,
#Boundary problem: need 49, got 0, diff 49, mapped 0.0
chr18	70003030	70205945	chr18:70003030-70205945	3	-	70004150	70205658	789624	49	1206,70,104,268,203,127,78,98,106,218,138,154,91,193,94,89,190,72,159,111,129,220,155,145,240,189,69,97,118,89,100,172,137,117,126,127,113,213,171,116,182,166,148,115,91,90,178,188,318,	0,2167,3350,14376,17584,21691,25693,26981,27845,44940,48380,51100,54711,56819,62798,70875,72321,83582,84958,89079,89645,106467,111414,118525,124471,125327,131442,132153,136568,137069,139257,142581,145870,146940,147577,163031,163888,165824,173644,185077,187507,190257,193470,194593,196383,198863,201055,202097,202597,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	70003070	70031414	chr18:70003070-70031414	1	-	70004150	70031349	789624	10	1166,70,104,268,203,127,78,98,106,113,	0,2127,3310,14336,17544,21651,25653,26941,27805,28231,
#Partially deleted in new
chr18	70003803	70205658	chr18:70003803-70205658	1	-	70004160	70205658	789624	49	365,70,104,268,203,127,78,98,106,218,138,154,91,193,94,89,190,72,159,111,129,220,155,145,240,189,69,97,118,89,100,172,137,117,126,127,113,213,171,116,182,166,148,115,91,90,178,188,31,	0,1394,2577,13603,16811,20918,24920,26208,27072,44167,47607,50327,53938,56046,62025,70102,71548,82809,84185,88306,88872,105694,110641,117752,123698,124554,130669,131380,135795,136296,138484,141808,145097,146167,146804,162258,163115,165051,172871,184304,186734,189484,192697,193820,195610,198090,200282,201324,201824,
#Partially deleted in new
chr18	70003803	70197686	chr18:70003803-70197686	0	-	70139657	70197686	789624	43	433,70,104,237,203,127,78,98,106,218,138,154,91,193,94,89,190,72,159,111,129,220,155,145,240,189,69,97,118,100,172,137,117,126,127,113,213,171,116,182,166,148,63,	0,1394,2577,13603,16811,20918,24920,26208,27072,44167,47607,50327,53938,56046,62025,70102,71548,82809,84185,88306,88872,105694,110641,117752,123698,124554,130669,131380,135795,138484,141808,145097,146167,146804,162258,163115,165051,172871,184304,186734,189484,192697,193820,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	70003819	70009032	chr18:70003819-70009032	0	-	70003819	70003819	8553170	3	417,1869,1657,	0,1378,3556,
#Partially deleted in new
chr18	70003829	70020788	chr18:70003829-70020788	0	-	70003829	70003829	8553170	4	407,1287,268,174,	0,1368,13577,16785,
#Partially deleted in new
chr18	70003839	70109581	chr18:70003839-70109581	0	-	70059913	70109581	789624	21	397,70,104,268,203,127,78,98,106,218,138,154,91,193,89,190,72,159,111,129,84,	0,1358,2541,13567,16775,20882,24884,26172,27036,44131,47571,50291,53902,56010,70066,71512,82773,84149,88270,88836,105658,
#Partially deleted in new
chr18	70003858	70139932	chr18:70003858-70139932	0	-	70003858	70003858	8553170	29	378,70,104,268,231,127,78,98,106,218,138,154,91,193,94,89,190,72,159,111,129,220,155,145,240,189,69,97,334,	0,1339,2522,13548,16756,20863,24865,26153,27017,44112,47552,50272,53883,55991,61970,70047,71493,82754,84130,88251,88817,105639,110586,117697,123643,124499,130614,131325,135740,
#Partially deleted in new
chr18	70003968	70205700	chr18:70003968-70205700	0	-	70168946	70205658	789624	48	268,70,104,268,203,127,78,98,106,218,138,154,91,193,94,89,190,72,159,111,129,220,155,145,240,189,69,97,118,100,172,137,117,126,127,113,119,171,116,182,166,148,115,91,90,178,188,73,	0,1229,2412,13438,16646,20753,24755,26043,26907,44002,47442,50162,53773,55881,61860,69937,71383,82644,84020,88141,88707,105529,110476,117587,123533,124389,130504,131215,135630,138319,141643,144932,146002,146639,162093,162950,164886,172706,184139,186569,189319,192532,193655,195445,197925,200117,201159,201659,
#Partially deleted in new
chr18	70006474	70021160	chr18:70006474-70021160	0	-	70006474	70006474	8553170	3	10,268,546,	0,10932,14140,
#Deleted in new
chr18	70017590	70019874	chr18:70017590-70019874	0	-	70017590	70017590	8553170	2	84,585,	0,1699,
#Partially deleted in new
chr18	70019501	70028757	chr18:70019501-70028757	0	-	70019501	70019501	8553170	4	419,203,127,34,	0,1113,5220,9222,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr18	70060034	70139607	chr18:70060034-70139607	0	-	70061365	70139607	789624	17	8,89,94,89,190,72,159,111,129,220,155,145,240,189,69,97,9,	0,1277,5794,13871,15317,26578,27954,32075,32641,49463,54410,61521,67467,68323,74438,75149,79564,
#Partially deleted in new
chr18	70065842	70205661	chr18:70065842-70205661	0	-	70150134	70205658	789624	35	80,89,190,72,159,111,129,220,155,145,240,189,69,97,118,89,100,172,137,182,126,127,113,213,171,116,182,166,148,115,91,90,178,188,34,	0,8063,9509,20770,22146,26267,26833,43655,48602,55713,61659,62515,68630,69341,73756,74257,76445,79769,83058,84128,84765,100219,101076,103012,110832,122265,124695,127445,130658,131781,133571,136051,138243,139285,139785,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	70074758	70131932	chr18:70074758-70131932	0	-	70074758	70074758	8553170	10	783,72,159,111,129,220,155,145,240,3575,	0,11854,13230,17351,17917,34739,39686,46797,52743,53599,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	70091544	70109693	chr18:70091544-70109693	0	-	70091544	70091544	8553170	4	136,111,129,196,	0,565,1131,17953,
#Partially deleted in new
chr18	70092186	70199472	chr18:70092186-70199472	0	-	70092186	70199472	789624	25	34,129,220,155,145,189,69,97,118,89,100,172,137,117,126,127,113,213,171,116,182,166,148,115,59,	0,489,17311,22258,29369,36171,42286,42997,47412,47913,50101,53425,56714,57784,58421,73875,74732,76668,84488,95921,98351,101101,104314,105437,107227,
#Partially deleted in new
chr18	70109497	70128444	chr18:70109497-70128444	0	-	70109497	70128444	789624	6	220,155,145,240,45,87,	0,4947,12058,18004,18556,18860,
#Partially deleted in new
chr18	70138262	70150018	chr18:70138262-70150018	0	-	70138262	70138262	8553170	7	693,118,89,100,172,137,48,	0,1336,1837,4025,7349,10638,11708,
#Partially deleted in new
chr18	70166433	70205726	chr18:70166433-70205726	0	-	70166433	70166433	8553170	13	598,213,171,116,182,166,148,115,91,90,178,188,99,	0,2421,10241,21674,24104,26854,30067,31190,32980,35460,37652,38694,39194,
#Partially deleted in new
chr18	70193010	70205194	chr18:70193010-70205194	0	-	70193010	70193010	8553170	7	443,148,115,91,90,178,67,	0,3490,4613,6403,8883,11075,12117,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	70194145	70201930	chr18:70194145-70201930	0	-	70194145	70194145	8553170	5	591,148,115,91,37,	0,2355,3478,5268,7748,
#Partially deleted in new
chr18	70288900	70330200	chr18:70288900-70330200	3	+	70324668	70326276	0	2	190,5658,	0,35642,
#Partially deleted in new
chr18	70296598	70325351	chr18:70296598-70325351	0	+	70324668	70325351	789624	2	85,809,	0,27944,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	70335438	70352459	chr18:70335438-70352459	3	+	70335438	70335438	789624	4	68,83,183,481,	0,619,883,16540,
#Deleted in new
chr18	70335928	70337310	chr18:70335928-70337310	3	-	70335928	70335928	8553170	2	287,97,	0,1285,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	70336447	70352119	chr18:70336447-70352119	0	+	70336447	70336447	8553170	4	57,82,143,141,	0,3352,12524,15531,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	70380139	70384591	chr18:70380139-70384591	3	-	70380139	70380139	789624	3	2290,226,121,	0,2977,4331,
#Partially deleted in new
chr18	70412054	70412391	chr18:70412054-70412391	7	+	70412054	70412054	16724991	1	337,	0,
#Partially deleted in new
chr18	70430230	70431125	chr18:70430230-70431125	7	+	70430230	70430230	16724991	1	895,	0,
#Deleted in new
chr18	70489629	70491205	chr18:70489629-70491205	3	+	70489629	70489629	8553170	1	1576,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	70512726	70513008	chr18:70512726-70513008	3	+	70512726	70512726	8553170	1	282,	0,
#Partially deleted in new
chr18	70630533	70650744	chr18:70630533-70650744	3	-	70630533	70630533	8553170	3	156,179,135,	0,12011,20076,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	71000476	71011490	chr18:71000476-71011490	3	-	71000476	71000476	8553170	3	148,175,51,	0,1237,10963,
#Partially deleted in new
chr18	71028769	71033056	chr18:71028769-71033056	7	+	71028769	71028769	16724991	2	176,671,	0,3616,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	71216703	71237102	chr18:71216703-71237102	3	-	71216703	71216703	8553170	4	198,101,187,81,	0,6353,7427,20318,
#Partially deleted in new
chr18	71225703	71226721	chr18:71225703-71226721	7	+	71225703	71225703	16724991	1	1018,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	71519961	71578956	chr18:71519961-71578956	3	-	71519961	71519961	789624	7	1121,1268,191,194,83,98,150,	0,2027,7815,11661,14252,28637,58845,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	71520248	71578937	chr18:71520248-71578937	0	-	71520248	71520248	789624	5	834,1268,83,98,131,	0,1740,13965,28350,58558,
#Deleted in new
chr18	71588536	71588884	chr18:71588536-71588884	7	+	71588536	71588536	16724991	1	348,	0,
#Deleted in new
chr18	71665147	71665525	chr18:71665147-71665525	7	+	71665147	71665147	16724991	1	378,	0,
#Partially deleted in new
chr18	71732614	71782226	chr18:71732614-71782226	3	-	71732614	71732614	789624	5	233,139,34,132,37,	0,2059,2540,3808,49575,
#Deleted in new
chr18	71779555	71782281	chr18:71779555-71782281	1	-	71779555	71779555	8553170	2	245,92,	0,2634,
#Partially deleted in new
chr18	71782075	71788128	chr18:71782075-71788128	1	-	71782075	71782075	8553170	3	200,95,17,	0,4905,6036,
#Partially deleted in new
chr18	71837038	71870788	chr18:71837038-71870788	3	+	71837038	71837038	8553170	2	207,406,	0,33344,
#Partially deleted in new
chr18	71890408	71944577	chr18:71890408-71944577	3	-	71890408	71890408	8553170	3	47,141,99,	0,46857,54070,
#Deleted in new
chr18	71932492	71932796	chr18:71932492-71932796	7	+	71932492	71932492	16724991	1	304,	0,
#Deleted in new
chr18	72536679	72544539	chr18:72536679-72544539	3	-	72538175	72542160	789624	5	1694,120,523,45,563,	0,1973,5124,6806,7297,
#Deleted in new
chr18	72536679	72543554	chr18:72536679-72543554	1	-	72538175	72542160	789624	4	1694,120,523,69,	0,1973,5124,6806,
#Deleted in new
chr18	72536683	72540298	chr18:72536683-72540298	0	-	72536683	72536683	8553170	2	1690,1646,	0,1969,
#Deleted in new
chr18	72538019	72543554	chr18:72538019-72543554	1	-	72538175	72543494	789624	3	354,120,69,	0,633,5466,
#Deleted in new
chr18	72538110	72543229	chr18:72538110-72543229	0	-	72538110	72538110	8553170	3	263,120,248,	0,542,4871,
#Partially deleted in new
chr18	72538149	72638517	chr18:72538149-72638517	1	-	72538175	72638339	789624	3	224,120,193,	0,503,100175,
#Partially deleted in new
chr18	72544452	72638455	chr18:72544452-72638455	0	-	72544452	72544452	8553170	3	156,66,104,	0,8118,93899,
#Partially deleted in new
chr18	72618266	72619222	chr18:72618266-72619222	7	+	72618266	72618266	16724991	1	956,	0,
#Partially deleted in new
chr18	72742313	72867575	chr18:72742313-72867575	3	-	72749027	72867291	789624	11	457,75,559,114,229,128,42,249,138,54,312,	0,6700,7748,13720,41364,51803,52049,116512,122494,122874,124950,
#Deleted in new
chr18	72743755	72745961	chr18:72743755-72745961	3	-	72743755	72743755	8553170	1	2206,	0,
#Deleted in new
chr18	72747141	72749038	chr18:72747141-72749038	0	-	72749027	72749038	8553170	2	604,25,	0,1872,
#Partially deleted in new
chr18	72747380	72867949	chr18:72747380-72867949	1	-	72749027	72867291	789624	11	784,75,559,114,229,128,42,249,138,54,686,	0,1633,2681,8653,36297,46736,46982,111445,117427,117807,119883,
#Deleted in new
chr18	72751951	72752051	chr18:72751951-72752051	7	+	72751951	72751951	16724991	1	100,	0,
#Partially deleted in new
chr18	72783800	72867373	chr18:72783800-72867373	0	-	72783800	72783800	8553170	4	106,138,54,110,	0,81007,81387,83463,
#Partially deleted in new
chr18	72834038	72865699	chr18:72834038-72865699	1	-	72835314	72865597	789624	5	1281,249,138,54,127,	0,24787,30769,31149,31534,
#Partially deleted in new
chr18	72858979	72867031	chr18:72858979-72867031	0	-	72858979	72866759	789624	4	95,138,54,288,	0,5828,6208,7764,
#Deleted in new
chr18	72867701	72868146	chr18:72867701-72868146	0	-	72867701	72867701	8553170	2	280,27,	0,418,
#Partially deleted in new
chr18	72868387	72881399	chr18:72868387-72881399	0	+	72868387	72868387	789624	2	75,210,	0,12802,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr18	73151240	73264303	chr18:73151240-73264303	3	-	73151240	73151240	8553170	10	282,103,116,124,150,189,125,137,106,64,	0,2179,4579,8300,10583,18606,21597,49412,104572,112999,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	73154057	73264480	chr18:73154057-73264480	1	-	73154057	73154057	5263520	6	1878,124,150,137,106,241,	0,5483,7766,46595,101755,110182,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	73158821	73264454	chr18:73158821-73264454	1	-	73158821	73158821	8553170	4	3152,137,106,215,	0,41831,96991,105418,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	73200627	73264445	chr18:73200627-73264445	0	-	73200627	73200627	8553170	3	162,106,206,	0,55185,63612,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	73250292	73264474	chr18:73250292-73264474	0	-	73250292	73250292	8553170	3	403,106,235,	0,5520,13947,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	73255597	73264468	chr18:73255597-73264468	0	-	73255597	73255597	8553170	2	321,229,	0,8642,
#Deleted in new
chr18	73332271	73333842	chr18:73332271-73333842	0	+	73332271	73332271	8553170	2	310,469,	0,1102,
#Partially deleted in new
chr18	73711328	73715490	chr18:73711328-73715490	3	-	73711328	73711328	8553170	3	185,110,260,	0,1407,3902,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	73744934	73745232	chr18:73744934-73745232	3	+	73744934	73744934	8553170	1	298,	0,
#Partially deleted in new
chr18	73914404	74034161	chr18:73914404-74034161	3	-	73914404	73914404	8553170	3	269,103,121,	0,522,119636,
#Deleted in new
chr18	73921938	73922631	chr18:73921938-73922631	3	-	73921938	73921938	8553170	1	693,	0,
#Partially deleted in new
chr18	74073352	74147831	chr18:74073352-74147831	0	-	74147665	74147785	789624	10	378,125,143,83,127,210,243,105,111,291,	0,8574,50015,51136,52622,56052,57063,62409,66849,74188,
#Partially deleted in new
chr18	74073365	74147865	chr18:74073365-74147865	3	-	74073460	74147785	789624	10	365,125,143,83,127,210,243,105,111,196,	0,8561,50002,51123,52609,56039,57050,62396,66836,74304,
#Partially deleted in new
chr18	74073366	74147791	chr18:74073366-74147791	0	-	74147545	74147785	8553170	11	364,125,143,83,127,210,243,105,111,86,122,	0,8560,50001,51122,52608,56038,57049,62395,66835,74127,74303,
#Partially deleted in new
chr18	74073367	74147114	chr18:74073367-74147114	0	-	74147067	74147114	789624	10	363,125,143,83,127,210,243,105,111,80,	0,8559,50000,51121,52607,56037,57048,62394,66834,73667,
#Partially deleted in new
chr18	74073368	74082100	chr18:74073368-74082100	0	-	74073368	74073368	8553170	2	362,174,	0,8558,
#Partially deleted in new
chr18	74073443	74123510	chr18:74073443-74123510	0	-	74073629	74123510	789624	3	225,125,143,	0,8483,49924,
#Partially deleted in new
chr18	74073452	74135866	chr18:74073452-74135866	0	-	74130795	74135866	789624	6	278,125,143,83,93,105,	0,8474,49915,51036,57254,62309,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	74073503	74078684	chr18:74073503-74078684	0	-	74073503	74073503	8553170	3	227,337,181,	0,2690,5000,
#Deleted in new
chr18	74122591	74126101	chr18:74122591-74126101	0	-	74123353	74126101	789624	3	919,83,127,	0,1897,3383,
#Partially deleted in new
chr18	74129561	74147751	chr18:74129561-74147751	0	-	74140747	74147751	789624	6	53,243,105,111,50,211,	0,854,6200,10640,11162,17979,
#Partially deleted in new
chr18	74130469	74147843	chr18:74130469-74147843	0	-	74130469	74147785	789624	3	189,105,174,	0,5292,17200,
#Partially deleted in new
chr18	74130561	74147785	chr18:74130561-74147785	0	-	74147067	74147785	789624	6	97,105,111,50,85,116,	0,5200,9640,10162,16473,17108,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	74148510	74160530	chr18:74148510-74160530	3	+	74148808	74158480	789624	6	599,63,98,74,106,2155,	0,6634,6795,9503,9660,9865,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	74148522	74158012	chr18:74148522-74158012	1	+	74148808	74156293	789624	4	587,63,98,1776,	0,6622,6783,7714,
#Partially deleted in new
chr18	74148537	74158040	chr18:74148537-74158040	0	+	74148537	74148537	8553170	3	572,259,27,	0,6607,9476,
#Partially deleted in new
chr18	74148781	74155493	chr18:74148781-74155493	0	+	74148781	74148781	8553170	3	328,63,188,	0,6363,6524,
#Partially deleted in new
chr18	74155094	74158476	chr18:74155094-74158476	0	+	74155094	74155094	8553170	4	309,74,106,101,	0,2919,3076,3281,
#Partially deleted in new
chr18	74155174	74158786	chr18:74155174-74158786	0	+	74155174	74158348	789624	4	33,98,74,616,	0,131,2839,2996,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	74211390	74212569	chr18:74211390-74212569	1	-	74211390	74211390	8553170	1	1179,	0,
#Partially deleted in new
chr18	74211390	74240555	chr18:74211390-74240555	3	-	74211390	74211390	8553170	2	173,284,	0,28881,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	74227505	74227803	chr18:74227505-74227803	3	+	74227505	74227505	8553170	1	298,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	74250846	74292016	chr18:74250846-74292016	3	-	74253583	74291875	0	5	2819,35,30,129,270,	0,4894,10068,12502,40900,
#Partially deleted in new
chr18	74253294	74261681	chr18:74253294-74261681	0	-	74253294	74253294	8553170	3	371,35,767,	0,2446,7620,
#Partially deleted in new
chr18	74253295	74291041	chr18:74253295-74291041	1	-	74253583	74263384	789624	5	370,35,30,129,154,	0,2445,7619,10053,37592,
#Partially deleted in new
chr18	74253296	74291935	chr18:74253296-74291935	1	-	74256844	74291875	0	6	369,35,24,30,129,189,	0,2444,3533,7618,10052,38450,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	74253296	74291957	chr18:74253296-74291957	0	-	74253296	74253296	8553170	4	369,5204,129,211,	0,2444,10052,38450,
#Partially deleted in new
chr18	74253437	74291973	chr18:74253437-74291973	1	-	74253583	74291875	0	4	228,35,129,227,	0,2303,9911,38309,
#Partially deleted in new
chr18	74253553	74261177	chr18:74253553-74261177	0	-	74253553	74253553	8553170	4	112,35,30,128,	0,2187,7361,7496,
#Partially deleted in new
chr18	74315812	74359187	chr18:74315812-74359187	3	+	74317865	74354513	789624	14	297,166,79,57,112,42,77,110,97,86,184,1023,90,2707,	0,2021,4700,6885,12134,13182,15053,22902,26219,26428,27706,37433,38644,40668,
#Partially deleted in new
chr18	74389883	74390297	chr18:74389883-74390297	7	-	74389883	74389883	16724991	1	414,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	74409414	74410133	chr18:74409414-74410133	1	+	74409414	74409414	8553170	1	719,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	74409447	74413209	chr18:74409447-74413209	3	+	74409447	74409447	789624	2	84,1620,	0,2142,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	74434098	74457268	chr18:74434098-74457268	3	-	74436500	74457259	789624	4	2621,165,678,207,	0,7853,12507,22963,
#Partially deleted in new
chr18	74435727	74457944	chr18:74435727-74457944	1	-	74436500	74442095	789624	3	992,165,172,	0,6224,22045,
#Partially deleted in new
chr18	74495815	74508874	chr18:74495815-74508874	0	+	74499973	74508874	789624	5	108,97,144,163,35,	0,4121,5513,10033,13024,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr18	74496207	74523454	chr18:74496207-74523454	3	+	74499973	74520068	0	12	224,152,144,163,89,201,85,161,165,142,148,3456,	0,3674,5121,9641,12632,14605,16240,17351,20020,22291,22741,23791,
#Partially deleted in new
chr18	74496233	74512457	chr18:74496233-74512457	0	+	74496281	74512457	789624	5	198,163,89,201,10,	0,9615,12606,14579,16214,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr18	74496306	74521131	chr18:74496306-74521131	1	+	74499973	74520068	0	12	125,97,144,163,89,201,85,161,165,142,148,1133,	0,3630,5022,9542,12533,14506,16141,17252,19921,22192,22642,23692,
#Partially deleted in new
chr18	74496306	74506028	chr18:74496306-74506028	0	+	74496306	74496306	8553170	4	125,152,144,180,	0,3575,5022,9542,
#Partially deleted in new
chr18	74496316	74505942	chr18:74496316-74505942	0	+	74499973	74505942	789624	4	115,97,261,94,	0,3620,4895,9532,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	74496318	74508928	chr18:74496318-74508928	0	+	74499973	74501401	789624	6	113,97,137,144,163,89,	0,3618,4783,5010,9530,12521,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	74496358	74508843	chr18:74496358-74508843	0	+	74499973	74508843	789624	6	73,87,97,144,163,4,	0,1150,3578,4970,9490,12481,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	74496361	74498024	chr18:74496361-74498024	0	+	74496361	74496361	8553170	2	70,516,	0,1147,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	74496371	74505911	chr18:74496371-74505911	0	+	74499973	74505911	789624	5	60,218,97,144,63,	0,1137,3565,4957,9477,
#Partially deleted in new
chr18	74496373	74512457	chr18:74496373-74512457	0	+	74499973	74512457	789624	5	58,97,144,201,10,	0,3563,4955,14439,16074,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	74496382	74506011	chr18:74496382-74506011	0	+	74499973	74506011	789624	5	49,87,152,144,163,	0,1126,3499,4946,9466,
#Partially deleted in new
chr18	74499341	74508920	chr18:74499341-74508920	0	+	74499973	74508920	789624	5	34,152,144,163,81,	0,540,1987,6507,9498,
#Partially deleted in new
chr18	74499357	74501433	chr18:74499357-74501433	0	+	74499973	74501433	789624	3	349,97,105,	0,579,1971,
#Partially deleted in new
chr18	74499420	74508857	chr18:74499420-74508857	0	+	74499973	74508857	789624	5	62,152,144,163,18,	0,461,1908,6428,9419,
#Partially deleted in new
chr18	74499587	74513565	chr18:74499587-74513565	0	+	74499973	74513565	789624	7	446,144,163,89,201,85,7,	0,1741,6261,9252,11225,12860,13971,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr18	74499860	74521128	chr18:74499860-74521128	1	+	74499973	74520068	0	9	173,144,201,85,161,165,142,148,1130,	0,1468,10952,12587,13698,16367,18638,19088,20138,
#Partially deleted in new
chr18	74499928	74513586	chr18:74499928-74513586	0	+	74499928	74499928	8553170	5	105,144,163,85,28,	0,1400,5920,12519,13630,
#Partially deleted in new
chr18	74499940	74509336	chr18:74499940-74509336	1	+	74499973	74508946	789624	4	93,144,163,497,	0,1388,5908,8899,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	74501089	74508865	chr18:74501089-74508865	0	+	74501397	74508865	789624	3	383,163,26,	0,4759,7750,
#Partially deleted in new
chr18	74501385	74509335	chr18:74501385-74509335	0	+	74501385	74509174	789624	4	87,163,89,197,	0,4463,7454,7753,
#Deleted in new
chr18	74504765	74505248	chr18:74504765-74505248	3	+	74504765	74504765	8553170	1	483,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	74507066	74509632	chr18:74507066-74509632	0	+	74507066	74507066	8553170	1	2566,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	74508844	74521121	chr18:74508844-74521121	0	+	74508844	74508844	8553170	6	84,201,85,161,2869,1123,	0,1968,3603,4714,7383,11154,
#Partially deleted in new
chr18	74510823	74513818	chr18:74510823-74513818	0	+	74510823	74510823	8553170	3	190,85,260,	0,1624,2735,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	74510875	74521104	chr18:74510875-74521104	0	+	74510875	74520258	789624	3	138,85,953,	0,1572,9276,
#Partially deleted in new
chr18	74510986	74513697	chr18:74510986-74513697	0	+	74510986	74510986	8553170	3	247,85,139,	0,1461,2572,
#Partially deleted in new
chr18	74512012	74518558	chr18:74512012-74518558	0	+	74512012	74512012	8553170	5	88,85,161,165,60,	0,435,1546,4215,6486,
#Deleted in new
chr18	74513576	74516584	chr18:74513576-74516584	0	+	74513576	74513576	8553170	2	143,357,	0,2651,
#Partially deleted in new
chr18	74516330	74518858	chr18:74516330-74518858	0	+	74516330	74516330	8553170	2	62,360,	0,2168,
#Partially deleted in new
chr18	74534439	74585025	chr18:74534439-74585025	3	+	74534667	74584562	789624	12	252,129,150,163,89,201,85,161,165,142,148,530,	0,21898,24883,26416,27607,32793,36746,42429,43723,45690,49121,50056,
#Partially deleted in new
chr18	74534502	74567321	chr18:74534502-74567321	0	+	74534502	74534502	8553170	5	189,129,150,89,89,	0,21835,24820,27544,32730,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr18	74534601	74587212	chr18:74534601-74587212	1	+	74534667	74584562	789624	11	90,150,163,89,201,85,161,165,142,148,2717,	0,24721,26254,27445,32631,36584,42267,43561,45528,48959,49894,
#Partially deleted in new
chr18	74560962	74576735	chr18:74560962-74576735	0	+	74560962	74562112	789624	5	49,89,201,85,127,	0,1084,6270,10223,15646,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	74561380	74562100	chr18:74561380-74562100	3	-	74561380	74561380	8553170	2	227,104,	0,616,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr18	74567153	74585025	chr18:74567153-74585025	0	+	74567153	74567153	8553170	7	280,85,161,165,142,148,530,	0,4032,9715,11009,12976,16407,17342,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	74574763	74576577	chr18:74574763-74576577	0	+	74574763	74574763	8553170	2	53,432,	0,1382,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	74576279	74585011	chr18:74576279-74585011	0	+	74576279	74576279	8553170	3	2048,142,1451,	0,3850,7281,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	74591773	74597824	chr18:74591773-74597824	3	-	74591773	74591773	789624	2	2066,1397,	0,4654,
#Partially deleted in new
chr18	74593148	74597800	chr18:74593148-74597800	0	-	74593148	74593148	8553170	2	691,65,	0,4587,
#Partially deleted in new
chr18	74593200	74597569	chr18:74593200-74597569	0	-	74593200	74593200	8553170	2	639,312,	0,4057,
#Partially deleted in new
chr18	74593695	74598508	chr18:74593695-74598508	0	-	74593695	74593695	8553170	2	144,279,	0,4534,
#Partially deleted in new
chr18	74597869	74804627	chr18:74597869-74804627	1	+	74631019	74804069	789624	5	68,4740,115,75,664,	0,33097,43138,183558,206094,
#Partially deleted in new
chr18	74630962	74804624	chr18:74630962-74804624	1	+	74631019	74804069	789624	4	4744,115,75,661,	0,10045,150465,173001,
#Partially deleted in new
chr18	74631019	75065669	chr18:74631019-75065669	3	+	74631019	75064468	789624	8	4687,115,75,167,84,121,179,2520,	0,9988,150408,246177,250016,258898,289494,432130,
#Partially deleted in new
chr18	74631019	74921058	chr18:74631019-74921058	1	+	74631019	74920712	789624	7	4687,115,75,167,84,121,545,	0,9988,150408,246177,250016,258898,289494,
#Partially deleted in new
chr18	74877197	74905938	chr18:74877197-74905938	0	+	74877197	74905315	789624	4	166,84,121,642,	0,3838,12720,28099,
#Partially deleted in new
chr18	74877204	74898443	chr18:74877204-74898443	0	+	74877204	74898063	789624	4	159,84,121,429,	0,3831,12713,20810,
#Partially deleted in new
chr18	75060154	75063485	chr18:75060154-75063485	0	+	75060154	75060154	8553170	2	146,336,	0,2995,
#Deleted in new
chr18	75061281	75065671	chr18:75061281-75065671	0	+	75061281	75061281	8553170	1	4390,	0,
#Deleted in new
chr18	75070196	75071091	chr18:75070196-75071091	3	-	75070196	75070196	8553170	3	210,188,157,	0,286,738,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	75073542	75074205	chr18:75073542-75074205	3	+	75073542	75073542	8553170	1	663,	0,
#Deleted in new
chr18	75086367	75086514	chr18:75086367-75086514	3	+	75086367	75086367	8553170	1	147,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	75103586	75106260	chr18:75103586-75106260	3	-	75103586	75103586	8553170	1	2674,	0,
#Partially deleted in new
chr18	75112136	75125565	chr18:75112136-75125565	3	-	75112136	75112136	8553170	2	577,202,	0,13227,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	75195107	75209348	chr18:75195107-75209348	3	-	75201415	75209058	0	2	7233,499,	0,13742,
#Deleted in new
chr18	75199456	75205513	chr18:75199456-75205513	1	-	75201415	75202180	0	2	2884,321,	0,5736,
#Deleted in new
chr18	75201716	75208466	chr18:75201716-75208466	0	-	75201716	75202180	789624	2	624,47,	0,6703,
#Deleted in new
chr18	75201877	75208417	chr18:75201877-75208417	0	-	75201877	75202180	789624	2	463,57,	0,6483,
#Partially deleted in new
chr18	75210754	75289950	chr18:75210754-75289950	3	+	75285542	75288641	789624	2	489,4503,	0,74693,
#Partially deleted in new
chr18	75211528	75289950	chr18:75211528-75289950	1	+	75211876	75288641	789624	2	388,4503,	0,73919,
#Partially deleted in new
chr18	75221057	75286372	chr18:75221057-75286372	0	+	75285542	75286372	789624	2	97,925,	0,64390,
#Partially deleted in new
chr18	75244575	75285778	chr18:75244575-75285778	0	+	75285542	75285778	789624	3	47,173,331,	0,652,40872,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	75282863	75289943	chr18:75282863-75289943	0	+	75282863	75282863	8553170	1	7080,	0,
#Deleted in new
chr18	75387055	75387596	chr18:75387055-75387596	3	+	75387055	75387055	8553170	1	541,	0,
#Partially deleted in new
chr18	75407011	75419014	chr18:75407011-75419014	1	+	75407011	75407011	8553170	4	81,169,87,199,	0,893,10995,11804,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	75407944	75426607	chr18:75407944-75426607	3	+	75407944	75407944	8553170	3	129,87,1791,	0,10062,16872,
#Partially deleted in new
chr18	75408037	75419040	chr18:75408037-75419040	1	+	75408037	75408037	8553170	5	36,59,94,87,225,	0,2023,4443,9969,10778,
#Partially deleted in new
chr18	75409475	75427703	chr18:75409475-75427703	3	-	75410863	75427563	789624	3	1434,131,269,	0,9310,17959,
#Partially deleted in new
chr18	75409871	75427634	chr18:75409871-75427634	1	-	75410804	75427563	789624	2	1038,200,	0,17563,
#Partially deleted in new
chr18	75416017	75427682	chr18:75416017-75427682	1	-	75418188	75427563	789624	3	2175,131,248,	0,2768,11417,
#Partially deleted in new
chr18	75432702	75436957	chr18:75432702-75436957	3	-	75432702	75432702	8553170	2	654,94,	0,4161,
#Partially deleted in new
chr18	75696078	75712385	chr18:75696078-75712385	3	-	75696078	75696078	789624	2	1533,370,	0,15937,
#Partially deleted in new
chr18	75844924	75868252	chr18:75844924-75868252	3	-	75844924	75844924	8553170	2	213,384,	0,22944,
#Deleted in new
chr18	75927835	75928004	chr18:75927835-75928004	7	+	75927835	75927835	16724991	1	169,	0,
#Partially deleted in new
chr18	76008117	76015861	chr18:76008117-76015861	3	-	76008117	76008117	8553170	2	151,60,	0,7684,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	76122997	76145255	chr18:76122997-76145255	3	+	76122997	76122997	789624	6	702,60,1304,141,88,499,	0,946,2713,9936,21496,21759,
#Deleted in new
chr18	76123424	76124145	chr18:76123424-76124145	0	+	76123424	76123424	8553170	2	275,202,	0,519,
#Partially deleted in new
chr18	76173303	76177738	chr18:76173303-76177738	3	-	76173303	76173303	8553170	2	324,140,	0,4295,
#Partially deleted in new
chr18	76209509	76215702	chr18:76209509-76215702	3	+	76209509	76209509	8553170	4	23,135,201,120,	0,234,4746,6073,
#Deleted in new
chr18	76227989	76233387	chr18:76227989-76233387	3	-	76227989	76227989	8553170	3	66,101,427,	0,913,4971,
#Partially deleted in new
chr18	76247724	76251388	chr18:76247724-76251388	3	+	76247724	76247724	8553170	2	120,271,	0,3393,
#Deleted in new
chr18	76254291	76255214	chr18:76254291-76255214	3	-	76254291	76254291	8553170	2	143,455,	0,468,
#Deleted in new
chr18	76256890	76258337	chr18:76256890-76258337	3	+	76256890	76256890	8553170	2	43,879,	0,568,
#Deleted in new
chr18	76259165	76260114	chr18:76259165-76260114	3	+	76259165	76259165	8553170	2	164,298,	0,651,
#Partially deleted in new
chr18	76358189	76495190	chr18:76358189-76495190	3	-	76362497	76443054	789624	7	4368,68,105,1449,1967,114,47,	0,12338,13277,20665,83055,104838,136954,
#Deleted in new
chr18	76358196	76359565	chr18:76358196-76359565	0	-	76358196	76358196	8553170	2	412,270,	0,1099,
#Partially deleted in new
chr18	76361767	76380285	chr18:76361767-76380285	0	-	76362540	76380285	789624	3	790,105,1431,	0,9699,17087,
#Partially deleted in new
chr18	76362270	76378913	chr18:76362270-76378913	0	-	76362540	76378913	789624	2	287,59,	0,16584,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	76372716	76378275	chr18:76372716-76378275	3	+	76372716	76372716	8553170	2	195,203,	0,5356,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	76385641	76389406	chr18:76385641-76389406	3	-	76385641	76385641	8553170	1	3765,	0,
#Partially deleted in new
chr18	76442828	76490779	chr18:76442828-76490779	0	-	76442828	76443054	789624	2	383,99,	0,47852,
#Deleted in new
chr18	76491651	76493918	chr18:76491651-76493918	3	+	76491651	76491651	789624	2	38,1162,	0,1105,
#Deleted in new
chr18	76492563	76492889	chr18:76492563-76492889	0	+	76492563	76492563	8553170	1	326,	0,
#Deleted in new
chr18	76495520	76498088	chr18:76495520-76498088	3	+	76495520	76495520	8553170	2	266,1810,	0,758,
#Partially deleted in new
chr18	76528654	76558220	chr18:76528654-76558220	0	+	76528654	76528654	8553170	2	309,246,	0,29320,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	76528654	76559826	chr18:76528654-76559826	3	+	76528654	76528654	789624	3	309,81,1852,	0,1729,29320,
#Partially deleted in new
chr18	76528719	76610968	chr18:76528719-76610968	0	+	76528719	76528719	8553170	3	244,81,124,	0,1664,82125,
#Partially deleted in new
chr18	76528823	76602885	chr18:76528823-76602885	0	+	76528823	76528823	8553170	3	140,81,148,	0,1560,73914,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	76528916	76562213	chr18:76528916-76562213	0	+	76528916	76528916	8553170	3	47,81,351,	0,1467,32946,
#Partially deleted in new
chr18	76543586	76558592	chr18:76543586-76558592	0	+	76543586	76543586	8553170	2	171,618,	0,14388,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	76615211	76625940	chr18:76615211-76625940	3	+	76615211	76615211	8553170	2	326,3184,	0,7545,
#Partially deleted in new
chr18	76619776	76623559	chr18:76619776-76623559	1	+	76619776	76619776	789624	2	1418,803,	0,2980,
#Partially deleted in new
chr18	76623005	76639011	chr18:76623005-76639011	3	-	76623005	76623005	789624	5	191,85,69,140,227,	0,11876,15202,15543,15779,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	76690028	76693636	chr18:76690028-76693636	3	+	76690028	76690028	789624	2	1945,393,	0,3215,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	76690088	76691543	chr18:76690088-76691543	0	+	76690088	76690088	8553170	1	1455,	0,
#Partially deleted in new
chr18	76703443	76704254	chr18:76703443-76704254	7	-	76703443	76703443	16724991	2	85,393,	0,418,
#Deleted in new
chr18	76751304	76751841	chr18:76751304-76751841	7	+	76751304	76751304	16724991	1	537,	0,
#Deleted in new
chr18	76759684	76759866	chr18:76759684-76759866	7	-	76759684	76759684	16724991	1	182,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	76794731	76822295	chr18:76794731-76822295	3	-	76794731	76794731	789624	3	927,88,280,	0,22023,27284,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	76800663	76800774	chr18:76800663-76800774	3	-	76800663	76800663	8553170	1	111,	0,
#Partially deleted in new
chr18	76805150	76805736	chr18:76805150-76805736	3	-	76805150	76805150	8553170	1	586,	0,
#Partially deleted in new
chr18	76822606	76969918	chr18:76822606-76969918	1	+	76822607	76968339	789624	31	56,143,165,179,125,173,144,204,229,273,204,142,261,254,102,152,104,152,213,283,104,366,146,241,180,188,132,198,130,177,1704,	0,26919,29168,46078,49094,52885,55402,57506,58677,72406,76412,81773,82548,85713,87461,88053,89637,91140,93040,97169,100464,102582,104430,104670,105320,114549,124914,133378,137080,138072,145608,
#Partially deleted in new
chr18	76824159	76970727	chr18:76824159-76970727	3	+	76824357	76968339	789624	31	247,143,165,179,125,173,144,204,229,273,204,142,261,254,102,152,104,152,213,283,104,366,146,241,180,188,132,198,130,177,2513,	0,25366,27615,44525,47541,51332,53849,55953,57124,70853,74859,80220,80995,84160,85908,86500,88084,89587,91487,95616,98911,101029,102877,103117,103767,112996,123361,131825,135527,136519,144055,
#Partially deleted in new
chr18	76824159	76970727	chr18:76824159-76970727	0	+	76824357	76937162	789624	32	247,143,165,179,125,173,144,204,229,273,204,142,261,254,102,152,104,152,213,283,104,366,146,241,180,82,188,132,198,130,177,2513,	0,25366,27615,44525,47541,51332,53849,55953,57124,70853,74859,80220,80995,84160,85908,86500,88084,89587,91487,95616,98911,101029,102877,103117,103767,111820,112996,123361,131825,135527,136519,144055,
#Deleted in new
chr18	76834428	76834888	chr18:76834428-76834888	7	-	76834428	76834428	16724991	1	460,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	76840837	76841102	chr18:76840837-76841102	3	-	76840837	76840837	8553170	1	265,	0,
#Partially deleted in new
chr18	76849198	76881482	chr18:76849198-76881482	0	+	76849476	76881482	789624	8	470,165,179,125,173,144,204,199,	0,2576,19486,22502,26293,28810,30914,32085,
#Partially deleted in new
chr18	76851772	76875516	chr18:76851772-76875516	0	+	76851772	76851772	8553170	3	167,179,25,	0,16912,23719,
#Partially deleted in new
chr18	76880281	76895377	chr18:76880281-76895377	0	+	76880281	76880281	8553170	3	35,229,365,	0,1002,14731,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	76884934	76888724	chr18:76884934-76888724	7	-	76884934	76884934	16724991	4	2154,155,87,351,	0,2475,3000,3439,
#Deleted in new
chr18	76898091	76899123	chr18:76898091-76899123	0	+	76898091	76898091	8553170	2	81,105,	0,927,
#Partially deleted in new
chr18	76927926	76937343	chr18:76927926-76937343	0	+	76927926	76937343	789624	3	180,162,188,	0,3140,9229,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	76974689	76977265	chr18:76974689-76977265	1	+	76974689	76974689	8553170	2	364,204,	0,2372,
#Partially deleted in new
chr18	76976941	76978861	chr18:76976941-76978861	0	+	76976941	76976941	8553170	2	245,195,	0,1725,
#Partially deleted in new
chr18	76978826	77017095	chr18:76978826-77017095	1	-	76980426	77017008	0	7	1645,120,33,36,105,78,264,	0,5948,9668,10050,11129,31022,38005,
#Deleted in new
chr18	76978832	76979553	chr18:76978832-76979553	0	+	76978832	76978832	8553170	2	365,198,	0,523,
#Partially deleted in new
chr18	76978833	77132818	chr18:76978833-77132818	1	-	76980426	77105261	0	9	1638,120,33,36,105,437,88,76,239,	0,5941,9661,10043,11122,37998,87464,126377,153746,
#Partially deleted in new
chr18	76978833	76987956	chr18:76978833-76987956	0	-	76978833	76978833	8553170	2	1638,3182,	0,5941,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	76978834	76990023	chr18:76978834-76990023	0	-	76988089	76990023	789624	3	9693,36,68,	0,10042,11121,
#Partially deleted in new
chr18	76978851	77017062	chr18:76978851-77017062	3	-	76980426	77017008	0	6	1620,120,33,36,105,231,	0,5923,9643,10025,11104,37980,
#Partially deleted in new
chr18	76978851	77017055	chr18:76978851-77017055	1	-	76980426	77017008	789624	6	1620,120,33,66,105,224,	0,5923,9643,10025,11104,37980,
#Partially deleted in new
chr18	76978860	77017086	chr18:76978860-77017086	1	-	76980426	77017008	0	5	1611,120,36,105,255,	0,5914,10016,11095,37971,
#Deleted in new
chr18	76978965	76983753	chr18:76978965-76983753	3	+	76978965	76978965	8553170	3	232,137,27,	0,3212,4761,
#Partially deleted in new
chr18	76979740	77017065	chr18:76979740-77017065	1	-	76979938	77017008	789624	3	298,50,234,	0,10270,37091,
#Partially deleted in new
chr18	76979766	77017042	chr18:76979766-77017042	1	-	76980426	77017008	0	6	705,120,36,105,78,211,	0,5008,9110,10189,30082,37065,
#Partially deleted in new
chr18	76980063	77017062	chr18:76980063-77017062	1	-	76980386	77017008	789624	3	408,27,149,	0,4711,36850,
#Partially deleted in new
chr18	76980234	77017000	chr18:76980234-77017000	0	-	76988508	77017000	789624	4	237,120,26,169,	0,4540,8260,36597,
#Partially deleted in new
chr18	76980274	77017058	chr18:76980274-77017058	0	-	76989986	77017008	789624	6	197,120,33,36,35,145,	0,4500,8220,8602,9681,36639,
#Partially deleted in new
chr18	76980291	76985487	chr18:76980291-76985487	0	-	76980291	76980291	8553170	3	180,120,284,	0,4483,4912,
#Partially deleted in new
chr18	76980300	77017055	chr18:76980300-77017055	1	-	76980426	77017008	789624	6	171,120,228,36,105,224,	0,4474,7999,8576,9655,36531,
#Partially deleted in new
chr18	76980326	77017261	chr18:76980326-77017261	1	-	76980426	77017008	789624	2	145,430,	0,36505,
#Partially deleted in new
chr18	76980336	77017065	chr18:76980336-77017065	0	-	76989975	77017008	789624	6	135,120,33,36,105,152,	0,4438,8158,8540,9619,36577,
#Partially deleted in new
chr18	76980344	77017055	chr18:76980344-77017055	0	-	76989975	77017008	789624	7	127,120,7,33,36,105,142,	0,4430,4859,8150,8532,9611,36569,
#Partially deleted in new
chr18	76980350	77017065	chr18:76980350-77017065	0	-	76989975	77017008	789624	7	121,120,33,36,105,15,152,	0,4424,8144,8526,9605,36481,36563,
#Partially deleted in new
chr18	76980352	77017065	chr18:76980352-77017065	1	-	76980426	77017008	789624	7	119,120,33,36,105,82,86,	0,4422,8142,8524,9603,36479,36627,
#Partially deleted in new
chr18	76980426	77132844	chr18:76980426-77132844	1	-	76980426	77105261	789624	7	45,36,105,437,88,76,265,	0,8450,9529,36405,85871,124784,152153,
#Partially deleted in new
chr18	76980426	77105261	chr18:76980426-77105261	1	-	76980426	77105261	0	8	45,120,33,36,105,437,88,51,	0,4348,8068,8450,9529,36405,85871,124784,
#Partially deleted in new
chr18	76980454	77017055	chr18:76980454-77017055	1	-	76982620	77017008	789624	7	17,43,120,33,36,105,224,	0,2126,4320,8040,8422,9501,36377,
#Deleted in new
chr18	76981315	76984162	chr18:76981315-76984162	1	+	76981315	76981315	8553170	3	169,132,436,	0,867,2411,
#Deleted in new
chr18	76981711	76984082	chr18:76981711-76984082	1	+	76981711	76981711	8553170	3	278,178,356,	0,425,2015,
#Partially deleted in new
chr18	76984727	77017055	chr18:76984727-77017055	0	-	76984727	76984727	8553170	5	167,33,36,105,224,	0,3767,4149,5228,32104,
#Partially deleted in new
chr18	76984773	77010122	chr18:76984773-77010122	0	-	76984773	77009857	789624	5	121,33,36,105,274,	0,3721,4103,5182,25075,
#Partially deleted in new
chr18	76984794	77087582	chr18:76984794-77087582	0	-	76984794	76984794	8553170	5	100,36,105,88,237,	0,4082,5161,81503,102551,
#Partially deleted in new
chr18	76984794	77017055	chr18:76984794-77017055	0	-	76984794	76984794	8553170	7	100,7,33,36,105,78,224,	0,409,3700,4082,5161,25054,32037,
#Partially deleted in new
chr18	76984803	77017051	chr18:76984803-77017051	0	-	76984803	76984803	8553170	7	91,7,78,33,36,105,220,	0,400,2102,3691,4073,5152,32028,
#Partially deleted in new
chr18	76984807	77017055	chr18:76984807-77017055	0	-	76988970	77017008	789624	5	87,33,109,105,224,	0,3687,4069,5148,32024,
#Partially deleted in new
chr18	76984812	77017055	chr18:76984812-77017055	0	-	76990890	77017008	789624	6	82,33,36,105,88,224,	0,3682,4064,5143,6014,32019,
#Partially deleted in new
chr18	76984853	77017055	chr18:76984853-77017055	0	-	76989008	77017008	789624	5	41,33,177,105,224,	0,3641,4023,5102,31978,
#Partially deleted in new
chr18	76985249	77017055	chr18:76985249-77017055	0	-	76985249	76985249	8553170	5	182,33,36,105,224,	0,3245,3627,4706,31582,
#Partially deleted in new
chr18	76987589	77017042	chr18:76987589-77017042	0	-	76987589	76987589	8553170	4	938,36,105,211,	0,1287,2366,29242,
#Partially deleted in new
chr18	76988320	77009900	chr18:76988320-77009900	0	-	76988320	76988320	8553170	4	207,36,105,52,	0,556,1635,21528,
#Partially deleted in new
chr18	76988409	77017055	chr18:76988409-77017055	0	-	76988409	77017008	789624	5	118,36,105,78,224,	0,467,1546,21439,28422,
#Partially deleted in new
chr18	76988475	77017058	chr18:76988475-77017058	0	-	76988475	76988475	8553170	3	437,105,227,	0,1480,28356,
#Partially deleted in new
chr18	76988493	77017061	chr18:76988493-77017061	0	-	76988998	77017008	789624	4	34,200,105,230,	0,383,1462,28338,
#Partially deleted in new
chr18	76989725	77017055	chr18:76989725-77017055	0	-	76989725	76989725	8553170	2	335,224,	0,27106,
#Partially deleted in new
chr18	76989978	77017778	chr18:76989978-77017778	0	-	76989978	77017008	789624	3	82,437,356,	0,26853,27444,
#Deleted in new
chr18	77002848	77006846	chr18:77002848-77006846	3	-	77002848	77002848	8553170	1	3998,	0,
#Deleted in new
chr18	77005883	77017055	chr18:77005883-77017055	0	-	77005883	77005883	8553170	2	359,224,	0,10948,
#Partially deleted in new
chr18	77012778	77132769	chr18:77012778-77132769	1	-	77016813	77105261	0	4	4490,88,76,190,	0,53519,92432,119801,
#Partially deleted in new
chr18	77012778	77131684	chr18:77012778-77131684	1	-	77016813	77105261	0	4	4490,88,76,146,	0,53519,92432,118760,
#Partially deleted in new
chr18	77016978	77132814	chr18:77016978-77132814	0	-	77016978	77016978	8553170	5	290,88,224,76,235,	0,49319,80272,88232,115601,
#Partially deleted in new
chr18	77017069	77133683	chr18:77017069-77133683	0	-	77017069	77017069	8553170	4	199,88,76,168,	0,49228,88141,116446,
#Partially deleted in new
chr18	77017084	77087651	chr18:77017084-77087651	0	-	77017084	77017084	8553170	3	184,88,306,	0,49213,70261,
#Partially deleted in new
chr18	77017118	77133683	chr18:77017118-77133683	0	-	77017118	77017118	8553170	6	150,88,183,224,76,168,	0,49179,78249,80132,88092,116397,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	77065773	77087609	chr18:77065773-77087609	0	-	77065773	77065773	8553170	2	612,264,	0,21572,
#Deleted in new
chr18	77093085	77093446	chr18:77093085-77093446	3	+	77093085	77093085	8553170	1	361,	0,
#Deleted in new
chr18	77108283	77110537	chr18:77108283-77110537	3	-	77108283	77108283	8553170	1	2254,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	77112601	77114431	chr18:77112601-77114431	1	+	77112601	77112601	8553170	2	193,635,	0,1195,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	77112639	77115726	chr18:77112639-77115726	3	+	77112639	77112639	8553170	1	3087,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	77180105	77235430	chr18:77180105-77235430	3	+	77180105	77180105	8553170	5	95,114,121,173,57,	0,5078,25333,54115,55268,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	77250548	77277896	chr18:77250548-77277896	3	+	77250548	77268902	789624	3	666,66,9312,	0,5609,18036,
#Deleted in new
chr18	77253739	77256217	chr18:77253739-77256217	0	+	77253739	77253739	8553170	2	255,60,	0,2418,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	77421618	77560763	chr18:77421618-77560763	3	+	77421618	77421618	8553170	3	406,91,65,	0,101213,139080,
#Deleted in new
chr18	77431562	77431689	chr18:77431562-77431689	3	-	77431562	77431562	8553170	1	127,	0,
#Deleted in new
chr18	77435252	77437242	chr18:77435252-77437242	7	-	77435252	77435252	16724991	1	1990,	0,
#Partially deleted in new
chr18	77622551	77624515	chr18:77622551-77624515	3	+	77622551	77622551	8553170	2	542,119,	0,1845,
#Deleted in new
chr18	77632927	77633360	chr18:77632927-77633360	7	-	77632927	77632927	16724991	2	193,82,	0,351,
#Deleted in new
chr18	77863463	77863567	chr18:77863463-77863567	7	-	77863463	77863463	16724991	1	104,	0,
#Deleted in new
chr18	77971293	77972542	chr18:77971293-77972542	0	-	77971293	77971293	8553170	1	1249,	0,
#Partially deleted in new
chr18	77971503	77982839	chr18:77971503-77982839	3	-	77971503	77971503	8553170	3	1010,135,320,	0,7991,11016,
#Deleted in new
chr18	77983019	77986610	chr18:77983019-77986610	3	-	77983019	77983019	8553170	2	734,54,	0,3537,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	77986873	77993698	chr18:77986873-77993698	1	-	77986873	77986873	8553170	4	124,96,82,64,	0,2945,3219,6761,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	78036738	78036845	chr18:78036738-78036845	3	+	78036738	78036738	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	78137222	78140887	chr18:78137222-78140887	3	+	78137222	78137222	8553170	2	114,2613,	0,1052,
#Partially deleted in new
chr18	78480548	78484867	chr18:78480548-78484867	3	+	78480548	78480548	8553170	3	172,211,190,	0,2120,4129,
#Deleted in new
chr18	78505164	78506410	chr18:78505164-78506410	3	+	78505164	78505164	8553170	2	336,61,	0,1185,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	78544094	78544188	chr18:78544094-78544188	3	-	78544094	78544094	8553170	1	94,	0,
#Deleted in new
chr18	78795611	78796672	chr18:78795611-78796672	3	-	78795611	78795611	8553170	2	206,193,	0,868,
#Partially deleted in new
chr18	78908628	78918993	chr18:78908628-78918993	3	-	78908628	78908628	8553170	2	122,57,	0,10308,
#Partially deleted in new
chr18	78925063	78927441	chr18:78925063-78927441	3	-	78925063	78925063	8553170	2	165,358,	0,2020,
#Deleted in new
chr18	78976554	78978843	chr18:78976554-78978843	3	-	78976554	78976554	8553170	2	875,381,	0,1908,
#Deleted in new
chr18	78977094	78978843	chr18:78977094-78978843	0	-	78977094	78977094	8553170	2	335,58,	0,1691,
#Deleted in new
chr18	78977287	78977883	chr18:78977287-78977883	0	-	78977287	78977287	8553170	2	142,329,	0,267,
#Deleted in new
chr18	78978350	78979074	chr18:78978350-78979074	0	-	78978350	78978350	8553170	2	388,35,	0,689,
#Deleted in new
chr18	78980274	78999974	chr18:78980274-78999974	3	+	78980274	78997322	789624	3	82,3389,3084,	0,11799,16616,
#Deleted in new
chr18	78980274	78997631	chr18:78980274-78997631	1	+	78980274	78997322	789624	4	82,2832,341,741,	0,11799,14847,16616,
#Deleted in new
chr18	78980274	78997397	chr18:78980274-78997397	1	+	78980274	78997322	789624	5	82,179,1849,341,507,	0,11799,12782,14847,16616,
#Deleted in new
chr18	78985009	78992162	chr18:78985009-78992162	0	+	78985009	78985009	8553170	2	61,89,	0,7064,
#Deleted in new
chr18	78991681	78997322	chr18:78991681-78997322	1	+	78992390	78997322	789624	3	3224,341,432,	0,3440,5209,
#Deleted in new
chr18	78994797	79002677	chr18:78994797-79002677	0	+	78994797	79002291	789624	3	108,341,389,	0,324,7491,
#Partially deleted in new
chr18	79069284	79096481	chr18:79069284-79096481	0	+	79069410	79096481	789624	3	245,176,6,	0,8697,27191,
#Partially deleted in new
chr18	79069391	79255271	chr18:79069391-79255271	0	+	79069410	79206947	789624	10	138,174,151,114,109,59,52,81,76,1891,	0,27084,40963,43849,56875,74410,85112,123791,137545,183989,
#Partially deleted in new
chr18	79069393	79378283	chr18:79069393-79378283	3	+	79069410	79377383	789624	30	136,174,151,114,109,59,52,95,81,76,77,161,143,113,249,162,93,84,171,99,90,145,65,156,65,109,58,204,33,1037,	0,27082,40961,43847,56873,74408,85110,107419,123789,137543,144568,183987,207660,234210,237592,259747,260618,267234,267885,272874,274871,276034,276381,278376,278738,289960,303431,304504,306000,307853,
#Partially deleted in new
chr18	79069396	79378287	chr18:79069396-79378287	1	+	79069410	79377383	789624	29	133,174,151,114,109,59,52,95,81,76,77,161,143,113,249,162,93,84,171,99,90,145,65,156,65,109,58,204,1041,	0,27079,40958,43844,56870,74405,85107,107416,123786,137540,144565,183984,207657,234207,237589,259744,260615,267231,267882,272871,274868,276031,276378,278373,278735,289957,303428,304501,307850,
#Partially deleted in new
chr18	79069405	79154529	chr18:79069405-79154529	0	+	79069410	79154529	789624	6	124,151,114,109,59,26,	0,40949,43835,56861,74396,85098,
#Partially deleted in new
chr18	79069481	79143859	chr18:79069481-79143859	0	+	79069481	79069481	8553170	5	48,176,174,109,58,	0,8500,26994,56785,74320,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	79085133	79086435	chr18:79085133-79086435	3	+	79085133	79085133	8553170	1	1302,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr18	79087306	79277268	chr18:79087306-79277268	0	+	79087306	79087306	8553170	14	372,174,151,114,109,59,52,81,107,76,175,77,161,215,	0,9169,23048,25934,38960,56495,67197,105876,107079,119630,122241,126655,166074,189747,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	79087314	79096535	chr18:79087314-79096535	0	+	79087314	79087314	8553170	3	364,130,60,	0,8318,9161,
#Partially deleted in new
chr18	79096512	79378141	chr18:79096512-79378141	1	+	79096512	79378050	789624	13	137,151,114,109,59,52,95,81,76,77,161,143,252,	0,13842,16728,29754,47289,57991,80300,96670,110424,117449,156868,180541,281377,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr18	79113309	79364284	chr18:79113309-79364284	0	+	79113309	79113309	8553170	24	45,109,59,52,32,95,81,76,77,161,143,113,249,162,93,84,171,99,90,145,65,156,65,4931,	0,12957,30492,41194,60392,63503,79873,93627,100652,140071,163744,190294,193676,215831,216702,223318,223969,228958,230955,232118,232465,234460,234822,246044,
#Deleted in new
chr18	79117206	79117920	chr18:79117206-79117920	3	+	79117206	79117206	8553170	1	714,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	79126266	79144286	chr18:79126266-79144286	0	+	79126266	79126266	8553170	2	109,485,	0,17535,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	79144751	79146918	chr18:79144751-79146918	3	+	79144751	79144751	8553170	1	2167,	0,
#Partially deleted in new
chr18	79154501	79194608	chr18:79154501-79194608	0	+	79154501	79154501	8553170	4	54,95,81,223,	0,22311,38681,39884,
#Partially deleted in new
chr18	79206935	79277264	chr18:79206935-79277264	0	+	79206935	79206935	8553170	4	77,77,161,211,	0,7026,46445,70118,
#Partially deleted in new
chr18	79206976	79277200	chr18:79206976-79277200	0	+	79206976	79253400	789624	3	36,161,147,	0,46404,70077,
#Deleted in new
chr18	79253576	79254856	chr18:79253576-79254856	3	-	79253576	79253576	8553170	2	229,499,	0,781,
#Partially deleted in new
chr18	79299898	79329213	chr18:79299898-79329213	0	+	79299898	79299898	8553170	4	93,113,249,73,	0,3705,7087,29242,
#Partially deleted in new
chr18	79303603	79307440	chr18:79303603-79307440	0	+	79303603	79303603	8553170	2	113,455,	0,3382,
#Partially deleted in new
chr18	79307111	79332998	chr18:79307111-79332998	0	+	79307111	79332887	789624	4	123,162,93,171,	0,22029,22900,25716,
#Partially deleted in new
chr18	79307189	79333000	chr18:79307189-79333000	0	+	79307189	79332976	789624	4	45,162,93,147,	0,21951,22822,25664,
#Partially deleted in new
chr18	79336625	79345486	chr18:79336625-79345486	0	+	79336625	79342290	789624	5	86,133,99,90,59,	0,691,5642,7639,8802,
#Partially deleted in new
chr18	79340257	79343972	chr18:79340257-79343972	3	-	79340257	79340257	8553170	2	204,298,	0,3417,
#Deleted in new
chr18	79344138	79345840	chr18:79344138-79345840	0	+	79344138	79344138	8553170	3	216,145,66,	0,1289,1636,
#Partially deleted in new
chr18	79344327	79378266	chr18:79344327-79378266	0	+	79344327	79373940	789624	8	27,145,65,156,109,58,204,1020,	0,1100,1447,3442,15026,28497,29570,32919,
#Partially deleted in new
chr18	79347807	79374197	chr18:79347807-79374197	0	+	79347807	79347807	8553170	4	118,109,58,300,	0,11546,25017,26090,
#Partially deleted in new
chr18	79347906	79378142	chr18:79347906-79378142	0	+	79347906	79373940	789624	8	19,65,109,127,58,204,33,896,	0,225,11447,24652,24918,25991,27487,29340,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	79352457	79354567	chr18:79352457-79354567	3	+	79352457	79352457	8553170	1	2110,	0,
#Partially deleted in new
chr18	79359395	79374027	chr18:79359395-79374027	0	+	79359395	79361783	789624	4	67,254,58,130,	0,2343,13429,14502,
#Partially deleted in new
chr18	79372389	79374275	chr18:79372389-79374275	0	+	79372389	79372389	8553170	2	493,378,	0,1508,
#Partially deleted in new
chr18	79395855	79529325	chr18:79395855-79529325	3	+	79396224	79527530	0	10	496,1099,160,203,173,141,56,133,383,1798,	0,14547,37723,52926,55098,55820,65455,71594,90392,131672,
#Partially deleted in new
chr18	79395929	79470014	chr18:79395929-79470014	1	+	79396224	79467641	0	8	422,1099,160,203,173,141,56,2565,	0,14473,37649,52852,55024,55746,65381,71520,
#Partially deleted in new
chr18	79395943	79529323	chr18:79395943-79529323	1	+	79448811	79527530	0	9	408,160,203,173,141,56,133,383,1796,	0,37635,52838,55010,55732,65367,71506,90304,131584,
#Partially deleted in new
chr18	79396130	79467676	chr18:79396130-79467676	1	+	79396224	79467495	789624	8	221,1099,160,203,88,141,56,227,	0,14272,37448,52651,54823,55545,65180,71319,
#Partially deleted in new
chr18	79396224	79527577	chr18:79396224-79527577	1	+	79396224	79527577	0	10	127,1099,160,203,173,141,56,133,690,50,	0,14178,37354,52557,54729,55451,65086,71225,90023,131303,
#Partially deleted in new
chr18	79396224	79527577	chr18:79396224-79527577	1	+	79396224	79527577	0	9	127,1099,160,203,173,141,56,133,50,	0,14178,37354,52557,54729,55451,65086,71225,131303,
#Partially deleted in new
chr18	79400273	79529323	chr18:79400273-79529323	1	+	79448811	79527577	789624	9	206,160,203,173,141,56,133,690,1796,	0,33305,48508,50680,51402,61037,67176,85974,127254,
#Partially deleted in new
chr18	79400321	79529323	chr18:79400321-79529323	1	+	79400391	79527530	0	10	158,1099,160,203,173,141,56,133,383,1796,	0,10081,33257,48460,50632,51354,60989,67128,85926,127206,
#Partially deleted in new
chr18	79400330	79527741	chr18:79400330-79527741	0	+	79400391	79433706	789624	9	149,160,203,173,141,56,133,690,214,	0,33248,48451,50623,51345,60980,67119,85917,127197,
#Partially deleted in new
chr18	79400332	79468001	chr18:79400332-79468001	1	+	79400391	79467641	0	8	147,1099,160,203,173,141,56,552,	0,10070,33246,48449,50621,51343,60978,67117,
#Partially deleted in new
chr18	79400335	79529323	chr18:79400335-79529323	1	+	79400391	79527577	0	10	144,1099,160,203,173,141,56,133,690,1796,	0,10067,33243,48446,50618,51340,60975,67114,85912,127192,
#Partially deleted in new
chr18	79400391	79527577	chr18:79400391-79527577	1	+	79400391	79527577	0	9	88,1099,160,203,173,141,56,133,50,	0,10011,33187,48390,50562,51284,60919,67058,127136,
#Deleted in new
chr18	79420835	79422780	chr18:79420835-79422780	3	+	79420835	79420835	8553170	1	1945,	0,
#Deleted in new
chr18	79448269	79451068	chr18:79448269-79451068	0	+	79448269	79448269	8553170	3	132,203,115,	0,512,2684,
#Deleted in new
chr18	79448571	79451068	chr18:79448571-79451068	0	+	79448571	79448571	8553170	2	413,115,	0,2382,
#Deleted in new
chr18	79451078	79452131	chr18:79451078-79452131	0	+	79451078	79451078	8553170	2	48,456,	0,597,
#Deleted in new
chr18	79470119	79470940	chr18:79470119-79470940	3	-	79470119	79470119	8553170	2	87,481,	0,340,
#Partially deleted in new
chr18	79493395	79527665	chr18:79493395-79527665	0	+	79493395	79493395	8553170	2	428,138,	0,34132,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	79496057	79498348	chr18:79496057-79498348	3	+	79496057	79496057	8553170	1	2291,	0,
#Deleted in new
chr18	79515797	79516057	chr18:79515797-79516057	3	-	79515797	79515797	8553170	1	260,	0,
#Deleted in new
chr18	79523923	79529083	chr18:79523923-79529083	0	+	79523923	79523923	8553170	2	112,1556,	0,3604,
#Deleted in new
chr18	79527118	79528578	chr18:79527118-79528578	0	+	79527118	79527118	8553170	2	284,1051,	0,409,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	79576459	79579808	chr18:79576459-79579808	0	+	79576459	79576459	8553170	1	3349,	0,
#Partially deleted in new
chr18	79578062	79589010	chr18:79578062-79589010	3	+	79578062	79578062	8553170	4	1358,218,220,2371,	0,3430,7008,8577,
#Partially deleted in new
chr18	79610746	79612303	chr18:79610746-79612303	3	+	79610746	79610746	8553170	2	452,133,	0,1424,
#Partially deleted in new
chr18	79638927	79679745	chr18:79638927-79679745	3	-	79638927	79638927	789624	5	192,132,269,166,352,	0,2240,2943,21711,40466,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	79677286	79679358	chr18:79677286-79679358	3	-	79677286	79677286	8553170	1	2072,	0,
#Partially deleted in new
chr18	79679800	79756623	chr18:79679800-79756623	3	+	79679947	79753790	0	13	461,84,94,129,151,91,167,1038,142,207,163,167,2972,	0,15424,16176,18059,24966,30545,33171,34690,37734,38009,49106,56554,73851,
#Partially deleted in new
chr18	79679845	79754503	chr18:79679845-79754503	1	+	79679947	79753671	0	12	416,84,94,129,151,91,167,1038,142,207,167,852,	0,15379,16131,18014,24921,30500,33126,34645,37689,37964,56509,73806,
#Partially deleted in new
chr18	79680151	79754503	chr18:79680151-79754503	0	+	79680151	79753675	789624	12	110,84,94,129,151,91,167,1038,142,207,163,852,	0,15073,15825,17708,24615,30194,32820,34339,37383,37658,48755,73500,
#Partially deleted in new
chr18	79680848	79697960	chr18:79680848-79697960	0	+	79695267	79697960	789624	5	128,82,84,94,101,	0,587,14376,15128,17011,
#Partially deleted in new
chr18	79681429	79754510	chr18:79681429-79754510	1	+	79695267	79753790	789624	13	88,84,94,129,151,91,167,1038,142,207,163,167,859,	0,13795,14547,16430,23337,28916,31542,33061,36105,36380,47477,54925,72222,
#Deleted in new
chr18	79681458	79685591	chr18:79681458-79685591	0	+	79681458	79681458	8553170	3	59,107,269,	0,1584,3864,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	79702720	79703651	chr18:79702720-79703651	3	-	79702720	79702720	8553170	2	387,87,	0,844,
#Partially deleted in new
chr18	79735609	79754501	chr18:79735609-79754501	0	+	79735609	79735609	8553170	2	912,850,	0,18042,
#Partially deleted in new
chr18	79736352	79749997	chr18:79736352-79749997	0	+	79736352	79736352	8553170	2	169,212,	0,13433,
#Deleted in new
chr18	79787120	79791432	chr18:79787120-79791432	3	+	79787120	79787120	8553170	2	503,133,	0,4179,
#Partially deleted in new
chr18	79792725	79816529	chr18:79792725-79816529	3	+	79792725	79792725	8553170	2	76,451,	0,23353,
#Partially deleted in new
chr18	79863667	79899816	chr18:79863667-79899816	3	+	79863667	79899816	789624	2	624,777,	0,35372,
#Partially deleted in new
chr18	79875883	79900184	chr18:79875883-79900184	0	+	79875883	79875883	8553170	2	393,1145,	0,23156,
#Deleted in new
chr18	79900554	79900903	chr18:79900554-79900903	3	-	79900554	79900554	8553170	1	349,	0,
#Partially deleted in new
chr18	79902419	79951638	chr18:79902419-79951638	1	-	79903975	79950926	789624	5	1764,217,134,302,58,	0,16764,40909,48304,49161,
#Partially deleted in new
chr18	79902419	79951664	chr18:79902419-79951664	3	-	79903975	79950926	789624	6	1764,217,54,134,302,84,	0,16764,31549,40909,48304,49161,
#Partially deleted in new
chr18	79902420	79950817	chr18:79902420-79950817	0	-	79949708	79950817	789624	6	1763,217,54,134,152,94,	0,16763,31548,40908,47266,48303,
#Partially deleted in new
chr18	79903445	79951653	chr18:79903445-79951653	1	-	79904121	79950926	789624	4	738,134,302,73,	0,39883,47278,48135,
#Partially deleted in new
chr18	79903893	79915961	chr18:79903893-79915961	0	-	79903893	79903893	8553170	2	290,575,	0,11493,
#Partially deleted in new
chr18	79904051	79941750	chr18:79904051-79941750	0	-	79904051	79904051	8553170	3	132,217,244,	0,15132,37455,
#Partially deleted in new
chr18	79919227	79945232	chr18:79919227-79945232	0	-	79919227	79919227	8553170	6	173,54,134,91,108,106,	0,14741,24101,24522,25345,25899,
#Partially deleted in new
chr18	79919343	79950866	chr18:79919343-79950866	0	-	79919343	79950866	789624	4	57,134,75,143,	0,23985,27923,31380,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	79964560	79970822	chr18:79964560-79970822	3	+	79964735	79970451	789624	4	226,67,95,383,	0,2051,3528,5879,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	79964581	79966970	chr18:79964581-79966970	0	+	79964581	79964581	8553170	2	205,359,	0,2030,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	79964629	79970735	chr18:79964629-79970735	0	+	79964735	79966698	789624	4	157,155,192,296,	0,1982,3362,5810,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	79967492	79970805	chr18:79967492-79970805	0	+	79967492	79967492	8553170	2	691,366,	0,2947,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	79970042	79970817	chr18:79970042-79970817	0	+	79970042	79970042	8553170	1	775,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	79970810	79988593	chr18:79970810-79988593	3	-	79973684	79988392	0	3	3046,104,354,	0,6787,17429,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	79972874	80033949	chr18:79972874-80033949	1	-	79973684	79977641	789624	3	982,104,99,	0,4723,60976,
#Partially deleted in new
chr18	79973406	79988541	chr18:79973406-79988541	1	-	79973835	79988392	789624	2	450,302,	0,14833,
#Partially deleted in new
chr18	79973524	79988536	chr18:79973524-79988536	0	-	79976768	79988392	789624	4	332,70,104,297,	0,3193,4073,14715,
#Partially deleted in new
chr18	79973533	79988581	chr18:79973533-79988581	0	-	79986738	79988392	789624	5	323,70,104,149,342,	0,3184,4064,13068,14706,
#Partially deleted in new
chr18	79973541	79986734	chr18:79973541-79986734	0	-	79973541	79973541	8553170	2	315,133,	0,13060,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	79973565	79977917	chr18:79973565-79977917	1	-	79973684	79977641	789624	2	291,320,	0,4032,
#Partially deleted in new
chr18	79977330	79988537	chr18:79977330-79988537	1	-	79977542	79988392	789624	2	371,298,	0,10909,
#Partially deleted in new
chr18	79977597	79988502	chr18:79977597-79988502	0	-	79986738	79988392	789624	4	104,70,149,263,	0,8199,9004,10642,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	79977601	79988537	chr18:79977601-79988537	0	-	79979532	79988392	789624	3	100,308,298,	0,1731,10638,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	80034345	80097088	chr18:80034345-80097088	1	+	80034495	80069813	789624	3	308,109,1801,	0,35452,60942,
#Partially deleted in new
chr18	80034357	80046392	chr18:80034357-80046392	3	+	80034495	80046155	0	7	296,43,177,113,85,74,619,	0,2310,2972,4147,7777,9854,11416,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr18	80034384	80095521	chr18:80034384-80095521	2	+	80034495	80069813	789624	6	269,109,122,157,141,234,	0,35413,45302,46396,47967,60903,
#Partially deleted in new
chr18	80034388	80037504	chr18:80034388-80037504	0	+	80034388	80034388	8553170	3	265,43,258,	0,2279,2858,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	80034460	80036047	chr18:80034460-80036047	0	+	80034460	80034460	8553170	1	1587,	0,
#Partially deleted in new
chr18	80034465	80046397	chr18:80034465-80046397	1	+	80034495	80045937	0	6	188,43,177,113,74,624,	0,2202,2864,4039,9746,11308,
#Partially deleted in new
chr18	80037386	80080309	chr18:80037386-80080309	0	+	80037386	80069851	789624	3	120,109,623,	0,32411,42300,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	80041301	80046332	chr18:80041301-80046332	0	+	80041301	80041301	8553170	3	918,74,559,	0,2910,4472,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	80045942	80051545	chr18:80045942-80051545	0	+	80045942	80045942	8553170	3	102,80,262,	0,2171,5341,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	80046899	80081293	chr18:80046899-80081293	3	+	80046899	80046899	8553170	5	526,80,109,122,513,	0,1214,22898,32787,33881,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	80062751	80070758	chr18:80062751-80070758	1	+	80062751	80062751	8553170	3	4557,109,521,	0,7046,7486,
#Partially deleted in new
chr18	80066910	80095482	chr18:80066910-80095482	0	+	80066910	80066910	8553170	4	135,109,122,195,	0,2887,12776,28377,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr18	80067255	80081238	chr18:80067255-80081238	0	+	80067255	80067255	789624	4	53,109,122,458,	0,2542,12431,13525,
#Deleted in new
chr18	80077706	80078259	chr18:80077706-80078259	7	+	80077706	80077706	16724991	1	553,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr18	80082152	80095457	chr18:80082152-80095457	0	+	80082152	80082152	8553170	2	340,170,	0,13135,
#Partially deleted in new
chr18	80109030	80140351	chr18:80109030-80140351	3	+	80117542	80138809	789624	4	442,121,90,4740,	0,8499,24072,26581,
#Partially deleted in new
chr18	80109292	80136166	chr18:80109292-80136166	0	+	80117542	80136166	789624	4	180,55,90,555,	0,8237,23810,26319,
#Partially deleted in new
chr18	80109725	80135927	chr18:80109725-80135927	0	+	80117542	80135927	789624	4	296,121,90,316,	0,7804,23377,25886,
#Partially deleted in new
chr18	80117607	80136010	chr18:80117607-80136010	0	+	80117607	80133805	789624	4	43,90,115,399,	0,15495,16084,18004,
#Partially deleted in new
chr18	80117615	80147523	chr18:80117615-80147523	0	+	80117615	80147479	789624	2	35,89,	0,29819,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	80147923	80169182	chr18:80147923-80169182	0	+	80147923	80147923	8553170	3	331,88,165,	0,14592,21094,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	80147924	80171733	chr18:80147924-80171733	1	+	80147924	80147924	789624	3	330,88,2915,	0,14591,20894,
#Partially deleted in new
chr18	80148010	80178432	chr18:80148010-80178432	3	+	80148010	80148010	789624	3	244,56,347,	0,27869,30075,
#Partially deleted in new
chr18	80148048	80169137	chr18:80148048-80169137	0	+	80148048	80148048	8553170	2	206,319,	0,20770,
#Deleted in new
chr18	80148048	80149273	chr18:80148048-80149273	0	+	80148048	80148048	8553170	2	206,852,	0,373,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr18	80157231	80247546	chr18:80157231-80247546	3	-	80159770	80247348	789624	3	3375,223,270,	0,45478,90045,
#Deleted in new
chr18	80161751	80162413	chr18:80161751-80162413	3	+	80161751	80161751	8553170	1	662,	0,
#Partially deleted in new
chr18	80182849	80247348	chr18:80182849-80247348	1	-	80183121	80247348	789624	3	301,223,72,	0,19860,64427,
#Partially deleted in new
chr18	80182855	80202881	chr18:80182855-80202881	0	-	80202004	80202881	789624	3	295,55,172,	0,19108,19854,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr18	80183679	80202992	chr18:80183679-80202992	3	+	80183679	80183679	8553170	5	1085,212,159,190,389,	0,4051,5601,13769,18924,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr18	80183723	80184961	chr18:80183723-80184961	0	+	80183723	80183723	8553170	1	1238,	0,
#Deleted in new
chr18_GL383567v1_alt	9996	21402	chr18_GL383567v1_alt:9996-21402	3	+	9996	9996	8553170	2	43,395,	0,11011,
#Deleted in new
chr18_GL383567v1_alt	26226	26831	chr18_GL383567v1_alt:26226-26831	7	+	26226	26226	16724991	1	605,	0,
#Deleted in new
chr18_GL383567v1_alt	26808	26927	chr18_GL383567v1_alt:26808-26927	7	+	26808	26808	16724991	1	119,	0,
#Deleted in new
chr18_GL383567v1_alt	82801	101980	chr18_GL383567v1_alt:82801-101980	3	+	83637	100054	0	7	200,99,125,98,138,170,2075,	0,825,5131,7134,10221,16129,17104,
#Deleted in new
chr18_GL383567v1_alt	82846	100054	chr18_GL383567v1_alt:82846-100054	1	+	83637	100054	0	7	200,99,125,98,138,170,149,	0,780,5086,7089,10176,16084,17059,
#Deleted in new
chr18_GL383567v1_alt	82849	100356	chr18_GL383567v1_alt:82849-100356	1	+	83637	100054	0	6	152,99,125,98,170,451,	0,777,5083,7086,16081,17056,
#Deleted in new
chr18_GL383567v1_alt	82852	100058	chr18_GL383567v1_alt:82852-100058	1	+	98934	100054	789624	5	149,99,98,170,153,	0,774,7083,16078,17053,
#Deleted in new
chr18_GL383567v1_alt	82867	99967	chr18_GL383567v1_alt:82867-99967	0	+	93119	99967	789624	6	179,99,98,138,170,62,	0,759,7068,10155,16063,17038,
#Deleted in new
chr18_GL383567v1_alt	172908	173817	chr18_GL383567v1_alt:172908-173817	7	+	172908	172908	16724991	1	909,	0,
#Deleted in new
chr18_GL383567v1_alt	275116	275282	chr18_GL383567v1_alt:275116-275282	3	+	275116	275116	8553170	1	166,	0,
#Deleted in new
chr18_GL383567v1_alt	275171	275282	chr18_GL383567v1_alt:275171-275282	0	+	275171	275171	8553170	1	111,	0,
#Deleted in new
chr18_GL383567v1_alt	275180	275282	chr18_GL383567v1_alt:275180-275282	0	+	275180	275180	8553170	1	102,	0,
#Deleted in new
chr18_GL383567v1_alt	275680	275798	chr18_GL383567v1_alt:275680-275798	0	+	275680	275680	8553170	1	118,	0,
#Deleted in new
chr18_GL383569v1_alt	11698	12985	chr18_GL383569v1_alt:11698-12985	3	+	11698	11698	8553170	2	336,102,	0,1185,
#Deleted in new
chr18_GL383569v1_alt	50628	50722	chr18_GL383569v1_alt:50628-50722	3	-	50628	50628	8553170	1	94,	0,
#Deleted in new
chr18_GL383570v1_alt	139514	140198	chr18_GL383570v1_alt:139514-140198	7	+	139514	139514	16724991	1	684,	0,
#Deleted in new
chr18_GL383571v1_alt	33776	34832	chr18_GL383571v1_alt:33776-34832	3	+	33776	33776	8553170	1	1056,	0,
#Deleted in new
chr18_GL383571v1_alt	127520	130693	chr18_GL383571v1_alt:127520-130693	3	-	127520	127520	8553170	1	3173,	0,
#Deleted in new
chr18_GL383571v1_alt	152308	162707	chr18_GL383571v1_alt:152308-162707	3	-	156696	160365	789624	2	8911,620,	0,9779,
#Deleted in new
chr18_GL383571v1_alt	152315	159757	chr18_GL383571v1_alt:152315-159757	3	+	152315	152315	8553170	2	291,2998,	0,4444,
#Deleted in new
chr18_GL383571v1_alt	152315	157023	chr18_GL383571v1_alt:152315-157023	0	+	152315	152315	8553170	2	307,247,	0,4461,
#Deleted in new
chr18_GL383571v1_alt	162272	162476	chr18_GL383571v1_alt:162272-162476	3	+	162272	162272	8553170	1	204,	0,
#Deleted in new
chr18_GL383572v1_alt	41669	43957	chr18_GL383572v1_alt:41669-43957	3	-	41669	41669	8553170	2	875,380,	0,1908,
#Deleted in new
chr18_GL383572v1_alt	42402	42998	chr18_GL383572v1_alt:42402-42998	1	-	42402	42402	8553170	2	142,329,	0,267,
#Deleted in new
chr18_GL383572v1_alt	43465	44189	chr18_GL383572v1_alt:43465-44189	0	-	43465	43465	8553170	2	388,35,	0,689,
#Deleted in new
chr18_GL383572v1_alt	45389	62441	chr18_GL383572v1_alt:45389-62441	1	+	45389	62441	789624	3	82,3389,432,	0,11801,16620,
#Deleted in new
chr18_GL383572v1_alt	45389	62516	chr18_GL383572v1_alt:45389-62516	3	+	45389	62441	789624	5	82,173,1852,341,507,	0,11801,12781,14849,16620,
#Deleted in new
chr18_GL383572v1_alt	45403	62684	chr18_GL383572v1_alt:45403-62684	0	+	45403	62441	789624	4	68,2832,341,675,	0,11787,14835,16606,
#Deleted in new
chr18_GL383572v1_alt	50124	57279	chr18_GL383572v1_alt:50124-57279	0	+	50124	50124	8553170	2	61,89,	0,7066,
#Deleted in new
chr18_GL383572v1_alt	59914	67793	chr18_GL383572v1_alt:59914-67793	0	+	59914	67407	789624	3	108,341,389,	0,324,7490,
#Deleted in new
chr18_GL383572v1_alt	139951	140079	chr18_GL383572v1_alt:139951-140079	3	+	139960	140079	789624	1	128,	0,
#Deleted in new
chr18_GL383572v1_alt	139955	140079	chr18_GL383572v1_alt:139955-140079	0	+	139955	139955	8553170	1	124,	0,
#Deleted in new
chr18_KI270863v1_alt	13338	16687	chr18_KI270863v1_alt:13338-16687	0	+	13338	13338	8553170	1	3349,	0,
#Deleted in new
chr18_KI270863v1_alt	14941	25889	chr18_KI270863v1_alt:14941-25889	3	+	14941	14941	8553170	4	1358,218,220,2371,	0,3430,7008,8577,
#Deleted in new
chr18_KI270863v1_alt	47520	49077	chr18_KI270863v1_alt:47520-49077	3	+	47520	47520	8553170	2	452,133,	0,1424,
#Deleted in new
chr18_KI270863v1_alt	81560	122378	chr18_KI270863v1_alt:81560-122378	3	-	81560	81560	789624	5	192,132,269,166,352,	0,2240,2943,21711,40466,
#Deleted in new
chr18_KI270863v1_alt	119919	121991	chr18_KI270863v1_alt:119919-121991	3	-	119919	119919	8553170	1	2072,	0,
#Deleted in new
chr18_KI270863v1_alt	122433	160649	chr18_KI270863v1_alt:122433-160649	3	+	122580	160649	789624	10	461,84,94,129,151,91,167,1038,142,207,	0,15424,16176,18059,24966,30545,33171,34690,37734,38009,
#Deleted in new
chr18_KI270863v1_alt	122478	160649	chr18_KI270863v1_alt:122478-160649	0	+	122580	160649	789624	10	416,84,94,129,151,91,167,1038,142,207,	0,15379,16131,18014,24921,30500,33126,34645,37689,37964,
#Deleted in new
chr18_KI270863v1_alt	122784	160649	chr18_KI270863v1_alt:122784-160649	0	+	122784	160649	789624	10	110,84,94,129,151,91,167,1038,142,207,	0,15073,15825,17708,24615,30194,32820,34339,37383,37658,
#Deleted in new
chr18_KI270863v1_alt	123481	140593	chr18_KI270863v1_alt:123481-140593	0	+	137900	140593	789624	5	128,82,84,94,101,	0,587,14376,15128,17011,
#Deleted in new
chr18_KI270863v1_alt	124091	128224	chr18_KI270863v1_alt:124091-128224	0	+	124091	124091	8553170	3	59,107,269,	0,1584,3864,
#Deleted in new
chr18_KI270863v1_alt	145353	146284	chr18_KI270863v1_alt:145353-146284	3	-	145353	145353	8553170	2	387,87,	0,844,
#Deleted in new
chr18_KI270911v1_alt	41669	43958	chr18_KI270911v1_alt:41669-43958	3	-	41669	41669	8553170	2	875,381,	0,1908,
#Deleted in new
chr18_KI270911v1_alt	42209	43958	chr18_KI270911v1_alt:42209-43958	0	-	42209	42209	8553170	2	335,58,	0,1691,
#Deleted in new
chr18_KI270911v1_alt	42402	42998	chr18_KI270911v1_alt:42402-42998	0	-	42402	42402	8553170	2	142,329,	0,267,
#Deleted in new
chr18_KI270911v1_alt	43465	44189	chr18_KI270911v1_alt:43465-44189	0	-	43465	43465	8553170	2	388,35,	0,689,
#Deleted in new
chr18_KI270911v1_alt	45389	62512	chr18_KI270911v1_alt:45389-62512	1	+	45389	62437	789624	5	82,179,1849,341,507,	0,11799,12782,14847,16616,
#Deleted in new
chr18_KI270911v1_alt	45389	65089	chr18_KI270911v1_alt:45389-65089	3	+	45389	62437	789624	3	82,3389,3084,	0,11799,16616,
#Deleted in new
chr18_KI270911v1_alt	45389	62746	chr18_KI270911v1_alt:45389-62746	1	+	45389	62437	789624	4	82,2832,341,741,	0,11799,14847,16616,
#Deleted in new
chr18_KI270911v1_alt	50124	57277	chr18_KI270911v1_alt:50124-57277	0	+	50124	50124	8553170	2	61,89,	0,7064,
#Deleted in new
chr18_KI270911v1_alt	56796	62437	chr18_KI270911v1_alt:56796-62437	1	+	57505	62437	789624	3	3224,341,432,	0,3440,5209,
#Deleted in new
chr18_KI270911v1_alt	59912	67792	chr18_KI270911v1_alt:59912-67792	0	+	59912	67406	789624	3	108,341,389,	0,324,7491,
#Deleted in new
chr18_KI270911v1_alt	137997	146870	chr18_KI270911v1_alt:137997-146870	3	+	138123	146870	789624	2	245,176,	0,8697,
#Deleted in new
chr18_KI270911v1_alt	138104	138242	chr18_KI270911v1_alt:138104-138242	0	+	138123	138242	789624	1	138,	0,
#Deleted in new
chr18_KI270911v1_alt	138106	138242	chr18_KI270911v1_alt:138106-138242	0	+	138123	138242	789624	1	136,	0,
#Deleted in new
chr18_KI270911v1_alt	138109	138242	chr18_KI270911v1_alt:138109-138242	0	+	138123	138242	789624	1	133,	0,
#Deleted in new
chr18_KI270911v1_alt	138118	138242	chr18_KI270911v1_alt:138118-138242	0	+	138123	138242	789624	1	124,	0,
#Deleted in new
chr18_KI270911v1_alt	138120	138242	chr18_KI270911v1_alt:138120-138242	0	+	138123	138242	789624	1	122,	0,
#Deleted in new
chr18_KI270911v1_alt	138194	146870	chr18_KI270911v1_alt:138194-146870	0	+	138194	138194	8553170	2	48,176,	0,8500,
#Deleted in new
chr18_KI270911v1_alt	153846	155148	chr18_KI270911v1_alt:153846-155148	3	+	153846	153846	8553170	1	1302,	0,
#Deleted in new
chr18_KI270911v1_alt	156019	156391	chr18_KI270911v1_alt:156019-156391	0	+	156019	156019	8553170	1	372,	0,
#Deleted in new
chr18_KI270911v1_alt	156027	156391	chr18_KI270911v1_alt:156027-156391	0	+	156027	156027	8553170	1	364,	0,
#Deleted in new
chr18_KI270912v1_alt	11698	12944	chr18_KI270912v1_alt:11698-12944	3	+	11698	11698	8553170	2	336,61,	0,1185,
#Deleted in new
chr18_KI270912v1_alt	50628	50722	chr18_KI270912v1_alt:50628-50722	3	-	50628	50628	8553170	1	94,	0,
#Deleted in new
chr18_KQ090028v1_fix	24064	352487	chr18_KQ090028v1_fix:24064-352487	1	+	104583	348829	789624	12	267,208,72,74,105,76,77,487,300,156,54,3874,	0,80491,97575,124731,125426,131655,176824,223124,226595,282426,322793,324549,
#Deleted in new
chr18_KQ090028v1_fix	24176	351176	chr18_KQ090028v1_fix:24176-351176	3	+	104583	348829	789624	13	155,74,208,72,74,105,76,77,493,300,156,54,2563,	0,600,80379,97463,124619,125314,131543,176712,223012,226483,282314,322681,324437,
#Deleted in new
chr18_KQ090028v1_fix	24228	148855	chr18_KQ090028v1_fix:24228-148855	0	+	104583	148855	789624	5	103,208,48,72,60,	0,80327,85977,97411,124567,
#Deleted in new
chr18_KQ090028v1_fix	24433	149578	chr18_KQ090028v1_fix:24433-149578	0	+	104583	149578	789624	5	417,208,72,74,88,	0,80122,97206,124362,125057,
#Deleted in new
chr18_KQ090028v1_fix	25006	200965	chr18_KQ090028v1_fix:25006-200965	0	+	104583	200965	789624	7	71,208,72,74,105,76,77,	0,79549,96633,123789,124484,130713,175882,
#Deleted in new
chr18_KQ090028v1_fix	25113	148856	chr18_KQ090028v1_fix:25113-148856	0	+	104583	148856	789624	4	243,208,72,61,	0,79442,96526,123682,
#Deleted in new
chr18_KQ090028v1_fix	49813	53361	chr18_KQ090028v1_fix:49813-53361	3	+	49813	49813	8553170	1	3548,	0,
#Deleted in new
chr18_KQ090028v1_fix	106460	200927	chr18_KQ090028v1_fix:106460-200927	0	+	106460	106460	8553170	6	198,72,74,105,76,39,	0,15179,42335,43030,49259,94428,
#Deleted in new
chr18_KQ090028v1_fix	155650	155719	chr18_KQ090028v1_fix:155650-155719	3	+	155650	155650	5263520	1	69,	0,
#Deleted in new
chr18_KQ090028v1_fix	162844	177689	chr18_KQ090028v1_fix:162844-177689	3	-	162844	162844	8553170	3	102,196,167,	0,9382,14678,
#Deleted in new
chr18_KQ090028v1_fix	181781	247499	chr18_KQ090028v1_fix:181781-247499	0	+	181781	181781	8553170	3	159,77,311,	0,19107,65407,
#Deleted in new
chr18_KQ090028v1_fix	244962	245588	chr18_KQ090028v1_fix:244962-245588	3	+	244962	244962	8553170	1	626,	0,
#Deleted in new
chr18_KQ090028v1_fix	249451	349835	chr18_KQ090028v1_fix:249451-349835	0	+	249451	249451	8553170	4	1508,156,54,1222,	0,57039,97406,99162,
#Deleted in new
chr18_KQ090028v1_fix	315320	324040	chr18_KQ090028v1_fix:315320-324040	3	-	315320	315320	8553170	2	798,79,	0,8641,
#Deleted in new
chr18_KQ090028v1_fix	349151	351625	chr18_KQ090028v1_fix:349151-351625	0	+	349151	349151	8553170	3	548,76,328,	0,1335,2146,
#Deleted in new
chr18_KQ090028v1_fix	351813	352478	chr18_KQ090028v1_fix:351813-352478	0	+	351813	351813	8553170	2	82,330,	0,335,
#Deleted in new
chr18_KQ458385v1_alt	24921	26188	chr18_KQ458385v1_alt:24921-26188	1	-	25950	26175	789624	1	1267,	0,
#Deleted in new
chr18_KQ458385v1_alt	24923	29236	chr18_KQ458385v1_alt:24923-29236	3	-	26894	29132	789624	1	4313,	0,
#Deleted in new
chr18_KQ458385v1_alt	30149	30615	chr18_KQ458385v1_alt:30149-30615	7	-	30149	30149	16724991	1	466,	0,
#Deleted in new
chr18_KQ458385v1_alt	203465	204228	chr18_KQ458385v1_alt:203465-204228	7	+	203465	203465	16724991	1	763,	0,
#Deleted in new
chr18_KZ208922v1_fix	7143	8038	chr18_KZ208922v1_fix:7143-8038	7	+	7143	7143	16724991	1	895,	0,
#Deleted in new
chr18_KZ208922v1_fix	72439	74015	chr18_KZ208922v1_fix:72439-74015	3	+	72439	72439	8553170	1	1576,	0,
#Deleted in new
chr18_KZ559115v1_fix	43878	55412	chr18_KZ559115v1_fix:43878-55412	0	-	43878	43878	8553170	2	393,99,	0,11435,
#Deleted in new
chr18_KZ559115v1_fix	44224	103333	chr18_KZ559115v1_fix:44224-103333	1	-	44224	44224	8553170	6	47,127,76,85,111,48,	0,11089,12533,23146,58387,59061,
#Deleted in new
chr18_KZ559115v1_fix	58288	67461	chr18_KZ559115v1_fix:58288-67461	1	-	58288	58288	8553170	3	172,96,91,	0,2203,9082,
#Deleted in new
chr18_KZ559115v1_fix	58300	67738	chr18_KZ559115v1_fix:58300-67738	3	-	58300	58300	8553170	2	160,368,	0,9070,
#Deleted in new
chr18_KZ559115v1_fix	103459	148420	chr18_KZ559115v1_fix:103459-148420	0	+	103459	103459	8553170	3	112,68,450,	0,8717,44511,
#Deleted in new
chr18_KZ559115v1_fix	103459	149969	chr18_KZ559115v1_fix:103459-149969	3	+	103459	103459	8553170	2	112,1999,	0,44511,
#Deleted in new
chr18_KZ559115v1_fix	103474	113384	chr18_KZ559115v1_fix:103474-113384	1	+	103474	103474	8553170	4	97,39,68,217,	0,6547,8702,9693,
#Deleted in new
chr18_KZ559115v1_fix	103484	105431	chr18_KZ559115v1_fix:103484-105431	0	+	103484	103484	8553170	2	87,172,	0,1775,
#Deleted in new
chr18_KZ559115v1_fix	111695	123939	chr18_KZ559115v1_fix:111695-123939	3	-	111695	111695	8553170	3	546,138,51,	0,2501,12193,
#Deleted in new
chr18_KZ559115v1_fix	127334	170297	chr18_KZ559115v1_fix:127334-170297	3	+	127334	127334	8553170	4	213,159,164,190,	0,8242,34999,42773,
#Deleted in new
chr18_KZ559116v1_alt	36147	37883	chr18_KZ559116v1_alt:36147-37883	3	+	36147	36147	8553170	3	161,62,351,	0,249,1385,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	60950	70976	chr19:60950-70976	7	-	60950	60950	16724991	3	944,154,49,	0,5395,9977,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	62112	66524	chr19:62112-66524	4	-	62112	62112	16724991	1	4412,	0,
#Partially deleted in new
chr19	63820	70951	chr19:63820-70951	4	-	63820	63820	16724991	3	393,154,24,	0,2525,7107,
#Partially deleted in new
chr19	65050	66382	chr19:65050-66382	4	-	65050	65050	16724991	2	176,37,	0,1295,
#Partially deleted in new
chr19	65821	70963	chr19:65821-70963	4	-	65821	65821	16724991	2	678,36,	0,5106,
#Partially deleted in new
chr19	65821	70945	chr19:65821-70945	4	-	65821	65821	16724991	3	226,154,18,	0,524,5106,
#Deleted in new
chr19	65821	66420	chr19:65821-66420	4	-	65821	65821	16724991	2	312,75,	0,524,
#Deleted in new
chr19	66319	66492	chr19:66319-66492	5	-	66319	66319	16724991	1	173,	0,
#Partially deleted in new
chr19	66377	71566	chr19:66377-71566	4	-	66377	66377	16724991	2	122,426,	0,4763,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	68402	69178	chr19:68402-69178	3	+	68402	68402	8553170	1	776,	0,
#Deleted in new
chr19	69166	69972	chr19:69166-69972	3	+	69166	69166	8553170	1	806,	0,
#Deleted in new
chr19	70651	71626	chr19:70651-71626	5	-	70651	70651	16724991	1	975,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	71777	72718	chr19:71777-72718	3	+	71777	71777	8553170	2	497,134,	0,807,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	71972	72110	chr19:71972-72110	3	+	71972	71972	5263520	1	138,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	76162	77686	chr19:76162-77686	3	-	76162	76162	789624	3	621,205,357,	0,723,1167,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	76219	77659	chr19:76219-77659	0	-	76219	76219	8553170	2	871,330,	0,1110,
#Deleted in new
chr19	94061	94974	chr19:94061-94974	7	+	94061	94061	16724991	1	913,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	99174	106077	chr19:99174-106077	5	+	99174	99174	16724991	3	55,157,1576,	0,1101,5327,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	99174	106077	chr19:99174-106077	7	+	99174	99174	16724991	2	55,1576,	0,5327,
#Deleted in new
chr19	104534	105472	chr19:104534-105472	5	+	104534	104534	16724991	1	938,	0,
#Deleted in new
chr19	107103	113156	chr19:107103-113156	3	+	110678	111596	789624	3	54,83,2532,	0,369,3521,
#Deleted in new
chr19	107103	113156	chr19:107103-113156	1	+	107148	111596	789624	2	54,2532,	0,3521,
#Deleted in new
chr19	110642	111696	chr19:110642-111696	1	+	110678	111596	789624	1	1054,	0,
#Partially deleted in new
chr19	145484	145812	chr19:145484-145812	7	+	145484	145484	16724991	1	328,	0,
#Deleted in new
chr19	156278	157215	chr19:156278-157215	7	-	156278	156278	16724991	1	937,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	176895	177913	chr19:176895-177913	3	+	176895	176895	8553170	1	1018,	0,
#Partially deleted in new
chr19	186372	191429	chr19:186372-191429	7	-	186372	186372	16724991	2	126,244,	0,4813,
#Deleted in new
chr19	191114	191325	chr19:191114-191325	5	-	191114	191114	16724991	1	211,	0,
#Partially deleted in new
chr19	191211	195696	chr19:191211-195696	5	-	191211	191211	16724991	2	143,193,	0,4292,
#Deleted in new
chr19	193238	195595	chr19:193238-195595	7	+	193238	193238	16724991	1	2357,	0,
#Deleted in new
chr19	197309	198066	chr19:197309-198066	7	-	197309	197309	16724991	1	757,	0,
#Deleted in new
chr19	197960	198396	chr19:197960-198396	5	+	197960	197960	16724991	1	436,	0,
#Deleted in new
chr19	198051	200775	chr19:198051-200775	7	+	198051	198051	16724991	2	183,198,	0,2526,
#Deleted in new
chr19	198263	200507	chr19:198263-200507	1	-	198263	198263	8553170	2	332,117,	0,2127,
#Deleted in new
chr19	199375	201002	chr19:199375-201002	1	-	199375	199375	8553170	2	236,612,	0,1015,
#Deleted in new
chr19	199834	200736	chr19:199834-200736	1	-	199834	199834	8553170	2	215,346,	0,556,
#Deleted in new
chr19	200498	201174	chr19:200498-201174	7	-	200498	200498	16724991	1	676,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	201346	209396	chr19:201346-209396	1	-	201346	201346	8553170	5	316,58,195,65,172,	0,409,2524,6980,7878,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	201353	204024	chr19:201353-204024	1	-	201353	201353	8553170	2	309,150,	0,2521,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	201359	205598	chr19:201359-205598	1	-	201359	201359	8553170	5	303,58,191,58,144,	0,396,2515,3810,4095,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	201361	204079	chr19:201361-204079	0	-	201361	201361	8553170	3	301,58,205,	0,394,2513,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	201403	208387	chr19:201403-208387	1	-	201403	201403	8553170	5	42,26,58,191,61,	0,233,352,2471,6923,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	201408	202158	chr19:201408-202158	0	-	201408	201408	8553170	2	254,403,	0,347,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	201522	209379	chr19:201522-209379	1	-	201522	201522	8553170	5	140,58,191,65,155,	0,233,2352,6804,7702,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	203904	209604	chr19:203904-209604	0	-	203904	203904	8553170	3	161,65,369,	0,4422,5331,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	203936	205598	chr19:203936-205598	1	-	203936	203936	8553170	4	133,233,58,144,	0,907,1233,1518,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	203940	205946	chr19:203940-205946	1	-	203940	203940	8553170	4	125,243,58,492,	0,893,1229,1514,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	208187	212219	chr19:208187-212219	0	-	208187	208187	8553170	3	204,124,202,	0,3574,3830,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	208247	209654	chr19:208247-209654	0	-	208247	208247	8553170	2	144,419,	0,988,
#Partially deleted in new
chr19	209218	224007	chr19:209218-224007	3	-	209218	209218	8553170	4	214,124,65,70,	0,2543,11922,14719,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	211251	230151	chr19:211251-230151	0	-	211251	211251	8553170	4	634,65,82,516,	0,9889,12715,18384,
#Partially deleted in new
chr19	211251	221199	chr19:211251-221199	0	-	211251	211251	8553170	2	464,59,	0,9889,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	214323	221504	chr19:214323-221504	0	-	214323	214323	8553170	2	128,364,	0,6817,
#Deleted in new
chr19	223157	223261	chr19:223157-223261	3	-	223157	223157	8553170	1	104,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	223912	229862	chr19:223912-229862	0	-	223912	223912	8553170	2	136,227,	0,5723,
#Partially deleted in new
chr19	224014	237967	chr19:224014-237967	1	-	224014	224014	8553170	5	34,59,66,216,32,	0,7242,9462,10411,13921,
#Partially deleted in new
chr19	233371	239440	chr19:233371-239440	0	-	233371	233371	8553170	4	171,216,132,311,	0,1054,4564,5758,
#Partially deleted in new
chr19	234423	239349	chr19:234423-239349	0	-	234423	234423	8553170	3	218,132,220,	0,3512,4706,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	248550	251571	chr19:248550-251571	3	-	248550	248550	8553170	1	3021,	0,
#Partially deleted in new
chr19	281039	291185	chr19:281039-291185	1	-	281387	291066	789624	6	498,177,58,278,152,234,	0,1094,1712,6434,6980,9912,
#Partially deleted in new
chr19	281039	291504	chr19:281039-291504	3	-	281387	291336	789624	6	498,177,58,278,152,220,	0,1094,1712,6434,6980,10245,
#Partially deleted in new
chr19	281042	291393	chr19:281042-291393	1	-	281387	288055	789624	6	495,177,58,278,152,68,	0,1091,1709,6431,6977,10283,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	281045	288537	chr19:281045-288537	0	-	281045	281045	8553170	3	492,177,5786,	0,1088,1706,
#Partially deleted in new
chr19	281462	291398	chr19:281462-291398	0	-	281462	288055	789624	6	75,177,58,278,152,110,	0,671,1289,6011,6557,9826,
#Partially deleted in new
chr19	281990	287636	chr19:281990-287636	0	-	282121	287636	789624	3	320,58,163,	0,761,5483,
#Partially deleted in new
chr19	282774	291382	chr19:282774-291382	0	-	282774	291336	789624	4	35,278,170,98,	0,4699,5245,8510,
#Deleted in new
chr19	287583	288538	chr19:287583-288538	0	-	287583	287583	8553170	2	168,519,	0,436,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	301443	344782	chr19:301443-344782	3	-	306689	344782	789624	14	5268,418,89,125,95,82,152,70,92,124,126,143,91,9,	0,5675,7133,7357,10401,10747,12048,24191,25063,25689,26420,32956,34639,43330,
#Deleted in new
chr19	305572	306467	chr19:305572-306467	3	+	305572	305572	8553170	2	131,411,	0,484,
#Deleted in new
chr19	305572	308923	chr19:305572-308923	0	-	306689	308923	789624	4	1139,418,89,102,	0,1546,3004,3249,
#Partially deleted in new
chr19	326593	344815	chr19:326593-344815	0	-	327874	344782	789624	5	5,124,126,143,42,	0,539,1270,7806,18180,
#Partially deleted in new
chr19	326619	344778	chr19:326619-344778	0	-	326619	326619	8553170	5	637,126,143,91,5,	0,1244,7780,9463,18154,
#Partially deleted in new
chr19	327063	336194	chr19:327063-336194	0	-	327063	327063	8553170	4	193,126,143,112,	0,800,7336,9019,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	327863	340599	chr19:327863-340599	0	-	327863	327863	8553170	5	126,117,143,91,86,	0,2400,6536,8219,12650,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	334114	344807	chr19:334114-344807	0	-	334114	334114	8553170	2	428,34,	0,10659,
#Partially deleted in new
chr19	361746	374620	chr19:361746-374620	1	-	362258	374384	789624	3	680,160,322,	0,5318,12552,
#Partially deleted in new
chr19	362056	375970	chr19:362056-375970	1	-	362199	375970	789624	7	370,160,118,70,62,123,308,	0,5008,9148,10574,11413,12242,13606,
#Partially deleted in new
chr19	362162	376670	chr19:362162-376670	3	-	362199	375970	789624	8	264,160,118,70,62,72,123,1008,	0,4902,9042,10468,11307,11777,12136,13500,
#Partially deleted in new
chr19	367201	374249	chr19:367201-374249	0	-	367201	367201	8553170	5	23,118,70,62,310,	0,4003,5429,6268,6738,
#Deleted in new
chr19	397588	399173	chr19:397588-399173	3	+	397588	397588	8553170	2	45,484,	0,1101,
#Deleted in new
chr19	405437	409170	chr19:405437-409170	3	-	407095	408361	789624	2	2964,165,	0,3568,
#Partially deleted in new
chr19	416582	460996	chr19:416582-460996	3	-	418927	460996	789624	13	740,134,311,135,64,157,127,52,54,120,61,71,468,	0,2340,5563,8514,14101,18126,19582,19797,20047,22135,22387,24279,43946,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	416588	419879	chr19:416588-419879	0	-	416588	416588	8553170	2	734,957,	0,2334,
#Partially deleted in new
chr19	416588	422828	chr19:416588-422828	0	-	416588	416588	8553170	3	734,134,683,	0,2334,5557,
#Partially deleted in new
chr19	417199	436268	chr19:417199-436268	0	-	422288	436268	789624	6	123,134,234,64,157,104,	0,1723,4946,13484,17509,18965,
#Partially deleted in new
chr19	430740	460571	chr19:430740-460571	0	-	439397	460571	789624	10	7,157,127,52,54,120,61,259,71,43,	0,3968,5424,5639,5889,7977,8229,8492,10121,29788,
#Partially deleted in new
chr19	435778	439267	chr19:435778-439267	0	-	435778	435778	8553170	7	183,127,52,54,120,61,35,	0,386,601,851,2939,3191,3454,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	453133	453245	chr19:453133-453245	7	+	453133	453133	16724991	1	112,	0,
#Partially deleted in new
chr19	463345	474983	chr19:463345-474983	3	-	463843	474747	789624	4	1019,114,108,363,	0,4303,9048,11275,
#Partially deleted in new
chr19	463345	474880	chr19:463345-474880	1	-	463843	474747	789624	3	1019,114,260,	0,4303,11275,
#Partially deleted in new
chr19	464166	472615	chr19:464166-472615	0	-	464166	464166	8553170	3	198,114,222,	0,3482,8227,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	489175	505342	chr19:489175-505342	1	+	490029	504965	789624	3	864,261,598,	0,12493,15569,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	490045	507833	chr19:490045-507833	3	-	490045	490045	8553170	3	308,84,458,	0,11495,17330,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	496453	505342	chr19:496453-505342	3	+	496499	504965	0	5	98,285,330,261,598,	0,1379,2042,5215,8291,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	496453	505340	chr19:496453-505340	1	+	496499	504965	0	4	98,285,330,596,	0,1379,2042,8291,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	496453	505207	chr19:496453-505207	1	+	496499	504965	789624	7	98,285,330,34,48,251,463,	0,1379,2042,3361,3658,5225,8291,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	496453	505207	chr19:496453-505207	1	+	496499	504965	789624	8	98,285,329,39,3,9,265,463,	0,1379,2042,2376,2417,2421,5211,8291,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	496453	505207	chr19:496453-505207	1	+	496499	504965	789624	8	98,285,330,12,23,23,251,463,	0,1379,2042,2584,2830,3594,5225,8291,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	496453	505207	chr19:496453-505207	1	+	496499	504965	789624	6	98,285,330,34,251,463,	0,1379,2042,3361,5225,8291,
#Partially deleted in new
chr19	496499	504965	chr19:496499-504965	1	+	496499	504965	0	3	52,330,221,	0,1996,8245,
#Partially deleted in new
chr19	496499	504965	chr19:496499-504965	1	+	496499	504965	789624	7	52,285,329,55,5,256,221,	0,1333,1996,2330,5167,5174,8245,
#Deleted in new
chr19	497816	498727	chr19:497816-498727	0	+	497816	497816	8553170	2	301,232,	0,679,
#Partially deleted in new
chr19	507496	519654	chr19:507496-519654	3	+	507506	519423	789624	2	348,766,	0,11392,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	507499	510372	chr19:507499-510372	0	+	507499	507499	8553170	1	2873,	0,
#Partially deleted in new
chr19	531711	542092	chr19:531711-542092	3	+	531931	541552	0	5	397,87,98,135,754,	0,4125,4531,5301,9627,
#Deleted in new
chr19	531768	536715	chr19:531768-536715	0	+	531768	531768	8553170	3	340,87,473,	0,4068,4474,
#Partially deleted in new
chr19	532031	542092	chr19:532031-542092	0	+	532031	541385	789624	5	77,87,98,135,750,	0,3805,4211,4981,9311,
#Partially deleted in new
chr19	532099	541585	chr19:532099-541585	0	+	532099	541552	789624	4	9,87,36,225,	0,3737,4143,9261,
#Partially deleted in new
chr19	535836	542087	chr19:535836-542087	0	+	535836	541385	789624	4	87,98,135,742,	0,406,1176,5509,
#Partially deleted in new
chr19	536952	542042	chr19:536952-542042	0	+	536952	536952	8553170	2	195,704,	0,4386,
#Deleted in new
chr19	541216	541661	chr19:541216-541661	0	+	541216	541216	8553170	2	36,323,	0,122,
#Partially deleted in new
chr19	544033	549924	chr19:544033-549924	1	+	547341	549791	789624	5	93,153,136,264,295,	0,3250,4508,4888,5596,
#Partially deleted in new
chr19	544034	549920	chr19:544034-549920	3	+	544071	549791	0	5	92,157,136,264,291,	0,3245,4507,4887,5595,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	567209	571745	chr19:567209-571745	0	-	567209	567209	8553170	2	415,306,	0,4230,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	567220	571736	chr19:567220-571736	3	-	567220	567220	8553170	3	428,157,40,	0,4219,4476,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	567310	571734	chr19:567310-571734	0	-	567310	567310	8553170	3	314,157,38,	0,4129,4386,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	571276	583493	chr19:571276-583493	1	+	580433	582577	0	8	303,157,83,137,277,25,69,744,	0,8223,9102,9369,10038,11029,11237,11473,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	571309	583493	chr19:571309-583493	1	+	571547	582577	0	7	270,83,137,277,25,69,744,	0,9069,9336,10005,10996,11204,11440,
#Partially deleted in new
chr19	572564	583493	chr19:572564-583493	3	+	572634	582577	0	9	137,348,157,83,137,277,25,69,744,	0,5209,6935,7814,8081,8750,9741,9949,10185,
#Partially deleted in new
chr19	572571	581376	chr19:572571-581376	0	+	572634	581376	789624	5	130,133,83,137,62,	0,6952,7807,8074,8743,
#Partially deleted in new
chr19	572571	579980	chr19:572571-579980	0	+	572571	572571	8553170	2	130,481,	0,6928,
#Partially deleted in new
chr19	572577	583493	chr19:572577-583493	1	+	572634	582577	0	8	124,157,83,137,277,25,69,744,	0,6922,7801,8068,8737,9728,9936,10172,
#Partially deleted in new
chr19	572593	580695	chr19:572593-580695	0	+	572593	572593	8553170	3	108,157,317,	0,6906,7785,
#Partially deleted in new
chr19	572595	578212	chr19:572595-578212	0	+	572595	572595	8553170	2	106,439,	0,5178,
#Partially deleted in new
chr19	572595	583360	chr19:572595-583360	0	+	572634	582515	789624	6	106,157,148,25,69,611,	0,6904,8848,9710,9918,10154,
#Partially deleted in new
chr19	572609	581543	chr19:572609-581543	0	+	572634	581543	789624	5	92,148,83,137,229,	0,6899,7769,8036,8705,
#Partially deleted in new
chr19	572618	583487	chr19:572618-583487	1	+	572634	582577	789624	6	83,137,277,25,69,738,	0,8027,8696,9687,9895,10131,
#Partially deleted in new
chr19	572622	583487	chr19:572622-583487	1	+	572634	582540	789624	4	79,80,63,738,	0,6877,9897,10127,
#Partially deleted in new
chr19	575046	581402	chr19:575046-581402	0	+	580433	581402	789624	5	94,157,83,137,88,	0,4453,5332,5599,6268,
#Partially deleted in new
chr19	575048	579629	chr19:575048-579629	0	+	575048	575048	8553170	3	92,348,130,	0,2725,4451,
#Partially deleted in new
chr19	575212	580775	chr19:575212-580775	0	+	580433	580775	789624	4	174,157,83,130,	0,4287,5166,5433,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	578849	583492	chr19:578849-583492	0	+	578849	578849	8553170	7	807,83,137,277,25,69,743,	0,1529,1796,2465,3456,3664,3900,
#Partially deleted in new
chr19	589892	617159	chr19:589892-617159	3	+	589945	616474	0	8	685,424,162,219,147,241,165,1365,	0,13651,15168,18071,20366,23355,23959,25902,
#Deleted in new
chr19	590429	591300	chr19:590429-591300	7	-	590429	590429	16724991	1	871,	0,
#Partially deleted in new
chr19	617223	633604	chr19:617223-633604	3	-	617273	633512	0	21	100,62,86,73,99,56,114,87,180,123,123,789,225,171,165,150,187,131,629,105,180,	0,195,346,553,1264,1481,1773,1986,2362,2734,3141,3834,4925,5358,5597,6230,7495,7900,12316,15610,16201,
#Deleted in new
chr19	617223	617997	chr19:617223-617997	0	-	617223	617223	8553170	4	100,62,86,221,	0,195,346,553,
#Deleted in new
chr19	617227	618758	chr19:617227-618758	0	-	617227	617227	8553170	4	96,62,1017,54,	0,191,342,1477,
#Deleted in new
chr19	617430	619016	chr19:617430-619016	0	-	617430	619016	789624	6	50,86,73,95,56,20,	0,139,346,1057,1274,1566,
#Deleted in new
chr19	617645	619226	chr19:617645-619226	0	-	617645	617645	8553170	5	204,99,56,114,17,	0,842,1059,1351,1564,
#Deleted in new
chr19	622534	625509	chr19:622534-625509	0	-	622534	622534	8553170	5	218,165,150,187,386,	0,286,919,2184,2589,
#Partially deleted in new
chr19	623466	630169	chr19:623466-630169	0	-	623466	630169	789624	4	137,187,89,630,	0,1252,1657,6073,
#Partially deleted in new
chr19	629635	633525	chr19:629635-633525	0	-	633341	633512	789624	3	533,105,328,	0,3198,3562,
#Deleted in new
chr19	637104	637537	chr19:637104-637537	3	-	637104	637104	8553170	1	433,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	639878	641590	chr19:639878-641590	0	+	639878	639878	8553170	1	1712,	0,
#Partially deleted in new
chr19	639894	644371	chr19:639894-644371	3	+	639925	643604	789624	3	245,104,962,	0,3340,3515,
#Partially deleted in new
chr19	639894	644371	chr19:639894-644371	1	+	639925	643612	789624	3	245,104,939,	0,3340,3538,
#Partially deleted in new
chr19	647525	663277	chr19:647525-663277	3	-	648127	663121	789624	9	752,116,94,70,63,245,64,59,231,	0,846,1356,2153,2708,4085,4707,5300,15521,
#Partially deleted in new
chr19	647525	663194	chr19:647525-663194	0	-	651888	663121	789624	9	752,116,94,70,63,305,64,59,148,	0,846,1356,2153,2708,4085,4707,5300,15521,
#Partially deleted in new
chr19	647528	661402	chr19:647528-661402	0	-	647528	647528	8553170	9	749,116,94,70,63,174,64,59,47,	0,843,1353,2150,2705,4082,4704,5297,13827,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	647529	650594	chr19:647529-650594	0	-	647529	647529	8553170	4	748,116,867,361,	0,842,1352,2704,
#Partially deleted in new
chr19	648131	663233	chr19:648131-663233	0	-	648131	663121	789624	9	146,116,94,70,63,164,64,59,187,	0,240,750,1547,2102,3560,4101,4694,14915,
#Partially deleted in new
chr19	651384	663185	chr19:651384-663185	0	-	651384	651384	8553170	4	471,64,59,139,	0,848,1441,11662,
#Partially deleted in new
chr19	652357	663171	chr19:652357-663171	0	-	652357	652357	8553170	2	527,125,	0,10689,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	663481	669500	chr19:663481-669500	3	+	663481	663481	8553170	2	1030,2289,	0,3730,
#Partially deleted in new
chr19	676364	683399	chr19:676364-683399	3	+	676423	681708	0	5	162,186,216,228,1750,	0,1427,3909,4968,5285,
#Partially deleted in new
chr19	678060	681771	chr19:678060-681771	0	+	678060	678060	8553170	4	23,216,228,122,	0,2213,3272,3589,
#Deleted in new
chr19	680033	681413	chr19:680033-681413	0	+	680317	681413	789624	2	456,81,	0,1299,
#Deleted in new
chr19	680706	683392	chr19:680706-683392	1	+	681496	681708	789624	3	173,228,1743,	0,626,943,
#Deleted in new
chr19	680714	682107	chr19:680714-682107	1	+	681496	681708	789624	3	60,228,458,	0,618,935,
#Deleted in new
chr19	680750	681771	chr19:680750-681771	0	+	681496	681771	789624	2	129,439,	0,582,
#Deleted in new
chr19	680750	682107	chr19:680750-682107	1	+	681496	681708	789624	3	62,228,458,	0,582,899,
#Partially deleted in new
chr19	685545	695498	chr19:685545-695498	3	-	685715	695430	0	5	377,264,145,157,147,	0,1379,6312,9268,9806,
#Partially deleted in new
chr19	685570	695461	chr19:685570-695461	1	-	685715	695430	789624	5	352,264,145,154,110,	0,1354,6287,9243,9781,
#Deleted in new
chr19	690352	691172	chr19:690352-691172	7	+	690352	690352	16724991	1	820,	0,
#Partially deleted in new
chr19	708938	748329	chr19:708938-748329	1	+	709146	746814	789624	8	213,52,81,131,151,22,60,2045,	0,17199,18069,18625,22156,25234,27080,37346,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	709096	735048	chr19:709096-735048	0	+	709096	709096	8553170	6	55,52,81,131,151,876,	0,17041,17911,18467,21998,25076,
#Partially deleted in new
chr19	709100	748329	chr19:709100-748329	3	+	709146	746814	789624	9	51,52,81,131,151,22,60,132,2045,	0,17037,17907,18463,21994,25072,26918,31251,37184,
#Partially deleted in new
chr19	709130	736139	chr19:709130-736139	0	+	709130	709130	8553170	7	21,52,81,131,151,22,121,	0,17007,17877,18433,21964,25042,26888,
#Partially deleted in new
chr19	719099	726173	chr19:719099-726173	0	+	719655	726173	789624	2	558,36,	0,7038,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	722503	727088	chr19:722503-727088	0	+	722503	722503	8553170	3	404,52,81,	0,3634,4504,
#Partially deleted in new
chr19	727785	748329	chr19:727785-748329	0	+	727785	727785	8553170	6	79,151,22,60,132,2045,	0,3309,6387,8233,12566,18499,
#Partially deleted in new
chr19	731091	746927	chr19:731091-746927	0	+	731091	731091	8553170	4	154,22,60,643,	0,3081,4927,15193,
#Partially deleted in new
chr19	735029	748329	chr19:735029-748329	1	+	735057	746814	789624	4	35,60,132,2045,	0,989,5322,11255,
#Partially deleted in new
chr19	735032	748329	chr19:735032-748329	1	+	735057	746814	789624	3	32,60,2045,	0,986,11252,
#Partially deleted in new
chr19	735054	748326	chr19:735054-748326	0	+	735054	735054	8553170	4	56,60,132,2042,	0,964,5297,11230,
#Partially deleted in new
chr19	751125	764318	chr19:751125-764318	3	+	756946	763590	789624	5	46,1837,131,39,818,	0,5764,8783,10499,12375,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	781001	781862	chr19:781001-781862	3	-	781001	781001	8553170	1	861,	0,
#Partially deleted in new
chr19	782754	784948	chr19:782754-784948	0	+	782754	782754	8553170	2	576,134,	0,2060,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	782795	785080	chr19:782795-785080	3	+	782795	782795	8553170	2	535,294,	0,1991,
#Partially deleted in new
chr19	797074	812327	chr19:797074-812327	1	+	797497	810826	0	15	431,31,76,173,147,171,111,175,78,149,34,93,217,78,1634,	0,2338,6486,6961,7217,7457,7754,7938,8417,9333,10794,11285,11471,13468,13619,
#Partially deleted in new
chr19	797074	812327	chr19:797074-812327	1	+	797497	810826	789624	14	431,31,76,173,411,111,175,78,149,34,93,217,78,1634,	0,2338,6486,6961,7217,7754,7938,8417,9333,10794,11285,11471,13468,13619,
#Partially deleted in new
chr19	797391	812327	chr19:797391-812327	1	+	797497	810826	789624	7	114,31,34,93,217,78,1634,	0,2021,10477,10968,11154,13151,13302,
#Partially deleted in new
chr19	797424	812312	chr19:797424-812312	3	+	797497	810826	0	14	81,31,76,173,147,171,111,175,149,34,93,217,78,1619,	0,1988,6136,6611,6867,7107,7404,7588,8983,10444,10935,11121,13118,13269,
#Partially deleted in new
chr19	797424	804582	chr19:797424-804582	0	+	797424	797424	8553170	5	81,31,76,403,51,	0,1988,6136,6611,7107,
#Partially deleted in new
chr19	797426	804634	chr19:797426-804634	0	+	803611	804634	789624	5	79,76,173,147,103,	0,6134,6609,6865,7105,
#Partially deleted in new
chr19	797427	811289	chr19:797427-811289	0	+	797427	797427	8553170	12	78,31,76,173,147,171,111,2890,93,217,78,596,	0,1985,6133,6608,6864,7104,7401,7585,10932,11118,13115,13266,
#Partially deleted in new
chr19	797451	812312	chr19:797451-812312	1	+	797497	810826	0	15	54,31,76,173,147,171,111,175,57,149,34,93,217,78,1619,	0,1961,6109,6584,6840,7080,7377,7561,8061,8956,10417,10908,11094,13091,13242,
#Partially deleted in new
chr19	797461	805017	chr19:797461-805017	0	+	797497	805017	789624	8	44,31,76,173,147,162,111,5,	0,1951,6099,6574,6830,7079,7367,7551,
#Partially deleted in new
chr19	797489	808762	chr19:797489-808762	0	+	808424	808762	789624	4	16,31,93,217,	0,1923,10870,11056,
#Partially deleted in new
chr19	798427	804083	chr19:798427-804083	0	+	798531	804083	789624	4	118,31,76,48,	0,985,5133,5608,
#Partially deleted in new
chr19	799405	812222	chr19:799405-812222	1	+	803611	810826	789624	14	38,76,173,147,171,111,175,78,149,34,93,217,78,1529,	0,4155,4630,4886,5126,5423,5607,6086,7002,8463,8954,9140,11137,11288,
#Deleted in new
chr19	803574	806045	chr19:803574-806045	0	+	803574	803574	8553170	5	62,667,111,175,533,	0,461,1254,1438,1938,
#Deleted in new
chr19	803576	808730	chr19:803576-808730	0	+	803576	808730	789624	3	60,173,81,	0,459,5073,
#Partially deleted in new
chr19	804388	810774	chr19:804388-810774	0	+	804388	808386	789624	9	50,171,111,175,149,93,217,78,81,	0,143,440,624,2019,3971,4157,6154,6305,
#Deleted in new
chr19	804622	808646	chr19:804622-808646	0	+	804622	808646	789624	7	80,111,175,78,149,73,101,	0,206,390,869,1785,3757,3923,
#Deleted in new
chr19	804857	806660	chr19:804857-806660	0	+	804857	804857	8553170	2	330,253,	0,1550,
#Deleted in new
chr19	804917	806036	chr19:804917-806036	0	+	804917	804917	8553170	3	22,175,545,	0,95,574,
#Deleted in new
chr19	804939	805001	chr19:804939-805001	3	+	804939	804939	5263520	1	62,	0,
#Partially deleted in new
chr19	805095	811016	chr19:805095-811016	0	+	805095	808386	789624	7	92,78,149,93,217,78,323,	0,396,1312,3264,3450,5447,5598,
#Deleted in new
chr19	805507	807028	chr19:805507-807028	0	+	805507	805507	8553170	2	62,621,	0,900,
#Partially deleted in new
chr19	807858	811021	chr19:807858-811021	0	+	807858	807858	8553170	4	594,217,78,328,	0,687,2684,2835,
#Partially deleted in new
chr19	812487	821952	chr19:812487-821952	3	-	812569	821559	789624	7	1408,316,196,142,186,101,38,	0,1946,2398,2698,3178,8997,9427,
#Partially deleted in new
chr19	812487	821977	chr19:812487-821977	1	-	812569	821559	789624	8	1408,174,58,196,142,186,101,63,	0,1946,2204,2398,2698,3178,8997,9427,
#Deleted in new
chr19	813583	813653	chr19:813583-813653	3	+	813583	813583	5263520	1	70,	0,
#Deleted in new
chr19	813755	814911	chr19:813755-814911	0	-	813755	814911	789624	4	140,138,58,26,	0,678,936,1130,
#Partially deleted in new
chr19	815202	821955	chr19:815202-821955	0	-	815202	821559	789624	3	125,186,471,	0,463,6282,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	825096	832017	chr19:825096-832017	1	+	828357	830986	789624	4	101,157,145,1310,	0,3133,4465,5611,
#Partially deleted in new
chr19	827835	832018	chr19:827835-832018	3	+	827846	831877	0	5	69,157,145,234,303,	0,394,1726,2872,3880,
#Partially deleted in new
chr19	840959	848175	chr19:840959-848175	3	+	841008	847969	0	5	110,166,142,231,377,	0,2501,2933,5187,6839,
#Partially deleted in new
chr19	843340	848175	chr19:843340-848175	1	+	843522	847969	789624	4	286,142,231,377,	0,552,2806,4458,
#Partially deleted in new
chr19	851013	856247	chr19:851013-856247	3	+	852328	856164	0	6	21,187,157,142,231,290,	0,1195,1862,2248,4550,4944,
#Partially deleted in new
chr19	852290	856242	chr19:852290-856242	1	+	852328	856164	0	5	105,157,142,231,285,	0,585,971,3273,3667,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	859642	863630	chr19:859642-863630	3	+	859689	863238	0	5	102,157,145,258,539,	0,974,1218,2056,3449,
#Partially deleted in new
chr19	859663	863238	chr19:859663-863238	1	+	859689	863238	789624	5	102,157,145,258,147,	0,953,1197,2035,3428,
#Partially deleted in new
chr19	867629	893218	chr19:867629-893218	1	-	868372	891131	789624	15	870,84,217,193,134,211,207,212,156,106,432,170,108,187,133,	0,1233,3407,4296,5819,7614,9344,12307,13929,17273,18140,22008,22507,23333,25456,
#Partially deleted in new
chr19	867852	893193	chr19:867852-893193	1	-	868372	891131	789624	16	647,84,217,57,193,134,211,207,212,156,106,432,170,108,187,108,	0,1010,3184,3753,4073,5596,7391,9121,12084,13706,17050,17917,21785,22284,23110,25233,
#Partially deleted in new
chr19	867962	891131	chr19:867962-891131	1	-	868100	891131	789624	15	289,84,84,217,193,134,211,207,212,156,106,432,170,108,169,	0,453,900,3074,3963,5486,7281,9011,11974,13596,16940,17807,21675,22174,23000,
#Partially deleted in new
chr19	867962	885909	chr19:867962-885909	0	-	868449	885909	789624	10	537,84,217,134,211,207,212,156,106,140,	0,900,3074,5486,7281,9011,11974,13596,16940,17807,
#Partially deleted in new
chr19	867962	871066	chr19:867962-871066	0	-	868216	871066	789624	4	289,89,84,30,	0,448,900,3074,
#Partially deleted in new
chr19	867963	893200	chr19:867963-893200	1	-	868372	891131	789624	7	536,29,54,170,108,187,115,	0,899,18184,21674,22173,22999,25122,
#Partially deleted in new
chr19	867963	893218	chr19:867963-893218	3	-	868100	891131	789624	16	288,84,84,217,193,134,211,207,212,156,106,432,170,108,187,133,	0,452,899,3073,3962,5485,7280,9010,11973,13595,16939,17806,21674,22173,22999,25122,
#Partially deleted in new
chr19	867963	893216	chr19:867963-893216	0	-	872922	891131	789624	16	536,84,217,193,97,134,211,207,212,156,106,432,170,108,187,131,	0,899,3073,3962,4949,5485,7280,9010,11973,13595,16939,17806,21674,22173,22999,25122,
#Partially deleted in new
chr19	867971	891148	chr19:867971-891148	1	-	868372	891131	789624	5	444,170,170,108,186,	0,18060,21666,22165,22991,
#Partially deleted in new
chr19	867971	891148	chr19:867971-891148	1	-	868100	891131	789624	2	525,29,	0,23148,
#Partially deleted in new
chr19	873535	891148	chr19:873535-891148	0	-	873535	891131	789624	9	47,211,207,212,156,106,170,108,186,	0,1708,3438,6401,8023,11367,16102,16601,17427,
#Partially deleted in new
chr19	873535	891148	chr19:873535-891148	0	-	873535	891131	789624	9	47,211,212,156,106,432,170,108,186,	0,1708,6401,8023,11367,12234,16102,16601,17427,
#Partially deleted in new
chr19	873535	891148	chr19:873535-891148	0	-	873535	891131	789624	5	47,88,170,108,186,	0,1708,16102,16601,17427,
#Partially deleted in new
chr19	885821	893158	chr19:885821-893158	0	-	890367	891131	789624	4	380,287,187,73,	0,4315,5141,7264,
#Deleted in new
chr19	890983	892815	chr19:890983-892815	0	-	890983	891131	789624	2	166,469,	0,1363,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	893483	893590	chr19:893483-893590	3	+	893483	893483	789624	1	107,	0,
#Partially deleted in new
chr19	896502	913231	chr19:896502-913231	3	-	897436	913157	789624	8	1038,56,86,86,124,125,155,145,	0,2937,3098,3558,4326,4919,5473,16584,
#Partially deleted in new
chr19	896502	913245	chr19:896502-913245	0	-	900884	913157	789624	7	1038,56,86,86,124,155,159,	0,2937,3098,3558,4326,5473,16584,
#Partially deleted in new
chr19	896503	913245	chr19:896503-913245	1	-	897436	913157	789624	8	1037,56,86,86,124,125,92,159,	0,2936,3097,3557,4325,4918,5472,16583,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	897518	902410	chr19:897518-902410	0	-	897518	897518	8553170	8	22,56,86,86,124,125,155,169,	0,1921,2082,2542,3310,3903,4457,4723,
#Deleted in new
chr19	899643	901236	chr19:899643-901236	0	-	899643	899643	8553170	3	43,86,408,	0,417,1185,
#Partially deleted in new
chr19	901490	913151	chr19:901490-913151	0	-	901490	901490	8553170	2	640,65,	0,11596,
#Deleted in new
chr19	917286	919536	chr19:917286-919536	0	+	917502	919536	789624	2	460,47,	0,2203,
#Deleted in new
chr19	917341	921015	chr19:917341-921015	3	+	917502	920748	789624	5	405,125,136,233,726,	0,1202,2148,2532,2948,
#Deleted in new
chr19	917502	920748	chr19:917502-920748	1	+	917502	920465	789624	4	244,125,136,459,	0,1041,1987,2787,
#Deleted in new
chr19	925780	929498	chr19:925780-929498	0	+	925780	925780	8553170	2	140,237,	0,3481,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	926036	975934	chr19:926036-975934	3	+	929528	972065	0	9	23,635,325,73,184,248,297,99,4057,	0,3225,6381,34055,38211,38796,40535,42368,45841,
#Deleted in new
chr19	928258	928817	chr19:928258-928817	3	-	928258	928258	8553170	2	230,98,	0,461,
#Deleted in new
chr19	928677	929357	chr19:928677-929357	0	+	928677	928677	8553170	2	468,96,	0,584,
#Partially deleted in new
chr19	932508	972055	chr19:932508-972055	0	+	932508	972055	789624	6	234,73,184,248,99,178,	0,27583,31739,32324,35896,39369,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	932564	964366	chr19:932564-964366	0	+	932564	961799	789624	4	178,73,179,119,	0,27527,29197,31683,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	956484	958149	chr19:956484-958149	3	+	956484	956484	8553170	2	233,108,	0,1557,
#Deleted in new
chr19	964288	965270	chr19:964288-965270	0	+	964288	964288	8553170	2	143,438,	0,544,
#Partially deleted in new
chr19	966786	968795	chr19:966786-968795	0	+	966786	966786	8553170	2	82,391,	0,1618,
#Partially deleted in new
chr19	984270	994570	chr19:984270-994570	3	+	984353	994344	789624	10	293,111,134,142,144,65,125,167,69,358,	0,1594,5491,5952,6581,6810,6956,7684,9749,9942,
#Partially deleted in new
chr19	984331	994557	chr19:984331-994557	1	+	984353	994344	789624	9	232,111,134,142,144,65,125,167,345,	0,1533,5430,5891,6520,6749,6895,7623,9881,
#Partially deleted in new
chr19	984340	990258	chr19:984340-990258	0	+	984340	984340	8553170	3	223,111,497,	0,1524,5421,
#Partially deleted in new
chr19	984344	991286	chr19:984344-991286	0	+	984353	989899	789624	7	219,111,342,142,144,65,60,	0,1520,5417,5878,6507,6736,6882,
#Partially deleted in new
chr19	984357	994556	chr19:984357-994556	0	+	984357	994344	789624	10	206,111,134,142,144,59,125,167,69,344,	0,1507,5404,5865,6494,6723,6869,7597,9662,9855,
#Partially deleted in new
chr19	984357	994554	chr19:984357-994554	0	+	984357	991237	789624	10	206,111,134,142,144,65,118,167,69,342,	0,1507,5404,5865,6494,6723,6876,7597,9662,9855,
#Partially deleted in new
chr19	984357	994557	chr19:984357-994557	0	+	984357	994344	789624	9	206,134,142,144,65,125,167,69,345,	0,5404,5865,6494,6723,6869,7597,9662,9855,
#Partially deleted in new
chr19	984377	998438	chr19:984377-998438	0	+	984377	989899	789624	4	186,111,154,126,	0,1487,5384,13935,
#Deleted in new
chr19	990646	991334	chr19:990646-991334	0	+	990646	990646	8553170	2	499,108,	0,580,
#Deleted in new
chr19	991133	994557	chr19:991133-994557	0	+	991133	992002	789624	5	12,125,127,69,345,	0,93,861,2886,3079,
#Deleted in new
chr19	994013	994554	chr19:994013-994554	0	+	994013	994013	8553170	2	75,342,	0,199,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	999795	1002757	chr19:999795-1002757	3	-	999795	999795	8553170	3	372,140,129,	0,2226,2833,
#Partially deleted in new
chr19	1000418	1009732	chr19:1000418-1009732	3	+	1000437	1009602	789624	9	445,593,1033,146,116,152,165,71,560,	0,2711,4102,7209,7437,7721,8199,8438,8754,
#Partially deleted in new
chr19	1004534	1005279	chr19:1004534-1005279	0	+	1004534	1004534	8553170	2	50,478,	0,267,
#Partially deleted in new
chr19	1009647	1021179	chr19:1009647-1021179	1	-	1010349	1020996	789624	11	1248,100,133,84,58,101,123,111,100,282,408,	0,1448,1719,1932,2093,2244,2418,2815,3593,4544,11124,
#Partially deleted in new
chr19	1009647	1021179	chr19:1009647-1021179	0	-	1011091	1020996	789624	11	1248,105,133,84,58,101,123,111,100,282,408,	0,1343,1719,1932,2093,2244,2418,2815,3593,4544,11124,
#Partially deleted in new
chr19	1009649	1017420	chr19:1009649-1017420	1	-	1010885	1017413	789624	10	1246,100,246,58,101,123,111,100,282,142,	0,1446,1717,2091,2242,2416,2813,3591,4542,7629,
#Partially deleted in new
chr19	1009650	1021115	chr19:1009650-1021115	3	-	1010885	1020996	789624	10	1245,133,84,58,101,123,111,100,282,344,	0,1716,1929,2090,2241,2415,2812,3590,4541,11121,
#Deleted in new
chr19	1009651	1012289	chr19:1009651-1012289	0	-	1009651	1009651	8553170	6	210,719,404,219,101,224,	0,525,1444,1928,2240,2414,
#Partially deleted in new
chr19	1009652	1020851	chr19:1009652-1020851	0	-	1009652	1009652	8553170	10	1243,105,133,84,58,101,508,100,126,80,	0,1338,1714,1927,2088,2239,2413,3588,4539,11119,
#Deleted in new
chr19	1009719	1011356	chr19:1009719-1011356	0	-	1009719	1009719	8553170	1	1637,	0,
#Deleted in new
chr19	1010220	1010907	chr19:1010220-1010907	3	+	1010220	1010220	8553170	2	391,49,	0,638,
#Deleted in new
chr19	1010694	1011992	chr19:1010694-1011992	0	-	1010694	1011992	789624	6	201,100,133,33,58,101,	0,401,672,885,1046,1197,
#Deleted in new
chr19	1011851	1013342	chr19:1011851-1013342	0	-	1011851	1011851	8553170	4	141,123,111,102,	0,214,611,1389,
#Deleted in new
chr19	1011865	1014247	chr19:1011865-1014247	0	-	1011865	1011865	8553170	4	127,508,100,56,	0,200,1375,2326,
#Deleted in new
chr19	1012112	1014304	chr19:1012112-1014304	0	-	1012112	1014304	789624	4	76,111,118,113,	0,350,1128,2079,
#Deleted in new
chr19	1012540	1013639	chr19:1012540-1013639	0	-	1012540	1012540	8553170	2	33,399,	0,700,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	1026580	1039068	chr19:1026580-1039068	3	+	1026661	1037900	0	7	144,122,67,138,117,147,1444,	0,4490,5811,5978,9549,9835,11044,
#Partially deleted in new
chr19	1026585	1032695	chr19:1026585-1032695	0	+	1032395	1032695	789624	5	139,98,122,67,137,	0,391,4485,5806,5973,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	1026609	1039068	chr19:1026609-1039068	1	+	1026661	1037900	0	6	115,122,67,138,147,1444,	0,4461,5782,5949,9806,11015,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	1026617	1039068	chr19:1026617-1039068	1	+	1026661	1037900	789624	7	107,122,67,105,117,147,1444,	0,4453,5774,5941,9512,9798,11007,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	1026628	1039068	chr19:1026628-1039068	1	+	1026661	1037900	789624	7	96,122,67,138,180,147,1444,	0,4442,5763,5930,9438,9787,10996,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	1026628	1037632	chr19:1026628-1037632	0	+	1026661	1032753	789624	5	96,122,67,363,83,	0,4442,5763,5930,10921,
#Partially deleted in new
chr19	1026661	1036472	chr19:1026661-1036472	0	+	1026661	1036472	789624	6	63,122,67,111,117,57,	0,4409,5730,5897,9468,9754,
#Partially deleted in new
chr19	1026690	1036677	chr19:1026690-1036677	0	+	1032395	1036677	789624	5	34,122,67,138,262,	0,4380,5701,5868,9725,
#Partially deleted in new
chr19	1026690	1036688	chr19:1026690-1036688	0	+	1026690	1036688	789624	2	34,273,	0,9725,
#Partially deleted in new
chr19	1030942	1037733	chr19:1030942-1037733	0	+	1032395	1037733	789624	6	250,67,138,117,147,109,	0,1449,1616,5187,5473,6682,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	1036798	1039064	chr19:1036798-1039064	0	+	1036798	1036798	8553170	1	2266,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	1038726	1039064	chr19:1038726-1039064	3	-	1038726	1038726	8553170	1	338,	0,
#Deleted in new
chr19	1040100	1041553	chr19:1040100-1041553	0	+	1041361	1041553	789624	3	96,203,44,	0,1124,1409,
#Partially deleted in new
chr19	1040102	1065569	chr19:1040102-1065569	3	+	1041361	1065425	789624	47	94,203,94,142,113,83,81,211,140,117,168,230,177,223,222,202,111,172,132,140,138,185,73,203,49,105,149,125,99,255,33,178,170,178,116,145,124,130,121,63,107,142,135,104,93,241,300,	0,1122,1407,1728,1961,2212,2643,2938,3231,3622,4474,4899,6127,6699,7054,7350,8792,9163,10818,11052,11346,11839,12111,13226,13685,13903,14090,14467,14677,14994,15804,15963,16227,16804,17211,17812,18043,18515,18717,18920,21679,22069,23441,23657,24058,24828,25167,
#Deleted in new
chr19	1040102	1042744	chr19:1040102-1042744	0	+	1040102	1040102	8553170	6	94,203,94,142,113,430,	0,1122,1407,1728,1961,2212,
#Deleted in new
chr19	1040115	1041682	chr19:1040115-1041682	0	+	1040115	1040115	8553170	2	81,458,	0,1109,
#Deleted in new
chr19	1040117	1042465	chr19:1040117-1042465	0	+	1040117	1040117	8553170	4	79,203,667,151,	0,1107,1392,2197,
#Deleted in new
chr19	1040119	1042391	chr19:1040119-1042391	0	+	1041361	1042391	789624	6	77,73,94,142,113,77,	0,1235,1390,1711,1944,2195,
#Deleted in new
chr19	1041201	1042176	chr19:1041201-1042176	0	+	1041361	1042176	789624	4	226,88,142,113,	0,314,629,862,
#Deleted in new
chr19	1041204	1042104	chr19:1041204-1042104	0	+	1041204	1041204	8553170	3	223,94,274,	0,305,626,
#Partially deleted in new
chr19	1041245	1065572	chr19:1041245-1065572	1	+	1041361	1065425	789624	46	182,94,142,113,83,81,211,140,117,168,230,177,223,222,202,111,172,132,140,138,185,73,203,49,105,149,125,99,255,33,178,170,178,116,145,124,130,121,63,107,142,135,104,93,241,303,	0,264,585,818,1069,1500,1795,2088,2479,3331,3756,4984,5556,5911,6207,7649,8020,9675,9909,10203,10696,10968,12083,12542,12760,12947,13324,13534,13851,14661,14820,15084,15661,16068,16669,16900,17372,17574,17777,20536,20926,22298,22514,22915,23685,24024,
#Partially deleted in new
chr19	1042624	1065572	chr19:1042624-1065572	1	+	1042661	1065425	789624	41	202,211,140,117,168,230,177,223,222,202,111,172,132,140,138,185,73,203,49,105,149,125,99,255,33,178,170,178,116,145,124,130,121,63,107,142,135,104,93,241,303,	0,416,709,1100,1952,2377,3605,4177,4532,4828,6270,6641,8296,8530,8824,9317,9589,10704,11163,11381,11568,11945,12155,12472,13282,13441,13705,14282,14689,15290,15521,15993,16195,16398,19157,19547,20919,21135,21536,22306,22645,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	1045531	1047554	chr19:1045531-1047554	0	+	1045531	1045531	8553170	4	88,175,222,102,	0,698,1625,1921,
#Partially deleted in new
chr19	1054075	1055939	chr19:1054075-1055939	0	+	1054075	1054782	789624	5	35,149,99,255,33,	0,117,704,1021,1831,
#Partially deleted in new
chr19	1056927	1058740	chr19:1056927-1058740	0	+	1056927	1058161	789624	4	157,116,124,123,	0,386,1218,1690,
#Partially deleted in new
chr19	1056933	1065569	chr19:1056933-1065569	0	+	1056933	1065425	789624	14	151,116,91,124,130,121,63,107,142,135,104,93,241,300,	0,380,1035,1212,1684,1886,2089,4848,5238,6610,6826,7227,7997,8336,
#Partially deleted in new
chr19	1057039	1059263	chr19:1057039-1059263	0	+	1057039	1057039	8553170	6	390,145,124,130,121,241,	0,875,1106,1578,1780,1983,
#Partially deleted in new
chr19	1062178	1065458	chr19:1062178-1065458	0	+	1062178	1065425	789624	6	135,135,104,93,241,168,	0,1365,1581,1982,2752,3112,
#Deleted in new
chr19	1062260	1063945	chr19:1062260-1063945	0	+	1062260	1062260	8553170	3	53,135,186,	0,1283,1499,
#Partially deleted in new
chr19	1064051	1065572	chr19:1064051-1065572	0	+	1064051	1064051	8553170	3	202,241,282,	0,879,1239,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	1064658	1065328	chr19:1064658-1065328	0	+	1064658	1064658	8553170	3	89,241,59,	0,272,611,
#Partially deleted in new
chr19	1065922	1086628	chr19:1065922-1086628	1	+	1066025	1086006	0	23	241,331,144,85,73,67,138,65,111,81,189,138,191,125,84,105,173,189,138,227,211,109,969,	0,2491,7226,7583,7751,8025,8181,8420,8691,8876,11934,13780,14005,14332,14541,14759,14969,15627,15901,16917,17220,18315,19737,
#Partially deleted in new
chr19	1066508	1073223	chr19:1066508-1073223	0	+	1066536	1073223	789624	3	133,331,75,	0,1905,6640,
#Partially deleted in new
chr19	1067165	1086628	chr19:1067165-1086628	3	+	1067405	1086006	0	23	330,331,144,85,73,67,138,65,111,81,189,138,191,125,84,105,173,189,138,227,211,109,969,	0,1248,5983,6340,6508,6782,6938,7177,7448,7633,10691,12537,12762,13089,13298,13516,13726,14384,14658,15674,15977,17072,18494,
#Partially deleted in new
chr19	1067316	1086628	chr19:1067316-1086628	0	+	1067405	1073241	789624	21	179,144,85,73,67,138,65,111,81,189,138,191,293,105,173,189,138,227,211,109,969,	0,5832,6189,6357,6631,6787,7026,7297,7482,10540,12386,12611,12938,13365,13575,14233,14507,15523,15826,16921,18343,
#Partially deleted in new
chr19	1067318	1080961	chr19:1067318-1080961	0	+	1067318	1067318	8553170	4	177,293,105,70,	0,12936,13363,13573,
#Partially deleted in new
chr19	1067326	1086626	chr19:1067326-1086626	1	+	1067405	1086006	789624	23	169,412,144,85,73,67,138,65,111,81,189,138,191,125,84,105,173,189,138,227,211,109,967,	0,1006,5822,6179,6347,6621,6777,7016,7287,7472,10530,12376,12601,12928,13137,13355,13565,14223,14497,15513,15816,16911,18333,
#Partially deleted in new
chr19	1067497	1086628	chr19:1067497-1086628	1	+	1067572	1086006	789624	23	177,331,144,85,73,67,138,65,111,81,189,138,191,125,84,105,173,189,138,227,211,109,969,	0,916,5651,6008,6176,6450,6606,6845,7116,7301,10359,12205,12430,12757,12966,13184,13394,14052,14326,15342,15645,16740,18162,
#Partially deleted in new
chr19	1071220	1086628	chr19:1071220-1086628	1	+	1071288	1086006	789624	22	138,144,85,73,67,138,65,111,81,189,138,191,125,84,105,173,189,138,227,211,109,969,	0,1928,2285,2453,2727,2883,3122,3393,3578,6636,8482,8707,9034,9243,9461,9671,10329,10603,11619,11922,13017,14439,
#Partially deleted in new
chr19	1071512	1073549	chr19:1071512-1073549	0	+	1071512	1071512	8553170	3	254,144,44,	0,1636,1993,
#Deleted in new
chr19	1073582	1074724	chr19:1073582-1074724	0	+	1073582	1073582	8553170	5	164,67,138,65,111,	0,365,521,760,1031,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	1077486	1086628	chr19:1077486-1086628	1	+	1077766	1086006	789624	13	559,138,191,125,84,105,173,189,138,227,211,109,969,	0,2216,2441,2768,2977,3195,3405,4063,4337,5353,5656,6751,8173,
#Deleted in new
chr19	1081414	1082956	chr19:1081414-1082956	0	+	1081414	1081414	8553170	3	324,138,117,	0,409,1425,
#Deleted in new
chr19	1082520	1083329	chr19:1082520-1083329	0	+	1082520	1082520	8553170	3	137,227,187,	0,319,622,
#Partially deleted in new
chr19	1082783	1085996	chr19:1082783-1085996	0	+	1082783	1082783	8553170	4	283,211,109,337,	0,359,1454,2876,
#Partially deleted in new
chr19	1082840	1086600	chr19:1082840-1086600	0	+	1082840	1082840	8553170	3	513,109,941,	0,1397,2819,
#Partially deleted in new
chr19	1082938	1086628	chr19:1082938-1086628	0	+	1082938	1084268	789624	4	128,78,109,969,	0,337,1299,2721,
#Partially deleted in new
chr19	1086578	1095354	chr19:1086578-1095354	1	-	1089485	1095315	0	8	410,80,79,59,81,116,175,96,	0,2893,3305,3508,4329,5213,7325,8680,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	1086578	1095357	chr19:1086578-1095357	3	-	1089485	1095315	0	8	2142,80,79,59,81,116,175,99,	0,2893,3305,3508,4329,5213,7325,8680,
#Partially deleted in new
chr19	1087644	1095380	chr19:1087644-1095380	1	-	1089485	1095315	0	8	1037,80,79,59,81,116,175,122,	0,1827,2239,2442,3263,4147,6259,7614,
#Partially deleted in new
chr19	1088147	1095375	chr19:1088147-1095375	0	-	1091808	1095315	789624	7	573,80,79,59,81,116,117,	0,1324,1736,1939,2760,3644,7111,
#Partially deleted in new
chr19	1088147	1095336	chr19:1088147-1095336	0	-	1091905	1095315	789624	8	573,80,79,59,81,116,148,78,	0,1324,1736,1939,2760,3644,5608,7111,
#Partially deleted in new
chr19	1088162	1095374	chr19:1088162-1095374	0	-	1089525	1095315	789624	8	558,102,79,59,81,116,175,116,	0,1309,1721,1924,2745,3629,5741,7096,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	1088166	1095375	chr19:1088166-1095375	0	-	1088166	1088166	8553170	7	554,80,79,59,81,116,1472,	0,1305,1717,1920,2741,3625,5737,
#Partially deleted in new
chr19	1088387	1095366	chr19:1088387-1095366	1	-	1088713	1095315	789624	7	333,62,79,59,116,175,108,	0,1102,1496,1699,3404,5516,6871,
#Deleted in new
chr19	1088423	1089930	chr19:1088423-1089930	0	-	1088423	1088423	8553170	2	297,459,	0,1048,
#Partially deleted in new
chr19	1088644	1095261	chr19:1088644-1095261	0	-	1089485	1095261	789624	7	69,80,79,59,81,116,3,	0,827,1239,1442,2263,3147,6614,
#Partially deleted in new
chr19	1089896	1095354	chr19:1089896-1095354	0	-	1089896	1089896	8553170	6	66,55,81,116,175,96,	0,190,1011,1895,4007,5362,
#Partially deleted in new
chr19	1091500	1095361	chr19:1091500-1095361	0	-	1091500	1091500	8553170	3	407,175,103,	0,2403,3758,
#Partially deleted in new
chr19	1093729	1095349	chr19:1093729-1095349	0	-	1093729	1093729	8553170	2	349,91,	0,1529,
#Deleted in new
chr19	1103925	1106787	chr19:1103925-1106787	1	+	1104043	1106572	789624	8	202,95,37,105,152,25,60,248,	0,1260,1440,1480,1732,2316,2474,2614,
#Deleted in new
chr19	1103936	1106790	chr19:1103936-1106790	3	+	1104043	1106572	0	7	191,95,145,152,25,60,251,	0,1249,1429,1721,2305,2463,2603,
#Deleted in new
chr19	1104007	1106779	chr19:1104007-1106779	1	+	1104043	1106546	789624	6	120,95,145,152,60,240,	0,1178,1358,1650,2392,2532,
#Deleted in new
chr19	1104051	1106779	chr19:1104051-1106779	1	+	1104124	1106572	0	7	76,95,145,152,25,60,240,	0,1134,1314,1606,2190,2348,2488,
#Deleted in new
chr19	1104066	1106443	chr19:1104066-1106443	0	+	1104124	1106443	789624	6	61,95,145,152,86,44,	0,1119,1299,1591,2114,2333,
#Deleted in new
chr19	1104072	1106788	chr19:1104072-1106788	1	+	1104124	1106766	789624	7	55,95,145,152,25,82,249,	0,1113,1293,1585,2169,2305,2467,
#Deleted in new
chr19	1104414	1105761	chr19:1104414-1105761	0	+	1104734	1105761	789624	4	515,95,145,104,	0,771,951,1243,
#Deleted in new
chr19	1104649	1106787	chr19:1104649-1106787	1	+	1104734	1106572	789624	8	280,95,37,105,152,25,60,248,	0,536,716,756,1008,1592,1750,1890,
#Deleted in new
chr19	1104705	1105483	chr19:1104705-1105483	0	+	1104734	1105483	789624	3	224,89,118,	0,480,660,
#Deleted in new
chr19	1105151	1106564	chr19:1105151-1106564	0	+	1105221	1106564	789624	6	129,145,152,25,60,25,	0,214,506,1090,1248,1388,
#Deleted in new
chr19	1105155	1106791	chr19:1105155-1106791	0	+	1105155	1105155	8553170	5	125,145,602,60,252,	0,210,509,1244,1384,
#Deleted in new
chr19	1105252	1105673	chr19:1105252-1105673	0	+	1105252	1105252	8553170	2	258,16,	0,405,
#Deleted in new
chr19	1105453	1106779	chr19:1105453-1106779	0	+	1105453	1106779	789624	5	57,152,25,60,207,	0,204,788,946,1119,
#Partially deleted in new
chr19	1107635	1174283	chr19:1107635-1174283	3	-	1108219	1154276	789624	32	1069,191,77,132,93,95,144,75,109,72,113,136,132,170,192,83,98,177,154,106,118,144,91,134,152,106,81,162,112,74,219,112,	0,1143,1499,1656,1870,2047,3109,3383,3870,4360,4553,4766,5182,5899,6595,8385,9193,9687,11375,11880,12270,14503,14832,15022,15258,15898,16306,19968,39673,41733,46548,66536,
#Partially deleted in new
chr19	1107636	1132221	chr19:1107636-1132221	1	-	1108219	1132197	789624	29	1068,191,77,132,93,95,144,75,109,72,113,136,132,170,192,83,98,177,154,106,118,144,91,134,152,106,81,162,132,	0,1142,1498,1655,1869,2046,3108,3382,3869,4359,4552,4765,5181,5898,6594,8384,9192,9686,11374,11879,12269,14502,14831,15021,15257,15897,16305,19967,24453,
#Partially deleted in new
chr19	1107640	1174256	chr19:1107640-1174256	1	-	1108219	1154276	789624	32	1064,191,77,132,93,95,144,75,109,72,113,136,132,170,192,83,98,147,154,106,118,144,91,134,152,106,81,162,112,74,219,85,	0,1138,1494,1651,1865,2042,3104,3378,3865,4355,4548,4761,5177,5894,6590,8380,9188,9682,11370,11875,12265,14498,14827,15017,15253,15893,16301,19963,39668,41728,46543,66531,
#Deleted in new
chr19	1108564	1111605	chr19:1108564-1111605	0	-	1108564	1108564	8553170	7	140,191,464,95,144,75,100,	0,214,570,1118,2180,2454,2941,
#Deleted in new
chr19	1109500	1111062	chr19:1109500-1111062	0	-	1109500	1109500	8553170	3	277,144,44,	0,1244,1518,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	1115355	1132221	chr19:1115355-1132221	0	-	1115355	1115355	8553170	14	748,98,177,154,106,118,144,91,134,152,106,81,162,132,	0,1473,1967,3655,4160,4550,6783,7112,7302,7538,8178,8586,12248,16734,
#Partially deleted in new
chr19	1117395	1120128	chr19:1117395-1120128	0	-	1117395	1117395	8553170	4	104,154,106,223,	0,1615,2120,2510,
#Partially deleted in new
chr19	1127659	1155136	chr19:1127659-1155136	0	-	1127659	1154276	789624	5	106,112,74,219,51,	0,19649,21709,26524,27426,
#Partially deleted in new
chr19	1127660	1173774	chr19:1127660-1173774	0	-	1127660	1154276	789624	5	105,112,74,219,51,	0,19648,21708,26523,46063,
#Partially deleted in new
chr19	1127709	1169146	chr19:1127709-1169146	0	-	1127709	1154276	789624	5	56,112,74,219,453,	0,19599,21659,26474,40984,
#Partially deleted in new
chr19	1177557	1219386	chr19:1177557-1219386	0	+	1218498	1219386	789624	5	254,94,251,84,63,	0,1682,11851,40859,41766,
#Partially deleted in new
chr19	1203208	1203842	chr19:1203208-1203842	7	+	1203208	1203208	16724991	1	634,	0,
#Partially deleted in new
chr19	1205804	1228094	chr19:1205804-1228094	1	+	1206913	1226647	789624	13	285,965,84,90,133,137,128,58,188,113,33,61,502,	0,434,12612,13519,14568,14776,15408,16144,17180,20649,20763,20798,21788,
#Partially deleted in new
chr19	1206463	1228435	chr19:1206463-1228435	3	+	1206913	1226647	0	10	740,84,90,133,137,128,58,188,210,843,	0,11953,12860,13909,14117,14749,15485,16521,19990,21129,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	1206815	1219357	chr19:1206815-1219357	0	+	1206913	1216283	789624	4	388,131,84,34,	0,9452,11601,12508,
#Partially deleted in new
chr19	1206823	1228012	chr19:1206823-1228012	0	+	1206823	1206823	8553170	8	380,84,90,133,137,794,188,1559,	0,11593,12500,13549,13757,14389,16161,19630,
#Partially deleted in new
chr19	1206868	1220617	chr19:1206868-1220617	0	+	1206913	1220617	789624	3	335,133,37,	0,13504,13712,
#Partially deleted in new
chr19	1207090	1221958	chr19:1207090-1221958	0	+	1207090	1207090	8553170	6	113,84,90,345,128,10,	0,11326,12233,13282,14122,14858,
#Deleted in new
chr19	1220012	1223104	chr19:1220012-1223104	0	+	1220012	1220012	8553170	4	705,128,58,120,	0,1200,1936,2972,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	1223147	1228095	chr19:1223147-1228095	0	+	1223147	1223744	789624	3	25,3026,503,	0,490,4445,
#Deleted in new
chr19	1228286	1238027	chr19:1228286-1238027	3	-	1230892	1236100	789624	9	2989,211,141,172,145,65,140,126,272,	0,5139,5904,6284,6714,7214,7492,7709,9469,
#Deleted in new
chr19	1228286	1238027	chr19:1228286-1238027	0	-	1235349	1236100	8553170	11	1856,175,211,141,172,145,54,65,140,126,272,	0,2814,5139,5904,6284,6714,7050,7214,7492,7709,9469,
#Deleted in new
chr19	1228286	1238027	chr19:1228286-1238027	1	-	1229178	1236100	8553170	10	1856,175,211,141,172,145,65,140,126,272,	0,2814,5139,5904,6284,6714,7214,7492,7709,9469,
#Deleted in new
chr19	1229178	1237991	chr19:1229178-1237991	1	-	1229178	1236082	789624	10	964,175,211,141,257,138,65,140,126,236,	0,1922,4247,5012,5392,5829,6322,6600,6817,8577,
#Deleted in new
chr19	1229947	1235085	chr19:1229947-1235085	0	-	1234272	1235085	789624	6	190,175,211,100,172,85,	0,1153,3478,4243,4623,5053,
#Deleted in new
chr19	1234573	1237846	chr19:1234573-1237846	0	-	1234573	1234573	8553170	6	169,342,65,136,126,91,	0,427,927,1205,1422,3182,
#Deleted in new
chr19	1234646	1237820	chr19:1234646-1237820	0	-	1234646	1234646	8553170	6	96,342,65,140,126,65,	0,354,854,1132,1349,3109,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	1238178	1239522	chr19:1238178-1239522	3	+	1238178	1238178	8553170	3	48,637,159,	0,225,1185,
#Partially deleted in new
chr19	1241745	1244825	chr19:1241745-1244825	3	+	1241850	1244437	789624	5	246,154,89,126,89,	0,710,2351,2569,2991,
#Partially deleted in new
chr19	1241749	1244826	chr19:1241749-1244826	1	+	1241850	1244437	789624	4	242,154,89,512,	0,706,2347,2565,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	1241767	1243354	chr19:1241767-1243354	0	+	1241767	1241767	8553170	1	1587,	0,
#Partially deleted in new
chr19	1241769	1244825	chr19:1241769-1244825	0	+	1241769	1241769	8553170	4	840,89,126,89,	0,2327,2545,2967,
#Partially deleted in new
chr19	1241816	1244825	chr19:1241816-1244825	0	+	1241816	1241816	8553170	3	793,89,511,	0,2280,2498,
#Partially deleted in new
chr19	1241819	1244786	chr19:1241819-1244786	1	+	1241850	1244437	789624	5	172,154,89,126,96,	0,636,2277,2495,2871,
#Partially deleted in new
chr19	1242504	1244825	chr19:1242504-1244825	0	+	1242504	1244423	789624	4	105,89,122,89,	0,1592,1814,2232,
#Deleted in new
chr19	1244056	1244825	chr19:1244056-1244825	0	+	1244056	1244056	8553170	2	129,511,	0,258,
#Deleted in new
chr19	1244057	1244825	chr19:1244057-1244825	0	+	1244057	1244057	8553170	3	128,126,89,	0,257,679,
#Partially deleted in new
chr19	1248552	1259140	chr19:1248552-1259140	3	+	1250296	1257272	789624	8	108,640,88,63,312,160,273,2146,	0,1337,3009,3286,5614,6349,6869,8442,
#Deleted in new
chr19	1248552	1254430	chr19:1248552-1254430	0	+	1250296	1254430	789624	5	108,640,88,63,264,	0,1337,3009,3286,5614,
#Partially deleted in new
chr19	1249887	1258699	chr19:1249887-1258699	1	+	1250296	1257272	789624	7	642,88,63,312,160,273,1705,	0,1674,1951,4279,5014,5534,7107,
#Deleted in new
chr19	1251260	1254237	chr19:1251260-1254237	0	+	1251260	1251260	8553170	3	389,63,71,	0,578,2906,
#Deleted in new
chr19	1251561	1254302	chr19:1251561-1254302	0	+	1251561	1254302	789624	4	88,63,129,136,	0,277,2392,2605,
#Deleted in new
chr19	1253683	1254303	chr19:1253683-1254303	0	+	1253683	1253683	8553170	2	399,137,	0,483,
#Partially deleted in new
chr19	1259383	1273172	chr19:1259383-1273172	3	+	1270933	1272443	0	7	255,109,107,139,82,71,746,	0,11544,11756,11945,12167,12597,13043,
#Partially deleted in new
chr19	1261155	1271433	chr19:1261155-1271433	0	+	1270933	1271433	789624	4	298,109,107,105,	0,9772,9984,10173,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	1261165	1264572	chr19:1261165-1264572	0	+	1261165	1261165	8553170	2	476,320,	0,3087,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	1261341	1264572	chr19:1261341-1264572	0	+	1261341	1261341	8553170	2	300,248,	0,2983,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	1261381	1271029	chr19:1261381-1271029	0	+	1270933	1271029	789624	3	260,211,102,	0,2871,9546,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	1261820	1264698	chr19:1261820-1264698	0	+	1261820	1261820	8553170	2	323,446,	0,2432,
#Partially deleted in new
chr19	1266652	1273172	chr19:1266652-1273172	1	+	1270933	1272443	0	7	49,109,107,139,82,71,746,	0,4275,4487,4676,4898,5328,5774,
#Partially deleted in new
chr19	1266797	1271360	chr19:1266797-1271360	0	+	1270933	1271360	789624	4	368,109,107,32,	0,4130,4342,4531,
#Partially deleted in new
chr19	1267087	1273172	chr19:1267087-1273172	1	+	1270933	1272443	0	7	205,109,107,139,82,71,746,	0,3840,4052,4241,4463,4893,5339,
#Partially deleted in new
chr19	1267153	1271151	chr19:1267153-1271151	0	+	1270933	1271151	789624	3	213,109,12,	0,3774,3986,
#Partially deleted in new
chr19	1267228	1274480	chr19:1267228-1274480	1	+	1270933	1274311	789624	7	64,109,107,139,82,71,174,	0,3699,3911,4100,4322,4752,7078,
#Partially deleted in new
chr19	1267338	1273172	chr19:1267338-1273172	0	+	1270933	1272028	789624	6	105,109,107,139,82,1192,	0,3589,3801,3990,4212,4642,
#Partially deleted in new
chr19	1267411	1274810	chr19:1267411-1274810	0	+	1270933	1274311	789624	8	32,109,107,139,82,71,134,159,	0,3516,3728,3917,4139,4569,6895,7240,
#Deleted in new
chr19	1267813	1270241	chr19:1267813-1270241	3	-	1267813	1267813	789624	2	577,417,	0,2011,
#Partially deleted in new
chr19	1269265	1272582	chr19:1269265-1272582	1	+	1270933	1272443	0	7	145,170,107,139,82,71,156,	0,1601,1874,2063,2285,2715,3161,
#Partially deleted in new
chr19	1269265	1273172	chr19:1269265-1273172	1	+	1270933	1272443	789624	6	145,170,107,139,82,1192,	0,1601,1874,2063,2285,2715,
#Partially deleted in new
chr19	1269267	1272443	chr19:1269267-1272443	1	+	1270933	1272443	789624	6	143,109,107,139,82,463,	0,1660,1872,2061,2283,2713,
#Partially deleted in new
chr19	1269326	1274595	chr19:1269326-1274595	1	+	1270933	1274311	789624	7	84,170,107,139,82,71,289,	0,1540,1813,2002,2224,2654,4980,
#Partially deleted in new
chr19	1269329	1272550	chr19:1269329-1272550	1	+	1270933	1272443	789624	7	81,4,109,107,139,82,570,	0,582,1598,1810,1999,2221,2651,
#Partially deleted in new
chr19	1269330	1271995	chr19:1269330-1271995	0	+	1270933	1271995	789624	6	80,109,107,139,82,15,	0,1597,1809,1998,2220,2650,
#Partially deleted in new
chr19	1269330	1272041	chr19:1269330-1272041	0	+	1270933	1271465	789624	5	80,170,139,82,61,	0,1536,1998,2220,2650,
#Partially deleted in new
chr19	1269330	1272552	chr19:1269330-1272552	0	+	1269330	1269330	8553170	6	80,109,328,82,71,126,	0,1597,1809,2220,2650,3096,
#Partially deleted in new
chr19	1269331	1273172	chr19:1269331-1273172	1	+	1270933	1272443	0	6	79,109,107,37,82,1192,	0,1596,1808,1997,2219,2649,
#Partially deleted in new
chr19	1269331	1272477	chr19:1269331-1272477	1	+	1270933	1272443	789624	7	76,3,109,107,139,82,497,	0,1548,1596,1808,1997,2219,2649,
#Partially deleted in new
chr19	1269331	1272777	chr19:1269331-1272777	0	+	1269331	1269331	8553170	5	79,170,328,82,797,	0,1535,1808,2219,2649,
#Partially deleted in new
chr19	1269331	1272604	chr19:1269331-1272604	0	+	1270933	1271200	789624	5	79,109,126,139,1054,	0,1596,1789,1997,2219,
#Partially deleted in new
chr19	1269331	1274807	chr19:1269331-1274807	0	+	1269331	1269331	789624	4	79,540,82,2827,	0,1596,2219,2649,
#Partially deleted in new
chr19	1269331	1272057	chr19:1269331-1272057	0	+	1269331	1269331	8553170	4	79,109,493,77,	0,1596,1808,2649,
#Partially deleted in new
chr19	1269332	1274810	chr19:1269332-1274810	0	+	1270933	1271629	789624	6	78,109,226,82,2460,162,	0,1595,1807,2218,2648,5316,
#Partially deleted in new
chr19	1269334	1274810	chr19:1269334-1274810	0	+	1270933	1271465	789624	6	76,109,139,82,2460,162,	0,1593,1994,2216,2646,5314,
#Partially deleted in new
chr19	1269335	1272600	chr19:1269335-1272600	0	+	1270933	1271465	789624	6	75,109,139,82,71,174,	0,1592,1993,2215,2645,3091,
#Partially deleted in new
chr19	1269336	1273172	chr19:1269336-1273172	1	+	1270933	1272443	0	7	74,109,107,139,82,71,746,	0,1591,1803,1992,2214,2644,3090,
#Partially deleted in new
chr19	1269336	1272550	chr19:1269336-1272550	1	+	1270933	1272443	789624	6	74,109,107,139,82,570,	0,1591,1803,1992,2214,2644,
#Partially deleted in new
chr19	1269346	1274880	chr19:1269346-1274880	0	+	1270933	1274311	789624	8	64,109,107,139,82,71,134,232,	0,1581,1793,1982,2204,2634,4960,5302,
#Partially deleted in new
chr19	1269347	1272803	chr19:1269347-1272803	0	+	1270933	1271629	789624	6	63,109,226,82,71,377,	0,1580,1792,2203,2633,3079,
#Partially deleted in new
chr19	1269347	1274880	chr19:1269347-1274880	0	+	1270933	1271465	789624	7	63,109,139,82,71,134,232,	0,1580,1981,2203,2633,4959,5301,
#Partially deleted in new
chr19	1269349	1274810	chr19:1269349-1274810	1	+	1270933	1274311	789624	7	61,109,107,139,82,71,504,	0,1578,1790,1979,2201,2631,4957,
#Partially deleted in new
chr19	1269350	1271639	chr19:1269350-1271639	0	+	1270933	1271639	789624	4	60,109,107,311,	0,1577,1789,1978,
#Partially deleted in new
chr19	1269351	1274773	chr19:1269351-1274773	0	+	1270933	1273600	789624	9	59,109,107,139,82,71,222,138,125,	0,1576,1788,1977,2199,2629,4142,4955,5297,
#Partially deleted in new
chr19	1269355	1272374	chr19:1269355-1272374	0	+	1270933	1271200	789624	6	55,109,126,139,82,394,	0,1572,1765,1973,2195,2625,
#Deleted in new
chr19	1270942	1273104	chr19:1270942-1273104	0	+	1270942	1273004	789624	4	94,107,33,136,	0,197,386,2026,
#Deleted in new
chr19	1271029	1274810	chr19:1271029-1274810	0	+	1271029	1273660	789624	6	7,82,71,115,134,162,	0,521,951,2571,3277,3619,
#Deleted in new
chr19	1271981	1274806	chr19:1271981-1274806	0	+	1271981	1273600	789624	4	70,222,134,158,	0,1512,2325,2667,
#Deleted in new
chr19	1272916	1274810	chr19:1272916-1274810	0	+	1272916	1272916	8553170	3	109,90,162,	0,1434,1732,
#Deleted in new
chr19	1272924	1274810	chr19:1272924-1274810	0	+	1272924	1272924	8553170	3	791,134,162,	0,1382,1724,
#Deleted in new
chr19	1273503	1274810	chr19:1273503-1274810	0	+	1273503	1273503	8553170	2	212,504,	0,803,
#Deleted in new
chr19	1273553	1274805	chr19:1273553-1274805	0	+	1273553	1273553	8553170	2	887,157,	0,1095,
#Partially deleted in new
chr19	1275437	1279249	chr19:1275437-1279249	3	+	1275549	1278777	789624	3	393,117,473,	0,1745,3339,
#Partially deleted in new
chr19	1276020	1279244	chr19:1276020-1279244	1	+	1278810	1279209	789624	3	83,117,468,	0,1162,2756,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	1276092	1279244	chr19:1276092-1279244	0	+	1276092	1276092	8553170	2	1207,468,	0,2684,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	1276099	1278836	chr19:1276099-1278836	0	+	1276099	1276099	8553170	3	574,117,60,	0,1083,2677,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	1276875	1279244	chr19:1276875-1279244	0	+	1276875	1276875	8553170	3	42,48,468,	0,994,1901,
#Partially deleted in new
chr19	1286153	1300237	chr19:1286153-1300237	3	+	1286168	1299945	0	4	155,314,66,414,	0,9391,12397,13670,
#Deleted in new
chr19	1307400	1307719	chr19:1307400-1307719	7	-	1307400	1307400	16724991	1	319,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	1321224	1322846	chr19:1321224-1322846	3	+	1321224	1321224	8553170	2	766,472,	0,1150,
#Deleted in new
chr19	1354710	1357094	chr19:1354710-1357094	0	+	1356389	1357094	789624	3	310,126,86,	0,1613,2298,
#Partially deleted in new
chr19	1354921	1360631	chr19:1354921-1360631	0	+	1354921	1354921	8553170	5	99,126,1456,113,496,	0,1402,2087,3666,5214,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	1354971	1359894	chr19:1354971-1359894	0	+	1354971	1354971	8553170	4	49,86,71,1307,	0,2037,3422,3616,
#Partially deleted in new
chr19	1354976	1360711	chr19:1354976-1360711	0	+	1356389	1360711	789624	5	159,126,86,71,576,	0,1347,2032,3417,5159,
#Partially deleted in new
chr19	1356289	1371479	chr19:1356289-1371479	0	+	1356389	1358610	789624	12	160,86,71,113,897,102,71,77,61,76,51,838,	0,719,2104,2298,3846,5960,8219,10015,10870,12975,13306,14352,
#Partially deleted in new
chr19	1356313	1378431	chr19:1356313-1378431	3	+	1356389	1376576	789624	13	136,86,71,897,102,71,77,61,76,51,437,89,1913,	0,695,2080,3822,5936,8195,9991,10846,12951,13282,14328,16758,20205,
#Partially deleted in new
chr19	1356316	1360606	chr19:1356316-1360606	0	+	1356389	1358610	789624	5	133,86,71,106,471,	0,692,2077,2271,3819,
#Partially deleted in new
chr19	1356363	1377094	chr19:1356363-1377094	1	+	1356389	1373124	789624	14	86,86,71,897,102,71,77,61,76,51,437,157,89,576,	0,645,2030,3772,5886,8145,9941,10796,12901,13232,14278,14870,16708,20155,
#Partially deleted in new
chr19	1356363	1377094	chr19:1356363-1377094	0	+	1356389	1358610	789624	14	86,86,71,113,897,102,71,77,61,76,51,437,89,576,	0,645,2030,2224,3772,5886,8145,9941,10796,12901,13232,14278,16708,20155,
#Partially deleted in new
chr19	1356389	1373160	chr19:1356389-1373160	1	+	1356389	1373124	789624	13	60,86,71,897,102,71,77,61,76,51,437,157,89,	0,619,2004,3746,5860,8119,9915,10770,12875,13206,14252,14844,16682,
#Partially deleted in new
chr19	1361895	1366351	chr19:1361895-1366351	0	+	1361895	1361895	8553170	3	456,71,47,	0,2613,4409,
#Partially deleted in new
chr19	1369103	1370778	chr19:1369103-1370778	0	+	1369103	1369103	8553170	3	237,51,137,	0,492,1538,
#Partially deleted in new
chr19	1371322	1376865	chr19:1371322-1376865	0	+	1371322	1371322	8553170	3	64,89,347,	0,1749,5196,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	1372098	1376917	chr19:1372098-1376917	0	+	1372098	1372098	8553170	2	1062,399,	0,4420,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	1372237	1374364	chr19:1372237-1374364	3	-	1372237	1372237	8553170	1	2127,	0,
#Partially deleted in new
chr19	1373506	1376917	chr19:1373506-1376917	0	+	1373506	1373506	8553170	2	865,399,	0,3012,
#Partially deleted in new
chr19	1373506	1378428	chr19:1373506-1378428	0	+	1373506	1373506	8553170	2	543,1910,	0,3012,
#Deleted in new
chr19	1376772	1377238	chr19:1376772-1377238	0	-	1376772	1376772	8553170	2	308,54,	0,412,
#Deleted in new
chr19	1376772	1377520	chr19:1376772-1377520	3	-	1376772	1376772	8553170	2	314,78,	0,670,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	1383526	1393545	chr19:1383526-1393545	1	+	1383926	1393407	0	8	82,235,37,69,106,180,47,304,	0,181,4284,4998,5306,7344,7592,9715,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	1383630	1395589	chr19:1383630-1395589	3	+	1383926	1395488	0	8	312,37,69,106,180,47,89,199,	0,4180,4894,5202,7240,7488,9611,11760,
#Partially deleted in new
chr19	1383874	1395584	chr19:1383874-1395584	0	+	1383874	1383874	8553170	6	68,37,414,180,47,2343,	0,3936,4650,6996,7244,9367,
#Partially deleted in new
chr19	1383883	1395488	chr19:1383883-1395488	1	+	1383926	1395488	789624	10	59,37,69,106,180,19,35,89,10,84,	0,3927,4641,4949,6987,7183,7247,9358,11507,11521,
#Partially deleted in new
chr19	1383889	1395584	chr19:1383889-1395584	0	+	1383889	1383889	8553170	5	267,37,414,295,2343,	0,3921,4635,6981,9352,
#Partially deleted in new
chr19	1383899	1393877	chr19:1383899-1393877	0	+	1383899	1383899	8553170	6	43,37,69,106,295,636,	0,3911,4625,4933,6971,9342,
#Partially deleted in new
chr19	1383899	1395589	chr19:1383899-1395589	1	+	1383926	1394422	789624	8	43,37,69,106,180,47,89,1172,	0,3911,4625,4933,6971,7219,9342,10518,
#Partially deleted in new
chr19	1383903	1395581	chr19:1383903-1395581	1	+	1383926	1393407	0	7	39,37,69,106,180,47,2340,	0,3907,4621,4929,6967,7215,9338,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	1383903	1393710	chr19:1383903-1393710	0	+	1383903	1383903	8553170	6	39,37,69,2218,47,469,	0,3907,4621,4929,7215,9338,
#Partially deleted in new
chr19	1383906	1395576	chr19:1383906-1395576	0	+	1383926	1388916	789624	8	31,37,69,106,180,47,89,186,	0,3904,4618,4926,6964,7212,9335,11484,
#Partially deleted in new
chr19	1383917	1395588	chr19:1383917-1395588	1	+	1383926	1395488	789624	10	25,37,69,106,180,6,45,89,10,187,	0,3893,4607,4915,6953,7193,7203,9324,11473,11484,
#Partially deleted in new
chr19	1383921	1393532	chr19:1383921-1393532	1	+	1383926	1393407	789624	7	21,37,69,196,180,47,291,	0,3889,4603,4821,6949,7197,9320,
#Partially deleted in new
chr19	1384050	1393326	chr19:1384050-1393326	0	+	1384050	1384050	8553170	7	106,37,69,106,180,47,85,	0,3760,4474,4782,6820,7068,9191,
#Deleted in new
chr19	1386803	1389651	chr19:1386803-1389651	3	-	1386803	1386803	8553170	3	359,83,924,	0,1414,1924,
#Partially deleted in new
chr19	1387738	1393661	chr19:1387738-1393661	0	+	1387738	1387738	8553170	6	109,69,106,180,47,420,	0,786,1094,3132,3380,5503,
#Partially deleted in new
chr19	1387803	1395589	chr19:1387803-1395589	0	+	1387803	1387803	8553170	7	44,69,106,180,47,89,1172,	0,721,1029,3067,3315,5438,6614,
#Partially deleted in new
chr19	1387999	1395584	chr19:1387999-1395584	0	+	1387999	1387999	8553170	6	305,69,106,180,47,2343,	0,525,833,2871,3119,5242,
#Deleted in new
chr19	1388024	1388799	chr19:1388024-1388799	0	+	1388024	1388024	8553170	2	280,275,	0,500,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	1391841	1395584	chr19:1391841-1395584	0	+	1391841	1391841	8553170	1	3743,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	1392169	1396467	chr19:1392169-1396467	3	-	1392169	1392169	8553170	3	1437,470,1664,	0,1718,2634,
#Deleted in new
chr19	1393565	1394867	chr19:1393565-1394867	0	-	1393565	1393565	8553170	3	37,470,64,	0,322,1238,
#Deleted in new
chr19	1393577	1394878	chr19:1393577-1394878	0	-	1393577	1393577	8553170	3	29,470,75,	0,310,1226,
#Partially deleted in new
chr19	1397025	1401553	chr19:1397025-1401553	3	-	1397358	1401476	0	6	474,111,68,64,146,258,	0,1890,2102,2498,2767,4270,
#Partially deleted in new
chr19	1397267	1401494	chr19:1397267-1401494	1	-	1397358	1401476	789624	6	232,111,68,64,146,130,	0,1648,1860,2256,2525,4097,
#Partially deleted in new
chr19	1397382	1399747	chr19:1397382-1399747	0	-	1397382	1397382	8553170	4	117,111,68,224,	0,1533,1745,2141,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	1397810	1401570	chr19:1397810-1401570	1	-	1398675	1401476	0	5	1216,68,64,146,275,	0,1317,1713,1982,3485,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	1398599	1399802	chr19:1398599-1399802	0	-	1398675	1399802	789624	5	148,111,68,64,10,	0,316,528,924,1193,
#Partially deleted in new
chr19	1407568	1435684	chr19:1407568-1435684	1	+	1407773	1433827	0	13	234,41,167,66,111,49,83,154,30,141,177,89,948,	0,9931,10635,11097,13579,14779,18309,21273,22398,22653,24945,26170,27168,
#Partially deleted in new
chr19	1407612	1435687	chr19:1407612-1435687	3	+	1407773	1434912	0	12	190,41,167,66,111,49,83,154,30,141,177,951,	0,9887,10591,11053,13535,14735,18265,21229,22354,22609,24901,27124,
#Partially deleted in new
chr19	1407612	1435687	chr19:1407612-1435687	1	+	1407773	1434912	789624	12	190,41,167,66,111,49,83,154,30,141,177,948,	0,9887,10591,11053,13535,14735,18265,21229,22354,22609,24901,27127,
#Partially deleted in new
chr19	1407676	1428903	chr19:1407676-1428903	0	+	1407676	1407676	8553170	7	126,41,167,66,108,49,62,	0,9823,10527,10989,13474,14671,21165,
#Partially deleted in new
chr19	1407679	1435683	chr19:1407679-1435683	1	+	1407773	1434912	789624	12	123,41,167,66,108,49,83,154,30,141,177,947,	0,9820,10524,10986,13471,14668,18198,21162,22287,22542,24834,27057,
#Partially deleted in new
chr19	1407734	1432690	chr19:1407734-1432690	0	+	1407773	1432690	789624	10	68,41,167,111,49,83,154,30,141,177,	0,9765,10469,13413,14613,18143,21107,22232,22487,24779,
#Partially deleted in new
chr19	1409823	1418709	chr19:1409823-1418709	0	+	1409823	1409823	8553170	4	256,41,167,44,	0,7676,8380,8842,
#Deleted in new
chr19	1415739	1421232	chr19:1415739-1421232	0	+	1415739	1415739	8553170	5	201,41,167,66,85,	0,1760,2464,2926,5408,
#Partially deleted in new
chr19	1415969	1435687	chr19:1415969-1435687	0	+	1415969	1415969	8553170	10	1571,167,66,111,49,154,30,141,177,948,	0,2234,2696,5178,6378,12872,13997,14252,16544,18770,
#Partially deleted in new
chr19	1426348	1435684	chr19:1426348-1435684	0	+	1426348	1426348	8553170	5	2647,30,141,177,948,	0,3618,3873,6165,8388,
#Deleted in new
chr19	1432042	1435684	chr19:1432042-1435684	0	+	1432042	1432042	8553170	1	3642,	0,
#Partially deleted in new
chr19	1438357	1440494	chr19:1438357-1440494	3	+	1438884	1440462	789624	4	71,82,235,146,	0,453,1661,1991,
#Partially deleted in new
chr19	1438384	1440494	chr19:1438384-1440494	1	+	1440028	1440462	789624	4	44,86,286,146,	0,422,1583,1964,
#Partially deleted in new
chr19	1438385	1440494	chr19:1438385-1440494	1	+	1438425	1440462	0	4	43,86,235,146,	0,421,1633,1963,
#Partially deleted in new
chr19	1438399	1440490	chr19:1438399-1440490	1	+	1438891	1440462	789624	4	29,86,293,142,	0,407,1561,1949,
#Partially deleted in new
chr19	1438400	1440494	chr19:1438400-1440494	1	+	1438884	1440462	789624	3	492,235,146,	0,1618,1948,
#Partially deleted in new
chr19	1438404	1440233	chr19:1438404-1440233	0	+	1440028	1440233	789624	4	24,86,111,215,	0,402,1311,1614,
#Partially deleted in new
chr19	1438404	1440488	chr19:1438404-1440488	1	+	1438425	1440462	789624	4	24,86,223,140,	0,402,1614,1944,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	1438405	1440494	chr19:1438405-1440494	1	+	1440028	1440462	789624	5	23,86,221,235,146,	0,401,1200,1613,1943,
#Partially deleted in new
chr19	1438418	1440494	chr19:1438418-1440494	1	+	1438556	1440462	789624	4	162,86,235,146,	0,388,1600,1930,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	1438419	1440494	chr19:1438419-1440494	0	+	1438419	1438419	8553170	3	9,1447,146,	0,387,1929,
#Partially deleted in new
chr19	1438420	1440494	chr19:1438420-1440494	1	+	1438425	1440319	789624	3	8,86,476,	0,386,1598,
#Partially deleted in new
chr19	1438421	1440494	chr19:1438421-1440494	1	+	1440028	1440462	789624	4	7,86,228,146,	0,385,1604,1927,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	1438421	1440049	chr19:1438421-1440049	0	+	1440028	1440049	789624	4	7,86,221,24,	0,385,1184,1604,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	1440838	1441938	chr19:1440838-1441938	3	+	1440838	1440838	8553170	1	1100,	0,
#Partially deleted in new
chr19	1446301	1455245	chr19:1446301-1455245	0	+	1453001	1455245	789624	5	40,159,91,181,97,	0,6682,6945,7129,8847,
#Partially deleted in new
chr19	1450148	1473244	chr19:1450148-1473244	3	+	1453001	1470213	789624	15	190,159,91,181,109,117,78,99,391,96,140,78,117,215,8090,	0,2835,3098,3282,5000,5235,5927,6157,6704,7816,10032,10631,10888,11814,15006,
#Partially deleted in new
chr19	1450148	1465409	chr19:1450148-1465409	0	+	1453001	1465409	789624	15	190,159,91,181,109,117,78,99,391,96,140,78,117,215,255,	0,2835,3098,3282,5000,5235,5927,6157,6704,7816,10032,10631,10888,11814,15006,
#Partially deleted in new
chr19	1450148	1455445	chr19:1450148-1455445	0	+	1453001	1455445	789624	6	182,159,91,181,109,59,	0,2835,3098,3282,5000,5238,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	1450294	1465418	chr19:1450294-1465418	0	+	1450294	1450294	8553170	14	44,159,91,181,109,114,78,99,1208,140,78,117,215,264,	0,2689,2952,3136,4854,5092,5781,6011,6558,9886,10485,10742,11668,14860,
#Partially deleted in new
chr19	1451288	1473244	chr19:1451288-1473244	1	+	1453001	1470213	789624	14	1854,91,181,109,117,78,99,391,96,140,78,117,215,8090,	0,1958,2142,3860,4095,4787,5017,5564,6676,8892,9491,9748,10674,13866,
#Deleted in new
chr19	1452197	1453614	chr19:1452197-1453614	0	+	1453001	1453614	789624	4	121,159,91,184,	0,786,1049,1233,
#Partially deleted in new
chr19	1452799	1465496	chr19:1452799-1465496	0	+	1453001	1465496	789624	14	343,91,181,109,114,78,99,391,96,140,78,117,215,342,	0,447,631,2349,2587,3276,3506,4053,5165,7381,7980,8237,9163,12355,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	1457669	1458580	chr19:1457669-1458580	3	-	1457669	1457669	8553170	1	911,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	1461142	1479201	chr19:1461142-1479201	1	-	1461738	1478903	789624	3	682,132,39,	0,17631,18020,
#Partially deleted in new
chr19	1473200	1479118	chr19:1473200-1479118	3	-	1475031	1478903	789624	2	2058,345,	0,5573,
#Partially deleted in new
chr19	1473203	1479194	chr19:1473203-1479194	1	-	1474814	1478903	789624	4	1851,113,132,32,	0,1942,5570,5959,
#Partially deleted in new
chr19	1473947	1479556	chr19:1473947-1479556	1	-	1475031	1478903	789624	3	1311,132,394,	0,4826,5215,
#Partially deleted in new
chr19	1474154	1479216	chr19:1474154-1479216	1	-	1475031	1478903	789624	3	1104,252,54,	0,4499,5008,
#Partially deleted in new
chr19	1474167	1479181	chr19:1474167-1479181	1	-	1475031	1478903	789624	3	1091,132,42,	0,4606,4972,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	1474171	1476485	chr19:1474171-1476485	0	-	1474171	1474171	8553170	1	2314,	0,
#Partially deleted in new
chr19	1474173	1479183	chr19:1474173-1479183	1	-	1475031	1478903	789624	3	1085,132,70,	0,4600,4940,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	1474185	1478916	chr19:1474185-1478916	1	-	1475383	1478903	789624	2	1329,143,	0,4588,
#Partially deleted in new
chr19	1474478	1478897	chr19:1474478-1478897	0	-	1475234	1478897	789624	2	761,124,	0,4295,
#Partially deleted in new
chr19	1475903	1479213	chr19:1475903-1479213	1	-	1476187	1478903	789624	3	391,132,51,	0,2870,3259,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	1478412	1479219	chr19:1478412-1479219	0	-	1478412	1478412	8553170	3	168,132,57,	0,361,750,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	1478434	1479134	chr19:1478434-1479134	0	-	1478434	1478434	8553170	2	471,21,	0,679,
#Partially deleted in new
chr19	1481427	1490408	chr19:1481427-1490408	3	-	1481758	1490346	789624	15	780,123,125,180,118,104,101,213,173,89,77,129,93,105,251,	0,925,1468,1856,2222,2410,2599,5425,5713,6175,6357,6536,6760,8365,8730,
#Partially deleted in new
chr19	1481427	1490342	chr19:1481427-1490342	0	-	1481427	1481427	8553170	12	780,123,180,118,104,101,213,173,77,129,93,550,	0,925,1856,2222,2410,2599,5425,5713,6357,6536,6760,8365,
#Partially deleted in new
chr19	1481427	1490411	chr19:1481427-1490411	0	-	1481427	1481427	8553170	10	780,123,180,292,101,461,77,129,93,619,	0,925,1856,2222,2599,5425,6357,6536,6760,8365,
#Partially deleted in new
chr19	1481427	1490335	chr19:1481427-1490335	0	-	1484048	1490335	789624	14	780,74,125,180,118,104,101,121,173,77,129,93,105,178,	0,974,1468,1856,2222,2410,2599,5425,5713,6357,6536,6760,8365,8730,
#Deleted in new
chr19	1481985	1482667	chr19:1481985-1482667	0	-	1481985	1481985	8553170	2	222,315,	0,367,
#Partially deleted in new
chr19	1482410	1490405	chr19:1482410-1490405	0	-	1482410	1482410	8553170	12	65,125,180,118,104,101,461,77,129,93,105,248,	0,485,873,1239,1427,1616,4442,5374,5553,5777,7382,7747,
#Deleted in new
chr19	1482438	1483844	chr19:1482438-1483844	0	-	1482438	1482438	8553170	4	37,125,180,195,	0,457,845,1211,
#Deleted in new
chr19	1483497	1484127	chr19:1483497-1484127	0	-	1483497	1483497	8553170	2	444,101,	0,529,
#Partially deleted in new
chr19	1487197	1490752	chr19:1487197-1490752	0	-	1487197	1487197	8553170	5	116,77,129,93,150,	0,587,766,990,3405,
#Partially deleted in new
chr19	1487217	1490377	chr19:1487217-1490377	0	-	1487217	1490346	789624	6	96,77,129,93,105,220,	0,567,746,970,2575,2940,
#Partially deleted in new
chr19	1487292	1490737	chr19:1487292-1490737	0	-	1487292	1487292	8553170	6	21,77,129,93,105,135,	0,492,671,895,2500,3310,
#Partially deleted in new
chr19	1487847	1490184	chr19:1487847-1490184	0	-	1487847	1487847	8553170	3	245,93,392,	0,340,1945,
#Partially deleted in new
chr19	1487963	1490446	chr19:1487963-1490446	0	-	1487963	1487963	8553170	5	129,93,103,105,24,	0,224,1629,1829,2459,
#Partially deleted in new
chr19	1490746	1497927	chr19:1490746-1497927	3	+	1491269	1497211	789624	5	638,94,139,169,754,	0,4547,4722,5538,6427,
#Partially deleted in new
chr19	1491165	1496181	chr19:1491165-1496181	0	+	1491165	1491165	8553170	3	219,94,713,	0,4128,4303,
#Deleted in new
chr19	1495362	1497498	chr19:1495362-1497498	0	+	1495362	1497211	789624	5	25,139,169,81,325,	0,106,922,1228,1811,
#Deleted in new
chr19	1495475	1497721	chr19:1495475-1497721	0	+	1495475	1497211	789624	5	132,169,81,149,80,	0,809,1115,1698,2166,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	1505017	1513189	chr19:1505017-1513189	3	-	1506014	1510943	789624	12	1299,72,190,164,87,112,128,109,61,92,316,227,	0,1572,1721,2224,2539,2980,3425,5132,5350,5621,5827,7945,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	1505040	1505995	chr19:1505040-1505995	0	-	1505040	1505040	8553170	2	160,181,	0,774,
#Partially deleted in new
chr19	1505866	1511136	chr19:1505866-1511136	0	-	1505866	1505866	8553170	11	442,190,164,87,112,128,109,61,95,73,101,	0,872,1375,1690,2131,2576,4283,4501,4772,4978,5169,
#Partially deleted in new
chr19	1505866	1511136	chr19:1505866-1511136	0	-	1505866	1505866	8553170	12	450,72,190,164,87,112,128,109,61,95,73,61,	0,723,872,1375,1690,2131,2576,4283,4501,4772,4978,5209,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	1506261	1513189	chr19:1506261-1513189	1	-	1506261	1507400	789624	11	47,190,164,87,112,128,109,61,92,316,227,	0,477,980,1295,1736,2181,3888,4106,4377,4583,6701,
#Deleted in new
chr19	1506625	1507422	chr19:1506625-1507422	0	-	1506625	1506625	8553170	2	303,181,	0,616,
#Deleted in new
chr19	1506738	1507596	chr19:1506738-1507596	0	-	1506738	1507596	789624	3	190,164,52,	0,503,806,
#Partially deleted in new
chr19	1507997	1513019	chr19:1507997-1513019	0	-	1507997	1511680	789624	8	112,128,109,61,92,73,103,57,	0,445,2152,2370,2641,2847,3627,4965,
#Deleted in new
chr19	1508374	1508963	chr19:1508374-1508963	3	+	1508374	1508374	8553170	2	387,70,	0,519,
#Partially deleted in new
chr19	1508537	1513019	chr19:1508537-1513019	0	-	1508537	1511680	789624	7	33,109,61,92,73,148,57,	0,1612,1830,2101,2307,3087,4425,
#Partially deleted in new
chr19	1508812	1513556	chr19:1508812-1513556	0	-	1508812	1508812	8553170	6	96,109,61,92,73,594,	0,1337,1555,1826,2032,4150,
#Partially deleted in new
chr19	1510149	1513604	chr19:1510149-1513604	0	-	1510149	1511680	789624	6	109,61,92,73,103,136,	0,218,489,695,1475,3319,
#Partially deleted in new
chr19	1524073	1535453	chr19:1524073-1535453	3	+	1526996	1535250	789624	14	173,114,117,130,88,96,199,127,77,85,78,146,111,389,	0,1231,1521,2412,2630,2829,3862,4228,4824,5332,5673,7664,9857,10991,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	1524076	1536046	chr19:1524076-1536046	1	+	1526996	1535250	789624	13	170,114,117,130,88,96,199,127,77,85,78,146,982,	0,1228,1518,2409,2627,2826,3859,4225,4821,5329,5670,7661,10988,
#Partially deleted in new
chr19	1524076	1535365	chr19:1524076-1535365	1	+	1526996	1534001	789624	15	170,114,117,130,88,96,199,127,77,85,78,146,130,111,301,	0,1228,1518,2409,2627,2826,3859,4225,4821,5329,5670,7661,9642,9854,10988,
#Partially deleted in new
chr19	1524958	1535456	chr19:1524958-1535456	1	+	1526996	1535250	789624	13	460,117,130,88,96,199,127,77,85,78,146,111,392,	0,636,1527,1745,1944,2977,3343,3939,4447,4788,6779,8972,10106,
#Deleted in new
chr19	1528336	1529048	chr19:1528336-1529048	0	+	1528336	1528336	8553170	2	92,151,	0,561,
#Partially deleted in new
chr19	1554668	1568058	chr19:1554668-1568058	3	-	1555562	1568058	0	2	2255,595,	0,12795,
#Partially deleted in new
chr19	1554671	1567530	chr19:1554671-1567530	0	-	1555330	1567530	789624	3	718,1347,67,	0,905,12792,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	1570574	1570860	chr19:1570574-1570860	3	-	1570574	1570574	8553170	1	286,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	1573595	1592801	chr19:1573595-1592801	1	-	1578339	1592631	0	7	4563,204,178,91,138,160,184,	0,4739,7496,9026,10944,11459,19022,
#Partially deleted in new
chr19	1576639	1585530	chr19:1576639-1585530	1	-	1578339	1585156	789624	5	1899,178,91,138,476,	0,4452,5982,7900,8415,
#Partially deleted in new
chr19	1576639	1585307	chr19:1576639-1585307	0	-	1578485	1585156	789624	6	1519,200,178,91,138,253,	0,1695,4452,5982,7900,8415,
#Partially deleted in new
chr19	1576677	1592708	chr19:1576677-1592708	3	-	1578339	1592631	0	7	1481,204,178,91,138,160,187,	0,1657,4414,5944,7862,8377,15844,
#Deleted in new
chr19	1576938	1577086	chr19:1576938-1577086	3	+	1576938	1576938	8553170	1	148,	0,
#Partially deleted in new
chr19	1577745	1585333	chr19:1577745-1585333	0	-	1577745	1577745	8553170	5	789,178,91,138,279,	0,3346,4876,6794,7309,
#Partially deleted in new
chr19	1578011	1584954	chr19:1578011-1584954	0	-	1578011	1578011	8553170	5	147,204,178,91,415,	0,323,3080,4610,6528,
#Partially deleted in new
chr19	1578338	1605445	chr19:1578338-1605445	3	-	1599439	1605409	8553170	7	200,178,91,138,160,149,86,	0,2753,4283,6201,6716,21073,27021,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	1578444	1581737	chr19:1578444-1581737	0	-	1578444	1578444	8553170	2	94,646,	0,2647,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	1581107	1584573	chr19:1581107-1584573	0	-	1583290	1584573	789624	4	162,91,128,34,	0,1514,2145,3432,
#Partially deleted in new
chr19	1581158	1592359	chr19:1581158-1592359	0	-	1581158	1585156	789624	5	111,91,138,160,83,	0,1463,3381,3896,11118,
#Partially deleted in new
chr19	1581209	1586362	chr19:1581209-1586362	0	-	1581209	1585156	789624	5	60,91,138,160,458,	0,1412,3330,3845,4695,
#Partially deleted in new
chr19	1585054	1592392	chr19:1585054-1592392	0	-	1585054	1585156	789624	2	160,408,	0,6930,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	1597171	1605490	chr19:1597171-1605490	3	-	1599439	1605409	0	3	1044,149,131,	0,2240,8188,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	1598048	1605436	chr19:1598048-1605436	1	-	1599439	1605409	0	3	278,149,77,	0,1363,7311,
#Partially deleted in new
chr19	1598048	1605443	chr19:1598048-1605443	0	-	1598048	1598048	8553170	4	167,149,133,84,	0,1363,4245,7311,
#Partially deleted in new
chr19	1598921	1605473	chr19:1598921-1605473	1	-	1599439	1605409	0	2	639,114,	0,6438,
#Partially deleted in new
chr19	1609289	1652329	chr19:1609289-1652329	3	-	1611706	1650248	0	19	2560,236,136,124,159,74,79,59,133,170,103,50,133,68,79,74,73,111,30,	0,5995,6396,9821,10026,10490,11678,11843,12548,12764,13023,14661,16286,18069,22748,23042,37065,40887,43010,
#Partially deleted in new
chr19	1609289	1652329	chr19:1609289-1652329	1	-	1611706	1650248	789624	17	2560,227,136,124,159,74,79,59,133,170,103,50,133,68,73,111,30,	0,2917,6396,9821,10026,10490,11678,11843,12548,12764,13023,14661,16286,18069,37065,40887,43010,
#Deleted in new
chr19	1609290	1615798	chr19:1609290-1615798	0	-	1615442	1615798	789624	5	309,146,227,201,113,	0,2413,2916,5994,6395,
#Partially deleted in new
chr19	1609292	1652591	chr19:1609292-1652591	1	-	1611706	1650248	789624	20	1208,146,224,136,124,159,74,79,59,133,170,103,50,133,68,166,74,73,114,292,	0,2411,2914,6393,9818,10023,10487,11675,11840,12545,12761,13020,14658,16283,18066,22658,23039,37062,40884,43007,
#Partially deleted in new
chr19	1609292	1619135	chr19:1609292-1619135	0	-	1611706	1619135	789624	5	1208,146,236,136,25,	0,2411,5992,6393,9818,
#Partially deleted in new
chr19	1609292	1619209	chr19:1609292-1619209	0	-	1611706	1619209	789624	5	2077,146,236,136,99,	0,2411,5992,6393,9818,
#Partially deleted in new
chr19	1609292	1650278	chr19:1609292-1650278	1	-	1611706	1650248	0	18	2557,236,136,124,159,74,79,59,133,170,103,50,133,68,79,74,73,102,	0,5992,6393,9818,10023,10487,11675,11840,12545,12761,13020,14658,16283,18066,22745,23039,37062,40884,
#Deleted in new
chr19	1609471	1615804	chr19:1609471-1615804	0	-	1611706	1615804	789624	4	128,146,236,119,	0,2232,5813,6214,
#Deleted in new
chr19	1610964	1615798	chr19:1610964-1615798	0	-	1611706	1615798	789624	3	885,224,113,	0,1242,4721,
#Partially deleted in new
chr19	1611055	1619347	chr19:1611055-1619347	0	-	1611706	1619347	789624	5	794,227,136,124,32,	0,1151,4630,8055,8260,
#Partially deleted in new
chr19	1611167	1650745	chr19:1611167-1650745	1	-	1611706	1650248	0	19	202,146,227,136,124,159,74,79,59,133,170,103,50,133,68,79,74,73,569,	0,536,1039,4518,7943,8148,8612,9800,9965,10670,10886,11145,12783,14408,16191,20870,21164,35187,39009,
#Partially deleted in new
chr19	1611167	1619853	chr19:1611167-1619853	0	-	1611706	1619853	789624	6	202,146,227,136,364,74,	0,536,1039,4518,7943,8612,
#Partially deleted in new
chr19	1611248	1652604	chr19:1611248-1652604	1	-	1611706	1650248	0	16	601,537,124,159,74,79,59,133,170,103,50,133,68,73,111,305,	0,4036,7862,8067,8531,9719,9884,10589,10805,11064,12702,14327,16110,35106,38928,41051,
#Partially deleted in new
chr19	1611313	1619150	chr19:1611313-1619150	0	-	1615442	1619150	789624	5	536,227,231,136,40,	0,893,3971,4372,7797,
#Partially deleted in new
chr19	1611686	1622236	chr19:1611686-1622236	0	-	1611686	1611686	8553170	10	163,236,136,124,156,74,79,59,133,183,	0,3598,3999,7424,7629,8093,9281,9446,10151,10367,
#Deleted in new
chr19	1611754	1615798	chr19:1611754-1615798	0	-	1615442	1615798	789624	3	95,201,113,	0,3530,3931,
#Partially deleted in new
chr19	1615790	1621206	chr19:1615790-1621206	0	-	1615790	1615790	8553170	6	31,124,159,74,79,74,	0,3320,3525,3989,5177,5342,
#Partially deleted in new
chr19	1615810	1621046	chr19:1615810-1621046	0	-	1615810	1621046	789624	4	11,124,74,79,	0,3300,3969,5157,
#Deleted in new
chr19	1616491	1616595	chr19:1616491-1616595	3	-	1616491	1616491	8553170	1	104,	0,
#Partially deleted in new
chr19	1622323	1652605	chr19:1622323-1652605	0	-	1622323	1650248	789624	9	92,50,133,68,79,74,73,111,306,	0,1627,3252,5035,9714,10008,24031,27853,29976,
#Partially deleted in new
chr19	1632050	1651356	chr19:1632050-1651356	0	-	1632050	1650248	789624	5	66,74,73,111,307,	0,281,14304,18126,18999,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	1724114	1724395	chr19:1724114-1724395	3	+	1724114	1724114	8553170	1	281,	0,
#Deleted in new
chr19	1748055	1748741	chr19:1748055-1748741	0	+	1748055	1748055	8553170	2	43,229,	0,457,
#Deleted in new
chr19	1748159	1748745	chr19:1748159-1748745	3	+	1748159	1748159	8553170	2	182,233,	0,353,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	1752372	1780988	chr19:1752372-1780988	3	+	1753662	1775445	789624	2	2482,5836,	0,22780,
#Partially deleted in new
chr19	1782074	1812276	chr19:1782074-1812276	3	-	1783027	1811736	789624	29	1196,128,139,240,84,224,367,100,76,112,135,113,189,169,32,209,191,89,159,83,71,73,62,99,114,92,62,396,91,	0,2744,3084,3394,5028,6822,7286,7815,8682,9675,9926,13800,14002,14636,14899,17872,18184,19881,20412,23299,23813,24022,24553,25093,26147,27568,28547,29414,30111,
#Partially deleted in new
chr19	1782076	1812276	chr19:1782076-1812276	0	-	1809671	1811736	789624	29	1194,128,139,240,84,224,254,100,76,112,165,113,189,169,32,209,191,89,159,83,71,412,62,99,114,92,62,284,91,	0,2742,3082,3392,5026,6820,7284,7813,8680,9673,9894,13798,14000,14634,14897,17870,18182,19879,20410,23297,23811,24020,24551,25091,26145,27566,28545,29524,30109,
#Partially deleted in new
chr19	1783027	1812200	chr19:1783027-1812200	1	-	1783027	1811577	789624	29	243,128,139,240,84,224,367,100,76,112,165,113,189,169,32,209,191,107,159,83,71,73,62,99,114,92,62,178,133,	0,1791,2131,2441,4075,5869,6333,6862,7729,8722,8943,12847,13049,13683,13946,16919,17231,18928,19459,22346,22860,23069,23600,24140,25194,26615,27594,28461,29040,
#Partially deleted in new
chr19	1785557	1790817	chr19:1785557-1790817	0	-	1789672	1790817	789624	5	151,84,224,367,61,	0,1545,3339,3803,5199,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	1798760	1812276	chr19:1798760-1812276	1	-	1799650	1811577	789624	14	1395,191,89,159,83,71,73,62,99,114,92,62,178,91,	0,1498,3195,3726,6613,7127,7336,7867,8407,9461,10882,11861,12728,13425,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	1798763	1806160	chr19:1798763-1806160	0	-	1798763	1798763	8553170	6	1392,191,89,159,83,273,	0,1495,3192,3723,6610,7124,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	1805189	1811624	chr19:1805189-1811624	0	-	1805189	1805189	8553170	10	90,83,71,73,62,99,114,92,62,136,	0,184,698,907,1438,1978,3032,4453,5432,6299,
#Partially deleted in new
chr19	1807167	1812237	chr19:1807167-1812237	0	-	1807167	1811736	789624	6	99,114,92,62,396,170,	0,1054,2475,3454,4321,4900,
#Partially deleted in new
chr19	1815245	1848463	chr19:1815245-1848463	3	-	1816065	1848358	789624	16	909,121,139,116,111,74,114,138,114,124,132,164,214,105,1754,262,	0,979,1185,1452,1973,2461,3236,3460,3772,4688,5018,6273,8326,10593,11632,32956,
#Deleted in new
chr19	1815248	1815873	chr19:1815248-1815873	3	+	1815248	1815248	8553170	2	338,109,	0,516,
#Deleted in new
chr19	1815969	1819963	chr19:1815969-1819963	0	-	1817443	1819963	789624	10	185,121,139,116,240,74,114,138,114,30,	0,255,461,728,1249,1737,2512,2736,3048,3964,
#Partially deleted in new
chr19	1815969	1822044	chr19:1815969-1822044	1	-	1816065	1821839	789624	12	185,121,139,116,111,74,114,138,114,124,132,526,	0,255,461,728,1249,1737,2512,2736,3048,3964,4294,5549,
#Deleted in new
chr19	1816038	1816387	chr19:1816038-1816387	0	-	1816038	1816038	8553170	2	116,163,	0,186,
#Deleted in new
chr19	1816093	1816765	chr19:1816093-1816765	0	-	1816093	1816093	8553170	2	476,68,	0,604,
#Deleted in new
chr19	1816158	1816238	chr19:1816158-1816238	3	-	1816158	1816158	5263520	1	80,	0,
#Deleted in new
chr19	1817178	1818735	chr19:1817178-1818735	0	-	1817178	1817178	8553170	4	151,74,114,30,	0,528,1303,1527,
#Partially deleted in new
chr19	1818557	1821567	chr19:1818557-1821567	0	-	1820168	1821567	789624	6	38,138,114,247,132,49,	0,148,460,1376,1706,2961,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	1822088	1824542	chr19:1822088-1824542	3	+	1822088	1822088	5263520	3	1169,94,434,	0,1534,2020,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	1822145	1824542	chr19:1822145-1824542	0	+	1822145	1822145	8553170	1	2397,	0,
#Deleted in new
chr19	1822560	1823154	chr19:1822560-1823154	1	+	1822560	1822560	8553170	2	132,140,	0,454,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	1823199	1824542	chr19:1823199-1824542	1	+	1823199	1823199	8553170	3	58,94,325,	0,423,1018,
#Partially deleted in new
chr19	1827647	1848446	chr19:1827647-1848446	0	-	1827647	1827647	8553170	3	984,161,245,	0,3058,20554,
#Deleted in new
chr19	1852381	1853622	chr19:1852381-1853622	3	+	1852381	1852381	8553170	2	69,431,	0,810,
#Deleted in new
chr19	1852398	1863568	chr19:1852398-1863568	3	-	1854458	1863497	789624	2	2362,528,	0,10642,
#Deleted in new
chr19	1852398	1863497	chr19:1852398-1863497	0	-	1854458	1863497	789624	3	197,480,457,	0,1882,10642,
#Deleted in new
chr19	1852399	1863497	chr19:1852399-1863497	1	-	1854458	1863497	789624	3	196,480,457,	0,1881,10641,
#Deleted in new
chr19	1854317	1862858	chr19:1854317-1862858	1	-	1854458	1862839	789624	2	443,65,	0,8476,
#Deleted in new
chr19	1860249	1862019	chr19:1860249-1862019	3	+	1860249	1860249	8553170	3	195,161,251,	0,1224,1519,
#Partially deleted in new
chr19	1874870	1876169	chr19:1874870-1876169	3	-	1874870	1874870	8553170	1	1299,	0,
#Partially deleted in new
chr19	1875015	1875992	chr19:1875015-1875992	3	+	1875015	1875015	8553170	2	194,387,	0,590,
#Partially deleted in new
chr19	1876809	1885547	chr19:1876809-1885547	3	-	1877199	1881566	789624	5	616,180,195,570,196,	0,698,3111,4425,8542,
#Partially deleted in new
chr19	1876975	1885433	chr19:1876975-1885433	1	-	1877199	1881566	789624	6	450,180,195,153,570,82,	0,532,2945,3920,4259,8376,
#Partially deleted in new
chr19	1876976	1883602	chr19:1876976-1883602	0	-	1876976	1876976	8553170	3	449,2608,2368,	0,531,4258,
#Partially deleted in new
chr19	1876976	1883800	chr19:1876976-1883800	0	-	1876976	1876976	8553170	4	449,180,1452,2566,	0,531,1687,4258,
#Partially deleted in new
chr19	1876978	1881585	chr19:1876978-1881585	1	-	1877360	1881566	789624	4	447,140,141,351,	0,529,2942,4256,
#Partially deleted in new
chr19	1877203	1880017	chr19:1877203-1880017	0	-	1878882	1880017	789624	4	222,180,241,97,	0,304,1460,2717,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	1905213	1926011	chr19:1905213-1926011	3	+	1915019	1924284	789624	7	226,48,129,157,102,118,1904,	0,9765,12480,12913,13675,17856,18894,
#Partially deleted in new
chr19	1905371	1919204	chr19:1905371-1919204	0	+	1905371	1905371	8553170	5	68,48,129,157,316,	0,9607,12322,12755,13517,
#Partially deleted in new
chr19	1905377	1913447	chr19:1905377-1913447	3	+	1912047	1913151	789624	2	62,1558,	0,6512,
#Partially deleted in new
chr19	1905377	1925016	chr19:1905377-1925016	0	+	1917818	1924148	789624	6	62,129,157,102,118,909,	0,12316,12749,13511,17692,18730,
#Partially deleted in new
chr19	1905390	1918961	chr19:1905390-1918961	0	+	1915019	1915532	789624	6	49,48,113,129,157,73,	0,9588,10041,12303,12736,13498,
#Partially deleted in new
chr19	1905398	1920743	chr19:1905398-1920743	0	+	1905398	1905398	8553170	6	41,48,129,157,102,96,	0,9580,12295,12728,13490,15249,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	1905399	1907184	chr19:1905399-1907184	0	+	1905399	1905399	8553170	1	1785,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	1905403	1926013	chr19:1905403-1926013	1	+	1915019	1924284	789624	6	36,48,129,157,118,1906,	0,9575,12290,12723,17666,18704,
#Partially deleted in new
chr19	1908018	1912255	chr19:1908018-1912255	0	+	1912047	1912255	789624	2	617,366,	0,3871,
#Partially deleted in new
chr19	1908263	1918965	chr19:1908263-1918965	0	+	1915019	1918965	789624	5	372,48,129,157,77,	0,6715,9430,9863,10625,
#Partially deleted in new
chr19	1908280	1918189	chr19:1908280-1918189	0	+	1917818	1918189	789624	3	355,129,63,	0,9413,9846,
#Partially deleted in new
chr19	1913089	1918161	chr19:1913089-1918161	0	+	1915019	1918161	789624	4	358,48,129,35,	0,1889,4604,5037,
#Partially deleted in new
chr19	1914520	1924701	chr19:1914520-1924701	1	+	1915019	1924284	789624	7	24,48,129,157,102,118,594,	0,458,3173,3606,4368,8549,9587,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	1918643	1922156	chr19:1918643-1922156	0	+	1918643	1918643	8553170	2	16,416,	0,3097,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	1922112	1926005	chr19:1922112-1926005	0	+	1922112	1922112	8553170	2	1075,1898,	0,1995,
#Partially deleted in new
chr19	1941148	1981338	chr19:1941148-1981338	3	+	1969772	1980203	0	12	270,452,41,70,149,235,86,85,149,84,107,1190,	0,28359,37156,37293,37453,37710,38014,38170,38346,38603,38762,39000,
#Partially deleted in new
chr19	1942458	1978345	chr19:1942458-1978345	0	+	1969772	1978345	789624	3	155,452,41,	0,27049,35846,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	1952530	1954549	chr19:1952530-1954549	3	-	1952530	1952530	789624	4	481,121,356,294,	0,855,1312,1725,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	1952588	1954586	chr19:1952588-1954586	0	-	1952588	1952588	8553170	3	423,121,744,	0,797,1254,
#Partially deleted in new
chr19	1954620	1969661	chr19:1954620-1969661	0	+	1954620	1954620	8553170	2	95,154,	0,14887,
#Partially deleted in new
chr19	1954632	1974751	chr19:1954632-1974751	0	+	1969772	1974751	789624	5	83,66,115,452,64,	0,4605,14158,14875,20055,
#Partially deleted in new
chr19	1969825	1979403	chr19:1969825-1979403	0	+	1969825	1979403	789624	6	134,207,149,235,86,85,	0,8479,8776,9033,9337,9493,
#Deleted in new
chr19	1978452	1979403	chr19:1978452-1979403	0	+	1978452	1979403	789624	4	298,235,86,85,	0,406,710,866,
#Deleted in new
chr19	1978452	1979402	chr19:1978452-1979402	0	+	1978452	1979402	789624	3	298,235,84,	0,406,866,
#Deleted in new
chr19	1978474	1979947	chr19:1978474-1979947	0	+	1978474	1978474	8553170	6	37,149,390,85,149,196,	0,127,384,844,1020,1277,
#Deleted in new
chr19	1978933	1980595	chr19:1978933-1980595	0	+	1978933	1978933	8553170	6	315,85,149,84,107,16,	0,385,561,818,977,1646,
#Deleted in new
chr19	1979203	1980667	chr19:1979203-1980667	0	+	1979203	1979917	789624	6	45,85,124,84,107,519,	0,115,291,548,707,945,
#Deleted in new
chr19	1979257	1979756	chr19:1979257-1979756	0	+	1979257	1979756	789624	3	146,149,5,	0,237,494,
#Partially deleted in new
chr19	1985437	2015724	chr19:1985437-2015724	3	-	1986487	2015703	0	9	1212,147,88,193,198,106,157,120,428,	0,1392,1728,2062,4566,5279,7582,11906,29859,
#Partially deleted in new
chr19	1985437	1991300	chr19:1985437-1991300	0	-	1985437	1985437	8553170	6	1212,147,88,193,198,584,	0,1392,1728,2062,4566,5279,
#Deleted in new
chr19	1985437	1988569	chr19:1985437-1988569	0	-	1985437	1985437	8553170	3	1212,147,1404,	0,1392,1728,
#Partially deleted in new
chr19	1986963	1990146	chr19:1986963-1990146	0	-	1986963	1990146	789624	4	13,88,193,55,	0,202,536,3128,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	1987207	1997424	chr19:1987207-1997424	0	-	1987207	1997424	789624	7	46,193,198,106,180,157,81,	0,292,2796,3509,4669,5812,10136,
#Deleted in new
chr19	1989400	1990203	chr19:1989400-1990203	3	+	1989400	1989400	8553170	2	467,194,	0,609,
#Deleted in new
chr19	1989419	1990370	chr19:1989419-1990370	0	-	1989419	1989419	8553170	1	951,	0,
#Deleted in new
chr19	1989689	1991274	chr19:1989689-1991274	0	-	1989689	1989689	8553170	2	512,558,	0,1027,
#Deleted in new
chr19	1989902	1990370	chr19:1989902-1990370	0	+	1989902	1989902	8553170	1	468,	0,
#Partially deleted in new
chr19	1993018	2015542	chr19:1993018-2015542	0	-	2013791	2015542	789624	4	158,120,334,246,	0,4325,20528,22278,
#Partially deleted in new
chr19	1993100	2034881	chr19:1993100-2034881	0	-	1993100	1997426	789624	5	76,120,118,127,131,	0,4243,24082,35607,41650,
#Partially deleted in new
chr19	1997351	2034872	chr19:1997351-2034872	0	-	1997351	1997426	789624	3	112,118,122,	0,19831,37399,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	2002579	2003581	chr19:2002579-2003581	3	-	2002579	2002579	8553170	1	1002,	0,
#Deleted in new
chr19	2013727	2014656	chr19:2013727-2014656	7	-	2013727	2013727	16724991	1	929,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	2030852	2031051	chr19:2030852-2031051	7	-	2030852	2030852	16724991	1	199,	0,
#Partially deleted in new
chr19	2037464	2051224	chr19:2037464-2051224	1	-	2037738	2050851	0	14	365,44,165,195,96,56,105,74,80,98,102,88,147,129,	0,2669,3575,4375,4962,5142,5301,5659,6038,8721,8902,9139,13336,13631,
#Deleted in new
chr19	2037464	2041842	chr19:2037464-2041842	0	-	2041077	2041842	789624	5	365,226,44,165,3,	0,2166,2669,3575,4375,
#Deleted in new
chr19	2037464	2042140	chr19:2037464-2042140	1	-	2037738	2042016	789624	4	365,44,165,301,	0,2669,3575,4375,
#Partially deleted in new
chr19	2037464	2050887	chr19:2037464-2050887	1	-	2039612	2050851	0	13	2392,44,165,195,96,56,105,74,80,98,102,88,87,	0,2669,3575,4375,4962,5142,5301,5659,6038,8721,8902,9139,13336,
#Deleted in new
chr19	2037472	2042676	chr19:2037472-2042676	0	-	2037472	2037472	8553170	4	3732,195,96,70,	0,4367,4954,5134,
#Partially deleted in new
chr19	2037481	2051244	chr19:2037481-2051244	3	-	2039612	2050851	0	14	2375,44,165,195,96,56,105,74,80,98,102,88,147,149,	0,2652,3558,4358,4945,5125,5284,5642,6021,8704,8885,9122,13319,13614,
#Deleted in new
chr19	2038247	2042633	chr19:2038247-2042633	0	-	2040129	2042633	789624	5	1930,165,195,96,27,	0,2792,3592,4179,4359,
#Partially deleted in new
chr19	2039411	2050853	chr19:2039411-2050853	0	-	2043574	2050851	789624	12	445,44,165,195,96,56,105,74,80,102,88,53,	0,722,1628,2428,3015,3195,3354,3712,4091,6955,7192,11389,
#Deleted in new
chr19	2039954	2042082	chr19:2039954-2042082	1	-	2040129	2042016	789624	3	223,165,243,	0,1085,1885,
#Deleted in new
chr19	2040131	2043532	chr19:2040131-2043532	0	-	2040131	2040131	8553170	7	46,165,195,96,264,74,30,	0,908,1708,2295,2475,2992,3371,
#Deleted in new
chr19	2040308	2042078	chr19:2040308-2042078	0	-	2040308	2040308	8553170	2	896,239,	0,1531,
#Partially deleted in new
chr19	2046460	2051244	chr19:2046460-2051244	0	-	2046460	2050851	789624	4	8,170,147,27,	0,61,4340,4757,
#Partially deleted in new
chr19	2046521	2051232	chr19:2046521-2051232	0	-	2046521	2050851	789624	3	170,147,137,	0,4279,4574,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	2071037	2096332	chr19:2071037-2096332	3	-	2073394	2078560	789624	5	2387,203,540,154,107,	0,5773,7102,14137,25188,
#Partially deleted in new
chr19	2073034	2085342	chr19:2073034-2085342	0	-	2073034	2073034	8553170	2	390,168,	0,12140,
#Partially deleted in new
chr19	2073136	2078719	chr19:2073136-2078719	1	-	2073394	2078560	789624	3	288,203,580,	0,3674,5003,
#Partially deleted in new
chr19	2078330	2085392	chr19:2078330-2085392	0	-	2078330	2078560	789624	2	349,218,	0,6844,
#Partially deleted in new
chr19	2078371	2090176	chr19:2078371-2090176	0	-	2078371	2078560	789624	3	308,154,102,	0,6803,11703,
#Partially deleted in new
chr19	2078373	2096479	chr19:2078373-2096479	0	-	2078373	2078560	789624	3	306,151,99,	0,6801,18007,
#Partially deleted in new
chr19	2078396	2096673	chr19:2078396-2096673	0	-	2078396	2078560	789624	3	283,154,293,	0,6778,17984,
#Partially deleted in new
chr19	2078445	2085652	chr19:2078445-2085652	0	-	2078445	2078560	789624	3	234,154,176,	0,6729,7031,
#Partially deleted in new
chr19	2078510	2096270	chr19:2078510-2096270	0	-	2078510	2078560	789624	4	169,154,83,45,	0,6664,16730,17715,
#Deleted in new
chr19	2096428	2098106	chr19:2096428-2098106	0	+	2096428	2096428	8553170	4	734,81,72,178,	0,823,995,1500,
#Deleted in new
chr19	2096858	2099593	chr19:2096858-2099593	0	+	2096858	2096858	8553170	6	304,81,72,27,283,1158,	0,393,565,1070,1193,1577,
#Deleted in new
chr19	2096858	2099584	chr19:2096858-2099584	0	+	2096858	2096858	8553170	7	304,81,72,228,27,283,1149,	0,393,565,726,1070,1193,1577,
#Deleted in new
chr19	2096868	2099590	chr19:2096868-2099590	1	+	2096945	2099345	789624	10	294,81,72,27,76,48,15,18,54,336,	0,383,555,1060,1183,1418,1567,1918,2107,2386,
#Deleted in new
chr19	2096881	2099580	chr19:2096881-2099580	3	+	2096945	2099345	789624	9	281,81,72,27,76,48,15,18,326,	0,370,542,1047,1170,1405,1554,1905,2373,
#Deleted in new
chr19	2096892	2099110	chr19:2096892-2099110	0	+	2096892	2096892	8553170	7	270,244,199,48,15,18,135,	0,359,1036,1394,1543,1894,2083,
#Deleted in new
chr19	2096914	2098334	chr19:2096914-2098334	0	+	2096914	2096914	8553170	4	248,81,72,406,	0,337,509,1014,
#Deleted in new
chr19	2096930	2098831	chr19:2096930-2098831	1	+	2096945	2098454	789624	5	232,244,27,48,396,	0,321,998,1356,1505,
#Deleted in new
chr19	2096942	2099584	chr19:2096942-2099584	1	+	2096945	2099345	789624	8	220,81,72,27,76,48,15,330,	0,309,481,986,1109,1344,1493,2312,
#Deleted in new
chr19	2096997	2098830	chr19:2096997-2098830	0	+	2096997	2098121	789624	7	165,81,72,27,76,48,395,	0,254,426,931,1054,1289,1438,
#Deleted in new
chr19	2097006	2099086	chr19:2097006-2099086	0	+	2097006	2099033	789624	7	156,81,72,27,48,15,111,	0,245,417,922,1280,1429,1969,
#Deleted in new
chr19	2097086	2099593	chr19:2097086-2099593	0	+	2097086	2099345	789624	7	76,81,72,76,48,15,339,	0,165,337,965,1200,1349,2168,
#Deleted in new
chr19	2098901	2099588	chr19:2098901-2099588	0	+	2098901	2098901	8553170	2	128,334,	0,353,
#Partially deleted in new
chr19	2100987	2151557	chr19:2100987-2151557	3	-	2102172	2151334	0	30	1281,80,122,86,89,190,48,150,178,74,200,76,72,142,146,232,231,149,146,49,50,50,74,140,130,108,81,81,96,319,	0,7699,8098,8885,9148,9719,10297,10691,13137,13760,14231,14550,15219,15617,16234,17613,19874,20175,20746,22370,22842,26164,28102,28330,29420,31483,36023,36739,37631,50251,
#Partially deleted in new
chr19	2100987	2151566	chr19:2100987-2151566	1	-	2102172	2151334	0	32	1281,80,122,86,89,190,48,150,108,78,178,74,200,76,72,142,146,232,231,149,146,49,50,50,74,140,130,108,81,81,96,328,	0,7699,8098,8885,9148,9719,10297,10691,11872,12348,13137,13760,14231,14550,15219,15617,16234,17613,19874,20175,20746,22370,22842,26164,28102,28330,29420,31483,36023,36739,37631,50251,
#Partially deleted in new
chr19	2100988	2112406	chr19:2100988-2112406	0	-	2100988	2100988	8553170	6	1280,80,122,86,89,1700,	0,7698,8097,8884,9147,9718,
#Partially deleted in new
chr19	2100993	2151541	chr19:2100993-2151541	1	-	2102172	2151334	0	32	1275,80,122,86,89,190,48,150,108,78,178,74,200,76,72,142,146,232,231,149,146,49,50,50,74,140,130,108,81,81,96,303,	0,7693,8092,8879,9142,9713,10291,10685,11866,12342,13131,13754,14225,14544,15213,15611,16228,17607,19868,20169,20740,22364,22836,26158,28096,28324,29414,31477,36017,36733,37625,50245,
#Partially deleted in new
chr19	2100994	2112823	chr19:2100994-2112823	0	-	2100994	2100994	8553170	5	1274,80,873,89,2117,	0,7692,8091,9141,9712,
#Partially deleted in new
chr19	2100995	2129121	chr19:2100995-2129121	0	-	2102172	2129121	789624	25	1273,80,122,86,89,190,48,150,72,78,178,74,200,76,72,142,146,232,231,149,146,49,50,50,32,	0,7691,8090,8877,9140,9711,10289,10683,11864,12340,13129,13752,14223,14542,15211,15609,16226,17605,19866,20167,20738,22362,22834,26156,28094,
#Partially deleted in new
chr19	2101112	2111329	chr19:2101112-2111329	0	-	2108691	2111329	789624	7	1156,80,40,86,89,190,45,	0,7574,7973,8760,9023,9594,10172,
#Partially deleted in new
chr19	2101620	2111506	chr19:2101620-2111506	0	-	2101620	2101620	8553170	7	648,80,122,86,89,190,222,	0,7066,7465,8252,8515,9086,9664,
#Partially deleted in new
chr19	2102236	2110805	chr19:2102236-2110805	0	-	2108691	2110805	789624	6	32,190,122,86,89,99,	0,6450,6849,7636,7899,8470,
#Deleted in new
chr19	2111790	2114239	chr19:2111790-2114239	0	-	2111790	2111790	8553170	3	38,554,115,	0,1069,2334,
#Partially deleted in new
chr19	2115346	2120867	chr19:2115346-2120867	0	-	2115346	2115346	8553170	7	72,76,72,192,146,232,6,	0,191,860,1258,1875,3254,5515,
#Partially deleted in new
chr19	2116766	2118626	chr19:2116766-2118626	0	-	2116766	2116766	8553170	2	601,26,	0,1834,
#Partially deleted in new
chr19	2118820	2164468	chr19:2118820-2164468	0	-	2118820	2137801	789624	15	12,231,149,146,49,50,50,74,140,130,108,81,81,96,113,	0,2041,2342,2913,4537,5009,8331,10269,10497,11587,13650,18190,18906,19798,45535,
#Partially deleted in new
chr19	2121048	2130478	chr19:2121048-2130478	0	-	2121231	2130478	789624	8	44,149,146,49,50,74,140,71,	0,114,685,2309,2781,8041,8269,9359,
#Partially deleted in new
chr19	2130521	2164465	chr19:2130521-2164465	0	-	2133454	2137801	789624	7	16,108,88,81,81,96,110,	0,1949,2875,6489,7205,8097,33834,
#Partially deleted in new
chr19	2164148	2232578	chr19:2164148-2232578	3	+	2164184	2229792	789624	28	117,44,75,64,229,95,63,56,80,69,107,42,111,235,114,92,102,138,126,485,136,147,115,584,206,65,945,2794,	0,16564,21706,25583,26863,29540,30366,35735,38551,42580,43425,44786,46251,46472,46950,47602,49390,49700,50322,52132,52806,53623,55959,57827,59132,61239,62034,65636,
#Partially deleted in new
chr19	2164184	2199928	chr19:2164184-2199928	0	+	2164184	2199928	789624	8	81,44,75,64,157,95,63,45,	0,16528,21670,25547,26899,29504,30330,35699,
#Partially deleted in new
chr19	2164197	2191305	chr19:2164197-2191305	0	+	2164197	2188218	789624	6	68,44,75,93,64,294,	0,16515,21657,23999,25534,26814,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	2212028	2215565	chr19:2212028-2215565	3	-	2212028	2212028	8553170	2	2666,72,	0,3465,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	2212236	2214572	chr19:2212236-2214572	0	+	2212236	2212236	8553170	4	225,102,138,102,	0,1302,1612,2234,
#Partially deleted in new
chr19	2213589	2215867	chr19:2213589-2215867	0	+	2213589	2215571	789624	4	51,138,126,410,	0,259,881,1868,
#Partially deleted in new
chr19	2214127	2216629	chr19:2214127-2216629	0	+	2214127	2214127	8553170	3	101,126,349,	0,343,2153,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	2216165	2222882	chr19:2216165-2222882	0	+	2216165	2216165	8553170	4	600,136,147,2775,	0,789,1606,3942,
#Partially deleted in new
chr19	2222529	2230694	chr19:2222529-2230694	0	+	2222529	2228347	789624	7	30,206,65,945,105,646,910,	0,751,2858,3653,4833,5207,7255,
#Deleted in new
chr19	2226916	2227901	chr19:2226916-2227901	0	+	2226916	2227901	789624	2	211,165,	0,820,
#Partially deleted in new
chr19	2230083	2236272	chr19:2230083-2236272	1	-	2230162	2236248	789624	6	529,64,91,67,68,118,	0,3914,4066,5678,5839,6071,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	2233148	2236326	chr19:2233148-2236326	1	-	2233856	2236248	789624	5	913,91,67,68,172,	0,1001,2613,2774,3006,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	2233152	2237704	chr19:2233152-2237704	3	-	2233839	2236248	789624	7	753,64,91,67,68,798,410,	0,845,997,2609,2770,3002,4142,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	2233152	2236294	chr19:2233152-2236294	1	-	2234005	2236248	789624	5	753,64,67,68,140,	0,845,2609,2770,3002,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	2233153	2236263	chr19:2233153-2236263	0	-	2233153	2233153	8553170	3	908,1841,109,	0,996,3001,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	2233154	2236665	chr19:2233154-2236665	0	-	2233154	2233154	8553170	6	751,64,91,67,68,288,	0,843,995,2607,2768,3223,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	2233155	2236320	chr19:2233155-2236320	1	-	2233839	2236248	789624	6	750,64,91,67,68,166,	0,842,994,2606,2767,2999,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	2233320	2233832	chr19:2233320-2233832	0	-	2233320	2233320	8553170	2	77,302,	0,210,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	2233354	2234331	chr19:2233354-2234331	0	-	2233354	2233354	8553170	2	707,182,	0,795,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	2233407	2236298	chr19:2233407-2236298	1	-	2233839	2236248	789624	4	498,64,229,144,	0,590,2354,2747,
#Partially deleted in new
chr19	2233852	2236141	chr19:2233852-2236141	0	-	2233852	2233852	8553170	5	53,64,91,67,219,	0,145,297,1909,2070,
#Partially deleted in new
chr19	2233963	2236239	chr19:2233963-2236239	0	-	2233963	2233963	8553170	4	98,91,67,317,	0,186,1798,1959,
#Deleted in new
chr19	2234061	2234149	chr19:2234061-2234149	3	-	2234061	2234061	5263520	1	88,	0,
#Partially deleted in new
chr19	2235462	2236330	chr19:2235462-2236330	0	-	2235462	2235462	8553170	3	366,68,176,	0,460,692,
#Partially deleted in new
chr19	2235828	2235926	chr19:2235828-2235926	3	-	2235828	2235828	5263520	1	98,	0,
#Partially deleted in new
chr19	2236503	2248679	chr19:2236503-2248679	3	+	2243418	2248546	789624	9	398,163,72,47,110,50,141,69,913,	0,6878,8040,8229,8942,10249,10378,11090,11263,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	2236831	2245186	chr19:2236831-2245186	0	+	2236831	2236831	8553170	4	70,163,72,454,	0,6550,7712,7901,
#Partially deleted in new
chr19	2236852	2245838	chr19:2236852-2245838	0	+	2236852	2236852	8553170	5	49,163,72,47,393,	0,6529,7691,7880,8593,
#Partially deleted in new
chr19	2236859	2247878	chr19:2236859-2247878	0	+	2236859	2236859	8553170	8	42,163,72,47,110,270,69,112,	0,6522,7684,7873,8586,9893,10734,10907,
#Partially deleted in new
chr19	2237793	2246802	chr19:2237793-2246802	0	+	2243418	2246802	789624	6	101,163,72,47,110,50,	0,5588,6750,6939,7652,8959,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	2243381	2244953	chr19:2243381-2244953	0	+	2243381	2243381	8553170	2	163,410,	0,1162,
#Deleted in new
chr19	2245508	2247206	chr19:2245508-2247206	0	+	2245508	2245508	8553170	2	47,454,	0,1244,
#Deleted in new
chr19	2249308	2250749	chr19:2249308-2250749	0	+	2249308	2249308	8553170	2	436,98,	0,1343,
#Deleted in new
chr19	2249310	2252073	chr19:2249310-2252073	3	+	2249332	2251957	789624	5	434,143,109,160,975,	0,1026,1341,1538,1788,
#Deleted in new
chr19	2249743	2251607	chr19:2249743-2251607	0	+	2249743	2249743	8553170	3	1017,160,509,	0,1105,1355,
#Deleted in new
chr19	2250638	2250718	chr19:2250638-2250718	3	+	2250638	2250638	5263520	1	80,	0,
#Partially deleted in new
chr19	2252251	2256417	chr19:2252251-2256417	3	-	2252328	2255314	789624	7	545,92,174,115,38,139,35,	0,660,1368,1935,2193,2954,4131,
#Partially deleted in new
chr19	2253668	2269759	chr19:2253668-2269759	0	-	2253668	2253668	8553170	5	125,115,38,139,426,	0,518,776,1537,15665,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	2268486	2269408	chr19:2268486-2269408	0	-	2268486	2268486	8553170	2	386,75,	0,847,
#Partially deleted in new
chr19	2269508	2273488	chr19:2269508-2273488	0	+	2269598	2271794	789624	4	236,173,86,517,	0,2273,3226,3463,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	2269514	2272262	chr19:2269514-2272262	0	+	2269514	2269514	8553170	3	230,146,481,	0,1870,2267,
#Partially deleted in new
chr19	2269519	2273221	chr19:2269519-2273221	0	+	2269519	2269519	8553170	4	225,570,86,250,	0,1865,3215,3452,
#Partially deleted in new
chr19	2269519	2273490	chr19:2269519-2273490	3	+	2269598	2273108	0	6	225,58,87,173,86,519,	0,1865,1924,2262,3215,3452,
#Partially deleted in new
chr19	2269524	2341172	chr19:2269524-2341172	3	+	2269598	2337569	789624	8	220,120,183,90,140,143,97,275,	0,65077,67918,69227,69544,70299,70551,71373,
#Partially deleted in new
chr19	2269533	2273331	chr19:2269533-2273331	1	+	2269598	2273108	789624	6	211,52,87,173,86,360,	0,1857,1910,2248,3201,3438,
#Partially deleted in new
chr19	2269548	2273325	chr19:2269548-2273325	0	+	2269548	2269548	8553170	3	196,570,591,	0,1836,3186,
#Partially deleted in new
chr19	2270290	2272809	chr19:2270290-2272809	0	+	2270444	2272809	789624	4	386,146,173,75,	0,1094,1491,2444,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	2270656	2273488	chr19:2270656-2273488	0	+	2270656	2270656	8553170	1	2832,	0,
#Partially deleted in new
chr19	2271318	2272777	chr19:2271318-2272777	0	+	2271318	2271318	8553170	2	636,43,	0,1416,
#Partially deleted in new
chr19	2271361	2273269	chr19:2271361-2273269	0	+	2271361	2271361	8553170	4	169,173,86,298,	0,420,1373,1610,
#Deleted in new
chr19	2272523	2273331	chr19:2272523-2273331	0	+	2272523	2272523	8553170	2	297,360,	0,448,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	2274621	2282176	chr19:2274621-2282176	3	-	2275679	2280931	789624	4	1868,530,86,90,	0,3962,6228,7465,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	2289783	2292024	chr19:2289783-2292024	3	-	2289997	2291776	789624	1	2241,	0,
#Partially deleted in new
chr19	2321516	2328620	chr19:2321516-2328620	3	-	2321679	2328566	0	4	306,72,91,60,	0,2608,6870,7044,
#Partially deleted in new
chr19	2321519	2328586	chr19:2321519-2328586	1	-	2321679	2324131	789624	3	303,72,200,	0,2605,6867,
#Partially deleted in new
chr19	2321520	2328477	chr19:2321520-2328477	0	-	2326047	2328477	789624	4	302,68,160,91,	0,2604,4459,6866,
#Partially deleted in new
chr19	2321520	2328611	chr19:2321520-2328611	1	-	2324181	2328566	789624	4	302,68,91,51,	0,2604,6866,7040,
#Partially deleted in new
chr19	2321520	2324906	chr19:2321520-2324906	0	-	2321520	2321520	8553170	3	302,72,165,	0,2604,3221,
#Partially deleted in new
chr19	2321520	2324532	chr19:2321520-2324532	0	-	2321520	2321520	8553170	2	302,408,	0,2604,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	2327961	2328587	chr19:2327961-2328587	0	-	2327961	2327961	8553170	2	516,27,	0,599,
#Partially deleted in new
chr19	2328614	2338526	chr19:2328614-2338526	0	+	2328614	2328614	8553170	2	107,476,	0,9436,
#Partially deleted in new
chr19	2328629	2354806	chr19:2328629-2354806	3	+	2328709	2353209	789624	15	146,120,183,90,140,143,97,117,82,75,63,100,78,161,1861,	0,5972,8813,10122,10439,11194,11446,12268,14581,15335,15732,15923,16623,22804,24316,
#Partially deleted in new
chr19	2328658	2337482	chr19:2328658-2337482	0	+	2328709	2337174	789624	4	117,120,219,40,	0,5943,8456,8784,
#Partially deleted in new
chr19	2328672	2343292	chr19:2328672-2343292	0	+	2328709	2339087	789624	9	103,120,183,28,144,143,97,117,82,	0,5929,8770,10141,10392,11151,11403,12225,14538,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	2328683	2341468	chr19:2328683-2341468	1	+	2334619	2341018	789624	9	92,123,120,183,90,140,143,97,571,	0,1613,5918,8759,10068,10385,11140,11392,12214,
#Partially deleted in new
chr19	2328692	2353933	chr19:2328692-2353933	1	+	2328709	2351615	789624	15	83,120,183,90,140,143,97,117,82,75,63,100,78,224,988,	0,5909,8750,10059,10376,11131,11383,12205,14518,15272,15669,15860,16560,22741,24253,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	2328695	2342503	chr19:2328695-2342503	1	+	2328709	2341018	789624	8	80,120,183,90,140,143,97,1606,	0,5906,8747,10056,10373,11128,11380,12202,
#Deleted in new
chr19	2334628	2337935	chr19:2334628-2337935	0	+	2334628	2334628	8553170	2	93,493,	0,2814,
#Deleted in new
chr19	2337110	2339877	chr19:2337110-2339877	0	+	2337110	2337110	8553170	5	84,183,90,140,54,	0,332,1641,1958,2713,
#Deleted in new
chr19	2338759	2341187	chr19:2338759-2341187	0	+	2338759	2338759	8553170	5	82,140,140,97,290,	0,309,1067,1316,2138,
#Partially deleted in new
chr19	2339157	2343972	chr19:2339157-2343972	0	+	2339157	2343972	789624	6	51,140,97,117,82,8,	0,669,918,1740,4053,4807,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	2339677	2341956	chr19:2339677-2341956	0	+	2339677	2339677	8553170	3	289,97,1025,	0,398,1254,
#Partially deleted in new
chr19	2342721	2353567	chr19:2342721-2353567	0	+	2342721	2342721	8553170	7	571,75,63,100,78,224,622,	0,1243,1640,1831,2531,8712,10224,
#Partially deleted in new
chr19	2360237	2426239	chr19:2360237-2426239	3	+	2389785	2426088	8553170	18	123,167,128,142,42,114,172,275,137,319,172,272,137,394,169,266,137,313,	0,29523,36301,38814,41737,42844,45136,48118,50020,53462,55432,56300,57764,61616,63851,64764,65119,65689,
#Partially deleted in new
chr19	2389760	2426239	chr19:2389760-2426239	1	+	2389785	2426088	8553170	18	167,128,68,176,42,114,172,275,137,319,172,272,137,394,169,266,137,313,	0,6778,9034,9257,12214,13321,15613,18595,20497,23939,25909,26777,28241,32093,34328,35241,35596,36166,
#Partially deleted in new
chr19	2389770	2414203	chr19:2389770-2414203	0	+	2389770	2389770	8553170	10	157,128,68,176,42,114,172,275,137,504,	0,6768,9024,9247,12204,13311,15603,18585,20487,23929,
#Partially deleted in new
chr19	2389785	2426088	chr19:2389785-2426088	1	+	2389785	2426088	789624	17	142,128,142,42,114,172,275,137,319,172,272,137,394,169,266,137,162,	0,6753,9266,12189,13296,15588,18570,20472,23914,25884,26752,28216,32068,34303,35216,35571,36141,
#Partially deleted in new
chr19	2389785	2425036	chr19:2389785-2425036	1	+	2389785	2425036	789624	16	142,128,142,42,114,172,275,137,319,172,272,137,394,18,69,35,	0,6753,9266,12189,13296,15588,18570,20472,23914,25884,26752,28216,32068,34303,34403,35216,
#Partially deleted in new
chr19	2396177	2398822	chr19:2396177-2398822	0	+	2396177	2396177	8553170	3	267,111,28,	0,378,2617,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	2416242	2418026	chr19:2416242-2418026	0	+	2416242	2416242	8553170	2	567,25,	0,1759,
#Deleted in new
chr19	2425623	2427894	chr19:2425623-2427894	3	-	2426947	2427533	789624	3	1423,69,481,	0,1632,1790,
#Deleted in new
chr19	2426564	2427538	chr19:2426564-2427538	1	-	2426947	2427533	789624	3	482,69,80,	0,691,894,
#Deleted in new
chr19	2427637	2433899	chr19:2427637-2433899	0	-	2427637	2427637	8553170	5	356,111,120,108,74,	0,3910,4145,4778,6188,
#Partially deleted in new
chr19	2428165	2456996	chr19:2428165-2456996	3	-	2430910	2456933	0	12	2787,111,120,108,280,221,126,171,126,157,137,327,	0,3382,3617,4250,5660,6129,6622,6835,9997,10209,16238,28504,
#Deleted in new
chr19	2429470	2431829	chr19:2429470-2431829	0	-	2429470	2429470	8553170	2	838,47,	0,2312,
#Deleted in new
chr19	2432507	2434959	chr19:2432507-2434959	0	-	2432507	2432507	8553170	4	16,280,221,172,	0,1318,1787,2280,
#Partially deleted in new
chr19	2434294	2437158	chr19:2434294-2437158	0	-	2434294	2434294	8553170	4	221,126,171,320,	0,493,706,2544,
#Deleted in new
chr19	2434913	2435000	chr19:2434913-2435000	3	-	2434913	2434913	5263520	1	87,	0,
#Partially deleted in new
chr19	2435002	2437121	chr19:2435002-2437121	0	-	2435002	2435002	8553170	2	169,322,	0,1797,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	2458934	2462185	chr19:2458934-2462185	3	-	2458934	2458934	789624	2	166,205,	0,3046,
#Deleted in new
chr19	2476121	2476638	chr19:2476121-2476638	0	+	2476121	2476121	8553170	1	517,	0,
#Deleted in new
chr19	2476126	2478259	chr19:2476126-2478259	3	+	2476358	2477601	789624	4	276,102,223,772,	0,402,902,1361,
#Deleted in new
chr19	2476126	2478259	chr19:2476126-2478259	0	+	2476126	2476126	8553170	2	276,1731,	0,402,
#Deleted in new
chr19	2476145	2477657	chr19:2476145-2477657	0	+	2476358	2477067	789624	4	257,100,223,170,	0,383,883,1342,
#Deleted in new
chr19	2476147	2477436	chr19:2476147-2477436	1	+	2476358	2477413	789624	3	255,102,408,	0,381,881,
#Deleted in new
chr19	2476355	2477126	chr19:2476355-2477126	0	+	2476529	2477126	789624	3	76,102,98,	0,173,673,
#Deleted in new
chr19	2476355	2477126	chr19:2476355-2477126	0	+	2476529	2477126	789624	2	275,98,	0,673,
#Deleted in new
chr19	2503046	2503141	chr19:2503046-2503141	3	-	2503046	2503046	8553170	1	95,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	2511218	2702709	chr19:2511218-2702709	3	-	2515021	2520688	789624	5	3929,118,40,57,64,	0,9389,43930,135005,191427,
#Partially deleted in new
chr19	2514992	2683691	chr19:2514992-2683691	0	-	2517052	2520688	789624	6	155,141,118,40,57,212,	0,1949,5615,40156,131231,168487,
#Partially deleted in new
chr19	2538111	2538754	chr19:2538111-2538754	7	+	2538111	2538111	16724991	2	211,106,	0,537,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	2595018	2595291	chr19:2595018-2595291	3	-	2595018	2595018	8553170	1	273,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	2610154	2611862	chr19:2610154-2611862	3	-	2610154	2610154	8553170	1	1708,	0,
#Deleted in new
chr19	2630714	2630793	chr19:2630714-2630793	3	+	2630714	2630714	5263520	1	79,	0,
#Partially deleted in new
chr19	2631953	2632849	chr19:2631953-2632849	3	+	2631953	2631953	8553170	2	180,274,	0,622,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	2641837	2643853	chr19:2641837-2643853	3	-	2641837	2641837	8553170	1	2016,	0,
#Partially deleted in new
chr19	2700688	2701266	chr19:2700688-2701266	3	-	2700688	2700688	8553170	1	578,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	2714566	2721418	chr19:2714566-2721418	3	-	2717209	2717806	0	2	3309,115,	0,6737,
#Deleted in new
chr19	2717131	2717905	chr19:2717131-2717905	1	-	2717209	2717806	0	1	774,	0,
#Partially deleted in new
chr19	2717398	2721341	chr19:2717398-2721341	0	-	2717398	2717806	789624	3	477,31,38,	0,1753,3905,
#Partially deleted in new
chr19	2717768	2740048	chr19:2717768-2740048	3	-	2717768	2737257	789624	3	107,332,104,	0,19279,22176,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	2727742	2729327	chr19:2727742-2729327	3	-	2727742	2727742	8553170	1	1585,	0,
#Partially deleted in new
chr19	2732203	2740017	chr19:2732203-2740017	1	-	2732255	2737257	789624	4	83,731,332,73,	0,551,4844,7741,
#Partially deleted in new
chr19	2732523	2740152	chr19:2732523-2740152	3	-	2732750	2737257	789624	3	962,332,208,	0,4524,7421,
#Partially deleted in new
chr19	2733287	2740017	chr19:2733287-2740017	0	-	2733287	2737257	789624	3	198,253,73,	0,3760,6657,
#Partially deleted in new
chr19	2733372	2739475	chr19:2733372-2739475	0	-	2733372	2737257	789624	3	113,332,46,	0,3675,6057,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	2734523	2740028	chr19:2734523-2740028	1	-	2736939	2737257	789624	2	2856,84,	0,5421,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	2737277	2740017	chr19:2737277-2740017	0	-	2737277	2737277	8553170	2	499,73,	0,2667,
#Partially deleted in new
chr19	2754713	2783371	chr19:2754713-2783371	3	-	2757342	2769068	0	12	1220,121,90,38,63,139,105,100,85,107,123,139,	0,2623,2979,4543,6746,7792,8939,10472,12422,12866,14255,28519,
#Partially deleted in new
chr19	2755548	2759542	chr19:2755548-2759542	0	-	2755548	2755548	8553170	4	385,121,90,286,	0,1788,2144,3708,
#Partially deleted in new
chr19	2763662	2783270	chr19:2763662-2783270	0	-	2763662	2769068	789624	7	95,100,85,107,123,89,38,	0,1523,3473,3917,5306,18907,19570,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	2767581	2770781	chr19:2767581-2770781	0	-	2767581	2769068	789624	3	105,123,613,	0,1387,2587,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	2777492	2783282	chr19:2777492-2783282	0	-	2777492	2777492	8553170	2	521,50,	0,5740,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	2785459	2815807	chr19:2785459-2815807	3	+	2785662	2813276	0	13	219,213,149,108,103,161,136,367,202,187,129,137,2693,	0,4961,9304,10621,14229,19556,21457,21982,22783,24844,25180,26138,27655,
#Partially deleted in new
chr19	2785513	2804656	chr19:2785513-2804656	0	+	2785513	2785513	8553170	6	165,213,149,108,103,46,	0,4907,9250,10567,14175,19097,
#Partially deleted in new
chr19	2785566	2794888	chr19:2785566-2794888	0	+	2785566	2785566	8553170	3	112,213,96,	0,4854,9226,
#Partially deleted in new
chr19	2796006	2813382	chr19:2796006-2813382	1	+	2796065	2813276	789624	10	182,103,161,136,367,202,187,129,137,268,	0,3682,9009,10910,11435,12236,14297,14633,15591,17108,
#Partially deleted in new
chr19	2806016	2813599	chr19:2806016-2813599	0	+	2806016	2806016	8553170	6	1036,1003,187,129,137,485,	0,1425,4287,4623,5581,7098,
#Partially deleted in new
chr19	2806984	2810490	chr19:2806984-2810490	0	+	2806984	2806984	8553170	4	68,332,202,187,	0,457,1258,3319,
#Partially deleted in new
chr19	2807571	2810508	chr19:2807571-2810508	0	+	2807571	2807571	8553170	3	209,202,205,	0,671,2732,
#Partially deleted in new
chr19	2807685	2813599	chr19:2807685-2813599	0	+	2807685	2813573	789624	5	123,202,187,23,104,	0,557,2618,2954,5810,
#Partially deleted in new
chr19	2808242	2813599	chr19:2808242-2813599	0	+	2808242	2813276	789624	5	202,187,129,101,485,	0,2061,2397,3391,4872,
#Partially deleted in new
chr19	2808357	2812188	chr19:2808357-2812188	0	+	2808357	2812137	789624	5	87,187,129,137,162,	0,1946,2282,3240,3669,
#Deleted in new
chr19	2809537	2813598	chr19:2809537-2813598	1	+	2810315	2813276	0	5	953,129,137,174,484,	0,1102,2060,2661,3577,
#Deleted in new
chr19	2809845	2810481	chr19:2809845-2810481	0	+	2809845	2809845	8553170	2	253,178,	0,458,
#Deleted in new
chr19	2810152	2813181	chr19:2810152-2813181	0	+	2810315	2813181	789624	4	338,129,137,67,	0,487,1445,2962,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	2819873	2835773	chr19:2819873-2835773	3	+	2820071	2834852	789624	5	251,73,127,192,2093,	0,3166,7743,12429,13807,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	2819918	2835471	chr19:2819918-2835471	0	+	2820071	2826330	789624	6	206,73,97,127,192,1791,	0,3121,6331,7698,12384,13762,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	2819949	2834154	chr19:2819949-2834154	1	+	2820071	2833263	789624	6	175,73,127,192,107,474,	0,3090,7667,12353,13213,13731,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	2830557	2835772	chr19:2830557-2835772	0	+	2830557	2830557	8553170	2	1937,2092,	0,3123,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	2841434	2860484	chr19:2841434-2860484	3	+	2841572	2853952	789624	4	141,127,184,8105,	0,9152,10033,10945,
#Partially deleted in new
chr19	2841436	2852496	chr19:2841436-2852496	0	+	2850679	2852496	789624	4	47,127,184,117,	0,9150,10031,10943,
#Partially deleted in new
chr19	2841443	2854209	chr19:2841443-2854209	1	+	2841572	2853952	789624	4	132,127,184,1827,	0,9143,10024,10939,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	2847226	2858716	chr19:2847226-2858716	3	-	2847226	2847226	8553170	2	158,397,	0,11093,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	2867334	2883445	chr19:2867334-2883445	3	+	2867421	2878329	789624	4	90,127,184,6173,	0,6161,8758,9938,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	2867334	2878517	chr19:2867334-2878517	1	+	2867421	2878329	789624	4	90,127,184,1242,	0,6161,8758,9941,
#Partially deleted in new
chr19	2867334	2877442	chr19:2867334-2877442	0	+	2867421	2876176	789624	4	90,123,184,170,	0,6161,8758,9938,
#Partially deleted in new
chr19	2874949	2875592	chr19:2874949-2875592	7	-	2874949	2874949	16724991	2	241,85,	0,558,
#Deleted in new
chr19	2896624	2897222	chr19:2896624-2897222	7	-	2896624	2896624	16724991	1	598,	0,
#Partially deleted in new
chr19	2900897	2918476	chr19:2900897-2918476	3	+	2901045	2918289	789624	4	151,127,172,1553,	0,14624,15180,16026,
#Partially deleted in new
chr19	2907107	2917159	chr19:2907107-2917159	0	+	2915614	2917159	789624	5	52,126,127,172,236,	0,5028,8414,8970,9816,
#Partially deleted in new
chr19	2907107	2918346	chr19:2907107-2918346	1	+	2915614	2918289	789624	4	52,127,172,1423,	0,8414,8970,9816,
#Partially deleted in new
chr19	2915145	2926807	chr19:2915145-2926807	3	-	2915145	2915145	8553170	3	563,102,111,	0,1859,11551,
#Partially deleted in new
chr19	2915444	2917170	chr19:2915444-2917170	0	+	2915614	2917170	789624	3	204,172,247,	0,633,1479,
#Partially deleted in new
chr19	2933217	2944933	chr19:2933217-2944933	3	-	2933488	2944840	789624	4	1598,181,127,96,	0,3306,6063,11620,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	2939389	2944971	chr19:2939389-2944971	0	-	2939389	2939389	8553170	2	415,134,	0,5448,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	2949034	2950644	chr19:2949034-2950644	3	+	2949034	2949034	8553170	1	1610,	0,
#Partially deleted in new
chr19	2977445	2995184	chr19:2977445-2995184	1	+	2978233	2995004	789624	17	165,87,83,46,42,63,256,17,67,77,38,253,251,142,151,77,285,	0,752,2654,4092,4702,9383,9537,9910,10278,10452,10645,11615,12089,14397,15986,16573,17454,
#Partially deleted in new
chr19	2977537	2987161	chr19:2977537-2987161	0	+	2978233	2987161	789624	7	82,87,83,46,42,63,179,	0,660,2562,4000,4610,9291,9445,
#Partially deleted in new
chr19	2977549	2980407	chr19:2977549-2980407	1	+	2978233	2980186	789624	3	61,87,308,	0,648,2550,
#Partially deleted in new
chr19	2977563	2987974	chr19:2977563-2987974	0	+	2977563	2977563	8553170	10	47,87,83,46,42,63,256,17,67,77,	0,634,2536,3974,4584,9265,9419,9792,10160,10334,
#Partially deleted in new
chr19	2977579	2995179	chr19:2977579-2995179	3	+	2987066	2995004	789624	16	40,83,46,42,63,256,17,67,77,38,253,251,142,151,77,280,	0,2520,3958,4568,9249,9403,9776,10144,10318,10511,11481,11955,14263,15852,16439,17320,
#Partially deleted in new
chr19	2983905	2987187	chr19:2983905-2987187	0	+	2983905	2983905	8553170	3	314,63,205,	0,2923,3077,
#Partially deleted in new
chr19	2984147	2989760	chr19:2984147-2989760	0	+	2984147	2984147	8553170	9	273,63,256,17,67,77,38,253,226,	0,2681,2835,3208,3576,3750,3943,4913,5387,
#Partially deleted in new
chr19	2984176	2988064	chr19:2984176-2988064	0	+	2984176	2984176	8553170	3	43,63,1082,	0,2652,2806,
#Partially deleted in new
chr19	2987410	2995151	chr19:2987410-2995151	0	+	2987410	2987410	8553170	8	28,405,253,251,142,151,77,252,	0,313,1650,2124,4432,6021,6608,7489,
#Partially deleted in new
chr19	2988948	2991939	chr19:2988948-2991939	0	+	2988948	2988948	8553170	3	365,251,97,	0,586,2894,
#Partially deleted in new
chr19	2997637	3029167	chr19:2997637-3029167	3	-	2997847	3028904	789624	20	318,77,151,148,248,250,77,161,139,150,45,108,20,181,75,63,45,64,98,287,	0,3009,4715,7799,8083,8782,11231,11904,13384,16031,16932,18015,20202,21645,22061,27382,30191,30681,31068,31243,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr19	2997638	3045788	chr19:2997638-3045788	1	-	2997923	3045788	789624	19	317,151,148,248,250,77,161,139,150,45,108,20,184,75,63,45,64,98,63,	0,4714,7798,8082,8781,11230,11903,13383,16030,16931,18014,20201,21644,22060,27381,30190,30680,31067,48087,
#Partially deleted in new
chr19	2997638	3029131	chr19:2997638-3029131	1	-	2997847	3028339	789624	18	317,77,151,148,248,250,77,161,139,150,45,108,75,63,45,64,107,28,	0,3008,4714,7798,8082,8781,11230,11903,13383,16030,16931,18014,22060,27381,30190,30680,31067,31465,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr19	2997645	3047635	chr19:2997645-3047635	1	-	2997923	3045788	789624	20	310,151,148,248,250,77,161,139,150,45,108,20,184,75,63,45,64,98,74,73,	0,4707,7791,8075,8774,11223,11896,13376,16023,16924,18007,20194,21637,22053,27374,30183,30673,31060,48080,49917,
#Partially deleted in new
chr19	2997646	3028356	chr19:2997646-3028356	1	-	2997658	3028339	789624	6	116,52,75,63,45,38,	0,21765,22052,27373,30182,30672,
#Partially deleted in new
chr19	2997681	3029614	chr19:2997681-3029614	1	-	2997847	3028339	789624	18	274,77,151,148,248,250,77,161,139,150,45,108,75,63,45,64,98,65,	0,2965,4671,7755,8039,8738,11187,11860,13340,15987,16888,17971,22017,27338,30147,30637,31024,31868,
#Partially deleted in new
chr19	2997847	3029013	chr19:2997847-3029013	1	-	2997847	3028904	789624	20	108,77,151,148,248,250,77,161,139,150,45,108,20,184,75,63,45,64,98,133,	0,2799,4505,7589,7873,8572,11021,11694,13174,15821,16722,17805,19992,21435,21851,27172,29981,30471,30858,31033,
#Partially deleted in new
chr19	3005437	3025027	chr19:3005437-3025027	0	-	3005437	3025027	789624	7	147,248,250,77,36,75,8,	0,283,982,3431,4104,14261,19582,
#Partially deleted in new
chr19	3005838	3008876	chr19:3005838-3008876	0	-	3005838	3005838	8553170	3	130,193,8,	0,638,3030,
#Partially deleted in new
chr19	3009571	3019480	chr19:3009571-3019480	0	-	3009571	3009571	8553170	6	131,139,150,45,108,198,	0,1450,4097,4998,6081,9711,
#Partially deleted in new
chr19	3009660	3019372	chr19:3009660-3019372	0	-	3009660	3009660	8553170	6	42,139,150,45,108,90,	0,1361,4008,4909,5992,9622,
#Partially deleted in new
chr19	3013746	3020589	chr19:3013746-3020589	0	-	3013746	3013746	8553170	7	72,45,108,20,184,75,76,	0,823,1906,4093,5536,5952,6767,
#Partially deleted in new
chr19	3013790	3045730	chr19:3013790-3045730	0	-	3013790	3045730	789624	7	28,45,108,45,64,98,5,	0,779,1862,14038,14528,14915,31935,
#Partially deleted in new
chr19	3014570	3028919	chr19:3014570-3028919	0	-	3014570	3014570	8553170	9	44,108,20,491,63,45,64,98,39,	0,1082,3269,4712,10449,13258,13748,14135,14310,
#Partially deleted in new
chr19	3014596	3029043	chr19:3014596-3029043	0	-	3014596	3028904	789624	7	18,108,63,45,64,98,163,	0,1056,10423,13232,13722,14109,14284,
#Partially deleted in new
chr19	3014601	3025647	chr19:3014601-3025647	0	-	3014601	3014601	8553170	7	13,108,20,184,75,63,93,	0,1051,3238,4681,5097,10418,10953,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	3015714	3020227	chr19:3015714-3020227	0	-	3015714	3015714	8553170	5	46,20,181,75,256,	0,2125,3568,3984,4257,
#Partially deleted in new
chr19	3019300	3029613	chr19:3019300-3029613	0	-	3019300	3028904	789624	8	166,75,63,45,64,98,25,64,	0,398,5719,8528,9018,9405,9580,10249,
#Partially deleted in new
chr19	3019430	3025616	chr19:3019430-3025616	0	-	3019430	3019430	8553170	3	343,63,213,	0,5589,5973,
#Partially deleted in new
chr19	3019499	3029034	chr19:3019499-3029034	0	-	3019499	3019499	8553170	6	274,63,45,64,98,154,	0,5520,8329,8819,9206,9381,
#Partially deleted in new
chr19	3019552	3029622	chr19:3019552-3029622	0	-	3019552	3019552	8553170	7	221,63,45,64,98,25,73,	0,5467,8276,8766,9153,9328,9997,
#Partially deleted in new
chr19	3019701	3025375	chr19:3019701-3025375	0	-	3019701	3019701	8553170	2	72,356,	0,5318,
#Partially deleted in new
chr19	3052909	3063107	chr19:3052909-3063107	1	-	3053818	3062927	789624	7	1131,75,63,45,64,98,408,	0,1210,2754,3402,4769,8250,9790,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	3052909	3056768	chr19:3052909-3056768	0	-	3052909	3052909	8553170	2	2817,457,	0,3402,
#Partially deleted in new
chr19	3052909	3053724	chr19:3052909-3053724	3	+	3052909	3052909	8553170	2	426,138,	0,677,
#Partially deleted in new
chr19	3052982	3062883	chr19:3052982-3062883	0	-	3053855	3062883	789624	6	1212,63,45,64,98,184,	0,2681,3329,4696,8177,9717,
#Partially deleted in new
chr19	3053161	3062557	chr19:3053161-3062557	3	-	3053818	3062200	789624	7	879,75,63,45,64,98,384,	0,958,2502,3150,4517,7998,9012,
#Partially deleted in new
chr19	3053211	3057748	chr19:3053211-3057748	0	-	3053211	3053211	8553170	5	829,75,63,45,70,	0,908,2452,3100,4467,
#Partially deleted in new
chr19	3053407	3062190	chr19:3053407-3062190	0	-	3053407	3053407	8553170	5	51,45,64,98,17,	0,2904,4271,7752,8766,
#Partially deleted in new
chr19	3053548	3056196	chr19:3053548-3056196	0	-	3053548	3053548	8553170	3	492,75,533,	0,571,2115,
#Partially deleted in new
chr19	3053590	3061404	chr19:3053590-3061404	1	-	3053818	3057699	789624	6	450,75,63,45,64,245,	0,529,2073,2721,4088,7569,
#Partially deleted in new
chr19	3054022	3062410	chr19:3054022-3062410	0	-	3055704	3062200	789624	5	18,75,63,98,237,	0,97,1641,7137,8151,
#Partially deleted in new
chr19	3054167	3056679	chr19:3054167-3056679	0	-	3054167	3054167	8553170	3	27,63,368,	0,1496,2144,
#Partially deleted in new
chr19	3057439	3062277	chr19:3057439-3062277	0	-	3057439	3057439	8553170	3	303,98,104,	0,3720,4734,
#Partially deleted in new
chr19	3060951	3062234	chr19:3060951-3062234	0	-	3060951	3060951	8553170	2	306,61,	0,1222,
#Partially deleted in new
chr19	3094409	3124004	chr19:3094409-3124004	3	+	3094651	3121179	789624	7	378,185,155,129,130,154,3016,	0,15739,18920,20534,24514,24796,26579,
#Partially deleted in new
chr19	3094648	3115003	chr19:3094648-3115003	0	+	3094648	3094648	8553170	3	139,155,60,	0,18681,20295,
#Partially deleted in new
chr19	3113462	3121457	chr19:3113462-3121457	0	+	3113462	3121434	789624	6	22,129,130,154,185,113,	0,1481,5461,5743,7526,7882,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	3114946	3115428	chr19:3114946-3115428	0	+	3114946	3115350	789624	2	126,169,	0,313,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	3117149	3121454	chr19:3117149-3121454	0	+	3117149	3117149	8553170	2	2210,466,	0,3839,
#Deleted in new
chr19	3118664	3119304	chr19:3118664-3119304	3	-	3118664	3118664	8553170	2	401,51,	0,589,
#Deleted in new
chr19	3118695	3121319	chr19:3118695-3121319	0	+	3118695	3118695	8553170	4	124,130,154,331,	0,228,510,2293,
#Deleted in new
chr19	3118812	3119353	chr19:3118812-3119353	0	+	3118812	3118812	8553170	2	241,148,	0,393,
#Deleted in new
chr19	3121115	3122128	chr19:3121115-3122128	3	-	3121115	3121115	8553170	3	169,57,246,	0,280,767,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	3130716	3131398	chr19:3130716-3131398	7	+	3130716	3130716	16724991	2	139,223,	0,459,
#Partially deleted in new
chr19	3136192	3163769	chr19:3136192-3163769	3	+	3136450	3163019	789624	7	403,185,155,129,130,154,977,	0,12398,13938,15514,19630,21535,26600,
#Partially deleted in new
chr19	3136441	3151822	chr19:3136441-3151822	0	+	3136450	3146416	789624	5	154,189,185,155,116,	0,9961,12149,13689,15265,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	3141575	3155175	chr19:3141575-3155175	3	-	3141575	3141575	789624	4	855,131,1175,158,	0,1487,7040,13442,
#Partially deleted in new
chr19	3149839	3155826	chr19:3149839-3155826	0	+	3149839	3149839	8553170	3	446,129,4,	0,1867,5983,
#Partially deleted in new
chr19	3172345	3179527	chr19:3172345-3179527	0	+	3172345	3172345	8553170	2	99,314,	0,6868,
#Deleted in new
chr19	3178767	3180332	chr19:3178767-3180332	3	+	3178792	3179947	0	1	1565,	0,
#Partially deleted in new
chr19	3185562	3207856	chr19:3185562-3207856	1	+	3192507	3207688	789624	15	394,191,145,95,81,104,89,140,179,88,39,164,54,79,228,	0,6907,7721,10620,13254,15960,18193,18442,19010,20376,20589,20699,21635,21828,22066,
#Partially deleted in new
chr19	3185599	3209570	chr19:3185599-3209570	3	+	3186030	3207688	789624	15	615,191,145,95,81,104,89,140,179,88,39,164,54,79,1942,	0,6870,7684,10583,13217,15923,18156,18405,18973,20339,20552,20662,21598,21791,22029,
#Partially deleted in new
chr19	3185935	3206176	chr19:3185935-3206176	0	+	3186030	3206176	789624	9	279,95,81,104,89,140,179,88,25,	0,10247,12881,15587,17820,18069,18637,20003,20216,
#Partially deleted in new
chr19	3198840	3209575	chr19:3198840-3209575	0	+	3198840	3207688	789624	12	57,104,89,140,179,88,39,164,54,79,119,98,	0,2682,4915,5164,5732,7098,7311,7421,8357,8550,8788,10637,
#Partially deleted in new
chr19	3203796	3209575	chr19:3203796-3209575	0	+	3203796	3207688	789624	9	48,140,179,88,39,161,54,79,1947,	0,208,776,2142,2355,2468,3401,3594,3832,
#Partially deleted in new
chr19	3204014	3207468	chr19:3204014-3207468	0	+	3204014	3205853	789624	7	130,179,195,39,161,54,78,	0,558,1817,2137,2250,3183,3376,
#Partially deleted in new
chr19	3206421	3207850	chr19:3206421-3207850	0	+	3206421	3207688	789624	4	4,54,100,222,	0,776,969,1207,
#Deleted in new
chr19	3207465	3209571	chr19:3207465-3209571	0	+	3207465	3207465	8553170	3	4,119,337,	0,163,1769,
#Partially deleted in new
chr19	3224702	3297076	chr19:3224702-3297076	3	+	3224739	3293446	0	13	296,83,52,129,80,147,142,147,63,84,144,168,319,	0,26282,49169,51153,53328,56496,57423,57649,60199,61239,65528,68616,72055,
#Partially deleted in new
chr19	3224703	3296336	chr19:3224703-3296336	1	+	3224739	3293334	0	12	295,83,52,129,80,147,142,72,63,84,103,3018,	0,26281,49168,51152,53327,56495,57422,57723,60198,61238,65568,68615,
#Partially deleted in new
chr19	3225484	3297016	chr19:3225484-3297016	0	+	3273871	3293334	789624	13	134,83,52,129,80,147,142,147,63,84,103,168,259,	0,25500,48387,50371,52546,55714,56641,56867,59417,60457,64787,67834,71273,
#Partially deleted in new
chr19	3270613	3290347	chr19:3270613-3290347	0	+	3270613	3270613	8553170	8	57,34,16,142,72,63,84,117,	0,3258,10716,11512,11813,14288,15328,19617,
#Partially deleted in new
chr19	3270620	3282453	chr19:3270620-3282453	0	+	3270620	3270620	8553170	7	50,52,129,80,147,142,102,	0,3251,5235,7410,10578,11505,11731,
#Partially deleted in new
chr19	3273904	3297076	chr19:3273904-3297076	0	+	3275878	3293334	789624	11	19,129,80,147,142,147,63,84,103,168,2033,	0,1951,4126,7294,8221,8447,10997,12037,16367,19414,21139,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	3282256	3286791	chr19:3282256-3286791	0	+	3282256	3282256	8553170	5	11,147,63,84,568,	0,95,2645,3685,3967,
#Partially deleted in new
chr19	3284761	3293401	chr19:3284761-3293401	0	+	3284761	3284761	8553170	4	203,84,103,83,	0,1180,5510,8557,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	3296764	3302921	chr19:3296764-3302921	0	-	3296764	3296764	8553170	2	246,128,	0,6029,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	3296764	3302970	chr19:3296764-3302970	0	-	3296764	3296764	8553170	2	246,181,	0,6025,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	3296764	3303003	chr19:3296764-3303003	3	-	3296764	3296764	8553170	2	246,208,	0,6031,
#Partially deleted in new
chr19	3314402	3469217	chr19:3314402-3469217	1	+	3314760	3462769	789624	11	454,532,72,75,124,125,126,185,154,86,6466,	0,67309,110703,119115,119874,120680,134611,138079,139360,142147,148349,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	3355553	3355955	chr19:3355553-3355955	3	-	3355553	3355553	8553170	1	402,	0,
#Partially deleted in new
chr19	3359562	3469217	chr19:3359562-3469217	1	+	3359682	3462769	789624	11	123,532,72,75,124,125,126,185,154,86,6466,	0,22149,65543,73955,74714,75520,89451,92919,94200,96987,103189,
#Partially deleted in new
chr19	3359646	3463142	chr19:3359646-3463142	1	+	3359682	3456600	789624	10	39,532,72,75,124,125,126,185,86,391,	0,22065,65459,73871,74630,75436,89367,92835,96903,103105,
#Partially deleted in new
chr19	3359682	3456600	chr19:3359682-3456600	1	+	3359682	3456600	789624	8	3,532,75,124,125,126,185,51,	0,22029,73835,74594,75400,89331,92799,96867,
#Partially deleted in new
chr19	3366548	3462967	chr19:3366548-3462967	3	+	3366636	3462769	789624	9	118,532,72,75,124,125,126,185,216,	0,15163,58557,66969,67728,68534,82465,85933,96203,
#Partially deleted in new
chr19	3366582	3462900	chr19:3366582-3462900	1	+	3366636	3456600	789624	10	84,532,72,75,124,125,126,185,86,149,	0,15129,58523,66935,67694,68500,82431,85899,89967,96169,
#Partially deleted in new
chr19	3366585	3462907	chr19:3366585-3462907	1	+	3366636	3462769	789624	11	81,532,72,75,124,125,126,185,154,86,156,	0,15126,58520,66932,67691,68497,82428,85896,87177,89964,96166,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	3371394	3371602	chr19:3371394-3371602	3	+	3371394	3371394	8553170	1	208,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	3410595	3425147	chr19:3410595-3425147	0	+	3410595	3410595	8553170	2	583,42,	0,14510,
#Partially deleted in new
chr19	3435045	3463255	chr19:3435045-3463255	0	+	3435045	3435045	8553170	4	162,126,185,504,	0,13968,17436,27706,
#Partially deleted in new
chr19	3452578	3457989	chr19:3452578-3457989	0	+	3452578	3452578	8553170	4	88,154,86,107,	0,1184,3971,5304,
#Partially deleted in new
chr19	3452640	3454350	chr19:3452640-3454350	0	+	3452640	3452640	8553170	2	26,588,	0,1122,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	3473985	3480542	chr19:3473985-3480542	3	-	3474842	3480463	789624	4	1011,60,112,146,	0,4433,4832,6411,
#Deleted in new
chr19	3474406	3478488	chr19:3474406-3478488	1	-	3474842	3478447	789624	2	590,70,	0,4012,
#Deleted in new
chr19	3474507	3479088	chr19:3474507-3479088	1	-	3474842	3478447	789624	3	489,60,271,	0,3911,4310,
#Deleted in new
chr19	3478819	3480522	chr19:3478819-3480522	0	-	3478819	3478819	8553170	2	177,126,	0,1577,
#Deleted in new
chr19	3482803	3483446	chr19:3482803-3483446	3	-	3482803	3483403	789624	2	248,245,	0,398,
#Partially deleted in new
chr19	3490821	3500940	chr19:3490821-3500940	3	-	3491491	3496814	0	5	990,238,77,346,380,	0,1440,3206,5719,9739,
#Partially deleted in new
chr19	3506272	3538330	chr19:3506272-3538330	3	+	3522989	3534836	0	14	202,103,126,64,128,83,184,66,103,185,234,105,93,3536,	0,16683,19595,19847,19986,20707,21358,24519,25441,25638,26144,27021,28148,28522,
#Partially deleted in new
chr19	3506376	3527060	chr19:3506376-3527060	0	+	3506376	3506376	8553170	5	98,103,126,267,81,	0,16579,19491,19743,20603,
#Deleted in new
chr19	3521247	3521320	chr19:3521247-3521320	3	-	3521247	3521247	8553170	1	73,	0,
#Partially deleted in new
chr19	3522983	3534839	chr19:3522983-3534839	0	+	3522989	3533297	789624	13	75,126,64,128,83,184,66,103,185,74,105,93,45,	0,2884,3136,3275,3996,4647,7808,8730,8927,9593,10310,11437,11811,
#Partially deleted in new
chr19	3522989	3534836	chr19:3522989-3534836	1	+	3522989	3534836	0	11	69,126,64,128,66,103,185,234,105,93,42,	0,2878,3130,3269,7802,8724,8921,9427,10304,11431,11805,
#Partially deleted in new
chr19	3522989	3534836	chr19:3522989-3534836	1	+	3522989	3534836	0	13	69,126,64,128,83,184,66,103,185,234,105,102,42,	0,2878,3130,3269,3990,4641,7802,8724,8921,9427,10304,11431,11805,
#Deleted in new
chr19	3526099	3531766	chr19:3526099-3531766	0	+	3526099	3526099	8553170	6	84,128,83,184,66,53,	0,159,880,1531,4692,5614,
#Deleted in new
chr19	3532482	3533748	chr19:3532482-3533748	0	+	3532482	3532482	8553170	2	168,455,	0,811,
#Deleted in new
chr19	3534284	3535236	chr19:3534284-3535236	0	+	3534284	3534284	8553170	2	229,442,	0,510,
#Partially deleted in new
chr19	3538260	3547364	chr19:3538260-3547364	0	-	3538754	3547364	789624	5	496,131,95,171,93,	0,6548,7813,7994,9011,
#Partially deleted in new
chr19	3538274	3546358	chr19:3538274-3546358	0	-	3542780	3546358	789624	5	482,202,131,95,104,	0,4501,6534,7799,7980,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	3538274	3540043	chr19:3538274-3540043	0	-	3538274	3538274	8553170	1	1769,	0,
#Partially deleted in new
chr19	3538649	3543382	chr19:3538649-3543382	0	-	3538649	3538649	8553170	2	107,607,	0,4126,
#Partially deleted in new
chr19	3539153	3544030	chr19:3539153-3544030	3	+	3539177	3544010	789624	4	107,239,126,202,	0,4081,4401,4675,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	3539353	3540041	chr19:3539353-3540041	1	-	3539357	3539789	789624	1	688,	0,
#Partially deleted in new
chr19	3544198	3557573	chr19:3544198-3557573	3	-	3544709	3557403	789624	10	534,131,95,171,93,93,183,145,211,468,	0,610,1875,2056,3073,3256,3649,3924,6785,12907,
#Partially deleted in new
chr19	3544198	3557563	chr19:3544198-3557563	0	-	3544709	3557403	789624	11	109,378,131,95,171,93,93,183,145,211,431,	0,156,610,1875,2056,3073,3256,3649,3924,6785,12934,
#Partially deleted in new
chr19	3544198	3557569	chr19:3544198-3557569	3	+	3544198	3544198	8553170	2	456,109,	0,13262,
#Partially deleted in new
chr19	3544199	3557563	chr19:3544199-3557563	1	-	3544709	3557403	789624	11	110,376,131,95,171,93,93,183,145,211,431,	0,157,609,1874,2055,3072,3255,3648,3923,6784,12933,
#Partially deleted in new
chr19	3544675	3547331	chr19:3544675-3547331	0	-	3544722	3547331	789624	4	264,95,171,60,	0,1398,1579,2596,
#Partially deleted in new
chr19	3544833	3551045	chr19:3544833-3551045	0	-	3544833	3551045	789624	7	106,95,93,93,183,145,62,	0,1240,2438,2621,3014,3289,6150,
#Partially deleted in new
chr19	3547290	3573851	chr19:3547290-3573851	0	-	3551007	3573584	789624	6	74,93,183,145,211,296,	0,164,557,832,3693,26265,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	3547326	3573629	chr19:3547326-3573629	0	-	3547326	3573584	789624	5	38,93,183,98,74,	0,128,521,19818,26229,
#Partially deleted in new
chr19	3547918	3573789	chr19:3547918-3573789	0	-	3547918	3547918	8553170	3	112,211,234,	0,3065,25637,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	3550987	3573614	chr19:3550987-3573614	0	-	3572888	3573584	789624	4	207,98,161,59,	0,16157,21873,22568,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	3558014	3558486	chr19:3558014-3558486	3	+	3558014	3558014	8553170	2	67,302,	0,170,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	3567277	3567959	chr19:3567277-3567959	3	-	3567277	3567277	8553170	1	682,	0,
#Partially deleted in new
chr19	3568119	3568273	chr19:3568119-3568273	7	-	3568119	3568119	16724991	1	154,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	3571571	3574290	chr19:3571571-3574290	0	-	3571571	3571571	8553170	4	84,161,183,48,	0,1289,1984,2671,
#Partially deleted in new
chr19	3572776	3576944	chr19:3572776-3576944	0	+	3573309	3576944	789624	8	48,56,109,204,121,47,73,53,	0,515,915,1606,2763,3484,3776,4115,
#Deleted in new
chr19	3572822	3574269	chr19:3572822-3574269	0	+	3572822	3572822	8553170	3	172,56,578,	0,469,869,
#Partially deleted in new
chr19	3572937	3579088	chr19:3572937-3579088	3	+	3573309	3578521	789624	10	57,56,109,204,121,47,73,216,133,580,	0,354,754,1445,2602,3323,3615,3954,5043,5571,
#Partially deleted in new
chr19	3572947	3575642	chr19:3572947-3575642	0	+	3573309	3575642	789624	5	47,56,109,246,103,	0,344,744,1393,2592,
#Partially deleted in new
chr19	3572976	3575614	chr19:3572976-3575614	0	+	3573309	3575614	789624	4	371,109,204,75,	0,715,1406,2563,
#Partially deleted in new
chr19	3572978	3576602	chr19:3572978-3576602	0	+	3573309	3575553	789624	7	16,56,109,217,121,47,50,	0,313,713,1391,2561,3282,3574,
#Partially deleted in new
chr19	3572978	3579088	chr19:3572978-3579088	0	+	3572978	3572978	8553170	8	369,895,121,47,73,216,133,580,	0,713,2561,3282,3574,3913,5002,5530,
#Partially deleted in new
chr19	3572985	3577107	chr19:3572985-3577107	0	+	3573309	3577107	789624	8	9,56,109,217,159,47,73,216,	0,306,706,1384,2516,3275,3567,3906,
#Deleted in new
chr19	3573696	3574161	chr19:3573696-3574161	0	+	3573696	3573696	8553170	2	104,259,	0,206,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	3574292	3575964	chr19:3574292-3575964	0	+	3574292	3574292	8553170	2	294,425,	0,1247,
#Partially deleted in new
chr19	3575541	3576987	chr19:3575541-3576987	0	+	3575541	3575541	8553170	3	119,365,96,	0,719,1350,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	3575650	3578671	chr19:3575650-3578671	0	+	3575650	3575650	8553170	5	657,73,216,133,163,	0,902,1241,2330,2858,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	3575875	3577022	chr19:3575875-3577022	0	+	3575875	3575875	8553170	2	750,131,	0,1016,
#Deleted in new
chr19	3576351	3578342	chr19:3576351-3578342	0	+	3576351	3576351	8553170	3	274,216,362,	0,540,1629,
#Deleted in new
chr19	3576615	3579083	chr19:3576615-3579083	0	+	3576615	3578897	789624	4	10,216,133,382,	0,276,1365,2086,
#Deleted in new
chr19	3576884	3578444	chr19:3576884-3578444	0	+	3576884	3576884	8553170	2	223,464,	0,1096,
#Partially deleted in new
chr19	3585552	3593541	chr19:3585552-3593541	3	+	3585597	3590190	789624	6	270,186,181,113,82,3503,	0,942,1261,3890,4278,4486,
#Partially deleted in new
chr19	3585575	3593541	chr19:3585575-3593541	1	+	3585597	3590190	789624	6	247,186,181,113,82,3503,	0,919,1238,3867,4255,4463,
#Partially deleted in new
chr19	3585597	3593288	chr19:3585597-3593288	1	+	3585597	3593288	789624	6	225,186,181,113,95,3250,	0,897,1216,3845,4233,4441,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	3594505	3606840	chr19:3594505-3606840	3	-	3595687	3600634	0	3	1428,869,311,	0,5343,12024,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	3594551	3600669	chr19:3594551-3600669	1	-	3595550	3600634	789624	2	1382,432,	0,5686,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	3594779	3606660	chr19:3594779-3606660	1	-	3594835	3600634	0	4	297,197,869,131,	0,957,5069,11750,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	3597921	3600133	chr19:3597921-3600133	0	-	3597921	3597921	8553170	2	185,285,	0,1927,
#Deleted in new
chr19	3607246	3613930	chr19:3607246-3613930	3	+	3607246	3607246	789624	4	163,66,538,1146,	0,3953,4519,5538,
#Partially deleted in new
chr19	3610640	3626815	chr19:3610640-3626815	3	-	3611922	3626762	789624	10	1773,308,123,193,115,163,146,96,475,220,	0,2417,2823,3756,8234,8439,9486,10066,13047,15955,
#Deleted in new
chr19	3610644	3612276	chr19:3610644-3612276	0	-	3611922	3612276	789624	2	322,377,	0,1255,
#Deleted in new
chr19	3610644	3613538	chr19:3610644-3613538	0	-	3611922	3613538	789624	4	327,510,308,75,	0,1259,2413,2819,
#Partially deleted in new
chr19	3610646	3626815	chr19:3610646-3626815	0	-	3611922	3626762	789624	12	325,132,514,308,123,193,115,163,146,96,475,220,	0,582,1253,2411,2817,3750,8228,8433,9480,10060,13041,15949,
#Partially deleted in new
chr19	3610649	3626815	chr19:3610649-3626815	1	-	3611922	3626762	789624	11	322,510,308,123,193,115,163,146,96,475,220,	0,1254,2408,2814,3747,8225,8430,9477,10057,13038,15946,
#Partially deleted in new
chr19	3610659	3626815	chr19:3610659-3626815	1	-	3611922	3626762	789624	12	312,136,510,308,123,193,115,163,146,96,475,220,	0,569,1244,2398,2804,3737,8215,8420,9467,10047,13028,15936,
#Partially deleted in new
chr19	3611567	3621028	chr19:3611567-3621028	0	-	3611567	3611567	8553170	8	846,308,123,193,115,163,146,322,	0,1490,1896,2829,7307,7512,8559,9139,
#Partially deleted in new
chr19	3611567	3619191	chr19:3611567-3619191	0	-	3614392	3619191	789624	6	846,308,123,204,115,112,	0,1490,1896,2818,7307,7512,
#Partially deleted in new
chr19	3613506	3619166	chr19:3613506-3619166	0	-	3613506	3619166	789624	4	80,109,115,87,	0,879,5368,5573,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	3614409	3616692	chr19:3614409-3616692	0	-	3614409	3614409	8553170	1	2283,	0,
#Partially deleted in new
chr19	3630182	3700479	chr19:3630182-3700479	3	-	3633166	3700390	0	18	2987,84,133,105,33,139,165,85,49,84,206,300,153,118,131,93,32,183,	0,3254,8701,11522,12724,13060,13904,15791,17155,18442,21643,23107,26222,30783,31688,34639,37139,70114,
#Partially deleted in new
chr19	3632875	3700465	chr19:3632875-3700465	1	-	3633166	3700390	0	17	294,133,105,33,139,165,85,49,84,206,300,153,118,131,93,32,169,	0,6008,8829,10031,10367,11211,13098,14462,15749,18950,20414,23529,28090,28995,31946,34446,67421,
#Partially deleted in new
chr19	3636600	3700390	chr19:3636600-3700390	1	-	3637823	3700390	0	17	1406,133,105,33,139,165,85,49,84,206,300,153,118,131,93,32,94,	0,2283,5104,6306,6642,7486,9373,10737,12024,15225,16689,19804,24365,25270,28221,30721,63696,
#Partially deleted in new
chr19	3636600	3700390	chr19:3636600-3700390	1	-	3637409	3700390	0	17	1013,133,105,33,139,165,85,49,84,206,300,153,118,131,93,32,94,	0,2283,5104,6306,6642,7486,9373,10737,12024,15225,16689,19804,24365,25270,28221,30721,63696,
#Partially deleted in new
chr19	3644088	3649429	chr19:3644088-3649429	0	-	3644088	3644088	8553170	5	163,85,49,84,75,	0,1885,3249,4536,5266,
#Partially deleted in new
chr19	3649890	3700441	chr19:3649890-3700441	0	-	3649890	3649890	8553170	9	133,206,300,153,118,131,93,32,145,	0,1935,3399,6514,11075,11980,14931,17431,50406,
#Partially deleted in new
chr19	3661929	3667344	chr19:3661929-3667344	0	-	3661929	3661929	8553170	3	72,58,23,	0,2927,5392,
#Partially deleted in new
chr19	3668403	3700462	chr19:3668403-3700462	0	-	3668403	3668403	8553170	3	37,232,166,	0,1269,31893,
#Partially deleted in new
chr19	3672581	3674295	chr19:3672581-3674295	3	+	3672581	3672581	8553170	3	33,157,292,	0,1158,1422,
#Partially deleted in new
chr19	3708108	3750812	chr19:3708108-3750812	3	+	3728432	3750684	0	21	453,57,110,103,352,104,160,109,74,67,157,109,238,212,96,71,211,101,288,47,231,	0,20315,20495,21919,22246,23826,25644,26218,27457,27760,28056,30446,30788,32443,35830,37902,38376,38667,39685,42029,42473,
#Partially deleted in new
chr19	3708361	3730434	chr19:3708361-3730434	0	+	3728432	3730434	789624	5	200,57,140,103,80,	0,20062,20212,21666,21993,
#Partially deleted in new
chr19	3708502	3750810	chr19:3708502-3750810	1	+	3728663	3750684	0	20	59,110,103,352,104,160,109,74,67,157,109,238,212,96,71,211,101,288,47,229,	0,20101,21525,21852,23432,25250,25824,27063,27366,27662,30052,30394,32049,35436,37508,37982,38273,39291,41635,42079,
#Partially deleted in new
chr19	3721616	3730287	chr19:3721616-3730287	0	+	3721616	3721616	8553170	4	294,57,110,260,	0,6807,6987,8411,
#Partially deleted in new
chr19	3721736	3750809	chr19:3721736-3750809	1	+	3721892	3750684	0	21	174,57,110,103,352,104,160,109,74,67,157,109,238,212,96,71,211,101,288,47,228,	0,6687,6867,8291,8618,10198,12016,12590,13829,14132,14428,16818,17160,18815,22202,24274,24748,25039,26057,28401,28845,
#Partially deleted in new
chr19	3728375	3750813	chr19:3728375-3750813	1	+	3728375	3750684	0	20	105,110,103,352,104,160,109,74,67,157,109,238,212,96,71,211,101,288,47,232,	0,228,1652,1979,3559,5377,5951,7190,7493,7789,10179,10521,12176,15563,17635,18109,18400,19418,21762,22206,
#Partially deleted in new
chr19	3743662	3747894	chr19:3743662-3747894	0	+	3743662	3743662	8553170	5	372,71,211,101,101,	0,2348,2822,3113,4131,
#Partially deleted in new
chr19	3746642	3750813	chr19:3746642-3750813	0	+	3746642	3747858	789624	5	53,60,288,47,232,	0,174,1151,3495,3939,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	3749613	3750810	chr19:3749613-3750810	0	+	3749613	3749613	8553170	3	61,47,229,	0,524,968,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	3750818	3754800	chr19:3750818-3754800	0	-	3750818	3750818	8553170	8	279,141,120,213,171,162,87,606,	0,370,615,1689,2001,2946,3200,3376,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	3750878	3756272	chr19:3750878-3756272	0	-	3750878	3750878	8553170	4	219,365,213,3453,	0,310,1629,1941,
#Partially deleted in new
chr19	3750879	3761699	chr19:3750879-3761699	3	-	3751025	3760264	0	11	218,141,120,213,171,162,87,146,40,613,164,	0,309,554,1628,1940,2885,3139,3315,8681,8809,10656,
#Deleted in new
chr19	3751065	3751731	chr19:3751065-3751731	0	-	3751065	3751065	8553170	2	32,543,	0,123,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	3751249	3751894	chr19:3751249-3751894	0	-	3751249	3751249	8553170	2	80,461,	0,184,
#Partially deleted in new
chr19	3752599	3754141	chr19:3752599-3754141	0	-	3752599	3752599	8553170	4	121,171,162,123,	0,220,1165,1419,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	3753839	3756517	chr19:3753839-3756517	3	+	3753839	3753839	8553170	3	62,218,276,	0,1499,2402,
#Partially deleted in new
chr19	3753896	3760127	chr19:3753896-3760127	0	-	3753896	3753896	8553170	4	30,87,146,567,	0,122,298,5664,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	3754619	3756659	chr19:3754619-3756659	3	-	3754619	3754619	8553170	2	129,208,	0,1832,
#Partially deleted in new
chr19	3759611	3761570	chr19:3759611-3761570	0	-	3759611	3759611	8553170	2	690,35,	0,1924,
#Partially deleted in new
chr19	3762663	3767565	chr19:3762663-3767565	3	+	3762700	3767393	0	3	155,166,305,	0,2502,4597,
#Partially deleted in new
chr19	3762704	3768575	chr19:3762704-3768575	0	+	3762704	3768314	789624	2	114,377,	0,5494,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	3769088	3772221	chr19:3769088-3772221	3	-	3770620	3771742	789624	3	1871,484,59,	0,2438,3074,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	3769088	3772211	chr19:3769088-3772211	1	-	3770620	3771742	789624	3	1871,225,49,	0,2438,3074,
#Deleted in new
chr19	3775995	3776182	chr19:3775995-3776182	7	-	3775995	3775995	16724991	1	187,	0,
#Partially deleted in new
chr19	3777969	3789347	chr19:3777969-3789347	1	-	3778182	3789347	0	13	453,87,196,74,85,100,66,94,220,116,114,60,75,	0,539,1022,1408,1563,1728,3637,5156,5844,6154,6368,6855,11303,
#Partially deleted in new
chr19	3777972	3786416	chr19:3777972-3786416	1	-	3778182	3785135	0	14	450,87,196,74,85,100,66,94,220,116,114,60,223,248,	0,536,1019,1405,1560,1725,3634,5153,5841,6151,6365,6852,7091,8196,
#Partially deleted in new
chr19	3777972	3786413	chr19:3777972-3786413	3	-	3778182	3784833	0	13	450,87,196,74,85,100,66,94,220,116,114,60,245,	0,536,1019,1405,1560,1725,3634,5153,5841,6151,6365,6852,8196,
#Partially deleted in new
chr19	3777974	3801812	chr19:3777974-3801812	1	-	3778182	3789347	0	14	448,87,196,74,85,100,66,94,220,116,114,60,132,281,	0,534,1017,1403,1558,1723,3632,5151,5839,6149,6363,6850,11298,23557,
#Partially deleted in new
chr19	3777974	3786282	chr19:3777974-3786282	1	-	3778182	3785135	789624	14	448,84,196,74,85,100,66,94,220,116,114,60,223,114,	0,534,1017,1403,1558,1723,3632,5151,5839,6149,6363,6850,7089,8194,
#Partially deleted in new
chr19	3779132	3784152	chr19:3779132-3784152	0	-	3779132	3784152	789624	8	55,74,85,100,66,172,220,29,	0,245,400,565,2474,3993,4681,4991,
#Partially deleted in new
chr19	3779388	3783918	chr19:3779388-3783918	0	-	3779388	3783918	789624	7	63,85,100,66,120,172,105,	0,144,309,2218,3429,3737,4425,
#Partially deleted in new
chr19	3779788	3784573	chr19:3779788-3784573	0	-	3779788	3784128	789624	6	9,66,94,220,116,236,	0,1818,3337,4025,4335,4549,
#Deleted in new
chr19	3783871	3786073	chr19:3783871-3786073	0	-	3783871	3785135	789624	6	162,116,114,60,223,49,	0,252,466,953,1192,2153,
#Partially deleted in new
chr19	3784020	3801799	chr19:3784020-3801799	0	-	3784020	3784833	789624	5	13,116,114,60,268,	0,103,317,804,17511,
#Deleted in new
chr19	3785096	3786016	chr19:3785096-3786016	0	-	3785096	3785135	789624	2	190,404,	0,516,
#Partially deleted in new
chr19	3785246	3802129	chr19:3785246-3802129	0	-	3785246	3789347	789624	4	40,132,155,235,	0,4026,16285,16648,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	3787459	3801802	chr19:3787459-3801802	0	-	3787459	3787459	8553170	3	256,132,271,	0,1813,14072,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	3793073	3801781	chr19:3793073-3801781	0	-	3793073	3793073	8553170	2	325,250,	0,8458,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	3793129	3801803	chr19:3793129-3801803	0	-	3793129	3793129	8553170	2	272,272,	0,8402,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr19	3804023	3869028	chr19:3804023-3869028	3	-	3805948	3869017	789624	19	2102,98,112,96,95,139,172,191,109,140,120,158,178,183,254,219,115,211,64,	0,3148,4848,6726,7248,9796,12650,15021,16158,17316,18057,19222,21206,23447,27279,27636,29640,30749,64941,
#Partially deleted in new
chr19	3821426	3869028	chr19:3821426-3869028	0	-	3823337	3869017	789624	9	53,120,158,183,254,219,115,211,64,	0,654,1819,6044,9876,10233,12237,13346,47538,
#Partially deleted in new
chr19	3831500	3869029	chr19:3831500-3869029	0	-	3831500	3831500	8553170	5	56,151,115,211,65,	0,159,2163,3272,37464,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	3833540	3869029	chr19:3833540-3869029	0	-	3833540	3833540	8553170	3	238,211,65,	0,1232,35424,
#Partially deleted in new
chr19	3833719	3869029	chr19:3833719-3869029	0	-	3855477	3869017	789624	4	59,211,158,65,	0,1053,21682,35245,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	3851804	3869015	chr19:3851804-3869015	0	-	3855477	3869015	789624	3	810,158,51,	0,3597,17160,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	3851812	3869032	chr19:3851812-3869032	1	-	3852454	3869017	789624	2	802,68,	0,17152,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	3852361	3869023	chr19:3852361-3869023	1	-	3852454	3855448	789624	4	253,158,62,59,	0,3040,4598,16603,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	3852439	3855590	chr19:3852439-3855590	1	-	3852454	3855448	789624	2	175,189,	0,2962,
#Partially deleted in new
chr19	3870990	3872107	chr19:3870990-3872107	7	+	3870990	3870990	16724991	3	106,307,121,	0,423,996,
#Partially deleted in new
chr19	3879863	3905595	chr19:3879863-3905595	0	+	3885767	3905595	789624	5	92,99,118,59,162,	0,1046,5863,22623,25570,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	3880582	3928079	chr19:3880582-3928079	3	+	3885767	3924592	789624	13	426,118,59,222,186,103,132,87,99,36,72,33,3497,	0,5144,21904,24851,27151,27685,28903,30220,33175,37159,38223,40183,44000,
#Partially deleted in new
chr19	3880684	3893669	chr19:3880684-3893669	0	+	3880684	3880684	8553170	3	324,118,106,	0,5042,12879,
#Partially deleted in new
chr19	3880684	3924997	chr19:3880684-3924997	0	+	3885767	3905451	789624	14	324,118,71,59,222,186,103,132,87,99,36,72,33,415,	0,5042,14442,21802,24749,27049,27583,28801,30118,33073,37057,38121,40081,43898,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	3885767	3926316	chr19:3885767-3926316	1	+	3885767	3922186	789624	13	77,59,222,186,103,132,87,99,36,72,33,64,1734,	0,16719,19666,21966,22500,23718,25035,27990,31974,33038,34998,36391,38815,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	3920244	3920506	chr19:3920244-3920506	3	-	3920244	3920244	8553170	1	262,	0,
#Partially deleted in new
chr19	3933102	3942416	chr19:3933102-3942416	3	+	3933671	3942273	789624	8	76,240,91,49,157,72,107,334,	0,355,3472,4137,5500,6797,7968,8980,
#Partially deleted in new
chr19	3933102	3942414	chr19:3933102-3942414	1	+	3933671	3942273	789624	8	76,240,91,64,157,72,107,332,	0,355,3472,4122,5500,6797,7968,8980,
#Partially deleted in new
chr19	3933115	3942413	chr19:3933115-3942413	1	+	3936575	3942125	789624	5	63,91,49,157,331,	0,3459,4124,5487,8967,
#Partially deleted in new
chr19	3933606	3942369	chr19:3933606-3942369	1	+	3933671	3942273	789624	7	91,91,64,157,72,107,287,	0,2968,3618,4996,6293,7464,8476,
#Partially deleted in new
chr19	3936621	3942174	chr19:3936621-3942174	0	+	3936621	3939937	789624	7	44,49,67,53,72,107,92,	0,618,1981,2085,3278,4449,5461,
#Partially deleted in new
chr19	3958452	3971070	chr19:3958452-3971070	3	-	3959100	3969735	0	9	1185,46,153,27,49,130,361,156,150,	0,1606,2556,5190,5418,5791,6178,11221,12468,
#Partially deleted in new
chr19	3958453	3969828	chr19:3958453-3969828	1	-	3959100	3969735	0	8	1184,46,153,27,49,130,361,155,	0,1605,2555,5189,5417,5790,6177,11220,
#Partially deleted in new
chr19	3958457	3961840	chr19:3958457-3961840	0	-	3958457	3958457	8553170	3	1180,46,832,	0,1601,2551,
#Partially deleted in new
chr19	3959638	3961159	chr19:3959638-3961159	0	-	3959977	3961159	789624	2	466,151,	0,1370,
#Deleted in new
chr19	3961413	3961512	chr19:3961413-3961512	3	-	3961413	3961413	5263520	1	99,	0,
#Partially deleted in new
chr19	3964321	3971123	chr19:3964321-3971123	0	-	3964321	3969735	789624	4	52,361,156,102,	0,309,5352,6700,
#Partially deleted in new
chr19	3964322	3970624	chr19:3964322-3970624	0	-	3964322	3969735	789624	4	51,361,156,31,	0,308,5351,6271,
#Partially deleted in new
chr19	3964630	3969938	chr19:3964630-3969938	0	-	3964630	3969735	789624	2	361,265,	0,5043,
#Partially deleted in new
chr19	3976055	3985469	chr19:3976055-3985469	3	-	3976553	3985380	0	15	692,133,183,354,108,259,196,139,114,106,179,212,182,215,92,	0,1159,1372,1763,3273,3752,4458,4785,5283,5891,6190,6751,7054,8080,9322,
#Deleted in new
chr19	3976055	3978134	chr19:3976055-3978134	0	-	3976151	3978134	789624	2	245,107,	0,1972,
#Partially deleted in new
chr19	3978085	3979459	chr19:3978085-3979459	0	-	3978085	3978085	8553170	2	87,131,	0,1243,
#Deleted in new
chr19	3980686	3982313	chr19:3980686-3982313	0	-	3980686	3980686	8553170	4	293,114,106,68,	0,652,1260,1559,
#Deleted in new
chr19	3980939	3982534	chr19:3980939-3982534	0	-	3980939	3980939	8553170	4	40,114,106,289,	0,399,1007,1306,
#Deleted in new
chr19	3982506	3982572	chr19:3982506-3982572	3	-	3982506	3982506	789624	1	66,	0,
#Deleted in new
chr19	3983253	3985112	chr19:3983253-3985112	0	-	3983253	3983253	8553170	3	38,215,320,	0,882,1539,
#Deleted in new
chr19	3983856	3985463	chr19:3983856-3985463	0	-	3983856	3983856	8553170	2	494,86,	0,1521,
#Partially deleted in new
chr19	4007645	4039386	chr19:4007645-4039386	3	+	4007760	4037875	789624	11	142,427,85,42,91,129,106,74,161,131,1771,	0,5277,16390,20500,20864,21074,21285,25454,25774,29728,29970,
#Partially deleted in new
chr19	4007753	4028587	chr19:4007753-4028587	0	+	4007753	4007753	8553170	4	34,427,42,78,	0,5169,20392,20756,
#Partially deleted in new
chr19	4007755	4028225	chr19:4007755-4028225	0	+	4007755	4007755	8553170	4	32,427,85,80,	0,5167,16280,20390,
#Partially deleted in new
chr19	4018434	4028786	chr19:4018434-4028786	0	+	4018434	4018434	8553170	5	302,85,42,91,67,	0,5601,9711,10075,10285,
#Deleted in new
chr19	4028460	4028814	chr19:4028460-4028814	0	+	4028460	4028460	8553170	2	140,95,	0,259,
#Partially deleted in new
chr19	4044363	4066945	chr19:4044363-4066945	3	-	4047751	4055232	0	3	3881,1277,264,	0,9607,22318,
#Partially deleted in new
chr19	4047741	4065732	chr19:4047741-4065732	1	-	4047751	4055232	0	3	503,1277,303,	0,6229,17688,
#Deleted in new
chr19	4061614	4062749	chr19:4061614-4062749	3	-	4061614	4061614	8553170	2	625,59,	0,1076,
#Partially deleted in new
chr19	4090320	4124129	chr19:4090320-4124129	3	-	4090597	4123875	0	11	388,46,62,65,214,125,52,78,147,211,346,	0,4132,5067,6958,8880,10698,10908,12055,20188,27098,33463,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	4090323	4100679	chr19:4090323-4100679	0	-	4090323	4090323	8553170	4	385,997,65,1479,	0,4129,6955,8877,
#Partially deleted in new
chr19	4090323	4103204	chr19:4090323-4103204	0	-	4090323	4090323	8553170	8	385,46,62,65,214,125,52,829,	0,4129,5064,6955,8877,10695,10905,12052,
#Partially deleted in new
chr19	4090332	4124117	chr19:4090332-4124117	1	-	4090597	4117430	789624	12	376,46,62,65,214,125,52,78,147,211,32,63,	0,4120,5055,6946,8868,10686,10896,12043,20176,27086,33451,33722,
#Partially deleted in new
chr19	4090433	4101272	chr19:4090433-4101272	0	-	4090433	4090433	8553170	5	275,46,62,125,44,	0,4019,4954,10585,10795,
#Partially deleted in new
chr19	4090596	4101047	chr19:4090596-4101047	0	-	4090597	4101047	789624	5	112,46,62,65,29,	0,3856,4791,6682,10422,
#Partially deleted in new
chr19	4099194	4103213	chr19:4099194-4103213	0	-	4099194	4099194	8553170	5	220,125,52,78,397,	0,1824,2034,3181,3622,
#Partially deleted in new
chr19	4099408	4104792	chr19:4099408-4104792	0	-	4099408	4099408	8553170	5	6,125,52,78,170,	0,1610,1820,2967,5214,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	4100458	4102504	chr19:4100458-4102504	0	-	4100458	4100458	8553170	3	685,52,129,	0,770,1917,
#Partially deleted in new
chr19	4101070	4124072	chr19:4101070-4124072	0	-	4101070	4101070	8553170	7	73,52,78,73,147,211,289,	0,158,1305,2341,9438,16348,22713,
#Partially deleted in new
chr19	4153600	4173054	chr19:4153600-4173054	3	+	4153747	4171969	789624	10	174,129,301,119,138,107,69,85,97,1399,	0,1298,3394,6063,10902,14750,16539,17490,17782,18055,
#Partially deleted in new
chr19	4153639	4171969	chr19:4153639-4171969	1	+	4153747	4171969	789624	10	135,129,298,119,138,107,69,85,97,314,	0,1259,3358,6024,10863,14711,16500,17451,17743,18016,
#Partially deleted in new
chr19	4153667	4171992	chr19:4153667-4171992	1	+	4153747	4171704	789624	9	107,129,301,119,138,69,85,97,337,	0,1231,3327,5996,10835,16472,17423,17715,17988,
#Partially deleted in new
chr19	4153667	4171984	chr19:4153667-4171984	1	+	4153747	4171969	789624	10	107,129,301,119,132,107,69,85,97,329,	0,1231,3327,5996,10841,14683,16472,17423,17715,17988,
#Partially deleted in new
chr19	4164442	4171663	chr19:4164442-4171663	0	+	4164442	4164442	8553170	6	198,107,69,85,97,8,	0,3908,5697,6648,6940,7213,
#Partially deleted in new
chr19	4174108	4182550	chr19:4174108-4182550	1	-	4174616	4182539	0	7	838,124,96,60,183,128,77,	0,919,1733,2970,4995,6673,8365,
#Partially deleted in new
chr19	4174108	4182604	chr19:4174108-4182604	3	-	4174616	4182539	0	8	838,124,81,96,60,183,128,131,	0,919,1571,1733,2970,4995,6673,8365,
#Partially deleted in new
chr19	4174108	4182544	chr19:4174108-4182544	0	-	4179220	4182539	789624	6	838,124,96,60,183,71,	0,919,1733,2970,4995,8365,
#Partially deleted in new
chr19	4174108	4182547	chr19:4174108-4182547	1	-	4174897	4182539	789624	7	838,84,81,96,60,128,74,	0,919,1571,1733,2970,6673,8365,
#Partially deleted in new
chr19	4174109	4182565	chr19:4174109-4182565	0	-	4179220	4182539	789624	7	837,124,81,96,60,183,92,	0,918,1570,1732,2969,4994,8364,
#Partially deleted in new
chr19	4174140	4182279	chr19:4174140-4182279	1	-	4174897	4179264	789624	8	806,84,81,96,60,183,128,69,	0,887,1539,1701,2938,4963,6641,8070,
#Partially deleted in new
chr19	4174619	4182530	chr19:4174619-4182530	0	-	4174619	4174619	8553170	5	327,910,60,183,57,	0,408,2459,4484,7854,
#Partially deleted in new
chr19	4174635	4182500	chr19:4174635-4182500	0	-	4174635	4182500	789624	7	311,124,81,96,60,128,27,	0,392,1044,1206,2443,6146,7838,
#Partially deleted in new
chr19	4174703	4182534	chr19:4174703-4182534	0	-	4174703	4174703	8553170	7	243,124,258,60,183,128,61,	0,324,976,2375,4400,6078,7770,
#Partially deleted in new
chr19	4174703	4182565	chr19:4174703-4182565	0	-	4174703	4174703	8553170	6	243,733,96,60,183,92,	0,324,1138,2375,4400,7770,
#Partially deleted in new
chr19	4174860	4182533	chr19:4174860-4182533	0	-	4175015	4182533	789624	6	291,81,96,60,128,60,	0,819,981,2218,5921,7613,
#Partially deleted in new
chr19	4174877	4182566	chr19:4174877-4182566	0	-	4174877	4174877	8553170	5	69,910,60,128,93,	0,150,2201,5904,7596,
#Partially deleted in new
chr19	4175571	4182534	chr19:4175571-4182534	0	-	4175571	4175571	8553170	6	189,96,60,183,128,61,	0,270,1507,3532,5210,6902,
#Partially deleted in new
chr19	4175790	4179503	chr19:4175790-4179503	0	-	4175790	4175790	8553170	3	147,60,400,	0,1288,3313,
#Partially deleted in new
chr19	4180611	4182546	chr19:4180611-4182546	0	-	4180611	4180611	8553170	2	298,73,	0,1862,
#Partially deleted in new
chr19	4183353	4224814	chr19:4183353-4224814	3	+	4186425	4224505	789624	22	124,188,87,131,89,65,58,71,107,188,38,81,108,39,99,73,119,1614,168,126,66,387,	0,2920,16329,16521,16729,18672,19515,23888,24147,24427,25410,26704,26911,29121,29246,32624,32930,33196,36237,39316,40773,41074,
#Partially deleted in new
chr19	4186269	4224814	chr19:4186269-4224814	1	+	4186425	4224505	789624	21	192,87,131,89,65,58,71,107,188,38,81,108,39,99,73,119,1614,168,126,66,387,	0,13413,13605,13813,15756,16599,20972,21231,21511,22494,23788,23995,26205,26330,29708,30014,30280,33321,36400,37857,38158,
#Partially deleted in new
chr19	4186420	4217766	chr19:4186420-4217766	0	+	4186425	4217766	789624	16	41,131,89,65,58,71,107,188,38,81,108,39,99,73,119,1217,	0,13454,13662,15605,16448,20821,21080,21360,22343,23637,23844,26054,26179,29557,29863,30129,
#Partially deleted in new
chr19	4198139	4224505	chr19:4198139-4224505	1	+	4198139	4224505	789624	20	393,131,89,65,58,71,107,188,38,81,108,39,99,73,119,1614,168,126,66,78,	0,1735,1943,3886,4729,9102,9361,9641,10624,11918,12125,14335,14460,17838,18144,18410,21451,24530,25987,26288,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	4198410	4207904	chr19:4198410-4207904	0	+	4198410	4207298	789624	8	122,131,89,65,27,71,107,124,	0,1464,1672,3615,8697,8831,9090,9370,
#Partially deleted in new
chr19	4208962	4216573	chr19:4208962-4216573	0	+	4208962	4208962	8553170	8	24,81,108,39,99,73,119,24,	0,1095,1302,3512,3637,7015,7321,7587,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	4229497	4237531	chr19:4229497-4237531	3	+	4229550	4237088	789624	5	120,133,179,158,596,	0,1693,3631,5169,7438,
#Partially deleted in new
chr19	4233030	4234758	chr19:4233030-4234758	0	+	4233030	4233030	8553170	2	277,92,	0,1636,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	4246338	4247358	chr19:4246338-4247358	3	-	4246338	4246338	8553170	1	1020,	0,
#Partially deleted in new
chr19	4247078	4269090	chr19:4247078-4269090	3	+	4247146	4268696	789624	8	92,101,145,135,182,121,151,507,	0,2149,3948,7276,11163,14915,20545,21505,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	4248014	4258423	chr19:4248014-4258423	0	+	4249308	4258423	789624	5	237,101,145,135,182,	0,1213,3012,6340,10227,
#Partially deleted in new
chr19	4278600	4290724	chr19:4278600-4290724	3	+	4280063	4290633	789624	6	1760,106,189,124,120,278,	0,4269,4453,6180,9642,11846,
#Partially deleted in new
chr19	4279295	4290691	chr19:4279295-4290691	1	+	4280063	4290633	789624	5	1065,106,189,124,245,	0,3574,3758,5485,11151,
#Partially deleted in new
chr19	4283082	4290653	chr19:4283082-4290653	0	+	4283082	4284790	789624	4	107,124,120,207,	0,1698,5160,7364,
#Partially deleted in new
chr19	4284430	4288314	chr19:4284430-4288314	0	+	4284430	4284430	8553170	3	183,124,72,	0,350,3812,
#Partially deleted in new
chr19	4288191	4290564	chr19:4288191-4290564	0	+	4288191	4288191	8553170	2	171,118,	0,2255,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	4292231	4302431	chr19:4292231-4302431	3	-	4292598	4302385	789624	5	654,114,42,360,92,	0,2335,2543,5754,10108,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	4292231	4302393	chr19:4292231-4302393	1	-	4292598	4302385	789624	5	654,102,42,360,54,	0,2347,2543,5754,10108,
#Partially deleted in new
chr19	4292598	4302385	chr19:4292598-4302385	1	-	4292598	4302385	789624	4	287,114,42,46,	0,1968,2176,9741,
#Partially deleted in new
chr19	4292598	4302385	chr19:4292598-4302385	1	-	4292598	4302385	789624	2	287,46,	0,9741,
#Partially deleted in new
chr19	4304599	4323836	chr19:4304599-4323836	3	+	4304746	4323643	789624	13	162,96,132,102,23,122,210,99,160,80,252,89,304,	0,1346,1598,3282,5673,5875,7242,12582,13746,14272,18386,18748,18933,
#Partially deleted in new
chr19	4304659	4311131	chr19:4304659-4311131	0	+	4304659	4304659	8553170	6	102,57,132,102,23,657,	0,1325,1538,3222,5613,5815,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	4304659	4311577	chr19:4304659-4311577	0	+	4304659	4304659	8553170	6	102,46,132,102,23,1103,	0,1364,1538,3222,5613,5815,
#Partially deleted in new
chr19	4304675	4323806	chr19:4304675-4323806	1	+	4304746	4323557	789624	13	86,96,132,102,23,122,210,99,160,80,161,89,274,	0,1270,1522,3206,5597,5799,7166,12506,13670,14196,18310,18672,18857,
#Partially deleted in new
chr19	4304688	4323093	chr19:4304688-4323093	0	+	4304746	4323093	789624	4	73,96,15,70,	0,1257,1509,18335,
#Partially deleted in new
chr19	4304699	4310755	chr19:4304699-4310755	0	+	4304699	4304699	8553170	6	62,96,132,102,23,281,	0,1246,1498,3182,5573,5775,
#Partially deleted in new
chr19	4306000	4323766	chr19:4306000-4323766	0	+	4306000	4323643	789624	7	41,132,102,23,122,38,195,	0,197,1881,4272,4474,5841,17571,
#Partially deleted in new
chr19	4307938	4318950	chr19:4307938-4318950	0	+	4307938	4307938	8553170	7	45,23,122,210,99,122,79,	0,2334,2536,3903,9243,10445,10933,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	4311472	4323843	chr19:4311472-4323843	0	+	4311472	4311472	8553170	7	579,99,160,80,252,89,311,	0,5709,6873,7399,11513,11875,12060,
#Deleted in new
chr19	4323034	4323665	chr19:4323034-4323665	0	+	4323034	4323643	789624	3	179,89,133,	0,313,498,
#Partially deleted in new
chr19	4324042	4338877	chr19:4324042-4338877	1	-	4324132	4338753	0	13	155,75,93,150,66,103,70,135,101,57,123,72,226,	0,412,1173,1353,2899,3081,3273,4632,5918,7979,9651,9930,14609,
#Partially deleted in new
chr19	4324042	4328773	chr19:4324042-4328773	0	-	4324132	4328773	789624	6	155,75,66,103,70,99,	0,412,2899,3081,3273,4632,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	4324042	4338821	chr19:4324042-4338821	3	-	4324132	4338753	0	13	155,213,93,150,66,103,70,135,101,57,123,72,170,	0,412,1173,1353,2899,3081,3273,4632,5918,7979,9651,9930,14609,
#Partially deleted in new
chr19	4324042	4326952	chr19:4324042-4326952	0	-	4324132	4326952	789624	4	155,93,150,11,	0,1173,1353,2899,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	4324043	4342786	chr19:4324043-4342786	0	-	4333722	4338753	789624	15	154,210,93,150,66,103,70,135,101,53,127,72,50,293,366,	0,411,1172,1352,2898,3080,3272,4631,5917,7978,9646,9929,14171,14608,18377,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	4324816	4327370	chr19:4324816-4327370	0	-	4324816	4324816	8553170	3	492,66,247,	0,2125,2307,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	4324878	4327384	chr19:4324878-4327384	0	-	4324878	4324878	8553170	5	430,150,66,103,69,	0,517,2063,2245,2437,
#Partially deleted in new
chr19	4325417	4328993	chr19:4325417-4328993	0	-	4325417	4325417	8553170	5	128,66,103,70,319,	0,1524,1706,1898,3257,
#Partially deleted in new
chr19	4325458	4338809	chr19:4325458-4338809	0	-	4325458	4338753	789624	9	87,66,103,70,101,53,127,72,158,	0,1483,1665,1857,4502,6563,8231,8514,13193,
#Partially deleted in new
chr19	4339576	4343491	chr19:4339576-4343491	3	+	4339576	4339576	8553170	2	43,236,	0,3679,
#Partially deleted in new
chr19	4343526	4360086	chr19:4343526-4360086	3	+	4343593	4360002	789624	12	74,287,237,133,85,97,73,77,169,71,93,171,	0,181,2218,9370,10518,10797,11422,11570,13726,13988,15636,16389,
#Partially deleted in new
chr19	4343553	4360081	chr19:4343553-4360081	1	+	4343593	4360002	789624	11	47,287,237,133,85,97,169,71,90,93,166,	0,154,2191,9343,10491,10770,13699,13961,14529,15609,16362,
#Partially deleted in new
chr19	4343558	4360072	chr19:4343558-4360072	1	+	4343593	4360002	789624	13	42,287,237,133,85,97,73,77,169,71,90,93,157,	0,149,2186,9338,10486,10765,11390,11538,13694,13956,14524,15604,16357,
#Partially deleted in new
chr19	4343565	4359223	chr19:4343565-4359223	0	+	4343593	4357974	789624	12	35,287,237,133,85,97,73,77,169,71,222,61,	0,142,2179,9331,10479,10758,11383,11531,13687,13949,14385,15597,
#Partially deleted in new
chr19	4343604	4360068	chr19:4343604-4360068	0	+	4343604	4360002	789624	11	390,237,133,85,97,73,77,169,71,93,153,	0,2140,9292,10440,10719,11344,11492,13648,13910,15558,16311,
#Partially deleted in new
chr19	4343710	4360038	chr19:4343710-4360038	0	+	4343710	4360002	789624	12	284,237,133,85,97,73,77,82,71,90,93,123,	0,2034,9186,10334,10613,11238,11386,13629,13804,14372,15452,16205,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	4347779	4349061	chr19:4347779-4349061	7	-	4347779	4347779	16724991	4	100,31,94,109,	0,420,774,1173,
#Partially deleted in new
chr19	4352989	4354577	chr19:4352989-4354577	0	+	4352989	4354564	789624	3	40,85,254,	0,1055,1334,
#Partially deleted in new
chr19	4354948	4360079	chr19:4354948-4360079	0	+	4354948	4360002	789624	4	73,77,93,164,	0,148,4214,4967,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	4356636	4358448	chr19:4356636-4358448	3	-	4356636	4356636	8553170	1	1812,	0,
#Partially deleted in new
chr19	4360369	4400547	chr19:4360369-4400547	3	-	4361599	4400368	789624	10	1427,57,125,104,159,134,144,73,69,224,	0,1959,2242,3000,3350,3718,5112,6131,6556,39954,
#Partially deleted in new
chr19	4360370	4400418	chr19:4360370-4400418	1	-	4361599	4400368	789624	10	1426,57,125,104,159,33,53,73,69,95,	0,1958,2241,2999,3349,3717,5202,6130,6555,39953,
#Partially deleted in new
chr19	4361315	4400525	chr19:4361315-4400525	1	-	4361599	4400368	789624	9	481,57,125,104,159,134,73,69,202,	0,1013,1296,2054,2404,2772,5185,5610,39008,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	4363788	4364640	chr19:4363788-4364640	3	+	4363788	4363788	8553170	2	223,523,	0,329,
#Partially deleted in new
chr19	4363821	4390610	chr19:4363821-4390610	0	-	4363821	4366934	789624	6	57,134,144,73,69,559,	0,266,1660,2679,3104,26230,
#Partially deleted in new
chr19	4363852	4380292	chr19:4363852-4380292	0	-	4363852	4366934	789624	6	26,134,144,73,69,131,	0,235,1629,2648,3073,16309,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	4366502	4396023	chr19:4366502-4396023	0	-	4366502	4366934	789624	3	71,69,479,	0,423,29042,
#Partially deleted in new
chr19	4402661	4443392	chr19:4402661-4443392	3	+	4402762	4443025	789624	15	153,51,857,57,230,61,69,227,169,81,93,256,470,97,468,	0,3250,6241,15358,19904,20673,21144,26002,26776,27046,27887,29290,30408,39583,40263,
#Partially deleted in new
chr19	4402701	4409207	chr19:4402701-4409207	0	+	4402701	4402701	8553170	3	113,51,330,	0,3210,6176,
#Partially deleted in new
chr19	4402716	4409303	chr19:4402716-4409303	0	+	4402762	4409303	789624	2	98,401,	0,6186,
#Partially deleted in new
chr19	4409444	4428863	chr19:4409444-4428863	0	+	4409444	4428863	789624	5	315,230,61,69,200,	0,13121,13890,14361,19219,
#Partially deleted in new
chr19	4418028	4429516	chr19:4418028-4429516	0	+	4418028	4423340	789624	5	48,61,69,227,479,	0,5306,5777,10635,11009,
#Partially deleted in new
chr19	4429688	4430934	chr19:4429688-4430934	3	-	4429688	4429688	8553170	2	451,118,	0,1128,
#Partially deleted in new
chr19	4431054	4433317	chr19:4431054-4433317	0	+	4431054	4431054	8553170	3	60,256,248,	0,897,2015,
#Deleted in new
chr19	4442253	4445018	chr19:4442253-4445018	0	+	4442253	4444599	789624	2	88,475,	0,2290,
#Partially deleted in new
chr19	4444998	4454093	chr19:4444998-4454093	0	-	4445497	4454093	789624	9	625,149,131,220,85,76,98,65,164,	0,1050,1284,1501,1837,2551,3319,8459,8931,
#Partially deleted in new
chr19	4445005	4457822	chr19:4445005-4457822	3	-	4445497	4457697	789624	11	618,149,131,220,85,76,98,129,65,164,208,	0,1043,1277,1494,1830,2544,3312,7358,8452,8924,12609,
#Deleted in new
chr19	4445006	4449604	chr19:4445006-4449604	0	-	4445006	4445006	8553170	1	4598,	0,
#Partially deleted in new
chr19	4445009	4455298	chr19:4445009-4455298	1	-	4445497	4454017	789624	11	614,149,131,220,85,76,98,129,65,164,78,	0,1039,1273,1490,1826,2540,3308,7354,8448,8920,10211,
#Deleted in new
chr19	4445009	4448116	chr19:4445009-4448116	0	-	4445009	4445009	8553170	4	614,365,421,567,	0,1039,1490,2540,
#Deleted in new
chr19	4445090	4446620	chr19:4445090-4446620	0	-	4446115	4446620	789624	3	533,149,121,	0,958,1409,
#Deleted in new
chr19	4445475	4446698	chr19:4445475-4446698	0	-	4445475	4445475	8553170	3	148,365,199,	0,573,1024,
#Deleted in new
chr19	4445977	4446048	chr19:4445977-4446048	3	+	4445977	4445977	5263520	1	71,	0,
#Deleted in new
chr19	4447303	4448217	chr19:4447303-4448217	3	+	4447303	4447303	8553170	2	22,518,	0,396,
#Deleted in new
chr19	4447549	4448870	chr19:4447549-4448870	0	-	4447549	4447549	8553170	2	76,553,	0,768,
#Partially deleted in new
chr19	4447838	4452412	chr19:4447838-4452412	0	-	4447838	4447838	8553170	2	577,49,	0,4525,
#Partially deleted in new
chr19	4448395	4455438	chr19:4448395-4455438	0	-	4448395	4455424	789624	5	20,129,65,164,25,	0,3968,5062,5534,7018,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	4448809	4450836	chr19:4448809-4450836	3	+	4448809	4448809	8553170	1	2027,	0,
#Partially deleted in new
chr19	4454013	4455286	chr19:4454013-4455286	3	+	4454013	4454013	8553170	2	17,493,	0,780,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	4457961	4471279	chr19:4457961-4471279	0	-	4457961	4457961	8553170	2	270,32,	0,13286,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	4457961	4458759	chr19:4457961-4458759	3	-	4457961	4457961	8553170	2	270,208,	0,590,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	4470500	4471493	chr19:4470500-4471493	1	-	4470500	4470500	8553170	2	113,246,	0,747,
#Partially deleted in new
chr19	4472286	4502211	chr19:4472286-4502211	3	+	4472350	4502010	0	16	136,77,139,201,117,72,160,76,310,104,74,71,102,214,127,301,	0,2988,3158,16389,19279,19477,21416,21695,21879,24015,25671,26019,26527,27204,28904,29624,
#Partially deleted in new
chr19	4472305	4502207	chr19:4472305-4502207	1	+	4472350	4502010	0	16	117,77,139,201,117,72,160,76,310,104,74,71,102,214,127,294,	0,2969,3139,16370,19260,19458,21397,21676,21860,23996,25652,26000,26508,27185,28885,29608,
#Partially deleted in new
chr19	4472307	4491682	chr19:4472307-4491682	0	+	4472350	4488682	789624	6	115,77,139,3,197,117,	0,2967,3137,14075,16372,19258,
#Partially deleted in new
chr19	4474891	4493762	chr19:4474891-4493762	0	+	4488762	4493762	789624	7	139,77,139,201,117,72,60,	0,383,553,13784,16674,16872,18811,
#Partially deleted in new
chr19	4474911	4488836	chr19:4474911-4488836	0	+	4488762	4488836	789624	3	440,139,161,	0,533,13764,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	4475348	4502201	chr19:4475348-4502201	0	+	4475348	4497156	789624	15	3,139,201,117,72,160,76,310,104,1113,71,102,214,127,291,	0,96,13327,16217,16415,18354,18633,18817,20953,21570,22957,23465,24142,25842,26562,
#Partially deleted in new
chr19	4496332	4502104	chr19:4496332-4502104	0	+	4496332	4501761	789624	6	73,74,71,102,114,436,	0,1625,1973,2481,3158,5336,
#Partially deleted in new
chr19	4498361	4502208	chr19:4498361-4502208	0	+	4498361	4501321	789624	4	15,102,214,1018,	0,452,1129,2829,
#Partially deleted in new
chr19	4499588	4502033	chr19:4499588-4502033	0	+	4499588	4502010	789624	2	116,123,	0,2322,
#Partially deleted in new
chr19	4499628	4501578	chr19:4499628-4501578	0	+	4499628	4501465	789624	3	76,127,117,	0,1562,1833,
#Partially deleted in new
chr19	4502179	4517704	chr19:4502179-4517704	3	-	4504458	4517704	789624	6	2606,87,188,3259,62,151,	0,2681,6588,8266,14437,15374,
#Partially deleted in new
chr19	4502191	4518465	chr19:4502191-4518465	1	-	4504458	4518272	789624	8	2594,87,188,3259,62,145,68,81,	0,2669,6576,8254,14425,15362,16030,16193,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	4522530	4535224	chr19:4522530-4535224	3	-	4523527	4534074	789624	8	1555,114,200,181,83,196,81,60,	0,2432,3102,6542,7253,9096,11484,12634,
#Partially deleted in new
chr19	4523908	4525849	chr19:4523908-4525849	0	-	4523908	4523908	8553170	3	177,114,217,	0,1054,1724,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	4528426	4540067	chr19:4528426-4540067	3	-	4531680	4540013	789624	4	1440,196,81,86,	0,3200,5588,11555,
#Partially deleted in new
chr19	4529277	4535185	chr19:4529277-4535185	0	-	4529277	4529277	8553170	4	589,196,81,21,	0,2349,4737,5887,
#Partially deleted in new
chr19	4529409	4535224	chr19:4529409-4535224	0	-	4529409	4529409	8553170	5	177,83,196,81,60,	0,374,2217,4605,5755,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	4532371	4534274	chr19:4532371-4534274	1	-	4533897	4534074	789624	1	1903,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	4533248	4535224	chr19:4533248-4535224	1	-	4533897	4534074	789624	2	847,60,	0,1916,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	4536408	4540474	chr19:4536408-4540474	3	-	4537939	4540013	789624	2	2543,493,	0,3573,
#Partially deleted in new
chr19	4538473	4540036	chr19:4538473-4540036	0	-	4538473	4538473	8553170	3	419,97,55,	0,614,1508,
#Partially deleted in new
chr19	4542592	4559808	chr19:4542592-4559808	3	-	4543600	4558457	789624	17	1937,59,78,147,183,150,132,218,89,120,91,102,63,61,124,153,279,	0,3623,3799,5434,5670,7530,8206,9829,11795,12383,12881,13395,14358,14570,15433,15744,16937,
#Partially deleted in new
chr19	4542913	4558457	chr19:4542913-4558457	1	-	4542913	4558457	789624	17	183,113,59,78,147,183,150,132,218,89,120,91,102,63,61,124,121,	0,1503,3302,3478,5113,5349,7209,7885,9508,11474,12062,12560,13074,14037,14249,15112,15423,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	4545789	4546469	chr19:4545789-4546469	0	-	4545789	4545789	8553170	2	485,78,	0,602,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	4621193	4622307	chr19:4621193-4622307	7	+	4621193	4621193	16724991	3	43,154,289,	0,363,825,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	4639517	4655568	chr19:4639517-4655568	3	+	4651869	4652430	789624	2	112,3702,	0,12349,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	4639536	4642482	chr19:4639536-4642482	0	+	4639536	4639536	8553170	1	2946,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	4640016	4655568	chr19:4640016-4655568	1	+	4651869	4652430	789624	2	143,3702,	0,11850,
#Partially deleted in new
chr19	4641373	4664906	chr19:4641373-4664906	0	-	4641582	4664906	789624	4	277,73,82,31,	0,18557,19295,23502,
#Deleted in new
chr19	4654963	4655524	chr19:4654963-4655524	3	-	4654963	4654963	8553170	2	59,333,	0,228,
#Partially deleted in new
chr19	4657544	4670370	chr19:4657544-4670370	3	-	4658004	4670334	789624	6	540,73,82,62,51,210,	0,2386,3124,7331,11050,12616,
#Partially deleted in new
chr19	4659687	4670362	chr19:4659687-4670362	1	-	4659802	4670334	789624	5	316,82,62,51,202,	0,981,5188,8907,10473,
#Partially deleted in new
chr19	4660579	4668696	chr19:4660579-4668696	0	-	4660579	4660579	8553170	3	171,62,102,	0,4296,8015,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr19	4675223	4714306	chr19:4675223-4714306	1	-	4676563	4714306	0	19	1352,112,143,153,147,146,136,153,80,163,178,101,62,129,114,169,174,113,226,	0,4611,7472,8253,9439,10402,13533,14346,15654,19437,20154,22327,24992,26803,27379,28662,28907,30634,38857,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr19	4675225	4723863	chr19:4675225-4723863	3	-	4676563	4719906	0	22	1431,112,143,153,147,146,136,153,80,163,178,101,62,129,114,169,174,113,257,91,53,190,	0,4609,7470,8251,9437,10400,13531,14344,15652,19435,20152,22325,24990,26801,27377,28660,28905,30632,38855,44625,47273,48448,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr19	4675763	4714220	chr19:4675763-4714220	0	-	4675763	4675763	8553170	19	893,112,143,135,153,1109,136,153,80,163,178,101,62,129,114,169,174,113,140,	0,4071,6932,7426,7713,8899,12993,13806,15114,18897,19614,21787,24452,26263,26839,28122,28367,30094,38317,
#Partially deleted in new
chr19	4676463	4688803	chr19:4676463-4688803	0	-	4676600	4688803	789624	6	193,112,153,147,146,47,	0,3371,7013,8199,9162,12293,
#Partially deleted in new
chr19	4676563	4723806	chr19:4676563-4723806	1	-	4676563	4714306	0	23	93,112,143,153,147,146,136,153,80,163,178,101,62,129,114,169,174,113,257,198,91,53,133,	0,3271,6132,6913,8099,9062,12193,13006,14314,18097,18814,20987,23652,25463,26039,27322,27567,29294,37517,38965,43287,45935,47110,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	4679281	4685948	chr19:4679281-4685948	3	+	4679281	4679281	8553170	3	258,575,2238,	0,3519,4429,
#Partially deleted in new
chr19	4679834	4685683	chr19:4679834-4685683	0	-	4683219	4685683	789624	6	112,143,135,153,147,58,	0,2861,3355,3642,4828,5791,
#Partially deleted in new
chr19	4679836	4685747	chr19:4679836-4685747	0	-	4684796	4685747	789624	5	110,143,153,200,122,	0,2859,3640,4826,5789,
#Partially deleted in new
chr19	4682943	4684810	chr19:4682943-4684810	0	-	4682943	4682943	8553170	3	381,153,148,	0,533,1719,
#Partially deleted in new
chr19	4685627	4690906	chr19:4685627-4690906	0	-	4685627	4690906	789624	4	144,136,114,29,	0,3129,3942,5250,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	4688291	4694735	chr19:4688291-4694735	0	-	4688291	4688291	8553170	4	601,153,80,75,	0,1278,2586,6369,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	4689655	4695094	chr19:4689655-4695094	0	-	4689655	4689655	8553170	3	67,80,434,	0,1222,5005,
#Partially deleted in new
chr19	4690877	4704151	chr19:4690877-4704151	0	-	4700250	4704151	789624	8	80,163,101,58,129,114,169,21,	0,3783,6673,9338,11149,11725,13008,13253,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	4694316	4723750	chr19:4694316-4723750	1	-	4694619	4719906	789624	13	507,178,101,62,129,114,169,174,113,257,91,53,77,	0,1061,3234,5899,7710,8286,9569,9814,11541,19764,25534,28182,29357,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	4694317	4723813	chr19:4694317-4723813	0	-	4694317	4694317	8553170	12	506,101,62,129,114,169,174,113,257,91,53,140,	0,3233,5898,7709,8285,9568,9813,11540,19763,25533,28181,29356,
#Partially deleted in new
chr19	4702683	4723842	chr19:4702683-4723842	0	-	4702683	4704133	789624	6	33,169,127,19,53,169,	0,1202,1447,17239,19815,20990,
#Partially deleted in new
chr19	4705862	4722772	chr19:4705862-4722772	0	-	4705862	4719906	789624	5	108,257,91,53,116,	0,8218,13988,16636,16794,
#Partially deleted in new
chr19	4705914	4723835	chr19:4705914-4723835	0	-	4705914	4719906	789624	4	56,257,91,162,	0,8166,13936,17759,
#Partially deleted in new
chr19	4705925	4722731	chr19:4705925-4722731	0	-	4705925	4719906	789624	4	45,257,91,233,	0,8155,13925,16573,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	4714105	4724673	chr19:4714105-4724673	0	-	4714105	4719906	789624	5	232,91,53,126,40,	0,5745,8393,10301,10528,
#Partially deleted in new
chr19	4714160	4723842	chr19:4714160-4723842	0	-	4714160	4719906	789624	5	177,91,110,53,169,	0,5690,8034,8338,9513,
#Partially deleted in new
chr19	4714186	4723830	chr19:4714186-4723830	0	-	4714186	4714186	8553170	5	151,100,91,53,157,	0,1866,5664,8312,9487,
#Partially deleted in new
chr19	4714203	4717888	chr19:4714203-4717888	0	-	4714203	4717682	789624	2	134,274,	0,3411,
#Partially deleted in new
chr19	4714245	4716127	chr19:4714245-4716127	0	-	4714245	4714306	789624	2	92,463,	0,1419,
#Partially deleted in new
chr19	4715889	4723782	chr19:4715889-4723782	0	-	4715889	4715889	8553170	5	263,91,110,53,109,	0,3961,6305,6609,7784,
#Partially deleted in new
chr19	4719617	4723797	chr19:4719617-4723797	0	-	4719617	4719617	8553170	3	324,53,124,	0,2881,4056,
#Partially deleted in new
chr19	4769139	4772533	chr19:4769139-4772533	0	+	4769139	4769139	789624	3	212,128,370,	0,490,3024,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	4769139	4772533	chr19:4769139-4772533	0	+	4769139	4769139	8553170	5	212,128,67,102,370,	0,490,1015,1208,3024,
#Partially deleted in new
chr19	4769140	4772517	chr19:4769140-4772517	0	+	4769140	4769140	8553170	3	211,128,386,	0,489,2991,
#Partially deleted in new
chr19	4769141	4772499	chr19:4769141-4772499	0	+	4769141	4769141	8553170	4	28,68,128,336,	0,142,488,3022,
#Partially deleted in new
chr19	4769166	4772414	chr19:4769166-4772414	2	+	4769166	4769166	8553170	3	185,151,251,	0,440,2997,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	4769185	4770400	chr19:4769185-4770400	0	+	4769185	4769185	8553170	4	166,128,134,53,	0,444,902,1162,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	4769280	4772517	chr19:4769280-4772517	1	+	4769280	4769280	8553170	6	71,110,137,102,91,354,	0,367,804,1067,1243,2883,
#Partially deleted in new
chr19	4769280	4772362	chr19:4769280-4772362	0	+	4769280	4769280	8553170	3	71,180,199,	0,297,2883,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	4770148	4772533	chr19:4770148-4772533	0	+	4770148	4770148	8553170	4	73,102,69,370,	0,199,397,2015,
#Partially deleted in new
chr19	4770372	4772514	chr19:4770372-4772514	0	+	4770372	4770372	8553170	3	77,69,383,	0,173,1759,
#Deleted in new
chr19	4770669	4770779	chr19:4770669-4770779	3	+	4770669	4770669	5263520	1	110,	0,
#Partially deleted in new
chr19	4785119	4791207	chr19:4785119-4791207	3	-	4785119	4785119	8553170	2	408,10,	0,6078,
#Duplicated in new
chr19	4791680	4801273	chr19:4791680-4801273	3	+	4791854	4793864	789624	1	9593,	0,
#Deleted in new
chr19	4791744	4795555	chr19:4791744-4795555	3	-	4791744	4791744	8553170	2	269,3299,	0,512,
#Deleted in new
chr19	4794981	4795559	chr19:4794981-4795559	0	-	4794981	4794981	8553170	2	110,293,	0,285,
#Partially deleted in new
chr19	4815931	4831704	chr19:4815931-4831704	3	-	4816238	4818377	0	2	2585,91,	0,15682,
#Deleted in new
chr19	4816234	4817970	chr19:4816234-4817970	1	-	4816238	4817965	789624	7	166,1410,3,39,3,12,17,	0,247,1658,1662,1702,1706,1719,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	4838331	4838907	chr19:4838331-4838907	3	+	4838331	4838331	8553170	2	79,432,	0,144,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	4838340	4867768	chr19:4838340-4867768	3	-	4839191	4861394	789624	8	1196,126,200,286,83,199,83,160,	0,6327,9350,13675,21249,21485,22988,29268,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	4838368	4867653	chr19:4838368-4867653	1	-	4839191	4861394	789624	8	1168,126,200,250,83,199,83,45,	0,6299,9322,13647,21221,21457,22960,29240,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	4838370	4859636	chr19:4838370-4859636	0	-	4839191	4859636	789624	5	1166,126,74,286,47,	0,6297,9446,13645,21219,
#Partially deleted in new
chr19	4839061	4867694	chr19:4839061-4867694	1	-	4839191	4861394	789624	8	472,126,200,286,83,199,83,86,	0,5606,8629,12954,20528,20764,22267,28547,
#Partially deleted in new
chr19	4852038	4867637	chr19:4852038-4867637	0	-	4852038	4859997	789624	4	263,83,199,29,	0,7551,7787,15570,
#Partially deleted in new
chr19	4852207	4867663	chr19:4852207-4867663	0	-	4852207	4866925	789624	6	94,83,199,83,115,55,	0,7382,7618,9121,14672,15401,
#Partially deleted in new
chr19	4859983	4867112	chr19:4859983-4867112	0	-	4859983	4861394	789624	3	41,83,480,	0,1345,6649,
#Partially deleted in new
chr19	4890436	4902867	chr19:4890436-4902867	3	-	4891045	4902867	789624	3	1137,206,295,	0,6234,12136,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr19	4903079	4962154	chr19:4903079-4962154	1	+	4910885	4960803	0	17	566,163,255,161,216,101,187,124,108,105,107,163,138,139,173,105,1498,	0,7796,26142,27636,29661,38448,38665,41052,41263,42781,44025,47531,47779,51270,51570,53629,57577,
#Partially deleted in new
chr19	4909429	4962150	chr19:4909429-4962150	1	+	4909473	4960803	789624	17	226,163,255,161,216,101,187,124,108,105,107,163,138,139,173,105,1494,	0,1446,19792,21286,23311,32098,32315,34702,34913,36431,37675,41181,41429,44920,45220,47279,51227,
#Partially deleted in new
chr19	4909497	4961171	chr19:4909497-4961171	0	+	4909497	4960803	789624	12	158,24,124,108,105,107,163,138,139,173,105,515,	0,32410,34634,34845,36363,37607,41113,41361,44852,45152,47211,51159,
#Partially deleted in new
chr19	4909497	4962151	chr19:4909497-4962151	1	+	4910885	4960803	0	17	158,163,255,161,216,101,187,124,108,105,107,163,138,139,173,105,1495,	0,1378,19724,21218,23243,32030,32247,34634,34845,36363,37607,41113,41361,44852,45152,47211,51159,
#Partially deleted in new
chr19	4910145	4960961	chr19:4910145-4960961	1	+	4910885	4960803	0	17	101,163,255,161,216,101,187,124,108,105,107,163,138,139,173,105,305,	0,730,19076,20570,22595,31382,31599,33986,34197,35715,36959,40465,40713,44204,44504,46563,50511,
#Partially deleted in new
chr19	4910366	4961132	chr19:4910366-4961132	3	+	4910846	4960803	789624	16	672,255,161,216,101,187,124,108,105,107,163,138,139,173,105,476,	0,18855,20349,22374,31161,31378,33765,33976,35494,36738,40244,40492,43983,44283,46342,50290,
#Partially deleted in new
chr19	4910374	4960952	chr19:4910374-4960952	1	+	4910885	4960803	0	17	120,163,255,161,216,101,187,124,108,105,107,163,138,139,173,105,296,	0,501,18847,20341,22366,31153,31370,33757,33968,35486,36730,40236,40484,43975,44275,46334,50282,
#Deleted in new
chr19	4932686	4932740	chr19:4932686-4932740	3	+	4932686	4932686	5263520	1	54,	0,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr19	4969112	5153595	chr19:4969112-5153595	1	+	5032890	5151511	789624	24	118,83,166,176,115,194,50,104,138,197,102,200,470,121,179,223,77,56,109,186,165,120,93,2261,	0,47144,63753,70723,72024,78363,101897,108254,113254,141509,150005,150540,161963,162774,164770,166226,168149,168508,168849,174854,175135,175670,181245,182222,
#Partially deleted in new
chr19	4969113	5041181	chr19:4969113-5041181	0	+	5032890	5041181	789624	4	117,166,176,45,	0,63752,70722,72023,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr19	4969120	5153595	chr19:4969120-5153595	3	+	5032890	5151511	789624	23	110,83,166,176,115,194,50,104,138,197,200,470,121,179,223,77,56,109,186,165,120,93,2261,	0,47136,63745,70715,72016,78355,101889,108246,113246,141501,150532,161955,162766,164762,166218,168141,168500,168841,174846,175127,175662,181237,182214,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	4969131	5113340	chr19:4969131-5113340	1	+	5032890	5111836	789624	12	99,83,166,176,115,194,50,104,138,197,170,1566,	0,47125,63734,70704,72005,78344,101878,108235,113235,141490,142243,142643,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr19	5016324	5153105	chr19:5016324-5153105	1	+	5032890	5151511	789624	23	15,166,176,115,194,50,104,138,197,102,200,470,121,179,223,77,56,109,186,165,120,93,1771,	0,16541,23511,24812,31151,54685,61042,66042,94297,102793,103328,114751,115562,117558,119014,120937,121296,121637,127642,127923,128458,134033,135010,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	5046997	5082437	chr19:5046997-5082437	0	+	5046997	5046997	8553170	5	143,194,50,104,71,	0,478,24012,30369,35369,
#Partially deleted in new
chr19	5070617	5151924	chr19:5070617-5151924	0	+	5070617	5070617	8553170	17	442,104,138,197,200,470,121,179,223,77,56,109,186,165,120,93,590,	0,6749,11749,40004,49035,60458,61269,63265,64721,66644,67003,67344,73349,73630,74165,79740,80717,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	5074090	5079166	chr19:5074090-5079166	0	+	5074090	5074090	8553170	1	5076,	0,
#Partially deleted in new
chr19	5080687	5110734	chr19:5080687-5110734	0	+	5080687	5080687	8553170	3	309,138,113,	0,1679,29934,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	5082451	5141503	chr19:5082451-5141503	0	+	5082451	5140335	789624	12	53,197,102,200,470,121,179,223,77,56,109,1252,	0,28170,36666,37201,48624,49435,51431,52887,54810,55169,55510,57800,
#Partially deleted in new
chr19	5112357	5119682	chr19:5112357-5119682	0	+	5112357	5112357	8553170	3	279,102,30,	0,6760,7295,
#Deleted in new
chr19	5135535	5138470	chr19:5135535-5138470	0	+	5135535	5135535	8553170	5	26,77,56,109,209,	0,1726,2085,2426,2726,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr19	5158494	5340803	chr19:5158494-5340803	0	-	5158494	5158494	8553170	31	610,114,136,155,126,127,179,286,155,120,176,124,98,48,113,12,158,216,94,254,98,145,134,582,270,111,189,142,146,185,140,	0,15474,49427,49742,51974,52184,53095,53470,53842,55866,56066,56794,57003,58225,59925,60292,60815,61444,61765,62505,63628,80424,81704,85406,87281,99522,106513,114947,115704,127555,182169,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	5178118	5178464	chr19:5178118-5178464	3	+	5178118	5178118	8553170	1	346,	0,
#Partially deleted in new
chr19	5206367	5286240	chr19:5206367-5286240	1	-	5206773	5286140	0	37	475,136,155,126,127,179,286,155,120,176,124,98,48,113,12,158,216,94,254,98,609,118,27,194,306,145,134,582,270,12,111,18,9,189,142,146,191,	0,1554,1869,4101,4311,5222,5597,5969,7993,8193,8921,9130,10352,12052,12419,12942,13571,13892,14632,15755,16321,19359,22948,23123,24942,32551,33831,37533,39408,49740,51649,54437,56596,58640,67074,67831,79682,
#Partially deleted in new
chr19	5206536	5286163	chr19:5206536-5286163	1	-	5206773	5286140	789624	28	306,136,155,126,127,179,286,155,120,176,124,98,115,9,159,216,94,254,98,145,134,582,270,111,189,142,146,114,	0,1385,1700,3932,4142,5053,5428,5800,7824,8024,8752,8961,11883,12762,12772,13402,13723,14463,15586,32382,33662,37364,39239,51480,58471,66905,67662,79513,
#Partially deleted in new
chr19	5206536	5286163	chr19:5206536-5286163	3	-	5206773	5286140	0	32	306,136,155,126,127,179,286,155,120,176,124,98,113,12,158,216,94,254,98,609,118,194,306,145,134,582,270,111,189,142,146,114,	0,1385,1700,3932,4142,5053,5428,5800,7824,8024,8752,8961,11883,12250,12773,13402,13723,14463,15586,16152,19190,22954,24773,32382,33662,37364,39239,51480,58471,66905,67662,79513,
#Partially deleted in new
chr19	5206536	5286163	chr19:5206536-5286163	1	-	5206773	5286140	0	28	306,136,155,126,127,179,286,155,120,176,124,98,113,12,158,216,94,254,98,145,134,582,270,111,189,142,146,114,	0,1385,1700,3932,4142,5053,5428,5800,7824,8024,8752,8961,11883,12250,12773,13402,13723,14463,15586,32382,33662,37364,39239,51480,58471,66905,67662,79513,
#Partially deleted in new
chr19	5206773	5286140	chr19:5206773-5286140	1	-	5206773	5286140	789624	29	69,136,155,126,127,179,286,155,120,176,124,98,113,12,158,216,94,254,98,145,134,582,270,12,111,189,142,146,91,	0,1148,1463,3695,3905,4816,5191,5563,7587,7787,8515,8724,11646,12013,12536,13165,13486,14226,15349,32145,33425,37127,39002,49334,51243,58234,66668,67425,79276,
#Partially deleted in new
chr19	5215366	5220016	chr19:5215366-5220016	0	-	5215366	5215366	8553170	4	46,98,1048,78,	0,131,3053,4572,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	5273060	5286388	chr19:5273060-5286388	1	-	5273318	5286140	789624	4	266,142,146,339,	0,381,1138,12989,
#Partially deleted in new
chr19	5273548	5293252	chr19:5273548-5293252	0	-	5273548	5286140	789624	4	35,146,185,112,	0,650,12501,19592,
#Partially deleted in new
chr19	5274198	5292787	chr19:5274198-5292787	0	-	5274198	5286140	789624	3	146,185,57,	0,11851,18532,
#Deleted in new
chr19	5277733	5278133	chr19:5277733-5278133	7	+	5277733	5277733	16724991	1	400,	0,
#Partially deleted in new
chr19	5294246	5294696	chr19:5294246-5294696	3	+	5294246	5294246	8553170	1	450,	0,
#Deleted in new
chr19	5455430	5456856	chr19:5455430-5456856	3	+	5455491	5456781	789624	1	1426,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	5558166	5568034	chr19:5558166-5568034	1	-	5562207	5567924	789624	3	3233,130,370,	0,3915,9498,
#Partially deleted in new
chr19	5560773	5578349	chr19:5560773-5578349	0	-	5560773	5560773	8553170	3	626,130,190,	0,1308,17386,
#Partially deleted in new
chr19	5561033	5562298	chr19:5561033-5562298	0	-	5561033	5561033	8553170	2	366,217,	0,1048,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	5561631	5567831	chr19:5561631-5567831	0	-	5562207	5567831	789624	3	105,130,167,	0,450,6033,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	5562635	5567953	chr19:5562635-5567953	3	-	5562846	5567924	789624	2	314,289,	0,5029,
#Partially deleted in new
chr19	5576659	5576938	chr19:5576659-5576938	7	-	5576659	5576659	16724991	1	279,	0,
#Partially deleted in new
chr19	5586998	5622980	chr19:5586998-5622980	3	-	5587242	5622715	789624	21	401,67,113,131,46,141,288,137,92,131,113,150,101,50,511,28,63,204,65,88,451,	0,702,869,3279,4749,5748,6892,8362,11794,13131,17584,17788,22996,23640,24121,25541,26466,29133,29423,34310,35531,
#Partially deleted in new
chr19	5587109	5589020	chr19:5587109-5589020	0	-	5587109	5587109	8553170	4	290,67,113,113,	0,591,758,1798,
#Partially deleted in new
chr19	5587867	5593705	chr19:5587867-5593705	0	-	5587867	5587867	8553170	5	113,131,46,141,75,	0,2410,3880,4879,5763,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	5591295	5592881	chr19:5591295-5592881	0	-	5591295	5591295	8553170	2	498,135,	0,1451,
#Deleted in new
chr19	5598484	5600172	chr19:5598484-5600172	0	-	5598484	5598484	8553170	2	400,43,	0,1645,
#Partially deleted in new
chr19	5598831	5616278	chr19:5598831-5616278	0	-	5610662	5616278	789624	9	53,131,113,150,101,50,28,63,147,	0,1298,5751,5955,11163,11807,13708,14633,17300,
#Partially deleted in new
chr19	5600199	5612473	chr19:5600199-5612473	0	-	5600199	5600199	8553170	5	61,113,150,101,1835,	0,4383,4587,9795,10439,
#Partially deleted in new
chr19	5600213	5610235	chr19:5600213-5610235	0	-	5600213	5600213	8553170	4	47,113,150,241,	0,4369,4573,9781,
#Partially deleted in new
chr19	5600225	5610611	chr19:5600225-5610611	0	-	5600225	5600225	8553170	5	35,113,150,101,323,	0,4357,4561,9769,10063,
#Partially deleted in new
chr19	5611875	5622776	chr19:5611875-5622776	0	-	5616261	5622715	789624	5	692,63,208,88,247,	0,1589,4252,9433,10654,
#Partially deleted in new
chr19	5612519	5624046	chr19:5612519-5624046	0	-	5612519	5616478	789624	6	48,63,204,65,88,96,	0,945,3612,3902,8789,11431,
#Partially deleted in new
chr19	5623034	5668349	chr19:5623034-5668349	0	+	5623205	5645383	789624	19	360,85,63,28,511,50,95,150,83,140,89,107,288,138,43,119,104,67,188,	0,3370,22302,24981,25954,26891,27943,30080,30303,31026,31333,34206,38486,40987,41362,44011,44312,44785,45127,
#Partially deleted in new
chr19	5623082	5648187	chr19:5623082-5648187	0	+	5623082	5623082	8553170	4	312,85,63,172,	0,3322,22254,24933,
#Partially deleted in new
chr19	5623098	5668478	chr19:5623098-5668478	3	+	5623205	5668291	789624	21	296,85,65,207,63,28,511,50,95,150,83,140,89,107,291,138,43,119,98,67,317,	0,3306,18495,18641,22238,24917,25890,26827,27879,30016,30239,30962,31269,34142,38419,40923,41298,43947,44254,44721,45063,
#Partially deleted in new
chr19	5623117	5668466	chr19:5623117-5668466	1	+	5623205	5668291	789624	21	277,85,65,207,63,28,511,50,95,150,83,140,89,107,288,138,43,119,104,67,305,	0,3287,18476,18622,22219,24898,25871,26808,27860,29997,30220,30943,31250,34123,38403,40904,41279,43928,44229,44702,45044,
#Partially deleted in new
chr19	5623120	5653242	chr19:5623120-5653242	0	+	5623120	5623120	8553170	9	274,85,65,207,63,28,50,95,128,	0,3284,18473,18619,22216,24895,26805,27857,29994,
#Partially deleted in new
chr19	5623138	5668327	chr19:5623138-5668327	1	+	5623205	5668291	789624	20	256,85,65,63,28,511,50,95,150,83,140,89,107,291,138,43,119,104,67,166,	0,3266,18455,22198,24877,25850,26787,27839,29976,30199,30922,31229,34102,38379,40883,41258,43907,44208,44681,45023,
#Partially deleted in new
chr19	5623152	5668326	chr19:5623152-5668326	1	+	5623205	5668291	789624	21	242,85,65,207,63,28,511,50,95,150,83,140,89,107,291,138,43,119,104,67,165,	0,3252,18441,18587,22184,24863,25836,26773,27825,29962,30185,30908,31215,34088,38365,40869,41244,43893,44194,44667,45009,
#Partially deleted in new
chr19	5641850	5648404	chr19:5641850-5648404	0	+	5641850	5641850	8553170	3	96,63,389,	0,3486,6165,
#Partially deleted in new
chr19	5648854	5653264	chr19:5648854-5653264	0	+	5648854	5648854	8553170	4	645,50,95,150,	0,1071,2123,4260,
#Partially deleted in new
chr19	5649683	5653420	chr19:5649683-5653420	0	+	5649683	5649683	8553170	4	292,95,150,83,	0,1294,3431,3654,
#Partially deleted in new
chr19	5657324	5664136	chr19:5657324-5664136	0	+	5657324	5664136	789624	3	23,321,115,	0,4163,6697,
#Deleted in new
chr19	5664128	5664762	chr19:5664128-5664762	0	+	5664128	5664128	8553170	2	31,366,	0,268,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	5664725	5668471	chr19:5664725-5668471	0	+	5664725	5664725	8553170	2	3161,310,	0,3436,
#Deleted in new
chr19	5666655	5668478	chr19:5666655-5668478	0	+	5666655	5666655	8553170	3	509,534,317,	0,697,1506,
#Partially deleted in new
chr19	5674946	5691667	chr19:5674946-5691667	3	+	5690507	5691621	0	5	26,57,95,135,136,	0,15386,15559,16372,16585,
#Partially deleted in new
chr19	5678421	5680896	chr19:5678421-5680896	3	-	5678550	5680486	789624	4	227,52,178,439,	0,923,1164,2036,
#Partially deleted in new
chr19	5678421	5680252	chr19:5678421-5680252	1	-	5678550	5680149	789624	4	227,52,178,198,	0,923,1164,1633,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	5678831	5680194	chr19:5678831-5680194	1	-	5679222	5680149	789624	4	399,52,178,140,	0,513,754,1223,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	5678914	5680488	chr19:5678914-5680488	1	-	5679222	5680486	789624	4	316,52,178,31,	0,430,671,1543,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	5679043	5680510	chr19:5679043-5680510	0	-	5679043	5679043	8553170	2	720,53,	0,1414,
#Partially deleted in new
chr19	5680603	5687304	chr19:5680603-5687304	0	+	5684832	5687304	789624	6	668,125,131,112,92,23,	0,4177,4385,5812,6296,6678,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	5680764	5688522	chr19:5680764-5688522	1	+	5684832	5688195	789624	6	507,87,92,94,166,607,	0,4054,6135,6517,6738,7151,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	5681008	5688522	chr19:5681008-5688522	1	+	5686985	5687945	789624	6	263,155,92,94,166,770,	0,3956,5891,6273,6494,6744,
#Partially deleted in new
chr19	5681016	5687597	chr19:5681016-5687597	0	+	5684832	5686486	789624	6	255,87,112,92,94,95,	0,3802,5399,5883,6265,6486,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	5681023	5688522	chr19:5681023-5688522	1	+	5684832	5687945	789624	6	248,87,92,94,166,770,	0,3795,5876,6258,6479,6729,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	5681023	5688522	chr19:5681023-5688522	1	+	5686985	5688195	789624	6	248,155,92,94,166,607,	0,3941,5876,6258,6479,6892,
#Partially deleted in new
chr19	5681026	5690327	chr19:5681026-5690327	0	+	5681026	5681026	8553170	2	245,297,	0,9004,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	5681035	5688522	chr19:5681035-5688522	1	+	5684832	5688195	789624	8	236,87,131,112,92,94,166,607,	0,3783,3953,5380,5864,6246,6467,6880,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	5681036	5688522	chr19:5681036-5688522	0	+	5684832	5686923	789624	7	235,87,131,92,94,166,770,	0,3782,3952,5863,6245,6466,6716,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	5681036	5688484	chr19:5681036-5688484	1	+	5686985	5687945	789624	5	235,92,94,166,732,	0,5863,6245,6466,6716,
#Partially deleted in new
chr19	5681036	5687576	chr19:5681036-5687576	0	+	5684832	5685018	789624	6	235,87,127,92,94,74,	0,3782,3956,5863,6245,6466,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	5681040	5688522	chr19:5681040-5688522	3	+	5686472	5687945	789624	7	231,155,112,92,94,166,770,	0,3924,5375,5859,6241,6462,6712,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	5681047	5685589	chr19:5681047-5685589	1	+	5684832	5685361	789624	4	224,87,131,288,	0,3771,3941,4254,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	5681053	5688522	chr19:5681053-5688522	0	+	5681053	5681053	8553170	6	218,301,92,94,166,770,	0,3765,5846,6228,6449,6699,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	5681054	5685328	chr19:5681054-5685328	0	+	5681054	5681054	8553170	3	217,155,27,	0,3910,4247,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	5681060	5688493	chr19:5681060-5688493	1	+	5684832	5687945	789624	10	211,100,150,87,131,112,92,94,166,741,	0,2961,3140,3758,3928,5355,5839,6221,6442,6692,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	5681063	5688522	chr19:5681063-5688522	1	+	5684832	5687945	789624	8	208,87,131,112,92,94,166,770,	0,3755,3925,5352,5836,6218,6439,6689,
#Partially deleted in new
chr19	5681144	5687308	chr19:5681144-5687308	0	+	5684832	5686923	789624	5	127,125,131,92,27,	0,3636,3844,5755,6137,
#Partially deleted in new
chr19	5681158	5687987	chr19:5681158-5687987	0	+	5684832	5687987	789624	5	113,87,94,166,235,	0,3660,6123,6344,6594,
#Partially deleted in new
chr19	5681168	5687945	chr19:5681168-5687945	0	+	5681168	5681168	8553170	7	103,301,112,92,94,166,193,	0,3650,5247,5731,6113,6334,6584,
#Partially deleted in new
chr19	5681181	5691633	chr19:5681181-5691633	1	+	5690507	5691621	0	6	90,155,297,95,135,102,	0,3783,8849,9324,10137,10350,
#Partially deleted in new
chr19	5684854	5688126	chr19:5684854-5688126	0	+	5684854	5687672	789624	4	51,92,94,624,	0,2045,2427,2648,
#Deleted in new
chr19	5687364	5688137	chr19:5687364-5688137	0	+	5687364	5687364	8553170	2	304,385,	0,388,
#Deleted in new
chr19	5690195	5691876	chr19:5690195-5691876	1	+	5690507	5691621	0	4	132,95,135,345,	0,310,1123,1336,
#Deleted in new
chr19	5690294	5690931	chr19:5690294-5690931	0	+	5690507	5690931	789624	3	33,95,111,	0,211,526,
#Deleted in new
chr19	5690305	5691653	chr19:5690305-5691653	1	+	5690507	5691510	789624	3	22,95,335,	0,200,1013,
#Deleted in new
chr19	5690305	5691390	chr19:5690305-5691390	0	+	5690305	5690305	8553170	2	22,885,	0,200,
#Deleted in new
chr19	5690315	5691667	chr19:5690315-5691667	1	+	5690507	5691621	0	3	285,135,136,	0,1003,1216,
#Partially deleted in new
chr19	5691833	5720290	chr19:5691833-5720290	3	-	5692031	5720132	0	18	375,165,218,166,141,117,123,88,179,139,221,84,130,62,232,120,89,587,	0,1464,1718,2553,2927,4220,4415,4836,7193,8955,13938,15226,15863,16508,19937,21300,22349,27870,
#Partially deleted in new
chr19	5691833	5719804	chr19:5691833-5719804	0	-	5691833	5691833	8553170	16	375,165,218,166,141,117,509,179,139,221,84,130,62,120,89,101,	0,1464,1718,2553,2927,4220,4415,7193,8955,13938,15226,15863,16508,21300,22349,27870,
#Partially deleted in new
chr19	5691834	5720572	chr19:5691834-5720572	1	-	5692031	5713183	0	18	374,165,218,166,141,117,123,88,179,139,221,84,130,62,232,120,89,354,	0,1463,1717,2552,2926,4219,4414,4835,7192,8954,13937,15225,15862,16507,19936,21299,22348,28384,
#Partially deleted in new
chr19	5691834	5720146	chr19:5691834-5720146	1	-	5692031	5719790	789624	19	374,165,218,166,141,117,123,88,179,139,221,84,130,62,232,120,89,130,104,	0,1463,1717,2552,2926,4219,4414,4835,7192,8954,13937,15225,15862,16507,19936,21299,22348,27869,28208,
#Partially deleted in new
chr19	5691834	5719871	chr19:5691834-5719871	0	-	5711889	5719871	789624	18	374,165,218,166,141,117,123,88,179,139,221,84,130,62,300,120,89,168,	0,1463,1717,2552,2926,4219,4414,4835,7192,8954,13937,15225,15862,16507,19936,21299,22348,27869,
#Partially deleted in new
chr19	5691834	5720165	chr19:5691834-5720165	1	-	5692031	5720132	0	19	374,165,218,166,141,117,123,88,179,139,221,84,130,62,232,120,89,113,157,	0,1463,1717,2552,2926,4219,4414,4835,7192,8954,13937,15225,15862,16507,19936,21299,22348,27869,28174,
#Partially deleted in new
chr19	5691954	5719849	chr19:5691954-5719849	1	-	5692031	5719790	789624	18	254,165,218,166,141,117,123,88,179,139,221,84,130,62,184,120,89,146,	0,1343,1597,2432,2806,4099,4294,4715,7072,8834,13817,15105,15742,16387,19864,21179,22228,27749,
#Deleted in new
chr19	5691992	5694546	chr19:5691992-5694546	0	-	5691992	5694546	789624	4	250,165,218,160,	0,1305,1559,2394,
#Partially deleted in new
chr19	5696686	5707811	chr19:5696686-5707811	0	-	5696686	5707811	789624	5	71,179,139,221,115,	0,2340,4102,9085,11010,
#Partially deleted in new
chr19	5700884	5708032	chr19:5700884-5708032	0	-	5700884	5700884	8553170	4	43,221,84,336,	0,4887,6175,6812,
#Partially deleted in new
chr19	5700908	5720143	chr19:5700908-5720143	0	-	5700908	5720132	789624	4	19,176,6,440,	0,4863,11554,18795,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	5705910	5708958	chr19:5705910-5708958	0	-	5705910	5705910	8553170	4	82,84,130,617,	0,1149,1786,2431,
#Partially deleted in new
chr19	5707811	5720146	chr19:5707811-5720146	0	-	5711889	5720132	789624	4	15,62,180,214,	0,530,3959,12121,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	5714902	5720156	chr19:5714902-5720156	0	-	5714902	5714902	8553170	2	138,453,	0,4801,
#Partially deleted in new
chr19	5717354	5720163	chr19:5717354-5720163	0	-	5717354	5717354	8553170	2	262,460,	0,2349,
#Partially deleted in new
chr19	5720676	5778734	chr19:5720676-5778734	3	+	5720737	5778676	789624	22	132,55,77,73,115,68,114,84,151,96,83,177,114,90,59,79,53,75,129,178,155,359,	0,4131,6591,9195,13179,16461,18649,23750,25236,27483,28424,30970,33455,37166,38409,42538,45426,47491,50267,52111,55484,57699,
#Duplicated in new
chr19	5753510	5778734	chr19:5753510-5778734	0	+	5753510	5753510	8553170	11	177,114,90,59,79,53,75,129,178,155,359,	0,621,4332,5575,9704,12592,14657,17433,19277,22650,24865,
#Deleted in new
chr19	5782959	5784599	chr19:5782959-5784599	0	-	5784351	5784599	789624	1	1640,	0,
#Deleted in new
chr19	5782959	5784765	chr19:5782959-5784765	3	-	5782977	5784660	789624	3	1094,63,235,	0,1417,1571,
#Deleted in new
chr19	5784004	5785619	chr19:5784004-5785619	3	-	5784351	5785619	789624	3	435,129,17,	0,1378,1598,
#Deleted in new
chr19	5784831	5785755	chr19:5784831-5785755	0	-	5785156	5785755	789624	2	680,153,	0,771,
#Partially deleted in new
chr19	5785139	5791238	chr19:5785139-5791238	3	-	5785202	5791141	789624	13	136,129,189,76,97,111,66,117,153,42,513,289,195,	0,243,463,1327,1609,1921,2156,2449,2884,3217,4067,4907,5904,
#Partially deleted in new
chr19	5785139	5791206	chr19:5785139-5791206	1	-	5785202	5791141	789624	12	136,129,189,76,97,111,66,117,153,42,76,163,	0,243,463,1327,1609,1921,2156,2449,2884,3217,5120,5904,
#Partially deleted in new
chr19	5785139	5791210	chr19:5785139-5791210	0	-	5785139	5785139	8553170	12	136,129,189,76,423,66,117,153,42,510,293,167,	0,243,463,1327,1609,2156,2449,2884,3217,4067,4903,5904,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	5785455	5785999	chr19:5785455-5785999	0	-	5785455	5785455	8553170	2	56,397,	0,147,
#Partially deleted in new
chr19	5785455	5788176	chr19:5785455-5788176	0	-	5786473	5788176	789624	7	56,189,76,111,66,117,153,	0,147,1011,1605,1840,2133,2568,
#Partially deleted in new
chr19	5785455	5788034	chr19:5785455-5788034	0	-	5786805	5788034	789624	8	56,189,76,171,111,66,117,11,	0,147,1011,1293,1605,1840,2133,2568,
#Partially deleted in new
chr19	5785463	5786930	chr19:5785463-5786930	0	-	5785463	5785463	8553170	3	48,189,464,	0,139,1003,
#Deleted in new
chr19	5787246	5788170	chr19:5787246-5788170	0	-	5787246	5787246	8553170	3	115,117,147,	0,342,777,
#Deleted in new
chr19	5787555	5788122	chr19:5787555-5788122	0	-	5787555	5787555	8553170	2	150,99,	0,468,
#Partially deleted in new
chr19	5788023	5791225	chr19:5788023-5791225	0	-	5789250	5791141	789624	5	153,42,333,267,182,	0,333,1183,2045,3020,
#Deleted in new
chr19	5789133	5790265	chr19:5789133-5790265	0	-	5789705	5790265	789624	2	583,223,	0,909,
#Deleted in new
chr19	5789250	5790954	chr19:5789250-5790954	0	-	5790255	5790852	789624	3	466,293,136,	0,792,1568,
#Deleted in new
chr19	5789293	5791038	chr19:5789293-5791038	0	-	5789293	5789293	8553170	3	423,293,153,	0,749,1592,
#Deleted in new
chr19	5789936	5791210	chr19:5789936-5791210	0	-	5789936	5789936	8553170	2	399,167,	0,1107,
#Partially deleted in new
chr19	5823801	5828324	chr19:5823801-5828324	3	+	5824165	5828173	0	2	533,576,	0,3947,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	5830609	5839692	chr19:5830609-5839692	1	-	5831487	5832567	789624	3	1970,341,287,	0,8067,8796,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	5830625	5839731	chr19:5830625-5839731	3	-	5831487	5832567	789624	3	1954,128,1055,	0,4324,8051,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	5830625	5838760	chr19:5830625-5838760	1	-	5831487	5832567	789624	4	1954,45,128,84,	0,2235,4324,8051,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	5830773	5839717	chr19:5830773-5839717	1	-	5831487	5832567	789624	2	1806,1041,	0,7903,
#Deleted in new
chr19	5831377	5832567	chr19:5831377-5832567	1	-	5831377	5832567	789624	2	52,1043,	0,147,
#Partially deleted in new
chr19	5832156	5838825	chr19:5832156-5838825	0	-	5832156	5832567	789624	3	423,128,149,	0,2793,6520,
#Partially deleted in new
chr19	5832360	5835077	chr19:5832360-5835077	0	-	5832360	5832567	789624	4	219,45,180,238,	0,500,1946,2479,
#Partially deleted in new
chr19	5832367	5838790	chr19:5832367-5838790	0	-	5832367	5832567	789624	3	212,238,114,	0,2472,6309,
#Partially deleted in new
chr19	5832433	5838732	chr19:5832433-5838732	0	-	5832433	5832567	789624	4	146,128,200,56,	0,2516,5740,6243,
#Partially deleted in new
chr19	5832476	5838746	chr19:5832476-5838746	0	-	5832476	5832567	789624	4	103,128,226,70,	0,2473,5697,6200,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	5834771	5838730	chr19:5834771-5838730	0	-	5834771	5834771	8553170	2	306,54,	0,3905,
#Deleted in new
chr19	5837883	5839722	chr19:5837883-5839722	0	-	5837883	5837883	8553170	1	1839,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	5842887	5851471	chr19:5842887-5851471	1	-	5843753	5844839	789624	3	1964,541,82,	0,3538,8502,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	5842889	5851449	chr19:5842889-5851449	1	-	5843753	5844839	789624	2	1962,60,	0,8500,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	5842890	5851474	chr19:5842890-5851474	3	-	5843753	5844839	789624	3	1961,193,85,	0,3535,8499,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	5842890	5851471	chr19:5842890-5851471	1	-	5843753	5844839	789624	3	1961,139,82,	0,3535,8499,
#Partially deleted in new
chr19	5844518	5851449	chr19:5844518-5851449	0	-	5844518	5844839	789624	3	333,174,60,	0,1907,6871,
#Duplicated in new
chr19	5844539	5848905	chr19:5844539-5848905	0	-	5844539	5844839	789624	3	312,193,72,	0,1886,4294,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	5844706	5847034	chr19:5844706-5847034	0	-	5844706	5844839	789624	2	145,609,	0,1719,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	5847466	5858239	chr19:5847466-5858239	3	+	5847466	5847466	789624	4	302,170,92,624,	0,5037,7104,10149,
#Deleted in new
chr19	5865825	5867741	chr19:5865825-5867741	1	-	5866600	5867725	789624	1	1916,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	5865825	5870540	chr19:5865825-5870540	3	-	5866600	5867725	789624	2	1912,76,	0,4639,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	5866170	5903787	chr19:5866170-5903787	0	-	5870570	5903708	789624	5	1567,159,123,93,176,	0,4294,30282,30734,37441,
#Partially deleted in new
chr19	5867614	5903703	chr19:5867614-5903703	2	-	5867614	5903703	789624	4	123,123,93,92,	0,28838,29290,35997,
#Partially deleted in new
chr19	5867614	5903703	chr19:5867614-5903703	1	-	5867614	5903703	789624	4	123,198,93,92,	0,28838,29290,35997,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	5891275	5903786	chr19:5891275-5903786	3	-	5892916	5903708	0	4	2015,123,93,175,	0,5177,5629,12336,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	5894674	5903771	chr19:5894674-5903771	1	-	5896402	5903708	789624	3	1901,93,160,	0,2230,8937,
#Partially deleted in new
chr19	5894676	5903756	chr19:5894676-5903756	1	-	5894741	5903708	0	4	178,123,93,145,	0,1776,2228,8935,
#Partially deleted in new
chr19	5894676	5903754	chr19:5894676-5903754	0	-	5901443	5903708	789624	5	178,123,93,120,143,	0,1776,2228,6658,8935,
#Partially deleted in new
chr19	5894680	5896681	chr19:5894680-5896681	0	-	5894680	5894680	8553170	2	174,229,	0,1772,
#Partially deleted in new
chr19	5899894	5901461	chr19:5899894-5901461	0	+	5899894	5899894	8553170	2	115,185,	0,1382,
#Partially deleted in new
chr19	5899909	5901511	chr19:5899909-5901511	3	+	5899909	5899909	8553170	2	100,241,	0,1361,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	5902430	5904006	chr19:5902430-5904006	0	-	5902430	5902430	8553170	2	209,395,	0,1181,
#Partially deleted in new
chr19	5904840	5914707	chr19:5904840-5914707	3	+	5904890	5914236	789624	4	241,89,105,145,	0,9380,9544,9722,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	5904857	5910853	chr19:5904857-5910853	3	+	5904890	5909142	789624	2	224,2030,	0,3966,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	5911577	5913899	chr19:5911577-5913899	3	-	5911577	5911577	8553170	2	191,398,	0,1924,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	5911706	5915877	chr19:5911706-5915877	3	+	5914073	5915322	789624	5	2603,105,178,207,657,	0,2678,2856,3233,3514,
#Deleted in new
chr19	5914255	5914913	chr19:5914255-5914913	0	+	5914255	5914255	8553170	3	54,105,351,	0,129,307,
#Deleted in new
chr19	5914271	5915130	chr19:5914271-5915130	0	+	5914271	5914271	8553170	2	38,746,	0,113,
#Deleted in new
chr19	5914272	5915081	chr19:5914272-5915081	0	+	5914406	5915081	789624	3	217,178,142,	0,290,667,
#Partially deleted in new
chr19	5916138	5978140	chr19:5916138-5978140	3	-	5917609	5978082	0	17	1515,187,143,121,110,103,79,104,120,128,93,66,87,37,204,56,80,	0,1655,2357,5062,7055,7673,8688,9495,11829,15265,16313,17275,25482,25660,35254,41779,61922,
#Partially deleted in new
chr19	5916138	5978108	chr19:5916138-5978108	1	-	5917609	5978082	0	17	1515,187,143,121,110,103,79,104,120,113,93,66,87,37,204,56,48,	0,1655,2357,5062,7055,7673,8688,9495,11829,15280,16313,17275,25482,25660,35254,41779,61922,
#Partially deleted in new
chr19	5917315	5978085	chr19:5917315-5978085	0	-	5935816	5978082	789624	17	338,187,143,121,110,103,79,104,120,113,93,66,155,87,37,56,25,	0,478,1180,3885,5878,6496,7511,8318,10652,14103,15136,16098,18369,24305,24483,40602,60745,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	5917321	5934462	chr19:5917321-5934462	0	-	5917321	5917321	8553170	12	332,187,143,121,110,103,79,104,120,113,93,1049,	0,472,1174,3879,5872,6490,7505,8312,10646,14097,15130,16092,
#Partially deleted in new
chr19	5917322	5978093	chr19:5917322-5978093	1	-	5917609	5978082	789624	16	331,187,143,121,110,103,79,104,120,113,93,66,87,37,56,33,	0,471,1173,3878,5871,6489,7504,8311,10645,14096,15129,16091,24298,24476,40595,60738,
#Partially deleted in new
chr19	5917351	5978086	chr19:5917351-5978086	1	-	5917609	5978082	0	16	302,187,143,121,110,103,79,104,120,128,93,66,87,37,56,26,	0,442,1144,3849,5842,6460,7475,8282,10616,14052,15100,16062,24269,24447,40566,60709,
#Partially deleted in new
chr19	5917639	5978142	chr19:5917639-5978142	0	-	5917639	5921321	789624	5	14,187,143,121,82,	0,154,856,3561,60421,
#Partially deleted in new
chr19	5918402	5923874	chr19:5918402-5923874	0	-	5918402	5918402	8553170	4	236,121,110,63,	0,2798,4791,5409,
#Partially deleted in new
chr19	5920891	5933318	chr19:5920891-5933318	0	-	5920891	5920891	8553170	7	430,110,103,911,120,128,867,	0,2302,2920,3935,7076,10512,11560,
#Partially deleted in new
chr19	5923193	5978079	chr19:5923193-5978079	0	-	5923193	5925707	789624	10	110,103,79,104,120,93,66,87,37,19,	0,618,1633,2440,4774,9258,10220,18427,18605,54867,
#Partially deleted in new
chr19	5923214	5925765	chr19:5923214-5925765	0	-	5923214	5923214	8553170	4	89,103,79,132,	0,597,1612,2419,
#Partially deleted in new
chr19	5924826	5978096	chr19:5924826-5978096	0	-	5924826	5925707	789624	10	79,104,120,113,93,66,87,37,51,36,	0,807,3141,6592,7625,8587,16794,16972,33091,53234,
#Partially deleted in new
chr19	5925651	5978140	chr19:5925651-5978140	0	-	5925651	5978082	789624	6	86,120,128,93,66,80,	0,2316,5752,6800,7762,52409,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	5925663	5928444	chr19:5925663-5928444	0	-	5925663	5925663	8553170	2	74,477,	0,2304,
#Partially deleted in new
chr19	5928015	5978097	chr19:5928015-5978097	0	-	5928015	5928015	8553170	8	72,128,93,66,87,37,51,37,	0,3388,4436,5398,13605,13783,29902,50045,
#Partially deleted in new
chr19	5928061	5978140	chr19:5928061-5978140	0	-	5928061	5928061	8553170	8	26,128,93,66,87,37,18,80,	0,3342,4390,5352,13559,13737,29856,49999,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	5928279	5978113	chr19:5928279-5978113	0	-	5928279	5928279	8553170	8	34,128,93,66,87,37,56,53,	0,3124,4172,5134,13341,13519,29638,49781,
#Partially deleted in new
chr19	5931450	5978093	chr19:5931450-5978093	0	-	5931450	5931450	8553170	7	81,93,66,127,87,37,33,	0,1001,1963,2352,10170,10348,46610,
#Partially deleted in new
chr19	5931495	5978093	chr19:5931495-5978093	0	-	5941644	5974427	789624	8	36,93,66,87,37,56,82,33,	0,956,1918,10125,10303,26422,42854,46565,
#Partially deleted in new
chr19	5931500	5978140	chr19:5931500-5978140	0	-	5941644	5978082	789624	7	31,93,66,87,37,67,80,	0,951,1913,10120,10298,26406,46560,
#Partially deleted in new
chr19	5931512	5978093	chr19:5931512-5978093	0	-	5933636	5978082	789624	7	19,93,243,87,37,56,33,	0,939,1901,10108,10286,26405,46548,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	5932451	5978093	chr19:5932451-5978093	0	-	5976479	5978082	789624	7	93,66,87,37,56,194,33,	0,962,9169,9347,25466,43929,45609,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	5932451	5978097	chr19:5932451-5978097	0	-	5932451	5932451	8553170	7	93,66,87,37,56,199,37,	0,962,9169,9347,25466,43929,45609,
#Partially deleted in new
chr19	5933411	5978088	chr19:5933411-5978088	0	-	5951484	5974427	789624	7	68,87,37,204,56,82,28,	0,8209,8387,17981,24506,40938,44649,
#Partially deleted in new
chr19	5933416	5978085	chr19:5933416-5978085	0	-	5933416	5933416	8553170	6	63,87,37,159,204,25,	0,8204,8382,17300,17976,44644,
#Partially deleted in new
chr19	5933419	5978093	chr19:5933419-5978093	0	-	5933419	5933419	8553170	6	60,87,37,204,51,33,	0,8201,8379,17973,24498,44641,
#Partially deleted in new
chr19	5933473	5978093	chr19:5933473-5978093	0	-	5950827	5978082	789624	7	6,87,37,156,204,56,33,	0,8147,8325,17243,17919,24444,44587,
#Partially deleted in new
chr19	5941620	5978088	chr19:5941620-5978088	0	-	5941620	5941620	8553170	5	87,37,156,204,28,	0,178,9096,9772,36440,
#Partially deleted in new
chr19	5941670	5978093	chr19:5941670-5978093	0	-	5941670	5965817	789624	6	37,37,204,56,190,33,	0,128,9722,16247,24062,36390,
#Partially deleted in new
chr19	5950576	5978093	chr19:5950576-5978093	0	-	5950576	5950576	8553170	4	296,204,56,33,	0,816,7341,27484,
#Partially deleted in new
chr19	5978402	6020363	chr19:5978402-6020363	3	+	5978402	5978402	789624	4	112,105,108,314,	0,33717,41433,41647,
#Partially deleted in new
chr19	5993163	6110534	chr19:5993163-6110534	3	-	5994834	6047496	789624	18	1787,43,154,209,150,98,155,113,119,116,120,182,75,262,80,90,98,142,	0,2437,3896,8651,9557,11037,13848,14526,14942,16972,19822,22926,32999,46816,48880,51029,54243,117229,
#Partially deleted in new
chr19	5993516	6049232	chr19:5993516-6049232	1	-	5994834	6047496	789624	18	1434,43,154,209,150,98,155,113,119,116,120,182,75,262,80,90,98,97,	0,2084,3543,8298,9204,10684,13495,14173,14589,16619,19469,22573,32646,46463,48527,50676,53890,55619,
#Partially deleted in new
chr19	5994501	6110532	chr19:5994501-6110532	1	-	5994834	6047496	789624	17	449,43,154,209,150,98,155,113,119,116,120,182,262,80,90,98,140,	0,1099,2558,7313,8219,9699,12510,13188,13604,15634,18484,21588,45478,47542,49691,52905,115891,
#Deleted in new
chr19	5994815	5997373	chr19:5994815-5997373	0	-	5994815	5994815	8553170	3	135,43,314,	0,785,2244,
#Partially deleted in new
chr19	6002721	6008226	chr19:6002721-6008226	0	-	6002721	6008226	789624	4	149,155,113,121,	0,4290,4968,5384,
#Partially deleted in new
chr19	6007774	6110512	chr19:6007774-6110512	0	-	6007774	6016121	789624	5	28,119,116,182,120,	0,331,2361,8315,102618,
#Partially deleted in new
chr19	6007865	6026699	chr19:6007865-6026699	0	-	6007865	6007865	8553170	5	359,116,120,182,537,	0,2270,5120,8224,18297,
#Partially deleted in new
chr19	6008188	6023205	chr19:6008188-6023205	0	-	6008188	6008188	8553170	5	36,116,120,182,110,	0,1947,4797,7901,14907,
#Partially deleted in new
chr19	6010181	6110482	chr19:6010181-6110482	0	-	6010181	6026231	789624	5	70,120,182,75,90,	0,2804,5908,15981,100211,
#Partially deleted in new
chr19	6013038	6110480	chr19:6013038-6110480	0	-	6013038	6016121	789624	3	67,182,88,	0,3051,97354,
#Partially deleted in new
chr19	6026162	6110446	chr19:6026162-6110446	0	-	6026162	6047496	789624	5	75,262,80,98,54,	0,13817,15881,21244,84230,
#Partially deleted in new
chr19	6026195	6110473	chr19:6026195-6110473	0	-	6026195	6026195	8553170	5	42,262,90,98,81,	0,13784,17997,21211,84197,
#Partially deleted in new
chr19	6027163	6110478	chr19:6027163-6110478	0	-	6027163	6027163	8553170	6	171,262,80,90,98,86,	0,12816,14880,17029,20243,83229,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	6040034	6113761	chr19:6040034-6113761	0	-	6040034	6044237	789624	4	207,80,90,200,	0,2009,4158,73527,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	6040073	6199529	chr19:6040073-6199529	0	-	6040073	6047496	789624	6	168,80,90,98,99,54,	0,1970,4119,7333,108157,159402,
#Partially deleted in new
chr19	6040085	6110601	chr19:6040085-6110601	0	-	6040085	6044237	789624	4	156,80,90,209,	0,1958,4107,70307,
#Partially deleted in new
chr19	6040185	6057283	chr19:6040185-6057283	0	-	6040185	6047496	789624	5	56,80,90,98,122,	0,1858,4007,7221,16976,
#Partially deleted in new
chr19	6040202	6110476	chr19:6040202-6110476	0	-	6040202	6047496	789624	6	39,80,90,98,143,84,	0,1841,3990,7204,31802,70190,
#Partially deleted in new
chr19	6067952	6077119	chr19:6067952-6077119	3	+	6067952	6067952	8553170	2	467,100,	0,9067,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	6072822	6073527	chr19:6072822-6073527	7	+	6072822	6072822	16724991	2	159,259,	0,446,
#Partially deleted in new
chr19	6078100	6110468	chr19:6078100-6110468	0	-	6078100	6078100	8553170	2	234,76,	0,32292,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	6109321	6125797	chr19:6109321-6125797	3	+	6109321	6109321	8553170	2	61,264,	0,16212,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	6135246	6151797	chr19:6135246-6151797	0	+	6141543	6151797	789624	5	114,86,98,230,91,	0,577,6266,12199,16460,
#Partially deleted in new
chr19	6135634	6193094	chr19:6135634-6193094	1	+	6147528	6190657	789624	15	275,98,220,89,121,81,150,168,182,234,218,140,247,109,427,	0,5878,11821,16072,20796,25580,30231,41594,47116,47404,49801,51648,51964,54949,57033,
#Partially deleted in new
chr19	6135639	6193089	chr19:6135639-6193089	1	+	6161268	6190657	789624	15	24,86,98,230,89,81,150,168,182,234,218,140,247,109,422,	0,184,5873,11806,16067,25575,30226,41589,47111,47399,49796,51643,51959,54944,57028,
#Partially deleted in new
chr19	6135646	6156471	chr19:6135646-6156471	0	+	6141543	6156471	789624	6	27,86,98,230,89,41,	0,177,5866,11799,16060,20784,
#Partially deleted in new
chr19	6135668	6193094	chr19:6135668-6193094	3	+	6141543	6190657	789624	15	196,98,230,89,121,81,150,168,182,234,218,140,247,109,427,	0,5844,11777,16038,20762,25546,30197,41560,47082,47370,49767,51614,51930,54915,56999,
#Partially deleted in new
chr19	6135673	6193094	chr19:6135673-6193094	1	+	6141543	6190657	789624	15	245,98,230,89,121,81,150,168,182,234,218,140,247,109,427,	0,5839,11772,16033,20757,25541,30192,41555,47077,47365,49762,51609,51925,54910,56994,
#Partially deleted in new
chr19	6135680	6166019	chr19:6135680-6166019	0	+	6141543	6161233	789624	6	229,98,230,89,81,154,	0,5832,11765,16026,25534,30185,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	6135682	6147606	chr19:6135682-6147606	0	+	6141543	6147606	789624	4	236,104,98,161,	0,1629,5830,11763,
#Partially deleted in new
chr19	6135700	6165992	chr19:6135700-6165992	0	+	6141543	6161233	789624	6	164,98,230,89,81,127,	0,5812,11745,16006,25514,30165,
#Partially deleted in new
chr19	6156449	6177361	chr19:6156449-6177361	0	+	6156449	6175311	789624	5	102,81,150,139,133,	0,4765,9416,18841,20779,
#Partially deleted in new
chr19	6160559	6177368	chr19:6160559-6177368	0	+	6160559	6160559	8553170	4	199,81,150,140,	0,655,5306,16669,
#Partially deleted in new
chr19	6161479	6193091	chr19:6161479-6193091	0	+	6161479	6161479	8553170	10	107,150,168,182,234,218,140,247,109,424,	0,4386,15749,21271,21559,23956,25803,26119,29104,31188,
#Partially deleted in new
chr19	6175872	6199563	chr19:6175872-6199563	0	-	6175872	6175872	8553170	2	571,88,	0,23603,
#Deleted in new
chr19	6176255	6176442	chr19:6176255-6176442	7	-	6176255	6176255	16724991	1	187,	0,
#Partially deleted in new
chr19	6176274	6199524	chr19:6176274-6199524	0	-	6176274	6176274	8553170	2	169,45,	0,23205,
#Partially deleted in new
chr19	6187330	6193091	chr19:6187330-6193091	0	+	6187330	6187699	789624	3	92,167,424,	0,348,5337,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	6189727	6199529	chr19:6189727-6199529	0	-	6189727	6189727	8553170	2	2326,50,	0,9752,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	6191325	6199507	chr19:6191325-6199507	0	-	6191325	6191325	8553170	3	269,165,28,	0,539,8154,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	6191569	6199572	chr19:6191569-6199572	0	-	6191569	6191569	8553170	2	460,97,	0,7906,
#Partially deleted in new
chr19	6199404	6205121	chr19:6199404-6205121	7	+	6199404	6199404	16724991	2	123,93,	0,5624,
#Partially deleted in new
chr19	6210378	6279948	chr19:6210378-6279948	3	-	6213041	6279784	0	12	2792,72,72,100,109,88,564,126,144,83,181,176,	0,2958,3347,3560,6026,7575,11742,16598,20191,51849,60200,69394,
#Deleted in new
chr19	6210688	6211476	chr19:6210688-6211476	0	-	6210688	6210688	8553170	2	377,179,	0,609,
#Deleted in new
chr19	6213119	6216968	chr19:6213119-6216968	0	-	6213119	6213119	8553170	6	51,72,72,100,109,233,	0,217,606,819,3285,3616,
#Deleted in new
chr19	6259156	6259799	chr19:6259156-6259799	3	+	6259156	6259156	8553170	2	122,401,	0,242,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	6263067	6263469	chr19:6263067-6263469	3	-	6263067	6263067	8553170	1	402,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	6306141	6333629	chr19:6306141-6333629	3	-	6306713	6333551	789624	6	741,138,138,142,115,171,	0,1011,3555,6007,6243,27317,
#Partially deleted in new
chr19	6343760	6362149	chr19:6343760-6362149	3	-	6343760	6343760	8553170	4	201,112,211,35,	0,9595,16402,18354,
#Partially deleted in new
chr19	6361451	6368910	chr19:6361451-6368910	3	+	6361574	6368710	0	6	321,72,97,188,106,373,	0,417,994,3000,4806,7086,
#Partially deleted in new
chr19	6361564	6368707	chr19:6361564-6368707	0	+	6361564	6361564	8553170	5	208,674,188,106,170,	0,304,2887,4693,6973,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	6361673	6365190	chr19:6361673-6365190	0	+	6361673	6361673	8553170	4	99,72,97,739,	0,195,772,2778,
#Partially deleted in new
chr19	6361746	6368545	chr19:6361746-6368545	0	+	6361746	6366322	789624	6	26,72,80,188,106,8,	0,122,699,2705,4511,6791,
#Partially deleted in new
chr19	6361803	6368754	chr19:6361803-6368754	1	+	6361931	6368710	789624	5	137,97,188,106,217,	0,642,2648,4454,6734,
#Partially deleted in new
chr19	6361887	6368902	chr19:6361887-6368902	0	+	6361887	6366322	789624	4	53,97,106,365,	0,558,4370,6650,
#Partially deleted in new
chr19	6364567	6368906	chr19:6364567-6368906	0	+	6364567	6368567	789624	2	72,369,	0,3970,
#Deleted in new
chr19	6372432	6375251	chr19:6372432-6375251	3	+	6372820	6374973	0	4	592,174,125,441,	0,1770,2032,2378,
#Deleted in new
chr19	6373470	6375027	chr19:6373470-6375027	1	+	6374512	6374973	789624	4	87,174,125,217,	0,732,994,1340,
#Deleted in new
chr19	6373703	6375031	chr19:6373703-6375031	1	+	6373718	6374973	789624	4	36,174,125,221,	0,499,761,1107,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	6375147	6379058	chr19:6375147-6379058	1	-	6375354	6375849	789624	1	3911,	0,
#Deleted in new
chr19	6375293	6375849	chr19:6375293-6375849	3	-	6375293	6375849	789624	2	323,148,	0,408,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	6379568	6393460	chr19:6379568-6393460	3	-	6380280	6392995	0	13	917,118,139,74,120,62,154,185,171,194,73,47,477,	0,1004,1335,1553,1790,1985,2128,3742,7820,9875,12333,13288,13415,
#Partially deleted in new
chr19	6379877	6391952	chr19:6379877-6391952	0	-	6380280	6391952	789624	10	608,118,139,74,120,62,154,185,194,51,	0,695,1026,1244,1481,1676,1819,3433,9566,12024,
#Deleted in new
chr19	6380189	6381820	chr19:6380189-6381820	0	-	6380189	6380189	8553170	6	286,118,292,120,62,124,	0,383,714,1169,1364,1507,
#Deleted in new
chr19	6380390	6381775	chr19:6380390-6381775	0	-	6380390	6380390	8553170	6	95,118,139,74,257,79,	0,182,513,731,968,1306,
#Partially deleted in new
chr19	6381412	6393205	chr19:6381412-6393205	0	-	6381412	6392887	789624	10	66,62,154,185,171,194,73,208,47,222,	0,141,284,1898,5976,8031,10489,10790,11444,11571,
#Partially deleted in new
chr19	6387504	6393981	chr19:6387504-6393981	0	-	6387504	6392995	789624	6	55,194,73,47,158,41,	0,1939,4397,5352,5479,6436,
#Deleted in new
chr19	6389637	6389703	chr19:6389637-6389703	3	-	6389637	6389637	5263520	1	66,	0,
#Deleted in new
chr19	6392920	6392983	chr19:6392920-6392983	3	-	6392920	6392920	5263520	1	63,	0,
#Partially deleted in new
chr19	6393793	6412338	chr19:6393793-6412338	7	+	6393793	6393793	16724991	5	61,189,114,192,69,	0,2565,6314,17927,18476,
#Partially deleted in new
chr19	6393808	6411777	chr19:6393808-6411777	4	+	6393808	6393808	16724991	2	46,57,	0,17912,
#Partially deleted in new
chr19	6396344	6412404	chr19:6396344-6412404	5	+	6396344	6396344	16724991	3	203,192,135,	0,15376,15925,
#Partially deleted in new
chr19	6413347	6424794	chr19:6413347-6424794	3	-	6414111	6424701	0	20	773,161,78,201,89,110,161,145,101,103,99,99,175,58,72,50,40,39,97,342,	0,1793,2032,2186,2460,2950,3142,3390,3639,4391,4633,5135,5354,5855,6725,7074,7930,8302,8992,11105,
#Deleted in new
chr19	6413410	6415695	chr19:6413410-6415695	0	-	6413445	6415695	789624	3	139,78,162,	0,1969,2123,
#Partially deleted in new
chr19	6413429	6424775	chr19:6413429-6424775	1	-	6413445	6424701	789624	21	109,30,47,78,201,89,110,161,145,101,103,99,99,175,58,72,50,40,39,97,323,	0,113,1825,1950,2104,2378,2868,3060,3308,3557,4309,4551,5053,5272,5773,6643,6992,7848,8220,8910,11023,
#Deleted in new
chr19	6413640	6415448	chr19:6413640-6415448	0	-	6413729	6415448	789624	3	98,161,69,	0,1500,1739,
#Deleted in new
chr19	6413964	6416812	chr19:6413964-6416812	0	-	6414111	6416812	789624	8	156,161,78,126,89,110,161,75,	0,1176,1415,1644,1843,2333,2525,2773,
#Deleted in new
chr19	6414456	6415684	chr19:6414456-6415684	0	-	6415023	6415684	789624	3	845,78,76,	0,923,1152,
#Deleted in new
chr19	6414702	6415707	chr19:6414702-6415707	0	-	6415023	6415707	789624	3	599,78,174,	0,677,831,
#Deleted in new
chr19	6415215	6415721	chr19:6415215-6415721	0	-	6415215	6415215	8553170	2	86,342,	0,164,
#Deleted in new
chr19	6416409	6416511	chr19:6416409-6416511	3	-	6416409	6416409	5263520	1	102,	0,
#Deleted in new
chr19	6417738	6421698	chr19:6417738-6421698	0	-	6417738	6417738	8553170	9	103,99,99,175,58,72,50,40,49,	0,242,744,963,1464,2334,2683,3539,3911,
#Partially deleted in new
chr19	6417738	6424529	chr19:6417738-6424529	0	-	6417738	6424529	789624	10	103,99,99,175,58,50,40,39,97,77,	0,242,744,963,1464,2683,3539,3911,4601,6714,
#Partially deleted in new
chr19	6418019	6424327	chr19:6418019-6424327	0	-	6418019	6420464	789624	10	60,99,175,58,72,50,40,39,97,111,	0,463,682,1183,2053,2402,3258,3630,4320,6197,
#Partially deleted in new
chr19	6418700	6424277	chr19:6418700-6424277	0	-	6418700	6420464	789624	8	176,58,72,50,40,39,97,140,	0,502,1372,1721,2577,2949,3639,5437,
#Deleted in new
chr19	6421000	6422357	chr19:6421000-6422357	0	-	6421000	6421000	8553170	2	688,18,	0,1339,
#Partially deleted in new
chr19	6426036	6433779	chr19:6426036-6433779	0	-	6426388	6433693	789624	8	119,260,148,168,108,153,156,293,	0,265,1066,1297,3687,3972,6012,7450,
#Partially deleted in new
chr19	6426038	6433762	chr19:6426038-6433762	3	-	6426388	6433693	789624	7	523,148,168,108,153,156,276,	0,1064,1295,3685,3970,6010,7448,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	6436078	6454009	chr19:6436078-6454009	0	-	6436417	6454009	789624	4	386,151,168,29,	0,8072,16233,17902,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	6436080	6454670	chr19:6436080-6454670	0	-	6436319	6454670	789624	5	384,88,151,153,112,	0,2366,8070,18242,18478,
#Partially deleted in new
chr19	6440063	6459735	chr19:6440063-6459735	3	-	6441974	6459628	789624	10	2096,151,168,108,153,159,112,88,127,263,	0,4087,12248,13917,14259,14495,16356,17439,18134,19409,
#Partially deleted in new
chr19	6441341	6454405	chr19:6441341-6454405	0	-	6441341	6454405	789624	6	143,181,151,168,108,83,	0,637,2809,10970,12639,12981,
#Partially deleted in new
chr19	6441473	6454670	chr19:6441473-6454670	0	-	6441974	6454670	789624	5	686,151,108,153,112,	0,2677,12507,12849,13085,
#Partially deleted in new
chr19	6441929	6452601	chr19:6441929-6452601	0	-	6441929	6441929	8553170	3	230,151,290,	0,2221,10382,
#Partially deleted in new
chr19	6443561	6459735	chr19:6443561-6459735	1	-	6443561	6459628	789624	10	95,151,168,108,153,159,112,88,127,263,	0,589,8750,10419,10761,10997,12858,13941,14636,15911,
#Partially deleted in new
chr19	6456302	6459770	chr19:6456302-6459770	0	-	6456302	6456302	8553170	4	229,88,127,298,	0,1200,1895,3170,
#Partially deleted in new
chr19	6456419	6465203	chr19:6456419-6465203	0	-	6456419	6458228	789624	5	112,88,127,107,123,	0,1083,1778,4325,8661,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	6463776	6467221	chr19:6463776-6467221	1	+	6464701	6466672	0	4	437,176,74,756,	0,831,1768,2689,
#Partially deleted in new
chr19	6464278	6467221	chr19:6464278-6467221	3	+	6464701	6466672	0	4	72,176,74,756,	0,329,1266,2187,
#Partially deleted in new
chr19	6464282	6467221	chr19:6464282-6467221	1	+	6464701	6467022	0	5	68,176,74,144,271,	0,325,1262,2183,2668,
#Partially deleted in new
chr19	6464530	6466769	chr19:6464530-6466769	1	+	6464701	6466672	0	3	253,74,304,	0,1014,1935,
#Partially deleted in new
chr19	6467206	6481808	chr19:6467206-6481808	3	-	6467503	6481695	789624	23	912,208,68,108,45,72,41,91,105,126,102,46,101,111,54,66,81,70,120,50,44,65,130,	0,1027,1371,1639,2389,3088,4058,4199,5682,8067,8277,8499,8630,9650,9867,10011,10171,11576,11730,12462,12652,12780,14472,
#Partially deleted in new
chr19	6467206	6476246	chr19:6467206-6476246	0	-	6467206	6467206	8553170	11	912,208,68,108,45,72,232,105,126,160,410,	0,1027,1371,1639,2389,3088,4058,5682,8067,8277,8630,
#Partially deleted in new
chr19	6467207	6476215	chr19:6467207-6476215	0	-	6467207	6467207	8553170	12	911,208,68,108,45,72,41,91,105,126,268,379,	0,1026,1370,1638,2388,3087,4057,4198,5681,8066,8276,8629,
#Partially deleted in new
chr19	6467209	6480289	chr19:6467209-6480289	0	-	6475642	6479712	789624	21	909,208,68,108,45,72,41,91,105,126,160,101,111,54,66,81,70,120,50,44,303,	0,1024,1368,1636,2386,3085,4055,4196,5679,8064,8274,8627,9647,9864,10008,10168,11573,11727,12459,12649,12777,
#Partially deleted in new
chr19	6467497	6481787	chr19:6467497-6481787	1	-	6467503	6479712	789624	21	621,208,68,108,45,72,41,91,105,126,102,46,101,111,54,66,81,70,120,50,109,	0,736,1080,1348,2098,2797,3767,3908,5391,7776,7986,8208,8339,9359,9576,9720,9880,11285,11439,12171,14181,
#Partially deleted in new
chr19	6467949	6469651	chr19:6467949-6469651	0	-	6467949	6467949	8553170	3	696,108,56,	0,896,1646,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	6469464	6470152	chr19:6469464-6470152	3	+	6469464	6469464	8553170	1	688,	0,
#Partially deleted in new
chr19	6476027	6478800	chr19:6476027-6478800	0	-	6476027	6476027	8553170	5	48,271,66,81,18,	0,829,1190,1350,2755,
#Partially deleted in new
chr19	6476493	6481774	chr19:6476493-6481774	0	-	6476493	6476493	8553170	10	472,54,66,81,70,120,50,44,4,96,	0,580,724,884,2289,2443,3175,3365,3493,5185,
#Partially deleted in new
chr19	6476850	6477588	chr19:6476850-6477588	0	-	6476850	6476850	8553170	3	117,54,371,	0,223,367,
#Partially deleted in new
chr19	6477085	6481787	chr19:6477085-6481787	0	-	6477085	6479712	789624	8	42,66,81,70,120,50,44,109,	0,132,292,1697,1851,2583,2773,4593,
#Partially deleted in new
chr19	6477092	6481798	chr19:6477092-6481798	0	-	6478814	6481695	789624	9	35,66,81,70,120,50,44,4,120,	0,125,285,1690,1844,2576,2766,2894,4586,
#Partially deleted in new
chr19	6477111	6481798	chr19:6477111-6481798	0	-	6477111	6477111	8553170	8	16,61,81,70,135,50,44,120,	0,106,266,1671,1825,2557,2747,4567,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	6477217	6482557	chr19:6477217-6482557	0	-	6477217	6479712	789624	8	66,81,70,120,50,44,65,75,	0,160,1565,1719,2451,2641,2769,5265,
#Partially deleted in new
chr19	6477427	6481753	chr19:6477427-6481753	0	-	6477427	6479712	789624	7	31,70,120,50,44,65,104,	0,1355,1509,2241,2431,2559,4222,
#Partially deleted in new
chr19	6494318	6502584	chr19:6494318-6502584	3	-	6495163	6502212	789624	4	1903,111,109,429,	0,6968,7196,7837,
#Deleted in new
chr19	6494319	6495025	chr19:6494319-6495025	3	+	6494319	6494319	8553170	2	230,290,	0,416,
#Deleted in new
chr19	6494319	6494805	chr19:6494319-6494805	3	+	6494319	6494319	8553170	2	194,102,	0,384,
#Partially deleted in new
chr19	6495721	6502309	chr19:6495721-6502309	0	-	6495721	6502212	789624	3	306,102,154,	0,5800,6434,
#Partially deleted in new
chr19	6495806	6502309	chr19:6495806-6502309	0	-	6495806	6502212	789624	3	323,102,154,	0,5715,6349,
#Partially deleted in new
chr19	6495807	6502309	chr19:6495807-6502309	0	-	6495807	6502212	789624	3	367,9,154,	0,5807,6348,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	6495904	6502309	chr19:6495904-6502309	0	-	6501233	6502212	789624	4	317,470,109,154,	0,5023,5610,6251,
#Partially deleted in new
chr19	6495958	6502338	chr19:6495958-6502338	1	-	6496140	6502212	789624	4	263,111,66,150,	0,5328,5556,6230,
#Partially deleted in new
chr19	6496015	6502337	chr19:6496015-6502337	1	-	6496140	6502212	789624	4	206,111,66,182,	0,5271,5499,6140,
#Partially deleted in new
chr19	6496060	6501787	chr19:6496060-6501787	0	-	6496060	6501347	789624	3	161,111,273,	0,5226,5454,
#Partially deleted in new
chr19	6496130	6502844	chr19:6496130-6502844	0	-	6496130	6502711	789624	5	91,111,109,159,166,	0,5156,5384,6025,6548,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	6496169	6502309	chr19:6496169-6502309	0	-	6500707	6502212	789624	5	52,127,111,109,154,	0,4446,5117,5345,5986,
#Partially deleted in new
chr19	6496175	6502848	chr19:6496175-6502848	0	-	6496175	6502212	789624	5	46,111,109,107,170,	0,5111,5339,5980,6503,
#Partially deleted in new
chr19	6496178	6502803	chr19:6496178-6502803	0	-	6496178	6502711	789624	5	43,111,109,177,125,	0,5108,5336,5977,6500,
#Partially deleted in new
chr19	6530998	6535928	chr19:6530998-6535928	3	+	6531036	6535066	0	3	305,31,1329,	0,1787,3601,
#Partially deleted in new
chr19	6552357	6554494	chr19:6552357-6554494	7	-	6552357	6552357	16724991	3	91,205,244,	0,1395,1893,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	6562122	6563848	chr19:6562122-6563848	7	-	6562122	6562122	16724991	3	115,184,418,	0,474,1308,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	6572955	6573057	chr19:6572955-6573057	3	-	6572955	6572955	8553170	1	102,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	6583182	6591139	chr19:6583182-6591139	1	-	6583299	6591002	789624	4	296,252,34,299,	0,2971,6920,7658,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	6585838	6591152	chr19:6585838-6591152	3	-	6586019	6591002	789624	3	567,34,312,	0,4264,5002,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	6590102	6604103	chr19:6590102-6604103	0	-	6590102	6591002	789624	4	34,215,160,163,	0,738,2313,13838,
#Partially deleted in new
chr19	6593328	6594055	chr19:6593328-6594055	7	+	6593328	6593328	16724991	1	727,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	6661252	6670117	chr19:6661252-6670117	1	-	6664925	6670069	0	4	4098,42,37,159,	0,5860,6160,8706,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	6664554	6670588	chr19:6664554-6670588	3	-	6664925	6670069	0	5	796,42,37,308,293,	0,2558,2858,5296,5741,
#Partially deleted in new
chr19	6677703	6720682	chr19:6677703-6720682	3	-	6677881	6720589	0	41	320,136,84,84,90,106,90,88,52,91,60,159,164,157,99,160,76,204,87,67,213,143,86,109,198,72,130,159,207,210,150,116,127,103,91,83,95,71,166,193,167,	0,448,668,1421,1703,2454,4237,4438,6684,6856,7071,7284,8420,9042,12925,15220,15708,16727,18675,18889,19640,19948,24423,24767,29372,29762,30096,31980,32935,33283,34553,34804,35485,35703,36288,36462,36648,40390,40543,41507,42812,
#Partially deleted in new
chr19	6677834	6678330	chr19:6677834-6678330	0	-	6677834	6677834	8553170	2	189,179,	0,317,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	6677840	6683360	chr19:6677840-6683360	0	-	6677840	6677840	8553170	8	183,136,84,84,90,106,90,1219,	0,311,531,1284,1566,2317,4100,4301,
#Partially deleted in new
chr19	6677863	6679201	chr19:6677863-6679201	0	-	6678147	6679201	789624	3	424,84,77,	0,508,1261,
#Partially deleted in new
chr19	6677866	6680151	chr19:6677866-6680151	0	-	6677866	6677866	8553170	6	157,136,84,84,115,51,	0,285,505,1258,1515,2234,
#Partially deleted in new
chr19	6677896	6690712	chr19:6677896-6690712	0	-	6677896	6690712	789624	3	62,157,84,	0,8849,12732,
#Partially deleted in new
chr19	6680158	6685038	chr19:6680158-6685038	0	-	6680158	6685038	789624	7	105,90,88,91,91,60,51,	0,1782,1983,4229,4401,4616,4829,
#Deleted in new
chr19	6684232	6684632	chr19:6684232-6684632	0	-	6684232	6684232	8553170	2	207,73,	0,327,
#Deleted in new
chr19	6684559	6686376	chr19:6684559-6686376	0	-	6684559	6684559	8553170	4	91,60,159,253,	0,215,428,1564,
#Partially deleted in new
chr19	6686288	6693083	chr19:6686288-6693083	0	-	6686288	6686288	8553170	3	614,99,160,	0,4340,6635,
#Partially deleted in new
chr19	6696613	6697715	chr19:6696613-6697715	0	-	6696613	6696613	8553170	2	46,372,	0,730,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	6697661	6702872	chr19:6697661-6702872	0	-	6697661	6697661	8553170	3	133,86,402,	0,4465,4809,
#Deleted in new
chr19	6709755	6710957	chr19:6709755-6710957	0	-	6709755	6709755	8553170	2	87,319,	0,883,
#Deleted in new
chr19	6712279	6713315	chr19:6712279-6713315	0	-	6712279	6712279	8553170	3	127,95,127,	0,228,909,
#Deleted in new
chr19	6712306	6713788	chr19:6712306-6713788	0	-	6712306	6712306	8553170	5	100,116,127,103,23,	0,201,882,1100,1459,
#Deleted in new
chr19	6712315	6714351	chr19:6712315-6714351	0	-	6712315	6712315	8553170	6	91,116,127,103,91,186,	0,192,873,1091,1676,1850,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	6716385	6717742	chr19:6716385-6717742	3	-	6716385	6716385	8553170	1	1357,	0,
#Deleted in new
chr19	6718033	6720650	chr19:6718033-6720650	0	-	6718033	6718033	8553170	4	131,166,193,135,	0,213,1177,2482,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	6718246	6730562	chr19:6718246-6730562	0	-	6718246	6719354	789624	4	166,193,323,26,	0,964,5194,12290,
#Partially deleted in new
chr19	6729913	6737603	chr19:6729913-6737603	3	-	6730311	6737576	789624	18	471,125,84,50,44,131,118,74,76,134,105,69,50,125,83,51,120,147,	0,1073,1285,1559,1977,2111,2349,2562,3073,3254,3656,3931,4091,4269,5708,5994,6678,7543,
#Deleted in new
chr19	6730054	6732054	chr19:6730054-6732054	0	-	6730054	6730054	8553170	5	330,125,84,50,30,	0,932,1144,1418,1970,
#Deleted in new
chr19	6730054	6732056	chr19:6730054-6732056	0	-	6730073	6732056	789624	6	188,125,84,50,44,32,	0,932,1144,1418,1836,1970,
#Deleted in new
chr19	6730055	6732068	chr19:6730055-6732068	0	-	6730055	6730055	8553170	6	329,68,84,50,44,44,	0,931,1143,1417,1835,1969,
#Deleted in new
chr19	6730067	6732337	chr19:6730067-6732337	0	-	6730311	6732337	789624	7	317,125,36,50,44,131,75,	0,919,1131,1405,1823,1957,2195,
#Partially deleted in new
chr19	6730084	6737509	chr19:6730084-6737509	0	-	6735617	6737509	789624	17	300,125,36,50,44,131,118,74,134,105,69,50,125,165,51,120,53,	0,902,1114,1388,1806,1940,2178,2391,3083,3485,3760,3920,4098,5455,5823,6507,7372,
#Partially deleted in new
chr19	6730085	6737260	chr19:6730085-6737260	1	-	6730311	6733298	789624	18	299,125,84,50,44,131,118,74,76,134,105,69,50,125,83,51,120,271,	0,901,1113,1387,1805,1939,2177,2390,2901,3082,3484,3759,3919,4097,5536,5822,6506,6904,
#Partially deleted in new
chr19	6730097	6737560	chr19:6730097-6737560	0	-	6732471	6737560	789624	18	287,125,84,50,44,131,118,78,76,134,105,69,50,125,83,51,120,104,	0,889,1101,1375,1793,1927,2165,2374,2889,3070,3472,3747,3907,4085,5524,5810,6494,7359,
#Deleted in new
chr19	6731252	6733301	chr19:6731252-6733301	0	-	6731252	6733301	789624	7	30,50,44,131,118,74,134,	0,220,638,772,1010,1223,1915,
#Deleted in new
chr19	6732082	6732773	chr19:6732082-6732773	0	-	6732082	6732082	8553170	3	73,118,298,	0,180,393,
#Partially deleted in new
chr19	6733189	6737317	chr19:6733189-6737317	0	-	6733189	6733298	789624	9	112,105,69,50,125,83,51,120,50,	0,380,655,815,993,2432,2718,3402,4078,
#Partially deleted in new
chr19	6733233	6737539	chr19:6733233-6737539	0	-	6733905	6737539	789624	8	68,105,69,50,125,51,120,83,	0,336,611,771,949,2674,3358,4223,
#Partially deleted in new
chr19	6733569	6737574	chr19:6733569-6737574	0	-	6733569	6737574	789624	7	105,69,50,125,83,120,118,	0,275,435,613,2052,3022,3887,
#Partially deleted in new
chr19	6733934	6737321	chr19:6733934-6737321	0	-	6733934	6733934	8553170	6	120,125,83,51,120,332,	0,248,1687,1973,2657,3055,
#Partially deleted in new
chr19	6735373	6737549	chr19:6735373-6737549	0	-	6735373	6735373	8553170	4	331,51,120,93,	0,534,1218,2083,
#Partially deleted in new
chr19	6735621	6737273	chr19:6735621-6737273	0	-	6735621	6735621	8553170	3	83,51,682,	0,286,970,
#Partially deleted in new
chr19	6735907	6736784	chr19:6735907-6736784	0	-	6735907	6735907	8553170	2	51,193,	0,684,
#Deleted in new
chr19	6736711	6736778	chr19:6736711-6736778	3	-	6736711	6736711	5263520	1	67,	0,
#Partially deleted in new
chr19	6737924	6751500	chr19:6737924-6751500	1	+	6743093	6751211	789624	14	346,116,57,148,63,105,129,147,195,110,133,140,122,438,	0,3085,3300,5042,5269,5569,5783,6629,6875,8527,12009,12367,12587,13138,
#Partially deleted in new
chr19	6739031	6743081	chr19:6739031-6743081	0	+	6739031	6739031	8553170	4	257,116,57,115,	0,1978,2193,3935,
#Partially deleted in new
chr19	6739679	6751526	chr19:6739679-6751526	3	+	6739761	6751211	0	14	106,116,57,148,63,105,129,147,195,110,133,140,122,464,	0,1330,1545,3287,3514,3814,4028,4874,5120,6772,10254,10612,10832,11383,
#Partially deleted in new
chr19	6739713	6751509	chr19:6739713-6751509	0	+	6739761	6746461	789624	15	72,116,57,148,63,105,129,147,195,19,129,133,140,122,447,	0,1296,1511,3253,3480,3780,3994,4840,5086,6464,6719,10220,10578,10798,11349,
#Partially deleted in new
chr19	6739726	6751523	chr19:6739726-6751523	1	+	6739761	6751211	0	15	59,116,57,148,63,105,129,147,195,168,110,133,140,122,461,	0,1283,1498,3240,3467,3767,3981,4827,5073,6302,6725,10207,10565,10785,11336,
#Partially deleted in new
chr19	6739726	6751526	chr19:6739726-6751526	0	+	6739726	6739726	8553170	13	59,116,57,148,63,105,129,147,195,110,133,342,464,	0,1283,1498,3240,3467,3767,3981,4827,5073,6725,10207,10565,11336,
#Partially deleted in new
chr19	6739761	6751464	chr19:6739761-6751464	1	+	6739761	6751326	789624	14	24,116,57,148,63,105,129,147,195,110,133,140,122,431,	0,1248,1463,3205,3432,3732,3946,4792,5038,6690,10172,10530,10750,11272,
#Partially deleted in new
chr19	6740682	6745200	chr19:6740682-6745200	0	+	6740682	6740682	8553170	8	443,57,148,63,105,129,147,401,	0,542,2284,2511,2811,3025,3871,4117,
#Partially deleted in new
chr19	6740908	6743890	chr19:6740908-6743890	0	+	6740908	6740908	8553170	5	217,57,148,405,183,	0,316,2058,2285,2799,
#Partially deleted in new
chr19	6740917	6743769	chr19:6740917-6743769	0	+	6743093	6743769	789624	5	208,148,63,105,62,	0,2049,2276,2576,2790,
#Partially deleted in new
chr19	6740943	6743829	chr19:6740943-6743829	0	+	6740943	6740943	8553170	5	338,148,63,105,122,	0,2023,2250,2550,2764,
#Partially deleted in new
chr19	6741224	6743412	chr19:6741224-6743412	0	+	6741224	6741224	8553170	4	57,148,63,43,	0,1742,1969,2145,
#Partially deleted in new
chr19	6746307	6750373	chr19:6746307-6750373	0	+	6746307	6746307	8553170	3	254,133,82,	0,3626,3984,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	6748292	6751467	chr19:6748292-6751467	3	-	6748292	6748292	8553170	2	579,107,	0,3068,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	6752159	6755241	chr19:6752159-6755241	0	-	6752159	6752159	8553170	3	69,32,411,	0,2540,2671,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	6752164	6767435	chr19:6752164-6767435	1	-	6752592	6763732	789624	8	589,186,374,116,485,77,137,49,	0,1291,1887,2451,2666,7429,11515,15222,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	6752297	6767588	chr19:6752297-6767588	3	-	6752592	6763748	789624	10	456,186,112,175,116,485,77,350,137,202,	0,1158,1754,1953,2318,2533,7296,8340,11382,15089,
#Partially deleted in new
chr19	6753582	6767435	chr19:6753582-6767435	0	-	6753582	6753582	8553170	8	59,112,481,485,77,350,137,49,	0,469,668,1248,6011,7055,10097,13804,
#Partially deleted in new
chr19	6754615	6767463	chr19:6754615-6767463	0	-	6754615	6763748	789624	6	116,102,77,350,137,77,	0,215,4978,6022,9064,12771,
#Partially deleted in new
chr19	6754905	6767425	chr19:6754905-6767425	0	-	6754905	6754905	8553170	3	410,137,39,	0,8774,12481,
#Partially deleted in new
chr19	6754973	6761165	chr19:6754973-6761165	0	-	6754973	6754973	8553170	4	342,77,350,76,	0,4620,5664,6116,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	6757329	6764481	chr19:6757329-6764481	0	-	6757329	6757329	8553170	3	2341,350,802,	0,3308,6350,
#Partially deleted in new
chr19	6772713	6857366	chr19:6772713-6857366	1	+	6772807	6857107	789624	26	298,117,59,69,109,96,69,104,100,96,69,87,86,133,110,102,98,23,46,137,32,117,88,115,152,313,	0,47988,48908,49077,49507,49705,52339,52589,53898,55362,55705,55908,56101,57072,59377,60470,60814,60997,61194,63718,70421,75284,77956,80251,81233,84340,
#Partially deleted in new
chr19	6772725	6857107	chr19:6772725-6857107	3	+	6772807	6857107	0	27	286,117,59,69,109,96,69,104,100,96,69,87,86,133,110,102,98,23,46,137,66,32,117,88,115,152,54,	0,47976,48896,49065,49495,49693,52327,52577,53886,55350,55693,55896,56089,57060,59365,60458,60802,60985,61182,63706,64259,70409,75272,77944,80239,81221,84328,
#Partially deleted in new
chr19	6772727	6857360	chr19:6772727-6857360	1	+	6772807	6857107	0	26	284,117,59,69,109,69,104,100,96,69,87,86,133,110,102,98,23,46,137,66,32,117,88,115,152,307,	0,47974,48894,49063,49493,52325,52575,53884,55348,55691,55894,56087,57058,59363,60456,60800,60983,61180,63704,64257,70407,75270,77942,80237,81219,84326,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr19	6784117	6857366	chr19:6784117-6857366	1	+	6784202	6857107	789624	27	124,117,59,69,109,96,69,104,100,96,69,87,86,133,110,102,98,23,46,137,66,32,117,88,115,152,313,	0,36584,37504,37673,38103,38301,40935,41185,42494,43958,44301,44504,44697,45668,47973,49066,49410,49593,49790,52314,52867,59017,63880,66552,68847,69829,72936,
#Partially deleted in new
chr19	6822436	6827104	chr19:6822436-6827104	0	+	6822436	6822436	8553170	4	78,69,104,493,	0,2616,2866,4175,
#Partially deleted in new
chr19	6828314	6832174	chr19:6828314-6832174	0	+	6828314	6828314	8553170	5	173,87,86,133,84,	0,307,500,1471,3776,
#Partially deleted in new
chr19	6828445	6833733	chr19:6828445-6833733	0	+	6828445	6828445	8553170	7	263,86,133,110,102,98,23,	0,369,1340,3645,4738,5082,5265,
#Partially deleted in new
chr19	6828461	6833625	chr19:6828461-6833625	0	+	6828461	6828461	8553170	6	247,86,46,110,102,98,	0,353,1411,3629,4722,5066,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	6835808	6837026	chr19:6835808-6837026	0	+	6835808	6835808	8553170	2	760,42,	0,1176,
#Partially deleted in new
chr19	6887565	6940459	chr19:6887565-6940459	1	+	6887608	6940029	789624	20	74,63,144,156,120,147,141,147,89,84,178,120,200,171,236,67,92,169,105,436,	0,2915,8832,9583,9862,14309,16244,16470,18867,21123,26087,28683,31982,34147,38800,40579,47421,49677,49978,52458,
#Partially deleted in new
chr19	6887570	6940440	chr19:6887570-6940440	1	+	6887608	6940029	789624	18	69,63,144,141,147,89,84,178,120,200,171,195,236,67,92,169,105,417,	0,2910,8827,16239,16465,18862,21118,26082,28678,31977,34142,37107,38795,40574,47416,49672,49973,52453,
#Partially deleted in new
chr19	6887571	6940459	chr19:6887571-6940459	3	+	6887608	6940029	789624	21	68,63,144,156,120,147,141,147,89,84,178,120,200,171,195,236,67,92,169,105,436,	0,2909,8826,9577,9856,14303,16238,16464,18861,21117,26081,28677,31976,34141,37106,38794,40573,47415,49671,49972,52452,
#Partially deleted in new
chr19	6887576	6940434	chr19:6887576-6940434	1	+	6887608	6940029	789624	18	63,63,144,156,24,89,84,178,120,200,171,195,236,67,92,169,105,411,	0,2904,8821,9572,9851,18856,21112,26076,28672,31971,34136,37101,38789,40568,47410,49666,49967,52447,
#Partially deleted in new
chr19	6887578	6940451	chr19:6887578-6940451	1	+	6887608	6940029	789624	20	61,63,144,120,147,141,147,89,84,178,120,200,171,195,236,166,92,169,105,428,	0,2902,8819,9849,14296,16231,16457,18854,21110,26074,28670,31969,34134,37099,38787,40566,47408,49664,49965,52445,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	6894993	6896832	chr19:6894993-6896832	3	-	6894993	6894993	8553170	1	1839,	0,
#Partially deleted in new
chr19	6896378	6897925	chr19:6896378-6897925	0	+	6896378	6896378	8553170	3	163,156,498,	0,770,1049,
#Partially deleted in new
chr19	6896405	6913735	chr19:6896405-6913735	0	+	6896405	6913735	789624	8	136,156,120,147,141,89,84,83,	0,743,1022,5469,7404,10027,12283,17247,
#Deleted in new
chr19	6898298	6898686	chr19:6898298-6898686	7	+	6898298	6898298	16724991	2	166,106,	0,282,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr19	6952499	6997872	chr19:6952499-6997872	7	-	6952499	6952499	16724991	17	819,96,181,92,67,236,195,165,184,108,136,44,153,123,51,86,74,	0,2104,4544,7797,8475,11110,18669,19740,21991,24748,28580,29227,32196,33789,36287,38265,45299,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	6952532	6997868	chr19:6952532-6997868	4	-	6952532	6952532	16724991	15	786,96,181,92,236,195,165,184,108,691,153,123,51,86,70,	0,2071,4511,7764,11077,18636,19707,21958,24715,28547,32163,33756,36254,38232,45266,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr19	6953065	6997851	chr19:6953065-6997851	4	-	6953065	6953065	16724991	16	253,96,181,92,67,236,195,165,184,108,691,153,123,51,86,53,	0,1538,3978,7231,7909,10544,18103,19174,21425,24182,28014,31630,33223,35721,37699,44733,
#Deleted in new
chr19	6953210	6954904	chr19:6953210-6954904	3	+	6953210	6953210	8553170	2	139,376,	0,1318,
#Partially deleted in new
chr19	6954658	6990798	chr19:6954658-6990798	5	-	6954658	6954658	16724991	15	41,181,92,67,236,195,165,184,108,136,44,153,123,51,34,	0,2385,5638,6316,8951,16510,17581,19832,22589,26421,27068,30037,31630,34128,36106,
#Deleted in new
chr19	7005011	7006074	chr19:7005011-7006074	7	-	7005011	7005011	16724991	1	1063,	0,
#Deleted in new
chr19	7011883	7012679	chr19:7011883-7012679	7	+	7011883	7011883	16724991	1	796,	0,
#Partially deleted in new
chr19	7018968	7021450	chr19:7018968-7021450	3	-	7019160	7021397	789624	2	762,98,	0,2384,
#Partially deleted in new
chr19	7018970	7021432	chr19:7018970-7021432	1	-	7019160	7021397	789624	3	106,588,80,	0,172,2382,
#Partially deleted in new
chr19	7030577	7033011	chr19:7030577-7033011	3	+	7030611	7032894	789624	2	79,699,	0,1735,
#Partially deleted in new
chr19	7037747	7040179	chr19:7037747-7040179	3	-	7037860	7040144	789624	2	695,80,	0,2352,
#Partially deleted in new
chr19	7049320	7051735	chr19:7049320-7051735	3	+	7049373	7051622	789624	2	98,695,	0,1720,
#Partially deleted in new
chr19	7056208	7058640	chr19:7056208-7058640	3	-	7056321	7058605	789624	2	695,80,	0,2352,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	7069443	7084218	chr19:7069443-7084218	3	+	7075074	7083744	789624	8	330,92,110,89,127,96,83,1341,	0,1118,5552,6211,6937,11916,12526,13434,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	7069704	7087968	chr19:7069704-7087968	1	+	7075074	7083744	789624	8	69,92,110,68,127,96,83,5091,	0,857,5291,5971,6676,11655,12265,13173,
#Partially deleted in new
chr19	7112254	7293931	chr19:7112254-7293931	1	-	7117055	7293891	0	21	5156,135,130,160,111,245,68,103,160,140,275,202,168,251,127,215,145,149,322,552,140,	0,7194,8365,10359,10624,13028,14329,16597,19903,29422,30561,40471,50777,53899,55713,58282,60035,62328,72061,155090,181537,
#Partially deleted in new
chr19	7116626	7294034	chr19:7116626-7294034	3	-	7117055	7293891	0	22	784,135,130,160,111,245,68,103,160,140,275,36,202,168,251,127,215,145,149,322,552,243,	0,2822,3993,5987,6252,8656,9957,12225,15531,25050,26189,33870,36099,46405,49527,51341,53910,55663,57956,67689,150718,177165,
#Partially deleted in new
chr19	7120619	7123158	chr19:7120619-7123158	0	-	7120619	7120619	8553170	3	130,160,280,	0,1994,2259,
#Partially deleted in new
chr19	7122569	7125386	chr19:7122569-7125386	0	-	7122569	7122569	8553170	3	204,111,104,	0,309,2713,
#Partially deleted in new
chr19	7141509	7143040	chr19:7141509-7143040	0	-	7141509	7141509	8553170	2	307,225,	0,1306,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	7151970	7293866	chr19:7151970-7293866	0	-	7151970	7151970	8553170	10	957,168,251,127,215,145,149,322,552,75,	0,11061,14183,15997,18566,20319,22612,32345,115374,141821,
#Partially deleted in new
chr19	7159422	7167978	chr19:7159422-7167978	0	-	7159616	7167978	789624	4	223,168,251,11,	0,3609,6731,8545,
#Partially deleted in new
chr19	7348942	7383385	chr19:7348942-7383385	3	+	7362890	7383385	789624	10	299,125,260,151,115,58,45,78,103,324,	0,13838,23869,26777,27700,29451,30179,31974,33849,34119,
#Partially deleted in new
chr19	7382833	7472477	chr19:7382833-7472477	3	+	7382833	7470880	789624	22	61,142,139,113,141,251,126,118,249,77,179,92,183,138,131,57,48,471,307,126,116,1699,	0,228,57510,58819,59078,61370,64209,68315,70633,73493,75678,77069,79318,80984,81726,84084,84237,84380,85991,87070,87292,87945,
#Partially deleted in new
chr19	7395112	7472477	chr19:7395112-7472477	3	+	7440414	7470298	789624	21	135,139,113,141,251,126,118,249,77,179,92,183,138,131,57,48,471,307,126,190,1941,	0,45231,46540,46799,49091,51930,56036,58354,61214,63399,64790,67039,68705,69447,71805,71958,72101,73712,74791,75013,75424,
#Partially deleted in new
chr19	7395151	7441990	chr19:7395151-7441990	0	+	7440414	7441990	789624	4	96,294,113,79,	0,45037,46501,46760,
#Partially deleted in new
chr19	7439687	7472477	chr19:7439687-7472477	1	+	7439940	7470298	789624	20	795,113,141,251,126,118,249,77,179,92,183,138,131,57,48,471,307,126,190,1941,	0,1965,2224,4516,7355,11461,13779,16639,18824,20215,22464,24130,24872,27230,27383,27526,29137,30216,30438,30849,
#Partially deleted in new
chr19	7441718	7444429	chr19:7441718-7444429	0	+	7441718	7441718	8553170	2	334,226,	0,2485,
#Partially deleted in new
chr19	7447062	7472477	chr19:7447062-7472477	0	+	7447062	7470298	789624	15	106,118,249,77,179,92,183,138,131,57,48,453,307,126,2352,	0,4086,6404,9264,11449,12840,15089,16755,17497,19855,20008,20169,21762,22841,23063,
#Partially deleted in new
chr19	7476874	7489019	chr19:7476874-7489019	3	-	7477201	7489010	789624	5	562,63,179,189,69,	0,1439,5158,8963,12076,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	7476875	7497449	chr19:7476875-7497449	1	-	7477201	7485876	789624	7	561,63,179,189,165,141,47,	0,1438,5157,8962,12472,14106,20527,
#Partially deleted in new
chr19	7476893	7483312	chr19:7476893-7483312	0	-	7476893	7476893	8553170	4	543,63,179,51,	0,1420,5139,6368,
#Partially deleted in new
chr19	7476900	7488972	chr19:7476900-7488972	0	-	7477201	7488972	789624	5	353,63,179,189,22,	0,1413,5132,8937,12050,
#Partially deleted in new
chr19	7492975	7504213	chr19:7492975-7504213	0	+	7500822	7504213	789624	3	99,594,93,	0,7830,11145,
#Partially deleted in new
chr19	7497558	7508450	chr19:7497558-7508450	3	+	7500822	7508430	789624	9	124,594,104,101,113,110,202,86,245,	0,3247,6562,6752,7765,7958,8405,9497,10647,
#Partially deleted in new
chr19	7498926	7501364	chr19:7498926-7501364	0	+	7500822	7501364	789624	2	19,559,	0,1879,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	7499641	7501399	chr19:7499641-7501399	0	+	7500822	7501399	789624	2	239,594,	0,1164,
#Partially deleted in new
chr19	7501272	7506066	chr19:7501272-7506066	0	+	7501272	7505440	789624	4	127,104,228,103,	0,2848,4126,4691,
#Deleted in new
chr19	7505519	7506700	chr19:7505519-7506700	0	+	7505519	7505519	8553170	2	107,737,	0,444,
#Partially deleted in new
chr19	7506794	7508447	chr19:7506794-7508447	0	+	7506794	7506794	8553170	2	347,242,	0,1411,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	7507051	7519622	chr19:7507051-7519622	0	+	7507051	7507051	8553170	3	90,126,418,	0,6828,12153,
#Partially deleted in new
chr19	7507081	7519526	chr19:7507081-7519526	3	+	7507081	7519288	789624	2	60,322,	0,12123,
#Partially deleted in new
chr19	7515291	7519751	chr19:7515291-7519751	0	+	7519242	7519751	789624	2	115,547,	0,3913,
#Partially deleted in new
chr19	7516117	7521026	chr19:7516117-7521026	3	+	7519242	7520949	789624	2	132,1822,	0,3087,
#Deleted in new
chr19	7519915	7520460	chr19:7519915-7520460	3	-	7519915	7519915	8553170	2	139,154,	0,391,
#Partially deleted in new
chr19	7522625	7534009	chr19:7522625-7534009	3	+	7522750	7533795	0	14	156,206,168,166,109,97,100,107,150,102,123,216,131,251,	0,2335,3813,4135,4894,5238,5532,5971,6195,6475,6964,7660,10897,11133,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	7522634	7525991	chr19:7522634-7525991	0	+	7522634	7522634	8553170	2	147,1031,	0,2326,
#Partially deleted in new
chr19	7522670	7533990	chr19:7522670-7533990	0	+	7522670	7522670	8553170	13	111,206,168,166,441,100,107,150,102,123,216,131,232,	0,2290,3768,4090,4849,5487,5926,6150,6430,6919,7615,10852,11088,
#Partially deleted in new
chr19	7522686	7527894	chr19:7522686-7527894	0	+	7522750	7527894	789624	5	95,206,168,166,31,	0,2274,3752,4074,5177,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	7526239	7527165	chr19:7526239-7527165	0	+	7526239	7526239	8553170	2	367,405,	0,521,
#Partially deleted in new
chr19	7526380	7527771	chr19:7526380-7527771	0	+	7526380	7526380	8553170	3	226,166,252,	0,380,1139,
#Deleted in new
chr19	7528653	7530501	chr19:7528653-7530501	0	+	7528653	7528653	8553170	4	317,102,123,216,	0,447,936,1632,
#Partially deleted in new
chr19	7528959	7533990	chr19:7528959-7533990	0	+	7528959	7533872	789624	6	11,102,123,67,131,232,	0,141,630,1475,4563,4799,
#Deleted in new
chr19	7528970	7530400	chr19:7528970-7530400	0	+	7528970	7528970	8553170	3	232,123,115,	0,619,1315,
#Deleted in new
chr19	7533393	7533990	chr19:7533393-7533990	0	+	7533393	7533393	8553170	2	260,232,	0,365,
#Partially deleted in new
chr19	7533594	7540059	chr19:7533594-7540059	3	+	7533594	7533790	789624	10	59,110,72,68,153,69,88,83,98,142,	0,164,573,784,1155,1914,2338,2596,2854,6323,
#Partially deleted in new
chr19	7534003	7561764	chr19:7534003-7561764	3	+	7535550	7561562	789624	35	236,153,69,88,83,98,141,160,81,129,81,163,84,110,168,78,206,132,124,114,76,144,64,169,183,119,157,117,70,117,302,117,97,110,277,	0,746,1505,1929,2187,2445,5914,6145,6626,6919,7350,7518,7980,8557,8757,9003,15903,16294,16513,16990,17358,19868,20205,20551,20889,21245,21603,22449,22651,23164,24846,26644,27010,27204,27484,
#Deleted in new
chr19	7534151	7535582	chr19:7534151-7535582	0	+	7534151	7534151	8553170	3	88,68,833,	0,227,598,
#Partially deleted in new
chr19	7534152	7540024	chr19:7534152-7540024	0	+	7535550	7540024	789624	8	87,68,153,69,88,83,98,107,	0,226,597,1356,1780,2038,2296,5765,
#Deleted in new
chr19	7534190	7534834	chr19:7534190-7534834	0	+	7534190	7534190	8553170	2	49,456,	0,188,
#Partially deleted in new
chr19	7534198	7540254	chr19:7534198-7540254	0	+	7535550	7540254	789624	9	41,153,87,69,88,83,98,141,106,	0,551,928,1310,1734,1992,2250,5719,5950,
#Partially deleted in new
chr19	7534241	7561761	chr19:7534241-7561761	1	+	7535550	7561562	789624	34	205,153,69,88,83,98,141,160,81,129,81,163,84,110,168,206,132,124,114,76,141,64,169,183,119,157,117,70,117,302,117,97,110,274,	0,508,1267,1691,1949,2207,5676,5907,6388,6681,7112,7280,7742,8319,8519,15665,16056,16275,16752,17120,19633,19967,20313,20651,21007,21365,22211,22413,22926,24608,26406,26772,26966,27246,
#Deleted in new
chr19	7534516	7536020	chr19:7534516-7536020	0	+	7535550	7536020	789624	3	386,69,88,	0,992,1416,
#Partially deleted in new
chr19	7534749	7561761	chr19:7534749-7561761	1	+	7535550	7561562	789624	34	153,69,232,83,98,141,160,81,129,81,163,84,110,168,78,206,132,124,114,76,144,64,169,183,119,157,117,70,117,302,117,97,110,274,	0,759,1039,1441,1699,5168,5399,5880,6173,6604,6772,7234,7811,8011,8257,15157,15548,15767,16244,16612,19122,19459,19805,20143,20499,20857,21703,21905,22418,24100,25898,26264,26458,26738,
#Partially deleted in new
chr19	7534749	7561764	chr19:7534749-7561764	1	+	7535550	7561562	789624	35	153,76,69,88,83,98,141,160,81,129,81,163,84,110,168,78,206,132,124,114,76,144,64,169,183,119,157,117,70,117,302,117,97,110,277,	0,377,759,1183,1441,1699,5168,5399,5880,6173,6604,6772,7234,7811,8011,8257,15157,15548,15767,16244,16612,19122,19459,19805,20143,20499,20857,21703,21905,22418,24100,25898,26264,26458,26738,
#Partially deleted in new
chr19	7534946	7540172	chr19:7534946-7540172	0	+	7535550	7540172	789624	7	59,69,88,83,98,141,24,	0,562,986,1244,1502,4971,5202,
#Partially deleted in new
chr19	7535024	7539974	chr19:7535024-7539974	0	+	7535550	7539974	789624	6	189,69,88,83,98,57,	0,484,908,1166,1424,4893,
#Partially deleted in new
chr19	7535705	7561576	chr19:7535705-7561576	1	+	7535788	7561562	789624	32	315,83,98,141,160,81,129,81,163,84,110,168,78,206,132,124,114,76,141,64,169,183,119,157,117,70,117,302,117,97,110,89,	0,485,743,4212,4443,4924,5217,5648,5816,6278,6855,7055,7301,14201,14592,14811,15288,15656,18169,18503,18849,19187,19543,19901,20747,20949,21462,23144,24942,25308,25502,25782,
#Partially deleted in new
chr19	7535980	7540158	chr19:7535980-7540158	0	+	7535980	7535980	8553170	4	293,98,141,10,	0,468,3937,4168,
#Partially deleted in new
chr19	7536342	7540709	chr19:7536342-7540709	0	+	7536342	7536342	8553170	4	204,141,160,80,	0,3575,3806,4287,
#Partially deleted in new
chr19	7539982	7542670	chr19:7539982-7542670	0	+	7539982	7542670	789624	7	76,160,81,129,81,163,110,	0,166,647,940,1371,1539,2578,
#Deleted in new
chr19	7540037	7541632	chr19:7540037-7541632	0	+	7540037	7541632	789624	6	21,160,81,120,81,111,	0,111,592,894,1316,1484,
#Partially deleted in new
chr19	7541394	7550375	chr19:7541394-7550375	0	+	7541394	7541394	8553170	7	40,163,84,110,324,206,78,	0,127,589,1166,1366,8512,8903,
#Partially deleted in new
chr19	7541447	7550413	chr19:7541447-7550413	0	+	7541447	7541447	8553170	7	237,84,110,168,78,206,116,	0,536,1113,1313,1559,8459,8850,
#Partially deleted in new
chr19	7542507	7550099	chr19:7542507-7550099	0	+	7542507	7542507	8553170	4	163,168,78,193,	0,253,499,7399,
#Partially deleted in new
chr19	7550825	7554243	chr19:7550825-7554243	0	+	7550825	7550825	8553170	4	282,76,141,35,	0,536,3049,3383,
#Partially deleted in new
chr19	7555260	7558953	chr19:7555260-7558953	0	+	7555260	7558953	789624	6	107,157,117,70,117,104,	0,346,1192,1394,1705,3589,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	7556513	7557519	chr19:7556513-7557519	0	+	7556513	7556513	8553170	2	211,352,	0,654,
#Partially deleted in new
chr19	7558966	7561764	chr19:7558966-7561764	0	+	7558966	7561562	789624	4	185,97,110,277,	0,2047,2241,2521,
#Deleted in new
chr19	7560590	7561764	chr19:7560590-7561764	0	+	7560590	7560590	8553170	4	174,97,110,277,	0,423,617,897,
#Partially deleted in new
chr19	7595901	7618095	chr19:7595901-7618095	3	+	7596002	7618057	789624	17	249,254,123,96,139,140,94,55,74,70,1477,140,302,100,113,119,344,	0,9324,10369,10574,12224,14574,14798,14975,15193,15615,15785,19281,19516,20621,21424,21641,21850,
#Partially deleted in new
chr19	7595901	7618304	chr19:7595901-7618304	1	+	7596002	7618057	789624	19	249,254,123,96,33,48,139,140,94,55,74,70,1477,140,302,100,113,119,553,	0,9324,10369,10574,10875,11919,12224,14574,14798,14975,15193,15615,15785,19281,19516,20621,21424,21641,21850,
#Partially deleted in new
chr19	7614633	7618095	chr19:7614633-7618095	0	+	7614633	7614633	8553170	6	689,302,100,113,119,344,	0,784,1889,2692,2909,3118,
#Partially deleted in new
chr19	7616405	7617431	chr19:7616405-7617431	0	+	7616405	7616405	8553170	2	217,106,	0,920,
#Deleted in new
chr19	7617438	7617505	chr19:7617438-7617505	3	+	7617438	7617438	5263520	1	67,	0,
#Partially deleted in new
chr19	7619524	7629565	chr19:7619524-7629565	3	-	7619585	7629527	0	19	123,110,130,172,123,191,163,114,132,132,120,152,145,165,135,198,124,149,89,	0,222,421,750,1022,1321,1610,2806,3005,3237,3645,4206,4776,6355,6611,7718,8203,8625,9952,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	7619525	7628270	chr19:7619525-7628270	0	-	7619525	7619525	8553170	11	331,130,395,1599,132,132,120,152,145,391,1028,	0,420,749,1320,3004,3236,3644,4205,4775,6354,7717,
#Deleted in new
chr19	7620274	7621297	chr19:7620274-7621297	0	-	7620274	7620274	8553170	3	395,191,163,	0,571,860,
#Deleted in new
chr19	7620892	7621533	chr19:7620892-7621533	0	-	7620892	7620892	8553170	2	144,399,	0,242,
#Partially deleted in new
chr19	7629736	7631956	chr19:7629736-7631956	3	+	7629833	7631556	789624	4	124,87,24,484,	0,836,1086,1736,
#Partially deleted in new
chr19	7629795	7643048	chr19:7629795-7643048	2	+	7629833	7642252	789624	7	65,24,85,131,108,58,66,	0,1027,12238,12407,12633,12970,13187,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	7629808	7631623	chr19:7629808-7631623	0	+	7629808	7629808	8553170	1	1815,	0,
#Partially deleted in new
chr19	7629811	7639807	chr19:7629811-7639807	0	+	7629833	7631667	789624	8	49,87,24,109,92,50,82,77,	0,761,1011,1838,2146,8914,9207,9919,
#Partially deleted in new
chr19	7629813	7631620	chr19:7629813-7631620	1	+	7629833	7631556	789624	3	47,24,148,	0,1009,1659,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	7629823	7631030	chr19:7629823-7631030	1	+	7629833	7630915	789624	3	37,87,208,	0,749,999,
#Deleted in new
chr19	7629823	7630852	chr19:7629823-7630852	0	+	7629823	7629823	8553170	2	37,280,	0,749,
#Partially deleted in new
chr19	7629835	7642118	chr19:7629835-7642118	1	+	7629835	7638734	789624	10	25,87,24,50,82,77,79,104,149,85,	0,737,987,8890,9183,9895,10895,11064,11869,12198,
#Partially deleted in new
chr19	7629838	7631624	chr19:7629838-7631624	0	+	7629838	7631237	789624	5	22,87,24,90,152,	0,734,984,1393,1634,
#Partially deleted in new
chr19	7630524	7631624	chr19:7630524-7631624	0	+	7630524	7630524	8553170	2	322,152,	0,948,
#Deleted in new
chr19	7631610	7632971	chr19:7631610-7632971	3	-	7631688	7632955	789624	4	198,125,115,19,	0,782,1105,1342,
#Deleted in new
chr19	7631614	7633748	chr19:7631614-7633748	1	-	7631688	7633457	789624	4	194,125,115,342,	0,778,1101,1792,
#Partially deleted in new
chr19	7633765	7636990	chr19:7633765-7636990	3	-	7633765	7633765	8553170	2	124,719,	0,2506,
#Partially deleted in new
chr19	7636880	7641005	chr19:7636880-7641005	0	+	7639027	7641005	789624	6	155,50,82,77,79,106,	0,1845,2138,2850,3850,4019,
#Partially deleted in new
chr19	7637104	7642118	chr19:7637104-7642118	0	+	7637149	7642118	789624	6	82,50,82,104,149,85,	0,1621,1914,3795,4600,4929,
#Partially deleted in new
chr19	7637104	7639464	chr19:7637104-7639464	0	+	7637104	7637104	8553170	2	82,739,	0,1621,
#Partially deleted in new
chr19	7637112	7647872	chr19:7637112-7647872	1	+	7637149	7647810	0	19	74,50,82,77,112,104,149,85,131,108,58,66,81,139,110,96,86,158,148,	0,1613,1906,2618,3585,3787,4592,4921,5090,5316,5653,5870,6052,7501,8084,9136,10049,10241,10612,
#Partially deleted in new
chr19	7637112	7640156	chr19:7637112-7640156	0	+	7637112	7637112	8553170	4	74,50,82,426,	0,1613,1906,2618,
#Partially deleted in new
chr19	7637114	7639485	chr19:7637114-7639485	0	+	7637114	7637114	8553170	3	72,50,467,	0,1611,1904,
#Partially deleted in new
chr19	7637118	7647873	chr19:7637118-7647873	3	+	7637149	7647810	0	19	68,50,82,77,79,104,149,85,131,108,58,66,81,139,110,96,86,158,149,	0,1607,1900,2612,3612,3781,4586,4915,5084,5310,5647,5864,6046,7495,8078,9130,10043,10235,10606,
#Partially deleted in new
chr19	7637121	7647810	chr19:7637121-7647810	0	+	7637149	7645202	789624	19	65,50,82,77,79,104,149,85,131,108,58,66,139,56,110,96,86,158,86,	0,1604,1897,2609,3609,3778,4583,4912,5081,5307,5644,5861,7492,7757,8075,9127,10040,10232,10603,
#Partially deleted in new
chr19	7637126	7647873	chr19:7637126-7647873	1	+	7637149	7647810	0	19	60,50,82,77,70,104,149,85,131,108,58,66,81,139,110,96,86,158,149,	0,1599,1892,2604,3613,3773,4578,4907,5076,5302,5639,5856,6038,7487,8070,9122,10035,10227,10598,
#Partially deleted in new
chr19	7638736	7647844	chr19:7638736-7647844	0	+	7638736	7642252	789624	16	39,82,77,79,104,85,131,108,58,66,81,139,110,86,158,120,	0,282,994,1994,2163,3297,3466,3692,4029,4246,4428,5877,6460,8425,8617,8988,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	7639840	7641201	chr19:7639840-7641201	1	+	7639840	7641201	789624	7	21,51,141,219,63,391,302,	0,93,148,294,514,578,1059,
#Partially deleted in new
chr19	7640740	7641913	chr19:7640740-7641913	0	+	7640740	7640740	8553170	2	263,209,	0,964,
#Deleted in new
chr19	7641829	7643210	chr19:7641829-7643210	0	+	7641829	7641829	8553170	6	24,85,131,395,66,46,	0,204,373,599,1153,1335,
#Deleted in new
chr19	7642245	7643274	chr19:7642245-7643274	0	+	7642245	7642245	8553170	5	88,108,58,66,110,	0,183,520,737,919,
#Deleted in new
chr19	7642780	7647873	chr19:7642780-7647873	0	+	7642780	7647764	789624	8	43,66,81,139,110,96,86,149,	0,202,384,1833,2416,3468,4381,4944,
#Deleted in new
chr19	7643214	7647838	chr19:7643214-7647838	0	+	7643214	7646339	789624	7	31,139,110,173,86,158,114,	0,1399,1982,2957,3947,4139,4510,
#Deleted in new
chr19	7644348	7646438	chr19:7644348-7646438	0	+	7644348	7644348	8553170	3	404,110,190,	0,848,1900,
#Deleted in new
chr19	7644512	7647872	chr19:7644512-7647872	0	+	7644512	7644512	8553170	3	240,110,1624,	0,684,1736,
#Deleted in new
chr19	7644565	7645394	chr19:7644565-7645394	0	+	7644565	7644565	8553170	2	187,198,	0,631,
#Deleted in new
chr19	7645195	7647873	chr19:7645195-7647873	0	+	7645195	7645195	8553170	4	111,96,350,149,	0,1053,1966,2529,
#Deleted in new
chr19	7645958	7647810	chr19:7645958-7647810	1	+	7646287	7647810	789624	4	386,86,158,86,	0,1203,1395,1766,
#Deleted in new
chr19	7647054	7647455	chr19:7647054-7647455	0	+	7647054	7647054	8553170	2	193,102,	0,299,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	7665716	7666476	chr19:7665716-7666476	7	+	7665716	7665716	16724991	2	235,223,	0,537,
#Partially deleted in new
chr19	7669043	7670454	chr19:7669043-7670454	3	+	7669326	7670349	0	4	78,128,78,236,	0,273,777,1175,
#Partially deleted in new
chr19	7669085	7670454	chr19:7669085-7670454	1	+	7669326	7670349	0	3	36,128,236,	0,231,1133,
#Partially deleted in new
chr19	7669326	7670349	chr19:7669326-7670349	1	+	7669326	7670349	0	2	118,131,	0,892,
#Partially deleted in new
chr19	7676627	7679826	chr19:7676627-7679826	3	+	7677081	7679114	789624	7	548,90,138,51,114,60,729,	0,1009,1476,1722,1863,2296,2470,
#Partially deleted in new
chr19	7677087	7679409	chr19:7677087-7679409	1	+	7677120	7679114	789624	6	88,138,51,114,60,312,	0,1016,1262,1403,1836,2010,
#Deleted in new
chr19	7677928	7678984	chr19:7677928-7678984	0	+	7677928	7677928	8553170	4	313,51,114,61,	0,421,562,995,
#Partially deleted in new
chr19	7678500	7682854	chr19:7678500-7682854	3	+	7678500	7682489	789624	3	104,60,613,	0,423,3741,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	7680842	7687703	chr19:7680842-7687703	3	+	7682253	7682820	789624	2	36,5462,	0,1399,
#Deleted in new
chr19	7680874	7682856	chr19:7680874-7682856	1	+	7682253	7682820	789624	2	175,615,	0,1367,
#Deleted in new
chr19	7680878	7682858	chr19:7680878-7682858	1	+	7682253	7682820	789624	2	148,617,	0,1363,
#Deleted in new
chr19	7682242	7682854	chr19:7682242-7682854	1	+	7682253	7682820	789624	2	80,331,	0,281,
#Partially deleted in new
chr19	7688757	7699479	chr19:7688757-7699479	1	-	7689192	7699395	789624	10	673,107,152,90,63,63,63,54,114,103,	0,1401,1648,8067,8255,8478,8769,9598,9983,10619,
#Partially deleted in new
chr19	7688773	7700083	chr19:7688773-7700083	0	-	7688773	7688773	8553170	10	657,107,152,90,63,63,63,499,107,109,	0,1385,1632,8051,8239,8462,8753,9582,10965,11201,
#Partially deleted in new
chr19	7688775	7702146	chr19:7688775-7702146	3	-	7689192	7699760	0	11	655,107,152,90,63,63,63,54,114,107,128,	0,1383,1630,8049,8237,8460,8751,9580,9965,10963,13243,
#Partially deleted in new
chr19	7688780	7702111	chr19:7688780-7702111	1	-	7689192	7699760	0	11	650,107,152,90,63,63,63,54,114,107,97,	0,1378,1625,8044,8232,8455,8746,9575,9960,10958,13234,
#Partially deleted in new
chr19	7688781	7702093	chr19:7688781-7702093	0	-	7688781	7688781	8553170	10	649,107,152,90,63,63,63,499,107,79,	0,1377,1624,8043,8231,8454,8745,9574,10957,13233,
#Partially deleted in new
chr19	7688943	7702131	chr19:7688943-7702131	0	-	7688943	7688943	8553170	10	487,107,152,90,286,63,54,114,107,117,	0,1215,1462,7881,8069,8583,9412,9797,10795,13071,
#Partially deleted in new
chr19	7690486	7700084	chr19:7690486-7700084	0	-	7690486	7699760	789624	7	71,90,63,63,54,114,346,	0,6338,6749,7040,7869,8254,9252,
#Partially deleted in new
chr19	7728956	7732171	chr19:7728956-7732171	3	-	7729365	7732102	789624	9	548,116,149,90,105,63,54,111,124,	0,864,1062,1394,1798,2069,2309,2704,3091,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	7730820	7733906	chr19:7730820-7733906	0	-	7730820	7733845	789624	7	39,63,54,111,75,98,69,	0,205,445,840,1227,1971,3017,
#Partially deleted in new
chr19	7731038	7732205	chr19:7731038-7732205	0	-	7731038	7731038	8553170	3	297,111,117,	0,622,1050,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	7739993	7747534	chr19:7739993-7747534	3	-	7743038	7747511	0	7	3247,113,152,570,72,60,69,	0,4113,4947,5524,6466,7312,7472,
#Partially deleted in new
chr19	7742510	7747564	chr19:7742510-7747564	1	-	7743038	7747511	789624	7	730,113,152,87,72,60,99,	0,1596,2430,3490,3949,4795,4955,
#Partially deleted in new
chr19	7742646	7747511	chr19:7742646-7747511	1	-	7743038	7747411	789624	5	594,113,152,432,206,	0,1460,2294,3009,4659,
#Partially deleted in new
chr19	7742849	7747518	chr19:7742849-7747518	1	-	7743038	7747411	0	5	391,113,152,570,213,	0,1257,2091,2668,4456,
#Partially deleted in new
chr19	7743038	7747511	chr19:7743038-7747511	1	-	7743038	7747511	0	5	202,113,152,570,46,	0,1068,1902,2479,4427,
#Partially deleted in new
chr19	7743038	7747511	chr19:7743038-7747511	1	-	7743038	7747511	0	6	202,113,152,570,60,46,	0,1068,1902,2479,4267,4427,
#Partially deleted in new
chr19	7743038	7747511	chr19:7743038-7747511	1	-	7743038	7747511	0	7	202,95,152,570,72,60,46,	0,1068,1902,2479,3421,4267,4427,
#Partially deleted in new
chr19	7743038	7747511	chr19:7743038-7747511	1	-	7743038	7747511	0	6	202,87,40,72,60,46,	0,1068,3009,3421,4267,4427,
#Partially deleted in new
chr19	7743038	7747511	chr19:7743038-7747511	1	-	7743038	7747511	789624	5	202,113,152,294,46,	0,1068,1902,2755,4427,
#Partially deleted in new
chr19	7743038	7747511	chr19:7743038-7747511	1	-	7743038	7747511	0	7	202,113,152,294,72,60,46,	0,1068,1902,2755,3421,4267,4427,
#Partially deleted in new
chr19	7743174	7747511	chr19:7743174-7747511	1	-	7743174	7747411	0	4	66,152,570,206,	0,1766,2343,4131,
#Deleted in new
chr19	7750683	7751161	chr19:7750683-7751161	7	+	7750683	7750683	16724991	1	478,	0,
#Partially deleted in new
chr19	7763148	7769604	chr19:7763148-7769604	1	+	7763266	7768988	0	8	164,84,84,185,316,152,113,767,	0,244,2036,2489,2743,3507,4367,5689,
#Partially deleted in new
chr19	7763148	7769605	chr19:7763148-7769605	3	+	7763266	7768988	0	7	164,84,84,570,152,113,768,	0,244,2036,2489,3507,4367,5689,
#Partially deleted in new
chr19	7763148	7769604	chr19:7763148-7769604	1	+	7763266	7768988	789624	7	164,84,185,316,152,113,767,	0,2036,2489,2743,3507,4367,5689,
#Partially deleted in new
chr19	7763148	7769604	chr19:7763148-7769604	1	+	7763266	7768988	0	7	164,84,206,247,152,113,767,	0,244,2468,2743,3507,4367,5689,
#Partially deleted in new
chr19	7763148	7769604	chr19:7763148-7769604	1	+	7763266	7768988	789624	9	164,18,42,65,7,570,152,113,767,	0,244,286,2036,2221,2489,3507,4367,5689,
#Partially deleted in new
chr19	7763216	7769604	chr19:7763216-7769604	1	+	7763266	7768876	0	5	96,84,570,152,767,	0,1968,2421,3439,5621,
#Partially deleted in new
chr19	7763243	7766802	chr19:7763243-7766802	0	+	7763266	7766802	789624	4	69,84,570,147,	0,149,2394,3412,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	7763261	7768575	chr19:7763261-7768575	0	+	7763261	7763261	8553170	2	51,2938,	0,2376,
#Partially deleted in new
chr19	7763266	7768988	chr19:7763266-7768988	1	+	7763266	7768988	0	6	46,84,246,152,113,151,	0,126,2350,3389,4249,5571,
#Partially deleted in new
chr19	7763266	7768988	chr19:7763266-7768988	1	+	7763266	7768988	789624	6	46,84,453,152,113,151,	0,126,2350,3389,4249,5571,
#Partially deleted in new
chr19	7763266	7768988	chr19:7763266-7768988	1	+	7763266	7768876	0	6	46,84,84,294,152,151,	0,126,1918,2371,3389,5571,
#Partially deleted in new
chr19	7763266	7768988	chr19:7763266-7768988	0	+	7763266	7763266	8553170	5	46,84,84,1170,151,	0,126,1918,2371,5571,
#Partially deleted in new
chr19	7763266	7768988	chr19:7763266-7768988	0	+	7763266	7763266	8553170	4	46,84,1191,151,	0,126,2350,5571,
#Partially deleted in new
chr19	7766593	7769118	chr19:7766593-7769118	0	+	7766593	7766593	8553170	3	214,113,281,	0,922,2244,
#Partially deleted in new
chr19	7787548	7790621	chr19:7787548-7790621	7	+	7787548	7787548	16724991	9	52,109,54,63,105,96,148,116,127,	0,321,775,1019,1247,1660,1947,2211,2946,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	7813614	7814425	chr19:7813614-7814425	7	-	7813614	7813614	16724991	2	223,274,	0,537,
#Partially deleted in new
chr19	7830232	7864976	chr19:7830232-7864976	3	+	7846542	7863702	789624	19	149,184,190,225,75,126,144,90,98,61,54,141,129,141,156,147,96,96,1553,	0,16263,17499,18688,19023,19764,21201,21448,22853,23040,25782,27958,30328,31645,31889,32155,32739,32952,33191,
#Partially deleted in new
chr19	7846542	7863702	chr19:7846542-7863702	1	+	7846542	7863702	789624	19	137,190,225,75,126,144,90,98,61,54,33,141,129,141,156,147,96,96,279,	0,1189,2378,2713,3454,4891,5138,6543,6730,9472,10549,11648,14018,15335,15579,15845,16429,16642,16881,
#Partially deleted in new
chr19	7848909	7853006	chr19:7848909-7853006	0	+	7848909	7848909	8553170	6	236,75,126,144,90,200,	0,346,1087,2524,2771,3897,
#Partially deleted in new
chr19	7850020	7853616	chr19:7850020-7853616	0	+	7850020	7853540	789624	6	102,144,90,98,61,115,	0,1413,1660,3065,3252,3481,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	7851488	7859190	chr19:7851488-7859190	0	+	7851488	7851488	8553170	6	89,90,98,61,54,2212,	0,192,1597,1784,4526,5490,
#Deleted in new
chr19	7858192	7858506	chr19:7858192-7858506	0	+	7858192	7858192	8553170	2	139,99,	0,215,
#Deleted in new
chr19	7860584	7863567	chr19:7860584-7863567	0	+	7860584	7863567	789624	4	105,141,27,144,	0,1293,2669,2839,
#Deleted in new
chr19	7868718	7874379	chr19:7868718-7874379	3	-	7869032	7873689	789624	6	826,3042,113,103,278,94,	0,996,4130,4478,4700,5567,
#Deleted in new
chr19	7869063	7873597	chr19:7869063-7873597	0	-	7869498	7873597	789624	6	481,203,182,113,103,179,	0,651,3241,3785,4133,4355,
#Deleted in new
chr19	7870560	7871296	chr19:7870560-7871296	3	+	7870560	7870560	8553170	2	402,265,	0,471,
#Partially deleted in new
chr19	7879444	7880120	chr19:7879444-7880120	7	-	7879444	7879444	16724991	1	676,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	7886976	7887096	chr19:7886976-7887096	3	-	7886976	7886976	8553170	1	120,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	7886976	7887096	chr19:7886976-7887096	7	-	7886976	7886976	16724991	1	120,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	7888504	7902016	chr19:7888504-7902016	1	+	7895603	7900913	789624	3	96,143,3356,	0,7094,10156,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	7888504	7902021	chr19:7888504-7902021	3	+	7895603	7900913	789624	4	96,143,143,3361,	0,5212,7094,10156,
#Partially deleted in new
chr19	7888539	7899130	chr19:7888539-7899130	0	+	7898909	7899130	789624	2	61,470,	0,10121,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	7888550	7899084	chr19:7888550-7899084	0	+	7895603	7899084	789624	4	50,143,143,424,	0,5166,7048,10110,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	7893595	7898808	chr19:7893595-7898808	0	+	7895603	7898808	789624	3	264,143,148,	0,2003,5065,
#Partially deleted in new
chr19	7895133	7898933	chr19:7895133-7898933	0	+	7895603	7898933	789624	2	608,273,	0,3527,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	7898803	7903542	chr19:7898803-7903542	3	-	7898803	7898803	8553170	1	4739,	0,
#Partially deleted in new
chr19	7903842	7914478	chr19:7903842-7914478	1	+	7903944	7912431	0	11	226,142,67,114,120,108,180,81,164,46,2182,	0,5912,6220,6417,6610,6853,7137,7407,7572,8306,8454,
#Partially deleted in new
chr19	7903879	7912565	chr19:7903879-7912565	0	+	7903879	7903879	8553170	10	189,142,311,120,108,180,81,143,46,269,	0,5875,6183,6573,6816,7100,7370,7556,8269,8417,
#Partially deleted in new
chr19	7903884	7914459	chr19:7903884-7914459	1	+	7903944	7912431	0	12	184,48,142,67,114,120,108,180,81,143,46,2163,	0,1923,5870,6178,6375,6568,6811,7095,7365,7551,8264,8412,
#Partially deleted in new
chr19	7903890	7914478	chr19:7903890-7914478	3	+	7903944	7912431	0	11	178,142,67,114,120,108,180,81,143,46,2182,	0,5864,6172,6369,6562,6805,7089,7359,7545,8258,8406,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	7903906	7907066	chr19:7903906-7907066	0	+	7903906	7903906	8553170	3	162,98,1259,	0,544,1901,
#Deleted in new
chr19	7910075	7911105	chr19:7910075-7911105	0	+	7910075	7910075	8553170	3	54,544,126,	0,184,904,
#Deleted in new
chr19	7910213	7910735	chr19:7910213-7910735	0	+	7910213	7910213	8553170	2	359,40,	0,482,
#Deleted in new
chr19	7911098	7911356	chr19:7911098-7911356	0	+	7911098	7911098	8553170	2	61,107,	0,151,
#Deleted in new
chr19	7912647	7913518	chr19:7912647-7913518	3	-	7912647	7912647	8553170	2	262,176,	0,695,
#Partially deleted in new
chr19	7916144	7919097	chr19:7916144-7919097	3	+	7916267	7918124	789624	6	399,321,127,159,73,181,	0,477,1328,1556,1912,2772,
#Partially deleted in new
chr19	7916955	7919093	chr19:7916955-7919093	0	+	7916955	7916955	8553170	5	95,127,159,73,265,	0,517,745,1101,1873,
#Partially deleted in new
chr19	7917627	7919090	chr19:7917627-7919090	0	+	7917627	7917627	8553170	3	232,73,174,	0,429,1289,
#Deleted in new
chr19	7918651	7919157	chr19:7918651-7919157	3	-	7918651	7918651	8553170	1	506,	0,
#Deleted in new
chr19	7920315	7923250	chr19:7920315-7923250	3	+	7920366	7922764	789624	5	234,120,69,313,806,	0,1107,1389,1719,2129,
#Deleted in new
chr19	7920386	7922657	chr19:7920386-7922657	0	+	7920386	7922520	789624	4	163,120,69,623,	0,1036,1318,1648,
#Deleted in new
chr19	7920836	7921746	chr19:7920836-7921746	0	+	7920836	7920836	8553170	3	28,120,42,	0,586,868,
#Deleted in new
chr19	7921012	7922193	chr19:7921012-7922193	0	+	7921012	7921012	8553170	4	228,120,69,159,	0,410,692,1022,
#Deleted in new
chr19	7921014	7923250	chr19:7921014-7923250	1	+	7922470	7922764	789624	5	105,120,69,313,806,	0,408,690,1020,1430,
#Deleted in new
chr19	7921317	7922197	chr19:7921317-7922197	0	+	7921317	7921317	8553170	3	225,69,163,	0,387,717,
#Deleted in new
chr19	7924484	7926166	chr19:7924484-7926166	3	-	7925289	7925538	789624	2	1074,200,	0,1482,
#Deleted in new
chr19	7926000	7926763	chr19:7926000-7926763	3	+	7926000	7926000	8553170	2	126,191,	0,572,
#Deleted in new
chr19	7926222	7926810	chr19:7926222-7926810	0	+	7926222	7926222	8553170	1	588,	0,
#Deleted in new
chr19	7926717	7928944	chr19:7926717-7928944	0	-	7926717	7926717	8553170	1	2227,	0,
#Partially deleted in new
chr19	7926720	7932746	chr19:7926720-7932746	0	-	7927186	7932746	789624	4	586,111,51,120,	0,936,4417,5906,
#Partially deleted in new
chr19	7926735	7943635	chr19:7926735-7943635	0	-	7934238	7943635	789624	13	571,111,90,51,125,93,86,140,153,81,171,96,29,	0,921,1341,4402,5891,6104,6749,7128,7353,8329,11291,14366,16871,
#Partially deleted in new
chr19	7926739	7943920	chr19:7926739-7943920	3	-	7927186	7943651	0	13	567,111,90,51,125,93,86,140,150,81,171,96,314,	0,917,1337,4398,5887,6100,6745,7124,7349,8325,11287,14362,16867,
#Partially deleted in new
chr19	7926913	7931830	chr19:7926913-7931830	0	-	7926913	7926913	8553170	5	393,111,90,51,152,	0,743,1163,4224,4765,
#Partially deleted in new
chr19	7927048	7931599	chr19:7927048-7931599	0	-	7927048	7927048	8553170	4	258,111,90,462,	0,608,1028,4089,
#Partially deleted in new
chr19	7927823	7931381	chr19:7927823-7931381	0	-	7927823	7927823	8553170	2	343,244,	0,3314,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	7928122	7943667	chr19:7928122-7943667	0	-	7935145	7943651	789624	11	44,51,125,93,86,140,150,189,171,96,61,	0,3015,4504,4717,5362,5741,5966,6942,9904,12979,15484,
#Deleted in new
chr19	7932275	7933952	chr19:7932275-7933952	0	-	7932275	7932275	8553170	4	476,93,86,89,	0,564,1209,1588,
#Partially deleted in new
chr19	7932698	7943651	chr19:7932698-7943651	0	-	7932698	7943651	789624	8	53,93,86,140,150,81,171,45,	0,141,786,1165,1390,2366,5328,10908,
#Partially deleted in new
chr19	7933763	7943636	chr19:7933763-7943636	0	-	7933763	7933763	8553170	6	240,150,81,171,96,30,	0,325,1301,4263,7338,9843,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	7937797	7943666	chr19:7937797-7943666	0	-	7937797	7937797	8553170	3	400,96,60,	0,3304,5809,
#Partially deleted in new
chr19	7958578	8005608	chr19:7958578-8005608	3	-	7963482	7991815	0	6	5229,226,154,104,188,114,	0,8986,15146,22504,33065,46916,
#Deleted in new
chr19	7959122	7960012	chr19:7959122-7960012	3	+	7959122	7959122	8553170	2	406,122,	0,768,
#Partially deleted in new
chr19	7960916	7981112	chr19:7960916-7981112	0	-	7961394	7981112	789624	3	696,154,30,	0,12808,20166,
#Partially deleted in new
chr19	7963158	8002203	chr19:7963158-8002203	1	-	7963482	7991815	0	6	649,226,154,104,188,152,	0,4406,10566,17924,28485,38893,
#Partially deleted in new
chr19	7963629	8005659	chr19:7963629-8005659	1	-	7973593	7991815	789624	6	178,67,154,104,188,165,	0,9929,10095,17453,28014,41865,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	7972887	7973785	chr19:7972887-7973785	0	-	7972887	7972887	8553170	2	738,61,	0,837,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	8008728	8016025	chr19:8008728-8016025	3	+	8008728	8008728	8553170	2	48,373,	0,6924,
#Partially deleted in new
chr19	8052766	8062622	chr19:8052766-8062622	1	+	8053049	8062225	789624	6	56,123,118,134,117,405,	0,233,3385,3599,5037,9451,
#Partially deleted in new
chr19	8052999	8062646	chr19:8052999-8062646	3	+	8053049	8062225	789624	5	123,118,134,120,429,	0,3152,3366,4801,9218,
#Partially deleted in new
chr19	8053049	8057925	chr19:8053049-8057925	1	+	8053049	8057925	789624	4	73,118,134,125,	0,3102,3316,4751,
#Partially deleted in new
chr19	8053049	8062650	chr19:8053049-8062650	0	+	8053049	8057864	789624	4	73,118,120,433,	0,3102,4751,9168,
#Partially deleted in new
chr19	8065401	8149846	chr19:8065401-8149846	3	-	8065918	8147480	789624	64	859,151,235,120,129,117,123,126,207,126,135,123,120,126,66,153,126,120,129,117,126,126,126,72,150,126,126,69,162,123,123,126,123,123,126,126,123,126,126,129,126,225,126,51,138,120,126,126,54,276,123,126,120,144,183,153,126,198,96,96,99,83,184,398,	0,6646,7661,9669,9881,15601,15956,17845,19961,20798,21675,22423,22658,24143,24492,24697,26063,29044,29973,30562,31042,31479,31887,35499,37322,38160,40706,42768,43825,44229,45443,45656,46246,46575,50113,51272,51767,52062,53495,55856,58062,58382,60490,60895,61066,61311,63626,63838,65833,66152,67582,70559,70788,70986,72739,73010,76315,76538,79475,80441,80725,81702,81912,84047,
#Partially deleted in new
chr19	8065402	8147766	chr19:8065402-8147766	1	-	8065918	8147480	789624	63	858,151,235,120,129,117,123,126,207,126,135,123,120,126,66,153,126,120,129,117,126,126,126,72,150,126,126,69,162,123,123,126,123,123,126,126,123,126,126,129,126,225,126,51,138,120,126,126,54,276,123,126,120,144,183,153,126,198,96,96,99,83,453,	0,6645,7660,9668,9880,15600,15955,17844,19960,20797,21674,22422,22657,24142,24491,24696,26062,29043,29972,30561,31041,31478,31886,35498,37321,38159,40705,42767,43824,44228,45442,45655,46245,46574,50112,51271,51766,52061,53494,55855,58061,58381,60489,60894,61065,61310,63625,63837,65832,66151,67581,70558,70787,70985,72738,73009,76314,76537,79474,80440,80724,81701,81911,
#Partially deleted in new
chr19	8065402	8148869	chr19:8065402-8148869	1	-	8065918	8147480	789624	64	858,151,235,120,129,117,123,126,207,126,135,123,120,126,66,153,126,120,129,117,126,126,126,72,150,126,126,69,162,123,123,126,123,123,126,126,123,126,126,129,126,225,126,51,138,120,126,126,54,276,123,126,120,144,183,153,126,198,96,96,99,83,184,123,	0,6645,7660,9668,9880,15600,15955,17844,19960,20797,21674,22422,22657,24142,24491,24696,26062,29043,29972,30561,31041,31478,31886,35498,37321,38159,40705,42767,43824,44228,45442,45655,46245,46574,50112,51271,51766,52061,53494,55855,58061,58381,60489,60894,61065,61310,63625,63837,65832,66151,67581,70558,70787,70985,72738,73009,76314,76537,79474,80440,80724,81701,81911,83344,
#Partially deleted in new
chr19	8074765	8081056	chr19:8074765-8081056	0	-	8074765	8074765	8553170	2	425,54,	0,6237,
#Partially deleted in new
chr19	8087203	8090233	chr19:8087203-8090233	0	-	8087203	8090233	789624	5	8,123,120,126,135,	0,621,856,2341,2895,
#Partially deleted in new
chr19	8087824	8089977	chr19:8087824-8089977	0	-	8087824	8087824	8553170	4	123,120,126,84,	0,235,1720,2069,
#Partially deleted in new
chr19	8095378	8100968	chr19:8095378-8100968	0	-	8095378	8100968	789624	5	125,117,126,126,68,	0,585,1065,1502,5522,
#Deleted in new
chr19	8110887	8111806	chr19:8110887-8111806	0	-	8110887	8110887	8553170	3	80,126,159,	0,170,760,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	8173271	8175567	chr19:8173271-8175567	7	+	8173271	8173271	16724991	4	199,67,334,247,	0,807,1413,2049,
#Partially deleted in new
chr19	8206735	8254602	chr19:8206735-8254602	0	+	8251076	8254602	789624	4	64,157,206,104,	0,3970,44308,47763,
#Partially deleted in new
chr19	8209302	8255655	chr19:8209302-8255655	0	+	8251076	8255655	789624	5	192,180,174,118,49,	0,1380,41773,45196,46304,
#Partially deleted in new
chr19	8209312	8262421	chr19:8209312-8262421	1	+	8251229	8262109	789624	12	182,157,140,118,119,58,51,93,129,107,157,492,	0,1393,41797,45186,46294,46509,46923,47305,47636,48566,52375,52617,
#Partially deleted in new
chr19	8209325	8255724	chr19:8209325-8255724	0	+	8251076	8255724	789624	5	169,157,206,118,118,	0,1380,41718,45173,46281,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	8209339	8241370	chr19:8209339-8241370	0	+	8209339	8209339	8553170	4	155,157,78,30,	0,1366,31146,32001,
#Partially deleted in new
chr19	8209352	8262421	chr19:8209352-8262421	3	+	8251076	8262109	789624	12	142,157,174,118,119,58,51,93,129,107,157,492,	0,1353,41723,45146,46254,46469,46883,47265,47596,48526,52335,52577,
#Partially deleted in new
chr19	8209355	8262421	chr19:8209355-8262421	1	+	8251076	8262109	789624	11	139,174,118,119,58,51,93,129,107,157,492,	0,41720,45143,46251,46466,46880,47262,47593,48523,52332,52574,
#Partially deleted in new
chr19	8209370	8262421	chr19:8209370-8262421	1	+	8251076	8262109	789624	10	124,157,174,118,119,58,51,93,129,492,	0,1335,41705,45128,46236,46451,46865,47247,47578,52559,
#Partially deleted in new
chr19	8209375	8214529	chr19:8209375-8214529	0	+	8209375	8209375	8553170	3	119,157,164,	0,1330,4990,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	8209382	8262421	chr19:8209382-8262421	0	+	8209382	8209382	8553170	13	112,157,116,117,118,119,58,51,93,129,107,157,492,	0,1323,4983,31958,45116,46224,46439,46853,47235,47566,48496,52305,52547,
#Partially deleted in new
chr19	8209430	8257161	chr19:8209430-8257161	0	+	8209430	8209430	8553170	8	64,157,118,119,58,51,93,213,	0,1275,45068,46176,46391,46805,47187,47518,
#Partially deleted in new
chr19	8209633	8251171	chr19:8209633-8251171	0	+	8251076	8251171	789624	3	315,157,96,	0,1072,41442,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	8222152	8239648	chr19:8222152-8239648	3	-	8222152	8222152	8553170	2	57,291,	0,17205,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	8225026	8256675	chr19:8225026-8256675	0	+	8251076	8256675	789624	8	63,117,174,118,119,58,51,58,	0,16314,26049,29472,30580,30795,31209,31591,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	8250525	8262418	chr19:8250525-8262418	0	+	8250525	8250525	8553170	9	724,118,119,465,93,129,107,157,489,	0,3973,5081,5296,6092,6423,7353,11162,11404,
#Partially deleted in new
chr19	8260996	8261779	chr19:8260996-8261779	0	+	8260996	8260996	8553170	2	337,92,	0,691,
#Partially deleted in new
chr19	8261626	8262421	chr19:8261626-8262421	0	+	8261626	8261626	8553170	2	218,492,	0,303,
#Partially deleted in new
chr19	8302126	8308355	chr19:8302126-8308355	3	-	8302462	8308290	0	5	479,204,234,126,207,	0,650,1728,2904,6022,
#Partially deleted in new
chr19	8302126	8308350	chr19:8302126-8308350	1	-	8302462	8308290	0	4	479,204,234,202,	0,650,1728,6022,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	8302126	8308300	chr19:8302126-8308300	0	-	8305701	8308290	789624	5	479,204,119,775,152,	0,650,1728,2904,6022,
#Partially deleted in new
chr19	8302316	8308271	chr19:8302316-8308271	0	-	8303956	8308271	789624	5	289,204,119,126,123,	0,460,1538,2714,5832,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	8304766	8308335	chr19:8304766-8308335	0	-	8304766	8304766	8553170	2	390,187,	0,3382,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	8305634	8308356	chr19:8305634-8308356	0	-	8305634	8305634	8553170	2	284,208,	0,2514,
#Partially deleted in new
chr19	8308282	8321379	chr19:8308282-8321379	3	-	8311504	8321358	8553170	5	124,184,150,50,72,	0,3129,8213,12574,13025,
#Partially deleted in new
chr19	8308767	8321375	chr19:8308767-8321375	0	-	8311504	8321358	0	5	117,184,150,50,68,	0,2644,7728,12089,12540,
#Partially deleted in new
chr19	8308772	8321375	chr19:8308772-8321375	0	-	8311504	8321358	789624	4	112,184,50,68,	0,2639,12084,12535,
#Duplicated in new
chr19	8311283	8321396	chr19:8311283-8321396	3	-	8311504	8321358	0	4	312,150,50,89,	0,5212,9573,10024,
#Partially deleted in new
chr19	8311365	8316812	chr19:8311365-8316812	0	-	8311365	8311365	8553170	2	230,317,	0,5130,
#Deleted in new
chr19	8321157	8322946	chr19:8321157-8322946	0	+	8321157	8321157	8553170	3	412,436,675,	0,498,1114,
#Deleted in new
chr19	8321494	8322492	chr19:8321494-8322492	0	+	8321494	8321494	8553170	2	75,837,	0,161,
#Deleted in new
chr19	8321499	8323340	chr19:8321499-8323340	3	+	8321530	8322075	0	4	70,48,139,1069,	0,156,453,772,
#Deleted in new
chr19	8321633	8322396	chr19:8321633-8322396	0	+	8321633	8321633	8553170	3	70,139,125,	0,319,638,
#Partially deleted in new
chr19	8322583	8343262	chr19:8322583-8343262	3	-	8322838	8337828	789624	11	339,99,201,146,217,85,207,100,1293,62,38,	0,1865,2046,2367,10430,11140,11326,11736,11916,15211,20641,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	8323314	8343262	chr19:8323314-8343262	1	-	8323397	8337828	789624	11	224,99,201,146,217,85,207,100,1293,62,38,	0,1134,1315,1636,9699,10409,10595,11005,11185,14480,19910,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	8332744	8334430	chr19:8332744-8334430	1	-	8332944	8334078	789624	4	245,240,12,694,	0,246,979,992,
#Partially deleted in new
chr19	8333216	8343262	chr19:8333216-8343262	0	-	8333216	8337828	789624	6	14,85,207,100,62,38,	0,507,693,1103,4578,10008,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	8334112	8334782	chr19:8334112-8334782	0	-	8334112	8334112	8553170	2	307,283,	0,387,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	8346516	8347687	chr19:8346516-8347687	7	+	8346516	8346516	16724991	3	298,229,67,	0,588,1104,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	8363288	8364609	chr19:8363288-8364609	0	+	8364321	8364609	789624	3	74,74,404,	0,488,917,
#Partially deleted in new
chr19	8363298	8371230	chr19:8363298-8371230	0	+	8363298	8363298	8553170	5	64,111,118,114,175,	0,2655,2903,5920,7757,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	8363298	8364635	chr19:8363298-8364635	0	+	8364321	8364635	789624	3	64,77,430,	0,475,907,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	8363410	8364578	chr19:8363410-8364578	0	+	8364321	8364578	789624	2	440,373,	0,795,
#Partially deleted in new
chr19	8364150	8374373	chr19:8364150-8374373	3	+	8364321	8373886	0	7	489,111,118,114,96,282,669,	0,1803,2051,5068,6905,7090,9554,
#Partially deleted in new
chr19	8364155	8374288	chr19:8364155-8374288	0	+	8364321	8366229	789624	8	396,18,111,118,114,96,282,584,	0,466,1798,2046,5063,6900,7085,9549,
#Partially deleted in new
chr19	8364165	8371261	chr19:8364165-8371261	0	+	8364165	8364165	8553170	4	474,111,118,206,	0,1788,2036,6890,
#Partially deleted in new
chr19	8364168	8374331	chr19:8364168-8374331	1	+	8364321	8373886	0	6	471,111,118,96,282,627,	0,1785,2033,6887,7072,9536,
#Partially deleted in new
chr19	8364168	8374370	chr19:8364168-8374370	0	+	8364321	8373886	0	8	471,111,118,114,96,282,251,355,	0,1785,2033,5050,6887,7072,9536,9847,
#Partially deleted in new
chr19	8364168	8371262	chr19:8364168-8371262	0	+	8364168	8364168	8553170	5	471,111,118,114,207,	0,1785,2033,5050,6887,
#Partially deleted in new
chr19	8364397	8374370	chr19:8364397-8374370	0	+	8364397	8374228	789624	3	242,111,178,	0,1556,9795,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	8374372	8390124	chr19:8374372-8390124	0	-	8374372	8374372	8553170	3	236,163,116,	0,2532,15636,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	8374378	8390685	chr19:8374378-8390685	3	-	8374378	8374378	789624	3	230,106,677,	0,2583,15630,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	8374420	8377827	chr19:8374420-8377827	0	-	8374420	8374420	8553170	3	188,106,80,	0,2541,3327,
#Deleted in new
chr19	8389289	8389380	chr19:8389289-8389380	3	-	8389289	8389289	5263520	1	91,	0,
#Partially deleted in new
chr19	8389980	8402550	chr19:8389980-8402550	0	+	8402206	8402550	789624	4	76,196,194,66,	0,9882,12105,12504,
#Partially deleted in new
chr19	8390198	8404434	chr19:8390198-8404434	3	+	8390416	8403558	0	5	258,196,194,81,1022,	0,9664,11887,12286,13214,
#Partially deleted in new
chr19	8390362	8400342	chr19:8390362-8400342	0	+	8390362	8390362	8553170	2	94,480,	0,9500,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	8390388	8402799	chr19:8390388-8402799	1	+	8402206	8402594	789624	3	68,194,315,	0,11697,12096,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	8390392	8402924	chr19:8390392-8402924	1	+	8390416	8402594	0	4	64,196,194,440,	0,9470,11693,12092,
#Partially deleted in new
chr19	8413269	8439004	chr19:8413269-8439004	1	+	8421840	8438546	789624	4	151,228,196,617,	0,8519,13339,25118,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	8413289	8426668	chr19:8413289-8426668	0	+	8421840	8426668	789624	4	131,271,228,60,	0,5247,8499,13319,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	8413294	8426673	chr19:8413294-8426673	0	+	8421840	8426673	789624	4	126,66,228,65,	0,5447,8494,13314,
#Partially deleted in new
chr19	8413302	8439011	chr19:8413302-8439011	3	+	8421840	8438546	789624	5	118,228,196,210,624,	0,8486,13306,17355,25085,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	8413304	8438731	chr19:8413304-8438731	1	+	8421840	8438546	789624	4	116,271,163,197,	0,5232,8484,25230,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	8413421	8422009	chr19:8413421-8422009	0	+	8421840	8422009	789624	3	373,271,221,	0,5115,8367,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	8418404	8439017	chr19:8418404-8439017	1	+	8421840	8438546	789624	5	403,228,196,210,630,	0,3384,8204,12253,19983,
#Partially deleted in new
chr19	8421926	8430892	chr19:8421926-8430892	0	+	8421926	8421926	8553170	3	90,196,235,	0,4682,8731,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	8423354	8427827	chr19:8423354-8427827	3	-	8423354	8423354	8553170	2	385,126,	0,4347,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	8444569	8445597	chr19:8444569-8445597	3	-	8444569	8444569	8553170	1	1028,	0,
#Partially deleted in new
chr19	8444766	8489114	chr19:8444766-8489114	1	+	8444998	8488854	0	17	345,170,53,8,94,39,36,154,50,61,102,45,78,54,803,52,424,	0,10638,17762,18730,18826,20557,20713,21468,22768,24007,26559,28897,29400,38391,40836,42257,43924,
#Partially deleted in new
chr19	8444919	8463852	chr19:8444919-8463852	0	+	8444919	8444919	8553170	4	192,170,8,260,	0,10485,18577,18673,
#Partially deleted in new
chr19	8444957	8489114	chr19:8444957-8489114	3	+	8444998	8488854	0	16	154,170,53,8,94,192,154,50,61,102,45,78,54,803,52,424,	0,10447,17571,18539,18635,20366,21277,22577,23816,26368,28706,29209,38200,40645,42066,43733,
#Partially deleted in new
chr19	8444970	8485648	chr19:8444970-8485648	0	+	8444998	8485648	789624	14	141,170,53,8,94,39,36,154,50,61,102,78,54,46,	0,10434,17558,18526,18622,20353,20509,21264,22564,23803,26355,29196,38187,40632,
#Partially deleted in new
chr19	8444976	8489110	chr19:8444976-8489110	0	+	8444998	8463601	789624	14	135,170,8,94,192,154,50,61,102,78,54,803,52,420,	0,10428,18520,18616,20347,21258,22558,23797,26349,29190,38181,40626,42047,43714,
#Partially deleted in new
chr19	8444989	8489110	chr19:8444989-8489110	1	+	8444998	8488854	789624	15	122,170,61,94,192,154,50,61,102,45,78,54,803,52,420,	0,10415,17539,18603,20334,21245,22545,23784,26336,28674,29177,38168,40613,42034,43701,
#Partially deleted in new
chr19	8444991	8485724	chr19:8444991-8485724	0	+	8444998	8485724	789624	11	120,170,53,8,94,192,154,50,61,54,122,	0,10413,17537,18505,18601,20332,21243,22543,23782,38166,40611,
#Partially deleted in new
chr19	8444992	8467582	chr19:8444992-8467582	0	+	8444998	8467582	789624	8	119,170,4,94,39,36,154,48,	0,10412,18504,18600,20331,20487,21242,22542,
#Partially deleted in new
chr19	8444993	8471410	chr19:8444993-8471410	0	+	8444998	8471410	789624	10	118,170,53,8,94,39,154,50,61,85,	0,10411,17535,18503,18599,20330,21241,22541,23780,26332,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	8461968	8465372	chr19:8461968-8465372	0	+	8461968	8461968	8553170	4	613,8,94,49,	0,1528,1624,3355,
#Partially deleted in new
chr19	8463496	8474244	chr19:8463496-8474244	0	+	8463496	8474244	789624	6	8,46,19,102,45,78,	0,96,5319,7829,10167,10670,
#Partially deleted in new
chr19	8466248	8486273	chr19:8466248-8486273	0	+	8466248	8486273	789624	7	140,50,61,102,45,78,671,	0,1286,2525,5077,7415,7918,19354,
#Partially deleted in new
chr19	8481468	8487082	chr19:8481468-8487082	0	+	8481468	8481468	8553170	4	88,54,803,59,	0,1689,4134,5555,
#Partially deleted in new
chr19	8482548	8485723	chr19:8482548-8485723	0	+	8482548	8482548	8553170	2	663,121,	0,3054,
#Deleted in new
chr19	8485861	8488946	chr19:8485861-8488946	0	+	8485861	8488055	789624	4	544,52,58,256,	0,1162,2147,2829,
#Deleted in new
chr19	8486157	8487184	chr19:8486157-8487184	0	+	8486157	8487125	789624	2	248,161,	0,866,
#Deleted in new
chr19	8487301	8489110	chr19:8487301-8489110	0	+	8487301	8487301	8553170	1	1809,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	8490055	8503112	chr19:8490055-8503112	3	-	8490188	8502591	789624	10	171,35,34,163,109,58,77,67,1405,548,	0,282,420,538,831,1044,7708,8167,8320,12509,
#Deleted in new
chr19	8490055	8490875	chr19:8490055-8490875	0	-	8490055	8490055	8553170	3	317,34,282,	0,420,538,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	8490084	8492023	chr19:8490084-8492023	0	-	8490084	8490084	8553170	6	142,35,34,163,109,924,	0,253,391,509,802,1015,
#Partially deleted in new
chr19	8499195	8502634	chr19:8499195-8502634	0	-	8499195	8502591	789624	3	279,234,70,	0,351,3369,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	8509677	8514160	chr19:8509677-8514160	3	-	8510690	8514046	789624	8	1087,174,51,344,106,108,313,117,	0,1173,1808,1939,2709,2926,3351,4366,
#Deleted in new
chr19	8510579	8511699	chr19:8510579-8511699	0	-	8510797	8511699	789624	3	445,51,83,	0,906,1037,
#Deleted in new
chr19	8510977	8512399	chr19:8510977-8512399	0	-	8510977	8512399	789624	5	47,51,344,57,13,	0,508,639,1097,1409,
#Deleted in new
chr19	8510977	8511806	chr19:8510977-8511806	0	-	8510977	8510977	8553170	2	47,321,	0,508,
#Deleted in new
chr19	8510995	8512414	chr19:8510995-8512414	0	-	8510995	8512414	789624	4	29,61,344,28,	0,480,621,1391,
#Partially deleted in new
chr19	8511334	8514148	chr19:8511334-8514148	1	-	8511471	8514046	789624	6	202,344,106,108,313,105,	0,282,1052,1269,1694,2709,
#Deleted in new
chr19	8511484	8512007	chr19:8511484-8512007	0	-	8511484	8511484	8553170	2	52,391,	0,132,
#Partially deleted in new
chr19	8511866	8514153	chr19:8511866-8514153	0	-	8512465	8514046	789624	4	94,106,108,110,	0,520,737,2177,
#Partially deleted in new
chr19	8512995	8514164	chr19:8512995-8514164	0	-	8512995	8512995	8553170	2	346,121,	0,1048,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr19	8520789	8577577	chr19:8520789-8577577	3	-	8521527	8577309	789624	28	815,170,196,84,149,147,146,170,115,145,99,107,82,86,168,87,87,81,197,133,135,132,90,88,95,90,138,271,	0,1587,1844,4689,5663,5999,6548,9406,9669,15462,15709,16159,19157,21116,23507,24860,27246,27447,29370,29772,30950,31243,32349,32560,33687,33864,34869,56517,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr19	8520796	8577577	chr19:8520796-8577577	1	-	8521527	8577309	789624	29	808,170,196,84,149,147,146,170,115,145,99,107,82,86,168,87,87,81,6,191,133,135,132,90,88,95,90,138,271,	0,1580,1837,4682,5656,5992,6541,9399,9662,15455,15702,16152,19150,21109,23500,24853,27239,27440,28798,29369,29765,30943,31236,32342,32553,33680,33857,34862,56510,
#Partially deleted in new
chr19	8521111	8577442	chr19:8521111-8577442	1	-	8521527	8577309	789624	28	493,170,196,84,149,147,146,170,115,145,99,107,82,86,168,87,87,81,197,133,135,132,90,88,95,90,138,136,	0,1265,1522,4367,5341,5677,6226,9084,9347,15140,15387,15837,18835,20794,23185,24538,26924,27125,29048,29450,30628,30921,32027,32238,33365,33542,34547,56195,
#Partially deleted in new
chr19	8522809	8527387	chr19:8522809-8527387	0	-	8522809	8522809	8553170	4	20,84,483,50,	0,2669,3643,4528,
#Partially deleted in new
chr19	8525225	8526622	chr19:8525225-8526622	0	-	8525225	8525225	8553170	2	337,170,	0,1227,
#Deleted in new
chr19	8529808	8530462	chr19:8529808-8530462	0	-	8529808	8529808	8553170	3	189,291,4,	0,266,650,
#Deleted in new
chr19	8530039	8530484	chr19:8530039-8530484	0	-	8530039	8530039	8553170	2	326,26,	0,419,
#Partially deleted in new
chr19	8530195	8540052	chr19:8530195-8540052	0	-	8530195	8530195	8553170	6	170,115,145,99,107,106,	0,263,6056,6303,6753,9751,
#Partially deleted in new
chr19	8530481	8541956	chr19:8530481-8541956	0	-	8530481	8530481	8553170	6	92,145,148,107,82,44,	0,5770,6017,6467,9465,11431,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	8540318	8548043	chr19:8540318-8548043	0	-	8541901	8548043	789624	5	145,264,168,87,8,	0,1409,3978,5331,7717,
#Partially deleted in new
chr19	8544067	8545718	chr19:8544067-8545718	0	-	8544067	8544067	8553170	2	397,69,	0,1582,
#Partially deleted in new
chr19	8545442	8552036	chr19:8545442-8552036	0	-	8545442	8545442	8553170	7	294,87,81,197,133,135,4,	0,2593,2794,4717,5119,6297,6590,
#Partially deleted in new
chr19	8547853	8550332	chr19:8547853-8550332	0	-	8547853	8547853	8553170	3	269,81,173,	0,383,2306,
#Partially deleted in new
chr19	8548297	8550413	chr19:8548297-8550413	0	-	8548297	8548297	8553170	2	20,254,	0,1862,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	8549505	8550139	chr19:8549505-8550139	3	+	8549505	8549505	8553170	2	77,220,	0,414,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	8549579	8550656	chr19:8549579-8550656	0	-	8549579	8549579	8553170	2	777,95,	0,982,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	8551422	8554564	chr19:8551422-8554564	0	-	8551422	8551422	8553170	5	452,132,90,88,88,	0,610,1716,1927,3054,
#Partially deleted in new
chr19	8551665	8577438	chr19:8551665-8577438	0	-	8551665	8551665	8553170	7	499,90,88,95,90,138,132,	0,1473,1684,2811,2988,3993,25641,
#Partially deleted in new
chr19	8551829	8577438	chr19:8551829-8577438	0	-	8551829	8551829	8553170	7	45,132,299,95,90,138,132,	0,203,1309,2647,2824,3829,25477,
#Partially deleted in new
chr19	8553211	8577438	chr19:8553211-8577438	0	-	8554675	8577309	789624	6	17,88,95,90,160,132,	0,138,1265,1442,2425,24095,
#Partially deleted in new
chr19	8553221	8555777	chr19:8553221-8555777	0	-	8553221	8553221	8553170	4	7,88,267,119,	0,128,1255,2437,
#Partially deleted in new
chr19	8553349	8577438	chr19:8553349-8577438	0	-	8553349	8577309	789624	5	88,95,48,168,132,	0,1127,1304,2279,23957,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	8555391	8577433	chr19:8555391-8577433	0	-	8555391	8555391	8553170	2	405,127,	0,21915,
#Deleted in new
chr19	8576441	8577442	chr19:8576441-8577442	0	-	8576441	8576441	8553170	1	1001,	0,
#Partially deleted in new
chr19	8580241	8608265	chr19:8580241-8608265	1	-	8580892	8605710	789624	25	761,160,177,205,130,127,164,81,124,134,103,64,146,108,142,147,106,44,146,84,218,157,347,187,132,	0,4653,4890,5214,5880,6102,6316,6574,9000,9210,9647,11558,11716,12521,15520,15831,16065,16300,16745,16992,20686,23486,24770,25381,27892,
#Partially deleted in new
chr19	8580241	8592196	chr19:8580241-8592196	1	-	8580892	8592162	789624	13	761,160,177,205,130,127,164,81,124,123,103,64,239,	0,4653,4890,5214,5880,6102,6316,6574,9000,9210,9647,11558,11716,
#Partially deleted in new
chr19	8580687	8605779	chr19:8580687-8605779	0	-	8597262	8605710	789624	22	315,160,177,205,130,127,164,81,124,134,103,64,146,108,131,147,49,89,218,157,347,157,	0,4207,4444,4768,5434,5656,5870,6128,8554,8764,9201,11112,11270,12075,15085,15385,16396,16546,20240,23040,24324,24935,
#Partially deleted in new
chr19	8580726	8610700	chr19:8580726-8610700	3	-	8580892	8605710	789624	26	276,160,177,205,130,127,164,81,124,134,103,64,146,108,142,147,106,44,146,84,218,157,347,187,115,57,	0,4168,4405,4729,5395,5617,5831,6089,8515,8725,9162,11073,11231,12036,15035,15346,15580,15815,16260,16507,20201,23001,24285,24896,27407,29917,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	8581159	8582715	chr19:8581159-8582715	3	+	8581159	8581159	8553170	2	210,178,	0,1378,
#Partially deleted in new
chr19	8584962	8610681	chr19:8584962-8610681	0	-	8597262	8605710	789624	23	92,529,130,127,164,81,124,134,103,64,146,108,142,147,106,44,146,89,218,157,347,187,38,	0,169,1159,1381,1595,1853,4279,4489,4926,6837,6995,7800,10799,11110,11344,11579,12024,12271,15965,18765,20049,20660,25681,
#Partially deleted in new
chr19	8586621	8589691	chr19:8586621-8589691	0	-	8586621	8586621	8553170	4	100,81,124,240,	0,194,2620,2830,
#Partially deleted in new
chr19	8586655	8592216	chr19:8586655-8592216	0	-	8589576	8592162	789624	7	66,81,124,134,103,64,259,	0,160,2586,2796,3233,5144,5302,
#Partially deleted in new
chr19	8589800	8592174	chr19:8589800-8592174	0	-	8589800	8589800	8553170	3	191,64,217,	0,1999,2157,
#Partially deleted in new
chr19	8589940	8593516	chr19:8589940-8593516	0	-	8589940	8589940	8553170	4	51,64,146,754,	0,1859,2017,2822,
#Deleted in new
chr19	8591799	8597322	chr19:8591799-8597322	0	-	8591799	8591799	8553170	8	64,146,108,142,340,44,146,89,	0,158,963,3962,4273,4742,5187,5434,
#Deleted in new
chr19	8595612	8596357	chr19:8595612-8596357	0	-	8595612	8595612	8553170	2	291,285,	0,460,
#Partially deleted in new
chr19	8597236	8610700	chr19:8597236-8610700	0	-	8597236	8597236	8553170	6	86,218,157,347,115,57,	0,3691,6491,7775,10897,13407,
#Partially deleted in new
chr19	8597245	8610680	chr19:8597245-8610680	0	-	8597245	8597245	8553170	5	77,218,157,347,37,	0,3682,6482,7766,13398,
#Partially deleted in new
chr19	8604935	8610735	chr19:8604935-8610735	0	-	8604935	8604935	8553170	3	423,115,92,	0,3198,5708,
#Deleted in new
chr19	8676843	8677584	chr19:8676843-8677584	7	+	8676843	8676843	16724991	2	225,50,	0,691,
#Deleted in new
chr19	8695720	8696321	chr19:8695720-8696321	3	-	8695720	8695720	8553170	1	601,	0,
#Deleted in new
chr19	8697396	8698822	chr19:8697396-8698822	3	-	8697450	8698701	789624	1	1426,	0,
#Deleted in new
chr19	8697453	8698705	chr19:8697453-8698705	1	-	8697453	8698701	789624	1	1252,	0,
#Partially deleted in new
chr19	8721633	8732160	chr19:8721633-8732160	3	+	8731028	8731973	789624	3	409,45,1301,	0,1472,9226,
#Partially deleted in new
chr19	8728734	8729204	chr19:8728734-8729204	7	-	8728734	8728734	16724991	1	470,	0,
#Deleted in new
chr19	8730953	8732009	chr19:8730953-8732009	1	+	8731028	8731973	789624	1	1056,	0,
#Deleted in new
chr19	8778664	8778861	chr19:8778664-8778861	7	-	8778664	8778664	16724991	1	197,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	8806169	8832328	chr19:8806169-8832328	3	-	8811280	8822659	789624	10	5894,83,96,127,89,96,336,107,84,120,	0,6391,6957,15010,15833,16459,17912,18832,25148,26039,
#Partially deleted in new
chr19	8809705	8822889	chr19:8809705-8822889	1	-	8811280	8822659	789624	6	2358,83,96,127,89,261,	0,2855,3421,11474,12297,12923,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	8810937	8825099	chr19:8810937-8825099	0	-	8810937	8810937	8553170	8	1126,83,96,127,650,96,336,98,	0,1623,2189,10242,10504,11691,13144,14064,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	8821500	8824110	chr19:8821500-8824110	3	+	8821500	8821500	8553170	2	185,352,	0,2258,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	8822707	8832314	chr19:8822707-8832314	0	-	8822707	8822707	8553170	5	17,336,107,84,236,	0,1374,2294,8610,9371,
#Partially deleted in new
chr19	8831143	8832242	chr19:8831143-8832242	0	-	8831143	8831143	8553170	2	258,34,	0,1065,
#Partially deleted in new
chr19	8832397	8843319	chr19:8832397-8843319	3	+	8842678	8843263	789624	3	125,85,662,	0,8517,10260,
#Deleted in new
chr19	8833064	8833541	chr19:8833064-8833541	3	+	8833064	8833064	8553170	1	477,	0,
#Deleted in new
chr19	8842592	8843340	chr19:8842592-8843340	1	+	8842678	8843263	789624	1	748,	0,
#Partially deleted in new
chr19	8848843	8981342	chr19:8848843-8981342	3	-	8848931	8981138	789624	84	187,80,42,167,68,152,149,68,131,173,68,122,51,36,173,68,125,36,173,68,122,66,36,173,68,125,66,36,173,68,125,66,36,173,68,125,66,36,173,68,125,66,36,173,68,125,66,36,173,68,125,66,36,173,68,125,63,36,173,68,125,66,36,173,68,131,66,36,173,68,125,66,36,173,68,128,60,36,36,4680,114,21693,105,9679,	0,2432,2834,7130,9360,9756,12156,14029,14452,16740,17061,17219,18120,19697,22637,27525,27690,33487,33853,34622,34897,36115,36434,36801,37598,37892,39178,39505,39872,40627,40922,42311,42633,42981,43773,44046,45349,45674,46039,46824,47122,47967,48289,48653,49747,50068,51128,51451,51802,52948,53254,54325,54649,55012,55798,56101,57140,57461,57826,58613,58917,59755,60080,60465,61245,61534,64614,64941,65306,66071,66671,67696,68020,68704,73711,74090,78557,78860,83906,86044,94715,96653,120931,122820,
#Partially deleted in new
chr19	8848844	8891997	chr19:8848844-8891997	0	-	8862905	8891997	789624	28	186,80,42,167,68,152,149,68,173,68,125,36,173,68,122,66,36,173,68,125,66,36,173,68,125,66,36,173,	0,2431,2833,7129,9359,9755,12155,14028,22636,27524,27689,33486,33852,34621,34896,36114,36433,36800,37597,37891,39177,39504,39871,40626,40921,42310,42632,42980,
#Partially deleted in new
chr19	8848844	8896090	chr19:8848844-8896090	0	-	8848931	8896090	789624	40	186,80,42,167,68,152,149,68,131,173,68,122,36,173,68,125,36,173,68,122,66,36,173,68,125,66,36,173,68,125,66,36,173,68,125,66,36,173,68,125,	0,2431,2833,7129,9359,9755,12155,14028,14451,16739,17060,17218,19696,22636,27524,27689,33486,33852,34621,34896,36114,36433,36800,37597,37891,39177,39504,39871,40626,40921,42310,42632,42980,43772,44045,45348,45673,46038,46823,47121,
#Partially deleted in new
chr19	8848844	8896090	chr19:8848844-8896090	0	-	8856069	8896090	789624	40	186,80,42,167,68,166,149,68,131,173,68,122,51,36,173,68,125,36,173,68,122,36,173,68,125,66,36,173,68,125,66,36,173,68,125,66,36,173,68,125,	0,2431,2833,7129,9359,9741,12155,14028,14451,16739,17060,17218,18119,19696,22636,27524,27689,33486,33852,34621,34896,36433,36800,37597,37891,39177,39504,39871,40626,40921,42310,42632,42980,43772,44045,45348,45673,46038,46823,47121,
#Partially deleted in new
chr19	8863315	8867014	chr19:8863315-8867014	0	-	8863315	8863315	8553170	4	111,68,122,51,	0,2589,2747,3648,
#Partially deleted in new
chr19	9019343	9019984	chr19:9019343-9019984	7	+	9019343	9019343	16724991	2	125,198,	0,443,
#Partially deleted in new
chr19	9083111	9083398	chr19:9083111-9083398	7	-	9083111	9083111	16724991	1	287,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	9087060	9095669	chr19:9087060-9095669	3	+	9093244	9094186	789624	2	97,2438,	0,6171,
#Deleted in new
chr19	9093178	9094213	chr19:9093178-9094213	1	+	9093244	9094186	789624	1	1035,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	9100406	9107475	chr19:9100406-9107475	1	-	9102268	9103243	789624	2	2853,162,	0,6907,
#Partially deleted in new
chr19	9102268	9103306	chr19:9102268-9103306	3	-	9102268	9103306	789624	1	1038,	0,
#Partially deleted in new
chr19	9114827	9115763	chr19:9114827-9115763	3	-	9114827	9115763	789624	1	936,	0,
#Deleted in new
chr19	9122159	9122492	chr19:9122159-9122492	7	-	9122159	9122159	16724991	1	333,	0,
#Partially deleted in new
chr19	9126011	9126950	chr19:9126011-9126950	3	-	9126011	9126950	789624	1	939,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	9140379	9163413	chr19:9140379-9163413	3	+	9156016	9161433	789624	7	213,117,137,127,96,83,3300,	0,15545,16232,16888,17600,18446,19734,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	9140396	9163408	chr19:9140396-9163408	1	+	9156016	9161433	789624	6	196,117,137,127,83,3295,	0,15528,16215,16871,18429,19717,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	9140414	9163415	chr19:9140414-9163415	0	+	9156016	9157865	789624	7	178,117,137,127,242,83,3302,	0,15510,16197,16853,17419,18411,19699,
#Partially deleted in new
chr19	9140428	9157710	chr19:9140428-9157710	0	+	9140428	9140428	8553170	3	164,137,443,	0,16183,16839,
#Partially deleted in new
chr19	9156011	9161433	chr19:9156011-9161433	0	+	9156011	9156011	8553170	5	30,783,96,83,1320,	0,600,1968,2814,4102,
#Partially deleted in new
chr19	9158071	9163424	chr19:9158071-9163424	0	+	9158071	9163102	789624	3	4,83,370,	0,754,4983,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	9178978	9188780	chr19:9178978-9188780	1	+	9185781	9186720	789624	3	145,91,3012,	0,1719,6790,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	9178978	9188780	chr19:9178978-9188780	3	+	9185781	9186720	789624	2	145,3012,	0,6790,
#Partially deleted in new
chr19	9182368	9183048	chr19:9182368-9183048	7	-	9182368	9182368	16724991	2	115,219,	0,461,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	9185593	9188817	chr19:9185593-9188817	1	+	9185781	9186720	789624	1	3224,	0,
#Deleted in new
chr19	9191285	9192170	chr19:9191285-9192170	7	+	9191285	9191285	16724991	1	885,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	9198353	9210067	chr19:9198353-9210067	7	+	9198353	9198353	16724991	2	170,5767,	0,5947,
#Deleted in new
chr19	9204304	9205235	chr19:9204304-9205235	5	+	9204304	9204304	16724991	1	931,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	9210275	9219589	chr19:9210275-9219589	1	-	9213898	9214837	789624	2	4578,390,	0,8924,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	9210275	9219589	chr19:9210275-9219589	3	-	9213898	9214837	789624	2	4575,390,	0,8924,
#Deleted in new
chr19	9213849	9214871	chr19:9213849-9214871	1	-	9213898	9214837	789624	1	1022,	0,
#Deleted in new
chr19	9235143	9236076	chr19:9235143-9236076	7	+	9235143	9235143	16724991	1	933,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	9247343	9252625	chr19:9247343-9252625	3	+	9247488	9252063	789624	2	174,1541,	0,3741,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	9250929	9252479	chr19:9250929-9252479	1	+	9251043	9252063	789624	1	1550,	0,
#Deleted in new
chr19	9261014	9261716	chr19:9261014-9261716	7	-	9261014	9261014	16724991	1	702,	0,
#Partially deleted in new
chr19	9265439	9266283	chr19:9265439-9266283	5	-	9265439	9265439	16724991	1	844,	0,
#Partially deleted in new
chr19	9265473	9268819	chr19:9265473-9268819	7	-	9265473	9265473	16724991	2	855,79,	0,3267,
#Deleted in new
chr19	9278447	9279369	chr19:9278447-9279369	7	-	9278447	9278447	16724991	1	922,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	9291514	9294482	chr19:9291514-9294482	3	+	9291514	9291514	8553170	2	239,166,	0,2802,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	9294274	9309573	chr19:9294274-9309573	3	-	9295474	9305119	789624	6	2659,184,111,127,53,224,	0,3021,3605,8103,10797,15075,
#Partially deleted in new
chr19	9295309	9305119	chr19:9295309-9305119	1	-	9295474	9305119	789624	5	1624,184,111,127,48,	0,1986,2570,7068,9762,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	9302462	9309838	chr19:9302462-9309838	0	-	9302462	9302462	8553170	2	42,489,	0,6887,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	9323771	9343843	chr19:9323771-9343843	1	+	9324178	9343068	789624	6	457,86,89,127,83,2149,	0,923,14722,15421,17330,17923,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	9323771	9343843	chr19:9323771-9343843	1	+	9338549	9343068	789624	7	457,86,63,89,127,83,2149,	0,923,14024,14722,15421,17330,17923,
#Duplicated in new
chr19	9324173	9382190	chr19:9324173-9382190	1	+	9378311	9380615	789624	10	55,86,87,143,108,86,127,93,83,1602,	0,521,40688,47436,52142,54085,54788,55353,55883,56415,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	9324178	9343843	chr19:9324178-9343843	1	+	9338549	9341628	789624	7	50,86,70,89,127,83,2227,	0,516,13617,14315,15014,16923,17438,
#Partially deleted in new
chr19	9324178	9342148	chr19:9324178-9342148	1	+	9338549	9341628	789624	6	50,86,89,127,83,532,	0,516,14315,15014,16923,17438,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	9324178	9351162	chr19:9324178-9351162	1	+	9337989	9350926	789624	7	50,86,222,89,127,83,359,	0,516,13617,14315,15014,16923,26625,
#Partially deleted in new
chr19	9324178	9342084	chr19:9324178-9342084	1	+	9338549	9341469	789624	6	50,86,63,89,127,983,	0,516,13617,14315,15014,16923,
#Duplicated in new
chr19	9324178	9378311	chr19:9324178-9378311	0	+	9324178	9364873	789624	7	50,86,83,87,143,108,53,	0,516,16923,40683,47431,52137,54080,
#Duplicated in new
chr19	9324178	9379569	chr19:9324178-9379569	0	+	9324178	9376341	789624	7	50,86,87,108,86,127,43,	0,516,40683,52137,54080,54783,55348,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	9324178	9378618	chr19:9324178-9378618	0	+	9324178	9376341	789624	4	50,86,108,360,	0,516,52137,54080,
#Partially deleted in new
chr19	9324196	9342465	chr19:9324196-9342465	1	+	9337989	9341628	789624	7	32,86,222,89,127,83,849,	0,498,13599,14297,14996,16905,17420,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	9324196	9380121	chr19:9324196-9380121	0	+	9324196	9376341	789624	7	32,86,108,86,127,93,65,	0,498,52119,54062,54765,55330,55860,
#Duplicated in new
chr19	9324196	9364914	chr19:9324196-9364914	0	+	9324196	9324196	8553170	6	32,86,222,89,83,53,	0,498,13599,14297,16905,40665,
#Duplicated in new
chr19	9324196	9364930	chr19:9324196-9364930	0	+	9324196	9324196	8553170	7	32,86,63,89,127,83,69,	0,498,13599,14297,14996,16905,40665,
#Partially deleted in new
chr19	9324196	9343610	chr19:9324196-9343610	0	+	9324196	9343068	789624	4	32,86,83,1916,	0,498,16905,17498,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	9324201	9379683	chr19:9324201-9379683	0	+	9324201	9376341	789624	6	27,86,108,86,127,157,	0,493,52114,54057,54760,55325,
#Partially deleted in new
chr19	9324221	9342134	chr19:9324221-9342134	0	+	9341181	9342134	789624	3	46,83,440,	0,16880,17473,
#Duplicated in new
chr19	9324223	9379175	chr19:9324223-9379175	0	+	9324223	9376341	789624	6	5,86,87,108,86,214,	0,471,40638,52092,54035,54738,
#Partially deleted in new
chr19	9324225	9341145	chr19:9324225-9341145	0	+	9338549	9341145	789624	6	179,86,63,89,127,44,	0,469,13570,14268,14967,16876,
#Partially deleted in new
chr19	9324230	9338582	chr19:9324230-9338582	0	+	9337989	9338582	789624	4	174,86,222,89,	0,464,13565,14263,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	9324251	9345898	chr19:9324251-9345898	3	+	9338549	9343068	789624	6	529,63,89,127,83,4204,	0,13544,14242,14941,16850,17443,
#Duplicated in new
chr19	9324290	9381190	chr19:9324290-9381190	0	+	9378311	9381190	789624	9	114,86,87,108,86,127,93,83,43,	0,404,40571,52025,53968,54671,55236,55766,56857,
#Duplicated in new
chr19	9324294	9371752	chr19:9324294-9371752	0	+	9338549	9364873	789624	7	110,86,89,127,83,87,143,	0,400,14199,14898,16807,40567,47315,
#Duplicated in new
chr19	9324340	9382617	chr19:9324340-9382617	3	+	9378311	9381777	789624	12	64,86,89,65,77,87,108,86,127,93,83,1470,	0,354,14153,31316,33487,40521,51975,53918,54621,55186,55716,56807,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	9324711	9380122	chr19:9324711-9380122	0	+	9338549	9376408	789624	10	69,63,89,127,83,108,86,127,93,66,	0,13084,13782,14481,16390,51604,53547,54250,54815,55345,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	9324711	9380132	chr19:9324711-9380132	0	+	9324711	9324711	8553170	7	69,75,108,86,127,93,76,	0,5403,51604,53547,54250,54815,55345,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	9339255	9343845	chr19:9339255-9343845	0	+	9339255	9343312	789624	3	64,83,545,	0,1846,4045,
#Partially deleted in new
chr19	9348105	9348703	chr19:9348105-9348703	7	-	9348105	9348105	16724991	1	598,	0,
#Duplicated in new
chr19	9363019	9382190	chr19:9363019-9382190	3	+	9378311	9381777	789624	9	65,87,143,108,86,127,93,83,1043,	0,1842,8590,13296,15239,15942,16507,17037,18128,
#Duplicated in new
chr19	9363030	9378979	chr19:9363030-9378979	0	+	9378311	9378979	789624	5	261,87,108,86,18,	0,1831,13285,15228,15931,
#Partially deleted in new
chr19	9376410	9382185	chr19:9376410-9382185	1	+	9378311	9381777	789624	6	13,86,127,93,83,1518,	0,1848,2551,3116,3646,4257,
#Partially deleted in new
chr19	9378255	9382615	chr19:9378255-9382615	1	+	9378311	9381777	789624	5	89,127,93,83,1948,	0,706,1271,1801,2412,
#Partially deleted in new
chr19	9378255	9380615	chr19:9378255-9380615	1	+	9378311	9380615	789624	5	89,127,93,83,27,	0,706,1271,1801,2333,
#Partially deleted in new
chr19	9378268	9382617	chr19:9378268-9382617	1	+	9378311	9382429	789624	5	76,127,93,83,233,	0,693,1258,1788,4116,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	9383580	9407055	chr19:9383580-9407055	3	-	9383580	9383580	8553170	3	160,216,206,	0,1679,23269,
#Partially deleted in new
chr19	9384906	9407024	chr19:9384906-9407024	0	-	9384906	9384906	8553170	2	569,175,	0,21943,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	9412460	9435570	chr19:9412460-9435570	3	-	9413274	9420089	789624	11	2260,89,81,127,83,154,119,161,62,86,287,	0,3193,5367,6044,6756,7604,21207,21614,22337,22647,22823,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	9412597	9435526	chr19:9412597-9435526	1	-	9413274	9418538	789624	9	2123,89,81,127,538,154,62,86,243,	0,3056,5230,5907,6164,7467,22200,22510,22686,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	9412597	9435304	chr19:9412597-9435304	1	-	9413274	9418538	789624	11	2123,89,81,127,130,249,154,171,62,86,21,	0,3056,5230,5907,6168,6453,7467,21467,22200,22510,22686,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	9412600	9420745	chr19:9412600-9420745	0	-	9412600	9412600	8553170	5	2120,89,81,127,1984,	0,3053,5227,5904,6161,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	9412603	9435193	chr19:9412603-9435193	1	-	9413274	9418538	789624	10	2117,89,81,127,134,249,154,119,161,86,	0,3050,5224,5901,6158,6447,7461,21064,21471,22504,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	9412627	9435504	chr19:9412627-9435504	1	-	9413274	9418538	789624	8	2093,89,81,127,249,154,86,221,	0,3026,5200,5877,6423,7437,22480,22656,
#Partially deleted in new
chr19	9414707	9419081	chr19:9414707-9419081	0	-	9414707	9414707	8553170	4	13,89,81,577,	0,946,3120,3797,
#Partially deleted in new
chr19	9466506	9498607	chr19:9466506-9498607	3	-	9466573	9475313	789624	10	1828,83,81,127,83,81,127,86,88,70,	0,2598,3123,3885,4789,6672,7692,8777,31621,32031,
#Partially deleted in new
chr19	9468164	9469892	chr19:9468164-9469892	0	-	9468164	9468164	8553170	3	170,83,263,	0,940,1465,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	9518149	9519341	chr19:9518149-9519341	7	+	9518149	9518149	16724991	1	1192,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	9523223	9538627	chr19:9523223-9538627	3	-	9528379	9536232	789624	8	6413,83,81,127,92,149,87,53,	0,7761,9621,10616,11964,12984,15035,15351,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	9528006	9536569	chr19:9528006-9536569	1	-	9528379	9536232	789624	6	1630,83,81,127,92,362,	0,2978,4838,5833,7181,8201,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	9528006	9538590	chr19:9528006-9538590	1	-	9528379	9536210	789624	6	1630,83,81,127,149,332,	0,2978,4838,5833,8201,10252,
#Partially deleted in new
chr19	9529296	9538388	chr19:9529296-9538388	1	-	9529604	9536232	789624	6	340,81,127,92,149,130,	0,3548,4543,5891,6911,8962,
#Partially deleted in new
chr19	9529617	9538645	chr19:9529617-9538645	0	-	9532898	9536232	789624	7	19,83,81,92,149,87,71,	0,1367,3227,5570,6590,8641,8957,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	9538738	9539734	chr19:9538738-9539734	3	+	9538738	9538738	789624	2	260,599,	0,397,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	9560352	9584497	chr19:9560352-9584497	3	-	9565939	9567650	789624	6	6757,58,81,81,163,37,	0,7295,7742,8649,23833,24108,
#Partially deleted in new
chr19	9565781	9584533	chr19:9565781-9584533	1	-	9565939	9568097	789624	4	1328,81,81,73,	0,2313,3220,18679,
#Partially deleted in new
chr19	9604679	9621232	chr19:9604679-9621232	0	-	9617740	9619456	789624	7	253,83,127,138,89,151,71,	0,9341,12365,12941,13411,14752,16482,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	9607325	9621208	chr19:9607325-9621208	1	-	9610199	9617078	789624	5	4011,83,127,151,47,	0,6695,9719,12106,13836,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	9607331	9621399	chr19:9607331-9621399	3	-	9610199	9619456	789624	6	4005,83,127,89,151,238,	0,6689,9713,10759,12100,13830,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	9609755	9621230	chr19:9609755-9621230	1	-	9611304	9619456	789624	5	1581,127,89,151,69,	0,7289,8335,9676,11406,
#Partially deleted in new
chr19	9610815	9621234	chr19:9610815-9621234	0	-	9610815	9619487	789624	6	521,83,127,76,151,73,	0,3205,6229,7275,8616,10346,
#Partially deleted in new
chr19	9610936	9621195	chr19:9610936-9621195	0	-	9610936	9610936	8553170	6	400,83,123,89,151,34,	0,3084,6112,7154,8495,10225,
#Partially deleted in new
chr19	9610955	9621231	chr19:9610955-9621231	0	-	9617223	9619456	789624	6	381,83,182,89,151,70,	0,3065,6089,7135,8476,10206,
#Partially deleted in new
chr19	9611028	9614280	chr19:9611028-9614280	0	-	9611028	9611028	8553170	2	308,260,	0,2992,
#Partially deleted in new
chr19	9611105	9621232	chr19:9611105-9621232	0	-	9611105	9611105	8553170	5	231,83,89,151,71,	0,2915,6985,8326,10056,
#Partially deleted in new
chr19	9611207	9617411	chr19:9611207-9617411	0	-	9611207	9611207	8553170	3	129,83,367,	0,2813,5837,
#Partially deleted in new
chr19	9616976	9621188	chr19:9616976-9621188	0	-	9616976	9616976	8553170	4	195,89,151,27,	0,1114,2455,4185,
#Partially deleted in new
chr19	9617051	9621231	chr19:9617051-9621231	0	-	9617696	9619456	789624	5	120,148,89,151,70,	0,569,1039,2380,4110,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	9617057	9621234	chr19:9617057-9621234	0	-	9617057	9619456	789624	5	114,89,151,134,73,	0,1033,2374,3858,4104,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	9617118	9621234	chr19:9617118-9621234	0	-	9617118	9617118	8553170	5	108,89,151,134,73,	0,972,2313,3797,4043,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	9617161	9621231	chr19:9617161-9621231	0	-	9617161	9619456	789624	4	10,89,151,316,	0,929,2270,3754,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	9617201	9621231	chr19:9617201-9621231	0	-	9617201	9617201	8553170	4	25,89,151,316,	0,889,2230,3714,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	9617629	9621205	chr19:9617629-9621205	0	-	9617629	9617629	8553170	5	129,89,98,134,44,	0,461,1802,3286,3532,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	9617811	9621236	chr19:9617811-9621236	0	-	9617811	9617811	8553170	4	368,151,134,75,	0,1620,3104,3350,
#Partially deleted in new
chr19	9618062	9621219	chr19:9618062-9621219	0	-	9618062	9618062	8553170	3	117,151,58,	0,1369,3099,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	9619074	9621208	chr19:9619074-9621208	0	-	9619074	9619074	8553170	2	508,47,	0,2087,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	9621504	9634721	chr19:9621504-9634721	1	+	9621504	9621504	8553170	3	141,190,1262,	0,10723,11955,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	9621516	9634862	chr19:9621516-9634862	1	+	9621516	9621516	789624	4	129,77,190,1403,	0,5267,10711,11943,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	9621518	9632651	chr19:9621518-9632651	1	+	9621518	9621518	8553170	2	127,424,	0,10709,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	9621546	9645489	chr19:9621546-9645489	3	+	9621546	9621546	8553170	4	99,77,190,416,	0,5237,10681,23527,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	9621552	9632372	chr19:9621552-9632372	0	+	9621552	9621552	8553170	3	93,77,145,	0,5231,10675,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	9641807	9675058	chr19:9641807-9675058	1	-	9652948	9660744	789624	4	12074,107,155,44,	0,14739,18912,33207,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	9643435	9645896	chr19:9643435-9645896	0	+	9643435	9643435	8553170	1	2461,	0,
#Partially deleted in new
chr19	9652278	9675044	chr19:9652278-9675044	3	-	9652948	9660744	789624	6	1603,107,127,89,155,30,	0,4268,5730,7100,8441,22736,
#Partially deleted in new
chr19	9652712	9675082	chr19:9652712-9675082	1	-	9652948	9660744	789624	6	1166,107,127,89,155,68,	0,3834,5296,6666,8007,22302,
#Partially deleted in new
chr19	9652820	9675080	chr19:9652820-9675080	0	-	9656635	9660744	789624	5	1058,107,89,155,66,	0,3726,6558,7899,22194,
#Partially deleted in new
chr19	9653707	9675052	chr19:9653707-9675052	1	-	9653846	9660744	789624	5	174,127,89,155,38,	0,4301,5671,7012,21307,
#Partially deleted in new
chr19	9653757	9675086	chr19:9653757-9675086	0	-	9653757	9660722	789624	5	124,107,127,155,72,	0,2789,4251,6962,21257,
#Partially deleted in new
chr19	9656546	9675080	chr19:9656546-9675080	0	-	9656546	9660744	789624	5	107,127,89,102,66,	0,1462,2832,4173,18468,
#Partially deleted in new
chr19	9659462	9675048	chr19:9659462-9675048	0	-	9659462	9660744	789624	3	5,155,417,	0,1257,15169,
#Partially deleted in new
chr19	9683293	9684073	chr19:9683293-9684073	7	-	9683293	9683293	16724991	1	780,	0,
#Partially deleted in new
chr19	9689923	9694892	chr19:9689923-9694892	5	-	9689923	9689923	16724991	4	1338,115,127,114,	0,2781,3770,4855,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	9689923	9700776	chr19:9689923-9700776	7	-	9689923	9689923	16724991	3	1346,155,389,	0,6170,10464,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	9694806	9700672	chr19:9694806-9700672	4	-	9694806	9694806	16724991	4	61,155,86,285,	0,1287,5194,5581,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	9721902	9722410	chr19:9721902-9722410	3	+	9721902	9721902	8553170	1	508,	0,
#Deleted in new
chr19	9724007	9725086	chr19:9724007-9725086	7	-	9724007	9724007	16724991	2	288,695,	0,384,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	9730852	9731943	chr19:9730852-9731943	3	+	9730852	9730852	8553170	2	524,76,	0,1015,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	9751992	9768617	chr19:9751992-9768617	0	-	9758732	9764950	789624	8	62,51,118,706,87,127,100,329,	0,397,3524,6066,10089,11289,12943,16296,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	9752139	9768734	chr19:9752139-9768734	1	-	9752438	9758689	789624	6	301,706,84,180,226,446,	0,5919,9942,11142,12670,16149,
#Deleted in new
chr19	9756151	9756863	chr19:9756151-9756863	7	-	9756151	9756151	16724991	1	712,	0,
#Partially deleted in new
chr19	9757474	9768617	chr19:9757474-9768617	3	-	9757474	9764950	789624	6	1290,83,87,127,100,329,	0,2385,4607,5807,7461,10814,
#Partially deleted in new
chr19	9757474	9768305	chr19:9757474-9768305	1	-	9758732	9764950	789624	5	1290,87,127,100,17,	0,4607,5807,7461,10814,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	9758473	9762463	chr19:9758473-9762463	0	-	9758473	9758473	8553170	2	291,382,	0,3608,
#Partially deleted in new
chr19	9758546	9785996	chr19:9758546-9785996	0	-	9758546	9764950	789624	6	218,83,84,127,100,71,	0,1313,3535,4735,6389,27379,
#Partially deleted in new
chr19	9758748	9786089	chr19:9758748-9786089	0	-	9758748	9764950	789624	5	16,87,127,100,152,	0,3333,4533,6187,27189,
#Partially deleted in new
chr19	9759872	9793097	chr19:9759872-9793097	0	-	9759872	9764950	789624	5	70,87,127,100,164,	0,2209,3409,5063,33061,
#Partially deleted in new
chr19	9762099	9786023	chr19:9762099-9786023	0	-	9762099	9762099	8553170	4	69,180,226,86,	0,1182,2710,23838,
#Deleted in new
chr19	9774496	9774960	chr19:9774496-9774960	7	+	9774496	9774496	16724991	1	464,	0,
#Partially deleted in new
chr19	9787407	9793180	chr19:9787407-9793180	0	-	9787407	9787407	789624	2	403,247,	0,5526,
#Partially deleted in new
chr19	9810266	9819055	chr19:9810266-9819055	3	-	9810895	9818813	789624	3	1451,73,328,	0,8278,8461,
#Partially deleted in new
chr19	9810266	9818829	chr19:9810266-9818829	1	-	9818555	9818813	789624	2	1451,285,	0,8278,
#Partially deleted in new
chr19	9810266	9819079	chr19:9810266-9819079	1	-	9813265	9818813	789624	4	1451,44,73,352,	0,2964,8278,8461,
#Partially deleted in new
chr19	9810270	9819076	chr19:9810270-9819076	1	-	9811706	9818813	789624	3	1447,73,323,	0,8274,8483,
#Partially deleted in new
chr19	9810860	9827816	chr19:9810860-9827816	1	-	9810895	9811717	789624	3	857,73,26,	0,7684,16930,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	9810895	9813413	chr19:9810895-9813413	1	-	9810895	9811717	789624	2	822,183,	0,2335,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	9811155	9818813	chr19:9811155-9818813	0	-	9818555	9818813	789624	3	562,202,269,	0,2982,7389,
#Partially deleted in new
chr19	9811281	9819079	chr19:9811281-9819079	1	-	9813239	9818813	789624	4	436,44,73,326,	0,1949,7263,7472,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	9811307	9818816	chr19:9811307-9818816	0	-	9814339	9818813	789624	4	410,205,73,89,	0,2830,7237,7420,
#Partially deleted in new
chr19	9811453	9819075	chr19:9811453-9819075	0	-	9811453	9811717	789624	3	264,73,244,	0,7091,7378,
#Partially deleted in new
chr19	9811549	9819103	chr19:9811549-9819103	1	-	9811593	9818813	789624	2	168,376,	0,7178,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	9818153	9818845	chr19:9818153-9818845	1	-	9818298	9818813	789624	2	464,118,	0,574,
#Deleted in new
chr19	9819953	9820094	chr19:9819953-9820094	3	+	9819953	9819953	8553170	1	141,	0,
#Deleted in new
chr19	9820140	9820455	chr19:9820140-9820455	7	+	9820140	9820140	16724991	1	315,	0,
#Partially deleted in new
chr19	9827891	9830115	chr19:9827891-9830115	3	+	9828337	9830008	0	5	173,67,84,38,151,	0,435,700,945,2073,
#Partially deleted in new
chr19	9827891	9830114	chr19:9827891-9830114	1	+	9828337	9830008	0	5	93,67,84,38,150,	0,435,700,945,2073,
#Partially deleted in new
chr19	9827893	9830115	chr19:9827893-9830115	1	+	9828337	9830008	0	5	50,67,84,38,151,	0,433,698,943,2071,
#Partially deleted in new
chr19	9827895	9830115	chr19:9827895-9830115	0	+	9827895	9827895	8553170	3	89,67,151,	0,431,2069,
#Partially deleted in new
chr19	9827914	9830113	chr19:9827914-9830113	1	+	9828337	9829985	789624	4	70,63,38,149,	0,412,922,2050,
#Deleted in new
chr19	9827917	9828993	chr19:9827917-9828993	0	+	9827917	9827917	8553170	3	67,349,157,	0,409,919,
#Deleted in new
chr19	9827917	9828805	chr19:9827917-9828805	0	+	9827917	9827917	8553170	2	67,479,	0,409,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	9827925	9830076	chr19:9827925-9830076	0	+	9827925	9827925	8553170	4	59,67,84,1240,	0,401,666,911,
#Deleted in new
chr19	9834078	9835013	chr19:9834078-9835013	3	-	9834078	9834078	8553170	2	600,150,	0,785,
#Deleted in new
chr19	9835256	9836725	chr19:9835256-9836725	0	+	9835256	9835256	8553170	2	146,371,	0,1098,
#Partially deleted in new
chr19	9835322	9849682	chr19:9835322-9849682	3	+	9835344	9849199	0	4	80,213,111,593,	0,3113,12707,13767,
#Partially deleted in new
chr19	9835322	9848614	chr19:9835322-9848614	1	+	9835344	9848196	789624	3	80,213,585,	0,3113,12707,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	9835330	9849682	chr19:9835330-9849682	0	+	9835330	9835330	8553170	3	3318,111,593,	0,12699,13759,
#Partially deleted in new
chr19	9835339	9849682	chr19:9835339-9849682	0	+	9835339	9835339	789624	6	63,53,213,111,112,150,	0,1483,3096,12690,13750,14193,
#Partially deleted in new
chr19	9835340	9849682	chr19:9835340-9849682	1	+	9835344	9849199	0	5	62,213,111,112,150,	0,3095,12689,13749,14192,
#Partially deleted in new
chr19	9835345	9849399	chr19:9835345-9849399	0	+	9835345	9838466	789624	5	57,64,213,111,310,	0,2666,3090,12684,13744,
#Partially deleted in new
chr19	9835346	9849274	chr19:9835346-9849274	0	+	9835346	9835346	8553170	6	56,58,82,213,111,185,	0,1476,2670,3089,12683,13743,
#Partially deleted in new
chr19	9835368	9849214	chr19:9835368-9849214	0	+	9835368	9835368	8553170	5	34,53,213,111,125,	0,1454,3067,12661,13721,
#Partially deleted in new
chr19	9835442	9849681	chr19:9835442-9849681	0	+	9835442	9835442	8553170	6	570,521,213,111,106,149,	0,912,2993,12587,13647,14090,
#Partially deleted in new
chr19	9838598	9849682	chr19:9838598-9849682	0	+	9838598	9849199	789624	4	50,111,222,150,	0,9431,10491,10934,
#Partially deleted in new
chr19	9853717	9936552	chr19:9853717-9936552	3	-	9854185	9936366	789624	6	1146,107,220,147,150,249,	0,3089,3545,3997,6927,82586,
#Partially deleted in new
chr19	9853744	9858168	chr19:9853744-9858168	1	-	9854185	9857840	789624	5	1119,107,220,147,72,	0,3062,3518,3970,4352,
#Partially deleted in new
chr19	9854550	9858146	chr19:9854550-9858146	0	-	9856898	9857840	789624	5	313,107,96,147,50,	0,2256,2836,3164,3546,
#Partially deleted in new
chr19	9854615	9913836	chr19:9854615-9913836	0	-	9854615	9913617	789624	6	248,107,220,147,150,354,	0,2191,2647,3099,6029,58867,
#Partially deleted in new
chr19	9857207	9936324	chr19:9857207-9936324	0	-	9857207	9857207	8553170	4	275,147,150,21,	0,507,3437,79096,
#Partially deleted in new
chr19	9959560	10010471	chr19:9959560-10010471	3	-	9960410	10010385	789624	67	997,240,69,113,211,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,84,75,63,42,48,147,114,150,105,157,190,159,174,	0,1090,3258,6753,6975,7786,8343,8465,8824,9114,9788,10014,10308,11061,11414,11644,13358,14009,14195,14358,14610,14740,16997,17668,17804,18033,19013,19330,19571,19803,20278,20433,21087,21245,21527,22504,26281,26754,26992,27153,29563,29761,29908,32049,32227,32443,33266,33462,33819,34058,34192,36003,36505,36645,36872,37054,37810,38423,38541,41963,42207,44004,44480,45997,46235,46512,50737,
#Deleted in new
chr19	9967572	9968887	chr19:9967572-9968887	0	-	9967572	9967572	8553170	3	507,108,213,	0,812,1102,
#Deleted in new
chr19	9995996	9997163	chr19:9995996-9997163	3	+	9995996	9995996	8553170	1	1167,	0,
#Partially deleted in new
chr19	10013248	10022279	chr19:10013248-10022279	3	+	10013437	10021749	789624	6	352,159,180,94,184,746,	0,3808,5482,7460,8006,8285,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	10017165	10021088	chr19:10017165-10021088	0	+	10017165	10017165	8553170	2	50,380,	0,3543,
#Partially deleted in new
chr19	10020760	10022070	chr19:10020760-10022070	0	+	10020760	10021606	789624	3	42,123,537,	0,555,773,
#Partially deleted in new
chr19	10037802	10074135	chr19:10037802-10074135	5	+	10037802	10037802	16724991	39	268,103,82,52,73,97,103,94,215,145,210,210,162,129,78,198,112,86,140,69,52,87,213,76,169,90,299,173,159,60,91,46,88,87,106,87,90,136,219,	0,789,1104,1326,1509,1827,3360,3576,3815,4677,4908,5345,5844,6268,7255,8549,8927,9322,9516,12193,14499,14726,14959,17444,17790,20765,21007,24006,24382,27776,30021,31163,32488,32832,33179,35121,35287,35497,36114,
#Partially deleted in new
chr19	10038353	10038413	chr19:10038353-10038413	3	+	10038353	10038353	5263520	1	60,	0,
#Partially deleted in new
chr19	10041840	10074135	chr19:10041840-10074135	7	+	10041840	10041840	16724991	29	5,141,210,210,162,78,198,112,86,140,69,52,87,76,169,90,299,173,159,60,91,46,88,87,106,87,90,136,219,	0,643,870,1307,1806,3217,4511,4889,5284,5478,8155,10461,10688,13406,13752,16727,16969,19968,20344,23738,25983,27125,28450,28794,29141,31083,31249,31459,32076,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	10086121	10088260	chr19:10086121-10088260	0	+	10086121	10086121	8553170	3	327,124,1010,	0,807,1129,
#Partially deleted in new
chr19	10086129	10093245	chr19:10086129-10093245	3	+	10086427	10092302	789624	8	319,124,50,39,150,104,155,1176,	0,799,1121,3527,3768,5120,5346,5940,
#Partially deleted in new
chr19	10086296	10093252	chr19:10086296-10093252	0	+	10086296	10086296	8553170	7	152,124,50,39,150,381,1183,	0,632,954,3360,3601,4953,5773,
#Partially deleted in new
chr19	10086339	10092927	chr19:10086339-10092927	1	+	10086427	10092302	789624	8	109,124,50,39,150,104,47,858,	0,589,911,3317,3558,4910,5244,5730,
#Partially deleted in new
chr19	10086347	10091545	chr19:10086347-10091545	0	+	10086427	10089675	789624	9	101,124,50,98,72,39,150,104,70,	0,581,903,2763,2959,3309,3550,4902,5128,
#Partially deleted in new
chr19	10086786	10089993	chr19:10086786-10089993	0	+	10089202	10089993	789624	6	266,50,98,72,39,96,	0,464,2324,2520,2870,3111,
#Partially deleted in new
chr19	10086851	10093242	chr19:10086851-10093242	1	+	10089336	10092302	789624	8	201,50,268,39,150,104,155,1173,	0,399,2259,2805,3046,4398,4624,5218,
#Partially deleted in new
chr19	10087043	10089901	chr19:10087043-10089901	0	+	10087043	10089382	789624	5	9,50,98,389,4,	0,207,2067,2263,2854,
#Deleted in new
chr19	10089031	10090377	chr19:10089031-10090377	3	-	10089031	10089031	8553170	1	1346,	0,
#Deleted in new
chr19	10089446	10090047	chr19:10089446-10090047	0	+	10089446	10089446	8553170	2	249,150,	0,451,
#Partially deleted in new
chr19	10089656	10092325	chr19:10089656-10092325	0	+	10089656	10092192	789624	5	39,119,104,47,256,	0,272,1593,1927,2413,
#Deleted in new
chr19	10091589	10093244	chr19:10091589-10093244	0	+	10091589	10091589	8553170	1	1655,	0,
#Partially deleted in new
chr19	10092337	10096598	chr19:10092337-10096598	1	-	10092588	10096563	789624	5	442,271,68,181,617,	0,1011,1475,2420,3644,
#Partially deleted in new
chr19	10092338	10102659	chr19:10092338-10102659	1	-	10092588	10096563	789624	6	441,271,188,181,592,108,	0,1010,1354,2419,3643,10213,
#Partially deleted in new
chr19	10092340	10102796	chr19:10092340-10102796	3	-	10092588	10096563	789624	6	439,271,188,181,592,229,	0,1008,1352,2417,3641,10227,
#Partially deleted in new
chr19	10094520	10096131	chr19:10094520-10096131	0	-	10094520	10094520	8553170	2	418,150,	0,1461,
#Partially deleted in new
chr19	10106222	10114780	chr19:10106222-10114780	1	+	10106394	10113854	789624	13	190,171,102,51,171,77,108,124,79,130,170,140,1148,	0,278,1282,1581,1741,3408,3690,3900,4101,4262,4474,4722,7410,
#Partially deleted in new
chr19	10106288	10111294	chr19:10106288-10111294	3	+	10106394	10111165	789624	12	124,171,102,51,171,77,108,124,79,130,170,350,	0,212,1216,1515,1675,3342,3624,3834,4035,4196,4408,4656,
#Partially deleted in new
chr19	10106394	10114738	chr19:10106394-10114738	3	+	10106394	10114738	789624	13	18,171,102,51,171,77,108,124,79,130,170,78,1106,	0,106,1110,1409,1569,3236,3518,3728,3929,4090,4302,4550,7238,
#Partially deleted in new
chr19	10106418	10111254	chr19:10106418-10111254	1	+	10106641	10111165	789624	11	253,102,51,171,77,108,124,79,130,170,310,	0,1086,1385,1545,3212,3494,3704,3905,4066,4278,4526,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	10106638	10110241	chr19:10106638-10110241	0	+	10107002	10110241	789624	8	33,183,102,51,171,77,108,119,	0,184,866,1165,1325,2992,3274,3484,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	10106699	10108098	chr19:10106699-10108098	0	+	10107002	10108098	789624	4	306,102,51,135,	0,805,1104,1264,
#Partially deleted in new
chr19	10107650	10107735	chr19:10107650-10107735	3	+	10107650	10107650	789624	1	85,	0,
#Partially deleted in new
chr19	10107989	10110315	chr19:10107989-10110315	0	+	10107989	10107989	8553170	4	145,77,108,193,	0,1641,1923,2133,
#Partially deleted in new
chr19	10109756	10109835	chr19:10109756-10109835	3	+	10109756	10109756	789624	1	79,	0,
#Partially deleted in new
chr19	10109961	10110829	chr19:10109961-10110829	0	+	10109961	10109961	8553170	4	285,79,130,133,	0,362,523,735,
#Partially deleted in new
chr19	10110145	10111296	chr19:10110145-10111296	0	+	10110145	10111165	789624	5	101,79,130,95,352,	0,178,339,551,799,
#Partially deleted in new
chr19	10110457	10111634	chr19:10110457-10111634	0	+	10110457	10110457	8553170	3	157,170,690,	0,239,487,
#Partially deleted in new
chr19	10111537	10115372	chr19:10111537-10115372	3	+	10111721	10114738	0	2	203,1740,	0,2095,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	10112103	10113834	chr19:10112103-10113834	0	+	10112103	10112103	8553170	2	352,202,	0,1529,
#Partially deleted in new
chr19	10115016	10119902	chr19:10115016-10119902	3	-	10115113	10119859	0	11	113,107,137,108,190,105,60,89,84,47,63,	0,462,667,950,1783,2067,3651,3851,4071,4637,4823,
#Partially deleted in new
chr19	10115017	10116827	chr19:10115017-10116827	0	-	10115113	10116827	789624	5	112,107,98,108,28,	0,461,666,949,1782,
#Partially deleted in new
chr19	10115061	10116688	chr19:10115061-10116688	0	-	10115061	10115061	8553170	4	68,107,137,722,	0,417,622,905,
#Partially deleted in new
chr19	10115533	10119864	chr19:10115533-10119864	0	-	10115533	10119859	789624	10	52,137,108,166,105,60,89,84,47,25,	0,150,433,1290,1550,3134,3334,3554,4120,4306,
#Partially deleted in new
chr19	10115736	10119886	chr19:10115736-10119886	0	-	10115736	10119859	789624	8	84,108,190,60,89,84,47,47,	0,230,1063,2931,3131,3351,3917,4103,
#Partially deleted in new
chr19	10115741	10119899	chr19:10115741-10119899	0	-	10115741	10119859	789624	9	79,108,190,105,60,95,84,47,60,	0,225,1058,1342,2926,3120,3346,3912,4098,
#Partially deleted in new
chr19	10116049	10119905	chr19:10116049-10119905	0	-	10116049	10116049	8553170	6	940,105,60,304,47,66,	0,1034,2618,2818,3604,3790,
#Partially deleted in new
chr19	10116835	10119869	chr19:10116835-10119869	0	-	10119079	10119859	789624	7	154,105,60,89,105,47,30,	0,248,1832,2032,2231,2818,3004,
#Partially deleted in new
chr19	10116900	10117590	chr19:10116900-10117590	0	-	10116900	10116900	8553170	2	89,507,	0,183,
#Partially deleted in new
chr19	10116942	10119878	chr19:10116942-10119878	0	-	10119199	10119859	789624	7	47,105,60,89,168,47,39,	0,141,1725,1925,2145,2711,2897,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	10118075	10119700	chr19:10118075-10119700	0	-	10118075	10118075	8553170	5	482,60,89,84,47,	0,592,792,1012,1578,
#Deleted in new
chr19	10118883	10119848	chr19:10118883-10119848	0	-	10118883	10118883	8553170	3	73,84,195,	0,204,770,
#Deleted in new
chr19	10118886	10119918	chr19:10118886-10119918	0	-	10118886	10118886	8553170	2	814,79,	0,953,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	10133344	10144754	chr19:10133344-10144754	0	-	10133344	10133344	8553170	13	357,91,117,167,196,178,167,142,283,129,85,193,989,	0,872,2391,2776,3740,4487,5094,6331,6701,7436,7760,8683,10421,
#Partially deleted in new
chr19	10133345	10195135	chr19:10133345-10195135	3	-	10133666	10194899	0	40	356,91,117,167,196,178,167,142,283,129,85,193,222,174,134,205,116,148,98,187,188,152,93,119,110,81,46,35,82,35,88,35,85,35,79,76,220,108,37,316,	0,871,2390,2775,3739,4486,5093,6330,6700,7435,7759,8682,10420,13005,15538,16107,16507,18052,18404,20947,21240,21559,22507,23045,26312,26496,26672,27038,29321,29980,33252,34984,39744,40525,42194,43946,47004,47432,48695,61474,
#Partially deleted in new
chr19	10133350	10135517	chr19:10133350-10135517	0	-	10133350	10133350	8553170	3	351,91,79,	0,866,2088,
#Partially deleted in new
chr19	10133366	10140130	chr19:10133366-10140130	0	-	10135618	10140130	789624	9	335,91,414,167,196,178,167,142,85,	0,850,2072,2754,3718,4465,5072,6309,6679,
#Partially deleted in new
chr19	10137466	10138470	chr19:10137466-10138470	0	-	10137466	10137466	8553170	2	543,32,	0,972,
#Partially deleted in new
chr19	10137887	10140195	chr19:10137887-10140195	0	-	10137887	10137887	8553170	3	122,167,520,	0,551,1788,
#Partially deleted in new
chr19	10140029	10143901	chr19:10140029-10143901	0	-	10140029	10140029	8553170	5	16,129,85,193,136,	0,751,1075,1998,3736,
#Partially deleted in new
chr19	10140253	10141572	chr19:10140253-10141572	0	-	10140253	10140253	8553170	3	75,129,468,	0,527,851,
#Partially deleted in new
chr19	10140279	10142896	chr19:10140279-10142896	0	-	10140279	10140279	8553170	5	49,129,85,193,78,	0,501,825,1748,2539,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	10140528	10142074	chr19:10140528-10142074	0	-	10140528	10140528	8553170	3	381,85,47,	0,576,1499,
#Partially deleted in new
chr19	10140688	10141446	chr19:10140688-10141446	0	-	10140688	10140688	8553170	2	221,342,	0,416,
#Partially deleted in new
chr19	10141696	10143791	chr19:10141696-10143791	0	-	10141696	10141696	8553170	2	524,26,	0,2069,
#Partially deleted in new
chr19	10148924	10151697	chr19:10148924-10151697	0	-	10148924	10148924	8553170	4	93,205,116,300,	0,528,928,2473,
#Partially deleted in new
chr19	10149947	10154977	chr19:10149947-10154977	0	-	10154637	10154977	789624	6	21,148,98,187,145,73,	0,1450,1802,4345,4638,4957,
#Partially deleted in new
chr19	10154663	10160263	chr19:10154663-10160263	0	-	10154663	10154663	8553170	7	110,152,93,119,110,81,246,	0,241,1189,1727,4994,5178,5354,
#Partially deleted in new
chr19	10159911	10166671	chr19:10159911-10166671	0	-	10159911	10159911	8553170	5	11,401,82,35,74,	0,106,2755,3414,6686,
#Partially deleted in new
chr19	10159943	10166666	chr19:10159943-10166666	0	-	10159943	10159943	8553170	5	120,35,82,35,69,	0,440,2723,3382,6654,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	10160206	10162983	chr19:10160206-10162983	0	-	10160206	10160206	8553170	2	212,317,	0,2460,
#Partially deleted in new
chr19	10168329	10194904	chr19:10168329-10194904	0	-	10180830	10194899	789624	9	35,85,35,79,76,220,59,37,85,	0,4760,5541,7210,8962,12020,12448,13711,26490,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	10173089	10231286	chr19:10173089-10231286	0	-	10173089	10180431	789624	9	85,35,79,76,220,108,37,118,83,	0,781,2450,4202,7260,7688,8951,45662,58114,
#Partially deleted in new
chr19	10175539	10201192	chr19:10175539-10201192	0	-	10175539	10200883	789624	8	79,76,220,108,37,235,144,74,	0,1752,4810,5238,6501,19280,25334,25579,
#Partially deleted in new
chr19	10175562	10194626	chr19:10175562-10194626	0	-	10175562	10180431	789624	6	56,76,220,108,37,94,	0,1729,4787,5215,6478,18970,
#Partially deleted in new
chr19	10180354	10201197	chr19:10180354-10201197	0	-	10180354	10180431	789624	5	215,108,37,144,79,	0,423,1686,20519,20764,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	10180462	10184559	chr19:10180462-10184559	0	-	10180462	10180462	8553170	4	107,108,37,237,	0,315,1578,3860,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	10221432	10231272	chr19:10221432-10231272	1	-	10223843	10224905	0	2	3515,69,	0,9771,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	10221432	10231331	chr19:10221432-10231331	3	-	10223843	10224905	0	2	3515,128,	0,9771,
#Deleted in new
chr19	10230412	10230485	chr19:10230412-10230485	3	+	10230412	10230412	789624	1	73,	0,
#Partially deleted in new
chr19	10251900	10259778	chr19:10251900-10259778	0	+	10252253	10259778	789624	10	109,165,67,151,52,118,107,110,77,162,	0,245,496,650,2688,4807,6321,6512,6708,7716,
#Partially deleted in new
chr19	10251943	10258667	chr19:10251943-10258667	0	+	10252253	10258278	789624	8	66,165,67,151,52,107,110,59,	0,202,453,607,2645,6278,6469,6665,
#Partially deleted in new
chr19	10251963	10260043	chr19:10251963-10260043	3	+	10252253	10259813	0	10	46,165,67,151,52,118,107,110,77,427,	0,182,433,587,2625,4744,6258,6449,6645,7653,
#Partially deleted in new
chr19	10251966	10260045	chr19:10251966-10260045	1	+	10252253	10259813	0	9	344,67,151,52,118,107,110,77,429,	0,430,584,2622,4741,6255,6446,6642,7650,
#Partially deleted in new
chr19	10251997	10258234	chr19:10251997-10258234	0	+	10252253	10258234	789624	6	313,100,151,52,118,13,	0,366,553,2591,4710,6224,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	10252009	10259125	chr19:10252009-10259125	1	+	10252253	10258738	0	8	301,67,151,52,118,107,110,517,	0,387,541,2579,4698,6212,6403,6599,
#Partially deleted in new
chr19	10252226	10260025	chr19:10252226-10260025	1	+	10252253	10259506	789624	9	84,67,151,52,118,107,110,77,854,	0,170,324,2362,4481,5995,6186,6382,6945,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	10252257	10255717	chr19:10252257-10255717	0	+	10252257	10252257	8553170	3	53,305,1129,	0,139,2331,
#Partially deleted in new
chr19	10252267	10285108	chr19:10252267-10285108	3	-	10252267	10252267	8553170	3	560,217,141,	0,7944,32700,
#Partially deleted in new
chr19	10252275	10258623	chr19:10252275-10258623	1	+	10252342	10258526	789624	6	188,151,52,118,107,211,	0,275,2313,4432,5946,6137,
#Partially deleted in new
chr19	10252304	10253029	chr19:10252304-10253029	0	+	10252304	10252304	8553170	3	6,67,479,	0,92,246,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	10254619	10259042	chr19:10254619-10259042	0	+	10254619	10258526	789624	4	21,118,107,630,	0,2088,3602,3793,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	10259108	10260045	chr19:10259108-10260045	3	-	10259108	10259108	8553170	2	133,222,	0,715,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	10270834	10286615	chr19:10270834-10286615	3	+	10271159	10285287	0	7	392,264,306,288,255,246,1501,	0,3930,12646,13198,13568,13948,14280,
#Partially deleted in new
chr19	10271092	10285583	chr19:10271092-10285583	1	+	10271159	10285287	789624	5	134,192,255,246,469,	0,13036,13310,13690,14022,
#Partially deleted in new
chr19	10271119	10283753	chr19:10271119-10283753	0	+	10271159	10283753	789624	4	107,264,14,196,	0,3645,12361,12438,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	10282257	10283586	chr19:10282257-10283586	0	+	10282257	10282257	8553170	2	85,475,	0,854,
#Deleted in new
chr19	10283281	10284098	chr19:10283281-10284098	0	+	10283281	10283281	8553170	2	505,66,	0,751,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	10285800	10289019	chr19:10285800-10289019	3	-	10285800	10285800	8553170	1	3219,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	10286966	10288520	chr19:10286966-10288520	3	+	10287012	10288104	789624	3	440,303,535,	0,569,1019,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	10286973	10288502	chr19:10286973-10288502	1	+	10287012	10288184	789624	3	433,226,517,	0,639,1012,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	10287003	10288522	chr19:10287003-10288522	1	+	10287012	10287855	789624	2	403,987,	0,532,
#Partially deleted in new
chr19	10289980	10296778	chr19:10289980-10296778	3	+	10290043	10296616	0	11	145,270,321,288,255,249,246,279,240,267,440,	0,1091,1508,2054,2631,3017,3717,4059,4420,5365,6358,
#Deleted in new
chr19	10289992	10290920	chr19:10289992-10290920	0	+	10289992	10289992	8553170	1	928,	0,
#Deleted in new
chr19	10290023	10291708	chr19:10290023-10291708	0	+	10290023	10290023	8553170	3	102,245,220,	0,1048,1465,
#Deleted in new
chr19	10290976	10291747	chr19:10290976-10291747	0	+	10291511	10291747	789624	2	365,259,	0,512,
#Partially deleted in new
chr19	10291472	10296776	chr19:10291472-10296776	0	+	10291472	10291472	8553170	9	337,288,255,249,246,279,240,267,438,	0,562,1139,1525,2225,2567,2928,3873,4866,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	10304802	10309880	chr19:10304802-10309880	3	-	10305090	10308681	789624	4	406,94,107,1696,	0,587,1043,3382,
#Partially deleted in new
chr19	10304802	10305611	chr19:10304802-10305611	0	-	10304802	10304802	8553170	2	406,222,	0,587,
#Partially deleted in new
chr19	10305074	10309783	chr19:10305074-10309783	1	-	10305090	10308429	789624	6	134,94,107,366,100,227,	0,315,771,3110,4274,4482,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	10305426	10316009	chr19:10305426-10316009	3	-	10310571	10316005	789624	11	57,107,207,71,100,727,279,88,107,55,158,	0,419,2758,3053,3922,4130,4900,5426,9959,10278,10425,
#Partially deleted in new
chr19	10308371	10315768	chr19:10308371-10315768	0	-	10308371	10308371	8553170	7	179,100,127,220,88,107,64,	0,977,1185,2051,2481,7014,7333,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	10310044	10316015	chr19:10310044-10316015	3	-	10310485	10316005	789624	5	598,88,107,55,164,	0,808,5341,5660,5807,
#Partially deleted in new
chr19	10310216	10315795	chr19:10310216-10315795	1	-	10310485	10310632	789624	4	426,88,168,91,	0,636,5169,5488,
#Partially deleted in new
chr19	10310354	10316015	chr19:10310354-10316015	1	-	10310485	10310632	789624	5	288,88,107,55,46,	0,498,5031,5350,5615,
#Partially deleted in new
chr19	10310472	10315996	chr19:10310472-10315996	0	-	10310472	10310472	8553170	4	170,88,374,145,	0,380,4913,5379,
#Partially deleted in new
chr19	10310495	10316013	chr19:10310495-10316013	0	-	10310495	10310495	8553170	4	110,88,107,309,	0,357,4890,5209,
#Partially deleted in new
chr19	10310508	10316010	chr19:10310508-10316010	0	-	10310508	10310508	8553170	4	134,88,107,306,	0,344,4877,5196,
#Deleted in new
chr19	10315330	10316006	chr19:10315330-10316006	0	-	10315330	10315330	8553170	2	429,155,	0,521,
#Partially deleted in new
chr19	10315470	10320678	chr19:10315470-10320678	3	-	10317453	10320678	789624	8	22,55,80,1366,84,144,75,24,	0,234,547,764,2219,2758,3695,5184,
#Partially deleted in new
chr19	10316211	10333640	chr19:10316211-10333640	3	-	10317453	10333558	789624	13	1389,84,144,75,297,212,88,95,130,192,470,67,352,	0,1478,2017,2954,4443,4836,5319,6433,6933,7163,12430,14248,17077,
#Partially deleted in new
chr19	10316211	10333546	chr19:10316211-10333546	1	-	10317453	10333507	789624	13	1389,84,144,75,297,212,88,95,130,192,470,67,258,	0,1478,2017,2954,4443,4836,5319,6433,6933,7163,12430,14248,17077,
#Partially deleted in new
chr19	10316214	10333511	chr19:10316214-10333511	0	-	10316214	10316214	8553170	10	1386,84,144,75,297,1692,130,192,470,223,	0,1475,2014,2951,4440,4833,6930,7160,12427,17074,
#Partially deleted in new
chr19	10316218	10333638	chr19:10316218-10333638	1	-	10317453	10333558	789624	13	1382,84,144,75,297,212,88,95,130,192,470,67,350,	0,1471,2010,2947,4436,4829,5312,6426,6926,7156,12423,14241,17070,
#Partially deleted in new
chr19	10317473	10333638	chr19:10317473-10333638	1	-	10317473	10333507	0	10	300,90,170,88,95,130,192,470,67,350,	0,755,3616,4057,5171,5671,5901,11168,12986,15815,
#Partially deleted in new
chr19	10318295	10321162	chr19:10318295-10321162	0	-	10318295	10318295	8553170	5	77,75,109,94,115,	0,870,2359,2562,2752,
#Partially deleted in new
chr19	10318365	10323157	chr19:10318365-10323157	0	-	10320679	10323157	789624	7	7,75,128,94,88,95,13,	0,800,2289,2492,3165,4279,4779,
#Partially deleted in new
chr19	10323505	10333491	chr19:10323505-10333491	0	-	10329032	10333491	789624	4	61,411,67,203,	0,5136,6954,9783,
#Deleted in new
chr19	10333435	10336248	chr19:10333435-10336248	3	+	10333435	10333435	8553170	1	2813,	0,
#Partially deleted in new
chr19	10333775	10339823	chr19:10333775-10339823	3	-	10333856	10339614	0	7	284,249,255,288,306,267,285,	0,384,752,1290,1895,4906,5763,
#Partially deleted in new
chr19	10333775	10339661	chr19:10333775-10339661	0	-	10333775	10333775	8553170	4	284,1817,267,123,	0,384,4906,5763,
#Partially deleted in new
chr19	10333775	10339629	chr19:10333775-10339629	0	-	10333775	10333775	8553170	6	284,249,255,911,267,91,	0,384,752,1290,4906,5763,
#Deleted in new
chr19	10333777	10334723	chr19:10333777-10334723	0	-	10333856	10334723	789624	3	282,180,196,	0,451,750,
#Partially deleted in new
chr19	10333778	10339619	chr19:10333778-10339619	1	-	10333856	10338793	789624	7	281,249,255,288,306,564,81,	0,381,749,1287,1892,4903,5760,
#Deleted in new
chr19	10333974	10335773	chr19:10333974-10335773	0	-	10333974	10335773	789624	5	85,249,255,213,103,	0,185,553,1166,1696,
#Partially deleted in new
chr19	10335145	10339624	chr19:10335145-10339624	0	-	10338759	10339614	789624	3	831,182,86,	0,3536,4393,
#Partially deleted in new
chr19	10335888	10339624	chr19:10335888-10339624	0	-	10335888	10339145	789624	4	88,182,228,86,	0,2793,3129,3650,
#Partially deleted in new
chr19	10335966	10339641	chr19:10335966-10339641	0	-	10335966	10338793	789624	4	10,267,184,103,	0,2715,3095,3572,
#Partially deleted in new
chr19	10338723	10339635	chr19:10338723-10339635	0	-	10338723	10338793	789624	2	485,97,	0,815,
#Partially deleted in new
chr19	10350528	10378508	chr19:10350528-10378508	1	-	10350833	10378406	0	23	440,111,118,173,119,193,98,151,155,136,128,88,186,104,193,109,158,198,382,164,148,124,295,	0,523,1905,2397,2999,3513,3983,6039,7235,7474,8646,10982,11241,11549,11735,12020,14085,14322,14988,15888,17526,17766,27685,
#Partially deleted in new
chr19	10350532	10380565	chr19:10350532-10380565	1	-	10350833	10366490	789624	21	436,111,118,173,119,193,98,151,155,136,128,88,186,104,193,109,158,198,382,164,56,	0,519,1901,2393,2995,3509,3979,6035,7231,7470,8642,10978,11237,11545,11731,12016,14081,14318,14984,15884,29977,
#Partially deleted in new
chr19	10350532	10380676	chr19:10350532-10380676	3	-	10350833	10378406	0	25	436,111,118,173,119,193,98,151,155,136,128,88,186,104,193,109,158,198,382,164,148,124,213,165,297,	0,519,1901,2393,2995,3509,3979,6035,7231,7470,8642,10978,11237,11545,11731,12016,14081,14318,14984,15884,17522,17762,27681,29082,29847,
#Partially deleted in new
chr19	10350532	10352492	chr19:10350532-10352492	0	-	10350833	10352492	789624	2	436,59,	0,1901,
#Partially deleted in new
chr19	10350532	10353256	chr19:10350532-10353256	0	-	10350532	10350532	8553170	2	436,331,	0,2393,
#Partially deleted in new
chr19	10350747	10356613	chr19:10350747-10356613	0	-	10350876	10356613	789624	4	221,193,98,46,	0,3294,3764,5820,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	10350787	10353137	chr19:10350787-10353137	0	-	10350787	10350787	8553170	2	506,116,	0,2234,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	10350852	10351285	chr19:10350852-10351285	0	-	10350852	10350852	8553170	2	116,234,	0,199,
#Partially deleted in new
chr19	10350946	10354522	chr19:10350946-10354522	0	-	10352521	10354522	789624	6	22,111,118,173,193,11,	0,105,1487,1979,3095,3565,
#Partially deleted in new
chr19	10352433	10354078	chr19:10352433-10354078	0	-	10352433	10352433	8553170	3	118,173,551,	0,492,1094,
#Partially deleted in new
chr19	10353910	10357901	chr19:10353910-10357901	0	-	10353910	10353910	8553170	4	324,98,151,138,	0,601,2657,3853,
#Partially deleted in new
chr19	10354537	10357084	chr19:10354537-10357084	0	-	10354537	10354537	8553170	2	72,517,	0,2030,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr19	10357384	10380525	chr19:10357384-10380525	1	-	10357463	10378406	789624	17	534,136,128,88,186,104,193,109,158,198,382,164,148,124,213,165,146,	0,618,1790,4126,4385,4693,4879,5164,7229,7466,8132,9032,10670,10910,20829,22230,22995,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	10357793	10361905	chr19:10357793-10361905	0	-	10361050	10361905	789624	6	125,136,128,112,88,136,	0,209,1381,3168,3717,3976,
#Deleted in new
chr19	10361304	10362183	chr19:10361304-10362183	0	-	10361304	10361304	8553170	3	294,186,106,	0,465,773,
#Partially deleted in new
chr19	10362579	10365863	chr19:10362579-10365863	0	-	10362579	10365863	789624	3	78,158,347,	0,2034,2937,
#Deleted in new
chr19	10368062	10368539	chr19:10368062-10368539	0	-	10368062	10368062	8553170	2	140,245,	0,232,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	10368121	10368741	chr19:10368121-10368741	0	-	10368121	10368121	8553170	3	81,77,210,	0,173,410,
#Partially deleted in new
chr19	10368163	10380572	chr19:10368163-10380572	0	-	10368163	10378406	789624	5	39,124,213,75,193,	0,131,10050,11451,12216,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	10368328	10380510	chr19:10368328-10380510	0	-	10368328	10378406	789624	5	90,121,213,165,131,	0,1428,9885,11286,12051,
#Partially deleted in new
chr19	10391133	10403533	chr19:10391133-10403533	3	-	10391550	10403479	0	8	573,72,183,123,116,109,276,156,	0,1952,2125,3887,4094,4301,4794,12244,
#Partially deleted in new
chr19	10391452	10403530	chr19:10391452-10403530	0	-	10391452	10391452	8553170	7	254,72,183,123,316,276,153,	0,1633,1806,3568,3775,4475,11925,
#Partially deleted in new
chr19	10391517	10395268	chr19:10391517-10395268	0	-	10391550	10395268	789624	5	189,72,162,123,41,	0,1568,1762,3503,3710,
#Partially deleted in new
chr19	10392775	10393413	chr19:10392775-10393413	0	-	10392998	10393413	789624	2	382,155,	0,483,
#Partially deleted in new
chr19	10393084	10393786	chr19:10393084-10393786	0	-	10393084	10393084	8553170	2	73,528,	0,174,
#Partially deleted in new
chr19	10393094	10403517	chr19:10393094-10403517	0	-	10393094	10403479	789624	6	63,183,18,48,276,140,	0,164,1926,2401,2833,10283,
#Partially deleted in new
chr19	10393259	10420121	chr19:10393259-10420121	0	-	10393259	10403479	789624	8	182,123,116,262,276,218,137,75,	0,1761,1968,2175,2668,10118,26201,26787,
#Partially deleted in new
chr19	10393290	10395837	chr19:10393290-10395837	0	-	10393290	10393290	8553170	4	151,123,116,403,	0,1730,1937,2144,
#Partially deleted in new
chr19	10393407	10395991	chr19:10393407-10395991	0	-	10393407	10393407	8553170	4	34,123,469,64,	0,1613,1820,2520,
#Partially deleted in new
chr19	10395022	10403511	chr19:10395022-10403511	0	-	10400612	10403479	789624	5	121,316,276,119,134,	0,205,905,5552,8355,
#Deleted in new
chr19	10403457	10403538	chr19:10403457-10403538	3	-	10403457	10403457	5263520	1	81,	0,
#Partially deleted in new
chr19	10416772	10467649	chr19:10416772-10467649	1	+	10416942	10467621	0	17	25,107,206,192,37,71,50,113,94,224,99,165,100,155,123,183,763,	0,111,887,29445,32144,32307,33830,34056,38056,41106,42627,42822,44231,44753,45104,47020,50114,
#Partially deleted in new
chr19	10420654	10469631	chr19:10420654-10469631	3	+	10420764	10467621	0	15	430,192,37,71,50,113,94,224,99,165,100,155,123,183,2745,	0,25563,28262,28425,29948,30174,34174,37224,38745,38940,40349,40871,41222,43138,46232,
#Partially deleted in new
chr19	10430844	10467621	chr19:10430844-10467621	1	+	10430844	10467621	0	15	242,192,37,71,50,113,94,224,99,165,100,155,123,183,735,	0,15373,18072,18235,19758,19984,23984,27034,28555,28750,30159,30681,31032,32948,36042,
#Partially deleted in new
chr19	10432434	10467621	chr19:10432434-10467621	1	+	10432434	10467621	0	15	137,192,37,71,50,113,94,224,99,165,100,155,123,183,735,	0,13783,16482,16645,18168,18394,22394,25444,26965,27160,28569,29091,29442,31358,34452,
#Partially deleted in new
chr19	10450830	10461929	chr19:10450830-10461929	0	+	10450830	10461929	789624	7	111,94,224,99,100,155,53,	0,3998,7048,8569,10173,10695,11046,
#Partially deleted in new
chr19	10452938	10467931	chr19:10452938-10467931	1	+	10453263	10467621	0	10	391,94,224,99,165,100,155,123,183,1045,	0,1890,4940,6461,6656,8065,8587,8938,10854,13948,
#Partially deleted in new
chr19	10452956	10467365	chr19:10452956-10467365	0	+	10453263	10461556	789624	6	373,94,100,474,183,479,	0,1872,8047,8569,10836,13930,
#Partially deleted in new
chr19	10453283	10459730	chr19:10453283-10459730	0	+	10453283	10453283	8553170	4	46,94,224,331,	0,1545,4595,6116,
#Partially deleted in new
chr19	10458968	10467366	chr19:10458968-10467366	0	+	10458968	10458968	8553170	7	530,165,100,155,123,217,480,	0,626,2035,2557,2908,4824,7918,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	10486119	10503741	chr19:10486119-10503741	3	-	10486651	10500033	0	6	699,177,206,686,686,501,	0,3072,3528,5457,13275,17121,
#Partially deleted in new
chr19	10486124	10491720	chr19:10486124-10491720	0	-	10486651	10491720	789624	3	694,206,144,	0,3523,5452,
#Partially deleted in new
chr19	10486125	10502896	chr19:10486125-10502896	1	-	10486651	10500033	0	6	693,177,206,686,686,200,	0,3066,3522,5451,13269,16571,
#Partially deleted in new
chr19	10486611	10489435	chr19:10486611-10489435	0	-	10486611	10486611	8553170	2	207,244,	0,2580,
#Partially deleted in new
chr19	10486717	10491880	chr19:10486717-10491880	0	-	10489322	10491880	789624	3	101,177,304,	0,2474,4859,
#Partially deleted in new
chr19	10491998	10503558	chr19:10491998-10503558	0	-	10499515	10503558	789624	3	264,192,318,	0,7396,11242,
#Partially deleted in new
chr19	10492063	10503186	chr19:10492063-10503186	0	-	10492063	10500033	789624	3	199,686,94,	0,7331,11029,
#Partially deleted in new
chr19	10499394	10502687	chr19:10499394-10502687	0	-	10499394	10500033	789624	2	686,300,	0,2993,
#Partially deleted in new
chr19	10499397	10502685	chr19:10499397-10502685	0	-	10499397	10500033	789624	2	683,277,	0,3011,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	10512741	10517450	chr19:10512741-10517450	1	-	10513814	10515011	789624	2	2288,53,	0,4656,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	10512891	10515021	chr19:10512891-10515021	1	-	10513814	10515011	789624	2	1439,259,	0,1871,
#Partially deleted in new
chr19	10512946	10517931	chr19:10512946-10517931	3	-	10513814	10515011	789624	2	2083,108,	0,4877,
#Partially deleted in new
chr19	10514851	10517427	chr19:10514851-10517427	0	-	10514851	10517088	789624	2	178,387,	0,2189,
#Partially deleted in new
chr19	10543894	10553124	chr19:10543894-10553124	0	+	10544090	10545046	789624	10	431,158,174,277,65,131,79,77,120,240,	0,814,1062,2944,3294,5009,8002,8150,8310,8990,
#Partially deleted in new
chr19	10543916	10553067	chr19:10543916-10553067	0	+	10544090	10552048	789624	10	409,84,174,233,65,131,79,77,120,183,	0,866,1040,2922,3272,4987,7980,8128,8288,8968,
#Partially deleted in new
chr19	10543916	10549034	chr19:10543916-10549034	0	+	10543916	10543916	8553170	5	404,158,174,415,131,	0,792,1040,2922,4987,
#Partially deleted in new
chr19	10543917	10553418	chr19:10543917-10553418	3	+	10544090	10553067	789624	10	408,84,174,277,65,131,79,77,120,534,	0,865,1039,2921,3271,4986,7979,8127,8287,8967,
#Partially deleted in new
chr19	10543917	10552324	chr19:10543917-10552324	0	+	10544090	10552048	789624	5	408,84,40,77,120,	0,865,1039,8127,8287,
#Partially deleted in new
chr19	10543970	10553418	chr19:10543970-10553418	0	+	10544090	10549032	789624	9	355,84,174,65,131,79,77,120,534,	0,812,986,3218,4933,7926,8074,8234,8914,
#Partially deleted in new
chr19	10544282	10547075	chr19:10544282-10547075	0	+	10544282	10547075	789624	3	43,348,237,	0,500,2556,
#Partially deleted in new
chr19	10544308	10552019	chr19:10544308-10552019	0	+	10544308	10552019	789624	5	17,84,174,131,123,	0,474,648,4595,7588,
#Partially deleted in new
chr19	10545009	10553418	chr19:10545009-10553418	0	+	10545009	10552048	789624	5	121,79,77,120,534,	0,6887,7035,7195,7875,
#Partially deleted in new
chr19	10545119	10552121	chr19:10545119-10552121	0	+	10545119	10552121	789624	6	11,244,65,131,79,77,	0,1719,2069,3784,6777,6925,
#Partially deleted in new
chr19	10549028	10553165	chr19:10549028-10553165	0	+	10549028	10553067	789624	4	6,225,120,281,	0,2868,3176,3856,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	10551032	10551092	chr19:10551032-10551092	3	-	10551032	10551032	8553170	1	60,	0,
#Partially deleted in new
chr19	10551935	10553144	chr19:10551935-10553144	0	+	10551935	10553067	789624	3	40,77,260,	0,109,949,
#Deleted in new
chr19	10552121	10552204	chr19:10552121-10552204	3	+	10552121	10552121	5263520	1	83,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr19	10553077	10566037	chr19:10553077-10566037	3	-	10553950	10566017	789624	19	1204,99,65,131,127,89,76,171,96,127,137,78,97,50,55,109,106,74,132,	0,2009,2207,4474,4691,4894,5086,6281,6535,6732,7234,7925,8091,8589,8713,9651,11851,12639,12828,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr19	10553084	10565997	chr19:10553084-10565997	0	-	10553084	10553084	8553170	17	1197,99,65,344,89,76,171,96,127,137,78,97,50,55,109,862,92,	0,2002,2200,4467,4887,5079,6274,6528,6725,7227,7918,8084,8582,8706,9644,11844,12821,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	10553090	10559936	chr19:10553090-10559936	0	-	10553090	10553090	8553170	9	1191,99,65,131,127,89,76,350,127,	0,1996,2194,4461,4678,4881,5073,6268,6719,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	10553212	10559928	chr19:10553212-10559928	0	-	10553212	10553212	8553170	2	395,121,	0,6595,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr19	10553575	10565971	chr19:10553575-10565971	0	-	10553575	10553575	8553170	18	706,99,65,344,89,76,171,96,127,137,78,97,50,55,109,106,74,66,	0,1511,1709,3976,4396,4588,5783,6037,6234,6736,7427,7593,8091,8215,9153,11353,12141,12330,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr19	10553590	10566020	chr19:10553590-10566020	0	-	10553590	10553590	8553170	18	691,99,65,131,127,89,76,171,96,127,137,78,97,50,55,109,106,304,	0,1496,1694,3961,4178,4381,4573,5768,6022,6219,6721,7412,7578,8076,8200,9138,11338,12126,
#Partially deleted in new
chr19	10555130	10559476	chr19:10555130-10559476	0	-	10555130	10555130	8553170	5	55,65,344,89,118,	0,154,2421,2841,4228,
#Partially deleted in new
chr19	10555308	10558221	chr19:10555308-10558221	0	-	10555308	10555308	8553170	3	41,344,250,	0,2243,2663,
#Partially deleted in new
chr19	10557551	10565990	chr19:10557551-10565990	0	-	10557551	10565990	789624	7	131,22,55,109,106,74,85,	0,217,4239,5177,7377,8165,8354,
#Partially deleted in new
chr19	10557557	10559830	chr19:10557557-10559830	0	-	10557557	10557557	8553170	6	125,127,89,76,171,218,	0,211,414,606,1801,2055,
#Partially deleted in new
chr19	10559809	10566031	chr19:10559809-10566031	0	-	10559809	10562775	789624	9	127,137,78,97,50,55,109,106,126,	0,502,1193,1359,1857,1981,2919,5119,6096,
#Partially deleted in new
chr19	10560371	10566010	chr19:10560371-10566010	0	-	10560371	10566010	789624	7	77,78,97,50,55,109,105,	0,631,797,1295,1419,2357,5534,
#Partially deleted in new
chr19	10560380	10566008	chr19:10560380-10566008	0	-	10560380	10560380	8553170	7	68,78,97,179,109,106,103,	0,622,788,1286,2348,4548,5525,
#Partially deleted in new
chr19	10561002	10566010	chr19:10561002-10566010	0	-	10561002	10561002	8553170	7	78,97,50,55,106,74,105,	0,166,664,788,3926,4714,4903,
#Partially deleted in new
chr19	10561232	10566008	chr19:10561232-10566008	0	-	10562765	10566008	789624	7	33,50,55,93,106,74,103,	0,434,558,1496,3696,4484,4673,
#Deleted in new
chr19	10566461	10568978	chr19:10566461-10568978	3	-	10567057	10568653	0	2	956,466,	0,2051,
#Deleted in new
chr19	10566600	10569059	chr19:10566600-10569059	1	-	10567057	10568653	0	3	817,156,113,	0,1912,2346,
#Partially deleted in new
chr19	10572670	10577314	chr19:10572670-10577314	0	-	10572827	10577314	789624	4	225,76,126,117,	0,1746,2233,4527,
#Partially deleted in new
chr19	10572670	10587315	chr19:10572670-10587315	1	-	10573065	10587231	789624	12	418,76,126,159,72,149,127,148,131,68,157,126,	0,1746,2233,4527,6221,7045,8595,8816,9077,10935,11243,14519,
#Partially deleted in new
chr19	10572671	10587314	chr19:10572671-10587314	3	-	10573065	10587231	789624	12	417,76,126,159,72,143,127,148,131,68,157,125,	0,1745,2232,4526,6220,7044,8594,8815,9076,10934,11242,14518,
#Partially deleted in new
chr19	10572688	10577231	chr19:10572688-10577231	0	-	10573065	10577231	789624	3	400,76,34,	0,1728,4509,
#Partially deleted in new
chr19	10574357	10577272	chr19:10574357-10577272	0	-	10574381	10577272	789624	3	135,126,75,	0,546,2840,
#Partially deleted in new
chr19	10577271	10587219	chr19:10577271-10587219	0	-	10577271	10587219	789624	7	85,72,143,127,148,131,30,	0,1620,2444,3994,4215,4476,9918,
#Partially deleted in new
chr19	10579735	10587250	chr19:10579735-10587250	0	-	10579735	10584034	789624	7	123,127,148,131,68,157,96,	0,1530,1751,2012,3870,4178,7419,
#Partially deleted in new
chr19	10581281	10587295	chr19:10581281-10587295	0	-	10581281	10587231	789624	5	111,148,131,465,106,	0,205,466,2324,5908,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	10581745	10587299	chr19:10581745-10587299	0	-	10584969	10587231	789624	5	133,68,157,75,110,	0,1860,2168,3224,5444,
#Partially deleted in new
chr19	10583559	10587219	chr19:10583559-10587219	0	-	10583559	10583559	8553170	2	511,30,	0,3630,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	10598000	10598965	chr19:10598000-10598965	7	-	10598000	10598000	16724991	1	965,	0,
#Partially deleted in new
chr19	10602456	10636496	chr19:10602456-10636496	0	+	10602456	10602456	8553170	12	105,49,85,111,61,124,84,113,132,96,353,174,	0,23796,28600,28818,29018,29169,29411,29587,32299,32517,32706,33866,
#Partially deleted in new
chr19	10602456	10631918	chr19:10602456-10631918	0	+	10602530	10631918	789624	7	105,49,85,111,61,124,51,	0,23796,28600,28818,29018,29169,29411,
#Partially deleted in new
chr19	10602509	10644550	chr19:10602509-10644550	1	+	10602530	10643385	789624	22	52,49,74,85,85,111,61,124,84,113,132,100,93,85,263,95,104,74,71,89,85,1272,	0,23743,25212,25410,28547,28765,28965,29116,29358,29534,32246,32464,32653,32921,33813,34152,35134,35346,35513,35717,39857,40769,
#Partially deleted in new
chr19	10625257	10644559	chr19:10625257-10644559	3	+	10625633	10643385	789624	22	413,49,74,85,85,111,61,124,84,113,132,100,93,85,263,95,104,74,71,89,85,1281,	0,995,2464,2662,5799,6017,6217,6368,6610,6786,9498,9716,9905,10173,11065,11404,12386,12598,12765,12969,17109,18021,
#Partially deleted in new
chr19	10625519	10631721	chr19:10625519-10631721	0	+	10625633	10631721	789624	6	151,49,85,111,61,96,	0,733,5537,5755,5955,6106,
#Partially deleted in new
chr19	10625519	10631704	chr19:10625519-10631704	0	+	10631672	10631704	789624	8	30,49,74,85,85,111,61,79,	0,733,2202,2400,5537,5755,5955,6106,
#Partially deleted in new
chr19	10625524	10644557	chr19:10625524-10644557	1	+	10625633	10643018	789624	22	146,49,74,85,85,111,61,124,84,113,132,100,93,85,263,95,104,74,71,89,85,1661,	0,728,2197,2395,5532,5750,5950,6101,6343,6519,9231,9449,9638,9906,10798,11137,12119,12331,12498,12702,16842,17372,
#Partially deleted in new
chr19	10625593	10635234	chr19:10625593-10635234	0	+	10625633	10634798	789624	7	77,49,74,85,132,100,72,	0,659,2128,2326,9162,9380,9569,
#Partially deleted in new
chr19	10625593	10632156	chr19:10625593-10632156	0	+	10625633	10627962	789624	9	77,49,85,85,111,61,124,84,113,	0,659,2326,5463,5681,5881,6032,6274,6450,
#Partially deleted in new
chr19	10631705	10637702	chr19:10631705-10637702	0	+	10631705	10631705	8553170	9	44,84,113,318,93,85,263,95,59,	0,162,338,3050,3457,3725,4617,4956,5938,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	10635803	10644555	chr19:10635803-10644555	0	+	10635803	10635803	8553170	8	782,95,104,74,71,89,85,1277,	0,858,1840,2052,2219,2423,6563,7475,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	10636925	10642385	chr19:10636925-10642385	0	+	10636925	10636925	8553170	7	217,30,98,74,71,89,19,	0,606,724,930,1097,1301,5441,
#Partially deleted in new
chr19	10637643	10643528	chr19:10637643-10643528	0	+	10637643	10643300	789624	5	104,74,89,85,250,	0,212,583,4723,5635,
#Partially deleted in new
chr19	10637743	10644130	chr19:10637743-10644130	0	+	10637743	10643018	789624	7	4,74,71,89,85,125,852,	0,112,279,483,4623,5153,5535,
#Partially deleted in new
chr19	10642335	10643398	chr19:10642335-10643398	0	+	10642335	10642335	8553170	2	116,120,	0,943,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	10651861	10653844	chr19:10651861-10653844	3	-	10651861	10651861	789624	1	1983,	0,
#Partially deleted in new
chr19	10654260	10692417	chr19:10654260-10692417	1	+	10670605	10689312	0	20	227,93,230,178,148,92,96,112,98,112,111,200,168,138,177,154,54,363,129,3239,	0,16255,16713,17097,22902,24352,24836,25555,26085,26758,26958,27732,28276,28864,29105,29375,29656,33085,34289,34918,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr19	10654303	10689847	chr19:10654303-10689847	0	+	10654303	10654303	8553170	20	184,93,230,178,148,92,96,112,98,112,974,168,138,177,154,54,61,363,129,669,	0,16212,16670,17054,22859,24309,24793,25512,26042,26715,26915,28233,28821,29062,29332,29613,30112,33042,34246,34875,
#Partially deleted in new
chr19	10654327	10685765	chr19:10654327-10685765	1	+	10670605	10684465	0	18	160,93,230,178,148,92,96,112,98,112,111,200,168,138,177,154,54,1350,	0,16188,16646,17030,22835,24285,24769,25488,26018,26691,26891,27665,28209,28797,29038,29308,29589,30088,
#Partially deleted in new
chr19	10654360	10684761	chr19:10654360-10684761	1	+	10670605	10684465	0	18	127,93,230,178,148,92,96,112,98,112,111,200,168,126,177,154,54,346,	0,16155,16613,16997,22802,24252,24736,25455,25985,26658,26858,27632,28176,28776,29005,29275,29556,30055,
#Partially deleted in new
chr19	10654381	10677236	chr19:10654381-10677236	0	+	10670605	10677236	789624	6	106,158,93,230,178,74,	0,12110,16134,16592,16976,22781,
#Partially deleted in new
chr19	10654937	10671423	chr19:10654937-10671423	0	+	10670605	10671423	789624	4	210,93,230,66,	0,15578,16036,16420,
#Partially deleted in new
chr19	10655023	10679831	chr19:10655023-10679831	0	+	10670605	10679831	789624	8	100,93,230,178,148,92,96,16,	0,15492,15950,16334,22139,23589,24073,24792,
#Partially deleted in new
chr19	10655495	10671203	chr19:10655495-10671203	0	+	10670605	10671203	789624	3	90,93,230,	0,15020,15478,
#Partially deleted in new
chr19	10670511	10681028	chr19:10670511-10681028	0	+	10670605	10677169	789624	7	97,230,148,96,112,98,10,	0,462,6651,8585,9304,9834,10507,
#Partially deleted in new
chr19	10670515	10679170	chr19:10670515-10679170	0	+	10670605	10677169	789624	5	93,230,148,92,74,	0,458,6647,8097,8581,
#Partially deleted in new
chr19	10670536	10685765	chr19:10670536-10685765	1	+	10670605	10684872	0	17	72,230,178,148,92,96,112,98,112,111,200,168,126,177,154,54,907,	0,437,821,6626,8076,8560,9279,9809,10482,10682,11456,12000,12600,12829,13099,13380,14322,
#Partially deleted in new
chr19	10670605	10689312	chr19:10670605-10689312	1	+	10670605	10689312	0	19	3,230,178,148,92,96,112,98,112,111,200,168,138,177,154,54,363,129,134,	0,368,752,6557,8007,8491,9210,9740,10413,10613,11387,11931,12519,12760,13030,13311,16740,17944,18573,
#Partially deleted in new
chr19	10670605	10689846	chr19:10670605-10689846	3	+	10670605	10689312	0	19	3,230,178,148,92,96,112,98,112,111,200,168,126,177,154,54,363,129,668,	0,368,752,6557,8007,8491,9210,9740,10413,10613,11387,11931,12531,12760,13030,13311,16740,17944,18573,
#Partially deleted in new
chr19	10670605	10685765	chr19:10670605-10685765	1	+	10670605	10683996	0	16	3,230,178,148,92,96,112,98,112,111,200,168,138,177,154,1849,	0,368,752,6557,8007,8491,9210,9740,10413,10613,11387,11931,12519,12760,13030,13311,
#Deleted in new
chr19	10670814	10671501	chr19:10670814-10671501	0	+	10670979	10671501	789624	2	389,144,	0,543,
#Partially deleted in new
chr19	10671036	10681306	chr19:10671036-10681306	0	+	10671036	10679115	789624	7	97,52,96,112,98,112,88,	0,7616,8060,8779,9309,9982,10182,
#Partially deleted in new
chr19	10671169	10681311	chr19:10671169-10681311	0	+	10671169	10679835	789624	7	34,178,148,96,112,112,93,	0,188,5993,7927,8646,9849,10049,
#Partially deleted in new
chr19	10671480	10682115	chr19:10671480-10682115	0	+	10671480	10681056	789624	8	55,148,92,96,112,112,111,123,	0,5682,7132,7616,8335,9538,9738,10512,
#Deleted in new
chr19	10677204	10681314	chr19:10677204-10681314	0	+	10677204	10679835	789624	6	106,96,112,98,112,96,	0,1892,2611,3141,3814,4014,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	10679184	10681556	chr19:10679184-10681556	0	+	10679184	10679184	8553170	4	8,112,112,338,	0,631,1834,2034,
#Deleted in new
chr19	10683517	10685163	chr19:10683517-10685163	0	+	10683517	10685028	789624	4	25,154,54,242,	0,118,399,1404,
#Deleted in new
chr19	10683755	10689492	chr19:10683755-10689492	0	+	10683755	10689312	789624	4	34,54,129,314,	0,161,4794,5423,
#Deleted in new
chr19	10685927	10689847	chr19:10685927-10689847	0	+	10685927	10685927	8553170	3	1781,129,669,	0,2622,3251,
#Deleted in new
chr19	10687604	10692398	chr19:10687604-10692398	0	+	10687604	10687604	8553170	3	510,129,3220,	0,945,1574,
#Partially deleted in new
chr19	10701429	10713345	chr19:10701429-10713345	0	+	10701429	10701429	8553170	9	274,69,139,79,116,468,110,88,228,	0,520,686,5872,6070,10731,11328,11523,11688,
#Partially deleted in new
chr19	10701450	10713365	chr19:10701450-10713365	3	+	10701460	10713270	789624	10	253,69,139,79,116,139,76,110,88,248,	0,499,665,5851,6049,10710,11102,11307,11502,11667,
#Partially deleted in new
chr19	10701453	10713437	chr19:10701453-10713437	0	+	10701460	10707613	789624	10	250,69,139,79,150,468,110,88,80,69,	0,496,662,5848,6012,10707,11304,11499,11664,11915,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	10701453	10709138	chr19:10701453-10709138	0	+	10701453	10701453	8553170	6	250,69,139,79,150,188,	0,496,662,5848,6012,7497,
#Partially deleted in new
chr19	10701453	10712256	chr19:10701453-10712256	0	+	10701453	10701453	8553170	5	250,305,79,116,96,	0,496,5848,6046,10707,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	10701465	10712397	chr19:10701465-10712397	0	+	10701465	10707349	789624	7	238,69,139,116,79,116,237,	0,484,650,5244,5836,6034,10695,
#Partially deleted in new
chr19	10701470	10707563	chr19:10701470-10707563	0	+	10701470	10707563	789624	5	233,69,94,79,64,	0,479,690,5831,6029,
#Partially deleted in new
chr19	10707305	10712255	chr19:10707305-10712255	0	+	10707305	10712255	789624	4	75,116,84,95,	0,194,1975,4855,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	10711039	10713364	chr19:10711039-10713364	0	+	10711039	10711039	8553170	4	1589,110,88,247,	0,1718,1913,2078,
#Deleted in new
chr19	10712562	10713359	chr19:10712562-10713359	0	+	10712562	10713270	789624	4	66,110,88,236,	0,195,390,561,
#Deleted in new
chr19	10712662	10713364	chr19:10712662-10713364	0	+	10712662	10712662	8553170	3	205,88,247,	0,290,455,
#Deleted in new
chr19	10712917	10713364	chr19:10712917-10713364	0	+	10712917	10712917	8553170	2	123,247,	0,200,
#Partially deleted in new
chr19	10718078	10831047	chr19:10718078-10831047	1	+	10718242	10831047	0	21	325,74,150,204,99,161,143,136,68,139,87,71,52,12,114,110,112,165,233,252,67,	0,41659,54400,57624,59039,64881,68485,75641,77293,77982,80407,84209,87837,90490,94185,101901,105709,106978,110957,112048,112902,
#Partially deleted in new
chr19	10718092	10831884	chr19:10718092-10831884	3	+	10718242	10831047	0	20	311,74,150,204,99,161,143,136,68,139,87,71,52,114,110,112,165,233,252,907,	0,41645,54386,57610,59025,64867,68471,75627,77279,77968,80393,84195,87823,94171,101887,105695,106964,110943,112034,112885,
#Partially deleted in new
chr19	10718130	10831903	chr19:10718130-10831903	1	+	10718242	10831047	0	21	273,74,150,204,99,161,143,136,68,139,87,71,52,12,114,110,112,165,233,252,926,	0,41607,54348,57572,58987,64829,68433,75589,77241,79249,80355,84157,87785,90438,94133,101849,105657,106926,110905,111996,112847,
#Partially deleted in new
chr19	10718162	10831895	chr19:10718162-10831895	1	+	10718242	10831047	0	21	241,74,150,204,99,161,143,136,68,139,87,71,52,12,114,110,112,165,233,252,918,	0,41575,54316,57540,58955,64797,68401,75557,77209,77898,80323,84125,87753,90406,94101,101817,105625,106894,110873,111964,112815,
#Partially deleted in new
chr19	10718207	10831424	chr19:10718207-10831424	1	+	10718242	10831047	0	20	196,74,150,204,99,161,143,136,68,139,87,71,52,114,110,112,165,233,252,447,	0,41530,54271,57495,58910,64752,68356,75512,77164,79172,80278,84080,87708,94056,101772,105580,106849,110828,111919,112770,
#Deleted in new
chr19	10718403	10718503	chr19:10718403-10718503	3	+	10718403	10718403	5263520	1	100,	0,
#Partially deleted in new
chr19	10718560	10777154	chr19:10718560-10777154	0	+	10775791	10777154	789624	5	86,74,150,204,37,	0,41177,53918,57142,58557,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	10755120	10759801	chr19:10755120-10759801	0	+	10755120	10755120	8553170	2	368,168,	0,4513,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	10763098	10772507	chr19:10763098-10772507	0	+	10763098	10763098	8553170	2	518,29,	0,9380,
#Partially deleted in new
chr19	10768552	10775815	chr19:10768552-10775815	0	+	10768552	10768552	8553170	3	310,150,113,	0,3926,7150,
#Partially deleted in new
chr19	10769288	10777202	chr19:10769288-10777202	0	+	10769288	10769288	8553170	4	158,150,204,85,	0,3190,6414,7829,
#Partially deleted in new
chr19	10777168	10795746	chr19:10777168-10795746	0	+	10777168	10777168	8553170	5	48,161,143,136,375,	0,5791,9395,16551,18203,
#Partially deleted in new
chr19	10780253	10780335	chr19:10780253-10780335	3	+	10780253	10780253	5263520	1	82,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	10781373	10793751	chr19:10781373-10793751	0	+	10781373	10781373	8553170	4	194,161,143,32,	0,1586,5190,12346,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	10781373	10783113	chr19:10781373-10783113	0	+	10781373	10781373	8553170	2	422,154,	0,1586,
#Partially deleted in new
chr19	10783015	10812300	chr19:10783015-10812300	0	+	10783015	10812300	789624	10	105,143,136,68,139,87,71,30,52,37,	0,3548,10704,12356,14364,15470,19272,20623,22900,29248,
#Deleted in new
chr19	10786429	10786741	chr19:10786429-10786741	0	+	10786429	10786429	8553170	1	312,	0,
#Deleted in new
chr19	10795715	10798562	chr19:10795715-10798562	0	+	10795715	10795715	8553170	2	484,77,	0,2770,
#Partially deleted in new
chr19	10798386	10802599	chr19:10798386-10802599	0	+	10798386	10798386	8553170	2	186,312,	0,3901,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	10808518	10831897	chr19:10808518-10831897	0	+	10808518	10808518	8553170	7	3859,110,112,165,233,252,920,	0,11461,15269,16538,20517,21608,22459,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	10809207	10824806	chr19:10809207-10824806	0	+	10809207	10809207	8553170	3	3170,110,1019,	0,10772,14580,
#Deleted in new
chr19	10817425	10817496	chr19:10817425-10817496	3	-	10817425	10817425	5263520	1	71,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	10823223	10833484	chr19:10823223-10833484	0	+	10823223	10823223	8553170	5	676,165,233,252,1181,	0,1833,5812,6903,9080,
#Deleted in new
chr19	10828972	10829035	chr19:10828972-10829035	3	+	10828972	10828972	5263520	1	63,	0,
#Deleted in new
chr19	10829111	10830534	chr19:10829111-10830534	0	+	10829111	10830382	789624	2	157,408,	0,1015,
#Deleted in new
chr19	10830337	10833488	chr19:10830337-10833488	0	+	10830337	10833460	789624	2	41,497,	0,2654,
#Partially deleted in new
chr19	10832437	10836290	chr19:10832437-10836290	3	-	10832994	10836191	789624	4	776,184,98,282,	0,2496,2818,3571,
#Partially deleted in new
chr19	10832686	10835004	chr19:10832686-10835004	0	-	10833202	10835004	789624	2	527,186,	0,2132,
#Partially deleted in new
chr19	10832812	10836318	chr19:10832812-10836318	1	-	10832936	10836191	789624	3	401,98,310,	0,2443,3196,
#Partially deleted in new
chr19	10832974	10836201	chr19:10832974-10836201	0	-	10835075	10836191	789624	3	239,184,193,	0,1959,3034,
#Partially deleted in new
chr19	10832984	10835632	chr19:10832984-10835632	1	-	10832994	10834963	789624	4	229,184,98,30,	0,1949,2271,2618,
#Partially deleted in new
chr19	10832984	10836249	chr19:10832984-10836249	0	-	10835075	10836191	789624	4	229,184,63,241,	0,1949,2306,3024,
#Partially deleted in new
chr19	10833050	10836195	chr19:10833050-10836195	0	-	10833050	10836191	789624	4	163,130,98,187,	0,1883,2205,2958,
#Partially deleted in new
chr19	10836574	10869470	chr19:10836574-10869470	3	+	10848508	10869367	789624	8	196,99,309,93,28,44,38,253,	0,11866,13684,19690,21741,23340,26595,32643,
#Deleted in new
chr19	10841838	10842250	chr19:10841838-10842250	7	+	10841838	10841838	16724991	1	412,	0,
#Partially deleted in new
chr19	10848401	10869790	chr19:10848401-10869790	1	+	10848508	10869367	789624	7	138,309,93,28,44,38,573,	0,1857,7863,9914,11513,14768,20816,
#Partially deleted in new
chr19	10848494	10860104	chr19:10848494-10860104	0	+	10848494	10848494	8553170	5	45,309,93,28,190,	0,1764,7770,9821,11420,
#Partially deleted in new
chr19	10871512	10923070	chr19:10871512-10923070	3	+	10871702	10921757	0	16	410,126,107,105,111,178,91,82,86,90,138,90,113,78,69,1456,	0,33438,36526,37590,40671,42364,44894,45183,48082,48364,48923,49146,49321,49537,49862,50102,
#Partially deleted in new
chr19	10871595	10909136	chr19:10871595-10909136	0	+	10871702	10909136	789624	3	327,107,34,	0,36443,37507,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr19	10871672	10921771	chr19:10871672-10921771	0	+	10871702	10908582	789624	16	250,126,107,198,105,111,178,91,82,86,90,138,90,113,78,397,	0,33278,36366,36877,37430,40511,42204,44734,45023,47922,48204,48763,48986,49161,49377,49702,
#Partially deleted in new
chr19	10871702	10922721	chr19:10871702-10922721	1	+	10871702	10921757	0	15	220,126,107,105,111,178,91,82,86,90,138,90,113,78,1107,	0,33248,36336,37400,40481,42174,44704,44993,47892,48174,48733,48956,49131,49347,49912,
#Partially deleted in new
chr19	10871827	10922777	chr19:10871827-10922777	0	+	10871827	10919881	789624	16	95,126,107,105,111,178,91,82,86,134,138,90,113,78,69,1163,	0,33123,36211,37275,40356,42049,44579,44868,47767,48005,48608,48831,49006,49222,49547,49787,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	10871852	10912252	chr19:10871852-10912252	0	+	10871852	10908582	789624	6	70,126,107,119,105,69,	0,33098,36186,36697,37250,40331,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	10918985	10920870	chr19:10918985-10920870	0	+	10918985	10918985	8553170	5	695,90,138,90,37,	0,891,1450,1673,1848,
#Deleted in new
chr19	10919928	10921900	chr19:10919928-10921900	0	+	10919928	10921757	789624	6	38,90,113,78,69,286,	0,730,905,1121,1446,1686,
#Deleted in new
chr19	10920666	10921934	chr19:10920666-10921934	0	+	10920666	10920666	8553170	3	82,294,320,	0,167,948,
#Partially deleted in new
chr19	10922184	10928681	chr19:10922184-10928681	3	-	10923290	10928410	789624	10	990,136,183,167,117,88,87,161,61,97,	0,1087,1310,1648,1891,3501,5445,5614,6195,6400,
#Partially deleted in new
chr19	10922767	10928653	chr19:10922767-10928653	1	-	10923290	10928410	789624	10	407,136,183,167,117,88,87,161,61,143,	0,504,727,1065,1308,2918,4862,5031,5612,5743,
#Deleted in new
chr19	10922769	10924117	chr19:10922769-10924117	0	-	10923290	10924117	789624	5	422,136,183,167,42,	0,502,725,1063,1306,
#Deleted in new
chr19	10922834	10924147	chr19:10922834-10924147	0	-	10923093	10924147	789624	5	340,136,183,148,72,	0,437,660,998,1241,
#Deleted in new
chr19	10923100	10923617	chr19:10923100-10923617	0	-	10923290	10923617	789624	2	307,123,	0,394,
#Partially deleted in new
chr19	10923271	10928585	chr19:10923271-10928585	1	-	10923290	10928410	789624	8	136,183,167,88,87,161,61,75,	0,223,561,2414,4358,4527,5108,5239,
#Partially deleted in new
chr19	10923351	10928657	chr19:10923351-10928657	0	-	10923351	10923904	789624	8	56,183,167,117,88,87,161,73,	0,143,481,724,2334,4278,4447,5233,
#Partially deleted in new
chr19	10923495	10928625	chr19:10923495-10928625	0	-	10923495	10923904	789624	7	182,167,117,88,140,61,41,	0,337,580,2190,4134,4884,5089,
#Partially deleted in new
chr19	10923832	10928512	chr19:10923832-10928512	0	-	10923832	10928410	789624	6	167,117,88,87,161,133,	0,243,1853,3797,3966,4547,
#Partially deleted in new
chr19	10923836	10928650	chr19:10923836-10928650	0	-	10923836	10928410	789624	6	163,117,88,161,61,66,	0,239,1849,3962,4543,4748,
#Partially deleted in new
chr19	10923841	10928550	chr19:10923841-10928550	0	-	10923841	10923841	8553170	6	351,88,87,161,61,40,	0,1844,3788,3957,4538,4669,
#Deleted in new
chr19	10927597	10928547	chr19:10927597-10928547	0	-	10927597	10927597	8553170	2	362,168,	0,782,
#Deleted in new
chr19	10928732	10930254	chr19:10928732-10930254	3	+	10928822	10929702	789624	2	184,1241,	0,281,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	10929620	10933515	chr19:10929620-10933515	0	+	10929620	10929702	789624	2	704,155,	0,3740,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	10932067	10933535	chr19:10932067-10933535	0	+	10932067	10932067	8553170	2	193,175,	0,1293,
#Partially deleted in new
chr19	10960931	11062279	chr19:10960931-11062279	1	+	10984151	11061816	789624	35	243,250,133,405,99,259,127,174,174,168,51,131,58,122,151,164,67,111,243,114,108,87,47,167,164,228,78,219,96,254,109,102,133,143,496,	0,23192,24341,25257,25973,26734,28385,30218,33896,35281,35562,42097,42408,46970,49449,52017,58025,58659,60793,62586,63399,64490,65368,66852,69798,72358,73191,73982,78526,80375,97323,97856,98821,99113,100852,
#Partially deleted in new
chr19	10960931	11062204	chr19:10960931-11062204	1	+	10984151	11061816	789624	35	243,250,133,405,99,259,127,174,174,168,51,131,58,122,151,164,67,111,243,114,108,87,47,167,164,228,78,219,96,263,109,102,133,143,421,	0,23192,24341,25257,25973,26734,28385,30218,33896,35281,35562,42097,42408,46970,49449,52017,58025,58659,60793,62586,63399,64490,65368,66852,69798,72358,73191,73982,78526,80366,97323,97856,98821,99113,100852,
#Partially deleted in new
chr19	10960931	11062468	chr19:10960931-11062468	1	+	10984151	11061816	0	34	243,250,133,405,99,259,127,174,174,168,51,131,58,122,151,164,67,111,243,114,108,87,47,167,164,228,78,219,263,109,102,133,143,685,	0,23192,24341,25257,25973,26734,28385,30218,33896,35281,35562,42097,42408,46970,49449,52017,58025,58659,60793,62586,63399,64490,65368,66852,69798,72358,73191,73982,80366,97323,97856,98821,99113,100852,
#Partially deleted in new
chr19	10960931	11062279	chr19:10960931-11062279	1	+	10984151	11061816	0	34	243,250,133,405,99,259,127,174,174,168,51,131,58,122,151,164,67,111,243,114,108,87,47,167,164,228,78,219,254,109,102,133,143,496,	0,23192,24341,25257,25973,26734,28385,30218,33896,35281,35562,42097,42408,46970,49449,52017,58025,58659,60793,62586,63399,64490,65368,66852,69798,72358,73191,73982,80375,97323,97856,98821,99113,100852,
#Partially deleted in new
chr19	10960956	11062263	chr19:10960956-11062263	1	+	10984151	11061816	789624	35	218,253,133,405,99,259,127,174,174,168,51,131,58,122,151,164,67,111,243,114,108,87,47,167,164,228,78,219,96,254,109,102,133,143,480,	0,23164,24316,25232,25948,26709,28360,30193,33871,35256,35537,42072,42383,46945,49424,51992,58000,58634,60768,62561,63374,64465,65343,66827,69773,72333,73166,73957,78501,80350,97298,97831,98796,99088,100827,
#Partially deleted in new
chr19	10960956	11062276	chr19:10960956-11062276	1	+	10984151	11061816	0	34	218,253,133,405,99,259,127,174,174,168,51,131,58,122,151,164,67,111,243,114,108,87,47,167,164,228,78,219,263,109,102,133,143,493,	0,23164,24316,25232,25948,26709,28360,30193,33871,35256,35537,42072,42383,46945,49424,51992,58000,58634,60768,62561,63374,64465,65343,66827,69773,72333,73166,73957,80341,97298,97831,98796,99088,100827,
#Partially deleted in new
chr19	10960956	11062276	chr19:10960956-11062276	1	+	10984151	11061816	0	34	218,253,133,405,99,259,127,174,174,168,51,131,58,122,151,164,67,111,243,114,108,87,47,167,164,228,78,219,254,109,102,133,143,493,	0,23164,24316,25232,25948,26709,28360,30193,33871,35256,35537,42072,42383,46945,49424,51992,58000,58634,60768,62561,63374,64465,65343,66827,69773,72333,73166,73957,80350,97298,97831,98796,99088,100827,
#Partially deleted in new
chr19	10961042	11062271	chr19:10961042-11062271	1	+	10984151	11061816	0	34	132,250,133,405,99,259,127,174,174,168,51,131,58,122,151,164,67,111,243,114,108,87,47,167,164,228,78,219,254,106,102,133,143,488,	0,23081,24230,25146,25862,26623,28274,30107,33785,35170,35451,41986,42297,46859,49338,51906,57914,58548,60682,62475,63288,64379,65257,66741,69687,72247,73080,73871,80264,97215,97745,98710,99002,100741,
#Partially deleted in new
chr19	10961080	11061816	chr19:10961080-11061816	1	+	10984151	11061816	0	35	94,163,250,133,405,99,259,127,174,174,168,51,131,58,122,151,164,67,111,243,114,108,87,47,167,164,228,78,219,263,109,102,133,143,33,	0,16572,23043,24192,25108,25824,26585,28236,30069,33747,35132,35413,41948,42259,46821,49300,51868,57876,58510,60644,62437,63250,64341,65219,66703,69649,72209,73042,73833,80217,97174,97707,98672,98964,100703,
#Boundary problem: need 35, got 0, diff 35, mapped 0.0
chr19	10961104	11061816	chr19:10961104-11061816	1	+	10984151	11061816	0	35	70,232,250,133,405,99,259,127,174,174,168,51,131,58,122,151,164,67,111,243,114,108,87,47,167,164,228,78,219,263,106,102,133,143,33,	0,22375,23019,24168,25084,25800,26561,28212,30045,33723,35108,35389,41924,42235,46797,49276,51844,57852,58486,60620,62413,63226,64317,65195,66679,69625,72185,73018,73809,80193,97153,97683,98648,98940,100679,
#Partially deleted in new
chr19	10961109	11062271	chr19:10961109-11062271	1	+	10984151	11061816	0	35	65,3,250,133,405,99,259,127,174,174,168,51,131,58,122,151,164,67,111,243,114,108,87,47,167,164,228,78,219,254,106,102,133,143,488,	0,4197,23014,24163,25079,25795,26556,28207,30040,33718,35103,35384,41919,42230,46792,49271,51839,57847,58481,60615,62408,63221,64312,65190,66674,69620,72180,73013,73804,80197,97148,97678,98643,98935,100674,
#Partially deleted in new
chr19	10961320	11062273	chr19:10961320-11062273	1	+	10984151	11061816	0	34	409,250,133,405,99,259,127,174,174,168,51,131,58,122,151,164,67,111,243,114,108,87,47,167,164,228,78,219,254,109,102,133,143,490,	0,22803,23952,24868,25584,26345,27996,29829,33507,34892,35173,41708,42019,46581,49060,51628,57636,58270,60404,62197,63010,64101,64979,66463,69409,71969,72802,73593,79986,96934,97467,98432,98724,100463,
#Partially deleted in new
chr19	10984151	11062282	chr19:10984151-11062282	1	+	10984151	11061816	789624	37	222,133,405,99,259,127,174,174,97,43,40,12,168,51,131,58,122,151,164,67,111,243,114,108,87,47,167,164,228,78,219,263,109,102,133,143,499,	0,1121,2037,2753,3514,5165,6998,10676,10965,11191,11352,11763,12061,12342,18877,19188,23750,26229,28797,34805,35439,37573,39366,40179,41270,42148,43632,46578,49138,49971,50762,57146,74103,74636,75601,75893,77632,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr19	10984278	11032666	chr19:10984278-11032666	0	+	10984278	11030971	789624	24	95,133,405,99,259,127,174,174,168,51,131,58,122,151,164,67,111,243,114,108,87,47,167,1937,	0,994,1910,2626,3387,5038,6871,10549,11934,12215,18750,19061,23623,26102,28670,34678,35312,37446,39239,40052,41143,42021,43505,46451,
#Partially deleted in new
chr19	10989424	11062271	chr19:10989424-11062271	0	+	10989424	11056262	789624	29	19,174,174,168,48,131,58,122,151,164,67,111,243,114,108,87,47,167,164,228,78,219,254,166,109,102,133,143,488,	0,1725,5403,6788,7072,13604,13915,18477,20956,23524,29532,30166,32300,34093,34906,35997,36875,38359,41305,43865,44698,45489,51882,66792,68830,69363,70328,70620,72359,
#Partially deleted in new
chr19	10991174	11062040	chr19:10991174-11062040	0	+	10991174	11061816	789624	27	149,174,168,48,131,58,122,151,164,67,111,243,114,108,87,47,167,164,228,78,219,263,106,102,133,143,257,	0,3653,5038,5322,11854,12165,16727,19206,21774,27782,28416,30550,32343,33156,34247,35125,36609,39555,42115,42948,43739,50123,67083,67613,68578,68870,70609,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr19	10994997	11032445	chr19:10994997-11032445	0	+	10994997	11012994	789624	16	4,168,48,131,58,122,164,67,111,243,114,108,87,47,167,1716,	0,1215,1499,8031,8342,12904,17951,23959,24593,26727,28520,29333,30424,31302,32786,35732,
#Partially deleted in new
chr19	10996263	11062140	chr19:10996263-11062140	0	+	10996263	11061816	789624	25	117,48,131,58,122,151,164,67,111,243,114,108,87,47,167,164,228,78,219,254,109,102,133,143,357,	0,233,6765,7076,11638,14117,16685,22693,23327,25461,27254,28067,29158,30036,31520,34466,37026,37859,38650,45043,61991,62524,63489,63781,65520,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr19	10996264	11040314	chr19:10996264-11040314	0	+	10996264	10996264	8553170	21	116,51,131,58,122,151,164,67,111,243,114,108,87,47,167,164,228,99,78,219,857,	0,229,6764,7075,11637,14116,16684,22692,23326,25460,27253,28066,29157,30035,31519,34465,37025,37502,37858,38649,43193,
#Partially deleted in new
chr19	10996273	11062028	chr19:10996273-11062028	0	+	10996273	11061816	789624	26	107,51,131,58,122,151,164,67,111,243,114,108,87,47,167,164,228,78,219,96,254,106,102,133,143,245,	0,220,6755,7066,11628,14107,16675,22683,23317,25451,27244,28057,29148,30026,31510,34456,37016,37849,38640,43184,45033,61984,62514,63479,63771,65510,
#Partially deleted in new
chr19	11003109	11027861	chr19:11003109-11027861	0	+	11003109	11027861	789624	11	50,58,164,67,111,243,114,108,87,47,78,	0,230,9839,15847,16481,18615,20408,21221,22312,23190,24674,
#Partially deleted in new
chr19	11003152	11008323	chr19:11003152-11008323	0	+	11003152	11003152	8553170	3	7,58,422,	0,187,4749,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr19	11010393	11062211	chr19:11010393-11062211	0	+	11010393	11027810	789624	21	138,164,67,111,243,114,108,87,47,219,164,228,94,78,219,254,109,102,133,143,428,	0,2555,8563,9197,11331,13124,13937,15028,15906,17338,20336,22896,23378,23729,24520,30913,47861,48394,49359,49651,51390,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	11010916	11016011	chr19:11010916-11016011	3	-	11010916	11010916	8553170	2	338,28,	0,5067,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	11011707	11012006	chr19:11011707-11012006	3	+	11011707	11011707	8553170	1	299,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr19	11012343	11061989	chr19:11012343-11061989	0	+	11012343	11012343	8553170	19	769,67,111,243,114,108,87,47,167,164,228,78,219,263,109,102,133,143,206,	0,6613,7247,9381,11174,11987,13078,13956,15440,18386,20946,21779,22570,28954,45911,46444,47409,47701,49440,
#Partially deleted in new
chr19	11018311	11023588	chr19:11018311-11023588	0	+	11018311	11018311	8553170	5	20,67,111,243,71,	0,645,1279,3413,5206,
#Partially deleted in new
chr19	11018869	11023561	chr19:11018869-11023561	0	+	11018869	11018869	8553170	4	154,111,243,44,	0,721,2855,4648,
#Partially deleted in new
chr19	11019013	11062276	chr19:11019013-11062276	0	+	11019013	11019013	8553170	17	688,243,114,108,87,47,167,164,228,78,219,254,109,102,133,143,493,	0,2711,4504,5317,6408,7286,8770,11716,14276,15109,15900,22293,39241,39774,40739,41031,42770,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	11019602	11040495	chr19:11019602-11040495	0	+	11019602	11025562	789624	13	99,243,114,108,198,47,167,164,228,99,78,219,1038,	0,2122,3915,4728,5819,6697,8181,11127,13687,14164,14520,15311,19855,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr19	11020580	11062276	chr19:11020580-11062276	0	+	11020580	11020580	8553170	16	1387,114,108,87,47,167,164,228,78,219,263,109,102,133,143,493,	0,2937,3750,4841,5719,7203,10149,12709,13542,14333,20717,37674,38207,39172,39464,41203,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	11030798	11079426	chr19:11030798-11079426	0	+	11030798	11079107	789624	11	95,228,99,78,219,254,106,102,133,143,430,	0,2491,2968,3324,4115,10508,27459,27989,28954,29246,48198,
#Partially deleted in new
chr19	11033486	11061915	chr19:11033486-11061915	0	+	11033486	11061816	789624	8	31,78,219,263,109,133,143,132,	0,636,1427,7811,24768,26266,26558,28297,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	11034122	11066122	chr19:11034122-11066122	0	+	11034122	11065201	789624	8	78,219,254,109,102,133,143,930,	0,791,7184,24132,24665,25630,25922,31070,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	11035021	11059227	chr19:11035021-11059227	0	+	11035021	11058982	789624	4	111,254,106,440,	0,6285,23236,23766,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	11040633	11062028	chr19:11040633-11062028	0	+	11040633	11040633	8553170	6	927,109,102,133,143,245,	0,17621,18154,19119,19411,21150,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	11040643	11062247	chr19:11040643-11062247	0	+	11040643	11040643	8553170	6	917,106,102,133,143,464,	0,17614,18144,19109,19401,21140,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	11041438	11059845	chr19:11041438-11059845	0	+	11041438	11047649	789624	5	122,201,109,102,93,	0,6156,16816,17349,18314,
#Partially deleted in new
chr19	11060460	11062269	chr19:11060460-11062269	0	+	11060460	11060460	8553170	2	42,527,	0,1282,
#Partially deleted in new
chr19	11089361	11132163	chr19:11089361-11132163	3	+	11089548	11131316	0	18	254,123,123,381,123,123,120,126,172,228,119,140,142,153,171,78,158,883,	0,10861,13302,15858,17203,18030,21290,22152,23916,24173,26732,27497,30730,31008,33812,38646,40151,41919,
#Partially deleted in new
chr19	11089461	11131525	chr19:11089461-11131525	1	+	11089548	11131518	789624	18	154,123,123,381,123,123,120,126,172,228,119,140,142,153,171,78,220,245,	0,10761,13202,15758,17103,17930,21190,22052,23816,24073,26632,27397,30630,30908,33712,38546,39989,41819,
#Partially deleted in new
chr19	11089462	11131484	chr19:11089462-11131484	1	+	11089548	11131316	0	16	153,123,123,123,120,126,172,228,119,140,142,153,171,78,158,204,	0,10760,13201,17929,21189,22051,23815,24072,26631,27396,30629,30907,33711,38545,40050,41818,
#Partially deleted in new
chr19	11089462	11131538	chr19:11089462-11131538	1	+	11089548	11131316	0	17	153,123,381,123,123,120,126,172,228,119,140,142,153,171,78,158,258,	0,10760,15757,17102,17929,21189,22051,23815,24072,26631,27396,30629,30907,33711,38545,40050,41818,
#Partially deleted in new
chr19	11089462	11131610	chr19:11089462-11131610	1	+	11089548	11131316	0	16	153,123,123,123,123,120,126,172,228,119,140,142,171,78,158,330,	0,10760,13201,17102,17929,21189,22051,23815,24072,26631,27396,30629,33711,38545,40050,41818,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	11089462	11104268	chr19:11089462-11104268	0	+	11089462	11089462	8553170	3	153,123,1605,	0,10760,13201,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	11089462	11100578	chr19:11089462-11100578	0	+	11089462	11089462	8553170	2	153,356,	0,10760,
#Partially deleted in new
chr19	11089477	11131812	chr19:11089477-11131812	1	+	11089548	11131316	0	18	138,123,123,381,123,123,120,126,172,228,119,140,142,153,171,78,158,526,	0,10745,13186,15742,17087,17914,21174,22036,23800,24057,26616,27381,30614,30892,33696,38530,40035,41809,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr19	11090598	11133816	chr19:11090598-11133816	0	+	11090598	11131316	789624	18	321,123,123,381,123,123,120,126,172,228,119,140,142,153,171,78,158,2536,	0,9624,12065,14621,15966,16793,20053,20915,22679,22936,25495,26260,29493,29771,32575,37409,38914,40682,
#Partially deleted in new
chr19	11105306	11113624	chr19:11105306-11113624	0	+	11105306	11113624	789624	6	294,123,123,126,172,90,	0,1258,2085,6207,7971,8228,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	11106355	11107515	chr19:11106355-11107515	0	+	11106355	11106355	8553170	2	332,124,	0,1036,
#Partially deleted in new
chr19	11110712	11113481	chr19:11110712-11113481	0	+	11110712	11110712	8553170	3	59,126,204,	0,801,2565,
#Partially deleted in new
chr19	11113370	11120406	chr19:11113370-11120406	0	+	11113370	11120177	789624	5	79,228,119,142,37,	0,164,2723,6721,6999,
#Partially deleted in new
chr19	11113473	11113534	chr19:11113473-11113534	3	+	11113473	11113473	5263520	1	61,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	11127546	11133521	chr19:11127546-11133521	0	+	11127546	11127546	8553170	2	108,427,	0,5548,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	11131519	11155782	chr19:11131519-11155782	0	-	11131519	11155776	789624	6	88,104,25,105,145,166,	0,5792,16350,16493,17574,24097,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	11145493	11155808	chr19:11145493-11155808	3	-	11147182	11155776	789624	5	1796,77,105,145,192,	0,2324,2519,3600,10123,
#Partially deleted in new
chr19	11145922	11155764	chr19:11145922-11155764	0	-	11146238	11155764	789624	5	357,77,105,145,148,	0,1895,2090,3171,9694,
#Partially deleted in new
chr19	11146021	11155765	chr19:11146021-11155765	0	-	11146337	11155765	789624	5	409,25,105,145,149,	0,1848,1991,3072,9595,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	11147080	11155807	chr19:11147080-11155807	0	-	11149106	11155776	789624	5	209,77,105,258,191,	0,737,932,2013,8536,
#Partially deleted in new
chr19	11147133	11155761	chr19:11147133-11155761	0	-	11147133	11155761	789624	3	156,77,145,	0,684,8483,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	11147598	11155769	chr19:11147598-11155769	0	-	11147791	11155769	789624	4	296,105,145,153,	0,414,1495,8018,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	11164266	11197521	chr19:11164266-11197521	3	-	11166557	11194511	0	13	2345,90,201,143,220,88,240,103,168,1212,116,199,37,	0,5610,5781,8714,10206,11635,12311,14078,14286,28564,30208,31355,33218,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	11164269	11175947	chr19:11164269-11175947	0	-	11166557	11175947	789624	5	2342,201,143,220,46,	0,5778,8711,10203,11632,
#Partially deleted in new
chr19	11166308	11170415	chr19:11166308-11170415	0	-	11166308	11166308	8553170	4	303,90,201,78,	0,3568,3739,4029,
#Partially deleted in new
chr19	11166557	11197547	chr19:11166557-11197547	1	-	11166557	11194511	0	13	54,90,201,143,220,88,240,127,168,1212,116,326,63,	0,3319,3490,6423,7915,9344,10020,11787,11995,26273,27917,28998,30927,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	11169675	11194511	chr19:11169675-11194511	1	-	11169852	11194511	0	10	291,201,143,220,88,240,103,168,1212,37,	0,372,3305,4797,6226,6902,8669,8877,23155,24799,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	11192431	11197791	chr19:11192431-11197791	0	-	11192431	11192431	8553170	3	1611,116,85,	0,2043,5275,
#Partially deleted in new
chr19	11192880	11195685	chr19:11192880-11195685	0	-	11192880	11193248	789624	2	560,64,	0,2741,
#Partially deleted in new
chr19	11193636	11195192	chr19:11193636-11195192	0	-	11193636	11194511	789624	3	406,116,401,	0,838,1155,
#Partially deleted in new
chr19	11193945	11197548	chr19:11193945-11197548	0	-	11193945	11194511	789624	4	97,116,265,64,	0,529,1610,3539,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	11194503	11197530	chr19:11194503-11197530	0	-	11194503	11194511	8553170	4	87,265,178,46,	0,1052,1546,2981,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	11194552	11196229	chr19:11194552-11196229	0	-	11194552	11194552	8553170	3	38,199,180,	0,1069,1497,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	11195622	11196227	chr19:11195622-11196227	0	-	11195622	11195622	8553170	2	259,178,	0,427,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	11196057	11197183	chr19:11196057-11197183	0	-	11196057	11196057	8553170	1	1126,	0,
#Partially deleted in new
chr19	11199294	11262452	chr19:11199294-11262452	3	-	11199496	11262440	789624	48	245,162,107,144,237,90,126,15,132,144,193,101,159,153,135,97,85,127,183,161,170,140,171,114,141,96,164,162,232,87,102,139,71,118,163,94,128,154,81,150,67,86,213,130,69,176,88,56,	0,1013,1421,1614,2594,3099,3289,4786,4905,9391,9616,12481,12698,13881,14980,15258,16092,16506,17619,17936,22556,22814,23440,23698,28042,29645,33908,36303,37051,37498,38161,38346,38750,38892,42750,43764,43963,44262,44507,46268,46517,48771,51579,52824,53187,53488,54344,63102,
#Partially deleted in new
chr19	11199294	11203313	chr19:11199294-11203313	0	-	11199294	11199294	8553170	7	245,162,107,144,237,322,32,	0,1013,1421,1614,2594,3099,3987,
#Partially deleted in new
chr19	11199302	11201963	chr19:11199302-11201963	0	-	11199317	11201963	789624	2	237,75,	0,2586,
#Partially deleted in new
chr19	11199496	11236497	chr19:11199496-11236497	0	-	11199496	11236497	789624	30	43,162,107,144,237,90,126,15,132,144,193,101,159,153,135,97,85,127,183,161,170,140,171,114,141,96,105,164,162,152,	0,811,1219,1412,2392,2897,3087,4584,4703,9189,9414,12279,12496,13679,14778,15056,15890,16304,17417,17734,22354,22612,23238,23496,27840,29443,32688,33706,36101,36849,
#Partially deleted in new
chr19	11202081	11208944	chr19:11202081-11208944	0	-	11202081	11208944	789624	5	44,90,132,144,34,	0,312,502,6604,6829,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	11203627	11216168	chr19:11203627-11216168	3	+	11203627	11203627	789624	3	238,299,32,	0,2182,12509,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	11206180	11208758	chr19:11206180-11208758	0	-	11206180	11206180	8553170	2	207,73,	0,2505,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	11208194	11208702	chr19:11208194-11208702	3	+	11208194	11208194	8553170	1	508,	0,
#Partially deleted in new
chr19	11215610	11217296	chr19:11215610-11217296	0	-	11215610	11215610	8553170	3	317,183,66,	0,1303,1620,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	11216675	11217268	chr19:11216675-11217268	0	-	11216675	11216675	8553170	2	421,38,	0,555,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	11221082	11221573	chr19:11221082-11221573	3	+	11221082	11221082	8553170	1	491,	0,
#Deleted in new
chr19	11221985	11222324	chr19:11221985-11222324	0	-	11221985	11221985	8553170	2	35,216,	0,123,
#Partially deleted in new
chr19	11227336	11238290	chr19:11227336-11238290	0	-	11227336	11238290	789624	11	141,96,93,164,162,232,87,102,139,71,104,	0,1603,1961,5866,8261,9009,9456,10119,10304,10708,10850,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	11228839	11229332	chr19:11228839-11229332	0	-	11228839	11228839	8553170	2	196,35,	0,458,
#Partially deleted in new
chr19	11229000	11235754	chr19:11229000-11235754	0	-	11229000	11235754	789624	5	35,93,105,164,157,	0,297,3184,4202,6597,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	11235898	11238921	chr19:11235898-11238921	0	-	11235898	11235898	8553170	1	3023,	0,
#Partially deleted in new
chr19	11237449	11241943	chr19:11237449-11241943	3	+	11239637	11241687	789624	6	125,225,317,162,110,284,	0,607,2168,2685,3995,4210,
#Partially deleted in new
chr19	11237501	11241818	chr19:11237501-11241818	1	+	11240134	11241687	789624	4	73,162,110,159,	0,2633,3943,4158,
#Partially deleted in new
chr19	11239618	11241943	chr19:11239618-11241943	1	+	11239637	11241687	789624	4	316,162,110,284,	0,516,1826,2041,
#Partially deleted in new
chr19	11239896	11241943	chr19:11239896-11241943	0	+	11239896	11241687	789624	3	38,110,284,	0,1548,1763,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	11247257	11262481	chr19:11247257-11262481	0	-	11247257	11247257	8553170	4	894,2085,88,85,	0,3616,6381,15139,
#Deleted in new
chr19	11252403	11253667	chr19:11252403-11253667	0	-	11252403	11252403	8553170	3	147,176,29,	0,379,1235,
#Deleted in new
chr19	11252881	11254048	chr19:11252881-11254048	0	-	11252881	11252881	8553170	2	77,410,	0,757,
#Partially deleted in new
chr19	11296138	11306603	chr19:11296138-11306603	1	+	11296297	11306603	789624	5	228,198,75,108,33,	0,2003,2733,5062,10432,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	11296147	11326996	chr19:11296147-11326996	3	+	11296297	11326844	789624	7	219,198,75,108,153,84,203,	0,1994,2724,5053,10456,15991,30646,
#Partially deleted in new
chr19	11296159	11315967	chr19:11296159-11315967	1	+	11296297	11315838	789624	6	207,198,108,153,84,177,	0,1982,5041,10444,15979,19631,
#Partially deleted in new
chr19	11296166	11315969	chr19:11296166-11315969	1	+	11296297	11315838	789624	7	200,198,75,108,153,84,179,	0,1975,2705,5034,10437,15972,19624,
#Partially deleted in new
chr19	11296168	11315967	chr19:11296168-11315967	0	+	11296297	11306603	789624	7	198,198,75,108,186,84,177,	0,1973,2703,5032,10402,15970,19622,
#Partially deleted in new
chr19	11300776	11324441	chr19:11300776-11324441	3	-	11300776	11300776	8553170	3	460,146,49,	0,5902,23616,
#Partially deleted in new
chr19	11306723	11312322	chr19:11306723-11312322	0	+	11306723	11307945	789624	3	33,200,184,	0,1138,5415,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	11322045	11339668	chr19:11322045-11339668	1	-	11325397	11337399	0	5	3540,125,119,289,200,	0,13401,13619,15126,17423,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	11322155	11324195	chr19:11322155-11324195	3	+	11322155	11322155	8553170	2	827,79,	0,1961,
#Partially deleted in new
chr19	11325338	11346270	chr19:11325338-11346270	3	-	11325397	11337399	0	5	247,125,119,289,144,	0,10108,10326,11833,20788,
#Partially deleted in new
chr19	11342775	11346305	chr19:11342775-11346305	1	-	11342814	11345619	789624	4	345,164,109,298,	0,2476,2744,3232,
#Partially deleted in new
chr19	11342775	11346210	chr19:11342775-11346210	1	-	11342814	11345332	789624	3	345,164,84,	0,2476,3351,
#Partially deleted in new
chr19	11342775	11346300	chr19:11342775-11346300	1	-	11342814	11345619	789624	4	345,164,109,174,	0,2476,2744,3351,
#Partially deleted in new
chr19	11342777	11346046	chr19:11342777-11346046	1	-	11342814	11345619	789624	3	343,164,527,	0,2474,2742,
#Partially deleted in new
chr19	11342777	11346055	chr19:11342777-11346055	0	-	11342777	11342777	8553170	2	343,804,	0,2474,
#Partially deleted in new
chr19	11342777	11346268	chr19:11342777-11346268	1	-	11342814	11345619	789624	4	343,164,109,61,	0,2474,2742,3430,
#Partially deleted in new
chr19	11342777	11346285	chr19:11342777-11346285	1	-	11342814	11345619	789624	4	343,164,218,278,	0,2474,2742,3230,
#Partially deleted in new
chr19	11342778	11346406	chr19:11342778-11346406	3	-	11342814	11345619	789624	4	342,164,109,73,	0,2473,2741,3555,
#Partially deleted in new
chr19	11342778	11346271	chr19:11342778-11346271	1	-	11342814	11345619	789624	4	342,164,218,64,	0,2473,2741,3429,
#Partially deleted in new
chr19	11342784	11346248	chr19:11342784-11346248	1	-	11342814	11345619	789624	4	336,164,218,122,	0,2467,2735,3342,
#Partially deleted in new
chr19	11342809	11346256	chr19:11342809-11346256	0	-	11342809	11342809	8553170	2	291,1019,	0,2428,
#Partially deleted in new
chr19	11342841	11346327	chr19:11342841-11346327	0	-	11342841	11345332	789624	3	279,164,120,	0,2410,3366,
#Partially deleted in new
chr19	11342849	11346255	chr19:11342849-11346255	0	-	11342849	11345619	789624	3	271,109,48,	0,2670,3358,
#Partially deleted in new
chr19	11342872	11346518	chr19:11342872-11346518	0	-	11342872	11345619	789624	4	248,164,109,98,	0,2379,2647,3548,
#Partially deleted in new
chr19	11343063	11346305	chr19:11343063-11346305	0	-	11343063	11345619	789624	4	57,164,109,298,	0,2188,2456,2944,
#Partially deleted in new
chr19	11344683	11346298	chr19:11344683-11346298	0	+	11344683	11344683	8553170	3	72,202,281,	0,496,1334,
#Partially deleted in new
chr19	11344694	11346466	chr19:11344694-11346466	0	+	11344694	11344694	8553170	3	61,202,505,	0,485,1267,
#Deleted in new
chr19	11345251	11346262	chr19:11345251-11346262	0	-	11345251	11345619	789624	3	164,109,120,	0,268,891,
#Partially deleted in new
chr19	11345300	11354944	chr19:11345300-11354944	3	+	11346606	11354877	789624	13	81,242,145,34,89,82,196,68,77,122,83,117,72,	0,661,1182,4353,4637,4817,5507,6605,6756,8150,8491,9279,9572,
#Partially deleted in new
chr19	11346504	11354943	chr19:11346504-11354943	1	+	11346606	11354877	789624	11	123,34,89,82,196,68,77,122,83,117,71,	0,3149,3433,3613,4303,5401,5552,6946,7287,8075,8368,
#Partially deleted in new
chr19	11346504	11350868	chr19:11346504-11350868	0	+	11346606	11349986	789624	5	130,34,89,82,61,	0,3149,3433,3613,4303,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	11346530	11351486	chr19:11346530-11351486	0	+	11346530	11346530	8553170	5	97,34,89,82,679,	0,3123,3407,3587,4277,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	11346530	11352499	chr19:11346530-11352499	0	+	11346530	11346530	8553170	7	104,34,89,82,196,68,443,	0,3123,3407,3587,4277,5375,5526,
#Partially deleted in new
chr19	11346532	11351973	chr19:11346532-11351973	0	+	11349951	11351973	789624	5	92,89,82,196,68,	0,3405,3585,4275,5373,
#Partially deleted in new
chr19	11346539	11351940	chr19:11346539-11351940	0	+	11349951	11351940	789624	6	88,112,89,82,196,35,	0,3036,3398,3578,4268,5366,
#Partially deleted in new
chr19	11346539	11353827	chr19:11346539-11353827	0	+	11346606	11349986	789624	6	95,34,89,82,122,36,	0,3114,3398,3578,6911,7252,
#Partially deleted in new
chr19	11346555	11350979	chr19:11346555-11350979	0	+	11349951	11350979	789624	5	79,112,89,82,172,	0,3020,3382,3562,4252,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	11346564	11351486	chr19:11346564-11351486	0	+	11346564	11346564	8553170	5	70,34,89,82,679,	0,3089,3373,3553,4243,
#Partially deleted in new
chr19	11346571	11350989	chr19:11346571-11350989	0	+	11346606	11349061	789624	6	56,118,34,89,82,182,	0,2394,3082,3366,3546,4236,
#Partially deleted in new
chr19	11346580	11349693	chr19:11346580-11349693	0	+	11346580	11346580	8553170	2	54,728,	0,2385,
#Partially deleted in new
chr19	11349662	11354681	chr19:11349662-11354681	0	+	11349662	11354681	789624	7	25,89,82,77,122,83,102,	0,275,455,2394,3788,4129,4917,
#Partially deleted in new
chr19	11350884	11354699	chr19:11350884-11354699	0	+	11350884	11350884	8553170	3	119,424,120,	0,2566,3695,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	11351747	11353749	chr19:11351747-11353749	0	+	11351747	11351747	8553170	2	250,372,	0,1630,
#Partially deleted in new
chr19	11351792	11353737	chr19:11351792-11353737	0	+	11351792	11351792	8553170	3	181,77,287,	0,264,1658,
#Partially deleted in new
chr19	11351931	11354944	chr19:11351931-11354944	0	+	11351931	11351931	8553170	5	42,77,424,117,72,	0,125,1519,2648,2941,
#Partially deleted in new
chr19	11351961	11354943	chr19:11351961-11354943	0	+	11351961	11354752	789624	5	12,77,122,83,364,	0,95,1489,1830,2618,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	11355385	11365698	chr19:11355385-11365698	3	+	11357673	11364379	789624	10	187,175,80,189,136,272,177,107,52,1352,	0,1416,2274,4146,4435,5831,7127,8327,8775,8961,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	11355423	11359719	chr19:11355423-11359719	0	+	11357673	11359719	789624	4	149,175,121,188,	0,1378,2195,4108,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	11355430	11359708	chr19:11355430-11359708	0	+	11355430	11355430	8553170	4	142,175,80,238,	0,1371,2229,4040,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	11355465	11359838	chr19:11355465-11359838	0	+	11357673	11359838	789624	5	107,175,121,114,18,	0,1336,2153,4141,4355,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	11355497	11365694	chr19:11355497-11365694	1	+	11357673	11364690	789624	10	75,175,80,114,136,272,177,123,52,1348,	0,1304,2162,4109,4323,5719,7015,8215,8663,8849,
#Partially deleted in new
chr19	11357695	11359894	chr19:11357695-11359894	0	+	11357695	11357695	8553170	2	44,363,	0,1836,
#Partially deleted in new
chr19	11359722	11363768	chr19:11359722-11363768	0	+	11359722	11359722	8553170	4	234,272,177,56,	0,1494,2790,3990,
#Partially deleted in new
chr19	11361265	11364215	chr19:11361265-11364215	0	+	11361265	11361265	8553170	3	223,177,503,	0,1247,2447,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	11368122	11374935	chr19:11368122-11374935	3	-	11368122	11368122	8553170	3	173,184,325,	0,3565,6488,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	11374684	11376951	chr19:11374684-11376951	3	+	11374743	11376016	789624	2	245,1439,	0,828,
#Partially deleted in new
chr19	11377204	11384312	chr19:11377204-11384312	3	-	11377983	11384207	0	8	1391,88,88,154,158,176,136,220,	0,1486,3679,3851,4487,4725,5892,6888,
#Partially deleted in new
chr19	11377624	11384312	chr19:11377624-11384312	1	-	11378618	11384207	0	7	1154,88,154,158,176,136,220,	0,3259,3431,4067,4305,5472,6468,
#Partially deleted in new
chr19	11377762	11384342	chr19:11377762-11384342	0	-	11377762	11377762	789624	8	833,88,88,154,158,176,386,250,	0,928,3121,3293,3929,4167,5084,6330,
#Partially deleted in new
chr19	11377865	11384284	chr19:11377865-11384284	0	-	11382099	11384207	789624	9	730,88,88,154,158,176,103,136,192,	0,825,3018,3190,3826,4064,4981,5231,6227,
#Partially deleted in new
chr19	11377865	11384284	chr19:11377865-11384284	0	-	11381172	11384207	789624	9	730,88,88,258,158,176,136,105,192,	0,825,3018,3190,3826,4064,5231,5565,6227,
#Partially deleted in new
chr19	11377873	11384284	chr19:11377873-11384284	0	-	11382099	11384207	789624	9	722,88,88,154,158,176,136,136,192,	0,817,3010,3182,3818,4056,4973,5223,6219,
#Partially deleted in new
chr19	11378255	11381238	chr19:11378255-11381238	0	-	11378255	11378255	8553170	2	523,355,	0,2628,
#Partially deleted in new
chr19	11380883	11383454	chr19:11380883-11383454	0	-	11380883	11380883	8553170	6	88,154,158,176,386,24,	0,172,808,1046,1963,2547,
#Partially deleted in new
chr19	11384340	11419273	chr19:11384340-11419273	0	-	11406735	11419273	789624	19	304,115,153,97,69,96,122,33,87,57,85,104,216,143,202,54,224,114,28,	0,12903,13104,15514,15699,15861,17670,17874,18114,18309,20806,20982,22078,22381,31606,32273,32495,34330,34905,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr19	11384511	11419310	chr19:11384511-11419310	0	-	11416022	11419278	789624	20	133,115,153,97,69,96,122,33,87,57,85,104,216,143,192,212,49,224,114,65,	0,12732,12933,15343,15528,15690,17499,17703,17943,18138,20635,20811,21907,22210,26741,31425,32102,32324,34159,34734,
#Partially deleted in new
chr19	11394055	11411270	chr19:11394055-11411270	0	-	11394055	11394055	8553170	13	465,115,153,97,69,96,531,57,85,104,216,143,18,	0,3188,3389,5799,5984,6146,7955,8594,11091,11267,12363,12666,17197,
#Partially deleted in new
chr19	11394056	11419342	chr19:11394056-11419342	3	-	11394401	11419278	789624	19	464,115,153,97,69,96,122,33,87,57,85,104,216,143,212,54,224,114,97,	0,3187,3388,5798,5983,6145,7954,8158,8398,8593,11090,11266,12362,12665,21880,22557,22779,24614,25189,
#Partially deleted in new
chr19	11394063	11397546	chr19:11394063-11397546	0	-	11394063	11394063	8553170	4	457,73,115,102,	0,542,3180,3381,
#Partially deleted in new
chr19	11394324	11419328	chr19:11394324-11419328	1	-	11394401	11419278	789624	19	196,115,153,115,69,96,122,33,87,57,85,104,216,143,212,54,224,114,83,	0,2919,3120,5530,5715,5877,7686,7890,8130,8325,10822,10998,12094,12397,21612,22289,22511,24346,24921,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	11397243	11397769	chr19:11397243-11397769	0	-	11397243	11397243	8553170	2	115,325,	0,201,
#Partially deleted in new
chr19	11402077	11406602	chr19:11402077-11406602	0	-	11405183	11406602	789624	6	55,33,87,57,85,184,	0,137,377,572,3069,4341,
#Partially deleted in new
chr19	11402227	11419314	chr19:11402227-11419314	0	-	11402227	11402227	8553170	9	479,85,104,216,110,54,224,114,69,	0,2919,3095,4191,4494,14386,14608,16443,17018,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	11405211	11406943	chr19:11405211-11406943	0	-	11405211	11405211	8553170	4	20,104,216,222,	0,111,1207,1510,
#Partially deleted in new
chr19	11406735	11419317	chr19:11406735-11419317	0	-	11406735	11406735	8553170	5	129,212,446,114,72,	0,9201,9878,11935,12510,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	11406823	11416234	chr19:11406823-11416234	0	-	11406823	11406823	8553170	3	41,192,288,	0,4429,9123,
#Partially deleted in new
chr19	11415936	11418573	chr19:11415936-11418573	0	-	11415936	11418545	789624	4	212,54,224,67,	0,677,899,2570,
#Partially deleted in new
chr19	11416006	11416830	chr19:11416006-11416830	0	-	11416006	11416006	8553170	3	142,54,68,	0,607,756,
#Partially deleted in new
chr19	11416038	11419314	chr19:11416038-11419314	0	-	11416038	11419278	789624	5	76,54,224,114,69,	0,575,797,2632,3207,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	11416462	11419305	chr19:11416462-11419305	0	-	11416462	11416462	8553170	3	597,114,60,	0,2208,2783,
#Partially deleted in new
chr19	11416849	11419317	chr19:11416849-11419317	0	-	11416849	11416849	8553170	3	210,222,72,	0,1821,2396,
#Partially deleted in new
chr19	11420603	11435104	chr19:11420603-11435104	3	-	11420834	11435016	789624	13	344,85,156,157,161,153,123,126,102,168,78,122,332,	0,524,1073,1867,2097,3273,5540,5842,6079,6269,10095,10295,14169,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	11420603	11435178	chr19:11420603-11435178	0	-	11431183	11435016	789624	14	344,85,156,157,161,153,123,126,102,168,78,320,69,406,	0,524,1073,1867,2097,3273,5540,5842,6079,6269,10095,10295,13857,14169,
#Partially deleted in new
chr19	11420604	11435782	chr19:11420604-11435782	1	-	11420834	11426911	789624	13	343,85,156,157,161,153,123,126,102,168,78,122,93,	0,523,1072,1866,2096,3272,5539,5841,6078,6268,10094,10294,15085,
#Partially deleted in new
chr19	11420604	11435121	chr19:11420604-11435121	1	-	11420834	11435016	789624	11	343,85,156,157,161,153,123,126,168,122,349,	0,523,1072,1866,2096,3272,5539,5841,6268,10294,14168,
#Partially deleted in new
chr19	11430558	11434899	chr19:11430558-11434899	0	-	11430558	11430558	8553170	3	218,122,127,	0,340,4214,
#Partially deleted in new
chr19	11435287	11450965	chr19:11435287-11450965	1	+	11436117	11449412	789624	19	156,62,156,117,96,58,118,130,85,79,87,180,67,70,90,75,100,163,320,	0,357,753,1101,2588,2779,5952,7098,10101,10984,11786,12151,12435,12934,13252,13626,13788,13978,15358,
#Deleted in new
chr19	11435400	11436495	chr19:11435400-11436495	0	+	11436117	11436495	789624	3	306,156,107,	0,640,988,
#Partially deleted in new
chr19	11435618	11442422	chr19:11435618-11442422	0	+	11436117	11442422	789624	7	88,111,117,96,58,118,37,	0,467,770,2257,2448,5621,6767,
#Partially deleted in new
chr19	11435623	11437884	chr19:11435623-11437884	0	+	11436117	11437884	789624	3	83,465,9,	0,417,2252,
#Partially deleted in new
chr19	11435626	11441311	chr19:11435626-11441311	0	+	11436117	11441311	789624	6	46,156,117,96,58,72,	0,414,762,2249,2440,5613,
#Partially deleted in new
chr19	11435629	11441105	chr19:11435629-11441105	0	+	11435629	11435629	8553170	6	81,156,117,96,58,37,	0,411,759,2246,2437,5439,
#Partially deleted in new
chr19	11435631	11441252	chr19:11435631-11441252	0	+	11435631	11435631	8553170	6	75,156,190,96,58,13,	0,409,902,2244,2435,5608,
#Partially deleted in new
chr19	11435634	11450968	chr19:11435634-11450968	1	+	11436117	11449412	789624	18	76,156,117,96,58,118,130,85,79,87,180,97,70,90,75,100,163,323,	0,406,754,2241,2432,5605,6751,9754,10637,11439,11804,12058,12587,12905,13279,13441,13631,15011,
#Partially deleted in new
chr19	11435739	11441321	chr19:11435739-11441321	0	+	11436117	11441321	789624	6	69,156,117,96,58,82,	0,301,649,2136,2327,5500,
#Partially deleted in new
chr19	11435744	11450867	chr19:11435744-11450867	3	+	11436117	11449412	789624	17	452,117,96,58,118,130,85,79,87,180,67,70,90,75,100,163,222,	0,644,2131,2322,5495,6641,9644,10527,11329,11694,11978,12477,12795,13169,13331,13521,14901,
#Partially deleted in new
chr19	11436117	11450940	chr19:11436117-11450940	1	+	11436117	11449412	789624	17	79,117,96,58,118,130,85,79,87,159,97,70,90,75,100,163,295,	0,271,1758,1949,5122,6268,9271,10154,10956,11321,11575,12104,12422,12796,12958,13148,14528,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	11442406	11445846	chr19:11442406-11445846	0	+	11442406	11442406	8553170	2	109,458,	0,2982,
#Partially deleted in new
chr19	11446315	11448018	chr19:11446315-11448018	0	+	11446315	11446315	8553170	4	35,87,180,296,	0,758,1123,1407,
#Partially deleted in new
chr19	11447064	11447940	chr19:11447064-11447940	0	+	11447064	11447064	8553170	2	96,502,	0,374,
#Partially deleted in new
chr19	11447120	11448405	chr19:11447120-11448405	0	+	11447120	11447120	8553170	4	40,180,97,184,	0,318,572,1101,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	11447564	11450968	chr19:11447564-11450968	0	+	11447564	11449412	789624	8	54,67,70,90,75,100,617,540,	0,158,657,975,1349,1511,1701,2864,
#Partially deleted in new
chr19	11447933	11449422	chr19:11447933-11449422	0	+	11447933	11447933	8553170	5	358,90,75,100,157,	0,606,980,1142,1332,
#Partially deleted in new
chr19	11447997	11449163	chr19:11447997-11449163	0	+	11447997	11447997	8553170	3	632,75,88,	0,916,1078,
#Partially deleted in new
chr19	11448536	11449268	chr19:11448536-11449268	0	+	11448536	11448536	8553170	3	93,262,3,	0,377,729,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	11449778	11450967	chr19:11449778-11450967	0	+	11449778	11449778	8553170	2	209,382,	0,807,
#Partially deleted in new
chr19	11451325	11481033	chr19:11451325-11481033	3	-	11454525	11480608	789624	7	3552,39,226,154,104,220,434,	0,5784,6735,7132,14846,15282,29274,
#Partially deleted in new
chr19	11454402	11480625	chr19:11454402-11480625	1	-	11454525	11480608	789624	7	454,39,226,154,104,220,26,	0,2707,3658,4055,11769,12205,26197,
#Partially deleted in new
chr19	11466175	11480697	chr19:11466175-11480697	0	-	11466175	11480608	789624	3	49,220,98,	0,432,14424,
#Partially deleted in new
chr19	11466239	11505698	chr19:11466239-11505698	3	-	11466732	11505698	789624	5	36,220,216,44,211,	0,368,29710,32056,39248,
#Deleted in new
chr19	11480252	11481046	chr19:11480252-11481046	0	-	11480252	11480252	8553170	2	19,447,	0,347,
#Partially deleted in new
chr19	11483426	11505923	chr19:11483426-11505923	3	-	11483681	11505786	789624	9	433,100,115,112,172,612,216,44,436,	0,615,2229,3342,3560,3865,12523,14869,22061,
#Partially deleted in new
chr19	11483426	11486832	chr19:11483426-11486832	0	-	11483448	11486832	789624	4	433,62,115,64,	0,653,2229,3342,
#Partially deleted in new
chr19	11483440	11486830	chr19:11483440-11486830	0	-	11483803	11486830	789624	3	419,100,62,	0,601,3328,
#Partially deleted in new
chr19	11483681	11505821	chr19:11483681-11505821	0	-	11483681	11483681	8553170	8	178,100,115,112,917,216,44,334,	0,360,1974,3087,3305,12268,14614,21806,
#Partially deleted in new
chr19	11484011	11487296	chr19:11484011-11487296	0	-	11484037	11487296	789624	5	130,115,112,172,5,	0,1644,2757,2975,3280,
#Deleted in new
chr19	11495543	11495622	chr19:11495543-11495622	3	-	11495543	11495543	5263520	1	79,	0,
#Partially deleted in new
chr19	11495724	11505500	chr19:11495724-11505500	0	-	11500724	11505500	789624	4	441,44,138,13,	0,2571,4953,9763,
#Partially deleted in new
chr19	11496035	11505184	chr19:11496035-11505184	0	-	11496035	11496035	8553170	3	130,44,535,	0,2260,8614,
#Partially deleted in new
chr19	11505915	11529174	chr19:11505915-11529174	3	-	11506183	11519170	789624	8	513,106,149,58,224,418,119,113,	0,1541,1786,2075,7140,7888,13159,23146,
#Partially deleted in new
chr19	11505928	11529137	chr19:11505928-11529137	1	-	11507467	11519170	789624	7	500,106,58,224,418,119,76,	0,1528,2062,7127,7875,13146,23133,
#Partially deleted in new
chr19	11505928	11529096	chr19:11505928-11529096	1	-	11507467	11519170	789624	5	500,106,58,119,35,	0,1528,2062,13146,23133,
#Partially deleted in new
chr19	11505957	11513168	chr19:11505957-11513168	0	-	11507990	11513168	789624	6	471,106,149,58,44,113,	0,1499,1744,2033,4659,7098,
#Partially deleted in new
chr19	11506001	11529172	chr19:11506001-11529172	1	-	11506183	11519170	789624	6	427,106,149,58,119,111,	0,1455,1700,1989,13073,23060,
#Partially deleted in new
chr19	11506074	11507709	chr19:11506074-11507709	0	-	11506074	11506074	8553170	2	354,253,	0,1382,
#Partially deleted in new
chr19	11506183	11528865	chr19:11506183-11528865	1	-	11507495	11519170	789624	8	245,106,28,58,224,418,119,121,	0,1273,1518,1807,6872,7620,12891,22561,
#Partially deleted in new
chr19	11506300	11529124	chr19:11506300-11529124	1	-	11507495	11513969	789624	6	128,106,347,224,418,63,	0,1156,1401,6755,7503,22761,
#Partially deleted in new
chr19	11507489	11529132	chr19:11507489-11529132	0	-	11507489	11513969	789624	6	73,149,58,224,418,71,	0,212,501,5566,6314,21572,
#Partially deleted in new
chr19	11507699	11513970	chr19:11507699-11513970	0	-	11513273	11513970	789624	3	349,229,167,	0,5356,6104,
#Partially deleted in new
chr19	11507771	11513858	chr19:11507771-11513858	0	-	11507771	11507771	8553170	3	79,58,55,	0,219,6032,
#Partially deleted in new
chr19	11513138	11528827	chr19:11513138-11528827	0	-	11513138	11513969	789624	3	141,418,83,	0,665,15606,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	11516046	11516330	chr19:11516046-11516330	3	-	11516046	11516046	8553170	1	284,	0,
#Partially deleted in new
chr19	11521967	11522498	chr19:11521967-11522498	7	+	11521967	11521967	16724991	1	531,	0,
#Partially deleted in new
chr19	11523435	11523831	chr19:11523435-11523831	7	+	11523435	11523435	16724991	1	396,	0,
#Partially deleted in new
chr19	11538716	11550323	chr19:11538716-11550323	3	+	11538927	11549795	0	7	274,122,67,138,111,147,774,	0,2359,7958,8115,9080,10606,10833,
#Partially deleted in new
chr19	11538766	11550322	chr19:11538766-11550322	1	+	11541162	11549795	789624	8	224,266,122,67,138,111,147,773,	0,528,2309,7908,8065,9030,10556,10783,
#Partially deleted in new
chr19	11538774	11550000	chr19:11538774-11550000	1	+	11541162	11549795	789624	8	216,275,122,67,138,111,147,451,	0,520,2301,7900,8057,9022,10548,10775,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	11538852	11542241	chr19:11538852-11542241	0	+	11538852	11538852	8553170	3	138,122,320,	0,2223,3069,
#Partially deleted in new
chr19	11539893	11547906	chr19:11539893-11547906	0	+	11541162	11547906	789624	5	128,122,67,138,110,	0,1182,6781,6938,7903,
#Partially deleted in new
chr19	11540235	11541173	chr19:11540235-11541173	0	+	11540425	11541173	789624	2	451,98,	0,840,
#Partially deleted in new
chr19	11541189	11549959	chr19:11541189-11549959	0	+	11541189	11549795	789624	4	8,67,69,368,	0,5485,5642,8402,
#Partially deleted in new
chr19	11546674	11549758	chr19:11546674-11549758	0	+	11546674	11549758	789624	4	67,138,111,209,	0,157,1122,2875,
#Partially deleted in new
chr19	11546707	11549724	chr19:11546707-11549724	0	+	11546707	11549559	789624	4	34,138,111,402,	0,124,1089,2615,
#Partially deleted in new
chr19	11547839	11550321	chr19:11547839-11550321	0	+	11547839	11550307	789624	4	68,147,196,289,	0,1483,1710,2193,
#Partially deleted in new
chr19	11551146	11559230	chr19:11551146-11559230	1	-	11552897	11554347	789624	4	1909,71,134,40,	0,2864,3085,8044,
#Partially deleted in new
chr19	11553042	11559236	chr19:11553042-11559236	3	-	11553745	11554347	789624	4	768,71,134,46,	0,968,1189,6148,
#Partially deleted in new
chr19	11553456	11559145	chr19:11553456-11559145	1	-	11553771	11554347	789624	4	359,71,134,179,	0,554,775,5510,
#Partially deleted in new
chr19	11553530	11555715	chr19:11553530-11555715	1	-	11553745	11555524	789624	4	280,71,134,194,	0,480,701,1991,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	11553563	11554794	chr19:11553563-11554794	1	-	11553745	11554347	789624	4	247,71,134,206,	0,447,668,1025,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	11553590	11559223	chr19:11553590-11559223	1	-	11553745	11554347	789624	5	220,71,134,127,33,	0,420,641,1229,5600,
#Partially deleted in new
chr19	11553627	11555655	chr19:11553627-11555655	1	-	11553834	11554347	789624	3	454,134,311,	0,604,1717,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	11555174	11559230	chr19:11555174-11559230	0	-	11555174	11555218	789624	2	545,40,	0,4016,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	11559373	11604278	chr19:11559373-11604278	0	+	11559373	11559373	8553170	5	243,124,48,104,69,	0,4687,5071,15876,44836,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	11559447	11614843	chr19:11559447-11614843	0	+	11614619	11614843	789624	5	169,124,104,127,17,	0,4613,15802,55079,55379,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	11559460	11575567	chr19:11559460-11575567	0	+	11559460	11559460	8553170	5	156,99,124,48,318,	0,2665,4600,4984,15789,
#Partially deleted in new
chr19	11574659	11578985	chr19:11574659-11578985	3	-	11575009	11577317	0	7	593,346,128,261,87,73,142,	0,1583,2056,2397,2933,3925,4184,
#Partially deleted in new
chr19	11574659	11577645	chr19:11574659-11577645	1	-	11575009	11577317	789624	5	593,346,128,261,53,	0,1583,2056,2397,2933,
#Partially deleted in new
chr19	11574690	11578986	chr19:11574690-11578986	1	-	11575009	11577317	0	6	562,346,128,261,87,143,	0,1552,2025,2366,2902,4153,
#Partially deleted in new
chr19	11574691	11578979	chr19:11574691-11578979	1	-	11575009	11577317	0	7	561,346,128,261,87,180,136,	0,1551,2024,2365,2901,3893,4152,
#Partially deleted in new
chr19	11574739	11577741	chr19:11574739-11577741	1	-	11575009	11577317	0	5	513,346,128,261,149,	0,1503,1976,2317,2853,
#Partially deleted in new
chr19	11574999	11577632	chr19:11574999-11577632	1	-	11575080	11577317	789624	3	207,54,40,	0,2264,2593,
#Partially deleted in new
chr19	11576378	11576943	chr19:11576378-11576943	0	-	11576378	11576378	8553170	2	210,228,	0,337,
#Partially deleted in new
chr19	11576599	11578976	chr19:11576599-11578976	0	-	11576599	11576599	8553170	4	718,87,73,133,	0,993,1985,2244,
#Partially deleted in new
chr19	11576731	11577527	chr19:11576731-11577527	0	-	11576731	11577317	789624	2	112,471,	0,325,
#Partially deleted in new
chr19	11576841	11577700	chr19:11576841-11577700	0	-	11576841	11576841	8553170	2	476,108,	0,751,
#Partially deleted in new
chr19	11577093	11578136	chr19:11577093-11578136	0	-	11577093	11577317	789624	3	224,87,61,	0,499,982,
#Partially deleted in new
chr19	11577104	11578923	chr19:11577104-11578923	0	-	11577104	11577317	8553170	4	213,87,178,80,	0,488,1375,1739,
#Partially deleted in new
chr19	11577159	11579008	chr19:11577159-11579008	0	-	11577159	11577317	789624	4	158,87,171,165,	0,433,864,1684,
#Partially deleted in new
chr19	11577300	11578954	chr19:11577300-11578954	0	-	11577300	11577317	8553170	4	17,602,73,111,	0,292,1284,1543,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	11585245	11587135	chr19:11585245-11587135	7	+	11585245	11585245	16724991	4	198,335,313,130,	0,359,1113,1760,
#Partially deleted in new
chr19	11597419	11619135	chr19:11597419-11619135	3	+	11597627	11617889	789624	4	211,127,61,2441,	0,17107,17407,19275,
#Partially deleted in new
chr19	11597461	11616773	chr19:11597461-11616773	0	+	11614619	11616773	789624	5	169,155,127,61,79,	0,6748,17065,17365,19233,
#Partially deleted in new
chr19	11597482	11619124	chr19:11597482-11619124	1	+	11597627	11616718	789624	4	148,127,61,2419,	0,17044,17344,19223,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	11639775	11686569	chr19:11639775-11686569	3	+	11639775	11639775	8553170	10	121,123,47,127,61,401,101,581,127,1694,	0,4463,6451,8582,10581,11877,38544,40616,42770,45100,
#Partially deleted in new
chr19	11648363	11652877	chr19:11648363-11652877	7	+	11648363	11648363	16724991	3	121,61,1225,	0,1993,3289,
#Deleted in new
chr19	11666068	11667030	chr19:11666068-11667030	7	-	11666068	11666068	16724991	1	962,	0,
#Partially deleted in new
chr19	11682545	11686190	chr19:11682545-11686190	5	+	11682545	11682545	16724991	3	127,52,1315,	0,1568,2330,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	11721264	11738973	chr19:11721264-11738973	3	-	11721700	11738819	789624	4	2078,61,127,157,	0,2929,3936,17552,
#Partially deleted in new
chr19	11721992	11738945	chr19:11721992-11738945	0	-	11721992	11724252	789624	3	1350,61,129,	0,2201,16824,
#Partially deleted in new
chr19	11722710	11738882	chr19:11722710-11738882	0	-	11722710	11722987	789624	2	632,66,	0,16106,
#Partially deleted in new
chr19	11723112	11739009	chr19:11723112-11739009	1	-	11723268	11738819	789624	3	230,127,193,	0,2088,15704,
#Partially deleted in new
chr19	11756532	11759933	chr19:11756532-11759933	7	-	11756532	11756532	16724991	4	1103,91,61,128,	0,1449,2255,3273,
#Partially deleted in new
chr19	11766999	11777973	chr19:11766999-11777973	0	+	11766999	11766999	8553170	2	197,363,	0,10611,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	11767091	11784078	chr19:11767091-11784078	3	+	11767193	11781906	789624	4	105,127,64,4060,	0,10519,11238,12927,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	11767091	11782486	chr19:11767091-11782486	0	+	11767193	11778120	789624	5	105,127,64,64,2468,	0,10519,11024,11238,12927,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	11796083	11798598	chr19:11796083-11798598	3	-	11796083	11796083	8553170	1	2515,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	11797666	11799279	chr19:11797666-11799279	0	+	11797666	11797666	8553170	3	133,121,182,	0,940,1431,
#Partially deleted in new
chr19	11798529	11808093	chr19:11798529-11808093	3	+	11805953	11807267	789624	3	198,126,2147,	0,6012,7417,
#Partially deleted in new
chr19	11798575	11806372	chr19:11798575-11806372	0	+	11805953	11806372	789624	2	152,426,	0,7371,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	11798587	11809622	chr19:11798587-11809622	0	+	11798587	11798587	8553170	3	140,126,246,	0,5954,10789,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	11814283	11835201	chr19:11814283-11835201	3	+	11814447	11832964	789624	4	167,127,61,3834,	0,15999,16333,17084,
#Partially deleted in new
chr19	11814286	11831701	chr19:11814286-11831701	0	+	11831542	11831701	789624	3	164,61,334,	0,16330,17081,
#Partially deleted in new
chr19	11814343	11831983	chr19:11814343-11831983	0	+	11814447	11831983	789624	4	107,136,61,616,	0,15930,16273,17024,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	11815808	11831420	chr19:11815808-11831420	0	+	11830375	11831420	789624	5	241,74,127,61,53,	0,11758,14474,14808,15559,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	11816016	11817675	chr19:11816016-11817675	0	+	11816016	11816016	8553170	1	1659,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	11829985	11831678	chr19:11829985-11831678	0	+	11830273	11831678	789624	3	424,61,311,	0,631,1382,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	11841240	11842439	chr19:11841240-11842439	3	-	11841240	11841240	8553170	2	195,247,	0,952,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	11848725	11851110	chr19:11848725-11851110	0	+	11848725	11848725	8553170	1	2385,	0,
#Partially deleted in new
chr19	11848760	11869482	chr19:11848760-11869482	1	+	11867477	11868569	789624	3	170,61,2177,	0,17776,18545,
#Partially deleted in new
chr19	11849062	11867462	chr19:11849062-11867462	0	+	11866195	11867462	789624	4	251,136,61,157,	0,17133,17474,18243,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	11856031	11858302	chr19:11856031-11858302	3	+	11856031	11856031	8553170	1	2271,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	11865956	11869491	chr19:11865956-11869491	3	+	11866156	11868569	789624	3	375,61,2186,	0,580,1349,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	11887783	11906267	chr19:11887783-11906267	3	+	11887923	11906098	789624	4	203,127,61,1619,	0,15789,16121,16865,
#Partially deleted in new
chr19	11887817	11904902	chr19:11887817-11904902	0	+	11887923	11904902	789624	4	169,85,61,254,	0,15797,16087,16831,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	11887854	11914329	chr19:11887854-11914329	1	+	11887923	11913410	789624	5	132,85,61,239,921,	0,15760,16050,16794,25554,
#Partially deleted in new
chr19	11925067	11950763	chr19:11925067-11950763	3	+	11925210	11950253	789624	4	206,127,61,2488,	0,22113,22446,23208,
#Partially deleted in new
chr19	11925067	11950773	chr19:11925067-11950773	1	+	11925210	11950253	789624	4	206,136,61,2498,	0,22104,22446,23208,
#Partially deleted in new
chr19	11925074	11979290	chr19:11925074-11979290	3	+	11925210	11979109	789624	4	199,127,61,1175,	0,51963,52296,53041,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	11925110	11978245	chr19:11925110-11978245	1	+	11925210	11978126	789624	4	163,138,136,130,	0,31394,51918,53005,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	11939958	11953381	chr19:11939958-11953381	3	+	11939958	11939958	8553170	2	68,400,	0,13023,
#Duplicated in new
chr19	11946753	11950773	chr19:11946753-11950773	1	+	11947171	11950253	789624	3	554,61,2498,	0,760,1522,
#Partially deleted in new
chr19	11965036	11978395	chr19:11965036-11978395	1	+	11965208	11978126	789624	3	175,127,280,	0,12001,13079,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	11965053	11980381	chr19:11965053-11980381	3	+	11965208	11979109	789624	4	158,136,61,2266,	0,11975,12317,13062,
#Partially deleted in new
chr19	11965053	11978530	chr19:11965053-11978530	0	+	11978290	11978530	789624	2	158,415,	0,13062,
#Partially deleted in new
chr19	11965081	11979315	chr19:11965081-11979315	1	+	11965208	11979109	789624	4	130,127,61,1200,	0,11956,12289,13034,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	11976821	11978275	chr19:11976821-11978275	0	+	11976941	11978275	789624	3	343,61,160,	0,549,1294,
#Partially deleted in new
chr19	11987655	12018470	chr19:11987655-12018470	1	+	11987655	11987655	8553170	3	168,49,299,	0,14118,30516,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	11987655	12035914	chr19:11987655-12035914	0	+	11987655	11987655	8553170	2	168,361,	0,47898,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	11987670	12003811	chr19:11987670-12003811	1	+	11987670	11987670	789624	3	153,49,420,	0,14103,15721,
#Partially deleted in new
chr19	11987678	12046275	chr19:11987678-12046275	1	+	11987678	11987678	789624	4	145,49,219,194,	0,14095,47875,58403,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	11987766	12003595	chr19:11987766-12003595	1	+	11987766	11987766	8553170	4	57,213,49,204,	0,2402,14007,15625,
#Deleted in new
chr19	11996808	11996916	chr19:11996808-11996916	7	+	11996808	11996808	16724991	1	108,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	12014731	12035688	chr19:12014731-12035688	1	-	12014844	12018199	789624	5	1935,61,127,47,152,	0,3144,3434,20096,20805,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12014757	12035710	chr19:12014757-12035710	3	-	12014844	12035539	789624	4	1909,61,136,174,	0,3118,3408,20779,
#Partially deleted in new
chr19	12016236	12035703	chr19:12016236-12035703	0	-	12016236	12035539	789624	4	430,61,127,167,	0,1639,1929,19300,
#Partially deleted in new
chr19	12016401	12035669	chr19:12016401-12035669	0	-	12016401	12018337	789624	5	265,61,215,47,133,	0,1474,1764,18426,19135,
#Partially deleted in new
chr19	12016403	12035678	chr19:12016403-12035678	0	-	12016403	12018199	789624	4	263,61,127,132,	0,1472,1762,19143,
#Partially deleted in new
chr19	12016411	12035696	chr19:12016411-12035696	0	-	12018275	12035539	789624	6	255,61,127,59,47,160,	0,1464,1754,13728,18416,19125,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	12016547	12018677	chr19:12016547-12018677	0	-	12016547	12018337	789624	3	119,61,512,	0,1328,1618,
#Partially deleted in new
chr19	12016604	12035676	chr19:12016604-12035676	0	-	12016604	12018199	789624	5	62,61,127,59,140,	0,1271,1561,13535,18932,
#Partially deleted in new
chr19	12016631	12035712	chr19:12016631-12035712	0	-	12016631	12018301	789624	5	35,61,136,59,176,	0,1244,1534,13508,18905,
#Partially deleted in new
chr19	12017887	12052967	chr19:12017887-12052967	3	-	12018261	12052801	789624	5	49,136,61,127,169,	0,278,28480,28746,34911,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	12018190	12035741	chr19:12018190-12035741	0	-	12018190	12022058	789624	3	102,260,205,	0,3739,17346,
#Deleted in new
chr19	12027912	12028021	chr19:12027912-12028021	7	-	12027912	12027912	16724991	1	109,	0,
#Partially deleted in new
chr19	12034575	12046275	chr19:12034575-12046275	1	+	12034575	12034575	8553170	3	17,219,194,	0,978,11506,
#Partially deleted in new
chr19	12035822	12046275	chr19:12035822-12046275	1	+	12035822	12035822	8553170	3	32,130,194,	0,1768,10259,
#Partially deleted in new
chr19	12043804	12052939	chr19:12043804-12052939	3	-	12043804	12052801	789624	4	1405,61,127,141,	0,2563,2829,8994,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12064698	12081565	chr19:12064698-12081565	3	+	12064873	12077121	789624	4	178,127,61,6254,	0,9332,9662,10613,
#Partially deleted in new
chr19	12064730	12075881	chr19:12064730-12075881	0	+	12075591	12075881	789624	2	146,570,	0,10581,
#Partially deleted in new
chr19	12064809	12077153	chr19:12064809-12077153	1	+	12064873	12075397	789624	3	67,127,1842,	0,9221,10502,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	12070163	12070271	chr19:12070163-12070271	7	+	12070163	12070163	16724991	1	108,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	12088244	12088346	chr19:12088244-12088346	3	-	12088244	12088244	8553170	1	102,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12092262	12098214	chr19:12092262-12098214	5	+	12092262	12092262	16724991	2	208,358,	0,5594,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	12092306	12098141	chr19:12092306-12098141	4	+	12092306	12092306	16724991	3	164,119,285,	0,1759,5550,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	12092306	12137235	chr19:12092306-12137235	7	+	12092306	12092306	16724991	3	164,153,229,	0,43468,44700,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12092335	12100788	chr19:12092335-12100788	4	+	12092335	12092335	16724991	4	135,60,119,2932,	0,1500,1730,5521,
#Partially deleted in new
chr19	12092386	12111660	chr19:12092386-12111660	4	+	12092386	12092386	16724991	4	84,60,127,415,	0,1449,17918,18859,
#Partially deleted in new
chr19	12092467	12113048	chr19:12092467-12113048	5	+	12092467	12092467	16724991	4	3,127,61,1803,	0,17837,18166,18778,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12092842	12140341	chr19:12092842-12140341	1	-	12092847	12140182	789624	4	210,61,127,162,	0,42657,42926,47337,
#Deleted in new
chr19	12096423	12096915	chr19:12096423-12096915	7	+	12096423	12096423	16724991	1	492,	0,
#Deleted in new
chr19	12106496	12106614	chr19:12106496-12106614	7	+	12106496	12106496	16724991	1	118,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12130484	12136874	chr19:12130484-12136874	0	-	12130484	12130484	8553170	4	215,61,136,24,	0,5015,5284,6366,
#Partially deleted in new
chr19	12131349	12140407	chr19:12131349-12140407	3	-	12132586	12140182	789624	4	2636,61,136,228,	0,4150,4419,8830,
#Partially deleted in new
chr19	12132116	12156731	chr19:12132116-12156731	3	-	12140213	12156558	789624	8	1869,61,136,146,75,61,127,176,	0,3383,3652,8063,10524,15278,15559,24439,
#Partially deleted in new
chr19	12133667	12140315	chr19:12133667-12140315	0	-	12133667	12140182	789624	4	318,61,127,136,	0,1832,2101,6512,
#Partially deleted in new
chr19	12133677	12140326	chr19:12133677-12140326	0	-	12135801	12140182	789624	5	308,61,127,26,147,	0,1822,2091,3173,6502,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	12133690	12137702	chr19:12133690-12137702	0	-	12133690	12133690	8553170	5	295,61,127,26,45,	0,1809,2078,3160,3967,
#Partially deleted in new
chr19	12135485	12140355	chr19:12135485-12140355	0	-	12135485	12135485	8553170	2	410,176,	0,4694,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12136905	12140355	chr19:12136905-12140355	0	-	12136905	12136905	8553170	2	369,176,	0,3274,
#Partially deleted in new
chr19	12140216	12156731	chr19:12140216-12156731	0	-	12147395	12156558	789624	6	109,96,967,61,123,176,	0,2424,5041,7178,7463,16339,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	12141805	12143322	chr19:12141805-12143322	5	-	12141805	12141805	16724991	1	1517,	0,
#Partially deleted in new
chr19	12142089	12147802	chr19:12142089-12147802	0	-	12142469	12147802	789624	4	432,75,61,127,	0,551,5305,5586,
#Partially deleted in new
chr19	12142370	12142893	chr19:12142370-12142893	7	-	12142370	12142370	16724991	1	523,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12144889	12156714	chr19:12144889-12156714	1	-	12147395	12156558	789624	4	1335,61,123,159,	0,2505,2790,11666,
#Partially deleted in new
chr19	12145264	12156729	chr19:12145264-12156729	3	-	12145296	12156558	789624	4	960,61,127,174,	0,2130,2411,11291,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12163063	12189881	chr19:12163063-12189881	3	+	12163203	12188001	789624	4	143,127,61,3312,	0,22721,23050,23506,
#Partially deleted in new
chr19	12163063	12186602	chr19:12163063-12186602	0	+	12185877	12186602	789624	5	143,110,127,61,33,	0,6218,22721,23050,23506,
#Partially deleted in new
chr19	12163063	12186843	chr19:12163063-12186843	0	+	12186576	12186843	789624	3	143,61,274,	0,23050,23506,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	12163115	12186157	chr19:12163115-12186157	0	+	12185877	12186157	789624	5	91,57,246,127,44,	0,644,1513,22669,22998,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	12184617	12188793	chr19:12184617-12188793	0	+	12184617	12184617	8553170	3	1294,61,2224,	0,1496,1952,
#Deleted in new
chr19	12185828	12186678	chr19:12185828-12186678	0	+	12185828	12185828	8553170	2	346,109,	0,741,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	12195014	12209806	chr19:12195014-12209806	5	+	12195014	12195014	16724991	3	129,377,1536,	0,12317,13256,
#Partially deleted in new
chr19	12195014	12237432	chr19:12195014-12237432	5	+	12195014	12195014	16724991	2	129,343,	0,42075,
#Partially deleted in new
chr19	12195016	12237767	chr19:12195016-12237767	7	+	12195016	12195016	16724991	3	127,112,678,	0,39696,42073,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	12195087	12207454	chr19:12195087-12207454	4	+	12195087	12195087	16724991	3	56,232,123,	0,7232,12244,
#Deleted in new
chr19	12207331	12209563	chr19:12207331-12209563	5	+	12207331	12207331	16724991	2	127,1369,	0,863,
#Partially deleted in new
chr19	12247642	12294794	chr19:12247642-12294794	0	-	12250366	12294694	789624	8	1036,61,127,1577,61,127,144,103,	0,2335,2599,24844,27330,28313,45589,47049,
#Partially deleted in new
chr19	12248402	12294834	chr19:12248402-12294834	0	-	12250366	12294694	789624	7	276,61,127,1577,61,127,143,	0,1575,1839,24084,26570,27553,46289,
#Partially deleted in new
chr19	12260125	12260537	chr19:12260125-12260537	7	+	12260125	12260125	16724991	1	412,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	12271811	12294813	chr19:12271811-12294813	1	-	12272406	12294694	789624	5	2252,61,127,144,122,	0,3161,4144,21420,22880,
#Partially deleted in new
chr19	12272328	12294887	chr19:12272328-12294887	3	-	12272406	12294694	789624	4	1735,61,127,196,	0,2644,3627,22363,
#Partially deleted in new
chr19	12274978	12294851	chr19:12274978-12294851	0	-	12276065	12294694	789624	5	55,127,31,144,160,	0,977,16241,18253,19713,
#Deleted in new
chr19	12284336	12285185	chr19:12284336-12285185	7	+	12284336	12284336	16724991	1	849,	0,
#Partially deleted in new
chr19	12291027	12294880	chr19:12291027-12294880	0	-	12291027	12291027	8553170	3	223,144,189,	0,2204,3664,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12317476	12333688	chr19:12317476-12333688	3	-	12318593	12333482	789624	4	2357,61,127,209,	0,3795,5108,16003,
#Partially deleted in new
chr19	12319178	12333492	chr19:12319178-12333492	0	-	12319178	12322618	789624	5	487,61,127,61,13,	0,2093,3406,5740,14301,
#Partially deleted in new
chr19	12319186	12333720	chr19:12319186-12333720	1	-	12319216	12333482	789624	5	125,404,61,127,241,	0,243,2085,3398,14293,
#Partially deleted in new
chr19	12319541	12333502	chr19:12319541-12333502	0	-	12319541	12322618	789624	5	292,61,127,61,23,	0,1730,3043,5377,13938,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	12345948	12365633	chr19:12345948-12365633	3	-	12349700	12363631	789624	6	5370,61,127,118,442,101,	0,6061,7039,17605,18853,19584,
#Partially deleted in new
chr19	12349582	12365641	chr19:12349582-12365641	1	-	12349700	12352068	789624	3	1736,61,109,	0,2427,15950,
#Partially deleted in new
chr19	12349700	12363631	chr19:12349700-12363631	1	-	12349700	12363631	789624	4	1618,61,127,78,	0,2309,3287,13853,
#Partially deleted in new
chr19	12350915	12365905	chr19:12350915-12365905	0	-	12350915	12352068	789624	3	403,61,103,	0,1094,14887,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	12351790	12365661	chr19:12351790-12365661	0	-	12351790	12351790	8553170	3	280,127,129,	0,1197,13742,
#Deleted in new
chr19	12373608	12373731	chr19:12373608-12373731	7	+	12373608	12373608	16724991	1	123,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12379188	12401274	chr19:12379188-12401274	3	-	12382620	12401070	789624	4	2198,61,127,207,	0,3382,4372,21879,
#Partially deleted in new
chr19	12379745	12383687	chr19:12379745-12383687	7	-	12379745	12379745	16724991	3	1641,61,127,	0,2825,3815,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12390015	12400980	chr19:12390015-12400980	1	-	12390465	12393330	789624	4	2191,61,127,657,	0,2587,3281,10308,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12390015	12401271	chr19:12390015-12401271	3	-	12390465	12401070	789624	4	2191,61,127,204,	0,2587,3281,11052,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	12390015	12395120	chr19:12390015-12395120	0	-	12390015	12390015	8553170	3	2191,61,1824,	0,2587,3281,
#Partially deleted in new
chr19	12391948	12441082	chr19:12391948-12441082	3	-	12391948	12440914	789624	4	258,61,127,171,	0,654,1348,48963,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12429706	12441112	chr19:12429706-12441112	3	-	12430155	12440914	789624	4	2274,61,127,201,	0,2670,3364,11205,
#Partially deleted in new
chr19	12431568	12441021	chr19:12431568-12441021	0	-	12432372	12440914	789624	4	412,151,127,110,	0,718,1502,9343,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	12433102	12484816	chr19:12433102-12484816	3	-	12457521	12484657	789624	5	95,146,58,127,162,	0,24328,33359,33621,51552,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	12450934	12460705	chr19:12450934-12460705	3	+	12450934	12450934	8553170	3	368,180,147,	0,3868,9624,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12461183	12484829	chr19:12461183-12484829	3	-	12463995	12484657	789624	4	4550,58,127,175,	0,5278,5540,23471,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12461558	12551474	chr19:12461558-12551474	3	-	12463995	12551332	8553170	4	4175,58,127,145,	0,4903,5165,89771,
#Partially deleted in new
chr19	12465608	12513833	chr19:12465608-12513833	0	-	12465608	12513833	789624	4	125,58,127,90,	0,853,1115,48135,
#Partially deleted in new
chr19	12494817	12513854	chr19:12494817-12513854	0	-	12494817	12494817	8553170	2	687,111,	0,18926,
#Partially deleted in new
chr19	12502674	12504106	chr19:12502674-12504106	7	+	12502674	12502674	16724991	3	142,616,83,	0,465,1349,
#Deleted in new
chr19	12504664	12504890	chr19:12504664-12504890	7	+	12504664	12504664	16724991	1	226,	0,
#Partially deleted in new
chr19	12504904	12505976	chr19:12504904-12505976	7	+	12504904	12504904	16724991	2	115,313,	0,759,
#Partially deleted in new
chr19	12506248	12508030	chr19:12506248-12508030	7	+	12506248	12506248	16724991	4	13,82,46,480,	0,339,756,1302,
#Partially deleted in new
chr19	12508128	12508263	chr19:12508128-12508263	7	+	12508128	12508128	16724991	1	135,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12525369	12551529	chr19:12525369-12551529	3	-	12526445	12551332	789624	4	2547,61,127,200,	0,2934,3200,25960,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12525719	12580975	chr19:12525719-12580975	3	-	12580484	12580975	789624	4	2197,61,127,3472,	0,2584,2850,51784,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12529767	12532973	chr19:12529767-12532973	3	-	12529767	12529767	8553170	2	469,64,	0,3142,
#Partially deleted in new
chr19	12548712	12551434	chr19:12548712-12551434	1	-	12548799	12551332	789624	2	150,105,	0,2617,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12550241	12551432	chr19:12550241-12551432	0	-	12550241	12550241	8553170	2	411,103,	0,1088,
#Partially deleted in new
chr19	12552596	12553644	chr19:12552596-12553644	3	+	12552596	12552596	8553170	2	273,270,	0,778,
#Partially deleted in new
chr19	12559570	12561105	chr19:12559570-12561105	7	+	12559570	12559570	16724991	2	1021,193,	0,1342,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	12577960	12610803	chr19:12577960-12610803	3	-	12580484	12610680	789624	5	3764,61,127,45,240,	0,4889,5469,31197,32603,
#Partially deleted in new
chr19	12581306	12610803	chr19:12581306-12610803	0	-	12609908	12610680	789624	6	418,61,127,45,105,240,	0,1543,2123,27851,28563,29257,
#Partially deleted in new
chr19	12581522	12597311	chr19:12581522-12597311	0	-	12581522	12597151	789624	4	202,61,127,163,	0,1327,1907,15626,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	12583484	12640098	chr19:12583484-12640098	0	-	12583484	12583484	8553170	6	72,45,139,78,165,34,	0,25673,39776,50926,53791,56580,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12610917	12631921	chr19:12610917-12631921	3	+	12611079	12629260	789624	4	165,127,61,4201,	0,12782,13732,16803,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	12610917	12633840	chr19:12610917-12633840	1	+	12611079	12627800	789624	3	165,127,6120,	0,12782,16803,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	12610919	12627805	chr19:12610919-12627805	0	+	12611079	12612357	789624	5	163,140,127,61,85,	0,1306,12780,13730,16801,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	12610919	12627982	chr19:12610919-12627982	0	+	12612225	12623716	789624	5	163,91,127,61,262,	0,1306,12780,13730,16801,
#Partially deleted in new
chr19	12610953	12628106	chr19:12610953-12628106	0	+	12627856	12628106	789624	3	129,61,386,	0,13696,16767,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12610957	12612394	chr19:12610957-12612394	0	+	12610957	12610957	8553170	2	125,169,	0,1268,
#Deleted in new
chr19	12643274	12643919	chr19:12643274-12643919	7	-	12643274	12643274	16724991	1	645,	0,
#Partially deleted in new
chr19	12643830	12648397	chr19:12643830-12648397	3	-	12646619	12648397	789624	5	116,240,103,156,223,	0,2662,3402,3612,4344,
#Deleted in new
chr19	12646510	12647584	chr19:12646510-12647584	0	-	12646510	12646510	8553170	2	222,352,	0,722,
#Partially deleted in new
chr19	12646512	12666742	chr19:12646512-12666742	3	-	12646619	12666701	789624	24	220,103,156,228,81,88,102,119,118,98,186,117,108,110,79,121,83,117,146,133,194,174,103,200,	0,720,930,1662,2623,2828,3400,3591,5640,5850,9181,10058,10436,10933,11550,11711,11915,14747,16804,17190,18279,18839,19190,20030,
#Deleted in new
chr19	12646512	12647146	chr19:12646512-12647146	0	-	12646512	12646512	8553170	2	220,103,	0,531,
#Deleted in new
chr19	12646512	12647673	chr19:12646512-12647673	0	-	12646512	12646512	8553170	3	220,103,231,	0,720,930,
#Partially deleted in new
chr19	12646515	12666734	chr19:12646515-12666734	1	-	12646619	12666701	789624	24	217,103,156,228,81,88,102,119,118,98,186,117,108,110,79,121,80,117,146,133,194,174,103,192,	0,717,927,1659,2620,2825,3397,3588,5637,5847,9178,10055,10433,10930,11547,11708,11912,14744,16801,17187,18276,18836,19187,20027,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr19	12646560	12666683	chr19:12646560-12666683	0	-	12646560	12646560	8553170	22	172,103,156,228,81,88,102,119,118,98,994,108,110,79,121,117,146,133,194,174,103,141,	0,672,882,1614,2575,2780,3352,3543,5592,5802,9133,10388,10885,11502,11663,14699,16756,17142,18231,18791,19142,19982,
#Partially deleted in new
chr19	12652191	12656578	chr19:12652191-12656578	0	-	12652420	12656578	789624	4	79,67,186,8,	0,171,3502,4379,
#Partially deleted in new
chr19	12652198	12657379	chr19:12652198-12657379	0	-	12652198	12652198	8553170	6	72,98,186,117,108,16,	0,164,3495,4372,4750,5165,
#Partially deleted in new
chr19	12652244	12657235	chr19:12652244-12657235	0	-	12652244	12652244	8553170	6	26,98,186,117,108,25,	0,118,3449,4326,4704,4966,
#Partially deleted in new
chr19	12652254	12657474	chr19:12652254-12657474	0	-	12655694	12657474	789624	6	16,98,169,117,108,29,	0,108,3439,4316,4694,5191,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12656658	12659010	chr19:12656658-12659010	0	-	12656658	12656658	8553170	4	29,108,315,280,	0,290,787,2072,
#Partially deleted in new
chr19	12657454	12658617	chr19:12657454-12658617	0	-	12657454	12657454	8553170	3	101,79,394,	0,608,769,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12660896	12663418	chr19:12660896-12663418	0	-	12660896	12660896	8553170	2	480,102,	0,2420,
#Partially deleted in new
chr19	12663434	12666742	chr19:12663434-12666742	0	-	12663434	12666701	789624	4	28,133,174,200,	0,268,1917,3108,
#Deleted in new
chr19	12664803	12666742	chr19:12664803-12666742	0	-	12664803	12664803	8553170	3	182,174,200,	0,548,1739,
#Partially deleted in new
chr19	12664827	12669397	chr19:12664827-12669397	3	-	12664827	12669397	789624	5	158,174,103,106,44,	0,524,875,4300,4526,
#Deleted in new
chr19	12664932	12666736	chr19:12664932-12666736	0	-	12664932	12666701	789624	4	53,174,130,194,	0,419,770,1610,
#Deleted in new
chr19	12665245	12666742	chr19:12665245-12666742	0	-	12665245	12665245	8553170	3	280,103,200,	0,457,1297,
#Partially deleted in new
chr19	12666799	12675832	chr19:12666799-12675832	3	+	12669790	12675672	789624	11	193,120,139,121,106,49,127,68,109,115,310,	0,1708,2955,3177,3380,3763,3895,6047,6208,6402,8723,
#Partially deleted in new
chr19	12666801	12675791	chr19:12666801-12675791	0	+	12666801	12666801	8553170	10	191,120,326,106,49,127,68,109,115,269,	0,1706,2953,3378,3761,3893,6045,6206,6400,8721,
#Partially deleted in new
chr19	12666813	12675831	chr19:12666813-12675831	0	+	12669790	12670188	789624	11	179,120,139,104,106,49,127,68,109,115,309,	0,1694,2941,3163,3366,3749,3881,6033,6194,6388,8709,
#Partially deleted in new
chr19	12666829	12673211	chr19:12666829-12673211	0	+	12669790	12670188	789624	10	163,120,139,104,106,93,127,68,109,10,	0,1678,2925,3147,3350,3689,3865,6017,6178,6372,
#Deleted in new
chr19	12668070	12669489	chr19:12668070-12669489	3	-	12668358	12669403	789624	4	355,98,106,136,	0,449,1057,1283,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	12668070	12681834	chr19:12668070-12681834	3	-	12679839	12681766	8553170	14	355,98,106,3248,61,116,126,104,106,87,97,122,124,275,	0,449,1057,1283,4953,7747,7946,9037,9220,11386,11552,11730,12131,13489,
#Deleted in new
chr19	12668074	12669403	chr19:12668074-12669403	1	-	12668358	12669403	789624	4	351,92,106,50,	0,445,1053,1279,
#Deleted in new
chr19	12668144	12669401	chr19:12668144-12669401	0	-	12668515	12669401	789624	3	473,106,48,	0,983,1209,
#Partially deleted in new
chr19	12669552	12673305	chr19:12669552-12673305	0	+	12669552	12669552	8553170	5	528,106,68,109,104,	0,627,3294,3455,3649,
#Partially deleted in new
chr19	12669754	12673268	chr19:12669754-12673268	0	+	12669790	12670793	789624	8	139,121,106,49,111,68,109,67,	0,222,425,808,956,3092,3253,3447,
#Deleted in new
chr19	12669757	12670766	chr19:12669757-12670766	0	+	12669757	12669757	8553170	4	340,106,93,56,	0,422,761,953,
#Partially deleted in new
chr19	12669768	12672878	chr19:12669768-12672878	0	+	12669768	12669768	8553170	5	329,106,49,127,32,	0,411,794,926,3078,
#Partially deleted in new
chr19	12670008	12675810	chr19:12670008-12675810	0	+	12670008	12672876	789624	6	89,106,68,109,115,288,	0,171,2838,2999,3193,5514,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12670078	12671023	chr19:12670078-12671023	3	-	12670078	12670078	8553170	2	219,348,	0,597,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12672272	12675564	chr19:12672272-12675564	0	+	12672272	12672272	8553170	4	642,109,115,42,	0,735,929,3250,
#Partially deleted in new
chr19	12675716	12679520	chr19:12675716-12679520	0	-	12675791	12679520	789624	5	217,62,104,106,64,	0,300,1391,1574,3740,
#Partially deleted in new
chr19	12675720	12681902	chr19:12675720-12681902	3	-	12675837	12681766	0	9	213,126,104,106,87,97,122,165,343,	0,296,1387,1570,3736,3902,4080,4440,5839,
#Deleted in new
chr19	12675720	12676072	chr19:12675720-12676072	0	-	12675922	12676072	789624	2	229,56,	0,296,
#Partially deleted in new
chr19	12675721	12681771	chr19:12675721-12681771	1	-	12675837	12681766	0	8	212,89,106,87,97,122,165,212,	0,295,1569,3735,3901,4079,4439,5838,
#Partially deleted in new
chr19	12675721	12679540	chr19:12675721-12679540	0	-	12675837	12679540	789624	4	212,62,106,84,	0,295,1569,3735,
#Partially deleted in new
chr19	12675733	12681807	chr19:12675733-12681807	0	-	12679692	12681766	789624	8	200,126,104,106,87,97,165,248,	0,283,1374,1557,3723,3889,4427,5826,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	12675742	12681206	chr19:12675742-12681206	1	-	12675837	12681113	0	9	191,126,104,106,87,97,122,165,174,	0,274,1365,1548,3714,3880,4058,4418,5290,
#Deleted in new
chr19	12675750	12676918	chr19:12675750-12676918	0	-	12675750	12675750	8553170	2	183,902,	0,266,
#Partially deleted in new
chr19	12675761	12681860	chr19:12675761-12681860	0	-	12676092	12681766	789624	8	172,126,106,87,97,122,165,301,	0,255,1529,3695,3861,4039,4399,5798,
#Partially deleted in new
chr19	12675831	12681771	chr19:12675831-12681771	1	-	12675837	12681766	789624	11	102,123,113,106,87,97,122,165,165,9,35,	0,185,1267,1459,3625,3791,3969,4329,5728,5895,5905,
#Partially deleted in new
chr19	12676774	12680220	chr19:12676774-12680220	0	-	12676774	12676774	8553170	6	437,106,87,97,122,60,	0,516,2682,2848,3026,3386,
#Partially deleted in new
chr19	12677089	12679914	chr19:12677089-12679914	0	-	12677089	12677089	8553170	4	287,87,97,114,	0,2367,2533,2711,
#Partially deleted in new
chr19	12677164	12680030	chr19:12677164-12680030	0	-	12677164	12677164	8553170	4	47,106,263,230,	0,126,2292,2636,
#Partially deleted in new
chr19	12677167	12681868	chr19:12677167-12681868	0	-	12679839	12681766	789624	7	44,106,87,97,122,130,309,	0,123,2289,2455,2633,3028,4392,
#Partially deleted in new
chr19	12677270	12680281	chr19:12677270-12680281	0	-	12679839	12680281	789624	5	106,87,97,122,86,	0,2186,2352,2530,2925,
#Partially deleted in new
chr19	12677290	12681332	chr19:12677290-12681332	0	-	12677290	12680163	789624	6	106,87,97,122,165,28,	0,2166,2332,2510,2870,4014,
#Partially deleted in new
chr19	12677302	12681563	chr19:12677302-12681563	0	-	12679994	12681563	789624	6	94,87,97,230,165,4,	0,2154,2320,2498,2858,4257,
#Partially deleted in new
chr19	12677327	12681413	chr19:12677327-12681413	0	-	12677327	12681364	789624	6	69,87,97,122,165,55,	0,2129,2295,2473,2833,4031,
#Deleted in new
chr19	12679461	12680177	chr19:12679461-12680177	0	-	12679461	12679461	8553170	3	82,97,377,	0,161,339,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12679624	12681161	chr19:12679624-12681161	0	-	12679624	12679624	8553170	4	95,122,130,129,	0,176,571,1408,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12679656	12681211	chr19:12679656-12681211	0	-	12679906	12681113	789624	4	63,122,176,179,	0,144,493,1376,
#Partially deleted in new
chr19	12679693	12681838	chr19:12679693-12681838	0	-	12679906	12681766	789624	4	26,122,176,279,	0,107,456,1866,
#Partially deleted in new
chr19	12679943	12681853	chr19:12679943-12681853	0	-	12679943	12679943	8553170	2	382,294,	0,1616,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12682692	12687279	chr19:12682692-12687279	3	-	12682692	12682692	8553170	2	536,99,	0,4488,
#Partially deleted in new
chr19	12687997	12688422	chr19:12687997-12688422	1	+	12688048	12688372	789624	1	425,	0,
#Partially deleted in new
chr19	12688048	12688372	chr19:12688048-12688372	3	+	12688048	12688372	789624	2	93,117,	0,207,
#Partially deleted in new
chr19	12688052	12696619	chr19:12688052-12696619	0	-	12694612	12696581	789624	9	286,208,66,90,114,149,92,129,447,	0,1030,1319,1488,1708,1909,3113,6541,8120,
#Partially deleted in new
chr19	12688916	12696643	chr19:12688916-12696643	3	-	12689215	12696581	789624	10	374,66,90,114,149,92,113,129,140,471,	0,455,624,844,1045,2249,2425,5677,5882,7256,
#Partially deleted in new
chr19	12688921	12689238	chr19:12688921-12689238	3	+	12688921	12688921	8553170	2	147,125,	0,192,
#Partially deleted in new
chr19	12689215	12696581	chr19:12689215-12696581	1	-	12689215	12696581	789624	10	75,66,90,114,239,92,113,129,138,381,	0,156,325,545,746,1950,2126,5378,5583,6985,
#Partially deleted in new
chr19	12699193	12723996	chr19:12699193-12723996	3	-	12701345	12720977	789624	26	2050,128,75,100,106,96,99,88,159,108,87,172,226,153,166,61,119,123,82,134,107,150,76,112,117,228,	0,2132,2404,2558,2878,3629,4234,4520,6046,6298,6488,7002,7376,11427,12102,12359,15627,15853,16049,16211,16439,19835,20067,21685,24055,24575,
#Partially deleted in new
chr19	12699200	12722355	chr19:12699200-12722355	1	-	12701345	12720977	789624	25	2043,128,75,100,76,96,99,88,159,108,87,172,226,153,166,61,119,123,82,134,107,150,76,112,222,	0,2125,2397,2551,2871,3622,4227,4513,6039,6291,6481,6995,7369,11420,12095,12352,15620,15846,16042,16204,16432,19828,20060,21678,22933,
#Partially deleted in new
chr19	12699672	12721715	chr19:12699672-12721715	1	-	12701345	12720977	789624	24	1571,128,75,100,76,96,99,88,159,108,87,172,226,153,166,61,119,123,82,134,107,150,76,837,	0,1653,1925,2079,2399,3150,3755,4041,5567,5819,6009,6523,6897,10948,11623,11880,15148,15374,15570,15732,15960,19356,19588,21206,
#Partially deleted in new
chr19	12701053	12702845	chr19:12701053-12702845	0	-	12701345	12702845	789624	6	190,128,47,100,76,23,	0,272,544,698,1018,1769,
#Partially deleted in new
chr19	12701152	12722572	chr19:12701152-12722572	1	-	12701345	12720977	789624	25	91,128,75,100,106,96,99,88,159,108,87,172,226,153,166,61,119,123,82,134,107,150,76,112,96,	0,173,445,599,919,1670,2275,2561,4087,4339,4529,5043,5417,9468,10143,10400,13668,13894,14090,14252,14480,17876,18108,19726,21324,
#Partially deleted in new
chr19	12701326	12724011	chr19:12701326-12724011	1	-	12701345	12720977	789624	25	127,75,100,76,96,99,88,159,108,87,172,226,153,166,61,119,123,82,134,107,150,76,112,117,243,	0,271,425,745,1496,2101,2387,3913,4165,4355,4869,5243,9294,9969,10226,13494,13720,13916,14078,14306,17702,17934,19552,21922,22442,
#Partially deleted in new
chr19	12701598	12703050	chr19:12701598-12703050	0	-	12701598	12701598	8553170	3	253,76,228,	0,473,1224,
#Partially deleted in new
chr19	12702827	12722525	chr19:12702827-12722525	0	-	12702827	12720977	789624	20	91,99,88,159,108,87,172,226,153,166,61,119,123,82,134,107,150,76,112,49,	0,600,886,2412,2664,2854,3368,3742,7793,8468,8725,11993,12219,12415,12577,12805,16201,16433,18051,19649,
#Partially deleted in new
chr19	12703675	12705490	chr19:12703675-12705490	0	-	12703675	12703675	8553170	2	126,251,	0,1564,
#Partially deleted in new
chr19	12703756	12706282	chr19:12703756-12706282	0	-	12706040	12706282	789624	6	45,159,108,87,100,87,	0,1483,1735,1925,2253,2439,
#Partially deleted in new
chr19	12703757	12706674	chr19:12703757-12706674	0	-	12705749	12706674	789624	6	44,159,108,149,172,105,	0,1482,1734,1924,2438,2812,
#Partially deleted in new
chr19	12706448	12706518	chr19:12706448-12706518	3	-	12706448	12706448	789624	1	70,	0,
#Partially deleted in new
chr19	12710742	12722540	chr19:12710742-12722540	0	-	12710742	12710742	8553170	7	31,131,30,150,76,112,64,	0,553,4967,8286,8518,10136,11734,
#Partially deleted in new
chr19	12711242	12715266	chr19:12711242-12715266	0	-	12711242	12711242	8553170	5	219,61,119,123,24,	0,310,3578,3804,4000,
#Partially deleted in new
chr19	12714903	12722287	chr19:12714903-12722287	0	-	12715705	12720977	789624	9	36,123,82,134,78,150,76,112,154,	0,143,339,501,729,4125,4357,5975,7230,
#Partially deleted in new
chr19	12715197	12719287	chr19:12715197-12719287	0	-	12715197	12715197	8553170	5	127,134,107,150,27,	0,207,435,3831,4063,
#Partially deleted in new
chr19	12715440	12722537	chr19:12715440-12722537	0	-	12715705	12720977	789624	6	98,78,150,76,112,61,	0,192,3588,3820,5438,7036,
#Partially deleted in new
chr19	12719097	12723932	chr19:12719097-12723932	0	-	12719097	12720977	789624	5	81,76,112,112,160,	0,163,1781,4151,4675,
#Partially deleted in new
chr19	12719266	12723613	chr19:12719266-12723613	0	-	12719266	12720977	789624	3	70,112,365,	0,1612,3982,
#Partially deleted in new
chr19	12730639	12734775	chr19:12730639-12734775	3	-	12730960	12734657	789624	3	429,78,463,	0,704,3673,
#Partially deleted in new
chr19	12730639	12734657	chr19:12730639-12734657	0	-	12731500	12734657	789624	3	429,214,345,	0,704,3673,
#Partially deleted in new
chr19	12730639	12734666	chr19:12730639-12734666	1	-	12730960	12734657	789624	2	429,354,	0,3673,
#Partially deleted in new
chr19	12730641	12734671	chr19:12730641-12734671	1	-	12731344	12734657	789624	3	427,78,336,	0,702,3694,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12730648	12731853	chr19:12730648-12731853	0	-	12730648	12730648	8553170	2	420,510,	0,695,
#Partially deleted in new
chr19	12737138	12748323	chr19:12737138-12748323	3	+	12737505	12748104	789624	8	55,208,148,149,151,108,198,351,	0,320,1372,8238,8470,10058,10256,10834,
#Partially deleted in new
chr19	12737257	12745750	chr19:12737257-12745750	0	+	12737505	12745750	789624	4	409,148,149,142,	0,1253,8119,8351,
#Partially deleted in new
chr19	12737491	12748323	chr19:12737491-12748323	1	+	12737505	12748104	789624	7	175,148,149,151,108,198,351,	0,1019,7885,8117,9705,9903,10481,
#Partially deleted in new
chr19	12737496	12745650	chr19:12737496-12745650	0	+	12737496	12737496	8553170	3	170,148,274,	0,1014,7880,
#Partially deleted in new
chr19	12737554	12748322	chr19:12737554-12748322	1	+	12737554	12748104	789624	8	6,104,148,149,151,108,198,350,	0,8,956,7822,8054,9642,9840,10418,
#Partially deleted in new
chr19	12751701	12758406	chr19:12751701-12758406	3	+	12752592	12758077	789624	10	273,203,95,234,155,78,153,81,155,756,	0,840,1558,2850,3175,3677,3913,4153,4439,5949,
#Partially deleted in new
chr19	12751801	12758458	chr19:12751801-12758458	1	+	12752592	12758077	789624	10	38,203,95,234,155,78,153,81,155,808,	0,740,1458,2750,3075,3577,3813,4053,4339,5849,
#Partially deleted in new
chr19	12752592	12758455	chr19:12752592-12758455	1	+	12752592	12758077	789624	9	152,95,234,155,78,153,81,155,805,	0,667,1959,2284,2786,3022,3262,3548,5058,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12755858	12756706	chr19:12755858-12756706	0	+	12755858	12756299	789624	2	77,566,	0,282,
#Partially deleted in new
chr19	12763002	12775523	chr19:12763002-12775523	1	-	12763281	12775449	789624	23	429,72,111,104,83,35,6,88,138,70,88,111,202,141,161,81,63,68,133,51,73,86,119,	0,525,665,1811,1996,2687,2826,2924,3100,4392,4813,5010,6878,7929,8156,8394,9187,9610,9777,9991,11666,11809,12402,
#Partially deleted in new
chr19	12763003	12775620	chr19:12763003-12775620	1	-	12763281	12775449	789624	22	428,72,111,104,83,35,88,138,70,88,111,202,141,161,81,63,68,133,51,73,86,216,	0,524,664,1810,1995,2686,2923,3099,4391,4812,5009,6877,7928,8155,8393,9186,9609,9776,9990,11665,11808,12401,
#Deleted in new
chr19	12763362	12763722	chr19:12763362-12763722	0	-	12763362	12763362	8553170	2	69,195,	0,165,
#Partially deleted in new
chr19	12763700	12765364	chr19:12763700-12765364	0	-	12763700	12763700	8553170	3	78,104,366,	0,1113,1298,
#Partially deleted in new
chr19	12763758	12772818	chr19:12763758-12772818	0	-	12765711	12772818	789624	8	20,104,83,35,32,63,68,39,	0,1055,1240,1931,2168,8431,8854,9021,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12764347	12766523	chr19:12764347-12766523	0	-	12764347	12764347	8553170	2	570,1525,	0,651,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12765166	12775533	chr19:12765166-12775533	0	-	12765166	12765166	8553170	4	321,337,86,129,	0,9238,9645,10238,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12765656	12766614	chr19:12765656-12766614	0	-	12765656	12765656	8553170	2	358,512,	0,446,
#Partially deleted in new
chr19	12765792	12768084	chr19:12765792-12768084	0	-	12765792	12765792	8553170	5	222,138,70,88,72,	0,310,1602,2023,2220,
#Partially deleted in new
chr19	12769955	12778412	chr19:12769955-12778412	0	-	12769955	12773029	789624	11	127,141,161,81,63,68,133,51,73,86,113,	0,976,1203,1441,2234,2657,2824,3038,4713,4856,8344,
#Partially deleted in new
chr19	12770936	12778457	chr19:12770936-12778457	0	-	12770936	12773029	789624	10	136,161,81,63,68,133,51,73,86,113,	0,222,460,1253,1676,1843,2057,3732,3875,7408,
#Partially deleted in new
chr19	12771228	12775539	chr19:12771228-12775539	0	-	12771228	12771228	8553170	8	91,81,63,68,133,51,229,135,	0,168,961,1384,1551,1765,3440,4176,
#Partially deleted in new
chr19	12771228	12778420	chr19:12771228-12778420	0	-	12771228	12773029	789624	9	91,81,63,68,133,51,107,86,121,	0,168,961,1384,1551,1765,3406,3583,7071,
#Partially deleted in new
chr19	12771276	12778419	chr19:12771276-12778419	0	-	12772229	12773029	789624	9	43,81,63,90,133,51,107,86,75,	0,120,913,1336,1503,1717,3358,3535,7068,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	12771394	12773253	chr19:12771394-12773253	0	-	12771394	12773029	789624	5	83,63,68,133,260,	0,795,1218,1385,1599,
#Partially deleted in new
chr19	12772189	12775570	chr19:12772189-12775570	0	-	12772189	12775449	789624	7	63,68,133,51,181,86,166,	0,423,590,804,2371,2622,3215,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12773951	12775572	chr19:12773951-12775572	0	-	12773951	12773951	8553170	2	946,168,	0,1453,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12773972	12778392	chr19:12773972-12778392	0	-	12773972	12773972	8553170	2	925,48,	0,4372,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	12774077	12775544	chr19:12774077-12775544	0	-	12774077	12774077	8553170	3	664,86,140,	0,734,1327,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	12774335	12778446	chr19:12774335-12778446	0	-	12774335	12774335	8553170	3	406,86,102,	0,476,4009,
#Partially deleted in new
chr19	12774501	12792582	chr19:12774501-12792582	2	-	12774501	12774501	8553170	3	240,86,259,	0,310,17822,
#Partially deleted in new
chr19	12774534	12778409	chr19:12774534-12778409	0	-	12774534	12774534	8553170	3	207,86,110,	0,277,3765,
#Deleted in new
chr19	12784538	12785101	chr19:12784538-12785101	3	-	12784538	12784538	8553170	2	71,317,	0,246,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	12787127	12787192	chr19:12787127-12787192	3	+	12787127	12787127	5263520	1	65,	0,
#Deleted in new
chr19	12791495	12793315	chr19:12791495-12793315	3	+	12791771	12792815	789624	1	1820,	0,
#Partially deleted in new
chr19	12796819	12801859	chr19:12796819-12801859	3	-	12797080	12801261	0	6	347,131,123,154,112,120,	0,3039,3357,4096,4339,4920,
#Partially deleted in new
chr19	12796819	12801787	chr19:12796819-12801787	1	-	12797135	12801261	789624	5	347,123,154,112,48,	0,3357,4096,4339,4920,
#Partially deleted in new
chr19	12796822	12801789	chr19:12796822-12801789	0	-	12796822	12796822	8553170	4	344,1211,112,50,	0,3036,4336,4917,
#Partially deleted in new
chr19	12796822	12801849	chr19:12796822-12801849	3	+	12796822	12796822	8553170	2	200,96,	0,4931,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12799555	12800247	chr19:12799555-12800247	0	-	12799555	12799555	8553170	2	434,71,	0,621,
#Deleted in new
chr19	12799861	12800461	chr19:12799861-12800461	0	-	12799861	12799861	8553170	2	128,285,	0,315,
#Deleted in new
chr19	12799915	12801788	chr19:12799915-12801788	0	-	12799915	12799915	8553170	4	384,154,112,49,	0,1000,1243,1824,
#Partially deleted in new
chr19	12802030	12806790	chr19:12802030-12806790	0	+	12802030	12802030	8553170	3	189,206,406,	0,2073,4354,
#Partially deleted in new
chr19	12802048	12804389	chr19:12802048-12804389	3	+	12802071	12804303	789624	2	171,286,	0,2055,
#Partially deleted in new
chr19	12802062	12813581	chr19:12802062-12813581	0	+	12802071	12804303	789624	9	157,206,72,124,88,138,88,124,254,	0,2041,4945,5143,5356,8008,8254,11020,11265,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	12806555	12815201	chr19:12806555-12815201	3	+	12806673	12813466	0	8	245,72,124,88,138,88,124,1874,	0,452,650,863,3515,3761,6527,6772,
#Partially deleted in new
chr19	12806591	12807503	chr19:12806591-12807503	0	+	12806591	12806591	8553170	2	738,85,	0,827,
#Partially deleted in new
chr19	12806604	12813335	chr19:12806604-12813335	0	+	12806673	12807435	789624	7	196,72,88,138,88,124,8,	0,403,814,3466,3712,6478,6723,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12806676	12807976	chr19:12806676-12807976	0	+	12806676	12807515	789624	4	124,72,124,558,	0,331,529,742,
#Partially deleted in new
chr19	12806683	12813525	chr19:12806683-12813525	0	+	12806683	12806683	8553170	6	396,301,138,88,124,198,	0,522,3387,3633,6399,6644,
#Partially deleted in new
chr19	12806845	12813447	chr19:12806845-12813447	0	+	12806845	12806845	8553170	7	234,124,88,138,88,124,120,	0,360,573,3225,3471,6237,6482,
#Partially deleted in new
chr19	12825477	12830675	chr19:12825477-12830675	1	-	12825705	12829979	789624	6	456,97,111,85,187,64,	0,1297,3179,3391,4333,5134,
#Partially deleted in new
chr19	12825477	12834576	chr19:12825477-12834576	1	-	12825705	12834500	789624	6	456,97,111,85,187,88,	0,1297,3179,3391,4333,9011,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	12825478	12835428	chr19:12825478-12835428	1	-	12826606	12835098	789624	7	1188,97,111,85,187,62,346,	0,1296,3178,3390,4332,9306,9604,
#Partially deleted in new
chr19	12825481	12835416	chr19:12825481-12835416	3	-	12825705	12835098	789624	7	452,97,111,85,187,62,334,	0,1293,3175,3387,4329,9303,9601,
#Partially deleted in new
chr19	12825482	12830416	chr19:12825482-12830416	1	-	12825705	12829979	789624	6	451,97,111,85,187,135,	0,1292,3174,3386,4328,4799,
#Partially deleted in new
chr19	12825710	12832983	chr19:12825710-12832983	3	+	12825710	12825710	8553170	3	202,108,429,	0,1074,6844,
#Partially deleted in new
chr19	12825753	12830655	chr19:12825753-12830655	0	-	12825753	12829979	789624	6	180,97,111,85,175,44,	0,1021,2903,3115,4057,4858,
#Partially deleted in new
chr19	12825797	12830662	chr19:12825797-12830662	0	-	12825797	12829979	789624	6	136,97,111,67,175,51,	0,977,2859,3071,4013,4814,
#Partially deleted in new
chr19	12825836	12830675	chr19:12825836-12830675	0	-	12825836	12829979	789624	6	97,97,111,85,187,64,	0,938,2820,3032,3974,4775,
#Partially deleted in new
chr19	12825841	12834548	chr19:12825841-12834548	0	-	12825841	12834500	789624	6	92,97,111,85,175,60,	0,933,2815,3027,3969,8647,
#Partially deleted in new
chr19	12826789	12830663	chr19:12826789-12830663	0	-	12826789	12829979	789624	5	82,111,160,187,52,	0,1867,2079,3021,3822,
#Partially deleted in new
chr19	12826845	12830349	chr19:12826845-12830349	0	-	12826845	12829979	789624	5	26,111,85,175,68,	0,1811,2023,2965,3436,
#Partially deleted in new
chr19	12828892	12835415	chr19:12828892-12835415	0	-	12828892	12829979	789624	3	43,187,631,	0,918,5892,
#Partially deleted in new
chr19	12828952	12835415	chr19:12828952-12835415	0	-	12828952	12835098	789624	4	76,187,62,333,	0,858,5832,6130,
#Partially deleted in new
chr19	12833950	12858864	chr19:12833950-12858864	1	+	12833967	12858813	789624	13	56,32,89,76,79,161,76,210,102,133,68,80,334,	0,4318,6495,7040,9578,13339,13661,13897,17983,18164,18377,24411,24580,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	12838472	12848979	chr19:12838472-12848979	0	+	12838472	12838472	8553170	6	183,89,76,161,76,1132,	0,1973,2518,8817,9139,9375,
#Partially deleted in new
chr19	12838533	12874951	chr19:12838533-12874951	3	+	12838572	12874870	0	26	122,89,76,79,161,76,210,102,133,68,80,209,139,133,166,102,123,110,179,248,207,230,123,137,188,1343,	0,1912,2457,4995,8756,9078,9314,13400,13581,13794,19828,19997,26275,26512,26782,27183,27446,28119,28940,29196,30109,30532,32290,32502,34790,35075,
#Partially deleted in new
chr19	12840502	12858921	chr19:12840502-12858921	0	+	12840502	12858813	789624	11	32,76,79,161,76,210,102,133,68,80,391,	0,488,3026,6787,7109,7345,11431,11612,11825,17859,18028,
#Deleted in new
chr19	12847234	12847801	chr19:12847234-12847801	0	+	12847234	12847234	8553170	2	216,190,	0,377,
#Partially deleted in new
chr19	12847818	12852171	chr19:12847818-12852171	0	+	12847818	12852171	789624	3	239,102,57,	0,4115,4296,
#Partially deleted in new
chr19	12852185	12865468	chr19:12852185-12865468	0	+	12852185	12852185	8553170	6	62,68,80,211,139,423,	0,142,6176,6345,12623,12860,
#Partially deleted in new
chr19	12852259	12852327	chr19:12852259-12852327	3	+	12852259	12852259	5263520	1	68,	0,
#Partially deleted in new
chr19	12868600	12873640	chr19:12868600-12873640	0	+	12868600	12868600	8553170	6	249,230,123,137,188,32,	0,465,2223,2435,4723,5008,
#Deleted in new
chr19	12873253	12874349	chr19:12873253-12874349	0	+	12873253	12873253	8553170	2	258,741,	0,355,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	12875210	12881468	chr19:12875210-12881468	3	-	12875989	12881375	789624	6	1153,198,165,79,181,179,	0,3171,3459,5591,5761,6079,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12875935	12878680	chr19:12875935-12878680	0	-	12875935	12875935	8553170	2	428,299,	0,2446,
#Partially deleted in new
chr19	12876253	12881466	chr19:12876253-12881466	0	-	12876253	12881375	789624	5	110,198,79,181,177,	0,2128,4548,4718,5036,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12878037	12878834	chr19:12878037-12878834	0	-	12878037	12878037	8553170	2	542,165,	0,632,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12880968	12884088	chr19:12880968-12884088	3	+	12880968	12880968	8553170	2	190,266,	0,2854,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	12884421	12887199	chr19:12884421-12887199	3	-	12884884	12887140	0	3	639,826,146,	0,895,2632,
#Partially deleted in new
chr19	12891025	12899969	chr19:12891025-12899969	3	+	12891304	12899541	0	12	177,125,36,144,63,171,130,217,104,126,161,502,	0,245,461,805,1090,2457,4966,5179,5884,6277,6677,8442,
#Partially deleted in new
chr19	12891159	12897477	chr19:12891159-12897477	0	+	12891159	12891159	8553170	8	43,125,144,171,130,217,104,175,	0,111,671,2323,4832,5045,5750,6143,
#Partially deleted in new
chr19	12891159	12895995	chr19:12891159-12895995	0	+	12891304	12895995	789624	6	43,125,36,144,171,4,	0,111,327,671,2323,4832,
#Partially deleted in new
chr19	12891159	12899946	chr19:12891159-12899946	1	+	12891304	12899541	0	11	236,36,144,63,171,130,217,104,126,161,479,	0,327,671,956,2323,4832,5045,5750,6143,6543,8308,
#Deleted in new
chr19	12891163	12892129	chr19:12891163-12892129	0	+	12891304	12891656	789624	5	39,125,174,144,14,	0,107,323,667,952,
#Partially deleted in new
chr19	12891167	12896015	chr19:12891167-12896015	0	+	12891304	12896015	789624	6	35,125,144,63,171,24,	0,103,663,948,2315,4824,
#Partially deleted in new
chr19	12891179	12899624	chr19:12891179-12899624	0	+	12891179	12891179	8553170	11	23,125,488,63,171,130,182,104,126,161,157,	0,91,307,936,2303,4812,5060,5730,6123,6523,8288,
#Partially deleted in new
chr19	12891179	12893882	chr19:12891179-12893882	0	+	12891179	12891179	8553170	6	23,125,36,144,63,400,	0,91,307,651,936,2303,
#Partially deleted in new
chr19	12891179	12893834	chr19:12891179-12893834	0	+	12891179	12891179	8553170	5	23,125,488,63,352,	0,91,307,936,2303,
#Deleted in new
chr19	12891268	12892283	chr19:12891268-12892283	0	+	12891268	12891268	8553170	4	127,36,144,168,	0,218,562,847,
#Partially deleted in new
chr19	12891268	12899678	chr19:12891268-12899678	0	+	12891268	12891268	8553170	10	127,36,144,63,171,130,217,104,561,211,	0,218,562,847,2214,4723,4936,5641,6034,8199,
#Deleted in new
chr19	12894132	12894880	chr19:12894132-12894880	7	+	12894132	12894132	16724991	1	748,	0,
#Deleted in new
chr19	12897302	12898383	chr19:12897302-12898383	0	+	12897302	12898184	789624	3	126,161,258,	0,400,823,
#Partially deleted in new
chr19	12897379	12914207	chr19:12897379-12914207	0	+	12897379	12914092	789624	3	49,161,213,	0,323,16615,
#Partially deleted in new
chr19	12898785	12919276	chr19:12898785-12919276	3	-	12899340	12919257	789624	6	600,117,189,175,116,34,	0,1218,1674,5706,19436,20457,
#Deleted in new
chr19	12899081	12900484	chr19:12899081-12900484	0	-	12899979	12900484	789624	3	304,160,25,	0,876,1378,
#Deleted in new
chr19	12899570	12900670	chr19:12899570-12900670	0	+	12899570	12899570	8553170	2	569,437,	0,663,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12904516	12906203	chr19:12904516-12906203	0	-	12904516	12904516	8553170	2	232,99,	0,1588,
#Partially deleted in new
chr19	12922478	12934037	chr19:12922478-12934037	1	-	12922747	12933896	789624	14	408,115,78,169,100,85,116,129,93,119,99,138,132,276,	0,1672,1970,2160,2425,2611,5863,6056,6276,7744,7950,8133,11071,11283,
#Partially deleted in new
chr19	12922479	12933715	chr19:12922479-12933715	3	-	12922747	12933696	0	13	407,115,78,169,100,85,116,129,93,119,99,138,166,	0,1671,1969,2159,2424,2610,5862,6055,6275,7743,7949,8132,11070,
#Partially deleted in new
chr19	12922479	12933714	chr19:12922479-12933714	1	-	12922747	12933696	0	12	407,115,78,169,100,85,116,129,119,99,138,165,	0,1671,1969,2159,2424,2610,5862,6055,7743,7949,8132,11070,
#Partially deleted in new
chr19	12922529	12933696	chr19:12922529-12933696	0	-	12928436	12933696	789624	13	357,115,78,169,100,85,116,91,93,119,99,138,147,	0,1621,1919,2109,2374,2560,5812,6043,6225,7693,7899,8082,11020,
#Partially deleted in new
chr19	12922539	12933696	chr19:12922539-12933696	0	-	12922539	12922539	8553170	12	347,115,78,365,85,116,129,93,119,99,138,147,	0,1611,1909,2099,2550,5802,5995,6215,7683,7889,8072,11010,
#Partially deleted in new
chr19	12922544	12928439	chr19:12922544-12928439	0	-	12922580	12928439	789624	5	104,127,100,85,98,	0,2136,2359,2545,5797,
#Partially deleted in new
chr19	12924150	12933680	chr19:12924150-12933680	0	-	12924150	12933680	789624	10	115,78,169,100,85,116,129,93,119,131,	0,298,488,753,939,4191,4384,4604,6072,9399,
#Partially deleted in new
chr19	12928397	12933698	chr19:12928397-12933698	0	-	12928397	12928397	8553170	6	266,93,119,99,138,149,	0,357,1825,2031,2214,5152,
#Partially deleted in new
chr19	12928409	12933642	chr19:12928409-12933642	0	-	12928409	12928409	8553170	6	48,129,93,119,321,93,	0,125,345,1813,2019,5140,
#Partially deleted in new
chr19	12930306	12933711	chr19:12930306-12933711	0	-	12930306	12933696	789624	3	221,138,162,	0,305,3243,
#Partially deleted in new
chr19	12930521	12933296	chr19:12930521-12933296	3	+	12930521	12930521	789624	3	25,68,148,	0,2448,2627,
#Deleted in new
chr19	12938577	12940147	chr19:12938577-12940147	0	+	12938577	12938577	8553170	3	658,204,95,	0,850,1475,
#Partially deleted in new
chr19	12938606	12944489	chr19:12938606-12944489	3	+	12938679	12943913	0	9	164,102,204,95,210,114,144,93,777,	0,527,821,1446,1636,1934,2137,4930,5106,
#Deleted in new
chr19	12938613	12940370	chr19:12938613-12940370	0	+	12938613	12938613	8553170	4	157,102,204,318,	0,520,814,1439,
#Deleted in new
chr19	12938644	12940872	chr19:12938644-12940872	0	+	12938679	12940872	789624	6	126,102,95,210,114,129,	0,489,1408,1598,1896,2099,
#Partially deleted in new
chr19	12940396	12944403	chr19:12940396-12944403	0	+	12940396	12943981	789624	6	56,114,144,93,44,462,	0,144,347,3140,3316,3545,
#Deleted in new
chr19	12940483	12940540	chr19:12940483-12940540	3	+	12940483	12940483	5263520	1	57,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12943212	12943962	chr19:12943212-12943962	0	+	12943212	12943212	8553170	2	417,250,	0,500,
#Deleted in new
chr19	12943872	12944489	chr19:12943872-12944489	0	+	12943872	12943913	789624	2	116,278,	0,339,
#Deleted in new
chr19	12944117	12944487	chr19:12944117-12944487	3	-	12944117	12944117	8553170	2	106,164,	0,206,
#Partially deleted in new
chr19	12945854	12953269	chr19:12945854-12953269	0	+	12945948	12948698	789624	8	166,162,182,128,79,134,165,334,	0,1993,2322,2831,3226,3420,6834,7081,
#Partially deleted in new
chr19	12945865	12949282	chr19:12945865-12949282	0	+	12945865	12945865	8553170	6	155,162,182,56,474,5,	0,1982,2311,2631,2820,3412,
#Partially deleted in new
chr19	12945875	12953623	chr19:12945875-12953623	1	+	12945948	12953049	0	9	145,162,182,56,128,79,131,165,688,	0,1972,2301,2621,2810,3205,3402,6813,7060,
#Partially deleted in new
chr19	12945887	12953642	chr19:12945887-12953642	3	+	12945948	12953049	0	9	133,162,182,56,128,79,134,165,707,	0,1960,2289,2609,2798,3193,3387,6801,7048,
#Partially deleted in new
chr19	12945891	12953591	chr19:12945891-12953591	1	+	12945948	12953049	0	8	129,162,182,56,128,79,134,656,	0,1956,2285,2605,2794,3189,3383,7044,
#Partially deleted in new
chr19	12945893	12953613	chr19:12945893-12953613	0	+	12945948	12948517	789624	9	127,162,182,39,128,79,131,165,678,	0,1954,2283,2620,2792,3187,3384,6795,7042,
#Partially deleted in new
chr19	12946004	12949576	chr19:12946004-12949576	0	+	12946004	12946004	8553170	8	16,162,182,56,128,79,131,78,	0,1843,2172,2492,2681,3076,3273,3494,
#Partially deleted in new
chr19	12948688	12953405	chr19:12948688-12953405	0	+	12948688	12949337	789624	4	125,134,165,470,	0,586,4000,4247,
#Partially deleted in new
chr19	12949083	12953595	chr19:12949083-12953595	0	+	12949083	12953049	789624	4	76,131,132,660,	0,194,3605,3852,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12952363	12952990	chr19:12952363-12952990	0	+	12952363	12952363	8553170	2	490,55,	0,572,
#Partially deleted in new
chr19	12953118	12957236	chr19:12953118-12957236	3	-	12954207	12957212	0	2	1408,374,	0,3744,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	12965158	12974524	chr19:12965158-12974524	1	+	12969570	12970528	789624	4	35,475,85,1136,	0,4351,5292,8230,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	12969481	12974762	chr19:12969481-12974762	3	+	12969660	12973634	789624	2	503,1374,	0,3907,
#Partially deleted in new
chr19	12995607	13096201	chr19:12995607-13096201	3	+	12995837	13090370	789624	10	257,532,63,75,121,137,123,176,92,1567,	0,29413,77439,77814,78298,79927,83005,86072,94691,99027,
#Partially deleted in new
chr19	12995837	13094649	chr19:12995837-13094649	1	+	12995837	13094649	789624	11	27,532,63,75,121,137,123,176,148,92,15,	0,29183,77209,77584,78068,79697,82775,85842,92151,94461,98797,
#Deleted in new
chr19	13012187	13025520	chr19:13012187-13025520	0	+	13025134	13025520	789624	2	79,500,	0,12833,
#Partially deleted in new
chr19	13012206	13081835	chr19:13012206-13081835	0	+	13025134	13073430	789624	8	60,348,63,75,121,137,123,156,	0,12814,60840,61215,61699,63328,66406,69473,
#Deleted in new
chr19	13013661	13014511	chr19:13013661-13014511	3	-	13013661	13013661	8553170	2	217,306,	0,544,
#Partially deleted in new
chr19	13023990	13094758	chr19:13023990-13094758	1	+	13024031	13090370	789624	10	44,532,63,75,121,137,123,176,92,124,	0,1030,49056,49431,49915,51544,54622,57689,66308,70644,
#Partially deleted in new
chr19	13024031	13094649	chr19:13024031-13094649	1	+	13024031	13094649	789624	11	3,532,63,75,121,137,123,176,148,92,15,	0,989,49015,49390,49874,51503,54581,57648,63957,66267,70603,
#Partially deleted in new
chr19	13024579	13098766	chr19:13024579-13098766	1	+	13024644	13090370	789624	10	101,532,63,75,121,137,176,92,351,79,	0,441,48467,48842,49326,50955,57100,65719,70055,74108,
#Partially deleted in new
chr19	13024579	13098796	chr19:13024579-13098796	1	+	13024644	13090370	789624	9	101,532,63,75,121,137,176,92,4162,	0,441,48467,48842,49326,50955,57100,65719,70055,
#Partially deleted in new
chr19	13024580	13094755	chr19:13024580-13094755	1	+	13025134	13094649	789624	11	104,532,63,75,121,137,123,176,148,92,121,	0,440,48466,48841,49325,50954,54032,57099,63408,65718,70054,
#Partially deleted in new
chr19	13024584	13094684	chr19:13024584-13094684	0	+	13024644	13025162	789624	11	98,532,63,75,121,137,123,176,148,92,50,	0,436,48462,48837,49321,50950,54028,57095,63404,65714,70050,
#Deleted in new
chr19	13024612	13025495	chr19:13024612-13025495	0	+	13024644	13025495	789624	2	107,475,	0,408,
#Deleted in new
chr19	13024626	13025510	chr19:13024626-13025510	0	+	13025134	13025510	789624	2	97,490,	0,394,
#Partially deleted in new
chr19	13024938	13094770	chr19:13024938-13094770	1	+	13024996	13090370	789624	9	614,63,75,121,137,123,176,92,136,	0,48108,48483,48967,50596,53674,56741,65360,69696,
#Deleted in new
chr19	13069791	13071374	chr19:13069791-13071374	3	-	13069791	13069791	8553170	1	1583,	0,
#Partially deleted in new
chr19	13070002	13074019	chr19:13070002-13074019	0	+	13070002	13070002	8553170	4	67,63,75,114,	0,3044,3419,3903,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	13081965	13082564	chr19:13081965-13082564	3	+	13081965	13081965	8553170	1	599,	0,
#Partially deleted in new
chr19	13099032	13102867	chr19:13099032-13102867	3	-	13099318	13101171	789624	4	702,92,359,337,	0,1624,1804,3498,
#Partially deleted in new
chr19	13100689	13103161	chr19:13100689-13103161	0	-	13100689	13100949	789624	3	59,212,631,	0,147,1841,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	13101177	13102724	chr19:13101177-13102724	0	-	13101177	13101177	8553170	1	1547,	0,
#Partially deleted in new
chr19	13104901	13116749	chr19:13104901-13116749	1	-	13104934	13116399	789624	17	180,130,120,77,109,86,135,70,87,149,113,116,188,143,56,286,97,	0,365,585,2672,2849,4479,4648,4867,5013,5256,7803,7994,10377,10724,11095,11244,11751,
#Partially deleted in new
chr19	13104901	13116649	chr19:13104901-13116649	1	-	13104934	13116399	789624	16	180,130,120,77,109,86,135,70,87,149,113,116,188,143,56,504,	0,365,585,2672,2849,4479,4648,4867,5013,5256,7803,7994,10377,10724,11095,11244,
#Partially deleted in new
chr19	13104906	13116657	chr19:13104906-13116657	1	-	13104934	13116399	789624	15	175,130,120,77,109,86,135,70,149,113,116,188,143,56,512,	0,360,580,2667,2844,4474,4643,4862,5251,7798,7989,10372,10719,11090,11239,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr19	13104906	13117567	chr19:13104906-13117567	3	-	13104934	13116399	789624	18	175,130,120,77,109,86,135,70,87,149,113,116,188,143,56,286,460,79,	0,360,580,2667,2844,4474,4643,4862,5008,5251,7798,7989,10372,10719,11090,11239,11746,12582,
#Partially deleted in new
chr19	13104906	13116740	chr19:13104906-13116740	0	-	13104906	13104906	8553170	16	175,340,77,109,86,135,70,87,149,113,116,188,143,56,195,88,	0,360,2667,2844,4474,4643,4862,5008,5251,7798,7989,10372,10719,11090,11239,11746,
#Partially deleted in new
chr19	13104938	13116725	chr19:13104938-13116725	0	-	13104938	13104938	8553170	15	143,340,77,109,86,135,70,87,149,113,103,188,143,435,73,	0,328,2635,2812,4442,4611,4830,4976,5219,7766,7970,10340,10687,11058,11714,
#Partially deleted in new
chr19	13107601	13109642	chr19:13107601-13109642	0	-	13107601	13107601	8553170	3	258,86,93,	0,1779,1948,
#Partially deleted in new
chr19	13107774	13109732	chr19:13107774-13109732	0	-	13107774	13107774	8553170	3	85,86,183,	0,1606,1775,
#Partially deleted in new
chr19	13109644	13116702	chr19:13109644-13116702	0	-	13109644	13113010	789624	8	40,70,87,149,113,116,188,50,	0,124,270,513,3060,3251,5634,7008,
#Partially deleted in new
chr19	13110157	13116712	chr19:13110157-13116712	0	-	13110157	13116399	789624	7	149,103,188,143,56,286,60,	0,2751,5121,5468,5839,5988,6495,
#Partially deleted in new
chr19	13110185	13116027	chr19:13110185-13116027	0	-	13113003	13116027	789624	6	121,113,116,124,143,31,	0,2519,2710,5093,5440,5811,
#Partially deleted in new
chr19	13112954	13116159	chr19:13112954-13116159	0	-	13112954	13112954	8553170	3	57,188,163,	0,2324,3042,
#Partially deleted in new
chr19	13113000	13116749	chr19:13113000-13116749	0	-	13115402	13116399	789624	4	11,188,286,97,	0,2278,3145,3652,
#Deleted in new
chr19	13115378	13116733	chr19:13115378-13116733	0	-	13115378	13115378	8553170	5	88,143,56,154,81,	0,247,618,808,1274,
#Deleted in new
chr19	13115422	13116736	chr19:13115422-13116736	0	-	13115422	13115422	8553170	3	44,326,84,	0,683,1230,
#Deleted in new
chr19	13115440	13116622	chr19:13115440-13116622	0	-	13115440	13115440	8553170	2	26,517,	0,665,
#Deleted in new
chr19	13115457	13116736	chr19:13115457-13116736	0	-	13116141	13116399	789624	4	9,143,326,84,	0,168,648,1195,
#Deleted in new
chr19	13115463	13116748	chr19:13115463-13116748	0	-	13115695	13116399	789624	5	3,143,56,245,96,	0,162,533,723,1189,
#Deleted in new
chr19	13115626	13116748	chr19:13115626-13116748	0	-	13115626	13115626	8553170	4	142,56,260,96,	0,370,545,1026,
#Deleted in new
chr19	13115701	13116721	chr19:13115701-13116721	0	-	13115701	13115701	8553170	2	730,69,	0,951,
#Deleted in new
chr19	13115835	13116759	chr19:13115835-13116759	0	-	13115835	13115835	8553170	2	505,107,	0,817,
#Deleted in new
chr19	13115870	13116736	chr19:13115870-13116736	0	-	13115870	13116399	789624	3	182,286,84,	0,275,782,
#Deleted in new
chr19	13115946	13116759	chr19:13115946-13116759	0	-	13115946	13115946	8553170	2	485,107,	0,706,
#Partially deleted in new
chr19	13118102	13135704	chr19:13118102-13135704	0	+	13135207	13135704	789624	2	29,505,	0,17097,
#Partially deleted in new
chr19	13118336	13141141	chr19:13118336-13141141	3	+	13135207	13138406	0	6	118,954,174,106,98,2995,	0,16863,17895,18934,19141,19810,
#Deleted in new
chr19	13137278	13138736	chr19:13137278-13138736	0	+	13137278	13138406	789624	2	36,579,	0,879,
#Deleted in new
chr19	13139616	13141147	chr19:13139616-13141147	3	-	13139616	13139616	8553170	2	331,127,	0,1404,
#Partially deleted in new
chr19	13144057	13150346	chr19:13144057-13150346	1	-	13144409	13150173	0	7	429,95,107,98,21,170,208,	0,519,706,1230,5515,5670,6081,
#Partially deleted in new
chr19	13144057	13150287	chr19:13144057-13150287	0	-	13144856	13150173	789624	6	429,95,107,108,185,149,	0,519,706,1230,5655,6081,
#Partially deleted in new
chr19	13144061	13150178	chr19:13144061-13150178	1	-	13144582	13150173	789624	8	425,95,103,108,63,95,170,40,	0,515,706,1226,4967,5437,5666,6077,
#Partially deleted in new
chr19	13144061	13149885	chr19:13144061-13149885	0	-	13144080	13149885	789624	7	78,95,107,108,63,95,158,	0,515,702,1226,4967,5437,5666,
#Partially deleted in new
chr19	13144061	13150226	chr19:13144061-13150226	3	-	13144508	13150173	789624	7	610,107,108,63,95,170,88,	0,702,1226,4967,5437,5666,6077,
#Partially deleted in new
chr19	13144088	13150238	chr19:13144088-13150238	1	-	13144409	13150173	0	8	398,95,107,108,63,95,170,100,	0,488,675,1199,4940,5410,5639,6050,
#Partially deleted in new
chr19	13144270	13149839	chr19:13144270-13149839	0	-	13144377	13149839	789624	7	133,95,107,108,63,95,112,	0,306,493,1017,4758,5228,5457,
#Partially deleted in new
chr19	13144488	13150341	chr19:13144488-13150341	0	-	13149587	13150173	789624	7	183,107,108,63,106,170,203,	0,275,799,4540,5010,5239,5650,
#Partially deleted in new
chr19	13144600	13150313	chr19:13144600-13150313	0	-	13144600	13149516	789624	5	71,107,108,63,815,	0,163,687,4428,4898,
#Partially deleted in new
chr19	13144614	13145414	chr19:13144614-13145414	0	-	13144614	13145414	789624	3	57,107,127,	0,149,673,
#Partially deleted in new
chr19	13145302	13150383	chr19:13145302-13150383	0	-	13145302	13149516	789624	4	93,63,95,656,	0,3726,4196,4425,
#Deleted in new
chr19	13150414	13154249	chr19:13150414-13154249	1	+	13153186	13153858	789624	2	138,1153,	0,2682,
#Deleted in new
chr19	13150432	13154908	chr19:13150432-13154908	3	+	13153186	13153858	789624	2	120,1965,	0,2511,
#Deleted in new
chr19	13151974	13154908	chr19:13151974-13154908	1	+	13153186	13153858	789624	1	2934,	0,
#Deleted in new
chr19	13153070	13153712	chr19:13153070-13153712	0	-	13153070	13153070	8553170	2	259,206,	0,436,
#Deleted in new
chr19	13153095	13154193	chr19:13153095-13154193	3	-	13153095	13153095	8553170	2	127,629,	0,469,
#Partially deleted in new
chr19	13157958	13158788	chr19:13157958-13158788	7	-	13157958	13157958	16724991	2	24,475,	0,355,
#Partially deleted in new
chr19	13206441	13506459	chr19:13206441-13506459	3	-	13207312	13506224	789624	47	1612,254,187,36,114,139,110,101,108,106,97,128,151,116,66,117,84,111,165,202,138,161,100,107,60,130,139,464,810,107,68,118,73,132,113,113,210,90,57,116,104,194,153,92,140,106,528,	0,2314,2870,4175,5661,5942,6189,7791,8059,18225,20989,23640,25268,28479,28767,29172,38740,46549,48653,50908,53122,55008,56292,69408,70627,76825,78626,80061,92102,94108,97104,97325,101340,101678,101974,106227,110670,123802,126427,127936,129364,153164,158875,165246,246434,248665,299490,
#Partially deleted in new
chr19	13206441	13506224	chr19:13206441-13506224	1	-	13207312	13506224	789624	48	1612,254,187,36,114,139,110,101,108,106,97,128,151,116,66,117,6,84,111,165,202,138,161,100,107,60,130,139,464,810,107,77,118,73,132,113,113,210,93,57,116,104,194,153,92,140,105,294,	0,2314,2870,4175,5661,5942,6189,7791,8059,18225,20989,23640,25268,28479,28767,29172,35079,38740,46549,48653,50908,53122,55008,56292,69408,70627,76825,78626,80061,92102,94108,97095,97325,101340,101678,101974,106227,110670,123802,126427,127936,129364,153164,158875,165246,246434,248665,299489,
#Partially deleted in new
chr19	13206444	13506480	chr19:13206444-13506480	1	-	13207312	13506224	789624	47	1609,254,187,36,114,139,110,101,108,106,97,128,151,116,66,117,84,111,165,202,138,161,100,107,60,130,139,464,810,107,68,118,73,132,113,113,210,93,57,116,104,194,153,92,140,106,549,	0,2311,2867,4172,5658,5939,6186,7788,8056,18222,22254,23637,25265,28476,28764,29169,38737,46546,48650,50905,53119,55005,56289,69405,70624,76822,78623,80058,92099,94105,97101,97322,101337,101675,101971,106224,110667,123799,126424,127933,129361,153161,158872,165243,246431,248662,299487,
#Partially deleted in new
chr19	13206445	13506495	chr19:13206445-13506495	1	-	13208045	13506224	789624	47	1603,254,187,36,114,139,110,101,108,106,97,128,151,116,66,117,84,111,165,202,138,161,100,107,60,130,139,464,810,107,68,118,73,132,113,113,210,93,57,116,104,194,153,92,140,106,564,	0,2310,2866,4171,5657,5938,6185,7787,8055,18221,20985,23636,25264,28475,28763,29168,38736,46545,48649,50904,53118,55004,56288,69404,70623,76821,78622,80057,92098,94104,97100,97321,101336,101674,101970,106223,110666,123798,126423,127932,129360,153160,158871,165242,246430,248661,299486,
#Partially deleted in new
chr19	13206445	13506503	chr19:13206445-13506503	1	-	13208045	13506224	789624	47	1603,254,187,36,114,139,110,101,108,106,97,128,151,116,66,117,84,111,165,202,138,161,100,107,60,130,139,464,810,107,68,118,73,132,113,113,210,93,57,116,104,194,153,92,140,106,572,	0,2310,2866,4171,5657,5938,6185,7787,8055,18221,22253,23636,25264,28475,28763,29168,38736,46545,48649,50904,53118,55004,56288,69404,70623,76821,78622,80057,92098,94104,97100,97321,101336,101674,101970,106223,110666,123798,126423,127932,129360,153160,158871,165242,246430,248661,299486,
#Partially deleted in new
chr19	13206493	13257400	chr19:13206493-13257400	0	-	13207312	13257400	789624	19	1560,254,187,114,139,110,101,108,106,97,128,151,116,66,117,84,111,165,51,	0,2262,2818,5609,5890,6137,7739,8007,18173,22205,23588,25216,28427,28715,29120,38688,46497,48601,50856,
#Partially deleted in new
chr19	13206590	13506459	chr19:13206590-13506459	1	-	13207312	13506224	789624	46	1463,254,187,36,114,139,110,101,108,106,97,128,151,116,66,117,84,111,165,202,138,161,100,107,60,130,139,464,810,107,68,118,73,132,113,113,210,93,57,116,104,194,153,92,140,493,	0,2165,2721,4026,5512,5793,6040,7642,7910,18076,22108,23491,25119,28330,28618,29023,38591,46400,48504,50759,52973,54859,56143,69259,70478,76676,78477,79912,91953,93959,96955,97176,101191,101529,101825,106078,110521,123653,126278,127787,129215,153015,158726,165097,246285,299376,
#Partially deleted in new
chr19	13206739	13506272	chr19:13206739-13506272	1	-	13207919	13506224	789624	47	1306,254,187,36,114,139,110,101,108,106,97,128,151,116,66,117,84,111,165,202,138,161,100,107,60,130,139,464,810,107,68,118,73,132,113,113,210,93,57,116,104,194,153,92,140,106,341,	0,2016,2572,3877,5363,5644,5891,7493,7761,17927,21959,23342,24970,28181,28469,28874,38442,46251,48355,50610,52824,54710,55994,69110,70329,76527,78328,79763,91804,93810,96806,97027,101042,101380,101676,105929,110372,123504,126129,127638,129066,152866,158577,164948,246136,248367,299192,
#Partially deleted in new
chr19	13207265	13253011	chr19:13207265-13253011	0	-	13207312	13253011	789624	18	788,254,187,114,139,110,101,108,106,97,128,151,116,66,117,6,84,21,	0,1490,2046,4837,5118,5365,6967,7235,17401,20165,22816,24444,27655,27943,28348,34255,37916,45725,
#Partially deleted in new
chr19	13207273	13506460	chr19:13207273-13506460	1	-	13208045	13506224	789624	48	775,254,187,36,114,139,110,101,108,106,97,128,151,116,66,117,6,84,111,165,202,138,161,100,107,60,130,139,464,810,107,77,118,73,132,113,113,210,93,57,116,104,194,153,92,140,106,529,	0,1482,2038,3343,4829,5110,5357,6959,7227,17393,20157,22808,24436,27647,27935,28340,34247,37908,45717,47821,50076,52290,54176,55460,68576,69795,75993,77794,79229,91270,93276,96263,96493,100508,100846,101142,105395,109838,122970,125595,127104,128532,152332,158043,164414,245602,247833,298658,
#Partially deleted in new
chr19	13207273	13506460	chr19:13207273-13506460	1	-	13207312	13506224	789624	48	780,254,187,36,114,139,110,101,108,106,97,128,151,116,66,117,6,84,111,165,202,138,161,100,107,60,130,139,464,810,107,77,118,73,132,113,113,210,93,57,116,104,194,153,92,140,106,529,	0,1482,2038,3343,4829,5110,5357,6959,7227,17393,20157,22808,24436,27647,27935,28340,34247,37908,45717,47821,50076,52290,54176,55460,68576,69795,75993,77794,79229,91270,93276,96263,96493,100508,100846,101142,105395,109838,122970,125595,127104,128532,152332,158043,164414,245602,247833,298658,
#Partially deleted in new
chr19	13207300	13506224	chr19:13207300-13506224	1	-	13207312	13506224	789624	47	753,254,187,36,114,139,110,101,108,106,97,128,151,116,66,117,84,111,165,202,138,161,100,107,60,130,139,464,810,107,68,118,73,132,113,113,210,93,57,116,104,194,153,92,140,106,293,	0,1455,2011,3316,4802,5083,5330,6932,7200,17366,20130,22781,24409,27620,27908,28313,37881,45690,47794,50049,52263,54149,55433,68549,69768,75966,77767,79202,91243,93249,96245,96466,100481,100819,101115,105368,109811,122943,125568,127077,128505,152305,158016,164387,245575,247806,298631,
#Partially deleted in new
chr19	13207300	13506224	chr19:13207300-13506224	1	-	13207312	13506224	789624	46	753,254,187,114,139,110,101,108,106,97,128,151,116,66,117,84,111,165,202,138,161,100,107,60,130,139,464,810,107,68,118,73,132,113,113,210,93,57,116,104,194,153,92,140,106,293,	0,1455,2011,4802,5083,5330,6932,7200,17366,20130,22781,24409,27620,27908,28313,37881,45690,47794,50049,52263,54149,55433,68549,69768,75966,77767,79202,91243,93249,96245,96466,100481,100819,101115,105368,109811,122943,125568,127077,128505,152305,158016,164387,245575,247806,298631,
#Partially deleted in new
chr19	13207301	13506255	chr19:13207301-13506255	1	-	13207312	13506224	789624	47	752,254,187,36,114,139,110,101,108,106,97,128,151,116,66,117,84,111,165,202,138,161,100,107,60,130,139,464,810,107,68,118,73,132,113,113,210,96,57,116,104,194,153,92,140,106,324,	0,1454,2010,3315,4801,5082,5329,6931,7199,17365,21397,22780,24408,27619,27907,28312,37880,45689,47793,50048,52262,54148,55432,68548,69767,75965,77766,79201,91242,93248,96244,96465,100480,100818,101114,105367,109810,122942,125567,127076,128504,152304,158015,164386,245574,247805,298630,
#Partially deleted in new
chr19	13207660	13506224	chr19:13207660-13506224	1	-	13208045	13506224	789624	46	388,254,187,114,139,110,101,108,106,97,128,151,116,66,117,84,111,165,202,138,161,100,107,60,130,139,464,810,107,68,118,73,132,113,113,210,93,57,116,104,194,153,92,140,106,293,	0,1095,1651,4442,4723,4970,6572,6840,17006,19770,22421,24049,27260,27548,27953,37521,45330,47434,49689,51903,53789,55073,68189,69408,75606,77407,78842,90883,92889,95885,96106,100121,100459,100755,105008,109451,122583,125208,126717,128145,151945,157656,164027,245215,247446,298271,
#Partially deleted in new
chr19	13208018	13506255	chr19:13208018-13506255	1	-	13208045	13506224	789624	47	30,254,187,36,114,139,110,101,108,106,97,128,151,116,66,117,84,111,165,202,138,161,100,107,60,130,139,464,810,107,68,118,73,132,113,113,210,96,57,116,104,194,153,92,140,106,324,	0,737,1293,2598,4084,4365,4612,6214,6482,16648,20680,22063,23691,26902,27190,27595,37163,44972,47076,49331,51545,53431,54715,67831,69050,75248,77049,78484,90525,92531,95527,95748,99763,100101,100397,104650,109093,122225,124850,126359,127787,151587,157298,163669,244857,247088,297913,
#Partially deleted in new
chr19	13208045	13253011	chr19:13208045-13253011	0	-	13208045	13253011	789624	16	3,254,187,36,114,139,110,101,108,106,151,116,117,6,84,21,	0,710,1266,2571,4057,4338,4585,6187,6455,16621,23664,26875,27568,33475,37136,44945,
#Partially deleted in new
chr19	13208045	13506224	chr19:13208045-13506224	1	-	13208045	13506224	789624	48	3,254,187,36,114,139,110,101,108,106,97,128,151,116,66,117,6,84,111,165,202,138,161,100,107,60,130,139,464,810,107,68,118,73,132,113,113,210,93,57,116,104,194,153,92,140,106,293,	0,710,1266,2571,4057,4338,4585,6187,6455,16621,19385,22036,23664,26875,27163,27568,33475,37136,44945,47049,49304,51518,53404,54688,67804,69023,75221,77022,78457,90498,92504,95500,95721,99736,100074,100370,104623,109066,122198,124823,126332,127760,151560,157271,163642,244830,247061,297886,
#Partially deleted in new
chr19	13208891	13225314	chr19:13208891-13225314	0	-	13208891	13208891	8553170	8	118,187,1600,139,110,101,108,648,	0,420,1725,3492,3739,5341,5609,15775,
#Partially deleted in new
chr19	13208995	13231736	chr19:13208995-13231736	0	-	13224699	13231736	789624	10	14,187,114,139,110,101,108,106,128,27,	0,316,3107,3388,3635,5237,5505,15671,21086,22714,
#Partially deleted in new
chr19	13212706	13255247	chr19:13212706-13255247	0	-	13212706	13255247	789624	14	34,101,108,106,97,128,151,116,66,117,6,84,111,153,	0,1526,1794,11960,15992,17375,19003,22214,22502,22907,28814,32475,40284,42388,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	13213718	13215234	chr19:13213718-13215234	0	-	13213718	13213718	8553170	1	1516,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	13213782	13226555	chr19:13213782-13226555	0	-	13213782	13213782	8553170	3	551,108,1889,	0,718,10884,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	13213867	13214551	chr19:13213867-13214551	0	-	13213867	13213867	8553170	2	466,51,	0,633,
#Partially deleted in new
chr19	13214439	13224956	chr19:13214439-13224956	0	-	13214439	13214439	8553170	2	169,290,	0,10227,
#Deleted in new
chr19	13226942	13227682	chr19:13226942-13227682	0	-	13226942	13226942	8553170	1	740,	0,
#Partially deleted in new
chr19	13228616	13235674	chr19:13228616-13235674	0	-	13228616	13228616	8553170	6	179,128,151,116,66,61,	0,1465,3093,6304,6592,6997,
#Partially deleted in new
chr19	13228789	13245215	chr19:13228789-13245215	0	-	13236579	13245215	789624	8	6,128,151,116,117,170,6,34,	0,1292,2920,6131,6824,7659,12731,16392,
#Partially deleted in new
chr19	13229061	13253080	chr19:13229061-13253080	0	-	13229061	13229061	8553170	8	54,128,151,116,66,117,84,90,	0,1020,2648,5859,6147,6552,16120,23929,
#Partially deleted in new
chr19	13229688	13262811	chr19:13229688-13262811	0	-	13229688	13229688	8553170	12	521,151,116,66,117,84,111,165,202,138,161,78,	0,2021,5232,5520,5925,15493,23302,25406,27661,29875,31761,33045,
#Partially deleted in new
chr19	13230131	13245518	chr19:13230131-13245518	0	-	13230131	13230131	8553170	7	78,151,116,66,117,6,337,	0,1578,4789,5077,5482,11389,15050,
#Partially deleted in new
chr19	13230132	13255098	chr19:13230132-13255098	0	-	13236579	13255098	789624	9	77,151,116,66,117,170,84,111,4,	0,1577,4788,5076,5481,6316,15049,22858,24962,
#Partially deleted in new
chr19	13231768	13252995	chr19:13231768-13252995	0	-	13236579	13252995	789624	8	92,116,66,117,170,6,84,5,	0,3152,3440,3845,4680,9752,13413,21222,
#Partially deleted in new
chr19	13231768	13259607	chr19:13231768-13259607	0	-	13231768	13259607	789624	6	92,116,66,117,202,44,	0,3152,3440,3845,25581,27795,
#Partially deleted in new
chr19	13234807	13235885	chr19:13234807-13235885	0	-	13234807	13234807	8553170	3	229,66,272,	0,401,806,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	13243670	13245645	chr19:13243670-13245645	0	-	13243670	13243670	8553170	1	1975,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	13243768	13286521	chr19:13243768-13286521	0	-	13243768	13243768	8553170	12	1497,111,165,202,138,161,100,107,60,130,139,19,	0,9222,11326,13581,15795,17681,18965,32081,33300,39498,41299,42734,
#Partially deleted in new
chr19	13245208	13263144	chr19:13245208-13263144	0	-	13245208	13245208	8553170	7	57,111,165,202,138,161,411,	0,7782,9886,12141,14355,16241,17525,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	13252516	13286547	chr19:13252516-13286547	0	-	13252516	13252516	8553170	11	585,165,202,138,161,100,107,60,130,139,45,	0,2578,4833,7047,8933,10217,23333,24552,30750,32551,33986,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	13252566	13263510	chr19:13252566-13263510	0	-	13252566	13252566	8553170	6	535,165,202,138,161,777,	0,2528,4783,6997,8883,10167,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	13256187	13259166	chr19:13256187-13259166	0	-	13256187	13256187	8553170	1	2979,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	13256254	13260234	chr19:13256254-13260234	0	-	13256254	13256254	8553170	2	1297,671,	0,3309,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	13259365	13262705	chr19:13259365-13262705	0	-	13259365	13259365	8553170	1	3340,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	13271340	13277933	chr19:13271340-13277933	0	-	13271340	13271340	8553170	2	4616,865,	0,5728,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	13273497	13286554	chr19:13273497-13286554	0	-	13273497	13273497	8553170	5	2459,60,130,139,52,	0,3571,9769,11570,13005,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	13273937	13284568	chr19:13273937-13284568	0	-	13273937	13273937	8553170	3	2019,60,1302,	0,3131,9329,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	13307278	13308831	chr19:13307278-13308831	0	-	13307278	13307278	8553170	3	576,132,416,	0,841,1137,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	13307346	13365459	chr19:13307346-13365459	0	-	13307346	13307346	8553170	11	508,132,113,113,210,93,57,116,104,194,143,	0,773,1069,5322,9765,22897,25522,27031,28459,52259,57970,
#Partially deleted in new
chr19	13312651	13334436	chr19:13312651-13334436	0	-	13312651	13312651	8553170	5	130,210,96,57,59,	0,4460,17592,20217,21726,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	13315237	13317127	chr19:13315237-13317127	0	-	13315237	13315237	8553170	1	1890,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	13333639	13505939	chr19:13333639-13505939	0	-	13333639	13333639	8553170	8	854,104,194,153,92,140,106,8,	0,2166,25966,31677,38048,119236,121467,172292,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	13362050	13506112	chr19:13362050-13506112	0	-	13362050	13362050	8553170	5	3419,92,140,106,181,	0,9637,90825,93056,143881,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	13362404	13366298	chr19:13362404-13366298	0	-	13362404	13362404	8553170	1	3894,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	13370790	13506042	chr19:13370790-13506042	0	-	13370790	13370790	8553170	4	989,140,106,111,	0,82085,84316,135141,
#Partially deleted in new
chr19	13371760	13633025	chr19:13371760-13633025	0	-	13371760	13599819	789624	6	19,140,83,304,257,100,	0,81115,83346,227992,252117,261165,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	13450341	13506232	chr19:13450341-13506232	0	-	13450341	13450341	8553170	3	2674,106,301,	0,4765,55590,
#Partially deleted in new
chr19	13518796	13624489	chr19:13518796-13624489	1	-	13519462	13599819	789624	3	707,304,612,	0,80956,105081,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	13518974	13520309	chr19:13518974-13520309	0	-	13518974	13518974	8553170	2	529,144,	0,1191,
#Partially deleted in new
chr19	13731759	13759121	chr19:13731759-13759121	0	+	13731759	13731759	8553170	8	172,111,204,54,83,56,61,254,	0,415,19848,22529,24437,25658,26026,27108,
#Partially deleted in new
chr19	13731759	13763296	chr19:13731759-13763296	3	+	13751808	13763068	789624	11	191,111,204,54,83,56,61,143,173,139,707,	0,415,19848,22529,24437,25658,26026,27108,27340,30539,30830,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	13731761	13732602	chr19:13731761-13732602	0	+	13731761	13731761	8553170	2	189,428,	0,413,
#Partially deleted in new
chr19	13731766	13759153	chr19:13731766-13759153	0	+	13731766	13731766	8553170	8	302,111,204,54,83,56,61,286,	0,408,19841,22522,24430,25651,26019,27101,
#Partially deleted in new
chr19	13747778	13763292	chr19:13747778-13763292	1	+	13751808	13763068	789624	10	176,204,54,83,56,61,143,173,139,703,	0,3829,6510,8418,9639,10007,11089,11321,14520,14811,
#Partially deleted in new
chr19	13747863	13763279	chr19:13747863-13763279	0	+	13747863	13747863	8553170	9	91,204,54,83,56,61,405,139,690,	0,3744,6425,8333,9554,9922,11004,14435,14726,
#Partially deleted in new
chr19	13747896	13762736	chr19:13747896-13762736	0	+	13757424	13762736	789624	9	58,54,83,56,61,143,173,139,147,	0,6392,8300,9521,9889,10971,11203,14402,14693,
#Partially deleted in new
chr19	13756207	13759478	chr19:13756207-13759478	0	+	13756207	13759355	789624	5	72,56,61,143,362,	0,1210,1578,2660,2909,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	13758907	13759627	chr19:13758907-13759627	0	+	13758907	13759090	789624	1	720,	0,
#Partially deleted in new
chr19	13759075	13762931	chr19:13759075-13762931	0	+	13759075	13759075	8553170	4	197,78,139,342,	0,2415,3223,3514,
#Partially deleted in new
chr19	13759110	13763023	chr19:13759110-13763023	0	+	13759110	13762445	789624	2	162,725,	0,3188,
#Partially deleted in new
chr19	13761390	13762973	chr19:13761390-13762973	0	+	13761390	13761390	8553170	3	178,139,384,	0,908,1199,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	13764531	13774282	chr19:13764531-13774282	1	+	13764588	13772281	0	6	189,239,89,123,225,2162,	0,339,3827,4083,4292,7589,
#Partially deleted in new
chr19	13764531	13768680	chr19:13764531-13768680	0	+	13764531	13764531	8553170	4	189,239,112,322,	0,339,1422,3827,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	13764548	13772866	chr19:13764548-13772866	3	+	13764588	13772281	0	6	172,239,176,177,225,746,	0,322,1405,4012,4275,7572,
#Partially deleted in new
chr19	13764548	13768870	chr19:13764548-13768870	0	+	13764548	13764548	8553170	4	172,239,176,310,	0,322,1405,4012,
#Partially deleted in new
chr19	13764548	13768557	chr19:13764548-13768557	0	+	13764548	13764548	8553170	4	172,239,176,199,	0,322,1405,3810,
#Partially deleted in new
chr19	13764580	13768581	chr19:13764580-13768581	0	+	13764580	13764580	8553170	3	140,239,223,	0,290,3778,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	13772117	13773633	chr19:13772117-13773633	1	-	13772117	13772117	8553170	2	188,377,	0,1139,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	13772405	13773631	chr19:13772405-13773631	0	-	13772405	13772405	8553170	2	53,375,	0,851,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	13772472	13774118	chr19:13772472-13774118	3	-	13772472	13772472	8553170	2	161,302,	0,1344,
#Partially deleted in new
chr19	13774167	13778461	chr19:13774167-13778461	3	+	13774477	13778198	789624	3	407,56,410,	0,484,3884,
#Partially deleted in new
chr19	13774478	13778459	chr19:13774478-13778459	0	+	13774478	13778198	789624	2	96,408,	0,3573,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	13774517	13778461	chr19:13774517-13778461	0	+	13774517	13775506	789624	4	57,56,143,410,	0,134,953,3534,
#Partially deleted in new
chr19	13774560	13778403	chr19:13774560-13778403	0	+	13774560	13774578	8553170	2	147,352,	0,3491,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	13774566	13778207	chr19:13774566-13778207	0	+	13774566	13775506	789624	4	8,56,137,156,	0,85,910,3485,
#Partially deleted in new
chr19	13774823	13778462	chr19:13774823-13778462	1	+	13774879	13778198	789624	2	80,411,	0,3228,
#Partially deleted in new
chr19	13795459	13832230	chr19:13795459-13832230	3	+	13795648	13831050	789624	13	342,202,357,149,151,168,138,255,136,155,164,82,2040,	0,4260,9332,13376,13610,17537,21756,22262,23897,27886,30090,33185,34731,
#Deleted in new
chr19	13796573	13796933	chr19:13796573-13796933	3	-	13796573	13796573	8553170	1	360,	0,
#Partially deleted in new
chr19	13805060	13831274	chr19:13805060-13831274	0	+	13805060	13831050	789624	12	88,149,151,168,351,138,255,136,155,164,82,1084,	0,3775,4009,7936,9454,12155,12661,14296,18285,20489,23584,25130,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	13815061	13815319	chr19:13815061-13815319	3	-	13815061	13815061	8553170	1	258,	0,
#Partially deleted in new
chr19	13817698	13830415	chr19:13817698-13830415	0	+	13817698	13830415	789624	5	202,46,164,82,225,	0,5756,7851,10946,12492,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	13823879	13842928	chr19:13823879-13842928	3	-	13823879	13823879	8553170	1	19049,	0,
#Deleted in new
chr19	13836286	13836359	chr19:13836286-13836359	3	-	13836286	13836286	5263520	1	73,	0,
#Deleted in new
chr19	13836439	13836517	chr19:13836439-13836517	3	-	13836439	13836439	5263520	1	78,	0,
#Deleted in new
chr19	13836586	13836659	chr19:13836586-13836659	3	-	13836586	13836586	5263520	1	73,	0,
#Partially deleted in new
chr19	13862062	13880755	chr19:13862062-13880755	0	+	13862062	13862062	789624	2	132,314,	0,18379,
#Partially deleted in new
chr19	13865416	13880757	chr19:13865416-13880757	0	+	13865416	13865416	8553170	3	21,98,316,	0,12251,15025,
#Deleted in new
chr19	13874698	13874808	chr19:13874698-13874808	3	+	13874698	13874698	5263520	1	110,	0,
#Deleted in new
chr19	13874874	13875011	chr19:13874874-13875011	3	+	13874874	13874874	5263520	1	137,	0,
#Partially deleted in new
chr19	13877246	13880503	chr19:13877246-13880503	3	+	13877248	13880503	789624	2	519,62,	0,3195,
#Partially deleted in new
chr19	13877248	13880750	chr19:13877248-13880750	1	+	13877248	13880503	789624	3	126,334,309,	0,183,3193,
#Partially deleted in new
chr19	13882347	13888380	chr19:13882347-13888380	0	-	13882801	13888380	789624	3	605,95,18,	0,3613,6015,
#Partially deleted in new
chr19	13882354	13906165	chr19:13882354-13906165	3	-	13882801	13904892	789624	8	598,95,1275,105,82,175,52,107,	0,3606,6833,10431,10787,13017,22507,23704,
#Partially deleted in new
chr19	13882354	13904892	chr19:13882354-13904892	1	-	13882801	13904892	789624	8	598,93,95,1275,105,82,175,31,	0,953,3606,6833,10431,10787,13017,22507,
#Partially deleted in new
chr19	13882388	13906107	chr19:13882388-13906107	1	-	13882801	13904892	789624	8	564,93,95,105,82,175,52,393,	0,919,3572,10397,10753,12983,22473,23326,
#Deleted in new
chr19	13882600	13883600	chr19:13882600-13883600	0	-	13882600	13882600	8553170	2	352,293,	0,707,
#Partially deleted in new
chr19	13884934	13889436	chr19:13884934-13889436	0	-	13885083	13889436	789624	3	225,95,249,	0,1026,4253,
#Partially deleted in new
chr19	13885269	13889941	chr19:13885269-13889941	0	-	13885432	13889941	789624	3	200,95,754,	0,691,3918,
#Partially deleted in new
chr19	13893179	13906452	chr19:13893179-13906452	0	-	13893179	13904892	789624	3	44,52,264,	0,11682,13009,
#Partially deleted in new
chr19	13906200	13930879	chr19:13906200-13930879	3	+	13906441	13930395	789624	29	301,136,116,66,135,235,125,73,72,131,73,134,112,173,123,59,117,74,59,52,100,91,138,65,64,127,77,48,505,	0,3622,6122,6327,6967,7203,11869,12303,12545,12711,12929,13617,14356,14549,17132,17347,17494,20316,20466,20620,20777,20974,21692,21923,23178,23333,23877,24041,24174,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	13906202	13920381	chr19:13906202-13920381	0	+	13906202	13906202	8553170	10	299,136,135,235,125,73,72,131,73,564,	0,3620,6965,7201,11867,12301,12543,12709,12927,13615,
#Partially deleted in new
chr19	13906441	13930659	chr19:13906441-13930659	1	+	13906441	13930395	789624	29	60,136,116,66,135,235,125,73,72,131,73,134,112,173,123,59,117,74,59,52,100,91,138,62,64,127,77,48,285,	0,3381,5881,6086,6726,6962,11628,12062,12304,12470,12688,13376,14115,14308,16891,17106,17253,20075,20225,20379,20536,20733,21451,21685,22937,23092,23636,23800,23933,
#Partially deleted in new
chr19	13913252	13930879	chr19:13913252-13930879	0	+	13913252	13923424	789624	24	50,235,125,73,72,131,73,112,173,123,59,117,74,59,52,100,91,138,65,64,127,77,48,505,	0,151,4817,5251,5493,5659,5877,7304,7497,10080,10295,10442,13264,13414,13568,13725,13922,14640,14871,16126,16281,16825,16989,17122,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr19	13918506	13929537	chr19:13918506-13929537	0	+	13918506	13918506	8553170	17	70,72,131,73,134,112,173,123,59,117,74,59,52,1053,65,64,4,	0,239,405,623,1311,2050,2243,4826,5041,5188,8010,8160,8314,8471,9617,10872,11027,
#Partially deleted in new
chr19	13919693	13923399	chr19:13919693-13923399	0	+	13919693	13919693	8553170	4	258,112,173,67,	0,863,1056,3639,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	13920276	13923753	chr19:13920276-13923753	0	+	13920276	13920276	8553170	5	392,173,123,59,59,	0,473,3056,3271,3418,
#Partially deleted in new
chr19	13923327	13930845	chr19:13923327-13930845	0	+	13923327	13930395	789624	15	128,59,117,74,59,52,100,91,138,62,64,127,77,48,471,	0,220,367,3189,3339,3493,3650,3847,4565,4799,6051,6206,6750,6914,7047,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	13923578	13927553	chr19:13923578-13927553	0	+	13923578	13923578	8553170	7	28,117,74,59,52,100,379,	0,116,2938,3088,3242,3399,3596,
#Partially deleted in new
chr19	13931186	13932944	chr19:13931186-13932944	0	-	13931851	13932944	789624	2	926,147,	0,1611,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	13931186	13938476	chr19:13931186-13938476	1	-	13932704	13938202	789624	8	2269,116,157,110,65,94,222,298,	0,2691,3067,4534,4793,5180,6598,6992,
#Partially deleted in new
chr19	13931460	13938292	chr19:13931460-13938292	3	-	13931736	13938181	789624	10	427,149,658,116,157,110,65,94,222,114,	0,503,1337,2417,2793,4260,4519,4906,6324,6718,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	13931471	13953381	chr19:13931471-13953381	1	-	13932704	13953136	789624	6	1984,116,65,94,222,263,	0,2406,4508,4895,6313,21647,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	13932352	13938476	chr19:13932352-13938476	1	-	13932704	13938181	789624	8	1103,116,157,110,65,94,222,298,	0,1525,1901,3368,3627,4014,5432,5826,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	13932354	13938065	chr19:13932354-13938065	1	-	13932704	13937849	789624	6	1101,116,157,110,94,281,	0,1523,1899,3366,4012,5430,
#Partially deleted in new
chr19	13932667	13953392	chr19:13932667-13953392	1	-	13932704	13953136	789624	8	788,116,157,110,65,94,222,274,	0,1210,1586,3053,3312,3699,5117,20451,
#Partially deleted in new
chr19	13933208	13936029	chr19:13933208-13936029	0	-	13933208	13936029	789624	4	247,116,132,50,	0,669,1045,2771,
#Deleted in new
chr19	13933237	13934362	chr19:13933237-13934362	0	-	13933237	13934362	789624	3	218,116,120,	0,640,1005,
#Partially deleted in new
chr19	13933238	13938096	chr19:13933238-13938096	0	-	13933238	13937849	789624	4	217,116,94,312,	0,639,3128,4546,
#Partially deleted in new
chr19	13933878	13937885	chr19:13933878-13937885	0	-	13933878	13933878	8553170	4	115,110,94,101,	0,1842,2488,3906,
#Partially deleted in new
chr19	13933956	13953302	chr19:13933956-13953302	0	-	13933956	13953136	789624	4	37,94,222,184,	0,2410,3828,19162,
#Partially deleted in new
chr19	13936428	13953383	chr19:13936428-13953383	0	-	13936428	13937849	789624	4	32,222,119,189,	0,1356,3468,16766,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	13949287	13953277	chr19:13949287-13953277	0	-	13949287	13949287	8553170	2	343,159,	0,3831,
#Partially deleted in new
chr19	13952491	13961449	chr19:13952491-13961449	3	+	13952512	13960995	789624	13	153,98,136,107,140,171,435,92,129,86,105,116,510,	0,1848,2034,3420,3631,3860,6553,7090,7275,7492,7795,7973,8448,
#Partially deleted in new
chr19	13952515	13954437	chr19:13952515-13954437	0	+	13952515	13953065	789624	3	129,279,98,	0,514,1824,
#Partially deleted in new
chr19	13956408	13959847	chr19:13956408-13959847	0	+	13956408	13959847	789624	3	114,435,266,	0,2636,3173,
#Deleted in new
chr19	13959560	13961101	chr19:13959560-13961101	0	+	13959560	13960995	789624	6	113,129,86,105,116,162,	0,206,423,726,904,1379,
#Deleted in new
chr19	13959583	13961329	chr19:13959583-13961329	0	+	13959583	13959583	8553170	5	90,129,86,294,390,	0,183,400,703,1356,
#Deleted in new
chr19	13959985	13960489	chr19:13959985-13960489	0	+	13959985	13959985	8553170	2	406,25,	0,479,
#Partially deleted in new
chr19	13961537	14006285	chr19:13961537-14006285	3	-	13962694	13993843	0	21	1327,46,154,209,150,98,152,110,119,116,120,182,385,95,96,117,108,84,110,371,183,	0,1456,1584,2000,2320,3911,4088,4883,5095,7027,7237,8456,11205,16454,17909,19035,20583,21649,21948,31987,44565,
#Deleted in new
chr19	13963703	13964055	chr19:13963703-13964055	0	-	13963703	13963703	8553170	2	43,198,	0,154,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	13969639	14006322	chr19:13969639-14006322	0	-	13969639	13969639	8553170	10	536,385,95,96,117,108,84,110,371,220,	0,3103,8352,9807,10933,12481,13547,13846,23885,36463,
#Partially deleted in new
chr19	13983027	14006289	chr19:13983027-14006289	0	-	13983027	13983027	8553170	3	243,110,187,	0,458,23075,
#Partially deleted in new
chr19	13983068	14006267	chr19:13983068-14006267	0	-	13983068	13983068	8553170	4	202,110,371,165,	0,417,10456,23034,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	13983312	14006262	chr19:13983312-14006262	0	-	13983312	13993843	789624	5	45,110,371,200,160,	0,173,10212,14805,22790,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	13998167	14007039	chr19:13998167-14007039	0	-	13998167	13998167	8553170	2	150,290,	0,8582,
#Deleted in new
chr19	14006421	14006773	chr19:14006421-14006773	3	+	14006421	14006421	8553170	1	352,	0,
#Partially deleted in new
chr19	14028147	14031042	chr19:14028147-14031042	3	+	14028204	14030948	0	2	247,333,	0,2562,
#Partially deleted in new
chr19	14028204	14030948	chr19:14028204-14030948	1	+	14028204	14030737	789624	3	190,112,239,	0,2040,2505,
#Partially deleted in new
chr19	14030854	14031557	chr19:14030854-14031557	3	-	14030854	14030854	8553170	2	207,311,	0,392,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	14031747	14053216	chr19:14031747-14053216	3	+	14031872	14052290	789624	14	225,118,158,158,160,74,184,189,102,159,126,94,94,1121,	0,638,7760,8005,10705,10968,14406,14682,17233,17408,19010,19859,20132,20348,
#Partially deleted in new
chr19	14053364	14059159	chr19:14053364-14059159	3	-	14053604	14059159	789624	6	1862,46,85,143,81,45,	0,2015,3064,3297,3986,5750,
#Partially deleted in new
chr19	14054894	14057599	chr19:14054894-14057599	0	-	14054894	14056777	789624	5	332,46,85,143,249,	0,485,1534,1767,2456,
#Partially deleted in new
chr19	14055134	14056907	chr19:14055134-14056907	0	-	14055134	14055134	8553170	4	92,46,85,246,	0,245,1294,1527,
#Deleted in new
chr19	14070341	14071237	chr19:14070341-14071237	7	+	14070341	14070341	16724991	1	896,	0,
#Deleted in new
chr19	14072535	14075061	chr19:14072535-14075061	1	+	14072535	14074723	789624	4	65,929,74,356,	0,413,1854,2170,
#Deleted in new
chr19	14072773	14075062	chr19:14072773-14075062	3	+	14073309	14074723	789624	3	1104,74,357,	0,1616,1932,
#Deleted in new
chr19	14072875	14075062	chr19:14072875-14075062	0	+	14072875	14072875	789624	1	2187,	0,
#Deleted in new
chr19	14073360	14073479	chr19:14073360-14073479	3	+	14073360	14073360	5263520	1	119,	0,
#Deleted in new
chr19	14073581	14074978	chr19:14073581-14074978	0	+	14073581	14074723	789624	3	296,139,273,	0,743,1124,
#Partially deleted in new
chr19	14081618	14085762	chr19:14081618-14085762	3	-	14081833	14085627	789624	6	390,135,186,101,145,470,	0,850,1618,1886,2114,3674,
#Partially deleted in new
chr19	14081890	14085789	chr19:14081890-14085789	0	-	14081890	14083840	789624	6	118,135,186,101,145,66,	0,578,1346,1614,1842,3833,
#Partially deleted in new
chr19	14083532	14085875	chr19:14083532-14085875	0	-	14083532	14083532	8553170	2	73,583,	0,1760,
#Deleted in new
chr19	14087839	14090708	chr19:14087839-14090708	3	-	14088416	14090420	789624	5	736,112,97,295,924,	0,831,1040,1228,1945,
#Deleted in new
chr19	14088428	14091036	chr19:14088428-14091036	0	-	14088428	14089098	789624	5	147,112,97,295,99,	0,242,451,639,2509,
#Deleted in new
chr19	14090508	14091013	chr19:14090508-14091013	0	-	14090508	14090508	8553170	2	67,76,	0,429,
#Partially deleted in new
chr19	14091687	14117744	chr19:14091687-14117744	3	-	14093111	14117547	0	10	1550,165,123,96,127,83,99,129,62,243,	0,1940,5673,5891,6076,9138,11128,15072,15660,25814,
#Partially deleted in new
chr19	14091696	14108390	chr19:14091696-14108390	0	-	14091696	14091696	8553170	10	1541,165,123,96,127,83,99,129,62,680,	0,1931,5664,5882,6067,9129,11119,15063,15651,16014,
#Partially deleted in new
chr19	14092035	14117732	chr19:14092035-14117732	1	-	14092576	14117547	789624	3	808,62,231,	0,15312,25466,
#Partially deleted in new
chr19	14093042	14106860	chr19:14093042-14106860	0	-	14093111	14106860	789624	7	195,123,96,127,83,99,101,	0,4318,4536,4721,7783,9773,13717,
#Partially deleted in new
chr19	14093049	14114188	chr19:14093049-14114188	1	-	14093111	14114155	0	10	188,165,123,96,127,83,99,129,62,55,	0,578,4311,4529,4714,7776,9766,13710,14298,21084,
#Partially deleted in new
chr19	14093649	14101278	chr19:14093649-14101278	0	-	14093649	14093649	8553170	5	143,123,96,127,453,	0,3711,3929,4114,7176,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	14096370	14098465	chr19:14096370-14098465	0	-	14096370	14096370	8553170	1	2095,	0,
#Partially deleted in new
chr19	14096970	14112647	chr19:14096970-14112647	0	-	14096970	14096970	8553170	8	513,96,127,83,99,129,62,415,	0,608,793,3855,5845,9789,10377,15262,
#Partially deleted in new
chr19	14097247	14107404	chr19:14097247-14107404	0	-	14097545	14107404	789624	6	427,127,83,99,129,57,	0,516,3578,5568,9512,10100,
#Partially deleted in new
chr19	14102900	14118084	chr19:14102900-14118084	0	-	14102900	14106822	789624	4	14,129,62,198,	0,3859,4447,14986,
#Deleted in new
chr19	14119105	14119537	chr19:14119105-14119537	3	+	14119105	14119105	8553170	2	86,229,	0,203,
#Partially deleted in new
chr19	14119508	14136956	chr19:14119508-14136956	3	-	14120458	14136456	0	4	1157,177,116,609,	0,2023,6613,16839,
#Partially deleted in new
chr19	14120218	14136553	chr19:14120218-14136553	1	-	14120458	14136456	789624	3	447,116,206,	0,5903,16129,
#Partially deleted in new
chr19	14120447	14136613	chr19:14120447-14136613	0	-	14121656	14136456	789624	4	218,146,116,266,	0,1084,5674,15900,
#Partially deleted in new
chr19	14120497	14136589	chr19:14120497-14136589	0	-	14121670	14136456	789624	3	168,177,242,	0,1034,15850,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	14121286	14136574	chr19:14121286-14136574	1	-	14121435	14136456	789624	3	422,116,227,	0,4835,15061,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	14137178	14171264	chr19:14137178-14171264	3	+	14137178	14137178	789624	3	45,328,2488,	0,17973,31598,
#Partially deleted in new
chr19	14137187	14155801	chr19:14137187-14155801	0	+	14137187	14137187	8553170	2	36,650,	0,17964,
#Partially deleted in new
chr19	14147742	14206187	chr19:14147742-14206187	1	-	14150872	14183602	789624	24	3873,18,129,97,129,169,92,67,221,210,171,215,126,184,39,186,104,315,801,15,110,214,165,203,	0,4390,4566,4774,5041,7616,8367,8915,9182,9508,10139,10595,11347,11658,11992,12369,12850,13569,14863,19273,22939,29788,35790,58242,
#Partially deleted in new
chr19	14149952	14206169	chr19:14149952-14206169	3	-	14150872	14183602	789624	23	1663,18,129,97,129,169,92,67,221,210,171,215,126,184,39,186,104,315,801,110,214,165,185,	0,2180,2356,2564,2831,5406,6157,6705,6972,7298,7929,8385,9137,9448,9782,10159,10640,11359,12653,20729,27578,33580,56032,
#Deleted in new
chr19	14151168	14152839	chr19:14151168-14152839	0	-	14151168	14152839	789624	4	447,129,97,56,	0,1140,1348,1615,
#Deleted in new
chr19	14151207	14152850	chr19:14151207-14152850	0	-	14151207	14152850	789624	5	408,90,129,97,67,	0,925,1101,1309,1576,
#Deleted in new
chr19	14159174	14161536	chr19:14159174-14161536	0	-	14159174	14161536	789624	5	41,184,39,186,225,	0,226,560,937,2137,
#Deleted in new
chr19	14159488	14160580	chr19:14159488-14160580	0	-	14159488	14159488	8553170	3	96,39,469,	0,246,623,
#Deleted in new
chr19	14162947	14170734	chr19:14162947-14170734	0	-	14162947	14162947	8553170	4	459,85,15,53,	0,1673,4068,7734,
#Partially deleted in new
chr19	14170487	14177650	chr19:14170487-14177650	0	-	14170487	14170487	8553170	2	304,120,	0,7043,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	14213051	14213323	chr19:14213051-14213323	3	+	14213051	14213051	8553170	1	272,	0,
#Partially deleted in new
chr19	14254188	14293205	chr19:14254188-14293205	3	-	14254188	14254188	8553170	5	243,92,90,164,38,	0,25615,37438,38565,38979,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	14267806	14269377	chr19:14267806-14269377	3	-	14267806	14267806	8553170	2	107,57,	0,1514,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	14305457	14363990	chr19:14305457-14363990	3	-	14305457	14305457	789624	4	218,112,124,119,	0,14782,19850,58414,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	14325351	14370196	chr19:14325351-14370196	1	-	14325351	14325351	8553170	4	80,95,94,254,	0,21963,41515,44591,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	14333742	14343916	chr19:14333742-14343916	3	+	14333742	14333742	789624	2	277,491,	0,9683,
#Partially deleted in new
chr19	14380500	14397804	chr19:14380500-14397804	0	+	14380500	14380500	8553170	5	116,51,117,156,147,	0,7949,8201,10423,17157,
#Partially deleted in new
chr19	14381155	14408275	chr19:14381155-14408275	1	+	14381523	14408121	0	18	390,51,117,156,147,47,78,178,108,266,180,192,227,67,92,169,102,184,	0,7294,7546,9768,16502,16733,16906,20230,20497,21441,23227,24592,25175,25544,25713,25905,26752,26936,
#Partially deleted in new
chr19	14381364	14397370	chr19:14381364-14397370	0	+	14381364	14381364	8553170	6	181,51,117,156,132,294,	0,7085,7337,9559,14977,15712,
#Partially deleted in new
chr19	14381415	14397916	chr19:14381415-14397916	0	+	14381523	14397916	789624	5	130,117,156,147,28,	0,7286,9508,16242,16473,
#Partially deleted in new
chr19	14381415	14391197	chr19:14381415-14391197	0	+	14381523	14391197	789624	4	130,51,117,274,	0,7034,7286,9508,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	14381417	14391492	chr19:14381417-14391492	0	+	14381417	14381417	8553170	5	128,51,117,156,102,	0,7032,7284,9506,9973,
#Partially deleted in new
chr19	14381434	14408725	chr19:14381434-14408725	1	+	14381523	14408121	0	19	111,51,117,156,132,147,47,78,178,108,266,180,192,227,67,92,169,102,634,	0,7015,7267,9489,14907,16223,16454,16627,19951,20218,21162,22948,24313,24896,25265,25434,25626,26473,26657,
#Partially deleted in new
chr19	14381443	14408721	chr19:14381443-14408721	3	+	14381523	14408121	0	20	102,51,117,156,132,147,147,47,78,178,108,266,180,192,227,67,92,169,102,630,	0,7006,7258,9480,14898,15633,16214,16445,16618,19942,20209,21153,22939,24304,24887,25256,25425,25617,26464,26648,
#Partially deleted in new
chr19	14381443	14397223	chr19:14381443-14397223	0	+	14381523	14397223	789624	5	102,51,117,156,147,	0,7006,7258,9480,15633,
#Deleted in new
chr19	14396249	14397911	chr19:14396249-14397911	0	+	14396249	14396249	8553170	4	224,147,147,23,	0,827,1408,1639,
#Deleted in new
chr19	14397413	14397980	chr19:14397413-14397980	0	+	14397413	14397413	8553170	2	391,92,	0,475,
#Partially deleted in new
chr19	14397479	14401503	chr19:14397479-14401503	0	+	14397479	14397479	8553170	4	325,47,78,118,	0,409,582,3906,
#Deleted in new
chr19	14397732	14398276	chr19:14397732-14398276	0	+	14397732	14397732	8553170	2	72,215,	0,329,
#Deleted in new
chr19	14397732	14398268	chr19:14397732-14398268	0	+	14397732	14397732	8553170	2	203,207,	0,329,
#Deleted in new
chr19	14397732	14398335	chr19:14397732-14398335	0	+	14397732	14397732	8553170	3	72,47,274,	0,156,329,
#Partially deleted in new
chr19	14402716	14408723	chr19:14402716-14408723	3	-	14402716	14402716	8553170	2	138,114,	0,5893,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	14404369	14405605	chr19:14404369-14405605	0	+	14404369	14404369	8553170	2	711,227,	0,1009,
#Partially deleted in new
chr19	14408818	14419329	chr19:14408818-14419329	0	-	14409342	14413220	789624	10	134,148,145,132,119,184,93,128,212,60,	0,218,484,923,1397,2170,2687,3732,4194,10451,
#Partially deleted in new
chr19	14408818	14410929	chr19:14408818-14410929	0	-	14408818	14408818	8553170	4	134,148,343,1188,	0,218,484,923,
#Partially deleted in new
chr19	14408818	14419337	chr19:14408818-14419337	0	-	14408818	14408818	8553170	9	134,148,343,593,184,93,128,212,68,	0,218,484,923,2170,2687,3732,4194,10451,
#Partially deleted in new
chr19	14408849	14413220	chr19:14408849-14413220	0	-	14409909	14413220	789624	10	103,148,145,110,240,119,184,93,128,208,	0,187,453,686,892,1366,2139,2656,3701,4163,
#Partially deleted in new
chr19	14408850	14419367	chr19:14408850-14419367	3	-	14408935	14413220	789624	11	102,148,145,110,132,119,184,93,128,212,98,	0,186,452,685,891,1365,2138,2655,3700,4162,10419,
#Partially deleted in new
chr19	14409535	14411598	chr19:14409535-14411598	0	-	14410591	14411598	789624	6	110,132,119,185,184,93,	0,206,680,885,1453,1970,
#Partially deleted in new
chr19	14409538	14411516	chr19:14409538-14411516	0	-	14409538	14409538	8553170	5	107,593,185,184,11,	0,203,882,1450,1967,
#Partially deleted in new
chr19	14409772	14419329	chr19:14409772-14419329	0	-	14409772	14409772	8553170	7	562,58,184,93,128,212,60,	0,775,1216,1733,2778,3240,9497,
#Partially deleted in new
chr19	14409909	14419383	chr19:14409909-14419383	1	-	14409909	14413220	789624	7	72,119,184,93,128,212,114,	0,306,1079,1596,2641,3103,9360,
#Partially deleted in new
chr19	14410215	14419329	chr19:14410215-14419329	0	-	14410215	14413220	789624	6	119,184,93,161,212,60,	0,773,1290,2335,2797,9054,
#Partially deleted in new
chr19	14410260	14411386	chr19:14410260-14411386	0	-	14410260	14410260	8553170	3	74,185,398,	0,160,728,
#Partially deleted in new
chr19	14410307	14413182	chr19:14410307-14413182	0	-	14410307	14413182	789624	5	27,148,93,128,170,	0,681,1198,2243,2705,
#Partially deleted in new
chr19	14410646	14411554	chr19:14410646-14411554	0	-	14410646	14410646	8553170	2	526,49,	0,859,
#Partially deleted in new
chr19	14411061	14419380	chr19:14411061-14419380	0	-	14411061	14411061	8553170	4	537,128,212,111,	0,1489,1951,8208,
#Partially deleted in new
chr19	14411217	14419341	chr19:14411217-14419341	0	-	14411217	14411217	8553170	3	381,674,72,	0,1333,8052,
#Partially deleted in new
chr19	14411542	14419062	chr19:14411542-14419062	0	-	14411542	14413220	789624	5	56,128,212,35,134,	0,1008,1470,2437,7386,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	14412358	14419323	chr19:14412358-14419323	0	-	14412358	14412358	8553170	3	320,212,54,	0,654,6911,
#Partially deleted in new
chr19	14412560	14419341	chr19:14412560-14419341	0	-	14412560	14412560	8553170	3	254,212,72,	0,452,6709,
#Partially deleted in new
chr19	14412561	14419083	chr19:14412561-14419083	0	-	14412561	14413220	789624	3	117,212,155,	0,451,6367,
#Partially deleted in new
chr19	14412609	14419073	chr19:14412609-14419073	0	-	14412609	14413220	789624	4	69,212,137,145,	0,403,3659,6319,
#Partially deleted in new
chr19	14433052	14446436	chr19:14433052-14446436	0	+	14443588	14446436	789624	4	118,301,152,11,	0,8090,10417,13373,
#Partially deleted in new
chr19	14433322	14471867	chr19:14433322-14471867	0	+	14433322	14433322	8553170	19	220,301,152,136,146,214,195,110,144,76,142,94,229,92,648,143,108,81,287,	0,7820,10147,13103,16995,17573,18506,24708,24909,30344,30505,30737,34242,34553,36018,36840,37252,37448,38258,
#Partially deleted in new
chr19	14433356	14471859	chr19:14433356-14471859	1	+	14433521	14471784	0	22	186,301,152,136,146,214,195,110,144,76,142,94,77,76,92,177,63,77,143,108,81,279,	0,7786,10113,13069,16961,17539,18472,24674,24875,30310,30471,30703,34208,34361,34519,35984,36395,36555,36806,37218,37414,38224,
#Partially deleted in new
chr19	14433418	14458242	chr19:14433418-14458242	0	+	14434597	14458242	789624	7	124,65,301,152,136,110,11,	0,1171,7724,10051,13007,24612,24813,
#Partially deleted in new
chr19	14433483	14446458	chr19:14433483-14446458	0	+	14433483	14433483	8553170	4	59,301,152,50,	0,7659,9986,12925,
#Partially deleted in new
chr19	14433492	14450461	chr19:14433492-14450461	0	+	14434597	14450461	789624	6	50,65,301,152,136,144,	0,1097,7650,9977,12933,16825,
#Partially deleted in new
chr19	14440259	14471866	chr19:14440259-14471866	3	+	14440290	14471784	0	22	70,301,152,136,146,214,195,110,144,76,142,94,77,76,92,177,63,77,143,108,81,286,	0,883,3210,6166,10058,10636,11569,17771,17972,23407,23568,23800,27305,27458,27616,29081,29492,29652,29903,30315,30511,31321,
#Deleted in new
chr19	14440372	14441434	chr19:14440372-14441434	0	+	14440372	14440372	8553170	2	30,292,	0,770,
#Partially deleted in new
chr19	14450805	14458079	chr19:14450805-14458079	0	+	14450805	14450805	8553170	3	304,195,49,	0,1023,7225,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	14458400	14459366	chr19:14458400-14459366	3	+	14458400	14458400	8553170	2	528,361,	0,605,
#Partially deleted in new
chr19	14463542	14467678	chr19:14463542-14467678	0	+	14463542	14463542	8553170	4	200,142,94,114,	0,285,517,4022,
#Partially deleted in new
chr19	14463874	14471859	chr19:14463874-14471859	0	+	14463874	14471784	789624	4	95,94,77,263,	0,185,3690,7722,
#Partially deleted in new
chr19	14467485	14467924	chr19:14467485-14467924	0	+	14467485	14467485	8553170	2	156,207,	0,232,
#Partially deleted in new
chr19	14467621	14471764	chr19:14467621-14471764	0	+	14467621	14470677	789624	10	20,76,92,177,63,77,46,51,81,184,	0,96,254,1719,2130,2290,2541,3010,3149,3959,
#Partially deleted in new
chr19	14470174	14471858	chr19:14470174-14471858	0	+	14470174	14470174	8553170	3	131,277,278,	0,400,1406,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	14470781	14471862	chr19:14470781-14471862	0	+	14470781	14471862	789624	3	70,325,282,	0,320,799,
#Partially deleted in new
chr19	14472465	14475362	chr19:14472465-14475362	3	-	14472559	14474320	789624	3	361,959,101,	0,913,2796,
#Partially deleted in new
chr19	14477759	14496149	chr19:14477759-14496149	1	-	14478415	14480775	789624	6	808,82,113,181,186,113,	0,924,1652,2545,2833,18277,
#Partially deleted in new
chr19	14477761	14496132	chr19:14477761-14496132	1	-	14478415	14482976	789624	7	806,82,113,181,186,318,96,	0,922,1650,2543,2831,4927,18275,
#Partially deleted in new
chr19	14477761	14496132	chr19:14477761-14496132	3	-	14478415	14482976	789624	9	806,82,113,181,186,318,88,56,96,	0,922,1650,2543,2831,4927,13894,15095,18275,
#Partially deleted in new
chr19	14477763	14480596	chr19:14477763-14480596	0	-	14477763	14477763	8553170	3	804,82,1185,	0,920,1648,
#Partially deleted in new
chr19	14478003	14479857	chr19:14478003-14479857	0	-	14478415	14479857	789624	4	564,82,113,40,	0,680,1408,1814,
#Partially deleted in new
chr19	14478245	14496132	chr19:14478245-14496132	1	-	14478415	14482976	789624	8	322,82,113,181,186,318,88,96,	0,438,1166,2059,2347,4443,13410,17791,
#Partially deleted in new
chr19	14478245	14496132	chr19:14478245-14496132	1	-	14478415	14480775	789624	7	322,82,113,181,186,88,96,	0,438,1166,2059,2347,13410,17791,
#Partially deleted in new
chr19	14478255	14496052	chr19:14478255-14496052	0	-	14479518	14480775	789624	7	312,82,113,186,88,56,16,	0,428,1156,2337,13400,14601,17781,
#Partially deleted in new
chr19	14479411	14496132	chr19:14479411-14496132	0	-	14479411	14480775	789624	4	113,181,186,96,	0,893,1181,16625,
#Partially deleted in new
chr19	14480305	14480896	chr19:14480305-14480896	0	-	14480305	14480775	789624	2	180,304,	0,287,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	14481746	14483463	chr19:14481746-14483463	0	-	14481746	14481746	8553170	1	1717,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	14482855	14491743	chr19:14482855-14491743	0	-	14482855	14482976	789624	3	151,91,88,	0,633,8800,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	14482856	14483445	chr19:14482856-14483445	0	-	14482856	14482976	789624	2	150,115,	0,474,
#Partially deleted in new
chr19	14489387	14489609	chr19:14489387-14489609	7	+	14489387	14489387	16724991	1	222,	0,
#Partially deleted in new
chr19	14514769	14518420	chr19:14514769-14518420	3	-	14515939	14518349	0	3	1401,581,282,	0,1696,3369,
#Partially deleted in new
chr19	14515648	14529308	chr19:14515648-14529308	1	-	14515939	14516957	0	4	522,581,85,99,	0,817,12077,13561,
#Partially deleted in new
chr19	14516112	14517833	chr19:14516112-14517833	0	-	14516112	14516957	789624	3	58,581,243,	0,353,1478,
#Partially deleted in new
chr19	14516568	14517569	chr19:14516568-14517569	0	-	14516568	14517488	789624	2	478,91,	0,910,
#Partially deleted in new
chr19	14516607	14529193	chr19:14516607-14529193	0	-	14516607	14516957	789624	3	439,85,69,	0,11118,12517,
#Partially deleted in new
chr19	14516609	14529300	chr19:14516609-14529300	0	-	14516609	14516957	789624	3	437,85,79,	0,11116,12612,
#Partially deleted in new
chr19	14516635	14529770	chr19:14516635-14529770	0	-	14516635	14516957	789624	3	411,124,460,	0,11051,12675,
#Partially deleted in new
chr19	14516684	14529308	chr19:14516684-14529308	0	-	14516684	14516957	789624	3	362,124,87,	0,11002,12537,
#Partially deleted in new
chr19	14516716	14529322	chr19:14516716-14529322	0	-	14516716	14516957	789624	3	330,124,113,	0,10970,12493,
#Partially deleted in new
chr19	14516718	14529251	chr19:14516718-14529251	0	-	14516718	14516957	789624	4	328,130,85,30,	0,1420,11007,12503,
#Partially deleted in new
chr19	14517084	14563738	chr19:14517084-14563738	0	+	14517084	14517084	8553170	4	300,51,52,81,	0,45440,46121,46573,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	14527366	14529253	chr19:14527366-14529253	0	-	14527366	14527366	8553170	2	444,44,	0,1843,
#Deleted in new
chr19	14529542	14529640	chr19:14529542-14529640	3	+	14529542	14529542	5263520	1	98,	0,
#Partially deleted in new
chr19	14529559	14565978	chr19:14529559-14565978	3	+	14529696	14565871	0	13	152,51,52,45,104,116,106,73,44,58,89,46,235,	0,32965,33646,34098,34240,34422,34622,35226,35389,35506,35642,36058,36184,
#Partially deleted in new
chr19	14529578	14564992	chr19:14529578-14564992	0	+	14529578	14529578	8553170	11	133,114,30,51,52,45,104,116,106,73,44,	0,4354,7086,32946,33627,34079,34221,34403,34603,35207,35370,
#Partially deleted in new
chr19	14529591	14565977	chr19:14529591-14565977	0	+	14529591	14529591	789624	13	120,51,84,45,104,116,106,73,44,58,89,46,234,	0,32933,33582,34066,34208,34390,34590,35194,35357,35474,35610,36026,36152,
#Partially deleted in new
chr19	14529593	14565980	chr19:14529593-14565980	0	+	14529593	14529593	789624	13	118,51,117,45,104,116,106,73,44,58,89,46,237,	0,32931,33547,34064,34206,34388,34588,35192,35355,35472,35608,36024,36150,
#Partially deleted in new
chr19	14529594	14565977	chr19:14529594-14565977	0	+	14529696	14563252	789624	14	117,67,51,52,45,104,116,106,73,44,58,89,46,234,	0,15519,32930,33611,34063,34205,34387,34587,35191,35354,35471,35607,36023,36149,
#Partially deleted in new
chr19	14529597	14563526	chr19:14529597-14563526	0	+	14529597	14529597	8553170	3	114,51,386,	0,32927,33543,
#Partially deleted in new
chr19	14529609	14565258	chr19:14529609-14565258	0	+	14529609	14529609	8553170	8	102,51,52,45,104,306,73,310,	0,32915,33596,34048,34190,34372,35176,35339,
#Partially deleted in new
chr19	14529629	14564119	chr19:14529629-14564119	0	+	14529629	14529629	8553170	5	82,51,52,246,138,	0,32895,33576,34028,34352,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	14529629	14532528	chr19:14529629-14532528	0	+	14529629	14529629	8553170	1	2899,	0,
#Partially deleted in new
chr19	14529635	14565660	chr19:14529635-14565660	0	+	14529696	14564067	789624	12	76,51,52,45,69,116,106,73,44,58,89,43,	0,32889,33570,34022,34199,34346,34546,35150,35313,35430,35566,35982,
#Partially deleted in new
chr19	14529640	14565283	chr19:14529640-14565283	0	+	14529640	14529640	8553170	8	71,51,52,45,104,116,106,498,	0,32884,33565,34017,34159,34341,34541,35145,
#Partially deleted in new
chr19	14529656	14565978	chr19:14529656-14565978	0	+	14529656	14529656	8553170	12	55,51,52,45,104,116,106,207,58,89,46,235,	0,32868,33549,34001,34143,34325,34525,35129,35409,35545,35961,36087,
#Partially deleted in new
chr19	14529696	14563884	chr19:14529696-14563884	0	+	14529696	14529696	8553170	5	15,51,84,45,50,	0,32828,33477,33961,34138,
#Partially deleted in new
chr19	14545723	14564073	chr19:14545723-14564073	0	+	14545723	14545723	8553170	6	165,51,84,45,104,92,	0,16801,17450,17934,18076,18258,
#Partially deleted in new
chr19	14545758	14563814	chr19:14545758-14563814	0	+	14545758	14545758	8553170	5	130,51,52,45,36,	0,16766,17447,17899,18020,
#Deleted in new
chr19	14561966	14564981	chr19:14561966-14564981	0	+	14561966	14561966	8553170	9	155,51,52,45,104,116,106,73,33,	0,558,1239,1691,1833,2015,2215,2819,2982,
#Deleted in new
chr19	14562051	14565040	chr19:14562051-14565040	0	+	14562051	14562051	8553170	8	70,51,52,45,133,116,106,255,	0,473,1154,1606,1719,1930,2130,2734,
#Deleted in new
chr19	14562355	14565978	chr19:14562355-14565978	1	+	14562395	14565871	789624	12	220,52,45,104,116,106,73,44,58,89,46,235,	0,850,1302,1444,1626,1826,2430,2593,2710,2846,3262,3388,
#Deleted in new
chr19	14564057	14565971	chr19:14564057-14565971	0	+	14564057	14564057	8553170	6	230,73,44,225,46,228,	0,728,891,1008,1560,1686,
#Deleted in new
chr19	14564228	14565977	chr19:14564228-14565977	0	+	14564228	14565871	789624	6	59,73,58,89,46,234,	0,557,837,973,1389,1515,
#Deleted in new
chr19	14564251	14565921	chr19:14564251-14565921	0	+	14564251	14564251	8553170	5	36,338,89,46,178,	0,534,950,1366,1492,
#Deleted in new
chr19	14564693	14565925	chr19:14564693-14565925	0	+	14564693	14564693	8553170	6	165,44,58,89,46,182,	0,255,372,508,924,1050,
#Deleted in new
chr19	14564697	14565975	chr19:14564697-14565975	0	+	14564697	14564697	8553170	5	295,58,89,46,232,	0,368,504,920,1046,
#Deleted in new
chr19	14564941	14565980	chr19:14564941-14565980	0	+	14564941	14564941	8553170	3	182,89,237,	0,260,802,
#Deleted in new
chr19	14564960	14565961	chr19:14564960-14565961	0	+	14564960	14564960	8553170	3	32,225,344,	0,105,657,
#Partially deleted in new
chr19	14566077	14572062	chr19:14566077-14572062	3	-	14566132	14572000	0	3	188,169,174,	0,687,5811,
#Partially deleted in new
chr19	14566077	14572062	chr19:14566077-14572062	0	-	14566830	14572000	789624	3	188,167,174,	0,687,5811,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	14583083	14611157	chr19:14583083-14611157	1	+	14583160	14610090	789624	13	120,78,78,78,33,51,42,42,138,63,96,152,1094,	0,273,4530,9197,11433,11548,11675,12190,13792,14015,16633,16947,26980,
#Partially deleted in new
chr19	14583122	14610420	chr19:14583122-14610420	0	+	14583160	14607048	789624	13	81,78,78,78,33,51,42,42,138,63,96,110,357,	0,234,4491,9158,11394,11509,11636,12151,13753,13976,16594,23870,26941,
#Partially deleted in new
chr19	14583122	14610420	chr19:14583122-14610420	3	+	14583160	14610196	789624	14	81,78,78,78,33,51,42,42,138,63,96,152,110,357,	0,234,4491,9158,11394,11509,11636,12151,13753,13976,16594,16908,23870,26941,
#Partially deleted in new
chr19	14583122	14610420	chr19:14583122-14610420	0	+	14583160	14599691	789624	14	81,78,78,78,33,51,42,42,138,63,159,152,110,357,	0,234,4491,9158,11394,11509,11636,12151,13753,13976,16531,16908,23870,26941,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	14584094	14584395	chr19:14584094-14584395	3	+	14584094	14584094	8553170	1	301,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	14588356	14588656	chr19:14588356-14588656	3	+	14588356	14588356	8553170	1	300,	0,
#Partially deleted in new
chr19	14619116	14674918	chr19:14619116-14674918	1	-	14619432	14674770	789624	15	355,108,169,92,67,236,198,168,185,120,184,38,123,51,173,	0,6375,10922,13804,14119,18988,22302,24991,28064,31968,35865,39396,44301,49685,55629,
#Partially deleted in new
chr19	14619116	14674844	chr19:14619116-14674844	1	-	14619432	14674770	789624	13	355,108,169,92,67,236,198,168,185,120,123,51,99,	0,6375,10922,13804,14119,18988,22302,24991,28064,31968,44301,49685,55629,
#Partially deleted in new
chr19	14619235	14690027	chr19:14619235-14690027	1	-	14619432	14651136	789624	15	236,108,169,92,67,236,198,168,185,120,71,156,123,51,119,	0,6256,10803,13685,14000,18869,22183,24872,27945,31849,39244,42727,44182,49566,70673,
#Partially deleted in new
chr19	14619238	14674871	chr19:14619238-14674871	3	-	14619432	14674770	789624	16	233,108,169,92,67,236,198,168,185,120,184,38,156,123,51,126,	0,6253,10800,13682,13997,18866,22180,24869,27942,31846,35743,39274,42724,44179,49563,55507,
#Deleted in new
chr19	14621633	14622242	chr19:14621633-14622242	7	-	14621633	14621633	16724991	1	609,	0,
#Deleted in new
chr19	14628598	14628801	chr19:14628598-14628801	7	+	14628598	14628598	16724991	1	203,	0,
#Partially deleted in new
chr19	14668619	14674998	chr19:14668619-14674998	1	-	14668703	14674770	789624	2	233,253,	0,6126,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	14689800	14707262	chr19:14689800-14707262	0	+	14689800	14689800	8553170	7	120,44,124,96,83,117,1172,	0,3650,5209,5765,9398,15253,16290,
#Partially deleted in new
chr19	14690048	14716183	chr19:14690048-14716183	0	+	14693491	14701598	789624	10	102,44,124,96,83,314,117,88,89,72,	0,3402,4961,5517,9150,11535,15005,16637,25333,26063,
#Partially deleted in new
chr19	14690054	14699411	chr19:14690054-14699411	0	+	14690054	14690054	8553170	5	96,44,124,96,213,	0,3396,4955,5511,9144,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	14690068	14733746	chr19:14690068-14733746	1	+	14693491	14731186	789624	12	82,44,124,96,83,117,88,89,127,96,77,2572,	0,3382,4941,5497,9130,14985,16617,25313,26043,26925,27588,41106,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	14690073	14709220	chr19:14690073-14709220	1	+	14693491	14708447	789624	7	77,44,124,117,88,49,893,	0,3377,4936,14980,16612,17843,18254,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	14690098	14700355	chr19:14690098-14700355	0	+	14690098	14690098	8553170	6	52,44,124,96,83,150,	0,3352,4911,5467,9100,10107,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	14690100	14721908	chr19:14690100-14721908	3	+	14693491	14719325	789624	12	50,44,124,96,83,117,88,89,127,96,77,3681,	0,3350,4909,5465,9098,14953,16585,25281,26011,26893,27556,28127,
#Partially deleted in new
chr19	14690105	14718243	chr19:14690105-14718243	0	+	14690105	14690105	8553170	11	45,44,124,96,83,117,88,89,127,740,16,	0,3345,4904,5460,9093,14948,16580,25276,26006,26888,28122,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	14693450	14720793	chr19:14693450-14720793	0	+	14693491	14714814	789624	11	44,124,96,83,117,88,733,127,96,77,2566,	0,1559,2115,5748,11603,13235,21287,22661,23543,24206,24777,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	14707993	14709250	chr19:14707993-14709250	0	+	14707993	14707993	8553170	1	1257,	0,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr19	14732392	14778537	chr19:14732392-14778537	3	-	14736235	14776756	0	21	3852,111,169,92,67,236,198,174,224,108,178,78,47,147,147,132,156,117,51,202,281,	0,11027,11223,13839,14503,19043,19936,22561,23261,23845,32040,32927,33131,33265,33842,34585,39949,41545,41863,44333,45864,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr19	14735575	14778541	chr19:14735575-14778541	0	-	14735575	14735575	8553170	16	669,111,169,67,236,108,178,78,47,724,132,156,117,51,202,285,	0,7844,8040,11320,15860,20662,28857,29744,29948,30082,31402,36766,38362,38680,41150,42681,
#Partially deleted in new
chr19	14736078	14776756	chr19:14736078-14776756	1	-	14736235	14776756	0	20	166,111,169,92,67,236,198,174,191,108,178,78,47,147,147,132,156,117,51,31,	0,7341,7537,10153,10817,15357,16250,18875,19575,20159,28354,29241,29445,29579,30156,30899,36263,37859,38177,40647,
#Partially deleted in new
chr19	14736106	14776842	chr19:14736106-14776842	1	-	14736235	14776756	0	19	138,111,169,92,67,236,198,224,108,178,78,47,147,147,132,156,117,51,117,	0,7313,7509,10125,10789,15329,16222,19547,20131,28326,29213,29417,29551,30128,30871,36235,37831,38149,40619,
#Partially deleted in new
chr19	14736235	14776756	chr19:14736235-14776756	1	-	14736235	14776756	0	18	9,111,169,92,67,236,198,174,224,108,178,78,47,147,156,117,51,31,	0,7184,7380,9996,10660,15200,16093,18718,19418,20002,28197,29084,29288,29422,36106,37702,38020,40490,
#Partially deleted in new
chr19	14736235	14776756	chr19:14736235-14776756	1	-	14736235	14776756	0	19	9,111,169,92,67,236,198,174,224,108,178,78,47,147,132,156,117,51,31,	0,7184,7380,9996,10660,15200,16093,18718,19418,20002,28197,29084,29288,29422,30742,36106,37702,38020,40490,
#Partially deleted in new
chr19	14736235	14776756	chr19:14736235-14776756	1	-	14736235	14776756	0	17	9,111,169,92,67,236,198,174,224,108,178,78,47,156,117,51,31,	0,7184,7380,9996,10660,15200,16093,18718,19418,20002,28197,29084,29288,36106,37702,38020,40490,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr19	14741474	14776842	chr19:14741474-14776842	1	-	14742020	14776756	789624	20	612,111,169,92,67,236,198,174,191,108,178,78,47,147,147,132,156,117,51,117,	0,1945,2141,4757,5421,9961,10854,13479,14179,14763,22958,23845,24049,24183,24760,25503,30867,32463,32781,35251,
#Partially deleted in new
chr19	14743763	14772374	chr19:14743763-14772374	0	-	14752431	14772374	789624	13	21,92,67,236,198,174,108,178,78,47,147,132,33,	0,2468,3132,7672,8565,11190,12474,20669,21556,21760,21894,23214,28578,
#Partially deleted in new
chr19	14751502	14776841	chr19:14751502-14776841	0	-	14752431	14776756	789624	12	169,198,108,178,78,47,147,132,156,117,51,116,	0,826,4735,12930,13817,14021,14155,15475,20839,22435,22753,25223,
#Partially deleted in new
chr19	14767085	14776606	chr19:14767085-14776606	0	-	14767085	14767085	8553170	5	24,156,117,51,203,	0,5256,6852,7170,9318,
#Partially deleted in new
chr19	14768790	14776841	chr19:14768790-14776841	0	-	14768790	14768790	8553170	5	144,156,117,51,116,	0,3551,5147,5465,7935,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	14771879	14776826	chr19:14771879-14776826	0	-	14771879	14771879	8553170	4	618,117,51,101,	0,2058,2376,4846,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	14789259	14835376	chr19:14789259-14835376	0	-	14789259	14789259	8553170	3	3333,188,303,	0,20546,45814,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	14789259	14835285	chr19:14789259-14835285	1	-	14799173	14800136	789624	5	10890,189,232,188,212,	0,10996,11273,20546,45814,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	14789259	14835285	chr19:14789259-14835285	1	-	14799173	14800136	789624	3	10890,188,212,	0,20546,45814,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	14789259	14835285	chr19:14789259-14835285	3	-	14799173	14800136	789624	6	10890,189,232,188,67,212,	0,10996,11273,20546,32159,45814,
#Partially deleted in new
chr19	14792317	14792533	chr19:14792317-14792533	7	+	14792317	14792317	16724991	1	216,	0,
#Deleted in new
chr19	14799145	14800211	chr19:14799145-14800211	1	-	14799173	14800136	789624	1	1066,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	14824250	14835285	chr19:14824250-14835285	3	-	14827281	14828241	789624	2	4004,212,	0,10823,
#Deleted in new
chr19	14827270	14828299	chr19:14827270-14828299	1	-	14827281	14828241	789624	1	1029,	0,
#Partially deleted in new
chr19	14840465	14848922	chr19:14840465-14848922	3	-	14840947	14841877	789624	2	1424,423,	0,8034,
#Deleted in new
chr19	14840947	14841877	chr19:14840947-14841877	1	-	14840947	14841877	789624	1	930,	0,
#Deleted in new
chr19	14852031	14852944	chr19:14852031-14852944	7	-	14852031	14852031	16724991	1	913,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	14863713	14867358	chr19:14863713-14867358	7	-	14863713	14863713	16724991	2	1015,204,	0,3441,
#Deleted in new
chr19	14863785	14864715	chr19:14863785-14864715	5	-	14863785	14863785	16724991	1	930,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	14878202	14886132	chr19:14878202-14886132	3	-	14880425	14881355	789624	3	3349,98,192,	0,3571,7738,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	14878202	14884761	chr19:14878202-14884761	1	-	14880425	14881355	789624	3	3349,98,118,	0,3571,6441,
#Deleted in new
chr19	14880325	14881452	chr19:14880325-14881452	1	-	14880425	14881355	789624	1	1127,	0,
#Deleted in new
chr19	14886838	14887115	chr19:14886838-14887115	7	-	14886838	14886838	16724991	1	277,	0,
#Partially deleted in new
chr19	14891736	14897845	chr19:14891736-14897845	7	-	14891736	14891736	16724991	2	1081,77,	0,6032,
#Deleted in new
chr19	14891834	14892804	chr19:14891834-14892804	5	-	14891834	14891834	16724991	1	970,	0,
#Deleted in new
chr19	14903231	14904138	chr19:14903231-14904138	7	-	14903231	14903231	16724991	1	907,	0,
#Deleted in new
chr19	14916427	14917380	chr19:14916427-14917380	7	+	14916427	14916427	16724991	1	953,	0,
#Deleted in new
chr19	14927051	14928060	chr19:14927051-14928060	7	+	14927051	14927051	16724991	1	1009,	0,
#Deleted in new
chr19	14941488	14942448	chr19:14941488-14942448	3	+	14941488	14942448	789624	1	960,	0,
#Partially deleted in new
chr19	14950033	15010620	chr19:14950033-15010620	1	-	14950194	15010490	789624	9	357,135,195,234,344,43,138,212,136,	0,2894,4101,6442,11968,14285,21703,22672,60451,
#Partially deleted in new
chr19	14950178	14972918	chr19:14950178-14972918	3	-	14950194	14972910	789624	9	212,135,195,234,344,43,205,138,213,	0,2749,3956,6297,11823,14140,18124,21558,22527,
#Partially deleted in new
chr19	14950194	14977027	chr19:14950194-14977027	1	-	14950194	14972910	789624	9	196,135,195,344,43,205,138,212,267,	0,2733,3940,11807,14124,18108,21542,22511,26566,
#Partially deleted in new
chr19	14961309	14980298	chr19:14961309-14980298	1	-	14961997	14972910	789624	6	1036,43,205,138,212,786,	0,3009,6993,10427,11396,18203,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	14961309	14979693	chr19:14961309-14979693	1	-	14961997	14972910	789624	8	1036,43,205,138,212,1017,155,181,	0,3009,6993,10427,11396,15451,16810,18203,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	14964008	14975273	chr19:14964008-14975273	0	-	14964008	14964008	8553170	4	353,205,138,2568,	0,4294,7728,8697,
#Partially deleted in new
chr19	14968368	14979722	chr19:14968368-14979722	0	-	14968368	14972910	789624	4	139,138,208,210,	0,3368,4337,11144,
#Partially deleted in new
chr19	14968424	15010643	chr19:14968424-15010643	0	-	14968424	15010490	789624	4	83,138,212,159,	0,3312,4281,42060,
#Partially deleted in new
chr19	14971749	15022990	chr19:14971749-15022990	0	-	14971749	14972910	789624	3	125,212,87,	0,956,51154,
#Partially deleted in new
chr19	14972804	14979688	chr19:14972804-14979688	0	-	14972804	14972910	789624	2	113,380,	0,6504,
#Partially deleted in new
chr19	15010743	15023269	chr19:15010743-15023269	3	+	15010825	15023119	789624	7	652,105,199,167,96,114,399,	0,2928,9717,10609,10872,11062,12127,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	15049383	15058293	chr19:15049383-15058293	3	+	15052251	15056089	789624	7	262,73,150,226,117,104,2309,	0,2822,4098,4349,5774,6046,6601,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	15054901	15056278	chr19:15054901-15056278	0	+	15054901	15054901	8553170	3	373,104,294,	0,528,1083,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	15082210	15092970	chr19:15082210-15092970	3	+	15087065	15088133	789624	2	66,5918,	0,4842,
#Deleted in new
chr19	15086979	15088221	chr19:15086979-15088221	1	+	15087065	15088133	789624	1	1242,	0,
#Partially deleted in new
chr19	15107402	15114988	chr19:15107402-15114988	3	+	15107433	15113963	789624	8	119,342,645,215,127,161,226,1429,	0,1653,2301,3118,3910,4229,4943,6157,
#Partially deleted in new
chr19	15107404	15109477	chr19:15107404-15109477	0	+	15107433	15109477	789624	2	117,422,	0,1651,
#Partially deleted in new
chr19	15107404	15114985	chr19:15107404-15114985	1	+	15107433	15113963	789624	8	117,141,645,215,127,161,226,1426,	0,1852,2299,3116,3908,4227,4941,6155,
#Partially deleted in new
chr19	15108832	15114974	chr19:15108832-15114974	1	+	15110474	15113963	789624	5	1903,127,161,226,1415,	0,2480,2799,3513,4727,
#Partially deleted in new
chr19	15110580	15113622	chr19:15110580-15113622	0	+	15110580	15113622	789624	4	155,127,226,63,	0,732,1765,2979,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	15114983	15124034	chr19:15114983-15124034	0	-	15114983	15114983	8553170	10	938,71,170,1608,137,98,100,338,128,660,	0,1017,1168,1424,4182,4434,4998,7709,8132,8391,
#Partially deleted in new
chr19	15114986	15125785	chr19:15114986-15125785	3	-	15115251	15125059	789624	16	444,106,72,71,170,115,135,137,98,100,112,139,128,202,145,130,	0,579,863,1014,1165,1421,2894,4179,4431,4995,7706,7905,8129,8388,9938,10669,
#Partially deleted in new
chr19	15115015	15125722	chr19:15115015-15125722	1	-	15115251	15123390	789624	15	415,106,72,71,170,115,135,137,98,100,112,139,128,202,67,	0,550,834,985,1136,1392,2865,4150,4402,4966,7677,7876,8100,8359,10640,
#Deleted in new
chr19	15115271	15116782	chr19:15115271-15116782	0	-	15115271	15115271	8553170	5	159,106,72,321,375,	0,294,578,729,1136,
#Partially deleted in new
chr19	15115557	15117931	chr19:15115557-15117931	0	-	15115557	15115557	8553170	5	364,71,170,115,51,	0,443,594,850,2323,
#Deleted in new
chr19	15115859	15116680	chr19:15115859-15116680	0	-	15115859	15115859	8553170	4	62,71,170,273,	0,141,292,548,
#Partially deleted in new
chr19	15115884	15118015	chr19:15115884-15118015	0	-	15115884	15115884	8553170	3	437,115,135,	0,523,1996,
#Partially deleted in new
chr19	15116282	15125666	chr19:15116282-15125666	0	-	15116282	15122757	789624	8	39,115,135,137,98,100,112,11,	0,125,1598,2883,3135,3699,6410,9373,
#Partially deleted in new
chr19	15116461	15125633	chr19:15116461-15125633	0	-	15123219	15125059	789624	10	61,135,137,98,100,112,139,128,145,254,	0,1419,2704,2956,3520,6231,6430,6654,8463,8918,
#Partially deleted in new
chr19	15119245	15125772	chr19:15119245-15125772	0	-	15119245	15119245	8553170	8	57,98,100,112,139,128,202,111,	0,172,736,3447,3646,3870,4129,6416,
#Partially deleted in new
chr19	15119979	15125095	chr19:15119979-15125095	0	-	15119979	15123390	789624	6	102,112,139,128,202,26,	0,2713,2912,3136,3395,5090,
#Partially deleted in new
chr19	15120010	15125362	chr19:15120010-15125362	0	-	15120010	15125059	789624	6	71,112,139,128,202,438,	0,2682,2881,3105,3364,4914,
#Partially deleted in new
chr19	15122997	15125659	chr19:15122997-15125659	0	-	15122997	15125059	789624	5	33,128,202,145,280,	0,118,377,1927,2382,
#Partially deleted in new
chr19	15124159	15126174	chr19:15124159-15126174	3	+	15124159	15124159	8553170	3	66,42,248,	0,304,1767,
#Deleted in new
chr19	15124562	15125716	chr19:15124562-15125716	0	-	15124562	15124562	8553170	2	507,61,	0,1093,
#Partially deleted in new
chr19	15141104	15142062	chr19:15141104-15142062	7	-	15141104	15141104	16724991	1	958,	0,
#Partially deleted in new
chr19	15145214	15145318	chr19:15145214-15145318	3	+	15145214	15145214	8553170	1	104,	0,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr19	15159037	15200981	chr19:15159037-15200981	3	-	15160661	15200905	0	33	2677,98,148,305,163,85,223,155,333,566,119,258,133,185,148,202,226,156,114,152,193,111,234,114,114,186,156,234,123,339,143,79,194,	0,3427,6330,6749,8211,11048,11293,11633,15030,18487,19785,19987,20326,21034,21643,21923,22538,25257,25868,26219,26449,27840,28067,28843,29197,29951,30235,32386,32707,32922,33339,38462,41750,
#Partially deleted in new
chr19	15161624	15170150	chr19:15161624-15170150	0	-	15165390	15170150	789624	5	90,98,148,163,65,	0,840,3743,5624,8461,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	15162332	15165967	chr19:15162332-15165967	0	-	15162359	15165967	789624	3	230,148,181,	0,3035,3454,
#Partially deleted in new
chr19	15177910	15200902	chr19:15177910-15200902	0	-	15177910	15200902	789624	23	180,119,258,133,185,148,202,226,114,152,193,111,234,114,114,186,156,234,123,339,143,79,115,	0,912,1114,1453,2161,2770,3050,3665,6995,7346,7576,8967,9194,9970,10324,11078,11362,13513,13834,14049,14466,19589,22877,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	15178389	15179220	chr19:15178389-15179220	0	-	15178389	15178389	8553170	2	552,196,	0,635,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	15178937	15179659	chr19:15178937-15179659	0	-	15178937	15178937	8553170	3	4,258,296,	0,87,426,
#Deleted in new
chr19	15179282	15179350	chr19:15179282-15179350	3	-	15179282	15179282	5263520	1	68,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	15221014	15222297	chr19:15221014-15222297	3	-	15221014	15221014	8553170	2	224,53,	0,1230,
#Partially deleted in new
chr19	15226918	15232432	chr19:15226918-15232432	1	-	15227436	15232211	789624	7	744,137,104,129,158,86,464,	0,852,1078,4043,4320,4857,5050,
#Partially deleted in new
chr19	15226921	15233047	chr19:15226921-15233047	1	-	15227436	15232211	789624	8	741,137,104,129,158,86,288,128,	0,849,1075,4040,4317,4854,5047,5998,
#Partially deleted in new
chr19	15226924	15233435	chr19:15226924-15233435	3	-	15227436	15232211	789624	9	738,137,104,129,158,86,288,81,84,	0,846,1072,4037,4314,4851,5044,5995,6427,
#Partially deleted in new
chr19	15231348	15233047	chr19:15231348-15233047	0	-	15231348	15232211	789624	4	48,86,288,128,	0,427,620,1571,
#Partially deleted in new
chr19	15235518	15280451	chr19:15235518-15280451	3	-	15238376	15273099	0	20	2927,238,206,131,163,113,588,370,53,111,296,200,210,129,363,290,136,138,319,188,	0,3224,3540,3873,4140,4391,7381,8712,9191,18633,19778,20545,21445,27901,28885,29835,31897,33386,37296,44745,
#Deleted in new
chr19	15244522	15246618	chr19:15244522-15246618	0	-	15244522	15244522	8553170	2	476,111,	0,1985,
#Partially deleted in new
chr19	15247046	15280451	chr19:15247046-15280451	1	-	15249279	15273099	0	12	2244,111,296,200,210,129,363,290,136,138,319,188,	0,7105,8250,9017,9917,16373,17357,18307,20369,21858,25768,33217,
#Partially deleted in new
chr19	15252991	15332545	chr19:15252991-15332545	1	-	15253556	15273099	0	12	792,111,296,200,210,129,363,290,136,138,319,256,	0,1160,2305,3072,3972,10428,11412,12362,14424,15913,19823,79298,
#Deleted in new
chr19	15253750	15255366	chr19:15253750-15255366	0	-	15253750	15253750	8553170	2	512,70,	0,1546,
#Partially deleted in new
chr19	15256098	15331906	chr19:15256098-15331906	0	-	15256098	15273099	789624	9	165,210,129,363,290,136,138,319,71,	0,865,7321,8305,9255,11317,12806,16716,75737,
#Partially deleted in new
chr19	15256134	15264400	chr19:15256134-15264400	0	-	15256134	15256134	8553170	4	129,210,129,283,	0,829,7285,7983,
#Deleted in new
chr19	15256207	15257315	chr19:15256207-15257315	0	-	15256207	15256207	8553170	2	56,352,	0,756,
#Partially deleted in new
chr19	15265626	15332443	chr19:15265626-15332443	0	-	15268263	15273099	789624	6	17,136,128,138,319,154,	0,1789,2527,3278,7188,66663,
#Deleted in new
chr19	15267513	15272981	chr19:15267513-15272981	0	-	15267513	15267513	8553170	4	38,87,138,167,	0,640,1391,5301,
#Partially deleted in new
chr19	15268263	15332540	chr19:15268263-15332540	1	-	15268263	15273099	789624	4	18,138,319,251,	0,641,4551,64026,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	15269012	15331907	chr19:15269012-15331907	0	-	15269012	15273099	789624	4	30,319,183,72,	0,3802,6644,62823,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	15338947	15339237	chr19:15338947-15339237	7	+	15338947	15338947	16724991	1	290,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	15346067	15348417	chr19:15346067-15348417	3	-	15346067	15346067	8553170	2	455,1314,	0,1036,
#Partially deleted in new
chr19	15353384	15379792	chr19:15353384-15379792	3	-	15354914	15379731	789624	14	1986,96,131,94,142,88,34,47,130,490,280,33,39,80,	0,5582,7463,8344,8725,14850,16761,18567,18833,19466,20401,21218,23591,26328,
#Partially deleted in new
chr19	15353520	15373151	chr19:15353520-15373151	0	-	15369201	15373151	789624	11	1850,96,131,94,142,88,158,34,47,130,301,	0,5446,7327,8208,8589,14714,15546,16625,18431,18697,19330,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	15361472	15379781	chr19:15361472-15379781	0	-	15361472	15361472	8553170	8	350,142,88,34,47,130,490,69,	0,637,6762,8673,10479,10745,11378,18240,
#Partially deleted in new
chr19	15370144	15379798	chr19:15370144-15379798	0	-	15373029	15379731	789624	7	35,47,130,490,33,39,86,	0,1807,2073,2706,4458,6831,9568,
#Partially deleted in new
chr19	15373716	15379161	chr19:15373716-15379161	0	-	15373716	15373716	8553170	4	349,33,39,136,	0,886,3259,5309,
#Deleted in new
chr19	15379075	15380846	chr19:15379075-15380846	0	+	15379075	15379075	8553170	1	1771,	0,
#Deleted in new
chr19	15379311	15381194	chr19:15379311-15381194	3	+	15379311	15379311	8553170	2	97,140,	0,1743,
#Partially deleted in new
chr19	15380047	15419054	chr19:15380047-15419054	3	-	15380121	15418923	789624	14	383,96,131,106,142,109,64,71,97,454,241,33,75,144,	0,469,17102,17472,17666,19254,20247,20746,20899,21102,23427,23962,30472,38863,
#Partially deleted in new
chr19	15380049	15419121	chr19:15380049-15419121	0	-	15403538	15418923	789624	16	381,96,131,106,142,137,109,64,71,97,454,81,63,33,75,211,	0,467,17100,17470,17664,18580,19252,20245,20744,20897,21100,23425,23603,23960,30470,38861,
#Partially deleted in new
chr19	15380049	15419026	chr19:15380049-15419026	1	-	15380121	15418923	789624	14	381,96,131,106,142,109,64,71,97,454,58,33,75,116,	0,467,17100,17470,17664,19252,20245,20744,20897,21100,23608,23960,30470,38861,
#Partially deleted in new
chr19	15380049	15418988	chr19:15380049-15418988	0	-	15397751	15418923	789624	16	381,96,131,106,142,137,109,64,71,97,454,81,58,33,75,78,	0,467,17100,17470,17664,18580,19252,20245,20744,20897,21100,23425,23608,23960,30470,38861,
#Partially deleted in new
chr19	15380050	15418988	chr19:15380050-15418988	0	-	15380050	15380050	8553170	14	380,96,131,106,142,781,64,71,97,454,241,33,75,78,	0,466,17099,17469,17663,18579,20244,20743,20896,21099,23424,23959,30469,38860,
#Partially deleted in new
chr19	15381881	15398761	chr19:15381881-15398761	0	-	15381881	15381881	8553170	5	168,131,106,142,132,	0,15268,15638,15832,16748,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	15383201	15383832	chr19:15383201-15383832	3	-	15383201	15383201	8553170	1	631,	0,
#Deleted in new
chr19	15397519	15398403	chr19:15397519-15398403	0	-	15397519	15397519	8553170	2	106,690,	0,194,
#Partially deleted in new
chr19	15397519	15401276	chr19:15397519-15401276	0	-	15397519	15397519	8553170	8	106,142,74,109,64,71,97,127,	0,194,1110,1782,2775,3274,3427,3630,
#Deleted in new
chr19	15398562	15400352	chr19:15398562-15400352	0	-	15398562	15398562	8553170	2	848,58,	0,1732,
#Deleted in new
chr19	15398695	15400356	chr19:15398695-15400356	3	+	15398695	15398695	8553170	1	1661,	0,
#Partially deleted in new
chr19	15399934	15418968	chr19:15399934-15418968	0	-	15399934	15399934	8553170	8	424,71,97,454,241,33,75,58,	0,859,1012,1215,3540,4075,10585,18976,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	15400399	15401276	chr19:15400399-15401276	0	-	15400399	15400399	8553170	3	465,97,127,	0,547,750,
#Partially deleted in new
chr19	15400967	15417698	chr19:15400967-15417698	0	-	15400967	15400967	8553170	7	76,144,81,58,33,75,64,	0,182,2507,2690,3042,9552,16667,
#Partially deleted in new
chr19	15401294	15419020	chr19:15401294-15419020	0	-	15403538	15418923	789624	5	309,81,33,75,110,	0,2180,2715,9225,17616,
#Partially deleted in new
chr19	15401380	15417678	chr19:15401380-15417678	0	-	15401380	15401380	8553170	6	223,81,58,33,75,44,	0,2094,2277,2629,9139,16254,
#Partially deleted in new
chr19	15401429	15419022	chr19:15401429-15419022	0	-	15401429	15401429	8553170	4	174,568,75,112,	0,2045,9090,17481,
#Deleted in new
chr19	15401430	15404285	chr19:15401430-15404285	0	-	15401430	15401430	8553170	5	173,81,58,33,125,	0,2044,2227,2579,2730,
#Partially deleted in new
chr19	15401444	15418988	chr19:15401444-15418988	0	-	15401444	15418923	789624	4	159,241,75,78,	0,2030,9075,17466,
#Partially deleted in new
chr19	15401452	15419141	chr19:15401452-15419141	0	-	15401452	15403650	789624	5	151,241,33,75,83,	0,2022,2557,9067,17606,
#Partially deleted in new
chr19	15401539	15418988	chr19:15401539-15418988	0	-	15401539	15418923	789624	4	64,331,75,78,	0,1935,8980,17371,
#Partially deleted in new
chr19	15403318	15418988	chr19:15403318-15418988	0	-	15403318	15403318	8553170	4	397,33,75,78,	0,691,7201,15592,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	15419979	15449951	chr19:15419979-15449951	1	-	15423075	15448307	789624	8	3256,196,420,528,552,324,265,154,	0,4203,4633,5261,7002,16826,28123,29818,
#Partially deleted in new
chr19	15421507	15431150	chr19:15421507-15431150	1	-	15423075	15431150	789624	7	1728,196,420,528,552,504,139,	0,2675,3105,3733,5474,8078,9504,
#Partially deleted in new
chr19	15421507	15431150	chr19:15421507-15431150	1	-	15423075	15431150	789624	8	1728,196,420,528,552,399,504,139,	0,2675,3105,3733,5474,6602,8078,9504,
#Partially deleted in new
chr19	15421522	15433290	chr19:15421522-15433290	1	-	15423075	15431159	789624	9	1713,196,420,528,552,399,504,171,126,	0,2660,3090,3718,5459,6587,8063,9489,11642,
#Partially deleted in new
chr19	15422086	15432557	chr19:15422086-15432557	1	-	15423075	15431159	789624	8	1149,196,420,528,552,504,171,124,	0,2096,2526,3154,4895,7499,8925,10347,
#Partially deleted in new
chr19	15422090	15449951	chr19:15422090-15449951	3	-	15423075	15448307	789624	11	1145,196,420,528,552,504,324,2138,73,265,154,	0,2092,2522,3150,4891,7495,14715,16487,20585,26012,27707,
#Partially deleted in new
chr19	15422093	15449941	chr19:15422093-15449941	0	-	15437116	15448307	8553170	11	1142,196,420,528,552,504,171,324,73,265,144,	0,2089,2519,3147,4888,7492,8918,14712,20582,26009,27704,
#Deleted in new
chr19	15424059	15424839	chr19:15424059-15424839	0	-	15424059	15424059	8553170	2	319,227,	0,553,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	15436474	15438927	chr19:15436474-15438927	0	-	15436474	15436474	8553170	2	655,350,	0,2103,
#Partially deleted in new
chr19	15436933	15449608	chr19:15436933-15449608	0	-	15436933	15448307	789624	3	196,265,142,	0,11169,12533,
#Deleted in new
chr19	15449547	15449608	chr19:15449547-15449608	3	+	15449547	15449547	5263520	1	61,	0,
#Partially deleted in new
chr19	15451623	15464571	chr19:15451623-15464571	3	-	15451794	15464358	789624	18	315,64,158,391,119,202,237,145,145,543,99,127,56,62,79,137,347,67,	0,421,1034,1483,2525,2737,3033,4480,4878,5668,6704,6905,8579,9436,9594,9847,12407,12881,
#Partially deleted in new
chr19	15451623	15464514	chr19:15451623-15464514	0	-	15451623	15451623	8553170	16	315,771,391,119,202,237,145,145,1135,127,56,62,79,137,347,10,	0,421,1483,2525,2737,3033,4480,4878,5668,6905,8579,9436,9594,9847,12407,12881,
#Partially deleted in new
chr19	15451623	15454375	chr19:15451623-15454375	0	-	15452653	15454375	789624	4	1192,391,119,15,	0,1483,2525,2737,
#Partially deleted in new
chr19	15451657	15456599	chr19:15451657-15456599	0	-	15451794	15456599	789624	7	281,391,119,202,237,145,98,	0,1449,2491,2703,2999,4446,4844,
#Deleted in new
chr19	15456164	15456891	chr19:15456164-15456891	0	-	15456164	15456164	8553170	3	84,145,114,	0,337,613,
#Deleted in new
chr19	15456375	15457319	chr19:15456375-15457319	0	-	15456375	15456375	8553170	2	271,28,	0,916,
#Deleted in new
chr19	15457468	15458117	chr19:15457468-15458117	0	-	15457468	15457468	8553170	2	366,196,	0,453,
#Partially deleted in new
chr19	15468644	15479501	chr19:15468644-15479501	1	-	15469367	15479371	789624	4	1285,211,1071,191,	0,3245,6893,10666,
#Partially deleted in new
chr19	15468644	15479852	chr19:15468644-15479852	3	-	15468662	15479371	789624	5	108,298,211,1071,542,	0,987,3245,6893,10666,
#Partially deleted in new
chr19	15476234	15498956	chr19:15476234-15498956	0	-	15476234	15480242	789624	4	374,125,53,26,	0,3076,3964,22696,
#Partially deleted in new
chr19	15476352	15479831	chr19:15476352-15479831	0	-	15476352	15479371	789624	3	256,125,270,	0,2958,3209,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	15508492	15552317	chr19:15508492-15552317	3	+	15525336	15551471	789624	14	91,107,223,145,54,128,122,268,67,130,134,65,83,1024,	0,15200,16843,21216,28868,29042,29379,31957,35478,35657,39615,40645,42181,42801,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	15515341	15516836	chr19:15515341-15516836	7	-	15515341	15515341	16724991	3	99,34,182,	0,734,1313,
#Partially deleted in new
chr19	15525332	15552316	chr19:15525332-15552316	1	+	15525336	15551471	789624	12	226,145,54,128,122,268,67,130,134,65,83,1023,	0,4376,12028,12202,12539,15117,18638,18817,22775,23805,25341,25961,
#Partially deleted in new
chr19	15564073	15584709	chr19:15564073-15584709	7	+	15564073	15564073	16724991	12	201,145,58,128,122,267,67,130,143,65,83,170,	0,7660,9519,9664,11640,12495,13099,13357,19276,19506,20050,20466,
#Partially deleted in new
chr19	15571761	15573650	chr19:15571761-15573650	4	+	15571761	15571761	16724991	2	117,58,	0,1831,
#Deleted in new
chr19	15611622	15611909	chr19:15611622-15611909	7	-	15611622	15611622	16724991	1	287,	0,
#Deleted in new
chr19	15611656	15612122	chr19:15611656-15612122	7	+	15611656	15611656	16724991	1	466,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	15613246	15614553	chr19:15613246-15614553	3	-	15613246	15613246	8553170	2	211,391,	0,916,
#Partially deleted in new
chr19	15615217	15629472	chr19:15615217-15629472	0	+	15615616	15623116	789624	9	63,199,271,67,130,134,65,83,280,	0,398,7887,8481,8747,13084,13313,13543,13975,
#Partially deleted in new
chr19	15615217	15629225	chr19:15615217-15629225	0	+	15615217	15615217	8553170	11	63,199,145,273,122,271,67,130,134,83,33,	0,398,2782,4272,7001,7887,8481,8747,13084,13543,13975,
#Partially deleted in new
chr19	15615217	15622312	chr19:15615217-15622312	0	+	15615361	15622312	789624	6	158,199,145,54,128,94,	0,398,2782,4272,4417,7001,
#Partially deleted in new
chr19	15615218	15618797	chr19:15615218-15618797	0	+	15615218	15615218	8553170	3	62,199,798,	0,397,2781,
#Partially deleted in new
chr19	15615220	15629623	chr19:15615220-15629623	3	+	15615616	15629358	789624	13	60,199,145,54,128,122,271,67,130,134,65,83,431,	0,395,2779,4269,4414,6998,7884,8478,8744,13081,13310,13540,13972,
#Partially deleted in new
chr19	15615220	15629452	chr19:15615220-15629452	0	+	15615220	15615220	8553170	9	594,1763,271,67,130,134,65,83,260,	0,2779,7884,8478,8744,13081,13310,13540,13972,
#Deleted in new
chr19	15621675	15623209	chr19:15621675-15623209	0	+	15621675	15621675	8553170	2	665,105,	0,1429,
#Partially deleted in new
chr19	15622813	15629232	chr19:15622813-15629232	0	+	15622813	15622813	8553170	7	562,67,130,134,65,83,40,	0,885,1151,5488,5717,5947,6379,
#Partially deleted in new
chr19	15623551	15629452	chr19:15623551-15629452	0	+	15623551	15623551	8553170	6	214,130,134,65,83,260,	0,413,4750,4979,5209,5641,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	15627172	15630638	chr19:15627172-15630638	0	+	15627172	15627172	8553170	2	1671,1446,	0,2020,
#Deleted in new
chr19	15628323	15629452	chr19:15628323-15629452	0	+	15628323	15628323	8553170	2	112,260,	0,869,
#Deleted in new
chr19	15628348	15629635	chr19:15628348-15629635	0	+	15628348	15629358	789624	4	87,65,83,353,	0,182,412,934,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	15640896	15660126	chr19:15640896-15660126	1	+	15641415	15659385	789624	13	33,199,145,54,128,122,271,67,130,134,65,83,907,	0,518,3010,6155,6300,8263,9016,11672,11926,17367,17594,17830,18323,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	15640896	15659759	chr19:15640896-15659759	0	+	15640896	15640896	8553170	12	49,199,145,273,122,271,67,130,134,65,83,540,	0,518,3010,6155,8263,9016,11672,11926,17367,17594,17830,18323,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	15640899	15662825	chr19:15640899-15662825	3	+	15641415	15659385	789624	13	46,199,145,54,128,122,271,67,130,134,65,83,3606,	0,515,4819,6152,6297,8260,9013,11669,11923,17364,17591,17827,18320,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	15640899	15660758	chr19:15640899-15660758	1	+	15641415	15659385	789624	13	46,199,145,54,128,122,271,67,130,134,65,83,1539,	0,515,3007,6152,6297,8260,9013,11669,11923,17364,17591,17827,18320,
#Partially deleted in new
chr19	15641293	15649216	chr19:15641293-15649216	0	+	15641415	15647093	789624	4	320,54,128,57,	0,5758,5903,7866,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	15641308	15659771	chr19:15641308-15659771	1	+	15641415	15659385	789624	12	305,145,54,128,122,271,67,130,134,65,83,552,	0,2598,5743,5888,7851,8604,11260,11514,16955,17182,17418,17911,
#Deleted in new
chr19	15645754	15647279	chr19:15645754-15647279	0	+	15645754	15645754	8553170	2	109,228,	0,1297,
#Partially deleted in new
chr19	15649979	15658316	chr19:15649979-15658316	0	+	15649979	15650204	789624	4	311,67,130,53,	0,2589,2843,8284,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	15660488	15661293	chr19:15660488-15661293	0	+	15660488	15660488	8553170	2	279,96,	0,709,
#Partially deleted in new
chr19	15664105	15669826	chr19:15664105-15669826	7	+	15664105	15664105	16724991	6	53,127,115,267,59,131,	0,151,2124,2869,5342,5590,
#Partially deleted in new
chr19	15672756	15697174	chr19:15672756-15697174	3	+	15673529	15697085	789624	13	379,199,145,54,128,122,271,67,130,134,65,83,267,	0,772,5504,7487,7635,9632,10736,12059,12311,23179,23404,23673,24151,
#Partially deleted in new
chr19	15673017	15682447	chr19:15673017-15682447	0	+	15673529	15680419	789624	6	118,199,69,20,128,59,	0,511,5243,7260,7374,9371,
#Partially deleted in new
chr19	15673045	15680586	chr19:15673045-15680586	0	+	15673045	15673045	8553170	5	90,199,69,20,195,	0,483,5215,7232,7346,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	15673075	15681142	chr19:15673075-15681142	0	+	15673075	15673075	8553170	4	60,199,145,899,	0,453,5185,7168,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	15673075	15680944	chr19:15673075-15680944	0	+	15673075	15673075	8553170	5	60,199,145,54,553,	0,453,5185,7168,7316,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	15673075	15682435	chr19:15673075-15682435	0	+	15673529	15680285	789624	7	60,199,54,128,104,38,47,	0,453,7168,7316,7984,8609,9313,
#Partially deleted in new
chr19	15673081	15697148	chr19:15673081-15697148	0	+	15673081	15673081	789624	11	54,199,69,276,122,271,67,130,134,352,241,	0,447,5179,7162,9307,10411,11734,11986,22854,23079,23826,
#Partially deleted in new
chr19	15673086	15681127	chr19:15673086-15681127	0	+	15673529	15680285	789624	6	49,199,69,54,128,68,	0,442,5174,7157,7305,7973,
#Partially deleted in new
chr19	15673086	15680524	chr19:15673086-15680524	0	+	15673086	15673086	8553170	4	49,199,69,281,	0,442,5174,7157,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	15673086	15680662	chr19:15673086-15680662	0	+	15673086	15673086	8553170	4	49,199,54,271,	0,442,7157,7305,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	15673087	15680707	chr19:15673087-15680707	0	+	15673087	15673087	8553170	5	48,199,69,54,316,	0,441,5173,7156,7304,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	15673089	15697143	chr19:15673089-15697143	0	+	15673529	15680285	789624	11	46,199,69,54,128,122,1390,130,134,352,236,	0,439,5171,7154,7302,9299,10403,11978,22846,23071,23818,
#Partially deleted in new
chr19	15673089	15678565	chr19:15673089-15678565	0	+	15673089	15673089	8553170	3	46,199,305,	0,439,5171,
#Partially deleted in new
chr19	15673111	15680252	chr19:15673111-15680252	0	+	15673224	15680252	789624	3	170,145,9,	0,5149,7132,
#Partially deleted in new
chr19	15673477	15697145	chr19:15673477-15697145	1	+	15673529	15697085	789624	12	250,145,54,128,122,271,67,130,134,65,83,238,	0,4783,6766,6914,8911,10015,11338,11590,22458,22683,22952,23430,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	15681436	15697143	chr19:15681436-15697143	0	+	15681436	15681436	8553170	7	1074,271,67,130,134,352,236,	0,2056,3379,3631,14499,14724,15471,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	15681500	15697143	chr19:15681500-15697143	0	+	15681500	15681500	8553170	6	1014,1390,130,134,352,236,	0,1992,3567,14435,14660,15407,
#Deleted in new
chr19	15728019	15729060	chr19:15728019-15729060	3	+	15728043	15728991	789624	1	1041,	0,
#Partially deleted in new
chr19	15737984	15742343	chr19:15737984-15742343	3	+	15741392	15742343	789624	2	67,962,	0,3397,
#Deleted in new
chr19	15741392	15742343	chr19:15741392-15742343	1	+	15741392	15742343	789624	1	951,	0,
#Partially deleted in new
chr19	15760240	15779909	chr19:15760240-15779909	7	-	15760240	15760240	16724991	11	180,83,65,167,130,67,270,148,128,145,197,	0,574,844,968,9344,9672,10745,11791,13822,16157,19472,
#Partially deleted in new
chr19	15760374	15770828	chr19:15760374-15770828	3	+	15760374	15760374	8553170	2	529,32,	0,10422,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	15787660	15801025	chr19:15787660-15801025	3	+	15794048	15794996	789624	2	56,6988,	0,6377,
#Deleted in new
chr19	15793950	15795082	chr19:15793950-15795082	1	+	15794048	15794996	789624	1	1132,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	15804548	15815664	chr19:15804548-15815664	3	-	15807080	15808037	789624	4	3500,117,649,110,	0,4176,7681,11006,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	15807002	15808126	chr19:15807002-15808126	1	-	15807080	15808037	789624	1	1124,	0,
#Partially deleted in new
chr19	15821795	15823797	chr19:15821795-15823797	7	-	15821795	15821795	16724991	2	522,117,	0,1885,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	15827044	15835787	chr19:15827044-15835787	3	-	15827044	15827044	8553170	2	180,261,	0,8482,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	15828205	15836136	chr19:15828205-15836136	3	+	15828205	15828205	8553170	5	193,538,102,613,919,	0,595,3049,6296,7012,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	15828536	15835417	chr19:15828536-15835417	0	+	15828536	15828536	8553170	4	802,102,613,200,	0,2718,5965,6681,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	15828578	15836326	chr19:15828578-15836326	0	+	15828578	15828578	8553170	3	760,102,1825,	0,2676,5923,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	15828883	15836319	chr19:15828883-15836319	0	+	15828883	15828883	8553170	3	455,102,1102,	0,2371,6334,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	15828950	15835417	chr19:15828950-15835417	0	+	15828950	15828950	8553170	4	388,83,613,200,	0,2304,5551,6267,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	15828957	15835415	chr19:15828957-15835415	1	+	15828957	15828957	8553170	3	381,149,914,	0,2250,5544,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	15829050	15835417	chr19:15829050-15835417	0	+	15829050	15829050	8553170	4	288,102,479,200,	0,2204,5585,6167,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	15829094	15836314	chr19:15829094-15836314	0	+	15829094	15829094	789624	3	244,102,1679,	0,2160,5541,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	15829094	15836321	chr19:15829094-15836321	0	+	15829094	15829094	8553170	4	244,102,63,568,	0,2160,6123,6659,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	15829094	15835416	chr19:15829094-15835416	0	+	15829094	15829094	8553170	2	244,915,	0,5407,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	15829094	15835417	chr19:15829094-15835417	0	+	15829094	15829094	8553170	3	244,159,916,	0,2103,5407,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	15829094	15835415	chr19:15829094-15835415	0	+	15829094	15829094	8553170	3	244,613,198,	0,5407,6123,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	15829094	15835416	chr19:15829094-15835416	0	+	15829094	15829094	8553170	4	244,102,539,199,	0,2160,5481,6123,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	15829094	15836303	chr19:15829094-15836303	1	+	15829094	15829094	8553170	5	244,102,613,63,550,	0,2160,5407,6123,6659,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	15829094	15835416	chr19:15829094-15835416	0	+	15829094	15829094	8553170	4	244,102,613,163,	0,2160,5407,6159,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	15829094	15836320	chr19:15829094-15836320	0	+	15829094	15829094	8553170	4	244,102,63,767,	0,2160,6123,6459,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	15829094	15835695	chr19:15829094-15835695	0	+	15829094	15829094	8553170	4	244,102,779,142,	0,2160,5407,6459,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	15829094	15835419	chr19:15829094-15835419	0	+	15829094	15829094	8553170	4	244,102,613,232,	0,2160,5407,6093,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	15829094	15835419	chr19:15829094-15835419	0	+	15829094	15829094	8553170	3	244,102,809,	0,2160,5516,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	15829094	15835416	chr19:15829094-15835416	0	+	15829094	15829094	8553170	3	244,83,915,	0,2160,5407,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	15829094	15835422	chr19:15829094-15835422	0	+	15829094	15829094	8553170	3	244,83,205,	0,2160,6123,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	15829094	15835416	chr19:15829094-15835416	0	+	15829094	15829094	8553170	3	244,149,781,	0,2113,5541,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	15829094	15835416	chr19:15829094-15835416	0	+	15829094	15829094	8553170	4	244,159,613,199,	0,2103,5407,6123,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	15829094	15835418	chr19:15829094-15835418	0	+	15829094	15829094	8553170	4	244,102,613,240,	0,2160,5407,6084,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	15829094	15836240	chr19:15829094-15836240	0	+	15829094	15829094	8553170	3	244,63,687,	0,6123,6459,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	15829097	15834951	chr19:15829097-15834951	0	+	15829097	15829097	8553170	4	241,102,62,450,	0,2157,4473,5404,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	15830541	15835417	chr19:15830541-15835417	0	+	15830541	15830541	8553170	2	815,916,	0,3960,
#Deleted in new
chr19	15834318	15835419	chr19:15834318-15835419	0	+	15834318	15834318	8553170	2	796,202,	0,899,
#Deleted in new
chr19	15834729	15834804	chr19:15834729-15834804	3	+	15834729	15834729	8553170	1	75,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	15835105	15835853	chr19:15835105-15835853	1	-	15835105	15835105	8553170	2	162,218,	0,530,
#Partially deleted in new
chr19	15851992	15864904	chr19:15851992-15864904	7	-	15851992	15851992	16724991	3	257,104,89,	0,2740,12823,
#Partially deleted in new
chr19	15852042	15862975	chr19:15852042-15862975	4	-	15852042	15852042	16724991	3	207,104,64,	0,2690,10869,
#Partially deleted in new
chr19	15852110	15863802	chr19:15852110-15863802	5	-	15852110	15852110	16724991	5	139,104,151,90,83,	0,2622,5807,10801,11609,
#Deleted in new
chr19	15871666	15871852	chr19:15871666-15871852	7	-	15871666	15871666	16724991	1	186,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	15878022	15898120	chr19:15878022-15898120	3	-	15878770	15897611	789624	13	914,83,65,134,130,67,271,122,128,54,145,199,95,	0,1323,1581,1741,7901,8219,11400,12289,14286,14506,17483,19391,20003,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	15878022	15898074	chr19:15878022-15898074	0	-	15878022	15878022	8553170	11	914,83,65,134,130,67,271,122,274,145,49,	0,1323,1581,1741,7901,8219,11400,12289,14286,17483,20003,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	15878299	15898057	chr19:15878299-15898057	1	-	15878770	15897611	789624	13	637,83,65,134,130,67,271,122,128,54,145,199,32,	0,1046,1304,1464,7624,7942,11123,12012,14009,14229,15437,19114,19726,
#Partially deleted in new
chr19	15878622	15886025	chr19:15878622-15886025	0	-	15878898	15886025	789624	3	314,83,102,	0,723,7301,
#Partially deleted in new
chr19	15879636	15886501	chr19:15879636-15886501	0	-	15879636	15879636	8553170	3	32,134,578,	0,127,6287,
#Partially deleted in new
chr19	15879893	15898071	chr19:15879893-15898071	0	-	15892418	15897611	789624	8	4,130,271,122,128,54,199,46,	0,6030,9529,10418,12415,12635,17520,18132,
#Partially deleted in new
chr19	15892372	15897729	chr19:15892372-15897729	0	-	15892372	15897611	789624	4	64,54,145,316,	0,156,3133,5041,
#Partially deleted in new
chr19	15892385	15898077	chr19:15892385-15898077	0	-	15892385	15892385	8553170	4	197,145,199,52,	0,3120,5028,5640,
#Deleted in new
chr19	15902299	15903238	chr19:15902299-15903238	7	-	15902299	15902299	16724991	1	939,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	15904555	15907234	chr19:15904555-15907234	3	+	15904555	15904555	8553170	1	2679,	0,
#Partially deleted in new
chr19	15910581	15911824	chr19:15910581-15911824	7	-	15910581	15910581	16724991	1	1243,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	15912366	15934867	chr19:15912366-15934867	3	-	15913731	15934408	789624	13	1543,83,65,134,130,67,271,122,128,54,145,199,36,	0,1938,2235,2395,9670,9997,11445,12394,14845,15063,17090,21844,22465,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	15912366	15934410	chr19:15912366-15934410	1	-	15913876	15934408	789624	11	1543,83,134,130,67,271,122,128,54,145,200,	0,1938,2395,9670,9997,11445,12394,14845,15063,17090,21844,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	15912369	15934866	chr19:15912369-15934866	1	-	15913876	15934408	789624	12	1540,83,134,130,67,271,122,128,54,145,199,35,	0,1935,2392,9667,9994,11442,12391,14842,15060,17087,21841,22462,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	15912572	15934835	chr19:15912572-15934835	1	-	15913731	15934408	789624	12	1337,83,65,134,130,67,271,122,128,54,145,625,	0,1732,2029,2189,9464,9791,11239,12188,14639,14857,16884,21638,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	15912938	15928111	chr19:15912938-15928111	1	-	15913731	15922373	789624	9	971,83,65,134,130,67,271,128,682,	0,1366,1663,1823,9098,9425,10873,14273,14491,
#Deleted in new
chr19	15949007	15949958	chr19:15949007-15949958	3	+	15949007	15949958	789624	1	951,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	15979834	15999020	chr19:15979834-15999020	7	-	15979834	15979834	16724991	12	148,83,65,134,134,73,223,46,122,128,54,129,	0,1074,1339,1499,10078,10406,12279,12576,13257,17468,17693,19057,
#Deleted in new
chr19	16015286	16018953	chr19:16015286-16018953	0	+	16015286	16015286	8553170	4	73,231,72,168,	0,1684,3254,3499,
#Partially deleted in new
chr19	16015633	16027460	chr19:16015633-16027460	3	+	16015633	16015633	789624	9	156,72,40,81,177,23,226,225,2340,	0,2907,4954,5448,6254,7046,7676,8819,9487,
#Partially deleted in new
chr19	16015633	16022588	chr19:16015633-16022588	0	+	16015633	16015633	8553170	6	156,72,40,81,177,43,	0,2907,4954,5448,6254,6912,
#Deleted in new
chr19	16016904	16018755	chr19:16016904-16018755	0	+	16016904	16016904	8553170	2	297,215,	0,1636,
#Deleted in new
chr19	16019718	16020290	chr19:16019718-16020290	3	+	16019718	16019718	8553170	1	572,	0,
#Partially deleted in new
chr19	16021925	16027462	chr19:16021925-16027462	0	+	16021925	16021925	8553170	5	139,75,226,247,443,	0,702,1384,2505,5094,
#Partially deleted in new
chr19	16021988	16027036	chr19:16021988-16027036	0	+	16021988	16021988	8553170	5	76,75,226,225,17,	0,639,1321,2464,5031,
#Partially deleted in new
chr19	16022657	16025179	chr19:16022657-16025179	0	+	16022657	16022657	8553170	4	45,226,247,59,	0,652,1773,2463,
#Deleted in new
chr19	16031306	16034848	chr19:16031306-16034848	0	+	16031306	16031306	8553170	2	98,369,	0,3173,
#Deleted in new
chr19	16031629	16034788	chr19:16031629-16034788	0	+	16031629	16031629	8553170	2	241,304,	0,2855,
#Deleted in new
chr19	16031741	16035647	chr19:16031741-16035647	0	+	16031741	16031741	8553170	3	129,159,177,	0,3112,3729,
#Deleted in new
chr19	16033316	16035627	chr19:16033316-16035627	0	+	16033316	16033316	8553170	3	37,272,157,	0,1424,2154,
#Partially deleted in new
chr19	16033653	16042116	chr19:16033653-16042116	3	+	16033653	16033653	789624	5	175,533,252,130,678,	0,826,1817,2234,7785,
#Partially deleted in new
chr19	16034119	16042111	chr19:16034119-16042111	1	+	16034119	16034119	789624	5	87,272,252,130,673,	0,621,1351,1768,7319,
#Deleted in new
chr19	16034775	16036537	chr19:16034775-16036537	7	-	16034775	16034775	16724991	1	1762,	0,
#Deleted in new
chr19	16035470	16036478	chr19:16035470-16036478	0	+	16035470	16035470	8553170	2	252,591,	0,417,
#Deleted in new
chr19	16037008	16038455	chr19:16037008-16038455	7	-	16037008	16037008	16724991	3	200,183,153,	0,248,1294,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	16051928	16052689	chr19:16051928-16052689	7	+	16051928	16051928	16724991	1	761,	0,
#Deleted in new
chr19	16065736	16066312	chr19:16065736-16066312	3	+	16065736	16065736	8553170	3	19,169,208,	0,131,368,
#Partially deleted in new
chr19	16067020	16076141	chr19:16067020-16076141	0	+	16067624	16076141	789624	3	286,205,95,	0,513,9026,
#Partially deleted in new
chr19	16067506	16101790	chr19:16067506-16101790	1	+	16067624	16101346	789624	9	232,126,134,118,71,76,63,70,527,	0,8540,14406,18916,20520,21538,26029,26177,33757,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	16067537	16102943	chr19:16067537-16102943	3	+	16067624	16101346	789624	9	201,126,134,118,71,76,63,70,1680,	0,8509,14375,18885,20489,21507,25998,26146,33726,
#Partially deleted in new
chr19	16067699	16088093	chr19:16067699-16088093	0	+	16067896	16088093	789624	5	263,126,134,118,67,	0,8347,14213,18723,20327,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	16074292	16077395	chr19:16074292-16077395	3	-	16074292	16074292	8553170	1	3103,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	16075674	16102948	chr19:16075674-16102948	0	+	16086426	16093544	789624	9	201,126,134,118,71,76,63,70,1685,	0,372,6238,10748,12352,13370,17861,18009,25589,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	16075679	16102939	chr19:16075679-16102939	1	+	16075706	16101346	789624	9	30,126,134,118,71,76,63,70,1676,	0,367,6233,10743,12347,13365,17856,18004,25584,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	16076072	16102969	chr19:16076072-16102969	0	+	16076072	16093060	789624	9	100,134,118,71,76,93,63,70,1706,	0,5840,10350,11954,12972,16967,17463,17611,25191,
#Partially deleted in new
chr19	16076099	16093564	chr19:16076099-16093564	0	+	16086426	16093564	789624	5	73,118,71,76,29,	0,10323,11927,12945,17436,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	16076305	16103005	chr19:16076305-16103005	1	+	16076565	16101346	789624	8	392,134,118,71,76,63,70,1742,	0,5607,10117,11721,12739,17230,17378,24958,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	16076438	16102948	chr19:16076438-16102948	0	+	16076565	16095346	789624	9	259,134,118,71,76,63,70,630,1685,	0,5474,9984,11588,12606,17097,17245,18825,24825,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	16076455	16102970	chr19:16076455-16102970	0	+	16076565	16095346	789624	10	242,134,118,71,76,63,70,328,118,1707,	0,5457,9967,11571,12589,17080,17228,18808,19320,24808,
#Partially deleted in new
chr19	16076498	16088452	chr19:16076498-16088452	0	+	16076498	16076498	8553170	4	199,134,118,426,	0,5414,9924,11528,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	16076502	16102943	chr19:16076502-16102943	1	+	16076565	16101346	789624	8	195,134,118,71,76,63,70,1680,	0,5410,9920,11524,12542,17033,17181,24761,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	16076520	16102965	chr19:16076520-16102965	0	+	16076565	16093060	789624	9	177,134,118,71,76,93,63,70,1702,	0,5392,9902,11506,12524,16519,17015,17163,24743,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	16076651	16102946	chr19:16076651-16102946	0	+	16076651	16095346	789624	9	46,134,118,71,76,63,70,94,1683,	0,5261,9771,11375,12393,16884,17032,18612,24612,
#Partially deleted in new
chr19	16077020	16088066	chr19:16077020-16088066	0	+	16080952	16088066	789624	5	110,161,134,118,40,	0,3894,4892,9402,11006,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	16077020	16102939	chr19:16077020-16102939	1	+	16078139	16101346	789624	10	110,193,56,134,118,71,76,63,70,1676,	0,936,3999,4892,9402,11006,12024,16515,16663,24243,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	16079739	16102149	chr19:16079739-16102149	0	+	16079739	16079739	8553170	8	703,134,118,71,76,63,70,886,	0,2173,6683,8287,9305,13796,13944,21524,
#Partially deleted in new
chr19	16081722	16093581	chr19:16081722-16093581	0	+	16086426	16093581	789624	5	324,118,71,76,46,	0,4700,6304,7322,11813,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	16088058	16102377	chr19:16088058-16102377	0	+	16088058	16101346	789624	6	39,76,63,70,146,318,	0,986,5477,5625,13205,14001,
#Partially deleted in new
chr19	16088638	16093598	chr19:16088638-16093598	0	+	16088638	16088638	8553170	2	482,63,	0,4897,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	16088710	16102946	chr19:16088710-16102946	0	+	16088710	16088710	8553170	5	139,76,63,70,1683,	0,334,4825,4973,12553,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	16099666	16102338	chr19:16099666-16102338	0	+	16099666	16099666	8553170	1	2672,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	16103760	16104254	chr19:16103760-16104254	3	-	16103760	16103760	8553170	2	213,154,	0,340,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	16111628	16134234	chr19:16111628-16134234	3	+	16111901	16132304	0	8	397,61,61,78,90,66,51,2023,	0,6597,10121,13841,15808,16397,17925,20583,
#Partially deleted in new
chr19	16111891	16122132	chr19:16111891-16122132	0	+	16111891	16111891	8553170	3	134,61,383,	0,6334,9858,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	16111894	16112757	chr19:16111894-16112757	0	+	16111894	16111894	8553170	2	131,389,	0,474,
#Partially deleted in new
chr19	16111896	16133010	chr19:16111896-16133010	1	+	16111901	16132324	0	8	129,61,61,78,90,66,31,799,	0,6329,9853,13573,15540,16129,17677,20315,
#Partially deleted in new
chr19	16111896	16127661	chr19:16111896-16127661	0	+	16111896	16111896	8553170	5	129,61,61,78,225,	0,6329,9853,13573,15540,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	16111914	16126990	chr19:16111914-16126990	0	+	16111914	16111914	8553170	4	111,61,61,1521,	0,6311,9835,13555,
#Partially deleted in new
chr19	16123660	16139892	chr19:16123660-16139892	3	-	16123660	16123660	8553170	2	2829,158,	0,16074,
#Partially deleted in new
chr19	16127950	16132319	chr19:16127950-16132319	0	+	16127950	16127950	8553170	3	141,51,108,	0,1603,4261,
#Partially deleted in new
chr19	16132570	16139821	chr19:16132570-16139821	1	-	16132570	16132570	8553170	2	940,87,	0,7164,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	16134027	16158570	chr19:16134027-16158570	3	+	16148750	16157794	0	8	208,153,143,152,90,166,93,1361,	0,7913,9604,14696,18524,19015,20371,23182,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	16143684	16154863	chr19:16143684-16154863	0	+	16148750	16152645	789624	4	90,152,657,465,	0,5039,8867,10714,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	16143684	16158575	chr19:16143684-16158575	1	+	16148750	16157794	0	6	90,152,90,166,93,1366,	0,5039,8867,9358,10714,13525,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	16143690	16158564	chr19:16143690-16158564	0	+	16148750	16151531	789624	6	84,152,132,657,93,1355,	0,5033,7756,8861,10708,13519,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	16143694	16155661	chr19:16143694-16155661	0	+	16143694	16143694	8553170	5	80,132,657,93,20,	0,7752,8857,10704,11947,
#Partially deleted in new
chr19	16143714	16158148	chr19:16143714-16158148	0	+	16148750	16153074	789624	6	60,152,90,177,90,939,	0,5009,8837,9317,10687,13495,
#Partially deleted in new
chr19	16143735	16157329	chr19:16143735-16157329	0	+	16148750	16157329	789624	6	39,77,90,166,93,120,	0,4988,8816,9307,10663,13474,
#Partially deleted in new
chr19	16161367	16173525	chr19:16161367-16173525	3	-	16161464	16173475	789624	6	119,196,148,112,35,101,	0,3350,6769,8262,11794,12057,
#Partially deleted in new
chr19	16161414	16173475	chr19:16161414-16173475	1	-	16161464	16173475	789624	4	72,196,148,51,	0,3303,6722,12010,
#Partially deleted in new
chr19	16161414	16173475	chr19:16161414-16173475	0	-	16161414	16161414	8553170	4	72,196,35,51,	0,3303,11747,12010,
#Partially deleted in new
chr19	16161414	16173475	chr19:16161414-16173475	0	-	16169670	16173475	789624	6	72,196,148,93,35,51,	0,3303,6722,8215,11747,12010,
#Partially deleted in new
chr19	16185379	16191614	chr19:16185379-16191614	1	+	16185609	16190955	789624	3	386,54,728,	0,5140,5507,
#Partially deleted in new
chr19	16185417	16192046	chr19:16185417-16192046	3	+	16185442	16190955	789624	4	99,142,54,1160,	0,206,5102,5469,
#Partially deleted in new
chr19	16185422	16191448	chr19:16185422-16191448	1	+	16185442	16190955	789624	3	94,142,562,	0,201,5464,
#Partially deleted in new
chr19	16185432	16191378	chr19:16185432-16191378	0	+	16185442	16189495	789624	5	84,142,124,54,492,	0,191,3955,5087,5454,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	16185454	16186649	chr19:16185454-16186649	0	+	16185454	16186497	789624	3	62,142,197,	0,169,998,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	16186275	16189458	chr19:16186275-16189458	3	-	16186275	16186275	8553170	2	441,137,	0,3046,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	16187312	16187566	chr19:16187312-16187566	3	+	16187312	16187312	8553170	1	254,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	16197577	16245907	chr19:16197577-16245907	3	+	16198026	16234435	789624	12	491,157,68,131,148,127,143,72,159,126,76,11495,	0,5881,8763,10441,11452,28843,29970,30559,31192,35915,36621,36835,
#Partially deleted in new
chr19	16197853	16209041	chr19:16197853-16209041	0	+	16198026	16209041	789624	6	120,58,157,68,131,12,	0,157,5605,8487,10165,11176,
#Partially deleted in new
chr19	16197853	16234911	chr19:16197853-16234911	1	+	16198026	16234435	789624	10	224,131,148,127,143,72,159,126,76,499,	0,10165,11176,28567,29694,30283,30916,35639,36345,36559,
#Partially deleted in new
chr19	16197910	16234784	chr19:16197910-16234784	1	+	16198026	16234435	789624	11	158,157,68,131,148,127,143,72,126,76,372,	0,5548,8430,10108,11119,28510,29637,30226,35582,36288,36502,
#Partially deleted in new
chr19	16197912	16208262	chr19:16197912-16208262	0	+	16197912	16197912	8553170	4	156,157,68,244,	0,5546,8428,10106,
#Partially deleted in new
chr19	16197933	16235345	chr19:16197933-16235345	1	+	16198026	16234435	789624	13	135,157,68,131,148,36,127,143,72,159,126,76,933,	0,5525,8407,10085,11096,12426,28487,29614,30203,30836,35559,36265,36479,
#Partially deleted in new
chr19	16197970	16208144	chr19:16197970-16208144	0	+	16203494	16208144	789624	5	98,113,157,68,126,	0,5018,5488,8370,10048,
#Partially deleted in new
chr19	16198142	16206411	chr19:16198142-16206411	0	+	16203494	16206411	789624	4	166,155,157,71,	0,4804,5316,8198,
#Partially deleted in new
chr19	16198156	16209085	chr19:16198156-16209085	0	+	16203494	16209085	789624	5	152,157,68,131,56,	0,5302,8184,9862,10873,
#Partially deleted in new
chr19	16203462	16206494	chr19:16203462-16206494	0	+	16203462	16203462	8553170	2	153,154,	0,2878,
#Partially deleted in new
chr19	16203605	16209256	chr19:16203605-16209256	0	+	16203605	16209207	789624	4	10,68,131,227,	0,2735,4413,5424,
#Partially deleted in new
chr19	16208849	16227634	chr19:16208849-16227634	0	+	16208849	16208849	8553170	3	328,127,87,	0,17571,18698,
#Partially deleted in new
chr19	16208958	16226746	chr19:16208958-16226746	0	+	16208958	16208958	8553170	2	219,326,	0,17462,
#Partially deleted in new
chr19	16227604	16235345	chr19:16227604-16235345	0	+	16227604	16235233	789624	5	86,72,159,126,199,	0,532,1165,5888,7542,
#Deleted in new
chr19	16234043	16234764	chr19:16234043-16234764	0	+	16234043	16234043	8553170	2	231,352,	0,369,
#Partially deleted in new
chr19	16283358	16324514	chr19:16283358-16324514	0	-	16283358	16283358	8553170	2	363,208,	0,40948,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	16283360	16293575	chr19:16283360-16293575	3	-	16283360	16283360	8553170	3	361,140,92,	0,9470,10123,
#Partially deleted in new
chr19	16324816	16327874	chr19:16324816-16327874	3	+	16324923	16327031	789624	3	182,817,1019,	0,399,2039,
#Partially deleted in new
chr19	16324839	16327260	chr19:16324839-16327260	1	+	16324923	16327017	789624	2	159,405,	0,2016,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	16352461	16353182	chr19:16352461-16353182	3	-	16352461	16352461	8553170	1	721,	0,
#Partially deleted in new
chr19	16355238	16472012	chr19:16355238-16472012	3	-	16355704	16471945	789624	24	613,206,133,83,61,137,51,124,165,198,162,73,86,157,158,234,60,126,63,96,48,90,42,100,	0,6540,21883,29890,30932,37065,38712,40105,47082,48494,49349,58534,62313,62709,66080,69844,73463,79126,81698,82531,85623,86653,86939,116674,
#Partially deleted in new
chr19	16355238	16361953	chr19:16355238-16361953	0	-	16355704	16361953	789624	2	613,68,	0,6647,
#Partially deleted in new
chr19	16355238	16471961	chr19:16355238-16471961	0	-	16361966	16471945	789624	23	613,206,83,61,137,51,124,165,198,162,73,86,157,158,234,60,126,63,96,48,90,42,49,	0,6540,29890,30932,37065,38712,40105,47082,48494,49349,58534,62313,62709,66080,69844,73463,79126,81698,82531,85623,86653,86939,116674,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	16356328	16358327	chr19:16356328-16358327	3	-	16356328	16356328	8553170	1	1999,	0,
#Partially deleted in new
chr19	16361578	16471970	chr19:16361578-16471970	0	-	16437815	16471945	789624	23	406,133,83,61,137,51,124,165,198,162,73,86,157,158,234,60,126,63,96,25,90,42,58,	0,15543,23550,24592,30725,32372,33765,40742,42154,43009,52194,55973,56369,59740,63504,67123,72786,75358,76191,79306,80313,80599,110334,
#Partially deleted in new
chr19	16361580	16472085	chr19:16361580-16472085	1	-	16361769	16471945	789624	23	404,133,83,61,137,51,124,165,198,162,73,86,157,158,234,60,126,63,96,48,90,42,173,	0,15541,23548,24590,30723,32370,33763,40740,42152,43007,52192,55971,56367,59738,63502,67121,72784,75356,76189,79281,80311,80597,110332,
#Partially deleted in new
chr19	16361596	16471976	chr19:16361596-16471976	1	-	16361966	16471945	789624	22	388,83,61,137,51,124,165,198,162,73,86,157,158,234,60,126,63,96,48,90,42,64,	0,23532,24574,30707,32354,33747,40724,42136,42991,52176,55955,56351,59722,63486,67105,72768,75340,76173,79265,80295,80581,110316,
#Partially deleted in new
chr19	16361888	16472085	chr19:16361888-16472085	1	-	16361966	16471945	789624	22	96,83,61,137,51,124,171,198,162,73,86,157,158,234,60,126,63,96,48,90,42,173,	0,23240,24282,30415,32062,33455,40426,41844,42699,51884,55663,56059,59430,63194,66813,72476,75048,75881,78973,80003,80289,110024,
#Partially deleted in new
chr19	16382988	16403745	chr19:16382988-16403745	0	-	16384269	16403745	789624	8	1287,83,61,137,51,124,165,13,	0,2140,3182,9315,10962,12355,19332,20744,
#Partially deleted in new
chr19	16400630	16471950	chr19:16400630-16471950	1	-	16402305	16471945	789624	16	1855,198,162,73,86,157,158,234,60,126,63,96,48,90,42,38,	0,3102,3957,13142,16921,17317,20688,24452,28071,33734,36306,37139,40231,41261,41547,71282,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	16400630	16435296	chr19:16400630-16435296	1	-	16402305	16434400	789624	10	1855,198,162,73,86,157,158,234,60,932,	0,3102,3957,13142,16921,17317,20688,24452,28071,33734,
#Partially deleted in new
chr19	16412683	16413576	chr19:16412683-16413576	7	+	16412683	16412683	16724991	1	893,	0,
#Partially deleted in new
chr19	16417438	16421433	chr19:16417438-16421433	0	-	16417438	16417438	8553170	3	199,157,115,	0,509,3880,
#Partially deleted in new
chr19	16425091	16471959	chr19:16425091-16471959	0	-	16434396	16471945	789624	6	225,60,119,90,42,47,	0,3610,9273,16800,17086,46821,
#Partially deleted in new
chr19	16428701	16471951	chr19:16428701-16471951	0	-	16437040	16471945	789624	8	60,126,128,96,48,90,42,39,	0,5663,8235,9068,12160,13190,13476,43211,
#Partially deleted in new
chr19	16436595	16471975	chr19:16436595-16471975	0	-	16436595	16436595	8553170	6	404,96,48,90,42,63,	0,1174,4266,5296,5582,35317,
#Partially deleted in new
chr19	16440652	16471943	chr19:16440652-16471943	0	-	16440801	16471943	789624	4	257,90,42,31,	0,1239,1525,31260,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	16441510	16471966	chr19:16441510-16471966	0	-	16441510	16441510	8553170	3	471,42,54,	0,667,30402,
#Partially deleted in new
chr19	16479056	16496192	chr19:16479056-16496192	3	-	16479130	16496129	789624	9	218,93,132,108,186,95,204,102,154,	0,1557,3393,3621,4873,6106,11310,16694,16982,
#Partially deleted in new
chr19	16479066	16628204	chr19:16479066-16628204	3	-	16566584	16627943	789624	12	208,93,132,108,102,186,140,126,1040,75,24,333,	0,1547,3383,3611,16684,40100,74703,87465,97576,99268,118363,148805,
#Partially deleted in new
chr19	16482453	16484113	chr19:16482453-16484113	0	-	16482453	16482453	8553170	3	128,108,352,	0,224,1308,
#Partially deleted in new
chr19	16483968	16496119	chr19:16483968-16496119	0	-	16483968	16496119	789624	4	147,95,102,81,	0,1194,11782,12070,
#Partially deleted in new
chr19	16496310	16521350	chr19:16496310-16521350	3	+	16500792	16517301	789624	9	155,760,316,74,490,96,167,112,1257,	0,4481,6754,10390,13188,16703,18186,20919,23783,
#Partially deleted in new
chr19	16496393	16518619	chr19:16496393-16518619	1	+	16500792	16517301	789624	8	72,760,316,74,490,167,112,618,	0,4398,6671,10307,13105,18103,20836,21608,
#Partially deleted in new
chr19	16496405	16509675	chr19:16496405-16509675	0	+	16500792	16506712	789624	4	60,760,74,177,	0,4386,10295,13093,
#Partially deleted in new
chr19	16496438	16521352	chr19:16496438-16521352	0	+	16500792	16517237	789624	9	27,760,316,74,490,96,114,112,1259,	0,4353,6626,10262,13060,16575,18111,20791,23655,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	16496455	16500976	chr19:16496455-16500976	0	+	16500792	16500976	789624	3	237,147,185,	0,3018,4336,
#Partially deleted in new
chr19	16496462	16501126	chr19:16496462-16501126	0	+	16500792	16501126	789624	2	230,335,	0,4329,
#Partially deleted in new
chr19	16513032	16520516	chr19:16513032-16520516	0	+	16513032	16517260	789624	3	77,112,423,	0,4197,7061,
#Partially deleted in new
chr19	16513068	16518120	chr19:16513068-16518120	0	+	16513068	16517301	789624	4	41,167,112,119,	0,1428,4161,4933,
#Partially deleted in new
chr19	16517888	16542530	chr19:16517888-16542530	3	-	16519158	16542378	789624	17	1464,95,117,144,87,134,239,436,176,253,90,112,152,138,185,174,177,	0,1732,2260,2475,2937,3632,5163,7353,10191,11759,12696,12880,14709,15122,17563,23981,24465,
#Partially deleted in new
chr19	16517895	16542415	chr19:16517895-16542415	1	-	16519158	16542378	789624	17	1457,95,117,144,87,134,239,436,176,253,90,145,152,138,185,174,62,	0,1725,2253,2468,2930,3625,5156,7346,10184,11752,12689,12873,14702,15115,17556,23974,24458,
#Deleted in new
chr19	16518883	16519825	chr19:16518883-16519825	0	-	16518883	16518883	8553170	2	469,205,	0,737,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	16518956	16526274	chr19:16518956-16526274	0	-	16518956	16518956	8553170	9	396,95,117,144,87,134,239,436,107,	0,664,1192,1407,1869,2564,4095,6285,7211,
#Deleted in new
chr19	16519903	16520873	chr19:16519903-16520873	0	-	16519903	16519903	8553170	3	362,144,48,	0,460,922,
#Partially deleted in new
chr19	16531983	16542209	chr19:16531983-16542209	0	-	16531983	16531983	8553170	4	766,138,185,340,	0,1027,3468,9886,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	16539687	16539984	chr19:16539687-16539984	3	-	16539687	16539687	8553170	1	297,	0,
#Deleted in new
chr19	16541204	16542400	chr19:16541204-16542400	0	-	16541204	16541204	8553170	2	839,47,	0,1149,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	16542745	16544814	chr19:16542745-16544814	3	+	16542745	16542745	8553170	1	2069,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	16549830	16552333	chr19:16549830-16552333	0	-	16549830	16549830	8553170	2	640,284,	0,2219,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	16549830	16572382	chr19:16549830-16572382	3	-	16553678	16572364	789624	6	4079,246,126,138,71,439,	0,5321,16701,18201,21681,22113,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	16550849	16571536	chr19:16550849-16571536	0	-	16565105	16571536	789624	6	3060,246,96,126,138,25,	0,4302,14187,15682,17182,20662,
#Partially deleted in new
chr19	16553370	16572304	chr19:16553370-16572304	0	-	16553678	16572304	789624	5	539,246,126,71,361,	0,1781,13161,18141,18573,
#Partially deleted in new
chr19	16553388	16564255	chr19:16553388-16564255	0	-	16553388	16553388	8553170	3	521,246,102,	0,1763,10765,
#Partially deleted in new
chr19	16553816	16557135	chr19:16553816-16557135	0	-	16553816	16556931	789624	3	93,246,213,	0,1335,3106,
#Partially deleted in new
chr19	16553848	16555601	chr19:16553848-16555601	0	-	16553848	16553848	8553170	2	61,450,	0,1303,
#Partially deleted in new
chr19	16555348	16566591	chr19:16555348-16566591	0	-	16555348	16555348	8553170	2	492,60,	0,11183,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	16565227	16572209	chr19:16565227-16572209	0	-	16565227	16565227	8553170	4	1430,138,71,266,	0,2804,6284,6716,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	16572623	16575340	chr19:16572623-16575340	3	+	16572623	16572623	8553170	1	2717,	0,
#Partially deleted in new
chr19	16574906	16578777	chr19:16574906-16578777	0	-	16574906	16574906	8553170	1	3871,	0,
#Partially deleted in new
chr19	16574918	16628206	chr19:16574918-16628206	3	-	16576026	16627943	0	3	2764,75,335,	0,3416,52953,
#Partially deleted in new
chr19	16576029	16627943	chr19:16576029-16627943	1	-	16577194	16627943	0	4	1219,78,75,72,	0,1575,2305,51842,
#Partially deleted in new
chr19	16577416	16587601	chr19:16577416-16587601	0	-	16577416	16578400	789624	3	266,75,198,	0,918,9987,
#Partially deleted in new
chr19	16577556	16629062	chr19:16577556-16629062	0	-	16577556	16628959	789624	3	126,75,541,	0,778,50965,
#Partially deleted in new
chr19	16577584	16624661	chr19:16577584-16624661	0	-	16577584	16578400	789624	3	98,75,385,	0,750,46692,
#Partially deleted in new
chr19	16577641	16660104	chr19:16577641-16660104	0	-	16577641	16577641	8553170	7	41,75,142,91,53,46,20,	0,693,69478,76393,81753,82313,82443,
#Partially deleted in new
chr19	16577648	16660000	chr19:16577648-16660000	0	-	16647245	16659990	789624	6	34,75,142,91,53,42,	0,686,69471,76386,81746,82310,
#Partially deleted in new
chr19	16577649	16660104	chr19:16577649-16660104	2	-	16647245	16660104	789624	8	33,75,92,142,91,53,42,20,	0,685,52818,69470,76385,81745,82309,82435,
#Partially deleted in new
chr19	16577649	16660115	chr19:16577649-16660115	0	-	16647232	16660110	789624	6	33,75,166,53,42,31,	0,685,69446,81745,82309,82435,
#Partially deleted in new
chr19	16577650	16660104	chr19:16577650-16660104	0	-	16578335	16660104	789624	5	32,75,53,42,20,	0,684,81744,82308,82434,
#Partially deleted in new
chr19	16577650	16660104	chr19:16577650-16660104	0	-	16647245	16660104	789624	7	32,75,166,91,53,42,20,	0,684,69445,76384,81744,82308,82434,
#Partially deleted in new
chr19	16577745	16660115	chr19:16577745-16660115	1	-	16647232	16660110	789624	5	664,166,53,42,31,	0,69350,81649,82213,82339,
#Partially deleted in new
chr19	16578233	16628173	chr19:16578233-16628173	0	-	16578233	16627943	789624	2	176,302,	0,49638,
#Deleted in new
chr19	16586904	16587985	chr19:16586904-16587985	3	-	16586904	16586904	8553170	1	1081,	0,
#Deleted in new
chr19	16586904	16589409	chr19:16586904-16589409	3	+	16586904	16586904	8553170	1	2505,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	16610373	16612203	chr19:16610373-16612203	3	-	16610373	16610373	8553170	1	1830,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	16610410	16636531	chr19:16610410-16636531	3	+	16610410	16610410	8553170	2	27,349,	0,25772,
#Partially deleted in new
chr19	16630742	16638950	chr19:16630742-16638950	3	+	16630742	16630742	8553170	2	366,87,	0,8121,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	16630750	16660130	chr19:16630750-16660130	0	-	16647232	16660110	789624	5	974,166,53,42,46,	0,16345,28644,29208,29334,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	16630750	16631487	chr19:16630750-16631487	0	-	16630750	16630750	8553170	2	442,179,	0,558,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	16630751	16643942	chr19:16630751-16643942	0	+	16630751	16630751	8553170	2	402,35,	0,13156,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	16630996	16660130	chr19:16630996-16660130	0	-	16647245	16660110	789624	6	728,166,91,53,42,46,	0,16099,23038,28398,28962,29088,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	16631042	16660066	chr19:16631042-16660066	0	-	16647245	16659990	789624	5	682,142,91,53,108,	0,16077,22992,28352,28916,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	16631123	16660130	chr19:16631123-16660130	0	-	16647245	16660110	789624	6	601,142,91,53,42,46,	0,15996,22911,28271,28835,28961,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	16631376	16660138	chr19:16631376-16660138	0	-	16647232	16660110	789624	5	288,166,53,42,54,	0,15719,28018,28582,28708,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	16633796	16635269	chr19:16633796-16635269	3	-	16633796	16633796	8553170	1	1473,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	16639966	16640668	chr19:16639966-16640668	3	-	16639966	16639966	8553170	2	200,346,	0,356,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	16640914	16660114	chr19:16640914-16660114	0	-	16647245	16660110	789624	6	542,999,91,53,42,30,	0,5348,13120,18480,19044,19170,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	16644744	16660157	chr19:16644744-16660157	3	-	16647245	16660110	789624	5	2517,91,53,42,73,	0,9290,14650,15214,15340,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	16645660	16660130	chr19:16645660-16660130	0	-	16652861	16660110	789624	6	1601,357,91,53,42,46,	0,6944,8374,13734,14298,14424,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	16645679	16660130	chr19:16645679-16660130	1	-	16652861	16660110	789624	6	1582,357,91,53,42,46,	0,6925,8355,13715,14279,14405,
#Partially deleted in new
chr19	16646147	16660144	chr19:16646147-16660144	0	-	16647245	16660110	789624	6	653,166,91,53,42,60,	0,948,7887,13247,13811,13937,
#Partially deleted in new
chr19	16646341	16660144	chr19:16646341-16660144	1	-	16647232	16660110	789624	4	920,53,42,60,	0,13053,13617,13743,
#Partially deleted in new
chr19	16646363	16660442	chr19:16646363-16660442	0	-	16647245	16660110	789624	6	437,142,91,53,42,358,	0,756,7671,13031,13595,13721,
#Partially deleted in new
chr19	16646452	16659814	chr19:16646452-16659814	0	-	16646452	16646452	8553170	4	809,91,53,169,	0,7582,12942,13193,
#Partially deleted in new
chr19	16646587	16660144	chr19:16646587-16660144	0	-	16647232	16660110	789624	5	213,166,53,42,60,	0,508,12807,13371,13497,
#Partially deleted in new
chr19	16646658	16660086	chr19:16646658-16660086	0	-	16647245	16659990	789624	5	142,166,91,53,128,	0,437,7376,12736,13300,
#Partially deleted in new
chr19	16647006	16660114	chr19:16647006-16660114	0	-	16655345	16660110	789624	6	255,91,131,53,42,30,	0,7028,8231,12388,12952,13078,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	16652355	16660142	chr19:16652355-16660142	1	-	16652861	16660110	789624	5	606,91,53,42,58,	0,1679,7039,7603,7729,
#Partially deleted in new
chr19	16652697	16660117	chr19:16652697-16660117	0	-	16652697	16652697	8553170	4	264,91,42,33,	0,1337,7261,7387,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	16653679	16660144	chr19:16653679-16660144	0	-	16653679	16653679	8553170	4	446,53,42,60,	0,5715,6279,6405,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	16661126	16690029	chr19:16661126-16690029	3	+	16661217	16688371	789624	6	215,157,185,88,118,1886,	0,18857,19270,21294,25161,27017,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	16661241	16680937	chr19:16661241-16680937	0	+	16661241	16661241	8553170	3	100,157,541,	0,18742,19155,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	16661260	16689006	chr19:16661260-16689006	0	+	16661260	16688943	789624	4	81,157,88,84,	0,18723,19136,27662,
#Partially deleted in new
chr19	16712316	16712434	chr19:16712316-16712434	7	+	16712316	16712316	16724991	1	118,	0,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr19	16719975	16817953	chr19:16719975-16817953	0	+	16731197	16744762	789624	21	318,223,98,87,117,727,1273,204,160,118,159,198,123,209,273,91,155,277,551,106,2926,	0,1419,4390,11216,16658,24445,29163,39249,42003,43852,45058,53150,59367,69006,71374,74487,77756,79910,87610,92769,95052,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr19	16719979	16817963	chr19:16719979-16817963	3	+	16731197	16815039	789624	19	314,98,87,117,298,1273,204,160,118,159,198,123,209,273,91,155,277,551,2936,	0,4386,11212,16654,24441,29159,39245,41999,43848,45054,53146,59363,69002,71370,74483,77752,79906,87606,95048,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr19	16720048	16817123	chr19:16720048-16817123	1	+	16731197	16815329	789624	19	245,87,117,298,1273,204,160,118,159,198,123,209,273,91,155,151,551,106,2096,	0,11143,16585,24372,29090,39176,41930,43779,44985,53077,59294,68933,71301,74414,77683,79963,87537,92696,94979,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr19	16727253	16817963	chr19:16727253-16817963	0	+	16727555	16731277	789624	18	420,87,117,298,1273,204,160,118,159,198,123,209,273,91,155,277,551,2936,	0,3938,9380,17167,21885,31971,34725,36574,37780,45872,52089,61728,64096,67209,70478,72632,80332,87774,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr19	16731166	16817963	chr19:16731166-16817963	1	+	16731197	16815039	789624	17	112,117,298,1273,204,160,118,159,198,123,209,273,91,155,277,551,2936,	0,5467,13254,17972,28058,30812,32661,33867,41959,48176,57815,60183,63296,66565,68719,76419,83861,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr19	16731194	16816726	chr19:16731194-16816726	0	+	16731197	16738258	789624	19	84,117,67,298,1273,204,160,118,159,198,123,209,273,91,155,277,551,106,1699,	0,5439,7031,13226,17944,28030,30784,32633,33839,41931,48148,57787,60155,63268,66537,68691,76391,81550,83833,
#Duplicated in new
chr19	16731197	16817598	chr19:16731197-16817598	1	+	16731197	16815329	789624	18	81,117,298,1273,204,160,118,159,198,123,209,273,91,155,277,551,106,2571,	0,5436,13223,17941,28027,30781,32630,33836,41928,48145,57784,60152,63265,66534,68688,76388,81547,83830,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	16801425	16801714	chr19:16801425-16801714	3	+	16801425	16801425	8553170	2	35,186,	0,103,
#Partially deleted in new
chr19	16829399	16880350	chr19:16829399-16880350	1	+	16829420	16878727	789624	19	141,107,154,201,144,123,90,119,208,117,239,184,616,170,174,93,95,208,1854,	0,391,2094,12368,17570,22012,23669,24743,32952,34280,36010,36973,40060,41829,46655,47086,48145,48783,49097,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr19	16829406	16880353	chr19:16829406-16880353	3	+	16829420	16878727	789624	20	134,107,154,201,144,123,90,119,208,96,117,239,184,616,170,174,93,95,208,1857,	0,384,2087,12361,17563,22005,23662,24736,32945,33477,34273,36003,36966,40053,41822,46648,47079,48138,48776,49090,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	16829406	16855745	chr19:16829406-16855745	1	+	16829420	16854265	789624	8	134,107,154,201,144,123,90,1603,	0,384,2087,12361,17563,22005,23662,24736,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	16841951	16863286	chr19:16841951-16863286	0	+	16841951	16863111	789624	7	17,144,123,90,119,208,403,	0,5018,9460,11117,12191,20400,20932,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	16844024	16846473	chr19:16844024-16846473	3	+	16844024	16844024	8553170	2	187,184,	0,2265,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	16863096	16865590	chr19:16863096-16865590	0	+	16863096	16863096	8553170	3	266,117,181,	0,583,2313,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	16863273	16878961	chr19:16863273-16878961	1	+	16863643	16878727	789624	10	523,239,184,616,170,174,93,95,208,465,	0,2136,3099,6186,7955,12781,13212,14271,14909,15223,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	16865121	16869623	chr19:16865121-16869623	0	+	16865121	16865121	8553170	3	527,184,164,	0,1251,4338,
#Partially deleted in new
chr19	16869968	16871638	chr19:16869968-16871638	0	+	16869968	16869968	8553170	2	107,410,	0,1260,
#Deleted in new
chr19	16875930	16878706	chr19:16875930-16878706	0	+	16875930	16875930	8553170	5	298,93,95,208,210,	0,555,1614,2252,2566,
#Deleted in new
chr19	16876938	16879060	chr19:16876938-16879060	0	+	16876938	16876938	8553170	3	701,208,564,	0,1244,1558,
#Deleted in new
chr19	16877161	16878942	chr19:16877161-16878942	0	+	16877161	16877161	8553170	4	174,95,208,446,	0,383,1021,1335,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	16888859	16892606	chr19:16888859-16892606	3	+	16889189	16890621	0	2	439,3034,	0,713,
#Deleted in new
chr19	16889189	16890080	chr19:16889189-16890080	1	+	16889189	16889809	789624	2	109,504,	0,387,
#Partially deleted in new
chr19	16892946	17026815	chr19:16892946-17026815	3	-	16893107	17026783	789624	42	393,151,210,111,106,75,88,215,63,156,137,87,166,75,157,82,177,226,299,52,131,154,232,63,143,162,150,173,190,129,171,228,109,85,114,55,18,53,166,23,152,265,	0,3229,3509,4744,4942,6528,8263,9702,10614,10755,11279,11519,14005,21477,21710,28958,32249,35062,35995,45448,52602,54127,59022,64906,77944,82150,83055,84421,87550,96696,100469,104164,107467,109319,111326,115558,116356,118517,118645,127384,129083,133604,
#Partially deleted in new
chr19	16892950	16903598	chr19:16892950-16903598	0	-	16894415	16903598	789624	9	1487,151,210,111,106,75,88,215,38,	0,3225,3505,4740,4938,6524,8259,9698,10610,
#Partially deleted in new
chr19	16892951	17026815	chr19:16892951-17026815	1	-	16970959	17026642	789624	38	388,151,210,111,106,75,88,215,63,156,137,87,166,75,157,82,177,226,299,52,131,154,232,63,143,172,171,228,109,85,114,55,18,53,166,23,152,265,	0,3224,3504,4739,4937,6523,8258,9697,10609,10750,11274,11514,14000,21472,21705,28953,32244,35057,35990,45443,52597,54122,59017,64901,77939,82135,100464,104159,107462,109314,111321,115553,116351,118512,118640,127379,129078,133599,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	16892953	16896973	chr19:16892953-16896973	0	-	16892953	16892953	8553170	2	3373,113,	0,3907,
#Partially deleted in new
chr19	16892957	16896941	chr19:16892957-16896941	0	-	16892957	16892957	8553170	3	1480,151,486,	0,3218,3498,
#Partially deleted in new
chr19	16893738	16896973	chr19:16893738-16896973	0	-	16893738	16893738	8553170	4	699,151,210,113,	0,2437,2717,3122,
#Partially deleted in new
chr19	16893807	16896973	chr19:16893807-16896973	0	-	16893807	16893807	8553170	3	630,151,113,	0,2368,3053,
#Partially deleted in new
chr19	16893843	16896923	chr19:16893843-16896923	0	-	16893843	16893843	8553170	4	594,77,210,63,	0,2332,2612,3017,
#Partially deleted in new
chr19	16894007	16896215	chr19:16894007-16896215	0	-	16894302	16896215	789624	2	426,40,	0,2168,
#Partially deleted in new
chr19	16894082	16897889	chr19:16894082-16897889	0	-	16894082	16894082	8553170	3	355,151,199,	0,2093,3608,
#Partially deleted in new
chr19	16894352	16898108	chr19:16894352-16898108	0	-	16894352	16894352	8553170	4	85,151,111,220,	0,1823,3338,3536,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	16895864	16896973	chr19:16895864-16896973	0	-	16895864	16895864	8553170	2	462,113,	0,996,
#Deleted in new
chr19	16896038	16896944	chr19:16896038-16896944	0	-	16896038	16896038	8553170	3	288,210,84,	0,417,822,
#Deleted in new
chr19	16896195	16896893	chr19:16896195-16896893	0	-	16896195	16896195	8553170	2	126,438,	0,260,
#Partially deleted in new
chr19	16896228	16899549	chr19:16896228-16899549	0	-	16896228	16899549	789624	5	24,210,111,106,75,	0,227,1462,1660,3246,
#Deleted in new
chr19	16896472	16897392	chr19:16896472-16897392	0	-	16896472	16896472	8553170	2	193,66,	0,854,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	16907461	16907723	chr19:16907461-16907723	3	+	16907461	16907461	8553170	1	262,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	16910489	16910784	chr19:16910489-16910784	3	-	16910489	16910489	8553170	1	295,	0,
#Partially deleted in new
chr19	16947081	16976068	chr19:16947081-16976068	0	-	16947081	16947081	8553170	5	146,63,143,162,67,	0,10771,23809,28015,28920,
#Partially deleted in new
chr19	16951988	16971125	chr19:16951988-16971125	0	-	16951988	16951988	8553170	3	212,63,235,	0,5864,18902,
#Partially deleted in new
chr19	16957546	17026815	chr19:16957546-17026815	0	-	16970959	17026783	789624	15	369,143,172,171,228,109,85,114,55,18,53,166,23,152,265,	0,13344,17540,35869,39564,42867,44719,46726,50958,51756,53917,54045,62784,64483,69004,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	17000205	17002530	chr19:17000205-17002530	0	-	17000205	17000205	8553170	2	317,265,	0,2060,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	17009188	17013460	chr19:17009188-17013460	3	+	17009188	17009188	8553170	2	315,90,	0,4182,
#Partially deleted in new
chr19	17049728	17075613	chr19:17049728-17075613	3	-	17049872	17075422	789624	11	448,142,142,159,66,95,96,82,56,62,220,	0,3096,6132,8820,9082,9828,10268,12969,19302,23545,25665,
#Partially deleted in new
chr19	17049760	17075625	chr19:17049760-17075625	1	-	17049872	17075422	789624	11	416,142,142,159,66,95,93,82,56,62,232,	0,3064,6100,8788,9050,9796,10236,12937,19270,23513,25633,
#Partially deleted in new
chr19	17049760	17053083	chr19:17049760-17053083	0	-	17049760	17049760	8553170	2	416,259,	0,3064,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	17049765	17075200	chr19:17049765-17075200	1	-	17049872	17062743	789624	10	411,142,142,159,66,95,96,82,56,1927,	0,3059,6095,8783,9045,9791,10231,12932,19265,23508,
#Partially deleted in new
chr19	17050063	17075422	chr19:17050063-17075422	0	-	17069070	17075422	789624	11	113,142,142,159,66,95,96,82,69,62,29,	0,2761,5797,8485,8747,9493,9933,12634,18967,23210,25330,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	17051682	17053719	chr19:17051682-17053719	0	-	17051682	17051682	8553170	1	2037,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	17051993	17055087	chr19:17051993-17055087	3	+	17051993	17051993	8553170	2	237,43,	0,3051,
#Partially deleted in new
chr19	17052867	17075444	chr19:17052867-17075444	0	-	17059618	17075422	789624	9	99,142,159,66,95,96,56,62,51,	0,2993,5681,5943,6689,7129,16163,20406,22526,
#Partially deleted in new
chr19	17055830	17060242	chr19:17055830-17060242	0	-	17055830	17055830	8553170	5	172,159,66,95,246,	0,2718,2980,3726,4166,
#Partially deleted in new
chr19	17075780	17213295	chr19:17075780-17213295	3	+	17101717	17211785	789624	40	94,898,95,63,100,101,130,90,117,135,122,142,205,79,114,40,123,81,111,123,317,918,67,125,134,191,99,174,42,112,74,193,129,106,132,124,48,134,140,1401,	0,25879,69616,76863,78186,78534,81128,83614,86569,87207,92162,96555,96978,99882,105146,108048,109084,110140,112154,115316,116965,118775,122011,122403,124512,124858,126145,126349,127061,127366,129482,130179,130467,130898,131332,133805,134552,134934,135866,136114,
#Partially deleted in new
chr19	17075785	17213284	chr19:17075785-17213284	1	+	17101717	17212310	789624	40	89,898,95,63,100,101,130,90,117,135,122,142,205,79,114,40,123,81,111,123,317,918,67,125,134,191,99,174,42,112,74,193,129,106,132,124,48,138,124,1390,	0,25874,69611,76858,78181,78529,81123,83609,86564,87202,92157,96550,96973,99877,105141,108043,109079,110135,112149,115311,116960,118770,122006,122398,124507,124853,126140,126344,127056,127361,129477,130174,130462,130893,131327,133800,134547,134929,135865,136109,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	17095417	17099307	chr19:17095417-17099307	3	-	17095417	17095417	8553170	2	465,145,	0,3745,
#Partially deleted in new
chr19	17101655	17213294	chr19:17101655-17213294	1	+	17101717	17211785	789624	39	902,95,63,100,101,130,90,117,135,122,142,205,79,114,40,123,81,111,123,317,918,67,125,134,191,99,174,42,112,74,193,129,106,132,124,48,134,140,1400,	0,43741,50988,52311,52659,55253,57739,60694,61332,66287,70680,71103,74007,79271,82173,83209,84265,86279,89441,91090,92900,96136,96528,98637,98983,100270,100474,101186,101491,103607,104304,104592,105023,105457,107930,108677,109059,109991,110239,
#Partially deleted in new
chr19	17101717	17212099	chr19:17101717-17212099	0	+	17101717	17212099	789624	38	840,95,63,100,101,130,90,117,135,122,142,205,79,114,40,123,81,111,123,317,918,67,125,134,191,99,174,42,112,74,193,129,106,132,124,134,128,205,	0,43679,50926,52249,52597,55191,57677,60632,61270,66225,70618,71041,73945,79209,82111,83147,84203,86217,89379,91028,92838,96074,96466,98575,98921,100208,100412,101124,101429,103545,104242,104530,104961,105395,107868,108997,109929,110177,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	17102181	17103789	chr19:17102181-17103789	0	+	17102181	17102181	8553170	2	376,533,	0,1075,
#Partially deleted in new
chr19	17172374	17184898	chr19:17172374-17184898	0	+	17172374	17184898	789624	5	103,205,79,40,34,	0,384,3288,11454,12490,
#Partially deleted in new
chr19	17172812	17184002	chr19:17172812-17184002	0	+	17172812	17172812	8553170	4	151,79,114,174,	0,2850,8114,11016,
#Partially deleted in new
chr19	17172923	17188005	chr19:17172923-17188005	0	+	17172923	17188005	789624	7	40,79,90,40,123,81,71,	0,2739,4873,10905,11941,12997,15011,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	17177510	17178476	chr19:17177510-17178476	3	-	17177510	17177510	8553170	2	58,67,	0,899,
#Partially deleted in new
chr19	17180644	17187939	chr19:17180644-17187939	0	+	17180644	17180644	8553170	5	396,40,123,81,5,	0,3184,4220,5276,7290,
#Partially deleted in new
chr19	17183736	17184955	chr19:17183736-17184955	0	+	17183736	17183736	8553170	2	132,91,	0,1128,
#Partially deleted in new
chr19	17184510	17186000	chr19:17184510-17186000	0	+	17184510	17184510	8553170	2	477,80,	0,1410,
#Partially deleted in new
chr19	17198117	17206828	chr19:17198117-17206828	0	+	17198117	17198117	8553170	7	191,134,191,99,174,39,150,	0,2175,2521,3808,4012,4727,8561,
#Partially deleted in new
chr19	17202128	17206359	chr19:17202128-17206359	0	+	17202128	17202128	8553170	5	175,417,74,193,112,	0,713,3134,3831,4119,
#Partially deleted in new
chr19	17202869	17206133	chr19:17202869-17206133	0	+	17202869	17203190	789624	4	135,112,74,174,	0,277,2393,3090,
#Partially deleted in new
chr19	17206688	17211744	chr19:17206688-17211744	0	+	17206688	17211744	789624	5	96,132,124,138,94,	0,424,2897,4026,4962,
#Partially deleted in new
chr19	17206773	17213284	chr19:17206773-17213284	0	+	17206773	17211785	789624	6	11,132,124,48,138,1634,	0,339,2812,3559,3941,4877,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	17207137	17208010	chr19:17207137-17208010	3	-	17207137	17207137	8553170	2	234,395,	0,478,
#Partially deleted in new
chr19	17207212	17214537	chr19:17207212-17214537	0	+	17207212	17214518	789624	6	32,124,48,138,124,78,	0,2373,3120,3502,4438,7247,
#Partially deleted in new
chr19	17210442	17211900	chr19:17210442-17211900	0	+	17210442	17210442	8553170	2	410,250,	0,1208,
#Partially deleted in new
chr19	17210590	17211940	chr19:17210590-17211940	0	+	17210590	17210590	8553170	3	262,124,46,	0,1060,1304,
#Partially deleted in new
chr19	17215345	17217617	chr19:17215345-17217617	0	+	17215405	17216006	789624	4	162,79,153,165,	0,646,823,2107,
#Partially deleted in new
chr19	17215358	17219829	chr19:17215358-17219829	3	+	17215405	17219813	789624	8	149,50,79,153,10,28,175,199,	0,443,633,810,2094,3005,3854,4272,
#Partially deleted in new
chr19	17215374	17219829	chr19:17215374-17219829	0	+	17215405	17218372	789624	7	133,50,79,170,20,175,199,	0,427,617,794,2997,3838,4256,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	17215387	17218826	chr19:17215387-17218826	1	+	17215405	17217476	789624	5	120,50,79,153,1374,	0,414,604,781,2065,
#Partially deleted in new
chr19	17215389	17219829	chr19:17215389-17219829	1	+	17215405	17219649	789624	7	118,50,79,153,10,28,199,	0,412,602,779,2063,2974,4241,
#Partially deleted in new
chr19	17215391	17217489	chr19:17215391-17217489	0	+	17215391	17215391	8553170	4	116,269,153,37,	0,410,777,2061,
#Partially deleted in new
chr19	17215397	17219829	chr19:17215397-17219829	1	+	17215405	17219813	789624	7	110,50,79,154,28,175,199,	0,404,594,771,2966,3815,4233,
#Partially deleted in new
chr19	17215397	17219819	chr19:17215397-17219819	0	+	17215405	17216006	789624	7	110,79,153,10,28,175,189,	0,594,771,2055,2966,3815,4233,
#Partially deleted in new
chr19	17215719	17219640	chr19:17215719-17219640	0	+	17215822	17219640	789624	7	132,79,153,10,28,175,10,	0,272,449,1733,2644,3493,3911,
#Partially deleted in new
chr19	17215828	17217670	chr19:17215828-17217670	0	+	17215828	17215828	8553170	3	242,153,218,	0,340,1624,
#Partially deleted in new
chr19	17226203	17229219	chr19:17226203-17229219	3	+	17226247	17228925	789624	6	113,177,206,166,54,417,	0,489,790,1636,2052,2599,
#Partially deleted in new
chr19	17226212	17227199	chr19:17226212-17227199	0	+	17226212	17226212	8553170	3	141,177,206,	0,480,781,
#Partially deleted in new
chr19	17226221	17227943	chr19:17226221-17227943	0	+	17226221	17226221	8553170	4	132,177,225,104,	0,471,753,1618,
#Partially deleted in new
chr19	17226224	17229215	chr19:17226224-17229215	1	+	17226247	17228301	789624	5	92,177,206,54,413,	0,468,769,2031,2578,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	17226225	17229213	chr19:17226225-17229213	0	+	17226225	17226225	8553170	4	91,507,54,833,	0,467,2030,2155,
#Partially deleted in new
chr19	17226242	17229202	chr19:17226242-17229202	0	+	17226242	17226242	8553170	5	74,507,166,54,400,	0,450,1597,2013,2560,
#Partially deleted in new
chr19	17226252	17229219	chr19:17226252-17229219	0	+	17226252	17229074	789624	6	64,177,206,166,54,211,	0,440,741,1587,2003,2756,
#Partially deleted in new
chr19	17226614	17229165	chr19:17226614-17229165	1	+	17226791	17228925	789624	5	255,206,166,54,363,	0,379,1225,1641,2188,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	17226739	17229215	chr19:17226739-17229215	0	+	17226739	17228613	789624	5	130,206,166,54,785,	0,254,1100,1516,1691,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	17226781	17228513	chr19:17226781-17228513	0	+	17226781	17226781	8553170	3	418,166,258,	0,1058,1474,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	17226838	17228705	chr19:17226838-17228705	0	+	17226838	17227856	789624	5	31,206,166,54,295,	0,155,1001,1417,1572,
#Partially deleted in new
chr19	17227042	17229218	chr19:17227042-17229218	0	+	17227042	17228257	789624	3	157,54,210,	0,1213,1966,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	17227157	17228943	chr19:17227157-17228943	0	+	17227157	17227157	8553170	2	42,688,	0,1098,
#Partially deleted in new
chr19	17228253	17229215	chr19:17228253-17229215	0	+	17228253	17229126	789624	3	56,113,207,	0,549,755,
#Partially deleted in new
chr19	17228255	17229215	chr19:17228255-17229215	0	+	17228255	17229074	789624	3	54,24,270,	0,547,690,
#Partially deleted in new
chr19	17231882	17245940	chr19:17231882-17245940	3	-	17232351	17245220	789624	4	744,567,95,998,	0,3616,8788,13060,
#Partially deleted in new
chr19	17235701	17244504	chr19:17235701-17244504	0	-	17235701	17240683	789624	3	364,95,272,	0,4969,8531,
#Partially deleted in new
chr19	17235939	17255448	chr19:17235939-17255448	3	-	17235939	17240683	789624	5	126,95,123,107,64,	0,4731,15642,15971,19445,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	17249175	17264796	chr19:17249175-17264796	3	-	17250224	17264299	789624	13	1239,123,107,222,250,174,141,137,126,439,149,102,126,	0,2406,2735,6209,7295,9036,10113,10420,10721,13376,14826,15070,15495,
#Partially deleted in new
chr19	17250153	17264724	chr19:17250153-17264724	1	-	17250224	17264256	789624	12	261,123,107,222,250,174,141,137,126,439,102,54,	0,1428,1757,5231,6317,8058,9135,9442,9743,12398,14092,14517,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	17250157	17264714	chr19:17250157-17264714	0	-	17263997	17264299	789624	12	257,123,107,222,250,490,141,137,126,1599,102,44,	0,1424,1753,5227,6313,8054,9131,9438,9739,12394,14088,14513,
#Partially deleted in new
chr19	17262583	17264749	chr19:17262583-17264749	0	-	17262583	17262583	8553170	3	407,102,79,	0,1662,2087,
#Partially deleted in new
chr19	17262783	17264753	chr19:17262783-17264753	0	-	17262783	17262783	8553170	4	244,149,102,83,	0,1218,1462,1887,
#Partially deleted in new
chr19	17262828	17264724	chr19:17262828-17264724	0	-	17262828	17264299	789624	4	162,149,102,164,	0,1173,1417,1732,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	17263832	17264737	chr19:17263832-17264737	0	-	17263832	17263832	8553170	3	318,102,67,	0,413,838,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	17263839	17264745	chr19:17263839-17264745	0	-	17263839	17263839	8553170	3	311,102,185,	0,406,721,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	17264106	17282786	chr19:17264106-17282786	0	-	17264106	17264299	789624	4	44,102,152,251,	0,139,10306,18429,
#Partially deleted in new
chr19	17267349	17279337	chr19:17267349-17279337	3	+	17268806	17279048	789624	9	178,298,59,121,79,25,130,87,493,	0,1444,4247,6554,6757,8451,9145,9473,11495,
#Partially deleted in new
chr19	17267375	17279048	chr19:17267375-17279048	1	+	17268806	17279048	789624	6	152,298,59,130,87,204,	0,1418,4221,9119,9447,11469,
#Partially deleted in new
chr19	17267385	17279337	chr19:17267385-17279337	1	+	17268806	17279048	789624	9	142,336,59,121,79,25,130,87,493,	0,1370,4211,6518,6721,8415,9109,9437,11459,
#Partially deleted in new
chr19	17267417	17282966	chr19:17267417-17282966	3	+	17268806	17273945	789624	10	110,298,121,79,25,130,87,148,106,103,	0,1376,6486,6689,8383,9077,9405,14644,15238,15446,
#Partially deleted in new
chr19	17267436	17276525	chr19:17267436-17276525	0	+	17268806	17276525	789624	7	80,336,59,121,79,25,31,	0,1319,4160,6467,6670,8364,9058,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	17267442	17277523	chr19:17267442-17277523	0	+	17267442	17267442	8553170	4	85,298,59,1029,	0,1351,4154,9052,
#Partially deleted in new
chr19	17267442	17274185	chr19:17267442-17274185	0	+	17268806	17274185	789624	5	85,290,59,121,79,	0,1359,4154,6461,6664,
#Partially deleted in new
chr19	17267442	17279337	chr19:17267442-17279337	1	+	17268806	17279048	789624	9	74,298,59,121,79,25,130,87,493,	0,1351,4154,6461,6664,8358,9052,9380,11402,
#Partially deleted in new
chr19	17267456	17274173	chr19:17267456-17274173	0	+	17268806	17271597	789624	6	71,145,50,59,121,67,	0,1337,1585,4140,6447,6650,
#Partially deleted in new
chr19	17267470	17276556	chr19:17267470-17276556	0	+	17268806	17276556	789624	7	57,298,59,121,79,49,62,	0,1323,4126,6433,6636,8306,9024,
#Partially deleted in new
chr19	17267473	17275825	chr19:17267473-17275825	0	+	17268806	17275825	789624	6	54,298,59,121,79,37,	0,1320,4123,6430,6633,8315,
#Partially deleted in new
chr19	17267477	17276555	chr19:17267477-17276555	0	+	17267477	17267477	8553170	5	50,298,59,121,61,	0,1316,4119,6426,9017,
#Partially deleted in new
chr19	17267501	17279172	chr19:17267501-17279172	1	+	17268806	17279048	789624	6	26,336,59,130,87,328,	0,1254,4095,8993,9321,11343,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	17268684	17276602	chr19:17268684-17276602	0	+	17268806	17276602	789624	6	407,59,121,79,25,108,	0,2912,5219,5422,7116,7810,
#Partially deleted in new
chr19	17268996	17279339	chr19:17268996-17279339	0	+	17268996	17279098	789624	4	95,59,77,303,	0,2600,4907,10040,
#Partially deleted in new
chr19	17276427	17278984	chr19:17276427-17278984	0	+	17276427	17276427	8553170	3	197,87,140,	0,395,2417,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	17281644	17287646	chr19:17281644-17287646	3	+	17281758	17286552	789624	9	338,153,106,139,738,178,160,139,1267,	0,412,1011,1219,1580,2444,3786,4036,4735,
#Partially deleted in new
chr19	17281644	17286505	chr19:17281644-17286505	0	+	17281758	17285468	789624	8	338,153,106,139,660,160,139,126,	0,412,1011,1219,1580,3786,4036,4735,
#Deleted in new
chr19	17281662	17282875	chr19:17281662-17282875	0	+	17281662	17281662	8553170	3	547,106,12,	0,993,1201,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	17281698	17287646	chr19:17281698-17287646	0	+	17281758	17282095	789624	9	284,148,106,139,660,178,160,139,1267,	0,363,957,1165,1526,2390,3732,3982,4681,
#Partially deleted in new
chr19	17281698	17286854	chr19:17281698-17286854	1	+	17281758	17286552	789624	9	284,153,106,139,660,178,160,139,475,	0,358,957,1165,1526,2390,3732,3982,4681,
#Partially deleted in new
chr19	17281876	17286854	chr19:17281876-17286854	0	+	17281876	17281876	8553170	8	73,153,347,738,178,160,139,475,	0,180,779,1348,2212,3554,3804,4503,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	17281918	17286922	chr19:17281918-17286922	0	+	17281918	17286715	789624	8	64,153,106,139,660,178,160,543,	0,138,737,945,1306,2170,3512,4461,
#Deleted in new
chr19	17282048	17283048	chr19:17282048-17283048	0	+	17282048	17282048	8553170	2	161,393,	0,607,
#Deleted in new
chr19	17282093	17283177	chr19:17282093-17283177	0	+	17282093	17282093	8553170	3	116,106,314,	0,562,770,
#Partially deleted in new
chr19	17292130	17303473	chr19:17292130-17303473	3	-	17292660	17301616	789624	5	701,217,171,769,232,	0,2157,2544,8725,11111,
#Partially deleted in new
chr19	17292608	17306655	chr19:17292608-17306655	1	+	17292640	17306379	789624	3	246,127,490,	0,13222,13557,
#Partially deleted in new
chr19	17292632	17306543	chr19:17292632-17306543	3	+	17305892	17306379	0	4	222,66,127,378,	0,5679,13198,13533,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	17296195	17296695	chr19:17296195-17296695	3	-	17296195	17296195	8553170	1	500,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	17297744	17298430	chr19:17297744-17298430	0	+	17297744	17297744	8553170	2	215,189,	0,497,
#Partially deleted in new
chr19	17301139	17310236	chr19:17301139-17310236	0	-	17301139	17310206	789624	2	485,70,	0,9027,
#Partially deleted in new
chr19	17301288	17303425	chr19:17301288-17303425	0	-	17301288	17303246	789624	3	336,50,184,	0,894,1953,
#Partially deleted in new
chr19	17302866	17306525	chr19:17302866-17306525	1	+	17305892	17306379	0	3	68,127,360,	0,2964,3299,
#Deleted in new
chr19	17305667	17306843	chr19:17305667-17306843	1	+	17305892	17306379	0	2	290,678,	0,498,
#Deleted in new
chr19	17305871	17306782	chr19:17305871-17306782	1	+	17305892	17306311	789624	2	62,541,	0,370,
#Partially deleted in new
chr19	17309517	17320492	chr19:17309517-17320492	0	+	17309654	17319656	789624	6	140,81,52,62,180,242,	0,4505,4820,6416,10028,10733,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	17309530	17323301	chr19:17309530-17323301	3	+	17309654	17319656	789624	5	127,81,52,62,3756,	0,4492,4807,6403,10015,
#Partially deleted in new
chr19	17309568	17320367	chr19:17309568-17320367	0	+	17309654	17319656	789624	6	89,81,52,62,180,38,	0,4454,4769,6365,9977,10761,
#Partially deleted in new
chr19	17309573	17314732	chr19:17309573-17314732	0	+	17309573	17309573	8553170	3	84,81,395,	0,4449,4764,
#Partially deleted in new
chr19	17315771	17319719	chr19:17315771-17319719	0	+	17315771	17315771	8553170	2	224,174,	0,3774,
#Partially deleted in new
chr19	17323222	17334829	chr19:17323222-17334829	3	-	17323516	17334670	789624	18	662,670,111,132,192,822,75,56,127,153,162,128,117,97,139,133,111,265,	0,1494,4012,4215,4466,4939,6534,6736,6902,7129,7605,7865,8072,9707,9878,10199,10467,11342,
#Partially deleted in new
chr19	17323222	17334737	chr19:17323222-17334737	0	-	17329199	17334670	789624	18	662,670,111,132,192,1380,75,56,127,153,162,128,117,97,139,133,111,173,	0,1494,4012,4215,4466,4939,6534,6736,6902,7129,7605,7865,8072,9707,9878,10199,10467,11342,
#Partially deleted in new
chr19	17329199	17334829	chr19:17329199-17334829	1	-	17329199	17334670	789624	13	342,75,56,127,153,162,128,117,97,139,133,111,265,	0,557,759,925,1152,1628,1888,2095,3730,3901,4222,4490,5365,
#Partially deleted in new
chr19	17333287	17334729	chr19:17333287-17334729	0	-	17333287	17333287	8553170	2	513,165,	0,1277,
#Partially deleted in new
chr19	17334919	17341968	chr19:17334919-17341968	1	+	17335003	17341703	789624	9	203,248,87,203,73,144,166,279,491,	0,3088,3445,3619,4034,4203,4514,6124,6558,
#Partially deleted in new
chr19	17334999	17337260	chr19:17334999-17337260	0	+	17334999	17334999	8553170	2	123,441,	0,1820,
#Partially deleted in new
chr19	17334999	17338675	chr19:17334999-17338675	0	+	17335003	17338386	789624	4	112,248,87,137,	0,3008,3365,3539,
#Deleted in new
chr19	17336685	17337348	chr19:17336685-17337348	0	+	17336685	17336685	8553170	2	42,529,	0,134,
#Deleted in new
chr19	17336691	17338741	chr19:17336691-17338741	0	+	17336691	17336691	8553170	4	466,248,87,203,	0,1316,1673,1847,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	17336723	17342730	chr19:17336723-17342730	0	+	17336723	17336723	8553170	9	853,248,87,203,313,166,216,256,575,	0,1284,1641,1815,2230,2710,4383,4754,5432,
#Deleted in new
chr19	17336727	17337975	chr19:17336727-17337975	0	+	17336727	17336727	8553170	2	430,102,	0,1146,
#Deleted in new
chr19	17336727	17338708	chr19:17336727-17338708	0	+	17336727	17336727	8553170	4	307,248,87,170,	0,1280,1637,1811,
#Deleted in new
chr19	17336872	17338719	chr19:17336872-17338719	0	+	17336872	17336872	8553170	4	162,248,87,181,	0,1135,1492,1666,
#Deleted in new
chr19	17336972	17339015	chr19:17336972-17339015	0	+	17336972	17336972	8553170	5	297,248,87,203,62,	0,1035,1392,1566,1981,
#Deleted in new
chr19	17337516	17338451	chr19:17337516-17338451	0	+	17337516	17337516	8553170	2	148,444,	0,491,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	17337543	17342735	chr19:17337543-17342735	1	+	17337611	17341703	789624	9	121,248,87,203,73,144,166,279,1258,	0,464,821,995,1410,1579,1890,3500,3934,
#Partially deleted in new
chr19	17337554	17342022	chr19:17337554-17342022	3	+	17337611	17341703	789624	8	110,248,87,203,313,166,279,545,	0,453,810,984,1399,1879,3489,3923,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	17337554	17342723	chr19:17337554-17342723	1	+	17337611	17341703	789624	9	110,248,87,203,73,144,166,216,1246,	0,453,810,984,1399,1568,1879,3552,3923,
#Deleted in new
chr19	17337558	17338740	chr19:17337558-17338740	0	+	17337558	17337558	8553170	4	18,248,87,202,	0,449,806,980,
#Deleted in new
chr19	17337558	17339487	chr19:17337558-17339487	0	+	17337558	17337558	8553170	7	106,357,87,203,73,144,54,	0,340,806,980,1395,1564,1875,
#Partially deleted in new
chr19	17337558	17341125	chr19:17337558-17341125	0	+	17337611	17339215	789624	7	106,248,87,33,86,166,82,	0,449,806,980,1622,1875,3485,
#Deleted in new
chr19	17337558	17338682	chr19:17337558-17338682	0	+	17337558	17337558	8553170	3	18,444,144,	0,449,980,
#Deleted in new
chr19	17337570	17338743	chr19:17337570-17338743	0	+	17337611	17338386	789624	4	77,248,87,205,	0,437,794,968,
#Deleted in new
chr19	17337585	17339161	chr19:17337585-17339161	0	+	17337585	17337585	8553170	5	670,87,203,73,39,	0,779,953,1368,1537,
#Deleted in new
chr19	17337587	17339572	chr19:17337587-17339572	0	+	17337611	17337955	789624	7	77,382,87,203,73,144,139,	0,286,777,951,1366,1535,1846,
#Partially deleted in new
chr19	17337591	17341056	chr19:17337591-17341056	0	+	17337611	17339215	789624	7	73,248,87,203,144,166,13,	0,416,773,947,1531,1842,3452,
#Deleted in new
chr19	17337617	17338433	chr19:17337617-17338433	0	+	17337617	17337617	8553170	2	47,535,	0,281,
#Deleted in new
chr19	17338195	17339144	chr19:17338195-17339144	0	+	17338195	17338195	8553170	4	60,87,203,191,	0,169,343,758,
#Partially deleted in new
chr19	17338757	17341325	chr19:17338757-17341325	0	+	17338757	17338757	8553170	4	269,144,166,282,	0,365,676,2286,
#Deleted in new
chr19	17338759	17339479	chr19:17338759-17339479	0	+	17338759	17338759	8553170	2	507,46,	0,674,
#Partially deleted in new
chr19	17339388	17341631	chr19:17339388-17341631	0	+	17339388	17339388	8553170	3	211,279,154,	0,1655,2089,
#Deleted in new
chr19	17340945	17341664	chr19:17340945-17341664	0	+	17340945	17340945	8553170	2	377,187,	0,532,
#Partially deleted in new
chr19	17351447	17377350	chr19:17351447-17377350	3	-	17352361	17377288	789624	6	921,82,61,713,97,431,	0,9080,9324,13838,14651,25472,
#Partially deleted in new
chr19	17351449	17366151	chr19:17351449-17366151	0	-	17351561	17366151	789624	3	193,26,53,	0,14523,14649,
#Partially deleted in new
chr19	17365415	17377342	chr19:17365415-17377342	0	-	17365415	17377288	789624	4	50,50,97,423,	0,533,683,11504,
#Partially deleted in new
chr19	17390508	17394158	chr19:17390508-17394158	3	-	17390508	17394158	789624	4	151,133,97,324,	0,702,1241,3326,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	17391428	17392284	chr19:17391428-17392284	0	-	17391428	17391428	8553170	1	856,	0,
#Deleted in new
chr19	17402938	17405648	chr19:17402938-17405648	3	-	17403694	17405575	0	5	388,145,61,67,358,	0,741,1190,1432,2352,
#Deleted in new
chr19	17403240	17404537	chr19:17403240-17404537	0	-	17403240	17403240	8553170	4	86,145,61,167,	0,439,888,1130,
#Deleted in new
chr19	17403790	17405530	chr19:17403790-17405530	0	-	17403790	17403790	8553170	3	34,61,240,	0,338,1500,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	17405685	17414611	chr19:17405685-17414611	0	+	17405685	17405685	8553170	5	86,52,8,85,221,	0,559,7411,7535,8705,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	17405693	17415729	chr19:17405693-17415729	1	+	17405693	17405693	8553170	4	302,220,209,1339,	0,383,7403,8697,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	17405702	17415716	chr19:17405702-17415716	0	+	17405702	17405702	8553170	3	285,220,1326,	0,374,8688,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	17405709	17413397	chr19:17405709-17413397	0	+	17405709	17405709	8553170	3	62,220,301,	0,367,7387,
#Partially deleted in new
chr19	17405721	17423799	chr19:17405721-17423799	0	+	17420624	17423799	789624	7	50,220,99,97,127,120,107,	0,355,14591,14816,16610,17776,17971,
#Partially deleted in new
chr19	17405740	17424989	chr19:17405740-17424989	0	+	17423501	17424989	789624	7	31,220,120,107,62,57,59,	0,336,17757,17952,18265,18880,19190,
#Partially deleted in new
chr19	17405740	17413303	chr19:17405740-17413303	0	+	17405740	17405740	8553170	3	556,8,83,	0,7356,7480,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	17405742	17415738	chr19:17405742-17415738	2	+	17405742	17405742	789624	4	29,220,209,1348,	0,334,7354,8648,
#Partially deleted in new
chr19	17405743	17414449	chr19:17405743-17414449	0	+	17405743	17405743	8553170	5	252,52,8,85,59,	0,501,7353,7477,8647,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	17405748	17415687	chr19:17405748-17415687	0	+	17405748	17405748	8553170	5	23,220,8,85,1297,	0,328,7348,7472,8642,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	17405762	17415005	chr19:17405762-17415005	0	+	17405762	17405762	8553170	4	225,220,209,615,	0,314,7334,8628,
#Partially deleted in new
chr19	17405775	17413194	chr19:17405775-17413194	0	+	17405775	17405775	8553170	2	521,98,	0,7321,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	17405777	17406359	chr19:17405777-17406359	0	+	17405777	17405777	8553170	2	210,283,	0,299,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	17405821	17415656	chr19:17405821-17415656	1	+	17405821	17405821	789624	5	166,220,8,85,1266,	0,255,7275,7399,8569,
#Partially deleted in new
chr19	17405822	17413358	chr19:17405822-17413358	0	+	17405822	17405822	8553170	4	173,220,8,138,	0,254,7274,7398,
#Partially deleted in new
chr19	17405823	17414468	chr19:17405823-17414468	0	+	17405823	17405823	8553170	5	172,220,8,85,78,	0,253,7273,7397,8567,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	17406103	17419324	chr19:17406103-17419324	0	+	17406103	17406103	8553170	3	193,93,510,	0,6993,12711,
#Partially deleted in new
chr19	17406108	17420130	chr19:17406108-17420130	0	+	17406108	17406108	8553170	3	188,8,284,	0,6988,13738,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	17406114	17414347	chr19:17406114-17414347	0	+	17406114	17406114	8553170	3	182,209,212,	0,6982,8021,
#Partially deleted in new
chr19	17406144	17423799	chr19:17406144-17423799	2	+	17420624	17423799	789624	8	152,8,85,99,97,127,120,107,	0,6952,7076,14168,14393,16187,17353,17548,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	17414256	17422324	chr19:17414256-17422324	3	-	17414256	17414256	8553170	2	280,411,	0,7657,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	17417030	17418288	chr19:17417030-17418288	7	-	17417030	17417030	16724991	1	1258,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	17419080	17425339	chr19:17419080-17425339	1	+	17420135	17424993	789624	9	1145,99,97,127,120,107,62,57,409,	0,1232,1457,3251,4417,4612,4925,5540,5850,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	17419304	17419774	chr19:17419304-17419774	3	-	17419304	17419304	8553170	1	470,	0,
#Deleted in new
chr19	17420046	17421096	chr19:17420046-17421096	0	+	17420046	17420046	8553170	4	179,99,97,136,	0,266,491,914,
#Deleted in new
chr19	17420047	17421046	chr19:17420047-17421046	0	+	17420047	17420047	8553170	3	178,99,509,	0,265,490,
#Deleted in new
chr19	17420063	17420720	chr19:17420063-17420720	0	+	17420063	17420063	8553170	2	162,408,	0,249,
#Partially deleted in new
chr19	17420071	17433724	chr19:17420071-17433724	1	+	17420135	17433519	789624	8	154,99,97,127,120,107,62,325,	0,241,466,2260,3426,3621,3934,13328,
#Partially deleted in new
chr19	17420081	17424677	chr19:17420081-17424677	1	+	17420135	17424645	789624	7	144,99,97,120,107,62,57,	0,231,456,3416,3611,3924,4539,
#Partially deleted in new
chr19	17420110	17425332	chr19:17420110-17425332	1	+	17420135	17424993	789624	10	115,99,97,127,120,107,62,57,84,286,	0,202,427,2221,3387,3582,3895,4510,4820,4936,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	17420121	17422965	chr19:17420121-17422965	0	+	17420121	17420121	8553170	4	104,99,97,634,	0,191,416,2210,
#Partially deleted in new
chr19	17422284	17425318	chr19:17422284-17425318	0	+	17422284	17422284	8553170	6	174,120,107,62,57,388,	0,1213,1408,1721,2336,2646,
#Partially deleted in new
chr19	17422443	17425331	chr19:17422443-17425331	0	+	17422443	17424993	789624	5	15,120,107,62,401,	0,1054,1249,1562,2487,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	17435508	17448567	chr19:17435508-17448567	3	-	17436457	17448462	789624	3	1419,86,425,	0,9690,12634,
#Partially deleted in new
chr19	17436610	17460804	chr19:17436610-17460804	3	-	17436610	17460590	789624	4	317,86,228,261,	0,8588,19121,23933,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	17444811	17448309	chr19:17444811-17448309	0	-	17444811	17444811	8553170	2	473,167,	0,3331,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	17452210	17452969	chr19:17452210-17452969	3	-	17452210	17452210	8553170	1	759,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	17455424	17460954	chr19:17455424-17460954	3	-	17455646	17460869	789624	2	535,411,	0,5119,
#Partially deleted in new
chr19	17468768	17497314	chr19:17468768-17497314	0	+	17470540	17487070	789624	6	242,168,773,70,110,60,	0,1771,17794,18691,20239,28486,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	17470443	17506168	chr19:17470443-17506168	3	+	17470540	17504612	789624	12	264,395,162,70,92,110,210,127,138,165,147,1714,	0,16119,16730,17016,18404,18564,26811,29834,30051,30268,30829,34011,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	17470488	17504986	chr19:17470488-17504986	1	+	17487148	17504612	789624	13	219,240,395,236,70,92,110,210,127,138,165,147,532,	0,13393,16074,16611,16971,18359,18519,26766,29789,30006,30223,30784,33966,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	17470527	17499398	chr19:17470527-17499398	0	+	17470540	17488901	789624	5	180,70,92,110,2144,	0,16932,18320,18480,26727,
#Partially deleted in new
chr19	17470537	17489065	chr19:17470537-17489065	0	+	17470540	17487070	789624	5	170,773,70,92,58,	0,16025,16922,18310,18470,
#Partially deleted in new
chr19	17488759	17500555	chr19:17488759-17500555	0	+	17488759	17488759	8553170	5	180,110,210,127,61,	0,248,8495,11518,11735,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	17488989	17511889	chr19:17488989-17511889	3	-	17488989	17488989	789624	3	106,122,547,	0,2086,22353,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	17489800	17492389	chr19:17489800-17492389	1	-	17489800	17489800	8553170	3	320,122,34,	0,1275,2555,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	17495414	17506168	chr19:17495414-17506168	0	+	17495414	17495414	8553170	6	2050,127,138,175,139,1714,	0,4863,5080,5297,5866,9040,
#Partially deleted in new
chr19	17499869	17504601	chr19:17499869-17504601	0	+	17499869	17499869	8553170	4	85,127,138,147,	0,408,625,4585,
#Partially deleted in new
chr19	17500365	17504900	chr19:17500365-17504900	0	+	17500365	17504612	789624	4	39,138,165,446,	0,129,346,4089,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	17503435	17511468	chr19:17503435-17511468	1	-	17503435	17503435	8553170	2	187,126,	0,7907,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	17510099	17510850	chr19:17510099-17510850	1	-	17510099	17510099	8553170	1	751,	0,
#Partially deleted in new
chr19	17511628	17521288	chr19:17511628-17521288	3	+	17511672	17521081	789624	5	332,108,102,141,345,	0,4544,5659,6081,9315,
#Partially deleted in new
chr19	17511635	17521043	chr19:17511635-17521043	0	+	17511672	17517327	789624	6	325,108,104,102,141,100,	0,4537,4735,5652,6074,9308,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	17511643	17513244	chr19:17511643-17513244	0	+	17511643	17511643	8553170	1	1601,	0,
#Partially deleted in new
chr19	17511669	17517835	chr19:17511669-17517835	0	+	17511672	17517835	789624	5	291,24,108,102,126,	0,1275,4503,5618,6040,
#Partially deleted in new
chr19	17511864	17521288	chr19:17511864-17521288	0	+	17511864	17521081	789624	4	96,108,102,345,	0,4308,5423,9079,
#Partially deleted in new
chr19	17515741	17521030	chr19:17515741-17521030	0	+	17515741	17515741	8553170	4	539,102,141,87,	0,1546,1968,5202,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr19	17523300	17552026	chr19:17523300-17552026	1	+	17523438	17551898	789624	16	159,127,131,126,115,168,116,105,163,191,159,117,108,112,84,241,	0,3968,7454,8962,10286,14075,15849,16046,16302,17091,18835,20016,20223,23385,26143,28485,
#Partially deleted in new
chr19	17523300	17553839	chr19:17523300-17553839	3	+	17523438	17553563	789624	16	159,127,131,126,115,168,116,105,163,191,159,117,108,112,84,527,	0,3968,7454,8962,10286,14075,15849,16046,16302,17091,18835,20016,20223,23385,26143,30012,
#Partially deleted in new
chr19	17523300	17549811	chr19:17523300-17549811	1	+	17523438	17549685	789624	15	159,127,131,126,115,168,116,105,163,191,159,117,108,112,368,	0,3968,7454,8962,10286,14075,15849,16046,16302,17091,18835,20016,20223,23385,26143,
#Partially deleted in new
chr19	17527237	17553639	chr19:17527237-17553639	1	+	17527340	17553563	789624	15	158,131,126,115,168,116,105,163,191,159,117,108,112,84,327,	0,3517,5025,6349,10138,11912,12109,12365,13154,14898,16079,16286,19448,22206,26075,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	17527262	17552030	chr19:17527262-17552030	1	+	17527340	17551898	789624	15	133,131,126,115,168,116,105,163,191,159,117,108,112,84,245,	0,3492,5000,6324,10113,11887,12084,12340,13129,14873,16054,16261,19423,22181,24523,
#Partially deleted in new
chr19	17527266	17537505	chr19:17527266-17537505	0	+	17527266	17527266	8553170	4	129,126,177,130,	0,4996,6258,10109,
#Partially deleted in new
chr19	17527277	17553634	chr19:17527277-17553634	1	+	17539364	17553563	789624	14	118,126,115,168,116,105,163,191,159,117,108,112,84,322,	0,4985,6309,10098,11872,12069,12325,13114,14858,16039,16246,19408,22166,26035,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	17527287	17553645	chr19:17527287-17553645	0	+	17527340	17545357	789624	15	108,131,126,115,168,116,105,163,191,159,117,108,1575,73,1860,	0,3467,4975,6299,10088,11862,12059,12315,13104,14848,16029,16236,17935,22167,24498,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	17527290	17551960	chr19:17527290-17551960	1	+	17527340	17551898	789624	14	105,62,126,115,168,116,105,163,191,159,117,108,112,175,	0,3464,4972,6296,10085,11859,12056,12312,13101,14845,16026,16233,19395,24495,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	17527303	17552024	chr19:17527303-17552024	1	+	17527340	17551898	789624	14	92,131,126,115,168,116,105,163,191,159,117,112,84,239,	0,3451,4959,6283,10072,11846,12043,12299,13088,14832,16013,19382,22140,24482,
#Partially deleted in new
chr19	17533478	17539225	chr19:17533478-17539225	0	+	17533478	17533478	8553170	3	223,168,76,	0,3897,5671,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	17540152	17544009	chr19:17540152-17544009	0	+	17540152	17540152	8553170	3	430,159,693,	0,1983,3164,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	17555593	17583159	chr19:17555593-17583159	3	+	17555713	17581444	789624	12	380,111,118,135,205,120,77,107,133,128,207,1983,	0,3717,4754,11812,12915,16889,21601,21767,22363,23888,25105,25583,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	17556560	17568577	chr19:17556560-17568577	0	+	17559329	17568577	789624	5	119,111,118,135,69,	0,2750,3787,10845,11948,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	17566032	17571924	chr19:17566032-17571924	0	+	17566032	17566032	8553170	4	151,135,205,55,	0,1373,2476,5837,
#Partially deleted in new
chr19	17568612	17580806	chr19:17568612-17580806	0	+	17568612	17580806	789624	6	101,77,107,133,128,108,	0,8582,8748,9344,10869,12086,
#Partially deleted in new
chr19	17577074	17580870	chr19:17577074-17580870	0	+	17577074	17577074	8553170	5	197,107,133,128,172,	0,286,882,2407,3624,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	17579950	17583162	chr19:17579950-17583162	0	+	17579950	17579950	8553170	2	955,1986,	0,1226,
#Partially deleted in new
chr19	17589594	17590071	chr19:17589594-17590071	7	-	17589594	17589594	16724991	1	477,	0,
#Boundary problem: need 44, got 0, diff 44, mapped 0.0
chr19	17601327	17688199	chr19:17601327-17688199	3	-	17606053	17688199	789624	44	5027,160,93,148,81,57,30,39,6,124,153,89,78,84,144,97,127,86,134,135,90,69,151,164,116,170,142,228,220,72,6,79,47,109,516,208,36,55,74,124,118,100,30,22,	0,8612,10435,16374,17093,17578,19365,20504,22214,23501,25305,26181,26535,27912,28817,29326,31454,31780,34696,37755,38108,38512,39183,40065,41517,44346,44642,45937,47103,47584,48011,48181,51303,53946,54555,56734,62204,65322,66789,68225,71050,73329,74684,86850,
#Partially deleted in new
chr19	17605320	17688349	chr19:17605320-17688349	1	-	17606053	17688199	789624	45	1034,160,93,57,148,81,57,30,39,6,124,153,89,78,84,144,97,127,86,134,135,90,69,151,164,116,170,142,228,220,72,6,79,47,109,516,208,36,55,74,124,118,100,30,172,	0,4619,6442,11087,12381,13100,13585,15372,16511,18221,19508,21312,22188,22542,23919,24824,25333,27461,27787,30703,33762,34115,34519,35190,36072,37524,40353,40649,41944,43110,43591,44018,44188,47310,49953,50562,52741,58211,61329,62796,64232,67057,69336,70691,82857,
#Partially deleted in new
chr19	17605960	17688326	chr19:17605960-17688326	1	-	17606053	17688199	789624	42	394,160,93,57,148,81,57,124,153,89,78,84,144,97,127,86,134,135,90,69,151,164,116,170,142,228,220,72,6,79,47,109,516,208,36,55,74,124,118,100,30,149,	0,3979,5802,10447,11741,12460,12945,18868,20672,21548,21902,23279,24184,24693,26821,27147,30063,33122,33475,33879,34550,35432,36884,39713,40009,41304,42470,42951,43378,43548,46670,49313,49922,52101,57571,60689,62156,63592,66417,68696,70051,82217,
#Partially deleted in new
chr19	17606050	17688365	chr19:17606050-17688365	1	-	17606053	17688199	789624	40	304,160,93,148,81,57,124,153,89,78,84,144,97,127,86,134,135,90,69,151,164,116,170,142,228,220,72,79,47,109,516,208,36,55,74,124,118,100,30,188,	0,3889,5712,11651,12370,12855,18778,20582,21458,21812,23189,24094,24603,26731,27057,29973,33032,33385,33789,34460,35342,36794,39623,39919,41214,42380,42861,43458,46580,49223,49832,52011,57481,60599,62066,63502,66327,68606,69961,82127,
#Partially deleted in new
chr19	17606313	17612160	chr19:17606313-17612160	0	-	17606313	17606313	8553170	3	41,160,398,	0,3626,5449,
#Partially deleted in new
chr19	17609974	17619042	chr19:17609974-17619042	0	-	17609974	17609974	8553170	5	125,93,148,81,137,	0,1788,7727,8446,8931,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	17613721	17614430	chr19:17613721-17614430	3	+	17613721	17613721	8553170	2	137,282,	0,427,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	17622446	17623338	chr19:17622446-17623338	3	+	17622446	17622446	8553170	1	892,	0,
#Partially deleted in new
chr19	17626287	17628337	chr19:17626287-17628337	0	-	17626287	17626287	8553170	3	498,89,475,	0,1221,1575,
#Partially deleted in new
chr19	17719241	17725953	chr19:17719241-17725953	0	+	17719257	17725953	789624	5	134,102,83,141,125,	0,1694,4884,5807,6587,
#Partially deleted in new
chr19	17719351	17734516	chr19:17719351-17734516	3	+	17719502	17734428	789624	7	269,102,83,141,2344,236,244,	0,1584,4774,5697,6477,13841,14921,
#Partially deleted in new
chr19	17719479	17726543	chr19:17719479-17726543	0	+	17719502	17724204	789624	5	141,52,83,141,715,	0,1506,4646,5569,6349,
#Partially deleted in new
chr19	17719479	17733338	chr19:17719479-17733338	0	+	17719502	17733338	789624	6	141,102,83,48,60,146,	0,1456,4646,5569,8633,13713,
#Partially deleted in new
chr19	17719479	17726050	chr19:17719479-17726050	0	+	17719502	17726050	789624	4	141,83,141,222,	0,4646,5569,6349,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	17719479	17724208	chr19:17719479-17724208	0	+	17719502	17721312	789624	4	141,102,213,83,	0,1456,1771,4646,
#Partially deleted in new
chr19	17719483	17725944	chr19:17719483-17725944	0	+	17719483	17719483	8553170	5	137,102,83,160,116,	0,1452,4642,5546,6345,
#Partially deleted in new
chr19	17719496	17728111	chr19:17719496-17728111	0	+	17719496	17719496	8553170	2	124,823,	0,7792,
#Partially deleted in new
chr19	17719770	17725964	chr19:17719770-17725964	0	+	17719770	17719770	8553170	5	105,102,83,141,136,	0,1165,4355,5278,6058,
#Partially deleted in new
chr19	17719780	17725855	chr19:17719780-17725855	0	+	17719780	17719780	8553170	5	186,102,83,141,27,	0,1155,4345,5268,6048,
#Partially deleted in new
chr19	17720135	17726050	chr19:17720135-17726050	0	+	17720135	17720135	8553170	5	18,102,83,160,222,	0,800,3990,4894,5693,
#Partially deleted in new
chr19	17720155	17734490	chr19:17720155-17734490	1	+	17720390	17734428	789624	7	275,102,83,141,2344,236,218,	0,780,3970,4893,5673,13037,14117,
#Partially deleted in new
chr19	17720160	17726000	chr19:17720160-17726000	0	+	17720356	17720978	789624	5	393,102,83,141,172,	0,775,3965,4888,5668,
#Partially deleted in new
chr19	17720163	17725089	chr19:17720163-17725089	0	+	17720356	17721034	789624	4	390,52,83,41,	0,822,3962,4885,
#Partially deleted in new
chr19	17720190	17724195	chr19:17720190-17724195	0	+	17720356	17720560	789624	3	401,102,70,	0,745,3935,
#Partially deleted in new
chr19	17720200	17725917	chr19:17720200-17725917	0	+	17720200	17720200	8553170	5	143,102,83,141,89,	0,735,3925,4848,5628,
#Partially deleted in new
chr19	17720723	17726007	chr19:17720723-17726007	0	+	17720723	17720723	8553170	4	314,83,141,179,	0,3402,4325,5105,
#Partially deleted in new
chr19	17720751	17725975	chr19:17720751-17725975	0	+	17720751	17720751	8553170	5	69,102,83,141,147,	0,184,3374,4297,5077,
#Partially deleted in new
chr19	17727437	17734513	chr19:17727437-17734513	0	+	17727437	17734428	789624	3	59,148,241,	0,5843,6835,
#Partially deleted in new
chr19	17727839	17734513	chr19:17727839-17734513	3	-	17727839	17727839	8553170	3	140,5,72,	0,5415,6602,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	17728147	17734350	chr19:17728147-17734350	0	+	17728147	17728147	8553170	4	25,244,236,78,	0,590,5045,6125,
#Deleted in new
chr19	17733019	17734513	chr19:17733019-17734513	0	+	17733019	17733019	8553170	2	409,241,	0,1253,
#Partially deleted in new
chr19	17747717	17788568	chr19:17747717-17788568	3	+	17755164	17788306	789624	27	97,116,92,75,142,153,105,99,97,45,85,25,58,179,25,52,92,276,113,88,109,156,133,200,56,165,285,	0,7358,15044,16657,18951,22707,23074,24739,24927,26521,26676,27338,27738,28265,28529,28917,30419,30891,33513,33734,33994,35299,36385,37007,38856,39964,40566,
#Partially deleted in new
chr19	17747717	17788557	chr19:17747717-17788557	1	+	17755164	17788298	789624	29	97,45,94,70,92,75,142,153,105,99,97,45,85,25,58,179,25,52,92,276,113,88,109,156,133,200,56,165,288,	0,6599,6874,7404,15044,16657,18951,22707,23074,24739,24927,26521,26676,27338,27738,28265,28529,28917,30419,30891,33513,33734,33994,35299,36385,37007,38856,39964,40552,
#Partially deleted in new
chr19	17747744	17788568	chr19:17747744-17788568	1	+	17755164	17788306	789624	28	70,45,74,92,75,142,153,105,99,97,45,85,25,58,179,25,52,92,276,113,88,109,156,133,200,56,165,285,	0,6572,7373,15017,16630,18924,22680,23047,24712,24900,26494,26649,27311,27711,28238,28502,28890,30392,30864,33486,33707,33967,35272,36358,36980,38829,39937,40539,
#Partially deleted in new
chr19	17747745	17770827	chr19:17747745-17770827	0	+	17755164	17770827	789624	9	69,150,94,70,92,75,142,153,36,	0,6571,6846,7376,15016,16629,18923,22679,23046,
#Partially deleted in new
chr19	17747752	17766751	chr19:17747752-17766751	0	+	17755164	17766751	789624	7	62,45,167,74,92,75,83,	0,6564,6839,7365,15009,16622,18916,
#Partially deleted in new
chr19	17747755	17770463	chr19:17747755-17770463	0	+	17755164	17770463	789624	8	59,45,30,74,92,75,142,39,	0,6561,6836,7362,15006,16619,18913,22669,
#Partially deleted in new
chr19	17747755	17764383	chr19:17747755-17764383	0	+	17755164	17764383	789624	6	59,150,167,74,92,9,	0,6561,6836,7362,15006,16619,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	17747758	17762780	chr19:17747758-17762780	0	+	17762774	17762780	8553170	6	56,150,167,74,107,19,	0,6558,6833,7359,10926,15003,
#Partially deleted in new
chr19	17747760	17755622	chr19:17747760-17755622	0	+	17747760	17747760	8553170	4	54,45,94,501,	0,6556,6831,7361,
#Partially deleted in new
chr19	17747761	17770856	chr19:17747761-17770856	0	+	17764405	17770856	789624	6	53,92,75,142,153,65,	0,15000,16613,18907,22663,23030,
#Partially deleted in new
chr19	17747761	17766622	chr19:17747761-17766622	0	+	17747761	17747761	8553170	7	53,150,94,70,92,75,52,	0,6555,6830,7360,15000,16613,18809,
#Partially deleted in new
chr19	17747767	17766695	chr19:17747767-17766695	0	+	17747767	17747767	8553170	6	47,45,74,92,75,125,	0,6549,7350,14994,16607,18803,
#Partially deleted in new
chr19	17751476	17788557	chr19:17751476-17788557	1	+	17755164	17788306	789624	29	101,45,94,70,92,75,142,153,105,99,97,45,85,25,58,179,25,52,92,276,113,88,109,156,133,200,56,165,274,	0,2840,3115,3645,11285,12898,15192,18948,19315,20980,21168,22762,22917,23579,23979,24506,24770,25158,26660,27132,29754,29975,30235,31540,32626,33248,35097,36205,36807,
#Partially deleted in new
chr19	17751480	17762840	chr19:17751480-17762840	0	+	17755164	17762840	789624	5	97,150,167,74,79,	0,2836,3111,3637,11281,
#Partially deleted in new
chr19	17751480	17766809	chr19:17751480-17766809	0	+	17755164	17766809	789624	7	97,45,30,74,92,75,141,	0,2836,3111,3637,11281,12894,15188,
#Partially deleted in new
chr19	17751488	17766778	chr19:17751488-17766778	0	+	17755164	17766778	789624	7	89,45,94,70,92,75,110,	0,2828,3103,3633,11273,12886,15180,
#Partially deleted in new
chr19	17751498	17774241	chr19:17751498-17774241	0	+	17755164	17774241	789624	12	79,45,167,74,92,75,142,153,105,99,97,3,	0,2818,3093,3619,11263,12876,15170,18926,19293,20958,21146,22740,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	17751502	17770554	chr19:17751502-17770554	0	+	17755164	17770554	789624	9	75,118,45,94,70,92,75,142,130,	0,781,2814,3089,3619,11259,12872,15166,18922,
#Partially deleted in new
chr19	17751505	17788453	chr19:17751505-17788453	1	+	17764405	17788306	789624	27	72,45,92,75,142,153,105,99,97,45,85,25,58,179,25,52,92,276,113,88,109,156,133,200,56,165,170,	0,2811,11256,12869,15163,18919,19286,20951,21139,22733,22888,23550,23950,24477,24741,25129,26631,27103,29725,29946,30206,31511,32597,33219,35068,36176,36778,
#Partially deleted in new
chr19	17751505	17772517	chr19:17751505-17772517	0	+	17755164	17772517	789624	10	72,150,94,70,92,75,142,153,105,61,	0,2811,3086,3616,11256,12869,15163,18919,19286,20951,
#Partially deleted in new
chr19	17751535	17770896	chr19:17751535-17770896	0	+	17755164	17770896	789624	9	42,150,94,70,92,75,142,114,105,	0,2781,3056,3586,11226,12839,15133,18928,19256,
#Partially deleted in new
chr19	17754209	17762780	chr19:17754209-17762780	0	+	17755164	17762780	789624	3	476,70,19,	0,912,8552,
#Partially deleted in new
chr19	17754211	17754898	chr19:17754211-17754898	0	+	17754211	17754211	8553170	2	255,307,	0,380,
#Partially deleted in new
chr19	17754211	17766766	chr19:17754211-17766766	0	+	17755164	17766766	789624	6	150,94,70,92,75,98,	0,380,910,8550,10163,12457,
#Partially deleted in new
chr19	17754217	17762805	chr19:17754217-17762805	0	+	17755164	17762805	789624	4	249,167,74,44,	0,374,900,8544,
#Partially deleted in new
chr19	17754675	17788562	chr19:17754675-17788562	1	+	17755164	17788306	789624	27	6,74,92,75,142,153,105,99,97,45,85,25,58,179,25,52,92,276,113,88,109,156,133,200,56,165,279,	0,442,8086,9699,11993,15749,16116,17781,17969,19563,19718,20380,20780,21307,21571,21959,23461,23933,26555,26776,27036,28341,29427,30049,31898,33006,33608,
#Partially deleted in new
chr19	17755097	17772697	chr19:17755097-17772697	0	+	17755164	17772697	789624	8	94,92,75,142,114,105,99,53,	0,7664,9277,11571,15366,15694,17359,17547,
#Partially deleted in new
chr19	17762702	17788538	chr19:17762702-17788538	1	+	17762713	17788306	789624	25	151,75,142,153,105,99,97,45,85,25,58,179,25,52,92,276,113,88,109,156,133,200,56,165,255,	0,1672,3966,7722,8089,9754,9942,11536,11691,12353,12753,13280,13544,13932,15434,15906,18528,18749,19009,20314,21400,22022,23871,24979,25581,
#Partially deleted in new
chr19	17770422	17774589	chr19:17770422-17774589	0	+	17770422	17770422	8553170	4	155,105,45,196,	0,369,3816,3971,
#Partially deleted in new
chr19	17770842	17774695	chr19:17770842-17774695	0	+	17770842	17770842	8553170	5	54,99,97,45,302,	0,1614,1802,3396,3551,
#Partially deleted in new
chr19	17774666	17776043	chr19:17774666-17776043	0	+	17774666	17774666	8553170	3	414,58,61,	0,789,1316,
#Partially deleted in new
chr19	17776156	17781722	chr19:17776156-17781722	0	+	17776156	17776156	8553170	7	115,52,92,276,113,88,11,	0,478,1980,2452,5074,5295,5555,
#Partially deleted in new
chr19	17776625	17783058	chr19:17776625-17783058	0	+	17776625	17776625	8553170	7	61,92,276,113,88,109,42,	0,1511,1983,4605,4826,5086,6391,
#Partially deleted in new
chr19	17778440	17783172	chr19:17778440-17783172	0	+	17778440	17778440	8553170	5	444,113,88,109,156,	0,2790,3011,3271,4576,
#Partially deleted in new
chr19	17778472	17784235	chr19:17778472-17784235	0	+	17778472	17778472	8553170	5	412,88,109,156,133,	0,2979,3239,4544,5630,
#Partially deleted in new
chr19	17794827	17811753	chr19:17794827-17811753	0	+	17807807	17811753	789624	3	56,617,183,	0,12930,16743,
#Partially deleted in new
chr19	17795109	17813082	chr19:17795109-17813082	3	+	17807807	17812122	789624	3	97,617,1512,	0,12648,16461,
#Partially deleted in new
chr19	17795135	17808189	chr19:17795135-17808189	0	+	17807807	17808189	789624	2	38,432,	0,12622,
#Partially deleted in new
chr19	17795156	17812233	chr19:17795156-17812233	1	+	17807807	17812122	789624	3	50,636,663,	0,12582,16414,
#Partially deleted in new
chr19	17816511	17821523	chr19:17816511-17821523	3	-	17816853	17821506	0	2	548,207,	0,4805,
#Partially deleted in new
chr19	17816512	17821505	chr19:17816512-17821505	0	-	17817055	17821505	789624	2	569,189,	0,4804,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	17816513	17821574	chr19:17816513-17821574	1	-	17816870	17821506	0	3	546,95,258,	0,3882,4803,
#Partially deleted in new
chr19	17824779	17847991	chr19:17824779-17847991	0	-	17824779	17824779	8553170	14	531,487,132,128,187,112,158,123,295,146,112,124,228,46,	0,11947,13152,13483,14697,15450,16609,16860,17536,18247,18600,18997,19454,23166,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr19	17824785	17848032	chr19:17824785-17848032	3	-	17826742	17844417	0	24	2125,111,118,173,125,190,140,151,152,133,128,85,132,128,187,112,158,123,295,146,112,124,197,87,	0,5322,5717,6442,6888,7733,8004,9785,10066,10297,11138,12343,13146,13477,14691,15444,16603,16854,17530,18241,18594,18991,19448,23160,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr19	17826151	17844447	chr19:17826151-17844447	1	-	17826742	17844417	0	23	759,111,118,173,125,190,140,151,152,133,128,85,132,128,187,112,158,123,295,146,112,124,214,	0,3956,4351,5076,5522,6367,6638,8419,8700,8931,9772,10977,11780,12111,13325,14078,15237,15488,16164,16875,17228,17625,18082,
#Partially deleted in new
chr19	17829787	17848017	chr19:17829787-17848017	1	-	17830029	17844417	0	23	431,118,173,125,190,140,151,152,133,128,85,132,128,187,112,158,123,295,146,112,124,197,72,	0,715,1440,1886,2731,3002,4783,5064,5295,6136,7341,8144,8475,9689,10442,11601,11852,12528,13239,13592,13989,14446,18158,
#Partially deleted in new
chr19	17838269	17848032	chr19:17838269-17848032	0	-	17838269	17838269	8553170	12	121,114,187,112,158,123,295,146,112,124,197,87,	0,910,1207,1960,3119,3370,4046,4757,5110,5507,5964,9676,
#Partially deleted in new
chr19	17839423	17842525	chr19:17839423-17842525	0	-	17839423	17839423	8553170	5	240,112,158,123,210,	0,806,1965,2216,2892,
#Partially deleted in new
chr19	17842434	17848071	chr19:17842434-17848071	0	-	17842434	17842434	8553170	4	738,112,197,126,	0,945,1799,5511,
#Partially deleted in new
chr19	17859875	17863316	chr19:17859875-17863316	3	+	17859956	17863263	0	5	99,180,130,110,146,	0,1417,2218,3042,3295,
#Partially deleted in new
chr19	17859920	17864153	chr19:17859920-17864153	1	+	17859956	17863263	789624	5	54,180,130,92,935,	0,1372,2173,2997,3298,
#Partially deleted in new
chr19	17859931	17863315	chr19:17859931-17863315	1	+	17859956	17863263	789624	6	43,15,48,130,110,145,	0,1361,1493,2162,2986,3239,
#Partially deleted in new
chr19	17859952	17862177	chr19:17859952-17862177	0	+	17859952	17859952	8553170	2	22,885,	0,1340,
#Partially deleted in new
chr19	17860124	17863243	chr19:17860124-17863243	0	+	17861361	17863243	789624	5	190,180,130,110,73,	0,1168,1969,2793,3046,
#Partially deleted in new
chr19	17860762	17863304	chr19:17860762-17863304	1	+	17861361	17863263	789624	4	710,130,110,134,	0,1331,2155,2408,
#Partially deleted in new
chr19	17861332	17862907	chr19:17861332-17862907	0	+	17861332	17861332	8553170	2	140,814,	0,761,
#Partially deleted in new
chr19	17862587	17862720	chr19:17862587-17862720	3	+	17862587	17862587	789624	1	133,	0,
#Deleted in new
chr19	17871272	17871705	chr19:17871272-17871705	3	-	17871272	17871272	8553170	1	433,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	17871972	17895174	chr19:17871972-17895174	3	+	17872319	17893877	789624	15	704,66,52,68,155,141,130,89,113,71,87,197,125,116,1462,	0,2165,2521,2691,3979,5750,5991,8892,9987,10176,11708,11877,16358,18913,21740,
#Partially deleted in new
chr19	17881978	17888378	chr19:17881978-17888378	0	+	17881978	17881978	8553170	4	241,87,197,48,	0,1702,1871,6352,
#Partially deleted in new
chr19	17933015	17943937	chr19:17933015-17943937	3	+	17936420	17943715	789624	5	33,170,190,115,430,	0,3394,9640,10245,10492,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	17933022	17936992	chr19:17933022-17936992	0	+	17933022	17933022	8553170	2	26,583,	0,3387,
#Partially deleted in new
chr19	17936250	17943321	chr19:17936250-17943321	0	+	17936420	17943321	789624	3	329,190,61,	0,6405,7010,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	17951292	18000080	chr19:17951292-18000080	3	+	17973888	17998406	789624	11	117,121,483,96,419,142,111,128,9,70,1929,	0,3268,22515,23799,30416,34019,37122,38423,41761,42197,46859,
#Partially deleted in new
chr19	17952184	17954653	chr19:17952184-17954653	0	+	17952184	17952184	8553170	2	154,93,	0,2376,
#Partially deleted in new
chr19	17967124	17974113	chr19:17967124-17974113	0	+	17967149	17974113	789624	2	193,306,	0,6683,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	17972024	17972117	chr19:17972024-17972117	7	+	17972024	17972024	16724991	1	93,	0,
#Partially deleted in new
chr19	17973868	17998445	chr19:17973868-17998445	1	+	17973888	17998406	789624	9	422,96,419,142,111,129,6,72,294,	0,1223,7840,11443,14546,15847,15979,19619,24283,
#Partially deleted in new
chr19	18001131	18014102	chr19:18001131-18014102	1	+	18001314	18012966	789624	8	442,67,148,103,257,163,158,1190,	0,7579,7839,8460,8651,9064,9440,11781,
#Partially deleted in new
chr19	18007181	18009889	chr19:18007181-18009889	0	+	18009871	18009889	8553170	5	190,67,148,103,107,	0,1529,1789,2410,2601,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	18007239	18008977	chr19:18007239-18008977	0	+	18007239	18007239	8553170	4	132,253,67,7,	0,350,1471,1731,
#Partially deleted in new
chr19	18008167	18014102	chr19:18008167-18014102	3	+	18008310	18012966	789624	8	417,67,148,103,257,163,158,1190,	0,543,803,1424,1615,2028,2404,4745,
#Deleted in new
chr19	18008167	18010030	chr19:18008167-18010030	0	+	18008310	18010030	789624	4	610,148,103,248,	0,803,1424,1615,
#Partially deleted in new
chr19	18008169	18014100	chr19:18008169-18014100	0	+	18008169	18008169	8553170	2	2560,1188,	0,4743,
#Deleted in new
chr19	18008169	18008861	chr19:18008169-18008861	0	+	18008169	18008169	8553170	2	415,151,	0,541,
#Deleted in new
chr19	18008169	18009850	chr19:18008169-18009850	0	+	18008169	18008169	8553170	6	59,131,67,148,103,68,	0,284,541,801,1422,1613,
#Deleted in new
chr19	18009439	18009881	chr19:18009439-18009881	3	-	18009439	18009439	8553170	1	442,	0,
#Deleted in new
chr19	18009548	18010358	chr19:18009548-18010358	0	+	18009548	18009548	8553170	3	146,257,163,	0,234,647,
#Partially deleted in new
chr19	18022402	18032099	chr19:18022402-18032099	5	+	18022402	18022402	16724991	2	265,1404,	0,8293,
#Partially deleted in new
chr19	18030628	18032029	chr19:18030628-18032029	7	+	18030628	18030628	16724991	1	1401,	0,
#Deleted in new
chr19	18040354	18041083	chr19:18040354-18041083	7	+	18040354	18040354	16724991	1	729,	0,
#Deleted in new
chr19	18048636	18049090	chr19:18048636-18049090	7	+	18048636	18048636	16724991	1	454,	0,
#Partially deleted in new
chr19	18058994	18087003	chr19:18058994-18087003	1	-	18059607	18086823	789624	17	619,192,76,97,135,156,138,168,238,83,120,31,140,170,115,60,244,	0,899,2127,3186,4881,7547,9394,10551,13117,14522,16754,17302,18521,21837,23155,24437,27765,
#Partially deleted in new
chr19	18058994	18098944	chr19:18058994-18098944	3	-	18059607	18086823	789624	18	619,192,76,97,135,156,138,168,238,83,120,31,140,170,115,60,173,190,	0,899,2127,3186,4881,7547,9394,10551,13117,14522,16754,17302,18521,21837,23155,24437,27765,39760,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	18070561	18086932	chr19:18070561-18086932	1	-	18071208	18086823	789624	10	772,238,83,120,31,140,170,115,60,173,	0,1550,2955,5187,5735,6954,10270,11588,12870,16198,
#Partially deleted in new
chr19	18080897	18086996	chr19:18080897-18086996	0	-	18080897	18086823	789624	4	104,127,60,237,	0,1252,2534,5862,
#Partially deleted in new
chr19	18082186	18098816	chr19:18082186-18098816	0	-	18082186	18086823	789624	6	78,60,173,120,102,62,	0,1245,4573,8463,9257,16568,
#Partially deleted in new
chr19	18082233	18098927	chr19:18082233-18098927	0	-	18082233	18086823	789624	5	31,60,173,120,173,	0,1198,4526,8416,16521,
#Partially deleted in new
chr19	18083111	18086930	chr19:18083111-18086930	0	-	18083111	18083111	8553170	2	380,171,	0,3648,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr19	18097792	18151692	chr19:18097792-18151692	3	+	18097792	18149726	0	27	39,32,89,73,79,158,76,210,102,133,59,86,209,139,133,166,102,123,110,134,245,228,227,123,137,182,2502,	0,9794,23892,24057,24880,25424,25787,26146,26472,26849,30607,31073,32701,34116,36786,37024,37947,39446,41222,44089,45970,46673,47210,47950,49088,49650,51398,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	18110169	18129359	chr19:18110169-18129359	0	+	18110169	18110169	8553170	12	197,90,89,73,79,158,76,210,102,133,59,494,	0,482,11515,11680,12503,13047,13410,13769,14095,14472,18230,18696,
#Partially deleted in new
chr19	18123398	18124132	chr19:18123398-18124132	0	+	18123398	18123398	8553170	2	257,194,	0,540,
#Partially deleted in new
chr19	18137354	18144508	chr19:18137354-18144508	0	+	18137354	18143957	789624	5	7,110,134,60,43,	0,1660,4527,6593,7111,
#Partially deleted in new
chr19	18144521	18151691	chr19:18144521-18151691	3	-	18144521	18144521	8553170	2	86,377,	0,6793,
#Partially deleted in new
chr19	18144549	18146974	chr19:18144549-18146974	0	+	18144549	18144549	8553170	4	144,88,123,94,	0,592,1193,2331,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr19	18153117	18170540	chr19:18153117-18170540	3	+	18155879	18169294	0	16	177,745,93,51,132,217,86,109,99,181,126,143,177,72,171,1454,	0,2339,7353,7801,7936,8161,8848,9084,9290,9849,10145,13042,14012,15357,15608,15969,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr19	18153157	18178117	chr19:18153157-18178117	3	+	18155879	18169294	8553170	25	137,745,93,51,132,217,86,109,99,181,126,143,177,72,171,1408,77,121,170,183,75,93,153,54,269,	0,2299,7313,7761,7896,8121,8808,9044,9250,9809,10105,13002,13972,15317,15568,15929,19199,19599,20646,21882,22153,22447,23982,24553,24691,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	18155621	18170073	chr19:18155621-18170073	0	+	18155879	18166140	789624	15	580,93,51,132,217,86,109,99,181,126,192,177,72,171,987,	0,4849,5297,5432,5657,6344,6580,6786,7345,7641,10489,11508,12853,13104,13465,
#Partially deleted in new
chr19	18155879	18169294	chr19:18155879-18169294	1	+	18155879	18169294	0	15	322,93,51,132,217,86,109,99,181,126,143,177,72,171,208,	0,4591,5039,5174,5399,6086,6322,6528,7087,7383,10280,11250,12595,12846,13207,
#Partially deleted in new
chr19	18155879	18166140	chr19:18155879-18166140	1	+	18155879	18166140	789624	11	322,93,51,132,217,86,109,99,181,126,30,	0,4591,5039,5174,5399,6086,6322,6528,7087,7383,10231,
#Deleted in new
chr19	18160866	18161468	chr19:18160866-18161468	0	+	18160866	18160866	8553170	3	103,132,190,	0,187,412,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	18162045	18162717	chr19:18162045-18162717	0	+	18162045	18162045	8553170	3	6,109,310,	0,156,362,
#Partially deleted in new
chr19	18166275	18169231	chr19:18166275-18169231	0	+	18166275	18168826	789624	5	27,177,72,167,145,	0,854,2199,2454,2811,
#Deleted in new
chr19	18168497	18169152	chr19:18168497-18169152	0	+	18168497	18168497	8553170	2	399,66,	0,589,
#Partially deleted in new
chr19	18173161	18175222	chr19:18173161-18175222	0	+	18173841	18175222	789624	3	58,170,183,	0,642,1878,
#Partially deleted in new
chr19	18173666	18178117	chr19:18173666-18178117	3	+	18173841	18177911	789624	7	307,183,75,93,153,54,269,	0,1373,1644,1938,3473,4044,4182,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	18174168	18178117	chr19:18174168-18178117	0	+	18174168	18174168	8553170	5	1054,75,93,625,269,	0,1142,1436,2971,3680,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	18193181	18196742	chr19:18193181-18196742	3	+	18193281	18196055	789624	5	287,171,77,129,744,	0,682,1595,1776,2817,
#Deleted in new
chr19	18193217	18194160	chr19:18193217-18194160	0	+	18193217	18193217	8553170	2	251,297,	0,646,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	18193231	18196742	chr19:18193231-18196742	0	+	18193231	18193231	8553170	3	803,129,744,	0,1726,2767,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	18193249	18196948	chr19:18193249-18196948	0	+	18193249	18193249	8553170	4	785,77,129,950,	0,1527,1708,2749,
#Partially deleted in new
chr19	18196783	18204074	chr19:18196783-18204074	3	-	18197469	18202740	789624	5	877,125,119,228,179,	0,1941,3543,5729,7112,
#Partially deleted in new
chr19	18196798	18204042	chr19:18196798-18204042	1	-	18197469	18200388	789624	4	862,125,119,147,	0,1926,3528,7097,
#Partially deleted in new
chr19	18200326	18204012	chr19:18200326-18204012	0	-	18200326	18202740	789624	3	119,343,117,	0,2186,3569,
#Deleted in new
chr19	18202337	18204035	chr19:18202337-18204035	0	-	18202337	18202337	8553170	2	403,140,	0,1558,
#Partially deleted in new
chr19	18204733	18209046	chr19:18204733-18209046	1	+	18204733	18204733	8553170	3	166,140,109,	0,3556,4204,
#Deleted in new
chr19	18204740	18205563	chr19:18204740-18205563	0	+	18204740	18204740	789624	2	159,108,	0,715,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr19	18207960	18255419	chr19:18207960-18255419	3	-	18210928	18233191	8553170	19	3316,183,123,155,100,165,99,164,94,113,50,74,37,192,451,204,161,98,200,	0,3798,5407,8780,10188,10373,10979,11273,12265,12442,12913,13144,13300,14171,24989,28897,42351,44103,47259,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr19	18208651	18248200	chr19:18208651-18248200	3	-	18210928	18233191	0	16	2625,183,123,155,100,165,99,164,94,113,50,74,37,192,451,30,	0,3107,4716,8089,9497,9682,10288,10582,11574,11751,12222,12453,12609,13480,24298,39519,
#Partially deleted in new
chr19	18210542	18224493	chr19:18210542-18224493	1	-	18210928	18222247	0	15	734,183,123,155,100,165,99,164,94,113,50,74,37,192,259,	0,1216,2825,6198,7606,7791,8397,8691,9683,9860,10331,10562,10718,11589,13692,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	18210551	18233385	chr19:18210551-18233385	0	-	18210551	18210551	8553170	13	725,183,123,155,100,165,99,426,94,776,37,192,436,	0,1207,2816,6189,7597,7782,8388,8682,9674,9851,10709,11580,22398,
#Partially deleted in new
chr19	18210559	18226475	chr19:18210559-18226475	1	-	18210928	18226415	0	15	717,183,123,155,100,165,99,164,94,113,50,74,37,192,206,	0,1199,2808,6181,7589,7774,8380,8674,9666,9843,10314,10545,10701,11572,15710,
#Partially deleted in new
chr19	18210559	18233671	chr19:18210559-18233671	1	-	18210928	18233191	0	15	717,183,123,155,100,165,99,164,94,113,50,74,37,192,722,	0,1199,2808,6181,7589,7774,8380,8674,9666,9843,10314,10545,10701,11572,22390,
#Partially deleted in new
chr19	18210830	18221161	chr19:18210830-18221161	1	-	18210928	18220417	789624	11	446,183,123,155,100,165,99,164,94,113,57,	0,928,2537,5910,7318,7503,8109,8403,9395,9572,10274,
#Partially deleted in new
chr19	18210830	18226425	chr19:18210830-18226425	0	-	18219357	18226415	789624	14	446,183,123,155,100,165,99,164,94,113,74,37,192,156,	0,928,2537,5910,7318,7503,8109,8403,9395,9572,10274,10430,11301,15439,
#Partially deleted in new
chr19	18210928	18221232	chr19:18210928-18221232	0	-	18210928	18210928	8553170	10	348,183,123,155,100,165,99,164,94,128,	0,830,2439,5812,7220,7405,8011,8305,9297,10176,
#Partially deleted in new
chr19	18210928	18221122	chr19:18210928-18221122	0	-	18220303	18221122	789624	9	348,183,123,155,100,99,164,94,18,	0,830,2439,5812,7220,8011,8305,9297,10176,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	18220236	18221135	chr19:18220236-18221135	0	-	18220531	18221135	789624	3	83,367,31,	0,166,868,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	18220236	18221135	chr19:18220236-18221135	0	-	18220704	18221135	789624	3	83,306,31,	0,166,868,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	18220268	18221135	chr19:18220268-18221135	0	-	18220268	18220268	8553170	3	51,521,31,	0,134,836,
#Partially deleted in new
chr19	18220904	18225786	chr19:18220904-18225786	0	-	18220904	18222247	789624	5	19,74,37,192,261,	0,200,356,1227,4621,
#Partially deleted in new
chr19	18222285	18234256	chr19:18222285-18234256	0	-	18222285	18233191	789624	3	38,451,39,	0,10664,11932,
#Partially deleted in new
chr19	18249949	18255351	chr19:18249949-18255351	0	-	18249949	18249949	789624	4	228,161,98,132,	0,362,2114,5270,
#Partially deleted in new
chr19	18250038	18255419	chr19:18250038-18255419	3	-	18250129	18255307	789624	4	139,161,408,200,	0,273,2025,5181,
#Partially deleted in new
chr19	18250138	18252431	chr19:18250138-18252431	0	-	18250138	18250138	8553170	2	334,368,	0,1925,
#Partially deleted in new
chr19	18257096	18274509	chr19:18257096-18274509	1	-	18257179	18269478	789624	5	1010,618,827,122,107,	0,7827,9603,12369,17306,
#Partially deleted in new
chr19	18257097	18274509	chr19:18257097-18274509	1	-	18257179	18269478	789624	4	1009,3164,122,107,	0,7265,12368,17305,
#Partially deleted in new
chr19	18257097	18274487	chr19:18257097-18274487	3	-	18257179	18269478	789624	4	1009,2603,122,85,	0,7826,12368,17305,
#Partially deleted in new
chr19	18257097	18274500	chr19:18257097-18274500	1	-	18257179	18267401	789624	4	1009,2642,122,98,	0,7826,12368,17305,
#Deleted in new
chr19	18257098	18262618	chr19:18257098-18262618	0	-	18257098	18257098	8553170	1	5520,	0,
#Partially deleted in new
chr19	18267089	18274471	chr19:18267089-18274471	0	-	18267089	18269478	789624	3	437,126,69,	0,2376,7313,
#Partially deleted in new
chr19	18267118	18274411	chr19:18267118-18274411	0	-	18267118	18267401	789624	3	404,122,9,	0,2347,7284,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	18267335	18274430	chr19:18267335-18274430	0	-	18267335	18267401	789624	4	191,196,122,28,	0,436,2130,7067,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	18267378	18274430	chr19:18267378-18274430	0	-	18267378	18267401	789624	4	187,196,122,28,	0,393,2087,7024,
#Partially deleted in new
chr19	18279759	18281622	chr19:18279759-18281622	3	-	18280440	18281484	0	1	1863,	0,
#Partially deleted in new
chr19	18280018	18280929	chr19:18280018-18280929	0	-	18280018	18280929	789624	2	26,474,	0,437,
#Partially deleted in new
chr19	18282076	18282161	chr19:18282076-18282161	3	+	18282076	18282076	5263520	1	85,	0,
#Partially deleted in new
chr19	18285342	18285495	chr19:18285342-18285495	7	-	18285342	18285342	16724991	1	153,	0,
#Partially deleted in new
chr19	18306229	18323274	chr19:18306229-18323274	3	-	18307463	18323020	0	5	1326,184,99,42,257,	0,3448,6374,9794,16788,
#Partially deleted in new
chr19	18306906	18323071	chr19:18306906-18323071	1	-	18307463	18323020	789624	4	649,184,99,54,	0,2771,5697,16111,
#Partially deleted in new
chr19	18306915	18323060	chr19:18306915-18323060	0	-	18310148	18323020	789624	6	640,184,105,99,42,43,	0,2762,3194,5688,9108,16102,
#Partially deleted in new
chr19	18309290	18323112	chr19:18309290-18323112	0	-	18309290	18323020	789624	4	571,99,42,95,	0,3313,6733,13727,
#Partially deleted in new
chr19	18309750	18316259	chr19:18309750-18316259	0	-	18309750	18309750	8553170	3	111,99,236,	0,2853,6273,
#Partially deleted in new
chr19	18312168	18323097	chr19:18312168-18323097	0	-	18312168	18312168	8553170	3	534,42,80,	0,3855,10849,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	18333275	18333573	chr19:18333275-18333573	3	+	18333275	18333275	8553170	1	298,	0,
#Duplicated in new
chr19	18340586	18369950	chr19:18340586-18369950	3	+	18340681	18363583	789624	5	129,53,117,233,6560,	0,2272,15308,16796,22804,
#Partially deleted in new
chr19	18340597	18363678	chr19:18340597-18363678	1	+	18340681	18363509	789624	5	118,53,117,233,248,	0,2261,15297,16785,22833,
#Partially deleted in new
chr19	18340598	18357857	chr19:18340598-18357857	1	+	18340681	18357619	789624	4	117,53,117,475,	0,2260,15296,16784,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	18340608	18364342	chr19:18340608-18364342	1	+	18357409	18363583	789624	4	107,117,233,952,	0,15286,16774,22782,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	18340610	18363998	chr19:18340610-18363998	0	+	18340681	18355956	789624	6	105,53,121,117,233,608,	0,2248,8337,15284,16772,22780,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	18340613	18364218	chr19:18340613-18364218	0	+	18340681	18355956	789624	6	102,53,121,117,233,788,	0,2245,8334,15281,16769,22817,
#Partially deleted in new
chr19	18340638	18363688	chr19:18340638-18363688	1	+	18340681	18363522	789624	4	77,53,117,298,	0,2220,15256,22752,
#Partially deleted in new
chr19	18357477	18369930	chr19:18357477-18369930	0	+	18357477	18369898	789624	2	138,225,	0,12228,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	18374730	18386208	chr19:18374730-18386208	0	+	18386189	18386208	8553170	2	270,292,	0,11186,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	18374751	18386072	chr19:18374751-18386072	0	+	18374751	18374751	8553170	3	252,98,156,	0,7598,11165,
#Partially deleted in new
chr19	18382169	18388347	chr19:18382169-18388347	0	+	18386189	18388347	789624	3	278,550,62,	0,3747,6116,
#Partially deleted in new
chr19	18386157	18389176	chr19:18386157-18389176	3	+	18386189	18388935	0	2	309,891,	0,2128,
#Deleted in new
chr19	18386561	18386634	chr19:18386561-18386634	3	+	18386561	18386561	5263520	1	73,	0,
#Partially deleted in new
chr19	18386919	18388484	chr19:18386919-18388484	0	+	18386919	18386919	8553170	2	95,199,	0,1366,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	18391143	18397617	chr19:18391143-18397617	3	-	18391986	18396963	789624	2	982,1433,	0,5041,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	18391148	18397611	chr19:18391148-18397611	1	-	18391986	18396963	789624	3	977,788,159,	0,5036,6304,
#Partially deleted in new
chr19	18418863	18432214	chr19:18418863-18432214	0	+	18419024	18432214	789624	9	286,73,62,85,90,60,70,71,68,	0,8487,8888,9034,11977,12783,12929,13136,13283,
#Partially deleted in new
chr19	18419335	18434562	chr19:18419335-18434562	1	+	18419648	18434246	789624	17	372,73,62,85,90,60,70,71,68,46,36,55,71,79,29,108,346,	0,8015,8416,8562,11505,12311,12457,12664,12811,13223,13364,13493,13637,13799,14249,14374,14881,
#Partially deleted in new
chr19	18419354	18434562	chr19:18419354-18434562	3	+	18419648	18434246	789624	18	353,73,62,85,90,66,60,70,71,68,46,36,55,71,79,29,108,346,	0,7996,8397,8543,11486,11998,12292,12438,12645,12792,13204,13345,13474,13618,13780,14230,14355,14862,
#Partially deleted in new
chr19	18419425	18431838	chr19:18419425-18431838	0	+	18430867	18431838	789624	7	190,73,62,85,90,60,46,	0,7925,8326,8472,11415,12221,12367,
#Partially deleted in new
chr19	18419429	18432174	chr19:18419429-18432174	0	+	18419429	18419429	8553170	8	278,73,62,85,90,60,71,28,	0,7921,8322,8468,11411,12217,12570,12717,
#Partially deleted in new
chr19	18419605	18432023	chr19:18419605-18432023	0	+	18419648	18427930	789624	7	102,73,85,90,60,70,24,	0,7745,8292,11235,12041,12187,12394,
#Partially deleted in new
chr19	18419623	18431705	chr19:18419623-18431705	0	+	18419648	18426011	789624	7	84,175,73,62,85,90,59,	0,6285,7727,8128,8274,11217,12023,
#Partially deleted in new
chr19	18419648	18426011	chr19:18419648-18426011	1	+	18419648	18426011	789624	2	59,103,	0,6260,
#Partially deleted in new
chr19	18420102	18432579	chr19:18420102-18432579	0	+	18430867	18432579	789624	10	22,73,62,85,90,60,70,71,68,21,	0,7248,7649,7795,10738,11544,11690,11897,12044,12456,
#Partially deleted in new
chr19	18426039	18431862	chr19:18426039-18431862	0	+	18426039	18426039	8553170	8	44,73,62,85,90,66,60,70,	0,1311,1712,1858,4801,5313,5607,5753,
#Deleted in new
chr19	18431644	18433100	chr19:18431644-18433100	0	+	18431644	18431644	8553170	7	218,71,68,46,36,55,128,	0,355,502,914,1055,1184,1328,
#Deleted in new
chr19	18431812	18433043	chr19:18431812-18433043	0	+	18431812	18431812	8553170	6	50,71,68,177,55,71,	0,187,334,746,1016,1160,
#Deleted in new
chr19	18432066	18433652	chr19:18432066-18433652	0	+	18432066	18432066	8553170	8	4,68,46,36,55,71,79,68,	0,80,492,633,762,906,1068,1518,
#Deleted in new
chr19	18432199	18434562	chr19:18432199-18434562	0	+	18432199	18434281	789624	9	15,46,36,55,71,79,29,223,346,	0,359,500,629,773,935,1385,1510,2017,
#Deleted in new
chr19	18433274	18434562	chr19:18433274-18434562	1	+	18433535	18434246	789624	3	339,108,346,	0,435,942,
#Deleted in new
chr19	18434387	18438301	chr19:18434387-18438301	3	-	18434912	18437979	789624	11	730,218,114,165,216,150,194,133,162,129,209,	0,878,1175,1369,1644,1942,2296,2585,3211,3472,3705,
#Deleted in new
chr19	18434387	18438111	chr19:18434387-18438111	0	-	18436856	18437979	789624	8	730,218,114,165,216,150,194,252,	0,878,1175,1369,1644,1942,2296,3472,
#Deleted in new
chr19	18434808	18438167	chr19:18434808-18438167	1	-	18434912	18437979	789624	10	309,218,114,165,216,150,194,133,129,75,	0,457,754,948,1223,1521,1875,2164,3051,3284,
#Deleted in new
chr19	18434814	18435737	chr19:18434814-18435737	0	-	18434814	18434814	8553170	3	303,218,175,	0,451,748,
#Deleted in new
chr19	18434820	18437309	chr19:18434820-18437309	1	-	18434912	18437003	789624	8	297,218,114,165,216,150,194,337,	0,445,742,936,1211,1509,1863,2152,
#Deleted in new
chr19	18434820	18435902	chr19:18434820-18435902	0	-	18434912	18435902	789624	4	297,236,114,146,	0,427,742,936,
#Deleted in new
chr19	18434820	18438162	chr19:18434820-18438162	0	-	18436438	18437979	789624	10	297,218,114,165,216,150,133,162,129,70,	0,445,742,936,1211,1509,2152,2778,3039,3272,
#Deleted in new
chr19	18434821	18438164	chr19:18434821-18438164	0	-	18434821	18434821	8553170	9	296,218,114,165,216,776,162,129,72,	0,444,741,935,1210,1508,2777,3038,3271,
#Deleted in new
chr19	18434860	18438115	chr19:18434860-18438115	0	-	18436856	18437979	789624	9	257,218,114,165,216,150,194,129,23,	0,405,702,896,1171,1469,1823,2999,3232,
#Deleted in new
chr19	18435393	18436616	chr19:18435393-18436616	0	-	18435393	18435393	8553170	5	90,102,165,216,287,	0,169,363,638,936,
#Deleted in new
chr19	18435415	18435866	chr19:18435415-18435866	0	-	18435415	18435415	8553170	2	261,110,	0,341,
#Deleted in new
chr19	18436147	18438143	chr19:18436147-18438143	0	-	18436147	18437979	789624	5	100,150,162,129,51,	0,182,1451,1712,1945,
#Deleted in new
chr19	18436843	18438162	chr19:18436843-18438162	0	-	18436843	18437979	789624	4	34,133,390,70,	0,129,755,1249,
#Deleted in new
chr19	18436846	18438162	chr19:18436846-18438162	0	-	18436846	18437979	789624	4	31,133,162,303,	0,126,752,1013,
#Deleted in new
chr19	18441418	18443597	chr19:18441418-18443597	3	+	18441418	18441418	8553170	2	126,473,	0,1706,
#Partially deleted in new
chr19	18442662	18522127	chr19:18442662-18522127	3	-	18444751	18522055	0	12	2206,45,172,67,499,97,125,275,164,122,48,207,	0,2561,3646,4085,7814,8889,15542,18915,22749,23134,30172,79258,
#Partially deleted in new
chr19	18442664	18522116	chr19:18442664-18522116	0	-	18470993	18522055	789624	13	2204,45,172,67,499,97,125,275,164,122,60,48,196,	0,2559,3644,4083,7812,8887,15540,18913,22747,23132,28311,30170,79256,
#Deleted in new
chr19	18444515	18445399	chr19:18444515-18445399	0	-	18444515	18444515	8553170	2	353,176,	0,708,
#Partially deleted in new
chr19	18444750	18475933	chr19:18444750-18475933	1	-	18444751	18465481	789624	12	118,45,172,67,499,97,125,275,164,122,48,120,	0,473,1558,1997,5726,6801,13454,16827,20661,21046,28084,31063,
#Partially deleted in new
chr19	18446145	18450526	chr19:18446145-18450526	0	-	18446145	18446145	8553170	3	335,67,50,	0,602,4331,
#Deleted in new
chr19	18448274	18448802	chr19:18448274-18448802	3	+	18448274	18448274	8553170	1	528,	0,
#Deleted in new
chr19	18448274	18448805	chr19:18448274-18448805	3	-	18448274	18448274	8553170	1	531,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	18472406	18522067	chr19:18472406-18522067	0	-	18472406	18472406	8553170	2	476,147,	0,49514,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	18531612	18532632	chr19:18531612-18532632	3	+	18531612	18531612	8553170	2	156,196,	0,824,
#Partially deleted in new
chr19	18531750	18543577	chr19:18531750-18543577	1	-	18532168	18541970	0	9	505,132,78,173,221,89,170,317,96,	0,913,1519,5850,6465,7620,7800,9928,11731,
#Partially deleted in new
chr19	18531751	18543573	chr19:18531751-18543573	0	-	18532182	18541970	789624	6	504,132,78,173,317,88,	0,912,1518,5849,9927,11734,
#Partially deleted in new
chr19	18531761	18543524	chr19:18531761-18543524	1	-	18532168	18541970	0	9	494,132,78,173,218,89,170,317,39,	0,902,1508,5839,6454,7609,7789,9917,11724,
#Partially deleted in new
chr19	18531761	18542972	chr19:18531761-18542972	1	-	18532168	18541970	0	9	494,132,78,173,218,89,170,317,85,	0,902,1508,5839,6454,7609,7789,9917,11126,
#Partially deleted in new
chr19	18531761	18543660	chr19:18531761-18543660	3	-	18532168	18541970	0	9	494,132,78,173,221,89,170,317,175,	0,902,1508,5839,6454,7609,7789,9917,11724,
#Partially deleted in new
chr19	18531813	18543577	chr19:18531813-18543577	0	-	18539400	18541970	789624	8	442,132,78,173,221,89,317,96,	0,850,1456,5787,6402,7557,9865,11668,
#Partially deleted in new
chr19	18532104	18538371	chr19:18532104-18538371	0	-	18532168	18538371	789624	4	151,132,173,156,	0,559,5496,6111,
#Partially deleted in new
chr19	18532128	18537704	chr19:18532128-18537704	0	-	18532685	18537704	789624	4	127,151,78,104,	0,535,1141,5472,
#Partially deleted in new
chr19	18532907	18536188	chr19:18532907-18536188	3	+	18532907	18532907	8553170	2	237,203,	0,3078,
#Partially deleted in new
chr19	18538075	18539448	chr19:18538075-18539448	0	-	18538075	18538075	8553170	2	361,78,	0,1295,
#Partially deleted in new
chr19	18538215	18544077	chr19:18538215-18544077	0	-	18538215	18541970	789624	5	221,89,170,317,169,	0,1155,1335,3463,5693,
#Partially deleted in new
chr19	18538375	18542498	chr19:18538375-18542498	0	-	18538375	18541970	789624	4	61,89,170,820,	0,995,1175,3303,
#Partially deleted in new
chr19	18539418	18543245	chr19:18539418-18543245	0	-	18539418	18541970	789624	4	41,170,317,65,	0,132,2260,3762,
#Partially deleted in new
chr19	18539431	18543483	chr19:18539431-18543483	0	-	18539431	18541970	789624	4	28,170,317,59,	0,119,2247,3993,
#Partially deleted in new
chr19	18541901	18544058	chr19:18541901-18544058	0	-	18541901	18541970	789624	2	70,150,	0,2007,
#Partially deleted in new
chr19	18557761	18569387	chr19:18557761-18569387	1	+	18562056	18568631	789624	5	188,122,153,47,986,	0,4274,7107,9370,10640,
#Partially deleted in new
chr19	18557761	18569387	chr19:18557761-18569387	3	+	18562056	18568631	789624	6	153,131,122,153,47,986,	0,2658,4274,7107,9370,10640,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	18557774	18561560	chr19:18557774-18561560	3	-	18557774	18557774	8553170	2	1869,132,	0,3654,
#Partially deleted in new
chr19	18557787	18569378	chr19:18557787-18569378	1	+	18562056	18568631	789624	5	127,122,153,47,977,	0,4248,7081,9344,10614,
#Partially deleted in new
chr19	18557805	18568495	chr19:18557805-18568495	0	+	18562056	18568495	789624	6	109,131,122,153,47,94,	0,2614,4230,7063,9326,10596,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	18557837	18559786	chr19:18557837-18559786	0	+	18557837	18557837	8553170	3	77,113,206,	0,1335,1743,
#Partially deleted in new
chr19	18557875	18569310	chr19:18557875-18569310	1	+	18562056	18568631	789624	6	39,122,153,57,47,909,	0,4160,6993,7258,9256,10526,
#Partially deleted in new
chr19	18557878	18567318	chr19:18557878-18567318	1	+	18562056	18567264	789624	4	36,122,153,187,	0,4157,6990,9253,
#Partially deleted in new
chr19	18557887	18569297	chr19:18557887-18569297	1	+	18562056	18568631	789624	6	27,122,153,47,278,468,	0,4148,6981,9244,10514,10942,
#Partially deleted in new
chr19	18557891	18569091	chr19:18557891-18569091	0	+	18562056	18568631	789624	6	23,122,153,47,288,262,	0,4144,6977,9240,10510,10938,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	18557897	18564990	chr19:18557897-18564990	0	+	18562056	18564990	789624	4	17,451,122,122,	0,2202,4138,6971,
#Partially deleted in new
chr19	18558538	18568720	chr19:18558538-18568720	1	+	18562056	18568631	789624	5	66,122,153,47,319,	0,3497,6330,8593,9863,
#Partially deleted in new
chr19	18558653	18568601	chr19:18558653-18568601	0	+	18562056	18568601	789624	5	113,122,153,47,200,	0,3382,6215,8478,9748,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	18558826	18562072	chr19:18558826-18562072	0	+	18562056	18562072	8553170	2	304,37,	0,3209,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	18559111	18569378	chr19:18559111-18569378	1	+	18562056	18568631	789624	5	1439,122,153,47,977,	0,2924,5757,8020,9290,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	18561519	18567272	chr19:18561519-18567272	1	+	18562056	18567264	789624	3	638,153,141,	0,3349,5612,
#Partially deleted in new
chr19	18561779	18568509	chr19:18561779-18568509	0	+	18562056	18568509	789624	4	378,153,47,108,	0,3089,5352,6622,
#Partially deleted in new
chr19	18562090	18568698	chr19:18562090-18568698	0	+	18562090	18568438	789624	3	67,153,297,	0,2778,6311,
#Deleted in new
chr19	18568505	18569375	chr19:18568505-18569375	3	-	18568505	18568505	8553170	2	286,146,	0,724,
#Partially deleted in new
chr19	18571729	18575202	chr19:18571729-18575202	1	+	18573300	18575150	0	5	107,111,87,103,146,	0,1563,1932,3140,3327,
#Partially deleted in new
chr19	18571801	18575241	chr19:18571801-18575241	1	+	18573300	18575150	0	5	86,111,87,103,185,	0,1491,1860,3068,3255,
#Partially deleted in new
chr19	18571857	18573790	chr19:18571857-18573790	0	+	18571857	18571857	8553170	2	52,498,	0,1435,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	18571859	18577550	chr19:18571859-18577550	3	+	18573300	18575150	0	5	50,111,87,103,2494,	0,1433,1802,3010,3197,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	18571878	18573748	chr19:18571878-18573748	0	+	18573300	18573748	789624	3	729,111,87,	0,1414,1783,
#Partially deleted in new
chr19	18571881	18575234	chr19:18571881-18575234	1	+	18573300	18575150	0	5	264,111,87,103,178,	0,1411,1780,2988,3175,
#Partially deleted in new
chr19	18571926	18575170	chr19:18571926-18575170	1	+	18573300	18575150	0	5	253,111,87,103,114,	0,1366,1735,2943,3130,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	18572219	18594435	chr19:18572219-18594435	0	-	18572219	18572219	8553170	3	788,43,189,	0,11350,22027,
#Partially deleted in new
chr19	18572739	18575241	chr19:18572739-18575241	1	+	18573300	18575150	0	5	221,111,87,103,185,	0,553,922,2130,2317,
#Partially deleted in new
chr19	18573264	18575241	chr19:18573264-18575241	1	+	18573300	18575150	0	4	139,87,103,185,	0,397,1605,1792,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	18573284	18577290	chr19:18573284-18577290	1	+	18573300	18575150	0	5	119,87,103,95,288,	0,377,1585,1772,3718,
#Partially deleted in new
chr19	18573354	18575241	chr19:18573354-18575241	0	+	18573354	18575150	789624	3	49,87,372,	0,307,1515,
#Partially deleted in new
chr19	18573375	18575241	chr19:18573375-18575241	0	+	18573375	18575229	789624	4	28,87,103,139,	0,286,1494,1727,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	18588684	18592334	chr19:18588684-18592334	0	+	18588684	18588684	8553170	4	216,689,660,227,	0,310,1589,3423,
#Partially deleted in new
chr19	18588724	18592336	chr19:18588724-18592336	1	+	18588801	18592180	789624	5	176,83,271,80,229,	0,270,688,2129,3383,
#Partially deleted in new
chr19	18588795	18592336	chr19:18588795-18592336	3	+	18588801	18592180	789624	5	105,83,205,80,229,	0,199,683,2058,3312,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	18588797	18592336	chr19:18588797-18592336	0	+	18588797	18588797	8553170	3	103,689,1483,	0,197,2056,
#Partially deleted in new
chr19	18588801	18592336	chr19:18588801-18592336	0	+	18588801	18590872	789624	4	99,83,80,229,	0,193,2052,3306,
#Partially deleted in new
chr19	18588808	18592327	chr19:18588808-18592327	0	+	18588808	18588808	8553170	4	92,689,80,220,	0,186,2045,3299,
#Partially deleted in new
chr19	18589601	18592336	chr19:18589601-18592336	0	+	18589601	18592107	789624	3	82,80,248,	0,1252,2487,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	18589871	18592336	chr19:18589871-18592336	0	+	18589871	18589871	8553170	1	2465,	0,
#Partially deleted in new
chr19	18593236	18606850	chr19:18593236-18606850	3	-	18593565	18606656	789624	9	343,43,188,169,158,170,130,282,309,	0,828,1010,3385,3655,5195,5535,6328,13305,
#Deleted in new
chr19	18593236	18594134	chr19:18593236-18594134	0	-	18593236	18593236	8553170	2	343,70,	0,828,
#Partially deleted in new
chr19	18594361	18598593	chr19:18594361-18598593	0	-	18594361	18598593	789624	4	73,127,158,162,	0,2302,2530,4070,
#Partially deleted in new
chr19	18599699	18607741	chr19:18599699-18607741	0	-	18599699	18599699	8553170	2	147,367,	0,7675,
#Partially deleted in new
chr19	18607429	18621039	chr19:18607429-18621039	3	+	18612958	18620536	789624	9	77,279,145,92,153,103,118,118,632,	0,5421,6442,6674,8545,9570,10725,10945,12978,
#Partially deleted in new
chr19	18612871	18621033	chr19:18612871-18621033	1	+	18612958	18620536	789624	8	258,145,92,153,103,118,118,626,	0,1000,1232,3103,4128,5283,5503,7536,
#Partially deleted in new
chr19	18612872	18617909	chr19:18612872-18617909	0	+	18612872	18612872	8553170	5	257,145,92,153,910,	0,999,1231,3102,4127,
#Partially deleted in new
chr19	18612876	18621006	chr19:18612876-18621006	0	+	18612876	18612876	8553170	7	253,145,92,153,103,338,599,	0,995,1227,3098,4123,5278,7531,
#Partially deleted in new
chr19	18615975	18618454	chr19:18615975-18618454	0	+	18615975	18618454	789624	4	152,103,68,80,	0,1024,2179,2399,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	18631645	18631908	chr19:18631645-18631908	3	-	18631645	18631645	8553170	1	263,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	18636964	18671714	chr19:18636964-18671714	3	+	18637054	18669245	789624	3	173,183,4051,	0,27296,30699,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	18637024	18667626	chr19:18637024-18667626	1	+	18637054	18667443	789624	3	113,183,226,	0,27236,30376,
#Partially deleted in new
chr19	18637027	18669798	chr19:18637027-18669798	1	+	18637054	18669274	789624	4	110,183,139,557,	0,27233,30636,32214,
#Partially deleted in new
chr19	18637027	18667849	chr19:18637027-18667849	0	+	18637054	18659744	789624	4	110,98,183,186,	0,22659,27233,30636,
#Partially deleted in new
chr19	18637056	18667866	chr19:18637056-18667866	0	+	18637056	18667866	789624	3	81,183,290,	0,27204,30520,
#Partially deleted in new
chr19	18644637	18667992	chr19:18644637-18667992	0	+	18644637	18644637	8553170	3	29,183,329,	0,19623,23026,
#Partially deleted in new
chr19	18683676	18777952	chr19:18683676-18777952	3	+	18683702	18777382	789624	14	152,117,138,62,95,86,41,221,125,309,105,87,181,782,	0,59233,62146,63376,66104,69823,75874,76331,81727,84808,87765,91223,91964,93494,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	18683677	18782333	chr19:18683677-18782333	1	+	18683702	18777382	789624	15	151,117,48,138,62,95,86,41,221,125,309,105,87,181,5163,	0,59232,60430,62145,63375,66103,69822,75873,76330,81726,84807,87764,91222,91963,93493,
#Partially deleted in new
chr19	18735608	18777952	chr19:18735608-18777952	1	+	18735640	18777382	789624	14	35,117,138,62,95,86,41,221,125,309,105,87,181,782,	0,7301,10214,11444,14172,17891,23942,24399,29795,32876,35833,39291,40032,41562,
#Partially deleted in new
chr19	18742909	18777938	chr19:18742909-18777938	1	+	18743008	18777382	789624	10	117,138,62,95,86,41,221,125,181,768,	0,2913,4143,6871,10590,16641,17098,22494,32731,34261,
#Partially deleted in new
chr19	18782772	18791314	chr19:18782772-18791314	3	-	18782914	18791269	0	19	189,140,173,197,49,179,182,53,119,160,108,105,159,75,138,173,52,86,124,	0,281,1418,2123,2725,2900,3192,3466,3759,4718,5439,5637,5819,6066,6387,7169,7789,8077,8418,
#Partially deleted in new
chr19	18782772	18791305	chr19:18782772-18791305	1	-	18782914	18790915	789624	18	189,140,173,197,49,179,182,53,119,160,108,105,159,75,138,173,52,456,	0,281,1418,2123,2725,2900,3192,3466,3759,4718,5439,5637,5819,6066,6387,7169,7789,8077,
#Partially deleted in new
chr19	18782773	18791305	chr19:18782773-18791305	1	-	18782914	18791269	0	18	188,140,173,197,49,179,182,53,119,160,108,105,159,54,173,52,86,115,	0,280,1417,2122,2724,2899,3191,3465,3758,4717,5438,5636,5818,6065,7168,7788,8076,8417,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	18786117	18787035	chr19:18786117-18787035	0	-	18786117	18786117	8553170	3	29,53,504,	0,121,414,
#Partially deleted in new
chr19	18831937	18868236	chr19:18831937-18868236	3	+	18832209	18866163	0	24	503,140,90,168,181,162,85,99,109,160,119,165,115,144,214,118,157,143,175,82,162,218,123,1716,	0,14042,15806,18137,18750,20197,21049,21314,22663,22941,23186,23987,24248,24939,25382,28383,28888,30072,31500,32232,33351,33623,34106,34583,
#Partially deleted in new
chr19	18832000	18868229	chr19:18832000-18868229	1	+	18832209	18866163	0	24	440,140,90,168,181,162,118,99,109,160,119,165,115,144,214,118,157,143,175,82,162,218,123,1709,	0,13979,15743,18074,18687,20134,20986,21251,22600,22878,23123,23924,24185,24876,25319,28320,28825,30009,31437,32169,33288,33560,34043,34520,
#Partially deleted in new
chr19	18833129	18850691	chr19:18833129-18850691	0	+	18833129	18833129	8553170	5	154,140,90,168,4,	0,12850,14614,16945,17558,
#Deleted in new
chr19	18848132	18850776	chr19:18848132-18850776	0	+	18848132	18848132	8553170	3	302,168,89,	0,1942,2555,
#Deleted in new
chr19	18849007	18852182	chr19:18849007-18852182	0	+	18849007	18849007	8553170	5	24,168,181,80,48,	0,1067,1680,2042,3127,
#Deleted in new
chr19	18849007	18852296	chr19:18849007-18852296	0	+	18849007	18849007	8553170	4	69,168,181,162,	0,1067,1680,3127,
#Deleted in new
chr19	18849081	18852236	chr19:18849081-18852236	0	+	18849081	18849081	8553170	4	100,168,181,102,	0,993,1606,3053,
#Deleted in new
chr19	18849165	18852254	chr19:18849165-18852254	0	+	18849165	18849165	8553170	4	281,168,181,120,	0,909,1522,2969,
#Deleted in new
chr19	18849812	18852194	chr19:18849812-18852194	0	+	18849812	18849812	8553170	4	173,168,181,60,	0,262,875,2322,
#Deleted in new
chr19	18852997	18855157	chr19:18852997-18855157	0	+	18852997	18852997	8553170	4	74,99,109,279,	0,254,1603,1881,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	18854912	18855680	chr19:18854912-18855680	0	+	18854912	18854912	8553170	2	126,557,	0,211,
#Partially deleted in new
chr19	18859382	18868229	chr19:18859382-18868229	0	+	18859382	18859382	8553170	9	1056,157,143,175,82,162,218,123,1709,	0,1443,2627,4055,4787,5906,6178,6661,7138,
#Partially deleted in new
chr19	18862932	18868229	chr19:18862932-18868229	0	+	18862932	18862932	8553170	5	680,82,490,123,1709,	0,1237,2356,3111,3588,
#Partially deleted in new
chr19	18868544	18896096	chr19:18868544-18896096	3	-	18868596	18870307	789624	8	846,637,110,148,162,181,160,273,	0,1438,10385,10696,11729,15542,24871,27279,
#Partially deleted in new
chr19	18868544	18896096	chr19:18868544-18896096	3	-	18870576	18896072	789624	8	846,637,110,148,162,181,160,273,	0,1438,10385,10696,11729,15542,24871,27279,
#Partially deleted in new
chr19	18868551	18896144	chr19:18868551-18896144	1	-	18868596	18870307	789624	8	839,637,110,148,162,181,160,321,	0,1431,10378,10689,11722,15535,24864,27272,
#Partially deleted in new
chr19	18877908	18896135	chr19:18877908-18896135	1	-	18878925	18896072	789624	6	1131,148,162,181,160,312,	0,1332,2365,6178,15507,17915,
#Partially deleted in new
chr19	18877910	18896727	chr19:18877910-18896727	1	-	18878925	18893530	789624	6	1129,148,162,181,160,167,	0,1330,2363,6176,15505,18650,
#Partially deleted in new
chr19	18877916	18884233	chr19:18877916-18884233	0	-	18878016	18884233	789624	5	182,110,148,162,147,	0,1013,1324,2357,6170,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	18881679	18883376	chr19:18881679-18883376	3	+	18881679	18881679	8553170	2	393,290,	0,1407,
#Partially deleted in new
chr19	18899513	18919397	chr19:18899513-18919397	3	-	18899678	18919348	789624	10	213,75,69,156,82,54,153,101,63,175,	0,359,867,3754,5257,6062,7446,11457,13470,19709,
#Partially deleted in new
chr19	18899513	18899937	chr19:18899513-18899937	0	-	18899513	18899513	8553170	2	196,65,	0,359,
#Partially deleted in new
chr19	18899516	18919363	chr19:18899516-18919363	1	-	18899678	18919348	789624	9	210,75,69,82,54,153,101,63,141,	0,356,864,5254,6059,7443,11454,13467,19706,
#Partially deleted in new
chr19	18899528	18903300	chr19:18899528-18903300	0	-	18899528	18899528	8553170	4	198,134,69,33,	0,344,852,3739,
#Partially deleted in new
chr19	18899562	18919380	chr19:18899562-18919380	1	-	18899678	18919348	789624	11	164,75,69,156,82,54,69,153,101,63,158,	0,310,818,3705,5208,6013,6304,7397,11408,13421,19660,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	18899566	18913046	chr19:18899566-18913046	0	-	18899566	18899566	8553170	8	160,75,69,156,82,660,505,63,	0,306,814,3701,5204,6009,11000,13417,
#Partially deleted in new
chr19	18899572	18919375	chr19:18899572-18919375	1	-	18899678	18919348	789624	9	154,75,69,156,82,54,101,63,153,	0,300,808,3695,5198,6003,11398,13411,19650,
#Partially deleted in new
chr19	18899890	18919377	chr19:18899890-18919377	0	-	18903272	18919348	789624	6	57,69,156,101,63,155,	0,490,3377,11080,13093,19332,
#Partially deleted in new
chr19	18906598	18913046	chr19:18906598-18913046	0	-	18906598	18906598	8553170	3	514,101,63,	0,4372,6385,
#Partially deleted in new
chr19	18907012	18934397	chr19:18907012-18934397	0	-	18931588	18934397	789624	6	100,63,87,117,122,95,	0,5971,24312,24496,25911,27290,
#Partially deleted in new
chr19	18907012	18934397	chr19:18907012-18934397	3	-	18931588	18934397	789624	7	100,101,63,87,117,122,95,	0,3958,5971,24312,24496,25911,27290,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	18910554	18919365	chr19:18910554-18919365	0	-	18910554	18910554	8553170	3	662,63,143,	0,2429,8668,
#Partially deleted in new
chr19	18911026	18919354	chr19:18911026-18919354	0	-	18911026	18911026	8553170	3	347,63,132,	0,1957,8196,
#Partially deleted in new
chr19	18919674	18928627	chr19:18919674-18928627	3	+	18919741	18928316	789624	13	182,124,86,122,188,141,76,77,98,75,89,72,500,	0,905,1988,2168,2651,2929,4558,4948,5207,6628,8091,8290,8453,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	18919674	18928633	chr19:18919674-18928633	1	+	18919741	18921942	789624	14	182,124,76,86,122,188,141,76,77,98,75,89,72,506,	0,905,1159,1988,2168,2651,2929,4558,4948,5207,6628,8091,8290,8453,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	18919714	18922507	chr19:18919714-18922507	0	+	18919741	18921715	789624	6	142,124,65,86,122,182,	0,865,1130,1948,2128,2611,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	18919714	18922092	chr19:18919714-18922092	0	+	18919714	18919714	8553170	4	142,124,76,430,	0,865,1119,1948,
#Partially deleted in new
chr19	18919714	18921979	chr19:18919714-18921979	0	+	18919714	18919714	8553170	3	142,124,317,	0,865,1948,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	18919726	18928626	chr19:18919726-18928626	0	+	18919741	18921942	789624	14	130,124,76,86,122,188,141,76,77,127,75,89,72,499,	0,853,1107,1936,2116,2599,2877,4506,4896,5126,6576,8039,8238,8401,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	18919727	18922416	chr19:18919727-18922416	0	+	18919741	18920661	789624	6	129,53,76,86,122,91,	0,923,1106,1935,2115,2598,
#Partially deleted in new
chr19	18919728	18924282	chr19:18919728-18924282	0	+	18919741	18921942	789624	6	128,124,122,188,141,50,	0,851,2114,2597,2875,4504,
#Partially deleted in new
chr19	18919737	18928622	chr19:18919737-18928622	0	+	18919741	18920661	789624	13	119,53,86,122,188,141,76,77,98,75,89,72,495,	0,913,1925,2105,2588,2866,4495,4885,5144,6565,8028,8227,8390,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	18921746	18925188	chr19:18921746-18925188	0	+	18921746	18921746	8553170	4	767,141,76,566,	0,857,2486,2876,
#Partially deleted in new
chr19	18922331	18927843	chr19:18922331-18927843	0	+	18922331	18922331	8553170	7	182,47,76,77,98,75,78,	0,366,1901,2291,2550,3971,5434,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	18922709	18925185	chr19:18922709-18925185	0	+	18922709	18922709	8553170	5	35,76,77,98,56,	0,1523,1913,2172,2420,
#Partially deleted in new
chr19	18924652	18928335	chr19:18924652-18928335	0	+	18924652	18924652	8553170	5	327,75,89,72,208,	0,1650,3113,3312,3475,
#Deleted in new
chr19	18927743	18928538	chr19:18927743-18928538	0	+	18927743	18927743	8553170	3	111,72,411,	0,221,384,
#Partially deleted in new
chr19	18929200	18940352	chr19:18929200-18940352	1	-	18929442	18938982	0	10	425,87,117,157,122,108,132,157,81,32,	0,2124,2308,2775,3723,5102,9152,9527,9768,11120,
#Partially deleted in new
chr19	18929202	18939049	chr19:18929202-18939049	1	-	18929442	18938982	0	9	423,87,117,157,122,108,132,157,81,	0,2122,2306,2773,3721,5100,9150,9525,9766,
#Partially deleted in new
chr19	18929202	18941214	chr19:18929202-18941214	3	-	18929442	18938982	0	10	432,87,117,157,122,108,132,157,81,164,	0,2122,2306,2773,3721,5100,9150,9525,9766,11848,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	18929202	18939635	chr19:18929202-18939635	1	-	18929442	18938982	0	9	432,87,117,157,122,108,132,157,667,	0,2122,2306,2773,3721,5100,9150,9525,9766,
#Partially deleted in new
chr19	18929205	18941190	chr19:18929205-18941190	1	-	18929442	18938982	789624	6	429,87,117,49,81,140,	0,2119,2303,2770,9763,11845,
#Partially deleted in new
chr19	18929438	18938982	chr19:18929438-18938982	1	-	18929442	18938982	0	8	196,87,117,157,122,132,157,14,	0,1886,2070,2537,3485,8914,9289,9530,
#Partially deleted in new
chr19	18929442	18940304	chr19:18929442-18940304	1	-	18929442	18938982	0	10	192,87,117,157,122,108,132,157,81,454,	0,1882,2066,2533,3481,4860,8910,9285,9526,10408,
#Partially deleted in new
chr19	18931239	18933047	chr19:18931239-18933047	0	-	18931239	18931239	8553170	4	172,117,157,124,	0,269,736,1684,
#Partially deleted in new
chr19	18931585	18941261	chr19:18931585-18941261	0	-	18931585	18938982	789624	8	40,157,122,108,132,157,81,69,	0,390,1338,2717,6767,7142,7383,9607,
#Partially deleted in new
chr19	18933004	18941122	chr19:18933004-18941122	0	-	18933004	18938982	789624	7	41,108,132,157,81,84,72,	0,1298,5348,5723,5964,7316,8046,
#Partially deleted in new
chr19	18938388	18939027	chr19:18938388-18939027	0	-	18938388	18938388	8553170	2	496,59,	0,580,
#Partially deleted in new
chr19	18938398	18940766	chr19:18938398-18940766	0	-	18938398	18938982	789624	4	86,157,81,446,	0,329,570,1922,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	18940321	18946831	chr19:18940321-18946831	3	+	18940321	18940321	789624	3	303,148,506,	0,5759,6004,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	18957956	18958258	chr19:18957956-18958258	3	-	18957956	18957956	8553170	1	302,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	18990887	19033499	chr19:18990887-19033499	1	-	18994365	19031071	0	11	2853,121,137,62,479,112,488,121,1608,132,63,	0,3478,4256,10725,13280,17429,18967,28221,33731,40063,42549,
#Partially deleted in new
chr19	18990887	19001674	chr19:18990887-19001674	0	-	18995243	19001674	789624	6	262,103,121,137,62,62,	0,2750,3478,4256,8036,10725,
#Partially deleted in new
chr19	18990889	19033816	chr19:18990889-19033816	0	-	18994992	19031071	0	12	260,93,915,62,106,217,112,488,121,1608,132,55,	0,2758,3476,10723,13278,13540,17427,18965,28219,33729,40061,42872,
#Partially deleted in new
chr19	18990892	19033490	chr19:18990892-19033490	0	-	18994365	19031071	0	13	257,214,121,137,62,106,217,112,488,121,1608,132,54,	0,447,3473,4251,10720,13275,13537,17424,18962,28216,33726,40058,42544,
#Partially deleted in new
chr19	18990892	19033559	chr19:18990892-19033559	3	-	18994365	19031071	0	11	257,121,137,62,479,112,488,121,1608,132,123,	0,3473,4251,10720,13275,17424,18962,28216,33726,40058,42544,
#Partially deleted in new
chr19	18990892	18991618	chr19:18990892-18991618	0	-	18990892	18990892	8553170	2	257,279,	0,447,
#Partially deleted in new
chr19	18990892	18993442	chr19:18990892-18993442	0	-	18990892	18990892	8553170	2	257,166,	0,2384,
#Partially deleted in new
chr19	18991267	18993713	chr19:18991267-18993713	0	-	18991267	18991267	8553170	2	475,76,	0,2370,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	18992366	19033496	chr19:18992366-19033496	0	-	19007371	19031071	789624	12	1374,915,62,113,479,101,112,488,121,1608,132,60,	0,1999,9246,11129,11801,14980,15950,17488,26742,32252,38584,41070,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	18992366	19034023	chr19:18992366-19034023	1	-	18994365	19031071	0	10	2120,137,62,479,112,488,121,1608,157,262,	0,2777,9246,11801,15950,17488,26742,32252,38584,41395,
#Partially deleted in new
chr19	18992924	19033539	chr19:18992924-19033539	1	-	18994365	19033519	789624	10	1562,137,62,479,112,488,121,1608,132,51,	0,2219,8688,11243,15392,16930,26184,31694,38026,40564,
#Partially deleted in new
chr19	18993461	19004269	chr19:18993461-19004269	0	-	19003513	19004269	789624	6	279,121,137,62,113,102,	0,904,1682,8151,10034,10706,
#Partially deleted in new
chr19	18994597	19031030	chr19:18994597-19031030	0	-	19025397	19031030	789624	9	683,62,479,112,488,121,838,372,80,	0,7015,9570,13719,15257,24511,30021,31257,36353,
#Partially deleted in new
chr19	19025556	19033530	chr19:19025556-19033530	0	-	19025556	19025556	8553170	2	670,94,	0,7880,
#Partially deleted in new
chr19	19026013	19033434	chr19:19026013-19033434	0	-	19026013	19031071	789624	3	213,132,387,	0,4937,7034,
#Partially deleted in new
chr19	19033574	19058178	chr19:19033574-19058178	3	+	19042756	19057628	789624	8	356,167,83,574,170,132,138,763,	0,9136,10417,18047,20577,21690,22216,23841,
#Partially deleted in new
chr19	19033577	19058178	chr19:19033577-19058178	1	+	19034209	19057628	789624	9	353,108,167,83,574,170,132,138,763,	0,553,9133,10414,18044,20574,21687,22213,23838,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	19033584	19052187	chr19:19033584-19052187	0	+	19042756	19052187	789624	5	346,156,167,83,566,	0,3967,9126,10407,18037,
#Partially deleted in new
chr19	19033609	19058159	chr19:19033609-19058159	1	+	19042756	19057628	789624	8	404,167,83,574,170,132,138,744,	0,9101,10382,18012,20542,21655,22181,23806,
#Partially deleted in new
chr19	19033609	19051832	chr19:19033609-19051832	0	+	19034209	19051832	789624	5	52,47,167,83,211,	0,582,9101,10382,18012,
#Partially deleted in new
chr19	19033612	19059501	chr19:19033612-19059501	1	+	19051621	19057628	789624	7	318,574,170,132,138,243,239,	0,18009,20539,21652,22178,23803,25650,
#Partially deleted in new
chr19	19033613	19051902	chr19:19033613-19051902	0	+	19042756	19051902	789624	5	317,108,162,83,281,	0,517,9102,10378,18008,
#Partially deleted in new
chr19	19033620	19051629	chr19:19033620-19051629	0	+	19042756	19051629	789624	4	310,162,83,8,	0,9095,10371,18001,
#Partially deleted in new
chr19	19033634	19052195	chr19:19033634-19052195	0	+	19042756	19052195	789624	4	379,162,83,574,	0,9081,10357,17987,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	19033639	19052068	chr19:19033639-19052068	0	+	19034209	19037666	789624	6	291,108,156,167,83,447,	0,491,3912,9071,10352,17982,
#Partially deleted in new
chr19	19033822	19055324	chr19:19033822-19055324	0	+	19042756	19051632	789624	5	108,167,574,170,60,	0,8888,17799,20329,21442,
#Partially deleted in new
chr19	19033860	19052090	chr19:19033860-19052090	0	+	19051621	19052090	789624	2	153,469,	0,17761,
#Partially deleted in new
chr19	19034102	19057881	chr19:19034102-19057881	1	+	19034209	19057628	789624	8	136,167,83,574,170,132,138,466,	0,8608,9889,17519,20049,21162,21688,23313,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	19034200	19051735	chr19:19034200-19051735	0	+	19034209	19042791	789624	5	38,103,167,83,114,	0,6489,8510,9791,17421,
#Partially deleted in new
chr19	19054230	19057954	chr19:19054230-19057954	0	+	19054230	19057628	789624	3	91,132,539,	0,1034,3185,
#Partially deleted in new
chr19	19054308	19058135	chr19:19054308-19058135	0	+	19054308	19057495	789624	4	13,132,187,720,	0,956,1482,3107,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	19055897	19060311	chr19:19055897-19060311	0	+	19055897	19057628	789624	3	31,243,1046,	0,1518,3368,
#Partially deleted in new
chr19	19063998	19112888	chr19:19063998-19112888	3	+	19096124	19110876	789624	8	117,115,106,26,167,117,152,2320,	0,32092,37782,40914,41562,42270,43895,46570,
#Partially deleted in new
chr19	19064017	19106450	chr19:19064017-19106450	0	+	19064017	19064017	8553170	5	29,115,26,167,182,	0,32073,40895,41543,42251,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	19095942	19106934	chr19:19095942-19106934	0	+	19095942	19095942	8553170	5	263,106,26,167,666,	0,5838,8970,9618,10326,
#Partially deleted in new
chr19	19101780	19107988	chr19:19101780-19107988	0	+	19101780	19101780	8553170	3	106,117,95,	0,4488,6113,
#Partially deleted in new
chr19	19101794	19105234	chr19:19101794-19105234	0	+	19101794	19101794	8553170	2	92,322,	0,3118,
#Partially deleted in new
chr19	19105862	19110646	chr19:19105862-19110646	0	+	19105862	19105862	8553170	3	523,152,78,	0,2031,4706,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	19119168	19138466	chr19:19119168-19138466	1	-	19119929	19138428	789624	10	1015,97,175,114,144,61,98,81,104,41,	0,1596,1823,2139,2356,2590,13488,13961,15615,19257,
#Partially deleted in new
chr19	19119614	19138493	chr19:19119614-19138493	3	-	19119929	19138428	789624	12	569,97,175,114,144,61,152,157,98,81,104,68,	0,1150,1377,1693,1910,2144,10541,12737,13042,13515,15169,18811,
#Partially deleted in new
chr19	19119614	19138493	chr19:19119614-19138493	0	-	19119614	19119614	8553170	11	569,97,175,361,61,152,157,98,81,104,68,	0,1150,1377,1693,2144,10541,12737,13042,13515,15169,18811,
#Partially deleted in new
chr19	19119639	19138462	chr19:19119639-19138462	0	-	19121092	19138428	789624	12	544,97,175,104,144,61,152,157,98,81,104,37,	0,1125,1352,1678,1885,2119,10516,12712,13017,13490,15144,18786,
#Partially deleted in new
chr19	19119648	19138462	chr19:19119648-19138462	0	-	19119648	19119648	8553170	10	535,97,175,114,144,61,152,403,81,37,	0,1116,1343,1659,1876,2110,10507,12703,13481,18777,
#Partially deleted in new
chr19	19119659	19138447	chr19:19119659-19138447	1	-	19119929	19138428	789624	12	524,97,175,114,144,61,152,82,98,81,104,22,	0,1105,1332,1648,1865,2099,10496,12692,12997,13470,15124,18766,
#Deleted in new
chr19	19119737	19120975	chr19:19119737-19120975	0	-	19119737	19119737	8553170	2	446,211,	0,1027,
#Partially deleted in new
chr19	19120991	19132401	chr19:19120991-19132401	0	-	19120991	19132401	789624	5	175,144,61,152,50,	0,533,767,9164,11360,
#Partially deleted in new
chr19	19121083	19138467	chr19:19121083-19138467	0	-	19121083	19134839	789624	10	83,114,144,61,152,157,98,81,133,42,	0,224,441,675,9072,11268,11573,12046,13700,17342,
#Partially deleted in new
chr19	19121341	19130511	chr19:19121341-19130511	0	-	19121341	19121341	8553170	3	327,61,356,	0,417,8814,
#Partially deleted in new
chr19	19121656	19138453	chr19:19121656-19138453	0	-	19133290	19138428	789624	8	12,61,152,157,98,177,104,28,	0,102,8499,10695,11000,11473,13127,16769,
#Partially deleted in new
chr19	19130191	19138501	chr19:19130191-19138501	0	-	19130191	19132419	789624	5	116,157,98,81,76,	0,2160,2465,2938,8234,
#Partially deleted in new
chr19	19130264	19138513	chr19:19130264-19138513	0	-	19130264	19134839	789624	6	43,157,98,81,104,57,	0,2087,2392,2865,4519,8192,
#Partially deleted in new
chr19	19132657	19138447	chr19:19132657-19138447	0	-	19132657	19132657	8553170	3	97,228,22,	0,472,5768,
#Partially deleted in new
chr19	19132879	19138472	chr19:19132879-19138472	0	-	19132879	19132879	8553170	3	331,104,47,	0,1904,5546,
#Partially deleted in new
chr19	19145566	19192131	chr19:19145566-19192131	3	-	19145693	19150735	789624	10	456,94,134,148,135,204,83,76,111,51,	0,988,1175,1469,2131,3659,5115,35119,37006,46514,
#Partially deleted in new
chr19	19145567	19170263	chr19:19145567-19170263	3	-	19146268	19150735	789624	8	817,94,134,148,135,213,83,59,	0,987,1174,1468,2130,3649,5114,24637,
#Partially deleted in new
chr19	19145568	19192158	chr19:19145568-19192158	0	-	19180727	19192117	789624	12	454,94,134,148,135,204,83,76,111,65,113,78,	0,986,1173,1467,2129,3657,5113,35117,37004,40465,41324,46512,
#Partially deleted in new
chr19	19145568	19170248	chr19:19145568-19170248	1	-	19145796	19150735	789624	9	454,133,94,134,148,135,204,83,44,	0,704,986,1173,1467,2129,3657,5113,24636,
#Partially deleted in new
chr19	19145568	19170245	chr19:19145568-19170245	1	-	19145796	19150735	0	9	454,112,94,134,148,135,204,83,41,	0,704,986,1173,1467,2129,3657,5113,24636,
#Partially deleted in new
chr19	19145569	19192128	chr19:19145569-19192128	0	-	19180727	19192117	8553170	12	453,94,134,148,135,204,83,76,111,65,113,48,	0,985,1172,1466,2128,3656,5112,35116,37003,40464,41323,46511,
#Partially deleted in new
chr19	19145571	19192158	chr19:19145571-19192158	0	-	19180727	19192117	789624	13	451,112,94,134,148,135,204,83,76,111,65,113,78,	0,701,983,1170,1464,2126,3654,5110,35114,37001,40462,41321,46509,
#Partially deleted in new
chr19	19145583	19192138	chr19:19145583-19192138	1	-	19145693	19182594	789624	9	439,94,134,148,135,204,83,111,58,	0,971,1158,1452,2114,3642,5098,36989,46497,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	19145592	19170289	chr19:19145592-19170289	1	-	19145796	19150735	789624	8	430,94,148,135,204,83,118,85,	0,962,1443,2105,3633,5089,11432,24612,
#Partially deleted in new
chr19	19146867	19182347	chr19:19146867-19182347	0	-	19146867	19146867	8553170	7	8,148,135,204,83,76,54,	0,168,830,2358,3814,33818,35426,
#Partially deleted in new
chr19	19149292	19192147	chr19:19149292-19192147	0	-	19149292	19149292	8553170	6	137,83,111,65,113,67,	0,1389,33280,36741,37600,42788,
#Partially deleted in new
chr19	19150685	19192122	chr19:19150685-19192122	0	-	19180727	19192117	8553170	7	79,68,76,111,65,113,42,	0,6530,30000,31887,35348,36207,41395,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	19176902	19192412	chr19:19176902-19192412	0	-	19180727	19192117	789624	6	613,1915,111,65,113,332,	0,1944,5670,9131,9990,15178,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	19176903	19180601	chr19:19176903-19180601	0	-	19176903	19176903	8553170	1	3698,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	19176905	19192589	chr19:19176905-19192589	3	-	19180727	19192117	789624	6	555,76,111,65,113,509,	0,3780,5667,9128,9987,15175,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	19176905	19192139	chr19:19176905-19192139	1	-	19177369	19182594	789624	4	555,76,111,59,	0,3780,5667,15175,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	19176931	19186098	chr19:19176931-19186098	0	-	19180727	19186098	789624	4	205,76,111,65,	0,3754,5641,9102,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	19177007	19192588	chr19:19177007-19192588	0	-	19177007	19177007	8553170	6	453,76,111,65,113,59,	0,3678,5565,9026,9885,15522,
#Partially deleted in new
chr19	19181881	19192589	chr19:19181881-19192589	1	-	19182568	19192117	789624	4	802,65,113,509,	0,4152,5011,10199,
#Partially deleted in new
chr19	19182459	19187027	chr19:19182459-19187027	0	-	19182459	19182459	8553170	3	224,65,135,	0,3574,4433,
#Partially deleted in new
chr19	19182622	19192591	chr19:19182622-19192591	0	-	19182622	19182622	8553170	2	61,511,	0,9458,
#Partially deleted in new
chr19	19192228	19197025	chr19:19192228-19197025	0	+	19193946	19197025	789624	4	457,141,195,63,	0,731,1710,4734,
#Partially deleted in new
chr19	19192229	19201869	chr19:19192229-19201869	3	+	19193946	19201719	0	10	325,141,195,84,66,101,126,67,81,221,	0,730,1709,4733,4956,5291,5877,6427,6924,9419,
#Partially deleted in new
chr19	19192242	19201866	chr19:19192242-19201866	1	+	19193946	19201719	0	9	312,141,195,84,101,126,67,81,218,	0,717,1696,4720,5278,5864,6414,6911,9406,
#Partially deleted in new
chr19	19192273	19197621	chr19:19192273-19197621	0	+	19193946	19197621	789624	6	281,141,195,81,66,101,	0,686,1665,4692,4912,5247,
#Partially deleted in new
chr19	19192762	19201802	chr19:19192762-19201802	1	+	19193946	19201719	0	9	338,195,84,66,101,126,67,81,154,	0,1176,4200,4423,4758,5344,5894,6391,8886,
#Partially deleted in new
chr19	19192840	19198722	chr19:19192840-19198722	0	+	19193946	19198722	789624	6	260,195,84,101,126,66,	0,1098,4122,4680,5266,5816,
#Partially deleted in new
chr19	19192845	19197434	chr19:19192845-19197434	0	+	19192845	19192845	8553170	3	255,195,469,	0,1093,4120,
#Partially deleted in new
chr19	19192910	19201866	chr19:19192910-19201866	1	+	19193946	19201719	789624	8	190,195,81,101,126,67,81,218,	0,1028,4055,4610,5196,5746,6243,8738,
#Partially deleted in new
chr19	19192912	19198901	chr19:19192912-19198901	0	+	19192912	19192912	8553170	7	188,195,81,66,101,126,245,	0,1026,4053,4273,4608,5194,5744,
#Partially deleted in new
chr19	19192969	19197663	chr19:19192969-19197663	0	+	19192969	19192969	8553170	4	131,195,84,478,	0,969,3993,4216,
#Partially deleted in new
chr19	19194051	19199195	chr19:19194051-19199195	0	+	19194051	19199195	789624	7	82,84,101,126,67,44,42,	0,2911,3469,4055,4605,4908,5102,
#Partially deleted in new
chr19	19197254	19198161	chr19:19197254-19198161	0	+	19197254	19197254	8553170	2	367,55,	0,852,
#Partially deleted in new
chr19	19198636	19201869	chr19:19198636-19201869	0	+	19198636	19198636	8553170	3	87,81,221,	0,517,3012,
#Partially deleted in new
chr19	19199153	19201863	chr19:19199153-19201863	0	+	19199153	19201719	789624	2	81,207,	0,2503,
#Deleted in new
chr19	19201415	19203424	chr19:19201415-19203424	3	-	19201924	19203060	789624	5	626,68,106,91,402,	0,915,1054,1375,1607,
#Deleted in new
chr19	19201415	19203357	chr19:19201415-19203357	1	-	19201473	19203060	789624	6	148,111,68,106,91,335,	0,515,915,1054,1375,1607,
#Deleted in new
chr19	19201425	19203346	chr19:19201425-19203346	0	-	19201425	19201425	8553170	3	1150,91,324,	0,1365,1597,
#Deleted in new
chr19	19201638	19203359	chr19:19201638-19203359	1	-	19202362	19203060	789624	4	403,68,91,337,	0,692,1152,1384,
#Deleted in new
chr19	19201872	19203411	chr19:19201872-19203411	0	-	19201872	19201872	8553170	4	175,68,106,621,	0,458,597,918,
#Deleted in new
chr19	19202057	19203375	chr19:19202057-19203375	1	-	19202249	19203060	789624	4	341,106,91,353,	0,412,733,965,
#Deleted in new
chr19	19202077	19202844	chr19:19202077-19202844	0	-	19202362	19202844	789624	2	321,54,	0,713,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	19211972	19252233	chr19:19211972-19252233	3	+	19216953	19249911	789624	15	92,80,402,175,128,294,588,1359,117,114,159,83,145,183,2468,	0,4974,6942,12048,12333,13004,14513,15308,21816,23010,26280,28630,33340,36727,37793,
#Partially deleted in new
chr19	19226842	19238792	chr19:19226842-19238792	0	+	19226842	19226842	8553170	5	231,1359,117,114,540,	0,438,6946,8140,11410,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	19232854	19232947	chr19:19232854-19232947	3	+	19232854	19232854	8553170	1	93,	0,
#Partially deleted in new
chr19	19238258	19249929	chr19:19238258-19249929	0	+	19238258	19249911	789624	4	153,83,145,164,	0,2344,7054,11507,
#Partially deleted in new
chr19	19238391	19249019	chr19:19238391-19249019	0	+	19238391	19238391	8553170	4	20,83,145,320,	0,2211,6921,10308,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	19254747	19273369	chr19:19254747-19273369	3	-	19254747	19254747	8553170	12	3461,333,363,118,113,120,93,102,83,270,104,249,	0,3775,6065,6698,7982,11742,12873,13238,14939,15425,16274,18373,
#Deleted in new
chr19	19255637	19256141	chr19:19255637-19256141	3	+	19255637	19255637	8553170	1	504,	0,
#Partially deleted in new
chr19	19255640	19262796	chr19:19255640-19262796	3	-	19257816	19262732	789624	5	2568,333,363,118,67,	0,2882,5172,5805,7089,
#Partially deleted in new
chr19	19258845	19261683	chr19:19258845-19261683	0	-	19258845	19258845	8553170	3	10,363,238,	0,1967,2600,
#Partially deleted in new
chr19	19264363	19266716	chr19:19264363-19266716	0	-	19264363	19264363	8553170	2	510,227,	0,2126,
#Partially deleted in new
chr19	19264363	19273256	chr19:19264363-19273256	0	-	19264363	19264363	8553170	7	510,120,93,102,703,104,136,	0,2126,3257,3622,5323,6658,8757,
#Partially deleted in new
chr19	19264364	19273265	chr19:19264364-19273265	0	-	19264364	19264364	8553170	7	509,120,93,102,756,104,145,	0,2125,3256,3621,5322,6657,8756,
#Partially deleted in new
chr19	19264365	19273288	chr19:19264365-19273288	3	-	19264663	19273215	789624	10	508,120,93,102,125,83,104,98,104,168,	0,2124,3255,3620,4264,5321,5807,5979,6656,8755,
#Partially deleted in new
chr19	19268684	19273391	chr19:19268684-19273391	0	-	19268684	19268684	8553170	4	70,83,104,271,	0,1002,1488,4436,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	19276017	19303828	chr19:19276017-19303828	0	-	19302414	19303828	789624	10	657,130,146,107,178,107,356,179,101,105,	0,929,1716,2672,3195,4167,20971,26247,27330,27706,
#Partially deleted in new
chr19	19276510	19320844	chr19:19276510-19320844	3	-	19276647	19320496	789624	14	164,130,146,107,178,107,356,124,101,124,228,104,172,382,	0,436,1223,2179,2702,3674,20478,25754,26837,27213,29338,33586,39911,43952,
#Partially deleted in new
chr19	19276512	19320509	chr19:19276512-19320509	0	-	19303912	19320496	789624	14	162,130,146,107,178,107,356,124,101,320,228,104,172,47,	0,434,1221,2177,2700,3672,20476,25752,26835,27211,29336,33584,39909,43950,
#Partially deleted in new
chr19	19276512	19302455	chr19:19276512-19302455	0	-	19276512	19276512	8553170	8	162,130,146,107,178,107,356,191,	0,434,1221,2177,2700,3672,20476,25752,
#Partially deleted in new
chr19	19276513	19320509	chr19:19276513-19320509	0	-	19305892	19320496	789624	13	161,130,146,107,178,107,356,124,101,320,228,172,47,	0,433,1220,2176,2699,3671,20475,25751,26834,27210,29335,39908,43949,
#Deleted in new
chr19	19276514	19281492	chr19:19276514-19281492	0	-	19276514	19276514	8553170	6	160,130,146,107,178,1308,	0,432,1219,2175,2698,3670,
#Partially deleted in new
chr19	19297170	19320509	chr19:19297170-19320509	0	-	19297170	19297170	8553170	6	174,101,228,104,172,47,	0,6177,8678,12926,19251,23292,
#Partially deleted in new
chr19	19297181	19303686	chr19:19297181-19303686	0	-	19297181	19297181	8553170	3	163,124,339,	0,5083,6166,
#Partially deleted in new
chr19	19301658	19320509	chr19:19301658-19320509	0	-	19303386	19320496	789624	7	360,124,59,228,104,172,47,	0,606,1689,4190,8438,14763,18804,
#Partially deleted in new
chr19	19302329	19320509	chr19:19302329-19320509	0	-	19302329	19320471	789624	7	59,101,124,228,104,101,47,	0,1018,1394,3519,7767,14092,18133,
#Partially deleted in new
chr19	19303350	19320509	chr19:19303350-19320509	0	-	19310123	19320496	789624	5	98,124,228,104,47,	0,373,2498,6746,17112,
#Partially deleted in new
chr19	19303723	19320497	chr19:19303723-19320497	0	-	19303723	19303723	8553170	5	189,228,104,172,35,	0,2125,6373,12698,16739,
#Partially deleted in new
chr19	19303724	19320498	chr19:19303724-19320498	0	-	19303724	19303724	8553170	4	123,228,172,36,	0,2124,12697,16738,
#Partially deleted in new
chr19	19305645	19320470	chr19:19305645-19320470	0	-	19305645	19305645	8553170	4	431,104,172,8,	0,4451,10776,14817,
#Partially deleted in new
chr19	19306042	19320509	chr19:19306042-19320509	0	-	19316417	19320496	789624	4	34,104,347,47,	0,4054,10204,14420,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr19	19320680	19358755	chr19:19320680-19358755	3	+	19320859	19355782	789624	19	455,18,66,96,95,28,156,147,91,104,78,66,87,50,78,112,91,128,3048,	0,15037,15441,16489,18164,20165,20571,21854,22095,23156,24168,24623,26599,28208,28474,28644,33674,34583,35027,
#Partially deleted in new
chr19	19320985	19342560	chr19:19320985-19342560	0	+	19320985	19342560	789624	6	150,96,95,28,156,26,	0,16184,17859,19860,20266,21549,
#Partially deleted in new
chr19	19321524	19340876	chr19:19321524-19340876	0	+	19321524	19321524	8553170	5	379,18,66,96,31,	0,14193,14597,15645,19321,
#Partially deleted in new
chr19	19334172	19337213	chr19:19334172-19337213	0	+	19334172	19334172	8553170	4	430,18,66,44,	0,1545,1949,2997,
#Partially deleted in new
chr19	19337205	19344865	chr19:19337205-19344865	0	+	19337205	19344865	789624	8	60,95,28,156,147,100,104,17,	0,1639,3640,4046,5329,5570,6631,7643,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	19339666	19344852	chr19:19339666-19344852	0	+	19339666	19339666	8553170	7	38,28,156,147,91,104,4,	0,1179,1585,2868,3109,4170,5182,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	19342534	19344159	chr19:19342534-19344159	0	+	19342534	19342534	8553170	3	147,91,323,	0,241,1302,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	19342617	19358079	chr19:19342617-19358079	0	+	19342617	19342617	8553170	11	64,91,104,521,84,50,78,112,91,128,2372,	0,158,1219,2231,4662,6271,6537,6707,11737,12646,13090,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	19344251	19357755	chr19:19344251-19357755	0	+	19344251	19344251	8553170	9	1118,87,50,78,112,126,91,128,2048,	0,3028,4637,4903,5073,8018,10103,11012,11456,
#Partially deleted in new
chr19	19346876	19355869	chr19:19346876-19355869	0	+	19346876	19346876	8553170	7	490,50,78,112,91,128,162,	0,2012,2278,2448,7478,8387,8831,
#Partially deleted in new
chr19	19347018	19349382	chr19:19347018-19349382	0	+	19347018	19347018	8553170	4	371,50,78,58,	0,1870,2136,2306,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	19347649	19357760	chr19:19347649-19357760	0	+	19347649	19347649	8553170	6	1289,78,112,91,128,2053,	0,1505,1675,6705,7614,8058,
#Partially deleted in new
chr19	19348714	19354610	chr19:19348714-19354610	0	+	19348714	19348714	8553170	4	224,78,112,256,	0,440,610,5640,
#Partially deleted in new
chr19	19348897	19354460	chr19:19348897-19354460	0	+	19348897	19348897	8553170	3	335,112,106,	0,427,5457,
#Deleted in new
chr19	19352397	19357753	chr19:19352397-19357753	0	+	19352397	19352397	8553170	4	1806,91,128,2046,	0,1957,2866,3310,
#Deleted in new
chr19	19355142	19356013	chr19:19355142-19356013	0	+	19355142	19355142	8553170	2	249,306,	0,565,
#Partially deleted in new
chr19	19385825	19465577	chr19:19385825-19465577	0	+	19465345	19465577	789624	3	313,89,238,	0,50305,79514,
#Partially deleted in new
chr19	19385832	19508931	chr19:19385832-19508931	3	+	19465345	19505474	0	12	306,275,133,132,90,132,168,280,296,75,196,3588,	0,79507,106473,106748,108461,109921,110219,112610,115288,116136,116498,119511,
#Partially deleted in new
chr19	19385970	19505707	chr19:19385970-19505707	0	+	19465345	19498461	789624	7	168,270,280,299,75,196,364,	0,79374,112472,115147,115998,116360,119373,
#Partially deleted in new
chr19	19386022	19492711	chr19:19386022-19492711	0	+	19465345	19492711	789624	4	116,275,133,131,	0,79317,106283,106558,
#Partially deleted in new
chr19	19405793	19492675	chr19:19405793-19492675	0	+	19465345	19492675	789624	4	226,275,133,95,	0,59546,86512,86787,
#Partially deleted in new
chr19	19405837	19436219	chr19:19405837-19436219	0	+	19405837	19405837	8553170	2	182,89,	0,30293,
#Partially deleted in new
chr19	19427515	19492596	chr19:19427515-19492596	0	+	19465345	19492596	789624	4	146,275,133,16,	0,37824,64790,65065,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	19427526	19508927	chr19:19427526-19508927	1	+	19465345	19505474	0	14	31,297,89,270,133,132,90,132,168,280,299,75,196,3584,	0,169,8604,37818,64779,65054,66767,68227,68525,70916,73591,74442,74804,77817,
#Deleted in new
chr19	19435062	19435158	chr19:19435062-19435158	3	+	19435062	19435062	5263520	1	96,	0,
#Partially deleted in new
chr19	19457111	19492416	chr19:19457111-19492416	0	+	19465345	19492416	789624	3	118,275,111,	0,8228,35194,
#Partially deleted in new
chr19	19458465	19508927	chr19:19458465-19508927	1	+	19465345	19505474	0	12	149,275,133,132,90,132,168,280,296,75,196,3584,	0,6874,33840,34115,35828,37288,37586,39977,42655,43503,43865,46878,
#Partially deleted in new
chr19	19464681	19492316	chr19:19464681-19492316	0	+	19465345	19492316	789624	3	284,270,11,	0,663,27624,
#Partially deleted in new
chr19	19465339	19507341	chr19:19465339-19507341	0	+	19465345	19492611	789624	8	275,132,132,168,280,299,196,1998,	0,27241,30414,30712,33103,35778,36991,40004,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	19472409	19492429	chr19:19472409-19492429	0	+	19472409	19472409	8553170	2	306,124,	0,19896,
#Partially deleted in new
chr19	19512417	19515548	chr19:19512417-19515548	0	-	19514605	19515427	789624	2	125,1394,	0,1737,
#Partially deleted in new
chr19	19512455	19514935	chr19:19512455-19514935	0	-	19514605	19514935	789624	2	87,791,	0,1689,
#Deleted in new
chr19	19514218	19515685	chr19:19514218-19515685	3	-	19514605	19515427	789624	1	1467,	0,
#Partially deleted in new
chr19	19515735	19528197	chr19:19515735-19528197	0	+	19516238	19526254	789624	5	597,236,72,70,191,	0,10289,11545,11965,12271,
#Partially deleted in new
chr19	19515754	19528198	chr19:19515754-19528198	3	+	19516238	19528126	0	5	578,79,72,70,192,	0,10427,11526,11946,12252,
#Partially deleted in new
chr19	19516226	19536076	chr19:19516226-19536076	3	+	19516238	19535810	789624	7	106,79,72,70,111,114,548,	0,9955,11054,11474,18807,19110,19302,
#Partially deleted in new
chr19	19516227	19529054	chr19:19516227-19529054	1	+	19516238	19528603	789624	5	105,79,72,70,499,	0,9954,11053,11473,12328,
#Partially deleted in new
chr19	19516228	19533476	chr19:19516228-19533476	0	+	19516228	19516228	8553170	8	104,79,72,70,110,154,109,373,	0,9953,11052,11472,11778,13135,16403,16875,
#Partially deleted in new
chr19	19516229	19528022	chr19:19516229-19528022	1	+	19516238	19527908	789624	4	103,79,72,322,	0,9952,11051,11471,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	19516229	19526718	chr19:19516229-19526718	0	+	19516229	19516229	8553170	2	103,537,	0,9952,
#Partially deleted in new
chr19	19516240	19527702	chr19:19516240-19527702	0	+	19516240	19516240	8553170	3	92,79,422,	0,9941,11040,
#Partially deleted in new
chr19	19516260	19528195	chr19:19516260-19528195	0	+	19516260	19527356	789624	5	72,79,92,70,189,	0,9921,11020,11440,11746,
#Partially deleted in new
chr19	19528860	19537580	chr19:19528860-19537580	3	+	19528932	19537524	789624	6	131,109,111,114,151,262,	0,3771,6173,6476,6668,8458,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	19528881	19537578	chr19:19528881-19537578	0	+	19528932	19533232	789624	6	110,109,2041,114,151,260,	0,3750,4222,6455,6647,8437,
#Partially deleted in new
chr19	19528894	19537581	chr19:19528894-19537581	1	+	19528932	19537524	789624	7	97,150,109,111,114,151,263,	0,469,3737,6139,6442,6634,8424,
#Partially deleted in new
chr19	19538247	19546659	chr19:19538247-19546659	1	+	19538349	19546016	789624	8	166,99,291,156,276,109,158,2979,	0,1431,1938,2843,4127,4616,5000,5433,
#Partially deleted in new
chr19	19538264	19546659	chr19:19538264-19546659	3	+	19538349	19546016	789624	8	149,99,273,156,276,109,158,2979,	0,1414,1939,2826,4110,4599,4983,5416,
#Deleted in new
chr19	19540658	19542650	chr19:19540658-19542650	0	+	19540658	19540658	8553170	3	126,156,276,	0,432,1716,
#Partially deleted in new
chr19	19561706	19618693	chr19:19561706-19618693	0	-	19570288	19618629	789624	8	411,107,157,136,201,147,74,183,	0,1802,3226,7742,8392,8980,37585,56804,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	19561706	19563824	chr19:19561706-19563824	0	-	19561706	19561706	8553170	2	411,316,	0,1802,
#Partially deleted in new
chr19	19561712	19618916	chr19:19561712-19618916	3	-	19562024	19618629	789624	8	405,107,157,136,191,248,74,406,	0,1796,3220,7736,8396,8873,37579,56798,
#Partially deleted in new
chr19	19564774	19618681	chr19:19564774-19618681	0	-	19570288	19618629	789624	6	315,136,191,147,74,171,	0,4674,5334,5912,34517,53736,
#Partially deleted in new
chr19	19570225	19579954	chr19:19570225-19579954	0	-	19570225	19570225	8553170	2	646,123,	0,9606,
#Partially deleted in new
chr19	19588090	19588415	chr19:19588090-19588415	7	-	19588090	19588090	16724991	1	325,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	19606349	19608660	chr19:19606349-19608660	3	+	19606349	19606349	8553170	2	416,521,	0,1790,
#Partially deleted in new
chr19	19623667	19628208	chr19:19623667-19628208	1	-	19624255	19627284	0	3	902,804,117,	0,2875,4424,
#Partially deleted in new
chr19	19623668	19628239	chr19:19623668-19628239	1	-	19624255	19627284	0	3	901,742,148,	0,2874,4423,
#Partially deleted in new
chr19	19623668	19628930	chr19:19623668-19628930	3	-	19624255	19627284	0	6	901,742,108,216,76,503,	0,2874,3728,4085,4423,4759,
#Partially deleted in new
chr19	19627043	19628215	chr19:19627043-19628215	0	-	19627043	19627284	789624	2	461,124,	0,1048,
#Partially deleted in new
chr19	19627060	19628761	chr19:19627060-19628761	0	-	19627060	19627284	789624	2	224,334,	0,1367,
#Partially deleted in new
chr19	19627208	19627800	chr19:19627208-19627800	0	-	19627208	19627284	789624	2	76,404,	0,188,
#Partially deleted in new
chr19	19627223	19628529	chr19:19627223-19628529	0	-	19627223	19627284	789624	5	61,108,216,122,102,	0,173,530,868,1204,
#Partially deleted in new
chr19	19627504	19628221	chr19:19627504-19628221	0	-	19627504	19627504	8553170	2	465,130,	0,587,
#Partially deleted in new
chr19	19627847	19628550	chr19:19627847-19628550	0	-	19627847	19627847	8553170	3	122,110,123,	0,244,580,
#Partially deleted in new
chr19	19629475	19643667	chr19:19629475-19643667	3	-	19629962	19643529	0	21	861,67,388,197,138,189,155,78,90,113,197,138,171,81,108,65,126,58,76,85,157,	0,995,4327,5031,5316,5549,5939,6168,7231,7441,7889,8444,8683,8926,10609,10820,10970,12334,12500,13059,14035,
#Partially deleted in new
chr19	19629842	19643561	chr19:19629842-19643561	1	-	19629962	19643529	0	20	494,67,388,197,138,189,155,90,113,197,138,171,81,108,65,126,58,76,85,51,	0,628,3960,4664,4949,5182,5572,6864,7074,7522,8077,8316,8559,10242,10453,10603,11967,12133,12692,13668,
#Deleted in new
chr19	19634110	19635540	chr19:19634110-19635540	0	-	19634110	19634110	8553170	4	80,138,189,126,	0,681,914,1304,
#Partially deleted in new
chr19	19635091	19637485	chr19:19635091-19637485	0	-	19635091	19635091	8553170	5	122,307,90,113,121,	0,323,1615,1825,2273,
#Partially deleted in new
chr19	19635094	19638187	chr19:19635094-19638187	0	-	19635094	19638187	789624	8	119,155,78,81,113,197,138,29,	0,320,549,1612,1822,2270,2825,3064,
#Partially deleted in new
chr19	19638167	19643620	chr19:19638167-19643620	0	-	19642042	19643529	789624	9	162,81,108,65,126,58,76,83,110,	0,234,1917,2128,2278,3642,3808,4369,5343,
#Partially deleted in new
chr19	19638205	19643601	chr19:19638205-19643601	0	-	19642042	19643529	789624	8	124,81,108,126,58,76,83,91,	0,196,1879,2240,3604,3770,4331,5305,
#Partially deleted in new
chr19	19640327	19643598	chr19:19640327-19643598	0	-	19640327	19642041	789624	7	33,126,58,76,85,128,88,	0,118,1482,1648,2207,2772,3183,
#Deleted in new
chr19	19645197	19647711	chr19:19645197-19647711	0	-	19645197	19645197	8553170	2	593,1838,	0,676,
#Partially deleted in new
chr19	19645199	19662116	chr19:19645199-19662116	1	-	19645421	19662116	789624	26	333,144,112,143,197,115,161,97,200,109,126,111,176,158,121,138,127,56,130,107,70,156,73,191,90,42,	0,447,674,1005,1929,2214,2399,4367,4541,6489,7395,8584,8769,9343,9919,10116,10328,10678,10854,11460,11647,11794,12136,14401,14698,16875,
#Partially deleted in new
chr19	19645202	19663693	chr19:19645202-19663693	3	-	19645421	19663666	789624	26	330,144,112,143,197,115,161,97,200,109,126,111,176,158,121,138,127,56,130,107,70,156,73,191,90,423,	0,444,671,1002,1926,2211,2396,4364,4538,6486,7392,8581,8766,9340,9916,10113,10325,10675,10851,11457,11644,11791,12133,14398,14695,18068,
#Partially deleted in new
chr19	19645202	19653396	chr19:19645202-19653396	0	-	19645202	19645202	8553170	9	330,339,143,197,115,161,97,2057,802,	0,444,1002,1926,2211,2396,4364,4538,7392,
#Partially deleted in new
chr19	19645202	19656732	chr19:19645202-19656732	0	-	19645202	19645202	8553170	16	330,339,143,197,346,97,2057,126,111,106,158,121,339,56,130,73,	0,444,1002,1926,2211,4364,4538,7392,8581,8766,9340,9916,10113,10675,10851,11457,
#Partially deleted in new
chr19	19645202	19655451	chr19:19645202-19655451	0	-	19645202	19645202	8553170	15	330,144,112,143,197,115,161,97,200,109,126,111,106,158,333,	0,444,671,1002,1926,2211,2396,4364,4538,6486,7392,8581,8766,9340,9916,
#Deleted in new
chr19	19651139	19653936	chr19:19651139-19653936	0	-	19651139	19651139	8553170	3	658,126,153,	0,1455,2644,
#Deleted in new
chr19	19653717	19654562	chr19:19653717-19654562	0	-	19653717	19653717	8553170	3	177,176,20,	0,251,825,
#Deleted in new
chr19	19653776	19655584	chr19:19653776-19655584	0	-	19653776	19653776	8553170	6	118,106,158,121,138,57,	0,192,766,1342,1539,1751,
#Deleted in new
chr19	19653776	19655451	chr19:19653776-19655451	0	-	19653776	19653776	8553170	4	118,106,158,333,	0,192,766,1342,
#Deleted in new
chr19	19654542	19655685	chr19:19654542-19655685	0	-	19654542	19654542	8553170	4	158,121,138,158,	0,576,773,985,
#Partially deleted in new
chr19	19655543	19659744	chr19:19655543-19659744	0	-	19655543	19655543	8553170	7	111,56,130,257,156,73,144,	0,334,510,1116,1450,1792,4057,
#Partially deleted in new
chr19	19656885	19659745	chr19:19656885-19659745	0	-	19656885	19656885	8553170	3	264,73,145,	0,450,2715,
#Partially deleted in new
chr19	19657101	19663232	chr19:19657101-19663232	0	-	19657101	19663232	789624	5	48,73,191,90,152,	0,234,2499,2796,5979,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	19668795	19680952	chr19:19668795-19680952	0	+	19668963	19680300	789624	5	171,127,61,1374,97,	0,9068,9930,10385,12060,
#Partially deleted in new
chr19	19668795	19679523	chr19:19668795-19679523	0	+	19679349	19679523	789624	3	171,61,343,	0,9930,10385,
#Partially deleted in new
chr19	19668850	19680032	chr19:19668850-19680032	1	+	19668963	19678785	789624	4	116,123,61,852,	0,9013,9875,10330,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	19668853	19683506	chr19:19668853-19683506	3	+	19668963	19680300	789624	4	113,127,61,4326,	0,9010,9872,10327,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	19668900	19680329	chr19:19668900-19680329	1	+	19679349	19680300	789624	5	66,149,127,61,1149,	0,3309,8963,9825,10280,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	19676140	19680032	chr19:19676140-19680032	0	+	19676140	19676140	8553170	3	1846,61,852,	0,2585,3040,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	19681293	19683509	chr19:19681293-19683509	0	+	19681293	19681293	8553170	2	176,427,	0,1789,
#Partially deleted in new
chr19	19699202	19699409	chr19:19699202-19699409	7	-	19699202	19699202	16724991	1	207,	0,
#Partially deleted in new
chr19	19708964	19710465	chr19:19708964-19710465	7	+	19708964	19708964	16724991	2	259,358,	0,1143,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	19710470	19733097	chr19:19710470-19733097	3	-	19711351	19732958	789624	4	2619,61,127,142,	0,3620,3890,22485,
#Partially deleted in new
chr19	19740883	19750127	chr19:19740883-19750127	7	+	19740883	19740883	16724991	13	70,83,40,81,107,111,47,118,94,66,76,156,391,	0,243,1854,2366,2878,3500,4373,5428,6299,6776,7301,7769,8853,
#Partially deleted in new
chr19	19750617	19752544	chr19:19750617-19752544	7	+	19750617	19750617	16724991	1	1927,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	19757365	19776393	chr19:19757365-19776393	3	-	19757365	19757365	789624	3	1181,109,67,	0,5172,18961,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	19757782	19776376	chr19:19757782-19776376	1	-	19757782	19757782	8553170	4	764,96,109,54,	0,3543,4755,18540,
#Partially deleted in new
chr19	19768730	19768989	chr19:19768730-19768989	7	+	19768730	19768730	16724991	1	259,	0,
#Partially deleted in new
chr19	19771571	19776394	chr19:19771571-19776394	1	-	19771571	19771571	8553170	2	234,72,	0,4751,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	19773877	19776423	chr19:19773877-19776423	1	-	19773877	19773877	8553170	1	2546,	0,
#Partially deleted in new
chr19	19776601	19834927	chr19:19776601-19834927	7	+	19776601	19776601	16724991	3	393,127,24,	0,56871,58302,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	19776635	19806376	chr19:19776635-19806376	4	+	19776635	19776635	16724991	5	359,83,123,142,96,	0,9973,12314,13044,29645,
#Partially deleted in new
chr19	19776823	19786884	chr19:19776823-19786884	4	+	19776823	19776823	16724991	2	171,276,	0,9785,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	19785838	19821751	chr19:19785838-19821751	0	-	19794551	19821603	789624	6	1016,923,1827,96,127,151,	0,5723,7995,20192,21103,35762,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	19785841	19821709	chr19:19785841-19821709	3	-	19794551	19821603	789624	6	1013,923,1827,96,127,109,	0,5720,7992,20189,21100,35759,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	19786386	19821740	chr19:19786386-19821740	1	-	19786753	19821603	789624	4	468,96,127,140,	0,19644,20555,35214,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	19786561	19821732	chr19:19786561-19821732	0	-	19791617	19821603	789624	6	293,170,74,96,127,132,	0,5000,5849,19469,20380,35039,
#Partially deleted in new
chr19	19788754	19790531	chr19:19788754-19790531	3	-	19788754	19788754	8553170	2	375,546,	0,1231,
#Partially deleted in new
chr19	19794551	19821749	chr19:19794551-19821749	1	-	19794551	19821603	789624	3	1109,127,149,	0,12390,27049,
#Partially deleted in new
chr19	19794551	19821692	chr19:19794551-19821692	1	-	19794551	19821603	789624	4	1109,96,127,92,	0,11479,12390,27049,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	19794949	19799039	chr19:19794949-19799039	0	-	19794949	19794949	8553170	1	4090,	0,
#Partially deleted in new
chr19	19795212	19821723	chr19:19795212-19821723	0	-	19795212	19795658	789624	2	448,123,	0,26388,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	19798237	19821710	chr19:19798237-19821710	1	-	19798426	19821603	789624	4	242,96,127,110,	0,7793,8704,23363,
#Partially deleted in new
chr19	19798788	19821722	chr19:19798788-19821722	1	-	19799439	19821603	789624	4	662,96,127,122,	0,7242,8153,22812,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	19820254	19821750	chr19:19820254-19821750	0	-	19820254	19820254	8553170	2	412,150,	0,1346,
#Partially deleted in new
chr19	19833472	19836073	chr19:19833472-19836073	5	+	19833472	19833472	16724991	2	127,1198,	0,1403,
#Partially deleted in new
chr19	19856974	19857527	chr19:19856974-19857527	7	+	19856974	19856974	16724991	1	553,	0,
#Partially deleted in new
chr19	19865885	19892083	chr19:19865885-19892083	0	+	19880112	19892083	789624	3	114,96,610,	0,14165,25588,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	19865904	19894674	chr19:19865904-19894674	3	+	19865996	19892747	789624	4	95,127,96,3201,	0,12576,14146,25569,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	19865906	19893648	chr19:19865906-19893648	1	+	19891475	19892747	789624	2	93,2175,	0,25567,
#Partially deleted in new
chr19	19865917	19878695	chr19:19865917-19878695	0	+	19865917	19865917	8553170	2	82,215,	0,12563,
#Deleted in new
chr19	19870722	19871299	chr19:19870722-19871299	7	-	19870722	19870722	16724991	1	577,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	19878480	19893130	chr19:19878480-19893130	1	+	19878480	19892747	789624	4	127,96,444,541,	0,1570,12993,14109,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	19892432	19895847	chr19:19892432-19895847	3	-	19892432	19892432	8553170	2	26,377,	0,3038,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	19900912	19909520	chr19:19900912-19909520	0	+	19900912	19900912	8553170	3	179,93,596,	0,6811,8012,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	19900927	19927313	chr19:19900927-19927313	1	+	19901088	19927244	789624	4	164,127,96,203,	0,14352,15632,26183,
#Partially deleted in new
chr19	19900945	19933509	chr19:19900945-19933509	0	+	19916621	19933509	789624	3	146,96,328,	0,15614,32236,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	19900970	19932997	chr19:19900970-19932997	1	+	19901088	19932153	789624	4	121,127,96,990,	0,14309,15589,31037,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	19900982	19927272	chr19:19900982-19927272	0	+	19900982	19900982	8553170	5	109,89,127,96,162,	0,13751,14297,15577,26128,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	19901060	19935575	chr19:19901060-19935575	3	+	19901088	19934818	789624	4	31,127,96,2394,	0,14219,15499,32121,
#Partially deleted in new
chr19	19908267	19909146	chr19:19908267-19909146	7	-	19908267	19908267	16724991	2	293,262,	0,617,
#Deleted in new
chr19	19933528	19934626	chr19:19933528-19934626	1	+	19933528	19934626	789624	2	496,524,	0,574,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	19978189	19979610	chr19:19978189-19979610	7	-	19978189	19978189	16724991	3	47,246,323,	0,526,1098,
#Partially deleted in new
chr19	19997057	20039465	chr19:19997057-20039465	1	-	19997240	20039345	789624	4	206,96,127,123,	0,25946,27192,42285,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	20004417	20039255	chr19:20004417-20039255	1	-	20006004	20024283	789624	4	2858,96,127,83,	0,18586,19832,34755,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	20004417	20039506	chr19:20004417-20039506	3	-	20006004	20039345	789624	4	2858,96,127,164,	0,18586,19832,34925,
#Partially deleted in new
chr19	20004419	20007262	chr19:20004419-20007262	0	-	20004736	20007262	789624	2	328,122,	0,2721,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	20004419	20008188	chr19:20004419-20008188	0	-	20004419	20004419	8553170	1	3769,	0,
#Partially deleted in new
chr19	20004419	20024299	chr19:20004419-20024299	0	-	20004736	20024299	789624	3	328,96,50,	0,18584,19830,
#Partially deleted in new
chr19	20005666	20039205	chr19:20005666-20039205	1	-	20006004	20024283	789624	6	1609,96,127,175,121,33,	0,17337,18583,25041,25326,33506,
#Partially deleted in new
chr19	20005666	20039443	chr19:20005666-20039443	1	-	20006004	20007273	789624	2	1609,101,	0,33676,
#Partially deleted in new
chr19	20006003	20024419	chr19:20006003-20024419	1	-	20006004	20024397	789624	3	1272,96,170,	0,17000,18246,
#Partially deleted in new
chr19	20006993	20039276	chr19:20006993-20039276	0	-	20006993	20024283	789624	4	282,96,127,104,	0,16010,17256,32179,
#Partially deleted in new
chr19	20007101	20039462	chr19:20007101-20039462	1	-	20007253	20039345	789624	5	174,64,96,127,120,	0,8672,15902,17148,32241,
#Partially deleted in new
chr19	20007155	20039441	chr19:20007155-20039441	0	-	20015837	20039345	789624	6	120,92,69,96,127,99,	0,8019,8618,15848,17094,32187,
#Partially deleted in new
chr19	20030716	20039450	chr19:20030716-20039450	0	-	20030716	20030716	8553170	3	166,121,108,	0,276,8626,
#Partially deleted in new
chr19	20033443	20034332	chr19:20033443-20034332	7	+	20033443	20033443	16724991	2	104,468,	0,421,
#Deleted in new
chr19	20056465	20056594	chr19:20056465-20056594	7	-	20056465	20056465	16724991	1	129,	0,
#Partially deleted in new
chr19	20062754	20063320	chr19:20062754-20063320	7	+	20062754	20062754	16724991	1	566,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	20077993	20127018	chr19:20077993-20127018	0	+	20078132	20121334	789624	6	142,127,96,125,1161,267,	0,26245,27227,43228,47012,48758,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	20077993	20127076	chr19:20077993-20127076	0	+	20077993	20077993	8553170	4	142,96,1161,325,	0,27227,47012,48758,
#Partially deleted in new
chr19	20078004	20118044	chr19:20078004-20118044	0	+	20078132	20106952	789624	5	131,127,96,138,264,	0,26234,27216,28943,39776,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	20078020	20119752	chr19:20078020-20119752	3	+	20078132	20119360	789624	4	115,127,96,1972,	0,26218,27200,39760,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	20078036	20080319	chr19:20078036-20080319	0	+	20078036	20078036	8553170	2	99,533,	0,1750,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	20079817	20080539	chr19:20079817-20080539	7	-	20079817	20079817	16724991	2	131,370,	0,352,
#Partially deleted in new
chr19	20087012	20087576	chr19:20087012-20087576	7	-	20087012	20087012	16724991	1	564,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	20120823	20125143	chr19:20120823-20125143	0	+	20120823	20120823	8553170	2	523,138,	0,4182,
#Partially deleted in new
chr19	20125043	20125484	chr19:20125043-20125484	7	+	20125043	20125043	16724991	1	441,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	20125376	20150548	chr19:20125376-20150548	3	-	20125376	20125376	8553170	3	407,127,188,	0,7084,24984,
#Partially deleted in new
chr19	20125544	20238452	chr19:20125544-20238452	0	-	20125544	20125544	8553170	3	239,127,165,	0,6916,112743,
#Partially deleted in new
chr19	20131893	20151908	chr19:20131893-20151908	7	-	20131893	20131893	16724991	3	54,127,102,	0,567,19913,
#Partially deleted in new
chr19	20136932	20137233	chr19:20136932-20137233	7	+	20136932	20136932	16724991	1	301,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	20167227	20188776	chr19:20167227-20188776	1	+	20167330	20188532	789624	4	133,127,96,378,	0,17128,18759,21171,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	20167273	20200490	chr19:20167273-20200490	3	+	20167330	20198102	789624	4	87,127,96,3527,	0,17082,18713,29690,
#Partially deleted in new
chr19	20175012	20177063	chr19:20175012-20177063	7	-	20175012	20175012	16724991	2	317,217,	0,1834,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	20176099	20238460	chr19:20176099-20238460	1	-	20176099	20176099	8553170	2	710,173,	0,62188,
#Partially deleted in new
chr19	20206843	20206954	chr19:20206843-20206954	7	-	20206843	20206843	16724991	1	111,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	20207191	20209789	chr19:20207191-20209789	3	-	20207191	20207191	8553170	1	2598,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	20216145	20220419	chr19:20216145-20220419	1	-	20216145	20216145	8553170	2	1171,97,	0,4177,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	20220596	20222186	chr19:20220596-20222186	3	-	20220596	20220596	8553170	1	1590,	0,
#Partially deleted in new
chr19	20221868	20222463	chr19:20221868-20222463	7	+	20221868	20221868	16724991	1	595,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	20228009	20238431	chr19:20228009-20238431	0	-	20228009	20228009	8553170	2	474,144,	0,10278,
#Partially deleted in new
chr19	20249051	20250295	chr19:20249051-20250295	7	+	20249051	20249051	16724991	2	133,79,	0,1165,
#Partially deleted in new
chr19	20257719	20259418	chr19:20257719-20259418	7	+	20257719	20257719	16724991	2	123,1062,	0,637,
#Partially deleted in new
chr19	20267816	20268391	chr19:20267816-20268391	7	+	20267816	20267816	16724991	1	575,	0,
#Partially deleted in new
chr19	20295088	20303794	chr19:20295088-20303794	7	+	20295088	20295088	16724991	3	127,96,890,	0,2742,7816,
#Partially deleted in new
chr19	20323991	20324568	chr19:20323991-20324568	7	-	20323991	20323991	16724991	1	577,	0,
#Partially deleted in new
chr19	20330120	20331517	chr19:20330120-20331517	7	+	20330120	20330120	16724991	2	127,51,	0,1346,
#Partially deleted in new
chr19	20340367	20424959	chr19:20340367-20424959	4	-	20340367	20340367	16724991	3	734,96,174,	0,68582,84418,
#Partially deleted in new
chr19	20351501	20352079	chr19:20351501-20352079	7	+	20351501	20351501	16724991	1	578,	0,
#Partially deleted in new
chr19	20389657	20390689	chr19:20389657-20390689	7	+	20389657	20389657	16724991	2	127,85,	0,947,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	20395954	20424956	chr19:20395954-20424956	4	-	20395954	20395954	16724991	3	3084,75,171,	0,12995,28831,
#Partially deleted in new
chr19	20397333	20409959	chr19:20397333-20409959	5	-	20397333	20397333	16724991	3	1705,75,130,	0,11616,12496,
#Partially deleted in new
chr19	20399271	20399354	chr19:20399271-20399354	3	-	20399271	20399271	5263520	1	83,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	20404966	20424969	chr19:20404966-20424969	5	-	20404966	20404966	16724991	3	1166,96,184,	0,3983,19819,
#Partially deleted in new
chr19	20416513	20417069	chr19:20416513-20417069	7	+	20416513	20416513	16724991	1	556,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	20432551	20528615	chr19:20432551-20528615	3	+	20432551	20432551	8553170	4	160,96,133,422,	0,19641,64530,95642,
#Partially deleted in new
chr19	20443214	20443725	chr19:20443214-20443725	7	-	20443214	20443214	16724991	1	511,	0,
#Partially deleted in new
chr19	20535824	20544709	chr19:20535824-20544709	0	-	20536081	20544709	789624	2	326,91,	0,8794,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	20543430	20565735	chr19:20543430-20565735	3	-	20544591	20565640	789624	4	2546,96,127,98,	0,9044,10278,22207,
#Partially deleted in new
chr19	20545309	20565746	chr19:20545309-20565746	0	-	20545309	20552508	789624	3	667,96,109,	0,7165,20328,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	20551084	20565809	chr19:20551084-20565809	1	-	20551088	20565640	789624	4	174,96,127,172,	0,1390,2624,14553,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	20553791	20661583	chr19:20553791-20661583	3	-	20553791	20553791	8553170	5	44,115,96,127,140,	0,26415,91892,92487,107652,
#Deleted in new
chr19	20583083	20583647	chr19:20583083-20583647	7	-	20583083	20583083	16724991	1	564,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	20620060	20661593	chr19:20620060-20661593	1	-	20624289	20661446	789624	4	5590,96,127,150,	0,25623,26218,41383,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	20621366	20661507	chr19:20621366-20661507	3	-	20624086	20661446	789624	5	2998,1119,96,127,64,	0,3165,24317,24912,40077,
#Partially deleted in new
chr19	20625243	20661537	chr19:20625243-20661537	0	-	20625243	20625648	789624	2	407,94,	0,36200,
#Partially deleted in new
chr19	20644701	20661596	chr19:20644701-20661596	1	-	20645395	20661446	789624	4	747,96,127,153,	0,982,1577,16742,
#Partially deleted in new
chr19	20674922	20696533	chr19:20674922-20696533	7	+	20674922	20674922	16724991	4	121,96,657,1300,	0,3702,16417,20311,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	20691335	20697615	chr19:20691335-20697615	7	+	20691335	20691335	16724991	2	661,2076,	0,4204,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	20746922	20755250	chr19:20746922-20755250	3	-	20746922	20746922	8553170	1	8328,	0,
#Deleted in new
chr19	20758439	20758952	chr19:20758439-20758952	7	+	20758439	20758439	16724991	1	513,	0,
#Partially deleted in new
chr19	20776303	20794597	chr19:20776303-20794597	1	+	20792574	20793892	789624	3	178,127,815,	0,16208,17479,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	20776309	20799393	chr19:20776309-20799393	1	+	20776447	20799392	789624	4	141,127,96,393,	0,16202,17473,22691,
#Partially deleted in new
chr19	20776424	20807322	chr19:20776424-20807322	3	+	20776447	20807322	789624	4	26,127,96,1496,	0,16087,17358,29402,
#Partially deleted in new
chr19	20784595	20785152	chr19:20784595-20785152	7	-	20784595	20784595	16724991	1	557,	0,
#Partially deleted in new
chr19	20838514	20847417	chr19:20838514-20847417	7	-	20838514	20838514	16724991	3	53,127,137,	0,889,8766,
#Partially deleted in new
chr19	20923221	20948915	chr19:20923221-20948915	1	+	20923400	20935024	789624	4	182,127,82,172,	0,10802,11744,25522,
#Partially deleted in new
chr19	20923252	20948893	chr19:20923252-20948893	0	+	20923400	20948893	789624	4	151,127,78,150,	0,10771,11717,25491,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	20923275	20943977	chr19:20923275-20943977	1	+	20923400	20942835	789624	4	128,127,99,1177,	0,10748,11673,19525,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	20923284	20945709	chr19:20923284-20945709	0	+	20923400	20945709	789624	4	119,127,99,211,	0,10739,11664,22214,
#Partially deleted in new
chr19	20923284	20948791	chr19:20923284-20948791	0	+	20923400	20948791	789624	5	119,127,99,90,48,	0,10739,11664,23015,25459,
#Partially deleted in new
chr19	20923287	20950697	chr19:20923287-20950697	3	+	20923400	20950302	789624	4	116,127,99,1954,	0,10736,11661,25456,
#Partially deleted in new
chr19	20923303	20949093	chr19:20923303-20949093	0	+	20935010	20949093	789624	3	100,99,350,	0,11645,25440,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	20923309	20943726	chr19:20923309-20943726	1	+	20934116	20942835	789624	4	107,127,99,926,	0,10714,11639,19491,
#Partially deleted in new
chr19	20923400	20950302	chr19:20923400-20950302	1	+	20923400	20950302	789624	3	3,127,1559,	0,10623,25343,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	20926776	20928714	chr19:20926776-20928714	3	-	20926776	20926776	8553170	1	1938,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	20936663	20950697	chr19:20936663-20950697	0	+	20936663	20936663	8553170	2	698,1954,	0,12080,
#Partially deleted in new
chr19	20961056	20965140	chr19:20961056-20965140	7	+	20961056	20961056	16724991	3	496,769,306,	0,1492,3778,
#Partially deleted in new
chr19	20972261	20983210	chr19:20972261-20983210	3	+	20972261	20972261	8553170	2	256,319,	0,10630,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	21020619	21060050	chr19:21020619-21060050	3	+	21020800	21058021	789624	5	184,93,127,99,3420,	0,2169,12836,13466,36011,
#Partially deleted in new
chr19	21020649	21049567	chr19:21020649-21049567	0	+	21020800	21049567	789624	5	154,93,127,99,63,	0,2139,12806,13436,28855,
#Partially deleted in new
chr19	21020656	21033717	chr19:21020656-21033717	0	+	21020656	21020656	8553170	3	147,93,262,	0,2132,12799,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	21020716	21036802	chr19:21020716-21036802	1	+	21020800	21034192	789624	4	87,93,127,2714,	0,2072,12739,13372,
#Deleted in new
chr19	21025914	21026041	chr19:21025914-21026041	7	-	21025914	21025914	16724991	1	127,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	21057804	21058446	chr19:21057804-21058446	0	+	21057804	21058190	789624	2	100,376,	0,266,
#Partially deleted in new
chr19	21063923	21064261	chr19:21063923-21064261	7	+	21063923	21063923	16724991	1	338,	0,
#Partially deleted in new
chr19	21082158	21117215	chr19:21082158-21117215	0	+	21117129	21117215	789624	2	190,387,	0,34670,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	21082173	21125270	chr19:21082173-21125270	1	+	21098268	21125154	789624	5	175,92,127,96,310,	0,1804,16011,16641,42787,
#Partially deleted in new
chr19	21082198	21117200	chr19:21082198-21117200	0	+	21098237	21117200	789624	3	150,127,372,	0,15986,34630,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	21082199	21123151	chr19:21082199-21123151	3	+	21098268	21118332	789624	5	149,92,127,99,6345,	0,1778,15985,16612,34607,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	21082202	21118885	chr19:21082202-21118885	1	+	21098268	21116900	789624	6	146,92,127,96,22,2079,	0,1775,15982,16612,27420,34604,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	21082202	21125094	chr19:21082202-21125094	0	+	21098268	21116900	789624	7	146,92,127,96,22,2079,134,	0,1775,15982,16612,27420,34604,42758,
#Partially deleted in new
chr19	21082202	21117084	chr19:21082202-21117084	0	+	21098268	21117084	789624	4	146,127,96,278,	0,15982,16612,34604,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	21082208	21125094	chr19:21082208-21125094	0	+	21098268	21118332	789624	6	140,92,127,99,2079,134,	0,1769,15976,16603,34598,42752,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	21082249	21118477	chr19:21082249-21118477	1	+	21098268	21116854	789624	5	99,92,127,99,1649,	0,1728,15935,16562,34579,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	21084019	21091758	chr19:21084019-21091758	0	+	21084019	21084019	8553170	2	50,848,	0,6891,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	21113127	21113236	chr19:21113127-21113236	7	-	21113127	21113127	16724991	1	109,	0,
#Deleted in new
chr19	21123816	21124188	chr19:21123816-21124188	7	+	21123816	21123816	16724991	1	372,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	21142023	21184092	chr19:21142023-21184092	1	+	21142183	21182716	789624	6	163,93,127,96,22,1470,	0,1527,24311,25547,33429,40599,
#Partially deleted in new
chr19	21142034	21182660	chr19:21142034-21182660	1	+	21142183	21169852	789624	6	152,93,127,96,80,38,	0,1516,24300,25536,27768,40588,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	21142036	21190231	chr19:21142036-21190231	1	+	21142183	21189891	789624	3	150,93,367,	0,1514,47828,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	21142039	21196053	chr19:21142039-21196053	3	+	21142183	21184034	789624	5	147,93,127,96,13431,	0,1511,24295,25531,40583,
#Deleted in new
chr19	21149647	21150438	chr19:21149647-21150438	7	-	21149647	21149647	16724991	1	791,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	21184491	21190226	chr19:21184491-21190226	0	+	21184491	21184491	8553170	2	106,362,	0,5373,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	21185943	21189998	chr19:21185943-21189998	0	+	21185943	21185943	8553170	2	344,134,	0,3921,
#Partially deleted in new
chr19	21188597	21188953	chr19:21188597-21188953	7	+	21188597	21188597	16724991	1	356,	0,
#Partially deleted in new
chr19	21221644	21222746	chr19:21221644-21222746	7	-	21221644	21221644	16724991	1	1102,	0,
#Partially deleted in new
chr19	21225097	21245241	chr19:21225097-21245241	7	-	21225097	21225097	16724991	3	88,95,130,	0,19415,20014,
#Partially deleted in new
chr19	21233334	21233652	chr19:21233334-21233652	7	+	21233334	21233334	16724991	1	318,	0,
#Partially deleted in new
chr19	21276022	21276332	chr19:21276022-21276332	7	-	21276022	21276022	16724991	1	310,	0,
#Partially deleted in new
chr19	21289553	21289998	chr19:21289553-21289998	7	-	21289553	21289553	16724991	1	445,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	21291159	21329410	chr19:21291159-21329410	3	-	21293273	21329212	789624	4	3580,96,127,201,	0,18086,19341,38050,
#Partially deleted in new
chr19	21292603	21329425	chr19:21292603-21329425	0	-	21328027	21329212	789624	4	2136,96,182,216,	0,16642,35356,36606,
#Partially deleted in new
chr19	21294395	21329336	chr19:21294395-21329336	0	-	21294395	21309279	789624	3	344,96,127,	0,14850,34814,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	21294542	21329382	chr19:21294542-21329382	0	-	21294542	21294737	789624	4	197,124,96,173,	0,12275,14703,34667,
#Partially deleted in new
chr19	21318160	21318719	chr19:21318160-21318719	7	+	21318160	21318160	16724991	1	559,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	21358929	21379300	chr19:21358929-21379300	3	+	21359140	21377483	789624	5	214,93,127,96,1912,	0,2836,16308,16939,18459,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	21358991	21379302	chr19:21358991-21379302	1	+	21359140	21378663	789624	5	152,93,127,96,674,	0,2774,16246,16877,19637,
#Partially deleted in new
chr19	21359010	21378310	chr19:21359010-21378310	1	+	21359140	21378083	789624	5	133,93,127,96,298,	0,2755,16227,16858,19002,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	21359029	21372842	chr19:21359029-21372842	1	+	21359140	21372074	789624	3	114,93,879,	0,2736,12934,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	21381219	21381921	chr19:21381219-21381921	7	-	21381219	21381219	16724991	2	264,130,	0,572,
#Partially deleted in new
chr19	21382864	21387177	chr19:21382864-21387177	7	+	21382864	21382864	16724991	3	1240,356,168,	0,3481,4145,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	21397128	21427573	chr19:21397128-21427573	3	+	21397237	21424984	789624	4	139,127,96,4661,	0,8000,8632,25784,
#Partially deleted in new
chr19	21397132	21427163	chr19:21397132-21427163	1	+	21423043	21424984	789624	2	135,4251,	0,25780,
#Partially deleted in new
chr19	21397132	21405836	chr19:21397132-21405836	0	+	21397237	21397384	789624	3	290,127,79,	0,7996,8625,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	21397155	21408799	chr19:21397155-21408799	1	+	21397237	21407528	789624	4	112,127,99,1327,	0,7973,8602,10317,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	21397165	21398934	chr19:21397165-21398934	1	+	21397237	21397384	789624	1	1769,	0,
#Partially deleted in new
chr19	21405158	21491266	chr19:21405158-21491266	3	+	21405158	21489747	789624	5	97,99,106,112,58,	0,599,84506,85244,86050,
#Partially deleted in new
chr19	21405277	21422949	chr19:21405277-21422949	0	+	21405277	21405277	8553170	2	579,37,	0,17635,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	21411939	21414599	chr19:21411939-21414599	0	+	21411939	21411939	8553170	1	2660,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	21444240	21463908	chr19:21444240-21463908	3	-	21444240	21444240	8553170	4	183,90,128,165,	0,10142,12220,19503,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	21452039	21463884	chr19:21452039-21463884	0	-	21452039	21452039	8553170	2	4549,141,	0,11704,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	21453195	21463872	chr19:21453195-21463872	1	-	21453195	21453195	8553170	4	582,90,128,129,	0,1187,3265,10548,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	21455330	21463897	chr19:21455330-21463897	1	-	21455330	21455330	8553170	3	274,128,154,	0,1130,8413,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	21483373	21499298	chr19:21483373-21499298	1	+	21483373	21483373	8553170	14	158,90,49,146,106,112,77,114,98,582,212,114,71,1100,	0,2203,2731,4937,6291,7029,7427,7615,7840,9892,10746,11720,13278,14825,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	21483714	21503238	chr19:21483714-21503238	3	+	21483714	21483714	789624	11	292,49,106,112,103,582,212,114,71,151,1968,	0,2390,5950,6688,7494,9551,10405,11379,12937,14484,17556,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	21494284	21499893	chr19:21494284-21499893	1	+	21494284	21494284	8553170	2	47,1695,	0,3914,
#Partially deleted in new
chr19	21496681	21536499	chr19:21496681-21536499	0	+	21496681	21496681	8553170	6	41,151,196,127,96,220,	0,1517,32402,32976,33907,39598,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	21505563	21538078	chr19:21505563-21538078	3	+	21505771	21538078	789624	4	211,127,96,1799,	0,24094,25025,30716,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	21505603	21518988	chr19:21505603-21518988	0	+	21505603	21505603	8553170	3	171,96,414,	0,381,12971,
#Partially deleted in new
chr19	21505612	21529147	chr19:21505612-21529147	0	+	21505612	21505612	8553170	2	468,64,	0,23471,
#Partially deleted in new
chr19	21505640	21507664	chr19:21505640-21507664	0	+	21505640	21505640	8553170	3	134,96,145,	0,344,1879,
#Partially deleted in new
chr19	21505660	21538660	chr19:21505660-21538660	1	+	21505771	21538640	789624	11	114,127,96,517,145,21,39,27,768,12,23,	0,23997,24928,30619,31220,31366,31392,31432,31461,32962,32977,
#Partially deleted in new
chr19	21505698	21507675	chr19:21505698-21507675	0	+	21505698	21505698	8553170	2	382,156,	0,1821,
#Partially deleted in new
chr19	21521342	21521896	chr19:21521342-21521896	7	-	21521342	21521342	16724991	1	554,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	21554639	21569237	chr19:21554639-21569237	3	-	21554639	21554639	8553170	2	313,134,	0,14464,
#Partially deleted in new
chr19	21570821	21587322	chr19:21570821-21587322	3	-	21570821	21570821	8553170	2	718,460,	0,16041,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	21587431	21594006	chr19:21587431-21594006	3	-	21587431	21587431	8553170	2	180,2229,	0,4346,
#Partially deleted in new
chr19	21592726	21593041	chr19:21592726-21593041	7	+	21592726	21592726	16724991	1	315,	0,
#Partially deleted in new
chr19	21593684	21594628	chr19:21593684-21594628	0	-	21593684	21593684	8553170	2	234,203,	0,741,
#Partially deleted in new
chr19	21634832	21635175	chr19:21634832-21635175	7	-	21634832	21634832	16724991	1	343,	0,
#Partially deleted in new
chr19	21637973	21656300	chr19:21637973-21656300	7	+	21637973	21637973	16724991	3	124,96,1147,	0,939,17180,
#Deleted in new
chr19	21677549	21678221	chr19:21677549-21678221	7	-	21677549	21677549	16724991	1	672,	0,
#Deleted in new
chr19	21709521	21710191	chr19:21709521-21710191	7	+	21709521	21709521	16724991	1	670,	0,
#Deleted in new
chr19	21719800	21720035	chr19:21719800-21720035	7	-	21719800	21719800	16724991	1	235,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	21722765	21767628	chr19:21722765-21767628	3	-	21726682	21767429	789624	5	5224,99,127,93,202,	0,21251,22175,42928,44661,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	21726192	21750783	chr19:21726192-21750783	1	-	21726682	21744974	789624	4	1797,96,127,263,	0,17824,18748,24328,
#Partially deleted in new
chr19	21726528	21767498	chr19:21726528-21767498	1	-	21726598	21767429	789624	8	76,27,84,1265,96,127,90,75,	0,79,108,196,17488,18412,39165,40895,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	21727930	21750712	chr19:21727930-21750712	0	-	21727930	21744974	789624	5	59,96,127,74,192,	0,16086,17010,18885,22590,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	21750746	21753438	chr19:21750746-21753438	7	+	21750746	21750746	16724991	1	2692,	0,
#Partially deleted in new
chr19	21750846	21751919	chr19:21750846-21751919	5	+	21750846	21750846	16724991	1	1073,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	21753192	21765776	chr19:21753192-21765776	0	-	21753192	21753192	8553170	2	381,83,	0,12501,
#Partially deleted in new
chr19	21768771	21793631	chr19:21768771-21793631	3	-	21768771	21768771	8553170	2	356,115,	0,24745,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	21800479	21801266	chr19:21800479-21801266	7	+	21800479	21800479	16724991	1	787,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	21804948	21852068	chr19:21804948-21852068	1	-	21807606	21851934	789624	4	4859,99,127,164,	0,12939,14146,46956,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	21804949	21852017	chr19:21804949-21852017	1	-	21807606	21819206	789624	7	4858,99,127,182,115,90,113,	0,12938,14145,38195,40442,45988,46955,
#Partially deleted in new
chr19	21807280	21852028	chr19:21807280-21852028	1	-	21807606	21819206	789624	7	2527,99,127,182,115,225,124,	0,10607,11814,35864,38111,43657,44624,
#Partially deleted in new
chr19	21807325	21836208	chr19:21807325-21836208	3	-	21807606	21836038	789624	4	2482,99,127,173,	0,10562,11769,28710,
#Partially deleted in new
chr19	21807352	21851968	chr19:21807352-21851968	1	-	21807606	21819206	789624	6	2455,99,127,182,77,64,	0,10535,11742,35792,38077,44552,
#Partially deleted in new
chr19	21809478	21836187	chr19:21809478-21836187	0	-	21809478	21817921	789624	3	329,99,152,	0,8409,26557,
#Partially deleted in new
chr19	21809680	21852125	chr19:21809680-21852125	0	-	21809680	21817921	789624	3	127,99,221,	0,8207,42224,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	21812012	21838947	chr19:21812012-21838947	1	-	21812012	21819206	789624	5	44,99,127,181,109,	0,5875,7082,25841,26826,
#Partially deleted in new
chr19	21817917	21840086	chr19:21817917-21840086	0	-	21817917	21819206	789624	3	69,127,278,	0,1177,21891,
#Partially deleted in new
chr19	21826512	21827279	chr19:21826512-21827279	7	+	21826512	21826512	16724991	2	41,371,	0,396,
#Deleted in new
chr19	21839596	21841647	chr19:21839596-21841647	0	-	21839596	21839596	8553170	1	2051,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	21843187	21852029	chr19:21843187-21852029	0	-	21843187	21843187	8553170	4	139,115,198,125,	0,2204,7975,8717,
#Partially deleted in new
chr19	21843319	21852030	chr19:21843319-21852030	0	-	21843319	21843319	8553170	5	7,115,65,225,126,	0,2072,6594,7618,8585,
#Partially deleted in new
chr19	21932957	22010949	chr19:21932957-22010949	1	-	21933158	22010794	789624	5	280,79,96,127,158,	0,41771,54258,55825,77834,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	21939772	22010943	chr19:21939772-22010943	3	-	21941311	22010794	789624	4	1652,96,127,152,	0,47443,49010,71019,
#Deleted in new
chr19	21940819	21941533	chr19:21940819-21941533	7	+	21940819	21940819	16724991	1	714,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	21965707	21968529	chr19:21965707-21968529	3	-	21965707	21965707	8553170	1	2822,	0,
#Partially deleted in new
chr19	21970682	22010943	chr19:21970682-22010943	1	-	21970682	22010794	789624	7	56,884,1177,1161,96,127,152,	0,519,1487,2964,16533,18100,40109,
#Partially deleted in new
chr19	21971190	22010943	chr19:21971190-22010943	1	-	21971190	22010794	789624	4	3617,96,127,152,	0,16025,17592,39601,
#Partially deleted in new
chr19	21986727	21988908	chr19:21986727-21988908	0	-	21987207	21988908	789624	2	584,126,	0,2055,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	21988824	22010943	chr19:21988824-22010943	0	-	21988824	21991468	789624	3	85,299,152,	0,2614,21967,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	21997647	21998840	chr19:21997647-21998840	7	+	21997647	21997647	16724991	1	1193,	0,
#Partially deleted in new
chr19	22043499	22050005	chr19:22043499-22050005	3	-	22043499	22043499	8553170	4	26,107,222,191,	0,2379,2591,6315,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	22052483	22074553	chr19:22052483-22074553	0	+	22052632	22074553	789624	4	152,127,96,182,	0,20325,20985,21888,
#Partially deleted in new
chr19	22052483	22088376	chr19:22052483-22088376	0	+	22087978	22088376	789624	2	152,400,	0,35493,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	22052488	22091480	chr19:22052488-22091480	3	+	22052632	22089442	789624	4	147,127,96,3504,	0,20320,20980,35488,
#Partially deleted in new
chr19	22052535	22088405	chr19:22052535-22088405	1	+	22052632	22087553	789624	5	100,127,96,65,429,	0,20273,20933,34995,35441,
#Partially deleted in new
chr19	22065827	22066398	chr19:22065827-22066398	7	-	22065827	22065827	16724991	1	571,	0,
#Partially deleted in new
chr19	22128626	22130318	chr19:22128626-22130318	7	-	22128626	22128626	16724991	3	341,171,547,	0,650,1145,
#Deleted in new
chr19	22130324	22130489	chr19:22130324-22130489	7	+	22130324	22130324	16724991	1	165,	0,
#Deleted in new
chr19	22137930	22138981	chr19:22137930-22138981	7	+	22137930	22137930	16724991	1	1051,	0,
#Deleted in new
chr19	22140531	22141117	chr19:22140531-22141117	7	+	22140531	22140531	16724991	1	586,	0,
#Deleted in new
chr19	22174765	22175191	chr19:22174765-22175191	7	-	22174765	22174765	16724991	1	426,	0,
#Partially deleted in new
chr19	22179090	22196951	chr19:22179090-22196951	1	-	22179949	22196633	789624	3	2496,96,352,	0,13925,17509,
#Partially deleted in new
chr19	22179949	22215775	chr19:22179949-22215775	3	-	22179949	22215634	8553170	4	1637,96,127,144,	0,13066,16650,35682,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	22203127	22204003	chr19:22203127-22204003	7	+	22203127	22203127	16724991	2	455,119,	0,757,
#Partially deleted in new
chr19	22215633	22215661	chr19:22215633-22215661	7	-	22215633	22215633	16724991	1	28,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	22243253	22245347	chr19:22243253-22245347	3	-	22243253	22243253	8553170	1	2094,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	22259692	22261335	chr19:22259692-22261335	3	+	22259692	22259692	8553170	2	99,287,	0,1356,
#Partially deleted in new
chr19	22286407	22317176	chr19:22286407-22317176	3	+	22286525	22317176	789624	4	148,127,96,3506,	0,17350,18280,27263,
#Partially deleted in new
chr19	22298976	22299868	chr19:22298976-22299868	7	-	22298976	22298976	16724991	2	231,335,	0,557,
#Deleted in new
chr19	22362588	22362825	chr19:22362588-22362825	7	+	22362588	22362588	16724991	1	237,	0,
#Deleted in new
chr19	22368598	22368952	chr19:22368598-22368952	7	-	22368598	22368598	16724991	1	354,	0,
#Partially deleted in new
chr19	22391018	22422346	chr19:22391018-22422346	3	-	22391515	22422224	789624	4	1963,96,127,152,	0,11770,12367,31176,
#Partially deleted in new
chr19	22392720	22422357	chr19:22392720-22422357	0	-	22392720	22403419	789624	4	261,96,127,111,	0,10068,10665,29526,
#Partially deleted in new
chr19	22402381	22422354	chr19:22402381-22422354	1	-	22402553	22422224	789624	4	183,96,127,160,	0,407,1004,19813,
#Partially deleted in new
chr19	22403433	22532485	chr19:22403433-22532485	0	-	22403433	22532386	789624	3	79,267,147,	0,110930,128905,
#Partially deleted in new
chr19	22422512	22426045	chr19:22422512-22426045	3	+	22422512	22422512	8553170	2	39,141,	0,3392,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	22435661	22532485	chr19:22435661-22532485	0	-	22435661	22435661	8553170	2	345,147,	0,96677,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	22447933	22448777	chr19:22447933-22448777	7	-	22447933	22447933	16724991	2	122,432,	0,412,
#Partially deleted in new
chr19	22455987	22456459	chr19:22455987-22456459	3	+	22455987	22455987	8553170	1	472,	0,
#Partially deleted in new
chr19	22457328	22458212	chr19:22457328-22458212	7	-	22457328	22457328	16724991	2	162,407,	0,477,
#Partially deleted in new
chr19	22463921	22473036	chr19:22463921-22473036	7	+	22463921	22463921	16724991	3	128,96,2080,	0,625,7035,
#Deleted in new
chr19	22501698	22501948	chr19:22501698-22501948	7	-	22501698	22501698	16724991	1	250,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	22520994	22527949	chr19:22520994-22527949	3	-	22520994	22520994	789624	5	272,243,81,117,2642,	0,956,2558,3626,4313,
#Deleted in new
chr19	22532625	22533494	chr19:22532625-22533494	3	+	22532625	22532625	789624	2	289,279,	0,590,
#Deleted in new
chr19	22532670	22533412	chr19:22532670-22533412	1	+	22532670	22532670	8553170	3	72,108,314,	0,136,428,
#Deleted in new
chr19	22532776	22533491	chr19:22532776-22533491	0	+	22532776	22532776	8553170	2	138,321,	0,394,
#Deleted in new
chr19	22595478	22596163	chr19:22595478-22596163	7	-	22595478	22595478	16724991	3	114,116,90,	0,305,595,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	22596256	22603550	chr19:22596256-22603550	7	+	22596256	22596256	16724991	10	163,117,108,88,119,679,219,103,105,332,	0,1027,3172,3449,3911,5103,6040,6346,6531,6962,
#Partially deleted in new
chr19	22596275	22601451	chr19:22596275-22601451	4	+	22596275	22596275	16724991	5	144,117,108,119,92,	0,1008,3153,3892,5084,
#Partially deleted in new
chr19	22596336	22603430	chr19:22596336-22603430	5	+	22596336	22596336	16724991	14	83,117,89,108,88,245,225,116,75,219,125,82,153,212,	0,947,2896,3092,3369,3831,4716,5023,5627,5960,6266,6474,6641,6882,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	22601484	22601707	chr19:22601484-22601707	3	+	22601484	22601484	8553170	1	223,	0,
#Deleted in new
chr19	22603268	22608501	chr19:22603268-22608501	3	+	22603268	22603268	8553170	4	144,190,41,54,	0,2576,4654,5179,
#Deleted in new
chr19	22605738	22608211	chr19:22605738-22608211	7	+	22605738	22605738	16724991	2	208,320,	0,2153,
#Deleted in new
chr19	22607174	22608002	chr19:22607174-22608002	4	+	22607174	22607174	16724991	2	79,80,	0,748,
#Deleted in new
chr19	22609605	22610601	chr19:22609605-22610601	7	+	22609605	22609605	16724991	1	996,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	22615556	22623971	chr19:22615556-22623971	3	-	22615556	22615556	789624	2	997,115,	0,8300,
#Deleted in new
chr19	22620482	22620724	chr19:22620482-22620724	7	+	22620482	22620482	16724991	1	242,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	22634323	22667670	chr19:22634323-22667670	3	+	22653399	22665265	789624	4	151,127,96,3871,	0,18983,19596,29476,
#Partially deleted in new
chr19	22665551	22716991	chr19:22665551-22716991	3	-	22665551	22665551	8553170	4	173,105,111,229,	0,5802,48900,51211,
#Deleted in new
chr19	22685166	22686732	chr19:22685166-22686732	7	+	22685166	22685166	16724991	1	1566,	0,
#Partially deleted in new
chr19	22698119	22716818	chr19:22698119-22716818	1	-	22698119	22698119	8553170	3	252,111,56,	0,16332,18643,
#Deleted in new
chr19	22699351	22699685	chr19:22699351-22699685	7	+	22699351	22699351	16724991	1	334,	0,
#Deleted in new
chr19	22708833	22709314	chr19:22708833-22709314	7	-	22708833	22708833	16724991	1	481,	0,
#Deleted in new
chr19	22742923	22743410	chr19:22742923-22743410	7	-	22742923	22742923	16724991	1	487,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	22752182	22784107	chr19:22752182-22784107	1	-	22757313	22784016	789624	4	7500,96,127,94,	0,16122,17015,31831,
#Partially deleted in new
chr19	22756204	22769982	chr19:22756204-22769982	3	-	22756204	22769982	789624	8	182,342,396,1639,266,96,127,66,	0,232,734,1237,3212,12100,12993,13712,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	22770374	22770622	chr19:22770374-22770622	7	+	22770374	22770374	16724991	1	248,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	22770936	22771191	chr19:22770936-22771191	7	+	22770936	22770936	16724991	1	255,	0,
#Deleted in new
chr19	22773852	22774424	chr19:22773852-22774424	7	+	22773852	22773852	16724991	1	572,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	22832320	22858667	chr19:22832320-22858667	3	+	22832379	22858433	789624	4	62,127,96,1550,	0,15940,16877,24797,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	22840431	22840921	chr19:22840431-22840921	7	-	22840431	22840431	16724991	1	490,	0,
#Deleted in new
chr19	22861302	22861594	chr19:22861302-22861594	7	+	22861302	22861302	16724991	1	292,	0,
#Partially deleted in new
chr19	22907085	22914289	chr19:22907085-22914289	3	-	22907085	22907085	8553170	3	154,64,165,	0,3808,7039,
#Deleted in new
chr19	22925376	22925547	chr19:22925376-22925547	7	+	22925376	22925376	16724991	1	171,	0,
#Partially deleted in new
chr19	22975467	23003176	chr19:22975467-23003176	3	-	22975467	23003030	789624	4	1643,96,127,149,	0,11840,12857,27560,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	22976633	22987367	chr19:22976633-22987367	0	-	22985661	22987367	789624	3	477,177,60,	0,9021,10674,
#Partially deleted in new
chr19	22994967	22995847	chr19:22994967-22995847	7	+	22994967	22994967	16724991	2	465,109,	0,771,
#Partially deleted in new
chr19	23015074	23023697	chr19:23015074-23023697	3	-	23015074	23015074	789624	4	269,211,192,352,	0,1046,2643,8271,
#Partially deleted in new
chr19	23046957	23061752	chr19:23046957-23061752	0	-	23046957	23046957	8553170	3	139,145,142,	0,13216,14653,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	23054822	23061265	chr19:23054822-23061265	3	-	23054822	23054822	789624	8	508,309,107,209,115,145,352,93,	0,659,1480,2189,3642,5351,5824,6350,
#Partially deleted in new
chr19	23068472	23071442	chr19:23068472-23071442	3	-	23068472	23068472	8553170	4	92,139,157,122,	0,862,1948,2848,
#Partially deleted in new
chr19	23069248	23071476	chr19:23069248-23071476	0	-	23069248	23069248	8553170	3	225,157,156,	0,1172,2072,
#Partially deleted in new
chr19	23075200	23095616	chr19:23075200-23095616	3	+	23075200	23075200	8553170	4	187,143,178,73,	0,19811,20062,20343,
#Partially deleted in new
chr19	23075209	23136106	chr19:23075209-23136106	1	+	23134172	23136051	789624	3	178,127,159,	0,58870,60738,
#Partially deleted in new
chr19	23075210	23100361	chr19:23075210-23100361	1	+	23075210	23075210	8553170	3	177,74,312,	0,23129,24839,
#Partially deleted in new
chr19	23116974	23147219	chr19:23116974-23147219	3	+	23117173	23146556	789624	4	202,127,96,1949,	0,17105,18973,28296,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	23123187	23124088	chr19:23123187-23124088	7	-	23123187	23123187	16724991	1	901,	0,
#Partially deleted in new
chr19	23125664	23128543	chr19:23125664-23128543	7	+	23125664	23125664	16724991	2	156,740,	0,2139,
#Partially deleted in new
chr19	23126568	23127792	chr19:23126568-23127792	7	-	23126568	23126568	16724991	1	1224,	0,
#Partially deleted in new
chr19	23134186	23144249	chr19:23134186-23144249	0	+	23134186	23143698	789624	3	20,96,676,	0,1761,9387,
#Deleted in new
chr19	23204009	23204556	chr19:23204009-23204556	7	+	23204009	23204009	16724991	1	547,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	23221598	23250360	chr19:23221598-23250360	3	-	23222384	23250242	789624	4	2420,96,127,121,	0,9667,10568,28641,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	23223929	23250388	chr19:23223929-23250388	0	-	23223929	23232278	789624	5	89,96,127,122,149,	0,7336,8237,18659,26310,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	23230859	23250390	chr19:23230859-23250390	1	-	23231257	23250242	789624	3	502,127,151,	0,1307,19380,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	23236307	23236851	chr19:23236307-23236851	7	+	23236307	23236307	16724991	1	544,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	23255052	23257939	chr19:23255052-23257939	7	-	23255052	23255052	16724991	1	2887,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	23255147	23255434	chr19:23255147-23255434	5	-	23255147	23255147	16724991	1	287,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	23257254	23274232	chr19:23257254-23274232	3	-	23257254	23257254	8553170	3	342,75,157,	0,12963,16821,
#Partially deleted in new
chr19	23259905	23274251	chr19:23259905-23274251	3	-	23259905	23259905	789624	4	211,71,125,176,	0,958,1714,14170,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	23259960	23262634	chr19:23259960-23262634	1	-	23259960	23259960	8553170	2	974,1015,	0,1659,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	23260658	23274248	chr19:23260658-23274248	1	-	23260658	23260658	8553170	3	276,125,173,	0,961,13417,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	23261223	23263874	chr19:23261223-23263874	0	-	23261223	23261223	8553170	1	2651,	0,
#Partially deleted in new
chr19	23261354	23274247	chr19:23261354-23274247	1	-	23261354	23261354	8553170	2	390,172,	0,12721,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	23269162	23274196	chr19:23269162-23274196	1	-	23269162	23269162	8553170	3	728,75,121,	0,1055,4913,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	23269762	23274196	chr19:23269762-23274196	1	-	23269762	23269762	8553170	3	530,101,121,	0,2856,4313,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	23269885	23274247	chr19:23269885-23274247	1	-	23269885	23269885	8553170	2	407,172,	0,4190,
#Deleted in new
chr19	23288619	23289345	chr19:23288619-23289345	7	+	23288619	23288619	16724991	1	726,	0,
#Deleted in new
chr19	23290848	23291017	chr19:23290848-23291017	7	+	23290848	23290848	16724991	1	169,	0,
#Partially deleted in new
chr19	23304990	23310573	chr19:23304990-23310573	0	-	23304990	23304990	8553170	3	141,174,26,	0,3933,5557,
#Partially deleted in new
chr19	23304998	23310563	chr19:23304998-23310563	0	-	23304998	23304998	8553170	4	133,87,174,16,	0,2317,3925,5549,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	23306808	23358845	chr19:23306808-23358845	0	-	23306808	23306808	8553170	2	2289,116,	0,51921,
#Deleted in new
chr19	23308743	23310622	chr19:23308743-23310622	0	-	23308743	23308743	8553170	2	354,75,	0,1804,
#Partially deleted in new
chr19	23308902	23395471	chr19:23308902-23395471	0	-	23308902	23308902	8553170	4	195,96,127,147,	0,64839,65735,86422,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	23323967	23329101	chr19:23323967-23329101	3	+	23323967	23323967	8553170	1	5134,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	23337830	23340137	chr19:23337830-23340137	0	-	23337830	23337830	8553170	1	2307,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	23338748	23395457	chr19:23338748-23395457	1	-	23338938	23395354	789624	4	306,96,127,133,	0,34993,35889,56576,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	23357695	23395560	chr19:23357695-23395560	3	-	23359402	23395354	789624	4	5030,96,127,236,	0,16046,16942,37629,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	23359402	23395446	chr19:23359402-23395446	1	-	23359402	23395354	789624	3	3323,127,122,	0,15235,35922,
#Partially deleted in new
chr19	23362124	23395418	chr19:23362124-23395418	0	-	23362124	23362681	789624	2	601,94,	0,33200,
#Deleted in new
chr19	23380316	23380876	chr19:23380316-23380876	7	+	23380316	23380316	16724991	1	560,	0,
#Deleted in new
chr19	23384529	23385293	chr19:23384529-23385293	7	+	23384529	23384529	16724991	1	764,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	23399232	23416071	chr19:23399232-23416071	0	-	23399232	23399232	789624	5	1815,288,28,78,178,	0,3973,4487,6025,16661,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	23399469	23408091	chr19:23399469-23408091	1	-	23399469	23399469	8553170	8	1578,336,288,28,158,78,106,194,	0,2707,3736,4250,5481,5788,6530,8428,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	23400983	23416059	chr19:23400983-23416059	3	-	23400983	23400983	789624	6	64,304,28,158,78,166,	0,2222,2736,3967,4274,14910,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	23400986	23416075	chr19:23400986-23416075	0	-	23400986	23400986	8553170	4	61,288,28,182,	0,2219,2733,14907,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	23402361	23416074	chr19:23402361-23416074	0	-	23402361	23402361	8553170	3	151,288,171,	0,844,13542,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	23402416	23416065	chr19:23402416-23416065	0	-	23402416	23402416	8553170	3	96,304,172,	0,789,13477,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	23403211	23416074	chr19:23403211-23416074	0	-	23403211	23403211	8553170	4	282,28,78,171,	0,508,2046,12692,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	23403279	23416065	chr19:23403279-23416065	0	-	23403279	23403279	8553170	3	230,78,162,	0,1978,12624,
#Partially deleted in new
chr19	23404751	23416047	chr19:23404751-23416047	0	-	23404751	23404751	8553170	4	95,158,78,154,	0,199,506,11142,
#Deleted in new
chr19	23444261	23445189	chr19:23444261-23445189	7	+	23444261	23444261	16724991	1	928,	0,
#Deleted in new
chr19	23479761	23480468	chr19:23479761-23480468	7	-	23479761	23479761	16724991	2	84,124,	0,583,
#Partially deleted in new
chr19	23492427	23512656	chr19:23492427-23512656	7	-	23492427	23492427	16724991	4	1265,96,127,144,	0,12847,13427,20085,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	23525630	23687197	chr19:23525630-23687197	1	-	23526556	23687033	789624	5	957,97,96,127,167,	0,2287,136483,137401,161400,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	23534179	23687212	chr19:23534179-23687212	1	-	23534186	23687033	789624	4	138,96,127,182,	0,127934,128852,152851,
#Deleted in new
chr19	23596121	23598159	chr19:23596121-23598159	7	+	23596121	23596121	16724991	2	1122,473,	0,1565,
#Deleted in new
chr19	23597340	23597592	chr19:23597340-23597592	7	+	23597340	23597340	16724991	1	252,	0,
#Deleted in new
chr19	23602566	23603106	chr19:23602566-23603106	7	+	23602566	23602566	16724991	1	540,	0,
#Partially deleted in new
chr19	23652800	23687202	chr19:23652800-23687202	3	-	23653225	23687033	789624	4	1906,96,127,172,	0,9313,10231,34230,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	23652907	23657134	chr19:23652907-23657134	0	-	23652907	23652907	8553170	1	4227,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	23654411	23686381	chr19:23654411-23686381	0	-	23654411	23662132	789624	4	295,96,127,203,	0,7702,8620,31767,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	23654545	23687140	chr19:23654545-23687140	0	-	23656781	23687033	789624	5	161,101,96,127,110,	0,2176,7568,8486,32485,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	23658384	23687188	chr19:23658384-23687188	1	-	23658592	23687033	789624	4	288,96,127,158,	0,3729,4647,28646,
#Partially deleted in new
chr19	23661934	23687220	chr19:23661934-23687220	1	-	23662105	23687033	789624	3	275,127,190,	0,1097,25096,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	23739194	23758891	chr19:23739194-23758891	3	-	23743611	23758749	789624	4	6129,96,127,145,	0,15628,16230,19552,
#Partially deleted in new
chr19	23744885	23758840	chr19:23744885-23758840	0	-	23744885	23754841	789624	3	438,96,94,	0,9937,13861,
#Partially deleted in new
chr19	23744963	23758837	chr19:23744963-23758837	0	-	23744963	23754841	789624	3	360,75,91,	0,9859,13783,
#Partially deleted in new
chr19	23762943	23832196	chr19:23762943-23832196	7	+	23762943	23762943	16724991	4	191,114,96,600,	0,44882,45775,68653,
#Partially deleted in new
chr19	23763011	23832196	chr19:23763011-23832196	4	+	23763011	23763011	16724991	2	123,600,	0,68585,
#Partially deleted in new
chr19	23782080	23809515	chr19:23782080-23809515	4	+	23782080	23782080	16724991	3	419,114,797,	0,25745,26638,
#Partially deleted in new
chr19	23790771	23833314	chr19:23790771-23833314	5	+	23790771	23790771	16724991	4	3,114,96,1718,	0,17054,17947,40825,
#Partially deleted in new
chr19	23798923	23799477	chr19:23798923-23799477	7	-	23798923	23798923	16724991	1	554,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	23817598	23874701	chr19:23817598-23874701	3	-	23817598	23817598	8553170	4	1847,167,127,150,	0,6141,9457,56953,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	23827161	23828049	chr19:23827161-23828049	7	+	23827161	23827161	16724991	1	888,	0,
#Partially deleted in new
chr19	23842548	23843230	chr19:23842548-23843230	7	+	23842548	23842548	16724991	2	124,51,	0,631,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	23914875	23923893	chr19:23914875-23923893	1	+	23914994	23923476	789624	4	122,127,96,461,	0,4497,5111,8557,
#Partially deleted in new
chr19	23914876	23945159	chr19:23914876-23945159	1	+	23914994	23944757	789624	5	121,127,96,96,407,	0,4496,5110,28617,29876,
#Partially deleted in new
chr19	23914881	23935474	chr19:23914881-23935474	3	+	23914994	23935474	789624	7	116,127,96,1610,83,43,255,	0,4491,5105,17461,19232,19388,20338,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	23914881	23921541	chr19:23914881-23921541	1	+	23914994	23920090	789624	3	116,127,1555,	0,4491,5105,
#Partially deleted in new
chr19	23914889	23934484	chr19:23914889-23934484	1	+	23914994	23933967	789624	4	108,127,96,2142,	0,4483,5097,17453,
#Partially deleted in new
chr19	23914918	23944713	chr19:23914918-23944713	1	+	23914994	23943597	789624	4	79,127,96,1220,	0,4454,5068,28575,
#Partially deleted in new
chr19	23919080	23957930	chr19:23919080-23957930	3	-	23919080	23919080	8553170	3	1118,267,200,	0,33089,38650,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	23927787	23929287	chr19:23927787-23929287	3	+	23927787	23927787	8553170	1	1500,	0,
#Partially deleted in new
chr19	23935219	23936173	chr19:23935219-23936173	7	+	23935219	23935219	16724991	1	954,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	23949578	23957734	chr19:23949578-23957734	1	-	23949578	23949578	8553170	3	648,267,4,	0,2591,8152,
#Partially deleted in new
chr19	24004357	24004507	chr19:24004357-24004507	7	-	24004357	24004357	16724991	1	150,	0,
#Partially deleted in new
chr19	24033404	24129961	chr19:24033404-24129961	1	+	24106032	24127980	789624	5	217,96,127,96,3708,	0,12779,72535,73143,92849,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	24033444	24066909	chr19:24033444-24066909	0	+	24033444	24033444	8553170	4	177,96,144,1447,	0,12739,15960,32018,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	24078480	24080669	chr19:24078480-24080669	3	+	24078480	24078480	8553170	1	2189,	0,
#Partially deleted in new
chr19	24087159	24129961	chr19:24087159-24129961	1	+	24106609	24127980	789624	3	178,96,3708,	0,19388,39094,
#Partially deleted in new
chr19	24087159	24129961	chr19:24087159-24129961	1	+	24126255	24127980	789624	2	178,3708,	0,39094,
#Partially deleted in new
chr19	24087183	24107349	chr19:24087183-24107349	1	+	24087307	24107238	789624	4	154,127,96,134,	0,18756,19364,20032,
#Partially deleted in new
chr19	24087192	24129852	chr19:24087192-24129852	3	+	24087307	24127980	789624	4	145,127,96,3599,	0,18747,19355,39061,
#Partially deleted in new
chr19	24098424	24098980	chr19:24098424-24098980	7	-	24098424	24098424	16724991	1	556,	0,
#Partially deleted in new
chr19	24104185	24107352	chr19:24104185-24107352	0	+	24104185	24104185	8553170	1	3167,	0,
#Deleted in new
chr19	24146700	24147081	chr19:24146700-24147081	3	+	24146700	24146700	8553170	1	381,	0,
#Deleted in new
chr19	24162369	24163425	chr19:24162369-24163425	7	-	24162369	24162369	16724991	1	1056,	0,
#Duplicated in new
chr19	27638482	27640638	chr19:27638482-27640638	0	-	27638482	27638482	8553170	2	196,204,	0,1952,
#Duplicated in new
chr19	27638482	27640638	chr19:27638482-27640638	1	-	27638482	27638482	8553170	2	196,261,	0,1895,
#Duplicated in new
chr19	27638508	27646483	chr19:27638508-27646483	2	-	27638508	27638508	8553170	2	170,138,	0,7837,
#Duplicated in new
chr19	27639299	27639665	chr19:27639299-27639665	3	-	27639299	27639299	8553170	1	366,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	27684579	27793378	chr19:27684579-27793378	3	-	27684579	27684579	8553170	3	28,155,379,	0,16911,108420,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	27715785	27793394	chr19:27715785-27793394	1	-	27715785	27715785	8553170	4	73,172,243,395,	0,17010,30312,77214,
#Partially deleted in new
chr19	27723028	27771832	chr19:27723028-27771832	0	-	27723028	27723028	8553170	3	152,172,169,	0,9767,48635,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	27730272	27746230	chr19:27730272-27746230	1	-	27730272	27730272	8553170	3	2175,172,133,	0,2523,15825,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	27757183	27760849	chr19:27757183-27760849	3	-	27757183	27757183	8553170	1	3666,	0,
#Partially deleted in new
chr19	27773962	27793378	chr19:27773962-27793378	0	-	27773962	27773962	8553170	2	290,379,	0,19037,
#Partially deleted in new
chr19	27775756	27793371	chr19:27775756-27793371	1	-	27775756	27775756	8553170	2	1882,372,	0,17243,
#Partially deleted in new
chr19	27778639	27793031	chr19:27778639-27793031	0	-	27778639	27778639	8553170	2	404,32,	0,14360,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	27790490	27793940	chr19:27790490-27793940	1	-	27790490	27790490	789624	3	1411,233,409,	0,2509,3041,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	27791702	27793378	chr19:27791702-27793378	0	-	27791702	27791702	8553170	2	199,379,	0,1297,
#Partially deleted in new
chr19	27793462	27918863	chr19:27793462-27918863	1	+	27793462	27793462	8553170	4	188,81,205,181,	0,107326,107537,125220,
#Deleted in new
chr19	27793482	27798282	chr19:27793482-27798282	1	+	27793482	27793482	8553170	2	127,529,	0,4271,
#Partially deleted in new
chr19	27793487	27984984	chr19:27793487-27984984	3	+	27793487	27793487	8553170	6	163,79,75,101,163,343,	0,126292,162714,169778,189923,191154,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	27793493	27806782	chr19:27793493-27806782	1	+	27793493	27793493	789624	2	157,1178,	0,12111,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	27793494	27799403	chr19:27793494-27799403	1	+	27793494	27793494	8553170	3	156,423,186,	0,4259,5723,
#Deleted in new
chr19	27793502	27794965	chr19:27793502-27794965	1	+	27793502	27793502	8553170	2	148,284,	0,1179,
#Partially deleted in new
chr19	27793522	27805772	chr19:27793522-27805772	1	+	27793522	27793522	8553170	3	128,423,168,	0,4231,12082,
#Deleted in new
chr19	27793894	27798012	chr19:27793894-27798012	1	+	27793894	27793894	8553170	2	228,259,	0,3859,
#Deleted in new
chr19	27794023	27796424	chr19:27794023-27796424	1	+	27794023	27794023	8553170	1	2401,	0,
#Partially deleted in new
chr19	27794023	27918797	chr19:27794023-27918797	1	+	27794023	27794023	8553170	4	99,81,205,115,	0,106765,106976,124659,
#Deleted in new
chr19	27794038	27795152	chr19:27794038-27795152	1	+	27794038	27794038	8553170	2	84,455,	0,659,
#Deleted in new
chr19	27794038	27795153	chr19:27794038-27795153	1	+	27794038	27794038	8553170	2	104,472,	0,643,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	27794048	27799466	chr19:27794048-27799466	3	+	27794048	27794048	8553170	3	74,423,249,	0,3705,5169,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	27802837	27803472	chr19:27802837-27803472	3	+	27802837	27802837	8553170	1	635,	0,
#Deleted in new
chr19	27803537	27804060	chr19:27803537-27804060	7	+	27803537	27803537	16724991	1	523,	0,
#Deleted in new
chr19	27805422	27806205	chr19:27805422-27806205	7	-	27805422	27805422	16724991	1	783,	0,
#Deleted in new
chr19	27892494	27898927	chr19:27892494-27898927	7	-	27892494	27892494	16724991	8	76,86,122,72,44,102,917,149,	0,353,771,999,2492,3391,4020,6284,
#Partially deleted in new
chr19	27902594	27956684	chr19:27902594-27956684	7	+	27902594	27902594	16724991	2	100,483,	0,53607,
#Deleted in new
chr19	27908355	27908554	chr19:27908355-27908554	7	-	27908355	27908355	16724991	1	199,	0,
#Partially deleted in new
chr19	27918942	27929370	chr19:27918942-27929370	7	+	27918942	27918942	16724991	5	112,122,72,84,235,	0,839,7074,8956,10193,
#Partially deleted in new
chr19	27936760	27984743	chr19:27936760-27984743	5	+	27936760	27936760	16724991	10	211,74,33,99,33,51,120,164,163,112,	0,19441,21746,26505,29379,32798,33644,37936,46650,47871,
#Deleted in new
chr19	27983031	27983332	chr19:27983031-27983332	7	-	27983031	27983031	16724991	1	301,	0,
#Partially deleted in new
chr19	28065266	28125394	chr19:28065266-28125394	0	+	28065266	28065266	8553170	4	99,57,244,140,	0,56967,58346,59988,
#Partially deleted in new
chr19	28065266	28125430	chr19:28065266-28125430	3	+	28065266	28065266	8553170	4	99,54,244,176,	0,56970,58346,59988,
#Partially deleted in new
chr19	28294092	28313500	chr19:28294092-28313500	3	-	28294092	28294092	8553170	3	442,45,88,	0,18755,19320,
#Partially deleted in new
chr19	28332796	28386204	chr19:28332796-28386204	1	-	28332796	28332796	8553170	5	33,253,84,99,93,	0,4695,42496,45623,53315,
#Partially deleted in new
chr19	28394850	28396428	chr19:28394850-28396428	3	-	28394850	28394850	8553170	2	455,101,	0,1477,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	28418482	28429490	chr19:28418482-28429490	3	-	28418482	28418482	8553170	2	1429,141,	0,10867,
#Duplicated in new
chr19	28435387	28727680	chr19:28435387-28727680	3	-	28435387	28435387	789624	10	1428,219,234,211,379,211,115,171,44,101,	0,1528,2097,25899,31014,287182,288816,289431,290906,292192,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	28437059	28535277	chr19:28437059-28535277	3	-	28437059	28437059	8553170	4	75,137,379,178,	0,522,29342,98040,
#Partially deleted in new
chr19	28457010	28466693	chr19:28457010-28466693	0	-	28457010	28457010	8553170	3	66,211,292,	0,4276,9391,
#Partially deleted in new
chr19	28460338	28466682	chr19:28460338-28466682	1	-	28460338	28460338	8553170	3	107,211,281,	0,948,6063,
#Partially deleted in new
chr19	28491863	28632728	chr19:28491863-28632728	3	-	28491863	28491863	8553170	2	1160,109,	0,140756,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	28509237	28518728	chr19:28509237-28518728	3	+	28509237	28509237	8553170	2	151,428,	0,9063,
#Partially deleted in new
chr19	28602378	28648303	chr19:28602378-28648303	3	-	28602378	28602378	8553170	2	165,20,	0,45905,
#Partially deleted in new
chr19	28683070	28724989	chr19:28683070-28724989	7	-	28683070	28683070	16724991	12	183,151,88,77,130,76,163,216,93,211,115,171,	0,4166,4685,17879,21185,23888,24668,24929,28006,39499,41133,41748,
#Partially deleted in new
chr19	28704248	28724340	chr19:28704248-28724340	4	-	28704248	28704248	16724991	4	137,162,211,137,	0,17705,18321,19955,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	28724275	28727777	chr19:28724275-28727777	5	-	28724275	28724275	16724991	4	43,171,39,198,	0,543,2023,3304,
#Partially deleted in new
chr19	28790811	28792871	chr19:28790811-28792871	7	-	28790811	28790811	16724991	2	1376,24,	0,2036,
#Partially deleted in new
chr19	28869795	28879170	chr19:28869795-28879170	3	+	28869795	28869795	8553170	3	126,76,235,	0,3926,9140,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	28883429	28953245	chr19:28883429-28953245	3	+	28883429	28883429	8553170	3	362,129,46,	0,53447,69770,
#Partially deleted in new
chr19	28892930	28895949	chr19:28892930-28895949	3	+	28892930	28892930	8553170	2	29,458,	0,2561,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	28949436	28950200	chr19:28949436-28950200	3	-	28949436	28949436	8553170	2	185,55,	0,709,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	28960505	28964943	chr19:28960505-28964943	3	-	28960505	28960505	8553170	3	304,62,33,	0,3934,4405,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	28965130	28969148	chr19:28965130-28969148	3	+	28965130	28965130	789624	2	225,3219,	0,799,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	28968467	28970299	chr19:28968467-28970299	0	+	28968467	28968467	8553170	3	575,168,99,	0,1204,1733,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	28968896	28970670	chr19:28968896-28970670	1	+	28968896	28968896	789624	4	146,168,67,267,	0,775,1304,1507,
#Partially deleted in new
chr19	28969705	28970672	chr19:28969705-28970672	0	+	28969705	28969705	8553170	2	134,269,	0,698,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	28969742	28970672	chr19:28969742-28970672	0	+	28969742	28969742	8553170	3	97,67,150,	0,458,780,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	28970199	28970874	chr19:28970199-28970874	0	+	28970199	28970199	8553170	2	68,324,	0,351,
#Deleted in new
chr19	29001669	29001775	chr19:29001669-29001775	7	+	29001669	29001669	16724991	1	106,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	29002554	29013955	chr19:29002554-29013955	3	+	29002554	29002554	789624	5	69,139,79,216,1445,	0,1047,1619,8176,9956,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	29002555	29011017	chr19:29002555-29011017	0	+	29002555	29002555	8553170	4	68,139,79,287,	0,1046,1618,8175,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	29002591	29012614	chr19:29002591-29012614	0	+	29002591	29002591	8553170	4	32,139,216,104,	0,1010,8139,9919,
#Partially deleted in new
chr19	29205320	29213541	chr19:29205320-29213541	3	-	29207547	29213118	0	2	2838,637,	0,7584,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	29213234	29215815	chr19:29213234-29215815	3	+	29213234	29213234	8553170	2	174,535,	0,2046,
#Partially deleted in new
chr19	29213282	29215489	chr19:29213282-29215489	1	+	29213282	29213282	8553170	3	126,108,209,	0,431,1998,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	29220863	29221666	chr19:29220863-29221666	3	+	29220863	29220863	8553170	1	803,	0,
#Deleted in new
chr19	29222541	29223137	chr19:29222541-29223137	3	+	29222541	29222541	8553170	1	596,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	29233089	29233385	chr19:29233089-29233385	3	-	29233089	29233089	8553170	1	296,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	29287010	29525752	chr19:29287010-29525752	3	-	29287010	29287010	789624	10	552,188,194,250,545,162,90,192,80,329,	0,104410,105871,108323,109396,110159,111614,125764,141720,238413,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	29412230	29525734	chr19:29412230-29525734	0	-	29412230	29412230	8553170	3	736,80,311,	0,16500,113193,
#Deleted in new
chr19	29448037	29448380	chr19:29448037-29448380	3	+	29448037	29448037	8553170	2	61,189,	0,154,
#Partially deleted in new
chr19	29489774	29526948	chr19:29489774-29526948	3	-	29489774	29489774	8553170	2	214,329,	0,36845,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	29506965	29509041	chr19:29506965-29509041	3	-	29506965	29506965	8553170	1	2076,	0,
#Partially deleted in new
chr19	29526498	29564479	chr19:29526498-29564479	3	+	29526583	29563934	789624	5	167,185,30,472,634,	0,712,1934,3320,37347,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	29604016	29615800	chr19:29604016-29615800	3	+	29606318	29615380	789624	7	2309,53,224,78,62,102,557,	0,4640,6392,7845,8100,9854,11227,
#Partially deleted in new
chr19	29606282	29609242	chr19:29606282-29609242	0	+	29606282	29606282	8553170	2	43,586,	0,2374,
#Partially deleted in new
chr19	29606282	29615266	chr19:29606282-29615266	0	+	29606318	29615266	789624	7	43,53,224,72,62,102,23,	0,2374,4126,5585,5834,7588,8961,
#Partially deleted in new
chr19	29606282	29615436	chr19:29606282-29615436	0	+	29606318	29612130	789624	6	43,53,49,62,102,193,	0,2374,4126,5834,7588,8961,
#Partially deleted in new
chr19	29606293	29617237	chr19:29606293-29617237	1	+	29612126	29615380	789624	6	32,53,78,62,102,1994,	0,2363,5568,5823,7577,8950,
#Partially deleted in new
chr19	29606297	29613965	chr19:29606297-29613965	0	+	29606318	29610442	789624	6	28,88,224,78,62,95,	0,2359,4111,5564,5819,7573,
#Partially deleted in new
chr19	29606302	29615458	chr19:29606302-29615458	0	+	29606302	29606302	8553170	7	23,53,313,78,62,102,215,	0,2354,4017,5559,5814,7568,8941,
#Partially deleted in new
chr19	29606303	29611122	chr19:29606303-29611122	0	+	29606303	29606303	8553170	3	22,53,714,	0,2353,4105,
#Partially deleted in new
chr19	29606320	29612119	chr19:29606320-29612119	0	+	29606395	29612119	789624	5	169,53,224,78,3,	0,2336,4088,5541,5796,
#Partially deleted in new
chr19	29606371	29613239	chr19:29606371-29613239	0	+	29606371	29606371	8553170	7	118,53,45,224,78,62,37,	0,2285,3868,4037,5490,5745,6831,
#Partially deleted in new
chr19	29610251	29615294	chr19:29610251-29615294	0	+	29610251	29610251	8553170	6	33,224,78,62,102,51,	0,157,1610,1865,3619,4992,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	29611513	29613972	chr19:29611513-29613972	0	+	29611513	29611513	8553170	3	426,62,102,	0,603,2357,
#Partially deleted in new
chr19	29613824	29615703	chr19:29613824-29615703	0	+	29613824	29613824	8553170	2	148,460,	0,1419,
#Partially deleted in new
chr19	29665055	29675457	chr19:29665055-29675457	3	+	29673839	29674679	789624	2	450,1634,	0,8768,
#Partially deleted in new
chr19	29665458	29674843	chr19:29665458-29674843	1	+	29673839	29674679	789624	2	337,1020,	0,8365,
#Partially deleted in new
chr19	29665500	29674085	chr19:29665500-29674085	0	+	29673839	29674085	789624	2	281,262,	0,8323,
#Partially deleted in new
chr19	29666873	29674223	chr19:29666873-29674223	0	+	29673839	29674223	789624	2	307,400,	0,6950,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	29698885	29715789	chr19:29698885-29715789	3	-	29702711	29708413	789624	3	4092,170,227,	0,9368,16677,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	29698885	29715056	chr19:29698885-29715056	1	-	29702711	29702945	789624	2	4092,150,	0,16021,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	29700813	29715254	chr19:29700813-29715254	1	-	29702711	29708413	789624	3	2164,170,130,	0,7440,14311,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	29701162	29715221	chr19:29701162-29715221	1	-	29702711	29702945	789624	2	1815,97,	0,13962,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	29701688	29715224	chr19:29701688-29715224	1	-	29702758	29708413	789624	4	1104,130,170,100,	0,1159,6565,13436,
#Partially deleted in new
chr19	29702340	29715457	chr19:29702340-29715457	0	-	29702340	29702340	8553170	2	637,551,	0,12566,
#Partially deleted in new
chr19	29702402	29715056	chr19:29702402-29715056	1	-	29702711	29714929	789624	3	575,170,150,	0,5851,12504,
#Partially deleted in new
chr19	29702818	29708640	chr19:29702818-29708640	0	-	29702818	29708413	789624	2	159,387,	0,5435,
#Partially deleted in new
chr19	29702841	29715275	chr19:29702841-29715275	0	-	29705347	29708413	789624	4	136,121,170,151,	0,2432,5412,12283,
#Partially deleted in new
chr19	29811897	29824308	chr19:29811897-29824308	3	+	29812555	29823777	0	12	255,47,88,69,146,136,147,96,135,112,158,654,	0,634,791,1071,5239,5508,8804,9824,10098,10342,10548,11757,
#Partially deleted in new
chr19	29812003	29821768	chr19:29812003-29821768	0	+	29812555	29821768	789624	8	149,47,88,60,146,136,147,47,	0,528,685,974,5133,5402,8698,9718,
#Partially deleted in new
chr19	29812653	29824308	chr19:29812653-29824308	1	+	29812710	29823777	789624	9	123,69,146,136,147,96,112,158,654,	0,315,4483,4752,8048,9068,9586,9792,11001,
#Partially deleted in new
chr19	29812653	29824212	chr19:29812653-29824212	1	+	29812710	29823777	0	10	123,69,146,136,147,96,135,112,158,558,	0,315,4483,4752,8048,9068,9342,9586,9792,11001,
#Deleted in new
chr19	29812724	29813331	chr19:29812724-29813331	0	+	29812724	29812724	8553170	2	52,363,	0,244,
#Partially deleted in new
chr19	29817202	29824010	chr19:29817202-29824010	0	+	29817202	29823777	789624	7	80,136,147,96,112,158,356,	0,203,3499,4519,5037,5243,6452,
#Partially deleted in new
chr19	29821731	29824280	chr19:29821731-29824280	0	+	29821731	29821731	8553170	4	399,112,158,626,	0,508,714,1923,
#Deleted in new
chr19	29901695	29901869	chr19:29901695-29901869	7	-	29901695	29901695	16724991	1	174,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	29915861	29917830	chr19:29915861-29917830	3	+	29915861	29915861	8553170	1	1969,	0,
#Deleted in new
chr19	29921181	29921653	chr19:29921181-29921653	7	+	29921181	29921181	16724991	1	472,	0,
#Partially deleted in new
chr19	29923643	30015695	chr19:29923643-30015695	1	+	29923691	30015592	789624	11	111,35,79,136,92,58,169,349,143,247,160,	0,47549,61579,62638,81717,82007,83826,85361,87450,88641,91892,
#Partially deleted in new
chr19	29923656	29986377	chr19:29923656-29986377	0	+	29985298	29986377	789624	5	98,35,206,79,96,	0,47536,56502,61566,62625,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	29923690	30005436	chr19:29923690-30005436	0	+	29985298	30005436	789624	6	64,96,35,79,136,76,	0,34286,47502,61532,62591,81670,
#Partially deleted in new
chr19	29923711	29937997	chr19:29923711-29937997	0	+	29923711	29923711	8553170	2	43,355,	0,13931,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	29923733	29925897	chr19:29923733-29925897	0	+	29923733	29925566	789624	2	21,364,	0,1800,
#Partially deleted in new
chr19	29942250	30016608	chr19:29942250-30016608	3	+	29942547	30015069	789624	11	414,35,79,136,92,58,169,349,143,247,1722,	0,28942,42972,44031,63110,63400,65219,66754,68843,70034,72636,
#Partially deleted in new
chr19	29942260	30015704	chr19:29942260-30015704	0	+	29942547	29985237	789624	10	404,79,136,92,58,169,349,143,247,818,	0,42962,44021,63100,63390,65209,66744,68833,70024,72626,
#Partially deleted in new
chr19	29942310	30005706	chr19:29942310-30005706	0	+	29942547	29980159	789624	7	354,35,92,79,136,92,56,	0,28882,37848,42912,43971,63050,63340,
#Deleted in new
chr19	29956368	29956988	chr19:29956368-29956988	7	-	29956368	29956368	16724991	1	620,	0,
#Partially deleted in new
chr19	29971092	30007547	chr19:29971092-30007547	0	+	29985298	30007547	789624	6	135,79,136,92,58,78,	0,14130,15189,34268,34558,36377,
#Partially deleted in new
chr19	29983232	30007579	chr19:29983232-30007579	0	+	29983232	29983232	8553170	6	84,79,136,92,58,110,	0,1990,3049,22128,22418,24237,
#Partially deleted in new
chr19	30004294	30009019	chr19:30004294-30009019	0	+	30004294	30004294	8553170	5	262,92,58,169,15,	0,1066,1356,3175,4710,
#Partially deleted in new
chr19	30009079	30012899	chr19:30009079-30012899	0	+	30009079	30012552	789624	3	274,143,615,	0,2014,3205,
#Partially deleted in new
chr19	30012422	30015026	chr19:30012422-30015026	0	+	30012422	30014192	789624	3	109,42,140,	0,1758,2464,
#Deleted in new
chr19	30028740	30029916	chr19:30028740-30029916	3	-	30028740	30028740	8553170	1	1176,	0,
#Deleted in new
chr19	30037284	30037411	chr19:30037284-30037411	7	+	30037284	30037284	16724991	1	127,	0,
#Deleted in new
chr19	30037422	30038181	chr19:30037422-30038181	7	+	30037422	30037422	16724991	1	759,	0,
#Partially deleted in new
chr19	30219665	30228715	chr19:30219665-30228715	3	-	30219665	30219665	8553170	2	125,295,	0,8755,
#Partially deleted in new
chr19	30228289	30300669	chr19:30228289-30300669	0	+	30228289	30228289	8553170	4	384,70,89,244,	0,55782,67865,72136,
#Partially deleted in new
chr19	30228513	30548468	chr19:30228513-30548468	0	+	30443562	30548468	789624	6	160,70,117,2172,153,526,	0,55558,123854,215047,306333,319429,
#Partially deleted in new
chr19	30228553	30443978	chr19:30228553-30443978	0	+	30443562	30443978	789624	3	120,117,418,	0,123814,215007,
#Partially deleted in new
chr19	30372411	30558059	chr19:30372411-30558059	3	+	30443562	30557164	789624	5	145,2172,153,1572,903,	0,71149,162435,175531,184745,
#Partially deleted in new
chr19	30549345	30713538	chr19:30549345-30713538	0	+	30549345	30711001	789624	2	169,2782,	0,161411,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	30553955	30558058	chr19:30553955-30558058	3	+	30553955	30553955	8553170	1	4103,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	30665273	30668647	chr19:30665273-30668647	3	-	30665273	30665273	8553170	2	487,67,	0,3307,
#Partially deleted in new
chr19	30850974	30872507	chr19:30850974-30872507	3	+	30850974	30850974	8553170	2	106,461,	0,21072,
#Partially deleted in new
chr19	30907198	30909155	chr19:30907198-30909155	3	+	30907198	30907198	8553170	2	80,305,	0,1652,
#Partially deleted in new
chr19	30946581	30957192	chr19:30946581-30957192	3	+	30946581	30946581	8553170	2	92,469,	0,10142,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	31100303	31147981	chr19:31100303-31147981	3	+	31100303	31100303	8553170	6	191,112,3174,126,171,1285,	0,18933,25383,43644,46095,46393,
#Partially deleted in new
chr19	31167515	31207663	chr19:31167515-31207663	3	+	31167515	31167515	789624	5	74,149,114,175,165,	0,169,28074,37230,39983,
#Partially deleted in new
chr19	31274944	31349547	chr19:31274944-31349547	3	-	31276546	31349219	0	2	4808,368,	0,74235,
#Partially deleted in new
chr19	31279193	31305763	chr19:31279193-31305763	0	-	31279193	31279193	8553170	2	559,276,	0,26294,
#Partially deleted in new
chr19	31308344	31349255	chr19:31308344-31349255	1	-	31308647	31349219	789624	2	365,76,	0,40835,
#Partially deleted in new
chr19	31348880	31417794	chr19:31348880-31417794	3	+	31348880	31348880	8553170	4	37,214,116,193,	0,11487,56815,68721,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	31364296	31366098	chr19:31364296-31366098	3	+	31364296	31364296	8553170	1	1802,	0,
#Partially deleted in new
chr19	31421996	31427302	chr19:31421996-31427302	3	+	31421996	31421996	8553170	2	359,87,	0,5219,
#Deleted in new
chr19	31465652	31466431	chr19:31465652-31466431	3	+	31465652	31465652	8553170	2	140,153,	0,626,
#Partially deleted in new
chr19	31542038	31554797	chr19:31542038-31554797	3	+	31542038	31542038	8553170	3	282,63,215,	0,6469,12544,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	31588039	31595720	chr19:31588039-31595720	3	-	31588039	31588039	8553170	2	5559,117,	0,7564,
#Deleted in new
chr19	31592280	31593039	chr19:31592280-31593039	0	+	31592280	31592280	8553170	2	62,385,	0,374,
#Deleted in new
chr19	31655355	31655461	chr19:31655355-31655461	7	-	31655355	31655355	16724991	1	106,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	31787147	31787255	chr19:31787147-31787255	3	-	31787147	31787147	8553170	1	108,	0,
#Partially deleted in new
chr19	31859102	31945466	chr19:31859102-31945466	1	-	31859102	31859102	8553170	11	210,72,353,172,192,37,182,86,42,61,150,	0,769,27523,28652,51071,51474,63626,78113,82518,85272,86214,
#Partially deleted in new
chr19	31886703	31908284	chr19:31886703-31908284	3	-	31886703	31886703	8553170	3	275,172,89,	0,1051,21492,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	31922883	31945398	chr19:31922883-31945398	1	-	31922883	31922883	8553170	7	27,134,86,42,138,61,82,	0,7404,14332,18737,19426,21491,22433,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	31937150	32072080	chr19:31937150-32072080	3	-	31937150	31937150	8553170	8	151,138,61,91,179,78,133,225,	0,5159,7224,28683,29553,30405,73273,134705,
#Partially deleted in new
chr19	31965638	32072082	chr19:31965638-32072082	1	-	31965638	31965638	8553170	4	286,930,72,32,	0,1065,106217,106412,
#Partially deleted in new
chr19	31967098	32025791	chr19:31967098-32025791	0	-	31967098	31967098	8553170	3	535,35,77,	0,43423,58616,
#Partially deleted in new
chr19	32002490	32025777	chr19:32002490-32025777	0	-	32002490	32002490	8553170	3	282,133,63,	0,7933,23224,
#Partially deleted in new
chr19	32025861	32039643	chr19:32025861-32039643	1	+	32025861	32025861	789624	3	146,310,151,	0,11692,13631,
#Partially deleted in new
chr19	32025894	32039857	chr19:32025894-32039857	1	+	32025894	32025894	789624	3	113,154,365,	0,11659,13598,
#Partially deleted in new
chr19	32025981	32048883	chr19:32025981-32048883	3	+	32025981	32025981	789624	5	26,106,154,224,106,	0,11008,11572,18851,22796,
#Partially deleted in new
chr19	32040485	32048899	chr19:32040485-32048899	1	+	32040485	32040485	8553170	3	85,228,122,	0,4347,8292,
#Partially deleted in new
chr19	32048621	32056865	chr19:32048621-32056865	0	+	32048621	32048621	8553170	2	152,339,	0,7905,
#Deleted in new
chr19	32103582	32104724	chr19:32103582-32104724	3	+	32103582	32103582	8553170	2	341,191,	0,951,
#Deleted in new
chr19	32104536	32105163	chr19:32104536-32105163	1	+	32104536	32104536	8553170	2	164,243,	0,384,
#Partially deleted in new
chr19	32104979	32106537	chr19:32104979-32106537	0	+	32104979	32104979	8553170	2	20,88,	0,1470,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	32243964	32244083	chr19:32243964-32244083	7	-	32243964	32243964	16724991	1	119,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	32345593	32387667	chr19:32345593-32387667	3	+	32352830	32383083	789624	6	190,2129,118,115,135,4951,	0,7235,11022,14910,36873,37123,
#Partially deleted in new
chr19	32345624	32359793	chr19:32345624-32359793	0	+	32345624	32345624	8553170	4	159,94,2129,3178,	0,1620,7204,10991,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	32345671	32385765	chr19:32345671-32385765	1	+	32352830	32383083	789624	8	112,94,2129,118,115,12,135,3049,	0,1573,7157,10944,14832,34937,36795,37045,
#Partially deleted in new
chr19	32345718	32383254	chr19:32345718-32383254	1	+	32352830	32383083	789624	7	65,94,2129,118,115,135,538,	0,1526,7110,10897,14785,36748,36998,
#Deleted in new
chr19	32382031	32383248	chr19:32382031-32383248	0	+	32382031	32382031	8553170	2	570,532,	0,685,
#Partially deleted in new
chr19	32390049	32405560	chr19:32390049-32405560	3	-	32390049	32390049	789624	3	284,118,570,	0,9701,14941,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	32405542	32413187	chr19:32405542-32413187	1	+	32408253	32411444	789624	3	367,140,1949,	0,2674,5696,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr19	32405748	32485889	chr19:32405748-32485889	3	+	32408253	32482240	789624	19	161,140,134,91,122,146,124,135,132,102,74,159,123,112,57,83,133,159,3811,	0,2468,5490,26967,30697,31445,33363,34027,47396,49190,52351,52602,57617,58120,58979,62982,71773,74650,76330,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr19	32405879	32485895	chr19:32405879-32485895	1	+	32408253	32482104	789624	20	30,140,134,91,122,146,124,135,132,102,74,159,123,112,57,83,133,159,52,3817,	0,2337,5359,26836,30566,31314,33232,33896,47265,49059,52220,52471,57486,57989,58848,62851,71642,74519,74825,76199,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr19	32406124	32485889	chr19:32406124-32485889	1	+	32408253	32482240	789624	19	178,140,134,91,122,146,124,135,132,102,74,159,123,112,57,83,133,159,3811,	0,2092,5114,26591,30321,31069,32987,33651,47020,48814,51975,52226,57241,57744,58603,62606,71397,74274,75954,
#Partially deleted in new
chr19	32406188	32436495	chr19:32406188-32436495	0	+	32408253	32436495	789624	5	114,140,134,91,50,	0,2028,5050,26527,30257,
#Partially deleted in new
chr19	32438978	32463388	chr19:32438978-32463388	0	+	32438978	32438978	8553170	7	257,135,132,102,74,159,23,	0,797,14166,15960,19121,19372,24387,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	32439216	32483326	chr19:32439216-32483326	0	+	32439216	32467488	789624	15	19,135,132,102,74,159,123,112,57,153,83,133,159,900,1248,	0,559,13928,15722,18883,19134,24149,24652,25511,28257,29514,38305,41182,41824,42862,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	32458097	32485887	chr19:32458097-32485887	0	+	32458097	32458097	8553170	9	76,159,123,112,57,1340,133,159,3809,	0,253,5268,5771,6630,9376,19424,22301,23981,
#Partially deleted in new
chr19	32458403	32480423	chr19:32458403-32480423	0	+	32458403	32477527	789624	6	106,123,112,57,133,25,	0,4962,5465,6324,19118,21995,
#Partially deleted in new
chr19	32458468	32469119	chr19:32458468-32469119	0	+	32458468	32458468	8553170	6	41,123,112,57,83,130,	0,4897,5400,6259,10262,10521,
#Partially deleted in new
chr19	32477482	32482293	chr19:32477482-32482293	0	+	32477482	32477482	8553170	3	172,159,215,	0,2916,4596,
#Partially deleted in new
chr19	32581067	32587427	chr19:32581067-32587427	3	+	32581261	32587300	0	6	260,38,62,92,72,175,	0,1127,3882,4748,5790,6185,
#Partially deleted in new
chr19	32581200	32587387	chr19:32581200-32587387	1	+	32581261	32586039	0	4	127,38,62,1572,	0,994,3749,4615,
#Partially deleted in new
chr19	32581201	32587425	chr19:32581201-32587425	0	+	32581261	32585822	789624	6	126,38,57,92,72,173,	0,993,3753,4614,5656,6051,
#Partially deleted in new
chr19	32581231	32587452	chr19:32581231-32587452	1	+	32581261	32586889	789624	5	96,38,62,72,200,	0,963,3718,5626,6021,
#Partially deleted in new
chr19	32581256	32587297	chr19:32581256-32587297	1	+	32581261	32587271	789624	3	71,38,45,	0,938,5996,
#Partially deleted in new
chr19	32581525	32587414	chr19:32581525-32587414	1	+	32584959	32587300	789624	6	175,38,62,92,72,162,	0,669,3424,4290,5332,5727,
#Deleted in new
chr19	32584868	32587425	chr19:32584868-32587425	0	+	32584868	32584868	8553170	4	143,92,72,173,	0,947,1989,2384,
#Deleted in new
chr19	32586644	32587425	chr19:32586644-32587425	0	+	32586644	32586644	8553170	2	285,173,	0,608,
#Partially deleted in new
chr19	32597006	32675199	chr19:32597006-32675199	3	-	32598144	32659015	0	29	1372,73,79,112,162,120,198,123,45,120,60,198,93,116,83,128,93,133,79,122,77,66,54,60,155,157,111,132,129,	0,2697,2965,5008,7256,8828,10628,18651,20582,22253,22487,25415,28867,29705,31076,31715,34395,42349,43300,45017,46116,46280,46424,46565,47318,49452,52675,61907,78064,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	32598327	32600286	chr19:32598327-32600286	0	-	32598327	32598327	8553170	3	51,73,315,	0,1376,1644,
#Partially deleted in new
chr19	32608336	32608469	chr19:32608336-32608469	3	-	32608336	32608336	5263520	1	133,	0,
#Partially deleted in new
chr19	32626806	32643300	chr19:32626806-32643300	0	-	32626806	32640371	789624	8	21,83,128,93,133,79,77,14,	0,1276,1915,4595,12549,13500,16316,16480,
#Deleted in new
chr19	32636077	32636475	chr19:32636077-32636475	7	+	32636077	32636077	16724991	1	398,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	32637299	32675169	chr19:32637299-32675169	1	-	32639301	32659015	789624	12	2189,79,122,77,66,54,60,155,157,111,132,99,	0,3007,4724,5823,5987,6131,6272,7025,9159,12382,21614,37771,
#Deleted in new
chr19	32643062	32643785	chr19:32643062-32643785	0	-	32643062	32643062	8553170	3	290,54,214,	0,368,509,
#Partially deleted in new
chr19	32643122	32675187	chr19:32643122-32675187	0	-	32643122	32643301	789624	7	77,66,60,155,157,111,117,	0,164,449,1202,3336,6559,31948,
#Partially deleted in new
chr19	32643126	32675192	chr19:32643126-32675192	0	-	32644443	32659015	789624	8	73,66,54,60,155,111,132,122,	0,160,304,445,1198,6555,15787,31944,
#Partially deleted in new
chr19	32644396	32675147	chr19:32644396-32675147	0	-	32644396	32659015	789624	5	80,157,111,132,77,	0,2062,5285,14517,30674,
#Partially deleted in new
chr19	32646603	32676597	chr19:32646603-32676597	0	-	32646603	32659015	789624	4	12,111,132,812,	0,3078,12310,29182,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	32655015	32655308	chr19:32655015-32655308	3	-	32655015	32655015	8553170	1	293,	0,
#Partially deleted in new
chr19	32666297	32673210	chr19:32666297-32673210	3	+	32666297	32666297	8553170	2	129,444,	0,6469,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	32675406	32678300	chr19:32675406-32678300	3	+	32676263	32676971	789624	1	2894,	0,
#Duplicated in new
chr19	32691960	32713796	chr19:32691960-32713796	3	+	32691960	32711957	789624	3	714,208,2045,	0,17224,19791,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	32718297	32719595	chr19:32718297-32719595	3	-	32718297	32718297	8553170	2	268,248,	0,1050,
#Partially deleted in new
chr19	32719752	32821263	chr19:32719752-32821263	1	+	32720072	32821183	789624	28	344,159,137,120,56,86,190,93,98,77,81,61,105,186,157,128,192,129,118,134,221,100,185,211,93,173,69,231,	0,11972,19103,23028,28723,30031,36239,37285,53000,53703,57396,70778,71211,74875,77982,78555,80414,80891,82003,82903,83169,87796,90340,91457,93931,95695,98336,101280,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr19	32720012	32827414	chr19:32720012-32827414	3	+	32720072	32827267	789624	33	84,159,137,120,56,86,190,93,98,77,81,61,105,186,157,128,192,129,118,134,221,115,185,211,93,173,69,107,64,114,154,67,251,	0,11712,18843,22768,28463,29771,35979,37025,52740,53443,57136,70518,70951,74615,77722,78295,80154,80631,81743,82643,82909,87521,90080,91197,93671,95435,98076,101020,106085,106231,106432,106670,107151,
#Partially deleted in new
chr19	32720072	32790808	chr19:32720072-32790808	1	+	32720072	32790679	789624	13	24,159,137,120,56,86,190,93,98,77,81,61,135,	0,11652,18783,22708,28403,29711,35919,36965,52680,53383,57076,70458,70601,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	32810213	32829381	chr19:32810213-32829381	0	+	32810213	32827166	789624	10	64,211,93,173,69,107,64,114,154,2218,	0,996,3470,5234,7875,10819,15884,16030,16231,16950,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	32815562	32829580	chr19:32815562-32829580	0	+	32815562	32826157	789624	7	58,69,151,260,154,67,2417,	0,2526,5426,10535,10882,11120,11601,
#Deleted in new
chr19	32824141	32824505	chr19:32824141-32824505	7	-	32824141	32824141	16724991	1	364,	0,
#Deleted in new
chr19	32826097	32827267	chr19:32826097-32827267	0	+	32826097	32827267	789624	5	64,114,154,67,104,	0,146,347,585,1066,
#Partially deleted in new
chr19	32830508	32869742	chr19:32830508-32869742	1	-	32830619	32868534	789624	13	176,175,150,97,104,124,45,100,126,243,148,198,66,	0,2640,11659,13346,27931,29332,30097,31609,31952,33587,34120,37939,39168,
#Partially deleted in new
chr19	32830514	32869766	chr19:32830514-32869766	3	-	32830619	32868534	789624	13	170,175,150,97,104,124,45,100,126,243,148,198,81,	0,2634,11653,13340,27925,29326,30091,31603,31946,33581,34114,37933,39171,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	32830514	32869736	chr19:32830514-32869736	0	-	32864305	32868534	789624	9	170,175,150,97,104,810,243,198,51,	0,2634,11653,13340,27925,29326,33581,37933,39171,
#Partially deleted in new
chr19	32830587	32868539	chr19:32830587-32868539	0	-	32864305	32868534	789624	8	97,175,150,104,124,45,243,92,	0,2561,11580,27852,29253,30018,33508,37860,
#Partially deleted in new
chr19	32830619	32869764	chr19:32830619-32869764	1	-	32830619	32868534	789624	13	65,175,150,97,104,124,45,100,126,243,148,112,79,	0,2529,11548,13235,27820,29221,29986,31498,31841,33476,34009,37828,39066,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	32831294	32833168	chr19:32831294-32833168	3	+	32831294	32831294	8553170	2	37,398,	0,1476,
#Partially deleted in new
chr19	32858475	32864518	chr19:32858475-32864518	0	-	32858475	32858475	8553170	6	68,124,45,100,126,423,	0,1365,2130,3642,3985,5620,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	32862799	32863092	chr19:32862799-32863092	3	-	32862799	32862799	8553170	1	293,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr19	32875924	32971963	chr19:32875924-32971963	3	-	32879161	32971874	789624	19	3454,170,90,142,168,181,116,104,84,51,143,219,43,29,103,187,159,107,128,	0,5919,11827,23932,25320,39412,42299,47514,50265,51009,55504,57526,61706,63932,72341,77690,83975,90435,95911,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	32875924	32878421	chr19:32875924-32878421	0	-	32875924	32875924	8553170	2	293,204,	0,2293,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr19	32879002	32959952	chr19:32879002-32959952	0	-	32937013	32959952	789624	18	376,170,90,142,168,181,116,104,84,51,143,219,108,43,29,103,187,53,	0,2841,8749,20854,22242,36334,39221,44436,47187,47931,52426,54448,58010,58628,60854,69263,74612,80897,
#Partially deleted in new
chr19	32879008	32971955	chr19:32879008-32971955	0	-	32915510	32971874	789624	18	370,170,90,142,168,181,116,84,51,143,219,43,29,103,187,159,107,120,	0,2835,8743,20848,22236,36328,39215,47181,47925,52420,54442,58622,60848,69257,74606,80891,87351,92827,
#Partially deleted in new
chr19	32931206	32971963	chr19:32931206-32971963	1	-	32931386	32971874	789624	9	365,219,43,29,103,187,159,107,128,	0,2244,6424,8650,17059,22408,28693,35153,40629,
#Partially deleted in new
chr19	32937529	32966419	chr19:32937529-32966419	0	-	32937559	32966419	789624	6	144,29,103,187,159,60,	0,2327,10736,16085,22370,28830,
#Deleted in new
chr19	32963498	32963865	chr19:32963498-32963865	7	+	32963498	32963498	16724991	1	367,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	32966010	32971975	chr19:32966010-32971975	0	-	32966010	32966010	8553170	2	456,140,	0,5825,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	32968908	32971991	chr19:32968908-32971991	1	-	32971451	32971874	789624	2	2747,156,	0,2927,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	32971172	32971916	chr19:32971172-32971916	0	-	32971172	32971172	8553170	2	477,81,	0,663,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	32972208	32976816	chr19:32972208-32976816	0	+	32973196	32974084	789624	5	138,119,79,153,386,	0,975,1275,1851,4222,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	32972220	32976850	chr19:32972220-32976850	1	+	32974101	32976682	789624	4	126,137,153,420,	0,1205,1839,4210,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	32972249	32978222	chr19:32972249-32978222	3	+	32973196	32976682	0	5	97,119,137,153,1792,	0,934,1176,1810,4181,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	32972259	32976974	chr19:32972259-32976974	1	+	32974101	32976682	789624	3	87,153,544,	0,1800,4171,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	32972303	32976812	chr19:32972303-32976812	1	+	32973196	32976682	0	5	74,119,137,153,382,	0,880,1122,1756,4127,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	32976985	32977933	chr19:32976985-32977933	0	+	32976985	32976985	8553170	2	331,437,	0,511,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	32978592	33064888	chr19:32978592-33064888	3	-	32979995	33064852	0	15	1664,156,147,77,195,120,157,188,167,125,78,76,129,116,105,	0,11921,13230,15384,17433,20993,23654,24220,29421,33086,34054,42978,47911,65656,86191,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	32978592	33027271	chr19:32978592-33027271	0	-	32978592	32978592	8553170	12	1664,156,147,77,195,120,157,188,167,78,76,768,	0,11921,13230,15384,17433,20993,23654,24220,29421,34054,42978,47911,
#Partially deleted in new
chr19	32979638	33064888	chr19:32979638-33064888	0	-	33012651	33064852	789624	14	618,156,147,77,195,120,157,188,167,125,78,129,116,105,	0,10875,12184,14338,16387,19947,22608,23174,28375,32040,33008,46865,64610,85145,
#Partially deleted in new
chr19	32979953	32990772	chr19:32979953-32990772	0	-	32979953	32979953	8553170	2	303,259,	0,10560,
#Partially deleted in new
chr19	32990452	32992145	chr19:32990452-32992145	0	-	32990452	32990452	8553170	2	217,323,	0,1370,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	32994021	32996461	chr19:32994021-32996461	0	-	32994021	32994021	8553170	2	32,436,	0,2004,
#Partially deleted in new
chr19	33051514	33051701	chr19:33051514-33051701	7	+	33051514	33051514	16724991	1	187,	0,
#Deleted in new
chr19	33067174	33067433	chr19:33067174-33067433	7	+	33067174	33067174	16724991	1	259,	0,
#Partially deleted in new
chr19	33080879	33130542	chr19:33080879-33130542	3	+	33081193	33130160	789624	20	387,135,86,161,98,59,240,148,80,205,300,179,128,137,167,217,108,98,146,413,	0,7254,9900,12479,13292,14882,15327,16875,20615,25815,28837,30844,31606,32887,33373,36945,38130,44225,45708,49250,
#Partially deleted in new
chr19	33080898	33109877	chr19:33080898-33109877	0	+	33081193	33096240	789624	10	368,135,86,59,240,148,102,80,205,161,	0,7235,9881,14863,15308,16856,19274,20596,25796,28818,
#Partially deleted in new
chr19	33109876	33112679	chr19:33109876-33112679	0	+	33109876	33109876	8553170	3	140,179,194,	0,1847,2609,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	33112938	33130406	chr19:33112938-33130406	0	+	33112938	33112938	8553170	7	965,167,217,108,98,146,277,	0,1314,4886,6071,12166,13649,17191,
#Partially deleted in new
chr19	33132091	33175795	chr19:33132091-33175795	1	+	33132169	33174220	789624	12	354,111,89,64,139,130,188,83,69,93,115,400,	0,5585,12752,15553,16680,19089,24263,28322,32105,40256,42090,43304,
#Partially deleted in new
chr19	33132093	33175795	chr19:33132093-33175795	3	+	33132169	33175572	789624	11	352,111,89,64,139,130,188,83,69,93,400,	0,5583,12750,15551,16678,19087,24261,28320,32103,40254,43302,
#Partially deleted in new
chr19	33177602	33205291	chr19:33177602-33205291	0	+	33202972	33205291	789624	5	127,48,139,215,46,	0,19127,25245,27035,27643,
#Partially deleted in new
chr19	33194583	33208867	chr19:33194583-33208867	3	+	33194785	33207575	789624	7	275,48,139,215,1117,133,1880,	0,2146,8264,10054,10662,12017,12404,
#Partially deleted in new
chr19	33196735	33205534	chr19:33196735-33205534	0	+	33196735	33196735	8553170	3	42,139,897,	0,6112,7902,
#Deleted in new
chr19	33203869	33207639	chr19:33203869-33207639	0	+	33203869	33203869	8553170	3	2493,133,652,	0,2731,3118,
#Deleted in new
chr19	33207128	33207639	chr19:33207128-33207639	3	+	33207128	33207128	8553170	1	511,	0,
#Partially deleted in new
chr19	33208663	33225850	chr19:33208663-33225850	3	-	33208890	33225703	789624	11	358,178,150,97,104,124,154,126,152,205,298,	0,644,1803,2138,2561,2750,3628,3850,4187,7105,16889,
#Partially deleted in new
chr19	33208775	33211689	chr19:33208775-33211689	0	-	33208775	33208775	8553170	4	246,178,150,888,	0,532,1691,2026,
#Partially deleted in new
chr19	33208819	33225798	chr19:33208819-33225798	0	-	33209481	33225703	789624	10	202,178,150,104,124,154,126,152,205,246,	0,488,1647,2405,2594,3472,3694,4031,6949,16733,
#Partially deleted in new
chr19	33211426	33225798	chr19:33211426-33225798	0	-	33212937	33225703	789624	5	111,154,126,152,246,	0,865,1087,1424,14126,
#Partially deleted in new
chr19	33211538	33225798	chr19:33211538-33225798	0	-	33212937	33225703	789624	4	907,126,152,246,	0,975,1312,14014,
#Partially deleted in new
chr19	33217816	33221170	chr19:33217816-33221170	3	+	33217816	33217816	8553170	4	77,212,110,301,	0,2068,2436,3053,
#Partially deleted in new
chr19	33299933	33302564	chr19:33299933-33302564	3	-	33301337	33302414	789624	1	2631,	0,
#Partially deleted in new
chr19	33299933	33301168	chr19:33299933-33301168	3	+	33299933	33299933	8553170	2	541,118,	0,1117,
#Partially deleted in new
chr19	33301278	33301940	chr19:33301278-33301940	3	+	33301278	33301278	8553170	2	356,126,	0,536,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	33302856	33305054	chr19:33302856-33305054	3	+	33302856	33302856	789624	1	2198,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	33305035	33309387	chr19:33305035-33309387	3	+	33305035	33305035	8553170	2	296,108,	0,4244,
#Partially deleted in new
chr19	33340685	33341984	chr19:33340685-33341984	7	+	33340685	33340685	16724991	2	78,725,	0,574,
#Deleted in new
chr19	33360496	33361448	chr19:33360496-33361448	7	-	33360496	33360496	16724991	1	952,	0,
#Partially deleted in new
chr19	33373329	33382686	chr19:33373329-33382686	3	+	33379239	33379692	789624	2	566,3543,	0,5814,
#Partially deleted in new
chr19	33374311	33382686	chr19:33374311-33382686	1	+	33379239	33379692	789624	2	302,3543,	0,4832,
#Partially deleted in new
chr19	33386949	33521794	chr19:33386949-33521794	3	-	33387343	33521760	0	15	532,192,185,149,78,69,47,76,45,62,48,64,128,184,51,	0,940,4345,14771,24722,26625,76045,77037,91096,103046,106340,113988,124078,125643,134794,
#Deleted in new
chr19	33386949	33389120	chr19:33386949-33389120	0	-	33386949	33386949	8553170	2	532,1231,	0,940,
#Deleted in new
chr19	33386954	33387723	chr19:33386954-33387723	0	-	33386954	33386954	8553170	2	527,69,	0,700,
#Deleted in new
chr19	33386954	33395148	chr19:33386954-33395148	0	-	33386954	33386954	8553170	4	527,192,185,39,	0,935,4340,8155,
#Partially deleted in new
chr19	33386979	33521791	chr19:33386979-33521791	1	-	33387343	33521760	0	13	502,192,185,149,78,69,45,62,48,64,128,184,48,	0,910,4315,14741,24692,26595,91066,103016,106310,113958,124048,125613,134764,
#Partially deleted in new
chr19	33387023	33521788	chr19:33387023-33521788	1	-	33387343	33521760	0	13	458,192,185,149,78,69,47,76,45,62,48,184,45,	0,866,4271,14697,24648,26551,75971,76963,91022,102972,106266,125569,134720,
#Partially deleted in new
chr19	33391422	33478084	chr19:33391422-33478084	0	-	33391422	33478084	789624	8	57,66,149,78,69,47,76,39,	0,4667,10298,20249,22152,71572,72564,86623,
#Partially deleted in new
chr19	33401805	33487080	chr19:33401805-33487080	0	-	33401805	33401805	8553170	7	64,78,69,47,76,45,178,	0,9866,11769,61189,62181,76240,85097,
#Partially deleted in new
chr19	33401807	33511521	chr19:33401807-33511521	0	-	33401807	33401807	8553170	10	62,78,69,47,76,45,62,48,64,494,	0,9864,11767,61187,62179,76238,88188,91482,99130,109220,
#Partially deleted in new
chr19	33401807	33493420	chr19:33401807-33493420	0	-	33401807	33464043	789624	8	62,78,69,47,76,45,62,131,	0,9864,11767,61187,62179,76238,88188,91482,
#Partially deleted in new
chr19	33401838	33487387	chr19:33401838-33487387	0	-	33401838	33401838	8553170	7	31,78,69,47,76,45,138,	0,9833,11736,61156,62148,76207,85411,
#Partially deleted in new
chr19	33462945	33493337	chr19:33462945-33493337	0	-	33477286	33493337	789624	6	96,76,220,45,62,48,	0,1041,14134,15100,27050,30344,
#Partially deleted in new
chr19	33462950	33511138	chr19:33462950-33511138	0	-	33493321	33511138	789624	6	91,76,45,62,48,111,	0,1036,15095,27045,30339,48077,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	33555567	33557470	chr19:33555567-33557470	3	+	33555567	33555567	8553170	2	604,785,	0,1118,
#Partially deleted in new
chr19	33589205	33589688	chr19:33589205-33589688	7	-	33589205	33589205	16724991	1	483,	0,
#Partially deleted in new
chr19	33621954	33773508	chr19:33621954-33773508	3	+	33689261	33773063	789624	5	342,77,216,38,1552,	0,45812,67221,149458,150002,
#Partially deleted in new
chr19	33621954	33772323	chr19:33621954-33772323	0	+	33689261	33772323	789624	5	342,77,216,38,367,	0,45812,67221,149458,150002,
#Partially deleted in new
chr19	33621970	33773509	chr19:33621970-33773509	1	+	33689261	33773063	789624	4	326,216,38,1553,	0,67205,149442,149986,
#Partially deleted in new
chr19	33621983	33744484	chr19:33621983-33744484	0	+	33621983	33621983	8553170	3	313,216,154,	0,67192,122347,
#Partially deleted in new
chr19	33684527	33773509	chr19:33684527-33773509	1	+	33689261	33773063	789624	4	672,216,38,1553,	0,4648,86885,87429,
#Partially deleted in new
chr19	33795932	33806958	chr19:33795932-33806958	0	+	33800454	33806958	789624	5	171,96,93,176,96,	0,2738,4495,5234,10930,
#Partially deleted in new
chr19	33796415	33807006	chr19:33796415-33807006	0	+	33800454	33807006	789624	5	110,99,93,176,144,	0,2252,4012,4751,10447,
#Partially deleted in new
chr19	33796453	33806868	chr19:33796453-33806868	0	+	33800454	33806868	789624	6	72,99,125,93,176,6,	0,2214,3140,3974,4713,10409,
#Deleted in new
chr19	33796845	33801285	chr19:33796845-33801285	0	+	33800454	33801285	789624	5	142,127,96,93,119,	0,1418,1825,3582,4321,
#Partially deleted in new
chr19	33796861	33815763	chr19:33796861-33815763	1	+	33800454	33811802	789624	7	126,99,93,176,145,306,3973,	0,1806,3566,4305,10001,14385,14929,
#Partially deleted in new
chr19	33796861	33813472	chr19:33796861-33813472	3	+	33800454	33812948	789624	7	126,96,93,176,145,306,683,	0,1809,3566,4305,10001,14385,15928,
#Partially deleted in new
chr19	33796901	33812970	chr19:33796901-33812970	1	+	33800454	33812948	789624	8	86,99,125,93,176,145,306,181,	0,1766,2692,3526,4265,9961,14345,15888,
#Deleted in new
chr19	33798336	33801332	chr19:33798336-33801332	0	+	33800454	33801332	789624	5	54,96,125,93,166,	0,334,1257,2091,2830,
#Partially deleted in new
chr19	33798385	33814243	chr19:33798385-33814243	1	+	33800454	33812948	789624	6	381,93,176,145,306,1454,	0,2042,2781,8477,12861,14404,
#Deleted in new
chr19	33798698	33801748	chr19:33798698-33801748	0	+	33798698	33798698	8553170	3	68,93,582,	0,1729,2468,
#Partially deleted in new
chr19	33806923	33811828	chr19:33806923-33811828	0	+	33806923	33811654	789624	2	84,582,	0,4323,
#Deleted in new
chr19	33813810	33814176	chr19:33813810-33814176	0	+	33813810	33813810	8553170	2	115,167,	0,199,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	33906351	33908391	chr19:33906351-33908391	3	+	33906351	33906351	8553170	1	2040,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	33927363	33927625	chr19:33927363-33927625	3	-	33927363	33927363	8553170	1	262,	0,
#Partially deleted in new
chr19	34021658	34021895	chr19:34021658-34021895	7	+	34021658	34021658	16724991	1	237,	0,
#Partially deleted in new
chr19	34022655	34023427	chr19:34022655-34023427	7	-	34022655	34022655	16724991	1	772,	0,
#Deleted in new
chr19	34092560	34093310	chr19:34092560-34093310	7	-	34092560	34092560	16724991	1	750,	0,
#Deleted in new
chr19	34126972	34127423	chr19:34126972-34127423	7	+	34126972	34126972	16724991	1	451,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	34172503	34196666	chr19:34172503-34196666	0	+	34172642	34195242	789624	4	260,164,102,33,	0,21974,22715,24130,
#Partially deleted in new
chr19	34172524	34228096	chr19:34172524-34228096	1	+	34172642	34226431	0	10	239,164,130,177,66,183,172,232,57,732,	0,21953,24109,42599,43071,46866,47181,48982,53883,54840,
#Partially deleted in new
chr19	34172565	34229515	chr19:34172565-34229515	3	+	34172642	34227388	0	10	198,164,130,123,177,66,183,172,232,2151,	0,21912,24068,36363,42558,43030,46825,47140,48941,54799,
#Partially deleted in new
chr19	34172567	34229288	chr19:34172567-34229288	1	+	34172642	34226431	0	11	196,164,130,123,177,66,183,172,232,57,1924,	0,21910,24066,36361,42556,43028,46823,47138,48939,53840,54797,
#Partially deleted in new
chr19	34172657	34219877	chr19:34172657-34219877	0	+	34172657	34219877	789624	7	106,164,130,123,66,183,172,	0,21820,23976,36271,42938,46733,47048,
#Partially deleted in new
chr19	34208195	34229279	chr19:34208195-34229279	0	+	34208195	34208195	8553170	7	856,177,66,183,172,232,1915,	0,6928,7400,11195,11510,13311,19169,
#Partially deleted in new
chr19	34219705	34221779	chr19:34219705-34221779	0	+	34219705	34221779	789624	2	172,273,	0,1801,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	34221349	34227617	chr19:34221349-34227617	0	+	34221349	34221349	8553170	3	389,57,253,	0,5058,6015,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	34254536	34355586	chr19:34254536-34355586	3	+	34300473	34352955	789624	14	78,1290,210,141,96,162,159,98,126,1034,166,138,79,2940,	0,45142,65370,72884,73234,73453,75652,79167,85330,86885,93340,94479,96977,98110,
#Partially deleted in new
chr19	34254551	34320016	chr19:34254551-34320016	0	+	34300845	34320016	789624	4	63,245,214,110,	0,45127,46203,65355,
#Partially deleted in new
chr19	34254580	34300567	chr19:34254580-34300567	0	+	34300473	34300567	789624	3	34,245,303,	0,45098,45684,
#Partially deleted in new
chr19	34254596	34352831	chr19:34254596-34352831	0	+	34254596	34254596	8553170	5	18,245,34,79,185,	0,45082,94523,96917,98050,
#Partially deleted in new
chr19	34265557	34300470	chr19:34265557-34300470	0	+	34265557	34265557	8553170	2	64,792,	0,34121,
#Partially deleted in new
chr19	34265567	34300084	chr19:34265567-34300084	0	+	34265567	34265567	8553170	3	54,124,406,	0,19582,34111,
#Deleted in new
chr19	34296276	34296592	chr19:34296276-34296592	7	-	34296276	34296276	16724991	1	316,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	34348355	34359412	chr19:34348355-34359412	3	-	34348355	34348355	8553170	3	65,432,88,	0,10129,10969,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	34348461	34353188	chr19:34348461-34353188	0	+	34348461	34348461	8553170	3	692,79,542,	0,3052,4185,
#Partially deleted in new
chr19	34359479	34366802	chr19:34359479-34366802	0	+	34364909	34366802	789624	5	127,210,129,91,20,	0,5330,5780,6865,7303,
#Partially deleted in new
chr19	34359586	34368602	chr19:34359586-34368602	0	+	34364909	34368602	789624	6	310,210,129,91,69,20,	0,5223,5673,6758,7196,8996,
#Partially deleted in new
chr19	34359733	34368621	chr19:34359733-34368621	0	+	34364909	34368621	789624	6	77,210,129,91,69,39,	0,5076,5526,6611,7049,8849,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	34363317	34368620	chr19:34363317-34368620	0	+	34364909	34368620	789624	6	66,210,129,91,69,38,	0,1492,1942,3027,3465,5265,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr19	34364739	34402413	chr19:34364739-34402413	1	+	34364909	34400036	789624	19	280,129,91,69,120,84,147,72,45,54,61,44,153,130,77,129,76,67,2513,	0,520,1605,2043,3843,12763,12995,14194,14778,16726,28508,28988,29174,31561,31841,34467,34816,34979,35161,
#Partially deleted in new
chr19	34364792	34400245	chr19:34364792-34400245	1	+	34364909	34400036	0	18	227,129,91,69,120,147,72,45,54,61,44,153,130,77,129,76,67,345,	0,467,1552,1990,3790,12942,14141,14725,16673,28455,28935,29121,31508,31788,34414,34763,34926,35108,
#Partially deleted in new
chr19	34364991	34377820	chr19:34364991-34377820	0	+	34364991	34365023	789624	7	99,129,91,69,120,84,86,	0,268,1353,1791,3591,12511,12743,
#Partially deleted in new
chr19	34364998	34368808	chr19:34364998-34368808	0	+	34364998	34364998	8553170	5	21,129,91,69,226,	0,261,1346,1784,3584,
#Partially deleted in new
chr19	34365021	34377578	chr19:34365021-34377578	0	+	34365266	34377578	789624	6	44,129,91,69,120,76,	0,238,1323,1761,3561,12481,
#Deleted in new
chr19	34365025	34366807	chr19:34365025-34366807	0	+	34365025	34365025	8553170	3	363,91,25,	0,1319,1757,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr19	34365126	34402413	chr19:34365126-34402413	3	+	34365266	34400036	0	18	262,91,69,120,84,147,72,45,54,61,44,153,130,77,129,76,67,2513,	0,1218,1656,3456,12376,12608,13807,14391,16339,28121,28601,28787,31174,31454,34080,34429,34592,34774,
#Partially deleted in new
chr19	34365195	34400328	chr19:34365195-34400328	1	+	34365266	34400036	0	18	193,91,69,120,84,147,72,45,54,61,44,153,130,77,129,76,67,428,	0,1149,1587,3387,12307,12539,13738,14322,16270,28052,28532,28718,31105,31385,34011,34360,34523,34705,
#Partially deleted in new
chr19	34365195	34379554	chr19:34365195-34379554	0	+	34365266	34379554	789624	6	193,91,69,120,72,37,	0,1149,1587,3387,13738,14322,
#Partially deleted in new
chr19	34365195	34377832	chr19:34365195-34377832	0	+	34365266	34377832	789624	5	193,91,69,120,98,	0,1149,1587,3387,12539,
#Partially deleted in new
chr19	34365195	34377856	chr19:34365195-34377856	0	+	34365266	34377856	789624	5	193,91,69,84,122,	0,1149,1587,12307,12539,
#Partially deleted in new
chr19	34365221	34400332	chr19:34365221-34400332	0	+	34365266	34393734	789624	17	167,91,69,120,84,147,72,45,133,61,44,153,130,129,76,67,432,	0,1123,1561,3361,12281,12513,13712,14296,16244,28026,28506,28692,31079,33985,34334,34497,34679,
#Partially deleted in new
chr19	34365378	34400267	chr19:34365378-34400267	0	+	34365378	34400036	789624	16	10,91,69,120,84,147,72,45,54,61,44,153,130,77,50,367,	0,966,1404,3204,12124,12356,13555,14139,16087,27869,28349,28535,30922,31202,34357,34522,
#Partially deleted in new
chr19	34365561	34400328	chr19:34365561-34400328	0	+	34365561	34365561	8553170	19	632,91,69,120,84,147,72,45,535,54,61,44,153,130,77,129,76,67,428,	0,783,1221,3021,11941,12173,13372,13956,15261,15904,27686,28166,28352,30739,31019,33645,33994,34157,34339,
#Deleted in new
chr19	34378977	34379867	chr19:34378977-34379867	0	+	34378977	34378977	8553170	2	28,350,	0,540,
#Partially deleted in new
chr19	34392195	34396656	chr19:34392195-34396656	0	+	34392195	34392195	8553170	5	1113,44,153,130,76,	0,1532,1718,4105,4385,
#Partially deleted in new
chr19	34393266	34400327	chr19:34393266-34400327	0	+	34393266	34393266	8553170	7	800,130,77,129,76,67,427,	0,3034,3314,5940,6289,6452,6634,
#Partially deleted in new
chr19	34396314	34409364	chr19:34396314-34409364	2	+	34396314	34409364	789624	5	116,77,167,61,204,	0,266,8334,8615,12846,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	34397282	34400335	chr19:34397282-34400335	0	+	34397282	34397282	8553170	1	3053,	0,
#Partially deleted in new
chr19	34400346	34409236	chr19:34400346-34409236	1	+	34400602	34409236	789624	4	349,167,61,76,	0,4302,4583,8814,
#Partially deleted in new
chr19	34404383	34426167	chr19:34404383-34426167	3	+	34404430	34426120	789624	7	155,167,61,350,111,149,178,	0,265,546,4777,9353,17135,21606,
#Partially deleted in new
chr19	34404424	34426150	chr19:34404424-34426150	0	+	34404424	34404424	8553170	6	114,342,350,111,149,161,	0,224,4736,9312,17094,21565,
#Partially deleted in new
chr19	34404826	34426168	chr19:34404826-34426168	1	+	34421627	34426120	789624	3	164,149,179,	0,16692,21163,
#Partially deleted in new
chr19	34409099	34421590	chr19:34409099-34421590	0	+	34409099	34409099	8553170	3	411,111,72,	0,4637,12419,
#Partially deleted in new
chr19	34421434	34426167	chr19:34421434-34426167	0	+	34421434	34421434	8553170	2	233,178,	0,4555,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	34421987	34422311	chr19:34421987-34422311	3	-	34421987	34421987	8553170	1	324,	0,
#Partially deleted in new
chr19	34426111	34428273	chr19:34426111-34428273	3	-	34426111	34426111	8553170	2	290,152,	0,2010,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	34428351	34438764	chr19:34428351-34438764	0	+	34428432	34430119	789624	7	219,94,84,71,65,101,120,	0,1741,2224,3509,4996,6516,10293,
#Partially deleted in new
chr19	34428358	34464131	chr19:34428358-34464131	0	+	34428432	34434954	789624	12	212,101,122,68,122,100,167,94,113,156,97,106,	0,6509,10286,15485,16641,21906,23622,25901,26085,30410,32111,35667,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr19	34428362	34471251	chr19:34428362-34471251	3	+	34428432	34469221	0	17	208,84,71,65,101,122,68,122,100,167,94,113,156,97,106,137,2212,	0,2213,3498,4985,6505,10282,15481,16637,21902,23618,25897,26081,30406,32107,35663,38515,40677,
#Partially deleted in new
chr19	34428372	34450364	chr19:34428372-34450364	0	+	34428432	34450364	789624	8	198,71,65,101,122,68,122,100,	0,3488,4975,6495,10272,15471,16627,21892,
#Partially deleted in new
chr19	34428483	34432033	chr19:34428483-34432033	0	+	34428483	34428483	8553170	3	87,84,173,	0,2092,3377,
#Partially deleted in new
chr19	34428875	34469890	chr19:34428875-34469890	1	+	34431926	34469221	0	17	348,84,71,65,101,122,68,122,100,167,94,113,156,97,106,137,851,	0,1700,2985,4472,5992,9769,14968,16124,21389,23105,25384,25568,29893,31594,35150,38002,40164,
#Partially deleted in new
chr19	34433259	34438743	chr19:34433259-34438743	0	+	34433259	34433259	8553170	3	153,101,99,	0,1608,5385,
#Partially deleted in new
chr19	34450283	34464119	chr19:34450283-34464119	0	+	34450283	34464119	789624	6	81,167,94,113,97,94,	0,1697,3976,4160,10186,13742,
#Partially deleted in new
chr19	34458713	34469398	chr19:34458713-34469398	1	+	34460490	34469221	789624	5	211,97,106,137,359,	0,1756,5312,8164,10326,
#Partially deleted in new
chr19	34467024	34469116	chr19:34467024-34469116	0	+	34467024	34467024	8553170	2	94,77,	0,2015,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	34481637	34512304	chr19:34481637-34512304	3	+	34481974	34500269	789624	8	1004,102,68,63,131,52,69,12176,	0,8738,11399,11625,11854,12948,14065,18491,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	34482527	34498629	chr19:34482527-34498629	0	+	34482527	34498564	789624	8	114,102,68,63,131,52,69,68,	0,7848,10509,10735,10964,12058,13175,16034,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	34533426	34534084	chr19:34533426-34534084	7	-	34533426	34533426	16724991	2	241,115,	0,543,
#Deleted in new
chr19	34542461	34545395	chr19:34542461-34545395	7	-	34542461	34542461	16724991	3	1478,99,130,	0,2452,2804,
#Deleted in new
chr19	34576732	34577701	chr19:34576732-34577701	3	-	34576732	34576732	789624	3	262,191,159,	0,533,810,
#Deleted in new
chr19	34576732	34577460	chr19:34576732-34577460	0	-	34576732	34576732	8553170	2	208,195,	0,533,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	34593328	34632976	chr19:34593328-34632976	0	-	34593328	34593328	8553170	4	271,69,44,259,	0,15358,38679,39389,
#Deleted in new
chr19	34593441	34594585	chr19:34593441-34594585	1	-	34593554	34594563	789624	3	158,185,83,	0,733,1061,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	34593441	34675699	chr19:34593441-34675699	3	-	34593554	34594563	789624	4	158,185,2092,70,	0,733,1061,82188,
#Deleted in new
chr19	34634843	34635717	chr19:34634843-34635717	7	+	34634843	34634843	16724991	1	874,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	34637695	34637781	chr19:34637695-34637781	3	-	34637695	34637695	8553170	1	86,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	34638121	34640689	chr19:34638121-34640689	3	-	34638121	34638121	8553170	2	133,280,	0,2288,
#Deleted in new
chr19	34645379	34646838	chr19:34645379-34646838	3	+	34645379	34645379	8553170	1	1459,	0,
#Deleted in new
chr19	34645661	34646070	chr19:34645661-34646070	7	+	34645661	34645661	16724991	1	409,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	34675716	34677581	chr19:34675716-34677581	3	-	34675716	34675716	8553170	1	1865,	0,
#Partially deleted in new
chr19	34677638	34683049	chr19:34677638-34683049	0	+	34677638	34677638	8553170	3	218,77,273,	0,1098,5138,
#Partially deleted in new
chr19	34677638	34686394	chr19:34677638-34686394	1	+	34678804	34685237	789624	5	465,77,121,87,2143,	0,1098,5138,5513,6613,
#Partially deleted in new
chr19	34677638	34685237	chr19:34677638-34685237	1	+	34678804	34685237	789624	7	218,77,121,87,178,112,930,	0,1098,5138,5513,6353,6553,6669,
#Partially deleted in new
chr19	34677646	34684137	chr19:34677646-34684137	0	+	34678804	34684137	789624	5	150,77,121,84,146,	0,1090,5130,5508,6345,
#Partially deleted in new
chr19	34677646	34684541	chr19:34677646-34684541	1	+	34678804	34684329	789624	3	210,77,290,	0,1090,6605,
#Partially deleted in new
chr19	34677653	34684172	chr19:34677653-34684172	0	+	34678804	34684172	789624	5	209,77,121,87,181,	0,1083,5123,5498,6338,
#Partially deleted in new
chr19	34677661	34686397	chr19:34677661-34686397	3	+	34678804	34685237	789624	5	172,77,121,84,2146,	0,1075,5115,5493,6590,
#Partially deleted in new
chr19	34677677	34684464	chr19:34677677-34684464	0	+	34678804	34684464	789624	5	77,77,121,84,213,	0,1059,5099,5477,6574,
#Partially deleted in new
chr19	34677677	34686392	chr19:34677677-34686392	1	+	34678804	34685237	789624	5	426,77,121,84,2141,	0,1059,5099,5477,6574,
#Partially deleted in new
chr19	34677688	34686391	chr19:34677688-34686391	1	+	34678804	34685237	789624	5	168,77,121,84,2140,	0,1048,5088,5466,6563,
#Partially deleted in new
chr19	34677701	34684405	chr19:34677701-34684405	1	+	34678804	34684173	789624	5	155,77,121,87,414,	0,1035,5075,5450,6290,
#Partially deleted in new
chr19	34677706	34683147	chr19:34677706-34683147	0	+	34677706	34677706	8553170	3	90,77,371,	0,1030,5070,
#Partially deleted in new
chr19	34677716	34686332	chr19:34677716-34686332	1	+	34678804	34685237	789624	6	140,77,132,121,84,2081,	0,1020,2111,5060,5438,6535,
#Partially deleted in new
chr19	34677835	34686396	chr19:34677835-34686396	1	+	34678804	34684173	789624	5	268,77,121,84,2405,	0,901,4941,5319,6156,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	34681282	34686391	chr19:34681282-34686391	0	+	34681282	34681282	8553170	3	1615,84,2140,	0,1872,2969,
#Deleted in new
chr19	34733297	34733837	chr19:34733297-34733837	3	-	34733297	34733297	8553170	1	540,	0,
#Partially deleted in new
chr19	34734154	34739620	chr19:34734154-34739620	0	+	34735037	34739620	789624	4	206,77,121,95,	0,815,4993,5371,
#Partially deleted in new
chr19	34734155	34742872	chr19:34734155-34742872	1	+	34735037	34742097	789624	6	100,77,132,121,99,2262,	0,814,1919,4992,5367,6455,
#Partially deleted in new
chr19	34734193	34742872	chr19:34734193-34742872	0	+	34734193	34734193	8553170	3	853,474,2262,	0,4954,6417,
#Partially deleted in new
chr19	34734245	34740818	chr19:34734245-34740818	0	+	34735037	34740818	789624	5	65,77,121,96,208,	0,724,4902,5280,6365,
#Partially deleted in new
chr19	34734262	34740725	chr19:34734262-34740725	0	+	34735037	34740725	789624	5	98,77,121,87,115,	0,707,4885,5260,6348,
#Partially deleted in new
chr19	34734574	34742186	chr19:34734574-34742186	1	+	34735037	34742097	789624	4	472,121,96,1576,	0,4573,4951,6036,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	34734948	34745378	chr19:34734948-34745378	3	+	34735037	34742097	789624	4	98,121,99,4768,	0,4199,4574,5662,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	34758075	34773215	chr19:34758075-34773215	3	-	34759033	34772841	789624	4	2484,96,127,392,	0,9240,11353,14748,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	34762794	34773229	chr19:34762794-34773229	1	-	34765594	34772841	789624	4	2847,96,127,406,	0,4521,6634,10029,
#Partially deleted in new
chr19	34766967	34773200	chr19:34766967-34773200	1	-	34767307	34772841	789624	3	444,127,377,	0,2461,5856,
#Partially deleted in new
chr19	34767022	34773205	chr19:34767022-34773205	0	-	34767022	34767022	8553170	3	389,127,870,	0,2406,5313,
#Deleted in new
chr19	34779411	34780021	chr19:34779411-34780021	7	-	34779411	34779411	16724991	1	610,	0,
#Partially deleted in new
chr19	34788581	34816900	chr19:34788581-34816900	0	-	34788581	34788581	8553170	4	93,96,211,339,	0,3238,27667,27980,
#Deleted in new
chr19	34811588	34814345	chr19:34811588-34814345	3	-	34811588	34811588	8553170	1	2757,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	34816156	34832869	chr19:34816156-34832869	3	-	34816156	34816156	789624	6	1334,180,90,121,207,145,	0,2430,13007,14249,16173,16568,
#Deleted in new
chr19	34825413	34825996	chr19:34825413-34825996	7	+	34825413	34825413	16724991	1	583,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	34837888	34841681	chr19:34837888-34841681	1	+	34837888	34837888	8553170	6	107,124,77,127,623,656,	0,289,519,773,1710,3137,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	34839181	34855304	chr19:34839181-34855304	3	+	34839181	34839181	8553170	5	211,188,123,167,4613,	0,417,2544,9784,11510,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	34849277	34860290	chr19:34849277-34860290	3	-	34849277	34849277	8553170	3	272,126,117,	0,1391,10896,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	34850627	34860576	chr19:34850627-34860576	1	-	34850627	34850627	8553170	2	167,403,	0,9546,
#Deleted in new
chr19	34866351	34866919	chr19:34866351-34866919	7	+	34866351	34866351	16724991	1	568,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	34892028	34898943	chr19:34892028-34898943	3	-	34892028	34892028	789624	3	268,113,90,	0,1315,6825,
#Partially deleted in new
chr19	34902201	34904195	chr19:34902201-34904195	3	-	34902201	34902201	8553170	3	278,119,45,	0,763,1949,
#Deleted in new
chr19	34904391	34905057	chr19:34904391-34905057	3	-	34904391	34904391	8553170	2	361,97,	0,569,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	34905314	34908188	chr19:34905314-34908188	3	+	34905314	34905314	789624	2	910,747,	0,2127,
#Partially deleted in new
chr19	34923298	34926812	chr19:34923298-34926812	3	-	34923298	34923298	8553170	2	541,84,	0,3430,
#Partially deleted in new
chr19	34926902	34945164	chr19:34926902-34945164	1	+	34929947	34944838	789624	5	314,73,151,99,1942,	0,2981,4940,6722,16320,
#Partially deleted in new
chr19	34926902	34945170	chr19:34926902-34945170	3	+	34929947	34944838	789624	5	380,73,151,99,1948,	0,2981,4940,6722,16320,
#Partially deleted in new
chr19	34926909	34933723	chr19:34926909-34933723	0	+	34929947	34933723	789624	4	373,73,151,99,	0,2974,4933,6715,
#Partially deleted in new
chr19	34926979	34945168	chr19:34926979-34945168	1	+	34929947	34942598	789624	6	237,73,151,96,80,1946,	0,2904,4863,6648,15614,16243,
#Partially deleted in new
chr19	34927043	34945009	chr19:34927043-34945009	1	+	34929947	34944838	789624	5	173,73,151,96,1787,	0,2840,4799,6584,16179,
#Partially deleted in new
chr19	34933610	34943426	chr19:34933610-34943426	0	+	34933610	34933610	8553170	2	113,204,	0,9612,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	34949037	34951205	chr19:34949037-34951205	3	-	34949037	34949037	8553170	1	2168,	0,
#Partially deleted in new
chr19	34956353	34964049	chr19:34956353-34964049	3	-	34957955	34963662	789624	4	3218,123,127,420,	0,3881,4514,7276,
#Deleted in new
chr19	34957473	34960703	chr19:34957473-34960703	1	-	34957955	34960316	789624	2	2098,469,	0,2761,
#Partially deleted in new
chr19	34994783	35026471	chr19:34994783-35026471	1	+	34996022	35026141	789624	20	42,298,211,21,85,104,96,81,113,151,199,144,119,143,104,174,88,108,121,423,	0,1210,14335,14639,15104,15308,15500,16690,18472,18757,19405,21040,24407,24607,26718,26907,27167,28452,28643,31265,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	34998232	35000170	chr19:34998232-35000170	3	-	34998232	34998232	8553170	3	369,101,95,	0,1164,1843,
#Partially deleted in new
chr19	34999386	35010379	chr19:34999386-35010379	0	+	34999386	34999386	8553170	6	50,211,21,85,104,96,	0,9732,10036,10501,10705,10897,
#Partially deleted in new
chr19	35000286	35026469	chr19:35000286-35026469	3	+	35000478	35026141	789624	20	200,211,21,85,104,96,81,113,151,199,144,119,143,104,174,88,12,108,121,421,	0,8832,9136,9601,9805,9997,11187,12969,13254,13902,15537,18904,19104,21215,21404,21664,22613,22949,23140,25762,
#Partially deleted in new
chr19	35000322	35026469	chr19:35000322-35026469	0	+	35000478	35013603	789624	18	164,211,21,85,104,96,81,151,199,144,119,143,104,174,88,108,121,421,	0,8796,9100,9565,9769,9961,11151,13218,13866,15501,18868,19068,21179,21368,21628,22913,23104,25726,
#Partially deleted in new
chr19	35000425	35026469	chr19:35000425-35026469	1	+	35000478	35026141	789624	18	61,211,85,104,96,81,113,151,199,144,119,143,104,174,88,108,121,421,	0,8693,9462,9666,9858,11048,12830,13115,13763,15398,18765,18965,21076,21265,21525,22810,23001,25623,
#Partially deleted in new
chr19	35000455	35010639	chr19:35000455-35010639	1	+	35000478	35010472	789624	6	31,211,21,85,104,356,	0,8663,8967,9432,9636,9828,
#Partially deleted in new
chr19	35001139	35010339	chr19:35001139-35010339	0	+	35001139	35001139	8553170	6	105,211,21,85,104,56,	0,7979,8283,8748,8952,9144,
#Deleted in new
chr19	35009672	35010478	chr19:35009672-35010478	0	+	35009672	35009672	8553170	3	300,104,195,	0,419,611,
#Partially deleted in new
chr19	35011483	35013584	chr19:35011483-35013584	0	+	35011483	35011483	8553170	2	71,329,	0,1772,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35012987	35014365	chr19:35012987-35014365	0	+	35012987	35012987	8553170	2	704,177,	0,1201,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35013606	35014879	chr19:35013606-35014879	0	+	35013606	35013606	8553170	2	85,691,	0,582,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35014960	35025335	chr19:35014960-35025335	3	-	35014960	35014960	8553170	2	92,434,	0,9941,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	35014968	35026469	chr19:35014968-35026469	0	+	35014968	35014968	8553170	9	999,119,143,104,174,88,108,121,421,	0,4222,4422,6533,6722,6982,8267,8458,11080,
#Deleted in new
chr19	35023297	35023830	chr19:35023297-35023830	0	+	35023297	35023297	8553170	2	46,404,	0,129,
#Partially deleted in new
chr19	35030465	35040449	chr19:35030465-35040449	3	+	35030820	35039701	789624	6	395,167,241,142,72,653,	0,2062,3033,8651,9169,9331,
#Partially deleted in new
chr19	35030625	35040449	chr19:35030625-35040449	1	+	35030820	35039701	789624	5	235,167,241,142,815,	0,1902,2873,8491,9009,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	35030712	35037720	chr19:35030712-35037720	1	+	35030820	35034098	789624	3	148,167,4222,	0,1815,2786,
#Partially deleted in new
chr19	35030732	35040073	chr19:35030732-35040073	1	+	35030820	35039701	789624	6	128,167,28,142,72,277,	0,1795,2979,8384,8902,9064,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	35031300	35037697	chr19:35031300-35037697	1	+	35032586	35034098	789624	3	480,167,4199,	0,1227,2198,
#Partially deleted in new
chr19	35031352	35039922	chr19:35031352-35039922	1	+	35032586	35039701	789624	6	428,167,241,142,72,126,	0,1175,2146,7764,8282,8444,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35036898	35040449	chr19:35036898-35040449	0	+	35036898	35036898	8553170	2	2808,653,	0,2898,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35037855	35039661	chr19:35037855-35039661	0	+	35037855	35037855	8553170	2	1403,27,	0,1779,
#Partially deleted in new
chr19	35040505	35066571	chr19:35040505-35066571	1	+	35042506	35066287	0	13	40,801,102,42,130,123,41,166,191,96,143,165,323,	0,1216,8784,8969,19167,19368,19623,19841,20121,24744,25033,25362,25743,
#Partially deleted in new
chr19	35040505	35066571	chr19:35040505-35066571	3	+	35042506	35066287	0	14	40,151,70,102,42,130,123,41,166,191,96,143,165,323,	0,1216,1947,8784,8969,19167,19368,19623,19841,20121,24744,25033,25362,25743,
#Partially deleted in new
chr19	35041748	35059753	chr19:35041748-35059753	0	+	35042506	35059753	789624	5	124,215,102,42,81,	0,559,7541,7726,17924,
#Partially deleted in new
chr19	35041765	35066558	chr19:35041765-35066558	1	+	35042506	35066287	789624	8	107,70,130,191,96,143,165,310,	0,687,17907,18861,23484,23773,24102,24483,
#Partially deleted in new
chr19	35041766	35066558	chr19:35041766-35066558	0	+	35041766	35041766	8553170	9	106,70,324,41,166,191,96,143,691,	0,686,17906,18362,18580,18860,23483,23772,24101,
#Partially deleted in new
chr19	35049270	35066558	chr19:35049270-35066558	0	+	35049270	35049270	8553170	11	121,42,76,130,123,41,166,191,96,143,691,	0,204,1175,10402,10603,10858,11076,11356,15979,16268,16597,
#Partially deleted in new
chr19	35049270	35060081	chr19:35049270-35060081	0	+	35049270	35049270	8553170	3	246,130,208,	0,10402,10603,
#Partially deleted in new
chr19	35049315	35066571	chr19:35049315-35066571	0	+	35049315	35049315	8553170	6	201,840,191,96,143,704,	0,10357,11311,15934,16223,16552,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	35059058	35106304	chr19:35059058-35106304	3	-	35059058	35059058	789624	4	720,145,183,76,	0,27897,40146,47170,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35059142	35059980	chr19:35059142-35059980	0	+	35059142	35059142	8553170	2	243,308,	0,530,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35090929	35105736	chr19:35090929-35105736	1	+	35090929	35090929	8553170	2	191,1238,	0,13569,
#Partially deleted in new
chr19	35090984	35107316	chr19:35090984-35107316	3	+	35090984	35090984	8553170	2	136,1074,	0,15258,
#Deleted in new
chr19	35105968	35107237	chr19:35105968-35107237	0	+	35105968	35105968	8553170	1	1269,	0,
#Deleted in new
chr19	35105968	35107320	chr19:35105968-35107320	0	+	35105968	35105968	8553170	1	1352,	0,
#Partially deleted in new
chr19	35106085	35113664	chr19:35106085-35113664	0	+	35106085	35106085	8553170	2	751,318,	0,7261,
#Partially deleted in new
chr19	35106509	35124297	chr19:35106509-35124297	3	+	35119376	35123457	8553170	9	327,162,96,54,33,24,190,38,857,	0,6837,9754,12853,14568,14712,16255,16761,16931,
#Partially deleted in new
chr19	35115878	35124324	chr19:35115878-35124324	3	+	35119376	35123457	789624	9	81,96,54,33,24,75,37,38,884,	0,385,3484,5199,5343,6886,7039,7392,7562,
#Partially deleted in new
chr19	35115894	35124323	chr19:35115894-35124323	1	+	35119376	35123457	789624	9	65,96,84,54,33,24,190,38,883,	0,369,3273,3468,5183,5327,6870,7376,7546,
#Partially deleted in new
chr19	35115940	35123657	chr19:35115940-35123657	1	+	35119376	35123457	789624	10	100,96,84,54,33,24,75,37,38,217,	0,323,3227,3422,5137,5281,6824,6977,7330,7500,
#Partially deleted in new
chr19	35116261	35124323	chr19:35116261-35124323	1	+	35119376	35123457	789624	8	98,84,54,33,24,190,38,883,	0,2906,3101,4816,4960,6503,7009,7179,
#Partially deleted in new
chr19	35116261	35124323	chr19:35116261-35124323	1	+	35119376	35123457	789624	7	98,54,33,24,190,38,883,	0,3101,4816,4960,6503,7009,7179,
#Partially deleted in new
chr19	35116261	35123655	chr19:35116261-35123655	1	+	35117305	35123457	789624	10	98,122,84,54,33,24,75,37,38,215,	0,995,2906,3101,4816,4960,6503,6656,7009,7179,
#Partially deleted in new
chr19	35116317	35121665	chr19:35116317-35121665	1	+	35119376	35121334	789624	4	42,54,33,444,	0,3045,4760,4904,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35116317	35119888	chr19:35116317-35119888	0	+	35116317	35116317	8553170	2	42,526,	0,3045,
#Partially deleted in new
chr19	35116318	35123615	chr19:35116318-35123615	1	+	35119376	35123457	789624	8	41,54,33,24,162,37,38,175,	0,3044,4759,4903,6359,6599,6952,7122,
#Partially deleted in new
chr19	35116318	35123280	chr19:35116318-35123280	1	+	35119376	35122958	789624	6	41,54,33,24,75,363,	0,3044,4759,4903,6446,6599,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	35116319	35121847	chr19:35116319-35121847	1	+	35119376	35121334	789624	5	40,84,54,33,626,	0,2848,3043,4758,4902,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	35118026	35123652	chr19:35118026-35123652	1	+	35119376	35123457	789624	9	98,84,54,33,24,162,37,38,212,	0,1141,1336,3051,3195,4651,4891,5244,5414,
#Partially deleted in new
chr19	35118529	35123657	chr19:35118529-35123657	1	+	35119376	35123457	789624	8	70,54,33,24,75,37,38,217,	0,833,2548,2692,4235,4388,4741,4911,
#Partially deleted in new
chr19	35119362	35123286	chr19:35119362-35123286	1	+	35119376	35122958	789624	4	54,33,24,522,	0,1715,1859,3402,
#Deleted in new
chr19	35122699	35122764	chr19:35122699-35122764	3	+	35122699	35122699	5263520	1	65,	0,
#Partially deleted in new
chr19	35124512	35135200	chr19:35124512-35135200	3	-	35125192	35134680	789624	9	995,506,165,170,72,72,72,72,690,	0,1757,2340,6873,7276,7458,9180,9520,9998,
#Partially deleted in new
chr19	35124512	35135200	chr19:35124512-35135200	1	-	35125398	35134680	789624	8	995,748,170,72,72,72,72,690,	0,1757,6873,7276,7458,9180,9520,9998,
#Partially deleted in new
chr19	35124665	35142451	chr19:35124665-35142451	0	-	35124665	35124665	8553170	10	842,506,165,170,72,72,72,72,47,182,	0,1604,2187,6720,7123,7305,9027,9367,9845,17604,
#Partially deleted in new
chr19	35124673	35133741	chr19:35124673-35133741	0	-	35126167	35133741	789624	6	2102,165,170,72,72,49,	0,2179,6712,7115,7297,9019,
#Partially deleted in new
chr19	35124673	35134643	chr19:35124673-35134643	0	-	35124673	35124673	8553170	6	193,70,72,72,72,133,	0,7117,7297,9019,9359,9837,
#Partially deleted in new
chr19	35126700	35134012	chr19:35126700-35134012	0	-	35126700	35126700	8553170	6	317,170,70,72,127,320,	0,4685,5090,5270,6617,6992,
#Deleted in new
chr19	35131083	35134863	chr19:35131083-35134863	1	-	35131227	35134680	789624	6	472,72,72,72,72,353,	0,705,887,2609,2949,3427,
#Deleted in new
chr19	35131137	35134638	chr19:35131137-35134638	0	-	35131137	35131137	8553170	5	418,72,72,412,128,	0,651,833,2555,3373,
#Deleted in new
chr19	35131531	35134628	chr19:35131531-35134628	0	-	35131531	35131531	8553170	7	24,72,72,127,72,72,118,	0,257,439,1786,2161,2501,2979,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	35137644	35139580	chr19:35137644-35139580	3	-	35137644	35137644	8553170	1	1936,	0,
#Deleted in new
chr19	35138807	35143109	chr19:35138807-35143109	3	+	35140079	35142742	0	8	87,65,33,75,37,50,52,193,	0,1268,1789,2324,2728,3664,3912,4109,
#Deleted in new
chr19	35138823	35143362	chr19:35138823-35143362	0	+	35138823	35138823	8553170	9	71,65,33,75,37,50,52,119,86,	0,1252,1773,2308,2712,3648,3896,4093,4453,
#Partially deleted in new
chr19	35138830	35151336	chr19:35138830-35151336	3	+	35138830	35138830	8553170	11	64,65,33,75,37,50,52,119,120,30,83,	0,1245,1766,2301,2705,3641,3889,4086,4414,9863,12423,
#Deleted in new
chr19	35138840	35143035	chr19:35138840-35143035	0	+	35138840	35138840	8553170	6	54,65,33,441,50,316,	0,1235,1756,2291,3631,3879,
#Deleted in new
chr19	35138992	35143054	chr19:35138992-35143054	1	+	35140079	35142742	0	8	240,65,33,75,37,50,52,138,	0,1083,1604,2139,2543,3479,3727,3924,
#Deleted in new
chr19	35139117	35142772	chr19:35139117-35142772	1	+	35140079	35142742	0	7	115,65,33,75,37,50,53,	0,958,1479,2014,2418,3354,3602,
#Deleted in new
chr19	35139440	35143050	chr19:35139440-35143050	1	+	35140079	35142742	0	8	148,65,33,75,37,50,52,134,	0,635,1156,1691,2095,3031,3279,3476,
#Deleted in new
chr19	35139725	35143048	chr19:35139725-35143048	1	+	35140079	35142742	0	8	42,65,33,75,37,50,52,132,	0,350,871,1406,1810,2746,2994,3191,
#Deleted in new
chr19	35139737	35143036	chr19:35139737-35143036	1	+	35140079	35142742	0	8	30,222,33,75,37,50,52,120,	0,181,859,1394,1798,2734,2982,3179,
#Deleted in new
chr19	35139912	35141249	chr19:35139912-35141249	0	+	35139912	35139912	8553170	3	228,33,118,	0,684,1219,
#Deleted in new
chr19	35140021	35143050	chr19:35140021-35143050	1	+	35140079	35142742	0	6	119,33,75,37,50,331,	0,575,1110,1514,2450,2698,
#Deleted in new
chr19	35140104	35143052	chr19:35140104-35143052	0	+	35140104	35142742	789624	7	36,33,75,130,50,52,136,	0,492,1027,1338,2367,2615,2812,
#Deleted in new
chr19	35140864	35143055	chr19:35140864-35143055	0	+	35140864	35140864	8553170	5	342,37,50,52,139,	0,671,1607,1855,2052,
#Partially deleted in new
chr19	35143249	35154301	chr19:35143249-35154301	3	+	35143333	35153916	789624	6	115,30,75,43,41,408,	0,5444,8004,8190,8383,10644,
#Partially deleted in new
chr19	35143249	35154054	chr19:35143249-35154054	1	+	35143333	35153916	789624	6	115,30,75,34,41,161,	0,5444,8004,8190,8383,10644,
#Partially deleted in new
chr19	35143255	35149695	chr19:35143255-35149695	0	+	35143255	35143255	8553170	2	109,1002,	0,5438,
#Partially deleted in new
chr19	35143278	35154143	chr19:35143278-35154143	1	+	35143333	35153916	789624	5	86,30,229,41,250,	0,5415,7975,8354,10615,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	35154729	35159999	chr19:35154729-35159999	1	+	35155550	35159607	789624	5	80,61,81,57,484,	0,821,2691,3614,4786,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	35154729	35166761	chr19:35154729-35166761	1	+	35155550	35166423	789624	8	80,61,81,57,93,90,30,511,	0,821,2691,3614,5979,9426,11412,11521,
#Partially deleted in new
chr19	35154742	35169883	chr19:35154742-35169883	3	+	35155550	35169615	789624	9	67,61,81,57,93,90,30,75,318,	0,808,2678,3601,5966,9413,11399,11508,14823,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	35154746	35169782	chr19:35154746-35169782	0	+	35155550	35160765	789624	9	63,61,197,57,93,90,30,75,217,	0,804,2674,3597,5962,9409,11395,11504,14819,
#Partially deleted in new
chr19	35154752	35169859	chr19:35154752-35169859	1	+	35155550	35169615	789624	9	117,61,81,57,93,90,30,75,294,	0,798,2668,3591,5956,9403,11389,11498,14813,
#Partially deleted in new
chr19	35154752	35169865	chr19:35154752-35169865	1	+	35155550	35169615	789624	9	57,79,81,57,93,90,30,75,300,	0,780,2668,3591,5956,9403,11389,11498,14813,
#Partially deleted in new
chr19	35154766	35169633	chr19:35154766-35169633	0	+	35155550	35157432	789624	10	43,61,131,81,57,93,90,30,75,68,	0,784,2077,2654,3577,5942,9389,11375,11484,14799,
#Partially deleted in new
chr19	35154772	35169880	chr19:35154772-35169880	1	+	35155550	35169615	789624	8	839,81,57,93,90,30,75,315,	0,2648,3571,5936,9383,11369,11478,14793,
#Partially deleted in new
chr19	35154786	35169879	chr19:35154786-35169879	1	+	35155550	35166423	789624	9	23,61,81,57,93,90,30,178,314,	0,764,2634,3557,5922,9369,11355,11464,14779,
#Partially deleted in new
chr19	35154941	35169879	chr19:35154941-35169879	1	+	35155550	35169615	789624	9	91,61,81,57,93,90,30,75,314,	0,609,2479,3402,5767,9214,11200,11309,14624,
#Partially deleted in new
chr19	35160708	35169880	chr19:35160708-35169880	0	+	35160708	35160708	8553170	4	93,90,184,315,	0,3447,5433,8857,
#Partially deleted in new
chr19	35160762	35169880	chr19:35160762-35169880	0	+	35160762	35160762	8553170	3	39,75,315,	0,5488,8803,
#Partially deleted in new
chr19	35164034	35169881	chr19:35164034-35169881	1	+	35164076	35169615	789624	4	211,30,75,316,	0,2107,2216,5531,
#Partially deleted in new
chr19	35224799	35228729	chr19:35224799-35228729	3	-	35224824	35228680	789624	2	413,771,	0,3159,
#Deleted in new
chr19	35232290	35233003	chr19:35232290-35233003	7	-	35232290	35232290	16724991	1	713,	0,
#Partially deleted in new
chr19	35248329	35262723	chr19:35248329-35262723	0	+	35248329	35248329	8553170	5	173,345,120,57,178,	0,1985,10615,13595,14216,
#Partially deleted in new
chr19	35248391	35267962	chr19:35248391-35267962	1	+	35248878	35267859	789624	9	740,345,120,147,174,60,129,626,139,	0,1923,10553,14154,17967,18287,18447,18717,19432,
#Partially deleted in new
chr19	35248655	35267960	chr19:35248655-35267960	3	+	35248878	35267859	789624	10	476,345,120,57,147,174,60,132,626,137,	0,1659,10289,13269,13890,17703,18023,18180,18453,19168,
#Partially deleted in new
chr19	35248719	35267960	chr19:35248719-35267960	1	+	35248878	35267859	789624	10	412,345,120,57,147,174,60,132,626,137,	0,1595,10225,13205,13826,17639,17959,18116,18389,19104,
#Deleted in new
chr19	35248735	35250370	chr19:35248735-35250370	0	+	35248878	35250370	789624	2	241,56,	0,1579,
#Partially deleted in new
chr19	35248764	35267962	chr19:35248764-35267962	1	+	35248878	35267859	789624	8	367,345,120,174,60,132,626,139,	0,1550,10180,17594,17914,18071,18344,19059,
#Partially deleted in new
chr19	35248771	35267964	chr19:35248771-35267964	1	+	35248878	35267859	789624	9	360,345,120,147,174,60,132,626,141,	0,1543,10173,13774,17587,17907,18064,18337,19052,
#Partially deleted in new
chr19	35248878	35267963	chr19:35248878-35267963	1	+	35248878	35267859	789624	9	152,335,120,57,147,174,129,626,140,	0,1446,10066,13046,13667,17480,17960,18230,18945,
#Partially deleted in new
chr19	35249001	35267962	chr19:35249001-35267962	1	+	35249022	35267859	789624	7	130,345,174,60,132,626,139,	0,1313,17357,17677,17834,18107,18822,
#Partially deleted in new
chr19	35249018	35267934	chr19:35249018-35267934	1	+	35249022	35267859	789624	10	113,345,120,57,147,174,60,132,626,111,	0,1296,9926,12906,13527,17340,17660,17817,18090,18805,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	35249100	35259401	chr19:35249100-35259401	0	+	35249100	35249100	8553170	4	31,345,120,162,	0,1214,9844,10139,
#Partially deleted in new
chr19	35249346	35262588	chr19:35249346-35262588	0	+	35250403	35262588	789624	4	22,345,120,43,	0,968,9598,13199,
#Partially deleted in new
chr19	35250562	35266427	chr19:35250562-35266427	0	+	35250562	35266427	789624	4	97,120,57,69,	0,8382,11362,15796,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35251439	35253639	chr19:35251439-35253639	3	-	35251439	35251439	8553170	2	260,358,	0,1842,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35262845	35264804	chr19:35262845-35264804	3	+	35262845	35262845	8553170	2	253,763,	0,1196,
#Partially deleted in new
chr19	35266495	35267260	chr19:35266495-35267260	0	+	35266495	35266495	8553170	3	37,289,152,	0,183,613,
#Partially deleted in new
chr19	35268977	35279815	chr19:35268977-35279815	1	+	35269101	35279256	789624	9	186,47,119,151,88,59,95,129,649,	0,468,603,1469,1740,2105,9720,9968,10189,
#Partially deleted in new
chr19	35269064	35279812	chr19:35269064-35279812	3	+	35269101	35279256	789624	10	99,47,119,201,151,88,59,95,129,646,	0,381,516,738,1382,1653,2018,9633,9881,10102,
#Partially deleted in new
chr19	35269064	35279814	chr19:35269064-35279814	1	+	35269101	35279256	789624	10	99,47,119,201,151,88,59,95,105,648,	0,381,516,738,1382,1653,2018,9633,9905,10102,
#Partially deleted in new
chr19	35269101	35279256	chr19:35269101-35279256	1	+	35269101	35279256	789624	8	62,47,119,47,59,95,129,90,	0,344,479,1657,1981,9596,9844,10065,
#Partially deleted in new
chr19	35269107	35279308	chr19:35269107-35279308	1	+	35269107	35279179	789624	9	56,47,119,201,151,88,59,95,363,	0,338,473,695,1339,1610,1975,9590,9838,
#Partially deleted in new
chr19	35269107	35270517	chr19:35269107-35270517	0	+	35269107	35269831	789624	4	56,254,201,71,	0,338,695,1339,
#Partially deleted in new
chr19	35269114	35270097	chr19:35269114-35270097	0	+	35269114	35270097	789624	4	49,47,119,295,	0,331,466,688,
#Partially deleted in new
chr19	35269280	35269929	chr19:35269280-35269929	0	+	35269280	35269280	8553170	3	78,47,349,	0,165,300,
#Partially deleted in new
chr19	35269600	35279821	chr19:35269600-35279821	0	+	35269600	35269600	8553170	7	99,795,88,59,95,129,655,	0,202,1117,1482,9097,9345,9566,
#Partially deleted in new
chr19	35270262	35278765	chr19:35270262-35278765	0	+	35270383	35278765	789624	4	335,88,59,68,	0,455,820,8435,
#Partially deleted in new
chr19	35270449	35279667	chr19:35270449-35279667	0	+	35270449	35279256	789624	5	148,88,59,377,501,	0,268,633,8248,8717,
#Partially deleted in new
chr19	35270493	35278792	chr19:35270493-35278792	0	+	35270493	35275790	789624	5	104,88,59,118,95,	0,224,589,5289,8204,
#Partially deleted in new
chr19	35271000	35279247	chr19:35271000-35279247	0	+	35271000	35279247	789624	4	141,95,129,81,	0,7697,7945,8166,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	35271082	35279813	chr19:35271082-35279813	0	+	35271082	35271082	8553170	6	59,344,118,95,129,647,	0,3999,4700,7615,7863,8084,
#Deleted in new
chr19	35276976	35279810	chr19:35276976-35279810	0	+	35276976	35276976	8553170	2	2098,644,	0,2190,
#Deleted in new
chr19	35278214	35279307	chr19:35278214-35279307	0	+	35278214	35278214	8553170	3	578,129,141,	0,731,952,
#Partially deleted in new
chr19	35280715	35285143	chr19:35280715-35285143	3	+	35282577	35285042	0	4	212,174,60,206,	0,1778,4073,4222,
#Partially deleted in new
chr19	35282345	35285143	chr19:35282345-35285143	1	+	35282577	35285042	0	3	322,60,206,	0,2443,2592,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	35282516	35285140	chr19:35282516-35285140	0	+	35282516	35282516	8553170	1	2624,	0,
#Partially deleted in new
chr19	35292124	35313804	chr19:35292124-35313804	3	+	35295408	35313454	789624	11	80,56,69,369,297,258,261,288,97,100,515,	0,2110,3261,3488,7429,8022,10323,17749,18422,19793,21165,
#Partially deleted in new
chr19	35292124	35299607	chr19:35292124-35299607	0	+	35295641	35299607	789624	4	80,56,369,54,	0,2110,3488,7429,
#Partially deleted in new
chr19	35292133	35313804	chr19:35292133-35313804	1	+	35295408	35312313	789624	12	71,56,69,369,297,258,261,288,97,100,45,515,	0,2101,3252,3479,7420,8013,10314,17740,18413,19784,20147,21156,
#Partially deleted in new
chr19	35292155	35299613	chr19:35292155-35299613	0	+	35295408	35299613	789624	5	49,38,69,369,60,	0,2097,3230,3457,7398,
#Partially deleted in new
chr19	35292160	35313804	chr19:35292160-35313804	1	+	35295641	35313454	789624	11	44,56,56,369,297,258,261,288,97,100,515,	0,2074,3294,3452,7393,7986,10287,17713,18386,19757,21129,
#Partially deleted in new
chr19	35292160	35299796	chr19:35292160-35299796	1	+	35295408	35299554	789624	5	44,56,69,130,243,	0,2074,3225,3452,7393,
#Partially deleted in new
chr19	35309805	35312009	chr19:35309805-35312009	0	+	35309805	35309805	8553170	3	356,97,92,	0,741,2112,
#Partially deleted in new
chr19	35310611	35312723	chr19:35310611-35312723	0	+	35310611	35310611	8553170	3	32,100,443,	0,1306,1669,
#Partially deleted in new
chr19	35319260	35332830	chr19:35319260-35332830	0	+	35332040	35332830	789624	4	172,42,56,284,	0,9928,12758,13286,
#Partially deleted in new
chr19	35319370	35336166	chr19:35319370-35336166	0	+	35319370	35319370	8553170	5	62,42,56,272,131,	0,9818,12648,13282,16665,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	35328663	35332931	chr19:35328663-35332931	0	+	35328663	35328663	8553170	4	187,42,56,338,	0,525,3355,3930,
#Partially deleted in new
chr19	35329165	35336134	chr19:35329165-35336134	0	+	35332040	35332660	789624	4	65,56,347,99,	0,2853,3412,6870,
#Partially deleted in new
chr19	35329168	35347355	chr19:35329168-35347355	3	+	35332040	35346697	0	12	62,56,378,306,258,264,264,97,76,119,85,790,	0,2850,3378,6867,11712,12174,12533,15660,15882,16433,16982,17397,
#Partially deleted in new
chr19	35329175	35336191	chr19:35329175-35336191	0	+	35329175	35329175	8553170	4	55,56,331,156,	0,2843,3418,6860,
#Partially deleted in new
chr19	35329175	35336063	chr19:35329175-35336063	0	+	35332040	35336063	789624	4	55,148,372,28,	0,2751,3377,6860,
#Partially deleted in new
chr19	35329186	35347355	chr19:35329186-35347355	1	+	35332040	35346697	0	14	44,56,378,306,267,264,258,264,264,97,76,119,85,790,	0,2832,3360,6849,8568,8981,11694,12156,12515,15642,15864,16415,16964,17379,
#Partially deleted in new
chr19	35329186	35347355	chr19:35329186-35347355	1	+	35332040	35346697	0	13	44,56,378,306,267,258,264,264,97,76,119,85,790,	0,2832,3360,6849,8568,11694,12156,12515,15642,15864,16415,16964,17379,
#Partially deleted in new
chr19	35329186	35336300	chr19:35329186-35336300	0	+	35332040	35336300	789624	5	44,88,56,378,265,	0,1386,2832,3360,6849,
#Partially deleted in new
chr19	35329186	35332912	chr19:35329186-35332912	0	+	35332040	35332912	789624	3	44,148,366,	0,2740,3360,
#Partially deleted in new
chr19	35329186	35336146	chr19:35329186-35336146	0	+	35329186	35329186	8553170	3	44,906,111,	0,2832,6849,
#Partially deleted in new
chr19	35329186	35336042	chr19:35329186-35336042	0	+	35332040	35336042	789624	4	44,169,372,7,	0,2719,3366,6849,
#Partially deleted in new
chr19	35329186	35337977	chr19:35329186-35337977	0	+	35329186	35329186	8553170	3	44,306,223,	0,6849,8568,
#Partially deleted in new
chr19	35329186	35341724	chr19:35329186-35341724	0	+	35329186	35329186	8553170	4	44,258,264,23,	0,11694,12156,12515,
#Deleted in new
chr19	35329186	35329911	chr19:35329186-35329911	0	+	35329186	35329186	8553170	2	139,442,	0,283,
#Partially deleted in new
chr19	35329186	35340961	chr19:35329186-35340961	0	+	35332040	35340961	789624	4	44,56,378,81,	0,2832,3360,11694,
#Partially deleted in new
chr19	35329186	35340950	chr19:35329186-35340950	0	+	35332040	35340950	789624	4	44,56,372,70,	0,2832,3366,11694,
#Partially deleted in new
chr19	35329186	35336219	chr19:35329186-35336219	0	+	35329186	35329186	8553170	3	44,331,184,	0,3407,6849,
#Partially deleted in new
chr19	35329186	35337807	chr19:35329186-35337807	0	+	35329186	35329186	8553170	4	44,272,193,53,	0,3466,6962,8568,
#Partially deleted in new
chr19	35329186	35347266	chr19:35329186-35347266	0	+	35332040	35336318	789624	14	44,56,372,193,267,264,258,264,264,97,76,119,85,701,	0,2832,3366,6962,8568,8981,11694,12156,12515,15642,15864,16415,16964,17379,
#Partially deleted in new
chr19	35329186	35333090	chr19:35329186-35333090	0	+	35329186	35329186	8553170	2	44,538,	0,3366,
#Deleted in new
chr19	35329187	35329928	chr19:35329187-35329928	0	+	35329187	35329187	8553170	2	43,562,	0,179,
#Partially deleted in new
chr19	35329187	35341029	chr19:35329187-35341029	0	+	35329187	35329187	8553170	4	43,56,331,149,	0,2831,3406,11693,
#Partially deleted in new
chr19	35329187	35338413	chr19:35329187-35338413	0	+	35329187	35329187	8553170	3	43,267,246,	0,8567,8980,
#Partially deleted in new
chr19	35329194	35341843	chr19:35329194-35341843	0	+	35329194	35329194	8553170	2	36,963,	0,11686,
#Partially deleted in new
chr19	35329211	35346929	chr19:35329211-35346929	1	+	35332915	35346697	0	13	19,372,193,267,264,258,264,264,97,76,119,85,364,	0,3341,6937,8543,8956,11669,12131,12490,15617,15839,16390,16939,17354,
#Partially deleted in new
chr19	35329211	35346929	chr19:35329211-35346929	1	+	35332040	35346198	0	13	19,56,378,306,267,264,258,264,264,97,76,85,364,	0,2807,3335,6824,8543,8956,11669,12131,12490,15617,15839,16939,17354,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35330842	35331920	chr19:35330842-35331920	3	+	35330842	35330842	8553170	2	222,213,	0,865,
#Partially deleted in new
chr19	35332015	35346766	chr19:35332015-35346766	1	+	35332040	35346697	0	11	59,378,306,258,264,264,97,76,119,85,201,	0,531,4020,8865,9327,9686,12813,13035,13586,14135,14550,
#Partially deleted in new
chr19	35332545	35338170	chr19:35332545-35338170	0	+	35332545	35336318	789624	4	379,91,267,3,	0,3705,5209,5622,
#Deleted in new
chr19	35336052	35336661	chr19:35336052-35336661	0	+	35336052	35336514	789624	1	609,	0,
#Partially deleted in new
chr19	35338253	35345126	chr19:35338253-35345126	0	+	35338253	35341527	789624	6	178,258,81,264,97,76,	0,2627,3272,3448,6575,6797,
#Partially deleted in new
chr19	35341100	35341883	chr19:35341100-35341883	0	+	35341100	35341100	8553170	2	38,541,	0,242,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35344730	35345424	chr19:35344730-35345424	0	+	35344730	35344730	8553170	2	195,374,	0,320,
#Deleted in new
chr19	35345512	35345627	chr19:35345512-35345627	3	+	35345512	35345512	5263520	1	115,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	35351551	35353862	chr19:35351551-35353862	3	+	35351551	35352454	0	1	2311,	0,
#Deleted in new
chr19	35358459	35360485	chr19:35358459-35360485	3	+	35358890	35359931	789624	2	190,1606,	0,420,
#Deleted in new
chr19	35358820	35360002	chr19:35358820-35360002	1	+	35358890	35359931	789624	1	1182,	0,
#Deleted in new
chr19	35370928	35372962	chr19:35370928-35372962	3	+	35371359	35372400	789624	2	190,1614,	0,420,
#Deleted in new
chr19	35371289	35372471	chr19:35371289-35372471	1	+	35371359	35372400	789624	1	1182,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35382171	35384052	chr19:35382171-35384052	7	+	35382171	35382171	16724991	2	291,1103,	0,778,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	35399547	35409493	chr19:35399547-35409493	0	+	35399547	35399547	8553170	5	110,59,113,153,208,	0,1511,7037,9451,9738,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	35399581	35415541	chr19:35399581-35415541	0	+	35399581	35399581	8553170	6	76,113,153,187,121,235,	0,7003,9417,9704,11580,15725,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	35405606	35416840	chr19:35405606-35416840	1	+	35405606	35405606	789624	5	75,2567,187,121,362,	0,978,3679,5555,10872,
#Partially deleted in new
chr19	35407769	35408493	chr19:35407769-35408493	7	+	35407769	35407769	16724991	2	324,96,	0,628,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	35408824	35419385	chr19:35408824-35419385	0	+	35408824	35408824	8553170	3	327,121,210,	0,2337,10351,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	35414880	35415149	chr19:35414880-35415149	3	-	35414880	35414880	8553170	1	269,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35424061	35424652	chr19:35424061-35424652	3	-	35424061	35424061	8553170	2	389,61,	0,530,
#Partially deleted in new
chr19	35432956	35434642	chr19:35432956-35434642	3	-	35432956	35432956	8553170	4	146,245,171,438,	0,632,984,1248,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35443906	35451456	chr19:35443906-35451456	0	+	35443906	35443906	8553170	2	16,304,	0,7246,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35448300	35451767	chr19:35448300-35451767	3	+	35449714	35450707	789624	2	79,2054,	0,1413,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	35449714	35451765	chr19:35449714-35451765	1	+	35449714	35450707	789624	1	2051,	0,
#Partially deleted in new
chr19	35487323	35495558	chr19:35487323-35495558	0	-	35487323	35487323	8553170	6	143,48,45,42,39,168,	0,388,1117,1338,1478,8067,
#Deleted in new
chr19	35487323	35490531	chr19:35487323-35490531	1	-	35487427	35490442	789624	5	143,48,45,39,176,	0,388,1117,1478,3032,
#Deleted in new
chr19	35487325	35490531	chr19:35487325-35490531	3	-	35487427	35490442	789624	6	141,48,45,42,39,176,	0,386,1115,1336,1476,3030,
#Partially deleted in new
chr19	35497219	35513652	chr19:35497219-35513652	1	-	35498715	35513475	0	16	319,48,24,72,48,48,57,48,48,51,69,183,51,57,201,603,	0,1496,1654,2738,3313,4916,5610,8498,8719,12691,12964,14191,14543,15201,15370,15830,
#Partially deleted in new
chr19	35497219	35510431	chr19:35497219-35510431	1	-	35498715	35510427	789624	13	319,48,24,72,42,48,48,57,48,48,51,69,61,	0,1496,1654,2738,3158,3313,4916,5610,8498,8719,12691,12964,13151,
#Partially deleted in new
chr19	35497219	35501911	chr19:35497219-35501911	1	-	35498715	35501903	0	6	319,48,24,72,48,89,	0,1496,1654,2738,3313,4603,
#Partially deleted in new
chr19	35497219	35510211	chr19:35497219-35510211	0	-	35498715	35510211	789624	14	319,48,24,72,42,48,48,57,48,48,54,36,51,28,	0,1496,1654,2738,3158,3313,4916,5610,8498,8719,10238,10985,12691,12964,
#Partially deleted in new
chr19	35497219	35502879	chr19:35497219-35502879	0	-	35498715	35502879	789624	8	319,35,166,24,72,48,48,50,	0,427,1378,1654,2738,3313,4916,5610,
#Partially deleted in new
chr19	35497219	35510439	chr19:35497219-35510439	0	-	35510190	35510427	789624	14	319,35,48,24,72,42,48,48,57,48,48,51,69,61,	0,427,1496,1654,2738,3158,3313,4916,5610,8498,8719,12691,12964,13159,
#Deleted in new
chr19	35497219	35497933	chr19:35497219-35497933	0	-	35497219	35497219	8553170	2	319,287,	0,427,
#Partially deleted in new
chr19	35497219	35510427	chr19:35497219-35510427	0	-	35497219	35497219	8553170	10	319,166,24,72,48,48,57,48,48,244,	0,1378,1654,2738,3313,4916,5610,8498,8719,12964,
#Partially deleted in new
chr19	35497220	35510442	chr19:35497220-35510442	0	-	35510190	35510427	789624	8	318,48,24,72,48,48,69,64,	0,1495,1653,2737,3312,8497,12963,13158,
#Partially deleted in new
chr19	35497220	35510470	chr19:35497220-35510470	0	-	35510190	35510427	789624	12	318,35,166,24,623,48,57,48,48,51,69,92,	0,426,1377,1653,2737,4915,5609,8497,8718,12690,12963,13158,
#Partially deleted in new
chr19	35497221	35510439	chr19:35497221-35510439	1	-	35498715	35510427	789624	11	317,48,24,72,48,48,57,48,48,69,69,	0,1494,1652,2736,3311,4914,5608,8496,8717,12962,13149,
#Partially deleted in new
chr19	35497222	35510435	chr19:35497222-35510435	0	-	35510190	35510427	789624	12	316,48,24,72,42,48,48,57,48,48,69,57,	0,1493,1651,2735,3155,3310,4913,5607,8495,8716,12961,13156,
#Partially deleted in new
chr19	35497284	35510470	chr19:35497284-35510470	1	-	35498715	35510427	0	12	254,48,24,72,48,48,57,48,48,51,69,100,	0,1431,1589,2673,3248,4851,5545,8433,8654,12626,12899,13086,
#Partially deleted in new
chr19	35497305	35510459	chr19:35497305-35510459	1	-	35498715	35510427	789624	12	233,48,24,72,42,48,48,48,48,51,69,89,	0,1410,1568,2652,3072,3227,4830,8412,8633,12605,12878,13065,
#Partially deleted in new
chr19	35497310	35500429	chr19:35497310-35500429	0	-	35497310	35497310	8553170	4	228,48,24,472,	0,1405,1563,2647,
#Partially deleted in new
chr19	35497336	35510446	chr19:35497336-35510446	1	-	35498715	35510427	789624	13	202,48,24,72,48,48,57,48,48,36,51,69,76,	0,1379,1537,2621,3196,4799,5493,8381,8602,10868,12574,12847,13034,
#Partially deleted in new
chr19	35497337	35499282	chr19:35497337-35499282	0	-	35497337	35497337	8553170	2	201,567,	0,1378,
#Partially deleted in new
chr19	35497337	35499282	chr19:35497337-35499282	0	-	35497337	35497337	8553170	3	201,48,409,	0,1378,1536,
#Partially deleted in new
chr19	35497337	35499282	chr19:35497337-35499282	0	-	35497337	35497337	8553170	4	201,35,166,409,	0,309,1260,1536,
#Partially deleted in new
chr19	35497337	35499148	chr19:35497337-35499148	0	-	35497337	35497337	8553170	2	201,551,	0,1260,
#Partially deleted in new
chr19	35497447	35513482	chr19:35497447-35513482	3	-	35498715	35513475	0	18	91,48,24,72,48,48,57,48,48,60,54,36,51,69,51,57,201,433,	0,1268,1426,2510,3085,4688,5382,8270,8491,8678,10010,10757,12463,12736,14315,14973,15142,15602,
#Partially deleted in new
chr19	35497447	35513481	chr19:35497447-35513481	1	-	35498715	35513475	0	17	91,48,24,72,42,48,48,57,48,48,60,51,69,51,57,201,432,	0,1268,1426,2510,2930,3085,4688,5382,8270,8491,8678,12463,12736,14315,14973,15142,15602,
#Partially deleted in new
chr19	35497468	35510509	chr19:35497468-35510509	0	-	35497468	35497468	8553170	11	70,48,24,72,48,48,57,48,111,69,27,	0,1247,1405,2489,3064,4667,5361,8249,8470,12715,13014,
#Partially deleted in new
chr19	35497470	35510439	chr19:35497470-35510439	1	-	35498715	35510427	789624	16	68,48,24,72,42,48,48,57,48,48,60,54,36,51,69,69,	0,1245,1403,2487,2907,3062,4665,5359,8247,8468,8655,9987,10734,12440,12713,12900,
#Partially deleted in new
chr19	35497477	35510249	chr19:35497477-35510249	0	-	35498715	35510249	789624	10	61,166,24,72,48,48,57,48,48,66,	0,1120,1396,2480,3055,4658,5352,8240,8461,12706,
#Partially deleted in new
chr19	35497489	35510425	chr19:35497489-35510425	1	-	35498715	35505965	0	12	49,35,48,24,72,48,48,57,48,48,69,47,	0,157,1226,1384,2468,3043,4646,5340,8228,8449,12694,12889,
#Partially deleted in new
chr19	35497491	35501878	chr19:35497491-35501878	0	-	35498715	35501878	789624	5	47,48,72,48,56,	0,1224,2466,3041,4331,
#Partially deleted in new
chr19	35497498	35501892	chr19:35497498-35501892	0	-	35497498	35501892	789624	6	40,48,24,72,48,92,	0,1217,1375,2459,3034,4302,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35498246	35499138	chr19:35498246-35499138	0	-	35498246	35498246	8553170	2	517,265,	0,627,
#Partially deleted in new
chr19	35498501	35510428	chr19:35498501-35510428	1	-	35498715	35510427	789624	12	262,24,72,42,48,48,57,48,48,51,69,58,	0,372,1456,1876,2031,3634,4328,7216,7437,11409,11682,11869,
#Partially deleted in new
chr19	35498597	35510410	chr19:35498597-35510410	1	-	35498715	35505965	0	9	166,24,72,48,48,57,48,48,227,	0,276,1360,1935,3538,4232,7120,7341,11586,
#Partially deleted in new
chr19	35498715	35510435	chr19:35498715-35510435	0	-	35510190	35510427	789624	12	48,24,72,48,48,57,48,48,60,51,69,57,	0,158,1242,1817,3420,4114,7002,7223,7410,11195,11468,11663,
#Partially deleted in new
chr19	35498715	35510435	chr19:35498715-35510435	0	-	35510190	35510427	789624	14	48,24,72,48,48,57,48,48,60,156,36,51,69,57,	0,158,1242,1817,3420,4114,7002,7223,7410,7794,9489,11195,11468,11663,
#Partially deleted in new
chr19	35498715	35510435	chr19:35498715-35510435	0	-	35510190	35510427	789624	12	48,24,72,48,48,57,48,48,36,51,69,57,	0,158,1242,1817,3420,4114,7002,7223,9489,11195,11468,11663,
#Partially deleted in new
chr19	35498715	35510435	chr19:35498715-35510435	0	-	35510190	35510427	789624	13	48,24,72,42,48,48,57,48,48,36,51,69,57,	0,158,1242,1662,1817,3420,4114,7002,7223,9489,11195,11468,11663,
#Partially deleted in new
chr19	35498715	35510435	chr19:35498715-35510435	0	-	35510190	35510427	789624	13	48,24,72,48,48,57,48,48,60,36,51,69,57,	0,158,1242,1817,3420,4114,7002,7223,7410,9489,11195,11468,11663,
#Partially deleted in new
chr19	35498716	35510508	chr19:35498716-35510508	0	-	35510190	35510427	789624	11	47,24,72,48,48,57,48,48,51,69,130,	0,157,1241,1816,3419,4113,7001,7222,11194,11467,11662,
#Partially deleted in new
chr19	35499898	35510398	chr19:35499898-35510398	0	-	35499898	35499898	8553170	10	131,48,48,57,48,48,60,187,51,215,	0,634,2237,2931,5819,6040,6227,6580,10012,10285,
#Partially deleted in new
chr19	35499928	35510470	chr19:35499928-35510470	0	-	35510190	35510427	789624	13	101,42,48,48,57,48,48,60,54,36,51,69,92,	0,449,604,2207,2901,5789,6010,6197,7529,8276,9982,10255,10450,
#Partially deleted in new
chr19	35499928	35510470	chr19:35499928-35510470	0	-	35510190	35510427	789624	8	101,48,48,48,48,51,69,92,	0,604,2207,5789,6010,9982,10255,10450,
#Partially deleted in new
chr19	35499964	35502838	chr19:35499964-35502838	0	-	35499964	35499964	8553170	4	65,203,48,9,	0,413,2171,2865,
#Partially deleted in new
chr19	35499973	35510384	chr19:35499973-35510384	0	-	35499973	35505965	789624	8	56,48,48,57,48,48,51,201,	0,559,2162,2856,5744,5965,9937,10210,
#Partially deleted in new
chr19	35500084	35510470	chr19:35500084-35510470	0	-	35500084	35500084	8553170	7	496,48,57,48,48,69,100,	0,2051,2745,5633,5854,10099,10286,
#Partially deleted in new
chr19	35500206	35510452	chr19:35500206-35510452	0	-	35510190	35510427	789624	7	374,48,48,48,51,69,74,	0,1929,5511,5732,9704,9977,10172,
#Partially deleted in new
chr19	35500267	35510427	chr19:35500267-35510427	0	-	35500267	35500267	8553170	9	313,48,57,48,48,60,51,69,57,	0,1868,2562,5450,5671,5858,9643,9916,10103,
#Partially deleted in new
chr19	35500280	35510431	chr19:35500280-35510431	0	-	35500280	35500280	8553170	6	300,48,57,48,69,61,	0,1855,2549,5437,9903,10090,
#Partially deleted in new
chr19	35500444	35510470	chr19:35500444-35510470	0	-	35510190	35510427	789624	9	136,48,57,48,48,60,51,69,92,	0,1691,2385,5273,5494,5681,9466,9739,9934,
#Partially deleted in new
chr19	35500457	35506072	chr19:35500457-35506072	0	-	35500457	35500457	8553170	5	123,48,57,48,134,	0,1678,2372,5260,5481,
#Partially deleted in new
chr19	35500537	35510389	chr19:35500537-35510389	0	-	35500537	35500537	8553170	5	43,48,57,48,206,	0,1598,2292,5180,9646,
#Partially deleted in new
chr19	35503303	35513658	chr19:35503303-35513658	1	-	35503420	35513475	0	13	144,48,48,60,54,36,51,69,183,51,57,201,609,	0,2414,2635,2822,4154,4901,6607,6880,8107,8459,9117,9286,9746,
#Partially deleted in new
chr19	35503303	35510510	chr19:35503303-35510510	1	-	35503420	35505965	789624	4	144,48,48,327,	0,2414,2635,6880,
#Partially deleted in new
chr19	35503303	35510510	chr19:35503303-35510510	0	-	35510190	35510427	789624	8	144,48,48,54,36,51,69,132,	0,2414,2635,4154,4901,6607,6880,7075,
#Partially deleted in new
chr19	35503303	35510436	chr19:35503303-35510436	0	-	35510190	35510427	789624	5	144,48,51,69,58,	0,2414,6607,6880,7075,
#Partially deleted in new
chr19	35503303	35510469	chr19:35503303-35510469	1	-	35503420	35505965	789624	5	144,48,48,51,286,	0,2414,2635,6607,6880,
#Partially deleted in new
chr19	35503303	35510423	chr19:35503303-35510423	0	-	35503303	35503303	8553170	4	144,48,69,45,	0,2414,6880,7075,
#Partially deleted in new
chr19	35503303	35510440	chr19:35503303-35510440	0	-	35503303	35503303	8553170	3	144,48,257,	0,2414,6880,
#Partially deleted in new
chr19	35503303	35510510	chr19:35503303-35510510	0	-	35510190	35510427	789624	5	144,48,48,69,132,	0,2414,2635,6880,7075,
#Partially deleted in new
chr19	35503303	35510475	chr19:35503303-35510475	1	-	35503420	35510427	789624	5	144,48,48,69,105,	0,2414,2635,6880,7067,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	35503303	35508557	chr19:35503303-35508557	0	-	35503303	35503303	8553170	3	144,48,2619,	0,2414,2635,
#Partially deleted in new
chr19	35503303	35510231	chr19:35503303-35510231	0	-	35505986	35510231	789624	4	144,48,111,48,	0,2414,2635,6880,
#Partially deleted in new
chr19	35503305	35510470	chr19:35503305-35510470	1	-	35503420	35510427	789624	6	142,48,48,51,69,100,	0,2412,2633,6605,6878,7065,
#Partially deleted in new
chr19	35503314	35510435	chr19:35503314-35510435	1	-	35503420	35510427	789624	8	133,48,48,60,36,51,69,65,	0,2403,2624,2811,4890,6596,6869,7056,
#Partially deleted in new
chr19	35503330	35513481	chr19:35503330-35513481	1	-	35503420	35513475	0	10	117,48,48,51,69,183,51,57,201,432,	0,2387,2608,6580,6853,8080,8432,9090,9259,9719,
#Partially deleted in new
chr19	35503330	35513481	chr19:35503330-35513481	1	-	35503420	35513475	0	11	117,48,48,36,51,69,183,51,57,201,432,	0,2387,2608,4874,6580,6853,8080,8432,9090,9259,9719,
#Partially deleted in new
chr19	35503419	35513475	chr19:35503419-35513475	1	-	35503420	35513475	0	9	28,48,48,69,183,51,57,201,426,	0,2298,2519,6764,7991,8343,9001,9170,9630,
#Partially deleted in new
chr19	35503431	35510442	chr19:35503431-35510442	0	-	35503431	35510427	789624	7	16,48,48,60,51,69,72,	0,2286,2507,2694,6479,6752,6939,
#Deleted in new
chr19	35509518	35510418	chr19:35509518-35510418	0	-	35509518	35509518	8553170	3	443,69,48,	0,665,852,
#Deleted in new
chr19	35509913	35510457	chr19:35509913-35510457	0	-	35509913	35509913	8553170	2	339,87,	0,457,
#Partially deleted in new
chr19	35523366	35528310	chr19:35523366-35528310	1	-	35523509	35528281	789624	4	167,45,66,1667,	0,1344,1492,3277,
#Partially deleted in new
chr19	35523366	35528351	chr19:35523366-35528351	3	-	35523509	35528281	789624	5	167,45,66,234,445,	0,1344,1492,3277,4540,
#Partially deleted in new
chr19	35523366	35528221	chr19:35523366-35528221	0	-	35523509	35528221	789624	4	167,45,66,315,	0,1344,1492,4540,
#Partially deleted in new
chr19	35533411	35545316	chr19:35533411-35545316	3	+	35533527	35545170	0	11	183,178,97,107,91,119,82,152,163,98,219,	0,3401,4895,5165,8907,9078,9533,9928,10253,11497,11686,
#Partially deleted in new
chr19	35533454	35542989	chr19:35533454-35542989	0	+	35533527	35538374	789624	6	140,97,107,91,119,45,	0,4852,5122,8864,9035,9490,
#Partially deleted in new
chr19	35536782	35543026	chr19:35536782-35543026	0	+	35536949	35543026	789624	6	208,97,107,91,119,82,	0,1524,1794,5536,5707,6162,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	35540737	35546029	chr19:35540737-35546029	1	-	35540737	35540737	789624	4	847,324,363,93,	0,1013,2173,5199,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	35540738	35545040	chr19:35540738-35545040	3	-	35540738	35540738	8553170	3	846,324,2130,	0,1012,2172,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	35541293	35543139	chr19:35541293-35543139	1	-	35541293	35541293	8553170	3	291,178,229,	0,457,1617,
#Deleted in new
chr19	35541581	35545492	chr19:35541581-35545492	0	-	35541581	35541581	8553170	1	3911,	0,
#Deleted in new
chr19	35541959	35545503	chr19:35541959-35545503	1	-	35541959	35541959	8553170	3	115,187,185,	0,951,3359,
#Deleted in new
chr19	35545594	35547526	chr19:35545594-35547526	3	+	35545739	35547447	789624	7	222,70,60,137,85,122,203,	0,293,931,1077,1350,1524,1729,
#Deleted in new
chr19	35545599	35547523	chr19:35545599-35547523	0	+	35545911	35546575	789624	5	217,70,60,122,200,	0,288,926,1519,1724,
#Deleted in new
chr19	35545629	35547526	chr19:35545629-35547526	1	+	35546525	35547447	789624	6	328,60,137,85,122,203,	0,896,1042,1315,1489,1694,
#Deleted in new
chr19	35545639	35547522	chr19:35545639-35547522	0	+	35545639	35545639	8553170	6	177,70,60,358,122,199,	0,248,886,1032,1479,1684,
#Deleted in new
chr19	35545644	35546829	chr19:35545644-35546829	0	+	35545644	35545644	8553170	3	172,70,304,	0,243,881,
#Deleted in new
chr19	35545651	35546284	chr19:35545651-35546284	0	+	35545651	35545651	8553170	2	165,397,	0,236,
#Deleted in new
chr19	35545657	35547523	chr19:35545657-35547523	0	+	35545657	35545657	8553170	2	1583,200,	0,1666,
#Deleted in new
chr19	35545673	35547526	chr19:35545673-35547526	0	+	35545673	35545673	8553170	5	143,70,60,569,203,	0,214,852,998,1650,
#Deleted in new
chr19	35545680	35547397	chr19:35545680-35547397	1	+	35545739	35547244	789624	6	136,70,60,137,85,279,	0,207,845,991,1264,1438,
#Partially deleted in new
chr19	35550042	35563658	chr19:35550042-35563658	3	-	35550614	35563629	789624	22	601,92,102,134,146,124,155,169,151,137,176,193,135,110,199,269,253,114,204,60,144,41,	0,791,967,1404,2994,3663,4879,5123,5397,5633,6870,7612,8319,8534,8950,9762,10320,10776,12392,13166,13341,13575,
#Partially deleted in new
chr19	35550203	35557807	chr19:35550203-35557807	0	-	35550203	35550203	8553170	10	440,92,102,134,146,144,413,151,137,153,	0,630,806,1243,2833,3502,4718,5236,5472,7451,
#Partially deleted in new
chr19	35553705	35557737	chr19:35553705-35557737	0	-	35555792	35557737	789624	5	124,155,151,137,83,	0,1216,1734,1970,3949,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	35557955	35581954	chr19:35557955-35581954	3	+	35557955	35557955	8553170	3	72,319,103,	0,17658,23896,
#Partially deleted in new
chr19	35560818	35563339	chr19:35560818-35563339	0	-	35560818	35560818	8553170	3	114,204,131,	0,1616,2390,
#Partially deleted in new
chr19	35586160	35587206	chr19:35586160-35587206	1	+	35586259	35587146	789624	2	381,186,	0,860,
#Partially deleted in new
chr19	35586172	35587296	chr19:35586172-35587296	3	+	35586259	35587146	789624	2	369,321,	0,803,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	35597906	35601501	chr19:35597906-35601501	3	+	35597906	35597906	789624	3	51,114,197,	0,2734,3398,
#Partially deleted in new
chr19	35608284	35612666	chr19:35608284-35612666	3	-	35608284	35608284	8553170	2	519,49,	0,4333,
#Partially deleted in new
chr19	35612743	35623609	chr19:35612743-35623609	0	+	35612794	35618620	789624	17	149,63,33,25,106,160,70,83,58,125,131,163,81,511,133,133,734,	0,986,1124,1291,2298,2483,4380,4543,5111,5327,5825,6143,6680,6869,7451,9857,10132,
#Partially deleted in new
chr19	35612751	35623557	chr19:35612751-35623557	0	+	35612751	35612751	8553170	18	141,63,33,25,106,160,70,83,58,125,64,131,163,81,511,133,133,682,	0,978,1116,1283,2290,2475,4372,4535,5103,5319,5650,5817,6135,6672,6861,7443,9849,10124,
#Partially deleted in new
chr19	35612751	35614141	chr19:35612751-35614141	0	+	35612751	35612751	8553170	2	141,412,	0,978,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr19	35612762	35625349	chr19:35612762-35625349	0	+	35612794	35614110	789624	19	130,63,33,197,106,160,70,83,58,125,64,131,163,81,146,112,133,133,2474,	0,967,1105,1272,2279,2464,4361,4524,5092,5308,5639,5806,6124,6661,6850,7249,7432,9838,10113,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr19	35612769	35625349	chr19:35612769-35625349	3	+	35612794	35622993	789624	19	123,63,33,25,106,160,70,83,58,125,64,131,163,81,146,112,133,133,2474,	0,960,1098,1265,2272,2457,4354,4517,5085,5301,5632,5799,6117,6654,6843,7242,7425,9831,10106,
#Partially deleted in new
chr19	35612770	35615342	chr19:35612770-35615342	0	+	35612794	35613753	789624	6	122,124,33,25,106,116,	0,898,1097,1264,2271,2456,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr19	35612799	35625349	chr19:35612799-35625349	0	+	35612799	35612799	8553170	18	93,63,192,106,160,70,83,58,125,64,131,163,81,146,112,133,133,2474,	0,930,1068,2242,2427,4324,4487,5055,5271,5602,5769,6087,6624,6813,7212,7395,9801,10076,
#Partially deleted in new
chr19	35619943	35622884	chr19:35619943-35622884	0	+	35619943	35619943	8553170	3	384,133,9,	0,2657,2932,
#Partially deleted in new
chr19	35620057	35623608	chr19:35620057-35623608	0	+	35620057	35623232	789624	4	66,133,133,551,	0,137,2543,3000,
#Partially deleted in new
chr19	35629029	35637686	chr19:35629029-35637686	1	+	35629153	35637554	789624	9	252,154,85,75,152,333,118,195,245,	0,490,2110,2301,4071,4657,5226,8128,8412,
#Partially deleted in new
chr19	35629048	35637686	chr19:35629048-35637686	3	+	35629153	35637554	789624	10	233,154,85,75,66,176,333,118,195,245,	0,471,2091,2282,3887,4028,4638,5207,8109,8393,
#Partially deleted in new
chr19	35629066	35637655	chr19:35629066-35637655	1	+	35629153	35637554	789624	8	215,154,85,155,333,118,195,214,	0,453,2073,4031,4620,5189,8091,8375,
#Partially deleted in new
chr19	35629067	35637684	chr19:35629067-35637684	1	+	35629153	35637554	789624	5	214,154,57,103,243,	0,452,2072,8182,8374,
#Partially deleted in new
chr19	35629076	35637644	chr19:35629076-35637644	1	+	35629153	35637554	789624	8	205,154,85,75,155,333,118,203,	0,443,2063,2254,4021,4610,5179,8365,
#Partially deleted in new
chr19	35629090	35631912	chr19:35629090-35631912	0	+	35629090	35629090	8553170	4	191,154,85,582,	0,429,2049,2240,
#Partially deleted in new
chr19	35629130	35637641	chr19:35629130-35637641	1	+	35629153	35637554	789624	9	151,154,85,75,176,333,118,195,200,	0,389,2009,2200,3946,4556,5125,8027,8311,
#Deleted in new
chr19	35641744	35644871	chr19:35641744-35644871	1	+	35642460	35644852	789624	5	412,97,84,113,220,	0,689,870,2490,2907,
#Deleted in new
chr19	35641744	35644871	chr19:35641744-35644871	1	+	35642460	35644852	789624	6	412,265,81,480,113,220,	0,689,1220,1529,2490,2907,
#Deleted in new
chr19	35641744	35644871	chr19:35641744-35644871	3	+	35642460	35644852	789624	7	412,97,84,81,480,113,220,	0,689,870,1220,1529,2490,2907,
#Deleted in new
chr19	35641744	35643745	chr19:35641744-35643745	1	+	35642460	35643745	789624	6	412,97,84,81,159,161,	0,689,870,1220,1529,1840,
#Deleted in new
chr19	35641792	35644871	chr19:35641792-35644871	1	+	35643317	35644852	789624	6	364,84,81,480,113,220,	0,822,1172,1481,2442,2859,
#Deleted in new
chr19	35642138	35644871	chr19:35642138-35644871	1	+	35642460	35643745	789624	10	18,97,84,81,161,5,7,155,113,220,	0,295,476,826,1135,1297,1451,1460,2096,2513,
#Deleted in new
chr19	35642154	35644852	chr19:35642154-35644852	1	+	35642460	35644852	789624	6	376,84,81,480,113,201,	0,460,810,1119,2080,2497,
#Deleted in new
chr19	35643665	35644682	chr19:35643665-35644682	0	+	35643665	35644434	789624	2	88,448,	0,569,
#Partially deleted in new
chr19	35648222	35658861	chr19:35648222-35658861	3	+	35651243	35658647	789624	4	181,117,101,268,	0,3010,6348,10371,
#Partially deleted in new
chr19	35648336	35658782	chr19:35648336-35658782	1	+	35651243	35658647	8553170	4	67,117,101,189,	0,2896,6234,10257,
#Partially deleted in new
chr19	35648639	35658782	chr19:35648639-35658782	1	+	35651243	35658647	789624	4	254,117,101,189,	0,2593,5931,9954,
#Partially deleted in new
chr19	35648824	35658726	chr19:35648824-35658726	1	+	35651243	35658647	789624	4	84,117,101,133,	0,2408,5746,9769,
#Partially deleted in new
chr19	35651244	35658778	chr19:35651244-35658778	0	+	35651244	35658610	789624	2	105,185,	0,7349,
#Partially deleted in new
chr19	35666515	35678483	chr19:35666515-35678483	3	+	35666812	35678019	789624	8	23,88,201,75,108,180,84,509,	0,293,1938,6716,6922,9324,11296,11459,
#Partially deleted in new
chr19	35666812	35678465	chr19:35666812-35678465	1	+	35666812	35678019	789624	7	84,201,75,108,180,84,491,	0,1641,6419,6625,9027,10999,11162,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35667947	35673291	chr19:35667947-35673291	3	-	35667947	35667947	789624	2	738,57,	0,5287,
#Partially deleted in new
chr19	35683777	35684201	chr19:35683777-35684201	7	-	35683777	35683777	16724991	1	424,	0,
#Partially deleted in new
chr19	35704526	35717038	chr19:35704526-35717038	3	+	35714626	35716752	0	7	97,117,985,74,69,165,561,	0,8390,9996,11230,11412,11606,11951,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35704558	35713542	chr19:35704558-35713542	0	+	35704558	35704558	8553170	2	65,626,	0,8358,
#Partially deleted in new
chr19	35704570	35716497	chr19:35704570-35716497	0	+	35715979	35716497	789624	6	53,117,45,69,165,20,	0,8346,10892,11368,11562,11907,
#Partially deleted in new
chr19	35704578	35714339	chr19:35704578-35714339	0	+	35704578	35704578	8553170	3	45,117,193,	0,8338,9568,
#Partially deleted in new
chr19	35712927	35717038	chr19:35712927-35717038	1	+	35714626	35716752	0	6	106,985,74,69,165,561,	0,1595,2829,3011,3205,3550,
#Partially deleted in new
chr19	35713432	35717038	chr19:35713432-35717038	0	+	35714626	35716160	789624	4	22,985,165,561,	0,1090,2700,3045,
#Partially deleted in new
chr19	35718018	35738878	chr19:35718018-35738878	3	+	35718018	35738557	0	37	363,73,2021,114,151,280,56,276,95,99,114,147,96,118,114,185,90,105,74,116,92,138,159,121,79,161,228,1294,90,110,138,75,178,108,84,130,597,	0,1450,1765,4340,4549,4976,5428,5713,6618,6970,7201,7460,7704,8217,9137,9419,9679,9862,10079,10755,10966,11140,11948,12323,12519,12688,13889,14196,15578,15744,18671,18893,19067,19617,19840,20043,20263,
#Partially deleted in new
chr19	35720901	35721529	chr19:35720901-35721529	0	+	35720901	35720901	8553170	2	39,156,	0,472,
#Partially deleted in new
chr19	35733257	35737156	chr19:35733257-35737156	0	+	35733257	35733257	8553170	5	429,110,138,75,71,	0,505,3432,3654,3828,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	35735219	35738878	chr19:35735219-35738878	0	+	35735219	35735219	8553170	6	1767,178,108,84,130,597,	0,1866,2416,2639,2842,3062,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	35737467	35738496	chr19:35737467-35738496	0	+	35737467	35737467	8553170	4	276,84,130,215,	0,391,594,814,
#Partially deleted in new
chr19	35738800	35742450	chr19:35738800-35742450	3	-	35739279	35741180	789624	5	826,379,185,200,55,	0,909,1579,2223,3595,
#Deleted in new
chr19	35739156	35741335	chr19:35739156-35741335	1	-	35739279	35741180	789624	2	470,312,	0,1867,
#Partially deleted in new
chr19	35739214	35742453	chr19:35739214-35742453	1	-	35739279	35741180	789624	4	412,60,200,58,	0,495,1809,3181,
#Partially deleted in new
chr19	35739251	35745432	chr19:35739251-35745432	3	-	35744372	35745391	789624	11	375,379,185,205,224,96,76,99,113,88,85,	0,458,1128,1772,3144,4557,4818,5071,5374,5873,6096,
#Partially deleted in new
chr19	35739253	35742447	chr19:35739253-35742447	1	-	35739279	35741180	789624	5	373,379,185,200,58,	0,456,1126,1770,3136,
#Partially deleted in new
chr19	35739256	35742411	chr19:35739256-35742411	0	-	35740029	35741180	789624	5	370,377,185,200,16,	0,453,1123,1767,3139,
#Deleted in new
chr19	35739527	35740549	chr19:35739527-35740549	0	-	35739715	35740549	789624	3	99,60,170,	0,182,852,
#Deleted in new
chr19	35739535	35741104	chr19:35739535-35741104	0	-	35740029	35741104	789624	3	91,379,123,	0,174,1446,
#Deleted in new
chr19	35739823	35740596	chr19:35739823-35740596	0	-	35739823	35739823	8553170	2	265,217,	0,556,
#Deleted in new
chr19	35740016	35741347	chr19:35740016-35741347	0	-	35740016	35741180	789624	3	72,185,324,	0,363,1007,
#Partially deleted in new
chr19	35740739	35742449	chr19:35740739-35742449	0	-	35740739	35740739	8553170	2	484,54,	0,1656,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35741132	35741591	chr19:35741132-35741591	0	-	35741132	35741180	789624	2	91,109,	0,350,
#Partially deleted in new
chr19	35742463	35745418	chr19:35742463-35745418	0	-	35744372	35745391	789624	6	156,96,76,99,63,71,	0,1345,1606,1859,2661,2884,
#Partially deleted in new
chr19	35742528	35745442	chr19:35742528-35745442	3	-	35742718	35745391	789624	8	275,96,134,99,50,67,88,95,	0,1280,1483,1794,1962,2097,2596,2819,
#Partially deleted in new
chr19	35742528	35745397	chr19:35742528-35745397	0	-	35742528	35742528	8553170	6	275,96,76,659,88,50,	0,1280,1541,1794,2596,2819,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	35742528	35744660	chr19:35742528-35744660	0	-	35742528	35742528	8553170	3	1376,352,35,	0,1541,2097,
#Partially deleted in new
chr19	35742530	35744563	chr19:35742530-35744563	0	-	35742530	35742530	8553170	4	273,96,134,241,	0,1278,1481,1792,
#Partially deleted in new
chr19	35742530	35745157	chr19:35742530-35745157	0	-	35744419	35745157	789624	6	273,96,134,99,67,33,	0,1278,1481,1792,2095,2594,
#Partially deleted in new
chr19	35742530	35745176	chr19:35742530-35745176	0	-	35744372	35745176	789624	6	89,96,76,99,113,52,	0,1278,1539,1792,2095,2594,
#Partially deleted in new
chr19	35742531	35745445	chr19:35742531-35745445	1	-	35742597	35745391	789624	6	272,96,76,99,88,98,	0,1277,1538,1791,2593,2816,
#Partially deleted in new
chr19	35742531	35745405	chr19:35742531-35745405	1	-	35742718	35745391	789624	6	272,96,134,99,88,58,	0,1277,1480,1791,2593,2816,
#Partially deleted in new
chr19	35742531	35745426	chr19:35742531-35745426	0	-	35742531	35742531	789624	6	272,96,352,113,63,79,	0,1277,1538,2094,2593,2816,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	35742532	35745414	chr19:35742532-35745414	0	-	35742532	35742532	8553170	3	1372,1143,67,	0,1537,2815,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	35743010	35745442	chr19:35743010-35745442	0	-	35743010	35743010	8553170	4	894,76,865,95,	0,1059,1312,2337,
#Deleted in new
chr19	35743848	35745416	chr19:35743848-35745416	0	-	35744419	35745391	789624	6	56,76,99,67,88,69,	0,221,474,777,1276,1499,
#Deleted in new
chr19	35744103	35745398	chr19:35744103-35745398	0	-	35744103	35744103	8553170	4	42,416,63,51,	0,219,1021,1244,
#Deleted in new
chr19	35744346	35745422	chr19:35744346-35745422	0	-	35744346	35744376	789624	3	75,113,75,	0,279,1001,
#Deleted in new
chr19	35744662	35745441	chr19:35744662-35745441	0	-	35744662	35744662	8553170	3	319,63,94,	0,462,685,
#Deleted in new
chr19	35744794	35745353	chr19:35744794-35745353	0	-	35744794	35744794	8553170	2	187,229,	0,330,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	35745113	35747519	chr19:35745113-35747519	3	+	35745930	35746847	0	4	587,157,105,812,	0,721,1305,1594,
#Deleted in new
chr19	35745599	35746993	chr19:35745599-35746993	1	+	35745930	35746651	789624	3	101,157,575,	0,235,819,
#Deleted in new
chr19	35745618	35747004	chr19:35745618-35747004	1	+	35745930	35746847	0	4	82,119,105,297,	0,254,800,1089,
#Partially deleted in new
chr19	35745677	35754519	chr19:35745677-35754519	3	+	35745930	35752177	789624	11	23,157,105,76,51,30,86,167,141,74,127,	0,157,741,6498,6756,7126,7236,7409,8339,8568,8715,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35747056	35748288	chr19:35747056-35748288	0	-	35747056	35747056	8553170	2	425,160,	0,1072,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35747224	35753415	chr19:35747224-35753415	3	-	35747224	35747224	8553170	2	257,1455,	0,4736,
#Partially deleted in new
chr19	35748360	35754519	chr19:35748360-35754519	3	+	35748724	35754474	789624	9	398,76,51,30,86,167,141,74,127,	0,3815,4073,4443,4553,4726,5656,5885,6032,
#Partially deleted in new
chr19	35748360	35753817	chr19:35748360-35753817	0	+	35748360	35748360	8553170	6	398,76,51,30,86,731,	0,3815,4073,4443,4553,4726,
#Partially deleted in new
chr19	35748566	35752172	chr19:35748566-35752172	0	+	35748566	35748566	8553170	2	192,122,	0,3484,
#Partially deleted in new
chr19	35748575	35754519	chr19:35748575-35754519	0	+	35748575	35748575	8553170	6	183,76,566,167,141,274,	0,3600,3858,4511,5441,5670,
#Partially deleted in new
chr19	35748606	35754487	chr19:35748606-35754487	0	+	35748724	35752488	789624	7	152,76,55,112,1071,74,95,	0,3569,3827,4281,4480,5639,5786,
#Partially deleted in new
chr19	35748621	35753100	chr19:35748621-35753100	0	+	35748621	35748621	8553170	4	137,76,51,297,	0,3554,3812,4182,
#Partially deleted in new
chr19	35748784	35752240	chr19:35748784-35752240	0	+	35752183	35752240	789624	2	226,65,	0,3391,
#Deleted in new
chr19	35752912	35754515	chr19:35752912-35754515	0	+	35752912	35754474	789624	5	87,107,141,74,123,	0,174,1104,1333,1480,
#Deleted in new
chr19	35753839	35754518	chr19:35753839-35754518	0	+	35753839	35753839	8553170	2	318,273,	0,406,
#Deleted in new
chr19	35754565	35755490	chr19:35754565-35755490	3	+	35754565	35754565	8553170	2	306,354,	0,571,
#Deleted in new
chr19	35754568	35757029	chr19:35754568-35757029	3	-	35755521	35757008	0	3	1115,123,219,	0,1203,2242,
#Deleted in new
chr19	35755382	35757009	chr19:35755382-35757009	1	-	35755678	35757008	789624	2	512,199,	0,1428,
#Deleted in new
chr19	35755638	35758079	chr19:35755638-35758079	0	-	35755638	35757008	789624	4	45,123,223,172,	0,133,1172,2269,
#Partially deleted in new
chr19	35758142	35762330	chr19:35758142-35762330	0	+	35759935	35762330	789624	5	84,89,203,128,75,	0,1239,1646,3876,4113,
#Partially deleted in new
chr19	35758152	35769188	chr19:35758152-35769188	3	+	35758215	35768545	789624	11	74,97,203,128,104,83,143,188,262,82,785,	0,1221,1636,3866,4100,6701,6881,8615,9651,10002,10251,
#Partially deleted in new
chr19	35758155	35765176	chr19:35758155-35765176	0	+	35758215	35765176	789624	7	71,97,203,128,101,83,143,	0,1218,1633,3863,4100,6698,6878,
#Partially deleted in new
chr19	35758168	35767356	chr19:35758168-35767356	0	+	35758168	35758168	8553170	3	58,97,264,	0,1205,8924,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	35758178	35763045	chr19:35758178-35763045	1	+	35758215	35762398	789624	5	48,97,203,128,790,	0,1195,1610,3840,4077,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	35758183	35769864	chr19:35758183-35769864	0	+	35758215	35767009	789624	10	43,97,203,128,101,83,110,1298,82,1461,	0,1190,1605,3835,4072,6670,6883,8584,9971,10220,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	35758193	35762563	chr19:35758193-35762563	1	+	35758215	35762398	789624	5	33,97,203,128,311,	0,1180,1595,3825,4059,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	35758197	35762745	chr19:35758197-35762745	1	+	35758215	35762398	789624	3	29,128,493,	0,3821,4055,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	35758198	35763028	chr19:35758198-35763028	0	+	35758198	35758198	8553170	3	1793,128,776,	0,3820,4054,
#Partially deleted in new
chr19	35759286	35762352	chr19:35759286-35762352	0	+	35759935	35762352	789624	4	184,203,128,97,	0,502,2732,2969,
#Partially deleted in new
chr19	35759387	35762431	chr19:35759387-35762431	0	+	35759387	35762093	789624	3	83,128,176,	0,2631,2868,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	35759444	35765100	chr19:35759444-35765100	0	+	35759444	35762398	789624	6	26,203,128,225,83,67,	0,344,2574,2808,5409,5589,
#Partially deleted in new
chr19	35759884	35762372	chr19:35759884-35762372	0	+	35759884	35762184	789624	2	107,354,	0,2134,
#Partially deleted in new
chr19	35765101	35767454	chr19:35765101-35767454	0	+	35765101	35765101	8553170	3	75,188,383,	0,1666,1970,
#Partially deleted in new
chr19	35766767	35768545	chr19:35766767-35768545	0	+	35766767	35768545	789624	4	188,994,82,142,	0,304,1387,1636,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	35768201	35771028	chr19:35768201-35771028	0	+	35768201	35768201	8553170	3	368,489,217,	0,563,2610,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35768409	35769335	chr19:35768409-35769335	0	+	35768409	35768409	8553170	2	160,571,	0,355,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35769143	35771028	chr19:35769143-35771028	3	-	35769143	35769143	8553170	2	149,278,	0,1607,
#Partially deleted in new
chr19	35774531	35778549	chr19:35774531-35778549	0	+	35774531	35774531	8553170	5	285,98,85,81,86,	0,3113,3292,3748,3932,
#Partially deleted in new
chr19	35775514	35788822	chr19:35775514-35788822	1	+	35779031	35788429	789624	21	150,85,81,138,93,123,78,67,60,153,103,145,83,108,146,154,146,75,660,392,1179,	0,2309,2765,2949,3517,4696,4906,5067,5242,5405,5635,6858,7082,7247,8657,9438,9674,9894,10898,11653,12129,
#Partially deleted in new
chr19	35775542	35780214	chr19:35775542-35780214	0	+	35775658	35778681	789624	7	122,98,85,81,45,93,4,	0,2102,2281,2737,3112,3489,4668,
#Partially deleted in new
chr19	35775574	35788822	chr19:35775574-35788822	3	+	35775658	35788429	789624	21	90,98,85,81,138,93,123,78,67,60,153,103,145,83,108,146,154,146,75,177,1655,	0,2070,2249,2705,2889,3457,4636,4846,5007,5182,5345,5575,6798,7022,7187,8597,9378,9614,9834,11321,11593,
#Partially deleted in new
chr19	35775601	35788670	chr19:35775601-35788670	1	+	35775658	35788429	789624	21	63,98,85,81,138,93,123,78,67,60,153,103,145,83,108,146,154,146,75,247,299,	0,2043,2222,2678,2862,3430,4609,4819,4980,5155,5318,5548,6771,6995,7160,8570,9351,9587,9807,10811,12770,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	35777584	35779991	chr19:35777584-35779991	0	+	35777584	35777584	8553170	6	158,85,81,138,139,140,	0,239,695,879,1447,2267,
#Partially deleted in new
chr19	35781169	35784393	chr19:35781169-35784393	0	+	35781169	35781169	8553170	5	83,145,83,108,222,	0,1203,1427,1592,3002,
#Partially deleted in new
chr19	35782372	35788799	chr19:35782372-35788799	0	+	35782372	35788782	789624	10	145,83,108,146,154,146,75,660,392,95,	0,224,389,1799,2580,2816,3036,4040,4795,6332,
#Partially deleted in new
chr19	35782472	35784537	chr19:35782472-35784537	0	+	35782472	35782472	8553170	5	45,83,108,146,43,	0,124,289,1699,2022,
#Deleted in new
chr19	35782624	35782912	chr19:35782624-35782912	0	+	35782624	35782624	8553170	2	55,151,	0,137,
#Partially deleted in new
chr19	35782640	35788822	chr19:35782640-35788822	0	+	35782640	35788429	789624	8	39,108,146,154,146,75,660,1655,	0,121,1531,2312,2548,2768,3772,4527,
#Deleted in new
chr19	35784831	35786598	chr19:35784831-35786598	0	+	35784831	35784831	8553170	4	275,146,75,186,	0,357,577,1581,
#Deleted in new
chr19	35784906	35786750	chr19:35784906-35786750	0	+	35784906	35784906	8553170	3	200,75,338,	0,502,1506,
#Partially deleted in new
chr19	35785696	35797871	chr19:35785696-35797871	7	-	35785696	35785696	16724991	10	925,84,161,142,88,158,122,93,155,72,	0,3440,3710,4090,4321,4890,5320,6063,6591,12103,
#Partially deleted in new
chr19	35788873	35796907	chr19:35788873-35796907	5	-	35788873	35788873	16724991	11	201,205,158,337,93,116,61,155,156,115,118,	0,1436,1713,2143,2886,3075,3272,3414,3645,4199,7916,
#Deleted in new
chr19	35788873	35792674	chr19:35788873-35792674	4	-	35788873	35788873	16724991	9	1203,205,158,337,93,116,61,155,156,	0,1436,1713,2143,2886,3075,3272,3414,3645,
#Partially deleted in new
chr19	35788875	35797885	chr19:35788875-35797885	4	-	35788875	35788875	16724991	8	199,50,522,88,231,836,155,86,	0,295,531,1142,1711,2141,3412,8924,
#Partially deleted in new
chr19	35789715	35797902	chr19:35789715-35797902	5	-	35789715	35789715	16724991	6	213,88,158,93,155,103,	0,302,871,2044,2572,8084,
#Partially deleted in new
chr19	35791102	35797838	chr19:35791102-35797838	4	-	35791102	35791102	16724991	3	750,55,39,	0,1285,6697,
#Partially deleted in new
chr19	35791966	35797875	chr19:35791966-35797875	4	-	35791966	35791966	16724991	2	476,76,	0,5833,
#Partially deleted in new
chr19	35799987	35802470	chr19:35799987-35802470	0	-	35799987	35799987	8553170	2	235,280,	0,2203,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	35799989	35813299	chr19:35799989-35813299	3	-	35800037	35813281	789624	11	233,86,111,167,156,81,87,139,197,263,157,	0,2201,2978,6440,6685,7051,11972,12144,12370,12642,13153,
#Partially deleted in new
chr19	35799989	35812870	chr19:35799989-35812870	0	-	35799989	35799989	8553170	6	233,86,111,692,595,239,	0,2201,2978,6440,11972,12642,
#Partially deleted in new
chr19	35799989	35806730	chr19:35799989-35806730	0	-	35800197	35806730	789624	4	233,111,167,56,	0,2978,6440,6685,
#Partially deleted in new
chr19	35801792	35806446	chr19:35801792-35806446	0	-	35802182	35806446	789624	3	484,111,17,	0,1175,4637,
#Deleted in new
chr19	35811994	35812882	chr19:35811994-35812882	0	-	35811994	35811994	8553170	3	54,423,251,	0,139,637,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr19	35825963	35851837	chr19:35825963-35851837	3	-	35826513	35851837	0	29	682,113,94,76,25,120,57,182,112,152,157,172,122,141,141,173,130,187,125,145,158,172,128,104,82,129,123,216,58,	0,4880,5089,5332,5512,5679,9741,13273,13532,15751,16160,16415,17508,18139,18355,19404,19705,20044,22077,22289,22673,23012,23272,23586,24400,24997,25298,25493,25816,
#Partially deleted in new
chr19	35826379	35851838	chr19:35826379-35851838	1	-	35826513	35851837	0	28	266,113,94,76,25,57,182,112,152,157,172,122,141,141,173,130,187,125,145,158,172,128,104,82,129,123,216,59,	0,4464,4673,4916,5096,9325,12857,13116,15335,15744,15999,17092,17723,17939,18988,19289,19628,21661,21873,22257,22596,22856,23170,23984,24581,24882,25077,25400,
#Partially deleted in new
chr19	35843497	35845510	chr19:35843497-35845510	0	-	35843497	35843497	8553170	3	746,141,112,	0,821,1901,
#Deleted in new
chr19	35847926	35848994	chr19:35847926-35848994	0	-	35847926	35847926	8553170	4	239,145,158,19,	0,326,710,1049,
#Partially deleted in new
chr19	35851650	35869287	chr19:35851650-35869287	0	-	35851650	35851650	8553170	4	22,107,256,196,	0,14836,16224,17441,
#Partially deleted in new
chr19	35855860	35859531	chr19:35855860-35859531	0	+	35857119	35859531	789624	7	105,19,131,150,150,161,51,	0,1076,1189,1484,2547,2843,3620,
#Partially deleted in new
chr19	35856586	35866500	chr19:35856586-35866500	1	+	35857119	35866492	789624	14	594,150,150,161,151,106,149,128,133,101,220,110,66,344,	0,758,1821,2117,2894,3710,3932,4322,4535,4954,5218,6340,8061,9570,
#Partially deleted in new
chr19	35856909	35866589	chr19:35856909-35866589	1	+	35857119	35866536	789624	15	271,150,161,151,106,149,128,133,101,220,105,110,66,39,125,	0,1498,1794,2571,3387,3609,3999,4212,4631,4895,5583,6017,7738,9247,9555,
#Partially deleted in new
chr19	35856921	35867109	chr19:35856921-35867109	3	+	35857119	35866492	789624	15	259,150,150,161,151,106,149,128,133,101,220,105,110,66,953,	0,423,1486,1782,2559,3375,3597,3987,4200,4619,4883,5571,6005,7726,9235,
#Partially deleted in new
chr19	35857105	35866589	chr19:35857105-35866589	1	+	35857119	35866536	789624	16	75,150,150,161,151,106,149,128,133,101,220,105,110,66,39,125,	0,239,1302,1598,2375,3191,3413,3803,4016,4435,4699,5387,5821,7542,9051,9359,
#Partially deleted in new
chr19	35867898	35879526	chr19:35867898-35879526	1	+	35868243	35879441	789624	17	375,144,133,113,134,179,131,75,159,129,100,108,24,71,63,144,184,	0,1768,2997,3338,3713,3959,4584,5740,6605,6842,8618,9819,10186,10685,10991,11175,11444,
#Partially deleted in new
chr19	35868444	35879788	chr19:35868444-35879788	3	+	35868636	35879441	789624	17	339,144,133,113,134,179,131,75,159,129,100,108,27,71,63,144,446,	0,1222,2451,2792,3167,3413,4038,5194,6059,6296,8072,9273,9637,10139,10445,10629,10898,
#Partially deleted in new
chr19	35868562	35879788	chr19:35868562-35879788	0	+	35868636	35871251	789624	17	221,62,133,113,134,179,131,75,159,129,100,108,27,71,63,144,446,	0,1186,2333,2674,3049,3295,3920,5076,5941,6178,7954,9155,9519,10021,10327,10511,10780,
#Partially deleted in new
chr19	35869472	35879493	chr19:35869472-35879493	1	+	35869537	35879441	789624	16	338,133,113,134,179,131,75,159,129,100,108,24,71,63,144,151,	0,1423,1764,2139,2385,3010,4166,5031,5268,7044,8245,8612,9111,9417,9601,9870,
#Partially deleted in new
chr19	35870183	35871996	chr19:35870183-35871996	0	+	35870895	35871996	789624	5	67,133,113,134,139,	0,712,1053,1428,1674,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	35870453	35874620	chr19:35870453-35874620	0	+	35870895	35874620	789624	7	575,113,134,179,131,75,117,	0,783,1158,1404,2029,3185,4050,
#Partially deleted in new
chr19	35873645	35879174	chr19:35873645-35879174	0	+	35873645	35879174	789624	8	68,129,100,108,24,71,63,101,	0,1095,2871,4072,4439,4938,5244,5428,
#Partially deleted in new
chr19	35874507	35879751	chr19:35874507-35879751	0	+	35874507	35879441	789624	8	155,129,100,108,71,63,144,409,	0,233,2009,3210,4076,4382,4566,4835,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	35878524	35879190	chr19:35878524-35879190	0	+	35878524	35878524	8553170	3	130,63,117,	0,365,549,
#Deleted in new
chr19	35879226	35879791	chr19:35879226-35879791	0	+	35879226	35879226	8553170	2	14,449,	0,116,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	35881889	35882153	chr19:35881889-35882153	3	+	35881889	35881889	8553170	1	264,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	35887652	35896259	chr19:35887652-35896259	0	-	35890690	35896259	789624	6	960,165,117,119,149,42,	0,2237,2721,2925,8327,8565,
#Partially deleted in new
chr19	35888240	35900650	chr19:35888240-35900650	3	-	35888558	35897656	789624	12	372,165,117,149,52,147,106,146,206,61,104,209,	0,1649,2133,7739,7977,8151,8485,8672,9410,10231,10478,12201,
#Partially deleted in new
chr19	35888240	35902303	chr19:35888240-35902303	1	-	35888558	35902283	789624	12	372,165,117,149,52,147,106,146,206,61,104,111,	0,1649,2133,7739,7977,8151,8485,8672,9410,10231,10478,13952,
#Partially deleted in new
chr19	35888240	35900650	chr19:35888240-35900650	1	-	35888558	35900502	789624	12	372,165,117,149,52,147,106,146,206,61,104,209,	0,1649,2133,7739,7977,8151,8485,8672,9410,10231,10478,12201,
#Partially deleted in new
chr19	35890445	35900532	chr19:35890445-35900532	0	-	35890445	35890445	8553170	7	45,559,333,206,61,104,91,	0,5534,6280,7205,8026,8273,9996,
#Partially deleted in new
chr19	35895978	35897667	chr19:35895978-35897667	0	-	35895978	35895978	8553170	4	560,106,146,17,	0,747,934,1672,
#Deleted in new
chr19	35896120	35897058	chr19:35896120-35897058	0	-	35896120	35896120	8553170	2	418,333,	0,605,
#Partially deleted in new
chr19	35896272	35900521	chr19:35896272-35900521	0	-	35896272	35896272	8553170	5	266,333,61,104,80,	0,453,2199,2446,4169,
#Partially deleted in new
chr19	35896391	35900662	chr19:35896391-35900662	0	-	35896391	35900502	789624	7	147,106,191,206,61,104,221,	0,334,521,1259,2080,2327,4050,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	35897488	35900548	chr19:35897488-35900548	0	-	35897488	35897488	8553170	4	350,61,104,107,	0,983,1230,2953,
#Partially deleted in new
chr19	35897774	35899740	chr19:35897774-35899740	0	-	35897774	35897774	8553170	4	82,61,104,34,	0,697,944,1932,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	35901560	35903855	chr19:35901560-35903855	3	-	35901560	35901560	8553170	1	2295,	0,
#Partially deleted in new
chr19	35902479	35904377	chr19:35902479-35904377	3	+	35902593	35904160	789624	4	157,66,132,258,	0,871,1292,1640,
#Partially deleted in new
chr19	35902537	35904270	chr19:35902537-35904270	1	+	35902593	35904160	789624	4	99,66,132,148,	0,813,1234,1585,
#Partially deleted in new
chr19	35904400	35908295	chr19:35904400-35908295	1	-	35904568	35908228	789624	4	234,44,135,128,	0,2817,3045,3767,
#Partially deleted in new
chr19	35904400	35908295	chr19:35904400-35908295	0	-	35907559	35908228	789624	5	234,47,135,33,121,	0,2817,3045,3329,3774,
#Partially deleted in new
chr19	35904402	35908275	chr19:35904402-35908275	1	-	35904568	35908228	0	4	232,47,135,108,	0,2815,3043,3765,
#Partially deleted in new
chr19	35904402	35908247	chr19:35904402-35908247	1	-	35904568	35908228	789624	5	232,140,135,33,80,	0,2815,3043,3327,3765,
#Partially deleted in new
chr19	35904409	35908295	chr19:35904409-35908295	3	-	35904568	35908228	0	5	225,47,135,33,128,	0,2808,3036,3320,3758,
#Partially deleted in new
chr19	35904445	35908295	chr19:35904445-35908295	0	-	35907559	35908228	789624	5	189,44,135,33,121,	0,2772,3000,3284,3729,
#Partially deleted in new
chr19	35904460	35908223	chr19:35904460-35908223	0	-	35904460	35904460	8553170	4	174,47,317,56,	0,2757,2985,3707,
#Partially deleted in new
chr19	35904559	35908295	chr19:35904559-35908295	1	-	35904568	35908228	0	5	75,44,135,33,128,	0,2658,2886,3170,3608,
#Deleted in new
chr19	35907293	35908295	chr19:35907293-35908295	0	-	35907293	35907293	8553170	3	287,33,128,	0,436,874,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35935357	35936792	chr19:35935357-35936792	0	+	35935357	35935357	8553170	2	425,133,	0,1302,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	35935549	35945767	chr19:35935549-35945767	3	+	35939425	35945019	789624	4	233,805,1431,1220,	0,1201,3860,8998,
#Partially deleted in new
chr19	35935692	35937026	chr19:35935692-35937026	0	+	35935692	35935692	8553170	2	90,439,	0,895,
#Partially deleted in new
chr19	35937119	35945193	chr19:35937119-35945193	1	+	35939425	35945019	789624	3	436,1431,646,	0,2290,7428,
#Partially deleted in new
chr19	35947114	35959192	chr19:35947114-35959192	3	+	35947114	35947114	8553170	4	132,112,62,194,	0,10138,11099,11884,
#Deleted in new
chr19	35957120	35957382	chr19:35957120-35957382	7	-	35957120	35957120	16724991	1	262,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	35960511	35964063	chr19:35960511-35964063	3	+	35960511	35960511	8553170	2	83,517,	0,3035,
#Deleted in new
chr19	35995198	35996315	chr19:35995198-35996315	3	+	35995274	35995622	789624	1	1117,	0,
#Partially deleted in new
chr19	36003298	36008793	chr19:36003298-36008793	3	-	36003336	36008681	789624	8	222,59,105,249,195,144,151,240,	0,314,2034,3124,3451,3826,4918,5255,
#Partially deleted in new
chr19	36003306	36008610	chr19:36003306-36008610	0	-	36003306	36003306	8553170	3	214,105,394,	0,2026,4910,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	36003307	36008793	chr19:36003307-36008793	0	-	36003307	36003307	8553170	7	213,59,1339,195,144,151,240,	0,305,2025,3442,3817,4909,5246,
#Partially deleted in new
chr19	36003309	36008782	chr19:36003309-36008782	1	-	36003336	36008681	789624	6	211,59,105,249,151,229,	0,303,2023,3113,4907,5244,
#Partially deleted in new
chr19	36003309	36008619	chr19:36003309-36008619	0	-	36005370	36008619	789624	3	211,105,66,	0,2023,5244,
#Partially deleted in new
chr19	36003309	36008793	chr19:36003309-36008793	0	-	36003309	36008681	789624	8	211,59,105,70,195,144,151,240,	0,303,2023,3292,3440,3815,4907,5244,
#Partially deleted in new
chr19	36003309	36008644	chr19:36003309-36008644	0	-	36003309	36008644	789624	3	211,151,91,	0,4907,5244,
#Partially deleted in new
chr19	36003309	36008767	chr19:36003309-36008767	1	-	36003336	36008681	789624	8	211,59,105,249,195,144,151,214,	0,303,2023,3113,3440,3815,4907,5244,
#Partially deleted in new
chr19	36008637	36014235	chr19:36008637-36014235	3	-	36008637	36008637	8553170	7	54,295,511,61,69,79,61,	0,621,1929,2766,4383,4706,5537,
#Partially deleted in new
chr19	36009119	36014222	chr19:36009119-36014222	0	-	36009119	36009119	8553170	4	434,79,69,48,	0,1447,3901,5055,
#Partially deleted in new
chr19	36009120	36013422	chr19:36009120-36013422	0	-	36013060	36013422	789624	5	433,117,61,69,113,	0,1446,2283,3900,4189,
#Partially deleted in new
chr19	36009120	36014183	chr19:36009120-36014183	0	-	36010922	36014183	789624	6	433,117,172,61,69,9,	0,1446,1773,2283,3900,5054,
#Partially deleted in new
chr19	36009120	36014208	chr19:36009120-36014208	0	-	36010922	36014208	789624	7	433,117,184,61,69,79,34,	0,1446,1773,2283,3900,4223,5054,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	36009121	36014212	chr19:36009121-36014212	0	-	36009121	36009121	8553170	3	432,2856,38,	0,1445,5053,
#Partially deleted in new
chr19	36009123	36014239	chr19:36009123-36014239	3	-	36009289	36014233	789624	7	430,117,152,61,69,79,65,	0,1443,1770,2280,3897,4220,5051,
#Partially deleted in new
chr19	36009123	36014237	chr19:36009123-36014237	1	-	36010579	36013397	789624	6	430,79,152,61,79,724,	0,1443,1770,2280,4220,4390,
#Partially deleted in new
chr19	36009174	36014239	chr19:36009174-36014239	1	-	36010579	36013397	789624	8	379,79,152,61,69,79,75,65,	0,1392,1719,2229,3846,4169,4339,5000,
#Partially deleted in new
chr19	36009204	36014227	chr19:36009204-36014227	1	-	36009289	36013397	789624	8	349,117,152,61,69,79,75,53,	0,1362,1689,2199,3816,4139,4309,4970,
#Partially deleted in new
chr19	36009281	36014190	chr19:36009281-36014190	0	-	36011011	36014190	789624	6	272,117,152,89,79,16,	0,1285,1612,3719,4062,4893,
#Partially deleted in new
chr19	36009460	36013303	chr19:36009460-36013303	0	-	36009460	36009460	8553170	5	93,79,184,61,283,	0,1106,1433,1943,3560,
#Partially deleted in new
chr19	36010289	36014213	chr19:36010289-36014213	0	-	36010289	36010289	8553170	5	756,61,69,79,39,	0,1114,2731,3054,3885,
#Partially deleted in new
chr19	36010543	36013588	chr19:36010543-36013588	0	-	36010543	36010543	8553170	5	534,61,69,79,75,	0,860,2477,2800,2970,
#Partially deleted in new
chr19	36010635	36014202	chr19:36010635-36014202	0	-	36013060	36014202	789624	6	148,152,61,69,95,28,	0,258,768,2385,2692,3539,
#Partially deleted in new
chr19	36010737	36014213	chr19:36010737-36014213	0	-	36010737	36010737	8553170	5	308,61,69,79,39,	0,666,2283,2606,3437,
#Partially deleted in new
chr19	36010737	36014235	chr19:36010737-36014235	0	-	36010737	36010737	8553170	5	340,61,69,79,61,	0,666,2283,2606,3437,
#Partially deleted in new
chr19	36011037	36014199	chr19:36011037-36014199	0	-	36011037	36011037	8553170	4	40,61,402,25,	0,366,1983,3137,
#Partially deleted in new
chr19	36011179	36014213	chr19:36011179-36014213	0	-	36011179	36011179	8553170	4	285,69,79,39,	0,1841,2164,2995,
#Deleted in new
chr19	36012542	36014218	chr19:36012542-36014218	0	-	36012542	36012542	8553170	3	547,79,44,	0,801,1632,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	36014507	36045972	chr19:36014507-36045972	3	+	36014507	36014507	8553170	4	79,149,151,264,	0,2304,4726,31201,
#Partially deleted in new
chr19	36014659	36032893	chr19:36014659-36032893	3	-	36016157	36032357	0	14	1553,73,65,124,144,129,136,237,119,162,94,140,224,170,	0,2247,2726,2995,3188,4238,4511,9736,11487,11926,12292,12472,17532,18064,
#Partially deleted in new
chr19	36016035	36032671	chr19:36016035-36032671	1	-	36016157	36032357	0	13	177,73,65,124,144,129,136,237,119,162,94,140,480,	0,871,1350,1619,1812,2862,3135,8360,10111,10550,10916,11096,16156,
#Partially deleted in new
chr19	36024343	36026225	chr19:36024343-36026225	0	-	36024343	36024343	8553170	2	289,79,	0,1803,
#Partially deleted in new
chr19	36026951	36033343	chr19:36026951-36033343	0	-	36026951	36032357	789624	5	94,140,224,43,48,	0,180,5240,5772,6344,
#Partially deleted in new
chr19	36026951	36032871	chr19:36026951-36032871	0	-	36026951	36032357	789624	4	94,140,322,148,	0,180,5240,5772,
#Deleted in new
chr19	36032145	36032886	chr19:36032145-36032886	0	-	36032145	36032145	8553170	2	270,163,	0,578,
#Partially deleted in new
chr19	36034984	36054762	chr19:36034984-36054762	3	-	36035439	36054217	789624	4	608,396,193,628,	0,4338,4959,19150,
#Partially deleted in new
chr19	36035147	36054377	chr19:36035147-36054377	0	-	36039603	36054217	789624	3	445,396,243,	0,4175,18987,
#Partially deleted in new
chr19	36039322	36054401	chr19:36039322-36054401	0	-	36040079	36054217	789624	3	396,193,253,	0,621,14826,
#Partially deleted in new
chr19	36039960	36054739	chr19:36039960-36054739	0	-	36039960	36039960	8553170	2	176,391,	0,14388,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	36054880	36074304	chr19:36054880-36074304	0	+	36054880	36054880	8553170	10	268,92,63,58,171,138,183,161,190,656,	0,3899,5087,11077,11376,12425,12947,16675,18461,18768,
#Partially deleted in new
chr19	36054936	36105103	chr19:36054936-36105103	1	+	36054971	36105028	789624	32	212,92,63,58,171,138,183,161,190,138,179,92,126,68,122,76,112,64,123,134,53,219,128,104,111,138,115,127,52,639,158,336,	0,3843,5031,11021,11320,12369,12891,16619,18405,26496,28126,29716,31750,34101,34248,35508,36263,36465,37752,39094,42090,44462,45811,46277,46727,47077,47800,48011,48219,48406,49581,49831,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr19	36054962	36105106	chr19:36054962-36105106	0	+	36054971	36081874	789624	30	186,92,63,58,171,138,183,161,190,138,142,179,92,126,68,122,76,112,64,123,134,53,219,128,1638,127,52,639,158,339,	0,3817,5005,10995,11294,12343,12865,16593,18379,26470,26831,28100,29690,31724,34075,34222,35482,36237,36439,37726,39068,42064,44436,45785,46251,47985,48193,48380,49555,49805,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	36054962	36062649	chr19:36054962-36062649	0	+	36054962	36054962	8553170	3	186,92,2682,	0,3817,5005,
#Partially deleted in new
chr19	36054971	36105103	chr19:36054971-36105103	3	+	36054971	36105028	789624	32	177,92,63,58,171,138,183,161,190,138,179,92,126,68,122,76,112,64,123,134,53,219,128,104,111,138,100,127,52,639,158,336,	0,3808,4996,10986,11285,12334,12856,16584,18370,26461,28091,29681,31715,34066,34213,35473,36228,36430,37717,39059,42055,44427,45776,46242,46692,47042,47780,47976,48184,48371,49546,49796,
#Partially deleted in new
chr19	36054989	36071562	chr19:36054989-36071562	0	+	36054989	36071562	789624	9	159,92,84,63,58,171,138,183,7,	0,3790,3987,4978,10968,11267,12316,12838,16566,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	36070238	36071070	chr19:36070238-36071070	3	+	36070238	36070238	8553170	1	832,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	36071605	36075417	chr19:36071605-36075417	0	+	36071605	36071605	8553170	3	111,190,363,	0,1736,3449,
#Partially deleted in new
chr19	36111150	36113711	chr19:36111150-36113711	3	+	36111202	36113661	789624	4	146,65,205,259,	0,218,1609,2302,
#Partially deleted in new
chr19	36111202	36113711	chr19:36111202-36113711	1	+	36111202	36113661	789624	3	231,205,259,	0,1557,2250,
#Partially deleted in new
chr19	36113709	36115346	chr19:36113709-36115346	3	-	36113754	36114856	0	6	108,52,75,74,55,549,	0,305,467,629,949,1088,
#Partially deleted in new
chr19	36113709	36114891	chr19:36113709-36114891	0	-	36113709	36113709	8553170	5	108,52,75,74,233,	0,305,467,629,949,
#Partially deleted in new
chr19	36113713	36114860	chr19:36113713-36114860	0	-	36114243	36114856	789624	5	104,52,75,74,63,	0,301,463,625,1084,
#Partially deleted in new
chr19	36113715	36114906	chr19:36113715-36114906	0	-	36114172	36114856	789624	6	102,52,101,74,55,109,	0,299,435,623,943,1082,
#Partially deleted in new
chr19	36113722	36115193	chr19:36113722-36115193	0	-	36113722	36113722	8553170	5	95,52,75,375,396,	0,292,454,616,1075,
#Partially deleted in new
chr19	36113723	36115213	chr19:36113723-36115213	0	-	36114243	36114856	789624	6	94,52,75,74,55,394,	0,291,453,615,935,1096,
#Partially deleted in new
chr19	36114190	36114859	chr19:36114190-36114859	0	-	36114190	36114190	8553170	2	61,521,	0,148,
#Partially deleted in new
chr19	36114288	36115551	chr19:36114288-36115551	0	+	36114288	36114288	8553170	2	106,499,	0,764,
#Partially deleted in new
chr19	36114361	36115146	chr19:36114361-36115146	3	+	36114361	36114361	8553170	1	785,	0,
#Partially deleted in new
chr19	36114985	36125945	chr19:36114985-36125945	3	+	36115560	36125782	789624	6	689,144,97,192,73,278,	0,1055,5724,6541,10465,10682,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	36115482	36116752	chr19:36115482-36116752	0	+	36115482	36115482	8553170	2	192,712,	0,558,
#Partially deleted in new
chr19	36115483	36121885	chr19:36115483-36121885	0	+	36115483	36115483	8553170	4	191,144,97,359,	0,557,5226,6043,
#Partially deleted in new
chr19	36115518	36125778	chr19:36115518-36125778	1	+	36115560	36125672	789624	6	156,144,97,143,73,111,	0,522,5191,6008,9932,10149,
#Partially deleted in new
chr19	36115812	36125709	chr19:36115812-36125709	0	+	36116079	36125709	789624	5	372,97,192,73,42,	0,4897,5714,9638,9855,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	36115821	36120806	chr19:36115821-36120806	0	+	36116079	36118560	789624	3	363,137,97,	0,2706,4888,
#Partially deleted in new
chr19	36115827	36121843	chr19:36115827-36121843	0	+	36115827	36115827	8553170	4	101,144,97,317,	0,213,4882,5699,
#Partially deleted in new
chr19	36115837	36125945	chr19:36115837-36125945	1	+	36116079	36125782	789624	6	91,144,97,192,73,278,	0,203,4872,5689,9613,9830,
#Partially deleted in new
chr19	36116071	36125947	chr19:36116071-36125947	1	+	36116079	36125672	789624	3	113,73,280,	0,9379,9596,
#Partially deleted in new
chr19	36120481	36125733	chr19:36120481-36125733	0	+	36120481	36120481	8553170	4	325,192,73,66,	0,1045,4969,5186,
#Partially deleted in new
chr19	36121894	36125945	chr19:36121894-36125945	0	+	36121894	36121894	8553170	3	279,73,278,	0,3556,3773,
#Partially deleted in new
chr19	36139574	36150352	chr19:36139574-36150352	3	+	36141011	36149839	0	11	583,224,34,90,58,65,69,79,117,59,540,	0,1422,2725,3077,3334,3489,6231,6401,6621,10003,10238,
#Partially deleted in new
chr19	36139952	36149912	chr19:36139952-36149912	1	+	36141011	36149839	789624	6	205,79,18,117,59,100,	0,1044,6084,6243,9625,9860,
#Partially deleted in new
chr19	36140014	36150353	chr19:36140014-36150353	1	+	36141011	36149839	789624	11	143,224,34,90,58,65,99,79,117,59,541,	0,982,2285,2637,2894,3049,5761,5961,6181,9563,9798,
#Partially deleted in new
chr19	36140014	36150353	chr19:36140014-36150353	1	+	36141011	36149839	789624	10	143,224,34,58,65,69,79,117,59,541,	0,982,2285,2894,3049,5791,5961,6181,9563,9798,
#Partially deleted in new
chr19	36140107	36150349	chr19:36140107-36150349	1	+	36141011	36149825	789624	10	50,224,34,90,58,65,69,79,117,772,	0,889,2192,2544,2801,2956,5698,5868,6088,9470,
#Deleted in new
chr19	36140109	36142307	chr19:36140109-36142307	0	+	36141011	36142307	789624	4	48,154,221,8,	0,248,890,2190,
#Partially deleted in new
chr19	36140122	36150001	chr19:36140122-36150001	1	+	36141011	36149839	789624	10	35,221,34,58,65,69,79,117,59,189,	0,877,2177,2786,2941,5683,5853,6073,9455,9690,
#Partially deleted in new
chr19	36140126	36150352	chr19:36140126-36150352	1	+	36141011	36149839	0	11	139,221,34,90,58,65,69,79,117,59,540,	0,873,2173,2525,2782,2937,5679,5849,6069,9451,9686,
#Partially deleted in new
chr19	36140607	36145840	chr19:36140607-36145840	0	+	36141011	36145840	789624	7	306,224,34,90,58,65,35,	0,389,1692,2044,2301,2456,5198,
#Partially deleted in new
chr19	36140967	36149993	chr19:36140967-36149993	1	+	36141011	36149839	789624	10	253,34,90,58,65,99,79,117,59,181,	0,1332,1684,1941,2096,4808,5008,5228,8610,8845,
#Partially deleted in new
chr19	36141011	36150353	chr19:36141011-36150353	1	+	36141011	36149839	789624	5	64,18,117,59,541,	0,5025,5184,8566,8801,
#Partially deleted in new
chr19	36141158	36150353	chr19:36141158-36150353	0	+	36141158	36150353	789624	9	62,34,90,58,65,69,79,95,40,	0,1141,1493,1750,1905,4647,4817,5037,9155,
#Partially deleted in new
chr19	36141178	36149866	chr19:36141178-36149866	0	+	36141178	36149839	789624	10	42,34,90,58,65,69,79,66,59,54,	0,1121,1473,1730,1885,4627,4797,5068,8399,8634,
#Partially deleted in new
chr19	36141189	36150349	chr19:36141189-36150349	0	+	36141189	36150110	789624	4	31,34,30,308,	0,1110,1462,8852,
#Partially deleted in new
chr19	36141302	36146228	chr19:36141302-36146228	0	+	36142911	36146228	789624	8	262,34,90,58,65,69,79,33,	0,997,1349,1606,1761,4503,4673,4893,
#Partially deleted in new
chr19	36141592	36146279	chr19:36141592-36146279	0	+	36141678	36146279	789624	8	91,34,90,58,65,69,79,84,	0,707,1059,1316,1471,4213,4383,4603,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	36145372	36149580	chr19:36145372-36149580	0	+	36145372	36145372	8553170	4	502,79,117,3,	0,603,823,4205,
#Deleted in new
chr19	36150921	36152869	chr19:36150921-36152869	3	-	36150981	36152407	789624	4	113,85,87,477,	0,540,747,1471,
#Deleted in new
chr19	36150921	36152025	chr19:36150921-36152025	1	-	36150981	36151480	789624	4	113,85,87,122,	0,540,747,982,
#Deleted in new
chr19	36150921	36152449	chr19:36150921-36152449	0	-	36150921	36150921	8553170	3	113,294,57,	0,540,1471,
#Deleted in new
chr19	36151012	36152436	chr19:36151012-36152436	0	-	36151012	36152407	789624	4	22,85,60,44,	0,449,683,1380,
#Deleted in new
chr19	36173405	36173853	chr19:36173405-36173853	7	-	36173405	36173405	16724991	1	448,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	36182059	36214673	chr19:36182059-36214673	1	-	36182465	36201985	789624	5	1674,96,127,74,52,	0,12173,12970,19917,32562,
#Partially deleted in new
chr19	36182293	36246257	chr19:36182293-36246257	1	-	36182465	36245530	789624	5	1440,96,127,74,782,	0,11939,12736,19683,63182,
#Partially deleted in new
chr19	36182293	36215081	chr19:36182293-36215081	3	-	36182465	36201985	789624	5	1440,96,127,74,194,	0,11939,12736,19683,32594,
#Partially deleted in new
chr19	36182991	36214873	chr19:36182991-36214873	0	-	36182991	36194269	789624	4	742,96,127,252,	0,11241,12038,31630,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	36194295	36213392	chr19:36194295-36213392	0	-	36194295	36201985	789624	6	33,127,74,96,112,141,	0,734,7681,9151,18723,18956,
#Partially deleted in new
chr19	36194624	36214655	chr19:36194624-36214655	0	-	36194624	36194624	8553170	2	532,34,	0,19997,
#Partially deleted in new
chr19	36194826	36214663	chr19:36194826-36214663	0	-	36194826	36194826	8553170	3	330,74,42,	0,7150,19795,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	36203346	36203459	chr19:36203346-36203459	3	-	36203346	36203346	8553170	1	113,	0,
#Partially deleted in new
chr19	36214601	36238771	chr19:36214601-36238771	3	+	36236440	36237319	789624	3	595,72,3113,	0,14146,21057,
#Partially deleted in new
chr19	36215095	36236059	chr19:36215095-36236059	0	+	36215095	36215095	8553170	3	60,72,401,	0,13652,20563,
#Partially deleted in new
chr19	36215105	36236060	chr19:36215105-36236060	0	+	36215105	36215105	8553170	3	91,72,402,	0,13642,20553,
#Partially deleted in new
chr19	36215132	36238774	chr19:36215132-36238774	1	+	36236440	36237319	789624	4	64,74,72,3116,	0,2989,13615,20526,
#Partially deleted in new
chr19	36228458	36235868	chr19:36228458-36235868	0	+	36228458	36228458	8553170	2	361,210,	0,7200,
#Partially deleted in new
chr19	36304579	36311792	chr19:36304579-36311792	1	+	36304579	36304579	8553170	3	233,394,170,	0,6415,7043,
#Partially deleted in new
chr19	36304620	36312668	chr19:36304620-36312668	3	+	36304620	36304620	8553170	3	192,170,147,	0,7002,7901,
#Partially deleted in new
chr19	36307197	36312660	chr19:36307197-36312660	1	+	36307197	36307197	8553170	3	130,170,139,	0,4425,5324,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	36310357	36312662	chr19:36310357-36312662	1	+	36310357	36310357	8553170	1	2305,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	36310357	36312661	chr19:36310357-36312661	0	+	36310357	36310357	8553170	1	2304,	0,
#Partially deleted in new
chr19	36311543	36312668	chr19:36311543-36312668	0	+	36311543	36311543	789624	2	249,147,	0,978,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	36313066	36331707	chr19:36313066-36331707	3	-	36313066	36313066	789624	6	846,114,58,38,240,261,	0,2890,8233,8926,17186,18380,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	36313066	36315737	chr19:36313066-36315737	0	-	36313066	36313066	8553170	1	2671,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	36315359	36330492	chr19:36315359-36330492	0	-	36315359	36315359	8553170	6	169,114,58,38,96,240,	0,597,5940,6633,6770,14893,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	36319715	36331718	chr19:36319715-36331718	1	-	36319715	36319715	789624	6	1045,58,38,96,240,272,	0,1584,2277,2414,10537,11731,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	36319750	36331708	chr19:36319750-36331708	1	-	36319750	36319750	8553170	6	1010,58,38,255,240,262,	0,1549,2242,2379,10502,11696,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	36324936	36331649	chr19:36324936-36331649	1	-	36324936	36324936	8553170	3	2289,240,203,	0,5316,6510,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	36334452	36379199	chr19:36334452-36379199	3	-	36340223	36367892	789624	5	7138,99,127,88,37,	0,25982,27659,33431,44710,
#Partially deleted in new
chr19	36360111	36367973	chr19:36360111-36367973	1	-	36360426	36367892	789624	3	425,127,90,	0,2000,7772,
#Deleted in new
chr19	36378027	36378832	chr19:36378027-36378832	3	+	36378027	36378027	8553170	2	173,393,	0,412,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	36379350	36380912	chr19:36379350-36380912	3	-	36379350	36379350	8553170	2	55,194,	0,1368,
#Partially deleted in new
chr19	36383119	36405623	chr19:36383119-36405623	0	-	36384331	36405623	789624	2	1316,44,	0,22460,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	36390349	36396067	chr19:36390349-36396067	0	-	36390349	36390349	8553170	1	5718,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	36391959	36418656	chr19:36391959-36418656	3	-	36392740	36409789	789624	5	2151,93,127,87,165,	0,13620,15927,17821,26532,
#Deleted in new
chr19	36421535	36422534	chr19:36421535-36422534	7	+	36421535	36421535	16724991	1	999,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	36445118	36489435	chr19:36445118-36489435	3	-	36448976	36476557	789624	5	4883,96,127,68,23,	0,27792,28213,31430,44294,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	36445118	36449555	chr19:36445118-36449555	0	-	36446038	36449555	789624	2	997,157,	0,4280,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	36447020	36489861	chr19:36447020-36489861	1	-	36448976	36449921	789624	3	2981,68,376,	0,29528,42465,
#Partially deleted in new
chr19	36447628	36489561	chr19:36447628-36489561	1	-	36448976	36476557	789624	5	2373,99,127,68,88,	0,25282,25703,28920,41845,
#Partially deleted in new
chr19	36447681	36489506	chr19:36447681-36489506	1	-	36448976	36476557	789624	5	2320,96,127,68,33,	0,25229,25650,28867,41792,
#Partially deleted in new
chr19	36449532	36489518	chr19:36449532-36489518	0	-	36449532	36476557	789624	5	469,96,127,68,33,	0,23378,23799,27016,39953,
#Partially deleted in new
chr19	36449763	36489537	chr19:36449763-36489537	0	-	36449763	36476557	789624	5	238,99,127,68,52,	0,23147,23568,26785,39722,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	36456459	36489902	chr19:36456459-36489902	0	-	36456459	36456459	8553170	3	90,68,429,	0,20089,33014,
#Partially deleted in new
chr19	36472990	36489519	chr19:36472990-36489519	0	-	36472990	36472990	8553170	3	468,68,34,	0,3558,16495,
#Partially deleted in new
chr19	36473140	36489561	chr19:36473140-36489561	0	-	36473140	36473140	8553170	3	318,68,88,	0,3408,16333,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	36476108	36489902	chr19:36476108-36489902	0	-	36476108	36476108	8553170	2	508,417,	0,13377,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	36489648	36491040	chr19:36489648-36491040	3	+	36489648	36489648	5263520	1	1392,	0,
#Deleted in new
chr19	36496915	36498159	chr19:36496915-36498159	7	-	36496915	36496915	16724991	1	1244,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	36510694	36528660	chr19:36510694-36528660	3	-	36513999	36515238	789624	3	5005,219,442,	0,14460,17524,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	36511027	36528268	chr19:36511027-36528268	1	-	36513999	36515238	789624	4	4672,114,219,50,	0,7002,14127,17191,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	36511778	36525299	chr19:36511778-36525299	1	-	36513999	36515238	789624	3	3921,108,145,	0,5507,13376,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	36511778	36525299	chr19:36511778-36525299	1	-	36513999	36515238	789624	2	3921,126,	0,13395,
#Partially deleted in new
chr19	36525090	36528265	chr19:36525090-36528265	0	-	36525090	36525090	8553170	2	283,47,	0,3128,
#Partially deleted in new
chr19	36528317	36535235	chr19:36528317-36535235	3	+	36528317	36528317	8553170	3	164,132,138,	0,6543,6780,
#Partially deleted in new
chr19	36534773	36547764	chr19:36534773-36547764	0	-	36534830	36547764	789624	2	188,207,	0,12784,
#Partially deleted in new
chr19	36543612	36547528	chr19:36543612-36547528	0	-	36543812	36547528	789624	3	216,64,139,	0,2257,3777,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	36543615	36573288	chr19:36543615-36573288	1	-	36546865	36548242	789624	6	4707,101,127,94,60,149,	0,8261,11054,12488,28717,29524,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	36544385	36573252	chr19:36544385-36573252	3	-	36546865	36572346	789624	5	3937,127,94,60,113,	0,10284,11718,27947,28754,
#Partially deleted in new
chr19	36548100	36605276	chr19:36548100-36605276	0	-	36548100	36554703	789624	4	222,127,87,151,	0,6569,41514,57025,
#Partially deleted in new
chr19	36548226	36605243	chr19:36548226-36605243	0	-	36548226	36572346	789624	6	96,127,94,60,87,118,	0,6443,7877,24106,41388,56899,
#Partially deleted in new
chr19	36548227	36605257	chr19:36548227-36605257	0	-	36548227	36556157	789624	5	95,127,94,87,132,	0,6442,7876,41387,56898,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	36573069	36594708	chr19:36573069-36594708	3	+	36573069	36573069	789624	5	456,80,86,144,267,	0,1751,20776,21086,21372,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	36573376	36577915	chr19:36573376-36577915	1	+	36573376	36573376	789624	3	149,80,775,	0,1444,3764,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	36573536	36594708	chr19:36573536-36594708	0	+	36573536	36573536	8553170	4	19,80,86,267,	0,1284,20309,20905,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	36577227	36594708	chr19:36577227-36594708	0	+	36577227	36577227	8553170	4	56,86,144,308,	0,16618,16928,17173,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	36580254	36605262	chr19:36580254-36605262	0	-	36580254	36580254	789624	3	2450,87,137,	0,9360,24871,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	36582397	36605243	chr19:36582397-36605243	0	-	36582397	36582397	8553170	4	307,56,87,118,	0,5004,7217,22728,
#Partially deleted in new
chr19	36604816	36627992	chr19:36604816-36627992	1	+	36610657	36627550	789624	4	630,71,93,1863,	0,2735,5833,21313,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	36605312	36608092	chr19:36605312-36608092	0	+	36605312	36605312	8553170	2	35,541,	0,2239,
#Partially deleted in new
chr19	36605312	36609993	chr19:36605312-36609993	0	+	36607613	36609993	789624	3	418,71,67,	0,2239,4614,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	36605318	36634113	chr19:36605318-36634113	3	+	36609914	36627550	789624	5	29,71,152,93,7984,	0,2233,4583,5331,20811,
#Partially deleted in new
chr19	36605327	36607811	chr19:36605327-36607811	0	+	36605327	36605327	8553170	2	403,260,	0,2224,
#Partially deleted in new
chr19	36605334	36628567	chr19:36605334-36628567	1	+	36607613	36627550	789624	5	13,71,127,93,2438,	0,2217,4592,5315,20795,
#Partially deleted in new
chr19	36608419	36628270	chr19:36608419-36628270	1	+	36609914	36627550	789624	3	1634,93,2138,	0,2230,17713,
#Partially deleted in new
chr19	36610497	36626596	chr19:36610497-36626596	0	+	36610657	36626596	789624	2	245,467,	0,15632,
#Deleted in new
chr19	36626773	36628842	chr19:36626773-36628842	1	+	36626773	36628842	789624	4	715,26,16,77,	0,1600,1687,1992,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	36628792	36630190	chr19:36628792-36630190	0	+	36628792	36628792	8553170	2	214,336,	0,1062,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	36637191	36666819	chr19:36637191-36666819	0	-	36656516	36664706	789624	6	2852,69,96,90,89,130,	0,6602,19256,21144,27506,29498,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	36637224	36637767	chr19:36637224-36637767	0	-	36637224	36637224	8553170	2	92,148,	0,395,
#Partially deleted in new
chr19	36637819	36639537	chr19:36637819-36639537	1	-	36637819	36639537	789624	2	20,754,	0,964,
#Partially deleted in new
chr19	36637988	36666837	chr19:36637988-36666837	3	-	36638652	36664706	789624	6	2055,69,96,127,89,148,	0,5805,18459,20310,26709,28701,
#Partially deleted in new
chr19	36638146	36666841	chr19:36638146-36666841	1	-	36638652	36664706	789624	5	1897,96,127,89,152,	0,18301,20152,26551,28543,
#Partially deleted in new
chr19	36638532	36640112	chr19:36638532-36640112	0	-	36638532	36638532	8553170	1	1580,	0,
#Partially deleted in new
chr19	36638630	36643607	chr19:36638630-36643607	0	-	36638630	36638630	8553170	2	1413,334,	0,4643,
#Partially deleted in new
chr19	36638652	36658563	chr19:36638652-36658563	1	-	36638652	36658563	789624	5	1391,69,96,127,9,	0,5141,17795,19646,19902,
#Partially deleted in new
chr19	36639654	36666828	chr19:36639654-36666828	0	-	36639654	36656484	789624	4	389,96,89,139,	0,16793,25043,27035,
#Partially deleted in new
chr19	36656447	36666823	chr19:36656447-36666823	0	-	36656447	36658416	789624	4	96,148,89,134,	0,1851,8250,10242,
#Partially deleted in new
chr19	36658091	36666838	chr19:36658091-36666838	0	-	36658091	36658091	8553170	3	334,89,149,	0,6606,8598,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	36668101	36669404	chr19:36668101-36669404	3	+	36668101	36668101	8553170	1	1303,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	36685439	36687449	chr19:36685439-36687449	3	-	36685439	36685439	789624	4	72,179,121,182,	0,397,1246,1828,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	36685464	36687410	chr19:36685464-36687410	1	-	36685464	36685464	789624	3	551,121,143,	0,1221,1803,
#Deleted in new
chr19	36686426	36687437	chr19:36686426-36687437	0	-	36686426	36686426	8553170	2	380,170,	0,841,
#Partially deleted in new
chr19	36687611	36712732	chr19:36687611-36712732	0	+	36687611	36687611	8553170	4	23,97,75,347,	0,1789,7190,24774,
#Partially deleted in new
chr19	36687627	36721327	chr19:36687627-36721327	3	+	36694867	36720668	789624	6	59,97,75,127,87,2380,	0,1773,7174,24758,25153,31320,
#Partially deleted in new
chr19	36689399	36721326	chr19:36689399-36721326	1	+	36712469	36720668	789624	4	98,127,87,2379,	0,22986,23381,29548,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	36711239	36721321	chr19:36711239-36721321	1	+	36712469	36720668	789624	3	1273,87,2374,	0,1541,7708,
#Partially deleted in new
chr19	36712439	36723347	chr19:36712439-36723347	0	+	36712439	36723223	789624	3	73,87,159,	0,341,10749,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	36712481	36727701	chr19:36712481-36727701	0	+	36712481	36723223	789624	5	31,87,64,122,179,	0,299,10707,14611,15041,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	36714382	36772825	chr19:36714382-36772825	1	-	36714480	36762606	789624	5	118,96,127,81,101,	0,47260,47922,48212,58342,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	36743477	36772814	chr19:36743477-36772814	1	-	36747766	36762606	789624	4	7327,127,81,90,	0,18827,19117,29247,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	36743484	36772814	chr19:36743484-36772814	3	-	36747766	36762606	789624	5	7320,96,127,81,90,	0,18158,18820,19110,29240,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	36773152	36777078	chr19:36773152-36777078	3	+	36773152	36773152	8553170	2	157,1693,	0,2233,
#Partially deleted in new
chr19	36773189	36775711	chr19:36773189-36775711	0	+	36773189	36773189	8553170	2	320,326,	0,2196,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	36773711	36775908	chr19:36773711-36775908	3	-	36773711	36773711	8553170	1	2197,	0,
#Partially deleted in new
chr19	36797524	36802200	chr19:36797524-36802200	1	+	36797524	36797524	8553170	3	287,38,325,	0,3678,4351,
#Partially deleted in new
chr19	36797562	36828101	chr19:36797562-36828101	3	+	36797562	36797562	789624	4	249,58,91,452,	0,4313,26168,30087,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	36801208	36828115	chr19:36801208-36828115	1	+	36801208	36801208	8553170	4	32,58,97,466,	0,667,11301,26441,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	36817427	36838384	chr19:36817427-36838384	1	-	36818432	36825619	789624	5	2687,96,124,82,48,	0,5857,6239,8183,20909,
#Partially deleted in new
chr19	36818321	36850787	chr19:36818321-36850787	3	-	36818432	36825619	789624	5	1793,96,124,82,88,	0,4963,5345,7289,32378,
#Partially deleted in new
chr19	36818321	36850267	chr19:36818321-36850267	1	-	36818432	36825619	789624	5	1793,96,124,82,266,	0,4963,5345,7289,31680,
#Partially deleted in new
chr19	36818321	36838027	chr19:36818321-36838027	1	-	36818432	36825619	789624	5	1793,96,124,82,356,	0,4963,5345,7289,19350,
#Partially deleted in new
chr19	36819806	36850313	chr19:36819806-36850313	0	-	36819806	36825619	789624	5	308,96,124,82,312,	0,3478,3860,5804,30195,
#Partially deleted in new
chr19	36819923	36850787	chr19:36819923-36850787	0	-	36819923	36825619	789624	5	191,96,124,82,88,	0,3361,3743,5687,30776,
#Partially deleted in new
chr19	36819936	36838095	chr19:36819936-36838095	0	-	36819936	36825619	789624	5	178,96,124,82,58,	0,3348,3730,5674,18101,
#Partially deleted in new
chr19	36823364	36838027	chr19:36823364-36838027	0	-	36823364	36825619	789624	4	16,124,82,356,	0,302,2246,14307,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	36850360	36879572	chr19:36850360-36879572	3	+	36876830	36878297	789624	3	155,177,2788,	0,1367,26424,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	36850875	36892930	chr19:36850875-36892930	0	+	36876830	36892930	789624	5	93,75,198,92,113,	0,954,21675,25909,41942,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	36850875	36879574	chr19:36850875-36879574	1	+	36876830	36878297	789624	4	93,75,145,2790,	0,954,3574,25909,
#Partially deleted in new
chr19	36850877	36877054	chr19:36850877-36877054	0	+	36876830	36877054	789624	4	91,75,145,270,	0,952,3572,25907,
#Partially deleted in new
chr19	36850889	36878601	chr19:36850889-36878601	1	+	36876830	36878297	789624	3	79,75,1817,	0,940,25895,
#Partially deleted in new
chr19	36850894	36893034	chr19:36850894-36893034	1	+	36876830	36892999	789624	4	74,75,92,217,	0,935,25890,41923,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	36850929	36913029	chr19:36850929-36913029	0	+	36850929	36850929	8553170	4	39,75,168,303,	0,900,41888,61797,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	36851162	36879569	chr19:36851162-36879569	1	+	36876830	36878297	789624	2	742,2785,	0,25622,
#Partially deleted in new
chr19	36851650	36877169	chr19:36851650-36877169	0	+	36876830	36877169	789624	3	73,75,385,	0,179,25134,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	36851650	36879574	chr19:36851650-36879574	1	+	36876830	36878297	789624	3	73,75,2790,	0,179,25134,
#Partially deleted in new
chr19	36851654	36893034	chr19:36851654-36893034	0	+	36851654	36851654	8553170	3	69,75,217,	0,175,41163,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	36851658	36877113	chr19:36851658-36877113	0	+	36876830	36877113	789624	4	65,75,95,329,	0,171,11258,25126,
#Partially deleted in new
chr19	36851744	36893034	chr19:36851744-36893034	0	+	36851744	36851744	8553170	2	160,217,	0,41073,
#Partially deleted in new
chr19	36851851	36893030	chr19:36851851-36893030	0	+	36851851	36851851	8553170	3	53,145,213,	0,2598,40966,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	36858226	36858329	chr19:36858226-36858329	3	-	36858226	36858226	8553170	1	103,	0,
#Partially deleted in new
chr19	36872697	36877384	chr19:36872697-36877384	0	+	36876830	36877384	789624	2	51,600,	0,4087,
#Deleted in new
chr19	36876800	36878180	chr19:36876800-36878180	1	+	36876800	36878180	789624	4	28,57,247,631,	0,127,250,749,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	36888123	36916021	chr19:36888123-36916021	1	-	36891491	36915954	789624	6	4348,96,127,58,122,226,	0,19805,20209,26841,27006,27672,
#Partially deleted in new
chr19	36891350	36916291	chr19:36891350-36916291	3	-	36891491	36915167	789624	6	1121,96,127,58,122,281,	0,16578,16982,23614,23779,24660,
#Deleted in new
chr19	36901741	36902117	chr19:36901741-36902117	7	+	36901741	36901741	16724991	1	376,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	36905433	36916291	chr19:36905433-36916291	0	-	36905433	36905433	8553170	5	2591,127,58,122,281,	0,2899,9531,9696,10577,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	36916328	36979907	chr19:36916328-36979907	1	+	36922770	36979114	789624	8	263,70,261,59,127,96,47,904,	0,1250,6257,8871,20417,20818,58091,62675,
#Partially deleted in new
chr19	36916340	36951088	chr19:36916340-36951088	3	+	36922770	36951088	789624	7	251,70,261,59,127,96,1577,	0,1238,6245,8859,20405,20806,33171,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	36916340	36936824	chr19:36916340-36936824	0	+	36936802	36936824	789624	5	251,70,59,93,79,	0,1238,8859,15212,20405,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	36916342	36952743	chr19:36916342-36952743	1	+	36936802	36951088	789624	5	249,70,127,96,3232,	0,1236,20403,20804,33169,
#Partially deleted in new
chr19	36916363	36997440	chr19:36916363-36997440	0	+	36922770	36997440	789624	10	228,70,261,59,127,96,47,124,96,1124,	0,1215,6222,8836,20382,20783,58056,74812,75387,79953,
#Partially deleted in new
chr19	36916448	36997932	chr19:36916448-36997932	1	+	36936802	36997599	789624	9	143,70,59,127,96,47,124,96,1616,	0,1130,8751,20297,20698,57971,74727,75302,79868,
#Partially deleted in new
chr19	36916454	36950936	chr19:36916454-36950936	0	+	36936802	36950936	789624	6	137,70,59,127,96,1425,	0,1124,8745,20291,20692,33057,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	36922561	36952741	chr19:36922561-36952741	1	+	36922770	36951088	789624	5	285,59,127,96,3230,	0,2638,14184,14585,26950,
#Partially deleted in new
chr19	36922570	36997932	chr19:36922570-36997932	1	+	36922770	36997599	789624	8	276,59,127,96,47,124,96,1616,	0,2629,14175,14576,51849,68605,69180,73746,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	36936654	36952741	chr19:36936654-36952741	1	+	36936802	36950481	789624	4	218,96,950,2278,	0,492,12857,13809,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	36973212	36980317	chr19:36973212-36980317	1	+	36974457	36979114	789624	3	541,47,1314,	0,1207,5791,
#Partially deleted in new
chr19	36973214	36997235	chr19:36973214-36997235	0	+	36974457	36997235	789624	5	539,47,124,96,919,	0,1205,17961,18536,23102,
#Partially deleted in new
chr19	36973217	36991243	chr19:36973217-36991243	0	+	36974457	36991243	789624	3	193,47,68,	0,1202,17958,
#Partially deleted in new
chr19	36973537	36996518	chr19:36973537-36996518	0	+	36991809	36996518	789624	4	216,47,96,202,	0,882,18213,22779,
#Partially deleted in new
chr19	36973560	36996455	chr19:36973560-36996455	0	+	36991809	36996455	789624	5	193,47,41,96,139,	0,859,2766,18190,22756,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	36991052	36998700	chr19:36991052-36998700	0	+	36991052	36991052	8553170	2	794,2384,	0,5264,
#Partially deleted in new
chr19	37007856	37127442	chr19:37007856-37127442	0	+	37127204	37127442	789624	2	226,315,	0,119271,
#Partially deleted in new
chr19	37007858	37127255	chr19:37007858-37127255	0	+	37089118	37127255	789624	5	224,44,89,127,128,	0,72486,81180,83136,119269,
#Deleted in new
chr19	37024885	37025254	chr19:37024885-37025254	7	-	37024885	37024885	16724991	1	369,	0,
#Partially deleted in new
chr19	37075112	37078605	chr19:37075112-37078605	3	-	37075112	37075112	8553170	2	64,508,	0,2985,
#Partially deleted in new
chr19	37078434	37130310	chr19:37078434-37130310	1	+	37089118	37130236	789624	6	136,44,89,127,1275,274,	0,1910,10604,12560,48693,51602,
#Partially deleted in new
chr19	37078445	37127481	chr19:37078445-37127481	0	+	37089118	37127481	789624	4	125,89,127,354,	0,10593,12549,48682,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37078479	37130311	chr19:37078479-37130311	3	+	37089118	37129058	789624	5	91,44,89,127,3184,	0,1865,10559,12515,48648,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	37091340	37092564	chr19:37091340-37092564	3	+	37091340	37091340	8553170	1	1224,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	37093018	37207074	chr19:37093018-37207074	0	-	37093045	37207074	789624	4	134,93,127,35,	0,62846,63210,114021,
#Partially deleted in new
chr19	37128166	37130310	chr19:37128166-37130310	0	+	37128166	37130175	789624	2	236,167,	0,1977,
#Partially deleted in new
chr19	37128612	37130314	chr19:37128612-37130314	0	+	37128612	37128612	8553170	2	294,171,	0,1531,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37145539	37172741	chr19:37145539-37172741	3	-	37151588	37169910	789624	5	8067,93,127,216,115,	0,10325,10689,24299,27087,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	37147437	37172741	chr19:37147437-37172741	1	-	37151588	37156262	789624	6	6169,93,127,102,216,115,	0,8427,8791,18157,22401,25189,
#Partially deleted in new
chr19	37151009	37172436	chr19:37151009-37172436	1	-	37151588	37156262	789624	6	2597,93,127,102,216,55,	0,4855,5219,14585,18829,21372,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37156330	37210512	chr19:37156330-37210512	0	-	37198955	37207111	789624	5	25,147,116,215,72,	0,39550,42608,50709,54110,
#Partially deleted in new
chr19	37165382	37207254	chr19:37165382-37207254	3	-	37169899	37207111	789624	5	314,216,93,127,215,	0,4456,24278,24641,41657,
#Partially deleted in new
chr19	37165384	37172694	chr19:37165384-37172694	1	-	37165690	37169910	789624	3	312,216,68,	0,4454,7242,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37181578	37210549	chr19:37181578-37210549	3	-	37185226	37207111	789624	5	5666,93,127,215,109,	0,8082,8445,25461,28862,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	37184819	37190476	chr19:37184819-37190476	1	-	37185226	37190057	789624	3	2425,93,453,	0,4841,5204,
#Partially deleted in new
chr19	37184821	37210484	chr19:37184821-37210484	1	-	37186892	37207111	789624	6	2107,146,93,127,215,44,	0,2277,4839,5202,22218,25619,
#Partially deleted in new
chr19	37187079	37210505	chr19:37187079-37210505	0	-	37187079	37198965	789624	5	165,93,127,116,47,	0,2581,2944,11859,23379,
#Partially deleted in new
chr19	37189547	37199008	chr19:37189547-37199008	1	-	37189652	37198965	789624	3	206,127,70,	0,476,9391,
#Partially deleted in new
chr19	37189702	37210549	chr19:37189702-37210549	0	-	37198955	37207111	789624	5	51,127,116,215,91,	0,321,9236,17337,20756,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37189733	37210531	chr19:37189733-37210531	0	-	37195908	37207111	789624	5	20,127,139,215,73,	0,290,6147,17306,20725,
#Partially deleted in new
chr19	37207194	37218153	chr19:37207194-37218153	0	-	37207194	37207194	8553170	2	60,536,	0,10423,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	37218182	37225212	chr19:37218182-37225212	0	+	37218182	37218182	8553170	2	92,395,	0,6635,
#Partially deleted in new
chr19	37218189	37243685	chr19:37218189-37243685	1	+	37230453	37243664	789624	6	28,151,54,127,96,1217,	0,1409,12219,17359,17789,24279,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37226463	37248738	chr19:37226463-37248738	1	+	37230453	37243664	789624	5	213,54,127,96,6270,	0,3945,9085,9515,16005,
#Partially deleted in new
chr19	37230411	37242750	chr19:37230411-37242750	0	+	37230453	37236005	789624	4	51,210,96,282,	0,5137,5567,12057,
#Partially deleted in new
chr19	37251911	37263762	chr19:37251911-37263762	0	+	37251911	37251911	8553170	4	271,84,114,84,	0,3987,10630,11767,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	37251921	37265473	chr19:37251921-37265473	3	+	37251921	37251921	789624	6	261,84,88,80,114,188,	0,3977,4805,10433,10620,13364,
#Partially deleted in new
chr19	37251925	37263613	chr19:37251925-37263613	1	+	37251925	37251925	789624	8	257,84,121,88,383,122,114,530,	0,3973,4473,4801,5086,7022,10616,11158,
#Partially deleted in new
chr19	37255898	37265531	chr19:37255898-37265531	0	+	37255898	37255898	8553170	3	84,60,246,	0,8797,9387,
#Partially deleted in new
chr19	37255915	37265475	chr19:37255915-37265475	0	+	37255915	37255915	8553170	2	67,190,	0,9370,
#Partially deleted in new
chr19	37256398	37265535	chr19:37256398-37265535	0	+	37256398	37256398	8553170	4	121,88,164,250,	0,328,832,8887,
#Partially deleted in new
chr19	37265938	37271388	chr19:37265938-37271388	1	-	37265938	37265938	8553170	3	147,170,103,	0,875,5347,
#Partially deleted in new
chr19	37265940	37267193	chr19:37265940-37267193	1	-	37265940	37265940	8553170	2	145,380,	0,873,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	37265945	37268248	chr19:37265945-37268248	3	-	37265945	37265945	8553170	1	2303,	0,
#Partially deleted in new
chr19	37265946	37268984	chr19:37265946-37268984	1	-	37265946	37265946	8553170	3	139,170,238,	0,867,2800,
#Partially deleted in new
chr19	37266069	37271518	chr19:37266069-37271518	1	-	37266069	37266069	8553170	4	16,170,394,233,	0,744,1148,5216,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	37312836	37364445	chr19:37312836-37364445	1	+	37362614	37363775	789624	9	476,38,58,141,127,96,78,121,2337,	0,10696,11371,11959,34353,34940,45125,45704,49272,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	37314867	37315620	chr19:37314867-37315620	3	-	37314867	37314867	8553170	1	753,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37317899	37329105	chr19:37317899-37329105	0	+	37317899	37317899	8553170	5	287,48,38,58,527,	0,4285,5633,6308,10679,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	37317903	37347196	chr19:37317903-37347196	0	+	37317903	37317903	8553170	6	283,48,38,58,141,7,	0,4281,5629,6304,6892,29286,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	37317910	37364446	chr19:37317910-37364446	3	+	37362614	37363775	789624	6	276,48,38,58,96,2338,	0,4274,5622,6297,29866,44198,
#Partially deleted in new
chr19	37317916	37347258	chr19:37317916-37347258	0	+	37317916	37317916	8553170	6	270,48,38,58,88,69,	0,4268,5616,6291,27017,29273,
#Partially deleted in new
chr19	37317916	37347810	chr19:37317916-37347810	0	+	37347282	37347810	789624	5	270,38,58,127,34,	0,5616,6291,29273,29860,
#Partially deleted in new
chr19	37318038	37344797	chr19:37318038-37344797	0	+	37344684	37344797	789624	5	148,48,38,58,188,	0,4146,5494,6169,26571,
#Partially deleted in new
chr19	37334623	37362299	chr19:37334623-37362299	0	+	37347282	37362299	789624	4	159,127,96,191,	0,12566,13153,27485,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37334639	37362146	chr19:37334639-37362146	1	+	37347282	37362133	789624	5	143,127,96,121,38,	0,12550,13137,24786,27469,
#Partially deleted in new
chr19	37334655	37362209	chr19:37334655-37362209	0	+	37347282	37362209	789624	6	127,89,70,85,96,101,	0,513,11767,12576,13121,27453,
#Partially deleted in new
chr19	37334657	37362273	chr19:37334657-37362273	0	+	37335224	37362273	789624	5	125,89,85,96,168,	0,511,12574,13119,27448,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37334665	37364451	chr19:37334665-37364451	1	+	37335224	37363775	789624	5	117,89,127,96,2343,	0,503,12524,13111,27443,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37334670	37347839	chr19:37334670-37347839	0	+	37335224	37346980	789624	5	112,89,165,127,63,	0,498,12217,12519,13106,
#Partially deleted in new
chr19	37334670	37363864	chr19:37334670-37363864	1	+	37335224	37363775	789624	5	112,58,127,96,1759,	0,529,12519,13106,27435,
#Partially deleted in new
chr19	37334670	37346675	chr19:37334670-37346675	0	+	37334670	37334670	8553170	4	112,89,88,253,	0,498,10263,11752,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	37334677	37364455	chr19:37334677-37364455	1	+	37344684	37363775	789624	6	105,89,165,127,96,2347,	0,491,9932,12512,13099,27431,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37334711	37359776	chr19:37334711-37359776	1	+	37335224	37359685	789624	5	71,89,127,96,351,	0,457,12478,13065,24714,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	37337235	37337743	chr19:37337235-37337743	3	+	37337235	37337235	8553170	2	352,23,	0,485,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	37346296	37364447	chr19:37346296-37364447	1	+	37347282	37363775	789624	4	196,127,96,2339,	0,893,1480,15812,
#Partially deleted in new
chr19	37346355	37369365	chr19:37346355-37369365	1	+	37347282	37369189	789624	4	137,127,96,187,	0,834,1421,22823,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	37346771	37347807	chr19:37346771-37347807	0	+	37347282	37347807	789624	2	545,31,	0,1005,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	37347189	37362274	chr19:37347189-37362274	1	+	37347282	37362133	789624	4	127,96,121,166,	0,587,11351,14919,
#Deleted in new
chr19	37361967	37363929	chr19:37361967-37363929	0	+	37361967	37361967	8553170	1	1962,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37371158	37385644	chr19:37371158-37385644	1	+	37374198	37384986	789624	5	68,74,127,96,777,	0,2999,7961,9118,13709,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37371160	37390770	chr19:37371160-37390770	3	+	37374198	37389879	789624	5	66,74,127,96,2465,	0,2997,7959,9116,17145,
#Partially deleted in new
chr19	37371160	37388618	chr19:37371160-37388618	0	+	37374198	37388618	789624	4	66,74,127,313,	0,2997,7959,17145,
#Partially deleted in new
chr19	37371176	37388783	chr19:37371176-37388783	0	+	37374198	37380303	789624	5	50,74,117,96,478,	0,2981,7943,9100,17129,
#Duplicated in new
chr19	37371180	37393066	chr19:37371180-37393066	0	+	37374198	37380172	789624	5	46,74,127,325,4761,	0,2977,7939,8867,17125,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	37371193	37392894	chr19:37371193-37392894	1	+	37374198	37385375	789624	7	33,74,127,96,114,75,480,	0,2964,7926,9083,13674,14111,21221,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	37401403	37403846	chr19:37401403-37403846	3	-	37401403	37401403	8553170	1	2443,	0,
#Partially deleted in new
chr19	37411154	37467437	chr19:37411154-37467437	3	-	37412596	37444921	789624	6	3265,96,127,58,161,354,	0,14713,15097,33752,54158,55929,
#Partially deleted in new
chr19	37411154	37467229	chr19:37411154-37467229	1	-	37412596	37444921	789624	5	3265,96,127,58,143,	0,14713,15097,33752,55932,
#Partially deleted in new
chr19	37412554	37444959	chr19:37412554-37444959	1	-	37412596	37414180	789624	2	1865,53,	0,32352,
#Partially deleted in new
chr19	37413948	37469270	chr19:37413948-37469270	0	-	37413948	37454862	789624	9	471,96,127,58,240,161,66,207,290,	0,11919,12303,30958,40885,51364,52790,53135,55032,
#Partially deleted in new
chr19	37414184	37467208	chr19:37414184-37467208	1	-	37414368	37444921	789624	4	235,58,161,125,	0,30722,51128,52899,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	37425628	37455075	chr19:37425628-37455075	1	-	37425862	37454862	789624	4	335,127,58,242,	0,623,19278,29205,
#Partially deleted in new
chr19	37426251	37467461	chr19:37426251-37467461	0	-	37426251	37454862	789624	5	127,58,240,161,203,	0,18655,28582,39061,41007,
#Partially deleted in new
chr19	37426338	37469275	chr19:37426338-37469275	0	-	37426338	37426338	8553170	5	40,89,58,161,295,	0,5220,18568,38974,42642,
#Partially deleted in new
chr19	37467584	37470339	chr19:37467584-37470339	0	+	37467890	37468025	789624	3	460,81,36,	0,1892,2719,
#Partially deleted in new
chr19	37467771	37485320	chr19:37467771-37485320	1	+	37467890	37485233	789624	6	155,81,84,127,96,1442,	0,1705,2532,8109,8567,16107,
#Deleted in new
chr19	37469057	37470234	chr19:37469057-37470234	0	+	37469057	37469057	8553170	2	500,61,	0,1116,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37469079	37488652	chr19:37469079-37488652	3	+	37470354	37485233	789624	5	478,84,127,96,4774,	0,1224,6801,7259,14799,
#Partially deleted in new
chr19	37469355	37485358	chr19:37469355-37485358	0	+	37475973	37476439	789624	4	202,127,155,1480,	0,6525,6983,14523,
#Partially deleted in new
chr19	37469418	37483960	chr19:37469418-37483960	0	+	37470354	37476439	789624	5	139,84,127,155,82,	0,885,6462,6920,14460,
#Partially deleted in new
chr19	37469570	37484067	chr19:37469570-37484067	0	+	37470354	37484067	789624	5	85,84,127,96,189,	0,733,6310,6768,14308,
#Partially deleted in new
chr19	37497158	37506624	chr19:37497158-37506624	1	-	37497158	37497158	8553170	3	434,69,42,	0,8813,9424,
#Deleted in new
chr19	37497163	37498175	chr19:37497163-37498175	0	-	37497163	37497163	8553170	2	429,152,	0,860,
#Partially deleted in new
chr19	37497356	37506967	chr19:37497356-37506967	1	-	37497356	37497356	789624	3	236,195,129,	0,8489,9482,
#Partially deleted in new
chr19	37497362	37506267	chr19:37497362-37506267	0	-	37497362	37497362	8553170	3	230,195,23,	0,8483,8882,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	37503905	37504465	chr19:37503905-37504465	3	-	37503905	37503905	8553170	1	560,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	37505578	37507046	chr19:37505578-37507046	2	-	37505578	37505578	8553170	2	462,208,	0,1260,
#Partially deleted in new
chr19	37506981	37537911	chr19:37506981-37537911	3	+	37523439	37537879	789624	6	66,139,45,127,96,1015,	0,1283,16428,25374,26326,29915,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	37507139	37540289	chr19:37507139-37540289	1	+	37523439	37536508	789624	8	72,139,129,116,45,127,96,3825,	0,1125,13044,15392,16270,25216,26168,29325,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	37507217	37536530	chr19:37507217-37536530	1	+	37523439	37533561	789624	7	90,139,129,116,45,127,3223,	0,1047,12966,15314,16192,25138,26090,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	37508263	37543298	chr19:37508263-37543298	1	+	37523439	37542215	789624	8	140,129,116,45,127,96,171,1091,	0,11920,14268,15146,24092,25044,28633,33944,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	37523404	37543335	chr19:37523404-37543335	1	+	37523439	37537879	789624	4	50,127,96,6439,	0,8951,9903,13492,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37523404	37540265	chr19:37523404-37540265	1	+	37536940	37537859	789624	5	50,127,96,1049,2751,	0,8951,9903,13060,14110,
#Partially deleted in new
chr19	37532362	37533678	chr19:37532362-37533678	0	+	37532362	37533520	789624	3	120,96,193,	0,945,1123,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	37533307	37548762	chr19:37533307-37548762	0	+	37533307	37546166	789624	4	96,840,133,171,	0,12776,15054,15284,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	37545469	37549171	chr19:37545469-37549171	3	-	37545469	37545469	8553170	2	2944,323,	0,3379,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	37548913	37585759	chr19:37548913-37585759	0	+	37548913	37548913	8553170	3	242,59,421,	0,17117,36425,
#Deleted in new
chr19	37548927	37549614	chr19:37548927-37549614	0	+	37548927	37548927	8553170	2	228,82,	0,605,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37548946	37587348	chr19:37548946-37587348	1	+	37548946	37548946	789624	5	209,59,147,352,2010,	0,17084,20903,34536,36392,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	37548950	37587348	chr19:37548950-37587348	1	+	37548950	37548950	789624	6	205,130,59,133,147,2010,	0,1911,17080,18667,20899,36388,
#Partially deleted in new
chr19	37548966	37585436	chr19:37548966-37585436	0	+	37548966	37548966	8553170	3	189,147,98,	0,20883,36372,
#Partially deleted in new
chr19	37548974	37585456	chr19:37548974-37585456	2	+	37548974	37548974	8553170	4	181,59,147,373,	0,17056,20875,36109,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	37551370	37587348	chr19:37551370-37587348	0	+	37551370	37551370	789624	4	295,59,147,2010,	0,14660,18479,33968,
#Partially deleted in new
chr19	37551371	37585374	chr19:37551371-37585374	0	+	37551371	37551371	8553170	3	294,147,36,	0,18478,33967,
#Partially deleted in new
chr19	37551376	37583561	chr19:37551376-37583561	0	+	37551376	37551376	8553170	3	289,147,79,	0,18473,32106,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37551405	37614095	chr19:37551405-37614095	3	+	37598447	37613263	789624	5	260,81,127,96,2583,	0,46970,48220,49604,60107,
#Partially deleted in new
chr19	37551411	37585577	chr19:37551411-37585577	1	+	37551411	37551411	8553170	6	254,59,45,147,78,239,	0,14619,15028,18438,33672,33927,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	37551604	37560874	chr19:37551604-37560874	0	+	37551604	37551604	8553170	2	61,482,	0,8788,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37554781	37594755	chr19:37554781-37594755	1	-	37555868	37586676	789624	5	1380,127,78,100,15,	0,29189,31886,39438,39959,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37562391	37594790	chr19:37562391-37594790	3	-	37564597	37586676	789624	5	1390,2468,127,78,50,	0,1432,21579,24276,32349,
#Partially deleted in new
chr19	37564252	37594746	chr19:37564252-37594746	1	-	37564597	37586676	789624	4	2039,127,78,660,	0,19718,22415,29834,
#Partially deleted in new
chr19	37564263	37594772	chr19:37564263-37594772	1	-	37564597	37586676	789624	4	2028,127,78,32,	0,19707,22404,30477,
#Partially deleted in new
chr19	37564568	37594761	chr19:37564568-37594761	1	-	37564597	37586676	789624	5	1723,127,78,100,21,	0,19402,22099,29651,30172,
#Partially deleted in new
chr19	37566184	37584156	chr19:37566184-37584156	0	-	37566184	37584115	789624	2	107,186,	0,17786,
#Partially deleted in new
chr19	37569941	37575822	chr19:37569941-37575822	0	+	37569941	37569941	8553170	2	55,328,	0,5553,
#Partially deleted in new
chr19	37594829	37613387	chr19:37594829-37613387	1	+	37598447	37613263	789624	4	266,81,127,1875,	0,3546,4796,16683,
#Partially deleted in new
chr19	37594875	37601157	chr19:37594875-37601157	0	+	37594875	37594875	8553170	4	220,81,127,148,	0,3500,4750,6134,
#Partially deleted in new
chr19	37594875	37611690	chr19:37594875-37611690	0	+	37594875	37594875	8553170	4	220,81,96,178,	0,3500,6134,16637,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37594885	37614097	chr19:37594885-37614097	1	+	37598447	37613263	789624	5	210,81,127,96,2585,	0,3490,4740,6124,16627,
#Partially deleted in new
chr19	37594904	37611577	chr19:37594904-37611577	0	+	37598447	37611577	789624	5	191,81,127,99,65,	0,3471,4721,6102,16608,
#Partially deleted in new
chr19	37594972	37611872	chr19:37594972-37611872	1	+	37598447	37611593	789624	3	123,81,360,	0,3403,16540,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37595252	37614095	chr19:37595252-37614095	1	+	37598447	37613263	789624	5	186,81,127,96,2583,	0,3123,4373,5757,16260,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	37610987	37614093	chr19:37610987-37614093	0	+	37610987	37610987	8553170	1	3106,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37613748	37654729	chr19:37613748-37654729	1	-	37613818	37647822	789624	5	117,96,127,86,18,	0,29516,30861,34065,40963,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	37631008	37655412	chr19:37631008-37655412	1	-	37634980	37647822	789624	6	5297,99,127,86,168,313,	0,12256,13601,16805,23703,24091,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	37632487	37656261	chr19:37632487-37656261	1	-	37634980	37647822	789624	6	3818,99,127,86,168,142,	0,10777,12122,15326,22224,23632,
#Partially deleted in new
chr19	37636164	37655467	chr19:37636164-37655467	0	-	37636164	37647822	789624	6	141,96,127,86,74,48,	0,7100,8445,11649,18547,19255,
#Partially deleted in new
chr19	37643329	37655830	chr19:37643329-37655830	0	-	37643329	37647822	789624	5	34,127,86,168,168,	0,1280,4484,11382,12333,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	37644395	37655467	chr19:37644395-37655467	0	-	37644395	37644395	8553170	4	341,86,74,48,	0,3418,10316,11024,
#Partially deleted in new
chr19	37647812	37692337	chr19:37647812-37692337	0	-	37647812	37647822	8553170	5	87,74,112,98,186,	0,6899,8497,43708,44339,
#Partially deleted in new
chr19	37647815	37655409	chr19:37647815-37655409	0	-	37647815	37647822	8553170	3	84,74,363,	0,6896,7231,
#Partially deleted in new
chr19	37647883	37692263	chr19:37647883-37692263	0	-	37647883	37647883	8553170	5	16,168,279,98,112,	0,6828,18100,43637,44268,
#Partially deleted in new
chr19	37654714	37655465	chr19:37654714-37655465	0	-	37654714	37654714	8553170	2	165,419,	0,332,
#Partially deleted in new
chr19	37667750	37692322	chr19:37667750-37692322	3	-	37669164	37670148	789624	4	2806,72,98,171,	0,18700,23770,24401,
#Partially deleted in new
chr19	37668853	37692300	chr19:37668853-37692300	1	-	37669164	37670148	789624	5	1703,126,72,98,149,	0,7415,17597,22667,23298,
#Partially deleted in new
chr19	37670653	37692315	chr19:37670653-37692315	0	-	37670653	37670653	8553170	4	193,72,98,164,	0,15797,20867,21498,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	37678622	37692233	chr19:37678622-37692233	0	-	37678622	37678622	8553170	4	151,72,98,82,	0,7828,12898,13529,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37689864	37719188	chr19:37689864-37719188	0	-	37691571	37707950	789624	5	93,98,111,96,174,	0,1656,9920,18049,29150,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	37689882	37719125	chr19:37689882-37719125	3	-	37691571	37711618	789624	7	75,98,111,99,127,83,111,	0,1638,9902,18031,19813,21727,29132,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	37689883	37719125	chr19:37689883-37719125	0	-	37691571	37699857	789624	4	60,98,111,111,	0,1637,9901,29131,
#Deleted in new
chr19	37693279	37693564	chr19:37693279-37693564	7	-	37693279	37693279	16724991	1	285,	0,
#Partially deleted in new
chr19	37696362	37719790	chr19:37696362-37719790	3	-	37698039	37711618	789624	5	3533,99,127,83,522,	0,11551,13333,15247,22906,
#Partially deleted in new
chr19	37696372	37719188	chr19:37696372-37719188	1	-	37698039	37711618	789624	5	3523,96,127,83,174,	0,11541,13323,15237,22642,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	37699324	37719125	chr19:37699324-37719125	0	-	37706506	37711618	789624	6	571,202,96,127,83,111,	0,7057,8589,10371,12285,19690,
#Partially deleted in new
chr19	37699519	37719187	chr19:37699519-37719187	0	-	37699519	37699857	789624	2	376,173,	0,19495,
#Partially deleted in new
chr19	37699819	37719723	chr19:37699819-37719723	0	-	37699819	37711618	789624	4	76,127,83,455,	0,9876,11790,19449,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	37728585	37730643	chr19:37728585-37730643	3	-	37728585	37728585	8553170	2	1199,161,	0,1897,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	37735832	37740138	chr19:37735832-37740138	0	-	37735832	37735832	8553170	2	182,55,	0,4251,
#Partially deleted in new
chr19	37738286	37773751	chr19:37738286-37773751	1	-	37738491	37773729	789624	4	1908,93,133,91,	0,31718,33277,35374,
#Partially deleted in new
chr19	37738301	37779590	chr19:37738301-37779590	1	-	37738491	37770035	789624	4	1893,93,91,47,	0,31703,35359,41242,
#Partially deleted in new
chr19	37738301	37817300	chr19:37738301-37817300	1	-	37738491	37771597	789624	3	1893,133,240,	0,33262,78759,
#Partially deleted in new
chr19	37738301	37779590	chr19:37738301-37779590	3	-	37738491	37773729	789624	5	1893,93,133,91,47,	0,31703,33262,35359,41242,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	37738301	37779585	chr19:37738301-37779585	0	-	37770484	37773729	789624	6	1893,93,191,133,91,42,	0,31703,32105,33262,35359,41242,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	37739905	37773745	chr19:37739905-37773745	0	-	37770484	37773729	789624	6	289,70,93,191,133,85,	0,735,30099,30501,31658,33755,
#Partially deleted in new
chr19	37739945	37779563	chr19:37739945-37779563	1	-	37770031	37773729	789624	4	249,93,91,20,	0,30059,33715,39598,
#Partially deleted in new
chr19	37740060	37779574	chr19:37740060-37779574	0	-	37740060	37773729	789624	5	134,93,127,91,31,	0,29944,31503,33600,39483,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	37740083	37779553	chr19:37740083-37779553	0	-	37759101	37773729	789624	7	97,61,93,93,133,91,10,	0,15117,18963,29921,31480,33577,39460,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	37770038	37779583	chr19:37770038-37779583	0	-	37770038	37773729	789624	6	59,133,45,91,114,40,	0,1525,2899,3622,8394,9505,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	37770406	37779878	chr19:37770406-37779878	0	-	37770406	37770406	8553170	3	191,133,335,	0,1157,9137,
#Partially deleted in new
chr19	37779685	37792772	chr19:37779685-37792772	7	+	37779685	37779685	16724991	2	338,108,	0,12979,
#Deleted in new
chr19	37791771	37792865	chr19:37791771-37792865	5	+	37791771	37791771	16724991	1	1094,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	37792569	37817221	chr19:37792569-37817221	0	-	37792569	37792569	8553170	4	284,80,196,161,	0,1406,18035,24491,
#Partially deleted in new
chr19	37793432	37817261	chr19:37793432-37817261	0	-	37793432	37793432	8553170	2	295,201,	0,23628,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	37793629	37817259	chr19:37793629-37817259	0	-	37793629	37793629	8553170	4	98,80,196,199,	0,346,16975,23431,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	37793975	37817292	chr19:37793975-37817292	0	-	37793975	37793975	8553170	4	80,52,196,232,	0,5136,16629,23085,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	37794034	37817270	chr19:37794034-37817270	0	-	37794034	37794034	8553170	4	21,105,196,210,	0,106,16570,23026,
#Partially deleted in new
chr19	37817358	37820295	chr19:37817358-37820295	5	+	37817358	37817358	16724991	3	368,121,72,	0,2138,2865,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	37817410	37832160	chr19:37817410-37832160	7	+	37817410	37817410	16724991	5	291,121,83,96,5989,	0,2086,2813,6400,8761,
#Deleted in new
chr19	37822622	37823906	chr19:37822622-37823906	5	+	37822622	37822622	16724991	2	111,96,	0,1188,
#Partially deleted in new
chr19	37823721	37855196	chr19:37823721-37855196	7	-	37823721	37823721	16724991	6	996,272,168,123,64,93,	0,1347,9625,13171,30177,31382,
#Partially deleted in new
chr19	37829049	37836964	chr19:37829049-37836964	5	-	37829049	37829049	16724991	3	2802,108,72,	0,4357,7843,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	37833367	37855215	chr19:37833367-37855215	5	-	37833367	37833367	16724991	4	147,123,120,112,	0,3525,19634,21736,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	37833462	37853547	chr19:37833462-37853547	4	-	37833462	37833462	16724991	4	52,123,120,258,	0,3430,19539,19827,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	37836817	37853525	chr19:37836817-37853525	4	-	37836817	37836817	16724991	3	198,120,236,	0,16184,16472,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	37884822	37906613	chr19:37884822-37906613	1	-	37884931	37898239	789624	6	5454,269,2879,171,121,115,	0,6729,7755,11315,13342,21676,
#Partially deleted in new
chr19	37884931	37906677	chr19:37884931-37906677	3	-	37884931	37898239	789624	6	5345,269,2879,54,121,179,	0,6620,7646,11323,13233,21567,
#Partially deleted in new
chr19	37896011	37906622	chr19:37896011-37906622	0	-	37896011	37896011	8553170	3	297,121,124,	0,2153,10487,
#Partially deleted in new
chr19	37907227	38208372	chr19:37907227-38208372	3	+	38081565	38206240	789624	22	131,68,1844,131,189,175,104,158,577,275,252,138,128,119,428,222,166,244,144,136,82,2276,	0,121861,174028,181493,192734,193824,199309,202999,212078,223270,233956,235345,245612,255025,257251,275291,284917,286309,291161,294634,296899,298869,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	37907244	37907974	chr19:37907244-37907974	0	+	37907244	37907244	8553170	2	114,431,	0,299,
#Partially deleted in new
chr19	37932345	38081448	chr19:37932345-38081448	0	+	37932345	37932345	8553170	3	347,68,193,	0,96743,148910,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	38099981	38110315	chr19:38099981-38110315	0	+	38099981	38106440	789624	4	169,175,352,89,	0,1070,6307,10245,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	38108499	38109533	chr19:38108499-38109533	3	-	38108499	38108499	8553170	2	183,145,	0,889,
#Deleted in new
chr19	38109663	38110359	chr19:38109663-38110359	0	+	38109663	38109663	8553170	2	413,133,	0,563,
#Partially deleted in new
chr19	38110198	38119493	chr19:38110198-38119493	0	+	38110198	38110198	8553170	2	186,188,	0,9107,
#Partially deleted in new
chr19	38119648	38130831	chr19:38119648-38130831	0	+	38119648	38119648	8553170	2	234,334,	0,10849,
#Partially deleted in new
chr19	38164770	38182966	chr19:38164770-38182966	0	+	38164770	38164770	8553170	2	136,448,	0,17748,
#Partially deleted in new
chr19	38173625	38193676	chr19:38173625-38193676	0	+	38173643	38193676	789624	4	47,222,166,137,	0,8893,18519,19914,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	38184375	38186265	chr19:38184375-38186265	3	+	38184375	38184375	8553170	1	1890,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	38199835	38200934	chr19:38199835-38200934	3	+	38199835	38199835	8553170	2	332,100,	0,999,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	38200233	38200532	chr19:38200233-38200532	3	+	38200233	38200233	8553170	1	299,	0,
#Partially deleted in new
chr19	38203691	38206390	chr19:38203691-38206390	0	+	38203691	38203691	8553170	2	517,294,	0,2405,
#Partially deleted in new
chr19	38211005	38224250	chr19:38211005-38224250	1	-	38212062	38224223	789624	11	1128,112,113,120,51,79,90,128,108,161,137,	0,1274,2638,5134,5347,6792,7567,7925,11351,11542,13108,
#Partially deleted in new
chr19	38211008	38229677	chr19:38211008-38229677	1	-	38212062	38222572	789624	12	1125,82,113,120,51,132,79,90,128,108,156,119,	0,1271,2635,5131,5344,6451,6789,7564,7922,11348,11539,18550,
#Partially deleted in new
chr19	38211008	38224250	chr19:38211008-38224250	1	-	38212062	38224142	789624	12	1125,112,113,120,51,132,79,90,128,108,161,137,	0,1271,2635,5131,5344,6451,6789,7564,7922,11348,11539,13105,
#Partially deleted in new
chr19	38211042	38229714	chr19:38211042-38229714	1	-	38212062	38229590	789624	12	1091,112,113,120,51,132,79,90,128,108,161,156,	0,1237,2601,5097,5310,6417,6755,7530,7888,11314,11505,18516,
#Partially deleted in new
chr19	38211699	38229673	chr19:38211699-38229673	0	-	38219051	38229590	789624	12	434,82,113,120,51,132,79,90,128,108,156,115,	0,580,1944,4440,4653,5760,6098,6873,7231,10657,10848,17859,
#Partially deleted in new
chr19	38211701	38223298	chr19:38211701-38223298	1	-	38212062	38222572	789624	12	432,82,113,120,51,132,79,90,128,108,161,464,	0,578,1942,4438,4651,5758,6096,6871,7229,10655,10846,11133,
#Partially deleted in new
chr19	38211702	38224250	chr19:38211702-38224250	3	-	38212062	38224223	789624	12	431,82,113,120,51,132,79,90,128,108,161,137,	0,577,1941,4437,4650,5757,6095,6870,7228,10654,10845,12411,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	38211716	38219939	chr19:38211716-38219939	0	-	38211716	38211716	8553170	8	417,82,113,120,51,417,90,1009,	0,563,1927,4423,4636,5743,6856,7214,
#Partially deleted in new
chr19	38211754	38229677	chr19:38211754-38229677	1	-	38212062	38229590	789624	12	379,82,113,120,51,132,79,90,128,108,161,119,	0,525,1889,4385,4598,5705,6043,6818,7176,10602,10793,17804,
#Partially deleted in new
chr19	38211961	38217652	chr19:38211961-38217652	0	-	38211961	38211961	8553170	5	172,82,113,120,193,	0,318,1682,4178,5498,
#Partially deleted in new
chr19	38211973	38224250	chr19:38211973-38224250	0	-	38211973	38211973	8553170	11	160,82,113,120,51,417,90,128,108,161,137,	0,306,1670,4166,4379,5486,6599,6957,10383,10574,12140,
#Partially deleted in new
chr19	38212064	38216510	chr19:38212064-38216510	0	-	38212064	38212064	8553170	5	69,82,113,120,158,	0,215,1579,4075,4288,
#Partially deleted in new
chr19	38212071	38213979	chr19:38212071-38213979	0	-	38212071	38212071	8553170	3	62,82,336,	0,208,1572,
#Partially deleted in new
chr19	38216241	38223961	chr19:38216241-38223961	0	-	38216241	38222572	789624	9	18,51,132,79,90,128,108,161,206,	0,111,1218,1556,2331,2689,6115,6306,7514,
#Partially deleted in new
chr19	38217390	38229654	chr19:38217390-38229654	0	-	38217390	38217390	8553170	6	486,90,128,108,161,96,	0,1182,1540,4966,5157,12168,
#Partially deleted in new
chr19	38218627	38223173	chr19:38218627-38223173	0	-	38218627	38222572	789624	5	35,128,108,161,91,	0,303,3729,3920,4455,
#Partially deleted in new
chr19	38219028	38228693	chr19:38219028-38228693	0	-	38219028	38222572	789624	5	30,108,161,97,32,	0,3328,3519,8917,9633,
#Partially deleted in new
chr19	38244034	38287905	chr19:38244034-38287905	0	+	38283670	38287905	789624	3	100,171,30,	0,39592,43841,
#Partially deleted in new
chr19	38251236	38256591	chr19:38251236-38256591	3	-	38251317	38256339	789624	4	210,33,81,453,	0,1069,1657,4902,
#Partially deleted in new
chr19	38251236	38256532	chr19:38251236-38256532	1	-	38251317	38256339	789624	3	210,33,394,	0,1069,4902,
#Deleted in new
chr19	38251236	38253257	chr19:38251236-38253257	1	-	38251317	38252965	789624	3	210,33,364,	0,1069,1657,
#Partially deleted in new
chr19	38251236	38256372	chr19:38251236-38256372	1	-	38251264	38256339	789624	3	118,81,234,	0,1657,4902,
#Partially deleted in new
chr19	38251864	38256532	chr19:38251864-38256532	1	-	38252254	38256339	789624	3	474,81,394,	0,1029,4274,
#Partially deleted in new
chr19	38264457	38292614	chr19:38264457-38292614	3	+	38264892	38292006	0	7	541,171,60,54,162,39,775,	0,19169,23418,24680,25661,26079,27382,
#Partially deleted in new
chr19	38264575	38292468	chr19:38264575-38292468	1	+	38264892	38292006	0	6	423,60,54,162,39,629,	0,23300,24562,25543,25961,27264,
#Partially deleted in new
chr19	38264575	38292451	chr19:38264575-38292451	1	+	38283670	38292006	789624	7	148,171,60,54,162,39,612,	0,19051,23300,24562,25543,25961,27264,
#Partially deleted in new
chr19	38264667	38290567	chr19:38264667-38290567	0	+	38264892	38290567	789624	5	331,171,54,162,31,	0,18959,24470,25451,25869,
#Partially deleted in new
chr19	38264695	38287981	chr19:38264695-38287981	0	+	38264695	38264695	8553170	3	303,171,106,	0,18931,23180,
#Partially deleted in new
chr19	38265337	38287935	chr19:38265337-38287935	0	+	38283670	38287935	789624	3	309,171,60,	0,18289,22538,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	38288405	38292468	chr19:38288405-38292468	0	+	38288405	38288405	8553170	2	1875,1932,	0,2131,
#Partially deleted in new
chr19	38288880	38290636	chr19:38288880-38290636	0	+	38288880	38288880	8553170	3	311,162,100,	0,1238,1656,
#Partially deleted in new
chr19	38289137	38290887	chr19:38289137-38290887	0	+	38289137	38290712	789624	3	54,162,351,	0,981,1399,
#Partially deleted in new
chr19	38289150	38304910	chr19:38289150-38304910	0	+	38289150	38304684	789624	6	41,162,39,116,63,66,	0,968,1386,15224,15473,15694,
#Partially deleted in new
chr19	38289167	38304909	chr19:38289167-38304909	3	+	38289167	38304684	789624	6	24,162,39,116,122,65,	0,951,1369,15207,15397,15677,
#Deleted in new
chr19	38290186	38292070	chr19:38290186-38292070	0	+	38290186	38292006	789624	3	94,58,231,	0,331,1653,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	38294543	38294636	chr19:38294543-38294636	3	+	38294543	38294543	8553170	1	93,	0,
#Partially deleted in new
chr19	38304160	38305009	chr19:38304160-38305009	3	+	38304261	38304964	789624	4	123,116,63,165,	0,214,463,684,
#Partially deleted in new
chr19	38304163	38305006	chr19:38304163-38305006	1	+	38304261	38304684	789624	4	120,116,122,162,	0,211,401,681,
#Partially deleted in new
chr19	38304250	38305003	chr19:38304250-38305003	0	+	38304250	38304250	8553170	3	240,63,159,	0,373,594,
#Partially deleted in new
chr19	38304272	38305006	chr19:38304272-38305006	0	+	38304272	38304272	8553170	3	218,122,162,	0,292,572,
#Partially deleted in new
chr19	38305103	38315914	chr19:38305103-38315914	1	-	38305351	38309608	789624	8	404,94,156,58,79,105,239,46,	0,2324,2493,3688,3875,4120,4301,10765,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	38305113	38315923	chr19:38305113-38315923	1	-	38305488	38315917	789624	9	394,77,94,156,58,79,105,239,55,	0,1800,2314,2483,3678,3865,4110,4291,10755,
#Partially deleted in new
chr19	38305114	38309923	chr19:38305114-38309923	1	-	38305351	38309608	789624	7	393,94,156,58,79,105,519,	0,2313,2482,3677,3864,4109,4290,
#Partially deleted in new
chr19	38305115	38309139	chr19:38305115-38309139	0	-	38305115	38305115	8553170	4	392,325,58,161,	0,2312,3676,3863,
#Partially deleted in new
chr19	38305117	38315963	chr19:38305117-38315963	3	-	38305351	38315917	789624	8	390,94,156,58,79,105,239,104,	0,2310,2479,3674,3861,4106,4287,10742,
#Partially deleted in new
chr19	38305197	38309643	chr19:38305197-38309643	1	-	38305351	38309608	789624	6	310,94,156,58,79,239,	0,2230,2399,3594,3781,4207,
#Partially deleted in new
chr19	38305351	38315793	chr19:38305351-38315793	1	-	38305351	38315729	789624	8	156,94,156,58,79,105,239,77,	0,2076,2245,3440,3627,3872,4053,10365,
#Partially deleted in new
chr19	38305351	38315799	chr19:38305351-38315799	1	-	38305351	38309608	789624	8	156,94,156,58,79,105,239,53,	0,2076,2245,3440,3627,3872,4053,10395,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	38305361	38307635	chr19:38305361-38307635	0	-	38305361	38305361	8553170	3	146,77,208,	0,1552,2066,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	38306696	38315920	chr19:38306696-38315920	1	-	38306885	38315917	789624	8	294,94,156,58,79,105,239,52,	0,731,900,2095,2282,2527,2708,9172,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	38306761	38315942	chr19:38306761-38315942	0	-	38306761	38306761	8553170	3	991,852,74,	0,2030,9107,
#Partially deleted in new
chr19	38307427	38315736	chr19:38307427-38315736	0	-	38307427	38307427	8553170	6	325,58,79,105,239,312,	0,1364,1551,1796,1977,7997,
#Deleted in new
chr19	38307427	38309643	chr19:38307427-38309643	0	-	38307427	38309643	789624	5	94,58,79,105,239,	0,1364,1551,1796,1977,
#Partially deleted in new
chr19	38307470	38315768	chr19:38307470-38315768	0	-	38307470	38315729	789624	7	51,156,58,79,105,239,46,	0,126,1321,1508,1753,1934,8252,
#Partially deleted in new
chr19	38308810	38315763	chr19:38308810-38315763	0	-	38308810	38308810	8553170	4	39,79,420,41,	0,168,413,6912,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	38309223	38317273	chr19:38309223-38317273	0	-	38309223	38309608	789624	3	105,239,122,	0,181,7928,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	38319843	38332076	chr19:38319843-38332076	3	+	38319950	38327403	789624	3	429,396,4897,	0,6749,7336,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	38320242	38325489	chr19:38320242-38325489	0	+	38320242	38320242	8553170	2	30,447,	0,4800,
#Partially deleted in new
chr19	38335774	38370943	chr19:38335774-38370943	3	+	38337234	38370792	789624	29	101,284,54,145,127,73,156,172,138,60,120,51,130,112,159,113,214,63,199,119,81,57,157,64,96,90,93,100,418,	0,1446,1818,7805,8218,8521,10675,16486,18935,20709,20967,22503,22657,23695,24714,24956,25873,26435,26601,26939,29116,29286,31381,31734,31906,32273,34197,34384,34751,
#Partially deleted in new
chr19	38335774	38370943	chr19:38335774-38370943	1	+	38337234	38370792	789624	28	101,284,54,145,127,73,156,172,138,60,51,130,112,159,113,214,63,199,119,81,57,157,64,96,90,93,100,418,	0,1446,1818,7805,8218,8521,10675,16486,18935,20709,22503,22657,23695,24714,24956,25873,26435,26601,26939,29116,29286,31381,31734,31906,32273,34197,34384,34751,
#Partially deleted in new
chr19	38335817	38370943	chr19:38335817-38370943	0	+	38337234	38354793	789624	29	58,284,54,76,127,73,156,39,138,60,120,51,130,112,159,113,214,63,199,119,81,57,157,64,96,90,93,100,418,	0,1403,1775,7831,8175,8478,10632,16576,18892,20666,20924,22460,22614,23652,24671,24913,25830,26392,26558,26896,29073,29243,31338,31691,31863,32230,34154,34341,34708,
#Partially deleted in new
chr19	38335848	38346603	chr19:38335848-38346603	0	+	38337234	38344306	789624	6	27,284,54,76,73,154,	0,1372,1744,7800,8447,10601,
#Partially deleted in new
chr19	38335995	38361749	chr19:38335995-38361749	0	+	38337234	38361749	789624	17	638,284,54,145,127,73,156,172,138,60,120,51,130,112,159,113,102,	0,1225,1597,7584,7997,8300,10454,16265,18714,20488,20746,22282,22436,23474,24493,24735,25652,
#Partially deleted in new
chr19	38343627	38358560	chr19:38343627-38358560	0	+	38343627	38343627	8553170	6	97,127,73,156,51,129,	0,365,668,2822,14650,14804,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr19	38343666	38370615	chr19:38343666-38370615	0	+	38343666	38354793	789624	26	58,127,73,156,138,60,120,51,130,112,159,113,214,63,199,119,81,57,157,64,96,90,179,93,100,90,	0,326,629,2783,11043,12817,13075,14611,14765,15803,16822,17064,17981,18543,18709,19047,21224,21394,23489,23842,24014,24381,25779,26305,26492,26859,
#Deleted in new
chr19	38343748	38344376	chr19:38343748-38344376	0	+	38343748	38343748	8553170	2	371,81,	0,547,
#Partially deleted in new
chr19	38343826	38346629	chr19:38343826-38346629	0	+	38343826	38343826	8553170	2	542,180,	0,2623,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	38346483	38349629	chr19:38346483-38349629	0	+	38346483	38346483	8553170	2	122,615,	0,2531,
#Partially deleted in new
chr19	38352414	38360580	chr19:38352414-38360580	0	+	38352414	38360580	789624	6	18,138,51,130,112,92,	0,2295,5863,6017,7055,8074,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	38358069	38359647	chr19:38358069-38359647	0	+	38358069	38358069	8553170	3	259,130,178,	0,362,1400,
#Partially deleted in new
chr19	38358511	38359857	chr19:38358511-38359857	0	+	38358511	38358511	8553170	2	50,388,	0,958,
#Deleted in new
chr19	38361794	38362484	chr19:38361794-38362484	3	-	38361794	38361794	8553170	2	141,331,	0,359,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	38364890	38370941	chr19:38364890-38370941	0	+	38364890	38364890	8553170	5	81,3077,102,85,416,	0,170,5081,5283,5635,
#Partially deleted in new
chr19	38374535	38383824	chr19:38374535-38383824	3	+	38374601	38383390	0	7	426,73,103,166,101,112,572,	0,1624,1816,4704,6363,7581,8717,
#Partially deleted in new
chr19	38374549	38383823	chr19:38374549-38383823	1	+	38374601	38383390	0	7	412,73,103,166,101,112,571,	0,1610,1802,4690,6349,7567,8703,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	38374757	38382847	chr19:38374757-38382847	1	+	38374790	38382729	789624	3	204,88,249,	0,1402,7841,
#Partially deleted in new
chr19	38374758	38383824	chr19:38374758-38383824	1	+	38374790	38383390	789624	7	203,73,103,166,101,112,572,	0,1401,1593,4481,6140,7358,8494,
#Partially deleted in new
chr19	38374769	38379363	chr19:38374769-38379363	0	+	38374769	38374769	8553170	3	192,295,124,	0,1390,4470,
#Partially deleted in new
chr19	38374771	38382254	chr19:38374771-38382254	0	+	38374790	38382254	789624	6	190,73,103,166,101,138,	0,1388,1580,4468,6127,7345,
#Partially deleted in new
chr19	38374787	38381235	chr19:38374787-38381235	0	+	38374787	38374787	8553170	5	174,73,103,166,337,	0,1372,1564,4452,6111,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	38375008	38382753	chr19:38375008-38382753	1	+	38376419	38382333	789624	6	501,73,103,166,101,637,	0,1151,1343,4231,5890,7108,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	38375056	38379405	chr19:38375056-38379405	0	+	38376419	38379405	789624	4	236,73,103,166,	0,1103,1295,4183,
#Partially deleted in new
chr19	38380898	38383297	chr19:38380898-38383297	0	+	38380898	38381239	789624	4	101,164,112,45,	0,250,1218,2354,
#Deleted in new
chr19	38384264	38388026	chr19:38384264-38388026	3	-	38384411	38387261	789624	4	265,1860,62,52,	0,1156,3496,3710,
#Deleted in new
chr19	38384352	38388034	chr19:38384352-38388034	0	-	38385492	38387012	789624	5	177,80,1368,62,60,	0,1068,1294,3408,3622,
#Deleted in new
chr19	38384352	38388024	chr19:38384352-38388024	0	-	38384352	38384352	8553170	4	177,80,62,50,	0,1068,3408,3622,
#Deleted in new
chr19	38385521	38386759	chr19:38385521-38386759	3	+	38385521	38385521	8553170	2	212,85,	0,1153,
#Deleted in new
chr19	38386766	38387992	chr19:38386766-38387992	0	-	38386766	38387012	789624	2	263,232,	0,994,
#Deleted in new
chr19	38387082	38388082	chr19:38387082-38388082	0	-	38387082	38387261	789624	2	198,322,	0,678,
#Partially deleted in new
chr19	38388420	38396241	chr19:38388420-38396241	1	+	38388498	38396145	789624	5	387,169,77,144,762,	0,3525,3791,6222,7059,
#Partially deleted in new
chr19	38389611	38396148	chr19:38389611-38396148	1	+	38390302	38396145	789624	6	126,181,169,77,144,669,	0,687,2334,2600,5031,5868,
#Partially deleted in new
chr19	38390054	38394763	chr19:38390054-38394763	0	+	38390302	38394763	789624	5	98,181,169,77,121,	0,244,1891,2157,4588,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	38390199	38399587	chr19:38390199-38399587	3	+	38390302	38396145	789624	5	280,169,77,144,4108,	0,1746,2012,4443,5280,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	38390298	38394670	chr19:38390298-38394670	0	+	38390302	38394396	789624	5	88,169,77,116,28,	0,1647,1913,4062,4344,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	38390298	38394476	chr19:38390298-38394476	0	+	38390298	38390298	8553170	4	181,169,77,116,	0,1647,1913,4062,
#Deleted in new
chr19	38391990	38392647	chr19:38391990-38392647	0	+	38391990	38391990	8553170	2	124,436,	0,221,
#Partially deleted in new
chr19	38403134	38409084	chr19:38403134-38409084	3	+	38403153	38408882	789624	8	84,149,135,206,78,117,168,334,	0,203,425,1773,2209,2384,3775,5616,
#Partially deleted in new
chr19	38403134	38409040	chr19:38403134-38409040	1	+	38403153	38408794	789624	5	84,149,135,168,290,	0,203,425,3775,5616,
#Partially deleted in new
chr19	38403153	38409084	chr19:38403153-38409084	1	+	38403153	38408882	789624	6	65,149,135,206,117,334,	0,184,406,1754,2365,5597,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	38403153	38409088	chr19:38403153-38409088	0	+	38403153	38403153	8553170	7	65,149,135,206,78,1559,338,	0,184,406,1754,2190,2365,5597,
#Partially deleted in new
chr19	38403168	38404996	chr19:38403168-38404996	0	+	38403168	38404996	789624	3	318,135,89,	0,391,1739,
#Partially deleted in new
chr19	38403186	38404996	chr19:38403186-38404996	0	+	38403186	38403474	789624	3	32,357,89,	0,151,1721,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	38403337	38409083	chr19:38403337-38409083	0	+	38403337	38403337	8553170	5	149,135,206,78,3565,	0,222,1570,2006,2181,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	38405253	38405908	chr19:38405253-38405908	0	+	38405253	38405253	8553170	2	168,390,	0,265,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	38406743	38409086	chr19:38406743-38409086	0	+	38406743	38406743	8553170	2	334,336,	0,2007,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	38409050	38426197	chr19:38409050-38426197	0	-	38409050	38409050	8553170	13	1046,724,403,367,81,276,117,174,403,62,107,185,129,	0,1835,3363,3880,4343,5797,8001,9340,10809,11857,12043,12918,17018,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr19	38409054	38426187	chr19:38409054-38426187	1	-	38410039	38426091	0	17	1042,113,135,37,145,119,105,81,276,117,174,112,132,63,106,185,119,	0,1831,2060,2290,3617,3876,4138,4339,5793,7997,9336,10805,11076,11853,12040,12914,17014,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	38409056	38417147	chr19:38409056-38417147	0	-	38409056	38409056	8553170	9	1040,113,135,37,145,367,81,276,96,	0,1829,2058,2288,3615,3874,4337,5791,7995,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr19	38409057	38426305	chr19:38409057-38426305	1	-	38410039	38426091	0	17	1039,113,135,37,145,119,105,81,276,117,72,154,132,63,106,185,237,	0,1828,2057,2287,3614,3873,4135,4336,5790,7994,9333,10802,11073,11850,12037,12911,17011,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr19	38409057	38426305	chr19:38409057-38426305	1	-	38410039	38426091	0	17	1039,113,135,37,145,119,105,81,69,117,174,154,132,63,106,185,237,	0,1828,2057,2287,3614,3873,4135,4336,5790,7994,9333,10802,11073,11850,12037,12911,17011,
#Partially deleted in new
chr19	38409057	38426305	chr19:38409057-38426305	0	-	38409057	38409057	8553170	17	313,142,113,135,37,145,119,105,81,276,115,174,403,62,107,185,237,	0,897,1828,2057,2287,3614,3873,4135,4336,5790,7994,9333,10802,11850,12036,12911,17011,
#Partially deleted in new
chr19	38409057	38426305	chr19:38409057-38426305	0	-	38410039	38426091	0	18	313,142,113,135,37,145,119,105,81,276,117,174,154,132,62,107,185,237,	0,897,1828,2057,2287,3614,3873,4135,4336,5790,7994,9333,10802,11073,11850,12036,12911,17011,
#Partially deleted in new
chr19	38409057	38426305	chr19:38409057-38426305	0	-	38410039	38426091	0	18	313,142,113,135,37,145,119,105,81,276,117,174,112,132,62,107,185,237,	0,897,1828,2057,2287,3614,3873,4135,4336,5790,7994,9333,10802,11073,11850,12036,12911,17011,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr19	38409057	38426305	chr19:38409057-38426305	0	-	38409057	38409057	8553170	16	1039,113,267,145,119,105,81,276,117,174,154,132,62,107,185,237,	0,1828,2057,3614,3873,4135,4336,5790,7994,9333,10802,11073,11850,12036,12911,17011,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr19	38409057	38426305	chr19:38409057-38426305	1	-	38410039	38426091	0	16	1039,113,135,37,145,119,105,81,117,174,154,132,62,107,185,237,	0,1828,2057,2287,3614,3873,4135,4336,7994,9333,10802,11073,11850,12036,12911,17011,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	38409057	38426305	chr19:38409057-38426305	1	-	38410039	38426091	0	15	1039,113,135,37,145,119,105,81,276,154,132,62,107,185,237,	0,1828,2057,2287,3614,3873,4135,4336,5790,10802,11073,11850,12036,12911,17011,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr19	38409057	38426305	chr19:38409057-38426305	1	-	38411207	38426091	789624	16	1039,113,267,145,119,105,81,276,117,174,154,132,63,106,185,237,	0,1828,2057,3614,3873,4135,4336,5790,7994,9333,10802,11073,11850,12037,12911,17011,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	38409057	38426305	chr19:38409057-38426305	1	-	38410039	38426091	0	14	1039,113,135,37,145,119,105,81,154,132,62,107,185,237,	0,1828,2057,2287,3614,3873,4135,4336,10802,11073,11850,12036,12911,17011,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	38409058	38426305	chr19:38409058-38426305	1	-	38410039	38426091	0	15	1038,113,135,37,145,119,105,81,276,154,132,63,106,185,237,	0,1827,2056,2286,3613,3872,4134,4335,5789,10801,11072,11849,12036,12910,17010,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	38409058	38426305	chr19:38409058-38426305	1	-	38410039	38426091	0	14	1038,113,135,37,145,119,105,81,154,132,63,106,185,237,	0,1827,2056,2286,3613,3872,4134,4335,10801,11072,11849,12036,12910,17010,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr19	38409058	38426305	chr19:38409058-38426305	1	-	38410039	38426091	0	16	1038,113,135,37,145,119,105,81,117,174,154,132,63,106,185,237,	0,1827,2056,2286,3613,3872,4134,4335,7993,9332,10801,11072,11849,12036,12910,17010,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr19	38409058	38426305	chr19:38409058-38426305	3	-	38410039	38426091	0	17	1038,113,135,37,145,119,105,81,276,117,174,154,132,63,106,185,237,	0,1827,2056,2286,3613,3872,4134,4335,5789,7993,9332,10801,11072,11849,12036,12910,17010,
#Partially deleted in new
chr19	38409114	38411396	chr19:38409114-38411396	0	-	38409114	38409114	8553170	4	256,142,113,282,	0,840,1771,2000,
#Partially deleted in new
chr19	38409839	38426162	chr19:38409839-38426162	1	-	38410039	38426091	0	17	257,113,135,37,145,119,105,81,276,117,174,154,132,62,107,185,94,	0,1046,1275,1505,2832,3091,3353,3554,5008,7212,8551,10020,10291,11068,11254,12129,16229,
#Partially deleted in new
chr19	38412414	38426197	chr19:38412414-38426197	0	-	38412414	38412414	8553170	11	402,367,81,276,117,174,403,62,107,185,129,	0,516,979,2433,4637,5976,7445,8493,8679,9554,13654,
#Partially deleted in new
chr19	38433698	38587564	chr19:38433698-38587564	1	+	38433829	38587420	789624	105	176,120,105,75,79,113,94,94,75,157,165,122,196,136,96,119,134,242,193,217,105,104,84,308,203,175,209,395,133,161,166,87,227,613,267,201,112,147,274,115,133,95,136,187,109,121,170,221,91,141,164,79,90,141,75,76,124,116,68,122,50,61,239,82,131,333,241,88,93,171,60,138,113,97,107,52,66,100,80,77,74,18,81,89,129,105,82,188,342,813,77,145,87,252,131,43,131,61,147,135,157,65,101,52,240,	0,7046,8650,9859,10019,10450,10885,12773,12995,14656,14950,18065,19120,21536,21752,21934,23798,24352,25447,26676,29724,30048,30940,32392,33911,35267,35606,39678,41619,44011,44736,49328,49591,51891,55478,56377,56922,58791,60653,62516,62710,63161,65409,65936,66209,66907,67122,68808,69181,70521,71049,71304,71610,72107,72604,72772,73130,74013,76799,76961,77862,78373,78546,81327,82388,83660,85515,89329,89518,91633,93294,93948,94607,94900,95252,98791,98972,101021,101442,101617,102298,103051,104181,109648,109833,110072,112746,114534,127414,131260,133212,134074,136908,138320,139478,142220,144219,144445,146283,146671,151244,152239,152392,152826,153626,
#Partially deleted in new
chr19	38433829	38587420	chr19:38433829-38587420	3	+	38433829	38587420	789624	106	45,120,105,75,79,113,94,94,75,157,165,122,196,136,96,119,134,242,193,217,105,104,84,308,203,175,209,395,133,161,166,87,227,613,267,201,112,147,274,115,133,95,136,187,109,121,170,221,91,141,164,79,90,141,75,76,124,116,68,122,50,61,239,82,131,333,241,88,93,15,171,60,138,113,97,107,52,66,100,80,77,74,18,81,89,129,105,82,188,342,813,77,145,87,252,131,43,131,61,147,135,157,65,101,52,96,	0,6915,8519,9728,9888,10319,10754,12642,12864,14525,14819,17934,18989,21405,21621,21803,23667,24221,25316,26545,29593,29917,30809,32261,33780,35136,35475,39547,41488,43880,44605,49197,49460,51760,55347,56246,56791,58660,60522,62385,62579,63030,65278,65805,66078,66776,66991,68677,69050,70390,70918,71173,71479,71976,72473,72641,72999,73882,76668,76830,77731,78242,78415,81196,82257,83529,85384,89198,89387,90085,91502,93163,93817,94476,94769,95121,98660,98841,100890,101311,101486,102167,102920,104050,109517,109702,109941,112615,114403,127283,131129,133081,133943,136777,138189,139347,142089,144088,144314,146152,146540,151113,152108,152261,152695,153495,
#Partially deleted in new
chr19	38466127	38467886	chr19:38466127-38467886	0	+	38466127	38466127	8553170	2	271,277,	0,1482,
#Partially deleted in new
chr19	38496214	38565228	chr19:38496214-38565228	0	+	38496214	38512268	789624	49	115,133,95,136,187,109,121,170,221,91,141,164,79,90,141,75,76,124,116,68,122,61,239,82,131,333,241,88,93,171,60,138,113,97,107,52,66,100,80,77,74,81,89,129,105,82,188,342,270,	0,194,645,2893,3420,3693,4391,4606,6292,6665,8005,8533,8788,9094,9591,10088,10256,10614,11497,14283,14445,15857,16030,18811,19872,21144,22999,26813,27002,29117,30778,31432,32091,32384,32736,36275,36456,38505,38926,39101,39782,41665,47132,47317,47556,50230,52018,64898,68744,
#Partially deleted in new
chr19	38511570	38535174	chr19:38511570-38535174	0	+	38511570	38535174	789624	19	40,239,82,131,333,241,88,93,15,171,60,138,113,97,107,52,66,100,34,	0,674,3455,4516,5788,7643,11457,11646,12344,13761,15422,16076,16735,17028,17380,20919,21100,23149,23570,
#Deleted in new
chr19	38523066	38523588	chr19:38523066-38523588	0	+	38523066	38523066	8553170	2	49,372,	0,150,
#Partially deleted in new
chr19	38526953	38528555	chr19:38526953-38528555	3	-	38526953	38526953	8553170	3	114,221,235,	0,601,1367,
#Partially deleted in new
chr19	38528089	38536062	chr19:38528089-38536062	0	+	38528089	38536062	789624	10	105,113,97,107,52,66,100,80,77,66,	0,216,509,861,4400,4581,6630,7051,7226,7907,
#Partially deleted in new
chr19	38534731	38538673	chr19:38534731-38538673	0	+	38534731	38538673	789624	6	88,80,77,74,81,115,	0,409,584,1265,3148,3827,
#Partially deleted in new
chr19	38534759	38548372	chr19:38534759-38548372	0	+	38534759	38537901	789624	9	60,80,77,81,89,129,105,82,140,	0,381,556,3120,8587,8772,9011,11685,13473,
#Deleted in new
chr19	38535516	38537128	chr19:38535516-38537128	3	-	38535516	38535516	8553170	2	418,134,	0,1478,
#Partially deleted in new
chr19	38566926	38572244	chr19:38566926-38572244	0	+	38566926	38572244	789624	3	61,145,226,	0,846,5092,
#Partially deleted in new
chr19	38587643	38617966	chr19:38587643-38617966	1	-	38587747	38617895	789624	16	174,56,59,76,117,82,63,132,73,43,48,56,65,91,58,170,	0,5638,7841,21955,22265,23407,23599,24967,26236,26399,26601,26746,28551,29710,29924,30153,
#Partially deleted in new
chr19	38587645	38618882	chr19:38587645-38618882	1	-	38587747	38618784	789624	32	172,56,71,90,63,175,104,59,109,61,77,85,83,163,43,48,44,59,79,117,82,63,132,73,43,48,56,65,91,58,67,118,	0,5636,7839,7994,8293,8666,9388,9680,9840,12279,12431,13795,17763,17922,18527,20218,20344,20466,21950,22263,23405,23597,24965,26234,26397,26599,26744,28549,29708,29922,30151,31119,
#Partially deleted in new
chr19	38587668	38618003	chr19:38587668-38618003	3	-	38587747	38617895	789624	31	149,56,71,90,63,175,104,59,109,61,77,85,83,163,43,48,44,59,79,117,82,63,132,73,43,48,56,65,91,58,207,	0,5613,7816,7971,8270,8643,9365,9657,9817,12256,12408,13772,17740,17899,18504,20195,20321,20443,21927,22240,23382,23574,24942,26211,26374,26576,26721,28526,29685,29899,30128,
#Partially deleted in new
chr19	38587673	38593369	chr19:38587673-38593369	0	-	38587673	38587673	8553170	2	144,88,	0,5608,
#Partially deleted in new
chr19	38587699	38609634	chr19:38587699-38609634	0	-	38587747	38609634	789624	18	118,56,71,90,63,175,104,59,109,61,77,85,83,163,43,170,59,39,	0,5582,7785,7940,8239,8612,9334,9626,9786,12225,12377,13741,17709,17868,18473,20164,20412,21896,
#Partially deleted in new
chr19	38593270	38597093	chr19:38593270-38597093	0	-	38593270	38593270	8553170	5	67,245,63,175,60,	0,2214,2668,3041,3763,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	38596345	38601694	chr19:38596345-38601694	3	+	38596345	38596345	789624	3	91,143,282,	0,907,5067,
#Partially deleted in new
chr19	38597347	38613927	chr19:38597347-38613927	0	-	38609997	38613927	789624	13	247,77,85,83,163,43,48,44,59,79,117,132,48,	0,2729,4093,8061,8220,8825,10516,10642,10764,12248,12561,15263,16532,
#Partially deleted in new
chr19	38606185	38613927	chr19:38606185-38613927	0	-	38606185	38606185	8553170	8	30,48,44,59,79,117,132,48,	0,1678,1804,1926,3410,3723,6425,7694,
#Partially deleted in new
chr19	38611088	38614477	chr19:38611088-38614477	0	-	38611088	38611088	8553170	6	44,63,132,73,43,233,	0,154,1522,2791,2954,3156,
#Partially deleted in new
chr19	38611099	38614498	chr19:38611099-38614498	0	-	38611099	38611099	8553170	5	33,63,132,73,456,	0,143,1511,2780,2943,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	38614042	38614873	chr19:38614042-38614873	0	-	38614042	38614042	8553170	3	43,48,484,	0,202,347,
#Partially deleted in new
chr19	38614066	38617845	chr19:38614066-38617845	0	-	38614066	38614066	8553170	6	226,56,65,91,58,49,	0,323,2128,3287,3501,3730,
#Partially deleted in new
chr19	38616177	38617969	chr19:38616177-38617969	0	-	38616177	38616177	8553170	4	82,91,58,173,	0,1176,1390,1619,
#Partially deleted in new
chr19	38619081	38636955	chr19:38619081-38636955	1	+	38619268	38636920	789624	7	246,121,75,67,78,126,67,	0,4995,6946,13348,13519,15911,17807,
#Partially deleted in new
chr19	38619094	38636953	chr19:38619094-38636953	1	+	38624179	38636920	789624	8	129,99,121,75,67,78,126,65,	0,1242,4982,6933,13335,13506,15898,17794,
#Partially deleted in new
chr19	38619096	38636955	chr19:38619096-38636955	3	+	38619268	38636920	0	8	231,99,121,75,67,78,126,67,	0,1240,4980,6931,13333,13504,15896,17792,
#Partially deleted in new
chr19	38619185	38635485	chr19:38619185-38635485	1	+	38624179	38635129	789624	6	132,121,75,67,78,493,	0,4891,6842,13244,13415,15807,
#Partially deleted in new
chr19	38619185	38626332	chr19:38619185-38626332	0	+	38619185	38619185	8553170	4	142,99,121,305,	0,1151,4891,6842,
#Partially deleted in new
chr19	38619185	38636952	chr19:38619185-38636952	1	+	38619268	38636948	789624	5	142,99,121,75,64,	0,1151,4891,6842,17703,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	38619185	38630968	chr19:38619185-38630968	0	+	38619185	38619185	8553170	5	142,99,121,75,267,	0,1151,4891,6842,11516,
#Partially deleted in new
chr19	38619192	38635744	chr19:38619192-38635744	1	+	38619268	38635129	0	7	135,99,121,75,67,78,752,	0,1144,4884,6835,13237,13408,15800,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	38619195	38628568	chr19:38619195-38628568	0	+	38619195	38619195	8553170	5	132,99,121,75,66,	0,1141,4881,6832,9307,
#Partially deleted in new
chr19	38619195	38626192	chr19:38619195-38626192	0	+	38619195	38619195	8553170	4	122,99,121,165,	0,1141,4881,6832,
#Partially deleted in new
chr19	38619195	38635102	chr19:38619195-38635102	0	+	38619268	38635102	789624	6	132,121,75,67,78,110,	0,4881,6832,13234,13405,15797,
#Partially deleted in new
chr19	38619210	38636953	chr19:38619210-38636953	1	+	38619268	38636920	789624	7	117,99,121,75,67,126,65,	0,1126,4866,6817,13219,15782,17678,
#Partially deleted in new
chr19	38626049	38632900	chr19:38626049-38632900	0	+	38626049	38626049	8553170	2	53,471,	0,6380,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	38632025	38636924	chr19:38632025-38636924	0	+	38632025	38632025	8553170	4	471,78,126,36,	0,575,2967,4863,
#Partially deleted in new
chr19	38647648	38721878	chr19:38647648-38721878	0	+	38647648	38647648	8553170	12	259,115,120,87,88,79,82,86,93,231,148,341,	0,52951,53353,57285,58395,60468,61746,62608,66820,69437,70278,73889,
#Partially deleted in new
chr19	38647669	38731583	chr19:38647669-38731583	3	+	38647745	38729432	0	21	238,115,120,87,88,79,82,86,93,231,148,151,109,141,183,135,180,147,81,159,2310,	0,52930,53332,57264,58374,60447,61725,62587,66799,69416,70257,73868,75944,76267,76487,76761,78054,79287,80276,81326,81604,
#Partially deleted in new
chr19	38647737	38729447	chr19:38647737-38729447	1	+	38647745	38729432	0	14	170,93,231,148,151,109,141,183,135,180,147,81,159,174,	0,66731,69348,70189,73800,75876,76199,76419,76693,77986,79219,80208,81258,81536,
#Partially deleted in new
chr19	38647737	38730144	chr19:38647737-38730144	0	+	38647737	38730020	789624	3	170,115,156,	0,52862,82251,
#Partially deleted in new
chr19	38647745	38729432	chr19:38647745-38729432	1	+	38647745	38729432	789624	11	162,110,109,141,183,135,180,147,81,159,159,	0,52854,75868,76191,76411,76685,77978,79211,80200,81250,81528,
#Partially deleted in new
chr19	38648192	38709423	chr19:38648192-38709423	0	+	38648192	38648192	8553170	7	68,115,120,87,88,79,29,	0,52407,52809,56741,57851,59924,61202,
#Partially deleted in new
chr19	38683872	38693606	chr19:38683872-38693606	3	-	38683872	38683872	8553170	2	136,106,	0,9628,
#Partially deleted in new
chr19	38708141	38717316	chr19:38708141-38717316	0	+	38708141	38717316	789624	5	54,82,86,93,231,	0,1253,3134,6327,8944,
#Partially deleted in new
chr19	38710832	38717117	chr19:38710832-38717117	0	+	38710832	38710832	8553170	3	529,93,32,	0,3636,6253,
#Partially deleted in new
chr19	38724156	38731583	chr19:38724156-38731583	0	+	38724156	38729432	789624	7	183,135,180,147,66,159,2310,	0,274,1567,2800,4159,4839,5117,
#Deleted in new
chr19	38727855	38729820	chr19:38727855-38729820	0	+	38727855	38727855	8553170	3	171,159,547,	0,1140,1418,
#Deleted in new
chr19	38728144	38729421	chr19:38728144-38729421	0	+	38728144	38728144	8553170	3	237,159,148,	0,851,1129,
#Partially deleted in new
chr19	38730186	38735410	chr19:38730186-38735410	0	-	38733770	38735410	789624	6	692,59,117,79,58,41,	0,778,920,3516,4626,5183,
#Partially deleted in new
chr19	38730273	38735405	chr19:38730273-38735405	0	-	38730851	38735405	789624	5	605,59,117,79,36,	0,691,833,3429,5096,
#Partially deleted in new
chr19	38730430	38769904	chr19:38730430-38769904	1	-	38730851	38741889	789624	20	448,59,117,79,63,71,58,60,43,209,12,233,164,75,86,75,169,134,119,107,	0,534,676,3272,3711,3888,4382,4939,5071,5679,6121,6725,7044,7842,7987,8143,9620,11346,11979,39367,
#Partially deleted in new
chr19	38730457	38735677	chr19:38730457-38735677	0	-	38730457	38730457	8553170	7	421,59,117,79,63,71,308,	0,507,649,3245,3684,3861,4912,
#Partially deleted in new
chr19	38730533	38736991	chr19:38730533-38736991	0	-	38730533	38730533	8553170	9	345,59,117,238,63,552,175,209,440,	0,431,573,3169,3608,3785,4836,5576,6018,
#Partially deleted in new
chr19	38730558	38744474	chr19:38730558-38744474	3	-	38730851	38744165	789624	21	320,59,117,79,63,71,58,60,43,209,12,233,164,75,86,75,169,134,119,70,546,	0,406,548,3144,3583,3760,4254,4811,4943,5551,5993,6597,6916,7714,7859,8015,9492,11218,11851,12474,13370,
#Partially deleted in new
chr19	38730677	38735422	chr19:38730677-38735422	0	-	38730851	38735422	789624	5	201,59,117,58,53,	0,287,429,4135,4692,
#Partially deleted in new
chr19	38731167	38735624	chr19:38731167-38735624	0	-	38731167	38731167	8553170	5	56,79,71,58,255,	0,2535,3151,3645,4202,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	38733120	38735672	chr19:38733120-38735672	0	-	38733120	38733120	8553170	1	2552,	0,
#Deleted in new
chr19	38734565	38735662	chr19:38734565-38735662	0	-	38734565	38734565	8553170	3	305,60,161,	0,804,936,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	38738283	38739863	chr19:38738283-38739863	3	+	38738283	38738283	8553170	1	1580,	0,
#Partially deleted in new
chr19	38741776	38744172	chr19:38741776-38744172	0	-	38741776	38744165	789624	4	134,98,70,244,	0,633,1256,2152,
#Partially deleted in new
chr19	38770970	38773492	chr19:38770970-38773492	3	-	38771025	38773492	0	4	169,202,89,6,	0,858,2044,2516,
#Partially deleted in new
chr19	38771883	38773432	chr19:38771883-38773432	0	-	38771883	38771989	789624	2	147,418,	0,1131,
#Partially deleted in new
chr19	38789210	38791749	chr19:38789210-38791749	3	+	38789226	38791693	0	4	22,89,202,170,	0,405,1478,2369,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	38790527	38791748	chr19:38790527-38791748	0	+	38790527	38790527	8553170	2	363,169,	0,1052,
#Partially deleted in new
chr19	38801670	38806507	chr19:38801670-38806507	0	-	38803600	38806507	789624	5	240,166,89,149,47,	0,321,645,1851,4790,
#Partially deleted in new
chr19	38801678	38813364	chr19:38801678-38813364	3	-	38801763	38812886	0	10	232,166,89,30,39,27,135,205,89,523,	0,313,637,1843,2063,2190,4782,7065,10752,11163,
#Partially deleted in new
chr19	38801758	38808805	chr19:38801758-38808805	0	-	38801763	38808805	789624	7	152,166,89,30,27,135,62,	0,233,557,1763,2110,4702,6985,
#Partially deleted in new
chr19	38801882	38803651	chr19:38801882-38803651	0	-	38801882	38801882	8553170	4	28,166,89,130,	0,109,433,1639,
#Partially deleted in new
chr19	38802342	38812945	chr19:38802342-38812945	0	-	38802342	38802342	8553170	6	62,374,135,205,89,104,	0,1179,4118,6401,10088,10499,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	38803019	38812881	chr19:38803019-38812881	0	-	38803019	38803019	8553170	5	876,135,205,89,40,	0,3441,5724,9411,9822,
#Partially deleted in new
chr19	38803656	38808948	chr19:38803656-38808948	0	-	38803656	38803656	8553170	4	124,27,135,205,	0,212,2804,5087,
#Partially deleted in new
chr19	38806460	38812945	chr19:38806460-38812945	0	-	38806460	38806460	8553170	3	135,89,104,	0,5970,6381,
#Partially deleted in new
chr19	38808897	38812945	chr19:38808897-38812945	0	-	38808897	38812474	789624	2	51,515,	0,3533,
#Partially deleted in new
chr19	38815421	38832005	chr19:38815421-38832005	3	-	38815612	38831772	0	10	296,151,72,71,65,49,125,89,208,285,	0,435,862,1031,1643,1894,2029,15656,15887,16299,
#Partially deleted in new
chr19	38815421	38816270	chr19:38815421-38816270	0	-	38815421	38815421	8553170	2	296,414,	0,435,
#Partially deleted in new
chr19	38815482	38817364	chr19:38815482-38817364	0	-	38815482	38815482	8553170	5	235,499,71,65,49,	0,374,970,1582,1833,
#Partially deleted in new
chr19	38815856	38831761	chr19:38815856-38831761	0	-	38815856	38831761	789624	8	151,71,65,49,125,89,208,41,	0,596,1208,1459,1594,15221,15452,15864,
#Partially deleted in new
chr19	38816135	38831775	chr19:38816135-38831775	0	-	38816135	38816135	8553170	8	220,71,65,49,125,89,208,55,	0,317,929,1180,1315,14942,15173,15585,
#Partially deleted in new
chr19	38816469	38831782	chr19:38816469-38831782	0	-	38831479	38831772	789624	7	54,65,49,125,89,208,87,	0,595,846,981,14608,14839,15226,
#Partially deleted in new
chr19	38816934	38831789	chr19:38816934-38831789	0	-	38816934	38816934	8553170	4	641,89,208,69,	0,14143,14374,14786,
#Partially deleted in new
chr19	38817021	38831841	chr19:38817021-38831841	0	-	38817021	38817021	8553170	5	108,260,89,208,121,	0,294,14056,14287,14699,
#Partially deleted in new
chr19	38817267	38831754	chr19:38817267-38831754	0	-	38817267	38817267	8553170	5	97,125,89,208,34,	0,183,13810,14041,14453,
#Partially deleted in new
chr19	38817295	38831789	chr19:38817295-38831789	0	-	38817295	38831772	789624	5	69,125,89,208,69,	0,155,13782,14013,14425,
#Partially deleted in new
chr19	38817470	38840178	chr19:38817470-38840178	3	-	38817470	38840178	789624	8	105,89,208,96,58,202,122,83,	0,13607,13838,19913,20123,20926,21423,22625,
#Partially deleted in new
chr19	38817470	38840178	chr19:38817470-38840178	0	-	38817470	38840178	789624	4	105,96,58,83,	0,19913,20123,22625,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	38820165	38823223	chr19:38820165-38823223	3	+	38820165	38820165	8553170	2	327,239,	0,2819,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	38830903	38831412	chr19:38830903-38831412	0	-	38830903	38830903	8553170	2	263,93,	0,416,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	38830903	38831388	chr19:38830903-38831388	0	-	38830903	38830903	8553170	2	263,80,	0,405,
#Partially deleted in new
chr19	38831077	38831775	chr19:38831077-38831775	0	-	38831077	38831772	789624	2	89,80,	0,618,
#Partially deleted in new
chr19	38831077	38831766	chr19:38831077-38831766	0	-	38831077	38831077	8553170	2	89,46,	0,643,
#Partially deleted in new
chr19	38831077	38831659	chr19:38831077-38831659	0	-	38831077	38831328	789624	2	89,351,	0,231,
#Partially deleted in new
chr19	38831134	38831674	chr19:38831134-38831674	0	-	38831134	38831328	789624	3	32,208,68,	0,174,472,
#Partially deleted in new
chr19	38831449	38831748	chr19:38831449-38831748	0	-	38831449	38831748	789624	2	67,142,	0,157,
#Partially deleted in new
chr19	38836387	38850333	chr19:38836387-38850333	3	-	38836721	38849966	0	13	393,96,58,202,122,281,72,73,97,86,238,119,634,	0,996,1206,2009,2506,3708,4100,7454,7620,9262,9465,10928,13312,
#Partially deleted in new
chr19	38836387	38847434	chr19:38836387-38847434	0	-	38836721	38847434	8553170	11	393,96,58,202,122,464,73,97,86,238,119,	0,996,1206,2009,2506,3708,7454,7620,9262,9465,10928,
#Deleted in new
chr19	38836388	38839664	chr19:38836388-38839664	0	-	38836388	38836388	8553170	4	1091,58,202,771,	0,1205,2008,2505,
#Partially deleted in new
chr19	38836394	38852347	chr19:38836394-38852347	0	-	38841623	38846077	789624	14	386,96,58,202,122,281,72,70,73,97,86,238,119,52,	0,989,1199,2002,2499,3701,4093,5218,7447,7613,9255,9458,10921,15901,
#Deleted in new
chr19	38836394	38837585	chr19:38836394-38837585	0	-	38836394	38836394	8553170	2	386,202,	0,989,
#Partially deleted in new
chr19	38836394	38851155	chr19:38836394-38851155	0	-	38836721	38851155	789624	13	386,96,58,202,122,281,72,73,97,86,238,119,88,	0,989,1199,2002,2499,3701,4093,7447,7613,9255,9458,10921,14673,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	38836397	38841749	chr19:38836397-38841749	0	-	38836397	38836397	8553170	7	383,96,58,202,122,281,1262,	0,986,1196,1999,2496,3698,4090,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	38836397	38842328	chr19:38836397-38842328	0	-	38836397	38836397	8553170	6	383,96,58,202,122,2233,	0,986,1196,1999,2496,3698,
#Partially deleted in new
chr19	38836634	38852338	chr19:38836634-38852338	1	-	38836721	38846077	0	13	146,96,58,202,122,281,72,73,97,86,238,119,43,	0,749,959,1762,2259,3461,3853,7207,7373,9015,9218,10681,15661,
#Deleted in new
chr19	38838651	38840178	chr19:38838651-38840178	0	-	38838651	38838651	8553170	2	364,83,	0,1444,
#Partially deleted in new
chr19	38840302	38852325	chr19:38840302-38852325	0	-	38840302	38840302	8553170	7	257,73,97,86,238,119,30,	0,3539,3705,5347,5550,7013,11993,
#Partially deleted in new
chr19	38843370	38852338	chr19:38843370-38852338	0	-	38843370	38843370	8553170	6	544,97,86,238,119,43,	0,637,2279,2482,3945,8925,
#Partially deleted in new
chr19	38843856	38849368	chr19:38843856-38849368	0	-	38843856	38849368	789624	6	58,97,86,238,119,61,	0,151,1793,1996,3459,5451,
#Partially deleted in new
chr19	38844024	38849940	chr19:38844024-38849940	0	-	38844024	38849940	789624	5	80,86,238,119,70,	0,1625,1828,3291,5846,
#Partially deleted in new
chr19	38845666	38847632	chr19:38845666-38847632	0	-	38845666	38845666	8553170	3	69,238,317,	0,186,1649,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	38867833	38870043	chr19:38867833-38870043	0	-	38869123	38870043	789624	3	1577,132,101,	0,1739,2109,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	38868981	38878257	chr19:38868981-38878257	0	-	38868981	38868981	8553170	9	185,164,132,318,423,793,160,89,26,	0,265,591,961,1588,2096,7349,7711,9250,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	38868981	38878279	chr19:38868981-38878279	1	-	38869103	38876742	789624	12	185,164,132,318,423,150,65,73,103,160,89,48,	0,265,591,961,1588,2096,2665,2816,4904,7349,7711,9250,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	38868981	38876781	chr19:38868981-38876781	3	-	38869103	38871841	789624	11	185,164,132,318,423,150,65,73,103,144,89,	0,265,591,961,1588,2096,2665,2816,4904,7349,7711,
#Deleted in new
chr19	38869230	38869925	chr19:38869230-38869925	0	-	38869230	38869230	8553170	2	180,353,	0,342,
#Deleted in new
chr19	38869283	38869921	chr19:38869283-38869921	0	-	38869283	38869609	789624	3	127,132,87,	0,289,551,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	38870158	38873763	chr19:38870158-38873763	3	+	38870158	38870158	8553170	3	122,169,213,	0,487,3392,
#Deleted in new
chr19	38870569	38870851	chr19:38870569-38870851	0	-	38870569	38870569	8553170	2	82,104,	0,178,
#Partially deleted in new
chr19	38871465	38878266	chr19:38871465-38878266	0	-	38871465	38871465	8553170	3	405,103,35,	0,2420,6766,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	38873750	38878264	chr19:38873750-38878264	0	-	38873750	38873750	8553170	4	238,144,89,33,	0,2580,2942,4481,
#Partially deleted in new
chr19	38873885	38878273	chr19:38873885-38878273	0	-	38873885	38873885	8553170	3	103,451,42,	0,2445,4346,
#Partially deleted in new
chr19	38878554	38899862	chr19:38878554-38899862	1	-	38879479	38893819	789624	13	756,67,48,56,60,130,69,57,107,42,114,49,357,	0,879,2295,2545,2877,5072,10532,11134,11300,11548,14859,15264,20951,
#Partially deleted in new
chr19	38878556	38899823	chr19:38878556-38899823	3	-	38879154	38899521	0	16	754,67,71,52,77,56,60,130,69,57,107,42,114,49,47,318,	0,877,1075,2128,2264,2543,2875,5070,10530,11132,11298,11546,14857,15262,19822,20949,
#Partially deleted in new
chr19	38878556	38899862	chr19:38878556-38899862	1	-	38879154	38893819	0	15	754,67,71,52,77,56,60,130,69,57,107,42,114,49,357,	0,877,1075,2128,2264,2543,2875,5070,10530,11132,11298,11546,14857,15262,20949,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	38878556	38894410	chr19:38878556-38894410	0	-	38878556	38878556	789624	13	754,67,71,52,77,56,60,130,69,57,107,42,997,	0,877,1075,2128,2264,2543,2875,5070,10530,11132,11298,11546,14857,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	38878556	38894108	chr19:38878556-38894108	0	-	38878556	38878556	8553170	5	2180,671,130,1058,695,	0,2264,5070,10530,14857,
#Partially deleted in new
chr19	38879107	38894873	chr19:38879107-38894873	1	-	38879107	38894873	789624	16	150,51,67,71,52,77,56,60,130,69,57,107,42,114,49,18,	0,152,326,524,1577,1713,1992,2324,4519,9979,10581,10747,10995,14306,14711,15748,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	38879293	38880153	chr19:38879293-38880153	0	-	38879293	38879293	8553170	3	17,67,522,	0,140,338,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	38880820	38899823	chr19:38880820-38899823	0	-	38880820	38893819	789624	13	77,56,60,130,69,57,107,42,114,49,47,125,318,	0,279,611,2806,8266,8868,9034,9282,12593,12998,17558,17973,18685,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	38881099	38899678	chr19:38881099-38899678	0	-	38889308	38893819	789624	11	56,60,130,69,70,57,107,42,114,49,173,	0,332,2527,7987,8154,8589,8755,9003,12314,12719,18406,
#Partially deleted in new
chr19	38881431	38899711	chr19:38881431-38899711	0	-	38893452	38899521	789624	10	60,130,69,57,107,42,114,153,47,206,	0,2195,7655,8257,8423,8671,11982,12387,16947,18074,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	38883638	38899714	chr19:38883638-38899714	0	-	38883638	38893819	789624	9	118,69,57,107,42,114,49,125,209,	0,5448,6050,6216,6464,9775,10180,15155,15867,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	38889086	38894277	chr19:38889086-38894277	0	-	38889086	38893819	789624	6	69,57,107,42,114,459,	0,602,768,1016,4327,4732,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	38889168	38899600	chr19:38889168-38899600	0	-	38889168	38889168	8553170	7	155,57,107,42,114,49,95,	0,520,686,934,4245,4650,10337,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	38889230	38899518	chr19:38889230-38899518	0	-	38889230	38889230	8553170	6	93,273,42,114,49,13,	0,458,872,4183,4588,10275,
#Partially deleted in new
chr19	38889859	38899581	chr19:38889859-38899581	0	-	38891922	38893819	789624	6	102,42,173,114,49,76,	0,243,1934,3554,3959,9646,
#Partially deleted in new
chr19	38889882	38899645	chr19:38889882-38899645	0	-	38889882	38893819	789624	5	79,42,114,180,140,	0,220,3531,3936,9623,
#Partially deleted in new
chr19	38889898	38899711	chr19:38889898-38899711	0	-	38889898	38893819	789624	5	63,42,114,153,206,	0,204,3515,3920,9607,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	38898379	38899588	chr19:38898379-38899588	0	-	38898379	38898379	8553170	2	535,83,	0,1126,
#Partially deleted in new
chr19	38899699	38908891	chr19:38899699-38908891	1	+	38905093	38908832	789624	6	40,106,334,89,261,161,	0,5315,5502,7521,7699,9031,
#Partially deleted in new
chr19	38899699	38907649	chr19:38899699-38907649	0	+	38905093	38907649	789624	5	40,106,334,89,251,	0,5315,5502,7521,7699,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	38899951	38908538	chr19:38899951-38908538	1	+	38900032	38907707	789624	5	260,106,334,89,1140,	0,5063,5250,7269,7447,
#Partially deleted in new
chr19	38899977	38907277	chr19:38899977-38907277	0	+	38900072	38907277	789624	4	102,50,334,57,	0,5093,5224,7243,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	38899979	38908893	chr19:38899979-38908893	0	+	38900032	38905089	789624	5	232,50,334,89,1495,	0,5091,5222,7241,7419,
#Partially deleted in new
chr19	38899998	38908886	chr19:38899998-38908886	3	+	38900032	38908832	789624	6	213,106,334,89,261,156,	0,5016,5203,7222,7400,8732,
#Partially deleted in new
chr19	38908979	38912158	chr19:38908979-38912158	3	-	38909235	38912158	789624	5	346,521,88,41,61,	0,1583,2586,2832,3118,
#Partially deleted in new
chr19	38908979	38910874	chr19:38908979-38910874	0	-	38909180	38910874	789624	3	210,48,312,	0,298,1583,
#Partially deleted in new
chr19	38915265	38930896	chr19:38915265-38930896	3	-	38915605	38930736	789624	16	484,66,93,94,110,88,46,109,48,106,64,55,141,30,96,427,	0,575,771,955,2458,2655,2828,3156,3500,4496,4820,6126,6261,6972,10939,15204,
#Deleted in new
chr19	38915265	38916046	chr19:38915265-38916046	0	-	38915265	38915265	8553170	2	484,206,	0,575,
#Partially deleted in new
chr19	38915268	38930133	chr19:38915268-38930133	1	-	38915605	38921410	789624	16	481,66,93,94,110,88,46,109,48,106,64,55,70,30,96,75,	0,572,768,952,2455,2652,2825,3153,3497,4493,4817,6123,6258,6969,10936,14790,
#Partially deleted in new
chr19	38915298	38930758	chr19:38915298-38930758	1	-	38915605	38930736	789624	16	451,66,93,94,104,94,46,109,48,106,64,55,141,30,96,289,	0,542,738,922,2425,2616,2795,3123,3467,4463,4787,6093,6228,6939,10906,15171,
#Partially deleted in new
chr19	38915317	38917827	chr19:38915317-38917827	1	-	38915418	38917827	789624	6	173,135,66,93,94,104,	0,297,523,719,903,2406,
#Partially deleted in new
chr19	38915403	38949855	chr19:38915403-38949855	3	-	38915605	38949855	789624	20	346,66,93,94,110,88,46,109,48,106,64,55,141,30,96,69,136,96,112,62,	0,437,633,817,2320,2517,2690,3018,3362,4358,4682,5988,6123,6834,10801,27279,29565,31068,33163,34390,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr19	38915563	38930761	chr19:38915563-38930761	1	-	38915605	38930736	789624	17	186,66,93,94,110,88,46,109,48,106,64,55,70,77,30,96,292,	0,277,473,657,2160,2357,2530,2858,3202,4198,4522,5828,5963,6438,6674,10641,14906,
#Partially deleted in new
chr19	38916207	38917924	chr19:38916207-38917924	0	-	38916207	38916207	8553170	2	107,201,	0,1516,
#Partially deleted in new
chr19	38917725	38930760	chr19:38917725-38930760	0	-	38918797	38930736	789624	11	108,88,46,109,48,106,55,141,30,96,291,	0,195,368,696,1040,2036,3666,3801,4512,8479,12744,
#Partially deleted in new
chr19	38917813	38919784	chr19:38917813-38919784	0	-	38917813	38917813	8553170	4	326,109,48,23,	0,608,952,1948,
#Partially deleted in new
chr19	38918036	38919999	chr19:38918036-38919999	0	-	38918036	38918036	8553170	4	103,109,48,238,	0,385,729,1725,
#Deleted in new
chr19	38919798	38921874	chr19:38919798-38921874	0	-	38919798	38919798	8553170	4	69,64,55,348,	0,287,1593,1728,
#Partially deleted in new
chr19	38921391	38930759	chr19:38921391-38930759	0	-	38921581	38930736	789624	5	55,70,30,96,290,	0,135,846,4813,9078,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	38921635	38930763	chr19:38921635-38930763	0	-	38921635	38921635	8553170	3	632,96,294,	0,4569,8834,
#Partially deleted in new
chr19	38930547	38933020	chr19:38930547-38933020	3	+	38931294	38932700	0	3	451,68,688,	0,728,1785,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	38930943	38931861	chr19:38930943-38931861	0	+	38930943	38930943	8553170	2	55,586,	0,332,
#Partially deleted in new
chr19	38930953	38933162	chr19:38930953-38933162	1	+	38931294	38932700	0	2	390,830,	0,1379,
#Partially deleted in new
chr19	38930998	38933020	chr19:38930998-38933020	1	+	38931294	38932700	0	3	173,68,688,	0,277,1334,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	38935296	38938632	chr19:38935296-38938632	3	-	38935296	38935296	8553170	1	3336,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	38941400	38975910	chr19:38941400-38975910	3	-	38942607	38950319	789624	6	1351,136,96,112,366,325,	0,3568,5071,7166,8570,34185,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	38942277	38952687	chr19:38942277-38952687	1	-	38942607	38950319	789624	6	474,136,96,112,366,115,	0,2691,4194,6289,7693,10295,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	38942277	38946716	chr19:38942277-38946716	0	-	38942277	38942277	8553170	2	474,1748,	0,2691,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	38942530	38947046	chr19:38942530-38947046	0	-	38942530	38942530	8553170	3	221,136,575,	0,2438,3941,
#Partially deleted in new
chr19	38942681	38975702	chr19:38942681-38975702	0	-	38946532	38950319	789624	6	70,136,134,112,366,117,	0,2287,3790,5885,7289,32904,
#Partially deleted in new
chr19	38944727	38948603	chr19:38944727-38948603	0	-	38944953	38948603	789624	3	377,96,37,	0,1744,3839,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	38944979	38950166	chr19:38944979-38950166	0	-	38947396	38950166	789624	4	391,1667,112,196,	0,772,3587,4991,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	38990713	39026960	chr19:38990713-39026960	0	-	38990713	39026960	789624	3	48,161,91,	0,23673,36156,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	39024024	39032525	chr19:39024024-39032525	1	-	39025410	39032227	789624	7	218,1155,136,96,112,390,23,	0,375,2845,7004,7184,7839,8478,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	39024052	39032596	chr19:39024052-39032596	3	-	39025410	39032227	789624	6	1502,136,96,112,390,94,	0,2817,6976,7156,7811,8450,
#Partially deleted in new
chr19	39024828	39032785	chr19:39024828-39032785	1	-	39025410	39032227	789624	6	726,136,96,109,390,100,	0,2041,6200,6380,7035,7857,
#Partially deleted in new
chr19	39025411	39032063	chr19:39025411-39032063	0	-	39025411	39025411	8553170	4	143,136,292,200,	0,1458,5617,6452,
#Partially deleted in new
chr19	39025518	39031402	chr19:39025518-39031402	0	-	39025518	39025518	8553170	4	36,136,96,194,	0,1351,5510,5690,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	39030435	39031323	chr19:39030435-39031323	3	+	39030435	39030435	8553170	2	112,685,	0,203,
#Partially deleted in new
chr19	39031284	39032767	chr19:39031284-39032767	0	-	39031284	39032227	789624	3	36,390,82,	0,579,1401,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	39083912	39111493	chr19:39083912-39111493	0	+	39085269	39106965	789624	11	45,299,201,183,274,108,58,68,72,138,1441,	0,1179,14545,15047,16667,17036,17237,17375,17553,23034,26140,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	39084304	39111493	chr19:39084304-39111493	3	+	39085269	39110118	789624	13	96,299,201,183,124,63,115,108,58,68,72,138,1441,	0,787,14153,14655,15922,16275,16434,16644,16845,16983,17161,22642,25748,
#Partially deleted in new
chr19	39085235	39110178	chr19:39085235-39110178	1	+	39085269	39110068	789624	10	155,201,183,63,115,108,58,68,72,126,	0,13222,13724,15344,15503,15713,15914,16052,16230,24817,
#Partially deleted in new
chr19	39099062	39110172	chr19:39099062-39110172	0	+	39099062	39110118	789624	8	80,124,63,115,108,58,68,120,	0,1164,1517,1676,1886,2087,2225,10990,
#Partially deleted in new
chr19	39125769	39173803	chr19:39125769-39173803	0	+	39125787	39173803	789624	3	110,226,228,	0,43762,47806,
#Partially deleted in new
chr19	39125781	39178817	chr19:39125781-39178817	1	+	39169553	39178579	0	8	138,226,435,134,127,126,135,394,	0,43750,47794,49149,49530,50808,51893,52642,
#Partially deleted in new
chr19	39125797	39179401	chr19:39125797-39179401	1	+	39169553	39178579	0	10	122,83,226,189,435,134,127,126,135,978,	0,42432,43734,47120,47778,49133,49514,50792,51877,52626,
#Partially deleted in new
chr19	39125798	39173107	chr19:39125798-39173107	0	+	39169553	39173107	789624	5	121,94,83,226,190,	0,42193,42431,43733,47119,
#Partially deleted in new
chr19	39125801	39179402	chr19:39125801-39179402	3	+	39169553	39178579	0	9	118,226,459,435,134,127,126,135,979,	0,43730,47116,47774,49129,49510,50788,51873,52622,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	39125812	39152392	chr19:39125812-39152392	0	+	39125812	39125812	8553170	2	107,273,	0,26307,
#Partially deleted in new
chr19	39125813	39179401	chr19:39125813-39179401	1	+	39169553	39178579	0	11	106,83,216,226,459,435,134,127,126,135,978,	0,42416,42811,43718,47104,47762,49117,49498,50776,51861,52610,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	39125833	39182816	chr19:39125833-39182816	1	+	39169553	39178579	0	9	86,73,226,435,134,127,126,135,4393,	0,42396,43698,47742,49097,49478,50756,51841,52590,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	39134881	39136463	chr19:39134881-39136463	3	-	39134881	39134881	8553170	2	323,42,	0,1540,
#Partially deleted in new
chr19	39156701	39173651	chr19:39156701-39173651	0	+	39169553	39173651	789624	4	149,83,226,76,	0,11528,12830,16874,
#Partially deleted in new
chr19	39168610	39179406	chr19:39168610-39179406	1	+	39169553	39178579	0	9	230,226,459,435,134,127,126,135,983,	0,921,4307,4965,6320,6701,7979,9064,9813,
#Partially deleted in new
chr19	39174935	39178764	chr19:39174935-39178764	0	+	39174935	39178579	789624	4	31,126,135,341,	0,1654,2739,3488,
#Partially deleted in new
chr19	39176488	39178610	chr19:39176488-39178610	0	+	39176488	39176488	8553170	3	227,135,187,	0,1186,1935,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	39196960	39201884	chr19:39196960-39201884	3	+	39196982	39200756	789624	6	359,63,52,96,139,1269,	0,1092,1241,2209,3385,3655,
#Deleted in new
chr19	39202830	39204266	chr19:39202830-39204266	3	-	39202986	39204254	789624	2	166,407,	0,1029,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	39236432	39237293	chr19:39236432-39237293	7	-	39236432	39236432	16724991	3	269,154,78,	0,370,783,
#Deleted in new
chr19	39243552	39245129	chr19:39243552-39245129	1	-	39243631	39245077	789624	6	178,84,150,78,182,62,	0,271,455,864,1235,1515,
#Deleted in new
chr19	39243605	39245006	chr19:39243605-39245006	3	-	39243631	39244967	0	5	125,84,150,78,219,	0,218,402,811,1182,
#Partially deleted in new
chr19	39246313	39248856	chr19:39246313-39248856	1	-	39247132	39248579	789624	5	918,75,144,72,428,	0,1075,1394,1610,2115,
#Partially deleted in new
chr19	39246313	39248856	chr19:39246313-39248856	3	-	39246736	39248579	789624	4	433,199,72,428,	0,1154,1610,2115,
#Partially deleted in new
chr19	39246313	39248856	chr19:39246313-39248856	1	-	39247132	39248579	8553170	3	918,75,428,	0,1075,2115,
#Partially deleted in new
chr19	39246313	39248856	chr19:39246313-39248856	1	-	39247132	39248579	8553170	4	918,75,72,428,	0,1075,1610,2115,
#Deleted in new
chr19	39254915	39255269	chr19:39254915-39255269	7	-	39254915	39254915	16724991	1	354,	0,
#Deleted in new
chr19	39264381	39265817	chr19:39264381-39265817	7	+	39264381	39264381	16724991	5	150,72,144,75,99,	0,583,727,1109,1337,
#Deleted in new
chr19	39268513	39270092	chr19:39268513-39270092	3	+	39268568	39270013	789624	6	65,182,78,150,84,178,	0,163,638,974,1224,1401,
#Partially deleted in new
chr19	39296324	39298673	chr19:39296324-39298673	3	+	39296421	39298516	0	5	268,78,144,84,283,	0,480,1639,1888,2066,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	39306567	39315336	chr19:39306567-39315336	3	-	39307632	39315336	789624	2	1975,1406,	0,7363,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	39314650	39320858	chr19:39314650-39320858	3	-	39314650	39314650	8553170	4	723,55,33,66,	0,1431,3675,6142,
#Partially deleted in new
chr19	39328352	39336017	chr19:39328352-39336017	1	-	39328476	39335287	789624	6	196,74,83,50,50,44,	0,647,1191,4724,6908,7621,
#Partially deleted in new
chr19	39328356	39336185	chr19:39328356-39336185	3	-	39328476	39335976	0	7	192,74,83,50,50,97,212,	0,643,1187,4720,6904,7078,7617,
#Partially deleted in new
chr19	39328358	39336005	chr19:39328358-39336005	0	-	39329593	39335976	789624	6	190,74,83,50,97,32,	0,641,1185,4718,7076,7615,
#Partially deleted in new
chr19	39328358	39335531	chr19:39328358-39335531	0	-	39329593	39335531	789624	5	190,74,79,50,97,	0,641,1189,4718,7076,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	39328358	39336006	chr19:39328358-39336006	1	-	39328939	39335976	789624	6	715,83,50,50,97,33,	0,1185,4718,6902,7076,7615,
#Partially deleted in new
chr19	39328361	39342372	chr19:39328361-39342372	1	-	39328476	39335435	789624	7	187,74,83,50,50,97,81,	0,638,1182,4715,6899,7073,13930,
#Partially deleted in new
chr19	39328364	39336028	chr19:39328364-39336028	1	-	39328476	39335435	789624	7	184,74,83,50,50,120,55,	0,635,1179,4712,6896,7070,7609,
#Partially deleted in new
chr19	39328364	39336039	chr19:39328364-39336039	1	-	39328476	39335976	789624	4	184,50,97,66,	0,6896,7070,7609,
#Partially deleted in new
chr19	39328364	39336037	chr19:39328364-39336037	0	-	39329593	39335976	789624	4	184,74,83,64,	0,635,1179,7609,
#Partially deleted in new
chr19	39328364	39336005	chr19:39328364-39336005	1	-	39328476	39335976	789624	5	184,74,83,50,32,	0,635,1179,4712,7609,
#Partially deleted in new
chr19	39328383	39336024	chr19:39328383-39336024	1	-	39329033	39335976	789624	6	165,74,50,50,97,51,	0,616,4693,6877,7051,7590,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	39332903	39336083	chr19:39332903-39336083	0	-	39332903	39332903	8553170	3	223,97,110,	0,2531,3070,
#Deleted in new
chr19	39341772	39341945	chr19:39341772-39341945	3	-	39341772	39341772	8553170	1	173,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	39342395	39369683	chr19:39342395-39369683	0	+	39356893	39369683	789624	4	181,61,401,29,	0,11610,14293,27259,
#Partially deleted in new
chr19	39342441	39384188	chr19:39342441-39384188	1	+	39356893	39383730	789624	13	135,401,471,240,110,87,340,86,119,199,124,84,481,	0,14247,27213,33208,33995,34263,35043,36062,37524,38145,38548,40766,41266,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr19	39342467	39384926	chr19:39342467-39384926	3	+	39356893	39383527	789624	16	109,102,558,61,401,471,240,110,87,340,86,119,199,124,84,1428,	0,5820,9349,11538,14221,27187,33182,33969,34237,35017,36036,37498,38119,38522,40740,41031,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	39349799	39352489	chr19:39349799-39352489	0	+	39349799	39349799	8553170	1	2690,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	39354003	39370115	chr19:39354003-39370115	0	+	39356893	39370115	789624	3	63,401,461,	0,2685,15651,
#Partially deleted in new
chr19	39356682	39384895	chr19:39356682-39384895	1	+	39356893	39383527	789624	12	407,471,240,110,87,340,86,119,199,124,84,1397,	0,12972,18967,19754,20022,20802,21821,23283,23904,24307,26525,26816,
#Partially deleted in new
chr19	39356682	39384895	chr19:39356682-39384895	1	+	39356893	39383229	789624	13	407,471,240,110,87,340,86,119,169,28,124,84,1397,	0,12972,18967,19754,20022,20802,21821,23283,23904,24075,24307,26525,26816,
#Partially deleted in new
chr19	39356815	39385710	chr19:39356815-39385710	1	+	39356893	39385590	789624	5	274,471,240,59,132,	0,12839,18834,19621,28763,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	39369152	39369448	chr19:39369152-39369448	3	+	39369152	39369152	8553170	1	296,	0,
#Partially deleted in new
chr19	39369552	39375680	chr19:39369552-39375680	0	+	39369552	39369552	8553170	2	573,31,	0,6097,
#Partially deleted in new
chr19	39370091	39376546	chr19:39370091-39376546	0	+	39370091	39376546	789624	2	34,110,	0,6345,
#Partially deleted in new
chr19	39378504	39381296	chr19:39378504-39381296	0	+	39378504	39378504	8553170	4	85,119,199,307,	0,1461,2082,2485,
#Partially deleted in new
chr19	39380733	39383586	chr19:39380733-39383586	0	+	39380733	39383314	789624	3	52,124,379,	0,256,2474,
#Deleted in new
chr19	39385120	39385698	chr19:39385120-39385698	0	+	39385120	39385120	8553170	1	578,	0,
#Partially deleted in new
chr19	39385851	39391195	chr19:39385851-39391195	3	-	39385990	39390864	0	14	552,91,106,129,117,104,69,106,102,67,122,93,30,378,	0,630,842,2487,2708,2910,3095,3241,3430,3628,3788,4217,4408,4966,
#Partially deleted in new
chr19	39385852	39391154	chr19:39385852-39391154	1	-	39385914	39390864	0	13	367,91,106,129,117,104,69,106,102,67,122,93,337,	0,629,841,2486,2707,2909,3094,3240,3429,3627,3787,4216,4965,
#Deleted in new
chr19	39386364	39386766	chr19:39386364-39386766	0	-	39386364	39386766	789624	2	208,73,	0,329,
#Deleted in new
chr19	39388841	39389198	chr19:39388841-39389198	0	-	39388841	39388841	8553170	2	174,106,	0,251,
#Deleted in new
chr19	39389293	39391082	chr19:39389293-39391082	0	-	39389293	39389293	8553170	5	90,282,93,30,265,	0,186,775,966,1524,
#Deleted in new
chr19	39389885	39391117	chr19:39389885-39391117	0	-	39389885	39389885	8553170	3	276,30,300,	0,374,932,
#Deleted in new
chr19	39390068	39391154	chr19:39390068-39391154	0	-	39390068	39390068	8553170	2	221,337,	0,749,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	39391302	39399976	chr19:39391302-39399976	0	+	39391359	39393564	789624	3	336,85,2520,	0,2250,6154,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	39391310	39400637	chr19:39391310-39400637	3	+	39391359	39397699	789624	4	328,59,85,3181,	0,1153,2242,6146,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	39391322	39400561	chr19:39391322-39400561	1	+	39391359	39397699	789624	4	316,59,85,3105,	0,1141,2230,6134,
#Partially deleted in new
chr19	39391387	39393637	chr19:39391387-39393637	0	+	39391422	39392721	789624	4	251,59,151,85,	0,1076,1264,2165,
#Partially deleted in new
chr19	39391392	39398607	chr19:39391392-39398607	1	+	39391422	39397757	789624	4	246,59,85,1081,	0,1071,2160,6134,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	39391395	39399559	chr19:39391395-39399559	1	+	39391422	39397699	789624	4	243,59,85,2103,	0,1068,2157,6061,
#Partially deleted in new
chr19	39391411	39397698	chr19:39391411-39397698	0	+	39391422	39397698	789624	4	227,59,108,242,	0,1052,2141,6045,
#Deleted in new
chr19	39406812	39409412	chr19:39406812-39409412	3	+	39406886	39408699	789624	2	116,1670,	0,930,
#Deleted in new
chr19	39406856	39408179	chr19:39406856-39408179	1	+	39406886	39407102	789624	2	253,437,	0,886,
#Deleted in new
chr19	39406857	39409368	chr19:39406857-39409368	0	+	39406857	39408699	789624	2	75,1624,	0,887,
#Deleted in new
chr19	39407438	39408143	chr19:39407438-39408143	0	+	39407438	39408143	789624	2	43,401,	0,304,
#Deleted in new
chr19	39409622	39409678	chr19:39409622-39409678	3	-	39409622	39409622	5263520	1	56,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr19	39412584	39428415	chr19:39412584-39428415	3	+	39414086	39425294	789624	19	828,131,269,101,67,47,151,138,201,93,87,34,102,48,39,17,174,922,4683,	0,1480,2407,2754,3763,3966,4265,4970,5320,6149,6332,8041,8166,8364,8490,8698,9530,10147,11148,
#Deleted in new
chr19	39413149	39414232	chr19:39413149-39414232	0	+	39414086	39414232	789624	2	263,168,	0,915,
#Partially deleted in new
chr19	39413308	39425437	chr19:39413308-39425437	1	+	39414086	39425379	789624	20	104,131,92,101,67,47,151,138,201,93,87,34,102,48,39,17,174,922,1150,200,	0,756,1860,2030,3039,3242,3541,4246,4596,5425,5608,7317,7442,7640,7766,7974,8806,9423,10424,11929,
#Deleted in new
chr19	39413527	39415260	chr19:39413527-39415260	0	+	39414086	39415260	789624	3	79,131,272,	0,537,1461,
#Partially deleted in new
chr19	39413664	39425516	chr19:39413664-39425516	1	+	39414086	39425294	789624	18	227,131,269,101,67,47,151,138,201,93,87,34,102,48,39,17,174,279,	0,400,1327,1674,2683,2886,3185,3890,4240,5069,5252,6961,7086,7284,7410,7618,8450,11573,
#Partially deleted in new
chr19	39413811	39416597	chr19:39413811-39416597	0	+	39414086	39416597	789624	5	384,272,101,67,47,	0,1177,1527,2536,2739,
#Partially deleted in new
chr19	39415192	39425739	chr19:39415192-39425739	0	+	39415192	39425294	789624	15	68,101,67,47,151,138,201,93,87,34,102,17,174,922,2007,	0,146,1155,1358,1657,2362,2712,3541,3724,5433,5558,6090,6922,7539,8540,
#Partially deleted in new
chr19	39417844	39421113	chr19:39417844-39421113	0	+	39417844	39417844	8553170	7	261,93,87,34,102,48,39,	0,889,1072,2781,2906,3104,3230,
#Partially deleted in new
chr19	39420800	39425473	chr19:39420800-39425473	0	+	39420800	39425294	789624	5	52,48,17,174,236,	0,148,482,1314,4437,
#Partially deleted in new
chr19	39421034	39422216	chr19:39421034-39422216	0	+	39421034	39421034	8553170	3	79,17,102,	0,248,1080,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	39421665	39422828	chr19:39421665-39422828	0	+	39421665	39421665	8553170	2	623,97,	0,1066,
#Deleted in new
chr19	39423427	39425512	chr19:39423427-39425512	0	+	39423427	39425294	789624	3	226,29,275,	0,305,1810,
#Deleted in new
chr19	39424310	39425514	chr19:39424310-39425514	0	+	39424310	39425379	789624	2	145,277,	0,927,
#Deleted in new
chr19	39424387	39425516	chr19:39424387-39425516	0	+	39424387	39425294	789624	2	68,279,	0,850,
#Deleted in new
chr19	39424562	39425495	chr19:39424562-39425495	0	+	39424562	39425379	789624	2	320,258,	0,675,
#Deleted in new
chr19	39424770	39425665	chr19:39424770-39425665	0	+	39424770	39425379	789624	3	112,180,124,	0,467,771,
#Partially deleted in new
chr19	39433206	39435948	chr19:39433206-39435948	3	-	39433272	39435895	0	5	212,48,97,102,101,	0,315,458,2400,2641,
#Partially deleted in new
chr19	39433206	39435936	chr19:39433206-39435936	1	-	39433349	39435895	789624	4	212,240,102,89,	0,315,2400,2641,
#Partially deleted in new
chr19	39433206	39435915	chr19:39433206-39435915	1	-	39433513	39435895	789624	5	212,76,97,102,68,	0,287,458,2400,2641,
#Partially deleted in new
chr19	39433216	39435941	chr19:39433216-39435941	1	-	39433272	39435895	789624	5	202,48,97,51,94,	0,305,448,2441,2631,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	39433222	39435948	chr19:39433222-39435948	0	-	39433222	39433222	8553170	4	196,48,2044,101,	0,299,442,2625,
#Deleted in new
chr19	39433222	39433761	chr19:39433222-39433761	0	-	39433513	39433761	789624	2	347,97,	0,442,
#Deleted in new
chr19	39433252	39434390	chr19:39433252-39434390	0	-	39433252	39433252	8553170	2	166,869,	0,269,
#Partially deleted in new
chr19	39433259	39435705	chr19:39433259-39435705	0	-	39433408	39435705	789624	4	159,52,97,99,	0,258,405,2347,
#Partially deleted in new
chr19	39436155	39453442	chr19:39436155-39453442	0	+	39445890	39453442	789624	6	22,45,45,197,162,87,	0,3641,3784,9285,9648,17200,
#Partially deleted in new
chr19	39439571	39441441	chr19:39439571-39441441	0	+	39439571	39439571	8553170	3	270,45,152,	0,368,1718,
#Partially deleted in new
chr19	39441642	39476670	chr19:39441642-39476670	3	+	39445890	39476399	0	31	83,197,162,166,66,12,70,69,66,31,69,252,90,71,106,94,137,156,147,147,126,85,120,103,128,106,159,169,204,96,415,	0,3798,4161,11713,16032,16651,17175,17362,17541,17916,18249,23155,24837,25032,27113,27436,27619,28476,28734,29714,29962,30766,31167,31369,31560,31773,32320,32591,32872,34438,34613,
#Partially deleted in new
chr19	39445545	39476666	chr19:39445545-39476666	1	+	39445890	39476399	0	29	92,162,166,66,70,69,66,31,69,252,90,71,106,94,137,156,147,147,126,85,120,103,128,106,159,169,204,96,411,	0,258,7810,12129,13272,13459,13638,14013,14346,19252,20934,21129,23210,23533,23716,24573,24831,25811,26059,26863,27264,27466,27657,27870,28417,28688,28969,30535,30710,
#Partially deleted in new
chr19	39445545	39476666	chr19:39445545-39476666	1	+	39445890	39476399	0	30	92,162,166,66,12,70,69,66,31,69,252,90,71,106,94,137,156,147,147,126,85,120,103,128,106,159,169,204,96,411,	0,258,7810,12129,12748,13272,13459,13638,14013,14346,19252,20934,21129,23210,23533,23716,24573,24831,25811,26059,26863,27264,27466,27657,27870,28417,28688,28969,30535,30710,
#Partially deleted in new
chr19	39445557	39457740	chr19:39445557-39457740	0	+	39445890	39457740	789624	4	80,84,166,66,	0,324,7798,12117,
#Partially deleted in new
chr19	39445581	39457949	chr19:39445581-39457949	0	+	39445581	39445581	8553170	4	56,162,166,275,	0,222,7774,12093,
#Partially deleted in new
chr19	39445592	39457740	chr19:39445592-39457740	0	+	39445890	39457740	789624	4	45,87,166,66,	0,286,7763,12082,
#Partially deleted in new
chr19	39445607	39457932	chr19:39445607-39457932	0	+	39445607	39445607	8553170	4	30,84,166,258,	0,274,7748,12067,
#Partially deleted in new
chr19	39445643	39476670	chr19:39445643-39476670	1	+	39445890	39476399	0	28	322,166,66,70,69,66,31,69,252,90,71,106,94,137,156,147,147,126,85,120,103,128,106,159,169,204,96,415,	0,7712,12031,13174,13361,13540,13915,14248,19154,20836,21031,23112,23435,23618,24475,24733,25713,25961,26765,27166,27368,27559,27772,28319,28590,28871,30437,30612,
#Partially deleted in new
chr19	39445683	39476670	chr19:39445683-39476670	1	+	39445890	39476399	0	29	282,166,66,12,70,69,66,31,69,252,90,71,106,94,137,156,147,147,126,85,120,103,128,106,159,169,204,96,415,	0,7672,11991,12610,13134,13321,13500,13875,14208,19114,20796,20991,23072,23395,23578,24435,24693,25673,25921,26725,27126,27328,27519,27732,28279,28550,28831,30397,30572,
#Deleted in new
chr19	39457674	39460125	chr19:39457674-39460125	0	+	39457674	39457674	8553170	7	66,12,70,69,66,31,234,	0,619,1143,1330,1509,1884,2217,
#Partially deleted in new
chr19	39457700	39466720	chr19:39457700-39466720	0	+	39457700	39466720	789624	9	40,12,70,69,66,31,69,90,46,	0,593,1117,1304,1483,1858,2191,8779,8974,
#Deleted in new
chr19	39458175	39459042	chr19:39458175-39459042	0	+	39458175	39458175	8553170	3	130,70,38,	0,642,829,
#Partially deleted in new
chr19	39458351	39464885	chr19:39458351-39464885	0	+	39458351	39458351	8553170	6	536,69,66,31,69,88,	0,653,832,1207,1540,6446,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	39466472	39467091	chr19:39466472-39467091	0	+	39466472	39466472	8553170	2	97,417,	0,202,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	39467453	39475225	chr19:39467453-39475225	0	+	39467453	39467453	8553170	15	1408,94,137,156,147,147,126,85,120,103,128,106,159,169,711,	0,1625,1808,2665,2923,3903,4151,4955,5356,5558,5749,5962,6509,6780,7061,
#Deleted in new
chr19	39469562	39470523	chr19:39469562-39470523	0	+	39469562	39469562	8553170	2	712,147,	0,814,
#Deleted in new
chr19	39471440	39471864	chr19:39471440-39471864	0	+	39471440	39471440	8553170	2	63,260,	0,164,
#Deleted in new
chr19	39475873	39476670	chr19:39475873-39476670	0	+	39475873	39475873	8553170	2	303,415,	0,382,
#Duplicated in new
chr19	39480411	39489928	chr19:39480411-39489928	1	+	39480544	39489820	789624	11	550,151,32,22,59,120,105,99,157,107,210,	0,1471,2473,2723,5132,5276,5775,5985,7649,8127,9307,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	39480411	39490888	chr19:39480411-39490888	3	+	39480544	39489820	789624	11	550,151,32,22,59,120,105,99,157,107,1170,	0,1471,2473,2723,5132,5276,5775,5985,7649,8127,9307,
#Partially deleted in new
chr19	39480483	39489928	chr19:39480483-39489928	0	+	39480853	39485800	789624	10	478,151,32,22,120,105,99,157,107,210,	0,1399,2401,2651,5204,5703,5913,7577,8055,9235,
#Partially deleted in new
chr19	39480831	39490074	chr19:39480831-39490074	1	+	39480853	39489820	789624	11	130,151,32,22,59,120,105,99,157,107,356,	0,1051,2053,2303,4712,4856,5355,5565,7229,7707,8887,
#Partially deleted in new
chr19	39480840	39490119	chr19:39480840-39490119	1	+	39480853	39489820	789624	4	121,157,107,401,	0,7220,7698,8878,
#Partially deleted in new
chr19	39480845	39483194	chr19:39480845-39483194	0	+	39480845	39480845	8553170	3	116,151,310,	0,1037,2039,
#Partially deleted in new
chr19	39480849	39488174	chr19:39480849-39488174	0	+	39480853	39488174	789624	7	112,32,22,120,105,99,114,	0,2035,2285,4838,5337,5547,7211,
#Partially deleted in new
chr19	39480852	39488186	chr19:39480852-39488186	0	+	39480853	39488186	789624	7	109,151,59,120,105,99,126,	0,1030,4691,4835,5334,5544,7208,
#Partially deleted in new
chr19	39480855	39488217	chr19:39480855-39488217	0	+	39480855	39488217	789624	7	106,151,32,120,105,99,157,	0,1027,2029,4832,5331,5541,7205,
#Partially deleted in new
chr19	39480857	39483545	chr19:39480857-39483545	0	+	39480857	39480857	8553170	4	104,151,32,411,	0,1025,2027,2277,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	39480881	39485602	chr19:39480881-39485602	0	+	39480881	39485201	789624	6	80,151,32,22,112,59,	0,1001,2003,2253,4270,4662,
#Partially deleted in new
chr19	39480927	39486495	chr19:39480927-39486495	0	+	39480927	39485691	789624	8	34,151,79,22,59,120,105,99,	0,955,1957,2207,4616,4760,5259,5469,
#Partially deleted in new
chr19	39480927	39488604	chr19:39480927-39488604	0	+	39480927	39485800	789624	9	34,151,32,22,120,105,99,157,66,	0,955,1957,2207,4760,5259,5469,7133,7611,
#Partially deleted in new
chr19	39481224	39486495	chr19:39481224-39486495	0	+	39481224	39486495	789624	8	92,151,32,22,59,120,105,99,	0,658,1660,1910,4319,4463,4962,5172,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	39485038	39485806	chr19:39485038-39485806	0	+	39485038	39485038	8553170	2	564,119,	0,649,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	39485590	39491230	chr19:39485590-39491230	0	+	39485590	39485590	8553170	5	701,99,157,107,1512,	0,806,2470,2948,4128,
#Partially deleted in new
chr19	39488005	39489768	chr19:39488005-39489768	0	+	39488005	39488005	8553170	3	212,107,50,	0,533,1713,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	39488113	39492722	chr19:39488113-39492722	0	+	39488113	39489820	789624	4	104,107,700,826,	0,425,1605,3783,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	39491511	39493785	chr19:39491511-39493785	0	+	39491511	39491511	8553170	1	2274,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	39492416	39493715	chr19:39492416-39493715	0	+	39492416	39492416	8553170	2	352,421,	0,878,
#Partially deleted in new
chr19	39498894	39508468	chr19:39498894-39508468	3	+	39498974	39508257	789624	9	149,282,58,243,218,223,580,85,217,	0,297,1720,3920,5176,6334,8144,8935,9357,
#Partially deleted in new
chr19	39498894	39505653	chr19:39498894-39505653	0	+	39498894	39498894	8553170	6	149,282,58,243,218,425,	0,297,1720,3920,5176,6334,
#Partially deleted in new
chr19	39498966	39507289	chr19:39498966-39507289	0	+	39498974	39507289	789624	4	77,282,58,251,	0,225,1648,8072,
#Partially deleted in new
chr19	39498967	39508481	chr19:39498967-39508481	1	+	39498974	39508013	789624	8	76,282,58,243,218,223,580,652,	0,224,1647,3847,5103,6261,8071,8862,
#Partially deleted in new
chr19	39498967	39499472	chr19:39498967-39499472	0	+	39498967	39498967	8553170	2	87,281,	0,224,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	39515112	39520686	chr19:39515112-39520686	3	+	39515212	39519148	789624	6	909,25,54,75,100,541,	0,3495,3627,3790,3958,5033,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	39515112	39520686	chr19:39515112-39520686	1	+	39515212	39519148	789624	7	909,7,15,54,75,100,541,	0,3495,3505,3627,3790,3958,5033,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	39515112	39520686	chr19:39515112-39520686	1	+	39515212	39519148	789624	7	909,12,13,54,75,100,541,	0,3367,3507,3627,3790,3958,5033,
#Partially deleted in new
chr19	39515445	39518808	chr19:39515445-39518808	0	+	39515445	39515445	8553170	2	576,69,	0,3294,
#Partially deleted in new
chr19	39515813	39520264	chr19:39515813-39520264	0	+	39515813	39518752	789624	4	208,54,100,119,	0,2926,3257,4332,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	39530989	39532854	chr19:39530989-39532854	3	-	39532316	39532802	789624	1	1865,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	39531336	39532843	chr19:39531336-39532843	0	-	39531336	39531336	8553170	2	177,104,	0,1403,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	39532411	39534422	chr19:39532411-39534422	3	+	39532411	39532411	8553170	3	437,121,89,	0,704,1922,
#Partially deleted in new
chr19	39534462	39535021	chr19:39534462-39535021	7	+	39534462	39534462	16724991	1	559,	0,
#Partially deleted in new
chr19	39538704	39540333	chr19:39538704-39540333	3	-	39539368	39540079	789624	1	1629,	0,
#Partially deleted in new
chr19	39553033	39555356	chr19:39553033-39555356	7	+	39553033	39553033	16724991	2	323,117,	0,2206,
#Deleted in new
chr19	39584041	39586489	chr19:39584041-39586489	7	+	39584041	39584041	16724991	3	147,196,126,	0,657,2322,
#Deleted in new
chr19	39588954	39589125	chr19:39588954-39589125	7	+	39588954	39588954	16724991	1	171,	0,
#Deleted in new
chr19	39590980	39591151	chr19:39590980-39591151	7	+	39590980	39590980	16724991	1	171,	0,
#Deleted in new
chr19	39597831	39598002	chr19:39597831-39598002	7	+	39597831	39597831	16724991	1	171,	0,
#Partially deleted in new
chr19	39602500	39607348	chr19:39602500-39607348	1	+	39602568	39607348	789624	5	83,77,211,114,9,	0,2101,2677,4722,4839,
#Partially deleted in new
chr19	39602523	39607476	chr19:39602523-39607476	3	+	39602568	39607339	0	4	60,77,211,254,	0,2078,2654,4699,
#Partially deleted in new
chr19	39602536	39607259	chr19:39602536-39607259	0	+	39602568	39607259	789624	3	47,198,37,	0,2654,4686,
#Partially deleted in new
chr19	39605091	39607473	chr19:39605091-39607473	0	+	39605091	39605091	8553170	2	297,251,	0,2131,
#Deleted in new
chr19	39631299	39631446	chr19:39631299-39631446	7	-	39631299	39631299	16724991	1	147,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	39638684	39642401	chr19:39638684-39642401	7	+	39638684	39638684	16724991	4	1284,211,86,250,	0,1789,2136,3467,
#Deleted in new
chr19	39639888	39642240	chr19:39639888-39642240	5	+	39639888	39639888	16724991	3	80,215,89,	0,585,2263,
#Deleted in new
chr19	39639897	39642401	chr19:39639897-39642401	5	+	39639897	39639897	16724991	3	71,211,250,	0,576,2254,
#Deleted in new
chr19	39644501	39644612	chr19:39644501-39644612	7	+	39644501	39644501	16724991	1	111,	0,
#Partially deleted in new
chr19	39655893	39660647	chr19:39655893-39660647	3	+	39655961	39660520	789624	4	83,77,211,253,	0,1989,2566,4501,
#Partially deleted in new
chr19	39655918	39660647	chr19:39655918-39660647	0	+	39655961	39658495	789624	4	58,132,211,253,	0,1909,2541,4476,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	39679373	39686368	chr19:39679373-39686368	7	+	39679373	39679373	16724991	6	61,77,211,1932,97,184,	0,2059,2624,4113,6182,6811,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	39679392	39685251	chr19:39679392-39685251	4	+	39679392	39679392	16724991	2	42,1765,	0,4094,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	39679392	39685251	chr19:39679392-39685251	4	+	39679392	39679392	16724991	3	42,211,1765,	0,2605,4094,
#Partially deleted in new
chr19	39681432	39684148	chr19:39681432-39684148	5	+	39681432	39681432	16724991	3	77,211,118,	0,565,2598,
#Partially deleted in new
chr19	39685243	39694577	chr19:39685243-39694577	3	+	39685243	39685243	8553170	2	175,114,	0,9220,
#Deleted in new
chr19	39693924	39696258	chr19:39693924-39696258	7	+	39693924	39693924	16724991	3	36,211,116,	0,539,2218,
#Deleted in new
chr19	39697903	39698073	chr19:39697903-39698073	7	+	39697903	39697903	16724991	1	170,	0,
#Partially deleted in new
chr19	39704305	39709444	chr19:39704305-39709444	1	+	39704528	39709313	789624	4	238,77,211,248,	0,2291,2872,4891,
#Partially deleted in new
chr19	39704480	39709313	chr19:39704480-39709313	3	+	39705907	39709313	789624	5	63,305,77,211,117,	0,1224,2116,2697,4716,
#Partially deleted in new
chr19	39704501	39709412	chr19:39704501-39709412	0	+	39704501	39709313	789624	3	42,211,216,	0,2676,4695,
#Deleted in new
chr19	39726029	39726775	chr19:39726029-39726775	7	-	39726029	39726029	16724991	2	191,73,	0,673,
#Partially deleted in new
chr19	39731249	39738028	chr19:39731249-39738028	3	-	39731379	39737952	0	4	256,211,77,91,	0,3033,3747,6688,
#Partially deleted in new
chr19	39776594	39786135	chr19:39776594-39786135	1	+	39784609	39786135	789624	3	81,152,438,	0,7932,9103,
#Partially deleted in new
chr19	39778882	39786167	chr19:39778882-39786167	3	+	39778920	39786135	789624	3	45,152,470,	0,5644,6815,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	39812971	39813555	chr19:39812971-39813555	3	-	39812971	39812971	8553170	1	584,	0,
#Partially deleted in new
chr19	39825349	39834201	chr19:39825349-39834201	3	-	39825714	39831867	789624	11	737,107,316,141,147,287,148,189,120,164,179,	0,830,1322,1935,2160,2947,4530,5025,5314,6455,8673,
#Partially deleted in new
chr19	39825349	39833634	chr19:39825349-39833634	1	-	39825714	39831867	789624	11	737,107,316,141,147,287,148,189,120,164,368,	0,830,1322,1935,2160,2947,4530,5025,5314,6455,7917,
#Partially deleted in new
chr19	39825352	39834201	chr19:39825352-39834201	1	-	39825714	39831867	789624	12	734,107,196,36,141,147,287,148,189,120,164,179,	0,827,1319,1599,1932,2157,2944,4527,5022,5311,6452,8670,
#Partially deleted in new
chr19	39825714	39834158	chr19:39825714-39834158	1	-	39825714	39831867	789624	11	372,107,196,141,147,287,148,189,120,164,136,	0,465,957,1570,1795,2582,4165,4660,4949,6090,8308,
#Partially deleted in new
chr19	39825714	39831867	chr19:39825714-39831867	1	-	39825714	39831867	789624	11	372,107,196,36,141,147,287,148,189,120,63,	0,465,957,1237,1570,1795,2582,4165,4660,4949,6090,
#Partially deleted in new
chr19	39828401	39830143	chr19:39828401-39830143	0	-	39828401	39828401	8553170	2	182,264,	0,1478,
#Deleted in new
chr19	39829715	39829802	chr19:39829715-39829802	3	-	39829715	39829715	5263520	1	87,	0,
#Partially deleted in new
chr19	39829881	39833638	chr19:39829881-39833638	0	-	39829881	39831867	789624	5	146,189,120,164,38,	0,493,782,1923,3719,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	39830205	39834152	chr19:39830205-39834152	1	-	39830332	39831867	789624	4	358,120,164,130,	0,458,1599,3817,
#Partially deleted in new
chr19	39834457	39846414	chr19:39834457-39846414	3	-	39834537	39846300	0	9	105,146,113,133,171,95,102,171,124,	0,210,2098,3253,4577,5775,5956,6159,11833,
#Partially deleted in new
chr19	39834457	39840441	chr19:39834457-39840441	0	-	39834663	39840441	789624	6	356,113,133,171,95,28,	0,2098,3253,4577,5775,5956,
#Partially deleted in new
chr19	39834459	39838091	chr19:39834459-39838091	0	-	39834459	39834459	8553170	5	103,146,113,133,133,	0,208,2096,3251,3499,
#Partially deleted in new
chr19	39834502	39846370	chr19:39834502-39846370	0	-	39839194	39846300	789624	7	60,146,113,133,171,102,80,	0,165,2053,3208,4532,5911,11788,
#Partially deleted in new
chr19	39834690	39840722	chr19:39834690-39840722	0	-	39834690	39840722	789624	7	123,113,133,171,95,48,49,	0,1865,3020,4344,5542,5723,5983,
#Partially deleted in new
chr19	39834716	39846357	chr19:39834716-39846357	0	-	39834716	39846300	789624	8	97,113,133,171,95,96,105,67,	0,1839,2994,4318,5516,5697,5966,11574,
#Partially deleted in new
chr19	39836555	39846342	chr19:39836555-39846342	0	-	39836555	39846300	789624	7	113,133,171,95,96,66,52,	0,1155,2479,3677,3858,4166,9735,
#Partially deleted in new
chr19	39837819	39846347	chr19:39837819-39846347	0	-	39837819	39846300	789624	7	24,171,95,102,66,66,57,	0,1215,2413,2594,2797,2902,8471,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	39838259	39846376	chr19:39838259-39846376	0	-	39838259	39838259	8553170	5	946,95,102,171,86,	0,1973,2154,2357,8031,
#Partially deleted in new
chr19	39839034	39846357	chr19:39839034-39846357	0	-	39839034	39846300	789624	5	171,95,102,168,67,	0,1198,1379,1585,7256,
#Partially deleted in new
chr19	39839073	39846329	chr19:39839073-39846329	0	-	39839073	39846300	789624	5	132,95,102,132,39,	0,1159,1340,1582,7217,
#Partially deleted in new
chr19	39863322	39906323	chr19:39863322-39906323	0	-	39863486	39906323	789624	22	174,272,384,200,574,572,544,617,574,338,142,200,595,593,544,617,574,338,142,200,595,593,	0,298,3414,6893,8755,9901,12065,13335,14340,16232,19982,22350,22668,26156,28320,29588,30599,32483,36233,38602,38920,42408,
#Partially deleted in new
chr19	39885729	39906315	chr19:39885729-39906315	3	-	39885729	39906315	789624	11	143,595,593,544,617,574,338,142,200,595,585,	0,261,3749,5913,7181,8192,10076,13826,16195,16513,20001,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	39886265	39887292	chr19:39886265-39887292	0	-	39886265	39886265	8553170	2	320,174,	0,853,
#Partially deleted in new
chr19	39913689	39934626	chr19:39913689-39934626	0	-	39913689	39934618	789624	6	568,605,571,350,1248,63,	0,1495,4382,10693,13369,20874,
#Deleted in new
chr19	39943238	39943680	chr19:39943238-39943680	7	-	39943238	39943238	16724991	1	442,	0,
#Partially deleted in new
chr19	39971004	39981441	chr19:39971004-39981441	3	+	39971202	39981305	0	11	234,99,187,147,110,94,168,77,169,56,250,	0,1141,1364,3289,3519,3730,8812,9065,9281,9657,10187,
#Partially deleted in new
chr19	39971169	39981441	chr19:39971169-39981441	1	+	39971202	39981305	0	11	69,99,94,147,110,94,168,77,169,56,250,	0,976,1292,3124,3354,3565,8647,8900,9116,9492,10022,
#Partially deleted in new
chr19	39971169	39981408	chr19:39971169-39981408	0	+	39971169	39971169	8553170	10	69,99,187,147,110,94,168,385,56,217,	0,976,1199,3124,3354,3565,8647,8900,9492,10022,
#Partially deleted in new
chr19	39971179	39981441	chr19:39971179-39981441	0	+	39971179	39971179	8553170	10	59,99,187,147,110,94,168,77,432,250,	0,966,1189,3114,3344,3555,8637,8890,9106,10012,
#Partially deleted in new
chr19	39971191	39980061	chr19:39971191-39980061	0	+	39971191	39971191	8553170	7	47,99,187,147,110,94,245,	0,954,1177,3102,3332,3543,8625,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	39979443	39980178	chr19:39979443-39980178	0	+	39979443	39979443	8553170	2	541,109,	0,626,
#Partially deleted in new
chr19	39997035	40013803	chr19:39997035-40013803	0	+	40006125	40013803	789624	6	122,55,87,127,96,139,	0,825,9060,10238,11434,16629,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	39997062	40016545	chr19:39997062-40016545	1	+	39998326	40015781	789624	7	95,55,85,87,127,96,2881,	0,798,1185,9033,10211,11407,16602,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	39997075	40021041	chr19:39997075-40021041	3	+	39998326	40015781	789624	7	82,55,163,87,127,96,7377,	0,785,1172,9020,10198,11394,16589,
#Deleted in new
chr19	39997119	39998550	chr19:39997119-39998550	0	+	39997119	39997119	8553170	3	38,55,303,	0,741,1128,
#Partially deleted in new
chr19	39997235	40008545	chr19:39997235-40008545	0	+	39998326	40008545	789624	6	34,55,163,87,127,76,	0,625,1012,8860,10038,11234,
#Deleted in new
chr19	40023383	40025502	chr19:40023383-40025502	7	-	40023383	40023383	16724991	2	1411,628,	0,1491,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	40028259	40056209	chr19:40028259-40056209	3	-	40034356	40050332	789624	5	8367,96,127,54,21,	0,19115,20410,22064,27929,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	40028259	40056208	chr19:40028259-40056208	1	-	40034356	40050332	789624	5	8367,96,127,54,20,	0,19115,20410,22064,27929,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	40033578	40056205	chr19:40033578-40056205	1	-	40034356	40036414	789624	6	3048,65,127,139,54,105,	0,13827,15091,15339,16745,22522,
#Partially deleted in new
chr19	40036530	40056208	chr19:40036530-40056208	0	-	40036530	40050332	789624	5	96,96,127,54,20,	0,10844,12139,13793,19658,
#Partially deleted in new
chr19	40036530	40056156	chr19:40036530-40056156	1	-	40036566	40050332	789624	5	96,68,127,54,56,	0,10875,12139,13793,19570,
#Partially deleted in new
chr19	40047280	40056106	chr19:40047280-40056106	0	-	40047280	40047280	8553170	4	190,127,54,73,	0,1389,3043,8753,
#Partially deleted in new
chr19	40047378	40056175	chr19:40047378-40056175	0	-	40047378	40050332	789624	5	92,127,54,161,75,	0,1291,2945,8037,8722,
#Partially deleted in new
chr19	40048756	40090925	chr19:40048756-40090925	3	-	40048756	40048756	8553170	7	40,54,96,127,54,70,20,	0,1567,33062,34354,35988,41409,42149,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	40069151	40090888	chr19:40069151-40090888	1	-	40074515	40083144	789624	6	7058,96,127,54,70,95,	0,12667,13959,15593,21014,21642,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	40071005	40090938	chr19:40071005-40090938	1	-	40072856	40089262	789624	9	1644,143,74,96,127,54,155,70,33,	0,1831,5130,10813,12105,13739,18254,19160,19900,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	40072992	40090903	chr19:40072992-40090903	3	-	40074515	40084753	789624	6	3217,96,127,54,70,110,	0,8826,10118,11752,17173,17801,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	40072992	40090938	chr19:40072992-40090938	1	-	40074515	40084753	789624	6	3217,99,127,54,70,33,	0,8826,10118,11752,17173,17913,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	40073179	40090888	chr19:40073179-40090888	1	-	40074515	40084753	789624	6	3030,96,127,54,70,95,	0,8639,9931,11565,16986,17614,
#Partially deleted in new
chr19	40074515	40090235	chr19:40074515-40090235	1	-	40074515	40084753	789624	5	1694,99,127,54,70,	0,7303,8595,10229,15650,
#Partially deleted in new
chr19	40075973	40090938	chr19:40075973-40090938	0	-	40075973	40084753	789624	5	236,96,127,54,33,	0,5845,7137,8771,14932,
#Partially deleted in new
chr19	40076113	40090457	chr19:40076113-40090457	0	-	40076113	40084753	789624	5	96,96,127,54,292,	0,5705,6997,8631,14052,
#Partially deleted in new
chr19	40076113	40090235	chr19:40076113-40090235	0	-	40076113	40084753	789624	5	96,99,127,54,70,	0,5705,6997,8631,14052,
#Partially deleted in new
chr19	40076122	40090938	chr19:40076122-40090938	0	-	40076122	40084753	789624	6	87,96,127,54,70,33,	0,5696,6988,8622,14043,14783,
#Partially deleted in new
chr19	40076169	40090860	chr19:40076169-40090860	0	-	40076169	40084753	789624	6	40,96,127,54,70,111,	0,5649,6941,8575,13996,14580,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	40090753	40094406	chr19:40090753-40094406	3	+	40090753	40090753	8553170	1	3653,	0,
#Deleted in new
chr19	40121310	40122168	chr19:40121310-40122168	7	-	40121310	40121310	16724991	1	858,	0,
#Partially deleted in new
chr19	40191743	40215575	chr19:40191743-40215575	3	+	40192031	40215292	0	10	970,181,149,176,247,117,172,113,705,606,	0,6631,12741,13377,14167,17359,21061,21332,21773,23226,
#Partially deleted in new
chr19	40192244	40204616	chr19:40192244-40204616	0	+	40192244	40192244	8553170	4	210,76,137,132,	0,393,6130,12240,
#Partially deleted in new
chr19	40198396	40209202	chr19:40198396-40209202	0	+	40198396	40205163	789624	4	159,176,247,100,	0,6724,7514,10706,
#Partially deleted in new
chr19	40198423	40213261	chr19:40198423-40213261	0	+	40198423	40209207	789624	5	88,176,117,172,186,	0,6697,10679,14381,14652,
#Partially deleted in new
chr19	40198442	40215528	chr19:40198442-40215528	0	+	40198442	40209207	789624	8	113,149,176,117,172,113,705,559,	0,6042,6678,10660,14362,14633,15074,16527,
#Partially deleted in new
chr19	40204600	40206001	chr19:40204600-40206001	0	+	40204600	40204600	8553170	2	696,91,	0,1310,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	40205529	40206402	chr19:40205529-40206402	0	+	40205529	40205529	8553170	2	70,492,	0,381,
#Partially deleted in new
chr19	40209151	40213734	chr19:40209151-40213734	0	+	40209151	40209151	8553170	3	68,172,659,	0,3653,3924,
#Deleted in new
chr19	40216057	40218399	chr19:40216057-40218399	3	-	40216162	40218381	789624	3	215,183,445,	0,1129,1897,
#Deleted in new
chr19	40216059	40218382	chr19:40216059-40218382	0	-	40216059	40216059	8553170	1	2323,	0,
#Partially deleted in new
chr19	40222207	40226690	chr19:40222207-40226690	1	-	40223051	40226641	789624	5	1096,159,156,90,316,	0,1180,2280,2514,4167,
#Partially deleted in new
chr19	40222207	40226697	chr19:40222207-40226697	3	-	40222306	40226641	789624	6	265,152,159,156,90,323,	0,944,1180,2280,2514,4167,
#Deleted in new
chr19	40222213	40223564	chr19:40222213-40223564	0	-	40222213	40222213	8553170	3	259,152,177,	0,938,1174,
#Partially deleted in new
chr19	40222214	40226657	chr19:40222214-40226657	0	-	40223597	40226641	789624	4	1089,255,156,283,	0,1173,2273,4160,
#Partially deleted in new
chr19	40223047	40224937	chr19:40223047-40224937	1	-	40223051	40224760	789624	4	256,159,156,216,	0,340,1440,1674,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	40230316	40285395	chr19:40230316-40285395	3	-	40233871	40265267	0	14	3635,103,88,215,129,123,69,66,132,154,112,129,130,215,	0,4728,4946,5573,5940,7652,8588,9728,11621,12217,24841,26609,34905,54864,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	40230317	40285395	chr19:40230317-40285395	1	-	40233871	40265267	0	13	3634,103,88,215,123,69,66,132,154,112,129,130,215,	0,4727,4945,5572,7651,8587,9727,11620,12216,24840,26608,34904,54863,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	40232334	40239500	chr19:40232334-40239500	0	-	40232334	40232334	8553170	6	1617,103,88,215,1835,596,	0,2710,2928,3555,3922,6570,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	40232336	40243302	chr19:40232336-40243302	0	-	40232336	40232336	8553170	10	1615,103,88,215,129,123,69,66,132,769,	0,2708,2926,3553,3920,5632,6568,7708,9601,10197,
#Deleted in new
chr19	40233667	40236031	chr19:40233667-40236031	0	-	40235439	40236031	789624	4	284,103,205,142,	0,1377,1595,2222,
#Partially deleted in new
chr19	40233669	40285373	chr19:40233669-40285373	0	-	40242588	40255268	789624	13	282,103,88,215,129,123,69,66,132,154,112,129,193,	0,1375,1593,2220,2587,4299,5235,6375,8268,8864,21488,23256,51511,
#Partially deleted in new
chr19	40233754	40238066	chr19:40233754-40238066	0	-	40233754	40233754	8553170	5	197,103,88,496,98,	0,1290,1508,2135,4214,
#Deleted in new
chr19	40233780	40236071	chr19:40233780-40236071	0	-	40233947	40236071	789624	4	171,47,88,182,	0,1320,1482,2109,
#Partially deleted in new
chr19	40233820	40285342	chr19:40233820-40285342	0	-	40242588	40255268	789624	14	131,103,88,215,129,123,69,66,132,154,112,129,93,162,	0,1224,1442,2069,2436,4148,5084,6224,8117,8713,21337,23105,31438,51360,
#Partially deleted in new
chr19	40233840	40265312	chr19:40233840-40265312	1	-	40233871	40265267	0	12	111,103,88,215,123,69,66,132,154,112,129,91,	0,1204,1422,2049,4128,5064,6204,8097,8693,21317,23085,31381,
#Deleted in new
chr19	40233878	40235958	chr19:40233878-40235958	0	-	40234479	40235958	789624	5	73,123,103,88,69,	0,570,1166,1384,2011,
#Partially deleted in new
chr19	40234497	40285342	chr19:40234497-40285342	1	-	40234871	40255258	789624	12	650,88,215,129,123,69,66,132,154,112,129,162,	0,765,1392,1759,3471,4407,5547,7440,8036,20660,22428,50683,
#Partially deleted in new
chr19	40235101	40242608	chr19:40235101-40242608	0	-	40235101	40242608	789624	8	46,88,215,129,123,69,132,75,	0,161,788,1155,2867,3803,6836,7432,
#Partially deleted in new
chr19	40235893	40240299	chr19:40235893-40240299	0	-	40235893	40235893	8553170	6	211,129,123,69,66,38,	0,363,2075,3011,4151,4368,
#Partially deleted in new
chr19	40236023	40240110	chr19:40236023-40240110	0	-	40236023	40236023	8553170	5	119,129,123,69,66,	0,233,1945,2881,4021,
#Partially deleted in new
chr19	40236023	40237307	chr19:40236023-40237307	0	-	40236023	40236023	8553170	3	81,129,247,	0,233,1037,
#Partially deleted in new
chr19	40236023	40239005	chr19:40236023-40239005	0	-	40236023	40236023	8553170	3	81,123,101,	0,1945,2881,
#Partially deleted in new
chr19	40236023	40239132	chr19:40236023-40239132	0	-	40236023	40236023	8553170	4	81,129,123,228,	0,233,1945,2881,
#Partially deleted in new
chr19	40236031	40239269	chr19:40236031-40239269	0	-	40236031	40236031	8553170	4	73,148,123,365,	0,206,1937,2873,
#Partially deleted in new
chr19	40236301	40242011	chr19:40236301-40242011	0	-	40236301	40242011	789624	2	84,74,	0,5636,
#Partially deleted in new
chr19	40237989	40255177	chr19:40237989-40255177	0	-	40238966	40255177	789624	6	102,69,77,132,154,20,	0,915,2055,3948,4544,17168,
#Partially deleted in new
chr19	40238941	40266317	chr19:40238941-40266317	0	-	40242588	40255268	789624	7	32,66,132,154,112,129,112,	0,1103,2996,3592,16216,17984,27264,
#Partially deleted in new
chr19	40239589	40279330	chr19:40239589-40279330	0	-	40239589	40239589	8553170	7	521,132,154,112,129,130,224,	0,2348,2944,15568,17336,25632,39517,
#Partially deleted in new
chr19	40240069	40256963	chr19:40240069-40256963	0	-	40244410	40256963	789624	6	41,132,154,96,112,38,	0,1868,2464,4249,15088,16856,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	40240790	40244127	chr19:40240790-40244127	0	-	40240790	40240790	8553170	1	3337,	0,
#Partially deleted in new
chr19	40241381	40255269	chr19:40241381-40255269	0	-	40241381	40241381	8553170	3	688,154,112,	0,1152,13776,
#Partially deleted in new
chr19	40241958	40266348	chr19:40241958-40266348	0	-	40241958	40265267	789624	6	111,154,112,129,130,338,	0,575,13199,14967,23263,24052,
#Partially deleted in new
chr19	40242039	40280832	chr19:40242039-40280832	0	-	40242039	40265267	789624	6	30,154,112,129,130,51,	0,494,13118,14886,23182,38742,
#Partially deleted in new
chr19	40242055	40285092	chr19:40242055-40285092	0	-	40242055	40265267	789624	6	14,154,112,129,130,44,	0,478,13102,14870,23166,42993,
#Partially deleted in new
chr19	40242572	40284954	chr19:40242572-40284954	0	-	40242572	40265267	789624	5	115,112,129,130,91,	0,12585,14353,22649,42291,
#Partially deleted in new
chr19	40242573	40265547	chr19:40242573-40265547	0	-	40242573	40265267	789624	4	114,112,129,326,	0,12584,14352,22648,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	40242576	40270769	chr19:40242576-40270769	0	-	40242576	40265267	789624	7	111,112,129,130,102,118,272,	0,12581,14349,22645,26007,26846,27921,
#Partially deleted in new
chr19	40242583	40285536	chr19:40242583-40285536	0	-	40242583	40265267	789624	5	104,112,129,130,89,	0,12574,14342,22638,42864,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	40242615	40284822	chr19:40242615-40284822	0	-	40242615	40265267	789624	7	72,112,129,130,228,69,58,	0,12542,14310,22606,39601,40092,42149,
#Partially deleted in new
chr19	40242627	40285265	chr19:40242627-40285265	0	-	40242627	40265267	789624	5	60,142,129,130,85,	0,12530,14298,22594,42553,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	40242652	40284951	chr19:40242652-40284951	0	-	40242652	40265267	789624	6	35,112,129,130,88,88,	0,12505,14273,22569,39564,42211,
#Partially deleted in new
chr19	40242676	40284949	chr19:40242676-40284949	0	-	40242676	40265267	789624	5	11,112,129,130,185,	0,12481,14249,22545,42088,
#Partially deleted in new
chr19	40255157	40279639	chr19:40255157-40279639	0	-	40255157	40265267	789624	4	112,129,130,533,	0,1768,10064,23949,
#Partially deleted in new
chr19	40255157	40266359	chr19:40255157-40266359	0	-	40255157	40265267	789624	4	112,129,130,154,	0,1768,10064,11048,
#Partially deleted in new
chr19	40255243	40269589	chr19:40255243-40269589	0	-	40255243	40265267	789624	5	26,129,130,102,167,	0,1682,9978,13340,14179,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	40268641	40279224	chr19:40268641-40279224	0	-	40268641	40268641	8553170	2	444,118,	0,10465,
#Partially deleted in new
chr19	40273488	40275479	chr19:40273488-40275479	3	-	40273488	40273488	8553170	2	142,1320,	0,671,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	40282247	40283165	chr19:40282247-40283165	0	-	40282247	40282247	8553170	2	197,458,	0,460,
#Deleted in new
chr19	40282542	40282641	chr19:40282542-40282641	3	-	40282542	40282542	5263520	1	99,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	40319535	40348527	chr19:40319535-40348527	3	-	40321881	40348514	789624	9	2841,71,153,138,79,115,88,52,91,	0,4470,6798,8877,14315,16574,16784,22303,28901,
#Partially deleted in new
chr19	40321062	40348386	chr19:40321062-40348386	1	-	40321881	40336336	789624	9	1314,71,153,138,79,115,88,105,63,	0,2943,5271,7350,12788,15047,15257,20723,27261,
#Partially deleted in new
chr19	40321062	40326423	chr19:40321062-40326423	0	-	40321106	40326423	789624	4	56,333,71,90,	0,981,2943,5271,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	40321078	40324684	chr19:40321078-40324684	0	-	40321078	40321078	8553170	2	1298,679,	0,2927,
#Deleted in new
chr19	40321079	40322339	chr19:40321079-40322339	0	-	40321261	40322339	789624	2	271,312,	0,948,
#Partially deleted in new
chr19	40326408	40348519	chr19:40326408-40348519	0	-	40326408	40336336	789624	6	78,138,79,115,88,83,	0,2004,7442,9701,9911,22028,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	40328412	40343805	chr19:40328412-40343805	0	-	40328412	40341857	789624	6	138,79,115,88,52,331,	0,5438,7697,7907,13426,15062,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	40339058	40339164	chr19:40339058-40339164	3	-	40339058	40339058	8553170	1	106,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	40342328	40342441	chr19:40342328-40342441	3	+	40342328	40342328	8553170	1	113,	0,
#Partially deleted in new
chr19	40348455	40366880	chr19:40348455-40366880	0	+	40366483	40366880	789624	4	269,92,75,108,	0,17963,18154,18317,
#Partially deleted in new
chr19	40348506	40366464	chr19:40348506-40366464	0	+	40348506	40348506	8553170	3	218,213,46,	0,17211,17912,
#Partially deleted in new
chr19	40348583	40367836	chr19:40348583-40367836	0	+	40366483	40367836	789624	7	141,33,213,127,75,143,141,	0,16969,17134,17800,18026,18189,19112,
#Partially deleted in new
chr19	40348671	40366666	chr19:40348671-40366666	0	+	40366483	40366666	789624	4	53,378,92,57,	0,16881,17747,17938,
#Partially deleted in new
chr19	40348677	40378475	chr19:40348677-40378475	1	+	40366483	40378173	789624	12	91,127,75,143,184,121,128,201,140,166,100,490,	0,17706,17932,18095,19018,21230,21432,22995,25803,27931,29108,29308,
#Partially deleted in new
chr19	40348684	40378483	chr19:40348684-40378483	3	+	40366483	40378173	789624	13	84,213,127,75,143,184,121,128,201,140,166,100,498,	0,17033,17699,17925,18088,19011,21223,21425,22988,25796,27924,29101,29301,
#Partially deleted in new
chr19	40348689	40378483	chr19:40348689-40378483	1	+	40366483	40378173	789624	13	79,213,92,75,143,184,121,128,201,140,166,100,498,	0,17028,17729,17920,18083,19006,21218,21420,22983,25791,27919,29096,29296,
#Partially deleted in new
chr19	40348689	40366464	chr19:40348689-40366464	0	+	40348689	40348689	8553170	3	79,378,46,	0,16863,17729,
#Partially deleted in new
chr19	40348689	40367809	chr19:40348689-40367809	0	+	40366483	40367809	789624	5	79,92,75,143,114,	0,17729,17920,18083,19006,
#Partially deleted in new
chr19	40348699	40378483	chr19:40348699-40378483	1	+	40366483	40378173	789624	13	25,33,92,75,143,184,121,128,201,140,166,100,498,	0,16853,17719,17910,18073,18996,21208,21410,22973,25781,27909,29086,29286,
#Partially deleted in new
chr19	40348699	40366803	chr19:40348699-40366803	0	+	40366483	40366803	789624	5	69,269,92,75,31,	0,16962,17719,17910,18073,
#Partially deleted in new
chr19	40348703	40370200	chr19:40348703-40370200	0	+	40366483	40370200	789624	8	65,33,92,75,143,184,121,91,	0,16849,17715,17906,18069,18992,21204,21406,
#Partially deleted in new
chr19	40348703	40366915	chr19:40348703-40366915	0	+	40366483	40366915	789624	5	65,33,127,75,143,	0,16849,17680,17906,18069,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	40355841	40360606	chr19:40355841-40360606	3	+	40355841	40355841	8553170	1	4765,	0,
#Partially deleted in new
chr19	40359641	40378483	chr19:40359641-40378483	1	+	40366483	40378173	789624	13	54,213,92,75,143,184,121,128,201,140,166,100,498,	0,6076,6777,6968,7131,8054,10266,10468,12031,14839,16967,18144,18344,
#Deleted in new
chr19	40365894	40367263	chr19:40365894-40367263	0	+	40365894	40365894	8553170	4	36,92,75,491,	0,524,715,878,
#Partially deleted in new
chr19	40365993	40370011	chr19:40365993-40370011	0	+	40366483	40370011	789624	6	147,92,75,143,184,104,	0,425,616,779,1702,3914,
#Deleted in new
chr19	40366292	40366644	chr19:40366292-40366644	0	+	40366292	40366292	8553170	2	218,35,	0,317,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	40366437	40367844	chr19:40366437-40367844	0	+	40366437	40366437	8553170	2	73,1235,	0,172,
#Partially deleted in new
chr19	40366879	40371818	chr19:40366879-40371818	0	+	40366879	40369956	789624	5	36,279,121,128,146,	0,721,3028,3230,4793,
#Partially deleted in new
chr19	40367709	40370228	chr19:40367709-40370228	0	+	40367709	40370228	789624	3	170,51,111,	0,2198,2408,
#Deleted in new
chr19	40369845	40369907	chr19:40369845-40369907	3	+	40369845	40369845	5263520	1	62,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	40369908	40370892	chr19:40369908-40370892	0	+	40369908	40369908	8553170	2	120,783,	0,201,
#Partially deleted in new
chr19	40371476	40374814	chr19:40371476-40374814	0	+	40371476	40371476	8553170	2	397,334,	0,3004,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	40376266	40378127	chr19:40376266-40378127	0	+	40376266	40376266	8553170	3	508,100,142,	0,1519,1719,
#Partially deleted in new
chr19	40377859	40380439	chr19:40377859-40380439	0	+	40377859	40378173	789624	3	26,238,63,	0,126,2517,
#Partially deleted in new
chr19	40379270	40390187	chr19:40379270-40390187	3	-	40379586	40389902	789624	4	499,846,357,750,	0,1052,4512,10167,
#Partially deleted in new
chr19	40393767	40413364	chr19:40393767-40413364	3	-	40398556	40407932	0	6	5049,157,126,99,44,27,	0,9938,14138,14390,14572,19570,
#Partially deleted in new
chr19	40393767	40413366	chr19:40393767-40413366	1	-	40393965	40407932	0	7	4203,197,157,126,99,44,29,	0,4852,9938,14138,14390,14572,19570,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	40407456	40408243	chr19:40407456-40408243	0	-	40407456	40407456	8553170	3	263,126,86,	0,449,701,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	40421591	40426025	chr19:40421591-40426025	3	-	40422835	40423546	789624	2	1955,159,	0,4275,
#Partially deleted in new
chr19	40426114	40426702	chr19:40426114-40426702	3	+	40426114	40426114	8553170	1	588,	0,
#Partially deleted in new
chr19	40440843	40444705	chr19:40440843-40444705	3	-	40441489	40442080	789624	2	1243,491,	0,3371,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	40440843	40442598	chr19:40440843-40442598	1	-	40441489	40442080	789624	2	1243,272,	0,1483,
#Partially deleted in new
chr19	40440846	40441385	chr19:40440846-40441385	0	-	40440846	40440846	8553170	2	313,85,	0,454,
#Partially deleted in new
chr19	40441547	40444062	chr19:40441547-40444062	0	-	40441547	40442080	789624	2	539,208,	0,2307,
#Partially deleted in new
chr19	40441805	40444275	chr19:40441805-40444275	0	-	40441805	40442080	789624	3	281,193,61,	0,517,2409,
#Partially deleted in new
chr19	40443435	40444087	chr19:40443435-40444087	3	+	40443435	40443435	8553170	2	343,215,	0,437,
#Partially deleted in new
chr19	40447764	40465764	chr19:40447764-40465764	1	-	40447888	40465688	789624	4	282,129,372,155,	0,3599,10409,17845,
#Partially deleted in new
chr19	40447788	40465840	chr19:40447788-40465840	3	-	40447888	40465688	0	5	258,129,90,165,231,	0,3575,10366,10592,17821,
#Partially deleted in new
chr19	40447788	40465745	chr19:40447788-40465745	1	-	40447888	40465688	789624	4	258,90,165,136,	0,10366,10592,17821,
#Partially deleted in new
chr19	40447794	40465759	chr19:40447794-40465759	0	-	40451441	40465688	789624	5	252,129,71,165,150,	0,3569,10379,10586,17815,
#Partially deleted in new
chr19	40447802	40458457	chr19:40447802-40458457	0	-	40447802	40447802	8553170	3	244,129,303,	0,3561,10352,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	40447820	40465735	chr19:40447820-40465735	0	-	40458023	40465688	789624	5	226,129,746,165,126,	0,3543,9678,10560,17789,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	40450224	40450480	chr19:40450224-40450480	3	+	40450224	40450224	8553170	1	256,	0,
#Partially deleted in new
chr19	40466240	40576464	chr19:40466240-40576464	3	+	40472621	40575569	789624	36	71,184,152,174,92,81,116,113,188,118,159,303,151,949,138,751,203,91,147,264,225,90,279,131,205,381,245,139,85,197,620,70,293,174,43,1054,	0,6366,21456,23834,26722,28656,31248,35680,35887,36149,36534,37589,39995,46365,49070,53160,57196,62800,66384,67839,82948,83997,87906,88275,89843,90782,93918,99182,99420,99922,101422,103416,104195,105778,106097,109170,
#Partially deleted in new
chr19	40466240	40576459	chr19:40466240-40576459	1	+	40472621	40575569	789624	37	71,184,152,174,92,81,116,113,188,118,159,303,151,949,138,751,203,91,147,264,210,14,91,279,131,205,381,245,139,85,197,620,70,293,174,43,1049,	0,6366,21456,23834,26722,28656,31248,35680,35887,36149,36534,37589,39995,46365,49070,53160,57196,62800,66384,67839,82948,83159,83996,87906,88275,89843,90782,93918,99182,99420,99922,101422,103416,104195,105778,106097,109170,
#Partially deleted in new
chr19	40466240	40560507	chr19:40466240-40560507	1	+	40472621	40560497	789624	27	71,184,152,174,92,81,116,113,188,118,159,303,151,949,138,751,203,91,147,264,225,90,279,131,205,381,349,	0,6366,21456,23834,26722,28656,31248,35680,35887,36149,36534,37589,39995,46365,49070,53160,57196,62800,66384,67839,82948,83997,87906,88275,89843,90782,93918,
#Partially deleted in new
chr19	40467218	40576458	chr19:40467218-40576458	1	+	40472621	40575569	789624	37	87,184,152,174,92,81,116,113,188,118,159,303,151,949,138,751,203,91,147,264,210,14,91,279,131,205,381,245,139,85,197,620,70,293,174,43,1048,	0,5388,20478,22856,25744,27678,30270,34702,34909,35171,35556,36611,39017,45387,48092,52182,56218,61822,65406,66861,81970,82181,83018,86928,87297,88865,89804,92940,98204,98442,98944,100444,102438,103217,104800,105119,108192,
#Partially deleted in new
chr19	40467218	40575842	chr19:40467218-40575842	1	+	40472621	40575569	789624	36	87,184,152,174,92,81,116,113,188,118,159,303,151,949,138,751,203,91,147,264,225,90,279,131,205,381,245,139,85,197,620,70,293,174,43,432,	0,5388,20478,22856,25744,27678,30270,34702,34909,35171,35556,36611,39017,45387,48092,52182,56218,61822,65406,66861,81970,83019,86928,87297,88865,89804,92940,98204,98442,98944,100444,102438,103217,104800,105119,108192,
#Partially deleted in new
chr19	40497428	40502492	chr19:40497428-40502492	0	+	40497428	40497428	8553170	4	176,113,188,103,	0,4492,4699,4961,
#Partially deleted in new
chr19	40512613	40575569	chr19:40512613-40575569	0	+	40512613	40524616	789624	24	941,138,751,203,86,91,147,264,225,90,279,131,205,381,245,139,85,197,620,70,293,174,43,159,	0,2697,6787,10823,11930,16427,20011,21466,36575,37624,41533,41902,43470,44409,47545,52809,53047,53549,55049,57043,57822,59405,59724,62797,
#Partially deleted in new
chr19	40530487	40560752	chr19:40530487-40560752	1	+	40532648	40560497	789624	10	103,147,264,225,90,279,131,205,381,594,	0,2137,3592,18701,19750,23659,24028,25596,26535,29671,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	40530525	40555302	chr19:40530525-40555302	0	+	40530525	40530525	8553170	7	65,147,264,225,90,279,787,	0,2099,3554,18663,19712,23621,23990,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	40530765	40534856	chr19:40530765-40534856	0	+	40530765	40530765	8553170	3	91,147,777,	0,1859,3314,
#Partially deleted in new
chr19	40571038	40575663	chr19:40571038-40575663	0	+	40571038	40571038	8553170	4	55,174,43,253,	0,980,1299,4372,
#Partially deleted in new
chr19	40571045	40575605	chr19:40571045-40575605	0	+	40571045	40571045	8553170	4	48,174,295,195,	0,973,1292,4365,
#Partially deleted in new
chr19	40571543	40576458	chr19:40571543-40576458	0	+	40571543	40571543	8553170	2	837,1048,	0,3867,
#Partially deleted in new
chr19	40571639	40575577	chr19:40571639-40575577	0	+	40571639	40571639	8553170	3	553,43,167,	0,698,3771,
#Partially deleted in new
chr19	40576850	40591397	chr19:40576850-40591397	3	+	40576899	40591207	0	18	135,54,46,74,59,81,162,91,191,116,88,117,171,156,97,179,124,422,	0,380,545,706,1303,1611,3473,3715,3895,5500,6547,6750,9923,11773,12231,13393,13879,14125,
#Partially deleted in new
chr19	40576852	40580650	chr19:40576852-40580650	0	+	40576899	40577679	789624	8	133,54,46,153,59,81,162,85,	0,378,543,704,1301,1609,3471,3713,
#Partially deleted in new
chr19	40576854	40591397	chr19:40576854-40591397	1	+	40576899	40591207	789624	18	131,54,46,74,59,81,162,91,191,41,88,117,171,156,97,179,124,422,	0,376,541,702,1299,1607,3469,3711,3891,5571,6543,6746,9919,11769,12227,13389,13875,14121,
#Partially deleted in new
chr19	40576864	40580866	chr19:40576864-40580866	0	+	40576899	40580335	789624	9	121,54,46,74,59,95,162,91,121,	0,366,531,692,1289,1583,3459,3701,3881,
#Partially deleted in new
chr19	40576866	40580838	chr19:40576866-40580838	0	+	40576899	40578129	789624	9	119,54,46,74,90,81,162,91,93,	0,364,529,690,1256,1595,3457,3699,3879,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	40576886	40577929	chr19:40576886-40577929	0	+	40576886	40576886	8553170	4	99,54,46,373,	0,344,509,670,
#Partially deleted in new
chr19	40576915	40591368	chr19:40576915-40591368	0	+	40576915	40591207	789624	16	70,54,46,74,59,81,162,91,191,116,88,117,171,156,124,393,	0,315,480,641,1238,1546,3408,3650,3830,5435,6482,6685,9858,11708,13814,14060,
#Partially deleted in new
chr19	40577081	40580395	chr19:40577081-40580395	0	+	40577081	40577081	8553170	6	203,46,74,90,81,72,	0,314,475,1041,1380,3242,
#Partially deleted in new
chr19	40577157	40580627	chr19:40577157-40580627	0	+	40577427	40580627	789624	6	127,46,74,81,162,62,	0,238,399,1304,3166,3408,
#Partially deleted in new
chr19	40577157	40580463	chr19:40577157-40580463	0	+	40577157	40577157	8553170	4	284,74,81,140,	0,399,1304,3166,
#Partially deleted in new
chr19	40577175	40580472	chr19:40577175-40580472	0	+	40577427	40578122	789624	6	109,46,74,116,81,149,	0,220,381,921,1286,3148,
#Partially deleted in new
chr19	40577177	40578177	chr19:40577177-40578177	0	+	40577177	40577177	8553170	3	107,235,24,	0,218,976,
#Partially deleted in new
chr19	40577228	40591395	chr19:40577228-40591395	0	+	40577228	40577228	8553170	16	213,74,59,81,162,91,191,116,88,117,171,156,97,179,124,420,	0,328,925,1233,3095,3337,3517,5122,6169,6372,9545,11395,11853,13015,13501,13747,
#Partially deleted in new
chr19	40578195	40580883	chr19:40578195-40580883	0	+	40578195	40578195	8553170	4	347,162,91,138,	0,2128,2370,2550,
#Partially deleted in new
chr19	40580166	40591395	chr19:40580166-40591395	0	+	40580166	40580166	8553170	12	319,91,191,116,88,117,171,156,97,179,124,420,	0,399,579,2184,3231,3434,6607,8457,8915,10077,10563,10809,
#Partially deleted in new
chr19	40580898	40582515	chr19:40580898-40582515	0	+	40580898	40580898	8553170	2	38,165,	0,1452,
#Partially deleted in new
chr19	40583459	40588803	chr19:40583459-40588803	0	+	40583459	40583459	8553170	4	26,117,171,180,	0,141,3314,5164,
#Partially deleted in new
chr19	40583465	40591179	chr19:40583465-40591179	0	+	40583465	40591179	789624	7	20,117,156,97,179,124,204,	0,135,5158,5616,6778,7264,7510,
#Partially deleted in new
chr19	40583608	40591288	chr19:40583608-40591288	0	+	40583608	40591207	789624	5	109,171,156,121,313,	0,3165,5015,7124,7367,
#Partially deleted in new
chr19	40583648	40591368	chr19:40583648-40591368	0	+	40583648	40591207	789624	5	69,171,156,124,393,	0,3125,4975,7081,7327,
#Partially deleted in new
chr19	40586692	40590806	chr19:40586692-40590806	0	+	40586692	40586692	8553170	5	252,156,97,179,77,	0,1931,2389,3551,4037,
#Partially deleted in new
chr19	40586773	40591396	chr19:40586773-40591396	0	+	40586773	40591207	789624	3	171,124,421,	0,3956,4202,
#Partially deleted in new
chr19	40586854	40591296	chr19:40586854-40591296	0	+	40586854	40590778	789624	5	90,156,97,121,321,	0,1769,2227,3878,4121,
#Partially deleted in new
chr19	40586895	40591392	chr19:40586895-40591392	0	+	40586895	40591207	789624	6	49,156,97,179,121,417,	0,1728,2186,3348,3837,4080,
#Deleted in new
chr19	40588738	40591397	chr19:40588738-40591397	0	+	40588738	40591207	789624	4	41,97,124,422,	0,343,1991,2237,
#Deleted in new
chr19	40589100	40591399	chr19:40589100-40591399	0	+	40589100	40591207	789624	3	78,121,424,	0,1632,1875,
#Deleted in new
chr19	40590208	40591087	chr19:40590208-40591087	0	+	40590208	40590208	8553170	3	214,124,112,	0,521,767,
#Partially deleted in new
chr19	40592882	40605153	chr19:40592882-40605153	0	+	40593165	40599480	789624	5	299,59,136,110,119,	0,6314,6538,7185,12152,
#Partially deleted in new
chr19	40593165	40629818	chr19:40593165-40629818	1	+	40593165	40629550	789624	33	16,59,155,110,192,248,103,75,123,165,150,120,132,126,126,243,126,120,132,126,123,132,132,126,147,267,72,129,147,153,381,153,423,	0,6031,6236,6902,11869,12239,12563,13067,13238,14199,15054,15318,16364,16580,17366,17986,18693,18907,19899,20238,20750,21149,23723,23934,26181,29235,29784,30438,30770,32691,33809,34539,36230,
#Partially deleted in new
chr19	40594526	40605606	chr19:40594526-40605606	0	+	40594537	40599480	789624	6	27,59,136,110,192,202,	0,4670,4894,5541,10508,10878,
#Partially deleted in new
chr19	40597234	40629623	chr19:40597234-40629623	3	+	40597234	40629550	789624	33	146,59,136,110,192,248,103,75,123,165,150,120,132,126,126,243,126,120,132,126,123,132,132,126,147,267,72,129,147,153,381,153,228,	0,1962,2186,2833,7800,8170,8494,8998,9169,10130,10985,11249,12295,12511,13297,13917,14624,14838,15830,16169,16681,17080,19654,19865,22112,25166,25715,26369,26701,28622,29740,30470,32161,
#Partially deleted in new
chr19	40598524	40605466	chr19:40598524-40605466	0	+	40598528	40599480	789624	6	98,59,136,110,192,62,	0,672,896,1543,6510,6880,
#Partially deleted in new
chr19	40599675	40613180	chr19:40599675-40613180	0	+	40599675	40599675	8553170	5	428,21,126,120,116,	0,11698,12183,12397,13389,
#Partially deleted in new
chr19	40599983	40605142	chr19:40599983-40605142	0	+	40599983	40599983	8553170	2	194,108,	0,5051,
#Partially deleted in new
chr19	40601370	40629623	chr19:40601370-40629623	1	+	40601387	40629550	789624	30	267,192,248,103,75,123,165,150,120,132,126,126,243,126,120,132,126,123,132,132,126,147,267,72,129,147,153,381,153,228,	0,3664,4034,4358,4862,5033,5994,6849,7113,8159,8375,9161,9781,10488,10702,11694,12033,12545,12944,15518,15729,17976,21030,21579,22233,22565,24486,25604,26334,28025,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	40606465	40608921	chr19:40606465-40608921	0	+	40606465	40606465	8553170	4	61,165,150,438,	0,899,1754,2018,
#Partially deleted in new
chr19	40609745	40629817	chr19:40609745-40629817	0	+	40609745	40629550	789624	19	126,126,126,120,132,126,123,132,132,126,147,267,72,129,147,153,381,153,422,	0,786,2113,2327,3319,3658,4170,4569,7143,7354,9601,12655,13204,13858,14190,16111,17229,17959,19650,
#Deleted in new
chr19	40610167	40613828	chr19:40610167-40613828	0	+	40610167	40610167	8553170	5	490,118,120,132,425,	0,1691,1905,2897,3236,
#Deleted in new
chr19	40610212	40611922	chr19:40610212-40611922	0	+	40610212	40610212	8553170	3	445,243,64,	0,939,1646,
#Deleted in new
chr19	40610764	40613446	chr19:40610764-40613446	0	+	40610764	40610764	8553170	5	147,126,120,132,43,	0,1094,1308,2300,2639,
#Partially deleted in new
chr19	40611910	40627720	chr19:40611910-40627720	0	+	40611910	40627720	789624	14	74,120,132,126,123,132,147,267,72,129,147,153,381,16,	0,162,1154,1493,2005,2404,7436,10490,11039,11693,12025,13946,15064,15794,
#Partially deleted in new
chr19	40613134	40622439	chr19:40613134-40622439	0	+	40613134	40622439	789624	7	62,126,123,132,126,147,39,	0,269,781,1180,3965,6212,9266,
#Partially deleted in new
chr19	40613372	40619382	chr19:40613372-40619382	0	+	40613372	40613372	8553170	5	157,123,132,132,36,	0,543,942,3516,5974,
#Partially deleted in new
chr19	40613374	40619388	chr19:40613374-40619388	0	+	40613374	40613374	8553170	5	155,123,132,126,42,	0,541,940,3725,5972,
#Partially deleted in new
chr19	40613413	40619376	chr19:40613413-40619376	0	+	40613413	40613413	8553170	5	116,123,132,126,30,	0,502,901,3686,5933,
#Partially deleted in new
chr19	40613447	40626006	chr19:40613447-40626006	0	+	40613447	40626006	789624	7	82,123,132,147,129,147,150,	0,468,867,5899,10156,10488,12409,
#Partially deleted in new
chr19	40613455	40622462	chr19:40613455-40622462	0	+	40613455	40622462	789624	6	74,123,132,132,147,62,	0,460,859,3433,5891,8945,
#Partially deleted in new
chr19	40613595	40629817	chr19:40613595-40629817	0	+	40613595	40613595	8553170	11	443,132,147,267,72,129,147,153,381,153,422,	0,719,5751,8805,9354,10008,10340,12261,13379,14109,15800,
#Partially deleted in new
chr19	40613595	40616984	chr19:40613595-40616984	0	+	40613595	40613595	8553170	3	443,132,96,	0,719,3293,
#Partially deleted in new
chr19	40613717	40623633	chr19:40613717-40623633	0	+	40613717	40613717	8553170	5	321,132,126,147,30,	0,597,3382,5629,9886,
#Partially deleted in new
chr19	40613915	40623642	chr19:40613915-40623642	0	+	40613915	40623642	789624	5	123,132,132,147,39,	0,399,2973,5431,9688,
#Partially deleted in new
chr19	40613915	40622439	chr19:40613915-40622439	0	+	40613915	40622439	789624	5	123,132,126,147,39,	0,399,3184,5431,8485,
#Partially deleted in new
chr19	40614110	40629649	chr19:40614110-40629649	0	+	40614110	40614110	8553170	8	336,147,129,147,153,381,153,254,	0,5236,9493,9825,11746,12864,13594,15285,
#Partially deleted in new
chr19	40614141	40624046	chr19:40614141-40624046	0	+	40614141	40614141	8553170	4	305,147,129,111,	0,5205,9462,9794,
#Partially deleted in new
chr19	40614141	40617020	chr19:40614141-40617020	0	+	40614141	40614141	8553170	3	305,40,132,	0,1196,2747,
#Partially deleted in new
chr19	40614143	40622462	chr19:40614143-40622462	0	+	40614143	40614143	8553170	3	303,147,62,	0,5203,8257,
#Partially deleted in new
chr19	40614175	40617197	chr19:40614175-40617197	0	+	40614175	40614175	8553170	2	271,309,	0,2713,
#Partially deleted in new
chr19	40614175	40623649	chr19:40614175-40623649	0	+	40614175	40614175	8553170	4	271,126,147,46,	0,2924,5171,9428,
#Partially deleted in new
chr19	40614179	40622405	chr19:40614179-40622405	0	+	40614179	40614179	8553170	4	267,154,147,5,	0,2709,5167,8221,
#Partially deleted in new
chr19	40614191	40623645	chr19:40614191-40623645	0	+	40614191	40614191	8553170	4	255,132,147,42,	0,2697,5155,9412,
#Partially deleted in new
chr19	40616909	40623969	chr19:40616909-40623969	0	+	40616909	40623969	789624	5	111,126,147,129,34,	0,190,2437,6694,7026,
#Partially deleted in new
chr19	40622387	40623946	chr19:40622387-40623946	0	+	40622387	40622387	8553170	3	280,129,11,	0,1216,1548,
#Partially deleted in new
chr19	40622904	40623932	chr19:40622904-40623932	0	+	40622904	40622904	8553170	2	117,329,	0,699,
#Partially deleted in new
chr19	40623905	40625964	chr19:40623905-40625964	0	+	40623905	40623905	8553170	2	177,108,	0,1951,
#Partially deleted in new
chr19	40627193	40629499	chr19:40627193-40629499	0	+	40627193	40629499	789624	3	56,121,104,	0,543,2202,
#Partially deleted in new
chr19	40627258	40629811	chr19:40627258-40629811	0	+	40627258	40629550	789624	3	97,153,449,	0,446,2104,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	40665904	40690651	chr19:40665904-40690651	3	-	40667467	40690483	0	10	2234,123,306,190,141,75,75,140,85,192,	0,3993,7439,11327,15012,16823,16989,18512,21006,24555,
#Partially deleted in new
chr19	40667033	40690553	chr19:40667033-40690553	1	-	40667467	40684542	789624	9	1105,123,306,190,141,75,75,140,94,	0,2864,6310,10198,13883,15694,15860,17383,23426,
#Partially deleted in new
chr19	40667340	40690122	chr19:40667340-40690122	1	-	40667467	40684542	789624	9	798,123,306,190,141,75,75,140,83,	0,2557,6003,9891,13576,15387,15553,17076,22699,
#Partially deleted in new
chr19	40673443	40682924	chr19:40673443-40682924	0	-	40673443	40682924	789624	5	203,190,141,75,31,	0,3788,7473,9284,9450,
#Partially deleted in new
chr19	40673521	40682855	chr19:40673521-40682855	0	-	40673521	40673521	8553170	4	128,190,141,128,	0,3710,7395,9206,
#Partially deleted in new
chr19	40673551	40689592	chr19:40673551-40689592	0	-	40673551	40684542	789624	8	98,190,141,75,75,140,85,30,	0,3680,7365,9176,9342,10865,13359,16011,
#Partially deleted in new
chr19	40680986	40690972	chr19:40680986-40690972	0	-	40680986	40684542	789624	6	71,75,75,140,85,113,	0,1741,1907,3430,5924,9873,
#Partially deleted in new
chr19	40680997	40684955	chr19:40680997-40684955	0	-	40680997	40680997	8553170	4	60,75,75,539,	0,1730,1896,3419,
#Partially deleted in new
chr19	40681002	40690164	chr19:40681002-40690164	0	-	40681002	40684542	789624	6	55,75,75,140,85,125,	0,1725,1891,3414,5908,9037,
#Partially deleted in new
chr19	40683023	40690608	chr19:40683023-40690608	0	-	40683023	40683023	8553170	4	19,140,85,149,	0,1393,3887,7436,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	40684087	40686149	chr19:40684087-40686149	0	-	40684087	40684087	8553170	1	2062,	0,
#Partially deleted in new
chr19	40691528	40716885	chr19:40691528-40716885	3	-	40692034	40714632	789624	15	845,87,66,108,142,94,82,141,86,123,78,67,120,105,299,	0,1422,4460,8538,8781,11071,12012,12186,13567,13796,18530,22538,22749,23002,25058,
#Partially deleted in new
chr19	40691529	40715073	chr19:40691529-40715073	1	-	40692034	40714632	789624	14	844,87,66,108,142,94,82,141,86,78,67,120,105,21,	0,1421,4459,8537,8780,11070,12011,12185,13566,18529,22537,22748,23001,23523,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	40691529	40701459	chr19:40691529-40701459	0	-	40691529	40691529	8553170	5	844,87,66,108,1150,	0,1421,4459,8537,8780,
#Partially deleted in new
chr19	40700404	40715085	chr19:40700404-40715085	0	-	40700404	40710098	789624	10	47,94,82,141,86,123,78,67,120,29,	0,2195,3136,3310,4691,4920,9654,13662,13873,14652,
#Partially deleted in new
chr19	40702598	40715785	chr19:40702598-40715785	0	-	40702598	40702598	8553170	8	95,82,141,352,78,67,120,79,	0,942,1116,2497,7460,11468,11679,13108,
#Partially deleted in new
chr19	40702599	40715967	chr19:40702599-40715967	0	-	40703609	40714632	789624	7	94,254,86,27,120,105,49,	0,769,2496,11507,11678,11931,13319,
#Partially deleted in new
chr19	40703721	40714785	chr19:40703721-40714785	0	-	40714129	40714632	789624	7	134,86,123,78,87,120,255,	0,1374,1603,6337,10345,10556,10809,
#Partially deleted in new
chr19	40703741	40715098	chr19:40703741-40715098	0	-	40703741	40714632	789624	8	114,86,123,78,67,120,105,42,	0,1354,1583,6317,10325,10536,10789,11315,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	40704167	40716885	chr19:40704167-40716885	0	-	40704167	40704167	8553170	6	1280,78,67,120,105,299,	0,5891,9899,10110,10363,12419,
#Partially deleted in new
chr19	40705117	40715084	chr19:40705117-40715084	0	-	40705117	40710098	789624	6	57,123,78,67,120,28,	0,207,4941,8949,9160,9939,
#Partially deleted in new
chr19	40705311	40715106	chr19:40705311-40715106	0	-	40705311	40705311	8553170	5	136,78,67,120,50,	0,4747,8755,8966,9745,
#Partially deleted in new
chr19	40705333	40714635	chr19:40705333-40714635	0	-	40705333	40714632	789624	4	114,67,120,105,	0,8733,8944,9197,
#Partially deleted in new
chr19	40705341	40718207	chr19:40705341-40718207	0	-	40705341	40714632	789624	6	106,78,67,120,105,118,	0,4717,8725,8936,9189,12748,
#Partially deleted in new
chr19	40705366	40716896	chr19:40705366-40716896	0	-	40705366	40714632	789624	6	81,78,67,120,105,35,	0,4692,8700,8911,9164,11495,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	40708054	40708163	chr19:40708054-40708163	3	-	40708054	40708054	8553170	1	109,	0,
#Partially deleted in new
chr19	40710061	40715613	chr19:40710061-40715613	0	-	40710061	40714632	789624	5	75,67,120,105,27,	0,4005,4216,4469,5525,
#Partially deleted in new
chr19	40710094	40715071	chr19:40710094-40715071	0	-	40710094	40714632	789624	5	42,67,120,105,39,	0,3972,4183,4436,4938,
#Deleted in new
chr19	40714602	40715616	chr19:40714602-40715616	0	-	40714602	40714632	789624	2	33,292,	0,722,
#Partially deleted in new
chr19	40717102	40740860	chr19:40717102-40740860	3	+	40717135	40739560	0	7	1188,100,214,205,102,72,1504,	0,8237,12099,16057,19883,20595,22254,
#Partially deleted in new
chr19	40729320	40739669	chr19:40729320-40739669	0	+	40729320	40737043	789624	4	95,102,72,313,	0,7665,8377,10036,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	40740855	40749923	chr19:40740855-40749923	3	-	40742432	40749803	789624	6	1915,71,130,125,69,443,	0,3049,3211,3703,4274,8625,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	40740855	40750553	chr19:40740855-40750553	0	-	40742551	40744661	789624	9	584,171,256,61,130,125,69,127,269,	0,838,1659,3059,3211,3703,4274,8625,9429,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	40740855	40750492	chr19:40740855-40750492	1	-	40743910	40744661	789624	6	1915,77,125,69,127,208,	0,3049,3703,4274,8625,9429,
#Partially deleted in new
chr19	40740860	40749553	chr19:40740860-40749553	0	-	40743910	40749553	789624	5	148,77,125,69,73,	0,3044,3698,4269,8620,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	40740861	40741680	chr19:40740861-40741680	0	-	40740861	40740861	8553170	2	204,315,	0,504,
#Partially deleted in new
chr19	40740861	40750302	chr19:40740861-40750302	1	-	40740996	40744683	789624	6	147,67,125,69,127,18,	0,3053,3697,4268,8619,9423,
#Partially deleted in new
chr19	40741691	40751553	chr19:40741691-40751553	0	-	40743910	40744661	789624	7	173,372,77,125,69,127,161,	0,707,2213,2867,3438,7789,9701,
#Partially deleted in new
chr19	40741790	40750448	chr19:40741790-40750448	0	-	40743910	40744661	789624	8	74,117,194,77,125,69,127,164,	0,282,786,2114,2768,3339,7690,8494,
#Partially deleted in new
chr19	40741821	40749605	chr19:40741821-40749605	0	-	40741821	40749605	789624	6	43,117,67,125,69,125,	0,251,2093,2737,3308,7659,
#Partially deleted in new
chr19	40744943	40749594	chr19:40744943-40749594	0	-	40745116	40749594	789624	2	255,114,	0,4537,
#Partially deleted in new
chr19	40750636	40765021	chr19:40750636-40765021	0	+	40757408	40765021	789624	6	65,173,180,174,89,14,	0,6695,8794,12264,12950,14371,
#Partially deleted in new
chr19	40750858	40765389	chr19:40750858-40765389	3	+	40751408	40765167	0	6	623,173,180,174,89,382,	0,6473,8572,12042,12728,14149,
#Partially deleted in new
chr19	40750866	40759579	chr19:40750866-40759579	0	+	40751408	40759579	789624	4	111,95,173,140,	0,520,6465,8573,
#Partially deleted in new
chr19	40750867	40762920	chr19:40750867-40762920	0	+	40751408	40762920	789624	5	70,95,173,180,20,	0,519,6464,8563,12033,
#Partially deleted in new
chr19	40750870	40759610	chr19:40750870-40759610	0	+	40751408	40759610	789624	4	107,95,173,180,	0,516,6461,8560,
#Partially deleted in new
chr19	40750874	40759610	chr19:40750874-40759610	0	+	40750874	40750874	8553170	3	607,138,180,	0,6492,8556,
#Partially deleted in new
chr19	40751208	40765150	chr19:40751208-40765150	0	+	40751408	40765150	789624	6	273,110,180,174,89,143,	0,6123,8222,11692,12378,13799,
#Partially deleted in new
chr19	40751273	40763291	chr19:40751273-40763291	0	+	40751273	40751273	8553170	4	208,173,180,391,	0,6058,8157,11627,
#Partially deleted in new
chr19	40757035	40759640	chr19:40757035-40759640	0	+	40757035	40757035	8553170	2	469,210,	0,2395,
#Partially deleted in new
chr19	40763540	40765208	chr19:40763540-40765208	0	+	40763540	40763540	8553170	2	135,201,	0,1467,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	40771647	40775761	chr19:40771647-40775761	2	+	40775542	40775761	789624	3	416,133,10,	0,3889,4104,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	40771647	40796943	chr19:40771647-40796943	3	+	40775542	40780042	789624	11	416,133,134,111,81,115,63,155,96,131,374,	0,3889,4104,5321,8371,8737,12130,12273,15017,15200,24922,
#Partially deleted in new
chr19	40775176	40777490	chr19:40775176-40777490	1	+	40775542	40777420	0	5	35,133,134,111,94,	0,360,575,1792,2220,
#Partially deleted in new
chr19	40775263	40777427	chr19:40775263-40777427	1	+	40775542	40777420	0	5	46,133,134,111,31,	0,273,488,1705,2133,
#Partially deleted in new
chr19	40775376	40777490	chr19:40775376-40777490	1	+	40775542	40777420	0	4	293,134,111,94,	0,375,1592,2020,
#Partially deleted in new
chr19	40775546	40777490	chr19:40775546-40777490	0	+	40775546	40777050	789624	4	123,82,111,94,	0,205,1422,1850,
#Partially deleted in new
chr19	40775549	40777490	chr19:40775549-40777490	0	+	40775549	40777024	789624	3	120,111,94,	0,1419,1847,
#Deleted in new
chr19	40776793	40777490	chr19:40776793-40777490	0	+	40776793	40776793	8553170	2	286,94,	0,603,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	40778215	40792572	chr19:40778215-40792572	1	+	40778375	40786963	0	8	176,81,115,63,155,96,131,356,	0,1803,2169,5562,5705,8449,8632,14001,
#Partially deleted in new
chr19	40778241	40800443	chr19:40778241-40800443	0	+	40778241	40778241	8553170	4	150,96,131,105,	0,8423,8606,22097,
#Partially deleted in new
chr19	40778249	40786760	chr19:40778249-40786760	0	+	40778249	40778249	8553170	5	142,79,115,155,96,	0,1769,2135,5671,8415,
#Partially deleted in new
chr19	40778265	40796935	chr19:40778265-40796935	3	+	40778375	40786963	0	8	126,81,115,63,155,96,131,366,	0,1753,2119,5512,5655,8399,8582,18304,
#Partially deleted in new
chr19	40778270	40808418	chr19:40778270-40808418	3	+	40778375	40786963	789624	12	121,81,115,63,155,96,131,1077,120,137,68,610,	0,1748,2114,5507,5650,8394,8577,22068,28284,28867,29213,29538,
#Partially deleted in new
chr19	40778273	40783973	chr19:40778273-40783973	0	+	40778273	40778273	8553170	4	118,481,63,53,	0,1745,5504,5647,
#Partially deleted in new
chr19	40778308	40796890	chr19:40778308-40796890	0	+	40778375	40786755	789624	7	83,81,115,63,96,131,321,	0,1710,2076,5469,8356,8539,18261,
#Partially deleted in new
chr19	40778377	40786978	chr19:40778377-40786978	0	+	40778377	40786963	789624	6	14,81,115,155,96,131,	0,1641,2007,5543,8287,8470,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	40779046	40796938	chr19:40779046-40796938	0	+	40779046	40779046	8553170	7	1053,115,63,155,96,131,369,	0,1338,4731,4874,7618,7801,17523,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	40779779	40796943	chr19:40779779-40796943	3	-	40779779	40779779	8553170	3	112,274,717,	0,14746,16447,
#Partially deleted in new
chr19	40780070	40800396	chr19:40780070-40800396	0	+	40780070	40780070	8553170	6	429,63,155,96,131,58,	0,3707,3850,6594,6777,20268,
#Partially deleted in new
chr19	40785532	40796938	chr19:40785532-40796938	0	+	40785532	40785532	8553170	3	1228,131,369,	0,1315,11037,
#Deleted in new
chr19	40798995	40800875	chr19:40798995-40800875	0	+	40800572	40800875	789624	2	53,537,	0,1343,
#Partially deleted in new
chr19	40799186	40808432	chr19:40799186-40808432	3	+	40800572	40807864	0	6	76,1077,120,137,68,624,	0,1152,7368,7951,8297,8622,
#Deleted in new
chr19	40799424	40800991	chr19:40799424-40800991	0	+	40800572	40800991	789624	2	282,653,	0,914,
#Partially deleted in new
chr19	40799514	40808432	chr19:40799514-40808432	1	+	40800572	40807864	0	6	124,1077,120,137,68,624,	0,824,7040,7623,7969,8294,
#Partially deleted in new
chr19	40799544	40808433	chr19:40799544-40808433	1	+	40800572	40807864	0	5	1871,120,137,68,625,	0,7010,7593,7939,8264,
#Deleted in new
chr19	40799706	40800835	chr19:40799706-40800835	0	+	40800572	40800835	789624	2	100,497,	0,632,
#Deleted in new
chr19	40799709	40800789	chr19:40799709-40800789	0	+	40800572	40800789	789624	2	121,451,	0,629,
#Deleted in new
chr19	40799709	40800854	chr19:40799709-40800854	0	+	40800572	40800854	789624	2	68,516,	0,629,
#Deleted in new
chr19	40799724	40800803	chr19:40799724-40800803	0	+	40800572	40800803	789624	2	244,465,	0,614,
#Deleted in new
chr19	40799834	40800774	chr19:40799834-40800774	0	+	40800572	40800774	789624	2	138,436,	0,504,
#Partially deleted in new
chr19	40801289	40807936	chr19:40801289-40807936	0	+	40801289	40807864	789624	4	126,137,68,128,	0,5848,6194,6519,
#Partially deleted in new
chr19	40801296	40898282	chr19:40801296-40898282	3	+	40801296	40892071	789624	4	119,162,149,145,	0,90694,92547,96841,
#Deleted in new
chr19	40803139	40808378	chr19:40803139-40808378	1	+	40806557	40807864	789624	5	96,120,137,68,570,	0,3415,3998,4344,4669,
#Deleted in new
chr19	40804072	40808432	chr19:40804072-40808432	0	+	40804072	40804072	8553170	3	3202,68,624,	0,3411,3736,
#Deleted in new
chr19	40804469	40808432	chr19:40804469-40808432	0	+	40804469	40804469	8553170	4	2205,137,68,624,	0,2668,3014,3339,
#Deleted in new
chr19	40806321	40808432	chr19:40806321-40808432	0	+	40806321	40806321	8553170	3	353,414,624,	0,816,1487,
#Deleted in new
chr19	40806918	40808068	chr19:40806918-40808068	0	+	40806918	40806918	8553170	3	356,68,260,	0,565,890,
#Deleted in new
chr19	40807141	40808108	chr19:40807141-40808108	0	+	40807141	40807640	789624	2	133,625,	0,342,
#Deleted in new
chr19	40807242	40808432	chr19:40807242-40808432	0	+	40807242	40807864	789624	4	32,68,105,272,	0,241,566,918,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	40808473	40811097	chr19:40808473-40811097	5	-	40808473	40808473	16724991	2	2022,513,	0,2111,
#Partially deleted in new
chr19	40808524	40812100	chr19:40808524-40812100	7	-	40808524	40808524	16724991	9	183,139,186,133,173,159,149,152,184,	0,261,922,1204,1422,1812,2137,2703,3392,
#Partially deleted in new
chr19	40818413	40826471	chr19:40818413-40826471	7	-	40818413	40818413	16724991	3	486,142,376,	0,6706,7682,
#Partially deleted in new
chr19	40818720	40826772	chr19:40818720-40826772	5	-	40818720	40818720	16724991	6	183,147,201,153,201,171,	0,2761,3491,6391,7366,7881,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	40831220	40837210	chr19:40831220-40837210	3	-	40831220	40831220	8553170	2	357,125,	0,5865,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	40840158	40842039	chr19:40840158-40842039	3	+	40840158	40840158	8553170	1	1881,	0,
#Partially deleted in new
chr19	40843537	40850447	chr19:40843537-40850447	3	-	40843795	40850426	789624	9	440,142,188,142,177,161,150,163,201,	0,1093,1756,2418,3337,4681,5076,6280,6709,
#Partially deleted in new
chr19	40843540	40844852	chr19:40843540-40844852	0	-	40843540	40843540	8553170	2	437,222,	0,1090,
#Partially deleted in new
chr19	40844921	40850440	chr19:40844921-40850440	0	-	40844921	40844921	8553170	6	560,142,177,161,150,194,	0,1034,1953,3297,3692,5325,
#Partially deleted in new
chr19	40846028	40850447	chr19:40846028-40850447	0	-	40849972	40850426	789624	6	69,177,161,150,163,211,	0,846,2190,2585,3789,4208,
#Partially deleted in new
chr19	40875438	40882752	chr19:40875438-40882752	1	-	40875692	40882210	789624	8	436,142,188,142,177,161,150,732,	0,1088,1751,2413,3321,4645,5040,6582,
#Partially deleted in new
chr19	40875438	40882752	chr19:40875438-40882752	3	-	40875692	40882210	789624	9	436,142,188,142,177,161,150,163,722,	0,1088,1751,2413,3321,4645,5040,6150,6592,
#Deleted in new
chr19	40875797	40876747	chr19:40875797-40876747	0	-	40875797	40875797	8553170	3	77,98,221,	0,549,729,
#Partially deleted in new
chr19	40877074	40880090	chr19:40877074-40880090	0	-	40877074	40877074	8553170	4	303,142,177,7,	0,777,1685,3009,
#Deleted in new
chr19	40878876	40882231	chr19:40878876-40882231	0	-	40880565	40882210	789624	4	60,161,150,201,	0,1207,1602,3154,
#Partially deleted in new
chr19	40890825	40900508	chr19:40890825-40900508	7	+	40890825	40890825	16724991	5	1327,319,188,142,535,	0,2848,7312,7611,9148,
#Partially deleted in new
chr19	40891218	40900022	chr19:40891218-40900022	5	+	40891218	40891218	16724991	6	180,162,149,188,142,49,	0,772,2625,6919,7218,8755,
#Deleted in new
chr19	40908479	40910685	chr19:40908479-40910685	7	-	40908479	40908479	16724991	4	174,142,185,140,	0,751,1413,2066,
#Partially deleted in new
chr19	40924218	40939517	chr19:40924218-40939517	5	+	40924218	40924218	16724991	4	225,163,150,549,	0,11878,12173,14750,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	40924218	40950660	chr19:40924218-40950660	7	+	40924218	40924218	16724991	9	225,163,150,161,177,142,188,142,1608,	0,11878,12173,14750,17077,17846,20112,20492,24834,
#Partially deleted in new
chr19	40924218	40941868	chr19:40924218-40941868	5	+	40924218	40924218	16724991	5	225,163,150,161,573,	0,11878,12173,14750,17077,
#Partially deleted in new
chr19	40924272	40949234	chr19:40924272-40949234	5	+	40924272	40924272	16724991	9	171,163,150,161,177,142,188,142,182,	0,11824,12119,14696,17023,17792,20058,20438,24780,
#Partially deleted in new
chr19	40941422	40944988	chr19:40941422-40944988	4	+	40941422	40941422	16724991	4	50,142,188,278,	0,642,2908,3288,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	40944142	40949345	chr19:40944142-40949345	4	+	40944142	40944142	16724991	3	376,142,293,	0,568,4910,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	40946346	40947450	chr19:40946346-40947450	3	+	40946346	40946346	8553170	2	199,350,	0,754,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	40991249	41018398	chr19:40991249-41018398	3	+	40991305	41016827	0	9	227,163,150,161,177,142,188,142,1753,	0,12751,13047,15655,17969,18744,21048,21424,25396,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	40991283	41018392	chr19:40991283-41018392	1	+	40991305	41016827	0	9	193,163,150,161,177,142,188,142,1747,	0,12717,13013,15621,17935,18710,21014,21390,25362,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	40991403	41017016	chr19:40991403-41017016	0	+	40991403	41007514	789624	10	73,163,150,161,122,177,142,188,58,371,	0,12597,12893,15501,16075,17815,18590,20894,21569,25242,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	41003945	41017373	chr19:41003945-41017373	1	+	41004057	41016827	789624	5	218,150,188,142,728,	0,351,8352,8728,12700,
#Partially deleted in new
chr19	41004378	41007175	chr19:41004378-41007175	0	+	41004378	41004378	8553170	2	68,271,	0,2526,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	41009676	41017847	chr19:41009676-41017847	0	+	41009676	41009676	8553170	3	459,188,1202,	0,2621,6969,
#Partially deleted in new
chr19	41024267	41027720	chr19:41024267-41027720	7	-	41024267	41024267	16724991	5	169,169,139,160,178,	0,1332,1749,2832,3275,
#Partially deleted in new
chr19	41050448	41062444	chr19:41050448-41062444	7	-	41050448	41050448	16724991	9	182,142,188,142,177,161,150,163,180,	0,1575,1828,4753,6241,6997,8840,11061,11816,
#Deleted in new
chr19	41073803	41074107	chr19:41073803-41074107	7	-	41073803	41073803	16724991	1	304,	0,
#Partially deleted in new
chr19	41088471	41096195	chr19:41088471-41096195	3	+	41088471	41095941	0	9	180,163,150,161,177,142,188,142,436,	0,457,1575,1932,3260,5158,5773,6487,7288,
#Partially deleted in new
chr19	41114431	41128254	chr19:41114431-41128254	3	+	41116188	41128082	789624	10	61,182,163,150,161,177,142,188,142,354,	0,1746,2023,5915,7026,7525,8390,10287,11061,13469,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	41114431	41123350	chr19:41114431-41123350	0	+	41114431	41114431	8553170	4	61,163,177,529,	0,2023,7525,8390,
#Partially deleted in new
chr19	41114431	41125817	chr19:41114431-41125817	0	+	41114431	41114431	8553170	8	61,185,163,150,161,177,84,1099,	0,1743,2023,5915,7026,7525,8390,10287,
#Partially deleted in new
chr19	41114431	41128254	chr19:41114431-41128254	0	+	41116188	41124775	789624	10	61,182,163,150,161,177,84,188,142,354,	0,1746,2023,5915,7026,7525,8390,10287,11061,13469,
#Deleted in new
chr19	41124717	41125819	chr19:41124717-41125819	0	+	41124717	41125819	789624	2	189,327,	0,775,
#Partially deleted in new
chr19	41124854	41128366	chr19:41124854-41128366	0	+	41124854	41125788	789624	4	52,142,50,466,	0,638,884,3046,
#Partially deleted in new
chr19	41134721	41137308	chr19:41134721-41137308	7	+	41134721	41134721	16724991	7	133,154,136,43,133,97,121,	0,708,1293,1656,1965,2277,2466,
#Partially deleted in new
chr19	41169860	41170166	chr19:41169860-41170166	7	+	41169860	41169860	16724991	1	306,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	41190926	41191229	chr19:41190926-41191229	3	-	41190926	41190926	8553170	1	303,	0,
#Partially deleted in new
chr19	41193048	41207539	chr19:41193048-41207539	3	+	41193264	41206488	789624	9	393,166,150,161,180,142,188,142,1260,	0,1495,4730,5413,5660,8182,10401,12909,13231,
#Partially deleted in new
chr19	41193209	41205975	chr19:41193209-41205975	0	+	41193264	41205975	789624	4	232,142,188,18,	0,8021,10240,12748,
#Partially deleted in new
chr19	41193238	41206917	chr19:41193238-41206917	0	+	41193264	41203462	789624	6	203,166,142,188,142,638,	0,1305,7992,10211,12719,13041,
#Partially deleted in new
chr19	41193246	41201299	chr19:41193246-41201299	0	+	41193264	41201299	789624	4	195,166,150,69,	0,1297,4532,7984,
#Partially deleted in new
chr19	41193721	41206308	chr19:41193721-41206308	0	+	41194681	41203462	789624	6	92,166,142,188,142,29,	0,822,7509,9728,12236,12558,
#Partially deleted in new
chr19	41201292	41206567	chr19:41201292-41206567	0	+	41201292	41206099	789624	3	80,142,288,	0,4665,4987,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr19	41219202	41261766	chr19:41219202-41261766	3	+	41219392	41259904	0	20	275,223,101,177,81,116,211,140,151,27,133,92,96,78,93,122,110,160,137,2214,	0,1433,1943,2677,11764,11980,18741,19267,19961,20491,23680,24413,29311,29540,33148,33643,34396,37249,38290,40350,
#Partially deleted in new
chr19	41219234	41260294	chr19:41219234-41260294	1	+	41219392	41259904	0	19	243,223,101,177,81,116,211,140,151,133,92,96,78,93,122,110,160,137,742,	0,1401,1911,2645,11732,11948,18709,19235,19929,23648,24381,29279,29508,33116,33611,34364,37217,38258,40318,
#Partially deleted in new
chr19	41219378	41243864	chr19:41219378-41243864	0	+	41219378	41219378	8553170	12	99,223,101,177,81,116,211,140,151,27,133,249,	0,1257,1767,2501,11588,11804,18565,19091,19785,20315,23504,24237,
#Deleted in new
chr19	41220399	41221996	chr19:41220399-41221996	0	+	41220399	41220399	8553170	4	102,223,101,117,	0,236,746,1480,
#Deleted in new
chr19	41221425	41222051	chr19:41221425-41222051	3	-	41221425	41221425	8553170	2	219,67,	0,559,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr19	41226754	41260204	chr19:41226754-41260204	1	+	41237964	41259904	789624	17	158,81,116,211,140,151,27,133,92,96,78,93,122,110,160,137,652,	0,4212,4428,11189,11715,12409,12939,16128,16861,21759,21988,25596,26091,26844,29697,30738,32798,
#Partially deleted in new
chr19	41262495	41307598	chr19:41262495-41307598	1	+	41268227	41306565	789624	15	87,123,154,74,140,100,113,267,123,129,169,285,290,222,1150,	0,5727,9586,11486,13663,16581,18667,29749,31842,32062,39040,40169,41476,43150,43953,
#Partially deleted in new
chr19	41262518	41307019	chr19:41262518-41307019	1	+	41268227	41306565	789624	15	64,123,154,74,140,100,113,267,123,129,169,285,290,192,571,	0,5704,9563,11463,13640,16558,18644,29726,31819,32039,39017,40146,41453,43157,43930,
#Partially deleted in new
chr19	41262529	41281214	chr19:41262529-41281214	0	+	41272083	41281214	789624	6	53,154,74,140,100,52,	0,9552,11452,13629,16547,18633,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	41262661	41294581	chr19:41262661-41294581	0	+	41268227	41294581	789624	10	355,123,154,74,140,100,113,267,123,24,	0,5561,9420,11320,13497,16415,18501,29583,31676,31896,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	41262670	41276168	chr19:41262670-41276168	0	+	41268227	41276168	789624	5	311,123,154,74,10,	0,5552,9411,11311,13488,
#Partially deleted in new
chr19	41264330	41307376	chr19:41264330-41307376	3	+	41264503	41306565	789624	15	468,123,154,74,140,100,113,267,123,129,169,285,290,192,928,	0,3892,7751,9651,11828,14746,16832,27914,30007,30227,37205,38334,39641,41345,42118,
#Partially deleted in new
chr19	41264371	41307038	chr19:41264371-41307038	1	+	41264503	41306565	789624	14	234,64,123,154,74,140,267,123,129,169,285,290,222,590,	0,363,3851,7710,9610,11787,27873,29966,30186,37164,38293,39600,41274,42077,
#Partially deleted in new
chr19	41264410	41307050	chr19:41264410-41307050	0	+	41264503	41272087	789624	15	282,123,154,74,140,100,113,267,123,129,169,285,290,192,602,	0,3812,7671,9571,11748,14666,16752,27834,29927,30147,37125,38254,39561,41265,42038,
#Partially deleted in new
chr19	41264450	41307029	chr19:41264450-41307029	1	+	41264503	41306565	789624	15	348,123,154,74,140,100,113,267,123,129,169,285,290,36,581,	0,3772,7631,9531,11708,14626,16712,27794,29887,30107,37085,38214,39521,41381,41998,
#Partially deleted in new
chr19	41264457	41307038	chr19:41264457-41307038	1	+	41264503	41305854	789624	3	236,192,590,	0,41218,41991,
#Partially deleted in new
chr19	41264846	41276286	chr19:41264846-41276286	0	+	41268227	41276286	789624	5	275,123,154,74,128,	0,3376,7235,9135,11312,
#Partially deleted in new
chr19	41265078	41306925	chr19:41265078-41306925	1	+	41268227	41306565	789624	15	89,123,154,74,140,100,113,267,123,129,169,285,290,192,477,	0,3144,7003,8903,11080,13998,16084,27166,29259,29479,36457,37586,38893,40597,41370,
#Partially deleted in new
chr19	41265100	41281128	chr19:41265100-41281128	0	+	41265100	41265100	8553170	7	21,123,154,74,140,100,204,	0,3122,6981,8881,11058,13976,15824,
#Partially deleted in new
chr19	41265121	41307019	chr19:41265121-41307019	1	+	41265315	41306565	789624	15	222,123,154,74,140,100,113,267,123,129,169,285,290,192,571,	0,3101,6960,8860,11037,13955,16041,27123,29216,29436,36414,37543,38850,40554,41327,
#Partially deleted in new
chr19	41268077	41272206	chr19:41268077-41272206	0	+	41268227	41272206	789624	2	268,125,	0,4004,
#Partially deleted in new
chr19	41268298	41272370	chr19:41268298-41272370	0	+	41268298	41268298	8553170	2	47,289,	0,3783,
#Partially deleted in new
chr19	41272117	41307087	chr19:41272117-41307087	0	+	41272117	41306565	789624	12	118,74,140,100,113,267,123,129,169,285,290,639,	0,1864,4041,6959,9045,20127,22220,22440,29418,30547,31854,34331,
#Partially deleted in new
chr19	41274032	41294388	chr19:41274032-41294388	0	+	41274032	41292252	789624	5	23,140,100,267,51,	0,2126,5044,18212,20305,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	41276269	41278443	chr19:41276269-41278443	0	+	41276269	41276349	789624	2	539,105,	0,2069,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	41286423	41286693	chr19:41286423-41286693	3	-	41286423	41286423	8553170	1	270,	0,
#Deleted in new
chr19	41298489	41301646	chr19:41298489-41301646	0	+	41298489	41298489	8553170	2	420,111,	0,3046,
#Partially deleted in new
chr19	41301586	41342030	chr19:41301586-41342030	0	-	41302660	41342030	789624	4	160,97,154,148,	0,1037,30541,40296,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	41302392	41307038	chr19:41302392-41307038	0	+	41302392	41302392	8553170	4	557,290,222,590,	0,1579,3253,4056,
#Partially deleted in new
chr19	41310188	41324883	chr19:41310188-41324883	3	+	41310310	41322715	789624	5	168,456,279,130,2289,	0,6195,9385,10152,12406,
#Partially deleted in new
chr19	41310800	41316581	chr19:41310800-41316581	0	+	41316532	41316581	789624	2	215,198,	0,5583,
#Deleted in new
chr19	41319732	41320754	chr19:41319732-41320754	0	+	41319732	41320684	789624	2	120,414,	0,608,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	41330322	41353911	chr19:41330322-41353911	3	-	41331051	41353044	789624	7	888,154,148,78,118,161,1222,	0,1805,11560,11847,14424,17972,22367,
#Partially deleted in new
chr19	41332054	41344840	chr19:41332054-41344840	0	-	41332054	41332054	8553170	3	227,78,94,	0,10115,12692,
#Partially deleted in new
chr19	41342020	41348341	chr19:41342020-41348341	0	-	41342020	41342020	8553170	3	227,118,47,	0,2726,6274,
#Partially deleted in new
chr19	41350852	41410853	chr19:41350852-41410853	0	+	41350852	41350852	8553170	2	350,217,	0,59784,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	41350910	41384083	chr19:41350910-41384083	1	+	41378309	41382960	789624	3	292,239,1312,	0,27370,31861,
#Partially deleted in new
chr19	41354168	41384083	chr19:41354168-41384083	1	+	41354173	41383904	789624	4	147,239,150,221,	0,24112,28603,29694,
#Partially deleted in new
chr19	41354420	41364173	chr19:41354420-41364173	3	-	41354699	41363519	789624	4	593,126,92,216,	0,3476,9011,9537,
#Partially deleted in new
chr19	41361009	41364092	chr19:41361009-41364092	0	-	41361009	41361009	8553170	3	194,92,135,	0,2422,2948,
#Partially deleted in new
chr19	41364055	41384083	chr19:41364055-41384083	1	+	41378309	41383904	789624	4	40,239,150,221,	0,14225,18716,19807,
#Partially deleted in new
chr19	41373970	41374419	chr19:41373970-41374419	3	+	41373970	41373970	8553170	1	449,	0,
#Partially deleted in new
chr19	41376223	41384083	chr19:41376223-41384083	3	+	41378309	41383873	789624	4	631,239,150,369,	0,2057,6548,7491,
#Partially deleted in new
chr19	41376577	41384083	chr19:41376577-41384083	1	+	41378309	41383897	789624	4	277,239,150,198,	0,1703,6194,7308,
#Partially deleted in new
chr19	41376732	41384083	chr19:41376732-41384083	1	+	41378309	41383897	789624	4	122,239,150,210,	0,1548,6039,7141,
#Partially deleted in new
chr19	41376739	41384083	chr19:41376739-41384083	1	+	41378309	41383904	789624	4	115,239,150,221,	0,1541,6032,7123,
#Partially deleted in new
chr19	41376756	41425001	chr19:41376756-41425001	3	+	41378309	41424608	789624	10	98,239,180,87,109,162,207,142,172,564,	0,1524,33880,34166,37292,42378,45407,45872,46241,47681,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	41376772	41384060	chr19:41376772-41384060	1	+	41378309	41382960	789624	3	82,239,1289,	0,1508,5999,
#Partially deleted in new
chr19	41376968	41382904	chr19:41376968-41382904	0	+	41378309	41382904	789624	3	78,239,133,	0,1312,5803,
#Partially deleted in new
chr19	41377266	41383722	chr19:41377266-41383722	0	+	41378309	41383722	789624	4	57,239,150,8,	0,1014,5505,6448,
#Partially deleted in new
chr19	41377291	41384083	chr19:41377291-41384083	1	+	41378309	41383620	789624	4	32,239,150,523,	0,989,5480,6269,
#Partially deleted in new
chr19	41378351	41384083	chr19:41378351-41384083	0	+	41378351	41383897	789624	2	168,210,	0,5522,
#Partially deleted in new
chr19	41378467	41384077	chr19:41378467-41384077	0	+	41378467	41383620	789624	4	52,150,72,215,	0,4304,5093,5395,
#Partially deleted in new
chr19	41382800	41384080	chr19:41382800-41384080	0	+	41382800	41383620	789624	3	121,72,207,	0,760,1073,
#Partially deleted in new
chr19	41386373	41397479	chr19:41386373-41397479	3	-	41386632	41397328	0	6	352,90,141,122,114,299,	0,1140,3391,5467,6493,10807,
#Partially deleted in new
chr19	41386375	41397256	chr19:41386375-41397256	0	-	41386540	41397256	789624	3	184,94,76,	0,6511,10805,
#Partially deleted in new
chr19	41386414	41397342	chr19:41386414-41397342	1	-	41386632	41397328	789624	5	311,90,141,122,162,	0,1099,3350,5426,10766,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	41391536	41397356	chr19:41391536-41397356	0	-	41391536	41391536	8553170	3	426,114,176,	0,1330,5644,
#Partially deleted in new
chr19	41391889	41397331	chr19:41391889-41397331	0	-	41391889	41397328	789624	4	73,66,114,151,	0,191,977,5291,
#Partially deleted in new
chr19	41397459	41425005	chr19:41397459-41425005	3	+	41397827	41424608	0	9	476,180,87,109,162,207,142,172,568,	0,13177,13463,16589,21675,24704,25169,25538,26978,
#Partially deleted in new
chr19	41397807	41422207	chr19:41397807-41422207	0	+	41397807	41397807	8553170	5	128,373,109,162,44,	0,12829,16241,21327,24356,
#Partially deleted in new
chr19	41397819	41423075	chr19:41397819-41423075	0	+	41397827	41423075	789624	7	116,180,109,162,207,142,78,	0,12817,16229,21315,24344,24809,25178,
#Partially deleted in new
chr19	41397822	41425001	chr19:41397822-41425001	1	+	41397827	41424608	0	9	62,165,87,109,162,207,142,247,564,	0,12829,13100,16226,21312,24341,24806,25100,26615,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	41399371	41400365	chr19:41399371-41400365	3	+	41399371	41399371	8553170	2	509,31,	0,963,
#Partially deleted in new
chr19	41415381	41422761	chr19:41415381-41422761	0	+	41415381	41415381	8553170	4	113,162,207,133,	0,3753,6782,7247,
#Partially deleted in new
chr19	41419022	41422734	chr19:41419022-41422734	0	+	41419022	41419022	8553170	3	274,207,106,	0,3141,3606,
#Partially deleted in new
chr19	41423108	41425002	chr19:41423108-41425002	0	+	41423108	41424723	789624	2	61,501,	0,1393,
#Deleted in new
chr19	41425358	41428730	chr19:41425358-41428730	3	-	41425584	41426778	789624	3	1452,287,135,	0,1925,3237,
#Deleted in new
chr19	41425358	41426237	chr19:41425358-41426237	3	+	41425358	41425358	8553170	2	192,152,	0,727,
#Deleted in new
chr19	41425410	41427558	chr19:41425410-41427558	0	-	41425410	41425410	8553170	2	80,36,	0,2112,
#Deleted in new
chr19	41426055	41427362	chr19:41426055-41427362	0	-	41426055	41426055	8553170	2	384,79,	0,1228,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	41431317	41439910	chr19:41431317-41439910	1	-	41432283	41439899	789624	4	1091,137,197,29,	0,2219,6900,8564,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	41431318	41439905	chr19:41431318-41439905	3	-	41432230	41439899	789624	6	1090,163,137,81,197,24,	0,1953,2218,5073,6899,8563,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	41431318	41439537	chr19:41431318-41439537	0	-	41431318	41431318	8553170	3	2116,137,64,	0,2218,8155,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	41431338	41439936	chr19:41431338-41439936	1	-	41432230	41439899	789624	5	1070,163,137,197,55,	0,1933,2198,6879,8543,
#Partially deleted in new
chr19	41431748	41436439	chr19:41431748-41436439	0	-	41431879	41436439	789624	5	140,94,163,137,48,	0,566,1523,1788,4643,
#Partially deleted in new
chr19	41431755	41439539	chr19:41431755-41439539	1	-	41432283	41439509	789624	5	653,137,81,197,66,	0,1781,4636,6462,7718,
#Partially deleted in new
chr19	41431871	41439908	chr19:41431871-41439908	1	-	41432283	41439899	789624	5	537,137,81,197,27,	0,1665,4520,6346,8010,
#Partially deleted in new
chr19	41431987	41439539	chr19:41431987-41439539	1	-	41432230	41439509	789624	6	421,163,137,81,197,66,	0,1284,1549,4404,6230,7486,
#Partially deleted in new
chr19	41432845	41439576	chr19:41432845-41439576	1	-	41433267	41439509	789624	4	589,137,197,103,	0,691,5372,6628,
#Partially deleted in new
chr19	41432853	41439537	chr19:41432853-41439537	0	-	41433640	41439509	789624	3	581,137,64,	0,683,6620,
#Partially deleted in new
chr19	41432928	41439905	chr19:41432928-41439905	1	-	41433048	41439899	789624	4	134,137,197,24,	0,608,5289,6953,
#Partially deleted in new
chr19	41433223	41439908	chr19:41433223-41439908	1	-	41433267	41439899	789624	4	211,137,197,27,	0,313,4994,6658,
#Partially deleted in new
chr19	41433283	41439910	chr19:41433283-41439910	0	-	41433283	41439899	789624	5	151,137,44,180,29,	0,253,3145,4951,6598,
#Partially deleted in new
chr19	41433439	41439896	chr19:41433439-41439896	0	-	41433439	41433439	8553170	4	234,81,197,15,	0,2952,4778,6442,
#Partially deleted in new
chr19	41433626	41440717	chr19:41433626-41440717	0	-	41433626	41438393	789624	4	47,81,197,237,	0,2765,4591,6854,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	41438965	41440692	chr19:41438965-41440692	0	-	41438965	41438965	8553170	1	1727,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	41442101	41442392	chr19:41442101-41442392	3	-	41442101	41442101	8553170	1	291,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	41443157	41444765	chr19:41443157-41444765	3	+	41443169	41444224	789624	2	186,760,	0,848,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	41454168	41500644	chr19:41454168-41500644	3	-	41454168	41454168	789624	4	2319,204,888,61,	0,24912,40371,46415,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	41455316	41500644	chr19:41455316-41500644	0	-	41455316	41455316	8553170	2	1171,61,	0,45267,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	41455695	41500649	chr19:41455695-41500649	0	-	41455695	41455695	789624	3	792,204,66,	0,23385,44888,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	41455778	41500629	chr19:41455778-41500629	0	-	41455778	41455778	8553170	3	709,126,46,	0,39523,44805,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	41456028	41479143	chr19:41456028-41479143	0	-	41456028	41456028	8553170	3	459,74,63,	0,18437,23052,
#Partially deleted in new
chr19	41506151	41506898	chr19:41506151-41506898	7	+	41506151	41506151	16724991	1	747,	0,
#Partially deleted in new
chr19	41521042	41521989	chr19:41521042-41521989	7	-	41521042	41521042	16724991	2	745,149,	0,798,
#Partially deleted in new
chr19	41531205	41531877	chr19:41531205-41531877	1	+	41531205	41531205	8553170	2	128,452,	0,220,
#Partially deleted in new
chr19	41531286	41532174	chr19:41531286-41532174	3	+	41531286	41531286	8553170	2	289,305,	0,583,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	41535182	41536900	chr19:41535182-41536900	3	+	41535182	41535182	8553170	1	1718,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	41545191	41555251	chr19:41545191-41555251	3	+	41545191	41545191	8553170	7	5,33,315,76,41,149,42,	0,4328,5988,6561,8514,9759,10018,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	41549517	41586843	chr19:41549517-41586843	1	+	41579312	41585871	789624	8	35,375,360,359,97,53,32,380,	0,15164,27682,29752,34829,35925,36322,36946,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	41549517	41565608	chr19:41549517-41565608	0	+	41549517	41549517	8553170	3	35,375,41,	0,15164,16050,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	41549519	41555462	chr19:41549519-41555462	1	+	41549519	41549519	8553170	5	33,123,41,149,253,	0,1660,4186,5431,5690,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	41549519	41550705	chr19:41549519-41550705	1	+	41549519	41549519	8553170	2	33,568,	0,618,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	41551567	41552274	chr19:41551567-41552274	3	-	41551567	41551567	8553170	1	707,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	41564681	41586810	chr19:41564681-41586810	0	+	41564681	41564681	8553170	6	375,360,276,94,53,376,	0,12518,14671,19668,20761,21753,
#Partially deleted in new
chr19	41576178	41586840	chr19:41576178-41586840	0	+	41576274	41579421	789624	7	160,360,359,94,53,32,377,	0,1021,3091,8171,9264,9661,10285,
#Partially deleted in new
chr19	41576234	41586844	chr19:41576234-41586844	1	+	41576274	41585871	789624	7	104,360,276,94,53,32,381,	0,965,3118,8115,9208,9605,10229,
#Partially deleted in new
chr19	41576248	41586563	chr19:41576248-41586563	3	+	41576274	41585871	789624	7	90,360,276,97,53,32,100,	0,951,3104,8098,9194,9591,10215,
#Partially deleted in new
chr19	41579520	41586844	chr19:41579520-41586844	0	+	41579520	41585871	789624	6	108,94,53,32,42,381,	0,4829,5922,6319,6633,6943,
#Partially deleted in new
chr19	41599734	41605221	chr19:41599734-41605221	7	+	41599734	41599734	16724991	3	63,316,259,	0,1477,5228,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	41602242	41605984	chr19:41602242-41605984	5	+	41602242	41602242	16724991	3	310,94,1144,	0,1921,2598,
#Deleted in new
chr19	41605340	41605671	chr19:41605340-41605671	7	-	41605340	41605340	16724991	2	172,130,	0,201,
#Partially deleted in new
chr19	41618970	41627074	chr19:41618970-41627074	3	-	41619329	41626963	789624	7	425,42,32,53,118,360,175,	0,699,1240,1604,2680,6630,7929,
#Partially deleted in new
chr19	41619544	41627074	chr19:41619544-41627074	1	-	41619567	41626963	789624	6	167,32,47,118,360,175,	0,666,1030,2106,6056,7355,
#Deleted in new
chr19	41625566	41627074	chr19:41625566-41627074	0	-	41625566	41625566	8553170	2	394,175,	0,1333,
#Deleted in new
chr19	41638568	41638899	chr19:41638568-41638899	7	-	41638568	41638568	16724991	1	331,	0,
#Partially deleted in new
chr19	41639658	41640602	chr19:41639658-41640602	7	-	41639658	41639658	16724991	2	201,54,	0,890,
#Deleted in new
chr19	41652675	41652963	chr19:41652675-41652963	7	+	41652675	41652675	16724991	1	288,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	41673306	41688367	chr19:41673306-41688367	3	-	41677411	41688165	789624	5	1453,128,279,363,266,	0,4069,10478,13552,14795,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	41674442	41688270	chr19:41674442-41688270	1	-	41677411	41688165	789624	5	297,128,279,363,169,	0,2933,9342,12416,13659,
#Partially deleted in new
chr19	41677408	41688167	chr19:41677408-41688167	1	-	41677411	41688165	789624	3	95,363,66,	0,9450,10693,
#Partially deleted in new
chr19	41684044	41706976	chr19:41684044-41706976	0	-	41684044	41684044	8553170	4	19,363,116,44,	0,2814,19754,22888,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	41708584	41729345	chr19:41708584-41729345	1	+	41708731	41727316	789624	10	211,360,279,255,276,255,279,255,119,162,	0,1095,6386,7065,8873,9543,11345,12337,18649,20599,
#Partially deleted in new
chr19	41708611	41761282	chr19:41708611-41761282	3	+	41708731	41761282	789624	3	184,360,34,	0,1068,52637,
#Deleted in new
chr19	41708620	41710083	chr19:41708620-41710083	0	+	41708620	41708620	8553170	2	175,404,	0,1059,
#Partially deleted in new
chr19	41708625	41715870	chr19:41708625-41715870	0	+	41708625	41708625	8553170	3	170,360,900,	0,1054,6345,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	41708648	41729335	chr19:41708648-41729335	1	+	41708731	41727316	789624	10	147,360,279,255,279,255,279,255,119,126,	0,1031,6322,7001,8806,9479,11281,12273,18585,20561,
#Partially deleted in new
chr19	41708648	41727352	chr19:41708648-41727352	1	+	41708731	41727316	789624	7	147,360,279,255,279,255,119,	0,1031,8806,9479,11281,12273,18585,
#Partially deleted in new
chr19	41708648	41727352	chr19:41708648-41727352	1	+	41708731	41727316	789624	6	147,360,188,91,255,119,	0,1031,6322,11469,12273,18585,
#Partially deleted in new
chr19	41708648	41727352	chr19:41708648-41727352	1	+	41708731	41727316	789624	9	147,360,279,255,279,255,279,255,119,	0,1031,6322,7001,8806,9479,11281,12273,18585,
#Partially deleted in new
chr19	41708656	41756737	chr19:41708656-41756737	0	+	41708731	41756737	789624	2	139,138,	0,47943,
#Partially deleted in new
chr19	41709715	41720028	chr19:41709715-41720028	0	+	41709715	41720028	789624	2	324,99,	0,10214,
#Partially deleted in new
chr19	41709913	41717630	chr19:41709913-41717630	0	+	41709913	41717630	789624	3	126,279,176,	0,5057,7541,
#Partially deleted in new
chr19	41750976	41756635	chr19:41750976-41756635	0	+	41755638	41756635	789624	4	246,106,183,36,	0,666,4543,5623,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	41755420	41772208	chr19:41755420-41772208	3	+	41755638	41766259	789624	6	282,360,279,255,117,1407,	0,1179,5828,6548,10762,15381,
#Partially deleted in new
chr19	41757897	41786893	chr19:41757897-41786893	3	-	41757897	41757897	8553170	2	184,383,	0,28613,
#Partially deleted in new
chr19	41796436	41811553	chr19:41796436-41811553	3	+	41796677	41811237	0	7	305,360,118,53,32,66,382,	0,1152,12376,13528,13886,14395,14735,
#Partially deleted in new
chr19	41796589	41809621	chr19:41796589-41809621	0	+	41796589	41796589	8553170	4	152,360,134,809,	0,999,10521,12223,
#Partially deleted in new
chr19	41796589	41811553	chr19:41796589-41811553	1	+	41796677	41810896	0	6	152,360,118,32,66,382,	0,999,12223,13733,14242,14582,
#Deleted in new
chr19	41796601	41798036	chr19:41796601-41798036	0	+	41796601	41796601	8553170	2	140,448,	0,987,
#Partially deleted in new
chr19	41796616	41811553	chr19:41796616-41811553	0	+	41796677	41807220	0	8	125,360,507,115,53,32,66,382,	0,972,10494,12199,13348,13706,14215,14555,
#Partially deleted in new
chr19	41796623	41811551	chr19:41796623-41811551	1	+	41796677	41810896	0	6	118,360,118,32,66,328,	0,965,12189,13699,14208,14600,
#Deleted in new
chr19	41797152	41797941	chr19:41797152-41797941	0	+	41797644	41797941	789624	2	121,353,	0,436,
#Deleted in new
chr19	41808812	41810031	chr19:41808812-41810031	0	+	41808812	41808812	8553170	2	118,732,	0,487,
#Partially deleted in new
chr19	41829691	41830938	chr19:41829691-41830938	7	+	41829691	41829691	16724991	2	326,621,	0,626,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	41833685	41835950	chr19:41833685-41835950	3	-	41833685	41833685	8553170	1	2265,	0,
#Partially deleted in new
chr19	41837073	41843727	chr19:41837073-41843727	1	-	41837142	41839285	789624	5	272,327,226,76,150,	0,861,2106,2434,6504,
#Partially deleted in new
chr19	41837073	41844697	chr19:41837073-41844697	1	-	41837142	41839285	789624	6	272,327,226,76,150,25,	0,861,2106,2434,6504,7599,
#Partially deleted in new
chr19	41837073	41844673	chr19:41837073-41844673	3	-	41837142	41839285	789624	5	272,327,144,187,1096,	0,861,1807,2145,6504,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	41844742	41852327	chr19:41844742-41852327	0	+	41847428	41849136	789624	7	261,228,146,77,221,127,2016,	0,2682,2993,3709,4012,4387,5569,
#Partially deleted in new
chr19	41844945	41848844	chr19:41844945-41848844	0	+	41847428	41848844	789624	5	58,228,146,77,50,	0,2479,2790,3506,3849,
#Partially deleted in new
chr19	41845019	41852028	chr19:41845019-41852028	1	+	41847428	41851696	789624	8	82,228,146,77,181,127,389,445,	0,2405,2716,3432,3775,4110,5292,6564,
#Partially deleted in new
chr19	41845050	41848819	chr19:41845050-41848819	0	+	41845050	41845050	8553170	5	51,228,146,77,65,	0,2374,2685,3401,3704,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	41845054	41852333	chr19:41845054-41852333	3	+	41847428	41851696	789624	9	47,228,146,77,181,127,61,175,750,	0,2370,2681,3397,3740,4075,5257,5471,6529,
#Partially deleted in new
chr19	41845089	41848485	chr19:41845089-41848485	0	+	41847428	41848485	789624	5	92,56,228,146,34,	0,256,2335,2646,3362,
#Partially deleted in new
chr19	41845324	41848832	chr19:41845324-41848832	0	+	41847428	41848832	789624	5	77,228,146,77,38,	0,2100,2411,3127,3470,
#Deleted in new
chr19	41850243	41851648	chr19:41850243-41851648	0	+	41850243	41850243	8553170	2	457,65,	0,1340,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	41859917	41872926	chr19:41859917-41872926	3	+	41860774	41871377	0	6	372,71,101,184,55,1576,	0,857,1194,9113,9781,11433,
#Deleted in new
chr19	41860254	41861606	chr19:41860254-41861606	0	+	41860254	41860254	8553170	3	35,71,495,	0,520,857,
#Partially deleted in new
chr19	41860254	41871416	chr19:41860254-41871416	1	+	41860774	41871377	0	6	191,71,101,184,55,66,	0,520,857,8776,9444,11096,
#Partially deleted in new
chr19	41860254	41869084	chr19:41860254-41869084	0	+	41860774	41869084	789624	5	35,71,101,81,54,	0,520,857,1225,8776,
#Partially deleted in new
chr19	41860256	41871416	chr19:41860256-41871416	1	+	41869080	41871377	789624	6	33,61,101,184,55,66,	0,528,855,8774,9442,11094,
#Partially deleted in new
chr19	41860277	41869146	chr19:41860277-41869146	0	+	41860774	41869146	789624	4	12,71,114,116,	0,497,834,8753,
#Partially deleted in new
chr19	41860445	41871416	chr19:41860445-41871416	1	+	41860774	41871377	0	6	49,71,101,184,55,66,	0,329,666,8585,9253,10905,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	41860777	41869192	chr19:41860777-41869192	0	+	41860777	41863917	789624	5	68,101,115,726,162,	0,334,3093,3396,8253,
#Deleted in new
chr19	41869626	41869698	chr19:41869626-41869698	3	+	41869626	41869626	5263520	1	72,	0,
#Partially deleted in new
chr19	41877119	41881372	chr19:41877119-41881372	3	+	41877304	41880980	0	5	264,300,119,69,506,	0,1870,2415,3550,3747,
#Partially deleted in new
chr19	41877279	41880702	chr19:41877279-41880702	0	+	41877304	41880702	789624	3	104,664,33,	0,1710,3390,
#Partially deleted in new
chr19	41877304	41880980	chr19:41877304-41880980	1	+	41877304	41880980	0	5	79,186,119,69,114,	0,1685,2230,3365,3562,
#Partially deleted in new
chr19	41883160	41907443	chr19:41883160-41907443	1	+	41888082	41906786	0	29	129,43,87,114,99,43,247,30,100,97,36,138,106,146,147,83,126,115,101,78,76,168,88,87,68,87,164,101,339,	0,4903,5031,5591,8864,9170,9442,10113,11046,11290,11465,12188,13216,15281,18726,19113,19372,19623,20146,20546,20874,21055,21788,22014,22599,22778,23296,23542,23944,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	41883172	41890776	chr19:41883172-41890776	0	+	41883172	41883172	8553170	4	117,43,87,2025,	0,4891,5019,5579,
#Partially deleted in new
chr19	41883182	41907454	chr19:41883182-41907454	0	+	41883182	41883182	8553170	28	107,43,87,114,349,247,30,100,97,36,138,106,146,147,83,126,115,101,78,76,168,88,87,68,87,164,101,350,	0,4881,5009,5569,8842,9420,10091,11024,11268,11443,12166,13194,15259,18704,19091,19350,19601,20124,20524,20852,21033,21766,21992,22577,22756,23274,23520,23922,
#Partially deleted in new
chr19	41883183	41907448	chr19:41883183-41907448	1	+	41888082	41906786	789624	30	106,43,87,114,99,43,247,30,100,97,36,138,106,168,146,147,83,126,115,101,78,76,168,88,87,68,87,164,101,344,	0,4880,5008,5568,8841,9147,9419,10090,11023,11267,11442,12165,13193,14762,15258,18703,19090,19349,19600,20123,20523,20851,21032,21765,21991,22576,22755,23273,23519,23921,
#Partially deleted in new
chr19	41883223	41892528	chr19:41883223-41892528	0	+	41883223	41883223	8553170	2	66,504,	0,8801,
#Partially deleted in new
chr19	41883224	41907454	chr19:41883224-41907454	1	+	41888082	41906786	0	28	65,43,87,114,43,247,30,100,97,36,138,106,146,147,83,126,115,101,78,76,168,88,87,68,87,164,101,350,	0,4839,4967,5527,9106,9378,10049,10982,11226,11401,12124,13152,15217,18662,19049,19308,19559,20082,20482,20810,20991,21724,21950,22535,22714,23232,23478,23880,
#Partially deleted in new
chr19	41884369	41907454	chr19:41884369-41907454	1	+	41884467	41907413	0	27	124,43,87,114,43,247,30,100,97,36,138,106,146,147,83,126,115,101,78,76,168,88,87,68,87,101,350,	0,3694,3822,4382,7961,8233,8904,9837,10081,10256,10979,12007,14072,17517,17904,18163,18414,18937,19337,19665,19846,20579,20805,21390,21569,22333,22735,
#Partially deleted in new
chr19	41884447	41907454	chr19:41884447-41907454	3	+	41884467	41906786	0	29	46,43,87,114,99,43,247,30,100,97,36,138,106,146,147,83,126,115,101,78,76,168,88,87,68,87,164,101,350,	0,3616,3744,4304,7577,7883,8155,8826,9759,10003,10178,10901,11929,13994,17439,17826,18085,18336,18859,19259,19587,19768,20501,20727,21312,21491,22009,22255,22657,
#Deleted in new
chr19	41892633	41895373	chr19:41892633-41895373	0	+	41892633	41893238	789624	6	216,114,100,97,36,25,	0,556,1573,1817,1992,2715,
#Partially deleted in new
chr19	41894291	41902030	chr19:41894291-41902030	0	+	41894291	41902030	789624	8	15,97,138,106,12,168,146,144,	0,159,1057,2085,3023,3654,4150,7595,
#Deleted in new
chr19	41894486	41896878	chr19:41894486-41896878	0	+	41894486	41894486	8553170	4	61,36,138,502,	0,139,862,1890,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr19	41895378	41930150	chr19:41895378-41930150	0	+	41895378	41928954	789624	21	108,106,12,168,146,147,83,126,115,101,78,76,168,88,87,68,87,101,142,133,496,	0,998,1936,2567,3063,6508,6895,7154,7405,7928,8328,8656,8837,9570,9796,10381,10560,11324,27713,33475,34276,
#Partially deleted in new
chr19	41897674	41907454	chr19:41897674-41907454	0	+	41897674	41897674	8553170	16	913,147,83,126,115,101,129,76,168,88,87,238,87,164,101,350,	0,4212,4599,4858,5109,5632,5981,6360,6541,7274,7500,7915,8264,8782,9028,9430,
#Partially deleted in new
chr19	41897810	41902897	chr19:41897810-41902897	0	+	41897810	41902897	789624	6	303,146,147,83,126,114,	0,631,4076,4463,4722,4973,
#Partially deleted in new
chr19	41902797	41906561	chr19:41902797-41906561	0	+	41902797	41906561	789624	9	101,101,78,76,168,88,68,87,105,	0,509,909,1237,1418,2151,2962,3141,3659,
#Deleted in new
chr19	41904215	41906043	chr19:41904215-41906043	0	+	41904215	41905212	789624	4	168,87,68,105,	0,959,1544,1723,
#Deleted in new
chr19	41905512	41905982	chr19:41905512-41905982	0	+	41905512	41905512	8553170	2	315,44,	0,426,
#Deleted in new
chr19	41905799	41906335	chr19:41905799-41906335	0	+	41905799	41905799	8553170	2	28,397,	0,139,
#Deleted in new
chr19	41906575	41907452	chr19:41906575-41907452	0	+	41906575	41906575	8553170	2	228,348,	0,529,
#Partially deleted in new
chr19	41907704	41928516	chr19:41907704-41928516	3	-	41908227	41912919	789624	6	972,118,196,235,80,477,	0,1355,1571,2158,5148,20335,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	41923093	41930127	chr19:41923093-41930127	0	+	41923093	41929743	789624	3	140,156,473,	0,5737,6561,
#Deleted in new
chr19	41928589	41929846	chr19:41928589-41929846	0	+	41928589	41928589	8553170	2	133,192,	0,1065,
#Deleted in new
chr19	41928819	41930150	chr19:41928819-41930150	0	+	41928819	41928819	789624	2	167,496,	0,835,
#Partially deleted in new
chr19	41956680	41959390	chr19:41956680-41959390	3	-	41956845	41959292	789624	5	254,102,98,213,154,	0,337,1605,2055,2556,
#Deleted in new
chr19	41956680	41957342	chr19:41956680-41957342	0	-	41956680	41956680	8553170	1	662,	0,
#Partially deleted in new
chr19	41956680	41959266	chr19:41956680-41959266	0	-	41956885	41959266	789624	5	210,102,98,213,30,	0,337,1605,2055,2556,
#Partially deleted in new
chr19	41956680	41959299	chr19:41956680-41959299	1	-	41956845	41959292	789624	4	254,98,213,63,	0,1605,2055,2556,
#Partially deleted in new
chr19	41956685	41958914	chr19:41956685-41958914	0	-	41956885	41958914	789624	3	249,102,179,	0,332,2050,
#Deleted in new
chr19	41956691	41957499	chr19:41956691-41957499	0	-	41956691	41956691	8553170	2	243,482,	0,326,
#Partially deleted in new
chr19	41956780	41959275	chr19:41956780-41959275	1	-	41956845	41958370	789624	5	154,102,98,213,161,	0,237,1505,1955,2334,
#Partially deleted in new
chr19	41956878	41994232	chr19:41956878-41994232	3	-	41958928	41994076	789624	25	56,98,213,92,102,131,146,124,155,169,151,137,176,193,135,110,199,269,118,135,114,204,60,87,162,	0,1407,1857,10370,10783,11906,12556,13306,13509,18750,19537,21057,21272,21727,24623,24843,25029,28039,28427,28985,29237,31057,31439,31597,37192,
#Partially deleted in new
chr19	41957033	41959310	chr19:41957033-41959310	0	-	41957033	41957033	8553170	3	86,98,575,	0,1252,1702,
#Deleted in new
chr19	41957858	41959269	chr19:41957858-41959269	0	-	41957858	41957858	8553170	3	525,213,33,	0,877,1378,
#Deleted in new
chr19	41958151	41959302	chr19:41958151-41959302	0	-	41958151	41958151	8553170	2	232,567,	0,584,
#Partially deleted in new
chr19	41966581	41994276	chr19:41966581-41994276	3	-	41966936	41994076	789624	23	384,92,102,131,146,124,155,169,151,137,176,193,135,110,199,269,118,135,114,204,60,87,206,	0,667,1080,2203,2853,3603,3806,9047,9834,11354,11569,12024,14920,15140,15326,18336,18724,19282,19534,21354,21736,21894,27489,
#Partially deleted in new
chr19	41966581	41994214	chr19:41966581-41994214	0	-	41966581	41994076	789624	22	759,102,131,146,124,155,169,151,137,176,193,135,110,199,269,118,135,114,204,60,87,144,	0,1080,2203,2853,3603,3806,9047,9834,11354,11569,12024,14920,15140,15326,18336,18724,19282,19534,21354,21736,21894,27489,
#Partially deleted in new
chr19	41966581	41994230	chr19:41966581-41994230	1	-	41966936	41994076	8553170	23	384,92,102,131,146,124,155,169,151,137,176,193,135,110,199,269,118,135,114,204,60,87,160,	0,667,1080,2203,2853,3603,3806,9047,9834,11354,11569,12024,14920,15140,15326,18336,18724,19282,19534,21354,21736,21894,27489,
#Partially deleted in new
chr19	41966583	41994270	chr19:41966583-41994270	1	-	41966936	41994076	789624	23	382,92,102,131,146,124,155,169,151,137,176,193,135,110,199,269,118,135,114,204,60,126,200,	0,665,1078,2201,2851,3601,3804,9045,9832,11352,11567,12022,14918,15138,15324,18334,18722,19280,19532,21352,21734,21892,27487,
#Partially deleted in new
chr19	41966583	41994079	chr19:41966583-41994079	1	-	41966936	41988478	789624	23	382,92,102,131,146,124,155,169,151,137,176,193,135,110,199,269,118,135,114,204,60,87,69,	0,665,1078,2201,2851,3601,3804,9045,9832,11352,11567,12022,14918,15138,15324,18334,18722,19280,19532,21352,21734,21892,27427,
#Partially deleted in new
chr19	41966620	41993467	chr19:41966620-41993467	1	-	41966936	41993431	789624	23	345,92,102,131,146,124,155,169,151,137,176,193,135,110,199,269,118,135,114,204,60,87,75,	0,628,1041,2164,2814,3564,3767,9008,9795,11315,11530,11985,14881,15101,15287,18297,18685,19243,19495,21315,21697,21855,26772,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	41984253	41985342	chr19:41984253-41985342	0	-	41984253	41984253	8553170	2	933,37,	0,1052,
#Partially deleted in new
chr19	41985066	41997497	chr19:41985066-41997497	0	-	41985066	41988478	789624	8	120,118,135,114,204,60,87,51,	0,239,797,1049,2869,3251,3409,12380,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	41985209	41986701	chr19:41985209-41986701	0	-	41985209	41985209	8553170	2	214,838,	0,654,
#Partially deleted in new
chr19	41987998	41993522	chr19:41987998-41993522	0	-	41987998	41987998	8553170	4	141,60,87,315,	0,319,477,5209,
#Partially deleted in new
chr19	41988204	41988557	chr19:41988204-41988557	0	-	41988204	41988204	8553170	2	173,82,	0,271,
#Partially deleted in new
chr19	41988475	41993864	chr19:41988475-41993864	0	-	41988475	41988478	8553170	2	87,82,	0,5307,
#Partially deleted in new
chr19	41988489	41992953	chr19:41988489-41992953	0	-	41988489	41988489	8553170	2	73,27,	0,4437,
#Partially deleted in new
chr19	41988490	41993079	chr19:41988490-41993079	0	-	41988490	41988490	8553170	2	72,28,	0,4561,
#Partially deleted in new
chr19	41988507	41990951	chr19:41988507-41990951	0	-	41988507	41988507	8553170	2	55,45,	0,2399,
#Partially deleted in new
chr19	41998320	42065770	chr19:41998320-42065770	1	-	41998870	42065770	789624	19	979,122,129,226,166,174,110,114,204,108,105,153,162,54,179,166,98,165,79,	0,5011,5234,7402,8324,22980,23626,23920,44231,55281,55504,55999,58341,58604,61028,64167,64437,66902,67371,
#Partially deleted in new
chr19	41998320	42042901	chr19:41998320-42042901	0	-	41998320	41998320	8553170	9	979,122,129,226,166,174,110,114,350,	0,5011,5234,7402,8324,22980,23626,23920,44231,
#Partially deleted in new
chr19	41998813	42069498	chr19:41998813-42069498	3	-	41998870	42065770	789624	20	486,122,129,226,166,174,110,114,204,108,105,153,162,54,179,166,98,165,129,258,	0,4518,4741,6909,7831,22487,23133,23427,43738,54788,55011,55506,57848,58111,60535,63674,63944,66409,66878,70427,
#Partially deleted in new
chr19	41999242	42003764	chr19:41999242-42003764	0	-	41999242	41999242	8553170	3	57,122,210,	0,4089,4312,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr19	42001785	42065805	chr19:42001785-42065805	1	-	42002114	42065770	789624	19	761,122,129,226,166,174,110,114,204,108,105,153,162,54,179,166,98,165,114,	0,1546,1769,3937,4859,19515,20161,20455,40766,51816,52039,52534,54876,55139,57563,60702,60972,63437,63906,
#Partially deleted in new
chr19	42021330	42065805	chr19:42021330-42065805	0	-	42063436	42065770	789624	15	144,110,114,204,108,105,153,162,54,179,166,98,225,165,114,	0,616,910,21221,32271,32494,32989,35331,35594,38018,41157,41427,41970,43892,44361,
#Partially deleted in new
chr19	42068476	42081410	chr19:42068476-42081410	1	+	42068711	42081297	789624	2	485,2824,	0,10110,
#Partially deleted in new
chr19	42070365	42081549	chr19:42070365-42081549	3	+	42078606	42081297	789624	2	635,2963,	0,8221,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	42074670	42078982	chr19:42074670-42078982	0	+	42078606	42078982	789624	3	120,342,396,	0,234,3916,
#Deleted in new
chr19	42076165	42081405	chr19:42076165-42081405	1	+	42078606	42081297	789624	2	121,2819,	0,2421,
#Partially deleted in new
chr19	42086109	42132478	chr19:42086109-42132478	3	-	42091551	42132411	0	14	5482,202,67,177,149,142,114,92,106,117,57,35,66,95,	0,5959,7719,9176,9435,9678,9972,13417,13606,31140,36016,36234,36401,46274,
#Partially deleted in new
chr19	42089352	42132476	chr19:42089352-42132476	1	-	42091256	42132411	789624	15	2239,74,202,67,177,149,142,114,92,106,117,57,35,66,93,	0,2514,2716,4476,5933,6192,6435,6729,10174,10363,27897,32773,32991,33158,43031,
#Partially deleted in new
chr19	42089552	42132419	chr19:42089552-42132419	1	-	42091551	42132411	789624	13	2039,202,67,177,149,142,114,92,106,57,35,66,36,	0,2516,4276,5733,5992,6235,6529,9974,10163,32573,32791,32958,42831,
#Partially deleted in new
chr19	42089789	42132427	chr19:42089789-42132427	1	-	42091551	42132411	0	14	1802,202,67,177,149,142,162,92,106,117,57,35,66,44,	0,2279,4039,5496,5755,5998,6292,9737,9926,27460,32336,32554,32721,42594,
#Partially deleted in new
chr19	42090204	42132465	chr19:42090204-42132465	1	-	42092081	42132411	0	14	1387,66,67,177,149,142,114,92,106,117,57,35,66,82,	0,1864,3624,5081,5340,5583,5877,9322,9511,27045,31921,32139,32306,42179,
#Partially deleted in new
chr19	42091077	42132399	chr19:42091077-42132399	0	-	42091489	42132399	789624	14	863,202,67,177,149,142,114,92,106,183,57,35,66,16,	0,991,2751,4208,4467,4710,5004,8449,8638,26172,31048,31266,31433,41306,
#Partially deleted in new
chr19	42091148	42132456	chr19:42091148-42132456	0	-	42110705	42132411	789624	16	443,202,67,177,149,142,162,92,106,59,56,117,57,35,66,73,	0,920,2680,4137,4396,4639,4933,8378,8567,19398,19552,26101,30977,31195,31362,41235,
#Partially deleted in new
chr19	42091159	42095405	chr19:42091159-42095405	0	-	42091256	42095405	789624	4	432,74,67,120,	0,707,2669,4126,
#Partially deleted in new
chr19	42091229	42132419	chr19:42091229-42132419	1	-	42091551	42132411	789624	14	362,202,67,177,149,142,114,92,106,183,57,35,66,36,	0,839,2599,4056,4315,4558,4852,8297,8486,26020,30896,31114,31281,41154,
#Partially deleted in new
chr19	42091814	42132473	chr19:42091814-42132473	1	-	42092064	42132411	0	13	456,67,177,149,142,162,92,106,117,57,35,66,90,	0,2014,3471,3730,3973,4267,7712,7901,25435,30311,30529,30696,40569,
#Deleted in new
chr19	42093466	42095611	chr19:42093466-42095611	0	-	42093766	42095611	789624	3	429,177,67,	0,1819,2078,
#Partially deleted in new
chr19	42095787	42132391	chr19:42095787-42132391	0	-	42095787	42132391	789624	9	142,162,92,106,117,57,35,66,8,	0,294,3739,3928,21462,26338,26556,26723,36596,
#Partially deleted in new
chr19	42095808	42117432	chr19:42095808-42117432	0	-	42095808	42117432	789624	6	121,162,92,106,297,183,	0,273,3718,3907,20900,21441,
#Partially deleted in new
chr19	42099328	42132412	chr19:42099328-42132412	0	-	42099328	42099328	8553170	7	290,106,117,57,35,66,29,	0,387,17921,22797,23015,23182,33055,
#Partially deleted in new
chr19	42099714	42123229	chr19:42099714-42123229	0	-	42099714	42099714	8553170	6	107,117,57,35,66,74,	0,17535,22411,22629,22796,23441,
#Partially deleted in new
chr19	42110705	42132428	chr19:42110705-42132428	1	-	42110705	42132396	789624	6	51,117,57,35,66,45,	0,6544,11420,11638,11805,21678,
#Partially deleted in new
chr19	42116782	42176025	chr19:42116782-42176025	0	-	42116782	42122568	789624	7	223,117,57,35,66,61,63,	0,467,5343,5561,5728,43549,59180,
#Partially deleted in new
chr19	42116923	42177325	chr19:42116923-42177325	0	-	42116923	42122568	789624	7	82,117,57,35,66,61,173,	0,326,5202,5420,5587,43408,60229,
#Partially deleted in new
chr19	42117265	42196585	chr19:42117265-42196585	0	-	42117265	42122568	789624	6	167,57,35,66,61,203,	0,4860,5078,5245,43066,79117,
#Partially deleted in new
chr19	42122092	42122576	chr19:42122092-42122576	0	-	42122092	42122092	8553170	3	90,35,66,	0,251,418,
#Partially deleted in new
chr19	42132554	42137099	chr19:42132554-42137099	3	+	42132554	42132554	789624	3	207,124,428,	0,350,4117,
#Deleted in new
chr19	42133444	42133513	chr19:42133444-42133513	3	-	42133444	42133444	5263520	1	69,	0,
#Partially deleted in new
chr19	42134503	42137087	chr19:42134503-42137087	0	+	42134503	42134503	8553170	2	138,416,	0,2168,
#Deleted in new
chr19	42152568	42157523	chr19:42152568-42157523	3	+	42152568	42152568	8553170	2	138,1817,	0,3138,
#Partially deleted in new
chr19	42198597	42217669	chr19:42198597-42217669	1	-	42199437	42217007	789624	5	1232,141,105,366,38,	0,11102,16550,18082,19034,
#Partially deleted in new
chr19	42198612	42220123	chr19:42198612-42220123	3	-	42199437	42217007	789624	5	1217,141,120,366,50,	0,11087,16520,18067,21461,
#Partially deleted in new
chr19	42198615	42217742	chr19:42198615-42217742	0	-	42198615	42198615	789624	4	1214,141,120,111,	0,11084,16517,19016,
#Partially deleted in new
chr19	42199358	42217716	chr19:42199358-42217716	1	-	42199437	42217007	789624	5	471,141,120,366,85,	0,10341,15774,17321,18273,
#Partially deleted in new
chr19	42199602	42217708	chr19:42199602-42217708	0	-	42199602	42199602	8553170	4	227,141,105,77,	0,10097,15545,18029,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	42201713	42217682	chr19:42201713-42217682	1	-	42202046	42217007	789624	5	359,141,120,366,51,	0,7986,13419,14966,15918,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	42201854	42220140	chr19:42201854-42220140	0	-	42201854	42201854	8553170	4	218,141,120,67,	0,7845,13278,18219,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	42201903	42217757	chr19:42201903-42217757	0	-	42201903	42201903	8553170	4	169,141,120,126,	0,7796,13229,15728,
#Deleted in new
chr19	42215227	42217681	chr19:42215227-42217681	0	-	42215227	42217007	789624	3	25,366,74,	0,1452,2380,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	42220270	42228201	chr19:42220270-42228201	3	+	42224403	42226416	789624	3	117,91,3815,	0,3944,4116,
#Partially deleted in new
chr19	42220376	42224609	chr19:42220376-42224609	0	+	42224403	42224609	789624	3	259,91,223,	0,3838,4010,
#Partially deleted in new
chr19	42230185	42242593	chr19:42230185-42242593	3	-	42230793	42242465	0	11	682,93,187,96,98,107,131,111,84,188,411,	0,1871,2310,2924,3100,4167,4362,6420,6672,9769,11997,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	42230189	42241893	chr19:42230189-42241893	1	-	42230793	42240179	789624	10	678,93,187,96,98,107,131,111,84,1939,	0,1867,2306,2920,3096,4163,4358,6416,6668,9765,
#Partially deleted in new
chr19	42230221	42242625	chr19:42230221-42242625	0	-	42230793	42242465	0	12	170,189,93,187,96,98,107,131,111,84,188,443,	0,457,1835,2274,2888,3064,4131,4326,6384,6636,9733,11961,
#Partially deleted in new
chr19	42230541	42232837	chr19:42230541-42232837	0	-	42230541	42230541	8553170	3	326,93,342,	0,1515,1954,
#Partially deleted in new
chr19	42234582	42255132	chr19:42234582-42255132	3	-	42234582	42254999	789624	5	96,111,84,188,155,	0,2023,2275,5372,20395,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	42242774	42244973	chr19:42242774-42244973	3	+	42242774	42242774	8553170	1	2199,	0,
#Partially deleted in new
chr19	42247571	42255157	chr19:42247571-42255157	3	-	42248464	42254999	789624	4	2167,116,235,180,	0,2255,2759,7406,
#Partially deleted in new
chr19	42248156	42254635	chr19:42248156-42254635	1	-	42248464	42250362	789624	4	1582,116,235,99,	0,1670,2174,6380,
#Deleted in new
chr19	42249527	42250172	chr19:42249527-42250172	0	-	42249527	42249527	8553170	2	211,346,	0,299,
#Partially deleted in new
chr19	42249592	42253899	chr19:42249592-42253899	0	-	42249592	42250362	789624	4	146,116,235,58,	0,234,738,4249,
#Partially deleted in new
chr19	42249621	42250441	chr19:42249621-42250441	0	-	42249621	42250362	789624	3	37,116,111,	0,205,709,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	42250129	42255107	chr19:42250129-42255107	0	-	42250129	42250129	8553170	2	436,130,	0,4848,
#Deleted in new
chr19	42250443	42253894	chr19:42250443-42253894	0	-	42250443	42250443	8553170	3	122,52,53,	0,945,3398,
#Partially deleted in new
chr19	42268536	42295796	chr19:42268536-42295796	3	+	42271783	42295191	789624	21	58,2804,150,235,130,183,166,203,226,104,1234,188,122,167,291,323,245,152,132,132,973,	0,3237,18234,18469,18783,19008,19273,20351,20644,21311,21696,23021,23549,23763,24032,24422,25055,25401,25636,26067,26287,
#Partially deleted in new
chr19	42269223	42272216	chr19:42269223-42272216	0	+	42271783	42272216	789624	2	158,443,	0,2550,
#Deleted in new
chr19	42279991	42286893	chr19:42279991-42286893	0	+	42279991	42279991	8553170	2	212,123,	0,6779,
#Partially deleted in new
chr19	42284019	42295796	chr19:42284019-42295796	1	+	42284704	42295191	789624	20	752,150,235,130,183,166,203,226,104,1234,188,122,167,291,323,245,155,132,132,973,	0,2751,2986,3300,3525,3790,4868,5161,5828,6213,7538,8066,8280,8549,8939,9572,9915,10153,10584,10804,
#Partially deleted in new
chr19	42284664	42295797	chr19:42284664-42295797	1	+	42284704	42295191	0	20	107,150,235,130,183,166,203,226,104,1234,188,122,167,294,326,245,155,132,132,974,	0,2106,2341,2655,2880,3145,4223,4516,5183,5568,6893,7421,7635,7901,8291,8927,9270,9508,9939,10159,
#Deleted in new
chr19	42293606	42295110	chr19:42293606-42295110	0	+	42293606	42295110	789624	5	230,152,126,132,287,	0,331,566,997,1217,
#Deleted in new
chr19	42293656	42295534	chr19:42293656-42295534	0	+	42293656	42295191	789624	5	180,155,126,132,711,	0,278,516,947,1167,
#Deleted in new
chr19	42293750	42295135	chr19:42293750-42295135	0	+	42293750	42294636	789624	5	86,155,132,161,312,	0,184,422,824,1073,
#Deleted in new
chr19	42294459	42295005	chr19:42294459-42295005	0	+	42294459	42294459	8553170	2	276,182,	0,364,
#Partially deleted in new
chr19	42297032	42302571	chr19:42297032-42302571	1	-	42297077	42302309	789624	5	333,123,117,90,340,	0,2937,3138,4917,5199,
#Partially deleted in new
chr19	42297032	42302777	chr19:42297032-42302777	3	-	42297077	42302309	789624	6	333,123,117,90,94,341,	0,2937,3138,4917,5199,5404,
#Partially deleted in new
chr19	42297035	42302292	chr19:42297035-42302292	0	-	42297077	42302292	789624	5	330,51,117,90,61,	0,3006,3135,4914,5196,
#Partially deleted in new
chr19	42297279	42302770	chr19:42297279-42302770	0	-	42297279	42302309	789624	6	86,123,117,90,94,72,	0,2690,2891,4670,4952,5419,
#Partially deleted in new
chr19	42297315	42302728	chr19:42297315-42302728	0	-	42297315	42302309	789624	6	50,84,117,90,94,30,	0,2693,2855,4634,4916,5383,
#Partially deleted in new
chr19	42299916	42302496	chr19:42299916-42302496	0	-	42299916	42299916	8553170	3	371,90,265,	0,2033,2315,
#Partially deleted in new
chr19	42300088	42302777	chr19:42300088-42302777	0	-	42300088	42302309	789624	5	4,117,90,94,341,	0,82,1861,2143,2348,
#Partially deleted in new
chr19	42300170	42303546	chr19:42300170-42303546	0	-	42300170	42302309	789624	4	117,90,94,79,	0,1779,2061,3297,
#Partially deleted in new
chr19	42302097	42310813	chr19:42302097-42310813	1	+	42309584	42310292	789624	2	406,1235,	0,7481,
#Partially deleted in new
chr19	42302131	42310821	chr19:42302131-42310821	3	+	42309584	42310740	789624	3	372,607,551,	0,7447,8139,
#Partially deleted in new
chr19	42306952	42310288	chr19:42306952-42310288	0	+	42309584	42310288	789624	3	121,607,18,	0,2626,3318,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	42308773	42310814	chr19:42308773-42310814	1	+	42309584	42310740	789624	2	1412,544,	0,1497,
#Deleted in new
chr19	42313324	42314937	chr19:42313324-42314937	0	+	42313324	42313324	8553170	5	172,75,78,87,146,	0,947,1126,1288,1467,
#Partially deleted in new
chr19	42313335	42325062	chr19:42313335-42325062	3	+	42313376	42324817	789624	15	161,75,78,87,60,85,72,69,81,79,94,173,121,207,326,	0,936,1115,1277,1456,1657,1852,2036,3145,3326,3534,4373,6981,10247,11401,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	42313376	42321789	chr19:42313376-42321789	1	+	42313376	42321245	789624	14	120,75,108,87,102,85,72,69,81,79,94,173,121,745,	0,895,1044,1236,1415,1616,1811,1995,3104,3285,3493,4332,6940,7668,
#Deleted in new
chr19	42314271	42315002	chr19:42314271-42315002	0	+	42314271	42314271	8553170	5	75,78,87,102,10,	0,179,341,520,721,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	42320358	42321775	chr19:42320358-42321775	0	+	42320358	42321674	789624	3	79,58,201,	0,961,1216,
#Boundary problem: need 41, got 0, diff 41, mapped 0.0
chr19	42325608	42378769	chr19:42325608-42378769	3	+	42326243	42376775	789624	41	822,164,207,181,89,416,146,123,155,120,145,164,201,237,119,132,114,249,200,211,250,133,248,111,119,208,181,164,168,145,232,124,214,215,208,160,193,171,131,133,3263,	0,7996,8398,9426,9688,10322,11198,11475,17868,18345,18832,19061,23890,24539,25607,25820,26039,26599,27319,27856,28166,28979,30149,30474,30726,31165,31795,32535,33178,33489,35166,36481,36775,37439,42846,43234,43922,44580,45092,45741,49898,
#Boundary problem: need 41, got 0, diff 41, mapped 0.0
chr19	42325608	42378769	chr19:42325608-42378769	1	+	42370780	42376775	789624	41	822,164,207,181,89,416,146,123,155,120,145,164,201,201,237,119,132,114,249,200,211,250,133,248,111,119,208,181,164,168,145,232,124,214,215,208,160,193,171,131,3263,	0,7996,8398,9426,9688,10322,11198,11475,17868,18345,18832,19061,22663,23890,24539,25607,25820,26039,26599,27319,27856,28166,28979,30149,30474,30726,31165,31795,32535,33178,33489,35166,36481,36775,37439,42846,43234,43922,44580,45092,49898,
#Boundary problem: need 42, got 0, diff 42, mapped 0.0
chr19	42326243	42377786	chr19:42326243-42377786	1	+	42326243	42376775	789624	42	187,164,207,181,89,416,146,123,155,120,145,164,201,201,237,119,132,114,249,200,211,250,133,248,111,119,208,181,164,168,145,232,124,214,215,208,160,193,171,131,133,2280,	0,7361,7763,8791,9053,9687,10563,10840,17233,17710,18197,18426,22028,23255,23904,24972,25185,25404,25964,26684,27221,27531,28344,29514,29839,30091,30530,31160,31900,32543,32854,34531,35846,36140,36804,42211,42599,43287,43945,44457,45106,49263,
#Deleted in new
chr19	42351130	42351205	chr19:42351130-42351205	3	+	42351130	42351130	5263520	1	75,	0,
#Deleted in new
chr19	42352795	42353668	chr19:42352795-42353668	0	+	42352795	42352795	8553170	2	332,204,	0,669,
#Partially deleted in new
chr19	42360969	42378763	chr19:42360969-42378763	0	+	42360969	42378750	789624	3	37,124,64,	0,1120,17730,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	42369630	42377802	chr19:42369630-42377802	0	+	42369630	42375648	789624	4	93,171,131,2296,	0,558,1070,5876,
#Partially deleted in new
chr19	42370627	42375962	chr19:42370627-42375962	0	+	42370627	42370627	8553170	2	204,456,	0,4879,
#Partially deleted in new
chr19	42387018	42390287	chr19:42387018-42390287	3	-	42387152	42389037	789624	4	224,137,114,48,	0,321,1907,3221,
#Partially deleted in new
chr19	42387100	42390268	chr19:42387100-42390268	1	-	42387152	42389037	789624	5	142,137,114,80,29,	0,239,1825,2388,3139,
#Partially deleted in new
chr19	42397127	42408452	chr19:42397127-42408452	0	+	42397127	42397127	789624	2	97,195,	0,11130,
#Partially deleted in new
chr19	42397167	42485594	chr19:42397167-42485594	0	+	42397167	42397167	8553170	2	57,499,	0,87928,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	42397173	42652355	chr19:42397173-42652355	3	+	42397173	42397173	789624	3	51,128,1269,	0,87922,253913,
#Partially deleted in new
chr19	42401506	42427426	chr19:42401506-42427426	3	-	42401811	42427149	789624	10	569,425,177,228,295,186,146,91,536,1160,	0,1100,3878,4654,5667,6099,6469,6725,8800,24760,
#Partially deleted in new
chr19	42401581	42408442	chr19:42401581-42408442	0	+	42401581	42401581	8553170	2	66,185,	0,6676,
#Partially deleted in new
chr19	42401815	42407226	chr19:42401815-42407226	0	-	42401815	42407226	789624	4	260,425,177,53,	0,791,3569,5358,
#Partially deleted in new
chr19	42402036	42406319	chr19:42402036-42406319	0	-	42402036	42406319	789624	4	39,449,177,159,	0,570,3348,4124,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	42402672	42405837	chr19:42402672-42405837	0	-	42402672	42402672	8553170	2	359,453,	0,2712,
#Partially deleted in new
chr19	42407399	42423222	chr19:42407399-42423222	0	-	42407399	42407399	8553170	5	69,186,146,91,230,	0,206,576,832,15593,
#Partially deleted in new
chr19	42408086	42424123	chr19:42408086-42424123	0	-	42408086	42423536	789624	4	35,91,536,705,	0,145,2220,15332,
#Partially deleted in new
chr19	42408094	42412448	chr19:42408094-42412448	0	-	42408094	42412377	789624	4	27,91,536,84,	0,137,2212,4270,
#Partially deleted in new
chr19	42408310	42423203	chr19:42408310-42423203	0	-	42408310	42410822	789624	3	12,536,211,	0,1996,14682,
#Partially deleted in new
chr19	42410581	42412347	chr19:42410581-42412347	0	-	42410581	42410822	789624	2	261,74,	0,1692,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	42423754	42652019	chr19:42423754-42652019	1	+	42423754	42423754	789624	2	1450,933,	0,227332,
#Partially deleted in new
chr19	42424268	42525869	chr19:42424268-42525869	1	+	42424268	42424268	8553170	5	936,128,78,107,252,	0,60827,86628,97723,101349,
#Partially deleted in new
chr19	42424312	42485226	chr19:42424312-42485226	0	+	42424312	42424312	8553170	2	830,92,	0,60822,
#Deleted in new
chr19	42424383	42425071	chr19:42424383-42425071	3	-	42424383	42424383	8553170	2	153,408,	0,280,
#Partially deleted in new
chr19	42428287	42443048	chr19:42428287-42443048	3	-	42428883	42442832	789624	4	694,102,81,295,	0,4688,5488,14466,
#Partially deleted in new
chr19	42428532	42442852	chr19:42428532-42442852	0	-	42433065	42442832	789624	4	449,119,81,99,	0,4443,5243,14221,
#Partially deleted in new
chr19	42460847	42485473	chr19:42460847-42485473	0	+	42460847	42460847	8553170	2	195,378,	0,24248,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	42472874	42473009	chr19:42472874-42473009	3	+	42472874	42472874	8553170	1	135,	0,
#Deleted in new
chr19	42485075	42485714	chr19:42485075-42485714	7	-	42485075	42485075	16724991	1	639,	0,
#Partially deleted in new
chr19	42507303	42528446	chr19:42507303-42528446	1	-	42509108	42528374	0	8	1925,32,53,130,255,279,360,136,	0,3585,4272,5046,13963,14620,19737,21007,
#Partially deleted in new
chr19	42507305	42528509	chr19:42507305-42528509	3	-	42509108	42528374	0	9	1923,32,53,130,288,255,279,360,199,	0,3583,4270,5044,11642,13961,14618,19735,21005,
#Partially deleted in new
chr19	42507313	42528478	chr19:42507313-42528478	1	-	42510901	42528374	0	8	1915,32,130,288,255,279,360,168,	0,3575,5036,11634,13953,14610,19727,20997,
#Partially deleted in new
chr19	42509091	42528380	chr19:42509091-42528380	1	-	42510901	42528374	0	7	137,32,130,255,279,360,70,	0,1797,3258,12175,12832,17949,19219,
#Partially deleted in new
chr19	42509099	42512411	chr19:42509099-42512411	0	-	42509099	42509099	8553170	5	129,32,153,53,62,	0,1789,2158,2476,3250,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	42509102	42528466	chr19:42509102-42528466	1	-	42509108	42528374	0	9	126,32,53,130,93,255,279,360,156,	0,1786,2473,3247,5908,12164,12821,17938,19208,
#Partially deleted in new
chr19	42509103	42511084	chr19:42509103-42511084	0	-	42509103	42509103	8553170	2	125,196,	0,1785,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	42509206	42528481	chr19:42509206-42528481	1	-	42510901	42528374	0	8	22,32,130,93,255,279,360,171,	0,1682,3143,7566,12060,12717,17834,19104,
#Partially deleted in new
chr19	42510888	42519463	chr19:42510888-42519463	0	-	42510888	42510888	8553170	3	32,130,516,	0,1461,8059,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	42518515	42528449	chr19:42518515-42528449	0	-	42518515	42518515	8553170	5	586,255,279,360,139,	0,2751,3408,8525,9795,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	42518515	42528469	chr19:42518515-42528469	0	-	42518515	42518515	8553170	5	720,255,279,360,159,	0,2751,3408,8525,9795,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	42520541	42528469	chr19:42520541-42528469	0	-	42520541	42520541	8553170	4	980,279,360,159,	0,1382,6499,7769,
#Partially deleted in new
chr19	42527047	42561234	chr19:42527047-42561234	0	-	42527047	42527344	789624	3	353,44,37,	0,697,34150,
#Deleted in new
chr19	42527061	42527822	chr19:42527061-42527822	0	-	42527061	42527344	789624	2	339,78,	0,683,
#Deleted in new
chr19	42560432	42561750	chr19:42560432-42561750	7	-	42560432	42560432	16724991	2	362,78,	0,1240,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	42580240	42594930	chr19:42580240-42594930	3	-	42583245	42594828	0	6	1113,132,255,279,360,166,	0,2965,8543,9216,13300,14524,
#Partially deleted in new
chr19	42583084	42595055	chr19:42583084-42595055	1	-	42583245	42594828	789624	2	253,291,	0,11680,
#Partially deleted in new
chr19	42620211	42633034	chr19:42620211-42633034	7	-	42620211	42620211	16724991	5	77,255,279,360,64,	0,5585,6240,11526,12759,
#Partially deleted in new
chr19	42654199	42669076	chr19:42654199-42669076	7	+	42654199	42654199	16724991	5	64,363,279,163,92,	0,941,7448,8052,14785,
#Partially deleted in new
chr19	42670004	42670816	chr19:42670004-42670816	7	+	42670004	42670004	16724991	2	39,459,	0,353,
#Partially deleted in new
chr19	42723981	42740384	chr19:42723981-42740384	1	-	42723981	42740384	789624	6	44,255,279,279,366,64,	0,5141,5796,8802,14742,16339,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	42731907	42740474	chr19:42731907-42740474	0	-	42731907	42731907	8553170	3	1155,366,154,	0,6816,8413,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	42733588	42739476	chr19:42733588-42739476	0	-	42733588	42733588	8553170	4	138,149,366,156,	0,458,5135,5732,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	42752685	42765678	chr19:42752685-42765678	1	-	42753359	42765581	789624	6	691,255,279,279,366,161,	0,1647,2302,5316,11230,12832,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	42752690	42756124	chr19:42752690-42756124	0	-	42752690	42752690	8553170	2	686,1792,	0,1642,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	42752691	42758895	chr19:42752691-42758895	0	-	42752691	42752691	8553170	4	685,255,279,294,	0,1641,5310,5910,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	42752724	42765662	chr19:42752724-42765662	1	-	42753359	42765581	789624	5	652,255,279,279,145,	0,1608,2263,5277,12793,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	42752726	42855691	chr19:42752726-42855691	1	-	42753359	42855619	789624	5	650,255,279,366,136,	0,1606,2261,11189,102829,
#Partially deleted in new
chr19	42754232	42765679	chr19:42754232-42765679	3	-	42754294	42765581	789624	5	355,279,279,366,162,	0,755,3769,9683,11285,
#Partially deleted in new
chr19	42754987	42765667	chr19:42754987-42765667	0	-	42754987	42754987	8553170	4	279,279,310,150,	0,3014,3614,10530,
#Partially deleted in new
chr19	42754991	42765669	chr19:42754991-42765669	0	-	42758882	42765581	789624	4	275,279,340,152,	0,3010,3610,10526,
#Partially deleted in new
chr19	42763691	42765663	chr19:42763691-42765663	0	-	42763691	42763691	8553170	2	590,146,	0,1826,
#Partially deleted in new
chr19	42781205	42786595	chr19:42781205-42786595	7	-	42781205	42781205	16724991	3	92,239,243,	0,4521,5147,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	42821862	42826878	chr19:42821862-42826878	3	+	42821862	42821862	789624	4	51,963,413,446,	0,950,3069,4570,
#Partially deleted in new
chr19	42839367	42855718	chr19:42839367-42855718	7	-	42839367	42839367	16724991	6	11,209,255,279,366,163,	0,188,4991,5648,14581,16188,
#Partially deleted in new
chr19	42844356	42855619	chr19:42844356-42855619	5	-	42844356	42844356	16724991	6	257,279,255,279,366,64,	0,659,3011,3666,9592,11199,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	42866463	42879698	chr19:42866463-42879698	1	-	42867133	42879581	789624	6	687,255,279,279,366,181,	0,1637,2292,5303,11449,13054,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	42866465	42879710	chr19:42866465-42879710	1	-	42867053	42879581	789624	5	599,255,279,366,193,	0,1635,2290,11447,13052,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	42866465	42870645	chr19:42866465-42870645	0	-	42866465	42866465	8553170	3	685,255,1890,	0,1635,2290,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	42866470	42879647	chr19:42866470-42879647	1	-	42867053	42879581	789624	6	594,255,279,279,366,130,	0,1630,2285,5296,11442,13047,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	42866482	42879671	chr19:42866482-42879671	1	-	42867133	42879581	789624	5	668,255,279,366,154,	0,1618,2273,11430,13035,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	42867192	42879667	chr19:42867192-42879667	1	-	42867701	42879581	789624	6	553,255,279,279,366,150,	0,908,1563,4574,10720,12325,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	42867205	42879719	chr19:42867205-42879719	3	-	42868062	42879581	789624	5	1150,279,279,366,202,	0,1550,4561,10707,12312,
#Partially deleted in new
chr19	42868100	42878103	chr19:42868100-42878103	0	-	42868100	42878103	789624	3	255,279,191,	0,3666,9812,
#Partially deleted in new
chr19	42871800	42878424	chr19:42871800-42878424	0	-	42871800	42878129	789624	2	245,512,	0,6112,
#Partially deleted in new
chr19	42874101	42879680	chr19:42874101-42879680	0	-	42874101	42874101	8553170	3	42,366,163,	0,3811,5416,
#Partially deleted in new
chr19	42876738	42879822	chr19:42876738-42879822	0	-	42876738	42876738	8553170	3	83,366,305,	0,1174,2779,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	42902078	42917858	chr19:42902078-42917858	1	-	42902411	42917792	789624	6	368,255,279,279,363,130,	0,4843,5497,8501,14046,15650,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	42902085	42917882	chr19:42902085-42917882	3	-	42902411	42917792	789624	5	361,255,279,363,154,	0,4836,8494,14039,15643,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	42902120	42910804	chr19:42902120-42910804	0	-	42907917	42910804	789624	4	326,255,362,225,	0,4801,5455,8459,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	42903615	42917837	chr19:42903615-42917837	1	-	42903653	42917792	789624	6	106,255,279,279,363,109,	0,3306,3960,6964,12509,14113,
#Partially deleted in new
chr19	42906635	42916398	chr19:42906635-42916398	0	-	42906635	42906635	8553170	3	541,279,274,	0,3944,9489,
#Partially deleted in new
chr19	42907724	42917887	chr19:42907724-42917887	0	-	42907724	42917792	789624	3	130,279,159,	0,2855,10004,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	42909698	42917882	chr19:42909698-42917882	0	-	42909698	42909698	8553170	3	1160,363,154,	0,6426,8030,
#Partially deleted in new
chr19	42910475	42918010	chr19:42910475-42918010	0	-	42910475	42910475	8553170	2	383,282,	0,7253,
#Partially deleted in new
chr19	42915301	42919563	chr19:42915301-42919563	1	-	42916116	42916338	789624	2	1186,1135,	0,3127,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	42924131	42927577	chr19:42924131-42927577	0	-	42924131	42924131	8553170	2	693,1805,	0,1641,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	42924139	42937173	chr19:42924139-42937173	1	-	42924807	42937076	789624	6	685,255,279,279,366,161,	0,1633,2298,5302,11264,12873,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	42924331	42937098	chr19:42924331-42937098	1	-	42924807	42937076	789624	5	493,255,279,279,86,	0,1441,2106,5110,12681,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	42924878	42937166	chr19:42924878-42937166	3	-	42925734	42937076	789624	5	1149,279,279,366,154,	0,1559,4563,10525,12134,
#Partially deleted in new
chr19	42929188	42935557	chr19:42929188-42935557	0	-	42929188	42929188	8553170	2	532,154,	0,6215,
#Partially deleted in new
chr19	42936156	42937178	chr19:42936156-42937178	0	-	42936156	42936156	8553170	2	339,166,	0,856,
#Partially deleted in new
chr19	42949502	42950387	chr19:42949502-42950387	7	-	42949502	42949502	16724991	2	255,241,	0,644,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	42977462	43171515	chr19:42977462-43171515	3	+	42977462	42977462	8553170	3	182,140,1511,	0,124098,192542,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	43007899	43026469	chr19:43007899-43026469	1	-	43009997	43026372	789624	5	211,84,255,279,161,	0,2058,7216,10870,18409,
#Partially deleted in new
chr19	43010269	43015274	chr19:43010269-43015274	0	-	43010269	43010269	8553170	2	158,159,	0,4846,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	43014080	43026462	chr19:43014080-43026462	0	-	43014080	43014080	8553170	3	1290,366,154,	0,10610,12228,
#Partially deleted in new
chr19	43014253	43026462	chr19:43014253-43026462	0	-	43014253	43014253	8553170	4	1117,279,366,154,	0,1513,10437,12055,
#Partially deleted in new
chr19	43015119	43026448	chr19:43015119-43026448	0	-	43015119	43026372	789624	4	251,279,366,140,	0,647,9571,11189,
#Partially deleted in new
chr19	43017230	43019047	chr19:43017230-43019047	0	-	43017230	43017230	8553170	2	371,278,	0,1539,
#Partially deleted in new
chr19	43018341	43024844	chr19:43018341-43024844	0	-	43018341	43018341	8553170	2	707,154,	0,6349,
#Partially deleted in new
chr19	43018687	43026474	chr19:43018687-43026474	0	-	43018687	43018687	8553170	2	361,166,	0,7621,
#Partially deleted in new
chr19	43024466	43026454	chr19:43024466-43026454	0	-	43024466	43024466	8553170	2	590,146,	0,1842,
#Partially deleted in new
chr19	43035868	43041248	chr19:43035868-43041248	7	-	43035868	43035868	16724991	3	92,255,233,	0,4505,5147,
#Partially deleted in new
chr19	43065488	43075407	chr19:43065488-43075407	0	-	43066556	43075407	789624	4	402,84,255,54,	0,1028,6211,9865,
#Partially deleted in new
chr19	43071770	43083045	chr19:43071770-43083045	0	-	43071770	43071770	8553170	3	184,279,94,	0,580,11181,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	43081786	43082668	chr19:43081786-43082668	0	-	43081786	43081786	8553170	2	485,163,	0,719,
#Partially deleted in new
chr19	43096455	43097360	chr19:43096455-43097360	7	-	43096455	43096455	16724991	2	248,265,	0,640,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	43101560	43137851	chr19:43101560-43137851	0	+	43101560	43101560	8553170	2	140,335,	0,35956,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	43153278	43160862	chr19:43153278-43160862	3	+	43153278	43153278	8553170	3	333,154,13,	0,1893,7571,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	43166255	43186536	chr19:43166255-43186536	1	-	43170094	43186405	789624	6	587,84,255,279,366,195,	0,3799,8959,9614,18526,20086,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	43174122	43186494	chr19:43174122-43186494	1	-	43175176	43186405	789624	4	1347,279,366,153,	0,1747,10659,12219,
#Partially deleted in new
chr19	43175662	43186494	chr19:43175662-43186494	0	-	43175662	43175662	8553170	3	486,366,153,	0,9119,10679,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	43180346	43184935	chr19:43180346-43184935	0	-	43180346	43180346	8553170	2	250,154,	0,4435,
#Partially deleted in new
chr19	43183281	43186506	chr19:43183281-43186506	0	-	43183281	43183281	8553170	3	190,366,165,	0,1500,3060,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	43192701	43205774	chr19:43192701-43205774	3	-	43193371	43205536	789624	6	687,255,279,279,366,302,	0,1638,2293,5295,11184,12771,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	43192703	43205774	chr19:43192703-43205774	1	-	43193371	43205536	789624	5	685,255,279,366,302,	0,1636,2291,11182,12769,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	43192737	43194886	chr19:43192737-43194886	0	-	43192737	43192737	8553170	2	651,547,	0,1602,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	43192750	43205563	chr19:43192750-43205563	1	-	43193371	43205536	789624	5	638,255,279,366,91,	0,1589,5246,11135,12722,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	43193954	43195149	chr19:43193954-43195149	0	-	43193954	43193954	8553170	2	640,155,	0,1040,
#Partially deleted in new
chr19	43194339	43205635	chr19:43194339-43205635	0	-	43194339	43205536	789624	4	255,279,279,163,	0,655,3657,11133,
#Partially deleted in new
chr19	43194397	43205551	chr19:43194397-43205551	0	-	43194397	43205536	789624	3	197,279,79,	0,3599,11075,
#Partially deleted in new
chr19	43194405	43205633	chr19:43194405-43205633	0	-	43198035	43205536	789624	4	189,279,134,161,	0,589,3591,11067,
#Partially deleted in new
chr19	43194508	43204251	chr19:43194508-43204251	0	-	43194508	43204251	789624	3	86,279,366,	0,486,9377,
#Partially deleted in new
chr19	43194998	43205612	chr19:43194998-43205612	0	-	43198878	43205536	789624	4	275,279,340,140,	0,2998,3599,10474,
#Partially deleted in new
chr19	43196457	43198274	chr19:43196457-43198274	0	-	43196816	43198274	789624	2	370,278,	0,1539,
#Partially deleted in new
chr19	43197743	43204051	chr19:43197743-43204051	0	-	43197743	43197743	8553170	2	532,166,	0,6142,
#Partially deleted in new
chr19	43197914	43205638	chr19:43197914-43205638	0	-	43197914	43197914	8553170	2	361,166,	0,7558,
#Partially deleted in new
chr19	43197996	43205638	chr19:43197996-43205638	0	-	43197996	43204874	789624	4	279,366,185,166,	0,5889,6766,7476,
#Partially deleted in new
chr19	43198257	43204614	chr19:43198257-43204614	0	-	43198257	43204102	789624	3	18,366,142,	0,5628,6215,
#Partially deleted in new
chr19	43203088	43207299	chr19:43203088-43207299	0	-	43203088	43203088	8553170	2	1163,1131,	0,3080,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	43211790	43269530	chr19:43211790-43269530	1	-	43212458	43269431	789624	5	685,255,279,366,163,	0,46411,47066,55993,57577,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	43211790	43248646	chr19:43211790-43248646	7	-	43211790	43211790	16724991	9	685,127,255,68,141,102,71,116,156,	0,3462,8197,11100,12381,18133,21433,36217,36700,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	43211790	43260746	chr19:43211790-43260746	0	-	43211790	43211790	8553170	3	685,255,1890,	0,46411,47066,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	43211791	43269523	chr19:43211791-43269523	1	-	43212458	43269431	789624	6	684,255,279,279,366,156,	0,46410,47065,50068,55992,57576,
#Partially deleted in new
chr19	43219987	43220871	chr19:43219987-43220871	5	-	43219987	43219987	16724991	2	255,241,	0,643,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	43253278	43269528	chr19:43253278-43269528	1	-	43253608	43269431	789624	5	368,255,279,366,161,	0,4923,8581,14505,16089,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	43253281	43269528	chr19:43253281-43269528	3	-	43253608	43269431	789624	6	365,255,279,279,366,161,	0,4920,5575,8578,14502,16086,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	43253282	43269437	chr19:43253282-43269437	1	-	43253608	43269431	789624	4	364,255,366,70,	0,4919,14501,16085,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	43253286	43269528	chr19:43253286-43269528	1	-	43253608	43269431	789624	5	360,255,279,366,161,	0,4915,5570,14497,16081,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	43257159	43269498	chr19:43257159-43269498	1	-	43257956	43269431	789624	4	1297,279,366,131,	0,4700,10624,12208,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	43257164	43269521	chr19:43257164-43269521	1	-	43257956	43269431	789624	3	1292,366,154,	0,10619,12203,
#Partially deleted in new
chr19	43278932	43284318	chr19:43278932-43284318	7	-	43278932	43278932	16724991	3	87,255,241,	0,4503,5145,
#Deleted in new
chr19	43303170	43304523	chr19:43303170-43304523	7	-	43303170	43303170	16724991	2	366,55,	0,1298,
#Duplicated in new
chr19	43329294	43331430	chr19:43329294-43331430	3	-	43329294	43329294	8553170	2	214,87,	0,2049,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	43353658	43363172	chr19:43353658-43363172	3	+	43353714	43362320	789624	9	108,141,186,123,117,141,186,135,1085,	0,194,548,2002,2333,6606,7484,7786,8429,
#Deleted in new
chr19	43353690	43354525	chr19:43353690-43354525	1	+	43353714	43354433	789624	3	76,141,319,	0,162,516,
#Partially deleted in new
chr19	43353714	43362372	chr19:43353714-43362372	0	+	43353714	43355573	789624	9	52,141,186,269,117,141,186,135,285,	0,138,492,1800,2277,6550,7428,7730,8373,
#Partially deleted in new
chr19	43360684	43368970	chr19:43360684-43368970	3	-	43360684	43360684	8553170	3	159,158,142,	0,1785,8144,
#Deleted in new
chr19	43372741	43379123	chr19:43372741-43379123	7	-	43372741	43372741	16724991	6	233,135,186,141,117,123,	0,459,710,1633,5933,6259,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	43401495	43418597	chr19:43401495-43418597	3	+	43406504	43418397	789624	8	66,94,297,103,144,183,129,430,	0,1270,4727,14385,14603,14877,16382,16672,
#Partially deleted in new
chr19	43414887	43418597	chr19:43414887-43418597	0	+	43414887	43414887	8553170	6	65,103,144,183,129,430,	0,993,1211,1485,2990,3280,
#Partially deleted in new
chr19	43414911	43418593	chr19:43414911-43418593	1	+	43415919	43418397	789624	6	127,103,144,183,129,426,	0,969,1187,1461,2966,3256,
#Partially deleted in new
chr19	43460786	43465660	chr19:43460786-43465660	3	-	43461350	43465571	789624	5	1061,162,171,132,168,	0,2339,2812,3538,4706,
#Partially deleted in new
chr19	43461442	43465606	chr19:43461442-43465606	0	-	43461442	43461442	8553170	4	405,644,132,114,	0,1683,2882,4050,
#Partially deleted in new
chr19	43461800	43463963	chr19:43461800-43463963	0	-	43461800	43461800	8553170	3	47,162,365,	0,1325,1798,
#Partially deleted in new
chr19	43464004	43465608	chr19:43464004-43465608	0	-	43464004	43464004	8553170	2	452,116,	0,1488,
#Partially deleted in new
chr19	43474953	43495694	chr19:43474953-43495694	0	-	43474953	43474953	8553170	10	591,86,115,57,88,91,100,114,84,200,	0,3093,4423,11312,11655,11826,12070,19748,20302,20541,
#Partially deleted in new
chr19	43475102	43504935	chr19:43475102-43504935	3	-	43475409	43504118	789624	16	442,86,217,57,88,91,100,114,84,126,162,129,138,183,227,347,	0,2944,4274,11163,11506,11677,11921,19599,20153,20392,22015,22645,26631,26998,28803,29486,
#Partially deleted in new
chr19	43479449	43497828	chr19:43479449-43497828	0	-	43479449	43497828	789624	6	144,114,84,111,162,81,	0,15252,15806,16045,17668,18298,
#Partially deleted in new
chr19	43479453	43487041	chr19:43479453-43487041	0	-	43479453	43479453	8553170	4	140,57,88,262,	0,6812,7155,7326,
#Partially deleted in new
chr19	43479512	43494750	chr19:43479512-43494750	0	-	43479512	43494750	789624	5	81,57,88,91,49,	0,6753,7096,7267,15189,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	43496017	43504935	chr19:43496017-43504935	1	-	43497102	43504118	789624	6	1262,129,138,183,227,347,	0,1730,5716,6083,7888,8571,
#Partially deleted in new
chr19	43501529	43504644	chr19:43501529-43504644	0	-	43501529	43501529	8553170	4	342,183,227,56,	0,571,2376,3059,
#Partially deleted in new
chr19	43502165	43504414	chr19:43502165-43504414	0	-	43502165	43504118	789624	2	118,509,	0,1740,
#Partially deleted in new
chr19	43502193	43504711	chr19:43502193-43504711	0	-	43502193	43504118	789624	3	90,333,123,	0,1712,2395,
#Partially deleted in new
chr19	43506718	43527244	chr19:43506718-43527244	3	-	43506849	43527177	0	7	184,117,90,130,149,145,148,	0,1225,2056,4718,19482,19796,20378,
#Partially deleted in new
chr19	43506791	43527205	chr19:43506791-43527205	0	-	43511504	43527177	789624	6	111,117,90,130,145,109,	0,1152,1983,4645,19723,20305,
#Partially deleted in new
chr19	43507627	43527201	chr19:43507627-43527201	1	-	43507872	43527177	789624	6	433,90,130,149,145,105,	0,1147,3809,18573,18887,19469,
#Partially deleted in new
chr19	43507636	43527222	chr19:43507636-43527222	0	-	43511504	43527177	789624	5	424,90,130,145,126,	0,1138,3800,18878,19460,
#Partially deleted in new
chr19	43511468	43527192	chr19:43511468-43527192	0	-	43527021	43527177	789624	4	98,149,145,256,	0,14732,15046,15468,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	43525496	43536130	chr19:43525496-43536130	1	+	43526491	43535687	789624	5	742,200,76,165,1102,	0,930,6308,8840,9532,
#Deleted in new
chr19	43526200	43527230	chr19:43526200-43527230	0	-	43526200	43526200	8553170	2	459,134,	0,896,
#Deleted in new
chr19	43532963	43535252	chr19:43532963-43535252	0	+	43534422	43535252	789624	3	147,165,224,	0,1373,2065,
#Deleted in new
chr19	43533203	43535735	chr19:43533203-43535735	3	+	43534422	43535687	789624	4	318,108,165,707,	0,591,1133,1825,
#Deleted in new
chr19	43533412	43535801	chr19:43533412-43535801	1	+	43534422	43535687	789624	4	109,108,96,773,	0,382,993,1616,
#Deleted in new
chr19	43533435	43534266	chr19:43533435-43534266	0	+	43533435	43533435	8553170	2	86,472,	0,359,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr19	43543039	43576006	chr19:43543039-43576006	3	-	43543391	43575458	789624	17	466,76,91,140,55,133,94,117,259,112,110,112,75,159,111,93,599,	0,572,1104,2778,3012,3555,3844,8531,8977,9757,9942,10361,10569,11606,17870,31870,32368,
#Partially deleted in new
chr19	43543311	43575563	chr19:43543311-43575563	1	-	43543391	43575458	789624	16	194,76,91,140,55,133,94,117,259,112,110,112,75,159,111,156,	0,300,832,2506,2740,3283,3572,8259,8705,9485,9670,10089,10297,11334,17598,32096,
#Partially deleted in new
chr19	43551570	43560949	chr19:43551570-43560949	0	-	43552212	43560949	789624	7	117,259,47,112,75,159,40,	0,446,1226,1830,2038,3075,9339,
#Partially deleted in new
chr19	43552072	43575506	chr19:43552072-43575506	0	-	43552072	43552072	8553170	8	203,295,112,75,159,111,93,99,	0,724,1328,1536,2573,8837,22837,23335,
#Deleted in new
chr19	43552077	43553777	chr19:43552077-43553777	0	-	43552077	43552077	8553170	5	198,112,110,112,169,	0,719,904,1323,1531,
#Partially deleted in new
chr19	43552243	43580473	chr19:43552243-43580473	0	-	43552243	43580436	789624	9	32,112,110,112,75,159,111,93,109,	0,553,738,1157,1365,2402,8666,22666,28121,
#Partially deleted in new
chr19	43552990	43580434	chr19:43552990-43580434	0	-	43552990	43580434	789624	6	101,112,75,159,111,70,	0,410,618,1655,7919,27374,
#Partially deleted in new
chr19	43553064	43575527	chr19:43553064-43575527	0	-	43553064	43575458	789624	6	27,112,75,159,93,120,	0,336,544,1581,21845,22343,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	43553444	43555494	chr19:43553444-43555494	3	+	43553444	43553444	8553170	2	83,478,	0,1572,
#Partially deleted in new
chr19	43554691	43593036	chr19:43554691-43593036	3	-	43554691	43593036	789624	3	113,111,169,	0,6218,38176,
#Deleted in new
chr19	43574528	43575504	chr19:43574528-43575504	0	-	43574528	43574528	8553170	2	474,97,	0,879,
#Deleted in new
chr19	43574637	43575618	chr19:43574637-43575618	3	+	43574637	43574637	8553170	2	326,220,	0,761,
#Partially deleted in new
chr19	43576799	43579086	chr19:43576799-43579086	0	+	43576799	43576799	8553170	3	120,147,497,	0,315,1790,
#Partially deleted in new
chr19	43576799	43582103	chr19:43576799-43582103	3	+	43577119	43582001	789624	6	120,147,117,153,141,236,	0,315,1790,4412,4763,5068,
#Partially deleted in new
chr19	43577191	43582098	chr19:43577191-43582098	1	+	43577191	43582001	789624	5	70,117,153,141,231,	0,1398,4020,4371,4676,
#Partially deleted in new
chr19	43580543	43582098	chr19:43580543-43582098	1	+	43581288	43582001	789624	4	44,153,141,231,	0,668,1019,1324,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	43580637	43583964	chr19:43580637-43583964	0	+	43580637	43580637	8553170	3	32,153,2402,	0,574,925,
#Partially deleted in new
chr19	43580637	43582098	chr19:43580637-43582098	1	+	43581288	43582001	789624	4	32,153,141,231,	0,574,925,1230,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	43581036	43582104	chr19:43581036-43582104	1	+	43581288	43582001	789624	3	328,141,237,	0,526,831,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	43584368	43596135	chr19:43584368-43596135	3	-	43592025	43595338	789624	3	8999,532,154,	0,10440,11613,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	43585935	43589687	chr19:43585935-43589687	0	-	43585935	43585935	8553170	1	3752,	0,
#Partially deleted in new
chr19	43586276	43593007	chr19:43586276-43593007	0	-	43586276	43586276	8553170	2	244,251,	0,6480,
#Partially deleted in new
chr19	43591873	43595524	chr19:43591873-43595524	1	-	43592025	43595338	789624	2	1494,716,	0,2935,
#Partially deleted in new
chr19	43594930	43596135	chr19:43594930-43596135	0	-	43594930	43595338	789624	2	410,154,	0,1051,
#Partially deleted in new
chr19	43596391	43600004	chr19:43596391-43600004	1	+	43597108	43599258	789624	3	194,100,1174,	0,702,2439,
#Partially deleted in new
chr19	43596406	43600370	chr19:43596406-43600370	1	+	43597108	43599258	789624	2	787,1540,	0,2424,
#Partially deleted in new
chr19	43596479	43599494	chr19:43596479-43599494	1	+	43597108	43599258	789624	3	106,97,664,	0,617,2351,
#Partially deleted in new
chr19	43596574	43599525	chr19:43596574-43599525	1	+	43597108	43599258	789624	3	64,100,695,	0,519,2256,
#Partially deleted in new
chr19	43596594	43599414	chr19:43596594-43599414	1	+	43597108	43599258	789624	3	149,97,584,	0,502,2236,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	43596604	43601157	chr19:43596604-43601157	3	+	43597108	43599258	789624	3	139,100,2327,	0,489,2226,
#Deleted in new
chr19	43596614	43597545	chr19:43596614-43597545	0	+	43596614	43596614	8553170	2	129,452,	0,479,
#Partially deleted in new
chr19	43596616	43614497	chr19:43596616-43614497	3	+	43612121	43614269	789624	3	127,100,2471,	0,477,15410,
#Partially deleted in new
chr19	43607218	43619874	chr19:43607218-43619874	3	-	43607616	43614304	789624	3	889,206,317,	0,7010,12339,
#Deleted in new
chr19	43612106	43614487	chr19:43612106-43614487	1	+	43612121	43614269	789624	1	2381,	0,
#Partially deleted in new
chr19	43613936	43619628	chr19:43613936-43619628	0	-	43613936	43613936	8553170	2	498,71,	0,5621,
#Partially deleted in new
chr19	43622367	43639839	chr19:43622367-43639839	3	-	43623329	43639790	789624	9	1072,129,173,91,165,135,153,147,113,	0,1746,2710,3543,3756,4416,4798,5276,17359,
#Partially deleted in new
chr19	43624835	43625971	chr19:43624835-43625971	0	-	43624835	43624835	8553170	3	68,173,61,	0,242,1075,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	43646094	43670166	chr19:43646094-43670166	1	-	43646456	43670120	0	7	454,147,135,162,144,111,101,	0,6130,9344,10384,19221,21486,23971,
#Partially deleted in new
chr19	43648575	43656616	chr19:43648575-43656616	0	-	43648889	43656616	789624	4	334,108,135,138,	0,3688,6863,7903,
#Partially deleted in new
chr19	43648578	43670153	chr19:43648578-43670153	1	-	43648889	43670120	789624	6	565,135,162,144,111,88,	0,6860,7900,16737,19002,21487,
#Partially deleted in new
chr19	43648579	43670547	chr19:43648579-43670547	1	-	43648889	43670120	0	6	564,147,162,144,111,482,	0,3645,7899,16736,19001,21486,
#Partially deleted in new
chr19	43648579	43670350	chr19:43648579-43670350	3	-	43648889	43670120	0	7	564,147,135,162,144,111,285,	0,3645,6859,7899,16736,19001,21486,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	43651823	43656573	chr19:43651823-43656573	0	-	43651967	43656573	789624	4	230,147,135,95,	0,401,3615,4655,
#Partially deleted in new
chr19	43652040	43656802	chr19:43652040-43656802	0	-	43652040	43652040	8553170	2	331,324,	0,4438,
#Partially deleted in new
chr19	43652224	43667691	chr19:43652224-43667691	0	-	43652224	43667691	789624	4	147,135,162,111,	0,3214,4254,15356,
#Partially deleted in new
chr19	43652225	43668320	chr19:43652225-43668320	0	-	43652225	43667671	789624	6	146,135,162,144,111,44,	0,3213,4253,13090,15355,16051,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	43655438	43670141	chr19:43655438-43670141	0	-	43661356	43670120	789624	4	135,162,469,76,	0,1040,5535,14627,
#Partially deleted in new
chr19	43655512	43668244	chr19:43655512-43668244	0	-	43655512	43667671	789624	5	61,162,144,111,201,	0,966,9803,12068,12531,
#Partially deleted in new
chr19	43656478	43668256	chr19:43656478-43668256	0	-	43656478	43667816	789624	4	162,144,111,480,	0,8837,11102,11298,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	43656565	43661548	chr19:43656565-43661548	0	-	43656565	43656565	8553170	2	75,575,	0,4408,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	43660499	43660776	chr19:43660499-43660776	3	-	43660499	43660499	8553170	1	277,	0,
#Partially deleted in new
chr19	43665109	43670167	chr19:43665109-43670167	0	-	43665109	43665109	8553170	3	350,111,102,	0,2471,4956,
#Partially deleted in new
chr19	43665356	43668304	chr19:43665356-43668304	0	-	43665356	43667800	789624	3	103,111,526,	0,2224,2422,
#Partially deleted in new
chr19	43667214	43670168	chr19:43667214-43670168	0	-	43667214	43667214	8553170	2	477,103,	0,2851,
#Partially deleted in new
chr19	43690001	43700508	chr19:43690001-43700508	7	+	43690001	43690001	16724991	6	160,138,132,165,147,961,	0,2280,5048,7351,7784,9546,
#Partially deleted in new
chr19	43692281	43700508	chr19:43692281-43700508	5	+	43692281	43692281	16724991	5	138,132,165,147,961,	0,2768,5071,5504,7266,
#Partially deleted in new
chr19	43716009	43720021	chr19:43716009-43720021	3	+	43718558	43719950	789624	2	133,1529,	0,2483,
#Partially deleted in new
chr19	43716109	43719272	chr19:43716109-43719272	0	+	43718447	43719272	789624	2	33,893,	0,2270,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	43727991	43754990	chr19:43727991-43754990	3	-	43731595	43750741	789624	14	3683,145,129,108,107,86,96,112,113,98,265,75,156,337,	0,4866,5332,5634,6397,9605,10130,12115,16780,19450,19641,19986,22600,26662,
#Deleted in new
chr19	43731389	43733110	chr19:43731389-43733110	0	-	43731389	43731389	8553170	2	285,253,	0,1468,
#Partially deleted in new
chr19	43732269	43754962	chr19:43732269-43754962	1	-	43732853	43750741	789624	13	733,129,108,107,86,96,112,113,98,265,75,156,309,	0,1054,1356,2119,5327,5852,7837,12502,15172,15363,15708,18322,22384,
#Deleted in new
chr19	43733343	43734079	chr19:43733343-43734079	0	-	43733343	43733343	8553170	2	109,454,	0,282,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	43733423	43734825	chr19:43733423-43734825	0	-	43733423	43733423	8553170	3	29,108,437,	0,202,965,
#Partially deleted in new
chr19	43734459	43747734	chr19:43734459-43747734	0	-	43740058	43747734	789624	7	36,86,96,546,113,98,102,	0,3137,3662,5213,10312,12982,13173,
#Partially deleted in new
chr19	43737849	43754867	chr19:43737849-43754867	0	-	43737849	43737849	8553170	8	368,112,113,98,265,75,156,214,	0,2257,6922,9592,9783,10128,12742,16804,
#Partially deleted in new
chr19	43747478	43754634	chr19:43747478-43754634	0	-	43747478	43750741	789624	5	61,265,75,156,93,	0,154,499,3113,7063,
#Partially deleted in new
chr19	43747654	43754598	chr19:43747654-43754598	0	-	43747654	43750741	789624	4	243,75,156,223,	0,323,2937,6721,
#Partially deleted in new
chr19	43747676	43754627	chr19:43747676-43754627	0	-	43747676	43750741	789624	4	221,75,156,98,	0,301,2915,6853,
#Partially deleted in new
chr19	43747761	43754634	chr19:43747761-43754634	0	-	43747761	43750741	789624	4	136,75,156,71,	0,216,2830,6802,
#Partially deleted in new
chr19	43747776	43754601	chr19:43747776-43754601	0	-	43747776	43750741	789624	4	121,75,156,224,	0,201,2815,6601,
#Partially deleted in new
chr19	43747796	43754922	chr19:43747796-43754922	0	-	43747796	43747796	8553170	3	256,156,269,	0,2795,6857,
#Partially deleted in new
chr19	43766532	43781261	chr19:43766532-43781261	3	-	43767542	43780861	0	9	557,168,70,119,111,136,428,96,559,	0,1007,2430,2909,3186,5467,7659,10008,14170,
#Deleted in new
chr19	43766532	43768977	chr19:43766532-43768977	0	-	43767542	43768977	789624	2	1175,15,	0,2430,
#Partially deleted in new
chr19	43766532	43781257	chr19:43766532-43781257	1	-	43767542	43776610	789624	10	557,168,70,119,111,136,158,59,96,555,	0,1007,2430,2909,3186,5467,7659,8028,10008,14170,
#Partially deleted in new
chr19	43766532	43780973	chr19:43766532-43780973	1	-	43767542	43780861	8553170	9	557,168,70,119,111,136,428,96,271,	0,1007,2430,2909,3186,5467,7659,10008,14170,
#Partially deleted in new
chr19	43766538	43773900	chr19:43766538-43773900	0	-	43766538	43766538	8553170	7	551,168,70,119,111,136,115,	0,1001,2424,2903,3180,5461,7247,
#Deleted in new
chr19	43766585	43769827	chr19:43766585-43769827	0	-	43767542	43769827	789624	5	504,168,70,152,109,	0,954,2377,2761,3133,
#Deleted in new
chr19	43766821	43769157	chr19:43766821-43769157	0	-	43766821	43766821	8553170	3	268,168,195,	0,718,2141,
#Partially deleted in new
chr19	43766952	43780976	chr19:43766952-43780976	0	-	43772088	43780861	789624	7	137,168,70,119,111,104,274,	0,587,2010,2489,2766,5047,13750,
#Partially deleted in new
chr19	43767451	43774496	chr19:43767451-43774496	0	-	43767451	43767451	8553170	5	256,598,111,136,305,	0,1511,2267,4548,6740,
#Partially deleted in new
chr19	43767576	43772107	chr19:43767576-43772107	0	-	43769437	43772107	789624	5	131,70,228,111,108,	0,1386,1756,2142,4423,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	43774218	43776826	chr19:43774218-43776826	0	-	43774218	43774218	8553170	2	401,286,	0,2322,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	43794308	43795658	chr19:43794308-43795658	3	-	43794308	43794308	8553170	2	309,247,	0,1103,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	43795928	43802461	chr19:43795928-43802461	1	-	43797590	43802380	789624	5	1901,147,177,129,145,	0,2526,2883,3777,6388,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	43796240	43820634	chr19:43796240-43820634	3	-	43797590	43799769	789624	5	1589,147,177,129,95,	0,2214,2571,3465,24299,
#Partially deleted in new
chr19	43796958	43800029	chr19:43796958-43800029	1	-	43797590	43799769	789624	4	871,147,177,324,	0,1496,1853,2747,
#Deleted in new
chr19	43797495	43798696	chr19:43797495-43798696	0	-	43797495	43797495	8553170	2	334,242,	0,959,
#Deleted in new
chr19	43797681	43799067	chr19:43797681-43799067	0	-	43797681	43797681	8553170	3	148,147,256,	0,773,1130,
#Partially deleted in new
chr19	43798459	43820598	chr19:43798459-43820598	0	-	43798459	43799769	789624	4	142,177,129,121,	0,352,1246,22018,
#Partially deleted in new
chr19	43798501	43827199	chr19:43798501-43827199	0	-	43798501	43799769	789624	4	100,177,129,201,	0,310,1204,28497,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	43822056	43827206	chr19:43822056-43827206	0	-	43822056	43822056	8553170	2	1858,208,	0,4942,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	43827291	43852017	chr19:43827291-43852017	3	+	43833504	43848641	789624	7	153,80,64,122,88,127,5079,	0,910,4026,6213,8213,9761,19647,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	43827354	43833852	chr19:43827354-43833852	0	+	43827354	43827354	8553170	4	90,80,64,348,	0,847,3963,6150,
#Partially deleted in new
chr19	43827373	43848898	chr19:43827373-43848898	1	+	43847018	43848641	789624	6	71,165,80,64,88,1960,	0,402,828,3944,8131,19565,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	43827423	43841018	chr19:43827423-43841018	1	+	43831334	43840910	789624	6	21,80,64,88,80,133,	0,778,3894,8081,9629,13462,
#Partially deleted in new
chr19	43828198	43837179	chr19:43828198-43837179	0	+	43835583	43837179	789624	3	83,88,127,	0,7306,8854,
#Partially deleted in new
chr19	43828201	43838080	chr19:43828201-43838080	1	+	43831334	43837202	789624	4	80,64,88,1028,	0,3116,7303,8851,
#Partially deleted in new
chr19	43872362	43883964	chr19:43872362-43883964	3	-	43872554	43883964	789624	3	1715,127,9,	0,7647,11593,
#Partially deleted in new
chr19	43872366	43880142	chr19:43872366-43880142	1	-	43872554	43880142	789624	2	1711,133,	0,7643,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	43881639	43901385	chr19:43881639-43901385	0	-	43881639	43881639	8553170	4	99,96,87,349,	0,2316,19228,19397,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	43891232	43895411	chr19:43891232-43895411	3	+	43891232	43891232	8553170	1	4179,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	43891803	43901805	chr19:43891803-43901805	3	-	43891803	43891803	789624	3	1337,87,769,	0,9064,9233,
#Deleted in new
chr19	43900917	43901511	chr19:43900917-43901511	0	-	43900917	43900917	8553170	2	37,467,	0,127,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	43902000	43926545	chr19:43902000-43926545	3	+	43902000	43902000	8553170	3	144,113,260,	0,23141,24285,
#Partially deleted in new
chr19	43912628	43935259	chr19:43912628-43935259	3	-	43913386	43922185	789624	10	2572,93,127,47,73,160,134,87,269,336,	0,6241,6944,9542,11609,11773,12696,19975,21797,22295,
#Partially deleted in new
chr19	43912630	43924312	chr19:43912630-43924312	1	-	43913386	43922185	789624	5	2570,93,127,47,75,	0,6239,6942,9540,11607,
#Partially deleted in new
chr19	43913128	43922287	chr19:43913128-43922287	1	-	43913386	43922185	789624	4	2072,93,127,117,	0,5741,6444,9042,
#Partially deleted in new
chr19	43914940	43919739	chr19:43914940-43919739	0	-	43914940	43919606	789624	3	260,93,167,	0,3929,4632,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	43929956	43935278	chr19:43929956-43935278	0	-	43929956	43929956	8553170	5	44,119,87,269,49,	0,1290,2647,4469,5273,
#Partially deleted in new
chr19	43932402	43934542	chr19:43932402-43934542	0	-	43932402	43932402	8553170	2	288,117,	0,2023,
#Partially deleted in new
chr19	43951222	43967356	chr19:43951222-43967356	1	+	43962726	43967356	789624	5	178,83,127,93,1553,	0,11502,13727,14010,14581,
#Partially deleted in new
chr19	43951222	43965893	chr19:43951222-43965893	0	+	43962726	43965893	8553170	5	188,83,127,93,90,	0,11502,13727,14010,14581,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	43951244	43967709	chr19:43951244-43967709	3	+	43962726	43967356	789624	6	156,170,83,127,93,1906,	0,8942,11480,13705,13988,14559,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	43960275	43967600	chr19:43960275-43967600	1	+	43962726	43967356	789624	6	81,148,83,127,93,1797,	0,1548,2449,4674,4957,5528,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	43962722	43967600	chr19:43962722-43967600	1	+	43962726	43967356	789624	4	85,127,93,1797,	0,2227,2510,3081,
#Partially deleted in new
chr19	43967861	43996129	chr19:43967861-43996129	0	+	43988543	43996129	789624	5	223,100,127,93,37,	0,20597,23686,23980,28231,
#Deleted in new
chr19	43976814	43977448	chr19:43976814-43977448	3	+	43976814	43976814	8553170	1	634,	0,
#Deleted in new
chr19	43978375	43978663	chr19:43978375-43978663	3	+	43978375	43978375	8553170	1	288,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	43984169	43998325	chr19:43984169-43998325	3	+	43988543	43997474	789624	5	179,100,127,93,2233,	0,4289,7378,7672,11923,
#Partially deleted in new
chr19	43984187	43988968	chr19:43984187-43988968	0	+	43984187	43984187	8553170	2	58,510,	0,4271,
#Partially deleted in new
chr19	43984190	43996307	chr19:43984190-43996307	0	+	43988543	43996307	789624	5	41,100,127,93,215,	0,4268,7357,7651,11902,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	43984193	43997853	chr19:43984193-43997853	1	+	43990064	43997474	789624	6	52,100,89,127,93,1761,	0,4265,5830,7354,7648,11899,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	43984202	43998325	chr19:43984202-43998325	1	+	43988543	43997474	789624	5	43,100,127,93,2233,	0,4256,7345,7639,11890,
#Partially deleted in new
chr19	43984216	43997554	chr19:43984216-43997554	1	+	43988543	43997474	789624	5	106,100,127,93,1462,	0,4242,7331,7625,11876,
#Partially deleted in new
chr19	43984218	43988943	chr19:43984218-43988943	0	+	43984218	43984218	8553170	2	104,485,	0,4240,
#Partially deleted in new
chr19	43984220	43996203	chr19:43984220-43996203	0	+	43988543	43996203	789624	5	128,100,127,93,111,	0,4238,7327,7621,11872,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	43996895	44002836	chr19:43996895-44002836	3	-	43996895	43996895	8553170	2	2337,213,	0,5728,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	43996898	44002833	chr19:43996898-44002833	1	-	43996898	43996898	789624	3	897,710,569,	0,1624,5366,
#Partially deleted in new
chr19	44002947	44013926	chr19:44002947-44013926	3	+	44007078	44011464	789624	5	160,83,127,87,3658,	0,4063,5842,6136,7321,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	44002958	44004752	chr19:44002958-44004752	0	+	44002958	44002958	8553170	1	1794,	0,
#Partially deleted in new
chr19	44002975	44013849	chr19:44002975-44013849	0	+	44007078	44008939	789624	5	132,83,202,87,3581,	0,4035,5814,6108,7293,
#Partially deleted in new
chr19	44002977	44009322	chr19:44002977-44009322	1	+	44007078	44009205	789624	4	130,83,127,239,	0,4033,5812,6106,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	44006699	44009162	chr19:44006699-44009162	0	+	44007078	44009162	789624	3	394,127,79,	0,2090,2384,
#Partially deleted in new
chr19	44023603	44025262	chr19:44023603-44025262	3	-	44023603	44023603	8553170	3	296,122,148,	0,1294,1511,
#Partially deleted in new
chr19	44025341	44028386	chr19:44025341-44028386	1	+	44025436	44028217	789624	4	137,127,93,180,	0,1681,2056,2865,
#Partially deleted in new
chr19	44025353	44031048	chr19:44025353-44031048	0	+	44025353	44025353	8553170	5	125,61,127,93,109,	0,672,1669,2044,5586,
#Partially deleted in new
chr19	44025353	44087318	chr19:44025353-44087318	3	+	44025436	44076343	789624	11	125,127,93,83,127,93,1210,83,127,93,1605,	0,1669,2044,29755,35101,35395,40710,50968,55661,56659,60360,
#Partially deleted in new
chr19	44025362	44033110	chr19:44025362-44033110	3	+	44026071	44033030	789624	4	116,61,127,1294,	0,663,1660,6454,
#Partially deleted in new
chr19	44025399	44033112	chr19:44025399-44033112	1	+	44025436	44033030	789624	4	79,127,93,1296,	0,1623,1998,6417,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	44051366	44060788	chr19:44051366-44060788	0	+	44051366	44051366	8553170	3	435,83,40,	0,3742,9382,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	44052008	44067991	chr19:44052008-44067991	3	+	44055176	44067277	789624	5	187,83,127,93,1928,	0,3100,8446,8740,14055,
#Partially deleted in new
chr19	44052040	44060924	chr19:44052040-44060924	1	+	44055176	44060876	789624	4	155,83,127,176,	0,3068,8414,8708,
#Partially deleted in new
chr19	44060363	44066602	chr19:44060363-44066602	0	+	44060547	44066602	789624	3	218,93,539,	0,385,5700,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	44072143	44089613	chr19:44072143-44089613	3	+	44076389	44087260	789624	5	148,83,127,93,3900,	0,4178,8871,9869,13570,
#Deleted in new
chr19	44085212	44085303	chr19:44085212-44085303	3	-	44085212	44085212	8553170	1	91,	0,
#Partially deleted in new
chr19	44094338	44101188	chr19:44094338-44101188	0	+	44097873	44101188	789624	5	192,89,83,127,56,	0,2004,3467,6462,6794,
#Partially deleted in new
chr19	44094386	44101088	chr19:44094386-44101088	0	+	44094386	44094386	8553170	4	102,89,83,288,	0,1956,3419,6414,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	44094389	44095941	chr19:44094389-44095941	0	+	44094389	44094389	8553170	1	1552,	0,
#Partially deleted in new
chr19	44094391	44109886	chr19:44094391-44109886	3	+	44097873	44108284	0	6	97,89,83,127,93,3491,	0,1951,3414,6409,6741,12004,
#Partially deleted in new
chr19	44094784	44097852	chr19:44094784-44097852	0	+	44094784	44094784	8553170	3	374,89,47,	0,1558,3021,
#Partially deleted in new
chr19	44096045	44101150	chr19:44096045-44101150	0	+	44097873	44101150	789624	4	386,83,127,18,	0,1760,4755,5087,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	44097708	44106533	chr19:44097708-44106533	0	+	44097873	44106533	789624	4	180,127,93,138,	0,3092,3424,8687,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	44105332	44108326	chr19:44105332-44108326	0	+	44105332	44105332	8553170	1	2994,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	44105462	44113145	chr19:44105462-44113145	3	-	44105462	44105462	789624	2	2875,324,	0,7359,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	44111950	44112956	chr19:44111950-44112956	0	-	44111950	44111950	8553170	2	289,135,	0,871,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	44112180	44130981	chr19:44112180-44130981	0	+	44115827	44130981	789624	5	117,83,127,93,132,	0,3579,6007,6301,18669,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	44113357	44134816	chr19:44113357-44134816	3	+	44115827	44132735	789624	5	212,83,127,93,3967,	0,2402,4830,5124,17492,
#Partially deleted in new
chr19	44113414	44118492	chr19:44113414-44118492	0	+	44115827	44118492	789624	5	155,165,83,127,11,	0,634,2345,4773,5067,
#Partially deleted in new
chr19	44113416	44132874	chr19:44113416-44132874	1	+	44115827	44129082	789624	6	153,83,127,93,57,2025,	0,2343,4771,5065,15625,17433,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	44115544	44132735	chr19:44115544-44132735	1	+	44115827	44132735	789624	4	298,127,93,1886,	0,2643,2937,15305,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	44128453	44130700	chr19:44128453-44130700	0	+	44128453	44128453	8553170	1	2247,	0,
#Partially deleted in new
chr19	44141556	44158119	chr19:44141556-44158119	1	+	44144632	44158119	789624	6	59,54,91,127,93,1868,	0,757,3000,7214,8856,14695,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	44141605	44160309	chr19:44141605-44160309	3	+	44144632	44158119	789624	6	128,54,91,127,93,4058,	0,708,2951,7165,8807,14646,
#Partially deleted in new
chr19	44141909	44148811	chr19:44141909-44148811	0	+	44141909	44141909	8553170	2	458,41,	0,6861,
#Partially deleted in new
chr19	44165072	44175643	chr19:44165072-44175643	0	+	44170080	44175643	789624	6	70,51,61,127,93,146,	0,684,4962,7015,7787,10425,
#Partially deleted in new
chr19	44165083	44173191	chr19:44165083-44173191	1	+	44170080	44172987	789624	6	59,26,51,61,127,332,	0,504,673,4951,7004,7776,
#Partially deleted in new
chr19	44165095	44177683	chr19:44165095-44177683	3	+	44170080	44177674	789624	6	47,51,61,127,93,2186,	0,661,4939,6992,7764,10402,
#Partially deleted in new
chr19	44165096	44172934	chr19:44165096-44172934	0	+	44170080	44172934	789624	5	46,220,56,127,75,	0,491,4943,6991,7763,
#Partially deleted in new
chr19	44165100	44172915	chr19:44165100-44172915	0	+	44170080	44172915	789624	6	42,51,178,61,127,56,	0,656,1604,4934,6987,7759,
#Partially deleted in new
chr19	44165100	44175530	chr19:44165100-44175530	0	+	44170080	44175530	789624	6	42,220,61,127,93,33,	0,487,4934,6987,7759,10397,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	44165100	44178381	chr19:44165100-44178381	1	+	44170080	44172987	789624	5	42,220,61,127,5522,	0,487,4934,6987,7759,
#Partially deleted in new
chr19	44165102	44175158	chr19:44165102-44175158	1	+	44170080	44175033	789624	6	40,220,61,127,93,175,	0,485,4932,6985,7757,9881,
#Partially deleted in new
chr19	44165103	44175429	chr19:44165103-44175429	1	+	44170080	44175033	789624	6	39,51,61,127,93,446,	0,653,4931,6984,7756,9880,
#Partially deleted in new
chr19	44165103	44175033	chr19:44165103-44175033	1	+	44170080	44175033	789624	7	39,26,51,61,127,93,50,	0,484,653,4931,6984,7756,9880,
#Partially deleted in new
chr19	44165106	44175712	chr19:44165106-44175712	0	+	44172180	44175712	789624	6	36,51,61,123,93,215,	0,650,4928,6985,7753,10391,
#Partially deleted in new
chr19	44165108	44172154	chr19:44165108-44172154	0	+	44170080	44172154	789624	5	34,220,178,61,67,	0,479,1596,4926,6979,
#Partially deleted in new
chr19	44165111	44172899	chr19:44165111-44172899	0	+	44170080	44172899	789624	7	31,51,178,42,61,127,40,	0,645,1593,2707,4923,6976,7748,
#Partially deleted in new
chr19	44165115	44175679	chr19:44165115-44175679	0	+	44170080	44175679	789624	7	27,26,51,61,127,93,182,	0,472,641,4919,6972,7744,10382,
#Partially deleted in new
chr19	44165115	44173234	chr19:44165115-44173234	1	+	44170080	44172987	789624	5	27,51,61,127,375,	0,641,4919,6972,7744,
#Partially deleted in new
chr19	44165154	44177683	chr19:44165154-44177683	1	+	44170080	44177674	789624	7	92,51,178,61,127,93,2186,	0,602,1550,4880,6933,7705,10343,
#Partially deleted in new
chr19	44165163	44177687	chr19:44165163-44177687	1	+	44170080	44177674	789624	6	83,51,61,127,93,2190,	0,593,4871,6924,7696,10334,
#Partially deleted in new
chr19	44165755	44175721	chr19:44165755-44175721	0	+	44170080	44175721	789624	6	52,64,56,127,93,224,	0,3809,4284,6332,7104,9742,
#Partially deleted in new
chr19	44170032	44172758	chr19:44170032-44172758	0	+	44170032	44170032	8553170	2	63,671,	0,2055,
#Partially deleted in new
chr19	44207546	44213237	chr19:44207546-44213237	0	+	44207546	44207546	8553170	2	337,148,	0,5543,
#Partially deleted in new
chr19	44212527	44237267	chr19:44212527-44237267	1	+	44228538	44236830	789624	5	58,158,127,84,2566,	0,559,15918,17205,22174,
#Partially deleted in new
chr19	44212527	44237267	chr19:44212527-44237267	3	+	44217792	44236830	789624	6	58,158,62,127,84,2566,	0,559,5263,15918,17205,22174,
#Partially deleted in new
chr19	44212537	44237268	chr19:44212537-44237268	1	+	44217792	44236830	789624	6	48,155,62,127,84,2567,	0,552,5253,15908,17195,22164,
#Partially deleted in new
chr19	44212537	44234835	chr19:44212537-44234835	1	+	44217792	44234720	789624	6	48,155,62,86,84,134,	0,552,5253,15949,17195,22164,
#Partially deleted in new
chr19	44212537	44234955	chr19:44212537-44234955	0	+	44228538	44234955	789624	4	48,155,127,254,	0,552,15908,22164,
#Deleted in new
chr19	44212537	44213754	chr19:44212537-44213754	0	+	44212537	44212537	8553170	2	48,665,	0,552,
#Partially deleted in new
chr19	44212564	44234841	chr19:44212564-44234841	1	+	44228538	44234720	789624	4	21,155,188,140,	0,525,15881,22137,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	44212567	44229118	chr19:44212567-44229118	0	+	44212567	44212567	8553170	3	18,155,673,	0,522,15878,
#Partially deleted in new
chr19	44212570	44235159	chr19:44212570-44235159	0	+	44217792	44235159	789624	5	15,176,62,127,458,	0,498,5220,15875,22131,
#Partially deleted in new
chr19	44212574	44237267	chr19:44212574-44237267	1	+	44228538	44236830	789624	5	11,155,127,84,2566,	0,515,15871,17158,22127,
#Partially deleted in new
chr19	44212622	44229792	chr19:44212622-44229792	0	+	44217792	44229792	789624	5	141,155,62,127,60,	0,467,5168,15823,17110,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	44227124	44228573	chr19:44227124-44228573	0	+	44227124	44227124	8553170	2	216,373,	0,1076,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	44228728	44303432	chr19:44228728-44303432	0	-	44234861	44303404	789624	5	235,115,96,127,43,	0,6026,70079,70877,74661,
#Partially deleted in new
chr19	44236109	44305019	chr19:44236109-44305019	1	-	44236715	44303404	789624	5	620,96,127,63,49,	0,62698,63496,67280,68861,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	44246477	44248374	chr19:44246477-44248374	3	-	44246477	44246477	8553170	1	1897,	0,
#Partially deleted in new
chr19	44259879	44275309	chr19:44259879-44275309	1	+	44264360	44272900	789624	5	59,62,127,279,2411,	0,4434,6318,6986,13019,
#Partially deleted in new
chr19	44259885	44273148	chr19:44259885-44273148	0	+	44264360	44273148	789624	5	53,48,127,96,250,	0,4442,6312,6980,13013,
#Partially deleted in new
chr19	44259904	44266900	chr19:44259904-44266900	0	+	44260084	44266900	789624	4	304,62,127,35,	0,4409,6293,6961,
#Partially deleted in new
chr19	44259922	44275317	chr19:44259922-44275317	3	+	44264360	44274673	789624	5	80,62,127,96,2419,	0,4391,6275,6943,12976,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	44264312	44268213	chr19:44264312-44268213	1	+	44264360	44267393	789624	4	63,127,96,834,	0,1885,2553,3067,
#Partially deleted in new
chr19	44274751	44305046	chr19:44274751-44305046	1	-	44274895	44303404	789624	5	170,96,127,63,76,	0,24056,24854,28638,30219,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	44286347	44290566	chr19:44286347-44290566	0	-	44286347	44286347	8553170	1	4219,	0,
#Partially deleted in new
chr19	44286349	44305025	chr19:44286349-44305025	3	-	44287217	44303404	789624	5	2847,96,127,63,55,	0,12458,13256,17040,18621,
#Partially deleted in new
chr19	44286363	44305025	chr19:44286363-44305025	1	-	44287217	44303404	8553170	5	2833,84,127,63,55,	0,12456,13242,17026,18607,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	44288804	44304968	chr19:44288804-44304968	0	-	44288804	44304907	789624	5	392,96,127,63,268,	0,10003,10801,14585,15896,
#Partially deleted in new
chr19	44290080	44290911	chr19:44290080-44290911	7	+	44290080	44290080	16724991	2	253,273,	0,558,
#Deleted in new
chr19	44297103	44297355	chr19:44297103-44297355	7	+	44297103	44297103	16724991	1	252,	0,
#Partially deleted in new
chr19	44326554	44356674	chr19:44326554-44356674	3	-	44327432	44340539	789624	4	3382,96,127,49,	0,10068,13861,30071,
#Partially deleted in new
chr19	44326942	44356680	chr19:44326942-44356680	1	-	44327432	44343268	789624	5	2994,96,127,49,55,	0,9680,13473,16311,29683,
#Partially deleted in new
chr19	44329520	44356682	chr19:44329520-44356682	0	-	44329520	44336659	789624	3	416,96,57,	0,7102,27105,
#Partially deleted in new
chr19	44329694	44401608	chr19:44329694-44401608	3	-	44329694	44397213	789624	5	242,96,124,58,41,	0,6928,10721,67504,71873,
#Partially deleted in new
chr19	44329707	44367205	chr19:44329707-44367205	0	-	44329707	44340539	789624	4	229,96,127,125,	0,6915,10708,37373,
#Partially deleted in new
chr19	44329719	44356674	chr19:44329719-44356674	0	-	44336691	44343268	789624	5	217,96,123,49,49,	0,6903,10700,13534,26906,
#Partially deleted in new
chr19	44329787	44367217	chr19:44329787-44367217	0	-	44329787	44367097	789624	5	149,96,127,49,137,	0,6835,10628,13466,37293,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	44382297	44401589	chr19:44382297-44401589	3	-	44386471	44397213	789624	4	5805,127,58,22,	0,10042,14901,19270,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	44385648	44401576	chr19:44385648-44401576	1	-	44386471	44397213	789624	4	2454,127,58,154,	0,6691,11550,15774,
#Partially deleted in new
chr19	44385928	44401575	chr19:44385928-44401575	1	-	44386471	44397213	789624	5	2174,127,21,58,8,	0,6411,8591,11270,15639,
#Partially deleted in new
chr19	44387661	44401608	chr19:44387661-44401608	0	-	44387661	44387779	789624	3	441,58,41,	0,9537,13906,
#Partially deleted in new
chr19	44387921	44401601	chr19:44387921-44401601	0	-	44392331	44397213	789624	5	181,261,21,58,34,	0,4284,6598,9277,13646,
#Partially deleted in new
chr19	44392438	44448452	chr19:44392438-44448452	3	-	44392438	44392438	8553170	6	28,58,59,197,88,144,	0,4760,50124,50389,55074,55870,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	44396663	44401601	chr19:44396663-44401601	0	-	44396663	44396663	8553170	2	593,34,	0,4904,
#Partially deleted in new
chr19	44417518	44448472	chr19:44417518-44448472	0	-	44417518	44417518	8553170	5	28,59,211,88,164,	0,25044,25295,29994,30790,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	44426250	44448578	chr19:44426250-44448578	1	-	44428302	44442847	789624	6	4292,127,59,211,88,58,	0,5989,16312,16563,21262,22270,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	44426254	44448446	chr19:44426254-44448446	0	-	44432207	44442847	789624	6	4288,600,59,211,88,138,	0,5512,16308,16559,21258,22054,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	44426707	44448477	chr19:44426707-44448477	3	-	44428302	44442847	789624	6	3835,145,59,211,88,169,	0,5514,15855,16106,20805,21601,
#Partially deleted in new
chr19	44432338	44448461	chr19:44432338-44448461	0	-	44432338	44442571	789624	5	28,59,197,88,153,	0,10224,10489,15174,15970,
#Partially deleted in new
chr19	44467640	44473227	chr19:44467640-44473227	7	+	44467640	44467640	16724991	2	142,1625,	0,3962,
#Partially deleted in new
chr19	44474427	44500522	chr19:44474427-44500522	3	-	44476401	44500240	789624	5	3719,127,75,89,325,	0,4855,9933,22856,25770,
#Partially deleted in new
chr19	44475636	44500520	chr19:44475636-44500520	1	-	44476401	44500240	789624	4	2510,127,89,323,	0,3646,21647,24561,
#Partially deleted in new
chr19	44475638	44500524	chr19:44475638-44500524	0	-	44484374	44500240	789624	5	2508,127,75,94,327,	0,3644,8722,21645,24559,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	44475638	44500495	chr19:44475638-44500495	0	-	44496563	44497334	789624	7	2508,127,75,127,118,94,221,	0,3644,8722,9011,20909,21645,24636,
#Partially deleted in new
chr19	44475643	44500523	chr19:44475643-44500523	1	-	44476401	44497334	789624	5	2503,127,75,94,249,	0,3639,8717,21640,24631,
#Partially deleted in new
chr19	44477848	44500522	chr19:44477848-44500522	0	-	44477848	44497334	789624	5	298,127,75,89,248,	0,1434,6512,19435,22426,
#Partially deleted in new
chr19	44478103	44500510	chr19:44478103-44500510	1	-	44484374	44500240	789624	4	43,75,94,313,	0,6257,19180,22094,
#Partially deleted in new
chr19	44479409	44500522	chr19:44479409-44500522	0	-	44479409	44479409	8553170	4	70,75,94,325,	0,4951,17874,20788,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	44496547	44500523	chr19:44496547-44500523	0	-	44496547	44496547	8553170	3	118,94,326,	0,736,3650,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	44496547	44500519	chr19:44496547-44500519	0	-	44496547	44496547	8553170	3	122,89,322,	0,736,3650,
#Partially deleted in new
chr19	44501676	44529788	chr19:44501676-44529788	1	-	44501758	44529509	789624	12	103,126,36,62,86,118,279,279,279,276,144,331,	0,9353,9960,10340,11191,11495,15269,18797,20957,22309,23424,27781,
#Partially deleted in new
chr19	44506158	44529525	chr19:44506158-44529525	1	-	44506160	44529509	789624	11	56,126,62,86,118,279,279,279,276,144,68,	0,4871,5858,6709,7013,10787,14315,16475,17827,18942,23299,
#Partially deleted in new
chr19	44506158	44529525	chr19:44506158-44529525	1	-	44506160	44529509	789624	11	56,126,36,62,86,118,279,279,276,144,68,	0,4871,5478,5858,6709,7013,14315,16475,17827,18942,23299,
#Partially deleted in new
chr19	44506158	44529525	chr19:44506158-44529525	3	-	44506160	44529509	789624	12	56,126,36,62,86,118,279,279,279,276,144,68,	0,4871,5478,5858,6709,7013,10787,14315,16475,17827,18942,23299,
#Partially deleted in new
chr19	44506158	44529525	chr19:44506158-44529525	1	-	44506160	44529509	789624	10	56,126,62,86,118,279,279,276,144,68,	0,4871,5858,6709,7013,14315,16475,17827,18942,23299,
#Partially deleted in new
chr19	44511009	44529788	chr19:44511009-44529788	1	-	44511009	44529509	789624	12	15,129,36,62,86,118,279,279,279,276,144,331,	0,17,627,1007,1858,2162,5936,9464,11624,12976,14091,18448,
#Deleted in new
chr19	44536262	44536613	chr19:44536262-44536613	3	-	44536262	44536262	8553170	2	218,23,	0,328,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	44537057	44556917	chr19:44537057-44556917	5	-	44537057	44537057	16724991	8	1456,130,143,255,279,255,182,316,	0,2109,3942,5703,6596,10121,11840,19544,
#Partially deleted in new
chr19	44542797	44549166	chr19:44542797-44549166	5	-	44542797	44542797	16724991	4	218,279,255,269,	0,856,4381,6100,
#Partially deleted in new
chr19	44547312	44620821	chr19:44547312-44620821	7	-	44547312	44547312	16724991	4	121,279,88,57,	0,1585,9289,73452,
#Deleted in new
chr19	44570303	44570564	chr19:44570303-44570564	7	-	44570303	44570303	16724991	1	261,	0,
#Partially deleted in new
chr19	44613629	44636781	chr19:44613629-44636781	3	+	44613645	44635434	789624	5	141,266,154,65,363,	0,10077,13790,21771,22789,
#Partially deleted in new
chr19	44613781	44623777	chr19:44613781-44623777	0	+	44613867	44623777	789624	2	210,75,	0,9921,
#Partially deleted in new
chr19	44613929	44636454	chr19:44613929-44636454	0	+	44613929	44635434	789624	6	62,117,270,154,65,36,	0,4146,9773,13490,21471,22489,
#Partially deleted in new
chr19	44623745	44635492	chr19:44623745-44635492	0	+	44623745	44635434	789624	3	227,154,92,	0,3674,11655,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	44643797	44663583	chr19:44643797-44663583	1	+	44644096	44661811	789624	7	378,348,297,118,149,32,1844,	0,3425,6011,10102,13964,17494,17942,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	44643797	44663583	chr19:44643797-44663583	3	+	44644096	44661811	789624	8	378,348,297,118,149,159,32,1844,	0,3425,6011,10102,13964,14944,17494,17942,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	44643909	44663583	chr19:44643909-44663583	1	+	44644096	44661811	789624	8	266,348,297,118,149,24,32,1844,	0,3313,5899,9990,13852,14832,17382,17830,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	44643913	44663583	chr19:44643913-44663583	0	+	44644096	44647355	789624	8	262,271,297,118,149,159,32,1844,	0,3386,5895,9986,13848,14828,17378,17826,
#Partially deleted in new
chr19	44644096	44659094	chr19:44644096-44659094	1	+	44644096	44658929	789624	6	79,348,297,118,149,353,	0,3126,5712,9803,13665,14645,
#Partially deleted in new
chr19	44650040	44661880	chr19:44650040-44661880	0	+	44650040	44661319	789624	4	65,118,32,141,	0,3859,11251,11699,
#Deleted in new
chr19	44653685	44653732	chr19:44653685-44653732	3	-	44653685	44653685	5263520	1	47,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	44662277	44672708	chr19:44662277-44672708	0	+	44671931	44672708	789624	4	121,133,241,113,	0,9026,9468,10318,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	44662277	44672708	chr19:44662277-44672708	0	+	44671931	44672708	789624	3	121,241,113,	0,9468,10318,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	44662277	44672708	chr19:44662277-44672708	0	+	44671931	44672708	789624	5	121,364,133,241,113,	0,4680,9026,9468,10318,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	44662277	44672708	chr19:44662277-44672708	0	+	44671931	44672708	789624	5	121,364,133,97,113,	0,4680,9026,9612,10318,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	44662277	44672704	chr19:44662277-44672704	0	+	44671931	44672704	789624	4	121,364,241,109,	0,4680,9468,10318,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	44664130	44666158	chr19:44664130-44666158	3	+	44664130	44664130	8553170	1	2028,	0,
#Partially deleted in new
chr19	44671451	44684359	chr19:44671451-44684359	1	+	44671931	44683490	789624	8	535,369,151,84,47,86,54,923,	0,1144,4819,7401,8836,9775,11115,11985,
#Partially deleted in new
chr19	44671721	44684359	chr19:44671721-44684359	3	+	44671931	44683490	789624	8	265,369,151,84,47,86,54,926,	0,874,4549,7131,8566,9505,10845,11712,
#Partially deleted in new
chr19	44672477	44684355	chr19:44672477-44684355	0	+	44672477	44672477	8553170	8	487,134,151,84,47,86,54,919,	0,1234,3793,6375,7810,8749,10089,10959,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	44677584	44684359	chr19:44677584-44684359	0	+	44677584	44677584	8553170	4	1352,47,86,1793,	0,2703,3642,4982,
#Partially deleted in new
chr19	44699150	44710714	chr19:44699150-44710714	3	+	44701456	44710506	789624	7	110,133,345,279,279,327,219,	0,2210,4198,4867,6439,8710,11345,
#Partially deleted in new
chr19	44701359	44710714	chr19:44701359-44710714	1	+	44701456	44710506	789624	6	134,345,279,279,327,219,	0,1989,2658,4230,6501,9136,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	44715563	44718685	chr19:44715563-44718685	1	-	44715563	44715563	8553170	2	520,232,	0,2890,
#Partially deleted in new
chr19	44716107	44718759	chr19:44716107-44718759	0	-	44716107	44716107	8553170	2	73,306,	0,2346,
#Partially deleted in new
chr19	44725983	44726058	chr19:44725983-44726058	3	-	44725983	44725983	8553170	1	75,	0,
#Partially deleted in new
chr19	44747704	44759486	chr19:44747704-44759486	0	+	44747704	44747704	8553170	8	424,154,109,205,89,78,596,59,	0,3522,8527,9312,9622,9941,10541,11723,
#Deleted in new
chr19	44747835	44749004	chr19:44747835-44749004	0	+	44747835	44747835	8553170	2	293,310,	0,859,
#Partially deleted in new
chr19	44748546	44760044	chr19:44748546-44760044	3	+	44748790	44759615	0	9	500,154,109,205,89,78,168,118,617,	0,2680,7685,8470,8780,9099,9699,10177,10881,
#Partially deleted in new
chr19	44751320	44759463	chr19:44751320-44759463	0	+	44751320	44759463	789624	8	60,109,205,89,78,228,118,36,	0,4911,5696,6006,6325,6925,7403,8107,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	44755148	44757168	chr19:44755148-44757168	0	+	44755148	44755148	8553170	3	326,109,152,	0,1083,1868,
#Deleted in new
chr19	44756144	44757364	chr19:44756144-44757364	0	+	44756144	44756144	8553170	3	196,205,38,	0,872,1182,
#Deleted in new
chr19	44757588	44759825	chr19:44757588-44759825	0	+	44757588	44757588	8553170	4	135,168,118,398,	0,657,1135,1839,
#Deleted in new
chr19	44757656	44758563	chr19:44757656-44758563	0	+	44757656	44757656	8553170	2	67,318,	0,589,
#Deleted in new
chr19	44758527	44759558	chr19:44758527-44759558	0	+	44758527	44758527	8553170	2	314,131,	0,900,
#Deleted in new
chr19	44758656	44758721	chr19:44758656-44758721	3	+	44758656	44758656	5263520	1	65,	0,
#Deleted in new
chr19	44764949	44765100	chr19:44764949-44765100	3	+	44764949	44764949	8553170	1	151,	0,
#Deleted in new
chr19	44765147	44765464	chr19:44765147-44765464	7	+	44765147	44765147	16724991	1	317,	0,
#Partially deleted in new
chr19	44777868	44800634	chr19:44777868-44800634	3	+	44777931	44800443	0	11	416,147,157,122,138,88,132,147,78,70,84,	0,3036,3338,4501,6395,12135,14514,15605,16335,22512,22682,
#Partially deleted in new
chr19	44777868	44800634	chr19:44777868-44800634	1	+	44777931	44800443	0	10	416,147,157,122,88,132,147,78,70,84,	0,3036,3338,4501,12135,14514,15605,16335,22512,22682,
#Partially deleted in new
chr19	44777889	44800652	chr19:44777889-44800652	1	+	44777931	44800443	0	11	395,147,157,122,138,88,132,147,78,70,102,	0,3015,3317,4480,6374,12114,14493,15584,16314,22491,22661,
#Partially deleted in new
chr19	44780925	44792426	chr19:44780925-44792426	0	+	44780925	44784405	789624	6	126,157,122,154,88,44,	0,281,1444,3338,9078,11457,
#Deleted in new
chr19	44803700	44804010	chr19:44803700-44804010	3	+	44803700	44803700	8553170	1	310,	0,
#Partially deleted in new
chr19	44809058	44821421	chr19:44809058-44821421	3	+	44809124	44820921	0	15	148,122,229,71,97,183,137,157,116,142,137,145,145,118,506,	0,2166,3104,3419,4191,4379,5093,5545,9463,9682,9997,10287,10523,11646,11857,
#Partially deleted in new
chr19	44809070	44821416	chr19:44809070-44821416	1	+	44809124	44819730	789624	14	136,122,229,71,97,183,137,157,116,142,137,145,1241,501,	0,2154,3092,3407,4179,4367,5081,5533,9451,9670,9985,10275,10511,11845,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	44809114	44812046	chr19:44809114-44812046	0	+	44809114	44809114	8553170	2	92,822,	0,2110,
#Partially deleted in new
chr19	44809120	44814288	chr19:44809120-44814288	0	+	44809124	44814288	789624	7	86,122,166,71,97,183,137,	0,2104,3105,3357,4129,4317,5031,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	44809129	44812953	chr19:44809129-44812953	0	+	44809129	44809129	8553170	4	77,122,229,476,	0,2095,3033,3348,
#Deleted in new
chr19	44813147	44813667	chr19:44813147-44813667	0	+	44813147	44813147	8553170	2	199,230,	0,290,
#Partially deleted in new
chr19	44813437	44818802	chr19:44813437-44818802	0	+	44813437	44814605	789624	4	183,157,116,62,	0,1166,5084,5303,
#Deleted in new
chr19	44818530	44819244	chr19:44818530-44819244	0	+	44818530	44818530	8553170	2	107,504,	0,210,
#Deleted in new
chr19	44819246	44820060	chr19:44819246-44820060	0	+	44819246	44819246	8553170	2	244,479,	0,335,
#Partially deleted in new
chr19	44846174	44878941	chr19:44846174-44878941	3	+	44846525	44878620	0	6	439,390,297,118,149,719,	0,19096,25678,27741,28155,32048,
#Partially deleted in new
chr19	44846525	44889228	chr19:44846525-44889228	1	+	44846525	44888379	0	9	88,390,297,118,149,154,64,87,1119,	0,18745,25327,27390,27804,35685,39411,39607,41584,
#Partially deleted in new
chr19	44871852	44878938	chr19:44871852-44878938	0	+	44871852	44878620	789624	4	297,118,149,386,	0,2063,2477,6700,
#Deleted in new
chr19	44873941	44874689	chr19:44873941-44874689	0	+	44873941	44873941	8553170	2	92,360,	0,388,
#Partially deleted in new
chr19	44874378	44878938	chr19:44874378-44878938	0	+	44874378	44878459	789624	2	84,566,	0,3994,
#Partially deleted in new
chr19	44882026	44890876	chr19:44882026-44890876	3	-	44882026	44882026	8553170	2	312,114,	0,8736,
#Partially deleted in new
chr19	44882337	44888894	chr19:44882337-44888894	0	+	44882337	44888245	789624	2	27,785,	0,5772,
#Deleted in new
chr19	44890568	44891525	chr19:44890568-44891525	0	+	44891415	44891525	789624	2	88,119,	0,838,
#Partially deleted in new
chr19	44891219	44903689	chr19:44891219-44903689	3	+	44891415	44903169	789624	10	95,280,68,93,102,106,123,77,103,660,	0,190,1173,1617,2560,2741,9510,9808,9988,11810,
#Partially deleted in new
chr19	44891219	44903688	chr19:44891219-44903688	1	+	44891415	44903169	789624	10	95,283,68,93,102,106,123,77,103,659,	0,187,1173,1617,2560,2741,9510,9808,9988,11810,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	44891230	44903686	chr19:44891230-44903686	1	+	44891415	44901354	789624	9	84,283,68,93,102,106,123,77,2479,	0,176,1162,1606,2549,2730,9499,9797,9977,
#Partially deleted in new
chr19	44891235	44903628	chr19:44891235-44903628	1	+	44891415	44903169	789624	9	454,68,93,102,106,123,77,103,599,	0,1157,1601,2544,2725,9494,9792,9972,11794,
#Deleted in new
chr19	44891236	44894067	chr19:44891236-44894067	0	+	44891415	44894067	789624	6	78,283,68,93,102,107,	0,170,1156,1600,2543,2724,
#Partially deleted in new
chr19	44893828	44903132	chr19:44893828-44903132	0	+	44893828	44901354	789624	6	53,106,123,77,245,103,	0,132,6901,7199,7379,9201,
#Partially deleted in new
chr19	44905753	44909393	chr19:44905753-44909393	3	+	44906624	44909250	0	4	88,66,193,861,	0,848,2006,2779,
#Partially deleted in new
chr19	44905790	44908944	chr19:44905790-44908944	0	+	44906624	44908944	789624	4	51,81,193,412,	0,796,1969,2742,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	44905795	44907326	chr19:44905795-44907326	0	+	44905795	44905795	8553170	2	46,725,	0,806,
#Partially deleted in new
chr19	44905811	44909025	chr19:44905811-44909025	0	+	44905868	44909025	789624	4	112,66,193,493,	0,790,1948,2721,
#Partially deleted in new
chr19	44906359	44908954	chr19:44906359-44908954	0	+	44906624	44908954	789624	3	308,193,422,	0,1400,2173,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	44909374	44914968	chr19:44909374-44914968	3	+	44909374	44909374	8553170	1	5594,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	44914246	44919342	chr19:44914246-44919342	3	+	44914891	44919230	0	5	243,62,78,136,170,	0,425,625,1943,4926,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	44914324	44919346	chr19:44914324-44919346	1	+	44914891	44919230	0	4	165,78,136,174,	0,547,1865,4848,
#Partially deleted in new
chr19	44914554	44919209	chr19:44914554-44919209	0	+	44914891	44919209	789624	4	179,78,136,37,	0,317,1635,4618,
#Partially deleted in new
chr19	44914702	44919344	chr19:44914702-44919344	1	+	44914891	44919223	789624	4	31,78,281,172,	0,169,1487,4470,
#Partially deleted in new
chr19	44914709	44919343	chr19:44914709-44919343	1	+	44914891	44919204	789624	3	24,78,171,	0,162,4463,
#Partially deleted in new
chr19	44914839	44916292	chr19:44914839-44916292	0	+	44914891	44916292	789624	2	110,103,	0,1350,
#Partially deleted in new
chr19	44914868	44919346	chr19:44914868-44919346	1	+	44914891	44919223	789624	3	81,170,174,	0,1321,4304,
#Duplicated in new
chr19	44914868	44919342	chr19:44914868-44919342	0	+	44914891	44918898	789624	4	81,136,121,170,	0,1321,3972,4304,
#Partially deleted in new
chr19	44914868	44919349	chr19:44914868-44919349	0	+	44914891	44915159	789624	4	81,120,136,177,	0,229,1321,4304,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	44926803	44931386	chr19:44926803-44931386	7	+	44926803	44926803	16724991	4	29,78,136,387,	0,152,991,4196,
#Partially deleted in new
chr19	44926803	44931193	chr19:44926803-44931193	5	+	44926803	44926803	16724991	3	230,136,194,	0,991,4196,
#Partially deleted in new
chr19	44926819	44931190	chr19:44926819-44931190	4	+	44926819	44926819	16724991	3	10,78,191,	0,136,4180,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	44926952	44931328	chr19:44926952-44931328	4	+	44926952	44926952	16724991	3	81,321,329,	0,657,4047,
#Partially deleted in new
chr19	44926975	44931058	chr19:44926975-44931058	5	+	44926975	44926975	16724991	3	58,136,59,	0,819,4024,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	44942237	44949565	chr19:44942237-44949565	0	+	44942277	44945305	789624	6	116,142,936,68,160,407,	0,2511,2902,6228,6463,6921,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	44942237	44945496	chr19:44942237-44945496	3	+	44942277	44945305	789624	3	116,142,357,	0,2511,2902,
#Partially deleted in new
chr19	44942255	44949370	chr19:44942255-44949370	3	+	44942277	44949249	789624	5	98,142,68,160,212,	0,2493,6210,6445,6903,
#Partially deleted in new
chr19	44942273	44945016	chr19:44942273-44945016	1	+	44942277	44944894	789624	2	80,268,	0,2475,
#Partially deleted in new
chr19	44945981	44949563	chr19:44945981-44949563	3	+	44948478	44949249	0	4	94,68,160,405,	0,2484,2719,3177,
#Partially deleted in new
chr19	44946034	44949395	chr19:44946034-44949395	1	+	44948478	44948851	789624	4	41,68,98,237,	0,2431,2728,3124,
#Partially deleted in new
chr19	44946055	44949399	chr19:44946055-44949399	1	+	44948478	44949249	789624	4	20,68,118,241,	0,2410,2645,3103,
#Partially deleted in new
chr19	44947202	44949565	chr19:44947202-44949565	1	+	44948478	44949249	0	4	109,68,160,407,	0,1263,1498,1956,
#Partially deleted in new
chr19	44948285	44949332	chr19:44948285-44949332	1	+	44948478	44948864	789624	2	248,632,	0,415,
#Partially deleted in new
chr19	44954584	44987862	chr19:44954584-44987862	0	+	44954584	44954584	8553170	8	117,113,124,159,118,86,121,684,	0,7378,18502,19854,22758,30633,31870,32594,
#Partially deleted in new
chr19	44954590	44993196	chr19:44954590-44993196	1	+	44955055	44992897	789624	14	495,113,124,159,118,86,121,245,94,191,96,136,168,586,	0,7372,18496,19848,22752,30627,31864,32588,33489,35804,36259,36647,37642,38020,
#Partially deleted in new
chr19	44954590	44993190	chr19:44954590-44993190	1	+	44973207	44992897	789624	14	111,113,124,159,118,86,121,245,94,191,96,136,168,580,	0,7372,18496,19848,22752,30627,31864,32588,33489,35804,36259,36647,37642,38020,
#Partially deleted in new
chr19	44955245	44993341	chr19:44955245-44993341	3	+	44955395	44992897	789624	14	222,113,124,159,118,86,121,245,94,191,96,136,168,731,	0,6717,17841,19193,22097,29972,31209,31933,32834,35149,35604,35992,36987,37365,
#Partially deleted in new
chr19	44955380	44985303	chr19:44955380-44985303	0	+	44955395	44985303	789624	5	87,113,124,118,86,	0,6582,17706,21962,29837,
#Partially deleted in new
chr19	44955557	44974490	chr19:44955557-44974490	0	+	44973207	44974490	789624	4	283,113,124,52,	0,6405,17529,18881,
#Partially deleted in new
chr19	44974546	44986936	chr19:44974546-44986936	0	+	44974546	44974546	8553170	4	51,118,86,482,	0,2796,10671,11908,
#Partially deleted in new
chr19	44984286	44987390	chr19:44984286-44987390	0	+	44984286	44984286	8553170	4	330,86,121,212,	0,931,2168,2892,
#Partially deleted in new
chr19	44986903	44990585	chr19:44986903-44990585	0	+	44986903	44986903	8553170	3	520,94,191,	0,1176,3491,
#Partially deleted in new
chr19	44987360	44992636	chr19:44987360-44992636	0	+	44987360	44992247	789624	6	63,94,191,96,168,26,	0,719,3034,3489,4872,5250,
#Deleted in new
chr19	44989983	44991259	chr19:44989983-44991259	0	+	44989983	44989983	8553170	3	602,96,22,	0,866,1254,
#Deleted in new
chr19	44992267	44993194	chr19:44992267-44993194	0	+	44992267	44993049	789624	2	133,642,	0,285,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	45001429	45038194	chr19:45001429-45038194	3	+	45001579	45037790	789624	12	256,48,9,341,158,92,132,105,216,69,78,790,	0,1519,8384,10506,20623,23899,24176,27458,31104,32814,33021,35975,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	45001448	45038198	chr19:45001448-45038198	1	+	45001579	45037790	789624	12	237,46,11,341,158,92,132,105,216,69,78,794,	0,1500,8363,10487,20604,23880,24157,27439,31085,32795,33002,35956,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	45001460	45038159	chr19:45001460-45038159	1	+	45001579	45037790	789624	11	225,48,341,158,92,132,105,216,69,78,755,	0,1488,10475,20592,23868,24145,27427,31073,32783,32990,35944,
#Partially deleted in new
chr19	45001460	45012229	chr19:45001460-45012229	0	+	45001579	45008480	789624	5	225,48,264,9,294,	0,1488,6997,8353,10475,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	45021829	45025678	chr19:45021829-45025678	0	+	45021829	45021829	8553170	3	381,92,73,	0,3499,3776,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	45032423	45037568	chr19:45032423-45037568	0	+	45032423	45032423	8553170	3	326,285,164,	0,1820,4981,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	45032707	45038122	chr19:45032707-45038122	0	+	45032707	45037790	789624	2	42,718,	0,4697,
#Partially deleted in new
chr19	45039039	45070956	chr19:45039039-45070956	3	+	45040212	45070845	789624	21	69,128,98,102,80,85,149,97,79,74,42,216,288,258,40,61,59,47,83,25,154,	0,1144,13031,13751,14058,17410,18710,20228,21349,21514,23114,24972,25303,28297,28975,29380,30026,30162,30982,31497,31763,
#Partially deleted in new
chr19	45039045	45070855	chr19:45039045-45070855	1	+	45040212	45070845	789624	20	63,128,27,67,85,149,97,79,74,42,216,288,258,40,61,59,47,83,25,53,	0,1138,13025,14065,17404,18704,20222,21343,21508,23108,24966,25297,28291,28969,29374,30020,30156,30976,31491,31757,
#Partially deleted in new
chr19	45039049	45060442	chr19:45039049-45060442	0	+	45040212	45057811	789624	6	59,128,85,149,97,54,	0,1134,17400,18700,20218,21339,
#Partially deleted in new
chr19	45039049	45053087	chr19:45039049-45053087	0	+	45039049	45039049	8553170	4	59,128,98,297,	0,1134,13021,13741,
#Partially deleted in new
chr19	45039064	45070956	chr19:45039064-45070956	0	+	45040212	45069078	789624	21	44,128,98,102,80,85,149,97,79,74,42,216,288,258,44,61,59,47,83,25,154,	0,1119,13006,13726,14033,17385,18685,20203,21324,21489,23089,24947,25278,28272,28950,29355,30001,30137,30957,31472,31738,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	45039073	45040747	chr19:45039073-45040747	0	+	45039073	45039073	8553170	2	35,564,	0,1110,
#Partially deleted in new
chr19	45039073	45052853	chr19:45039073-45052853	0	+	45040212	45052853	789624	4	35,394,98,63,	0,844,12997,13717,
#Partially deleted in new
chr19	45039520	45070954	chr19:45039520-45070954	1	+	45040212	45070845	789624	19	791,98,102,80,85,149,97,79,74,42,216,288,258,44,59,47,83,25,152,	0,12550,13270,13577,16929,18229,19747,20868,21033,22633,24491,24822,27816,28494,29545,29681,30501,31016,31282,
#Partially deleted in new
chr19	45040269	45064046	chr19:45040269-45064046	0	+	45040269	45059294	789624	11	42,98,102,80,85,133,97,79,74,42,35,	0,11801,12521,12828,16180,17480,18998,20119,20284,21884,23742,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	45047457	45047561	chr19:45047457-45047561	3	+	45047457	45047457	8553170	1	104,	0,
#Partially deleted in new
chr19	45052799	45058253	chr19:45052799-45058253	0	+	45052799	45052799	8553170	3	378,85,504,	0,3650,4950,
#Deleted in new
chr19	45067470	45068180	chr19:45067470-45068180	0	+	45067470	45067470	8553170	2	124,166,	0,544,
#Partially deleted in new
chr19	45068201	45070942	chr19:45068201-45070942	0	+	45068201	45068201	8553170	6	279,59,47,83,25,140,	0,864,1000,1820,2335,2601,
#Partially deleted in new
chr19	45068419	45070955	chr19:45068419-45070955	0	+	45068419	45070845	789624	6	61,59,47,161,25,153,	0,646,782,1524,2117,2383,
#Partially deleted in new
chr19	45069082	45070873	chr19:45069082-45070873	0	+	45069082	45069082	8553170	4	166,83,25,71,	0,939,1454,1720,
#Partially deleted in new
chr19	45069645	45070828	chr19:45069645-45070828	0	+	45069645	45069645	8553170	2	459,292,	0,891,
#Partially deleted in new
chr19	45069838	45070956	chr19:45069838-45070956	0	+	45069838	45069838	8553170	3	266,25,154,	0,698,964,
#Partially deleted in new
chr19	45071499	45076588	chr19:45071499-45076588	3	-	45071600	45076373	789624	3	1081,150,513,	0,4213,4576,
#Partially deleted in new
chr19	45071500	45076587	chr19:45071500-45076587	1	-	45071600	45076301	789624	4	1080,150,243,158,	0,4212,4575,4929,
#Partially deleted in new
chr19	45076509	45090391	chr19:45076509-45090391	1	-	45076509	45076509	8553170	2	367,323,	0,13559,
#Partially deleted in new
chr19	45079194	45090869	chr19:45079194-45090869	1	+	45090114	45090510	0	2	85,763,	0,10912,
#Partially deleted in new
chr19	45079257	45090537	chr19:45079257-45090537	1	+	45090114	45090510	0	3	22,123,431,	0,649,10849,
#Partially deleted in new
chr19	45079261	45091524	chr19:45079261-45091524	3	+	45090114	45090510	0	3	116,123,1418,	0,645,10845,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	45079262	45088699	chr19:45079262-45088699	0	+	45079262	45079262	8553170	3	115,123,191,	0,644,9246,
#Partially deleted in new
chr19	45079268	45090713	chr19:45079268-45090713	1	+	45090114	45090510	0	2	109,607,	0,10838,
#Partially deleted in new
chr19	45079287	45266246	chr19:45079287-45266246	0	+	45263339	45266246	789624	7	90,201,54,49,66,71,22,	0,179701,183825,184031,185396,185552,186937,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	45085328	45090374	chr19:45085328-45090374	3	-	45085328	45085328	789624	2	312,306,	0,4740,
#Partially deleted in new
chr19	45091395	45093156	chr19:45091395-45093156	0	+	45091395	45091395	8553170	2	103,73,	0,1688,
#Partially deleted in new
chr19	45091791	45093271	chr19:45091791-45093271	0	+	45091791	45091791	8553170	2	366,188,	0,1292,
#Partially deleted in new
chr19	45092961	45147285	chr19:45092961-45147285	3	+	45093325	45146472	789624	13	566,98,46,101,120,151,156,113,142,167,697,91,715,	0,45552,47274,47544,48360,49099,49341,50559,51892,52132,52391,53428,53609,
#Partially deleted in new
chr19	45093173	45142197	chr19:45093173-45142197	0	+	45093325	45142197	789624	4	354,101,120,137,	0,47332,48148,48887,
#Partially deleted in new
chr19	45100063	45141386	chr19:45100063-45141386	0	+	45100063	45100063	8553170	5	217,98,46,101,65,	0,38450,40172,40442,41258,
#Deleted in new
chr19	45128568	45129030	chr19:45128568-45129030	7	+	45128568	45128568	16724991	1	462,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	45135992	45136977	chr19:45135992-45136977	3	-	45135992	45135992	8553170	2	358,114,	0,871,
#Partially deleted in new
chr19	45138575	45141386	chr19:45138575-45141386	0	+	45138575	45138575	8553170	4	36,46,156,65,	0,1660,1930,2746,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	45141417	45148077	chr19:45141417-45148077	0	+	45141417	45141417	8553170	3	24,2935,2984,	0,643,3676,
#Deleted in new
chr19	45145131	45147280	chr19:45145131-45147280	0	+	45145131	45145131	8553170	3	918,91,710,	0,1258,1439,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	45149749	45158737	chr19:45149749-45158737	3	-	45151937	45153770	789624	3	4026,132,75,	0,6035,8913,
#Deleted in new
chr19	45151902	45153852	chr19:45151902-45153852	1	-	45151937	45153770	789624	1	1950,	0,
#Partially deleted in new
chr19	45162927	45178237	chr19:45162927-45178237	1	-	45163191	45178218	0	6	296,94,84,118,68,145,	0,988,1236,1925,2199,15165,
#Partially deleted in new
chr19	45162927	45178237	chr19:45162927-45178237	1	-	45163953	45178218	0	5	296,94,84,118,103,	0,988,1236,1925,15207,
#Partially deleted in new
chr19	45162932	45178237	chr19:45162932-45178237	3	-	45163191	45178218	0	6	291,94,84,118,68,103,	0,983,1231,1920,2194,15202,
#Partially deleted in new
chr19	45163140	45178227	chr19:45163140-45178227	1	-	45163953	45178218	0	5	83,94,84,118,135,	0,775,1023,1712,14952,
#Partially deleted in new
chr19	45164724	45178211	chr19:45164724-45178211	0	-	45164724	45164724	8553170	3	246,68,119,	0,402,13368,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	45178744	45181801	chr19:45178744-45181801	3	+	45179296	45179905	789624	2	87,2514,	0,543,
#Deleted in new
chr19	45179222	45179954	chr19:45179222-45179954	1	+	45179296	45179905	789624	1	732,	0,
#Partially deleted in new
chr19	45179668	45181466	chr19:45179668-45181466	0	+	45179668	45179905	789624	2	274,195,	0,1603,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	45179821	45202444	chr19:45179821-45202444	3	+	45179821	45179905	789624	5	121,111,154,125,39,	0,7509,7765,19067,22584,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	45187387	45216933	chr19:45187387-45216933	3	+	45187387	45187387	8553170	4	54,126,102,258,	0,227,15018,29288,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	45212620	45245431	chr19:45212620-45245431	3	-	45213068	45239045	789624	12	737,122,156,123,136,111,101,102,112,634,539,91,	0,3452,4907,5576,12157,15041,15353,15544,19142,21572,25902,32720,
#Partially deleted in new
chr19	45213068	45231852	chr19:45213068-45231852	1	-	45213068	45231852	789624	9	289,122,156,123,136,111,101,102,90,	0,3004,4459,5128,11709,14593,14905,15096,18694,
#Partially deleted in new
chr19	45251257	45303693	chr19:45251257-45303693	3	+	45251588	45302710	0	17	382,201,54,49,66,71,57,237,120,100,110,160,218,104,279,45,1320,	0,7731,11855,12061,13426,13582,14967,20214,26665,27258,29116,29317,36189,43091,46418,48553,51116,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr19	45251291	45305283	chr19:45251291-45305283	1	+	45251588	45302438	0	18	348,201,54,49,66,71,57,237,120,100,110,160,218,104,279,80,45,2910,	0,7697,11821,12027,13392,13548,14933,20180,26631,27224,29082,29283,36155,43057,46384,46851,48519,51082,
#Partially deleted in new
chr19	45251386	45280657	chr19:45251386-45280657	0	+	45251588	45280379	789624	4	253,237,110,83,	0,20085,28987,29188,
#Partially deleted in new
chr19	45251386	45303681	chr19:45251386-45303681	1	+	45251588	45280379	789624	7	253,237,110,82,70,45,1308,	0,20085,28987,29188,46498,48424,50987,
#Partially deleted in new
chr19	45258892	45266281	chr19:45258892-45266281	0	+	45263339	45266281	789624	6	297,54,49,66,71,57,	0,4220,4426,5791,5947,7332,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	45262990	45271677	chr19:45262990-45271677	0	+	45262990	45262990	8553170	6	176,49,66,71,57,206,	0,328,1693,1849,3234,8481,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	45264686	45288552	chr19:45264686-45288552	0	+	45264686	45264686	8553170	9	63,71,57,237,120,100,110,160,1106,	0,153,1538,6785,13236,13829,15687,15888,22760,
#Partially deleted in new
chr19	45271475	45287664	chr19:45271475-45287664	0	+	45271475	45277987	789624	6	139,62,100,110,160,218,	0,6505,7040,8898,9099,15971,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	45280144	45287664	chr19:45280144-45287664	0	+	45280144	45280144	8553170	3	339,160,218,	0,430,7302,
#Partially deleted in new
chr19	45294354	45303369	chr19:45294354-45303369	1	+	45302470	45302710	789624	4	26,80,45,996,	0,3788,5456,8019,
#Partially deleted in new
chr19	45306413	45322977	chr19:45306413-45322977	3	-	45306749	45319713	0	8	515,190,124,172,133,155,211,157,	0,1047,1995,5335,9051,11411,13107,16407,
#Partially deleted in new
chr19	45332697	45333124	chr19:45332697-45333124	7	-	45332697	45332697	16724991	1	427,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	45333433	45350387	chr19:45333433-45350387	0	+	45345541	45350387	789624	10	730,78,266,231,70,220,88,102,174,47,	0,2508,12100,13110,14013,14507,15212,15386,15995,16907,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	45340739	45347364	chr19:45340739-45347364	0	+	45340739	45340739	8553170	3	107,266,821,	0,4794,5804,
#Partially deleted in new
chr19	45340752	45351520	chr19:45340752-45351520	3	+	45345541	45351357	789624	13	94,266,231,70,220,88,102,174,91,38,107,64,235,	0,4781,5791,6694,7188,7893,8067,8676,9588,9761,9888,10201,10533,
#Partially deleted in new
chr19	45340760	45351515	chr19:45340760-45351515	1	+	45345541	45351357	789624	13	86,266,231,67,220,88,102,174,91,38,107,64,230,	0,4773,5783,6689,7180,7885,8059,8668,9580,9753,9880,10193,10525,
#Partially deleted in new
chr19	45340773	45348892	chr19:45340773-45348892	0	+	45345541	45348892	789624	7	73,218,231,70,220,88,73,	0,4760,5770,6673,7167,7872,8046,
#Partially deleted in new
chr19	45344868	45346757	chr19:45344868-45346757	0	+	45345541	45346757	789624	3	329,266,214,	0,665,1675,
#Partially deleted in new
chr19	45345399	45351520	chr19:45345399-45351520	1	+	45345499	45351357	789624	12	400,231,70,220,88,102,174,91,38,107,64,235,	0,1144,2047,2541,3246,3420,4029,4941,5114,5241,5554,5886,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr19	45349836	45370587	chr19:45349836-45370587	3	-	45351628	45370540	0	23	1885,144,144,71,73,93,122,64,102,70,70,119,169,134,97,124,117,117,114,63,78,100,52,	0,2372,2669,2909,3246,3405,4893,5828,7433,7637,7793,11687,13906,14149,14398,14587,15001,15205,18793,19093,19233,20296,20699,
#Partially deleted in new
chr19	45350889	45370560	chr19:45350889-45370560	0	-	45350889	45350889	8553170	22	832,144,144,71,73,93,122,64,102,70,70,119,169,134,97,124,117,117,114,218,100,25,	0,1319,1616,1856,2193,2352,3840,4775,6380,6584,6740,10634,12853,13096,13345,13534,13948,14152,17740,18040,19243,19646,
#Partially deleted in new
chr19	45351390	45370587	chr19:45351390-45370587	1	-	45351628	45370540	789624	21	331,144,144,71,73,93,122,64,102,70,70,119,169,134,97,124,114,63,78,100,52,	0,818,1115,1355,1692,1851,3339,4274,5879,6083,6239,10133,12352,12595,12844,13033,17239,17539,17679,18742,19145,
#Partially deleted in new
chr19	45351594	45361931	chr19:45351594-45361931	0	-	45351594	45351594	8553170	12	127,144,144,71,73,93,122,64,102,70,70,408,	0,614,911,1151,1488,1647,3135,4070,5675,5879,6035,9929,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	45351594	45358938	chr19:45351594-45358938	0	-	45351594	45351594	8553170	10	127,144,144,71,73,93,122,64,102,1465,	0,614,911,1151,1488,1647,3135,4070,5675,5879,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr19	45352208	45370918	chr19:45352208-45370918	0	-	45352208	45370165	789624	21	144,144,71,73,93,122,64,102,70,70,119,169,134,97,124,117,117,114,63,78,786,	0,297,537,874,1033,2521,3456,5061,5265,5421,9315,11534,11777,12026,12215,12629,12833,16421,16721,16861,17924,
#Partially deleted in new
chr19	45353149	45364057	chr19:45353149-45364057	0	-	45354845	45364057	789624	9	6,93,122,102,70,70,119,169,72,	0,92,1580,4120,4324,4480,8374,10593,10836,
#Partially deleted in new
chr19	45358758	45370384	chr19:45358758-45370384	1	-	45358859	45370165	0	12	154,119,169,134,97,124,117,117,114,63,78,252,	0,2765,4984,5227,5476,5665,6079,6283,9871,10171,10311,11374,
#Partially deleted in new
chr19	45363985	45370541	chr19:45363985-45370541	0	-	45363985	45370165	789624	10	134,97,124,117,117,114,63,78,100,71,	0,249,438,852,1056,4644,4944,5084,6147,6485,
#Partially deleted in new
chr19	45364036	45370557	chr19:45364036-45370557	0	-	45364307	45370540	789624	7	83,97,114,63,78,100,22,	0,198,4593,4893,5033,6096,6499,
#Partially deleted in new
chr19	45364090	45370555	chr19:45364090-45370555	0	-	45364090	45364090	8553170	5	29,97,117,218,20,	0,144,4539,4839,6445,
#Partially deleted in new
chr19	45364235	45370555	chr19:45364235-45370555	0	-	45364235	45364235	8553170	6	96,117,117,114,218,20,	0,602,806,4394,4694,6300,
#Partially deleted in new
chr19	45365041	45370528	chr19:45365041-45370528	0	-	45365041	45370165	789624	4	117,114,63,396,	0,3588,3888,5091,
#Partially deleted in new
chr19	45379633	45405038	chr19:45379633-45405038	1	-	45380189	45398318	0	13	595,200,167,134,132,461,451,92,99,514,143,76,40,	0,2893,5928,6190,6415,12246,15802,16534,16704,16911,18371,18630,25365,
#Partially deleted in new
chr19	45379637	45406349	chr19:45379637-45406349	3	-	45380189	45398318	0	13	591,200,167,134,132,461,451,92,99,514,143,76,58,	0,2889,5924,6186,6411,12242,15798,16530,16700,16907,18367,18626,26654,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	45379637	45393167	chr19:45379637-45393167	0	-	45379637	45379637	8553170	6	591,200,167,134,132,1288,	0,2889,5924,6186,6411,12242,
#Partially deleted in new
chr19	45379637	45382592	chr19:45379637-45382592	0	-	45379719	45382592	789624	2	289,66,	0,2889,
#Partially deleted in new
chr19	45379637	45385618	chr19:45379637-45385618	0	-	45380196	45385618	789624	2	591,57,	0,5924,
#Partially deleted in new
chr19	45382563	45386103	chr19:45382563-45386103	0	-	45382563	45382563	8553170	3	163,167,280,	0,2998,3260,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	45394652	45406309	chr19:45394652-45406309	0	-	45394652	45394652	8553170	7	1234,92,99,514,143,76,18,	0,1515,1685,1892,3352,3611,11639,
#Partially deleted in new
chr19	45396871	45406327	chr19:45396871-45406327	0	-	45396871	45398318	789624	5	187,143,76,83,36,	0,1133,1392,8127,9420,
#Partially deleted in new
chr19	45398022	45405063	chr19:45398022-45405063	0	-	45398022	45398318	789624	4	125,76,126,65,	0,241,3976,6976,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	45406208	45410766	chr19:45406208-45410766	3	+	45406696	45409501	789624	3	510,142,2634,	0,885,1924,
#Partially deleted in new
chr19	45406661	45408619	chr19:45406661-45408619	0	+	45408502	45408619	789624	2	574,487,	0,1471,
#Partially deleted in new
chr19	45406690	45409786	chr19:45406690-45409786	1	+	45406696	45409501	789624	3	34,142,1654,	0,403,1442,
#Partially deleted in new
chr19	45406698	45408601	chr19:45406698-45408601	0	+	45406698	45408314	789624	2	20,469,	0,1434,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	45407332	45424365	chr19:45407332-45424365	3	-	45409674	45423374	0	10	2393,69,72,100,77,100,104,216,112,585,	0,6344,6630,7528,9488,11765,12991,13845,15937,16448,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	45407333	45478828	chr19:45407333-45478828	1	-	45409674	45423374	0	9	2392,69,72,100,77,100,104,112,93,	0,6343,6629,7527,9487,11764,12990,15936,71402,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	45409545	45414616	chr19:45409545-45414616	0	-	45409545	45409545	8553170	4	180,69,72,265,	0,4131,4417,4806,
#Partially deleted in new
chr19	45409613	45423839	chr19:45409613-45423839	1	-	45409674	45423374	0	9	112,69,100,77,100,104,216,112,59,	0,4063,5247,7207,9484,10710,11564,13656,14167,
#Partially deleted in new
chr19	45409615	45419186	chr19:45409615-45419186	0	-	45409685	45419186	789624	4	110,69,77,89,	0,4061,7205,9482,
#Partially deleted in new
chr19	45409618	45423501	chr19:45409618-45423501	1	-	45409685	45423374	789624	6	107,77,100,104,216,232,	0,7202,9479,10705,11559,13651,
#Partially deleted in new
chr19	45409667	45424367	chr19:45409667-45424367	1	-	45409674	45423374	0	10	58,69,72,100,77,100,104,216,112,545,	0,4009,4295,5193,7153,9430,10656,11510,13602,14155,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	45413433	45423566	chr19:45413433-45423566	1	-	45413547	45423374	0	8	312,72,100,77,100,104,216,297,	0,529,1427,3387,5664,6890,7744,9836,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	45413435	45416859	chr19:45413435-45416859	0	-	45413547	45416859	789624	3	310,100,39,	0,1425,3385,
#Partially deleted in new
chr19	45413676	45420382	chr19:45413676-45420382	0	-	45419410	45420382	789624	7	69,72,100,77,100,79,59,	0,286,1184,3144,5421,5734,6647,
#Partially deleted in new
chr19	45413676	45423485	chr19:45413676-45423485	0	-	45413676	45423374	789624	7	69,72,100,77,100,104,216,	0,286,1184,3144,5421,6647,9593,
#Partially deleted in new
chr19	45414737	45423872	chr19:45414737-45423872	0	-	45414737	45414737	8553170	7	223,77,100,104,216,112,50,	0,2083,4360,5586,6440,8532,9085,
#Partially deleted in new
chr19	45414860	45423605	chr19:45414860-45423605	0	-	45414860	45423374	789624	7	100,77,100,104,216,112,29,	0,1960,4237,5463,6317,8409,8716,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	45416490	45423938	chr19:45416490-45423938	0	-	45416490	45416490	8553170	6	407,100,104,216,112,116,	0,2607,3833,4687,6779,7332,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	45420323	45429210	chr19:45420323-45429210	0	-	45420323	45423374	789624	4	104,216,112,242,	0,854,2946,8645,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	45436653	45436704	chr19:45436653-45436704	3	+	45436653	45436653	5263520	1	51,	0,
#Partially deleted in new
chr19	45467994	45475178	chr19:45467994-45475178	3	+	45468586	45473012	0	4	718,321,108,2628,	0,2634,3199,4556,
#Partially deleted in new
chr19	45467994	45475178	chr19:45467994-45475178	1	+	45468586	45473012	0	3	718,321,2628,	0,2634,4556,
#Partially deleted in new
chr19	45467994	45475178	chr19:45467994-45475178	1	+	45468586	45473012	0	2	718,2628,	0,4556,
#Partially deleted in new
chr19	45467994	45475178	chr19:45467994-45475178	1	+	45468586	45473012	0	3	718,204,2628,	0,2751,4556,
#Partially deleted in new
chr19	45467994	45475178	chr19:45467994-45475178	1	+	45468586	45473012	0	4	718,204,108,2628,	0,2751,3199,4556,
#Partially deleted in new
chr19	45467994	45473012	chr19:45467994-45473012	1	+	45468586	45473012	0	5	718,321,108,156,165,	0,2634,3199,4556,4853,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	45467995	45472081	chr19:45467995-45472081	1	+	45468586	45471036	789624	2	717,1453,	0,2633,
#Partially deleted in new
chr19	45468434	45473040	chr19:45468434-45473040	1	+	45468586	45472849	789624	5	278,321,108,156,194,	0,2194,2759,4116,4412,
#Partially deleted in new
chr19	45469875	45474597	chr19:45469875-45474597	1	+	45470649	45472849	789624	4	1074,108,156,1751,	0,1318,2675,2971,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	45469885	45472067	chr19:45469885-45472067	0	+	45469885	45469885	8553170	1	2182,	0,
#Partially deleted in new
chr19	45469912	45475179	chr19:45469912-45475179	1	+	45470649	45473012	0	3	1037,108,2629,	0,1281,2638,
#Partially deleted in new
chr19	45470264	45472553	chr19:45470264-45472553	0	+	45470649	45472553	789624	4	148,321,108,3,	0,364,929,2286,
#Partially deleted in new
chr19	45471078	45473067	chr19:45471078-45473067	0	+	45471078	45471078	8553170	2	223,517,	0,1472,
#Partially deleted in new
chr19	45485288	45497061	chr19:45485288-45497061	1	-	45485707	45496825	789624	11	501,59,47,70,139,208,219,255,480,45,270,	0,766,3182,3348,3559,4057,7871,8877,9237,9806,11503,
#Partially deleted in new
chr19	45485293	45497055	chr19:45485293-45497055	1	-	45485707	45496825	789624	10	496,59,47,70,139,208,255,480,45,264,	0,761,3177,3343,3554,4052,8872,9232,9801,11498,
#Partially deleted in new
chr19	45485293	45493267	chr19:45485293-45493267	3	-	45485707	45493172	789624	7	496,59,47,70,139,208,108,	0,761,3177,3343,3554,4052,7866,
#Partially deleted in new
chr19	45485293	45497055	chr19:45485293-45497055	0	-	45488511	45496825	789624	10	496,59,47,139,208,219,255,480,45,264,	0,761,3177,3554,4052,7866,8872,9232,9801,11498,
#Partially deleted in new
chr19	45485293	45497055	chr19:45485293-45497055	1	-	45485707	45493370	789624	11	496,59,47,70,139,208,219,255,480,120,264,	0,761,3177,3343,3554,4052,7866,8872,9232,9801,11498,
#Partially deleted in new
chr19	45485293	45497055	chr19:45485293-45497055	0	-	45494148	45496825	789624	10	496,59,47,70,139,208,303,480,45,264,	0,761,3177,3343,3554,4052,8824,9232,9801,11498,
#Partially deleted in new
chr19	45485637	45493238	chr19:45485637-45493238	0	-	45485637	45485637	8553170	6	152,59,47,70,139,79,	0,417,2833,2999,3210,7522,
#Partially deleted in new
chr19	45485648	45488569	chr19:45485648-45488569	0	-	45485648	45485648	8553170	3	141,59,99,	0,406,2822,
#Partially deleted in new
chr19	45485681	45493220	chr19:45485681-45493220	0	-	45485681	45485681	8553170	3	108,59,61,	0,373,7478,
#Partially deleted in new
chr19	45485695	45489103	chr19:45485695-45489103	0	-	45485695	45485695	8553170	5	94,59,47,70,256,	0,359,2775,2941,3152,
#Partially deleted in new
chr19	45485934	45488973	chr19:45485934-45488973	0	-	45485934	45485934	8553170	2	179,503,	0,2536,
#Partially deleted in new
chr19	45488759	45489553	chr19:45488759-45489553	0	-	45488759	45488759	8553170	2	227,208,	0,586,
#Partially deleted in new
chr19	45488776	45502299	chr19:45488776-45502299	1	+	45499963	45502085	789624	5	203,118,106,61,283,	0,11172,11679,11873,13240,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	45493885	45494905	chr19:45493885-45494905	0	-	45493885	45493885	8553170	2	535,380,	0,640,
#Deleted in new
chr19	45494554	45496683	chr19:45494554-45496683	0	-	45494554	45494554	8553170	3	451,45,93,	0,540,2036,
#Partially deleted in new
chr19	45497230	45502302	chr19:45497230-45502302	1	+	45499963	45502200	789624	4	113,113,106,286,	0,2723,3225,4786,
#Partially deleted in new
chr19	45497250	45502510	chr19:45497250-45502510	1	+	45499963	45502085	789624	5	93,118,106,61,494,	0,2698,3205,3399,4766,
#Partially deleted in new
chr19	45498472	45502085	chr19:45498472-45502085	3	+	45498472	45502085	789624	5	939,118,106,61,69,	0,1476,1983,2177,3544,
#Partially deleted in new
chr19	45498606	45502342	chr19:45498606-45502342	0	+	45498606	45499729	789624	4	1460,106,61,326,	0,1849,2043,3410,
#Partially deleted in new
chr19	45499609	45502510	chr19:45499609-45502510	1	+	45499963	45502085	789624	5	116,118,106,61,494,	0,339,846,1040,2407,
#Partially deleted in new
chr19	45499948	45502310	chr19:45499948-45502310	1	+	45499963	45502200	789624	4	118,106,30,294,	0,507,732,2068,
#Partially deleted in new
chr19	45499960	45502310	chr19:45499960-45502310	1	+	45499963	45502200	789624	4	106,106,21,294,	0,495,729,2056,
#Partially deleted in new
chr19	45506578	45517834	chr19:45506578-45517834	0	+	45507771	45517834	789624	3	309,215,172,	0,983,11084,
#Partially deleted in new
chr19	45507415	45526983	chr19:45507415-45526983	3	+	45507771	45526177	0	13	361,172,166,85,50,242,101,52,37,46,91,58,844,	0,10247,10513,13906,14752,14924,15302,16228,16425,16681,17154,18530,18724,
#Partially deleted in new
chr19	45507487	45522581	chr19:45507487-45522581	0	+	45507771	45522581	789624	3	289,88,47,	0,10175,15047,
#Partially deleted in new
chr19	45507490	45522391	chr19:45507490-45522391	0	+	45507771	45522391	789624	3	286,50,52,	0,14677,14849,
#Partially deleted in new
chr19	45507505	45526942	chr19:45507505-45526942	0	+	45507771	45522758	789624	11	271,172,35,59,101,52,37,46,91,58,803,	0,10157,10423,15017,15212,16138,16335,16591,17064,18440,18634,
#Partially deleted in new
chr19	45507509	45522217	chr19:45507509-45522217	0	+	45507509	45507509	8553170	4	267,172,166,50,	0,10153,10419,14658,
#Partially deleted in new
chr19	45522555	45526332	chr19:45522555-45526332	0	+	45522555	45525075	789624	9	26,101,52,37,46,91,200,58,193,	0,162,1088,1285,1541,2014,2322,3390,3584,
#Partially deleted in new
chr19	45522733	45523963	chr19:45522733-45523963	0	+	45522733	45522733	8553170	2	85,320,	0,910,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	45522788	45524413	chr19:45522788-45524413	0	+	45522788	45522788	8553170	3	30,52,573,	0,855,1052,
#Partially deleted in new
chr19	45524036	45526202	chr19:45524036-45526202	0	+	45524036	45524036	8553170	4	106,91,58,63,	0,533,1909,2103,
#Partially deleted in new
chr19	45525793	45526169	chr19:45525793-45526169	0	+	45525793	45525793	8553170	2	210,30,	0,346,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	45527426	45584842	chr19:45527426-45584842	1	-	45529055	45584764	789624	2	2030,220,	0,57196,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	45546280	45584819	chr19:45546280-45584819	3	-	45553513	45584764	789624	2	7631,197,	0,38342,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	45552883	45602212	chr19:45552883-45602212	1	-	45553513	45553894	789624	2	1028,118,	0,49211,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	45589763	45602208	chr19:45589763-45602208	3	-	45590777	45591866	789624	2	2934,114,	0,12331,
#Partially deleted in new
chr19	45592232	45599753	chr19:45592232-45599753	0	-	45592232	45592232	8553170	2	465,97,	0,7424,
#Partially deleted in new
chr19	45606993	45639403	chr19:45606993-45639403	1	-	45607008	45639376	789624	19	513,131,96,88,98,89,68,132,126,155,100,135,96,111,70,150,130,29,47,	0,6547,7611,8808,9467,9771,10636,12066,14213,14489,17725,19711,22957,25867,26076,27328,31511,31851,32363,
#Partially deleted in new
chr19	45609399	45639427	chr19:45609399-45639427	3	-	45609662	45639376	0	19	389,131,96,88,98,89,68,132,126,155,100,135,96,111,70,150,130,29,71,	0,4141,5205,6402,7061,7365,8230,9660,11807,12083,15319,17305,20551,23461,23670,24922,29105,29445,29957,
#Partially deleted in new
chr19	45609399	45639395	chr19:45609399-45639395	0	-	45626727	45639376	789624	17	389,131,96,88,98,89,68,132,126,155,100,135,96,111,70,29,39,	0,4141,5205,6402,7061,7365,8230,9660,11807,12083,15319,17305,20551,23461,23670,29445,29957,
#Partially deleted in new
chr19	45609399	45639391	chr19:45609399-45639391	0	-	45616823	45639376	789624	17	389,131,96,88,89,132,126,155,100,135,96,111,70,150,130,29,35,	0,4141,5205,6402,7365,9660,11807,12083,15319,17305,20551,23461,23670,24922,29105,29445,29957,
#Partially deleted in new
chr19	45609401	45643727	chr19:45609401-45643727	1	-	45609662	45643588	0	22	387,131,96,88,98,89,68,132,126,155,100,135,96,111,70,150,130,29,108,124,219,149,	0,4139,5203,6400,7059,7363,8228,9658,11805,12081,15317,17303,20549,23459,23668,24920,29103,29443,32239,32516,32732,34177,
#Partially deleted in new
chr19	45609637	45645629	chr19:45609637-45645629	1	-	45609662	45645444	0	22	151,131,96,88,98,89,68,132,126,155,100,135,96,111,70,150,130,29,108,124,219,357,	0,3903,4967,6164,6823,7127,7992,9422,11569,11845,15081,17067,20313,23223,23432,24684,28867,29207,32003,32280,32496,35635,
#Partially deleted in new
chr19	45609661	45616152	chr19:45609661-45616152	0	-	45609661	45609661	8553170	4	127,131,96,351,	0,3879,4943,6140,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	45609719	45616495	chr19:45609719-45616495	0	-	45614929	45616495	789624	6	69,131,96,211,88,35,	0,3821,4885,5106,6082,6741,
#Partially deleted in new
chr19	45615858	45619090	chr19:45615858-45619090	0	-	45615858	45619090	789624	4	31,89,68,31,	0,906,1771,3201,
#Partially deleted in new
chr19	45616484	45619494	chr19:45616484-45619494	0	-	45616484	45616484	8553170	4	74,89,68,435,	0,280,1145,2575,
#Partially deleted in new
chr19	45616495	45626752	chr19:45616495-45626752	0	-	45621324	45626752	789624	7	63,89,68,132,126,100,48,	0,269,1134,2564,4711,8223,10209,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr19	45616499	45644917	chr19:45616499-45644917	0	-	45618859	45644751	789624	19	59,89,68,122,132,126,155,100,135,96,111,70,150,130,29,108,124,219,209,	0,265,1130,2322,2560,4707,4983,8219,10205,13451,16361,16570,17822,22005,22345,25141,25418,25634,28209,
#Partially deleted in new
chr19	45616517	45624782	chr19:45616517-45624782	0	-	45616517	45624782	789624	6	41,89,68,126,155,64,	0,247,1112,4689,4965,8201,
#Partially deleted in new
chr19	45617676	45630032	chr19:45617676-45630032	0	-	45617676	45630032	789624	4	21,132,126,82,	0,1383,3530,12274,
#Partially deleted in new
chr19	45620811	45639401	chr19:45620811-45639401	0	-	45620811	45620811	8553170	11	521,155,100,135,96,111,70,150,130,29,45,	0,671,3907,5893,9139,12049,12258,13510,17693,18033,18545,
#Partially deleted in new
chr19	45621162	45639397	chr19:45621162-45639397	0	-	45621162	45621162	8553170	10	170,155,135,96,111,70,150,130,29,41,	0,320,5542,8788,11698,11907,13159,17342,17682,18194,
#Partially deleted in new
chr19	45621206	45633111	chr19:45621206-45633111	0	-	45621206	45633111	789624	6	126,155,100,135,111,42,	0,276,3512,5498,11654,11863,
#Partially deleted in new
chr19	45621553	45632662	chr19:45621553-45632662	0	-	45621553	45621553	8553170	5	84,100,135,96,142,	0,3165,5151,8397,10967,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	45623455	45632662	chr19:45623455-45632662	0	-	45623455	45623455	8553170	5	66,100,135,96,142,	0,1263,3249,6495,9065,
#Partially deleted in new
chr19	45626704	45639104	chr19:45626704-45639104	0	-	45626704	45638617	789624	7	135,96,111,70,150,130,260,	0,3246,6156,6365,7617,11800,12140,
#Partially deleted in new
chr19	45629963	45634496	chr19:45629963-45634496	0	-	45629963	45629963	8553170	3	83,279,175,	0,2897,4358,
#Partially deleted in new
chr19	45632860	45642381	chr19:45632860-45642381	0	-	45632860	45632860	8553170	8	111,70,150,130,29,105,124,248,	0,209,1461,5644,5984,8780,9057,9273,
#Partially deleted in new
chr19	45632860	45639242	chr19:45632860-45639242	0	-	45632860	45638617	789624	6	111,70,150,130,29,36,	0,209,1461,5644,5984,6346,
#Partially deleted in new
chr19	45632905	45640131	chr19:45632905-45640131	0	-	45632905	45638617	789624	6	66,70,150,130,29,108,	0,164,1416,5599,5939,7118,
#Partially deleted in new
chr19	45633069	45639397	chr19:45633069-45639397	0	-	45633069	45638617	789624	5	70,150,130,29,103,	0,1252,5435,5775,6225,
#Partially deleted in new
chr19	45633107	45638873	chr19:45633107-45638873	0	-	45633107	45638617	789624	3	32,150,369,	0,1214,5397,
#Deleted in new
chr19	45638993	45639087	chr19:45638993-45639087	3	-	45638993	45638993	5263520	1	94,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	45640416	45642778	chr19:45640416-45642778	0	-	45640416	45640416	8553170	1	2362,	0,
#Partially deleted in new
chr19	45640929	45645349	chr19:45640929-45645349	0	-	45640929	45640929	8553170	2	1423,77,	0,4343,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	45641493	45642789	chr19:45641493-45642789	3	+	45641493	45641493	789624	2	273,565,	0,731,
#Deleted in new
chr19	45641640	45642562	chr19:45641640-45642562	0	-	45641640	45642326	789624	4	108,124,219,91,	0,277,493,831,
#Deleted in new
chr19	45641646	45642357	chr19:45641646-45642357	0	+	45641646	45641646	8553170	2	120,479,	0,232,
#Partially deleted in new
chr19	45641671	45645356	chr19:45641671-45645356	0	-	45641671	45641671	8553170	3	77,435,84,	0,246,3601,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	45641690	45642840	chr19:45641690-45642840	1	+	45641690	45641690	789624	3	76,194,616,	0,188,534,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	45651509	45651805	chr19:45651509-45651805	3	+	45651509	45651509	8553170	1	296,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	45668243	45683724	chr19:45668243-45683724	3	+	45669520	45681935	0	14	55,116,100,108,104,104,145,160,61,70,89,139,42,1996,	0,1233,2391,3041,4607,5830,6438,8705,9079,9466,9662,9844,13360,13485,
#Partially deleted in new
chr19	45668255	45682155	chr19:45668255-45682155	1	+	45669520	45681711	0	13	43,116,100,108,104,104,145,160,61,70,89,139,552,	0,1221,2379,3029,4595,5818,6426,8693,9067,9454,9650,9832,13348,
#Partially deleted in new
chr19	45668256	45681988	chr19:45668256-45681988	1	+	45669520	45681935	0	13	42,116,100,104,104,145,160,61,70,89,139,42,260,	0,1220,2378,4594,5817,6425,8692,9066,9453,9649,9831,13347,13472,
#Partially deleted in new
chr19	45668256	45681993	chr19:45668256-45681993	0	+	45669520	45677910	789624	12	42,116,100,108,104,104,145,160,89,139,42,265,	0,1220,2378,3028,4594,5817,6425,8692,9649,9831,13347,13472,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	45670255	45671362	chr19:45670255-45671362	0	+	45671310	45671362	789624	2	479,78,	0,1029,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	45672617	45675412	chr19:45672617-45675412	0	+	45672617	45672617	8553170	3	337,340,32,	0,1456,2763,
#Partially deleted in new
chr19	45674927	45675024	chr19:45674927-45675024	3	+	45674927	45674927	5263520	1	97,	0,
#Partially deleted in new
chr19	45674931	45675008	chr19:45674931-45675008	3	-	45674931	45674931	5263520	1	77,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	45677525	45678400	chr19:45677525-45678400	0	+	45677525	45677525	8553170	2	469,313,	0,562,
#Partially deleted in new
chr19	45677636	45678126	chr19:45677636-45678126	0	+	45677636	45677636	8553170	3	25,89,39,	0,269,451,
#Partially deleted in new
chr19	45687453	45692333	chr19:45687453-45692333	3	-	45687552	45691888	0	3	274,180,447,	0,933,4433,
#Partially deleted in new
chr19	45687459	45691917	chr19:45687459-45691917	1	-	45687552	45687717	789624	3	268,80,31,	0,927,4427,
#Partially deleted in new
chr19	45687462	45691941	chr19:45687462-45691941	1	-	45687552	45688538	0	4	265,180,115,55,	0,924,1770,4424,
#Partially deleted in new
chr19	45687462	45692316	chr19:45687462-45692316	1	-	45687552	45691888	0	4	265,180,106,151,	0,924,4424,4703,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	45687462	45691771	chr19:45687462-45691771	1	-	45687552	45688538	0	3	265,180,360,	0,924,3949,
#Partially deleted in new
chr19	45687510	45691917	chr19:45687510-45691917	1	-	45687698	45691888	789624	3	243,180,31,	0,876,4376,
#Partially deleted in new
chr19	45692153	45692569	chr19:45692153-45692569	0	-	45692153	45692153	8553170	2	236,54,	0,362,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	45692482	45703989	chr19:45692482-45703989	3	+	45692703	45703049	0	7	428,144,282,153,100,117,1086,	0,930,2954,6064,6318,9315,10421,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	45692696	45703989	chr19:45692696-45703989	1	+	45692703	45703049	0	6	214,144,153,100,117,1086,	0,716,5850,6104,9101,10207,
#Partially deleted in new
chr19	45692757	45698825	chr19:45692757-45698825	0	+	45692757	45695701	789624	5	153,144,86,153,25,	0,655,2875,5789,6043,
#Partially deleted in new
chr19	45698479	45701823	chr19:45698479-45701823	0	+	45698479	45698479	8553170	3	220,119,26,	0,302,3318,
#Partially deleted in new
chr19	45710628	45730904	chr19:45710628-45730904	3	-	45711683	45713495	789624	2	2945,56,	0,20220,
#Partially deleted in new
chr19	45712943	45723496	chr19:45712943-45723496	0	-	45712943	45713495	789624	2	630,24,	0,10529,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	45713455	45715278	chr19:45713455-45715278	0	-	45713455	45713495	789624	2	118,510,	0,1313,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	45714386	45717381	chr19:45714386-45717381	3	-	45714386	45714386	8553170	1	2995,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	45733250	45764534	chr19:45733250-45764534	3	+	45735376	45764118	789624	15	416,71,105,130,112,138,246,109,101,156,77,189,245,90,564,	0,2126,6375,11941,17424,20400,21228,22719,23926,25627,26163,28428,28688,30087,30720,
#Deleted in new
chr19	45764784	45769226	chr19:45764784-45769226	3	-	45765500	45768844	789624	3	1327,806,1185,	0,1565,3257,
#Deleted in new
chr19	45764784	45769053	chr19:45764784-45769053	3	+	45764784	45764784	8553170	2	1180,222,	0,4047,
#Deleted in new
chr19	45764784	45768851	chr19:45764784-45768851	1	-	45765500	45768844	789624	3	1327,806,810,	0,1565,3257,
#Deleted in new
chr19	45764785	45769053	chr19:45764785-45769053	1	-	45765500	45768844	789624	2	1177,224,	0,4044,
#Deleted in new
chr19	45764888	45768627	chr19:45764888-45768627	0	-	45765930	45768627	789624	2	1223,586,	0,3153,
#Deleted in new
chr19	45765392	45768855	chr19:45765392-45768855	1	-	45767146	45768844	789624	3	1763,71,141,	0,2649,3322,
#Deleted in new
chr19	45767795	45771883	chr19:45767795-45771883	1	+	45767795	45767795	789624	2	336,394,	0,3694,
#Deleted in new
chr19	45768386	45769806	chr19:45768386-45769806	0	+	45768386	45768386	8553170	1	1420,	0,
#Partially deleted in new
chr19	45769716	45782478	chr19:45769716-45782478	1	-	45770487	45782352	0	15	924,90,47,98,158,112,86,264,207,94,149,96,84,92,286,	0,1254,1633,1851,2054,2924,5232,7610,7950,8410,8776,9547,9722,10061,12476,
#Partially deleted in new
chr19	45769716	45782552	chr19:45769716-45782552	2	-	45779851	45782352	789624	16	924,90,47,98,158,112,86,264,207,94,149,96,84,92,59,360,	0,1254,1633,1851,2054,2924,5232,7610,7950,8410,8776,9547,9722,10061,10606,12476,
#Partially deleted in new
chr19	45769719	45779619	chr19:45769719-45779619	0	-	45769719	45769719	8553170	13	921,86,47,98,158,112,86,264,207,94,149,96,181,	0,1251,1630,1848,2051,2921,5229,7607,7947,8407,8773,9544,9719,
#Partially deleted in new
chr19	45769719	45780747	chr19:45769719-45780747	1	-	45770480	45780059	789624	14	921,86,47,98,158,112,86,249,207,94,149,96,84,970,	0,1251,1630,1848,2051,2921,5229,7622,7947,8407,8773,9544,9719,10058,
#Partially deleted in new
chr19	45769724	45780603	chr19:45769724-45780603	1	-	45770487	45780059	0	14	916,90,47,98,158,112,86,264,207,94,149,96,84,826,	0,1246,1625,1843,2046,2916,5224,7602,7942,8402,8768,9539,9714,10053,
#Partially deleted in new
chr19	45769735	45782479	chr19:45769735-45782479	1	-	45770487	45782352	0	15	905,90,47,98,158,112,86,249,207,94,149,96,84,92,287,	0,1235,1614,1832,2035,2905,5213,7606,7931,8391,8757,9528,9703,10042,12457,
#Partially deleted in new
chr19	45769846	45782388	chr19:45769846-45782388	1	-	45770480	45782352	0	15	794,86,47,98,158,112,86,249,207,94,149,96,84,92,196,	0,1124,1503,1721,1924,2794,5102,7495,7820,8280,8646,9417,9592,9931,12346,
#Partially deleted in new
chr19	45769846	45782388	chr19:45769846-45782388	1	-	45770480	45782352	0	16	358,391,86,47,98,158,112,86,249,207,94,149,96,84,92,196,	0,403,1124,1503,1721,1924,2794,5102,7495,7820,8280,8646,9417,9592,9931,12346,
#Deleted in new
chr19	45769955	45771365	chr19:45769955-45771365	0	-	45769955	45769955	8553170	1	1410,	0,
#Partially deleted in new
chr19	45770380	45782489	chr19:45770380-45782489	1	-	45770632	45782352	0	13	260,98,158,112,86,249,207,94,149,96,84,92,297,	0,1187,1390,2260,4568,6961,7286,7746,8112,8883,9058,9397,11812,
#Partially deleted in new
chr19	45770509	45777447	chr19:45770509-45777447	0	-	45770509	45777447	789624	5	131,98,112,86,121,	0,1058,2131,4439,6817,
#Deleted in new
chr19	45770921	45772712	chr19:45770921-45772712	0	-	45771157	45772712	789624	4	475,98,158,72,	0,646,849,1719,
#Deleted in new
chr19	45770981	45772504	chr19:45770981-45772504	1	+	45770981	45770981	8553170	3	98,186,199,	0,508,1324,
#Deleted in new
chr19	45770995	45772504	chr19:45770995-45772504	2	+	45770995	45770995	8553170	3	84,95,199,	0,594,1310,
#Deleted in new
chr19	45771012	45772504	chr19:45771012-45772504	0	+	45771012	45771012	8553170	3	67,86,199,	0,577,1293,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	45771532	45775268	chr19:45771532-45775268	0	-	45771532	45771532	8553170	4	133,158,112,320,	0,238,1108,3416,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	45774947	45777037	chr19:45774947-45777037	0	-	45774947	45774947	8553170	2	87,379,	0,1711,
#Deleted in new
chr19	45777565	45777954	chr19:45777565-45777954	0	-	45777565	45777565	8553170	2	25,288,	0,101,
#Deleted in new
chr19	45777693	45778950	chr19:45777693-45778950	0	-	45777693	45777693	8553170	3	180,94,458,	0,433,799,
#Deleted in new
chr19	45777769	45779168	chr19:45777769-45779168	0	-	45777769	45777769	8553170	4	104,94,149,35,	0,357,723,1364,
#Deleted in new
chr19	45778546	45780506	chr19:45778546-45780506	0	-	45778546	45778546	8553170	3	813,84,729,	0,892,1231,
#Deleted in new
chr19	45778634	45780541	chr19:45778634-45780541	0	-	45778634	45780419	789624	5	7,96,84,92,219,	0,629,804,1143,1688,
#Deleted in new
chr19	45778902	45779569	chr19:45778902-45779569	0	-	45778902	45778902	8553170	2	457,131,	0,536,
#Deleted in new
chr19	45779436	45785973	chr19:45779436-45785973	1	-	45779851	45785973	789624	3	86,92,380,	0,341,6157,
#Deleted in new
chr19	45779470	45785713	chr19:45779470-45785713	2	-	45779470	45785713	789624	5	52,92,58,75,120,	0,307,2722,5170,6123,
#Deleted in new
chr19	45779470	45785713	chr19:45779470-45785713	0	-	45780330	45785713	789624	4	52,92,168,120,	0,307,743,6123,
#Deleted in new
chr19	45779471	45785713	chr19:45779471-45785713	0	-	45779471	45785713	789624	4	51,92,58,120,	0,306,2721,6122,
#Partially deleted in new
chr19	45782946	45792802	chr19:45782946-45792802	1	-	45784242	45792756	789624	4	1344,1278,183,487,	0,2647,7958,9369,
#Partially deleted in new
chr19	45783008	45792802	chr19:45783008-45792802	3	-	45784242	45792756	789624	5	1282,75,1278,183,487,	0,1632,2585,7896,9307,
#Deleted in new
chr19	45783938	45785659	chr19:45783938-45785659	0	-	45784586	45785659	789624	2	777,66,	0,1655,
#Deleted in new
chr19	45785255	45785910	chr19:45785255-45785910	0	-	45785425	45785910	789624	1	655,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	45786849	45792773	chr19:45786849-45792773	0	-	45786849	45786849	8553170	3	369,183,458,	0,4055,5466,
#Partially deleted in new
chr19	45789258	45791045	chr19:45789258-45791045	0	-	45789319	45791045	789624	2	229,141,	0,1646,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	45789394	45790176	chr19:45789394-45790176	0	-	45789394	45789394	8553170	1	782,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	45790566	45792437	chr19:45790566-45792437	0	-	45790760	45792437	789624	2	521,122,	0,1749,
#Partially deleted in new
chr19	45795709	45815319	chr19:45795709-45815319	3	-	45795868	45815176	789624	6	397,118,145,765,238,793,	0,4736,6410,8542,14893,18817,
#Partially deleted in new
chr19	45795712	45810931	chr19:45795712-45810931	1	-	45795868	45810698	789624	5	394,118,145,765,329,	0,4733,6407,8539,14890,
#Partially deleted in new
chr19	45795764	45815228	chr19:45795764-45815228	1	-	45795987	45815176	789624	6	338,118,145,765,238,702,	0,4681,6355,8487,14838,18762,
#Partially deleted in new
chr19	45815409	45824161	chr19:45815409-45824161	0	-	45815409	45815409	8553170	10	288,333,96,177,188,102,91,101,109,118,	0,441,1072,1388,2549,5974,7346,7962,8357,8634,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr19	45815427	45863144	chr19:45815427-45863144	0	-	45815427	45815427	8553170	26	270,333,96,177,188,102,91,101,109,161,148,114,1369,151,205,151,155,240,171,250,127,74,54,66,117,87,	0,423,1054,1370,2531,5956,7328,7944,8339,9743,10798,12082,12409,14626,15956,19650,23033,26822,28602,32324,33322,36884,37054,38747,38963,47630,
#Partially deleted in new
chr19	45815434	45863290	chr19:45815434-45863290	3	-	45815559	45854495	0	27	263,333,96,177,188,102,91,101,109,161,148,114,82,236,151,205,151,155,240,171,250,127,74,54,66,117,233,	0,416,1047,1363,2524,5949,7321,7937,8332,9736,10791,12075,12402,13535,14619,15949,19643,23026,26815,28595,32317,33315,36877,37047,38740,38956,47623,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr19	45815447	45855807	chr19:45815447-45855807	0	-	45827583	45854495	789624	26	250,333,96,177,188,102,91,101,109,161,148,114,82,151,151,205,151,155,240,171,250,127,74,54,66,1417,	0,403,1034,1350,2511,5936,7308,7924,8319,9723,10778,12062,12389,13607,14606,15936,19630,23013,26802,28582,32304,33302,36864,37034,38727,38943,
#Deleted in new
chr19	45815467	45817133	chr19:45815467-45817133	0	-	45815467	45815467	8553170	4	230,333,96,336,	0,383,1014,1330,
#Partially deleted in new
chr19	45815895	45818013	chr19:45815895-45818013	0	-	45816560	45818013	789624	4	288,133,177,55,	0,586,902,2063,
#Partially deleted in new
chr19	45816482	45824012	chr19:45816482-45824012	0	-	45816482	45816482	8553170	7	95,177,188,102,91,101,246,	0,315,1476,4901,6273,6889,7284,
#Partially deleted in new
chr19	45818912	45863130	chr19:45818912-45863130	1	-	45821099	45854495	789624	22	2573,91,101,109,161,148,114,82,236,151,205,151,155,240,171,250,127,74,54,66,117,73,	0,3843,4459,4854,6258,7313,8597,8924,10057,11141,12471,16165,19548,23337,25117,28839,29837,33399,33569,35262,35478,44145,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr19	45818954	45855710	chr19:45818954-45855710	1	-	45821099	45854495	789624	21	2531,91,101,109,161,148,114,82,236,151,205,151,155,240,171,250,127,74,54,66,1320,	0,3801,4417,4812,6216,7271,8555,8882,10015,11099,12429,16123,19506,23295,25075,28797,29795,33357,33527,35220,35436,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	45830163	45831108	chr19:45830163-45831108	3	+	45830163	45830163	8553170	2	623,141,	0,804,
#Partially deleted in new
chr19	45831169	45863132	chr19:45831169-45863132	0	-	45831169	45831169	8553170	12	419,151,155,240,171,250,127,74,54,66,117,75,	0,3908,7291,11080,12860,16582,17580,21142,21312,23005,23221,31888,
#Partially deleted in new
chr19	45835095	45843072	chr19:45835095-45843072	0	-	45835095	45835095	8553170	4	133,155,240,30,	0,3365,7154,7947,
#Partially deleted in new
chr19	45838554	45842732	chr19:45838554-45842732	0	-	45838554	45838554	8553170	2	61,483,	0,3695,
#Partially deleted in new
chr19	45838592	45843037	chr19:45838592-45843037	0	-	45838592	45838592	8553170	3	23,240,329,	0,3657,4116,
#Partially deleted in new
chr19	45848749	45862551	chr19:45848749-45862551	0	-	45848749	45854495	789624	6	127,74,54,66,117,65,	0,3562,3732,5425,5641,13737,
#Partially deleted in new
chr19	45848762	45863165	chr19:45848762-45863165	0	-	45848762	45854495	789624	6	114,74,54,66,195,108,	0,3549,3719,5412,5628,14295,
#Partially deleted in new
chr19	45852311	45863142	chr19:45852311-45863142	0	-	45852311	45852311	8553170	4	74,54,333,85,	0,170,1863,10746,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	45854194	45855205	chr19:45854194-45855205	0	-	45854194	45854495	789624	3	46,117,397,	0,196,614,
#Partially deleted in new
chr19	45863988	45872409	chr19:45863988-45872409	0	+	45872104	45872409	789624	2	203,335,	0,8086,
#Partially deleted in new
chr19	45864259	45873797	chr19:45864259-45873797	3	+	45864456	45873058	0	2	266,1723,	0,7815,
#Deleted in new
chr19	45883606	45886170	chr19:45883606-45886170	3	-	45884019	45885774	789624	1	2564,	0,
#Partially deleted in new
chr19	45890019	45902604	chr19:45890019-45902604	3	-	45890622	45901773	789624	3	1304,551,35,	0,11255,12550,
#Deleted in new
chr19	45913213	45914870	chr19:45913213-45914870	3	-	45914276	45914693	789624	1	1657,	0,
#Partially deleted in new
chr19	45933733	45973546	chr19:45933733-45973546	3	-	45939862	45973351	0	4	7212,167,144,280,	0,20046,27276,39533,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	45940893	45962606	chr19:45940893-45962606	0	-	45940893	45953848	789624	4	52,167,144,335,	0,12886,20116,21378,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	45967393	45973309	chr19:45967393-45973309	0	-	45967393	45967393	8553170	2	546,43,	0,5873,
#Partially deleted in new
chr19	45995460	46018615	chr19:45995460-46018615	1	+	46003018	46018387	789624	10	44,159,83,158,162,140,79,58,73,326,	0,7547,7958,11098,12679,21233,21530,21786,22617,22829,
#Partially deleted in new
chr19	45995466	46018616	chr19:45995466-46018616	3	+	46003018	46018387	789624	14	38,159,83,158,162,211,83,170,76,140,79,58,73,327,	0,7541,7952,11092,12673,19582,19878,20587,20851,21227,21524,21780,22611,22823,
#Partially deleted in new
chr19	45995466	46003543	chr19:45995466-46003543	0	+	45995466	45995466	8553170	2	38,536,	0,7541,
#Partially deleted in new
chr19	45995470	46003501	chr19:45995470-46003501	0	+	46003018	46003501	789624	4	34,157,159,83,	0,774,7537,7948,
#Partially deleted in new
chr19	45995478	46015428	chr19:45995478-46015428	0	+	46003018	46006560	789624	6	26,159,158,162,211,84,	0,7529,11080,12661,19570,19866,
#Partially deleted in new
chr19	46003005	46018392	chr19:46003005-46018392	1	+	46003018	46018387	789624	9	161,83,158,162,140,79,58,73,103,	0,413,3553,5134,13688,13985,14241,15072,15284,
#Partially deleted in new
chr19	46003005	46015333	chr19:46003005-46015333	0	+	46003005	46003005	8553170	5	161,83,158,162,285,	0,413,3553,5134,12043,
#Partially deleted in new
chr19	46018378	46021318	chr19:46018378-46021318	0	+	46018378	46018378	8553170	2	54,237,	0,2703,
#Deleted in new
chr19	46018931	46019049	chr19:46018931-46019049	3	+	46018931	46018931	5263520	1	118,	0,
#Partially deleted in new
chr19	46019152	46023065	chr19:46019152-46023065	3	-	46019237	46023021	0	3	267,122,331,	0,373,3582,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	46027653	46030161	chr19:46027653-46030161	3	+	46027653	46027653	8553170	3	390,112,42,	0,493,2466,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	46027868	46028489	chr19:46027868-46028489	1	+	46027868	46027868	8553170	2	175,343,	0,278,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	46039747	46041016	chr19:46039747-46041016	3	-	46039891	46040962	789624	4	189,260,51,73,	0,409,770,1196,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	46057673	46077118	chr19:46057673-46077118	0	-	46057673	46057673	8553170	2	2620,99,	0,19346,
#Partially deleted in new
chr19	46111078	46113863	chr19:46111078-46113863	7	-	46111078	46111078	16724991	2	1042,874,	0,1911,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	46120070	46124674	chr19:46120070-46124674	3	-	46120329	46124649	789624	4	287,271,54,50,	0,3815,4197,4554,
#Partially deleted in new
chr19	46136745	46137547	chr19:46136745-46137547	7	-	46136745	46136745	16724991	1	802,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	46147781	46161289	chr19:46147781-46161289	3	+	46148985	46161088	789624	5	130,213,54,268,220,	0,1043,12633,12832,13288,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	46148242	46161299	chr19:46148242-46161299	1	+	46148278	46161088	789624	4	55,54,268,230,	0,12172,12371,12827,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	46159045	46161298	chr19:46159045-46161298	0	+	46159045	46159045	8553170	3	1423,268,229,	0,1568,2024,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	46160642	46161288	chr19:46160642-46161288	0	+	46160642	46161088	789624	2	239,216,	0,430,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	46189165	46203034	chr19:46189165-46203034	0	-	46189165	46189165	8553170	3	64,35,195,	0,9242,13674,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	46189635	46203062	chr19:46189635-46203062	3	-	46189635	46189635	789624	3	779,35,223,	0,8772,13204,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	46195777	46203083	chr19:46195777-46203083	0	-	46195777	46195777	8553170	3	61,35,244,	0,2630,7062,
#Partially deleted in new
chr19	46196237	46197323	chr19:46196237-46197323	7	+	46196237	46196237	16724991	4	24,55,171,110,	0,621,787,976,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	46198099	46202966	chr19:46198099-46202966	0	-	46198099	46198099	8553170	2	343,127,	0,4740,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	46200786	46203083	chr19:46200786-46203083	0	-	46200786	46200786	8553170	2	60,244,	0,2053,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	46206742	46210088	chr19:46206742-46210088	0	+	46206742	46206742	8553170	1	3346,	0,
#Partially deleted in new
chr19	46210241	46214837	chr19:46210241-46214837	1	+	46210241	46210241	789624	6	28,70,119,221,155,1041,	0,1367,1874,2548,3087,3555,
#Partially deleted in new
chr19	46219422	46219920	chr19:46219422-46219920	7	+	46219422	46219422	16724991	1	498,	0,
#Partially deleted in new
chr19	46228963	46230388	chr19:46228963-46230388	3	-	46228963	46228963	8553170	2	163,95,	0,1330,
#Partially deleted in new
chr19	46229751	46231243	chr19:46229751-46231243	3	+	46229774	46230830	789624	4	48,54,244,423,	0,356,522,1069,
#Partially deleted in new
chr19	46249393	46250163	chr19:46249393-46250163	7	-	46249393	46249393	16724991	3	218,49,19,	0,334,751,
#Partially deleted in new
chr19	46260419	46260858	chr19:46260419-46260858	7	-	46260419	46260419	16724991	2	272,58,	0,381,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	46297045	46331513	chr19:46297045-46331513	0	+	46297045	46297045	8553170	13	57,191,146,85,113,209,107,148,119,191,105,272,358,	0,6852,8199,11175,11617,12105,15115,15460,23397,24730,28489,32161,34110,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	46297045	46343433	chr19:46297045-46343433	3	+	46297076	46339622	0	15	57,191,146,85,113,209,107,148,119,191,105,272,118,82,3909,	0,6852,8199,11175,11617,12105,15115,15460,23397,24730,28489,32161,34110,37859,42479,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	46297045	46313363	chr19:46297045-46313363	0	+	46297045	46297045	8553170	7	57,191,146,85,113,209,1203,	0,6852,8199,11175,11617,12105,15115,
#Partially deleted in new
chr19	46297045	46309266	chr19:46297045-46309266	0	+	46297076	46308249	789624	5	57,191,85,113,116,	0,6852,11175,11617,12105,
#Partially deleted in new
chr19	46298297	46304187	chr19:46298297-46304187	0	+	46298297	46298297	8553170	2	217,290,	0,5600,
#Partially deleted in new
chr19	46298389	46339909	chr19:46298389-46339909	1	+	46303932	46339622	0	14	125,191,85,113,209,107,148,119,191,105,272,118,82,385,	0,5508,9831,10273,10761,13771,14116,22053,23386,27145,30817,32766,36515,41135,
#Partially deleted in new
chr19	46298393	46325594	chr19:46298393-46325594	0	+	46303932	46305298	789624	11	121,191,146,85,113,209,107,148,115,191,60,	0,5504,6851,9827,10269,10757,13767,14112,22053,23382,27141,
#Partially deleted in new
chr19	46298421	46308683	chr19:46298421-46308683	0	+	46303932	46308683	789624	6	93,191,37,146,85,21,	0,5476,6677,6823,9799,10241,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	46298425	46338538	chr19:46298425-46338538	1	+	46303932	46338306	789624	12	89,191,85,113,209,107,148,119,191,105,40,312,	0,5472,9795,10237,10725,13735,14080,22017,23350,27109,36521,39801,
#Partially deleted in new
chr19	46298432	46308586	chr19:46298432-46308586	0	+	46303932	46305298	789624	5	82,191,146,85,35,	0,5465,6812,9788,10119,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	46298457	46331513	chr19:46298457-46331513	0	+	46298457	46298457	8553170	13	57,191,146,85,113,209,107,148,119,191,105,272,358,	0,5440,6787,9763,10205,10693,13703,14048,21985,23318,27077,30749,32698,
#Partially deleted in new
chr19	46303598	46340100	chr19:46303598-46340100	1	+	46303667	46339622	0	15	89,191,146,85,113,209,107,148,119,191,105,272,118,82,576,	0,299,1646,4622,5064,5552,8562,8907,16844,18177,21936,25608,27557,31306,35926,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	46303848	46338538	chr19:46303848-46338538	1	+	46303932	46338306	789624	13	240,85,113,209,107,148,119,191,105,272,118,82,312,	0,4372,4814,5302,8312,8657,16594,17927,21686,25358,27307,31056,34378,
#Partially deleted in new
chr19	46303848	46308767	chr19:46303848-46308767	0	+	46303932	46305298	789624	4	240,146,85,105,	0,1396,4372,4814,
#Partially deleted in new
chr19	46305041	46312518	chr19:46305041-46312518	0	+	46305041	46305041	8553170	7	94,146,85,113,209,107,13,	0,203,3179,3621,4109,7119,7464,
#Partially deleted in new
chr19	46305085	46309196	chr19:46305085-46309196	0	+	46305085	46305085	8553170	4	305,85,113,46,	0,3135,3577,4065,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	46306469	46306577	chr19:46306469-46306577	3	-	46306469	46306469	8553170	1	108,	0,
#Partially deleted in new
chr19	46309220	46312653	chr19:46309220-46312653	0	+	46309220	46310683	789624	4	139,150,107,148,	0,1321,2940,3285,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	46320196	46340004	chr19:46320196-46340004	3	-	46320196	46320196	8553170	2	222,250,	0,19558,
#Partially deleted in new
chr19	46320391	46321918	chr19:46320391-46321918	0	+	46320391	46320391	8553170	2	170,143,	0,1384,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	46321779	46331496	chr19:46321779-46331496	0	+	46321779	46321779	8553170	4	187,105,398,341,	0,3755,7301,9376,
#Partially deleted in new
chr19	46346993	46390852	chr19:46346993-46390852	3	+	46347096	46390346	0	13	224,242,148,122,66,99,106,143,88,41,179,82,569,	0,6754,28610,29459,36417,36786,37810,40099,40372,41414,41559,43057,43290,
#Partially deleted in new
chr19	46347100	46392981	chr19:46347100-46392981	0	+	46347100	46391174	789624	14	117,242,148,122,66,99,106,143,88,41,179,82,108,345,	0,6647,28503,29352,36310,36679,37703,39992,40265,41307,41452,42950,44050,45536,
#Partially deleted in new
chr19	46347107	46390852	chr19:46347107-46390852	1	+	46353944	46390346	789624	12	110,242,148,122,99,106,143,88,41,179,82,569,	0,6640,28496,29345,36672,37696,39985,40258,41300,41445,42943,43176,
#Deleted in new
chr19	46375603	46376703	chr19:46375603-46376703	0	+	46375603	46375603	8553170	2	148,251,	0,849,
#Partially deleted in new
chr19	46375626	46383711	chr19:46375626-46383711	0	+	46375626	46375626	8553170	3	125,122,301,	0,826,7784,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	46381510	46390846	chr19:46381510-46390846	0	+	46381510	46381510	8553170	6	2368,106,143,1083,179,796,	0,3293,5582,5855,7042,8540,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	46381725	46383998	chr19:46381725-46383998	0	+	46381725	46381725	8553170	2	1751,219,	0,2054,
#Deleted in new
chr19	46382491	46383169	chr19:46382491-46383169	3	-	46382491	46382491	8553170	2	33,415,	0,263,
#Partially deleted in new
chr19	46382771	46390746	chr19:46382771-46390746	0	+	46382771	46382771	8553170	8	1107,106,143,88,41,179,82,463,	0,2032,4321,4594,5636,5781,7279,7512,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	46383155	46387935	chr19:46383155-46387935	0	+	46383155	46383155	8553170	5	321,95,106,143,570,	0,628,1648,3937,4210,
#Partially deleted in new
chr19	46383322	46387164	chr19:46383322-46387164	0	+	46383322	46383322	8553170	4	154,99,106,72,	0,457,1481,3770,
#Deleted in new
chr19	46383462	46384943	chr19:46383462-46384943	0	+	46383462	46383462	8553170	2	416,140,	0,1341,
#Partially deleted in new
chr19	46383793	46390286	chr19:46383793-46390286	0	+	46383793	46383793	8553170	7	85,106,143,88,41,179,236,	0,1010,3299,3572,4614,4759,6257,
#Partially deleted in new
chr19	46384376	46388595	chr19:46384376-46388595	0	+	46384376	46384376	8553170	5	533,143,88,41,43,	0,2716,2989,4031,4176,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	46386717	46390675	chr19:46386717-46390675	0	+	46386717	46386717	8553170	6	518,88,41,179,82,392,	0,648,1690,1835,3333,3566,
#Partially deleted in new
chr19	46387925	46390610	chr19:46387925-46390610	0	+	46387925	46387925	8553170	3	806,82,327,	0,2125,2358,
#Deleted in new
chr19	46390514	46390852	chr19:46390514-46390852	3	-	46390514	46390514	8553170	2	74,114,	0,224,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	46410328	46413662	chr19:46410328-46413662	3	-	46411193	46412810	789624	1	3334,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	46410378	46413564	chr19:46410378-46413564	1	-	46411193	46412810	0	1	3186,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	46424696	46428951	chr19:46424696-46428951	3	-	46427744	46428359	789624	1	4255,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	46466490	46471407	chr19:46466490-46471407	1	-	46468538	46471035	789624	3	2087,1177,71,	0,3447,4846,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	46466497	46471563	chr19:46466497-46471563	3	-	46468560	46471035	789624	3	2080,1382,227,	0,3235,4839,
#Partially deleted in new
chr19	46468527	46471563	chr19:46468527-46471563	1	-	46468538	46471035	789624	3	50,295,227,	0,2292,2809,
#Partially deleted in new
chr19	46480795	46600932	chr19:46480795-46600932	0	-	46481383	46600932	789624	4	645,122,148,50,	0,44867,46129,120087,
#Partially deleted in new
chr19	46481084	46490120	chr19:46481084-46490120	0	-	46481084	46481084	8553170	2	356,255,	0,8781,
#Partially deleted in new
chr19	46486905	46495879	chr19:46486905-46495879	0	-	46486905	46486905	8553170	2	198,165,	0,8809,
#Deleted in new
chr19	46491190	46496498	chr19:46491190-46496498	3	-	46493557	46495465	789624	1	5308,	0,
#Deleted in new
chr19	46494507	46496502	chr19:46494507-46496502	3	+	46494507	46494507	8553170	1	1995,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	46518678	46601200	chr19:46518678-46601200	3	-	46519813	46600969	789624	4	1294,122,148,318,	0,6984,8246,82204,
#Partially deleted in new
chr19	46525475	46600931	chr19:46525475-46600931	0	-	46525587	46600931	789624	3	309,148,49,	0,1449,75407,
#Partially deleted in new
chr19	46533668	46534351	chr19:46533668-46534351	7	+	46533668	46533668	16724991	1	683,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	46547055	46600861	chr19:46547055-46600861	3	-	46547055	46547055	8553170	5	86,119,90,115,85,	0,29543,42090,42508,53721,
#Partially deleted in new
chr19	46558640	46559642	chr19:46558640-46559642	7	+	46558640	46558640	16724991	1	1002,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	46568077	46589154	chr19:46568077-46589154	1	-	46568077	46568077	8553170	3	350,119,9,	0,8521,21068,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	46598148	46600925	chr19:46598148-46600925	0	-	46598148	46598148	8553170	1	2777,	0,
#Deleted in new
chr19	46601073	46609305	chr19:46601073-46609305	1	+	46608270	46609153	789624	6	103,31,144,107,136,181,	0,4753,7123,7408,7772,8051,
#Deleted in new
chr19	46601235	46610793	chr19:46601235-46610793	3	+	46601434	46609153	789624	6	202,31,144,107,136,1669,	0,4591,6961,7246,7610,7889,
#Deleted in new
chr19	46601275	46609319	chr19:46601275-46609319	1	+	46601434	46609153	789624	5	162,31,131,58,195,	0,4551,6921,7648,7849,
#Deleted in new
chr19	46601308	46609275	chr19:46601308-46609275	0	+	46601308	46601308	8553170	6	129,31,142,107,136,151,	0,4518,6890,7173,7537,7816,
#Deleted in new
chr19	46601329	46609190	chr19:46601329-46609190	1	+	46608270	46609153	789624	5	108,144,107,136,66,	0,6867,7152,7516,7795,
#Deleted in new
chr19	46601363	46606342	chr19:46601363-46606342	0	+	46601363	46601363	8553170	2	74,516,	0,4463,
#Deleted in new
chr19	46601365	46609182	chr19:46601365-46609182	1	+	46608270	46609153	789624	6	72,31,136,107,136,58,	0,4461,6839,7116,7480,7759,
#Deleted in new
chr19	46601366	46609305	chr19:46601366-46609305	0	+	46601366	46601366	8553170	5	71,31,144,500,181,	0,4460,6830,7115,7758,
#Deleted in new
chr19	46602068	46609996	chr19:46602068-46609996	1	+	46608270	46609153	789624	7	22,43,31,144,107,136,872,	0,528,3758,6128,6413,6777,7056,
#Deleted in new
chr19	46602071	46609770	chr19:46602071-46609770	1	+	46602207	46609153	789624	6	139,31,144,107,136,646,	0,3755,6125,6410,6774,7053,
#Deleted in new
chr19	46605192	46609243	chr19:46605192-46609243	0	+	46605192	46605192	8553170	6	113,31,144,107,136,119,	0,634,3004,3289,3653,3932,
#Deleted in new
chr19	46607961	46610781	chr19:46607961-46610781	0	+	46607961	46607961	8553170	3	379,500,1657,	0,520,1163,
#Deleted in new
chr19	46607972	46609234	chr19:46607972-46609234	0	+	46607972	46607972	8553170	4	368,107,136,110,	0,509,873,1152,
#Deleted in new
chr19	46609276	46610779	chr19:46609276-46610779	3	-	46609276	46609276	8553170	2	102,194,	0,1309,
#Partially deleted in new
chr19	46620467	46625118	chr19:46620467-46625118	3	-	46621279	46624225	789624	3	1205,780,122,	0,2990,4529,
#Partially deleted in new
chr19	46621166	46625072	chr19:46621166-46625072	1	-	46621279	46623496	789624	3	506,117,76,	0,2291,3830,
#Partially deleted in new
chr19	46621166	46625072	chr19:46621166-46625072	1	-	46621279	46621627	789624	2	655,120,	0,3786,
#Partially deleted in new
chr19	46621166	46625072	chr19:46621166-46625072	1	-	46621279	46623589	789624	3	506,142,76,	0,2291,3830,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	46622721	46624747	chr19:46622721-46624747	0	-	46622721	46622721	8553170	1	2026,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	46623129	46625037	chr19:46623129-46625037	1	-	46623194	46624225	789624	3	188,780,41,	0,328,1867,
#Deleted in new
chr19	46634075	46634685	chr19:46634075-46634685	3	-	46634075	46634682	789624	2	129,87,	0,523,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	46636809	46639161	chr19:46636809-46639161	3	-	46636809	46636809	8553170	1	2352,	0,
#Partially deleted in new
chr19	46647611	46654657	chr19:46647611-46654657	1	-	46648481	46649696	789624	4	2261,153,97,15,	0,5048,5367,7031,
#Partially deleted in new
chr19	46647611	46661138	chr19:46647611-46661138	3	-	46648481	46661064	789624	4	2261,153,97,323,	0,5048,5367,13204,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	46650147	46661138	chr19:46650147-46661138	1	-	46652612	46661064	789624	3	2665,97,323,	0,2831,10668,
#Partially deleted in new
chr19	46660363	46677447	chr19:46660363-46677447	3	+	46660363	46660363	789624	3	45,143,308,	0,8804,16776,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	46661477	46671341	chr19:46661477-46671341	1	+	46661477	46661477	789624	3	960,143,201,	0,7690,9663,
#Partially deleted in new
chr19	46661984	46673636	chr19:46661984-46673636	0	+	46661984	46661984	8553170	2	213,168,	0,11484,
#Partially deleted in new
chr19	46674274	46717082	chr19:46674274-46717082	1	-	46674522	46710946	0	19	461,86,268,99,162,107,73,53,259,78,118,154,78,223,155,132,139,129,132,	0,758,4121,7375,15262,16325,17460,17658,19600,22882,23458,26524,26760,29894,30220,36632,39588,41856,42676,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	46674313	46691985	chr19:46674313-46691985	0	-	46685455	46691985	789624	9	422,86,268,99,97,162,107,73,53,	0,719,4082,7336,11111,15223,16286,17421,17619,
#Partially deleted in new
chr19	46674315	46716596	chr19:46674315-46716596	1	-	46674522	46716370	0	18	420,86,268,99,162,107,73,53,259,78,118,154,78,223,155,132,139,466,	0,717,4080,7334,15221,16284,17419,17617,19559,22841,23417,26483,26719,29853,30179,36591,39547,41815,
#Partially deleted in new
chr19	46674316	46717127	chr19:46674316-46717127	3	-	46674522	46716370	0	19	419,86,268,99,162,107,73,53,259,78,118,154,78,223,155,132,139,405,313,	0,716,4079,7333,15220,16283,17418,17616,19558,22840,23416,26482,26718,29852,30178,36590,39546,41814,42498,
#Partially deleted in new
chr19	46674318	46689709	chr19:46674318-46689709	0	-	46674318	46674318	8553170	5	417,86,268,99,173,	0,714,4077,7331,15218,
#Partially deleted in new
chr19	46674319	46714324	chr19:46674319-46714324	1	-	46674522	46710946	0	17	416,86,268,99,162,107,73,53,259,78,118,154,78,223,155,132,462,	0,713,4076,7330,15217,16280,17415,17613,19555,22837,23413,26479,26715,29849,30175,36587,39543,
#Partially deleted in new
chr19	46674338	46697325	chr19:46674338-46697325	0	-	46674338	46674338	8553170	10	397,86,298,99,162,107,73,53,259,169,	0,694,4027,7311,15198,16261,17396,17594,19536,22818,
#Partially deleted in new
chr19	46674345	46697341	chr19:46674345-46697341	0	-	46674345	46674345	8553170	10	390,86,268,99,162,107,73,53,259,185,	0,687,4050,7304,15191,16254,17389,17587,19529,22811,
#Partially deleted in new
chr19	46674507	46717115	chr19:46674507-46717115	1	-	46674522	46716370	0	19	228,86,298,99,162,107,73,53,259,78,118,154,78,223,155,132,139,405,165,	0,525,3858,7142,15029,16092,17227,17425,19367,22649,23225,26291,26527,29661,29987,36399,39355,41623,42443,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	46678528	46686180	chr19:46678528-46686180	0	-	46678528	46678528	8553170	3	135,99,756,	0,3121,6896,
#Partially deleted in new
chr19	46681682	46691851	chr19:46681682-46691851	0	-	46681682	46681682	8553170	4	66,162,107,117,	0,7854,8917,10052,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	46688796	46689068	chr19:46688796-46689068	3	-	46688796	46688796	8553170	1	272,	0,
#Partially deleted in new
chr19	46697839	46714023	chr19:46697839-46714023	0	-	46697839	46710946	789624	5	11,154,78,132,161,	0,2959,3195,13067,16023,
#Partially deleted in new
chr19	46704336	46716244	chr19:46704336-46716244	0	-	46710930	46716244	789624	4	55,155,132,114,	0,158,6570,11794,
#Partially deleted in new
chr19	46704486	46714599	chr19:46704486-46714599	0	-	46704486	46710946	789624	4	163,132,139,190,	0,6420,9376,9923,
#Partially deleted in new
chr19	46704633	46717114	chr19:46704633-46717114	0	-	46704633	46710946	789624	5	16,132,139,90,164,	0,6273,9229,11497,12317,
#Deleted in new
chr19	46709292	46709345	chr19:46709292-46709345	3	-	46709292	46709292	5263520	1	53,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	46710353	46714032	chr19:46710353-46714032	0	-	46710353	46710353	8553170	2	685,170,	0,3509,
#Deleted in new
chr19	46716164	46717112	chr19:46716164-46717112	0	-	46716164	46716370	789624	2	371,298,	0,650,
#Partially deleted in new
chr19	46719506	46746480	chr19:46719506-46746480	3	-	46720601	46746430	789624	18	832,236,87,99,141,171,122,48,176,95,114,160,142,198,79,74,104,332,	0,1029,2479,2735,3303,3607,5300,5825,5966,7945,8387,9111,11225,13532,17316,18657,19278,26642,
#Partially deleted in new
chr19	46719510	46746881	chr19:46719510-46746881	1	-	46720601	46746430	789624	18	828,236,87,99,141,171,122,48,176,116,114,160,142,198,79,74,104,733,	0,1025,2475,2731,3299,3603,5296,5821,5962,7941,8383,9107,11221,13528,17312,18653,19274,26638,
#Partially deleted in new
chr19	46719512	46726265	chr19:46719512-46726265	0	-	46719512	46719512	8553170	8	826,236,355,141,171,122,48,793,	0,1023,2473,3297,3601,5294,5819,5960,
#Deleted in new
chr19	46719512	46721752	chr19:46719512-46721752	0	-	46719512	46719512	8553170	1	2240,	0,
#Partially deleted in new
chr19	46720070	46746994	chr19:46720070-46746994	1	-	46720601	46738813	789624	19	268,236,87,99,141,171,122,48,176,95,114,160,142,198,79,74,104,63,231,	0,465,1915,2171,2739,3043,4736,5261,5402,7381,7823,8547,10661,12968,16752,18093,18714,26078,26693,
#Deleted in new
chr19	46720408	46723211	chr19:46720408-46723211	0	-	46720601	46723211	789624	5	363,87,99,141,98,	0,1577,1833,2401,2705,
#Partially deleted in new
chr19	46720698	46730857	chr19:46720698-46730857	0	-	46720698	46720698	8553170	11	73,355,141,171,122,48,176,116,114,160,126,	0,1287,2111,2415,4108,4633,4774,6753,7195,7919,10033,
#Partially deleted in new
chr19	46722337	46727959	chr19:46722337-46727959	0	-	46722337	46727959	789624	8	3,141,171,122,48,160,240,66,	0,472,776,2469,2994,3135,5114,5556,
#Partially deleted in new
chr19	46722859	46728315	chr19:46722859-46728315	0	-	46722859	46722859	8553170	7	91,171,122,48,176,95,422,	0,254,1947,2472,2613,4592,5034,
#Partially deleted in new
chr19	46722922	46724892	chr19:46722922-46724892	0	-	46722922	46722922	8553170	2	362,86,	0,1884,
#Partially deleted in new
chr19	46722933	46728406	chr19:46722933-46728406	0	-	46722933	46722933	8553170	8	17,171,122,48,176,95,114,107,	0,180,1873,2398,2539,4518,4960,5366,
#Partially deleted in new
chr19	46724827	46738172	chr19:46724827-46738172	0	-	46725640	46738172	789624	10	101,48,176,240,114,160,142,198,79,9,	0,504,645,2624,3066,3790,5904,8211,11995,13336,
#Partially deleted in new
chr19	46725480	46728331	chr19:46725480-46728331	0	-	46725480	46725480	8553170	4	168,240,114,32,	0,1971,2413,2819,
#Deleted in new
chr19	46727452	46730931	chr19:46727452-46730931	0	-	46727452	46727452	8553170	4	94,114,160,200,	0,441,1165,3279,
#Deleted in new
chr19	46727906	46733449	chr19:46727906-46733449	0	-	46727906	46727906	8553170	4	101,160,142,411,	0,711,2825,5132,
#Deleted in new
chr19	46728602	46732700	chr19:46728602-46732700	3	+	46728602	46728602	8553170	3	251,169,142,	0,3505,3956,
#Deleted in new
chr19	46728684	46731788	chr19:46728684-46731788	0	-	46728684	46728684	8553170	3	93,142,321,	0,2047,2783,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	46728686	46736349	chr19:46728686-46736349	0	-	46728686	46728686	8553170	4	91,142,198,200,	0,2045,4352,7463,
#Partially deleted in new
chr19	46730732	46746405	chr19:46730732-46746405	0	-	46733847	46746405	789624	7	141,198,60,79,74,104,257,	0,2306,3083,6090,7431,8052,15416,
#Partially deleted in new
chr19	46730835	46746945	chr19:46730835-46746945	0	-	46730835	46738813	789624	6	38,198,79,74,104,182,	0,2203,5987,7328,7949,15928,
#Partially deleted in new
chr19	46733074	46745830	chr19:46733074-46745830	0	-	46733074	46738813	789624	6	162,79,74,104,77,74,	0,3748,5089,5710,6235,12682,
#Partially deleted in new
chr19	46733109	46739507	chr19:46733109-46739507	0	-	46733109	46738813	789624	5	127,79,74,104,198,	0,3713,5054,5675,6200,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	46736204	46746944	chr19:46736204-46746944	0	-	46736204	46736204	8553170	6	64,79,74,104,63,181,	0,618,1959,2580,9944,10559,
#Deleted in new
chr19	46736311	46736419	chr19:46736311-46736419	3	+	46736311	46736311	8553170	1	108,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	46746045	46758485	chr19:46746045-46758485	3	+	46755450	46756938	789624	4	45,62,151,3074,	0,1981,2469,9366,
#Partially deleted in new
chr19	46746045	46755792	chr19:46746045-46755792	0	+	46746045	46746045	8553170	4	45,62,203,258,	0,1981,2469,9489,
#Partially deleted in new
chr19	46746045	46755937	chr19:46746045-46755937	0	+	46755450	46755937	789624	3	45,62,526,	0,1981,9366,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	46746056	46757913	chr19:46746056-46757913	1	+	46755450	46756938	789624	4	34,62,203,2502,	0,1970,2458,9355,
#Partially deleted in new
chr19	46746056	46755709	chr19:46746056-46755709	0	+	46755450	46755709	789624	4	30,62,203,298,	0,1970,2458,9355,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	46746056	46748963	chr19:46746056-46748963	0	+	46746056	46746056	8553170	3	34,62,449,	0,1970,2458,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	46746056	46755537	chr19:46746056-46755537	0	+	46755450	46755537	789624	4	34,62,370,126,	0,1970,2458,9355,
#Partially deleted in new
chr19	46746056	46776988	chr19:46746056-46776988	0	+	46746056	46746056	8553170	4	34,62,151,337,	0,1970,2458,30595,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	46746056	46755449	chr19:46746056-46755449	0	+	46746056	46746056	8553170	5	34,72,62,370,38,	0,1177,1970,2458,9355,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	46746057	46755753	chr19:46746057-46755753	0	+	46755450	46755753	789624	4	33,154,62,342,	0,1521,1969,9354,
#Partially deleted in new
chr19	46746057	46755984	chr19:46746057-46755984	0	+	46755879	46755984	789624	3	33,62,450,	0,1969,9477,
#Partially deleted in new
chr19	46746057	46755660	chr19:46746057-46755660	0	+	46755450	46755660	789624	5	33,61,62,151,249,	0,1176,1969,2457,9354,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	46746057	46762006	chr19:46746057-46762006	0	+	46746057	46746057	8553170	4	33,62,151,174,	0,1969,2457,15775,
#Partially deleted in new
chr19	46746057	46755792	chr19:46746057-46755792	0	+	46755450	46755792	789624	4	33,72,62,381,	0,1176,1969,9354,
#Partially deleted in new
chr19	46746057	46755768	chr19:46746057-46755768	0	+	46755450	46755768	789624	4	33,62,107,357,	0,1969,2457,9354,
#Partially deleted in new
chr19	46746057	46755690	chr19:46746057-46755690	0	+	46755450	46755690	789624	5	33,72,62,151,279,	0,1176,1969,2457,9354,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	46746057	46748802	chr19:46746057-46748802	0	+	46746057	46746057	8553170	3	33,62,288,	0,1969,2457,
#Partially deleted in new
chr19	46746057	46754025	chr19:46746057-46754025	0	+	46746057	46746057	8553170	5	33,72,62,203,190,	0,1176,1969,2457,7778,
#Partially deleted in new
chr19	46746057	46755737	chr19:46746057-46755737	0	+	46755450	46755737	789624	4	33,61,62,326,	0,1176,1969,9354,
#Partially deleted in new
chr19	46746057	46755610	chr19:46746057-46755610	0	+	46755450	46755610	789624	5	33,72,62,203,199,	0,1176,1969,2457,9354,
#Partially deleted in new
chr19	46746909	46755666	chr19:46746909-46755666	0	+	46755450	46755666	789624	4	83,62,151,255,	0,1117,1605,8502,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	46747658	46755463	chr19:46747658-46755463	0	+	46755450	46755463	8553170	3	430,151,52,	0,856,7753,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	46748757	46755861	chr19:46748757-46755861	0	+	46755450	46755861	789624	2	127,450,	0,6654,
#Partially deleted in new
chr19	46774882	46788594	chr19:46774882-46788594	3	-	46775509	46787965	0	8	865,135,195,234,167,48,43,1195,	0,2092,2328,3792,7500,9214,9634,12517,
#Partially deleted in new
chr19	46774884	46784824	chr19:46774884-46784824	1	-	46775509	46784597	0	7	863,135,195,234,167,48,230,	0,2090,2326,3790,7498,9212,9710,
#Partially deleted in new
chr19	46774884	46784905	chr19:46774884-46784905	1	-	46775509	46784597	789624	7	863,135,195,234,167,48,389,	0,2090,2326,3790,7498,9212,9632,
#Partially deleted in new
chr19	46774923	46787342	chr19:46774923-46787342	1	-	46775509	46782522	0	8	824,135,195,234,167,48,43,104,	0,2051,2287,3751,7459,9173,9593,12315,
#Partially deleted in new
chr19	46777210	46784786	chr19:46777210-46784786	0	-	46777210	46784786	789624	6	195,234,167,48,43,87,	0,1464,5172,6886,7306,7489,
#Partially deleted in new
chr19	46782435	46784803	chr19:46782435-46784803	0	-	46782435	46782522	789624	4	114,48,43,71,	0,1661,2081,2297,
#Partially deleted in new
chr19	46787814	46789039	chr19:46787814-46789039	0	+	46787814	46787814	8553170	1	1225,	0,
#Partially deleted in new
chr19	46787814	46789043	chr19:46787814-46789043	3	+	46787814	46787814	8553170	1	1229,	0,
#Deleted in new
chr19	46809582	46810182	chr19:46809582-46810182	7	+	46809582	46809582	16724991	1	600,	0,
#Deleted in new
chr19	46809584	46810183	chr19:46809584-46810183	7	+	46809584	46809584	16724991	1	599,	0,
#Partially deleted in new
chr19	46826894	46828440	chr19:46826894-46828440	7	-	46826894	46826894	16724991	2	220,64,	0,1482,
#Partially deleted in new
chr19	46838135	46850777	chr19:46838135-46850777	1	-	46838446	46850766	789624	5	413,60,156,150,14,	0,604,1329,7857,12628,
#Partially deleted in new
chr19	46838157	46850834	chr19:46838157-46850834	1	-	46838446	46850766	789624	4	391,60,114,71,	0,582,1307,12606,
#Partially deleted in new
chr19	46838157	46850769	chr19:46838157-46850769	1	-	46838446	46850664	789624	5	391,60,114,150,114,	0,582,1307,7835,12498,
#Partially deleted in new
chr19	46838157	46850316	chr19:46838157-46850316	1	-	46838446	46850184	789624	5	391,60,114,150,183,	0,582,1307,7835,11976,
#Partially deleted in new
chr19	46838166	46850992	chr19:46838166-46850992	3	-	46838446	46850766	789624	5	382,60,114,150,229,	0,573,1298,7826,12597,
#Partially deleted in new
chr19	46838171	46846148	chr19:46838171-46846148	1	-	46838446	46846085	789624	4	377,60,114,156,	0,568,1293,7821,
#Deleted in new
chr19	46838171	46838820	chr19:46838171-46838820	0	-	46838171	46838171	8553170	2	377,81,	0,568,
#Partially deleted in new
chr19	46838445	46839656	chr19:46838445-46839656	0	-	46838445	46838445	8553170	3	103,60,192,	0,294,1019,
#Partially deleted in new
chr19	46838446	46850766	chr19:46838446-46850766	1	-	46838446	46850766	789624	4	102,60,150,3,	0,293,7546,12317,
#Partially deleted in new
chr19	46845650	46850825	chr19:46845650-46850825	0	-	46845650	46845650	8553170	2	492,62,	0,5113,
#Partially deleted in new
chr19	46918675	47005077	chr19:46918675-47005077	3	+	46918675	47000688	0	6	3681,145,78,132,106,4747,	0,18588,69313,70868,80628,81655,
#Partially deleted in new
chr19	46918675	47004307	chr19:46918675-47004307	1	+	46918675	47000688	0	7	3681,145,78,132,106,1384,2170,	0,18588,69313,70868,80628,81655,83462,
#Partially deleted in new
chr19	46937319	47001425	chr19:46937319-47001425	0	+	46937319	46937319	8553170	4	89,1687,106,1095,	0,50669,61984,63011,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	46946534	46949156	chr19:46946534-46949156	3	+	46946534	46946534	8553170	1	2622,	0,
#Partially deleted in new
chr19	46989583	46997750	chr19:46989583-46997750	0	+	46989583	46989583	8553170	2	92,254,	0,7913,
#Deleted in new
chr19	46999084	46999815	chr19:46999084-46999815	0	+	46999084	46999084	8553170	2	60,512,	0,219,
#Deleted in new
chr19	46999097	47000949	chr19:46999097-47000949	0	+	46999097	46999097	8553170	2	312,619,	0,1233,
#Partially deleted in new
chr19	47019819	47045775	chr19:47019819-47045775	3	+	47021047	47045651	789624	12	178,164,236,74,90,166,116,158,107,148,95,585,	0,1186,1792,12458,12823,16144,19216,19587,20624,21158,22990,25371,
#Partially deleted in new
chr19	47019848	47045727	chr19:47019848-47045727	1	+	47035969	47045651	789624	10	149,74,90,166,116,161,107,148,95,537,	0,12429,12794,16115,19187,19555,20595,21129,22961,25342,
#Partially deleted in new
chr19	47020885	47045759	chr19:47020885-47045759	1	+	47021047	47045651	789624	11	284,236,74,90,166,116,158,107,148,95,569,	0,726,11392,11757,15078,18150,18521,19558,20092,21924,24305,
#Partially deleted in new
chr19	47035328	47045758	chr19:47035328-47045758	1	+	47035969	47042872	789624	8	30,166,116,158,107,101,95,568,	0,635,3707,4078,5115,5696,7481,9862,
#Partially deleted in new
chr19	47035331	47040758	chr19:47035331-47040758	0	+	47035331	47035331	8553170	3	27,270,315,	0,528,5112,
#Partially deleted in new
chr19	47035347	47041125	chr19:47035347-47041125	0	+	47035969	47041125	789624	6	11,270,116,158,107,101,	0,512,3688,4059,5096,5677,
#Partially deleted in new
chr19	47035349	47042877	chr19:47035349-47042877	0	+	47035969	47040998	789624	5	9,166,107,148,68,	0,614,5094,5628,7460,
#Partially deleted in new
chr19	47035888	47040733	chr19:47035888-47040733	0	+	47035888	47035888	8553170	4	241,75,158,290,	0,3188,3518,4555,
#Partially deleted in new
chr19	47045906	47048630	chr19:47045906-47048630	3	-	47045986	47048614	789624	3	346,93,224,	0,686,2500,
#Partially deleted in new
chr19	47064186	47113752	chr19:47064186-47113752	3	-	47066355	47112584	0	15	3683,252,344,362,110,112,111,140,97,155,223,111,220,166,33,	0,4905,7591,8165,17326,17997,20158,20869,21131,22197,25780,29783,30202,48237,49533,
#Partially deleted in new
chr19	47064191	47085355	chr19:47064191-47085355	0	-	47066355	47085355	789624	8	3678,344,362,110,112,111,140,38,	0,7586,8160,17321,17992,20153,20864,21126,
#Partially deleted in new
chr19	47064858	47112229	chr19:47064858-47112229	0	-	47064858	47064858	8553170	7	2463,63,97,223,111,220,82,	0,20274,20459,25108,29111,29530,47289,
#Partially deleted in new
chr19	47090018	47112247	chr19:47090018-47112247	0	-	47090018	47090018	8553170	5	171,111,220,62,100,	0,3951,4370,20876,22129,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	47093748	47094487	chr19:47093748-47094487	0	-	47093748	47093748	8553170	2	332,99,	0,640,
#Partially deleted in new
chr19	47113440	47153000	chr19:47113440-47153000	0	+	47143587	47153000	789624	5	85,235,112,174,103,	0,11655,30053,36761,39457,
#Partially deleted in new
chr19	47130781	47155177	chr19:47130781-47155177	0	+	47143587	47155177	789624	5	77,112,174,143,64,	0,12712,19420,22116,24332,
#Partially deleted in new
chr19	47130828	47210636	chr19:47130828-47210636	1	+	47130930	47209325	0	7	200,112,174,143,100,106,1478,	0,12665,19373,22069,24285,38989,78330,
#Partially deleted in new
chr19	47130829	47169902	chr19:47130829-47169902	0	+	47142609	47169902	789624	7	29,101,112,174,143,100,85,	0,11681,12664,19372,22068,24284,38988,
#Partially deleted in new
chr19	47130837	47210191	chr19:47130837-47210191	1	+	47130930	47209251	789624	7	191,112,174,106,145,70,1033,	0,12656,19364,38980,66395,72833,78321,
#Partially deleted in new
chr19	47130858	47210191	chr19:47130858-47210191	0	+	47130930	47197241	789624	10	170,112,174,143,100,106,158,145,70,1033,	0,12635,19343,22039,24255,38959,49287,66374,72812,78300,
#Partially deleted in new
chr19	47130860	47153038	chr19:47130860-47153038	0	+	47150303	47153038	789624	3	168,174,141,	0,19341,22037,
#Partially deleted in new
chr19	47130862	47210191	chr19:47130862-47210191	3	+	47130930	47209251	0	9	166,112,174,143,100,106,145,70,1033,	0,12631,19339,22035,24251,38955,66370,72808,78296,
#Partially deleted in new
chr19	47130888	47210190	chr19:47130888-47210190	0	+	47130930	47131083	789624	9	224,112,174,143,100,106,145,70,1032,	0,12605,19313,22009,24225,38929,66344,72782,78270,
#Partially deleted in new
chr19	47130894	47210170	chr19:47130894-47210170	1	+	47130930	47203738	0	8	134,112,174,143,100,106,70,1012,	0,12599,19307,22003,24219,38923,72776,78264,
#Deleted in new
chr19	47220821	47222568	chr19:47220821-47222568	0	-	47220821	47220821	8553170	1	1747,	0,
#Partially deleted in new
chr19	47220823	47232766	chr19:47220823-47232766	1	-	47221700	47232602	789624	2	1095,252,	0,11691,
#Partially deleted in new
chr19	47220823	47232766	chr19:47220823-47232766	1	-	47221801	47232602	0	3	1095,191,252,	0,5740,11691,
#Partially deleted in new
chr19	47220823	47232766	chr19:47220823-47232766	1	-	47221700	47232602	789624	4	1095,191,289,252,	0,5740,7334,11691,
#Partially deleted in new
chr19	47220826	47231194	chr19:47220826-47231194	3	-	47221801	47228431	0	4	1092,191,289,266,	0,5737,7331,10102,
#Partially deleted in new
chr19	47221644	47227189	chr19:47221644-47227189	0	-	47221644	47221644	8553170	2	274,626,	0,4919,
#Deleted in new
chr19	47226941	47227021	chr19:47226941-47227021	3	+	47226941	47226941	5263520	1	80,	0,
#Deleted in new
chr19	47226943	47227019	chr19:47226943-47227019	3	-	47226943	47226943	5263520	1	76,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	47255979	47256597	chr19:47255979-47256597	0	+	47255979	47255979	8553170	2	379,75,	0,543,
#Partially deleted in new
chr19	47256458	47271953	chr19:47256458-47271953	3	+	47258400	47271678	789624	12	151,74,105,102,252,84,174,182,47,136,106,680,	0,1871,2100,3862,4129,8144,8314,10152,13948,14094,14623,14815,
#Partially deleted in new
chr19	47256522	47273701	chr19:47256522-47273701	1	+	47258400	47273460	789624	14	87,74,105,102,252,84,174,182,47,136,106,376,93,345,	0,1807,2036,3798,4065,8080,8250,10088,13884,14030,14559,14751,15546,16834,
#Partially deleted in new
chr19	47257531	47260762	chr19:47257531-47260762	0	+	47258400	47260762	789624	5	378,74,105,102,175,	0,798,1027,2789,3056,
#Partially deleted in new
chr19	47257539	47260382	chr19:47257539-47260382	0	+	47258400	47260382	789624	4	115,74,105,62,	0,790,1019,2781,
#Partially deleted in new
chr19	47258088	47260357	chr19:47258088-47260357	0	+	47258400	47260357	789624	3	315,105,37,	0,470,2232,
#Partially deleted in new
chr19	47266294	47270587	chr19:47266294-47270587	0	+	47266294	47266294	8553170	3	498,47,35,	0,4112,4258,
#Deleted in new
chr19	47274452	47275707	chr19:47274452-47275707	3	+	47274919	47275348	789624	1	1255,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	47290022	47307754	chr19:47290022-47307754	0	+	47290022	47290022	8553170	4	39,196,142,30,	0,1955,17346,17702,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	47297074	47320186	chr19:47297074-47320186	0	+	47320134	47320186	789624	4	118,142,115,406,	0,10294,19394,22706,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	47309873	47322066	chr19:47309873-47322066	3	+	47309895	47320830	0	2	25,2286,	0,9907,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	47332146	47347327	chr19:47332146-47347327	3	+	47340799	47341813	789624	2	203,6543,	0,8638,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	47337113	47342015	chr19:47337113-47342015	1	+	47340799	47341813	789624	2	56,1231,	0,3671,
#Partially deleted in new
chr19	47349280	47382704	chr19:47349280-47382704	3	+	47353030	47382113	789624	17	72,982,312,255,103,218,175,194,102,243,174,118,107,276,177,139,725,	0,3473,5758,8585,10687,13195,17700,23449,24318,26185,26643,27162,27819,30429,31535,31905,32699,
#Partially deleted in new
chr19	47358013	47372770	chr19:47358013-47372770	0	+	47358013	47358013	8553170	4	107,103,175,41,	0,1954,8967,14716,
#Partially deleted in new
chr19	47367112	47381571	chr19:47367112-47381571	0	+	47367112	47367112	8553170	7	43,194,102,243,1283,276,756,	0,5617,6486,8353,8811,12597,13703,
#Partially deleted in new
chr19	47372796	47382279	chr19:47372796-47382279	0	+	47372796	47376967	789624	11	127,102,243,174,118,75,107,276,177,139,300,	0,802,2669,3127,3646,4118,4303,6913,8019,8389,9183,
#Partially deleted in new
chr19	47403123	47419523	chr19:47403123-47419523	1	-	47406476	47419081	789624	13	430,67,84,59,215,149,112,99,51,51,160,173,454,	0,3336,3764,3955,4228,5975,6312,11593,11927,13528,13680,14054,15946,
#Partially deleted in new
chr19	47403123	47419315	chr19:47403123-47419315	1	-	47406476	47419081	789624	13	430,67,84,59,77,149,112,99,51,51,160,173,246,	0,3336,3764,3955,4228,5975,6312,11593,11927,13528,13680,14054,15946,
#Partially deleted in new
chr19	47403123	47418801	chr19:47403123-47418801	0	-	47403123	47403123	8553170	13	430,67,84,59,77,149,112,150,51,51,160,173,632,	0,3336,3764,3955,4228,5975,6312,11593,11927,13528,13680,14054,15046,
#Partially deleted in new
chr19	47403124	47414938	chr19:47403124-47414938	0	-	47406476	47414938	789624	8	429,67,84,59,77,149,112,222,	0,3335,3763,3954,4227,5974,6311,11592,
#Partially deleted in new
chr19	47403124	47417792	chr19:47403124-47417792	1	-	47406476	47417747	789624	13	429,67,84,59,77,149,112,150,51,51,160,173,321,	0,3335,3763,3954,4227,5974,6311,11592,11926,13527,13679,14053,14347,
#Partially deleted in new
chr19	47403125	47419288	chr19:47403125-47419288	3	-	47406476	47419081	789624	13	428,67,84,59,215,149,112,150,51,51,160,173,219,	0,3334,3762,3953,4226,5973,6310,11591,11925,13526,13678,14052,15944,
#Partially deleted in new
chr19	47403127	47412387	chr19:47403127-47412387	0	-	47403127	47403127	8553170	7	426,84,59,77,149,112,153,	0,3760,3951,4224,5971,6308,9107,
#Partially deleted in new
chr19	47403171	47419269	chr19:47403171-47419269	1	-	47406476	47419081	789624	13	382,67,84,59,77,149,112,150,51,51,160,173,200,	0,3288,3716,3907,4180,5927,6264,11545,11879,13480,13632,14006,15898,
#Partially deleted in new
chr19	47405955	47419122	chr19:47405955-47419122	1	-	47406476	47419081	789624	12	571,84,59,215,149,112,150,51,51,160,173,53,	0,932,1123,1396,3143,3480,8761,9095,10696,10848,11222,13114,
#Partially deleted in new
chr19	47407097	47409152	chr19:47407097-47409152	0	-	47407097	47409152	789624	3	40,284,54,	0,254,2001,
#Partially deleted in new
chr19	47407468	47416725	chr19:47407468-47416725	0	-	47407468	47416725	789624	5	98,149,112,99,74,	0,1630,1967,7248,9183,
#Partially deleted in new
chr19	47414835	47419152	chr19:47414835-47419152	0	-	47414835	47419081	789624	5	266,51,160,173,83,	0,1816,1968,2342,4234,
#Partially deleted in new
chr19	47415062	47419523	chr19:47415062-47419523	0	-	47415062	47415062	8553170	5	39,51,160,173,92,	0,1589,1741,2115,4369,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	47415875	47417898	chr19:47415875-47417898	0	-	47415875	47415875	8553170	2	1088,721,	0,1302,
#Partially deleted in new
chr19	47428016	47472168	chr19:47428016-47472168	3	-	47430088	47466403	789624	10	2449,279,100,125,18,104,423,665,691,380,	0,4150,9445,9832,13152,13320,19792,28913,37712,43772,
#Partially deleted in new
chr19	47428660	47471872	chr19:47428660-47471872	1	-	47430088	47457537	789624	9	1805,279,100,125,18,104,423,665,84,	0,3506,8801,9188,12508,12676,19148,28269,43128,
#Partially deleted in new
chr19	47429739	47471863	chr19:47429739-47471863	0	-	47429739	47429739	8553170	8	726,279,100,125,18,104,179,75,	0,2427,7722,8109,11429,11597,18069,42049,
#Partially deleted in new
chr19	47430234	47432568	chr19:47430234-47432568	0	-	47430234	47430234	8553170	2	231,402,	0,1932,
#Partially deleted in new
chr19	47432406	47447622	chr19:47432406-47447622	0	-	47432406	47432406	8553170	6	39,100,125,18,104,189,	0,5055,5442,8762,8930,15027,
#Partially deleted in new
chr19	47457512	47471868	chr19:47457512-47471868	0	-	47457512	47466124	789624	3	82,419,80,	0,8216,14276,
#Partially deleted in new
chr19	47465734	47471893	chr19:47465734-47471893	0	-	47465734	47466169	789624	2	465,105,	0,6054,
#Partially deleted in new
chr19	47475143	47484268	chr19:47475143-47484268	3	-	47475415	47484160	789624	12	401,183,136,76,78,110,74,76,55,85,83,334,	0,1388,1659,2562,4719,5154,5616,5814,8017,8151,8358,8791,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	47475192	47484162	chr19:47475192-47484162	0	-	47483156	47484160	789624	13	352,183,136,76,78,110,70,76,56,90,85,83,228,	0,1339,1610,2513,4670,5105,5571,5765,6386,7933,8102,8309,8742,
#Partially deleted in new
chr19	47476843	47484176	chr19:47476843-47484176	0	-	47476843	47484160	789624	8	95,76,78,110,74,76,55,242,	0,862,3019,3454,3916,4114,6317,7091,
#Partially deleted in new
chr19	47477720	47484219	chr19:47477720-47484219	0	-	47477720	47479929	789624	10	61,78,110,74,76,55,85,83,79,42,	0,2142,2577,3039,3237,5440,5574,5781,6214,6457,
#Partially deleted in new
chr19	47480556	47483578	chr19:47480556-47483578	0	-	47480556	47480556	8553170	5	277,76,55,85,77,	0,401,2604,2738,2945,
#Partially deleted in new
chr19	47480691	47484265	chr19:47480691-47484265	0	-	47480691	47480691	8553170	7	142,76,55,85,83,151,46,	0,266,2469,2603,2810,3243,3528,
#Partially deleted in new
chr19	47480722	47484261	chr19:47480722-47484261	0	-	47480722	47480722	8553170	7	111,76,55,85,83,151,27,	0,235,2438,2572,2779,3212,3512,
#Partially deleted in new
chr19	47480826	47483894	chr19:47480826-47483894	0	-	47480826	47480826	8553170	6	7,76,55,85,83,66,	0,131,2334,2468,2675,3002,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	47484281	47496382	chr19:47484281-47496382	1	+	47484281	47484281	8553170	3	243,155,1355,	0,9165,10746,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	47484307	47501597	chr19:47484307-47501597	3	+	47484307	47484307	789624	4	217,155,117,141,	0,9139,10720,17149,
#Partially deleted in new
chr19	47487636	47515240	chr19:47487636-47515240	3	-	47488287	47514940	789624	11	753,51,69,105,85,56,78,47,117,80,398,	0,2074,3151,4378,5324,5482,5779,7913,12996,15786,27206,
#Partially deleted in new
chr19	47487637	47497096	chr19:47487637-47497096	0	-	47487637	47487637	8553170	5	752,51,69,1479,1547,	0,2073,3150,4377,7912,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	47487637	47489519	chr19:47487637-47489519	3	-	47487637	47487637	8553170	1	1882,	0,
#Partially deleted in new
chr19	47487641	47492044	chr19:47487641-47492044	0	-	47488287	47492044	789624	5	249,155,51,69,30,	0,593,2069,3146,4373,
#Partially deleted in new
chr19	47487661	47491475	chr19:47487661-47491475	0	-	47487661	47487661	8553170	3	728,51,688,	0,2049,3126,
#Partially deleted in new
chr19	47487678	47515020	chr19:47487678-47515020	1	-	47488287	47514940	789624	10	711,51,69,105,85,56,78,47,80,178,	0,2032,3109,4336,5282,5440,5737,7871,15744,27164,
#Partially deleted in new
chr19	47487679	47515058	chr19:47487679-47515058	0	-	47495586	47514940	789624	9	710,51,69,105,85,56,78,47,216,	0,2031,3108,4335,5281,5439,5736,7870,27163,
#Partially deleted in new
chr19	47489721	47515026	chr19:47489721-47515026	0	-	47489721	47514940	789624	10	40,69,105,85,56,78,47,117,110,184,	0,1066,2293,3239,3397,3694,5828,10911,13671,25121,
#Deleted in new
chr19	47489753	47493640	chr19:47489753-47493640	0	-	47489753	47489753	8553170	6	8,69,105,85,56,225,	0,1034,2261,3207,3365,3662,
#Partially deleted in new
chr19	47490787	47500749	chr19:47490787-47500749	0	-	47490787	47500749	789624	5	69,105,78,47,117,	0,1227,2628,4762,9845,
#Partially deleted in new
chr19	47490843	47515043	chr19:47490843-47515043	0	-	47505458	47514940	789624	10	13,105,85,56,78,47,117,80,207,201,	0,1171,2117,2275,2572,4706,9789,12579,14493,23999,
#Partially deleted in new
chr19	47492060	47512766	chr19:47492060-47512766	0	-	47492060	47495579	789624	6	59,85,56,78,47,54,	0,900,1058,1355,3489,20652,
#Partially deleted in new
chr19	47492585	47515022	chr19:47492585-47515022	0	-	47492585	47492585	8553170	4	589,78,47,180,	0,830,2964,22257,
#Partially deleted in new
chr19	47492876	47514945	chr19:47492876-47514945	0	-	47492876	47492876	8553170	5	298,78,47,117,103,	0,539,2673,7756,21966,
#Partially deleted in new
chr19	47492949	47515005	chr19:47492949-47515005	0	-	47492949	47492949	8553170	7	225,78,47,117,80,143,163,	0,466,2600,7683,10473,13882,21893,
#Partially deleted in new
chr19	47492960	47512802	chr19:47492960-47512802	0	-	47492960	47503450	789624	7	85,56,78,47,117,80,90,	0,158,455,2589,7672,10462,19752,
#Partially deleted in new
chr19	47492993	47497502	chr19:47492993-47497502	0	-	47492993	47492993	8553170	4	181,78,47,109,	0,422,2556,4400,
#Partially deleted in new
chr19	47493017	47512795	chr19:47493017-47512795	0	-	47493017	47493017	8553170	6	157,78,47,117,80,83,	0,398,2532,7615,10405,19695,
#Partially deleted in new
chr19	47493070	47515032	chr19:47493070-47515032	0	-	47493070	47493070	8553170	5	423,47,117,80,190,	0,2479,7562,10352,21772,
#Partially deleted in new
chr19	47493082	47515091	chr19:47493082-47515091	0	-	47495586	47514940	789624	5	92,78,47,117,249,	0,333,2467,7550,21760,
#Partially deleted in new
chr19	47493100	47495826	chr19:47493100-47495826	0	-	47493100	47493100	8553170	3	74,78,277,	0,315,2449,
#Partially deleted in new
chr19	47495772	47515039	chr19:47495772-47515039	0	-	47495772	47495772	8553170	4	1142,117,80,197,	0,4860,7650,19070,
#Partially deleted in new
chr19	47496595	47515039	chr19:47496595-47515039	0	-	47496595	47496595	8553170	2	319,197,	0,18247,
#Partially deleted in new
chr19	47520684	47555856	chr19:47520684-47555856	3	-	47521223	47555856	789624	15	693,176,141,89,76,104,143,64,298,174,160,59,1855,241,307,	0,794,1169,8265,8892,10957,11443,12224,17457,19020,19491,20208,23441,28560,34865,
#Partially deleted in new
chr19	47520689	47545300	chr19:47520689-47545300	0	-	47521223	47545300	789624	7	688,176,141,174,160,59,1175,	0,789,1164,19015,19486,20203,23436,
#Partially deleted in new
chr19	47520690	47555856	chr19:47520690-47555856	1	-	47521223	47555856	789624	15	687,176,141,89,76,104,143,64,355,174,160,59,1855,241,307,	0,788,1163,8259,8886,10951,11437,12218,17451,19014,19485,20202,23435,28554,34859,
#Partially deleted in new
chr19	47521223	47545261	chr19:47521223-47545261	0	-	47521223	47545261	789624	12	154,176,141,89,76,104,143,64,298,160,59,1136,	0,255,630,7726,8353,10418,10904,11685,16918,18952,19669,22902,
#Partially deleted in new
chr19	47532166	47540969	chr19:47532166-47540969	0	-	47532166	47532166	8553170	5	104,64,174,160,77,	0,742,7538,8009,8726,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	47581022	47581321	chr19:47581022-47581321	3	+	47581022	47581022	8553170	1	299,	0,
#Deleted in new
chr19	47607872	47608454	chr19:47607872-47608454	3	-	47607872	47607872	8553170	1	582,	0,
#Partially deleted in new
chr19	47608195	47703277	chr19:47608195-47703277	3	+	47673574	47702415	789624	15	87,102,46,43,66,1956,177,612,181,110,62,149,95,103,1950,	0,62247,65374,65524,67655,71125,73780,85919,86704,87169,88255,90438,90769,91107,93132,
#Partially deleted in new
chr19	47609122	47679549	chr19:47609122-47679549	0	+	47673574	47679549	789624	6	46,102,46,43,66,229,	0,61320,64447,64597,66728,70198,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	47615698	47626395	chr19:47615698-47626395	3	-	47615698	47615698	8553170	2	318,229,	0,10468,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	47661656	47663895	chr19:47661656-47663895	3	-	47661656	47661656	8553170	1	2239,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	47678961	47703222	chr19:47678961-47703222	1	+	47679324	47702415	789624	11	372,1941,177,612,181,110,62,149,95,103,1895,	0,374,3014,15153,15938,16403,17489,19672,20003,20341,22366,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	47699964	47703276	chr19:47699964-47703276	0	+	47699964	47699964	8553170	1	3312,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	47713342	47743134	chr19:47713342-47743134	3	+	47716612	47741432	789624	6	196,459,98,413,165,2254,	0,3215,5166,12469,23026,27538,
#Partially deleted in new
chr19	47713421	47741853	chr19:47713421-47741853	1	+	47718512	47741432	789624	5	117,98,413,165,973,	0,5087,12390,22947,27459,
#Partially deleted in new
chr19	47726203	47741137	chr19:47726203-47741137	0	+	47726203	47726296	789624	3	116,165,257,	0,10165,14677,
#Partially deleted in new
chr19	47729616	47741865	chr19:47729616-47741865	0	+	47729616	47729616	8553170	3	65,165,985,	0,6752,11264,
#Partially deleted in new
chr19	47745521	47757058	chr19:47745521-47757058	3	+	47745559	47757005	789624	13	262,65,109,200,71,96,105,183,176,67,77,57,60,	0,1445,4656,5386,5998,6990,9005,9187,9826,10234,11006,11166,11477,
#Partially deleted in new
chr19	47745550	47752709	chr19:47745550-47752709	0	+	47745550	47745550	8553170	6	233,65,109,200,71,198,	0,1416,4627,5357,5969,6961,
#Partially deleted in new
chr19	47745564	47756744	chr19:47745564-47756744	0	+	47745564	47745564	8553170	11	219,65,109,200,71,96,105,183,176,77,57,	0,1402,4613,5343,5955,6947,8962,9144,9783,10963,11123,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	47745564	47757057	chr19:47745564-47757057	0	+	47745564	47745564	8553170	10	219,65,109,200,71,2380,176,849,57,59,	0,1402,4613,5343,5955,6947,9783,10191,11123,11434,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	47745572	47746686	chr19:47745572-47746686	0	+	47745572	47745572	8553170	2	211,478,	0,636,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	47745890	47752553	chr19:47745890-47752553	0	+	47745890	47745890	8553170	6	139,65,109,200,71,42,	0,1076,4287,5017,5629,6621,
#Partially deleted in new
chr19	47750177	47757005	chr19:47750177-47757005	0	+	47750177	47756738	789624	10	109,200,71,96,105,49,39,77,57,7,	0,730,1342,2334,4349,4531,5606,6350,6510,6821,
#Deleted in new
chr19	47750235	47751522	chr19:47750235-47751522	0	+	47750235	47750235	8553170	2	51,615,	0,672,
#Partially deleted in new
chr19	47750245	47757058	chr19:47750245-47757058	0	+	47750245	47757005	789624	9	41,200,71,33,50,67,77,57,60,	0,662,1274,2266,5228,5510,6282,6442,6753,
#Partially deleted in new
chr19	47751036	47757058	chr19:47751036-47757058	0	+	47751036	47757005	789624	8	71,71,48,50,67,77,57,60,	0,483,1475,4437,4719,5491,5651,5962,
#Partially deleted in new
chr19	47755473	47757057	chr19:47755473-47757057	0	+	47755473	47757054	789624	5	50,67,77,57,52,	0,282,1054,1214,1532,
#Partially deleted in new
chr19	47755852	47755962	chr19:47755852-47755962	3	+	47755852	47755852	789624	1	110,	0,
#Partially deleted in new
chr19	47756529	47757048	chr19:47756529-47757048	0	+	47756529	47756529	8553170	2	215,50,	0,469,
#Partially deleted in new
chr19	47757035	47768840	chr19:47757035-47768840	3	-	47757035	47757035	789624	3	242,79,219,	0,9705,11586,
#Partially deleted in new
chr19	47778571	47784681	chr19:47778571-47784681	3	+	47778785	47781370	789624	6	243,25,54,75,99,392,	0,2153,2292,2536,2718,5718,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	47778584	47784684	chr19:47778584-47784684	1	+	47778785	47781370	789624	7	230,12,16,54,75,99,395,	0,1535,2149,2279,2523,2705,5705,
#Partially deleted in new
chr19	47778584	47784684	chr19:47778584-47784684	1	+	47778785	47781370	789624	7	230,7,15,54,75,99,395,	0,2140,2150,2279,2523,2705,5705,
#Partially deleted in new
chr19	47778676	47784564	chr19:47778676-47784564	1	+	47778785	47781370	789624	6	138,25,54,75,99,159,	0,2048,2187,2431,2613,5729,
#Partially deleted in new
chr19	47778682	47784457	chr19:47778682-47784457	0	+	47778767	47781156	789624	6	132,25,137,75,99,168,	0,2042,2181,2425,2607,5607,
#Partially deleted in new
chr19	47778690	47784654	chr19:47778690-47784654	0	+	47778690	47778690	8553170	5	124,54,75,99,365,	0,2173,2417,2599,5599,
#Partially deleted in new
chr19	47778700	47781556	chr19:47778700-47781556	1	+	47778785	47781370	789624	5	114,25,54,75,267,	0,2024,2163,2407,2589,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	47778708	47780177	chr19:47778708-47780177	0	+	47778708	47778708	8553170	2	106,530,	0,939,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	47778708	47779962	chr19:47778708-47779962	0	+	47778708	47778708	8553170	2	106,466,	0,788,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	47778932	47784681	chr19:47778932-47784681	0	+	47778932	47778932	8553170	5	1817,54,75,99,392,	0,1931,2175,2357,5357,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	47779238	47780895	chr19:47779238-47780895	0	+	47779238	47779238	8553170	3	618,25,32,	0,1486,1625,
#Partially deleted in new
chr19	47780387	47784648	chr19:47780387-47784648	0	+	47780387	47780387	8553170	5	362,137,75,99,359,	0,476,720,902,3902,
#Deleted in new
chr19	47780755	47781408	chr19:47780755-47781408	0	+	47780755	47780755	8553170	2	427,119,	0,534,
#Partially deleted in new
chr19	47780814	47784686	chr19:47780814-47784686	0	+	47780814	47780814	8553170	4	103,75,99,397,	0,293,475,3475,
#Partially deleted in new
chr19	47781079	47784399	chr19:47781079-47784399	0	+	47781079	47781079	8553170	3	103,99,110,	0,210,3210,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	47782179	47784682	chr19:47782179-47784682	0	+	47782179	47782179	8553170	1	2503,	0,
#Partially deleted in new
chr19	47794466	47794890	chr19:47794466-47794890	7	-	47794466	47794466	16724991	1	424,	0,
#Partially deleted in new
chr19	47794649	47794920	chr19:47794649-47794920	7	+	47794649	47794649	16724991	1	271,	0,
#Deleted in new
chr19	47801242	47803689	chr19:47801242-47803689	1	-	47801774	47803533	789624	2	1738,186,	0,2261,
#Deleted in new
chr19	47801479	47803558	chr19:47801479-47803558	1	-	47801774	47803533	789624	3	1038,433,55,	0,1068,2024,
#Partially deleted in new
chr19	47819778	47836314	chr19:47819778-47836314	0	+	47834443	47836314	789624	3	226,135,72,	0,14630,16464,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	47820543	47822010	chr19:47820543-47822010	0	+	47820543	47820543	8553170	1	1467,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	47821838	47843330	chr19:47821838-47843330	3	+	47834443	47839967	789624	4	172,135,152,4011,	0,12570,14404,17481,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	47821906	47843323	chr19:47821906-47843323	1	+	47834443	47839967	789624	5	104,135,152,1114,770,	0,12502,14336,17413,20647,
#Partially deleted in new
chr19	47821933	47836329	chr19:47821933-47836329	0	+	47821933	47821933	8553170	2	77,87,	0,14309,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	47821963	47843330	chr19:47821963-47843330	1	+	47834443	47839345	789624	3	47,135,4011,	0,12445,17356,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	47840709	47843109	chr19:47840709-47843109	0	+	47840709	47840709	8553170	2	45,598,	0,1802,
#Deleted in new
chr19	47860112	47861512	chr19:47860112-47861512	7	+	47860112	47860112	16724991	2	170,711,	0,689,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	47863482	47864499	chr19:47863482-47864499	3	-	47863482	47863482	8553170	2	544,95,	0,922,
#Partially deleted in new
chr19	47863615	47865341	chr19:47863615-47865341	0	-	47863615	47863615	8553170	2	411,71,	0,1655,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	47870465	47886397	chr19:47870465-47886397	3	-	47871454	47886257	0	6	1102,178,95,127,209,276,	0,4191,8570,11618,13111,15656,
#Partially deleted in new
chr19	47968045	47992170	chr19:47968045-47992170	3	-	47976711	47992081	789624	6	164,145,132,30,21,162,	0,8664,9327,11524,12875,23963,
#Partially deleted in new
chr19	47994650	48025146	chr19:47994650-48025146	3	+	48008667	48022327	789624	7	161,87,138,147,159,165,195,	0,14000,19520,21242,25068,27519,30301,
#Partially deleted in new
chr19	47994704	48022243	chr19:47994704-48022243	0	+	48008667	48022243	789624	5	107,87,147,159,74,	0,13946,21188,25014,27465,
#Partially deleted in new
chr19	47994708	48025153	chr19:47994708-48025153	1	+	48008667	48022327	789624	4	103,87,165,202,	0,13942,27461,30243,
#Partially deleted in new
chr19	48008648	48025142	chr19:48008648-48025142	1	+	48008675	48022327	789624	7	45,43,138,147,159,170,191,	0,46,5522,7244,11070,13521,16303,
#Partially deleted in new
chr19	48015892	48025134	chr19:48015892-48025134	0	+	48015892	48022327	789624	4	147,159,207,183,	0,3826,6277,9059,
#Partially deleted in new
chr19	48019804	48025148	chr19:48019804-48025148	0	+	48019804	48022327	789624	3	73,165,218,	0,2365,5126,
#Partially deleted in new
chr19	48029952	48044053	chr19:48029952-48044053	3	-	48030556	48043922	789624	6	630,148,110,144,31,194,	0,4262,9255,10652,11620,13907,
#Partially deleted in new
chr19	48041328	48043881	chr19:48041328-48043881	0	-	48041328	48041328	8553170	2	275,22,	0,2531,
#Partially deleted in new
chr19	48047842	48110817	chr19:48047842-48110817	1	-	48048342	48110515	789624	17	546,151,172,155,96,108,54,54,27,54,141,121,190,137,81,40,331,	0,5154,7035,14155,19948,26924,29928,37216,40843,42521,47621,50296,51828,56745,57490,58679,62644,
#Partially deleted in new
chr19	48047843	48110782	chr19:48047843-48110782	1	-	48052992	48106529	789624	17	545,194,172,155,96,108,54,54,27,54,141,121,190,137,112,40,296,	0,5110,7034,14154,19947,26923,29927,37215,40842,42520,47620,50295,51827,56744,57489,58678,62643,
#Partially deleted in new
chr19	48047845	48055059	chr19:48047845-48055059	0	-	48047845	48047845	8553170	3	543,151,182,	0,5151,7032,
#Partially deleted in new
chr19	48048342	48110812	chr19:48048342-48110812	3	-	48048342	48106529	789624	17	46,151,172,155,96,108,54,54,27,54,141,121,190,137,112,40,326,	0,4654,6535,13655,19448,26424,29428,36716,40343,42021,47121,49796,51328,56245,56990,58179,62144,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	48051796	48073051	chr19:48051796-48073051	0	-	48051796	48051796	8553170	6	476,155,172,155,96,716,	0,1196,3081,10201,15994,20539,
#Partially deleted in new
chr19	48054889	48067931	chr19:48054889-48067931	0	-	48054889	48054889	8553170	3	160,155,141,	0,7108,12901,
#Partially deleted in new
chr19	48054921	48090409	chr19:48054921-48090409	0	-	48054921	48090409	789624	7	128,155,96,108,54,54,46,	0,7076,12869,19845,22849,30137,35442,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	48061359	48074837	chr19:48061359-48074837	0	-	48061406	48074837	789624	5	83,33,155,96,71,	0,445,638,6431,13407,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	48061427	48064945	chr19:48061427-48064945	3	+	48061427	48061427	789624	5	51,71,156,94,196,	0,190,456,2402,3322,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	48061437	48062222	chr19:48061437-48062222	1	+	48061437	48061437	8553170	3	41,103,310,	0,148,475,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	48061631	48096937	chr19:48061631-48096937	0	-	48061631	48061631	8553170	5	206,197,96,141,239,	0,366,6159,33832,35067,
#Partially deleted in new
chr19	48062121	48098208	chr19:48062121-48098208	0	-	48062121	48098208	789624	8	31,96,108,54,54,27,141,70,	0,5669,12645,15649,22937,26564,33342,36017,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	48074437	48085110	chr19:48074437-48085110	0	-	48074437	48074437	8553170	3	437,54,52,	0,3333,10621,
#Partially deleted in new
chr19	48074845	48090603	chr19:48074845-48090603	0	-	48074845	48074845	8553170	5	29,54,54,27,240,	0,2925,10213,13840,15518,
#Partially deleted in new
chr19	48090193	48099757	chr19:48090193-48099757	0	-	48090193	48090193	8553170	4	224,141,121,87,	0,5270,7945,9477,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	48095463	48098237	chr19:48095463-48098237	0	-	48097122	48098237	789624	3	141,429,99,	0,1235,2675,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	48097764	48110767	chr19:48097764-48110767	0	-	48097764	48097764	8553170	6	495,190,137,112,40,281,	0,1906,6823,7568,8757,12722,
#Partially deleted in new
chr19	48099771	48110563	chr19:48099771-48110563	0	-	48099771	48099771	8553170	4	89,112,40,77,	0,5561,6750,10715,
#Partially deleted in new
chr19	48099781	48110563	chr19:48099781-48110563	0	-	48099781	48104649	789624	3	79,137,77,	0,4806,10705,
#Partially deleted in new
chr19	48099797	48110813	chr19:48099797-48110813	0	-	48099797	48099797	8553170	4	63,112,40,327,	0,5535,6724,10689,
#Partially deleted in new
chr19	48103419	48110563	chr19:48103419-48110563	0	-	48103419	48103419	8553170	5	32,137,112,40,77,	0,1168,1913,3102,7067,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	48104031	48105481	chr19:48104031-48105481	0	-	48104031	48104031	8553170	2	693,149,	0,1301,
#Partially deleted in new
chr19	48105333	48110746	chr19:48105333-48110746	0	-	48105333	48106529	789624	3	111,145,260,	0,1188,5153,
#Partially deleted in new
chr19	48115444	48170603	chr19:48115444-48170603	3	-	48115648	48165566	0	28	288,93,144,54,153,83,145,72,111,96,116,86,100,92,77,167,173,57,81,79,123,108,96,127,136,90,74,363,	0,428,2193,3692,5725,7489,7729,11832,12465,15631,17537,18536,20235,20589,21563,22077,24526,28098,28438,34318,34643,35787,38427,41569,45927,46817,50105,54796,
#Partially deleted in new
chr19	48115445	48170603	chr19:48115445-48170603	1	-	48115648	48165566	789624	26	287,93,144,54,153,83,145,72,111,96,116,86,100,92,77,167,173,57,81,79,123,127,136,90,74,363,	0,427,2192,3691,5724,7488,7728,11831,12464,15630,17536,18535,20234,20588,21562,22076,24525,28097,28437,34317,34642,41568,45926,46816,50104,54795,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	48115445	48116174	chr19:48115445-48116174	0	-	48115445	48115445	8553170	2	287,302,	0,427,
#Partially deleted in new
chr19	48115448	48117880	chr19:48115448-48117880	0	-	48115448	48115448	8553170	3	284,93,243,	0,424,2189,
#Partially deleted in new
chr19	48115449	48170344	chr19:48115449-48170344	1	-	48115648	48165566	0	27	283,93,144,54,153,83,145,72,111,96,116,86,100,92,77,167,173,57,81,79,123,105,96,127,136,74,104,	0,423,2188,3687,5720,7484,7724,11827,12460,15626,17532,18531,20230,20584,21558,22072,24521,28093,28433,34313,34638,35782,38422,41564,45922,50100,54791,
#Partially deleted in new
chr19	48115449	48170326	chr19:48115449-48170326	0	-	48121148	48165566	789624	28	283,93,144,54,1156,83,145,72,111,96,116,86,100,92,77,167,173,57,81,79,123,105,96,127,136,90,74,86,	0,423,2188,3687,4717,7484,7724,11827,12460,15626,17532,18531,20230,20584,21558,22072,24521,28093,28433,34313,34638,35782,38422,41564,45922,46812,50100,54791,
#Partially deleted in new
chr19	48115467	48154047	chr19:48115467-48154047	0	-	48115467	48115467	8553170	23	265,93,144,54,153,83,145,72,111,96,116,86,100,92,77,167,173,57,81,79,123,154,176,	0,405,2170,3669,5702,7466,7706,11809,12442,15608,17514,18513,20212,20566,21540,22054,24503,28075,28415,34295,34620,35764,38404,
#Partially deleted in new
chr19	48115523	48170252	chr19:48115523-48170252	0	-	48121148	48165566	0	28	209,93,144,54,1156,83,145,72,111,96,116,86,100,92,77,167,173,57,81,79,123,108,96,127,136,90,74,12,	0,349,2114,3613,4643,7410,7650,11753,12386,15552,17458,18457,20156,20510,21484,21998,24447,28019,28359,34239,34564,35708,38348,41490,45848,46738,50026,54717,
#Partially deleted in new
chr19	48115523	48165627	chr19:48115523-48165627	1	-	48121148	48165566	0	27	209,93,144,54,1156,83,145,72,111,96,116,86,100,92,77,167,173,57,81,79,123,108,96,127,136,90,78,	0,349,2114,3613,4643,7410,7650,11753,12386,15552,17458,18457,20156,20510,21484,21998,24447,28019,28359,34239,34564,35708,38348,41490,45848,46738,50026,
#Partially deleted in new
chr19	48121196	48135722	chr19:48121196-48135722	0	-	48133030	48135722	789624	8	126,83,145,72,111,96,116,43,	0,1737,1977,6080,6713,9879,11785,14483,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	48121271	48123623	chr19:48121271-48123623	0	-	48121271	48121271	8553170	3	51,83,450,	0,1662,1902,
#Partially deleted in new
chr19	48127276	48133494	chr19:48127276-48133494	0	-	48127276	48127276	8553170	4	72,111,96,513,	0,633,3799,5705,
#Partially deleted in new
chr19	48135753	48137891	chr19:48135753-48137891	0	-	48135753	48135753	8553170	4	26,92,77,370,	0,280,1254,1768,
#Partially deleted in new
chr19	48136043	48170322	chr19:48136043-48170322	0	-	48137065	48165566	789624	14	82,77,238,173,57,81,79,123,108,127,136,90,74,82,	0,964,1478,3927,7499,7839,13719,14044,15188,20970,25328,26218,29506,34197,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	48145907	48147413	chr19:48145907-48147413	3	+	48145907	48145907	8553170	2	211,148,	0,1358,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	48149802	48154207	chr19:48149802-48154207	0	-	48149802	48149802	8553170	4	39,123,108,336,	0,285,1429,4069,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	48149809	48154564	chr19:48149809-48154564	0	-	48149809	48149809	8553170	5	32,123,108,96,172,	0,278,1422,4062,4583,
#Partially deleted in new
chr19	48149825	48170329	chr19:48149825-48170329	0	-	48149825	48149825	8553170	7	16,123,108,70,90,74,89,	0,262,1406,11612,12436,15724,20415,
#Partially deleted in new
chr19	48150131	48170314	chr19:48150131-48170314	0	-	48150131	48165566	789624	6	79,127,136,90,74,74,	0,6882,11240,12130,15418,20109,
#Partially deleted in new
chr19	48153900	48169689	chr19:48153900-48169689	0	-	48153900	48165566	789624	6	67,127,136,90,74,81,	0,3113,7471,8361,11649,15708,
#Partially deleted in new
chr19	48161173	48170344	chr19:48161173-48170344	0	-	48161173	48161173	8553170	4	334,90,74,104,	0,1088,4376,9067,
#Partially deleted in new
chr19	48162283	48170208	chr19:48162283-48170208	0	-	48162283	48165566	789624	3	68,74,235,	0,3266,7690,
#Partially deleted in new
chr19	48170691	48197620	chr19:48170691-48197620	1	+	48171802	48197259	789624	5	23,284,313,1266,391,	0,1102,11763,23961,26538,
#Partially deleted in new
chr19	48170691	48197620	chr19:48170691-48197620	3	+	48171802	48196827	789624	4	23,284,313,2968,	0,1102,11763,23961,
#Partially deleted in new
chr19	48171921	48174855	chr19:48171921-48174855	0	+	48171921	48171921	8553170	2	156,163,	0,2771,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	48180769	48203952	chr19:48180769-48203952	0	-	48180769	48180769	8553170	8	2323,216,93,123,105,69,165,109,	0,5780,6908,8673,9726,11144,12247,23074,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	48198106	48199720	chr19:48198106-48199720	3	-	48198106	48198106	8553170	1	1614,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	48203145	48218953	chr19:48203145-48218953	0	-	48206437	48218953	789624	4	1098,137,45,83,	0,3238,12194,15725,
#Partially deleted in new
chr19	48203631	48255898	chr19:48203631-48255898	0	-	48231761	48241020	789624	11	612,45,142,126,263,230,151,141,102,97,107,	0,11708,15239,18098,26806,27145,28028,30771,37330,46119,52160,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	48204082	48213154	chr19:48204082-48213154	3	+	48204082	48204082	8553170	3	140,237,189,	0,6097,8883,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	48208085	48249668	chr19:48208085-48249668	0	-	48231761	48241020	789624	10	3890,45,142,126,260,230,151,141,102,146,	0,7254,10785,13644,22352,22691,23574,26317,32876,41437,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	48208103	48241063	chr19:48208103-48241063	1	-	48211709	48241020	789624	11	3872,45,142,126,263,230,151,41,141,150,102,	0,7236,10767,13626,22334,22673,23556,24349,26299,30279,32858,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	48208103	48249847	chr19:48208103-48249847	1	-	48211709	48241020	789624	11	3872,45,142,126,263,230,151,41,141,102,97,	0,7236,10767,13626,22334,22673,23556,24349,26299,32858,41647,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	48209643	48232114	chr19:48209643-48232114	0	-	48209643	48209643	8553170	5	2332,45,263,230,455,	0,5696,20794,21133,22016,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	48209643	48249668	chr19:48209643-48249668	0	-	48231761	48241020	789624	9	2332,45,126,260,230,151,141,102,146,	0,5696,12086,20794,21133,22016,24759,31318,39879,
#Partially deleted in new
chr19	48210486	48255886	chr19:48210486-48255886	1	-	48215366	48241020	789624	13	1489,45,126,263,230,151,41,141,150,102,111,97,95,	0,4853,11243,19951,20290,21173,21966,23916,27896,30475,39036,39264,45305,
#Partially deleted in new
chr19	48210786	48249826	chr19:48210786-48249826	1	-	48211709	48241020	789624	12	1189,45,142,126,263,230,151,41,141,102,111,76,	0,4553,8084,10943,19651,19990,20873,21666,23616,30175,38736,38964,
#Partially deleted in new
chr19	48210786	48249810	chr19:48210786-48249810	0	-	48233337	48241020	789624	14	1189,45,142,126,263,230,151,41,133,141,150,102,111,60,	0,4553,8084,10943,19651,19990,20873,21666,22485,23616,27596,30175,38736,38964,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	48210789	48249833	chr19:48210789-48249833	0	-	48210789	48210789	8553170	12	1186,45,142,126,263,230,151,2091,150,102,111,83,	0,4550,8081,10940,19648,19987,20870,21663,27593,30172,38733,38961,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	48211151	48249826	chr19:48211151-48249826	0	-	48232698	48241020	789624	12	824,45,142,126,263,230,151,337,141,150,102,76,	0,4188,7719,10578,19286,19625,20508,21301,23251,27231,29810,38599,
#Partially deleted in new
chr19	48211376	48249833	chr19:48211376-48249833	1	-	48215366	48241020	789624	11	599,45,126,263,230,151,41,141,150,102,83,	0,3963,10353,19061,19400,20283,21076,23026,27006,29585,38374,
#Partially deleted in new
chr19	48211565	48255946	chr19:48211565-48255946	3	-	48211709	48241020	789624	12	410,45,142,126,263,230,151,41,141,102,97,155,	0,3774,7305,10164,18872,19211,20094,20887,22837,29396,38185,44226,
#Partially deleted in new
chr19	48211616	48255889	chr19:48211616-48255889	1	-	48211709	48241020	789624	14	359,45,142,126,263,230,151,41,141,150,102,111,97,98,	0,3723,7254,10113,18821,19160,20043,20836,22786,26766,29345,37906,38134,44175,
#Partially deleted in new
chr19	48211616	48241063	chr19:48211616-48241063	0	-	48231761	48241020	789624	10	359,45,142,126,263,230,151,141,150,102,	0,3723,7254,10113,18821,19160,20043,22786,26766,29345,
#Partially deleted in new
chr19	48211826	48230498	chr19:48211826-48230498	0	-	48223856	48230498	789624	6	149,45,142,126,150,61,	0,3513,7044,9903,11892,18611,
#Partially deleted in new
chr19	48211896	48249816	chr19:48211896-48249816	0	-	48221848	48241020	789624	8	79,45,126,151,41,141,102,66,	0,3443,9833,19763,20556,22506,29065,37854,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	48215137	48230647	chr19:48215137-48230647	0	-	48215137	48215137	8553170	3	247,126,210,	0,6592,15300,
#Partially deleted in new
chr19	48231728	48255911	chr19:48231728-48255911	0	-	48231728	48231728	8553170	5	82,141,102,128,120,	0,2674,9233,18022,24063,
#Deleted in new
chr19	48233409	48234464	chr19:48233409-48234464	0	-	48233409	48233409	8553170	2	571,62,	0,993,
#Partially deleted in new
chr19	48233820	48249828	chr19:48233820-48249828	0	-	48233820	48233820	8553170	4	723,144,102,78,	0,4562,7141,15930,
#Partially deleted in new
chr19	48233845	48249614	chr19:48233845-48249614	0	-	48233845	48233845	8553170	5	135,141,150,102,92,	0,557,4537,7116,15677,
#Partially deleted in new
chr19	48234277	48249826	chr19:48234277-48249826	0	-	48234277	48234277	8553170	4	266,102,111,76,	0,6684,15245,15473,
#Partially deleted in new
chr19	48238261	48249771	chr19:48238261-48249771	1	-	48238378	48241020	789624	3	271,102,249,	0,2700,11261,
#Partially deleted in new
chr19	48238333	48255893	chr19:48238333-48255893	1	-	48238378	48241020	789624	4	199,102,97,102,	0,2628,11417,17458,
#Partially deleted in new
chr19	48238335	48255898	chr19:48238335-48255898	1	-	48238378	48241020	789624	5	197,102,111,97,107,	0,2626,11187,11415,17456,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	48255674	48258199	chr19:48255674-48258199	3	+	48255674	48255674	789624	2	120,1849,	0,676,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	48262899	48271283	chr19:48262899-48271283	3	-	48262899	48262899	8553170	3	285,89,63,	0,7245,8321,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	48270101	48287608	chr19:48270101-48287608	3	+	48279799	48286878	789624	6	118,205,102,78,127,1848,	0,1143,1625,9629,12269,15659,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	48271055	48287070	chr19:48271055-48287070	1	+	48279799	48286878	789624	5	64,163,78,127,1310,	0,231,8675,11315,14705,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	48271396	48287606	chr19:48271396-48287606	1	+	48279799	48286878	789624	5	53,102,78,127,1846,	0,330,8334,10974,14364,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	48282161	48285776	chr19:48282161-48285776	0	+	48282161	48282161	8553170	2	336,16,	0,3599,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	48296456	48320075	chr19:48296456-48320075	3	-	48296975	48318771	789624	14	1062,79,98,164,169,83,135,188,68,114,123,190,100,642,	0,1133,1543,1720,6237,6556,7193,7496,9799,15096,15537,21930,22256,22977,
#Partially deleted in new
chr19	48296461	48320385	chr19:48296461-48320385	0	-	48296461	48296461	8553170	13	1207,98,164,169,83,135,188,68,114,123,190,100,87,	0,1538,1715,6232,6551,7188,7491,9794,15091,15532,21925,22251,23837,
#Partially deleted in new
chr19	48306299	48321894	chr19:48306299-48321894	0	-	48306299	48306299	8553170	5	24,114,93,57,174,	0,5253,13999,14455,15421,
#Partially deleted in new
chr19	48318464	48321873	chr19:48318464-48321873	0	-	48318464	48318464	8553170	5	112,100,93,57,196,	0,248,1834,2290,3213,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	48319859	48320796	chr19:48319859-48320796	0	-	48319859	48319859	8553170	2	532,25,	0,912,
#Partially deleted in new
chr19	48321508	48329439	chr19:48321508-48329439	0	+	48326844	48329439	789624	4	469,93,103,88,	0,5321,6012,7843,
#Partially deleted in new
chr19	48325324	48330553	chr19:48325324-48330553	3	+	48326844	48330470	789624	5	286,93,103,141,253,	0,1505,2196,4027,4976,
#Partially deleted in new
chr19	48325346	48330553	chr19:48325346-48330553	1	+	48329377	48330470	789624	4	264,103,141,253,	0,2174,4005,4954,
#Partially deleted in new
chr19	48325543	48330355	chr19:48325543-48330355	0	+	48329377	48330355	789624	3	67,141,55,	0,3808,4757,
#Partially deleted in new
chr19	48325546	48327800	chr19:48325546-48327800	0	+	48325546	48325546	8553170	3	64,93,280,	0,1283,1974,
#Partially deleted in new
chr19	48325560	48330539	chr19:48325560-48330539	0	+	48326844	48327634	789624	5	50,93,144,141,239,	0,1269,1960,3791,4740,
#Partially deleted in new
chr19	48325580	48330553	chr19:48325580-48330553	1	+	48326844	48330470	789624	6	30,63,93,103,141,253,	0,410,1249,1940,3771,4720,
#Partially deleted in new
chr19	48325607	48330524	chr19:48325607-48330524	0	+	48326844	48330524	789624	5	3,93,41,141,224,	0,1222,1913,3744,4693,
#Deleted in new
chr19	48329269	48330483	chr19:48329269-48330483	0	+	48329269	48329269	8553170	2	223,183,	0,1031,
#Partially deleted in new
chr19	48332355	48364237	chr19:48332355-48364237	3	-	48333218	48363920	789624	8	1078,190,280,131,195,105,241,340,	0,1652,10174,10965,12804,27716,30935,31542,
#Partially deleted in new
chr19	48332356	48363938	chr19:48332356-48363938	1	-	48333218	48363920	789624	6	1077,190,280,131,241,41,	0,1651,10173,10964,30934,31541,
#Partially deleted in new
chr19	48332360	48364059	chr19:48332360-48364059	1	-	48333218	48363920	789624	7	1073,190,280,131,195,241,162,	0,1647,10169,10960,12799,30930,31537,
#Partially deleted in new
chr19	48333275	48342991	chr19:48333275-48342991	0	-	48333275	48333275	8553170	3	158,190,462,	0,732,9254,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	48342746	48363940	chr19:48342746-48363940	0	-	48342746	48342746	8553170	4	705,105,241,43,	0,17325,20544,21151,
#Partially deleted in new
chr19	48342797	48363676	chr19:48342797-48363676	0	-	48342797	48363647	789624	5	12,131,105,241,52,	0,523,17274,20493,20827,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	48342876	48363938	chr19:48342876-48363938	0	-	48342876	48342876	8553170	3	575,241,41,	0,20414,21021,
#Partially deleted in new
chr19	48343344	48363940	chr19:48343344-48363940	0	-	48343344	48343344	8553170	4	107,195,112,43,	0,1815,16727,20553,
#Partially deleted in new
chr19	48345272	48363674	chr19:48345272-48363674	0	-	48345272	48363509	789624	3	82,105,384,	0,14799,18018,
#Partially deleted in new
chr19	48359875	48363938	chr19:48359875-48363938	0	-	48359875	48359875	8553170	3	301,241,41,	0,3415,4022,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	48360286	48363938	chr19:48360286-48363938	0	-	48360286	48360286	8553170	3	282,241,41,	0,3004,3611,
#Partially deleted in new
chr19	48364394	48376363	chr19:48364394-48376363	3	+	48365842	48376318	789624	5	143,200,238,140,279,	0,1341,9122,11218,11690,
#Partially deleted in new
chr19	48373042	48375701	chr19:48373042-48375701	0	+	48373570	48375701	789624	3	38,238,89,	0,474,2570,
#Partially deleted in new
chr19	48373102	48376376	chr19:48373102-48376376	1	+	48373570	48376125	789624	4	113,238,140,368,	0,414,2510,2906,
#Partially deleted in new
chr19	48373107	48376271	chr19:48373107-48376271	1	+	48373570	48376125	789624	3	108,238,187,	0,409,2977,
#Partially deleted in new
chr19	48382569	48391553	chr19:48382569-48391553	3	-	48383292	48391358	789624	5	758,253,159,101,286,	0,1660,6983,7854,8698,
#Partially deleted in new
chr19	48382577	48390855	chr19:48382577-48390855	1	-	48383292	48390429	789624	4	750,253,159,432,	0,1652,6975,7846,
#Partially deleted in new
chr19	48384238	48391511	chr19:48384238-48391511	0	-	48384238	48391358	789624	5	244,67,159,101,244,	0,3516,5314,6185,7029,
#Deleted in new
chr19	48389481	48391518	chr19:48389481-48391518	0	-	48389481	48389481	8553170	3	230,101,251,	0,942,1786,
#Deleted in new
chr19	48390198	48391502	chr19:48390198-48391502	0	-	48390198	48390198	8553170	2	326,235,	0,1069,
#Partially deleted in new
chr19	48394874	48444931	chr19:48394874-48444931	3	+	48398392	48443937	789624	13	62,491,620,115,212,169,154,126,230,161,188,233,2332,	0,3492,9859,19116,19498,19989,21127,24359,24710,26910,46894,47275,47725,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	48445772	48457022	chr19:48445772-48457022	3	+	48446005	48453025	789624	7	420,118,163,214,143,198,4315,	0,612,908,4540,4893,5261,6935,
#Partially deleted in new
chr19	48445840	48451202	chr19:48445840-48451202	0	+	48446684	48451202	789624	6	74,118,163,214,143,169,	0,544,840,4472,4825,5193,
#Deleted in new
chr19	48445991	48446687	chr19:48445991-48446687	0	+	48445991	48445991	8553170	2	511,7,	0,689,
#Partially deleted in new
chr19	48455508	48466021	chr19:48455508-48466021	3	+	48461724	48464777	789624	3	350,769,1841,	0,6161,8672,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	48461248	48466980	chr19:48461248-48466980	1	+	48461724	48464777	789624	2	1190,2800,	0,2932,
#Partially deleted in new
chr19	48465592	48466937	chr19:48465592-48466937	0	-	48465592	48465592	8553170	2	346,369,	0,976,
#Partially deleted in new
chr19	48465607	48469144	chr19:48465607-48469144	0	-	48465607	48465607	8553170	3	331,39,134,	0,961,3403,
#Partially deleted in new
chr19	48465610	48469693	chr19:48465610-48469693	0	-	48465610	48465610	8553170	3	328,39,264,	0,958,3819,
#Partially deleted in new
chr19	48465662	48469507	chr19:48465662-48469507	3	-	48465662	48465662	8553170	3	276,233,497,	0,906,3348,
#Partially deleted in new
chr19	48465836	48472431	chr19:48465836-48472431	3	+	48470381	48472431	789624	4	121,148,67,107,	0,4516,4766,6488,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	48469031	48482314	chr19:48469031-48482314	3	+	48469507	48479210	0	12	495,148,67,119,81,113,149,112,77,72,155,3192,	0,1321,1571,3293,4266,4873,5150,5806,9037,9243,9406,10091,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	48469207	48482313	chr19:48469207-48482313	1	+	48469507	48479210	789624	12	319,148,67,119,81,113,149,112,80,72,155,3191,	0,1145,1395,3117,4090,4697,4974,5630,8858,9067,9230,9915,
#Partially deleted in new
chr19	48469305	48474275	chr19:48469305-48474275	0	+	48469507	48474275	789624	7	221,148,67,119,81,296,94,	0,1047,1297,3019,3992,4416,4876,
#Partially deleted in new
chr19	48469320	48479365	chr19:48469320-48479365	0	+	48469507	48478135	789624	12	206,148,67,119,81,113,149,116,77,72,155,243,	0,1032,1282,3004,3977,4584,4861,5517,8748,8954,9117,9802,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	48469346	48479382	chr19:48469346-48479382	0	+	48469346	48469346	8553170	11	180,148,67,119,81,113,149,3308,72,155,260,	0,1006,1256,2978,3951,4558,4835,5491,8928,9091,9776,
#Partially deleted in new
chr19	48469350	48472540	chr19:48469350-48472540	0	+	48469350	48469350	8553170	3	176,148,216,	0,1002,2974,
#Partially deleted in new
chr19	48469364	48472523	chr19:48469364-48472523	0	+	48469364	48469364	8553170	4	162,148,67,199,	0,988,1238,2960,
#Partially deleted in new
chr19	48469432	48480653	chr19:48469432-48480653	1	+	48469507	48479210	0	13	94,148,67,119,81,113,149,112,3,77,72,155,1531,	0,920,1170,2892,3865,4472,4749,5405,8284,8636,8842,9005,9690,
#Partially deleted in new
chr19	48469633	48474330	chr19:48469633-48474330	0	+	48469958	48474330	789624	7	410,148,67,119,81,113,149,	0,719,969,2691,3664,4271,4548,
#Deleted in new
chr19	48472351	48475148	chr19:48472351-48475148	0	+	48472351	48475047	789624	5	92,81,113,149,311,	0,946,1553,1830,2486,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	48472720	48476276	chr19:48472720-48476276	0	+	48472720	48472720	8553170	3	1297,149,1439,	0,1461,2117,
#Deleted in new
chr19	48472720	48474009	chr19:48472720-48474009	0	+	48472720	48472720	8553170	2	658,105,	0,1184,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	48475099	48482313	chr19:48475099-48482313	1	+	48476353	48481967	789624	4	1428,54,147,391,	0,1429,6675,6823,
#Deleted in new
chr19	48479925	48480879	chr19:48479925-48480879	0	+	48479925	48479925	8553170	2	163,130,	0,824,
#Partially deleted in new
chr19	48485270	48513189	chr19:48485270-48513189	3	-	48485772	48513189	789624	16	519,138,136,416,2525,150,122,85,149,88,119,77,151,134,113,50,	0,5837,6133,8423,12122,15725,16012,16207,17162,17638,23580,24166,24752,25188,26230,27869,
#Partially deleted in new
chr19	48485270	48511804	chr19:48485270-48511804	1	-	48485772	48511576	789624	15	519,138,136,416,2525,150,122,85,149,88,119,77,151,134,304,	0,5837,6133,8423,12122,15725,16012,16207,17162,17638,23580,24166,24752,25188,26230,
#Partially deleted in new
chr19	48485270	48498405	chr19:48485270-48498405	0	-	48485539	48498405	8553170	5	519,138,136,416,1013,	0,5837,6133,8423,12122,
#Partially deleted in new
chr19	48485772	48513935	chr19:48485772-48513935	1	-	48485772	48513586	8553170	16	17,138,136,416,2525,150,122,85,149,88,119,77,151,134,113,390,	0,5335,5631,7921,11620,15223,15510,15705,16660,17136,23078,23664,24250,24686,25728,27773,
#Partially deleted in new
chr19	48501282	48509513	chr19:48501282-48509513	0	-	48509221	48509513	8553170	7	122,85,149,88,119,114,77,	0,195,1150,1626,7568,7852,8154,
#Deleted in new
chr19	48513206	48513660	chr19:48513206-48513660	3	-	48513206	48513206	8553170	1	454,	0,
#Partially deleted in new
chr19	48552074	48599425	chr19:48552074-48599425	3	+	48552252	48599406	0	7	249,143,209,127,95,181,291,	0,23866,35154,39534,40647,44664,47060,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	48575539	48599425	chr19:48575539-48599425	1	+	48575914	48599406	0	6	544,209,127,95,181,291,	0,11689,16069,17182,21199,23595,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	48591100	48599274	chr19:48591100-48599274	0	+	48591100	48591100	8553170	5	173,127,95,181,140,	0,508,1621,5638,8034,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	48595785	48599423	chr19:48595785-48599423	0	+	48595785	48595785	8553170	2	1134,289,	0,3349,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	48600809	48613562	chr19:48600809-48613562	3	-	48601108	48613372	789624	5	560,418,125,168,655,	0,2684,9066,9870,12098,
#Deleted in new
chr19	48606742	48607714	chr19:48606742-48607714	3	+	48606978	48607353	789624	1	972,	0,
#Partially deleted in new
chr19	48610790	48614815	chr19:48610790-48614815	0	-	48610790	48613123	789624	3	57,400,108,	0,2117,3917,
#Deleted in new
chr19	48614171	48614841	chr19:48614171-48614841	0	-	48614171	48614171	8553170	2	456,134,	0,536,
#Deleted in new
chr19	48614194	48614854	chr19:48614194-48614854	0	-	48614194	48614194	8553170	3	142,188,147,	0,245,513,
#Partially deleted in new
chr19	48615327	48619536	chr19:48615327-48619536	3	-	48615371	48619143	0	7	120,70,124,99,108,87,396,	0,549,751,1398,1988,2463,3813,
#Partially deleted in new
chr19	48615327	48619163	chr19:48615327-48619163	0	-	48615327	48615327	8553170	5	120,70,1345,87,23,	0,549,751,2463,3813,
#Partially deleted in new
chr19	48615329	48619168	chr19:48615329-48619168	0	-	48615329	48619143	789624	5	118,99,108,87,28,	0,1396,1986,2461,3811,
#Deleted in new
chr19	48615330	48617884	chr19:48615330-48617884	0	-	48615371	48617884	789624	6	117,70,124,99,108,94,	0,546,748,1395,1985,2460,
#Deleted in new
chr19	48615330	48616425	chr19:48615330-48616425	0	-	48615330	48615330	8553170	2	117,549,	0,546,
#Partially deleted in new
chr19	48615330	48619163	chr19:48615330-48619163	1	-	48615371	48619143	789624	6	117,29,99,108,87,23,	0,546,1395,1985,2460,3810,
#Partially deleted in new
chr19	48615330	48619183	chr19:48615330-48619183	0	-	48615330	48615330	8553170	4	616,1345,87,43,	0,748,2460,3810,
#Partially deleted in new
chr19	48615330	48619181	chr19:48615330-48619181	1	-	48615371	48619143	0	6	117,70,124,99,108,41,	0,546,748,1395,1985,3810,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	48615331	48619175	chr19:48615331-48619175	0	-	48615331	48615331	8553170	1	3844,	0,
#Deleted in new
chr19	48615332	48617797	chr19:48615332-48617797	0	-	48615371	48617797	789624	6	115,70,142,99,108,7,	0,544,746,1393,1983,2458,
#Partially deleted in new
chr19	48615335	48619176	chr19:48615335-48619176	0	-	48616759	48619143	789624	7	112,70,124,99,100,87,36,	0,541,743,1390,1980,2455,3805,
#Partially deleted in new
chr19	48615365	48619177	chr19:48615365-48619177	1	-	48615872	48619143	789624	6	581,124,99,108,87,37,	0,713,1360,1950,2425,3775,
#Partially deleted in new
chr19	48615392	48619127	chr19:48615392-48619127	0	-	48615392	48617357	789624	7	55,70,124,99,108,87,568,	0,484,686,1333,1923,2398,3167,
#Partially deleted in new
chr19	48615981	48619183	chr19:48615981-48619183	0	-	48615981	48615981	8553170	4	843,108,87,43,	0,1334,1809,3159,
#Partially deleted in new
chr19	48616265	48619164	chr19:48616265-48619164	0	-	48616265	48616265	8553170	3	559,108,24,	0,1050,2875,
#Partially deleted in new
chr19	48617157	48619184	chr19:48617157-48619184	0	-	48617157	48617157	8553170	2	720,44,	0,1983,
#Partially deleted in new
chr19	48619271	48623858	chr19:48619271-48623858	1	-	48619271	48619271	8553170	3	527,198,41,	0,1117,4546,
#Partially deleted in new
chr19	48619290	48630405	chr19:48619290-48630405	3	+	48620514	48629773	789624	7	253,152,472,150,95,116,1725,	0,1111,6600,8401,8684,8871,9390,
#Partially deleted in new
chr19	48619290	48630406	chr19:48619290-48630406	1	+	48627798	48629773	789624	6	253,152,150,95,116,1726,	0,1111,8401,8684,8871,9390,
#Partially deleted in new
chr19	48619449	48628651	chr19:48619449-48628651	1	+	48625959	48628281	789624	6	94,152,413,150,95,490,	0,952,6500,8242,8525,8712,
#Partially deleted in new
chr19	48619451	48629916	chr19:48619451-48629916	1	+	48620514	48629773	789624	7	92,152,295,150,95,116,1236,	0,950,6616,8240,8523,8710,9229,
#Partially deleted in new
chr19	48619533	48630405	chr19:48619533-48630405	1	+	48620514	48629773	789624	7	156,152,472,150,95,116,1725,	0,868,6357,8158,8441,8628,9147,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	48619568	48623401	chr19:48619568-48623401	0	-	48619568	48619568	8553170	2	148,195,	0,3638,
#Partially deleted in new
chr19	48620514	48629773	chr19:48620514-48629773	0	+	48620514	48627802	789624	5	39,150,95,116,1093,	0,7177,7460,7647,8166,
#Partially deleted in new
chr19	48624005	48630717	chr19:48624005-48630717	0	+	48625959	48630717	789624	6	425,472,150,95,116,284,	0,1885,3686,3969,4156,6428,
#Deleted in new
chr19	48624342	48626358	chr19:48624342-48626358	0	+	48625959	48626358	789624	2	97,468,	0,1548,
#Deleted in new
chr19	48624427	48626175	chr19:48624427-48626175	0	+	48625959	48626175	789624	2	428,285,	0,1463,
#Deleted in new
chr19	48624471	48626301	chr19:48624471-48626301	0	+	48624471	48624471	8553170	2	384,234,	0,1596,
#Partially deleted in new
chr19	48624951	48630405	chr19:48624951-48630405	1	+	48625959	48629773	789624	6	125,472,150,95,116,1725,	0,939,2740,3023,3210,3729,
#Partially deleted in new
chr19	48624968	48630717	chr19:48624968-48630717	1	+	48625959	48630615	789624	6	1394,150,95,116,1046,284,	0,2723,3006,3193,3712,5465,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	48625028	48626814	chr19:48625028-48626814	0	+	48625028	48625028	8553170	1	1786,	0,
#Partially deleted in new
chr19	48630029	48637438	chr19:48630029-48637438	3	-	48630836	48636994	789624	4	1023,212,411,583,	0,3414,5550,6826,
#Partially deleted in new
chr19	48630684	48634636	chr19:48630684-48634636	1	-	48630836	48633599	789624	3	368,212,129,	0,2759,3823,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	48630692	48637313	chr19:48630692-48637313	0	-	48630692	48630692	8553170	2	5298,458,	0,6163,
#Partially deleted in new
chr19	48630730	48634526	chr19:48630730-48634526	1	-	48630836	48633599	789624	3	322,212,178,	0,2713,3618,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	48633085	48637363	chr19:48633085-48637363	1	-	48633416	48636994	789624	3	570,411,508,	0,2494,3770,
#Partially deleted in new
chr19	48637941	48646312	chr19:48637941-48646312	3	-	48638118	48645632	789624	9	203,166,155,73,96,186,143,75,747,	0,946,1363,1607,1846,2153,6485,7461,7624,
#Deleted in new
chr19	48638014	48639138	chr19:48638014-48639138	0	-	48638014	48638014	8553170	2	130,251,	0,873,
#Deleted in new
chr19	48638015	48638385	chr19:48638015-48638385	0	-	48638015	48638015	8553170	2	129,146,	0,224,
#Deleted in new
chr19	48638021	48639459	chr19:48638021-48639459	0	-	48638273	48639459	789624	4	123,54,166,155,	0,218,866,1283,
#Partially deleted in new
chr19	48638070	48680225	chr19:48638070-48680225	5	+	48638070	48638070	16724991	4	76,71,129,201,	0,25126,35068,41954,
#Partially deleted in new
chr19	48638070	48680225	chr19:48638070-48680225	5	+	48638070	48638070	16724991	2	76,201,	0,41954,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	48638098	48682245	chr19:48638098-48682245	7	+	48638098	48638098	16724991	5	48,71,137,112,2221,	0,25098,29228,35057,41926,
#Partially deleted in new
chr19	48661406	48673007	chr19:48661406-48673007	3	-	48661676	48670986	789624	7	635,81,54,150,189,651,76,	0,2056,2354,2736,3172,8949,11525,
#Partially deleted in new
chr19	48661964	48673081	chr19:48661964-48673081	0	-	48661964	48664155	789624	6	77,81,54,150,189,150,	0,1498,1796,2178,2614,10967,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	48662474	48673027	chr19:48662474-48673027	0	-	48662474	48662474	8553170	5	1340,150,189,651,96,	0,1668,2104,7881,10457,
#Deleted in new
chr19	48680080	48681020	chr19:48680080-48681020	5	+	48680080	48680080	16724991	1	940,	0,
#Partially deleted in new
chr19	48695970	48703616	chr19:48695970-48703616	0	+	48702956	48703616	789624	2	109,662,	0,6984,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	48695974	48705950	chr19:48695974-48705950	3	+	48702956	48703988	789624	2	115,2996,	0,6980,
#Deleted in new
chr19	48696032	48696643	chr19:48696032-48696643	0	+	48696032	48696032	8553170	2	47,265,	0,346,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	48696038	48705614	chr19:48696038-48705614	1	+	48702956	48703988	789624	3	41,1254,298,	0,6916,9278,
#Partially deleted in new
chr19	48712741	48719721	chr19:48712741-48719721	1	-	48713266	48719031	789624	10	809,55,186,195,103,185,143,39,79,43,	0,974,1118,1624,2064,2520,2883,3963,6232,6937,
#Partially deleted in new
chr19	48712995	48716957	chr19:48712995-48716957	3	-	48713266	48715377	789624	8	555,55,186,195,103,185,293,253,	0,720,864,1370,1810,2266,2629,3709,
#Partially deleted in new
chr19	48712996	48717021	chr19:48712996-48717021	1	-	48713266	48715377	789624	7	554,55,186,103,185,293,317,	0,719,863,1809,2265,2628,3708,
#Partially deleted in new
chr19	48714825	48719713	chr19:48714825-48719713	0	-	48714825	48719031	789624	6	83,185,293,39,79,35,	0,436,799,1879,4148,4853,
#Partially deleted in new
chr19	48715343	48716843	chr19:48715343-48716843	0	-	48715343	48715377	789624	3	103,173,139,	0,281,1361,
#Partially deleted in new
chr19	48720586	48740721	chr19:48720586-48740721	3	-	48720797	48740282	0	12	411,148,173,244,104,152,38,654,356,686,141,201,	0,1267,3750,4130,6198,6420,6806,8350,14609,18373,19559,19934,
#Partially deleted in new
chr19	48720586	48725581	chr19:48720586-48725581	0	-	48720586	48720586	8553170	4	411,148,173,865,	0,1267,3750,4130,
#Partially deleted in new
chr19	48724829	48739018	chr19:48724829-48739018	0	-	48724829	48739018	789624	3	131,356,59,	0,10366,14130,
#Partially deleted in new
chr19	48729552	48738705	chr19:48729552-48738705	0	-	48729552	48729552	8553170	3	38,356,220,	0,5643,8933,
#Deleted in new
chr19	48740851	48741523	chr19:48740851-48741523	0	-	48740851	48740851	8553170	2	177,260,	0,412,
#Partially deleted in new
chr19	48740887	48746909	chr19:48740887-48746909	3	-	48740907	48745859	0	10	141,178,154,101,81,21,87,75,308,475,	0,413,901,1321,2557,3287,3565,4326,4737,5547,
#Partially deleted in new
chr19	48740907	48745859	chr19:48740907-48745859	0	-	48745249	48745859	0	9	121,178,184,101,81,21,87,75,168,	0,393,881,1301,2537,3267,3545,4306,4784,
#Partially deleted in new
chr19	48740907	48745859	chr19:48740907-48745859	0	-	48742260	48745859	0	9	121,178,154,101,118,21,87,75,235,	0,393,881,1301,2500,3267,3545,4306,4717,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	48743031	48746180	chr19:48743031-48746180	0	-	48743031	48743031	8553170	3	1164,87,967,	0,1421,2182,
#Partially deleted in new
chr19	48744463	48746797	chr19:48744463-48746797	0	-	48744463	48744510	789624	3	76,75,70,	0,750,2264,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	48748010	48755390	chr19:48748010-48755390	3	-	48750183	48751281	789624	4	3273,633,239,101,	0,4479,5314,7279,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	48748010	48753660	chr19:48748010-48753660	1	-	48750183	48751281	789624	5	3273,236,231,239,13,	0,4479,4881,5314,5637,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	48752611	48755390	chr19:48752611-48755390	0	-	48752611	48752611	8553170	4	114,231,239,65,	0,280,713,2714,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	48752611	48753660	chr19:48752611-48753660	0	-	48752611	48752611	8553170	3	114,231,336,	0,280,713,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	48752611	48753660	chr19:48752611-48753660	0	-	48752611	48752611	8553170	2	511,336,	0,713,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	48752611	48755390	chr19:48752611-48755390	0	-	48752611	48752611	8553170	3	511,239,65,	0,713,2714,
#Partially deleted in new
chr19	48755558	48758330	chr19:48755558-48758330	3	+	48756236	48758220	0	4	226,581,104,401,	0,332,1367,2371,
#Partially deleted in new
chr19	48756086	48758333	chr19:48756086-48758333	1	+	48756236	48758220	0	3	385,104,404,	0,839,1843,
#Partially deleted in new
chr19	48795061	48811012	chr19:48795061-48811012	1	-	48795425	48811007	0	9	403,75,141,86,143,164,120,111,29,	0,1366,1516,1875,2129,4613,4919,5125,15922,
#Partially deleted in new
chr19	48795064	48811027	chr19:48795064-48811027	1	-	48795425	48806696	789624	12	400,75,141,86,143,164,120,111,201,75,481,44,	0,1363,1513,1872,2126,4610,4916,5122,11452,11935,12691,15919,
#Partially deleted in new
chr19	48795065	48811020	chr19:48795065-48811020	3	-	48795425	48811007	0	11	399,75,141,86,143,164,120,111,201,75,37,	0,1362,1512,1871,2125,4609,4915,5121,11451,11934,15918,
#Partially deleted in new
chr19	48795099	48807074	chr19:48795099-48807074	0	-	48795425	48807074	789624	11	365,183,75,141,86,143,164,120,111,201,75,	0,1047,1328,1478,1837,2091,4575,4881,5087,11417,11900,
#Partially deleted in new
chr19	48795109	48810916	chr19:48795109-48810916	1	-	48795425	48806696	789624	11	355,75,141,86,143,164,120,111,201,75,108,	0,1318,1468,1827,2081,4565,4871,5077,11407,11890,15699,
#Partially deleted in new
chr19	48795864	48811029	chr19:48795864-48811029	1	-	48796349	48811007	789624	8	638,141,86,143,164,120,111,46,	0,713,1072,1326,3810,4116,4322,15119,
#Partially deleted in new
chr19	48796246	48797543	chr19:48796246-48797543	0	-	48796246	48796246	8553170	4	256,141,86,353,	0,331,690,944,
#Partially deleted in new
chr19	48796258	48811027	chr19:48796258-48811027	1	-	48796349	48811007	789624	10	244,141,86,143,164,120,111,201,75,44,	0,319,678,932,3416,3722,3928,10258,10741,14725,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	48798809	48807792	chr19:48798809-48807792	0	-	48798809	48798809	8553170	5	1029,120,111,201,793,	0,1171,1377,7707,8190,
#Partially deleted in new
chr19	48800065	48810921	chr19:48800065-48810921	0	-	48800065	48806696	789624	6	35,111,201,75,481,113,	0,121,6451,6934,7690,10743,
#Partially deleted in new
chr19	48807012	48811029	chr19:48807012-48811029	0	-	48807012	48807012	8553170	3	62,481,46,	0,743,3971,
#Partially deleted in new
chr19	48807788	48811029	chr19:48807788-48811029	0	-	48807788	48807788	8553170	2	523,46,	0,3195,
#Partially deleted in new
chr19	48813016	48836678	chr19:48813016-48836678	3	-	48813174	48836411	0	9	332,97,68,105,92,67,83,39,355,	0,439,646,2020,18651,19649,21259,22788,23307,
#Partially deleted in new
chr19	48813017	48815072	chr19:48813017-48815072	0	-	48813251	48815072	789624	4	331,120,68,36,	0,415,645,2019,
#Partially deleted in new
chr19	48813023	48836510	chr19:48813023-48836510	1	-	48813174	48836411	789624	8	325,97,68,105,87,83,39,187,	0,432,639,2013,19642,21252,22781,23300,
#Partially deleted in new
chr19	48813108	48835823	chr19:48813108-48835823	0	-	48813251	48835823	789624	7	240,68,105,92,67,83,19,	0,554,1928,18559,19557,21167,22696,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr19	48837096	48868632	chr19:48837096-48868632	3	-	48837288	48867620	0	20	455,113,59,162,77,100,141,99,150,81,48,75,280,216,110,101,73,108,90,550,	0,920,2108,4052,8273,8420,10803,15131,16585,16910,17120,20325,21763,22372,23253,24304,24523,28406,30440,30986,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr19	48837096	48868454	chr19:48837096-48868454	1	-	48838045	48867620	0	17	455,113,77,100,141,99,150,81,48,280,216,110,101,73,108,90,372,	0,920,8273,8420,10803,15131,16585,16910,17120,21763,22372,23253,24304,24523,28406,30440,30986,
#Partially deleted in new
chr19	48837109	48845551	chr19:48837109-48845551	0	-	48838045	48845551	789624	5	442,113,162,77,35,	0,907,4039,8260,8407,
#Partially deleted in new
chr19	48837182	48838314	chr19:48837182-48838314	0	-	48837182	48837182	8553170	2	369,298,	0,834,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	48845140	48845596	chr19:48845140-48845596	0	-	48845140	48845140	8553170	2	306,80,	0,376,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	48845192	48852306	chr19:48845192-48852306	0	-	48845192	48845192	8553170	3	424,141,79,	0,2707,7035,
#Partially deleted in new
chr19	48845550	48859382	chr19:48845550-48859382	0	-	48845550	48848010	789624	7	66,141,99,150,81,48,181,	0,2349,6677,8131,8456,8666,13651,
#Partially deleted in new
chr19	48852237	48859374	chr19:48852237-48859374	0	-	48852237	48857433	789624	6	89,150,81,48,75,173,	0,1444,1769,1979,5184,6964,
#Deleted in new
chr19	48858860	48860118	chr19:48858860-48860118	0	-	48858860	48858860	8553170	3	279,216,98,	0,608,1160,
#Partially deleted in new
chr19	48859096	48867595	chr19:48859096-48867595	0	-	48859096	48867595	789624	6	43,216,110,101,73,59,	0,372,1253,2304,2523,8440,
#Partially deleted in new
chr19	48859096	48865557	chr19:48859096-48865557	0	-	48861477	48865557	789624	5	43,216,110,101,55,	0,372,1253,2304,6406,
#Partially deleted in new
chr19	48872391	48876057	chr19:48872391-48876057	3	+	48873233	48875973	0	3	260,1674,444,	0,833,3222,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	48874317	48876042	chr19:48874317-48876042	0	+	48874317	48875093	789624	1	1725,	0,
#Partially deleted in new
chr19	48880964	48898733	chr19:48880964-48898733	3	-	48881010	48897868	789624	13	162,172,99,115,113,312,122,165,138,127,52,33,144,	0,1067,2789,2967,4483,6985,8545,14033,14401,15465,16380,16872,17625,
#Partially deleted in new
chr19	48880970	48882125	chr19:48880970-48882125	0	-	48881010	48882125	789624	2	156,127,	0,1028,
#Partially deleted in new
chr19	48888067	48898633	chr19:48888067-48898633	0	-	48888067	48897868	789624	7	194,122,165,127,52,33,147,	0,1442,6930,8362,9277,9769,10419,
#Partially deleted in new
chr19	48888257	48898382	chr19:48888257-48898382	0	-	48888257	48897868	789624	8	4,122,165,138,118,52,33,104,	0,1252,6740,7108,8181,9087,9579,10021,
#Partially deleted in new
chr19	48889527	48897459	chr19:48889527-48897459	0	-	48889527	48897371	789624	5	104,165,138,127,115,	0,5470,5838,6902,7817,
#Partially deleted in new
chr19	48895374	48896739	chr19:48895374-48896739	0	-	48895374	48895374	8553170	2	129,310,	0,1055,
#Partially deleted in new
chr19	48900049	48923372	chr19:48900049-48923372	3	+	48900796	48922424	0	13	323,146,108,133,104,186,91,59,93,93,171,106,1055,	0,736,4297,5703,11099,12961,13424,18676,18980,19144,21104,21777,22268,
#Partially deleted in new
chr19	48900319	48923271	chr19:48900319-48923271	1	+	48900796	48922424	0	14	53,146,108,133,104,186,91,59,93,93,171,106,148,667,	0,466,4027,5433,10829,12691,13154,18406,18710,18874,20834,21507,21998,22285,
#Partially deleted in new
chr19	48900322	48918744	chr19:48900322-48918744	0	+	48900796	48918744	789624	8	50,146,108,133,104,186,59,78,	0,463,4024,5430,10826,12688,13151,18344,
#Partially deleted in new
chr19	48900338	48922944	chr19:48900338-48922944	0	+	48900338	48900338	8553170	4	34,171,106,627,	0,20815,21488,21979,
#Partially deleted in new
chr19	48900354	48905841	chr19:48900354-48905841	0	+	48900796	48901024	789624	4	18,336,108,89,	0,431,3992,5398,
#Partially deleted in new
chr19	48900369	48905882	chr19:48900369-48905882	0	+	48900796	48905882	789624	4	289,146,108,130,	0,416,3977,5383,
#Partially deleted in new
chr19	48900565	48905841	chr19:48900565-48905841	0	+	48900796	48905841	789624	3	366,108,89,	0,3781,5187,
#Partially deleted in new
chr19	48900797	48919259	chr19:48900797-48919259	0	+	48900797	48919259	789624	9	134,108,78,69,186,91,59,93,66,	0,3549,4955,10386,12213,12676,17928,18232,18396,
#Partially deleted in new
chr19	48910929	48918891	chr19:48910929-48918891	3	-	48910929	48910929	789624	2	245,188,	0,7774,
#Partially deleted in new
chr19	48911217	48921866	chr19:48911217-48921866	0	+	48911217	48911217	8553170	7	35,186,91,59,257,171,40,	0,1793,2256,7508,7812,9936,10609,
#Deleted in new
chr19	48918375	48919148	chr19:48918375-48919148	0	+	48918375	48918375	8553170	2	409,119,	0,654,
#Partially deleted in new
chr19	48918744	48921264	chr19:48918744-48921264	0	+	48918744	48918744	8553170	3	378,93,111,	0,449,2409,
#Partially deleted in new
chr19	48918999	48923268	chr19:48918999-48923268	0	+	48918999	48918999	8553170	4	287,171,106,951,	0,2154,2827,3318,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	48926170	48926444	chr19:48926170-48926444	3	+	48926170	48926170	8553170	1	274,	0,
#Partially deleted in new
chr19	48933681	48944969	chr19:48933681-48944969	3	+	48933721	48944933	789624	7	130,112,164,253,125,151,146,	0,1318,2350,5767,8758,10675,11142,
#Partially deleted in new
chr19	48933701	48944959	chr19:48933701-48944959	1	+	48933721	48944933	789624	5	110,112,125,151,136,	0,1298,8738,10655,11122,
#Partially deleted in new
chr19	48933704	48944963	chr19:48933704-48944963	1	+	48933721	48944933	789624	5	107,112,164,253,140,	0,1295,2327,5744,11119,
#Partially deleted in new
chr19	48933757	48944968	chr19:48933757-48944968	0	+	48933757	48939696	789624	5	54,112,253,151,145,	0,1242,5691,10599,11066,
#Partially deleted in new
chr19	48954814	48961704	chr19:48954814-48961704	0	+	48954814	48954814	8553170	5	785,147,136,105,173,	0,872,1383,5995,6717,
#Partially deleted in new
chr19	48954876	48961798	chr19:48954876-48961798	3	+	48954928	48961636	0	6	86,52,147,136,105,267,	0,671,810,1321,5933,6655,
#Partially deleted in new
chr19	48954896	48961713	chr19:48954896-48961713	0	+	48954896	48954896	8553170	5	66,286,136,105,182,	0,651,1301,5913,6635,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	48954928	48961798	chr19:48954928-48961798	1	+	48954928	48961097	0	5	34,52,147,136,989,	0,619,758,1269,5881,
#Partially deleted in new
chr19	48954928	48961637	chr19:48954928-48961637	1	+	48954928	48961636	0	5	34,52,136,105,106,	0,619,1269,5881,6603,
#Partially deleted in new
chr19	48954928	48961795	chr19:48954928-48961795	1	+	48954928	48961636	789624	6	36,27,119,136,105,264,	0,758,786,1269,5881,6603,
#Partially deleted in new
chr19	48954928	48961636	chr19:48954928-48961636	1	+	48954928	48961636	0	6	34,52,147,136,105,66,	0,619,758,1269,5881,6642,
#Partially deleted in new
chr19	48954928	48961639	chr19:48954928-48961639	0	+	48954928	48961636	789624	4	34,136,105,108,	0,1269,5881,6603,
#Deleted in new
chr19	48954928	48956316	chr19:48954928-48956316	0	+	48954928	48955778	0	3	34,147,119,	0,758,1269,
#Partially deleted in new
chr19	48954928	48961097	chr19:48954928-48961097	1	+	48956198	48961097	789624	3	34,136,288,	0,1269,5881,
#Partially deleted in new
chr19	48955507	48960835	chr19:48955507-48960835	0	+	48955507	48955507	8553170	3	326,136,26,	0,690,5302,
#Partially deleted in new
chr19	48955852	48961197	chr19:48955852-48961197	0	+	48955852	48955852	8553170	2	481,388,	0,4957,
#Deleted in new
chr19	48963974	48965158	chr19:48963974-48965158	3	+	48963974	48963974	8553170	2	390,429,	0,755,
#Deleted in new
chr19	48963989	48965029	chr19:48963989-48965029	0	+	48963989	48963989	8553170	2	502,268,	0,772,
#Deleted in new
chr19	48965300	48966878	chr19:48965300-48966878	3	+	48965507	48966735	0	4	309,147,126,296,	0,469,980,1282,
#Partially deleted in new
chr19	48968124	48993309	chr19:48968124-48993309	3	-	48969287	48993112	789624	16	1487,81,164,96,127,114,79,60,107,121,118,145,186,192,182,315,	0,1650,2421,2803,6088,6495,9799,9973,13405,14130,14595,17336,17725,19069,23177,24870,
#Partially deleted in new
chr19	48968129	48993310	chr19:48968129-48993310	1	-	48969287	48993112	789624	15	1482,81,164,96,127,114,79,60,107,121,118,145,186,182,316,	0,1645,2416,2798,6083,6490,9794,9968,13400,14125,14590,17331,17720,23172,24865,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	48970282	48970709	chr19:48970282-48970709	0	-	48970368	48970709	789624	1	427,	0,
#Partially deleted in new
chr19	48970749	48977986	chr19:48970749-48977986	0	-	48970749	48970749	8553170	4	274,127,114,63,	0,3463,3870,7174,
#Partially deleted in new
chr19	48970943	48978233	chr19:48970943-48978233	0	-	48970943	48970943	8553170	5	80,127,114,79,136,	0,3269,3676,6980,7154,
#Partially deleted in new
chr19	48981430	48985474	chr19:48981430-48985474	0	-	48981430	48981430	8553170	4	206,121,118,14,	0,824,1289,4030,
#Partially deleted in new
chr19	48987193	48993283	chr19:48987193-48993283	0	-	48987193	48987193	8553170	3	192,237,289,	0,4108,5801,
#Partially deleted in new
chr19	48993447	49015995	chr19:48993447-49015995	3	+	48993911	49015842	0	15	476,55,56,142,130,67,107,94,124,95,119,120,130,115,179,	0,5871,9831,10829,13570,13854,16328,16525,17040,17551,17744,21036,21573,22124,22369,
#Partially deleted in new
chr19	48993561	49015892	chr19:48993561-49015892	1	+	49004288	49015650	789624	14	341,55,56,142,130,67,107,94,124,95,119,120,115,76,	0,5757,9717,10715,13456,13740,16214,16411,16926,17437,17630,20922,22010,22255,
#Partially deleted in new
chr19	48993615	49007368	chr19:48993615-49007368	0	+	49004288	49007368	789624	5	287,56,142,130,67,	0,9663,10661,13402,13686,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	48993888	49004382	chr19:48993888-49004382	0	+	48993911	48994298	789624	6	35,166,154,55,56,106,	0,287,891,5430,9390,10388,
#Partially deleted in new
chr19	48993889	49010340	chr19:48993889-49010340	0	+	48993889	48993889	8553170	8	34,55,56,142,130,67,107,368,	0,5429,9389,10387,13128,13412,15886,16083,
#Partially deleted in new
chr19	48993897	49015929	chr19:48993897-49015929	0	+	48993911	49004236	789624	15	26,55,56,212,130,67,107,94,124,95,119,120,130,115,113,	0,5421,9381,10309,13120,13404,15878,16075,16590,17101,17294,20586,21123,21674,21919,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	48993897	48999364	chr19:48993897-48999364	0	+	48993897	48993897	8553170	3	26,429,42,	0,607,5425,
#Partially deleted in new
chr19	48993898	49015926	chr19:48993898-49015926	0	+	48993911	49011002	789624	15	25,55,56,142,130,67,96,94,124,95,119,120,130,115,110,	0,5420,9380,10378,13119,13403,15877,16074,16589,17100,17293,20585,21122,21673,21918,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	48993909	49009882	chr19:48993909-49009882	0	+	48993911	49001401	789624	8	14,55,242,56,142,130,67,107,	0,5409,7439,9369,10367,13108,13392,15866,
#Partially deleted in new
chr19	48999306	49004236	chr19:48999306-49004236	1	+	48999306	49004236	789624	3	67,56,30,	0,3972,4900,
#Partially deleted in new
chr19	48999318	49015894	chr19:48999318-49015894	0	+	48999318	48999318	8553170	13	55,56,142,130,67,107,639,95,119,120,130,115,78,	0,3960,4958,7699,7983,10457,10654,11680,11873,15165,15702,16253,16498,
#Partially deleted in new
chr19	49004288	49015650	chr19:49004288-49015650	1	+	49004288	49015650	789624	10	130,130,67,107,94,124,95,119,120,79,	0,2729,3013,5487,5684,6199,6710,6903,10195,11283,
#Deleted in new
chr19	49009905	49009972	chr19:49009905-49009972	3	+	49009905	49009905	5263520	1	67,	0,
#Deleted in new
chr19	49015250	49015926	chr19:49015250-49015926	0	+	49015250	49015250	8553170	2	436,110,	0,566,
#Deleted in new
chr19	49015979	49017081	chr19:49015979-49017081	1	-	49016067	49017081	0	3	331,168,15,	0,567,1087,
#Deleted in new
chr19	49015979	49017091	chr19:49015979-49017091	3	-	49016067	49017081	789624	3	331,168,25,	0,567,1087,
#Deleted in new
chr19	49016074	49016820	chr19:49016074-49016820	0	-	49016074	49016074	8553170	2	236,274,	0,472,
#Deleted in new
chr19	49017495	49020523	chr19:49017495-49020523	3	-	49017967	49020515	789624	5	845,128,162,201,149,	0,1377,2151,2413,2879,
#Deleted in new
chr19	49018246	49019484	chr19:49018246-49019484	0	-	49018246	49018246	789624	3	94,128,271,	0,626,967,
#Deleted in new
chr19	49022868	49024333	chr19:49022868-49024333	3	-	49022885	49023971	0	3	332,168,377,	0,567,1088,
#Partially deleted in new
chr19	49022952	49036895	chr19:49022952-49036895	3	-	49022952	49023576	789624	3	248,168,370,	0,483,13573,
#Partially deleted in new
chr19	49023145	49036885	chr19:49023145-49036885	0	-	49023145	49036711	789624	3	55,168,183,	0,290,13557,
#Deleted in new
chr19	49025460	49026020	chr19:49025460-49026020	7	-	49025460	49025460	16724991	1	560,	0,
#Deleted in new
chr19	49029725	49030341	chr19:49029725-49030341	7	+	49029725	49029725	16724991	1	616,	0,
#Deleted in new
chr19	49031911	49033154	chr19:49031911-49033154	0	+	49032530	49033154	789624	3	359,168,248,	0,592,995,
#Deleted in new
chr19	49031977	49033238	chr19:49031977-49033238	3	+	49032095	49033221	789624	3	127,168,332,	0,526,929,
#Deleted in new
chr19	49035609	49036816	chr19:49035609-49036816	3	-	49035609	49036711	789624	3	291,168,114,	0,526,1093,
#Deleted in new
chr19	49035652	49036895	chr19:49035652-49036895	0	-	49035652	49036276	789624	3	248,168,370,	0,483,873,
#Deleted in new
chr19	49038478	49039038	chr19:49038478-49039038	7	-	49038478	49038478	16724991	1	560,	0,
#Deleted in new
chr19	49042173	49042731	chr19:49042173-49042731	7	+	49042173	49042173	16724991	1	558,	0,
#Deleted in new
chr19	49043883	49045311	chr19:49043883-49045311	3	+	49044209	49045294	0	3	341,168,332,	0,693,1096,
#Deleted in new
chr19	49047637	49049106	chr19:49047637-49049106	3	-	49047654	49048739	0	3	332,168,382,	0,567,1087,
#Deleted in new
chr19	49050216	49050846	chr19:49050216-49050846	7	-	49050216	49050216	16724991	1	630,	0,
#Deleted in new
chr19	49054274	49055779	chr19:49054274-49055779	1	-	49054290	49055375	789624	3	331,168,419,	0,566,1086,
#Deleted in new
chr19	49054274	49057751	chr19:49054274-49057751	1	-	49054290	49055375	789624	5	331,168,1235,128,87,	0,566,1086,2846,3390,
#Deleted in new
chr19	49054274	49058860	chr19:49054274-49058860	3	-	49054290	49055375	789624	5	331,168,1235,937,715,	0,566,1086,2846,3871,
#Partially deleted in new
chr19	49055792	49065076	chr19:49055792-49065076	3	-	49058039	49061997	789624	7	803,76,163,201,255,124,126,	0,1328,2102,2353,5962,7946,9158,
#Deleted in new
chr19	49056087	49057745	chr19:49056087-49057745	5	-	49056087	49056087	16724991	3	508,128,284,	0,1033,1374,
#Deleted in new
chr19	49056268	49058745	chr19:49056268-49058745	7	-	49056268	49056268	16724991	5	327,128,163,201,134,	0,852,1626,1877,2343,
#Deleted in new
chr19	49057857	49058761	chr19:49057857-49058761	5	-	49057857	49057857	16724991	3	200,201,150,	0,288,754,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	49060612	49061132	chr19:49060612-49061132	3	+	49060612	49060612	8553170	1	520,	0,
#Deleted in new
chr19	49061065	49061997	chr19:49061065-49061997	3	-	49061364	49061997	0	1	932,	0,
#Partially deleted in new
chr19	49061567	49065054	chr19:49061567-49065054	0	-	49061567	49061997	789624	4	442,124,143,104,	0,2171,2585,3383,
#Partially deleted in new
chr19	49063738	49064841	chr19:49063738-49064841	0	-	49063738	49063738	8553170	2	124,154,	0,949,
#Partially deleted in new
chr19	49064258	49064856	chr19:49064258-49064856	3	+	49064258	49064258	8553170	1	598,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	49067417	49072941	chr19:49067417-49072941	3	-	49070062	49072585	789624	2	3461,911,	0,4613,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	49081331	49081630	chr19:49081331-49081630	3	+	49081331	49081331	8553170	1	299,	0,
#Partially deleted in new
chr19	49085418	49108598	chr19:49085418-49108598	0	+	49086414	49102139	0	11	218,157,63,55,65,63,82,60,102,88,804,	0,986,4872,5047,13008,13223,15971,16695,19215,22206,22376,
#Partially deleted in new
chr19	49085422	49108479	chr19:49085422-49108479	3	+	49086414	49108443	0	10	214,157,63,55,65,63,82,102,88,685,	0,982,4868,5043,13004,13219,15967,19211,22202,22372,
#Partially deleted in new
chr19	49085422	49102118	chr19:49085422-49102118	0	+	49090341	49102118	789624	7	214,63,55,65,63,82,5,	0,4868,5043,13004,13219,15967,16691,
#Partially deleted in new
chr19	49085450	49108563	chr19:49085450-49108563	1	+	49086414	49108443	0	10	186,157,63,55,65,63,82,102,88,742,	0,954,4840,5015,12976,13191,15939,19183,22174,22371,
#Partially deleted in new
chr19	49085450	49108603	chr19:49085450-49108603	0	+	49086414	49102139	0	11	186,157,63,55,65,63,82,1474,102,88,809,	0,954,4840,5015,12976,13191,15939,16663,19183,22174,22344,
#Partially deleted in new
chr19	49085450	49090639	chr19:49085450-49090639	0	+	49085450	49085450	8553170	4	186,157,63,174,	0,954,4840,5015,
#Partially deleted in new
chr19	49085494	49108605	chr19:49085494-49108605	0	+	49086414	49102139	0	11	142,157,63,55,65,63,82,72,102,88,784,	0,910,4796,4971,12932,13147,15895,16619,19139,22130,22327,
#Partially deleted in new
chr19	49086479	49098459	chr19:49086479-49098459	0	+	49090341	49098459	789624	5	82,144,63,55,33,	0,1154,3811,3986,11947,
#Partially deleted in new
chr19	49086523	49101668	chr19:49086523-49101668	0	+	49086523	49086523	8553170	6	38,63,55,65,63,279,	0,3767,3942,11903,12118,14866,
#Partially deleted in new
chr19	49102410	49108602	chr19:49102410-49108602	0	+	49102410	49102410	8553170	3	2325,88,808,	0,5214,5384,
#Partially deleted in new
chr19	49114323	49118460	chr19:49114323-49118460	1	+	49114404	49118373	0	5	118,119,72,164,109,	0,525,936,3531,4028,
#Partially deleted in new
chr19	49114360	49118460	chr19:49114360-49118460	3	+	49114404	49118373	0	6	81,119,72,210,164,109,	0,488,899,1902,3494,3991,
#Deleted in new
chr19	49114423	49115489	chr19:49114423-49115489	0	+	49114423	49115469	789624	3	18,119,230,	0,425,836,
#Partially deleted in new
chr19	49114465	49118460	chr19:49114465-49118460	0	+	49114465	49114465	8553170	5	502,72,210,164,109,	0,794,1797,3389,3886,
#Partially deleted in new
chr19	49115225	49118059	chr19:49115225-49118059	0	+	49115225	49115225	8553170	3	106,210,205,	0,1037,2629,
#Partially deleted in new
chr19	49116117	49117995	chr19:49116117-49117995	0	+	49116117	49116117	8553170	2	355,141,	0,1737,
#Deleted in new
chr19	49118396	49119140	chr19:49118396-49119140	3	-	49118632	49119022	789624	1	744,	0,
#Partially deleted in new
chr19	49119388	49151021	chr19:49119388-49151021	3	+	49127873	49150138	789624	30	334,255,102,165,75,75,222,147,135,84,132,63,80,145,188,223,164,128,94,82,201,63,27,176,98,176,69,172,72,786,	0,8470,8978,9459,9991,10604,10989,13612,13848,14407,14645,15250,15447,16390,17335,18816,20279,20572,22031,22645,23415,26554,26777,28694,29277,29604,29868,30158,30691,30847,
#Partially deleted in new
chr19	49119663	49150279	chr19:49119663-49150279	0	+	49127873	49139773	789624	29	59,255,102,165,75,75,222,147,135,84,132,63,80,145,188,164,128,94,82,201,63,27,176,98,176,69,172,72,44,	0,8195,8703,9184,9716,10329,10714,13337,13573,14132,14370,14975,15172,16115,17060,20004,20297,21756,22370,23140,26279,26502,28419,29002,29329,29593,29883,30416,30572,
#Partially deleted in new
chr19	49125350	49128945	chr19:49125350-49128945	0	+	49127873	49128945	789624	4	92,255,102,98,	0,2508,3016,3497,
#Partially deleted in new
chr19	49127873	49151026	chr19:49127873-49151026	1	+	49127873	49150138	789624	28	240,102,165,75,75,222,147,135,84,132,63,80,145,188,223,164,128,94,82,201,63,176,98,176,69,172,72,770,	0,493,974,1506,2119,2504,5127,5363,5922,6160,6765,6962,7905,8850,10331,11794,12087,13546,14160,14930,18069,20209,20792,21119,21383,21673,22206,22383,
#Deleted in new
chr19	49128019	49130428	chr19:49128019-49130428	0	+	49128019	49128019	8553170	4	449,165,75,51,	0,828,1360,2358,
#Partially deleted in new
chr19	49128288	49137240	chr19:49128288-49137240	0	+	49128288	49128288	8553170	13	180,165,75,75,222,147,135,84,132,63,80,145,517,	0,559,1091,1704,2089,4712,4948,5507,5745,6350,6547,7490,8435,
#Partially deleted in new
chr19	49128326	49142918	chr19:49128326-49142918	0	+	49128326	49128326	8553170	18	142,165,75,75,222,147,135,84,132,63,80,145,188,164,128,94,82,115,	0,521,1053,1666,2051,4674,4910,5469,5707,6312,6509,7452,8397,11341,11634,13093,13707,14477,
#Deleted in new
chr19	49128579	49130599	chr19:49128579-49130599	0	+	49128579	49128579	8553170	4	433,75,75,222,	0,800,1413,1798,
#Partially deleted in new
chr19	49142983	49151026	chr19:49142983-49151026	0	+	49142983	49150138	789624	9	21,63,176,98,176,69,172,72,791,	0,2959,5099,5682,6009,6273,6563,7096,7252,
#Deleted in new
chr19	49145686	49146408	chr19:49145686-49146408	0	+	49145686	49145686	8553170	2	319,243,	0,479,
#Deleted in new
chr19	49148100	49151021	chr19:49148100-49151021	0	+	49148100	49150138	789624	6	158,98,176,69,172,942,	0,565,892,1156,1446,1979,
#Deleted in new
chr19	49148572	49150354	chr19:49148572-49150354	0	+	49148572	49148572	8553170	6	191,176,69,172,72,119,	0,420,684,974,1507,1663,
#Deleted in new
chr19	49149957	49151021	chr19:49149957-49151021	0	+	49149957	49149957	8553170	2	194,786,	0,278,
#Partially deleted in new
chr19	49151197	49155424	chr19:49151197-49155424	3	-	49151295	49155237	789624	6	135,37,55,69,71,2018,	0,319,806,1112,2063,2209,
#Partially deleted in new
chr19	49151198	49153435	chr19:49151198-49153435	0	-	49151212	49153435	789624	4	134,69,71,29,	0,1111,2062,2208,
#Partially deleted in new
chr19	49151288	49155243	chr19:49151288-49155243	1	-	49151295	49155237	789624	5	44,37,55,71,1837,	0,228,715,1972,2118,
#Partially deleted in new
chr19	49151954	49153307	chr19:49151954-49153307	0	-	49151954	49151954	8553170	2	424,47,	0,1306,
#Partially deleted in new
chr19	49157740	49211836	chr19:49157740-49211836	3	+	49157866	49211498	0	25	150,68,175,181,164,184,62,192,100,113,345,135,130,146,113,78,435,133,175,178,197,133,73,106,343,	0,451,8300,10176,10519,10812,13616,13837,14268,23608,24837,25337,30900,31205,32467,32955,38699,42559,42870,44223,52468,52969,53274,53423,53753,
#Partially deleted in new
chr19	49157740	49171373	chr19:49157740-49171373	0	+	49157866	49171373	789624	5	150,68,175,184,17,	0,451,8300,10812,13616,
#Partially deleted in new
chr19	49157765	49211834	chr19:49157765-49211834	0	+	49157866	49171392	789624	20	125,68,184,62,192,345,135,130,146,113,78,435,133,175,178,197,133,73,106,341,	0,426,10787,13591,13812,24812,25312,30875,31180,32442,32930,38674,42534,42845,44198,52443,52944,53249,53398,53728,
#Partially deleted in new
chr19	49157791	49211836	chr19:49157791-49211836	0	+	49157866	49168401	789624	23	99,68,164,184,62,192,100,113,345,135,130,146,113,78,435,133,175,178,197,133,73,106,343,	0,400,10468,10761,13565,13786,14217,23557,24786,25286,30849,31154,32416,32904,38648,42508,42819,44172,52417,52918,53223,53372,53702,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	49157791	49159921	chr19:49157791-49159921	1	+	49157866	49158263	789624	2	99,1730,	0,400,
#Partially deleted in new
chr19	49157814	49211680	chr19:49157814-49211680	1	+	49157866	49211498	0	24	76,68,175,181,164,184,62,192,100,113,345,135,130,146,113,78,133,175,178,197,133,73,106,187,	0,377,8226,10102,10445,10738,13542,13763,14194,23534,24763,25263,30826,31131,32393,32881,42485,42796,44149,52394,52895,53200,53349,53679,
#Partially deleted in new
chr19	49157831	49211749	chr19:49157831-49211749	0	+	49157831	49157831	8553170	23	59,68,175,181,164,184,62,192,100,345,135,451,113,78,435,133,175,178,197,133,73,106,256,	0,360,8209,10085,10428,10721,13525,13746,14177,24746,25246,30809,32376,32864,38608,42468,42779,44132,52377,52878,53183,53332,53662,
#Partially deleted in new
chr19	49157831	49211749	chr19:49157831-49211749	0	+	49157866	49171392	789624	24	59,68,175,164,184,62,192,100,113,290,135,130,146,113,78,435,133,175,178,197,133,73,106,256,	0,360,8209,10428,10721,13525,13746,14177,23517,24746,25246,30809,31114,32376,32864,38608,42468,42779,44132,52377,52878,53183,53332,53662,
#Deleted in new
chr19	49167643	49168337	chr19:49167643-49168337	0	+	49167643	49167643	8553170	2	454,78,	0,616,
#Partially deleted in new
chr19	49168626	49182755	chr19:49168626-49182755	0	+	49168626	49168626	8553170	5	110,62,192,100,178,	0,2730,2951,3382,13951,
#Partially deleted in new
chr19	49182525	49211836	chr19:49182525-49211836	0	+	49182525	49182525	8553170	14	397,135,451,113,78,435,133,175,178,197,133,73,106,343,	0,552,6115,7682,8170,13914,17774,18085,19438,27683,28184,28489,28638,28968,
#Partially deleted in new
chr19	49188867	49196716	chr19:49188867-49196716	0	+	49188867	49188867	8553170	3	224,78,277,	0,1828,7572,
#Partially deleted in new
chr19	49210600	49211400	chr19:49210600-49211400	0	+	49210600	49210600	8553170	3	242,73,237,	0,414,563,
#Partially deleted in new
chr19	49210733	49211834	chr19:49210733-49211834	0	+	49210733	49211209	789624	2	109,671,	0,430,
#Deleted in new
chr19	49255471	49256102	chr19:49255471-49256102	7	-	49255471	49255471	16724991	3	124,154,91,	0,207,540,
#Deleted in new
chr19	49275118	49275420	chr19:49275118-49275420	7	+	49275118	49275118	16724991	1	302,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	49289637	49325225	chr19:49289637-49325225	3	-	49290122	49311347	789624	12	755,163,160,202,187,242,111,176,127,158,479,178,	0,967,3585,4189,4729,19238,19663,20013,20402,20715,21295,35410,
#Partially deleted in new
chr19	49289764	49325185	chr19:49289764-49325185	1	-	49290565	49311347	789624	11	1003,160,202,187,242,111,176,127,158,479,138,	0,3458,4062,4602,19111,19536,19886,20275,20588,21168,35283,
#Partially deleted in new
chr19	49290690	49325215	chr19:49290690-49325215	0	-	49290690	49294417	789624	5	77,160,202,187,168,	0,2532,3136,3676,34357,
#Partially deleted in new
chr19	49293149	49325132	chr19:49293149-49325132	0	-	49293149	49293149	8553170	4	233,202,187,85,	0,677,1217,31898,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	49305756	49308952	chr19:49305756-49308952	0	-	49306107	49308952	789624	2	376,77,	0,3119,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	49305884	49310146	chr19:49305884-49310146	0	-	49306084	49310146	789624	4	248,111,176,107,	0,3416,3766,4155,
#Deleted in new
chr19	49308796	49308868	chr19:49308796-49308868	3	-	49308796	49308796	5263520	1	72,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	49331616	49340282	chr19:49331616-49340282	2	-	49331616	49331616	8553170	3	216,243,52,	0,437,8614,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	49331658	49340303	chr19:49331658-49340303	1	-	49331658	49331658	8553170	3	174,267,132,	0,395,8513,
#Partially deleted in new
chr19	49335170	49340602	chr19:49335170-49340602	0	+	49335540	49337754	789624	9	123,115,73,125,75,404,237,84,352,	0,324,543,1738,1976,2455,3529,4159,5080,
#Partially deleted in new
chr19	49335204	49337682	chr19:49335204-49337682	0	+	49335204	49335204	8553170	6	118,115,73,125,75,57,	0,290,509,1704,1942,2421,
#Partially deleted in new
chr19	49335395	49340575	chr19:49335395-49340575	1	+	49336970	49340328	789624	8	180,73,125,75,105,237,84,325,	0,318,1513,1751,2529,3304,3934,4855,
#Partially deleted in new
chr19	49335395	49340132	chr19:49335395-49340132	1	+	49336970	49339458	789624	7	180,73,125,75,105,237,803,	0,318,1513,1751,2529,3304,3934,
#Partially deleted in new
chr19	49335399	49340606	chr19:49335399-49340606	3	+	49335540	49340328	789624	8	210,73,125,75,105,237,84,356,	0,314,1509,1747,2525,3300,3930,4851,
#Partially deleted in new
chr19	49335399	49340466	chr19:49335399-49340466	0	+	49335540	49337952	789624	8	210,69,125,75,105,237,84,216,	0,314,1509,1747,2525,3300,3930,4851,
#Partially deleted in new
chr19	49335405	49337961	chr19:49335405-49337961	0	+	49335405	49335405	8553170	4	381,125,75,37,	0,1503,1741,2519,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	49335417	49340606	chr19:49335417-49340606	0	+	49335417	49335417	8553170	6	158,1320,75,105,237,1277,	0,296,1729,2507,3282,3912,
#Partially deleted in new
chr19	49335426	49340205	chr19:49335426-49340205	1	+	49335540	49339458	789624	7	183,73,125,75,105,237,876,	0,287,1482,1720,2498,3273,3903,
#Partially deleted in new
chr19	49335433	49338201	chr19:49335433-49338201	0	+	49335433	49335433	8553170	6	176,73,125,75,105,46,	0,280,1475,1713,2491,2722,
#Partially deleted in new
chr19	49335445	49337246	chr19:49335445-49337246	0	+	49335445	49335445	8553170	3	341,125,100,	0,1463,1701,
#Partially deleted in new
chr19	49335456	49337163	chr19:49335456-49337163	0	+	49336970	49337163	789624	4	119,69,125,17,	0,257,1452,1690,
#Partially deleted in new
chr19	49335463	49337217	chr19:49335463-49337217	0	+	49335540	49337217	789624	5	146,73,144,125,71,	0,250,422,1445,1683,
#Partially deleted in new
chr19	49337214	49340027	chr19:49337214-49340027	0	+	49337214	49339987	789624	5	7,105,237,84,370,	0,710,1485,2115,2443,
#Partially deleted in new
chr19	49340594	49362457	chr19:49340594-49362457	3	-	49341323	49360075	0	12	843,153,168,174,143,65,59,108,63,65,238,85,	0,1843,2636,6595,8108,10706,14553,14717,16657,18840,19249,21778,
#Partially deleted in new
chr19	49340594	49362382	chr19:49340594-49362382	1	-	49341323	49360075	0	13	843,153,168,174,143,65,59,108,12,63,65,238,50,	0,1843,2636,6595,8108,10706,14553,14717,15364,16657,18840,19249,21738,
#Partially deleted in new
chr19	49340594	49361495	chr19:49340594-49361495	1	-	49341323	49360075	0	13	843,153,168,174,143,65,59,108,12,63,65,238,100,	0,1843,2636,6595,8108,10706,14553,14717,15364,16657,18840,19249,20801,
#Partially deleted in new
chr19	49340594	49343335	chr19:49340594-49343335	0	+	49340594	49340594	8553170	2	266,53,	0,2688,
#Partially deleted in new
chr19	49340594	49362407	chr19:49340594-49362407	1	-	49341323	49360075	0	12	843,153,168,174,143,65,59,117,63,65,238,79,	0,1843,2636,6595,8108,10706,14553,14708,16657,18840,19249,21734,
#Partially deleted in new
chr19	49340599	49360438	chr19:49340599-49360438	1	-	49341323	49360075	0	11	838,153,168,174,143,65,59,117,63,65,595,	0,1838,2631,6590,8103,10701,14548,14703,16652,18835,19244,
#Partially deleted in new
chr19	49341081	49362441	chr19:49341081-49362441	1	-	49341323	49355386	0	12	356,153,168,174,143,65,59,117,12,63,65,69,	0,1356,2149,6108,7621,10219,14066,14221,14877,16170,18353,21291,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	49347223	49357255	chr19:49347223-49357255	0	-	49349016	49357255	789624	6	140,143,103,59,117,4,	0,1479,1733,7924,8079,10028,
#Partially deleted in new
chr19	49347232	49357256	chr19:49347232-49357256	0	-	49347232	49347232	8553170	6	192,143,65,59,117,5,	0,1470,4068,7915,8070,10019,
#Partially deleted in new
chr19	49347356	49362441	chr19:49347356-49362441	0	-	49347356	49355386	789624	8	7,143,65,59,108,63,65,69,	0,1346,3944,7791,7955,9895,12078,15016,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	49356151	49357769	chr19:49356151-49357769	3	+	49356151	49356151	8553170	2	115,379,	0,1239,
#Partially deleted in new
chr19	49359304	49359857	chr19:49359304-49359857	0	-	49359304	49359304	8553170	2	195,14,	0,539,
#Partially deleted in new
chr19	49361782	49375116	chr19:49361782-49375116	1	+	49374725	49375028	789624	2	124,400,	0,12934,
#Partially deleted in new
chr19	49363073	49374961	chr19:49363073-49374961	0	+	49365550	49374961	789624	5	115,173,141,93,245,	0,1508,2435,2719,11643,
#Partially deleted in new
chr19	49363593	49375116	chr19:49363593-49375116	3	+	49363998	49375028	789624	5	415,173,141,93,400,	0,988,1915,2199,11123,
#Partially deleted in new
chr19	49363729	49374899	chr19:49363729-49374899	0	+	49365550	49374899	789624	5	185,173,141,93,183,	0,852,1779,2063,10987,
#Partially deleted in new
chr19	49363933	49374991	chr19:49363933-49374991	0	+	49363998	49374991	789624	4	75,173,141,275,	0,648,1575,10783,
#Partially deleted in new
chr19	49364654	49375116	chr19:49364654-49375116	0	+	49364654	49375028	789624	2	100,400,	0,10062,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	49368704	49388081	chr19:49368704-49388081	3	-	49368704	49368704	789624	3	2439,98,726,	0,14146,18651,
#Partially deleted in new
chr19	49388217	49417994	chr19:49388217-49417994	3	+	49390883	49417510	789624	20	110,138,105,187,65,67,162,118,51,78,57,60,65,88,123,59,46,65,108,626,	0,2571,6258,6888,7551,9433,9764,10807,11239,18668,19022,19394,20749,20978,21535,24750,26733,28797,28941,29151,
#Partially deleted in new
chr19	49388218	49394896	chr19:49388218-49394896	0	+	49388218	49388218	8553170	2	109,421,	0,6257,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	49388282	49399805	chr19:49388282-49399805	0	+	49388282	49388282	8553170	10	45,778,138,105,187,65,67,162,118,349,	0,1278,2506,6193,6823,7486,9368,9699,10742,11174,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	49388282	49395789	chr19:49388282-49395789	0	+	49394513	49395789	789624	6	45,138,74,105,187,21,	0,2506,5063,6193,6823,7486,
#Partially deleted in new
chr19	49388286	49394866	chr19:49388286-49394866	0	+	49388286	49388286	8553170	3	41,138,391,	0,2502,6189,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	49388296	49395134	chr19:49388296-49395134	0	+	49390883	49391771	789624	6	31,138,96,74,105,29,	0,2492,3389,5049,6179,6809,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	49388299	49393743	chr19:49388299-49393743	0	+	49388299	49388299	8553170	3	28,138,398,	0,2489,5046,
#Partially deleted in new
chr19	49388300	49395265	chr19:49388300-49395265	0	+	49394513	49395265	789624	5	27,138,101,105,160,	0,2488,3380,6175,6805,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	49388316	49398121	chr19:49388316-49398121	0	+	49393399	49398121	789624	8	11,138,55,105,187,65,67,140,	0,2472,5029,6159,6789,7452,9334,9665,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	49388379	49398093	chr19:49388379-49398093	0	+	49390883	49398093	789624	7	102,138,105,187,65,67,112,	0,2409,6096,6726,7389,9271,9602,
#Partially deleted in new
chr19	49394542	49417989	chr19:49394542-49417989	0	+	49394542	49417510	789624	18	38,187,65,67,162,118,51,78,57,60,65,88,117,59,46,65,108,621,	0,563,1226,3108,3439,4482,4914,12343,12697,13069,14424,14653,15216,18425,20408,22472,22616,22826,
#Partially deleted in new
chr19	49395691	49409031	chr19:49395691-49409031	0	+	49395691	49395691	8553170	9	142,67,162,118,51,78,57,60,65,	0,1959,2290,3333,3765,11194,11548,11920,13275,
#Partially deleted in new
chr19	49397931	49399470	chr19:49397931-49399470	0	+	49397931	49397931	8553170	2	212,446,	0,1093,
#Partially deleted in new
chr19	49407636	49415619	chr19:49407636-49415619	0	+	49407636	49407636	8553170	6	35,65,88,123,59,669,	0,1330,1559,2116,5331,7314,
#Partially deleted in new
chr19	49408272	49409862	chr19:49408272-49409862	0	+	49408272	49408272	8553170	3	25,317,110,	0,694,1480,
#Deleted in new
chr19	49422413	49423441	chr19:49422413-49423441	3	-	49422467	49423339	789624	2	229,230,	0,798,
#Partially deleted in new
chr19	49423748	49428818	chr19:49423748-49428818	3	+	49426430	49428818	789624	5	261,37,1204,174,200,	0,1704,2661,4197,4870,
#Deleted in new
chr19	49426430	49428818	chr19:49426430-49428818	1	+	49426430	49428818	789624	3	1183,174,200,	0,1515,2188,
#Partially deleted in new
chr19	49429400	49441551	chr19:49429400-49441551	3	-	49430518	49441379	789624	12	1412,128,111,133,150,143,87,88,115,119,253,234,	0,1614,1937,3118,3410,4325,4559,5201,5367,5767,7148,11917,
#Partially deleted in new
chr19	49429985	49442360	chr19:49429985-49442360	1	-	49430518	49436662	789624	12	827,128,111,133,150,143,87,88,115,119,253,83,	0,1029,1352,2533,2825,3740,3974,4616,4782,5182,6563,12292,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	49430754	49436180	chr19:49430754-49436180	0	-	49430754	49430754	8553170	10	58,128,111,133,150,143,87,88,113,1013,	0,260,583,1764,2056,2971,3205,3847,4013,4413,
#Partially deleted in new
chr19	49432621	49434661	chr19:49432621-49434661	0	-	49432983	49434661	789624	5	30,233,143,87,60,	0,189,1104,1338,1980,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	49433258	49438314	chr19:49433258-49438314	0	-	49433258	49433258	8553170	6	610,87,88,115,119,1766,	0,701,1343,1509,1909,3290,
#Partially deleted in new
chr19	49446297	49447177	chr19:49446297-49447177	0	-	49446297	49446297	8553170	3	126,144,154,	0,253,726,
#Partially deleted in new
chr19	49446297	49450836	chr19:49446297-49450836	0	-	49447855	49450836	789624	7	126,144,76,130,82,180,55,	0,253,726,1040,1529,3177,4484,
#Partially deleted in new
chr19	49446298	49451810	chr19:49446298-49451810	1	-	49446381	49451574	0	9	125,144,76,130,82,62,180,67,326,	0,252,725,1039,1528,1702,3176,4483,5186,
#Partially deleted in new
chr19	49446298	49448574	chr19:49446298-49448574	0	-	49446298	49446298	8553170	6	125,144,76,83,82,574,	0,252,725,1039,1528,1702,
#Partially deleted in new
chr19	49446298	49448062	chr19:49446298-49448062	0	-	49447079	49448062	789624	5	125,144,76,82,62,	0,252,725,1528,1702,
#Partially deleted in new
chr19	49446298	49449643	chr19:49446298-49449643	0	-	49447343	49449643	789624	7	125,144,76,83,82,62,169,	0,252,725,1039,1528,1702,3176,
#Partially deleted in new
chr19	49446298	49448041	chr19:49446298-49448041	0	-	49446779	49448041	789624	6	125,244,76,130,82,41,	0,252,725,1039,1528,1702,
#Partially deleted in new
chr19	49446298	49448010	chr19:49446298-49448010	0	-	49447343	49448010	789624	6	125,45,76,80,82,10,	0,252,725,1039,1528,1702,
#Partially deleted in new
chr19	49446298	49449520	chr19:49446298-49449520	0	-	49447343	49449520	789624	7	125,144,76,80,82,62,46,	0,252,725,1039,1528,1702,3176,
#Partially deleted in new
chr19	49446298	49449587	chr19:49446298-49449587	0	-	49446381	49449587	789624	7	125,45,76,130,82,62,113,	0,252,725,1039,1528,1702,3176,
#Partially deleted in new
chr19	49446298	49446899	chr19:49446298-49446899	0	-	49446298	49446298	8553170	2	125,349,	0,252,
#Partially deleted in new
chr19	49446298	49447045	chr19:49446298-49447045	0	-	49446298	49446298	8553170	3	125,194,22,	0,252,725,
#Partially deleted in new
chr19	49446368	49453494	chr19:49446368-49453494	3	-	49446381	49451574	0	10	55,144,76,130,82,62,180,67,94,102,	0,182,655,969,1458,1632,3106,4413,5116,7024,
#Partially deleted in new
chr19	49446400	49451601	chr19:49446400-49451601	0	-	49446400	49451424	789624	9	23,144,76,130,82,62,180,67,234,	0,150,623,937,1426,1600,3074,4381,4967,
#Partially deleted in new
chr19	49446741	49451530	chr19:49446741-49451530	0	-	49447855	49451530	789624	7	53,76,130,82,180,67,46,	0,282,596,1085,2733,4040,4743,
#Partially deleted in new
chr19	49447213	49448010	chr19:49447213-49448010	0	-	49447213	49447213	8553170	2	254,184,	0,613,
#Partially deleted in new
chr19	49447286	49451800	chr19:49447286-49451800	0	-	49447286	49447286	8553170	6	134,82,62,180,67,316,	0,540,714,2188,3495,4198,
#Partially deleted in new
chr19	49447374	49453495	chr19:49447374-49453495	0	-	49447374	49451574	789624	7	93,82,62,315,67,94,120,	0,452,626,1965,3407,4110,6001,
#Partially deleted in new
chr19	49447423	49453497	chr19:49447423-49453497	0	-	49447423	49451424	789624	7	44,82,62,180,67,211,228,	0,403,577,2051,3358,3944,5846,
#Partially deleted in new
chr19	49447709	49451817	chr19:49447709-49451817	0	-	49447709	49447709	8553170	5	199,62,180,158,333,	0,291,1765,3072,3775,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	49448991	49451791	chr19:49448991-49451791	0	-	49448991	49448991	8553170	3	663,67,307,	0,1790,2493,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	49449110	49451748	chr19:49449110-49451748	0	-	49449110	49449110	8553170	3	544,158,264,	0,1671,2374,
#Partially deleted in new
chr19	49449565	49453493	chr19:49449565-49453493	0	-	49449565	49451574	789624	4	89,67,107,118,	0,1216,1919,3810,
#Partially deleted in new
chr19	49450890	49451901	chr19:49450890-49451901	0	-	49450890	49451424	789624	2	49,534,	0,477,
#Partially deleted in new
chr19	49453168	49471048	chr19:49453168-49471048	3	+	49453331	49470467	789624	17	253,103,127,179,78,182,153,186,96,137,106,131,168,202,186,123,743,	0,5317,5791,6501,7653,8450,8715,9401,10685,10958,11248,11463,12569,12913,15212,15695,17137,
#Partially deleted in new
chr19	49453224	49470534	chr19:49453224-49470534	1	+	49453411	49470467	789624	14	197,78,182,153,186,96,137,106,131,168,202,186,123,229,	0,7597,8394,8659,9345,10629,10902,11192,11407,12513,12857,15156,15639,17081,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	49453225	49470588	chr19:49453225-49470588	0	+	49453225	49453225	8553170	15	196,103,127,179,78,418,186,96,137,106,131,125,202,186,1725,	0,5260,5734,6444,7596,8393,9344,10628,10901,11191,11406,12555,12856,15155,15638,
#Partially deleted in new
chr19	49453235	49470585	chr19:49453235-49470585	1	+	49453331	49470467	789624	16	186,103,127,179,78,182,186,96,137,106,131,168,202,186,123,280,	0,5250,5724,6434,7586,8383,9334,10618,10891,11181,11396,12502,12846,15145,15628,17070,
#Partially deleted in new
chr19	49453287	49470587	chr19:49453287-49470587	0	+	49453331	49460864	789624	15	134,179,78,182,153,186,96,137,106,131,168,202,186,123,282,	0,6382,7534,8331,8596,9282,10566,10839,11129,11344,12450,12794,15093,15576,17018,
#Partially deleted in new
chr19	49453298	49459730	chr19:49453298-49459730	0	+	49453298	49453298	8553170	3	123,103,61,	0,5187,6371,
#Partially deleted in new
chr19	49462751	49486231	chr19:49462751-49486231	3	+	49462751	49464642	789624	6	4,96,106,131,70,268,	0,1102,1665,1880,11851,23212,
#Partially deleted in new
chr19	49464438	49468945	chr19:49464438-49468945	0	+	49464438	49466224	789624	6	84,131,134,202,186,82,	0,193,1299,1643,3942,4425,
#Partially deleted in new
chr19	49468292	49470589	chr19:49468292-49470589	0	+	49468292	49468292	8553170	3	274,123,284,	0,571,2013,
#Partially deleted in new
chr19	49474206	49486231	chr19:49474206-49486231	0	+	49474639	49476149	789624	9	75,70,111,82,144,85,179,69,217,	0,396,1484,1910,2216,4756,6091,6345,11808,
#Partially deleted in new
chr19	49474227	49486231	chr19:49474227-49486231	1	+	49474639	49480599	789624	9	54,70,111,54,144,85,179,69,268,	0,375,1463,1917,2195,4735,6070,6324,11736,
#Partially deleted in new
chr19	49474233	49486151	chr19:49474233-49486151	3	+	49474639	49480599	0	9	48,70,111,54,144,139,179,69,137,	0,369,1457,1911,2189,4675,6064,6318,11781,
#Partially deleted in new
chr19	49474235	49486231	chr19:49474235-49486231	1	+	49476470	49480599	0	9	46,70,128,54,144,139,179,69,217,	0,367,1438,1909,2187,4673,6062,6316,11779,
#Partially deleted in new
chr19	49474235	49486231	chr19:49474235-49486231	0	+	49474639	49476149	789624	9	46,70,111,82,144,139,179,69,217,	0,367,1455,1881,2187,4673,6062,6316,11779,
#Partially deleted in new
chr19	49474251	49486151	chr19:49474251-49486151	1	+	49474639	49480599	0	9	30,70,111,54,144,139,179,69,188,	0,351,1439,1893,2171,4657,6046,6300,11712,
#Partially deleted in new
chr19	49474560	49486231	chr19:49474560-49486231	1	+	49474639	49480599	0	8	112,111,54,144,139,179,69,268,	0,1130,1584,1862,4348,5737,5991,11403,
#Partially deleted in new
chr19	49474582	49476730	chr19:49474582-49476730	0	+	49474582	49474582	8553170	4	90,111,54,308,	0,1108,1562,1840,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	49474585	49487637	chr19:49474585-49487637	3	+	49474585	49474585	8553170	8	87,128,54,144,139,179,69,621,	0,1088,1559,1837,4323,5712,5966,12431,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	49474601	49482391	chr19:49474601-49482391	1	+	49476470	49480599	0	8	71,128,54,144,139,179,69,517,	0,1072,1543,1821,4307,5696,5950,7273,
#Partially deleted in new
chr19	49475779	49486231	chr19:49475779-49486231	0	+	49475779	49486202	789624	6	22,54,144,85,69,217,	0,365,643,3183,4772,10235,
#Partially deleted in new
chr19	49476108	49486029	chr19:49476108-49486029	0	+	49476108	49476108	8553170	5	90,144,179,69,15,	0,314,4189,4443,9906,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	49478916	49481581	chr19:49478916-49481581	0	+	49478916	49480817	789624	2	131,1030,	0,1635,
#Partially deleted in new
chr19	49487553	49492308	chr19:49487553-49492308	3	+	49487629	49491815	0	8	91,73,66,102,86,60,123,580,	0,2296,2678,2921,3225,3486,3871,4175,
#Partially deleted in new
chr19	49487553	49492301	chr19:49487553-49492301	1	+	49490503	49491815	789624	7	91,63,102,86,60,123,573,	0,2296,2921,3225,3486,3871,4175,
#Partially deleted in new
chr19	49487602	49492308	chr19:49487602-49492308	0	+	49487629	49490477	789624	8	42,63,66,102,86,60,123,580,	0,2247,2629,2872,3176,3437,3822,4126,
#Partially deleted in new
chr19	49487607	49491228	chr19:49487607-49491228	0	+	49487607	49487607	8553170	5	37,73,66,102,450,	0,2242,2624,2867,3171,
#Partially deleted in new
chr19	49487607	49491807	chr19:49487607-49491807	0	+	49487629	49489975	789624	8	37,241,66,102,86,60,123,79,	0,2242,2624,2867,3171,3432,3817,4121,
#Partially deleted in new
chr19	49487607	49492305	chr19:49487607-49492305	0	+	49487607	49487607	8553170	3	37,1698,577,	0,2242,4121,
#Partially deleted in new
chr19	49487614	49491861	chr19:49487614-49491861	0	+	49487614	49487614	8553170	7	30,73,345,86,60,123,133,	0,2235,2617,3164,3425,3810,4114,
#Partially deleted in new
chr19	49487615	49490851	chr19:49487615-49490851	0	+	49487615	49487615	8553170	4	29,448,102,73,	0,2234,2859,3163,
#Partially deleted in new
chr19	49487624	49491889	chr19:49487624-49491889	0	+	49487624	49487624	8553170	8	20,73,171,102,86,60,123,161,	0,2225,2502,2850,3154,3415,3800,4104,
#Partially deleted in new
chr19	49487633	49491843	chr19:49487633-49491843	0	+	49487633	49491815	789624	8	11,73,66,126,86,60,123,115,	0,2216,2598,2841,3145,3406,3791,4095,
#Partially deleted in new
chr19	49489849	49491811	chr19:49489849-49491811	0	+	49489849	49489849	8553170	3	1417,123,83,	0,1575,1879,
#Partially deleted in new
chr19	49489964	49490048	chr19:49489964-49490048	3	+	49489964	49489964	789624	1	84,	0,
#Partially deleted in new
chr19	49490528	49491757	chr19:49490528-49491757	0	+	49490528	49490528	8553170	4	48,321,123,29,	0,250,896,1200,
#Partially deleted in new
chr19	49490614	49490699	chr19:49490614-49490699	3	+	49490614	49490614	789624	1	85,	0,
#Partially deleted in new
chr19	49490644	49491226	chr19:49490644-49491226	0	+	49490644	49490644	8553170	2	220,187,	0,395,
#Partially deleted in new
chr19	49490839	49491814	chr19:49490839-49491814	0	+	49490839	49490839	8553170	3	25,508,86,	0,200,889,
#Partially deleted in new
chr19	49490903	49490974	chr19:49490903-49490974	3	+	49490903	49490903	789624	1	71,	0,
#Partially deleted in new
chr19	49491174	49491260	chr19:49491174-49491260	3	+	49491174	49491174	789624	1	86,	0,
#Partially deleted in new
chr19	49496364	49499689	chr19:49496364-49499689	0	+	49496364	49496364	8553170	4	107,132,527,178,	0,829,1155,3147,
#Partially deleted in new
chr19	49496369	49499689	chr19:49496369-49499689	0	+	49496369	49496369	8553170	3	102,853,178,	0,824,3142,
#Partially deleted in new
chr19	49496373	49499689	chr19:49496373-49499689	3	+	49496456	49499635	0	5	98,132,76,130,178,	0,820,1146,1543,3138,
#Partially deleted in new
chr19	49496430	49499689	chr19:49496430-49499689	0	+	49496430	49496430	8553170	4	41,402,130,178,	0,763,1486,3081,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	49496431	49498251	chr19:49496431-49498251	1	+	49496456	49498050	789624	4	40,132,76,335,	0,762,1088,1485,
#Partially deleted in new
chr19	49496433	49499689	chr19:49496433-49499689	1	+	49497930	49499635	789624	5	38,153,76,130,178,	0,739,1086,1483,3078,
#Deleted in new
chr19	49496435	49498080	chr19:49496435-49498080	0	+	49496435	49496435	8553170	3	36,402,164,	0,758,1481,
#Partially deleted in new
chr19	49496453	49499689	chr19:49496453-49499689	1	+	49496456	49499529	789624	5	18,89,15,130,178,	0,740,1127,1463,3058,
#Partially deleted in new
chr19	49496465	49499688	chr19:49496465-49499688	0	+	49496465	49497925	789624	5	32,132,76,130,177,	0,728,1054,1451,3046,
#Deleted in new
chr19	49497719	49497806	chr19:49497719-49497806	3	+	49497719	49497719	789624	1	87,	0,
#Deleted in new
chr19	49500784	49500868	chr19:49500784-49500868	3	-	49500784	49500784	5263520	1	84,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	49502431	49502639	chr19:49502431-49502639	7	-	49502431	49502431	16724991	1	208,	0,
#Partially deleted in new
chr19	49506815	49524780	chr19:49506815-49524780	0	+	49506815	49506815	8553170	2	109,274,	0,17691,
#Partially deleted in new
chr19	49512278	49526333	chr19:49512278-49526333	3	+	49513400	49526119	0	7	472,87,252,276,270,117,324,	0,1108,1603,1932,12228,13178,13731,
#Deleted in new
chr19	49512374	49514309	chr19:49512374-49514309	0	+	49513400	49514309	789624	4	140,87,252,99,	0,1012,1507,1836,
#Deleted in new
chr19	49512634	49514421	chr19:49512634-49514421	0	+	49514305	49514421	789624	3	116,252,211,	0,1247,1576,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	49512661	49526297	chr19:49512661-49526297	0	+	49513400	49515253	789624	9	89,87,252,276,93,119,270,105,325,	0,725,1220,1549,2515,9033,11845,12795,13311,
#Partially deleted in new
chr19	49513153	49526333	chr19:49513153-49526333	1	+	49513400	49526119	0	6	320,252,276,270,117,324,	0,728,1057,11353,12303,12856,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	49513176	49521813	chr19:49513176-49521813	0	+	49513176	49513176	8553170	4	67,252,276,119,	0,705,1034,8518,
#Deleted in new
chr19	49513178	49514388	chr19:49513178-49514388	0	+	49513400	49514388	789624	4	65,87,252,178,	0,208,703,1032,
#Partially deleted in new
chr19	49513194	49526331	chr19:49513194-49526331	0	+	49513194	49513194	8553170	3	1292,1067,322,	0,11312,12815,
#Partially deleted in new
chr19	49513196	49524664	chr19:49513196-49524664	0	+	49513196	49513196	8553170	5	47,252,276,86,158,	0,685,1014,2917,11310,
#Partially deleted in new
chr19	49513254	49526333	chr19:49513254-49526333	1	+	49513400	49526119	789624	3	219,117,324,	0,12202,12755,
#Partially deleted in new
chr19	49513378	49526329	chr19:49513378-49526329	1	+	49513400	49526119	789624	5	95,252,270,117,320,	0,503,11128,12078,12631,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	49513389	49524568	chr19:49513389-49524568	0	+	49513389	49513389	8553170	4	84,605,119,62,	0,492,8305,11117,
#Partially deleted in new
chr19	49513394	49525164	chr19:49513394-49525164	0	+	49513394	49513394	8553170	5	79,252,276,86,658,	0,487,816,2719,11112,
#Partially deleted in new
chr19	49513397	49525012	chr19:49513397-49525012	0	+	49513397	49513397	8553170	2	76,506,	0,11109,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	49513403	49525263	chr19:49513403-49525263	0	+	49513403	49520706	789624	5	70,252,276,533,757,	0,478,807,7265,11103,
#Partially deleted in new
chr19	49513917	49524644	chr19:49513917-49524644	0	+	49513917	49524644	789624	3	216,276,74,	0,293,10653,
#Partially deleted in new
chr19	49514057	49526333	chr19:49514057-49526333	0	+	49514057	49526119	789624	3	76,276,324,	0,153,11952,
#Partially deleted in new
chr19	49527617	49543638	chr19:49527617-49543638	3	+	49528472	49543213	789624	7	441,248,203,173,61,200,533,	0,849,6575,9415,11501,14935,15488,
#Partially deleted in new
chr19	49528289	49537132	chr19:49528289-49537132	0	+	49528472	49537132	789624	4	92,248,109,100,	0,177,5903,8743,
#Partially deleted in new
chr19	49528543	49537084	chr19:49528543-49537084	0	+	49528543	49528543	8553170	2	171,52,	0,8489,
#Partially deleted in new
chr19	49528625	49546962	chr19:49528625-49546962	0	+	49528625	49546865	789624	4	89,203,173,142,	0,5567,8407,18195,
#Partially deleted in new
chr19	49542601	49543633	chr19:49542601-49543633	0	+	49542601	49543213	789624	2	67,528,	0,504,
#Partially deleted in new
chr19	49555710	49580558	chr19:49555710-49580558	1	-	49555750	49560691	789624	9	112,109,188,119,169,82,106,71,44,	0,606,838,1164,1370,3186,4223,4911,24804,
#Partially deleted in new
chr19	49555710	49580572	chr19:49555710-49580572	3	-	49555750	49560691	789624	9	112,109,188,119,160,82,106,71,58,	0,606,838,1164,1379,3186,4223,4911,24804,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	49555710	49580535	chr19:49555710-49580535	0	-	49555710	49555710	8553170	8	112,109,188,119,1889,106,71,21,	0,606,838,1164,1379,4223,4911,24804,
#Partially deleted in new
chr19	49555710	49560630	chr19:49555710-49560630	0	-	49555710	49560630	789624	7	112,109,119,160,82,106,9,	0,606,1164,1379,3186,4223,4911,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	49555712	49580555	chr19:49555712-49580555	0	-	49555712	49555712	8553170	7	110,677,1110,82,106,71,41,	0,604,1377,3184,4221,4909,24802,
#Deleted in new
chr19	49555717	49557295	chr19:49555717-49557295	0	-	49555717	49555717	8553170	4	105,109,445,206,	0,599,831,1372,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	49556387	49560049	chr19:49556387-49560049	0	-	49556387	49556387	8553170	7	38,109,119,169,138,82,116,	0,161,487,693,1674,2509,3546,
#Partially deleted in new
chr19	49556548	49590262	chr19:49556548-49590262	0	-	49556548	49560691	789624	7	188,119,160,82,106,71,107,	0,326,541,2348,3385,4073,33607,
#Partially deleted in new
chr19	49556582	49560691	chr19:49556582-49560691	0	-	49556582	49560691	789624	6	75,36,160,82,106,70,	0,375,507,2314,3351,4039,
#Partially deleted in new
chr19	49556602	49580532	chr19:49556602-49580532	0	-	49558957	49560691	789624	7	51,119,160,77,106,71,18,	0,272,487,2294,3331,4019,23912,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	49556978	49580556	chr19:49556978-49580556	0	-	49558957	49560691	789624	6	15,856,77,106,71,42,	0,111,1918,2955,3643,23536,
#Partially deleted in new
chr19	49557217	49579278	chr19:49557217-49579278	0	-	49557217	49560691	789624	5	32,82,106,71,138,	0,1679,2716,3404,21923,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	49557272	49560050	chr19:49557272-49560050	0	-	49557272	49557272	8553170	3	673,82,117,	0,1624,2661,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	49557876	49560397	chr19:49557876-49560397	0	-	49557876	49557876	8553170	4	69,138,82,464,	0,185,1020,2057,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	49558432	49560037	chr19:49558432-49560037	0	-	49558432	49558432	8553170	2	546,125,	0,1480,
#Duplicated in new
chr19	49559210	49580547	chr19:49559210-49580547	0	-	49559210	49559210	8553170	3	829,71,33,	0,1411,21304,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	49566671	49566772	chr19:49566671-49566772	3	+	49566671	49566671	8553170	1	101,	0,
#Partially deleted in new
chr19	49580645	49583947	chr19:49580645-49583947	0	+	49583219	49583947	789624	5	60,66,98,176,35,	0,770,2561,2896,3267,
#Partially deleted in new
chr19	49581325	49591015	chr19:49581325-49591015	3	+	49583219	49590389	789624	7	156,98,176,40,136,153,645,	0,1881,2216,2587,7171,8574,9045,
#Partially deleted in new
chr19	49581346	49590525	chr19:49581346-49590525	0	+	49581346	49581346	8553170	3	135,153,155,	0,8553,9024,
#Partially deleted in new
chr19	49581347	49591004	chr19:49581347-49591004	0	+	49583219	49583580	789624	7	134,98,343,40,136,153,634,	0,1859,2027,2565,7149,8552,9023,
#Partially deleted in new
chr19	49581372	49591004	chr19:49581372-49591004	0	+	49581372	49581372	8553170	6	109,511,40,136,153,634,	0,1834,2540,7124,8527,8998,
#Partially deleted in new
chr19	49591642	49626439	chr19:49591642-49626439	3	+	49591654	49625607	789624	14	98,113,162,3317,667,428,117,134,473,126,98,147,96,979,	0,1684,2811,3054,7629,9848,22890,23233,24104,28709,29882,33201,33462,33818,
#Partially deleted in new
chr19	49595521	49626438	chr19:49595521-49626438	1	+	49595521	49625607	789624	12	51,1164,667,428,117,134,473,126,98,147,96,978,	0,1328,3750,5969,19011,19354,20225,24830,26003,29322,29583,29939,
#Deleted in new
chr19	49620448	49621760	chr19:49620448-49621760	0	+	49620448	49620448	8553170	2	29,236,	0,1076,
#Deleted in new
chr19	49625993	49626439	chr19:49625993-49626439	3	-	49625993	49625993	8553170	2	245,115,	0,331,
#Partially deleted in new
chr19	49635291	49640201	chr19:49635291-49640201	3	-	49635575	49640098	0	6	369,119,109,103,88,256,	0,442,1327,1532,1751,4654,
#Partially deleted in new
chr19	49635811	49640122	chr19:49635811-49640122	0	-	49635811	49635811	8553170	4	41,109,307,177,	0,807,1012,4134,
#Partially deleted in new
chr19	49642124	49658642	chr19:49642124-49658642	3	+	49645026	49658399	789624	11	118,114,58,95,101,116,2838,83,219,129,435,	0,2896,3229,3983,4401,4590,8743,12224,12527,15636,16083,
#Partially deleted in new
chr19	49642659	49650998	chr19:49642659-49650998	0	+	49645026	49650998	789624	7	47,114,58,95,101,116,131,	0,2361,2694,3448,3866,4055,8208,
#Deleted in new
chr19	49644829	49646558	chr19:49644829-49646558	0	+	49645026	49646558	789624	4	305,58,95,33,	0,524,1278,1696,
#Deleted in new
chr19	49644922	49646619	chr19:49644922-49646619	0	+	49645026	49646619	789624	4	212,58,99,94,	0,431,1185,1603,
#Partially deleted in new
chr19	49659568	49661524	chr19:49659568-49661524	0	-	49659568	49659568	8553170	3	265,132,75,	0,1144,1881,
#Partially deleted in new
chr19	49659569	49665875	chr19:49659569-49665875	3	-	49659647	49662587	789624	7	264,116,381,193,71,172,245,	0,1143,2378,2855,3618,3773,6061,
#Partially deleted in new
chr19	49659571	49665169	chr19:49659571-49665169	1	-	49659647	49664838	0	7	262,116,381,193,71,172,496,	0,1141,2376,2853,3616,3771,5102,
#Partially deleted in new
chr19	49659571	49665875	chr19:49659571-49665875	1	-	49659647	49664838	0	8	262,116,381,193,71,172,173,245,	0,1141,2376,2853,3616,3771,5102,6059,
#Partially deleted in new
chr19	49659571	49665755	chr19:49659571-49665755	1	-	49659588	49662587	789624	5	262,193,71,172,125,	0,2853,3616,3771,6059,
#Partially deleted in new
chr19	49659571	49665231	chr19:49659571-49665231	1	-	49659588	49664838	789624	6	262,381,193,71,172,558,	0,2376,2853,3616,3771,5102,
#Partially deleted in new
chr19	49659571	49665802	chr19:49659571-49665802	1	-	49659588	49664838	0	8	262,132,381,193,71,172,173,172,	0,1141,2376,2853,3616,3771,5102,6059,
#Partially deleted in new
chr19	49659572	49665857	chr19:49659572-49665857	1	-	49659647	49664838	0	8	261,116,381,193,71,172,173,374,	0,1140,2375,2852,3615,3770,5101,5911,
#Partially deleted in new
chr19	49659574	49661003	chr19:49659574-49661003	0	-	49659574	49659574	8553170	2	259,291,	0,1138,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	49659574	49665857	chr19:49659574-49665857	0	-	49661939	49664838	789624	7	259,116,879,193,71,172,1184,	0,1138,1875,2850,3613,3768,5099,
#Partially deleted in new
chr19	49659578	49665705	chr19:49659578-49665705	1	-	49659647	49662587	789624	8	255,116,381,193,71,172,231,75,	0,1134,2369,2846,3609,3764,4864,6052,
#Partially deleted in new
chr19	49659578	49665705	chr19:49659578-49665705	1	-	49659647	49662587	0	5	255,116,193,71,75,	0,1134,2846,3609,6052,
#Partially deleted in new
chr19	49659578	49665731	chr19:49659578-49665731	1	-	49659647	49662587	789624	6	255,116,381,193,71,101,	0,1134,2369,2846,3609,6052,
#Partially deleted in new
chr19	49659578	49665705	chr19:49659578-49665705	1	-	49659647	49664838	0	7	255,116,193,71,172,173,75,	0,1134,2846,3609,3764,5095,6052,
#Partially deleted in new
chr19	49659578	49665705	chr19:49659578-49665705	1	-	49659647	49662587	0	6	255,116,193,71,172,75,	0,1134,2846,3609,3764,6052,
#Partially deleted in new
chr19	49659631	49665842	chr19:49659631-49665842	1	-	49659647	49662587	789624	8	202,116,381,193,71,172,121,212,	0,1081,2316,2793,3556,3711,4921,5999,
#Partially deleted in new
chr19	49659757	49665613	chr19:49659757-49665613	0	-	49659757	49664838	789624	7	76,116,193,71,172,173,130,	0,955,2667,3430,3585,4916,5726,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	49661594	49662329	chr19:49661594-49662329	0	-	49661594	49661594	8553170	2	31,382,	0,353,
#Partially deleted in new
chr19	49662068	49665779	chr19:49662068-49665779	0	-	49662068	49664838	789624	6	260,193,71,172,277,145,	0,356,1119,1274,2605,3566,
#Partially deleted in new
chr19	49662132	49665788	chr19:49662132-49665788	0	-	49662132	49662587	789624	5	196,193,71,121,158,	0,292,1055,2420,3498,
#Partially deleted in new
chr19	49662174	49665847	chr19:49662174-49665847	0	-	49662174	49662587	789624	6	154,193,71,172,121,213,	0,250,1013,1168,2378,3460,
#Partially deleted in new
chr19	49662238	49665784	chr19:49662238-49665784	0	-	49662238	49662587	789624	5	90,193,71,172,154,	0,186,949,1104,3392,
#Partially deleted in new
chr19	49662300	49665835	chr19:49662300-49665835	0	-	49662300	49664838	789624	6	28,25,71,172,173,164,	0,292,887,1042,2373,3371,
#Partially deleted in new
chr19	49662374	49664523	chr19:49662374-49664523	0	-	49662374	49662374	8553170	4	243,71,172,81,	0,813,968,2068,
#Partially deleted in new
chr19	49662426	49665780	chr19:49662426-49665780	0	-	49662426	49662426	8553170	4	191,327,173,109,	0,761,2247,3245,
#Partially deleted in new
chr19	49662453	49665859	chr19:49662453-49665859	0	-	49662453	49664838	789624	5	164,71,172,173,188,	0,734,889,2220,3218,
#Partially deleted in new
chr19	49662538	49664838	chr19:49662538-49664838	1	-	49662538	49664838	0	3	79,71,165,	0,649,2135,
#Partially deleted in new
chr19	49662584	49664723	chr19:49662584-49664723	0	-	49663470	49664723	789624	4	33,71,172,171,	0,603,758,1968,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	49663235	49663869	chr19:49663235-49663869	0	-	49663235	49663235	8553170	2	23,527,	0,107,
#Partially deleted in new
chr19	49663372	49665843	chr19:49663372-49665843	0	-	49663372	49664838	789624	3	142,173,385,	0,1301,2086,
#Partially deleted in new
chr19	49663420	49665754	chr19:49663420-49665754	0	-	49663420	49663420	8553170	3	94,87,120,	0,1166,2214,
#Partially deleted in new
chr19	49665141	49673915	chr19:49665141-49673915	1	+	49665823	49673731	789624	3	926,115,218,	0,1543,8556,
#Partially deleted in new
chr19	49665141	49673915	chr19:49665141-49673915	1	+	49665823	49673777	789624	4	926,115,143,218,	0,1543,1877,8556,
#Partially deleted in new
chr19	49665141	49673915	chr19:49665141-49673915	3	+	49665823	49673748	789624	7	926,115,143,87,92,273,218,	0,1543,1877,3709,3882,5074,8556,
#Partially deleted in new
chr19	49665141	49673915	chr19:49665141-49673915	1	+	49665823	49673777	789624	6	926,115,143,87,141,218,	0,1543,1877,3709,3882,8556,
#Partially deleted in new
chr19	49665565	49673916	chr19:49665565-49673916	1	+	49665823	49673748	789624	7	502,115,143,87,92,273,219,	0,1119,1453,3285,3458,4650,8132,
#Partially deleted in new
chr19	49665565	49673859	chr19:49665565-49673859	1	+	49665823	49673748	789624	7	502,115,140,87,92,273,162,	0,1119,1456,3285,3458,4650,8132,
#Partially deleted in new
chr19	49665960	49673916	chr19:49665960-49673916	1	+	49666692	49669108	789624	5	107,115,87,92,219,	0,724,2890,3063,7737,
#Partially deleted in new
chr19	49665960	49673916	chr19:49665960-49673916	0	+	49666692	49669108	789624	6	107,115,87,92,273,219,	0,724,2890,3063,4255,7737,
#Deleted in new
chr19	49665997	49667030	chr19:49665997-49667030	0	+	49665997	49665997	8553170	2	70,346,	0,687,
#Partially deleted in new
chr19	49665998	49673916	chr19:49665998-49673916	1	+	49666692	49673777	789624	5	69,115,143,87,219,	0,686,1020,2852,7699,
#Partially deleted in new
chr19	49666006	49673916	chr19:49666006-49673916	1	+	49666692	49673748	789624	7	61,115,143,87,92,273,219,	0,678,1012,2844,3017,4209,7691,
#Partially deleted in new
chr19	49666012	49673916	chr19:49666012-49673916	1	+	49666692	49673748	789624	5	55,115,69,52,219,	0,672,1006,4424,7685,
#Partially deleted in new
chr19	49672108	49673915	chr19:49672108-49673915	0	+	49672108	49672108	8553170	2	93,218,	0,1589,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	49675785	49684816	chr19:49675785-49684816	0	+	49680534	49684816	789624	6	654,102,156,64,143,63,	0,4701,6124,6410,8141,8968,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	49675896	49688447	chr19:49675896-49688447	1	+	49680534	49688245	789624	11	364,94,102,156,64,143,88,116,151,122,286,	0,449,4590,6013,6299,8030,8857,9025,10196,10708,12265,
#Partially deleted in new
chr19	49676225	49685032	chr19:49676225-49685032	0	+	49680534	49685032	789624	7	35,102,156,64,143,88,111,	0,4261,5684,5970,7701,8528,8696,
#Partially deleted in new
chr19	49676240	49681979	chr19:49676240-49681979	0	+	49680235	49681979	789624	5	199,58,114,102,70,	0,3631,3899,4246,5669,
#Partially deleted in new
chr19	49677072	49685037	chr19:49677072-49685037	0	+	49680534	49685037	789624	7	110,102,156,64,143,88,116,	0,3414,4837,5123,6854,7681,7849,
#Partially deleted in new
chr19	49677151	49688447	chr19:49677151-49688447	3	+	49677280	49688245	789624	10	165,102,156,64,143,88,116,151,122,286,	0,3335,4758,5044,6775,7602,7770,8941,9453,11010,
#Partially deleted in new
chr19	49677151	49688450	chr19:49677151-49688450	1	+	49677280	49688245	789624	8	165,102,156,64,143,151,122,289,	0,3335,4758,5044,6775,8941,9453,11010,
#Partially deleted in new
chr19	49677172	49684069	chr19:49677172-49684069	0	+	49677280	49680210	789624	7	144,58,99,102,156,64,143,	0,2699,2967,3314,4737,5023,6754,
#Partially deleted in new
chr19	49677248	49685215	chr19:49677248-49685215	0	+	49677248	49677248	8553170	7	68,102,156,64,143,88,294,	0,3238,4661,4947,6678,7505,7673,
#Partially deleted in new
chr19	49677266	49680119	chr19:49677266-49680119	0	+	49677266	49677266	8553170	2	50,248,	0,2605,
#Partially deleted in new
chr19	49677271	49688447	chr19:49677271-49688447	1	+	49677280	49688245	789624	11	45,54,102,156,64,143,88,116,151,122,286,	0,2600,3215,4638,4924,6655,7482,7650,8821,9333,10890,
#Partially deleted in new
chr19	49677276	49685028	chr19:49677276-49685028	0	+	49677276	49677276	8553170	6	40,102,156,64,143,275,	0,3210,4633,4919,6650,7477,
#Partially deleted in new
chr19	49677293	49684962	chr19:49677293-49684962	0	+	49677293	49684962	789624	8	65,54,102,156,64,143,88,41,	0,2578,3193,4616,4902,6633,7460,7628,
#Partially deleted in new
chr19	49677501	49682249	chr19:49677501-49682249	0	+	49680235	49682249	789624	6	96,58,114,102,156,54,	0,2370,2638,2985,4408,4694,
#Partially deleted in new
chr19	49678224	49684818	chr19:49678224-49684818	0	+	49680534	49684818	789624	6	48,102,156,64,143,65,	0,2262,3685,3971,5702,6529,
#Partially deleted in new
chr19	49679774	49682249	chr19:49679774-49682249	0	+	49679774	49679774	8553170	4	151,102,156,54,	0,712,2135,2421,
#Deleted in new
chr19	49682116	49682195	chr19:49682116-49682195	3	+	49682116	49682116	5263520	1	79,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	49683634	49684797	chr19:49683634-49684797	0	+	49683634	49683634	8553170	2	435,44,	0,1119,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	49684826	49685555	chr19:49684826-49685555	0	+	49684826	49684826	8553170	3	15,116,394,	0,95,335,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	49685304	49688419	chr19:49685304-49688419	0	+	49685304	49685304	8553170	4	335,151,122,258,	0,788,1300,2857,
#Partially deleted in new
chr19	49685723	49686726	chr19:49685723-49686726	0	+	49685723	49685723	8553170	2	520,122,	0,881,
#Deleted in new
chr19	49687852	49689029	chr19:49687852-49689029	0	+	49687852	49687852	8553170	2	100,868,	0,309,
#Deleted in new
chr19	49688663	49690575	chr19:49688663-49690575	3	+	49689837	49690493	789624	2	1248,470,	0,1442,
#Deleted in new
chr19	49688852	49690573	chr19:49688852-49690573	3	-	49688852	49688852	8553170	2	171,256,	0,1465,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	49690897	49697383	chr19:49690897-49697383	0	+	49692252	49696547	789624	5	100,69,155,121,58,	0,923,1341,5584,6428,
#Partially deleted in new
chr19	49691109	49713731	chr19:49691109-49713731	3	+	49692252	49713605	0	19	231,155,140,172,102,138,78,108,85,196,183,106,117,165,135,153,114,93,312,	0,1129,6216,9574,10207,10387,13600,13897,14104,14799,15121,16408,17613,19210,19613,20699,21626,21862,22310,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr19	49691111	49713043	chr19:49691111-49713043	0	+	49692252	49696547	789624	20	229,110,155,121,140,172,102,138,78,108,85,196,183,106,117,165,135,153,114,72,	0,549,1127,5370,6214,9572,10205,10385,13598,13895,14102,14797,15119,16406,17611,19208,19611,20697,21624,21860,
#Partially deleted in new
chr19	49691115	49713731	chr19:49691115-49713731	1	+	49692252	49713605	0	20	225,133,155,140,172,102,138,78,108,85,196,183,106,117,165,135,153,114,93,312,	0,705,1123,6210,9568,10201,10381,13594,13891,14098,14793,15115,16402,17607,19204,19607,20693,21620,21856,22304,
#Partially deleted in new
chr19	49691115	49711065	chr19:49691115-49711065	0	+	49691115	49691115	8553170	14	225,69,155,140,172,138,78,108,85,196,183,106,117,746,	0,705,1123,6210,9568,10381,13594,13891,14098,14793,15115,16402,17607,19204,
#Partially deleted in new
chr19	49691135	49713672	chr19:49691135-49713672	1	+	49692252	49713605	0	20	205,69,155,140,172,102,138,78,108,85,196,183,106,117,165,135,153,114,93,253,	0,685,1103,6190,9548,10181,10361,13574,13871,14078,14773,15095,16382,17587,19184,19587,20673,21600,21836,22284,
#Partially deleted in new
chr19	49691135	49704787	chr19:49691135-49704787	0	+	49692252	49704787	789624	8	205,69,155,140,172,102,138,78,	0,685,1103,6190,9548,10181,10361,13574,
#Partially deleted in new
chr19	49691143	49713731	chr19:49691143-49713731	1	+	49692252	49713605	0	20	197,69,155,140,172,102,138,78,75,85,196,183,106,117,165,135,153,114,93,312,	0,677,1095,6182,9540,10173,10353,13566,13896,14070,14765,15087,16374,17579,19176,19579,20665,21592,21828,22276,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	49691147	49700694	chr19:49691147-49700694	0	+	49692252	49696547	789624	5	193,155,121,140,11,	0,1091,5334,6178,9536,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	49691147	49697935	chr19:49691147-49697935	0	+	49691147	49691147	8553170	4	193,69,155,610,	0,673,1091,6178,
#Partially deleted in new
chr19	49691152	49700689	chr19:49691152-49700689	0	+	49692252	49700689	789624	5	188,110,155,140,6,	0,508,1086,6173,9531,
#Partially deleted in new
chr19	49691563	49701396	chr19:49691563-49701396	0	+	49692252	49701396	789624	5	207,155,140,172,80,	0,675,5762,9120,9753,
#Partially deleted in new
chr19	49691588	49701503	chr19:49691588-49701503	0	+	49692252	49701503	789624	5	182,155,140,102,7,	0,650,5737,9728,9908,
#Partially deleted in new
chr19	49691591	49705964	chr19:49691591-49705964	0	+	49692252	49697462	789624	9	27,155,81,102,138,78,108,85,56,	0,647,5793,9725,9905,13118,13415,13622,14317,
#Partially deleted in new
chr19	49691637	49710631	chr19:49691637-49710631	0	+	49691637	49691637	8553170	12	133,155,140,102,138,78,292,196,183,106,117,312,	0,601,5688,9679,9859,13072,13369,14271,14593,15880,17085,18682,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	49701581	49712343	chr19:49701581-49712343	0	+	49701581	49701581	8553170	9	53,78,108,85,196,183,106,117,2024,	0,3128,3425,3632,4327,4649,5936,7141,8738,
#Partially deleted in new
chr19	49704686	49706073	chr19:49704686-49706073	0	+	49704686	49704686	8553170	3	101,292,165,	0,320,1222,
#Partially deleted in new
chr19	49706078	49713731	chr19:49706078-49713731	0	+	49706078	49713605	789624	8	26,183,106,117,165,135,93,312,	0,152,1439,2644,4241,4644,6893,7341,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	49711563	49713626	chr19:49711563-49713626	0	+	49711563	49711563	8553170	4	398,114,93,207,	0,1172,1408,1856,
#Deleted in new
chr19	49712554	49713731	chr19:49712554-49713731	0	+	49712554	49712554	8553170	3	295,93,312,	0,417,865,
#Deleted in new
chr19	49712627	49713731	chr19:49712627-49713731	0	+	49712627	49712627	8553170	3	222,93,366,	0,344,738,
#Deleted in new
chr19	49712718	49713724	chr19:49712718-49713724	0	+	49712718	49712718	8553170	2	346,305,	0,701,
#Deleted in new
chr19	49712992	49713731	chr19:49712992-49713731	0	+	49712992	49713667	789624	3	72,122,116,	0,427,623,
#Partially deleted in new
chr19	49719497	49720081	chr19:49719497-49720081	7	-	49719497	49719497	16724991	1	584,	0,
#Deleted in new
chr19	49739752	49740331	chr19:49739752-49740331	0	-	49739752	49739752	8553170	1	579,	0,
#Partially deleted in new
chr19	49739754	49763330	chr19:49739754-49763330	3	-	49739775	49763247	789624	11	178,125,136,174,195,329,84,84,96,229,253,	0,304,2130,4476,5447,6715,7634,8330,8619,22249,23323,
#Partially deleted in new
chr19	49739756	49747378	chr19:49739756-49747378	1	-	49739775	49747209	789624	7	176,125,136,174,195,329,232,	0,302,2128,4474,5445,6713,7390,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	49764523	49764630	chr19:49764523-49764630	3	-	49764523	49764523	8553170	1	107,	0,
#Partially deleted in new
chr19	49766967	49807112	chr19:49766967-49807112	1	+	49767133	49806758	789624	23	233,69,143,194,130,102,109,151,169,138,183,98,232,168,161,57,83,90,124,117,70,135,432,	0,14789,14979,15563,24967,26023,28662,31834,32359,32661,33000,33993,34422,34754,35013,35981,36139,36319,38485,38693,38904,39151,39713,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	49767006	49797562	chr19:49767006-49797562	0	+	49767006	49767006	8553170	8	194,69,143,194,130,102,89,1460,	0,14750,14940,15524,24928,25984,28623,29096,
#Partially deleted in new
chr19	49767133	49807110	chr19:49767133-49807110	3	+	49767133	49806758	789624	24	67,69,143,194,130,102,109,151,169,138,183,98,232,168,161,66,57,83,90,124,117,70,135,430,	0,14623,14813,15397,24801,25857,28496,31668,32193,32495,32834,33827,34256,34588,34847,35400,35815,35973,36153,38319,38527,38738,38985,39547,
#Partially deleted in new
chr19	49767135	49806791	chr19:49767135-49806791	0	+	49767135	49793049	789624	22	65,69,24,57,109,151,169,138,50,54,39,219,168,161,57,83,90,124,53,70,135,111,	0,14621,14811,25900,28494,31666,32191,32493,32832,32961,33825,34267,34586,34845,35813,35971,36151,38317,38589,38736,38983,39545,
#Deleted in new
chr19	49791865	49791934	chr19:49791865-49791934	3	+	49791865	49791865	5263520	1	69,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	49800691	49801733	chr19:49800691-49801733	0	+	49800691	49800691	8553170	3	367,232,12,	0,698,1030,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	49801546	49804540	chr19:49801546-49804540	0	+	49801546	49801546	8553170	2	343,2560,	0,434,
#Partially deleted in new
chr19	49802521	49805933	chr19:49802521-49805933	0	+	49802521	49802521	8553170	7	78,57,83,90,124,117,62,	0,427,585,765,2931,3139,3350,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	49804875	49807113	chr19:49804875-49807113	0	+	49804875	49804875	8553170	1	2238,	0,
#Partially deleted in new
chr19	49806868	49813190	chr19:49806868-49813190	0	-	49811671	49813106	789624	10	506,75,65,107,96,198,105,69,122,195,	0,1545,1705,1848,2294,2509,4494,4762,5746,6127,
#Partially deleted in new
chr19	49806884	49808639	chr19:49806884-49808639	0	-	49808133	49808639	789624	4	490,45,78,66,	0,1230,1529,1689,
#Partially deleted in new
chr19	49806889	49813175	chr19:49806889-49813175	1	-	49807150	49813106	789624	10	485,75,65,107,96,198,105,69,99,180,	0,1524,1684,1827,2273,2488,4473,4741,5748,6106,
#Partially deleted in new
chr19	49806889	49813249	chr19:49806889-49813249	1	-	49807150	49812697	789624	11	485,75,65,107,96,198,105,69,85,122,117,	0,1524,1684,1827,2273,2488,4473,4741,5361,5725,6243,
#Partially deleted in new
chr19	49806892	49813156	chr19:49806892-49813156	0	-	49811671	49813106	789624	10	482,78,65,107,96,198,105,69,122,161,	0,1521,1681,1824,2270,2485,4470,4738,5722,6103,
#Partially deleted in new
chr19	49806896	49813270	chr19:49806896-49813270	3	-	49807150	49813106	789624	11	478,75,65,107,96,198,105,69,85,122,275,	0,1517,1677,1820,2266,2481,4466,4734,5354,5718,6099,
#Partially deleted in new
chr19	49806919	49813273	chr19:49806919-49813273	0	-	49812308	49813106	789624	11	455,75,65,107,96,198,105,69,85,99,278,	0,1494,1654,1797,2243,2458,4443,4711,5331,5718,6076,
#Deleted in new
chr19	49808122	49808825	chr19:49808122-49808825	0	-	49808122	49808122	8553170	3	366,65,109,	0,451,594,
#Deleted in new
chr19	49808618	49809865	chr19:49808618-49809865	0	-	49808618	49808618	8553170	5	20,107,96,198,152,	0,98,544,759,1095,
#Deleted in new
chr19	49808932	49809738	chr19:49808932-49809738	3	+	49808932	49808932	8553170	2	94,426,	0,380,
#Partially deleted in new
chr19	49809394	49813249	chr19:49809394-49813249	0	-	49811467	49812697	789624	6	181,129,69,85,122,117,	0,1968,2236,2856,3220,3738,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	49811035	49813309	chr19:49811035-49813309	0	-	49811035	49811035	8553170	5	432,69,85,122,314,	0,595,1215,1579,1960,
#Partially deleted in new
chr19	49811362	49813286	chr19:49811362-49813286	0	-	49812308	49813106	789624	4	105,69,85,291,	0,268,888,1633,
#Partially deleted in new
chr19	49811364	49813241	chr19:49811364-49813241	0	-	49811364	49811364	8553170	5	127,69,85,122,246,	0,266,886,1250,1631,
#Partially deleted in new
chr19	49811380	49817376	chr19:49811380-49817376	0	-	49811380	49812268	789624	6	87,69,85,99,206,26,	0,250,870,1257,2226,5970,
#Partially deleted in new
chr19	49811383	49813178	chr19:49811383-49813178	1	-	49811671	49813106	789624	4	108,69,122,183,	0,247,1231,1612,
#Partially deleted in new
chr19	49811430	49813235	chr19:49811430-49813235	0	-	49812559	49812697	789624	5	37,69,85,290,103,	0,200,820,1016,1702,
#Deleted in new
chr19	49812250	49813299	chr19:49812250-49813299	0	-	49812559	49813106	789624	3	85,290,304,	0,196,745,
#Deleted in new
chr19	49812279	49813284	chr19:49812279-49813284	0	-	49812559	49813106	789624	3	56,239,289,	0,167,716,
#Partially deleted in new
chr19	49818278	49836980	chr19:49818278-49836980	1	+	49818341	49836944	789624	7	197,46,125,99,46,154,134,	0,292,893,10170,10691,17974,18568,
#Partially deleted in new
chr19	49818278	49836980	chr19:49818278-49836980	1	+	49818341	49836944	789624	12	197,23,149,129,86,58,108,192,72,219,181,134,	0,292,12460,13054,13657,13821,14029,16707,17255,17448,17947,18568,
#Partially deleted in new
chr19	49818278	49836980	chr19:49818278-49836980	1	+	49818341	49836944	789624	11	197,46,125,99,121,163,131,88,65,124,134,	0,292,893,10170,10691,11507,11809,12232,12415,18004,18568,
#Partially deleted in new
chr19	49818278	49836980	chr19:49818278-49836980	1	+	49818341	49836944	789624	5	197,11,119,181,134,	0,292,17548,17947,18568,
#Partially deleted in new
chr19	49818281	49818882	chr19:49818281-49818882	0	+	49818281	49818281	8553170	2	194,312,	0,289,
#Partially deleted in new
chr19	49818288	49836979	chr19:49818288-49836979	3	+	49818341	49836944	0	18	187,46,125,99,121,163,131,88,194,129,86,58,108,192,72,219,181,133,	0,282,883,10160,10681,11497,11799,12222,12405,13044,13647,13811,14019,16697,17245,17438,17937,18558,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	49818288	49819950	chr19:49818288-49819950	0	+	49818288	49818288	8553170	3	187,46,779,	0,282,883,
#Partially deleted in new
chr19	49818341	49836962	chr19:49818341-49836962	1	+	49818341	49836944	0	13	134,46,88,194,129,86,58,108,192,72,219,181,116,	0,229,12169,12352,12991,13594,13758,13966,16644,17192,17385,17884,18505,
#Partially deleted in new
chr19	49818341	49836962	chr19:49818341-49836962	0	+	49818341	49836962	789624	7	134,46,125,99,121,163,72,	0,229,830,10107,10628,11444,18549,
#Partially deleted in new
chr19	49818341	49836962	chr19:49818341-49836962	1	+	49818341	49836861	789624	10	134,46,125,99,121,75,86,75,1,119,	0,229,830,10107,10628,11444,11521,11746,18497,18502,
#Partially deleted in new
chr19	49818341	49836962	chr19:49818341-49836962	1	+	49818341	49836944	789624	13	134,23,5,144,129,86,58,108,192,72,219,181,116,	0,229,12396,12402,12991,13594,13758,13966,16644,17192,17385,17884,18505,
#Deleted in new
chr19	49830842	49832415	chr19:49830842-49832415	0	+	49830842	49830842	8553170	4	45,129,222,108,	0,490,1093,1465,
#Deleted in new
chr19	49832017	49832099	chr19:49832017-49832099	3	+	49832017	49832017	5263520	1	82,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	49832883	49836979	chr19:49832883-49836979	0	+	49832883	49832883	8553170	4	2294,72,219,754,	0,2650,2843,3342,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	49839226	49851057	chr19:49839226-49851057	1	-	49839226	49839226	8553170	3	850,283,2048,	0,5089,9783,
#Partially deleted in new
chr19	49850734	49857782	chr19:49850734-49857782	0	+	49850880	49857782	789624	7	362,138,83,58,108,156,90,	0,3671,3917,4096,4235,6240,6958,
#Partially deleted in new
chr19	49850734	49860740	chr19:49850734-49860740	0	+	49850880	49857914	789624	13	221,138,83,58,108,156,90,69,58,105,198,69,127,	0,3671,3917,4096,4235,6240,6958,7174,7322,7814,9251,9533,9879,
#Partially deleted in new
chr19	49850753	49860739	chr19:49850753-49860739	1	+	49850880	49860319	789624	13	202,138,83,58,108,156,90,74,58,105,128,69,174,	0,3652,3898,4077,4216,6221,6939,7150,7303,7795,9302,9514,9812,
#Partially deleted in new
chr19	49850827	49860713	chr19:49850827-49860713	1	+	49850880	49860279	789624	13	128,138,83,58,108,156,90,74,58,105,198,69,148,	0,3578,3824,4003,4142,6147,6865,7076,7229,7721,9158,9440,9738,
#Partially deleted in new
chr19	49850836	49855644	chr19:49850836-49855644	0	+	49850836	49850836	8553170	5	119,138,83,58,675,	0,3569,3815,3994,4133,
#Partially deleted in new
chr19	49850988	49855146	chr19:49850988-49855146	0	+	49850988	49850988	8553170	5	108,138,83,58,177,	0,3417,3663,3842,3981,
#Partially deleted in new
chr19	49850998	49858637	chr19:49850998-49858637	0	+	49850998	49850998	8553170	10	132,138,83,58,108,156,90,74,58,89,	0,3407,3653,3832,3971,5976,6694,6905,7058,7550,
#Partially deleted in new
chr19	49851019	49860725	chr19:49851019-49860725	0	+	49851019	49851019	8553170	13	189,138,83,58,108,156,90,74,58,105,198,69,112,	0,3386,3632,3811,3950,5955,6673,6884,7037,7529,8966,9248,9594,
#Partially deleted in new
chr19	49851158	49860733	chr19:49851158-49860733	3	+	49851328	49860279	789624	12	341,138,83,58,108,156,90,74,58,105,198,466,	0,3247,3493,3672,3811,5816,6534,6745,6898,7390,8827,9109,
#Partially deleted in new
chr19	49851190	49860744	chr19:49851190-49860744	1	+	49851328	49860279	789624	13	309,138,83,58,108,156,90,74,58,105,198,69,131,	0,3215,3461,3640,3779,5784,6502,6713,6866,7358,8795,9077,9423,
#Partially deleted in new
chr19	49851224	49860740	chr19:49851224-49860740	1	+	49851328	49860279	789624	13	275,138,83,58,108,156,90,74,58,105,198,69,175,	0,3181,3427,3606,3745,5750,6468,6679,6832,7324,8761,9043,9341,
#Partially deleted in new
chr19	49851386	49854997	chr19:49851386-49854997	0	+	49851386	49851386	8553170	3	113,138,346,	0,3019,3265,
#Deleted in new
chr19	49851402	49852696	chr19:49851402-49852696	0	+	49851402	49851402	8553170	2	97,637,	0,657,
#Partially deleted in new
chr19	49851952	49855065	chr19:49851952-49855065	0	+	49851952	49851952	8553170	5	115,138,83,58,96,	0,2453,2699,2878,3017,
#Partially deleted in new
chr19	49852886	49854967	chr19:49852886-49854967	3	-	49852886	49852886	8553170	3	323,137,24,	0,1568,2057,
#Partially deleted in new
chr19	49854405	49857121	chr19:49854405-49857121	0	+	49854405	49857121	789624	4	138,83,58,147,	0,246,425,2569,
#Deleted in new
chr19	49854590	49854651	chr19:49854590-49854651	3	+	49854590	49854590	5263520	1	61,	0,
#Partially deleted in new
chr19	49855054	49858114	chr19:49855054-49858114	0	+	49855054	49855054	8553170	5	257,156,90,74,58,	0,1920,2638,2849,3002,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	49856135	49860740	chr19:49856135-49860740	0	+	49856135	49856135	8553170	8	995,90,74,58,105,198,69,127,	0,1557,1768,1921,2413,3850,4132,4478,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	49856503	49858383	chr19:49856503-49858383	0	+	49856503	49856503	8553170	1	1880,	0,
#Deleted in new
chr19	49856969	49859289	chr19:49856969-49859289	3	-	49856969	49856969	789624	5	103,81,73,255,84,	0,1377,1584,1873,2236,
#Deleted in new
chr19	49857042	49858863	chr19:49857042-49858863	0	+	49857042	49857042	8553170	5	88,90,74,58,315,	0,650,861,1014,1506,
#Partially deleted in new
chr19	49857906	49860742	chr19:49857906-49860742	0	+	49857906	49860279	789624	6	71,58,105,90,69,129,	0,150,642,2187,2361,2707,
#Deleted in new
chr19	49858153	49859287	chr19:49858153-49859287	1	-	49858153	49858153	8553170	2	274,445,	0,689,
#Deleted in new
chr19	49858294	49859026	chr19:49858294-49859026	0	-	49858294	49858294	8553170	2	332,184,	0,548,
#Deleted in new
chr19	49859881	49860514	chr19:49859881-49860514	0	-	49859881	49859881	8553170	2	275,273,	0,360,
#Deleted in new
chr19	49860098	49861666	chr19:49860098-49861666	0	-	49860098	49861666	789624	2	58,59,	0,1509,
#Deleted in new
chr19	49860138	49860742	chr19:49860138-49860742	0	+	49860138	49860267	789624	2	198,129,	0,475,
#Partially deleted in new
chr19	49861203	49867886	chr19:49861203-49867886	3	-	49861247	49867204	0	17	162,62,88,110,62,97,93,71,49,72,108,58,80,300,47,164,418,	0,245,404,568,840,981,1167,1334,1486,2485,2760,2975,3120,3923,5195,5850,6265,
#Partially deleted in new
chr19	49861203	49867234	chr19:49861203-49867234	0	-	49866523	49867204	789624	16	162,62,88,110,62,97,93,71,49,72,108,58,80,300,130,181,	0,245,404,568,840,981,1167,1334,1486,2485,2760,2975,3120,3923,5195,5850,
#Partially deleted in new
chr19	49861203	49867010	chr19:49861203-49867010	0	-	49861203	49861203	8553170	14	162,62,88,110,62,97,93,71,49,72,108,225,300,612,	0,245,404,568,840,981,1167,1334,1486,2485,2760,2975,3923,5195,
#Deleted in new
chr19	49861203	49861896	chr19:49861203-49861896	0	-	49861203	49861203	8553170	3	162,62,289,	0,245,404,
#Partially deleted in new
chr19	49861203	49867555	chr19:49861203-49867555	1	-	49861335	49867204	789624	16	162,62,88,62,97,93,71,49,72,108,58,80,300,47,164,87,	0,245,404,840,981,1167,1334,1486,2485,2760,2975,3120,3923,5195,5850,6265,
#Deleted in new
chr19	49861203	49862209	chr19:49861203-49862209	0	-	49861203	49861203	8553170	4	162,433,62,25,	0,245,840,981,
#Partially deleted in new
chr19	49861203	49867204	chr19:49861203-49867204	0	-	49864209	49867204	789624	15	162,62,88,110,62,97,93,71,49,72,108,58,300,47,151,	0,245,404,568,840,981,1167,1334,1486,2485,2760,2975,3923,5195,5850,
#Deleted in new
chr19	49861204	49862075	chr19:49861204-49862075	0	-	49861204	49861204	8553170	4	161,62,274,32,	0,244,403,839,
#Partially deleted in new
chr19	49861214	49867258	chr19:49861214-49867258	1	-	49861247	49867204	789624	15	151,62,88,110,62,97,93,71,49,72,58,80,300,47,205,	0,234,393,557,829,970,1156,1323,1475,2474,2964,3109,3912,5184,5839,
#Partially deleted in new
chr19	49861230	49867286	chr19:49861230-49867286	1	-	49861247	49867204	0	16	135,62,88,110,62,97,93,71,49,72,108,58,80,300,47,233,	0,218,377,541,813,954,1140,1307,1459,2458,2733,2948,3093,3896,5168,5823,
#Partially deleted in new
chr19	49861239	49867576	chr19:49861239-49867576	1	-	49861247	49867204	789624	16	126,62,88,110,62,97,71,49,72,108,58,80,300,47,164,108,	0,209,368,532,804,945,1298,1450,2449,2724,2939,3084,3887,5159,5814,6229,
#Deleted in new
chr19	49861252	49861776	chr19:49861252-49861776	0	-	49861432	49861776	789624	3	258,88,5,	0,355,519,
#Deleted in new
chr19	49861264	49861502	chr19:49861264-49861502	0	-	49861264	49861502	789624	2	97,54,	0,184,
#Deleted in new
chr19	49861265	49862732	chr19:49861265-49862732	0	-	49862048	49862732	789624	8	100,62,88,110,62,93,71,43,	0,183,342,506,778,1105,1272,1424,
#Deleted in new
chr19	49861816	49864062	chr19:49861816-49864062	0	-	49861816	49861816	8553170	6	465,93,71,49,72,99,	0,554,721,873,1872,2147,
#Deleted in new
chr19	49862085	49865383	chr19:49862085-49865383	0	-	49862085	49865383	789624	8	20,97,93,71,49,72,108,257,	0,99,285,452,604,1603,1878,3041,
#Partially deleted in new
chr19	49862270	49878351	chr19:49862270-49878351	0	-	49862270	49862270	8553170	8	11,93,71,49,72,108,225,182,	0,100,267,419,1418,1693,1908,15899,
#Deleted in new
chr19	49862800	49863970	chr19:49862800-49863970	0	-	49862800	49862800	8553170	3	21,72,7,	0,888,1163,
#Partially deleted in new
chr19	49863730	49867880	chr19:49863730-49867880	0	-	49865161	49867204	789624	8	30,108,58,80,116,47,164,202,	0,233,448,593,1396,2668,3323,3948,
#Partially deleted in new
chr19	49863965	49867909	chr19:49863965-49867909	0	-	49863965	49867204	789624	7	106,58,80,300,47,164,231,	0,213,358,1161,2433,3088,3713,
#Partially deleted in new
chr19	49864371	49867588	chr19:49864371-49867588	0	-	49864371	49867204	789624	5	32,300,47,164,94,	0,755,2027,2682,3123,
#Deleted in new
chr19	49864391	49865542	chr19:49864391-49865542	0	-	49864391	49864391	8553170	2	12,416,	0,735,
#Partially deleted in new
chr19	49865251	49867533	chr19:49865251-49867533	0	-	49866523	49867204	789624	4	175,130,164,65,	0,1147,1802,2217,
#Partially deleted in new
chr19	49865380	49866848	chr19:49865380-49866848	0	-	49865380	49866842	789624	3	46,47,97,	0,1018,1371,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	49865953	49867564	chr19:49865953-49867564	0	-	49865953	49865953	8553170	3	492,164,96,	0,1100,1515,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	49866031	49867258	chr19:49866031-49867258	0	-	49866031	49866031	8553170	2	414,205,	0,1022,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	49866140	49867561	chr19:49866140-49867561	0	-	49866140	49866140	8553170	3	388,164,93,	0,913,1328,
#Deleted in new
chr19	49867158	49867352	chr19:49867158-49867352	0	-	49867158	49867204	789624	2	59,41,	0,153,
#Deleted in new
chr19	49867195	49867701	chr19:49867195-49867701	0	-	49867195	49867204	8553170	3	22,64,23,	0,273,483,
#Partially deleted in new
chr19	49869032	49878356	chr19:49869032-49878356	3	-	49869916	49873295	0	5	1028,170,78,386,187,	0,2514,2779,3884,9137,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	49869037	49875285	chr19:49869037-49875285	1	-	49869916	49873295	0	4	1023,170,78,2369,	0,2509,2774,3879,
#Partially deleted in new
chr19	49869038	49877340	chr19:49869038-49877340	1	-	49869916	49873295	0	5	1022,170,78,386,104,	0,2508,2773,3878,8198,
#Partially deleted in new
chr19	49869038	49877279	chr19:49869038-49877279	1	-	49869916	49873295	0	5	1022,170,78,386,255,	0,2508,2773,3878,7986,
#Partially deleted in new
chr19	49869045	49876249	chr19:49869045-49876249	1	-	49869916	49873295	0	5	1015,170,78,386,376,	0,2501,2766,3871,6828,
#Partially deleted in new
chr19	49869045	49878028	chr19:49869045-49878028	1	-	49869916	49876655	0	5	1015,170,78,386,1426,	0,2501,2766,3871,7557,
#Partially deleted in new
chr19	49872969	49878459	chr19:49872969-49878459	0	-	49872969	49873295	789624	2	333,290,	0,5200,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	49873195	49873800	chr19:49873195-49873800	0	-	49873195	49873295	789624	2	107,331,	0,274,
#Deleted in new
chr19	49876657	49878356	chr19:49876657-49878356	0	-	49876657	49876657	8553170	2	141,187,	0,1512,
#Partially deleted in new
chr19	49877424	49888744	chr19:49877424-49888744	3	+	49877723	49888624	789624	17	320,99,75,124,208,112,159,129,104,95,117,101,100,98,117,87,321,	0,718,1073,2854,3843,4616,4817,5339,5548,6226,6828,7034,7234,10051,10293,10806,10999,
#Partially deleted in new
chr19	49877424	49888749	chr19:49877424-49888749	1	+	49883666	49888246	789624	18	320,99,75,124,208,112,159,129,104,95,117,101,100,98,103,13,87,326,	0,718,1073,2854,3843,4616,4817,5339,5548,6226,6828,7034,7234,10051,10293,10588,10806,10999,
#Partially deleted in new
chr19	49877665	49888743	chr19:49877665-49888743	1	+	49877723	49888624	789624	16	79,75,124,208,112,159,129,104,95,117,101,100,98,117,87,320,	0,832,2613,3602,4375,4576,5098,5307,5985,6587,6793,6993,9810,10052,10565,10758,
#Partially deleted in new
chr19	49877701	49883002	chr19:49877701-49883002	0	+	49877723	49879355	789624	10	43,99,75,182,124,208,112,159,129,30,	0,441,796,1621,2577,3566,4339,4540,5062,5271,
#Partially deleted in new
chr19	49878075	49881464	chr19:49878075-49881464	0	+	49878075	49878075	8553170	4	166,75,124,191,	0,422,2203,3198,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	49878186	49885534	chr19:49878186-49885534	0	+	49878186	49885233	789624	13	55,75,124,208,112,159,129,104,95,117,101,100,363,	0,311,2092,3081,3854,4055,4577,4786,5464,6066,6272,6472,6985,
#Partially deleted in new
chr19	49878549	49888748	chr19:49878549-49888748	0	+	49878549	49878549	8553170	15	955,124,208,112,159,129,104,95,117,101,100,98,117,87,325,	0,1729,2718,3491,3692,4214,4423,5101,5703,5909,6109,8926,9168,9681,9874,
#Partially deleted in new
chr19	49882265	49888707	chr19:49882265-49888707	0	+	49882265	49888195	789624	11	135,129,104,95,117,101,100,98,117,161,284,	0,498,707,1385,1987,2193,2393,5210,5452,5891,6158,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	49886550	49888743	chr19:49886550-49888743	0	+	49886550	49886550	8553170	4	1023,117,87,320,	0,1167,1680,1873,
#Deleted in new
chr19	49888174	49888230	chr19:49888174-49888230	3	+	49888174	49888174	5263520	1	56,	0,
#Partially deleted in new
chr19	49889653	49929539	chr19:49889653-49929539	1	-	49889669	49901717	0	10	947,137,69,202,113,239,183,123,122,214,	0,1317,1751,4614,5414,6161,11985,14545,38040,39672,
#Partially deleted in new
chr19	49889653	49896955	chr19:49889653-49896955	1	-	49889669	49896160	0	8	947,137,69,202,113,239,35,121,	0,1317,1751,4614,5414,6161,6494,7181,
#Partially deleted in new
chr19	49889653	49929539	chr19:49889653-49929539	3	-	49889669	49901717	0	10	947,137,69,202,113,239,241,123,122,214,	0,1317,1751,4614,5414,6161,11985,14545,38040,39672,
#Partially deleted in new
chr19	49889653	49929416	chr19:49889653-49929416	0	-	49895918	49901717	789624	11	947,137,69,202,113,239,35,183,123,122,91,	0,1317,1751,4614,5414,6161,6494,11985,14545,38040,39672,
#Partially deleted in new
chr19	49894273	49896868	chr19:49894273-49896868	0	-	49894273	49896160	789624	5	196,113,128,35,34,	0,794,1652,1874,2561,
#Partially deleted in new
chr19	49895814	49929496	chr19:49895814-49929496	0	-	49895814	49901717	789624	5	239,183,123,122,80,	0,5824,8384,31879,33602,
#Partially deleted in new
chr19	49895853	49929496	chr19:49895853-49929496	0	-	49895853	49896160	789624	5	200,35,123,122,171,	0,294,8345,31840,33472,
#Partially deleted in new
chr19	49895969	49929492	chr19:49895969-49929492	0	-	49895969	49896160	789624	6	84,35,183,123,122,167,	0,178,5669,8229,31724,33356,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	49906824	49929744	chr19:49906824-49929744	3	-	49908238	49909807	0	2	3060,419,	0,22501,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	49907542	49929731	chr19:49907542-49929731	1	-	49908238	49909807	0	3	2342,122,406,	0,20151,21783,
#Partially deleted in new
chr19	49908104	49929443	chr19:49908104-49929443	1	-	49908238	49909807	0	3	1780,155,118,	0,19589,21221,
#Partially deleted in new
chr19	49908104	49929475	chr19:49908104-49929475	1	-	49908238	49909807	789624	4	641,911,122,150,	0,869,19589,21221,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	49908105	49929504	chr19:49908105-49929504	1	-	49908238	49909807	0	2	1779,1811,	0,19588,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	49909176	49929504	chr19:49909176-49929504	0	-	49909176	49909176	8553170	4	102,127,155,179,	0,1928,18517,20149,
#Partially deleted in new
chr19	49909394	49929504	chr19:49909394-49929504	0	-	49909394	49909807	789624	4	490,114,122,179,	0,9113,18299,19931,
#Partially deleted in new
chr19	49909405	49917661	chr19:49909405-49917661	0	-	49909405	49909807	789624	2	479,54,	0,8202,
#Partially deleted in new
chr19	49909500	49958391	chr19:49909500-49958391	3	-	49951967	49958391	789624	3	384,82,109,	0,42390,48782,
#Partially deleted in new
chr19	49909507	49929504	chr19:49909507-49929504	0	-	49909507	49909807	789624	3	377,114,88,	0,9000,19909,
#Partially deleted in new
chr19	49909509	49913090	chr19:49909509-49913090	0	-	49909509	49909807	789624	2	375,192,	0,3389,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	49909580	49929531	chr19:49909580-49929531	0	-	49909580	49909807	789624	4	304,262,122,206,	0,1524,18113,19745,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	49909698	49929504	chr19:49909698-49929504	0	-	49909698	49909698	8553170	4	186,262,155,179,	0,1406,17995,19627,
#Partially deleted in new
chr19	49909699	49929435	chr19:49909699-49929435	0	-	49909699	49909807	789624	4	185,114,155,110,	0,8808,17994,19626,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	49909736	49929475	chr19:49909736-49929475	0	-	49909736	49909807	789624	3	148,266,150,	0,1368,19589,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	49909738	49929504	chr19:49909738-49929504	0	-	49909738	49909807	789624	3	146,262,179,	0,1366,19587,
#Partially deleted in new
chr19	49909751	49929429	chr19:49909751-49929429	0	-	49909751	49909807	789624	4	133,114,122,104,	0,8756,17942,19574,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	49909854	49929465	chr19:49909854-49929465	0	-	49909854	49909854	8553170	4	30,239,122,140,	0,1250,17839,19471,
#Partially deleted in new
chr19	49909858	49929763	chr19:49909858-49929763	0	-	49909858	49909858	8553170	3	26,122,414,	0,17835,19491,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	49911060	49917641	chr19:49911060-49917641	0	-	49911060	49911060	8553170	3	306,261,34,	0,1838,6547,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	49911172	49929465	chr19:49911172-49929465	0	-	49911172	49911172	8553170	3	171,155,140,	0,16521,18153,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	49911235	49929409	chr19:49911235-49929409	0	-	49911235	49911235	8553170	4	131,205,114,60,	0,6372,7272,18114,
#Partially deleted in new
chr19	49911318	49929482	chr19:49911318-49929482	0	-	49911318	49911318	8553170	4	48,261,122,157,	0,1580,16375,18007,
#Partially deleted in new
chr19	49912938	49929514	chr19:49912938-49929514	0	-	49912938	49912938	8553170	3	221,155,189,	0,14755,16387,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	49928701	49933298	chr19:49928701-49933298	1	+	49930850	49933092	789624	4	305,158,297,877,	0,541,2030,3720,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	49929142	49933935	chr19:49929142-49933935	3	+	49930850	49933092	789624	3	258,297,1514,	0,1589,3279,
#Partially deleted in new
chr19	49929216	49931229	chr19:49929216-49931229	1	+	49930850	49931117	789624	2	184,498,	0,1515,
#Partially deleted in new
chr19	49929221	49932608	chr19:49929221-49932608	0	+	49930850	49932608	789624	4	179,165,297,187,	0,479,1510,3200,
#Partially deleted in new
chr19	49930218	49932632	chr19:49930218-49932632	0	+	49930850	49932632	789624	3	214,297,211,	0,513,2203,
#Deleted in new
chr19	49933063	49933137	chr19:49933063-49933137	3	+	49933063	49933063	5263520	1	74,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	49948984	49961172	chr19:49948984-49961172	3	-	49949969	49961081	789624	11	1252,82,97,288,258,48,264,48,285,384,167,	0,2906,3313,9298,9658,10045,10375,10788,11152,11567,12021,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	49949299	49961081	chr19:49949299-49961081	1	-	49949969	49961081	789624	10	937,82,97,258,48,264,48,285,384,76,	0,2591,2998,9343,9730,10060,10473,10837,11252,11706,
#Deleted in new
chr19	49949315	49949527	chr19:49949315-49949527	3	-	49949315	49949315	8553170	1	212,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	49949669	49958458	chr19:49949669-49958458	0	-	49951967	49958458	789624	3	567,82,176,	0,2221,8613,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	49969672	49975814	chr19:49969672-49975814	7	+	49969672	49969672	16724991	10	69,380,285,264,48,258,94,80,44,988,	0,139,650,1448,1994,2171,2928,3370,3822,5154,
#Deleted in new
chr19	49969701	49973110	chr19:49969701-49973110	5	+	49969701	49969701	16724991	8	40,380,285,264,48,258,94,68,	0,110,621,1419,1965,2142,2899,3341,
#Partially deleted in new
chr19	49976466	50025386	chr19:49976466-50025386	1	-	49979093	50016162	0	15	318,160,59,121,133,93,106,85,67,65,258,150,140,63,120,	0,2616,4488,11905,13172,16393,18347,18724,21037,24323,31102,32769,39557,44118,48800,
#Partially deleted in new
chr19	49976491	50025372	chr19:49976491-50025372	1	-	49979093	50016162	0	14	293,160,59,121,133,93,106,85,67,65,258,140,63,106,	0,2591,4463,11880,13147,16368,18322,18699,21012,24298,31077,39532,44093,48775,
#Partially deleted in new
chr19	49976759	50025946	chr19:49976759-50025946	3	-	49979093	50016162	0	15	25,160,59,121,133,93,106,85,67,65,258,150,140,63,601,	0,2323,4195,11612,12879,16100,18054,18431,20744,24030,30809,32476,39264,43825,48586,
#Partially deleted in new
chr19	49978568	50025369	chr19:49978568-50025369	0	-	49992926	50016162	789624	11	674,59,121,133,93,106,65,258,140,63,24,	0,2386,9803,11070,14291,16245,22221,29000,37455,42016,46777,
#Partially deleted in new
chr19	49978712	50025402	chr19:49978712-50025402	1	-	49979093	50016162	0	13	530,59,121,133,93,106,85,67,65,258,140,63,57,	0,2242,9659,10926,14147,16101,16478,18791,22077,28856,37311,41872,46633,
#Partially deleted in new
chr19	49978759	50025369	chr19:49978759-50025369	1	-	49979093	50016162	0	14	483,59,121,133,93,106,85,67,65,258,150,140,63,24,	0,2195,9612,10879,14100,16054,16431,18744,22030,28809,30476,37264,41825,46586,
#Partially deleted in new
chr19	49978877	49981184	chr19:49978877-49981184	0	-	49978877	49978877	8553170	2	365,230,	0,2077,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	49981653	50020649	chr19:49981653-50020649	1	-	49982166	50016162	789624	11	535,121,133,93,106,85,67,65,258,140,65,	0,6718,7985,11206,13160,13537,15850,19136,25915,34370,38931,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	49981699	50025327	chr19:49981699-50025327	1	-	49982166	50016162	0	13	489,121,133,93,106,85,67,65,258,150,140,63,61,	0,6672,7939,11160,13114,13491,15804,19090,25869,27536,34324,38885,43567,
#Partially deleted in new
chr19	49986298	49992910	chr19:49986298-49992910	0	-	49986495	49992910	789624	4	246,121,133,51,	0,2073,3340,6561,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	49986741	49997541	chr19:49986741-49997541	0	-	49986741	49986741	8553170	7	192,121,133,93,106,85,38,	0,1630,2897,6118,8072,8449,10762,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	49987700	50025372	chr19:49987700-50025372	1	-	49988367	50016162	789624	12	792,133,93,106,85,67,65,258,150,140,63,27,	0,1938,5159,7113,7490,9803,13089,19868,21535,28323,32884,37645,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	49988290	50025369	chr19:49988290-50025369	0	-	50009367	50016162	789624	13	202,133,93,106,85,67,65,258,150,62,140,63,24,	0,1348,4569,6523,6900,9213,12499,19278,20945,27441,27733,32294,37055,
#Partially deleted in new
chr19	49989665	50020649	chr19:49989665-50020649	0	-	49992926	50016162	789624	8	106,93,106,65,258,150,140,65,	0,3194,5148,11124,17903,19570,26358,30919,
#Partially deleted in new
chr19	49989695	50025370	chr19:49989695-50025370	0	-	49989695	49989695	8553170	10	76,93,106,85,65,258,150,140,63,25,	0,3164,5118,5495,11094,17873,19540,26328,30889,35650,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	49994862	50020647	chr19:49994862-50020647	0	-	50009367	50016162	789624	7	57,65,258,150,62,140,63,	0,5927,12706,14373,20869,21161,25722,
#Partially deleted in new
chr19	49995204	50025139	chr19:49995204-50025139	0	-	49995204	50016162	789624	6	71,65,258,140,63,225,	0,5585,12364,20819,25380,29710,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	49997001	49999198	chr19:49997001-49999198	0	-	49997001	49997001	8553170	1	2197,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	49997543	50001415	chr19:49997543-50001415	0	-	49997543	49997543	8553170	2	27,626,	0,3246,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	49999267	50001377	chr19:49999267-50001377	0	-	49999267	49999267	8553170	1	2110,	0,
#Partially deleted in new
chr19	50007568	50025139	chr19:50007568-50025139	0	-	50007568	50016162	789624	5	258,150,140,63,225,	0,1667,8455,13016,17346,
#Partially deleted in new
chr19	50007568	50025402	chr19:50007568-50025402	0	-	50007568	50016162	789624	5	258,54,140,63,57,	0,1667,8455,13016,17777,
#Partially deleted in new
chr19	50007608	50025936	chr19:50007608-50025936	0	-	50007608	50016162	789624	5	218,150,140,63,269,	0,1627,8415,12976,18059,
#Partially deleted in new
chr19	50007777	50025372	chr19:50007777-50025372	0	-	50007777	50016162	789624	5	49,150,140,186,27,	0,1458,8246,12684,17568,
#Partially deleted in new
chr19	50008755	50025439	chr19:50008755-50025439	0	-	50008755	50008755	8553170	5	56,150,140,63,94,	0,480,7268,11829,16590,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	50015673	50025370	chr19:50015673-50025370	0	-	50015673	50015673	8553170	3	490,63,25,	0,4911,9672,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	50019018	50019320	chr19:50019018-50019320	3	+	50019018	50019018	8553170	1	302,	0,
#Partially deleted in new
chr19	50025713	50041817	chr19:50025713-50041817	0	+	50031082	50041817	789624	5	82,230,78,127,88,	0,179,5300,13447,16016,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	50025721	50048776	chr19:50025721-50048776	3	+	50031082	50047059	0	6	74,230,200,127,90,4107,	0,171,5170,13439,16008,18948,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	50025805	50048772	chr19:50025805-50048772	1	+	50031082	50047059	0	5	317,78,127,90,4103,	0,5208,13355,15924,18864,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	50025954	50048772	chr19:50025954-50048772	1	+	50031082	50047059	0	5	168,200,127,90,4103,	0,4937,13206,15775,18715,
#Partially deleted in new
chr19	50026004	50047167	chr19:50026004-50047167	1	+	50039187	50047059	789624	4	118,127,90,2498,	0,13156,15725,18665,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	50026039	50053414	chr19:50026039-50053414	1	+	50031082	50053197	789624	5	83,78,127,90,225,	0,4974,13121,15690,27150,
#Partially deleted in new
chr19	50026057	50044766	chr19:50026057-50044766	0	+	50039187	50040628	789624	5	65,127,96,90,97,	0,13103,14476,15672,18612,
#Partially deleted in new
chr19	50026113	50044750	chr19:50026113-50044750	0	+	50031082	50044750	789624	5	60,200,127,90,81,	0,4778,13047,15616,18556,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	50041091	50042784	chr19:50041091-50042784	0	+	50041091	50041091	8553170	1	1693,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	50043195	50051062	chr19:50043195-50051062	0	-	50043195	50043195	8553170	3	233,156,181,	0,1436,7686,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	50043317	50051035	chr19:50043317-50051035	3	-	50043317	50043317	8553170	4	111,156,127,168,	0,1314,4641,7550,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	50050588	50066793	chr19:50050588-50066793	3	+	50050588	50050588	789624	3	606,200,719,	0,11211,15486,
#Partially deleted in new
chr19	50058881	50060232	chr19:50058881-50060232	7	-	50058881	50058881	16724991	1	1351,	0,
#Partially deleted in new
chr19	50075122	50075902	chr19:50075122-50075902	3	+	50075122	50075122	8553170	2	71,504,	0,276,
#Partially deleted in new
chr19	50152547	50163195	chr19:50152547-50163195	3	-	50152608	50163194	789624	7	104,127,81,21,87,75,233,	0,2052,5720,6682,6946,10191,10415,
#Partially deleted in new
chr19	50152590	50163180	chr19:50152590-50163180	0	-	50162749	50163180	789624	7	61,127,81,21,87,73,218,	0,2009,5677,6639,6903,10148,10372,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	50159965	50163127	chr19:50159965-50163127	0	-	50160751	50163127	789624	4	331,322,75,165,	0,493,2773,2997,
#Partially deleted in new
chr19	50188185	50309790	chr19:50188185-50309790	3	+	50210365	50309790	0	42	122,408,157,28,103,24,93,64,99,141,96,119,153,174,174,115,188,122,70,161,109,132,207,138,124,172,213,145,207,105,153,249,213,213,162,129,89,124,209,109,173,151,	0,22177,29429,34897,35061,35968,37399,38717,42339,43744,56056,58818,60801,61464,62329,64453,69113,70958,72460,73289,75126,78691,79975,83223,83663,84374,87805,88571,89897,91851,92045,93408,98296,101250,102701,104075,105047,105378,113475,118863,120819,121454,
#Partially deleted in new
chr19	50203627	50310542	chr19:50203627-50310542	1	+	50210365	50309790	0	41	44,408,157,28,103,93,64,99,141,96,119,153,174,174,115,188,122,70,161,109,132,207,138,124,172,213,145,207,105,153,249,213,213,162,129,89,124,209,109,173,903,	0,6735,13987,19455,19619,21957,23275,26897,28302,40614,43376,45359,46022,46887,49011,53671,55516,57018,57847,59684,63249,64533,67781,68221,68932,72363,73129,74455,76409,76603,77966,82854,85808,87259,88633,89605,89936,98033,103421,105377,106012,
#Partially deleted in new
chr19	50203627	50310542	chr19:50203627-50310542	1	+	50210365	50309790	0	42	44,408,157,28,103,24,93,64,99,141,96,119,153,174,174,115,188,122,70,161,109,132,207,138,124,172,213,145,207,105,153,249,213,213,162,129,89,124,209,109,173,903,	0,6735,13987,19455,19619,20526,21957,23275,26897,28302,40614,43376,45359,46022,46887,49011,53671,55516,57018,57847,59684,63249,64533,67781,68221,68932,72363,73129,74455,76409,76603,77966,82854,85808,87259,88633,89605,89936,98033,103421,105377,106012,
#Partially deleted in new
chr19	50203627	50309905	chr19:50203627-50309905	1	+	50280287	50309790	789624	30	44,39,247,157,28,103,93,64,99,141,96,119,153,105,213,145,207,105,153,249,213,213,162,129,89,124,209,109,173,266,	0,6735,6896,13987,19455,19619,21957,23275,26897,28302,40614,43376,45359,46022,72363,73129,74455,76409,76603,77966,82854,85808,87259,88633,89605,89936,98033,103421,105377,106012,
#Partially deleted in new
chr19	50203633	50310540	chr19:50203633-50310540	1	+	50210365	50309790	0	43	38,408,157,28,103,24,93,64,99,141,96,119,153,174,174,115,99,188,122,70,161,109,132,207,138,124,172,213,145,207,105,153,249,213,213,162,129,89,124,209,109,173,901,	0,6729,13981,19449,19613,20520,21951,23269,26891,28296,40608,43370,45353,46016,46881,49005,51586,53665,55510,57012,57841,59678,63243,64527,67775,68215,68926,72357,73123,74449,76403,76597,77960,82848,85802,87253,88627,89599,89930,98027,103415,105371,106006,
#Partially deleted in new
chr19	50203633	50249355	chr19:50203633-50249355	0	+	50210365	50230991	789624	13	38,408,157,28,103,93,64,99,175,141,96,119,369,	0,6729,13981,19449,19613,21951,23269,26891,27191,28296,40608,43370,45353,
#Partially deleted in new
chr19	50203636	50271482	chr19:50203636-50271482	0	+	50210365	50271482	789624	24	35,408,157,28,103,24,93,64,99,141,96,119,153,174,174,115,188,122,70,161,109,132,207,74,	0,6726,13978,19446,19610,20517,21948,23266,26888,28293,40605,43367,45350,46013,46878,49002,53662,55507,57009,57838,59675,63240,64524,67772,
#Partially deleted in new
chr19	50203644	50310544	chr19:50203644-50310544	1	+	50210365	50309790	0	43	27,408,157,28,103,24,93,64,99,141,96,119,153,174,174,115,99,188,122,70,161,109,132,207,138,124,172,213,145,207,105,153,249,213,213,162,129,89,124,209,109,173,905,	0,6718,13970,19438,19602,20509,21940,23258,26880,28285,40597,43359,45342,46005,46870,48994,51575,53654,55499,57001,57830,59667,63232,64516,67764,68204,68915,72346,73112,74438,76392,76586,77949,82837,85791,87242,88616,89588,89919,98016,103404,105360,105995,
#Partially deleted in new
chr19	50205457	50210770	chr19:50205457-50210770	0	+	50210365	50210770	789624	2	97,408,	0,4905,
#Partially deleted in new
chr19	50210365	50309790	chr19:50210365-50309790	1	+	50210365	50309790	0	40	405,157,28,103,93,64,99,141,96,119,153,174,174,115,188,122,70,161,109,132,207,138,124,172,213,145,207,105,153,249,213,213,162,129,89,124,209,109,173,151,	0,7249,12717,12881,15219,16537,20159,21564,33876,36638,38621,39284,40149,42273,46933,48778,50280,51109,52946,56511,57795,61043,61483,62194,65625,66391,67717,69671,69865,71228,76116,79070,80521,81895,82867,83198,91295,96683,98639,99274,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	50258442	50258722	chr19:50258442-50258722	3	+	50258442	50258442	8553170	1	280,	0,
#Partially deleted in new
chr19	50268345	50310539	chr19:50268345-50310539	1	+	50271486	50286581	789624	21	22,138,124,172,213,145,207,105,153,249,54,158,213,162,129,89,124,209,109,173,900,	0,3063,3503,4214,7645,8411,9737,11691,11885,13248,18136,18191,21090,22541,23915,24887,25218,33315,38703,40659,41294,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	50284763	50310539	chr19:50284763-50310539	0	+	50284763	50284763	8553170	10	1931,213,162,129,89,124,209,109,173,900,	0,4672,6123,7497,8469,8800,16897,22285,24241,24876,
#Deleted in new
chr19	50308314	50310539	chr19:50308314-50310539	0	+	50308314	50308314	8553170	1	2225,	0,
#Deleted in new
chr19	50310021	50310539	chr19:50310021-50310539	3	-	50310021	50310021	8553170	2	151,306,	0,212,
#Partially deleted in new
chr19	50311936	50329246	chr19:50311936-50329246	1	-	50316074	50329082	789624	5	3054,59,192,1108,1034,	0,4096,8656,11038,16276,
#Partially deleted in new
chr19	50311941	50333515	chr19:50311941-50333515	1	-	50316074	50320710	789624	4	3049,59,192,47,	0,4091,8651,21527,
#Partially deleted in new
chr19	50315507	50329377	chr19:50315507-50329377	3	-	50320245	50329082	789624	5	584,127,192,1108,1165,	0,4715,5085,7467,12705,
#Partially deleted in new
chr19	50329721	50371440	chr19:50329721-50371440	0	+	50329721	50329721	8553170	3	74,75,86,	0,8280,41633,
#Deleted in new
chr19	50333795	50334561	chr19:50333795-50334561	5	-	50333795	50333795	16724991	2	306,255,	0,511,
#Partially deleted in new
chr19	50333799	50344761	chr19:50333799-50344761	4	-	50333799	50333799	16724991	9	302,99,145,123,200,119,124,142,89,	0,507,1029,1259,2706,3217,3525,3734,10873,
#Partially deleted in new
chr19	50333876	50344761	chr19:50333876-50344761	7	-	50333876	50333876	16724991	9	225,99,145,123,200,119,124,142,89,	0,430,952,1182,2629,3140,3448,3657,10796,
#Partially deleted in new
chr19	50334620	50344766	chr19:50334620-50344766	4	-	50334620	50334620	16724991	7	353,123,200,119,124,142,94,	0,438,1885,2396,2704,2913,10052,
#Partially deleted in new
chr19	50334633	50344763	chr19:50334633-50344763	4	-	50334633	50334633	16724991	4	340,124,142,91,	0,2691,2900,10039,
#Partially deleted in new
chr19	50337007	50344767	chr19:50337007-50344767	5	-	50337007	50337007	16724991	3	441,142,95,	0,526,7665,
#Partially deleted in new
chr19	50358476	50365830	chr19:50358476-50365830	3	-	50358552	50365621	789624	9	304,99,145,123,200,119,124,142,292,	0,534,1026,1263,2464,3186,3492,3695,7062,
#Deleted in new
chr19	50358477	50359221	chr19:50358477-50359221	0	-	50358477	50358477	8553170	2	303,211,	0,533,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	50358477	50362843	chr19:50358477-50362843	0	-	50358477	50358477	8553170	2	1385,1903,	0,2463,
#Partially deleted in new
chr19	50359605	50365625	chr19:50359605-50365625	0	-	50359605	50365621	789624	7	42,123,200,92,124,142,87,	0,134,1335,2057,2363,2566,5933,
#Partially deleted in new
chr19	50359748	50365830	chr19:50359748-50365830	0	-	50361691	50365621	789624	5	114,200,119,142,292,	0,1192,1914,2423,5790,
#Partially deleted in new
chr19	50360944	50365787	chr19:50360944-50365787	0	-	50360944	50360944	8553170	3	196,651,249,	0,718,4594,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	50361908	50362782	chr19:50361908-50362782	0	-	50361908	50361908	8553170	2	405,159,	0,715,
#Partially deleted in new
chr19	50365879	50369331	chr19:50365879-50369331	3	-	50365879	50365879	8553170	2	138,166,	0,3286,
#Deleted in new
chr19	50376456	50378155	chr19:50376456-50378155	0	+	50376456	50376456	8553170	4	120,108,62,423,	0,262,1130,1276,
#Deleted in new
chr19	50376457	50382978	chr19:50376457-50382978	1	+	50377605	50382602	789624	10	119,108,62,138,291,275,90,100,209,523,	0,261,1129,1275,1691,2064,2634,3322,5508,5998,
#Deleted in new
chr19	50376458	50382731	chr19:50376458-50382731	1	+	50377605	50382602	0	9	118,108,62,138,275,180,100,209,276,	0,260,1128,1274,2063,2543,3321,5507,5997,
#Deleted in new
chr19	50376468	50382982	chr19:50376468-50382982	3	+	50377605	50382602	0	10	108,108,62,138,291,275,180,100,209,527,	0,250,1118,1264,1680,2053,2533,3311,5497,5987,
#Deleted in new
chr19	50376472	50378678	chr19:50376472-50378678	0	+	50377605	50378678	789624	6	104,108,96,138,291,157,	0,246,1080,1260,1676,2049,
#Deleted in new
chr19	50376472	50378312	chr19:50376472-50378312	0	+	50377605	50378312	789624	4	354,62,138,164,	0,1114,1260,1676,
#Deleted in new
chr19	50376472	50382950	chr19:50376472-50382950	1	+	50377605	50382602	789624	10	104,108,62,138,291,275,48,100,209,495,	0,246,1114,1260,1676,2049,2661,3307,5493,5983,
#Deleted in new
chr19	50377244	50382944	chr19:50377244-50382944	1	+	50377605	50382602	0	9	84,62,138,291,275,180,100,209,489,	0,342,488,904,1277,1757,2535,4721,5211,
#Deleted in new
chr19	50377433	50378733	chr19:50377433-50378733	0	+	50377605	50378733	789624	4	215,138,291,212,	0,299,715,1088,
#Deleted in new
chr19	50378740	50382298	chr19:50378740-50382298	0	+	50378740	50378740	8553170	3	441,100,333,	0,1039,3225,
#Partially deleted in new
chr19	50384203	50418012	chr19:50384203-50418012	0	+	50398851	50417184	789624	26	187,203,114,147,126,169,82,130,167,105,141,111,192,89,117,114,148,96,138,176,153,133,114,53,98,171,	0,14647,15167,17574,17795,18001,18250,18408,18849,19289,21978,22203,22779,23123,24581,24918,25315,29222,29538,30611,31234,32192,32406,32841,32968,33638,
#Partially deleted in new
chr19	50384338	50418014	chr19:50384338-50418014	3	+	50398851	50417947	789624	27	52,203,114,147,126,169,82,130,167,105,141,111,192,89,117,114,148,96,138,176,153,103,133,114,53,98,173,	0,14512,15032,17439,17660,17866,18115,18273,18714,19154,21843,22068,22644,22988,24446,24783,25180,29087,29403,30476,31099,31385,32057,32271,32706,32833,33503,
#Partially deleted in new
chr19	50384339	50418010	chr19:50384339-50418010	1	+	50398851	50417947	789624	27	51,203,114,147,126,169,82,130,167,105,141,111,192,89,195,114,148,96,138,176,153,103,133,114,53,98,169,	0,14511,15031,17438,17659,17865,18114,18272,18713,19153,21842,22067,22643,22987,24367,24782,25179,29086,29402,30475,31098,31384,32056,32270,32705,32832,33502,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	50384341	50402142	chr19:50384341-50402142	0	+	50398851	50402142	789624	6	49,126,203,114,147,144,	0,10683,14509,15029,17436,17657,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr19	50384343	50416670	chr19:50384343-50416670	0	+	50398851	50413484	789624	26	47,126,203,114,147,126,169,82,130,167,105,141,111,192,89,117,114,148,76,96,138,176,122,103,133,61,	0,10681,14507,15027,17434,17655,17861,18110,18268,18709,19149,21838,22063,22639,22983,24441,24778,25175,26639,29082,29398,30471,31094,31380,32052,32266,
#Partially deleted in new
chr19	50384346	50418014	chr19:50384346-50418014	1	+	50398851	50417947	789624	27	44,203,114,147,126,169,82,130,167,105,141,111,192,89,195,114,148,96,138,176,153,103,133,114,53,98,173,	0,14504,15024,17431,17652,17858,18107,18265,18706,19146,21835,22060,22636,22980,24360,24775,25172,29079,29395,30468,31091,31377,32049,32263,32698,32825,33495,
#Partially deleted in new
chr19	50384350	50418016	chr19:50384350-50418016	1	+	50398851	50417947	789624	27	40,206,114,147,126,169,82,130,167,105,141,111,192,89,117,114,148,96,138,176,153,103,133,114,53,98,175,	0,14497,15020,17427,17648,17854,18103,18261,18702,19142,21831,22056,22632,22976,24434,24771,25168,29075,29391,30464,31087,31373,32045,32259,32694,32821,33491,
#Partially deleted in new
chr19	50384366	50402665	chr19:50384366-50402665	0	+	50384366	50384366	8553170	7	24,203,114,147,375,82,54,	0,14484,15004,17411,17632,18087,18245,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	50384372	50399484	chr19:50384372-50399484	0	+	50398851	50399484	789624	6	18,145,89,126,203,114,	0,3287,9602,10652,14478,14998,
#Partially deleted in new
chr19	50403211	50414889	chr19:50403211-50414889	0	+	50403211	50414889	789624	12	8,105,141,111,192,89,195,114,76,96,138,75,	0,281,2970,3195,3771,4115,5495,5910,6307,10214,10530,11603,
#Partially deleted in new
chr19	50407083	50413501	chr19:50407083-50413501	0	+	50407083	50413501	789624	6	91,89,117,114,76,76,	0,243,1701,2038,2435,6342,
#Partially deleted in new
chr19	50413502	50417063	chr19:50413502-50417063	0	+	50413502	50417063	789624	8	19,138,176,165,103,133,114,19,	0,239,1312,1935,2221,2893,3107,3542,
#Partially deleted in new
chr19	50413865	50417923	chr19:50413865-50417923	0	+	50413865	50417923	789624	8	14,176,153,103,133,114,98,82,	0,949,1572,1858,2530,2744,3306,3976,
#Deleted in new
chr19	50415508	50417091	chr19:50415508-50417091	0	+	50415508	50415508	8553170	4	82,805,114,47,	0,215,1101,1536,
#Partially deleted in new
chr19	50415798	50428409	chr19:50415798-50428409	3	+	50415798	50428336	789624	10	28,133,114,53,98,28,73,215,151,372,	0,597,811,1246,1373,4147,6674,7024,7806,12239,
#Deleted in new
chr19	50416312	50418016	chr19:50416312-50418016	0	+	50416312	50416312	8553170	4	411,53,98,175,	0,732,859,1529,
#Deleted in new
chr19	50416952	50418010	chr19:50416952-50418010	0	+	50416952	50416952	8553170	3	145,98,169,	0,219,889,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	50418937	50431048	chr19:50418937-50431048	3	+	50422479	50428336	789624	5	48,28,73,151,3011,	0,1008,3535,4667,9100,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	50418937	50431313	chr19:50418937-50431313	1	+	50418962	50428336	789624	6	48,28,73,215,151,3276,	0,1008,3535,3885,4667,9100,
#Partially deleted in new
chr19	50418938	50422975	chr19:50418938-50422975	0	+	50418938	50418938	8553170	3	47,28,503,	0,1007,3534,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	50418940	50423197	chr19:50418940-50423197	0	+	50418940	50418940	8553170	4	45,28,73,375,	0,1005,3532,3882,
#Partially deleted in new
chr19	50418940	50428587	chr19:50418940-50428587	1	+	50418962	50423714	789624	5	45,28,73,151,550,	0,1005,3532,4664,9097,
#Partially deleted in new
chr19	50418940	50428124	chr19:50418940-50428124	1	+	50418962	50423714	789624	6	45,28,73,215,116,87,	0,1005,3532,3882,4699,9097,
#Partially deleted in new
chr19	50418953	50423027	chr19:50418953-50423027	0	+	50418962	50423027	789624	4	32,81,73,205,	0,939,3519,3869,
#Partially deleted in new
chr19	50418957	50428989	chr19:50418957-50428989	1	+	50418962	50428085	789624	6	28,28,73,215,147,952,	0,988,3515,3865,4647,9080,
#Partially deleted in new
chr19	50432902	50466321	chr19:50432902-50466321	3	+	50432953	50466205	0	28	70,90,87,149,118,49,60,197,133,125,106,173,166,107,30,140,160,105,189,135,168,89,196,140,160,137,187,127,	0,2258,2873,3109,3714,4570,4756,7977,9278,10591,10808,12977,15322,17926,18377,18961,21117,21362,22205,22607,25684,26015,26208,27137,28639,28997,31443,33292,
#Partially deleted in new
chr19	50464230	50466319	chr19:50464230-50466319	0	+	50464230	50464230	8553170	2	302,125,	0,1964,
#Partially deleted in new
chr19	50466784	50475485	chr19:50466784-50475485	0	-	50466784	50475485	789624	3	171,111,161,	0,837,8540,
#Partially deleted in new
chr19	50466786	50476753	chr19:50466786-50476753	3	-	50467624	50476388	789624	5	169,208,179,101,624,	0,835,8538,9046,9343,
#Partially deleted in new
chr19	50466787	50476746	chr19:50466787-50476746	1	-	50467624	50476388	789624	5	168,208,131,101,617,	0,834,8537,9045,9342,
#Partially deleted in new
chr19	50466787	50476271	chr19:50466787-50476271	0	-	50466787	50476199	789624	5	168,111,131,101,142,	0,834,8537,9045,9342,
#Partially deleted in new
chr19	50466789	50476301	chr19:50466789-50476301	0	-	50467624	50476199	789624	5	166,274,131,101,172,	0,766,8535,9043,9340,
#Deleted in new
chr19	50475303	50476256	chr19:50475303-50476256	0	-	50475303	50475303	8553170	2	152,424,	0,529,
#Partially deleted in new
chr19	50476399	50483351	chr19:50476399-50483351	0	+	50476544	50476673	789624	8	324,73,110,105,182,94,87,1203,	0,1529,2557,3711,4181,4484,5461,5749,
#Partially deleted in new
chr19	50476495	50479017	chr19:50476495-50479017	0	+	50476544	50479017	789624	3	103,16,61,	0,1490,2461,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	50476498	50490870	chr19:50476498-50490870	3	+	50476544	50482259	789624	7	160,73,110,105,182,94,8722,	0,1430,2458,3612,4082,4385,5650,
#Partially deleted in new
chr19	50476498	50483351	chr19:50476498-50483351	1	+	50476544	50481947	789624	8	160,73,110,105,182,94,87,1203,	0,1430,2458,3612,4082,4385,5362,5650,
#Partially deleted in new
chr19	50476520	50483198	chr19:50476520-50483198	1	+	50476544	50482728	789624	8	138,73,110,105,182,94,107,801,	0,1408,2436,3590,4060,4363,5628,5877,
#Partially deleted in new
chr19	50476533	50483320	chr19:50476533-50483320	0	+	50476544	50476673	789624	7	190,73,110,105,182,94,1172,	0,1395,2423,3577,4047,4350,5615,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	50476942	50479066	chr19:50476942-50479066	0	+	50477138	50479066	789624	3	279,73,110,	0,986,2014,
#Deleted in new
chr19	50480118	50483351	chr19:50480118-50483351	3	-	50480118	50480118	8553170	2	92,283,	0,2950,
#Deleted in new
chr19	50481089	50481948	chr19:50481089-50481948	0	+	50481089	50481089	8553170	1	859,	0,
#Deleted in new
chr19	50486809	50487638	chr19:50486809-50487638	3	-	50486809	50486809	8553170	2	379,247,	0,582,
#Partially deleted in new
chr19	50505997	50511353	chr19:50505997-50511353	3	-	50506172	50510431	789624	5	275,195,126,163,237,	0,380,1576,4288,5119,
#Partially deleted in new
chr19	50505997	50511162	chr19:50505997-50511162	1	-	50506172	50510431	789624	5	275,195,126,160,46,	0,380,1576,4288,5119,
#Partially deleted in new
chr19	50506001	50511220	chr19:50506001-50511220	1	-	50506172	50510431	789624	4	271,195,163,104,	0,376,4284,5115,
#Partially deleted in new
chr19	50506256	50511159	chr19:50506256-50511159	0	-	50506256	50510431	789624	5	16,195,126,160,85,	0,121,1317,4029,4818,
#Deleted in new
chr19	50506445	50508029	chr19:50506445-50508029	0	-	50506445	50506445	8553170	2	127,456,	0,1128,
#Deleted in new
chr19	50510139	50511145	chr19:50510139-50511145	0	-	50510139	50510139	8553170	2	309,29,	0,977,
#Deleted in new
chr19	50511599	50514690	chr19:50511599-50514690	1	-	50511729	50514509	789624	5	174,155,221,85,213,	0,536,760,1327,2878,
#Deleted in new
chr19	50511603	50513885	chr19:50511603-50513885	3	-	50511729	50513823	789624	7	170,155,221,150,85,145,114,	0,532,756,1057,1323,1668,2168,
#Deleted in new
chr19	50511603	50512496	chr19:50511603-50512496	0	-	50511603	50511603	8553170	2	170,361,	0,532,
#Deleted in new
chr19	50511731	50514624	chr19:50511731-50514624	0	-	50511731	50512565	789624	5	42,155,221,85,134,	0,404,628,1195,2759,
#Deleted in new
chr19	50511825	50514659	chr19:50511825-50514659	0	-	50511825	50511825	8553170	2	465,169,	0,2665,
#Deleted in new
chr19	50512160	50514665	chr19:50512160-50514665	0	-	50512160	50512160	8553170	3	130,221,188,	0,199,2317,
#Deleted in new
chr19	50512643	50514668	chr19:50512643-50514668	0	-	50512643	50512643	8553170	3	167,85,191,	0,283,1834,
#Deleted in new
chr19	50512772	50514664	chr19:50512772-50514664	0	-	50512772	50514509	789624	3	38,85,187,	0,154,1705,
#Partially deleted in new
chr19	50516891	50568045	chr19:50516891-50568045	3	-	50517570	50548838	789624	3	2524,332,102,	0,31650,51052,
#Partially deleted in new
chr19	50516891	50551042	chr19:50516891-50551042	1	-	50517570	50548838	789624	3	2524,332,163,	0,31650,33988,
#Partially deleted in new
chr19	50518996	50568045	chr19:50518996-50568045	0	-	50518996	50548838	789624	3	419,332,102,	0,29545,48947,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	50555369	50557969	chr19:50555369-50557969	3	-	50555369	50555369	8553170	2	476,337,	0,2263,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	50621306	50625290	chr19:50621306-50625290	0	-	50625050	50625290	789624	2	122,445,	0,3539,
#Partially deleted in new
chr19	50621976	50638045	chr19:50621976-50638045	1	-	50622689	50637411	789624	9	505,69,133,172,121,219,388,526,782,	0,710,3185,3416,3920,7317,7807,10309,15287,
#Partially deleted in new
chr19	50621976	50639827	chr19:50621976-50639827	3	-	50622689	50637411	789624	11	505,69,133,172,121,219,388,526,527,138,38,	0,710,3185,3416,3920,7317,7807,10309,15287,17048,17813,
#Partially deleted in new
chr19	50621976	50639818	chr19:50621976-50639818	1	-	50622689	50637411	789624	11	505,69,133,172,121,219,388,526,163,138,29,	0,710,3185,3416,3920,7317,7807,10309,15287,17048,17813,
#Partially deleted in new
chr19	50622419	50626134	chr19:50622419-50626134	0	-	50622419	50622419	8553170	5	62,69,133,172,238,	0,267,2742,2973,3477,
#Partially deleted in new
chr19	50632670	50639306	chr19:50632670-50639306	0	-	50632670	50637411	789624	3	141,163,282,	0,4593,6354,
#Partially deleted in new
chr19	50649444	50659310	chr19:50649444-50659310	3	+	50649444	50659142	789624	5	67,73,121,140,364,	0,6605,6781,8544,9502,
#Partially deleted in new
chr19	50649787	50659095	chr19:50649787-50659095	0	+	50656060	50659095	789624	5	10,73,121,140,149,	0,6262,6438,8201,9159,
#Partially deleted in new
chr19	50658495	50659310	chr19:50658495-50659310	0	+	50658495	50658495	8553170	2	113,364,	0,451,
#Partially deleted in new
chr19	50661826	50716938	chr19:50661826-50716938	3	-	50661964	50716919	789624	23	856,3094,97,119,69,81,136,125,83,27,76,114,194,331,67,78,117,168,152,109,72,204,274,	0,4365,10191,24410,24917,25755,26096,27017,27370,35269,35762,36016,40640,41673,42293,42610,49544,50120,51971,52355,53832,54448,54838,
#Partially deleted in new
chr19	50661826	50689404	chr19:50661826-50689404	1	-	50661964	50689404	789624	9	856,3094,97,119,69,81,136,125,208,	0,4365,10191,24410,24917,25755,26096,27017,27370,
#Partially deleted in new
chr19	50661940	50719450	chr19:50661940-50719450	1	-	50661964	50716919	789624	25	742,3094,97,119,69,24,81,136,125,83,27,76,114,194,331,67,78,117,168,152,109,72,204,298,45,	0,4251,10077,24296,24803,25076,25641,25982,26903,27256,35155,35648,35902,40526,41559,42179,42496,49430,50006,51857,52241,53718,54334,54724,57465,
#Partially deleted in new
chr19	50661964	50716919	chr19:50661964-50716919	1	-	50661964	50716919	789624	22	718,3094,97,119,69,81,136,125,83,76,114,194,331,67,78,117,168,152,109,72,204,255,	0,4227,10053,24272,24779,25617,25958,26879,27232,35624,35878,40502,41535,42155,42472,49406,49982,51833,52217,53694,54310,54700,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	50662333	50663169	chr19:50662333-50663169	0	-	50662333	50662333	8553170	2	349,73,	0,763,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	50662629	50666733	chr19:50662629-50666733	0	-	50663159	50666733	789624	3	53,73,542,	0,467,3562,
#Deleted in new
chr19	50703698	50704506	chr19:50703698-50704506	0	-	50703698	50703698	8553170	2	488,70,	0,738,
#Partially deleted in new
chr19	50711026	50713948	chr19:50711026-50713948	0	-	50711026	50711026	8553170	3	461,168,151,	0,920,2771,
#Deleted in new
chr19	50723328	50725717	chr19:50723328-50725717	3	+	50723525	50725467	789624	4	344,187,192,696,	0,576,1081,1693,
#Deleted in new
chr19	50723386	50725718	chr19:50723386-50725718	1	+	50723525	50725467	789624	5	286,187,192,60,403,	0,518,1023,1635,1929,
#Deleted in new
chr19	50723522	50725469	chr19:50723522-50725469	1	+	50723525	50725400	789624	4	150,187,192,497,	0,382,887,1450,
#Partially deleted in new
chr19	50758381	50759192	chr19:50758381-50759192	7	+	50758381	50758381	16724991	1	811,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	50770463	50771732	chr19:50770463-50771732	3	+	50770600	50771671	789624	1	1269,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	50776140	50786117	chr19:50776140-50786117	0	-	50785811	50786104	789624	4	326,81,60,28,	0,9602,9801,9949,
#Partially deleted in new
chr19	50785725	50786210	chr19:50785725-50786210	1	-	50785811	50786104	789624	3	98,60,121,	0,216,364,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	50785730	50793142	chr19:50785730-50793142	3	-	50785811	50789656	789624	5	93,60,98,100,29,	0,211,3887,6674,7383,
#Partially deleted in new
chr19	50790414	50795224	chr19:50790414-50795224	3	+	50790414	50795158	789624	11	111,105,87,147,99,96,133,83,125,179,182,	0,179,359,1241,1658,1827,3269,3473,4042,4371,4628,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	50797703	50803875	chr19:50797703-50803875	0	-	50797703	50797703	8553170	5	1255,64,41,161,323,	0,1590,4513,4750,5849,
#Partially deleted in new
chr19	50797703	50804929	chr19:50797703-50804929	0	-	50797703	50797703	8553170	4	1255,64,41,358,	0,1590,4513,6868,
#Partially deleted in new
chr19	50797704	50804715	chr19:50797704-50804715	1	-	50798094	50798448	789624	4	1254,64,41,144,	0,1589,4512,6867,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	50797704	50804717	chr19:50797704-50804717	3	-	50798094	50798448	789624	5	1254,64,41,161,146,	0,1589,4512,4749,6867,
#Partially deleted in new
chr19	50797760	50802258	chr19:50797760-50802258	0	-	50797760	50797760	8553170	2	1597,42,	0,4456,
#Deleted in new
chr19	50798193	50798910	chr19:50798193-50798910	4	-	50798193	50798193	16724991	1	717,	0,
#Partially deleted in new
chr19	50798202	50802257	chr19:50798202-50802257	0	-	50798202	50798202	8553170	3	722,64,41,	0,1091,4014,
#Partially deleted in new
chr19	50798205	50804669	chr19:50798205-50804669	0	-	50798205	50798205	8553170	3	753,41,98,	0,4011,6366,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	50798302	50804620	chr19:50798302-50804620	0	-	50798302	50798302	8553170	5	656,64,41,161,49,	0,991,3914,4151,6269,
#Partially deleted in new
chr19	50798319	50804595	chr19:50798319-50804595	0	-	50798319	50798319	8553170	4	49,464,41,24,	0,574,3897,6252,
#Partially deleted in new
chr19	50798334	50802249	chr19:50798334-50802249	0	-	50798334	50798334	8553170	3	590,86,33,	0,937,3882,
#Partially deleted in new
chr19	50798373	50804558	chr19:50798373-50804558	0	-	50798373	50798373	8553170	4	585,64,41,92,	0,920,3843,6093,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	50798515	50802650	chr19:50798515-50802650	0	-	50798515	50798515	8553170	3	443,64,434,	0,778,3701,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	50798664	50802614	chr19:50798664-50802614	0	-	50798664	50798664	8553170	5	294,64,167,41,161,	0,629,2518,3552,3789,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	50798703	50803875	chr19:50798703-50803875	0	-	50798703	50798703	8553170	5	255,86,41,161,323,	0,568,3513,3750,4849,
#Deleted in new
chr19	50799031	50799122	chr19:50799031-50799122	3	-	50799031	50799031	789624	1	91,	0,
#Deleted in new
chr19	50799441	50799532	chr19:50799441-50799532	3	-	50799441	50799441	789624	1	91,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	50801988	50804594	chr19:50801988-50804594	0	-	50801988	50801988	8553170	2	269,23,	0,2583,
#Deleted in new
chr19	50802327	50802418	chr19:50802327-50802418	3	-	50802327	50802327	789624	1	91,	0,
#Partially deleted in new
chr19	50808144	50812707	chr19:50808144-50812707	7	-	50808144	50808144	16724991	4	68,132,147,47,	0,482,2838,4516,
#Partially deleted in new
chr19	50808873	50818668	chr19:50808873-50818668	0	+	50808873	50808873	8553170	4	97,147,130,442,	0,8510,9034,9353,
#Partially deleted in new
chr19	50808873	50818880	chr19:50808873-50818880	0	+	50808873	50808873	8553170	4	97,147,93,654,	0,8510,9071,9353,
#Partially deleted in new
chr19	50808873	50818668	chr19:50808873-50818668	3	+	50808873	50808873	8553170	6	97,71,163,147,130,439,	0,2383,3848,8510,9034,9356,
#Deleted in new
chr19	50817680	50818878	chr19:50817680-50818878	0	+	50817680	50817680	789624	3	62,130,744,	0,227,454,
#Deleted in new
chr19	50819147	50823787	chr19:50819147-50823787	0	-	50822726	50823748	789624	6	202,137,290,1064,76,85,	0,751,1006,2564,3729,4555,
#Deleted in new
chr19	50819147	50823787	chr19:50819147-50823787	0	-	50819147	50819147	8553170	4	202,545,160,85,	0,751,2564,4555,
#Deleted in new
chr19	50819152	50823784	chr19:50819152-50823784	3	-	50819193	50823748	0	5	197,137,290,160,82,	0,746,1001,2559,4550,
#Deleted in new
chr19	50819270	50820849	chr19:50819270-50820849	0	-	50819270	50819270	8553170	3	79,137,696,	0,628,883,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	50825288	50831492	chr19:50825288-50831492	0	-	50825288	50825288	8553170	4	660,541,154,43,	0,1332,2373,6161,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	50825304	50837213	chr19:50825304-50837213	1	-	50825795	50831492	789624	6	644,137,284,151,74,99,	0,1316,1573,2357,6145,11810,
#Deleted in new
chr19	50825732	50827151	chr19:50825732-50827151	0	-	50825732	50825732	8553170	1	1419,	0,
#Partially deleted in new
chr19	50825742	50831523	chr19:50825742-50831523	3	-	50825795	50831492	789624	5	206,137,284,154,74,	0,878,1135,1919,5707,
#Partially deleted in new
chr19	50825755	50831513	chr19:50825755-50831513	1	-	50825943	50831492	789624	4	193,284,151,64,	0,1122,1906,5694,
#Partially deleted in new
chr19	50825755	50831513	chr19:50825755-50831513	0	-	50826754	50831492	789624	5	193,137,166,151,64,	0,865,1240,1906,5694,
#Partially deleted in new
chr19	50827027	50833187	chr19:50827027-50833187	0	-	50827027	50827157	789624	3	134,151,89,	0,634,6071,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	50830529	50851089	chr19:50830529-50851089	3	+	50830529	50830529	789624	3	35,178,179,	0,586,20381,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	50854914	50860763	chr19:50854914-50860763	3	+	50854955	50860127	0	5	87,160,287,137,792,	0,1325,3114,3544,5057,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	50854914	50860764	chr19:50854914-50860764	0	+	50854955	50858166	789624	6	87,160,58,158,137,793,	0,1325,3114,3243,3544,5057,
#Partially deleted in new
chr19	50854914	50860007	chr19:50854914-50860007	0	+	50854955	50855270	789624	5	510,160,287,137,36,	0,1325,3114,3544,5057,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	50854914	50860764	chr19:50854914-50860764	0	+	50854914	50854914	8553170	4	1485,287,137,793,	0,3114,3544,5057,
#Partially deleted in new
chr19	50854914	50858540	chr19:50854914-50858540	0	+	50854955	50858540	789624	5	87,14,89,287,82,	0,1311,1396,3114,3544,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	50854914	50860764	chr19:50854914-50860764	1	+	50854955	50860127	789624	6	87,160,147,17,137,793,	0,1325,3114,3384,3544,5057,
#Deleted in new
chr19	50854920	50856729	chr19:50854920-50856729	0	+	50854920	50854920	8553170	2	81,490,	0,1319,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	50854920	50860762	chr19:50854920-50860762	0	+	50854920	50854920	8553170	4	81,160,567,791,	0,1319,3108,5051,
#Partially deleted in new
chr19	50854920	50858593	chr19:50854920-50858593	0	+	50854955	50858593	789624	4	64,66,287,135,	0,1413,3108,3538,
#Partially deleted in new
chr19	50854929	50859812	chr19:50854929-50859812	1	+	50854955	50859616	789624	5	72,160,158,137,283,	0,1310,3228,3529,4600,
#Partially deleted in new
chr19	50854934	50858979	chr19:50854934-50858979	1	+	50854955	50858649	0	4	67,160,287,521,	0,1305,3094,3524,
#Partially deleted in new
chr19	50854934	50860278	chr19:50854934-50860278	0	+	50854955	50858464	789624	6	67,160,146,17,137,307,	0,1305,3094,3364,3524,5037,
#Partially deleted in new
chr19	50854948	50860432	chr19:50854948-50860432	1	+	50854955	50860127	0	5	53,160,158,137,461,	0,1291,3209,3510,5023,
#Partially deleted in new
chr19	50854955	50860563	chr19:50854955-50860563	1	+	50854955	50859616	0	5	46,160,287,137,1034,	0,1284,3073,3503,4574,
#Partially deleted in new
chr19	50854971	50860204	chr19:50854971-50860204	0	+	50854971	50860127	789624	5	30,160,305,137,233,	0,1268,3057,3487,5000,
#Deleted in new
chr19	50857390	50860130	chr19:50857390-50860130	0	+	50857390	50857390	8553170	3	925,137,159,	0,1068,2581,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	50861567	50876639	chr19:50861567-50876639	0	+	50876571	50876639	789624	4	112,72,160,168,	0,11615,13153,14904,
#Partially deleted in new
chr19	50870600	50875051	chr19:50870600-50875051	0	+	50870600	50870600	8553170	3	149,72,331,	0,2582,4120,
#Partially deleted in new
chr19	50870614	50876557	chr19:50870614-50876557	0	+	50870614	50870614	8553170	4	243,72,160,86,	0,2568,4106,5857,
#Partially deleted in new
chr19	50870744	50876942	chr19:50870744-50876942	0	+	50870744	50870744	8553170	4	113,72,287,58,	0,2438,5727,6140,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	50873248	50880567	chr19:50873248-50880567	3	+	50873473	50878559	0	5	271,160,287,137,2164,	0,1472,3223,3623,5155,
#Partially deleted in new
chr19	50873297	50876921	chr19:50873297-50876921	0	+	50873473	50876921	789624	4	222,160,111,50,	0,1423,3350,3574,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	50873432	50880566	chr19:50873432-50880566	1	+	50876571	50878559	0	4	87,287,137,2163,	0,3039,3439,4971,
#Partially deleted in new
chr19	50873432	50878648	chr19:50873432-50878648	0	+	50873473	50874884	789624	5	87,246,287,137,245,	0,1288,3039,3439,4971,
#Partially deleted in new
chr19	50873432	50877295	chr19:50873432-50877295	0	+	50873432	50873432	8553170	2	87,824,	0,3039,
#Partially deleted in new
chr19	50873435	50877221	chr19:50873435-50877221	0	+	50873473	50876575	789624	3	84,287,350,	0,3036,3436,
#Partially deleted in new
chr19	50873438	50877260	chr19:50873438-50877260	0	+	50873473	50876575	789624	3	81,287,376,	0,3033,3446,
#Partially deleted in new
chr19	50873438	50878790	chr19:50873438-50878790	0	+	50873473	50876575	789624	4	81,287,137,387,	0,3033,3433,4965,
#Partially deleted in new
chr19	50873444	50879090	chr19:50873444-50879090	0	+	50873444	50873444	8553170	4	75,160,537,687,	0,1276,3027,4959,
#Partially deleted in new
chr19	50873444	50879090	chr19:50873444-50879090	0	+	50873444	50873444	8553170	3	75,537,687,	0,3027,4959,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	50873457	50880567	chr19:50873457-50880567	1	+	50873473	50878408	0	5	62,160,287,174,2164,	0,1263,3014,3414,4946,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	50873457	50880567	chr19:50873457-50880567	0	+	50873473	50876886	0	5	62,160,287,161,2164,	0,1263,3014,3427,4946,
#Deleted in new
chr19	50873473	50874780	chr19:50873473-50874780	0	+	50873473	50873473	8553170	1	1307,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	50875642	50876702	chr19:50875642-50876702	0	+	50876571	50876702	789624	2	297,231,	0,829,
#Deleted in new
chr19	50876030	50879215	chr19:50876030-50879215	0	+	50876030	50876030	8553170	3	728,137,812,	0,841,2373,
#Deleted in new
chr19	50876249	50877412	chr19:50876249-50877412	0	+	50876249	50876249	8553170	2	509,528,	0,635,
#Deleted in new
chr19	50876600	50878605	chr19:50876600-50878605	0	+	50876600	50878605	789624	4	158,137,53,202,	0,271,1103,1803,
#Deleted in new
chr19	50876943	50878614	chr19:50876943-50878614	0	+	50876943	50877292	789624	4	65,94,50,211,	0,259,763,1460,
#Deleted in new
chr19	50877443	50878888	chr19:50877443-50878888	0	+	50877443	50877443	8553170	2	313,485,	0,960,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	50882095	50896398	chr19:50882095-50896398	5	-	50882095	50882095	16724991	5	589,156,206,102,72,	0,5623,12967,13495,14231,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	50882095	50888661	chr19:50882095-50888661	7	-	50882095	50882095	16724991	2	589,943,	0,5623,
#Deleted in new
chr19	50887865	50888268	chr19:50887865-50888268	5	-	50887865	50887865	16724991	1	403,	0,
#Partially deleted in new
chr19	50906351	50910738	chr19:50906351-50910738	3	-	50906933	50910738	789624	5	735,137,251,163,61,	0,2007,2227,2900,4326,
#Deleted in new
chr19	50906352	50906820	chr19:50906352-50906820	0	-	50906352	50906352	8553170	2	200,59,	0,409,
#Partially deleted in new
chr19	50906874	50910738	chr19:50906874-50910738	0	-	50908465	50908768	789624	5	212,133,251,156,61,	0,1484,1704,2365,3803,
#Partially deleted in new
chr19	50906903	50909136	chr19:50906903-50909136	0	-	50908465	50908768	789624	4	183,133,251,124,	0,1455,1675,2109,
#Partially deleted in new
chr19	50906933	50909328	chr19:50906933-50909328	1	-	50907081	50909328	789624	3	153,251,77,	0,1645,2318,
#Partially deleted in new
chr19	50906933	50909328	chr19:50906933-50909328	0	-	50906933	50906933	8553170	3	153,471,77,	0,1425,2318,
#Partially deleted in new
chr19	50906933	50910738	chr19:50906933-50910738	0	-	50909247	50910738	789624	5	153,137,251,175,61,	0,1425,1645,2306,3744,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	50907989	50909382	chr19:50907989-50909382	0	-	50907989	50907989	8553170	2	840,143,	0,1250,
#Deleted in new
chr19	50927078	50927571	chr19:50927078-50927571	7	-	50927078	50927078	16724991	1	493,	0,
#Partially deleted in new
chr19	50943302	50953088	chr19:50943302-50953088	1	-	50943630	50952657	0	6	484,134,257,262,84,342,	0,5337,5556,6552,9282,9444,
#Partially deleted in new
chr19	50943302	50953065	chr19:50943302-50953065	1	-	50943630	50952657	0	7	484,134,257,262,84,68,116,	0,5337,5556,6552,9282,9444,9647,
#Partially deleted in new
chr19	50943302	50953093	chr19:50943302-50953093	3	-	50943630	50952657	0	6	484,134,257,262,84,144,	0,5337,5556,6552,9282,9647,
#Partially deleted in new
chr19	50943307	50952668	chr19:50943307-50952668	0	-	50943307	50943307	8553170	4	479,476,262,84,	0,5332,6547,9277,
#Partially deleted in new
chr19	50948749	50952942	chr19:50948749-50952942	0	-	50948749	50952657	789624	5	24,257,262,84,45,	0,109,1105,3835,4148,
#Partially deleted in new
chr19	50950184	50963649	chr19:50950184-50963649	3	+	50950184	50950184	8553170	4	123,202,173,328,	0,2575,8583,13137,
#Partially deleted in new
chr19	50950186	50958789	chr19:50950186-50958789	0	+	50950186	50950186	8553170	4	121,179,133,22,	0,2573,7450,8581,
#Partially deleted in new
chr19	50958630	50969673	chr19:50958630-50969673	3	-	50959163	50968104	0	7	686,137,248,157,48,51,184,	0,3113,4671,8538,9434,9910,10859,
#Partially deleted in new
chr19	50958630	50968972	chr19:50958630-50968972	1	-	50959163	50968104	0	6	686,137,248,157,48,432,	0,3113,4671,8538,9434,9910,
#Partially deleted in new
chr19	50958631	50968791	chr19:50958631-50968791	1	-	50959163	50963425	0	5	685,137,248,157,251,	0,3112,4670,8537,9909,
#Partially deleted in new
chr19	50958631	50969673	chr19:50958631-50969673	0	-	50963466	50968104	0	6	685,137,248,48,51,184,	0,3112,4670,9433,9909,10858,
#Partially deleted in new
chr19	50959148	50968196	chr19:50959148-50968196	1	-	50959163	50968104	0	5	168,137,248,157,132,	0,2595,4153,8020,8916,
#Partially deleted in new
chr19	50959157	50968767	chr19:50959157-50968767	0	-	50963466	50967295	789624	5	159,137,248,157,227,	0,2586,4144,8011,9383,
#Partially deleted in new
chr19	50959157	50968767	chr19:50959157-50968767	0	-	50963466	50968104	0	5	159,137,248,48,227,	0,2586,4144,8907,9383,
#Deleted in new
chr19	50962196	50962781	chr19:50962196-50962781	3	-	50962196	50962196	8553170	1	585,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	50976481	50984099	chr19:50976481-50984099	0	-	50980359	50982399	789624	5	1210,137,248,131,249,	0,3306,3758,5845,7369,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	50976487	50983815	chr19:50976487-50983815	3	-	50977535	50982399	0	6	1204,137,248,148,131,44,	0,3300,3752,5279,5839,7284,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	50976787	50984038	chr19:50976787-50984038	1	-	50977535	50982399	0	6	904,137,248,148,131,188,	0,3000,3452,4979,5539,7063,
#Partially deleted in new
chr19	50977358	50984038	chr19:50977358-50984038	1	-	50977535	50981771	0	5	333,137,248,148,188,	0,2429,2881,4408,6492,
#Deleted in new
chr19	50980285	50983914	chr19:50980285-50983914	0	-	50980285	50981771	789624	4	202,148,131,143,	0,1481,2041,3486,
#Deleted in new
chr19	50982094	50984064	chr19:50982094-50984064	0	-	50982094	50982094	8553170	2	363,214,	0,1756,
#Partially deleted in new
chr19	50996006	51001604	chr19:50996006-51001604	1	-	50996058	51001167	0	6	208,134,263,295,78,73,	0,1744,3989,4417,5091,5525,
#Partially deleted in new
chr19	50996007	51001702	chr19:50996007-51001702	1	-	50996058	51000125	789624	5	207,134,263,78,171,	0,1743,3988,5090,5524,
#Partially deleted in new
chr19	50996007	51001702	chr19:50996007-51001702	1	-	50996185	51001167	0	3	207,78,171,	0,5090,5524,
#Partially deleted in new
chr19	50996007	51002711	chr19:50996007-51002711	3	-	50996058	51001167	0	7	207,134,263,160,78,178,304,	0,1743,3988,4416,5090,5524,6400,
#Partially deleted in new
chr19	50996008	51001668	chr19:50996008-51001668	1	-	50996058	51001167	0	4	206,134,78,137,	0,1742,5089,5523,
#Partially deleted in new
chr19	50996008	50997967	chr19:50996008-50997967	0	-	50996008	50996008	8553170	2	206,217,	0,1742,
#Partially deleted in new
chr19	50996017	51001167	chr19:50996017-51001167	1	-	50996185	51001167	0	2	197,70,	0,5080,
#Partially deleted in new
chr19	50996017	51003829	chr19:50996017-51003829	0	-	51003110	51003829	789624	5	197,134,78,853,126,	0,1733,5080,6390,7686,
#Partially deleted in new
chr19	50996083	50999235	chr19:50996083-50999235	0	-	50996083	50996083	8553170	3	131,134,283,	0,1667,2869,
#Partially deleted in new
chr19	50996159	51001126	chr19:50996159-51001126	0	-	51000124	51001126	789624	4	55,134,263,29,	0,1591,3836,4938,
#Deleted in new
chr19	51000197	51002678	chr19:51000197-51002678	0	-	51000197	51001167	789624	4	61,160,78,271,	0,226,900,2210,
#Deleted in new
chr19	51000384	51001603	chr19:51000384-51001603	0	-	51000384	51000384	8553170	3	334,78,72,	0,713,1147,
#Partially deleted in new
chr19	51000549	51009581	chr19:51000549-51009581	3	-	51003110	51009547	789624	7	34,78,853,137,266,157,77,	0,548,1858,3154,5908,8633,8955,
#Partially deleted in new
chr19	51003110	51009634	chr19:51003110-51009634	2	-	51006580	51009547	789624	4	150,137,266,130,	0,593,3347,6394,
#Partially deleted in new
chr19	51003110	51009548	chr19:51003110-51009548	1	-	51003110	51009547	789624	5	150,137,266,157,44,	0,593,3347,6072,6394,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	51012738	51020026	chr19:51012738-51020026	1	-	51014799	51019130	0	6	2214,134,275,181,100,207,	0,2678,3143,4371,6304,7081,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	51012744	51020175	chr19:51012744-51020175	3	-	51014799	51019130	0	6	2208,134,275,181,100,108,	0,2672,3137,4365,6298,7323,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	51014269	51019764	chr19:51014269-51019764	1	-	51014799	51019130	0	6	683,134,275,181,97,138,	0,1147,1612,2840,4773,5357,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	51014509	51018849	chr19:51014509-51018849	0	-	51016001	51016133	789624	5	443,134,275,181,395,	0,907,1372,2600,3945,
#Partially deleted in new
chr19	51015812	51017322	chr19:51015812-51017322	0	-	51015812	51015812	8553170	2	344,213,	0,1297,
#Partially deleted in new
chr19	51015996	51020175	chr19:51015996-51020175	0	-	51015996	51019130	789624	4	160,181,100,108,	0,1113,3046,4071,
#Partially deleted in new
chr19	51022215	51026602	chr19:51022215-51026602	1	-	51022544	51025631	789624	4	482,137,75,65,	0,876,3376,4322,
#Partially deleted in new
chr19	51022230	51028039	chr19:51022230-51028039	3	-	51022544	51025631	789624	6	467,137,266,157,75,96,	0,861,1814,2407,3361,5713,
#Partially deleted in new
chr19	51022232	51027703	chr19:51022232-51027703	1	-	51022544	51027517	789624	6	465,137,266,157,75,247,	0,859,1812,2405,3359,5224,
#Partially deleted in new
chr19	51022235	51027623	chr19:51022235-51027623	0	-	51024256	51027517	789624	6	462,137,266,161,75,167,	0,856,1809,2398,3356,5221,
#Partially deleted in new
chr19	51022235	51026614	chr19:51022235-51026614	1	-	51022544	51025631	789624	6	462,137,266,157,75,77,	0,856,1809,2402,3356,4302,
#Partially deleted in new
chr19	51022235	51024211	chr19:51022235-51024211	0	-	51022544	51024211	789624	3	429,137,167,	0,856,1809,
#Partially deleted in new
chr19	51022488	51027954	chr19:51022488-51027954	1	-	51022544	51025631	789624	6	209,137,337,161,75,11,	0,603,1556,2145,3103,5455,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	51022689	51026616	chr19:51022689-51026616	0	-	51022689	51022689	8553170	5	8,1219,161,75,79,	0,402,1944,2902,3848,
#Partially deleted in new
chr19	51023179	51025816	chr19:51023179-51025816	0	-	51023179	51025631	789624	5	49,266,157,75,61,	0,865,1458,2412,2576,
#Partially deleted in new
chr19	51024222	51027206	chr19:51024222-51027206	0	-	51024222	51024222	8553170	4	88,161,75,669,	0,411,1369,2315,
#Partially deleted in new
chr19	51024302	51026616	chr19:51024302-51026616	0	-	51024302	51025631	789624	4	8,157,107,79,	0,335,1289,2235,
#Partially deleted in new
chr19	51029091	51034892	chr19:51029091-51034892	3	-	51029301	51034621	789624	6	366,134,260,160,56,98,	0,1696,2784,4888,5493,5703,
#Partially deleted in new
chr19	51029091	51034741	chr19:51029091-51034741	1	-	51029301	51034621	789624	5	366,134,260,160,157,	0,1696,2784,4888,5493,
#Partially deleted in new
chr19	51029093	51035230	chr19:51029093-51035230	0	-	51034096	51034621	789624	6	119,116,134,160,216,425,	0,248,1694,4886,5331,5712,
#Partially deleted in new
chr19	51029093	51034862	chr19:51029093-51034862	0	-	51034096	51034621	789624	5	364,134,160,216,57,	0,1694,4886,5331,5712,
#Partially deleted in new
chr19	51029129	51034862	chr19:51029129-51034862	1	-	51029452	51034621	789624	5	328,134,160,56,57,	0,1658,4850,5455,5676,
#Partially deleted in new
chr19	51029129	51034862	chr19:51029129-51034862	0	-	51031798	51034621	789624	7	83,116,134,356,160,56,57,	0,212,1658,2650,4850,5455,5676,
#Partially deleted in new
chr19	51029154	51034892	chr19:51029154-51034892	1	-	51029154	51034621	789624	7	58,116,134,260,160,56,98,	0,187,1633,2721,4825,5430,5640,
#Partially deleted in new
chr19	51030075	51034335	chr19:51030075-51034335	3	+	51030075	51030075	8553170	2	28,457,	0,3803,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	51043805	51052077	chr19:51043805-51052077	3	+	51043805	51043805	8553170	2	129,314,	0,7958,
#Partially deleted in new
chr19	51056205	51065110	chr19:51056205-51065110	0	-	51058671	51065067	789624	5	570,137,58,187,95,	0,2332,3830,4227,8810,
#Partially deleted in new
chr19	51056205	51064884	chr19:51056205-51064884	0	-	51060039	51064653	789624	5	570,137,58,187,287,	0,2332,3830,4227,8392,
#Partially deleted in new
chr19	51056205	51065110	chr19:51056205-51065110	0	-	51063631	51065067	789624	6	570,137,349,187,276,95,	0,2332,3539,4227,7380,8810,
#Partially deleted in new
chr19	51056205	51064884	chr19:51056205-51064884	0	-	51060039	51064653	789624	5	570,137,349,187,287,	0,2332,3539,4227,8392,
#Partially deleted in new
chr19	51056205	51065110	chr19:51056205-51065110	0	-	51063631	51065067	789624	6	570,137,58,187,276,95,	0,2332,3830,4227,7380,8810,
#Partially deleted in new
chr19	51056536	51065110	chr19:51056536-51065110	3	-	51056586	51065067	789624	5	239,137,269,187,95,	0,2001,3288,3896,8479,
#Partially deleted in new
chr19	51056586	51065067	chr19:51056586-51065067	1	-	51056586	51065067	789624	3	189,137,52,	0,1951,8429,
#Partially deleted in new
chr19	51056586	51065067	chr19:51056586-51065067	1	-	51056586	51065067	789624	5	189,137,50,187,52,	0,1951,3457,3846,8429,
#Partially deleted in new
chr19	51059642	51065114	chr19:51059642-51065114	1	-	51059789	51065067	789624	3	451,187,99,	0,790,5373,
#Partially deleted in new
chr19	51077494	51084245	chr19:51077494-51084245	1	-	51078006	51082614	789624	8	26,164,137,254,172,62,135,110,	0,501,1320,1954,4037,5080,5227,6641,
#Partially deleted in new
chr19	51077896	51084245	chr19:51077896-51084245	3	-	51078006	51082747	789624	7	263,137,254,172,62,135,110,	0,918,1552,3635,4678,4825,6239,
#Partially deleted in new
chr19	51077968	51082886	chr19:51077968-51082886	1	-	51078006	51082614	789624	6	191,137,254,172,62,165,	0,846,1480,3563,4606,4753,
#Partially deleted in new
chr19	51097605	51108370	chr19:51097605-51108370	3	-	51098600	51104569	789624	3	1534,529,24,	0,6456,10741,
#Partially deleted in new
chr19	51119986	51122965	chr19:51119986-51122965	7	+	51119986	51119986	16724991	3	397,252,260,	0,523,2719,
#Partially deleted in new
chr19	51124907	51130310	chr19:51124907-51130310	3	+	51124974	51130079	789624	7	488,279,48,267,91,97,420,	0,689,1173,2122,3041,3506,4983,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	51124907	51136651	chr19:51124907-51136651	1	+	51124974	51136198	789624	7	488,279,48,267,91,97,690,	0,689,1173,2122,3041,3506,11054,
#Deleted in new
chr19	51127029	51128958	chr19:51127029-51128958	0	+	51127029	51128958	789624	4	267,91,97,159,	0,919,1384,1770,
#Deleted in new
chr19	51137969	51138634	chr19:51137969-51138634	7	+	51137969	51137969	16724991	3	263,115,43,	0,372,622,
#Deleted in new
chr19	51142298	51144920	chr19:51142298-51144920	0	+	51142369	51144920	789624	3	504,91,32,	0,2295,2590,
#Partially deleted in new
chr19	51142300	51153526	chr19:51142300-51153526	3	+	51142369	51153245	0	7	502,279,48,267,97,97,464,	0,2105,2611,3554,4453,4920,10762,
#Partially deleted in new
chr19	51142306	51153526	chr19:51142306-51153526	1	+	51142369	51153245	0	6	496,48,267,97,97,464,	0,2605,3548,4447,4914,10756,
#Partially deleted in new
chr19	51142369	51153245	chr19:51142369-51153245	0	+	51142369	51147225	0	3	433,97,183,	0,4851,10693,
#Partially deleted in new
chr19	51142369	51153245	chr19:51142369-51153245	1	+	51142369	51153067	0	2	433,183,	0,10693,
#Deleted in new
chr19	51143825	51144196	chr19:51143825-51144196	7	+	51143825	51143825	16724991	1	371,	0,
#Partially deleted in new
chr19	51146956	51153228	chr19:51146956-51153228	0	+	51146956	51146956	8553170	2	361,166,	0,6106,
#Partially deleted in new
chr19	51152922	51181966	chr19:51152922-51181966	3	-	51152922	51152922	789624	5	1034,55,128,53,493,	0,1321,3423,12298,28551,
#Deleted in new
chr19	51155287	51155624	chr19:51155287-51155624	7	-	51155287	51155287	16724991	1	337,	0,
#Partially deleted in new
chr19	51167327	51173524	chr19:51167327-51173524	7	+	51167327	51167327	16724991	6	114,380,279,94,101,549,	0,176,761,4738,5163,5648,
#Partially deleted in new
chr19	51167329	51173500	chr19:51167329-51173500	4	+	51167329	51167329	16724991	6	112,380,279,94,75,525,	0,174,759,4736,5187,5646,
#Deleted in new
chr19	51167337	51167883	chr19:51167337-51167883	5	+	51167337	51167337	16724991	2	104,380,	0,166,
#Partially deleted in new
chr19	51167396	51173522	chr19:51167396-51173522	4	+	51167396	51167396	16724991	4	45,380,279,1457,	0,107,692,4669,
#Partially deleted in new
chr19	51167397	51173429	chr19:51167397-51173429	4	+	51167397	51167397	16724991	7	44,380,279,48,94,75,454,	0,106,691,1205,4668,5119,5578,
#Partially deleted in new
chr19	51184904	51190809	chr19:51184904-51190809	7	+	51184904	51184904	16724991	7	334,278,48,270,97,97,187,	0,535,1017,1372,2265,2739,5718,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	51194117	51195540	chr19:51194117-51195540	7	-	51194117	51194117	16724991	2	499,373,	0,1050,
#Deleted in new
chr19	51198854	51201449	chr19:51198854-51201449	7	+	51198854	51198854	16724991	3	466,319,225,	0,681,2370,
#Partially deleted in new
chr19	51206928	51207009	chr19:51206928-51207009	3	-	51206928	51206928	5263520	1	81,	0,
#Partially deleted in new
chr19	51211079	51211888	chr19:51211079-51211888	5	+	51211079	51211079	16724991	3	66,381,97,	0,128,712,
#Partially deleted in new
chr19	51211109	51212088	chr19:51211109-51212088	7	+	51211109	51211109	16724991	3	36,381,297,	0,98,682,
#Partially deleted in new
chr19	51225063	51239942	chr19:51225063-51239942	1	+	51225118	51239688	0	6	92,279,48,97,82,425,	0,739,1245,10093,10531,14454,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	51225063	51236572	chr19:51225063-51236572	1	+	51225118	51235772	789624	5	92,279,48,97,978,	0,739,1245,10093,10531,
#Partially deleted in new
chr19	51225097	51240016	chr19:51225097-51240016	3	+	51225118	51239688	0	7	58,381,279,48,97,82,499,	0,120,705,1211,10059,10497,14420,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	51225097	51235966	chr19:51225097-51235966	1	+	51225118	51235831	0	7	58,381,279,48,97,82,144,	0,120,705,1211,10059,10497,10725,
#Partially deleted in new
chr19	51225130	51239988	chr19:51225130-51239988	0	+	51225130	51225130	8553170	6	468,279,48,97,159,471,	0,672,1178,10026,10387,14387,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	51225965	51243860	chr19:51225965-51243860	0	+	51225965	51225965	8553170	6	116,97,82,3916,66,451,	0,9191,9629,9857,17077,17444,
#Partially deleted in new
chr19	51239266	51240015	chr19:51239266-51240015	0	+	51239266	51239266	8553170	2	38,498,	0,251,
#Partially deleted in new
chr19	51246347	51267383	chr19:51246347-51267383	2	+	51264072	51267383	789624	5	49,212,282,106,11,	0,17535,19020,19429,21025,
#Partially deleted in new
chr19	51251077	51268617	chr19:51251077-51268617	0	+	51251077	51251077	789624	5	468,221,106,157,47,	0,12805,14699,16295,17493,
#Partially deleted in new
chr19	51251077	51265599	chr19:51251077-51265599	0	+	51264072	51265599	789624	3	468,212,232,	0,12805,14290,
#Partially deleted in new
chr19	51251230	51271179	chr19:51251230-51271179	3	-	51251230	51251230	8553170	3	304,82,161,	0,18932,19788,
#Partially deleted in new
chr19	51251271	51264439	chr19:51251271-51264439	0	+	51264072	51264439	789624	3	274,212,17,	0,12611,13151,
#Partially deleted in new
chr19	51263881	51269328	chr19:51263881-51269328	1	+	51264072	51268597	789624	5	213,282,106,157,758,	0,1486,1895,3491,4689,
#Partially deleted in new
chr19	51263910	51268993	chr19:51263910-51268993	1	+	51264072	51268597	789624	4	184,106,157,423,	0,1866,3462,4660,
#Partially deleted in new
chr19	51271265	51278634	chr19:51271265-51278634	0	+	51271265	51271265	8553170	2	307,180,	0,7189,
#Deleted in new
chr19	51280861	51283022	chr19:51280861-51283022	7	+	51280861	51280861	16724991	4	326,264,286,98,	0,1024,1626,2063,
#Partially deleted in new
chr19	51311847	51330354	chr19:51311847-51330354	3	+	51311847	51328759	789624	8	79,79,233,120,135,121,155,1684,	0,10216,11814,13498,14916,15232,15884,16823,
#Partially deleted in new
chr19	51331535	51339755	chr19:51331535-51339755	0	-	51337480	51339666	789624	7	1105,155,114,297,279,255,92,	0,2255,2655,5702,6394,7352,8128,
#Partially deleted in new
chr19	51331817	51342124	chr19:51331817-51342124	3	-	51332610	51342124	789624	10	823,155,114,297,279,255,285,294,855,40,	0,1973,2373,5420,6112,7070,8197,8615,9335,10267,
#Partially deleted in new
chr19	51340694	51344117	chr19:51340694-51344117	0	+	51340694	51340694	8553170	4	23,109,114,46,	0,371,1177,3377,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	51340694	51344116	chr19:51340694-51344116	3	+	51340694	51340694	8553170	5	23,109,136,124,45,	0,371,1155,2993,3377,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	51345168	51357106	chr19:51345168-51357106	1	-	51345210	51354638	0	5	213,159,63,159,2957,	0,1731,5160,7963,8981,
#Partially deleted in new
chr19	51345168	51353293	chr19:51345168-51353293	3	+	51345168	51345168	8553170	2	78,141,	0,7984,
#Partially deleted in new
chr19	51345170	51366418	chr19:51345170-51366418	3	-	51345210	51366326	0	6	211,159,63,159,159,149,	0,1729,5158,7961,8979,21099,
#Partially deleted in new
chr19	51345284	51366366	chr19:51345284-51366366	0	-	51345284	51366326	789624	5	97,159,63,159,97,	0,1615,5044,8865,20985,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	51345687	51348530	chr19:51345687-51348530	0	-	51345687	51345687	8553170	1	2843,	0,
#Partially deleted in new
chr19	51350186	51366349	chr19:51350186-51366349	0	-	51350186	51350186	8553170	4	205,159,159,80,	0,2945,3963,16083,
#Partially deleted in new
chr19	51350372	51368099	chr19:51350372-51368099	3	-	51354291	51368000	789624	4	19,159,159,214,	0,2759,3777,17513,
#Deleted in new
chr19	51367097	51369003	chr19:51367097-51369003	3	-	51367141	51368577	789624	4	118,120,141,595,	0,359,788,1311,
#Deleted in new
chr19	51367099	51367977	chr19:51367099-51367977	0	-	51367188	51367977	789624	3	298,27,92,	0,450,786,
#Deleted in new
chr19	51367099	51368979	chr19:51367099-51368979	1	-	51367141	51368577	789624	5	116,120,141,179,19,	0,357,786,1309,1861,
#Deleted in new
chr19	51371605	51372701	chr19:51371605-51372701	1	-	51371826	51372535	789624	3	230,263,323,	0,334,773,
#Deleted in new
chr19	51371611	51372715	chr19:51371611-51372715	3	-	51371776	51372535	789624	4	224,135,147,337,	0,328,549,767,
#Deleted in new
chr19	51371619	51372403	chr19:51371619-51372403	0	-	51371776	51372403	789624	3	216,135,25,	0,320,759,
#Deleted in new
chr19	51371619	51372640	chr19:51371619-51372640	1	-	51371776	51372535	789624	3	216,42,262,	0,541,759,
#Deleted in new
chr19	51371697	51372410	chr19:51371697-51372410	0	-	51371776	51372410	789624	4	138,135,42,32,	0,242,463,681,
#Partially deleted in new
chr19	51379908	51387955	chr19:51379908-51387955	1	-	51380200	51387443	789624	5	354,135,150,307,37,	0,596,2509,7234,8010,
#Partially deleted in new
chr19	51379909	51387960	chr19:51379909-51387960	3	-	51380200	51387443	789624	5	353,135,150,181,42,	0,595,2508,7359,8009,
#Partially deleted in new
chr19	51388288	51390574	chr19:51388288-51390574	3	-	51388983	51390512	789624	2	1221,97,	0,2189,
#Partially deleted in new
chr19	51388936	51390563	chr19:51388936-51390563	1	-	51388983	51389100	789624	2	573,215,	0,1412,
#Partially deleted in new
chr19	51394487	51403650	chr19:51394487-51403650	3	+	51394487	51394487	8553170	2	108,451,	0,8712,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	51396754	51403526	chr19:51396754-51403526	7	-	51396754	51396754	16724991	2	355,490,	0,6282,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	51410020	51417803	chr19:51410020-51417803	1	-	51411098	51417581	789624	10	1351,112,94,258,48,270,48,285,384,259,	0,3691,4401,5160,5547,5877,6289,6645,7061,7524,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	51410020	51417636	chr19:51410020-51417636	1	-	51411098	51417581	789624	10	1351,112,94,258,48,270,48,111,384,92,	0,3691,4401,5160,5547,5877,6289,6645,7061,7524,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	51410021	51417711	chr19:51410021-51417711	0	-	51410021	51410021	8553170	9	1350,112,94,285,258,48,460,285,167,	0,3690,4400,4802,5159,5546,5876,6644,7523,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	51410021	51417581	chr19:51410021-51417581	1	-	51411098	51417581	789624	9	1350,112,94,258,48,48,111,384,37,	0,3690,4400,5159,5546,6288,6644,7060,7523,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	51410857	51417642	chr19:51410857-51417642	1	-	51411098	51417581	789624	9	514,112,94,258,48,48,285,384,98,	0,2854,3564,4323,4710,5452,5808,6224,6687,
#Partially deleted in new
chr19	51411048	51417642	chr19:51411048-51417642	1	-	51411098	51417581	789624	10	323,112,94,258,48,270,48,141,384,98,	0,2663,3373,4132,4519,4849,5261,5617,6033,6496,
#Partially deleted in new
chr19	51411048	51417737	chr19:51411048-51417737	1	-	51411098	51417581	789624	11	323,112,94,285,258,48,270,48,111,384,193,	0,2663,3373,3775,4132,4519,4849,5261,5617,6033,6496,
#Partially deleted in new
chr19	51411053	51417698	chr19:51411053-51417698	3	-	51411098	51417581	789624	11	318,112,94,285,258,48,270,48,285,384,154,	0,2658,3368,3770,4127,4514,4844,5256,5612,6028,6491,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	51414297	51414965	chr19:51414297-51414965	3	+	51414297	51414297	8553170	2	238,254,	0,414,
#Deleted in new
chr19	51415723	51416646	chr19:51415723-51416646	1	+	51415723	51415723	8553170	2	409,218,	0,705,
#Deleted in new
chr19	51415897	51417711	chr19:51415897-51417711	0	-	51415897	51417581	789624	4	270,48,111,167,	0,412,768,1647,
#Deleted in new
chr19	51415905	51417425	chr19:51415905-51417425	3	+	51415905	51415905	8553170	3	227,208,294,	0,617,1226,
#Deleted in new
chr19	51416713	51417591	chr19:51416713-51417591	0	-	51416713	51417589	789624	3	237,277,47,	0,368,831,
#Deleted in new
chr19	51416922	51417631	chr19:51416922-51417631	0	-	51416922	51416922	8553170	2	543,87,	0,622,
#Deleted in new
chr19	51426346	51426668	chr19:51426346-51426668	7	-	51426346	51426346	16724991	1	322,	0,
#Deleted in new
chr19	51442378	51442650	chr19:51442378-51442650	7	+	51442378	51442378	16724991	1	272,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	51450846	51458452	chr19:51450846-51458452	1	-	51452378	51458387	789624	6	249,296,97,97,270,519,	0,1491,3372,3837,4571,7087,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	51450996	51458454	chr19:51450996-51458454	3	-	51452378	51458387	0	7	1637,97,97,270,48,279,521,	0,3222,3687,4421,6187,6464,6937,
#Partially deleted in new
chr19	51452375	51458456	chr19:51452375-51458456	1	-	51452378	51458387	0	6	258,97,97,270,48,523,	0,1843,2308,3042,4808,5558,
#Partially deleted in new
chr19	51455495	51457809	chr19:51455495-51457809	0	-	51455495	51455495	8553170	3	192,48,349,	0,1688,1965,
#Deleted in new
chr19	51468359	51468636	chr19:51468359-51468636	7	-	51468359	51468359	16724991	1	277,	0,
#Partially deleted in new
chr19	51478621	51490952	chr19:51478621-51490952	3	+	51478642	51490652	789624	6	73,348,273,280,136,366,	0,1711,2771,4395,6365,11965,
#Partially deleted in new
chr19	51491356	51501772	chr19:51491356-51501772	0	-	51499942	51501733	789624	8	473,97,97,270,48,279,61,466,	0,5523,5992,6661,7813,8081,8563,9950,
#Partially deleted in new
chr19	51491363	51501789	chr19:51491363-51501789	3	-	51491640	51501733	789624	8	466,97,97,270,48,279,381,483,	0,5516,5985,6654,7806,8074,8556,9943,
#Partially deleted in new
chr19	51491640	51500373	chr19:51491640-51500373	1	-	51491640	51500373	789624	7	189,97,97,270,48,279,454,	0,5239,5708,6377,7529,7797,8279,
#Partially deleted in new
chr19	51505058	51505362	chr19:51505058-51505362	7	-	51505058	51505058	16724991	1	304,	0,
#Deleted in new
chr19	51508572	51509311	chr19:51508572-51509311	7	+	51508572	51508572	16724991	2	295,250,	0,489,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	51519524	51531717	chr19:51519524-51531717	1	-	51520081	51531648	789624	7	731,82,94,258,279,360,136,	0,8222,8635,10199,11156,11635,12057,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	51519729	51531856	chr19:51519729-51531856	1	-	51520205	51531648	789624	6	526,258,48,279,360,275,	0,9994,10707,10951,11430,11852,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	51519729	51531794	chr19:51519729-51531794	1	-	51520224	51531648	789624	7	526,94,258,81,279,360,213,	0,8430,9994,10707,10951,11430,11852,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	51519729	51531803	chr19:51519729-51531803	1	-	51520081	51531648	789624	7	526,82,94,258,279,252,222,	0,8017,8430,9994,10951,11430,11852,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	51519730	51520260	chr19:51519730-51520260	3	+	51519730	51519730	8553170	2	307,123,	0,407,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	51519746	51531803	chr19:51519746-51531803	3	-	51520081	51531648	789624	8	509,82,94,258,48,279,360,222,	0,8000,8413,9977,10690,10934,11413,11835,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	51519965	51528447	chr19:51519965-51528447	0	-	51519965	51519965	8553170	4	290,82,94,79,	0,7781,8194,8403,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	51519998	51531803	chr19:51519998-51531803	1	-	51520205	51531648	789624	6	257,258,48,246,360,222,	0,9725,10438,10682,11161,11583,
#Deleted in new
chr19	51529389	51531803	chr19:51529389-51531803	0	-	51529389	51529389	8553170	5	592,48,279,252,222,	0,1047,1291,1770,2192,
#Deleted in new
chr19	51529518	51531803	chr19:51529518-51531803	0	-	51529518	51529518	8553170	5	463,48,279,360,222,	0,918,1162,1641,2063,
#Deleted in new
chr19	51560121	51560590	chr19:51560121-51560590	7	-	51560121	51560121	16724991	2	82,247,	0,222,
#Deleted in new
chr19	51563796	51564910	chr19:51563796-51564910	7	-	51563796	51563796	16724991	1	1114,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	51571297	51592508	chr19:51571297-51592508	3	+	51573329	51588467	789624	5	178,252,127,96,5882,	0,1852,10093,10489,15329,
#Deleted in new
chr19	51571297	51574210	chr19:51571297-51574210	1	+	51573329	51573485	789624	2	178,1061,	0,1852,
#Partially deleted in new
chr19	51571303	51581546	chr19:51571303-51581546	1	+	51573329	51581531	789624	3	172,252,156,	0,1846,10087,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	51573327	51589738	chr19:51573327-51589738	1	+	51573329	51589591	789624	4	74,127,96,191,	0,8063,8459,16220,
#Partially deleted in new
chr19	51581367	51587362	chr19:51581367-51587362	0	+	51581367	51581367	8553170	3	150,96,736,	0,419,5259,
#Partially deleted in new
chr19	51594560	51601788	chr19:51594560-51601788	7	+	51594560	51594560	16724991	2	86,578,	0,6650,
#Partially deleted in new
chr19	51598545	51601707	chr19:51598545-51601707	5	+	51598545	51598545	16724991	2	432,497,	0,2665,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	51599288	51600470	chr19:51599288-51600470	3	+	51599288	51599288	8553170	1	1182,	0,
#Partially deleted in new
chr19	51601711	51606150	chr19:51601711-51606150	5	+	51601711	51601711	16724991	3	35,280,96,	0,491,4343,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	51611926	51645545	chr19:51611926-51645545	3	-	51612230	51630335	0	10	496,82,100,285,258,39,279,384,368,69,	0,14105,15222,15535,15907,17111,17431,17906,18372,33550,
#Partially deleted in new
chr19	51612090	51646889	chr19:51612090-51646889	3	-	51612230	51646759	8553170	9	332,82,100,285,258,39,279,384,167,	0,13941,15058,15371,15743,16947,17267,17742,34632,
#Partially deleted in new
chr19	51612090	51646800	chr19:51612090-51646800	1	-	51612230	51646759	8553170	9	332,82,100,285,258,39,279,384,78,	0,13941,15058,15371,15743,16947,17267,34166,34632,
#Deleted in new
chr19	51621135	51621701	chr19:51621135-51621701	7	+	51621135	51621135	16724991	1	566,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	51639477	51639931	chr19:51639477-51639931	3	-	51639477	51639477	8553170	1	454,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	51642552	51646801	chr19:51642552-51646801	3	-	51643354	51646759	789624	7	845,136,258,54,279,384,79,	0,984,1226,2924,3229,3704,4170,
#Deleted in new
chr19	51648861	51649610	chr19:51648861-51649610	7	+	51648861	51648861	16724991	1	749,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	51685362	51693456	chr19:51685362-51693456	3	-	51685362	51685362	789624	2	3139,823,	0,7271,
#Deleted in new
chr19	51689127	51694555	chr19:51689127-51694555	0	+	51689215	51694555	789624	2	455,78,	0,5350,
#Deleted in new
chr19	51692611	51692681	chr19:51692611-51692681	3	+	51692611	51692611	5263520	1	70,	0,
#Deleted in new
chr19	51692785	51692864	chr19:51692785-51692864	3	+	51692785	51692785	5263520	1	79,	0,
#Deleted in new
chr19	51693253	51693339	chr19:51693253-51693339	3	+	51693253	51693253	5263520	1	86,	0,
#Partially deleted in new
chr19	51693339	51705190	chr19:51693339-51705190	0	+	51693339	51693339	8553170	8	1216,69,24,78,110,157,139,101,	0,8318,9289,9681,9888,10690,11098,11750,
#Partially deleted in new
chr19	51693343	51705190	chr19:51693343-51705190	0	+	51693343	51693343	789624	8	1212,69,24,78,108,157,211,101,	0,8314,9285,9677,9884,10686,10926,11746,
#Partially deleted in new
chr19	51693495	51705190	chr19:51693495-51705190	3	+	51693526	51705123	789624	9	245,78,69,24,78,110,157,211,101,	0,982,8162,9133,9525,9732,10534,10774,11594,
#Partially deleted in new
chr19	51694209	51701770	chr19:51694209-51701770	0	+	51694209	51694209	8553170	2	346,113,	0,7448,
#Partially deleted in new
chr19	51694331	51702815	chr19:51694331-51702815	0	+	51694331	51694331	8553170	3	224,69,187,	0,7326,8297,
#Partially deleted in new
chr19	51694516	51704206	chr19:51694516-51704206	0	+	51694516	51694516	8553170	6	39,69,24,78,108,177,	0,7141,8112,8504,8711,9513,
#Partially deleted in new
chr19	51702535	51705175	chr19:51702535-51705175	0	+	51702535	51702535	8553170	6	117,78,110,157,211,86,	0,485,692,1494,1734,2554,
#Partially deleted in new
chr19	51702864	51704995	chr19:51702864-51704995	0	+	51702864	51702864	8553170	3	234,108,966,	0,363,1165,
#Partially deleted in new
chr19	51702953	51705349	chr19:51702953-51705349	0	+	51702953	51702953	8553170	4	145,108,451,260,	0,274,1076,2136,
#Partially deleted in new
chr19	51703144	51705190	chr19:51703144-51705190	0	+	51703144	51703144	8553170	4	191,157,211,101,	0,885,1125,1945,
#Deleted in new
chr19	51703998	51705190	chr19:51703998-51705190	0	+	51703998	51703998	8553170	3	188,211,101,	0,271,1091,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	51704320	51712387	chr19:51704320-51712387	0	+	51704320	51704320	8553170	3	160,39,355,	0,769,7712,
#Deleted in new
chr19	51704334	51705189	chr19:51704334-51705189	0	+	51704334	51704334	8553170	2	242,100,	0,755,
#Partially deleted in new
chr19	51713111	51723968	chr19:51713111-51723968	3	-	51713426	51723933	789624	5	991,133,226,693,44,	0,3144,3856,6094,10813,
#Partially deleted in new
chr19	51713111	51723994	chr19:51713111-51723994	1	-	51713426	51723933	789624	5	991,133,226,690,70,	0,3144,3856,6094,10813,
#Partially deleted in new
chr19	51713111	51719941	chr19:51713111-51719941	1	-	51713426	51719928	789624	4	991,133,226,736,	0,3144,3856,6094,
#Partially deleted in new
chr19	51713891	51719469	chr19:51713891-51719469	1	-	51714006	51719469	789624	3	270,226,264,	0,3076,5314,
#Partially deleted in new
chr19	51713891	51719263	chr19:51713891-51719263	0	-	51716251	51719263	789624	4	211,159,226,58,	0,2338,3076,5314,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	51745171	51751909	chr19:51745171-51751909	3	-	51745941	51746994	789624	2	1834,96,	0,6642,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	51745171	51751893	chr19:51745171-51751893	1	-	51745941	51746994	789624	3	1834,51,80,	0,5031,6642,
#Partially deleted in new
chr19	51746419	51750811	chr19:51746419-51750811	0	-	51746419	51746994	789624	2	586,156,	0,4236,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	51746875	51804110	chr19:51746875-51804110	0	-	51746875	51746994	789624	3	130,139,318,	0,30769,56917,
#Partially deleted in new
chr19	51752025	51768923	chr19:51752025-51768923	2	+	51768658	51768923	789624	4	262,144,300,279,	0,8006,8905,16619,
#Partially deleted in new
chr19	51760850	51770526	chr19:51760850-51770526	1	+	51768658	51769714	789624	2	380,1882,	0,7794,
#Partially deleted in new
chr19	51761211	51770013	chr19:51761211-51770013	1	+	51768658	51769714	789624	3	19,156,1369,	0,2150,7433,
#Partially deleted in new
chr19	51762759	51770507	chr19:51762759-51770507	1	+	51768658	51769714	789624	2	758,1863,	0,5885,
#Deleted in new
chr19	51768377	51769032	chr19:51768377-51769032	0	+	51768658	51769032	789624	2	155,388,	0,267,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	51795162	51826189	chr19:51795162-51826189	3	+	51823748	51824810	789624	2	169,2451,	0,28576,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	51804815	51887974	chr19:51804815-51887974	0	-	51844911	51880382	789624	11	439,218,225,93,127,174,96,127,79,199,79,	0,6641,35077,38005,38373,39942,72466,73573,75507,75863,83080,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	51817683	51825808	chr19:51817683-51825808	1	+	51823748	51824810	789624	2	152,2070,	0,6055,
#Deleted in new
chr19	51839770	51840945	chr19:51839770-51840945	3	-	51839770	51839770	8553170	2	109,443,	0,732,
#Deleted in new
chr19	51842877	51843315	chr19:51842877-51843315	7	-	51842877	51842877	16724991	2	36,127,	0,311,
#Partially deleted in new
chr19	51855801	51887980	chr19:51855801-51887980	0	-	51855801	51855801	8553170	6	166,75,96,127,92,85,	0,5102,21480,22587,31019,32094,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	51855803	51871847	chr19:51855803-51871847	0	-	51855803	51855803	8553170	3	164,75,220,	0,5100,15824,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	51855803	51878842	chr19:51855803-51878842	0	-	51855803	51855803	8553170	3	164,75,1561,	0,5100,21478,
#Partially deleted in new
chr19	51855809	51861079	chr19:51855809-51861079	0	-	51855809	51855809	8553170	2	158,176,	0,5094,
#Partially deleted in new
chr19	51855809	51887951	chr19:51855809-51887951	2	-	51855809	51855809	789624	7	158,75,96,127,79,199,1131,	0,5094,21472,22579,24513,24869,31011,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	51860241	51863236	chr19:51860241-51863236	7	-	51860241	51860241	16724991	1	2995,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	51871281	51887951	chr19:51871281-51887951	1	-	51872531	51880382	789624	7	2425,96,127,79,199,92,56,	0,6000,7107,9041,9397,15539,16614,
#Partially deleted in new
chr19	51871998	51887936	chr19:51871998-51887936	1	-	51872531	51880382	789624	6	1531,96,127,79,199,1116,	0,5283,6390,8324,8680,14822,
#Partially deleted in new
chr19	51872456	51887936	chr19:51872456-51887936	1	-	51872531	51880382	789624	7	1073,96,127,79,199,92,105,	0,4825,5932,7866,8222,14364,15375,
#Partially deleted in new
chr19	51872549	51887920	chr19:51872549-51887920	0	-	51872549	51880382	789624	6	1157,96,127,79,199,1100,	0,4732,5839,7773,8129,14271,
#Partially deleted in new
chr19	51878388	51890950	chr19:51878388-51890950	0	-	51878388	51880382	789624	4	127,79,199,118,	0,1934,2290,12444,
#Partially deleted in new
chr19	51878396	51887942	chr19:51878396-51887942	0	-	51878396	51880382	789624	4	119,79,199,47,	0,1926,2282,9499,
#Partially deleted in new
chr19	51878400	51887889	chr19:51878400-51887889	0	-	51878400	51880382	789624	6	115,79,199,30,92,58,	0,1922,2278,7715,8420,9431,
#Partially deleted in new
chr19	51878442	51887976	chr19:51878442-51887976	0	-	51878442	51880382	789624	5	73,67,199,92,81,	0,1880,2236,8378,9453,
#Partially deleted in new
chr19	51880338	51887942	chr19:51880338-51887942	0	-	51880338	51880382	789624	4	63,199,92,99,	0,340,6482,7505,
#Partially deleted in new
chr19	51880678	51887935	chr19:51880678-51887935	0	-	51880678	51880678	8553170	3	199,92,182,	0,6142,7075,
#Partially deleted in new
chr19	51880697	51886465	chr19:51880697-51886465	0	-	51880697	51880697	8553170	2	180,350,	0,5418,
#Partially deleted in new
chr19	51880717	51887891	chr19:51880717-51887891	0	-	51880717	51880717	8553170	3	160,92,304,	0,6103,6870,
#Partially deleted in new
chr19	51888024	51900463	chr19:51888024-51900463	3	+	51888024	51888024	789624	3	102,136,341,	0,8136,12098,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	51889223	51905011	chr19:51889223-51905011	3	-	51890617	51900107	789624	5	2674,96,127,202,98,	0,7248,7628,10869,15690,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	51890053	51905011	chr19:51890053-51905011	1	-	51890617	51900107	789624	6	1345,415,96,127,202,98,	0,1429,6418,6798,10039,14860,
#Partially deleted in new
chr19	51896109	51897219	chr19:51896109-51897219	0	-	51896109	51896109	8553170	2	458,368,	0,742,
#Partially deleted in new
chr19	51896723	51905017	chr19:51896723-51905017	0	-	51896723	51896723	8553170	3	255,202,104,	0,3369,8190,
#Partially deleted in new
chr19	51896851	51905019	chr19:51896851-51905019	0	-	51896851	51899800	789624	3	127,497,106,	0,2946,8062,
#Partially deleted in new
chr19	51896858	51905040	chr19:51896858-51905040	0	-	51896858	51899800	789624	4	120,115,202,127,	0,2939,3234,8055,
#Partially deleted in new
chr19	51914674	51917703	chr19:51914674-51917703	7	-	51914674	51914674	16724991	3	1614,93,127,	0,2196,2902,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	51927146	51936125	chr19:51927146-51936125	0	+	51927146	51927146	8553170	3	394,93,98,	0,2585,8881,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	51927219	51946623	chr19:51927219-51946623	3	+	51936220	51945737	789624	6	321,165,208,127,93,2505,	0,2512,8808,12989,13397,16899,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	51927434	51945752	chr19:51927434-51945752	1	+	51940301	51945737	789624	6	106,100,165,127,93,1634,	0,460,2297,12774,13182,16684,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	51927447	51944246	chr19:51927447-51944246	0	+	51940301	51944246	789624	5	93,165,127,93,128,	0,2284,12761,13169,16671,
#Partially deleted in new
chr19	51927473	51944165	chr19:51927473-51944165	0	+	51936220	51944165	789624	5	67,208,127,93,47,	0,8554,12735,13143,16645,
#Duplicated in new
chr19	51927483	51942820	chr19:51927483-51942820	0	+	51927483	51927483	8553170	5	57,165,127,93,96,	0,2248,12725,13133,15241,
#Partially deleted in new
chr19	51944884	51948759	chr19:51944884-51948759	0	+	51944884	51948685	789624	2	619,167,	0,3708,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	51949133	51976865	chr19:51949133-51976865	1	+	51949133	51949133	8553170	2	102,475,	0,27257,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	51949161	51981367	chr19:51949161-51981367	3	+	51949161	51949161	789624	3	74,183,441,	0,27229,31765,
#Partially deleted in new
chr19	51964342	51986826	chr19:51964342-51986826	3	-	51964853	51974360	789624	5	1872,96,127,186,57,	0,4235,4662,10003,22427,
#Partially deleted in new
chr19	51965855	51986856	chr19:51965855-51986856	0	-	51965855	51969038	789624	5	359,96,141,186,87,	0,2722,3149,8490,20914,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	51967287	51986826	chr19:51967287-51986826	0	-	51967287	51967287	8553170	5	113,96,127,186,57,	0,1290,1717,7058,19482,
#Partially deleted in new
chr19	51968478	51986790	chr19:51968478-51986790	0	-	51968478	51968478	8553170	4	195,127,186,21,	0,526,5867,18291,
#Partially deleted in new
chr19	51968629	51974853	chr19:51968629-51974853	0	-	51968629	51974360	789624	4	44,127,186,176,	0,375,5716,6048,
#Partially deleted in new
chr19	51968658	51986670	chr19:51968658-51986670	0	-	51968658	51974360	789624	4	15,127,186,161,	0,346,5687,17851,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	51972966	51986805	chr19:51972966-51986805	0	-	51972966	51972966	8553170	2	1565,36,	0,13803,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	51981924	51986827	chr19:51981924-51986827	0	-	51981924	51981924	8553170	2	107,58,	0,4845,
#Partially deleted in new
chr19	51991331	52008081	chr19:51991331-52008081	1	-	51992879	52003711	789624	6	3506,96,127,204,38,123,	0,10481,10823,12365,15961,16627,
#Partially deleted in new
chr19	51991333	52008196	chr19:51991333-52008196	1	-	51992879	52003711	789624	6	3504,33,96,127,204,56,	0,9012,10479,10821,12363,16807,
#Partially deleted in new
chr19	51991337	52008215	chr19:51991337-52008215	0	-	52000319	52003711	789624	6	3500,120,96,127,204,75,	0,8921,10475,10817,12359,16803,
#Partially deleted in new
chr19	51991344	52008230	chr19:51991344-52008230	3	-	51992879	52003711	789624	6	3493,96,127,204,38,90,	0,10468,10810,12352,15948,16796,
#Partially deleted in new
chr19	51992452	52008230	chr19:51992452-52008230	1	-	51992879	52008170	789624	4	2385,96,127,90,	0,9360,9702,15688,
#Partially deleted in new
chr19	51992743	52008202	chr19:51992743-52008202	1	-	51992879	52003711	789624	7	2094,33,96,127,204,38,62,	0,7602,9069,9411,10953,14549,15397,
#Partially deleted in new
chr19	51992856	52003749	chr19:51992856-52003749	1	-	51992879	52003711	789624	6	1982,15,9,98,127,53,	0,8924,8940,8954,9298,10840,
#Partially deleted in new
chr19	51992879	52003711	chr19:51992879-52003711	1	-	51992879	52003711	789624	5	1958,33,96,127,15,	0,7466,8933,9275,10817,
#Partially deleted in new
chr19	51994614	52008200	chr19:51994614-52008200	0	-	51994614	52007295	789624	6	223,33,96,127,38,60,	0,5731,7198,7540,12678,13526,
#Partially deleted in new
chr19	51994706	52008201	chr19:51994706-52008201	0	-	52000319	52008170	789624	5	131,120,96,127,61,	0,5552,7106,7448,13434,
#Partially deleted in new
chr19	51994807	52008223	chr19:51994807-52008223	0	-	51994807	52003711	789624	6	30,21,96,127,204,83,	0,5550,7005,7347,8889,13333,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52000124	52008163	chr19:52000124-52008163	1	-	52000319	52003711	789624	5	254,96,127,204,23,	0,1688,2030,3572,8016,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	52002272	52008201	chr19:52002272-52008201	0	-	52002272	52003711	789624	4	9,204,307,61,	0,1424,2144,5868,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	52003781	52008217	chr19:52003781-52008217	0	-	52003781	52003781	8553170	4	119,307,38,77,	0,635,3511,4359,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	52003848	52008201	chr19:52003848-52008201	0	-	52003848	52003848	8553170	4	52,433,38,61,	0,568,3444,4292,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	52012764	52028349	chr19:52012764-52028349	1	-	52013136	52025745	789624	6	488,243,96,127,231,108,	0,4352,5243,5603,12966,15477,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52013324	52028570	chr19:52013324-52028570	3	-	52015839	52025745	789624	5	4035,96,127,231,329,	0,4683,5043,12406,14917,
#Partially deleted in new
chr19	52018392	52030240	chr19:52018392-52030240	0	-	52018392	52025745	789624	3	102,231,385,	0,7338,11463,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52031378	52048561	chr19:52031378-52048561	3	-	52033719	52046868	789624	5	4062,96,127,207,21,	0,9109,10101,15475,17162,
#Partially deleted in new
chr19	52033419	52048820	chr19:52033419-52048820	1	-	52033719	52046868	789624	5	2021,96,127,207,126,	0,7068,8060,13434,15275,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52035141	52064528	chr19:52035141-52064528	0	-	52035141	52046868	789624	5	299,96,127,207,35,	0,5346,6338,11712,29352,
#Partially deleted in new
chr19	52035306	52048640	chr19:52035306-52048640	0	-	52035306	52046868	789624	5	134,96,127,207,32,	0,5181,6173,11547,13302,
#Partially deleted in new
chr19	52040363	52048764	chr19:52040363-52048764	1	-	52040479	52046868	789624	4	220,127,207,70,	0,1116,6490,8331,
#Partially deleted in new
chr19	52041513	52047364	chr19:52041513-52047364	0	-	52041513	52046868	789624	2	93,511,	0,5340,
#Partially deleted in new
chr19	52048809	52095738	chr19:52048809-52095738	0	-	52048809	52048809	8553170	2	698,164,	0,46765,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	52049006	52049754	chr19:52049006-52049754	3	+	52049006	52049006	8553170	1	748,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52058489	52063703	chr19:52058489-52063703	3	-	52058489	52058489	8553170	2	618,57,	0,5157,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	52064465	52084888	chr19:52064465-52084888	1	-	52065106	52084801	789624	4	3145,129,127,102,	0,11578,12492,20321,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52064465	52095765	chr19:52064465-52095765	1	-	52065106	52067533	789624	5	3145,92,66,126,191,	0,20321,24471,29380,31109,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	52064465	52094105	chr19:52064465-52094105	3	-	52065106	52084801	789624	6	3145,129,127,92,66,260,	0,11578,12492,20321,24471,29380,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52064617	52067568	chr19:52064617-52067568	0	-	52065106	52067568	789624	2	948,1079,	0,1872,
#Partially deleted in new
chr19	52067498	52076389	chr19:52067498-52076389	0	-	52067498	52067498	8553170	2	112,346,	0,8545,
#Deleted in new
chr19	52110317	52110726	chr19:52110317-52110726	7	-	52110317	52110317	16724991	1	409,	0,
#Partially deleted in new
chr19	52113090	52139917	chr19:52113090-52139917	3	-	52114817	52130512	789624	4	3934,127,88,186,	0,10832,17410,26641,
#Partially deleted in new
chr19	52123943	52138825	chr19:52123943-52138825	0	-	52123943	52130512	789624	3	106,88,362,	0,6557,14520,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52130547	52171469	chr19:52130547-52171469	2	-	52130547	52130547	8553170	5	41,127,95,138,134,	0,29917,37510,39100,40788,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52130563	52171533	chr19:52130563-52171533	1	-	52130563	52130563	8553170	5	25,127,95,134,198,	0,29901,37494,39084,40772,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52142625	52144156	chr19:52142625-52144156	3	+	52142625	52142625	8553170	2	92,240,	0,1291,
#Partially deleted in new
chr19	52143042	52143336	chr19:52143042-52143336	7	+	52143042	52143042	16724991	1	294,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52153863	52154964	chr19:52153863-52154964	0	-	52154871	52154964	789624	2	269,343,	0,758,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52154847	52171491	chr19:52154847-52171491	3	-	52154871	52168072	789624	5	2693,127,95,134,160,	0,5617,13210,14800,16484,
#Partially deleted in new
chr19	52154871	52160648	chr19:52154871-52160648	1	-	52154871	52160648	789624	3	2669,132,10,	0,5593,5767,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52157365	52170386	chr19:52157365-52170386	0	-	52157365	52168072	789624	5	175,127,95,134,27,	0,3099,10692,12282,12994,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	52160320	52171643	chr19:52160320-52171643	1	-	52160339	52168072	789624	4	271,95,134,308,	0,7737,9327,11015,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	52165183	52169734	chr19:52165183-52169734	0	-	52165183	52165183	8553170	3	202,95,87,	0,2874,4464,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52171157	52177002	chr19:52171157-52177002	3	+	52171157	52171157	8553170	2	46,532,	0,5313,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	52190038	52229533	chr19:52190038-52229533	3	+	52190096	52225981	0	15	136,91,101,233,148,156,115,71,135,174,61,155,143,92,3569,	0,11905,15924,21221,22647,22916,25740,25965,26490,29652,30150,30940,32060,35678,35926,
#Partially deleted in new
chr19	52190047	52211483	chr19:52190047-52211483	0	+	52190096	52200312	789624	5	127,125,91,101,224,	0,10226,11896,15915,21212,
#Partially deleted in new
chr19	52190050	52216602	chr19:52190050-52216602	0	+	52190096	52216602	789624	9	244,91,101,233,148,156,115,71,74,	0,11893,15912,21209,22635,22904,25728,25953,26478,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52190090	52191404	chr19:52190090-52191404	1	+	52190096	52191167	789624	2	84,360,	0,954,
#Partially deleted in new
chr19	52190096	52200312	chr19:52190096-52200312	1	+	52190096	52200312	789624	2	78,39,	0,10177,
#Partially deleted in new
chr19	52190113	52211694	chr19:52190113-52211694	0	+	52190113	52190113	8553170	4	61,91,101,435,	0,11830,15849,21146,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	52201092	52226417	chr19:52201092-52226417	1	+	52212719	52225981	789624	15	602,91,101,233,148,156,115,71,135,174,61,155,143,92,453,	0,851,4870,10167,11593,11862,14686,14911,15436,18598,19096,19886,21006,24624,24872,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	52201180	52211296	chr19:52201180-52211296	0	+	52201180	52201180	8553170	4	333,91,101,37,	0,763,4782,10079,
#Partially deleted in new
chr19	52201766	52212698	chr19:52201766-52212698	0	+	52201766	52201766	8553170	4	268,101,233,13,	0,4196,9493,10919,
#Partially deleted in new
chr19	52212491	52215841	chr19:52212491-52215841	0	+	52212491	52212491	8553170	3	342,156,63,	0,463,3287,
#Partially deleted in new
chr19	52212829	52219734	chr19:52212829-52219734	0	+	52212829	52212829	8553170	5	281,115,71,135,44,	0,2949,3174,3699,6861,
#Partially deleted in new
chr19	52220982	52226401	chr19:52220982-52226401	0	+	52220982	52225819	789624	3	151,143,685,	0,1116,4734,
#Deleted in new
chr19	52222019	52222098	chr19:52222019-52222098	3	+	52222019	52222019	5263520	1	79,	0,
#Partially deleted in new
chr19	52222224	52231287	chr19:52222224-52231287	3	-	52222224	52222224	8553170	3	175,155,221,	0,6230,8842,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52228242	52231294	chr19:52228242-52231294	1	-	52228242	52228242	8553170	2	367,228,	0,2824,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52229207	52231289	chr19:52229207-52231289	1	-	52229207	52229207	8553170	2	351,223,	0,1859,
#Deleted in new
chr19	52241764	52242440	chr19:52241764-52242440	7	-	52241764	52241764	16724991	1	676,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	52259075	52259187	chr19:52259075-52259187	3	-	52259075	52259075	8553170	1	112,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	52269570	52296046	chr19:52269570-52296046	3	+	52269613	52291198	789624	4	61,127,129,5981,	0,12540,13714,20495,
#Partially deleted in new
chr19	52269586	52290445	chr19:52269586-52290445	0	+	52283316	52290445	789624	3	45,129,380,	0,13698,20479,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52269592	52291761	chr19:52269592-52291761	1	+	52269613	52288085	789624	5	39,127,129,74,1696,	0,12518,13692,18449,20473,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	52269592	52283318	chr19:52269592-52283318	0	+	52277478	52283318	789624	4	39,388,127,34,	0,7561,12518,13692,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	52274461	52292724	chr19:52274461-52292724	1	+	52277478	52292186	789624	6	52,388,127,129,1059,576,	0,2692,7649,8823,15604,17687,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	52274461	52290153	chr19:52274461-52290153	0	+	52282203	52290153	789624	4	208,127,129,88,	0,7649,8823,15604,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52274474	52282574	chr19:52274474-52282574	0	+	52274474	52274474	8553170	2	108,464,	0,7636,
#Partially deleted in new
chr19	52281796	52281893	chr19:52281796-52281893	3	+	52281796	52281796	5263520	1	97,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52284779	52297920	chr19:52284779-52297920	3	-	52284779	52284779	8553170	2	297,150,	0,12991,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	52297176	52325919	chr19:52297176-52325919	0	+	52300412	52322858	789624	6	47,91,127,129,2096,37,	0,3217,16976,18657,24402,28706,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52297176	52325922	chr19:52297176-52325922	3	+	52300412	52322858	789624	5	47,91,127,129,4344,	0,3217,16976,18657,24402,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	52297178	52323158	chr19:52297178-52323158	1	+	52300412	52322858	789624	4	45,91,127,1580,	0,3215,16974,24400,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	52297178	52323680	chr19:52297178-52323680	1	+	52300412	52321692	789624	3	45,91,2102,	0,3215,24400,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	52300393	52324080	chr19:52300393-52324080	1	+	52315865	52322858	789624	3	91,129,2502,	0,15440,21185,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	52300692	52345229	chr19:52300692-52345229	3	-	52300692	52300692	8553170	7	1183,150,153,87,72,61,199,	0,1288,6699,7974,25131,29637,44338,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	52336244	52367122	chr19:52336244-52367122	3	+	52349172	52366767	789624	6	262,125,82,127,129,1425,	0,11462,12909,17437,18006,29453,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52336303	52348049	chr19:52336303-52348049	0	+	52336303	52336303	8553170	2	203,343,	0,11403,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	52336307	52367113	chr19:52336307-52367113	1	+	52349172	52366767	789624	6	199,238,82,127,129,1416,	0,11399,12846,17374,17943,29390,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52336311	52367778	chr19:52336311-52367778	1	+	52349172	52366767	789624	5	195,238,82,127,2081,	0,11395,12842,17370,29386,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52344077	52354315	chr19:52344077-52354315	0	+	52349172	52354315	789624	5	69,238,82,127,65,	0,3629,5076,9604,10173,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	52345428	52366858	chr19:52345428-52366858	1	+	52349172	52366767	789624	6	118,238,82,127,129,1161,	0,2278,3725,8253,8822,20269,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	52349144	52367122	chr19:52349144-52367122	1	+	52349172	52366767	789624	3	91,127,1425,	0,4537,16553,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	52349144	52367122	chr19:52349144-52367122	1	+	52349172	52366767	789624	4	91,127,129,1425,	0,4537,5106,16553,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52369916	52383969	chr19:52369916-52383969	1	+	52369965	52379530	789624	5	61,127,129,120,121,	0,3194,4382,9504,13932,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	52369935	52380075	chr19:52369935-52380075	1	+	52369965	52379530	789624	4	42,127,129,655,	0,3175,4363,9485,
#Partially deleted in new
chr19	52369938	52374717	chr19:52369938-52374717	1	+	52369965	52374545	789624	4	39,127,96,234,	0,3172,4360,4545,
#Partially deleted in new
chr19	52369945	52374630	chr19:52369945-52374630	1	+	52369965	52374513	789624	3	32,127,332,	0,3165,4353,
#Partially deleted in new
chr19	52369950	52385795	chr19:52369950-52385795	3	+	52369965	52385314	789624	4	27,127,129,1947,	0,3160,4348,13898,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52370092	52373151	chr19:52370092-52373151	0	+	52370092	52370092	8553170	2	510,41,	0,3018,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	52388841	52391573	chr19:52388841-52391573	0	-	52388841	52388841	8553170	1	2732,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	52389018	52397757	chr19:52389018-52397757	3	-	52389018	52389018	789624	6	285,57,153,135,143,296,	0,5772,6579,7346,7591,8443,
#Deleted in new
chr19	52392658	52392755	chr19:52392658-52392755	7	+	52392658	52392658	16724991	1	97,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52396638	52397669	chr19:52396638-52397669	0	-	52396638	52396638	8553170	2	629,208,	0,823,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	52397848	52418403	chr19:52397848-52418403	3	+	52405921	52414334	789624	8	56,253,82,117,127,129,165,3280,	0,518,4098,4580,8058,8666,16355,17275,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	52397867	52418404	chr19:52397867-52418404	1	+	52402013	52416739	789624	7	37,253,69,82,127,129,3281,	0,499,3817,4079,8039,8647,17256,
#Partially deleted in new
chr19	52397867	52406615	chr19:52397867-52406615	0	+	52402013	52406615	789624	6	37,166,69,82,127,101,	0,586,3817,4079,8039,8647,
#Partially deleted in new
chr19	52397867	52405934	chr19:52397867-52405934	0	+	52402013	52405934	789624	5	33,253,69,82,28,	0,499,3817,4079,8039,
#Partially deleted in new
chr19	52397899	52402017	chr19:52397899-52402017	0	+	52397899	52397899	8553170	4	121,253,69,71,	0,467,3785,4047,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	52401946	52408512	chr19:52401946-52408512	1	+	52402013	52408230	789624	4	82,127,129,287,	0,3960,4568,6279,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	52401993	52406896	chr19:52401993-52406896	1	+	52402013	52406693	789624	3	35,127,382,	0,3913,4521,
#Partially deleted in new
chr19	52405983	52415344	chr19:52405983-52415344	0	+	52405983	52415015	789624	4	50,129,101,221,	0,531,8955,9140,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	52411371	52415353	chr19:52411371-52415353	0	+	52411371	52411371	8553170	3	2997,101,230,	0,3567,3752,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	52413603	52418412	chr19:52413603-52418412	0	+	52413603	52413603	8553170	1	4809,	0,
#Partially deleted in new
chr19	52425862	52426202	chr19:52425862-52426202	7	-	52425862	52425862	16724991	1	340,	0,
#Partially deleted in new
chr19	52429186	52452315	chr19:52429186-52452315	1	+	52431474	52451497	789624	5	58,82,127,129,1129,	0,2221,4768,5894,22000,
#Partially deleted in new
chr19	52431413	52439446	chr19:52431413-52439446	3	+	52431474	52439446	789624	4	76,166,129,1715,	0,2541,3667,6318,
#Partially deleted in new
chr19	52431413	52451939	chr19:52431413-52451939	1	+	52431474	52451497	789624	3	76,127,753,	0,2541,19773,
#Partially deleted in new
chr19	52431413	52439446	chr19:52431413-52439446	1	+	52431474	52439446	789624	4	76,127,129,1715,	0,2541,3667,6318,
#Partially deleted in new
chr19	52431413	52451939	chr19:52431413-52451939	1	+	52431474	52451497	789624	4	76,127,129,753,	0,2541,3667,19773,
#Partially deleted in new
chr19	52453575	52512154	chr19:52453575-52512154	3	+	52501845	52512154	789624	6	32,91,102,82,127,1583,	0,3292,37748,48251,51079,56996,
#Partially deleted in new
chr19	52453579	52458507	chr19:52453579-52458507	0	+	52453579	52453579	8553170	3	28,91,621,	0,3288,4307,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	52453581	52458836	chr19:52453581-52458836	0	+	52453581	52453581	8553170	1	5255,	0,
#Partially deleted in new
chr19	52453593	52458286	chr19:52453593-52458286	0	+	52453593	52453593	8553170	3	14,91,367,	0,3274,4326,
#Partially deleted in new
chr19	52453612	52458154	chr19:52453612-52458154	0	+	52453612	52453612	8553170	4	105,60,91,235,	0,3064,3255,4307,
#Partially deleted in new
chr19	52473335	52475239	chr19:52473335-52475239	7	-	52473335	52473335	16724991	1	1904,	0,
#Partially deleted in new
chr19	52492829	52511142	chr19:52492829-52511142	0	+	52501845	52511142	789624	4	34,82,127,571,	0,8997,11825,17742,
#Partially deleted in new
chr19	52511281	52512342	chr19:52511281-52512342	3	-	52511281	52511281	8553170	2	712,168,	0,893,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	52527651	52564464	chr19:52527651-52564464	0	+	52553123	52555628	789624	4	60,82,2944,1147,	0,15614,25455,35666,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52527652	52556336	chr19:52527652-52556336	3	+	52543284	52555628	789624	5	59,102,82,127,3230,	0,5255,15613,19859,25454,
#Partially deleted in new
chr19	52527662	52553456	chr19:52527662-52553456	0	+	52543284	52553456	789624	4	49,82,127,350,	0,15603,19849,25444,
#Partially deleted in new
chr19	52527667	52553431	chr19:52527667-52553431	0	+	52553123	52553431	789624	4	44,102,82,325,	0,5240,15598,25439,
#Partially deleted in new
chr19	52527708	52553166	chr19:52527708-52553166	0	+	52543284	52553166	789624	5	201,102,82,127,60,	0,5199,15557,19803,25398,
#Partially deleted in new
chr19	52535984	52553436	chr19:52535984-52553436	0	+	52543284	52553436	789624	4	62,82,127,330,	0,7281,11527,17122,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52555456	52556760	chr19:52555456-52556760	1	+	52555800	52556031	789624	2	71,1065,	0,239,
#Partially deleted in new
chr19	52555821	52574130	chr19:52555821-52574130	0	+	52555821	52555821	8553170	3	229,291,54,	0,14218,18255,
#Deleted in new
chr19	52564075	52564231	chr19:52564075-52564231	7	+	52564075	52564075	16724991	1	156,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	52570274	52584566	chr19:52570274-52584566	3	+	52574147	52583457	789624	4	56,86,127,2365,	0,3802,5620,11927,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52570300	52584436	chr19:52570300-52584436	1	+	52572241	52583457	789624	5	30,132,86,127,2235,	0,1936,3776,5594,11901,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52570663	52587174	chr19:52570663-52587174	1	+	52572241	52583457	789624	5	223,129,86,127,4973,	0,1576,3413,5231,11538,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52570663	52582499	chr19:52570663-52582499	0	+	52572241	52582499	789624	5	223,129,86,127,298,	0,1576,3413,5231,11538,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52575882	52585561	chr19:52575882-52585561	3	-	52575882	52575882	8553170	2	108,532,	0,9147,
#Partially deleted in new
chr19	52588504	52595688	chr19:52588504-52595688	7	+	52588504	52588504	16724991	3	109,127,72,	0,3597,7112,
#Partially deleted in new
chr19	52592037	52597345	chr19:52592037-52597345	5	+	52592037	52592037	16724991	2	191,1729,	0,3579,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	52594059	52660844	chr19:52594059-52660844	1	-	52594208	52635080	789624	6	245,140,127,88,127,83,	0,20598,24876,41006,61501,66702,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	52594150	52690496	chr19:52594150-52690496	1	-	52594230	52635080	789624	7	154,127,88,127,82,72,54,	0,24785,40915,61410,66611,80031,96292,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52597698	52598887	chr19:52597698-52598887	3	-	52597698	52597698	8553170	2	405,239,	0,950,
#Partially deleted in new
chr19	52612366	52638391	chr19:52612366-52638391	1	-	52613013	52614564	789624	3	2431,88,80,	0,22699,25945,
#Partially deleted in new
chr19	52612366	52638391	chr19:52612366-52638391	3	-	52613013	52614564	789624	4	2431,127,88,80,	0,6569,22699,25945,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52612376	52637086	chr19:52612376-52637086	1	-	52613013	52614564	789624	2	2421,2021,	0,22689,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52612377	52618040	chr19:52612377-52618040	1	-	52613013	52614564	789624	2	2420,1323,	0,4340,
#Partially deleted in new
chr19	52612377	52638385	chr19:52612377-52638385	1	-	52613013	52614564	789624	3	2420,139,74,	0,22688,25934,
#Partially deleted in new
chr19	52612377	52690488	chr19:52612377-52690488	1	-	52614621	52635080	789624	6	2420,127,88,127,82,46,	0,6558,22688,43183,48384,78065,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52614664	52638365	chr19:52614664-52638365	1	-	52614719	52635080	789624	5	133,158,127,88,54,	0,2053,4271,20401,23647,
#Partially deleted in new
chr19	52614688	52690486	chr19:52614688-52690486	1	-	52614719	52635080	789624	6	109,88,127,82,72,44,	0,20377,40872,46073,59493,75754,
#Partially deleted in new
chr19	52617291	52690496	chr19:52617291-52690496	0	-	52617291	52617291	8553170	6	100,127,88,127,82,54,	0,1644,17774,38269,43470,73151,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	52618499	52638388	chr19:52618499-52638388	0	-	52618499	52618499	8553170	3	563,88,77,	0,16566,19812,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	52618674	52690488	chr19:52618674-52690488	0	-	52618674	52618674	8553170	6	91,127,88,127,82,46,	0,261,16391,36886,42087,71768,
#Partially deleted in new
chr19	52618711	52690496	chr19:52618711-52690496	0	-	52618711	52618711	8553170	4	351,88,82,54,	0,16354,42050,71731,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	52650436	52653284	chr19:52650436-52653284	3	-	52650436	52650436	8553170	1	2848,	0,
#Partially deleted in new
chr19	52654070	52690496	chr19:52654070-52690496	0	-	52654070	52654070	8553170	4	333,127,82,54,	0,1490,6691,36372,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	52654864	52690474	chr19:52654864-52690474	0	-	52654864	52654864	8553170	3	823,82,32,	0,5897,35578,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52702812	52735044	chr19:52702812-52735044	1	-	52704936	52706847	789624	5	4052,82,102,100,44,	0,13019,25917,27093,32188,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52702812	52735054	chr19:52702812-52735054	1	-	52704936	52715894	789624	5	4052,127,82,102,54,	0,11202,13019,25917,32188,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	52702812	52735054	chr19:52702812-52735054	3	-	52704936	52715894	789624	6	4052,127,82,102,100,54,	0,11202,13019,25917,27093,32188,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	52702812	52735038	chr19:52702812-52735038	0	-	52711299	52715894	789624	9	4052,74,98,127,82,123,102,100,38,	0,4656,8394,11202,13019,13298,25917,27093,32188,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52703609	52735044	chr19:52703609-52735044	1	-	52704936	52706847	789624	2	3255,44,	0,31391,
#Partially deleted in new
chr19	52704218	52729882	chr19:52704218-52729882	1	-	52704936	52715894	789624	7	2646,127,82,123,102,21,52,	0,9796,11613,11892,24511,24705,25612,
#Partially deleted in new
chr19	52704731	52728786	chr19:52704731-52728786	1	-	52704936	52706847	789624	4	2133,82,123,57,	0,11100,11379,23998,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52704731	52728786	chr19:52704731-52728786	0	-	52707458	52715894	789624	5	2133,147,127,82,57,	0,2660,9283,11100,23998,
#Partially deleted in new
chr19	52706459	52735044	chr19:52706459-52735044	0	-	52706459	52706847	789624	3	405,82,44,	0,9372,28541,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52706610	52735048	chr19:52706610-52735048	1	-	52706773	52715894	789624	5	254,74,82,102,48,	0,858,9221,22119,28390,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	52706621	52735034	chr19:52706621-52735034	0	-	52708273	52715894	789624	6	243,150,127,82,102,34,	0,1555,7393,9210,22108,28379,
#Partially deleted in new
chr19	52706709	52735011	chr19:52706709-52735011	0	-	52706709	52715894	789624	6	155,127,82,102,100,11,	0,7305,9122,22020,23196,28291,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	52706776	52735044	chr19:52706776-52735044	1	-	52707458	52715894	789624	6	88,122,82,102,100,44,	0,644,9055,21953,23129,28224,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52708203	52708831	chr19:52708203-52708831	0	-	52708203	52708203	8553170	2	126,411,	0,217,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	52720908	52735038	chr19:52720908-52735038	0	-	52720908	52720908	8553170	3	355,102,38,	0,7821,14092,
#Partially deleted in new
chr19	52721182	52735015	chr19:52721182-52735015	0	-	52721182	52721182	8553170	4	85,102,100,15,	0,7547,8723,13818,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	52723420	52724664	chr19:52723420-52724664	0	-	52723420	52723420	8553170	1	1244,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	52749941	52786742	chr19:52749941-52786742	0	-	52760451	52778888	8553170	9	1829,153,88,82,330,127,82,148,148,	0,5009,10435,13206,17501,24633,28884,31375,36653,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	52750109	52786761	chr19:52750109-52786761	0	-	52755078	52778888	8553170	7	1661,153,88,330,127,82,167,	0,4841,10267,17333,24465,28716,36485,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	52764194	52786763	chr19:52764194-52786763	1	-	52765586	52767755	789624	3	3578,82,169,	0,14631,22400,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	52764549	52786807	chr19:52764549-52786807	3	-	52765586	52778888	789624	4	3223,127,82,213,	0,10025,14276,22045,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52780652	52786791	chr19:52780652-52786791	0	-	52780652	52780652	8553170	2	403,197,	0,5942,
#Partially deleted in new
chr19	52780827	52786724	chr19:52780827-52786724	0	-	52780827	52780827	8553170	3	228,148,130,	0,489,5767,
#Partially deleted in new
chr19	52780828	52786700	chr19:52780828-52786700	0	-	52780828	52780828	8553170	2	227,106,	0,5766,
#Partially deleted in new
chr19	52780991	52786771	chr19:52780991-52786771	0	-	52780991	52780991	8553170	2	473,177,	0,5603,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52797408	52806021	chr19:52797408-52806021	1	-	52799687	52801685	789624	2	4294,877,	0,7736,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	52797408	52821632	chr19:52797408-52821632	3	-	52799687	52817958	789624	4	4294,127,88,47,	0,10598,20535,24177,
#Partially deleted in new
chr19	52800047	52821669	chr19:52800047-52821669	0	-	52800047	52801685	789624	3	1655,88,84,	0,17896,21538,
#Partially deleted in new
chr19	52807875	52821633	chr19:52807875-52821633	0	-	52807875	52807875	8553170	3	258,88,48,	0,10068,13710,
#Deleted in new
chr19	52809823	52810708	chr19:52809823-52810708	7	+	52809823	52809823	16724991	1	885,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52814283	52818028	chr19:52814283-52818028	0	-	52814283	52814283	8553170	2	143,85,	0,3660,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	52838007	52857619	chr19:52838007-52857619	3	-	52840724	52854272	789624	4	4144,127,88,48,	0,11079,16250,19564,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52838535	52857649	chr19:52838535-52857649	1	-	52842027	52854272	789624	5	3616,118,127,88,78,	0,6643,10551,15722,19036,
#Partially deleted in new
chr19	52841935	52857619	chr19:52841935-52857619	0	-	52841935	52854272	789624	5	216,54,127,88,48,	0,4622,7151,12322,15636,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	52842027	52849525	chr19:52842027-52849525	1	-	52842027	52849525	789624	4	124,118,132,10,	0,3151,7059,7488,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52845194	52849630	chr19:52845194-52849630	0	-	52845194	52849120	789624	2	102,544,	0,3892,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52845224	52857619	chr19:52845224-52857619	0	-	52853888	52854272	789624	5	72,127,236,88,48,	0,3862,8647,9033,12347,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52845236	52857619	chr19:52845236-52857619	0	-	52853888	52854026	789624	5	60,127,255,88,48,	0,3850,8635,9021,12335,
#Partially deleted in new
chr19	52861806	52864151	chr19:52861806-52864151	7	-	52861806	52861806	16724991	2	1060,112,	0,2233,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	52863789	52874237	chr19:52863789-52874237	0	-	52863789	52863789	8553170	3	370,81,80,	0,10202,10368,
#Partially deleted in new
chr19	52863865	52897693	chr19:52863865-52897693	0	-	52863865	52863865	8553170	6	294,81,127,88,118,46,	0,10126,24261,26375,27363,33782,
#Partially deleted in new
chr19	52865368	52865429	chr19:52865368-52865429	7	-	52865368	52865368	16724991	1	61,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	52876171	52890375	chr19:52876171-52890375	1	-	52880595	52890255	789624	3	5812,127,135,	0,11955,14069,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52876177	52895156	chr19:52876177-52895156	0	-	52876177	52876177	8553170	2	408,312,	0,18667,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	52876179	52897560	chr19:52876179-52897560	3	-	52880595	52890255	789624	8	5804,127,88,118,78,95,97,41,	0,11947,14061,15049,17599,17946,19159,21340,
#Partially deleted in new
chr19	52881616	52891346	chr19:52881616-52891346	0	-	52881616	52890255	789624	4	325,127,88,118,	0,6510,8624,9612,
#Partially deleted in new
chr19	52881755	52897684	chr19:52881755-52897684	0	-	52881755	52890255	789624	5	228,127,88,118,37,	0,6371,8485,9473,15892,
#Partially deleted in new
chr19	52881867	52897650	chr19:52881867-52897650	0	-	52881867	52890255	789624	5	116,127,88,118,141,	0,6259,8373,9361,15642,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52881953	52892288	chr19:52881953-52892288	0	-	52881953	52890255	789624	5	30,127,88,118,220,	0,6173,8287,9275,10115,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52888191	52897654	chr19:52888191-52897654	0	-	52888191	52890255	789624	5	62,88,118,149,135,	0,2049,3037,5587,9328,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52895390	52897635	chr19:52895390-52897635	0	-	52895390	52895390	8553170	2	392,116,	0,2129,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52904416	52923481	chr19:52904416-52923481	3	-	52906164	52917873	789624	5	3763,127,73,119,113,	0,10779,13442,14402,18952,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	52908168	52923470	chr19:52908168-52923470	0	-	52908168	52908168	8553170	5	11,127,183,139,102,	0,7027,9053,9690,15200,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	52927134	52942601	chr19:52927134-52942601	7	-	52927134	52927134	16724991	2	2280,61,	0,15406,
#Partially deleted in new
chr19	52928474	52962823	chr19:52928474-52962823	3	-	52928902	52956089	789624	4	940,127,78,107,	0,24276,27552,34242,
#Partially deleted in new
chr19	52928902	52929397	chr19:52928902-52929397	5	-	52928902	52928902	16724991	1	495,	0,
#Partially deleted in new
chr19	52949441	52962882	chr19:52949441-52962882	1	-	52949818	52956089	789624	4	2143,127,78,156,	0,3309,6585,13285,
#Partially deleted in new
chr19	52951335	52962851	chr19:52951335-52962851	1	-	52951580	52956089	789624	4	249,110,78,125,	0,1415,4691,11391,
#Partially deleted in new
chr19	52951431	52962911	chr19:52951431-52962911	0	-	52951431	52956089	789624	4	153,127,78,195,	0,1319,4595,11285,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	52951750	52962871	chr19:52951750-52962871	1	-	52951850	52956089	789624	4	141,127,78,145,	0,1000,4276,10976,
#Partially deleted in new
chr19	52952518	52962871	chr19:52952518-52962871	1	-	52952646	52956089	789624	3	359,78,145,	0,3508,10208,
#Partially deleted in new
chr19	52952588	52962878	chr19:52952588-52962878	1	-	52952646	52956089	789624	3	289,78,162,	0,3438,10128,
#Partially deleted in new
chr19	52956040	52981654	chr19:52956040-52981654	3	-	52956040	52956040	8553170	4	64,219,137,133,	0,14583,24795,25481,
#Partially deleted in new
chr19	52968909	52970875	chr19:52968909-52970875	5	-	52968909	52968909	16724991	1	1966,	0,
#Partially deleted in new
chr19	52970382	52981544	chr19:52970382-52981544	4	-	52970382	52970382	16724991	3	460,81,23,	0,10509,11139,
#Deleted in new
chr19	53004039	53005150	chr19:53004039-53005150	7	+	53004039	53004039	16724991	1	1111,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	53007511	53013180	chr19:53007511-53013180	3	+	53007511	53007511	8553170	2	226,3834,	0,1835,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	53013920	53016122	chr19:53013920-53016122	3	+	53014090	53015524	789624	1	2202,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	53044737	53051076	chr19:53044737-53051076	3	+	53049251	53050859	789624	2	221,2210,	0,4129,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	53066605	53103351	chr19:53066605-53103351	1	-	53068076	53086276	789624	7	3657,129,127,60,85,84,87,	0,7534,8451,19656,24807,25031,36659,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	53066613	53103434	chr19:53066613-53103434	1	-	53068076	53086276	789624	6	3649,129,127,60,84,170,	0,7526,8443,19648,25023,36651,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	53066613	53103434	chr19:53066613-53103434	3	-	53068076	53086276	789624	7	3649,129,127,60,117,84,170,	0,7526,8443,19648,24799,25023,36651,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	53066614	53075967	chr19:53066614-53075967	1	-	53068076	53075090	789624	3	3648,129,911,	0,7525,8442,
#Partially deleted in new
chr19	53068865	53103393	chr19:53068865-53103393	0	-	53068865	53086276	789624	6	1397,129,127,60,84,129,	0,5274,6191,17396,22771,34399,
#Partially deleted in new
chr19	53070072	53085384	chr19:53070072-53085384	0	-	53070072	53075090	789624	4	190,129,127,222,	0,4067,4984,15090,
#Partially deleted in new
chr19	53072885	53103403	chr19:53072885-53103403	1	-	53073336	53086276	789624	7	624,129,127,60,141,84,139,	0,1254,2171,13376,18527,18751,30379,
#Partially deleted in new
chr19	53075158	53103436	chr19:53075158-53103436	0	-	53075158	53086276	789624	4	25,60,308,172,	0,11103,16254,28106,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	53076912	53085395	chr19:53076912-53085395	0	-	53076912	53076912	8553170	2	500,278,	0,8205,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53084953	53103423	chr19:53084953-53103423	0	-	53084953	53084953	8553170	4	1368,117,84,159,	0,6459,6683,18311,
#Partially deleted in new
chr19	53085160	53103378	chr19:53085160-53103378	0	-	53085160	53085160	8553170	5	58,301,60,84,114,	0,648,1101,6476,18104,
#Partially deleted in new
chr19	53085939	53103416	chr19:53085939-53103416	0	-	53085939	53085939	8553170	5	170,60,117,84,152,	0,322,5473,5697,17325,
#Partially deleted in new
chr19	53086056	53103413	chr19:53086056-53103413	0	-	53086056	53086056	8553170	4	32,60,308,149,	0,205,5356,17208,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53086131	53103422	chr19:53086131-53103422	0	-	53086131	53086131	8553170	5	190,117,84,56,158,	0,5281,5505,7450,17133,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	53091033	53103327	chr19:53091033-53103327	0	-	53091033	53091033	8553170	2	687,63,	0,12231,
#Partially deleted in new
chr19	53095359	53103408	chr19:53095359-53103408	0	-	53095359	53095359	8553170	2	407,144,	0,7905,
#Partially deleted in new
chr19	53107878	53132892	chr19:53107878-53132892	1	-	53108376	53122676	789624	4	2030,121,82,37,	0,8434,14783,24977,
#Partially deleted in new
chr19	53107878	53132875	chr19:53107878-53132875	0	-	53115880	53122676	789624	5	2030,221,121,82,127,	0,7825,8434,14783,24870,
#Partially deleted in new
chr19	53107878	53132875	chr19:53107878-53132875	1	-	53108376	53109354	789624	3	2030,82,20,	0,14783,24977,
#Partially deleted in new
chr19	53107879	53132918	chr19:53107879-53132918	3	-	53108376	53122676	789624	4	2029,121,82,170,	0,8433,14782,24869,
#Partially deleted in new
chr19	53107882	53132888	chr19:53107882-53132888	1	-	53108376	53122418	789624	4	2026,121,209,140,	0,8430,14521,24866,
#Partially deleted in new
chr19	53108100	53132881	chr19:53108100-53132881	0	-	53115880	53122676	789624	5	1808,221,121,82,26,	0,7603,8212,14561,24755,
#Partially deleted in new
chr19	53109606	53132904	chr19:53109606-53132904	0	-	53109606	53109606	8553170	3	302,209,49,	0,12797,23249,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53109671	53129665	chr19:53109671-53129665	1	-	53109895	53129649	789624	4	237,82,155,87,	0,12990,13829,19907,
#Partially deleted in new
chr19	53109691	53129709	chr19:53109691-53129709	0	-	53109691	53129649	789624	4	217,121,82,131,	0,6621,12970,19887,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53109726	53132904	chr19:53109726-53132904	0	-	53109726	53122676	789624	5	182,121,82,155,49,	0,6586,12935,13774,23129,
#Partially deleted in new
chr19	53109737	53133077	chr19:53109737-53133077	0	-	53109737	53109737	8553170	3	171,82,329,	0,12924,23011,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53115733	53132892	chr19:53115733-53132892	0	-	53115733	53115733	8553170	5	191,121,82,155,37,	0,579,6928,7767,17122,
#Partially deleted in new
chr19	53115756	53132900	chr19:53115756-53132900	0	-	53115756	53115756	8553170	4	55,121,213,152,	0,556,6647,16992,
#Partially deleted in new
chr19	53115783	53132920	chr19:53115783-53132920	0	-	53115783	53115783	8553170	4	141,121,213,65,	0,529,6620,17072,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53115846	53129699	chr19:53115846-53129699	0	-	53116429	53129649	789624	5	78,121,82,155,121,	0,466,6815,7654,13732,
#Partially deleted in new
chr19	53116104	53132900	chr19:53116104-53132900	1	-	53116220	53122676	789624	3	329,82,152,	0,6557,16644,
#Partially deleted in new
chr19	53116259	53132916	chr19:53116259-53132916	0	-	53116259	53116259	8553170	3	174,213,168,	0,6144,16489,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53116378	53132900	chr19:53116378-53132900	0	-	53116378	53122676	789624	5	55,82,208,114,45,	0,6283,7122,7414,16477,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53124071	53159053	chr19:53124071-53159053	1	-	53124321	53148777	789624	4	258,132,61,45,	0,24609,29661,34937,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53134936	53159031	chr19:53134936-53159031	3	-	53140307	53153747	0	5	7620,129,127,61,23,	0,13744,14304,18796,24072,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53138704	53159060	chr19:53138704-53159060	1	-	53140307	53153747	0	5	3852,132,127,61,381,	0,9976,10536,15028,19975,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53140109	53159053	chr19:53140109-53159053	1	-	53140307	53153747	0	5	2447,132,127,61,45,	0,8571,9131,13623,18899,
#Partially deleted in new
chr19	53142277	53159047	chr19:53142277-53159047	0	-	53142277	53148777	789624	4	279,132,61,39,	0,6403,11455,16731,
#Partially deleted in new
chr19	53142413	53149535	chr19:53142413-53149535	0	-	53142413	53149274	789624	3	143,129,295,	0,6267,6827,
#Partially deleted in new
chr19	53148891	53159075	chr19:53148891-53159075	0	-	53148891	53148891	8553170	3	476,61,67,	0,4841,10117,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	53149278	53159004	chr19:53149278-53159004	0	-	53149278	53153747	789624	3	89,81,325,	0,4454,9401,
#Partially deleted in new
chr19	53159212	53163899	chr19:53159212-53163899	0	-	53159212	53159212	8553170	3	286,94,50,	0,2245,4637,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53162420	53193356	chr19:53162420-53193356	3	-	53164452	53182898	789624	4	3927,127,60,45,	0,13024,20463,30891,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	53162427	53163563	chr19:53162427-53163563	3	+	53162427	53162427	8553170	2	156,203,	0,933,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	53164137	53193374	chr19:53164137-53193374	1	-	53164452	53166294	789624	2	2210,63,	0,29174,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	53179567	53193386	chr19:53179567-53193386	0	-	53179567	53179567	8553170	3	417,60,75,	0,3316,13744,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53179696	53193327	chr19:53179696-53193327	0	-	53179696	53179696	8553170	5	288,60,135,117,16,	0,3187,10489,12022,13615,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	53180646	53193366	chr19:53180646-53193366	0	-	53180646	53180646	8553170	2	2297,55,	0,12665,
#Partially deleted in new
chr19	53197185	53204055	chr19:53197185-53204055	4	+	53197185	53197185	16724991	3	77,80,40,	0,3438,6830,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	53204015	53214522	chr19:53204015-53214522	5	+	53204015	53204015	16724991	2	127,3517,	0,6990,
#Deleted in new
chr19	53223972	53224879	chr19:53223972-53224879	7	-	53223972	53223972	16724991	1	907,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53235380	53254858	chr19:53235380-53254858	3	-	53236971	53251550	789624	5	3177,154,70,71,25,	0,8363,16155,17705,19453,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	53235384	53251630	chr19:53235384-53251630	1	-	53236971	53251550	789624	3	3173,154,95,	0,8359,16151,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53238289	53254688	chr19:53238289-53254688	0	-	53238289	53251550	789624	5	268,154,70,71,59,	0,5454,13246,14796,16340,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	53238596	53241803	chr19:53238596-53241803	0	-	53238596	53238596	8553170	1	3207,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53241391	53254860	chr19:53241391-53254860	1	-	53241800	53251550	789624	5	474,154,70,71,27,	0,2352,10144,11694,13442,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53241923	53254831	chr19:53241923-53254831	1	-	53242256	53251550	789624	5	407,154,70,71,233,	0,1820,9612,11162,12675,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53242080	53254879	chr19:53242080-53254879	1	-	53242393	53251550	789624	5	360,154,70,71,46,	0,1663,9455,11005,12753,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	53242210	53244011	chr19:53242210-53244011	0	-	53242210	53242210	8553170	1	1801,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53243332	53254846	chr19:53243332-53254846	1	-	53243705	53251550	789624	4	565,70,71,13,	0,8203,9753,11501,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53243555	53254821	chr19:53243555-53254821	1	-	53243705	53251550	789624	4	342,70,71,223,	0,7980,9530,11043,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53249121	53254898	chr19:53249121-53254898	0	-	53249121	53249121	8553170	4	350,70,71,65,	0,2414,3964,5712,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	53258291	53259602	chr19:53258291-53259602	3	+	53258375	53259563	789624	1	1311,	0,
#Partially deleted in new
chr19	53259209	53261837	chr19:53259209-53261837	0	+	53259209	53259209	8553170	2	126,149,	0,2479,
#Deleted in new
chr19	53266675	53267723	chr19:53266675-53267723	3	-	53266759	53267665	789624	1	1048,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	53267869	53270932	chr19:53267869-53270932	3	-	53267869	53267869	8553170	3	57,336,114,	0,2115,2949,
#Partially deleted in new
chr19	53281558	53284944	chr19:53281558-53284944	7	+	53281558	53281558	16724991	4	119,196,109,946,	0,565,1246,2440,
#Partially deleted in new
chr19	53282289	53284349	chr19:53282289-53284349	4	+	53282289	53282289	16724991	3	37,109,350,	0,519,1710,
#Deleted in new
chr19	53289600	53291626	chr19:53289600-53291626	3	-	53289663	53290374	0	1	2026,	0,
#Deleted in new
chr19	53299050	53302126	chr19:53299050-53302126	5	-	53299050	53299050	16724991	4	945,108,201,120,	0,1715,2309,2956,
#Partially deleted in new
chr19	53302121	53308644	chr19:53302121-53308644	7	-	53302121	53302121	16724991	4	63,173,105,148,	0,813,1813,6375,
#Deleted in new
chr19	53315136	53316043	chr19:53315136-53316043	7	+	53315136	53315136	16724991	1	907,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53333745	53356906	chr19:53333745-53356906	3	+	53341307	53353588	789624	4	47,88,127,6089,	0,7489,11760,17072,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53333748	53354869	chr19:53333748-53354869	1	+	53341307	53353588	789624	5	44,102,88,127,4052,	0,7075,7486,11757,17069,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53365692	53384335	chr19:53365692-53384335	3	+	53372281	53382019	789624	4	67,82,127,3614,	0,6522,10077,15029,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	53365692	53376157	chr19:53365692-53376157	0	+	53365692	53365692	8553170	3	67,82,388,	0,6522,10077,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53365703	53376442	chr19:53365703-53376442	1	+	53372281	53376356	789624	4	56,82,127,304,	0,6511,10066,10435,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53365706	53386593	chr19:53365706-53386593	1	+	53375862	53382019	789624	4	53,55,127,5872,	0,6635,10063,15015,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53365712	53386581	chr19:53365712-53386581	1	+	53372281	53384980	789624	4	47,82,127,1612,	0,6502,10057,19257,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53365728	53392217	chr19:53365728-53392217	1	+	53372281	53391884	789624	4	31,82,127,350,	0,6486,10041,26139,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	53379380	53381049	chr19:53379380-53381049	0	+	53379380	53379380	8553170	2	94,328,	0,1341,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	53383922	53385231	chr19:53383922-53385231	0	+	53383922	53383922	8553170	2	134,262,	0,1047,
#Deleted in new
chr19	53386232	53386388	chr19:53386232-53386388	7	+	53386232	53386232	16724991	1	156,	0,
#Partially deleted in new
chr19	53389792	53423097	chr19:53389792-53423097	0	+	53389792	53389792	8553170	3	417,88,36,	0,8150,33269,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	53395143	53427321	chr19:53395143-53427321	0	+	53398015	53423102	789624	8	50,88,127,441,77,122,919,235,	0,2799,6921,27918,29927,30186,30874,31943,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53395149	53412007	chr19:53395149-53412007	3	+	53398015	53409127	789624	4	44,88,127,4310,	0,2793,6915,12548,
#Partially deleted in new
chr19	53395160	53408098	chr19:53395160-53408098	0	+	53407714	53408098	789624	3	33,88,401,	0,2782,12537,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53395172	53430413	chr19:53395172-53430413	1	+	53398015	53423102	789624	4	21,88,127,7352,	0,2770,6892,27889,
#Deleted in new
chr19	53413189	53413345	chr19:53413189-53413345	7	+	53413189	53413189	16724991	1	156,	0,
#Deleted in new
chr19	53426018	53426499	chr19:53426018-53426499	7	-	53426018	53426018	16724991	1	481,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	53431983	53444670	chr19:53431983-53444670	7	+	53431983	53431983	16724991	2	45,2875,	0,9812,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	53431992	53450331	chr19:53431992-53450331	1	+	53447268	53449901	789624	6	36,123,111,88,127,453,	0,13008,14234,15203,17519,17886,
#Deleted in new
chr19	53441862	53442607	chr19:53441862-53442607	5	+	53441862	53441862	16724991	1	745,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53445184	53458260	chr19:53445184-53458260	1	+	53447268	53456748	789624	4	91,138,127,3611,	0,1961,4327,9465,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	53447236	53450354	chr19:53447236-53450354	1	+	53447268	53449953	789624	3	47,127,472,	0,2275,2646,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	53449895	53458260	chr19:53449895-53458260	0	+	53449895	53449953	789624	2	70,3611,	0,4754,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53467734	53496255	chr19:53467734-53496255	3	+	53483822	53492086	789624	4	55,88,127,5881,	0,16015,18897,22640,
#Partially deleted in new
chr19	53467734	53490766	chr19:53467734-53490766	0	+	53490391	53490766	789624	3	55,88,392,	0,16015,22640,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53467742	53490578	chr19:53467742-53490578	0	+	53483822	53490578	789624	5	47,88,127,93,204,	0,16007,18889,20465,22632,
#Partially deleted in new
chr19	53479349	53480091	chr19:53479349-53480091	7	+	53479349	53479349	16724991	1	742,	0,
#Deleted in new
chr19	53495886	53496037	chr19:53495886-53496037	7	+	53495886	53495886	16724991	1	151,	0,
#Deleted in new
chr19	53503391	53504278	chr19:53503391-53504278	5	+	53503391	53503391	16724991	1	887,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	53503818	53512687	chr19:53503818-53512687	7	+	53503818	53503818	16724991	3	278,186,87,	0,8144,8782,
#Partially deleted in new
chr19	53503967	53512411	chr19:53503967-53512411	4	+	53503967	53503967	16724991	2	129,449,	0,7995,
#Deleted in new
chr19	53512091	53512616	chr19:53512091-53512616	7	-	53512091	53512091	16724991	1	525,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53519526	53532808	chr19:53519526-53532808	0	+	53519526	53519526	8553170	4	123,229,68,261,	0,2329,3090,13021,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53520947	53580202	chr19:53520947-53580202	3	+	53569376	53577952	789624	5	1137,68,82,127,3506,	0,1669,48356,50656,55749,
#Partially deleted in new
chr19	53520982	53532972	chr19:53520982-53532972	0	+	53520982	53520982	8553170	3	1102,68,425,	0,1634,11565,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	53521023	53580269	chr19:53521023-53580269	1	+	53569376	53577952	789624	7	1061,68,67,64,82,127,3573,	0,1593,18192,34821,48280,50580,55673,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	53521335	53578017	chr19:53521335-53578017	1	+	53569376	53577952	789624	8	749,68,233,67,64,82,127,1321,	0,1281,1928,17880,34509,47968,50268,55361,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	53521832	53523515	chr19:53521832-53523515	0	+	53521832	53521832	8553170	3	252,68,252,	0,784,1431,
#Partially deleted in new
chr19	53521838	53576750	chr19:53521838-53576750	0	+	53569376	53576750	789624	7	246,67,64,30,82,127,54,	0,17377,34006,41924,47465,49765,54858,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	53521855	53578081	chr19:53521855-53578081	1	+	53569376	53577952	789624	7	229,68,64,30,82,127,1385,	0,761,33989,41907,47448,49748,54841,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53536322	53580269	chr19:53536322-53580269	1	+	53569376	53577952	789624	4	35,82,127,3573,	0,32981,35281,40374,
#Partially deleted in new
chr19	53537252	53555852	chr19:53537252-53555852	0	+	53537252	53537252	8553170	3	503,67,8,	0,1963,18592,
#Partially deleted in new
chr19	53537684	53576859	chr19:53537684-53576859	0	+	53569376	53576859	789624	6	71,67,64,82,127,163,	0,1531,18160,31619,33919,39012,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	53538078	53578386	chr19:53538078-53578386	1	+	53569376	53577952	789624	6	218,67,64,82,127,1690,	0,1137,17766,31225,33525,38618,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53538142	53578386	chr19:53538142-53578386	1	+	53569376	53577952	789624	5	154,67,82,127,1690,	0,1073,31161,33461,38554,
#Partially deleted in new
chr19	53538144	53539524	chr19:53538144-53539524	0	+	53538144	53538144	8553170	2	152,309,	0,1071,
#Partially deleted in new
chr19	53538285	53576820	chr19:53538285-53576820	0	+	53569376	53576820	789624	6	206,67,64,82,127,124,	0,930,17559,31018,33318,38411,
#Partially deleted in new
chr19	53538304	53576701	chr19:53538304-53576701	0	+	53569376	53576701	789624	7	187,67,64,30,82,127,5,	0,911,17540,25458,30999,33299,38392,
#Partially deleted in new
chr19	53538322	53539357	chr19:53538322-53539357	0	+	53538322	53538322	8553170	2	169,181,	0,854,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	53538429	53580269	chr19:53538429-53580269	1	+	53569376	53577952	789624	6	62,67,64,82,127,3573,	0,786,17415,30874,33174,38267,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	53538787	53578081	chr19:53538787-53578081	1	+	53569376	53577952	789624	6	165,67,64,82,127,1385,	0,428,17057,30516,32816,37909,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53554498	53578389	chr19:53554498-53578389	1	+	53569376	53577952	789624	5	195,64,82,127,1693,	0,1346,14805,17105,22198,
#Partially deleted in new
chr19	53554600	53576875	chr19:53554600-53576875	0	+	53569376	53576875	789624	5	93,59,82,127,179,	0,1244,14703,17003,22096,
#Partially deleted in new
chr19	53554612	53577060	chr19:53554612-53577060	0	+	53569376	53577060	789624	5	276,64,82,127,364,	0,1232,14691,16991,22084,
#Partially deleted in new
chr19	53554826	53577092	chr19:53554826-53577092	0	+	53569376	53577092	789624	6	62,64,30,82,127,396,	0,1018,8936,14477,16777,21870,
#Partially deleted in new
chr19	53554826	53577690	chr19:53554826-53577690	1	+	53569376	53577447	789624	6	62,64,82,127,157,247,	0,1018,14477,16777,21870,22617,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53554826	53580269	chr19:53554826-53580269	1	+	53569376	53577952	789624	5	62,64,82,127,3573,	0,1018,14477,16777,21870,
#Partially deleted in new
chr19	53555239	53576817	chr19:53555239-53576817	0	+	53569376	53576817	789624	5	179,64,82,127,121,	0,605,14064,16364,21457,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	53555306	53580269	chr19:53555306-53580269	1	+	53569376	53577952	789624	6	275,64,30,82,127,3573,	0,538,8456,13997,16297,21390,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	53555398	53578081	chr19:53555398-53578081	1	+	53569376	53577952	789624	5	183,64,82,127,1385,	0,446,13905,16205,21298,
#Partially deleted in new
chr19	53555486	53576753	chr19:53555486-53576753	0	+	53569376	53576753	789624	4	422,82,127,57,	0,13817,16117,21210,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53599627	53603497	chr19:53599627-53603497	5	-	53599627	53599627	16724991	4	807,108,167,146,	0,1637,2369,3724,
#Partially deleted in new
chr19	53600318	53608451	chr19:53600318-53608451	7	-	53600318	53600318	16724991	9	116,108,167,199,102,138,214,129,183,	0,946,1678,3033,4083,5815,6119,6615,7950,
#Partially deleted in new
chr19	53616801	53617254	chr19:53616801-53617254	7	+	53616801	53616801	16724991	1	453,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	53629712	53630041	chr19:53629712-53630041	3	+	53629712	53629712	8553170	1	329,	0,
#Partially deleted in new
chr19	53632055	53637009	chr19:53632055-53637009	3	+	53632106	53636988	789624	3	79,155,414,	0,2475,4540,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	53653684	53653791	chr19:53653684-53653791	3	+	53653684	53653684	8553170	1	107,	0,
#Deleted in new
chr19	53657399	53658462	chr19:53657399-53658462	7	-	53657399	53657399	16724991	2	63,666,	0,397,
#Partially deleted in new
chr19	53666678	53666762	chr19:53666678-53666762	3	+	53666678	53666678	5263520	1	84,	0,
#Deleted in new
chr19	53669156	53669254	chr19:53669156-53669254	3	+	53669156	53669156	5263520	1	98,	0,
#Partially deleted in new
chr19	53671967	53672040	chr19:53671967-53672040	3	+	53671967	53671967	5263520	1	73,	0,
#Partially deleted in new
chr19	53674196	53674320	chr19:53674196-53674320	3	+	53674196	53674196	5263520	1	124,	0,
#Partially deleted in new
chr19	53675710	53675797	chr19:53675710-53675797	3	+	53675710	53675710	5263520	1	87,	0,
#Partially deleted in new
chr19	53679002	53679085	chr19:53679002-53679085	3	+	53679002	53679002	5263520	1	83,	0,
#Partially deleted in new
chr19	53679939	53680023	chr19:53679939-53680023	3	+	53679939	53679939	5263520	1	84,	0,
#Partially deleted in new
chr19	53682158	53682245	chr19:53682158-53682245	3	+	53682158	53682158	5263520	1	87,	0,
#Deleted in new
chr19	53685008	53685091	chr19:53685008-53685091	3	+	53685008	53685008	5263520	1	83,	0,
#Deleted in new
chr19	53686468	53686555	chr19:53686468-53686555	3	+	53686468	53686468	5263520	1	87,	0,
#Deleted in new
chr19	53688480	53688567	chr19:53688480-53688567	3	+	53688480	53688480	5263520	1	87,	0,
#Deleted in new
chr19	53690880	53690965	chr19:53690880-53690965	3	+	53690880	53690880	5263520	1	85,	0,
#Deleted in new
chr19	53694392	53694475	chr19:53694392-53694475	3	+	53694392	53694392	5263520	1	83,	0,
#Deleted in new
chr19	53695212	53695293	chr19:53695212-53695293	3	+	53695212	53695212	5263520	1	81,	0,
#Deleted in new
chr19	53697532	53697617	chr19:53697532-53697617	3	+	53697532	53697532	5263520	1	85,	0,
#Partially deleted in new
chr19	53698384	53698471	chr19:53698384-53698471	3	+	53698384	53698384	5263520	1	87,	0,
#Partially deleted in new
chr19	53700014	53700101	chr19:53700014-53700101	3	+	53700014	53700014	5263520	1	87,	0,
#Partially deleted in new
chr19	53701226	53701287	chr19:53701226-53701287	3	+	53701226	53701226	5263520	1	61,	0,
#Partially deleted in new
chr19	53702736	53702819	chr19:53702736-53702819	3	+	53702736	53702736	5263520	1	83,	0,
#Partially deleted in new
chr19	53706251	53706336	chr19:53706251-53706336	3	+	53706251	53706251	5263520	1	85,	0,
#Partially deleted in new
chr19	53707452	53707539	chr19:53707452-53707539	3	+	53707452	53707452	5263520	1	87,	0,
#Partially deleted in new
chr19	53708734	53708835	chr19:53708734-53708835	3	+	53708734	53708734	5263520	1	101,	0,
#Partially deleted in new
chr19	53711001	53711088	chr19:53711001-53711088	3	+	53711001	53711001	5263520	1	87,	0,
#Deleted in new
chr19	53712267	53712354	chr19:53712267-53712354	3	+	53712267	53712267	5263520	1	87,	0,
#Partially deleted in new
chr19	53713346	53713434	chr19:53713346-53713434	3	+	53713346	53713346	5263520	1	88,	0,
#Partially deleted in new
chr19	53716593	53716680	chr19:53716593-53716680	3	+	53716593	53716593	5263520	1	87,	0,
#Deleted in new
chr19	53719063	53719165	chr19:53719063-53719165	3	-	53719063	53719063	8553170	1	102,	0,
#Deleted in new
chr19	53720095	53720182	chr19:53720095-53720182	3	+	53720095	53720095	5263520	1	87,	0,
#Deleted in new
chr19	53721075	53721142	chr19:53721075-53721142	3	+	53721075	53721075	5263520	1	67,	0,
#Deleted in new
chr19	53722165	53722255	chr19:53722165-53722255	3	+	53722165	53722165	5263520	1	90,	0,
#Partially deleted in new
chr19	53725441	53725526	chr19:53725441-53725526	3	+	53725441	53725441	5263520	1	85,	0,
#Partially deleted in new
chr19	53726921	53726986	chr19:53726921-53726986	3	+	53726921	53726921	5263520	1	65,	0,
#Partially deleted in new
chr19	53729837	53729925	chr19:53729837-53729925	3	+	53729837	53729837	5263520	1	88,	0,
#Deleted in new
chr19	53731005	53731090	chr19:53731005-53731090	3	+	53731005	53731005	5263520	1	85,	0,
#Partially deleted in new
chr19	53732980	53733083	chr19:53732980-53733083	3	-	53732980	53732980	8553170	1	103,	0,
#Partially deleted in new
chr19	53734876	53734963	chr19:53734876-53734963	3	+	53734876	53734876	5263520	1	87,	0,
#Partially deleted in new
chr19	53736844	53736934	chr19:53736844-53736934	3	+	53736844	53736844	5263520	1	90,	0,
#Deleted in new
chr19	53739332	53739419	chr19:53739332-53739419	3	+	53739332	53739332	5263520	1	87,	0,
#Partially deleted in new
chr19	53741312	53741407	chr19:53741312-53741407	3	+	53741312	53741312	5263520	1	95,	0,
#Partially deleted in new
chr19	53742511	53742599	chr19:53742511-53742599	3	+	53742511	53742511	5263520	1	88,	0,
#Partially deleted in new
chr19	53745003	53745105	chr19:53745003-53745105	3	-	53745003	53745003	8553170	1	102,	0,
#Deleted in new
chr19	53748635	53748722	chr19:53748635-53748722	3	+	53748635	53748635	5263520	1	87,	0,
#Deleted in new
chr19	53749850	53749951	chr19:53749850-53749951	3	-	53749850	53749850	8553170	1	101,	0,
#Deleted in new
chr19	53751210	53751297	chr19:53751210-53751297	3	+	53751210	53751210	5263520	1	87,	0,
#Deleted in new
chr19	53752396	53752481	chr19:53752396-53752481	3	+	53752396	53752396	5263520	1	85,	0,
#Partially deleted in new
chr19	53754017	53754102	chr19:53754017-53754102	3	+	53754017	53754017	5263520	1	85,	0,
#Partially deleted in new
chr19	53756740	53756830	chr19:53756740-53756830	3	+	53756740	53756740	5263520	1	90,	0,
#Partially deleted in new
chr19	53758231	53758318	chr19:53758231-53758318	3	+	53758231	53758231	5263520	1	87,	0,
#Partially deleted in new
chr19	53760086	53760188	chr19:53760086-53760188	3	-	53760086	53760086	8553170	1	102,	0,
#Partially deleted in new
chr19	53761132	53761222	chr19:53761132-53761222	3	+	53761132	53761132	5263520	1	90,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	53761960	53764199	chr19:53761960-53764199	3	+	53761960	53761960	8553170	1	2239,	0,
#Deleted in new
chr19	53762343	53762430	chr19:53762343-53762430	3	+	53762343	53762343	5263520	1	87,	0,
#Deleted in new
chr19	53766533	53766632	chr19:53766533-53766632	3	-	53766533	53766533	8553170	1	99,	0,
#Partially deleted in new
chr19	53767970	53768553	chr19:53767970-53768553	7	-	53767970	53767970	16724991	2	161,95,	0,488,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	53772505	53773280	chr19:53772505-53773280	7	-	53772505	53772505	16724991	1	775,	0,
#Deleted in new
chr19	53775598	53775882	chr19:53775598-53775882	7	+	53775598	53775598	16724991	1	284,	0,
#Partially deleted in new
chr19	53787596	53788169	chr19:53787596-53788169	3	-	53787596	53787596	8553170	2	163,283,	0,290,
#Partially deleted in new
chr19	53787674	53787741	chr19:53787674-53787741	3	+	53787674	53787674	5263520	1	67,	0,
#Partially deleted in new
chr19	53787676	53787742	chr19:53787676-53787742	3	-	53787676	53787676	5263520	1	66,	0,
#Partially deleted in new
chr19	53787889	53787956	chr19:53787889-53787956	3	+	53787889	53787889	5263520	1	67,	0,
#Partially deleted in new
chr19	53788704	53788773	chr19:53788704-53788773	3	+	53788704	53788704	5263520	1	69,	0,
#Partially deleted in new
chr19	53788781	53789168	chr19:53788781-53789168	3	+	53788781	53788781	8553170	1	387,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	53793602	53824343	chr19:53793602-53824343	3	-	53794048	53824174	0	10	534,171,171,171,171,171,171,1702,81,458,	0,2256,4640,7624,10349,11677,13892,15984,21305,30283,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	53793741	53824317	chr19:53793741-53824317	1	-	53794048	53824174	0	9	395,171,171,171,171,171,1702,81,432,	0,2117,7485,10210,11538,13753,15845,21166,30144,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	53793742	53824394	chr19:53793742-53824394	1	-	53794048	53824174	789624	9	394,174,171,171,171,174,1702,81,509,	0,4497,7484,10209,11537,13752,15844,21165,30143,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	53793742	53824394	chr19:53793742-53824394	1	-	53794048	53824174	789624	7	394,174,171,174,1702,81,509,	0,10206,11537,13752,15844,21165,30143,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	53793742	53824394	chr19:53793742-53824394	1	-	53794048	53824174	0	10	394,171,171,171,171,171,174,1702,81,509,	0,2116,4500,7484,10209,11537,13752,15844,21165,30143,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	53793742	53808705	chr19:53793742-53808705	0	-	53793742	53793742	8553170	7	394,171,171,171,171,190,1211,	0,2116,7484,10209,11537,11851,13752,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	53864762	53866140	chr19:53864762-53866140	3	+	53864762	53864762	8553170	3	129,219,207,	0,747,1171,
#Partially deleted in new
chr19	53866222	53874256	chr19:53866222-53874256	0	+	53873529	53874256	789624	3	195,85,729,	0,3531,7305,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	53866356	53876428	chr19:53866356-53876428	3	+	53873529	53874498	789624	3	61,85,2901,	0,3397,7171,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	53867882	53876437	chr19:53867882-53876437	1	+	53873529	53874498	789624	3	61,85,2910,	0,1871,5645,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	53867882	53876428	chr19:53867882-53876428	1	+	53873529	53874498	789624	3	61,149,2901,	0,1807,5645,
#Partially deleted in new
chr19	53867882	53874307	chr19:53867882-53874307	0	+	53873529	53874307	789624	2	61,780,	0,5645,
#Partially deleted in new
chr19	53867882	53874094	chr19:53867882-53874094	0	+	53873529	53874094	789624	3	61,149,567,	0,1807,5645,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	53869405	53876435	chr19:53869405-53876435	1	+	53873529	53874498	789624	3	193,85,2908,	0,348,4122,
#Partially deleted in new
chr19	53869438	53874619	chr19:53869438-53874619	1	+	53873529	53874498	789624	2	400,1092,	0,4089,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	53874625	53876049	chr19:53874625-53876049	3	-	53874625	53874625	8553170	2	196,227,	0,1197,
#Partially deleted in new
chr19	53879189	53889930	chr19:53879189-53889930	0	+	53889736	53889930	789624	6	191,108,32,83,112,45,	0,3367,3973,4971,10448,10696,
#Partially deleted in new
chr19	53881783	53891827	chr19:53881783-53891827	0	+	53889736	53891827	789624	7	57,108,32,83,112,132,154,	0,773,1379,2377,7854,8102,9890,
#Partially deleted in new
chr19	53882212	53907652	chr19:53882212-53907652	3	+	53882494	53906895	0	18	452,32,83,112,132,157,135,88,30,153,189,92,63,139,81,108,141,946,	0,950,1948,7425,7673,9461,10296,10775,11149,15746,16227,18020,18206,18398,20860,22422,24104,24494,
#Partially deleted in new
chr19	53882228	53889979	chr19:53882228-53889979	0	+	53889736	53889979	789624	6	131,108,32,83,112,94,	0,328,934,1932,7409,7657,
#Partially deleted in new
chr19	53909334	53943941	chr19:53909334-53943941	3	+	53912831	53942293	789624	6	183,225,87,141,146,1906,	0,3468,5165,6030,32135,32701,
#Partially deleted in new
chr19	53909334	53941593	chr19:53909334-53941593	0	+	53909334	53909334	8553170	3	183,141,124,	0,6030,32135,
#Partially deleted in new
chr19	53912736	53942386	chr19:53912736-53942386	1	+	53912831	53942293	789624	5	291,87,141,146,351,	0,1763,2628,28733,29299,
#Partially deleted in new
chr19	53912816	53941661	chr19:53912816-53941661	1	+	53912831	53941642	789624	4	211,87,141,192,	0,1683,2548,28653,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	53963039	53990215	chr19:53963039-53990215	1	+	53963142	53982849	789624	4	386,84,141,8136,	0,15106,16827,19040,
#Partially deleted in new
chr19	53963142	53982849	chr19:53963142-53982849	3	+	53963142	53982849	789624	4	283,84,141,770,	0,15003,16724,18937,
#Deleted in new
chr19	53982306	53982397	chr19:53982306-53982397	3	+	53982306	53982306	5263520	1	91,	0,
#Partially deleted in new
chr19	53992287	54012669	chr19:53992287-54012669	3	+	53992877	54012189	789624	4	921,75,138,719,	0,5951,7346,19663,
#Partially deleted in new
chr19	53992287	54012664	chr19:53992287-54012664	1	+	53992877	54012189	789624	2	921,714,	0,19663,
#Partially deleted in new
chr19	53992877	54012189	chr19:53992877-54012189	1	+	53992877	54012189	789624	3	331,75,239,	0,5361,19073,
#Deleted in new
chr19	54031411	54031504	chr19:54031411-54031504	7	+	54031411	54031411	16724991	1	93,	0,
#Partially deleted in new
chr19	54040824	54063953	chr19:54040824-54063953	3	-	54040960	54063777	789624	9	256,38,38,28,93,39,285,36,210,	0,954,1091,1344,1452,10585,17481,17872,22919,
#Partially deleted in new
chr19	54040824	54058423	chr19:54040824-54058423	0	-	54040960	54058423	789624	6	256,38,38,28,39,118,	0,954,1091,1344,10585,17481,
#Partially deleted in new
chr19	54040828	54063953	chr19:54040828-54063953	0	-	54042238	54063777	789624	8	252,38,38,143,39,285,36,210,	0,950,1087,1398,10581,17477,17868,22915,
#Partially deleted in new
chr19	54040832	54063953	chr19:54040832-54063953	1	-	54040960	54063777	789624	8	248,38,38,28,39,285,36,210,	0,946,1083,1336,10577,17473,17864,22911,
#Partially deleted in new
chr19	54040833	54063953	chr19:54040833-54063953	1	-	54040960	54063777	789624	6	247,38,38,28,93,210,	0,945,1082,1335,1443,22910,
#Partially deleted in new
chr19	54051409	54063943	chr19:54051409-54063943	0	-	54051409	54063777	789624	5	39,294,285,36,200,	0,4096,6896,7287,12334,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	54069894	54076545	chr19:54069894-54076545	1	-	54070002	54076275	789624	5	266,297,291,36,328,	0,4025,4929,5988,6323,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	54069946	54081365	chr19:54069946-54081365	3	-	54070002	54081340	789624	5	214,297,291,36,59,	0,3973,4877,5936,11360,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	54094667	54100792	chr19:54094667-54100792	1	-	54095677	54100792	0	3	1486,303,37,	0,2194,6088,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	54094669	54102692	chr19:54094669-54102692	1	-	54095677	54100792	0	5	1484,303,33,196,39,	0,2192,5078,6086,7984,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	54094669	54100857	chr19:54094669-54100857	1	-	54095220	54100792	789624	4	688,282,303,102,	0,1202,2192,6086,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	54094669	54100792	chr19:54094669-54100792	1	-	54095220	54100792	789624	6	688,282,303,12,33,37,	0,1202,2192,4920,5078,6086,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	54094669	54100838	chr19:54094669-54100838	1	-	54095220	54100792	789624	5	688,282,303,33,83,	0,1202,2192,5078,6086,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	54094669	54100815	chr19:54094669-54100815	1	-	54095677	54100792	789624	5	1484,303,12,33,60,	0,2192,4920,5078,6086,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	54094669	54102686	chr19:54094669-54102686	3	-	54095677	54100792	789624	6	1484,303,12,33,196,33,	0,2192,4920,5078,6086,7984,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	54094669	54102686	chr19:54094669-54102686	1	-	54095677	54100792	0	4	1484,303,196,33,	0,2192,6086,7984,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	54094669	54100792	chr19:54094669-54100792	1	-	54095220	54100792	789624	6	688,282,304,14,33,37,	0,1202,2192,2498,5078,6086,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	54094669	54102686	chr19:54094669-54102686	1	-	54095220	54100792	789624	7	688,282,303,12,33,196,33,	0,1202,2192,4920,5078,6086,7984,
#Partially deleted in new
chr19	54095773	54100841	chr19:54095773-54100841	1	-	54095867	54100792	789624	4	380,130,33,86,	0,1088,3974,4982,
#Partially deleted in new
chr19	54102820	54108704	chr19:54102820-54108704	0	+	54102878	54106902	0	5	68,75,78,168,265,	0,293,3113,3990,5619,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	54102836	54107568	chr19:54102836-54107568	3	+	54102878	54106902	0	4	52,75,78,758,	0,277,3097,3974,
#Partially deleted in new
chr19	54102854	54106961	chr19:54102854-54106961	0	+	54102878	54105939	789624	5	34,75,107,78,151,	0,259,2742,3079,3956,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	54102854	54106470	chr19:54102854-54106470	1	+	54102878	54106070	789624	3	34,75,537,	0,259,3079,
#Partially deleted in new
chr19	54102868	54106965	chr19:54102868-54106965	1	+	54102878	54106823	789624	4	30,75,78,155,	0,245,3065,3942,
#Partially deleted in new
chr19	54102868	54108533	chr19:54102868-54108533	1	+	54102878	54108522	789624	4	20,75,78,94,	0,245,3065,5571,
#Partially deleted in new
chr19	54102876	54106961	chr19:54102876-54106961	0	+	54102876	54102876	8553170	3	312,78,151,	0,3057,3934,
#Partially deleted in new
chr19	54102884	54106961	chr19:54102884-54106961	1	+	54105977	54106902	789624	4	75,75,78,151,	0,229,3049,3926,
#Partially deleted in new
chr19	54107012	54115675	chr19:54107012-54115675	3	-	54107049	54115269	789624	6	157,219,70,71,259,429,	0,1013,1313,3038,7429,8234,
#Partially deleted in new
chr19	54107019	54115288	chr19:54107019-54115288	1	-	54108048	54115269	789624	6	150,182,70,71,259,42,	0,1006,1306,3031,7422,8227,
#Partially deleted in new
chr19	54107019	54115074	chr19:54107019-54115074	1	-	54107049	54114696	789624	6	150,219,70,71,259,35,	0,1006,1306,3031,7422,8020,
#Partially deleted in new
chr19	54107019	54115285	chr19:54107019-54115285	0	-	54108359	54115269	789624	5	150,219,70,259,39,	0,1006,1306,7422,8227,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	54108546	54108929	chr19:54108546-54108929	0	+	54108546	54108546	8553170	2	180,102,	0,281,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	54108703	54109257	chr19:54108703-54109257	0	+	54108703	54108703	8553170	3	23,67,176,	0,124,378,
#Partially deleted in new
chr19	54115409	54131719	chr19:54115409-54131719	1	+	54118278	54131322	0	13	388,185,61,84,98,107,170,158,90,128,73,314,413,	0,2861,3163,6450,7087,8044,8339,9089,11118,12663,12895,13647,15897,
#Partially deleted in new
chr19	54115456	54131709	chr19:54115456-54131709	3	+	54118278	54131432	0	14	341,185,61,84,98,107,170,158,90,128,73,129,99,403,	0,2814,3116,6403,7040,7997,8292,9042,11071,12616,12848,13600,13815,15850,
#Partially deleted in new
chr19	54115753	54124654	chr19:54115753-54124654	0	+	54118278	54124654	789624	8	44,208,61,84,98,107,170,156,	0,2494,2819,6106,6743,7700,7995,8745,
#Partially deleted in new
chr19	54115778	54124630	chr19:54115778-54124630	0	+	54118278	54124630	789624	8	19,215,61,84,98,107,170,132,	0,2462,2794,6081,6718,7675,7970,8720,
#Partially deleted in new
chr19	54115808	54124583	chr19:54115808-54124583	0	+	54118278	54124583	789624	8	64,185,61,84,98,107,170,85,	0,2462,2764,6051,6688,7645,7940,8690,
#Partially deleted in new
chr19	54118270	54131709	chr19:54118270-54131709	1	+	54118278	54131432	789624	13	185,61,84,98,107,170,158,90,110,73,129,99,403,	0,302,3589,4226,5183,5478,6228,8257,9820,10034,10786,11001,13036,
#Deleted in new
chr19	54118405	54118811	chr19:54118405-54118811	0	+	54118405	54118405	8553170	2	50,239,	0,167,
#Partially deleted in new
chr19	54118408	54131709	chr19:54118408-54131709	0	+	54118408	54118408	8553170	11	47,61,84,98,107,170,158,90,305,314,403,	0,164,3451,4088,5045,5340,6090,8119,9664,10648,12898,
#Partially deleted in new
chr19	54118612	54128197	chr19:54118612-54128197	0	+	54118612	54118612	8553170	8	21,84,98,107,170,158,118,125,	0,3247,3884,4841,5136,5886,7887,9460,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	54119510	54125343	chr19:54119510-54125343	3	-	54119510	54119510	8553170	4	882,80,344,2852,	0,2325,2552,2981,
#Partially deleted in new
chr19	54137716	54155708	chr19:54137716-54155708	3	+	54142978	54155407	0	18	277,75,68,75,90,129,96,220,134,57,388,124,199,100,199,133,126,400,	0,5212,5402,5725,5943,6289,6520,7881,8193,8884,10431,10903,11843,14509,14711,15150,15998,17592,
#Deleted in new
chr19	54137748	54145698	chr19:54137748-54145698	0	+	54142978	54145698	789624	8	245,78,68,75,90,129,96,101,	0,5177,5370,5693,5911,6257,6488,7849,
#Partially deleted in new
chr19	54137761	54155680	chr19:54137761-54155680	0	+	54137761	54137761	8553170	16	232,75,68,75,475,96,220,134,57,388,124,199,100,199,129,1966,	0,5167,5357,5680,5898,6475,7836,8148,8839,10386,10858,11798,14464,14666,15109,15953,
#Deleted in new
chr19	54137761	54145718	chr19:54137761-54145718	0	+	54145657	54145718	789624	4	232,78,69,121,	0,5164,6502,7836,
#Deleted in new
chr19	54137768	54148699	chr19:54137768-54148699	0	+	54142978	54148699	789624	12	225,75,68,75,90,129,96,223,134,57,388,80,	0,5160,5350,5673,5891,6237,6468,7826,8141,8832,10379,10851,
#Deleted in new
chr19	54137773	54143339	chr19:54137773-54143339	0	+	54137773	54137773	8553170	3	220,75,221,	0,5155,5345,
#Partially deleted in new
chr19	54137781	54155681	chr19:54137781-54155681	1	+	54142978	54153751	789624	17	212,75,68,75,90,129,96,220,134,57,388,124,199,100,199,216,1967,	0,5147,5337,5660,5878,6224,6455,7816,8128,8819,10366,10838,11778,14444,14646,15085,15933,
#Partially deleted in new
chr19	54141395	54155680	chr19:54141395-54155680	1	+	54142978	54155407	0	17	1608,68,75,90,129,96,220,134,57,388,124,199,100,199,133,126,372,	0,1723,2046,2264,2610,2841,4202,4514,5205,6752,7224,8164,10830,11032,11471,12319,13913,
#Partially deleted in new
chr19	54143736	54155681	chr19:54143736-54155681	0	+	54143736	54145622	789624	15	13,129,96,276,134,57,388,124,199,100,199,133,213,344,373,	0,269,500,1805,2173,2864,4411,4883,5823,8489,8691,9130,9444,9760,11572,
#Partially deleted in new
chr19	54144004	54155680	chr19:54144004-54155680	1	+	54145657	54153505	789624	14	130,96,276,134,57,388,124,199,100,199,133,213,344,372,	0,232,1537,1905,2596,4143,4615,5555,8221,8423,8862,9176,9492,11304,
#Partially deleted in new
chr19	54149559	54154455	chr19:54149559-54154455	0	+	54149559	54154051	789624	6	199,100,199,133,126,512,	0,2666,2868,3307,4155,4384,
#Partially deleted in new
chr19	54149559	54155463	chr19:54149559-54155463	0	+	54149559	54153751	789624	5	199,100,133,126,155,	0,2666,3307,4155,5749,
#Partially deleted in new
chr19	54149569	54152335	chr19:54149569-54152335	0	+	54149569	54149569	8553170	2	189,110,	0,2656,
#Partially deleted in new
chr19	54149729	54155371	chr19:54149729-54155371	0	+	54149729	54153505	789624	6	29,100,199,133,344,63,	0,2496,2698,3137,3767,5579,
#Deleted in new
chr19	54153723	54155681	chr19:54153723-54155681	0	+	54153723	54155407	789624	2	117,424,	0,1534,
#Partially deleted in new
chr19	54155160	54159882	chr19:54155160-54159882	3	-	54155720	54159695	789624	4	780,263,180,319,	0,1602,3121,4403,
#Deleted in new
chr19	54160107	54160649	chr19:54160107-54160649	0	-	54160107	54160107	8553170	2	267,183,	0,359,
#Partially deleted in new
chr19	54160107	54164716	chr19:54160107-54164716	0	-	54160107	54160107	8553170	9	267,79,156,131,184,98,127,235,283,	0,359,770,1022,1994,2565,2925,3545,4326,
#Deleted in new
chr19	54160107	54160972	chr19:54160107-54160972	0	-	54160537	54160972	789624	3	267,144,95,	0,359,770,
#Partially deleted in new
chr19	54160107	54173171	chr19:54160107-54173171	3	-	54160305	54173117	789624	15	267,79,156,131,184,98,127,164,168,148,122,233,149,214,133,	0,359,770,1022,1994,2565,2925,3616,4326,5311,8063,8340,9404,11762,12931,
#Partially deleted in new
chr19	54160164	54173250	chr19:54160164-54173250	1	-	54160305	54173117	789624	15	210,79,156,131,184,98,127,164,168,148,122,233,149,232,212,	0,302,713,965,1937,2508,2868,3559,4269,5254,8006,8283,9347,11705,12874,
#Deleted in new
chr19	54162225	54163267	chr19:54162225-54163267	0	-	54162225	54162225	8553170	3	60,98,235,	0,447,807,
#Partially deleted in new
chr19	54163107	54173160	chr19:54163107-54173160	0	-	54163107	54163107	8553170	4	52,149,214,122,	0,6404,8762,9931,
#Partially deleted in new
chr19	54164538	54171949	chr19:54164538-54171949	0	-	54164538	54164538	8553170	5	63,122,233,149,80,	0,3632,3909,4973,7331,
#Partially deleted in new
chr19	54164551	54168482	chr19:54164551-54168482	0	-	54164551	54164551	8553170	3	50,148,312,	0,867,3619,
#Partially deleted in new
chr19	54168170	54172752	chr19:54168170-54172752	0	-	54168170	54171892	789624	5	122,233,149,214,39,	0,277,1341,3699,4543,
#Partially deleted in new
chr19	54173411	54189443	chr19:54173411-54189443	0	-	54183673	54188508	789624	7	1020,177,361,160,130,79,106,	0,5353,7361,10109,14805,15021,15926,
#Partially deleted in new
chr19	54173412	54189882	chr19:54173412-54189882	1	-	54174043	54188330	789624	7	1019,177,361,160,130,79,545,	0,5352,7360,10108,14804,15020,15925,
#Partially deleted in new
chr19	54173414	54189815	chr19:54173414-54189815	3	-	54174043	54188508	789624	8	1017,177,361,160,127,130,79,478,	0,5350,7358,10106,13746,14802,15018,15923,
#Partially deleted in new
chr19	54173414	54189568	chr19:54173414-54189568	1	-	54174043	54188330	789624	6	1017,177,361,160,130,231,	0,5350,7358,10106,14802,15923,
#Partially deleted in new
chr19	54173418	54180790	chr19:54173418-54180790	0	-	54173418	54173418	8553170	2	1013,2026,	0,5346,
#Partially deleted in new
chr19	54174073	54188278	chr19:54174073-54188278	0	-	54174408	54188278	789624	4	358,160,127,62,	0,9447,13087,14143,
#Partially deleted in new
chr19	54178336	54189672	chr19:54178336-54189672	1	-	54178760	54188508	789624	7	605,361,160,127,130,79,335,	0,2436,5184,8824,9880,10096,11001,
#Partially deleted in new
chr19	54179662	54183634	chr19:54179662-54183634	0	-	54180702	54183634	789624	2	1471,114,	0,3858,
#Partially deleted in new
chr19	54180858	54189295	chr19:54180858-54189295	0	-	54180858	54188508	789624	6	275,160,127,130,79,105,	0,2662,6302,7358,7574,8332,
#Partially deleted in new
chr19	54181115	54189344	chr19:54181115-54189344	0	-	54181115	54188508	789624	6	18,160,127,130,79,43,	0,2405,6045,7101,7317,8186,
#Partially deleted in new
chr19	54181123	54188412	chr19:54181123-54188412	0	-	54181123	54181123	8553170	4	10,160,127,196,	0,2397,6037,7093,
#Partially deleted in new
chr19	54183520	54189549	chr19:54183520-54189549	0	-	54183520	54183520	8553170	4	160,127,130,212,	0,3640,4696,5817,
#Partially deleted in new
chr19	54186955	54189360	chr19:54186955-54189360	0	-	54186955	54186955	8553170	4	332,130,79,23,	0,1261,1477,2382,
#Partially deleted in new
chr19	54187285	54189569	chr19:54187285-54189569	0	-	54187285	54187285	8553170	4	24,130,79,232,	0,931,1147,2052,
#Deleted in new
chr19	54189937	54192355	chr19:54189937-54192355	0	+	54191364	54192355	789624	4	225,247,244,240,	0,1423,1783,2178,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	54190267	54194536	chr19:54190267-54194536	3	+	54191364	54193362	789624	5	183,247,244,258,1362,	0,1093,1453,1848,2907,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	54190267	54194536	chr19:54190267-54194536	1	+	54190366	54193671	789624	6	104,247,244,258,144,915,	0,1093,1453,1848,2907,3354,
#Deleted in new
chr19	54190267	54192373	chr19:54190267-54192373	0	+	54190366	54192373	789624	4	104,247,244,258,	0,1093,1453,1848,
#Partially deleted in new
chr19	54190342	54193666	chr19:54190342-54193666	0	+	54190342	54190342	8553170	3	1622,258,492,	0,1773,2832,
#Partially deleted in new
chr19	54190730	54193666	chr19:54190730-54193666	1	+	54191364	54193362	789624	5	307,247,244,258,492,	0,630,990,1385,2444,
#Partially deleted in new
chr19	54191252	54193666	chr19:54191252-54193666	1	+	54191364	54193362	789624	4	355,244,258,492,	0,468,863,1922,
#Partially deleted in new
chr19	54200741	54207647	chr19:54200741-54207647	3	+	54201184	54207575	0	5	147,122,123,187,250,	0,418,745,5534,6656,
#Partially deleted in new
chr19	54200808	54206847	chr19:54200808-54206847	0	+	54200808	54200808	8553170	4	80,122,123,572,	0,351,678,5467,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	54200857	54249003	chr19:54200857-54249003	0	+	54201184	54231754	789624	5	31,122,123,196,1912,	0,302,629,30883,46234,
#Partially deleted in new
chr19	54200857	54206565	chr19:54200857-54206565	1	+	54201184	54206565	789624	5	31,122,123,187,13,	0,302,629,5418,5695,
#Partially deleted in new
chr19	54200870	54207522	chr19:54200870-54207522	0	+	54201184	54206565	789624	6	23,122,123,187,172,125,	0,289,616,5405,5682,6527,
#Partially deleted in new
chr19	54200871	54207647	chr19:54200871-54207647	1	+	54201184	54207575	0	5	90,122,123,187,250,	0,288,615,5404,6526,
#Partially deleted in new
chr19	54200871	54207647	chr19:54200871-54207647	1	+	54201184	54206565	789624	5	90,122,123,187,1095,	0,288,615,5404,5681,
#Partially deleted in new
chr19	54200871	54207647	chr19:54200871-54207647	0	+	54201184	54206565	789624	6	90,122,123,187,172,250,	0,288,615,5404,5681,6526,
#Partially deleted in new
chr19	54200873	54207647	chr19:54200873-54207647	1	+	54201184	54207417	789624	4	15,122,123,250,	0,286,613,6524,
#Partially deleted in new
chr19	54200878	54207644	chr19:54200878-54207644	0	+	54200878	54200878	8553170	5	15,122,123,449,247,	0,281,608,5397,6519,
#Partially deleted in new
chr19	54201132	54207647	chr19:54201132-54207647	1	+	54201184	54207575	0	4	149,123,187,250,	0,354,5143,6265,
#Partially deleted in new
chr19	54201159	54207630	chr19:54201159-54207630	1	+	54201184	54206526	789624	3	122,123,1355,	0,327,5116,
#Deleted in new
chr19	54201159	54202008	chr19:54201159-54202008	0	+	54201159	54201159	8553170	2	122,522,	0,327,
#Deleted in new
chr19	54209091	54209418	chr19:54209091-54209418	7	-	54209091	54209091	16724991	1	327,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	54216277	54223506	chr19:54216277-54223506	3	-	54217092	54222976	789624	14	962,156,53,38,76,117,51,303,297,303,285,36,85,86,	0,1041,2083,2367,2485,2851,3877,4250,4805,5550,6000,6469,6665,7143,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	54216673	54222978	chr19:54216673-54222978	0	-	54221782	54222976	789624	14	566,156,53,38,76,117,51,303,297,169,217,285,36,36,	0,645,1687,1971,2089,2455,3481,3854,4409,4944,5240,5604,6073,6269,
#Partially deleted in new
chr19	54216883	54223039	chr19:54216883-54223039	1	-	54217092	54222976	789624	14	356,156,53,38,76,117,39,48,303,297,303,285,36,97,	0,435,1477,1761,1879,2245,2604,2985,3644,4199,4944,5394,5863,6059,
#Partially deleted in new
chr19	54216927	54222978	chr19:54216927-54222978	1	-	54217092	54222976	789624	13	312,159,53,38,76,117,51,303,297,303,285,36,36,	0,391,1433,1717,1835,2201,3227,3600,4155,4900,5350,5819,6015,
#Partially deleted in new
chr19	54217095	54217698	chr19:54217095-54217698	0	-	54217095	54217095	8553170	2	144,380,	0,223,
#Partially deleted in new
chr19	54217119	54220790	chr19:54217119-54220790	0	-	54217119	54217119	8553170	8	120,156,53,38,104,117,51,263,	0,199,1241,1525,1643,2009,3035,3408,
#Partially deleted in new
chr19	54218594	54219355	chr19:54218594-54219355	0	-	54218594	54218594	8553170	3	88,76,227,	0,168,534,
#Partially deleted in new
chr19	54221977	54223087	chr19:54221977-54223087	0	-	54221977	54221977	8553170	3	153,285,341,	0,300,769,
#Partially deleted in new
chr19	54222010	54223087	chr19:54222010-54223087	0	-	54222010	54222976	789624	4	120,285,36,145,	0,267,736,932,
#Partially deleted in new
chr19	54224522	54224881	chr19:54224522-54224881	3	+	54224522	54224522	8553170	1	359,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	54229035	54230213	chr19:54229035-54230213	7	+	54229035	54229035	16724991	2	538,363,	0,815,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	54236591	54242768	chr19:54236591-54242768	0	-	54241117	54242751	789624	10	602,128,268,51,303,297,217,285,36,51,	0,1894,2230,3309,3682,4239,5070,5434,5927,6126,
#Deleted in new
chr19	54238548	54242791	chr19:54238548-54242791	3	-	54238952	54242751	789624	8	541,51,303,297,303,285,36,74,	0,1352,1725,2282,3027,3477,3970,4169,
#Deleted in new
chr19	54238952	54242751	chr19:54238952-54242751	1	-	54238952	54242751	789624	7	137,303,297,303,285,36,34,	0,1321,1878,2623,3073,3566,3765,
#Deleted in new
chr19	54241037	54242772	chr19:54241037-54242772	0	-	54241037	54241037	8553170	4	90,303,285,254,	0,538,988,1481,
#Partially deleted in new
chr19	54246100	54247322	chr19:54246100-54247322	7	-	54246100	54246100	16724991	3	38,76,105,	0,104,1117,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr19	54249430	54257301	chr19:54249430-54257301	3	-	54250785	54257193	789624	13	1502,53,38,64,117,48,51,303,297,300,285,36,142,	0,2623,2935,3055,3440,4587,4934,5304,5855,6612,7058,7530,7729,
#Partially deleted in new
chr19	54250424	54257292	chr19:54250424-54257292	0	-	54250424	54250424	8553170	12	745,53,38,64,1198,51,303,297,300,169,36,133,	0,1629,1941,2061,2446,3940,4310,4861,5618,6064,6536,6735,
#Partially deleted in new
chr19	54250466	54257262	chr19:54250466-54257262	1	-	54250785	54257193	789624	12	466,53,38,64,117,51,51,303,297,285,36,103,	0,1587,1899,2019,2404,3551,3898,4268,4819,6022,6494,6693,
#Partially deleted in new
chr19	54250495	54257264	chr19:54250495-54257264	1	-	54250785	54257193	789624	13	437,53,38,64,117,51,51,303,297,300,285,36,105,	0,1558,1870,1990,2375,3522,3869,4239,4790,5547,5993,6465,6664,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	54250545	54257245	chr19:54250545-54257245	0	-	54250545	54250545	8553170	3	4492,297,757,	0,4740,5943,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	54263950	54264053	chr19:54263950-54264053	3	-	54263950	54263950	8553170	1	103,	0,
#Deleted in new
chr19	54268004	54269045	chr19:54268004-54269045	7	+	54268004	54268004	16724991	2	528,121,	0,920,
#Partially deleted in new
chr19	54273820	54280883	chr19:54273820-54280883	1	-	54274682	54280496	0	14	1009,53,38,76,123,48,51,303,297,303,285,36,82,80,	0,2130,2443,2560,2986,3729,4068,4439,4991,5524,5970,6443,6642,6983,
#Partially deleted in new
chr19	54273821	54281178	chr19:54273821-54281178	1	-	54274682	54279797	0	13	1008,53,38,76,123,51,51,303,297,303,170,82,218,	0,2129,2442,2559,2985,3728,4067,4438,4990,5523,5969,6641,7139,
#Partially deleted in new
chr19	54274351	54281184	chr19:54274351-54281184	1	-	54274682	54280496	0	14	478,53,38,76,123,48,51,303,297,303,285,36,82,224,	0,1599,1912,2029,2455,3198,3537,3908,4460,4993,5439,5912,6111,6609,
#Partially deleted in new
chr19	54274465	54280498	chr19:54274465-54280498	1	-	54275991	54280496	0	12	364,53,38,123,51,51,303,297,303,285,36,36,	0,1485,1798,2341,3084,3423,3794,4346,4879,5325,5798,5997,
#Partially deleted in new
chr19	54274465	54281184	chr19:54274465-54281184	3	-	54274682	54280496	0	14	364,53,38,76,123,51,51,303,297,303,285,36,82,224,	0,1485,1798,1915,2341,3084,3423,3794,4346,4879,5325,5798,5997,6495,
#Partially deleted in new
chr19	54274465	54278544	chr19:54274465-54278544	0	-	54276255	54278544	789624	8	364,53,55,76,123,51,51,285,	0,1485,1781,1915,2341,3084,3423,3794,
#Partially deleted in new
chr19	54274465	54281097	chr19:54274465-54281097	0	-	54274465	54274465	8553170	13	364,53,38,76,794,51,303,297,303,285,36,82,137,	0,1485,1798,1915,2341,3423,3794,4346,4879,5325,5798,5997,6495,
#Deleted in new
chr19	54279849	54280461	chr19:54279849-54280461	0	-	54279849	54279849	8553170	2	226,198,	0,414,
#Deleted in new
chr19	54282108	54282180	chr19:54282108-54282180	3	+	54282108	54282108	5263520	1	72,	0,
#Deleted in new
chr19	54294048	54294366	chr19:54294048-54294366	7	-	54294048	54294048	16724991	2	119,51,	0,267,
#Deleted in new
chr19	54296193	54296252	chr19:54296193-54296252	7	-	54296193	54296193	16724991	1	59,	0,
#Deleted in new
chr19	54298104	54298814	chr19:54298104-54298814	7	-	54298104	54298104	16724991	3	286,36,34,	0,478,676,
#Partially deleted in new
chr19	54301757	54306026	chr19:54301757-54306026	7	-	54301757	54301757	16724991	2	118,286,	0,3983,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	54307069	54313139	chr19:54307069-54313139	3	-	54307412	54313019	0	7	480,51,303,285,36,85,123,	0,628,4344,4794,5265,5467,5947,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	54307253	54313074	chr19:54307253-54313074	1	-	54307412	54313019	0	6	296,51,303,285,85,58,	0,444,4160,4610,5283,5763,
#Partially deleted in new
chr19	54307458	54311663	chr19:54307458-54311663	0	-	54307458	54307458	8553170	2	290,250,	0,3955,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	54308914	54337168	chr19:54308914-54337168	3	-	54308914	54308914	8553170	8	657,239,85,167,156,51,51,328,	0,1389,3622,11505,21185,23602,25000,27926,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	54311164	54313091	chr19:54311164-54313091	0	-	54311164	54311164	8553170	4	552,285,85,75,	0,699,1372,1852,
#Deleted in new
chr19	54311282	54313098	chr19:54311282-54313098	0	-	54311282	54311282	8553170	5	434,285,36,85,82,	0,581,1052,1254,1734,
#Deleted in new
chr19	54320203	54321212	chr19:54320203-54321212	7	-	54320203	54320203	16724991	1	1009,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	54328271	54331434	chr19:54328271-54331434	7	-	54328271	54328271	16724991	5	274,221,297,141,134,	0,1311,1828,2273,3029,
#Partially deleted in new
chr19	54333184	54339150	chr19:54333184-54339150	3	-	54333571	54339093	789624	8	581,51,303,297,300,285,36,91,	0,730,3656,4215,4751,5211,5681,5875,
#Deleted in new
chr19	54336771	54337448	chr19:54336771-54337448	0	-	54336771	54337448	789624	2	372,49,	0,628,
#Deleted in new
chr19	54338211	54339105	chr19:54338211-54339105	0	-	54338211	54338211	8553170	3	24,285,240,	0,184,654,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	54351383	54364957	chr19:54351383-54364957	3	-	54355267	54364804	0	10	4031,53,38,43,129,39,51,294,36,187,	0,4570,4846,4972,5107,5544,8638,9532,12911,13387,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	54353623	54370558	chr19:54353623-54370558	1	-	54355267	54370277	789624	9	1791,53,38,43,129,39,51,294,297,	0,2330,2606,2732,2867,3304,6398,7292,16638,
#Partially deleted in new
chr19	54354674	54364865	chr19:54354674-54364865	1	-	54355267	54364804	0	9	740,53,38,43,129,39,294,36,95,	0,1279,1555,1681,1816,2253,6241,9620,10096,
#Partially deleted in new
chr19	54354674	54364995	chr19:54354674-54364995	1	-	54355267	54364804	789624	10	740,53,38,43,129,39,51,291,36,225,	0,1279,1555,1681,1816,2253,5347,6241,9620,10096,
#Partially deleted in new
chr19	54354674	54357347	chr19:54354674-54357347	0	-	54354674	54354674	8553170	5	740,53,38,43,857,	0,1279,1555,1681,1816,
#Partially deleted in new
chr19	54355200	54361193	chr19:54355200-54361193	0	-	54355200	54355200	8553170	7	214,53,169,129,39,51,184,	0,753,1029,1290,1727,4821,5809,
#Partially deleted in new
chr19	54355257	54364870	chr19:54355257-54364870	0	-	54356595	54364804	789624	10	157,53,38,43,129,39,51,200,36,100,	0,696,972,1098,1233,1670,4764,5752,9037,9513,
#Partially deleted in new
chr19	54355266	54364807	chr19:54355266-54364807	0	-	54355266	54355266	8553170	9	148,53,169,129,39,51,294,36,37,	0,687,963,1224,1661,4755,5649,9028,9504,
#Partially deleted in new
chr19	54355266	54364807	chr19:54355266-54364807	1	-	54355267	54364804	0	9	148,53,38,43,129,39,291,36,37,	0,687,963,1089,1224,1661,5649,9028,9504,
#Partially deleted in new
chr19	54355345	54364836	chr19:54355345-54364836	0	-	54355345	54355345	789624	10	69,53,38,43,129,39,230,200,192,66,	0,608,884,1010,1145,1582,4497,5664,8949,9425,
#Partially deleted in new
chr19	54355979	54365090	chr19:54355979-54365090	0	-	54355979	54355979	8553170	9	27,38,43,129,39,51,200,36,61,	0,250,376,511,948,4042,5030,8315,9050,
#Partially deleted in new
chr19	54356236	54364867	chr19:54356236-54364867	0	-	54356919	54364804	789624	8	31,43,129,255,51,294,36,97,	0,119,254,475,3785,4679,8058,8534,
#Partially deleted in new
chr19	54356285	54357629	chr19:54356285-54357629	0	-	54356285	54356285	8553170	3	113,129,702,	0,205,642,
#Partially deleted in new
chr19	54356556	54365099	chr19:54356556-54365099	0	-	54356556	54356556	8553170	6	63,39,51,291,36,70,	0,371,3465,4359,7738,8473,
#Partially deleted in new
chr19	54356584	54364931	chr19:54356584-54364931	0	-	54361178	54364804	789624	6	35,39,51,328,36,161,	0,343,3437,4331,7710,8186,
#Partially deleted in new
chr19	54356607	54364931	chr19:54356607-54364931	0	-	54361178	54364804	789624	6	12,39,51,234,36,161,	0,320,3414,4402,7687,8163,
#Partially deleted in new
chr19	54358005	54360949	chr19:54358005-54360949	0	-	54358470	54360949	789624	3	620,51,34,	0,2016,2910,
#Partially deleted in new
chr19	54360694	54365114	chr19:54360694-54365114	0	-	54360694	54360694	8553170	4	40,294,192,344,	0,221,3600,4076,
#Partially deleted in new
chr19	54360799	54364849	chr19:54360799-54364849	0	-	54360799	54360799	8553170	3	444,36,79,	0,3495,3971,
#Partially deleted in new
chr19	54360958	54364931	chr19:54360958-54364931	0	-	54360958	54360958	8553170	3	285,192,161,	0,3336,3812,
#Partially deleted in new
chr19	54360959	54368599	chr19:54360959-54368599	0	-	54360959	54360959	8553170	3	250,36,288,	0,3335,7352,
#Partially deleted in new
chr19	54360981	54370491	chr19:54360981-54370491	0	-	54360981	54370277	789624	3	228,36,230,	0,3313,9280,
#Partially deleted in new
chr19	54368188	54368700	chr19:54368188-54368700	0	-	54368188	54368188	8553170	1	512,	0,
#Partially deleted in new
chr19	54379488	54379960	chr19:54379488-54379960	7	+	54379488	54379488	16724991	1	472,	0,
#Partially deleted in new
chr19	54415218	54422255	chr19:54415218-54422255	0	+	54415252	54422255	789624	5	76,72,179,112,66,	0,388,3909,6058,6971,
#Partially deleted in new
chr19	54415430	54436900	chr19:54415430-54436900	3	+	54415552	54436129	789624	14	248,179,112,221,96,73,76,56,93,93,143,46,84,568,	0,3697,5846,6759,11242,13876,14451,15119,15382,15668,20111,20397,20657,20902,
#Partially deleted in new
chr19	54415449	54436719	chr19:54415449-54436719	1	+	54415552	54436129	789624	14	229,179,112,221,96,73,76,56,93,93,143,46,81,387,	0,3678,5827,6740,11223,13857,14432,15100,15363,15649,20092,20378,20641,20883,
#Partially deleted in new
chr19	54415464	54426728	chr19:54415464-54426728	0	+	54415552	54426728	789624	7	214,11,136,179,112,221,56,	0,591,1324,3663,5812,6725,11208,
#Partially deleted in new
chr19	54415509	54426768	chr19:54415509-54426768	0	+	54415552	54422226	789624	4	169,179,221,96,	0,3618,6680,11163,
#Partially deleted in new
chr19	54415511	54436719	chr19:54415511-54436719	0	+	54415511	54415511	8553170	15	167,869,179,112,221,96,73,76,56,93,93,143,46,81,387,	0,544,3616,5765,6678,11161,13795,14370,15038,15301,15587,20030,20316,20579,20821,
#Partially deleted in new
chr19	54415525	54436719	chr19:54415525-54436719	1	+	54415552	54436366	789624	13	153,179,112,221,96,73,76,56,93,93,143,81,387,	0,3602,5751,6664,11147,13781,14356,15024,15287,15573,20016,20565,20807,
#Partially deleted in new
chr19	54415839	54422248	chr19:54415839-54422248	0	+	54415839	54415839	8553170	4	172,175,112,59,	0,3288,5437,6350,
#Deleted in new
chr19	54418261	54419536	chr19:54418261-54419536	0	+	54418261	54418261	8553170	3	451,179,86,	0,866,1189,
#Partially deleted in new
chr19	54418388	54421343	chr19:54418388-54421343	0	+	54418388	54418388	8553170	3	324,175,67,	0,739,2888,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	54419195	54433711	chr19:54419195-54433711	0	+	54419195	54419310	789624	9	347,112,212,96,73,76,56,93,2613,	0,2081,3003,7477,10111,10686,11354,11617,11903,
#Partially deleted in new
chr19	54420667	54426733	chr19:54420667-54426733	0	+	54420667	54420667	8553170	4	165,112,221,61,	0,609,1522,6005,
#Partially deleted in new
chr19	54420698	54429353	chr19:54420698-54429353	0	+	54420698	54420698	8553170	5	103,112,221,96,47,	0,578,1491,5974,8608,
#Partially deleted in new
chr19	54426473	54436719	chr19:54426473-54436719	0	+	54426473	54426473	8553170	11	93,96,73,76,56,93,93,143,46,84,387,	0,199,2833,3408,4076,4339,4625,9068,9354,9614,9859,
#Partially deleted in new
chr19	54430653	54434698	chr19:54430653-54434698	3	-	54430653	54430653	8553170	2	472,57,	0,3988,
#Partially deleted in new
chr19	54430812	54436472	chr19:54430812-54436472	0	+	54430812	54430812	8553170	5	93,93,143,46,382,	0,286,4729,5015,5278,
#Deleted in new
chr19	54434182	54434665	chr19:54434182-54434665	3	+	54434182	54434182	8553170	1	483,	0,
#Deleted in new
chr19	54434959	54436328	chr19:54434959-54436328	0	+	54434959	54434959	8553170	4	154,143,46,238,	0,582,868,1131,
#Deleted in new
chr19	54436004	54436717	chr19:54436004-54436717	0	+	54436004	54436004	8553170	2	167,385,	0,328,
#Partially deleted in new
chr19	54438009	54438346	chr19:54438009-54438346	3	-	54438009	54438009	8553170	1	337,	0,
#Partially deleted in new
chr19	54438664	54439544	chr19:54438664-54439544	3	-	54438664	54438664	8553170	1	880,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	54444812	54449014	chr19:54444812-54449014	3	-	54444812	54444812	789624	3	367,51,453,	0,3352,3749,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	54445035	54448602	chr19:54445035-54448602	1	-	54445035	54445035	8553170	2	144,438,	0,3129,
#Deleted in new
chr19	54446829	54447047	chr19:54446829-54447047	7	+	54446829	54446829	16724991	1	218,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	54448164	54449045	chr19:54448164-54449045	0	-	54448164	54448164	8553170	2	51,413,	0,468,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr19	54448886	54462037	chr19:54448886-54462037	3	+	54451344	54460928	789624	16	424,93,175,102,111,253,142,204,279,141,286,102,69,130,208,1272,	0,2403,3206,3764,4659,5543,6064,6477,7080,7438,7749,8860,9047,9216,9427,11879,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr19	54448886	54461832	chr19:54448886-54461832	1	+	54451344	54461832	789624	16	424,93,175,102,253,142,204,279,141,286,102,69,130,254,141,30,	0,2403,3206,3764,5543,6064,6477,7080,7438,7749,8860,9047,9216,9427,12665,12916,
#Partially deleted in new
chr19	54449189	54455443	chr19:54449189-54455443	0	+	54451344	54455443	789624	8	117,93,175,102,111,253,142,80,	0,2100,2903,3461,4356,5240,5761,6174,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	54449223	54461400	chr19:54449223-54461400	1	+	54451344	54458906	789624	14	83,93,175,102,253,142,204,279,141,286,102,69,130,3087,	0,2066,2869,3427,5206,5727,6140,6743,7101,7412,8523,8710,8879,9090,
#Partially deleted in new
chr19	54449227	54452716	chr19:54449227-54452716	0	+	54452108	54452716	789624	3	79,175,66,	0,2865,3423,
#Partially deleted in new
chr19	54449611	54452712	chr19:54449611-54452712	0	+	54451344	54452712	789624	4	133,93,175,62,	0,1678,2481,3039,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	54451289	54462015	chr19:54451289-54462015	1	+	54451344	54458906	789624	14	93,175,102,111,253,142,204,279,141,286,102,69,130,3702,	0,803,1361,2256,3140,3661,4074,4677,5035,5346,6457,6644,6813,7024,
#Deleted in new
chr19	54451991	54453623	chr19:54451991-54453623	0	+	54451991	54451991	8553170	3	276,102,78,	0,659,1554,
#Partially deleted in new
chr19	54458414	54461712	chr19:54458414-54461712	0	+	54458414	54461454	789624	2	107,487,	0,2811,
#Deleted in new
chr19	54461795	54463711	chr19:54461795-54463711	3	-	54462089	54463526	789624	1	1916,	0,
#Partially deleted in new
chr19	54465025	54473264	chr19:54465025-54473264	3	-	54465100	54465547	789624	3	522,141,201,	0,6519,8038,
#Partially deleted in new
chr19	54471505	54473171	chr19:54471505-54473171	0	-	54471505	54471505	8553170	2	180,108,	0,1558,
#Partially deleted in new
chr19	54497878	54508106	chr19:54497878-54508106	0	+	54498241	54508106	789624	3	379,36,216,	0,5821,10012,
#Partially deleted in new
chr19	54497878	54508106	chr19:54497878-54508106	0	+	54498241	54508106	789624	2	379,216,	0,10012,
#Partially deleted in new
chr19	54502796	54510687	chr19:54502796-54510687	3	+	54502918	54510569	789624	5	156,36,294,51,162,	0,903,5094,6238,7729,
#Partially deleted in new
chr19	54502906	54510687	chr19:54502906-54510687	1	+	54502918	54510569	789624	4	46,36,294,162,	0,793,4984,7619,
#Deleted in new
chr19	54521722	54522031	chr19:54521722-54522031	7	+	54521722	54521722	16724991	1	309,	0,
#Partially deleted in new
chr19	54532691	54543815	chr19:54532691-54543815	5	+	54532691	54532691	16724991	8	140,36,279,261,51,123,53,279,	0,351,1040,4210,5283,9832,10684,10845,
#Partially deleted in new
chr19	54532691	54543815	chr19:54532691-54543815	5	+	54532691	54532691	16724991	8	140,36,279,261,51,123,164,279,	0,351,1040,4210,5283,9832,10573,10845,
#Partially deleted in new
chr19	54532691	54543815	chr19:54532691-54543815	5	+	54532691	54532691	16724991	8	140,36,279,279,51,123,53,279,	0,351,1040,4192,5283,9832,10684,10845,
#Partially deleted in new
chr19	54532691	54543815	chr19:54532691-54543815	5	+	54532691	54532691	16724991	7	387,279,261,51,123,53,279,	0,1040,4210,5283,9832,10684,10845,
#Partially deleted in new
chr19	54532691	54543815	chr19:54532691-54543815	5	+	54532691	54532691	16724991	8	387,279,62,261,51,123,53,279,	0,1040,2894,4210,5283,9832,10684,10845,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	54532759	54545771	chr19:54532759-54545771	7	+	54532759	54532759	16724991	8	72,36,279,306,293,51,53,2235,	0,283,972,2826,4110,5215,10616,10777,
#Partially deleted in new
chr19	54532790	54543732	chr19:54532790-54543732	4	+	54532790	54532790	16724991	9	41,36,279,306,293,51,123,53,196,	0,252,941,2795,4079,5184,9733,10585,10746,
#Partially deleted in new
chr19	54532797	54543728	chr19:54532797-54543728	5	+	54532797	54532797	16724991	9	34,36,279,306,293,51,123,53,192,	0,245,934,2788,4072,5177,9726,10578,10739,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	54535277	54545739	chr19:54535277-54545739	4	+	54535277	54535277	16724991	4	614,293,686,2711,	0,1592,2697,7751,
#Deleted in new
chr19	54551969	54552256	chr19:54551969-54552256	7	+	54551969	54551969	16724991	1	287,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	54572919	54574910	chr19:54572919-54574910	0	+	54572919	54572919	8553170	4	516,36,282,180,	0,1156,1381,1811,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	54573027	54575836	chr19:54573027-54575836	0	+	54573878	54575836	789624	7	408,215,36,282,303,297,30,	0,670,1048,1273,1703,2228,2779,
#Partially deleted in new
chr19	54573350	54587560	chr19:54573350-54587560	1	+	54573878	54587346	0	9	85,82,36,282,303,297,303,51,360,	0,480,725,950,1380,1905,2456,13659,13850,
#Partially deleted in new
chr19	54573789	54587558	chr19:54573789-54587558	1	+	54573878	54587346	0	8	123,36,282,303,297,303,51,358,	0,286,511,941,1466,2017,13220,13411,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	54573791	54590287	chr19:54573791-54590287	3	+	54573878	54587346	0	7	121,36,282,303,297,303,3087,	0,284,509,939,1464,2015,13409,
#Partially deleted in new
chr19	54573840	54587395	chr19:54573840-54587395	1	+	54573878	54587346	789624	6	72,282,303,297,303,195,	0,460,890,1415,1966,13360,
#Partially deleted in new
chr19	54573878	54587395	chr19:54573878-54587395	1	+	54573878	54587346	789624	5	34,36,244,152,195,	0,197,422,2079,13322,
#Partially deleted in new
chr19	54576071	54587547	chr19:54576071-54587547	0	+	54576071	54577682	789624	3	38,259,347,	0,1393,11129,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	54589440	54590287	chr19:54589440-54590287	3	+	54589440	54589440	8553170	1	847,	0,
#Partially deleted in new
chr19	54593581	54601877	chr19:54593581-54601877	0	+	54593581	54593581	789624	9	200,36,288,303,181,303,51,39,1179,	0,859,1083,1518,2173,2607,5654,6930,7117,
#Partially deleted in new
chr19	54593581	54599720	chr19:54593581-54599720	0	+	54593581	54593581	789624	7	200,36,288,303,297,303,485,	0,859,1083,1518,2057,2607,5654,
#Partially deleted in new
chr19	54593647	54601075	chr19:54593647-54601075	3	+	54594244	54600817	789624	10	134,82,36,288,303,297,303,51,39,377,	0,549,793,1017,1452,1991,2541,5588,6864,7051,
#Partially deleted in new
chr19	54593649	54599716	chr19:54593649-54599716	0	+	54593649	54593649	789624	7	132,280,288,303,297,303,481,	0,547,1015,1450,1989,2539,5586,
#Partially deleted in new
chr19	54593659	54602090	chr19:54593659-54602090	1	+	54594244	54600817	789624	8	122,82,36,288,303,51,39,1392,	0,537,781,1005,1440,5576,6852,7039,
#Deleted in new
chr19	54607869	54608376	chr19:54607869-54608376	7	+	54607869	54607869	16724991	2	36,283,	0,224,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr19	54617157	54637528	chr19:54617157-54637528	1	+	54631073	54636878	789624	16	192,117,82,36,288,303,297,303,51,48,123,76,38,53,156,797,	0,13359,13868,14113,14342,14777,15306,15858,16480,16816,17483,17946,18101,18399,19339,19574,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	54630409	54637528	chr19:54630409-54637528	1	+	54631073	54636878	789624	15	224,82,36,288,303,297,303,51,51,123,76,38,53,156,797,	0,616,861,1090,1525,2054,2606,3228,3561,4231,4694,4849,5147,6087,6322,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	54630511	54637528	chr19:54630511-54637528	1	+	54631073	54636878	789624	15	122,82,36,288,303,297,303,51,48,123,76,38,53,159,797,	0,514,759,988,1423,1952,2504,3126,3462,4129,4592,4747,5045,5982,6220,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr19	54630516	54637528	chr19:54630516-54637528	3	+	54631073	54636878	789624	15	117,82,36,288,303,297,303,51,51,123,76,38,53,159,797,	0,509,754,983,1418,1947,2499,3121,3454,4124,4587,4742,5040,5977,6215,
#Deleted in new
chr19	54630632	54637190	chr19:54630632-54637190	1	+	54630965	54636878	789624	15	475,36,288,303,297,303,51,51,39,123,76,38,53,159,459,	0,638,867,1302,1831,2383,3005,3338,3731,4008,4471,4626,4924,5861,6099,
#Deleted in new
chr19	54631073	54637076	chr19:54631073-54637076	1	+	54631073	54636878	789624	14	34,36,288,303,297,303,51,51,123,76,38,53,159,345,	0,197,426,861,1390,1942,2564,2897,3567,4030,4185,4483,5420,5658,
#Deleted in new
chr19	54631073	54637076	chr19:54631073-54637076	1	+	54631073	54636878	789624	13	34,36,288,303,297,303,51,123,76,38,53,156,345,	0,197,426,861,1390,1942,2897,3567,4030,4185,4483,5423,5658,
#Deleted in new
chr19	54631073	54637076	chr19:54631073-54637076	0	+	54631073	54635568	789624	13	34,36,288,303,297,303,51,48,123,38,53,156,345,	0,197,426,861,1390,1942,2564,2900,3567,4185,4483,5423,5658,
#Deleted in new
chr19	54631261	54632055	chr19:54631261-54632055	0	+	54631261	54631261	8553170	3	45,288,121,	0,238,673,
#Deleted in new
chr19	54633125	54634183	chr19:54633125-54634183	0	+	54633125	54633125	8553170	3	193,51,213,	0,512,845,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	54633142	54637528	chr19:54633142-54637528	0	+	54633142	54633142	8553170	8	102,51,51,176,76,38,1096,797,	0,495,828,1445,1961,2116,2414,3589,
#Deleted in new
chr19	54634370	54635616	chr19:54634370-54635616	0	+	54634370	54634370	8553170	4	393,76,38,60,	0,733,888,1186,
#Deleted in new
chr19	54634892	54636105	chr19:54634892-54636105	0	+	54634892	54634892	8553170	3	287,38,549,	0,366,664,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	54635721	54638892	chr19:54635721-54638892	3	-	54635721	54635721	8553170	2	355,199,	0,2972,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	54643888	54649600	chr19:54643888-54649600	0	+	54643888	54643888	8553170	2	78,1567,	0,4145,
#Partially deleted in new
chr19	54643914	54663955	chr19:54643914-54663955	0	+	54662910	54663955	789624	4	52,249,36,202,	0,18904,19617,19839,
#Deleted in new
chr19	54645308	54645383	chr19:54645308-54645383	3	+	54645308	54645308	5263520	1	75,	0,
#Partially deleted in new
chr19	54647943	54648853	chr19:54647943-54648853	7	+	54647943	54647943	16724991	1	910,	0,
#Partially deleted in new
chr19	54652084	54652230	chr19:54652084-54652230	7	+	54652084	54652084	16724991	1	146,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr19	54662127	54670359	chr19:54662127-54670359	3	+	54663033	54668019	0	14	61,39,249,36,285,300,51,51,117,76,38,53,159,2487,	0,381,691,1404,1626,2058,2671,3002,3687,4112,4271,4569,5507,5745,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	54662157	54667699	chr19:54662157-54667699	0	+	54662910	54663868	789624	12	31,39,249,205,300,51,51,117,76,38,53,62,	0,351,661,1676,2028,2641,2972,3657,4082,4241,4539,5480,
#Partially deleted in new
chr19	54662994	54668397	chr19:54662994-54668397	1	+	54663033	54668019	789624	12	73,36,285,300,51,51,117,76,38,53,156,525,	0,537,759,1191,1804,2135,2820,3245,3404,3702,4643,4878,
#Partially deleted in new
chr19	54662997	54668397	chr19:54662997-54668397	1	+	54663033	54668019	789624	11	70,36,285,300,51,51,117,76,38,53,525,	0,534,756,1188,1801,2132,2817,3242,3401,3699,4875,
#Partially deleted in new
chr19	54663019	54668397	chr19:54663019-54668397	1	+	54663033	54668019	789624	12	48,36,285,300,51,51,117,76,38,56,159,525,	0,512,734,1166,1779,2110,2795,3220,3379,3674,4615,4853,
#Partially deleted in new
chr19	54663026	54667793	chr19:54663026-54667793	0	+	54663033	54667793	789624	11	41,36,285,300,51,48,117,76,38,53,159,	0,505,727,1159,1772,2106,2788,3213,3372,3670,4608,
#Partially deleted in new
chr19	54665797	54667390	chr19:54665797-54667390	0	+	54665797	54665797	8553170	4	134,76,38,697,	0,442,601,896,
#Partially deleted in new
chr19	54666285	54667038	chr19:54666285-54667038	0	+	54666285	54666285	8553170	3	30,58,342,	0,113,411,
#Partially deleted in new
chr19	54671230	54672591	chr19:54671230-54672591	7	+	54671230	54671230	16724991	3	50,285,244,	0,572,1117,
#Deleted in new
chr19	54696603	54700905	chr19:54696603-54700905	7	+	54696603	54696603	16724991	7	36,285,303,260,303,45,138,	0,176,608,1082,1591,3989,4164,
#Deleted in new
chr19	54703951	54704235	chr19:54703951-54704235	7	+	54703951	54703951	16724991	1	284,	0,
#Deleted in new
chr19	54707915	54713453	chr19:54707915-54713453	7	+	54707915	54707915	16724991	7	523,285,310,297,303,51,358,	0,686,1120,1639,2191,4981,5180,
#Deleted in new
chr19	54708601	54713232	chr19:54708601-54713232	5	+	54708601	54708601	16724991	6	285,310,297,303,51,137,	0,434,953,1505,4295,4494,
#Partially deleted in new
chr19	54724478	54736536	chr19:54724478-54736536	3	+	54724496	54736096	789624	8	52,36,285,300,294,105,53,566,	0,768,1574,3132,5014,10774,11341,11492,
#Partially deleted in new
chr19	54724495	54798285	chr19:54724495-54798285	3	+	54724495	54724495	8553170	6	35,36,285,300,294,344,	0,46353,61967,63702,65529,73446,
#Partially deleted in new
chr19	54738514	54753052	chr19:54738514-54753052	3	+	54738545	54752519	0	8	65,36,300,294,51,105,53,686,	0,992,3465,5280,8820,13134,13701,13852,
#Partially deleted in new
chr19	54755022	54767371	chr19:54755022-54767371	7	+	54755022	54755022	16724991	9	34,36,282,299,294,51,105,53,177,	0,1091,1851,3585,5409,8868,11454,12021,12172,
#Partially deleted in new
chr19	54769810	54784322	chr19:54769810-54784322	3	+	54769850	54783813	789624	8	74,36,300,294,51,102,53,686,	0,1038,3522,5354,8801,13111,13675,13826,
#Partially deleted in new
chr19	54786354	54790318	chr19:54786354-54790318	7	+	54786354	54786354	16724991	3	34,300,294,	0,1843,3670,
#Partially deleted in new
chr19	54803534	54814516	chr19:54803534-54814516	1	+	54803534	54814111	789624	8	157,36,285,294,51,104,54,675,	0,356,1258,2416,5298,9590,10154,10307,
#Partially deleted in new
chr19	54803610	54814517	chr19:54803610-54814517	1	+	54803651	54813701	789624	8	81,36,285,294,51,104,53,676,	0,280,1182,2340,5222,9514,10079,10231,
#Partially deleted in new
chr19	54803639	54814517	chr19:54803639-54814517	3	+	54803651	54814111	789624	7	52,36,285,294,51,53,676,	0,251,1153,2311,5193,10050,10202,
#Partially deleted in new
chr19	54803639	54814517	chr19:54803639-54814517	1	+	54803651	54814111	789624	6	52,36,285,294,53,676,	0,251,1153,2311,10050,10202,
#Partially deleted in new
chr19	54803639	54814517	chr19:54803639-54814517	0	+	54803639	54803639	8553170	7	52,36,285,294,104,53,676,	0,251,1153,2311,9485,10050,10202,
#Partially deleted in new
chr19	54803639	54814517	chr19:54803639-54814517	0	+	54803639	54803639	8553170	5	52,36,285,293,676,	0,251,1153,2311,10202,
#Partially deleted in new
chr19	54803640	54814122	chr19:54803640-54814122	1	+	54803651	54814111	789624	5	51,36,294,53,281,	0,250,2310,10049,10201,
#Partially deleted in new
chr19	54803651	54814393	chr19:54803651-54814393	1	+	54803651	54814111	789624	6	40,36,294,51,53,552,	0,239,2299,5181,10038,10190,
#Partially deleted in new
chr19	54803656	54814517	chr19:54803656-54814517	0	+	54803656	54814111	789624	8	35,36,285,294,51,171,53,676,	0,234,1136,2294,5176,9468,10033,10185,
#Partially deleted in new
chr19	54816467	54830778	chr19:54816467-54830778	3	+	54816500	54830275	0	9	67,36,285,300,294,51,105,53,680,	0,1066,1847,3245,5097,8560,12893,13460,13631,
#Partially deleted in new
chr19	54816486	54830777	chr19:54816486-54830777	1	+	54816500	54830275	789624	8	48,36,285,300,294,105,53,679,	0,1047,1828,3226,5078,12874,13441,13612,
#Partially deleted in new
chr19	54816489	54830778	chr19:54816489-54830778	1	+	54816500	54830275	0	8	45,36,300,294,51,105,53,680,	0,1044,3223,5075,8538,12871,13438,13609,
#Partially deleted in new
chr19	54832675	54848569	chr19:54832675-54848569	3	+	54832764	54847943	8553170	8	123,36,300,272,51,105,53,668,	0,2403,4900,6752,10192,14508,15075,15226,
#Partially deleted in new
chr19	54832764	54847218	chr19:54832764-54847218	0	+	54832764	54847218	789624	5	34,36,300,272,35,	0,2314,4811,6663,14419,
#Partially deleted in new
chr19	54850442	54867207	chr19:54850442-54867207	3	+	54850475	54866731	789624	9	67,36,285,300,294,51,105,53,686,	0,777,1555,3304,5176,8636,15362,15927,16079,
#Partially deleted in new
chr19	54850475	54866960	chr19:54850475-54866960	1	+	54850475	54866731	789624	8	34,36,285,300,294,105,53,439,	0,744,1522,3271,5143,15329,15894,16046,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	54868938	54869045	chr19:54868938-54869045	3	-	54868938	54868938	8553170	1	107,	0,
#Partially deleted in new
chr19	54874247	54889890	chr19:54874247-54889890	1	+	54874289	54889863	0	3	76,291,242,	0,10987,15401,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	54874279	54890472	chr19:54874279-54890472	3	+	54874289	54889863	0	5	44,36,291,288,824,	0,1050,10955,13727,15369,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	54874279	54889067	chr19:54874279-54889067	1	+	54874289	54888365	0	4	44,36,291,1061,	0,1050,10955,13727,
#Partially deleted in new
chr19	54874279	54889863	chr19:54874279-54889863	0	+	54874279	54874279	8553170	4	44,78,291,215,	0,6556,10955,15369,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	54874279	54889067	chr19:54874279-54889067	0	+	54874289	54888365	0	4	44,291,636,92,	0,10955,13727,14696,
#Partially deleted in new
chr19	54874284	54889890	chr19:54874284-54889890	1	+	54874289	54889863	0	4	39,36,291,242,	0,1045,10950,15364,
#Partially deleted in new
chr19	54874284	54889890	chr19:54874284-54889890	1	+	54874289	54889863	0	5	39,36,291,222,242,	0,1045,10950,13722,15364,
#Partially deleted in new
chr19	54874289	54889863	chr19:54874289-54889863	1	+	54874289	54889863	0	3	34,288,215,	0,13717,15359,
#Partially deleted in new
chr19	54874289	54889863	chr19:54874289-54889863	1	+	54874289	54889863	0	4	34,291,288,215,	0,10945,13717,15359,
#Partially deleted in new
chr19	54874289	54889863	chr19:54874289-54889863	1	+	54874289	54889739	0	4	34,291,214,215,	0,10945,13717,15359,
#Partially deleted in new
chr19	54874289	54889863	chr19:54874289-54889863	1	+	54874289	54889863	0	4	34,291,222,215,	0,10945,13717,15359,
#Partially deleted in new
chr19	54874289	54889863	chr19:54874289-54889863	0	+	54874289	54874289	8553170	5	34,36,78,291,215,	0,1040,6546,10945,15359,
#Partially deleted in new
chr19	54874289	54889863	chr19:54874289-54889863	0	+	54874289	54874289	8553170	6	34,36,78,291,222,215,	0,1040,6546,10945,13717,15359,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	54890672	54891420	chr19:54890672-54891420	3	+	54890672	54890672	8553170	1	748,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	54906149	54913073	chr19:54906149-54913073	3	+	54906187	54912871	789624	7	72,36,285,279,48,51,384,	0,149,373,3095,3868,6018,6540,
#Partially deleted in new
chr19	54906154	54909347	chr19:54906154-54909347	0	+	54906154	54906154	8553170	3	180,285,103,	0,368,3090,
#Deleted in new
chr19	54906154	54906778	chr19:54906154-54906778	0	+	54906154	54906154	8553170	2	67,480,	0,144,
#Partially deleted in new
chr19	54906155	54912959	chr19:54906155-54912959	1	+	54906187	54912871	789624	6	66,285,279,48,48,270,	0,367,3089,3862,6015,6534,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	54906162	54916140	chr19:54906162-54916140	1	+	54906187	54912871	789624	8	59,36,285,279,48,48,466,391,	0,136,360,3082,3855,6008,6527,9587,
#Partially deleted in new
chr19	54906180	54912973	chr19:54906180-54912973	1	+	54906187	54912871	789624	6	41,36,285,279,48,284,	0,118,342,3064,3837,6509,
#Partially deleted in new
chr19	54906180	54912973	chr19:54906180-54912973	1	+	54906187	54912871	0	6	41,36,279,48,51,284,	0,118,3064,3837,5987,6509,
#Partially deleted in new
chr19	54906187	54912871	chr19:54906187-54912871	1	+	54906187	54912871	0	5	34,279,48,51,182,	0,3057,3830,5980,6502,
#Partially deleted in new
chr19	54923508	54947505	chr19:54923508-54947505	1	-	54923739	54941711	0	10	364,168,171,171,171,198,1579,75,316,37,	0,6990,10060,10980,12752,14535,15379,17422,17926,23960,
#Partially deleted in new
chr19	54923509	54941750	chr19:54923509-54941750	3	-	54923739	54941711	0	10	363,171,168,171,171,171,114,1579,75,316,	0,4095,6989,10059,10979,12751,14534,15378,17421,17925,
#Partially deleted in new
chr19	54923514	54966243	chr19:54923514-54966243	1	-	54923739	54941711	0	13	358,171,168,171,171,171,198,1579,75,316,37,207,204,	0,4090,6984,10054,10974,12746,14529,15373,17416,17920,23954,24128,42525,
#Partially deleted in new
chr19	54923514	54941752	chr19:54923514-54941752	1	-	54923739	54941711	0	9	358,168,171,171,171,198,1579,75,318,	0,6984,10054,10974,12746,14529,15373,17416,17920,
#Partially deleted in new
chr19	54923651	54947497	chr19:54923651-54947497	0	-	54927656	54941711	789624	11	221,134,168,171,171,171,198,1579,75,316,29,	0,3953,6847,9917,10837,12609,14392,15236,17279,17783,23817,
#Partially deleted in new
chr19	54923652	54947497	chr19:54923652-54947497	1	-	54923739	54941711	0	11	220,171,168,171,171,171,198,1579,75,316,29,	0,3952,6846,9916,10836,12608,14391,15235,17278,17782,23816,
#Partially deleted in new
chr19	54940992	54966253	chr19:54940992-54966253	0	-	54940992	54941711	789624	3	13,316,214,	0,442,25047,
#Partially deleted in new
chr19	54941501	54966312	chr19:54941501-54966312	0	-	54941501	54941711	789624	3	249,37,273,	0,5967,24538,
#Partially deleted in new
chr19	54941550	54966243	chr19:54941550-54966243	0	-	54941550	54941711	789624	4	200,37,127,204,	0,5918,6081,24489,
#Partially deleted in new
chr19	54948863	54948993	chr19:54948863-54948993	7	+	54948863	54948863	16724991	1	130,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	54953129	54981639	chr19:54953129-54981639	0	+	54970015	54981639	789624	5	156,297,45,72,23,	0,16869,21370,24622,28487,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	54953167	54977799	chr19:54953167-54977799	0	+	54970015	54977799	789624	4	202,297,45,48,	0,16831,21332,24584,
#Partially deleted in new
chr19	54965069	54981682	chr19:54965069-54981682	0	+	54970015	54981682	789624	5	60,297,45,72,66,	0,4929,9430,12682,16547,
#Partially deleted in new
chr19	54965251	55001142	chr19:54965251-55001142	3	+	54970015	55000898	789624	13	126,297,45,72,66,1567,171,165,171,171,171,171,383,	0,4747,9248,12500,16365,16910,19795,20899,24770,25250,29017,32065,35508,
#Partially deleted in new
chr19	54965284	55001142	chr19:54965284-55001142	0	+	54965284	54965284	789624	13	93,297,45,72,66,1567,171,165,372,171,171,171,383,	0,4714,9215,12467,16332,16877,19762,20866,24737,25217,28984,32032,35475,
#Partially deleted in new
chr19	54965328	55001135	chr19:54965328-55001135	1	+	54970015	55000898	789624	12	49,297,45,66,1567,171,165,171,171,171,171,376,	0,4670,9171,16288,16833,19718,20822,24693,25173,28940,31988,35431,
#Partially deleted in new
chr19	54965335	55001138	chr19:54965335-55001138	1	+	54970015	55000898	789624	12	42,297,45,72,1567,171,165,171,171,171,171,379,	0,4663,9164,12416,16826,19711,20815,24686,25166,28933,31981,35424,
#Partially deleted in new
chr19	54966342	55001140	chr19:54966342-55001140	1	+	54970015	55000898	789624	13	125,297,45,72,66,1567,171,165,171,171,171,171,381,	0,3656,8157,11409,15274,15819,18704,19808,23679,24159,27926,30974,34417,
#Partially deleted in new
chr19	54966342	55001140	chr19:54966342-55001140	1	+	54970015	55000898	789624	12	125,297,45,72,1567,171,165,171,171,171,171,381,	0,3656,8157,11409,15819,18704,19808,23679,24159,27926,30974,34417,
#Partially deleted in new
chr19	54966373	55001078	chr19:54966373-55001078	1	+	54970015	55000898	789624	14	94,155,73,45,72,66,1567,171,165,171,171,171,171,319,	0,3625,3849,8126,11378,15243,15788,18673,19777,23648,24128,27895,30943,34386,
#Partially deleted in new
chr19	54966373	54982311	chr19:54966373-54982311	0	+	54970222	54982311	789624	6	98,145,45,72,66,150,	0,3777,8126,11378,15243,15788,
#Partially deleted in new
chr19	54966405	55001135	chr19:54966405-55001135	1	+	54970015	55000898	789624	13	62,297,45,72,57,1567,171,165,171,171,171,171,376,	0,3593,8094,11346,15220,15756,18641,19745,23616,24096,27863,30911,34354,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	54973816	54974417	chr19:54973816-54974417	7	+	54973816	54973816	16724991	2	244,63,	0,538,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	54973993	54982397	chr19:54973993-54982397	0	+	54974048	54982397	789624	5	131,45,72,66,236,	0,506,3758,7623,8168,
#Partially deleted in new
chr19	54983485	54986401	chr19:54983485-54986401	0	+	54983485	54986328	789624	3	243,171,251,	0,1561,2665,
#Partially deleted in new
chr19	54986205	54994440	chr19:54986205-54994440	0	+	54986205	54990296	789624	5	110,75,179,171,172,	0,3816,4009,4296,8063,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	54986291	54990206	chr19:54986291-54990206	0	+	54986291	54989560	789624	3	24,196,185,	0,3265,3730,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	54990625	54991549	chr19:54990625-54991549	0	+	54990625	54990625	8553170	2	540,50,	0,874,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	54993217	55001138	chr19:54993217-55001138	0	+	54993217	54993217	8553170	3	1222,171,379,	0,4099,7542,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	55006192	55048086	chr19:55006192-55048086	3	+	55006192	55006192	8553170	5	107,48,121,425,85,	0,224,36607,40281,41809,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	55006204	55043251	chr19:55006204-55043251	1	+	55006204	55006204	8553170	3	85,48,420,	0,212,36627,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	55013704	55038264	chr19:55013704-55038264	3	-	55014081	55038236	0	8	1461,55,60,54,285,258,33,62,	0,1974,4947,11513,13873,18434,18801,24498,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	55013704	55038264	chr19:55013704-55038264	1	-	55014920	55038236	0	7	1461,51,60,285,258,33,62,	0,1978,4947,13873,18434,18801,24498,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	55013704	55038264	chr19:55013704-55038264	1	-	55014920	55038236	0	8	1461,51,60,54,285,258,33,62,	0,1978,4947,11513,13873,18434,18801,24498,
#Partially deleted in new
chr19	55014525	55018819	chr19:55014525-55018819	0	-	55014525	55014525	8553170	3	640,51,168,	0,1157,4126,
#Partially deleted in new
chr19	55027592	55053928	chr19:55027592-55053928	3	-	55027592	55027592	8553170	6	270,405,102,213,105,176,	0,17312,19794,20736,21066,26160,
#Partially deleted in new
chr19	55027604	55032865	chr19:55027604-55032865	0	-	55027604	55032232	789624	3	258,258,360,	0,4534,4901,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	55027621	55044317	chr19:55027621-55044317	1	+	55027621	55027621	8553170	3	44,89,213,	0,15210,16483,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	55039107	55043107	chr19:55039107-55043107	0	-	55039107	55039107	8553170	2	157,2654,	0,1346,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	55039110	55041889	chr19:55039110-55041889	0	-	55039110	55039110	8553170	3	615,712,644,	0,1202,2135,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	55039110	55063076	chr19:55039110-55063076	0	-	55056765	55063032	789624	4	327,759,133,109,	0,2135,17565,23857,
#Partially deleted in new
chr19	55042038	55044949	chr19:55042038-55044949	0	-	55042038	55042038	8553170	2	98,45,	0,2866,
#Partially deleted in new
chr19	55044323	55063217	chr19:55044323-55063217	1	-	55045073	55056779	789624	7	986,102,213,105,156,119,250,	0,3063,4005,4335,12329,14833,18644,
#Partially deleted in new
chr19	55044342	55063833	chr19:55044342-55063833	0	-	55048252	55063032	789624	8	967,384,212,213,105,156,119,866,	0,2762,3703,3986,4316,12310,14814,18625,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	55044342	55069529	chr19:55044342-55069529	1	-	55045073	55056779	789624	8	967,102,213,105,156,119,117,208,	0,3044,3986,4316,12310,14814,19953,24979,
#Partially deleted in new
chr19	55044342	55063176	chr19:55044342-55063176	3	-	55045073	55063032	789624	7	967,102,213,105,156,119,209,	0,3044,3986,4316,12310,14814,18625,
#Partially deleted in new
chr19	55044854	55063086	chr19:55044854-55063086	0	-	55048252	55063032	789624	8	455,102,212,213,105,156,119,119,	0,2532,3191,3474,3804,11798,14302,18113,
#Partially deleted in new
chr19	55047412	55063148	chr19:55047412-55063148	0	-	55056765	55063032	789624	5	76,213,105,156,181,	0,916,1246,9240,15555,
#Partially deleted in new
chr19	55048656	55059174	chr19:55048656-55059174	0	-	55048656	55048656	8553170	4	107,303,156,18,	0,2043,7996,10500,
#Partially deleted in new
chr19	55050873	55063119	chr19:55050873-55063119	0	-	55050873	55050873	8553170	4	129,156,119,152,	0,5779,8283,12094,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	55063270	55069520	chr19:55063270-55069520	0	-	55063270	55063270	8553170	4	101,136,117,199,	0,593,1025,6051,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	55063751	55069491	chr19:55063751-55069491	0	-	55063751	55063751	8553170	3	248,117,170,	0,544,5570,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	55063900	55069531	chr19:55063900-55069531	0	-	55063900	55063900	8553170	2	512,210,	0,5421,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	55063947	55071291	chr19:55063947-55071291	0	-	55063947	55063947	8553170	2	465,129,	0,7215,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	55064039	55069892	chr19:55064039-55069892	0	-	55064039	55064039	8553170	2	373,199,	0,5654,
#Partially deleted in new
chr19	55067194	55069502	chr19:55067194-55069502	0	-	55067194	55067194	8553170	2	521,181,	0,2127,
#Partially deleted in new
chr19	55072019	55087919	chr19:55072019-55087919	1	+	55072197	55087614	789624	12	241,162,150,83,262,127,89,75,149,267,133,392,	0,7670,8109,8752,9211,9753,10072,10255,10434,11358,13821,15508,
#Partially deleted in new
chr19	55075852	55083985	chr19:55075852-55083985	0	+	55075852	55075852	8553170	15	67,54,41,59,162,150,83,262,127,89,75,149,142,29,219,	0,555,2235,3146,3837,4276,4919,5378,5920,6239,6422,6601,7525,7763,7914,
#Partially deleted in new
chr19	55075887	55080376	chr19:55075887-55080376	0	+	55075887	55075887	8553170	6	32,54,41,59,162,248,	0,520,2200,3111,3802,4241,
#Partially deleted in new
chr19	55075900	55087922	chr19:55075900-55087922	3	+	55076444	55087614	0	20	19,54,41,59,162,150,83,262,127,89,75,149,142,29,133,132,127,175,133,395,	0,507,2187,3098,3789,4228,4871,5330,5872,6191,6374,6553,7477,7715,9940,10160,10491,10813,11402,11627,
#Partially deleted in new
chr19	55075902	55087848	chr19:55075902-55087848	1	+	55079764	55087614	789624	18	17,54,162,150,83,262,127,89,75,149,142,29,133,132,127,175,133,321,	0,505,3787,4226,4869,5328,5870,6189,6372,6551,7475,7713,9938,10158,10489,10811,11400,11625,
#Partially deleted in new
chr19	55076355	55085892	chr19:55076355-55085892	0	+	55078125	55083782	789624	14	106,41,162,150,83,262,127,89,75,149,142,29,876,52,	0,1732,3334,3773,4416,4875,5417,5736,5919,6098,7022,7260,7411,9485,
#Deleted in new
chr19	55079584	55080183	chr19:55079584-55080183	0	+	55079584	55079584	8553170	2	267,55,	0,544,
#Partially deleted in new
chr19	55080391	55087919	chr19:55080391-55087919	1	+	55080493	55087614	0	15	150,83,262,127,89,75,149,142,29,133,132,127,175,133,392,	0,380,839,1381,1700,1883,2062,2986,3224,5449,5669,6000,6322,6911,7136,
#Partially deleted in new
chr19	55080391	55087689	chr19:55080391-55087689	1	+	55080493	55087614	789624	9	156,122,267,133,132,127,175,133,162,	0,2089,2986,5449,5669,6000,6322,6911,7136,
#Deleted in new
chr19	55080436	55081327	chr19:55080436-55081327	0	+	55080436	55080436	8553170	2	418,97,	0,794,
#Deleted in new
chr19	55081031	55081874	chr19:55081031-55081874	0	+	55081031	55081031	8553170	2	461,102,	0,741,
#Partially deleted in new
chr19	55081691	55083404	chr19:55081691-55083404	0	+	55081691	55081691	8553170	5	208,89,75,149,27,	0,400,583,762,1686,
#Partially deleted in new
chr19	55081692	55087922	chr19:55081692-55087922	0	+	55081692	55081692	8553170	10	207,258,149,267,133,132,127,175,133,395,	0,399,761,1685,4148,4368,4699,5021,5610,5835,
#Partially deleted in new
chr19	55081692	55083480	chr19:55081692-55083480	0	+	55081692	55081692	8553170	4	207,258,149,103,	0,399,761,1685,
#Partially deleted in new
chr19	55081937	55087923	chr19:55081937-55087923	0	+	55081937	55081937	8553170	10	243,75,149,267,133,132,127,175,133,396,	0,337,516,1440,3903,4123,4454,4776,5365,5590,
#Partially deleted in new
chr19	55084464	55086435	chr19:55084464-55086435	0	+	55084464	55084464	8553170	4	178,133,132,44,	0,1376,1596,1927,
#Deleted in new
chr19	55085694	55086192	chr19:55085694-55086192	0	+	55085694	55085694	8553170	2	279,132,	0,366,
#Deleted in new
chr19	55086776	55087920	chr19:55086776-55087920	0	+	55086776	55086776	8553170	3	112,81,393,	0,578,751,
#Deleted in new
chr19	55087068	55087905	chr19:55087068-55087905	0	+	55087068	55087068	8553170	2	367,378,	0,459,
#Partially deleted in new
chr19	55090912	55117559	chr19:55090912-55117559	3	-	55091471	55117543	789624	22	646,51,51,105,103,41,86,61,81,91,138,68,159,74,128,74,75,145,160,119,131,337,	0,737,946,1309,1529,1709,1870,2103,2240,3432,3748,4378,4532,4954,5138,5349,7871,8038,12496,21554,21752,26310,
#Deleted in new
chr19	55090913	55094796	chr19:55090913-55094796	0	-	55091471	55094796	789624	9	645,51,51,105,103,32,48,91,136,	0,736,945,1308,1528,1708,2272,3431,3747,
#Deleted in new
chr19	55091207	55092598	chr19:55091207-55092598	0	-	55091207	55091207	8553170	4	351,51,51,377,	0,442,651,1014,
#Partially deleted in new
chr19	55091360	55113618	chr19:55091360-55113618	1	-	55091471	55113490	789624	22	198,51,51,105,103,41,83,61,81,91,138,68,159,74,128,74,75,145,160,119,131,227,	0,289,498,861,1081,1261,1422,1655,1792,2984,3300,3930,4084,4506,4690,4901,7423,7590,12048,21106,21304,22031,
#Partially deleted in new
chr19	55091415	55117413	chr19:55091415-55117413	0	-	55091471	55117413	789624	22	143,51,51,105,103,41,83,61,81,91,138,68,156,74,128,74,75,145,160,119,131,191,	0,234,443,806,1026,1206,1367,1600,1737,2929,3245,3875,4029,4451,4635,4846,7368,7535,11993,21051,21249,25807,
#Deleted in new
chr19	55092775	55095161	chr19:55092775-55095161	0	-	55092775	55092775	8553170	5	93,61,81,91,501,	0,240,377,1569,1885,
#Deleted in new
chr19	55092789	55094694	chr19:55092789-55094694	0	-	55092789	55092789	8553170	4	76,218,91,34,	0,226,1555,1871,
#Deleted in new
chr19	55096076	55097064	chr19:55096076-55097064	0	-	55096076	55096076	8553170	2	259,213,	0,775,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	55111375	55115516	chr19:55111375-55115516	0	-	55111375	55111375	8553170	1	4141,	0,
#Partially deleted in new
chr19	55119249	55120383	chr19:55119249-55120383	7	-	55119249	55119249	16724991	3	133,298,57,	0,458,1077,
#Duplicated in new
chr19	55123224	55123292	chr19:55123224-55123292	3	-	55123224	55123224	5263520	1	68,	0,
#Partially deleted in new
chr19	55132793	55149206	chr19:55132793-55149206	1	-	55132914	55147157	789624	14	167,41,91,110,114,78,117,64,22,33,27,14,43,46,	0,1093,1272,4309,5167,8089,8392,9063,12750,13640,13887,14214,14332,16367,
#Partially deleted in new
chr19	55132793	55149206	chr19:55132793-55149206	1	-	55132914	55147157	789624	13	167,41,91,110,114,78,117,64,22,27,14,43,46,	0,1093,1272,4309,5167,8089,8392,9063,12750,13887,14214,14332,16367,
#Partially deleted in new
chr19	55132793	55149193	chr19:55132793-55149193	1	-	55132914	55147157	789624	14	167,41,91,110,114,78,117,64,22,27,14,43,95,33,	0,1093,1272,4309,5167,8089,8392,9063,12750,13887,14214,14332,15205,16367,
#Partially deleted in new
chr19	55132793	55149206	chr19:55132793-55149206	1	-	55132914	55147132	789624	10	167,41,91,110,114,30,27,14,43,46,	0,1093,1272,4309,5167,8089,13887,14214,14332,16367,
#Partially deleted in new
chr19	55132793	55149354	chr19:55132793-55149354	3	-	55132914	55147157	789624	14	167,41,139,110,114,78,117,64,22,33,27,14,43,194,	0,1093,1272,4309,5167,8089,8392,9063,12750,13640,13887,14214,14332,16367,
#Partially deleted in new
chr19	55132825	55141891	chr19:55132825-55141891	0	-	55132914	55141891	789624	8	135,41,91,110,114,78,117,35,	0,1061,1240,4277,5135,8057,8360,9031,
#Partially deleted in new
chr19	55132827	55140922	chr19:55132827-55140922	0	-	55132914	55140922	789624	6	133,41,91,110,114,40,	0,1059,1238,4275,5133,8055,
#Partially deleted in new
chr19	55132831	55149206	chr19:55132831-55149206	1	-	55132914	55141284	789624	12	129,41,91,110,114,78,117,64,22,27,62,46,	0,1055,1234,4271,5129,8051,8354,9025,12712,13849,14275,16329,
#Partially deleted in new
chr19	55132834	55146949	chr19:55132834-55146949	1	-	55132914	55141284	789624	11	126,41,91,110,114,78,117,64,22,33,269,	0,1052,1231,4268,5126,8048,8351,9022,12709,13599,13846,
#Partially deleted in new
chr19	55132864	55146942	chr19:55132864-55146942	1	-	55132914	55141284	789624	10	96,41,91,110,114,78,117,64,22,262,	0,1022,1201,4238,5096,8018,8321,8992,12679,13816,
#Partially deleted in new
chr19	55132875	55146454	chr19:55132875-55146454	0	-	55141897	55146454	789624	10	85,41,91,110,114,78,117,201,22,21,	0,1011,1190,4227,5085,8007,8310,8981,12668,13558,
#Partially deleted in new
chr19	55137102	55147346	chr19:55137102-55147346	0	-	55137102	55147157	789624	10	110,114,78,117,64,22,33,27,14,221,	0,858,3780,4083,4754,8441,9331,9578,9905,10023,
#Partially deleted in new
chr19	55137975	55147308	chr19:55137975-55147308	0	-	55137975	55147157	789624	8	99,78,117,64,22,27,14,183,	0,2907,3210,3881,7568,8705,9032,9150,
#Partially deleted in new
chr19	55138017	55149206	chr19:55138017-55149206	0	-	55138017	55147157	789624	9	57,78,117,64,22,48,14,43,46,	0,2865,3168,3839,7526,8642,8990,9108,11143,
#Partially deleted in new
chr19	55145399	55149206	chr19:55145399-55149206	0	-	55145399	55145399	8553170	6	166,33,25,14,43,46,	0,1034,1281,1608,1726,3761,
#Partially deleted in new
chr19	55151766	55156481	chr19:55151766-55156481	0	-	55151766	55151766	8553170	4	151,177,90,281,	0,2263,2974,4434,
#Partially deleted in new
chr19	55151769	55157732	chr19:55151769-55157732	3	-	55151833	55157589	0	8	148,177,90,132,42,84,13,154,	0,2260,2971,4431,4833,5280,5526,5809,
#Partially deleted in new
chr19	55151769	55154406	chr19:55151769-55154406	0	-	55151769	55151769	8553170	2	148,377,	0,2260,
#Partially deleted in new
chr19	55151770	55156725	chr19:55151770-55156725	1	-	55151833	55156677	789624	5	147,177,90,132,123,	0,2259,2970,4430,4832,
#Partially deleted in new
chr19	55154109	55157282	chr19:55154109-55157282	0	-	55154109	55154109	8553170	6	97,90,132,42,84,32,	0,631,2091,2493,2940,3141,
#Partially deleted in new
chr19	55154304	55157773	chr19:55154304-55157773	0	-	55154304	55154304	8553170	6	526,132,42,84,13,195,	0,1896,2298,2745,2991,3274,
#Partially deleted in new
chr19	55154745	55157716	chr19:55154745-55157716	0	-	55154745	55154745	8553170	6	85,132,42,84,58,138,	0,1455,1857,2304,2505,2833,
#Partially deleted in new
chr19	55154756	55160671	chr19:55154756-55160671	3	-	55157692	55160671	789624	9	74,132,42,79,169,257,75,115,32,	0,1444,1846,2293,2805,4436,4776,5142,5883,
#Partially deleted in new
chr19	55156274	55156792	chr19:55156274-55156792	0	-	55156274	55156677	789624	2	96,190,	0,328,
#Partially deleted in new
chr19	55156728	55157732	chr19:55156728-55157732	0	-	55156728	55156728	8553170	2	400,171,	0,833,
#Partially deleted in new
chr19	55158660	55166722	chr19:55158660-55166722	1	-	55159061	55165847	789624	12	789,75,115,136,123,126,183,158,94,219,89,211,	0,872,1238,1979,2404,2632,2982,3472,6709,7121,7668,7851,
#Partially deleted in new
chr19	55158662	55166651	chr19:55158662-55166651	3	-	55159061	55166648	789624	12	787,75,115,136,123,126,183,158,94,143,89,140,	0,870,1236,1977,2402,2630,2980,3470,6707,7195,7666,7849,
#Partially deleted in new
chr19	55158662	55166552	chr19:55158662-55166552	1	-	55159061	55166413	789624	12	787,75,115,136,123,126,183,158,94,143,89,30,	0,870,1236,1977,2402,2630,2980,3470,6707,7195,7666,7860,
#Partially deleted in new
chr19	55158662	55166650	chr19:55158662-55166650	1	-	55159061	55166648	789624	12	787,75,112,136,123,126,183,158,94,206,89,139,	0,870,1236,1977,2402,2630,2980,3470,6707,7195,7666,7849,
#Partially deleted in new
chr19	55158662	55166621	chr19:55158662-55166621	0	-	55165797	55166413	789624	12	787,75,115,136,123,126,183,158,94,219,89,110,	0,870,1236,1977,2402,2630,2980,3470,6707,7119,7666,7849,
#Partially deleted in new
chr19	55158662	55162067	chr19:55158662-55162067	0	-	55158662	55158662	8553170	7	787,75,115,136,123,126,425,	0,870,1236,1977,2402,2630,2980,
#Partially deleted in new
chr19	55158752	55160659	chr19:55158752-55160659	0	-	55158752	55158752	8553170	4	697,188,115,20,	0,780,1146,1887,
#Partially deleted in new
chr19	55158793	55160689	chr19:55158793-55160689	0	-	55159061	55160689	789624	4	656,75,112,50,	0,739,1105,1846,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	55158938	55177540	chr19:55158938-55177540	3	+	55158938	55158938	8553170	5	400,567,169,50,457,	0,483,2107,3813,18145,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	55161009	55162807	chr19:55161009-55162807	0	-	55161009	55161009	8553170	3	178,158,160,	0,1123,1638,
#Partially deleted in new
chr19	55161126	55162349	chr19:55161126-55162349	0	-	55161126	55161126	8553170	4	61,126,183,217,	0,166,516,1006,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	55161333	55162818	chr19:55161333-55162818	0	-	55161333	55161333	8553170	4	85,183,158,171,	0,309,799,1314,
#Partially deleted in new
chr19	55162132	55166576	chr19:55162132-55166576	0	-	55162132	55166413	789624	5	158,94,143,105,65,	0,3237,3725,4196,4379,
#Partially deleted in new
chr19	55162221	55166576	chr19:55162221-55166576	0	-	55162221	55166031	789624	5	69,94,220,89,65,	0,3148,3636,4107,4290,
#Partially deleted in new
chr19	55162241	55166640	chr19:55162241-55166640	0	-	55162241	55166031	789624	5	49,94,220,89,118,	0,3128,3616,4087,4281,
#Partially deleted in new
chr19	55162261	55166576	chr19:55162261-55166576	0	-	55165797	55166413	789624	5	29,94,219,89,54,	0,3108,3520,4067,4261,
#Deleted in new
chr19	55165816	55166722	chr19:55165816-55166722	0	-	55165816	55165816	8553170	3	247,89,211,	0,512,695,
#Deleted in new
chr19	55165988	55166640	chr19:55165988-55166640	0	-	55165988	55165988	8553170	2	429,118,	0,534,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	55171198	55179390	chr19:55171198-55179390	1	-	55173483	55179205	0	7	2486,134,115,168,168,120,428,	0,3318,3683,3973,4510,4806,7764,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	55171222	55180441	chr19:55171222-55180441	3	-	55173483	55179041	0	9	2462,134,118,168,168,120,173,124,325,	0,3294,3659,3949,4486,4782,6973,7740,8894,
#Partially deleted in new
chr19	55171686	55173093	chr19:55171686-55173093	0	-	55171686	55171686	8553170	2	95,516,	0,891,
#Partially deleted in new
chr19	55173095	55180104	chr19:55173095-55180104	1	-	55173483	55179041	0	8	589,134,118,168,168,120,173,1142,	0,1421,1786,2076,2613,2909,5100,5867,
#Deleted in new
chr19	55173594	55176257	chr19:55173594-55176257	0	-	55173594	55173594	8553170	6	90,134,118,168,168,253,	0,922,1287,1577,2114,2410,
#Deleted in new
chr19	55173597	55175344	chr19:55173597-55175344	0	-	55173597	55173597	8553170	4	87,134,118,173,	0,919,1284,1574,
#Deleted in new
chr19	55173639	55175031	chr19:55173639-55175031	0	-	55173639	55174903	789624	3	45,134,150,	0,877,1242,
#Deleted in new
chr19	55173639	55174566	chr19:55173639-55174566	0	-	55174009	55174566	789624	2	388,50,	0,877,
#Partially deleted in new
chr19	55175286	55179390	chr19:55175286-55179390	0	-	55176053	55179041	789624	4	53,168,120,428,	0,422,718,3676,
#Partially deleted in new
chr19	55175784	55180034	chr19:55175784-55180034	0	-	55175784	55179041	789624	5	92,120,173,124,71,	0,220,2411,3178,4179,
#Partially deleted in new
chr19	55175792	55180276	chr19:55175792-55180276	0	-	55175792	55179041	789624	5	84,120,173,103,160,	0,212,2403,3170,4324,
#Partially deleted in new
chr19	55181247	55209456	chr19:55181247-55209456	1	-	55181753	55209433	789624	18	656,136,161,123,135,77,91,91,48,79,267,300,270,267,267,267,34,74,	0,768,4254,4614,4977,5216,6265,6830,10253,10415,15274,15869,17395,18988,20808,25441,25918,28135,
#Partially deleted in new
chr19	55181247	55209456	chr19:55181247-55209456	3	-	55181753	55209433	789624	20	656,136,161,123,135,77,91,91,48,79,267,300,270,267,267,267,267,267,34,74,	0,768,4254,4614,4977,5216,6265,6830,10253,10415,15274,15869,17395,18988,20808,22534,24078,25441,25918,28135,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	55194013	55209506	chr19:55194013-55209506	0	-	55194013	55194013	8553170	11	285,267,300,270,267,267,267,267,288,34,124,	0,2508,3103,4629,6222,8042,9768,11312,12675,13152,15369,
#Partially deleted in new
chr19	55203991	55207254	chr19:55203991-55207254	0	-	55203991	55203991	8553170	4	57,267,267,89,	0,1334,2697,3174,
#Partially deleted in new
chr19	55205391	55207239	chr19:55205391-55207239	0	-	55205391	55205391	8553170	3	201,267,114,	0,1297,1734,
#Partially deleted in new
chr19	55205403	55207270	chr19:55205403-55207270	0	-	55205403	55205403	8553170	3	189,288,105,	0,1285,1762,
#Partially deleted in new
chr19	55205501	55209500	chr19:55205501-55209500	0	-	55205501	55205501	8553170	4	91,288,74,118,	0,1187,1624,3881,
#Partially deleted in new
chr19	55216659	55221616	chr19:55216659-55221616	3	+	55216659	55216659	8553170	2	50,807,	0,4150,
#Deleted in new
chr19	55216681	55217429	chr19:55216681-55217429	1	+	55216681	55216681	8553170	1	748,	0,
#Deleted in new
chr19	55226638	55228773	chr19:55226638-55228773	0	-	55226638	55226638	8553170	2	925,583,	0,1552,
#Deleted in new
chr19	55226747	55229264	chr19:55226747-55229264	3	-	55227180	55228741	789624	3	816,247,574,	0,1443,1943,
#Deleted in new
chr19	55226750	55228784	chr19:55226750-55228784	0	-	55226750	55226750	8553170	1	2034,	0,
#Deleted in new
chr19	55227218	55230279	chr19:55227218-55230279	3	-	55227218	55227218	8553170	1	3061,	0,
#Partially deleted in new
chr19	55229779	55258995	chr19:55229779-55258995	3	-	55230527	55247103	789624	24	752,72,111,82,71,181,137,179,58,98,90,86,116,65,135,153,163,114,113,66,138,187,233,561,	0,833,994,1630,1818,2022,2295,6863,7133,9625,9814,10046,10219,10456,11165,11459,11697,12386,12596,15340,15485,15712,17097,28655,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	55229779	55233194	chr19:55229779-55233194	0	-	55229779	55229779	8553170	7	752,72,111,82,71,181,1120,	0,833,994,1630,1818,2022,2295,
#Partially deleted in new
chr19	55230489	55247372	chr19:55230489-55247372	1	-	55230527	55247103	789624	23	42,72,111,82,71,181,137,179,58,98,90,86,116,65,135,153,163,114,113,66,138,187,496,	0,123,284,920,1108,1312,1585,6153,6423,8915,9104,9336,9509,9746,10455,10749,10987,11676,11886,14630,14775,15002,16387,
#Deleted in new
chr19	55230884	55230952	chr19:55230884-55230952	3	-	55230884	55230884	5263520	1	68,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	55236312	55239505	chr19:55236312-55239505	0	-	55236312	55236312	8553170	3	509,58,101,	0,600,3092,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	55238693	55239688	chr19:55238693-55239688	0	-	55238693	55238693	8553170	2	809,95,	0,900,
#Deleted in new
chr19	55239911	55239976	chr19:55239911-55239976	3	-	55239911	55239911	5263520	1	65,	0,
#Deleted in new
chr19	55239985	55242368	chr19:55239985-55242368	0	-	55239985	55239985	8553170	6	129,65,135,153,163,203,	0,250,959,1253,1491,2180,
#Deleted in new
chr19	55241476	55242618	chr19:55241476-55242618	0	-	55241476	55241476	8553170	3	163,114,243,	0,689,899,
#Deleted in new
chr19	55245185	55245250	chr19:55245185-55245250	3	-	55245185	55245185	5263520	1	65,	0,
#Partially deleted in new
chr19	55245343	55255769	chr19:55245343-55255769	0	-	55245343	55247103	789624	4	59,187,233,95,	0,148,1533,10331,
#Partially deleted in new
chr19	55262230	55280360	chr19:55262230-55280360	3	-	55262607	55279608	789624	9	452,112,97,156,225,205,304,74,143,	0,3047,3655,3900,12167,15411,17168,17804,17987,
#Partially deleted in new
chr19	55262352	55280177	chr19:55262352-55280177	1	-	55262607	55279608	789624	8	330,112,97,156,225,205,304,143,	0,2925,3533,3778,12045,15289,17046,17682,
#Partially deleted in new
chr19	55262486	55279856	chr19:55262486-55279856	1	-	55262607	55279608	789624	7	196,112,97,156,225,205,458,	0,2791,3399,3644,11911,15155,16912,
#Partially deleted in new
chr19	55262639	55279704	chr19:55262639-55279704	0	-	55262639	55279608	789624	5	43,27,151,139,306,	0,2638,11832,15002,16759,
#Partially deleted in new
chr19	55266235	55279690	chr19:55266235-55279690	0	-	55266235	55277657	789624	4	51,225,64,84,	0,8162,11406,13371,
#Partially deleted in new
chr19	55274395	55280077	chr19:55274395-55280077	0	-	55274395	55279608	789624	4	227,205,304,148,	0,3246,5003,5534,
#Partially deleted in new
chr19	55277643	55279856	chr19:55277643-55279856	0	-	55277643	55279608	789624	3	203,304,50,	0,1755,2163,
#Partially deleted in new
chr19	55277646	55280332	chr19:55277646-55280332	0	-	55277646	55279608	789624	4	200,307,74,115,	0,1752,2388,2571,
#Deleted in new
chr19	55279513	55280381	chr19:55279513-55280381	0	-	55279513	55279608	789624	2	189,347,	0,521,
#Partially deleted in new
chr19	55284165	55312533	chr19:55284165-55312533	3	+	55284442	55312068	789624	19	413,95,86,141,117,34,69,147,32,171,98,160,61,370,49,124,199,90,623,	0,2841,3048,5314,9851,10048,10163,17346,17971,18531,19145,19501,19884,20385,21155,21297,22086,24473,27745,
#Partially deleted in new
chr19	55284420	55302921	chr19:55284420-55302921	1	+	55284442	55302871	789624	10	158,95,86,141,117,34,69,147,32,225,	0,2586,2793,5059,9596,9793,9908,17091,17716,18276,
#Deleted in new
chr19	55302065	55304073	chr19:55302065-55304073	0	+	55302754	55304073	789624	5	103,171,98,160,24,	0,631,1245,1601,1984,
#Partially deleted in new
chr19	55302233	55312533	chr19:55302233-55312533	1	+	55302754	55312068	789624	11	150,171,98,160,61,370,49,124,199,90,623,	0,463,1077,1433,1816,2317,3087,3229,4018,6405,9677,
#Deleted in new
chr19	55303145	55304667	chr19:55303145-55304667	0	+	55303145	55303145	8553170	3	263,160,117,	0,521,1405,
#Deleted in new
chr19	55304047	55305527	chr19:55304047-55305527	0	+	55304047	55304047	8553170	4	63,370,49,65,	0,503,1273,1415,
#Deleted in new
chr19	55312028	55312495	chr19:55312028-55312495	3	-	55312028	55312028	8553170	2	285,74,	0,393,
#Partially deleted in new
chr19	55312800	55325301	chr19:55312800-55325301	3	-	55312858	55321036	789624	8	255,181,128,68,60,125,96,30,	0,3985,7238,7590,7757,8168,9847,12471,
#Partially deleted in new
chr19	55312800	55325305	chr19:55312800-55325305	0	-	55320102	55321036	789624	7	255,181,128,60,76,96,34,	0,3985,7238,7757,8168,9847,12471,
#Partially deleted in new
chr19	55312801	55325305	chr19:55312801-55325305	0	-	55320102	55321036	789624	7	254,181,128,60,125,96,34,	0,3984,7237,7756,8167,9846,12470,
#Partially deleted in new
chr19	55312968	55320451	chr19:55312968-55320451	0	-	55312968	55320451	789624	4	87,181,128,61,	0,3817,7070,7422,
#Partially deleted in new
chr19	55312972	55325311	chr19:55312972-55325311	0	-	55316907	55321036	789624	6	83,192,68,60,76,40,	0,3802,7418,7585,7996,12299,
#Partially deleted in new
chr19	55316887	55325340	chr19:55316887-55325340	0	-	55316887	55321036	789624	7	79,128,68,60,76,96,69,	0,3151,3503,3670,4081,5760,8384,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	55319463	55334048	chr19:55319463-55334048	0	-	55319463	55319463	8553170	6	703,68,60,125,96,145,	0,927,1094,1505,3184,14440,
#Deleted in new
chr19	55338944	55339283	chr19:55338944-55339283	3	-	55338944	55338944	8553170	1	339,	0,
#Partially deleted in new
chr19	55339852	55348120	chr19:55339852-55348120	3	+	55341936	55347449	0	9	105,253,166,110,164,20,137,188,1165,	0,1941,2362,2889,3827,4125,6360,6647,7103,
#Partially deleted in new
chr19	55339852	55343818	chr19:55339852-55343818	0	+	55339852	55339852	8553170	4	105,253,166,1077,	0,1941,2362,2889,
#Partially deleted in new
chr19	55339875	55342785	chr19:55339875-55342785	0	+	55339875	55339875	8553170	3	82,587,44,	0,1918,2866,
#Partially deleted in new
chr19	55339885	55345193	chr19:55339885-55345193	0	+	55339885	55339885	8553170	3	72,253,563,	0,1908,4745,
#Partially deleted in new
chr19	55339917	55348120	chr19:55339917-55348120	0	+	55341936	55343753	0	8	40,253,110,164,20,137,188,1165,	0,1876,2824,3762,4060,6295,6582,7038,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	55341615	55344379	chr19:55341615-55344379	0	+	55341615	55341615	8553170	3	431,166,1638,	0,599,1126,
#Partially deleted in new
chr19	55341793	55348120	chr19:55341793-55348120	1	+	55342810	55347449	789624	7	253,110,164,20,137,188,1165,	0,948,1886,2184,4419,4706,5162,
#Partially deleted in new
chr19	55341840	55346731	chr19:55341840-55346731	0	+	55341936	55343753	0	6	206,110,164,20,137,232,	0,901,1839,2137,4372,4659,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	55342321	55344171	chr19:55342321-55344171	0	+	55342321	55342321	8553170	3	59,110,492,	0,420,1358,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	55342617	55346675	chr19:55342617-55346675	0	+	55342617	55342617	8553170	6	30,110,164,20,137,176,	0,124,1062,1360,3595,3882,
#Partially deleted in new
chr19	55342774	55346609	chr19:55342774-55346609	0	+	55342774	55342774	8553170	5	77,120,20,137,110,	0,949,1203,3438,3725,
#Deleted in new
chr19	55346072	55347216	chr19:55346072-55347216	0	+	55346072	55346072	8553170	3	277,188,261,	0,427,883,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	55349305	55354696	chr19:55349305-55354696	3	-	55353720	55354521	789624	5	1498,168,101,130,47,	0,4301,4560,5104,5344,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	55349701	55354814	chr19:55349701-55354814	1	-	55353720	55354521	789624	5	1099,168,101,130,165,	0,3905,4164,4708,4948,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	55349707	55354711	chr19:55349707-55354711	1	-	55353720	55354521	789624	8	1093,246,204,79,168,101,130,62,	0,2373,2825,3604,3899,4158,4702,4942,
#Deleted in new
chr19	55350412	55354540	chr19:55350412-55354540	1	-	55353720	55354521	789624	8	388,192,246,88,82,168,101,131,	0,1286,1668,2002,2899,3194,3453,3997,
#Deleted in new
chr19	55351756	55353394	chr19:55351756-55353394	0	-	55351756	55351756	8553170	2	279,411,	0,1227,
#Deleted in new
chr19	55352006	55352168	chr19:55352006-55352168	0	-	55352006	55352006	8553170	1	162,	0,
#Deleted in new
chr19	55352178	55353689	chr19:55352178-55353689	0	-	55352178	55352178	8553170	3	148,88,83,	0,236,1428,
#Partially deleted in new
chr19	55352300	55359516	chr19:55352300-55359516	3	-	55355299	55359516	789624	8	26,204,82,168,674,446,86,1372,	0,232,1011,1306,1565,2349,2959,5844,
#Deleted in new
chr19	55353596	55354719	chr19:55353596-55354719	1	-	55353720	55354521	789624	4	178,101,130,70,	0,269,813,1053,
#Deleted in new
chr19	55354107	55354711	chr19:55354107-55354711	0	-	55354107	55354107	8553170	2	432,62,	0,542,
#Deleted in new
chr19	55354139	55354687	chr19:55354139-55354687	0	-	55354139	55354139	8553170	1	548,	0,
#Partially deleted in new
chr19	55354907	55363260	chr19:55354907-55363260	3	-	55355299	55363066	789624	11	188,86,1835,77,53,104,65,25,259,155,344,	0,352,3237,5785,5945,6092,6266,6502,7337,7670,8009,
#Partially deleted in new
chr19	55354907	55363252	chr19:55354907-55363252	0	-	55362637	55363066	789624	9	188,86,1835,213,104,65,259,155,283,	0,352,3237,5785,6092,6266,7337,7670,8062,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	55364388	55370373	chr19:55364388-55370373	3	-	55366006	55370310	0	5	1789,162,87,173,70,	0,3821,4094,4380,5915,
#Partially deleted in new
chr19	55365558	55370463	chr19:55365558-55370463	1	-	55366006	55370310	0	5	619,162,87,173,160,	0,2651,2924,3210,4745,
#Partially deleted in new
chr19	55365558	55370463	chr19:55365558-55370463	1	-	55366006	55368512	0	4	619,162,87,160,	0,2651,2924,4745,
#Deleted in new
chr19	55368281	55369241	chr19:55368281-55369241	0	-	55368281	55368512	789624	3	90,87,473,	0,201,487,
#Deleted in new
chr19	55376835	55378244	chr19:55376835-55378244	3	+	55376853	55378203	789624	5	76,36,126,85,270,	0,155,757,966,1139,
#Deleted in new
chr19	55377578	55378125	chr19:55377578-55378125	3	-	55377578	55377578	8553170	1	547,	0,
#Partially deleted in new
chr19	55379244	55384598	chr19:55379244-55384598	3	-	55383728	55384259	789624	2	123,877,	0,4477,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	55385344	55392085	chr19:55385344-55392085	3	+	55386357	55388332	0	5	621,89,124,119,3843,	0,1005,1225,2585,2898,
#Deleted in new
chr19	55385931	55387610	chr19:55385931-55387610	1	+	55386357	55387289	0	4	34,89,124,326,	0,418,638,1353,
#Deleted in new
chr19	55385931	55387036	chr19:55385931-55387036	1	+	55386357	55386752	0	3	34,89,467,	0,418,638,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	55385931	55391803	chr19:55385931-55391803	1	+	55386357	55391739	0	5	34,89,124,119,250,	0,418,638,1998,5622,
#Deleted in new
chr19	55385933	55388888	chr19:55385933-55388888	1	+	55386357	55388216	0	4	32,89,124,959,	0,416,636,1996,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	55385935	55403250	chr19:55385935-55403250	1	+	55386357	55403131	789624	5	30,89,124,119,308,	0,414,634,1994,17007,
#Deleted in new
chr19	55385942	55388343	chr19:55385942-55388343	0	+	55385942	55385942	8553170	4	23,89,1479,101,	0,407,627,2300,
#Deleted in new
chr19	55385960	55388373	chr19:55385960-55388373	1	+	55386357	55388332	0	4	478,124,119,131,	0,609,1969,2282,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	55386349	55392100	chr19:55386349-55392100	0	+	55386349	55386349	8553170	2	89,5531,	0,220,
#Deleted in new
chr19	55386349	55388373	chr19:55386349-55388373	1	+	55386357	55388013	789624	4	89,105,119,131,	0,220,1580,1893,
#Deleted in new
chr19	55386356	55387231	chr19:55386356-55387231	1	+	55386357	55386900	789624	3	82,124,465,	0,213,410,
#Deleted in new
chr19	55388180	55388242	chr19:55388180-55388242	3	+	55388180	55388180	5263520	1	62,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	55399744	55407777	chr19:55399744-55407777	3	-	55401435	55407589	0	4	2018,191,148,191,	0,4543,7070,7842,
#Partially deleted in new
chr19	55401578	55407719	chr19:55401578-55407719	0	-	55401578	55407589	789624	5	184,87,191,148,133,	0,2482,2709,5236,6008,
#Partially deleted in new
chr19	55401713	55407771	chr19:55401713-55407771	1	-	55404312	55407589	789624	4	49,114,148,185,	0,2574,5101,5873,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	55403907	55404144	chr19:55403907-55404144	0	-	55403907	55403907	8553170	1	237,	0,
#Partially deleted in new
chr19	55428739	55442863	chr19:55428739-55442863	3	-	55433155	55442863	789624	4	5057,150,155,671,	0,8865,11871,13453,
#Partially deleted in new
chr19	55431975	55442337	chr19:55431975-55442337	0	-	55437643	55442337	789624	5	1821,150,50,155,145,	0,5629,6585,8635,10217,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	55452984	55462343	chr19:55452984-55462343	1	-	55453307	55456486	789624	5	404,118,71,141,832,	0,2004,2275,3364,8527,
#Partially deleted in new
chr19	55452988	55461645	chr19:55452988-55461645	1	-	55453307	55456486	789624	6	400,118,119,210,141,134,	0,2000,2271,2647,3360,8523,
#Partially deleted in new
chr19	55452988	55461569	chr19:55452988-55461569	3	-	55453307	55456486	789624	6	400,118,71,210,141,58,	0,2000,2271,2647,3360,8523,
#Deleted in new
chr19	55452988	55455585	chr19:55452988-55455585	0	-	55452988	55452988	8553170	2	596,1687,	0,910,
#Partially deleted in new
chr19	55454989	55460031	chr19:55454989-55460031	0	-	55454989	55456486	789624	5	117,71,210,141,315,	0,270,646,1359,4727,
#Partially deleted in new
chr19	55455001	55461626	chr19:55455001-55461626	0	-	55455001	55456486	789624	6	105,71,210,141,121,115,	0,258,634,1347,2090,6510,
#Partially deleted in new
chr19	55455331	55461642	chr19:55455331-55461642	0	-	55455331	55455331	8553170	3	514,141,131,	0,1017,6180,
#Partially deleted in new
chr19	55455896	55461624	chr19:55455896-55461624	0	-	55455896	55455896	8553170	2	593,113,	0,5615,
#Partially deleted in new
chr19	55463001	55464707	chr19:55463001-55464707	3	-	55463471	55464554	789624	2	966,326,	0,1380,
#Deleted in new
chr19	55467437	55467934	chr19:55467437-55467934	3	-	55467437	55467437	8553170	1	497,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	55475982	55476482	chr19:55475982-55476482	3	-	55475982	55475982	8553170	1	500,	0,
#Partially deleted in new
chr19	55476331	55484487	chr19:55476331-55484487	3	+	55479910	55484373	789624	3	476,84,3287,	0,3502,4869,
#Partially deleted in new
chr19	55476645	55481510	chr19:55476645-55481510	0	+	55481205	55481510	789624	2	162,310,	0,4555,
#Partially deleted in new
chr19	55481196	55484373	chr19:55481196-55484373	1	+	55481196	55484373	789624	1	3177,	0,
#Partially deleted in new
chr19	55485003	55487568	chr19:55485003-55487568	3	+	55485708	55486956	789624	3	255,120,1161,	0,657,1404,
#Partially deleted in new
chr19	55485194	55486607	chr19:55485194-55486607	1	+	55485708	55485867	789624	2	64,947,	0,466,
#Partially deleted in new
chr19	55485222	55487568	chr19:55485222-55487568	0	+	55485222	55485222	8553170	3	36,69,440,	0,438,1906,
#Partially deleted in new
chr19	55485233	55487566	chr19:55485233-55487566	1	+	55485708	55487358	789624	3	25,58,333,	0,427,2000,
#Partially deleted in new
chr19	55486421	55487568	chr19:55486421-55487568	0	+	55486421	55487358	789624	2	439,291,	0,856,
#Partially deleted in new
chr19	55488403	55489572	chr19:55488403-55489572	0	+	55488589	55489572	789624	3	211,27,219,	0,602,950,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	55488496	55492856	chr19:55488496-55492856	0	+	55488496	55488496	8553170	5	118,657,114,111,2085,	0,509,1385,1801,2275,
#Partially deleted in new
chr19	55488566	55519098	chr19:55488566-55519098	3	+	55488589	55518998	789624	14	48,27,309,114,111,309,318,174,318,597,315,168,162,1875,	0,439,787,1315,1731,2205,5028,6043,9313,11249,11923,12467,24444,28657,
#Partially deleted in new
chr19	55488566	55504324	chr19:55488566-55504324	1	+	55488589	55504186	789624	13	48,27,309,114,111,309,318,174,318,597,315,168,209,	0,439,787,1315,1731,2205,5028,6043,9313,11249,11923,12467,15549,
#Partially deleted in new
chr19	55493890	55499973	chr19:55493890-55499973	0	+	55493890	55499973	789624	3	22,174,158,	0,719,5925,
#Partially deleted in new
chr19	55529732	55536303	chr19:55529732-55536303	1	-	55529732	55536294	789624	3	591,203,262,	0,1410,6309,
#Partially deleted in new
chr19	55529732	55537089	chr19:55529732-55537089	3	-	55529732	55536294	789624	4	591,203,255,36,	0,1410,6309,7321,
#Partially deleted in new
chr19	55540655	55545543	chr19:55540655-55545543	3	-	55540845	55545543	789624	4	871,203,151,45,	0,3444,4143,4843,
#Deleted in new
chr19	55544247	55545522	chr19:55544247-55545522	0	-	55544247	55545522	789624	3	55,151,274,	0,551,1001,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	55576769	55580821	chr19:55576769-55580821	3	-	55577950	55579639	789624	2	2872,27,	0,4025,
#Deleted in new
chr19	55579593	55580845	chr19:55579593-55580845	0	-	55579593	55579639	789624	2	446,51,	0,1201,
#Partially deleted in new
chr19	55591370	55599527	chr19:55591370-55599527	3	-	55592449	55597865	789624	3	2276,330,54,	0,6201,8103,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	55593359	55601970	chr19:55593359-55601970	0	-	55593359	55597865	789624	2	287,4399,	0,4212,
#Partially deleted in new
chr19	55593409	55599630	chr19:55593409-55599630	1	-	55593498	55597865	789624	3	150,182,157,	0,4310,6064,
#Partially deleted in new
chr19	55593432	55597842	chr19:55593432-55597842	0	-	55593629	55597842	789624	3	214,115,271,	0,2187,4139,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	55597733	55598788	chr19:55597733-55598788	0	-	55597733	55597865	789624	2	168,294,	0,761,
#Partially deleted in new
chr19	55600021	55602503	chr19:55600021-55602503	0	+	55602112	55602503	789624	2	60,429,	0,2053,
#Partially deleted in new
chr19	55600368	55603136	chr19:55600368-55603136	3	+	55602112	55602907	789624	2	40,1062,	0,1706,
#Deleted in new
chr19	55601878	55603138	chr19:55601878-55603138	1	+	55602112	55602907	789624	1	1260,	0,
#Partially deleted in new
chr19	55605404	55617269	chr19:55605404-55617269	3	+	55613618	55616798	789624	2	328,3677,	0,8188,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	55612489	55613097	chr19:55612489-55613097	3	-	55612489	55612489	8553170	1	608,	0,
#Deleted in new
chr19	55615971	55616468	chr19:55615971-55616468	1	+	55615971	55616468	789624	2	45,54,	0,443,
#Partially deleted in new
chr19	55620741	55624601	chr19:55620741-55624601	3	-	55621750	55624561	789624	2	1903,118,	0,3742,
#Partially deleted in new
chr19	55621205	55624566	chr19:55621205-55624566	1	-	55622630	55624561	789624	2	1439,120,	0,3241,
#Partially deleted in new
chr19	55635015	55642818	chr19:55635015-55642818	0	+	55642508	55642818	789624	2	697,322,	0,7481,
#Partially deleted in new
chr19	55635458	55645622	chr19:55635458-55645622	3	+	55644571	55645165	789624	2	254,1070,	0,9094,
#Deleted in new
chr19	55640895	55643469	chr19:55640895-55643469	3	+	55642508	55643027	789624	2	288,973,	0,1601,
#Deleted in new
chr19	55640984	55642574	chr19:55640984-55642574	0	+	55642508	55642574	789624	2	199,136,	0,1454,
#Deleted in new
chr19	55641030	55644990	chr19:55641030-55644990	0	+	55644571	55644990	789624	2	153,438,	0,3522,
#Partially deleted in new
chr19	55641061	55651487	chr19:55641061-55651487	0	+	55649046	55651487	789624	5	122,132,105,177,205,	0,7884,8143,8346,10221,
#Deleted in new
chr19	55641762	55643469	chr19:55641762-55643469	1	+	55642508	55643027	789624	1	1707,	0,
#Deleted in new
chr19	55642096	55643469	chr19:55642096-55643469	1	+	55642508	55643027	789624	2	52,973,	0,400,
#Deleted in new
chr19	55642096	55642821	chr19:55642096-55642821	0	+	55642508	55642821	789624	2	52,325,	0,400,
#Deleted in new
chr19	55643546	55645622	chr19:55643546-55645622	1	+	55644571	55645165	789624	2	228,1070,	0,1006,
#Deleted in new
chr19	55643809	55645621	chr19:55643809-55645621	1	+	55644571	55645165	789624	2	31,1069,	0,743,
#Deleted in new
chr19	55648013	55649309	chr19:55648013-55649309	0	+	55649046	55649309	789624	3	264,183,105,	0,881,1191,
#Partially deleted in new
chr19	55648034	55653161	chr19:55648034-55653161	3	+	55649046	55652746	789624	6	243,76,105,177,213,732,	0,967,1170,1373,3248,4395,
#Deleted in new
chr19	55648057	55649290	chr19:55648057-55649290	0	+	55649046	55649290	789624	3	220,320,86,	0,700,1147,
#Partially deleted in new
chr19	55648142	55653161	chr19:55648142-55653161	1	+	55649046	55652746	789624	5	935,105,177,213,732,	0,1062,1265,3140,4287,
#Partially deleted in new
chr19	55648232	55653161	chr19:55648232-55653161	1	+	55649046	55652746	789624	6	45,132,105,177,213,732,	0,713,972,1175,3050,4197,
#Partially deleted in new
chr19	55648232	55653161	chr19:55648232-55653161	1	+	55649046	55652746	789624	6	45,320,105,177,213,732,	0,525,972,1175,3050,4197,
#Deleted in new
chr19	55648904	55649655	chr19:55648904-55649655	0	+	55648904	55648904	8553170	1	751,	0,
#Partially deleted in new
chr19	55648918	55653033	chr19:55648918-55653033	1	+	55649046	55652746	789624	4	159,177,213,604,	0,489,2364,3511,
#Partially deleted in new
chr19	55654145	55674715	chr19:55654145-55674715	1	+	55655104	55674068	0	12	1008,136,45,104,152,117,139,80,123,87,249,782,	0,5064,6031,6370,6892,8356,9460,14361,14524,14937,15298,19788,
#Partially deleted in new
chr19	55655064	55674298	chr19:55655064-55674298	3	+	55655104	55674068	0	12	89,136,45,104,152,117,139,80,123,99,249,365,	0,4145,5112,5451,5973,7437,8541,13442,13605,14018,14379,18869,
#Partially deleted in new
chr19	55655081	55661317	chr19:55655081-55661317	0	+	55655081	55655081	8553170	5	72,136,45,104,280,	0,4128,5095,5434,5956,
#Partially deleted in new
chr19	55655108	55661946	chr19:55655108-55661946	0	+	55655108	55658971	789624	7	45,120,136,45,104,152,176,	0,3753,4101,5068,5407,5929,6662,
#Deleted in new
chr19	55659207	55660485	chr19:55659207-55660485	0	+	55659207	55659207	8553170	2	138,309,	0,969,
#Partially deleted in new
chr19	55660515	55668865	chr19:55660515-55668865	0	+	55660515	55661773	789624	7	104,152,64,114,139,80,196,	0,522,1255,1989,3090,7991,8154,
#Partially deleted in new
chr19	55661900	55674715	chr19:55661900-55674715	3	-	55661900	55661900	8553170	2	482,67,	0,12748,
#Partially deleted in new
chr19	55661911	55674710	chr19:55661911-55674710	0	-	55661911	55661911	8553170	2	483,62,	0,12737,
#Partially deleted in new
chr19	55662498	55674239	chr19:55662498-55674239	1	+	55662507	55674068	789624	7	120,139,80,123,87,249,306,	0,1107,6008,6171,6584,6945,11435,
#Deleted in new
chr19	55662518	55664059	chr19:55662518-55664059	0	+	55662518	55662518	8553170	2	100,454,	0,1087,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	55670631	55672069	chr19:55670631-55672069	3	+	55670631	55670631	8553170	2	109,693,	0,745,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	55675225	55709533	chr19:55675225-55709533	3	+	55678627	55695356	0	11	210,329,250,125,75,84,304,111,87,258,14386,	0,3301,10170,13644,14071,14641,16528,17460,17725,19500,19922,
#Partially deleted in new
chr19	55675244	55695766	chr19:55675244-55695766	1	+	55678627	55695356	0	10	191,329,250,125,84,304,111,84,258,619,	0,3282,10151,13625,14622,16509,17441,17709,19481,19903,
#Partially deleted in new
chr19	55676624	55695441	chr19:55676624-55695441	1	+	55677171	55695356	0	11	594,185,329,250,125,84,304,111,87,258,294,	0,925,1902,8771,12245,13242,15129,16061,16326,18101,18523,
#Partially deleted in new
chr19	55680675	55689915	chr19:55680675-55689915	0	+	55680675	55680675	8553170	5	94,250,125,75,49,	0,4720,8194,8621,9191,
#Deleted in new
chr19	55692647	55693387	chr19:55692647-55693387	0	+	55692647	55692647	8553170	2	149,434,	0,306,
#Partially deleted in new
chr19	55692769	55709858	chr19:55692769-55709858	0	+	55692769	55709790	789624	3	27,87,136,	0,181,16953,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	55694117	55694558	chr19:55694117-55694558	3	-	55694117	55694117	8553170	1	441,	0,
#Deleted in new
chr19	55695884	55697830	chr19:55695884-55697830	0	+	55695884	55695884	8553170	2	414,123,	0,1823,
#Deleted in new
chr19	55705977	55706172	chr19:55705977-55706172	7	-	55705977	55705977	16724991	1	195,	0,
#Deleted in new
chr19	55707549	55707855	chr19:55707549-55707855	7	+	55707549	55707549	16724991	1	306,	0,
#Partially deleted in new
chr19	55708431	55738402	chr19:55708431-55738402	3	-	55708911	55738374	789624	9	613,171,171,171,171,165,162,1552,308,	0,3368,3988,6623,8296,15548,21399,23567,29663,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr19	55711432	55738374	chr19:55711432-55738374	0	-	55711432	55738374	789624	9	115,171,171,171,171,165,162,1552,280,	0,367,987,3622,5295,12547,18398,20566,26662,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	55737284	55737600	chr19:55737284-55737600	3	+	55737284	55737284	8553170	1	316,	0,
#Partially deleted in new
chr19	55759013	55763175	chr19:55759013-55763175	3	+	55761800	55763175	0	3	162,295,578,	0,2778,3584,
#Partially deleted in new
chr19	55769140	55773179	chr19:55769140-55773179	3	+	55771804	55773179	789624	3	35,295,578,	0,2655,3461,
#Deleted in new
chr19	55777552	55778900	chr19:55777552-55778900	7	+	55777552	55777552	16724991	2	297,553,	0,795,
#Partially deleted in new
chr19	55785396	55818237	chr19:55785396-55818237	1	-	55785624	55818174	789624	8	475,171,171,171,171,168,1570,334,	0,3410,3832,6904,10683,16175,23372,32507,
#Partially deleted in new
chr19	55785403	55831994	chr19:55785403-55831994	3	-	55785624	55818174	789624	10	468,171,171,171,171,168,162,1570,333,32,	0,3403,3825,6897,10676,16168,22449,23365,32500,46559,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr19	55785403	55836762	chr19:55785403-55836762	0	-	55796235	55810312	789624	12	468,171,171,171,171,76,168,162,1570,132,90,427,	0,3403,3825,6897,10676,12825,16168,22449,23365,46559,47422,50932,
#Partially deleted in new
chr19	55785403	55831987	chr19:55785403-55831987	1	-	55785624	55810312	789624	9	468,171,171,171,171,168,162,1570,25,	0,3403,3825,6897,10676,16168,22449,23365,46559,
#Partially deleted in new
chr19	55810235	55836800	chr19:55810235-55836800	0	-	55810235	55810312	789624	4	103,132,90,91,	0,21727,22590,26474,
#Partially deleted in new
chr19	55836577	55881850	chr19:55836577-55881850	3	+	55852080	55881587	0	10	357,345,1576,162,168,168,171,171,171,381,	0,15438,21096,24808,25414,31131,34249,40418,42216,44892,
#Partially deleted in new
chr19	55836894	55857860	chr19:55836894-55857860	0	+	55852080	55857860	789624	3	40,345,187,	0,15121,20779,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	55857444	55881854	chr19:55857444-55881854	1	+	55857618	55881587	0	8	1805,162,168,168,171,171,171,385,	0,3941,4547,10264,13382,19551,21349,24025,
#Partially deleted in new
chr19	55858696	55881854	chr19:55858696-55881854	0	+	55858696	55881587	789624	7	553,162,168,171,171,171,385,	0,2689,3295,12130,18299,20097,22773,
#Partially deleted in new
chr19	55891698	55932336	chr19:55891698-55932336	1	-	55892095	55932311	789624	12	423,128,168,171,171,165,171,1588,66,69,69,344,	0,4293,7071,10336,13243,16093,18864,20007,32215,32891,33268,40294,
#Partially deleted in new
chr19	55895944	55932311	chr19:55895944-55932311	3	-	55895944	55932311	789624	11	175,168,171,171,165,171,1588,66,69,69,319,	0,2825,6090,8997,11847,14618,15761,27969,28645,29022,36048,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr19	55947831	55988629	chr19:55947831-55988629	3	+	55947902	55987913	789624	10	438,75,1600,171,168,153,171,171,171,816,	0,4706,6669,14235,18381,22712,25820,28301,31562,39982,
#Partially deleted in new
chr19	55947902	55987913	chr19:55947902-55987913	1	+	55947902	55987913	789624	10	367,75,1600,171,168,153,114,171,171,100,	0,4635,6598,14164,18310,22641,25806,28230,31491,39911,
#Partially deleted in new
chr19	55999725	56061813	chr19:55999725-56061813	3	+	55999725	56061528	789624	15	62,380,66,57,57,57,1597,171,168,171,171,171,171,171,418,	0,3990,9062,16016,19616,20649,27187,32885,33816,38299,41196,50692,53912,58514,61670,
#Partially deleted in new
chr19	55999725	56061810	chr19:55999725-56061810	1	+	55999725	56061528	789624	14	62,380,66,114,57,1597,171,168,171,171,171,171,171,415,	0,3990,9062,19559,20649,27187,32885,33816,38299,41196,50692,53912,58514,61670,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	56003734	56020423	chr19:56003734-56020423	0	+	56003734	56018664	789624	5	361,66,57,135,49,	0,5053,12007,14877,16640,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	56066683	56078801	chr19:56066683-56078801	3	+	56066683	56066683	789624	4	292,515,164,690,	0,9877,10495,11428,
#Partially deleted in new
chr19	56087365	56121280	chr19:56087365-56121280	3	-	56088022	56103217	789624	3	1727,89,109,	0,15773,33806,
#Partially deleted in new
chr19	56089052	56103484	chr19:56089052-56103484	0	-	56089052	56103217	789624	2	40,346,	0,14086,
#Partially deleted in new
chr19	56101649	56121250	chr19:56101649-56121250	1	-	56102836	56103217	789624	2	1578,79,	0,19522,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	56105415	56105510	chr19:56105415-56105510	3	+	56105415	56105415	8553170	1	95,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	56127235	56127466	chr19:56127235-56127466	3	-	56127235	56127235	8553170	1	231,	0,
#Partially deleted in new
chr19	56132598	56147181	chr19:56132598-56147181	0	+	56146911	56147181	789624	3	180,174,292,	0,13648,14291,
#Partially deleted in new
chr19	56140950	56147128	chr19:56140950-56147128	0	+	56146911	56147128	789624	3	229,174,239,	0,5296,5939,
#Partially deleted in new
chr19	56141186	56160892	chr19:56141186-56160892	3	+	56146911	56160201	789624	5	171,174,319,109,1269,	0,5060,5703,17307,18437,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	56141282	56155800	chr19:56141282-56155800	0	+	56141282	56141282	8553170	4	38,174,319,40,	0,4964,5607,14478,
#Partially deleted in new
chr19	56141302	56147123	chr19:56141302-56147123	0	+	56146911	56147123	789624	4	55,111,174,234,	0,973,4944,5587,
#Partially deleted in new
chr19	56141312	56160037	chr19:56141312-56160037	0	+	56141312	56141312	8553170	3	45,109,414,	0,17181,18311,
#Partially deleted in new
chr19	56141320	56160893	chr19:56141320-56160893	1	+	56146911	56160201	789624	5	37,174,319,109,1267,	0,4926,5569,17173,18306,
#Partially deleted in new
chr19	56141726	56147209	chr19:56141726-56147209	0	+	56146911	56147209	789624	3	68,174,320,	0,4520,5163,
#Partially deleted in new
chr19	56143336	56147045	chr19:56143336-56147045	0	+	56146911	56147045	789624	3	255,174,156,	0,2910,3553,
#Partially deleted in new
chr19	56146087	56147142	chr19:56146087-56147142	0	+	56146911	56147142	789624	2	333,253,	0,802,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	56149816	56150490	chr19:56149816-56150490	3	+	56149816	56149816	8553170	1	674,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	56154300	56160886	chr19:56154300-56160886	0	+	56154300	56154300	8553170	2	4302,1263,	0,5323,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	56157308	56159967	chr19:56157308-56159967	0	+	56157308	56157308	8553170	3	238,109,341,	0,1185,2318,
#Partially deleted in new
chr19	56176019	56185775	chr19:56176019-56185775	3	+	56177108	56185270	789624	6	43,126,49,81,78,561,	0,1050,4566,6152,7115,9195,
#Partially deleted in new
chr19	56176019	56185775	chr19:56176019-56185775	1	+	56177108	56182234	789624	5	43,126,81,78,561,	0,1050,6152,7115,9195,
#Partially deleted in new
chr19	56177108	56182234	chr19:56177108-56182234	1	+	56177108	56182234	789624	2	87,63,	0,5063,
#Partially deleted in new
chr19	56189569	56197920	chr19:56189569-56197920	3	-	56189826	56193052	789624	5	1006,151,204,511,187,	0,1267,2280,3099,8164,
#Partially deleted in new
chr19	56189688	56193052	chr19:56189688-56193052	1	-	56189826	56193052	789624	4	887,151,204,384,	0,1148,2161,2980,
#Partially deleted in new
chr19	56191929	56197793	chr19:56191929-56197793	0	-	56191929	56193052	789624	3	124,386,60,	0,739,5804,
#Partially deleted in new
chr19	56192026	56197815	chr19:56192026-56197815	0	-	56192026	56193052	789624	4	27,386,60,82,	0,642,1093,5707,
#Partially deleted in new
chr19	56202300	56209452	chr19:56202300-56209452	3	+	56205913	56209200	789624	5	22,511,204,151,1004,	0,3486,4758,5733,6148,
#Deleted in new
chr19	56205913	56209200	chr19:56205913-56209200	1	+	56205913	56209200	789624	4	384,204,151,752,	0,1145,2120,2535,
#Deleted in new
chr19	56217167	56217777	chr19:56217167-56217777	7	-	56217167	56217167	16724991	1	610,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	56219669	56228290	chr19:56219669-56228290	1	-	56221574	56225046	789624	5	2657,151,204,511,39,	0,2921,3961,4993,8582,
#Partially deleted in new
chr19	56221311	56368383	chr19:56221311-56368383	3	-	56221574	56225046	789624	7	1015,151,204,386,355,164,175,	0,1279,2319,3351,94602,141923,146897,
#Partially deleted in new
chr19	56221311	56228311	chr19:56221311-56228311	1	-	56221574	56225046	789624	5	1012,151,204,386,60,	0,1279,2319,3351,6940,
#Deleted in new
chr19	56224321	56225429	chr19:56224321-56225429	0	-	56224321	56224321	8553170	1	1108,	0,
#Deleted in new
chr19	56244042	56247482	chr19:56244042-56247482	7	+	56244042	56244042	16724991	4	384,204,151,749,	0,1179,2273,2691,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	56266217	56266761	chr19:56266217-56266761	0	-	56266217	56266217	8553170	1	544,	0,
#Partially deleted in new
chr19	56272768	56302043	chr19:56272768-56302043	0	+	56272834	56285006	789624	6	151,26,27,27,31,76,	0,10226,12229,23567,24736,29199,
#Partially deleted in new
chr19	56272768	56310450	chr19:56272768-56310450	3	+	56272834	56310148	789624	15	151,18,6,9,9,27,54,18,6,9,27,27,128,38,327,	0,3323,8924,9722,11429,12229,15616,16105,18072,23190,23567,24736,29199,32024,37355,
#Partially deleted in new
chr19	56284133	56286680	chr19:56284133-56286680	0	+	56284133	56284133	8553170	3	73,27,299,	0,864,2248,
#Partially deleted in new
chr19	56284180	56310450	chr19:56284180-56310450	0	+	56284180	56284180	8553170	9	26,27,87,9,27,27,128,57,327,	0,817,10886,11778,12155,13324,17787,20593,25943,
#Partially deleted in new
chr19	56295827	56297869	chr19:56295827-56297869	0	+	56295827	56295827	8553170	3	140,80,365,	0,508,1677,
#Partially deleted in new
chr19	56298090	56302077	chr19:56298090-56302077	0	+	56298090	56298090	8553170	3	135,146,110,	0,1739,3877,
#Partially deleted in new
chr19	56301935	56310446	chr19:56301935-56310446	0	+	56301935	56301935	8553170	3	160,57,323,	0,2838,8188,
#Partially deleted in new
chr19	56301989	56310450	chr19:56301989-56310450	0	+	56301989	56302853	789624	4	106,142,57,327,	0,852,2784,8134,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	56311927	56312486	chr19:56311927-56312486	3	-	56311927	56311927	8553170	1	559,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	56314702	56341287	chr19:56314702-56341287	1	+	56314702	56314702	8553170	3	284,201,502,	0,23602,26083,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	56315253	56316803	chr19:56315253-56316803	3	+	56315253	56315253	8553170	1	1550,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	56315598	56341005	chr19:56315598-56341005	1	+	56315598	56315598	8553170	3	44,201,220,	0,22706,25187,
#Deleted in new
chr19	56317176	56318008	chr19:56317176-56318008	7	-	56317176	56317176	16724991	1	832,	0,
#Partially deleted in new
chr19	56319789	56322310	chr19:56319789-56322310	7	-	56319789	56319789	16724991	2	496,1675,	0,846,
#Partially deleted in new
chr19	56338287	56338648	chr19:56338287-56338648	7	-	56338287	56338287	16724991	1	361,	0,
#Partially deleted in new
chr19	56342431	56343419	chr19:56342431-56343419	7	-	56342431	56342431	16724991	1	988,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	56347080	56348183	chr19:56347080-56348183	3	-	56347080	56347080	8553170	1	1103,	0,
#Partially deleted in new
chr19	56354492	56365949	chr19:56354492-56365949	3	-	56354492	56354492	8553170	4	149,164,102,234,	0,8742,10463,11223,
#Partially deleted in new
chr19	56363175	56364997	chr19:56363175-56364997	0	-	56363175	56363175	8553170	2	223,42,	0,1780,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	56365714	56368053	chr19:56365714-56368053	1	-	56365714	56365714	8553170	3	235,132,199,	0,1514,2140,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	56368098	56379528	chr19:56368098-56379528	5	+	56368098	56368098	16724991	7	125,71,59,127,93,72,2662,	0,767,1180,5058,5432,6587,8768,
#Partially deleted in new
chr19	56368120	56376971	chr19:56368120-56376971	4	+	56368120	56368120	16724991	6	100,71,59,127,93,105,	0,745,1158,5036,5410,8746,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	56368138	56379553	chr19:56368138-56379553	4	+	56368138	56368138	16724991	6	322,71,127,93,140,2687,	0,727,5018,5392,6547,8728,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	56368138	56377366	chr19:56368138-56377366	4	+	56368138	56368138	16724991	6	82,71,127,93,72,500,	0,727,5018,5392,6547,8728,
#Partially deleted in new
chr19	56368172	56377208	chr19:56368172-56377208	4	+	56368172	56368172	16724991	6	288,71,59,127,93,342,	0,693,1106,4984,5358,8694,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	56368318	56378350	chr19:56368318-56378350	4	+	56368318	56368318	16724991	6	142,71,127,93,72,1484,	0,547,4838,5212,6367,8548,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	56368320	56379828	chr19:56368320-56379828	7	+	56368320	56368320	16724991	5	140,71,127,93,2962,	0,545,4836,5210,8546,
#Partially deleted in new
chr19	56368335	56373757	chr19:56368335-56373757	4	+	56368335	56368335	16724991	4	125,71,127,227,	0,530,4821,5195,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	56368389	56374272	chr19:56368389-56374272	4	+	56368389	56368389	16724991	5	77,71,59,127,742,	0,476,889,4767,5141,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	56368644	56374719	chr19:56368644-56374719	4	+	56368644	56368644	16724991	4	292,127,93,34,	0,4512,4886,6041,
#Partially deleted in new
chr19	56368647	56376929	chr19:56368647-56376929	4	+	56368647	56368647	16724991	4	289,127,93,63,	0,4509,4883,8219,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	56373249	56377972	chr19:56373249-56377972	5	+	56373249	56373249	16724991	4	34,93,72,1106,	0,281,1436,3617,
#Partially deleted in new
chr19	56375845	56393478	chr19:56375845-56393478	0	-	56376043	56391752	789624	5	276,96,127,89,37,	0,14155,14529,15898,17596,
#Deleted in new
chr19	56376703	56377284	chr19:56376703-56377284	3	-	56376703	56376703	8553170	1	581,	0,
#Deleted in new
chr19	56377036	56377792	chr19:56377036-56377792	7	-	56377036	56377036	16724991	1	756,	0,
#Partially deleted in new
chr19	56382751	56393520	chr19:56382751-56393520	3	-	56383862	56391752	789624	5	2433,96,127,89,79,	0,7249,7623,8992,10690,
#Partially deleted in new
chr19	56383278	56393520	chr19:56383278-56393520	1	-	56383862	56391752	789624	5	1906,96,127,89,79,	0,6722,7096,8465,10163,
#Partially deleted in new
chr19	56383769	56393545	chr19:56383769-56393545	1	-	56383862	56391752	789624	5	1415,96,127,89,326,	0,6231,6605,7974,9450,
#Partially deleted in new
chr19	56384872	56393328	chr19:56384872-56393328	0	-	56384872	56391752	789624	5	312,96,127,89,109,	0,5128,5502,6871,8347,
#Partially deleted in new
chr19	56384881	56393538	chr19:56384881-56393538	0	-	56384881	56391752	789624	5	303,96,127,89,97,	0,5119,5493,6862,8560,
#Deleted in new
chr19	56386225	56386690	chr19:56386225-56386690	7	+	56386225	56386225	16724991	1	465,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	56387411	56388424	chr19:56387411-56388424	3	+	56387411	56387411	8553170	2	287,165,	0,848,
#Deleted in new
chr19	56389997	56393430	chr19:56389997-56393430	0	-	56389997	56391752	789624	4	99,127,89,194,	0,377,1746,3239,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	56393655	56398152	chr19:56393655-56398152	0	+	56393655	56393655	8553170	3	21,225,272,	0,561,4225,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	56393732	56399168	chr19:56393732-56399168	1	+	56393732	56393732	789624	4	321,225,168,892,	0,484,4148,4544,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	56393746	56399172	chr19:56393746-56399172	0	+	56393746	56393746	789624	2	307,1292,	0,4134,
#Deleted in new
chr19	56393810	56394433	chr19:56393810-56394433	0	+	56393810	56393810	8553170	2	228,217,	0,406,
#Partially deleted in new
chr19	56404013	56425031	chr19:56404013-56425031	1	+	56407114	56424368	789624	5	76,98,127,96,2141,	0,3012,9945,10331,18877,
#Partially deleted in new
chr19	56404013	56423047	chr19:56404013-56423047	0	+	56407114	56423047	789624	5	76,98,127,96,157,	0,3012,9945,10331,18877,
#Partially deleted in new
chr19	56404329	56414393	chr19:56404329-56414393	0	+	56404329	56404329	8553170	3	123,98,435,	0,2696,9629,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	56404331	56427364	chr19:56404331-56427364	3	+	56407114	56424368	789624	5	121,98,127,96,4474,	0,2694,9627,10013,18559,
#Partially deleted in new
chr19	56404348	56423070	chr19:56404348-56423070	0	+	56407114	56423070	789624	5	81,98,127,96,180,	0,2677,9610,9996,18542,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	56404355	56414800	chr19:56404355-56414800	0	+	56404355	56404355	8553170	4	97,98,127,456,	0,2670,9603,9989,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	56423149	56436035	chr19:56423149-56436035	0	+	56423149	56423149	8553170	2	653,2257,	0,10629,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	56439324	56477374	chr19:56439324-56477374	3	-	56441161	56462370	789624	5	3417,93,127,92,103,	0,18830,21364,23013,37947,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	56439324	56477330	chr19:56439324-56477330	1	-	56441161	56462370	789624	7	3417,93,127,92,489,113,59,	0,18830,21364,23013,32374,34687,37947,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	56439324	56473068	chr19:56439324-56473068	1	-	56444150	56462370	789624	6	3417,151,93,127,92,1370,	0,4806,18830,21364,23013,32374,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	56439329	56477367	chr19:56439329-56477367	0	-	56449634	56462370	789624	6	3412,101,93,127,92,96,	0,10227,18825,21359,23008,37942,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	56439329	56442747	chr19:56439329-56442747	1	-	56441161	56442340	789624	2	1321,1944,	0,1474,
#Partially deleted in new
chr19	56442519	56478065	chr19:56442519-56478065	0	-	56442519	56462370	789624	5	222,93,127,92,33,	0,15635,18169,19818,35513,
#Partially deleted in new
chr19	56458154	56477118	chr19:56458154-56477118	0	-	56458154	56462370	789624	4	93,127,92,210,	0,2534,4183,18754,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	56467718	56475901	chr19:56467718-56475901	0	-	56467718	56467718	8553170	3	1217,486,1890,	0,3980,6293,
#Deleted in new
chr19	56477249	56478687	chr19:56477249-56478687	0	+	56477249	56477249	8553170	1	1438,	0,
#Partially deleted in new
chr19	56477602	56494307	chr19:56477602-56494307	1	+	56477602	56477602	8553170	2	323,145,	0,16560,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	56478130	56495432	chr19:56478130-56495432	1	+	56478130	56478130	789624	2	251,1270,	0,16032,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	56478154	56495318	chr19:56478154-56495318	1	+	56478154	56478154	8553170	3	227,180,271,	0,16008,16893,
#Partially deleted in new
chr19	56478156	56494327	chr19:56478156-56494327	1	+	56478156	56478156	8553170	3	120,190,165,	0,13420,16006,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	56478182	56500666	chr19:56478182-56500666	3	+	56478182	56478182	8553170	3	199,149,573,	0,19118,21911,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	56478182	56495441	chr19:56478182-56495441	1	+	56478182	56478182	8553170	3	94,180,394,	0,15980,16865,
#Partially deleted in new
chr19	56478189	56494319	chr19:56478189-56494319	1	+	56478189	56478189	8553170	3	188,190,157,	0,13387,15973,
#Partially deleted in new
chr19	56478239	56494603	chr19:56478239-56494603	1	+	56478239	56478239	8553170	2	54,441,	0,15923,
#Partially deleted in new
chr19	56480396	56483977	chr19:56480396-56483977	3	-	56480396	56480396	8553170	2	149,182,	0,3399,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	56485922	56494280	chr19:56485922-56494280	7	-	56485922	56485922	16724991	4	167,95,130,215,	0,2023,5204,8143,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	56507842	56530221	chr19:56507842-56530221	3	+	56511571	56525948	789624	5	78,88,127,96,5898,	0,3674,8432,10639,16481,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	56507849	56530221	chr19:56507849-56530221	1	+	56511571	56525232	789624	5	71,88,127,96,5477,	0,3667,8425,10632,16895,
#Partially deleted in new
chr19	56510096	56526021	chr19:56510096-56526021	0	+	56510096	56510096	8553170	2	217,322,	0,15603,
#Partially deleted in new
chr19	56510621	56518551	chr19:56510621-56518551	0	+	56511571	56518551	789624	4	279,88,127,70,	0,895,5653,7860,
#Deleted in new
chr19	56535298	56535763	chr19:56535298-56535763	3	+	56535298	56535298	8553170	1	465,	0,
#Partially deleted in new
chr19	56536155	56538418	chr19:56536155-56538418	1	-	56536155	56536155	8553170	3	177,87,62,	0,1495,2201,
#Partially deleted in new
chr19	56536157	56538375	chr19:56536157-56538375	0	-	56536157	56536157	8553170	3	175,87,123,	0,1493,2095,
#Partially deleted in new
chr19	56536157	56538575	chr19:56536157-56538575	3	-	56536157	56536157	8553170	3	175,87,151,	0,1493,2267,
#Partially deleted in new
chr19	56536157	56538315	chr19:56536157-56538315	0	-	56536157	56536157	8553170	3	175,87,68,	0,1493,2090,
#Deleted in new
chr19	56537647	56538431	chr19:56537647-56538431	1	-	56537647	56537647	8553170	1	784,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr19	56538947	56556810	chr19:56538947-56556810	3	+	56539018	56555392	0	8	279,92,127,96,164,115,96,3127,	0,677,8560,8859,10010,11119,11562,14736,
#Partially deleted in new
chr19	56538952	56553116	chr19:56538952-56553116	1	+	56539018	56550757	0	7	274,92,127,96,164,115,2607,	0,672,8555,8854,10005,11114,11557,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	56539068	56544737	chr19:56539068-56544737	0	+	56539068	56539068	8553170	3	158,92,202,	0,556,5467,
#Partially deleted in new
chr19	56539129	56548977	chr19:56539129-56548977	0	+	56539129	56548406	789624	6	97,92,127,96,101,20,	0,495,8378,8677,9248,9828,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	56545565	56567411	chr19:56545565-56567411	3	-	56545565	56545565	8553170	2	1706,339,	0,21507,
#Deleted in new
chr19	56550445	56551029	chr19:56550445-56551029	0	+	56550445	56550445	8553170	1	584,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	56567510	56582894	chr19:56567510-56582894	3	+	56570311	56578583	789624	6	528,126,92,127,96,6182,	0,1247,2769,6883,7127,9202,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	56567525	56588911	chr19:56567525-56588911	1	+	56570311	56588251	789624	6	513,126,92,127,96,686,	0,1232,2754,6868,7112,20700,
#Partially deleted in new
chr19	56567648	56588406	chr19:56567648-56588406	0	+	56567648	56567648	8553170	6	390,126,92,96,93,181,	0,1109,2631,6989,16371,20577,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	56570174	56582893	chr19:56570174-56582893	1	+	56570311	56578583	789624	4	197,127,96,6181,	0,4219,4463,6538,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	56574646	56582895	chr19:56574646-56582895	0	+	56574646	56582602	789624	2	87,346,	0,7903,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	56586634	56588908	chr19:56586634-56588908	0	+	56586634	56586634	8553170	1	2274,	0,
#Deleted in new
chr19	56589494	56590281	chr19:56589494-56590281	7	-	56589494	56589494	16724991	2	229,322,	0,465,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	56595263	56624466	chr19:56595263-56624466	3	+	56601558	56622757	789624	4	165,85,127,3199,	0,6243,18548,26004,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	56595299	56626481	chr19:56595299-56626481	1	+	56621287	56622757	789624	3	129,85,5214,	0,6207,25968,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	56595334	56610543	chr19:56595334-56610543	0	+	56595334	56595334	8553170	3	94,85,579,	0,6172,14630,
#Partially deleted in new
chr19	56643144	56655766	chr19:56643144-56655766	3	+	56645667	56655213	789624	4	66,269,77,664,	0,2423,4413,11958,
#Partially deleted in new
chr19	56643162	56655358	chr19:56643162-56655358	1	+	56645667	56655245	789624	3	48,269,256,	0,2405,11940,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	56661980	56671760	chr19:56661980-56671760	3	-	56663584	56665198	789624	2	3265,185,	0,9595,
#Partially deleted in new
chr19	56664921	56671783	chr19:56664921-56671783	0	-	56664921	56665198	789624	2	324,183,	0,6679,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	56672267	56684653	chr19:56672267-56684653	3	+	56672267	56672267	8553170	2	164,353,	0,12033,
#Deleted in new
chr19	56672573	56673901	chr19:56672573-56673901	3	-	56672573	56672573	8553170	1	1328,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	56690685	56761135	chr19:56690685-56761135	5	+	56690685	56690685	16724991	4	60,58,153,160,	0,19113,69131,70290,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	56706824	56760547	chr19:56706824-56760547	6	+	56706824	56706824	16724991	4	90,58,153,145,	0,2974,52992,53578,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	56707292	56791197	chr19:56707292-56791197	3	+	56707292	56707292	8553170	4	208,58,151,143,	0,2506,82635,83762,
#Partially deleted in new
chr19	56760932	56761215	chr19:56760932-56761215	5	+	56760932	56760932	16724991	1	283,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	56765343	56799646	chr19:56765343-56799646	3	+	56765343	56765343	789624	4	71,151,253,1654,	0,24584,25711,32649,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	56765372	56798379	chr19:56765372-56798379	0	+	56765372	56765372	8553170	2	42,387,	0,32620,
#Partially deleted in new
chr19	56774546	56840726	chr19:56774546-56840726	3	-	56774687	56824277	789624	11	983,96,169,80,103,104,84,90,166,87,145,	0,4830,7406,15325,44053,47104,48206,49043,49715,61471,66035,
#Partially deleted in new
chr19	56774561	56840729	chr19:56774561-56840729	1	-	56774687	56824277	789624	12	968,96,169,80,103,104,84,90,253,76,87,143,	0,4815,7391,15310,44038,47089,48191,49028,49700,51826,61456,66025,
#Partially deleted in new
chr19	56774593	56836078	chr19:56774593-56836078	0	-	56782459	56824277	789624	12	936,96,169,72,80,93,103,104,84,90,166,61,	0,4783,7359,7806,15278,43152,44006,47057,48159,48996,49668,61424,
#Partially deleted in new
chr19	56774593	56836078	chr19:56774593-56836078	0	-	56782459	56824277	789624	12	936,96,169,72,80,103,104,84,90,166,76,61,	0,4783,7359,7806,15278,44006,47057,48159,48996,49668,51794,61424,
#Partially deleted in new
chr19	56774593	56840729	chr19:56774593-56840729	1	-	56774687	56824277	789624	12	936,96,169,80,103,104,84,90,253,76,87,148,	0,4783,7359,15278,44006,47057,48159,48996,49668,51794,61424,65988,
#Partially deleted in new
chr19	56774593	56836078	chr19:56774593-56836078	1	-	56774687	56824277	789624	11	936,96,169,80,103,104,84,90,166,76,61,	0,4783,7359,15278,44006,47057,48159,48996,49668,51794,61424,
#Partially deleted in new
chr19	56774625	56840711	chr19:56774625-56840711	0	-	56782459	56824655	8553170	13	904,96,169,72,80,103,104,84,90,480,76,87,130,	0,4751,7327,7774,15246,43974,47025,48127,48964,49636,51762,61392,65956,
#Partially deleted in new
chr19	56775378	56782266	chr19:56775378-56782266	0	-	56775378	56775378	8553170	3	151,96,314,	0,3998,6574,
#Partially deleted in new
chr19	56793047	56793249	chr19:56793047-56793249	7	-	56793047	56793047	16724991	1	202,	0,
#Partially deleted in new
chr19	56810076	56840726	chr19:56810076-56840726	3	-	56813674	56824655	0	10	7503,90,103,104,84,87,480,76,87,145,	0,7669,8523,11574,12676,13516,14185,16311,25941,30505,
#Partially deleted in new
chr19	56810076	56840726	chr19:56810076-56840726	1	-	56813674	56824277	8553170	10	7503,93,103,104,84,90,166,76,87,145,	0,7669,8523,11574,12676,13513,14185,16311,25941,30505,
#Partially deleted in new
chr19	56810090	56811283	chr19:56810090-56811283	0	-	56810090	56810090	8553170	2	67,251,	0,942,
#Partially deleted in new
chr19	56810101	56840728	chr19:56810101-56840728	1	-	56813674	56824277	8553170	11	7478,93,103,104,84,90,166,76,131,87,147,	0,7644,8498,11549,12651,13488,14160,16286,23188,25916,30480,
#Partially deleted in new
chr19	56810120	56840726	chr19:56810120-56840726	1	-	56813674	56824277	8553170	10	7459,93,103,104,84,90,166,76,87,140,	0,7625,8479,11530,12632,13469,14141,16267,25897,30466,
#Partially deleted in new
chr19	56810120	56840726	chr19:56810120-56840726	1	-	56813674	56824277	8553170	11	7459,93,103,104,84,90,166,76,139,87,145,	0,7625,8479,11530,12632,13469,14141,16267,19662,25897,30461,
#Partially deleted in new
chr19	56810186	56837818	chr19:56810186-56837818	1	-	56813674	56824277	8553170	9	7393,93,103,104,84,90,166,87,67,	0,7559,8413,11464,12566,13403,14075,25831,27565,
#Partially deleted in new
chr19	56810917	56840726	chr19:56810917-56840726	1	-	56813674	56824277	8553170	11	6662,93,103,104,84,90,166,131,121,87,145,	0,6828,7682,10733,11835,12672,13344,22372,22725,25100,29664,
#Partially deleted in new
chr19	56811080	56840726	chr19:56811080-56840726	1	-	56813674	56824277	8553170	11	6499,93,103,104,84,90,253,76,113,87,145,	0,6665,7519,10570,11672,12509,13181,15307,16053,24937,29501,
#Partially deleted in new
chr19	56812157	56840661	chr19:56812157-56840661	1	-	56817701	56824277	8553170	8	5681,103,104,84,90,166,87,75,	0,6442,9493,10595,11432,12104,23860,28429,
#Partially deleted in new
chr19	56812818	56840726	chr19:56812818-56840726	1	-	56813674	56824277	8553170	8	4761,103,104,84,90,253,87,145,	0,5781,8832,9934,10771,11443,23199,27763,
#Partially deleted in new
chr19	56813147	56840726	chr19:56813147-56840726	1	-	56813674	56824277	0	9	4432,93,103,104,84,90,166,87,145,	0,4598,5452,8503,9605,10442,11114,22870,27434,
#Partially deleted in new
chr19	56813674	56840696	chr19:56813674-56840696	1	-	56813674	56824277	0	9	3905,90,103,104,84,87,166,87,115,	0,4071,4925,7976,9078,9918,10587,22343,26907,
#Partially deleted in new
chr19	56813677	56825006	chr19:56813677-56825006	0	-	56813677	56824655	0	7	3902,90,103,104,84,87,745,	0,4068,4922,7973,9075,9915,10584,
#Partially deleted in new
chr19	56813677	56840696	chr19:56813677-56840696	0	-	56813677	56824655	0	9	3902,90,103,104,84,87,480,87,115,	0,4068,4922,7973,9075,9915,10584,22340,26904,
#Partially deleted in new
chr19	56814387	56833747	chr19:56814387-56833747	0	-	56814387	56824277	8553170	11	3192,93,103,104,84,90,166,76,113,131,105,	0,3358,4212,7263,8365,9202,9874,12000,12746,18902,19255,
#Partially deleted in new
chr19	56816789	56824648	chr19:56816789-56824648	0	-	56816789	56824648	789624	6	790,103,104,84,90,387,	0,1810,4861,5963,6800,7472,
#Partially deleted in new
chr19	56822496	56824314	chr19:56822496-56824314	1	-	56822741	56824277	789624	3	340,90,53,	0,1093,1765,
#Partially deleted in new
chr19	56824545	56840709	chr19:56824545-56840709	0	-	56824545	56824655	789624	3	196,87,128,	0,11472,16036,
#Partially deleted in new
chr19	56840901	56848556	chr19:56840901-56848556	3	+	56840901	56840901	789624	2	685,605,	0,7050,
#Partially deleted in new
chr19	56841248	56842298	chr19:56841248-56842298	1	+	56841248	56841248	8553170	1	1050,	0,
#Partially deleted in new
chr19	56848067	56848204	chr19:56848067-56848204	3	+	56848067	56848067	8553170	1	137,	0,
#Partially deleted in new
chr19	56922017	56922213	chr19:56922017-56922213	7	+	56922017	56922017	16724991	1	196,	0,
#Deleted in new
chr19	57065333	57066139	chr19:57065333-57066139	7	+	57065333	57065333	16724991	1	806,	0,
#Deleted in new
chr19	57111119	57112027	chr19:57111119-57112027	7	-	57111119	57111119	16724991	1	908,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57119137	57128767	chr19:57119137-57128767	0	+	57128675	57128767	789624	4	84,150,95,108,	0,3187,4907,9522,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57120042	57131926	chr19:57120042-57131926	3	+	57128675	57131444	789624	4	187,150,101,3267,	0,2282,3996,8617,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57120090	57128714	chr19:57120090-57128714	0	+	57128675	57128714	789624	4	227,150,101,55,	0,2234,3948,8569,
#Deleted in new
chr19	57128642	57131926	chr19:57128642-57131926	1	+	57128675	57131444	789624	1	3284,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	57134095	57145202	chr19:57134095-57145202	3	-	57134917	57142643	789624	5	2000,99,127,57,344,	0,2777,4376,8533,10763,
#Partially deleted in new
chr19	57150512	57150978	chr19:57150512-57150978	7	+	57150512	57150512	16724991	1	466,	0,
#Partially deleted in new
chr19	57151586	57151860	chr19:57151586-57151860	7	-	57151586	57151586	16724991	1	274,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	57154020	57167443	chr19:57154020-57167443	3	-	57154411	57167443	789624	6	462,106,146,112,155,25,	0,1246,4307,5146,6622,13398,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	57175232	57177921	chr19:57175232-57177921	7	+	57175232	57175232	16724991	3	1309,439,324,	0,1623,2365,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57191499	57222846	chr19:57191499-57222846	3	+	57191913	57212981	789624	4	447,127,96,11493,	0,2375,13897,19854,
#Partially deleted in new
chr19	57191500	57193958	chr19:57191500-57193958	0	+	57191913	57193958	789624	3	27,248,84,	0,198,2374,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	57191500	57194969	chr19:57191500-57194969	1	+	57191913	57194863	789624	3	446,127,201,	0,2374,3268,
#Partially deleted in new
chr19	57191522	57211483	chr19:57191522-57211483	0	+	57191913	57211483	789624	3	424,127,130,	0,2352,19831,
#Partially deleted in new
chr19	57191536	57194169	chr19:57191536-57194169	1	+	57191913	57194036	789624	2	410,295,	0,2338,
#Partially deleted in new
chr19	57191774	57213119	chr19:57191774-57213119	1	+	57191913	57212981	789624	5	16,73,127,96,1766,	0,99,2100,13622,19579,
#Partially deleted in new
chr19	57230801	57235547	chr19:57230801-57235547	1	+	57231785	57235417	789624	8	319,46,192,139,132,15,174,301,	0,940,1231,1740,2658,2792,4083,4445,
#Partially deleted in new
chr19	57231008	57235417	chr19:57231008-57235417	1	+	57231113	57235417	789624	7	106,46,192,139,149,175,171,	0,733,1024,1533,2451,3875,4238,
#Partially deleted in new
chr19	57231062	57235548	chr19:57231062-57235548	3	+	57231248	57235417	789624	7	244,46,192,139,149,175,302,	0,679,970,1479,2397,3821,4184,
#Partially deleted in new
chr19	57231139	57235548	chr19:57231139-57235548	0	+	57231248	57231389	789624	6	648,192,144,149,175,302,	0,893,1402,2320,3744,4107,
#Partially deleted in new
chr19	57231248	57235417	chr19:57231248-57235417	1	+	57231248	57235417	789624	7	58,37,192,139,149,175,171,	0,502,784,1293,2211,3635,3998,
#Partially deleted in new
chr19	57231618	57235547	chr19:57231618-57235547	1	+	57231785	57235417	789624	6	169,192,139,149,175,301,	0,414,923,1841,3265,3628,
#Partially deleted in new
chr19	57231727	57235403	chr19:57231727-57235403	0	+	57231785	57233463	789624	6	60,192,144,149,175,157,	0,305,814,1732,3156,3519,
#Partially deleted in new
chr19	57232617	57235548	chr19:57232617-57235548	0	+	57232617	57235417	789624	3	68,175,302,	0,2266,2629,
#Partially deleted in new
chr19	57240684	57255135	chr19:57240684-57255135	1	+	57253218	57254703	789624	3	237,96,2063,	0,7920,12388,
#Partially deleted in new
chr19	57240891	57254703	chr19:57240891-57254703	3	+	57240891	57254703	789624	4	30,127,96,1631,	0,3031,7713,12181,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	57261353	57262738	chr19:57261353-57262738	3	+	57261353	57261353	8553170	1	1385,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	57267375	57280334	chr19:57267375-57280334	0	-	57267375	57267375	789624	3	337,122,56,	0,9559,12903,
#Partially deleted in new
chr19	57280050	57292534	chr19:57280050-57292534	1	+	57284643	57292230	789624	3	74,127,1836,	0,4500,10648,
#Partially deleted in new
chr19	57280484	57293569	chr19:57280484-57293569	3	+	57280806	57292230	789624	3	352,127,2871,	0,4066,10214,
#Partially deleted in new
chr19	57281886	57291045	chr19:57281886-57291045	0	+	57284643	57291045	789624	3	81,127,347,	0,2664,8812,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	57293082	57294469	chr19:57293082-57294469	3	-	57293082	57293082	8553170	1	1387,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	57304304	57308562	chr19:57304304-57308562	3	+	57304304	57304304	8553170	1	4258,	0,
#Partially deleted in new
chr19	57317207	57317562	chr19:57317207-57317562	7	-	57317207	57317207	16724991	1	355,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57320508	57330776	chr19:57320508-57330776	3	+	57320853	57329265	789624	4	363,127,96,3073,	0,3173,6124,7195,
#Deleted in new
chr19	57350847	57352012	chr19:57350847-57352012	3	-	57350847	57350847	8553170	2	512,533,	0,632,
#Partially deleted in new
chr19	57351306	57359898	chr19:57351306-57359898	3	+	57351664	57357849	789624	4	111,206,127,3869,	0,185,2418,4723,
#Partially deleted in new
chr19	57351325	57358780	chr19:57351325-57358780	1	+	57351664	57357849	789624	4	372,127,141,2751,	0,2399,3945,4704,
#Partially deleted in new
chr19	57351325	57358780	chr19:57351325-57358780	1	+	57353817	57357849	789624	4	372,81,127,2751,	0,1329,2399,4704,
#Partially deleted in new
chr19	57351491	57359898	chr19:57351491-57359898	1	+	57351664	57357849	789624	3	206,127,3869,	0,2233,4538,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	57363476	57377211	chr19:57363476-57377211	0	+	57368555	57371086	789624	5	227,36,122,127,84,	0,5067,7496,8305,13651,
#Partially deleted in new
chr19	57363510	57365353	chr19:57363510-57365353	3	+	57364833	57365256	789624	2	193,539,	0,1304,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57363565	57379565	chr19:57363565-57379565	3	+	57368555	57378185	789624	4	138,36,127,2438,	0,4978,8216,13562,
#Partially deleted in new
chr19	57363565	57398584	chr19:57363565-57398584	3	+	57368555	57398584	789624	4	138,36,127,155,	0,4978,8216,34864,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	57363566	57365309	chr19:57363566-57365309	1	+	57364833	57365256	789624	1	1743,	0,
#Partially deleted in new
chr19	57368078	57371882	chr19:57368078-57371882	0	+	57368555	57371882	789624	2	501,101,	0,3703,
#Partially deleted in new
chr19	57371628	57377417	chr19:57371628-57377417	0	+	57371754	57377417	789624	2	280,290,	0,5499,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	57389849	57402992	chr19:57389849-57402992	3	+	57390099	57399889	789624	3	265,127,4563,	0,7198,8580,
#Partially deleted in new
chr19	57389874	57398450	chr19:57389874-57398450	0	+	57394199	57398450	789624	4	240,181,127,21,	0,4168,7173,8555,
#Partially deleted in new
chr19	57389874	57398598	chr19:57389874-57398598	1	+	57390099	57398426	789624	4	240,36,127,186,	0,4313,7173,8538,
#Partially deleted in new
chr19	57389883	57418012	chr19:57389883-57418012	0	+	57390099	57418012	789624	5	231,36,127,41,101,	0,4304,7164,23712,28028,
#Partially deleted in new
chr19	57389883	57397351	chr19:57389883-57397351	1	+	57390099	57397260	789624	3	231,36,304,	0,4304,7164,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57389896	57400163	chr19:57389896-57400163	1	+	57390099	57399889	789624	4	218,36,127,1734,	0,4291,7151,8533,
#Partially deleted in new
chr19	57389964	57398535	chr19:57389964-57398535	0	+	57390099	57392929	789624	5	150,148,36,127,106,	0,2836,4223,7083,8465,
#Partially deleted in new
chr19	57389986	57411167	chr19:57389986-57411167	0	+	57389986	57389986	8553170	4	128,36,127,288,	0,4201,7061,20893,
#Partially deleted in new
chr19	57390004	57398714	chr19:57390004-57398714	0	+	57390099	57397064	789624	5	110,124,36,127,285,	0,717,4183,7043,8425,
#Partially deleted in new
chr19	57390004	57397164	chr19:57390004-57397164	0	+	57390099	57392832	789624	5	110,124,148,36,117,	0,717,2796,4183,7043,
#Partially deleted in new
chr19	57390007	57419994	chr19:57390007-57419994	3	+	57390099	57419994	789624	4	107,36,127,360,	0,4180,27904,29627,
#Partially deleted in new
chr19	57390282	57397157	chr19:57390282-57397157	0	+	57394199	57397157	789624	5	134,124,148,36,110,	0,439,2518,3905,6765,
#Partially deleted in new
chr19	57390452	57398436	chr19:57390452-57398436	0	+	57390788	57398436	789624	4	393,36,127,7,	0,3735,6595,7977,
#Partially deleted in new
chr19	57390745	57398621	chr19:57390745-57398621	0	+	57394199	57398621	789624	5	100,161,36,127,192,	0,2042,3442,6302,7684,
#Deleted in new
chr19	57396904	57398818	chr19:57396904-57398818	0	+	57396904	57396904	8553170	2	270,389,	0,1525,
#Partially deleted in new
chr19	57411162	57419823	chr19:57411162-57419823	0	+	57411162	57411162	8553170	2	244,189,	0,8472,
#Partially deleted in new
chr19	57411163	57421939	chr19:57411163-57421939	1	+	57413615	57421481	789624	4	243,41,127,2305,	0,2432,6748,8471,
#Partially deleted in new
chr19	57411173	57419745	chr19:57411173-57419745	0	+	57411391	57411547	789624	3	478,41,111,	0,2422,8461,
#Partially deleted in new
chr19	57411178	57421803	chr19:57411178-57421803	3	+	57411391	57421481	789624	3	228,127,2169,	0,6733,8456,
#Partially deleted in new
chr19	57411180	57419900	chr19:57411180-57419900	0	+	57411180	57411180	8553170	3	226,41,266,	0,2415,8454,
#Partially deleted in new
chr19	57413372	57418038	chr19:57413372-57418038	0	+	57413615	57418038	789624	2	264,127,	0,4539,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	57419057	57421807	chr19:57419057-57421807	0	+	57419057	57419057	8553170	1	2750,	0,
#Partially deleted in new
chr19	57435328	57445485	chr19:57435328-57445485	3	+	57435578	57445485	789624	3	265,127,2195,	0,6556,7962,
#Partially deleted in new
chr19	57435342	57443607	chr19:57435342-57443607	0	+	57443409	57443607	789624	2	251,317,	0,7948,
#Partially deleted in new
chr19	57437969	57477503	chr19:57437969-57477503	3	-	57438040	57477309	789624	6	123,91,57,127,39,227,	0,17683,18156,37690,38664,39307,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	57449688	57453011	chr19:57449688-57453011	3	+	57449688	57449688	8553170	1	3323,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	57454789	57457142	chr19:57454789-57457142	3	-	57455424	57456486	789624	1	2353,	0,
#Deleted in new
chr19	57455378	57456239	chr19:57455378-57456239	0	-	57455378	57455378	8553170	2	365,114,	0,747,
#Partially deleted in new
chr19	57455447	57477536	chr19:57455447-57477536	0	-	57455447	57455447	8553170	4	296,57,39,260,	0,678,21186,21829,
#Deleted in new
chr19	57459911	57460120	chr19:57459911-57460120	7	+	57459911	57459911	16724991	1	209,	0,
#Partially deleted in new
chr19	57466662	57477551	chr19:57466662-57477551	1	-	57467040	57477309	789624	3	423,39,275,	0,9971,10614,
#Partially deleted in new
chr19	57466831	57477504	chr19:57466831-57477504	1	-	57467040	57477309	789624	2	254,228,	0,10445,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	57469585	57477570	chr19:57469585-57477570	3	-	57473273	57477309	789624	5	4836,123,127,39,294,	0,5438,6074,7048,7691,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	57469585	57477570	chr19:57469585-57477570	1	-	57473273	57474407	789624	2	4836,294,	0,7691,
#Partially deleted in new
chr19	57473044	57477532	chr19:57473044-57477532	1	-	57473273	57477309	789624	4	1377,127,39,256,	0,2615,3589,4232,
#Partially deleted in new
chr19	57473149	57477566	chr19:57473149-57477566	1	-	57474364	57477309	789624	3	1272,39,290,	0,3484,4127,
#Partially deleted in new
chr19	57473273	57477570	chr19:57473273-57477570	1	-	57473273	57476666	789624	6	919,61,114,127,39,294,	0,1087,1759,2386,3360,4003,
#Partially deleted in new
chr19	57473273	57477570	chr19:57473273-57477570	1	-	57473273	57477309	789624	5	925,61,99,127,294,	0,1087,1774,2386,4003,
#Partially deleted in new
chr19	57475736	57477520	chr19:57475736-57477520	0	-	57476486	57477309	789624	3	50,293,244,	0,643,1540,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	57477648	57482996	chr19:57477648-57482996	3	+	57477648	57477648	8553170	2	438,101,	0,5247,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	57477698	57482005	chr19:57477698-57482005	0	+	57477698	57477698	8553170	2	388,125,	0,4182,
#Partially deleted in new
chr19	57487710	57494090	chr19:57487710-57494090	1	+	57487950	57494090	789624	5	273,130,99,928,139,	0,3757,4402,5145,6241,
#Partially deleted in new
chr19	57487710	57494672	chr19:57487710-57494672	1	+	57487950	57494090	789624	4	273,130,99,1817,	0,3757,4402,5145,
#Partially deleted in new
chr19	57487717	57494220	chr19:57487717-57494220	1	+	57487950	57494090	789624	4	266,127,99,1365,	0,3753,4395,5138,
#Partially deleted in new
chr19	57487717	57492971	chr19:57487717-57492971	0	+	57491563	57492971	789624	4	266,55,130,116,	0,2413,3750,5138,
#Partially deleted in new
chr19	57487717	57492284	chr19:57487717-57492284	1	+	57487950	57492243	789624	3	266,130,172,	0,3750,4395,
#Partially deleted in new
chr19	57487717	57491739	chr19:57487717-57491739	0	+	57487950	57491739	789624	3	266,39,272,	0,2429,3750,
#Partially deleted in new
chr19	57487717	57505360	chr19:57487717-57505360	3	+	57487950	57504676	789624	4	266,127,130,59,	0,3753,16939,17584,
#Partially deleted in new
chr19	57487719	57491778	chr19:57487719-57491778	0	+	57487950	57491778	789624	2	264,308,	0,3751,
#Partially deleted in new
chr19	57487719	57494253	chr19:57487719-57494253	0	+	57487719	57487719	8553170	3	264,741,1398,	0,3751,5136,
#Partially deleted in new
chr19	57487721	57494648	chr19:57487721-57494648	1	+	57487950	57494090	789624	5	262,39,130,99,1793,	0,2425,3746,4391,5134,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57487740	57496097	chr19:57487740-57496097	3	+	57487950	57494090	789624	4	243,39,130,3242,	0,2406,3727,5115,
#Partially deleted in new
chr19	57487749	57494680	chr19:57487749-57494680	1	+	57487950	57494090	789624	3	234,127,1825,	0,3721,5106,
#Partially deleted in new
chr19	57487749	57491659	chr19:57487749-57491659	0	+	57487950	57491659	789624	3	234,39,189,	0,2397,3721,
#Partially deleted in new
chr19	57487752	57493055	chr19:57487752-57493055	0	+	57487950	57493055	789624	3	231,130,200,	0,3715,5103,
#Partially deleted in new
chr19	57487752	57505381	chr19:57487752-57505381	0	+	57487950	57504676	789624	4	231,127,127,80,	0,3718,16907,17549,
#Partially deleted in new
chr19	57487764	57494680	chr19:57487764-57494680	1	+	57487950	57494090	789624	5	219,39,127,99,1825,	0,2382,3706,4348,5091,
#Partially deleted in new
chr19	57487770	57492476	chr19:57487770-57492476	1	+	57487950	57492243	789624	4	213,39,130,364,	0,2376,3697,4342,
#Partially deleted in new
chr19	57487780	57493176	chr19:57487780-57493176	0	+	57487950	57493176	789624	4	203,39,127,321,	0,2366,3690,5075,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	57487964	57494665	chr19:57487964-57494665	0	+	57487964	57487964	8553170	3	3633,99,1810,	0,4148,4891,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57499914	57513144	chr19:57499914-57513144	1	+	57500080	57513068	789624	4	199,127,99,123,	0,4745,5387,13107,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57499934	57507971	chr19:57499934-57507971	1	+	57500080	57507424	789624	4	179,127,99,1614,	0,4725,5367,6423,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	57499938	57518404	chr19:57499938-57518404	1	+	57500080	57513068	789624	5	175,130,99,45,5383,	0,4718,5363,8581,13083,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57499940	57508161	chr19:57499940-57508161	3	+	57500080	57507424	789624	4	173,130,99,1804,	0,4716,5361,6417,
#Partially deleted in new
chr19	57504888	57506382	chr19:57504888-57506382	0	+	57504888	57504888	8553170	2	512,25,	0,1469,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	57527324	57540763	chr19:57527324-57540763	3	+	57527573	57538927	789624	3	282,127,3560,	0,7819,9879,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57527392	57540876	chr19:57527392-57540876	1	+	57527573	57538927	789624	4	214,39,127,3673,	0,3677,7751,9811,
#Partially deleted in new
chr19	57527420	57552754	chr19:57527420-57552754	1	+	57527573	57552393	789624	2	186,370,	0,24964,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57527425	57557542	chr19:57527425-57557542	1	+	57527573	57552500	789624	4	181,39,127,5158,	0,3644,7718,24959,
#Partially deleted in new
chr19	57535256	57559812	chr19:57535256-57559812	1	-	57535263	57559682	789624	4	135,96,127,157,	0,17370,20974,24399,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	57541835	57559863	chr19:57541835-57559863	3	-	57546974	57559682	789624	5	1408,1537,96,127,208,	0,4621,10791,14395,17820,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	57541839	57559863	chr19:57541839-57559863	1	-	57546974	57559682	789624	6	1404,933,1537,96,127,208,	0,1811,4617,10787,14391,17816,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	57541839	57559863	chr19:57541839-57559863	0	-	57546974	57559682	789624	6	1404,347,1537,96,127,208,	0,2397,4617,10787,14391,17816,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	57541839	57559863	chr19:57541839-57559863	0	-	57546974	57559682	789624	6	1404,933,1537,96,127,208,	0,1811,4617,10787,14391,17816,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	57542635	57547993	chr19:57542635-57547993	0	-	57546974	57547993	789624	2	1948,1537,	0,3821,
#Partially deleted in new
chr19	57546762	57556360	chr19:57546762-57556360	1	-	57546974	57556357	789624	2	1231,130,	0,9468,
#Partially deleted in new
chr19	57555997	57559860	chr19:57555997-57559860	0	-	57555997	57555997	8553170	2	360,205,	0,3658,
#Partially deleted in new
chr19	57571565	57578927	chr19:57571565-57578927	3	-	57572118	57578704	789624	4	2136,127,42,256,	0,4238,6491,7106,
#Partially deleted in new
chr19	57578455	57588625	chr19:57578455-57588625	0	+	57578455	57578455	8553170	2	485,87,	0,10083,
#Partially deleted in new
chr19	57583609	57590198	chr19:57583609-57590198	0	+	57584975	57590198	789624	4	366,39,127,188,	0,1342,4929,6401,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	57584139	57593777	chr19:57584139-57593777	1	+	57584356	57591275	789624	3	250,127,3767,	0,4399,5871,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57584141	57593777	chr19:57584141-57593777	3	+	57584356	57591275	789624	4	248,39,127,3767,	0,810,4397,5869,
#Partially deleted in new
chr19	57584144	57588615	chr19:57584144-57588615	0	+	57584975	57588615	789624	3	468,39,77,	0,807,4394,
#Partially deleted in new
chr19	57584144	57590214	chr19:57584144-57590214	0	+	57584356	57590214	789624	3	245,85,204,	0,4436,5866,
#Partially deleted in new
chr19	57584259	57592390	chr19:57584259-57592390	1	+	57584356	57590067	789624	2	130,2380,	0,5751,
#Partially deleted in new
chr19	57584259	57592390	chr19:57584259-57592390	1	+	57588631	57591275	789624	3	353,127,2380,	0,4279,5751,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	57599884	57608267	chr19:57599884-57608267	3	+	57600104	57607325	789624	3	250,130,2582,	0,4392,5801,
#Partially deleted in new
chr19	57599884	57605722	chr19:57599884-57605722	0	+	57604345	57605722	789624	4	250,52,130,37,	0,843,4392,5801,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57599884	57612722	chr19:57599884-57612722	0	+	57600104	57607325	789624	4	250,130,2142,220,	0,4392,5801,12618,
#Partially deleted in new
chr19	57599902	57612722	chr19:57599902-57612722	1	+	57604345	57612528	789624	4	232,52,130,220,	0,825,4374,12600,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	57604654	57609021	chr19:57604654-57609021	0	+	57604654	57604654	8553170	1	4367,	0,
#Partially deleted in new
chr19	57614232	57620447	chr19:57614232-57620447	0	+	57614232	57614232	8553170	2	271,288,	0,5927,
#Partially deleted in new
chr19	57614237	57619628	chr19:57614237-57619628	1	+	57619468	57619609	789624	2	266,217,	0,5174,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	57614250	57624723	chr19:57614250-57624723	3	+	57619468	57621403	789624	3	253,97,4564,	0,5161,5909,
#Partially deleted in new
chr19	57614255	57620318	chr19:57614255-57620318	0	+	57619468	57620318	789624	4	248,86,97,159,	0,4536,5156,5904,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	57625031	57626950	chr19:57625031-57626950	3	+	57625031	57625031	8553170	2	205,257,	0,1662,
#Partially deleted in new
chr19	57633166	57642779	chr19:57633166-57642779	1	+	57633346	57642181	789624	4	270,127,156,2076,	0,1462,6745,7537,
#Partially deleted in new
chr19	57633167	57642779	chr19:57633167-57642779	1	+	57633346	57642181	789624	3	269,127,2076,	0,1461,7536,
#Deleted in new
chr19	57633167	57634034	chr19:57633167-57634034	0	+	57633167	57633167	8553170	2	269,322,	0,545,
#Deleted in new
chr19	57633167	57634283	chr19:57633167-57634283	0	+	57633167	57633167	8553170	2	269,261,	0,855,
#Partially deleted in new
chr19	57633180	57642764	chr19:57633180-57642764	0	+	57633346	57633812	789624	6	256,120,39,127,156,2061,	0,605,842,1448,6731,7523,
#Partially deleted in new
chr19	57633185	57642279	chr19:57633185-57642279	1	+	57634721	57642181	789624	5	61,39,127,156,1576,	0,837,1443,6726,7518,
#Partially deleted in new
chr19	57633198	57642767	chr19:57633198-57642767	1	+	57634721	57642181	789624	3	48,127,2064,	0,1430,7505,
#Partially deleted in new
chr19	57633215	57642737	chr19:57633215-57642737	1	+	57633346	57642181	789624	5	221,39,127,156,2034,	0,807,1413,6696,7488,
#Partially deleted in new
chr19	57633215	57642764	chr19:57633215-57642764	0	+	57633346	57633760	789624	5	221,193,39,127,2061,	0,497,807,1413,7488,
#Deleted in new
chr19	57633224	57634079	chr19:57633224-57634079	0	+	57633224	57633224	8553170	3	212,193,57,	0,488,798,
#Partially deleted in new
chr19	57633227	57642768	chr19:57633227-57642768	3	+	57633346	57642181	789624	4	209,39,127,2065,	0,795,1401,7476,
#Deleted in new
chr19	57664279	57665039	chr19:57664279-57665039	7	+	57664279	57664279	16724991	1	760,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	57668934	57679152	chr19:57668934-57679152	3	+	57676145	57678905	789624	5	269,323,501,166,987,	0,1310,7106,8979,9231,
#Partially deleted in new
chr19	57670241	57679151	chr19:57670241-57679151	1	+	57676145	57678905	789624	4	326,501,166,986,	0,5799,7672,7924,
#Deleted in new
chr19	57681968	57688028	chr19:57681968-57688028	0	+	57685264	57688028	789624	3	154,124,1548,	0,3293,4512,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	57681978	57690654	chr19:57681978-57690654	3	+	57682163	57688288	789624	3	266,124,4174,	0,3283,4502,
#Deleted in new
chr19	57682006	57686835	chr19:57682006-57686835	0	+	57682006	57682006	8553170	2	238,355,	0,4474,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	57682034	57717301	chr19:57682034-57717301	1	+	57682211	57717186	789624	3	210,124,135,	0,3227,35132,
#Partially deleted in new
chr19	57682044	57753575	chr19:57682044-57753575	3	+	57682211	57753575	789624	3	200,127,285,	0,68740,71246,
#Partially deleted in new
chr19	57682044	57747072	chr19:57682044-57747072	0	+	57682044	57682044	8553170	2	200,221,	0,64807,
#Partially deleted in new
chr19	57697366	57709194	chr19:57697366-57709194	0	-	57701634	57708971	789624	5	475,158,1551,127,256,	0,3621,3871,7486,11572,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57697366	57709168	chr19:57697366-57709168	3	-	57701634	57708971	789624	4	3779,1551,127,230,	0,3871,7486,11572,
#Partially deleted in new
chr19	57719750	57727624	chr19:57719750-57727624	3	-	57720480	57727528	789624	4	1947,123,127,234,	0,2565,3463,7640,
#Partially deleted in new
chr19	57719750	57727613	chr19:57719750-57727613	0	-	57727204	57727528	789624	4	1947,123,127,706,	0,2565,3463,7157,
#Partially deleted in new
chr19	57720120	57727622	chr19:57720120-57727622	0	-	57722405	57727528	789624	3	1577,123,232,	0,2195,7270,
#Partially deleted in new
chr19	57721686	57727615	chr19:57721686-57727615	1	-	57722405	57727528	789624	2	752,225,	0,5704,
#Partially deleted in new
chr19	57722321	57727622	chr19:57722321-57727622	0	-	57722321	57722321	8553170	3	101,127,232,	0,892,5069,
#Partially deleted in new
chr19	57723264	57727614	chr19:57723264-57727614	0	-	57723264	57723264	8553170	3	76,118,224,	0,3643,4126,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	57746795	57758159	chr19:57746795-57758159	3	+	57747058	57754687	789624	3	296,127,4869,	0,3989,6495,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	57746821	57750845	chr19:57746821-57750845	0	+	57746821	57746821	8553170	3	270,175,61,	0,2335,3963,
#Partially deleted in new
chr19	57746840	57753444	chr19:57746840-57753444	1	+	57747058	57753290	789624	3	251,127,171,	0,3944,6433,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	57750803	57757309	chr19:57750803-57757309	0	+	57750803	57756879	789624	2	108,438,	0,6068,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	57754043	57757194	chr19:57754043-57757194	0	+	57754043	57754043	8553170	2	1648,323,	0,2828,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57769654	57780614	chr19:57769654-57780614	1	+	57776635	57779796	789624	4	224,50,127,1864,	0,5111,6888,9096,
#Partially deleted in new
chr19	57769660	57814658	chr19:57769660-57814658	1	+	57769842	57814568	789624	3	218,127,233,	0,20613,44765,
#Partially deleted in new
chr19	57769669	57780577	chr19:57769669-57780577	3	+	57769842	57779796	789624	3	209,127,1827,	0,6873,9081,
#Partially deleted in new
chr19	57769669	57819939	chr19:57769669-57819939	1	+	57769842	57819603	789624	2	209,372,	0,49898,
#Partially deleted in new
chr19	57769695	57780544	chr19:57769695-57780544	1	+	57769842	57779347	789624	2	183,1794,	0,9055,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	57803840	57813404	chr19:57803840-57813404	0	-	57803987	57813404	789624	2	224,111,	0,9453,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	57807081	57814913	chr19:57807081-57814913	3	-	57808039	57814743	789624	3	2022,127,203,	0,6212,7629,
#Partially deleted in new
chr19	57807908	57814913	chr19:57807908-57814913	0	-	57814593	57814743	789624	3	1195,127,381,	0,5385,6624,
#Partially deleted in new
chr19	57813058	57814913	chr19:57813058-57814913	0	-	57813058	57813058	8553170	2	362,203,	0,1652,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57819718	57856233	chr19:57819718-57856233	0	+	57856199	57856233	789624	4	227,56,127,130,	0,775,19304,36385,
#Partially deleted in new
chr19	57819725	57858911	chr19:57819725-57858911	0	+	57858697	57858911	789624	2	220,336,	0,38850,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57819725	57858941	chr19:57819725-57858941	0	+	57856199	57858941	789624	4	220,56,127,366,	0,768,36381,38850,
#Partially deleted in new
chr19	57819730	57858813	chr19:57819730-57858813	0	+	57819912	57858813	789624	3	215,127,238,	0,36376,38845,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57819740	57842119	chr19:57819740-57842119	0	+	57839136	57842119	789624	4	205,56,127,1282,	0,753,19282,21097,
#Partially deleted in new
chr19	57819805	57858911	chr19:57819805-57858911	3	+	57819912	57858911	789624	3	140,130,336,	0,36298,38770,
#Partially deleted in new
chr19	57826460	57826778	chr19:57826460-57826778	7	-	57826460	57826460	16724991	1	318,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57830294	57846238	chr19:57830294-57846238	1	+	57830528	57844342	789624	4	270,127,959,1983,	0,8728,10543,13961,
#Partially deleted in new
chr19	57830311	57858641	chr19:57830311-57858641	0	+	57830528	57856123	789624	4	253,127,130,66,	0,8711,25792,28264,
#Partially deleted in new
chr19	57830312	57842576	chr19:57830312-57842576	3	+	57830528	57842576	789624	3	252,127,1739,	0,8710,10525,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	57848730	57857289	chr19:57848730-57857289	0	-	57848730	57848730	8553170	2	1831,273,	0,8286,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	57849856	57865112	chr19:57849856-57865112	3	+	57850038	57860140	789624	3	215,130,6537,	0,6247,8719,
#Partially deleted in new
chr19	57849859	57860210	chr19:57849859-57860210	1	+	57850038	57860140	789624	3	212,127,1635,	0,6247,8716,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	57849859	57854108	chr19:57849859-57854108	0	+	57849859	57849859	8553170	2	212,333,	0,3916,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	57850314	57888920	chr19:57850314-57888920	1	-	57850469	57888802	789624	3	247,127,154,	0,26601,38452,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	57850678	57889019	chr19:57850678-57889019	1	-	57852344	57888802	789624	3	1710,127,253,	0,26237,38088,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	57852165	57888807	chr19:57852165-57888807	0	-	57868466	57888802	789624	6	69,51,169,122,127,41,	0,172,6649,16292,24750,36601,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	57855968	57864041	chr19:57855968-57864041	1	+	57856199	57860140	789624	2	265,5466,	0,2607,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	57858129	57888821	chr19:57858129-57888821	1	-	57858899	57888802	789624	2	854,55,	0,30637,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	57858143	57860639	chr19:57858143-57860639	0	-	57858143	57858143	8553170	1	2496,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	57861284	57862158	chr19:57861284-57862158	0	+	57861284	57861284	8553170	2	189,365,	0,509,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	57864757	57889037	chr19:57864757-57889037	0	-	57868573	57888802	789624	5	166,122,71,127,271,	0,3700,10398,12158,24009,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57864758	57888817	chr19:57864758-57888817	1	-	57868466	57888802	789624	4	161,122,127,51,	0,3699,12157,24008,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57864764	57888780	chr19:57864764-57888780	2	-	57864869	57888780	789624	4	155,93,127,14,	0,3722,12151,24002,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	57867037	57868172	chr19:57867037-57868172	3	-	57867037	57867037	8553170	2	357,322,	0,813,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	57867884	57868775	chr19:57867884-57868775	7	+	57867884	57867884	16724991	1	891,	0,
#Partially deleted in new
chr19	57867969	57868834	chr19:57867969-57868834	5	+	57867969	57867969	16724991	2	496,45,	0,820,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	57869382	57871659	chr19:57869382-57871659	0	-	57869382	57869382	8553170	1	2277,	0,
#Partially deleted in new
chr19	57872478	57889037	chr19:57872478-57889037	1	-	57872821	57888802	789624	3	2748,127,271,	0,4437,16288,
#Partially deleted in new
chr19	57872821	57889074	chr19:57872821-57889074	1	-	57872821	57888802	789624	7	301,342,168,168,592,127,308,	0,385,979,1231,1813,4094,15945,
#Partially deleted in new
chr19	57876474	57888969	chr19:57876474-57888969	1	-	57876889	57888802	789624	2	568,203,	0,12292,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	57876764	57916591	chr19:57876764-57916591	3	-	57888972	57912093	789624	6	278,242,59,127,101,213,	0,12002,24892,35295,38800,39614,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	57906845	57916576	chr19:57906845-57916576	3	-	57908549	57916411	789624	3	3269,130,198,	0,5214,9533,
#Partially deleted in new
chr19	57908479	57916591	chr19:57908479-57916591	1	-	57908549	57916411	789624	3	1635,127,213,	0,3580,7899,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57909976	57916592	chr19:57909976-57916592	0	-	57909976	57912093	789624	4	138,127,101,214,	0,2083,5588,6402,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57909994	57916610	chr19:57909994-57916610	0	-	57909994	57912093	789624	4	120,130,101,232,	0,2065,5570,6384,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57910084	57916577	chr19:57910084-57916577	0	-	57910084	57912093	789624	4	30,127,194,199,	0,1975,5253,6294,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57910103	57916609	chr19:57910103-57916609	0	-	57910103	57912093	789624	4	11,130,194,231,	0,1956,5234,6275,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	57921883	57935372	chr19:57921883-57935372	3	-	57926149	57933822	789624	6	746,98,2425,127,86,212,	0,1308,3739,8544,11933,13277,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	57921883	57933963	chr19:57921883-57933963	1	-	57926149	57933822	789624	5	746,98,2425,127,147,	0,1308,3739,8544,11933,
#Partially deleted in new
chr19	57922260	57935354	chr19:57922260-57935354	0	-	57922260	57922260	8553170	3	369,56,71,	0,12819,13023,
#Partially deleted in new
chr19	57922260	57925794	chr19:57922260-57925794	0	-	57922260	57922260	8553170	2	369,172,	0,3362,
#Partially deleted in new
chr19	57925769	57935383	chr19:57925769-57935383	1	-	57926149	57927925	789624	2	2278,223,	0,9391,
#Partially deleted in new
chr19	57926051	57933905	chr19:57926051-57933905	1	-	57926149	57933822	789624	3	1996,127,89,	0,4376,7765,
#Partially deleted in new
chr19	57927887	57935393	chr19:57927887-57935393	0	-	57927887	57933822	789624	5	160,130,86,105,59,	0,2540,5929,7143,7447,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57927904	57934237	chr19:57927904-57934237	0	-	57927904	57933822	789624	4	143,130,86,184,	0,2523,5912,6149,
#Partially deleted in new
chr19	57927977	57935380	chr19:57927977-57935380	0	-	57927977	57932495	789624	6	70,85,217,86,56,46,	0,2450,4452,5839,7102,7357,
#Deleted in new
chr19	57934814	57935374	chr19:57934814-57935374	0	-	57934814	57934814	8553170	2	321,40,	0,520,
#Partially deleted in new
chr19	57940832	57947671	chr19:57940832-57947671	3	-	57940923	57947474	789624	3	1815,127,230,	0,3101,6609,
#Partially deleted in new
chr19	57940923	57947675	chr19:57940923-57947675	1	-	57942509	57947474	789624	2	1724,234,	0,6518,
#Deleted in new
chr19	57953157	57953759	chr19:57953157-57953759	7	-	57953157	57953157	16724991	1	602,	0,
#Partially deleted in new
chr19	57958436	57974534	chr19:57958436-57974534	3	-	57958601	57974432	789624	6	281,161,103,42,105,223,	0,2954,8093,14026,15662,15875,
#Partially deleted in new
chr19	57977052	58003349	chr19:57977052-58003349	3	-	57978300	58001319	789624	7	3227,96,127,89,57,82,570,	0,11154,11542,22755,23630,24236,25727,
#Partially deleted in new
chr19	57978264	58002819	chr19:57978264-58002819	0	-	57988632	58001319	789624	6	2015,96,127,57,82,40,	0,9942,10330,22418,23024,24515,
#Partially deleted in new
chr19	57979153	58002827	chr19:57979153-58002827	0	-	57979153	58001319	789624	7	1126,96,127,89,57,82,432,	0,9053,9441,20654,21529,22135,23242,
#Partially deleted in new
chr19	57988675	58002782	chr19:57988675-58002782	0	-	57988675	57988675	8553170	4	46,57,82,387,	0,12007,12613,13720,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	57997395	58002819	chr19:57997395-58002819	1	-	57999774	58001319	789624	4	2501,57,82,40,	0,3287,3893,5384,
#Partially deleted in new
chr19	57999263	58002819	chr19:57999263-58002819	1	-	57999774	58001319	789624	4	633,57,82,424,	0,1419,2025,3132,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	58000223	58002817	chr19:58000223-58002817	1	-	58000503	58001319	789624	3	516,82,38,	0,1065,2556,
#Deleted in new
chr19	58000570	58002795	chr19:58000570-58002795	0	-	58000570	58001319	789624	3	169,82,400,	0,718,1825,
#Deleted in new
chr19	58001156	58002746	chr19:58001156-58002746	0	-	58001156	58001156	8553170	2	214,351,	0,1239,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	58002060	58011232	chr19:58002060-58011232	3	+	58002060	58002060	8553170	3	986,126,5326,	0,1150,3846,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	58002889	58006409	chr19:58002889-58006409	0	+	58002889	58002889	8553170	3	157,126,2027,	0,321,1493,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	58002893	58007206	chr19:58002893-58007206	1	+	58002893	58002893	789624	4	153,126,318,1300,	0,317,1489,3013,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	58002901	58004161	chr19:58002901-58004161	0	+	58002901	58002901	8553170	2	145,951,	0,309,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	58002907	58009852	chr19:58002907-58009852	1	+	58002907	58002907	8553170	4	139,126,89,522,	0,303,2999,6423,
#Partially deleted in new
chr19	58002920	58009930	chr19:58002920-58009930	0	+	58002920	58002920	8553170	3	126,126,600,	0,290,6410,
#Partially deleted in new
chr19	58012588	58025926	chr19:58012588-58025926	7	-	58012588	58012588	16724991	3	833,153,66,	0,7453,13272,
#Partially deleted in new
chr19	58034031	58038444	chr19:58034031-58038444	1	+	58037836	58038373	789624	4	130,63,42,717,	0,1408,1938,3696,
#Partially deleted in new
chr19	58034065	58054631	chr19:58034065-58054631	3	+	58037836	58054051	789624	6	96,42,479,95,139,1203,	0,1904,3662,6384,18424,19363,
#Partially deleted in new
chr19	58034105	58038442	chr19:58034105-58038442	1	+	58037836	58038373	789624	3	56,42,715,	0,1864,3622,
#Deleted in new
chr19	58044591	58046769	chr19:58044591-58046769	7	+	58044591	58044591	16724991	1	2178,	0,
#Partially deleted in new
chr19	58049045	58049346	chr19:58049045-58049346	7	-	58049045	58049045	16724991	1	301,	0,
#Partially deleted in new
chr19	58059238	58069405	chr19:58059238-58069405	1	+	58059241	58068461	789624	5	72,127,96,827,998,	0,2341,4207,7502,9169,
#Partially deleted in new
chr19	58059238	58069755	chr19:58059238-58069755	1	+	58059241	58068461	789624	4	72,127,96,3051,	0,2341,4207,7466,
#Partially deleted in new
chr19	58059243	58069408	chr19:58059243-58069408	1	+	58060002	58068461	789624	5	67,67,127,96,2668,	0,725,2336,4202,7497,
#Partially deleted in new
chr19	58059268	58068630	chr19:58059268-58068630	3	+	58060002	58068461	789624	5	42,62,127,96,1926,	0,705,2311,4177,7436,
#Partially deleted in new
chr19	58059279	58069405	chr19:58059279-58069405	1	+	58061672	58068461	789624	5	31,430,127,96,2665,	0,689,2300,4166,7461,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	58059733	58086310	chr19:58059733-58086310	0	+	58060002	58081754	789624	4	302,127,316,2091,	0,1846,21959,24486,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	58069969	58070288	chr19:58069969-58070288	3	+	58069969	58069969	8553170	1	319,	0,
#Partially deleted in new
chr19	58083837	58089961	chr19:58083837-58089961	0	-	58084684	58089961	789624	6	1539,93,103,89,150,97,	0,2336,3068,3478,4850,6027,
#Partially deleted in new
chr19	58083838	58098210	chr19:58083838-58098210	3	-	58084684	58090267	789624	7	1541,93,103,89,150,522,281,	0,2335,3067,3477,4849,6026,14091,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	58083842	58090598	chr19:58083842-58090598	0	-	58083842	58083842	8553170	2	4995,734,	0,6022,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	58083858	58088027	chr19:58083858-58088027	0	-	58083858	58083858	8553170	4	1521,93,103,712,	0,2315,3047,3457,
#Partially deleted in new
chr19	58084336	58098363	chr19:58084336-58098363	1	-	58084684	58090267	789624	7	1043,93,103,89,150,522,190,	0,1837,2569,2979,4351,5528,13837,
#Partially deleted in new
chr19	58084437	58098228	chr19:58084437-58098228	1	-	58084684	58088835	789624	6	939,93,103,89,150,114,	0,1736,2468,2878,4250,13677,
#Partially deleted in new
chr19	58084481	58118426	chr19:58084481-58118426	1	-	58084684	58118396	789624	7	898,93,103,89,150,522,79,	0,1692,2424,2834,4206,5383,33866,
#Deleted in new
chr19	58086173	58087377	chr19:58086173-58087377	0	-	58086173	58087377	789624	2	93,62,	0,1142,
#Deleted in new
chr19	58086579	58087453	chr19:58086579-58087453	0	-	58086579	58086579	8553170	2	429,138,	0,736,
#Partially deleted in new
chr19	58087092	58098231	chr19:58087092-58098231	0	-	58087092	58087092	8553170	4	312,150,522,58,	0,1595,2772,11081,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	58087636	58098210	chr19:58087636-58098210	0	-	58087636	58087636	8553170	3	1201,522,281,	0,2228,10293,
#Partially deleted in new
chr19	58088684	58098214	chr19:58088684-58098214	0	-	58088684	58090267	789624	4	153,522,171,100,	0,1180,4543,9430,
#Partially deleted in new
chr19	58088687	58098203	chr19:58088687-58098203	0	-	58088687	58090267	789624	3	150,522,89,	0,1177,9427,
#Partially deleted in new
chr19	58090175	58118397	chr19:58090175-58118397	0	-	58090175	58118396	789624	2	211,131,	0,28091,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	58107615	58118427	chr19:58107615-58118427	1	-	58109232	58118396	789624	2	1688,80,	0,10732,
#Partially deleted in new
chr19	58108801	58118366	chr19:58108801-58118366	0	-	58108801	58108801	8553170	2	502,48,	0,9517,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	58126251	58150787	chr19:58126251-58150787	3	-	58127877	58129503	789624	5	3260,435,105,94,36,	0,5990,16305,16853,24500,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	58126327	58150778	chr19:58126327-58150778	1	-	58127877	58129503	789624	4	3184,105,94,27,	0,16229,16777,24424,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	58126329	58142664	chr19:58126329-58142664	1	-	58127877	58129503	789624	2	3182,108,	0,16227,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	58126334	58155110	chr19:58126334-58155110	0	-	58127877	58129503	789624	5	429,2087,105,94,376,	0,1090,16222,16770,28400,
#Partially deleted in new
chr19	58129375	58155067	chr19:58129375-58155067	0	-	58129375	58129503	789624	2	136,333,	0,25359,
#Deleted in new
chr19	58136712	58137054	chr19:58136712-58137054	7	+	58136712	58136712	16724991	1	342,	0,
#Deleted in new
chr19	58166165	58167145	chr19:58166165-58167145	7	+	58166165	58166165	16724991	1	980,	0,
#Partially deleted in new
chr19	58183028	58213562	chr19:58183028-58213562	1	+	58206778	58213143	789624	5	414,483,113,127,1402,	0,23691,26932,28531,29132,
#Partially deleted in new
chr19	58183062	58210442	chr19:58183062-58210442	0	+	58183062	58183062	8553170	6	380,78,127,96,483,482,	0,858,2649,3884,23657,26898,
#Partially deleted in new
chr19	58183071	58187042	chr19:58183071-58187042	0	+	58183071	58183071	8553170	2	371,96,	0,3875,
#Partially deleted in new
chr19	58183086	58213554	chr19:58183086-58213554	1	+	58183965	58213143	789624	7	356,78,127,483,113,127,1394,	0,834,2625,23633,26874,28473,29074,
#Partially deleted in new
chr19	58183108	58210709	chr19:58183108-58210709	0	+	58183108	58183108	8553170	3	334,483,749,	0,23611,26852,
#Partially deleted in new
chr19	58183309	58213541	chr19:58183309-58213541	3	+	58183965	58213143	789624	8	133,78,127,96,483,113,127,1381,	0,611,2402,3637,23410,26651,28250,28851,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	58183393	58186176	chr19:58183393-58186176	0	+	58183393	58183393	8553170	2	1453,703,	0,2080,
#Partially deleted in new
chr19	58183399	58210392	chr19:58183399-58210392	0	+	58183399	58183399	8553170	6	43,78,127,96,483,432,	0,521,2312,3547,23320,26561,
#Partially deleted in new
chr19	58183426	58213552	chr19:58183426-58213552	1	+	58185804	58213143	789624	8	16,78,142,96,483,113,127,1392,	0,494,2270,3520,23293,26534,28133,28734,
#Partially deleted in new
chr19	58183453	58213552	chr19:58183453-58213552	1	+	58183965	58213143	789624	8	143,78,127,96,483,113,127,1392,	0,467,2258,3493,23266,26507,28106,28707,
#Partially deleted in new
chr19	58183493	58187023	chr19:58183493-58187023	0	+	58183965	58187023	789624	3	505,127,77,	0,2218,3453,
#Partially deleted in new
chr19	58183920	58207089	chr19:58183920-58207089	0	+	58206778	58207089	789624	3	78,96,370,	0,3026,22799,
#Partially deleted in new
chr19	58186946	58202468	chr19:58186946-58202468	0	+	58186946	58186946	8553170	2	96,242,	0,15280,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	58208097	58213423	chr19:58208097-58213423	0	+	58208097	58208097	8553170	2	3589,1263,	0,4063,
#Deleted in new
chr19	58216179	58216561	chr19:58216179-58216561	7	+	58216179	58216179	16724991	1	382,	0,
#Deleted in new
chr19	58224505	58225469	chr19:58224505-58225469	7	+	58224505	58224505	16724991	1	964,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	58228593	58263644	chr19:58228593-58263644	1	+	58244023	58260869	789624	7	353,103,69,92,127,49,2794,	0,874,1800,15371,17707,18152,32257,
#Partially deleted in new
chr19	58228913	58260965	chr19:58228913-58260965	1	+	58244023	58260869	789624	7	33,103,69,92,127,49,115,	0,554,1480,15051,17387,17832,31937,
#Deleted in new
chr19	58228913	58230296	chr19:58228913-58230296	0	+	58228913	58228913	8553170	3	33,103,344,	0,554,1039,
#Deleted in new
chr19	58228913	58229986	chr19:58228913-58229986	0	+	58228913	58228913	8553170	2	33,519,	0,554,
#Partially deleted in new
chr19	58228918	58246816	chr19:58228918-58246816	0	+	58228918	58228918	8553170	7	28,103,69,92,83,127,71,	0,549,1475,15046,16868,17382,17827,
#Deleted in new
chr19	58228940	58230072	chr19:58228940-58230072	0	+	58228940	58228940	8553170	3	316,103,120,	0,527,1012,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	58228974	58263644	chr19:58228974-58263644	1	+	58244023	58260869	789624	7	282,103,69,92,127,49,2794,	0,493,1419,14990,17326,17771,31876,
#Partially deleted in new
chr19	58229464	58263190	chr19:58229464-58263190	1	+	58244023	58262754	789624	6	106,69,92,127,84,2340,	0,929,14500,16836,17246,31386,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	58229464	58263479	chr19:58229464-58263479	0	+	58244023	58259293	789624	7	106,104,92,127,49,516,3115,	0,929,14500,16836,17281,29813,30900,
#Partially deleted in new
chr19	58229464	58277247	chr19:58229464-58277247	3	+	58244023	58277232	789624	6	106,69,92,127,84,65,	0,929,14500,16836,17246,47718,
#Partially deleted in new
chr19	58229464	58261252	chr19:58229464-58261252	0	+	58229464	58229464	8553170	4	66,53,49,402,	0,16910,17281,31386,
#Partially deleted in new
chr19	58229464	58262956	chr19:58229464-58262956	1	+	58261032	58262754	789624	4	66,53,49,2106,	0,16910,17281,31386,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	58229464	58263205	chr19:58229464-58263205	1	+	58244023	58262754	789624	5	106,104,92,127,2355,	0,929,14500,16836,31386,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	58229464	58263293	chr19:58229464-58263293	1	+	58244023	58262754	789624	5	106,69,92,127,2443,	0,929,14500,16836,31386,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	58229464	58247611	chr19:58229464-58247611	0	+	58229464	58229464	8553170	4	66,53,84,330,	0,16910,17246,17817,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr19	58229464	58286807	chr19:58229464-58286807	0	+	58244023	58246737	789624	5	106,92,90,84,1091,	0,14500,16836,17246,56252,
#Partially deleted in new
chr19	58229467	58277495	chr19:58229467-58277495	1	+	58244023	58277251	789624	7	103,69,92,127,84,107,313,	0,926,14497,16833,17243,46855,47715,
#Partially deleted in new
chr19	58229470	58231820	chr19:58229470-58231820	0	+	58229470	58229470	8553170	3	100,69,49,	0,923,2301,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	58243962	58264092	chr19:58243962-58264092	1	+	58244023	58262754	789624	4	94,127,84,3242,	0,2338,2748,16888,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	58257269	58278808	chr19:58257269-58278808	3	-	58257269	58257269	8553170	2	2422,286,	0,21253,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	58266634	58267685	chr19:58266634-58267685	3	+	58266634	58266634	8553170	2	478,72,	0,979,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	58278950	58302805	chr19:58278950-58302805	3	+	58279081	58295536	789624	4	197,127,96,8708,	0,6766,7159,15147,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	58305376	58306634	chr19:58305376-58306634	0	+	58305376	58305376	8553170	2	69,547,	0,711,
#Deleted in new
chr19	58319276	58320489	chr19:58319276-58320489	7	+	58319276	58319276	16724991	1	1213,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	58327018	58342332	chr19:58327018-58342332	3	+	58334802	58339326	789624	3	96,454,4079,	0,7733,11235,
#Deleted in new
chr19	58334687	58334751	chr19:58334687-58334751	3	+	58334687	58334687	5263520	1	64,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	58345177	58347634	chr19:58345177-58347634	0	-	58345177	58345177	8553170	2	1852,282,	0,2175,
#Partially deleted in new
chr19	58346849	58353499	chr19:58346849-58353499	3	-	58347021	58353437	789624	8	180,288,282,297,273,270,36,96,	0,503,3520,4541,5433,6078,6442,6554,
#Partially deleted in new
chr19	58346853	58356225	chr19:58346853-58356225	0	-	58346853	58346853	8553170	8	176,288,282,297,273,270,36,143,	0,499,3516,4537,5429,6074,6438,9229,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr19	58346857	58353491	chr19:58346857-58353491	0	-	58346857	58346857	8553170	7	172,288,282,1165,270,36,88,	0,495,3512,4533,6070,6434,6546,
#Deleted in new
chr19	58346859	58347657	chr19:58346859-58347657	0	-	58346859	58346859	8553170	2	170,305,	0,493,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	58347750	58355183	chr19:58347750-58355183	3	+	58347750	58347750	8553170	3	94,154,1470,	0,5570,5963,
#Partially deleted in new
chr19	58347751	58354425	chr19:58347751-58354425	0	+	58347751	58347751	8553170	3	93,154,712,	0,5569,5962,
#Partially deleted in new
chr19	58347752	58354502	chr19:58347752-58354502	0	+	58347752	58347752	8553170	3	92,96,789,	0,5626,5961,
#Partially deleted in new
chr19	58347752	58354039	chr19:58347752-58354039	0	+	58347752	58347752	8553170	3	92,141,326,	0,5568,5961,
#Partially deleted in new
chr19	58347786	58354724	chr19:58347786-58354724	0	+	58347786	58347786	8553170	4	58,154,144,356,	0,5534,5927,6582,
#Partially deleted in new
chr19	58347788	58354713	chr19:58347788-58354713	0	+	58347788	58347788	8553170	2	56,1000,	0,5925,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr19	58348465	58362751	chr19:58348465-58362751	3	-	58348465	58348465	8553170	11	660,1087,297,273,270,36,65,335,97,127,75,	0,1099,2925,3817,4462,4826,9119,9486,10023,10731,14211,
#Partially deleted in new
chr19	58350593	58353129	chr19:58350593-58353129	0	-	58350593	58353129	789624	5	58,297,87,273,202,	0,797,1504,1689,2334,
#Deleted in new
chr19	58350794	58351720	chr19:58350794-58351720	3	+	58350794	58350794	8553170	1	926,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	58351969	58355183	chr19:58351969-58355183	1	+	58351969	58351969	5263520	4	1075,96,144,815,	0,1409,1744,2399,
#Partially deleted in new
chr19	58353020	58356083	chr19:58353020-58356083	0	-	58353020	58353020	8553170	3	177,36,223,	0,271,2840,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	58354356	58362754	chr19:58354356-58362754	3	-	58356138	58357635	789624	3	3293,97,78,	0,4132,8320,
#Partially deleted in new
chr19	58355560	58362848	chr19:58355560-58362848	1	-	58356138	58357635	789624	2	2089,172,	0,7116,
#Partially deleted in new
chr19	58357438	58362825	chr19:58357438-58362825	0	-	58357438	58358066	789624	4	211,335,97,149,	0,513,1050,5238,
#Deleted in new
chr19	58357998	58359603	chr19:58357998-58359603	3	+	58357998	58357998	8553170	2	240,914,	0,691,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	58362584	58366591	chr19:58362584-58366591	3	+	58362584	58362584	789624	3	168,64,558,	0,1951,3449,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	58363437	58363562	chr19:58363437-58363562	7	+	58363437	58363437	16724991	1	125,	0,
#Partially deleted in new
chr19	58367617	58381022	chr19:58367617-58381022	1	-	58367736	58369332	789624	3	1744,212,82,	0,2099,13323,
#Partially deleted in new
chr19	58367622	58381060	chr19:58367622-58381060	3	-	58367736	58369332	789624	3	1739,110,120,	0,2196,13318,
#Partially deleted in new
chr19	58386399	58394806	chr19:58386399-58394806	3	+	58388137	58394750	0	7	223,308,109,210,129,99,125,	0,632,1737,6576,6959,8097,8282,
#Partially deleted in new
chr19	58386506	58394736	chr19:58386506-58394736	0	+	58388137	58394736	789624	6	116,109,210,129,99,55,	0,1630,6469,6852,7990,8175,
#Deleted in new
chr19	58386769	58386858	chr19:58386769-58386858	3	-	58386769	58386769	5263520	1	89,	0,
#Partially deleted in new
chr19	58387263	58394804	chr19:58387263-58394804	1	+	58388137	58394750	789624	5	76,109,129,99,123,	0,873,6095,7233,7418,
#Partially deleted in new
chr19	58387268	58394803	chr19:58387268-58394803	1	+	58388137	58394750	0	6	71,109,210,129,99,122,	0,868,5707,6090,7228,7413,
#Partially deleted in new
chr19	58387268	58394800	chr19:58387268-58394800	1	+	58388137	58394750	789624	7	71,109,63,210,129,99,119,	0,868,1149,5707,6090,7228,7413,
#Deleted in new
chr19	58387274	58388594	chr19:58387274-58388594	0	+	58387274	58387274	8553170	2	65,458,	0,862,
#Partially deleted in new
chr19	58387283	58393953	chr19:58387283-58393953	0	+	58387283	58387283	8553170	4	56,109,210,595,	0,853,5692,6075,
#Partially deleted in new
chr19	58387288	58394806	chr19:58387288-58394806	1	+	58388137	58394750	0	5	957,210,129,99,125,	0,5687,6070,7208,7393,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	58393055	58394802	chr19:58393055-58394802	0	+	58393055	58393055	8553170	1	1747,	0,
#Deleted in new
chr19	58396089	58397079	chr19:58396089-58397079	3	+	58396089	58397079	789624	1	990,	0,
#Deleted in new
chr19	58400220	58400679	chr19:58400220-58400679	3	+	58400220	58400220	789624	1	459,	0,
#Partially deleted in new
chr19	58401503	58417119	chr19:58401503-58417119	0	+	58401503	58401503	8553170	3	159,123,309,	0,14020,15307,
#Partially deleted in new
chr19	58401570	58417011	chr19:58401570-58417011	0	+	58401570	58401570	8553170	4	92,123,148,201,	0,13953,14222,15240,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	58404237	58407296	chr19:58404237-58407296	3	-	58404237	58404237	8553170	1	3059,	0,
#Deleted in new
chr19	58406395	58407177	chr19:58406395-58407177	1	-	58406395	58406395	8553170	2	375,48,	0,734,
#Deleted in new
chr19	58406558	58408484	chr19:58406558-58408484	1	-	58406558	58406558	8553170	2	212,358,	0,1568,
#Partially deleted in new
chr19	58408624	58418327	chr19:58408624-58418327	3	+	58409147	58417784	789624	4	541,151,123,1517,	0,1316,6899,8186,
#Partially deleted in new
chr19	58408673	58415552	chr19:58408673-58415552	0	+	58409147	58415552	789624	2	533,29,	0,6850,
#Partially deleted in new
chr19	58408687	58418310	chr19:58408687-58418310	1	+	58410057	58417784	789624	4	478,86,123,1500,	0,1318,6836,8123,
#Partially deleted in new
chr19	58408688	58415621	chr19:58408688-58415621	1	+	58409147	58415604	789624	2	477,98,	0,6835,
#Partially deleted in new
chr19	58408751	58418327	chr19:58408751-58418327	1	+	58410057	58415917	789624	5	414,86,123,148,1517,	0,1254,6772,7041,8059,
#Partially deleted in new
chr19	58408776	58417091	chr19:58408776-58417091	1	+	58409147	58416858	789624	5	389,127,123,122,281,	0,1188,6747,7042,8034,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	58415614	58418323	chr19:58415614-58418323	0	+	58415614	58415614	8553170	1	2709,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	58418559	58419310	chr19:58418559-58419310	3	+	58418559	58418559	8553170	2	422,73,	0,678,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	58428631	58431148	chr19:58428631-58431148	3	-	58428631	58428631	8553170	1	2517,	0,
#Partially deleted in new
chr19	58432813	58440222	chr19:58432813-58440222	3	-	58433322	58439821	789624	3	2398,169,464,	0,4233,6945,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	58433228	58435584	chr19:58433228-58435584	0	-	58433228	58433228	8553170	1	2356,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	58440447	58445849	chr19:58440447-58445849	3	+	58440447	58440447	8553170	1	5402,	0,
#Partially deleted in new
chr19	58451603	58457833	chr19:58451603-58457833	3	+	58453701	58456579	789624	4	101,127,117,2651,	0,2092,2624,3579,
#Partially deleted in new
chr19	58451610	58457132	chr19:58451610-58457132	1	+	58453701	58456579	789624	5	94,80,127,117,1950,	0,1576,2085,2617,3572,
#Partially deleted in new
chr19	58451618	58455359	chr19:58451618-58455359	0	+	58453701	58455359	789624	4	125,127,117,177,	0,2077,2609,3564,
#Partially deleted in new
chr19	58451624	58454344	chr19:58451624-58454344	0	+	58453701	58454344	789624	4	80,655,127,117,	0,503,2071,2603,
#Partially deleted in new
chr19	58451624	58455387	chr19:58451624-58455387	0	+	58453701	58455387	789624	4	129,127,117,205,	0,2071,2603,3558,
#Partially deleted in new
chr19	58451646	58454606	chr19:58451646-58454606	1	+	58453701	58454499	789624	3	58,127,379,	0,2049,2581,
#Partially deleted in new
chr19	58467044	58471466	chr19:58467044-58471466	1	+	58469185	58471466	789624	5	139,127,117,596,27,	0,2135,2683,3686,4395,
#Partially deleted in new
chr19	58467055	58475436	chr19:58467055-58475436	3	+	58469185	58472154	789624	4	703,127,117,4706,	0,2124,2672,3675,
#Partially deleted in new
chr19	58467095	58473398	chr19:58467095-58473398	1	+	58469185	58472154	789624	4	88,127,117,2668,	0,2084,2632,3635,
#Deleted in new
chr19	58470917	58473414	chr19:58470917-58473414	0	+	58470917	58472154	789624	2	1245,1085,	0,1412,
#Partially deleted in new
chr19	58474016	58481228	chr19:58474016-58481228	1	+	58477218	58480726	789624	7	2180,382,190,95,85,90,900,	0,3162,3620,4070,5626,5913,6312,
#Deleted in new
chr19	58475354	58475763	chr19:58475354-58475763	3	-	58475354	58475354	8553170	1	409,	0,
#Deleted in new
chr19	58476145	58478124	chr19:58476145-58478124	0	+	58476145	58476145	8553170	2	51,946,	0,1033,
#Deleted in new
chr19	58476155	58477717	chr19:58476155-58477717	0	+	58477218	58477717	789624	4	41,65,382,81,	0,284,1023,1481,
#Partially deleted in new
chr19	58476163	58481230	chr19:58476163-58481230	3	+	58477218	58480726	789624	7	341,382,190,95,85,90,1055,	0,1015,1473,1923,3479,3766,4012,
#Partially deleted in new
chr19	58476427	58481230	chr19:58476427-58481230	1	+	58477218	58480469	789624	6	77,382,190,95,90,1055,	0,751,1209,1659,3502,3748,
#Partially deleted in new
chr19	58476427	58481224	chr19:58476427-58481224	1	+	58477218	58480726	789624	6	77,382,190,95,91,1049,	0,751,1209,1659,3501,3748,
#Partially deleted in new
chr19	58476442	58481224	chr19:58476442-58481224	1	+	58477218	58480726	789624	8	62,382,190,95,85,90,444,521,	0,736,1194,1644,3200,3487,3733,4261,
#Partially deleted in new
chr19	58476449	58481230	chr19:58476449-58481230	0	+	58476449	58476449	8553170	6	55,382,190,95,377,1055,	0,729,1187,1637,3193,3726,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	58479511	58499263	chr19:58479511-58499263	0	-	58498514	58498895	789624	6	1294,124,115,198,131,141,	0,1552,4020,18982,19273,19611,
#Deleted in new
chr19	58483748	58483843	chr19:58483748-58483843	3	-	58483748	58483748	8553170	1	95,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	58490796	58491075	chr19:58490796-58491075	3	+	58490796	58490796	8553170	1	279,	0,
#Deleted in new
chr19	58498332	58499275	chr19:58498332-58499275	1	-	58498514	58498895	789624	3	359,131,153,	0,452,790,
#Partially deleted in new
chr19	58498336	58512065	chr19:58498336-58512065	3	-	58498514	58511955	789624	10	355,131,98,199,91,195,125,159,210,798,	0,448,786,1155,2002,2175,2949,11510,12384,12931,
#Deleted in new
chr19	58498336	58499241	chr19:58498336-58499241	0	-	58498336	58498336	8553170	2	355,119,	0,786,
#Partially deleted in new
chr19	58498385	58511992	chr19:58498385-58511992	1	-	58498514	58511955	789624	10	306,131,98,199,91,195,125,159,210,473,	0,399,737,1106,1953,2126,2900,11461,12335,13134,
#Deleted in new
chr19	58498474	58499142	chr19:58498474-58499142	0	-	58498474	58498474	8553170	2	217,358,	0,310,
#Deleted in new
chr19	58500504	58501137	chr19:58500504-58501137	3	+	58500504	58500504	8553170	1	633,	0,
#Partially deleted in new
chr19	58500593	58510172	chr19:58500593-58510172	0	-	58500593	58500593	8553170	3	113,125,326,	0,692,9253,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	58507381	58512413	chr19:58507381-58512413	0	-	58507381	58507381	8553170	1	5032,	0,
#Partially deleted in new
chr19	58513529	58519554	chr19:58513529-58519554	1	-	58514053	58517673	789624	3	781,1279,292,	0,2865,5733,
#Partially deleted in new
chr19	58513529	58520222	chr19:58513529-58520222	3	-	58514053	58517673	789624	3	781,1279,481,	0,2865,6212,
#Partially deleted in new
chr19	58513565	58519751	chr19:58513565-58519751	1	-	58514053	58517673	789624	3	745,1279,135,	0,2829,6051,
#Partially deleted in new
chr19	58517308	58538911	chr19:58517308-58538911	0	-	58517308	58517673	789624	2	365,211,	0,21392,
#Deleted in new
chr19	58517622	58519559	chr19:58517622-58519559	0	-	58517622	58517673	789624	2	51,541,	0,1396,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr19	58543298	58543578	chr19:58543298-58543578	3	-	58543298	58543298	8553170	1	280,	0,
#Deleted in new
chr19	58544090	58547626	chr19:58544090-58547626	0	+	58544135	58547626	789624	5	121,113,133,136,30,	0,1334,1673,3285,3506,
#Deleted in new
chr19	58544456	58547888	chr19:58544456-58547888	0	+	58545486	58547888	789624	7	105,160,113,133,136,117,97,	0,481,968,1307,2919,3140,3335,
#Deleted in new
chr19	58544468	58550716	chr19:58544468-58550716	3	+	58544757	58550553	0	17	629,113,133,136,117,115,147,115,107,37,49,253,320,124,87,138,340,	0,956,1295,2907,3128,3323,3565,3825,4017,4271,4393,4519,4862,5268,5480,5678,5908,
#Deleted in new
chr19	58544472	58550715	chr19:58544472-58550715	1	+	58544757	58550553	0	15	625,136,117,115,147,115,107,37,49,253,320,124,87,138,339,	0,2903,3124,3319,3561,3821,4013,4267,4389,4515,4858,5264,5476,5674,5904,
#Deleted in new
chr19	58545166	58545896	chr19:58545166-58545896	0	+	58545486	58545896	789624	2	371,133,	0,597,
#Deleted in new
chr19	58547134	58547906	chr19:58547134-58547906	0	+	58547134	58547134	8553170	3	377,117,115,	0,462,657,
#Deleted in new
chr19	58547139	58548172	chr19:58547139-58548172	0	+	58547139	58547139	8553170	4	372,117,105,139,	0,457,662,894,
#Deleted in new
chr19	58547558	58548530	chr19:58547558-58548530	0	+	58547558	58547558	8553170	5	155,115,147,115,45,	0,233,475,735,927,
#Deleted in new
chr19	58547690	58549224	chr19:58547690-58549224	0	+	58547690	58547690	8553170	7	23,115,147,115,107,171,237,	0,101,343,603,795,1049,1297,
#Deleted in new
chr19	58547761	58549089	chr19:58547761-58549089	0	+	58547761	58547761	8553170	7	145,147,115,107,37,49,102,	0,272,532,724,978,1100,1226,
#Deleted in new
chr19	58548293	58550722	chr19:58548293-58550722	0	+	58548293	58550553	789624	10	115,107,37,25,253,320,124,87,138,346,	0,192,446,592,694,1037,1443,1655,1853,2083,
#Deleted in new
chr19	58548868	58549444	chr19:58548868-58549444	0	+	58548868	58548868	8553170	2	372,114,	0,462,
#Deleted in new
chr19	58549449	58550403	chr19:58549449-58550403	0	+	58549449	58549449	8553170	4	201,299,138,27,	0,287,697,927,
#Deleted in new
chr19	58549555	58550067	chr19:58549555-58550067	0	+	58549555	58549555	8553170	3	95,124,119,	0,181,393,
#Deleted in new
chr19	58549644	58550649	chr19:58549644-58550649	0	+	58549644	58549644	8553170	4	216,87,138,273,	0,304,502,732,
#Deleted in new
chr19	58550284	58550376	chr19:58550284-58550376	3	+	58550284	58550284	5263520	1	92,	0,
#Partially deleted in new
chr19	58551565	58555124	chr19:58551565-58555124	3	-	58551648	58554212	789624	6	211,62,131,180,192,137,	0,340,489,693,2479,3422,
#Partially deleted in new
chr19	58551565	58554097	chr19:58551565-58554097	0	-	58551648	58554097	789624	4	402,131,180,53,	0,489,693,2479,
#Partially deleted in new
chr19	58551565	58554638	chr19:58551565-58554638	1	-	58551648	58554212	789624	5	211,62,131,180,594,	0,340,489,693,2479,
#Partially deleted in new
chr19	58551565	58554973	chr19:58551565-58554973	1	-	58551648	58554212	789624	6	211,62,131,180,192,109,	0,340,489,693,2479,3299,
#Partially deleted in new
chr19	58552054	58554960	chr19:58552054-58554960	0	-	58552054	58554212	789624	4	131,180,192,184,	0,204,1990,2722,
#Partially deleted in new
chr19	58552097	58554993	chr19:58552097-58554993	0	-	58552097	58552097	8553170	3	341,192,129,	0,1947,2767,
#Deleted in new
chr19	58553747	58555090	chr19:58553747-58555090	0	-	58553747	58553747	8553170	2	489,103,	0,1240,
#Deleted in new
chr19	58554045	58554990	chr19:58554045-58554990	0	-	58554045	58554212	789624	2	191,318,	0,627,
#Deleted in new
chr19	58555711	58558960	chr19:58555711-58558960	3	-	58556088	58558381	0	6	518,64,104,39,95,688,	0,604,975,1180,1351,2561,
#Deleted in new
chr19	58556140	58558954	chr19:58556140-58558954	0	-	58556140	58556742	789624	7	89,64,104,39,95,82,261,	0,175,546,751,922,2132,2553,
#Deleted in new
chr19	58556200	58557089	chr19:58556200-58557089	0	-	58556204	58557089	789624	4	179,104,39,27,	0,486,691,862,
#Deleted in new
chr19	58556581	58557129	chr19:58556581-58557129	0	-	58556581	58556581	8553170	2	209,238,	0,310,
#Deleted in new
chr19	58556593	58557149	chr19:58556593-58557149	0	-	58556593	58556593	8553170	3	197,39,87,	0,298,469,
#Partially deleted in new
chr19	58559128	58570584	chr19:58559128-58570584	0	+	58559128	58559128	8553170	3	281,83,201,	0,9784,11255,
#Partially deleted in new
chr19	58559185	58571029	chr19:58559185-58571029	0	+	58559185	58559185	8553170	4	224,83,74,178,	0,9727,11198,11666,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr19	58559224	58574797	chr19:58559224-58574797	3	+	58559224	58559224	789624	6	185,83,74,98,246,1881,	0,9688,11159,12633,13353,13692,
#Deleted in new
chr19	58561930	58564613	chr19:58561930-58564613	0	-	58561930	58561930	8553170	1	2683,	0,
#Partially deleted in new
chr19	58561931	58573298	chr19:58561931-58573298	1	-	58563159	58571389	0	6	1329,121,71,184,436,244,	0,7345,7584,8412,9062,11123,
#Partially deleted in new
chr19	58561932	58573575	chr19:58561932-58573575	1	-	58562071	58571389	0	6	1572,121,71,184,436,521,	0,7344,7583,8411,9061,11122,
#Partially deleted in new
chr19	58561932	58573575	chr19:58561932-58573575	3	-	58562071	58571389	0	6	1572,121,71,184,436,203,	0,7344,7583,8411,9061,11440,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	58568166	58571545	chr19:58568166-58571545	0	-	58568166	58568166	8553170	2	1231,2030,	0,1349,
#Partially deleted in new
chr19	58569204	58572775	chr19:58569204-58572775	1	-	58569268	58571389	789624	5	193,71,184,436,226,	0,311,1139,1789,3345,
#Partially deleted in new
chr19	58569333	58572737	chr19:58569333-58572737	0	-	58569333	58569333	8553170	4	64,71,1086,188,	0,182,1010,3216,
#Partially deleted in new
chr19	58571199	58573311	chr19:58571199-58573311	0	-	58571199	58571389	789624	3	230,170,257,	0,1350,1855,
#Partially deleted in new
chr19	58573502	58581646	chr19:58573502-58581646	5	+	58573502	58573502	16724991	2	167,402,	0,7742,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr19	58575444	58599801	chr19:58575444-58599801	7	+	58575444	58575444	16724991	4	144,202,127,835,	0,10710,16053,23522,
#Partially deleted in new
chr19	58575455	58599575	chr19:58575455-58599575	4	+	58575455	58575455	16724991	3	133,202,609,	0,10699,23511,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	58575459	58584397	chr19:58575459-58584397	4	+	58575459	58575459	16724991	2	129,3153,	0,5785,
#Deleted in new
chr19	58581425	58581912	chr19:58581425-58581912	7	+	58581425	58581425	16724991	1	487,	0,
#Deleted in new
chr19	58586157	58586356	chr19:58586157-58586356	7	+	58586157	58586157	16724991	1	199,	0,
#Deleted in new
chr19	58586284	58589494	chr19:58586284-58589494	4	+	58586284	58586284	16724991	3	72,53,287,	0,2781,2923,
#Deleted in new
chr19	58586284	58589494	chr19:58586284-58589494	4	+	58586284	58586284	16724991	3	72,49,287,	0,2781,2923,
#Deleted in new
chr19	58589065	58589495	chr19:58589065-58589495	4	+	58589065	58589065	16724991	2	49,285,	0,145,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr19	58593895	58599277	chr19:58593895-58599277	3	-	58593895	58593895	8553170	3	230,111,178,	0,3810,5204,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr19	58597182	58599355	chr19:58597182-58599355	1	-	58597182	58597182	8553170	2	634,256,	0,1917,
#Partially deleted in new
chr19	58598966	58599435	chr19:58598966-58599435	5	+	58598966	58598966	16724991	1	469,	0,
#Deleted in new
chr19_GL000209v2_alt	2843	11554	chr19_GL000209v2_alt:2843-11554	0	-	2843	11521	789624	6	51,294,300,285,36,67,	0,3215,5088,6852,7879,8644,
#Deleted in new
chr19_GL000209v2_alt	6056	11521	chr19_GL000209v2_alt:6056-11521	3	-	6056	11521	789624	4	296,300,36,34,	0,1875,4666,5431,
#Deleted in new
chr19_GL000209v2_alt	13876	27891	chr19_GL000209v2_alt:13876-27891	3	-	14049	27878	789624	8	215,53,105,51,294,300,36,47,	0,313,828,5196,8401,10220,12968,13968,
#Deleted in new
chr19_GL000209v2_alt	29980	44855	chr19_GL000209v2_alt:29980-44855	3	-	30509	44844	8553170	8	571,53,105,51,294,300,36,45,	0,669,1184,5554,8752,10574,13318,14830,
#Deleted in new
chr19_GL000209v2_alt	46834	56299	chr19_GL000209v2_alt:46834-56299	3	-	47247	56244	789624	8	683,53,105,51,294,285,36,89,	0,783,1298,4168,6391,7560,8607,9376,
#Deleted in new
chr19_GL000209v2_alt	58557	72919	chr19_GL000209v2_alt:58557-72919	3	-	59010	72882	789624	9	347,51,106,51,294,300,285,36,71,	0,445,958,5344,8565,10439,12227,13256,14291,
#Deleted in new
chr19_GL000209v2_alt	74866	85943	chr19_GL000209v2_alt:74866-85943	3	-	75272	85741	789624	7	676,53,51,294,285,36,242,	0,775,5637,8276,9449,10600,10835,
#Deleted in new
chr19_GL000209v2_alt	75261	85741	chr19_GL000209v2_alt:75261-85741	1	-	75272	85741	789624	8	281,53,105,51,294,285,36,40,	0,380,894,5242,7881,9054,10205,10440,
#Deleted in new
chr19_GL000209v2_alt	91107	104511	chr19_GL000209v2_alt:91107-104511	3	-	91413	104510	789624	6	344,294,300,285,36,35,	0,7966,9787,11537,12580,13369,
#Deleted in new
chr19_GL000209v2_alt	106542	137267	chr19_GL000209v2_alt:106542-137267	3	-	107075	137230	789624	8	686,53,105,51,294,300,36,71,	0,17175,17690,22059,25278,27090,29826,30654,
#Deleted in new
chr19_GL000209v2_alt	106756	121079	chr19_GL000209v2_alt:106756-121079	3	-	107051	121050	789624	8	472,53,102,51,294,300,36,63,	0,570,1085,5452,8772,10580,13316,14260,
#Deleted in new
chr19_GL000209v2_alt	123237	137319	chr19_GL000209v2_alt:123237-137319	1	-	123577	137230	0	8	382,53,105,51,294,300,36,123,	0,480,995,5364,8583,10395,13131,13959,
#Deleted in new
chr19_GL000209v2_alt	139697	151260	chr19_GL000209v2_alt:139697-151260	3	-	139697	151255	789624	8	126,53,105,294,300,285,36,39,	0,224,739,6311,8183,9756,10811,11524,
#Deleted in new
chr19_GL000209v2_alt	162304	167842	chr19_GL000209v2_alt:162304-167842	7	-	162304	162304	16724991	7	358,51,303,297,310,285,523,	0,506,3044,3602,4108,4567,5015,
#Deleted in new
chr19_GL000209v2_alt	162525	167156	chr19_GL000209v2_alt:162525-167156	5	-	162525	162525	16724991	6	137,51,303,297,310,285,	0,285,2823,3381,3887,4346,
#Deleted in new
chr19_GL000209v2_alt	174852	175165	chr19_GL000209v2_alt:174852-175165	7	-	174852	174852	16724991	2	138,45,	0,268,
#Deleted in new
chr19_GL383573v1_alt	11782	33393	chr19_GL383573v1_alt:11782-33393	7	+	11782	11782	16724991	4	121,96,657,1300,	0,3702,16417,20311,
#Deleted in new
chr19_GL383573v1_alt	83782	92110	chr19_GL383573v1_alt:83782-92110	3	-	83782	83782	8553170	1	8328,	0,
#Deleted in new
chr19_GL383573v1_alt	113163	131457	chr19_GL383573v1_alt:113163-131457	1	+	129434	130752	789624	3	178,127,815,	0,16208,17479,
#Deleted in new
chr19_GL383573v1_alt	113169	135953	chr19_GL383573v1_alt:113169-135953	1	+	113307	135641	789624	4	141,127,96,410,	0,16202,17473,22374,
#Deleted in new
chr19_GL383573v1_alt	113307	144280	chr19_GL383573v1_alt:113307-144280	3	+	113307	144280	789624	4	3,127,96,1580,	0,16064,17335,29393,
#Deleted in new
chr19_GL383573v1_alt	121455	122012	chr19_GL383573v1_alt:121455-122012	7	-	121455	121455	16724991	1	557,	0,
#Deleted in new
chr19_GL383573v1_alt	152103	159104	chr19_GL383573v1_alt:152103-159104	3	+	152103	152103	8553170	2	2379,677,	0,6324,
#Deleted in new
chr19_GL383573v1_alt	181688	190628	chr19_GL383573v1_alt:181688-190628	7	-	181688	181688	16724991	3	89,125,137,	0,924,8803,
#Deleted in new
chr19_GL383573v1_alt	266497	292191	chr19_GL383573v1_alt:266497-292191	1	+	266676	278300	789624	4	182,127,82,172,	0,10802,11744,25522,
#Deleted in new
chr19_GL383573v1_alt	266528	292169	chr19_GL383573v1_alt:266528-292169	0	+	266676	292169	789624	4	151,127,78,150,	0,10771,11717,25491,
#Deleted in new
chr19_GL383573v1_alt	266551	287253	chr19_GL383573v1_alt:266551-287253	1	+	266676	286111	789624	4	128,127,99,1177,	0,10748,11673,19525,
#Deleted in new
chr19_GL383573v1_alt	266560	292067	chr19_GL383573v1_alt:266560-292067	0	+	266676	292067	789624	5	119,127,99,90,48,	0,10739,11664,23015,25459,
#Deleted in new
chr19_GL383573v1_alt	266560	288985	chr19_GL383573v1_alt:266560-288985	0	+	266676	288985	789624	4	119,127,99,211,	0,10739,11664,22214,
#Deleted in new
chr19_GL383573v1_alt	266563	293973	chr19_GL383573v1_alt:266563-293973	3	+	266676	293578	789624	4	116,127,99,1954,	0,10736,11661,25456,
#Deleted in new
chr19_GL383573v1_alt	266579	292369	chr19_GL383573v1_alt:266579-292369	0	+	278286	292369	789624	3	100,99,350,	0,11645,25440,
#Deleted in new
chr19_GL383573v1_alt	266585	287002	chr19_GL383573v1_alt:266585-287002	1	+	277392	286111	789624	4	107,127,99,926,	0,10714,11639,19491,
#Deleted in new
chr19_GL383573v1_alt	266676	293578	chr19_GL383573v1_alt:266676-293578	1	+	266676	293578	789624	3	3,127,1559,	0,10623,25343,
#Deleted in new
chr19_GL383573v1_alt	270060	271990	chr19_GL383573v1_alt:270060-271990	3	-	270060	270060	8553170	1	1930,	0,
#Deleted in new
chr19_GL383573v1_alt	279957	293970	chr19_GL383573v1_alt:279957-293970	1	+	280585	293578	789624	2	680,1951,	0,12062,
#Deleted in new
chr19_GL383573v1_alt	304332	308416	chr19_GL383573v1_alt:304332-308416	7	+	304332	304332	16724991	3	496,769,306,	0,1492,3778,
#Deleted in new
chr19_GL383573v1_alt	315537	326486	chr19_GL383573v1_alt:315537-326486	3	+	315537	315537	8553170	2	256,319,	0,10630,
#Deleted in new
chr19_GL383573v1_alt	363895	377460	chr19_GL383573v1_alt:363895-377460	0	+	364076	377460	789624	4	184,93,127,99,	0,2169,12836,13466,
#Deleted in new
chr19_GL383573v1_alt	363909	377460	chr19_GL383573v1_alt:363909-377460	0	+	364076	377460	789624	4	170,93,127,99,	0,2155,12822,13452,
#Deleted in new
chr19_GL383573v1_alt	363925	377460	chr19_GL383573v1_alt:363925-377460	0	+	364076	377460	789624	4	154,93,127,99,	0,2139,12806,13436,
#Deleted in new
chr19_GL383573v1_alt	363932	376993	chr19_GL383573v1_alt:363932-376993	0	+	363932	363932	8553170	3	147,93,262,	0,2132,12799,
#Deleted in new
chr19_GL383573v1_alt	363992	380078	chr19_GL383573v1_alt:363992-380078	3	+	364076	377468	789624	4	87,93,127,2714,	0,2072,12739,13372,
#Deleted in new
chr19_GL383573v1_alt	366064	377468	chr19_GL383573v1_alt:366064-377468	1	+	366064	377468	789624	3	93,127,104,	0,10667,11300,
#Deleted in new
chr19_GL383574v1_alt	20187	77063	chr19_GL383574v1_alt:20187-77063	1	+	20383	75132	0	10	317,164,130,123,177,66,183,172,232,1955,	0,22031,24187,36482,42677,43149,46945,47260,49061,54921,
#Deleted in new
chr19_GL383574v1_alt	20244	44407	chr19_GL383574v1_alt:20244-44407	0	+	20383	42983	789624	4	260,164,102,33,	0,21974,22715,24130,
#Deleted in new
chr19_GL383574v1_alt	20278	75844	chr19_GL383574v1_alt:20278-75844	1	+	20383	74175	0	11	226,164,130,123,177,66,183,172,232,57,736,	0,21940,24096,36391,42586,43058,46854,47169,48970,53873,54830,
#Deleted in new
chr19_GL383574v1_alt	20398	69336	chr19_GL383574v1_alt:20398-69336	0	+	20398	69336	789624	8	106,164,130,123,66,183,172,88,	0,21820,23976,36271,42938,46734,47049,48850,
#Deleted in new
chr19_GL383574v1_alt	55936	77027	chr19_GL383574v1_alt:55936-77027	0	+	55936	55936	8553170	7	856,177,66,183,172,232,1919,	0,6928,7400,11196,11511,13312,19172,
#Deleted in new
chr19_GL383574v1_alt	67458	69521	chr19_GL383574v1_alt:67458-69521	0	+	67458	69521	789624	2	161,273,	0,1790,
#Deleted in new
chr19_GL383574v1_alt	69091	75361	chr19_GL383574v1_alt:69091-75361	0	+	69091	69091	8553170	3	389,57,253,	0,5060,6017,
#Deleted in new
chr19_GL383574v1_alt	69261	77035	chr19_GL383574v1_alt:69261-77035	2	+	69261	75132	789624	3	219,49,422,	0,5847,7352,
#Deleted in new
chr19_GL383574v1_alt	109450	155864	chr19_GL383574v1_alt:109450-155864	3	+	155387	155864	789624	2	78,1272,	0,45142,
#Deleted in new
chr19_GL383574v1_alt	109465	155864	chr19_GL383574v1_alt:109465-155864	0	+	155759	155864	789624	3	63,245,196,	0,45127,46203,
#Deleted in new
chr19_GL383574v1_alt	109494	155481	chr19_GL383574v1_alt:109494-155481	0	+	155387	155481	789624	3	34,245,303,	0,45098,45684,
#Deleted in new
chr19_GL383574v1_alt	120471	155384	chr19_GL383574v1_alt:120471-155384	0	+	120471	120471	8553170	2	64,792,	0,34121,
#Deleted in new
chr19_GL383574v1_alt	120481	154998	chr19_GL383574v1_alt:120481-154998	0	+	120481	120481	8553170	3	54,124,406,	0,19582,34111,
#Deleted in new
chr19_GL383574v1_alt	151189	151654	chr19_GL383574v1_alt:151189-151654	7	-	151189	151189	16724991	1	465,	0,
#Deleted in new
chr19_GL383575v2_alt	6864	8250	chr19_GL383575v2_alt:6864-8250	7	+	6864	6864	16724991	1	1386,	0,
#Deleted in new
chr19_GL383575v2_alt	38746	39417	chr19_GL383575v2_alt:38746-39417	7	-	38746	38746	16724991	1	671,	0,
#Deleted in new
chr19_GL383575v2_alt	70711	71381	chr19_GL383575v2_alt:70711-71381	7	+	70711	70711	16724991	1	670,	0,
#Deleted in new
chr19_GL383575v2_alt	80990	81225	chr19_GL383575v2_alt:80990-81225	7	-	80990	80990	16724991	1	235,	0,
#Deleted in new
chr19_GL383575v2_alt	83955	128716	chr19_GL383575v2_alt:83955-128716	3	-	87872	128619	789624	5	5224,99,127,93,100,	0,21251,22175,42928,44661,
#Deleted in new
chr19_GL383575v2_alt	87382	111973	chr19_GL383575v2_alt:87382-111973	1	-	87872	106164	789624	4	1797,96,127,263,	0,17824,18748,24328,
#Deleted in new
chr19_GL383575v2_alt	89120	111902	chr19_GL383575v2_alt:89120-111902	0	-	89120	106164	789624	5	59,96,127,74,192,	0,16086,17010,18885,22590,
#Deleted in new
chr19_GL383575v2_alt	104267	128739	chr19_GL383575v2_alt:104267-128739	0	-	104267	128619	789624	5	146,99,127,93,123,	0,939,1863,22616,24349,
#Deleted in new
chr19_GL383575v2_alt	111936	114628	chr19_GL383575v2_alt:111936-114628	7	+	111936	111936	16724991	1	2692,	0,
#Deleted in new
chr19_GL383575v2_alt	112036	113109	chr19_GL383575v2_alt:112036-113109	5	+	112036	112036	16724991	1	1073,	0,
#Deleted in new
chr19_GL383575v2_alt	114382	126966	chr19_GL383575v2_alt:114382-126966	0	-	114382	114382	8553170	2	381,83,	0,12501,
#Deleted in new
chr19_GL383575v2_alt	129961	154821	chr19_GL383575v2_alt:129961-154821	3	-	129961	129961	8553170	2	356,115,	0,24745,
#Deleted in new
chr19_GL383575v2_alt	150069	155050	chr19_GL383575v2_alt:150069-155050	1	-	150069	150069	8553170	2	221,344,	0,4637,
#Deleted in new
chr19_GL383575v2_alt	161677	162384	chr19_GL383575v2_alt:161677-162384	7	+	161677	161677	16724991	1	707,	0,
#Deleted in new
chr19_GL383575v2_alt	166139	170222	chr19_GL383575v2_alt:166139-170222	3	-	168796	170222	789624	1	4083,	0,
#Deleted in new
chr19_GL383575v2_alt	168470	170222	chr19_GL383575v2_alt:168470-170222	0	-	168796	170222	789624	1	1752,	0,
#Deleted in new
chr19_GL383575v2_alt	168515	170222	chr19_GL383575v2_alt:168515-170222	0	-	168796	170222	789624	1	1707,	0,
#Deleted in new
chr19_GL383575v2_alt	168542	170222	chr19_GL383575v2_alt:168542-170222	0	-	168796	170222	789624	1	1680,	0,
#Deleted in new
chr19_GL383576v1_alt	798	1690	chr19_GL383576v1_alt:798-1690	7	+	798	798	16724991	2	335,231,	0,661,
#Deleted in new
chr19_GL383576v1_alt	14111	14259	chr19_GL383576v1_alt:14111-14259	3	-	14111	14141	789624	1	148,	0,
#Deleted in new
chr19_GL383576v1_alt	39331	40974	chr19_GL383576v1_alt:39331-40974	3	-	39331	39331	8553170	2	287,99,	0,1544,
#Deleted in new
chr19_GL383576v1_alt	55319	57413	chr19_GL383576v1_alt:55319-57413	3	+	55319	55319	8553170	1	2094,	0,
#Deleted in new
chr19_GL383576v1_alt	93187	128920	chr19_GL383576v1_alt:93187-128920	3	+	93256	128848	789624	9	72,21,69,127,96,686,252,411,114,	0,2159,2183,18960,22575,34100,34870,35206,35619,
#Deleted in new
chr19_GL383576v1_alt	104878	105754	chr19_GL383576v1_alt:104878-105754	7	-	104878	104878	16724991	2	119,455,	0,421,
#Deleted in new
chr19_GL383576v1_alt	111922	129783	chr19_GL383576v1_alt:111922-129783	1	+	112240	128924	789624	3	352,96,2496,	0,3840,15365,
#Deleted in new
chr19_GL383576v1_alt	133682	134108	chr19_GL383576v1_alt:133682-134108	7	+	133682	133682	16724991	1	426,	0,
#Deleted in new
chr19_GL383576v1_alt	167756	168342	chr19_GL383576v1_alt:167756-168342	7	-	167756	167756	16724991	1	586,	0,
#Deleted in new
chr19_GL383576v1_alt	169892	170943	chr19_GL383576v1_alt:169892-170943	7	-	169892	169892	16724991	1	1051,	0,
#Deleted in new
chr19_GL383576v1_alt	178384	178549	chr19_GL383576v1_alt:178384-178549	7	-	178384	178384	16724991	1	165,	0,
#Deleted in new
chr19_GL383576v1_alt	178550	180126	chr19_GL383576v1_alt:178550-180126	7	+	178550	178550	16724991	3	502,115,103,	0,870,1473,
#Deleted in new
chr19_GL949746v1_alt	15199	38320	chr19_GL949746v1_alt:15199-38320	1	-	15327	38144	789624	9	248,38,38,28,93,39,285,36,210,	0,946,1083,1336,1444,10577,17473,17864,22911,
#Deleted in new
chr19_GL949746v1_alt	15199	27563	chr19_GL949746v1_alt:15199-27563	1	-	15327	27563	789624	8	248,38,38,28,93,39,82,9,	0,946,1083,1336,1444,10577,12066,12355,
#Deleted in new
chr19_GL949746v1_alt	15199	38320	chr19_GL949746v1_alt:15199-38320	3	-	15327	38144	789624	8	248,38,38,28,39,285,36,210,	0,946,1083,1336,10577,17473,17864,22911,
#Deleted in new
chr19_GL949746v1_alt	15200	38320	chr19_GL949746v1_alt:15200-38320	1	-	15327	38144	789624	6	247,38,38,28,93,210,	0,945,1082,1335,1443,22910,
#Deleted in new
chr19_GL949746v1_alt	22732	38320	chr19_GL949746v1_alt:22732-38320	1	-	22732	38144	789624	5	38,39,285,36,210,	0,3044,9940,10331,15378,
#Deleted in new
chr19_GL949746v1_alt	44313	55747	chr19_GL949746v1_alt:44313-55747	3	-	44369	55722	789624	5	214,297,291,36,59,	0,3971,4875,5934,11375,
#Deleted in new
chr19_GL949746v1_alt	69047	77107	chr19_GL949746v1_alt:69047-77107	3	-	70055	75196	0	6	1484,303,12,33,196,33,	0,2214,4946,5104,6112,8027,
#Deleted in new
chr19_GL949746v1_alt	69047	75196	chr19_GL949746v1_alt:69047-75196	1	-	69598	75196	789624	6	688,282,304,14,33,37,	0,1202,2214,2520,5104,6112,
#Deleted in new
chr19_GL949746v1_alt	69047	77107	chr19_GL949746v1_alt:69047-77107	1	-	70055	75196	0	5	1484,303,33,196,33,	0,2214,5104,6112,8027,
#Deleted in new
chr19_GL949746v1_alt	69047	77107	chr19_GL949746v1_alt:69047-77107	1	-	69598	75196	0	7	688,282,303,12,33,196,33,	0,1202,2214,4946,5104,6112,8027,
#Deleted in new
chr19_GL949746v1_alt	69047	77107	chr19_GL949746v1_alt:69047-77107	1	-	70055	75196	0	4	1484,303,196,33,	0,2214,6112,8027,
#Deleted in new
chr19_GL949746v1_alt	77272	81393	chr19_GL949746v1_alt:77272-81393	3	+	77299	81322	789624	4	37,75,78,163,	0,262,3081,3958,
#Deleted in new
chr19_GL949746v1_alt	81432	90168	chr19_GL949746v1_alt:81432-90168	3	-	81469	89762	789624	6	157,219,70,71,259,429,	0,1013,1313,3114,7502,8307,
#Deleted in new
chr19_GL949746v1_alt	89902	106263	chr19_GL949746v1_alt:89902-106263	1	+	92771	105976	0	14	388,185,61,84,98,107,170,158,90,128,73,129,99,413,	0,2861,3163,6449,7086,8043,8338,9088,11113,12658,12890,13642,13857,15948,
#Deleted in new
chr19_GL949746v1_alt	89902	106263	chr19_GL949746v1_alt:89902-106263	3	+	92771	105866	0	13	388,185,61,84,98,107,170,158,90,128,73,314,413,	0,2861,3163,6449,7086,8043,8338,9088,11113,12658,12890,13642,15948,
#Deleted in new
chr19_GL949746v1_alt	112548	130557	chr19_GL949746v1_alt:112548-130557	3	+	117827	130257	0	18	274,75,68,75,90,129,96,220,134,57,388,124,199,100,199,133,126,399,	0,5229,5419,5742,5960,6306,6537,7898,8210,8901,10447,10919,11859,14527,14729,15168,16016,17610,
#Deleted in new
chr19_GL949746v1_alt	116224	130530	chr19_GL949746v1_alt:116224-130530	1	+	117827	130257	0	17	1628,68,75,90,129,96,220,134,57,388,124,199,100,199,133,126,372,	0,1743,2066,2284,2630,2861,4222,4534,5225,6771,7243,8183,10851,11053,11492,12340,13934,
#Deleted in new
chr19_GL949746v1_alt	118853	130530	chr19_GL949746v1_alt:118853-130530	1	+	120506	128355	789624	14	130,96,276,134,57,388,124,199,100,199,133,213,344,372,	0,232,1537,1905,2596,4142,4614,5554,8222,8424,8863,9177,9493,11305,
#Deleted in new
chr19_GL949746v1_alt	127792	130530	chr19_GL949746v1_alt:127792-130530	0	+	127792	127792	8553170	2	57,1966,	0,772,
#Deleted in new
chr19_GL949746v1_alt	127792	130531	chr19_GL949746v1_alt:127792-130531	0	+	127792	127792	8553170	4	57,213,344,373,	0,238,554,2366,
#Deleted in new
chr19_GL949746v1_alt	127792	130530	chr19_GL949746v1_alt:127792-130530	0	+	127792	130257	789624	3	57,126,372,	0,772,2366,
#Deleted in new
chr19_GL949746v1_alt	127792	129305	chr19_GL949746v1_alt:127792-129305	0	+	127792	128901	789624	3	57,126,512,	0,772,1001,
#Deleted in new
chr19_GL949746v1_alt	127852	130531	chr19_GL949746v1_alt:127852-130531	0	+	127852	127852	8553170	2	80,1967,	0,712,
#Deleted in new
chr19_GL949746v1_alt	128573	130531	chr19_GL949746v1_alt:128573-130531	0	+	128573	128573	8553170	2	117,424,	0,1534,
#Deleted in new
chr19_GL949746v1_alt	130470	134593	chr19_GL949746v1_alt:130470-134593	3	-	130570	134545	789624	4	320,263,180,180,	0,1142,2661,3943,
#Deleted in new
chr19_GL949746v1_alt	134957	135499	chr19_GL949746v1_alt:134957-135499	0	-	134957	134957	8553170	2	267,183,	0,359,
#Deleted in new
chr19_GL949746v1_alt	134957	147944	chr19_GL949746v1_alt:134957-147944	1	-	135155	147889	789624	15	267,79,156,131,184,98,127,164,168,148,122,233,149,214,134,	0,359,770,1022,1994,2561,2921,3609,4320,5306,8057,8334,9370,11721,12853,
#Deleted in new
chr19_GL949746v1_alt	134957	139560	chr19_GL949746v1_alt:134957-139560	0	-	134957	134957	8553170	9	267,79,156,131,184,98,127,235,283,	0,359,770,1022,1994,2561,2921,3538,4320,
#Deleted in new
chr19_GL949746v1_alt	134957	135822	chr19_GL949746v1_alt:134957-135822	0	-	134957	134957	8553170	3	267,144,95,	0,359,770,
#Deleted in new
chr19_GL949746v1_alt	135014	148022	chr19_GL949746v1_alt:135014-148022	3	-	135155	147889	789624	15	210,79,156,131,184,98,127,164,168,148,122,233,149,232,212,	0,302,713,965,1937,2504,2864,3552,4263,5249,8000,8277,9313,11664,12796,
#Deleted in new
chr19_GL949746v1_alt	136187	138324	chr19_GL949746v1_alt:136187-138324	0	-	136187	136187	8553170	2	1429,446,	0,1691,
#Deleted in new
chr19_GL949746v1_alt	137075	138113	chr19_GL949746v1_alt:137075-138113	0	-	137075	137075	8553170	3	60,98,235,	0,443,803,
#Deleted in new
chr19_GL949746v1_alt	139395	143326	chr19_GL949746v1_alt:139395-143326	0	-	139395	139395	8553170	3	50,148,312,	0,868,3619,
#Deleted in new
chr19_GL949746v1_alt	143007	147524	chr19_GL949746v1_alt:143007-147524	0	-	143007	143007	8553170	5	129,233,149,214,39,	0,284,1320,3671,4478,
#Deleted in new
chr19_GL949746v1_alt	148184	164679	chr19_GL949746v1_alt:148184-164679	1	-	148815	163127	789624	6	1019,177,361,160,130,545,	0,5369,7377,10129,14829,15950,
#Deleted in new
chr19_GL949746v1_alt	148186	164240	chr19_GL949746v1_alt:148186-164240	0	-	148186	148186	8553170	7	1017,177,361,160,130,79,106,	0,5367,7375,10127,14827,15043,15948,
#Deleted in new
chr19_GL949746v1_alt	148186	164679	chr19_GL949746v1_alt:148186-164679	1	-	148815	163305	789624	8	1017,177,361,160,127,130,79,545,	0,5367,7375,10127,13767,14827,15043,15948,
#Deleted in new
chr19_GL949746v1_alt	148190	155579	chr19_GL949746v1_alt:148190-155579	0	-	148190	148190	8553170	2	1013,2026,	0,5363,
#Deleted in new
chr19_GL949746v1_alt	148826	155926	chr19_GL949746v1_alt:148826-155926	0	-	148826	148826	8553170	3	377,177,365,	0,4727,6735,
#Deleted in new
chr19_GL949746v1_alt	153111	164469	chr19_GL949746v1_alt:153111-164469	1	-	153549	163305	789624	7	619,361,160,127,130,79,335,	0,2450,5202,8842,9902,10118,11023,
#Deleted in new
chr19_GL949746v1_alt	155109	158427	chr19_GL949746v1_alt:155109-158427	0	-	155109	155109	8553170	2	813,114,	0,3204,
#Deleted in new
chr19_GL949746v1_alt	155647	164127	chr19_GL949746v1_alt:155647-164127	2	-	155647	163305	789624	6	275,160,127,130,79,140,	0,2666,6306,7366,7582,8340,
#Deleted in new
chr19_GL949746v1_alt	155805	163209	chr19_GL949746v1_alt:155805-163209	0	-	155805	155805	8553170	4	117,160,127,196,	0,2508,6148,7208,
#Deleted in new
chr19_GL949746v1_alt	155897	164141	chr19_GL949746v1_alt:155897-164141	0	-	155897	163305	789624	6	25,160,127,130,79,43,	0,2416,6056,7116,7332,8201,
#Deleted in new
chr19_GL949746v1_alt	161748	163311	chr19_GL949746v1_alt:161748-163311	0	-	161748	161748	8553170	3	332,130,82,	0,1265,1481,
#Deleted in new
chr19_GL949746v1_alt	162078	164366	chr19_GL949746v1_alt:162078-164366	0	-	162078	162078	8553170	4	24,130,79,232,	0,935,1151,2056,
#Deleted in new
chr19_GL949746v1_alt	163037	164584	chr19_GL949746v1_alt:163037-164584	0	-	163037	163037	8553170	2	106,450,	0,1097,
#Deleted in new
chr19_GL949746v1_alt	164734	167152	chr19_GL949746v1_alt:164734-167152	0	+	166161	167152	789624	4	225,247,244,240,	0,1423,1783,2178,
#Deleted in new
chr19_GL949746v1_alt	165064	168462	chr19_GL949746v1_alt:165064-168462	1	+	166161	168158	789624	5	183,247,244,258,492,	0,1093,1453,1848,2906,
#Deleted in new
chr19_GL949746v1_alt	165064	169332	chr19_GL949746v1_alt:165064-169332	3	+	165163	168467	789624	6	104,247,244,258,144,915,	0,1093,1453,1848,2906,3353,
#Deleted in new
chr19_GL949746v1_alt	165065	167170	chr19_GL949746v1_alt:165065-167170	0	+	165163	167170	789624	4	103,247,244,258,	0,1092,1452,1847,
#Deleted in new
chr19_GL949746v1_alt	165140	168461	chr19_GL949746v1_alt:165140-168461	0	+	165140	165140	8553170	3	1621,258,491,	0,1772,2830,
#Deleted in new
chr19_GL949746v1_alt	165527	168462	chr19_GL949746v1_alt:165527-168462	1	+	166161	168158	789624	5	307,247,244,258,492,	0,630,990,1385,2443,
#Deleted in new
chr19_GL949746v1_alt	166049	168461	chr19_GL949746v1_alt:166049-168461	1	+	166161	168158	789624	4	355,244,258,491,	0,468,863,1921,
#Deleted in new
chr19_GL949746v1_alt	175607	181751	chr19_GL949746v1_alt:175607-181751	0	+	175607	175607	8553170	4	80,122,123,677,	0,351,678,5467,
#Deleted in new
chr19_GL949746v1_alt	175621	176698	chr19_GL949746v1_alt:175621-176698	0	+	175621	175621	8553170	3	66,122,413,	0,337,664,
#Deleted in new
chr19_GL949746v1_alt	175652	182446	chr19_GL949746v1_alt:175652-182446	0	+	175652	175652	8553170	5	35,122,38,128,250,	0,306,633,5481,6544,
#Deleted in new
chr19_GL949746v1_alt	175656	182444	chr19_GL949746v1_alt:175656-182444	3	+	175983	182374	0	5	31,122,123,187,248,	0,302,629,5418,6540,
#Deleted in new
chr19_GL949746v1_alt	175656	223738	chr19_GL949746v1_alt:175656-223738	0	+	175656	175656	8553170	5	31,122,123,196,1912,	0,302,629,30893,46170,
#Deleted in new
chr19_GL949746v1_alt	175656	181364	chr19_GL949746v1_alt:175656-181364	1	+	175983	181364	789624	5	31,122,123,187,13,	0,302,629,5418,5695,
#Deleted in new
chr19_GL949746v1_alt	175671	182446	chr19_GL949746v1_alt:175671-182446	1	+	175983	182374	0	5	89,122,123,187,250,	0,287,614,5403,6525,
#Deleted in new
chr19_GL949746v1_alt	175673	181630	chr19_GL949746v1_alt:175673-181630	0	+	175673	175673	8553170	5	87,122,123,187,279,	0,285,612,5401,5678,
#Deleted in new
chr19_GL949746v1_alt	175931	182446	chr19_GL949746v1_alt:175931-182446	1	+	175983	182374	0	4	149,123,187,250,	0,354,5143,6265,
#Deleted in new
chr19_GL949746v1_alt	175956	182446	chr19_GL949746v1_alt:175956-182446	0	+	175956	175956	8553170	3	124,123,1372,	0,329,5118,
#Deleted in new
chr19_GL949746v1_alt	175956	176807	chr19_GL949746v1_alt:175956-176807	0	+	175956	175956	8553170	2	124,522,	0,329,
#Deleted in new
chr19_GL949746v1_alt	175956	182446	chr19_GL949746v1_alt:175956-182446	0	+	175956	175956	8553170	4	124,123,449,250,	0,329,5118,6240,
#Deleted in new
chr19_GL949746v1_alt	175956	182446	chr19_GL949746v1_alt:175956-182446	0	+	175956	175956	789624	5	124,123,187,172,250,	0,329,5118,5395,6240,
#Deleted in new
chr19_GL949746v1_alt	175956	182450	chr19_GL949746v1_alt:175956-182450	0	+	175956	175956	8553170	4	124,123,187,1099,	0,329,5118,5395,
#Deleted in new
chr19_GL949746v1_alt	180732	182446	chr19_GL949746v1_alt:180732-182446	0	+	180732	180732	8553170	3	529,172,250,	0,619,1464,
#Deleted in new
chr19_GL949746v1_alt	191473	197778	chr19_GL949746v1_alt:191473-197778	0	-	196582	197776	789624	14	566,156,53,38,76,117,51,303,297,169,217,285,36,36,	0,645,1687,1971,2089,2455,3481,3854,4409,4944,5240,5604,6073,6269,
#Deleted in new
chr19_GL949746v1_alt	191709	197829	chr19_GL949746v1_alt:191709-197829	3	-	191892	197776	789624	13	330,156,53,38,76,117,51,303,297,303,285,36,87,	0,409,1451,1735,1853,2219,3245,3618,4173,4918,5368,5837,6033,
#Deleted in new
chr19_GL949746v1_alt	191727	197778	chr19_GL949746v1_alt:191727-197778	0	-	193622	197776	789624	13	312,156,53,38,104,117,51,303,297,303,285,36,36,	0,391,1433,1717,1835,2201,3227,3600,4155,4900,5350,5819,6015,
#Deleted in new
chr19_GL949746v1_alt	191727	197778	chr19_GL949746v1_alt:191727-197778	1	-	191892	197776	789624	13	312,159,53,38,76,117,51,303,297,303,285,36,36,	0,391,1433,1717,1835,2201,3227,3600,4155,4900,5350,5819,6015,
#Deleted in new
chr19_GL949746v1_alt	191727	197778	chr19_GL949746v1_alt:191727-197778	0	-	191727	191727	8553170	12	312,156,38,76,117,51,303,297,217,285,36,36,	0,391,1717,1835,2201,3227,3600,4155,4986,5350,5819,6015,
#Deleted in new
chr19_GL949746v1_alt	191727	197778	chr19_GL949746v1_alt:191727-197778	1	-	191892	197776	789624	14	312,156,53,38,76,117,51,51,303,297,303,285,36,36,	0,391,1433,1717,1835,2201,2941,3227,3600,4155,4900,5350,5819,6015,
#Deleted in new
chr19_GL949746v1_alt	193394	194155	chr19_GL949746v1_alt:193394-194155	0	-	193394	193394	8553170	3	88,76,227,	0,168,534,
#Deleted in new
chr19_GL949746v1_alt	196089	197887	chr19_GL949746v1_alt:196089-197887	0	-	196089	196089	8553170	4	90,303,285,341,	0,538,988,1457,
#Deleted in new
chr19_GL949746v1_alt	203836	205014	chr19_GL949746v1_alt:203836-205014	7	+	203836	203836	16724991	1	1178,	0,
#Deleted in new
chr19_GL949746v1_alt	213258	217512	chr19_GL949746v1_alt:213258-217512	0	-	215888	217495	789624	9	128,268,51,303,297,217,285,36,51,	0,336,1415,1788,2343,3174,3538,4007,4203,
#Deleted in new
chr19_GL949746v1_alt	213701	217539	chr19_GL949746v1_alt:213701-217539	3	-	213725	217495	789624	7	161,51,303,303,285,36,78,	0,972,1345,2645,3095,3564,3760,
#Deleted in new
chr19_GL949746v1_alt	213725	217495	chr19_GL949746v1_alt:213725-217495	1	-	213725	217495	789624	8	137,51,303,297,303,285,36,34,	0,948,1321,1876,2621,3071,3540,3736,
#Deleted in new
chr19_GL949746v1_alt	216625	217485	chr19_GL949746v1_alt:216625-217485	0	-	216625	216625	8553170	3	24,285,220,	0,171,640,
#Deleted in new
chr19_GL949746v1_alt	225147	226123	chr19_GL949746v1_alt:225147-226123	0	-	225147	225147	8553170	2	520,378,	0,598,
#Deleted in new
chr19_GL949746v1_alt	225159	232027	chr19_GL949746v1_alt:225159-232027	0	-	225159	225159	8553170	12	745,53,38,64,1198,51,303,297,300,169,36,133,	0,1629,1941,2061,2446,3940,4310,4861,5618,6064,6536,6735,
#Deleted in new
chr19_GL949746v1_alt	225201	232008	chr19_GL949746v1_alt:225201-232008	1	-	225520	231928	789624	12	466,53,38,64,117,51,51,303,297,285,36,114,	0,1587,1899,2019,2404,3551,3898,4268,4819,6022,6494,6693,
#Deleted in new
chr19_GL949746v1_alt	225203	232049	chr19_GL949746v1_alt:225203-232049	3	-	225520	231928	789624	13	464,53,38,64,117,48,51,303,297,300,285,36,155,	0,1585,1897,2017,2402,3549,3896,4266,4817,5574,6020,6492,6691,
#Deleted in new
chr19_GL949746v1_alt	225230	231999	chr19_GL949746v1_alt:225230-231999	1	-	225520	231928	789624	13	437,53,38,64,117,51,51,303,297,300,285,36,105,	0,1558,1870,1990,2375,3522,3869,4239,4790,5547,5993,6465,6664,
#Deleted in new
chr19_GL949746v1_alt	225280	231980	chr19_GL949746v1_alt:225280-231980	0	-	225280	225280	8553170	3	4492,297,757,	0,4740,5943,
#Deleted in new
chr19_GL949746v1_alt	225317	231997	chr19_GL949746v1_alt:225317-231997	1	-	225520	231928	789624	14	350,159,53,38,64,117,48,51,303,297,300,285,36,103,	0,428,1471,1783,1903,2288,3435,3782,4152,4703,5460,5906,6378,6577,
#Deleted in new
chr19_GL949746v1_alt	226499	227723	chr19_GL949746v1_alt:226499-227723	0	-	226499	226499	8553170	5	196,53,38,64,118,	0,289,601,721,1106,
#Deleted in new
chr19_GL949746v1_alt	226781	227451	chr19_GL949746v1_alt:226781-227451	0	-	226781	226781	8553170	2	60,351,	0,319,
#Deleted in new
chr19_GL949746v1_alt	228946	230071	chr19_GL949746v1_alt:228946-230071	0	-	228946	228946	8553170	3	204,303,51,	0,523,1074,
#Deleted in new
chr19_GL949746v1_alt	229487	231996	chr19_GL949746v1_alt:229487-231996	0	-	229487	229487	8553170	5	285,297,285,36,102,	0,533,1736,2208,2407,
#Deleted in new
chr19_GL949746v1_alt	230241	232020	chr19_GL949746v1_alt:230241-232020	0	-	230241	230241	8553170	5	76,56,285,36,126,	0,536,982,1454,1653,
#Deleted in new
chr19_GL949746v1_alt	230289	231945	chr19_GL949746v1_alt:230289-231945	0	-	230289	230289	8553170	3	28,285,250,	0,934,1406,
#Deleted in new
chr19_GL949746v1_alt	230889	232006	chr19_GL949746v1_alt:230889-232006	0	-	230889	230889	8553170	3	188,285,311,	0,334,806,
#Deleted in new
chr19_GL949746v1_alt	230951	232344	chr19_GL949746v1_alt:230951-232344	0	-	230951	231928	789624	5	126,285,36,85,133,	0,272,744,943,1260,
#Deleted in new
chr19_GL949746v1_alt	238689	238792	chr19_GL949746v1_alt:238689-238792	3	-	238689	238689	8553170	1	103,	0,
#Deleted in new
chr19_GL949746v1_alt	242749	243783	chr19_GL949746v1_alt:242749-243783	7	+	242749	242749	16724991	1	1034,	0,
#Deleted in new
chr19_GL949746v1_alt	248561	255622	chr19_GL949746v1_alt:248561-255622	3	-	249421	255235	0	14	1007,53,38,76,123,48,51,303,297,303,285,36,82,80,	0,2128,2441,2558,2984,3727,4066,4437,4989,5522,5968,6441,6640,6981,
#Deleted in new
chr19_GL949746v1_alt	249090	255825	chr19_GL949746v1_alt:249090-255825	1	-	249421	255235	0	14	478,53,38,76,123,48,51,303,297,303,285,36,82,126,	0,1599,1912,2029,2455,3198,3537,3908,4460,4993,5439,5912,6111,6609,
#Deleted in new
chr19_GL949746v1_alt	249164	255918	chr19_GL949746v1_alt:249164-255918	1	-	249421	255235	0	14	404,53,38,76,123,51,51,303,297,303,285,36,82,219,	0,1525,1838,1955,2381,3124,3463,3834,4386,4919,5365,5838,6037,6535,
#Deleted in new
chr19_GL949746v1_alt	249177	255836	chr19_GL949746v1_alt:249177-255836	0	-	249177	249177	8553170	13	391,53,38,76,794,51,303,297,303,285,36,82,137,	0,1512,1825,1942,2368,3450,3821,4373,4906,5352,5825,6024,6522,
#Deleted in new
chr19_GL949746v1_alt	249189	255313	chr19_GL949746v1_alt:249189-255313	0	-	249189	249189	789624	13	379,53,38,76,173,48,51,303,297,303,285,36,112,	0,1500,1813,1930,2356,3099,3438,3809,4361,4894,5340,5813,6012,
#Deleted in new
chr19_GL949746v1_alt	249234	253283	chr19_GL949746v1_alt:249234-253283	0	-	249234	249234	8553170	8	334,53,55,76,123,51,51,285,	0,1455,1751,1885,2311,3054,3393,3764,
#Deleted in new
chr19_GL949746v1_alt	249252	255237	chr19_GL949746v1_alt:249252-255237	1	-	250730	255235	789624	12	316,53,38,123,51,51,303,297,303,285,36,36,	0,1437,1750,2293,3036,3375,3746,4298,4831,5277,5750,5949,
#Deleted in new
chr19_GL949746v1_alt	250631	251282	chr19_GL949746v1_alt:250631-251282	0	-	250631	250631	8553170	2	409,163,	0,488,
#Deleted in new
chr19_GL949746v1_alt	250665	251938	chr19_GL949746v1_alt:250665-251938	0	-	250665	250665	8553170	4	77,38,76,393,	0,337,454,880,
#Deleted in new
chr19_GL949746v1_alt	254220	255566	chr19_GL949746v1_alt:254220-255566	0	-	254220	254220	8553170	4	166,285,36,365,	0,309,782,981,
#Deleted in new
chr19_GL949746v1_alt	254253	255859	chr19_GL949746v1_alt:254253-255859	0	-	254253	254253	8553170	4	133,285,36,160,	0,276,749,1446,
#Deleted in new
chr19_GL949746v1_alt	254275	255405	chr19_GL949746v1_alt:254275-255405	0	-	254275	254275	8553170	3	111,232,204,	0,254,926,
#Deleted in new
chr19_GL949746v1_alt	254283	255890	chr19_GL949746v1_alt:254283-255890	0	-	254283	254283	8553170	4	103,170,82,191,	0,246,918,1416,
#Deleted in new
chr19_GL949746v1_alt	254528	255847	chr19_GL949746v1_alt:254528-255847	0	-	254528	254528	8553170	4	286,36,75,148,	0,474,673,1171,
#Deleted in new
chr19_GL949746v1_alt	254543	255846	chr19_GL949746v1_alt:254543-255846	0	-	254543	254543	8553170	4	271,51,82,147,	0,459,658,1156,
#Deleted in new
chr19_GL949746v1_alt	254751	255831	chr19_GL949746v1_alt:254751-255831	0	-	254751	254751	8553170	3	63,281,132,	0,251,948,
#Deleted in new
chr19_GL949746v1_alt	254771	256056	chr19_GL949746v1_alt:254771-256056	0	-	254771	255235	789624	5	43,36,82,117,68,	0,231,430,928,1217,
#Deleted in new
chr19_GL949746v1_alt	268529	275623	chr19_GL949746v1_alt:268529-275623	3	-	268787	275058	789624	10	382,34,51,303,297,303,288,36,82,135,	0,542,2409,4282,4838,5371,5821,6298,6495,6959,
#Deleted in new
chr19_GL949746v1_alt	270738	275150	chr19_GL949746v1_alt:270738-275150	1	-	270930	275058	0	7	251,303,297,303,288,36,126,	0,2073,2629,3162,3612,4089,4286,
#Deleted in new
chr19_GL949746v1_alt	274392	280828	chr19_GL949746v1_alt:274392-280828	0	-	274392	275058	789624	6	246,36,214,118,36,92,	0,435,632,1096,5684,6344,
#Deleted in new
chr19_GL949746v1_alt	274595	280823	chr19_GL949746v1_alt:274595-280823	0	-	274595	275058	789624	7	43,36,82,118,65,36,87,	0,232,429,893,1193,5481,6141,
#Deleted in new
chr19_GL949746v1_alt	288497	294554	chr19_GL949746v1_alt:288497-294554	3	-	288842	294434	0	7	482,51,303,285,36,85,123,	0,630,4331,4781,5252,5454,5934,
#Deleted in new
chr19_GL949746v1_alt	288681	294489	chr19_GL949746v1_alt:288681-294489	1	-	288842	294434	0	6	298,51,303,285,85,58,	0,446,4147,4597,5270,5750,
#Deleted in new
chr19_GL949746v1_alt	290326	302003	chr19_GL949746v1_alt:290326-302003	0	-	290326	290326	8553170	4	661,239,85,167,	0,1393,3625,11510,
#Deleted in new
chr19_GL949746v1_alt	292579	294506	chr19_GL949746v1_alt:292579-294506	1	-	292742	294434	0	4	552,285,85,75,	0,699,1372,1852,
#Deleted in new
chr19_GL949746v1_alt	292697	294513	chr19_GL949746v1_alt:292697-294513	1	-	292742	294434	0	5	434,285,36,85,82,	0,581,1052,1254,1734,
#Deleted in new
chr19_GL949746v1_alt	321736	328773	chr19_GL949746v1_alt:321736-328773	0	+	321736	321736	8553170	5	76,72,179,112,66,	0,388,3909,6058,6971,
#Deleted in new
chr19_GL949746v1_alt	321948	343424	chr19_GL949746v1_alt:321948-343424	1	+	322070	342653	789624	14	248,179,112,221,96,73,76,56,93,93,143,46,84,568,	0,3697,5846,6759,11242,13881,14456,15124,15387,15673,20117,20403,20663,20908,
#Deleted in new
chr19_GL949746v1_alt	321967	343243	chr19_GL949746v1_alt:321967-343243	3	+	322070	342653	789624	14	229,179,112,221,96,73,76,56,93,93,143,46,81,387,	0,3678,5827,6740,11223,13862,14437,15105,15368,15654,20098,20384,20647,20889,
#Deleted in new
chr19_GL949746v1_alt	321982	328931	chr19_GL949746v1_alt:321982-328931	0	+	321982	321982	8553170	6	214,11,136,179,112,224,	0,591,1324,3663,5812,6725,
#Deleted in new
chr19_GL949746v1_alt	321985	326013	chr19_GL949746v1_alt:321985-326013	0	+	321985	321985	8553170	2	211,368,	0,3660,
#Deleted in new
chr19_GL949746v1_alt	322029	343243	chr19_GL949746v1_alt:322029-343243	0	+	322029	322029	8553170	15	167,869,179,112,221,96,73,76,56,93,93,143,46,81,387,	0,544,3616,5765,6678,11161,13800,14375,15043,15306,15592,20036,20322,20585,20827,
#Deleted in new
chr19_GL949746v1_alt	322043	343240	chr19_GL949746v1_alt:322043-343240	1	+	322070	342890	789624	13	153,179,112,221,96,73,76,56,93,93,143,81,384,	0,3602,5751,6664,11147,13786,14361,15029,15292,15578,20022,20571,20813,
#Deleted in new
chr19_GL949746v1_alt	323206	328804	chr19_GL949746v1_alt:323206-328804	0	+	323206	323206	8553170	4	236,179,112,97,	0,2439,4588,5501,
#Deleted in new
chr19_GL949746v1_alt	323320	340235	chr19_GL949746v1_alt:323320-340235	1	+	326010	337816	789624	10	122,415,112,221,96,73,76,56,93,2614,	0,2325,4474,5387,9870,12509,13084,13752,14015,14301,
#Deleted in new
chr19_GL949746v1_alt	324779	326054	chr19_GL949746v1_alt:324779-326054	0	+	324779	324779	8553170	3	451,179,86,	0,866,1189,
#Deleted in new
chr19_GL949746v1_alt	325713	328811	chr19_GL949746v1_alt:325713-328811	0	+	325713	325713	8553170	3	347,112,95,	0,2081,3003,
#Deleted in new
chr19_GL949746v1_alt	327185	333251	chr19_GL949746v1_alt:327185-333251	0	+	327185	327185	8553170	4	165,112,221,61,	0,609,1522,6005,
#Deleted in new
chr19_GL949746v1_alt	327216	335876	chr19_GL949746v1_alt:327216-335876	0	+	327216	327216	8553170	5	103,112,221,96,47,	0,578,1491,5974,8613,
#Deleted in new
chr19_GL949746v1_alt	332991	343243	chr19_GL949746v1_alt:332991-343243	0	+	332991	332991	8553170	11	93,96,73,76,56,93,93,143,46,81,387,	0,199,2838,3413,4081,4344,4630,9074,9360,9623,9865,
#Deleted in new
chr19_GL949746v1_alt	332991	343242	chr19_GL949746v1_alt:332991-343242	1	+	333082	342653	789624	11	93,96,73,76,56,93,93,143,46,84,386,	0,199,2838,3413,4081,4344,4630,9074,9360,9620,9865,
#Deleted in new
chr19_GL949746v1_alt	336440	342999	chr19_GL949746v1_alt:336440-342999	0	+	336440	336440	8553170	7	40,56,93,93,143,46,385,	0,632,895,1181,5625,5911,6174,
#Deleted in new
chr19_GL949746v1_alt	337176	341222	chr19_GL949746v1_alt:337176-341222	3	-	337176	337176	8553170	2	472,57,	0,3989,
#Deleted in new
chr19_GL949746v1_alt	341483	342852	chr19_GL949746v1_alt:341483-342852	0	+	341483	341483	8553170	4	154,143,46,238,	0,582,868,1131,
#Deleted in new
chr19_GL949746v1_alt	342528	343241	chr19_GL949746v1_alt:342528-343241	0	+	342528	342528	8553170	2	167,385,	0,328,
#Deleted in new
chr19_GL949746v1_alt	355230	368530	chr19_GL949746v1_alt:355230-368530	1	+	357856	367442	789624	16	592,93,175,102,111,253,142,204,279,141,286,102,69,130,208,1251,	0,2571,3374,3934,4829,5713,6234,6647,7250,7608,7919,9030,9217,9386,9597,12049,
#Deleted in new
chr19_GL949746v1_alt	355398	368346	chr19_GL949746v1_alt:355398-368346	1	+	357856	368346	789624	16	424,93,175,102,253,142,204,279,141,286,102,69,130,254,141,30,	0,2403,3206,3766,5545,6066,6479,7082,7440,7751,8862,9049,9218,9429,12667,12918,
#Deleted in new
chr19_GL949746v1_alt	355711	361137	chr19_GL949746v1_alt:355711-361137	0	+	355711	355711	8553170	4	111,175,102,194,	0,2893,3453,5232,
#Deleted in new
chr19_GL949746v1_alt	356193	359226	chr19_GL949746v1_alt:356193-359226	0	+	357856	359226	789624	4	63,93,175,62,	0,1608,2411,2971,
#Deleted in new
chr19_GL949746v1_alt	360963	367914	chr19_GL949746v1_alt:360963-367914	2	+	360963	365420	789624	10	233,142,204,279,141,286,102,69,130,3087,	0,501,914,1517,1875,2186,3297,3484,3653,3864,
#Deleted in new
chr19_GL949746v1_alt	368304	370225	chr19_GL949746v1_alt:368304-370225	3	-	368603	370040	789624	1	1921,	0,
#Deleted in new
chr19_GL949746v1_alt	371538	379675	chr19_GL949746v1_alt:371538-379675	3	-	371613	372060	789624	3	522,141,198,	0,6531,7939,
#Deleted in new
chr19_GL949746v1_alt	372008	378228	chr19_GL949746v1_alt:372008-378228	0	-	372008	372060	789624	2	52,159,	0,6061,
#Deleted in new
chr19_GL949746v1_alt	377979	379704	chr19_GL949746v1_alt:377979-379704	0	-	377979	377979	8553170	2	231,227,	0,1498,
#Deleted in new
chr19_GL949746v1_alt	404072	414390	chr19_GL949746v1_alt:404072-414390	0	+	404435	414390	789624	3	379,36,294,	0,5835,10024,
#Deleted in new
chr19_GL949746v1_alt	404072	414312	chr19_GL949746v1_alt:404072-414312	0	+	404435	414312	789624	2	379,216,	0,10024,
#Deleted in new
chr19_GL949746v1_alt	408862	417309	chr19_GL949746v1_alt:408862-417309	3	+	409123	416770	789624	5	295,36,294,51,583,	0,1045,5234,6373,7864,
#Deleted in new
chr19_GL949746v1_alt	409106	416888	chr19_GL949746v1_alt:409106-416888	1	+	409123	416770	789624	4	51,36,294,162,	0,801,4990,7620,
#Deleted in new
chr19_GL949746v1_alt	438998	449931	chr19_GL949746v1_alt:438998-449931	3	+	439005	448782	789624	9	41,36,279,306,293,51,123,53,196,	0,254,943,2797,4081,5176,9724,10576,10737,
#Deleted in new
chr19_GL949746v1_alt	441487	451938	chr19_GL949746v1_alt:441487-451938	0	+	441487	441487	8553170	4	614,293,685,2711,	0,1592,2687,7740,
#Deleted in new
chr19_GL949746v1_alt	443160	451967	chr19_GL949746v1_alt:443160-451967	0	+	443160	449781	789624	4	212,51,53,2232,	0,1014,6414,6575,
#Deleted in new
chr19_GL949746v1_alt	479309	481300	chr19_GL949746v1_alt:479309-481300	0	+	479309	479309	8553170	4	516,36,282,180,	0,1156,1381,1811,
#Deleted in new
chr19_GL949746v1_alt	479404	493657	chr19_GL949746v1_alt:479404-493657	3	+	480268	484072	789624	9	421,82,36,282,303,297,303,258,64,	0,816,1061,1286,1716,2241,2792,4450,14189,
#Deleted in new
chr19_GL949746v1_alt	479417	480827	chr19_GL949746v1_alt:479417-480827	0	+	479417	479417	8553170	4	408,215,36,137,	0,670,1048,1273,
#Deleted in new
chr19_GL949746v1_alt	480145	493937	chr19_GL949746v1_alt:480145-493937	1	+	480268	493736	0	7	157,36,282,303,297,303,347,	0,320,545,975,1500,2051,13445,
#Deleted in new
chr19_GL949746v1_alt	480229	493950	chr19_GL949746v1_alt:480229-493950	1	+	480268	493736	0	8	73,36,282,303,297,303,51,360,	0,236,461,891,1416,1967,13170,13361,
#Deleted in new
chr19_GL949746v1_alt	480230	493785	chr19_GL949746v1_alt:480230-493785	1	+	480268	493736	789624	6	72,282,303,297,303,195,	0,460,890,1415,1966,13360,
#Deleted in new
chr19_GL949746v1_alt	480268	493785	chr19_GL949746v1_alt:480268-493785	1	+	480268	493736	789624	5	34,36,244,152,195,	0,197,422,2079,13322,
#Deleted in new
chr19_GL949746v1_alt	499947	507465	chr19_GL949746v1_alt:499947-507465	1	+	500168	507207	789624	10	224,82,36,288,303,297,303,51,39,377,	0,639,883,1107,1542,2081,2631,5678,6954,7141,
#Deleted in new
chr19_GL949746v1_alt	499965	508771	chr19_GL949746v1_alt:499965-508771	3	+	500634	507207	789624	8	206,82,36,288,303,51,39,1683,	0,621,865,1089,1524,5660,6936,7123,
#Deleted in new
chr19_GL949746v1_alt	499971	508267	chr19_GL949746v1_alt:499971-508267	0	+	499971	499971	789624	9	200,36,288,303,181,303,51,39,1179,	0,859,1083,1518,2173,2607,5654,6930,7117,
#Deleted in new
chr19_GL949746v1_alt	500039	506110	chr19_GL949746v1_alt:500039-506110	0	+	500039	500039	789624	7	132,36,288,303,297,303,485,	0,791,1015,1450,1989,2539,5586,
#Deleted in new
chr19_GL949746v1_alt	500039	506106	chr19_GL949746v1_alt:500039-506106	0	+	500039	500039	789624	7	132,280,288,303,297,303,481,	0,547,1015,1450,1989,2539,5586,
#Deleted in new
chr19_GL949746v1_alt	500464	502805	chr19_GL949746v1_alt:500464-502805	0	+	500464	500464	8553170	6	204,235,111,26,157,227,	0,643,1025,1302,1704,2114,
#Deleted in new
chr19_GL949746v1_alt	523315	543942	chr19_GL949746v1_alt:523315-543942	1	+	537459	543264	0	16	420,117,82,36,288,303,297,303,51,48,123,76,38,53,156,825,	0,13587,14096,14341,14570,15005,15534,16086,16708,17044,17711,18174,18329,18627,19567,19802,
#Deleted in new
chr19_GL949746v1_alt	536869	543914	chr19_GL949746v1_alt:536869-543914	1	+	537459	543264	789624	15	150,82,36,288,303,297,303,51,51,123,76,38,53,156,797,	0,542,787,1016,1451,1980,2532,3154,3487,4157,4620,4775,5073,6013,6248,
#Deleted in new
chr19_GL949746v1_alt	536897	543563	chr19_GL949746v1_alt:536897-543563	3	+	537459	543264	789624	15	122,82,36,288,303,297,303,51,48,123,76,38,53,159,446,	0,514,759,988,1423,1952,2504,3126,3462,4129,4592,4747,5045,5982,6220,
#Deleted in new
chr19_GL949746v1_alt	536902	543914	chr19_GL949746v1_alt:536902-543914	1	+	537459	543264	789624	15	117,82,36,288,303,297,303,51,51,123,76,38,53,159,797,	0,509,754,983,1418,1947,2499,3121,3454,4124,4587,4742,5040,5977,6215,
#Deleted in new
chr19_GL949746v1_alt	537459	543264	chr19_GL949746v1_alt:537459-543264	1	+	537459	543264	789624	14	34,36,288,303,297,303,51,51,123,76,38,53,159,147,	0,197,426,861,1390,1942,2564,2897,3567,4030,4185,4483,5420,5658,
#Deleted in new
chr19_GL949746v1_alt	539081	539877	chr19_GL949746v1_alt:539081-539877	0	+	539081	539081	8553170	2	65,476,	0,320,
#Deleted in new
chr19_GL949746v1_alt	539508	540634	chr19_GL949746v1_alt:539508-540634	0	+	539508	539508	8553170	3	196,51,275,	0,515,851,
#Deleted in new
chr19_GL949746v1_alt	539511	540569	chr19_GL949746v1_alt:539511-540569	0	+	539511	539511	8553170	3	193,51,213,	0,512,845,
#Deleted in new
chr19_GL949746v1_alt	539528	543914	chr19_GL949746v1_alt:539528-543914	0	+	539528	539528	8553170	8	102,51,48,123,76,38,1096,797,	0,495,831,1498,1961,2116,2414,3589,
#Deleted in new
chr19_GL949746v1_alt	540756	542002	chr19_GL949746v1_alt:540756-542002	0	+	540756	540756	8553170	4	393,76,38,60,	0,733,888,1186,
#Deleted in new
chr19_GL949746v1_alt	550274	555984	chr19_GL949746v1_alt:550274-555984	7	+	550274	550274	16724991	2	78,1567,	0,4143,
#Deleted in new
chr19_GL949746v1_alt	554329	555236	chr19_GL949746v1_alt:554329-555236	5	+	554329	554329	16724991	1	907,	0,
#Deleted in new
chr19_GL949746v1_alt	568517	576762	chr19_GL949746v1_alt:568517-576762	3	+	569424	574422	789624	14	61,39,249,36,285,300,51,51,117,76,38,53,159,2487,	0,381,692,1417,1639,2071,2684,3015,3700,4125,4284,4582,5520,5758,
#Deleted in new
chr19_GL949746v1_alt	568547	573153	chr19_GL949746v1_alt:568547-573153	0	+	568547	568547	8553170	11	31,39,249,205,300,51,51,117,76,38,54,	0,351,662,1689,2041,2654,2985,3670,4095,4254,4552,
#Deleted in new
chr19_GL949746v1_alt	569345	574807	chr19_GL949746v1_alt:569345-574807	1	+	569424	574422	789624	12	113,36,285,300,51,51,117,76,38,56,156,532,	0,589,811,1243,1856,2187,2872,3297,3456,3751,4695,4930,
#Deleted in new
chr19_GL949746v1_alt	569361	572025	chr19_GL949746v1_alt:569361-572025	0	+	569361	569361	8553170	4	97,236,300,824,	0,844,1227,1840,
#Deleted in new
chr19_GL949746v1_alt	569385	574627	chr19_GL949746v1_alt:569385-574627	1	+	569424	574422	789624	12	73,36,285,300,51,51,117,76,38,53,156,352,	0,549,771,1203,1816,2147,2832,3257,3416,3714,4655,4890,
#Deleted in new
chr19_GL949746v1_alt	569410	574598	chr19_GL949746v1_alt:569410-574598	1	+	569424	574422	789624	12	48,36,285,300,51,51,117,76,38,56,159,323,	0,524,746,1178,1791,2122,2807,3232,3391,3686,4627,4865,
#Deleted in new
chr19_GL949746v1_alt	572200	573793	chr19_GL949746v1_alt:572200-573793	0	+	572200	572200	8553170	4	134,75,38,697,	0,443,601,896,
#Deleted in new
chr19_GL949746v1_alt	572688	573438	chr19_GL949746v1_alt:572688-573438	0	+	572688	572688	8553170	3	30,58,339,	0,113,411,
#Deleted in new
chr19_GL949746v1_alt	602599	606822	chr19_GL949746v1_alt:602599-606822	7	+	602599	602599	16724991	7	40,271,361,266,296,57,60,	0,190,608,1076,1591,3976,4163,
#Deleted in new
chr19_GL949746v1_alt	613909	619024	chr19_GL949746v1_alt:613909-619024	7	+	613909	613909	16724991	7	523,285,310,297,303,51,245,	0,686,1120,1639,2189,4671,4870,
#Deleted in new
chr19_GL949746v1_alt	614188	618871	chr19_GL949746v1_alt:614188-618871	5	+	614188	614188	16724991	7	244,285,310,297,303,51,92,	0,407,841,1360,1910,4392,4591,
#Deleted in new
chr19_GL949746v1_alt	630166	642181	chr19_GL949746v1_alt:630166-642181	3	+	630184	641741	789624	8	52,36,285,300,294,105,53,566,	0,729,1535,3093,4971,10731,11298,11449,
#Deleted in new
chr19_GL949746v1_alt	644159	658712	chr19_GL949746v1_alt:644159-658712	3	+	644190	658179	0	8	65,36,300,294,51,105,53,686,	0,992,3465,5278,8835,13149,13716,13867,
#Deleted in new
chr19_GL949746v1_alt	660682	673029	chr19_GL949746v1_alt:660682-673029	7	+	660682	660682	16724991	9	34,36,282,299,294,51,105,53,177,	0,1091,1851,3585,5407,8866,11452,12019,12170,
#Deleted in new
chr19_GL949746v1_alt	675468	680876	chr19_GL949746v1_alt:675468-680876	0	+	675468	675468	8553170	5	77,36,109,300,54,	0,1041,2473,3525,5354,
#Deleted in new
chr19_GL949746v1_alt	675485	689985	chr19_GL949746v1_alt:675485-689985	3	+	675511	689472	789624	8	60,36,300,294,51,102,53,690,	0,1024,3508,5337,8785,13095,13659,13810,
#Deleted in new
chr19_GL949746v1_alt	692013	695977	chr19_GL949746v1_alt:692013-695977	7	+	692013	692013	16724991	4	34,285,300,294,	0,108,1843,3670,
#Deleted in new
chr19_GL949746v1_alt	809537	816477	chr19_GL949746v1_alt:809537-816477	3	+	809575	816269	0	7	72,36,285,279,48,51,390,	0,149,373,3096,3870,6028,6550,
#Deleted in new
chr19_GL949746v1_alt	809537	816469	chr19_GL949746v1_alt:809537-816469	1	+	809575	816269	0	6	72,36,285,279,48,382,	0,149,373,3096,3870,6550,
#Deleted in new
chr19_GL949746v1_alt	809537	816469	chr19_GL949746v1_alt:809537-816469	1	+	809575	816269	0	6	72,36,279,48,51,382,	0,149,3096,3870,6028,6550,
#Deleted in new
chr19_GL949746v1_alt	809575	816269	chr19_GL949746v1_alt:809575-816269	1	+	809575	816269	0	5	34,279,48,51,182,	0,3058,3832,5990,6512,
#Deleted in new
chr19_GL949746v1_alt	826906	850903	chr19_GL949746v1_alt:826906-850903	1	-	827137	845109	0	10	364,168,171,171,171,198,1579,75,316,37,	0,6990,10060,10980,12752,14535,15379,17422,17926,23960,
#Deleted in new
chr19_GL949746v1_alt	826906	850903	chr19_GL949746v1_alt:826906-850903	3	-	827137	845109	0	11	364,171,168,171,171,171,198,1579,75,316,37,	0,4096,6990,10060,10980,12752,14535,15379,17422,17926,23960,
#Deleted in new
chr19_GL949746v1_alt	868681	904538	chr19_GL949746v1_alt:868681-904538	3	+	873413	904296	789624	13	94,297,45,72,66,1567,171,165,171,171,171,171,381,	0,4715,9216,12468,16333,16878,19763,20867,24738,25218,28985,32033,35476,
#Deleted in new
chr19_GL949746v1_alt	869740	904538	chr19_GL949746v1_alt:869740-904538	1	+	873413	904296	789624	14	125,155,73,45,72,66,1567,171,165,171,171,171,171,381,	0,3656,3880,8157,11409,15274,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949746v1_alt	869740	904538	chr19_GL949746v1_alt:869740-904538	1	+	873413	904296	789624	13	125,297,45,72,66,1567,171,165,171,171,171,171,381,	0,3656,8157,11409,15274,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949746v1_alt	869740	904538	chr19_GL949746v1_alt:869740-904538	1	+	873413	904296	789624	12	125,297,45,72,1567,171,165,171,171,171,171,381,	0,3656,8157,11409,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949746v1_alt	917102	941662	chr19_GL949746v1_alt:917102-941662	1	-	917479	941634	0	8	1461,55,60,54,285,258,33,62,	0,1974,4947,11513,13873,18434,18801,24498,
#Deleted in new
chr19_GL949746v1_alt	917102	941662	chr19_GL949746v1_alt:917102-941662	3	-	918318	941634	0	7	1461,51,60,285,258,33,62,	0,1978,4947,13873,18434,18801,24498,
#Deleted in new
chr19_GL949746v1_alt	947721	966615	chr19_GL949746v1_alt:947721-966615	3	-	948471	960177	789624	7	986,102,213,105,156,119,250,	0,3063,4005,4335,12329,14833,18644,
#Deleted in new
chr19_GL949747v2_alt	15199	38320	chr19_GL949747v2_alt:15199-38320	1	-	15327	38144	789624	9	248,38,38,28,93,39,285,36,210,	0,946,1083,1336,1444,10577,17473,17864,22911,
#Deleted in new
chr19_GL949747v2_alt	15199	38320	chr19_GL949747v2_alt:15199-38320	1	-	15327	38144	789624	8	248,38,38,28,39,285,36,210,	0,946,1083,1336,10577,17473,17864,22911,
#Deleted in new
chr19_GL949747v2_alt	15199	27563	chr19_GL949747v2_alt:15199-27563	1	-	15327	27563	789624	8	248,38,38,28,93,39,82,9,	0,946,1083,1336,1444,10577,12066,12355,
#Deleted in new
chr19_GL949747v2_alt	15200	38320	chr19_GL949747v2_alt:15200-38320	3	-	15327	38144	789624	6	247,38,38,28,93,210,	0,945,1082,1335,1443,22910,
#Deleted in new
chr19_GL949747v2_alt	22732	38320	chr19_GL949747v2_alt:22732-38320	1	-	22732	38144	789624	5	38,39,285,36,210,	0,3044,9940,10331,15378,
#Deleted in new
chr19_GL949747v2_alt	44313	55747	chr19_GL949747v2_alt:44313-55747	3	-	44369	55722	789624	5	214,297,291,36,59,	0,3971,4875,5934,11375,
#Deleted in new
chr19_GL949747v2_alt	69047	77107	chr19_GL949747v2_alt:69047-77107	1	-	70055	75196	0	4	1484,303,196,33,	0,2214,6112,8027,
#Deleted in new
chr19_GL949747v2_alt	69047	77107	chr19_GL949747v2_alt:69047-77107	1	-	70055	75196	0	6	1484,303,12,33,196,33,	0,2214,4946,5104,6112,8027,
#Deleted in new
chr19_GL949747v2_alt	69047	77107	chr19_GL949747v2_alt:69047-77107	1	-	70055	75196	0	5	1484,303,33,196,33,	0,2214,5104,6112,8027,
#Deleted in new
chr19_GL949747v2_alt	69047	77107	chr19_GL949747v2_alt:69047-77107	3	-	69598	75196	0	7	688,282,303,12,33,196,33,	0,1202,2214,4946,5104,6112,8027,
#Deleted in new
chr19_GL949747v2_alt	69047	75196	chr19_GL949747v2_alt:69047-75196	1	-	69598	75196	789624	6	688,282,304,14,33,37,	0,1202,2214,2520,5104,6112,
#Deleted in new
chr19_GL949747v2_alt	77272	81393	chr19_GL949747v2_alt:77272-81393	3	+	77299	81322	789624	4	37,75,78,163,	0,262,3081,3958,
#Deleted in new
chr19_GL949747v2_alt	81432	90168	chr19_GL949747v2_alt:81432-90168	3	-	81469	89762	789624	6	157,219,70,71,259,429,	0,1013,1313,3114,7502,8307,
#Deleted in new
chr19_GL949747v2_alt	89902	106263	chr19_GL949747v2_alt:89902-106263	1	+	92771	105976	0	14	388,185,61,84,98,107,170,158,90,128,73,129,99,413,	0,2861,3163,6449,7086,8043,8338,9088,11113,12658,12890,13642,13857,15948,
#Deleted in new
chr19_GL949747v2_alt	89902	106263	chr19_GL949747v2_alt:89902-106263	3	+	92771	105866	0	13	388,185,61,84,98,107,170,158,90,128,73,314,413,	0,2861,3163,6449,7086,8043,8338,9088,11113,12658,12890,13642,15948,
#Deleted in new
chr19_GL949747v2_alt	112548	130558	chr19_GL949747v2_alt:112548-130558	3	+	117827	130258	0	18	274,75,68,75,90,129,96,220,134,57,388,124,199,100,199,133,126,399,	0,5229,5419,5742,5960,6306,6537,7898,8210,8901,10447,10919,11859,14527,14729,15168,16016,17611,
#Deleted in new
chr19_GL949747v2_alt	116224	130531	chr19_GL949747v2_alt:116224-130531	1	+	117827	130258	0	17	1628,68,75,90,129,96,220,134,57,388,124,199,100,199,133,126,372,	0,1743,2066,2284,2630,2861,4222,4534,5225,6771,7243,8183,10851,11053,11492,12340,13935,
#Deleted in new
chr19_GL949747v2_alt	118853	130531	chr19_GL949747v2_alt:118853-130531	1	+	120506	128355	789624	14	130,96,276,134,57,388,124,199,100,199,133,213,344,372,	0,232,1537,1905,2596,4142,4614,5554,8222,8424,8863,9177,9493,11306,
#Deleted in new
chr19_GL949747v2_alt	130493	134559	chr19_GL949747v2_alt:130493-134559	3	-	130571	134546	789624	4	298,263,180,145,	0,1120,2639,3921,
#Deleted in new
chr19_GL949747v2_alt	135015	148058	chr19_GL949747v2_alt:135015-148058	3	-	135156	147926	789624	15	210,79,156,131,184,98,127,164,168,148,122,233,149,232,211,	0,302,713,965,1936,2504,2864,3554,4266,5251,7995,8272,9348,11737,12832,
#Deleted in new
chr19_GL949747v2_alt	148220	164847	chr19_GL949747v2_alt:148220-164847	1	-	148851	163298	789624	7	1019,177,361,160,130,79,545,	0,5375,7383,10297,14964,15180,16082,
#Deleted in new
chr19_GL949747v2_alt	148220	164847	chr19_GL949747v2_alt:148220-164847	1	-	148851	163298	789624	6	1019,177,361,160,130,545,	0,5375,7383,10297,14964,16082,
#Deleted in new
chr19_GL949747v2_alt	148220	164847	chr19_GL949747v2_alt:148220-164847	3	-	148851	163476	789624	8	1019,177,361,160,127,130,79,545,	0,5375,7383,10297,13936,14964,15180,16082,
#Deleted in new
chr19_GL949747v2_alt	165232	169508	chr19_GL949747v2_alt:165232-169508	1	+	166329	168331	789624	5	183,247,244,258,1365,	0,1093,1453,1848,2911,
#Deleted in new
chr19_GL949747v2_alt	165232	169508	chr19_GL949747v2_alt:165232-169508	3	+	165331	168640	789624	6	104,247,244,258,144,918,	0,1093,1453,1848,2911,3358,
#Deleted in new
chr19_GL949747v2_alt	165695	169508	chr19_GL949747v2_alt:165695-169508	1	+	166329	168331	789624	5	307,247,244,258,1365,	0,630,990,1385,2448,
#Deleted in new
chr19_GL949747v2_alt	175839	182627	chr19_GL949747v2_alt:175839-182627	3	+	176166	182557	789624	5	31,122,123,187,248,	0,302,629,5418,6540,
#Deleted in new
chr19_GL949747v2_alt	175839	181547	chr19_GL949747v2_alt:175839-181547	1	+	176166	181547	789624	5	31,122,123,187,13,	0,302,629,5418,5695,
#Deleted in new
chr19_GL949747v2_alt	268409	275504	chr19_GL949747v2_alt:268409-275504	3	-	268667	274939	789624	10	382,34,51,303,297,303,288,36,82,135,	0,542,2410,4283,4839,5372,5822,6299,6496,6960,
#Deleted in new
chr19_GL949747v2_alt	268603	274939	chr19_GL949747v2_alt:268603-274939	1	-	268649	274939	789624	6	64,125,151,254,36,34,	0,67,4089,5662,6105,6302,
#Deleted in new
chr19_GL949747v2_alt	270619	275031	chr19_GL949747v2_alt:270619-275031	1	-	270811	274939	0	7	251,303,297,303,288,36,126,	0,2073,2629,3162,3612,4089,4286,
#Deleted in new
chr19_GL949747v2_alt	274273	280705	chr19_GL949747v2_alt:274273-280705	0	-	274273	274939	789624	6	246,36,214,118,36,87,	0,435,632,1096,5685,6345,
#Deleted in new
chr19_GL949747v2_alt	274476	280719	chr19_GL949747v2_alt:274476-280719	0	-	274476	274939	789624	7	43,36,82,118,65,36,101,	0,232,429,893,1193,5482,6142,
#Deleted in new
chr19_GL949747v2_alt	288421	294485	chr19_GL949747v2_alt:288421-294485	3	-	288764	294365	0	7	480,51,303,285,36,85,123,	0,628,4338,4788,5259,5461,5941,
#Deleted in new
chr19_GL949747v2_alt	288603	294420	chr19_GL949747v2_alt:288603-294420	1	-	288764	294365	0	6	298,51,303,285,85,58,	0,446,4156,4606,5279,5759,
#Deleted in new
chr19_GL949747v2_alt	290260	318515	chr19_GL949747v2_alt:290260-318515	0	-	290260	290260	8553170	8	657,239,85,167,156,51,51,328,	0,1389,3622,11505,21185,23601,24999,27927,
#Deleted in new
chr19_GL949747v2_alt	292510	294437	chr19_GL949747v2_alt:292510-294437	1	-	292673	294365	0	4	552,285,85,75,	0,699,1372,1852,
#Deleted in new
chr19_GL949747v2_alt	292628	294444	chr19_GL949747v2_alt:292628-294444	1	-	292673	294365	0	5	434,285,36,85,82,	0,581,1052,1254,1734,
#Deleted in new
chr19_GL949747v2_alt	314885	320462	chr19_GL949747v2_alt:314885-320462	0	-	314885	314885	8553170	7	225,51,303,297,300,285,250,	0,374,3302,3861,4397,4857,5327,
#Deleted in new
chr19_GL949747v2_alt	314885	320516	chr19_GL949747v2_alt:314885-320516	3	-	314916	320440	789624	8	225,51,303,297,300,285,36,110,	0,374,3302,3861,4397,4857,5327,5521,
#Deleted in new
chr19_GL949747v2_alt	335058	337418	chr19_GL949747v2_alt:335058-337418	0	-	335058	335058	8553170	2	1762,59,	0,2301,
#Deleted in new
chr19_GL949747v2_alt	335158	351964	chr19_GL949747v2_alt:335158-351964	3	-	336673	351683	789624	9	1662,53,38,43,129,39,51,294,297,	0,2201,2477,2603,2738,3175,6267,7161,16509,
#Deleted in new
chr19_GL949747v2_alt	335889	337463	chr19_GL949747v2_alt:335889-337463	0	-	335889	335889	8553170	2	931,104,	0,1470,
#Deleted in new
chr19_GL949747v2_alt	335929	346423	chr19_GL949747v2_alt:335929-346423	1	-	336673	346208	789624	10	891,53,38,43,129,39,51,294,36,249,	0,1430,1706,1832,1967,2404,5496,6390,9769,10245,
#Deleted in new
chr19_GL949747v2_alt	336081	338753	chr19_GL949747v2_alt:336081-338753	0	-	336081	336081	8553170	5	739,53,38,43,857,	0,1278,1554,1680,1815,
#Deleted in new
chr19_GL949747v2_alt	336082	346269	chr19_GL949747v2_alt:336082-346269	1	-	336673	346208	0	9	738,53,38,43,129,39,294,36,95,	0,1277,1553,1679,1814,2251,6237,9616,10092,
#Deleted in new
chr19_GL949747v2_alt	336116	346423	chr19_GL949747v2_alt:336116-346423	1	-	336673	346208	789624	10	704,53,38,43,129,39,51,291,36,249,	0,1243,1519,1645,1780,2217,5309,6203,9582,10058,
#Deleted in new
chr19_GL949747v2_alt	336534	338282	chr19_GL949747v2_alt:336534-338282	0	-	336534	336534	8553170	5	286,53,38,43,386,	0,825,1101,1227,1362,
#Deleted in new
chr19_GL949747v2_alt	336547	346288	chr19_GL949747v2_alt:336547-346288	0	-	336547	336547	8553170	7	273,53,390,39,294,36,114,	0,812,1088,1786,5772,9151,9627,
#Deleted in new
chr19_GL949747v2_alt	336571	338157	chr19_GL949747v2_alt:336571-338157	0	-	336571	336571	8553170	5	249,53,169,129,40,	0,788,1064,1325,1546,
#Deleted in new
chr19_GL949747v2_alt	336606	342597	chr19_GL949747v2_alt:336606-342597	0	-	336606	336606	8553170	7	214,53,169,129,39,51,184,	0,753,1029,1290,1727,4819,5807,
#Deleted in new
chr19_GL949747v2_alt	336672	346211	chr19_GL949747v2_alt:336672-346211	0	-	336672	336672	8553170	9	148,53,169,129,39,51,294,36,37,	0,687,963,1224,1661,4753,5647,9026,9502,
#Deleted in new
chr19_GL949747v2_alt	336672	346211	chr19_GL949747v2_alt:336672-346211	1	-	336673	346208	0	9	148,53,38,43,129,39,291,36,37,	0,687,963,1089,1224,1661,5647,9026,9502,
#Deleted in new
chr19_GL949747v2_alt	336762	346240	chr19_GL949747v2_alt:336762-346240	0	-	336762	336762	789624	10	58,53,38,43,129,39,230,200,192,66,	0,597,873,999,1134,1571,4484,5651,8936,9412,
#Deleted in new
chr19_GL949747v2_alt	337385	346494	chr19_GL949747v2_alt:337385-346494	0	-	337385	337385	8553170	9	27,38,43,129,39,51,200,36,61,	0,250,376,511,948,4040,5028,8313,9048,
#Deleted in new
chr19_GL949747v2_alt	337642	346273	chr19_GL949747v2_alt:337642-346273	0	-	337642	337642	8553170	8	31,43,129,255,51,294,36,99,	0,119,254,475,3783,4677,8056,8532,
#Deleted in new
chr19_GL949747v2_alt	337962	346503	chr19_GL949747v2_alt:337962-346503	0	-	337962	337962	8553170	6	63,39,51,291,36,70,	0,371,3463,4357,7736,8471,
#Deleted in new
chr19_GL949747v2_alt	337990	346335	chr19_GL949747v2_alt:337990-346335	0	-	337990	337990	8553170	6	35,39,51,328,36,161,	0,343,3435,4329,7708,8184,
#Deleted in new
chr19_GL949747v2_alt	338237	346335	chr19_GL949747v2_alt:338237-346335	0	-	338237	338237	8553170	4	135,294,36,161,	0,4082,7461,7937,
#Deleted in new
chr19_GL949747v2_alt	338243	346289	chr19_GL949747v2_alt:338243-346289	0	-	338243	338243	8553170	5	129,51,200,36,115,	0,3182,4170,7455,7931,
#Deleted in new
chr19_GL949747v2_alt	338330	346335	chr19_GL949747v2_alt:338330-346335	0	-	338330	338330	8553170	5	42,51,234,36,161,	0,3095,4083,7368,7844,
#Deleted in new
chr19_GL949747v2_alt	341407	345905	chr19_GL949747v2_alt:341407-345905	0	-	341407	341407	8553170	3	69,294,207,	0,912,4291,
#Deleted in new
chr19_GL949747v2_alt	342098	346251	chr19_GL949747v2_alt:342098-346251	0	-	342098	342098	8553170	4	40,294,192,77,	0,221,3600,4076,
#Deleted in new
chr19_GL949747v2_alt	342203	346253	chr19_GL949747v2_alt:342203-346253	0	-	342203	342203	8553170	3	444,36,79,	0,3495,3971,
#Deleted in new
chr19_GL949747v2_alt	342319	346335	chr19_GL949747v2_alt:342319-346335	0	-	342319	342319	8553170	3	291,192,161,	0,3379,3855,
#Deleted in new
chr19_GL949747v2_alt	342362	346335	chr19_GL949747v2_alt:342362-346335	0	-	342362	342362	8553170	3	285,192,161,	0,3336,3812,
#Deleted in new
chr19_GL949747v2_alt	342363	350005	chr19_GL949747v2_alt:342363-350005	0	-	342363	342363	8553170	3	250,36,288,	0,3335,7354,
#Deleted in new
chr19_GL949747v2_alt	342365	352046	chr19_GL949747v2_alt:342365-352046	0	-	342365	342365	8553170	3	248,36,379,	0,3333,9302,
#Deleted in new
chr19_GL949747v2_alt	400762	402184	chr19_GL949747v2_alt:400762-402184	3	+	400762	401671	789624	3	119,53,690,	0,581,732,
#Deleted in new
chr19_GL949747v2_alt	404211	415835	chr19_GL949747v2_alt:404211-415835	7	+	404211	404211	16724991	5	35,327,300,294,38,	0,67,1844,3671,11586,
#Deleted in new
chr19_GL949747v2_alt	421305	432382	chr19_GL949747v2_alt:421305-432382	3	+	421507	431976	789624	7	242,36,285,294,51,53,676,	0,441,1343,2507,5389,10249,10401,
#Deleted in new
chr19_GL949747v2_alt	421466	432382	chr19_GL949747v2_alt:421466-432382	1	+	421507	431976	789624	8	81,36,285,294,51,105,53,676,	0,280,1182,2346,5228,9522,10088,10240,
#Deleted in new
chr19_GL949747v2_alt	434353	448830	chr19_GL949747v2_alt:434353-448830	3	+	434366	448238	789624	9	47,36,285,300,294,51,106,51,486,	0,1046,1826,3599,5479,8943,13274,13842,13991,
#Deleted in new
chr19_GL949747v2_alt	450949	460291	chr19_GL949747v2_alt:450949-460291	3	+	451004	460001	789624	8	89,36,285,294,51,105,53,560,	0,822,1620,2780,5246,8062,8629,8782,
#Deleted in new
chr19_GL949747v2_alt	462370	477391	chr19_GL949747v2_alt:462370-477391	3	+	462404	476739	789624	8	68,36,300,294,51,105,53,694,	0,1544,4024,5852,9293,13609,14176,14327,
#Deleted in new
chr19_GL949747v2_alt	479359	493288	chr19_GL949747v2_alt:479359-493288	3	+	479370	493199	789624	8	45,36,300,294,51,105,53,131,	0,1009,3493,5318,8766,13080,13647,13798,
#Deleted in new
chr19_GL949747v2_alt	495694	512489	chr19_GL949747v2_alt:495694-512489	3	+	495727	512005	789624	8	67,36,285,300,294,105,53,694,	0,796,1574,3323,5202,15384,15949,16101,
#Deleted in new
chr19_GL949747v2_alt	495715	512489	chr19_GL949747v2_alt:495715-512489	1	+	495727	512005	789624	9	46,36,285,300,294,51,105,53,694,	0,775,1553,3302,5181,8639,15363,15928,16080,
#Deleted in new
chr19_GL949747v2_alt	514212	514319	chr19_GL949747v2_alt:514212-514319	3	-	514212	514212	8553170	1	107,	0,
#Deleted in new
chr19_GL949747v2_alt	519502	536649	chr19_GL949747v2_alt:519502-536649	1	+	519557	535092	789624	5	89,36,291,288,1772,	0,1095,10964,13733,15375,
#Deleted in new
chr19_GL949747v2_alt	519515	534905	chr19_GL949747v2_alt:519515-534905	0	+	519557	534905	789624	3	76,291,28,	0,10951,15362,
#Deleted in new
chr19_GL949747v2_alt	519547	534313	chr19_GL949747v2_alt:519547-534313	1	+	519557	533594	789624	4	44,291,636,109,	0,10919,13688,14657,
#Deleted in new
chr19_GL949747v2_alt	519547	534313	chr19_GL949747v2_alt:519547-534313	1	+	519557	533594	789624	4	44,36,291,1078,	0,1050,10919,13688,
#Deleted in new
chr19_GL949747v2_alt	519552	535119	chr19_GL949747v2_alt:519552-535119	1	+	519557	535092	789624	4	39,36,291,242,	0,1045,10914,15325,
#Deleted in new
chr19_GL949747v2_alt	519552	535119	chr19_GL949747v2_alt:519552-535119	1	+	519557	535092	789624	5	39,36,291,222,242,	0,1045,10914,13683,15325,
#Deleted in new
chr19_GL949747v2_alt	519557	535101	chr19_GL949747v2_alt:519557-535101	1	+	519557	535092	789624	4	34,291,288,224,	0,10909,13678,15320,
#Deleted in new
chr19_GL949747v2_alt	519557	535101	chr19_GL949747v2_alt:519557-535101	1	+	519557	535092	0	3	34,288,224,	0,13678,15320,
#Deleted in new
chr19_GL949747v2_alt	519557	535092	chr19_GL949747v2_alt:519557-535092	0	+	519557	519557	8553170	4	34,77,292,215,	0,6542,10908,15320,
#Deleted in new
chr19_GL949747v2_alt	519557	535101	chr19_GL949747v2_alt:519557-535101	3	+	519557	535092	789624	4	34,291,222,224,	0,10909,13678,15320,
#Deleted in new
chr19_GL949747v2_alt	519557	533701	chr19_GL949747v2_alt:519557-533701	1	+	519557	533594	789624	3	34,36,466,	0,1040,13678,
#Deleted in new
chr19_GL949747v2_alt	551332	561217	chr19_GL949747v2_alt:551332-561217	0	+	551370	558061	0	8	72,36,285,279,48,51,389,211,	0,149,373,3094,3868,6026,6547,9674,
#Deleted in new
chr19_GL949747v2_alt	551337	554529	chr19_GL949747v2_alt:551337-554529	0	+	551337	551337	8553170	3	180,285,103,	0,368,3089,
#Deleted in new
chr19_GL949747v2_alt	551337	551961	chr19_GL949747v2_alt:551337-551961	0	+	551337	551337	8553170	2	67,480,	0,144,
#Deleted in new
chr19_GL949747v2_alt	551343	558146	chr19_GL949747v2_alt:551343-558146	3	+	551370	558061	0	7	61,36,285,279,48,51,267,	0,138,362,3083,3857,6015,6536,
#Deleted in new
chr19_GL949747v2_alt	551345	561328	chr19_GL949747v2_alt:551345-561328	0	+	551370	558061	0	8	59,36,285,279,48,48,466,391,	0,136,360,3081,3855,6016,6534,9592,
#Deleted in new
chr19_GL949747v2_alt	551359	558149	chr19_GL949747v2_alt:551359-558149	1	+	551370	558061	789624	6	45,285,279,48,48,270,	0,346,3067,3841,6002,6520,
#Deleted in new
chr19_GL949747v2_alt	551363	558163	chr19_GL949747v2_alt:551363-558163	1	+	551370	558061	0	6	41,36,279,48,51,284,	0,118,3063,3837,5995,6516,
#Deleted in new
chr19_GL949747v2_alt	551363	558163	chr19_GL949747v2_alt:551363-558163	1	+	551370	558061	0	6	41,36,285,279,48,284,	0,118,342,3063,3837,6516,
#Deleted in new
chr19_GL949747v2_alt	551363	558163	chr19_GL949747v2_alt:551363-558163	1	+	551370	558061	0	5	41,36,279,48,284,	0,118,3063,3837,6516,
#Deleted in new
chr19_GL949747v2_alt	551370	558061	chr19_GL949747v2_alt:551370-558061	1	+	551370	558061	0	5	34,279,48,51,182,	0,3056,3830,5988,6509,
#Deleted in new
chr19_GL949747v2_alt	568711	575865	chr19_GL949747v2_alt:568711-575865	0	-	568942	575865	789624	2	364,168,	0,6986,
#Deleted in new
chr19_GL949747v2_alt	568711	592707	chr19_GL949747v2_alt:568711-592707	1	-	568942	586913	0	11	364,171,168,171,171,171,198,1579,75,316,37,	0,4097,6986,10059,10979,12751,14534,15378,17421,17925,23959,
#Deleted in new
chr19_GL949747v2_alt	568711	592707	chr19_GL949747v2_alt:568711-592707	3	-	568942	586913	0	10	364,168,171,171,171,198,1579,75,316,37,	0,6986,10059,10979,12751,14534,15378,17421,17925,23959,
#Deleted in new
chr19_GL949747v2_alt	568731	575865	chr19_GL949747v2_alt:568731-575865	0	-	568942	575865	789624	3	344,171,168,	0,4077,6966,
#Deleted in new
chr19_GL949747v2_alt	568854	575865	chr19_GL949747v2_alt:568854-575865	0	-	572860	575865	789624	3	221,134,168,	0,3954,6843,
#Deleted in new
chr19_GL949747v2_alt	610485	646342	chr19_GL949747v2_alt:610485-646342	3	+	615217	646100	789624	13	94,297,45,72,66,1567,171,165,171,171,171,171,381,	0,4715,9216,12468,16333,16878,19763,20867,24738,25218,28985,32033,35476,
#Deleted in new
chr19_GL949747v2_alt	611544	646342	chr19_GL949747v2_alt:611544-646342	1	+	615217	646100	789624	14	125,155,73,45,72,66,1567,171,165,171,171,171,171,381,	0,3656,3880,8157,11409,15274,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949747v2_alt	611544	646342	chr19_GL949747v2_alt:611544-646342	1	+	615217	646100	789624	13	125,297,45,72,66,1567,171,165,171,171,171,171,381,	0,3656,8157,11409,15274,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949747v2_alt	611544	646342	chr19_GL949747v2_alt:611544-646342	1	+	615217	646100	789624	12	125,297,45,72,1567,171,165,171,171,171,171,381,	0,3656,8157,11409,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949747v2_alt	658906	683466	chr19_GL949747v2_alt:658906-683466	1	-	660122	683438	0	7	1461,51,60,285,258,33,62,	0,1978,4947,13873,18434,18801,24498,
#Deleted in new
chr19_GL949747v2_alt	658906	683466	chr19_GL949747v2_alt:658906-683466	3	-	659283	683438	0	8	1461,55,60,54,285,258,33,62,	0,1974,4947,11513,13873,18434,18801,24498,
#Deleted in new
chr19_GL949747v2_alt	689525	708419	chr19_GL949747v2_alt:689525-708419	3	-	690275	701981	789624	7	986,102,213,105,156,119,250,	0,3063,4005,4335,12329,14833,18644,
#Deleted in new
chr19_GL949748v2_alt	15199	38320	chr19_GL949748v2_alt:15199-38320	1	-	15327	38144	789624	9	248,38,38,28,93,39,285,36,210,	0,946,1083,1336,1444,10577,17473,17864,22911,
#Deleted in new
chr19_GL949748v2_alt	15199	38320	chr19_GL949748v2_alt:15199-38320	1	-	15327	38144	789624	8	248,38,38,28,39,285,36,210,	0,946,1083,1336,10577,17473,17864,22911,
#Deleted in new
chr19_GL949748v2_alt	15199	27563	chr19_GL949748v2_alt:15199-27563	3	-	15327	27563	789624	8	248,38,38,28,93,39,82,9,	0,946,1083,1336,1444,10577,12066,12355,
#Deleted in new
chr19_GL949748v2_alt	15200	38320	chr19_GL949748v2_alt:15200-38320	1	-	15327	38144	789624	6	247,38,38,28,93,210,	0,945,1082,1335,1443,22910,
#Deleted in new
chr19_GL949748v2_alt	22732	38320	chr19_GL949748v2_alt:22732-38320	1	-	22732	38144	789624	5	38,39,285,36,210,	0,3044,9940,10331,15378,
#Deleted in new
chr19_GL949748v2_alt	44313	55747	chr19_GL949748v2_alt:44313-55747	3	-	44369	55722	789624	5	214,297,291,36,59,	0,3971,4875,5934,11375,
#Deleted in new
chr19_GL949748v2_alt	69047	77107	chr19_GL949748v2_alt:69047-77107	1	-	69598	75196	0	7	688,282,303,12,33,196,33,	0,1202,2214,4946,5104,6112,8027,
#Deleted in new
chr19_GL949748v2_alt	69047	75196	chr19_GL949748v2_alt:69047-75196	1	-	69598	75196	789624	6	688,282,304,14,33,37,	0,1202,2214,2520,5104,6112,
#Deleted in new
chr19_GL949748v2_alt	69047	77107	chr19_GL949748v2_alt:69047-77107	1	-	70055	75196	0	4	1484,303,196,33,	0,2214,6112,8027,
#Deleted in new
chr19_GL949748v2_alt	69047	77107	chr19_GL949748v2_alt:69047-77107	1	-	70055	75196	0	6	1484,303,12,33,196,33,	0,2214,4946,5104,6112,8027,
#Deleted in new
chr19_GL949748v2_alt	69047	77107	chr19_GL949748v2_alt:69047-77107	3	-	70055	75196	0	5	1484,303,33,196,33,	0,2214,5104,6112,8027,
#Deleted in new
chr19_GL949748v2_alt	77272	81393	chr19_GL949748v2_alt:77272-81393	3	+	77299	81322	789624	4	37,75,78,163,	0,262,3081,3958,
#Deleted in new
chr19_GL949748v2_alt	81432	90168	chr19_GL949748v2_alt:81432-90168	3	-	81469	89762	789624	6	157,219,70,71,259,429,	0,1013,1313,3114,7502,8307,
#Deleted in new
chr19_GL949748v2_alt	89902	106263	chr19_GL949748v2_alt:89902-106263	1	+	92771	105866	0	13	388,185,61,84,98,107,170,158,90,128,73,314,413,	0,2861,3163,6449,7086,8043,8338,9088,11113,12658,12890,13642,15948,
#Deleted in new
chr19_GL949748v2_alt	89902	106263	chr19_GL949748v2_alt:89902-106263	3	+	92771	105976	0	14	388,185,61,84,98,107,170,158,90,128,73,129,99,413,	0,2861,3163,6449,7086,8043,8338,9088,11113,12658,12890,13642,13857,15948,
#Deleted in new
chr19_GL949748v2_alt	112548	130558	chr19_GL949748v2_alt:112548-130558	3	+	117827	130258	0	18	274,75,68,75,90,129,96,220,134,57,388,124,199,100,199,133,126,399,	0,5229,5419,5742,5960,6306,6537,7898,8210,8901,10447,10919,11859,14527,14729,15168,16016,17611,
#Deleted in new
chr19_GL949748v2_alt	116224	130531	chr19_GL949748v2_alt:116224-130531	1	+	117827	130258	0	17	1628,68,75,90,129,96,220,134,57,388,124,199,100,199,133,126,372,	0,1743,2066,2284,2630,2861,4222,4534,5225,6771,7243,8183,10851,11053,11492,12340,13935,
#Deleted in new
chr19_GL949748v2_alt	118853	130531	chr19_GL949748v2_alt:118853-130531	1	+	120506	128355	789624	14	130,96,276,134,57,388,124,199,100,199,133,213,344,372,	0,232,1537,1905,2596,4142,4614,5554,8222,8424,8863,9177,9493,11306,
#Deleted in new
chr19_GL949748v2_alt	130493	134559	chr19_GL949748v2_alt:130493-134559	3	-	130571	134546	789624	4	298,263,180,145,	0,1120,2639,3921,
#Deleted in new
chr19_GL949748v2_alt	135015	148058	chr19_GL949748v2_alt:135015-148058	3	-	135156	147926	789624	15	210,79,156,131,184,98,127,164,168,148,122,233,149,232,211,	0,302,713,965,1936,2504,2864,3554,4266,5251,7995,8272,9348,11737,12832,
#Deleted in new
chr19_GL949748v2_alt	148220	164847	chr19_GL949748v2_alt:148220-164847	1	-	148851	163298	789624	6	1019,177,361,160,130,545,	0,5375,7383,10297,14964,16082,
#Deleted in new
chr19_GL949748v2_alt	148220	164847	chr19_GL949748v2_alt:148220-164847	1	-	148851	163476	789624	8	1019,177,361,160,127,130,79,545,	0,5375,7383,10297,13936,14964,15180,16082,
#Deleted in new
chr19_GL949748v2_alt	148220	164847	chr19_GL949748v2_alt:148220-164847	3	-	148851	163298	789624	7	1019,177,361,160,130,79,545,	0,5375,7383,10297,14964,15180,16082,
#Deleted in new
chr19_GL949748v2_alt	165232	169508	chr19_GL949748v2_alt:165232-169508	1	+	166329	168331	789624	5	183,247,244,258,1365,	0,1093,1453,1848,2911,
#Deleted in new
chr19_GL949748v2_alt	165232	169508	chr19_GL949748v2_alt:165232-169508	3	+	165331	168640	789624	6	104,247,244,258,144,918,	0,1093,1453,1848,2911,3358,
#Deleted in new
chr19_GL949748v2_alt	165695	169508	chr19_GL949748v2_alt:165695-169508	1	+	166329	168331	789624	5	307,247,244,258,1365,	0,630,990,1385,2448,
#Deleted in new
chr19_GL949748v2_alt	175839	182627	chr19_GL949748v2_alt:175839-182627	3	+	176166	182557	789624	5	31,122,123,187,248,	0,302,629,5418,6540,
#Deleted in new
chr19_GL949748v2_alt	175839	181547	chr19_GL949748v2_alt:175839-181547	1	+	176166	181547	789624	5	31,122,123,187,13,	0,302,629,5418,5695,
#Deleted in new
chr19_GL949748v2_alt	721170	735540	chr19_GL949748v2_alt:721170-735540	3	+	721259	734914	789624	7	123,36,300,294,105,53,668,	0,915,3387,5205,12984,13551,13702,
#Deleted in new
chr19_GL949748v2_alt	721228	735537	chr19_GL949748v2_alt:721228-735537	1	+	721259	734914	789624	8	65,36,300,294,51,105,53,665,	0,857,3329,5147,8609,12926,13493,13644,
#Deleted in new
chr19_GL949748v2_alt	737427	751952	chr19_GL949748v2_alt:737427-751952	3	+	737441	751441	789624	8	48,36,300,294,51,102,53,688,	0,956,3428,5242,8806,13122,13686,13837,
#Deleted in new
chr19_GL949748v2_alt	737441	827990	chr19_GL949748v2_alt:737441-827990	3	+	737441	827990	789624	11	34,36,285,300,107,187,51,105,53,39,168,	0,942,18122,19857,21684,81950,85305,89621,90188,90339,90381,
#Deleted in new
chr19_GL949748v2_alt	753971	828009	chr19_GL949748v2_alt:753971-828009	1	+	753982	827990	789624	11	45,36,285,300,107,187,51,105,53,39,187,	0,798,1592,3327,5154,65420,68775,73091,73658,73809,73851,
#Deleted in new
chr19_GL949748v2_alt	753982	759419	chr19_GL949748v2_alt:753982-759419	7	+	753982	753982	16724991	5	33,36,285,300,294,	0,787,1581,3316,5143,
#Deleted in new
chr19_GL949748v2_alt	812588	828448	chr19_GL949748v2_alt:812588-828448	1	+	812643	827089	789624	8	89,36,300,272,51,105,53,668,	0,2369,4866,6718,10158,14474,15041,15192,
#Deleted in new
chr19_GL949748v2_alt	830290	839007	chr19_GL949748v2_alt:830290-839007	3	+	830353	839007	789624	6	97,36,285,300,294,51,	0,807,1585,3334,5206,8666,
#Deleted in new
chr19_GL949748v2_alt	886125	893057	chr19_GL949748v2_alt:886125-893057	1	+	886163	892857	0	6	72,36,279,48,51,382,	0,149,3096,3870,6028,6550,
#Deleted in new
chr19_GL949748v2_alt	886125	893057	chr19_GL949748v2_alt:886125-893057	1	+	886163	892857	0	6	72,36,285,279,48,382,	0,149,373,3096,3870,6550,
#Deleted in new
chr19_GL949748v2_alt	886125	893065	chr19_GL949748v2_alt:886125-893065	3	+	886163	892857	0	7	72,36,285,279,48,51,390,	0,149,373,3096,3870,6028,6550,
#Deleted in new
chr19_GL949748v2_alt	886163	892857	chr19_GL949748v2_alt:886163-892857	1	+	886163	892857	0	5	34,279,48,51,182,	0,3058,3832,5990,6512,
#Deleted in new
chr19_GL949748v2_alt	903494	927491	chr19_GL949748v2_alt:903494-927491	1	-	903725	921697	0	10	364,168,171,171,171,198,1579,75,316,37,	0,6990,10060,10980,12752,14535,15379,17422,17926,23960,
#Deleted in new
chr19_GL949748v2_alt	903494	927491	chr19_GL949748v2_alt:903494-927491	3	-	903725	921697	0	11	364,171,168,171,171,171,198,1579,75,316,37,	0,4096,6990,10060,10980,12752,14535,15379,17422,17926,23960,
#Deleted in new
chr19_GL949748v2_alt	945269	981126	chr19_GL949748v2_alt:945269-981126	3	+	950001	980884	789624	13	94,297,45,72,66,1567,171,165,171,171,171,171,381,	0,4715,9216,12468,16333,16878,19763,20867,24738,25218,28985,32033,35476,
#Deleted in new
chr19_GL949748v2_alt	946328	981126	chr19_GL949748v2_alt:946328-981126	1	+	950001	980884	789624	13	125,297,45,72,66,1567,171,165,171,171,171,171,381,	0,3656,8157,11409,15274,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949748v2_alt	946328	981126	chr19_GL949748v2_alt:946328-981126	1	+	950001	980884	789624	14	125,155,73,45,72,66,1567,171,165,171,171,171,171,381,	0,3656,3880,8157,11409,15274,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949748v2_alt	946328	981126	chr19_GL949748v2_alt:946328-981126	1	+	950001	980884	789624	12	125,297,45,72,1567,171,165,171,171,171,171,381,	0,3656,8157,11409,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949748v2_alt	993690	1018250	chr19_GL949748v2_alt:993690-1018250	1	-	994906	1018222	0	7	1461,51,60,285,258,33,62,	0,1978,4947,13873,18434,18801,24498,
#Deleted in new
chr19_GL949748v2_alt	993690	1018250	chr19_GL949748v2_alt:993690-1018250	3	-	994067	1018222	0	8	1461,55,60,54,285,258,33,62,	0,1974,4947,11513,13873,18434,18801,24498,
#Deleted in new
chr19_GL949748v2_alt	1024309	1043203	chr19_GL949748v2_alt:1024309-1043203	3	-	1025059	1036765	789624	7	986,102,213,105,156,119,250,	0,3063,4005,4335,12329,14833,18644,
#Deleted in new
chr19_GL949749v2_alt	15199	38320	chr19_GL949749v2_alt:15199-38320	1	-	15327	38144	789624	9	248,38,38,28,93,39,285,36,210,	0,946,1083,1336,1444,10577,17473,17864,22911,
#Deleted in new
chr19_GL949749v2_alt	15199	27563	chr19_GL949749v2_alt:15199-27563	1	-	15327	27563	789624	8	248,38,38,28,93,39,82,9,	0,946,1083,1336,1444,10577,12066,12355,
#Deleted in new
chr19_GL949749v2_alt	15199	38320	chr19_GL949749v2_alt:15199-38320	1	-	15327	38144	789624	8	248,38,38,28,39,285,36,210,	0,946,1083,1336,10577,17473,17864,22911,
#Deleted in new
chr19_GL949749v2_alt	15200	38320	chr19_GL949749v2_alt:15200-38320	1	-	15327	38144	789624	6	247,38,38,28,93,210,	0,945,1082,1335,1443,22910,
#Deleted in new
chr19_GL949749v2_alt	22732	38320	chr19_GL949749v2_alt:22732-38320	3	-	22732	38144	789624	5	38,39,285,36,210,	0,3044,9940,10331,15378,
#Deleted in new
chr19_GL949749v2_alt	44313	55747	chr19_GL949749v2_alt:44313-55747	3	-	44369	55722	789624	5	214,297,291,36,59,	0,3971,4875,5934,11375,
#Deleted in new
chr19_GL949749v2_alt	69047	77107	chr19_GL949749v2_alt:69047-77107	1	-	70055	75196	0	6	1484,303,12,33,196,33,	0,2214,4946,5104,6112,8027,
#Deleted in new
chr19_GL949749v2_alt	69047	77107	chr19_GL949749v2_alt:69047-77107	1	-	70055	75196	0	4	1484,303,196,33,	0,2214,6112,8027,
#Deleted in new
chr19_GL949749v2_alt	69047	77107	chr19_GL949749v2_alt:69047-77107	1	-	69598	75196	0	7	688,282,303,12,33,196,33,	0,1202,2214,4946,5104,6112,8027,
#Deleted in new
chr19_GL949749v2_alt	69047	75196	chr19_GL949749v2_alt:69047-75196	1	-	69598	75196	789624	6	688,282,304,14,33,37,	0,1202,2214,2520,5104,6112,
#Deleted in new
chr19_GL949749v2_alt	69047	77107	chr19_GL949749v2_alt:69047-77107	3	-	70055	75196	0	5	1484,303,33,196,33,	0,2214,5104,6112,8027,
#Deleted in new
chr19_GL949749v2_alt	77272	81393	chr19_GL949749v2_alt:77272-81393	3	+	77299	81322	789624	4	37,75,78,163,	0,262,3081,3958,
#Deleted in new
chr19_GL949749v2_alt	81432	90168	chr19_GL949749v2_alt:81432-90168	3	-	81469	89762	789624	6	157,219,70,71,259,429,	0,1013,1313,3114,7502,8307,
#Deleted in new
chr19_GL949749v2_alt	89902	106263	chr19_GL949749v2_alt:89902-106263	1	+	92771	105866	0	13	388,185,61,84,98,107,170,158,90,128,73,314,413,	0,2861,3163,6449,7086,8043,8338,9088,11113,12658,12890,13642,15948,
#Deleted in new
chr19_GL949749v2_alt	89902	106263	chr19_GL949749v2_alt:89902-106263	3	+	92771	105976	0	14	388,185,61,84,98,107,170,158,90,128,73,129,99,413,	0,2861,3163,6449,7086,8043,8338,9088,11113,12658,12890,13642,13857,15948,
#Deleted in new
chr19_GL949749v2_alt	112548	130558	chr19_GL949749v2_alt:112548-130558	3	+	117827	130258	0	18	274,75,68,75,90,129,96,220,134,57,388,124,199,100,199,133,126,399,	0,5229,5419,5742,5960,6306,6537,7898,8210,8901,10447,10919,11859,14527,14729,15168,16016,17611,
#Deleted in new
chr19_GL949749v2_alt	116224	130531	chr19_GL949749v2_alt:116224-130531	1	+	117827	130258	0	17	1628,68,75,90,129,96,220,134,57,388,124,199,100,199,133,126,372,	0,1743,2066,2284,2630,2861,4222,4534,5225,6771,7243,8183,10851,11053,11492,12340,13935,
#Deleted in new
chr19_GL949749v2_alt	118853	130531	chr19_GL949749v2_alt:118853-130531	1	+	120506	128355	789624	14	130,96,276,134,57,388,124,199,100,199,133,213,344,372,	0,232,1537,1905,2596,4142,4614,5554,8222,8424,8863,9177,9493,11306,
#Deleted in new
chr19_GL949749v2_alt	130493	134559	chr19_GL949749v2_alt:130493-134559	3	-	130571	134546	789624	4	298,263,180,145,	0,1120,2639,3921,
#Deleted in new
chr19_GL949749v2_alt	135015	148058	chr19_GL949749v2_alt:135015-148058	3	-	135156	147926	789624	15	210,79,156,131,184,98,127,164,168,148,122,233,149,232,211,	0,302,713,965,1936,2504,2864,3554,4266,5251,7995,8272,9348,11737,12832,
#Deleted in new
chr19_GL949749v2_alt	148220	164847	chr19_GL949749v2_alt:148220-164847	1	-	148851	163298	789624	6	1019,177,361,160,130,545,	0,5375,7383,10297,14964,16082,
#Deleted in new
chr19_GL949749v2_alt	148220	164847	chr19_GL949749v2_alt:148220-164847	1	-	148851	163476	789624	8	1019,177,361,160,127,130,79,545,	0,5375,7383,10297,13936,14964,15180,16082,
#Deleted in new
chr19_GL949749v2_alt	148220	164847	chr19_GL949749v2_alt:148220-164847	3	-	148851	163298	789624	7	1019,177,361,160,130,79,545,	0,5375,7383,10297,14964,15180,16082,
#Deleted in new
chr19_GL949749v2_alt	165232	169508	chr19_GL949749v2_alt:165232-169508	1	+	165331	168640	789624	6	104,247,244,258,144,918,	0,1093,1453,1848,2911,3358,
#Deleted in new
chr19_GL949749v2_alt	165232	169508	chr19_GL949749v2_alt:165232-169508	3	+	166329	168331	789624	5	183,247,244,258,1365,	0,1093,1453,1848,2911,
#Deleted in new
chr19_GL949749v2_alt	165695	169508	chr19_GL949749v2_alt:165695-169508	1	+	166329	168331	789624	5	307,247,244,258,1365,	0,630,990,1385,2448,
#Deleted in new
chr19_GL949749v2_alt	175839	182627	chr19_GL949749v2_alt:175839-182627	3	+	176166	182557	789624	5	31,122,123,187,248,	0,302,629,5418,6540,
#Deleted in new
chr19_GL949749v2_alt	175839	181547	chr19_GL949749v2_alt:175839-181547	1	+	176166	181547	789624	5	31,122,123,187,13,	0,302,629,5418,5695,
#Deleted in new
chr19_GL949749v2_alt	813263	825281	chr19_GL949749v2_alt:813263-825281	3	+	813281	824841	789624	8	52,36,285,300,294,105,53,566,	0,729,1535,3092,4974,10734,11301,11452,
#Deleted in new
chr19_GL949749v2_alt	827253	839993	chr19_GL949749v2_alt:827253-839993	3	+	827290	839484	789624	8	71,36,300,294,51,105,53,686,	0,998,3471,5286,8750,11336,11903,12054,
#Deleted in new
chr19_GL949749v2_alt	841920	847324	chr19_GL949749v2_alt:841920-847324	0	+	841920	841920	8553170	5	77,36,109,300,54,	0,1041,2473,3525,5350,
#Deleted in new
chr19_GL949749v2_alt	841923	856414	chr19_GL949749v2_alt:841923-856414	3	+	841963	855792	789624	8	74,36,300,294,51,105,53,664,	0,1038,3522,5347,8795,13109,13676,13827,
#Deleted in new
chr19_GL949749v2_alt	841933	856222	chr19_GL949749v2_alt:841933-856222	1	+	841963	855927	789624	9	64,36,300,294,51,105,53,39,430,	0,1028,3512,5337,8785,13099,13666,13817,13859,
#Deleted in new
chr19_GL949749v2_alt	858277	860146	chr19_GL949749v2_alt:858277-860146	3	+	858320	860146	789624	3	77,36,285,	0,806,1584,
#Deleted in new
chr19_GL949749v2_alt	913662	920602	chr19_GL949749v2_alt:913662-920602	1	+	913700	920394	0	7	72,36,285,279,48,51,390,	0,149,373,3096,3870,6028,6550,
#Deleted in new
chr19_GL949749v2_alt	913662	920594	chr19_GL949749v2_alt:913662-920594	3	+	913700	920394	0	6	72,36,285,279,48,382,	0,149,373,3096,3870,6550,
#Deleted in new
chr19_GL949749v2_alt	913662	920594	chr19_GL949749v2_alt:913662-920594	1	+	913700	920394	0	6	72,36,279,48,51,382,	0,149,3096,3870,6028,6550,
#Deleted in new
chr19_GL949749v2_alt	913700	920394	chr19_GL949749v2_alt:913700-920394	1	+	913700	920394	0	5	34,279,48,51,182,	0,3058,3832,5990,6512,
#Deleted in new
chr19_GL949749v2_alt	931031	955028	chr19_GL949749v2_alt:931031-955028	1	-	931262	949234	0	10	364,168,171,171,171,198,1579,75,316,37,	0,6990,10060,10980,12752,14535,15379,17422,17926,23960,
#Deleted in new
chr19_GL949749v2_alt	931031	955028	chr19_GL949749v2_alt:931031-955028	3	-	931262	949234	0	11	364,171,168,171,171,171,198,1579,75,316,37,	0,4096,6990,10060,10980,12752,14535,15379,17422,17926,23960,
#Deleted in new
chr19_GL949749v2_alt	972806	1008663	chr19_GL949749v2_alt:972806-1008663	3	+	977538	1008421	789624	13	94,297,45,72,66,1567,171,165,171,171,171,171,381,	0,4715,9216,12468,16333,16878,19763,20867,24738,25218,28985,32033,35476,
#Deleted in new
chr19_GL949749v2_alt	973865	1008663	chr19_GL949749v2_alt:973865-1008663	1	+	977538	1008421	789624	12	125,297,45,72,1567,171,165,171,171,171,171,381,	0,3656,8157,11409,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949749v2_alt	973865	1008663	chr19_GL949749v2_alt:973865-1008663	1	+	977538	1008421	789624	14	125,155,73,45,72,66,1567,171,165,171,171,171,171,381,	0,3656,3880,8157,11409,15274,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949749v2_alt	973865	1008663	chr19_GL949749v2_alt:973865-1008663	1	+	977538	1008421	789624	13	125,297,45,72,66,1567,171,165,171,171,171,171,381,	0,3656,8157,11409,15274,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949749v2_alt	1021227	1045787	chr19_GL949749v2_alt:1021227-1045787	1	-	1022443	1045759	0	7	1461,51,60,285,258,33,62,	0,1978,4947,13873,18434,18801,24498,
#Deleted in new
chr19_GL949749v2_alt	1021227	1045787	chr19_GL949749v2_alt:1021227-1045787	3	-	1021604	1045759	0	8	1461,55,60,54,285,258,33,62,	0,1974,4947,11513,13873,18434,18801,24498,
#Deleted in new
chr19_GL949749v2_alt	1051846	1070740	chr19_GL949749v2_alt:1051846-1070740	3	-	1052596	1064302	789624	7	986,102,213,105,156,119,250,	0,3063,4005,4335,12329,14833,18644,
#Deleted in new
chr19_GL949750v2_alt	15199	38320	chr19_GL949750v2_alt:15199-38320	1	-	15327	38144	789624	9	248,38,38,28,93,39,285,36,210,	0,946,1083,1336,1444,10577,17473,17864,22911,
#Deleted in new
chr19_GL949750v2_alt	15199	27563	chr19_GL949750v2_alt:15199-27563	1	-	15327	27563	789624	8	248,38,38,28,93,39,82,9,	0,946,1083,1336,1444,10577,12066,12355,
#Deleted in new
chr19_GL949750v2_alt	15199	38320	chr19_GL949750v2_alt:15199-38320	3	-	15327	38144	789624	8	248,38,38,28,39,285,36,210,	0,946,1083,1336,10577,17473,17864,22911,
#Deleted in new
chr19_GL949750v2_alt	15200	38320	chr19_GL949750v2_alt:15200-38320	1	-	15327	38144	789624	6	247,38,38,28,93,210,	0,945,1082,1335,1443,22910,
#Deleted in new
chr19_GL949750v2_alt	22732	38320	chr19_GL949750v2_alt:22732-38320	1	-	22732	38144	789624	5	38,39,285,36,210,	0,3044,9940,10331,15378,
#Deleted in new
chr19_GL949750v2_alt	44313	55747	chr19_GL949750v2_alt:44313-55747	3	-	44369	55722	789624	5	214,297,291,36,59,	0,3971,4875,5934,11375,
#Deleted in new
chr19_GL949750v2_alt	69047	77107	chr19_GL949750v2_alt:69047-77107	1	-	70055	75196	0	6	1484,303,12,33,196,33,	0,2214,4946,5104,6112,8027,
#Deleted in new
chr19_GL949750v2_alt	69047	77107	chr19_GL949750v2_alt:69047-77107	1	-	70055	75196	0	5	1484,303,33,196,33,	0,2214,5104,6112,8027,
#Deleted in new
chr19_GL949750v2_alt	69047	75196	chr19_GL949750v2_alt:69047-75196	1	-	69598	75196	789624	6	688,282,304,14,33,37,	0,1202,2214,2520,5104,6112,
#Deleted in new
chr19_GL949750v2_alt	69047	77107	chr19_GL949750v2_alt:69047-77107	1	-	70055	75196	0	4	1484,303,196,33,	0,2214,6112,8027,
#Deleted in new
chr19_GL949750v2_alt	69047	77107	chr19_GL949750v2_alt:69047-77107	3	-	69598	75196	0	7	688,282,303,12,33,196,33,	0,1202,2214,4946,5104,6112,8027,
#Deleted in new
chr19_GL949750v2_alt	77272	81393	chr19_GL949750v2_alt:77272-81393	3	+	77299	81322	789624	4	37,75,78,163,	0,262,3081,3958,
#Deleted in new
chr19_GL949750v2_alt	81432	90168	chr19_GL949750v2_alt:81432-90168	3	-	81469	89762	789624	6	157,219,70,71,259,429,	0,1013,1313,3114,7502,8307,
#Deleted in new
chr19_GL949750v2_alt	89902	106263	chr19_GL949750v2_alt:89902-106263	1	+	92771	105866	0	13	388,185,61,84,98,107,170,158,90,128,73,314,413,	0,2861,3163,6449,7086,8043,8338,9088,11113,12658,12890,13642,15948,
#Deleted in new
chr19_GL949750v2_alt	89902	106263	chr19_GL949750v2_alt:89902-106263	3	+	92771	105976	0	14	388,185,61,84,98,107,170,158,90,128,73,129,99,413,	0,2861,3163,6449,7086,8043,8338,9088,11113,12658,12890,13642,13857,15948,
#Deleted in new
chr19_GL949750v2_alt	112548	130558	chr19_GL949750v2_alt:112548-130558	3	+	117827	130258	0	18	274,75,68,75,90,129,96,220,134,57,388,124,199,100,199,133,126,399,	0,5229,5419,5742,5960,6306,6537,7898,8210,8901,10447,10919,11859,14527,14729,15168,16016,17611,
#Deleted in new
chr19_GL949750v2_alt	116224	130531	chr19_GL949750v2_alt:116224-130531	1	+	117827	130258	0	17	1628,68,75,90,129,96,220,134,57,388,124,199,100,199,133,126,372,	0,1743,2066,2284,2630,2861,4222,4534,5225,6771,7243,8183,10851,11053,11492,12340,13935,
#Deleted in new
chr19_GL949750v2_alt	118853	130531	chr19_GL949750v2_alt:118853-130531	1	+	120506	128355	789624	14	130,96,276,134,57,388,124,199,100,199,133,213,344,372,	0,232,1537,1905,2596,4142,4614,5554,8222,8424,8863,9177,9493,11306,
#Deleted in new
chr19_GL949750v2_alt	130493	134559	chr19_GL949750v2_alt:130493-134559	3	-	130571	134546	789624	4	298,263,180,145,	0,1120,2639,3921,
#Deleted in new
chr19_GL949750v2_alt	135015	148058	chr19_GL949750v2_alt:135015-148058	3	-	135156	147926	789624	15	210,79,156,131,184,98,127,164,168,148,122,233,149,232,211,	0,302,713,965,1936,2504,2864,3554,4266,5251,7995,8272,9348,11737,12832,
#Deleted in new
chr19_GL949750v2_alt	148220	164847	chr19_GL949750v2_alt:148220-164847	1	-	148851	163298	789624	6	1019,177,361,160,130,545,	0,5375,7383,10297,14964,16082,
#Deleted in new
chr19_GL949750v2_alt	148220	164847	chr19_GL949750v2_alt:148220-164847	1	-	148851	163298	789624	7	1019,177,361,160,130,79,545,	0,5375,7383,10297,14964,15180,16082,
#Deleted in new
chr19_GL949750v2_alt	148220	164847	chr19_GL949750v2_alt:148220-164847	3	-	148851	163476	789624	8	1019,177,361,160,127,130,79,545,	0,5375,7383,10297,13936,14964,15180,16082,
#Deleted in new
chr19_GL949750v2_alt	165232	169508	chr19_GL949750v2_alt:165232-169508	3	+	166329	168331	789624	5	183,247,244,258,1365,	0,1093,1453,1848,2911,
#Deleted in new
chr19_GL949750v2_alt	165232	169508	chr19_GL949750v2_alt:165232-169508	1	+	165331	168640	789624	6	104,247,244,258,144,918,	0,1093,1453,1848,2911,3358,
#Deleted in new
chr19_GL949750v2_alt	165695	169508	chr19_GL949750v2_alt:165695-169508	1	+	166329	168331	789624	5	307,247,244,258,1365,	0,630,990,1385,2448,
#Deleted in new
chr19_GL949750v2_alt	175839	182627	chr19_GL949750v2_alt:175839-182627	3	+	176166	182557	789624	5	31,122,123,187,248,	0,302,629,5418,6540,
#Deleted in new
chr19_GL949750v2_alt	175839	181547	chr19_GL949750v2_alt:175839-181547	1	+	176166	181547	789624	5	31,122,123,187,13,	0,302,629,5418,5695,
#Deleted in new
chr19_GL949750v2_alt	819632	830491	chr19_GL949750v2_alt:819632-830491	3	+	819632	829132	789624	6	166,272,51,105,53,668,	0,1718,5157,9473,10040,10191,
#Deleted in new
chr19_GL949750v2_alt	832360	849155	chr19_GL949750v2_alt:832360-849155	1	+	832393	848671	789624	8	67,36,285,300,294,105,53,694,	0,796,1574,3323,5198,15384,15949,16101,
#Deleted in new
chr19_GL949750v2_alt	832360	849155	chr19_GL949750v2_alt:832360-849155	3	+	832393	848671	789624	9	67,36,285,300,294,51,105,53,694,	0,796,1574,3323,5198,8657,15384,15949,16101,
#Deleted in new
chr19_GL949750v2_alt	850878	850985	chr19_GL949750v2_alt:850878-850985	3	-	850878	850878	8553170	1	107,	0,
#Deleted in new
chr19_GL949750v2_alt	888211	895151	chr19_GL949750v2_alt:888211-895151	3	+	888249	894943	0	7	72,36,285,279,48,51,390,	0,149,373,3096,3870,6028,6550,
#Deleted in new
chr19_GL949750v2_alt	888211	895143	chr19_GL949750v2_alt:888211-895143	1	+	888249	894943	0	6	72,36,279,48,51,382,	0,149,3096,3870,6028,6550,
#Deleted in new
chr19_GL949750v2_alt	888211	895143	chr19_GL949750v2_alt:888211-895143	1	+	888249	894943	0	6	72,36,285,279,48,382,	0,149,373,3096,3870,6550,
#Deleted in new
chr19_GL949750v2_alt	888249	894943	chr19_GL949750v2_alt:888249-894943	1	+	888249	894943	0	5	34,279,48,51,182,	0,3058,3832,5990,6512,
#Deleted in new
chr19_GL949750v2_alt	905580	929577	chr19_GL949750v2_alt:905580-929577	1	-	905811	923783	0	11	364,171,168,171,171,171,198,1579,75,316,37,	0,4096,6990,10060,10980,12752,14535,15379,17422,17926,23960,
#Deleted in new
chr19_GL949750v2_alt	905580	929577	chr19_GL949750v2_alt:905580-929577	3	-	905811	923783	0	10	364,168,171,171,171,198,1579,75,316,37,	0,6990,10060,10980,12752,14535,15379,17422,17926,23960,
#Deleted in new
chr19_GL949750v2_alt	947355	983212	chr19_GL949750v2_alt:947355-983212	3	+	952087	982970	789624	13	94,297,45,72,66,1567,171,165,171,171,171,171,381,	0,4715,9216,12468,16333,16878,19763,20867,24738,25218,28985,32033,35476,
#Deleted in new
chr19_GL949750v2_alt	948414	983212	chr19_GL949750v2_alt:948414-983212	1	+	952087	982970	789624	12	125,297,45,72,1567,171,165,171,171,171,171,381,	0,3656,8157,11409,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949750v2_alt	948414	983212	chr19_GL949750v2_alt:948414-983212	1	+	952087	982970	789624	13	125,297,45,72,66,1567,171,165,171,171,171,171,381,	0,3656,8157,11409,15274,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949750v2_alt	948414	983212	chr19_GL949750v2_alt:948414-983212	1	+	952087	982970	789624	14	125,155,73,45,72,66,1567,171,165,171,171,171,171,381,	0,3656,3880,8157,11409,15274,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949750v2_alt	995776	1020336	chr19_GL949750v2_alt:995776-1020336	1	-	996153	1020308	0	8	1461,55,60,54,285,258,33,62,	0,1974,4947,11513,13873,18434,18801,24498,
#Deleted in new
chr19_GL949750v2_alt	995776	1020336	chr19_GL949750v2_alt:995776-1020336	3	-	996992	1020308	0	7	1461,51,60,285,258,33,62,	0,1978,4947,13873,18434,18801,24498,
#Deleted in new
chr19_GL949750v2_alt	1026395	1045289	chr19_GL949750v2_alt:1026395-1045289	3	-	1027145	1038851	789624	7	986,102,213,105,156,119,250,	0,3063,4005,4335,12329,14833,18644,
#Deleted in new
chr19_GL949751v2_alt	15199	38320	chr19_GL949751v2_alt:15199-38320	1	-	15327	38144	789624	9	248,38,38,28,93,39,285,36,210,	0,946,1083,1336,1444,10577,17473,17864,22911,
#Deleted in new
chr19_GL949751v2_alt	15199	38320	chr19_GL949751v2_alt:15199-38320	3	-	15327	38144	789624	8	248,38,38,28,39,285,36,210,	0,946,1083,1336,10577,17473,17864,22911,
#Deleted in new
chr19_GL949751v2_alt	15199	27563	chr19_GL949751v2_alt:15199-27563	1	-	15327	27563	789624	8	248,38,38,28,93,39,82,9,	0,946,1083,1336,1444,10577,12066,12355,
#Deleted in new
chr19_GL949751v2_alt	15200	38320	chr19_GL949751v2_alt:15200-38320	1	-	15327	38144	789624	6	247,38,38,28,93,210,	0,945,1082,1335,1443,22910,
#Deleted in new
chr19_GL949751v2_alt	22732	38320	chr19_GL949751v2_alt:22732-38320	1	-	22732	38144	789624	5	38,39,285,36,210,	0,3044,9940,10331,15378,
#Deleted in new
chr19_GL949751v2_alt	44313	55747	chr19_GL949751v2_alt:44313-55747	3	-	44369	55722	789624	5	214,297,291,36,59,	0,3971,4875,5934,11375,
#Deleted in new
chr19_GL949751v2_alt	69047	77107	chr19_GL949751v2_alt:69047-77107	1	-	70055	75196	0	5	1484,303,33,196,33,	0,2214,5104,6112,8027,
#Deleted in new
chr19_GL949751v2_alt	69047	77107	chr19_GL949751v2_alt:69047-77107	1	-	70055	75196	0	4	1484,303,196,33,	0,2214,6112,8027,
#Deleted in new
chr19_GL949751v2_alt	69047	75196	chr19_GL949751v2_alt:69047-75196	1	-	69598	75196	789624	6	688,282,304,14,33,37,	0,1202,2214,2520,5104,6112,
#Deleted in new
chr19_GL949751v2_alt	69047	77107	chr19_GL949751v2_alt:69047-77107	1	-	70055	75196	0	6	1484,303,12,33,196,33,	0,2214,4946,5104,6112,8027,
#Deleted in new
chr19_GL949751v2_alt	69047	77107	chr19_GL949751v2_alt:69047-77107	3	-	69598	75196	0	7	688,282,303,12,33,196,33,	0,1202,2214,4946,5104,6112,8027,
#Deleted in new
chr19_GL949751v2_alt	77272	81393	chr19_GL949751v2_alt:77272-81393	3	+	77299	81322	789624	4	37,75,78,163,	0,262,3081,3958,
#Deleted in new
chr19_GL949751v2_alt	81432	90168	chr19_GL949751v2_alt:81432-90168	3	-	81469	89762	789624	6	157,219,70,71,259,429,	0,1013,1313,3114,7502,8307,
#Deleted in new
chr19_GL949751v2_alt	89902	106263	chr19_GL949751v2_alt:89902-106263	1	+	92771	105866	0	13	388,185,61,84,98,107,170,158,90,128,73,314,413,	0,2861,3163,6449,7086,8043,8338,9088,11113,12658,12890,13642,15948,
#Deleted in new
chr19_GL949751v2_alt	89902	106263	chr19_GL949751v2_alt:89902-106263	3	+	92771	105976	0	14	388,185,61,84,98,107,170,158,90,128,73,129,99,413,	0,2861,3163,6449,7086,8043,8338,9088,11113,12658,12890,13642,13857,15948,
#Deleted in new
chr19_GL949751v2_alt	112548	130558	chr19_GL949751v2_alt:112548-130558	3	+	117827	130258	0	18	274,75,68,75,90,129,96,220,134,57,388,124,199,100,199,133,126,399,	0,5229,5419,5742,5960,6306,6537,7898,8210,8901,10447,10919,11859,14527,14729,15168,16016,17611,
#Deleted in new
chr19_GL949751v2_alt	116224	130531	chr19_GL949751v2_alt:116224-130531	1	+	117827	130258	0	17	1628,68,75,90,129,96,220,134,57,388,124,199,100,199,133,126,372,	0,1743,2066,2284,2630,2861,4222,4534,5225,6771,7243,8183,10851,11053,11492,12340,13935,
#Deleted in new
chr19_GL949751v2_alt	118853	130531	chr19_GL949751v2_alt:118853-130531	1	+	120506	128355	789624	14	130,96,276,134,57,388,124,199,100,199,133,213,344,372,	0,232,1537,1905,2596,4142,4614,5554,8222,8424,8863,9177,9493,11306,
#Deleted in new
chr19_GL949751v2_alt	130493	134559	chr19_GL949751v2_alt:130493-134559	3	-	130571	134546	789624	4	298,263,180,145,	0,1120,2639,3921,
#Deleted in new
chr19_GL949751v2_alt	135015	148058	chr19_GL949751v2_alt:135015-148058	3	-	135156	147926	789624	15	210,79,156,131,184,98,127,164,168,148,122,233,149,232,211,	0,302,713,965,1936,2504,2864,3554,4266,5251,7995,8272,9348,11737,12832,
#Deleted in new
chr19_GL949751v2_alt	148220	164847	chr19_GL949751v2_alt:148220-164847	1	-	148851	163298	789624	7	1019,177,361,160,130,79,545,	0,5375,7383,10297,14964,15180,16082,
#Deleted in new
chr19_GL949751v2_alt	148220	164847	chr19_GL949751v2_alt:148220-164847	1	-	148851	163476	789624	8	1019,177,361,160,127,130,79,545,	0,5375,7383,10297,13936,14964,15180,16082,
#Deleted in new
chr19_GL949751v2_alt	148220	164847	chr19_GL949751v2_alt:148220-164847	3	-	148851	163298	789624	6	1019,177,361,160,130,545,	0,5375,7383,10297,14964,16082,
#Deleted in new
chr19_GL949751v2_alt	165232	169508	chr19_GL949751v2_alt:165232-169508	1	+	166329	168331	789624	5	183,247,244,258,1365,	0,1093,1453,1848,2911,
#Deleted in new
chr19_GL949751v2_alt	165232	169508	chr19_GL949751v2_alt:165232-169508	3	+	165331	168640	789624	6	104,247,244,258,144,918,	0,1093,1453,1848,2911,3358,
#Deleted in new
chr19_GL949751v2_alt	165695	169508	chr19_GL949751v2_alt:165695-169508	1	+	166329	168331	789624	5	307,247,244,258,1365,	0,630,990,1385,2448,
#Deleted in new
chr19_GL949751v2_alt	175839	182627	chr19_GL949751v2_alt:175839-182627	3	+	176166	182557	789624	5	31,122,123,187,248,	0,302,629,5418,6540,
#Deleted in new
chr19_GL949751v2_alt	175839	181547	chr19_GL949751v2_alt:175839-181547	1	+	176166	181547	789624	5	31,122,123,187,13,	0,302,629,5418,5695,
#Deleted in new
chr19_GL949751v2_alt	707374	718934	chr19_GL949751v2_alt:707374-718934	3	+	707374	718934	789624	8	34,36,285,300,294,105,53,126,	0,711,1517,3074,4956,10716,11283,11434,
#Deleted in new
chr19_GL949751v2_alt	721343	726686	chr19_GL949751v2_alt:721343-726686	0	+	721343	721343	8553170	5	74,36,107,300,54,	0,1001,2408,3474,5289,
#Deleted in new
chr19_GL949751v2_alt	721346	735888	chr19_GL949751v2_alt:721346-735888	3	+	721383	735355	0	8	71,36,300,294,51,105,53,686,	0,998,3471,5286,8824,13138,13705,13856,
#Deleted in new
chr19_GL949751v2_alt	737858	750207	chr19_GL949751v2_alt:737858-750207	7	+	737858	737858	16724991	8	34,36,299,294,51,109,53,177,	0,1091,3585,5409,8868,11454,12021,12172,
#Deleted in new
chr19_GL949751v2_alt	752643	758047	chr19_GL949751v2_alt:752643-758047	0	+	752643	752643	8553170	5	77,36,109,300,54,	0,1041,2473,3525,5350,
#Deleted in new
chr19_GL949751v2_alt	752646	766883	chr19_GL949751v2_alt:752646-766883	1	+	752686	766515	789624	8	74,36,300,294,51,105,53,410,	0,1038,3522,5347,8795,13109,13676,13827,
#Deleted in new
chr19_GL949751v2_alt	752656	766945	chr19_GL949751v2_alt:752656-766945	3	+	752686	766650	789624	9	64,36,300,294,51,105,53,39,430,	0,1028,3512,5337,8785,13099,13666,13817,13859,
#Deleted in new
chr19_GL949751v2_alt	768980	785805	chr19_GL949751v2_alt:768980-785805	3	+	769043	785321	789624	9	97,36,285,300,294,51,105,53,694,	0,826,1604,3353,5232,8690,15414,15979,16131,
#Deleted in new
chr19_GL949751v2_alt	769010	785805	chr19_GL949751v2_alt:769010-785805	1	+	769043	785321	789624	8	67,36,285,300,294,105,53,694,	0,796,1574,3323,5202,15384,15949,16101,
#Deleted in new
chr19_GL949751v2_alt	787528	787635	chr19_GL949751v2_alt:787528-787635	3	-	787528	787528	8553170	1	107,	0,
#Deleted in new
chr19_GL949751v2_alt	824504	831436	chr19_GL949751v2_alt:824504-831436	1	+	824542	831236	0	6	72,36,279,48,51,382,	0,149,3096,3870,6028,6550,
#Deleted in new
chr19_GL949751v2_alt	824504	831436	chr19_GL949751v2_alt:824504-831436	1	+	824542	831236	0	6	72,36,285,279,48,382,	0,149,373,3096,3870,6550,
#Deleted in new
chr19_GL949751v2_alt	824504	831444	chr19_GL949751v2_alt:824504-831444	1	+	824542	831236	0	7	72,36,285,279,48,51,390,	0,149,373,3096,3870,6028,6550,
#Deleted in new
chr19_GL949751v2_alt	824542	831236	chr19_GL949751v2_alt:824542-831236	3	+	824542	831236	0	5	34,279,48,51,182,	0,3058,3832,5990,6512,
#Deleted in new
chr19_GL949751v2_alt	841873	865870	chr19_GL949751v2_alt:841873-865870	1	-	842104	860076	0	10	364,168,171,171,171,198,1579,75,316,37,	0,6990,10060,10980,12752,14535,15379,17422,17926,23960,
#Deleted in new
chr19_GL949751v2_alt	841873	865870	chr19_GL949751v2_alt:841873-865870	3	-	842104	860076	0	11	364,171,168,171,171,171,198,1579,75,316,37,	0,4096,6990,10060,10980,12752,14535,15379,17422,17926,23960,
#Deleted in new
chr19_GL949751v2_alt	883648	919505	chr19_GL949751v2_alt:883648-919505	3	+	888380	919263	789624	13	94,297,45,72,66,1567,171,165,171,171,171,171,381,	0,4715,9216,12468,16333,16878,19763,20867,24738,25218,28985,32033,35476,
#Deleted in new
chr19_GL949751v2_alt	884707	919505	chr19_GL949751v2_alt:884707-919505	1	+	888380	919263	789624	14	125,155,73,45,72,66,1567,171,165,171,171,171,171,381,	0,3656,3880,8157,11409,15274,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949751v2_alt	884707	919505	chr19_GL949751v2_alt:884707-919505	1	+	888380	919263	789624	12	125,297,45,72,1567,171,165,171,171,171,171,381,	0,3656,8157,11409,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949751v2_alt	884707	919505	chr19_GL949751v2_alt:884707-919505	1	+	888380	919263	789624	13	125,297,45,72,66,1567,171,165,171,171,171,171,381,	0,3656,8157,11409,15274,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949751v2_alt	932069	956629	chr19_GL949751v2_alt:932069-956629	1	-	933285	956601	0	7	1461,51,60,285,258,33,62,	0,1978,4947,13873,18434,18801,24498,
#Deleted in new
chr19_GL949751v2_alt	932069	956629	chr19_GL949751v2_alt:932069-956629	3	-	932446	956601	0	8	1461,55,60,54,285,258,33,62,	0,1974,4947,11513,13873,18434,18801,24498,
#Deleted in new
chr19_GL949751v2_alt	962688	981582	chr19_GL949751v2_alt:962688-981582	3	-	963438	975144	789624	7	986,102,213,105,156,119,250,	0,3063,4005,4335,12329,14833,18644,
#Deleted in new
chr19_GL949752v1_alt	15199	38320	chr19_GL949752v1_alt:15199-38320	1	-	15327	38144	789624	9	248,38,38,28,93,39,285,36,210,	0,946,1083,1336,1444,10577,17473,17864,22911,
#Deleted in new
chr19_GL949752v1_alt	15199	27563	chr19_GL949752v1_alt:15199-27563	1	-	15327	27563	789624	8	248,38,38,28,93,39,82,9,	0,946,1083,1336,1444,10577,12066,12355,
#Deleted in new
chr19_GL949752v1_alt	15199	38320	chr19_GL949752v1_alt:15199-38320	3	-	15327	38144	789624	8	248,38,38,28,39,285,36,210,	0,946,1083,1336,10577,17473,17864,22911,
#Deleted in new
chr19_GL949752v1_alt	15200	38320	chr19_GL949752v1_alt:15200-38320	1	-	15327	38144	789624	6	247,38,38,28,93,210,	0,945,1082,1335,1443,22910,
#Deleted in new
chr19_GL949752v1_alt	22732	38320	chr19_GL949752v1_alt:22732-38320	1	-	22732	38144	789624	5	38,39,285,36,210,	0,3044,9940,10331,15378,
#Deleted in new
chr19_GL949752v1_alt	44313	55747	chr19_GL949752v1_alt:44313-55747	3	-	44369	55722	789624	5	214,297,291,36,59,	0,3971,4875,5934,11375,
#Deleted in new
chr19_GL949752v1_alt	69047	77107	chr19_GL949752v1_alt:69047-77107	1	-	70055	75196	0	4	1484,303,196,33,	0,2214,6112,8027,
#Deleted in new
chr19_GL949752v1_alt	69047	77107	chr19_GL949752v1_alt:69047-77107	1	-	70055	75196	0	5	1484,303,33,196,33,	0,2214,5104,6112,8027,
#Deleted in new
chr19_GL949752v1_alt	69047	77107	chr19_GL949752v1_alt:69047-77107	1	-	70055	75196	0	6	1484,303,12,33,196,33,	0,2214,4946,5104,6112,8027,
#Deleted in new
chr19_GL949752v1_alt	69047	75196	chr19_GL949752v1_alt:69047-75196	1	-	69598	75196	789624	6	688,282,304,14,33,37,	0,1202,2214,2520,5104,6112,
#Deleted in new
chr19_GL949752v1_alt	69047	77107	chr19_GL949752v1_alt:69047-77107	3	-	69598	75196	0	7	688,282,303,12,33,196,33,	0,1202,2214,4946,5104,6112,8027,
#Deleted in new
chr19_GL949752v1_alt	77272	81393	chr19_GL949752v1_alt:77272-81393	3	+	77299	81322	789624	4	37,75,78,163,	0,262,3081,3958,
#Deleted in new
chr19_GL949752v1_alt	81432	90168	chr19_GL949752v1_alt:81432-90168	3	-	81469	89762	789624	6	157,219,70,71,259,429,	0,1013,1313,3114,7502,8307,
#Deleted in new
chr19_GL949752v1_alt	89902	106263	chr19_GL949752v1_alt:89902-106263	1	+	92771	105976	0	14	388,185,61,84,98,107,170,158,90,128,73,129,99,413,	0,2861,3163,6449,7086,8043,8338,9088,11113,12658,12890,13642,13857,15948,
#Deleted in new
chr19_GL949752v1_alt	89902	106263	chr19_GL949752v1_alt:89902-106263	3	+	92771	105866	0	13	388,185,61,84,98,107,170,158,90,128,73,314,413,	0,2861,3163,6449,7086,8043,8338,9088,11113,12658,12890,13642,15948,
#Deleted in new
chr19_GL949752v1_alt	112548	130558	chr19_GL949752v1_alt:112548-130558	3	+	117827	130258	0	18	274,75,68,75,90,129,96,220,134,57,388,124,199,100,199,133,126,399,	0,5229,5419,5742,5960,6306,6537,7898,8210,8901,10447,10919,11859,14527,14729,15168,16016,17611,
#Deleted in new
chr19_GL949752v1_alt	116224	130531	chr19_GL949752v1_alt:116224-130531	1	+	117827	130258	0	17	1628,68,75,90,129,96,220,134,57,388,124,199,100,199,133,126,372,	0,1743,2066,2284,2630,2861,4222,4534,5225,6771,7243,8183,10851,11053,11492,12340,13935,
#Deleted in new
chr19_GL949752v1_alt	118853	130531	chr19_GL949752v1_alt:118853-130531	1	+	120506	128355	789624	14	130,96,276,134,57,388,124,199,100,199,133,213,344,372,	0,232,1537,1905,2596,4142,4614,5554,8222,8424,8863,9177,9493,11306,
#Deleted in new
chr19_GL949752v1_alt	127792	130531	chr19_GL949752v1_alt:127792-130531	0	+	127792	127792	8553170	2	57,1967,	0,772,
#Deleted in new
chr19_GL949752v1_alt	127792	129305	chr19_GL949752v1_alt:127792-129305	0	+	127792	128901	789624	3	57,126,512,	0,772,1001,
#Deleted in new
chr19_GL949752v1_alt	127792	130531	chr19_GL949752v1_alt:127792-130531	0	+	127792	130258	789624	3	57,126,372,	0,772,2367,
#Deleted in new
chr19_GL949752v1_alt	127792	130532	chr19_GL949752v1_alt:127792-130532	0	+	127792	127792	8553170	4	57,213,344,373,	0,238,554,2367,
#Deleted in new
chr19_GL949752v1_alt	127852	130532	chr19_GL949752v1_alt:127852-130532	0	+	127852	127852	8553170	2	80,1968,	0,712,
#Deleted in new
chr19_GL949752v1_alt	128573	130532	chr19_GL949752v1_alt:128573-130532	0	+	128573	128573	8553170	2	117,424,	0,1535,
#Deleted in new
chr19_GL949752v1_alt	130473	134594	chr19_GL949752v1_alt:130473-134594	3	-	130571	134546	789624	4	318,263,180,180,	0,1140,2659,3941,
#Deleted in new
chr19_GL949752v1_alt	134958	139568	chr19_GL949752v1_alt:134958-139568	0	-	134958	134958	8553170	9	267,79,156,131,184,98,127,235,283,	0,359,770,1022,1994,2566,2926,3545,4327,
#Deleted in new
chr19_GL949752v1_alt	134958	147950	chr19_GL949752v1_alt:134958-147950	1	-	135156	147895	789624	15	267,79,156,131,184,98,127,164,168,148,122,233,149,214,134,	0,359,770,1022,1994,2566,2926,3616,4327,5312,8064,8341,9375,11726,12858,
#Deleted in new
chr19_GL949752v1_alt	134958	135823	chr19_GL949752v1_alt:134958-135823	0	-	134958	134958	8553170	3	267,144,95,	0,359,770,
#Deleted in new
chr19_GL949752v1_alt	134981	135500	chr19_GL949752v1_alt:134981-135500	0	-	134981	134981	8553170	2	244,183,	0,336,
#Deleted in new
chr19_GL949752v1_alt	135015	148028	chr19_GL949752v1_alt:135015-148028	3	-	135156	147895	789624	15	210,79,156,131,184,98,127,164,168,148,122,233,149,232,212,	0,302,713,965,1937,2509,2869,3559,4270,5255,8007,8284,9318,11669,12801,
#Deleted in new
chr19_GL949752v1_alt	136188	138332	chr19_GL949752v1_alt:136188-138332	0	-	136188	136188	8553170	2	1434,448,	0,1696,
#Deleted in new
chr19_GL949752v1_alt	137076	138119	chr19_GL949752v1_alt:137076-138119	0	-	137076	137076	8553170	3	60,98,235,	0,448,808,
#Deleted in new
chr19_GL949752v1_alt	139403	143334	chr19_GL949752v1_alt:139403-143334	0	-	139403	139403	8553170	3	50,148,312,	0,867,3619,
#Deleted in new
chr19_GL949752v1_alt	143015	147530	chr19_GL949752v1_alt:143015-147530	0	-	143015	143015	8553170	5	129,233,149,214,39,	0,284,1318,3669,4476,
#Deleted in new
chr19_GL949752v1_alt	148190	164846	chr19_GL949752v1_alt:148190-164846	1	-	148821	163294	789624	6	1019,177,361,160,130,545,	0,5368,7376,10290,14990,16111,
#Deleted in new
chr19_GL949752v1_alt	148192	164407	chr19_GL949752v1_alt:148192-164407	0	-	148192	148192	8553170	7	1017,177,361,160,130,79,106,	0,5366,7374,10288,14988,15204,16109,
#Deleted in new
chr19_GL949752v1_alt	148192	164846	chr19_GL949752v1_alt:148192-164846	1	-	148821	163472	789624	8	1017,177,361,160,127,130,79,545,	0,5366,7374,10288,13928,14988,15204,16109,
#Deleted in new
chr19_GL949752v1_alt	148196	155584	chr19_GL949752v1_alt:148196-155584	0	-	148196	148196	8553170	2	1013,2026,	0,5362,
#Deleted in new
chr19_GL949752v1_alt	148832	155931	chr19_GL949752v1_alt:148832-155931	0	-	148832	148832	8553170	3	377,177,365,	0,4726,6734,
#Deleted in new
chr19_GL949752v1_alt	153130	164636	chr19_GL949752v1_alt:153130-164636	3	-	153554	163472	789624	7	605,361,160,127,130,79,335,	0,2436,5350,8990,10050,10266,11171,
#Deleted in new
chr19_GL949752v1_alt	155118	158594	chr19_GL949752v1_alt:155118-158594	0	-	155118	155118	8553170	2	809,114,	0,3362,
#Deleted in new
chr19_GL949752v1_alt	155652	164294	chr19_GL949752v1_alt:155652-164294	0	-	155652	163472	789624	6	275,160,127,130,79,140,	0,2828,6468,7528,7744,8502,
#Deleted in new
chr19_GL949752v1_alt	155810	163376	chr19_GL949752v1_alt:155810-163376	0	-	155810	155810	8553170	4	117,160,127,196,	0,2670,6310,7370,
#Deleted in new
chr19_GL949752v1_alt	155902	164308	chr19_GL949752v1_alt:155902-164308	0	-	155902	163472	789624	6	25,160,127,130,79,43,	0,2578,6218,7278,7494,8363,
#Deleted in new
chr19_GL949752v1_alt	161915	163478	chr19_GL949752v1_alt:161915-163478	0	-	161915	161915	8553170	3	332,130,82,	0,1265,1481,
#Deleted in new
chr19_GL949752v1_alt	162245	164533	chr19_GL949752v1_alt:162245-164533	0	-	162245	162245	8553170	4	24,130,79,232,	0,935,1151,2056,
#Deleted in new
chr19_GL949752v1_alt	163204	164751	chr19_GL949752v1_alt:163204-164751	0	-	163204	163204	8553170	2	106,450,	0,1097,
#Deleted in new
chr19_GL949752v1_alt	164901	167319	chr19_GL949752v1_alt:164901-167319	0	+	166328	167319	789624	4	225,247,244,240,	0,1423,1783,2178,
#Deleted in new
chr19_GL949752v1_alt	165231	168629	chr19_GL949752v1_alt:165231-168629	1	+	166328	168325	789624	5	183,247,244,258,492,	0,1093,1453,1848,2906,
#Deleted in new
chr19_GL949752v1_alt	165231	169499	chr19_GL949752v1_alt:165231-169499	3	+	165330	168634	789624	6	104,247,244,258,144,915,	0,1093,1453,1848,2906,3353,
#Deleted in new
chr19_GL949752v1_alt	165232	167341	chr19_GL949752v1_alt:165232-167341	0	+	165330	167341	789624	4	103,247,244,262,	0,1092,1452,1847,
#Deleted in new
chr19_GL949752v1_alt	165307	168629	chr19_GL949752v1_alt:165307-168629	0	+	165307	165307	8553170	3	1621,258,492,	0,1772,2830,
#Deleted in new
chr19_GL949752v1_alt	165694	168629	chr19_GL949752v1_alt:165694-168629	1	+	166328	168325	789624	5	307,247,244,258,492,	0,630,990,1385,2443,
#Deleted in new
chr19_GL949752v1_alt	166216	168628	chr19_GL949752v1_alt:166216-168628	1	+	166328	168325	789624	4	355,244,258,491,	0,468,863,1921,
#Deleted in new
chr19_GL949752v1_alt	175790	181923	chr19_GL949752v1_alt:175790-181923	0	+	175790	175790	8553170	4	70,122,123,677,	0,341,668,5456,
#Deleted in new
chr19_GL949752v1_alt	175794	176871	chr19_GL949752v1_alt:175794-176871	0	+	175794	175794	8553170	3	66,122,413,	0,337,664,
#Deleted in new
chr19_GL949752v1_alt	175825	182618	chr19_GL949752v1_alt:175825-182618	0	+	175825	175825	8553170	5	35,122,38,128,250,	0,306,633,5480,6543,
#Deleted in new
chr19_GL949752v1_alt	175829	223971	chr19_GL949752v1_alt:175829-223971	0	+	175829	175829	8553170	5	31,122,123,196,1912,	0,302,629,30900,46230,
#Deleted in new
chr19_GL949752v1_alt	175829	182616	chr19_GL949752v1_alt:175829-182616	1	+	176156	182546	0	5	31,122,123,187,248,	0,302,629,5417,6539,
#Deleted in new
chr19_GL949752v1_alt	175829	181536	chr19_GL949752v1_alt:175829-181536	1	+	176156	181536	789624	5	31,122,123,187,13,	0,302,629,5417,5694,
#Deleted in new
chr19_GL949752v1_alt	175843	182618	chr19_GL949752v1_alt:175843-182618	1	+	176156	182546	0	5	90,122,123,187,250,	0,288,615,5403,6525,
#Deleted in new
chr19_GL949752v1_alt	175846	181802	chr19_GL949752v1_alt:175846-181802	0	+	175846	175846	8553170	5	87,122,123,187,279,	0,285,612,5400,5677,
#Deleted in new
chr19_GL949752v1_alt	176104	182618	chr19_GL949752v1_alt:176104-182618	1	+	176156	182546	0	4	149,123,187,250,	0,354,5142,6264,
#Deleted in new
chr19_GL949752v1_alt	176113	182618	chr19_GL949752v1_alt:176113-182618	0	+	176113	176113	789624	5	140,123,187,172,250,	0,345,5133,5410,6255,
#Deleted in new
chr19_GL949752v1_alt	176129	176980	chr19_GL949752v1_alt:176129-176980	0	+	176129	176129	8553170	2	124,522,	0,329,
#Deleted in new
chr19_GL949752v1_alt	176129	182618	chr19_GL949752v1_alt:176129-182618	2	+	176129	176129	8553170	3	124,123,1372,	0,329,5117,
#Deleted in new
chr19_GL949752v1_alt	176129	182618	chr19_GL949752v1_alt:176129-182618	0	+	176129	176129	8553170	4	124,123,449,250,	0,329,5117,6239,
#Deleted in new
chr19_GL949752v1_alt	176129	182622	chr19_GL949752v1_alt:176129-182622	0	+	176129	176129	8553170	4	124,123,187,1099,	0,329,5117,5394,
#Deleted in new
chr19_GL949752v1_alt	180904	182454	chr19_GL949752v1_alt:180904-182454	0	+	180904	180904	8553170	3	529,172,86,	0,619,1464,
#Deleted in new
chr19_GL949752v1_alt	191659	197968	chr19_GL949752v1_alt:191659-197968	0	-	196772	197966	789624	14	566,159,53,38,76,117,51,303,297,169,217,285,36,36,	0,645,1687,1971,2089,2455,3483,3856,4413,4948,5244,5608,6077,6273,
#Deleted in new
chr19_GL949752v1_alt	191677	198156	chr19_GL949752v1_alt:191677-198156	3	-	192078	197966	789624	13	548,156,53,38,76,117,51,303,297,303,285,36,224,	0,627,1669,1953,2071,2437,3465,3838,4395,5140,5590,6059,6255,
#Deleted in new
chr19_GL949752v1_alt	191853	197968	chr19_GL949752v1_alt:191853-197968	1	-	192078	197966	789624	13	372,159,53,38,76,117,51,303,297,303,285,36,36,	0,451,1493,1777,1895,2261,3289,3662,4219,4964,5414,5883,6079,
#Deleted in new
chr19_GL949752v1_alt	191853	197968	chr19_GL949752v1_alt:191853-197968	0	-	193808	197966	789624	13	372,159,53,38,104,117,51,303,297,303,285,36,36,	0,451,1493,1777,1895,2261,3289,3662,4219,4964,5414,5883,6079,
#Deleted in new
chr19_GL949752v1_alt	191913	197968	chr19_GL949752v1_alt:191913-197968	1	-	192078	197966	789624	14	312,159,53,38,76,117,51,51,303,297,303,285,36,36,	0,391,1433,1717,1835,2201,2941,3229,3602,4159,4904,5354,5823,6019,
#Deleted in new
chr19_GL949752v1_alt	191913	197968	chr19_GL949752v1_alt:191913-197968	0	-	191913	191913	8553170	12	312,156,38,76,117,51,303,297,217,285,36,36,	0,391,1717,1835,2201,3229,3602,4159,4990,5354,5823,6019,
#Deleted in new
chr19_GL949752v1_alt	193580	194341	chr19_GL949752v1_alt:193580-194341	0	-	193580	193580	8553170	3	88,76,227,	0,168,534,
#Deleted in new
chr19_GL949752v1_alt	196279	198077	chr19_GL949752v1_alt:196279-198077	0	-	196279	196279	8553170	4	90,303,285,341,	0,538,988,1457,
#Deleted in new
chr19_GL949752v1_alt	203971	205346	chr19_GL949752v1_alt:203971-205346	7	+	203971	203971	16724991	1	1375,	0,
#Deleted in new
chr19_GL949752v1_alt	213474	217730	chr19_GL949752v1_alt:213474-217730	0	-	216106	217713	789624	9	128,268,51,303,297,217,285,36,51,	0,336,1415,1788,2345,3176,3540,4009,4205,
#Deleted in new
chr19_GL949752v1_alt	213917	217757	chr19_GL949752v1_alt:213917-217757	1	-	213941	217713	789624	7	161,51,303,303,285,36,78,	0,972,1345,2647,3097,3566,3762,
#Deleted in new
chr19_GL949752v1_alt	213941	217824	chr19_GL949752v1_alt:213941-217824	3	-	213941	217713	789624	8	137,51,303,297,303,285,36,145,	0,948,1321,1878,2623,3073,3542,3738,
#Deleted in new
chr19_GL949752v1_alt	225392	232260	chr19_GL949752v1_alt:225392-232260	0	-	225392	225392	8553170	12	745,53,38,64,1198,51,303,297,300,169,36,133,	0,1629,1941,2061,2446,3940,4310,4861,5618,6064,6536,6735,
#Deleted in new
chr19_GL949752v1_alt	225434	232230	chr19_GL949752v1_alt:225434-232230	1	-	225753	232161	789624	12	466,53,38,64,117,51,51,303,297,285,36,103,	0,1587,1899,2019,2404,3551,3898,4268,4819,6022,6494,6693,
#Deleted in new
chr19_GL949752v1_alt	225436	232260	chr19_GL949752v1_alt:225436-232260	3	-	225753	232161	789624	13	464,53,38,64,117,48,51,303,297,300,285,36,133,	0,1585,1897,2017,2402,3549,3896,4266,4817,5574,6020,6492,6691,
#Deleted in new
chr19_GL949752v1_alt	225463	232232	chr19_GL949752v1_alt:225463-232232	1	-	225753	232161	789624	13	437,53,38,64,117,51,51,303,297,300,285,36,105,	0,1558,1870,1990,2375,3522,3869,4239,4790,5547,5993,6465,6664,
#Deleted in new
chr19_GL949752v1_alt	225513	232213	chr19_GL949752v1_alt:225513-232213	0	-	225513	225513	8553170	3	4492,297,757,	0,4740,5943,
#Deleted in new
chr19_GL949752v1_alt	225522	232242	chr19_GL949752v1_alt:225522-232242	0	-	225522	225522	8553170	9	612,53,38,64,1195,452,164,36,115,	0,1499,1811,1931,2316,3810,6055,6406,6605,
#Deleted in new
chr19_GL949752v1_alt	225550	232230	chr19_GL949752v1_alt:225550-232230	1	-	225753	232161	789624	14	350,159,53,38,64,117,48,51,303,297,300,285,36,103,	0,428,1471,1783,1903,2288,3435,3782,4152,4703,5460,5906,6378,6577,
#Deleted in new
chr19_GL949752v1_alt	226732	227956	chr19_GL949752v1_alt:226732-227956	0	-	226732	226732	8553170	5	196,53,38,64,118,	0,289,601,721,1106,
#Deleted in new
chr19_GL949752v1_alt	229179	230304	chr19_GL949752v1_alt:229179-230304	0	-	229179	229179	8553170	3	204,303,51,	0,523,1074,
#Deleted in new
chr19_GL949752v1_alt	230474	232253	chr19_GL949752v1_alt:230474-232253	0	-	230474	230474	8553170	5	76,56,285,36,126,	0,536,982,1454,1653,
#Deleted in new
chr19_GL949752v1_alt	230522	232178	chr19_GL949752v1_alt:230522-232178	0	-	230522	230522	8553170	3	28,285,250,	0,934,1406,
#Deleted in new
chr19_GL949752v1_alt	231122	232239	chr19_GL949752v1_alt:231122-232239	0	-	231122	231122	8553170	3	188,285,311,	0,334,806,
#Deleted in new
chr19_GL949752v1_alt	231189	232577	chr19_GL949752v1_alt:231189-232577	0	-	231189	232161	789624	5	121,285,36,85,133,	0,267,739,938,1255,
#Deleted in new
chr19_GL949752v1_alt	238932	239035	chr19_GL949752v1_alt:238932-239035	3	-	238932	238932	8553170	1	103,	0,
#Deleted in new
chr19_GL949752v1_alt	242985	244029	chr19_GL949752v1_alt:242985-244029	7	+	242985	242985	16724991	1	1044,	0,
#Deleted in new
chr19_GL949752v1_alt	248804	253362	chr19_GL949752v1_alt:248804-253362	0	-	249664	253362	789624	8	1007,53,38,76,123,48,51,121,	0,2128,2441,2558,2984,3727,4066,4437,
#Deleted in new
chr19_GL949752v1_alt	249333	253362	chr19_GL949752v1_alt:249333-253362	2	-	249664	253362	789624	8	478,53,38,76,123,48,51,121,	0,1599,1912,2029,2455,3198,3537,3908,
#Deleted in new
chr19_GL949752v1_alt	249407	253362	chr19_GL949752v1_alt:249407-253362	1	-	249664	253362	789624	8	404,53,38,76,123,51,51,121,	0,1525,1838,1955,2381,3124,3463,3834,
#Deleted in new
chr19_GL949752v1_alt	249420	253362	chr19_GL949752v1_alt:249420-253362	0	-	249420	249420	8553170	7	391,53,38,76,794,51,121,	0,1512,1825,1942,2368,3450,3821,
#Deleted in new
chr19_GL949752v1_alt	249432	253362	chr19_GL949752v1_alt:249432-253362	0	-	249432	249432	8553170	8	379,53,38,76,173,48,51,121,	0,1500,1813,1930,2356,3099,3438,3809,
#Deleted in new
chr19_GL949752v1_alt	249477	253362	chr19_GL949752v1_alt:249477-253362	0	-	249477	249477	8553170	8	334,53,55,76,123,51,51,121,	0,1455,1751,1885,2311,3054,3393,3764,
#Deleted in new
chr19_GL949752v1_alt	250874	251525	chr19_GL949752v1_alt:250874-251525	0	-	250874	250874	8553170	2	409,163,	0,488,
#Deleted in new
chr19_GL949752v1_alt	250925	252181	chr19_GL949752v1_alt:250925-252181	0	-	250925	250925	8553170	4	60,38,76,393,	0,320,437,863,
#Deleted in new
chr19_GL949752v1_alt	258362	260662	chr19_GL949752v1_alt:258362-260662	0	-	258362	258362	8553170	2	1702,59,	0,2241,
#Deleted in new
chr19_GL949752v1_alt	258402	275209	chr19_GL949752v1_alt:258402-275209	3	-	259917	274928	789624	9	1662,53,38,43,129,39,51,294,297,	0,2201,2477,2603,2738,3175,6267,7161,16510,
#Deleted in new
chr19_GL949752v1_alt	259173	269571	chr19_GL949752v1_alt:259173-269571	1	-	259917	269453	0	10	891,53,38,43,129,39,51,294,36,152,	0,1430,1706,1832,1967,2404,5496,6390,9770,10246,
#Deleted in new
chr19_GL949752v1_alt	259325	261997	chr19_GL949752v1_alt:259325-261997	0	-	259325	259325	8553170	5	739,53,38,43,857,	0,1278,1554,1680,1815,
#Deleted in new
chr19_GL949752v1_alt	259326	269514	chr19_GL949752v1_alt:259326-269514	1	-	259917	269453	0	9	738,53,38,43,129,39,294,36,95,	0,1277,1553,1679,1814,2251,6237,9617,10093,
#Deleted in new
chr19_GL949752v1_alt	259360	269644	chr19_GL949752v1_alt:259360-269644	1	-	259917	269453	789624	10	704,53,38,43,129,39,51,291,36,225,	0,1243,1519,1645,1780,2217,5309,6203,9583,10059,
#Deleted in new
chr19_GL949752v1_alt	259585	260707	chr19_GL949752v1_alt:259585-260707	0	-	259585	259585	8553170	2	479,104,	0,1018,
#Deleted in new
chr19_GL949752v1_alt	259778	261526	chr19_GL949752v1_alt:259778-261526	0	-	259778	259778	8553170	5	286,53,38,43,386,	0,825,1101,1227,1362,
#Deleted in new
chr19_GL949752v1_alt	259791	269533	chr19_GL949752v1_alt:259791-269533	0	-	259791	259791	8553170	7	273,53,390,39,294,36,114,	0,812,1088,1786,5772,9152,9628,
#Deleted in new
chr19_GL949752v1_alt	259815	261401	chr19_GL949752v1_alt:259815-261401	0	-	259815	259815	8553170	6	249,53,38,43,129,40,	0,788,1064,1190,1325,1546,
#Deleted in new
chr19_GL949752v1_alt	259850	265841	chr19_GL949752v1_alt:259850-265841	0	-	259850	259850	8553170	7	214,53,169,129,39,51,184,	0,753,1029,1290,1727,4819,5807,
#Deleted in new
chr19_GL949752v1_alt	259916	269456	chr19_GL949752v1_alt:259916-269456	0	-	259916	259916	8553170	9	148,53,169,129,39,51,294,36,37,	0,687,963,1224,1661,4753,5647,9027,9503,
#Deleted in new
chr19_GL949752v1_alt	259916	269456	chr19_GL949752v1_alt:259916-269456	1	-	259917	269453	0	9	148,53,38,43,129,39,291,36,37,	0,687,963,1089,1224,1661,5647,9027,9503,
#Deleted in new
chr19_GL949752v1_alt	259995	269485	chr19_GL949752v1_alt:259995-269485	0	-	259995	259995	789624	10	69,53,38,43,129,39,230,200,192,66,	0,608,884,1010,1145,1582,4495,5662,8948,9424,
#Deleted in new
chr19_GL949752v1_alt	260629	269739	chr19_GL949752v1_alt:260629-269739	0	-	260629	260629	8553170	9	27,38,43,129,39,51,200,36,61,	0,250,376,511,948,4040,5028,8314,9049,
#Deleted in new
chr19_GL949752v1_alt	260886	269516	chr19_GL949752v1_alt:260886-269516	0	-	260886	260886	8553170	8	31,43,129,255,51,294,36,97,	0,119,254,475,3783,4677,8057,8533,
#Deleted in new
chr19_GL949752v1_alt	261206	269748	chr19_GL949752v1_alt:261206-269748	0	-	261206	261206	8553170	6	63,39,51,291,36,70,	0,371,3463,4357,7737,8472,
#Deleted in new
chr19_GL949752v1_alt	261234	269580	chr19_GL949752v1_alt:261234-269580	0	-	261234	261234	8553170	6	35,39,51,328,36,161,	0,343,3435,4329,7709,8185,
#Deleted in new
chr19_GL949752v1_alt	261481	269536	chr19_GL949752v1_alt:261481-269536	0	-	261481	261481	8553170	4	135,294,36,117,	0,4082,7462,7938,
#Deleted in new
chr19_GL949752v1_alt	261487	269534	chr19_GL949752v1_alt:261487-269534	0	-	261487	261487	8553170	5	129,51,200,36,115,	0,3182,4170,7456,7932,
#Deleted in new
chr19_GL949752v1_alt	261574	269580	chr19_GL949752v1_alt:261574-269580	0	-	261574	261574	8553170	5	42,51,234,36,161,	0,3095,4083,7369,7845,
#Deleted in new
chr19_GL949752v1_alt	264651	269150	chr19_GL949752v1_alt:264651-269150	0	-	264651	264651	8553170	3	69,294,207,	0,912,4292,
#Deleted in new
chr19_GL949752v1_alt	265342	269453	chr19_GL949752v1_alt:265342-269453	0	-	265342	265342	8553170	4	40,294,192,34,	0,221,3601,4077,
#Deleted in new
chr19_GL949752v1_alt	265447	269498	chr19_GL949752v1_alt:265447-269498	0	-	265447	265447	8553170	3	444,36,79,	0,3496,3972,
#Deleted in new
chr19_GL949752v1_alt	265607	273250	chr19_GL949752v1_alt:265607-273250	0	-	265607	265607	8553170	3	250,36,288,	0,3336,7355,
#Deleted in new
chr19_GL949752v1_alt	265641	275291	chr19_GL949752v1_alt:265641-275291	0	-	265641	265641	8553170	3	216,36,379,	0,3302,9271,
#Deleted in new
chr19_GL949752v1_alt	265648	269498	chr19_GL949752v1_alt:265648-269498	0	-	265648	265648	8553170	3	206,192,79,	0,3295,3771,
#Deleted in new
chr19_GL949752v1_alt	265671	269580	chr19_GL949752v1_alt:265671-269580	0	-	265671	265671	8553170	3	220,192,161,	0,3272,3748,
#Deleted in new
chr19_GL949752v1_alt	319912	326949	chr19_GL949752v1_alt:319912-326949	0	+	319912	319912	8553170	5	76,72,179,112,66,	0,388,3909,6058,6971,
#Deleted in new
chr19_GL949752v1_alt	320119	341588	chr19_GL949752v1_alt:320119-341588	1	+	320246	340817	789624	14	253,179,112,221,96,73,76,56,93,93,143,46,81,568,	0,3702,5851,6764,11238,13873,14448,15116,15379,15665,20110,20396,20659,20901,
#Deleted in new
chr19_GL949752v1_alt	320124	341588	chr19_GL949752v1_alt:320124-341588	3	+	320246	340817	789624	14	248,179,112,221,96,73,76,56,93,93,143,46,84,568,	0,3697,5846,6759,11233,13868,14443,15111,15374,15660,20105,20391,20651,20896,
#Deleted in new
chr19_GL949752v1_alt	320158	327107	chr19_GL949752v1_alt:320158-327107	0	+	320158	320158	8553170	6	214,11,136,179,112,224,	0,591,1324,3663,5812,6725,
#Deleted in new
chr19_GL949752v1_alt	320161	324189	chr19_GL949752v1_alt:320161-324189	0	+	320161	320161	8553170	2	211,368,	0,3660,
#Deleted in new
chr19_GL949752v1_alt	320205	341407	chr19_GL949752v1_alt:320205-341407	0	+	320205	320205	8553170	15	167,875,173,112,221,96,73,76,56,93,93,143,46,81,387,	0,544,3622,5765,6678,11152,13787,14362,15030,15293,15579,20024,20310,20573,20815,
#Deleted in new
chr19_GL949752v1_alt	320219	341404	chr19_GL949752v1_alt:320219-341404	1	+	320246	341054	789624	13	153,179,112,221,96,73,76,56,93,93,143,81,384,	0,3602,5751,6664,11138,13773,14348,15016,15279,15565,20010,20559,20801,
#Deleted in new
chr19_GL949752v1_alt	321382	326980	chr19_GL949752v1_alt:321382-326980	0	+	321382	321382	8553170	4	242,173,112,97,	0,2445,4588,5501,
#Deleted in new
chr19_GL949752v1_alt	321496	338398	chr19_GL949752v1_alt:321496-338398	1	+	324186	335979	789624	10	122,415,112,212,96,73,76,56,93,2614,	0,2325,4474,5396,9861,12496,13071,13739,14002,14288,
#Deleted in new
chr19_GL949752v1_alt	322955	324230	chr19_GL949752v1_alt:322955-324230	0	+	322955	322955	8553170	3	451,179,86,	0,866,1189,
#Deleted in new
chr19_GL949752v1_alt	323889	326987	chr19_GL949752v1_alt:323889-326987	0	+	323889	323889	8553170	3	347,112,95,	0,2081,3003,
#Deleted in new
chr19_GL949752v1_alt	325361	331418	chr19_GL949752v1_alt:325361-331418	0	+	325361	325361	8553170	4	165,112,221,61,	0,609,1522,5996,
#Deleted in new
chr19_GL949752v1_alt	325392	334039	chr19_GL949752v1_alt:325392-334039	0	+	325392	325392	8553170	5	103,112,221,96,47,	0,578,1491,5965,8600,
#Deleted in new
chr19_GL949752v1_alt	331158	341406	chr19_GL949752v1_alt:331158-341406	1	+	331249	340817	789624	11	93,96,73,76,56,93,93,143,46,84,386,	0,199,2834,3409,4077,4340,4626,9071,9357,9617,9862,
#Deleted in new
chr19_GL949752v1_alt	331158	341407	chr19_GL949752v1_alt:331158-341407	0	+	331158	331158	8553170	11	93,96,73,76,56,93,93,143,46,81,387,	0,199,2834,3409,4077,4340,4626,9071,9357,9620,9862,
#Deleted in new
chr19_GL949752v1_alt	334603	341163	chr19_GL949752v1_alt:334603-341163	0	+	334603	334603	8553170	7	40,56,93,93,143,46,385,	0,632,895,1181,5626,5912,6175,
#Deleted in new
chr19_GL949752v1_alt	335339	339386	chr19_GL949752v1_alt:335339-339386	3	-	335339	335339	8553170	2	472,57,	0,3990,
#Deleted in new
chr19_GL949752v1_alt	339647	341016	chr19_GL949752v1_alt:339647-341016	0	+	339647	339647	8553170	4	154,143,46,238,	0,582,868,1131,
#Deleted in new
chr19_GL949752v1_alt	340692	341405	chr19_GL949752v1_alt:340692-341405	0	+	340692	340692	8553170	2	167,385,	0,328,
#Deleted in new
chr19_GL949752v1_alt	353404	366704	chr19_GL949752v1_alt:353404-366704	3	+	356029	365616	789624	16	592,93,175,102,111,253,142,204,279,141,286,102,69,130,208,1251,	0,2570,3373,3933,4828,5712,6233,6646,7249,7607,7918,9029,9216,9385,9596,12049,
#Deleted in new
chr19_GL949752v1_alt	353572	366520	chr19_GL949752v1_alt:353572-366520	1	+	356029	366520	789624	16	424,93,175,102,253,142,204,279,141,286,102,69,130,254,141,30,	0,2402,3205,3765,5544,6065,6478,7081,7439,7750,8861,9048,9217,9428,12667,12918,
#Deleted in new
chr19_GL949752v1_alt	353885	359310	chr19_GL949752v1_alt:353885-359310	0	+	353885	353885	8553170	4	111,175,102,194,	0,2892,3452,5231,
#Deleted in new
chr19_GL949752v1_alt	354367	357399	chr19_GL949752v1_alt:354367-357399	0	+	356029	357399	789624	4	63,93,175,62,	0,1607,2410,2970,
#Deleted in new
chr19_GL949752v1_alt	359136	366088	chr19_GL949752v1_alt:359136-366088	0	+	359136	363593	789624	10	233,142,204,279,141,286,102,69,130,3088,	0,501,914,1517,1875,2186,3297,3484,3653,3864,
#Deleted in new
chr19_GL949752v1_alt	366478	368402	chr19_GL949752v1_alt:366478-368402	3	-	366777	368283	789624	1	1924,	0,
#Deleted in new
chr19_GL949752v1_alt	369717	377930	chr19_GL949752v1_alt:369717-377930	3	-	369792	370239	789624	3	522,141,212,	0,6556,8001,
#Deleted in new
chr19_GL949752v1_alt	370187	376432	chr19_GL949752v1_alt:370187-376432	0	-	370187	370239	789624	2	52,159,	0,6086,
#Deleted in new
chr19_GL949752v1_alt	376183	377945	chr19_GL949752v1_alt:376183-377945	0	-	376183	376183	8553170	2	231,227,	0,1535,
#Deleted in new
chr19_GL949752v1_alt	402598	412856	chr19_GL949752v1_alt:402598-412856	0	+	402961	412856	789624	3	379,36,248,	0,5819,10010,
#Deleted in new
chr19_GL949752v1_alt	402598	412824	chr19_GL949752v1_alt:402598-412824	0	+	402961	412824	789624	2	379,216,	0,10010,
#Deleted in new
chr19_GL949752v1_alt	407372	415826	chr19_GL949752v1_alt:407372-415826	3	+	407633	415455	789624	5	295,36,294,51,583,	0,1045,5236,6380,7871,
#Deleted in new
chr19_GL949752v1_alt	407616	415405	chr19_GL949752v1_alt:407616-415405	0	+	407633	415405	789624	4	51,36,294,162,	0,801,4992,7627,
#Deleted in new
chr19_GL949752v1_alt	437515	448449	chr19_GL949752v1_alt:437515-448449	3	+	437522	447299	789624	9	41,36,279,306,293,51,123,53,196,	0,254,943,2797,4081,5176,9724,10577,10738,
#Deleted in new
chr19_GL949752v1_alt	440004	450456	chr19_GL949752v1_alt:440004-450456	0	+	440004	440004	8553170	4	614,293,685,2711,	0,1592,2687,7741,
#Deleted in new
chr19_GL949752v1_alt	441677	450485	chr19_GL949752v1_alt:441677-450485	0	+	441677	448299	789624	4	212,51,53,2232,	0,1014,6415,6576,
#Deleted in new
chr19_GL949752v1_alt	477803	479794	chr19_GL949752v1_alt:477803-479794	0	+	477803	477803	8553170	4	516,36,282,180,	0,1156,1381,1811,
#Deleted in new
chr19_GL949752v1_alt	477881	479321	chr19_GL949752v1_alt:477881-479321	0	+	477881	477881	8553170	4	438,215,36,137,	0,700,1078,1303,
#Deleted in new
chr19_GL949752v1_alt	477898	492431	chr19_GL949752v1_alt:477898-492431	3	+	478762	482566	789624	9	421,82,36,282,303,297,303,259,347,	0,816,1061,1286,1716,2241,2792,4450,14186,
#Deleted in new
chr19_GL949752v1_alt	478639	492438	chr19_GL949752v1_alt:478639-492438	1	+	478762	492230	0	7	157,36,282,303,297,303,354,	0,320,545,975,1500,2051,13445,
#Deleted in new
chr19_GL949752v1_alt	478723	492444	chr19_GL949752v1_alt:478723-492444	1	+	478762	492230	0	8	73,36,282,303,297,303,51,360,	0,236,461,891,1416,1967,13170,13361,
#Deleted in new
chr19_GL949752v1_alt	478724	492279	chr19_GL949752v1_alt:478724-492279	1	+	478762	492230	789624	6	72,282,303,297,303,195,	0,460,890,1415,1966,13360,
#Deleted in new
chr19_GL949752v1_alt	478762	492279	chr19_GL949752v1_alt:478762-492279	1	+	478762	492230	789624	5	34,36,244,152,195,	0,197,422,2079,13322,
#Deleted in new
chr19_GL949752v1_alt	498459	504604	chr19_GL949752v1_alt:498459-504604	0	+	498459	498459	789624	7	206,36,288,303,297,303,485,	0,865,1089,1524,2063,2613,5660,
#Deleted in new
chr19_GL949752v1_alt	498459	507265	chr19_GL949752v1_alt:498459-507265	3	+	499128	505701	789624	8	206,82,36,288,303,51,39,1683,	0,621,865,1089,1524,5660,6936,7123,
#Deleted in new
chr19_GL949752v1_alt	498465	505959	chr19_GL949752v1_alt:498465-505959	0	+	498465	498465	789624	9	200,36,288,303,181,303,51,39,377,	0,859,1083,1518,2173,2607,5654,6930,7117,
#Deleted in new
chr19_GL949752v1_alt	498531	505959	chr19_GL949752v1_alt:498531-505959	1	+	498662	505701	789624	10	134,82,36,288,303,297,303,51,39,377,	0,549,793,1017,1452,1991,2541,5588,6864,7051,
#Deleted in new
chr19_GL949752v1_alt	498533	504600	chr19_GL949752v1_alt:498533-504600	0	+	498533	498533	789624	7	132,280,288,303,297,303,481,	0,547,1015,1450,1989,2539,5586,
#Deleted in new
chr19_GL949752v1_alt	498958	501299	chr19_GL949752v1_alt:498958-501299	0	+	498958	498958	8553170	6	204,235,111,26,157,227,	0,643,1025,1302,1704,2114,
#Deleted in new
chr19_GL949752v1_alt	522047	542447	chr19_GL949752v1_alt:522047-542447	3	+	535951	541756	0	16	175,117,82,36,288,303,297,303,51,48,123,76,38,53,156,838,	0,13347,13856,14101,14330,14765,15294,15846,16468,16804,17471,17934,18089,18387,19327,19562,
#Deleted in new
chr19_GL949752v1_alt	535384	542406	chr19_GL949752v1_alt:535384-542406	1	+	535951	541756	0	15	127,82,36,288,303,297,303,51,51,123,76,38,53,156,797,	0,519,764,993,1428,1957,2509,3131,3464,4134,4597,4752,5050,5990,6225,
#Deleted in new
chr19_GL949752v1_alt	535389	542055	chr19_GL949752v1_alt:535389-542055	1	+	535951	541756	0	15	122,82,36,288,303,297,303,51,48,123,76,38,53,159,446,	0,514,759,988,1423,1952,2504,3126,3462,4129,4592,4747,5045,5982,6220,
#Deleted in new
chr19_GL949752v1_alt	535394	542406	chr19_GL949752v1_alt:535394-542406	1	+	535951	541756	789624	14	117,82,36,288,303,297,303,51,123,76,38,53,156,797,	0,509,754,983,1418,1947,2499,3454,4124,4587,4742,5040,5980,6215,
#Deleted in new
chr19_GL949752v1_alt	535951	541897	chr19_GL949752v1_alt:535951-541897	1	+	535951	540446	789624	13	34,36,288,303,297,303,51,48,123,38,53,156,288,	0,197,426,861,1390,1942,2564,2900,3567,4185,4483,5423,5658,
#Deleted in new
chr19_GL949752v1_alt	535951	541756	chr19_GL949752v1_alt:535951-541756	1	+	535951	541756	0	14	34,36,288,303,297,303,51,51,123,76,38,53,159,147,	0,197,426,861,1390,1942,2564,2897,3567,4030,4185,4483,5420,5658,
#Deleted in new
chr19_GL949752v1_alt	537573	538369	chr19_GL949752v1_alt:537573-538369	0	+	537573	537573	8553170	2	65,476,	0,320,
#Deleted in new
chr19_GL949752v1_alt	538000	539126	chr19_GL949752v1_alt:538000-539126	0	+	538000	538000	8553170	3	196,51,275,	0,515,851,
#Deleted in new
chr19_GL949752v1_alt	538003	539061	chr19_GL949752v1_alt:538003-539061	0	+	538003	538003	8553170	3	193,51,213,	0,512,845,
#Deleted in new
chr19_GL949752v1_alt	538020	542406	chr19_GL949752v1_alt:538020-542406	0	+	538020	538020	8553170	8	102,51,51,176,76,38,1096,797,	0,495,828,1445,1961,2116,2414,3589,
#Deleted in new
chr19_GL949752v1_alt	539248	540494	chr19_GL949752v1_alt:539248-540494	0	+	539248	539248	8553170	4	393,76,38,60,	0,733,888,1186,
#Deleted in new
chr19_GL949752v1_alt	548767	554479	chr19_GL949752v1_alt:548767-554479	7	+	548767	548767	16724991	2	78,1567,	0,4145,
#Deleted in new
chr19_GL949752v1_alt	552817	553730	chr19_GL949752v1_alt:552817-553730	5	+	552817	552817	16724991	1	913,	0,
#Deleted in new
chr19_GL949752v1_alt	567008	569217	chr19_GL949752v1_alt:567008-569217	0	+	567915	569217	789624	6	61,39,249,36,285,150,	0,381,692,1405,1627,2059,
#Deleted in new
chr19_GL949752v1_alt	567038	571399	chr19_GL949752v1_alt:567038-571399	0	+	567038	567038	8553170	10	31,39,249,205,300,51,51,117,76,119,	0,351,662,1677,2029,2642,2973,3658,4083,4242,
#Deleted in new
chr19_GL949752v1_alt	567836	573286	chr19_GL949752v1_alt:567836-573286	1	+	567915	572901	789624	12	113,36,285,300,51,51,117,76,38,56,156,532,	0,577,799,1231,1844,2175,2860,3285,3444,3739,4683,4918,
#Deleted in new
chr19_GL949752v1_alt	567852	570504	chr19_GL949752v1_alt:567852-570504	0	+	567852	567852	8553170	4	97,236,300,824,	0,832,1215,1828,
#Deleted in new
chr19_GL949752v1_alt	567852	572901	chr19_GL949752v1_alt:567852-572901	1	+	567915	572901	789624	11	97,285,300,51,51,117,76,38,56,159,147,	0,783,1215,1828,2159,2844,3269,3428,3723,4664,4902,
#Deleted in new
chr19_GL949752v1_alt	567876	573106	chr19_GL949752v1_alt:567876-573106	1	+	567915	572901	789624	12	73,36,285,300,51,51,117,76,38,53,156,352,	0,537,759,1191,1804,2135,2820,3245,3404,3702,4643,4878,
#Deleted in new
chr19_GL949752v1_alt	567881	574618	chr19_GL949752v1_alt:567881-574618	3	+	567915	572901	789624	12	68,36,285,300,51,51,117,76,38,53,159,1864,	0,532,754,1186,1799,2130,2815,3240,3399,3697,4635,4873,
#Deleted in new
chr19_GL949752v1_alt	567901	573077	chr19_GL949752v1_alt:567901-573077	1	+	567915	572901	789624	12	48,36,285,300,51,51,117,76,38,56,159,323,	0,512,734,1166,1779,2110,2795,3220,3379,3674,4615,4853,
#Deleted in new
chr19_GL949752v1_alt	570679	572272	chr19_GL949752v1_alt:570679-572272	0	+	570679	570679	8553170	4	134,75,38,697,	0,443,601,896,
#Deleted in new
chr19_GL949752v1_alt	571167	571917	chr19_GL949752v1_alt:571167-571917	0	+	571167	571167	8553170	3	30,58,339,	0,113,411,
#Deleted in new
chr19_GL949752v1_alt	601232	605586	chr19_GL949752v1_alt:601232-605586	7	+	601232	601232	16724991	7	36,271,351,268,303,45,192,	0,190,608,1074,1591,3987,4162,
#Deleted in new
chr19_GL949752v1_alt	612540	617730	chr19_GL949752v1_alt:612540-617730	7	+	612540	612540	16724991	7	523,285,310,297,303,51,245,	0,686,1120,1639,2189,4746,4945,
#Deleted in new
chr19_GL949752v1_alt	612819	617664	chr19_GL949752v1_alt:612819-617664	5	+	612819	612819	16724991	7	34,322,310,297,303,51,179,	0,370,841,1360,1910,4467,4666,
#Deleted in new
chr19_GL949752v1_alt	628872	640888	chr19_GL949752v1_alt:628872-640888	3	+	628890	640448	789624	8	52,36,285,300,294,105,53,566,	0,729,1535,3093,4971,10732,11299,11450,
#Deleted in new
chr19_GL949752v1_alt	642857	657386	chr19_GL949752v1_alt:642857-657386	3	+	642894	656853	0	8	71,36,300,294,51,105,53,686,	0,979,3452,5267,8811,13125,13692,13843,
#Deleted in new
chr19_GL949752v1_alt	659356	671734	chr19_GL949752v1_alt:659356-671734	7	+	659356	659356	16724991	8	34,36,299,294,51,105,53,206,	0,1091,3585,5409,8868,11454,12021,12172,
#Deleted in new
chr19_GL949752v1_alt	674141	679552	chr19_GL949752v1_alt:674141-679552	0	+	674141	674141	8553170	5	77,36,109,300,54,	0,1041,2473,3525,5357,
#Deleted in new
chr19_GL949752v1_alt	674148	688600	chr19_GL949752v1_alt:674148-688600	3	+	674184	688147	789624	8	70,36,300,294,51,102,53,630,	0,1034,3518,5350,8797,13107,13671,13822,
#Deleted in new
chr19_GL949752v1_alt	690688	694652	chr19_GL949752v1_alt:690688-694652	7	+	690688	690688	16724991	4	34,285,300,294,	0,108,1843,3670,
#Deleted in new
chr19_GL949752v1_alt	707932	718882	chr19_GL949752v1_alt:707932-718882	3	+	707973	718476	789624	8	81,36,285,294,51,105,53,676,	0,280,1216,2374,5263,9556,10122,10274,
#Deleted in new
chr19_GL949752v1_alt	720828	735146	chr19_GL949752v1_alt:720828-735146	3	+	720866	734644	789624	9	72,36,285,300,294,51,105,53,679,	0,1075,1855,3253,5105,8568,12901,13468,13639,
#Deleted in new
chr19_GL949752v1_alt	720842	735146	chr19_GL949752v1_alt:720842-735146	1	+	720866	734644	789624	8	58,36,285,300,294,105,53,679,	0,1061,1841,3239,5091,12887,13454,13625,
#Deleted in new
chr19_GL949752v1_alt	737078	752960	chr19_GL949752v1_alt:737078-752960	3	+	737133	752334	0	8	89,36,300,294,51,105,53,668,	0,2369,4866,6718,10180,14496,15063,15214,
#Deleted in new
chr19_GL949752v1_alt	754832	771590	chr19_GL949752v1_alt:754832-771590	3	+	754865	771106	789624	8	67,36,285,300,294,105,53,694,	0,758,1536,3285,5164,15347,15912,16064,
#Deleted in new
chr19_GL949752v1_alt	754853	771396	chr19_GL949752v1_alt:754853-771396	1	+	754865	771106	789624	9	46,36,285,300,294,51,105,53,500,	0,737,1515,3264,5143,8602,15326,15891,16043,
#Deleted in new
chr19_GL949752v1_alt	773313	773420	chr19_GL949752v1_alt:773313-773420	3	-	773313	773313	8553170	1	107,	0,
#Deleted in new
chr19_GL949752v1_alt	778609	795778	chr19_GL949752v1_alt:778609-795778	1	+	778664	794228	0	5	89,36,291,288,1765,	0,1095,10990,13762,15404,
#Deleted in new
chr19_GL949752v1_alt	778622	794041	chr19_GL949752v1_alt:778622-794041	0	+	778664	794041	789624	3	76,291,28,	0,10977,15391,
#Deleted in new
chr19_GL949752v1_alt	778647	794237	chr19_GL949752v1_alt:778647-794237	1	+	778664	794228	0	4	51,291,288,224,	0,10952,13724,15366,
#Deleted in new
chr19_GL949752v1_alt	778654	793449	chr19_GL949752v1_alt:778654-793449	1	+	778664	792730	0	4	44,36,291,1078,	0,1050,10945,13717,
#Deleted in new
chr19_GL949752v1_alt	778654	793449	chr19_GL949752v1_alt:778654-793449	3	+	778664	792730	0	4	44,291,636,109,	0,10945,13717,14686,
#Deleted in new
chr19_GL949752v1_alt	778659	794255	chr19_GL949752v1_alt:778659-794255	1	+	778664	794228	0	5	39,36,291,222,242,	0,1045,10940,13712,15354,
#Deleted in new
chr19_GL949752v1_alt	778664	792837	chr19_GL949752v1_alt:778664-792837	1	+	778664	792730	789624	3	34,36,466,	0,1040,13707,
#Deleted in new
chr19_GL949752v1_alt	778664	794237	chr19_GL949752v1_alt:778664-794237	1	+	778664	794228	0	4	34,291,222,224,	0,10935,13707,15349,
#Deleted in new
chr19_GL949752v1_alt	778664	794237	chr19_GL949752v1_alt:778664-794237	1	+	778664	794228	0	3	34,288,224,	0,13707,15349,
#Deleted in new
chr19_GL949752v1_alt	778664	794228	chr19_GL949752v1_alt:778664-794228	0	+	778664	778664	8553170	4	34,77,292,215,	0,6544,10934,15349,
#Deleted in new
chr19_GL949752v1_alt	778664	794228	chr19_GL949752v1_alt:778664-794228	1	+	778664	794228	0	4	34,36,291,215,	0,1040,10935,15349,
#Deleted in new
chr19_GL949752v1_alt	810506	820490	chr19_GL949752v1_alt:810506-820490	0	+	810544	817221	0	8	72,36,285,279,48,51,466,391,	0,149,373,3096,3869,6023,6533,9593,
#Deleted in new
chr19_GL949752v1_alt	810506	820379	chr19_GL949752v1_alt:810506-820379	0	+	810544	817221	0	8	72,36,285,279,48,51,389,211,	0,149,373,3096,3869,6023,6533,9662,
#Deleted in new
chr19_GL949752v1_alt	810511	813705	chr19_GL949752v1_alt:810511-813705	0	+	810511	810511	8553170	3	180,285,103,	0,368,3091,
#Deleted in new
chr19_GL949752v1_alt	810511	811135	chr19_GL949752v1_alt:810511-811135	0	+	810511	810511	8553170	2	67,480,	0,144,
#Deleted in new
chr19_GL949752v1_alt	810517	817306	chr19_GL949752v1_alt:810517-817306	3	+	810544	817221	0	7	61,36,285,279,48,51,267,	0,138,362,3085,3858,6012,6522,
#Deleted in new
chr19_GL949752v1_alt	810533	817309	chr19_GL949752v1_alt:810533-817309	1	+	810544	817221	789624	6	45,285,279,48,51,270,	0,346,3069,3842,5996,6506,
#Deleted in new
chr19_GL949752v1_alt	810537	817323	chr19_GL949752v1_alt:810537-817323	1	+	810544	817221	0	6	41,36,279,48,51,284,	0,118,3065,3838,5992,6502,
#Deleted in new
chr19_GL949752v1_alt	810537	817323	chr19_GL949752v1_alt:810537-817323	1	+	810544	817221	0	6	41,36,285,279,48,284,	0,118,342,3065,3838,6502,
#Deleted in new
chr19_GL949752v1_alt	810537	817323	chr19_GL949752v1_alt:810537-817323	1	+	810544	817221	0	5	41,36,279,48,284,	0,118,3065,3838,6502,
#Deleted in new
chr19_GL949752v1_alt	810544	817221	chr19_GL949752v1_alt:810544-817221	1	+	810544	817221	0	5	34,279,48,51,182,	0,3058,3831,5985,6495,
#Deleted in new
chr19_GL949752v1_alt	827858	851863	chr19_GL949752v1_alt:827858-851863	1	-	828089	846063	789624	10	364,168,171,171,171,198,1579,75,316,37,	0,6990,10060,10981,12754,14537,15381,17423,17928,23968,
#Deleted in new
chr19_GL949752v1_alt	827858	851857	chr19_GL949752v1_alt:827858-851857	1	-	828089	846063	789624	10	364,168,171,171,171,114,1579,75,316,31,	0,6990,10060,10981,12754,14537,15381,17423,17928,23968,
#Deleted in new
chr19_GL949752v1_alt	827858	851863	chr19_GL949752v1_alt:827858-851863	1	-	828089	846063	789624	11	364,171,168,171,171,171,198,1579,75,316,37,	0,4096,6990,10060,10981,12754,14537,15381,17423,17928,23968,
#Deleted in new
chr19_GL949752v1_alt	827864	851857	chr19_GL949752v1_alt:827864-851857	3	-	828089	846063	789624	11	358,171,168,171,171,171,114,1579,75,316,31,	0,4090,6984,10054,10975,12748,14531,15375,17417,17922,23962,
#Deleted in new
chr19_GL949752v1_alt	828001	851855	chr19_GL949752v1_alt:828001-851855	1	-	832006	846063	789624	11	221,134,168,171,171,171,114,1579,75,316,29,	0,3953,6847,9917,10838,12611,14394,15238,17280,17785,23825,
#Deleted in new
chr19_GL949752v1_alt	869083	893460	chr19_GL949752v1_alt:869083-893460	0	+	872770	893460	789624	10	126,297,45,72,66,1567,171,165,171,172,	0,3670,8171,11420,15283,15828,18747,19851,23725,24205,
#Deleted in new
chr19_GL949752v1_alt	869084	903922	chr19_GL949752v1_alt:869084-903922	1	+	872770	903680	789624	14	125,155,73,45,72,66,1567,171,165,171,171,171,171,381,	0,3669,3893,8170,11419,15282,15827,18746,19850,23724,24204,27966,31014,34457,
#Deleted in new
chr19_GL949752v1_alt	869084	903922	chr19_GL949752v1_alt:869084-903922	1	+	872770	903680	789624	12	125,297,45,72,1567,171,165,171,171,171,171,381,	0,3669,8170,11419,15827,18746,19850,23724,24204,27966,31014,34457,
#Deleted in new
chr19_GL949752v1_alt	869084	903922	chr19_GL949752v1_alt:869084-903922	3	+	872770	903680	789624	13	125,297,45,72,66,1567,171,165,171,171,171,171,381,	0,3669,8170,11419,15282,15827,18746,19850,23724,24204,27966,31014,34457,
#Deleted in new
chr19_GL949752v1_alt	869116	893460	chr19_GL949752v1_alt:869116-893460	0	+	872770	892983	789624	10	93,297,45,72,66,1567,171,165,372,172,	0,3637,8138,11387,15250,15795,18714,19818,23692,24172,
#Deleted in new
chr19_GL949752v1_alt	869160	893460	chr19_GL949752v1_alt:869160-893460	0	+	872770	893460	789624	9	49,297,45,66,1567,171,165,171,172,	0,3593,8094,15206,15751,18670,19774,23648,24128,
#Deleted in new
chr19_GL949752v1_alt	869167	893460	chr19_GL949752v1_alt:869167-893460	0	+	872770	893460	789624	9	42,297,45,72,1567,171,165,171,172,	0,3586,8087,11336,15744,18663,19767,23641,24121,
#Deleted in new
chr19_GL949752v1_alt	869175	884396	chr19_GL949752v1_alt:869175-884396	0	+	869175	869175	8553170	6	34,297,45,99,72,30,	0,3578,8079,10432,11328,15191,
#Deleted in new
chr19_GL949752v1_alt	916486	941046	chr19_GL949752v1_alt:916486-941046	1	-	917702	941018	0	7	1461,51,60,285,258,33,62,	0,1978,4947,13873,18434,18801,24498,
#Deleted in new
chr19_GL949752v1_alt	916486	941046	chr19_GL949752v1_alt:916486-941046	3	-	916863	941018	0	8	1461,55,60,54,285,258,33,62,	0,1974,4947,11513,13873,18434,18801,24498,
#Deleted in new
chr19_GL949752v1_alt	947105	965999	chr19_GL949752v1_alt:947105-965999	3	-	947855	959561	789624	7	986,102,213,105,156,119,250,	0,3063,4005,4335,12329,14833,18644,
#Deleted in new
chr19_GL949753v2_alt	15199	27563	chr19_GL949753v2_alt:15199-27563	1	-	15327	27563	789624	8	248,38,38,28,93,39,82,9,	0,946,1083,1336,1444,10577,12066,12355,
#Deleted in new
chr19_GL949753v2_alt	15199	38320	chr19_GL949753v2_alt:15199-38320	1	-	15327	38144	789624	8	248,38,38,28,39,285,36,210,	0,946,1083,1336,10577,17473,17864,22911,
#Deleted in new
chr19_GL949753v2_alt	15199	38320	chr19_GL949753v2_alt:15199-38320	3	-	15327	38144	789624	9	248,38,38,28,93,39,285,36,210,	0,946,1083,1336,1444,10577,17473,17864,22911,
#Deleted in new
chr19_GL949753v2_alt	15200	38320	chr19_GL949753v2_alt:15200-38320	1	-	15327	38144	789624	6	247,38,38,28,93,210,	0,945,1082,1335,1443,22910,
#Deleted in new
chr19_GL949753v2_alt	22732	38320	chr19_GL949753v2_alt:22732-38320	1	-	22732	38144	789624	5	38,39,285,36,210,	0,3044,9940,10331,15378,
#Deleted in new
chr19_GL949753v2_alt	44313	55747	chr19_GL949753v2_alt:44313-55747	3	-	44369	55722	789624	5	214,297,291,36,59,	0,3971,4875,5934,11375,
#Deleted in new
chr19_GL949753v2_alt	69047	75196	chr19_GL949753v2_alt:69047-75196	1	-	69598	75196	789624	6	688,282,304,14,33,37,	0,1202,2214,2520,5104,6112,
#Deleted in new
chr19_GL949753v2_alt	69047	77107	chr19_GL949753v2_alt:69047-77107	1	-	69598	75196	0	7	688,282,303,12,33,196,33,	0,1202,2214,4946,5104,6112,8027,
#Deleted in new
chr19_GL949753v2_alt	69047	77107	chr19_GL949753v2_alt:69047-77107	1	-	70055	75196	0	6	1484,303,12,33,196,33,	0,2214,4946,5104,6112,8027,
#Deleted in new
chr19_GL949753v2_alt	69047	77107	chr19_GL949753v2_alt:69047-77107	1	-	70055	75196	0	5	1484,303,33,196,33,	0,2214,5104,6112,8027,
#Deleted in new
chr19_GL949753v2_alt	69047	77107	chr19_GL949753v2_alt:69047-77107	3	-	70055	75196	0	4	1484,303,196,33,	0,2214,6112,8027,
#Deleted in new
chr19_GL949753v2_alt	77272	81393	chr19_GL949753v2_alt:77272-81393	3	+	77299	81322	789624	4	37,75,78,163,	0,262,3081,3958,
#Deleted in new
chr19_GL949753v2_alt	81432	90168	chr19_GL949753v2_alt:81432-90168	3	-	81469	89762	789624	6	157,219,70,71,259,429,	0,1013,1313,3114,7502,8307,
#Deleted in new
chr19_GL949753v2_alt	89902	106263	chr19_GL949753v2_alt:89902-106263	1	+	92771	105866	0	13	388,185,61,84,98,107,170,158,90,128,73,314,413,	0,2861,3163,6449,7086,8043,8338,9088,11113,12658,12890,13642,15948,
#Deleted in new
chr19_GL949753v2_alt	89902	106263	chr19_GL949753v2_alt:89902-106263	3	+	92771	105976	0	14	388,185,61,84,98,107,170,158,90,128,73,129,99,413,	0,2861,3163,6449,7086,8043,8338,9088,11113,12658,12890,13642,13857,15948,
#Deleted in new
chr19_GL949753v2_alt	112548	130558	chr19_GL949753v2_alt:112548-130558	3	+	117827	130258	0	18	274,75,68,75,90,129,96,220,134,57,388,124,199,100,199,133,126,399,	0,5229,5419,5742,5960,6306,6537,7898,8210,8901,10447,10919,11859,14527,14729,15168,16016,17611,
#Deleted in new
chr19_GL949753v2_alt	116224	130531	chr19_GL949753v2_alt:116224-130531	1	+	117827	130258	0	17	1628,68,75,90,129,96,220,134,57,388,124,199,100,199,133,126,372,	0,1743,2066,2284,2630,2861,4222,4534,5225,6771,7243,8183,10851,11053,11492,12340,13935,
#Deleted in new
chr19_GL949753v2_alt	118853	130531	chr19_GL949753v2_alt:118853-130531	1	+	120506	128355	789624	14	130,96,276,134,57,388,124,199,100,199,133,213,344,372,	0,232,1537,1905,2596,4142,4614,5554,8222,8424,8863,9177,9493,11306,
#Deleted in new
chr19_GL949753v2_alt	130493	134559	chr19_GL949753v2_alt:130493-134559	3	-	130571	134546	789624	4	298,263,180,145,	0,1120,2639,3921,
#Deleted in new
chr19_GL949753v2_alt	135015	148058	chr19_GL949753v2_alt:135015-148058	3	-	135156	147926	789624	15	210,79,156,131,184,98,127,164,168,148,122,233,149,232,211,	0,302,713,965,1936,2504,2864,3554,4266,5251,7995,8272,9348,11737,12832,
#Deleted in new
chr19_GL949753v2_alt	148220	164847	chr19_GL949753v2_alt:148220-164847	1	-	148851	163476	789624	8	1019,177,361,160,127,130,79,545,	0,5375,7383,10297,13936,14964,15180,16082,
#Deleted in new
chr19_GL949753v2_alt	148220	164847	chr19_GL949753v2_alt:148220-164847	1	-	148851	163298	789624	7	1019,177,361,160,130,79,545,	0,5375,7383,10297,14964,15180,16082,
#Deleted in new
chr19_GL949753v2_alt	148220	164847	chr19_GL949753v2_alt:148220-164847	3	-	148851	163298	789624	6	1019,177,361,160,130,545,	0,5375,7383,10297,14964,16082,
#Deleted in new
chr19_GL949753v2_alt	165232	169508	chr19_GL949753v2_alt:165232-169508	1	+	166329	168331	789624	5	183,247,244,258,1365,	0,1093,1453,1848,2911,
#Deleted in new
chr19_GL949753v2_alt	165232	169508	chr19_GL949753v2_alt:165232-169508	3	+	165331	168640	789624	6	104,247,244,258,144,918,	0,1093,1453,1848,2911,3358,
#Deleted in new
chr19_GL949753v2_alt	165695	169508	chr19_GL949753v2_alt:165695-169508	1	+	166329	168331	789624	5	307,247,244,258,1365,	0,630,990,1385,2448,
#Deleted in new
chr19_GL949753v2_alt	175839	182627	chr19_GL949753v2_alt:175839-182627	3	+	176166	182557	789624	5	31,122,123,187,248,	0,302,629,5418,6540,
#Deleted in new
chr19_GL949753v2_alt	175839	181547	chr19_GL949753v2_alt:175839-181547	1	+	176166	181547	789624	5	31,122,123,187,13,	0,302,629,5418,5695,
#Deleted in new
chr19_GL949753v2_alt	191260	217850	chr19_GL949753v2_alt:191260-217850	3	-	192075	217739	789624	13	962,159,53,38,76,117,51,303,297,303,285,36,145,	0,1041,2083,2367,2485,2851,23628,24001,24558,25303,25753,26246,26445,
#Deleted in new
chr19_GL949753v2_alt	191910	217741	chr19_GL949753v2_alt:191910-217741	1	-	192075	217739	789624	14	312,159,53,38,76,117,51,74,229,297,303,285,36,36,	0,391,1433,1717,1835,2201,3228,3601,23425,23908,24653,25103,25596,25795,
#Deleted in new
chr19_GL949753v2_alt	191910	217741	chr19_GL949753v2_alt:191910-217741	1	-	192075	217739	789624	15	312,156,53,38,76,117,51,51,74,229,297,303,285,36,36,	0,391,1433,1717,1835,2201,2941,3228,3601,23425,23908,24653,25103,25596,25795,
#Deleted in new
chr19_GL949753v2_alt	191910	217741	chr19_GL949753v2_alt:191910-217741	1	-	216105	217739	789624	12	312,156,38,76,117,51,303,297,217,285,36,36,	0,391,1717,1835,2201,22978,23351,23908,24739,25103,25596,25795,
#Deleted in new
chr19_GL949753v2_alt	194824	217770	chr19_GL949753v2_alt:194824-217770	1	-	194907	217739	789624	8	182,182,303,297,303,285,36,65,	0,183,20437,20994,21739,22189,22682,22881,
#Deleted in new
chr19_GL949753v2_alt	194824	217770	chr19_GL949753v2_alt:194824-217770	1	-	214682	217739	789624	8	78,288,303,297,303,285,36,65,	0,19827,20437,20994,21739,22189,22682,22881,
#Deleted in new
chr19_GL949753v2_alt	213809	217756	chr19_GL949753v2_alt:213809-217756	0	-	216105	217739	789624	8	268,51,303,297,217,285,36,51,	0,1079,1452,2009,2840,3204,3697,3896,
#Deleted in new
chr19_GL949753v2_alt	213916	217783	chr19_GL949753v2_alt:213916-217783	1	-	213940	217739	789624	7	161,51,303,303,285,36,78,	0,972,1345,2647,3097,3590,3789,
#Deleted in new
chr19_GL949753v2_alt	213940	217850	chr19_GL949753v2_alt:213940-217850	1	-	213940	217739	789624	8	137,51,303,297,303,285,36,145,	0,948,1321,1878,2623,3073,3566,3765,
#Deleted in new
chr19_GL949753v2_alt	213946	217739	chr19_GL949753v2_alt:213946-217739	0	-	213946	217739	789624	8	136,49,303,297,303,285,36,34,	0,945,1315,1872,2617,3067,3560,3759,
#Deleted in new
chr19_GL949753v2_alt	225412	232307	chr19_GL949753v2_alt:225412-232307	3	-	225789	232196	789624	12	524,53,38,64,117,51,51,303,297,285,36,145,	0,1644,1956,2076,2461,3608,3955,4325,4876,6079,6551,6750,
#Deleted in new
chr19_GL949753v2_alt	225428	232295	chr19_GL949753v2_alt:225428-232295	0	-	225428	225428	8553170	12	744,53,38,64,1198,51,303,297,300,169,36,133,	0,1628,1940,2060,2445,3939,4309,4860,5617,6063,6535,6734,
#Deleted in new
chr19_GL949753v2_alt	225470	232276	chr19_GL949753v2_alt:225470-232276	1	-	225789	232196	789624	12	466,53,38,64,117,48,51,303,297,285,36,114,	0,1586,1898,2018,2403,3550,3897,4267,4818,6021,6493,6692,
#Deleted in new
chr19_GL949753v2_alt	225472	232265	chr19_GL949753v2_alt:225472-232265	1	-	225789	232196	789624	14	464,159,53,38,64,117,48,51,303,297,300,285,36,103,	0,541,1584,1896,2016,2401,3548,3895,4265,4816,5573,6019,6491,6690,
#Deleted in new
chr19_GL949753v2_alt	225472	232295	chr19_GL949753v2_alt:225472-232295	1	-	225789	232196	789624	13	464,53,38,64,117,48,51,303,297,300,285,36,133,	0,1584,1896,2016,2401,3548,3895,4265,4816,5573,6019,6491,6690,
#Deleted in new
chr19_GL949753v2_alt	225499	232267	chr19_GL949753v2_alt:225499-232267	1	-	225789	232196	789624	13	437,53,38,64,117,51,51,303,297,300,285,36,105,	0,1557,1869,1989,2374,3521,3868,4238,4789,5546,5992,6464,6663,
#Deleted in new
chr19_GL949753v2_alt	225549	232248	chr19_GL949753v2_alt:225549-232248	0	-	225549	225549	8553170	3	4491,297,757,	0,4739,5942,
#Deleted in new
chr19_GL949753v2_alt	225558	232277	chr19_GL949753v2_alt:225558-232277	0	-	225558	225558	8553170	9	611,53,38,64,1195,452,164,36,115,	0,1498,1810,1930,2315,3809,6054,6405,6604,
#Deleted in new
chr19_GL949753v2_alt	226767	227991	chr19_GL949753v2_alt:226767-227991	0	-	226767	226767	8553170	5	196,53,38,64,118,	0,289,601,721,1106,
#Deleted in new
chr19_GL949753v2_alt	229214	230339	chr19_GL949753v2_alt:229214-230339	0	-	229214	229214	8553170	3	204,303,51,	0,523,1074,
#Deleted in new
chr19_GL949753v2_alt	230509	232288	chr19_GL949753v2_alt:230509-232288	0	-	230509	230509	8553170	5	76,56,285,36,126,	0,536,982,1454,1653,
#Deleted in new
chr19_GL949753v2_alt	230557	232213	chr19_GL949753v2_alt:230557-232213	0	-	230557	230557	8553170	3	28,285,250,	0,934,1406,
#Deleted in new
chr19_GL949753v2_alt	231157	232274	chr19_GL949753v2_alt:231157-232274	0	-	231157	231157	8553170	3	188,285,311,	0,334,806,
#Deleted in new
chr19_GL949753v2_alt	231245	232612	chr19_GL949753v2_alt:231245-232612	0	-	231245	232196	789624	5	100,285,36,85,133,	0,246,718,917,1234,
#Deleted in new
chr19_GL949753v2_alt	238944	239047	chr19_GL949753v2_alt:238944-239047	3	-	238944	238944	8553170	1	103,	0,
#Deleted in new
chr19_GL949753v2_alt	243005	244036	chr19_GL949753v2_alt:243005-244036	7	+	243005	243005	16724991	1	1031,	0,
#Deleted in new
chr19_GL949753v2_alt	248816	255877	chr19_GL949753v2_alt:248816-255877	3	-	249676	255490	789624	14	1007,53,38,76,123,48,51,303,297,303,285,36,82,80,	0,2128,2441,2558,2984,3727,4066,4437,4989,5522,5968,6441,6640,6981,
#Deleted in new
chr19_GL949753v2_alt	249345	256080	chr19_GL949753v2_alt:249345-256080	1	-	249676	255490	789624	14	478,53,38,76,123,48,51,303,297,303,285,36,82,126,	0,1599,1912,2029,2455,3198,3537,3908,4460,4993,5439,5912,6111,6609,
#Deleted in new
chr19_GL949753v2_alt	249419	256062	chr19_GL949753v2_alt:249419-256062	1	-	249676	255490	0	14	404,53,38,76,123,51,51,303,297,303,285,36,82,108,	0,1525,1838,1955,2381,3124,3463,3834,4386,4919,5365,5838,6037,6535,
#Deleted in new
chr19_GL949753v2_alt	249432	256091	chr19_GL949753v2_alt:249432-256091	0	-	249432	249432	8553170	13	391,53,38,76,794,51,303,297,303,285,36,82,137,	0,1512,1825,1942,2368,3450,3821,4373,4906,5352,5825,6024,6522,
#Deleted in new
chr19_GL949753v2_alt	249444	255568	chr19_GL949753v2_alt:249444-255568	0	-	249444	249444	789624	13	379,53,38,76,173,48,51,303,297,303,285,36,112,	0,1500,1813,1930,2356,3099,3438,3809,4361,4894,5340,5813,6012,
#Deleted in new
chr19_GL949753v2_alt	249489	253459	chr19_GL949753v2_alt:249489-253459	0	-	249489	249489	8553170	8	334,53,55,76,123,51,51,206,	0,1455,1751,1885,2311,3054,3393,3764,
#Deleted in new
chr19_GL949753v2_alt	249507	255492	chr19_GL949753v2_alt:249507-255492	1	-	250985	255490	789624	12	316,53,38,123,51,51,303,297,303,285,36,36,	0,1437,1750,2293,3036,3375,3746,4298,4831,5277,5750,5949,
#Deleted in new
chr19_GL949753v2_alt	250886	251537	chr19_GL949753v2_alt:250886-251537	0	-	250886	250886	8553170	2	409,163,	0,488,
#Deleted in new
chr19_GL949753v2_alt	250937	252193	chr19_GL949753v2_alt:250937-252193	0	-	250937	250937	8553170	4	60,38,76,393,	0,320,437,863,
#Deleted in new
chr19_GL949753v2_alt	254335	256108	chr19_GL949753v2_alt:254335-256108	0	-	254335	254335	8553170	4	306,285,36,154,	0,449,922,1619,
#Deleted in new
chr19_GL949753v2_alt	254530	255660	chr19_GL949753v2_alt:254530-255660	0	-	254530	254530	8553170	3	111,232,204,	0,254,926,
#Deleted in new
chr19_GL949753v2_alt	254538	256150	chr19_GL949753v2_alt:254538-256150	0	-	254538	254538	8553170	4	103,170,82,196,	0,246,918,1416,
#Deleted in new
chr19_GL949753v2_alt	254571	255821	chr19_GL949753v2_alt:254571-255821	0	-	254571	254571	8553170	4	70,285,36,365,	0,213,686,885,
#Deleted in new
chr19_GL949753v2_alt	254783	256102	chr19_GL949753v2_alt:254783-256102	0	-	254783	254783	8553170	4	286,36,75,148,	0,474,673,1171,
#Deleted in new
chr19_GL949753v2_alt	254798	256101	chr19_GL949753v2_alt:254798-256101	0	-	254798	254798	8553170	4	271,51,82,147,	0,459,658,1156,
#Deleted in new
chr19_GL949753v2_alt	255006	256086	chr19_GL949753v2_alt:255006-256086	0	-	255006	255006	8553170	3	63,281,132,	0,251,948,
#Deleted in new
chr19_GL949753v2_alt	255026	256311	chr19_GL949753v2_alt:255026-256311	0	-	255026	255957	789624	5	43,36,82,117,68,	0,231,430,928,1217,
#Deleted in new
chr19_GL949753v2_alt	268784	275879	chr19_GL949753v2_alt:268784-275879	3	-	269042	275314	789624	10	382,34,51,303,297,303,288,36,82,135,	0,542,2410,4283,4839,5372,5822,6299,6496,6960,
#Deleted in new
chr19_GL949753v2_alt	270994	275406	chr19_GL949753v2_alt:270994-275406	1	-	271186	275314	0	7	251,303,297,303,288,36,126,	0,2073,2629,3162,3612,4089,4286,
#Deleted in new
chr19_GL949753v2_alt	274648	281079	chr19_GL949753v2_alt:274648-281079	0	-	274648	275314	789624	6	246,36,214,118,36,87,	0,435,632,1096,5684,6344,
#Deleted in new
chr19_GL949753v2_alt	274851	281093	chr19_GL949753v2_alt:274851-281093	0	-	274851	275314	789624	7	43,36,82,118,65,36,101,	0,232,429,893,1193,5481,6141,
#Deleted in new
chr19_GL949753v2_alt	288602	294640	chr19_GL949753v2_alt:288602-294640	3	-	288945	294520	0	7	480,51,303,285,36,85,123,	0,628,4312,4762,5233,5435,5915,
#Deleted in new
chr19_GL949753v2_alt	288784	294575	chr19_GL949753v2_alt:288784-294575	1	-	288945	294520	0	6	298,51,303,285,85,58,	0,446,4130,4580,5253,5733,
#Deleted in new
chr19_GL949753v2_alt	290415	318669	chr19_GL949753v2_alt:290415-318669	0	-	290415	290415	8553170	8	657,239,85,167,156,51,51,328,	0,1389,3622,11504,21184,23600,24998,27926,
#Deleted in new
chr19_GL949753v2_alt	292665	294592	chr19_GL949753v2_alt:292665-294592	1	-	292828	294520	0	4	552,285,85,75,	0,699,1372,1852,
#Deleted in new
chr19_GL949753v2_alt	292783	294599	chr19_GL949753v2_alt:292783-294599	1	-	292828	294520	0	5	434,285,36,85,82,	0,581,1052,1254,1734,
#Deleted in new
chr19_GL949753v2_alt	315039	320651	chr19_GL949753v2_alt:315039-320651	3	-	315070	320594	789624	8	225,51,303,297,300,285,36,91,	0,374,3302,3861,4397,4857,5327,5521,
#Deleted in new
chr19_GL949753v2_alt	315039	320659	chr19_GL949753v2_alt:315039-320659	0	-	315039	315039	8553170	7	225,51,303,297,300,285,293,	0,374,3302,3861,4397,4857,5327,
#Deleted in new
chr19_GL949753v2_alt	335586	352514	chr19_GL949753v2_alt:335586-352514	3	-	337229	352226	789624	10	1790,53,38,43,129,39,51,291,36,292,	0,2329,2605,2731,2866,3303,6395,7289,10669,16636,
#Deleted in new
chr19_GL949753v2_alt	335614	337974	chr19_GL949753v2_alt:335614-337974	0	-	335614	335614	8553170	2	1762,59,	0,2301,
#Deleted in new
chr19_GL949753v2_alt	335714	352483	chr19_GL949753v2_alt:335714-352483	1	-	337229	352238	789624	9	1662,53,38,43,129,39,51,294,261,	0,2201,2477,2603,2738,3175,6267,7161,16508,
#Deleted in new
chr19_GL949753v2_alt	336637	339309	chr19_GL949753v2_alt:336637-339309	0	-	336637	336637	8553170	5	739,53,38,43,857,	0,1278,1554,1680,1815,
#Deleted in new
chr19_GL949753v2_alt	336638	346825	chr19_GL949753v2_alt:336638-346825	1	-	337229	346765	0	10	738,53,38,43,129,39,51,294,36,94,	0,1277,1553,1679,1814,2251,5343,6237,9617,10093,
#Deleted in new
chr19_GL949753v2_alt	336638	346883	chr19_GL949753v2_alt:336638-346883	1	-	337229	346765	0	9	738,53,38,43,129,39,294,36,152,	0,1277,1553,1679,1814,2251,6237,9617,10093,
#Deleted in new
chr19_GL949753v2_alt	336672	346956	chr19_GL949753v2_alt:336672-346956	1	-	337229	346765	789624	10	704,53,38,43,129,39,51,291,36,225,	0,1243,1519,1645,1780,2217,5309,6203,9583,10059,
#Deleted in new
chr19_GL949753v2_alt	336919	338019	chr19_GL949753v2_alt:336919-338019	0	-	336919	336919	8553170	2	457,104,	0,996,
#Deleted in new
chr19_GL949753v2_alt	337090	338838	chr19_GL949753v2_alt:337090-338838	0	-	337090	337090	8553170	5	286,53,38,43,386,	0,825,1101,1227,1362,
#Deleted in new
chr19_GL949753v2_alt	337103	346845	chr19_GL949753v2_alt:337103-346845	0	-	337103	337103	8553170	7	273,53,390,39,294,36,114,	0,812,1088,1786,5772,9152,9628,
#Deleted in new
chr19_GL949753v2_alt	337127	338713	chr19_GL949753v2_alt:337127-338713	0	-	337127	337127	8553170	6	249,53,38,43,129,40,	0,788,1064,1190,1325,1546,
#Deleted in new
chr19_GL949753v2_alt	337162	343153	chr19_GL949753v2_alt:337162-343153	0	-	337162	337162	8553170	7	214,53,169,129,39,51,184,	0,753,1029,1290,1727,4819,5807,
#Deleted in new
chr19_GL949753v2_alt	337228	346768	chr19_GL949753v2_alt:337228-346768	1	-	337229	346765	0	9	148,53,38,43,129,39,291,36,37,	0,687,963,1089,1224,1661,5647,9027,9503,
#Deleted in new
chr19_GL949753v2_alt	337228	346768	chr19_GL949753v2_alt:337228-346768	0	-	337228	337228	8553170	9	148,53,169,129,39,51,294,36,37,	0,687,963,1224,1661,4753,5647,9027,9503,
#Deleted in new
chr19_GL949753v2_alt	337318	346797	chr19_GL949753v2_alt:337318-346797	0	-	337318	337318	789624	10	58,53,38,43,129,39,230,200,192,66,	0,597,873,999,1134,1571,4484,5651,8937,9413,
#Deleted in new
chr19_GL949753v2_alt	337941	347051	chr19_GL949753v2_alt:337941-347051	0	-	337941	337941	8553170	9	27,38,43,129,39,51,200,36,61,	0,250,376,511,948,4040,5028,8314,9049,
#Deleted in new
chr19_GL949753v2_alt	338198	346828	chr19_GL949753v2_alt:338198-346828	0	-	338198	338198	8553170	8	31,43,129,255,51,294,36,97,	0,119,254,475,3783,4677,8057,8533,
#Deleted in new
chr19_GL949753v2_alt	338518	347060	chr19_GL949753v2_alt:338518-347060	0	-	338518	338518	8553170	6	63,39,51,291,36,70,	0,371,3463,4357,7737,8472,
#Deleted in new
chr19_GL949753v2_alt	338546	346892	chr19_GL949753v2_alt:338546-346892	0	-	338546	338546	8553170	6	35,39,51,328,36,161,	0,343,3435,4329,7709,8185,
#Deleted in new
chr19_GL949753v2_alt	338793	346848	chr19_GL949753v2_alt:338793-346848	0	-	338793	338793	8553170	4	135,294,36,117,	0,4082,7462,7938,
#Deleted in new
chr19_GL949753v2_alt	338799	346846	chr19_GL949753v2_alt:338799-346846	0	-	338799	338799	8553170	5	129,51,200,36,115,	0,3182,4170,7456,7932,
#Deleted in new
chr19_GL949753v2_alt	338886	346892	chr19_GL949753v2_alt:338886-346892	0	-	338886	338886	8553170	5	42,51,234,36,161,	0,3095,4083,7369,7845,
#Deleted in new
chr19_GL949753v2_alt	342654	346791	chr19_GL949753v2_alt:342654-346791	0	-	342654	342654	8553170	4	40,294,192,60,	0,221,3601,4077,
#Deleted in new
chr19_GL949753v2_alt	342759	346810	chr19_GL949753v2_alt:342759-346810	0	-	342759	342759	8553170	3	444,36,79,	0,3496,3972,
#Deleted in new
chr19_GL949753v2_alt	342918	346892	chr19_GL949753v2_alt:342918-346892	0	-	342918	342918	8553170	3	285,192,161,	0,3337,3813,
#Deleted in new
chr19_GL949753v2_alt	342919	350560	chr19_GL949753v2_alt:342919-350560	0	-	342919	342919	8553170	3	250,36,288,	0,3336,7353,
#Deleted in new
chr19_GL949753v2_alt	342947	346892	chr19_GL949753v2_alt:342947-346892	0	-	342947	342947	8553170	3	219,192,161,	0,3308,3784,
#Deleted in new
chr19_GL949753v2_alt	342947	346892	chr19_GL949753v2_alt:342947-346892	0	-	342947	342947	8553170	3	219,192,161,	0,3308,3784,
#Deleted in new
chr19_GL949753v2_alt	342953	352601	chr19_GL949753v2_alt:342953-352601	0	-	342953	342953	8553170	3	216,36,379,	0,3302,9269,
#Deleted in new
chr19_GL949753v2_alt	363078	364011	chr19_GL949753v2_alt:363078-364011	0	+	363078	363361	789624	2	57,797,	0,136,
#Deleted in new
chr19_GL949753v2_alt	363078	363660	chr19_GL949753v2_alt:363078-363660	0	+	363078	363361	789624	2	57,446,	0,136,
#Deleted in new
chr19_GL949753v2_alt	363078	364011	chr19_GL949753v2_alt:363078-364011	0	+	363078	363078	8553170	2	57,797,	0,136,
#Deleted in new
chr19_GL949753v2_alt	363078	363361	chr19_GL949753v2_alt:363078-363361	0	+	363078	363361	789624	2	57,147,	0,136,
#Deleted in new
chr19_GL949753v2_alt	363078	364052	chr19_GL949753v2_alt:363078-364052	3	+	363078	363361	789624	2	57,838,	0,136,
#Deleted in new
chr19_GL949753v2_alt	370372	376084	chr19_GL949753v2_alt:370372-376084	7	+	370372	370372	16724991	2	78,1567,	0,4145,
#Deleted in new
chr19_GL949753v2_alt	374429	375336	chr19_GL949753v2_alt:374429-375336	5	+	374429	374429	16724991	1	907,	0,
#Deleted in new
chr19_GL949753v2_alt	388617	396863	chr19_GL949753v2_alt:388617-396863	3	+	389524	394523	789624	14	61,39,249,36,285,300,51,51,117,76,38,53,159,2487,	0,381,692,1418,1640,2072,2685,3016,3701,4126,4285,4583,5521,5759,
#Deleted in new
chr19_GL949753v2_alt	388647	393254	chr19_GL949753v2_alt:388647-393254	0	+	388647	388647	8553170	11	31,39,249,205,300,51,51,117,76,38,53,	0,351,662,1690,2042,2655,2986,3671,4096,4255,4554,
#Deleted in new
chr19_GL949753v2_alt	389445	394908	chr19_GL949753v2_alt:389445-394908	1	+	389524	394523	789624	12	113,36,285,300,51,51,117,76,38,56,156,532,	0,590,812,1244,1857,2188,2873,3298,3457,3752,4696,4931,
#Deleted in new
chr19_GL949753v2_alt	389461	392126	chr19_GL949753v2_alt:389461-392126	0	+	389461	389461	8553170	4	97,236,300,824,	0,845,1228,1841,
#Deleted in new
chr19_GL949753v2_alt	389485	394728	chr19_GL949753v2_alt:389485-394728	1	+	389524	394523	789624	12	73,36,285,300,51,51,117,76,38,53,156,352,	0,550,772,1204,1817,2148,2833,3258,3417,3715,4656,4891,
#Deleted in new
chr19_GL949753v2_alt	389490	396860	chr19_GL949753v2_alt:389490-396860	1	+	389524	394523	789624	12	68,36,285,300,51,51,117,76,38,53,159,2484,	0,545,767,1199,1812,2143,2828,3253,3412,3710,4648,4886,
#Deleted in new
chr19_GL949753v2_alt	389510	394699	chr19_GL949753v2_alt:389510-394699	1	+	389524	394523	789624	12	48,36,285,300,51,51,117,76,38,56,159,323,	0,525,747,1179,1792,2123,2808,3233,3392,3687,4628,4866,
#Deleted in new
chr19_GL949753v2_alt	392301	393894	chr19_GL949753v2_alt:392301-393894	0	+	392301	392301	8553170	4	134,75,38,697,	0,443,601,896,
#Deleted in new
chr19_GL949753v2_alt	392789	393539	chr19_GL949753v2_alt:392789-393539	0	+	392789	392789	8553170	3	30,58,339,	0,113,411,
#Deleted in new
chr19_GL949753v2_alt	422712	427303	chr19_GL949753v2_alt:422712-427303	7	+	422712	422712	16724991	8	85,44,272,303,240,303,45,194,	0,233,422,841,1335,1824,4222,4397,
#Deleted in new
chr19_GL949753v2_alt	434257	439402	chr19_GL949753v2_alt:434257-439402	7	+	434257	434257	16724991	7	523,285,310,297,303,51,245,	0,686,1120,1639,2191,4701,4900,
#Deleted in new
chr19_GL949753v2_alt	434536	439249	chr19_GL949753v2_alt:434536-439249	5	+	434536	434536	16724991	7	244,285,310,297,303,51,92,	0,407,841,1360,1912,4422,4621,
#Deleted in new
chr19_GL949753v2_alt	450524	495281	chr19_GL949753v2_alt:450524-495281	3	+	450562	494768	789624	8	72,36,300,294,51,102,53,690,	0,14888,33658,35472,39036,43352,43916,44067,
#Deleted in new
chr19_GL949753v2_alt	450544	462563	chr19_GL949753v2_alt:450544-462563	3	+	450562	462120	789624	8	52,36,285,300,294,105,53,569,	0,729,1535,3093,4971,10732,11299,11450,
#Deleted in new
chr19_GL949753v2_alt	450562	495276	chr19_GL949753v2_alt:450562-495276	3	+	450562	478241	0	9	34,36,300,294,51,105,53,358,327,	0,14850,17322,19140,22602,26919,27486,27637,44387,
#Deleted in new
chr19_GL949753v2_alt	464497	478867	chr19_GL949753v2_alt:464497-478867	1	+	464586	478241	789624	7	123,36,300,294,105,53,668,	0,915,3387,5205,12984,13551,13702,
#Deleted in new
chr19_GL949753v2_alt	464567	478864	chr19_GL949753v2_alt:464567-478864	1	+	464586	478241	0	8	53,36,300,294,51,105,53,665,	0,845,3317,5135,8597,12914,13481,13632,
#Deleted in new
chr19_GL949753v2_alt	480754	495279	chr19_GL949753v2_alt:480754-495279	1	+	480768	494768	789624	8	48,36,300,294,51,102,53,688,	0,956,3428,5242,8806,13122,13686,13837,
#Deleted in new
chr19_GL949753v2_alt	480768	495281	chr19_GL949753v2_alt:480768-495281	1	+	480768	494768	789624	7	34,36,294,51,102,53,690,	0,942,5228,8792,13108,13672,13823,
#Deleted in new
chr19_GL949753v2_alt	480768	495281	chr19_GL949753v2_alt:480768-495281	1	+	480768	494768	789624	7	34,36,300,294,102,53,690,	0,942,3414,5228,13108,13672,13823,
#Deleted in new
chr19_GL949753v2_alt	497308	502746	chr19_GL949753v2_alt:497308-502746	7	+	497308	497308	16724991	5	35,36,285,300,294,	0,788,1582,3317,5144,
#Deleted in new
chr19_GL949753v2_alt	618300	625240	chr19_GL949753v2_alt:618300-625240	3	+	618338	625032	0	7	72,36,285,279,48,51,390,	0,149,373,3096,3870,6028,6550,
#Deleted in new
chr19_GL949753v2_alt	618300	625232	chr19_GL949753v2_alt:618300-625232	1	+	618338	625032	0	6	72,36,285,279,48,382,	0,149,373,3096,3870,6550,
#Deleted in new
chr19_GL949753v2_alt	618300	625232	chr19_GL949753v2_alt:618300-625232	1	+	618338	625032	0	6	72,36,279,48,51,382,	0,149,3096,3870,6028,6550,
#Deleted in new
chr19_GL949753v2_alt	618338	625032	chr19_GL949753v2_alt:618338-625032	1	+	618338	625032	0	5	34,279,48,51,182,	0,3058,3832,5990,6512,
#Deleted in new
chr19_GL949753v2_alt	635669	659666	chr19_GL949753v2_alt:635669-659666	1	-	635900	653872	0	10	364,168,171,171,171,198,1579,75,316,37,	0,6990,10060,10980,12752,14535,15379,17422,17926,23960,
#Deleted in new
chr19_GL949753v2_alt	635669	659666	chr19_GL949753v2_alt:635669-659666	3	-	635900	653872	0	11	364,171,168,171,171,171,198,1579,75,316,37,	0,4096,6990,10060,10980,12752,14535,15379,17422,17926,23960,
#Deleted in new
chr19_GL949753v2_alt	677444	713301	chr19_GL949753v2_alt:677444-713301	3	+	682176	713059	789624	13	94,297,45,72,66,1567,171,165,171,171,171,171,381,	0,4715,9216,12468,16333,16878,19763,20867,24738,25218,28985,32033,35476,
#Deleted in new
chr19_GL949753v2_alt	678503	713301	chr19_GL949753v2_alt:678503-713301	1	+	682176	713059	789624	13	125,297,45,72,66,1567,171,165,171,171,171,171,381,	0,3656,8157,11409,15274,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949753v2_alt	678503	713301	chr19_GL949753v2_alt:678503-713301	1	+	682176	713059	789624	12	125,297,45,72,1567,171,165,171,171,171,171,381,	0,3656,8157,11409,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949753v2_alt	678503	713301	chr19_GL949753v2_alt:678503-713301	1	+	682176	713059	789624	14	125,155,73,45,72,66,1567,171,165,171,171,171,171,381,	0,3656,3880,8157,11409,15274,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_GL949753v2_alt	725865	750425	chr19_GL949753v2_alt:725865-750425	1	-	726242	750397	0	8	1461,55,60,54,285,258,33,62,	0,1974,4947,11513,13873,18434,18801,24498,
#Deleted in new
chr19_GL949753v2_alt	725865	750425	chr19_GL949753v2_alt:725865-750425	3	-	727081	750397	0	7	1461,51,60,285,258,33,62,	0,1978,4947,13873,18434,18801,24498,
#Deleted in new
chr19_GL949753v2_alt	756484	775378	chr19_GL949753v2_alt:756484-775378	3	-	757234	768940	789624	7	986,102,213,105,156,119,250,	0,3063,4005,4335,12329,14833,18644,
#Deleted in new
chr19_KI270865v1_alt	221	48706	chr19_KI270865v1_alt:221-48706	1	-	806	48706	789624	31	1070,191,77,132,93,95,144,75,109,72,113,136,132,170,192,83,98,177,154,106,118,144,91,134,152,106,81,162,112,74,93,	0,1144,1500,1657,1871,2048,3110,3384,3871,4361,4554,4767,5183,5900,6596,8386,9194,9688,11376,11881,12271,14504,14833,15023,15259,15899,16307,19969,40992,43577,48392,
#Deleted in new
chr19_KI270865v1_alt	222	48832	chr19_KI270865v1_alt:222-48832	3	-	806	48706	789624	31	1069,191,77,132,93,95,144,75,109,72,113,136,132,170,192,83,98,177,154,106,118,144,91,134,152,106,81,162,112,74,219,	0,1143,1499,1656,1870,2047,3109,3383,3870,4360,4553,4766,5182,5899,6595,8385,9193,9687,11375,11880,12270,14503,14832,15022,15258,15898,16306,19968,40991,43576,48391,
#Deleted in new
chr19_KI270865v1_alt	223	24807	chr19_KI270865v1_alt:223-24807	1	-	806	24783	789624	29	1068,191,77,132,93,95,144,75,109,72,113,136,132,170,192,83,98,177,154,106,118,144,91,134,152,106,81,162,132,	0,1142,1498,1655,1869,2046,3108,3382,3869,4359,4552,4765,5181,5898,6594,8384,9192,9686,11374,11879,12269,14502,14831,15021,15257,15897,16305,19967,24452,
#Deleted in new
chr19_KI270865v1_alt	227	48832	chr19_KI270865v1_alt:227-48832	1	-	806	48706	789624	31	1064,191,77,132,93,95,144,75,109,72,113,136,132,170,192,83,98,147,154,106,118,144,91,134,152,106,81,162,112,74,219,	0,1138,1494,1651,1865,2042,3104,3378,3865,4355,4548,4761,5177,5894,6590,8380,9188,9682,11370,11875,12265,14498,14827,15017,15253,15893,16301,19963,40986,43571,48386,
#Deleted in new
chr19_KI270865v1_alt	1151	4192	chr19_KI270865v1_alt:1151-4192	0	-	1151	1151	8553170	7	140,191,464,95,144,75,100,	0,214,570,1118,2180,2454,2941,
#Deleted in new
chr19_KI270865v1_alt	2087	3649	chr19_KI270865v1_alt:2087-3649	0	-	2087	2087	8553170	3	277,144,44,	0,1244,1518,
#Deleted in new
chr19_KI270865v1_alt	7942	24807	chr19_KI270865v1_alt:7942-24807	0	-	7942	7942	8553170	14	748,98,177,154,106,118,144,91,134,152,106,81,162,132,	0,1473,1967,3655,4160,4550,6783,7112,7302,7538,8178,8586,12248,16733,
#Deleted in new
chr19_KI270865v1_alt	9982	12715	chr19_KI270865v1_alt:9982-12715	0	-	9982	9982	8553170	4	104,154,106,223,	0,1615,2120,2510,
#Deleted in new
chr19_KI270865v1_alt	20246	49566	chr19_KI270865v1_alt:20246-49566	0	-	20246	48706	789624	5	106,112,74,219,51,	0,20967,23552,28367,29269,
#Deleted in new
chr19_KI270865v1_alt	20247	48832	chr19_KI270865v1_alt:20247-48832	0	-	20247	48706	789624	4	105,112,74,219,	0,20966,23551,28366,
#Deleted in new
chr19_KI270865v1_alt	20296	48832	chr19_KI270865v1_alt:20296-48832	0	-	20296	48706	789624	4	56,112,74,219,	0,20917,23502,28317,
#Deleted in new
chr19_KI270866v1_alt	707	2382	chr19_KI270866v1_alt:707-2382	0	+	707	707	8553170	2	79,542,	0,1133,
#Deleted in new
chr19_KI270866v1_alt	707	2025	chr19_KI270866v1_alt:707-2025	0	+	707	707	8553170	2	79,185,	0,1133,
#Deleted in new
chr19_KI270866v1_alt	707	4780	chr19_KI270866v1_alt:707-4780	3	+	707	2149	789624	2	79,2940,	0,1133,
#Deleted in new
chr19_KI270866v1_alt	7678	8606	chr19_KI270866v1_alt:7678-8606	3	-	7678	7678	8553170	2	432,88,	0,840,
#Deleted in new
chr19_KI270866v1_alt	8673	15627	chr19_KI270866v1_alt:8673-15627	0	+	14101	15627	789624	4	127,210,129,91,	0,5328,5778,6863,
#Deleted in new
chr19_KI270866v1_alt	8780	16043	chr19_KI270866v1_alt:8780-16043	0	+	14101	16043	789624	5	310,210,129,91,69,	0,5221,5671,6756,7194,
#Deleted in new
chr19_KI270866v1_alt	8927	17813	chr19_KI270866v1_alt:8927-17813	0	+	14101	17813	789624	6	77,210,129,91,69,39,	0,5074,5524,6609,7047,8847,
#Deleted in new
chr19_KI270866v1_alt	13931	30733	chr19_KI270866v1_alt:13931-30733	2	+	14101	30733	789624	9	280,129,91,69,120,147,72,45,54,	0,520,1605,2043,3843,13015,14214,14798,16748,
#Deleted in new
chr19_KI270866v1_alt	14173	30733	chr19_KI270866v1_alt:14173-30733	0	+	14173	30733	789624	10	38,129,91,69,120,84,147,72,45,54,	0,278,1363,1801,3601,12541,12773,13972,14556,16506,
#Deleted in new
chr19_KI270866v1_alt	14183	27032	chr19_KI270866v1_alt:14183-27032	0	+	14183	14215	789624	7	99,129,91,69,120,84,86,	0,268,1353,1791,3591,12531,12763,
#Deleted in new
chr19_KI270866v1_alt	14190	18000	chr19_KI270866v1_alt:14190-18000	0	+	14190	14190	8553170	5	21,129,91,69,226,	0,261,1346,1784,3584,
#Deleted in new
chr19_KI270866v1_alt	14213	26790	chr19_KI270866v1_alt:14213-26790	0	+	14458	26790	789624	6	44,129,91,69,120,76,	0,238,1323,1761,3561,12501,
#Deleted in new
chr19_KI270866v1_alt	14217	30733	chr19_KI270866v1_alt:14217-30733	1	+	14458	30733	789624	9	363,91,69,120,84,147,72,45,54,	0,1319,1757,3557,12497,12729,13928,14512,16462,
#Deleted in new
chr19_KI270866v1_alt	14378	27011	chr19_KI270866v1_alt:14378-27011	0	+	14458	27011	789624	6	202,91,69,54,84,65,	0,1158,1596,3462,12336,12568,
#Deleted in new
chr19_KI270866v1_alt	14387	27044	chr19_KI270866v1_alt:14387-27044	0	+	14458	27044	789624	5	193,91,69,120,98,	0,1149,1587,3387,12559,
#Deleted in new
chr19_KI270866v1_alt	14387	27068	chr19_KI270866v1_alt:14387-27068	0	+	14458	27068	789624	5	193,91,69,84,122,	0,1149,1587,12327,12559,
#Deleted in new
chr19_KI270866v1_alt	14433	30733	chr19_KI270866v1_alt:14433-30733	0	+	14458	30733	789624	9	147,91,69,120,84,147,72,45,54,	0,1103,1541,3341,12281,12513,13712,14296,16246,
#Deleted in new
chr19_KI270866v1_alt	28189	29079	chr19_KI270866v1_alt:28189-29079	0	+	28189	28189	8553170	2	28,350,	0,540,
#Deleted in new
chr19_KI270867v1_alt	4497	8694	chr19_KI270867v1_alt:4497-8694	3	+	4497	4589	789624	2	128,1453,	0,2744,
#Deleted in new
chr19_KI270867v1_alt	4497	4592	chr19_KI270867v1_alt:4497-4592	0	+	4497	4589	789624	1	95,	0,
#Deleted in new
chr19_KI270867v1_alt	4497	7558	chr19_KI270867v1_alt:4497-7558	0	+	4497	4589	789624	2	128,297,	0,2764,
#Deleted in new
chr19_KI270867v1_alt	29037	29325	chr19_KI270867v1_alt:29037-29325	7	-	29037	29037	16724991	1	288,	0,
#Deleted in new
chr19_KI270867v1_alt	41398	42342	chr19_KI270867v1_alt:41398-42342	7	+	41398	41398	16724991	2	54,201,	0,743,
#Deleted in new
chr19_KI270867v1_alt	43101	43432	chr19_KI270867v1_alt:43101-43432	7	+	43101	43101	16724991	1	331,	0,
#Deleted in new
chr19_KI270867v1_alt	54926	63030	chr19_KI270867v1_alt:54926-63030	3	+	55037	62671	789624	7	175,360,118,53,32,42,425,	0,1114,5306,6447,6832,7363,7679,
#Deleted in new
chr19_KI270867v1_alt	54926	62456	chr19_KI270867v1_alt:54926-62456	1	+	55037	62433	789624	6	175,360,118,47,32,167,	0,1114,5306,6453,6832,7363,
#Deleted in new
chr19_KI270867v1_alt	54926	56434	chr19_KI270867v1_alt:54926-56434	0	+	54926	54926	8553170	2	175,394,	0,1114,
#Deleted in new
chr19_KI270867v1_alt	76016	79758	chr19_KI270867v1_alt:76016-79758	5	-	76016	76016	16724991	3	1144,94,310,	0,1727,3432,
#Deleted in new
chr19_KI270867v1_alt	76329	76660	chr19_KI270867v1_alt:76329-76660	7	+	76329	76329	16724991	2	130,172,	0,159,
#Deleted in new
chr19_KI270867v1_alt	76779	82266	chr19_KI270867v1_alt:76779-82266	7	-	76779	76779	16724991	3	259,316,63,	0,3694,5424,
#Deleted in new
chr19_KI270867v1_alt	95156	105766	chr19_KI270867v1_alt:95156-105766	1	-	96129	105726	789624	7	381,32,53,94,276,360,104,	0,973,1349,2401,7216,9285,10506,
#Deleted in new
chr19_KI270867v1_alt	95157	132483	chr19_KI270867v1_alt:95157-132483	3	-	96129	102688	789624	8	380,32,53,97,359,360,375,35,	0,972,1348,2400,7215,9284,21787,37291,
#Deleted in new
chr19_KI270867v1_alt	95160	105822	chr19_KI270867v1_alt:95160-105822	0	-	102579	105726	789624	7	377,32,53,94,359,360,160,	0,969,1345,2397,7212,9281,10502,
#Deleted in new
chr19_KI270867v1_alt	95190	117319	chr19_KI270867v1_alt:95190-117319	0	-	95190	95190	8553170	6	376,53,94,276,360,375,	0,1315,2367,7182,9251,21754,
#Deleted in new
chr19_KI270867v1_alt	95437	105752	chr19_KI270867v1_alt:95437-105752	1	-	96129	105726	789624	7	100,32,53,97,276,360,90,	0,692,1068,2120,6935,9004,10225,
#Deleted in new
chr19_KI270867v1_alt	116392	132483	chr19_KI270867v1_alt:116392-132483	0	-	116392	116392	8553170	3	41,375,35,	0,552,16056,
#Deleted in new
chr19_KI270867v1_alt	126538	132481	chr19_KI270867v1_alt:126538-132481	3	-	126538	126538	8553170	5	253,149,41,123,33,	0,363,1716,4160,5910,
#Deleted in new
chr19_KI270867v1_alt	126749	132481	chr19_KI270867v1_alt:126749-132481	1	-	126749	126749	8553170	6	42,149,41,76,315,33,	0,152,1505,3423,3757,5699,
#Deleted in new
chr19_KI270867v1_alt	129726	130433	chr19_KI270867v1_alt:129726-130433	3	+	129726	129726	8553170	1	707,	0,
#Deleted in new
chr19_KI270867v1_alt	131295	132481	chr19_KI270867v1_alt:131295-132481	1	-	131295	131295	8553170	2	568,33,	0,1153,
#Deleted in new
chr19_KI270867v1_alt	145096	146504	chr19_KI270867v1_alt:145096-146504	1	-	145096	145096	789624	3	307,56,104,	0,1122,1304,
#Deleted in new
chr19_KI270867v1_alt	145096	146435	chr19_KI270867v1_alt:145096-146435	1	-	145096	145096	8553170	3	304,70,35,	0,1122,1304,
#Deleted in new
chr19_KI270867v1_alt	145098	146662	chr19_KI270867v1_alt:145098-146662	1	-	145098	145098	8553170	2	305,444,	0,1120,
#Deleted in new
chr19_KI270867v1_alt	145100	146819	chr19_KI270867v1_alt:145100-146819	3	-	145100	145100	8553170	1	1719,	0,
#Deleted in new
chr19_KI270867v1_alt	158316	159056	chr19_KI270867v1_alt:158316-159056	3	-	158316	158316	8553170	2	157,289,	0,451,
#Deleted in new
chr19_KI270867v1_alt	158465	159137	chr19_KI270867v1_alt:158465-159137	1	-	158465	158465	8553170	2	452,128,	0,544,
#Deleted in new
chr19_KI270867v1_alt	168353	169300	chr19_KI270867v1_alt:168353-169300	7	+	168353	168353	16724991	2	149,745,	0,202,
#Deleted in new
chr19_KI270867v1_alt	183444	184191	chr19_KI270867v1_alt:183444-184191	7	-	183444	183444	16724991	1	747,	0,
#Deleted in new
chr19_KI270867v1_alt	189698	211262	chr19_KI270867v1_alt:189698-211262	3	+	189698	189698	8553170	3	61,888,204,	0,5217,21360,
#Deleted in new
chr19_KI270867v1_alt	189698	189759	chr19_KI270867v1_alt:189698-189759	0	+	189698	189698	8553170	1	61,	0,
#Deleted in new
chr19_KI270867v1_alt	189713	195041	chr19_KI270867v1_alt:189713-195041	0	+	189713	189713	8553170	2	46,126,	0,5202,
#Deleted in new
chr19_KI270868v1_alt	327	795	chr19_KI270868v1_alt:327-795	0	-	327	402	789624	2	101,38,	0,430,
#Deleted in new
chr19_KI270868v1_alt	327	798	chr19_KI270868v1_alt:327-798	3	-	327	402	789624	1	471,	0,
#Deleted in new
chr19_KI270868v1_alt	327	820	chr19_KI270868v1_alt:327-820	0	-	327	402	789624	2	101,63,	0,430,
#Deleted in new
chr19_KI270868v1_alt	3939	10860	chr19_KI270868v1_alt:3939-10860	1	+	7200	9829	789624	4	101,157,145,1310,	0,3133,4465,5611,
#Deleted in new
chr19_KI270868v1_alt	6678	10861	chr19_KI270868v1_alt:6678-10861	3	+	6689	10720	0	5	69,157,145,234,303,	0,394,1726,2872,3880,
#Deleted in new
chr19_KI270868v1_alt	19802	27018	chr19_KI270868v1_alt:19802-27018	3	+	19851	26812	0	5	110,166,142,231,377,	0,2501,2933,5187,6839,
#Deleted in new
chr19_KI270868v1_alt	22183	27018	chr19_KI270868v1_alt:22183-27018	1	+	22365	26812	789624	4	286,142,231,377,	0,552,2806,4458,
#Deleted in new
chr19_KI270868v1_alt	29848	35133	chr19_KI270868v1_alt:29848-35133	3	+	31215	35050	0	6	21,187,157,142,231,290,	0,1247,1914,2299,4601,4995,
#Deleted in new
chr19_KI270868v1_alt	31177	35128	chr19_KI270868v1_alt:31177-35128	1	+	31215	35050	0	5	105,157,142,231,285,	0,585,970,3272,3666,
#Deleted in new
chr19_KI270868v1_alt	38522	42509	chr19_KI270868v1_alt:38522-42509	3	+	38569	42117	0	5	102,157,145,258,539,	0,973,1217,2055,3448,
#Deleted in new
chr19_KI270868v1_alt	38543	42117	chr19_KI270868v1_alt:38543-42117	1	+	38569	42117	789624	5	102,157,145,258,147,	0,952,1196,2034,3427,
#Deleted in new
chr19_KI270868v1_alt	46855	60469	chr19_KI270868v1_alt:46855-60469	0	-	47598	60469	789624	8	870,84,217,193,134,211,207,212,	0,1233,3407,4823,6292,8087,9817,13402,
#Deleted in new
chr19_KI270868v1_alt	47078	60469	chr19_KI270868v1_alt:47078-60469	0	-	47598	60469	789624	9	647,84,217,57,193,134,211,207,212,	0,1010,3184,3753,4600,6069,7864,9594,13179,
#Deleted in new
chr19_KI270868v1_alt	47188	50292	chr19_KI270868v1_alt:47188-50292	0	-	47442	50292	789624	4	289,89,84,30,	0,448,900,3074,
#Deleted in new
chr19_KI270868v1_alt	47188	60469	chr19_KI270868v1_alt:47188-60469	0	-	47675	60469	789624	7	537,84,217,134,211,207,212,	0,900,3074,5959,7754,9484,13069,
#Deleted in new
chr19_KI270868v1_alt	47188	60469	chr19_KI270868v1_alt:47188-60469	0	-	47326	60469	789624	9	289,84,84,217,193,134,211,207,212,	0,453,900,3074,4490,5959,7754,9484,13069,
#Deleted in new
chr19_KI270868v1_alt	47189	60469	chr19_KI270868v1_alt:47189-60469	3	-	52675	60469	789624	9	536,84,217,193,97,134,211,207,212,	0,899,3073,4489,5476,5958,7753,9483,13068,
#Deleted in new
chr19_KI270868v1_alt	53234	60469	chr19_KI270868v1_alt:53234-60469	0	-	53234	60469	789624	4	47,211,207,212,	0,1708,3438,7023,
#Deleted in new
chr19_KI270868v1_alt	53234	55030	chr19_KI270868v1_alt:53234-55030	0	-	53234	55030	789624	2	47,88,	0,1708,
#Deleted in new
chr19_KI270868v1_alt	53234	60469	chr19_KI270868v1_alt:53234-60469	0	-	53234	60469	789624	3	47,211,212,	0,1708,7023,
#Deleted in new
chr19_KI270882v1_alt	6466	6573	chr19_KI270882v1_alt:6466-6573	3	+	6466	6466	8553170	1	107,	0,
#Deleted in new
chr19_KI270882v1_alt	8296	25091	chr19_KI270882v1_alt:8296-25091	3	-	8780	25058	789624	8	694,53,105,294,300,285,36,67,	0,793,1306,11299,13172,14936,15963,16728,
#Deleted in new
chr19_KI270882v1_alt	8304	25091	chr19_KI270882v1_alt:8304-25091	1	-	8780	25058	789624	9	686,53,105,51,294,300,285,36,67,	0,785,1298,8076,11291,13164,14928,15955,16720,
#Deleted in new
chr19_KI270882v1_alt	26964	41413	chr19_KI270882v1_alt:26964-41413	3	-	27586	41394	789624	8	664,53,105,51,294,300,36,32,	0,762,1277,5645,8850,10669,13417,14417,
#Deleted in new
chr19_KI270882v1_alt	43804	58241	chr19_KI270882v1_alt:43804-58241	3	-	44046	58205	789624	8	284,53,105,51,294,300,36,70,	0,382,897,5267,8471,10284,13027,14367,
#Deleted in new
chr19_KI270882v1_alt	60104	69601	chr19_KI270882v1_alt:60104-69601	3	-	60608	69601	789624	8	774,53,105,51,294,285,36,34,	0,874,1389,4256,6478,7647,8694,9463,
#Deleted in new
chr19_KI270882v1_alt	71688	86276	chr19_KI270882v1_alt:71688-86276	3	-	72253	86239	789624	10	573,51,2,106,51,294,300,285,36,71,	0,671,762,1184,5570,8791,10665,12453,13482,14517,
#Deleted in new
chr19_KI270882v1_alt	72101	86302	chr19_KI270882v1_alt:72101-86302	1	-	72367	86239	789624	9	160,51,106,51,294,300,285,36,97,	0,258,771,5157,8378,10252,12040,13069,14104,
#Deleted in new
chr19_KI270882v1_alt	72130	86250	chr19_KI270882v1_alt:72130-86250	1	-	72367	86239	789624	7	131,51,106,51,294,300,45,	0,229,742,5128,8349,10223,14075,
#Deleted in new
chr19_KI270882v1_alt	72202	86239	chr19_KI270882v1_alt:72202-86239	1	-	72367	86239	789624	8	59,51,106,51,294,300,36,34,	0,157,670,5056,8277,10151,12968,14003,
#Deleted in new
chr19_KI270882v1_alt	88223	99300	chr19_KI270882v1_alt:88223-99300	1	-	88629	99215	789624	8	676,53,105,51,294,285,36,242,	0,775,1289,5637,8276,9449,10600,10835,
#Deleted in new
chr19_KI270882v1_alt	88223	99300	chr19_KI270882v1_alt:88223-99300	1	-	88629	99098	789624	7	676,53,51,294,285,36,242,	0,775,5637,8276,9449,10600,10835,
#Deleted in new
chr19_KI270882v1_alt	88841	109700	chr19_KI270882v1_alt:88841-109700	3	-	88891	99098	789624	9	58,53,172,51,294,285,36,230,86,	0,157,604,5019,7658,8831,9982,10217,20773,
#Deleted in new
chr19_KI270882v1_alt	104464	116281	chr19_KI270882v1_alt:104464-116281	7	-	104464	104464	16724991	4	344,294,300,285,	0,7965,9782,11532,
#Deleted in new
chr19_KI270882v1_alt	104770	116279	chr19_KI270882v1_alt:104770-116279	5	-	104770	104770	16724991	4	38,294,300,283,	0,7659,9476,11226,
#Deleted in new
chr19_KI270882v1_alt	118608	132937	chr19_KI270882v1_alt:118608-132937	3	-	118930	132900	789624	8	499,53,102,51,294,300,36,71,	0,597,1112,5482,8685,10508,13258,14258,
#Deleted in new
chr19_KI270882v1_alt	118869	132926	chr19_KI270882v1_alt:118869-132926	1	-	118930	132900	789624	9	238,53,102,78,51,294,300,36,60,	0,336,851,3717,5221,8424,10247,12997,13997,
#Deleted in new
chr19_KI270882v1_alt	134874	147768	chr19_KI270882v1_alt:134874-147768	7	-	134874	134874	16724991	8	685,53,105,51,294,299,36,69,	0,783,1298,3938,7156,8973,11732,12825,
#Deleted in new
chr19_KI270882v1_alt	150121	164557	chr19_KI270882v1_alt:150121-164557	3	-	150363	164521	789624	8	284,53,105,51,294,300,36,70,	0,382,897,5266,8470,10283,13026,14366,
#Deleted in new
chr19_KI270882v1_alt	166420	175937	chr19_KI270882v1_alt:166420-175937	3	-	166924	175937	789624	8	774,53,105,51,294,285,36,34,	0,874,1389,4256,6478,7647,8694,9483,
#Deleted in new
chr19_KI270882v1_alt	177967	192496	chr19_KI270882v1_alt:177967-192496	3	-	178478	192482	0	8	688,53,102,51,294,300,36,48,	0,786,1301,5668,8993,10801,13537,14481,
#Deleted in new
chr19_KI270882v1_alt	194386	208682	chr19_KI270882v1_alt:194386-208682	3	-	195009	208663	0	8	665,53,105,51,294,300,36,53,	0,763,1278,5649,8867,10679,13415,14243,
#Deleted in new
chr19_KI270882v1_alt	210686	222705	chr19_KI270882v1_alt:210686-222705	3	-	211129	222687	789624	8	569,53,105,294,300,285,36,52,	0,667,1182,6754,8626,10199,11254,11967,
#Deleted in new
chr19_KI270882v1_alt	233730	239268	chr19_KI270882v1_alt:233730-239268	7	-	233730	233730	16724991	7	358,51,303,297,310,285,523,	0,506,3044,3602,4108,4567,5015,
#Deleted in new
chr19_KI270882v1_alt	233951	238582	chr19_KI270882v1_alt:233951-238582	5	-	233951	233951	16724991	6	137,51,303,297,310,285,	0,285,2823,3381,3887,4346,
#Deleted in new
chr19_KI270882v1_alt	242948	243232	chr19_KI270882v1_alt:242948-243232	7	-	242948	242948	16724991	1	284,	0,
#Deleted in new
chr19_KI270882v1_alt	246278	246591	chr19_KI270882v1_alt:246278-246591	7	-	246278	246278	16724991	2	138,45,	0,268,
#Deleted in new
chr19_KI270883v1_alt	1575	18370	chr19_KI270883v1_alt:1575-18370	3	-	2059	18337	789624	8	694,53,105,294,300,285,36,67,	0,793,1306,11303,13172,14936,15963,16728,
#Deleted in new
chr19_KI270883v1_alt	1583	18370	chr19_KI270883v1_alt:1583-18370	1	-	2059	18337	789624	9	686,53,105,51,294,300,285,36,67,	0,785,1298,8079,11295,13164,14928,15955,16720,
#Deleted in new
chr19_KI270883v1_alt	20525	36050	chr19_KI270883v1_alt:20525-36050	3	-	20865	36043	789624	8	382,53,105,51,272,300,36,41,	0,480,995,5365,8583,10407,13168,15484,
#Deleted in new
chr19_KI270883v1_alt	38029	52335	chr19_KI270883v1_alt:38029-52335	3	-	38532	52308	789624	9	680,53,105,51,294,300,285,36,61,	0,798,1313,5701,8921,10767,12180,13210,14245,
#Deleted in new
chr19_KI270883v1_alt	54291	65239	chr19_KI270883v1_alt:54291-65239	1	-	55107	65198	789624	8	676,53,104,51,294,285,36,81,	0,775,1289,5635,8274,9447,10632,10867,
#Deleted in new
chr19_KI270883v1_alt	54292	65315	chr19_KI270883v1_alt:54292-65315	1	-	54697	65315	789624	8	675,54,104,51,294,285,36,157,	0,774,1288,5634,8273,9446,10631,10866,
#Deleted in new
chr19_KI270883v1_alt	54295	65400	chr19_KI270883v1_alt:54295-65400	3	-	54697	65198	789624	8	672,53,171,51,294,285,36,242,	0,771,1218,5631,8270,9443,10628,10863,
#Deleted in new
chr19_KI270883v1_alt	54295	65210	chr19_KI270883v1_alt:54295-65210	1	-	54697	65198	789624	6	672,53,294,285,36,52,	0,771,8270,9443,10628,10863,
#Deleted in new
chr19_KI270883v1_alt	63458	65480	chr19_KI270883v1_alt:63458-65480	0	-	63458	63458	8553170	3	565,36,322,	0,1465,1700,
#Deleted in new
chr19_KI270883v1_alt	70553	82376	chr19_KI270883v1_alt:70553-82376	7	-	70553	70553	16724991	4	344,294,300,285,	0,7967,9788,11538,
#Deleted in new
chr19_KI270883v1_alt	78520	82484	chr19_KI270883v1_alt:78520-82484	5	-	78520	78520	16724991	3	294,300,34,	0,1821,3930,
#Deleted in new
chr19_KI270883v1_alt	84516	99020	chr19_KI270883v1_alt:84516-99020	3	-	85025	98988	789624	8	686,53,102,51,294,300,36,66,	0,784,1299,5660,8864,10690,13438,14438,
#Deleted in new
chr19_KI270883v1_alt	84964	99014	chr19_KI270883v1_alt:84964-99014	1	-	85025	98988	789624	9	238,53,102,78,51,294,300,36,60,	0,336,851,3708,5212,8416,10242,12990,13990,
#Deleted in new
chr19_KI270883v1_alt	100958	113853	chr19_KI270883v1_alt:100958-113853	7	-	100958	100958	16724991	8	686,53,105,51,294,299,36,71,	0,784,1299,3939,7155,8974,11731,12824,
#Deleted in new
chr19_KI270883v1_alt	115786	130311	chr19_KI270883v1_alt:115786-130311	3	-	116319	130274	0	8	686,53,105,51,294,300,36,71,	0,784,1299,5667,8964,10773,13510,14454,
#Deleted in new
chr19_KI270883v1_alt	132690	144329	chr19_KI270883v1_alt:132690-144329	3	-	132721	144279	789624	8	157,53,105,294,300,285,36,84,	0,255,770,6342,8214,9787,10842,11555,
#Deleted in new
chr19_KI270883v1_alt	155322	160860	chr19_KI270883v1_alt:155322-160860	7	-	155322	155322	16724991	7	358,51,303,297,310,285,523,	0,506,3044,3602,4108,4567,5015,
#Deleted in new
chr19_KI270883v1_alt	155543	160174	chr19_KI270883v1_alt:155543-160174	5	-	155543	155543	16724991	6	137,51,303,297,310,285,	0,285,2823,3381,3887,4346,
#Deleted in new
chr19_KI270883v1_alt	164540	164824	chr19_KI270883v1_alt:164540-164824	7	-	164540	164540	16724991	1	284,	0,
#Deleted in new
chr19_KI270883v1_alt	167870	168183	chr19_KI270883v1_alt:167870-168183	7	-	167870	167870	16724991	2	138,45,	0,268,
#Deleted in new
chr19_KI270884v1_alt	194	301	chr19_KI270884v1_alt:194-301	3	+	194	194	8553170	1	107,	0,
#Deleted in new
chr19_KI270884v1_alt	2032	18762	chr19_KI270884v1_alt:2032-18762	3	-	2508	18732	789624	9	686,53,105,51,294,300,285,36,64,	0,785,1298,8077,11295,13168,14932,15959,16666,
#Deleted in new
chr19_KI270884v1_alt	2279	18732	chr19_KI270884v1_alt:2279-18732	1	-	2508	18732	789624	8	439,53,105,294,300,285,36,34,	0,538,1051,11048,12921,14685,15712,16419,
#Deleted in new
chr19_KI270884v1_alt	21261	36251	chr19_KI270884v1_alt:21261-36251	3	-	21261	36244	8553170	8	42,53,105,51,272,300,36,41,	0,140,655,5023,8241,10065,12825,14949,
#Deleted in new
chr19_KI270884v1_alt	21986	36244	chr19_KI270884v1_alt:21986-36244	0	-	21986	36244	789624	5	35,272,300,36,34,	0,7516,9340,12100,14224,
#Deleted in new
chr19_KI270884v1_alt	38230	52539	chr19_KI270884v1_alt:38230-52539	3	-	38733	52512	789624	9	680,53,105,51,294,300,285,36,61,	0,798,1313,5701,8921,10767,12180,13209,14248,
#Deleted in new
chr19_KI270884v1_alt	38231	52536	chr19_KI270884v1_alt:38231-52536	1	-	38733	52512	789624	8	679,53,105,294,300,285,36,58,	0,797,1312,8920,10766,12179,13208,14247,
#Deleted in new
chr19_KI270884v1_alt	54496	65406	chr19_KI270884v1_alt:54496-65406	3	-	54902	65365	789624	8	676,53,105,51,294,285,36,81,	0,775,1289,5637,8276,9443,10594,10829,
#Deleted in new
chr19_KI270884v1_alt	54496	65365	chr19_KI270884v1_alt:54496-65365	1	-	54902	65365	789624	7	676,53,105,294,285,36,40,	0,775,1289,8276,9443,10594,10829,
#Deleted in new
chr19_KI270884v1_alt	54497	65405	chr19_KI270884v1_alt:54497-65405	1	-	54902	65365	789624	7	675,53,51,294,285,36,80,	0,774,5636,8275,9442,10593,10828,
#Deleted in new
chr19_KI270884v1_alt	54500	65377	chr19_KI270884v1_alt:54500-65377	1	-	54902	65365	789624	6	672,53,294,285,36,52,	0,771,8272,9439,10590,10825,
#Deleted in new
chr19_KI270884v1_alt	55114	65567	chr19_KI270884v1_alt:55114-65567	1	-	55164	65365	789624	8	58,53,172,51,294,285,36,242,	0,157,604,5019,7658,8825,9976,10211,
#Deleted in new
chr19_KI270884v1_alt	70733	84136	chr19_KI270884v1_alt:70733-84136	7	-	70733	70733	16724991	6	344,294,300,285,36,35,	0,7965,9786,11536,12579,13368,
#Deleted in new
chr19_KI270884v1_alt	78698	84147	chr19_KI270884v1_alt:78698-84147	5	-	78698	78698	16724991	5	294,300,285,36,46,	0,1821,3571,4614,5403,
#Deleted in new
chr19_KI270884v1_alt	86167	100767	chr19_KI270884v1_alt:86167-100767	3	-	86676	100678	0	8	686,53,102,51,294,300,36,123,	0,784,1299,5666,8989,10797,13533,14477,
#Deleted in new
chr19_KI270884v1_alt	102708	116870	chr19_KI270884v1_alt:102708-116870	3	-	103205	116859	789624	7	539,53,105,51,294,36,45,	0,637,1152,5523,8741,13289,14117,
#Deleted in new
chr19_KI270884v1_alt	102749	116869	chr19_KI270884v1_alt:102749-116869	1	-	103205	116859	0	8	498,53,105,51,294,300,36,44,	0,596,1111,5482,8700,10512,13248,14076,
#Deleted in new
chr19_KI270884v1_alt	103011	116859	chr19_KI270884v1_alt:103011-116859	1	-	103205	116859	789624	7	236,53,105,294,300,36,34,	0,334,849,8438,10250,12986,13814,
#Deleted in new
chr19_KI270884v1_alt	118882	130976	chr19_KI270884v1_alt:118882-130976	3	-	119325	130926	789624	8	569,53,105,294,300,285,36,84,	0,667,1182,6754,8630,10203,11258,12010,
#Deleted in new
chr19_KI270884v1_alt	142084	147507	chr19_KI270884v1_alt:142084-147507	7	-	142084	142084	16724991	7	245,51,303,297,310,285,523,	0,393,2931,3487,3993,4452,4900,
#Deleted in new
chr19_KI270884v1_alt	142192	146821	chr19_KI270884v1_alt:142192-146821	5	-	142192	142192	16724991	6	137,51,303,297,310,285,	0,285,2823,3379,3885,4344,
#Deleted in new
chr19_KI270884v1_alt	151194	151478	chr19_KI270884v1_alt:151194-151478	7	-	151194	151194	16724991	1	284,	0,
#Deleted in new
chr19_KI270884v1_alt	154524	154837	chr19_KI270884v1_alt:154524-154837	7	-	154524	154524	16724991	2	138,45,	0,268,
#Deleted in new
chr19_KI270885v1_alt	320	427	chr19_KI270885v1_alt:320-427	3	+	320	320	8553170	1	107,	0,
#Deleted in new
chr19_KI270885v1_alt	2150	18909	chr19_KI270885v1_alt:2150-18909	3	-	2634	18876	789624	8	694,53,105,294,300,285,36,67,	0,793,1306,11301,13174,14938,15965,16692,
#Deleted in new
chr19_KI270885v1_alt	2158	18909	chr19_KI270885v1_alt:2158-18909	1	-	2634	18876	789624	9	686,53,105,51,294,300,285,36,67,	0,785,1298,8076,11293,13166,14930,15957,16684,
#Deleted in new
chr19_KI270885v1_alt	20781	36697	chr19_KI270885v1_alt:20781-36697	3	-	21407	36608	0	8	668,53,105,51,294,300,36,123,	0,766,1281,5651,8870,10716,13477,15793,
#Deleted in new
chr19_KI270885v1_alt	38595	52899	chr19_KI270885v1_alt:38595-52899	3	-	39097	52875	789624	8	679,53,105,294,300,285,36,58,	0,797,1312,8919,10765,12178,13207,14246,
#Deleted in new
chr19_KI270885v1_alt	38635	52938	chr19_KI270885v1_alt:38635-52938	1	-	39097	52875	789624	9	639,53,105,51,294,300,285,36,97,	0,757,1272,5659,8879,10725,12138,13167,14206,
#Deleted in new
chr19_KI270885v1_alt	54859	65809	chr19_KI270885v1_alt:54859-65809	3	-	55265	65768	789624	8	676,53,105,51,294,285,36,81,	0,775,1289,5636,8282,9449,10634,10869,
#Deleted in new
chr19_KI270885v1_alt	54863	65780	chr19_KI270885v1_alt:54863-65780	1	-	55265	65768	789624	7	672,53,105,294,285,36,52,	0,771,1285,8278,9445,10630,10865,
#Deleted in new
chr19_KI270885v1_alt	55254	65768	chr19_KI270885v1_alt:55254-65768	1	-	55265	65768	789624	7	281,53,51,294,285,36,40,	0,380,5241,7887,9054,10239,10474,
#Deleted in new
chr19_KI270885v1_alt	55477	65970	chr19_KI270885v1_alt:55477-65970	1	-	55527	65768	789624	8	58,53,172,51,294,285,36,242,	0,157,604,5018,7664,8831,10016,10251,
#Deleted in new
chr19_KI270885v1_alt	64028	66050	chr19_KI270885v1_alt:64028-66050	0	-	64028	64028	8553170	3	565,36,322,	0,1465,1700,
#Deleted in new
chr19_KI270885v1_alt	71122	82945	chr19_KI270885v1_alt:71122-82945	7	-	71122	71122	16724991	4	344,294,300,285,	0,7967,9788,11538,
#Deleted in new
chr19_KI270885v1_alt	79089	83053	chr19_KI270885v1_alt:79089-83053	5	-	79089	79089	16724991	3	294,300,34,	0,1821,3930,
#Deleted in new
chr19_KI270885v1_alt	85085	99589	chr19_KI270885v1_alt:85085-99589	3	-	85594	99557	789624	8	686,53,102,51,294,300,36,66,	0,784,1299,5660,8864,10690,13438,14438,
#Deleted in new
chr19_KI270885v1_alt	85533	99583	chr19_KI270885v1_alt:85533-99583	1	-	85594	99557	789624	9	238,53,102,78,51,294,300,36,60,	0,336,851,3708,5212,8416,10242,12990,13990,
#Deleted in new
chr19_KI270885v1_alt	101939	114385	chr19_KI270885v1_alt:101939-114385	7	-	101939	101939	16724991	8	274,53,105,51,294,299,36,34,	0,372,887,3527,6743,8562,11319,12412,
#Deleted in new
chr19_KI270885v1_alt	116659	130943	chr19_KI270885v1_alt:116659-130943	3	-	116888	130854	0	8	382,53,105,51,294,300,36,123,	0,480,995,5363,8652,10461,13198,14161,
#Deleted in new
chr19_KI270885v1_alt	133272	144952	chr19_KI270885v1_alt:133272-144952	3	-	133303	144902	789624	8	157,53,105,294,300,285,36,84,	0,255,770,6340,8216,9789,10844,11596,
#Deleted in new
chr19_KI270885v1_alt	155950	161488	chr19_KI270885v1_alt:155950-161488	7	-	155950	155950	16724991	7	358,51,303,297,310,285,523,	0,506,3044,3602,4108,4567,5015,
#Deleted in new
chr19_KI270885v1_alt	156171	160802	chr19_KI270885v1_alt:156171-160802	5	-	156171	156171	16724991	6	137,51,303,297,310,285,	0,285,2823,3381,3887,4346,
#Deleted in new
chr19_KI270885v1_alt	165168	165452	chr19_KI270885v1_alt:165168-165452	7	-	165168	165168	16724991	1	284,	0,
#Deleted in new
chr19_KI270885v1_alt	168498	168811	chr19_KI270885v1_alt:168498-168811	7	-	168498	168498	16724991	2	138,45,	0,268,
#Deleted in new
chr19_KI270886v1_alt	11027	25442	chr19_KI270886v1_alt:11027-25442	7	-	11027	11027	16724991	7	54,105,51,272,300,36,41,	0,516,4884,8102,9926,12686,14374,
#Deleted in new
chr19_KI270886v1_alt	27421	41730	chr19_KI270886v1_alt:27421-41730	3	-	27924	41703	789624	9	680,53,105,51,294,300,285,36,61,	0,798,1313,5701,8921,10767,12180,13209,14248,
#Deleted in new
chr19_KI270886v1_alt	27422	41727	chr19_KI270886v1_alt:27422-41727	1	-	27924	41703	789624	8	679,53,105,294,300,285,36,58,	0,797,1312,8920,10766,12179,13208,14247,
#Deleted in new
chr19_KI270886v1_alt	43687	54583	chr19_KI270886v1_alt:43687-54583	3	-	44093	54556	789624	8	676,53,105,51,294,285,36,67,	0,775,1289,5637,8276,9443,10594,10829,
#Deleted in new
chr19_KI270886v1_alt	67889	71783	chr19_KI270886v1_alt:67889-71783	7	-	67889	67889	16724991	3	294,300,327,	0,1817,3567,
#Deleted in new
chr19_KI270886v1_alt	73881	88381	chr19_KI270886v1_alt:73881-88381	3	-	74390	88361	789624	8	686,53,102,51,294,300,36,54,	0,784,1299,5669,8872,10695,13446,14446,
#Deleted in new
chr19_KI270886v1_alt	90846	103162	chr19_KI270886v1_alt:90846-103162	7	-	90846	90846	16724991	8	174,53,105,51,294,299,36,2,	0,272,787,3427,6645,8462,11221,12314,
#Deleted in new
chr19_KI270886v1_alt	105807	120041	chr19_KI270886v1_alt:105807-120041	3	-	105824	119982	789624	8	59,53,105,51,294,300,36,93,	0,157,672,5041,8245,10058,12801,14141,
#Deleted in new
chr19_KI270886v1_alt	121972	131453	chr19_KI270886v1_alt:121972-131453	3	-	122385	131398	8553170	8	683,53,105,51,294,285,36,89,	0,783,1298,4165,6387,7556,8603,9392,
#Deleted in new
chr19_KI270886v1_alt	133428	147923	chr19_KI270886v1_alt:133428-147923	3	-	133939	147909	0	8	688,53,102,51,294,300,36,48,	0,786,1301,5668,8959,10767,13503,14447,
#Deleted in new
chr19_KI270886v1_alt	149813	164109	chr19_KI270886v1_alt:149813-164109	3	-	150436	164090	0	8	665,53,105,51,294,300,36,53,	0,763,1278,5649,8867,10679,13415,14243,
#Deleted in new
chr19_KI270886v1_alt	166113	178131	chr19_KI270886v1_alt:166113-178131	3	-	166556	178113	789624	8	569,53,105,294,300,285,36,52,	0,667,1182,6753,8625,10198,11253,11966,
#Deleted in new
chr19_KI270887v1_alt	12141	12248	chr19_KI270887v1_alt:12141-12248	3	+	12141	12141	8553170	1	107,	0,
#Deleted in new
chr19_KI270887v1_alt	13971	30766	chr19_KI270887v1_alt:13971-30766	3	-	14455	30733	789624	8	694,53,105,294,300,285,36,67,	0,793,1306,11299,13172,14936,15963,16728,
#Deleted in new
chr19_KI270887v1_alt	13979	30763	chr19_KI270887v1_alt:13979-30763	1	-	14455	30733	789624	9	686,53,105,51,294,300,285,36,64,	0,785,1298,8076,11291,13164,14928,15955,16720,
#Deleted in new
chr19_KI270887v1_alt	32635	47179	chr19_KI270887v1_alt:32635-47179	3	-	33261	47090	789624	8	668,53,105,51,294,300,36,123,	0,766,1281,5649,8854,10673,13421,14421,
#Deleted in new
chr19_KI270887v1_alt	49479	63939	chr19_KI270887v1_alt:49479-63939	3	-	49721	63880	789624	8	284,53,105,51,294,300,36,93,	0,382,897,5267,8471,10284,13027,14367,
#Deleted in new
chr19_KI270887v1_alt	65779	75331	chr19_KI270887v1_alt:65779-75331	3	-	66283	75276	789624	8	774,53,105,51,294,285,36,89,	0,874,1389,4256,6478,7647,8694,9463,
#Deleted in new
chr19_KI270887v1_alt	77363	91952	chr19_KI270887v1_alt:77363-91952	3	-	77928	91915	789624	10	573,51,2,106,51,294,300,285,36,71,	0,671,762,1184,5570,8791,10665,12453,13482,14518,
#Deleted in new
chr19_KI270887v1_alt	77466	91978	chr19_KI270887v1_alt:77466-91978	1	-	78042	91915	789624	9	470,51,106,51,294,300,285,36,97,	0,568,1081,5467,8688,10562,12350,13379,14415,
#Deleted in new
chr19_KI270887v1_alt	93899	104976	chr19_KI270887v1_alt:93899-104976	1	-	94305	104774	789624	7	676,53,51,294,285,36,242,	0,775,5637,8276,9449,10600,10835,
#Deleted in new
chr19_KI270887v1_alt	93903	104786	chr19_KI270887v1_alt:93903-104786	3	-	94305	104774	789624	8	672,53,105,51,294,285,36,52,	0,771,1285,5633,8272,9445,10596,10831,
#Deleted in new
chr19_KI270887v1_alt	110453	121960	chr19_KI270887v1_alt:110453-121960	7	-	110453	110453	16724991	4	31,294,300,283,	0,7653,9474,11224,
#Deleted in new
chr19_KI270887v1_alt	124098	138614	chr19_KI270887v1_alt:124098-138614	3	-	124611	138574	789624	8	690,53,102,51,294,300,36,74,	0,788,1303,5664,8868,10694,13442,14442,
#Deleted in new
chr19_KI270887v1_alt	141056	153402	chr19_KI270887v1_alt:141056-153402	7	-	141056	141056	16724991	8	174,53,105,51,294,299,36,34,	0,272,787,3427,6643,8462,11219,12312,
#Deleted in new
chr19_KI270887v1_alt	155372	169871	chr19_KI270887v1_alt:155372-169871	3	-	155905	169858	0	8	686,53,105,51,294,300,36,47,	0,784,1299,5667,8962,10771,13508,14452,
#Deleted in new
chr19_KI270887v1_alt	171865	183926	chr19_KI270887v1_alt:171865-183926	3	-	172305	183908	789624	8	566,53,105,294,300,285,36,52,	0,664,1179,6753,8629,10202,11257,12009,
#Deleted in new
chr19_KI270887v1_alt	194951	199966	chr19_KI270887v1_alt:194951-199966	7	-	194951	194951	16724991	7	358,51,303,297,311,285,523,	0,506,2522,3078,3584,4044,4492,
#Deleted in new
chr19_KI270887v1_alt	197474	198779	chr19_KI270887v1_alt:197474-198779	5	-	197474	197474	16724991	3	302,297,244,	0,555,1061,
#Deleted in new
chr19_KI270888v1_alt	1714	18474	chr19_KI270888v1_alt:1714-18474	3	-	2198	18441	789624	8	694,53,105,294,300,285,36,67,	0,793,1306,11302,13175,14939,15966,16693,
#Deleted in new
chr19_KI270888v1_alt	1722	18471	chr19_KI270888v1_alt:1722-18471	1	-	2198	18441	789624	9	686,53,105,51,294,300,285,36,64,	0,785,1298,8077,11294,13167,14931,15958,16685,
#Deleted in new
chr19_KI270888v1_alt	20343	34826	chr19_KI270888v1_alt:20343-34826	3	-	20972	34728	0	8	671,53,105,51,294,300,36,123,	0,769,1284,5654,8873,10719,13480,14360,
#Deleted in new
chr19_KI270888v1_alt	36724	51067	chr19_KI270888v1_alt:36724-51067	1	-	37226	51004	789624	8	679,53,105,294,300,285,36,97,	0,797,1312,8919,10765,12178,13207,14246,
#Deleted in new
chr19_KI270888v1_alt	36724	51067	chr19_KI270888v1_alt:36724-51067	3	-	37226	51004	789624	9	679,53,105,51,294,300,285,36,97,	0,797,1312,5699,8919,10765,12178,13207,14246,
#Deleted in new
chr19_KI270888v1_alt	52988	64087	chr19_KI270888v1_alt:52988-64087	3	-	53394	63897	789624	8	676,53,105,51,294,285,36,230,	0,775,1289,5636,8282,9449,10634,10869,
#Deleted in new
chr19_KI270888v1_alt	69251	82656	chr19_KI270888v1_alt:69251-82656	3	-	69557	82655	789624	6	344,294,300,285,36,35,	0,7967,9788,11538,12581,13370,
#Deleted in new
chr19_KI270888v1_alt	84687	99229	chr19_KI270888v1_alt:84687-99229	3	-	85196	99198	789624	8	686,53,102,51,294,300,36,65,	0,784,1299,5666,8989,10797,13533,14477,
#Deleted in new
chr19_KI270888v1_alt	101206	115411	chr19_KI270888v1_alt:101206-115411	3	-	101725	115380	0	8	561,53,105,51,294,300,36,65,	0,659,1174,5545,8764,10576,13312,14140,
#Deleted in new
chr19_KI270888v1_alt	117282	129431	chr19_KI270888v1_alt:117282-129431	3	-	117846	129413	789624	8	690,53,105,294,300,285,36,52,	0,788,1303,6880,8756,10329,11384,12097,
#Deleted in new
chr19_KI270888v1_alt	140573	145996	chr19_KI270888v1_alt:140573-145996	7	-	140573	140573	16724991	7	245,51,303,297,310,285,523,	0,393,2931,3487,3993,4452,4900,
#Deleted in new
chr19_KI270888v1_alt	144589	145771	chr19_KI270888v1_alt:144589-145771	5	-	144589	144589	16724991	3	287,285,298,	0,436,884,
#Deleted in new
chr19_KI270889v1_alt	11	118	chr19_KI270889v1_alt:11-118	3	+	11	11	8553170	1	107,	0,
#Deleted in new
chr19_KI270889v1_alt	1841	18600	chr19_KI270889v1_alt:1841-18600	3	-	2325	18567	789624	8	694,53,105,294,300,285,36,67,	0,793,1306,11301,13174,14938,15965,16692,
#Deleted in new
chr19_KI270889v1_alt	1849	18597	chr19_KI270889v1_alt:1849-18597	1	-	2325	18567	789624	9	686,53,105,51,294,300,285,36,64,	0,785,1298,8076,11293,13166,14930,15957,16684,
#Deleted in new
chr19_KI270889v1_alt	20472	36388	chr19_KI270889v1_alt:20472-36388	3	-	21098	36299	0	8	668,53,105,51,294,300,36,123,	0,766,1281,5651,8870,10716,13477,15793,
#Deleted in new
chr19_KI270889v1_alt	38285	52593	chr19_KI270889v1_alt:38285-52593	3	-	38788	52566	789624	9	680,53,105,51,294,300,285,36,61,	0,798,1313,5700,8920,10766,12179,13208,14247,
#Deleted in new
chr19_KI270889v1_alt	38286	52590	chr19_KI270889v1_alt:38286-52590	1	-	38788	52566	789624	8	679,53,105,294,300,285,36,58,	0,797,1312,8919,10765,12178,13207,14246,
#Deleted in new
chr19_KI270889v1_alt	54551	65459	chr19_KI270889v1_alt:54551-65459	3	-	54956	65459	789624	8	675,53,105,51,294,285,36,40,	0,774,1288,5635,8281,9448,10633,10868,
#Deleted in new
chr19_KI270889v1_alt	71122	82638	chr19_KI270889v1_alt:71122-82638	7	-	71122	71122	16724991	4	35,294,300,287,	0,7658,9479,11229,
#Deleted in new
chr19_KI270889v1_alt	84772	99274	chr19_KI270889v1_alt:84772-99274	3	-	85285	99248	789624	8	690,53,102,51,294,300,36,60,	0,788,1303,5664,8868,10694,13442,14442,
#Deleted in new
chr19_KI270889v1_alt	101727	114076	chr19_KI270889v1_alt:101727-114076	7	-	101727	101727	16724991	8	177,53,105,51,294,299,36,34,	0,275,790,3430,6646,8465,11222,12315,
#Deleted in new
chr19_KI270889v1_alt	116046	130563	chr19_KI270889v1_alt:116046-130563	3	-	116579	130532	0	8	686,53,105,51,294,300,36,65,	0,784,1299,5667,8962,10771,13508,14452,
#Deleted in new
chr19_KI270889v1_alt	132540	144596	chr19_KI270889v1_alt:132540-144596	3	-	132980	144578	789624	8	566,53,105,294,300,285,36,52,	0,664,1179,6748,8624,10197,11252,12004,
#Deleted in new
chr19_KI270890v1_alt	0	107	chr19_KI270890v1_alt:0-107	3	+	0	0	8553170	1	107,	0,
#Deleted in new
chr19_KI270890v1_alt	1830	18625	chr19_KI270890v1_alt:1830-18625	1	-	2314	18592	789624	8	694,53,105,294,300,285,36,67,	0,793,1306,11299,13172,14936,15963,16728,
#Deleted in new
chr19_KI270890v1_alt	1838	18622	chr19_KI270890v1_alt:1838-18622	3	-	2314	18592	789624	9	686,53,105,51,294,300,285,36,64,	0,785,1298,8076,11291,13164,14928,15955,16720,
#Deleted in new
chr19_KI270890v1_alt	20752	34989	chr19_KI270890v1_alt:20752-34989	3	-	21120	34949	789624	8	410,53,105,51,294,300,36,74,	0,508,1023,5391,8596,10415,13163,14163,
#Deleted in new
chr19_KI270890v1_alt	36928	51949	chr19_KI270890v1_alt:36928-51949	3	-	37580	51915	8553170	8	694,53,105,51,294,300,36,68,	0,792,1307,5677,8875,10697,13441,14953,
#Deleted in new
chr19_KI270890v1_alt	53905	63370	chr19_KI270890v1_alt:53905-63370	3	-	54318	63315	789624	8	683,53,105,51,294,285,36,89,	0,783,1298,4168,6391,7560,8607,9376,
#Deleted in new
chr19_KI270890v1_alt	65402	79990	chr19_KI270890v1_alt:65402-79990	3	-	65967	79953	789624	10	573,51,2,106,51,294,300,285,36,71,	0,671,762,1184,5570,8791,10665,12453,13482,14517,
#Deleted in new
chr19_KI270890v1_alt	65505	79986	chr19_KI270890v1_alt:65505-79986	1	-	66081	79953	789624	9	470,51,106,51,294,300,285,36,67,	0,568,1081,5467,8688,10562,12350,13379,14414,
#Deleted in new
chr19_KI270890v1_alt	81937	93014	chr19_KI270890v1_alt:81937-93014	3	-	82343	92812	789624	7	676,53,51,294,285,36,242,	0,775,5637,8276,9449,10600,10835,
#Deleted in new
chr19_KI270890v1_alt	81941	92812	chr19_KI270890v1_alt:81941-92812	1	-	82343	92812	789624	8	672,53,105,51,294,285,36,40,	0,771,1285,5633,8272,9445,10596,10831,
#Deleted in new
chr19_KI270890v1_alt	98178	111582	chr19_KI270890v1_alt:98178-111582	3	-	98484	111581	789624	6	344,294,300,285,36,35,	0,7966,9787,11537,12580,13369,
#Deleted in new
chr19_KI270890v1_alt	113613	128147	chr19_KI270890v1_alt:113613-128147	3	-	114122	128116	789624	8	686,53,102,51,294,300,36,65,	0,784,1299,5666,8981,10789,13525,14469,
#Deleted in new
chr19_KI270890v1_alt	130020	144329	chr19_KI270890v1_alt:130020-144329	3	-	130643	144298	0	8	665,53,105,51,294,300,36,65,	0,763,1278,5649,8868,10680,13416,14244,
#Deleted in new
chr19_KI270890v1_alt	146204	158395	chr19_KI270890v1_alt:146204-158395	3	-	146764	158365	789624	8	686,53,105,294,300,285,36,64,	0,784,1299,6871,8747,10320,11375,12127,
#Deleted in new
chr19_KI270890v1_alt	169422	174960	chr19_KI270890v1_alt:169422-174960	7	-	169422	169422	16724991	7	358,51,303,297,310,285,523,	0,506,3044,3602,4108,4567,5015,
#Deleted in new
chr19_KI270890v1_alt	169643	174274	chr19_KI270890v1_alt:169643-174274	5	-	169643	169643	16724991	6	137,51,303,297,310,285,	0,285,2823,3381,3887,4346,
#Deleted in new
chr19_KI270890v1_alt	178640	178924	chr19_KI270890v1_alt:178640-178924	7	-	178640	178640	16724991	1	284,	0,
#Deleted in new
chr19_KI270890v1_alt	181970	182283	chr19_KI270890v1_alt:181970-182283	7	-	181970	181970	16724991	2	138,45,	0,268,
#Deleted in new
chr19_KI270891v1_alt	11	118	chr19_KI270891v1_alt:11-118	3	+	11	11	8553170	1	107,	0,
#Deleted in new
chr19_KI270891v1_alt	1841	18614	chr19_KI270891v1_alt:1841-18614	3	-	2325	18581	789624	8	694,53,105,294,300,285,36,67,	0,793,1306,11300,13169,14933,15960,16706,
#Deleted in new
chr19_KI270891v1_alt	1849	18611	chr19_KI270891v1_alt:1849-18611	1	-	2325	18581	789624	9	686,53,105,51,294,300,285,36,64,	0,785,1298,8077,11292,13161,14925,15952,16698,
#Deleted in new
chr19_KI270891v1_alt	20772	36403	chr19_KI270891v1_alt:20772-36403	3	-	21112	36314	0	8	382,53,105,51,294,300,36,123,	0,480,995,5365,8585,10431,13192,15508,
#Deleted in new
chr19_KI270891v1_alt	38300	52606	chr19_KI270891v1_alt:38300-52606	1	-	38803	52581	789624	9	680,53,105,51,294,300,285,36,59,	0,798,1313,5700,8920,10766,12179,13208,14247,
#Deleted in new
chr19_KI270891v1_alt	38301	52605	chr19_KI270891v1_alt:38301-52605	3	-	38803	52581	789624	8	679,53,105,294,300,285,36,58,	0,797,1312,8919,10765,12178,13207,14246,
#Deleted in new
chr19_KI270891v1_alt	54777	65492	chr19_KI270891v1_alt:54777-65492	3	-	54971	65474	789624	8	464,53,105,51,294,285,36,58,	0,563,1077,5424,8070,9237,10422,10657,
#Deleted in new
chr19_KI270891v1_alt	78796	82797	chr19_KI270891v1_alt:78796-82797	7	-	78796	78796	16724991	3	294,336,71,	0,1821,3930,
#Deleted in new
chr19_KI270891v1_alt	85096	99353	chr19_KI270891v1_alt:85096-99353	3	-	85301	99264	789624	8	382,53,102,51,294,300,36,123,	0,480,995,5356,8560,10386,13134,14134,
#Deleted in new
chr19_KI270891v1_alt	102533	114129	chr19_KI270891v1_alt:102533-114129	7	-	102533	102533	16724991	6	105,51,294,299,36,71,	0,2640,5856,7675,10432,11525,
#Deleted in new
chr19_KI270891v1_alt	116063	130587	chr19_KI270891v1_alt:116063-130587	3	-	116596	130550	0	8	686,53,105,51,294,300,36,71,	0,784,1299,5668,8963,10772,13509,14453,
#Deleted in new
chr19_KI270891v1_alt	132965	144604	chr19_KI270891v1_alt:132965-144604	3	-	132996	144554	789624	8	157,53,105,294,300,285,36,84,	0,255,770,6342,8214,9787,10842,11555,
#Deleted in new
chr19_KI270891v1_alt	155603	161141	chr19_KI270891v1_alt:155603-161141	7	-	155603	155603	16724991	7	358,51,303,297,310,285,523,	0,506,3044,3602,4108,4567,5015,
#Deleted in new
chr19_KI270891v1_alt	155824	160455	chr19_KI270891v1_alt:155824-160455	5	-	155824	155824	16724991	6	137,51,303,297,310,285,	0,285,2823,3381,3887,4346,
#Deleted in new
chr19_KI270891v1_alt	164821	165105	chr19_KI270891v1_alt:164821-165105	7	-	164821	164821	16724991	1	284,	0,
#Deleted in new
chr19_KI270891v1_alt	168151	168464	chr19_KI270891v1_alt:168151-168464	7	-	168151	168151	16724991	2	138,45,	0,268,
#Deleted in new
chr19_KI270914v1_alt	10671	26251	chr19_KI270914v1_alt:10671-26251	3	-	11027	26205	789624	8	398,53,105,51,272,300,36,80,	0,496,1011,5381,8599,10423,13184,15500,
#Deleted in new
chr19_KI270914v1_alt	28191	42497	chr19_KI270914v1_alt:28191-42497	3	-	28694	42470	789624	9	680,53,105,51,294,300,285,36,61,	0,798,1313,5701,8921,10767,12180,13210,14245,
#Deleted in new
chr19_KI270914v1_alt	44449	55392	chr19_KI270914v1_alt:44449-55392	1	-	45269	55360	789624	8	680,53,104,51,294,285,36,72,	0,779,1293,5639,8278,9451,10636,10871,
#Deleted in new
chr19_KI270914v1_alt	44449	55392	chr19_KI270914v1_alt:44449-55392	1	-	44859	55360	789624	8	680,53,171,51,294,285,36,72,	0,779,1226,5639,8278,9451,10636,10871,
#Deleted in new
chr19_KI270914v1_alt	44454	55477	chr19_KI270914v1_alt:44454-55477	3	-	44859	55477	789624	8	675,54,104,51,294,285,36,157,	0,774,1288,5634,8273,9446,10631,10866,
#Deleted in new
chr19_KI270914v1_alt	44457	55372	chr19_KI270914v1_alt:44457-55372	1	-	44859	55360	789624	6	672,53,294,285,36,52,	0,771,8270,9443,10628,10863,
#Deleted in new
chr19_KI270914v1_alt	44457	55372	chr19_KI270914v1_alt:44457-55372	1	-	44859	55360	789624	7	672,53,51,294,285,36,52,	0,771,5631,8270,9443,10628,10863,
#Deleted in new
chr19_KI270914v1_alt	74678	89183	chr19_KI270914v1_alt:74678-89183	3	-	75187	89146	789624	8	686,53,102,51,294,300,36,71,	0,784,1299,5660,8863,10686,13434,14434,
#Deleted in new
chr19_KI270914v1_alt	91423	103976	chr19_KI270914v1_alt:91423-103976	7	-	91423	91423	16724991	8	382,53,105,51,294,299,36,34,	0,480,995,3636,6852,8669,11426,12519,
#Deleted in new
chr19_KI270914v1_alt	106156	120954	chr19_KI270914v1_alt:106156-120954	3	-	106607	120898	789624	9	493,53,105,51,294,300,282,36,90,	0,591,1106,5473,8669,10491,12226,13235,14708,
#Deleted in new
chr19_KI270914v1_alt	122888	132373	chr19_KI270914v1_alt:122888-132373	3	-	123301	132318	789624	8	683,53,105,51,294,285,36,89,	0,783,1298,4168,6391,7560,8607,9396,
#Deleted in new
chr19_KI270914v1_alt	134350	148898	chr19_KI270914v1_alt:134350-148898	3	-	134859	148861	0	8	686,53,102,51,294,300,36,71,	0,784,1299,5666,8989,10797,13533,14477,
#Deleted in new
chr19_KI270914v1_alt	150932	165052	chr19_KI270914v1_alt:150932-165052	3	-	151388	165042	0	8	498,53,105,51,294,300,36,44,	0,596,1111,5482,8700,10512,13248,14076,
#Deleted in new
chr19_KI270914v1_alt	167478	179121	chr19_KI270914v1_alt:167478-179121	3	-	167509	179071	789624	8	157,53,105,294,300,285,36,84,	0,255,770,6342,8218,9791,10846,11559,
#Deleted in new
chr19_KI270914v1_alt	190117	195655	chr19_KI270914v1_alt:190117-195655	7	-	190117	190117	16724991	7	358,51,303,297,310,285,523,	0,506,3044,3602,4108,4567,5015,
#Deleted in new
chr19_KI270914v1_alt	190338	194969	chr19_KI270914v1_alt:190338-194969	5	-	190338	190338	16724991	6	137,51,303,297,310,285,	0,285,2823,3381,3887,4346,
#Deleted in new
chr19_KI270914v1_alt	199335	199619	chr19_KI270914v1_alt:199335-199619	7	-	199335	199335	16724991	1	284,	0,
#Deleted in new
chr19_KI270914v1_alt	202665	202978	chr19_KI270914v1_alt:202665-202978	7	-	202665	202665	16724991	2	138,45,	0,268,
#Deleted in new
chr19_KI270915v1_alt	11	118	chr19_KI270915v1_alt:11-118	3	+	11	11	8553170	1	107,	0,
#Deleted in new
chr19_KI270915v1_alt	1841	18600	chr19_KI270915v1_alt:1841-18600	3	-	2325	18567	789624	8	694,53,105,294,300,285,36,67,	0,793,1306,11301,13174,14938,15965,16692,
#Deleted in new
chr19_KI270915v1_alt	1849	18586	chr19_KI270915v1_alt:1849-18586	1	-	2325	18567	789624	9	686,53,105,51,294,300,285,36,53,	0,785,1298,8076,11293,13166,14930,15957,16684,
#Deleted in new
chr19_KI270915v1_alt	20758	36388	chr19_KI270915v1_alt:20758-36388	3	-	21098	36299	0	8	382,53,105,51,294,300,36,123,	0,480,995,5365,8584,10430,13191,15507,
#Deleted in new
chr19_KI270915v1_alt	38285	52591	chr19_KI270915v1_alt:38285-52591	3	-	38788	52566	789624	9	680,53,105,51,294,300,285,36,59,	0,798,1313,5700,8920,10766,12179,13208,14247,
#Deleted in new
chr19_KI270915v1_alt	38286	52590	chr19_KI270915v1_alt:38286-52590	1	-	38788	52566	789624	8	679,53,105,294,300,285,36,58,	0,797,1312,8919,10765,12178,13207,14246,
#Deleted in new
chr19_KI270915v1_alt	54554	65471	chr19_KI270915v1_alt:54554-65471	3	-	54956	65459	789624	8	672,53,105,51,294,285,36,52,	0,771,1285,5632,8278,9445,10630,10865,
#Deleted in new
chr19_KI270915v1_alt	78780	82636	chr19_KI270915v1_alt:78780-82636	7	-	78780	78780	16724991	3	294,300,285,	0,1821,3571,
#Deleted in new
chr19_KI270915v1_alt	85080	99337	chr19_KI270915v1_alt:85080-99337	3	-	85285	99248	789624	8	382,53,102,51,294,300,36,123,	0,480,995,5356,8560,10386,13134,14134,
#Deleted in new
chr19_KI270915v1_alt	101727	114076	chr19_KI270915v1_alt:101727-114076	7	-	101727	101727	16724991	8	177,53,105,51,294,299,36,34,	0,275,790,3430,6646,8465,11222,12315,
#Deleted in new
chr19_KI270915v1_alt	116160	130546	chr19_KI270915v1_alt:116160-130546	3	-	116579	130527	0	8	572,53,105,51,294,300,36,53,	0,670,1185,5553,8843,10652,13389,14333,
#Deleted in new
chr19_KI270915v1_alt	132943	144591	chr19_KI270915v1_alt:132943-144591	3	-	132974	144541	789624	8	157,53,105,294,300,285,36,84,	0,255,770,6347,8223,9796,10851,11564,
#Deleted in new
chr19_KI270915v1_alt	155588	161126	chr19_KI270915v1_alt:155588-161126	7	-	155588	155588	16724991	7	358,51,303,297,310,285,523,	0,506,3044,3602,4108,4567,5015,
#Deleted in new
chr19_KI270915v1_alt	155809	160440	chr19_KI270915v1_alt:155809-160440	5	-	155809	155809	16724991	6	137,51,303,297,310,285,	0,285,2823,3381,3887,4346,
#Deleted in new
chr19_KI270915v1_alt	164806	165090	chr19_KI270915v1_alt:164806-165090	7	-	164806	164806	16724991	1	284,	0,
#Deleted in new
chr19_KI270915v1_alt	168136	168449	chr19_KI270915v1_alt:168136-168449	7	-	168136	168136	16724991	2	138,45,	0,268,
#Deleted in new
chr19_KI270916v1_alt	253	360	chr19_KI270916v1_alt:253-360	3	+	253	253	8553170	1	107,	0,
#Deleted in new
chr19_KI270916v1_alt	2083	18878	chr19_KI270916v1_alt:2083-18878	3	-	2567	18845	789624	8	694,53,105,294,300,285,36,67,	0,793,1306,11299,13172,14936,15963,16728,
#Deleted in new
chr19_KI270916v1_alt	2306	18878	chr19_KI270916v1_alt:2306-18878	1	-	2567	18845	789624	9	471,53,105,51,294,300,285,36,67,	0,570,1083,7861,11076,12949,14713,15740,16505,
#Deleted in new
chr19_KI270916v1_alt	21200	35215	chr19_KI270916v1_alt:21200-35215	3	-	21373	35202	789624	8	215,53,105,51,294,300,36,47,	0,313,828,5196,8401,10220,12968,13968,
#Deleted in new
chr19_KI270916v1_alt	37591	52028	chr19_KI270916v1_alt:37591-52028	3	-	37833	51992	789624	8	284,53,105,51,294,300,36,70,	0,382,897,5267,8471,10284,13027,14367,
#Deleted in new
chr19_KI270916v1_alt	53891	63388	chr19_KI270916v1_alt:53891-63388	3	-	54395	63388	789624	8	774,53,105,51,294,285,36,34,	0,874,1389,4256,6478,7647,8694,9463,
#Deleted in new
chr19_KI270916v1_alt	65475	80063	chr19_KI270916v1_alt:65475-80063	3	-	66040	80026	789624	10	573,51,2,106,51,294,300,285,36,71,	0,671,762,1184,5570,8791,10665,12453,13482,14517,
#Deleted in new
chr19_KI270916v1_alt	65578	80089	chr19_KI270916v1_alt:65578-80089	1	-	66154	80026	789624	9	470,51,106,51,294,300,285,36,97,	0,568,1081,5467,8688,10562,12350,13379,14414,
#Deleted in new
chr19_KI270916v1_alt	82010	93087	chr19_KI270916v1_alt:82010-93087	3	-	82416	92885	789624	7	676,53,51,294,285,36,242,	0,775,5637,8276,9449,10600,10835,
#Deleted in new
chr19_KI270916v1_alt	82014	92897	chr19_KI270916v1_alt:82014-92897	1	-	82416	92885	789624	8	672,53,105,51,294,285,36,52,	0,771,1285,5633,8272,9445,10596,10831,
#Deleted in new
chr19_KI270916v1_alt	98251	111674	chr19_KI270916v1_alt:98251-111674	7	-	98251	98251	16724991	6	344,294,300,285,36,35,	0,7966,9787,11537,12580,13388,
#Deleted in new
chr19_KI270916v1_alt	106217	111674	chr19_KI270916v1_alt:106217-111674	5	-	106217	106217	16724991	5	294,300,285,36,35,	0,1821,3571,4614,5422,
#Deleted in new
chr19_KI270916v1_alt	113931	128293	chr19_KI270916v1_alt:113931-128293	3	-	114214	128204	789624	8	460,53,102,51,294,300,36,123,	0,558,1073,5440,8751,10559,13295,14239,
#Deleted in new
chr19_KI270916v1_alt	130391	144417	chr19_KI270916v1_alt:130391-144417	3	-	130731	144386	0	8	382,53,105,51,294,300,36,65,	0,480,995,5366,8585,10397,13133,13961,
#Deleted in new
chr19_KI270916v1_alt	146388	158408	chr19_KI270916v1_alt:146388-158408	3	-	146828	158390	789624	8	566,53,105,294,300,285,36,52,	0,664,1179,6751,8627,10200,11255,11968,
#Deleted in new
chr19_KI270916v1_alt	169439	174977	chr19_KI270916v1_alt:169439-174977	7	-	169439	169439	16724991	7	358,51,303,297,310,285,523,	0,506,3044,3602,4108,4567,5015,
#Deleted in new
chr19_KI270916v1_alt	169660	174291	chr19_KI270916v1_alt:169660-174291	5	-	169660	169660	16724991	6	137,51,303,297,310,285,	0,285,2823,3381,3887,4346,
#Deleted in new
chr19_KI270916v1_alt	181987	184516	chr19_KI270916v1_alt:181987-184516	7	+	181987	181987	16724991	3	159,27,136,	0,279,2393,
#Deleted in new
chr19_KI270917v1_alt	3444	15460	chr19_KI270917v1_alt:3444-15460	3	+	3462	15020	789624	8	52,36,285,300,294,105,53,566,	0,729,1535,3093,4971,10732,11299,11450,
#Deleted in new
chr19_KI270917v1_alt	17436	31965	chr19_KI270917v1_alt:17436-31965	3	+	17467	31432	0	8	65,36,300,294,51,105,53,686,	0,973,3446,5261,8811,13125,13692,13843,
#Deleted in new
chr19_KI270917v1_alt	33935	46284	chr19_KI270917v1_alt:33935-46284	7	+	33935	33935	16724991	8	34,36,299,294,51,105,53,177,	0,1091,3585,5409,8868,11454,12021,12172,
#Deleted in new
chr19_KI270917v1_alt	48731	63047	chr19_KI270917v1_alt:48731-63047	3	+	48763	62725	789624	8	66,36,300,294,51,102,53,499,	0,1030,3514,5346,8792,13102,13666,13817,
#Deleted in new
chr19_KI270917v1_alt	48737	62786	chr19_KI270917v1_alt:48737-62786	1	+	48763	62725	789624	9	60,36,300,294,51,78,102,53,238,	0,1024,3508,5340,8786,10263,13096,13660,13811,
#Deleted in new
chr19_KI270917v1_alt	65374	77197	chr19_KI270917v1_alt:65374-77197	7	+	65374	65374	16724991	4	285,300,294,344,	0,1735,3562,11479,
#Deleted in new
chr19_KI270917v1_alt	65374	77197	chr19_KI270917v1_alt:65374-77197	5	+	65374	65374	16724991	4	285,300,294,344,	0,1735,3562,11479,
#Deleted in new
chr19_KI270917v1_alt	82348	93459	chr19_KI270917v1_alt:82348-93459	3	+	82550	93053	789624	8	242,36,285,294,51,105,53,676,	0,441,1377,2535,5424,9717,10283,10435,
#Deleted in new
chr19_KI270917v1_alt	82509	93459	chr19_KI270917v1_alt:82509-93459	1	+	82550	92643	789624	8	81,36,285,294,51,104,53,676,	0,280,1216,2374,5263,9556,10122,10274,
#Deleted in new
chr19_KI270917v1_alt	82538	93459	chr19_KI270917v1_alt:82538-93459	1	+	82550	93053	789624	6	52,36,285,294,53,676,	0,251,1187,2345,10093,10245,
#Deleted in new
chr19_KI270917v1_alt	82538	93459	chr19_KI270917v1_alt:82538-93459	1	+	82550	93053	789624	7	52,36,285,294,51,53,676,	0,251,1187,2345,5234,10093,10245,
#Deleted in new
chr19_KI270917v1_alt	82539	93064	chr19_KI270917v1_alt:82539-93064	1	+	82550	93053	789624	5	51,36,294,53,281,	0,250,2344,10092,10244,
#Deleted in new
chr19_KI270917v1_alt	95410	109511	chr19_KI270917v1_alt:95410-109511	1	+	95443	109221	789624	9	67,36,285,300,294,51,105,53,467,	0,1070,1850,3248,5100,8563,12896,13463,13634,
#Deleted in new
chr19_KI270917v1_alt	95419	109723	chr19_KI270917v1_alt:95419-109723	3	+	95443	109221	789624	8	58,36,285,300,294,105,53,679,	0,1061,1841,3239,5091,12887,13454,13625,
#Deleted in new
chr19_KI270917v1_alt	95432	109613	chr19_KI270917v1_alt:95432-109613	1	+	95443	109221	789624	8	45,36,300,294,51,105,53,569,	0,1048,3226,5078,8541,12874,13441,13612,
#Deleted in new
chr19_KI270917v1_alt	111621	127537	chr19_KI270917v1_alt:111621-127537	3	+	111710	126911	0	8	123,36,300,294,51,105,53,668,	0,2403,4900,6752,10214,14530,15097,15248,
#Deleted in new
chr19_KI270917v1_alt	129422	146154	chr19_KI270917v1_alt:129422-146154	3	+	129441	145678	789624	9	53,36,285,300,294,51,105,53,686,	0,744,1522,3271,5143,8603,15329,15894,16046,
#Deleted in new
chr19_KI270917v1_alt	129441	145907	chr19_KI270917v1_alt:129441-145907	1	+	129441	145678	789624	8	34,36,285,300,294,105,53,439,	0,725,1503,3252,5124,15310,15875,16027,
#Deleted in new
chr19_KI270917v1_alt	147885	147992	chr19_KI270917v1_alt:147885-147992	3	-	147885	147885	8553170	1	107,	0,
#Deleted in new
chr19_KI270917v1_alt	153194	168837	chr19_KI270917v1_alt:153194-168837	1	+	153236	168810	0	3	76,291,242,	0,10987,15401,
#Deleted in new
chr19_KI270917v1_alt	153226	168810	chr19_KI270917v1_alt:153226-168810	0	+	153226	153226	8553170	4	44,78,291,215,	0,6556,10955,15369,
#Deleted in new
chr19_KI270917v1_alt	153226	168014	chr19_KI270917v1_alt:153226-168014	1	+	153236	167312	0	4	44,36,291,1061,	0,1050,10955,13727,
#Deleted in new
chr19_KI270917v1_alt	153226	168014	chr19_KI270917v1_alt:153226-168014	0	+	153236	167312	0	4	44,291,636,92,	0,10955,13727,14696,
#Deleted in new
chr19_KI270917v1_alt	153226	169419	chr19_KI270917v1_alt:153226-169419	3	+	153236	168810	0	5	44,36,291,288,824,	0,1050,10955,13727,15369,
#Deleted in new
chr19_KI270917v1_alt	153231	168837	chr19_KI270917v1_alt:153231-168837	1	+	153236	168810	0	4	39,36,291,242,	0,1045,10950,15364,
#Deleted in new
chr19_KI270917v1_alt	153231	168837	chr19_KI270917v1_alt:153231-168837	1	+	153236	168810	0	5	39,36,291,222,242,	0,1045,10950,13722,15364,
#Deleted in new
chr19_KI270917v1_alt	153236	168810	chr19_KI270917v1_alt:153236-168810	1	+	153236	168686	0	4	34,291,214,215,	0,10945,13717,15359,
#Deleted in new
chr19_KI270917v1_alt	153236	168810	chr19_KI270917v1_alt:153236-168810	0	+	153236	153236	8553170	5	34,36,78,291,215,	0,1040,6546,10945,15359,
#Deleted in new
chr19_KI270917v1_alt	153236	168810	chr19_KI270917v1_alt:153236-168810	1	+	153236	168810	0	3	34,288,215,	0,13717,15359,
#Deleted in new
chr19_KI270917v1_alt	153236	168810	chr19_KI270917v1_alt:153236-168810	0	+	153236	153236	8553170	6	34,36,78,291,222,215,	0,1040,6546,10945,13717,15359,
#Deleted in new
chr19_KI270917v1_alt	153236	168810	chr19_KI270917v1_alt:153236-168810	1	+	153236	168810	0	4	34,291,288,215,	0,10945,13717,15359,
#Deleted in new
chr19_KI270917v1_alt	153236	168810	chr19_KI270917v1_alt:153236-168810	1	+	153236	168810	0	4	34,291,222,215,	0,10945,13717,15359,
#Deleted in new
chr19_KI270917v1_alt	185096	189012	chr19_KI270917v1_alt:185096-189012	3	+	185134	189012	789624	5	72,36,285,279,48,	0,149,373,3095,3868,
#Deleted in new
chr19_KI270917v1_alt	185102	189012	chr19_KI270917v1_alt:185102-189012	0	+	185134	189012	789624	4	66,285,279,48,	0,367,3089,3862,
#Deleted in new
chr19_KI270917v1_alt	185127	189012	chr19_KI270917v1_alt:185127-189012	0	+	185134	189012	789624	4	41,36,279,48,	0,118,3064,3837,
#Deleted in new
chr19_KI270918v1_alt	2216	2529	chr19_KI270918v1_alt:2216-2529	7	+	2216	2216	16724991	2	45,138,	0,175,
#Deleted in new
chr19_KI270918v1_alt	5575	5859	chr19_KI270918v1_alt:5575-5859	7	+	5575	5575	16724991	1	284,	0,
#Deleted in new
chr19_KI270918v1_alt	9539	15077	chr19_KI270918v1_alt:9539-15077	7	+	9539	9539	16724991	7	523,285,310,297,303,51,358,	0,686,1120,1639,2191,4981,5180,
#Deleted in new
chr19_KI270918v1_alt	10225	14856	chr19_KI270918v1_alt:10225-14856	5	+	10225	10225	16724991	6	285,310,297,303,51,137,	0,434,953,1505,4295,4494,
#Deleted in new
chr19_KI270918v1_alt	26076	37715	chr19_KI270918v1_alt:26076-37715	1	+	26126	37684	789624	8	84,36,285,300,294,105,53,157,	0,761,1567,3125,5003,10764,11331,11482,
#Deleted in new
chr19_KI270918v1_alt	26101	69086	chr19_KI270918v1_alt:26101-69086	3	+	26126	68982	789624	11	59,36,285,255,45,294,51,105,53,174,137,	0,736,1542,3100,34337,35908,39367,41953,42520,42671,42848,
#Deleted in new
chr19_KI270918v1_alt	40094	54629	chr19_KI270918v1_alt:40094-54629	3	+	40131	54096	0	8	71,36,300,294,51,105,53,686,	0,979,3452,5267,8817,13131,13698,13849,
#Deleted in new
chr19_KI270918v1_alt	56599	68949	chr19_KI270918v1_alt:56599-68949	7	+	56599	56599	16724991	8	34,36,299,294,51,105,53,177,	0,1091,3585,5410,8869,11455,12022,12173,
#Deleted in new
chr19_KI270918v1_alt	71388	85624	chr19_KI270918v1_alt:71388-85624	3	+	71428	85391	789624	8	74,36,300,294,51,102,53,410,	0,1038,3522,5354,8801,13111,13675,13826,
#Deleted in new
chr19_KI270918v1_alt	87897	91896	chr19_KI270918v1_alt:87897-91896	7	+	87897	87897	16724991	3	69,300,294,	0,1878,3705,
#Deleted in new
chr19_KI270918v1_alt	105164	116149	chr19_KI270918v1_alt:105164-116149	1	+	105205	115743	789624	8	81,36,285,294,51,105,53,676,	0,280,1250,2408,5297,9591,10157,10309,
#Deleted in new
chr19_KI270918v1_alt	105165	116148	chr19_KI270918v1_alt:105165-116148	1	+	105205	115743	789624	7	80,36,285,294,51,53,675,	0,279,1249,2407,5296,10156,10308,
#Deleted in new
chr19_KI270918v1_alt	105209	116025	chr19_KI270918v1_alt:105209-116025	3	+	105211	115743	789624	6	36,36,294,51,53,552,	0,235,2363,5252,10112,10264,
#Deleted in new
chr19_KI270918v1_alt	118119	122021	chr19_KI270918v1_alt:118119-122021	3	+	118133	122021	789624	4	48,36,285,302,	0,1047,1827,3600,
#Deleted in new
chr19_KI270919v1_alt	12	119	chr19_KI270919v1_alt:12-119	3	+	12	12	8553170	1	107,	0,
#Deleted in new
chr19_KI270919v1_alt	1842	18639	chr19_KI270919v1_alt:1842-18639	3	-	2326	18606	789624	8	694,53,105,294,300,285,36,67,	0,793,1306,11301,13174,14938,15965,16730,
#Deleted in new
chr19_KI270919v1_alt	1850	18636	chr19_KI270919v1_alt:1850-18636	1	-	2326	18606	789624	9	686,53,105,51,294,300,285,36,64,	0,785,1298,8077,11293,13166,14930,15957,16722,
#Deleted in new
chr19_KI270919v1_alt	20999	36313	chr19_KI270919v1_alt:20999-36313	7	-	20999	20999	16724991	8	177,53,105,51,272,300,36,34,	0,275,790,5160,8379,10203,12964,15280,
#Deleted in new
chr19_KI270919v1_alt	38340	52640	chr19_KI270919v1_alt:38340-52640	3	-	38802	52577	0	9	639,53,105,51,294,300,285,36,97,	0,757,1272,5659,8879,10725,12138,13168,14203,
#Deleted in new
chr19_KI270919v1_alt	54560	65453	chr19_KI270919v1_alt:54560-65453	1	-	55376	65426	789624	8	676,53,104,51,294,285,36,67,	0,775,1289,5634,8273,9440,10591,10826,
#Deleted in new
chr19_KI270919v1_alt	54561	65466	chr19_KI270919v1_alt:54561-65466	1	-	54966	65426	789624	7	675,53,51,294,285,36,80,	0,774,5633,8272,9439,10590,10825,
#Deleted in new
chr19_KI270919v1_alt	54561	65543	chr19_KI270919v1_alt:54561-65543	3	-	54966	65543	789624	8	675,54,104,51,294,285,36,157,	0,774,1288,5633,8272,9439,10590,10825,
#Deleted in new
chr19_KI270919v1_alt	54561	65466	chr19_KI270919v1_alt:54561-65466	1	-	54966	65420	789624	6	675,53,51,294,36,80,	0,774,5633,8272,10590,10825,
#Deleted in new
chr19_KI270919v1_alt	78759	82723	chr19_KI270919v1_alt:78759-82723	7	-	78759	78759	16724991	3	294,300,34,	0,1821,3930,
#Deleted in new
chr19_KI270919v1_alt	84942	99264	chr19_KI270919v1_alt:84942-99264	3	-	85264	99227	789624	8	499,53,102,51,294,300,36,71,	0,597,1112,5473,8677,10503,13251,14251,
#Deleted in new
chr19_KI270919v1_alt	101706	114055	chr19_KI270919v1_alt:101706-114055	7	-	101706	101706	16724991	8	177,53,105,51,294,299,36,34,	0,275,790,3430,6646,8465,11222,12315,
#Deleted in new
chr19_KI270919v1_alt	116313	130572	chr19_KI270919v1_alt:116313-130572	3	-	116558	130532	0	8	398,53,105,51,294,300,36,74,	0,496,1011,5379,8676,10485,13222,14185,
#Deleted in new
chr19_KI270919v1_alt	132541	144599	chr19_KI270919v1_alt:132541-144599	3	-	132981	144581	789624	8	566,53,105,294,300,285,36,52,	0,664,1179,6750,8626,10199,11254,12006,
#Deleted in new
chr19_KI270919v1_alt	155624	161162	chr19_KI270919v1_alt:155624-161162	7	-	155624	155624	16724991	7	358,51,303,297,310,285,523,	0,506,3044,3602,4108,4567,5015,
#Deleted in new
chr19_KI270919v1_alt	155845	160476	chr19_KI270919v1_alt:155845-160476	5	-	155845	155845	16724991	6	137,51,303,297,310,285,	0,285,2823,3381,3887,4346,
#Deleted in new
chr19_KI270919v1_alt	164842	165126	chr19_KI270919v1_alt:164842-165126	7	-	164842	164842	16724991	1	284,	0,
#Deleted in new
chr19_KI270919v1_alt	168172	168485	chr19_KI270919v1_alt:168172-168485	7	-	168172	168172	16724991	2	138,45,	0,268,
#Deleted in new
chr19_KI270920v1_alt	11326	23341	chr19_KI270920v1_alt:11326-23341	3	+	11344	22901	789624	8	52,36,285,300,294,105,53,566,	0,729,1535,3093,4971,10731,11298,11449,
#Deleted in new
chr19_KI270920v1_alt	25319	39891	chr19_KI270920v1_alt:25319-39891	3	+	25350	39358	0	8	65,36,300,294,51,105,53,686,	0,992,3465,5280,8854,13168,13735,13886,
#Deleted in new
chr19_KI270920v1_alt	41798	54665	chr19_KI270920v1_alt:41798-54665	7	+	41798	41798	16724991	9	97,36,282,299,294,51,105,53,634,	0,1154,1914,3648,5470,8929,11515,12082,12233,
#Deleted in new
chr19_KI270920v1_alt	56650	71164	chr19_KI270920v1_alt:56650-71164	3	+	56690	70651	789624	8	74,36,300,294,51,102,53,690,	0,1038,3522,5351,8799,13109,13673,13824,
#Deleted in new
chr19_KI270920v1_alt	56664	70712	chr19_KI270920v1_alt:56664-70712	1	+	56690	70651	789624	9	60,36,300,294,51,78,102,53,238,	0,1024,3508,5337,8785,10262,13095,13659,13810,
#Deleted in new
chr19_KI270920v1_alt	73300	85123	chr19_KI270920v1_alt:73300-85123	5	+	73300	73300	16724991	4	285,300,294,344,	0,1735,3562,11479,
#Deleted in new
chr19_KI270920v1_alt	73300	85123	chr19_KI270920v1_alt:73300-85123	7	+	73300	73300	16724991	4	285,300,294,344,	0,1735,3562,11479,
#Deleted in new
chr19_KI270920v1_alt	90467	101384	chr19_KI270920v1_alt:90467-101384	3	+	90479	100982	789624	7	52,36,285,294,105,53,672,	0,251,1187,2345,9527,10093,10245,
#Deleted in new
chr19_KI270920v1_alt	90468	100993	chr19_KI270920v1_alt:90468-100993	1	+	90479	100982	789624	5	51,36,294,53,281,	0,250,2344,10092,10244,
#Deleted in new
chr19_KI270920v1_alt	90479	101384	chr19_KI270920v1_alt:90479-101384	1	+	90479	100982	789624	8	40,36,285,294,51,105,53,672,	0,239,1175,2333,5222,9515,10081,10233,
#Deleted in new
chr19_KI270920v1_alt	90483	101264	chr19_KI270920v1_alt:90483-101264	0	+	90483	100982	789624	6	36,36,294,51,53,552,	0,235,2329,5218,10077,10229,
#Deleted in new
chr19_KI270920v1_alt	90485	101384	chr19_KI270920v1_alt:90485-101384	0	+	90485	100720	789624	8	34,36,285,294,51,172,53,672,	0,233,1169,2327,5216,9509,10075,10227,
#Deleted in new
chr19_KI270920v1_alt	103339	117440	chr19_KI270920v1_alt:103339-117440	1	+	103372	117150	789624	9	67,36,285,300,294,51,105,53,467,	0,1070,1850,3248,5100,8563,12896,13463,13634,
#Deleted in new
chr19_KI270920v1_alt	103348	117542	chr19_KI270920v1_alt:103348-117542	1	+	103372	117150	789624	8	58,36,300,294,51,105,53,569,	0,1061,3239,5091,8554,12887,13454,13625,
#Deleted in new
chr19_KI270920v1_alt	103348	117653	chr19_KI270920v1_alt:103348-117653	3	+	103372	117150	789624	8	58,36,285,300,294,105,53,680,	0,1061,1841,3239,5091,12887,13454,13625,
#Deleted in new
chr19_KI270920v1_alt	119550	134587	chr19_KI270920v1_alt:119550-134587	3	+	119639	133961	0	8	123,36,300,294,51,105,53,668,	0,1524,4021,5873,9335,13651,14218,14369,
#Deleted in new
chr19_KI270920v1_alt	136460	153231	chr19_KI270920v1_alt:136460-153231	3	+	136493	152755	789624	9	67,36,285,300,294,51,105,53,686,	0,777,1555,3304,5183,8643,15368,15933,16085,
#Deleted in new
chr19_KI270920v1_alt	136493	152984	chr19_KI270920v1_alt:136493-152984	1	+	136493	152755	789624	8	34,36,285,300,294,105,53,439,	0,744,1522,3271,5150,15335,15900,16052,
#Deleted in new
chr19_KI270920v1_alt	154962	155069	chr19_KI270920v1_alt:154962-155069	3	-	154962	154962	8553170	1	107,	0,
#Deleted in new
chr19_KI270920v1_alt	160267	175910	chr19_KI270920v1_alt:160267-175910	1	+	160309	175883	0	3	76,291,242,	0,10987,15401,
#Deleted in new
chr19_KI270920v1_alt	160299	175883	chr19_KI270920v1_alt:160299-175883	0	+	160299	160299	8553170	4	44,78,291,215,	0,6556,10955,15369,
#Deleted in new
chr19_KI270920v1_alt	160299	175087	chr19_KI270920v1_alt:160299-175087	1	+	160309	174385	0	4	44,36,291,1061,	0,1050,10955,13727,
#Deleted in new
chr19_KI270920v1_alt	160299	175087	chr19_KI270920v1_alt:160299-175087	0	+	160309	174385	0	4	44,291,636,92,	0,10955,13727,14696,
#Deleted in new
chr19_KI270920v1_alt	160299	176492	chr19_KI270920v1_alt:160299-176492	3	+	160309	175883	0	5	44,36,291,288,824,	0,1050,10955,13727,15369,
#Deleted in new
chr19_KI270920v1_alt	160304	175910	chr19_KI270920v1_alt:160304-175910	1	+	160309	175883	0	5	39,36,291,222,242,	0,1045,10950,13722,15364,
#Deleted in new
chr19_KI270920v1_alt	160304	175910	chr19_KI270920v1_alt:160304-175910	1	+	160309	175883	0	4	39,36,291,242,	0,1045,10950,15364,
#Deleted in new
chr19_KI270920v1_alt	160309	175883	chr19_KI270920v1_alt:160309-175883	1	+	160309	175883	0	4	34,291,222,215,	0,10945,13717,15359,
#Deleted in new
chr19_KI270920v1_alt	160309	175883	chr19_KI270920v1_alt:160309-175883	1	+	160309	175759	0	4	34,291,214,215,	0,10945,13717,15359,
#Deleted in new
chr19_KI270920v1_alt	160309	175883	chr19_KI270920v1_alt:160309-175883	0	+	160309	160309	8553170	5	34,36,78,291,215,	0,1040,6546,10945,15359,
#Deleted in new
chr19_KI270920v1_alt	160309	175883	chr19_KI270920v1_alt:160309-175883	0	+	160309	160309	8553170	6	34,36,78,291,222,215,	0,1040,6546,10945,13717,15359,
#Deleted in new
chr19_KI270920v1_alt	160309	175883	chr19_KI270920v1_alt:160309-175883	1	+	160309	175883	0	4	34,291,288,215,	0,10945,13717,15359,
#Deleted in new
chr19_KI270920v1_alt	160309	175883	chr19_KI270920v1_alt:160309-175883	1	+	160309	175883	0	3	34,288,215,	0,13717,15359,
#Deleted in new
chr19_KI270920v1_alt	192169	196085	chr19_KI270920v1_alt:192169-196085	3	+	192207	196085	789624	5	72,36,285,279,48,	0,149,373,3095,3868,
#Deleted in new
chr19_KI270921v1_alt	23041	35060	chr19_KI270921v1_alt:23041-35060	3	+	23059	34617	789624	8	52,36,285,300,294,105,53,569,	0,729,1535,3093,4971,10732,11299,11450,
#Deleted in new
chr19_KI270921v1_alt	37081	50989	chr19_KI270921v1_alt:37081-50989	3	+	37083	50737	0	8	36,36,300,294,51,105,53,294,	0,828,3300,5118,8579,12896,13463,13614,
#Deleted in new
chr19_KI270921v1_alt	53235	67566	chr19_KI270921v1_alt:53235-67566	3	+	53264	67271	0	8	63,36,300,294,51,102,53,472,	0,971,3443,5257,8828,13144,13708,13859,
#Deleted in new
chr19_KI270921v1_alt	69811	79091	chr19_KI270921v1_alt:69811-79091	3	+	69812	78825	8553170	8	35,36,285,294,51,105,53,536,	0,788,1586,2746,5211,8024,8591,8744,
#Deleted in new
chr19_KI270921v1_alt	81192	95628	chr19_KI270921v1_alt:81192-95628	3	+	81228	95386	789624	8	70,36,300,294,51,105,53,284,	0,1374,3853,5672,9119,13434,14001,14152,
#Deleted in new
chr19_KI270921v1_alt	98009	110367	chr19_KI270921v1_alt:98009-110367	7	+	98009	98009	16724991	8	41,36,299,294,51,105,53,177,	0,1098,3594,5416,8877,11463,12030,12181,
#Deleted in new
chr19_KI270921v1_alt	112809	127052	chr19_KI270921v1_alt:112809-127052	3	+	112849	126819	789624	8	74,36,300,294,51,102,53,410,	0,1038,3524,5353,8799,13118,13682,13833,
#Deleted in new
chr19_KI270921v1_alt	129468	133320	chr19_KI270921v1_alt:129468-133320	5	+	129468	129468	16724991	3	285,300,294,	0,1735,3558,
#Deleted in new
chr19_KI270921v1_alt	129468	141286	chr19_KI270921v1_alt:129468-141286	7	+	129468	129468	16724991	4	285,300,294,344,	0,1735,3558,11474,
#Deleted in new
chr19_KI270921v1_alt	146450	157527	chr19_KI270921v1_alt:146450-157527	3	+	146652	157121	789624	7	242,36,285,294,51,53,676,	0,441,1343,2507,5389,10249,10401,
#Deleted in new
chr19_KI270921v1_alt	146652	157523	chr19_KI270921v1_alt:146652-157523	1	+	146652	157121	789624	8	40,36,285,294,51,105,53,672,	0,239,1141,2305,5187,9481,10047,10199,
#Deleted in new
chr19_KI270921v1_alt	159474	173836	chr19_KI270921v1_alt:159474-173836	1	+	159511	173383	789624	9	71,36,285,300,294,51,106,51,347,	0,1070,1850,3623,5503,8967,13298,13866,14015,
#Deleted in new
chr19_KI270921v1_alt	159474	174062	chr19_KI270921v1_alt:159474-174062	3	+	159511	173497	789624	10	71,36,285,300,294,51,106,2,51,573,	0,1070,1850,3623,5503,8967,13298,13824,13866,14015,
#Deleted in new
chr19_KI270921v1_alt	176149	185646	chr19_KI270921v1_alt:176149-185646	3	+	176149	185142	789624	8	34,36,285,294,51,105,53,774,	0,767,1565,2725,5190,8003,8570,8723,
#Deleted in new
chr19_KI270921v1_alt	187509	201946	chr19_KI270921v1_alt:187509-201946	3	+	187545	201704	789624	8	70,36,300,294,51,105,53,284,	0,1374,3853,5672,9119,13435,14002,14153,
#Deleted in new
chr19_KI270921v1_alt	204316	218787	chr19_KI270921v1_alt:204316-218787	3	+	204335	218164	789624	8	53,36,300,294,51,105,53,665,	0,1017,3501,5326,8774,13088,13655,13806,
#Deleted in new
chr19_KI270921v1_alt	220659	237231	chr19_KI270921v1_alt:220659-237231	1	+	220692	236970	789624	9	67,36,285,300,294,51,105,53,471,	0,796,1574,3323,5202,8660,15384,15949,16101,
#Deleted in new
chr19_KI270921v1_alt	220659	237454	chr19_KI270921v1_alt:220659-237454	3	+	220692	236970	789624	8	67,36,285,300,294,105,53,694,	0,796,1574,3323,5202,15384,15949,16101,
#Deleted in new
chr19_KI270921v1_alt	239177	239284	chr19_KI270921v1_alt:239177-239284	3	-	239177	239177	8553170	1	107,	0,
#Deleted in new
chr19_KI270921v1_alt	244486	260129	chr19_KI270921v1_alt:244486-260129	1	+	244528	260102	0	3	76,291,242,	0,10987,15401,
#Deleted in new
chr19_KI270921v1_alt	244518	260102	chr19_KI270921v1_alt:244518-260102	0	+	244518	244518	8553170	4	44,78,291,215,	0,6556,10955,15369,
#Deleted in new
chr19_KI270921v1_alt	244518	260711	chr19_KI270921v1_alt:244518-260711	3	+	244528	260102	0	5	44,36,291,288,824,	0,1050,10955,13727,15369,
#Deleted in new
chr19_KI270921v1_alt	244518	259306	chr19_KI270921v1_alt:244518-259306	1	+	244528	258604	0	4	44,36,291,1061,	0,1050,10955,13727,
#Deleted in new
chr19_KI270921v1_alt	244518	259306	chr19_KI270921v1_alt:244518-259306	0	+	244528	258604	0	4	44,291,636,92,	0,10955,13727,14696,
#Deleted in new
chr19_KI270921v1_alt	244523	260129	chr19_KI270921v1_alt:244523-260129	1	+	244528	260102	0	5	39,36,291,222,242,	0,1045,10950,13722,15364,
#Deleted in new
chr19_KI270921v1_alt	244523	260129	chr19_KI270921v1_alt:244523-260129	1	+	244528	260102	0	4	39,36,291,242,	0,1045,10950,15364,
#Deleted in new
chr19_KI270921v1_alt	244528	260102	chr19_KI270921v1_alt:244528-260102	1	+	244528	259978	0	4	34,291,214,215,	0,10945,13717,15359,
#Deleted in new
chr19_KI270921v1_alt	244528	260102	chr19_KI270921v1_alt:244528-260102	0	+	244528	244528	8553170	6	34,36,78,291,222,215,	0,1040,6546,10945,13717,15359,
#Deleted in new
chr19_KI270921v1_alt	244528	260102	chr19_KI270921v1_alt:244528-260102	1	+	244528	260102	0	3	34,288,215,	0,13717,15359,
#Deleted in new
chr19_KI270921v1_alt	244528	260102	chr19_KI270921v1_alt:244528-260102	1	+	244528	260102	0	4	34,291,288,215,	0,10945,13717,15359,
#Deleted in new
chr19_KI270921v1_alt	244528	260102	chr19_KI270921v1_alt:244528-260102	1	+	244528	260102	0	4	34,291,222,215,	0,10945,13717,15359,
#Deleted in new
chr19_KI270921v1_alt	244528	260102	chr19_KI270921v1_alt:244528-260102	0	+	244528	244528	8553170	5	34,36,78,291,215,	0,1040,6546,10945,15359,
#Deleted in new
chr19_KI270921v1_alt	276388	280304	chr19_KI270921v1_alt:276388-280304	3	+	276426	280304	789624	5	72,36,285,279,48,	0,149,373,3095,3868,
#Deleted in new
chr19_KI270921v1_alt	276393	279586	chr19_KI270921v1_alt:276393-279586	0	+	276393	276393	8553170	3	180,285,103,	0,368,3090,
#Deleted in new
chr19_KI270921v1_alt	276393	277017	chr19_KI270921v1_alt:276393-277017	0	+	276393	276393	8553170	2	67,480,	0,144,
#Deleted in new
chr19_KI270921v1_alt	276394	280304	chr19_KI270921v1_alt:276394-280304	0	+	276426	280304	789624	4	66,285,279,48,	0,367,3089,3862,
#Deleted in new
chr19_KI270921v1_alt	276401	280304	chr19_KI270921v1_alt:276401-280304	0	+	276426	280304	789624	5	59,36,285,279,48,	0,136,360,3082,3855,
#Deleted in new
chr19_KI270921v1_alt	276419	280304	chr19_KI270921v1_alt:276419-280304	0	+	276426	280304	789624	4	41,36,279,48,	0,118,3064,3837,
#Deleted in new
chr19_KI270921v1_alt	276419	280304	chr19_KI270921v1_alt:276419-280304	0	+	276426	280304	789624	5	41,36,285,279,48,	0,118,342,3064,3837,
#Deleted in new
chr19_KI270921v1_alt	276426	280304	chr19_KI270921v1_alt:276426-280304	0	+	276426	280304	789624	3	34,279,48,	0,3057,3830,
#Deleted in new
chr19_KI270922v1_alt	457	12473	chr19_KI270922v1_alt:457-12473	3	+	475	12033	789624	8	52,36,285,300,294,105,53,566,	0,729,1535,3093,4971,10732,11299,11450,
#Deleted in new
chr19_KI270922v1_alt	14459	28965	chr19_KI270922v1_alt:14459-28965	3	+	14480	28433	0	8	55,36,300,294,51,105,53,685,	0,963,3436,5251,8789,13103,13670,13821,
#Deleted in new
chr19_KI270922v1_alt	30936	43285	chr19_KI270922v1_alt:30936-43285	7	+	30936	30936	16724991	8	34,36,282,299,294,105,53,177,	0,1091,1851,3585,5409,11454,12021,12172,
#Deleted in new
chr19_KI270922v1_alt	45724	59960	chr19_KI270922v1_alt:45724-59960	3	+	45764	59727	789624	8	74,36,300,294,51,102,53,410,	0,1038,3522,5354,8801,13111,13675,13826,
#Deleted in new
chr19_KI270922v1_alt	62376	66232	chr19_KI270922v1_alt:62376-66232	5	+	62376	62376	16724991	3	285,300,294,	0,1735,3562,
#Deleted in new
chr19_KI270922v1_alt	62376	74199	chr19_KI270922v1_alt:62376-74199	7	+	62376	62376	16724991	4	285,300,294,344,	0,1735,3562,11479,
#Deleted in new
chr19_KI270922v1_alt	79550	90455	chr19_KI270922v1_alt:79550-90455	3	+	79550	90053	789624	8	40,36,285,294,51,105,53,672,	0,239,1175,2333,5222,9515,10081,10233,
#Deleted in new
chr19_KI270922v1_alt	92410	106511	chr19_KI270922v1_alt:92410-106511	1	+	92443	106221	789624	9	67,36,285,300,294,51,105,53,467,	0,1070,1850,3248,5100,8563,12896,13463,13634,
#Deleted in new
chr19_KI270922v1_alt	92419	106723	chr19_KI270922v1_alt:92419-106723	3	+	92443	106221	789624	8	58,36,285,300,294,105,53,679,	0,1061,1841,3239,5091,12887,13454,13625,
#Deleted in new
chr19_KI270922v1_alt	108664	124242	chr19_KI270922v1_alt:108664-124242	3	+	108710	123885	789624	8	80,36,300,272,51,105,53,398,	0,2360,4857,6709,10148,14462,15029,15180,
#Deleted in new
chr19_KI270922v1_alt	126386	143165	chr19_KI270922v1_alt:126386-143165	3	+	126419	142681	789624	8	67,36,285,300,294,105,53,694,	0,777,1555,3304,5183,15368,15933,16085,
#Deleted in new
chr19_KI270922v1_alt	126389	143157	chr19_KI270922v1_alt:126389-143157	1	+	126419	142681	789624	9	64,36,285,300,294,51,105,53,686,	0,774,1552,3301,5180,8640,15365,15930,16082,
#Deleted in new
chr19_KI270922v1_alt	144888	144995	chr19_KI270922v1_alt:144888-144995	3	-	144888	144888	8553170	1	107,	0,
#Deleted in new
chr19_KI270922v1_alt	150197	165840	chr19_KI270922v1_alt:150197-165840	1	+	150239	165813	0	3	76,291,242,	0,10987,15401,
#Deleted in new
chr19_KI270922v1_alt	150229	165813	chr19_KI270922v1_alt:150229-165813	0	+	150229	150229	8553170	4	44,78,291,215,	0,6556,10955,15369,
#Deleted in new
chr19_KI270922v1_alt	150229	166422	chr19_KI270922v1_alt:150229-166422	1	+	150239	165813	0	5	44,36,291,288,824,	0,1050,10955,13727,15369,
#Deleted in new
chr19_KI270922v1_alt	150229	165017	chr19_KI270922v1_alt:150229-165017	0	+	150239	164315	0	4	44,291,636,92,	0,10955,13727,14696,
#Deleted in new
chr19_KI270922v1_alt	150229	165017	chr19_KI270922v1_alt:150229-165017	1	+	150239	164315	0	4	44,36,291,1061,	0,1050,10955,13727,
#Deleted in new
chr19_KI270922v1_alt	150234	165840	chr19_KI270922v1_alt:150234-165840	1	+	150239	165813	0	5	39,36,291,222,242,	0,1045,10950,13722,15364,
#Deleted in new
chr19_KI270922v1_alt	150234	165840	chr19_KI270922v1_alt:150234-165840	1	+	150239	165813	0	4	39,36,291,242,	0,1045,10950,15364,
#Deleted in new
chr19_KI270922v1_alt	150239	165813	chr19_KI270922v1_alt:150239-165813	1	+	150239	165689	0	4	34,291,214,215,	0,10945,13717,15359,
#Deleted in new
chr19_KI270922v1_alt	150239	165813	chr19_KI270922v1_alt:150239-165813	0	+	150239	150239	8553170	6	34,36,78,291,222,215,	0,1040,6546,10945,13717,15359,
#Deleted in new
chr19_KI270922v1_alt	150239	165813	chr19_KI270922v1_alt:150239-165813	1	+	150239	165813	0	4	34,291,288,215,	0,10945,13717,15359,
#Deleted in new
chr19_KI270922v1_alt	150239	165813	chr19_KI270922v1_alt:150239-165813	0	+	150239	150239	8553170	5	34,36,78,291,215,	0,1040,6546,10945,15359,
#Deleted in new
chr19_KI270922v1_alt	150239	165813	chr19_KI270922v1_alt:150239-165813	3	+	150239	165813	0	4	34,291,222,215,	0,10945,13717,15359,
#Deleted in new
chr19_KI270922v1_alt	150239	165813	chr19_KI270922v1_alt:150239-165813	1	+	150239	165813	0	3	34,288,215,	0,13717,15359,
#Deleted in new
chr19_KI270922v1_alt	182099	186015	chr19_KI270922v1_alt:182099-186015	3	+	182137	186015	789624	5	72,36,285,279,48,	0,149,373,3095,3868,
#Deleted in new
chr19_KI270922v1_alt	182104	185297	chr19_KI270922v1_alt:182104-185297	0	+	182104	182104	8553170	3	180,285,103,	0,368,3090,
#Deleted in new
chr19_KI270922v1_alt	182104	182728	chr19_KI270922v1_alt:182104-182728	0	+	182104	182104	8553170	2	67,480,	0,144,
#Deleted in new
chr19_KI270922v1_alt	182105	186015	chr19_KI270922v1_alt:182105-186015	0	+	182137	186015	789624	4	66,285,279,48,	0,367,3089,3862,
#Deleted in new
chr19_KI270922v1_alt	182130	186015	chr19_KI270922v1_alt:182130-186015	0	+	182137	186015	789624	4	41,36,279,48,	0,118,3064,3837,
#Deleted in new
chr19_KI270922v1_alt	182137	186015	chr19_KI270922v1_alt:182137-186015	0	+	182137	186015	789624	3	34,279,48,	0,3057,3830,
#Deleted in new
chr19_KI270923v1_alt	25	4330	chr19_KI270923v1_alt:25-4330	5	+	25	25	16724991	5	312,297,303,51,245,	0,521,1071,3861,4060,
#Deleted in new
chr19_KI270923v1_alt	25	4330	chr19_KI270923v1_alt:25-4330	7	+	25	25	16724991	5	312,297,303,51,245,	0,521,1071,3861,4060,
#Deleted in new
chr19_KI270923v1_alt	15474	27503	chr19_KI270923v1_alt:15474-27503	3	+	15492	27060	789624	8	52,36,285,300,294,105,53,569,	0,729,1535,3093,4975,10742,11309,11460,
#Deleted in new
chr19_KI270923v1_alt	29489	60215	chr19_KI270923v1_alt:29489-60215	3	+	29526	59682	789624	8	71,36,300,294,51,105,53,686,	0,863,3335,5153,8616,12933,13500,30040,
#Deleted in new
chr19_KI270923v1_alt	29495	43633	chr19_KI270923v1_alt:29495-43633	1	+	29526	43182	0	8	65,36,300,294,51,105,53,493,	0,857,3329,5147,8610,12927,13494,13645,
#Deleted in new
chr19_KI270923v1_alt	45620	59989	chr19_KI270923v1_alt:45620-59989	3	+	45709	59706	789624	8	123,36,300,294,51,102,53,460,	0,1031,3503,5317,8878,13194,13758,13909,
#Deleted in new
chr19_KI270923v1_alt	62246	75651	chr19_KI270923v1_alt:62246-75651	3	+	62247	75345	789624	6	35,36,285,300,294,344,	0,788,1582,3317,5144,13061,
#Deleted in new
chr19_KI270923v1_alt	80900	91882	chr19_KI270923v1_alt:80900-91882	3	+	80900	91477	789624	8	157,36,285,294,51,104,54,675,	0,356,1258,2416,5298,9590,10154,10307,
#Deleted in new
chr19_KI270923v1_alt	81017	91879	chr19_KI270923v1_alt:81017-91879	1	+	81017	91067	789624	8	40,36,285,294,51,104,53,672,	0,239,1141,2299,5181,9473,10038,10190,
#Deleted in new
chr19_KI270923v1_alt	93847	108144	chr19_KI270923v1_alt:93847-108144	3	+	93866	107641	0	9	53,36,285,300,294,51,105,53,680,	0,1052,1833,3231,5083,8546,12879,13446,13617,
#Deleted in new
chr19_KI270923v1_alt	110119	125517	chr19_KI270923v1_alt:110119-125517	3	+	110130	125309	789624	8	45,36,300,272,51,105,53,250,	0,2325,4822,6674,10114,14430,14997,15148,
#Deleted in new
chr19_KI270923v1_alt	127808	144581	chr19_KI270923v1_alt:127808-144581	3	+	127841	144097	789624	8	67,36,285,300,294,105,53,694,	0,777,1555,3304,5176,15362,15927,16079,
#Deleted in new
chr19_KI270923v1_alt	127808	144358	chr19_KI270923v1_alt:127808-144358	1	+	127841	144097	789624	9	67,36,285,300,294,51,105,53,471,	0,777,1555,3304,5176,8636,15362,15927,16079,
#Deleted in new
chr19_KI270923v1_alt	146304	146411	chr19_KI270923v1_alt:146304-146411	3	-	146304	146304	8553170	1	107,	0,
#Deleted in new
chr19_KI270923v1_alt	151614	167257	chr19_KI270923v1_alt:151614-167257	3	+	151656	167230	0	3	76,291,242,	0,10987,15401,
#Deleted in new
chr19_KI270923v1_alt	151646	166434	chr19_KI270923v1_alt:151646-166434	1	+	151656	165732	0	4	44,36,291,1061,	0,1050,10955,13727,
#Deleted in new
chr19_KI270923v1_alt	151646	166434	chr19_KI270923v1_alt:151646-166434	0	+	151656	165732	0	4	44,291,636,92,	0,10955,13727,14696,
#Deleted in new
chr19_KI270923v1_alt	151646	167839	chr19_KI270923v1_alt:151646-167839	1	+	151656	167230	0	5	44,36,291,288,824,	0,1050,10955,13727,15369,
#Deleted in new
chr19_KI270923v1_alt	151646	167230	chr19_KI270923v1_alt:151646-167230	0	+	151646	151646	8553170	4	44,78,291,215,	0,6556,10955,15369,
#Deleted in new
chr19_KI270923v1_alt	151651	167257	chr19_KI270923v1_alt:151651-167257	1	+	151656	167230	0	4	39,36,291,242,	0,1045,10950,15364,
#Deleted in new
chr19_KI270923v1_alt	151651	167257	chr19_KI270923v1_alt:151651-167257	1	+	151656	167230	0	5	39,36,291,222,242,	0,1045,10950,13722,15364,
#Deleted in new
chr19_KI270923v1_alt	151656	167230	chr19_KI270923v1_alt:151656-167230	1	+	151656	167106	0	4	34,291,214,215,	0,10945,13717,15359,
#Deleted in new
chr19_KI270923v1_alt	151656	167230	chr19_KI270923v1_alt:151656-167230	1	+	151656	167230	0	4	34,291,288,215,	0,10945,13717,15359,
#Deleted in new
chr19_KI270923v1_alt	151656	167230	chr19_KI270923v1_alt:151656-167230	0	+	151656	151656	8553170	6	34,36,78,291,222,215,	0,1040,6546,10945,13717,15359,
#Deleted in new
chr19_KI270923v1_alt	151656	167230	chr19_KI270923v1_alt:151656-167230	0	+	151656	151656	8553170	5	34,36,78,291,215,	0,1040,6546,10945,15359,
#Deleted in new
chr19_KI270923v1_alt	151656	167230	chr19_KI270923v1_alt:151656-167230	1	+	151656	167230	0	3	34,288,215,	0,13717,15359,
#Deleted in new
chr19_KI270923v1_alt	151656	167230	chr19_KI270923v1_alt:151656-167230	1	+	151656	167230	0	4	34,291,222,215,	0,10945,13717,15359,
#Deleted in new
chr19_KI270923v1_alt	183516	187432	chr19_KI270923v1_alt:183516-187432	3	+	183554	187432	789624	5	72,36,285,279,48,	0,149,373,3095,3868,
#Deleted in new
chr19_KI270923v1_alt	183521	186714	chr19_KI270923v1_alt:183521-186714	0	+	183521	183521	8553170	3	180,285,103,	0,368,3090,
#Deleted in new
chr19_KI270923v1_alt	183521	184145	chr19_KI270923v1_alt:183521-184145	0	+	183521	183521	8553170	2	67,480,	0,144,
#Deleted in new
chr19_KI270923v1_alt	183522	187432	chr19_KI270923v1_alt:183522-187432	0	+	183554	187432	789624	4	66,285,279,48,	0,367,3089,3862,
#Deleted in new
chr19_KI270923v1_alt	183547	187432	chr19_KI270923v1_alt:183547-187432	0	+	183554	187432	789624	4	41,36,279,48,	0,118,3064,3837,
#Deleted in new
chr19_KI270923v1_alt	183554	187432	chr19_KI270923v1_alt:183554-187432	0	+	183554	187432	789624	3	34,279,48,	0,3057,3830,
#Deleted in new
chr19_KI270929v1_alt	229	10713	chr19_KI270929v1_alt:229-10713	3	+	229	10273	789624	6	286,300,294,105,53,566,	0,1559,3441,9200,9767,9918,
#Deleted in new
chr19_KI270929v1_alt	12713	27229	chr19_KI270929v1_alt:12713-27229	3	+	12720	26696	789624	8	41,36,300,294,51,105,53,686,	0,968,3441,5253,8798,13112,13679,13830,
#Deleted in new
chr19_KI270929v1_alt	29199	41545	chr19_KI270929v1_alt:29199-41545	7	+	29199	29199	16724991	8	34,36,299,294,51,105,53,177,	0,1091,3585,5407,8865,11451,12018,12169,
#Deleted in new
chr19_KI270929v1_alt	44013	58500	chr19_KI270929v1_alt:44013-58500	3	+	44027	57989	789624	8	48,36,300,294,51,102,53,688,	0,1012,3496,5327,8774,13084,13648,13799,
#Deleted in new
chr19_KI270929v1_alt	60638	64494	chr19_KI270929v1_alt:60638-64494	7	+	60638	60638	16724991	3	285,300,294,	0,1735,3562,
#Deleted in new
chr19_KI270929v1_alt	77774	88724	chr19_KI270929v1_alt:77774-88724	3	+	77815	88318	789624	8	81,36,285,294,51,105,53,676,	0,280,1216,2374,5263,9556,10122,10274,
#Deleted in new
chr19_KI270929v1_alt	90645	104949	chr19_KI270929v1_alt:90645-104949	1	+	90708	104487	789624	9	97,36,285,300,294,51,105,53,639,	0,1100,1880,3278,5130,8594,12927,13494,13665,
#Deleted in new
chr19_KI270929v1_alt	90684	104989	chr19_KI270929v1_alt:90684-104989	3	+	90708	104487	789624	8	58,36,285,300,294,105,53,679,	0,1061,1841,3239,5091,12888,13455,13626,
#Deleted in new
chr19_KI270929v1_alt	106946	122800	chr19_KI270929v1_alt:106946-122800	3	+	106976	122177	789624	9	64,36,282,300,294,51,105,53,665,	0,2344,3107,4841,6693,10155,14471,15038,15189,
#Deleted in new
chr19_KI270929v1_alt	124675	141434	chr19_KI270929v1_alt:124675-141434	3	+	124708	140950	789624	8	67,36,285,300,294,105,53,694,	0,758,1536,3285,5164,15348,15913,16065,
#Deleted in new
chr19_KI270929v1_alt	124689	141426	chr19_KI270929v1_alt:124689-141426	1	+	124708	140950	789624	9	53,36,285,300,294,51,105,53,686,	0,744,1522,3271,5150,8610,15334,15899,16051,
#Deleted in new
chr19_KI270929v1_alt	143157	143264	chr19_KI270929v1_alt:143157-143264	3	-	143157	143157	8553170	1	107,	0,
#Deleted in new
chr19_KI270929v1_alt	148465	164108	chr19_KI270929v1_alt:148465-164108	1	+	148507	164081	0	3	76,291,242,	0,10987,15401,
#Deleted in new
chr19_KI270929v1_alt	148497	163285	chr19_KI270929v1_alt:148497-163285	1	+	148507	162583	0	4	44,36,291,1061,	0,1050,10955,13727,
#Deleted in new
chr19_KI270929v1_alt	148497	163285	chr19_KI270929v1_alt:148497-163285	0	+	148507	162583	0	4	44,291,636,92,	0,10955,13727,14696,
#Deleted in new
chr19_KI270929v1_alt	148497	164081	chr19_KI270929v1_alt:148497-164081	0	+	148497	148497	8553170	4	44,78,291,215,	0,6556,10955,15369,
#Deleted in new
chr19_KI270929v1_alt	148497	165638	chr19_KI270929v1_alt:148497-165638	1	+	148507	164081	0	5	44,36,291,288,1772,	0,1050,10955,13727,15369,
#Deleted in new
chr19_KI270929v1_alt	148502	164108	chr19_KI270929v1_alt:148502-164108	1	+	148507	164081	0	5	39,36,291,222,242,	0,1045,10950,13722,15364,
#Deleted in new
chr19_KI270929v1_alt	148502	164108	chr19_KI270929v1_alt:148502-164108	1	+	148507	164081	0	4	39,36,291,242,	0,1045,10950,15364,
#Deleted in new
chr19_KI270929v1_alt	148507	164081	chr19_KI270929v1_alt:148507-164081	0	+	148507	148507	8553170	6	34,36,78,291,222,215,	0,1040,6546,10945,13717,15359,
#Deleted in new
chr19_KI270929v1_alt	148507	164081	chr19_KI270929v1_alt:148507-164081	1	+	148507	164081	0	4	34,291,222,215,	0,10945,13717,15359,
#Deleted in new
chr19_KI270929v1_alt	148507	164081	chr19_KI270929v1_alt:148507-164081	3	+	148507	164081	0	4	34,291,288,215,	0,10945,13717,15359,
#Deleted in new
chr19_KI270929v1_alt	148507	164081	chr19_KI270929v1_alt:148507-164081	0	+	148507	148507	8553170	5	34,36,78,291,215,	0,1040,6546,10945,15359,
#Deleted in new
chr19_KI270929v1_alt	148507	164081	chr19_KI270929v1_alt:148507-164081	1	+	148507	163957	0	4	34,291,214,215,	0,10945,13717,15359,
#Deleted in new
chr19_KI270929v1_alt	148507	164081	chr19_KI270929v1_alt:148507-164081	1	+	148507	164081	0	3	34,288,215,	0,13717,15359,
#Deleted in new
chr19_KI270929v1_alt	180367	184283	chr19_KI270929v1_alt:180367-184283	1	+	180405	184283	789624	5	72,36,285,279,48,	0,149,373,3095,3868,
#Deleted in new
chr19_KI270929v1_alt	180372	180996	chr19_KI270929v1_alt:180372-180996	0	+	180372	180372	8553170	2	67,480,	0,144,
#Deleted in new
chr19_KI270929v1_alt	180372	183565	chr19_KI270929v1_alt:180372-183565	0	+	180372	180372	8553170	3	180,285,103,	0,368,3090,
#Deleted in new
chr19_KI270929v1_alt	180373	184283	chr19_KI270929v1_alt:180373-184283	2	+	180405	184283	789624	4	66,285,279,48,	0,367,3089,3862,
#Deleted in new
chr19_KI270929v1_alt	180380	184283	chr19_KI270929v1_alt:180380-184283	0	+	180405	184283	789624	5	59,36,285,279,48,	0,136,360,3082,3855,
#Deleted in new
chr19_KI270929v1_alt	180398	184283	chr19_KI270929v1_alt:180398-184283	0	+	180405	184283	789624	5	41,36,285,279,48,	0,118,342,3064,3837,
#Deleted in new
chr19_KI270929v1_alt	180398	184283	chr19_KI270929v1_alt:180398-184283	0	+	180405	184283	789624	4	41,36,279,48,	0,118,3064,3837,
#Deleted in new
chr19_KI270929v1_alt	180405	184283	chr19_KI270929v1_alt:180405-184283	0	+	180405	184283	789624	3	34,279,48,	0,3057,3830,
#Deleted in new
chr19_KI270930v1_alt	11	118	chr19_KI270930v1_alt:11-118	3	+	11	11	8553170	1	107,	0,
#Deleted in new
chr19_KI270930v1_alt	1841	18618	chr19_KI270930v1_alt:1841-18618	3	-	2325	18585	789624	8	694,53,105,294,300,285,36,67,	0,793,1306,11300,13173,14937,15964,16710,
#Deleted in new
chr19_KI270930v1_alt	1849	18615	chr19_KI270930v1_alt:1849-18615	1	-	2325	18585	789624	9	686,53,105,51,294,300,285,36,64,	0,785,1298,8075,11292,13165,14929,15956,16702,
#Deleted in new
chr19_KI270930v1_alt	20492	36147	chr19_KI270930v1_alt:20492-36147	3	-	20884	36101	789624	8	666,53,105,51,272,300,36,80,	0,764,1279,5648,8866,10690,13451,15575,
#Deleted in new
chr19_KI270930v1_alt	20589	84249	chr19_KI270930v1_alt:20589-84249	3	-	21032	84231	789624	10	477,92,53,105,294,181,119,285,36,52,	0,18084,18294,18809,26417,28263,59978,61547,62590,63608,
#Deleted in new
chr19_KI270930v1_alt	38128	52446	chr19_KI270930v1_alt:38128-52446	1	-	38588	52383	789624	9	637,53,105,51,294,300,285,36,97,	0,755,1270,5657,8878,10724,12137,13167,14221,
#Deleted in new
chr19_KI270930v1_alt	54367	65274	chr19_KI270930v1_alt:54367-65274	1	-	54772	65228	789624	6	675,53,51,294,36,80,	0,774,5635,8274,10592,10827,
#Deleted in new
chr19_KI270930v1_alt	54367	65274	chr19_KI270930v1_alt:54367-65274	3	-	54772	65234	789624	7	675,53,51,294,285,36,80,	0,774,5635,8274,9441,10592,10827,
#Deleted in new
chr19_KI270930v1_alt	54367	65351	chr19_KI270930v1_alt:54367-65351	1	-	54772	65351	789624	8	675,54,104,51,294,285,36,157,	0,774,1288,5635,8274,9441,10592,10827,
#Deleted in new
chr19_KI270930v1_alt	54370	65246	chr19_KI270930v1_alt:54370-65246	1	-	55182	65234	789624	8	672,53,104,51,294,285,36,52,	0,771,1285,5632,8271,9438,10589,10824,
#Deleted in new
chr19_KI270930v1_alt	78565	84231	chr19_KI270930v1_alt:78565-84231	7	-	78565	78565	16724991	5	294,300,285,36,34,	0,1821,3571,4614,5632,
#Deleted in new
chr19_KI270930v1_alt	86263	100769	chr19_KI270930v1_alt:86263-100769	3	-	86772	100740	789624	8	686,53,102,51,294,300,36,63,	0,784,1299,5667,8872,10695,13443,14443,
#Deleted in new
chr19_KI270930v1_alt	103223	115572	chr19_KI270930v1_alt:103223-115572	7	-	103223	103223	16724991	8	176,53,105,51,294,299,36,34,	0,274,789,3429,6646,8463,11222,12315,
#Deleted in new
chr19_KI270930v1_alt	117752	132611	chr19_KI270930v1_alt:117752-132611	3	-	118203	132555	789624	8	493,53,105,51,294,300,36,90,	0,591,1106,5476,8672,10494,13238,14769,
#Deleted in new
chr19_KI270930v1_alt	134454	144052	chr19_KI270930v1_alt:134454-144052	3	-	134958	144052	789624	8	774,53,105,51,294,285,36,34,	0,874,1389,4259,6482,7651,8698,9564,
#Deleted in new
chr19_KI270930v1_alt	146079	160620	chr19_KI270930v1_alt:146079-160620	3	-	146588	160589	789624	8	686,53,105,51,294,300,36,65,	0,784,1299,5668,8973,10777,13513,14476,
#Deleted in new
chr19_KI270930v1_alt	162687	171541	chr19_KI270930v1_alt:162687-171541	3	-	163051	171541	789624	5	490,53,105,294,302,	0,588,1103,6680,8552,
#Deleted in new
chr19_KI270930v1_alt	185696	191234	chr19_KI270930v1_alt:185696-191234	7	-	185696	185696	16724991	7	358,51,303,297,310,285,523,	0,506,3044,3602,4108,4567,5015,
#Deleted in new
chr19_KI270930v1_alt	185917	190548	chr19_KI270930v1_alt:185917-190548	5	-	185917	185917	16724991	6	137,51,303,297,310,285,	0,285,2823,3381,3887,4346,
#Deleted in new
chr19_KI270930v1_alt	194914	195198	chr19_KI270930v1_alt:194914-195198	7	-	194914	194914	16724991	1	284,	0,
#Deleted in new
chr19_KI270930v1_alt	198244	198557	chr19_KI270930v1_alt:198244-198557	7	-	198244	198244	16724991	2	138,45,	0,268,
#Deleted in new
chr19_KI270931v1_alt	368	475	chr19_KI270931v1_alt:368-475	3	+	368	368	8553170	1	107,	0,
#Deleted in new
chr19_KI270931v1_alt	2198	18974	chr19_KI270931v1_alt:2198-18974	3	-	2682	18941	789624	8	694,53,105,294,300,285,36,67,	0,793,1306,11303,13172,14936,15963,16709,
#Deleted in new
chr19_KI270931v1_alt	2206	18960	chr19_KI270931v1_alt:2206-18960	1	-	2682	18941	789624	9	686,53,105,51,294,300,285,36,53,	0,785,1298,8079,11295,13164,14928,15955,16701,
#Deleted in new
chr19_KI270931v1_alt	21014	35831	chr19_KI270931v1_alt:21014-35831	3	-	21471	35793	0	8	499,53,105,51,294,300,36,72,	0,597,1112,5482,8701,10547,13308,14745,
#Deleted in new
chr19_KI270931v1_alt	37779	52083	chr19_KI270931v1_alt:37779-52083	3	-	38282	52058	789624	9	680,53,105,51,294,300,285,36,59,	0,798,1311,5698,8918,10764,12177,13206,14245,
#Deleted in new
chr19_KI270931v1_alt	37780	52082	chr19_KI270931v1_alt:37780-52082	1	-	38282	52058	789624	8	679,53,105,294,300,285,36,58,	0,797,1310,8917,10763,12176,13205,14244,
#Deleted in new
chr19_KI270931v1_alt	54042	64992	chr19_KI270931v1_alt:54042-64992	3	-	54448	64951	789624	8	676,53,105,51,294,285,36,81,	0,775,1289,5636,8282,9449,10634,10869,
#Deleted in new
chr19_KI270931v1_alt	78272	82128	chr19_KI270931v1_alt:78272-82128	7	-	78272	78272	16724991	3	294,300,285,	0,1821,3571,
#Deleted in new
chr19_KI270931v1_alt	84455	98777	chr19_KI270931v1_alt:84455-98777	3	-	84777	98740	789624	8	499,53,102,51,294,300,36,71,	0,597,1112,5473,8677,10503,13251,14251,
#Deleted in new
chr19_KI270931v1_alt	101219	113601	chr19_KI270931v1_alt:101219-113601	7	-	101219	101219	16724991	8	177,53,105,51,294,299,36,67,	0,275,790,3430,6646,8465,11222,12315,
#Deleted in new
chr19_KI270931v1_alt	115534	130041	chr19_KI270931v1_alt:115534-130041	3	-	116071	130019	0	8	690,53,105,51,294,300,36,56,	0,788,1303,5671,8961,10770,13507,14451,
#Deleted in new
chr19_KI270931v1_alt	131930	144047	chr19_KI270931v1_alt:131930-144047	3	-	132466	144028	789624	8	662,53,150,294,300,285,36,53,	0,760,1275,6847,8723,10296,11351,12064,
#Deleted in new
chr19_KI270931v1_alt	132026	144046	chr19_KI270931v1_alt:132026-144046	1	-	132466	144028	789624	8	566,53,105,294,300,285,36,52,	0,664,1179,6751,8627,10200,11255,11968,
#Deleted in new
chr19_KI270931v1_alt	155071	160609	chr19_KI270931v1_alt:155071-160609	7	-	155071	155071	16724991	7	358,51,303,297,310,285,523,	0,506,3044,3602,4108,4567,5015,
#Deleted in new
chr19_KI270931v1_alt	155292	159923	chr19_KI270931v1_alt:155292-159923	5	-	155292	155292	16724991	6	137,51,303,297,310,285,	0,285,2823,3381,3887,4346,
#Deleted in new
chr19_KI270931v1_alt	164289	164573	chr19_KI270931v1_alt:164289-164573	7	-	164289	164289	16724991	1	284,	0,
#Deleted in new
chr19_KI270931v1_alt	167619	167932	chr19_KI270931v1_alt:167619-167932	7	-	167619	167619	16724991	2	138,45,	0,268,
#Deleted in new
chr19_KI270932v1_alt	346	453	chr19_KI270932v1_alt:346-453	3	+	346	346	8553170	1	107,	0,
#Deleted in new
chr19_KI270932v1_alt	2176	18971	chr19_KI270932v1_alt:2176-18971	3	-	2660	18938	789624	8	694,53,105,294,300,285,36,67,	0,793,1306,11299,13172,14936,15963,16728,
#Deleted in new
chr19_KI270932v1_alt	2184	18957	chr19_KI270932v1_alt:2184-18957	1	-	2660	18938	789624	9	686,53,105,51,294,300,285,36,53,	0,785,1298,8076,11291,13164,14928,15955,16720,
#Deleted in new
chr19_KI270932v1_alt	21126	36733	chr19_KI270932v1_alt:21126-36733	3	-	21234	36644	789624	8	382,53,105,51,272,300,36,123,	0,480,995,5365,8583,10407,13168,15484,
#Deleted in new
chr19_KI270932v1_alt	38630	52936	chr19_KI270932v1_alt:38630-52936	3	-	39133	52909	789624	9	680,53,105,51,294,300,285,36,61,	0,798,1313,5701,8921,10767,12180,13210,14245,
#Deleted in new
chr19_KI270932v1_alt	54892	65840	chr19_KI270932v1_alt:54892-65840	1	-	55708	65799	789624	8	676,53,104,51,294,285,36,81,	0,775,1289,5635,8274,9447,10632,10867,
#Deleted in new
chr19_KI270932v1_alt	54893	65916	chr19_KI270932v1_alt:54893-65916	3	-	55298	65916	789624	8	675,54,104,51,294,285,36,157,	0,774,1288,5634,8273,9446,10631,10866,
#Deleted in new
chr19_KI270932v1_alt	71154	83086	chr19_KI270932v1_alt:71154-83086	7	-	71154	71154	16724991	4	344,294,300,394,	0,7967,9788,11538,
#Deleted in new
chr19_KI270932v1_alt	79121	83086	chr19_KI270932v1_alt:79121-83086	5	-	79121	79121	16724991	3	294,300,394,	0,1821,3571,
#Deleted in new
chr19_KI270932v1_alt	85339	99634	chr19_KI270932v1_alt:85339-99634	3	-	85626	99596	789624	8	464,53,102,51,294,300,36,72,	0,562,1077,5447,8650,10475,13223,14223,
#Deleted in new
chr19_KI270932v1_alt	102078	114429	chr19_KI270932v1_alt:102078-114429	7	-	102078	102078	16724991	8	177,53,105,51,294,299,36,34,	0,275,790,3430,6648,8465,11224,12317,
#Deleted in new
chr19_KI270932v1_alt	116913	131451	chr19_KI270932v1_alt:116913-131451	3	-	117060	131393	789624	8	189,53,105,51,294,300,36,92,	0,287,802,5172,8368,10190,12934,14446,
#Deleted in new
chr19_KI270932v1_alt	133383	142868	chr19_KI270932v1_alt:133383-142868	3	-	133796	142813	789624	8	683,53,105,51,294,285,36,89,	0,783,1298,4168,6391,7560,8607,9396,
#Deleted in new
chr19_KI270932v1_alt	145059	159387	chr19_KI270932v1_alt:145059-159387	3	-	145354	159358	0	8	472,53,102,51,294,300,36,63,	0,570,1085,5452,8777,10585,13321,14265,
#Deleted in new
chr19_KI270932v1_alt	161633	175541	chr19_KI270932v1_alt:161633-175541	3	-	161885	175539	0	8	294,53,105,51,294,300,36,36,	0,392,907,5278,8496,10308,13044,13872,
#Deleted in new
chr19_KI270932v1_alt	177974	189661	chr19_KI270932v1_alt:177974-189661	3	-	178005	189611	789624	8	157,53,105,294,300,285,36,84,	0,255,770,6347,8223,9796,10851,11603,
#Deleted in new
chr19_KI270932v1_alt	200767	206193	chr19_KI270932v1_alt:200767-206193	5	-	200767	200767	16724991	7	245,51,303,297,310,285,523,	0,394,2932,3490,3996,4455,4903,
#Deleted in new
chr19_KI270932v1_alt	200767	206193	chr19_KI270932v1_alt:200767-206193	7	-	200767	200767	16724991	7	245,51,303,297,310,285,523,	0,394,2932,3490,3996,4455,4903,
#Deleted in new
chr19_KI270932v1_alt	213002	215732	chr19_KI270932v1_alt:213002-215732	7	-	213002	213002	16724991	2	360,108,	0,2622,
#Deleted in new
chr19_KI270933v1_alt	11	118	chr19_KI270933v1_alt:11-118	3	+	11	11	8553170	1	107,	0,
#Deleted in new
chr19_KI270933v1_alt	1849	18614	chr19_KI270933v1_alt:1849-18614	3	-	2325	18581	789624	9	686,53,105,51,294,300,285,36,67,	0,785,1298,8077,11292,13161,14925,15952,16698,
#Deleted in new
chr19_KI270933v1_alt	2096	18581	chr19_KI270933v1_alt:2096-18581	1	-	2325	18581	789624	8	439,53,105,294,300,285,36,34,	0,538,1051,11045,12914,14678,15705,16451,
#Deleted in new
chr19_KI270933v1_alt	20757	36126	chr19_KI270933v1_alt:20757-36126	3	-	21113	36119	8553170	8	398,53,105,51,272,300,36,41,	0,496,1011,5382,8600,10424,13185,15328,
#Deleted in new
chr19_KI270933v1_alt	21838	36119	chr19_KI270933v1_alt:21838-36119	0	-	21838	36119	789624	5	35,272,300,36,34,	0,7519,9343,12104,14247,
#Deleted in new
chr19_KI270933v1_alt	38146	52466	chr19_KI270933v1_alt:38146-52466	3	-	38608	52403	789624	9	639,53,105,51,294,300,285,36,97,	0,757,1272,5659,8880,10726,12139,13169,14223,
#Deleted in new
chr19_KI270933v1_alt	54386	65280	chr19_KI270933v1_alt:54386-65280	1	-	55202	65253	789624	8	676,53,104,51,294,285,36,67,	0,775,1289,5635,8274,9441,10592,10827,
#Deleted in new
chr19_KI270933v1_alt	54387	65370	chr19_KI270933v1_alt:54387-65370	1	-	54792	65370	789624	8	675,54,104,51,294,285,36,157,	0,774,1288,5634,8273,9440,10591,10826,
#Deleted in new
chr19_KI270933v1_alt	54390	65265	chr19_KI270933v1_alt:54390-65265	1	-	55202	65253	789624	7	672,53,104,294,285,36,52,	0,771,1285,8270,9437,10588,10823,
#Deleted in new
chr19_KI270933v1_alt	54390	65265	chr19_KI270933v1_alt:54390-65265	1	-	54792	65253	789624	7	672,53,51,294,285,36,52,	0,771,5631,8270,9437,10588,10823,
#Deleted in new
chr19_KI270933v1_alt	54390	65443	chr19_KI270933v1_alt:54390-65443	3	-	54792	65253	789624	8	672,53,171,51,294,285,36,230,	0,771,1218,5631,8270,9437,10588,10823,
#Deleted in new
chr19_KI270933v1_alt	63547	65535	chr19_KI270933v1_alt:63547-65535	0	-	63547	63547	8553170	3	565,36,322,	0,1431,1666,
#Deleted in new
chr19_KI270933v1_alt	70618	82440	chr19_KI270933v1_alt:70618-82440	7	-	70618	70618	16724991	4	344,294,300,285,	0,7966,9787,11537,
#Deleted in new
chr19_KI270933v1_alt	78584	82440	chr19_KI270933v1_alt:78584-82440	5	-	78584	78584	16724991	3	294,300,285,	0,1821,3571,
#Deleted in new
chr19_KI270933v1_alt	84576	99089	chr19_KI270933v1_alt:84576-99089	3	-	85089	99049	789624	8	690,53,102,51,294,300,36,74,	0,788,1303,5664,8868,10691,13439,14439,
#Deleted in new
chr19_KI270933v1_alt	85028	99075	chr19_KI270933v1_alt:85028-99075	1	-	85089	99049	789624	9	238,53,102,78,51,294,300,36,60,	0,336,851,3708,5212,8416,10239,12987,13987,
#Deleted in new
chr19_KI270933v1_alt	101552	113927	chr19_KI270933v1_alt:101552-113927	7	-	101552	101552	16724991	8	156,53,105,294,299,282,36,83,	0,254,769,6625,8442,10193,11199,12292,
#Deleted in new
chr19_KI270933v1_alt	115848	130400	chr19_KI270933v1_alt:115848-130400	3	-	116381	130363	0	8	686,53,105,51,294,300,36,71,	0,784,1299,5667,8974,10781,13518,14481,
#Deleted in new
chr19_KI270933v1_alt	132781	144467	chr19_KI270933v1_alt:132781-144467	3	-	132812	144417	789624	8	157,53,105,294,300,285,36,84,	0,255,770,6346,8222,9795,10850,11602,
#Deleted in new
chr19_KI270933v1_alt	155460	160998	chr19_KI270933v1_alt:155460-160998	7	-	155460	155460	16724991	7	358,51,303,297,310,285,523,	0,506,3044,3602,4108,4567,5015,
#Deleted in new
chr19_KI270933v1_alt	155681	160312	chr19_KI270933v1_alt:155681-160312	5	-	155681	155681	16724991	6	137,51,303,297,310,285,	0,285,2823,3381,3887,4346,
#Deleted in new
chr19_KI270933v1_alt	164678	164962	chr19_KI270933v1_alt:164678-164962	7	-	164678	164678	16724991	1	284,	0,
#Deleted in new
chr19_KI270933v1_alt	168008	168321	chr19_KI270933v1_alt:168008-168321	7	-	168008	168008	16724991	2	138,45,	0,268,
#Deleted in new
chr19_KI270938v1_alt	15195	38320	chr19_KI270938v1_alt:15195-38320	0	-	16605	38144	789624	8	252,38,38,143,39,285,36,210,	0,950,1087,1398,10581,17477,17868,22915,
#Deleted in new
chr19_KI270938v1_alt	15199	38320	chr19_KI270938v1_alt:15199-38320	3	-	15327	38144	789624	9	248,38,38,28,93,39,285,36,210,	0,946,1083,1336,1444,10577,17473,17864,22911,
#Deleted in new
chr19_KI270938v1_alt	15226	38297	chr19_KI270938v1_alt:15226-38297	0	-	15226	15226	8553170	7	221,38,454,39,285,36,187,	0,919,1056,10550,17446,17837,22884,
#Deleted in new
chr19_KI270938v1_alt	15226	38297	chr19_KI270938v1_alt:15226-38297	1	-	15327	38144	789624	8	221,38,38,28,39,285,36,187,	0,919,1056,1309,10550,17446,17837,22884,
#Deleted in new
chr19_KI270938v1_alt	15316	38155	chr19_KI270938v1_alt:15316-38155	1	-	15327	38144	789624	6	131,38,38,28,93,45,	0,829,966,1219,1327,22794,
#Deleted in new
chr19_KI270938v1_alt	22732	38320	chr19_KI270938v1_alt:22732-38320	1	-	22732	38144	789624	5	38,39,285,36,210,	0,3044,9940,10331,15378,
#Deleted in new
chr19_KI270938v1_alt	44261	50926	chr19_KI270938v1_alt:44261-50926	1	-	44369	50640	789624	5	266,297,291,36,344,	0,4023,4927,5986,6321,
#Deleted in new
chr19_KI270938v1_alt	44313	55747	chr19_KI270938v1_alt:44313-55747	3	-	44369	55722	789624	5	214,297,291,36,59,	0,3971,4875,5934,11375,
#Deleted in new
chr19_KI270938v1_alt	69045	75196	chr19_KI270938v1_alt:69045-75196	1	-	70055	75196	0	3	1486,303,37,	0,2216,6114,
#Deleted in new
chr19_KI270938v1_alt	69047	75242	chr19_KI270938v1_alt:69047-75242	1	-	69598	75196	0	5	688,282,303,33,83,	0,1202,2214,5104,6112,
#Deleted in new
chr19_KI270938v1_alt	69047	75196	chr19_KI270938v1_alt:69047-75196	1	-	69598	75196	789624	6	688,282,304,14,33,37,	0,1202,2214,2520,5104,6112,
#Deleted in new
chr19_KI270938v1_alt	69047	77113	chr19_KI270938v1_alt:69047-77113	3	-	70055	75196	0	5	1484,303,33,196,39,	0,2214,5104,6112,8027,
#Deleted in new
chr19_KI270938v1_alt	69047	77107	chr19_KI270938v1_alt:69047-77107	1	-	70055	75196	0	4	1484,303,196,33,	0,2214,6112,8027,
#Deleted in new
chr19_KI270938v1_alt	69047	77107	chr19_KI270938v1_alt:69047-77107	1	-	70055	75196	0	6	1484,303,12,33,196,33,	0,2214,4946,5104,6112,8027,
#Deleted in new
chr19_KI270938v1_alt	69047	75219	chr19_KI270938v1_alt:69047-75219	1	-	70055	75196	0	5	1484,303,12,33,60,	0,2214,4946,5104,6112,
#Deleted in new
chr19_KI270938v1_alt	69047	75261	chr19_KI270938v1_alt:69047-75261	1	-	69598	75196	0	4	688,282,303,102,	0,1202,2214,6112,
#Deleted in new
chr19_KI270938v1_alt	69047	75196	chr19_KI270938v1_alt:69047-75196	1	-	69598	75196	0	6	688,282,303,12,33,37,	0,1202,2214,4946,5104,6112,
#Deleted in new
chr19_KI270938v1_alt	69047	77107	chr19_KI270938v1_alt:69047-77107	1	-	69598	75196	0	7	688,282,303,12,33,196,33,	0,1202,2214,4946,5104,6112,8027,
#Deleted in new
chr19_KI270938v1_alt	70151	75245	chr19_KI270938v1_alt:70151-75245	1	-	70245	75196	789624	4	380,130,33,86,	0,1110,4000,5008,
#Deleted in new
chr19_KI270938v1_alt	77148	81381	chr19_KI270938v1_alt:77148-81381	0	+	77299	80359	789624	6	161,75,107,78,94,151,	0,386,2868,3205,3624,4082,
#Deleted in new
chr19_KI270938v1_alt	77241	83124	chr19_KI270938v1_alt:77241-83124	0	+	77299	81322	0	5	68,75,78,168,265,	0,293,3112,3989,5618,
#Deleted in new
chr19_KI270938v1_alt	77257	81988	chr19_KI270938v1_alt:77257-81988	1	+	77299	81322	0	4	52,75,78,758,	0,277,3096,3973,
#Deleted in new
chr19_KI270938v1_alt	77272	81381	chr19_KI270938v1_alt:77272-81381	1	+	77299	80828	789624	5	37,75,78,94,151,	0,262,3081,3500,3958,
#Deleted in new
chr19_KI270938v1_alt	77275	81381	chr19_KI270938v1_alt:77275-81381	0	+	77299	80359	789624	5	34,75,107,78,151,	0,259,2741,3078,3955,
#Deleted in new
chr19_KI270938v1_alt	77275	80890	chr19_KI270938v1_alt:77275-80890	1	+	77299	80490	789624	3	34,75,537,	0,259,3078,
#Deleted in new
chr19_KI270938v1_alt	77289	81385	chr19_KI270938v1_alt:77289-81385	1	+	77299	81243	789624	4	30,75,78,155,	0,245,3064,3941,
#Deleted in new
chr19_KI270938v1_alt	77289	82953	chr19_KI270938v1_alt:77289-82953	3	+	77299	82942	789624	4	20,75,78,94,	0,245,3064,5570,
#Deleted in new
chr19_KI270938v1_alt	77297	81381	chr19_KI270938v1_alt:77297-81381	0	+	77297	77297	8553170	3	312,78,151,	0,3056,3933,
#Deleted in new
chr19_KI270938v1_alt	77305	81381	chr19_KI270938v1_alt:77305-81381	1	+	80397	81322	789624	4	75,75,78,151,	0,229,3048,3925,
#Deleted in new
chr19_KI270938v1_alt	77534	83146	chr19_KI270938v1_alt:77534-83146	0	+	77534	80828	789624	5	75,78,94,160,287,	0,2819,3238,3696,5325,
#Deleted in new
chr19_KI270938v1_alt	80384	81381	chr19_KI270938v1_alt:80384-81381	0	+	80384	80828	789624	3	47,94,198,	0,388,799,
#Deleted in new
chr19_KI270938v1_alt	81432	90168	chr19_KI270938v1_alt:81432-90168	3	-	81469	89762	789624	6	157,219,70,71,259,429,	0,1013,1313,3114,7502,8307,
#Deleted in new
chr19_KI270938v1_alt	81439	89778	chr19_KI270938v1_alt:81439-89778	0	-	82779	89762	789624	5	150,219,70,259,39,	0,1006,1306,7495,8300,
#Deleted in new
chr19_KI270938v1_alt	81439	89567	chr19_KI270938v1_alt:81439-89567	1	-	81469	89189	789624	6	150,219,70,71,259,35,	0,1006,1306,3107,7495,8093,
#Deleted in new
chr19_KI270938v1_alt	81439	89926	chr19_KI270938v1_alt:81439-89926	1	-	82468	89762	789624	6	150,38,70,71,259,187,	0,1006,1306,3107,7495,8300,
#Deleted in new
chr19_KI270938v1_alt	81439	89781	chr19_KI270938v1_alt:81439-89781	1	-	82468	89762	789624	6	150,182,70,71,259,42,	0,1006,1306,3107,7495,8300,
#Deleted in new
chr19_KI270938v1_alt	89902	106263	chr19_KI270938v1_alt:89902-106263	3	+	92771	105866	0	13	388,185,61,84,98,107,170,158,90,128,73,314,413,	0,2861,3163,6449,7086,8043,8338,9088,11113,12658,12890,13642,15948,
#Deleted in new
chr19_KI270938v1_alt	89949	106253	chr19_KI270938v1_alt:89949-106253	1	+	92771	105976	0	14	341,185,61,84,98,107,170,158,90,128,73,129,99,403,	0,2814,3116,6402,7039,7996,8291,9041,11066,12611,12843,13595,13810,15901,
#Deleted in new
chr19_KI270938v1_alt	90246	99146	chr19_KI270938v1_alt:90246-99146	0	+	92771	99146	789624	8	44,208,61,84,98,107,170,156,	0,2494,2819,6105,6742,7699,7994,8744,
#Deleted in new
chr19_KI270938v1_alt	90271	99122	chr19_KI270938v1_alt:90271-99122	0	+	92771	99122	789624	8	19,215,61,84,98,107,170,132,	0,2462,2794,6080,6717,7674,7969,8719,
#Deleted in new
chr19_KI270938v1_alt	90304	99075	chr19_KI270938v1_alt:90304-99075	0	+	92771	99075	789624	8	61,185,61,84,98,107,170,85,	0,2459,2761,6047,6684,7641,7936,8686,
#Deleted in new
chr19_KI270938v1_alt	92763	106253	chr19_KI270938v1_alt:92763-106253	1	+	92771	105976	789624	13	185,61,84,98,107,170,158,90,110,73,129,99,403,	0,302,3588,4225,5182,5477,6227,8252,9815,10029,10781,10996,13087,
#Deleted in new
chr19_KI270938v1_alt	92898	93304	chr19_KI270938v1_alt:92898-93304	0	+	92898	92898	8553170	2	50,239,	0,167,
#Deleted in new
chr19_KI270938v1_alt	92901	106253	chr19_KI270938v1_alt:92901-106253	0	+	92901	92901	8553170	11	47,61,84,98,107,170,158,90,305,314,403,	0,164,3450,4087,5044,5339,6089,8114,9659,10643,12949,
#Deleted in new
chr19_KI270938v1_alt	93105	102685	chr19_KI270938v1_alt:93105-102685	0	+	93105	93105	8553170	8	21,84,98,107,170,158,118,125,	0,3246,3883,4840,5135,5885,7882,9455,
#Deleted in new
chr19_KI270938v1_alt	94003	99835	chr19_KI270938v1_alt:94003-99835	3	-	94003	94003	8553170	4	882,80,344,2852,	0,2324,2551,2980,
#Deleted in new
chr19_KI270938v1_alt	112556	130532	chr19_KI270938v1_alt:112556-130532	3	+	117827	130258	0	18	266,75,68,75,90,129,96,220,134,57,388,124,199,100,199,133,126,373,	0,5221,5411,5734,5952,6298,6529,7890,8202,8893,10439,10911,11851,14519,14721,15160,16008,17603,
#Deleted in new
chr19_KI270938v1_alt	112615	130531	chr19_KI270938v1_alt:112615-130531	0	+	112615	112615	8553170	16	207,75,68,75,475,96,220,134,57,388,124,199,100,199,133,1967,	0,5162,5352,5675,5893,6470,7831,8143,8834,10380,10852,11792,14460,14662,15101,15949,
#Deleted in new
chr19_KI270938v1_alt	116224	130531	chr19_KI270938v1_alt:116224-130531	1	+	117827	130258	0	17	1628,68,75,90,129,96,220,134,57,388,124,199,100,199,133,126,372,	0,1743,2066,2284,2630,2861,4222,4534,5225,6771,7243,8183,10851,11053,11492,12340,13935,
#Deleted in new
chr19_KI270938v1_alt	118578	123545	chr19_KI270938v1_alt:118578-123545	0	+	118578	123545	789624	8	20,129,96,223,134,57,388,78,	0,276,507,1865,2180,2871,4417,4889,
#Deleted in new
chr19_KI270938v1_alt	118585	130532	chr19_KI270938v1_alt:118585-130532	0	+	118585	120471	789624	15	13,129,96,276,134,57,388,124,199,100,199,133,213,344,373,	0,269,500,1805,2173,2864,4410,4882,5822,8490,8692,9131,9445,9761,11574,
#Deleted in new
chr19_KI270938v1_alt	118853	130531	chr19_KI270938v1_alt:118853-130531	1	+	120506	128355	789624	14	130,96,276,134,57,388,124,199,100,199,133,213,344,372,	0,232,1537,1905,2596,4142,4614,5554,8222,8424,8863,9177,9493,11306,
#Deleted in new
chr19_KI270938v1_alt	124407	129305	chr19_KI270938v1_alt:124407-129305	0	+	124407	128901	789624	6	199,100,199,133,126,512,	0,2668,2870,3309,4157,4386,
#Deleted in new
chr19_KI270938v1_alt	124577	128669	chr19_KI270938v1_alt:124577-128669	0	+	124577	124577	8553170	5	29,100,199,133,323,	0,2498,2700,3139,3769,
#Deleted in new
chr19_KI270938v1_alt	127852	130532	chr19_KI270938v1_alt:127852-130532	0	+	127852	127852	8553170	2	80,1968,	0,712,
#Deleted in new
chr19_KI270938v1_alt	128573	130532	chr19_KI270938v1_alt:128573-130532	0	+	128573	130258	789624	2	117,424,	0,1535,
#Deleted in new
chr19_KI270938v1_alt	130489	134559	chr19_KI270938v1_alt:130489-134559	3	-	130571	134546	789624	4	302,263,180,145,	0,1124,2643,3925,
#Deleted in new
chr19_KI270938v1_alt	134958	135500	chr19_KI270938v1_alt:134958-135500	0	-	134958	134958	8553170	2	267,183,	0,359,
#Deleted in new
chr19_KI270938v1_alt	134958	139564	chr19_KI270938v1_alt:134958-139564	0	-	134958	134958	8553170	9	267,79,156,131,184,98,127,235,283,	0,359,770,1022,1993,2561,2921,3540,4323,
#Deleted in new
chr19_KI270938v1_alt	134958	135823	chr19_KI270938v1_alt:134958-135823	0	-	135388	135823	789624	3	267,144,95,	0,359,770,
#Deleted in new
chr19_KI270938v1_alt	134958	147979	chr19_KI270938v1_alt:134958-147979	1	-	135156	147926	789624	15	267,79,156,131,184,98,127,164,168,148,122,233,149,214,132,	0,359,770,1022,1993,2561,2921,3611,4323,5308,8052,8329,9405,11794,12889,
#Deleted in new
chr19_KI270938v1_alt	135015	148058	chr19_KI270938v1_alt:135015-148058	3	-	135156	147926	789624	15	210,79,156,131,184,98,127,164,168,148,122,233,149,232,211,	0,302,713,965,1936,2504,2864,3554,4266,5251,7995,8272,9348,11737,12832,
#Deleted in new
chr19_KI270938v1_alt	137075	138114	chr19_KI270938v1_alt:137075-138114	0	-	137075	137075	8553170	3	60,98,235,	0,444,804,
#Deleted in new
chr19_KI270938v1_alt	137954	147968	chr19_KI270938v1_alt:137954-147968	0	-	137954	137954	8553170	4	52,149,214,121,	0,6409,8798,9893,
#Deleted in new
chr19_KI270938v1_alt	139386	146832	chr19_KI270938v1_alt:139386-146832	0	-	139386	139386	8553170	5	63,122,233,149,80,	0,3624,3901,4977,7366,
#Deleted in new
chr19_KI270938v1_alt	139399	143322	chr19_KI270938v1_alt:139399-143322	0	-	139399	139399	8553170	3	50,148,312,	0,867,3611,
#Deleted in new
chr19_KI270938v1_alt	143010	146966	chr19_KI270938v1_alt:143010-146966	0	-	143010	146966	789624	4	122,233,149,214,	0,277,1353,3742,
#Deleted in new
chr19_KI270938v1_alt	148219	164408	chr19_KI270938v1_alt:148219-164408	0	-	158670	163476	789624	7	1020,177,361,160,130,79,106,	0,5376,7384,10298,14965,15181,16083,
#Deleted in new
chr19_KI270938v1_alt	148222	164780	chr19_KI270938v1_alt:148222-164780	1	-	148851	163476	789624	8	1017,177,361,160,127,130,79,478,	0,5373,7381,10295,13934,14962,15178,16080,
#Deleted in new
chr19_KI270938v1_alt	148222	164533	chr19_KI270938v1_alt:148222-164533	1	-	148851	163298	789624	6	1017,177,361,160,130,231,	0,5373,7381,10295,14962,16080,
#Deleted in new
chr19_KI270938v1_alt	148226	155621	chr19_KI270938v1_alt:148226-155621	0	-	148226	148226	8553170	2	1013,2026,	0,5369,
#Deleted in new
chr19_KI270938v1_alt	148881	163246	chr19_KI270938v1_alt:148881-163246	0	-	149216	163246	789624	4	358,160,127,62,	0,9636,13275,14303,
#Deleted in new
chr19_KI270938v1_alt	153167	164637	chr19_KI270938v1_alt:153167-164637	1	-	153591	163476	789624	7	605,361,160,127,130,79,335,	0,2436,5350,8989,10017,10233,11135,
#Deleted in new
chr19_KI270938v1_alt	154493	158631	chr19_KI270938v1_alt:154493-158631	0	-	155533	158631	789624	2	1471,114,	0,4024,
#Deleted in new
chr19_KI270938v1_alt	155689	164260	chr19_KI270938v1_alt:155689-164260	0	-	155689	163476	789624	6	275,160,127,130,79,105,	0,2828,6467,7495,7711,8466,
#Deleted in new
chr19_KI270938v1_alt	155946	164309	chr19_KI270938v1_alt:155946-164309	2	-	155946	163476	789624	6	18,160,127,130,79,43,	0,2571,6210,7238,7454,8320,
#Deleted in new
chr19_KI270938v1_alt	155954	163380	chr19_KI270938v1_alt:155954-163380	0	-	155954	155954	8553170	4	10,160,127,196,	0,2563,6202,7230,
#Deleted in new
chr19_KI270938v1_alt	158517	164514	chr19_KI270938v1_alt:158517-164514	0	-	158517	158517	8553170	4	160,127,130,212,	0,3639,4667,5785,
#Deleted in new
chr19_KI270938v1_alt	161951	164325	chr19_KI270938v1_alt:161951-164325	0	-	161951	161951	8553170	4	332,130,79,23,	0,1233,1449,2351,
#Deleted in new
chr19_KI270938v1_alt	162281	164534	chr19_KI270938v1_alt:162281-164534	0	-	162281	162281	8553170	4	24,130,79,232,	0,903,1119,2021,
#Deleted in new
chr19_KI270938v1_alt	164902	167320	chr19_KI270938v1_alt:164902-167320	0	+	166329	167320	789624	4	225,247,244,240,	0,1423,1783,2178,
#Deleted in new
chr19_KI270938v1_alt	165251	168699	chr19_KI270938v1_alt:165251-168699	3	+	165331	168640	789624	6	85,247,244,258,144,109,	0,1074,1434,1829,2892,3339,
#Deleted in new
chr19_KI270938v1_alt	165308	168635	chr19_KI270938v1_alt:165308-168635	0	+	165308	165308	8553170	3	1621,258,492,	0,1772,2835,
#Deleted in new
chr19_KI270938v1_alt	165310	168635	chr19_KI270938v1_alt:165310-168635	1	+	166329	168331	789624	5	105,247,244,258,492,	0,1015,1375,1770,2833,
#Deleted in new
chr19_KI270938v1_alt	165695	168635	chr19_KI270938v1_alt:165695-168635	1	+	166329	168331	789624	5	307,247,244,258,492,	0,630,990,1385,2448,
#Deleted in new
chr19_KI270938v1_alt	166238	168634	chr19_KI270938v1_alt:166238-168634	1	+	166329	168331	789624	4	334,244,258,491,	0,447,842,1905,
#Deleted in new
chr19_KI270938v1_alt	174434	174952	chr19_KI270938v1_alt:174434-174952	3	-	174434	174434	8553170	2	303,107,	0,411,
#Deleted in new
chr19_KI270938v1_alt	175723	182629	chr19_KI270938v1_alt:175723-182629	3	+	176166	182557	0	5	147,122,123,187,250,	0,418,745,5534,6656,
#Deleted in new
chr19_KI270938v1_alt	175790	181829	chr19_KI270938v1_alt:175790-181829	0	+	175790	175790	8553170	4	80,122,123,572,	0,351,678,5467,
#Deleted in new
chr19_KI270938v1_alt	175839	223976	chr19_KI270938v1_alt:175839-223976	0	+	176166	206744	789624	5	31,122,123,196,1912,	0,302,629,30891,46225,
#Deleted in new
chr19_KI270938v1_alt	175839	181547	chr19_KI270938v1_alt:175839-181547	1	+	176166	181547	789624	5	31,122,123,187,13,	0,302,629,5418,5695,
#Deleted in new
chr19_KI270938v1_alt	175852	182504	chr19_KI270938v1_alt:175852-182504	0	+	176166	181547	789624	6	23,122,123,187,172,125,	0,289,616,5405,5682,6527,
#Deleted in new
chr19_KI270938v1_alt	175853	182629	chr19_KI270938v1_alt:175853-182629	0	+	176166	181547	789624	6	90,122,123,187,172,250,	0,288,615,5404,5681,6526,
#Deleted in new
chr19_KI270938v1_alt	175853	182629	chr19_KI270938v1_alt:175853-182629	1	+	176166	182557	0	5	90,122,123,187,250,	0,288,615,5404,6526,
#Deleted in new
chr19_KI270938v1_alt	175853	182629	chr19_KI270938v1_alt:175853-182629	1	+	176166	181547	789624	5	90,122,123,187,1095,	0,288,615,5404,5681,
#Deleted in new
chr19_KI270938v1_alt	175855	182629	chr19_KI270938v1_alt:175855-182629	1	+	176166	182399	789624	4	15,122,123,250,	0,286,613,6524,
#Deleted in new
chr19_KI270938v1_alt	175860	182626	chr19_KI270938v1_alt:175860-182626	0	+	175860	175860	8553170	5	15,122,123,449,247,	0,281,608,5397,6519,
#Deleted in new
chr19_KI270938v1_alt	176114	182629	chr19_KI270938v1_alt:176114-182629	1	+	176166	182557	0	4	149,123,187,250,	0,354,5143,6265,
#Deleted in new
chr19_KI270938v1_alt	176141	182612	chr19_KI270938v1_alt:176141-182612	1	+	176166	181508	789624	3	122,123,1355,	0,327,5116,
#Deleted in new
chr19_KI270938v1_alt	176141	176990	chr19_KI270938v1_alt:176141-176990	0	+	176141	176141	8553170	2	122,522,	0,327,
#Deleted in new
chr19_KI270938v1_alt	184073	184400	chr19_KI270938v1_alt:184073-184400	7	-	184073	184073	16724991	1	327,	0,
#Deleted in new
chr19_KI270938v1_alt	191637	197964	chr19_KI270938v1_alt:191637-197964	0	-	196768	197962	789624	14	585,156,53,38,76,117,51,303,297,169,217,285,36,36,	0,664,1706,1990,2108,2474,3501,3874,4431,4966,5262,5626,6095,6291,
#Deleted in new
chr19_KI270938v1_alt	191847	198042	chr19_KI270938v1_alt:191847-198042	3	-	192075	197962	789624	13	375,156,53,38,76,117,51,303,297,303,285,36,114,	0,454,1496,1780,1898,2264,3291,3664,4221,4966,5416,5885,6081,
#Deleted in new
chr19_KI270938v1_alt	191910	197964	chr19_KI270938v1_alt:191910-197964	0	-	196355	197962	789624	12	312,156,38,76,117,51,303,297,217,285,36,36,	0,391,1717,1835,2201,3228,3601,4158,4989,5353,5822,6018,
#Deleted in new
chr19_KI270938v1_alt	191910	197964	chr19_KI270938v1_alt:191910-197964	1	-	192075	197962	789624	14	312,156,53,38,76,117,51,51,303,297,303,285,36,36,	0,391,1433,1717,1835,2201,2941,3228,3601,4158,4903,5353,5822,6018,
#Deleted in new
chr19_KI270938v1_alt	192078	192681	chr19_KI270938v1_alt:192078-192681	0	-	192078	192078	8553170	2	144,380,	0,223,
#Deleted in new
chr19_KI270938v1_alt	193577	194338	chr19_KI270938v1_alt:193577-194338	0	-	193577	193577	8553170	3	88,76,227,	0,168,534,
#Deleted in new
chr19_KI270938v1_alt	194824	197993	chr19_KI270938v1_alt:194824-197993	1	-	195401	197962	789624	6	990,297,303,285,36,65,	0,1244,1989,2439,2908,3104,
#Deleted in new
chr19_KI270938v1_alt	197263	198073	chr19_KI270938v1_alt:197263-198073	0	-	197263	197263	8553170	2	285,341,	0,469,
#Deleted in new
chr19_KI270938v1_alt	199508	199867	chr19_KI270938v1_alt:199508-199867	3	+	199508	199508	8553170	1	359,	0,
#Deleted in new
chr19_KI270938v1_alt	204024	205202	chr19_KI270938v1_alt:204024-205202	7	+	204024	204024	16724991	2	538,363,	0,815,
#Deleted in new
chr19_KI270938v1_alt	211581	217731	chr19_KI270938v1_alt:211581-217731	0	-	216107	217714	789624	10	602,128,268,51,303,297,217,285,36,51,	0,1894,2230,3309,3682,4239,5070,5434,5903,6099,
#Deleted in new
chr19_KI270938v1_alt	213538	217754	chr19_KI270938v1_alt:213538-217754	3	-	213942	217714	789624	8	541,51,303,297,303,285,36,74,	0,1352,1725,2282,3027,3477,3946,4142,
#Deleted in new
chr19_KI270938v1_alt	213942	217825	chr19_KI270938v1_alt:213942-217825	1	-	213942	217714	789624	7	137,51,303,303,285,36,145,	0,948,1321,2623,3073,3542,3738,
#Deleted in new
chr19_KI270938v1_alt	214611	217745	chr19_KI270938v1_alt:214611-217745	0	-	214611	214611	8553170	6	955,297,303,285,36,65,	0,1209,1954,2404,2873,3069,
#Deleted in new
chr19_KI270938v1_alt	214611	217745	chr19_KI270938v1_alt:214611-217745	1	-	214684	217714	789624	7	330,303,297,303,285,36,65,	0,652,1209,1954,2404,2873,3069,
#Deleted in new
chr19_KI270938v1_alt	214868	217716	chr19_KI270938v1_alt:214868-217716	0	-	216520	217714	789624	8	73,303,297,169,217,285,36,36,	0,395,952,1487,1783,2147,2616,2812,
#Deleted in new
chr19_KI270938v1_alt	214868	217716	chr19_KI270938v1_alt:214868-217716	0	-	216107	217714	789624	7	73,303,297,217,285,36,36,	0,395,952,1783,2147,2616,2812,
#Deleted in new
chr19_KI270938v1_alt	221066	222295	chr19_KI270938v1_alt:221066-222295	7	-	221066	221066	16724991	3	38,76,105,	0,104,1124,
#Deleted in new
chr19_KI270938v1_alt	225382	232248	chr19_KI270938v1_alt:225382-232248	1	-	225879	232170	789624	13	764,53,38,64,117,51,51,303,297,273,285,36,112,	0,1648,1960,2080,2465,3612,3959,4329,4880,5637,6083,6555,6754,
#Deleted in new
chr19_KI270938v1_alt	225386	232281	chr19_KI270938v1_alt:225386-232281	3	-	225763	232170	789624	13	524,53,38,64,117,51,51,303,297,300,285,36,145,	0,1644,1956,2076,2461,3608,3955,4325,4876,5633,6079,6551,6750,
#Deleted in new
chr19_KI270938v1_alt	225402	232269	chr19_KI270938v1_alt:225402-232269	0	-	225402	225402	8553170	12	744,53,38,64,1198,51,303,297,300,169,36,133,	0,1628,1940,2060,2445,3939,4309,4860,5617,6063,6535,6734,
#Deleted in new
chr19_KI270938v1_alt	225444	232239	chr19_KI270938v1_alt:225444-232239	1	-	225763	232170	789624	12	466,53,38,64,117,51,51,303,297,285,36,103,	0,1586,1898,2018,2403,3550,3897,4267,4818,6021,6493,6692,
#Deleted in new
chr19_KI270938v1_alt	225446	232269	chr19_KI270938v1_alt:225446-232269	1	-	225763	232170	789624	13	464,53,38,64,117,48,51,303,297,300,285,36,133,	0,1584,1896,2016,2401,3548,3895,4265,4816,5573,6019,6491,6690,
#Deleted in new
chr19_KI270938v1_alt	225523	232222	chr19_KI270938v1_alt:225523-232222	0	-	225523	225523	8553170	3	4491,297,757,	0,4739,5942,
#Deleted in new
chr19_KI270938v1_alt	238918	239021	chr19_KI270938v1_alt:238918-239021	3	-	238918	238918	8553170	1	103,	0,
#Deleted in new
chr19_KI270938v1_alt	242972	244013	chr19_KI270938v1_alt:242972-244013	7	+	242972	242972	16724991	2	528,121,	0,920,
#Deleted in new
chr19_KI270938v1_alt	248788	255852	chr19_KI270938v1_alt:248788-255852	1	-	249650	255465	789624	13	1009,53,38,76,123,48,51,303,297,303,285,82,80,	0,2130,2443,2560,2986,3729,4068,4439,4992,5525,5971,6643,6984,
#Deleted in new
chr19_KI270938v1_alt	248789	256147	chr19_KI270938v1_alt:248789-256147	1	-	249650	254766	0	13	1008,53,38,76,123,51,51,303,297,303,170,82,218,	0,2129,2442,2559,2985,3728,4067,4438,4991,5524,5970,6642,7140,
#Deleted in new
chr19_KI270938v1_alt	248789	256147	chr19_KI270938v1_alt:248789-256147	1	-	249650	255465	0	14	1008,53,38,76,123,51,51,303,297,303,285,36,82,218,	0,2129,2442,2559,2985,3728,4067,4438,4991,5524,5970,6443,6642,7140,
#Deleted in new
chr19_KI270938v1_alt	248789	255506	chr19_KI270938v1_alt:248789-255506	1	-	250959	255465	0	12	1008,53,38,123,51,51,303,297,303,285,36,75,	0,2129,2442,2985,3728,4067,4438,4991,5524,5970,6443,6642,
#Deleted in new
chr19_KI270938v1_alt	248789	255852	chr19_KI270938v1_alt:248789-255852	3	-	249650	255465	0	14	1008,53,38,76,123,48,51,303,297,303,285,36,82,80,	0,2129,2442,2559,2985,3728,4067,4438,4991,5524,5970,6443,6642,6983,
#Deleted in new
chr19_KI270938v1_alt	249319	256153	chr19_KI270938v1_alt:249319-256153	1	-	249650	255932	789624	13	478,53,38,76,123,48,51,303,297,303,285,82,224,	0,1599,1912,2029,2455,3198,3537,3908,4461,4994,5440,6112,6610,
#Deleted in new
chr19_KI270938v1_alt	249400	256066	chr19_KI270938v1_alt:249400-256066	0	-	249400	249400	8553170	13	397,53,38,76,794,51,303,297,303,285,36,82,137,	0,1518,1831,1948,2374,3456,3827,4380,4913,5359,5832,6031,6529,
#Deleted in new
chr19_KI270938v1_alt	249433	253512	chr19_KI270938v1_alt:249433-253512	0	-	251223	253512	789624	8	364,53,55,76,123,51,51,285,	0,1485,1781,1915,2341,3084,3423,3794,
#Deleted in new
chr19_KI270938v1_alt	249433	256153	chr19_KI270938v1_alt:249433-256153	1	-	249650	255932	789624	13	364,53,38,76,123,51,51,303,297,303,285,82,224,	0,1485,1798,1915,2341,3084,3423,3794,4347,4880,5326,5998,6496,
#Deleted in new
chr19_KI270938v1_alt	249433	255467	chr19_KI270938v1_alt:249433-255467	1	-	250959	255465	789624	11	364,53,38,123,51,51,303,297,303,285,36,	0,1485,1798,2341,3084,3423,3794,4347,4880,5326,5998,
#Deleted in new
chr19_KI270938v1_alt	268757	275852	chr19_KI270938v1_alt:268757-275852	3	-	269015	275287	789624	10	382,34,51,303,297,303,288,36,82,135,	0,542,2410,4283,4839,5372,5822,6299,6496,6960,
#Deleted in new
chr19_KI270938v1_alt	269015	269333	chr19_KI270938v1_alt:269015-269333	7	-	269015	269015	16724991	2	119,51,	0,267,
#Deleted in new
chr19_KI270938v1_alt	270967	275379	chr19_KI270938v1_alt:270967-275379	1	-	271159	275287	0	7	251,303,297,303,288,36,126,	0,2073,2629,3162,3612,4089,4286,
#Deleted in new
chr19_KI270938v1_alt	270970	275287	chr19_KI270938v1_alt:270970-275287	1	-	271159	275287	0	7	248,303,297,111,288,36,34,	0,2070,2626,3351,3609,4086,4283,
#Deleted in new
chr19_KI270938v1_alt	271167	275840	chr19_KI270938v1_alt:271167-275840	0	-	271167	275720	789624	6	51,303,288,36,82,123,	0,2962,3412,3889,4086,4550,
#Deleted in new
chr19_KI270938v1_alt	279827	280537	chr19_KI270938v1_alt:279827-280537	7	-	279827	279827	16724991	3	286,36,34,	0,478,676,
#Deleted in new
chr19_KI270938v1_alt	284160	288423	chr19_KI270938v1_alt:284160-288423	7	-	284160	284160	16724991	2	118,286,	0,3977,
#Deleted in new
chr19_KI270938v1_alt	289466	295523	chr19_KI270938v1_alt:289466-295523	3	-	289811	295403	0	7	482,51,303,285,36,85,123,	0,630,4331,4781,5252,5454,5934,
#Deleted in new
chr19_KI270938v1_alt	289652	295458	chr19_KI270938v1_alt:289652-295458	1	-	289811	295403	0	6	296,51,303,285,85,58,	0,444,4145,4595,5268,5748,
#Deleted in new
chr19_KI270938v1_alt	289857	294047	chr19_KI270938v1_alt:289857-294047	0	-	289857	289857	8553170	2	290,250,	0,3940,
#Deleted in new
chr19_KI270938v1_alt	291295	319553	chr19_KI270938v1_alt:291295-319553	3	-	291295	291295	8553170	8	661,239,85,167,156,51,51,328,	0,1393,3625,11510,21190,23606,25004,27930,
#Deleted in new
chr19_KI270938v1_alt	293548	295475	chr19_KI270938v1_alt:293548-295475	0	-	293548	293548	8553170	4	552,285,85,75,	0,699,1372,1852,
#Deleted in new
chr19_KI270938v1_alt	293666	295482	chr19_KI270938v1_alt:293666-295482	0	-	293666	293666	8553170	5	434,285,36,85,82,	0,581,1052,1254,1734,
#Deleted in new
chr19_KI270938v1_alt	302589	303603	chr19_KI270938v1_alt:302589-303603	7	-	302589	302589	16724991	1	1014,	0,
#Deleted in new
chr19_KI270938v1_alt	310657	313820	chr19_KI270938v1_alt:310657-313820	7	-	310657	310657	16724991	5	274,221,297,141,134,	0,1311,1828,2273,3029,
#Deleted in new
chr19_KI270938v1_alt	315569	321535	chr19_KI270938v1_alt:315569-321535	3	-	315956	321478	789624	7	581,51,303,300,285,36,91,	0,730,3656,4751,5211,5681,5875,
#Deleted in new
chr19_KI270938v1_alt	315806	321535	chr19_KI270938v1_alt:315806-321535	1	-	315956	321478	789624	8	344,51,303,297,300,285,36,91,	0,493,3419,3978,4514,4974,5444,5638,
#Deleted in new
chr19_KI270938v1_alt	315925	321500	chr19_KI270938v1_alt:315925-321500	0	-	315925	315925	8553170	7	225,51,303,297,300,285,250,	0,374,3300,3859,4395,4855,5325,
#Deleted in new
chr19_KI270938v1_alt	334104	347678	chr19_KI270938v1_alt:334104-347678	1	-	337990	347525	0	10	4033,53,38,43,129,39,51,294,36,187,	0,4572,4848,4974,5109,5546,8638,9532,12911,13387,
#Deleted in new
chr19_KI270938v1_alt	336346	353279	chr19_KI270938v1_alt:336346-353279	3	-	337990	352998	789624	9	1791,53,38,43,129,39,51,294,297,	0,2330,2606,2732,2867,3304,6396,7290,16636,
#Deleted in new
chr19_KI270938v1_alt	337397	347716	chr19_KI270938v1_alt:337397-347716	1	-	337990	347525	0	9	740,53,38,43,129,39,291,36,225,	0,1279,1555,1681,1816,2253,6239,9618,10094,
#Deleted in new
chr19_KI270938v1_alt	337397	347586	chr19_KI270938v1_alt:337397-347586	1	-	337990	347525	0	9	740,53,38,43,129,39,294,36,95,	0,1279,1555,1681,1816,2253,6239,9618,10094,
#Deleted in new
chr19_KI270938v1_alt	337397	340070	chr19_KI270938v1_alt:337397-340070	0	-	337397	337397	8553170	5	740,53,38,43,857,	0,1279,1555,1681,1816,
#Deleted in new
chr19_KI270938v1_alt	337496	353172	chr19_KI270938v1_alt:337496-353172	1	-	337990	352998	789624	10	641,53,38,43,129,39,51,291,36,190,	0,1180,1456,1582,1717,2154,5246,6140,9519,15486,
#Deleted in new
chr19_KI270938v1_alt	337864	347605	chr19_KI270938v1_alt:337864-347605	0	-	337864	337864	8553170	7	273,53,390,39,294,36,114,	0,812,1088,1786,5772,9151,9627,
#Deleted in new
chr19_KI270938v1_alt	337923	343914	chr19_KI270938v1_alt:337923-343914	0	-	337923	337923	8553170	6	214,53,169,129,39,184,	0,753,1029,1290,1727,5807,
#Deleted in new
chr19_KI270938v1_alt	337980	347591	chr19_KI270938v1_alt:337980-347591	0	-	339318	347525	789624	9	157,53,38,43,129,39,200,36,100,	0,696,972,1098,1233,1670,5750,9035,9511,
#Deleted in new
chr19_KI270938v1_alt	337989	347528	chr19_KI270938v1_alt:337989-347528	0	-	337989	337989	8553170	8	148,53,169,129,39,294,36,37,	0,687,963,1224,1661,5647,9026,9502,
#Deleted in new
chr19_KI270938v1_alt	338068	347557	chr19_KI270938v1_alt:338068-347557	0	-	338068	338068	789624	9	69,53,38,43,129,39,200,192,66,	0,608,884,1010,1145,1582,5662,8947,9423,
#Deleted in new
chr19_KI270938v1_alt	338702	347811	chr19_KI270938v1_alt:338702-347811	0	-	338702	338702	8553170	8	27,38,43,129,39,200,36,61,	0,250,376,511,948,5028,8313,9048,
#Deleted in new
chr19_KI270938v1_alt	338959	347588	chr19_KI270938v1_alt:338959-347588	0	-	339642	347525	789624	7	31,43,129,255,294,36,97,	0,119,254,475,4677,8056,8532,
#Deleted in new
chr19_KI270938v1_alt	339008	340352	chr19_KI270938v1_alt:339008-340352	0	-	339008	339008	8553170	3	113,129,702,	0,205,642,
#Deleted in new
chr19_KI270938v1_alt	339279	347820	chr19_KI270938v1_alt:339279-347820	0	-	339279	339279	8553170	5	63,39,291,36,70,	0,371,4357,7736,8471,
#Deleted in new
chr19_KI270938v1_alt	339307	347652	chr19_KI270938v1_alt:339307-347652	0	-	343899	347525	789624	5	35,39,328,36,161,	0,343,4329,7708,8184,
#Deleted in new
chr19_KI270938v1_alt	339330	347652	chr19_KI270938v1_alt:339330-347652	0	-	343899	347525	789624	5	12,39,234,36,161,	0,320,4400,7685,8161,
#Deleted in new
chr19_KI270938v1_alt	340724	343670	chr19_KI270938v1_alt:340724-343670	0	-	341191	343670	789624	3	622,51,34,	0,2018,2912,
#Deleted in new
chr19_KI270938v1_alt	343520	347570	chr19_KI270938v1_alt:343520-347570	0	-	343520	343520	8553170	3	444,36,79,	0,3495,3971,
#Deleted in new
chr19_KI270938v1_alt	343636	347835	chr19_KI270938v1_alt:343636-347835	0	-	343636	343636	8553170	3	294,192,344,	0,3379,3855,
#Deleted in new
chr19_KI270938v1_alt	343679	347652	chr19_KI270938v1_alt:343679-347652	0	-	343679	343679	8553170	3	285,192,161,	0,3336,3812,
#Deleted in new
chr19_KI270938v1_alt	343680	351320	chr19_KI270938v1_alt:343680-351320	0	-	343680	343680	8553170	3	250,36,288,	0,3335,7352,
#Deleted in new
chr19_KI270938v1_alt	350909	351421	chr19_KI270938v1_alt:350909-351421	0	-	350909	350909	8553170	1	512,	0,
#Deleted in new
chr19_KI270938v1_alt	362206	362678	chr19_KI270938v1_alt:362206-362678	7	+	362206	362206	16724991	1	472,	0,
#Deleted in new
chr19_KI270938v1_alt	397718	419194	chr19_KI270938v1_alt:397718-419194	3	+	397840	418423	789624	14	248,179,112,221,96,73,76,56,93,93,143,46,84,568,	0,3697,5846,6759,11245,13880,14455,15123,15386,15672,20117,20403,20663,20908,
#Deleted in new
chr19_KI270938v1_alt	397737	418978	chr19_KI270938v1_alt:397737-418978	1	+	397840	418423	789624	14	229,179,112,221,96,73,76,56,93,93,143,46,81,352,	0,3678,5827,6740,11226,13861,14436,15104,15367,15653,20098,20384,20647,20889,
#Deleted in new
chr19_KI270938v1_alt	397778	418452	chr19_KI270938v1_alt:397778-418452	0	+	397840	401461	789624	13	198,136,179,112,221,96,73,76,93,93,143,46,71,	0,1298,3637,5786,6699,11185,13820,14395,15326,15612,20057,20343,20603,
#Deleted in new
chr19_KI270938v1_alt	397799	419013	chr19_KI270938v1_alt:397799-419013	0	+	397840	398358	789624	15	167,869,179,112,221,96,73,76,56,93,93,143,46,81,387,	0,544,3616,5765,6678,11164,13799,14374,15042,15305,15591,20036,20322,20585,20827,
#Deleted in new
chr19_KI270938v1_alt	397813	419010	chr19_KI270938v1_alt:397813-419010	1	+	397840	418660	789624	13	153,179,112,221,96,73,76,56,93,93,143,81,384,	0,3602,5751,6664,11150,13785,14360,15028,15291,15577,20022,20571,20813,
#Deleted in new
chr19_KI270938v1_alt	399177	401960	chr19_KI270938v1_alt:399177-401960	0	+	399177	399177	8553170	2	35,545,	0,2238,
#Deleted in new
chr19_KI270938v1_alt	400549	401824	chr19_KI270938v1_alt:400549-401824	0	+	400549	400549	8553170	3	451,179,86,	0,866,1189,
#Deleted in new
chr19_KI270938v1_alt	401483	416004	chr19_KI270938v1_alt:401483-416004	0	+	401483	401483	8553170	9	347,112,212,96,73,76,56,93,2614,	0,2081,3003,7480,10115,10690,11358,11621,11907,
#Deleted in new
chr19_KI270938v1_alt	402955	409024	chr19_KI270938v1_alt:402955-409024	0	+	402955	402955	8553170	4	165,112,221,61,	0,609,1522,6008,
#Deleted in new
chr19_KI270938v1_alt	402986	411645	chr19_KI270938v1_alt:402986-411645	0	+	402986	402986	8553170	5	103,112,221,96,47,	0,578,1491,5977,8612,
#Deleted in new
chr19_KI270938v1_alt	408764	419013	chr19_KI270938v1_alt:408764-419013	0	+	408764	408764	8553170	11	93,96,73,76,56,93,93,143,46,84,387,	0,199,2834,3409,4077,4340,4626,9071,9357,9617,9862,
#Deleted in new
chr19_KI270938v1_alt	412945	416992	chr19_KI270938v1_alt:412945-416992	3	-	412945	412945	8553170	2	472,57,	0,3990,
#Deleted in new
chr19_KI270938v1_alt	420305	420642	chr19_KI270938v1_alt:420305-420642	3	-	420305	420305	8553170	1	337,	0,
#Deleted in new
chr19_KI270938v1_alt	420960	421840	chr19_KI270938v1_alt:420960-421840	3	-	420960	420960	8553170	1	880,	0,
#Deleted in new
chr19_KI270938v1_alt	427104	431306	chr19_KI270938v1_alt:427104-431306	3	-	427104	427104	789624	3	367,51,453,	0,3352,3749,
#Deleted in new
chr19_KI270938v1_alt	427327	430894	chr19_KI270938v1_alt:427327-430894	1	-	427327	427327	8553170	2	144,438,	0,3129,
#Deleted in new
chr19_KI270938v1_alt	430456	431337	chr19_KI270938v1_alt:430456-431337	0	-	430456	430456	8553170	2	51,413,	0,468,
#Deleted in new
chr19_KI270938v1_alt	431178	444126	chr19_KI270938v1_alt:431178-444126	1	+	433635	444126	789624	16	424,93,175,102,253,142,204,279,141,286,102,69,130,254,141,30,	0,2402,3205,3765,5544,6065,6478,7081,7439,7750,8861,9048,9217,9428,12667,12918,
#Deleted in new
chr19_KI270938v1_alt	431491	436916	chr19_KI270938v1_alt:431491-436916	0	+	434399	436916	789624	4	111,175,102,194,	0,2892,3452,5231,
#Deleted in new
chr19_KI270938v1_alt	431509	436894	chr19_KI270938v1_alt:431509-436894	0	+	433635	436894	789624	6	89,93,175,102,111,172,	0,2071,2874,3434,4329,5213,
#Deleted in new
chr19_KI270938v1_alt	431513	444310	chr19_KI270938v1_alt:431513-444310	3	+	433635	443222	789624	16	89,93,175,102,111,253,142,204,279,141,286,102,69,130,208,1251,	0,2067,2870,3430,4325,5209,5730,6143,6746,7104,7415,8526,8713,8882,9093,11546,
#Deleted in new
chr19_KI270938v1_alt	431973	435005	chr19_KI270938v1_alt:431973-435005	0	+	433635	435005	789624	4	63,93,175,62,	0,1607,2410,2970,
#Deleted in new
chr19_KI270938v1_alt	434282	435916	chr19_KI270938v1_alt:434282-435916	0	+	434282	434282	8553170	3	276,102,78,	0,661,1556,
#Deleted in new
chr19_KI270938v1_alt	436742	443694	chr19_KI270938v1_alt:436742-443694	0	+	436742	441199	789624	10	233,142,204,279,141,286,102,69,130,3088,	0,501,914,1517,1875,2186,3297,3484,3653,3864,
#Deleted in new
chr19_KI270938v1_alt	440707	444006	chr19_KI270938v1_alt:440707-444006	0	+	440707	443748	789624	2	107,487,	0,2812,
#Deleted in new
chr19_KI270938v1_alt	444089	446008	chr19_KI270938v1_alt:444089-446008	3	-	444383	445889	789624	1	1919,	0,
#Deleted in new
chr19_KI270938v1_alt	447323	455525	chr19_KI270938v1_alt:447323-455525	3	-	447398	447845	789624	3	522,141,201,	0,6556,8001,
#Deleted in new
chr19_KI270938v1_alt	453840	455432	chr19_KI270938v1_alt:453840-455432	0	-	453840	453840	8553170	2	180,108,	0,1484,
#Deleted in new
chr19_KI270938v1_alt	480213	490435	chr19_KI270938v1_alt:480213-490435	0	+	480576	490435	789624	2	379,216,	0,10006,
#Deleted in new
chr19_KI270938v1_alt	480213	490435	chr19_KI270938v1_alt:480213-490435	2	+	480576	490435	789624	3	379,36,216,	0,5816,10006,
#Deleted in new
chr19_KI270938v1_alt	485126	493011	chr19_KI270938v1_alt:485126-493011	1	+	485248	492893	789624	5	156,36,294,51,162,	0,903,5093,6232,7723,
#Deleted in new
chr19_KI270938v1_alt	485236	493011	chr19_KI270938v1_alt:485236-493011	1	+	485248	492893	789624	4	46,36,294,162,	0,793,4983,7613,
#Deleted in new
chr19_KI270938v1_alt	504019	504328	chr19_KI270938v1_alt:504019-504328	7	+	504019	504019	16724991	1	309,	0,
#Deleted in new
chr19_KI270938v1_alt	515022	526138	chr19_KI270938v1_alt:515022-526138	0	+	515022	515022	8553170	8	389,279,62,261,51,123,53,279,	0,1042,2896,4212,5275,9823,10676,10837,
#Deleted in new
chr19_KI270938v1_alt	515022	526138	chr19_KI270938v1_alt:515022-526138	0	+	515128	519287	789624	8	140,36,279,261,51,123,164,279,	0,353,1042,4212,5275,9823,10565,10837,
#Deleted in new
chr19_KI270938v1_alt	515022	526138	chr19_KI270938v1_alt:515022-526138	0	+	515128	519287	789624	8	140,36,279,261,51,123,53,279,	0,353,1042,4212,5275,9823,10676,10837,
#Deleted in new
chr19_KI270938v1_alt	515022	526138	chr19_KI270938v1_alt:515022-526138	0	+	515022	515022	8553170	7	389,279,261,51,123,53,279,	0,1042,4212,5275,9823,10676,10837,
#Deleted in new
chr19_KI270938v1_alt	515022	526138	chr19_KI270938v1_alt:515022-526138	0	+	515128	519287	789624	8	140,36,279,279,51,123,53,279,	0,353,1042,4194,5275,9823,10676,10837,
#Deleted in new
chr19_KI270938v1_alt	515090	527780	chr19_KI270938v1_alt:515090-527780	3	+	515128	525905	789624	8	72,36,279,306,293,51,53,1921,	0,285,974,2828,4112,5207,10608,10769,
#Deleted in new
chr19_KI270938v1_alt	515121	526055	chr19_KI270938v1_alt:515121-526055	0	+	515128	524905	789624	9	41,36,279,306,293,51,123,53,196,	0,254,943,2797,4081,5176,9724,10577,10738,
#Deleted in new
chr19_KI270938v1_alt	517610	527780	chr19_KI270938v1_alt:517610-527780	0	+	517610	517610	8553170	4	614,293,685,2429,	0,1592,2687,7741,
#Deleted in new
chr19_KI270938v1_alt	534366	534653	chr19_KI270938v1_alt:534366-534653	7	+	534366	534366	16724991	1	287,	0,
#Deleted in new
chr19_KI270938v1_alt	555500	557491	chr19_KI270938v1_alt:555500-557491	0	+	555500	555500	8553170	4	516,36,282,180,	0,1156,1381,1811,
#Deleted in new
chr19_KI270938v1_alt	555608	558417	chr19_KI270938v1_alt:555608-558417	2	+	556459	558417	789624	7	408,215,36,282,303,297,30,	0,670,1048,1273,1703,2228,2779,
#Deleted in new
chr19_KI270938v1_alt	555931	570141	chr19_KI270938v1_alt:555931-570141	1	+	556459	569927	0	9	85,82,36,282,303,297,303,51,360,	0,480,725,950,1380,1905,2456,13659,13850,
#Deleted in new
chr19_KI270938v1_alt	556370	570139	chr19_KI270938v1_alt:556370-570139	1	+	556459	569927	0	8	123,36,282,303,297,303,51,358,	0,286,511,941,1466,2017,13220,13411,
#Deleted in new
chr19_KI270938v1_alt	556372	570141	chr19_KI270938v1_alt:556372-570141	1	+	556459	569927	0	7	121,36,282,303,297,303,360,	0,284,509,939,1464,2015,13409,
#Deleted in new
chr19_KI270938v1_alt	556421	569976	chr19_KI270938v1_alt:556421-569976	1	+	556459	569927	789624	6	72,282,303,297,303,195,	0,460,890,1415,1966,13360,
#Deleted in new
chr19_KI270938v1_alt	556459	569976	chr19_KI270938v1_alt:556459-569976	1	+	556459	569927	789624	5	34,36,244,152,195,	0,197,422,2079,13322,
#Deleted in new
chr19_KI270938v1_alt	558652	570128	chr19_KI270938v1_alt:558652-570128	0	+	558652	560263	789624	3	38,259,347,	0,1393,11129,
#Deleted in new
chr19_KI270938v1_alt	572019	572866	chr19_KI270938v1_alt:572019-572866	3	+	572019	572019	8553170	1	847,	0,
#Deleted in new
chr19_KI270938v1_alt	576160	584456	chr19_KI270938v1_alt:576160-584456	0	+	576160	576160	789624	9	200,36,288,303,181,303,51,39,1179,	0,859,1083,1518,2173,2607,5654,6930,7117,
#Deleted in new
chr19_KI270938v1_alt	576160	582299	chr19_KI270938v1_alt:576160-582299	0	+	576160	576160	789624	7	200,36,288,303,297,303,485,	0,859,1083,1518,2057,2607,5654,
#Deleted in new
chr19_KI270938v1_alt	576226	583654	chr19_KI270938v1_alt:576226-583654	1	+	576823	583396	789624	10	134,82,36,288,303,297,303,51,39,377,	0,549,793,1017,1452,1991,2541,5588,6864,7051,
#Deleted in new
chr19_KI270938v1_alt	576228	582295	chr19_KI270938v1_alt:576228-582295	0	+	576228	576228	789624	7	132,280,288,303,297,303,481,	0,547,1015,1450,1989,2539,5586,
#Deleted in new
chr19_KI270938v1_alt	576238	584669	chr19_KI270938v1_alt:576238-584669	3	+	576823	583396	789624	8	122,82,36,288,303,51,39,1392,	0,537,781,1005,1440,5576,6852,7039,
#Deleted in new
chr19_KI270938v1_alt	590449	590956	chr19_KI270938v1_alt:590449-590956	7	+	590449	590449	16724991	2	36,280,	0,227,
#Deleted in new
chr19_KI270938v1_alt	613048	619719	chr19_KI270938v1_alt:613048-619719	1	+	613195	619443	789624	15	150,82,36,288,303,297,303,51,51,123,76,38,53,156,423,	0,542,787,1016,1451,1980,2532,3154,3487,4157,4620,4775,5073,6013,6248,
#Deleted in new
chr19_KI270938v1_alt	613055	620134	chr19_KI270938v1_alt:613055-620134	3	+	613195	619443	789624	15	143,82,36,288,303,297,303,51,48,123,76,38,53,156,838,	0,535,780,1009,1444,1973,2525,3147,3483,4150,4613,4768,5066,6006,6241,
#Deleted in new
chr19_KI270938v1_alt	613076	619742	chr19_KI270938v1_alt:613076-619742	1	+	613195	619443	789624	15	122,82,36,288,303,297,303,51,48,123,76,38,53,159,446,	0,514,759,988,1423,1952,2504,3126,3462,4129,4592,4747,5045,5982,6220,
#Deleted in new
chr19_KI270938v1_alt	613081	620093	chr19_KI270938v1_alt:613081-620093	1	+	613638	619443	789624	14	117,82,36,288,303,297,303,51,123,76,38,53,156,797,	0,509,754,983,1418,1947,2499,3454,4124,4587,4742,5040,5980,6215,
#Deleted in new
chr19_KI270938v1_alt	613583	619755	chr19_KI270938v1_alt:613583-619755	0	+	613583	619443	789624	15	89,36,288,303,297,303,51,51,39,123,76,38,53,159,459,	0,252,481,916,1445,1997,2619,2952,3345,3622,4085,4240,4538,5475,5713,
#Deleted in new
chr19_KI270938v1_alt	613639	619443	chr19_KI270938v1_alt:613639-619443	0	+	613639	619443	789624	14	33,36,288,303,297,303,51,51,123,76,38,53,159,147,	0,196,425,860,1389,1941,2563,2896,3566,4029,4184,4482,5419,5657,
#Deleted in new
chr19_KI270938v1_alt	613639	619584	chr19_KI270938v1_alt:613639-619584	0	+	613639	618133	789624	13	33,36,288,303,297,303,51,48,123,38,53,156,288,	0,196,425,860,1389,1941,2563,2899,3566,4184,4482,5422,5657,
#Deleted in new
chr19_KI270938v1_alt	615690	616748	chr19_KI270938v1_alt:615690-616748	0	+	615690	615690	8553170	3	193,51,213,	0,512,845,
#Deleted in new
chr19_KI270938v1_alt	615707	620093	chr19_KI270938v1_alt:615707-620093	0	+	615707	615707	8553170	8	102,51,51,176,76,38,1096,797,	0,495,828,1445,1961,2116,2414,3589,
#Deleted in new
chr19_KI270938v1_alt	616935	618181	chr19_KI270938v1_alt:616935-618181	0	+	616935	616935	8553170	4	393,76,38,60,	0,733,888,1186,
#Deleted in new
chr19_KI270938v1_alt	617457	618670	chr19_KI270938v1_alt:617457-618670	0	+	617457	617457	8553170	3	287,38,549,	0,366,664,
#Deleted in new
chr19_KI270938v1_alt	618286	621457	chr19_KI270938v1_alt:618286-621457	3	-	618286	618286	8553170	2	355,199,	0,2972,
#Deleted in new
chr19_KI270938v1_alt	645384	650264	chr19_KI270938v1_alt:645384-650264	0	+	646516	650264	789624	10	249,205,300,51,51,117,76,38,53,62,	0,1021,1366,1979,2310,2995,3420,3579,3877,4818,
#Deleted in new
chr19_KI270938v1_alt	645384	652924	chr19_KI270938v1_alt:645384-652924	1	+	645599	650584	0	12	249,36,285,300,51,51,117,76,38,53,159,2487,	0,719,941,1366,1979,2310,2995,3420,3579,3877,4815,5053,
#Deleted in new
chr19_KI270938v1_alt	645384	652924	chr19_KI270938v1_alt:645384-652924	3	+	645476	650584	789624	11	249,285,300,51,51,117,76,38,56,159,2487,	0,941,1366,1979,2310,2995,3420,3579,3874,4815,5053,
#Deleted in new
chr19_KI270938v1_alt	645560	650962	chr19_KI270938v1_alt:645560-650962	1	+	645599	650584	0	12	73,36,285,300,51,51,117,76,38,53,156,525,	0,543,765,1190,1803,2134,2819,3244,3403,3701,4642,4877,
#Deleted in new
chr19_KI270938v1_alt	645563	650962	chr19_KI270938v1_alt:645563-650962	1	+	645599	650584	789624	11	70,36,285,300,51,51,117,76,38,53,525,	0,540,762,1187,1800,2131,2816,3241,3400,3698,4874,
#Deleted in new
chr19_KI270938v1_alt	645585	650962	chr19_KI270938v1_alt:645585-650962	1	+	645599	650584	0	12	48,36,285,300,51,51,117,76,38,56,159,525,	0,518,740,1165,1778,2109,2794,3219,3378,3673,4614,4852,
#Deleted in new
chr19_KI270938v1_alt	645592	650358	chr19_KI270938v1_alt:645592-650358	0	+	645599	650358	789624	11	41,36,285,300,51,48,117,76,38,53,159,	0,511,733,1158,1771,2105,2787,3212,3371,3669,4607,
#Deleted in new
chr19_KI270938v1_alt	648362	649955	chr19_KI270938v1_alt:648362-649955	0	+	648362	648362	8553170	4	134,76,38,697,	0,442,601,896,
#Deleted in new
chr19_KI270938v1_alt	648850	649603	chr19_KI270938v1_alt:648850-649603	0	+	648850	649009	789624	3	30,58,342,	0,113,411,
#Deleted in new
chr19_KI270938v1_alt	653795	655156	chr19_KI270938v1_alt:653795-655156	7	+	653795	653795	16724991	3	50,285,244,	0,572,1117,
#Deleted in new
chr19_KI270938v1_alt	679496	683797	chr19_KI270938v1_alt:679496-683797	7	+	679496	679496	16724991	7	36,285,303,260,303,45,138,	0,176,608,1082,1592,3988,4163,
#Deleted in new
chr19_KI270938v1_alt	686843	687127	chr19_KI270938v1_alt:686843-687127	7	+	686843	686843	16724991	1	284,	0,
#Deleted in new
chr19_KI270938v1_alt	690813	696068	chr19_KI270938v1_alt:690813-696068	7	+	690813	690813	16724991	7	523,285,310,297,303,51,357,	0,686,1120,1639,2189,4699,4898,
#Deleted in new
chr19_KI270938v1_alt	691499	695848	chr19_KI270938v1_alt:691499-695848	5	+	691499	691499	16724991	6	285,310,297,303,51,137,	0,434,953,1503,4013,4212,
#Deleted in new
chr19_KI270938v1_alt	707065	718708	chr19_KI270938v1_alt:707065-718708	3	+	707115	718677	789624	8	84,36,285,300,294,105,53,157,	0,761,1567,3125,5007,10768,11335,11486,
#Deleted in new
chr19_KI270938v1_alt	721087	735618	chr19_KI270938v1_alt:721087-735618	3	+	721124	735085	0	8	71,36,300,294,51,105,53,686,	0,979,3452,5269,8813,13127,13694,13845,
#Deleted in new
chr19_KI270938v1_alt	737588	749937	chr19_KI270938v1_alt:737588-749937	7	+	737588	737588	16724991	8	34,36,299,294,51,105,53,177,	0,1091,3585,5409,8868,11454,12021,12172,
#Deleted in new
chr19_KI270938v1_alt	752379	766701	chr19_KI270938v1_alt:752379-766701	3	+	752416	766379	789624	8	71,36,300,294,51,102,53,499,	0,1035,3519,5351,8798,13108,13672,13823,
#Deleted in new
chr19_KI270938v1_alt	768920	772884	chr19_KI270938v1_alt:768920-772884	7	+	768920	768920	16724991	3	64,297,294,	0,1846,3670,
#Deleted in new
chr19_KI270938v1_alt	786103	797085	chr19_KI270938v1_alt:786103-797085	3	+	786103	796680	789624	8	157,36,285,294,51,104,54,675,	0,356,1258,2416,5298,9590,10154,10307,
#Deleted in new
chr19_KI270938v1_alt	786193	797086	chr19_KI270938v1_alt:786193-797086	1	+	786220	796270	789624	8	67,36,285,294,51,104,53,676,	0,266,1168,2326,5208,9500,10065,10217,
#Deleted in new
chr19_KI270938v1_alt	786208	797082	chr19_KI270938v1_alt:786208-797082	1	+	786220	796680	789624	7	52,36,285,294,51,53,672,	0,251,1153,2311,5193,10050,10202,
#Deleted in new
chr19_KI270938v1_alt	786208	797082	chr19_KI270938v1_alt:786208-797082	1	+	786220	796680	789624	6	52,36,285,294,53,672,	0,251,1153,2311,10050,10202,
#Deleted in new
chr19_KI270938v1_alt	786209	796691	chr19_KI270938v1_alt:786209-796691	1	+	786220	796680	789624	5	51,36,294,53,281,	0,250,2310,10049,10201,
#Deleted in new
chr19_KI270938v1_alt	799042	813347	chr19_KI270938v1_alt:799042-813347	3	+	799069	812844	0	9	61,36,285,300,294,51,105,53,680,	0,1060,1841,3239,5091,8554,12887,13454,13625,
#Deleted in new
chr19_KI270938v1_alt	815244	830852	chr19_KI270938v1_alt:815244-830852	3	+	815333	830511	789624	8	123,36,300,272,51,105,53,382,	0,2403,4900,6752,10192,14508,15075,15226,
#Deleted in new
chr19_KI270938v1_alt	833011	849784	chr19_KI270938v1_alt:833011-849784	3	+	833044	849300	789624	8	67,36,285,300,294,105,53,694,	0,777,1555,3304,5176,15362,15927,16079,
#Deleted in new
chr19_KI270938v1_alt	833044	849529	chr19_KI270938v1_alt:833044-849529	1	+	833044	849300	789624	9	34,36,285,300,294,51,105,53,439,	0,744,1522,3271,5143,8603,15329,15894,16046,
#Deleted in new
chr19_KI270938v1_alt	851507	851614	chr19_KI270938v1_alt:851507-851614	3	-	851507	851507	8553170	1	107,	0,
#Deleted in new
chr19_KI270938v1_alt	856817	872370	chr19_KI270938v1_alt:856817-872370	1	+	856859	872343	0	3	76,291,242,	0,10943,15311,
#Deleted in new
chr19_KI270938v1_alt	856849	871548	chr19_KI270938v1_alt:856849-871548	1	+	856859	870846	0	4	44,36,291,1061,	0,1050,10911,13638,
#Deleted in new
chr19_KI270938v1_alt	856849	873900	chr19_KI270938v1_alt:856849-873900	1	+	856859	872343	0	5	44,36,291,288,1772,	0,1050,10911,13638,15279,
#Deleted in new
chr19_KI270938v1_alt	856849	872343	chr19_KI270938v1_alt:856849-872343	0	+	856849	856849	8553170	4	44,78,291,215,	0,6556,10911,15279,
#Deleted in new
chr19_KI270938v1_alt	856849	871548	chr19_KI270938v1_alt:856849-871548	0	+	856859	870846	0	4	44,291,636,92,	0,10911,13638,14607,
#Deleted in new
chr19_KI270938v1_alt	856854	872370	chr19_KI270938v1_alt:856854-872370	1	+	856859	872343	0	4	39,36,291,242,	0,1045,10906,15274,
#Deleted in new
chr19_KI270938v1_alt	856854	872370	chr19_KI270938v1_alt:856854-872370	1	+	856859	872343	0	5	39,36,291,222,242,	0,1045,10906,13633,15274,
#Deleted in new
chr19_KI270938v1_alt	856859	872343	chr19_KI270938v1_alt:856859-872343	0	+	856859	856859	8553170	5	34,36,78,291,215,	0,1040,6546,10901,15269,
#Deleted in new
chr19_KI270938v1_alt	856859	872343	chr19_KI270938v1_alt:856859-872343	1	+	856859	872343	0	4	34,291,222,215,	0,10901,13628,15269,
#Deleted in new
chr19_KI270938v1_alt	856859	872343	chr19_KI270938v1_alt:856859-872343	1	+	856859	872343	0	4	34,291,288,215,	0,10901,13628,15269,
#Deleted in new
chr19_KI270938v1_alt	856859	872343	chr19_KI270938v1_alt:856859-872343	0	+	856859	856859	8553170	6	34,36,78,291,222,215,	0,1040,6546,10901,13628,15269,
#Deleted in new
chr19_KI270938v1_alt	856859	872343	chr19_KI270938v1_alt:856859-872343	3	+	856859	872343	0	3	34,288,215,	0,13628,15269,
#Deleted in new
chr19_KI270938v1_alt	856859	872343	chr19_KI270938v1_alt:856859-872343	1	+	856859	872219	0	4	34,291,214,215,	0,10901,13628,15269,
#Deleted in new
chr19_KI270938v1_alt	888621	895555	chr19_KI270938v1_alt:888621-895555	1	+	888659	895353	0	7	72,36,285,279,48,51,384,	0,149,373,3096,3870,6028,6550,
#Deleted in new
chr19_KI270938v1_alt	888626	891820	chr19_KI270938v1_alt:888626-891820	0	+	888626	888626	8553170	3	180,285,103,	0,368,3091,
#Deleted in new
chr19_KI270938v1_alt	888626	889250	chr19_KI270938v1_alt:888626-889250	0	+	888626	888626	8553170	2	67,480,	0,144,
#Deleted in new
chr19_KI270938v1_alt	888627	895441	chr19_KI270938v1_alt:888627-895441	1	+	888659	895353	789624	6	66,285,279,48,48,270,	0,367,3090,3864,6025,6544,
#Deleted in new
chr19_KI270938v1_alt	888634	898622	chr19_KI270938v1_alt:888634-898622	1	+	888659	895353	0	8	59,36,285,279,48,48,466,391,	0,136,360,3083,3857,6018,6537,9597,
#Deleted in new
chr19_KI270938v1_alt	888652	895455	chr19_KI270938v1_alt:888652-895455	3	+	888659	895353	0	6	41,36,285,279,48,284,	0,118,342,3065,3839,6519,
#Deleted in new
chr19_KI270938v1_alt	888652	895455	chr19_KI270938v1_alt:888652-895455	1	+	888659	895353	0	6	41,36,279,48,51,284,	0,118,3065,3839,5997,6519,
#Deleted in new
chr19_KI270938v1_alt	888659	895353	chr19_KI270938v1_alt:888659-895353	1	+	888659	895353	0	5	34,279,48,51,182,	0,3058,3832,5990,6512,
#Deleted in new
chr19_KI270938v1_alt	905990	929987	chr19_KI270938v1_alt:905990-929987	1	-	906221	924193	0	10	364,168,171,171,171,198,1579,75,316,37,	0,6990,10060,10980,12752,14535,15379,17422,17926,23960,
#Deleted in new
chr19_KI270938v1_alt	905991	924232	chr19_KI270938v1_alt:905991-924232	1	-	906221	924193	0	10	363,171,168,171,171,171,114,1579,75,316,	0,4095,6989,10059,10979,12751,14534,15378,17421,17925,
#Deleted in new
chr19_KI270938v1_alt	905996	924234	chr19_KI270938v1_alt:905996-924234	1	-	906221	924193	0	9	358,168,171,171,171,198,1579,75,318,	0,6984,10054,10974,12746,14529,15373,17416,17920,
#Deleted in new
chr19_KI270938v1_alt	905996	948725	chr19_KI270938v1_alt:905996-948725	3	-	906221	924193	0	13	358,171,168,171,171,171,198,1579,75,316,37,207,204,	0,4090,6984,10054,10974,12746,14529,15373,17416,17920,23954,24128,42525,
#Deleted in new
chr19_KI270938v1_alt	906133	929979	chr19_KI270938v1_alt:906133-929979	0	-	910138	924193	789624	11	221,134,168,171,171,171,198,1579,75,316,29,	0,3953,6847,9917,10837,12609,14392,15236,17279,17783,23817,
#Deleted in new
chr19_KI270938v1_alt	906134	929979	chr19_KI270938v1_alt:906134-929979	1	-	906221	924193	0	11	220,171,168,171,171,171,198,1579,75,316,29,	0,3952,6846,9916,10836,12608,14391,15235,17278,17782,23816,
#Deleted in new
chr19_KI270938v1_alt	923474	948735	chr19_KI270938v1_alt:923474-948735	0	-	923474	924193	789624	3	13,316,214,	0,442,25047,
#Deleted in new
chr19_KI270938v1_alt	923983	948794	chr19_KI270938v1_alt:923983-948794	0	-	923983	924193	789624	3	249,37,273,	0,5967,24538,
#Deleted in new
chr19_KI270938v1_alt	924032	948725	chr19_KI270938v1_alt:924032-948725	0	-	924032	924193	789624	4	200,37,127,204,	0,5918,6081,24489,
#Deleted in new
chr19_KI270938v1_alt	935611	964121	chr19_KI270938v1_alt:935611-964121	0	+	952497	964121	789624	5	156,297,45,72,23,	0,16869,21370,24622,28487,
#Deleted in new
chr19_KI270938v1_alt	935649	960281	chr19_KI270938v1_alt:935649-960281	0	+	952497	960281	789624	4	202,297,45,48,	0,16831,21332,24584,
#Deleted in new
chr19_KI270938v1_alt	947551	964164	chr19_KI270938v1_alt:947551-964164	0	+	952497	964164	789624	5	60,297,45,72,66,	0,4929,9430,12682,16547,
#Deleted in new
chr19_KI270938v1_alt	947733	983624	chr19_KI270938v1_alt:947733-983624	1	+	952497	983380	789624	13	126,297,45,72,66,1567,171,165,171,171,171,171,383,	0,4747,9248,12500,16365,16910,19795,20899,24770,25250,29017,32065,35508,
#Deleted in new
chr19_KI270938v1_alt	947766	983624	chr19_KI270938v1_alt:947766-983624	0	+	947766	947766	789624	13	93,297,45,72,66,1567,171,165,372,171,171,171,383,	0,4714,9215,12467,16332,16877,19762,20866,24737,25217,28984,32032,35475,
#Deleted in new
chr19_KI270938v1_alt	947810	983617	chr19_KI270938v1_alt:947810-983617	1	+	952497	983380	789624	12	49,297,45,66,1567,171,165,171,171,171,171,376,	0,4670,9171,16288,16833,19718,20822,24693,25173,28940,31988,35431,
#Deleted in new
chr19_KI270938v1_alt	947817	983620	chr19_KI270938v1_alt:947817-983620	1	+	952497	983380	789624	12	42,297,45,72,1567,171,165,171,171,171,171,379,	0,4663,9164,12416,16826,19711,20815,24686,25166,28933,31981,35424,
#Deleted in new
chr19_KI270938v1_alt	947825	964128	chr19_KI270938v1_alt:947825-964128	0	+	952497	959346	789624	6	34,297,45,99,72,30,	0,4655,9156,11516,12408,16273,
#Deleted in new
chr19_KI270938v1_alt	948824	983622	chr19_KI270938v1_alt:948824-983622	3	+	952497	983380	789624	13	125,297,45,72,66,1567,171,165,171,171,171,171,381,	0,3656,8157,11409,15274,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_KI270938v1_alt	948824	983622	chr19_KI270938v1_alt:948824-983622	1	+	952497	983380	789624	12	125,297,45,72,1567,171,165,171,171,171,171,381,	0,3656,8157,11409,15819,18704,19808,23679,24159,27926,30974,34417,
#Deleted in new
chr19_KI270938v1_alt	948855	964793	chr19_KI270938v1_alt:948855-964793	0	+	952704	964793	789624	6	98,145,45,72,66,150,	0,3777,8126,11378,15243,15788,
#Deleted in new
chr19_KI270938v1_alt	948855	983560	chr19_KI270938v1_alt:948855-983560	1	+	952497	983380	789624	14	94,155,73,45,72,66,1567,171,165,171,171,171,171,319,	0,3625,3849,8126,11378,15243,15788,18673,19777,23648,24128,27895,30943,34386,
#Deleted in new
chr19_KI270938v1_alt	948887	983617	chr19_KI270938v1_alt:948887-983617	1	+	952497	983380	789624	13	62,297,45,72,57,1567,171,165,171,171,171,171,376,	0,3593,8094,11346,15220,15756,18641,19745,23616,24096,27863,30911,34354,
#Deleted in new
chr19_KI270938v1_alt	956475	964879	chr19_KI270938v1_alt:956475-964879	0	+	956530	964879	789624	5	131,45,72,66,236,	0,506,3758,7623,8168,
#Deleted in new
chr19_KI270938v1_alt	965967	968883	chr19_KI270938v1_alt:965967-968883	0	+	965967	968810	789624	3	243,171,251,	0,1561,2665,
#Deleted in new
chr19_KI270938v1_alt	968687	976922	chr19_KI270938v1_alt:968687-976922	0	+	968687	972778	789624	5	110,75,179,171,172,	0,3816,4009,4296,8063,
#Deleted in new
chr19_KI270938v1_alt	968773	972688	chr19_KI270938v1_alt:968773-972688	0	+	968773	972042	789624	3	24,196,185,	0,3265,3730,
#Deleted in new
chr19_KI270938v1_alt	973107	974031	chr19_KI270938v1_alt:973107-974031	0	+	973107	973107	8553170	2	540,50,	0,874,
#Deleted in new
chr19_KI270938v1_alt	975699	983620	chr19_KI270938v1_alt:975699-983620	0	+	975699	975699	8553170	3	1222,171,379,	0,4099,7542,
#Deleted in new
chr19_KI270938v1_alt	996186	1020746	chr19_KI270938v1_alt:996186-1020746	1	-	997402	1020718	0	7	1461,51,60,285,258,33,62,	0,1978,4947,13873,18434,18801,24498,
#Deleted in new
chr19_KI270938v1_alt	996186	1020746	chr19_KI270938v1_alt:996186-1020746	1	-	997402	1020718	0	8	1461,51,60,54,285,258,33,62,	0,1978,4947,11513,13873,18434,18801,24498,
#Deleted in new
chr19_KI270938v1_alt	996186	1020746	chr19_KI270938v1_alt:996186-1020746	3	-	996563	1020718	0	8	1461,55,60,54,285,258,33,62,	0,1974,4947,11513,13873,18434,18801,24498,
#Deleted in new
chr19_KI270938v1_alt	997007	1001301	chr19_KI270938v1_alt:997007-1001301	0	-	997007	997007	8553170	3	640,51,168,	0,1157,4126,
#Deleted in new
chr19_KI270938v1_alt	1010074	1036410	chr19_KI270938v1_alt:1010074-1036410	3	-	1010074	1010074	8553170	6	270,405,102,213,105,176,	0,17312,19794,20736,21066,26160,
#Deleted in new
chr19_KI270938v1_alt	1010086	1015347	chr19_KI270938v1_alt:1010086-1015347	0	-	1010086	1014714	789624	3	258,258,360,	0,4534,4901,
#Deleted in new
chr19_KI270938v1_alt	1021589	1025589	chr19_KI270938v1_alt:1021589-1025589	0	-	1021589	1021589	8553170	2	157,2654,	0,1346,
#Deleted in new
chr19_KI270938v1_alt	1021592	1024371	chr19_KI270938v1_alt:1021592-1024371	0	-	1021592	1021592	8553170	3	615,712,644,	0,1202,2135,
#Deleted in new
chr19_KI270938v1_alt	1021592	1045558	chr19_KI270938v1_alt:1021592-1045558	0	-	1039247	1045514	789624	4	327,759,133,109,	0,2135,17565,23857,
#Deleted in new
chr19_KI270938v1_alt	1024520	1027431	chr19_KI270938v1_alt:1024520-1027431	0	-	1024520	1024520	8553170	2	98,45,	0,2866,
#Deleted in new
chr19_KI270938v1_alt	1026824	1045658	chr19_KI270938v1_alt:1026824-1045658	1	-	1027555	1045514	789624	7	967,102,213,105,156,119,209,	0,3044,3986,4316,12310,14814,18625,
#Deleted in new
chr19_KI270938v1_alt	1026824	1052011	chr19_KI270938v1_alt:1026824-1052011	1	-	1027555	1039261	789624	8	967,102,213,105,156,119,117,208,	0,3044,3986,4316,12310,14814,19953,24979,
#Deleted in new
chr19_KI270938v1_alt	1026824	1046315	chr19_KI270938v1_alt:1026824-1046315	0	-	1030734	1045514	789624	8	967,384,212,213,105,156,119,866,	0,2762,3703,3986,4316,12310,14814,18625,
#Deleted in new
chr19_KI270938v1_alt	1027336	1045568	chr19_KI270938v1_alt:1027336-1045568	0	-	1030734	1045514	789624	8	455,102,212,213,105,156,119,119,	0,2532,3191,3474,3804,11798,14302,18113,
#Deleted in new
chr19_KI270938v1_alt	1029894	1045630	chr19_KI270938v1_alt:1029894-1045630	0	-	1039247	1045514	789624	5	76,213,105,156,181,	0,916,1246,9240,15555,
#Deleted in new
chr19_KI270938v1_alt	1031138	1041656	chr19_KI270938v1_alt:1031138-1041656	0	-	1031138	1031138	8553170	4	107,303,156,18,	0,2043,7996,10500,
#Deleted in new
chr19_KI270938v1_alt	1033355	1045601	chr19_KI270938v1_alt:1033355-1045601	2	-	1033355	1033355	8553170	4	129,156,119,152,	0,5779,8283,12094,
#Deleted in new
chr19_KI270938v1_alt	1039134	1052011	chr19_KI270938v1_alt:1039134-1052011	0	-	1039134	1039261	789624	4	156,119,118,208,	0,2504,11760,12669,
#Deleted in new
chr19_KI270938v1_alt	1041734	1052022	chr19_KI270938v1_alt:1041734-1052022	0	-	1041734	1045514	789624	4	23,250,118,219,	0,3715,9160,10069,
#Deleted in new
chr19_KI270938v1_alt	1045522	1046850	chr19_KI270938v1_alt:1045522-1046850	0	-	1045522	1045522	8553170	2	331,73,	0,1255,
#Deleted in new
chr19_KI270938v1_alt	1045701	1052022	chr19_KI270938v1_alt:1045701-1052022	0	-	1045701	1045701	8553170	4	152,47,70,173,	0,1076,5539,6148,
#Deleted in new
chr19_KI270938v1_alt	1045752	1052002	chr19_KI270938v1_alt:1045752-1052002	0	-	1045752	1045752	8553170	4	101,136,117,199,	0,593,1025,6051,
#Deleted in new
chr19_KI270938v1_alt	1045989	1052005	chr19_KI270938v1_alt:1045989-1052005	0	-	1045989	1045989	8553170	3	492,98,202,	0,788,5814,
#Deleted in new
chr19_KI270938v1_alt	1046233	1051973	chr19_KI270938v1_alt:1046233-1051973	0	-	1046233	1046233	8553170	3	248,117,170,	0,544,5570,
#Deleted in new
chr19_KI270938v1_alt	1046382	1052013	chr19_KI270938v1_alt:1046382-1052013	0	-	1046382	1046382	8553170	2	512,210,	0,5421,
#Deleted in new
chr19_KI270938v1_alt	1046429	1053773	chr19_KI270938v1_alt:1046429-1053773	0	-	1046429	1046429	8553170	2	465,129,	0,7215,
#Deleted in new
chr19_KI270938v1_alt	1046521	1052374	chr19_KI270938v1_alt:1046521-1052374	0	-	1046521	1046521	8553170	2	373,199,	0,5654,
#Deleted in new
chr19_KI270938v1_alt	1049676	1051984	chr19_KI270938v1_alt:1049676-1051984	0	-	1049676	1049676	8553170	2	521,181,	0,2127,
#Deleted in new
chr19_KN196484v1_fix	36470	46011	chr19_KN196484v1_fix:36470-46011	3	+	44485	46011	789624	3	81,152,438,	0,7932,9103,
#Deleted in new
chr19_KN196484v1_fix	38758	46043	chr19_KN196484v1_fix:38758-46043	1	+	38796	46011	8553170	3	45,152,470,	0,5644,6815,
#Deleted in new
chr19_KN196484v1_fix	72847	73431	chr19_KN196484v1_fix:72847-73431	3	-	72847	72847	8553170	1	584,	0,
#Deleted in new
chr19_KN196484v1_fix	85225	94077	chr19_KN196484v1_fix:85225-94077	3	-	85590	91743	789624	11	737,107,316,141,147,287,148,189,120,164,179,	0,830,1322,1935,2160,2947,4530,5025,5314,6455,8673,
#Deleted in new
chr19_KN196484v1_fix	85225	93510	chr19_KN196484v1_fix:85225-93510	1	-	85590	91743	789624	11	737,107,316,141,147,287,148,189,120,164,368,	0,830,1322,1935,2160,2947,4530,5025,5314,6455,7917,
#Deleted in new
chr19_KN196484v1_fix	85228	94077	chr19_KN196484v1_fix:85228-94077	1	-	85590	91743	789624	12	734,107,196,36,141,147,287,148,189,120,164,179,	0,827,1319,1599,1932,2157,2944,4527,5022,5311,6452,8670,
#Deleted in new
chr19_KN196484v1_fix	85590	91743	chr19_KN196484v1_fix:85590-91743	1	-	85590	91743	789624	11	372,107,196,36,141,147,287,148,189,120,63,	0,465,957,1237,1570,1795,2582,4165,4660,4949,6090,
#Deleted in new
chr19_KN196484v1_fix	85590	94034	chr19_KN196484v1_fix:85590-94034	1	-	85590	91743	789624	11	372,107,196,141,147,287,148,189,120,164,136,	0,465,957,1570,1795,2582,4165,4660,4949,6090,8308,
#Deleted in new
chr19_KN196484v1_fix	88277	90019	chr19_KN196484v1_fix:88277-90019	0	-	88277	88277	8553170	2	182,264,	0,1478,
#Deleted in new
chr19_KN196484v1_fix	89591	89678	chr19_KN196484v1_fix:89591-89678	3	-	89591	89591	5263520	1	87,	0,
#Deleted in new
chr19_KN196484v1_fix	89757	93514	chr19_KN196484v1_fix:89757-93514	0	-	89757	91743	789624	5	146,189,120,164,38,	0,493,782,1923,3719,
#Deleted in new
chr19_KN196484v1_fix	90081	94028	chr19_KN196484v1_fix:90081-94028	1	-	90208	91743	789624	4	358,120,164,130,	0,458,1599,3817,
#Deleted in new
chr19_KN196484v1_fix	94333	106290	chr19_KN196484v1_fix:94333-106290	3	-	94413	106176	0	9	105,146,113,133,171,95,102,171,124,	0,210,2098,3253,4577,5775,5956,6159,11833,
#Deleted in new
chr19_KN196484v1_fix	94333	100317	chr19_KN196484v1_fix:94333-100317	0	-	94539	100317	789624	6	356,113,133,171,95,28,	0,2098,3253,4577,5775,5956,
#Deleted in new
chr19_KN196484v1_fix	94335	97967	chr19_KN196484v1_fix:94335-97967	0	-	94335	94335	8553170	5	103,146,113,133,133,	0,208,2096,3251,3499,
#Deleted in new
chr19_KN196484v1_fix	94378	106246	chr19_KN196484v1_fix:94378-106246	0	-	99070	106176	789624	7	60,146,113,133,171,102,80,	0,165,2053,3208,4532,5911,11788,
#Deleted in new
chr19_KN196484v1_fix	94566	100598	chr19_KN196484v1_fix:94566-100598	0	-	94566	100598	789624	7	123,113,133,171,95,48,49,	0,1865,3020,4344,5542,5723,5983,
#Deleted in new
chr19_KN196484v1_fix	94592	106233	chr19_KN196484v1_fix:94592-106233	0	-	94592	106176	789624	8	97,113,133,171,95,96,105,67,	0,1839,2994,4318,5516,5697,5966,11574,
#Deleted in new
chr19_KN196484v1_fix	96431	106218	chr19_KN196484v1_fix:96431-106218	0	-	96431	106176	789624	7	113,133,171,95,96,66,52,	0,1155,2479,3677,3858,4166,9735,
#Deleted in new
chr19_KN196484v1_fix	97695	106223	chr19_KN196484v1_fix:97695-106223	0	-	97695	106176	789624	7	24,171,95,102,66,66,57,	0,1215,2413,2594,2797,2902,8471,
#Deleted in new
chr19_KN196484v1_fix	98135	106252	chr19_KN196484v1_fix:98135-106252	0	-	98135	98135	8553170	5	946,95,102,171,86,	0,1973,2154,2357,8031,
#Deleted in new
chr19_KN196484v1_fix	98910	106233	chr19_KN196484v1_fix:98910-106233	0	-	98910	106176	789624	5	171,95,102,168,67,	0,1198,1379,1585,7256,
#Deleted in new
chr19_KN196484v1_fix	98949	106205	chr19_KN196484v1_fix:98949-106205	0	-	98949	106176	789624	5	132,95,102,132,39,	0,1159,1340,1582,7217,
#Deleted in new
chr19_KN196484v1_fix	123199	209769	chr19_KN196484v1_fix:123199-209769	1	-	123362	209761	789624	36	173,272,384,200,574,572,544,617,574,338,142,200,595,593,544,617,574,338,142,200,595,593,544,617,574,338,142,200,595,593,568,605,571,350,1248,63,	0,297,3413,6892,8754,9900,12064,13334,14339,16231,19981,22349,22667,26155,28319,29587,30598,32482,35688,38034,38352,41840,44003,45275,46286,48170,51955,53972,54290,57674,65633,67128,70015,76326,79002,86507,
#Deleted in new
chr19_KN196484v1_fix	123199	209769	chr19_KN196484v1_fix:123199-209769	3	-	123362	209761	789624	36	173,272,384,200,574,572,544,617,574,338,142,200,595,593,544,617,574,338,142,200,595,593,544,617,574,338,142,200,595,593,568,605,571,350,1248,63,	0,297,3413,6892,8754,9900,12064,13334,14339,16231,19981,22349,22667,26155,28319,29587,30598,32482,35688,38034,38352,41840,44003,45275,46286,48170,51955,53972,54290,57674,65633,67128,70015,76326,79002,86507,
#Deleted in new
chr19_KN196484v1_fix	218381	218823	chr19_KN196484v1_fix:218381-218823	7	-	218381	218381	16724991	1	442,	0,
#Deleted in new
chr19_KN196484v1_fix	246147	256584	chr19_KN196484v1_fix:246147-256584	3	+	246345	256448	0	11	234,99,187,147,110,94,168,77,169,56,250,	0,1141,1364,3289,3519,3730,8812,9065,9281,9657,10187,
#Deleted in new
chr19_KN196484v1_fix	246312	256551	chr19_KN196484v1_fix:246312-256551	0	+	246312	246312	8553170	10	69,99,187,147,110,94,168,385,56,217,	0,976,1199,3124,3354,3565,8647,8900,9492,10022,
#Deleted in new
chr19_KN196484v1_fix	246312	256584	chr19_KN196484v1_fix:246312-256584	1	+	246345	256448	0	11	69,99,94,147,110,94,168,77,169,56,250,	0,976,1292,3124,3354,3565,8647,8900,9116,9492,10022,
#Deleted in new
chr19_KN196484v1_fix	246322	256584	chr19_KN196484v1_fix:246322-256584	0	+	246322	246322	8553170	10	59,99,187,147,110,94,168,77,432,250,	0,966,1189,3114,3344,3555,8637,8890,9106,10012,
#Deleted in new
chr19_KN196484v1_fix	246334	255204	chr19_KN196484v1_fix:246334-255204	0	+	246334	246334	8553170	7	47,99,187,147,110,94,245,	0,954,1177,3102,3332,3543,8625,
#Deleted in new
chr19_KN196484v1_fix	254586	255321	chr19_KN196484v1_fix:254586-255321	0	+	254586	254586	8553170	2	541,109,	0,626,
#Deleted in new
chr19_KN196484v1_fix	259276	273446	chr19_KN196484v1_fix:259276-273446	0	+	259276	259276	8553170	5	138,162,178,55,56,	0,9276,10680,13727,14114,
#Deleted in new
chr19_KN196484v1_fix	272178	291952	chr19_KN196484v1_fix:272178-291952	1	+	273469	291608	789624	5	122,55,85,70,382,	0,825,1212,2565,19392,
#Deleted in new
chr19_KN196484v1_fix	272178	288946	chr19_KN196484v1_fix:272178-288946	0	+	281268	288946	789624	6	122,55,87,127,96,139,	0,825,9060,10238,11434,16629,
#Deleted in new
chr19_KN196484v1_fix	272180	274973	chr19_KN196484v1_fix:272180-274973	0	+	272180	272180	8553170	4	120,55,85,230,	0,823,1210,2563,
#Deleted in new
chr19_KN196484v1_fix	272202	286491	chr19_KN196484v1_fix:272202-286491	0	+	281268	286491	789624	6	98,55,87,127,96,98,	0,801,9036,10214,11410,14191,
#Deleted in new
chr19_KN196484v1_fix	272205	291688	chr19_KN196484v1_fix:272205-291688	1	+	273469	290924	789624	7	95,55,85,87,127,96,2881,	0,798,1185,9033,10211,11407,16602,
#Deleted in new
chr19_KN196484v1_fix	272218	296184	chr19_KN196484v1_fix:272218-296184	3	+	273469	290924	789624	7	82,55,163,87,127,96,7377,	0,785,1172,9020,10198,11394,16589,
#Deleted in new
chr19_KN196484v1_fix	272262	273693	chr19_KN196484v1_fix:272262-273693	0	+	272262	272262	8553170	3	38,55,303,	0,741,1128,
#Deleted in new
chr19_KN196484v1_fix	272378	283688	chr19_KN196484v1_fix:272378-283688	0	+	273469	283688	789624	6	34,55,163,87,127,76,	0,625,1012,8860,10038,11234,
#Deleted in new
chr19_KN196484v1_fix	298526	300645	chr19_KN196484v1_fix:298526-300645	7	-	298526	298526	16724991	2	1411,628,	0,1491,
#Deleted in new
chr19_KN196484v1_fix	303402	331352	chr19_KN196484v1_fix:303402-331352	3	-	309499	325475	789624	5	8367,96,127,54,21,	0,19115,20410,22064,27929,
#Deleted in new
chr19_KN196484v1_fix	303402	331351	chr19_KN196484v1_fix:303402-331351	1	-	309499	325475	789624	5	8367,96,127,54,20,	0,19115,20410,22064,27929,
#Deleted in new
chr19_KN196484v1_fix	308721	331348	chr19_KN196484v1_fix:308721-331348	1	-	309499	311557	789624	6	3048,65,127,139,54,105,	0,13827,15091,15339,16745,22522,
#Deleted in new
chr19_KN196484v1_fix	311673	331351	chr19_KN196484v1_fix:311673-331351	0	-	311673	325475	789624	5	96,96,127,54,20,	0,10844,12139,13793,19658,
#Deleted in new
chr19_KN196484v1_fix	311673	331299	chr19_KN196484v1_fix:311673-331299	1	-	311709	325475	789624	5	96,68,127,54,56,	0,10875,12139,13793,19570,
#Deleted in new
chr19_KN196484v1_fix	322423	331249	chr19_KN196484v1_fix:322423-331249	0	-	322423	322423	8553170	4	190,127,54,73,	0,1389,3043,8753,
#Deleted in new
chr19_KN196484v1_fix	322521	331318	chr19_KN196484v1_fix:322521-331318	0	-	322521	325475	789624	5	92,127,54,161,75,	0,1291,2945,8037,8722,
#Deleted in new
chr19_KN196484v1_fix	323899	366068	chr19_KN196484v1_fix:323899-366068	3	-	323899	323899	8553170	7	40,54,96,127,54,70,20,	0,1567,33062,34354,35988,41409,42149,
#Deleted in new
chr19_KN196484v1_fix	344294	366031	chr19_KN196484v1_fix:344294-366031	3	-	349658	358287	789624	6	7058,96,127,54,70,95,	0,12667,13959,15593,21014,21642,
#Deleted in new
chr19_KN196484v1_fix	346148	366081	chr19_KN196484v1_fix:346148-366081	1	-	347999	364405	789624	9	1644,143,74,96,127,54,155,70,33,	0,1831,5130,10813,12105,13739,18254,19160,19900,
#Deleted in new
chr19_KN196484v1_fix	348135	366046	chr19_KN196484v1_fix:348135-366046	1	-	349658	359896	789624	6	3217,96,127,54,70,110,	0,8826,10118,11752,17173,17801,
#Deleted in new
chr19_KN196484v1_fix	348135	366081	chr19_KN196484v1_fix:348135-366081	1	-	349658	359896	789624	6	3217,99,127,54,70,33,	0,8826,10118,11752,17173,17913,
#Deleted in new
chr19_KN196484v1_fix	348322	366031	chr19_KN196484v1_fix:348322-366031	1	-	349658	359896	789624	6	3030,96,127,54,70,95,	0,8639,9931,11565,16986,17614,
#Deleted in new
chr19_KN196484v1_fix	349658	365378	chr19_KN196484v1_fix:349658-365378	1	-	349658	359896	789624	5	1694,99,127,54,70,	0,7303,8595,10229,15650,
#Deleted in new
chr19_KN196484v1_fix	351116	366081	chr19_KN196484v1_fix:351116-366081	0	-	351116	359896	789624	5	236,96,127,54,33,	0,5845,7137,8771,14932,
#Deleted in new
chr19_KN196484v1_fix	351256	365600	chr19_KN196484v1_fix:351256-365600	0	-	351256	359896	789624	5	96,96,127,54,292,	0,5705,6997,8631,14052,
#Deleted in new
chr19_KN196484v1_fix	351256	365378	chr19_KN196484v1_fix:351256-365378	0	-	351256	359896	789624	5	96,99,127,54,70,	0,5705,6997,8631,14052,
#Deleted in new
chr19_KN196484v1_fix	351265	366081	chr19_KN196484v1_fix:351265-366081	0	-	351265	359896	789624	6	87,96,127,54,70,33,	0,5696,6988,8622,14043,14783,
#Deleted in new
chr19_KN196484v1_fix	351312	366003	chr19_KN196484v1_fix:351312-366003	0	-	351312	359896	789624	6	40,96,127,54,70,111,	0,5649,6941,8575,13996,14580,
#Deleted in new
chr19_KN196484v1_fix	365896	369549	chr19_KN196484v1_fix:365896-369549	3	+	365896	365896	8553170	1	3653,	0,
#Deleted in new
chr19_KQ458386v1_fix	5981	11330	chr19_KQ458386v1_fix:5981-11330	3	+	5981	5981	789624	3	91,143,282,	0,907,5067,
#Deleted in new
chr19_KQ458386v1_fix	28717	46591	chr19_KQ458386v1_fix:28717-46591	3	+	28904	46556	8553170	7	246,121,75,67,78,126,67,	0,4995,6946,13348,13519,15911,17807,
#Deleted in new
chr19_KQ458386v1_fix	28730	46589	chr19_KQ458386v1_fix:28730-46589	1	+	33815	46556	789624	8	129,99,121,75,67,78,126,65,	0,1242,4982,6933,13335,13506,15898,17794,
#Deleted in new
chr19_KQ458386v1_fix	28732	46591	chr19_KQ458386v1_fix:28732-46591	1	+	28904	46556	0	8	231,99,121,75,67,78,126,67,	0,1240,4980,6931,13333,13504,15896,17792,
#Deleted in new
chr19_KQ458386v1_fix	28821	35968	chr19_KQ458386v1_fix:28821-35968	0	+	28821	28821	8553170	4	142,99,121,305,	0,1151,4891,6842,
#Deleted in new
chr19_KQ458386v1_fix	28821	45121	chr19_KQ458386v1_fix:28821-45121	1	+	33815	44765	8553170	6	132,121,75,67,78,493,	0,4891,6842,13244,13415,15807,
#Deleted in new
chr19_KQ458386v1_fix	28821	46588	chr19_KQ458386v1_fix:28821-46588	1	+	28904	46584	8553170	5	142,99,121,75,64,	0,1151,4891,6842,17703,
#Deleted in new
chr19_KQ458386v1_fix	28821	40604	chr19_KQ458386v1_fix:28821-40604	0	+	28821	28821	8553170	5	142,99,121,75,267,	0,1151,4891,6842,11516,
#Deleted in new
chr19_KQ458386v1_fix	28828	45380	chr19_KQ458386v1_fix:28828-45380	1	+	28904	44765	0	7	135,99,121,75,67,78,752,	0,1144,4884,6835,13237,13408,15800,
#Deleted in new
chr19_KQ458386v1_fix	28831	44738	chr19_KQ458386v1_fix:28831-44738	0	+	28904	44738	8553170	6	132,121,75,67,78,110,	0,4881,6832,13234,13405,15797,
#Deleted in new
chr19_KQ458386v1_fix	28831	38204	chr19_KQ458386v1_fix:28831-38204	0	+	28831	28831	8553170	5	132,99,121,75,66,	0,1141,4881,6832,9307,
#Deleted in new
chr19_KQ458386v1_fix	28831	35828	chr19_KQ458386v1_fix:28831-35828	0	+	28831	28831	8553170	4	122,99,121,165,	0,1141,4881,6832,
#Deleted in new
chr19_KQ458386v1_fix	28846	46589	chr19_KQ458386v1_fix:28846-46589	1	+	28904	46556	789624	7	117,99,121,75,67,126,65,	0,1126,4866,6817,13219,15782,17678,
#Deleted in new
chr19_KQ458386v1_fix	35685	42536	chr19_KQ458386v1_fix:35685-42536	0	+	35685	35685	8553170	2	53,471,	0,6380,
#Deleted in new
chr19_KQ458386v1_fix	41661	46560	chr19_KQ458386v1_fix:41661-46560	0	+	41661	41661	8553170	4	471,78,126,36,	0,575,2967,4863,
#Deleted in new
chr19_KQ458386v1_fix	57284	131514	chr19_KQ458386v1_fix:57284-131514	0	+	57284	57284	8553170	12	259,115,120,87,88,79,82,86,93,231,148,341,	0,52951,53353,57285,58395,60468,61746,62608,66820,69437,70278,73889,
#Deleted in new
chr19_KQ458386v1_fix	57305	141219	chr19_KQ458386v1_fix:57305-141219	3	+	57381	139068	0	21	238,115,120,87,88,79,82,86,93,231,148,151,109,141,183,135,180,147,81,159,2310,	0,52930,53332,57264,58374,60447,61725,62587,66799,69416,70257,73868,75944,76267,76487,76761,78054,79287,80276,81326,81604,
#Deleted in new
chr19_KQ458386v1_fix	57373	139780	chr19_KQ458386v1_fix:57373-139780	0	+	57373	139656	8553170	3	170,115,156,	0,52862,82251,
#Deleted in new
chr19_KQ458386v1_fix	57373	139083	chr19_KQ458386v1_fix:57373-139083	1	+	57381	139068	0	14	170,93,231,148,151,109,141,183,135,180,147,81,159,174,	0,66731,69348,70189,73800,75876,76199,76419,76693,77986,79219,80208,81258,81536,
#Deleted in new
chr19_KQ458386v1_fix	57381	139068	chr19_KQ458386v1_fix:57381-139068	1	+	57381	139068	8553170	11	162,110,109,141,183,135,180,147,81,159,159,	0,52854,75868,76191,76411,76685,77978,79211,80200,81250,81528,
#Deleted in new
chr19_KQ458386v1_fix	57828	119059	chr19_KQ458386v1_fix:57828-119059	0	+	57828	57828	8553170	7	68,115,120,87,88,79,29,	0,52407,52809,56741,57851,59924,61202,
#Deleted in new
chr19_KQ458386v1_fix	93508	103242	chr19_KQ458386v1_fix:93508-103242	3	-	93508	93508	8553170	2	136,106,	0,9628,
#Deleted in new
chr19_KQ458386v1_fix	117777	126952	chr19_KQ458386v1_fix:117777-126952	0	+	117777	126952	8553170	5	54,82,86,93,231,	0,1253,3134,6327,8944,
#Deleted in new
chr19_KQ458386v1_fix	120468	126753	chr19_KQ458386v1_fix:120468-126753	0	+	120468	120468	8553170	3	529,93,32,	0,3636,6253,
#Deleted in new
chr19_KQ458386v1_fix	133792	141219	chr19_KQ458386v1_fix:133792-141219	0	+	133792	139068	8553170	7	183,135,180,147,66,159,2310,	0,274,1567,2800,4159,4839,5117,
#Deleted in new
chr19_KQ458386v1_fix	137491	139456	chr19_KQ458386v1_fix:137491-139456	0	+	137491	137491	8553170	3	171,159,547,	0,1140,1418,
#Deleted in new
chr19_KQ458386v1_fix	137780	139057	chr19_KQ458386v1_fix:137780-139057	0	+	137780	137780	8553170	3	237,159,148,	0,851,1129,
#Deleted in new
chr19_KQ458386v1_fix	139827	154078	chr19_KQ458386v1_fix:139827-154078	1	-	140487	151492	8553170	21	687,59,117,79,63,71,58,60,43,209,12,233,164,75,86,75,169,134,119,70,546,	0,773,915,3511,3950,4127,4621,5178,5310,5885,6327,6931,7250,8048,8193,8349,9826,11552,12185,12809,13705,
#Deleted in new
chr19_KQ458386v1_fix	139827	154078	chr19_KQ458386v1_fix:139827-154078	3	-	140487	151492	789624	21	687,59,117,79,63,71,58,60,43,209,12,233,164,75,86,75,169,134,119,70,546,	0,773,915,3511,3950,4127,4621,5178,5310,5885,6327,6931,7250,8048,8193,8349,9826,11552,12185,12809,13705,
#Deleted in new
chr19_KQ458386v1_fix	147886	149466	chr19_KQ458386v1_fix:147886-149466	3	+	147886	147886	8553170	1	1580,	0,
#Deleted in new
chr19_KQ458386v1_fix	180609	183148	chr19_KQ458386v1_fix:180609-183148	3	-	180665	183132	0	4	170,202,89,22,	0,859,2045,2517,
#Deleted in new
chr19_KQ458386v1_fix	180610	181831	chr19_KQ458386v1_fix:180610-181831	0	-	180610	180610	8553170	2	169,363,	0,858,
#Deleted in new
chr19_KQ458386v1_fix	198915	201430	chr19_KQ458386v1_fix:198915-201430	3	+	198915	201375	0	4	6,89,202,169,	0,389,1462,2346,
#Deleted in new
chr19_KQ458386v1_fix	198975	200524	chr19_KQ458386v1_fix:198975-200524	0	+	200418	200524	8553170	2	418,147,	0,1402,
#Deleted in new
chr19_KQ458386v1_fix	206683	206791	chr19_KQ458386v1_fix:206683-206791	3	-	206683	206683	8553170	1	108,	0,
#Deleted in new
chr19_KQ458386v1_fix	206998	207376	chr19_KQ458386v1_fix:206998-207376	1	+	206998	207376	8553170	1	378,	0,
#Deleted in new
chr19_KQ458386v1_fix	206998	207376	chr19_KQ458386v1_fix:206998-207376	3	+	206998	207376	8553170	1	378,	0,
#Deleted in new
chr19_KQ458386v1_fix	211353	216179	chr19_KQ458386v1_fix:211353-216179	0	-	213265	216179	8553170	5	240,166,89,149,47,	0,321,645,1833,4779,
#Deleted in new
chr19_KQ458386v1_fix	211361	223036	chr19_KQ458386v1_fix:211361-223036	3	-	211446	222558	0	10	232,166,89,30,39,27,135,205,89,523,	0,313,637,1825,2045,2172,4771,7054,10741,11152,
#Deleted in new
chr19_KQ458386v1_fix	211441	218477	chr19_KQ458386v1_fix:211441-218477	0	-	211446	218477	8553170	7	152,166,89,30,27,135,62,	0,233,557,1745,2092,4691,6974,
#Deleted in new
chr19_KQ458386v1_fix	211565	213316	chr19_KQ458386v1_fix:211565-213316	0	-	211565	211565	8553170	4	28,166,89,130,	0,109,433,1621,
#Deleted in new
chr19_KQ458386v1_fix	212025	222617	chr19_KQ458386v1_fix:212025-222617	0	-	212025	212025	8553170	6	62,374,135,205,89,104,	0,1161,4107,6390,10077,10488,
#Deleted in new
chr19_KQ458386v1_fix	212684	222553	chr19_KQ458386v1_fix:212684-222553	0	-	212684	212684	8553170	5	876,135,205,89,40,	0,3448,5731,9418,9829,
#Deleted in new
chr19_KQ458386v1_fix	213321	218620	chr19_KQ458386v1_fix:213321-218620	0	-	213321	213321	8553170	4	124,27,135,205,	0,212,2811,5094,
#Deleted in new
chr19_KQ458386v1_fix	216132	222617	chr19_KQ458386v1_fix:216132-222617	0	-	216132	216132	8553170	3	135,89,104,	0,5970,6381,
#Deleted in new
chr19_KQ458386v1_fix	217258	217447	chr19_KQ458386v1_fix:217258-217447	1	+	217258	217447	8553170	1	189,	0,
#Deleted in new
chr19_KQ458386v1_fix	217258	217447	chr19_KQ458386v1_fix:217258-217447	3	+	217258	217447	8553170	1	189,	0,
#Deleted in new
chr19_KQ458386v1_fix	218569	222617	chr19_KQ458386v1_fix:218569-222617	0	-	218569	222146	8553170	2	51,515,	0,3533,
#Deleted in new
chr19_KQ458386v1_fix	225093	241677	chr19_KQ458386v1_fix:225093-241677	3	-	225284	241444	0	10	296,151,72,71,65,49,125,89,208,285,	0,435,862,1031,1643,1894,2029,15656,15887,16299,
#Deleted in new
chr19_KQ458386v1_fix	225093	225942	chr19_KQ458386v1_fix:225093-225942	0	-	225093	225093	8553170	2	296,414,	0,435,
#Deleted in new
chr19_KQ458386v1_fix	225154	227036	chr19_KQ458386v1_fix:225154-227036	0	-	225154	225154	8553170	5	235,499,71,65,49,	0,374,970,1582,1833,
#Deleted in new
chr19_KQ458386v1_fix	225528	241433	chr19_KQ458386v1_fix:225528-241433	0	-	225528	241433	8553170	8	151,71,65,49,125,89,208,41,	0,596,1208,1459,1594,15221,15452,15864,
#Deleted in new
chr19_KQ458386v1_fix	225807	241447	chr19_KQ458386v1_fix:225807-241447	0	-	225807	225807	8553170	8	220,71,65,49,125,89,208,55,	0,317,929,1180,1315,14942,15173,15585,
#Deleted in new
chr19_KQ458386v1_fix	226141	241454	chr19_KQ458386v1_fix:226141-241454	0	-	241151	241444	8553170	7	54,65,49,125,89,208,87,	0,595,846,981,14608,14839,15226,
#Deleted in new
chr19_KQ458386v1_fix	226606	241461	chr19_KQ458386v1_fix:226606-241461	0	-	226606	226606	8553170	4	641,89,208,69,	0,14143,14374,14786,
#Deleted in new
chr19_KQ458386v1_fix	226693	241513	chr19_KQ458386v1_fix:226693-241513	0	-	226693	226693	8553170	5	108,260,89,208,121,	0,294,14056,14287,14699,
#Deleted in new
chr19_KQ458386v1_fix	226939	241426	chr19_KQ458386v1_fix:226939-241426	0	-	226939	226939	8553170	5	97,125,89,208,34,	0,183,13810,14041,14453,
#Deleted in new
chr19_KQ458386v1_fix	226967	241461	chr19_KQ458386v1_fix:226967-241461	0	-	226967	241444	8553170	5	69,125,89,208,69,	0,155,13782,14013,14425,
#Deleted in new
chr19_KQ458386v1_fix	227142	249850	chr19_KQ458386v1_fix:227142-249850	3	-	227142	249850	8553170	8	105,89,208,96,58,202,122,83,	0,13607,13838,19913,20123,20926,21423,22625,
#Deleted in new
chr19_KQ458386v1_fix	227142	249850	chr19_KQ458386v1_fix:227142-249850	0	-	227142	249850	8553170	4	105,96,58,83,	0,19913,20123,22625,
#Deleted in new
chr19_KQ458386v1_fix	229837	232895	chr19_KQ458386v1_fix:229837-232895	3	+	229837	229837	8553170	2	327,239,	0,2819,
#Deleted in new
chr19_KQ458386v1_fix	240575	241084	chr19_KQ458386v1_fix:240575-241084	0	-	240575	240575	8553170	2	263,93,	0,416,
#Deleted in new
chr19_KQ458386v1_fix	240575	241060	chr19_KQ458386v1_fix:240575-241060	0	-	240575	240575	8553170	2	263,80,	0,405,
#Deleted in new
chr19_KQ458386v1_fix	240749	241331	chr19_KQ458386v1_fix:240749-241331	0	-	240749	241000	8553170	2	89,351,	0,231,
#Deleted in new
chr19_KQ458386v1_fix	240749	241447	chr19_KQ458386v1_fix:240749-241447	0	-	240749	241444	8553170	2	89,80,	0,618,
#Deleted in new
chr19_KQ458386v1_fix	240749	241438	chr19_KQ458386v1_fix:240749-241438	0	-	240749	240749	8553170	2	89,46,	0,643,
#Deleted in new
chr19_KQ458386v1_fix	240806	241346	chr19_KQ458386v1_fix:240806-241346	0	-	240806	241000	8553170	3	32,208,68,	0,174,472,
#Deleted in new
chr19_KQ458386v1_fix	241121	241420	chr19_KQ458386v1_fix:241121-241420	0	-	241121	241420	8553170	2	67,142,	0,157,
#Deleted in new
chr19_KQ458386v1_fix	246059	260005	chr19_KQ458386v1_fix:246059-260005	3	-	246393	259638	0	13	393,96,58,202,122,281,72,73,97,86,238,119,634,	0,996,1206,2009,2506,3708,4100,7454,7620,9262,9465,10928,13312,
#Deleted in new
chr19_KQ458386v1_fix	246059	257106	chr19_KQ458386v1_fix:246059-257106	0	-	246393	257106	8553170	11	393,96,58,202,122,464,73,97,86,238,119,	0,996,1206,2009,2506,3708,7454,7620,9262,9465,10928,
#Deleted in new
chr19_KQ458386v1_fix	246060	249336	chr19_KQ458386v1_fix:246060-249336	0	-	246060	246060	8553170	4	1091,58,202,771,	0,1205,2008,2505,
#Deleted in new
chr19_KQ458386v1_fix	246066	260827	chr19_KQ458386v1_fix:246066-260827	0	-	246393	260827	8553170	13	386,96,58,202,122,281,72,73,97,86,238,119,88,	0,989,1199,2002,2499,3701,4093,7447,7613,9255,9458,10921,14673,
#Deleted in new
chr19_KQ458386v1_fix	246066	247257	chr19_KQ458386v1_fix:246066-247257	0	-	246066	246066	8553170	2	386,202,	0,989,
#Deleted in new
chr19_KQ458386v1_fix	246066	262019	chr19_KQ458386v1_fix:246066-262019	0	-	251295	255749	8553170	14	386,96,58,202,122,281,72,70,73,97,86,238,119,52,	0,989,1199,2002,2499,3701,4093,5218,7447,7613,9255,9458,10921,15901,
#Deleted in new
chr19_KQ458386v1_fix	246069	252000	chr19_KQ458386v1_fix:246069-252000	0	-	246069	246069	8553170	6	383,96,58,202,122,2233,	0,986,1196,1999,2496,3698,
#Deleted in new
chr19_KQ458386v1_fix	246069	251421	chr19_KQ458386v1_fix:246069-251421	0	-	246069	246069	8553170	7	383,96,58,202,122,281,1262,	0,986,1196,1999,2496,3698,4090,
#Deleted in new
chr19_KQ458386v1_fix	246306	262010	chr19_KQ458386v1_fix:246306-262010	1	-	246393	255749	0	13	146,96,58,202,122,281,72,73,97,86,238,119,43,	0,749,959,1762,2259,3461,3853,7207,7373,9015,9218,10681,15661,
#Deleted in new
chr19_KQ458386v1_fix	248323	249850	chr19_KQ458386v1_fix:248323-249850	0	-	248323	248323	8553170	2	364,83,	0,1444,
#Deleted in new
chr19_KQ458386v1_fix	249974	261997	chr19_KQ458386v1_fix:249974-261997	0	-	249974	249974	8553170	7	257,73,97,86,238,119,30,	0,3539,3705,5347,5550,7013,11993,
#Deleted in new
chr19_KQ458386v1_fix	253042	262010	chr19_KQ458386v1_fix:253042-262010	0	-	253042	253042	8553170	6	544,97,86,238,119,43,	0,637,2279,2482,3945,8925,
#Deleted in new
chr19_KQ458386v1_fix	253528	259040	chr19_KQ458386v1_fix:253528-259040	0	-	253528	259040	8553170	6	58,97,86,238,119,61,	0,151,1793,1996,3459,5451,
#Deleted in new
chr19_KQ458386v1_fix	253696	259612	chr19_KQ458386v1_fix:253696-259612	0	-	253696	259612	8553170	5	80,86,238,119,70,	0,1625,1828,3291,5846,
#Deleted in new
chr19_KQ458386v1_fix	254400	255171	chr19_KQ458386v1_fix:254400-255171	3	-	254400	254400	8553170	2	206,287,	0,484,
#Deleted in new
chr19_KQ458386v1_fix	255338	257304	chr19_KQ458386v1_fix:255338-257304	0	-	255338	255338	8553170	3	69,238,317,	0,186,1649,
#Deleted in new
chr19_KQ458386v1_fix	277505	279715	chr19_KQ458386v1_fix:277505-279715	0	-	278795	279715	8553170	3	1577,132,101,	0,1739,2109,
#Deleted in new
chr19_KQ458386v1_fix	278653	287929	chr19_KQ458386v1_fix:278653-287929	0	-	278653	278653	8553170	9	185,164,132,318,423,793,160,89,26,	0,265,591,961,1588,2096,7349,7711,9250,
#Deleted in new
chr19_KQ458386v1_fix	278653	286453	chr19_KQ458386v1_fix:278653-286453	1	-	278775	281513	789624	11	185,164,132,318,423,150,65,73,103,144,89,	0,265,591,961,1588,2096,2665,2816,4904,7349,7711,
#Deleted in new
chr19_KQ458386v1_fix	278653	287951	chr19_KQ458386v1_fix:278653-287951	3	-	278775	286414	789624	12	185,164,132,318,423,150,65,73,103,160,89,48,	0,265,591,961,1588,2096,2665,2816,4904,7349,7711,9250,
#Deleted in new
chr19_KQ458386v1_fix	278902	279597	chr19_KQ458386v1_fix:278902-279597	0	-	278902	278902	8553170	2	180,353,	0,342,
#Deleted in new
chr19_KQ458386v1_fix	278955	279593	chr19_KQ458386v1_fix:278955-279593	0	-	278955	279281	8553170	3	127,132,87,	0,289,551,
#Deleted in new
chr19_KQ458386v1_fix	279830	283435	chr19_KQ458386v1_fix:279830-283435	3	+	279830	279830	8553170	3	122,169,213,	0,487,3392,
#Deleted in new
chr19_KQ458386v1_fix	280241	280523	chr19_KQ458386v1_fix:280241-280523	0	-	280241	280241	8553170	2	82,104,	0,178,
#Deleted in new
chr19_KQ458386v1_fix	281137	287938	chr19_KQ458386v1_fix:281137-287938	0	-	281137	281137	8553170	3	405,103,35,	0,2420,6766,
#Deleted in new
chr19_KQ458386v1_fix	283422	287936	chr19_KQ458386v1_fix:283422-287936	0	-	283422	283422	8553170	4	238,144,89,33,	0,2580,2942,4481,
#Deleted in new
chr19_KQ458386v1_fix	283557	287945	chr19_KQ458386v1_fix:283557-287945	0	-	283557	283557	8553170	3	103,451,42,	0,2445,4346,
#Deleted in new
chr19_KQ458386v1_fix	288226	309534	chr19_KQ458386v1_fix:288226-309534	3	-	289151	303491	789624	13	756,67,48,56,60,130,69,57,107,42,114,49,357,	0,879,2295,2545,2877,5072,10532,11134,11300,11548,14859,15264,20951,
#Deleted in new
chr19_KQ458386v1_fix	288228	309495	chr19_KQ458386v1_fix:288228-309495	1	-	288826	309193	0	16	754,67,71,52,77,56,60,130,69,57,107,42,114,49,47,318,	0,877,1075,2128,2264,2543,2875,5070,10530,11132,11298,11546,14857,15262,19822,20949,
#Deleted in new
chr19_KQ458386v1_fix	288228	304082	chr19_KQ458386v1_fix:288228-304082	0	-	288228	288228	789624	13	754,67,71,52,77,56,60,130,69,57,107,42,997,	0,877,1075,2128,2264,2543,2875,5070,10530,11132,11298,11546,14857,
#Deleted in new
chr19_KQ458386v1_fix	288228	303780	chr19_KQ458386v1_fix:288228-303780	0	-	288228	288228	8553170	5	2180,671,130,1058,695,	0,2264,5070,10530,14857,
#Deleted in new
chr19_KQ458386v1_fix	288228	309534	chr19_KQ458386v1_fix:288228-309534	1	-	288826	303491	0	15	754,67,71,52,77,56,60,130,69,57,107,42,114,49,357,	0,877,1075,2128,2264,2543,2875,5070,10530,11132,11298,11546,14857,15262,20949,
#Deleted in new
chr19_KQ458386v1_fix	288779	304545	chr19_KQ458386v1_fix:288779-304545	1	-	288779	304545	8553170	16	150,51,67,71,52,77,56,60,130,69,57,107,42,114,49,18,	0,152,326,524,1577,1713,1992,2324,4519,9979,10581,10747,10995,14306,14711,15748,
#Deleted in new
chr19_KQ458386v1_fix	288965	289825	chr19_KQ458386v1_fix:288965-289825	0	-	288965	288965	8553170	3	17,67,522,	0,140,338,
#Deleted in new
chr19_KQ458386v1_fix	290492	309495	chr19_KQ458386v1_fix:290492-309495	0	-	290492	303491	8553170	13	77,56,60,130,69,57,107,42,114,49,47,125,318,	0,279,611,2806,8266,8868,9034,9282,12593,12998,17558,17973,18685,
#Deleted in new
chr19_KQ458386v1_fix	290771	309350	chr19_KQ458386v1_fix:290771-309350	0	-	298980	303491	8553170	11	56,60,130,69,70,57,107,42,114,49,173,	0,332,2527,7987,8154,8589,8755,9003,12314,12719,18406,
#Deleted in new
chr19_KQ458386v1_fix	291103	309383	chr19_KQ458386v1_fix:291103-309383	0	-	303124	309193	8553170	10	60,130,69,57,107,42,114,153,47,206,	0,2195,7655,8257,8423,8671,11982,12387,16947,18074,
#Deleted in new
chr19_KQ458386v1_fix	293310	309386	chr19_KQ458386v1_fix:293310-309386	0	-	293310	303491	8553170	9	118,69,57,107,42,114,49,125,209,	0,5448,6050,6216,6464,9775,10180,15155,15867,
#Deleted in new
chr19_KQ458386v1_fix	298758	303949	chr19_KQ458386v1_fix:298758-303949	0	-	298758	303491	8553170	6	69,57,107,42,114,459,	0,602,768,1016,4327,4732,
#Deleted in new
chr19_KQ458386v1_fix	298840	309272	chr19_KQ458386v1_fix:298840-309272	0	-	298840	298840	8553170	7	155,57,107,42,114,49,95,	0,520,686,934,4245,4650,10337,
#Deleted in new
chr19_KQ458386v1_fix	298902	309190	chr19_KQ458386v1_fix:298902-309190	0	-	298902	298902	8553170	6	93,273,42,114,49,13,	0,458,872,4183,4588,10275,
#Deleted in new
chr19_KQ458386v1_fix	299368	309274	chr19_KQ458386v1_fix:299368-309274	0	-	300329	303491	8553170	7	49,107,42,98,114,49,97,	0,158,406,868,3717,4122,9809,
#Deleted in new
chr19_KQ458386v1_fix	299531	309253	chr19_KQ458386v1_fix:299531-309253	0	-	301594	303491	8553170	6	102,42,173,114,49,76,	0,243,1934,3554,3959,9646,
#Deleted in new
chr19_KQ458386v1_fix	299554	309317	chr19_KQ458386v1_fix:299554-309317	0	-	299554	303491	8553170	5	79,42,114,180,140,	0,220,3531,3936,9623,
#Deleted in new
chr19_KQ458386v1_fix	299570	309383	chr19_KQ458386v1_fix:299570-309383	0	-	299570	303491	8553170	5	63,42,114,153,206,	0,204,3515,3920,9607,
#Deleted in new
chr19_KQ458386v1_fix	308051	309260	chr19_KQ458386v1_fix:308051-309260	0	-	308051	308051	8553170	2	535,83,	0,1126,
#Deleted in new
chr19_KQ458386v1_fix	309371	318563	chr19_KQ458386v1_fix:309371-318563	3	+	314765	318504	789624	6	40,106,334,89,261,161,	0,5315,5502,7521,7699,9031,
#Deleted in new
chr19_KQ458386v1_fix	309371	317321	chr19_KQ458386v1_fix:309371-317321	0	+	314765	317321	8553170	5	40,106,334,89,251,	0,5315,5502,7521,7699,
#Deleted in new
chr19_KQ458386v1_fix	309623	318210	chr19_KQ458386v1_fix:309623-318210	1	+	309704	317379	789624	5	260,106,334,89,1140,	0,5063,5250,7269,7447,
#Deleted in new
chr19_KQ458386v1_fix	309649	316949	chr19_KQ458386v1_fix:309649-316949	0	+	309744	316949	8553170	4	102,50,334,57,	0,5093,5224,7243,
#Deleted in new
chr19_KQ458386v1_fix	309651	318565	chr19_KQ458386v1_fix:309651-318565	0	+	309704	314761	789624	5	232,50,334,89,1495,	0,5091,5222,7241,7419,
#Deleted in new
chr19_KQ458386v1_fix	309670	318558	chr19_KQ458386v1_fix:309670-318558	1	+	309704	318504	789624	6	213,106,334,89,261,156,	0,5016,5203,7222,7400,8732,
#Deleted in new
chr19_KQ458386v1_fix	318651	320546	chr19_KQ458386v1_fix:318651-320546	0	-	318852	320546	8553170	3	210,48,312,	0,298,1583,
#Deleted in new
chr19_KQ458386v1_fix	318651	321830	chr19_KQ458386v1_fix:318651-321830	3	-	318907	321830	789624	5	346,521,88,41,61,	0,1583,2586,2832,3118,
#Deleted in new
chr19_KQ458386v1_fix	324937	325718	chr19_KQ458386v1_fix:324937-325718	0	-	324937	324937	8553170	2	484,206,	0,575,
#Deleted in new
chr19_KQ458386v1_fix	324937	340568	chr19_KQ458386v1_fix:324937-340568	1	-	325277	340408	789624	16	484,66,93,94,110,88,46,109,48,106,64,55,141,30,96,427,	0,575,771,955,2458,2655,2828,3156,3500,4496,4820,6126,6261,6972,10939,15204,
#Deleted in new
chr19_KQ458386v1_fix	324940	339805	chr19_KQ458386v1_fix:324940-339805	1	-	325277	331082	8553170	16	481,66,93,94,110,88,46,109,48,106,64,55,70,30,96,75,	0,572,768,952,2455,2652,2825,3153,3497,4493,4817,6123,6258,6969,10936,14790,
#Deleted in new
chr19_KQ458386v1_fix	324970	340430	chr19_KQ458386v1_fix:324970-340430	1	-	325277	340408	8553170	16	451,66,93,94,104,94,46,109,48,106,64,55,141,30,96,289,	0,542,738,922,2425,2616,2795,3123,3467,4463,4787,6093,6228,6939,10906,15171,
#Deleted in new
chr19_KQ458386v1_fix	324989	327499	chr19_KQ458386v1_fix:324989-327499	1	-	325090	327499	8553170	6	173,135,66,93,94,104,	0,297,523,719,903,2406,
#Deleted in new
chr19_KQ458386v1_fix	325075	359527	chr19_KQ458386v1_fix:325075-359527	3	-	325277	359527	8553170	20	346,66,93,94,110,88,46,109,48,106,64,55,141,30,96,69,136,96,112,62,	0,437,633,817,2320,2517,2690,3018,3362,4358,4682,5988,6123,6834,10801,27279,29565,31068,33163,34390,
#Deleted in new
chr19_KQ458386v1_fix	325235	340433	chr19_KQ458386v1_fix:325235-340433	1	-	325277	340408	789624	17	186,66,93,94,110,88,46,109,48,106,64,55,70,77,30,96,292,	0,277,473,657,2160,2357,2530,2858,3202,4198,4522,5828,5963,6438,6674,10641,14906,
#Deleted in new
chr19_KQ458386v1_fix	325879	327596	chr19_KQ458386v1_fix:325879-327596	0	-	325879	325879	8553170	2	107,201,	0,1516,
#Deleted in new
chr19_KQ458386v1_fix	327397	340432	chr19_KQ458386v1_fix:327397-340432	0	-	328469	340408	8553170	11	108,88,46,109,48,106,55,141,30,96,291,	0,195,368,696,1040,2036,3666,3801,4512,8479,12744,
#Deleted in new
chr19_KQ458386v1_fix	327485	329456	chr19_KQ458386v1_fix:327485-329456	0	-	327485	327485	8553170	4	326,109,48,23,	0,608,952,1948,
#Deleted in new
chr19_KQ458386v1_fix	327708	329671	chr19_KQ458386v1_fix:327708-329671	0	-	327708	327708	8553170	4	103,109,48,238,	0,385,729,1725,
#Deleted in new
chr19_KQ458386v1_fix	329470	331546	chr19_KQ458386v1_fix:329470-331546	0	-	329470	329470	8553170	4	69,64,55,348,	0,287,1593,1728,
#Deleted in new
chr19_KQ458386v1_fix	331063	340431	chr19_KQ458386v1_fix:331063-340431	0	-	331253	340408	8553170	5	55,70,30,96,290,	0,135,846,4813,9078,
#Deleted in new
chr19_KQ458386v1_fix	331307	340435	chr19_KQ458386v1_fix:331307-340435	2	-	331307	331307	8553170	3	632,96,294,	0,4569,8834,
#Deleted in new
chr19_KQ458386v1_fix	331683	340431	chr19_KQ458386v1_fix:331683-340431	0	-	338016	340408	8553170	5	67,30,96,82,290,	0,226,4193,6257,8458,
#Deleted in new
chr19_KQ458386v1_fix	340219	342692	chr19_KQ458386v1_fix:340219-342692	3	+	340966	342372	0	3	451,68,688,	0,728,1785,
#Deleted in new
chr19_KQ458386v1_fix	340615	341533	chr19_KQ458386v1_fix:340615-341533	0	+	340615	340615	8553170	2	55,586,	0,332,
#Deleted in new
chr19_KQ458386v1_fix	340625	342834	chr19_KQ458386v1_fix:340625-342834	1	+	340966	342372	0	2	390,830,	0,1379,
#Deleted in new
chr19_KQ458386v1_fix	340670	342692	chr19_KQ458386v1_fix:340670-342692	1	+	340966	342372	0	3	173,68,688,	0,277,1334,
#Deleted in new
chr19_KQ458386v1_fix	344968	348304	chr19_KQ458386v1_fix:344968-348304	3	-	344968	344968	8553170	1	3336,	0,
#Deleted in new
chr19_KQ458386v1_fix	351072	385582	chr19_KQ458386v1_fix:351072-385582	3	-	352279	359991	789624	6	1351,136,96,112,366,325,	0,3568,5071,7166,8570,34185,
#Deleted in new
chr19_KQ458386v1_fix	351949	356388	chr19_KQ458386v1_fix:351949-356388	0	-	351949	351949	8553170	2	474,1748,	0,2691,
#Deleted in new
chr19_KQ458386v1_fix	351949	362359	chr19_KQ458386v1_fix:351949-362359	1	-	352279	359991	789624	6	474,136,96,112,366,115,	0,2691,4194,6289,7693,10295,
#Deleted in new
chr19_KQ458386v1_fix	352202	356718	chr19_KQ458386v1_fix:352202-356718	0	-	352202	352202	8553170	3	221,136,575,	0,2438,3941,
#Deleted in new
chr19_KQ458386v1_fix	352353	385374	chr19_KQ458386v1_fix:352353-385374	0	-	356204	359991	8553170	6	70,136,134,112,366,117,	0,2287,3790,5885,7289,32904,
#Deleted in new
chr19_KQ458386v1_fix	354399	358275	chr19_KQ458386v1_fix:354399-358275	0	-	354625	358275	8553170	3	377,96,37,	0,1744,3839,
#Deleted in new
chr19_KQ458386v1_fix	354651	359838	chr19_KQ458386v1_fix:354651-359838	0	-	357068	359838	8553170	4	391,1667,112,196,	0,772,3587,4991,
#Deleted in new
chr19_KV575246v1_alt	5575	5859	chr19_KV575246v1_alt:5575-5859	7	+	5575	5575	16724991	1	284,	0,
#Deleted in new
chr19_KV575246v1_alt	9539	15077	chr19_KV575246v1_alt:9539-15077	7	+	9539	9539	16724991	7	523,285,310,297,303,51,358,	0,686,1120,1639,2191,4981,5180,
#Deleted in new
chr19_KV575246v1_alt	10225	14856	chr19_KV575246v1_alt:10225-14856	5	+	10225	10225	16724991	6	285,310,297,303,51,137,	0,434,953,1505,4295,4494,
#Deleted in new
chr19_KV575246v1_alt	26102	38166	chr19_KV575246v1_alt:26102-38166	3	+	26120	37726	789624	8	52,36,285,300,294,105,53,566,	0,768,1574,3132,5014,10780,11347,11498,
#Deleted in new
chr19_KV575246v1_alt	26119	99918	chr19_KV575246v1_alt:26119-99918	3	+	26119	26119	8553170	6	35,36,285,300,294,344,	0,46362,61976,63711,65538,73455,
#Deleted in new
chr19_KV575246v1_alt	40143	54670	chr19_KV575246v1_alt:40143-54670	3	+	40174	54137	0	8	65,36,300,294,51,105,53,686,	0,974,3452,5267,8809,13123,13690,13841,
#Deleted in new
chr19_KV575246v1_alt	57730	69001	chr19_KV575246v1_alt:57730-69001	1	+	57730	69001	789624	10	37,110,36,108,43,294,51,105,53,174,	0,2505,2616,2653,2763,4334,7793,10379,10946,11097,
#Deleted in new
chr19_KV575246v1_alt	57730	69001	chr19_KV575246v1_alt:57730-69001	3	+	57730	69001	789624	10	37,110,36,108,43,294,51,105,53,174,	0,2505,2616,2653,2763,4334,7793,10379,10946,11097,
#Deleted in new
chr19_KV575246v1_alt	71443	85955	chr19_KV575246v1_alt:71443-85955	3	+	71483	85446	789624	8	74,36,300,294,51,102,53,686,	0,1038,3522,5354,8801,13111,13675,13826,
#Deleted in new
chr19_KV575246v1_alt	71457	85498	chr19_KV575246v1_alt:71457-85498	1	+	71483	85446	789624	9	60,36,300,294,51,78,102,53,229,	0,1024,3508,5340,8787,10264,13097,13661,13812,
#Deleted in new
chr19_KV575246v1_alt	87987	91951	chr19_KV575246v1_alt:87987-91951	7	+	87987	87987	16724991	3	34,300,294,	0,1843,3670,
#Deleted in new
chr19_KV575246v1_alt	105166	116151	chr19_KV575246v1_alt:105166-116151	3	+	105166	115746	789624	8	157,36,285,294,51,104,54,675,	0,356,1258,2416,5298,9593,10157,10310,
#Deleted in new
chr19_KV575246v1_alt	105242	116152	chr19_KV575246v1_alt:105242-116152	1	+	105283	115336	789624	8	81,36,285,294,51,104,53,676,	0,280,1182,2340,5222,9517,10082,10234,
#Deleted in new
chr19_KV575246v1_alt	105271	116152	chr19_KV575246v1_alt:105271-116152	0	+	105271	105271	8553170	5	52,36,285,293,676,	0,251,1153,2311,10205,
#Deleted in new
chr19_KV575246v1_alt	105271	116152	chr19_KV575246v1_alt:105271-116152	0	+	105271	105271	8553170	7	52,36,285,294,104,53,676,	0,251,1153,2311,9488,10053,10205,
#Deleted in new
chr19_KV575246v1_alt	105271	116152	chr19_KV575246v1_alt:105271-116152	1	+	105283	115746	789624	6	52,36,285,294,53,676,	0,251,1153,2311,10053,10205,
#Deleted in new
chr19_KV575246v1_alt	105271	116152	chr19_KV575246v1_alt:105271-116152	1	+	105283	115746	789624	7	52,36,285,294,51,53,676,	0,251,1153,2311,5193,10053,10205,
#Deleted in new
chr19_KV575246v1_alt	105272	115757	chr19_KV575246v1_alt:105272-115757	1	+	105283	115746	789624	5	51,36,294,53,281,	0,250,2310,10052,10204,
#Deleted in new
chr19_KV575246v1_alt	105283	116028	chr19_KV575246v1_alt:105283-116028	1	+	105283	115746	789624	6	40,36,294,51,53,552,	0,239,2299,5181,10041,10193,
#Deleted in new
chr19_KV575246v1_alt	105288	116152	chr19_KV575246v1_alt:105288-116152	0	+	105288	115746	789624	8	35,36,285,294,51,171,53,676,	0,234,1136,2294,5176,9471,10036,10188,
#Deleted in new
chr19_KV575246v1_alt	118102	132434	chr19_KV575246v1_alt:118102-132434	3	+	118135	131931	789624	9	67,36,285,300,294,51,105,53,680,	0,1085,1866,3264,5116,8581,12914,13481,13652,
#Deleted in new
chr19_KV575246v1_alt	118121	132433	chr19_KV575246v1_alt:118121-132433	1	+	118135	131931	789624	8	48,36,285,300,294,105,53,679,	0,1066,1847,3245,5097,12895,13462,13633,
#Deleted in new
chr19_KV575246v1_alt	118124	132434	chr19_KV575246v1_alt:118124-132434	1	+	118135	131931	789624	8	45,36,300,294,51,105,53,680,	0,1063,3242,5094,8559,12892,13459,13630,
#Deleted in new
chr19_KV575246v1_alt	134331	150012	chr19_KV575246v1_alt:134331-150012	3	+	134420	149386	789624	8	123,36,300,272,51,105,53,668,	0,2192,4689,6541,9980,14295,14862,15013,
#Deleted in new
chr19_KV575246v1_alt	134420	148661	chr19_KV575246v1_alt:134420-148661	0	+	134420	148661	789624	5	34,36,300,272,35,	0,2103,4600,6452,14206,
#Deleted in new
chr19_KV575247v1_alt	5575	5859	chr19_KV575247v1_alt:5575-5859	7	+	5575	5575	16724991	1	284,	0,
#Deleted in new
chr19_KV575247v1_alt	9539	15077	chr19_KV575247v1_alt:9539-15077	7	+	9539	9539	16724991	7	523,285,310,297,303,51,358,	0,686,1120,1639,2191,4981,5180,
#Deleted in new
chr19_KV575247v1_alt	10225	14856	chr19_KV575247v1_alt:10225-14856	5	+	10225	10225	16724991	6	285,310,297,303,51,137,	0,434,953,1505,4295,4494,
#Deleted in new
chr19_KV575247v1_alt	26102	38157	chr19_KV575247v1_alt:26102-38157	3	+	26120	37717	789624	8	52,36,285,300,294,105,53,566,	0,768,1574,3132,5014,10771,11338,11489,
#Deleted in new
chr19_KV575247v1_alt	26119	99926	chr19_KV575247v1_alt:26119-99926	3	+	26119	26119	8553170	6	35,36,285,300,294,344,	0,46370,61983,63718,65545,73463,
#Deleted in new
chr19_KV575247v1_alt	40135	54693	chr19_KV575247v1_alt:40135-54693	3	+	40166	54160	789624	8	65,36,300,294,51,105,53,686,	0,992,3465,5278,8840,13154,13721,13872,
#Deleted in new
chr19_KV575247v1_alt	56662	69009	chr19_KV575247v1_alt:56662-69009	7	+	56662	56662	16724991	9	34,36,282,299,294,51,105,53,177,	0,1091,1851,3585,5407,8866,11452,12019,12170,
#Deleted in new
chr19_KV575247v1_alt	71451	85962	chr19_KV575247v1_alt:71451-85962	3	+	71491	85453	789624	8	74,36,300,294,51,102,53,686,	0,1038,3522,5351,8800,13110,13674,13825,
#Deleted in new
chr19_KV575247v1_alt	71465	85505	chr19_KV575247v1_alt:71465-85505	1	+	71491	85453	789624	9	60,36,300,294,51,78,102,53,229,	0,1024,3508,5337,8786,10263,13096,13660,13811,
#Deleted in new
chr19_KV575247v1_alt	87994	91958	chr19_KV575247v1_alt:87994-91958	7	+	87994	87994	16724991	3	34,300,294,	0,1843,3670,
#Deleted in new
chr19_KV575247v1_alt	105177	116159	chr19_KV575247v1_alt:105177-116159	1	+	105177	115754	789624	8	157,36,285,294,51,104,54,675,	0,356,1258,2416,5298,9590,10154,10307,
#Deleted in new
chr19_KV575247v1_alt	105253	116160	chr19_KV575247v1_alt:105253-116160	1	+	105294	115344	789624	8	81,36,285,294,51,104,53,676,	0,280,1182,2340,5222,9514,10079,10231,
#Deleted in new
chr19_KV575247v1_alt	105282	116160	chr19_KV575247v1_alt:105282-116160	1	+	105294	115754	789624	6	52,36,285,294,53,676,	0,251,1153,2311,10050,10202,
#Deleted in new
chr19_KV575247v1_alt	105282	116160	chr19_KV575247v1_alt:105282-116160	0	+	105282	105282	8553170	7	52,36,285,294,104,53,676,	0,251,1153,2311,9485,10050,10202,
#Deleted in new
chr19_KV575247v1_alt	105282	116160	chr19_KV575247v1_alt:105282-116160	2	+	105282	105282	8553170	5	52,36,285,293,676,	0,251,1153,2311,10202,
#Deleted in new
chr19_KV575247v1_alt	105282	116160	chr19_KV575247v1_alt:105282-116160	1	+	105294	115754	789624	7	52,36,285,294,51,53,676,	0,251,1153,2311,5193,10050,10202,
#Deleted in new
chr19_KV575247v1_alt	105283	115765	chr19_KV575247v1_alt:105283-115765	1	+	105294	115754	789624	5	51,36,294,53,281,	0,250,2310,10049,10201,
#Deleted in new
chr19_KV575247v1_alt	105294	116036	chr19_KV575247v1_alt:105294-116036	1	+	105294	115754	789624	6	40,36,294,51,53,552,	0,239,2299,5181,10038,10190,
#Deleted in new
chr19_KV575247v1_alt	105299	116160	chr19_KV575247v1_alt:105299-116160	0	+	105299	115754	789624	8	35,36,285,294,51,171,53,676,	0,234,1136,2294,5176,9468,10033,10185,
#Deleted in new
chr19_KV575247v1_alt	118110	132421	chr19_KV575247v1_alt:118110-132421	3	+	118143	131918	0	9	67,36,285,300,294,51,105,53,680,	0,1066,1847,3245,5097,8560,12893,13460,13631,
#Deleted in new
chr19_KV575247v1_alt	118129	132420	chr19_KV575247v1_alt:118129-132420	1	+	118143	131918	789624	8	48,36,285,300,294,105,53,679,	0,1047,1828,3226,5078,12874,13441,13612,
#Deleted in new
chr19_KV575247v1_alt	118132	132421	chr19_KV575247v1_alt:118132-132421	1	+	118143	131918	0	8	45,36,300,294,51,105,53,680,	0,1044,3223,5075,8538,12871,13438,13609,
#Deleted in new
chr19_KV575247v1_alt	134318	150212	chr19_KV575247v1_alt:134318-150212	3	+	134407	149586	789624	8	123,36,300,272,51,105,53,668,	0,2403,4900,6752,10192,14508,15075,15226,
#Deleted in new
chr19_KV575247v1_alt	134407	148861	chr19_KV575247v1_alt:134407-148861	0	+	134407	148861	789624	5	34,36,300,272,35,	0,2314,4811,6663,14419,
#Deleted in new
chr19_KV575247v1_alt	152085	168847	chr19_KV575247v1_alt:152085-168847	3	+	152118	168371	789624	9	67,36,285,300,294,51,105,53,686,	0,777,1555,3304,5176,8635,15359,15924,16076,
#Deleted in new
chr19_KV575247v1_alt	152118	168600	chr19_KV575247v1_alt:152118-168600	1	+	152118	168371	789624	8	34,36,285,300,294,105,53,439,	0,744,1522,3271,5143,15326,15891,16043,
#Deleted in new
chr19_KV575248v1_alt	5575	5859	chr19_KV575248v1_alt:5575-5859	7	+	5575	5575	16724991	1	284,	0,
#Deleted in new
chr19_KV575248v1_alt	9539	15077	chr19_KV575248v1_alt:9539-15077	7	+	9539	9539	16724991	7	523,285,310,297,303,51,358,	0,686,1120,1639,2191,4981,5180,
#Deleted in new
chr19_KV575248v1_alt	10225	14856	chr19_KV575248v1_alt:10225-14856	5	+	10225	10225	16724991	6	285,310,297,303,51,137,	0,434,953,1505,4295,4494,
#Deleted in new
chr19_KV575248v1_alt	26111	38130	chr19_KV575248v1_alt:26111-38130	3	+	26129	37690	789624	8	52,36,285,300,294,105,53,566,	0,729,1535,3093,4975,10735,11302,11453,
#Deleted in new
chr19_KV575248v1_alt	26128	99892	chr19_KV575248v1_alt:26128-99892	3	+	26128	26128	8553170	6	35,36,285,300,294,344,	0,46330,61941,63676,65503,73420,
#Deleted in new
chr19_KV575248v1_alt	40108	54661	chr19_KV575248v1_alt:40108-54661	3	+	40139	54128	789624	8	65,36,300,294,51,105,53,686,	0,992,3465,5278,8835,13149,13716,13867,
#Deleted in new
chr19_KV575248v1_alt	56631	68978	chr19_KV575248v1_alt:56631-68978	7	+	56631	56631	16724991	9	34,36,282,299,294,51,105,53,177,	0,1091,1851,3585,5407,8866,11452,12019,12170,
#Deleted in new
chr19_KV575248v1_alt	71420	85930	chr19_KV575248v1_alt:71420-85930	3	+	71460	85421	789624	8	74,36,300,294,51,102,53,686,	0,1038,3522,5351,8799,13109,13673,13824,
#Deleted in new
chr19_KV575248v1_alt	71434	85473	chr19_KV575248v1_alt:71434-85473	1	+	71460	85421	789624	9	60,36,300,294,51,78,102,53,229,	0,1024,3508,5337,8785,10262,13095,13659,13810,
#Deleted in new
chr19_KV575248v1_alt	87961	91925	chr19_KV575248v1_alt:87961-91925	7	+	87961	87961	16724991	3	34,300,294,	0,1843,3670,
#Deleted in new
chr19_KV575248v1_alt	105130	116153	chr19_KV575248v1_alt:105130-116153	1	+	105130	115748	789624	8	157,36,285,294,51,104,54,675,	0,356,1292,2456,5338,9631,10195,10348,
#Deleted in new
chr19_KV575248v1_alt	105206	116154	chr19_KV575248v1_alt:105206-116154	1	+	105247	115338	789624	8	81,36,285,294,51,104,53,676,	0,280,1216,2380,5262,9555,10120,10272,
#Deleted in new
chr19_KV575248v1_alt	105235	116154	chr19_KV575248v1_alt:105235-116154	0	+	105235	105235	8553170	5	52,36,285,293,676,	0,251,1187,2351,10243,
#Deleted in new
chr19_KV575248v1_alt	105235	116154	chr19_KV575248v1_alt:105235-116154	0	+	105235	105235	8553170	7	52,36,285,294,104,53,676,	0,251,1187,2351,9526,10091,10243,
#Deleted in new
chr19_KV575248v1_alt	105235	116154	chr19_KV575248v1_alt:105235-116154	1	+	105247	115748	789624	6	52,36,285,294,53,676,	0,251,1187,2351,10091,10243,
#Deleted in new
chr19_KV575248v1_alt	105235	116154	chr19_KV575248v1_alt:105235-116154	1	+	105247	115748	789624	7	52,36,285,294,51,53,676,	0,251,1187,2351,5233,10091,10243,
#Deleted in new
chr19_KV575248v1_alt	105236	115759	chr19_KV575248v1_alt:105236-115759	1	+	105247	115748	789624	5	51,36,294,53,281,	0,250,2350,10090,10242,
#Deleted in new
chr19_KV575248v1_alt	105247	116030	chr19_KV575248v1_alt:105247-116030	3	+	105247	115748	789624	6	40,36,294,51,53,552,	0,239,2339,5221,10079,10231,
#Deleted in new
chr19_KV575248v1_alt	105252	116154	chr19_KV575248v1_alt:105252-116154	0	+	105252	115748	789624	8	35,36,285,294,51,171,53,676,	0,234,1170,2334,5216,9509,10074,10226,
#Deleted in new
chr19_KV575248v1_alt	118104	132416	chr19_KV575248v1_alt:118104-132416	3	+	118137	131913	789624	9	67,36,285,300,294,51,105,53,680,	0,1066,1847,3245,5097,8560,12894,13461,13632,
#Deleted in new
chr19_KV575248v1_alt	118123	132415	chr19_KV575248v1_alt:118123-132415	1	+	118137	131913	789624	8	48,36,285,300,294,105,53,679,	0,1047,1828,3226,5078,12875,13442,13613,
#Deleted in new
chr19_KV575248v1_alt	118126	132416	chr19_KV575248v1_alt:118126-132416	1	+	118137	131913	789624	8	45,36,300,294,51,105,53,680,	0,1044,3223,5075,8538,12872,13439,13610,
#Deleted in new
chr19_KV575248v1_alt	134313	150206	chr19_KV575248v1_alt:134313-150206	3	+	134402	149580	789624	8	123,36,300,272,51,105,53,668,	0,2403,4900,6752,10191,14507,15074,15225,
#Deleted in new
chr19_KV575248v1_alt	134402	148855	chr19_KV575248v1_alt:134402-148855	0	+	134402	148855	789624	5	34,36,300,272,35,	0,2314,4811,6663,14418,
#Deleted in new
chr19_KV575249v1_alt	5575	5859	chr19_KV575249v1_alt:5575-5859	7	+	5575	5575	16724991	1	284,	0,
#Deleted in new
chr19_KV575249v1_alt	9539	15077	chr19_KV575249v1_alt:9539-15077	7	+	9539	9539	16724991	7	523,285,310,297,303,51,358,	0,686,1120,1639,2191,4981,5180,
#Deleted in new
chr19_KV575249v1_alt	10225	14856	chr19_KV575249v1_alt:10225-14856	5	+	10225	10225	16724991	6	285,310,297,303,51,137,	0,434,953,1505,4295,4494,
#Deleted in new
chr19_KV575249v1_alt	26102	38126	chr19_KV575249v1_alt:26102-38126	3	+	26120	37686	789624	8	52,36,285,300,294,105,53,566,	0,729,1535,3092,4974,10740,11307,11458,
#Deleted in new
chr19_KV575249v1_alt	40102	54630	chr19_KV575249v1_alt:40102-54630	3	+	40133	54097	0	8	65,36,300,294,51,105,53,686,	0,973,3446,5261,8810,13124,13691,13842,
#Deleted in new
chr19_KV575249v1_alt	56600	68949	chr19_KV575249v1_alt:56600-68949	7	+	56600	56600	16724991	9	34,36,282,299,294,51,105,53,177,	0,1091,1851,3585,5409,8868,11454,12021,12172,
#Deleted in new
chr19_KV575249v1_alt	87951	99574	chr19_KV575249v1_alt:87951-99574	3	+	87951	99574	789624	5	48,307,300,294,35,	0,86,1845,3672,11588,
#Deleted in new
chr19_KV575249v1_alt	87951	99574	chr19_KV575249v1_alt:87951-99574	1	+	87951	99574	789624	5	48,307,300,294,35,	0,86,1845,3672,11588,
#Deleted in new
chr19_KV575249v1_alt	105249	115715	chr19_KV575249v1_alt:105249-115715	1	+	105249	115715	789624	8	40,36,285,294,51,105,53,267,	0,239,1141,2305,5187,9481,10047,10199,
#Deleted in new
chr19_KV575249v1_alt	105249	115715	chr19_KV575249v1_alt:105249-115715	1	+	105249	115715	789624	7	40,36,285,294,51,53,267,	0,239,1141,2305,5187,10047,10199,
#Deleted in new
chr19_KV575249v1_alt	105249	115715	chr19_KV575249v1_alt:105249-115715	1	+	105249	115715	789624	8	40,36,285,294,51,105,53,267,	0,239,1141,2305,5187,9481,10047,10199,
#Deleted in new
chr19_KV575249v1_alt	105249	115715	chr19_KV575249v1_alt:105249-115715	3	+	105249	115715	789624	7	40,36,285,294,51,53,267,	0,239,1141,2305,5187,10047,10199,
#Deleted in new
chr19_KV575249v1_alt	105255	115715	chr19_KV575249v1_alt:105255-115715	1	+	105255	115715	789624	6	34,36,294,51,53,267,	0,233,2299,5181,10041,10193,
#Deleted in new
chr19_KV575249v1_alt	105255	115715	chr19_KV575249v1_alt:105255-115715	1	+	105255	115715	789624	6	34,36,294,51,53,267,	0,233,2299,5181,10041,10193,
#Deleted in new
chr19_KV575249v1_alt	118107	131976	chr19_KV575249v1_alt:118107-131976	1	+	118107	131976	789624	6	34,300,294,51,106,40,	0,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575249v1_alt	118107	131976	chr19_KV575249v1_alt:118107-131976	1	+	118107	131976	789624	7	34,36,300,294,51,106,40,	0,1033,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575249v1_alt	118107	131976	chr19_KV575249v1_alt:118107-131976	1	+	118107	131976	789624	8	34,36,285,300,294,51,106,40,	0,1033,1813,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575249v1_alt	118107	143624	chr19_KV575249v1_alt:118107-143624	1	+	118107	143624	789624	9	34,36,285,300,294,51,106,52,156,	0,1033,1813,3586,5466,8930,13261,25209,25361,
#Deleted in new
chr19_KV575249v1_alt	118107	131976	chr19_KV575249v1_alt:118107-131976	1	+	118107	131976	789624	7	34,36,300,294,51,106,40,	0,1033,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575249v1_alt	118107	131976	chr19_KV575249v1_alt:118107-131976	1	+	118107	131976	789624	8	34,36,285,300,294,51,106,40,	0,1033,1813,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575249v1_alt	118107	131976	chr19_KV575249v1_alt:118107-131976	1	+	118107	131976	789624	6	34,300,294,51,106,40,	0,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575249v1_alt	118107	143624	chr19_KV575249v1_alt:118107-143624	1	+	118107	143624	789624	9	34,36,285,300,294,51,106,52,156,	0,1033,1813,3586,5466,8930,13261,25209,25361,
#Deleted in new
chr19_KV575249v1_alt	134745	143735	chr19_KV575249v1_alt:134745-143735	1	+	134745	143735	789624	8	34,36,285,294,51,105,53,267,	0,767,1565,2725,5190,8003,8570,8723,
#Deleted in new
chr19_KV575249v1_alt	134745	160298	chr19_KV575249v1_alt:134745-160298	1	+	134745	160298	789624	8	34,36,300,294,51,105,53,39,	0,12734,15213,17032,20481,24796,25363,25514,
#Deleted in new
chr19_KV575249v1_alt	134745	143735	chr19_KV575249v1_alt:134745-143735	1	+	134745	143735	789624	8	34,36,285,294,51,105,53,267,	0,767,1565,2725,5190,8003,8570,8723,
#Deleted in new
chr19_KV575249v1_alt	134745	160298	chr19_KV575249v1_alt:134745-160298	3	+	134745	160298	789624	8	34,36,300,294,51,105,53,39,	0,12734,15213,17032,20481,24796,25363,25514,
#Deleted in new
chr19_KV575249v1_alt	177764	191731	chr19_KV575249v1_alt:177764-191731	1	+	177764	191731	789624	8	34,36,300,294,51,102,53,174,	0,998,3484,5313,8759,13078,13642,13793,
#Deleted in new
chr19_KV575249v1_alt	177764	191731	chr19_KV575249v1_alt:177764-191731	3	+	177764	191731	789624	8	34,36,300,294,51,102,53,174,	0,998,3484,5313,8759,13078,13642,13793,
#Deleted in new
chr19_KV575249v1_alt	194275	198239	chr19_KV575249v1_alt:194275-198239	7	+	194275	194275	16724991	3	34,300,294,	0,1843,3670,
#Deleted in new
chr19_KV575249v1_alt	210660	221126	chr19_KV575249v1_alt:210660-221126	1	+	210660	221126	789624	8	40,36,285,294,51,105,53,267,	0,239,1141,2305,5187,9481,10047,10199,
#Deleted in new
chr19_KV575249v1_alt	210660	221126	chr19_KV575249v1_alt:210660-221126	1	+	210660	221126	789624	8	40,36,285,294,51,105,53,267,	0,239,1141,2305,5187,9481,10047,10199,
#Deleted in new
chr19_KV575249v1_alt	210660	221126	chr19_KV575249v1_alt:210660-221126	1	+	210660	221126	789624	7	40,36,285,294,51,53,267,	0,239,1141,2305,5187,10047,10199,
#Deleted in new
chr19_KV575249v1_alt	210660	221126	chr19_KV575249v1_alt:210660-221126	3	+	210660	221126	789624	7	40,36,285,294,51,53,267,	0,239,1141,2305,5187,10047,10199,
#Deleted in new
chr19_KV575249v1_alt	210666	221126	chr19_KV575249v1_alt:210666-221126	1	+	210666	221126	789624	6	34,36,294,51,53,267,	0,233,2299,5181,10041,10193,
#Deleted in new
chr19_KV575249v1_alt	210666	221126	chr19_KV575249v1_alt:210666-221126	1	+	210666	221126	789624	6	34,36,294,51,53,267,	0,233,2299,5181,10041,10193,
#Deleted in new
chr19_KV575249v1_alt	223518	237387	chr19_KV575249v1_alt:223518-237387	1	+	223518	237387	789624	7	34,36,300,294,51,106,40,	0,1033,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575249v1_alt	223518	237387	chr19_KV575249v1_alt:223518-237387	1	+	223518	237387	789624	8	34,36,285,300,294,51,106,40,	0,1033,1813,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575249v1_alt	223518	237387	chr19_KV575249v1_alt:223518-237387	1	+	223518	237387	789624	6	34,300,294,51,106,40,	0,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575249v1_alt	223518	237387	chr19_KV575249v1_alt:223518-237387	1	+	223518	237387	789624	7	34,36,300,294,51,106,40,	0,1033,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575249v1_alt	223518	249039	chr19_KV575249v1_alt:223518-249039	1	+	223518	249039	789624	9	34,36,285,300,294,51,106,52,156,	0,1033,1813,3586,5466,8930,13261,25213,25365,
#Deleted in new
chr19_KV575249v1_alt	223518	237387	chr19_KV575249v1_alt:223518-237387	1	+	223518	237387	789624	8	34,36,285,300,294,51,106,40,	0,1033,1813,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575249v1_alt	223518	249039	chr19_KV575249v1_alt:223518-249039	1	+	223518	249039	789624	9	34,36,285,300,294,51,106,52,156,	0,1033,1813,3586,5466,8930,13261,25213,25365,
#Deleted in new
chr19_KV575249v1_alt	223518	237387	chr19_KV575249v1_alt:223518-237387	1	+	223518	237387	789624	6	34,300,294,51,106,40,	0,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575249v1_alt	240156	265888	chr19_KV575249v1_alt:240156-265888	1	+	240156	265888	8553170	8	34,36,300,294,51,105,53,39,	0,12910,15390,17218,20659,24975,25542,25693,
#Deleted in new
chr19_KV575249v1_alt	240156	249150	chr19_KV575249v1_alt:240156-249150	1	+	240156	249150	789624	8	34,36,285,294,51,105,53,267,	0,767,1565,2725,5191,8007,8574,8727,
#Deleted in new
chr19_KV575249v1_alt	240156	249150	chr19_KV575249v1_alt:240156-249150	1	+	240156	249150	789624	8	34,36,285,294,51,105,53,267,	0,767,1565,2725,5191,8007,8574,8727,
#Deleted in new
chr19_KV575249v1_alt	240156	265888	chr19_KV575249v1_alt:240156-265888	3	+	240156	265888	8553170	8	34,36,300,294,51,105,53,39,	0,12910,15390,17218,20659,24975,25542,25693,
#Deleted in new
chr19_KV575249v1_alt	268522	282348	chr19_KV575249v1_alt:268522-282348	1	+	268522	282348	789624	7	34,36,294,51,105,53,39,	0,998,5307,8755,13069,13636,13787,
#Deleted in new
chr19_KV575249v1_alt	268522	282348	chr19_KV575249v1_alt:268522-282348	1	+	268522	282348	8553170	8	34,36,300,294,51,105,53,39,	0,998,3482,5307,8755,13069,13636,13787,
#Deleted in new
chr19_KV575249v1_alt	268522	282348	chr19_KV575249v1_alt:268522-282348	1	+	268522	282348	8553170	8	34,36,300,294,51,105,53,39,	0,998,3482,5307,8755,13069,13636,13787,
#Deleted in new
chr19_KV575249v1_alt	268522	282348	chr19_KV575249v1_alt:268522-282348	3	+	268522	282348	789624	7	34,36,294,51,105,53,39,	0,998,5307,8755,13069,13636,13787,
#Deleted in new
chr19_KV575250v1_alt	5575	5859	chr19_KV575250v1_alt:5575-5859	7	+	5575	5575	16724991	1	284,	0,
#Deleted in new
chr19_KV575250v1_alt	9539	15077	chr19_KV575250v1_alt:9539-15077	7	+	9539	9539	16724991	7	523,285,310,297,303,51,358,	0,686,1120,1639,2191,4981,5180,
#Deleted in new
chr19_KV575250v1_alt	10225	14856	chr19_KV575250v1_alt:10225-14856	5	+	10225	10225	16724991	6	285,310,297,303,51,137,	0,434,953,1505,4295,4494,
#Deleted in new
chr19_KV575250v1_alt	26119	99894	chr19_KV575250v1_alt:26119-99894	3	+	26119	26119	8553170	6	35,36,285,300,294,344,	0,46339,61953,63688,65515,73431,
#Deleted in new
chr19_KV575250v1_alt	40135	54660	chr19_KV575250v1_alt:40135-54660	3	+	40166	54127	0	8	65,36,300,294,51,105,53,686,	0,973,3446,5261,8807,13121,13688,13839,
#Deleted in new
chr19_KV575250v1_alt	71420	85932	chr19_KV575250v1_alt:71420-85932	3	+	71460	85423	789624	8	74,36,300,294,51,102,53,686,	0,1038,3522,5354,8801,13111,13675,13826,
#Deleted in new
chr19_KV575250v1_alt	71434	85475	chr19_KV575250v1_alt:71434-85475	1	+	71460	85423	789624	9	60,36,300,294,51,78,102,53,229,	0,1024,3508,5340,8787,10264,13097,13661,13812,
#Deleted in new
chr19_KV575250v1_alt	87964	91928	chr19_KV575250v1_alt:87964-91928	7	+	87964	87964	16724991	3	34,300,294,	0,1843,3670,
#Deleted in new
chr19_KV575250v1_alt	105268	115734	chr19_KV575250v1_alt:105268-115734	1	+	105268	115734	789624	8	40,36,285,294,51,105,53,267,	0,239,1141,2305,5187,9481,10047,10199,
#Deleted in new
chr19_KV575250v1_alt	105268	115734	chr19_KV575250v1_alt:105268-115734	1	+	105268	115734	789624	8	40,36,285,294,51,105,53,267,	0,239,1141,2305,5187,9481,10047,10199,
#Deleted in new
chr19_KV575250v1_alt	105268	115734	chr19_KV575250v1_alt:105268-115734	1	+	105268	115734	789624	7	40,36,285,294,51,53,267,	0,239,1141,2305,5187,10047,10199,
#Deleted in new
chr19_KV575250v1_alt	105268	115734	chr19_KV575250v1_alt:105268-115734	3	+	105268	115734	789624	7	40,36,285,294,51,53,267,	0,239,1141,2305,5187,10047,10199,
#Deleted in new
chr19_KV575250v1_alt	105274	115734	chr19_KV575250v1_alt:105274-115734	1	+	105274	115734	789624	6	34,36,294,51,53,267,	0,233,2299,5181,10041,10193,
#Deleted in new
chr19_KV575250v1_alt	105274	115734	chr19_KV575250v1_alt:105274-115734	1	+	105274	115734	789624	6	34,36,294,51,53,267,	0,233,2299,5181,10041,10193,
#Deleted in new
chr19_KV575250v1_alt	118127	131996	chr19_KV575250v1_alt:118127-131996	1	+	118127	131996	789624	7	34,36,300,294,51,106,40,	0,1033,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575250v1_alt	118127	131996	chr19_KV575250v1_alt:118127-131996	1	+	118127	131996	789624	8	34,36,285,300,294,51,106,40,	0,1033,1813,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575250v1_alt	118127	131996	chr19_KV575250v1_alt:118127-131996	1	+	118127	131996	789624	6	34,300,294,51,106,40,	0,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575250v1_alt	118127	143648	chr19_KV575250v1_alt:118127-143648	1	+	118127	143648	789624	9	34,36,285,300,294,51,106,52,156,	0,1033,1813,3586,5466,8930,13261,25213,25365,
#Deleted in new
chr19_KV575250v1_alt	118127	143648	chr19_KV575250v1_alt:118127-143648	1	+	118127	143648	789624	9	34,36,285,300,294,51,106,52,156,	0,1033,1813,3586,5466,8930,13261,25213,25365,
#Deleted in new
chr19_KV575250v1_alt	118127	131996	chr19_KV575250v1_alt:118127-131996	1	+	118127	131996	789624	7	34,36,300,294,51,106,40,	0,1033,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575250v1_alt	118127	131996	chr19_KV575250v1_alt:118127-131996	1	+	118127	131996	789624	6	34,300,294,51,106,40,	0,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575250v1_alt	118127	131996	chr19_KV575250v1_alt:118127-131996	3	+	118127	131996	789624	8	34,36,285,300,294,51,106,40,	0,1033,1813,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575250v1_alt	134765	143759	chr19_KV575250v1_alt:134765-143759	1	+	134765	143759	789624	8	34,36,285,294,51,105,53,267,	0,767,1565,2725,5191,8007,8574,8727,
#Deleted in new
chr19_KV575250v1_alt	134765	160497	chr19_KV575250v1_alt:134765-160497	1	+	134765	160497	8553170	8	34,36,300,294,51,105,53,39,	0,12910,15390,17218,20659,24975,25542,25693,
#Deleted in new
chr19_KV575250v1_alt	134765	143759	chr19_KV575250v1_alt:134765-143759	1	+	134765	143759	789624	8	34,36,285,294,51,105,53,267,	0,767,1565,2725,5191,8007,8574,8727,
#Deleted in new
chr19_KV575250v1_alt	134765	160497	chr19_KV575250v1_alt:134765-160497	1	+	134765	160497	8553170	8	34,36,300,294,51,105,53,39,	0,12910,15390,17218,20659,24975,25542,25693,
#Deleted in new
chr19_KV575250v1_alt	163172	176998	chr19_KV575250v1_alt:163172-176998	1	+	163172	176998	789624	8	34,36,300,294,51,105,53,39,	0,998,3482,5307,8755,13069,13636,13787,
#Deleted in new
chr19_KV575250v1_alt	163172	176998	chr19_KV575250v1_alt:163172-176998	3	+	163172	176998	789624	8	34,36,300,294,51,105,53,39,	0,998,3482,5307,8755,13069,13636,13787,
#Deleted in new
chr19_KV575250v1_alt	179496	196283	chr19_KV575250v1_alt:179496-196283	3	+	179529	195807	789624	9	67,36,285,300,294,51,105,53,686,	0,796,1574,3323,5202,8660,15384,15949,16101,
#Deleted in new
chr19_KV575250v1_alt	179529	196036	chr19_KV575250v1_alt:179529-196036	1	+	179529	195807	789624	8	34,36,285,300,294,105,53,439,	0,763,1541,3290,5169,15351,15916,16068,
#Deleted in new
chr19_KV575250v1_alt	198014	198121	chr19_KV575250v1_alt:198014-198121	3	-	198014	198014	8553170	1	107,	0,
#Deleted in new
chr19_KV575250v1_alt	203320	218963	chr19_KV575250v1_alt:203320-218963	1	+	203362	218936	0	3	76,291,242,	0,10987,15401,
#Deleted in new
chr19_KV575250v1_alt	203352	218936	chr19_KV575250v1_alt:203352-218936	0	+	203352	203352	8553170	4	44,78,291,215,	0,6556,10955,15369,
#Deleted in new
chr19_KV575250v1_alt	203352	218140	chr19_KV575250v1_alt:203352-218140	1	+	203362	217438	0	4	44,36,291,1061,	0,1050,10955,13727,
#Deleted in new
chr19_KV575250v1_alt	203352	218140	chr19_KV575250v1_alt:203352-218140	0	+	203362	217438	0	4	44,291,636,92,	0,10955,13727,14696,
#Deleted in new
chr19_KV575250v1_alt	203352	219545	chr19_KV575250v1_alt:203352-219545	1	+	203362	218936	0	5	44,36,291,288,824,	0,1050,10955,13727,15369,
#Deleted in new
chr19_KV575250v1_alt	203357	218963	chr19_KV575250v1_alt:203357-218963	1	+	203362	218936	0	4	39,36,291,242,	0,1045,10950,15364,
#Deleted in new
chr19_KV575250v1_alt	203357	218963	chr19_KV575250v1_alt:203357-218963	1	+	203362	218936	0	5	39,36,291,222,242,	0,1045,10950,13722,15364,
#Deleted in new
chr19_KV575250v1_alt	203362	218936	chr19_KV575250v1_alt:203362-218936	0	+	203362	203362	8553170	5	34,36,78,291,215,	0,1040,6546,10945,15359,
#Deleted in new
chr19_KV575250v1_alt	203362	218936	chr19_KV575250v1_alt:203362-218936	1	+	203362	218936	0	4	34,291,222,215,	0,10945,13717,15359,
#Deleted in new
chr19_KV575250v1_alt	203362	218936	chr19_KV575250v1_alt:203362-218936	1	+	203362	218812	0	4	34,291,214,215,	0,10945,13717,15359,
#Deleted in new
chr19_KV575250v1_alt	203362	218936	chr19_KV575250v1_alt:203362-218936	3	+	203362	218936	0	3	34,288,215,	0,13717,15359,
#Deleted in new
chr19_KV575250v1_alt	203362	218936	chr19_KV575250v1_alt:203362-218936	1	+	203362	218936	0	4	34,291,288,215,	0,10945,13717,15359,
#Deleted in new
chr19_KV575250v1_alt	203362	218936	chr19_KV575250v1_alt:203362-218936	0	+	203362	203362	8553170	6	34,36,78,291,222,215,	0,1040,6546,10945,13717,15359,
#Deleted in new
chr19_KV575250v1_alt	219745	220493	chr19_KV575250v1_alt:219745-220493	3	+	219745	219745	8553170	1	748,	0,
#Deleted in new
chr19_KV575251v1_alt	5575	5859	chr19_KV575251v1_alt:5575-5859	7	+	5575	5575	16724991	1	284,	0,
#Deleted in new
chr19_KV575251v1_alt	9539	15077	chr19_KV575251v1_alt:9539-15077	5	+	9539	9539	16724991	7	523,285,310,297,303,51,358,	0,686,1120,1639,2191,4981,5180,
#Deleted in new
chr19_KV575251v1_alt	10225	14856	chr19_KV575251v1_alt:10225-14856	7	+	10225	10225	16724991	6	285,310,297,303,51,137,	0,434,953,1505,4295,4494,
#Deleted in new
chr19_KV575251v1_alt	26108	38123	chr19_KV575251v1_alt:26108-38123	3	+	26126	37683	789624	8	52,36,285,300,294,105,53,566,	0,729,1535,3093,4971,10731,11298,11449,
#Deleted in new
chr19_KV575251v1_alt	26125	99880	chr19_KV575251v1_alt:26125-99880	3	+	26125	26125	8553170	6	35,36,285,300,294,344,	0,46320,61932,63667,65494,73411,
#Deleted in new
chr19_KV575251v1_alt	40102	54648	chr19_KV575251v1_alt:40102-54648	3	+	40133	54115	789624	8	65,36,300,294,51,105,53,686,	0,992,3465,5278,8828,13142,13709,13860,
#Deleted in new
chr19_KV575251v1_alt	56618	68965	chr19_KV575251v1_alt:56618-68965	7	+	56618	56618	16724991	9	34,36,282,299,294,51,105,53,177,	0,1091,1851,3585,5407,8866,11452,12019,12170,
#Deleted in new
chr19_KV575251v1_alt	71407	85917	chr19_KV575251v1_alt:71407-85917	3	+	71447	85408	789624	8	74,36,300,294,51,102,53,686,	0,1038,3522,5351,8799,13109,13673,13824,
#Deleted in new
chr19_KV575251v1_alt	71421	85460	chr19_KV575251v1_alt:71421-85460	1	+	71447	85408	789624	9	60,36,300,294,51,78,102,53,229,	0,1024,3508,5337,8785,10262,13095,13659,13810,
#Deleted in new
chr19_KV575251v1_alt	87949	91913	chr19_KV575251v1_alt:87949-91913	7	+	87949	87949	16724991	3	34,300,294,	0,1843,3670,
#Deleted in new
chr19_KV575251v1_alt	105234	115734	chr19_KV575251v1_alt:105234-115734	1	+	105234	115734	789624	8	40,36,285,294,51,105,53,267,	0,239,1175,2333,5222,9515,10081,10233,
#Deleted in new
chr19_KV575251v1_alt	105234	115734	chr19_KV575251v1_alt:105234-115734	1	+	105234	115734	789624	7	40,36,285,294,51,53,267,	0,239,1175,2333,5222,10081,10233,
#Deleted in new
chr19_KV575251v1_alt	105234	115734	chr19_KV575251v1_alt:105234-115734	1	+	105234	115734	789624	8	40,36,285,294,51,105,53,267,	0,239,1175,2333,5222,9515,10081,10233,
#Deleted in new
chr19_KV575251v1_alt	105234	115734	chr19_KV575251v1_alt:105234-115734	1	+	105234	115734	789624	7	40,36,285,294,51,53,267,	0,239,1175,2333,5222,10081,10233,
#Deleted in new
chr19_KV575251v1_alt	105240	115734	chr19_KV575251v1_alt:105240-115734	1	+	105240	115734	789624	6	34,36,294,51,53,267,	0,233,2327,5216,10075,10227,
#Deleted in new
chr19_KV575251v1_alt	105240	115734	chr19_KV575251v1_alt:105240-115734	3	+	105240	115734	789624	6	34,36,294,51,53,267,	0,233,2327,5216,10075,10227,
#Deleted in new
chr19_KV575251v1_alt	118093	132407	chr19_KV575251v1_alt:118093-132407	1	+	118126	131904	789624	9	67,36,285,300,294,51,105,53,680,	0,1070,1850,3248,5100,8563,12896,13463,13634,
#Deleted in new
chr19_KV575251v1_alt	118112	132406	chr19_KV575251v1_alt:118112-132406	1	+	118126	131904	789624	8	48,36,285,300,294,105,53,679,	0,1051,1831,3229,5081,12877,13444,13615,
#Deleted in new
chr19_KV575251v1_alt	118115	132407	chr19_KV575251v1_alt:118115-132407	3	+	118126	131904	789624	8	45,36,300,294,51,105,53,680,	0,1048,3226,5078,8541,12874,13441,13612,
#Deleted in new
chr19_KV575251v1_alt	134393	149591	chr19_KV575251v1_alt:134393-149591	1	+	134393	149591	789624	8	34,36,300,294,51,105,53,39,	0,2314,4811,6663,10125,14441,15008,15159,
#Deleted in new
chr19_KV575251v1_alt	134393	149591	chr19_KV575251v1_alt:134393-149591	3	+	134393	149591	789624	8	34,36,300,294,51,105,53,39,	0,2314,4811,6663,10125,14441,15008,15159,
#Deleted in new
chr19_KV575252v1_alt	5575	5859	chr19_KV575252v1_alt:5575-5859	7	+	5575	5575	16724991	1	284,	0,
#Deleted in new
chr19_KV575252v1_alt	9539	15077	chr19_KV575252v1_alt:9539-15077	7	+	9539	9539	16724991	7	523,285,310,297,303,51,358,	0,686,1120,1639,2191,4981,5180,
#Deleted in new
chr19_KV575252v1_alt	10225	14856	chr19_KV575252v1_alt:10225-14856	5	+	10225	10225	16724991	6	285,310,297,303,51,137,	0,434,953,1505,4295,4494,
#Deleted in new
chr19_KV575252v1_alt	26119	99701	chr19_KV575252v1_alt:26119-99701	3	+	26119	26119	8553170	6	35,36,285,300,294,344,	0,46142,61763,63498,65321,73238,
#Deleted in new
chr19_KV575252v1_alt	56429	68780	chr19_KV575252v1_alt:56429-68780	7	+	56429	56429	16724991	9	34,36,282,299,294,51,105,53,177,	0,1091,1852,3587,5409,8870,11456,12023,12174,
#Deleted in new
chr19_KV575252v1_alt	71223	85742	chr19_KV575252v1_alt:71223-85742	3	+	71263	85233	789624	8	74,36,300,294,51,102,53,686,	0,1038,3524,5353,8799,13118,13682,13833,
#Deleted in new
chr19_KV575252v1_alt	71237	85285	chr19_KV575252v1_alt:71237-85285	1	+	71263	85233	789624	9	60,36,300,294,51,78,102,53,229,	0,1024,3510,5339,8785,10262,13104,13668,13819,
#Deleted in new
chr19_KV575252v1_alt	87774	91734	chr19_KV575252v1_alt:87774-91734	7	+	87774	87774	16724991	3	34,300,294,	0,1843,3666,
#Deleted in new
chr19_KV575252v1_alt	105057	115557	chr19_KV575252v1_alt:105057-115557	1	+	105057	115557	789624	8	40,36,285,294,51,105,53,267,	0,239,1175,2333,5222,9515,10081,10233,
#Deleted in new
chr19_KV575252v1_alt	105057	115557	chr19_KV575252v1_alt:105057-115557	1	+	105057	115557	789624	8	40,36,285,294,51,105,53,267,	0,239,1175,2333,5222,9515,10081,10233,
#Deleted in new
chr19_KV575252v1_alt	105057	115557	chr19_KV575252v1_alt:105057-115557	1	+	105057	115557	789624	7	40,36,285,294,51,53,267,	0,239,1175,2333,5222,10081,10233,
#Deleted in new
chr19_KV575252v1_alt	105057	115557	chr19_KV575252v1_alt:105057-115557	3	+	105057	115557	789624	7	40,36,285,294,51,53,267,	0,239,1175,2333,5222,10081,10233,
#Deleted in new
chr19_KV575252v1_alt	105063	115557	chr19_KV575252v1_alt:105063-115557	1	+	105063	115557	789624	6	34,36,294,51,53,267,	0,233,2327,5216,10075,10227,
#Deleted in new
chr19_KV575252v1_alt	105063	115557	chr19_KV575252v1_alt:105063-115557	1	+	105063	115557	789624	6	34,36,294,51,53,267,	0,233,2327,5216,10075,10227,
#Deleted in new
chr19_KV575252v1_alt	117917	132231	chr19_KV575252v1_alt:117917-132231	3	+	117950	131728	789624	9	67,36,285,300,294,51,105,53,680,	0,1070,1850,3248,5100,8563,12896,13463,13634,
#Deleted in new
chr19_KV575252v1_alt	117936	132230	chr19_KV575252v1_alt:117936-132230	1	+	117950	131728	789624	8	48,36,285,300,294,105,53,679,	0,1051,1831,3229,5081,12877,13444,13615,
#Deleted in new
chr19_KV575252v1_alt	117939	132231	chr19_KV575252v1_alt:117939-132231	1	+	117950	131728	789624	8	45,36,300,294,51,105,53,680,	0,1048,3226,5078,8541,12874,13441,13612,
#Deleted in new
chr19_KV575252v1_alt	134217	148536	chr19_KV575252v1_alt:134217-148536	1	+	134217	148536	789624	8	34,36,300,294,51,105,53,39,	0,1435,3932,5784,9246,13562,14129,14280,
#Deleted in new
chr19_KV575252v1_alt	134217	148536	chr19_KV575252v1_alt:134217-148536	3	+	134217	148536	789624	8	34,36,300,294,51,105,53,39,	0,1435,3932,5784,9246,13562,14129,14280,
#Deleted in new
chr19_KV575252v1_alt	151038	167809	chr19_KV575252v1_alt:151038-167809	3	+	151071	167333	789624	9	67,36,285,300,294,51,105,53,686,	0,777,1555,3304,5183,8643,15368,15933,16085,
#Deleted in new
chr19_KV575252v1_alt	151071	167562	chr19_KV575252v1_alt:151071-167562	1	+	151071	167333	789624	8	34,36,285,300,294,105,53,439,	0,744,1522,3271,5150,15335,15900,16052,
#Deleted in new
chr19_KV575252v1_alt	169540	169647	chr19_KV575252v1_alt:169540-169647	3	-	169540	169540	8553170	1	107,	0,
#Deleted in new
chr19_KV575253v1_alt	5575	5859	chr19_KV575253v1_alt:5575-5859	7	+	5575	5575	16724991	1	284,	0,
#Deleted in new
chr19_KV575253v1_alt	9539	15077	chr19_KV575253v1_alt:9539-15077	7	+	9539	9539	16724991	7	523,285,310,297,303,51,358,	0,686,1120,1639,2191,4981,5180,
#Deleted in new
chr19_KV575253v1_alt	10225	14856	chr19_KV575253v1_alt:10225-14856	5	+	10225	10225	16724991	6	285,310,297,303,51,137,	0,434,953,1505,4295,4494,
#Deleted in new
chr19_KV575253v1_alt	26108	38124	chr19_KV575253v1_alt:26108-38124	3	+	26126	37684	789624	8	52,36,285,300,294,105,53,566,	0,729,1535,3093,4971,10732,11299,11450,
#Deleted in new
chr19_KV575253v1_alt	26125	99853	chr19_KV575253v1_alt:26125-99853	3	+	26125	26125	8553170	6	35,36,285,300,294,344,	0,46290,61905,63640,65467,73384,
#Deleted in new
chr19_KV575253v1_alt	40100	54619	chr19_KV575253v1_alt:40100-54619	3	+	40131	54086	0	8	65,36,300,294,51,105,53,686,	0,973,3446,5261,8801,13115,13682,13833,
#Deleted in new
chr19_KV575253v1_alt	56589	68938	chr19_KV575253v1_alt:56589-68938	7	+	56589	56589	16724991	9	34,36,282,299,294,51,105,53,177,	0,1091,1851,3585,5409,8868,11454,12021,12172,
#Deleted in new
chr19_KV575253v1_alt	71377	85890	chr19_KV575253v1_alt:71377-85890	3	+	71417	85381	789624	8	74,36,300,294,51,102,53,686,	0,1038,3522,5354,8802,13112,13676,13827,
#Deleted in new
chr19_KV575253v1_alt	71391	85433	chr19_KV575253v1_alt:71391-85433	1	+	71417	85381	789624	9	60,36,300,294,51,78,102,53,229,	0,1024,3508,5340,8788,10265,13098,13662,13813,
#Deleted in new
chr19_KV575253v1_alt	87922	91886	chr19_KV575253v1_alt:87922-91886	7	+	87922	87922	16724991	3	34,300,294,	0,1843,3670,
#Deleted in new
chr19_KV575253v1_alt	105092	116115	chr19_KV575253v1_alt:105092-116115	1	+	105092	115710	789624	8	157,36,285,294,51,104,54,675,	0,356,1292,2456,5338,9631,10195,10348,
#Deleted in new
chr19_KV575253v1_alt	105168	116116	chr19_KV575253v1_alt:105168-116116	1	+	105209	115300	789624	8	81,36,285,294,51,104,53,676,	0,280,1216,2380,5262,9555,10120,10272,
#Deleted in new
chr19_KV575253v1_alt	105197	116116	chr19_KV575253v1_alt:105197-116116	1	+	105209	115710	789624	6	52,36,285,294,53,676,	0,251,1187,2351,10091,10243,
#Deleted in new
chr19_KV575253v1_alt	105197	116116	chr19_KV575253v1_alt:105197-116116	0	+	105197	105197	8553170	7	52,36,285,294,104,53,676,	0,251,1187,2351,9526,10091,10243,
#Deleted in new
chr19_KV575253v1_alt	105197	116116	chr19_KV575253v1_alt:105197-116116	0	+	105197	105197	8553170	5	52,36,285,293,676,	0,251,1187,2351,10243,
#Deleted in new
chr19_KV575253v1_alt	105197	116116	chr19_KV575253v1_alt:105197-116116	3	+	105209	115710	789624	7	52,36,285,294,51,53,676,	0,251,1187,2351,5233,10091,10243,
#Deleted in new
chr19_KV575253v1_alt	105198	115721	chr19_KV575253v1_alt:105198-115721	1	+	105209	115710	789624	5	51,36,294,53,281,	0,250,2350,10090,10242,
#Deleted in new
chr19_KV575253v1_alt	105209	115992	chr19_KV575253v1_alt:105209-115992	1	+	105209	115710	789624	6	40,36,294,51,53,552,	0,239,2339,5221,10079,10231,
#Deleted in new
chr19_KV575253v1_alt	105214	116116	chr19_KV575253v1_alt:105214-116116	0	+	105214	115710	789624	8	35,36,285,294,51,171,53,676,	0,234,1170,2334,5216,9509,10074,10226,
#Deleted in new
chr19_KV575253v1_alt	118066	132378	chr19_KV575253v1_alt:118066-132378	3	+	118099	131875	789624	9	67,36,285,300,294,51,105,53,680,	0,1066,1847,3245,5097,8560,12894,13461,13632,
#Deleted in new
chr19_KV575253v1_alt	118085	132377	chr19_KV575253v1_alt:118085-132377	1	+	118099	131875	789624	8	48,36,285,300,294,105,53,679,	0,1047,1828,3226,5078,12875,13442,13613,
#Deleted in new
chr19_KV575253v1_alt	118088	132378	chr19_KV575253v1_alt:118088-132378	1	+	118099	131875	789624	8	45,36,300,294,51,105,53,680,	0,1044,3223,5075,8538,12872,13439,13610,
#Deleted in new
chr19_KV575253v1_alt	134275	150168	chr19_KV575253v1_alt:134275-150168	1	+	134364	149542	789624	8	123,36,300,272,51,105,53,668,	0,2403,4900,6752,10191,14507,15074,15225,
#Deleted in new
chr19_KV575253v1_alt	134364	148817	chr19_KV575253v1_alt:134364-148817	2	+	134364	148817	789624	5	34,36,300,272,35,	0,2314,4811,6663,14418,
#Deleted in new
chr19_KV575254v1_alt	5575	5859	chr19_KV575254v1_alt:5575-5859	7	+	5575	5575	16724991	1	284,	0,
#Deleted in new
chr19_KV575254v1_alt	9539	15077	chr19_KV575254v1_alt:9539-15077	7	+	9539	9539	16724991	7	523,285,310,297,303,51,358,	0,686,1120,1639,2191,4981,5180,
#Deleted in new
chr19_KV575254v1_alt	10225	14856	chr19_KV575254v1_alt:10225-14856	5	+	10225	10225	16724991	6	285,310,297,303,51,137,	0,434,953,1505,4295,4494,
#Deleted in new
chr19_KV575254v1_alt	26108	38123	chr19_KV575254v1_alt:26108-38123	3	+	26126	37683	789624	8	52,36,285,300,294,105,53,566,	0,729,1535,3093,4971,10731,11298,11449,
#Deleted in new
chr19_KV575254v1_alt	40101	54640	chr19_KV575254v1_alt:40101-54640	3	+	40132	54107	0	8	65,36,300,294,51,105,53,686,	0,992,3465,5280,8821,13135,13702,13853,
#Deleted in new
chr19_KV575254v1_alt	56610	68959	chr19_KV575254v1_alt:56610-68959	7	+	56610	56610	16724991	9	34,36,282,299,294,51,105,53,177,	0,1091,1851,3585,5409,8868,11454,12021,12172,
#Deleted in new
chr19_KV575254v1_alt	91328	91435	chr19_KV575254v1_alt:91328-91435	3	-	91328	91328	8553170	1	107,	0,
#Deleted in new
chr19_KV575255v1_alt	5575	5859	chr19_KV575255v1_alt:5575-5859	7	+	5575	5575	16724991	1	284,	0,
#Deleted in new
chr19_KV575255v1_alt	9539	15077	chr19_KV575255v1_alt:9539-15077	5	+	9539	9539	16724991	7	523,285,310,297,303,51,358,	0,686,1120,1639,2191,4981,5180,
#Deleted in new
chr19_KV575255v1_alt	10225	14856	chr19_KV575255v1_alt:10225-14856	7	+	10225	10225	16724991	6	285,310,297,303,51,137,	0,434,953,1505,4295,4494,
#Deleted in new
chr19_KV575255v1_alt	26102	38159	chr19_KV575255v1_alt:26102-38159	3	+	26120	37719	789624	8	52,36,285,300,294,105,53,566,	0,768,1574,3131,5013,10773,11340,11491,
#Deleted in new
chr19_KV575255v1_alt	26119	99892	chr19_KV575255v1_alt:26119-99892	3	+	26119	26119	8553170	6	35,36,285,300,294,344,	0,46336,61950,63685,65512,73429,
#Deleted in new
chr19_KV575255v1_alt	40136	54659	chr19_KV575255v1_alt:40136-54659	3	+	40167	54126	0	8	65,36,300,294,51,105,53,686,	0,973,3446,5261,8805,13119,13686,13837,
#Deleted in new
chr19_KV575255v1_alt	56629	68978	chr19_KV575255v1_alt:56629-68978	7	+	56629	56629	16724991	9	34,36,282,299,294,51,105,53,177,	0,1091,1851,3585,5409,8868,11454,12021,12172,
#Deleted in new
chr19_KV575255v1_alt	71417	85929	chr19_KV575255v1_alt:71417-85929	3	+	71457	85420	789624	8	74,36,300,294,51,102,53,686,	0,1038,3522,5354,8801,13111,13675,13826,
#Deleted in new
chr19_KV575255v1_alt	71431	85472	chr19_KV575255v1_alt:71431-85472	1	+	71457	85420	789624	9	60,36,300,294,51,78,102,53,229,	0,1024,3508,5340,8787,10264,13097,13661,13812,
#Deleted in new
chr19_KV575255v1_alt	87961	91925	chr19_KV575255v1_alt:87961-91925	7	+	87961	87961	16724991	3	34,300,294,	0,1843,3670,
#Deleted in new
chr19_KV575255v1_alt	105130	116153	chr19_KV575255v1_alt:105130-116153	3	+	105130	115748	789624	8	157,36,285,294,51,104,54,675,	0,356,1292,2456,5338,9631,10195,10348,
#Deleted in new
chr19_KV575255v1_alt	105206	116154	chr19_KV575255v1_alt:105206-116154	1	+	105247	115338	789624	8	81,36,285,294,51,104,53,676,	0,280,1216,2380,5262,9555,10120,10272,
#Deleted in new
chr19_KV575255v1_alt	105235	116154	chr19_KV575255v1_alt:105235-116154	0	+	105235	105235	8553170	5	52,36,285,293,676,	0,251,1187,2351,10243,
#Deleted in new
chr19_KV575255v1_alt	105235	116154	chr19_KV575255v1_alt:105235-116154	1	+	105247	115748	789624	7	52,36,285,294,51,53,676,	0,251,1187,2351,5233,10091,10243,
#Deleted in new
chr19_KV575255v1_alt	105235	116154	chr19_KV575255v1_alt:105235-116154	1	+	105247	115748	789624	6	52,36,285,294,53,676,	0,251,1187,2351,10091,10243,
#Deleted in new
chr19_KV575255v1_alt	105235	116154	chr19_KV575255v1_alt:105235-116154	0	+	105235	105235	8553170	7	52,36,285,294,104,53,676,	0,251,1187,2351,9526,10091,10243,
#Deleted in new
chr19_KV575255v1_alt	105236	115759	chr19_KV575255v1_alt:105236-115759	1	+	105247	115748	789624	5	51,36,294,53,281,	0,250,2350,10090,10242,
#Deleted in new
chr19_KV575255v1_alt	105247	116030	chr19_KV575255v1_alt:105247-116030	1	+	105247	115748	789624	6	40,36,294,51,53,552,	0,239,2339,5221,10079,10231,
#Deleted in new
chr19_KV575255v1_alt	105252	116154	chr19_KV575255v1_alt:105252-116154	0	+	105252	115748	789624	8	35,36,285,294,51,171,53,676,	0,234,1170,2334,5216,9509,10074,10226,
#Deleted in new
chr19_KV575255v1_alt	118104	132416	chr19_KV575255v1_alt:118104-132416	3	+	118137	131913	789624	9	67,36,285,300,294,51,105,53,680,	0,1066,1847,3245,5097,8560,12894,13461,13632,
#Deleted in new
chr19_KV575255v1_alt	118123	132415	chr19_KV575255v1_alt:118123-132415	1	+	118137	131913	789624	8	48,36,285,300,294,105,53,679,	0,1047,1828,3226,5078,12875,13442,13613,
#Deleted in new
chr19_KV575255v1_alt	118126	132416	chr19_KV575255v1_alt:118126-132416	1	+	118137	131913	789624	8	45,36,300,294,51,105,53,680,	0,1044,3223,5075,8538,12872,13439,13610,
#Deleted in new
chr19_KV575255v1_alt	134313	150206	chr19_KV575255v1_alt:134313-150206	3	+	134402	149580	789624	8	123,36,300,272,51,105,53,668,	0,2403,4900,6752,10191,14507,15074,15225,
#Deleted in new
chr19_KV575255v1_alt	134402	148855	chr19_KV575255v1_alt:134402-148855	0	+	134402	148855	789624	5	34,36,300,272,35,	0,2314,4811,6663,14418,
#Deleted in new
chr19_KV575256v1_alt	5575	5859	chr19_KV575256v1_alt:5575-5859	7	+	5575	5575	16724991	1	284,	0,
#Deleted in new
chr19_KV575256v1_alt	9539	15077	chr19_KV575256v1_alt:9539-15077	5	+	9539	9539	16724991	7	523,285,310,297,303,51,358,	0,686,1120,1639,2191,4981,5180,
#Deleted in new
chr19_KV575256v1_alt	10225	14856	chr19_KV575256v1_alt:10225-14856	7	+	10225	10225	16724991	6	285,310,297,303,51,137,	0,434,953,1505,4295,4494,
#Deleted in new
chr19_KV575256v1_alt	26123	39774	chr19_KV575256v1_alt:26123-39774	3	+	26123	39774	789624	7	34,36,294,51,105,53,39,	0,826,5116,8577,12894,13461,13612,
#Deleted in new
chr19_KV575256v1_alt	26123	39774	chr19_KV575256v1_alt:26123-39774	1	+	26123	39774	789624	7	34,36,300,294,105,53,39,	0,826,3298,5116,12894,13461,13612,
#Deleted in new
chr19_KV575256v1_alt	26123	39774	chr19_KV575256v1_alt:26123-39774	1	+	26123	39774	789624	8	34,36,300,294,51,105,53,39,	0,826,3298,5116,8577,12894,13461,13612,
#Deleted in new
chr19_KV575256v1_alt	26123	39942	chr19_KV575256v1_alt:26123-39942	1	+	26123	39942	789624	8	34,36,300,294,51,105,53,141,	0,826,3298,5116,8577,12894,13461,13678,
#Deleted in new
chr19_KV575256v1_alt	26123	39942	chr19_KV575256v1_alt:26123-39942	1	+	26123	39942	789624	8	34,36,300,294,51,105,53,141,	0,826,3298,5116,8577,12894,13461,13678,
#Deleted in new
chr19_KV575256v1_alt	26123	39774	chr19_KV575256v1_alt:26123-39774	1	+	26123	39774	789624	8	34,36,300,294,51,105,53,39,	0,826,3298,5116,8577,12894,13461,13612,
#Deleted in new
chr19_KV575256v1_alt	26123	39774	chr19_KV575256v1_alt:26123-39774	1	+	26123	39774	789624	7	34,36,300,294,105,53,39,	0,826,3298,5116,12894,13461,13612,
#Deleted in new
chr19_KV575256v1_alt	26123	39774	chr19_KV575256v1_alt:26123-39774	1	+	26123	39774	789624	7	34,36,294,51,105,53,39,	0,826,5116,8577,12894,13461,13612,
#Deleted in new
chr19_KV575256v1_alt	42306	56251	chr19_KV575256v1_alt:42306-56251	1	+	42306	56251	789624	8	34,36,300,294,51,102,53,174,	0,942,3414,5228,8740,13056,13620,13771,
#Deleted in new
chr19_KV575256v1_alt	42306	56251	chr19_KV575256v1_alt:42306-56251	3	+	42306	56251	789624	8	34,36,300,294,51,102,53,174,	0,942,3414,5228,8740,13056,13620,13771,
#Deleted in new
chr19_KV575256v1_alt	58795	67805	chr19_KV575256v1_alt:58795-67805	1	+	58795	67805	8553170	8	34,36,285,294,51,105,53,267,	0,787,1585,2745,5210,8023,8590,8743,
#Deleted in new
chr19_KV575256v1_alt	58795	67805	chr19_KV575256v1_alt:58795-67805	3	+	58795	67805	8553170	8	34,36,285,294,51,105,53,267,	0,787,1585,2745,5210,8023,8590,8743,
#Deleted in new
chr19_KV575256v1_alt	70211	84366	chr19_KV575256v1_alt:70211-84366	1	+	70211	84366	789624	8	34,36,300,294,51,105,53,39,	0,1338,3817,5636,9083,13398,13965,14116,
#Deleted in new
chr19_KV575256v1_alt	70211	84366	chr19_KV575256v1_alt:70211-84366	3	+	70211	84366	789624	8	34,36,300,294,51,105,53,39,	0,1338,3817,5636,9083,13398,13965,14116,
#Deleted in new
chr19_KV575256v1_alt	86999	99350	chr19_KV575256v1_alt:86999-99350	7	+	86999	86999	16724991	9	34,36,282,299,294,51,105,53,177,	0,1091,1852,3587,5409,8870,11456,12023,12174,
#Deleted in new
chr19_KV575256v1_alt	101832	115799	chr19_KV575256v1_alt:101832-115799	1	+	101832	115799	789624	8	34,36,300,294,51,102,53,174,	0,998,3484,5313,8759,13078,13642,13793,
#Deleted in new
chr19_KV575256v1_alt	101832	115799	chr19_KV575256v1_alt:101832-115799	3	+	101832	115799	789624	8	34,36,300,294,51,102,53,174,	0,998,3484,5313,8759,13078,13642,13793,
#Deleted in new
chr19_KV575256v1_alt	118343	122303	chr19_KV575256v1_alt:118343-122303	7	+	118343	118343	16724991	3	34,300,294,	0,1843,3666,
#Deleted in new
chr19_KV575256v1_alt	135635	146101	chr19_KV575256v1_alt:135635-146101	1	+	135635	146101	789624	8	40,36,285,294,51,105,53,267,	0,239,1141,2305,5187,9481,10047,10199,
#Deleted in new
chr19_KV575256v1_alt	135635	146101	chr19_KV575256v1_alt:135635-146101	1	+	135635	146101	789624	7	40,36,285,294,51,53,267,	0,239,1141,2305,5187,10047,10199,
#Deleted in new
chr19_KV575256v1_alt	135635	146101	chr19_KV575256v1_alt:135635-146101	1	+	135635	146101	789624	7	40,36,285,294,51,53,267,	0,239,1141,2305,5187,10047,10199,
#Deleted in new
chr19_KV575256v1_alt	135635	146101	chr19_KV575256v1_alt:135635-146101	3	+	135635	146101	789624	8	40,36,285,294,51,105,53,267,	0,239,1141,2305,5187,9481,10047,10199,
#Deleted in new
chr19_KV575256v1_alt	135641	146101	chr19_KV575256v1_alt:135641-146101	1	+	135641	146101	789624	6	34,36,294,51,53,267,	0,233,2299,5181,10041,10193,
#Deleted in new
chr19_KV575256v1_alt	135641	146101	chr19_KV575256v1_alt:135641-146101	1	+	135641	146101	789624	6	34,36,294,51,53,267,	0,233,2299,5181,10041,10193,
#Deleted in new
chr19_KV575256v1_alt	148494	162363	chr19_KV575256v1_alt:148494-162363	1	+	148494	162363	789624	7	34,36,300,294,51,106,40,	0,1033,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575256v1_alt	148494	162363	chr19_KV575256v1_alt:148494-162363	1	+	148494	162363	789624	8	34,36,285,300,294,51,106,40,	0,1033,1813,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575256v1_alt	148494	162363	chr19_KV575256v1_alt:148494-162363	1	+	148494	162363	789624	6	34,300,294,51,106,40,	0,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575256v1_alt	148494	174011	chr19_KV575256v1_alt:148494-174011	1	+	148494	174011	789624	9	34,36,285,300,294,51,106,52,156,	0,1033,1813,3586,5466,8930,13261,25209,25361,
#Deleted in new
chr19_KV575256v1_alt	148494	162363	chr19_KV575256v1_alt:148494-162363	1	+	148494	162363	789624	7	34,36,300,294,51,106,40,	0,1033,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575256v1_alt	148494	162363	chr19_KV575256v1_alt:148494-162363	1	+	148494	162363	789624	6	34,300,294,51,106,40,	0,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575256v1_alt	148494	174011	chr19_KV575256v1_alt:148494-174011	1	+	148494	174011	789624	9	34,36,285,300,294,51,106,52,156,	0,1033,1813,3586,5466,8930,13261,25209,25361,
#Deleted in new
chr19_KV575256v1_alt	148494	162363	chr19_KV575256v1_alt:148494-162363	3	+	148494	162363	789624	8	34,36,285,300,294,51,106,40,	0,1033,1813,3586,5466,8930,13261,13829,
#Deleted in new
chr19_KV575256v1_alt	165132	174122	chr19_KV575256v1_alt:165132-174122	1	+	165132	174122	789624	8	34,36,285,294,51,105,53,267,	0,767,1565,2725,5190,8003,8570,8723,
#Deleted in new
chr19_KV575256v1_alt	165132	174122	chr19_KV575256v1_alt:165132-174122	1	+	165132	174122	789624	8	34,36,285,294,51,105,53,267,	0,767,1565,2725,5190,8003,8570,8723,
#Deleted in new
chr19_KV575256v1_alt	165132	190684	chr19_KV575256v1_alt:165132-190684	1	+	165132	190684	789624	8	34,36,300,294,51,105,53,39,	0,12734,15213,17032,20479,24795,25362,25513,
#Deleted in new
chr19_KV575256v1_alt	165132	190684	chr19_KV575256v1_alt:165132-190684	1	+	165132	190684	789624	8	34,36,300,294,51,105,53,39,	0,12734,15213,17032,20479,24795,25362,25513,
#Deleted in new
chr19_KV575256v1_alt	193318	207144	chr19_KV575256v1_alt:193318-207144	1	+	193318	207144	789624	7	34,36,294,51,105,53,39,	0,998,5307,8755,13069,13636,13787,
#Deleted in new
chr19_KV575256v1_alt	193318	207144	chr19_KV575256v1_alt:193318-207144	1	+	193318	207144	8553170	8	34,36,300,294,51,105,53,39,	0,998,3482,5307,8755,13069,13636,13787,
#Deleted in new
chr19_KV575256v1_alt	193318	207144	chr19_KV575256v1_alt:193318-207144	1	+	193318	207144	789624	7	34,36,294,51,105,53,39,	0,998,5307,8755,13069,13636,13787,
#Deleted in new
chr19_KV575256v1_alt	193318	207144	chr19_KV575256v1_alt:193318-207144	3	+	193318	207144	8553170	8	34,36,300,294,51,105,53,39,	0,998,3482,5307,8755,13069,13636,13787,
#Deleted in new
chr19_KV575257v1_alt	5575	5859	chr19_KV575257v1_alt:5575-5859	7	+	5575	5575	16724991	1	284,	0,
#Deleted in new
chr19_KV575257v1_alt	9539	15077	chr19_KV575257v1_alt:9539-15077	7	+	9539	9539	16724991	7	523,285,310,297,303,51,358,	0,686,1120,1639,2191,4981,5180,
#Deleted in new
chr19_KV575257v1_alt	10225	14856	chr19_KV575257v1_alt:10225-14856	5	+	10225	10225	16724991	6	285,310,297,303,51,137,	0,434,953,1505,4295,4494,
#Deleted in new
chr19_KV575257v1_alt	40119	54642	chr19_KV575257v1_alt:40119-54642	3	+	40150	54109	789624	8	65,36,300,294,51,105,53,686,	0,992,3464,5278,8805,13119,13686,13837,
#Deleted in new
chr19_KV575257v1_alt	56612	68969	chr19_KV575257v1_alt:56612-68969	7	+	56612	56612	16724991	9	34,36,282,299,294,51,105,53,177,	0,1091,1851,3585,5407,8866,11462,12029,12180,
#Deleted in new
chr19_KV575257v1_alt	74932	77059	chr19_KV575257v1_alt:74932-77059	1	+	74932	77059	789624	2	301,296,	0,1831,
#Deleted in new
chr19_KV575257v1_alt	74932	77059	chr19_KV575257v1_alt:74932-77059	3	+	74932	77059	789624	2	301,296,	0,1831,
#Deleted in new
chr19_KV575257v1_alt	90062	90169	chr19_KV575257v1_alt:90062-90169	3	-	90062	90062	8553170	1	107,	0,
#Deleted in new
chr19_KV575258v1_alt	20565	21313	chr19_KV575258v1_alt:20565-21313	3	-	20565	20565	8553170	1	748,	0,
#Deleted in new
chr19_KV575258v1_alt	21513	37706	chr19_KV575258v1_alt:21513-37706	1	-	22122	37696	0	5	824,288,291,36,44,	0,2178,4947,15107,16149,
#Deleted in new
chr19_KV575258v1_alt	22095	37701	chr19_KV575258v1_alt:22095-37701	1	-	22122	37696	0	4	242,291,36,39,	0,4365,14525,15567,
#Deleted in new
chr19_KV575258v1_alt	22095	37701	chr19_KV575258v1_alt:22095-37701	1	-	22122	37696	0	5	242,222,291,36,39,	0,1662,4365,14525,15567,
#Deleted in new
chr19_KV575258v1_alt	22095	37738	chr19_KV575258v1_alt:22095-37738	1	-	22122	37696	0	3	242,291,76,	0,4365,15567,
#Deleted in new
chr19_KV575258v1_alt	22122	37696	chr19_KV575258v1_alt:22122-37696	1	-	22246	37696	0	4	215,214,291,34,	0,1643,4338,15540,
#Deleted in new
chr19_KV575258v1_alt	22122	37696	chr19_KV575258v1_alt:22122-37696	1	-	22122	37696	0	3	215,288,34,	0,1569,15540,
#Deleted in new
chr19_KV575258v1_alt	22122	37696	chr19_KV575258v1_alt:22122-37696	1	-	22122	37696	0	4	215,288,291,34,	0,1569,4338,15540,
#Deleted in new
chr19_KV575258v1_alt	22122	37696	chr19_KV575258v1_alt:22122-37696	3	-	22122	37696	0	4	215,222,291,34,	0,1635,4338,15540,
#Deleted in new
chr19_KV575258v1_alt	22122	37696	chr19_KV575258v1_alt:22122-37696	0	-	22122	22122	8553170	6	215,222,291,78,36,34,	0,1635,4338,8950,14498,15540,
#Deleted in new
chr19_KV575258v1_alt	22122	37706	chr19_KV575258v1_alt:22122-37706	0	-	22122	22122	8553170	4	215,291,78,44,	0,4338,8950,15540,
#Deleted in new
chr19_KV575258v1_alt	22122	37696	chr19_KV575258v1_alt:22122-37696	0	-	22122	22122	8553170	5	215,291,78,36,34,	0,4338,8950,14498,15540,
#Deleted in new
chr19_KV575258v1_alt	22918	37706	chr19_KV575258v1_alt:22918-37706	1	-	23620	37696	0	4	1061,291,36,44,	0,3542,13702,14744,
#Deleted in new
chr19_KV575258v1_alt	22918	37706	chr19_KV575258v1_alt:22918-37706	0	-	23620	37696	0	4	92,636,291,44,	0,425,3542,14744,
#Deleted in new
chr19_KV575258v1_alt	42940	43047	chr19_KV575258v1_alt:42940-43047	3	+	42940	42940	8553170	1	107,	0,
#Deleted in new
chr19_KV575258v1_alt	44778	61569	chr19_KV575258v1_alt:44778-61569	3	-	45254	61536	789624	9	686,53,105,51,294,300,285,36,67,	0,785,1298,8080,11295,13168,14932,15959,16724,
#Deleted in new
chr19_KV575258v1_alt	45025	61536	chr19_KV575258v1_alt:45025-61536	1	-	45254	61536	789624	8	439,53,105,294,300,285,36,34,	0,538,1051,11048,12921,14685,15712,16477,
#Deleted in new
chr19_KV575258v1_alt	64075	77901	chr19_KV575258v1_alt:64075-77901	1	-	64075	77901	789624	7	39,53,105,51,294,36,34,	0,137,652,5020,8225,12792,13792,
#Deleted in new
chr19_KV575258v1_alt	64075	77901	chr19_KV575258v1_alt:64075-77901	1	-	64075	77901	8553170	8	39,53,105,51,294,300,36,34,	0,137,652,5020,8225,10044,12792,13792,
#Deleted in new
chr19_KV575258v1_alt	64075	77901	chr19_KV575258v1_alt:64075-77901	1	-	64075	77901	789624	8	39,53,105,51,294,300,36,34,	0,137,652,5020,8225,10044,12792,13792,
#Deleted in new
chr19_KV575258v1_alt	64075	77901	chr19_KV575258v1_alt:64075-77901	3	-	64075	77901	789624	7	39,53,105,51,294,36,34,	0,137,652,5020,8225,12792,13792,
#Deleted in new
chr19_KV575258v1_alt	80535	94868	chr19_KV575258v1_alt:80535-94868	1	-	80535	94868	8553170	8	39,53,105,51,294,300,36,34,	0,137,652,5022,8221,10043,12787,14299,
#Deleted in new
chr19_KV575258v1_alt	80535	94868	chr19_KV575258v1_alt:80535-94868	3	-	80535	94868	8553170	8	39,53,105,51,294,300,36,34,	0,137,652,5022,8221,10043,12787,14299,
#Deleted in new
chr19_KV575258v1_alt	97274	106288	chr19_KV575258v1_alt:97274-106288	1	-	97274	106288	789624	8	267,53,105,51,294,285,36,34,	0,367,882,3752,5975,7144,8191,8980,
#Deleted in new
chr19_KV575258v1_alt	97274	106288	chr19_KV575258v1_alt:97274-106288	3	-	97274	106288	789624	8	267,53,105,51,294,285,36,34,	0,367,882,3752,5975,7144,8191,8980,
#Deleted in new
chr19_KV575258v1_alt	108840	122829	chr19_KV575258v1_alt:108840-122829	1	-	108840	122829	789624	8	174,53,102,51,294,300,36,34,	0,272,787,5154,8467,10275,13011,13955,
#Deleted in new
chr19_KV575258v1_alt	108840	122829	chr19_KV575258v1_alt:108840-122829	3	-	108840	122829	789624	8	174,53,102,51,294,300,36,34,	0,272,787,5154,8467,10275,13011,13955,
#Deleted in new
chr19_KV575258v1_alt	125191	153039	chr19_KV575258v1_alt:125191-153039	1	-	125191	153039	789624	8	141,53,105,51,294,300,36,34,	0,305,820,5191,8409,10221,12957,27814,
#Deleted in new
chr19_KV575258v1_alt	125191	153039	chr19_KV575258v1_alt:125191-153039	3	-	125191	153039	789624	8	141,53,105,51,294,300,36,34,	0,305,820,5191,8409,10221,12957,27814,
#Deleted in new
chr19_KV575258v1_alt	125359	153039	chr19_KV575258v1_alt:125359-153039	1	-	125359	153039	789624	7	39,53,105,51,294,36,34,	0,137,652,5023,8241,12789,27646,
#Deleted in new
chr19_KV575258v1_alt	125359	153039	chr19_KV575258v1_alt:125359-153039	1	-	125359	153039	789624	7	39,53,105,294,300,36,34,	0,137,652,8241,10053,12789,27646,
#Deleted in new
chr19_KV575258v1_alt	125359	153039	chr19_KV575258v1_alt:125359-153039	1	-	125359	153039	789624	8	39,53,105,51,294,300,36,34,	0,137,652,5023,8241,10053,12789,27646,
#Deleted in new
chr19_KV575258v1_alt	125359	153039	chr19_KV575258v1_alt:125359-153039	1	-	125359	153039	789624	7	39,53,105,294,300,36,34,	0,137,652,8241,10053,12789,27646,
#Deleted in new
chr19_KV575258v1_alt	125359	153039	chr19_KV575258v1_alt:125359-153039	1	-	125359	153039	789624	8	39,53,105,51,294,300,36,34,	0,137,652,5023,8241,10053,12789,27646,
#Deleted in new
chr19_KV575258v1_alt	125359	153039	chr19_KV575258v1_alt:125359-153039	1	-	125359	153039	789624	7	39,53,105,51,294,36,34,	0,137,652,5023,8241,12789,27646,
#Deleted in new
chr19_KV575259v1_alt	5575	5859	chr19_KV575259v1_alt:5575-5859	7	+	5575	5575	16724991	1	284,	0,
#Deleted in new
chr19_KV575259v1_alt	9539	15077	chr19_KV575259v1_alt:9539-15077	7	+	9539	9539	16724991	7	523,285,310,297,303,51,358,	0,686,1120,1639,2191,4981,5180,
#Deleted in new
chr19_KV575259v1_alt	10225	14856	chr19_KV575259v1_alt:10225-14856	5	+	10225	10225	16724991	6	285,310,297,303,51,137,	0,434,953,1505,4295,4494,
#Deleted in new
chr19_KV575259v1_alt	26102	38156	chr19_KV575259v1_alt:26102-38156	3	+	26120	37716	789624	8	52,36,285,300,294,105,53,566,	0,768,1574,3132,5010,10770,11337,11488,
#Deleted in new
chr19_KV575259v1_alt	26119	99855	chr19_KV575259v1_alt:26119-99855	3	+	26119	26119	8553170	6	35,36,285,300,294,344,	0,46359,61913,63648,65475,73392,
#Deleted in new
chr19_KV575259v1_alt	40134	54681	chr19_KV575259v1_alt:40134-54681	3	+	40165	54148	789624	8	65,36,300,294,51,105,53,686,	0,992,3465,5278,8829,13143,13710,13861,
#Deleted in new
chr19_KV575259v1_alt	56651	68998	chr19_KV575259v1_alt:56651-68998	7	+	56651	56651	16724991	9	34,36,282,299,294,51,105,53,177,	0,1091,1851,3585,5407,8866,11452,12019,12170,
#Deleted in new
chr19_KV575259v1_alt	87924	91888	chr19_KV575259v1_alt:87924-91888	7	+	87924	87924	16724991	3	34,300,294,	0,1843,3670,
#Deleted in new
chr19_KV575259v1_alt	105209	115709	chr19_KV575259v1_alt:105209-115709	1	+	105209	115709	789624	8	40,36,285,294,51,105,53,267,	0,239,1175,2333,5222,9515,10081,10233,
#Deleted in new
chr19_KV575259v1_alt	105209	115709	chr19_KV575259v1_alt:105209-115709	1	+	105209	115709	789624	7	40,36,285,294,51,53,267,	0,239,1175,2333,5222,10081,10233,
#Deleted in new
chr19_KV575259v1_alt	105209	115709	chr19_KV575259v1_alt:105209-115709	1	+	105209	115709	789624	8	40,36,285,294,51,105,53,267,	0,239,1175,2333,5222,9515,10081,10233,
#Deleted in new
chr19_KV575259v1_alt	105209	115709	chr19_KV575259v1_alt:105209-115709	3	+	105209	115709	789624	7	40,36,285,294,51,53,267,	0,239,1175,2333,5222,10081,10233,
#Deleted in new
chr19_KV575259v1_alt	105215	115709	chr19_KV575259v1_alt:105215-115709	1	+	105215	115709	789624	6	34,36,294,51,53,267,	0,233,2327,5216,10075,10227,
#Deleted in new
chr19_KV575259v1_alt	105215	115709	chr19_KV575259v1_alt:105215-115709	1	+	105215	115709	789624	6	34,36,294,51,53,267,	0,233,2327,5216,10075,10227,
#Deleted in new
chr19_KV575259v1_alt	118069	132383	chr19_KV575259v1_alt:118069-132383	3	+	118102	131880	789624	9	67,36,285,300,294,51,105,53,680,	0,1070,1850,3248,5100,8563,12896,13463,13634,
#Deleted in new
chr19_KV575259v1_alt	118088	132382	chr19_KV575259v1_alt:118088-132382	1	+	118102	131880	789624	8	48,36,285,300,294,105,53,679,	0,1051,1831,3229,5081,12877,13444,13615,
#Deleted in new
chr19_KV575259v1_alt	118091	132383	chr19_KV575259v1_alt:118091-132383	1	+	118102	131880	789624	8	45,36,300,294,51,105,53,680,	0,1048,3226,5078,8541,12874,13441,13612,
#Deleted in new
chr19_KV575259v1_alt	134369	149567	chr19_KV575259v1_alt:134369-149567	1	+	134369	149567	789624	8	34,36,300,294,51,105,53,39,	0,2314,4811,6663,10125,14441,15008,15159,
#Deleted in new
chr19_KV575259v1_alt	134369	149567	chr19_KV575259v1_alt:134369-149567	3	+	134369	149567	789624	8	34,36,300,294,51,105,53,39,	0,2314,4811,6663,10125,14441,15008,15159,
#Deleted in new
chr19_KV575259v1_alt	152068	168819	chr19_KV575259v1_alt:152068-168819	3	+	152101	168343	789624	9	67,36,285,300,294,51,105,53,686,	0,758,1536,3285,5164,8624,15348,15913,16065,
#Deleted in new
chr19_KV575259v1_alt	152101	168572	chr19_KV575259v1_alt:152101-168572	1	+	152101	168343	789624	8	34,36,285,300,294,105,53,439,	0,725,1503,3252,5131,15315,15880,16032,
#Deleted in new
chr19_KV575259v1_alt	170550	170657	chr19_KV575259v1_alt:170550-170657	3	-	170550	170550	8553170	1	107,	0,
#Deleted in new
chr19_KV575260v1_alt	5575	5859	chr19_KV575260v1_alt:5575-5859	7	+	5575	5575	16724991	1	284,	0,
#Deleted in new
chr19_KV575260v1_alt	9539	15077	chr19_KV575260v1_alt:9539-15077	7	+	9539	9539	16724991	7	523,285,310,297,303,51,358,	0,686,1120,1639,2191,4981,5180,
#Deleted in new
chr19_KV575260v1_alt	10225	14856	chr19_KV575260v1_alt:10225-14856	5	+	10225	10225	16724991	6	285,310,297,303,51,137,	0,434,953,1505,4295,4494,
#Deleted in new
chr19_KV575260v1_alt	26125	86275	chr19_KV575260v1_alt:26125-86275	3	+	26125	26125	8553170	6	35,36,285,300,294,344,	0,47533,48327,50062,51889,59806,
#Deleted in new
chr19_KV575260v1_alt	56332	70327	chr19_KV575260v1_alt:56332-70327	1	+	56332	70327	789624	8	34,36,300,294,51,102,53,174,	0,942,3414,5228,8790,13106,13670,13821,
#Deleted in new
chr19_KV575260v1_alt	56332	70327	chr19_KV575260v1_alt:56332-70327	3	+	56332	70327	789624	8	34,36,300,294,51,102,53,174,	0,942,3414,5228,8790,13106,13670,13821,
#Deleted in new
chr19_KV575260v1_alt	91524	102506	chr19_KV575260v1_alt:91524-102506	3	+	91524	102101	789624	8	157,36,285,294,51,104,54,675,	0,356,1258,2416,5298,9590,10154,10307,
#Deleted in new
chr19_KV575260v1_alt	91600	102507	chr19_KV575260v1_alt:91600-102507	1	+	91641	101691	789624	8	81,36,285,294,51,104,53,676,	0,280,1182,2340,5222,9514,10079,10231,
#Deleted in new
chr19_KV575260v1_alt	91629	102507	chr19_KV575260v1_alt:91629-102507	1	+	91641	102101	789624	6	52,36,285,294,53,676,	0,251,1153,2311,10050,10202,
#Deleted in new
chr19_KV575260v1_alt	91629	102507	chr19_KV575260v1_alt:91629-102507	1	+	91641	102101	789624	7	52,36,285,294,51,53,676,	0,251,1153,2311,5193,10050,10202,
#Deleted in new
chr19_KV575260v1_alt	91629	102507	chr19_KV575260v1_alt:91629-102507	0	+	91629	91629	8553170	7	52,36,285,294,104,53,676,	0,251,1153,2311,9485,10050,10202,
#Deleted in new
chr19_KV575260v1_alt	91629	102507	chr19_KV575260v1_alt:91629-102507	0	+	91629	91629	8553170	5	52,36,285,293,676,	0,251,1153,2311,10202,
#Deleted in new
chr19_KV575260v1_alt	91630	102112	chr19_KV575260v1_alt:91630-102112	1	+	91641	102101	789624	5	51,36,294,53,281,	0,250,2310,10049,10201,
#Deleted in new
chr19_KV575260v1_alt	91641	102383	chr19_KV575260v1_alt:91641-102383	1	+	91641	102101	789624	6	40,36,294,51,53,552,	0,239,2299,5181,10038,10190,
#Deleted in new
chr19_KV575260v1_alt	91646	102507	chr19_KV575260v1_alt:91646-102507	0	+	91646	102101	789624	8	35,36,285,294,51,171,53,676,	0,234,1136,2294,5176,9468,10033,10185,
#Deleted in new
chr19_KV575260v1_alt	104457	118768	chr19_KV575260v1_alt:104457-118768	3	+	104490	118265	0	9	67,36,285,300,294,51,105,53,680,	0,1066,1847,3245,5097,8560,12893,13460,13631,
#Deleted in new
chr19_KV575260v1_alt	104476	118767	chr19_KV575260v1_alt:104476-118767	1	+	104490	118265	789624	8	48,36,285,300,294,105,53,679,	0,1047,1828,3226,5078,12874,13441,13612,
#Deleted in new
chr19_KV575260v1_alt	104479	118768	chr19_KV575260v1_alt:104479-118768	1	+	104490	118265	0	8	45,36,300,294,51,105,53,680,	0,1044,3223,5075,8538,12871,13438,13609,
#Deleted in new
chr19_KV575260v1_alt	120665	136559	chr19_KV575260v1_alt:120665-136559	3	+	120754	135933	789624	8	123,36,300,272,51,105,53,668,	0,2403,4900,6752,10192,14508,15075,15226,
#Deleted in new
chr19_KV575260v1_alt	120754	135208	chr19_KV575260v1_alt:120754-135208	0	+	120754	135208	789624	5	34,36,300,272,35,	0,2314,4811,6663,14419,
#Deleted in new
chr1_GL383518v1_alt	128	426	chr1_GL383518v1_alt:128-426	3	+	128	128	8553170	1	298,	0,
#Deleted in new
chr1_GL383518v1_alt	13302	14347	chr1_GL383518v1_alt:13302-14347	7	-	13302	13302	16724991	2	520,232,	0,813,
#Deleted in new
chr1_GL383518v1_alt	20797	21095	chr1_GL383518v1_alt:20797-21095	3	+	20797	20797	8553170	1	298,	0,
#Deleted in new
chr1_GL383518v1_alt	33992	35016	chr1_GL383518v1_alt:33992-35016	7	-	33992	33992	16724991	2	502,211,	0,813,
#Deleted in new
chr1_GL383518v1_alt	42952	43054	chr1_GL383518v1_alt:42952-43054	3	-	42952	42952	8553170	1	102,	0,
#Deleted in new
chr1_GL383518v1_alt	44767	91509	chr1_GL383518v1_alt:44767-91509	3	+	45335	89971	789624	30	718,84,84,114,85,67,145,130,98,192,88,80,92,107,120,130,55,104,45,120,154,69,76,114,49,168,101,73,157,1616,	0,12584,13218,18890,19212,20622,23028,24212,26575,29505,31459,32244,32760,33503,34661,35166,35765,36051,36623,36877,39607,40826,41702,42131,42618,43729,44273,44572,44858,45126,
#Deleted in new
chr1_GL383518v1_alt	44791	90236	chr1_GL383518v1_alt:44791-90236	1	+	45335	89971	789624	31	121,232,84,84,114,85,67,145,130,98,192,88,80,92,107,120,130,55,104,45,120,154,69,76,114,49,168,101,73,157,343,	0,462,12560,13194,18866,19188,20598,23004,24188,26551,29481,31435,32220,32736,33479,34637,35142,35741,36027,36599,36853,39583,40802,41678,42107,42594,43705,44249,44548,44834,45102,
#Deleted in new
chr1_GL383518v1_alt	45183	90780	chr1_GL383518v1_alt:45183-90780	0	+	45183	45183	8553170	29	302,84,84,1799,145,130,118,98,192,88,80,92,107,120,130,55,104,45,120,154,69,76,114,49,168,101,73,157,887,	0,12168,12802,18474,22612,23796,25218,26159,29089,31043,31828,32344,33087,34245,34750,35349,35635,36207,36461,39191,40410,41286,41715,42202,43313,43857,44156,44442,44710,
#Deleted in new
chr1_GL383518v1_alt	63551	67928	chr1_GL383518v1_alt:63551-67928	3	-	63551	63551	8553170	2	154,81,	0,4296,
#Deleted in new
chr1_GL383518v1_alt	67554	90429	chr1_GL383518v1_alt:67554-90429	1	+	67829	89971	789624	23	386,130,98,192,88,80,92,107,120,130,55,104,45,120,154,69,76,114,49,168,372,157,536,	0,1425,3788,6718,8672,9457,9973,10716,11874,12379,12978,13264,13836,14090,16820,18039,18915,19344,19831,20942,21486,22071,22339,
#Deleted in new
chr1_GL383518v1_alt	67683	68877	chr1_GL383518v1_alt:67683-68877	3	-	67683	67683	8553170	2	209,107,	0,1087,
#Deleted in new
chr1_GL383518v1_alt	67835	90780	chr1_GL383518v1_alt:67835-90780	0	+	67835	77778	789624	25	105,130,98,192,88,80,92,90,107,120,130,55,104,45,120,154,69,76,114,49,168,101,73,157,887,	0,1144,3507,6437,8391,9176,9692,9885,10435,11593,12098,12697,12983,13555,13809,16539,17758,18634,19063,19550,20661,21205,21504,21790,22058,
#Deleted in new
chr1_GL383518v1_alt	68777	77603	chr1_GL383518v1_alt:68777-77603	0	+	68777	68777	8553170	6	332,98,192,88,80,76,	0,2565,5495,7449,8234,8750,
#Deleted in new
chr1_GL383518v1_alt	74337	90020	chr1_GL383518v1_alt:74337-90020	0	+	74337	78291	789624	18	127,107,120,130,55,104,45,120,154,69,76,114,49,168,101,73,157,127,	0,3933,5091,5596,6195,6481,7053,7307,10037,11256,12132,12561,13048,14159,14703,15002,15288,15556,
#Deleted in new
chr1_GL383518v1_alt	76374	79541	chr1_GL383518v1_alt:76374-79541	0	+	76374	76374	8553170	2	2003,113,	0,3054,
#Deleted in new
chr1_GL383518v1_alt	83175	90780	chr1_GL383518v1_alt:83175-90780	0	+	83175	83175	8553170	10	1353,69,76,114,49,168,101,73,157,887,	0,2418,3294,3723,4210,5321,5865,6164,6450,6718,
#Deleted in new
chr1_GL383518v1_alt	83531	90780	chr1_GL383518v1_alt:83531-90780	0	+	83531	83531	8553170	9	997,69,76,114,49,168,372,157,887,	0,2062,2938,3367,3854,4965,5509,6094,6362,
#Deleted in new
chr1_GL383518v1_alt	89071	90780	chr1_GL383518v1_alt:89071-90780	3	-	89779	90313	789624	4	68,74,157,887,	0,267,554,822,
#Deleted in new
chr1_GL383518v1_alt	89734	91509	chr1_GL383518v1_alt:89734-91509	0	+	89734	89971	789624	3	48,139,291,	0,159,1484,
#Deleted in new
chr1_GL383518v1_alt	91054	96858	chr1_GL383518v1_alt:91054-96858	3	+	91814	96703	789624	10	1811,210,159,125,195,91,199,98,131,332,	0,2164,2708,3407,3807,4109,4333,4760,4989,5472,
#Deleted in new
chr1_GL383518v1_alt	91992	96858	chr1_GL383518v1_alt:91992-96858	1	+	92057	96703	789624	10	873,210,159,125,195,91,199,98,131,332,	0,1226,1770,2469,2869,3171,3395,3822,4051,4534,
#Deleted in new
chr1_GL383518v1_alt	92013	96857	chr1_GL383518v1_alt:92013-96857	0	+	92013	92013	8553170	11	136,198,210,159,125,195,48,199,98,131,331,	0,654,1205,1749,2448,2848,3193,3374,3801,4030,4513,
#Deleted in new
chr1_GL383518v1_alt	92019	96857	chr1_GL383518v1_alt:92019-96857	0	+	92019	92019	8553170	2	1409,3095,	0,1743,
#Deleted in new
chr1_GL383518v1_alt	92450	96825	chr1_GL383518v1_alt:92450-96825	0	+	92450	92450	8553170	5	415,210,159,1313,299,	0,768,1312,2411,4076,
#Deleted in new
chr1_GL383518v1_alt	93296	96858	chr1_GL383518v1_alt:93296-96858	0	+	93296	96703	789624	9	132,159,125,195,91,199,98,131,227,	0,466,1165,1565,1867,2091,2518,2747,3335,
#Deleted in new
chr1_GL383518v1_alt	93300	94786	chr1_GL383518v1_alt:93300-94786	0	+	93300	93300	8553170	3	128,159,325,	0,462,1161,
#Deleted in new
chr1_GL383518v1_alt	94687	95497	chr1_GL383518v1_alt:94687-95497	0	+	94687	94687	8553170	2	369,334,	0,476,
#Deleted in new
chr1_GL383518v1_alt	94897	96088	chr1_GL383518v1_alt:94897-96088	0	+	94897	96088	789624	5	159,91,40,98,45,	0,266,649,917,1146,
#Deleted in new
chr1_GL383518v1_alt	95212	96584	chr1_GL383518v1_alt:95212-96584	0	+	95212	96584	789624	5	42,128,98,131,58,	0,246,602,831,1314,
#Deleted in new
chr1_GL383518v1_alt	95340	96335	chr1_GL383518v1_alt:95340-96335	0	+	95340	95340	8553170	3	246,98,292,	0,474,703,
#Deleted in new
chr1_GL383518v1_alt	95751	96852	chr1_GL383518v1_alt:95751-96852	0	+	95751	95751	8553170	3	161,131,326,	0,292,775,
#Deleted in new
chr1_GL383518v1_alt	95901	96825	chr1_GL383518v1_alt:95901-96825	0	+	95901	95901	8553170	2	273,299,	0,625,
#Deleted in new
chr1_GL383518v1_alt	102420	102522	chr1_GL383518v1_alt:102420-102522	3	-	102420	102420	8553170	1	102,	0,
#Deleted in new
chr1_GL383518v1_alt	111873	118792	chr1_GL383518v1_alt:111873-118792	7	+	111873	111873	16724991	11	550,139,130,125,166,166,235,184,187,79,79,	0,1035,1263,4320,4534,4840,5305,5986,6234,6546,6840,
#Deleted in new
chr1_GL383518v1_alt	121425	145049	chr1_GL383518v1_alt:121425-145049	3	-	126877	145048	789624	10	5586,118,111,203,316,171,132,132,130,336,	0,7006,7297,8525,11548,12647,13315,14066,14881,23288,
#Deleted in new
chr1_GL383518v1_alt	168806	170115	chr1_GL383518v1_alt:168806-170115	7	-	168806	168806	16724991	1	1309,	0,
#Deleted in new
chr1_GL383519v1_alt	797	3290	chr1_GL383519v1_alt:797-3290	7	-	797	797	16724991	7	240,173,134,142,187,88,27,	0,475,858,1323,1582,2010,2466,
#Deleted in new
chr1_GL383519v1_alt	15376	18726	chr1_GL383519v1_alt:15376-18726	7	+	15376	15376	16724991	7	34,80,93,183,77,155,215,	0,166,1777,2035,2344,2888,3135,
#Deleted in new
chr1_GL383519v1_alt	19395	23904	chr1_GL383519v1_alt:19395-23904	7	-	19395	19395	16724991	11	106,117,109,225,240,173,134,142,187,92,27,	0,200,686,1195,2016,2491,2874,3339,3598,4022,4482,
#Deleted in new
chr1_GL383519v1_alt	35997	39348	chr1_GL383519v1_alt:35997-39348	7	+	35997	35997	16724991	7	35,80,93,183,77,155,215,	0,167,1778,2036,2345,2889,3136,
#Deleted in new
chr1_GL383519v1_alt	39470	46298	chr1_GL383519v1_alt:39470-46298	1	-	40017	46135	789624	10	653,117,164,225,238,173,134,192,88,190,	0,747,1233,1797,2893,3686,4069,5438,6182,6638,
#Deleted in new
chr1_GL383519v1_alt	39470	49885	chr1_GL383519v1_alt:39470-49885	3	-	40017	44954	789624	10	653,117,164,225,238,173,134,147,192,357,	0,747,1233,1797,2893,3686,4069,5168,5438,10058,
#Deleted in new
chr1_GL383519v1_alt	39474	46257	chr1_GL383519v1_alt:39474-46257	1	-	40017	46135	789624	11	649,117,164,225,238,173,134,147,192,88,149,	0,743,1229,1793,2889,3682,4065,5164,5434,6178,6634,
#Deleted in new
chr1_GL383519v1_alt	39474	49693	chr1_GL383519v1_alt:39474-49693	1	-	40017	46135	789624	12	649,117,164,225,238,173,134,147,192,88,95,165,	0,743,1229,1793,2889,3682,4065,5164,5434,6178,6634,10054,
#Deleted in new
chr1_GL383519v1_alt	39475	40858	chr1_GL383519v1_alt:39475-40858	0	-	39475	39475	8553170	2	369,190,	0,1193,
#Deleted in new
chr1_GL383519v1_alt	39954	45722	chr1_GL383519v1_alt:39954-45722	0	-	39954	39954	8553170	4	101,377,192,70,	0,4454,4954,5698,
#Deleted in new
chr1_GL383519v1_alt	39983	41482	chr1_GL383519v1_alt:39983-41482	0	-	39983	39983	8553170	3	140,650,215,	0,234,1284,
#Deleted in new
chr1_GL383519v1_alt	40038	46254	chr1_GL383519v1_alt:40038-46254	0	-	40038	40038	8553170	7	85,117,164,44,105,88,146,	0,179,665,1229,4957,5614,6070,
#Deleted in new
chr1_GL383519v1_alt	41204	43732	chr1_GL383519v1_alt:41204-43732	0	-	41204	41204	8553170	4	288,238,173,193,	0,1159,1952,2335,
#Deleted in new
chr1_GL383519v1_alt	41418	44985	chr1_GL383519v1_alt:41418-44985	0	-	41418	41418	8553170	5	74,238,173,134,77,	0,945,1738,2121,3490,
#Deleted in new
chr1_GL383519v1_alt	42363	44985	chr1_GL383519v1_alt:42363-44985	0	-	42363	42363	8553170	5	238,173,134,75,77,	0,793,1176,1455,2545,
#Deleted in new
chr1_GL383519v1_alt	42954	43914	chr1_GL383519v1_alt:42954-43914	0	-	42954	42954	8553170	2	375,375,	0,585,
#Deleted in new
chr1_GL383519v1_alt	43235	49659	chr1_GL383519v1_alt:43235-49659	0	-	43235	43235	8553170	8	94,134,147,192,88,95,139,131,	0,304,1403,1673,2417,2873,5882,6293,
#Deleted in new
chr1_GL383519v1_alt	43586	49645	chr1_GL383519v1_alt:43586-49645	0	-	43586	43586	8553170	7	87,147,192,88,95,136,117,	0,1052,1322,2066,2522,5531,5942,
#Deleted in new
chr1_GL383519v1_alt	44657	49629	chr1_GL383519v1_alt:44657-49629	0	-	44657	44657	8553170	6	128,77,88,95,136,101,	0,251,995,1451,4460,4871,
#Deleted in new
chr1_GL383519v1_alt	44982	46266	chr1_GL383519v1_alt:44982-46266	0	-	44982	44982	8553170	4	118,123,88,158,	0,217,670,1126,
#Deleted in new
chr1_GL383519v1_alt	52227	59983	chr1_GL383519v1_alt:52227-59983	1	-	52804	59900	789624	9	751,254,69,546,70,100,173,108,308,	0,845,1200,3071,3890,4297,4528,6420,7448,
#Deleted in new
chr1_GL383519v1_alt	52231	60370	chr1_GL383519v1_alt:52231-60370	1	-	52418	59900	789624	5	321,89,173,108,695,	0,4304,4524,6416,7444,
#Deleted in new
chr1_GL383519v1_alt	52239	56831	chr1_GL383519v1_alt:52239-56831	0	-	52239	52239	8553170	7	739,254,69,654,70,100,76,	0,833,1188,3059,3878,4285,4516,
#Deleted in new
chr1_GL383519v1_alt	52239	59991	chr1_GL383519v1_alt:52239-59991	1	-	52804	59900	789624	11	739,254,69,546,70,100,176,108,120,111,316,	0,833,1188,3059,3878,4285,4516,6408,6642,6867,7436,
#Deleted in new
chr1_GL383519v1_alt	52239	60410	chr1_GL383519v1_alt:52239-60410	3	-	52804	59900	789624	12	739,254,69,546,70,100,173,108,120,111,57,735,	0,833,1188,3059,3878,4285,4516,6408,6642,6867,7183,7436,
#Deleted in new
chr1_GL383519v1_alt	52449	60214	chr1_GL383519v1_alt:52449-60214	0	-	53293	59900	789624	5	529,254,69,108,539,	0,623,978,6198,7226,
#Deleted in new
chr1_GL383519v1_alt	53096	59931	chr1_GL383519v1_alt:53096-59931	0	-	53096	59900	789624	7	230,69,70,100,173,108,256,	0,331,3021,3428,3659,5551,6579,
#Deleted in new
chr1_GL383519v1_alt	55610	57091	chr1_GL383519v1_alt:55610-57091	0	-	55610	55610	8553170	3	234,70,567,	0,507,914,
#Deleted in new
chr1_GL383519v1_alt	55716	59987	chr1_GL383519v1_alt:55716-59987	0	-	55716	55716	8553170	7	128,70,100,173,108,57,312,	0,401,808,1039,2931,3706,3959,
#Deleted in new
chr1_GL383519v1_alt	57771	60506	chr1_GL383519v1_alt:57771-60506	0	-	57771	57771	8553170	5	984,120,111,57,831,	0,1110,1335,1651,1904,
#Deleted in new
chr1_GL383519v1_alt	61001	67282	chr1_GL383519v1_alt:61001-67282	1	-	61295	67174	789624	9	441,118,102,160,129,121,123,78,174,	0,695,1306,1519,2847,4351,4558,5678,6107,
#Deleted in new
chr1_GL383519v1_alt	61001	63938	chr1_GL383519v1_alt:61001-63938	0	-	61001	61001	8553170	3	441,118,90,	0,695,2847,
#Deleted in new
chr1_GL383519v1_alt	61003	67453	chr1_GL383519v1_alt:61003-67453	3	-	61295	67174	789624	8	439,118,102,160,129,121,123,345,	0,693,1304,1517,2845,4349,4556,6105,
#Deleted in new
chr1_GL383519v1_alt	61029	65473	chr1_GL383519v1_alt:61029-65473	0	-	61029	61029	8553170	6	413,118,89,160,129,121,	0,667,1291,1491,2819,4323,
#Deleted in new
chr1_GL383519v1_alt	61263	65675	chr1_GL383519v1_alt:61263-65675	0	-	61263	61263	8553170	6	179,118,102,160,129,323,	0,433,1044,1257,2585,4089,
#Deleted in new
chr1_GL383519v1_alt	62307	67250	chr1_GL383519v1_alt:62307-67250	0	-	62307	62307	8553170	6	102,160,67,121,123,142,	0,213,1541,3045,3252,4801,
#Deleted in new
chr1_GL383519v1_alt	62308	66891	chr1_GL383519v1_alt:62308-66891	0	-	62308	62308	8553170	6	101,160,102,121,123,212,	0,212,1505,3044,3251,4371,
#Deleted in new
chr1_GL383519v1_alt	63848	67362	chr1_GL383519v1_alt:63848-67362	0	-	63848	63848	8553170	5	129,121,123,78,394,	0,1504,1711,2831,3120,
#Deleted in new
chr1_GL383519v1_alt	66249	67352	chr1_GL383519v1_alt:66249-67352	0	-	66249	66249	8553170	2	508,244,	0,859,
#Deleted in new
chr1_GL383519v1_alt	67890	78310	chr1_GL383519v1_alt:67890-78310	1	-	68240	76000	0	13	533,91,80,83,130,95,167,117,67,85,229,170,87,	0,1082,1353,1600,1777,2992,3861,5142,5425,5840,6620,7940,10333,
#Deleted in new
chr1_GL383519v1_alt	67890	78539	chr1_GL383519v1_alt:67890-78539	3	-	68240	76000	0	13	533,91,80,83,130,95,167,117,67,88,229,170,316,	0,1082,1353,1600,1777,2992,3861,5142,5425,5840,6620,7940,10333,
#Deleted in new
chr1_GL383519v1_alt	67896	78352	chr1_GL383519v1_alt:67896-78352	0	-	67896	67896	8553170	12	527,91,80,83,130,95,167,117,67,229,170,129,	0,1076,1347,1594,1771,2986,3855,5136,5419,6614,7934,10327,
#Deleted in new
chr1_GL383519v1_alt	67896	78505	chr1_GL383519v1_alt:67896-78505	1	-	68240	76000	789624	13	527,91,80,83,130,95,167,117,67,85,226,170,282,	0,1076,1347,1594,1771,2986,3855,5136,5419,5834,6614,7934,10327,
#Deleted in new
chr1_GL383519v1_alt	67902	74386	chr1_GL383519v1_alt:67902-74386	0	-	67902	67902	8553170	7	521,601,130,95,167,117,1071,	0,1070,1765,2980,3849,5130,5413,
#Deleted in new
chr1_GL383519v1_alt	73116	83514	chr1_GL383519v1_alt:73116-83514	0	-	73116	73116	8553170	6	33,67,88,226,170,117,	0,199,614,1394,2714,10281,
#Deleted in new
chr1_GL383519v1_alt	74188	75864	chr1_GL383519v1_alt:74188-75864	0	-	74188	74188	8553170	2	551,34,	0,1642,
#Deleted in new
chr1_GL383519v1_alt	82605	94871	chr1_GL383519v1_alt:82605-94871	3	+	82613	93486	789624	8	286,430,162,219,147,241,165,2068,	0,4828,6391,6956,7582,8141,9590,10198,
#Deleted in new
chr1_GL383519v1_alt	82721	94870	chr1_GL383519v1_alt:82721-94870	0	+	82721	82721	8553170	8	170,430,784,147,241,89,927,457,	0,4712,6275,7466,8025,9550,10082,11692,
#Deleted in new
chr1_GL383519v1_alt	87560	92926	chr1_GL383519v1_alt:87560-92926	0	+	87560	87560	8553170	5	303,219,147,165,123,	0,2001,2627,4635,5243,
#Deleted in new
chr1_GL383519v1_alt	93626	94541	chr1_GL383519v1_alt:93626-94541	0	+	93626	93626	8553170	2	404,128,	0,787,
#Deleted in new
chr1_GL383519v1_alt	94861	106024	chr1_GL383519v1_alt:94861-106024	1	-	95594	105910	0	11	840,182,167,153,151,271,187,132,92,183,121,	0,1917,3338,3599,4396,4643,5277,5598,5826,10259,11042,
#Deleted in new
chr1_GL383519v1_alt	95275	106457	chr1_GL383519v1_alt:95275-106457	3	-	95594	106418	0	11	426,182,167,153,151,271,187,132,92,183,139,	0,1503,2924,3185,3982,4229,4863,5184,5412,9845,11043,
#Deleted in new
chr1_GL383519v1_alt	100157	105979	chr1_GL383519v1_alt:100157-105979	0	-	105167	105979	789624	5	168,132,92,112,76,	0,302,530,4963,5746,
#Deleted in new
chr1_GL383520v2_alt	164627	182350	chr1_GL383520v2_alt:164627-182350	3	-	170534	182055	789624	5	343,101,46,117,71,	0,5858,13456,17346,17652,
#Deleted in new
chr1_GL383520v2_alt	164627	182140	chr1_GL383520v2_alt:164627-182140	1	-	164796	182055	789624	3	343,101,167,	0,5858,17346,
#Deleted in new
chr1_GL383520v2_alt	164629	182350	chr1_GL383520v2_alt:164629-182350	1	-	164796	182055	789624	4	341,101,117,71,	0,5856,17344,17650,
#Deleted in new
chr1_GL383520v2_alt	164746	182079	chr1_GL383520v2_alt:164746-182079	1	-	164796	182055	789624	4	224,101,18,106,	0,5739,13337,17227,
#Deleted in new
chr1_GL383520v2_alt	239128	240273	chr1_GL383520v2_alt:239128-240273	3	-	239128	239128	8553170	2	260,103,	0,1042,
#Deleted in new
chr1_GL383520v2_alt	280075	349562	chr1_GL383520v2_alt:280075-349562	0	+	280679	349562	789624	7	28,116,27,75,27,219,25,	0,555,53676,64627,65801,68063,69462,
#Deleted in new
chr1_GL383520v2_alt	280423	363881	chr1_GL383520v2_alt:280423-363881	0	+	280679	363881	789624	13	119,116,27,141,75,27,219,129,138,120,159,209,61,	0,207,53328,60545,64279,65453,67715,69114,70668,73934,77663,79075,83397,
#Deleted in new
chr1_GL383520v2_alt	280444	363881	chr1_GL383520v2_alt:280444-363881	0	+	280679	363881	0	15	98,116,27,198,141,144,75,27,219,129,138,120,159,209,61,	0,186,53307,57672,60524,63347,64258,65432,67694,69093,70647,73913,77642,79054,83376,
#Deleted in new
chr1_GL383520v2_alt	280477	345279	chr1_GL383520v2_alt:280477-345279	0	+	280477	280477	8553170	5	65,116,27,141,577,	0,153,53274,60491,64225,
#Deleted in new
chr1_GL383520v2_alt	280499	363881	chr1_GL383520v2_alt:280499-363881	0	+	280679	363881	0	12	43,116,27,75,27,219,129,138,120,159,209,61,	0,131,53252,64203,65377,67639,69038,70592,73858,77587,78999,83321,
#Deleted in new
chr1_GL383520v2_alt	280499	363881	chr1_GL383520v2_alt:280499-363881	0	+	280679	363881	789624	14	43,116,27,141,144,75,27,219,129,138,120,159,209,61,	0,131,53252,60469,63292,64203,65377,67639,69038,70592,73858,77587,78999,83321,
#Deleted in new
chr1_GL383520v2_alt	280501	334611	chr1_GL383520v2_alt:280501-334611	1	+	280679	333789	789624	3	41,116,860,	0,129,53250,
#Deleted in new
chr1_GL383520v2_alt	280501	336576	chr1_GL383520v2_alt:280501-336576	3	+	280679	335586	789624	4	41,116,27,1154,	0,129,53250,54921,
#Deleted in new
chr1_GL383520v2_alt	280508	363881	chr1_GL383520v2_alt:280508-363881	0	+	280679	363881	789624	14	34,116,27,198,141,75,27,219,129,138,120,159,209,61,	0,122,53243,57608,60460,64194,65368,67630,69029,70583,73849,77578,78990,83312,
#Deleted in new
chr1_GL383520v2_alt	280566	341025	chr1_GL383520v2_alt:280566-341025	0	+	280679	341025	789624	4	180,27,198,57,	0,53185,57550,60402,
#Deleted in new
chr1_GL383520v2_alt	280692	344751	chr1_GL383520v2_alt:280692-344751	0	+	280692	280692	8553170	4	47,27,141,49,	0,53059,60276,64010,
#Deleted in new
chr1_GL383520v2_alt	280692	344751	chr1_GL383520v2_alt:280692-344751	0	+	280692	343851	789624	5	47,27,141,144,49,	0,53059,60276,63099,64010,
#Deleted in new
chr1_GL383520v2_alt	298957	308466	chr1_GL383520v2_alt:298957-308466	3	-	298957	298957	8553170	3	269,84,63,	0,3070,9446,
#Deleted in new
chr1_GL383520v2_alt	320538	321438	chr1_GL383520v2_alt:320538-321438	7	-	320538	320538	16724991	2	87,466,	0,434,
#Deleted in new
chr1_GL383520v2_alt	338285	341551	chr1_GL383520v2_alt:338285-341551	0	+	338285	338285	8553170	2	29,583,	0,2683,
#Deleted in new
chr1_GL383520v2_alt	354194	359704	chr1_GL383520v2_alt:354194-359704	0	+	354194	354194	8553170	3	283,159,206,	0,3892,5304,
#Deleted in new
chr1_KI270711v1_random	4611	24650	chr1_KI270711v1_random:4611-24650	1	-	6126	21127	8553170	16	1759,112,173,52,173,52,173,52,164,52,206,73,215,103,210,159,	0,2379,3205,3992,4753,5528,6299,7095,8189,12259,13615,14285,15395,16445,18321,19880,
#Deleted in new
chr1_KI270711v1_random	6100	29626	chr1_KI270711v1_random:6100-29626	1	-	6126	29453	8553170	16	270,112,173,52,173,52,173,52,164,52,206,73,215,103,210,36,	0,890,1716,2503,3264,4039,4810,5606,6700,10770,12126,12796,20190,21236,23178,23490,
#Deleted in new
chr1_KI270711v1_random	6100	29626	chr1_KI270711v1_random:6100-29626	3	-	9513	23107	8553170	13	270,112,173,52,173,52,52,206,73,215,103,181,167,	0,890,1716,2503,3264,5606,10770,12126,12796,13906,14956,16832,23359,
#Deleted in new
chr1_KI270711v1_random	6101	29626	chr1_KI270711v1_random:6101-29626	1	-	7096	29453	8553170	21	269,112,114,55,52,173,52,173,52,164,52,206,73,215,103,210,212,73,215,53,293,	0,889,1715,1833,2502,3263,4038,4809,5605,6699,10769,12125,12795,13905,14955,16831,18390,19065,20189,23177,23232,
#Deleted in new
chr1_KI270713v1_random	21860	22024	chr1_KI270713v1_random:21860-22024	3	-	21860	21860	8553170	1	164,	0,
#Deleted in new
chr1_KI270713v1_random	30436	30580	chr1_KI270713v1_random:30436-30580	3	-	30436	30436	8553170	1	144,	0,
#Deleted in new
chr1_KI270713v1_random	31697	32528	chr1_KI270713v1_random:31697-32528	3	-	31841	32372	789624	1	831,	0,
#Deleted in new
chr1_KI270713v1_random	35406	35916	chr1_KI270713v1_random:35406-35916	3	+	35406	35916	789624	1	510,	0,
#Deleted in new
chr1_KI270759v1_alt	47981	66023	chr1_KI270759v1_alt:47981-66023	0	+	47981	47981	8553170	4	239,534,119,299,	0,13156,16898,17743,
#Deleted in new
chr1_KI270759v1_alt	61135	407457	chr1_KI270759v1_alt:61135-407457	3	+	61135	400631	789624	13	536,167,184,207,94,263,184,160,163,3403,203,151,6975,	0,52747,173935,235745,240819,242434,244961,279289,321122,322294,334995,335776,339347,
#Deleted in new
chr1_KI270759v1_alt	205305	384618	chr1_KI270759v1_alt:205305-384618	0	+	205305	205305	8553170	9	127,184,207,94,263,184,160,163,1189,	0,29765,91575,96649,98264,100791,135119,176952,178124,
#Deleted in new
chr1_KI270760v1_alt	54504	61341	chr1_KI270760v1_alt:54504-61341	3	-	54504	54504	8553170	3	252,278,44,	0,1884,6793,
#Deleted in new
chr1_KI270760v1_alt	62201	64565	chr1_KI270760v1_alt:62201-64565	3	-	62201	62201	8553170	3	450,156,186,	0,1649,2178,
#Deleted in new
chr1_KI270760v1_alt	68751	74035	chr1_KI270760v1_alt:68751-74035	3	+	68751	68751	8553170	3	49,107,325,	0,1022,4959,
#Deleted in new
chr1_KI270761v1_alt	9554	10601	chr1_KI270761v1_alt:9554-10601	3	+	9554	10601	789624	1	1047,	0,
#Deleted in new
chr1_KI270761v1_alt	35923	36850	chr1_KI270761v1_alt:35923-36850	3	+	35923	36850	789624	1	927,	0,
#Deleted in new
chr1_KI270761v1_alt	60034	61144	chr1_KI270761v1_alt:60034-61144	3	+	60034	61144	789624	1	1110,	0,
#Deleted in new
chr1_KI270761v1_alt	95246	96173	chr1_KI270761v1_alt:95246-96173	3	+	95246	96173	789624	1	927,	0,
#Deleted in new
chr1_KI270761v1_alt	106815	107869	chr1_KI270761v1_alt:106815-107869	3	+	106837	107812	789624	1	1054,	0,
#Deleted in new
chr1_KI270761v1_alt	127365	128373	chr1_KI270761v1_alt:127365-128373	3	+	127390	128347	789624	1	1008,	0,
#Deleted in new
chr1_KI270761v1_alt	142603	143637	chr1_KI270761v1_alt:142603-143637	3	+	142628	143576	789624	1	1034,	0,
#Deleted in new
chr1_KI270762v1_alt	18648	56716	chr1_KI270762v1_alt:18648-56716	3	+	18809	54817	789624	22	204,147,245,129,171,94,204,121,172,108,144,93,83,98,183,108,125,85,147,80,799,1910,	0,11017,12275,12725,16989,19448,19714,20139,21748,22301,23733,27397,28029,29148,29369,30043,31064,31285,31625,32182,34653,36158,
#Deleted in new
chr1_KI270762v1_alt	27504	56715	chr1_KI270762v1_alt:27504-56715	1	+	27778	56403	789624	22	398,147,244,130,171,94,204,121,172,108,144,93,83,98,183,108,125,85,147,80,298,1604,	0,2161,3419,3868,8133,10592,10858,11283,12892,13445,14877,18541,19173,20292,20513,21187,22208,22429,22769,23326,25797,27607,
#Deleted in new
chr1_KI270762v1_alt	27504	56715	chr1_KI270762v1_alt:27504-56715	1	+	27778	56403	789624	22	398,147,245,129,171,94,204,121,172,108,144,93,83,98,183,108,125,85,147,80,298,1604,	0,2161,3419,3869,8133,10592,10858,11283,12892,13445,14877,18541,19173,20292,20513,21187,22208,22429,22769,23326,25797,27607,
#Deleted in new
chr1_KI270762v1_alt	30279	56720	chr1_KI270762v1_alt:30279-56720	0	+	30279	30279	8553170	19	889,129,171,94,204,121,172,108,144,93,83,98,183,108,125,85,147,80,3419,	0,1094,5358,7817,8083,8508,10117,10670,12102,15766,16398,17517,17738,18412,19433,19654,19994,20551,23022,
#Deleted in new
chr1_KI270762v1_alt	43489	44448	chr1_KI270762v1_alt:43489-44448	3	-	43489	43489	8553170	2	297,158,	0,801,
#Deleted in new
chr1_KI270762v1_alt	44626	45669	chr1_KI270762v1_alt:44626-45669	3	-	44626	44626	8553170	2	417,97,	0,946,
#Deleted in new
chr1_KI270762v1_alt	48971	56718	chr1_KI270762v1_alt:48971-56718	0	+	48971	48971	8553170	4	866,85,147,5888,	0,962,1302,1859,
#Deleted in new
chr1_KI270762v1_alt	49836	56718	chr1_KI270762v1_alt:49836-56718	0	+	49836	49836	8553170	6	182,147,80,298,27,1607,	0,437,994,3465,4970,5275,
#Deleted in new
chr1_KI270762v1_alt	59722	77790	chr1_KI270762v1_alt:59722-77790	3	-	60036	77777	789624	19	528,69,101,105,50,56,152,88,113,156,101,82,182,154,93,184,215,83,137,	0,1329,1524,2145,2805,3095,4355,5469,5821,7029,9631,9983,10610,11268,11789,12190,12568,13185,17931,
#Deleted in new
chr1_KI270762v1_alt	59726	77786	chr1_KI270762v1_alt:59726-77786	1	-	60036	77777	789624	19	524,69,101,105,50,56,152,88,113,156,101,82,182,154,93,111,171,83,133,	0,1325,1520,2141,2801,3091,4351,5465,5817,7025,9627,9979,10606,11264,11785,12186,12608,13181,17927,
#Deleted in new
chr1_KI270762v1_alt	59984	72091	chr1_KI270762v1_alt:59984-72091	0	-	61923	72091	789624	16	266,69,101,71,50,56,152,88,113,156,101,82,182,154,93,179,	0,1067,1262,1883,2543,2833,4093,5207,5559,6767,9369,9721,10348,11006,11527,11928,
#Deleted in new
chr1_KI270762v1_alt	60982	65593	chr1_KI270762v1_alt:60982-65593	0	-	61923	65593	789624	8	138,101,71,50,56,152,88,50,	0,264,885,1545,1835,3095,4209,4561,
#Deleted in new
chr1_KI270762v1_alt	61482	64203	chr1_KI270762v1_alt:61482-64203	0	-	61482	61482	8553170	4	490,50,56,126,	0,1045,1335,2595,
#Deleted in new
chr1_KI270762v1_alt	63595	65275	chr1_KI270762v1_alt:63595-65275	0	-	63595	63595	8553170	2	634,84,	0,1596,
#Deleted in new
chr1_KI270762v1_alt	65602	67127	chr1_KI270762v1_alt:65602-67127	0	-	65602	65602	8553170	2	54,376,	0,1149,
#Deleted in new
chr1_KI270762v1_alt	65622	70485	chr1_KI270762v1_alt:65622-70485	0	-	66510	70485	789624	6	34,144,156,101,82,153,	0,825,1129,3731,4083,4710,
#Deleted in new
chr1_KI270762v1_alt	70393	77765	chr1_KI270762v1_alt:70393-77765	0	-	72491	77765	789624	6	121,154,93,184,215,112,	0,597,1118,1519,1897,7260,
#Deleted in new
chr1_KI270762v1_alt	72029	77786	chr1_KI270762v1_alt:72029-77786	0	-	72799	77777	789624	3	67,841,133,	0,261,5624,
#Deleted in new
chr1_KI270762v1_alt	72450	77377	chr1_KI270762v1_alt:72450-77377	0	-	72450	72450	8553170	3	55,83,587,	0,457,4340,
#Deleted in new
chr1_KI270762v1_alt	72556	77787	chr1_KI270762v1_alt:72556-77787	0	-	72556	72556	8553170	2	434,134,	0,5097,
#Deleted in new
chr1_KI270762v1_alt	79934	81435	chr1_KI270762v1_alt:79934-81435	3	-	80658	81354	789624	3	1005,166,135,	0,1101,1366,
#Deleted in new
chr1_KI270762v1_alt	79934	81435	chr1_KI270762v1_alt:79934-81435	0	-	79934	79934	8553170	1	1501,	0,
#Deleted in new
chr1_KI270762v1_alt	97654	98650	chr1_KI270762v1_alt:97654-98650	3	+	97654	97654	8553170	1	996,	0,
#Deleted in new
chr1_KI270762v1_alt	101109	105435	chr1_KI270762v1_alt:101109-105435	0	-	101109	101109	8553170	2	355,145,	0,4181,
#Deleted in new
chr1_KI270762v1_alt	101109	108201	chr1_KI270762v1_alt:101109-108201	3	-	101109	101109	789624	6	200,929,189,196,1973,35,	0,1855,3706,4181,4804,7057,
#Deleted in new
chr1_KI270762v1_alt	101109	103296	chr1_KI270762v1_alt:101109-103296	1	-	101109	101109	8553170	3	355,159,1115,	0,653,1072,
#Deleted in new
chr1_KI270762v1_alt	101263	102788	chr1_KI270762v1_alt:101263-102788	0	-	101263	101263	8553170	2	201,607,	0,918,
#Deleted in new
chr1_KI270762v1_alt	101472	105340	chr1_KI270762v1_alt:101472-105340	1	-	101472	101472	8553170	2	449,3159,	0,709,
#Deleted in new
chr1_KI270762v1_alt	105430	108221	chr1_KI270762v1_alt:105430-108221	1	-	105430	105430	8553170	4	56,189,269,55,	0,1440,2187,2736,
#Deleted in new
chr1_KI270762v1_alt	106828	111904	chr1_KI270762v1_alt:106828-111904	0	+	107854	111904	789624	6	29,149,109,126,156,91,	0,946,2087,2704,4184,4985,
#Deleted in new
chr1_KI270762v1_alt	106980	113005	chr1_KI270762v1_alt:106980-113005	0	+	107854	113005	789624	7	60,149,109,126,156,91,143,	0,794,1935,2552,4032,4833,5882,
#Deleted in new
chr1_KI270762v1_alt	106991	113005	chr1_KI270762v1_alt:106991-113005	0	+	107854	113005	789624	7	451,149,109,126,156,91,143,	0,783,1924,2541,4021,4822,5871,
#Deleted in new
chr1_KI270762v1_alt	107169	113005	chr1_KI270762v1_alt:107169-113005	0	+	107854	113005	789624	7	53,149,109,126,156,91,143,	0,605,1746,2363,3843,4644,5693,
#Deleted in new
chr1_KI270762v1_alt	107411	112908	chr1_KI270762v1_alt:107411-112908	1	+	107854	112714	789624	7	40,149,109,126,156,91,225,	0,363,1504,2121,3601,4402,5272,
#Deleted in new
chr1_KI270762v1_alt	107555	115019	chr1_KI270762v1_alt:107555-115019	3	+	107854	114463	0	8	368,109,126,156,91,143,32,682,	0,1360,1977,3457,4258,5307,6499,6782,
#Deleted in new
chr1_KI270762v1_alt	107575	115019	chr1_KI270762v1_alt:107575-115019	0	+	107575	107575	8553170	6	70,627,91,143,32,682,	0,2966,4238,5287,6479,6762,
#Deleted in new
chr1_KI270762v1_alt	107594	110346	chr1_KI270762v1_alt:107594-110346	0	+	107594	107594	8553170	4	329,109,126,276,	0,1321,1938,2476,
#Deleted in new
chr1_KI270762v1_alt	107595	110052	chr1_KI270762v1_alt:107595-110052	0	+	107595	107595	8553170	3	328,109,520,	0,1320,1937,
#Deleted in new
chr1_KI270762v1_alt	107746	112725	chr1_KI270762v1_alt:107746-112725	0	+	107746	107746	8553170	5	177,109,126,156,912,	0,1169,1786,3266,4067,
#Deleted in new
chr1_KI270762v1_alt	107760	114939	chr1_KI270762v1_alt:107760-114939	0	+	107760	107760	8553170	5	163,109,1636,91,2256,	0,1155,1772,4053,4923,
#Deleted in new
chr1_KI270762v1_alt	109002	115016	chr1_KI270762v1_alt:109002-115016	0	+	109002	109002	8553170	6	22,1636,91,143,32,679,	0,530,2811,3860,5052,5335,
#Deleted in new
chr1_KI270762v1_alt	110769	112732	chr1_KI270762v1_alt:110769-112732	0	+	110769	110769	8553170	3	399,91,49,	0,1044,1914,
#Deleted in new
chr1_KI270762v1_alt	111743	114694	chr1_KI270762v1_alt:111743-114694	0	+	111743	111743	8553170	4	161,322,32,357,	0,940,2311,2594,
#Deleted in new
chr1_KI270762v1_alt	111871	116812	chr1_KI270762v1_alt:111871-116812	0	+	111871	114058	789624	4	33,39,32,570,	0,1095,2183,4371,
#Deleted in new
chr1_KI270762v1_alt	112990	114642	chr1_KI270762v1_alt:112990-114642	0	+	112990	112990	8553170	3	157,32,305,	0,1064,1347,
#Deleted in new
chr1_KI270762v1_alt	117599	121078	chr1_KI270762v1_alt:117599-121078	3	+	117599	117599	8553170	3	196,189,912,	0,1456,2567,
#Deleted in new
chr1_KI270762v1_alt	132749	135724	chr1_KI270762v1_alt:132749-135724	3	+	132749	132749	789624	3	91,126,410,	0,1810,2565,
#Deleted in new
chr1_KI270762v1_alt	137680	140822	chr1_KI270762v1_alt:137680-140822	0	+	137680	137680	789624	7	101,205,52,64,76,119,223,	0,600,1250,1899,2059,2431,2919,
#Deleted in new
chr1_KI270762v1_alt	137729	140848	chr1_KI270762v1_alt:137729-140848	0	+	137729	137729	8553170	7	52,205,52,64,76,87,249,	0,551,1201,1850,2010,2414,2870,
#Deleted in new
chr1_KI270762v1_alt	137939	142657	chr1_KI270762v1_alt:137939-142657	1	+	137985	140617	789624	7	199,205,52,118,76,119,2058,	0,341,991,1586,1800,2172,2660,
#Deleted in new
chr1_KI270762v1_alt	137939	142657	chr1_KI270762v1_alt:137939-142657	1	+	137985	140617	789624	6	199,205,52,64,87,2058,	0,341,991,1640,2204,2660,
#Deleted in new
chr1_KI270762v1_alt	137964	142658	chr1_KI270762v1_alt:137964-142658	1	+	137985	140617	789624	7	174,205,52,64,76,119,2059,	0,316,966,1615,1775,2147,2635,
#Deleted in new
chr1_KI270762v1_alt	137969	142657	chr1_KI270762v1_alt:137969-142657	1	+	137985	140604	789624	7	169,205,52,118,76,87,2058,	0,311,961,1556,1770,2174,2630,
#Deleted in new
chr1_KI270762v1_alt	137985	141137	chr1_KI270762v1_alt:137985-141137	3	+	137985	140617	789624	6	153,205,52,64,84,538,	0,295,945,1594,2161,2614,
#Deleted in new
chr1_KI270762v1_alt	137987	142653	chr1_KI270762v1_alt:137987-142653	0	+	137987	140604	789624	7	151,205,52,64,76,87,2054,	0,293,943,1592,1752,2156,2612,
#Deleted in new
chr1_KI270762v1_alt	138006	140995	chr1_KI270762v1_alt:138006-140995	0	+	138006	138006	8553170	7	57,182,52,64,76,119,396,	0,297,924,1573,1733,2105,2593,
#Deleted in new
chr1_KI270762v1_alt	138022	140167	chr1_KI270762v1_alt:138022-140167	0	+	138022	140167	789624	6	116,205,52,64,96,56,	0,258,908,1557,1697,2089,
#Deleted in new
chr1_KI270762v1_alt	138066	140182	chr1_KI270762v1_alt:138066-140182	0	+	138066	140182	789624	5	72,205,52,64,71,	0,214,864,1513,2045,
#Deleted in new
chr1_KI270762v1_alt	138231	140703	chr1_KI270762v1_alt:138231-140703	0	+	138231	138231	8553170	6	254,52,64,96,119,104,	0,699,1348,1488,1880,2368,
#Deleted in new
chr1_KI270762v1_alt	138267	142659	chr1_KI270762v1_alt:138267-142659	0	+	138267	138267	789624	6	218,52,64,96,87,2060,	0,663,1312,1452,1876,2332,
#Deleted in new
chr1_KI270762v1_alt	138274	139935	chr1_KI270762v1_alt:138274-139935	0	+	138274	138274	8553170	3	211,52,356,	0,656,1305,
#Deleted in new
chr1_KI270762v1_alt	139783	142658	chr1_KI270762v1_alt:139783-142658	0	+	139783	139783	8553170	2	447,2059,	0,816,
#Deleted in new
chr1_KI270762v1_alt	141828	143868	chr1_KI270762v1_alt:141828-143868	0	-	142179	143868	789624	3	451,77,24,	0,918,2016,
#Deleted in new
chr1_KI270762v1_alt	141832	184177	chr1_KI270762v1_alt:141832-184177	3	-	142179	180674	789624	24	447,77,96,66,134,120,59,104,84,99,129,94,137,90,135,66,119,96,81,162,60,78,191,125,	0,914,1289,2012,2190,3171,3742,4147,4633,5366,5918,7564,8011,13241,13504,14915,15605,16331,18696,19027,20638,21484,38688,42220,
#Deleted in new
chr1_KI270762v1_alt	142115	180684	chr1_KI270762v1_alt:142115-180684	1	-	142179	180674	789624	19	164,77,96,66,134,120,59,104,84,99,129,94,137,90,26,162,60,78,164,	0,631,1006,1729,1907,2888,3459,3864,4350,5083,5635,7281,7728,12958,18468,18744,20355,21201,38405,
#Deleted in new
chr1_KI270762v1_alt	142115	180684	chr1_KI270762v1_alt:142115-180684	0	-	145063	180674	789624	23	164,77,96,66,134,149,59,104,84,99,129,94,137,90,135,66,119,96,81,162,60,78,164,	0,631,1006,1729,1907,2888,3459,3864,4350,5083,5635,7281,7728,12958,13221,14632,15322,16048,18413,18744,20355,21201,38405,
#Deleted in new
chr1_KI270762v1_alt	142883	144069	chr1_KI270762v1_alt:142883-144069	0	-	142883	142883	8553170	2	334,225,	0,961,
#Deleted in new
chr1_KI270762v1_alt	142883	144058	chr1_KI270762v1_alt:142883-144058	0	-	142883	142883	8553170	2	334,148,	0,1027,
#Deleted in new
chr1_KI270762v1_alt	143844	145263	chr1_KI270762v1_alt:143844-145263	0	-	143844	143844	8553170	3	66,134,260,	0,178,1159,
#Deleted in new
chr1_KI270762v1_alt	157470	162591	chr1_KI270762v1_alt:157470-162591	0	-	157470	157470	8553170	5	86,96,81,162,121,	0,693,3058,3389,5000,
#Deleted in new
chr1_KI270762v1_alt	180947	184166	chr1_KI270762v1_alt:180947-184166	0	-	180947	180947	8553170	2	437,114,	0,3105,
#Deleted in new
chr1_KI270762v1_alt	183754	187405	chr1_KI270762v1_alt:183754-187405	3	+	183754	183754	8553170	2	108,265,	0,3386,
#Deleted in new
chr1_KI270762v1_alt	186760	349106	chr1_KI270762v1_alt:186760-349106	0	-	186760	186760	8553170	7	589,61,562,215,271,167,114,	0,4124,5358,8289,9318,160022,162232,
#Deleted in new
chr1_KI270762v1_alt	186760	190497	chr1_KI270762v1_alt:186760-190497	0	-	186760	186760	8553170	1	3737,	0,
#Deleted in new
chr1_KI270762v1_alt	192151	352889	chr1_KI270762v1_alt:192151-352889	3	-	192152	352765	789624	7	529,215,271,167,205,226,213,	0,2898,3927,154631,156841,158503,160525,
#Deleted in new
chr1_KI270763v1_alt	17952	19576	chr1_KI270763v1_alt:17952-19576	3	-	17952	17952	8553170	3	430,267,95,	0,567,1529,
#Deleted in new
chr1_KI270763v1_alt	41619	59933	chr1_KI270763v1_alt:41619-59933	3	-	41619	41619	8553170	3	405,105,114,	0,1760,18200,
#Deleted in new
chr1_KI270763v1_alt	43379	59977	chr1_KI270763v1_alt:43379-59977	1	-	43379	43379	8553170	3	105,212,158,	0,8009,16440,
#Deleted in new
chr1_KI270763v1_alt	68414	113852	chr1_KI270763v1_alt:68414-113852	3	-	68414	68414	789624	18	964,58,191,119,169,197,98,124,65,236,523,59,66,154,217,132,110,359,	0,1057,3171,4112,9766,10784,11318,13274,22681,25583,31403,33014,35224,35734,36172,39684,40883,45079,
#Deleted in new
chr1_KI270763v1_alt	93263	93367	chr1_KI270763v1_alt:93263-93367	3	-	93263	93263	8553170	1	104,	0,
#Deleted in new
chr1_KI270763v1_alt	136535	267159	chr1_KI270763v1_alt:136535-267159	1	-	138556	237388	0	19	2311,52,94,89,171,178,127,1833,127,150,164,477,135,163,59,79,90,146,12,	0,3821,4932,11715,15509,17858,31793,39856,45200,48269,61831,66590,74632,76090,76349,87458,97296,100748,130612,
#Deleted in new
chr1_KI270763v1_alt	136536	267429	chr1_KI270763v1_alt:136536-267429	3	-	138556	237388	0	19	2310,52,94,89,171,148,235,1833,127,150,164,477,135,163,59,79,90,146,282,	0,3820,4931,11714,15508,17887,31792,39855,45199,48268,61830,66589,74631,76089,76348,87457,97295,100747,130611,
#Deleted in new
chr1_KI270763v1_alt	136536	267159	chr1_KI270763v1_alt:136536-267159	1	-	138556	237388	0	20	2310,52,94,89,171,148,235,1833,127,150,294,164,477,135,163,59,79,90,146,12,	0,3820,4931,11714,15508,17887,31792,39855,45199,48268,61350,61830,66589,74631,76089,76348,87457,97295,100747,130611,
#Deleted in new
chr1_KI270763v1_alt	138452	175426	chr1_KI270763v1_alt:138452-175426	0	-	138452	138452	5263520	8	394,52,94,89,171,97,127,46,	0,1904,3015,9798,13592,16022,29876,36928,
#Deleted in new
chr1_KI270763v1_alt	223320	267339	chr1_KI270763v1_alt:223320-267339	0	-	223320	223320	8553170	4	752,90,146,192,	0,10511,13963,43827,
#Deleted in new
chr1_KI270763v1_alt	268163	512048	chr1_KI270763v1_alt:268163-512048	1	+	268281	511893	789624	18	185,153,86,114,126,129,65,189,139,153,135,117,143,128,109,132,127,185,	0,14049,14922,18487,30216,37035,48657,51933,60699,74484,84983,88159,122665,159646,161912,170371,232958,243700,
#Deleted in new
chr1_KI270763v1_alt	268169	330630	chr1_KI270763v1_alt:268169-330630	0	+	268169	268169	8553170	10	179,153,86,114,126,129,65,189,139,486,	0,14043,14916,18481,30210,37029,48651,51927,60693,61975,
#Deleted in new
chr1_KI270763v1_alt	268177	512198	chr1_KI270763v1_alt:268177-512198	3	+	298394	511893	789624	15	171,126,129,65,189,139,153,135,117,143,128,109,132,127,335,	0,30202,37021,48643,51919,60685,74470,84969,88145,122651,159632,161898,170357,232944,243686,
#Deleted in new
chr1_KI270763v1_alt	268211	512198	chr1_KI270763v1_alt:268211-512198	1	+	298394	511893	789624	14	137,126,65,189,139,153,135,117,143,128,109,132,127,335,	0,30168,48609,51885,60651,74436,84935,88111,122617,159598,161864,170323,232910,243652,
#Deleted in new
chr1_KI270763v1_alt	316820	512199	chr1_KI270763v1_alt:316820-512199	0	+	316820	511893	789624	10	65,189,139,153,135,117,143,132,127,336,	0,3276,12042,25827,36326,39502,74008,121714,184301,195043,
#Deleted in new
chr1_KI270763v1_alt	500340	855334	chr1_KI270763v1_alt:500340-855334	3	-	511850	855268	0	14	218,50,103,88,215,129,123,69,66,132,145,112,126,112,	0,11504,24091,57277,64496,75487,84693,125438,126863,149378,157660,176539,207358,354882,
#Deleted in new
chr1_KI270763v1_alt	511826	855682	chr1_KI270763v1_alt:511826-855682	1	-	511850	855268	0	14	68,103,88,215,129,123,69,66,132,145,112,126,158,41,	0,12605,45791,53010,64001,73207,113952,115377,137892,146174,165053,195872,343396,343815,
#Deleted in new
chr1_KI270763v1_alt	513870	855268	chr1_KI270763v1_alt:513870-855268	1	-	517356	855268	0	13	3572,103,88,215,129,123,69,66,132,145,112,126,46,	0,10561,43747,50966,61957,71163,111908,113333,135848,144130,163009,193828,341352,
#Deleted in new
chr1_KI270763v1_alt	658012	867542	chr1_KI270763v1_alt:658012-867542	0	-	658012	855268	789624	5	133,112,126,158,31,	0,18867,49686,197210,209499,
#Deleted in new
chr1_KI270763v1_alt	676879	826790	chr1_KI270763v1_alt:676879-826790	0	-	676879	676879	8553170	3	112,126,184,	0,30819,149727,
#Deleted in new
chr1_KI270763v1_alt	707698	830284	chr1_KI270763v1_alt:707698-830284	0	-	707698	707698	8553170	5	126,159,141,112,128,	0,39367,40016,112532,122458,
#Deleted in new
chr1_KI270763v1_alt	747771	826838	chr1_KI270763v1_alt:747771-826838	0	-	747771	747771	8553170	5	84,91,40,125,232,	0,3859,6104,53038,78835,
#Deleted in new
chr1_KI270763v1_alt	867845	868599	chr1_KI270763v1_alt:867845-868599	3	+	867845	867845	8553170	1	754,	0,
#Deleted in new
chr1_KI270765v1_alt	35154	35316	chr1_KI270765v1_alt:35154-35316	3	-	35154	35154	8553170	1	162,	0,
#Deleted in new
chr1_KI270765v1_alt	63073	63238	chr1_KI270765v1_alt:63073-63238	3	-	63073	63073	789624	1	165,	0,
#Deleted in new
chr1_KI270765v1_alt	71962	72126	chr1_KI270765v1_alt:71962-72126	3	-	71962	71962	8553170	1	164,	0,
#Deleted in new
chr1_KI270765v1_alt	72683	79322	chr1_KI270765v1_alt:72683-79322	3	-	72683	72683	8553170	2	331,215,	0,6424,
#Deleted in new
chr1_KI270765v1_alt	78895	80033	chr1_KI270765v1_alt:78895-80033	3	+	78895	78895	8553170	2	119,256,	0,882,
#Deleted in new
chr1_KI270765v1_alt	78942	80038	chr1_KI270765v1_alt:78942-80038	0	+	78942	78942	8553170	2	72,258,	0,838,
#Deleted in new
chr1_KI270765v1_alt	79595	80038	chr1_KI270765v1_alt:79595-80038	0	+	79595	79595	8553170	1	443,	0,
#Deleted in new
chr1_KI270765v1_alt	104159	104819	chr1_KI270765v1_alt:104159-104819	3	+	104234	104729	789624	1	660,	0,
#Deleted in new
chr1_KI270765v1_alt	138512	152618	chr1_KI270765v1_alt:138512-152618	3	-	138512	138512	8553170	6	46,77,19,119,183,90,	0,1345,2893,3551,13534,14016,
#Deleted in new
chr1_KI270765v1_alt	141880	144156	chr1_KI270765v1_alt:141880-144156	1	-	141880	141880	8553170	3	302,55,81,	0,1925,2195,
#Deleted in new
chr1_KI270765v1_alt	143807	152932	chr1_KI270765v1_alt:143807-152932	1	-	143807	143807	8553170	2	92,404,	0,8721,
#Deleted in new
chr1_KI270765v1_alt	171698	180608	chr1_KI270765v1_alt:171698-180608	3	+	171698	171698	8553170	4	120,117,102,76,	0,2887,8540,8834,
#Deleted in new
chr1_KI270766v1_alt	1358	4183	chr1_KI270766v1_alt:1358-4183	7	-	1358	1358	16724991	3	517,576,313,	0,1540,2512,
#Deleted in new
chr1_KI270766v1_alt	18520	23403	chr1_KI270766v1_alt:18520-23403	7	+	18520	18520	16724991	4	293,449,127,894,	0,679,2113,3989,
#Deleted in new
chr1_KI270766v1_alt	40715	43514	chr1_KI270766v1_alt:40715-43514	7	-	40715	40715	16724991	3	589,576,287,	0,1540,2512,
#Deleted in new
chr1_KI270766v1_alt	50093	51202	chr1_KI270766v1_alt:50093-51202	7	-	50093	50093	16724991	2	427,287,	0,822,
#Deleted in new
chr1_KI270766v1_alt	61038	62397	chr1_KI270766v1_alt:61038-62397	3	-	61061	61943	789624	2	1086,62,	0,1297,
#Deleted in new
chr1_KI270766v1_alt	74361	77160	chr1_KI270766v1_alt:74361-77160	7	+	74361	74361	16724991	3	287,576,589,	0,683,2210,
#Deleted in new
chr1_KI270766v1_alt	94497	101556	chr1_KI270766v1_alt:94497-101556	3	-	94829	98693	789624	4	894,582,309,78,	0,2645,3903,6981,
#Deleted in new
chr1_KI270766v1_alt	94497	103687	chr1_KI270766v1_alt:94497-103687	1	-	94829	98567	789624	4	894,582,309,55,	0,2645,3903,9135,
#Deleted in new
chr1_KI270766v1_alt	110155	111516	chr1_KI270766v1_alt:110155-111516	3	-	110178	111060	789624	2	1086,62,	0,1299,
#Deleted in new
chr1_KI270766v1_alt	115898	122914	chr1_KI270766v1_alt:115898-122914	3	+	118730	122582	789624	4	78,309,582,894,	0,2816,3792,6122,
#Deleted in new
chr1_KI270766v1_alt	140281	143048	chr1_KI270766v1_alt:140281-143048	7	-	140281	140281	16724991	3	559,579,287,	0,1505,2480,
#Deleted in new
chr1_KI270766v1_alt	166799	169574	chr1_KI270766v1_alt:166799-169574	3	-	166799	169574	789624	3	574,579,287,	0,1523,2488,
#Deleted in new
chr1_KI270766v1_alt	189330	192129	chr1_KI270766v1_alt:189330-192129	7	+	189330	189330	16724991	3	287,576,517,	0,683,2282,
#Deleted in new
chr1_KI270766v1_alt	197665	206903	chr1_KI270766v1_alt:197665-206903	3	+	202736	206579	789624	4	78,309,582,886,	0,5049,6024,8352,
#Deleted in new
chr1_KI270766v1_alt	217003	219095	chr1_KI270766v1_alt:217003-219095	7	-	217003	217003	16724991	2	559,580,	0,1512,
#Deleted in new
chr1_KI270766v1_alt	222592	222699	chr1_KI270766v1_alt:222592-222699	3	-	222592	222592	8553170	1	107,	0,
#Deleted in new
chr1_KI270766v1_alt	224771	227627	chr1_KI270766v1_alt:224771-227627	1	-	224838	227559	789624	3	629,576,355,	0,1543,2501,
#Deleted in new
chr1_KI270766v1_alt	224771	228605	chr1_KI270766v1_alt:224771-228605	3	-	224838	227559	789624	4	629,576,312,41,	0,1543,2501,3793,
#Deleted in new
chr1_KI270766v1_alt	246999	252454	chr1_KI270766v1_alt:246999-252454	3	+	249422	252355	789624	4	55,312,579,658,	0,2398,3106,4797,
#Deleted in new
chr1_KI270892v1_alt	9554	10601	chr1_KI270892v1_alt:9554-10601	3	+	9554	10601	789624	1	1047,	0,
#Deleted in new
chr1_KI270892v1_alt	35922	36849	chr1_KI270892v1_alt:35922-36849	3	+	35922	36849	789624	1	927,	0,
#Deleted in new
chr1_KI270892v1_alt	56200	57310	chr1_KI270892v1_alt:56200-57310	3	+	56200	57310	789624	1	1110,	0,
#Deleted in new
chr1_KI270892v1_alt	91624	92551	chr1_KI270892v1_alt:91624-92551	3	+	91624	92551	789624	1	927,	0,
#Deleted in new
chr1_KI270892v1_alt	103215	104190	chr1_KI270892v1_alt:103215-104190	3	+	103215	104190	789624	1	975,	0,
#Deleted in new
chr1_KI270892v1_alt	123768	124725	chr1_KI270892v1_alt:123768-124725	3	+	123768	124725	789624	1	957,	0,
#Deleted in new
chr1_KI270892v1_alt	134662	135902	chr1_KI270892v1_alt:134662-135902	3	-	134662	134662	8553170	2	651,316,	0,924,
#Deleted in new
chr1_KI270892v1_alt	139006	139954	chr1_KI270892v1_alt:139006-139954	3	+	139006	139954	789624	1	948,	0,
#Deleted in new
chr1_KI270892v1_alt	148725	149046	chr1_KI270892v1_alt:148725-149046	7	+	148725	148725	16724991	1	321,	0,
#Deleted in new
chr1_KN196472v1_fix	14222	14535	chr1_KN196472v1_fix:14222-14535	7	-	14222	14222	16724991	1	313,	0,
#Deleted in new
chr1_KN196472v1_fix	111332	133487	chr1_KN196472v1_fix:111332-133487	1	+	111603	132577	789624	2	685,2176,	0,19979,
#Deleted in new
chr1_KN196472v1_fix	111332	133487	chr1_KN196472v1_fix:111332-133487	3	+	111603	132577	789624	2	685,2176,	0,19979,
#Deleted in new
chr1_KN196472v1_fix	111603	132574	chr1_KN196472v1_fix:111603-132574	1	+	111603	132574	8553170	3	414,585,477,	0,19708,20494,
#Deleted in new
chr1_KN196472v1_fix	111603	132574	chr1_KN196472v1_fix:111603-132574	1	+	111603	132574	8553170	3	414,585,477,	0,19708,20494,
#Deleted in new
chr1_KN196472v1_fix	124732	125374	chr1_KN196472v1_fix:124732-125374	3	-	124732	124732	789624	2	249,145,	0,497,
#Deleted in new
chr1_KN196473v1_fix	6971	7868	chr1_KN196473v1_fix:6971-7868	7	-	6971	6971	16724991	1	897,	0,
#Deleted in new
chr1_KN196473v1_fix	17378	41079	chr1_KN196473v1_fix:17378-41079	0	+	17538	39065	789624	5	223,45,81,80,71,	0,7164,21636,21883,23630,
#Deleted in new
chr1_KN196473v1_fix	17378	34601	chr1_KN196473v1_fix:17378-34601	0	+	17538	18470	789624	4	223,158,45,117,	0,984,7164,17106,
#Deleted in new
chr1_KN196473v1_fix	17384	62643	chr1_KN196473v1_fix:17384-62643	3	+	17538	61819	0	22	217,45,117,82,81,80,107,38,143,71,89,65,103,131,126,90,159,162,77,118,138,947,	0,7158,17100,17422,21630,21877,23624,24447,24829,25384,25770,26887,27231,29040,30959,31278,31738,41682,42082,42409,43457,44312,
#Deleted in new
chr1_KN196473v1_fix	17392	39121	chr1_KN196473v1_fix:17392-39121	0	+	17392	17392	8553170	5	209,45,117,82,107,	0,7150,17092,17414,21622,
#Deleted in new
chr1_KN196473v1_fix	17395	62632	chr1_KN196473v1_fix:17395-62632	1	+	17538	61819	789624	22	206,45,117,82,81,80,107,38,143,38,89,65,103,131,126,90,159,162,77,118,138,936,	0,7147,17089,17411,21619,21866,23613,24436,24818,25406,25759,26876,27220,29029,30948,31267,31727,41671,42071,42398,43446,44301,
#Deleted in new
chr1_KN196473v1_fix	18835	62049	chr1_KN196473v1_fix:18835-62049	1	+	34857	61819	0	22	221,45,117,82,81,80,107,38,143,71,89,65,103,131,126,90,159,162,77,118,138,353,	0,5707,15649,15971,20179,20426,22173,22996,23378,23933,24319,25436,25780,27589,29508,29827,30287,40231,40631,40958,42006,42861,
#Deleted in new
chr1_KN196473v1_fix	18945	41869	chr1_KN196473v1_fix:18945-41869	0	+	34857	41869	789624	7	111,45,82,81,80,107,38,	0,5597,15861,20069,20316,22063,22886,
#Deleted in new
chr1_KN196473v1_fix	30729	62632	chr1_KN196473v1_fix:30729-62632	1	+	30779	61819	0	21	110,117,82,81,80,107,38,143,71,89,65,103,131,126,90,159,162,77,118,138,936,	0,3755,4077,8285,8532,10279,11102,11484,12039,12425,13542,13886,15695,17614,17933,18393,28337,28737,29064,30112,30967,
#Deleted in new
chr1_KN196473v1_fix	30747	41044	chr1_KN196473v1_fix:30747-41044	0	+	30779	34861	789624	7	92,104,117,82,81,80,36,	0,945,3737,4059,8267,8514,10261,
#Deleted in new
chr1_KN196473v1_fix	30779	59851	chr1_KN196473v1_fix:30779-59851	0	+	30779	30779	8553170	18	60,117,82,81,80,107,38,143,71,89,65,103,131,126,90,159,162,385,	0,3705,4027,8235,8482,10229,11052,11434,11989,12375,13492,13836,15645,17564,17883,18343,28287,28687,
#Deleted in new
chr1_KN196473v1_fix	33459	62648	chr1_KN196473v1_fix:33459-62648	0	+	33518	41049	789624	22	194,117,82,81,80,79,107,38,143,71,89,65,103,131,126,90,159,162,77,118,138,952,	0,1025,1347,5555,5802,6976,7549,8372,8754,9309,9695,10812,11156,12965,14884,15203,15663,25607,26007,26334,27382,28237,
#Deleted in new
chr1_KN196473v1_fix	33462	39204	chr1_KN196473v1_fix:33462-39204	0	+	33462	33462	8553170	4	191,117,82,190,	0,1022,1344,5552,
#Deleted in new
chr1_KN196473v1_fix	33469	61894	chr1_KN196473v1_fix:33469-61894	1	+	33518	61819	0	21	184,117,82,81,80,107,38,143,71,89,65,103,131,126,90,159,162,77,118,138,198,	0,1015,1337,5545,5792,7539,8362,8744,9299,9685,10802,11146,12955,14874,15193,15653,25597,25997,26324,27372,28227,
#Deleted in new
chr1_KN196473v1_fix	34517	35208	chr1_KN196473v1_fix:34517-35208	0	+	34517	34517	8553170	2	84,402,	0,289,
#Deleted in new
chr1_KN196473v1_fix	34860	42065	chr1_KN196473v1_fix:34860-42065	0	+	34860	34860	8553170	5	28,81,80,107,234,	0,4154,4401,6148,6971,
#Deleted in new
chr1_KN196473v1_fix	39063	41753	chr1_KN196473v1_fix:39063-41753	0	+	39063	39063	8553170	3	32,80,745,	0,198,1945,
#Deleted in new
chr1_KN196473v1_fix	42159	42211	chr1_KN196473v1_fix:42159-42211	3	+	42159	42159	5263520	1	52,	0,
#Deleted in new
chr1_KN196473v1_fix	42816	44654	chr1_KN196473v1_fix:42816-44654	0	+	42816	42816	8553170	5	23,89,88,65,39,	0,338,877,1455,1799,
#Deleted in new
chr1_KN196473v1_fix	44660	59126	chr1_KN196473v1_fix:44660-59126	0	+	44660	59126	789624	5	58,131,90,159,60,	0,1764,4002,4462,14406,
#Deleted in new
chr1_KN196473v1_fix	58846	59639	chr1_KN196473v1_fix:58846-59639	0	+	58846	58846	8553170	2	382,173,	0,620,
#Deleted in new
chr1_KN196473v1_fix	59887	62352	chr1_KN196473v1_fix:59887-62352	0	+	59887	62061	789624	4	24,138,119,358,	0,954,1809,2107,
#Deleted in new
chr1_KN196473v1_fix	80860	81164	chr1_KN196473v1_fix:80860-81164	3	-	80860	80860	8553170	1	304,	0,
#Deleted in new
chr1_KN196473v1_fix	81557	81659	chr1_KN196473v1_fix:81557-81659	3	-	81557	81557	8553170	1	102,	0,
#Deleted in new
chr1_KN196473v1_fix	89986	90050	chr1_KN196473v1_fix:89986-90050	3	-	89986	89986	8553170	1	64,	0,
#Deleted in new
chr1_KN196473v1_fix	127994	128232	chr1_KN196473v1_fix:127994-128232	7	-	127994	127994	16724991	1	238,	0,
#Deleted in new
chr1_KN196473v1_fix	133288	133392	chr1_KN196473v1_fix:133288-133392	3	+	133288	133288	8553170	1	104,	0,
#Deleted in new
chr1_KN196473v1_fix	135064	135299	chr1_KN196473v1_fix:135064-135299	7	+	135064	135064	16724991	1	235,	0,
#Deleted in new
chr1_KN196474v1_fix	2425	46932	chr1_KN196474v1_fix:2425-46932	3	-	4469	19887	789624	5	2319,867,144,261,319,	0,5331,10143,17245,44188,
#Deleted in new
chr1_KN196474v1_fix	2430	46642	chr1_KN196474v1_fix:2430-46642	1	-	4469	19887	789624	5	2314,867,144,261,788,	0,5326,10138,17240,43424,
#Deleted in new
chr1_KN196474v1_fix	4603	46642	chr1_KN196474v1_fix:4603-46642	0	-	4603	19887	789624	5	141,867,144,261,788,	0,3153,7965,15067,41251,
#Deleted in new
chr1_KN196474v1_fix	8094	26567	chr1_KN196474v1_fix:8094-26567	0	-	8094	19887	789624	4	529,144,261,165,	0,4474,11576,18308,
#Deleted in new
chr1_KN196474v1_fix	8338	47592	chr1_KN196474v1_fix:8338-47592	0	-	8338	19887	789624	4	285,144,261,175,	0,4230,11332,39079,
#Deleted in new
chr1_KN196474v1_fix	8596	12971	chr1_KN196474v1_fix:8596-12971	0	-	8596	8596	8553170	2	27,403,	0,3972,
#Deleted in new
chr1_KN196474v1_fix	14001	14916	chr1_KN196474v1_fix:14001-14916	7	+	14001	14001	16724991	1	915,	0,
#Deleted in new
chr1_KN196474v1_fix	19626	46760	chr1_KN196474v1_fix:19626-46760	0	-	19626	19626	8553170	2	305,147,	0,26987,
#Deleted in new
chr1_KN196474v1_fix	47179	47331	chr1_KN196474v1_fix:47179-47331	7	+	47179	47179	16724991	2	90,60,	0,92,
#Deleted in new
chr1_KN538360v1_fix	11197	12714	chr1_KN538360v1_fix:11197-12714	1	-	11197	11197	8553170	2	316,275,	0,1242,
#Deleted in new
chr1_KN538360v1_fix	11197	13786	chr1_KN538360v1_fix:11197-13786	3	-	11197	11197	789624	2	316,410,	0,2179,
#Deleted in new
chr1_KN538360v1_fix	11197	13789	chr1_KN538360v1_fix:11197-13789	0	-	11197	11197	8553170	2	316,97,	0,2495,
#Deleted in new
chr1_KN538360v1_fix	12540	25997	chr1_KN538360v1_fix:12540-25997	3	+	17702	22079	789624	4	213,192,116,4698,	0,5145,6694,8759,
#Deleted in new
chr1_KN538360v1_fix	17023	21907	chr1_KN538360v1_fix:17023-21907	0	+	17023	17023	8553170	4	187,192,116,608,	0,662,2211,4276,
#Deleted in new
chr1_KN538360v1_fix	17684	26370	chr1_KN538360v1_fix:17684-26370	0	+	17684	17684	8553170	4	193,116,128,57,	0,1550,7857,8629,
#Deleted in new
chr1_KN538360v1_fix	17719	26373	chr1_KN538360v1_fix:17719-26373	0	+	17719	17719	8553170	3	158,160,60,	0,7790,8594,
#Deleted in new
chr1_KN538360v1_fix	45377	46983	chr1_KN538360v1_fix:45377-46983	7	-	45377	45377	16724991	2	547,577,	0,1029,
#Deleted in new
chr1_KN538360v1_fix	83425	84282	chr1_KN538360v1_fix:83425-84282	7	+	83425	83425	16724991	1	857,	0,
#Deleted in new
chr1_KN538360v1_fix	107993	459395	chr1_KN538360v1_fix:107993-459395	1	+	128717	457478	789624	10	133,134,68,114,172,151,36,202,145,2009,	0,20681,34600,59216,89902,136253,184901,259646,295274,349393,
#Deleted in new
chr1_KN538360v1_fix	107993	459395	chr1_KN538360v1_fix:107993-459395	1	+	128717	457478	789624	12	133,134,68,114,195,216,172,151,36,202,145,2009,	0,20681,34600,59216,72216,76212,89902,136253,184901,259646,295274,349393,
#Deleted in new
chr1_KN538360v1_fix	108647	459395	chr1_KN538360v1_fix:108647-459395	3	+	128717	457478	789624	11	199,134,68,114,216,172,151,36,202,145,2009,	0,20027,33946,58562,75558,89248,135599,184247,258992,294620,348739,
#Deleted in new
chr1_KN538360v1_fix	108647	459395	chr1_KN538360v1_fix:108647-459395	1	+	108752	457478	789624	11	199,68,114,195,216,172,151,36,202,145,2009,	0,33946,58562,71562,75558,89248,135599,184247,258992,294620,348739,
#Deleted in new
chr1_KN538360v1_fix	108694	459395	chr1_KN538360v1_fix:108694-459395	1	+	128717	457478	789624	12	152,134,68,114,195,216,172,151,36,202,145,2009,	0,19980,33899,58515,71515,75511,89201,135552,184200,258945,294573,348692,
#Deleted in new
chr1_KN538360v1_fix	109041	459395	chr1_KN538360v1_fix:109041-459395	1	+	128717	457478	789624	12	184,134,68,114,195,216,172,151,36,202,145,2009,	0,19633,33552,58168,71168,75164,88854,135205,183853,258598,294226,348345,
#Deleted in new
chr1_KN538360v1_fix	142593	244397	chr1_KN538360v1_fix:142593-244397	0	+	167239	244397	789624	5	68,114,216,172,151,	0,24616,41612,55302,101653,
#Deleted in new
chr1_KN538360v1_fix	149456	370284	chr1_KN538360v1_fix:149456-370284	1	+	367703	367952	789624	4	69,114,36,2645,	0,17753,143438,218183,
#Deleted in new
chr1_KN538360v1_fix	153895	154009	chr1_KN538360v1_fix:153895-154009	3	-	153895	153895	8553170	1	114,	0,
#Deleted in new
chr1_KN538360v1_fix	219324	459395	chr1_KN538360v1_fix:219324-459395	1	+	244320	457478	789624	6	171,151,36,202,145,2009,	0,24922,73570,148315,183943,238062,
#Deleted in new
chr1_KN538360v1_fix	242086	242754	chr1_KN538360v1_fix:242086-242754	7	-	242086	242086	16724991	1	668,	0,
#Deleted in new
chr1_KN538361v1_fix	32296	40131	chr1_KN538361v1_fix:32296-40131	3	+	32296	32296	8553170	3	148,201,4327,	0,3182,3508,
#Deleted in new
chr1_KN538361v1_fix	32302	38901	chr1_KN538361v1_fix:32302-38901	1	+	32302	32302	789624	4	142,201,159,88,	0,3176,5654,6511,
#Deleted in new
chr1_KN538361v1_fix	35745	44247	chr1_KN538361v1_fix:35745-44247	3	-	35745	35745	8553170	5	566,114,226,44,278,	0,1788,3297,4338,8224,
#Deleted in new
chr1_KN538361v1_fix	47639	88519	chr1_KN538361v1_fix:47639-88519	3	+	47731	86757	0	16	184,181,73,62,118,126,173,104,124,108,152,145,94,80,126,1996,	0,17164,18495,19241,20685,20907,23499,23822,24959,25446,27693,32188,33490,34578,35509,38884,
#Deleted in new
chr1_KN538361v1_fix	66000	68672	chr1_KN538361v1_fix:66000-68672	0	+	66000	66000	8553170	4	207,62,118,126,	0,880,2324,2546,
#Deleted in new
chr1_KN538361v1_fix	82145	88518	chr1_KN538361v1_fix:82145-88518	0	+	82145	82145	8553170	2	1129,1995,	0,4378,
#Deleted in new
chr1_KN538361v1_fix	82145	88482	chr1_KN538361v1_fix:82145-88482	0	+	82145	82145	8553170	3	152,126,1959,	0,1003,4378,
#Deleted in new
chr1_KN538361v1_fix	91611	126747	chr1_KN538361v1_fix:91611-126747	3	+	91651	125593	789624	16	132,181,73,62,118,126,179,104,112,108,152,145,103,80,126,1388,	0,10480,13035,16561,17621,18739,21135,21781,21969,24242,25537,27421,27676,31252,31573,33748,
#Deleted in new
chr1_KN538361v1_fix	120402	120489	chr1_KN538361v1_fix:120402-120489	3	+	120402	120402	5263520	1	87,	0,
#Deleted in new
chr1_KN538361v1_fix	153418	180019	chr1_KN538361v1_fix:153418-180019	1	+	153446	179590	789624	4	120,181,67,473,	0,22773,25747,26128,
#Deleted in new
chr1_KN538361v1_fix	153420	209227	chr1_KN538361v1_fix:153420-209227	3	+	153446	208978	0	16	118,181,67,68,118,126,179,104,112,108,155,145,103,71,129,483,	0,22771,25745,27961,29840,31490,33745,34101,37830,39743,46335,47785,48159,50640,51082,55324,
#Deleted in new
chr1_KN538361v1_fix	191256	193430	chr1_KN538361v1_fix:191256-193430	0	+	191256	191256	8553170	2	106,267,	0,1907,
#Deleted in new
chr1_KN538361v1_fix	193149	201670	chr1_KN538361v1_fix:193149-201670	0	+	193149	193149	8553170	4	122,155,145,91,	0,6606,8056,8430,
#Deleted in new
chr1_KN538361v1_fix	193952	204072	chr1_KN538361v1_fix:193952-204072	0	+	193952	193952	8553170	5	56,155,145,103,12,	0,5803,7253,7627,10108,
#Deleted in new
chr1_KN538361v1_fix	217418	246922	chr1_KN538361v1_fix:217418-246922	3	+	217468	246661	0	16	166,178,73,68,118,126,179,104,112,108,155,157,124,71,162,495,	0,860,3231,7724,8851,9771,16185,16581,19918,21779,22104,22755,23344,24875,26490,29009,
#Deleted in new
chr1_KN538361v1_fix	251982	252605	chr1_KN538361v1_fix:251982-252605	3	+	251982	251982	8553170	2	245,66,	0,557,
#Deleted in new
chr1_KN538361v1_fix	251982	284947	chr1_KN538361v1_fix:251982-284947	3	-	254312	283737	0	13	2435,78,73,106,181,167,115,89,132,144,94,293,180,	0,3214,5362,6313,6777,9720,13954,15443,15945,18781,22346,31470,32785,
#Deleted in new
chr1_KN538361v1_fix	253061	254269	chr1_KN538361v1_fix:253061-254269	0	-	253061	253061	8553170	2	716,67,	0,1141,
#Deleted in new
chr1_KN538361v1_fix	253898	283784	chr1_KN538361v1_fix:253898-283784	1	-	254312	283737	0	12	519,78,73,106,181,167,115,89,132,144,94,332,	0,1298,3446,4397,4861,7804,12038,13527,14029,16865,20430,29554,
#Deleted in new
chr1_KQ031383v1_fix	4198	4672	chr1_KQ031383v1_fix:4198-4672	3	-	4198	4198	8553170	2	254,124,	0,350,
#Deleted in new
chr1_KQ031383v1_fix	6117	12923	chr1_KQ031383v1_fix:6117-12923	3	-	6454	10302	789624	4	899,582,309,55,	0,2644,3892,6751,
#Deleted in new
chr1_KQ031383v1_fix	19637	22870	chr1_KQ031383v1_fix:19637-22870	7	-	19637	19637	16724991	4	80,477,577,283,	0,358,1977,2950,
#Deleted in new
chr1_KQ031383v1_fix	28920	30238	chr1_KQ031383v1_fix:28920-30238	3	-	28920	29802	789624	2	1063,45,	0,1273,
#Deleted in new
chr1_KQ031383v1_fix	38598	43422	chr1_KQ031383v1_fix:38598-43422	3	+	40522	43292	789624	4	62,312,579,689,	0,1899,2607,4135,
#Deleted in new
chr1_KQ031383v1_fix	60736	67714	chr1_KQ031383v1_fix:60736-67714	3	-	61056	64907	789624	4	882,582,309,55,	0,2630,3878,6923,
#Deleted in new
chr1_KQ031383v1_fix	74408	79783	chr1_KQ031383v1_fix:74408-79783	3	-	74428	77360	789624	4	579,579,312,55,	0,1690,2665,5320,
#Deleted in new
chr1_KQ031383v1_fix	84620	84992	chr1_KQ031383v1_fix:84620-84992	1	-	84620	84992	8553170	1	372,	0,
#Deleted in new
chr1_KQ031383v1_fix	84620	84992	chr1_KQ031383v1_fix:84620-84992	3	-	84620	84992	8553170	1	372,	0,
#Deleted in new
chr1_KQ031383v1_fix	98122	101995	chr1_KQ031383v1_fix:98122-101995	3	+	99205	101926	789624	4	98,287,576,631,	0,1083,1752,3242,
#Deleted in new
chr1_KQ031383v1_fix	99137	101993	chr1_KQ031383v1_fix:99137-101993	1	+	99205	101926	789624	3	355,576,629,	0,737,2227,
#Deleted in new
chr1_KQ031383v1_fix	104066	104173	chr1_KQ031383v1_fix:104066-104173	3	+	104066	104066	8553170	1	107,	0,
#Deleted in new
chr1_KQ031383v1_fix	107674	109766	chr1_KQ031383v1_fix:107674-109766	7	+	107674	107674	16724991	2	580,559,	0,1533,
#Deleted in new
chr1_KQ031383v1_fix	119984	129093	chr1_KQ031383v1_fix:119984-129093	3	-	120187	124031	789624	4	765,582,309,64,	0,2512,3760,9045,
#Deleted in new
chr1_KQ031383v1_fix	119984	126929	chr1_KQ031383v1_fix:119984-126929	1	-	120187	124031	789624	4	765,582,309,64,	0,2512,3760,6881,
#Deleted in new
chr1_KQ031383v1_fix	169105	170212	chr1_KQ031383v1_fix:169105-170212	7	-	169105	169105	16724991	3	117,279,417,	0,118,690,
#Deleted in new
chr1_KQ031383v1_fix	183678	186470	chr1_KQ031383v1_fix:183678-186470	7	+	183678	183678	16724991	3	312,579,559,	0,708,2233,
#Deleted in new
chr1_KQ031383v1_fix	203815	210831	chr1_KQ031383v1_fix:203815-210831	3	-	204147	207999	789624	4	894,582,309,78,	0,2642,3891,6938,
#Deleted in new
chr1_KQ031383v1_fix	215208	216569	chr1_KQ031383v1_fix:215208-216569	3	+	215664	216546	789624	2	62,1086,	0,275,
#Deleted in new
chr1_KQ031383v1_fix	223016	232224	chr1_KQ031383v1_fix:223016-232224	3	+	228033	231892	789624	4	78,309,582,894,	0,5001,5982,8314,
#Deleted in new
chr1_KQ031383v1_fix	225192	232224	chr1_KQ031383v1_fix:225192-232224	1	+	228033	231892	789624	4	55,309,582,894,	0,2825,3806,6138,
#Deleted in new
chr1_KQ031383v1_fix	249518	252311	chr1_KQ031383v1_fix:249518-252311	7	-	249518	249518	16724991	3	584,576,287,	0,1534,2506,
#Deleted in new
chr1_KQ031383v1_fix	258742	260029	chr1_KQ031383v1_fix:258742-260029	7	-	258742	258742	16724991	2	579,312,	0,975,
#Deleted in new
chr1_KQ031383v1_fix	269835	271194	chr1_KQ031383v1_fix:269835-271194	3	-	269858	270740	789624	2	1086,62,	0,1297,
#Deleted in new
chr1_KQ031383v1_fix	283157	285955	chr1_KQ031383v1_fix:283157-285955	7	+	283157	283157	16724991	3	287,576,589,	0,683,2209,
#Deleted in new
chr1_KQ031383v1_fix	284132	285749	chr1_KQ031383v1_fix:284132-285749	4	+	284132	284132	16724991	2	284,383,	0,1234,
#Deleted in new
chr1_KQ031383v1_fix	301320	301800	chr1_KQ031383v1_fix:301320-301800	3	-	301320	301320	8553170	2	260,124,	0,356,
#Deleted in new
chr1_KQ031383v1_fix	303244	310301	chr1_KQ031383v1_fix:303244-310301	3	-	303576	307435	5263520	4	894,582,309,78,	0,2644,3898,6979,
#Deleted in new
chr1_KQ031383v1_fix	318925	319807	chr1_KQ031383v1_fix:318925-319807	3	-	318925	319807	789624	1	882,	0,
#Deleted in new
chr1_KQ031383v1_fix	326794	333804	chr1_KQ031383v1_fix:326794-333804	3	+	329620	333472	789624	4	78,309,582,894,	0,2810,3786,6116,
#Deleted in new
chr1_KQ031383v1_fix	350669	352470	chr1_KQ031383v1_fix:350669-352470	1	-	351162	352322	8553170	2	1052,279,	0,1522,
#Deleted in new
chr1_KQ031383v1_fix	351084	355749	chr1_KQ031383v1_fix:351084-355749	3	-	351162	353929	789624	4	637,579,312,78,	0,1583,2558,4587,
#Deleted in new
chr1_KQ031383v1_fix	367424	368534	chr1_KQ031383v1_fix:367424-368534	7	+	367424	367424	16724991	3	420,279,117,	0,713,993,
#Deleted in new
chr1_KQ031383v1_fix	377044	380446	chr1_KQ031383v1_fix:377044-380446	3	-	377671	380446	789624	3	1201,579,287,	0,2150,3115,
#Deleted in new
chr1_KQ031383v1_fix	400202	402992	chr1_KQ031383v1_fix:400202-402992	7	+	400202	400202	16724991	3	287,576,508,	0,683,2282,
#Deleted in new
chr1_KQ031383v1_fix	408551	417654	chr1_KQ031383v1_fix:408551-417654	3	+	413608	417451	789624	4	64,309,582,765,	0,5035,6010,8338,
#Deleted in new
chr1_KQ031383v1_fix	427878	429967	chr1_KQ031383v1_fix:427878-429967	7	-	427878	427878	16724991	2	573,495,	0,1594,
#Deleted in new
chr1_KQ031383v1_fix	433464	433571	chr1_KQ031383v1_fix:433464-433571	3	-	433464	433464	8553170	1	107,	0,
#Deleted in new
chr1_KQ031383v1_fix	435374	439494	chr1_KQ031383v1_fix:435374-439494	3	-	435710	438431	789624	4	898,576,312,58,	0,1812,2770,4062,
#Deleted in new
chr1_KQ031383v1_fix	435507	438509	chr1_KQ031383v1_fix:435507-438509	1	-	435710	438431	789624	3	765,576,365,	0,1679,2637,
#Deleted in new
chr1_KQ031383v1_fix	435641	439514	chr1_KQ031383v1_fix:435641-439514	1	-	435710	438431	789624	4	631,576,287,98,	0,1545,2503,3775,
#Deleted in new
chr1_KQ031383v1_fix	452651	453023	chr1_KQ031383v1_fix:452651-453023	1	+	452651	453023	8553170	1	372,	0,
#Deleted in new
chr1_KQ031383v1_fix	452651	453023	chr1_KQ031383v1_fix:452651-453023	3	+	452651	453023	8553170	1	372,	0,
#Deleted in new
chr1_KQ031383v1_fix	457878	463247	chr1_KQ031383v1_fix:457878-463247	3	+	460294	463227	789624	4	48,312,579,579,	0,2391,3099,4790,
#Deleted in new
chr1_KQ458382v1_alt	17182	18422	chr1_KQ458382v1_alt:17182-18422	7	+	17182	17182	16724991	1	1240,	0,
#Deleted in new
chr1_KQ458383v1_alt	7279	7739	chr1_KQ458383v1_alt:7279-7739	7	+	7279	7279	16724991	1	460,	0,
#Deleted in new
chr1_KQ458383v1_alt	51286	56524	chr1_KQ458383v1_alt:51286-56524	1	-	51286	51286	8553170	3	1806,490,1436,	0,2687,3802,
#Deleted in new
chr1_KQ458383v1_alt	51287	56731	chr1_KQ458383v1_alt:51287-56731	3	-	51287	51287	789624	1	5444,	0,
#Deleted in new
chr1_KQ458383v1_alt	54334	55433	chr1_KQ458383v1_alt:54334-55433	1	-	54334	54334	8553170	2	55,345,	0,754,
#Deleted in new
chr1_KQ458383v1_alt	67775	72845	chr1_KQ458383v1_alt:67775-72845	3	+	67775	67775	8553170	2	81,523,	0,4547,
#Deleted in new
chr1_KQ458383v1_alt	73749	76611	chr1_KQ458383v1_alt:73749-76611	0	-	73749	73749	8553170	2	336,221,	0,2641,
#Deleted in new
chr1_KQ458383v1_alt	73941	83580	chr1_KQ458383v1_alt:73941-83580	0	-	76468	83580	789624	5	144,92,239,122,49,	0,2449,6865,7238,9590,
#Deleted in new
chr1_KQ458383v1_alt	74666	114315	chr1_KQ458383v1_alt:74666-114315	3	-	80432	107813	0	10	6379,122,150,215,136,177,114,108,119,126,	0,6513,8865,13795,16840,18868,28830,33066,33802,39523,
#Deleted in new
chr1_KQ458383v1_alt	79761	114289	chr1_KQ458383v1_alt:79761-114289	1	-	80432	110987	0	11	1284,122,150,215,136,177,114,108,119,166,100,	0,1418,3770,8700,11745,13773,23735,27971,28707,31069,34428,
#Deleted in new
chr1_KQ458383v1_alt	79762	81872	chr1_KQ458383v1_alt:79762-81872	0	-	79762	79762	8553170	3	1283,122,232,	0,1417,1878,
#Deleted in new
chr1_KQ458383v1_alt	79764	114301	chr1_KQ458383v1_alt:79764-114301	1	-	80432	110987	0	11	1281,122,150,206,136,177,114,108,119,169,112,	0,1415,3767,8697,11742,13770,23732,27968,28704,31066,34425,
#Deleted in new
chr1_KQ458383v1_alt	79766	114241	chr1_KQ458383v1_alt:79766-114241	1	-	80432	110987	0	11	1279,122,150,206,136,177,114,108,119,166,52,	0,1413,3765,8695,11740,13768,23730,27966,28702,31064,34423,
#Deleted in new
chr1_KQ458383v1_alt	80311	114274	chr1_KQ458383v1_alt:80311-114274	1	-	80432	107813	789624	9	734,122,150,206,136,177,108,119,85,	0,868,3220,8150,11195,13223,27421,28157,33878,
#Deleted in new
chr1_KQ458383v1_alt	80432	110987	chr1_KQ458383v1_alt:80432-110987	1	-	80432	110987	0	9	613,122,150,206,136,177,108,119,157,	0,747,3099,8029,11074,13102,27300,28036,30398,
#Deleted in new
chr1_KQ458383v1_alt	83531	108528	chr1_KQ458383v1_alt:83531-108528	0	-	83531	83531	8553170	6	150,206,136,177,108,60,	0,4930,7975,10003,24201,24937,
#Deleted in new
chr1_KQ458383v1_alt	83577	103610	chr1_KQ458383v1_alt:83577-103610	0	-	83577	83577	8553170	4	104,206,136,114,	0,4884,7929,19919,
#Deleted in new
chr1_KQ458383v1_alt	88461	108114	chr1_KQ458383v1_alt:88461-108114	0	-	88461	88461	8553170	6	206,136,177,114,108,73,	0,3045,5073,15035,19271,19580,
#Deleted in new
chr1_KQ458383v1_alt	108248	114296	chr1_KQ458383v1_alt:108248-114296	0	-	108248	108248	8553170	3	339,166,107,	0,2582,5941,
#Deleted in new
chr1_KQ458383v1_alt	129426	139421	chr1_KQ458383v1_alt:129426-139421	3	-	131947	137984	789624	4	3774,127,93,77,	0,7594,8525,9918,
#Deleted in new
chr1_KQ458383v1_alt	129953	138365	chr1_KQ458383v1_alt:129953-138365	1	-	131947	137984	789624	3	3247,127,414,	0,7067,7998,
#Deleted in new
chr1_KQ458383v1_alt	138975	141762	chr1_KQ458383v1_alt:138975-141762	0	+	138975	138975	8553170	3	33,71,271,	0,2142,2516,
#Deleted in new
chr1_KQ458383v1_alt	139196	141818	chr1_KQ458383v1_alt:139196-141818	3	+	139196	139196	8553170	2	296,701,	0,1921,
#Deleted in new
chr1_KQ458383v1_alt	139214	141761	chr1_KQ458383v1_alt:139214-141761	1	+	139214	139214	789624	1	2547,	0,
#Deleted in new
chr1_KQ458383v1_alt	139216	141491	chr1_KQ458383v1_alt:139216-141491	1	+	139216	139216	8553170	2	87,374,	0,1901,
#Deleted in new
chr1_KQ458383v1_alt	139228	141762	chr1_KQ458383v1_alt:139228-141762	1	+	139228	139228	789624	3	264,71,271,	0,1889,2263,
#Deleted in new
chr1_KQ458383v1_alt	140232	140325	chr1_KQ458383v1_alt:140232-140325	3	+	140232	140232	8553170	1	93,	0,
#Deleted in new
chr1_KQ458383v1_alt	141122	141762	chr1_KQ458383v1_alt:141122-141762	1	+	141122	141122	8553170	2	66,310,	0,330,
#Deleted in new
chr1_KQ458383v1_alt	148358	149008	chr1_KQ458383v1_alt:148358-149008	3	-	148358	148358	8553170	1	650,	0,
#Deleted in new
chr1_KQ458383v1_alt	151039	194719	chr1_KQ458383v1_alt:151039-194719	3	-	151444	194612	789624	11	414,72,147,155,57,164,63,142,106,63,176,	0,3285,6212,12818,16484,16731,27603,36188,36843,38016,43504,
#Deleted in new
chr1_KQ458383v1_alt	153411	194597	chr1_KQ458383v1_alt:153411-194597	0	-	154029	194597	789624	11	636,72,147,155,57,164,63,142,106,63,54,	0,913,3840,10446,14112,14359,25231,33816,34471,35644,41132,
#Deleted in new
chr1_KQ458383v1_alt	173459	194686	chr1_KQ458383v1_alt:173459-194686	1	-	174117	194612	789624	6	680,63,142,106,63,143,	0,5183,13768,14423,15596,21084,
#Deleted in new
chr1_KQ458383v1_alt	174047	189365	chr1_KQ458383v1_alt:174047-189365	1	-	174117	189076	789624	5	92,63,142,106,310,	0,4595,13180,13835,15008,
#Deleted in new
chr1_KQ458383v1_alt	178538	189215	chr1_KQ458383v1_alt:178538-189215	0	-	178538	178538	8553170	4	167,142,106,160,	0,8689,9344,10517,
#Deleted in new
chr1_KQ458383v1_alt	180810	182125	chr1_KQ458383v1_alt:180810-182125	7	+	180810	180810	16724991	3	297,84,45,	0,631,1270,
#Deleted in new
chr1_KQ458383v1_alt	187323	188277	chr1_KQ458383v1_alt:187323-188277	0	-	187323	187323	8553170	2	46,395,	0,559,
#Deleted in new
chr1_KQ458383v1_alt	198541	206656	chr1_KQ458383v1_alt:198541-206656	1	-	199834	206621	0	10	1368,91,223,196,108,68,116,86,178,118,	0,2472,3133,4514,4862,5063,5691,5970,7288,7997,
#Deleted in new
chr1_KQ458383v1_alt	198541	254157	chr1_KQ458383v1_alt:198541-254157	1	-	199834	254112	0	25	1368,91,223,196,108,68,116,86,178,95,134,191,49,88,70,110,87,76,86,112,50,75,146,73,174,	0,2472,3133,4514,4862,5063,5691,5970,7288,7997,8348,8567,8861,10184,10598,12539,12824,13092,13623,13938,22916,24134,27318,27559,55442,
#Deleted in new
chr1_KQ458383v1_alt	198541	254543	chr1_KQ458383v1_alt:198541-254543	3	-	201720	254112	789624	10	1368,91,128,54,50,75,146,73,148,93,	0,2472,3133,13996,22916,24134,27318,27559,55442,55909,
#Deleted in new
chr1_KQ458383v1_alt	199510	203511	chr1_KQ458383v1_alt:199510-203511	0	-	199834	203511	789624	5	399,91,223,115,108,	0,1503,2164,3626,3893,
#Deleted in new
chr1_KQ458383v1_alt	199605	254163	chr1_KQ458383v1_alt:199605-254163	0	-	226136	254112	789624	25	304,91,223,196,171,68,116,86,178,95,134,191,49,88,70,110,87,76,86,112,50,75,146,73,149,	0,1408,2069,3450,3735,3999,4627,4906,6224,6933,7284,7503,7797,9120,9534,11475,11760,12028,12559,12874,21852,23070,26254,26495,54409,
#Deleted in new
chr1_KQ458383v1_alt	199700	254158	chr1_KQ458383v1_alt:199700-254158	1	-	199834	254112	0	24	209,91,223,196,108,68,116,86,178,95,134,191,49,88,70,110,87,76,86,135,75,146,73,175,	0,1313,1974,3355,3703,3904,4532,4811,6129,6838,7189,7408,7702,9025,9439,11380,11665,11933,12464,12779,22975,26159,26400,54283,
#Deleted in new
chr1_KQ458383v1_alt	203181	206947	chr1_KQ458383v1_alt:203181-206947	0	-	205787	206947	789624	8	70,108,68,116,86,306,95,58,	0,222,423,1051,1330,2520,3357,3708,
#Deleted in new
chr1_KQ458383v1_alt	206905	212250	chr1_KQ458383v1_alt:206905-212250	0	-	208809	212250	789624	8	118,191,49,88,110,87,76,86,	0,203,497,1820,4175,4460,4728,5259,
#Deleted in new
chr1_KQ458383v1_alt	206942	208995	chr1_KQ458383v1_alt:206942-208995	0	-	206942	206942	8553170	4	81,191,49,270,	0,166,460,1783,
#Deleted in new
chr1_KQ458383v1_alt	211328	254171	chr1_KQ458383v1_alt:211328-254171	0	-	211328	211328	8553170	9	124,65,86,112,50,75,146,73,157,	0,305,836,1151,10129,11347,14531,14772,42686,
#Deleted in new
chr1_KQ458383v1_alt	221457	254547	chr1_KQ458383v1_alt:221457-254547	0	-	221457	254112	789624	6	50,75,146,73,148,97,	0,1218,4402,4643,32526,32993,
#Deleted in new
chr1_KQ458383v1_alt	225969	250158	chr1_KQ458383v1_alt:225969-250158	0	-	225969	225969	8553170	3	36,73,371,	0,131,23818,
#Deleted in new
chr1_KQ458383v1_alt	274398	274770	chr1_KQ458383v1_alt:274398-274770	1	-	274398	274770	789624	1	372,	0,
#Deleted in new
chr1_KQ458383v1_alt	274398	274770	chr1_KQ458383v1_alt:274398-274770	3	-	274398	274770	789624	1	372,	0,
#Deleted in new
chr1_KQ458383v1_alt	276408	301199	chr1_KQ458383v1_alt:276408-301199	3	-	279858	300772	0	7	3719,193,115,159,220,106,679,	0,9905,12586,14483,15407,17953,24112,
#Deleted in new
chr1_KQ458383v1_alt	286337	289375	chr1_KQ458383v1_alt:286337-289375	0	-	286337	286337	8553170	2	169,381,	0,2657,
#Deleted in new
chr1_KQ458383v1_alt	319117	320894	chr1_KQ458383v1_alt:319117-320894	3	-	319117	319117	8553170	2	305,151,	0,1626,
#Deleted in new
chr1_KQ458383v1_alt	327896	329773	chr1_KQ458383v1_alt:327896-329773	3	-	328938	329405	0	3	498,85,668,	0,1017,1209,
#Deleted in new
chr1_KQ458383v1_alt	327912	329054	chr1_KQ458383v1_alt:327912-329054	0	-	327912	327912	8553170	2	482,141,	0,1001,
#Deleted in new
chr1_KQ458383v1_alt	328423	329422	chr1_KQ458383v1_alt:328423-329422	0	-	328423	328423	8553170	2	575,317,	0,682,
#Deleted in new
chr1_KQ458384v1_alt	953	2341	chr1_KQ458384v1_alt:953-2341	7	+	953	953	16724991	1	1388,	0,
#Deleted in new
chr1_KQ458384v1_alt	6153	7167	chr1_KQ458384v1_alt:6153-7167	3	-	6153	6153	8553170	2	271,157,	0,857,
#Deleted in new
chr1_KQ458384v1_alt	76576	76823	chr1_KQ458384v1_alt:76576-76823	7	+	76576	76576	16724991	1	247,	0,
#Deleted in new
chr1_KQ458384v1_alt	93514	148073	chr1_KQ458384v1_alt:93514-148073	3	-	93797	147844	789624	12	418,57,160,126,184,79,111,96,194,101,148,341,	0,3167,4233,5636,8680,15713,20927,30131,34399,39245,44758,54218,
#Deleted in new
chr1_KQ458384v1_alt	97803	109391	chr1_KQ458384v1_alt:97803-109391	0	-	97803	97803	8553170	4	104,126,184,164,	0,1347,4391,11424,
#Deleted in new
chr1_KQ458384v1_alt	97878	114522	chr1_KQ458384v1_alt:97878-114522	0	-	97878	97878	8553170	4	29,126,79,81,	0,1272,11349,16563,
#Deleted in new
chr1_KQ458384v1_alt	107049	147846	chr1_KQ458384v1_alt:107049-147846	0	-	128088	147844	789624	6	2257,111,96,194,148,114,	0,7392,16596,20864,31223,40683,
#Deleted in new
chr1_KQ458384v1_alt	108487	148014	chr1_KQ458384v1_alt:108487-148014	1	-	109210	147844	789624	8	819,111,96,194,101,148,123,282,	0,5954,15158,19426,24272,29785,31290,39245,
#Deleted in new
chr1_KQ458384v1_alt	122499	148017	chr1_KQ458384v1_alt:122499-148017	0	-	122499	122499	8553170	4	1242,194,148,285,	0,5414,15773,25233,
#Deleted in new
chr1_KQ458384v1_alt	123695	128262	chr1_KQ458384v1_alt:123695-128262	0	-	123695	123695	8553170	2	46,349,	0,4218,
#Deleted in new
chr1_KQ458384v1_alt	163562	164277	chr1_KQ458384v1_alt:163562-164277	7	+	163562	163562	16724991	1	715,	0,
#Deleted in new
chr1_KQ458384v1_alt	181111	181633	chr1_KQ458384v1_alt:181111-181633	7	+	181111	181111	16724991	1	522,	0,
#Deleted in new
chr1_KQ458384v1_alt	181643	183437	chr1_KQ458384v1_alt:181643-183437	7	-	181643	181643	16724991	1	1794,	0,
#Deleted in new
chr1_KQ458384v1_alt	183644	185007	chr1_KQ458384v1_alt:183644-185007	7	-	183644	183644	16724991	1	1363,	0,
#Deleted in new
chr1_KQ458384v1_alt	185003	185298	chr1_KQ458384v1_alt:185003-185298	7	-	185003	185003	16724991	1	295,	0,
#Deleted in new
chr1_KQ458384v1_alt	185350	185689	chr1_KQ458384v1_alt:185350-185689	7	-	185350	185350	16724991	1	339,	0,
#Deleted in new
chr1_KQ458384v1_alt	185750	185982	chr1_KQ458384v1_alt:185750-185982	7	-	185750	185750	16724991	1	232,	0,
#Deleted in new
chr1_KQ458384v1_alt	209352	210529	chr1_KQ458384v1_alt:209352-210529	7	+	209352	209352	16724991	2	438,270,	0,907,
#Deleted in new
chr1_KQ983255v1_alt	10381	11488	chr1_KQ983255v1_alt:10381-11488	7	-	10381	10381	16724991	3	117,279,417,	0,118,690,
#Deleted in new
chr1_KQ983255v1_alt	24954	27746	chr1_KQ983255v1_alt:24954-27746	7	+	24954	24954	16724991	3	312,579,559,	0,708,2233,
#Deleted in new
chr1_KQ983255v1_alt	45091	52107	chr1_KQ983255v1_alt:45091-52107	3	-	45423	49275	789624	4	894,582,309,78,	0,2642,3891,6938,
#Deleted in new
chr1_KQ983255v1_alt	56484	57845	chr1_KQ983255v1_alt:56484-57845	3	+	56940	57822	789624	2	62,1086,	0,275,
#Deleted in new
chr1_KQ983255v1_alt	64292	73500	chr1_KQ983255v1_alt:64292-73500	3	+	69309	73168	789624	4	78,309,582,894,	0,5001,5982,8314,
#Deleted in new
chr1_KQ983255v1_alt	66468	73500	chr1_KQ983255v1_alt:66468-73500	1	+	69309	73168	789624	4	55,309,582,894,	0,2825,3806,6138,
#Deleted in new
chr1_KQ983255v1_alt	90794	93587	chr1_KQ983255v1_alt:90794-93587	7	-	90794	90794	16724991	3	584,576,287,	0,1534,2506,
#Deleted in new
chr1_KQ983255v1_alt	100018	101305	chr1_KQ983255v1_alt:100018-101305	7	-	100018	100018	16724991	2	579,312,	0,975,
#Deleted in new
chr1_KQ983255v1_alt	111111	112470	chr1_KQ983255v1_alt:111111-112470	3	-	111134	112016	789624	2	1086,62,	0,1297,
#Deleted in new
chr1_KQ983255v1_alt	124433	127231	chr1_KQ983255v1_alt:124433-127231	7	+	124433	124433	16724991	3	287,576,589,	0,683,2209,
#Deleted in new
chr1_KQ983255v1_alt	125408	127025	chr1_KQ983255v1_alt:125408-127025	4	+	125408	125408	16724991	2	284,383,	0,1234,
#Deleted in new
chr1_KQ983255v1_alt	142596	143076	chr1_KQ983255v1_alt:142596-143076	3	-	142596	142596	8553170	2	260,124,	0,356,
#Deleted in new
chr1_KQ983255v1_alt	144520	151577	chr1_KQ983255v1_alt:144520-151577	3	-	144852	148711	5263520	4	894,582,309,78,	0,2644,3898,6979,
#Deleted in new
chr1_KQ983255v1_alt	160201	161083	chr1_KQ983255v1_alt:160201-161083	3	-	160201	161083	789624	1	882,	0,
#Deleted in new
chr1_KQ983255v1_alt	168070	175080	chr1_KQ983255v1_alt:168070-175080	3	+	170896	174748	789624	4	78,309,582,894,	0,2810,3786,6116,
#Deleted in new
chr1_KQ983255v1_alt	211718	214508	chr1_KQ983255v1_alt:211718-214508	7	+	211718	211718	16724991	3	287,576,508,	0,683,2282,
#Deleted in new
chr1_KQ983255v1_alt	220067	229170	chr1_KQ983255v1_alt:220067-229170	3	+	225124	228967	789624	4	64,309,582,765,	0,5035,6010,8338,
#Deleted in new
chr1_KQ983255v1_alt	239394	241483	chr1_KQ983255v1_alt:239394-241483	7	-	239394	239394	16724991	2	573,495,	0,1594,
#Deleted in new
chr1_KQ983255v1_alt	244980	245087	chr1_KQ983255v1_alt:244980-245087	3	-	244980	244980	8553170	1	107,	0,
#Deleted in new
chr1_KQ983255v1_alt	246890	251010	chr1_KQ983255v1_alt:246890-251010	3	-	247226	249947	789624	4	898,576,312,58,	0,1812,2770,4062,
#Deleted in new
chr1_KQ983255v1_alt	247023	250025	chr1_KQ983255v1_alt:247023-250025	1	-	247226	249947	789624	3	765,576,365,	0,1679,2637,
#Deleted in new
chr1_KQ983255v1_alt	247157	251030	chr1_KQ983255v1_alt:247157-251030	1	-	247226	249947	789624	4	631,576,287,98,	0,1545,2503,3775,
#Deleted in new
chr1_KQ983255v1_alt	264167	264539	chr1_KQ983255v1_alt:264167-264539	1	+	264167	264539	789624	1	372,	0,
#Deleted in new
chr1_KQ983255v1_alt	264167	264539	chr1_KQ983255v1_alt:264167-264539	3	+	264167	264539	789624	1	372,	0,
#Deleted in new
chr1_KQ983255v1_alt	269394	274763	chr1_KQ983255v1_alt:269394-274763	3	+	271810	274743	789624	4	48,312,579,579,	0,2391,3099,4790,
#Deleted in new
chr1_KV880763v1_alt	52438	86695	chr1_KV880763v1_alt:52438-86695	3	+	52438	52438	8553170	5	117,187,154,149,127,	0,1475,31221,32286,34130,
#Deleted in new
chr1_KV880763v1_alt	62554	88196	chr1_KV880763v1_alt:62554-88196	1	+	62554	62554	8553170	5	357,151,154,149,1628,	0,1932,21105,22170,24014,
#Deleted in new
chr1_KV880763v1_alt	62556	84198	chr1_KV880763v1_alt:62556-84198	1	+	62556	62556	8553170	2	355,539,	0,21103,
#Deleted in new
chr1_KV880763v1_alt	71219	86694	chr1_KV880763v1_alt:71219-86694	0	+	71219	71219	8553170	4	405,154,149,126,	0,12440,13505,15349,
#Deleted in new
chr1_KV880763v1_alt	84546	86669	chr1_KV880763v1_alt:84546-86669	0	+	84546	84546	8553170	2	327,101,	0,2022,
#Deleted in new
chr1_KV880763v1_alt	146178	212528	chr1_KV880763v1_alt:146178-212528	3	-	148795	212308	0	10	2802,151,168,108,153,159,112,88,127,403,	0,5024,9508,14244,20974,23449,27171,47920,51805,65947,
#Deleted in new
chr1_KV880763v1_alt	146962	212449	chr1_KV880763v1_alt:146962-212449	0	-	173438	212308	789624	9	2018,151,168,108,153,159,112,127,324,	0,4240,8724,13460,20190,22665,26387,51021,65163,
#Deleted in new
chr1_KV880763v1_alt	146965	204988	chr1_KV880763v1_alt:146965-204988	1	-	148795	204791	0	10	2015,151,168,108,153,159,112,88,127,323,	0,4237,8721,13457,20187,22662,26384,47133,51018,57700,
#Deleted in new
chr1_KV880763v1_alt	147011	212489	chr1_KV880763v1_alt:147011-212489	0	-	168907	212308	8553170	11	1969,151,168,108,102,185,159,112,88,127,364,	0,4191,8675,13411,20141,21855,22616,26338,47087,50972,65114,
#Deleted in new
chr1_KV880763v1_alt	210662	213019	chr1_KV880763v1_alt:210662-213019	1	-	212098	212308	789624	1	2357,	0,
#Deleted in new
chr1_KV880763v1_alt	212095	213661	chr1_KV880763v1_alt:212095-213661	3	+	212095	212095	8553170	1	1566,	0,
#Deleted in new
chr1_KV880763v1_alt	212582	214913	chr1_KV880763v1_alt:212582-214913	3	+	212582	212582	8553170	1	2331,	0,
#Deleted in new
chr1_KV880763v1_alt	485122	485850	chr1_KV880763v1_alt:485122-485850	7	+	485122	485122	16724991	4	318,108,142,101,	0,319,428,627,
#Deleted in new
chr1_KV880763v1_alt	500097	500472	chr1_KV880763v1_alt:500097-500472	1	+	500097	500472	789624	1	375,	0,
#Deleted in new
chr1_KV880763v1_alt	500097	500472	chr1_KV880763v1_alt:500097-500472	3	+	500097	500472	789624	1	375,	0,
#Deleted in new
chr1_KV880763v1_alt	507052	512721	chr1_KV880763v1_alt:507052-512721	7	-	507052	507052	16724991	2	159,126,	0,5543,
#Deleted in new
chr1_KV880763v1_alt	513955	515053	chr1_KV880763v1_alt:513955-515053	7	+	513955	513955	16724991	1	1098,	0,
#Deleted in new
chr1_KV880763v1_alt	520169	520839	chr1_KV880763v1_alt:520169-520839	7	+	520169	520169	16724991	1	670,	0,
#Deleted in new
chr1_KZ208904v1_alt	29752	31749	chr1_KZ208904v1_alt:29752-31749	1	+	29827	31441	789624	3	162,92,345,	0,252,1652,
#Deleted in new
chr1_KZ208904v1_alt	29776	31744	chr1_KZ208904v1_alt:29776-31744	3	+	29827	31622	789624	3	138,92,264,	0,228,1704,
#Deleted in new
chr1_KZ208904v1_alt	29785	40550	chr1_KZ208904v1_alt:29785-40550	1	+	29827	40281	789624	3	129,92,318,	0,219,10447,
#Deleted in new
chr1_KZ208904v1_alt	29797	31742	chr1_KZ208904v1_alt:29797-31742	1	+	29827	30100	789624	2	117,1738,	0,207,
#Deleted in new
chr1_KZ208904v1_alt	33152	35097	chr1_KZ208904v1_alt:33152-35097	3	-	33152	33152	8553170	1	1945,	0,
#Deleted in new
chr1_KZ208904v1_alt	40787	41212	chr1_KZ208904v1_alt:40787-41212	3	+	40787	40787	8553170	1	425,	0,
#Deleted in new
chr1_KZ208904v1_alt	53170	76135	chr1_KZ208904v1_alt:53170-76135	3	+	53491	74446	0	10	411,66,198,183,213,151,119,191,145,1776,	0,9656,12147,12757,13054,13831,14513,15298,19570,21189,
#Deleted in new
chr1_KZ208904v1_alt	122645	128660	chr1_KZ208904v1_alt:122645-128660	0	+	122645	122645	8553170	3	123,139,600,	0,1595,5415,
#Deleted in new
chr1_KZ208904v1_alt	122681	129611	chr1_KZ208904v1_alt:122681-129611	3	+	124306	128614	789624	3	143,139,1551,	0,1559,5379,
#Deleted in new
chr1_KZ208904v1_alt	122698	129608	chr1_KZ208904v1_alt:122698-129608	1	+	124306	128614	789624	4	126,139,670,171,	0,1542,5362,6739,
#Deleted in new
chr1_KZ208904v1_alt	122705	124436	chr1_KZ208904v1_alt:122705-124436	0	+	122705	122705	8553170	2	119,196,	0,1535,
#Deleted in new
chr1_KZ208904v1_alt	123926	128229	chr1_KZ208904v1_alt:123926-128229	0	+	123926	123926	8553170	3	93,139,169,	0,314,4134,
#Deleted in new
chr1_KZ208905v1_alt	13738	14096	chr1_KZ208905v1_alt:13738-14096	7	+	13738	13738	16724991	1	358,	0,
#Deleted in new
chr1_KZ208906v1_fix	16043	16524	chr1_KZ208906v1_fix:16043-16524	3	-	16113	16524	0	1	481,	0,
#Deleted in new
chr1_KZ208906v1_fix	40361	40820	chr1_KZ208906v1_fix:40361-40820	7	-	40361	40361	16724991	1	459,	0,
#Deleted in new
chr1_KZ208906v1_fix	48177	49072	chr1_KZ208906v1_fix:48177-49072	3	-	48623	49016	789624	1	895,	0,
#Deleted in new
chr1_KZ208906v1_fix	49305	51669	chr1_KZ208906v1_fix:49305-51669	3	+	49328	49709	0	1	2364,	0,
#Deleted in new
chr1_KZ208906v1_fix	53272	53351	chr1_KZ208906v1_fix:53272-53351	3	+	53272	53272	5263520	1	79,	0,
#Deleted in new
chr1_KZ208906v1_fix	55301	55825	chr1_KZ208906v1_fix:55301-55825	7	-	55301	55301	16724991	1	524,	0,
#Deleted in new
chr1_KZ208906v1_fix	77386	78319	chr1_KZ208906v1_fix:77386-78319	3	-	77386	77386	8553170	1	933,	0,
#Deleted in new
chr1_KZ208906v1_fix	78259	86965	chr1_KZ208906v1_fix:78259-86965	3	+	78687	85084	789624	4	818,93,222,1884,	0,1899,5992,6822,
#Deleted in new
chr1_KZ208906v1_fix	78687	85084	chr1_KZ208906v1_fix:78687-85084	1	+	78687	85084	789624	4	390,93,222,3,	0,1471,5564,6394,
#Deleted in new
chr1_KZ208906v1_fix	79420	86965	chr1_KZ208906v1_fix:79420-86965	0	+	79420	79420	8553170	4	264,97,222,1884,	0,738,4831,5661,
#Deleted in new
chr1_KZ208906v1_fix	101623	103504	chr1_KZ208906v1_fix:101623-103504	7	-	101623	101623	16724991	3	254,354,87,	0,1226,1794,
#Deleted in new
chr1_KZ208906v1_fix	101734	103449	chr1_KZ208906v1_fix:101734-103449	4	-	101734	101734	16724991	3	143,354,68,	0,1115,1647,
#Deleted in new
chr1_KZ208906v1_fix	149484	149603	chr1_KZ208906v1_fix:149484-149603	3	-	149484	149484	8553170	1	119,	0,
#Deleted in new
chr1_KZ208906v1_fix	151723	151842	chr1_KZ208906v1_fix:151723-151842	3	-	151723	151723	8553170	1	119,	0,
#Deleted in new
chr1_KZ208906v1_fix	212164	212283	chr1_KZ208906v1_fix:212164-212283	3	-	212164	212164	5263520	1	119,	0,
#Deleted in new
chr1_KZ208906v1_fix	221126	221245	chr1_KZ208906v1_fix:221126-221245	3	-	221126	221126	5263520	1	119,	0,
#Deleted in new
chr1_KZ208906v1_fix	223368	223487	chr1_KZ208906v1_fix:223368-223487	3	-	223368	223368	5263520	1	119,	0,
#Deleted in new
chr1_KZ208906v1_fix	225238	225359	chr1_KZ208906v1_fix:225238-225359	7	-	225238	225238	16724991	1	121,	0,
#Deleted in new
chr1_KZ208906v1_fix	227567	228706	chr1_KZ208906v1_fix:227567-228706	7	+	227567	227567	16724991	1	1139,	0,
#Deleted in new
chr1_KZ208906v1_fix	229762	229887	chr1_KZ208906v1_fix:229762-229887	3	+	229762	229762	8553170	1	125,	0,
#Deleted in new
chr1_KZ208906v1_fix	254906	255091	chr1_KZ208906v1_fix:254906-255091	7	-	254906	254906	16724991	2	45,138,	0,47,
#Deleted in new
chr1_KZ208906v1_fix	264416	264828	chr1_KZ208906v1_fix:264416-264828	7	+	264416	264416	16724991	1	412,	0,
#Deleted in new
chr1_KZ208906v1_fix	312080	323673	chr1_KZ208906v1_fix:312080-323673	3	+	312746	320744	0	3	928,59,3385,	0,2596,8208,
#Deleted in new
chr2	38813	46385	chr2:38813-46385	3	-	41607	46385	789624	2	2814,946,	0,6626,
#Deleted in new
chr2	41219	42952	chr2:41219-42952	0	-	41219	41219	8553170	2	408,144,	0,1589,
#Deleted in new
chr2	41220	46870	chr2:41220-46870	0	-	41220	41220	8553170	2	407,64,	0,5586,
#Deleted in new
chr2	197568	202605	chr2:197568-202605	3	+	197568	197568	8553170	2	2333,2442,	0,2595,
#Deleted in new
chr2	217729	218866	chr2:217729-218866	0	-	217729	217729	8553170	2	379,121,	0,1016,
#Partially deleted in new
chr2	218135	264032	chr2:218135-264032	1	-	218810	263984	0	9	866,79,169,129,113,65,114,111,49,	0,11830,12887,14965,16024,29402,31595,34869,45848,
#Partially deleted in new
chr2	218148	264392	chr2:218148-264392	0	-	218148	218148	789624	10	853,57,79,169,129,113,65,114,111,309,	0,6715,11817,12874,14952,16011,29389,31582,34856,45935,
#Partially deleted in new
chr2	218148	264158	chr2:218148-264158	1	-	218810	242800	0	13	853,57,79,169,129,113,74,60,65,114,111,134,15,	0,6715,11817,12874,14952,16011,24649,25354,29389,31582,34856,38058,45995,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	218150	261323	chr2:218150-261323	1	-	218810	242800	0	12	851,79,169,129,113,74,112,65,114,111,484,1239,	0,11815,12872,14950,16009,24647,26476,29387,31580,34854,38056,41934,
#Partially deleted in new
chr2	218152	264179	chr2:218152-264179	3	-	218810	262631	0	12	849,57,79,169,129,113,65,114,111,120,162,96,	0,6711,11813,12870,14948,16007,29385,31578,34852,44478,45058,45931,
#Partially deleted in new
chr2	218152	262786	chr2:218152-262786	0	-	218152	218152	789624	11	849,79,169,129,113,60,65,114,111,618,156,	0,11813,12870,14948,16007,25350,29385,31578,34852,41932,44478,
#Partially deleted in new
chr2	218157	264065	chr2:218157-264065	1	-	218810	263984	0	10	844,57,79,169,129,113,65,114,111,82,	0,6706,11808,12865,14943,16002,29380,31573,34847,45826,
#Partially deleted in new
chr2	218665	264810	chr2:218665-264810	1	-	218810	242800	0	11	336,79,169,129,113,74,60,65,114,111,29,	0,11300,12357,14435,15494,24132,24837,28872,31065,34339,46116,
#Partially deleted in new
chr2	218772	264743	chr2:218772-264743	0	-	218772	218772	789624	12	229,57,79,169,129,113,65,114,111,1046,586,41,	0,6091,11193,12250,14328,15387,28765,30958,34232,41312,43428,45930,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	218779	260708	chr2:218779-260708	0	-	230968	242800	789624	11	222,79,645,129,113,74,60,65,114,111,624,	0,11186,11767,14321,15380,24018,24723,28758,30951,34225,41305,
#Partially deleted in new
chr2	218796	253041	chr2:218796-253041	0	-	218810	253041	789624	7	205,79,169,113,65,114,37,	0,11169,12226,15363,28741,30934,34208,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	222360	231159	chr2:222360-231159	0	-	222360	222360	8553170	4	594,53,79,137,	0,2507,7605,8662,
#Partially deleted in new
chr2	229893	253113	chr2:229893-253113	0	-	229921	253113	789624	6	151,169,113,65,114,109,	0,1129,4266,17644,19837,23111,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	230377	263983	chr2:230377-263983	0	-	230377	230377	8553170	7	814,129,113,65,114,111,773,	0,2723,3782,17160,19353,22627,32833,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	230378	234231	chr2:230378-234231	0	-	230968	234231	789624	2	813,72,	0,3781,
#Partially deleted in new
chr2	231136	264866	chr2:231136-264866	0	-	231136	231136	8553170	7	55,129,113,65,114,111,85,	0,1964,3023,16401,18594,21868,33645,
#Partially deleted in new
chr2	232914	249770	chr2:232914-249770	0	-	232914	232914	8553170	4	315,113,65,40,	0,1245,14623,16816,
#Partially deleted in new
chr2	233118	264568	chr2:233118-264568	0	-	233118	233118	8553170	6	111,113,65,114,111,27,	0,1041,14419,16612,19886,31423,
#Partially deleted in new
chr2	233122	264810	chr2:233122-264810	0	-	233122	233122	8553170	7	107,113,60,65,114,111,29,	0,1037,10380,14415,16608,19882,31659,
#Partially deleted in new
chr2	233168	264824	chr2:233168-264824	0	-	233168	242800	789624	7	61,113,74,65,114,111,43,	0,991,9629,14369,16562,19836,31613,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	239560	264810	chr2:239560-264810	1	-	243508	262631	0	7	2616,60,65,114,111,156,29,	0,3942,7977,10170,13444,23070,25221,
#Partially deleted in new
chr2	249804	264810	chr2:249804-264810	0	-	249804	262631	789624	5	40,111,156,158,29,	0,3200,12826,13406,14977,
#Deleted in new
chr2	255875	256377	chr2:255875-256377	0	-	255875	255875	8553170	1	502,	0,
#Deleted in new
chr2	259422	260292	chr2:259422-260292	0	-	259422	259422	8553170	1	870,	0,
#Deleted in new
chr2	260256	266398	chr2:260256-266398	0	-	260256	260256	8553170	2	464,105,	0,6037,
#Deleted in new
chr2	260342	264810	chr2:260342-264810	0	-	260342	260342	8553170	3	360,162,29,	0,2868,4439,
#Deleted in new
chr2	260511	264810	chr2:260511-264810	0	-	260511	260511	8553170	4	191,162,199,29,	0,2699,3052,4270,
#Deleted in new
chr2	260803	264810	chr2:260803-264810	0	-	260803	260803	8553170	4	94,156,162,29,	0,1827,2407,3978,
#Deleted in new
chr2	264139	264922	chr2:264139-264922	0	+	264139	264139	8553170	2	359,200,	0,583,
#Partially deleted in new
chr2	264868	278283	chr2:264868-278283	1	+	264964	277304	0	6	139,74,114,62,106,1057,	0,6997,7323,10271,12111,12358,
#Partially deleted in new
chr2	264871	278283	chr2:264871-278283	3	+	264964	277304	0	6	136,74,114,62,106,1057,	0,6994,7165,10268,12108,12355,
#Partially deleted in new
chr2	264892	277506	chr2:264892-277506	0	+	264964	276991	789624	5	115,74,114,106,280,	0,6973,7144,12087,12334,
#Partially deleted in new
chr2	264899	272557	chr2:264899-272557	1	+	264964	272258	0	3	108,74,521,	0,6966,7137,
#Partially deleted in new
chr2	264899	277261	chr2:264899-277261	0	+	264964	271916	789624	7	108,47,74,114,62,106,35,	0,4401,6966,7137,10240,12080,12327,
#Partially deleted in new
chr2	264915	272630	chr2:264915-272630	1	+	264964	272332	789624	3	92,74,439,	0,6950,7276,
#Partially deleted in new
chr2	264918	275200	chr2:264918-275200	0	+	264964	271916	789624	6	89,47,74,29,114,61,	0,4382,6947,7118,7273,10221,
#Partially deleted in new
chr2	264925	273155	chr2:264925-273155	1	+	264964	272258	789624	4	82,74,29,964,	0,6940,7111,7266,
#Partially deleted in new
chr2	264935	275611	chr2:264935-275611	0	+	264935	264935	8553170	4	72,74,114,472,	0,6930,7101,10204,
#Partially deleted in new
chr2	264964	277375	chr2:264964-277375	0	+	264964	272258	789624	7	43,74,29,114,62,106,149,	0,6901,7072,7227,10175,12015,12262,
#Partially deleted in new
chr2	265204	277369	chr2:265204-277369	0	+	265204	265204	8553170	6	74,74,114,62,106,143,	0,6661,6832,9935,11775,12022,
#Deleted in new
chr2	274572	277506	chr2:274572-277506	0	+	274572	274572	8553170	3	629,106,280,	0,2407,2654,
#Partially deleted in new
chr2	279557	288296	chr2:279557-288296	3	-	280146	287835	789624	6	595,65,81,54,310,284,	0,3553,6565,6732,8025,8455,
#Partially deleted in new
chr2	279765	287323	chr2:279765-287323	1	-	280146	286320	789624	5	387,65,81,54,161,	0,3345,6357,6524,7397,
#Partially deleted in new
chr2	279928	287687	chr2:279928-287687	0	-	280146	287687	789624	5	221,65,81,54,105,	0,3182,6194,6361,7654,
#Partially deleted in new
chr2	279928	287299	chr2:279928-287299	1	-	280146	286320	789624	5	221,65,81,54,137,	0,3182,6194,6361,7234,
#Partially deleted in new
chr2	279928	287837	chr2:279928-287837	1	-	280146	287835	789624	6	221,65,81,54,25,50,	0,3182,6194,6361,7654,7859,
#Partially deleted in new
chr2	279950	286919	chr2:279950-286919	1	-	280146	286320	789624	5	199,65,81,54,50,	0,3160,6172,6339,6919,
#Partially deleted in new
chr2	283110	288851	chr2:283110-288851	0	-	283110	287835	789624	5	65,81,54,310,299,	0,3012,3179,4472,5442,
#Deleted in new
chr2	285938	287345	chr2:285938-287345	0	-	285938	285938	8553170	2	405,183,	0,1224,
#Deleted in new
chr2	286418	287496	chr2:286418-287496	0	+	286418	286418	8553170	2	206,488,	0,590,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	286566	301515	chr2:286566-301515	3	+	286566	286566	8553170	4	58,106,74,154,	0,442,4111,14795,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	305110	307180	chr2:305110-307180	1	-	305110	305110	8553170	2	1130,70,	0,2000,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	305472	306596	chr2:305472-306596	0	-	305472	305472	8553170	2	768,43,	0,1081,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	305474	306522	chr2:305474-306522	0	-	305474	305474	8553170	2	766,39,	0,1009,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	305494	307783	chr2:305494-307783	0	-	305494	305494	8553170	2	746,43,	0,2246,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	305559	307153	chr2:305559-307153	0	-	305559	305559	8553170	2	681,76,	0,1518,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	305624	306491	chr2:305624-306491	0	-	305624	305624	8553170	2	616,43,	0,824,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	305840	307157	chr2:305840-307157	0	-	305840	305840	8553170	2	400,45,	0,1272,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	305840	308267	chr2:305840-308267	0	-	305840	305840	8553170	2	400,141,	0,2286,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	305840	309183	chr2:305840-309183	0	-	305840	305840	8553170	2	400,284,	0,3059,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	305842	306837	chr2:305842-306837	0	-	305842	305842	8553170	2	398,43,	0,952,
#Deleted in new
chr2	306058	309379	chr2:306058-309379	0	-	306058	306058	8553170	2	182,408,	0,2913,
#Deleted in new
chr2	306224	314337	chr2:306224-314337	0	-	306224	306224	8553170	5	16,413,285,201,95,	0,2712,3990,6732,8018,
#Deleted in new
chr2	306224	310334	chr2:306224-310334	0	-	306224	306224	8553170	3	16,471,120,	0,2712,3990,
#Deleted in new
chr2	306224	314048	chr2:306224-314048	0	-	306224	306224	8553170	4	16,413,285,175,	0,2712,3990,7649,
#Deleted in new
chr2	306224	313163	chr2:306224-313163	0	-	306224	306224	8553170	4	16,413,285,211,	0,2712,3990,6728,
#Deleted in new
chr2	307682	309424	chr2:307682-309424	3	+	307682	307682	8553170	2	62,486,	0,1256,
#Deleted in new
chr2	308832	314367	chr2:308832-314367	0	-	308832	308832	8553170	3	575,179,125,	0,1382,5410,
#Deleted in new
chr2	308832	314367	chr2:308832-314367	0	-	308832	308832	8553170	4	575,179,201,125,	0,1382,4124,5410,
#Deleted in new
chr2	308911	314345	chr2:308911-314345	1	-	308911	308911	8553170	5	438,179,201,19,103,	0,1303,4045,4962,5331,
#Deleted in new
chr2	308950	314107	chr2:308950-314107	0	-	308950	308950	8553170	3	457,179,234,	0,1264,4923,
#Deleted in new
chr2	308971	314101	chr2:308971-314101	0	-	308971	308971	8553170	3	378,179,228,	0,1243,4902,
#Deleted in new
chr2	308971	311657	chr2:308971-311657	0	-	308971	308971	8553170	3	378,285,170,	0,1243,2516,
#Deleted in new
chr2	308980	314328	chr2:308980-314328	0	-	308980	308980	8553170	4	427,179,11,86,	0,1234,4893,5262,
#Deleted in new
chr2	308986	314360	chr2:308986-314360	0	-	308986	308986	8553170	3	421,285,118,	0,1228,5256,
#Deleted in new
chr2	309000	314328	chr2:309000-314328	0	-	309000	309000	8553170	5	349,179,201,11,86,	0,1214,3956,4873,5242,
#Deleted in new
chr2	309022	314110	chr2:309022-314110	0	-	309022	309022	8553170	4	327,179,201,237,	0,1192,3934,4851,
#Deleted in new
chr2	309030	314360	chr2:309030-314360	2	-	309030	309030	8553170	4	319,179,201,118,	0,1184,3926,5212,
#Deleted in new
chr2	309119	314328	chr2:309119-314328	1	-	309119	309119	8553170	4	288,285,201,86,	0,1095,3837,5123,
#Deleted in new
chr2	309217	314358	chr2:309217-314358	0	-	309217	309217	8553170	5	190,285,201,19,116,	0,997,3739,4656,5025,
#Deleted in new
chr2	309220	314049	chr2:309220-314049	0	-	309220	309220	8553170	3	187,285,176,	0,994,4653,
#Deleted in new
chr2	310295	314266	chr2:310295-314266	0	-	310295	310295	8553170	3	204,201,393,	0,2661,3578,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	317911	336465	chr2:317911-336465	1	+	317911	317911	8553170	2	152,693,	0,17861,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	318052	342118	chr2:318052-342118	3	+	318052	318052	8553170	4	11,182,108,552,	0,17720,21775,23514,
#Partially deleted in new
chr2	388411	416885	chr2:388411-416885	3	+	388411	388411	8553170	2	186,363,	0,28111,
#Deleted in new
chr2	421056	422156	chr2:421056-422156	0	+	421056	421056	8553170	2	105,319,	0,781,
#Deleted in new
chr2	421132	422303	chr2:421132-422303	3	+	421132	421132	8553170	2	132,466,	0,705,
#Deleted in new
chr2	490943	492655	chr2:490943-492655	3	-	490943	490943	789624	2	375,135,	0,1577,
#Deleted in new
chr2	495730	496633	chr2:495730-496633	3	+	495730	495730	8553170	2	208,521,	0,382,
#Deleted in new
chr2	545804	546667	chr2:545804-546667	3	+	545804	545804	789624	2	232,428,	0,435,
#Partially deleted in new
chr2	558203	578145	chr2:558203-578145	3	+	558203	558203	8553170	5	74,252,63,229,144,	0,530,1874,2093,19798,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	667334	677439	chr2:667334-677439	3	-	669579	677345	789624	5	2341,94,55,121,151,	0,2422,5473,8175,9954,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	667972	677406	chr2:667972-677406	0	-	676094	677345	789624	6	1703,94,55,121,481,118,	0,1784,4835,7537,7785,9316,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	667974	676162	chr2:667974-676162	1	-	669579	675775	789624	5	1701,94,55,121,405,	0,1782,4833,7535,7783,
#Deleted in new
chr2	669188	670975	chr2:669188-670975	0	-	669188	669188	8553170	2	487,1219,	0,568,
#Deleted in new
chr2	669210	676662	chr2:669210-676662	0	-	669210	669210	8553170	4	465,94,55,1153,	0,546,3597,6299,
#Deleted in new
chr2	669422	676704	chr2:669422-676704	1	-	669579	676639	789624	5	253,94,55,121,131,	0,334,3385,6087,7151,
#Deleted in new
chr2	675557	676642	chr2:675557-676642	0	-	676113	676628	789624	3	73,481,69,	0,200,1016,
#Deleted in new
chr2	675608	676787	chr2:675608-676787	0	-	675608	675608	8553170	2	630,214,	0,965,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	677185	682802	chr2:677185-682802	3	+	677185	677185	8553170	3	288,108,1547,	0,2858,4070,
#Partially deleted in new
chr2	680080	697371	chr2:680080-697371	0	+	680080	680080	8553170	3	71,130,225,	0,16460,17066,
#Deleted in new
chr2	687798	688348	chr2:687798-688348	3	+	687798	687798	8553170	1	550,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	692082	693235	chr2:692082-693235	3	-	692082	692082	8553170	2	374,197,	0,956,
#Partially deleted in new
chr2	724965	731195	chr2:724965-731195	3	-	724965	724965	8553170	2	317,176,	0,6054,
#Partially deleted in new
chr2	729305	731224	chr2:729305-731224	1	-	729305	729305	8553170	2	184,205,	0,1714,
#Deleted in new
chr2	739587	740164	chr2:739587-740164	3	-	739587	739587	8553170	1	577,	0,
#Deleted in new
chr2	741976	749856	chr2:741976-749856	3	+	741976	741976	8553170	2	133,123,	0,7757,
#Deleted in new
chr2	742487	747767	chr2:742487-747767	3	+	742487	742487	8553170	2	425,110,	0,5170,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	779839	868426	chr2:779839-868426	3	-	779839	779839	789624	4	752,221,237,309,	0,26189,74139,88278,
#Partially deleted in new
chr2	780350	868191	chr2:780350-868191	0	-	780350	780350	8553170	3	241,221,74,	0,25678,87767,
#Deleted in new
chr2	910925	921124	chr2:910925-921124	3	-	910925	910925	8553170	2	477,112,	0,10087,
#Deleted in new
chr2	949626	950274	chr2:949626-950274	3	-	949626	949626	8553170	2	175,364,	0,284,
#Partially deleted in new
chr2	950867	1367613	chr2:950867-1367613	3	+	950996	1367474	789624	17	201,138,57,58,44,42,88,92,128,130,39,117,72,207,93,111,271,	0,132650,147328,147485,186754,186900,214680,222224,258235,287020,288870,296459,308502,316497,357626,365397,416475,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	950867	1161671	chr2:950867-1161671	0	+	950996	1137648	789624	8	201,138,57,58,38,44,42,1240,	0,132650,147328,147485,152537,186754,186900,209564,
#Partially deleted in new
chr2	950938	1367613	chr2:950938-1367613	1	+	950996	1367474	789624	11	130,138,128,130,39,117,72,207,93,111,271,	0,132579,258164,286949,288799,296388,308431,316426,357555,365326,416404,
#Partially deleted in new
chr2	1059132	1068341	chr2:1059132-1068341	3	-	1059132	1059132	8553170	2	217,215,	0,8994,
#Deleted in new
chr2	1158309	1160424	chr2:1158309-1160424	3	-	1158309	1158309	8553170	3	177,81,278,	0,1029,1837,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	1163246	1220057	chr2:1163246-1220057	0	+	1163246	1163246	8553170	6	43,88,92,128,223,176,	0,2301,9845,45856,47210,56635,
#Partially deleted in new
chr2	1163246	1220057	chr2:1163246-1220057	0	+	1163246	1163246	8553170	4	43,88,92,176,	0,2301,9845,56635,
#Partially deleted in new
chr2	1163562	1242785	chr2:1163562-1242785	0	+	1163562	1163562	8553170	6	163,88,92,128,39,48,	0,1985,9529,45540,76175,79175,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	1209128	1220057	chr2:1209128-1220057	0	+	1209128	1209128	8553170	3	102,223,176,	0,1328,10753,
#Partially deleted in new
chr2	1247324	1256604	chr2:1247324-1256604	0	+	1247324	1247324	8553170	2	119,200,	0,9080,
#Partially deleted in new
chr2	1262843	1367448	chr2:1262843-1367448	0	+	1262843	1262843	8553170	5	106,207,93,111,106,	0,4521,45650,53421,104499,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	1341043	1346568	chr2:1341043-1346568	3	-	1341043	1341043	8553170	2	656,194,	0,5331,
#Partially deleted in new
chr2	1353687	1367613	chr2:1353687-1367613	0	+	1353687	1353687	8553170	2	177,271,	0,13655,
#Partially deleted in new
chr2	1366233	1580747	chr2:1366233-1580747	3	-	1366233	1366233	8553170	4	1260,219,99,547,	0,43295,52129,213967,
#Partially deleted in new
chr2	1374065	1409266	chr2:1374065-1409266	0	+	1374065	1374065	8553170	4	337,96,64,1295,	0,29937,32927,33906,
#Partially deleted in new
chr2	1374222	1542822	chr2:1374222-1542822	0	+	1374222	1374222	8553170	6	180,259,238,132,100,402,	0,110373,119579,129725,142660,168198,
#Partially deleted in new
chr2	1413460	1542726	chr2:1413460-1542726	3	+	1414408	1542474	789624	17	90,95,85,170,133,130,207,519,259,171,238,209,171,132,100,130,306,	0,947,9584,19977,22791,40233,42615,63625,71135,74360,80341,82528,83134,90487,103422,127133,128960,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	1413460	1439402	chr2:1413460-1439402	1	+	1414408	1438858	789624	6	85,95,85,170,133,587,	0,947,9584,19977,22791,25355,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	1413460	1439399	chr2:1413460-1439399	1	+	1414408	1438858	789624	6	90,95,85,170,133,584,	0,947,9584,19977,22791,25355,
#Partially deleted in new
chr2	1413463	1542727	chr2:1413463-1542727	1	+	1414408	1542474	789624	17	82,95,85,170,133,130,207,519,259,171,238,209,171,132,100,130,307,	0,944,9581,19974,22788,40230,42612,63622,71132,74357,80338,82525,83131,90484,103419,127130,128957,
#Partially deleted in new
chr2	1413479	1542727	chr2:1413479-1542727	1	+	1414408	1542474	789624	16	71,95,85,170,133,130,207,519,259,238,209,171,132,100,130,307,	0,928,9565,19958,22772,40214,42596,63606,71116,80322,82509,83115,90468,103403,127114,128941,
#Partially deleted in new
chr2	1414381	1453726	chr2:1414381-1453726	0	+	1414408	1453726	789624	5	121,85,170,133,33,	0,8663,19056,21870,39312,
#Partially deleted in new
chr2	1414407	1542726	chr2:1414407-1542726	1	+	1414408	1542474	789624	15	95,85,170,133,130,207,519,259,171,238,209,171,100,130,306,	0,8637,19030,21844,39286,41668,62678,70188,73413,79394,81581,82187,102475,126186,128013,
#Partially deleted in new
chr2	1414408	1542474	chr2:1414408-1542474	1	+	1414408	1542474	789624	15	94,85,170,133,130,207,259,171,238,209,171,132,100,130,54,	0,8636,19029,21843,39285,41667,70187,73412,79393,81580,82186,89539,102474,126185,128012,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	1433471	1543711	chr2:1433471-1543711	0	+	1433471	1540915	789624	12	136,133,130,207,519,259,171,238,209,171,100,3118,	0,2780,20222,22604,43614,51124,54349,60330,62517,63123,83411,107122,
#Partially deleted in new
chr2	1484662	1542660	chr2:1484662-1542660	0	+	1484662	1542592	789624	7	192,238,209,171,132,100,240,	0,9139,11326,11932,19285,32220,57758,
#Partially deleted in new
chr2	1484664	1542649	chr2:1484664-1542649	0	+	1484664	1542474	789624	7	190,238,209,171,100,130,229,	0,9137,11324,11930,32218,55929,57756,
#Partially deleted in new
chr2	1484668	1516982	chr2:1484668-1516982	0	+	1484668	1484668	8553170	3	186,238,100,	0,9133,32214,
#Partially deleted in new
chr2	1503776	1542727	chr2:1503776-1542727	0	+	1503776	1503776	8553170	5	49,132,100,130,307,	0,171,13106,36817,38644,
#Partially deleted in new
chr2	1513432	1542529	chr2:1513432-1542529	0	+	1513432	1513432	8553170	3	172,100,109,	0,3450,28988,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	1552444	1554701	chr2:1552444-1554701	3	+	1552444	1552444	8553170	3	110,120,532,	0,293,1725,
#Partially deleted in new
chr2	1572553	1580311	chr2:1572553-1580311	0	-	1572553	1572553	8553170	2	444,111,	0,7647,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	1620509	1625419	chr2:1620509-1625419	3	-	1620509	1620509	8553170	2	1470,171,	0,4739,
#Partially deleted in new
chr2	1631886	1744506	chr2:1631886-1744506	3	-	1634203	1744455	789624	23	2437,114,133,121,209,135,1504,158,109,157,113,159,117,273,170,118,170,72,72,72,72,72,251,	0,3521,6959,7415,11481,12731,16285,21741,22513,28994,30185,31718,33071,34327,41756,45040,48306,51769,52193,55745,60041,61176,112369,
#Deleted in new
chr2	1633184	1637064	chr2:1633184-1637064	0	-	1633184	1633184	8553170	2	1139,1657,	0,2223,
#Partially deleted in new
chr2	1633891	1676507	chr2:1633891-1676507	0	-	1633891	1633891	8553170	15	432,114,133,121,209,135,158,109,157,113,1470,273,195,170,51,	0,1516,4954,5410,9476,10726,19736,20508,26989,28180,29713,32322,38147,39751,42565,
#Partially deleted in new
chr2	1633922	1643471	chr2:1633922-1643471	0	-	1635517	1643471	789624	4	401,114,121,104,	0,1485,5379,9445,
#Partially deleted in new
chr2	1643391	1646170	chr2:1643391-1646170	0	-	1643391	1643391	8553170	3	185,135,250,	0,1226,2529,
#Deleted in new
chr2	1649242	1653966	chr2:1649242-1653966	0	-	1649242	1649242	8553170	2	433,339,	0,4385,
#Deleted in new
chr2	1649364	1653980	chr2:1649364-1653980	0	-	1649364	1649364	8553170	3	311,158,65,	0,4263,4551,
#Partially deleted in new
chr2	1653075	1744442	chr2:1653075-1744442	0	-	1653547	1744442	789624	16	710,109,157,113,159,117,273,170,118,170,72,72,72,72,72,187,	0,1324,7805,8996,10529,11882,13138,20567,23851,27117,30580,31004,34556,38852,39987,91180,
#Partially deleted in new
chr2	1664990	1676496	chr2:1664990-1676496	0	-	1664990	1664990	8553170	4	84,273,170,40,	0,1223,8652,11466,
#Partially deleted in new
chr2	1666257	1676463	chr2:1666257-1676463	0	-	1666257	1666257	8553170	3	229,170,194,	0,7385,10012,
#Partially deleted in new
chr2	1676956	1692570	chr2:1676956-1692570	0	-	1676956	1692570	789624	7	88,170,72,72,72,72,42,	0,3236,6699,7123,10675,14971,15572,
#Partially deleted in new
chr2	1677029	1744502	chr2:1677029-1744502	0	-	1677029	1744455	789624	7	15,170,72,72,72,72,247,	0,3163,6626,7050,14898,16033,67226,
#Partially deleted in new
chr2	1680252	1744852	chr2:1680252-1744852	0	-	1680252	1680252	8553170	7	110,72,72,72,72,72,49,	0,3403,3827,7379,11675,12810,64551,
#Partially deleted in new
chr2	1789112	2331378	chr2:1789112-2331378	1	-	1791866	1979777	789624	25	2895,144,104,92,222,84,63,69,122,237,251,215,108,91,135,978,353,63,34,55,157,146,117,100,412,	0,3208,12583,19963,50036,51647,62528,97426,98375,100128,102924,113967,121127,122907,128092,133173,153869,190052,190408,190610,208078,264865,383759,495291,541854,
#Partially deleted in new
chr2	1789112	2326210	chr2:1789112-2326210	1	-	1791235	1979777	789624	25	2150,144,104,92,222,84,63,69,122,237,251,215,108,91,135,972,353,63,34,55,157,146,117,100,175,	0,3208,12583,19963,50036,51647,62528,97426,98375,100128,102924,113967,121127,122907,128092,133179,153869,190052,190408,190610,208078,264865,383759,495291,536923,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	1789116	1792901	chr2:1789116-1792901	0	-	1789116	1789116	8553170	2	2891,581,	0,3204,
#Partially deleted in new
chr2	1789123	2331348	chr2:1789123-2331348	1	-	1791866	1979777	789624	26	2884,144,104,92,222,84,63,69,63,122,237,251,215,108,91,135,978,353,63,34,55,157,146,117,100,382,	0,3197,12572,19952,50025,51636,62517,97415,97935,98364,100117,102913,113956,121116,122896,128081,133162,153858,190041,190397,190599,208067,264854,383748,495280,541843,
#Partially deleted in new
chr2	1789130	2331234	chr2:1789130-2331234	1	-	1791235	1979777	8553170	24	2132,144,110,92,222,84,63,69,122,237,251,215,108,91,135,353,63,34,55,157,146,117,100,268,	0,3190,12559,19945,50018,51629,62510,97408,98357,100110,102906,113949,121109,122889,128074,153851,190034,190390,190592,208060,264847,383741,495273,541836,
#Partially deleted in new
chr2	1789135	2331263	chr2:1789135-2331263	3	-	1791866	1979777	789624	25	2872,144,104,92,222,84,63,69,122,237,251,215,108,91,135,972,353,63,34,55,157,146,117,100,297,	0,3185,12560,19940,50013,51624,62505,97403,98352,100105,102901,113944,121104,122884,128069,133156,153846,190029,190385,190587,208055,264842,383736,495268,541831,
#Partially deleted in new
chr2	1789135	1842891	chr2:1789135-1842891	1	-	1791866	1839216	789624	7	2872,144,110,92,222,84,123,	0,3185,12554,19940,50013,51624,53633,
#Partially deleted in new
chr2	1789136	2324345	chr2:1789136-2324345	1	-	1792308	1979777	8553170	24	3328,104,92,222,84,63,69,122,237,251,215,108,91,135,978,353,63,34,55,157,146,117,100,175,	0,12559,19939,50012,51623,62504,97402,98351,100104,102900,113943,121103,122883,128068,133149,153845,190028,190384,190586,208054,264841,383735,495267,535034,
#Partially deleted in new
chr2	1789138	1910952	chr2:1789138-1910952	0	-	1789138	1789138	8553170	14	2869,144,110,92,222,84,63,69,122,237,251,215,108,206,	0,3182,12551,19937,50010,51621,62502,97400,98349,100102,102898,113941,121101,121608,
#Partially deleted in new
chr2	1789138	2326554	chr2:1789138-2326554	1	-	1791866	1979777	789624	25	2869,144,104,92,222,84,63,69,122,237,251,215,108,91,135,972,353,63,34,55,157,146,117,100,519,	0,3182,12557,19937,50010,51621,62502,97400,98349,100102,102898,113941,121101,122881,128066,133153,153843,190026,190382,190584,208052,264839,383733,495265,536897,
#Partially deleted in new
chr2	1789138	1917337	chr2:1789138-1917337	0	-	1791866	1917337	8553170	14	2869,144,104,92,222,84,63,122,237,251,215,108,91,133,	0,3182,12557,19937,50010,51621,62502,98349,100102,102898,113941,121101,122881,128066,
#Partially deleted in new
chr2	1789146	2326378	chr2:1789146-2326378	1	-	1791235	1979777	8553170	24	2116,144,104,92,222,84,63,69,122,237,251,215,108,91,135,978,353,34,55,157,146,117,100,343,	0,3174,12549,19929,50002,51613,62494,97392,98341,100094,102890,113933,121093,122873,128058,133139,153835,190374,190576,208044,264831,383725,495257,536889,
#Partially deleted in new
chr2	1789146	2326194	chr2:1789146-2326194	1	-	1792308	1979777	8553170	24	3318,110,92,222,84,63,69,122,237,251,215,108,91,135,972,353,63,34,55,157,146,117,100,159,	0,12543,19929,50002,51613,62494,97392,98341,100094,102890,113933,121093,122873,128058,133145,153835,190018,190374,190576,208044,264831,383725,495257,536889,
#Partially deleted in new
chr2	1789146	1910551	chr2:1789146-1910551	0	-	1789146	1789146	8553170	14	2861,144,104,92,222,84,63,69,122,237,251,215,108,81,	0,3174,12549,19929,50002,51613,62494,97392,98341,100094,102890,113933,121093,121324,
#Partially deleted in new
chr2	1789147	1979220	chr2:1789147-1979220	0	-	1791866	1979220	8553170	13	2860,144,104,92,222,84,63,69,122,237,251,353,56,	0,3173,12548,19928,50001,51612,62493,97391,98340,100093,102889,153834,190017,
#Partially deleted in new
chr2	1789150	2324642	chr2:1789150-2324642	1	-	1791866	1979777	789624	25	2857,144,110,92,222,84,63,69,122,237,251,215,108,91,135,972,353,63,34,55,157,146,117,100,311,	0,3170,12539,19925,49998,51609,62490,97388,98337,100090,102886,113929,121089,122869,128054,133141,153831,190014,190370,190572,208040,264827,383721,495253,535181,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	1789155	1835275	chr2:1789155-1835275	0	-	1789155	1789155	8553170	5	2852,144,104,92,228,	0,3165,12540,19920,45892,
#Partially deleted in new
chr2	1789158	1892409	chr2:1789158-1892409	0	-	1789158	1789158	8553170	11	2849,144,104,92,222,84,63,69,122,237,373,	0,3162,12537,19917,49990,51601,62482,97380,98329,100082,102878,
#Partially deleted in new
chr2	1789159	1910554	chr2:1789159-1910554	0	-	1789159	1789159	8553170	13	2103,144,104,92,222,84,63,69,122,237,251,215,315,	0,3161,12536,19916,49989,51600,62481,97379,98328,100081,102877,113920,121080,
#Partially deleted in new
chr2	1789168	1889424	chr2:1789168-1889424	0	-	1791235	1889424	8553170	11	2094,135,144,104,92,222,84,63,69,122,184,	0,2704,3152,12527,19907,49980,51591,62472,97370,98319,100072,
#Partially deleted in new
chr2	1789168	2331257	chr2:1789168-2331257	1	-	1791866	1979777	8553170	25	2839,144,104,92,222,84,63,69,122,237,251,215,108,91,135,975,353,63,34,55,157,146,117,100,291,	0,3152,12527,19907,49980,51591,62472,97370,98319,100072,102868,113911,121071,122851,128036,133117,153813,189996,190352,190554,208022,264809,383703,495235,541798,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	1789179	1792783	chr2:1789179-1792783	0	-	1789179	1789179	8553170	2	2083,463,	0,3141,
#Partially deleted in new
chr2	1789240	1861677	chr2:1789240-1861677	0	-	1789240	1789240	8553170	8	2767,144,104,92,222,84,63,1516,	0,3080,12455,19835,49908,51519,62400,70921,
#Partially deleted in new
chr2	1789253	2331344	chr2:1789253-2331344	1	-	1791866	1979777	8553170	24	2754,144,104,92,222,84,63,69,122,237,251,215,108,91,135,353,63,34,55,157,146,117,100,378,	0,3067,12442,19822,49895,51506,62387,97285,98234,99987,102783,113826,120986,122766,127951,153728,189911,190267,190469,207937,264724,383618,495150,541713,
#Partially deleted in new
chr2	1789256	1922983	chr2:1789256-1922983	0	-	1791235	1922983	8553170	16	2006,144,110,92,222,84,63,69,122,237,251,215,108,91,135,698,	0,3064,12433,19819,49892,51503,62384,97282,98231,99984,102780,113823,120983,122763,127948,133029,
#Partially deleted in new
chr2	1789285	1922569	chr2:1789285-1922569	0	-	1892209	1922569	8553170	16	1977,144,104,92,222,84,63,69,122,237,251,175,108,91,135,278,	0,3035,12410,19790,49863,51474,62355,97253,98202,99955,102751,113834,120954,122734,127919,133006,
#Partially deleted in new
chr2	1789313	1922569	chr2:1789313-1922569	0	-	1792308	1922569	8553170	15	3151,104,92,222,84,63,69,122,237,251,215,108,91,135,278,	0,12382,19762,49835,51446,62327,97225,98174,99927,102723,113766,120926,122706,127891,132978,
#Partially deleted in new
chr2	1789313	2324712	chr2:1789313-2324712	1	-	1791866	1979777	8553170	25	2694,144,104,92,222,84,63,69,122,237,251,215,108,91,135,972,353,63,34,55,157,146,117,100,381,	0,3007,12382,19762,49835,51446,62327,97225,98174,99927,102723,113766,120926,122706,127891,132978,153668,189851,190207,190409,207877,264664,383558,495090,535018,
#Partially deleted in new
chr2	1789318	2324345	chr2:1789318-2324345	1	-	1791866	1979777	8553170	25	2689,144,104,92,222,84,63,69,122,237,251,215,108,91,135,978,353,63,34,55,157,146,117,100,175,	0,3002,12377,19757,49830,51441,62322,97220,98169,99922,102718,113761,120921,122701,127886,132967,153663,189846,190202,190404,207872,264659,383553,495085,534852,
#Partially deleted in new
chr2	1789338	2331236	chr2:1789338-2331236	1	-	1792308	1979777	8553170	24	3126,104,92,222,84,63,69,122,237,251,215,108,91,135,978,353,63,34,55,157,146,117,100,270,	0,12357,19737,49810,51421,62302,97200,98149,99902,102698,113741,120901,122681,127866,132947,153643,189826,190182,190384,207852,264639,383533,495065,541628,
#Partially deleted in new
chr2	1789363	2331257	chr2:1789363-2331257	1	-	1791866	1979777	789624	26	2644,144,104,92,222,84,63,69,122,237,251,215,108,91,135,978,353,63,34,55,157,146,117,100,76,291,	0,2957,12332,19712,49785,51396,62277,97175,98124,99877,102673,113716,120876,122656,127841,132922,153618,189801,190157,190359,207827,264614,383508,495040,536672,541603,
#Partially deleted in new
chr2	1789363	1810119	chr2:1789363-1810119	0	-	1789363	1789363	8553170	4	2644,144,110,1044,	0,2957,12326,19712,
#Partially deleted in new
chr2	1789463	2331257	chr2:1789463-2331257	1	-	1791866	1979777	8553170	26	2544,144,104,92,222,84,63,69,122,237,251,215,108,91,135,972,353,63,34,55,157,143,146,117,100,291,	0,2857,12232,19612,49685,51296,62177,97075,98024,99777,102573,113616,120776,122556,127741,132828,153518,189701,190057,190259,207727,212909,264514,383408,494940,541503,
#Partially deleted in new
chr2	1790277	2331257	chr2:1790277-2331257	1	-	1791235	1979777	8553170	25	985,144,110,92,222,84,63,69,122,237,251,215,108,91,135,972,353,63,34,55,157,146,117,100,291,	0,2043,11412,18798,48871,50482,61363,96261,97210,98963,101759,112802,119962,121742,126927,132014,152704,188887,189243,189445,206913,263700,382594,494126,540689,
#Partially deleted in new
chr2	1791925	1842911	chr2:1791925-1842911	0	-	1791925	1839216	789624	7	82,144,104,92,222,84,143,	0,395,9770,17150,47223,48834,50843,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	1795524	1811526	chr2:1795524-1811526	3	+	1795524	1795524	8553170	5	210,136,321,134,206,	0,4642,14255,15549,15796,
#Partially deleted in new
chr2	1795609	1801948	chr2:1795609-1801948	1	+	1795609	1795609	8553170	3	125,136,715,	0,4557,5624,
#Partially deleted in new
chr2	1801794	1889463	chr2:1801794-1889463	0	-	1860187	1889463	8553170	9	5,92,222,84,63,90,69,122,223,	0,7281,37354,38965,49846,58367,84744,85693,87446,
#Partially deleted in new
chr2	1809084	1922968	chr2:1809084-1922968	0	-	1809084	1922968	8553170	14	83,222,84,63,69,63,122,237,251,215,108,91,135,677,	0,30064,31675,42556,77454,77974,78403,80156,82952,93995,101155,102935,108120,113207,
#Partially deleted in new
chr2	1809146	1842835	chr2:1809146-1842835	0	-	1809146	1839216	8553170	4	21,222,84,193,	0,30002,31613,33496,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	1816180	1842907	chr2:1816180-1842907	1	-	1817009	1840860	789624	3	836,222,2148,	0,22968,24579,
#Deleted in new
chr2	1824411	1828667	chr2:1824411-1828667	3	+	1824411	1824411	8553170	2	1686,1717,	0,2539,
#Partially deleted in new
chr2	1829936	1842888	chr2:1829936-1842888	1	-	1830778	1839216	8553170	4	984,222,84,246,	0,9212,10823,12706,
#Partially deleted in new
chr2	1837400	1842904	chr2:1837400-1842904	1	-	1837599	1839216	8553170	4	440,222,84,136,	0,1748,3359,5368,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	1838070	1923263	chr2:1838070-1923263	0	-	1839144	1923263	8553170	12	1300,84,63,69,122,237,251,215,108,91,135,978,	0,2689,13570,48468,49417,51170,53966,65009,72169,73949,79134,84215,
#Partially deleted in new
chr2	1878727	1892252	chr2:1878727-1892252	0	-	1879558	1892252	8553170	5	862,69,122,237,216,	0,7811,8760,10513,13309,
#Partially deleted in new
chr2	1883876	1922517	chr2:1883876-1922517	0	-	1885430	1922517	8553170	10	1618,69,122,237,251,215,108,91,135,226,	0,2662,3611,5364,8160,19203,26363,28143,33328,38415,
#Partially deleted in new
chr2	1883876	1922730	chr2:1883876-1922730	0	-	1892209	1922730	789624	10	215,69,122,237,251,175,108,91,135,445,	0,2662,3611,5364,8160,19243,26363,28143,33328,38409,
#Partially deleted in new
chr2	1883918	2326161	chr2:1883918-2326161	1	-	1885430	1979777	8553170	15	1576,69,122,237,251,972,353,63,34,55,157,146,117,100,126,	0,2620,3569,5322,8118,38373,59063,95246,95602,95804,113272,170059,288953,400485,442117,
#Partially deleted in new
chr2	1883935	2331248	chr2:1883935-2331248	0	-	1923205	1979777	8553170	18	156,69,122,237,251,215,108,91,135,978,63,34,55,157,146,117,100,282,	0,2603,3552,5305,8101,19144,26304,28084,33269,38350,95229,95585,95787,113255,170042,288936,400468,447031,
#Partially deleted in new
chr2	1886185	1903127	chr2:1886185-1903127	0	-	1886534	1903127	8553170	5	422,122,237,251,48,	0,1302,3055,5851,16894,
#Partially deleted in new
chr2	1902722	1912075	chr2:1902722-1912075	0	-	1902722	1902722	8553170	3	572,108,56,	0,7517,9297,
#Partially deleted in new
chr2	1903199	2324986	chr2:1903199-2324986	0	-	1903199	1979777	8553170	14	95,108,91,135,978,353,63,34,55,157,146,117,100,218,	0,7040,8820,14005,19086,39782,75965,76321,76523,93991,150778,269672,381204,421569,
#Partially deleted in new
chr2	1912091	2324938	chr2:1912091-2324938	0	-	1912091	1979777	8553170	11	19,135,353,63,34,55,157,146,117,100,170,	0,5113,30890,67073,67429,67631,85099,141886,260780,372312,412677,
#Partially deleted in new
chr2	1922537	2331257	chr2:1922537-2331257	0	-	1922537	1979777	8553170	9	726,353,63,34,55,157,146,117,291,	0,20444,56627,56983,57185,74653,131440,250334,408429,
#Partially deleted in new
chr2	1941155	2331257	chr2:1941155-2331257	0	-	1941155	1941155	8553170	9	2179,63,34,55,157,146,117,100,291,	0,38009,38365,38567,56035,112822,231716,343248,389811,
#Partially deleted in new
chr2	1972367	1979777	chr2:1972367-1979777	1	-	1972675	1979777	8553170	4	327,63,34,55,	0,6797,7153,7355,
#Partially deleted in new
chr2	1973303	1979550	chr2:1973303-1979550	0	-	1974741	1979550	8553170	3	1448,63,30,	0,5861,6217,
#Partially deleted in new
chr2	1979685	2172949	chr2:1979685-2172949	0	-	1979685	1979685	8553170	4	92,157,146,78,	0,17505,74292,193186,
#Partially deleted in new
chr2	1997112	2331260	chr2:1997112-2331260	0	-	1997112	1997112	8553170	5	235,146,117,100,294,	0,56865,175759,287291,333854,
#Partially deleted in new
chr2	1997113	2326371	chr2:1997113-2326371	0	-	1997113	1997113	8553170	5	234,146,117,100,336,	0,56864,175758,287290,328922,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	2049081	2324234	chr2:2049081-2324234	0	-	2049081	2049081	8553170	5	2345,146,117,100,64,	0,4896,123790,235322,275089,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	2049262	2324781	chr2:2049262-2324781	0	-	2049262	2049262	8553170	5	2164,146,117,100,450,	0,4715,123609,235141,275069,
#Partially deleted in new
chr2	2054037	2185649	chr2:2054037-2185649	0	-	2054037	2054037	8553170	3	86,117,237,	0,118834,131375,
#Partially deleted in new
chr2	2171667	2331251	chr2:2171667-2331251	0	-	2171667	2171667	8553170	3	1321,100,285,	0,112736,159299,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	2210632	2326138	chr2:2210632-2326138	0	-	2210632	2210632	8553170	3	1145,100,103,	0,73771,115403,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	2281930	2324985	chr2:2281930-2324985	0	-	2281930	2281930	8553170	2	2573,217,	0,42838,
#Partially deleted in new
chr2	2301859	2324985	chr2:2301859-2324985	0	-	2301859	2301859	8553170	2	2157,815,	0,22311,
#Partially deleted in new
chr2	2302964	2331664	chr2:2302964-2331664	0	-	2302964	2302964	8553170	3	1052,274,698,	0,23071,28002,
#Partially deleted in new
chr2	2303482	2331260	chr2:2303482-2331260	0	-	2303482	2303482	8553170	3	534,217,294,	0,2456,27484,
#Partially deleted in new
chr2	2303493	2331189	chr2:2303493-2331189	0	-	2303493	2303493	8553170	2	523,223,	0,27473,
#Partially deleted in new
chr2	2303574	2331258	chr2:2303574-2331258	0	-	2303574	2303574	8553170	2	442,65,	0,27619,
#Deleted in new
chr2	2319231	2327110	chr2:2319231-2327110	0	+	2319231	2319231	789624	2	152,3014,	0,4865,
#Deleted in new
chr2	2319243	2327108	chr2:2319243-2327108	3	+	2319243	2319243	8553170	2	140,3090,	0,4775,
#Partially deleted in new
chr2	2641988	2656630	chr2:2641988-2656630	3	-	2641988	2641988	8553170	2	412,135,	0,14507,
#Deleted in new
chr2	2729907	2730957	chr2:2729907-2730957	3	-	2729907	2729907	8553170	2	186,182,	0,868,
#Partially deleted in new
chr2	2834263	2838391	chr2:2834263-2838391	3	-	2834263	2834263	8553170	3	243,88,243,	0,2655,3885,
#Deleted in new
chr2	2870557	2871231	chr2:2870557-2871231	3	-	2870557	2870557	8553170	2	442,136,	0,538,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	2895047	3126026	chr2:2895047-3126026	3	-	2895047	2895047	789624	7	1633,117,58,98,144,94,200,	0,2140,70766,71530,230247,230514,230779,
#Partially deleted in new
chr2	3131580	3133105	chr2:3131580-3133105	1	-	3131580	3131580	8553170	2	586,132,	0,1393,
#Partially deleted in new
chr2	3131984	3145780	chr2:3131984-3145780	3	-	3131984	3131984	8553170	2	182,234,	0,13562,
#Partially deleted in new
chr2	3156755	3157797	chr2:3156755-3157797	3	+	3156755	3156755	8553170	3	93,137,205,	0,369,837,
#Partially deleted in new
chr2	3188924	3377882	chr2:3188924-3377882	3	-	3189333	3377689	789624	9	584,168,168,137,100,157,133,84,235,	0,3489,5074,7956,25224,68374,149092,165625,188723,
#Partially deleted in new
chr2	3188924	3377830	chr2:3188924-3377830	1	-	3189333	3377689	789624	10	584,168,168,137,100,157,81,133,84,183,	0,3489,5074,7956,25224,68374,85414,149092,165625,188723,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	3188924	3320544	chr2:3188924-3320544	0	-	3188924	3188924	8553170	11	584,168,168,137,100,157,113,221,102,248,934,	0,3489,5074,7956,25224,68374,72790,72992,129932,130296,130686,
#Partially deleted in new
chr2	3189324	3194391	chr2:3189324-3194391	0	-	3189324	3189324	8553170	3	184,168,393,	0,3089,4674,
#Partially deleted in new
chr2	3189459	3377788	chr2:3189459-3377788	0	-	3214197	3377689	789624	7	49,168,168,137,100,84,141,	0,2954,4539,7421,24689,165090,188188,
#Partially deleted in new
chr2	3192413	3377800	chr2:3192413-3377800	0	-	3192413	3377689	789624	5	168,168,137,21,153,	0,1585,4467,21735,185234,
#Partially deleted in new
chr2	3194011	3377470	chr2:3194011-3377470	0	-	3194011	3194011	8553170	6	155,137,100,133,84,148,	0,2869,20137,144005,160538,183311,
#Partially deleted in new
chr2	3194082	3377781	chr2:3194082-3377781	0	-	3196977	3377689	789624	6	84,137,100,133,84,134,	0,2798,20066,143934,160467,183565,
#Partially deleted in new
chr2	3194082	3257559	chr2:3194082-3257559	0	-	3194082	3194082	8553170	4	84,137,100,261,	0,2798,20066,63216,
#Partially deleted in new
chr2	3196910	3214452	chr2:3196910-3214452	0	-	3196910	3196910	8553170	2	107,304,	0,17238,
#Partially deleted in new
chr2	3207803	3377790	chr2:3207803-3377790	1	-	3208528	3377689	789624	6	1154,100,157,133,84,143,	0,6345,49495,130213,146746,169844,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	3214148	3377793	chr2:3214148-3377793	0	-	3338129	3377689	789624	6	100,157,133,118,84,146,	0,43150,123868,139057,140401,163499,
#Partially deleted in new
chr2	3214185	3282826	chr2:3214185-3282826	0	-	3214185	3214185	8553170	3	63,157,357,	0,43113,68284,
#Partially deleted in new
chr2	3257350	3377817	chr2:3257350-3377817	0	-	3257350	3377689	789624	5	105,102,133,84,170,	0,61506,80666,97199,120297,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	3298340	3301465	chr2:3298340-3301465	3	-	3298340	3298340	8553170	2	106,612,	0,2513,
#Partially deleted in new
chr2	3379674	3479567	chr2:3379674-3479567	3	+	3387623	3479461	789624	12	165,1051,117,114,139,113,73,74,99,101,88,349,	0,7945,22102,42206,44850,64104,77946,80588,85922,98020,99171,99544,
#Partially deleted in new
chr2	3379685	3479566	chr2:3379685-3479566	1	+	3387623	3479461	789624	12	191,1051,117,114,139,113,73,74,99,101,88,348,	0,7934,22091,42195,44839,64093,77935,80577,85911,98009,99160,99533,
#Partially deleted in new
chr2	3379719	3389000	chr2:3379719-3389000	0	+	3379719	3379719	8553170	2	157,1381,	0,7900,
#Partially deleted in new
chr2	3388126	3421970	chr2:3388126-3421970	0	+	3388126	3421705	789624	4	544,117,87,90,	0,13650,33573,33754,
#Partially deleted in new
chr2	3421882	3479567	chr2:3421882-3479567	0	+	3421882	3478872	789624	8	112,139,113,73,74,99,88,349,	0,2642,21896,35738,38380,43714,56963,57336,
#Partially deleted in new
chr2	3424597	3468006	chr2:3424597-3468006	0	+	3424597	3424597	8553170	6	66,113,73,74,99,577,	0,19181,33023,35665,40999,42832,
#Partially deleted in new
chr2	3424618	3458181	chr2:3424618-3458181	0	+	3424618	3457182	789624	5	45,113,80,73,387,	0,19160,32531,33002,33176,
#Partially deleted in new
chr2	3443725	3478871	chr2:3443725-3478871	0	+	3443725	3443725	8553170	6	166,73,74,99,140,26,	0,13895,16537,21871,22528,35120,
#Partially deleted in new
chr2	3443791	3460942	chr2:3443791-3460942	0	+	3443791	3443791	8553170	4	100,73,74,296,	0,13829,16471,16855,
#Partially deleted in new
chr2	3443795	3465807	chr2:3443795-3465807	0	+	3443795	3443795	8553170	4	96,73,74,211,	0,13825,16467,21801,
#Partially deleted in new
chr2	3443867	3479571	chr2:3443867-3479571	0	+	3443867	3479461	789624	7	24,73,74,99,104,88,353,	0,13753,16395,21729,33824,34978,35351,
#Partially deleted in new
chr2	3449195	3460327	chr2:3449195-3460327	0	+	3449195	3449195	8553170	3	282,73,65,	0,8425,11067,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	3454611	3479566	chr2:3454611-3479566	0	+	3454611	3454611	8553170	7	2618,73,74,99,101,88,348,	0,3009,5651,10985,23083,24234,24607,
#Partially deleted in new
chr2	3458312	3478913	chr2:3458312-3478913	0	+	3458312	3458312	8553170	5	149,74,99,101,68,	0,1950,7284,19382,20533,
#Partially deleted in new
chr2	3459930	3478916	chr2:3459930-3478916	0	+	3459930	3459930	8553170	4	406,99,101,71,	0,5666,17764,18915,
#Partially deleted in new
chr2	3460281	3478101	chr2:3460281-3478101	0	+	3460281	3460281	8553170	3	55,99,407,	0,5315,17413,
#Partially deleted in new
chr2	3460300	3478913	chr2:3460300-3478913	0	+	3460300	3462989	789624	5	36,214,99,101,68,	0,2557,5296,17394,18545,
#Partially deleted in new
chr2	3465672	3479567	chr2:3465672-3479567	0	+	3465672	3479461	789624	3	36,88,349,	0,13173,13546,
#Partially deleted in new
chr2	3472420	3479567	chr2:3472420-3479567	0	+	3472420	3472420	8553170	4	182,101,88,349,	0,5274,6425,6798,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	3477714	3485094	chr2:3477714-3485094	0	+	3477714	3484878	789624	3	81,88,375,	0,1131,7005,
#Deleted in new
chr2	3478713	3479565	chr2:3478713-3479565	0	+	3478713	3478713	8553170	2	220,347,	0,505,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	3481241	3482409	chr2:3481241-3482409	3	-	3481241	3481241	8553170	2	644,264,	0,904,
#Deleted in new
chr2	3496955	3497428	chr2:3496955-3497428	3	+	3496955	3496955	8553170	1	473,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	3497360	3519736	chr2:3497360-3519736	3	-	3498962	3519487	0	4	1722,180,120,369,	0,3453,16496,22007,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	3498452	3517747	chr2:3498452-3517747	1	-	3498962	3514909	0	4	630,180,120,2940,	0,2361,15404,16355,
#Partially deleted in new
chr2	3498660	3500816	chr2:3498660-3500816	0	-	3498962	3500816	789624	2	422,232,	0,1924,
#Partially deleted in new
chr2	3519274	3523197	chr2:3519274-3523197	3	+	3519274	3519274	8553170	2	682,292,	0,3631,
#Duplicated in new
chr2	3531812	3536873	chr2:3531812-3536873	0	-	3531812	3531812	8553170	3	498,143,150,	0,2300,4911,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	3531983	3547957	chr2:3531983-3547957	3	-	3532299	3547957	789624	3	327,67,27,	0,13821,15947,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	3531983	3533782	chr2:3531983-3533782	1	-	3531983	3531983	8553170	3	327,83,72,	0,1124,1727,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	3531988	3534143	chr2:3531988-3534143	0	-	3531988	3531988	8553170	3	322,83,31,	0,1119,2124,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	3531989	3533370	chr2:3531989-3533370	0	-	3531989	3531989	8553170	2	321,263,	0,1118,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	3533223	3536869	chr2:3533223-3536869	3	-	3533223	3533223	8553170	3	625,143,146,	0,889,3500,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	3544792	3558289	chr2:3544792-3558289	0	-	3558128	3558260	789624	8	1079,125,85,55,100,165,116,395,	0,3138,3847,4265,5580,7351,11996,13102,
#Partially deleted in new
chr2	3545114	3558616	chr2:3545114-3558616	3	-	3545784	3558260	0	8	757,125,85,55,100,165,116,484,	0,2816,3525,3943,5258,7029,11674,13018,
#Deleted in new
chr2	3550123	3552308	chr2:3550123-3552308	0	-	3550123	3550123	8553170	2	349,165,	0,2020,
#Partially deleted in new
chr2	3550373	3558332	chr2:3550373-3558332	0	-	3557839	3558260	789624	5	99,165,116,169,200,	0,1770,6415,7301,7759,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	3558491	3561745	chr2:3558491-3561745	3	+	3558491	3558491	789624	3	507,282,429,	0,956,2825,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	3558577	3561731	chr2:3558577-3561731	0	+	3558577	3558577	789624	2	421,415,	0,2739,
#Partially deleted in new
chr2	3575204	3580920	chr2:3575204-3580920	3	+	3575609	3580882	0	7	146,93,72,144,65,151,116,	0,387,612,1282,2505,4905,5600,
#Partially deleted in new
chr2	3575259	3580920	chr2:3575259-3580920	1	+	3575609	3580882	0	7	91,93,72,144,65,151,116,	0,332,557,1227,2450,4850,5545,
#Partially deleted in new
chr2	3575315	3580919	chr2:3575315-3580919	1	+	3575609	3580882	0	7	35,128,72,144,65,151,115,	0,241,501,1171,2394,4794,5489,
#Partially deleted in new
chr2	3575320	3580878	chr2:3575320-3580878	0	+	3575609	3580878	789624	7	30,93,72,72,65,151,74,	0,271,496,1238,2389,4789,5484,
#Partially deleted in new
chr2	3575322	3577926	chr2:3575322-3577926	0	+	3575322	3575322	8553170	5	28,93,72,144,217,	0,269,494,1164,2387,
#Partially deleted in new
chr2	3575324	3580919	chr2:3575324-3580919	1	+	3575609	3580882	0	7	124,93,72,144,65,151,115,	0,267,492,1162,2385,4785,5480,
#Partially deleted in new
chr2	3575324	3580919	chr2:3575324-3580919	1	+	3575609	3580882	0	6	360,72,144,65,151,115,	0,492,1162,2385,4785,5480,
#Partially deleted in new
chr2	3575344	3580475	chr2:3575344-3580475	1	+	3575609	3580317	789624	5	340,72,144,65,366,	0,472,1142,2365,4765,
#Partially deleted in new
chr2	3575357	3580901	chr2:3575357-3580901	1	+	3575609	3580882	0	7	91,84,72,144,65,151,97,	0,243,459,1129,2352,4752,5447,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	3575357	3580918	chr2:3575357-3580918	0	+	3575357	3575357	8553170	2	327,5102,	0,459,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	3575632	3576873	chr2:3575632-3576873	0	+	3575632	3575632	8553170	3	52,72,387,	0,184,854,
#Partially deleted in new
chr2	3575845	3580919	chr2:3575845-3580919	0	+	3575845	3575845	8553170	5	43,21,65,151,115,	0,764,1864,4264,4959,
#Deleted in new
chr2	3579818	3580918	chr2:3579818-3580918	0	+	3579818	3579818	8553170	2	442,114,	0,986,
#Partially deleted in new
chr2	3594831	3644644	chr2:3594831-3644644	1	+	3604340	3644118	0	6	337,156,72,54,96,918,	0,9483,18479,45446,48612,48895,
#Partially deleted in new
chr2	3594835	3605040	chr2:3594835-3605040	0	+	3594835	3594835	8553170	3	333,156,31,	0,9479,10174,
#Partially deleted in new
chr2	3594954	3644446	chr2:3594954-3644446	0	+	3594954	3594954	8553170	5	214,156,54,96,720,	0,9360,45323,48489,48772,
#Partially deleted in new
chr2	3594954	3644446	chr2:3594954-3644446	0	+	3594954	3594954	8553170	6	214,156,72,54,96,720,	0,9360,42578,45323,48489,48772,
#Partially deleted in new
chr2	3595048	3644458	chr2:3595048-3644458	1	+	3604428	3644118	0	8	120,156,72,79,72,54,96,732,	0,9266,18262,30965,42484,45229,48395,48678,
#Partially deleted in new
chr2	3595091	3644458	chr2:3595091-3644458	3	+	3604340	3644118	0	7	77,156,72,72,54,96,732,	0,9223,18219,42441,45186,48352,48635,
#Partially deleted in new
chr2	3595153	3644446	chr2:3595153-3644446	0	+	3604340	3641262	789624	8	15,156,72,72,54,193,96,720,	0,9161,18157,42379,45124,46086,48290,48573,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	3601905	3644644	chr2:3601905-3644644	1	+	3603645	3644118	0	8	118,109,156,72,72,54,96,918,	0,1647,2409,11405,35627,38372,41538,41821,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	3601905	3640331	chr2:3601905-3640331	0	+	3603645	3640331	789624	6	118,109,156,72,72,54,	0,1647,2409,11405,35627,38372,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	3603396	3604242	chr2:3603396-3604242	3	-	3603396	3603396	8553170	2	242,451,	0,395,
#Partially deleted in new
chr2	3605700	3644446	chr2:3605700-3644446	1	+	3606191	3644118	0	6	543,72,72,54,96,720,	0,7610,31832,34577,37743,38026,
#Partially deleted in new
chr2	3606051	3644446	chr2:3606051-3644446	1	+	3606191	3644118	0	5	192,72,54,96,720,	0,31481,34226,37392,37675,
#Partially deleted in new
chr2	3606051	3644446	chr2:3606051-3644446	1	+	3606191	3644118	0	5	192,72,54,96,720,	0,7259,34226,37392,37675,
#Partially deleted in new
chr2	3606051	3644446	chr2:3606051-3644446	1	+	3606191	3644118	0	4	192,54,96,720,	0,34226,37392,37675,
#Deleted in new
chr2	3617547	3617757	chr2:3617547-3617757	7	-	3617547	3617547	16724991	1	210,	0,
#Partially deleted in new
chr2	3658194	3702671	chr2:3658194-3702671	3	+	3671157	3702563	789624	12	100,95,51,88,126,80,133,156,74,109,125,309,	0,12901,15880,20273,21674,23439,24747,37522,38080,39153,43317,44168,
#Deleted in new
chr2	3688020	3688981	chr2:3688020-3688981	7	-	3688020	3688020	16724991	1	961,	0,
#Partially deleted in new
chr2	3694620	3702671	chr2:3694620-3702671	0	+	3694620	3694620	8553170	5	1252,74,109,125,309,	0,1654,2727,6891,7742,
#Partially deleted in new
chr2	3695090	3702448	chr2:3695090-3702448	0	+	3695090	3695090	8553170	6	175,156,74,109,125,86,	0,626,1184,2257,6421,7272,
#Deleted in new
chr2	3702584	3704153	chr2:3702584-3704153	3	-	3702584	3702584	8553170	2	530,277,	0,1292,
#Partially deleted in new
chr2	3703591	3847404	chr2:3703591-3847404	3	+	3703751	3847183	789624	11	447,52,77,129,138,43,127,101,69,42,251,	0,4957,23411,38328,49171,51000,64162,65719,75224,81467,143562,
#Partially deleted in new
chr2	3725945	3788532	chr2:3725945-3788532	0	+	3725945	3725945	8553170	8	82,77,127,93,101,69,42,125,	0,1057,41808,43103,43365,52870,59113,62462,
#Partially deleted in new
chr2	3844183	3847411	chr2:3844183-3847411	0	+	3844183	3844183	8553170	2	459,258,	0,2970,
#Partially deleted in new
chr2	3957654	3974070	chr2:3957654-3974070	1	-	3957654	3957654	789624	3	1287,641,526,	0,2261,15890,
#Deleted in new
chr2	3958099	3960297	chr2:3958099-3960297	0	-	3958099	3958099	8553170	2	842,734,	0,1464,
#Deleted in new
chr2	3958335	3960292	chr2:3958335-3960292	2	-	3958335	3958335	8553170	3	606,144,729,	0,916,1228,
#Deleted in new
chr2	3958563	3960297	chr2:3958563-3960297	0	-	3958563	3958563	8553170	3	378,211,382,	0,1000,1352,
#Deleted in new
chr2	3958722	3960297	chr2:3958722-3960297	0	-	3958722	3958722	8553170	3	219,73,382,	0,841,1193,
#Deleted in new
chr2	3959266	3960297	chr2:3959266-3960297	0	-	3959266	3959266	8553170	3	129,211,382,	0,297,649,
#Partially deleted in new
chr2	3959650	3974019	chr2:3959650-3974019	1	-	3959650	3959650	8553170	5	124,641,125,110,475,	0,265,2119,8528,13894,
#Partially deleted in new
chr2	3960093	3974036	chr2:3960093-3974036	0	-	3960093	3960093	8553170	3	463,125,492,	0,1676,13451,
#Partially deleted in new
chr2	3960261	3974027	chr2:3960261-3974027	1	-	3960261	3960261	8553170	3	295,34,483,	0,1508,13283,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	3972844	3973695	chr2:3972844-3973695	0	-	3972844	3972844	8553170	2	230,151,	0,700,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	3972845	3973678	chr2:3972845-3973678	0	-	3972845	3972845	8553170	2	257,134,	0,699,
#Partially deleted in new
chr2	4136643	4140731	chr2:4136643-4140731	3	-	4136643	4136643	8553170	3	361,142,104,	0,477,3984,
#Deleted in new
chr2	4514203	4515056	chr2:4514203-4515056	7	-	4514203	4514203	16724991	1	853,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	4628221	4656215	chr2:4628221-4656215	3	-	4628221	4628221	789624	5	2169,166,217,61,50,	0,6672,23091,24291,27944,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	4630199	4656203	chr2:4630199-4656203	0	-	4630199	4630199	8553170	4	191,217,61,38,	0,21113,22313,25966,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	4630199	4643355	chr2:4630199-4643355	0	-	4630199	4630199	8553170	2	191,436,	0,12720,
#Deleted in new
chr2	4827000	4827084	chr2:4827000-4827084	3	-	4827000	4827000	8553170	1	84,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	4945276	4945383	chr2:4945276-4945383	3	+	4945276	4945276	8553170	1	107,	0,
#Deleted in new
chr2	5313739	5314134	chr2:5313739-5314134	7	-	5313739	5313739	16724991	1	395,	0,
#Partially deleted in new
chr2	5549779	5556031	chr2:5549779-5556031	3	-	5549779	5549779	8553170	2	276,43,	0,6209,
#Partially deleted in new
chr2	5602504	5691488	chr2:5602504-5691488	3	-	5602504	5602504	8553170	2	166,302,	0,88682,
#Partially deleted in new
chr2	5618326	5691118	chr2:5618326-5691118	3	-	5618326	5618326	8553170	7	215,131,186,195,73,114,144,	0,2877,15804,17089,31512,66099,72648,
#Partially deleted in new
chr2	5677141	5691046	chr2:5677141-5691046	0	-	5677141	5677141	8553170	3	57,114,72,	0,7284,13833,
#Deleted in new
chr2	5692666	5701385	chr2:5692666-5701385	3	+	5692721	5694047	789624	1	8719,	0,
#Partially deleted in new
chr2	5696219	5708095	chr2:5696219-5708095	3	+	5696219	5696219	8553170	4	74,82,55,988,	0,5246,7347,10888,
#Partially deleted in new
chr2	5726448	5730342	chr2:5726448-5730342	3	+	5726448	5726448	8553170	2	131,1615,	0,2279,
#Deleted in new
chr2	5810640	5812596	chr2:5810640-5812596	3	-	5810640	5810640	789624	4	133,56,164,58,	0,576,980,1898,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	5932686	5980687	chr2:5932686-5980687	1	+	5932686	5932686	8553170	5	235,653,157,121,268,	0,35899,36643,40622,47733,
#Partially deleted in new
chr2	5932787	5984893	chr2:5932787-5984893	1	+	5932787	5932787	8553170	5	134,125,557,584,1929,	0,36326,47632,49486,50177,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	5970958	5974250	chr2:5970958-5974250	0	+	5970958	5970958	8553170	1	3292,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	5970972	5974241	chr2:5970972-5974241	0	+	5970972	5970972	8553170	1	3269,	0,
#Deleted in new
chr2	5974661	5974732	chr2:5974661-5974732	3	+	5974661	5974661	5263520	1	71,	0,
#Deleted in new
chr2	5981977	5984897	chr2:5981977-5984897	1	+	5981977	5981977	8553170	2	95,2600,	0,320,
#Deleted in new
chr2	5982443	5985718	chr2:5982443-5985718	1	+	5982443	5982443	8553170	2	414,294,	0,2981,
#Partially deleted in new
chr2	5982570	6001275	chr2:5982570-6001275	3	+	5982570	5982570	8553170	2	287,293,	0,18412,
#Partially deleted in new
chr2	6258347	6341782	chr2:6258347-6341782	3	-	6258347	6258347	8553170	8	612,360,79,165,206,184,133,51,	0,33065,43395,44012,44795,54618,56466,83384,
#Partially deleted in new
chr2	6312953	6325646	chr2:6312953-6325646	0	-	6312953	6312953	8553170	3	196,133,250,	0,1860,12443,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	6366009	6375422	chr2:6366009-6375422	3	-	6366009	6366009	789624	3	155,147,3907,	0,4836,5506,
#Deleted in new
chr2	6495876	6496798	chr2:6495876-6496798	7	-	6495876	6495876	16724991	1	922,	0,
#Partially deleted in new
chr2	6496002	6503806	chr2:6496002-6503806	3	+	6496002	6496002	8553170	3	250,130,148,	0,6723,7656,
#Partially deleted in new
chr2	6615388	6650222	chr2:6615388-6650222	0	-	6615388	6615388	8553170	5	308,47,253,65,117,	0,2315,2674,20187,34717,
#Partially deleted in new
chr2	6615589	6633870	chr2:6615589-6633870	0	-	6615589	6615589	8553170	5	107,47,253,102,202,	0,2114,2473,10547,18079,
#Partially deleted in new
chr2	6615789	6633948	chr2:6615789-6633948	1	-	6615789	6615789	8553170	6	125,47,253,102,45,280,	0,1914,2273,10347,16908,17879,
#Partially deleted in new
chr2	6617201	6650247	chr2:6617201-6650247	0	-	6617201	6617201	8553170	2	549,142,	0,32904,
#Partially deleted in new
chr2	6617311	6650247	chr2:6617311-6650247	0	-	6617311	6617311	8553170	3	439,253,142,	0,751,32794,
#Partially deleted in new
chr2	6617407	6634784	chr2:6617407-6634784	0	-	6617407	6617407	8553170	6	343,253,102,45,301,190,	0,655,8729,15290,16261,17187,
#Partially deleted in new
chr2	6617472	6633874	chr2:6617472-6633874	0	-	6617472	6617472	8553170	4	278,253,102,206,	0,590,8664,16196,
#Partially deleted in new
chr2	6617655	6633822	chr2:6617655-6633822	0	-	6617655	6617655	8553170	5	95,253,146,45,154,	0,407,888,15042,16013,
#Partially deleted in new
chr2	6618062	6650247	chr2:6618062-6650247	0	-	6618062	6618062	8553170	4	253,102,186,142,	0,8074,29473,32043,
#Partially deleted in new
chr2	6618076	6635174	chr2:6618076-6635174	0	-	6618076	6618076	8553170	5	239,102,45,301,55,	0,8060,14621,15592,17043,
#Partially deleted in new
chr2	6618115	6638827	chr2:6618115-6638827	0	-	6618115	6618115	8553170	7	200,301,139,132,63,84,111,	0,15553,16479,17004,19975,20162,20601,
#Partially deleted in new
chr2	6618267	6639118	chr2:6618267-6639118	1	-	6618267	6618267	8553170	8	48,301,139,132,65,84,81,68,	0,15401,16327,16852,17308,20010,20449,20783,
#Partially deleted in new
chr2	6626108	6633787	chr2:6626108-6633787	0	-	6626108	6626108	789624	3	130,45,119,	0,6589,7560,
#Partially deleted in new
chr2	6626111	6634706	chr2:6626111-6634706	0	-	6626111	6626111	789624	3	127,301,112,	0,7557,8483,
#Partially deleted in new
chr2	6626121	6650247	chr2:6626121-6650247	0	-	6626121	6626121	8553170	9	117,45,71,132,65,63,84,81,142,	0,6576,8678,8998,9454,11969,12156,12595,23984,
#Partially deleted in new
chr2	6626122	6650247	chr2:6626122-6650247	0	-	6626122	6626122	8553170	8	116,132,65,63,84,81,164,142,	0,8997,9453,11968,12155,12594,12991,23983,
#Partially deleted in new
chr2	6626138	6635714	chr2:6626138-6635714	0	-	6626138	6626138	8553170	6	100,45,301,73,132,139,	0,6559,7530,8661,8981,9437,
#Deleted in new
chr2	6632260	6633969	chr2:6632260-6633969	0	-	6632260	6632260	8553170	2	482,357,	0,1352,
#Partially deleted in new
chr2	6632321	6635594	chr2:6632321-6635594	1	-	6632321	6632321	8553170	6	247,181,106,73,132,19,	0,1467,2121,2478,2798,3254,
#Partially deleted in new
chr2	6632440	6650247	chr2:6632440-6650247	2	-	6632440	6632440	8553170	8	302,301,132,65,63,84,151,142,	0,1228,2679,3135,5650,5837,6276,17665,
#Partially deleted in new
chr2	6632459	6636163	chr2:6632459-6636163	1	-	6632459	6632459	8553170	6	283,301,112,132,65,220,	0,1209,2340,2660,3116,3484,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	6632568	6635493	chr2:6632568-6635493	0	-	6632568	6632568	8553170	5	174,301,73,132,103,	0,1100,2231,2551,2822,
#Partially deleted in new
chr2	6632699	6636220	chr2:6632699-6636220	0	-	6632699	6632699	8553170	6	43,301,73,132,65,277,	0,969,2100,2420,2876,3244,
#Partially deleted in new
chr2	6633668	6635444	chr2:6633668-6635444	0	-	6633668	6633668	8553170	4	301,73,132,9,	0,1131,1451,1767,
#Partially deleted in new
chr2	6633788	6650247	chr2:6633788-6650247	0	-	6633788	6633788	8553170	6	181,132,65,84,151,142,	0,1331,1787,4489,4928,16317,
#Partially deleted in new
chr2	6633837	6638748	chr2:6633837-6638748	0	-	6633837	6633837	8553170	7	132,317,132,65,63,84,32,	0,757,1282,1738,4253,4440,4879,
#Partially deleted in new
chr2	6633868	6635823	chr2:6633868-6635823	0	-	6633868	6633868	8553170	4	101,278,132,248,	0,726,1251,1707,
#Partially deleted in new
chr2	6633916	6650247	chr2:6633916-6650247	0	-	6633916	6633916	8553170	8	53,132,65,63,84,186,117,142,	0,1203,1659,4174,4361,4800,15294,16189,
#Partially deleted in new
chr2	6633932	6635992	chr2:6633932-6635992	0	-	6633932	6633932	8553170	5	37,139,132,65,49,	0,662,1187,1643,2011,
#Partially deleted in new
chr2	6634642	6639279	chr2:6634642-6639279	0	-	6634642	6634642	8553170	7	91,132,65,63,84,151,229,	0,477,933,3448,3635,4074,4408,
#Partially deleted in new
chr2	6634648	6650247	chr2:6634648-6650247	0	-	6634648	6634648	8553170	7	85,132,65,63,84,151,142,	0,471,927,3442,3629,4068,15457,
#Partially deleted in new
chr2	6634816	6650247	chr2:6634816-6650247	0	-	6634816	6634816	8553170	7	95,65,84,151,223,186,142,	0,759,3461,3900,4234,12719,15289,
#Partially deleted in new
chr2	6635119	6650247	chr2:6635119-6650247	0	-	6635119	6635119	8553170	7	132,65,63,84,151,186,142,	0,456,2971,3158,3597,12416,14986,
#Partially deleted in new
chr2	6635119	6650247	chr2:6635119-6650247	0	-	6635119	6635119	8553170	8	132,65,63,84,151,223,53,142,	0,456,2971,3158,3597,3931,14091,14986,
#Partially deleted in new
chr2	6635119	6650222	chr2:6635119-6650222	0	-	6635119	6635119	8553170	7	132,65,63,84,81,186,117,	0,456,2971,3158,3597,12416,14986,
#Partially deleted in new
chr2	6635214	6650222	chr2:6635214-6650222	0	-	6635214	6635214	8553170	8	37,65,63,84,151,186,171,117,	0,361,2876,3063,3502,12321,13996,14891,
#Partially deleted in new
chr2	6635231	6650209	chr2:6635231-6650209	0	-	6635231	6635231	8553170	8	20,65,63,84,81,227,171,104,	0,344,2859,3046,3485,3819,13979,14874,
#Partially deleted in new
chr2	6635451	6647568	chr2:6635451-6647568	0	-	6635451	6635451	8553170	6	57,63,84,151,227,33,	0,2639,2826,3265,3599,12084,
#Partially deleted in new
chr2	6635575	6650124	chr2:6635575-6650124	0	-	6635575	6635575	8553170	6	65,63,84,151,223,19,	0,2515,2702,3141,3475,14530,
#Partially deleted in new
chr2	6635833	6649329	chr2:6635833-6649329	1	-	6635833	6635833	8553170	6	411,63,84,151,227,119,	0,2257,2444,2883,3217,13377,
#Deleted in new
chr2	6636060	6638805	chr2:6636060-6638805	1	-	6636060	6636060	8553170	5	666,41,63,84,89,	0,747,2030,2217,2656,
#Deleted in new
chr2	6636398	6638291	chr2:6636398-6638291	0	-	6636398	6636398	8553170	3	328,354,14,	0,1401,1879,
#Partially deleted in new
chr2	6636576	6650501	chr2:6636576-6650501	1	-	6636576	6636576	8553170	6	150,63,84,151,223,396,	0,1514,1701,2140,2474,13529,
#Partially deleted in new
chr2	6636632	6650247	chr2:6636632-6650247	0	-	6636632	6636632	8553170	6	94,63,84,151,186,142,	0,1458,1645,2084,10903,13473,
#Deleted in new
chr2	6637683	6639125	chr2:6637683-6639125	0	-	6637683	6637683	8553170	4	470,84,151,75,	0,594,1033,1367,
#Partially deleted in new
chr2	6637779	6649238	chr2:6637779-6649238	0	-	6637779	6637779	8553170	5	374,84,81,223,28,	0,498,937,1271,11431,
#Partially deleted in new
chr2	6638137	6650247	chr2:6638137-6650247	0	-	6638137	6638137	8553170	5	16,84,151,311,142,	0,140,579,829,11968,
#Partially deleted in new
chr2	6638298	6650247	chr2:6638298-6650247	0	-	6638298	6638298	8553170	5	63,186,227,171,142,	0,418,752,10912,11807,
#Partially deleted in new
chr2	6638304	6650247	chr2:6638304-6650247	0	-	6638304	6638304	8553170	6	57,186,227,186,117,142,	0,412,746,9231,10906,11801,
#Partially deleted in new
chr2	6638315	6650247	chr2:6638315-6650247	0	-	6638315	6638315	8553170	5	46,151,227,186,142,	0,401,735,9220,11790,
#Partially deleted in new
chr2	6638750	6650247	chr2:6638750-6650247	0	-	6638750	6638750	8553170	5	117,227,186,171,142,	0,300,8785,10460,11355,
#Partially deleted in new
chr2	6638791	6650247	chr2:6638791-6650247	0	-	6638791	6638791	8553170	4	76,227,171,142,	0,259,10419,11314,
#Partially deleted in new
chr2	6639122	6650519	chr2:6639122-6650519	0	-	6639122	6639122	8553170	2	155,414,	0,10983,
#Partially deleted in new
chr2	6640262	6650247	chr2:6640262-6650247	0	-	6640262	6640262	8553170	3	406,186,142,	0,7273,9843,
#Partially deleted in new
chr2	6649090	6650247	chr2:6649090-6650247	0	-	6649090	6649090	8553170	2	237,142,	0,1015,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	6649103	6650247	chr2:6649103-6650247	0	-	6649103	6649103	8553170	3	160,154,142,	0,465,1002,
#Partially deleted in new
chr2	6649104	6650444	chr2:6649104-6650444	0	-	6649104	6649104	789624	2	277,339,	0,1001,
#Partially deleted in new
chr2	6649104	6650310	chr2:6649104-6650310	0	-	6649104	6649104	8553170	2	218,205,	0,1001,
#Partially deleted in new
chr2	6649105	6650243	chr2:6649105-6650243	0	-	6649105	6649105	8553170	2	220,138,	0,1000,
#Partially deleted in new
chr2	6649151	6650507	chr2:6649151-6650507	0	-	6649151	6649151	8553170	2	143,402,	0,954,
#Partially deleted in new
chr2	6649151	6650525	chr2:6649151-6650525	0	-	6649151	6649151	8553170	2	268,420,	0,954,
#Partially deleted in new
chr2	6649151	6650535	chr2:6649151-6650535	0	-	6649151	6649151	8553170	2	112,430,	0,954,
#Deleted in new
chr2	6650372	6650439	chr2:6650372-6650439	3	+	6650372	6650372	5263520	1	67,	0,
#Partially deleted in new
chr2	6728176	6731322	chr2:6728176-6731322	0	-	6728176	6728176	8553170	4	71,90,95,168,	0,1340,2472,2978,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	6729167	6770311	chr2:6729167-6770311	3	-	6729167	6729167	789624	6	495,95,1106,109,93,233,	0,1481,1987,3528,7455,40911,
#Partially deleted in new
chr2	6729167	6731226	chr2:6729167-6731226	0	-	6729167	6729167	8553170	3	439,95,68,	0,1481,1991,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	6828513	6833531	chr2:6828513-6833531	1	-	6828513	6828513	8553170	3	442,139,218,	0,1454,4800,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	6828879	6840464	chr2:6828879-6840464	3	-	6828879	6828879	789624	4	76,139,117,174,	0,1088,4434,11411,
#Partially deleted in new
chr2	6848315	6865696	chr2:6848315-6865696	3	-	6849849	6865696	789624	5	1658,234,202,115,675,	0,3134,12868,15148,16706,
#Partially deleted in new
chr2	6848317	6866635	chr2:6848317-6866635	0	-	6848317	6848317	789624	5	1656,234,202,115,210,	0,3132,12866,15146,18108,
#Partially deleted in new
chr2	6849888	6862065	chr2:6849888-6862065	0	-	6849888	6849888	8553170	4	85,234,202,48,	0,1561,11295,12129,
#Partially deleted in new
chr2	6849904	6866511	chr2:6849904-6866511	0	-	6849904	6849904	8553170	5	69,234,202,115,102,	0,1545,11279,13559,16505,
#Partially deleted in new
chr2	6850649	6865712	chr2:6850649-6865712	1	-	6851445	6865696	789624	4	1034,202,115,691,	0,10534,12814,14372,
#Deleted in new
chr2	6861257	6866635	chr2:6861257-6866635	0	-	6861257	6861257	8553170	4	128,115,112,210,	0,2206,3074,5168,
#Partially deleted in new
chr2	6865805	6877244	chr2:6865805-6877244	0	+	6865805	6865805	8553170	2	240,529,	0,10910,
#Partially deleted in new
chr2	6865827	6887053	chr2:6865827-6887053	0	+	6865903	6887053	789624	3	218,162,119,	0,17543,21107,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	6877664	6898239	chr2:6877664-6898239	3	+	6877800	6895942	789624	6	482,162,230,150,33,2462,	0,5706,9270,12511,16006,18113,
#Partially deleted in new
chr2	6878022	6883830	chr2:6878022-6883830	0	+	6878022	6878022	8553170	2	124,460,	0,5348,
#Partially deleted in new
chr2	6878793	6887093	chr2:6878793-6887093	0	+	6878793	6878793	8553170	3	248,162,159,	0,4577,8141,
#Deleted in new
chr2	6905723	6906301	chr2:6905723-6906301	3	-	6905723	6905723	8553170	1	578,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	6912276	6918709	chr2:6912276-6918709	3	-	6912276	6912276	789624	5	1388,158,145,375,308,	0,1916,3546,4573,6125,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	6913626	6918667	chr2:6913626-6918667	1	-	6913626	6913626	8553170	3	38,158,383,	0,566,4658,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	6914551	6918682	chr2:6914551-6918682	0	-	6914551	6914551	8553170	2	2673,281,	0,3850,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	6916850	6918663	chr2:6916850-6918663	1	-	6916850	6916850	8553170	2	374,383,	0,1430,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	6917031	6918709	chr2:6917031-6918709	1	-	6917031	6917031	8553170	2	193,425,	0,1253,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	6917391	7044182	chr2:6917391-7044182	3	+	6996926	7039760	0	9	231,200,146,105,61,208,148,90,4554,	0,23556,79524,97062,97320,103081,106977,112734,122237,
#Partially deleted in new
chr2	6917488	7039660	chr2:6917488-7039660	0	+	6917488	6917488	8553170	6	134,200,296,148,90,32,	0,23459,102984,106880,112637,122140,
#Partially deleted in new
chr2	6933042	7014483	chr2:6933042-7014483	0	+	6996926	7014483	789624	4	188,200,146,30,	0,7905,63873,81411,
#Partially deleted in new
chr2	6933083	7024396	chr2:6933083-7024396	0	+	6933083	6933083	8553170	4	147,200,208,28,	0,7864,87389,91285,
#Partially deleted in new
chr2	6978623	7014483	chr2:6978623-7014483	0	+	6996926	7014483	789624	3	216,146,30,	0,18292,35830,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	6996748	7020577	chr2:6996748-7020577	0	+	6996748	6996748	8553170	4	313,105,61,105,	0,17705,17963,23724,
#Partially deleted in new
chr2	6996939	7068286	chr2:6996939-7068286	0	+	6996939	7068275	789624	7	122,105,61,208,148,90,71,	0,17514,17772,23533,27429,33186,71276,
#Partially deleted in new
chr2	7062345	7077880	chr2:7062345-7077880	3	-	7062345	7062345	8553170	6	67,252,214,120,165,510,	0,317,10795,11399,14536,15025,
#Partially deleted in new
chr2	7062726	7077880	chr2:7062726-7077880	0	-	7062726	7062726	789624	3	188,165,177,	0,14155,14977,
#Partially deleted in new
chr2	7074503	7077880	chr2:7074503-7077880	0	-	7074503	7074503	8553170	3	213,165,177,	0,2378,3200,
#Deleted in new
chr2	7077039	7077901	chr2:7077039-7077901	0	-	7077039	7077039	8553170	2	7,555,	0,307,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	7141226	7141544	chr2:7141226-7141544	3	-	7141226	7141226	8553170	1	318,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	7260870	7261504	chr2:7260870-7261504	3	+	7260870	7260870	8553170	1	634,	0,
#Deleted in new
chr2	7324747	7325062	chr2:7324747-7325062	7	-	7324747	7324747	16724991	1	315,	0,
#Partially deleted in new
chr2	7421260	7445890	chr2:7421260-7445890	0	+	7421260	7421260	8553170	5	127,169,69,93,11,	0,5590,7127,14744,24619,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	7421264	7450254	chr2:7421264-7450254	3	+	7421264	7421264	8553170	7	123,169,69,1330,114,77,371,	0,5586,7123,7278,8915,24615,28619,
#Partially deleted in new
chr2	7421270	7450254	chr2:7421270-7450254	0	+	7421270	7421270	789624	6	117,169,69,114,77,371,	0,5580,7117,8909,24609,28613,
#Deleted in new
chr2	7421285	7423045	chr2:7421285-7423045	0	+	7421285	7421285	8553170	2	102,473,	0,1287,
#Deleted in new
chr2	7421291	7422835	chr2:7421291-7422835	1	+	7421291	7421291	8553170	3	96,159,263,	0,393,1281,
#Partially deleted in new
chr2	7429922	7449914	chr2:7429922-7449914	0	+	7429922	7429922	8553170	3	371,77,31,	0,15957,19961,
#Deleted in new
chr2	7576840	7576971	chr2:7576840-7576971	3	+	7576840	7576840	8553170	1	131,	0,
#Deleted in new
chr2	7671603	7672246	chr2:7671603-7672246	3	-	7671603	7671603	8553170	2	304,165,	0,478,
#Partially deleted in new
chr2	7725800	7730705	chr2:7725800-7730705	3	+	7725800	7725800	8553170	2	53,190,	0,4715,
#Deleted in new
chr2	7735644	7735783	chr2:7735644-7735783	7	-	7735644	7735644	16724991	1	139,	0,
#Deleted in new
chr2	7736437	7737095	chr2:7736437-7737095	7	-	7736437	7736437	16724991	1	658,	0,
#Partially deleted in new
chr2	7886769	7899655	chr2:7886769-7899655	3	-	7886769	7886769	789624	6	293,35,74,108,174,50,	0,1005,2716,9295,10839,12836,
#Partially deleted in new
chr2	7889423	7897750	chr2:7889423-7897750	0	-	7889423	7889423	8553170	3	136,108,142,	0,6641,8185,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	7922424	7979310	chr2:7922424-7979310	3	-	7922424	7922424	789624	4	1924,135,138,39,	0,45720,54284,56847,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	7924153	8278084	chr2:7924153-8278084	0	-	7924153	7924153	8553170	4	195,138,67,346,	0,52555,55106,353585,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	8007770	8324630	chr2:8007770-8324630	3	-	8007770	8007770	789624	8	989,58,221,75,106,104,118,89,	0,52577,279567,286841,287003,289069,291905,316771,
#Partially deleted in new
chr2	8039933	8118324	chr2:8039933-8118324	0	-	8039933	8039933	8553170	3	415,58,118,	0,20414,78273,
#Partially deleted in new
chr2	8139401	8143269	chr2:8139401-8143269	3	+	8139401	8139401	8553170	2	83,364,	0,3504,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	8207142	8328419	chr2:8207142-8328419	1	-	8207142	8207142	789624	10	898,77,221,75,106,394,118,124,143,186,	0,36422,80195,87469,87631,89697,92533,105583,117399,121091,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	8488419	8505027	chr2:8488419-8505027	3	+	8488419	8488419	8553170	4	255,136,199,2801,	0,3349,6866,13807,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	8506445	8583798	chr2:8506445-8583798	0	-	8506445	8506445	8553170	5	192,231,142,137,82,	0,70465,72124,73465,77271,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	8506445	8592903	chr2:8506445-8592903	2	-	8506445	8506445	8553170	5	192,89,231,142,644,	0,38702,70465,72124,85814,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	8541076	8545236	chr2:8541076-8545236	1	-	8541076	8541076	8553170	4	1149,190,172,89,	0,1708,3154,4071,
#Partially deleted in new
chr2	8543591	8575501	chr2:8543591-8575501	0	-	8543591	8543591	8553170	3	811,89,136,	0,1556,31774,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	8559832	8583792	chr2:8559832-8583792	1	-	8559832	8559832	789624	6	8119,134,231,142,137,76,	0,10615,17078,18737,20078,23884,
#Partially deleted in new
chr2	8570330	8576955	chr2:8570330-8576955	0	-	8570330	8570330	8553170	2	251,45,	0,6580,
#Partially deleted in new
chr2	8600891	8622942	chr2:8600891-8622942	3	-	8600891	8600891	8553170	3	126,266,173,	0,6644,21878,
#Partially deleted in new
chr2	8603081	8603359	chr2:8603081-8603359	7	+	8603081	8603081	16724991	1	278,	0,
#Partially deleted in new
chr2	8666635	8678334	chr2:8666635-8678334	3	-	8666635	8666635	8553170	4	152,158,286,357,	0,6514,9108,11342,
#Partially deleted in new
chr2	8670983	8681863	chr2:8670983-8681863	1	-	8670983	8670983	789624	4	294,192,271,37,	0,597,2053,10843,
#Partially deleted in new
chr2	8671244	8675766	chr2:8671244-8675766	0	-	8671244	8671244	8553170	4	33,192,271,23,	0,336,1792,4499,
#Deleted in new
chr2	8677488	8678811	chr2:8677488-8678811	0	-	8677488	8677488	8553170	3	72,309,53,	0,489,1270,
#Deleted in new
chr2	8677776	8678644	chr2:8677776-8678644	0	-	8677776	8677776	8553170	2	510,66,	0,802,
#Deleted in new
chr2	8677853	8679056	chr2:8677853-8679056	0	-	8677853	8677853	8553170	2	433,19,	0,1184,
#Deleted in new
chr2	8677868	8678853	chr2:8677868-8678853	0	-	8677868	8677868	8553170	2	418,113,	0,872,
#Deleted in new
chr2	8678844	8684453	chr2:8678844-8684453	3	+	8682165	8682899	0	5	473,75,660,64,769,	0,2646,3009,3998,4840,
#Deleted in new
chr2	8681982	8684451	chr2:8681982-8684451	1	+	8682165	8682899	0	3	531,64,767,	0,860,1702,
#Deleted in new
chr2	8682055	8683007	chr2:8682055-8683007	1	+	8682165	8682899	0	2	458,165,	0,787,
#Deleted in new
chr2	8682779	8684031	chr2:8682779-8684031	0	+	8682779	8682779	8553170	2	127,347,	0,905,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr2	8721080	8837630	chr2:8721080-8837630	0	-	8727198	8827093	789624	30	4519,57,79,237,99,132,224,179,163,145,89,244,141,290,152,166,180,165,178,99,99,99,198,99,99,99,99,99,144,162,	0,5806,6108,12363,13574,15787,29031,30385,49589,55667,57558,57815,58593,64660,65125,67566,68799,69979,72729,75690,77121,79319,81849,85190,91314,92156,96537,97614,105905,116388,
#Partially deleted in new
chr2	8725559	8802971	chr2:8725559-8802971	0	-	8726892	8802971	789624	22	40,57,237,99,132,224,179,163,145,89,244,141,290,152,166,180,165,178,99,99,99,42,	0,1327,7884,9095,11308,24552,25906,45110,51188,53079,53336,54114,60181,60646,63087,64320,65500,68250,71211,72642,74840,77370,
#Partially deleted in new
chr2	8728856	8837625	chr2:8728856-8837625	3	-	8730719	8827093	789624	30	3126,237,99,132,57,114,224,179,163,145,89,244,141,290,152,166,180,165,178,99,99,99,198,99,99,99,99,99,144,146,	0,4587,5798,8011,18288,19030,21255,22609,41813,47891,49782,50039,50817,56884,57349,59790,61023,62203,64953,67914,69345,71543,74073,77414,83538,84380,88761,89838,98129,108623,
#Partially deleted in new
chr2	8728928	8837630	chr2:8728928-8837630	1	-	8730719	8827093	789624	29	3054,237,99,132,114,224,179,163,145,89,244,141,290,152,166,180,165,178,99,99,99,198,99,99,99,99,99,144,162,	0,4515,5726,7939,18958,21183,22537,41741,47819,49710,49967,50745,56812,57277,59718,60951,62131,64881,67842,69273,71471,74001,77342,83466,84308,88689,89766,98057,108540,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr2	8730200	8837596	chr2:8730200-8837596	0	-	8825910	8827093	789624	29	1782,237,99,132,224,179,163,145,89,244,141,290,152,166,180,165,178,99,99,99,198,99,99,99,99,99,171,144,117,	0,3243,4454,6667,19911,21265,40469,46547,48438,48695,49473,55540,56005,58446,59679,60859,63609,66570,68001,70199,72729,76070,82194,83036,87417,88494,95542,96785,107279,
#Partially deleted in new
chr2	8731952	8837612	chr2:8731952-8837612	0	-	8731952	8827093	789624	28	30,237,99,132,224,179,163,145,89,244,141,290,152,166,180,165,178,99,99,99,198,99,102,99,99,99,144,133,	0,1491,2702,4915,18159,19513,38717,44795,46686,46943,47721,53788,54253,56694,57927,59107,61857,64818,66249,68447,70977,74318,80442,81284,85665,86742,95033,105527,
#Partially deleted in new
chr2	8733608	8737289	chr2:8733608-8737289	0	-	8733608	8733608	8553170	3	72,99,422,	0,1046,3259,
#Partially deleted in new
chr2	8736867	8770736	chr2:8736867-8770736	0	-	8736867	8770736	789624	7	132,33,57,114,224,179,67,	0,3284,10277,11019,13244,14598,33802,
#Partially deleted in new
chr2	8746456	8770707	chr2:8746456-8770707	0	-	8749406	8770707	789624	5	1544,51,224,179,38,	0,2914,3655,5009,24213,
#Partially deleted in new
chr2	8757193	8837600	chr2:8757193-8837600	1	-	8757705	8827093	789624	23	594,163,145,89,244,141,290,152,166,180,165,178,99,99,99,198,99,102,99,99,99,144,121,	0,13476,19554,21445,21702,22480,28547,29012,31453,32686,33866,36616,39577,41008,43206,45736,49077,55201,56043,60424,61501,69792,80286,
#Partially deleted in new
chr2	8789983	8794316	chr2:8789983-8794316	0	-	8789983	8789983	8553170	3	76,165,507,	0,1076,3826,
#Partially deleted in new
chr2	8800206	8806378	chr2:8800206-8806378	0	-	8800206	8800206	8553170	3	292,198,108,	0,2723,6064,
#Partially deleted in new
chr2	8826701	8837613	chr2:8826701-8837613	0	-	8826701	8826701	8553170	2	428,134,	0,10778,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	8852689	9003813	chr2:8852689-9003813	3	-	8858678	9003614	789624	13	6215,152,133,65,104,193,184,55,56,96,78,146,274,	0,7923,9900,11480,15756,20418,24340,29821,35328,55931,90497,105807,150850,
#Partially deleted in new
chr2	8858348	8877134	chr2:8858348-8877134	0	-	8862312	8877134	789624	7	556,152,52,65,104,193,105,	0,2264,3922,5821,10097,14759,18681,
#Partially deleted in new
chr2	8858846	8862476	chr2:8858846-8862476	0	-	8858846	8858846	8553170	3	58,152,206,	0,1766,3424,
#Partially deleted in new
chr2	8858858	8861142	chr2:8858858-8861142	0	-	8858858	8858858	8553170	2	46,530,	0,1754,
#Partially deleted in new
chr2	8860694	9003658	chr2:8860694-9003658	0	-	8860694	8860694	8553170	13	70,52,133,65,104,193,184,55,56,96,78,146,119,	0,1576,1895,3475,7751,12413,16335,21816,27323,47926,82492,97802,142845,
#Partially deleted in new
chr2	8862325	8868508	chr2:8862325-8868508	0	-	8862325	8862325	8553170	3	397,65,63,	0,1844,6120,
#Partially deleted in new
chr2	8873107	9003709	chr2:8873107-9003709	0	-	8908650	9003614	789624	6	193,184,55,56,96,170,	0,3922,9403,14910,35513,130432,
#Partially deleted in new
chr2	8873193	8958590	chr2:8873193-8958590	0	-	8873193	8873193	8553170	7	107,227,55,56,96,78,94,	0,3793,9317,14824,35427,69993,85303,
#Partially deleted in new
chr2	8877121	9003665	chr2:8877121-9003665	0	-	8877121	9003614	789624	7	92,55,56,96,78,77,126,	0,5389,10896,31499,66065,97237,126418,
#Partially deleted in new
chr2	8908153	8958642	chr2:8908153-8958642	0	-	8908153	8908153	8553170	4	230,96,78,146,	0,467,35033,50343,
#Deleted in new
chr2	9018292	9018899	chr2:9018292-9018899	7	-	9018292	9018292	16724991	1	607,	0,
#Deleted in new
chr2	9081394	9081727	chr2:9081394-9081727	7	-	9081394	9081394	16724991	1	333,	0,
#Deleted in new
chr2	9103439	9104581	chr2:9103439-9104581	3	+	9103439	9103439	8553170	3	146,126,146,	0,595,996,
#Partially deleted in new
chr2	9104158	9105114	chr2:9104158-9105114	0	+	9104158	9104158	8553170	2	428,119,	0,837,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	9106592	9109865	chr2:9106592-9109865	3	+	9106592	9106592	8553170	1	3273,	0,
#Partially deleted in new
chr2	9115196	9116884	chr2:9115196-9116884	3	+	9115196	9115196	8553170	2	56,312,	0,1376,
#Partially deleted in new
chr2	9206764	9405678	chr2:9206764-9405678	3	+	9207104	9403327	789624	28	466,73,146,75,50,130,86,76,87,104,70,88,49,167,134,95,190,86,116,68,114,253,135,166,50,89,123,2426,	0,72552,90535,111759,113523,116356,121061,127973,128328,137767,137966,144043,149282,149414,151991,161660,167990,170143,172179,173976,178480,181529,184297,186717,193258,193977,194509,196488,
#Partially deleted in new
chr2	9206764	9405683	chr2:9206764-9405683	1	+	9207104	9403327	789624	27	466,73,146,75,50,130,86,76,87,104,70,88,49,167,134,95,190,86,116,68,114,253,166,50,89,123,2431,	0,72552,90535,111759,113523,116356,121061,127973,128328,137767,137966,144043,149282,149414,151991,161660,167990,170143,172179,173976,178480,181529,186717,193258,193977,194509,196488,
#Deleted in new
chr2	9271291	9271628	chr2:9271291-9271628	7	-	9271291	9271291	16724991	1	337,	0,
#Partially deleted in new
chr2	9323120	9358838	chr2:9323120-9358838	0	+	9323120	9358838	789624	11	130,86,76,87,9,104,70,88,49,167,83,	0,4705,11617,11972,12915,21411,21610,27687,32926,33058,35635,
#Partially deleted in new
chr2	9350458	9356303	chr2:9350458-9356303	0	+	9350458	9350458	8553170	3	437,49,125,	0,5588,5720,
#Partially deleted in new
chr2	9388293	9400769	chr2:9388293-9400769	0	+	9388293	9388293	8553170	4	253,166,50,28,	0,5188,11729,12448,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	9398840	9405677	chr2:9398840-9405677	0	+	9398840	9398840	8553170	4	1232,89,123,2425,	0,1901,2433,4412,
#Partially deleted in new
chr2	9403474	9423229	chr2:9403474-9423229	3	-	9406833	9418697	0	8	3431,150,93,137,79,107,111,751,	0,3974,4638,8794,10703,15151,16515,19004,
#Partially deleted in new
chr2	9405683	9423506	chr2:9405683-9423506	1	-	9406833	9418697	0	6	1222,93,137,79,107,134,	0,2429,6585,8494,12942,17689,
#Partially deleted in new
chr2	9405683	9423547	chr2:9405683-9423547	1	-	9406833	9418697	0	7	1222,150,93,137,79,107,175,	0,1765,2429,6585,8494,12942,17689,
#Partially deleted in new
chr2	9405693	9423456	chr2:9405693-9423456	0	-	9412232	9418697	789624	6	1212,93,338,79,107,84,	0,2419,6374,8484,12932,17679,
#Partially deleted in new
chr2	9406348	9423462	chr2:9406348-9423462	0	-	9406348	9406348	8553170	5	557,150,93,137,90,	0,1100,1764,5920,17024,
#Partially deleted in new
chr2	9406647	9423444	chr2:9406647-9423444	0	-	9406647	9406647	8553170	4	258,93,137,72,	0,1465,5621,16725,
#Partially deleted in new
chr2	9406659	9423500	chr2:9406659-9423500	0	-	9412360	9418697	789624	6	246,150,93,137,107,128,	0,789,1453,5609,11966,16713,
#Partially deleted in new
chr2	9406660	9423250	chr2:9406660-9423250	1	-	9407424	9418697	789624	6	938,93,137,79,107,772,	0,1452,5608,7517,11965,15818,
#Partially deleted in new
chr2	9406660	9408299	chr2:9406660-9408299	0	-	9406660	9406660	8553170	3	245,150,187,	0,788,1452,
#Partially deleted in new
chr2	9406660	9412717	chr2:9406660-9412717	0	-	9406660	9406660	8553170	3	245,93,449,	0,1452,5608,
#Partially deleted in new
chr2	9406666	9423480	chr2:9406666-9423480	1	-	9406833	9418697	0	7	239,93,137,79,107,111,108,	0,1446,5602,7511,11959,13323,16706,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	9406813	9408404	chr2:9406813-9408404	0	-	9406813	9406813	8553170	2	92,292,	0,1299,
#Partially deleted in new
chr2	9407029	9423430	chr2:9407029-9423430	1	-	9407424	9418697	789624	6	569,93,137,79,107,58,	0,1083,5239,7148,11596,16343,
#Partially deleted in new
chr2	9407542	9422566	chr2:9407542-9422566	0	-	9407542	9407542	8553170	6	56,93,137,79,111,88,	0,570,4726,6635,12447,14936,
#Partially deleted in new
chr2	9407571	9420294	chr2:9407571-9420294	0	-	9407571	9418697	789624	6	27,93,137,79,107,305,	0,541,4697,6606,11054,12418,
#Partially deleted in new
chr2	9408001	9423522	chr2:9408001-9423522	0	-	9408001	9408001	8553170	4	204,137,79,150,	0,4267,6176,15371,
#Partially deleted in new
chr2	9408151	9423176	chr2:9408151-9423176	0	-	9408151	9418697	789624	6	54,137,79,107,111,211,	0,4117,6026,10474,11838,14814,
#Partially deleted in new
chr2	9412268	9423087	chr2:9412268-9423087	0	-	9412268	9418697	789624	4	137,79,107,122,	0,1909,6357,10697,
#Partially deleted in new
chr2	9412296	9423340	chr2:9412296-9423340	0	-	9412296	9418697	789624	5	109,79,107,182,63,	0,1881,6329,10182,10981,
#Partially deleted in new
chr2	9412303	9423176	chr2:9412303-9423176	0	-	9412303	9418697	789624	4	102,79,107,375,	0,1874,6322,10498,
#Partially deleted in new
chr2	9412359	9423228	chr2:9412359-9423228	0	-	9412359	9418697	789624	4	46,79,107,427,	0,1818,6266,10442,
#Partially deleted in new
chr2	9423567	9473101	chr2:9423567-9473101	3	+	9423773	9473017	0	18	256,64,98,129,178,90,151,176,159,147,153,109,99,95,88,70,97,186,	0,5197,6355,7184,8943,10303,12643,16923,18250,19947,24630,29345,32091,33365,35963,44139,47775,49348,
#Partially deleted in new
chr2	9423650	9432688	chr2:9423650-9432688	0	+	9428825	9432688	789624	5	402,64,98,129,178,	0,5114,6272,7101,8860,
#Partially deleted in new
chr2	9423883	9473092	chr2:9423883-9473092	1	+	9428825	9473017	789624	18	1077,64,98,129,178,90,151,176,159,147,153,109,99,95,88,70,97,177,	0,4881,6039,6868,8627,9987,12327,16607,17934,19631,24314,29029,31775,33049,35647,43823,47459,49032,
#Partially deleted in new
chr2	9441729	9448350	chr2:9441729-9448350	0	+	9441729	9441729	8553170	3	247,147,153,	0,1785,6468,
#Partially deleted in new
chr2	9456976	9473098	chr2:9456976-9473098	0	+	9456976	9456976	8553170	5	51,88,269,97,183,	0,2554,10730,14366,15939,
#Partially deleted in new
chr2	9473657	9484548	chr2:9473657-9484548	0	+	9481341	9484548	789624	4	242,149,162,117,	0,4564,7628,10774,
#Partially deleted in new
chr2	9473817	9488444	chr2:9473817-9488444	1	+	9481341	9488329	789624	6	82,53,149,162,119,298,	0,2169,4404,7468,10614,14329,
#Partially deleted in new
chr2	9474529	9488811	chr2:9474529-9488811	3	+	9474566	9488329	789624	6	118,53,149,162,119,665,	0,1457,3692,6756,9902,13617,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	9474536	9489742	chr2:9474536-9489742	1	+	9481341	9488329	789624	5	111,149,162,119,1596,	0,3685,6749,9895,13610,
#Partially deleted in new
chr2	9474538	9488457	chr2:9474538-9488457	0	+	9474566	9478295	789624	5	109,117,162,119,311,	0,3715,6747,9893,13608,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	9474563	9486829	chr2:9474563-9486829	0	+	9474563	9474563	8553170	4	84,149,162,2398,	0,3658,6722,9868,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	9474574	9496543	chr2:9474574-9496543	0	+	9474574	9488329	789624	7	73,149,162,119,246,159,229,	0,3647,6711,9857,13572,20127,21740,
#Partially deleted in new
chr2	9474577	9488462	chr2:9474577-9488462	0	+	9474577	9478356	789624	6	70,53,117,162,119,316,	0,1409,3676,6708,9854,13569,
#Partially deleted in new
chr2	9474857	9488314	chr2:9474857-9488314	0	+	9475211	9484541	789624	6	360,53,149,162,119,168,	0,1129,3364,6428,9574,13289,
#Partially deleted in new
chr2	9475021	9488237	chr2:9475021-9488237	0	+	9475021	9475021	8553170	7	126,53,149,162,119,92,91,	0,965,3200,6264,9410,12434,13125,
#Partially deleted in new
chr2	9475054	9484467	chr2:9475054-9484467	0	+	9481341	9484467	789624	4	163,117,162,36,	0,3199,6231,9377,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	9475673	9484512	chr2:9475673-9484512	0	+	9475673	9475673	8553170	4	366,149,162,81,	0,2548,5612,8758,
#Partially deleted in new
chr2	9480870	9488495	chr2:9480870-9488495	0	+	9480870	9480870	8553170	4	33,162,119,349,	0,415,3561,7276,
#Partially deleted in new
chr2	9481283	9488622	chr2:9481283-9488622	0	+	9481283	9481283	8553170	3	164,119,476,	0,3148,6863,
#Partially deleted in new
chr2	9488144	9489029	chr2:9488144-9489029	0	+	9488144	9488144	8553170	2	248,52,	0,833,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr2	9488485	9555830	chr2:9488485-9555830	1	-	9490176	9555605	0	19	2033,51,89,79,131,135,104,200,153,89,145,114,90,134,169,89,131,133,322,	0,2615,4412,5261,6151,8628,13687,16680,21493,29415,29617,32717,34763,37625,39300,47348,48212,54667,67023,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr2	9488485	9555852	chr2:9488485-9555852	3	-	9490176	9555605	789624	19	2033,51,89,79,131,135,104,200,153,89,145,114,90,134,169,89,131,133,344,	0,2615,4412,5261,6151,8628,13687,16680,21493,29415,29617,32717,34763,37625,39300,47348,48212,54667,67023,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr2	9489287	9555788	chr2:9489287-9555788	0	-	9536819	9555605	8553170	19	1231,51,89,79,131,135,104,200,153,89,145,114,90,134,169,89,131,74,280,	0,1813,3610,4459,5349,7826,12885,15878,20691,28613,28815,31915,33961,36823,38498,46546,47410,53865,66221,
#Partially deleted in new
chr2	9489394	9556732	chr2:9489394-9556732	0	-	9489394	9489394	8553170	19	1124,51,89,79,131,135,104,200,153,89,145,119,90,154,169,89,131,133,142,	0,1706,3503,4352,5242,7719,12778,15771,20584,28506,28708,31808,33854,36716,38391,46439,47303,53758,67196,
#Partially deleted in new
chr2	9489588	9555734	chr2:9489588-9555734	0	-	9527934	9555605	8553170	16	930,51,89,79,131,135,104,200,153,89,145,114,90,134,169,226,	0,1512,3309,4158,5048,7525,12584,15577,20390,28312,28514,31614,33660,36522,38197,65920,
#Partially deleted in new
chr2	9489810	9555700	chr2:9489810-9555700	0	-	9527934	9555605	8553170	15	708,51,89,79,131,135,104,200,153,89,145,114,154,169,192,	0,1290,3087,3936,4826,7303,12362,15355,20168,28090,28292,31392,36300,37975,65698,
#Partially deleted in new
chr2	9489856	9555671	chr2:9489856-9555671	0	-	9536819	9555605	8553170	19	662,51,89,79,131,135,104,200,153,89,145,114,90,154,169,89,131,65,163,	0,1244,3041,3890,4780,7257,12316,15309,20122,28044,28246,31346,33392,36254,37929,45977,46841,53364,65652,
#Partially deleted in new
chr2	9490358	9493153	chr2:9490358-9493153	0	-	9490358	9490358	8553170	3	160,51,256,	0,742,2539,
#Partially deleted in new
chr2	9493788	9538077	chr2:9493788-9538077	0	-	9493788	9493788	8553170	15	37,131,135,104,200,153,89,145,114,90,154,169,89,131,20,	0,848,3325,8384,11377,16190,24112,24314,27414,29460,32322,33997,42045,42909,44269,
#Partially deleted in new
chr2	9497004	9505318	chr2:9497004-9505318	0	-	9497004	9497004	8553170	3	244,104,153,	0,5168,8161,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	9499206	9555784	chr2:9499206-9555784	0	-	9499206	9499206	8553170	12	3070,153,89,145,1236,90,134,169,89,131,133,276,	0,10772,18694,18896,21996,24042,26904,28579,36627,37491,43946,56302,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	9499437	9555778	chr2:9499437-9555778	0	-	9499437	9499437	8553170	13	2839,200,153,89,145,2136,154,169,89,131,133,65,270,	0,5728,10541,18463,18665,21765,26673,28348,36396,37260,43715,44258,56071,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	9499491	9551514	chr2:9499491-9551514	0	-	9499491	9499491	8553170	14	2459,104,200,153,89,145,119,90,134,169,89,131,133,40,	0,2681,5674,10487,18409,18611,21711,23757,26619,28294,36342,37206,43661,51983,
#Partially deleted in new
chr2	9505444	9512412	chr2:9505444-9512412	0	+	9505444	9505444	8553170	2	166,96,	0,6872,
#Partially deleted in new
chr2	9505444	9512412	chr2:9505444-9512412	3	+	9505444	9505444	8553170	3	166,229,96,	0,1342,6872,
#Partially deleted in new
chr2	9521595	9555792	chr2:9521595-9555792	0	-	9523324	9555605	789624	8	843,100,134,169,89,131,133,284,	0,1653,4515,6190,14238,15102,21557,33913,
#Partially deleted in new
chr2	9527500	9555774	chr2:9527500-9555774	0	-	9527500	9527500	8553170	5	454,89,131,133,266,	0,8333,9197,15652,28008,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	9529487	9543271	chr2:9529487-9543271	0	-	9529597	9543271	8553170	4	317,89,131,119,	0,6346,7210,13665,
#Deleted in new
chr2	9555898	9556775	chr2:9555898-9556775	3	+	9555898	9555898	8553170	1	877,	0,
#Partially deleted in new
chr2	9583971	9631014	chr2:9583971-9631014	3	-	9585285	9630452	0	6	1374,96,164,124,376,74,	0,3442,4193,7420,46187,46969,
#Partially deleted in new
chr2	9583971	9630616	chr2:9583971-9630616	1	-	9585285	9630452	0	5	1374,96,164,124,458,	0,3442,4193,7420,46187,
#Partially deleted in new
chr2	9585080	9620701	chr2:9585080-9620701	0	-	9585080	9585080	8553170	5	265,96,164,124,60,	0,2333,3084,6311,35561,
#Partially deleted in new
chr2	9588297	9630946	chr2:9588297-9630946	0	-	9588297	9630452	789624	4	31,124,376,134,	0,3094,41861,42515,
#Deleted in new
chr2	9628702	9630268	chr2:9628702-9630268	0	-	9628702	9628702	8553170	2	235,110,	0,1456,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	9674022	9708413	chr2:9674022-9708413	3	+	9674022	9674022	8553170	5	198,99,147,1095,313,	0,10335,11651,18450,34078,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	9740642	9740783	chr2:9740642-9740783	3	-	9740642	9740642	8553170	1	141,	0,
#Deleted in new
chr2	9746703	9746869	chr2:9746703-9746869	7	+	9746703	9746703	16724991	1	166,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	9757495	9770341	chr2:9757495-9770341	3	-	9757495	9757495	8553170	2	1804,143,	0,12703,
#Partially deleted in new
chr2	9843353	9934416	chr2:9843353-9934416	3	+	9843541	9933984	789624	15	206,99,88,98,96,154,154,100,148,178,47,91,71,223,634,	0,1866,6019,8187,10972,24922,32511,39352,61505,67382,68157,69805,75687,76244,90429,
#Partially deleted in new
chr2	9843442	9846113	chr2:9843442-9846113	1	+	9843541	9846113	789624	3	117,99,57,	0,1777,2614,
#Partially deleted in new
chr2	9843481	9868764	chr2:9843481-9868764	0	+	9843481	9843481	8553170	7	78,99,88,98,96,154,102,	0,1738,5891,8059,10844,24794,25181,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	9843496	9852124	chr2:9843496-9852124	0	+	9843496	9843496	8553170	5	63,99,88,98,157,	0,1723,5876,8044,8471,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	9843518	9845820	chr2:9843518-9845820	0	+	9843518	9843518	8553170	2	41,601,	0,1701,
#Partially deleted in new
chr2	9843524	9933946	chr2:9843524-9933946	0	+	9843541	9882737	789624	14	35,99,88,98,96,154,100,148,178,47,91,71,223,164,	0,1695,5848,8016,10801,24751,39181,61334,67211,67986,69634,75516,76073,90258,
#Partially deleted in new
chr2	9843526	9849407	chr2:9843526-9849407	0	+	9843541	9846113	789624	4	33,99,130,35,	0,1693,2530,5846,
#Partially deleted in new
chr2	9843584	9868416	chr2:9843584-9868416	0	+	9843584	9843584	8553170	6	159,99,88,98,96,141,	0,1635,5788,7956,10741,24691,
#Partially deleted in new
chr2	9843702	9868376	chr2:9843702-9868376	0	+	9843702	9843702	8553170	6	72,99,88,98,96,101,	0,1517,5670,7838,10623,24573,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	9843722	9852114	chr2:9843722-9852114	0	+	9843722	9843722	8553170	6	52,136,99,88,98,147,	0,619,1497,5650,7818,8245,
#Partially deleted in new
chr2	9875997	9913709	chr2:9875997-9913709	0	+	9875997	9913313	789624	6	21,100,148,178,47,551,	0,6708,28861,34738,35513,37161,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	9936359	9939590	chr2:9936359-9939590	3	+	9936359	9936359	8553170	1	3231,	0,
#Partially deleted in new
chr2	9951692	9961082	chr2:9951692-9961082	0	+	9951833	9958860	789624	4	161,187,179,37,	0,3222,7093,9353,
#Partially deleted in new
chr2	9951692	10000731	chr2:9951692-10000731	0	+	9953031	9963897	789624	16	161,154,187,71,391,157,112,95,159,52,140,38,92,86,65,139,	0,1214,3222,7093,9353,12193,12542,13594,34431,39003,40314,41514,44186,44623,47272,48900,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	9951692	9966401	chr2:9951692-9966401	0	+	9951692	9951692	8553170	6	161,187,2651,77,157,2167,	0,3222,7093,10762,12193,12542,
#Partially deleted in new
chr2	9951697	10002277	chr2:9951697-10002277	3	+	9951833	10000707	0	16	156,187,71,391,77,157,112,95,159,52,140,38,92,86,65,1685,	0,3217,7088,9348,10757,12188,12537,13589,34426,38998,40309,41509,44181,44618,47267,48895,
#Partially deleted in new
chr2	9951781	10000832	chr2:9951781-10000832	0	+	9951833	9995889	0	16	72,187,71,391,77,157,112,95,159,78,140,38,92,86,65,240,	0,3133,7004,9264,10673,12104,12453,13505,34342,38914,40225,41425,44097,44534,47183,48811,
#Partially deleted in new
chr2	9960963	9964307	chr2:9960963-9964307	0	+	9960963	9960963	8553170	4	473,77,157,73,	0,1491,2922,3271,
#Partially deleted in new
chr2	9961164	10001205	chr2:9961164-10001205	1	+	9961257	10000707	0	12	272,157,112,95,159,52,140,38,92,86,65,613,	0,2721,3070,4122,24959,29531,30842,32042,34714,35151,37800,39428,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	9995305	10000866	chr2:9995305-10000866	1	+	9996362	10000707	789624	5	55,92,86,65,274,	0,573,1010,3659,5287,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	10003157	10006030	chr2:10003157-10006030	3	-	10003157	10003157	8553170	2	928,1484,	0,1389,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	10021577	10022825	chr2:10021577-10022825	3	+	10021577	10021577	8553170	1	1248,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	10039091	10040663	chr2:10039091-10040663	3	-	10039091	10039091	8553170	1	1572,	0,
#Partially deleted in new
chr2	10042848	10047770	chr2:10042848-10047770	0	+	10046158	10047770	789624	3	223,270,121,	0,3301,4801,
#Partially deleted in new
chr2	10043554	10054836	chr2:10043554-10054836	3	+	10043716	10052507	0	4	204,270,946,2610,	0,2595,4095,8672,
#Partially deleted in new
chr2	10043828	10047879	chr2:10043828-10047879	0	+	10046158	10047879	789624	3	59,270,230,	0,2321,3821,
#Partially deleted in new
chr2	10043828	10054836	chr2:10043828-10054836	1	+	10046158	10052507	0	4	59,270,946,2610,	0,2321,3821,8398,
#Partially deleted in new
chr2	10044174	10047755	chr2:10044174-10047755	0	+	10046158	10047755	789624	3	277,270,106,	0,1975,3475,
#Partially deleted in new
chr2	10044244	10054836	chr2:10044244-10054836	1	+	10046158	10052507	0	4	207,270,946,2610,	0,1905,3405,7982,
#Deleted in new
chr2	10054420	10054866	chr2:10054420-10054866	3	-	10054420	10054420	8553170	1	446,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	10056779	10080411	chr2:10056779-10080411	3	-	10058852	10080223	789624	3	2179,53,506,	0,9124,23126,
#Partially deleted in new
chr2	10058613	10080944	chr2:10058613-10080944	0	-	10058613	10058613	8553170	3	345,53,109,	0,7290,22222,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	10083780	10086101	chr2:10083780-10086101	3	+	10083780	10083780	8553170	3	165,65,82,	0,1364,2239,
#Deleted in new
chr2	10090204	10090319	chr2:10090204-10090319	3	-	10090204	10090204	8553170	1	115,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	10120697	10131418	chr2:10120697-10131418	3	+	10122798	10129386	0	11	185,143,75,144,117,134,95,134,105,114,2185,	0,2057,2285,2689,3038,4019,6177,6389,8150,8343,8536,
#Deleted in new
chr2	10120733	10121065	chr2:10120733-10121065	0	+	10120733	10120733	8553170	1	332,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	10122327	10131418	chr2:10122327-10131418	1	+	10122618	10129386	0	10	570,75,144,117,134,95,134,105,114,2185,	0,655,1059,1408,2389,4547,4759,6520,6713,6906,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	10122567	10131419	chr2:10122567-10131419	1	+	10122618	10129386	0	10	330,75,144,117,134,95,134,105,114,2186,	0,415,819,1168,2149,4307,4519,6280,6473,6666,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	10122711	10124117	chr2:10122711-10124117	0	+	10122711	10122711	8553170	4	186,75,144,382,	0,271,675,1024,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	10122729	10131418	chr2:10122729-10131418	1	+	10122798	10129386	0	10	168,75,144,117,134,95,134,105,114,2185,	0,253,657,1006,1987,4145,4357,6118,6311,6504,
#Partially deleted in new
chr2	10122738	10123852	chr2:10122738-10123852	0	+	10122738	10122738	8553170	3	319,144,117,	0,648,997,
#Partially deleted in new
chr2	10122738	10123712	chr2:10122738-10123712	0	+	10122738	10122738	8553170	3	159,75,326,	0,244,648,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	10122738	10199288	chr2:10122738-10199288	3	+	10122798	10142261	789624	12	159,75,144,117,134,95,134,105,114,101,121,697,	0,244,648,997,1978,4136,4348,6109,6302,19115,19516,75853,
#Partially deleted in new
chr2	10122751	10124878	chr2:10122751-10124878	0	+	10122751	10122751	8553170	5	146,75,144,117,162,	0,231,635,984,1965,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	10123170	10129155	chr2:10123170-10129155	0	+	10123362	10129155	789624	7	360,117,134,95,134,105,115,	0,565,1546,3704,3916,5677,5870,
#Deleted in new
chr2	10126511	10127220	chr2:10126511-10127220	0	+	10126511	10126511	8553170	2	458,134,	0,575,
#Deleted in new
chr2	10126790	10127361	chr2:10126790-10127361	0	+	10126790	10126790	8553170	2	179,275,	0,296,
#Partially deleted in new
chr2	10126829	10129313	chr2:10126829-10129313	0	+	10126829	10126829	8553170	5	140,134,105,114,80,	0,257,2018,2211,2404,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	10129098	10156261	chr2:10129098-10156261	0	+	10129098	10142261	789624	4	56,101,121,633,	0,12755,13156,26530,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	10141381	10211725	chr2:10141381-10211725	3	+	10141381	10141381	8553170	4	260,101,121,1415,	0,472,873,68929,
#Partially deleted in new
chr2	10141882	10210597	chr2:10141882-10210597	0	+	10141882	10141882	8553170	3	72,121,287,	0,372,68428,
#Partially deleted in new
chr2	10142324	10146132	chr2:10142324-10146132	1	+	10142324	10142324	8553170	2	51,605,	0,3203,
#Deleted in new
chr2	10155071	10155206	chr2:10155071-10155206	3	-	10155071	10155071	8553170	1	135,	0,
#Deleted in new
chr2	10192613	10192671	chr2:10192613-10192671	3	-	10192613	10192613	5263520	1	58,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	10280627	10280891	chr2:10280627-10280891	3	+	10280627	10280627	8553170	1	264,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	10287799	10302485	chr2:10287799-10302485	3	-	10287799	10287799	8553170	4	682,109,172,908,	0,1307,13042,13778,
#Partially deleted in new
chr2	10296046	10296180	chr2:10296046-10296180	3	-	10296046	10296046	8553170	1	134,	0,
#Partially deleted in new
chr2	10302888	10419847	chr2:10302888-10419847	0	+	10419757	10419847	789624	4	289,86,97,114,	0,93946,103376,116845,
#Partially deleted in new
chr2	10302906	10427609	chr2:10302906-10427609	3	+	10419757	10426821	0	5	271,86,402,106,886,	0,93928,116827,120076,123817,
#Partially deleted in new
chr2	10303699	10427617	chr2:10303699-10427617	1	+	10419757	10426821	0	6	243,86,173,402,106,894,	0,93135,104862,116034,119283,123024,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	10324346	10427352	chr2:10324346-10427352	0	+	10419757	10423132	789624	8	50,166,86,173,402,2999,276,629,	0,29869,72488,84215,95387,98636,101873,102377,
#Partially deleted in new
chr2	10330162	10427616	chr2:10330162-10427616	1	+	10419757	10426821	0	5	48,86,402,106,893,	0,66672,89571,92820,96561,
#Partially deleted in new
chr2	10368677	10427616	chr2:10368677-10427616	1	+	10419757	10426821	0	5	60,86,402,106,893,	0,28157,51056,54305,58046,
#Partially deleted in new
chr2	10368763	10427616	chr2:10368763-10427616	1	+	10419757	10426821	0	5	454,86,402,106,893,	0,28071,50970,54219,57960,
#Partially deleted in new
chr2	10420020	10427000	chr2:10420020-10427000	0	+	10420020	10424613	789624	4	115,106,89,277,	0,2962,4504,6703,
#Partially deleted in new
chr2	10439967	10448504	chr2:10439967-10448504	3	-	10440723	10445032	0	12	901,215,113,163,84,82,135,173,174,119,110,384,	0,1541,1849,2044,3262,3522,3734,4127,4506,4963,5187,8153,
#Partially deleted in new
chr2	10440600	10447780	chr2:10440600-10447780	1	-	10440723	10445032	0	12	268,215,113,163,84,82,135,173,174,119,110,307,	0,908,1216,1411,2629,2889,3101,3494,3873,4330,4554,6873,
#Partially deleted in new
chr2	10444094	10448309	chr2:10444094-10448309	0	-	10444094	10444094	8553170	5	173,74,119,110,189,	0,379,836,1060,4026,
#Partially deleted in new
chr2	10444543	10447788	chr2:10444543-10447788	0	-	10444543	10445032	789624	4	104,119,110,161,	0,387,611,3084,
#Partially deleted in new
chr2	10446713	10446849	chr2:10446713-10446849	3	-	10446713	10446713	789624	1	136,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	10448693	10451327	chr2:10448693-10451327	3	+	10448693	10448693	8553170	4	488,128,229,892,	0,1050,1359,1742,
#Partially deleted in new
chr2	10449727	10450794	chr2:10449727-10450794	0	+	10449727	10449727	8553170	3	144,229,359,	0,325,708,
#Partially deleted in new
chr2	10452318	10455552	chr2:10452318-10455552	3	+	10452318	10452318	8553170	4	151,190,23,130,	0,1550,2927,3104,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr2	10570765	10689972	chr2:10570765-10689972	1	-	10572070	10689861	789624	20	1425,103,248,174,90,99,80,127,53,67,79,86,61,66,137,38,78,99,46,177,	0,6870,18277,18812,30087,32010,32312,36419,73554,83715,88406,92193,96452,97892,100788,102754,105028,111205,113801,119030,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr2	10570767	10689987	chr2:10570767-10689987	1	-	10572070	10689861	789624	20	1423,103,248,174,90,99,80,127,53,67,150,79,86,61,66,137,38,99,46,192,	0,6868,18275,18810,30085,32008,32310,36417,73552,83713,86974,88404,92191,96450,97890,100786,102752,111203,113799,119028,
#Partially deleted in new
chr2	10571654	10689967	chr2:10571654-10689967	3	-	10572070	10689861	789624	21	536,103,248,174,90,99,80,127,53,67,150,79,86,61,66,137,38,78,99,46,172,	0,5981,17388,17923,29198,31121,31423,35530,72665,82826,86087,87517,91304,95563,97003,99899,101865,104139,110316,112912,118141,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	10589165	10604830	chr2:10589165-10604830	3	+	10589165	10589165	8553170	4	140,118,165,142,	0,484,1684,15523,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	10622022	10671690	chr2:10622022-10671690	0	-	10622090	10671690	789624	9	128,53,67,150,79,86,61,66,137,	0,22297,32458,35719,37149,40936,45195,46635,49531,
#Partially deleted in new
chr2	10673321	10689975	chr2:10673321-10689975	0	-	10673321	10673321	8553170	4	236,78,99,180,	0,2472,8649,16474,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	10690343	10692099	chr2:10690343-10692099	3	+	10690343	10690343	8553170	1	1756,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	10691537	10691831	chr2:10691537-10691831	3	+	10691537	10691537	8553170	1	294,	0,
#Partially deleted in new
chr2	10717772	10720952	chr2:10717772-10720952	3	+	10717772	10717772	8553170	5	164,130,211,48,15,	0,431,887,1262,3165,
#Partially deleted in new
chr2	10721099	10778652	chr2:10721099-10778652	0	+	10722849	10778652	8553170	12	77,155,68,86,95,92,99,69,93,94,138,81,	0,1724,5402,32881,43231,47619,50739,51442,53688,53878,56485,57472,
#Partially deleted in new
chr2	10721648	10783435	chr2:10721648-10783435	1	+	10722849	10783263	789624	14	83,155,68,86,95,92,99,69,93,94,138,98,133,262,	0,1175,4853,32332,42682,47070,50190,50893,53139,53329,55936,56923,60594,61525,
#Partially deleted in new
chr2	10721648	10785110	chr2:10721648-10785110	3	+	10722849	10783263	789624	13	83,155,68,86,95,92,99,69,93,94,98,133,1937,	0,1175,4853,32332,42682,47070,50190,50893,53139,53329,56923,60594,61525,
#Partially deleted in new
chr2	10722771	10783449	chr2:10722771-10783449	1	+	10722849	10783263	789624	14	207,68,86,30,95,92,99,69,93,94,138,98,133,276,	0,3730,31209,34655,41559,45947,49067,49770,52016,52206,54813,55800,59471,60402,
#Deleted in new
chr2	10744185	10744249	chr2:10744185-10744249	3	+	10744185	10744185	8553170	1	64,	0,
#Partially deleted in new
chr2	10767874	10770058	chr2:10767874-10770058	3	-	10767874	10767874	8553170	3	322,9,62,	0,910,2122,
#Partially deleted in new
chr2	10778487	10783243	chr2:10778487-10783243	0	+	10778487	10778487	8553170	3	182,133,70,	0,3755,4686,
#Partially deleted in new
chr2	10783390	10812844	chr2:10783390-10812844	1	-	10784257	10812696	0	13	936,97,159,73,85,141,115,131,107,127,58,142,167,	0,1543,3890,5306,5506,6358,7328,8404,9705,13690,14309,19108,29287,
#Partially deleted in new
chr2	10783392	10832485	chr2:10783392-10832485	1	-	10784257	10819307	0	14	934,97,159,73,85,141,115,131,107,127,58,142,81,284,	0,1541,3888,5304,5504,6356,7326,8402,9703,13688,14307,19106,35881,48809,
#Partially deleted in new
chr2	10783392	10832485	chr2:10783392-10832485	1	-	10784257	10820864	0	15	934,97,159,73,85,141,115,131,107,127,58,142,81,148,284,	0,1541,3888,5304,5504,6356,7326,8402,9703,13688,14307,19106,35881,37378,48809,
#Partially deleted in new
chr2	10783392	10812839	chr2:10783392-10812839	1	-	10784257	10810252	0	14	934,97,159,73,85,141,115,131,107,127,58,142,178,162,	0,1541,3888,5304,5504,6356,7326,8402,9703,13688,14307,19106,26850,29285,
#Partially deleted in new
chr2	10783392	10820864	chr2:10783392-10820864	1	-	10784257	10820864	0	14	934,97,159,73,85,141,115,131,107,127,58,142,81,94,	0,1541,3888,5304,5504,6356,7326,8402,9703,13688,14307,19106,35881,37378,
#Partially deleted in new
chr2	10783860	10837977	chr2:10783860-10837977	3	-	10784257	10837605	0	14	466,97,159,73,85,141,115,131,107,127,58,142,81,454,	0,1073,3420,4836,5036,5888,6858,7934,9235,13220,13839,18638,35413,53663,
#Partially deleted in new
chr2	10797098	10812754	chr2:10797098-10812754	0	-	10797098	10797098	8553170	5	109,58,142,178,77,	0,601,5400,13144,15579,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	10815484	10815546	chr2:10815484-10815546	3	-	10815484	10815484	8553170	1	62,	0,
#Partially deleted in new
chr2	10819273	10832340	chr2:10819273-10832340	0	-	10819273	10819307	789624	5	81,148,338,280,139,	0,1497,1908,3846,12928,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	10847576	10854955	chr2:10847576-10854955	3	+	10847576	10847576	8553170	3	35,261,93,	0,6763,7286,
#Deleted in new
chr2	10874290	10874567	chr2:10874290-10874567	7	-	10874290	10874290	16724991	1	277,	0,
#Partially deleted in new
chr2	10878268	10885118	chr2:10878268-10885118	3	+	10878268	10878268	789624	2	176,285,	0,6565,
#Deleted in new
chr2	10911936	10914225	chr2:10911936-10914225	3	+	10912426	10913911	789624	1	2289,	0,
#Deleted in new
chr2	11102141	11102997	chr2:11102141-11102997	7	+	11102141	11102141	16724991	1	856,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	11105316	11132176	chr2:11105316-11132176	3	-	11105316	11105316	789624	8	346,92,200,138,203,166,115,162,	0,1379,15446,17835,19266,23404,23667,26698,
#Partially deleted in new
chr2	11105316	11132221	chr2:11105316-11132221	0	-	11105316	11105316	8553170	5	346,200,203,166,224,	0,15446,19266,23404,26681,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	11124218	11132770	chr2:11124218-11132770	1	-	11124218	11124218	8553170	5	567,166,115,126,498,	0,4502,4765,5108,8054,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	11124757	11132821	chr2:11124757-11132821	0	-	11124757	11124757	8553170	2	28,549,	0,7515,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	11128538	11132108	chr2:11128538-11132108	0	-	11128538	11128538	8553170	3	348,115,111,	0,445,3459,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	11133052	11146024	chr2:11133052-11146024	1	+	11133334	11144111	789624	3	539,40,2105,	0,7457,10867,
#Partially deleted in new
chr2	11133128	11146790	chr2:11133128-11146790	3	+	11133334	11144111	789624	4	463,40,223,254,	0,7381,10791,13408,
#Partially deleted in new
chr2	11155197	11172046	chr2:11155197-11172046	0	+	11155217	11172046	789624	6	69,163,83,70,58,122,	0,329,5268,5427,9006,16727,
#Partially deleted in new
chr2	11155371	11178874	chr2:11155371-11178874	3	+	11155546	11177828	789624	7	318,83,70,58,121,42,1138,	0,5094,5253,8832,16553,19596,22365,
#Partially deleted in new
chr2	11155371	11178870	chr2:11155371-11178870	1	+	11155546	11177828	789624	6	318,83,70,58,121,1134,	0,5094,5253,8832,16553,22365,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	11155430	11177957	chr2:11155430-11177957	0	+	11155546	11172785	789624	8	259,83,70,58,121,74,42,221,	0,5035,5194,8773,16494,17320,19537,22306,
#Partially deleted in new
chr2	11155514	11160819	chr2:11155514-11160819	0	+	11155514	11155514	8553170	3	175,83,195,	0,4951,5110,
#Partially deleted in new
chr2	11155532	11172029	chr2:11155532-11172029	0	+	11155532	11155532	8553170	4	157,83,124,105,	0,4933,5092,16392,
#Partially deleted in new
chr2	11155534	11178024	chr2:11155534-11178024	1	+	11155546	11174976	789624	6	155,83,70,58,42,288,	0,4931,5090,8669,19433,22202,
#Partially deleted in new
chr2	11155608	11178279	chr2:11155608-11178279	0	+	11155608	11160707	789624	4	81,83,124,543,	0,4857,5016,22128,
#Partially deleted in new
chr2	11160289	11160753	chr2:11160289-11160753	0	+	11160289	11160289	8553170	2	259,129,	0,335,
#Partially deleted in new
chr2	11172011	11178168	chr2:11172011-11178168	0	+	11172011	11172011	8553170	2	34,432,	0,5725,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr2	11179760	11344585	chr2:11179760-11344585	3	-	11183436	11344136	0	33	3680,214,262,79,89,71,169,180,95,94,187,104,70,185,161,160,107,247,92,136,49,80,12,61,160,92,139,145,261,138,101,82,590,	0,12387,12690,14018,14495,15194,17419,17765,18730,18920,21196,21549,22291,27965,28526,31920,34596,35079,35560,35749,36397,37329,38694,39205,41437,42322,44561,47493,55941,69900,106778,107894,164235,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr2	11181651	11344585	chr2:11181651-11344585	1	-	11183436	11211828	789624	32	1789,214,262,79,89,71,169,180,95,94,187,104,70,185,161,160,107,247,92,136,49,84,69,160,92,139,145,261,138,101,82,590,	0,10496,10799,12127,12604,13303,15528,15874,16839,17029,19305,19658,20400,26074,26635,30029,32705,33188,33669,33858,34506,35438,37306,39546,40431,42670,45602,54050,68009,104887,106003,162344,
#Partially deleted in new
chr2	11183330	11234670	chr2:11183330-11234670	1	-	11183436	11227392	789624	29	110,214,262,79,89,71,169,180,95,94,187,104,70,185,161,160,107,247,92,136,49,80,12,61,160,92,139,145,467,	0,8817,9120,10448,10925,11624,13849,14195,15160,15350,17626,17979,18721,24395,24956,28350,31026,31509,31990,32179,32827,33759,35124,35635,37867,38752,40991,43923,50873,
#Deleted in new
chr2	11192675	11195210	chr2:11192675-11195210	0	-	11192675	11192675	8553170	4	37,79,89,256,	0,1103,1580,2279,
#Deleted in new
chr2	11193909	11195116	chr2:11193909-11195116	0	-	11193909	11193909	8553170	2	435,162,	0,1045,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	11215359	11344141	chr2:11215359-11344141	0	-	11218445	11344136	789624	15	53,136,49,80,152,61,160,92,139,145,261,138,101,82,146,	0,150,798,1730,2955,3606,5838,6723,8962,11894,20342,34301,71179,72295,128636,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	11217775	11221340	chr2:11217775-11221340	0	-	11217775	11217775	8553170	3	691,61,143,	0,1190,3422,
#Partially deleted in new
chr2	11221326	11287737	chr2:11221326-11287737	0	-	11221326	11286604	789624	7	31,92,139,145,138,101,83,	0,756,2995,5927,28334,65212,66328,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	11233987	11234094	chr2:11233987-11234094	3	+	11233987	11233987	8553170	1	107,	0,
#Partially deleted in new
chr2	11235883	11348330	chr2:11235883-11348330	0	-	11235883	11235883	8553170	5	79,138,101,82,163,	0,13777,50655,51771,112284,
#Partially deleted in new
chr2	11308024	11308941	chr2:11308024-11308941	7	+	11308024	11308024	16724991	1	917,	0,
#Deleted in new
chr2	11351626	11352118	chr2:11351626-11352118	7	+	11351626	11351626	16724991	1	492,	0,
#Partially deleted in new
chr2	11357514	11365636	chr2:11357514-11365636	3	-	11357514	11357514	8553170	2	522,539,	0,7583,
#Partially deleted in new
chr2	11393980	11403077	chr2:11393980-11403077	3	+	11393980	11393980	789624	3	191,86,1053,	0,6391,8044,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	11399001	11402108	chr2:11399001-11402108	1	+	11399001	11399001	8553170	4	217,103,86,84,	0,670,1370,3023,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	11407296	11423809	chr2:11407296-11423809	3	+	11407296	11407296	8553170	4	67,96,126,1543,	0,13874,14213,14970,
#Partially deleted in new
chr2	11444374	11466177	chr2:11444374-11466177	1	-	11446476	11458292	789624	8	2149,148,115,156,217,55,71,406,	0,3252,5637,7276,9207,12804,13906,21397,
#Partially deleted in new
chr2	11444374	11466149	chr2:11444374-11466149	3	-	11446476	11465879	789624	7	2149,148,115,156,217,55,378,	0,3252,5637,7276,9207,12804,21397,
#Partially deleted in new
chr2	11444374	11466146	chr2:11444374-11466146	0	-	11453693	11465879	789624	7	2149,148,115,156,141,55,375,	0,3252,5637,7276,9207,12804,21397,
#Partially deleted in new
chr2	11444374	11466156	chr2:11444374-11466156	0	-	11458306	11465879	789624	8	2149,148,115,156,217,55,71,385,	0,3252,5637,7276,9207,12804,13906,21397,
#Partially deleted in new
chr2	11444374	11466177	chr2:11444374-11466177	1	-	11446476	11453736	789624	9	2149,148,115,156,217,133,55,71,406,	0,3252,5637,7276,9207,10967,12804,13906,21397,
#Partially deleted in new
chr2	11444374	11466177	chr2:11444374-11466177	1	-	11446476	11453736	789624	6	2149,148,115,156,217,406,	0,3252,5637,7276,9207,21397,
#Partially deleted in new
chr2	11445299	11465879	chr2:11445299-11465879	0	-	11458306	11465879	789624	9	1224,148,115,156,217,133,55,71,108,	0,2327,4712,6351,8282,10042,11879,12981,20472,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	11446196	11451696	chr2:11446196-11451696	0	-	11446196	11446196	8553170	3	327,148,495,	0,1430,5005,
#Partially deleted in new
chr2	11446476	11466153	chr2:11446476-11466153	0	-	11455469	11465879	789624	8	47,148,115,156,217,133,55,382,	0,1150,3535,5174,7105,8865,10702,19295,
#Partially deleted in new
chr2	11447755	11466171	chr2:11447755-11466171	0	-	11453789	11465879	789624	5	19,115,156,217,400,	0,2256,3895,5826,18016,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	11451349	11466103	chr2:11451349-11466103	0	-	11451349	11451349	8553170	4	457,217,55,332,	0,2232,5829,14422,
#Partially deleted in new
chr2	11457010	11466158	chr2:11457010-11466158	0	-	11457010	11457010	8553170	2	223,387,	0,8761,
#Partially deleted in new
chr2	11482340	11562544	chr2:11482340-11562544	0	+	11556614	11562544	789624	3	41,315,82,	0,74116,80122,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	11517396	11517503	chr2:11517396-11517503	7	+	11517396	11517396	16724991	1	107,	0,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr2	11534115	11642788	chr2:11534115-11642788	3	+	11556614	11640454	789624	33	139,318,120,177,183,135,129,114,144,186,351,129,129,198,181,196,137,340,116,200,90,632,103,159,143,162,205,175,219,136,201,139,2498,	0,22338,28347,32364,42237,44181,46588,51045,51646,54630,58660,61135,61995,63665,64564,66684,68290,76572,78379,80975,82515,84172,86789,91038,92846,95832,97793,98773,100015,101154,103600,104555,106175,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	11539842	11588243	chr2:11539842-11588243	1	+	11556614	11587452	789624	10	266,318,120,177,183,135,129,114,144,862,	0,16611,22620,26637,36510,38454,40861,45318,45919,47539,
#Deleted in new
chr2	11540604	11540677	chr2:11540604-11540677	3	-	11540604	11540604	5263520	1	73,	0,
#Partially deleted in new
chr2	11542689	11581265	chr2:11542689-11581265	1	+	11566532	11581023	789624	6	138,120,177,183,135,562,	0,19773,23790,33663,35607,38014,
#Partially deleted in new
chr2	11542724	11592146	chr2:11542724-11592146	1	+	11556614	11591424	789624	11	93,315,120,177,183,135,129,114,144,186,751,	0,13732,19738,23755,33628,35572,37979,42436,43037,46021,48671,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr2	11556352	11642786	chr2:11556352-11642786	1	+	11556614	11640454	789624	32	419,120,177,183,135,129,114,144,186,351,129,129,198,181,196,137,340,116,200,90,632,103,159,143,162,205,175,219,136,201,139,2496,	0,6110,10127,20000,21944,24351,28808,29409,32393,36423,38898,39758,41428,42327,44447,46053,54335,56142,58738,60278,61935,64552,68801,70609,73595,75556,76536,77778,78917,81363,82318,83938,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	11556617	11563141	chr2:11556617-11563141	0	+	11556617	11556617	8553170	2	154,679,	0,5845,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	11561193	11561306	chr2:11561193-11561306	3	+	11561193	11561193	8553170	1	113,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	11561660	11561779	chr2:11561660-11561779	3	-	11561660	11561660	8553170	1	119,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	11561660	11561779	chr2:11561660-11561779	7	-	11561660	11561660	16724991	1	119,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	11584772	11585047	chr2:11584772-11585047	3	+	11584772	11584772	8553170	1	275,	0,
#Partially deleted in new
chr2	11588255	11610742	chr2:11588255-11610742	0	+	11588684	11610742	789624	9	676,351,129,129,198,181,196,137,55,	0,4520,6995,7855,9525,10424,12544,14150,22432,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	11612258	11642788	chr2:11612258-11642788	1	+	11612494	11640454	789624	16	118,116,200,90,632,103,159,143,162,205,175,219,136,201,139,2498,	0,236,2832,4372,6029,8646,12895,14703,17689,19650,20630,21872,23011,25457,26412,28032,
#Partially deleted in new
chr2	11612342	11618300	chr2:11612342-11618300	0	+	11612342	11612342	8553170	4	268,200,90,13,	0,2748,4288,5945,
#Partially deleted in new
chr2	11658177	11670164	chr2:11658177-11670164	3	-	11658478	11670129	789624	4	545,91,274,659,	0,1865,3789,11328,
#Deleted in new
chr2	11665368	11665969	chr2:11665368-11665969	7	-	11665368	11665368	16724991	1	601,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	11673963	11676925	chr2:11673963-11676925	3	-	11673963	11673963	8553170	2	524,72,	0,2890,
#Partially deleted in new
chr2	11677594	11824887	chr2:11677594-11824887	1	+	11677647	11824791	789624	22	134,57,201,96,308,126,108,127,307,94,191,94,70,93,80,127,149,87,153,115,104,256,	0,36161,87938,90168,93777,96025,98491,101924,104606,106234,107291,109479,110792,114319,117813,125312,126828,127475,137493,141889,142816,147037,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	11721618	11724222	chr2:11721618-11724222	3	-	11721618	11721618	8553170	2	894,711,	0,1893,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr2	11724333	11827405	chr2:11724333-11827405	1	+	11741419	11824791	789624	22	206,80,201,96,308,126,108,127,307,94,191,94,70,93,80,127,149,87,153,115,104,2774,	0,17015,41199,43429,47038,49286,51752,55185,57867,59495,60552,62740,64053,67580,71074,78573,80089,80736,90754,95150,96077,100298,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr2	11724333	11827405	chr2:11724333-11827405	1	+	11741419	11824791	789624	21	206,80,201,96,308,126,127,307,94,191,94,70,93,80,127,149,87,153,115,104,2774,	0,17015,41199,43429,47038,49286,55185,57867,59495,60552,62740,64053,67580,71074,78573,80089,80736,90754,95150,96077,100298,
#Partially deleted in new
chr2	11724348	11765599	chr2:11724348-11765599	0	+	11724348	11724348	8553170	4	294,80,137,67,	0,17000,17666,41184,
#Partially deleted in new
chr2	11724349	11746130	chr2:11724349-11746130	0	+	11724349	11724349	8553170	3	293,80,224,	0,16999,21557,
#Partially deleted in new
chr2	11724349	11746130	chr2:11724349-11746130	0	+	11724349	11724349	8553170	3	293,80,170,	0,16999,21611,
#Partially deleted in new
chr2	11724351	11783945	chr2:11724351-11783945	1	+	11741419	11783926	789624	10	291,80,201,96,308,126,108,127,307,117,	0,16997,41181,43411,47020,49268,51734,55167,57849,59477,
#Partially deleted in new
chr2	11724351	11824863	chr2:11724351-11824863	0	+	11741419	11804502	789624	22	291,80,201,96,308,126,108,127,307,94,191,94,70,93,80,127,144,87,153,115,104,232,	0,16997,41181,43411,47020,49268,51734,55167,57849,59477,60534,62722,64035,67562,71056,78555,80076,80718,90736,95132,96059,100280,
#Partially deleted in new
chr2	11740996	11745301	chr2:11740996-11745301	3	-	11740996	11740996	8553170	3	306,120,135,	0,1040,4170,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr2	11746587	11827409	chr2:11746587-11827409	3	+	11765541	11824791	789624	20	84,201,96,308,126,127,307,94,191,94,70,93,80,127,149,87,153,115,104,2778,	0,18945,21175,24784,27032,32931,35613,37241,38298,40486,41799,45326,48820,56319,57835,58482,68500,72896,73823,78044,
#Partially deleted in new
chr2	11746633	11767858	chr2:11746633-11767858	0	+	11765541	11767858	789624	4	38,264,201,96,	0,16389,18899,21129,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	11746637	11765625	chr2:11746637-11765625	0	+	11765541	11765625	789624	4	34,264,86,93,	0,16385,17566,18895,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	11767443	11767525	chr2:11767443-11767525	3	+	11767443	11767443	5263520	1	82,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	11777206	11826530	chr2:11777206-11826530	0	+	11777206	11777206	8553170	16	315,127,307,94,191,94,70,93,80,127,149,87,153,115,104,1899,	0,2312,4994,6622,7679,9867,11180,14707,18201,25700,27216,27863,37881,42277,43204,47425,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	11782363	11784313	chr2:11782363-11784313	0	+	11782363	11782363	8553170	2	144,485,	0,1465,
#Partially deleted in new
chr2	11783868	11784849	chr2:11783868-11784849	0	+	11783868	11783868	8553170	2	54,138,	0,843,
#Partially deleted in new
chr2	11787046	11792349	chr2:11787046-11792349	0	+	11787046	11787046	8553170	3	121,70,436,	0,1340,4867,
#Partially deleted in new
chr2	11787129	11804519	chr2:11787129-11804519	0	+	11787129	11804519	789624	7	38,70,78,93,80,127,97,	0,1257,4578,4784,8278,15777,17293,
#Deleted in new
chr2	11804439	11805515	chr2:11804439-11805515	0	+	11804439	11804439	8553170	2	132,446,	0,630,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	11816152	11826513	chr2:11816152-11826513	0	+	11816152	11816152	8553170	3	3446,104,1882,	0,4258,8479,
#Partially deleted in new
chr2	11823079	11825070	chr2:11823079-11825070	0	+	11823079	11823079	8553170	2	96,439,	0,1552,
#Deleted in new
chr2	11836932	11836986	chr2:11836932-11836986	3	-	11836932	11836932	5263520	1	54,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	11848621	11866284	chr2:11848621-11866284	1	+	11848621	11848621	8553170	2	123,435,	0,17228,
#Partially deleted in new
chr2	11865884	12309959	chr2:11865884-12309959	0	+	11865884	11865884	8553170	5	31,97,118,97,99,	0,141862,300853,442803,443976,
#Partially deleted in new
chr2	12007115	12131585	chr2:12007115-12131585	1	+	12007115	12007115	789624	4	112,97,134,280,	0,631,99702,124190,
#Partially deleted in new
chr2	12007127	12578348	chr2:12007127-12578348	3	+	12007127	12007127	789624	6	100,97,118,97,239,1532,	0,619,159610,301560,551078,569689,
#Partially deleted in new
chr2	12007173	12083618	chr2:12007173-12083618	0	+	12007173	12007173	789624	3	54,97,170,	0,573,76275,
#Deleted in new
chr2	12030302	12030372	chr2:12030302-12030372	3	-	12030302	12030302	8553170	1	70,	0,
#Partially deleted in new
chr2	12106583	12131548	chr2:12106583-12131548	0	+	12106583	12106583	8553170	3	101,134,243,	0,234,24722,
#Deleted in new
chr2	12199129	12199201	chr2:12199129-12199201	3	+	12199129	12199129	5263520	1	72,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	12598986	12605145	chr2:12598986-12605145	3	+	12598986	12598986	8553170	4	123,185,38,53,	0,3461,4037,6106,
#Deleted in new
chr2	12715414	12716227	chr2:12715414-12716227	3	+	12715414	12715414	8553170	1	813,	0,
#Partially deleted in new
chr2	12716888	12742734	chr2:12716888-12742734	3	+	12718307	12740794	789624	3	1689,293,2409,	0,6371,23437,
#Deleted in new
chr2	12716909	12717750	chr2:12716909-12717750	0	+	12716909	12716909	8553170	2	101,499,	0,342,
#Partially deleted in new
chr2	12716934	12742734	chr2:12716934-12742734	1	+	12723397	12740794	789624	3	76,293,2409,	0,6325,23391,
#Partially deleted in new
chr2	12718237	12724825	chr2:12718237-12724825	1	+	12718307	12724824	789624	3	340,293,197,	0,5022,6391,
#Deleted in new
chr2	12737366	12737444	chr2:12737366-12737444	3	+	12737366	12737366	5263520	1	78,	0,
#Partially deleted in new
chr2	12966783	13007013	chr2:12966783-13007013	3	-	12966783	12966783	789624	6	1250,82,154,185,128,143,	0,14253,34804,35640,37040,40087,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	13000952	13331683	chr2:13000952-13331683	3	+	13000952	13000952	8553170	5	65,49,88,189,1849,	0,181054,269926,283878,328882,
#Deleted in new
chr2	13001663	13006997	chr2:13001663-13006997	1	-	13001663	13001663	8553170	4	78,185,171,127,	0,760,2117,5207,
#Deleted in new
chr2	13002636	13007013	chr2:13002636-13007013	1	-	13002636	13002636	8553170	3	311,128,143,	0,1187,4234,
#Deleted in new
chr2	13003230	13007000	chr2:13003230-13007000	0	-	13003230	13003230	8553170	2	721,130,	0,3640,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	13537672	13609168	chr2:13537672-13609168	3	+	13537672	13537672	8553170	2	342,113,	0,71383,
#Partially deleted in new
chr2	13723047	13758152	chr2:13723047-13758152	3	+	13723047	13723047	8553170	3	145,93,594,	0,3786,34511,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	14228873	14400958	chr2:14228873-14400958	1	-	14228873	14228873	789624	4	3191,61,135,116,	0,7016,88095,171969,
#Partially deleted in new
chr2	14274621	14274725	chr2:14274621-14274725	3	-	14274621	14274621	8553170	1	104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	14530940	14531223	chr2:14530940-14531223	3	+	14530940	14530940	8553170	1	283,	0,
#Partially deleted in new
chr2	14616427	14630192	chr2:14616427-14630192	0	+	14616427	14616427	8553170	2	58,206,	0,13559,
#Partially deleted in new
chr2	14616427	14630192	chr2:14616427-14630192	3	+	14616427	14616427	8553170	3	58,82,206,	0,12175,13559,
#Deleted in new
chr2	14632685	14640046	chr2:14632685-14640046	3	+	14633979	14634858	789624	2	252,6103,	0,1258,
#Deleted in new
chr2	14632699	14637227	chr2:14632699-14637227	1	+	14633979	14634858	789624	3	238,243,3284,	0,886,1244,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	14635090	14650814	chr2:14635090-14650814	0	+	14635090	14635090	8553170	2	554,1499,	0,14225,
#Partially deleted in new
chr2	14635495	14649641	chr2:14635495-14649641	0	+	14635495	14635495	8553170	6	149,109,116,62,138,103,	0,6476,10608,10908,13820,14043,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	14886646	14907664	chr2:14886646-14907664	3	-	14886646	14886646	8553170	3	108,267,92,	0,3882,20926,
#Partially deleted in new
chr2	15166908	15561330	chr2:15166908-15561330	3	-	15167047	15561304	789624	52	415,129,139,140,196,90,203,219,335,251,111,230,138,77,121,114,168,90,158,114,114,113,230,103,123,63,134,174,186,154,84,137,105,79,141,152,126,258,194,64,129,69,139,99,134,134,44,48,78,37,55,143,	0,12079,19833,23355,51864,65513,67636,71559,108575,109942,120164,125628,141307,142262,160841,161290,163689,185083,186644,189394,199671,207699,212693,216306,227318,229504,235259,248637,250618,257406,260802,294292,294778,300420,300755,301473,306313,307158,308778,311317,321985,337236,344303,367634,369509,372314,384584,386517,387152,389874,391671,394279,
#Partially deleted in new
chr2	15166913	15238686	chr2:15166913-15238686	0	-	15190399	15238686	789624	7	410,129,139,140,90,203,219,	0,12074,19828,23350,65508,67631,71554,
#Partially deleted in new
chr2	15166915	15190403	chr2:15166915-15190403	0	-	15167047	15190403	789624	3	408,139,140,	0,19826,23348,
#Partially deleted in new
chr2	15166915	15424394	chr2:15166915-15424394	0	-	15167047	15424394	789624	28	408,129,139,140,196,90,203,219,335,251,111,230,138,77,121,114,168,90,158,114,114,113,230,103,123,63,134,80,	0,12072,19826,23348,51857,65506,67629,71552,108568,109935,120157,125621,141300,142255,160834,161283,163682,185076,186637,189387,199664,207692,212686,216299,227311,229497,235252,257399,
#Partially deleted in new
chr2	15166916	15180378	chr2:15166916-15180378	0	-	15166916	15166916	8553170	2	407,1391,	0,12071,
#Partially deleted in new
chr2	15177948	15190397	chr2:15177948-15190397	0	-	15178145	15190397	789624	4	209,129,139,134,	0,1039,8793,12315,
#Partially deleted in new
chr2	15374607	15424392	chr2:15374607-15424392	0	-	15374607	15424392	789624	7	113,230,103,123,63,134,78,	0,4994,8607,19619,21805,27560,49707,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	15393638	15417581	chr2:15393638-15417581	0	-	15393663	15417581	789624	6	89,123,63,134,174,55,	0,588,2774,8529,21907,23888,
#Deleted in new
chr2	15397434	15397782	chr2:15397434-15397782	7	-	15397434	15397434	16724991	1	348,	0,
#Partially deleted in new
chr2	15478244	15511303	chr2:15478244-15511303	0	-	15483356	15511303	789624	5	45,107,129,69,92,	0,5017,10649,25900,32967,
#Partially deleted in new
chr2	15591177	15631111	chr2:15591177-15631111	3	+	15591933	15630906	0	27	109,296,52,64,30,97,48,84,84,77,73,77,115,139,61,99,90,189,52,147,92,73,73,43,96,121,336,	0,476,3967,4312,5556,6197,8491,11370,12014,12636,13259,14772,14972,15997,22046,26066,27003,29030,29887,32258,35876,37267,37460,37619,38424,38812,39598,
#Partially deleted in new
chr2	15591482	15595177	chr2:15591482-15595177	0	+	15591933	15595177	789624	2	467,33,	0,3662,
#Partially deleted in new
chr2	15591620	15631109	chr2:15591620-15631109	1	+	15591933	15630906	0	26	329,52,64,30,97,48,84,84,77,73,77,115,139,61,99,90,189,52,147,92,73,73,43,96,121,334,	0,3524,3869,5113,5754,8048,10927,11571,12193,12816,14329,14529,15554,21603,25623,26560,28587,29444,31815,35433,36824,37017,37176,37981,38369,39155,
#Partially deleted in new
chr2	15591850	15631100	chr2:15591850-15631100	1	+	15591933	15630906	789624	22	99,48,84,84,77,73,77,115,139,61,99,90,189,52,147,92,73,73,43,96,121,325,	0,7818,10697,11341,11963,12586,14099,14299,15324,21373,25393,26330,28357,29214,31585,35203,36594,36787,36946,37751,38139,38925,
#Partially deleted in new
chr2	15599152	15631109	chr2:15599152-15631109	1	+	15599152	15630906	789624	22	16,48,84,84,77,73,77,115,139,61,99,90,189,52,147,92,73,73,43,96,121,334,	0,516,3395,4039,4661,5284,6797,6997,8022,14071,18091,19028,21055,21912,24283,27901,29292,29485,29644,30449,30837,31623,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	15617304	15621387	chr2:15617304-15621387	0	+	15617304	15617304	8553170	4	38,90,189,323,	0,876,2903,3760,
#Partially deleted in new
chr2	15621091	15628736	chr2:15621091-15628736	0	+	15621091	15621091	8553170	4	25,147,92,292,	0,2344,5962,7353,
#Partially deleted in new
chr2	15623532	15627557	chr2:15623532-15627557	0	+	15623532	15623532	8553170	2	50,504,	0,3521,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	15668683	15680484	chr2:15668683-15680484	3	-	15668683	15668683	8553170	3	261,93,214,	0,403,11587,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	15700400	15744339	chr2:15700400-15744339	0	+	15700400	15700400	8553170	4	135,147,35,114,	0,828,43088,43825,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	15700530	15715631	chr2:15700530-15715631	0	+	15700530	15700530	8553170	4	5,147,101,219,	0,698,7815,14882,
#Partially deleted in new
chr2	15801746	15810877	chr2:15801746-15810877	3	-	15801746	15801746	8553170	2	344,143,	0,8988,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	15864934	15865051	chr2:15864934-15865051	3	+	15864934	15864934	8553170	1	117,	0,
#Partially deleted in new
chr2	15869938	15870243	chr2:15869938-15870243	7	+	15869938	15869938	16724991	1	305,	0,
#Partially deleted in new
chr2	15903668	15903772	chr2:15903668-15903772	3	+	15903668	15903668	8553170	1	104,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	15920398	15936017	chr2:15920398-15936017	3	+	15920398	15920398	789624	3	665,130,244,	0,1169,15375,
#Partially deleted in new
chr2	15921036	15941248	chr2:15921036-15941248	3	-	15921036	15921036	8553170	3	86,170,275,	0,984,19937,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	15936264	15941582	chr2:15936264-15941582	1	-	15936264	15936264	789624	4	912,226,124,51,	0,2235,4709,5267,
#Deleted in new
chr2	15939897	15941723	chr2:15939897-15941723	1	-	15939897	15939897	5263520	3	454,124,192,	0,1076,1634,
#Deleted in new
chr2	15940120	15941238	chr2:15940120-15941238	0	-	15940120	15940120	8553170	2	231,265,	0,853,
#Deleted in new
chr2	15940184	15942249	chr2:15940184-15942249	0	-	15940184	15940184	8553170	3	167,124,98,	0,789,1967,
#Partially deleted in new
chr2	15940563	15947007	chr2:15940563-15947007	3	+	15942064	15946097	0	3	180,907,1515,	0,1384,4929,
#Partially deleted in new
chr2	15940565	15947007	chr2:15940565-15947007	1	+	15940586	15946097	789624	2	178,1515,	0,4927,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	15950688	15950981	chr2:15950688-15950981	3	-	15950688	15950688	8553170	1	293,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	16050426	16085801	chr2:16050426-16085801	3	+	16050426	16050426	789624	4	251,139,193,513,	0,22877,30471,34862,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	16073397	16081117	chr2:16073397-16081117	0	+	16073397	16073397	8553170	3	45,207,220,	0,769,7500,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	16085221	16105841	chr2:16085221-16105841	3	-	16085221	16085221	8553170	4	262,104,129,147,	0,12137,20193,20473,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	16096425	16105662	chr2:16096425-16105662	1	-	16096425	16096425	8553170	3	501,104,248,	0,933,8989,
#Deleted in new
chr2	16149250	16149394	chr2:16149250-16149394	7	+	16149250	16149250	16724991	1	144,	0,
#Deleted in new
chr2	16199202	16199295	chr2:16199202-16199295	3	+	16199202	16199202	8553170	1	93,	0,
#Partially deleted in new
chr2	16202429	16204226	chr2:16202429-16204226	3	+	16202429	16202429	8553170	3	26,85,526,	0,83,1271,
#Partially deleted in new
chr2	16224046	16333978	chr2:16224046-16333978	3	+	16224046	16224046	8553170	4	165,124,676,745,	0,3977,4544,109187,
#Partially deleted in new
chr2	16227026	16228194	chr2:16227026-16228194	3	-	16227026	16227026	8553170	2	279,136,	0,1032,
#Partially deleted in new
chr2	16228302	16251306	chr2:16228302-16251306	1	+	16228302	16228302	8553170	4	79,235,225,783,	0,729,11086,22221,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	16228323	16299108	chr2:16228323-16299108	0	+	16228323	16228323	8553170	3	58,235,268,	0,708,70517,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	16228331	16285624	chr2:16228331-16285624	1	+	16228331	16228331	8553170	4	50,235,83,864,	0,700,50195,56429,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	16294444	16302290	chr2:16294444-16302290	3	-	16294444	16294444	8553170	6	61,59,120,99,150,231,	0,617,3528,4499,7326,7615,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	16316323	16319566	chr2:16316323-16319566	3	-	16316323	16316323	8553170	2	569,171,	0,3072,
#Partially deleted in new
chr2	16354255	16432702	chr2:16354255-16432702	0	+	16354255	16354255	8553170	3	45,74,198,	0,37997,78249,
#Partially deleted in new
chr2	16355184	16432702	chr2:16355184-16432702	3	+	16355184	16355184	8553170	4	83,74,77,198,	0,37068,76546,77320,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	16523175	16529387	chr2:16523175-16529387	0	+	16523175	16523175	8553170	3	314,183,49,	0,1679,6163,
#Partially deleted in new
chr2	16523189	16527809	chr2:16523189-16527809	0	+	16523189	16523189	8553170	2	300,145,	0,4475,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	16523191	16555563	chr2:16523191-16555563	3	+	16523191	16523191	8553170	7	298,345,100,39,113,84,317,	0,1501,6147,15190,23308,29468,32055,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	16541689	16545695	chr2:16541689-16545695	7	-	16541689	16541689	16724991	2	1450,2552,	0,1454,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	16541689	16545695	chr2:16541689-16545695	0	-	16541689	16541689	8553170	1	4006,	0,
#Partially deleted in new
chr2	16549458	16665834	chr2:16549458-16665834	3	-	16552935	16588119	789624	12	3541,71,127,80,117,78,137,106,122,80,156,55,	0,5610,10001,11531,11702,11997,12546,14530,16187,38591,74405,116321,
#Partially deleted in new
chr2	16552935	16665828	chr2:16552935-16665828	1	-	16552935	16588119	789624	13	64,71,127,80,117,78,137,106,122,80,199,156,49,	0,2133,6524,8054,8225,8520,9069,11053,12710,35114,70003,70928,112844,
#Deleted in new
chr2	16560656	16561482	chr2:16560656-16561482	0	-	16560656	16560656	8553170	3	413,117,27,	0,504,799,
#Partially deleted in new
chr2	16564004	16666086	chr2:16564004-16666086	0	-	16564004	16588119	789624	5	90,122,80,156,96,	0,1641,24045,59859,101986,
#Partially deleted in new
chr2	16564023	16666331	chr2:16564023-16666331	0	-	16564023	16588119	789624	6	71,122,80,156,42,108,	0,1622,24026,59840,61704,102200,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	16728123	16767409	chr2:16728123-16767409	3	+	16728123	16728123	8553170	3	56,114,394,	0,36888,38892,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	16728123	16767555	chr2:16728123-16767555	0	+	16728123	16728123	8553170	2	56,540,	0,38892,
#Partially deleted in new
chr2	16853819	16855284	chr2:16853819-16855284	7	-	16853819	16853819	16724991	2	589,361,	0,1104,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	16970033	16974497	chr2:16970033-16974497	3	+	16970033	16970033	8553170	3	44,103,54,	0,1396,4410,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	17122840	17123140	chr2:17122840-17123140	3	-	17122840	17122840	8553170	1	300,	0,
#Partially deleted in new
chr2	17284291	17284895	chr2:17284291-17284895	7	+	17284291	17284291	16724991	1	604,	0,
#Partially deleted in new
chr2	17385090	17386417	chr2:17385090-17386417	7	+	17385090	17385090	16724991	1	1327,	0,
#Partially deleted in new
chr2	17510583	17518439	chr2:17510583-17518439	3	-	17510803	17518415	789624	3	372,81,3271,	0,3428,4585,
#Partially deleted in new
chr2	17539125	17655528	chr2:17539125-17655528	3	+	17592074	17655394	789624	4	277,167,216,332,	0,52944,110284,116071,
#Partially deleted in new
chr2	17539966	17649602	chr2:17539966-17649602	0	+	17592074	17649602	789624	3	216,167,193,	0,52103,109443,
#Partially deleted in new
chr2	17540652	17656439	chr2:17540652-17656439	1	+	17592074	17655394	789624	4	266,167,216,1243,	0,51417,108757,114544,
#Partially deleted in new
chr2	17540695	17649560	chr2:17540695-17649560	0	+	17592074	17649560	789624	4	223,21,167,151,	0,5307,51374,108714,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	17540706	17567707	chr2:17540706-17567707	0	+	17540706	17540706	8553170	3	212,21,328,	0,5296,26673,
#Partially deleted in new
chr2	17541159	17657018	chr2:17541159-17657018	1	+	17592074	17655394	789624	4	520,167,216,1822,	0,50910,108250,114037,
#Partially deleted in new
chr2	17663811	17753830	chr2:17663811-17753830	1	-	17665498	17745946	789624	27	1802,98,153,106,126,146,138,171,81,136,161,115,205,179,165,89,147,99,120,102,81,62,137,106,118,125,205,	0,2608,6611,15047,19826,31340,32477,36396,38017,39345,43407,44827,51049,52274,52929,53276,54265,57128,57330,61445,62577,67266,67929,74409,77800,82015,89814,
#Partially deleted in new
chr2	17663811	17753803	chr2:17663811-17753803	1	-	17665498	17745946	789624	28	1802,98,153,106,126,146,138,171,81,136,161,115,205,179,165,89,147,99,120,102,81,62,137,106,118,125,87,178,	0,2608,6611,15047,19826,31340,32477,36396,38017,39345,43407,44827,51049,52274,52929,53276,54265,57128,57330,61445,62577,67266,67929,74409,77800,82015,89166,89814,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	17665125	17682016	chr2:17665125-17682016	0	-	17665125	17665125	8553170	4	488,98,153,3158,	0,1294,5297,13733,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr2	17665446	17800195	chr2:17665446-17800195	3	-	17665498	17745946	789624	30	167,98,153,106,126,146,138,171,81,136,161,115,205,179,165,89,147,99,120,102,81,62,137,106,118,125,107,75,122,92,	0,973,4976,13412,18191,29705,30842,34761,36382,37710,41772,43192,49414,50639,51294,51641,52630,55493,55695,59810,60942,65631,66294,72774,76165,80380,122368,133704,134192,134657,
#Partially deleted in new
chr2	17707227	17714877	chr2:17707227-17714877	0	-	17713528	17714877	789624	4	152,115,196,17,	0,1411,6157,7633,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	17716749	17746412	chr2:17716749-17746412	0	-	17716749	17745946	789624	12	156,89,147,99,120,102,81,62,137,106,118,586,	0,338,1327,4190,4392,8507,9639,14328,14991,21471,24862,29077,
#Partially deleted in new
chr2	17741621	17753829	chr2:17741621-17753829	0	-	17741621	17745946	789624	4	108,125,63,204,	0,4205,11380,12004,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	17741678	17800242	chr2:17741678-17800242	0	-	17741678	17745946	789624	5	51,125,107,122,139,	0,4148,46136,57960,58425,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	17753857	17788941	chr2:17753857-17788941	3	+	17759943	17781939	0	14	110,176,187,177,111,74,92,151,37,81,131,62,144,8321,	0,6071,7538,11039,12721,14880,17338,18776,19238,19361,20413,24144,26120,26763,
#Deleted in new
chr2	17753894	17755758	chr2:17753894-17755758	0	+	17753894	17753894	8553170	1	1864,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	17754146	17785365	chr2:17754146-17785365	1	+	17759943	17781939	0	14	199,176,187,177,111,74,92,151,37,81,131,62,144,4745,	0,5782,7249,10750,12432,14591,17049,18487,18949,19072,20124,23855,25831,26474,
#Partially deleted in new
chr2	17754146	17764927	chr2:17754146-17764927	0	+	17759943	17764927	789624	4	199,176,187,31,	0,5782,7249,10750,
#Partially deleted in new
chr2	17754159	17761514	chr2:17754159-17761514	0	+	17759943	17761514	789624	3	186,193,119,	0,5752,7236,
#Partially deleted in new
chr2	17761395	17765144	chr2:17761395-17765144	0	+	17761395	17761395	8553170	2	187,248,	0,3501,
#Partially deleted in new
chr2	17771075	17780770	chr2:17771075-17780770	0	+	17771075	17771075	8553170	9	23,92,151,37,81,131,62,144,150,	0,120,1558,2020,2143,3195,6926,8902,9545,
#Deleted in new
chr2	17772647	17774472	chr2:17772647-17774472	0	+	17772647	17774405	789624	4	137,37,81,202,	0,448,571,1623,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	17797564	17800158	chr2:17797564-17800158	0	-	17797564	17797564	8553170	4	334,75,86,55,	0,1586,2074,2539,
#Deleted in new
chr2	17816495	17817101	chr2:17816495-17817101	3	+	17816518	17817100	789624	1	606,	0,
#Partially deleted in new
chr2	17877846	17932954	chr2:17877846-17932954	3	+	17931008	17932484	789624	3	200,192,2005,	0,39833,53103,
#Partially deleted in new
chr2	17878666	17919635	chr2:17878666-17919635	0	+	17878666	17878666	8553170	3	140,192,228,	0,39013,40741,
#Partially deleted in new
chr2	17878677	17932961	chr2:17878677-17932961	1	+	17931008	17932484	789624	3	129,192,2012,	0,39002,52272,
#Partially deleted in new
chr2	17878693	18361616	chr2:17878693-18361616	0	+	17878693	17878693	8553170	5	113,192,119,111,50,	0,38986,291696,439956,482873,
#Partially deleted in new
chr2	17879382	17931231	chr2:17879382-17931231	0	+	17931008	17931231	789624	3	79,192,282,	0,38297,51567,
#Deleted in new
chr2	18040605	18040733	chr2:18040605-18040733	3	-	18040605	18040605	8553170	1	128,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	18547385	18548204	chr2:18547385-18548204	3	-	18547385	18547385	8553170	1	819,	0,
#Partially deleted in new
chr2	18554722	18560680	chr2:18554722-18560680	3	-	18555190	18560572	789624	2	1086,501,	0,5457,
#Partially deleted in new
chr2	18555121	18560679	chr2:18555121-18560679	0	-	18555121	18555121	8553170	2	687,50,	0,5508,
#Partially deleted in new
chr2	18555544	18589564	chr2:18555544-18589564	0	-	18555544	18589468	789624	9	264,185,123,130,168,465,144,90,126,	0,20639,21228,27323,28543,28969,30703,31958,33894,
#Partially deleted in new
chr2	18555544	18589562	chr2:18555544-18589562	3	-	18555783	18589468	789624	11	264,275,185,123,130,168,465,138,180,90,124,	0,8300,20639,21228,27323,28543,28969,30709,31449,31958,33894,
#Partially deleted in new
chr2	18562871	18589569	chr2:18562871-18589569	1	-	18563795	18589468	789624	9	1248,185,123,130,168,465,138,90,131,	0,13312,13901,19996,21216,21642,23382,24631,26567,
#Partially deleted in new
chr2	18562931	18589572	chr2:18562931-18589572	2	-	18584557	18589468	789624	10	1188,185,123,130,168,382,10,144,90,134,	0,13252,13841,19936,21156,21582,22037,23316,24571,26507,
#Partially deleted in new
chr2	18563231	18589546	chr2:18563231-18589546	1	-	18563795	18589468	789624	10	888,185,123,130,168,465,138,180,90,108,	0,12952,13541,19636,20856,21282,23022,23762,24271,26207,
#Partially deleted in new
chr2	18563677	18583911	chr2:18563677-18583911	0	-	18563795	18583911	789624	5	442,185,123,130,34,	0,12506,13095,19190,20200,
#Deleted in new
chr2	18583366	18583468	chr2:18583366-18583468	3	-	18583366	18583366	8553170	1	102,	0,
#Deleted in new
chr2	18583743	18587038	chr2:18583743-18587038	0	-	18583743	18583743	8553170	3	512,465,791,	0,770,2504,
#Deleted in new
chr2	18584850	18589536	chr2:18584850-18589536	0	-	18584850	18589468	789624	5	128,138,231,90,98,	0,1403,2092,2652,4588,
#Deleted in new
chr2	18584945	18589564	chr2:18584945-18589564	0	-	18584945	18584945	8553170	4	207,138,90,126,	0,1308,2557,4493,
#Partially deleted in new
chr2	18784806	18787752	chr2:18784806-18787752	3	+	18784806	18784806	8553170	2	109,259,	0,2687,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	18986450	19026971	chr2:18986450-19026971	0	-	18986450	18986450	789624	4	1418,46,154,331,	0,8868,35883,40190,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	18986473	19348067	chr2:18986473-19348067	3	-	18986473	18986473	8553170	8	1395,46,154,65,99,136,105,80,	0,8845,35860,40167,98453,138778,360170,361514,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	19022448	19306054	chr2:19022448-19306054	0	-	19022448	19022448	8553170	5	39,65,99,136,232,	0,4192,62478,102803,283374,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	19026659	19306037	chr2:19026659-19306037	0	-	19026659	19026659	8553170	5	46,57,99,136,215,	0,4664,58267,98592,279163,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	19044865	19346748	chr2:19044865-19346748	1	-	19044865	19044865	8553170	5	146,85,154,136,105,	0,18217,21115,80386,301778,
#Deleted in new
chr2	19348428	19348505	chr2:19348428-19348505	3	+	19348428	19348428	5263520	1	77,	0,
#Partially deleted in new
chr2	19351484	19358653	chr2:19351484-19358653	3	-	19352274	19353805	789624	3	926,697,313,	0,1656,6856,
#Partially deleted in new
chr2	19352011	19356912	chr2:19352011-19356912	0	-	19352011	19352011	8553170	2	399,3772,	0,1129,
#Deleted in new
chr2	19357705	19358623	chr2:19357705-19358623	0	-	19357705	19357705	8553170	2	241,340,	0,578,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	19458219	19468961	chr2:19458219-19468961	3	-	19458219	19458219	8553170	2	1101,608,	0,10134,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	19711714	19717576	chr2:19711714-19717576	3	+	19711714	19711714	8553170	2	128,315,	0,5547,
#Deleted in new
chr2	19826248	19826575	chr2:19826248-19826575	7	+	19826248	19826248	16724991	1	327,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	19868859	19877393	chr2:19868859-19877393	0	+	19868859	19868859	8553170	5	93,118,204,233,1591,	0,636,3533,4272,6943,
#Partially deleted in new
chr2	19868873	19885047	chr2:19868873-19885047	3	+	19868873	19868873	789624	10	79,118,145,204,233,141,965,121,91,898,	0,622,1528,3519,4258,6929,10362,13741,14684,15276,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	19868890	19877535	chr2:19868890-19877535	1	+	19868890	19868890	8553170	6	62,118,122,204,233,1733,	0,605,1534,3502,4241,6912,
#Partially deleted in new
chr2	19868890	19872530	chr2:19868890-19872530	0	+	19868890	19868890	8553170	5	62,82,118,122,138,	0,184,605,1534,3502,
#Partially deleted in new
chr2	19872392	19884336	chr2:19872392-19884336	0	+	19872392	19872392	8553170	6	204,233,141,134,91,187,	0,739,3410,6718,11165,11757,
#Deleted in new
chr2	19896642	19901956	chr2:19896642-19901956	1	-	19897116	19901854	789624	2	484,251,	0,5063,
#Deleted in new
chr2	19896752	19901986	chr2:19896752-19901986	3	-	19896986	19901854	789624	3	374,167,281,	0,1116,4953,
#Deleted in new
chr2	19897025	19898477	chr2:19897025-19898477	0	-	19897025	19897025	8553170	2	101,609,	0,843,
#Deleted in new
chr2	19897868	19901641	chr2:19897868-19901641	0	-	19897868	19901121	789624	2	167,612,	0,3161,
#Deleted in new
chr2	19902024	19902569	chr2:19902024-19902569	3	+	19902024	19902024	8553170	1	545,	0,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr2	19910259	19990122	chr2:19910259-19990122	3	-	19913557	19990015	789624	27	3449,241,157,141,165,111,133,147,204,137,81,211,110,54,70,145,61,186,126,146,166,134,129,93,72,118,131,	0,3777,20136,21009,22023,23141,25211,25959,27483,28005,31499,35526,36201,37904,41155,43574,50294,56464,59220,63303,64208,65270,68491,70431,72203,78905,79732,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr2	19910259	19990131	chr2:19910259-19990131	1	-	19913557	19990015	789624	28	3449,241,157,141,165,111,133,147,204,137,81,211,110,54,70,145,61,33,186,126,146,166,134,129,93,72,118,140,	0,3777,20136,21009,22023,23141,25211,25959,27483,28005,31499,35526,36201,37904,41155,43574,50294,52035,56464,59220,63303,64208,65270,68491,70431,72203,78905,79732,
#Partially deleted in new
chr2	19913241	19975636	chr2:19913241-19975636	0	-	19953957	19975636	789624	18	467,157,141,133,147,204,137,81,211,110,54,70,145,186,126,146,166,107,	0,17154,18027,22229,22977,24501,25023,28517,32544,33219,34922,38173,40592,53482,56238,60321,61226,62288,
#Partially deleted in new
chr2	19913557	19990048	chr2:19913557-19990048	0	-	19933473	19990015	789624	28	151,241,157,141,65,111,137,147,204,137,81,211,110,54,70,145,61,33,186,126,146,166,134,129,93,72,118,57,	0,479,16838,17711,18825,19843,21909,22661,24185,24707,28201,32228,32903,34606,37857,40276,46996,48737,53166,55922,60005,60910,61972,65193,67133,68905,75607,76434,
#Partially deleted in new
chr2	19935031	19953871	chr2:19935031-19953871	0	-	19935434	19953871	789624	10	572,147,204,137,81,211,110,54,70,38,	0,1187,2711,3233,6727,10754,11429,13132,16383,18802,
#Partially deleted in new
chr2	19948171	19951921	chr2:19948171-19951921	0	-	19948171	19948171	8553170	2	46,507,	0,3243,
#Partially deleted in new
chr2	19990216	20004210	chr2:19990216-20004210	3	+	19990216	19990216	789624	3	278,72,191,	0,8989,13803,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	19992110	20012694	chr2:19992110-20012694	3	-	19993110	20012631	789624	8	1056,111,126,126,126,126,567,286,	0,2188,5023,8330,9844,11050,13633,20298,
#Partially deleted in new
chr2	19993036	20012665	chr2:19993036-20012665	1	-	19993110	20012631	789624	7	130,111,126,126,126,567,257,	0,1262,4097,7404,8918,12707,19372,
#Partially deleted in new
chr2	19994336	19997853	chr2:19994336-19997853	0	-	19994336	19994336	8553170	2	73,720,	0,2797,
#Partially deleted in new
chr2	20032649	20052028	chr2:20032649-20052028	3	-	20033204	20051520	789624	7	630,99,96,123,77,121,619,	0,1667,2317,4666,4888,8241,18760,
#Deleted in new
chr2	20033168	20035243	chr2:20033168-20035243	0	-	20033168	20033168	8553170	3	111,99,277,	0,1148,1798,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	20063855	20106829	chr2:20063855-20106829	3	-	20063855	20063855	8553170	2	656,90,	0,42884,
#Deleted in new
chr2	20155617	20156057	chr2:20155617-20156057	7	-	20155617	20155617	16724991	1	440,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	20175345	20175639	chr2:20175345-20175639	3	+	20175345	20175345	8553170	1	294,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	20175804	20175909	chr2:20175804-20175909	3	+	20175804	20175804	8553170	1	105,	0,
#Partially deleted in new
chr2	20200796	20225112	chr2:20200796-20225112	1	-	20202765	20224867	0	5	2139,136,479,82,311,	0,2290,3016,4546,24005,
#Partially deleted in new
chr2	20200798	20225433	chr2:20200798-20225433	3	-	20202765	20224867	0	6	2137,136,479,82,285,172,	0,2288,3014,4544,24003,24463,
#Partially deleted in new
chr2	20201485	20225096	chr2:20201485-20225096	1	-	20202269	20224867	789624	4	816,330,82,295,	0,2476,3857,23316,
#Partially deleted in new
chr2	20203817	20224280	chr2:20203817-20224280	0	-	20203817	20224280	789624	3	474,82,90,	0,1525,20373,
#Partially deleted in new
chr2	20204001	20223388	chr2:20204001-20223388	0	-	20204001	20204001	8553170	3	290,82,186,	0,1341,19201,
#Partially deleted in new
chr2	20204151	20225094	chr2:20204151-20225094	0	-	20223257	20224867	789624	4	140,82,76,293,	0,1191,19051,20650,
#Deleted in new
chr2	20239891	20241046	chr2:20239891-20241046	7	-	20239891	20239891	16724991	1	1155,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	20246325	20246387	chr2:20246325-20246387	3	-	20246325	20246325	8553170	1	62,	0,
#Partially deleted in new
chr2	20248690	20327383	chr2:20248690-20327383	1	-	20251584	20327360	789624	20	3026,193,122,126,138,129,130,268,237,285,144,139,143,126,94,271,170,188,109,74,	0,5131,6172,6525,7342,9552,11646,14502,29892,34256,34652,41961,45685,48862,59287,59623,62803,63545,69846,78619,
#Partially deleted in new
chr2	20248691	20327386	chr2:20248691-20327386	1	-	20251584	20312415	789624	20	3025,193,122,126,138,129,130,268,285,144,139,143,126,94,271,170,188,109,125,77,	0,5130,6171,6524,7341,9551,11645,14501,34255,34651,41960,45684,48861,59286,59622,62802,63544,69845,77569,78618,
#Partially deleted in new
chr2	20248691	20350850	chr2:20248691-20350850	1	-	20251584	20312415	789624	20	3025,193,122,126,138,129,130,268,237,285,144,139,143,126,94,271,170,188,69,254,	0,5130,6171,6524,7341,9551,11645,14501,29891,34255,34651,41960,45684,48861,59286,59622,62802,63544,78618,101905,
#Partially deleted in new
chr2	20249863	20312256	chr2:20249863-20312256	0	-	20251584	20312256	789624	17	1853,193,122,126,138,129,130,268,285,144,139,143,126,94,271,170,21,	0,3958,4999,5352,6169,8379,10473,13329,33083,33479,40788,44512,47689,58114,58450,61630,62372,
#Partially deleted in new
chr2	20251309	20350702	chr2:20251309-20350702	3	-	20251584	20327360	789624	21	407,193,122,126,138,129,130,268,237,285,144,139,143,126,94,271,170,188,109,69,106,	0,2512,3553,3906,4723,6933,9027,11883,27273,31637,32033,39342,43066,46243,56668,57004,60184,60926,67227,76000,99287,
#Partially deleted in new
chr2	20307980	20352222	chr2:20307980-20352222	0	-	20307980	20327360	789624	7	91,271,170,188,109,69,57,	0,333,3513,4255,10556,19329,44185,
#Partially deleted in new
chr2	20308413	20350834	chr2:20308413-20350834	0	-	20308413	20308413	8553170	5	171,188,109,69,25,	0,3822,10123,18896,42396,
#Partially deleted in new
chr2	20308489	20350621	chr2:20308489-20350621	0	-	20312351	20327360	789624	5	95,170,188,69,25,	0,3004,3746,18820,42107,
#Partially deleted in new
chr2	20311639	20352234	chr2:20311639-20352234	0	-	20326328	20327360	789624	6	24,188,109,125,69,69,	0,596,6897,14621,15670,40526,
#Partially deleted in new
chr2	20312298	20350301	chr2:20312298-20350301	0	-	20326328	20327360	789624	5	125,109,125,69,97,	0,6238,13962,15011,37906,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	20318592	20350702	chr2:20318592-20350702	0	-	20318592	20327360	789624	5	53,69,221,97,106,	0,8717,13124,14374,32004,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	20386385	20396588	chr2:20386385-20396588	7	+	20386385	20386385	16724991	6	705,60,141,116,117,224,	0,1012,5890,6218,7654,9979,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	20401626	20401724	chr2:20401626-20401724	7	-	20401626	20401626	16724991	1	98,	0,
#Partially deleted in new
chr2	20447073	20449445	chr2:20447073-20449445	3	+	20447465	20448056	0	1	2372,	0,
#Partially deleted in new
chr2	20451041	20452947	chr2:20451041-20452947	3	+	20451041	20451041	8553170	2	99,209,	0,1697,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	20480843	20480955	chr2:20480843-20480955	3	+	20480843	20480843	8553170	1	112,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	20499570	20501311	chr2:20499570-20501311	3	-	20499570	20499570	8553170	2	540,146,	0,1595,
#Deleted in new
chr2	20529466	20529976	chr2:20529466-20529976	7	-	20529466	20529466	16724991	1	510,	0,
#Partially deleted in new
chr2	20560447	20651082	chr2:20560447-20651082	0	-	20560447	20638440	789624	6	68,136,161,217,208,51,	0,63448,64284,77988,80525,90584,
#Deleted in new
chr2	20586247	20586686	chr2:20586247-20586686	3	-	20586247	20586247	8553170	1	439,	0,
#Partially deleted in new
chr2	20590774	20592548	chr2:20590774-20592548	3	-	20590774	20590774	789624	2	473,127,	0,1647,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	20592616	20624773	chr2:20592616-20624773	0	-	20598219	20624773	789624	4	178,58,136,42,	0,5591,31279,32115,
#Partially deleted in new
chr2	20606279	20606654	chr2:20606279-20606654	7	-	20606279	20606279	16724991	1	375,	0,
#Partially deleted in new
chr2	20617821	20651089	chr2:20617821-20651089	3	-	20618986	20651063	789624	7	1424,136,161,217,208,166,58,	0,6074,6910,20614,23151,27518,33210,
#Partially deleted in new
chr2	20622178	20638515	chr2:20622178-20638515	0	-	20622297	20638515	789624	4	141,136,161,80,	0,1717,2553,16257,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	20622187	20624892	chr2:20622187-20624892	0	-	20623858	20624892	789624	2	1844,161,	0,2544,
#Partially deleted in new
chr2	20634715	20651078	chr2:20634715-20651078	1	-	20638416	20651063	789624	4	3937,208,166,47,	0,6257,10624,16316,
#Partially deleted in new
chr2	20640024	20651084	chr2:20640024-20651084	1	-	20640778	20651063	789624	3	1156,166,53,	0,5315,11007,
#Partially deleted in new
chr2	20641134	20651063	chr2:20641134-20651063	1	-	20641134	20651063	789624	2	46,32,	0,9897,
#Deleted in new
chr2	20666663	20679245	chr2:20666663-20679245	3	+	20667239	20671425	789624	2	967,8782,	0,3800,
#Deleted in new
chr2	20678253	20678932	chr2:20678253-20678932	3	-	20678253	20678253	8553170	1	679,	0,
#Partially deleted in new
chr2	20684013	20823130	chr2:20684013-20823130	1	-	20686902	20801463	789624	6	3081,83,235,170,174,94,	0,17556,55957,90796,117278,139023,
#Partially deleted in new
chr2	20684013	20823130	chr2:20684013-20823130	1	-	20701619	20801463	789624	6	3081,83,170,144,156,94,	0,17556,90796,106241,117296,139023,
#Partially deleted in new
chr2	20684013	20823130	chr2:20684013-20823130	1	-	20686902	20774887	789624	6	3081,83,235,170,144,94,	0,17556,55957,90796,106241,139023,
#Partially deleted in new
chr2	20684013	20823130	chr2:20684013-20823130	1	-	20686902	20774887	789624	5	3081,83,235,170,94,	0,17556,55957,90796,139023,
#Partially deleted in new
chr2	20684027	20823104	chr2:20684027-20823104	1	-	20684895	20774887	789624	8	896,111,188,83,235,170,144,68,	0,1519,2879,17542,55943,90782,106227,139009,
#Partially deleted in new
chr2	20684043	20823114	chr2:20684043-20823114	1	-	20684895	20801463	789624	9	880,111,188,83,235,170,144,156,78,	0,1503,2863,17526,55927,90766,106211,117266,138993,
#Partially deleted in new
chr2	20684411	20739991	chr2:20684411-20739991	0	-	20684411	20684411	8553170	4	464,1548,83,21,	0,1135,17158,55559,
#Partially deleted in new
chr2	20685053	20823114	chr2:20685053-20823114	3	-	20686902	20801463	789624	7	2041,83,235,170,144,156,78,	0,16516,54917,89756,105201,116256,137983,
#Partially deleted in new
chr2	20686624	20823101	chr2:20686624-20823101	1	-	20686902	20801463	789624	6	470,83,235,170,156,65,	0,14945,53346,88185,114685,136412,
#Partially deleted in new
chr2	20701574	20823101	chr2:20701574-20823101	0	-	20701574	20774887	789624	4	78,235,170,65,	0,38396,73235,121462,
#Partially deleted in new
chr2	20740051	20823122	chr2:20740051-20823122	0	-	20740051	20801463	789624	4	154,170,156,86,	0,34758,61258,82985,
#Partially deleted in new
chr2	20774857	20823089	chr2:20774857-20823089	0	-	20774857	20801463	789624	4	122,144,174,53,	0,15397,26434,48179,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	20788888	20823110	chr2:20788888-20823110	1	-	20789167	20801463	789624	4	452,144,156,74,	0,1366,12421,34148,
#Deleted in new
chr2	20859770	20861661	chr2:20859770-20861661	3	+	20859770	20859770	8553170	2	187,1311,	0,580,
#Deleted in new
chr2	20999312	21000917	chr2:20999312-21000917	3	-	20999312	20999312	8553170	1	1605,	0,
#Partially deleted in new
chr2	21001428	21044073	chr2:21001428-21044073	3	-	21001729	21043945	789624	29	1906,184,115,7572,374,146,188,176,211,122,183,212,168,192,177,238,212,147,118,228,220,86,125,156,154,146,116,39,210,	0,2840,3132,3651,11731,13019,13644,13941,15010,17563,18294,21402,22096,23504,25359,26399,26898,28210,28469,30925,31870,33387,34155,35671,36529,39509,40932,42084,42435,
#Deleted in new
chr2	21023495	21024170	chr2:21023495-21024170	3	+	21023495	21023495	8553170	1	675,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	21024169	21043962	chr2:21024169-21043962	1	-	21024793	21043945	789624	17	707,160,177,238,212,147,118,228,220,86,125,156,154,146,116,39,99,	0,795,2618,3658,4157,5469,5728,8184,9129,10646,11414,12930,13788,16768,18191,19343,19694,
#Partially deleted in new
chr2	21123916	21143272	chr2:21123916-21143272	3	+	21137467	21143272	789624	4	130,111,86,5808,	0,3684,10845,13548,
#Deleted in new
chr2	21137467	21143272	chr2:21137467-21143272	1	+	21137467	21143272	789624	1	5805,	0,
#Deleted in new
chr2	21198517	21198896	chr2:21198517-21198896	7	-	21198517	21198517	16724991	1	379,	0,
#Partially deleted in new
chr2	21221184	21264086	chr2:21221184-21264086	1	+	21221184	21221184	8553170	2	110,394,	0,42508,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	21317659	21561313	chr2:21317659-21561313	1	+	21317659	21317659	8553170	5	154,92,154,73,21,	0,2743,78361,242212,243633,
#Partially deleted in new
chr2	21317702	21403174	chr2:21317702-21403174	1	+	21317702	21317702	8553170	7	111,92,271,154,110,43,280,	0,2700,38874,78318,78552,79139,85192,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	21362291	21364025	chr2:21362291-21364025	7	-	21362291	21362291	16724991	2	165,198,	0,1536,
#Partially deleted in new
chr2	21396075	21403174	chr2:21396075-21403174	0	+	21396075	21396075	8553170	2	99,280,	0,6819,
#Partially deleted in new
chr2	21396582	21403174	chr2:21396582-21403174	2	+	21396582	21396582	8553170	2	302,280,	0,6312,
#Partially deleted in new
chr2	21607464	21637197	chr2:21607464-21637197	3	-	21607464	21607464	8553170	3	446,102,929,	0,28578,28804,
#Partially deleted in new
chr2	21630547	21636309	chr2:21630547-21636309	1	-	21630547	21630547	8553170	3	396,102,41,	0,5495,5721,
#Partially deleted in new
chr2	21638183	21649502	chr2:21638183-21649502	3	-	21638183	21638183	8553170	3	355,215,51,	0,9354,11268,
#Partially deleted in new
chr2	21638430	21649563	chr2:21638430-21649563	0	-	21638430	21638430	8553170	3	108,215,225,	0,9107,10908,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	21687433	21710623	chr2:21687433-21710623	3	-	21687433	21687433	789624	3	1891,178,29,	0,22715,23161,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	21922992	21923288	chr2:21922992-21923288	3	+	21922992	21922992	8553170	1	296,	0,
#Partially deleted in new
chr2	21933335	22531105	chr2:21933335-22531105	3	-	21933335	21933335	8553170	5	212,128,96,130,70,	0,1631,38405,277529,597700,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	21942177	21965551	chr2:21942177-21965551	0	-	21942177	21942177	8553170	2	2815,195,	0,23179,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	21942192	21965680	chr2:21942192-21965680	1	-	21942192	21942192	8553170	3	2800,61,324,	0,22360,23164,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	22188335	22190313	chr2:22188335-22190313	7	+	22188335	22188335	16724991	1	1978,	0,
#Deleted in new
chr2	22317052	22317244	chr2:22317052-22317244	7	+	22317052	22317052	16724991	1	192,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	22338885	22339003	chr2:22338885-22339003	7	-	22338885	22338885	16724991	1	118,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	22377593	22482004	chr2:22377593-22482004	3	+	22377593	22377593	8553170	4	118,95,63,293,	0,51278,100803,104118,
#Deleted in new
chr2	22536478	22538288	chr2:22536478-22538288	3	+	22536478	22536478	789624	3	47,184,209,	0,526,1601,
#Partially deleted in new
chr2	22861551	22861884	chr2:22861551-22861884	3	+	22861551	22861551	8553170	1	333,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	23018124	23090837	chr2:23018124-23090837	1	-	23018124	23018124	8553170	7	131,67,109,129,71,119,91,	0,855,2159,7696,9742,12417,72622,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	23027108	23030421	chr2:23027108-23030421	1	-	23027108	23027108	8553170	3	301,132,100,	0,697,3213,
#Partially deleted in new
chr2	23030602	23199056	chr2:23030602-23199056	3	-	23030602	23030602	8553170	4	58,98,102,248,	0,47217,60144,168206,
#Deleted in new
chr2	23330663	23332044	chr2:23330663-23332044	3	-	23330663	23330663	8553170	4	207,79,181,58,	0,294,1050,1323,
#Partially deleted in new
chr2	23347653	23351864	chr2:23347653-23351864	3	+	23347653	23347653	8553170	2	120,772,	0,3439,
#Partially deleted in new
chr2	23357515	23360376	chr2:23357515-23360376	3	-	23357515	23357515	8553170	2	410,123,	0,2738,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	23375228	23381299	chr2:23375228-23381299	3	-	23375228	23375228	8553170	4	232,87,143,79,	0,369,1555,5992,
#Partially deleted in new
chr2	23385216	23708606	chr2:23385216-23708606	3	+	23562196	23706664	789624	14	564,108,330,142,513,139,203,260,199,183,181,194,145,2126,	0,90343,176935,253922,257121,299182,306457,308052,310406,310734,311116,317969,318502,321264,
#Partially deleted in new
chr2	23507042	23524344	chr2:23507042-23524344	3	-	23507042	23507042	8553170	2	190,394,	0,16908,
#Partially deleted in new
chr2	23532584	23644285	chr2:23532584-23644285	0	+	23532584	23532584	8553170	4	36,330,142,1948,	0,29567,106554,109753,
#Deleted in new
chr2	23616498	23617987	chr2:23616498-23617987	3	-	23616498	23616498	8553170	1	1489,	0,
#Partially deleted in new
chr2	23642391	23697932	chr2:23642391-23697932	0	+	23642391	23696517	789624	7	459,139,203,260,199,183,1600,	0,42007,49282,50877,53231,53559,53941,
#Partially deleted in new
chr2	23667207	23685453	chr2:23667207-23685453	3	-	23667207	23667207	8553170	7	2054,160,98,53,98,81,162,	0,2134,2976,4744,5108,5518,18084,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	23688784	23708611	chr2:23688784-23708611	0	+	23688784	23688784	8553170	8	3092,260,199,183,181,194,145,2131,	0,4484,6838,7166,7548,14401,14934,17696,
#Partially deleted in new
chr2	23748663	23927114	chr2:23748663-23927114	3	-	23752045	23926770	789624	28	3424,129,128,684,138,123,160,197,136,186,187,136,312,91,160,89,175,116,112,99,76,117,109,103,154,50,152,560,	0,5515,5983,8754,13545,16842,34205,37363,39848,49474,61652,71083,74594,80185,85255,108751,114717,116145,119171,120999,127165,131975,136101,137063,139168,139686,147155,177891,
#Partially deleted in new
chr2	23748670	23819855	chr2:23748670-23819855	0	-	23752045	23819855	789624	12	3417,129,128,684,138,123,160,182,136,186,187,109,	0,5508,5976,8747,13538,16835,34198,37371,39841,49467,61645,71076,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr2	23751802	23832602	chr2:23751802-23832602	0	-	23751802	23751802	8553170	19	285,129,128,684,138,123,160,197,136,186,169,58,188,187,136,312,63,91,395,	0,2376,2844,5615,10406,13703,31066,34224,36709,46335,48022,54368,57186,58513,67944,71455,75995,77046,80405,
#Deleted in new
chr2	23754183	23755092	chr2:23754183-23755092	0	-	23754183	23754183	8553170	2	124,446,	0,463,
#Partially deleted in new
chr2	23785754	23788363	chr2:23785754-23788363	0	-	23785754	23785754	8553170	2	469,162,	0,2447,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	23806173	23811470	chr2:23806173-23811470	0	-	23806173	23806173	8553170	3	55,187,279,	0,4142,5018,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	23823510	23832611	chr2:23823510-23832611	0	-	23823510	23832249	789624	3	59,91,404,	0,5338,8697,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	23856008	23867887	chr2:23856008-23867887	0	-	23856008	23856008	8553170	5	434,89,175,116,53,	0,1406,7372,8800,11826,
#Partially deleted in new
chr2	23869669	23927065	chr2:23869669-23927065	0	-	23869669	23926770	789624	10	92,76,117,42,109,103,154,50,152,511,	0,6159,10969,13924,15095,16057,18162,18680,26149,56885,
#Deleted in new
chr2	23872267	23873014	chr2:23872267-23873014	7	-	23872267	23872267	16724991	1	747,	0,
#Deleted in new
chr2	23900692	23901149	chr2:23900692-23901149	7	+	23900692	23900692	16724991	1	457,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	23927284	24000820	chr2:23927284-24000820	0	+	23927284	23927284	8553170	8	331,55,117,139,107,138,159,1149,	0,31016,41634,43991,49684,55611,57388,72387,
#Partially deleted in new
chr2	23927311	24000203	chr2:23927311-24000203	3	+	23958314	23999867	789624	8	304,123,55,139,107,138,159,532,	0,12228,30989,43964,49657,55584,57361,72360,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	23940418	24004909	chr2:23940418-24004909	1	+	23958314	23999867	789624	7	230,55,139,107,138,159,5238,	0,17882,30857,36550,42477,44254,59253,
#Deleted in new
chr2	23943845	23944351	chr2:23943845-23944351	7	+	23943845	23943845	16724991	1	506,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	23971363	23977320	chr2:23971363-23977320	0	+	23971363	23971363	8553170	2	51,352,	0,5605,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	23996794	23997085	chr2:23996794-23997085	3	-	23996794	23996794	8553170	1	291,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	24010080	24026775	chr2:24010080-24026775	3	+	24010096	24025456	789624	14	112,126,125,124,79,131,91,122,84,81,110,144,177,1344,	0,3204,6075,6764,7205,7377,11567,11768,12352,12741,13049,13502,14014,15351,
#Partially deleted in new
chr2	24010080	24024293	chr2:24010080-24024293	1	+	24010096	24024275	789624	13	112,126,125,124,79,131,91,122,84,81,110,144,199,	0,3204,6075,6764,7205,7377,11567,11768,12352,12741,13049,13502,14014,
#Partially deleted in new
chr2	24012898	24018733	chr2:24012898-24018733	0	+	24012898	24012898	8553170	6	151,126,125,124,131,499,	0,386,3257,3946,4559,5336,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	24017489	24026775	chr2:24017489-24026775	0	+	24017489	24017489	8553170	8	99,109,122,84,81,597,177,1344,	0,4140,4359,4943,5332,5640,6605,7942,
#Partially deleted in new
chr2	24024152	24063321	chr2:24024152-24063321	0	+	24024152	24033182	789624	5	119,91,48,113,303,	0,9014,29749,36661,38866,
#Partially deleted in new
chr2	24029339	24047353	chr2:24029339-24047353	3	-	24030932	24039494	789624	4	1823,118,1836,40,	0,3489,8337,17974,
#Partially deleted in new
chr2	24029346	24047361	chr2:24029346-24047361	1	-	24031111	24039494	789624	3	1816,1836,48,	0,8330,17967,
#Partially deleted in new
chr2	24038972	24049575	chr2:24038972-24049575	0	-	24038972	24039494	789624	2	540,22,	0,10581,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	24045834	24045938	chr2:24045834-24045938	3	+	24045834	24045834	8553170	1	104,	0,
#Partially deleted in new
chr2	24049700	24063681	chr2:24049700-24063681	1	+	24049849	24063063	0	4	186,48,113,663,	0,4201,11113,13318,
#Partially deleted in new
chr2	24049713	24063681	chr2:24049713-24063681	3	+	24049849	24063192	0	4	173,48,113,618,	0,4188,11100,13350,
#Partially deleted in new
chr2	24049730	24063681	chr2:24049730-24063681	0	+	24049849	24054192	789624	6	156,48,89,68,113,663,	0,4171,4373,4742,11083,13288,
#Partially deleted in new
chr2	24049751	24063656	chr2:24049751-24063656	0	+	24049751	24049751	8553170	4	135,715,113,638,	0,4150,11062,13267,
#Partially deleted in new
chr2	24049770	24063671	chr2:24049770-24063671	1	+	24060815	24063192	789624	5	116,48,68,113,608,	0,4131,4702,11043,13293,
#Partially deleted in new
chr2	24053910	24063681	chr2:24053910-24063681	0	+	24053910	24054192	789624	4	39,89,113,618,	0,193,6903,9153,
#Partially deleted in new
chr2	24067583	24076443	chr2:24067583-24076443	3	-	24067761	24076229	0	4	268,139,119,244,	0,737,6492,8616,
#Partially deleted in new
chr2	24073648	24076373	chr2:24073648-24076373	0	-	24073648	24073648	8553170	2	546,174,	0,2551,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	24076525	24097468	chr2:24076525-24097468	0	+	24076525	24076525	8553170	3	90,77,2328,	0,4353,18615,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	24076857	24097452	chr2:24076857-24097452	0	+	24076857	24076857	8553170	4	112,80,119,2305,	0,4018,10408,18290,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	24076881	24169638	chr2:24076881-24169638	1	+	24139420	24167669	789624	11	88,80,89,69,81,88,157,108,138,57,283,	0,3994,18259,58237,62488,69866,70048,84624,87316,90745,92474,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	24076927	24146801	chr2:24076927-24146801	0	+	24076927	24076927	8553170	6	42,80,69,81,255,54,	0,3948,58191,62442,65564,69820,
#Partially deleted in new
chr2	24077432	24085215	chr2:24077432-24085215	3	-	24077578	24084326	0	6	329,197,213,268,143,485,	0,2011,3386,5452,6756,7298,
#Partially deleted in new
chr2	24077434	24085181	chr2:24077434-24085181	1	-	24077578	24084326	0	5	327,197,213,268,993,	0,2009,3384,5450,6754,
#Partially deleted in new
chr2	24077633	24084326	chr2:24077633-24084326	1	-	24077633	24084326	0	4	128,213,268,138,	0,3185,5251,6555,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	24078904	24080955	chr2:24078904-24080955	0	+	24078904	24078904	8553170	2	277,80,	0,1971,
#Partially deleted in new
chr2	24079501	24084511	chr2:24079501-24084511	0	-	24079501	24079501	8553170	4	139,213,152,323,	0,1317,3499,4687,
#Partially deleted in new
chr2	24080745	24084311	chr2:24080745-24084311	0	-	24080771	24084311	789624	3	286,268,123,	0,2139,3443,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	24084748	24085861	chr2:24084748-24085861	0	-	24084748	24084748	8553170	2	112,205,	0,908,
#Partially deleted in new
chr2	24115370	24123477	chr2:24115370-24123477	3	-	24115582	24122535	789624	5	241,106,138,129,360,	0,4206,5792,7048,7747,
#Partially deleted in new
chr2	24115396	24123319	chr2:24115396-24123319	0	-	24115396	24115396	8553170	4	215,106,138,202,	0,4180,5766,7721,
#Deleted in new
chr2	24122506	24123464	chr2:24122506-24123464	0	-	24122506	24122535	789624	3	41,82,347,	0,245,611,
#Partially deleted in new
chr2	24123479	24169637	chr2:24123479-24169637	3	+	24124361	24167669	789624	11	54,131,69,192,81,88,157,108,138,57,282,	0,850,11639,14429,15890,23268,23450,38026,40718,44147,45876,
#Partially deleted in new
chr2	24124162	24169496	chr2:24124162-24169496	0	+	24124361	24164254	789624	5	298,69,138,57,141,	0,10956,40035,43464,45193,
#Partially deleted in new
chr2	24124361	24167669	chr2:24124361-24167669	1	+	24124361	24167669	789624	9	99,69,192,81,88,157,108,138,43,	0,10757,13547,15008,22386,22568,37144,39836,43265,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	24124365	24190436	chr2:24124365-24190436	3	+	24124454	24172665	789624	14	95,69,81,88,157,138,831,168,107,214,69,88,151,25,	0,10753,15004,22382,22564,39832,48200,50185,51101,51299,53436,58919,59129,66046,
#Partially deleted in new
chr2	24146937	24169640	chr2:24146937-24169640	0	+	24146937	24165412	789624	5	149,138,128,57,285,	0,17260,18435,20689,22418,
#Partially deleted in new
chr2	24164255	24169637	chr2:24164255-24169637	0	+	24164255	24169392	789624	2	80,282,	0,5100,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	24165883	24174783	chr2:24165883-24174783	3	-	24165883	24165883	8553170	4	156,122,238,276,	0,558,1936,8624,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	24169948	24175005	chr2:24169948-24175005	1	-	24169948	24169948	8553170	2	176,498,	0,4559,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	24172797	24176101	chr2:24172797-24176101	0	+	24172797	24172797	8553170	5	599,168,107,214,119,	0,1753,2669,2867,3185,
#Partially deleted in new
chr2	24175068	24190512	chr2:24175068-24190512	0	+	24175480	24179269	789624	7	106,107,69,187,88,151,101,	0,398,2733,4042,8216,8426,15343,
#Partially deleted in new
chr2	24175102	24191698	chr2:24175102-24191698	3	+	24175480	24190631	789624	6	72,107,69,88,151,1287,	0,364,2699,8182,8392,15309,
#Partially deleted in new
chr2	24175484	24190527	chr2:24175484-24190527	0	+	24175484	24190527	789624	6	89,69,117,88,151,116,	0,2317,3626,7800,8010,14927,
#Partially deleted in new
chr2	24183541	24200849	chr2:24183541-24200849	0	+	24183541	24200744	789624	3	104,142,270,	0,6870,17038,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	24199838	24201698	chr2:24199838-24201698	3	-	24199838	24199838	8553170	2	271,272,	0,1588,
#Partially deleted in new
chr2	24202863	24360714	chr2:24202863-24360714	3	-	24203625	24328082	0	40	920,174,84,83,122,216,168,99,184,107,122,192,97,122,46,167,65,206,145,182,98,176,137,81,140,88,141,150,263,86,138,64,140,97,204,164,64,93,64,411,	0,1381,2350,5373,6236,6954,7916,9786,13185,15043,18081,43265,43933,45765,45973,49481,51503,55024,58242,58697,67807,68902,72849,81899,83348,90824,92800,95801,97045,98290,99101,100935,105753,107420,107625,109348,110596,112268,125188,157440,
#Partially deleted in new
chr2	24202863	24360309	chr2:24202863-24360309	1	-	24203625	24328082	0	39	920,174,84,83,122,216,168,99,184,107,122,192,97,122,46,167,65,206,145,182,98,176,137,140,88,141,150,263,86,138,64,140,97,204,164,64,93,64,6,	0,1381,2350,5373,6236,6954,7916,9786,13185,15043,18081,43265,43933,45765,45973,49481,51503,55024,58242,58697,67807,68902,72849,83348,90824,92800,95801,97045,98290,99101,100935,105753,107420,107625,109348,110596,112268,125188,157440,
#Partially deleted in new
chr2	24202863	24205693	chr2:24202863-24205693	0	-	24202863	24202863	8553170	2	1555,480,	0,2350,
#Partially deleted in new
chr2	24202866	24328118	chr2:24202866-24328118	1	-	24203625	24328115	789624	39	917,174,84,83,122,216,168,99,184,107,122,192,97,122,46,167,65,206,145,182,98,176,137,140,88,141,150,263,86,138,64,140,97,204,164,64,93,49,15,	0,1378,2347,5370,6233,6951,7913,9783,13182,15040,18078,43262,43930,45762,45970,49478,51500,55021,58239,58694,67804,68899,72846,83345,90821,92797,95798,97042,98287,99098,100932,105750,107417,107622,109345,110593,112265,125185,125237,
#Partially deleted in new
chr2	24203281	24209948	chr2:24203281-24209948	0	-	24208283	24209948	789624	5	502,174,84,83,131,	0,963,1932,4955,6536,
#Partially deleted in new
chr2	24204362	24208316	chr2:24204362-24208316	0	-	24206246	24208316	789624	4	56,84,32,80,	0,851,1881,3874,
#Deleted in new
chr2	24205265	24210329	chr2:24205265-24210329	0	-	24205265	24205265	8553170	4	32,83,122,512,	0,2971,3834,4552,
#Partially deleted in new
chr2	24214380	24216294	chr2:24214380-24216294	1	+	24214380	24214380	8553170	2	45,195,	0,1719,
#Partially deleted in new
chr2	24214380	24221506	chr2:24214380-24221506	0	+	24214380	24214380	8553170	2	45,187,	0,6939,
#Partially deleted in new
chr2	24214380	24221516	chr2:24214380-24221516	3	+	24214380	24214380	8553170	3	45,190,197,	0,6392,6939,
#Partially deleted in new
chr2	24220318	24360508	chr2:24220318-24360508	1	-	24220893	24328082	0	30	748,192,97,122,46,167,65,206,145,182,98,176,137,81,140,88,141,150,263,86,138,64,140,97,204,164,64,93,64,205,	0,25810,26478,28310,28518,32026,34048,37569,40787,41242,50352,51447,55394,64444,65893,73369,75345,78346,79590,80835,81646,83480,88298,89965,90170,91893,93141,94813,107733,139985,
#Partially deleted in new
chr2	24238932	24248699	chr2:24238932-24248699	0	-	24242204	24248699	789624	4	3274,192,97,71,	0,7196,7864,9696,
#Deleted in new
chr2	24273613	24273741	chr2:24273613-24273741	3	-	24273613	24273613	8553170	1	128,	0,
#Partially deleted in new
chr2	24293260	24295711	chr2:24293260-24295711	0	-	24293260	24293260	8553170	2	515,48,	0,2403,
#Partially deleted in new
chr2	24310343	24360490	chr2:24310343-24360490	0	-	24310343	24315213	789624	9	37,204,164,64,93,67,22,64,187,	0,145,1868,3116,4788,11470,16316,17708,49960,
#Partially deleted in new
chr2	24311619	24360472	chr2:24311619-24360472	0	-	24311619	24311619	8553170	6	43,164,64,93,64,169,	0,592,1840,3512,16432,48684,
#Deleted in new
chr2	24330401	24330674	chr2:24330401-24330674	7	+	24330401	24330401	16724991	1	273,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	24334511	24335152	chr2:24334511-24335152	7	+	24334511	24334511	16724991	2	254,63,	0,578,
#Partially deleted in new
chr2	24491913	24644055	chr2:24491913-24644055	0	+	24491913	24491913	8553170	3	275,136,90,	0,72381,152052,
#Partially deleted in new
chr2	24491931	24770702	chr2:24491931-24770702	1	+	24658677	24768391	0	23	257,136,85,157,106,167,98,178,180,96,141,148,1321,181,118,169,315,102,403,175,184,90,2482,	0,72363,92544,152034,166729,173817,181434,191019,199549,201320,205726,213154,214636,218999,234657,236376,237569,247500,249852,260050,266041,270755,276289,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	24492022	24584484	chr2:24492022-24584484	0	+	24492022	24492022	8553170	5	166,185,41,136,9,	0,62366,63992,72272,92453,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr2	24492057	24770702	chr2:24492057-24770702	3	+	24658677	24768123	0	25	131,185,136,85,157,106,167,98,178,180,96,141,148,1321,181,118,169,315,102,403,175,184,90,57,2482,	0,62331,72237,92418,151908,166603,173691,181308,190893,199423,201194,205600,213028,214510,218873,234531,236250,237443,247374,249726,259924,265915,270629,276021,276163,
#Partially deleted in new
chr2	24564309	24768543	chr2:24564309-24768543	1	+	24683049	24768123	789624	22	121,85,157,106,98,178,180,96,141,148,1321,181,118,169,315,102,403,175,184,90,57,320,	0,20166,79656,94351,109056,118641,127171,128942,133348,140776,142258,146621,162279,163998,165191,175122,177474,187672,193663,198377,203769,203914,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	24564629	24564738	chr2:24564629-24564738	7	-	24564629	24564629	16724991	1	109,	0,
#Partially deleted in new
chr2	24584475	24659129	chr2:24584475-24659129	0	+	24584475	24584475	8553170	3	85,157,469,	0,59490,74185,
#Partially deleted in new
chr2	24584476	24770702	chr2:24584476-24770702	1	+	24658677	24768123	0	22	84,157,106,167,98,178,180,96,141,148,1321,181,118,169,315,102,403,175,184,90,57,2482,	0,59489,74184,81272,88889,98474,107004,108775,113181,120609,122091,126454,142112,143831,145024,154955,157307,167505,173496,178210,183602,183744,
#Partially deleted in new
chr2	24584476	24770702	chr2:24584476-24770702	1	+	24658677	24768391	0	21	84,157,106,167,98,178,180,96,141,148,1321,181,118,169,315,102,403,175,184,90,2482,	0,59489,74184,81272,88889,98474,107004,108775,113181,120609,122091,126454,142112,143831,145024,154955,157307,167505,173496,178210,183744,
#Partially deleted in new
chr2	24584540	24770702	chr2:24584540-24770702	1	+	24658677	24768391	0	21	20,157,106,167,98,178,180,96,141,148,1321,181,118,169,315,102,403,175,184,90,2479,	0,59425,74120,81208,88825,98410,106940,108711,113117,120545,122027,126390,142048,143767,144960,154891,157243,167441,173432,178146,183683,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	24676308	24676415	chr2:24676308-24676415	3	+	24676308	24676308	8553170	1	107,	0,
#Partially deleted in new
chr2	24707726	24711483	chr2:24707726-24711483	0	+	24707726	24707726	8553170	2	162,553,	0,3204,
#Deleted in new
chr2	24767770	24768388	chr2:24767770-24768388	0	+	24767770	24767770	8553170	2	365,168,	0,450,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	24789733	24793382	chr2:24789733-24793382	3	-	24790410	24793377	789624	2	848,257,	0,3392,
#Partially deleted in new
chr2	24790204	24793053	chr2:24790204-24793053	0	-	24790204	24790204	8553170	3	377,201,287,	0,2179,2562,
#Partially deleted in new
chr2	24790262	24791606	chr2:24790262-24791606	0	-	24790262	24790262	8553170	2	319,105,	0,1239,
#Partially deleted in new
chr2	24790265	24793074	chr2:24790265-24793074	0	-	24790265	24790265	8553170	2	316,308,	0,2501,
#Partially deleted in new
chr2	24790274	24793090	chr2:24790274-24793090	0	-	24790274	24790274	8553170	2	307,707,	0,2109,
#Deleted in new
chr2	24792433	24793075	chr2:24792433-24793075	0	-	24792433	24792433	8553170	2	151,390,	0,252,
#Partially deleted in new
chr2	24793135	24799794	chr2:24793135-24799794	0	+	24793135	24793135	8553170	4	29,196,114,120,	0,170,716,6539,
#Partially deleted in new
chr2	24793144	24822376	chr2:24793144-24822376	3	+	24793919	24817806	789624	8	357,114,170,118,260,172,172,3023,	0,707,6530,21231,22352,23501,24525,26209,
#Partially deleted in new
chr2	24793144	24822376	chr2:24793144-24822376	1	+	24793473	24817806	789624	7	357,170,118,260,172,172,3023,	0,6530,21231,22352,23501,24525,26209,
#Partially deleted in new
chr2	24793399	24816571	chr2:24793399-24816571	0	+	24793399	24793399	8553170	5	102,114,170,118,1075,	0,452,6275,20976,22097,
#Partially deleted in new
chr2	24793444	24814782	chr2:24793444-24814782	0	+	24793444	24793444	8553170	4	57,114,170,407,	0,407,6230,20931,
#Partially deleted in new
chr2	24793461	24822373	chr2:24793461-24822373	1	+	24793919	24817806	789624	8	59,114,170,118,260,172,172,3020,	0,390,6213,20914,22035,23184,24208,25892,
#Partially deleted in new
chr2	24793477	24817787	chr2:24793477-24817787	0	+	24793477	24793477	8553170	6	24,170,118,159,172,118,	0,6197,20898,22120,23168,24192,
#Deleted in new
chr2	24815624	24819650	chr2:24815624-24819650	0	+	24815624	24815624	8553170	4	132,59,172,297,	0,1134,2045,3729,
#Deleted in new
chr2	24815699	24819891	chr2:24815699-24819891	0	+	24815699	24815699	8553170	4	57,87,172,538,	0,1031,1970,3654,
#Partially deleted in new
chr2	24819168	24919839	chr2:24819168-24919839	3	-	24819931	24918987	789624	21	946,125,124,120,147,159,82,63,260,117,88,162,143,129,178,159,128,112,131,150,1527,	0,1555,2348,3342,4040,5209,6876,8377,8733,11540,12493,15316,15625,17748,19276,20704,22090,22387,23085,53401,99144,
#Partially deleted in new
chr2	24819171	24919186	chr2:24819171-24919186	1	-	24819931	24918987	789624	21	943,125,124,120,147,159,85,63,260,117,88,162,143,129,178,159,128,112,131,150,874,	0,1552,2345,3339,4037,5206,6873,8374,8730,11537,12490,15313,15622,17745,19273,20701,22087,22384,23082,53398,99141,
#Partially deleted in new
chr2	24819171	24841636	chr2:24819171-24841636	0	-	24819931	24841636	789624	19	943,125,124,120,147,159,82,63,122,117,88,162,143,129,178,66,159,128,81,	0,1552,2345,3339,4037,5206,6873,8374,8730,11537,12490,15313,15622,17745,19273,19675,20701,22087,22384,
#Deleted in new
chr2	24819368	24820796	chr2:24819368-24820796	0	-	24820107	24820796	789624	3	746,68,73,	0,1015,1355,
#Deleted in new
chr2	24820245	24823363	chr2:24820245-24823363	0	-	24820245	24820245	8553170	4	603,124,120,155,	0,1271,2265,2963,
#Deleted in new
chr2	24825609	24826717	chr2:24825609-24826717	3	+	24825609	24825609	8553170	1	1108,	0,
#Partially deleted in new
chr2	24826046	24831733	chr2:24826046-24831733	0	-	24826046	24831733	789624	5	83,63,260,117,72,	0,1499,1855,4662,5615,
#Partially deleted in new
chr2	24827562	24832185	chr2:24827562-24832185	0	-	24827562	24827562	8553170	5	46,260,117,88,60,	0,339,3146,4099,4563,
#Partially deleted in new
chr2	24834925	24840603	chr2:24834925-24840603	0	-	24834925	24834925	8553170	5	11,129,178,159,79,	0,1991,3519,4947,5599,
#Partially deleted in new
chr2	24836952	24872692	chr2:24836952-24872692	0	-	24836952	24872692	789624	7	93,178,159,128,112,101,123,	0,1492,2920,4306,4603,5301,35617,
#Partially deleted in new
chr2	24836981	24919839	chr2:24836981-24919839	0	-	24836981	24918987	789624	8	64,178,159,128,112,131,872,157,	0,1463,2891,4277,4574,5272,81331,82701,
#Deleted in new
chr2	24840006	24842592	chr2:24840006-24842592	0	-	24840006	24840006	8553170	4	25,128,112,339,	0,1252,1549,2247,
#Partially deleted in new
chr2	24841324	24878027	chr2:24841324-24878027	0	-	24841324	24877930	789624	5	62,112,131,150,106,	0,231,929,31245,36597,
#Deleted in new
chr2	24918651	24919512	chr2:24918651-24919512	0	-	24918651	24918987	789624	2	533,39,	0,822,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	24943635	24972094	chr2:24943635-24972094	3	-	24947615	24971904	0	7	4113,161,123,165,70,83,277,	0,7758,13407,14174,19769,23575,28182,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	24943635	24972094	chr2:24943635-24972094	1	-	24947742	24971904	0	6	4113,123,165,70,83,277,	0,13407,14174,19769,23575,28182,
#Partially deleted in new
chr2	24951509	24971616	chr2:24951509-24971616	0	-	24951509	24951509	8553170	6	45,123,165,70,83,61,	0,5533,6300,11895,15701,20046,
#Partially deleted in new
chr2	24957865	24971616	chr2:24957865-24971616	0	-	24957865	24957865	8553170	4	109,70,83,201,	0,5539,9345,13550,
#Partially deleted in new
chr2	24963114	24971859	chr2:24963114-24971859	0	-	24963114	24963114	8553170	3	360,83,42,	0,4096,8703,
#Deleted in new
chr2	24968957	24969224	chr2:24968957-24969224	7	-	24968957	24968957	16724991	1	267,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	24969387	24969477	chr2:24969387-24969477	3	-	24969387	24969387	8553170	1	90,	0,
#Deleted in new
chr2	24971389	24972822	chr2:24971389-24972822	0	+	24971389	24971389	8553170	2	263,197,	0,1236,
#Partially deleted in new
chr2	24971441	25035750	chr2:24971441-25035750	1	+	24971441	24971441	8553170	5	70,131,44,55,188,	0,29973,32625,63831,64121,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	24972125	25039694	chr2:24972125-25039694	1	+	24972125	24972125	789624	3	107,131,4422,	0,29289,63147,
#Partially deleted in new
chr2	24972125	25027517	chr2:24972125-25027517	0	+	24972125	24972125	8553170	4	107,131,126,207,	0,29289,31859,55185,
#Deleted in new
chr2	24972164	24972822	chr2:24972164-24972822	0	+	24972164	24972164	8553170	2	166,197,	0,461,
#Deleted in new
chr2	24972182	24972830	chr2:24972182-24972830	0	+	24972182	24972182	8553170	2	50,205,	0,443,
#Deleted in new
chr2	25008844	25008946	chr2:25008844-25008946	3	-	25008844	25008844	8553170	1	102,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr2	25042129	25147888	chr2:25042129-25147888	1	+	25042312	25145096	789624	19	190,77,128,151,122,150,135,79,136,162,112,52,173,76,162,132,68,128,2929,	0,49195,50873,61507,79543,86053,87845,88422,89238,89620,90773,91253,93337,94393,95211,96929,99236,101605,102830,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr2	25042129	25159137	chr2:25042129-25159137	3	+	25042312	25154340	789624	23	190,77,128,151,122,150,135,79,136,162,112,52,173,76,162,132,68,128,92,49,107,50,4903,	0,49195,50873,61507,79543,86053,87845,88422,89238,89620,90773,91253,93337,94393,95211,96929,99236,101605,102830,107564,109784,111582,112105,
#Partially deleted in new
chr2	25042462	25155374	chr2:25042462-25155374	1	+	25093023	25154340	789624	23	204,77,128,151,122,150,135,79,136,162,112,52,173,76,162,132,68,128,92,49,107,50,1140,	0,48862,50540,61174,79210,85720,87512,88089,88905,89287,90440,90920,93004,94060,94878,96596,98903,101272,102497,107231,109451,111249,111772,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	25058031	25058329	chr2:25058031-25058329	3	+	25058031	25058031	8553170	1	298,	0,
#Partially deleted in new
chr2	25079900	25081689	chr2:25079900-25081689	7	-	25079900	25079900	16724991	3	379,710,268,	0,719,1521,
#Partially deleted in new
chr2	25115987	25154565	chr2:25115987-25154565	1	+	25121753	25154340	789624	20	116,122,150,135,79,136,162,112,52,173,76,162,132,68,128,92,49,107,50,331,	0,5685,12195,13987,14564,15380,15762,16915,17395,19479,20535,21353,23071,25378,27747,28972,33706,35926,37724,38247,
#Partially deleted in new
chr2	25121672	25154361	chr2:25121672-25154361	0	+	25121672	25154340	789624	18	122,150,135,79,136,162,112,52,173,76,162,68,128,92,49,107,50,127,	0,6510,8302,8879,9695,10077,11230,11710,13794,14850,15668,19693,22062,23287,28021,30241,32039,32562,
#Partially deleted in new
chr2	25160852	25168690	chr2:25160852-25168690	1	-	25161080	25164772	0	4	900,152,50,193,	0,3788,4783,7645,
#Partially deleted in new
chr2	25160914	25168903	chr2:25160914-25168903	3	-	25161080	25164772	0	3	838,182,406,	0,3726,7583,
#Partially deleted in new
chr2	25160984	25168571	chr2:25160984-25168571	1	-	25161080	25164772	0	4	768,182,50,74,	0,3656,4651,7513,
#Partially deleted in new
chr2	25161052	25168604	chr2:25161052-25168604	1	-	25161080	25164772	0	3	700,152,107,	0,3588,7445,
#Partially deleted in new
chr2	25161145	25168571	chr2:25161145-25168571	0	-	25161145	25164772	789624	4	607,152,50,74,	0,3495,4490,7352,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	25204312	25209202	chr2:25204312-25209202	3	+	25204312	25204312	789624	2	237,229,	0,4661,
#Partially deleted in new
chr2	25227854	25342590	chr2:25227854-25342590	3	-	25234278	25313984	0	23	6566,119,70,86,149,91,146,85,184,113,80,45,150,157,108,159,216,147,44,271,105,249,161,	0,7852,9081,11275,12447,12785,13707,16043,16300,16685,17398,18165,18305,18765,19196,19736,20182,47086,47645,54586,72284,86058,114575,
#Partially deleted in new
chr2	25232975	25341885	chr2:25232975-25341885	1	-	25234278	25313984	0	23	1445,119,70,86,149,91,146,85,184,113,80,45,150,157,108,159,216,147,44,271,105,249,60,	0,2731,3960,6154,7326,7664,8586,10922,11179,11564,12277,13044,13184,13644,14075,14615,15061,41965,42524,49465,67163,80937,108850,
#Partially deleted in new
chr2	25232975	25252311	chr2:25232975-25252311	1	-	25234278	25252197	0	19	1445,119,70,86,149,91,146,85,184,113,80,45,150,157,108,159,216,68,118,	0,2731,3960,6154,7326,7664,8586,10922,11179,11564,12277,13044,13184,13644,14075,14615,15061,16681,19218,
#Partially deleted in new
chr2	25232976	25342489	chr2:25232976-25342489	0	-	25239489	25313984	789624	24	1444,119,70,86,199,149,91,146,85,184,113,80,45,150,157,108,159,216,147,44,271,105,249,60,	0,2730,3959,6153,6338,7325,7663,8585,10921,11178,11563,12276,13043,13183,13643,14074,14614,15060,41964,42523,49464,67162,80936,109453,
#Partially deleted in new
chr2	25234196	25252311	chr2:25234196-25252311	1	-	25234278	25248222	789624	18	224,119,70,86,149,91,146,85,184,113,80,45,150,157,108,159,216,118,	0,1510,2739,4933,6105,6443,7365,9701,9958,10343,11056,11823,11963,12423,12854,13394,13840,17997,
#Partially deleted in new
chr2	25235705	25244324	chr2:25235705-25244324	0	-	25235705	25235705	8553170	7	120,86,149,91,146,85,170,	0,3424,4596,4934,5856,8192,8449,
#Partially deleted in new
chr2	25235784	25243979	chr2:25235784-25243979	0	-	25235784	25235784	8553170	6	41,70,86,149,91,82,	0,1151,3345,4517,4855,8113,
#Partially deleted in new
chr2	25236929	25243970	chr2:25236929-25243970	0	-	25236929	25236929	8553170	5	76,86,91,146,73,	0,2200,3710,4632,6968,
#Partially deleted in new
chr2	25236973	25242015	chr2:25236973-25242015	0	-	25236973	25236973	8553170	5	32,86,149,91,454,	0,2156,3328,3666,4588,
#Partially deleted in new
chr2	25239175	25243982	chr2:25239175-25243982	0	-	25239175	25239175	8553170	5	40,149,91,216,85,	0,1126,1464,2386,4722,
#Deleted in new
chr2	25245261	25247899	chr2:25245261-25247899	0	-	25245261	25245261	8553170	6	71,45,150,157,108,309,	0,758,898,1358,1789,2329,
#Deleted in new
chr2	25246673	25247566	chr2:25246673-25247566	0	-	25246673	25246673	8553170	2	103,516,	0,377,
#Partially deleted in new
chr2	25246756	25249703	chr2:25246756-25249703	0	-	25246756	25246756	8553170	5	20,108,159,216,86,	0,294,834,1280,2861,
#Partially deleted in new
chr2	25247049	25252083	chr2:25247049-25252083	0	-	25247049	25247049	8553170	4	109,159,216,172,	0,541,987,4862,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	25281451	25342590	chr2:25281451-25342590	1	-	25282387	25313984	0	4	1260,105,249,161,	0,18687,32461,60978,
#Deleted in new
chr2	25328639	25328721	chr2:25328639-25328721	3	-	25328639	25328639	5263520	1	82,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	25369135	25370687	chr2:25369135-25370687	1	-	25369135	25369135	8553170	1	1552,	0,
#Partially deleted in new
chr2	25369172	25375845	chr2:25369172-25375845	3	-	25369172	25369172	8553170	2	162,257,	0,6416,
#Partially deleted in new
chr2	25377197	25650222	chr2:25377197-25650222	1	-	25379318	25628361	789624	18	356,34,90,160,97,114,86,88,90,78,125,167,106,155,86,214,81,201,	0,2092,10091,11004,50337,55688,56712,74350,78207,105598,154275,199640,203523,218888,230038,250973,261816,272824,
#Partially deleted in new
chr2	25377242	25673550	chr2:25377242-25673550	0	-	25580824	25652660	789624	18	311,34,90,160,97,114,86,88,90,78,125,167,106,86,214,81,68,165,	0,2047,10046,10959,50292,55643,56667,74305,78162,105553,154230,199595,203478,229993,250928,261771,275351,296143,
#Partially deleted in new
chr2	25377242	25673634	chr2:25377242-25673634	1	-	25379318	25652660	789624	20	311,34,54,160,21,97,114,86,88,90,78,125,167,106,155,86,214,81,68,249,	0,2047,6593,10959,42272,50292,55643,56667,74305,78162,105553,154230,199595,203478,218843,229993,250928,261771,275351,296143,
#Partially deleted in new
chr2	25377242	25673634	chr2:25377242-25673634	1	-	25379318	25652660	789624	18	311,34,54,160,97,114,86,88,78,125,167,106,155,86,214,81,68,249,	0,2047,6593,10959,50292,55643,56667,74305,105553,154230,199595,203478,218843,229993,250928,261771,275351,296143,
#Partially deleted in new
chr2	25377242	25673634	chr2:25377242-25673634	3	-	25379318	25652660	789624	21	311,34,54,90,160,21,97,114,86,88,90,78,125,167,106,155,86,214,81,68,249,	0,2047,6593,10046,10959,42272,50292,55643,56667,74305,78162,105553,154230,199595,203478,218843,229993,250928,261771,275351,296143,
#Partially deleted in new
chr2	25377242	25673634	chr2:25377242-25673634	1	-	25379318	25652660	789624	19	311,34,54,160,21,97,114,86,88,78,125,167,106,155,86,214,81,68,249,	0,2047,6593,10959,42272,50292,55643,56667,74305,105553,154230,199595,203478,218843,229993,250928,261771,275351,296143,
#Partially deleted in new
chr2	25377242	25673634	chr2:25377242-25673634	1	-	25379318	25652660	789624	20	311,34,90,160,21,97,114,86,88,90,78,125,167,106,155,86,214,81,68,249,	0,2047,10046,10959,42272,50292,55643,56667,74305,78162,105553,154230,199595,203478,218843,229993,250928,261771,275351,296143,
#Partially deleted in new
chr2	25377244	25673647	chr2:25377244-25673647	1	-	25379318	25652660	789624	20	309,34,54,90,160,97,114,86,88,90,78,125,167,106,155,86,214,81,68,262,	0,2045,6591,10044,10957,50290,55641,56665,74303,78160,105551,154228,199593,203476,218841,229991,250926,261769,275349,296141,
#Partially deleted in new
chr2	25377244	25386095	chr2:25377244-25386095	0	-	25377244	25377244	8553170	3	309,34,69,	0,2045,8782,
#Partially deleted in new
chr2	25377257	25673561	chr2:25377257-25673561	1	-	25379318	25652660	789624	19	296,34,54,90,160,97,114,86,88,78,125,167,106,155,86,214,81,68,176,	0,2032,6578,10031,10944,50277,55628,56652,74290,105538,154215,199580,203463,218828,229978,250913,261756,275336,296128,
#Partially deleted in new
chr2	25377283	25673596	chr2:25377283-25673596	0	-	25580782	25652660	789624	15	270,34,90,160,97,114,86,88,78,125,167,106,81,68,211,	0,2006,10005,10918,50251,55602,56626,74264,105512,154189,199554,203437,261730,275310,296102,
#Deleted in new
chr2	25377312	25379913	chr2:25377312-25379913	0	-	25377312	25377312	8553170	2	241,624,	0,1977,
#Partially deleted in new
chr2	25383682	25428016	chr2:25383682-25428016	0	-	25383682	25383682	8553170	3	207,160,482,	0,4519,43852,
#Partially deleted in new
chr2	25387193	25481645	chr2:25387193-25481645	0	-	25387193	25387193	8553170	8	185,160,97,114,86,88,90,45,	0,1008,40341,45692,46716,64354,68211,94407,
#Deleted in new
chr2	25387223	25388640	chr2:25387223-25388640	0	-	25387223	25387223	8553170	2	155,439,	0,978,
#Partially deleted in new
chr2	25388260	25481845	chr2:25388260-25481845	0	-	25388260	25388260	8553170	6	101,97,114,86,88,245,	0,39274,44625,45649,63287,93340,
#Partially deleted in new
chr2	25388317	25497651	chr2:25388317-25497651	0	-	25388317	25388317	8553170	7	44,97,114,86,88,78,60,	0,39217,44568,45592,63230,94478,109274,
#Partially deleted in new
chr2	25419101	25652660	chr2:25419101-25652660	0	-	25419101	25419101	8553170	15	434,97,114,86,88,90,78,125,167,106,155,86,214,81,67,	0,8433,13784,14808,32446,36303,63694,112371,157736,161619,176984,188134,209069,219912,233492,
#Partially deleted in new
chr2	25421116	25427643	chr2:25421116-25427643	3	+	25421116	25421116	8553170	3	107,130,177,	0,5469,6350,
#Partially deleted in new
chr2	25433909	25497585	chr2:25433909-25497585	0	-	25433909	25433909	8553170	4	86,88,78,284,	0,17638,48886,63392,
#Partially deleted in new
chr2	25433909	25497619	chr2:25433909-25497619	0	-	25433909	25433909	8553170	4	86,88,78,322,	0,17638,48886,63388,
#Partially deleted in new
chr2	25576515	25673429	chr2:25576515-25673429	0	-	25576515	25576515	8553170	6	489,106,214,81,68,44,	0,4205,51655,62498,76078,96870,
#Partially deleted in new
chr2	25576563	25596456	chr2:25576563-25596456	0	-	25576563	25576563	8553170	3	441,106,371,	0,4157,19522,
#Partially deleted in new
chr2	25576828	25649930	chr2:25576828-25649930	0	-	25576828	25576828	8553170	6	176,106,155,214,81,94,	0,3892,19257,51342,62185,73008,
#Partially deleted in new
chr2	25576952	25599043	chr2:25576952-25599043	0	-	25576952	25576952	8553170	4	52,106,155,241,	0,3768,19133,21850,
#Partially deleted in new
chr2	25594888	25607293	chr2:25594888-25607293	0	-	25594888	25594888	8553170	3	300,155,58,	0,1197,12347,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	25596123	25653180	chr2:25596123-25653180	0	-	25596123	25652660	789624	6	117,86,214,81,68,256,	0,11112,32047,42890,56470,56801,
#Partially deleted in new
chr2	25607257	25650222	chr2:25607257-25650222	0	-	25607257	25607257	8553170	4	64,214,81,201,	0,20913,31756,42764,
#Partially deleted in new
chr2	25607286	25672946	chr2:25607286-25672946	0	-	25607286	25652660	789624	5	35,214,81,68,167,	0,20884,31727,45307,65493,
#Partially deleted in new
chr2	25628170	25639328	chr2:25628170-25639328	0	-	25628170	25628170	8553170	2	214,315,	0,10843,
#Partially deleted in new
chr2	25628182	25673488	chr2:25628182-25673488	0	-	25628182	25628182	8553170	3	202,68,103,	0,24411,45203,
#Partially deleted in new
chr2	25733752	25878516	chr2:25733752-25878516	3	-	25742028	25878222	789624	13	10724,718,106,97,164,144,127,101,151,109,3,83,351,	0,15943,19781,22265,25729,33830,34989,37687,65632,72476,101785,111728,144413,
#Partially deleted in new
chr2	25737691	25878466	chr2:25737691-25878466	1	-	25742028	25845536	789624	12	6785,718,106,97,164,144,127,101,151,112,83,301,	0,12004,15842,18326,21790,29891,31050,33748,61693,68537,107789,140474,
#Partially deleted in new
chr2	25741924	25780309	chr2:25741924-25780309	1	-	25742028	25759640	789624	10	1132,649,718,106,97,164,144,127,101,61,	0,1903,7771,11609,14093,17557,25658,26817,29515,38324,
#Partially deleted in new
chr2	25768761	25830891	chr2:25768761-25830891	0	-	25768761	25768761	8553170	5	107,101,151,109,81,	0,2678,30623,37467,62049,
#Partially deleted in new
chr2	25809924	25810656	chr2:25809924-25810656	7	-	25809924	25809924	16724991	1	732,	0,
#Deleted in new
chr2	25822468	25822950	chr2:25822468-25822950	7	+	25822468	25822468	16724991	1	482,	0,
#Deleted in new
chr2	25856460	25856966	chr2:25856460-25856966	7	-	25856460	25856460	16724991	1	506,	0,
#Partially deleted in new
chr2	25886963	25887206	chr2:25886963-25887206	7	-	25886963	25886963	16724991	1	243,	0,
#Partially deleted in new
chr2	25926595	25982497	chr2:25926595-25982497	3	-	25928977	25981917	789624	8	2476,173,109,117,119,123,102,2125,	0,2709,3359,25193,27671,28945,29747,53777,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	25926601	25982497	chr2:25926601-25982497	0	-	25938296	25981917	789624	9	2470,173,109,114,117,119,123,102,2125,	0,2703,3353,11633,25187,27665,28939,29741,53771,
#Partially deleted in new
chr2	25928752	25982749	chr2:25928752-25982749	1	-	25928977	25981917	789624	9	319,173,109,117,119,123,102,1756,362,	0,552,1202,23036,25514,26788,27590,51620,53635,
#Partially deleted in new
chr2	25929418	25951919	chr2:25929418-25951919	0	-	25929418	25929418	8553170	3	59,106,131,	0,536,22370,
#Partially deleted in new
chr2	25951369	25956439	chr2:25951369-25956439	0	-	25951369	25951369	8553170	4	536,119,123,97,	0,2897,4171,4973,
#Partially deleted in new
chr2	25954130	25980622	chr2:25954130-25980622	0	-	25954130	25954130	8553170	4	255,123,102,250,	0,1410,2212,26242,
#Deleted in new
chr2	25994793	25995081	chr2:25994793-25995081	7	+	25994793	25994793	16724991	1	288,	0,
#Deleted in new
chr2	26028207	26028612	chr2:26028207-26028612	7	-	26028207	26028207	16724991	2	252,120,	0,285,
#Partially deleted in new
chr2	26034106	26135347	chr2:26034106-26135347	0	+	26034106	26034106	8553170	5	629,61,90,102,410,	0,64555,93037,93743,100831,
#Partially deleted in new
chr2	26034109	26137454	chr2:26034109-26137454	3	+	26034608	26135021	0	6	626,61,139,90,102,2517,	0,64552,75658,93034,93740,100828,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	26042674	26042781	chr2:26042674-26042781	3	+	26042674	26042674	8553170	1	107,	0,
#Partially deleted in new
chr2	26098529	26135036	chr2:26098529-26135036	0	+	26098529	26098529	8553170	6	48,61,139,135,102,99,	0,132,11238,28614,29320,36408,
#Partially deleted in new
chr2	26098529	26135068	chr2:26098529-26135068	0	+	26098529	26098529	8553170	6	48,61,139,90,102,131,	0,132,11238,28614,29320,36408,
#Deleted in new
chr2	26101316	26102136	chr2:26101316-26102136	7	-	26101316	26101316	16724991	1	820,	0,
#Partially deleted in new
chr2	26140262	26141264	chr2:26140262-26141264	7	-	26140262	26140262	16724991	2	175,177,	0,825,
#Partially deleted in new
chr2	26149203	26150731	chr2:26149203-26150731	7	+	26149203	26149203	16724991	2	547,669,	0,859,
#Partially deleted in new
chr2	26160022	26161136	chr2:26160022-26161136	7	+	26160022	26160022	16724991	3	192,109,133,	0,543,981,
#Partially deleted in new
chr2	26162055	26162554	chr2:26162055-26162554	7	+	26162055	26162055	16724991	1	499,	0,
#Partially deleted in new
chr2	26173090	26189663	chr2:26173090-26189663	3	+	26173220	26188257	789624	6	242,141,131,1044,170,2433,	0,3253,9876,11142,13098,14140,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	26180715	26189644	chr2:26180715-26189644	1	+	26182471	26188257	789624	6	1778,131,1044,170,85,1930,	0,2251,3517,5473,6515,6999,
#Partially deleted in new
chr2	26185231	26187458	chr2:26185231-26187458	0	+	26185231	26185231	8553170	2	45,228,	0,1999,
#Partially deleted in new
chr2	26190634	26244726	chr2:26190634-26244726	3	-	26191249	26244596	789624	20	761,146,115,196,69,141,87,172,135,110,57,119,123,103,120,139,134,71,42,197,	0,848,1675,2942,3935,4457,7056,10514,13427,19145,21935,23808,24418,39557,41525,43582,46220,48299,48467,53895,
#Partially deleted in new
chr2	26190654	26244604	chr2:26190654-26244604	1	-	26191249	26244596	789624	19	974,115,196,69,141,87,172,135,110,57,119,123,103,120,139,134,71,42,75,	0,1655,2922,3915,4437,7036,10494,13407,19125,21915,23788,24398,39537,41505,43562,46200,48279,48447,53875,
#Partially deleted in new
chr2	26190670	26244610	chr2:26190670-26244610	0	-	26239101	26244596	789624	19	958,115,196,69,141,87,172,135,110,57,119,123,103,120,139,134,71,42,86,	0,1639,2906,3899,4421,7020,10478,13391,19109,21899,23772,24382,39521,41489,43546,46184,48263,48431,53854,
#Partially deleted in new
chr2	26190880	26244616	chr2:26190880-26244616	1	-	26191249	26244596	789624	19	515,146,115,196,69,141,87,172,135,110,57,134,123,103,139,134,71,42,87,	0,602,1429,2696,3689,4211,6810,10268,13181,18899,21689,23562,24172,39311,43336,45974,48053,48221,53649,
#Partially deleted in new
chr2	26190888	26244626	chr2:26190888-26244626	0	-	26239101	26244596	789624	20	507,146,115,196,69,141,87,172,135,110,57,119,123,103,120,139,134,71,42,102,	0,594,1421,2688,3681,4203,6802,10260,13173,18891,21681,23554,24164,39303,41271,43328,45966,48045,48213,53636,
#Partially deleted in new
chr2	26190921	26244604	chr2:26190921-26244604	0	-	26210715	26244596	789624	21	474,146,115,196,69,141,87,172,135,110,120,57,119,123,103,120,139,134,71,42,75,	0,561,1388,2655,3648,4170,6769,10227,13140,18858,19773,21648,23521,24131,39270,41238,43295,45933,48012,48180,53608,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	26191058	26214449	chr2:26191058-26214449	0	-	26210715	26214449	789624	13	337,146,115,196,69,141,87,172,135,110,270,57,7,	0,424,1251,2518,3511,4033,6632,10090,13003,18721,19486,21511,23384,
#Partially deleted in new
chr2	26191249	26244596	chr2:26191249-26244596	0	-	26234286	26244596	789624	19	146,146,115,196,69,141,87,172,135,110,57,119,123,103,120,139,71,42,67,	0,233,1060,2327,3320,3842,6441,9899,12812,18530,21320,23193,23803,38942,40910,42967,47684,47852,53280,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	26211936	26244607	chr2:26211936-26244607	0	-	26211936	26211936	8553170	9	690,119,123,103,120,139,71,42,78,	0,2506,3116,18255,20223,22280,26997,27165,32593,
#Partially deleted in new
chr2	26243169	26278620	chr2:26243169-26278620	0	+	26254254	26278620	789624	8	100,72,45,100,45,100,88,7,	0,11077,11260,20210,26783,30481,33903,35444,
#Partially deleted in new
chr2	26244747	26290464	chr2:26244747-26290464	1	+	26254254	26289953	789624	15	243,72,45,100,100,88,188,181,122,80,48,88,75,165,547,	0,9499,9682,18632,28903,32325,33866,34387,35246,38097,38256,39369,40135,40659,45170,
#Partially deleted in new
chr2	26244894	26290468	chr2:26244894-26290468	3	+	26254254	26289953	789624	16	96,72,45,100,45,100,88,188,181,122,80,48,88,75,165,551,	0,9352,9535,18485,25058,28756,32178,33719,34240,35099,37950,38109,39222,39988,40512,45023,
#Partially deleted in new
chr2	26244919	26254956	chr2:26244919-26254956	0	+	26244919	26244919	8553170	3	71,72,527,	0,9327,9510,
#Partially deleted in new
chr2	26244925	26290412	chr2:26244925-26290412	1	+	26254254	26289953	789624	14	65,72,45,100,45,100,88,122,80,48,88,75,165,495,	0,9321,9504,18454,25027,28725,32147,35068,37919,38078,39191,39957,40481,44992,
#Partially deleted in new
chr2	26244978	26278698	chr2:26244978-26278698	0	+	26254254	26278698	789624	8	161,72,45,100,45,100,88,85,	0,9268,9451,18401,24974,28672,32094,33635,
#Partially deleted in new
chr2	26245129	26269997	chr2:26245129-26269997	0	+	26254254	26269997	789624	5	312,72,45,100,45,	0,9117,9300,18250,24823,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	26260537	26290464	chr2:26260537-26290464	0	+	26260537	26260537	8553170	14	1056,100,45,100,88,188,181,122,80,48,88,75,165,547,	0,2842,9415,13113,16535,18076,18597,19456,22307,22466,23579,24345,24869,29380,
#Partially deleted in new
chr2	26261020	26290464	chr2:26261020-26290464	1	+	26261020	26289953	789624	14	43,100,45,100,88,188,181,122,80,48,88,75,165,547,	0,2359,8932,12630,16052,17593,18114,18973,21824,21983,23096,23862,24386,28897,
#Partially deleted in new
chr2	26308172	26345802	chr2:26308172-26345802	0	-	26308172	26308172	8553170	15	935,56,63,42,1383,180,197,144,106,183,246,174,144,67,92,	0,1353,1870,2023,2519,4770,5204,5587,6241,6451,7349,8102,8739,9323,37538,
#Partially deleted in new
chr2	26308175	26346743	chr2:26308175-26346743	0	-	26313468	26346234	789624	9	932,56,63,42,1383,180,197,144,623,	0,1350,1867,2020,2516,4767,5201,5584,37945,
#Partially deleted in new
chr2	26308394	26346817	chr2:26308394-26346817	3	-	26309085	26346234	789624	12	713,56,63,42,1383,180,197,144,210,144,67,697,	0,1131,1648,1801,2297,4548,4982,5365,6019,8517,9101,37726,
#Partially deleted in new
chr2	26308511	26346817	chr2:26308511-26346817	0	-	26309085	26346234	789624	13	168,142,56,63,42,1383,180,197,144,210,144,67,697,	0,454,1014,1531,1684,2180,4431,4865,5248,5902,8400,8984,37609,
#Partially deleted in new
chr2	26308546	26373506	chr2:26308546-26373506	0	+	26364340	26373506	789624	5	111,69,109,75,140,	0,55755,56285,58599,64820,
#Partially deleted in new
chr2	26309215	26319102	chr2:26309215-26319102	1	-	26309521	26319049	789624	13	366,63,42,1383,180,197,144,210,246,174,144,67,137,	0,827,980,1476,3727,4161,4544,5198,6306,7059,7696,8280,9750,
#Partially deleted in new
chr2	26309943	26319049	chr2:26309943-26319049	1	-	26309943	26319049	789624	13	162,42,1383,180,197,144,210,246,174,144,67,113,178,	0,252,748,2999,3433,3816,4470,5578,6331,6968,7552,8067,8928,
#Partially deleted in new
chr2	26316243	26346310	chr2:26316243-26346310	0	-	26316243	26316243	8553170	4	205,144,67,190,	0,668,1252,29877,
#Partially deleted in new
chr2	26316973	26346768	chr2:26316973-26346768	0	-	26316973	26346234	789624	4	82,67,312,114,	0,522,29147,29681,
#Partially deleted in new
chr2	26340364	26345814	chr2:26340364-26345814	0	-	26340364	26340364	8553170	2	152,104,	0,5346,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	26346085	26395891	chr2:26346085-26395891	1	+	26346232	26389103	789624	11	204,69,109,75,263,109,49,181,183,63,6821,	0,18216,18746,21060,27281,28954,37213,38873,40268,42919,42985,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	26346113	26395891	chr2:26346113-26395891	3	+	26346232	26389103	789624	10	176,69,109,75,263,109,49,181,183,6887,	0,18188,18718,21032,27253,28926,37185,38845,40240,42891,
#Partially deleted in new
chr2	26346148	26385139	chr2:26346148-26385139	0	+	26346232	26385139	789624	6	141,69,109,75,49,181,	0,18153,18683,20997,37150,38810,
#Deleted in new
chr2	26346177	26346900	chr2:26346177-26346900	0	+	26346177	26346177	8553170	2	112,312,	0,411,
#Partially deleted in new
chr2	26401915	26456711	chr2:26401915-26456711	3	+	26401989	26456517	789624	17	229,88,113,184,138,87,123,140,135,233,113,90,90,230,144,103,251,	0,12428,19372,22355,27712,28870,29968,38462,42306,42800,46775,48080,48676,51404,52731,53215,54545,
#Partially deleted in new
chr2	26401937	26444899	chr2:26401937-26444899	0	+	26401989	26429634	789624	8	207,88,113,138,87,123,135,184,	0,12406,19350,27690,28848,29946,42284,42778,
#Partially deleted in new
chr2	26402003	26456677	chr2:26402003-26456677	0	+	26402003	26444230	8553170	16	141,88,113,184,138,87,123,135,233,113,90,90,230,144,103,217,	0,12340,19284,22267,27624,28782,29880,42218,42712,46687,47992,48588,51316,52643,53127,54457,
#Partially deleted in new
chr2	26421153	26431990	chr2:26421153-26431990	0	+	26421153	26421153	8553170	4	247,138,87,107,	0,8474,9632,10730,
#Partially deleted in new
chr2	26421154	26430798	chr2:26421154-26430798	0	+	26421154	26421154	8553170	4	246,184,138,13,	0,3116,8473,9631,
#Partially deleted in new
chr2	26430488	26444258	chr2:26430488-26444258	0	+	26430488	26430488	8553170	5	165,87,123,140,37,	0,297,1395,9889,13733,
#Partially deleted in new
chr2	26430506	26444945	chr2:26430506-26444945	0	+	26430506	26430506	8553170	5	366,123,140,135,230,	0,1377,9871,13715,14209,
#Partially deleted in new
chr2	26448298	26453482	chr2:26448298-26453482	0	+	26448298	26448298	8553170	5	126,113,90,90,163,	0,392,1697,2293,5021,
#Partially deleted in new
chr2	26457202	26558698	chr2:26457202-26558698	3	-	26460024	26558571	789624	47	1018,198,101,179,242,99,89,143,161,171,128,138,135,137,67,129,30,131,163,162,120,162,135,125,190,153,117,91,101,121,181,109,224,187,187,160,85,63,132,55,127,74,182,100,89,59,206,	0,2805,3444,3649,4493,4880,6280,6761,7666,8469,8746,9511,9896,10162,11205,13390,13918,15316,15929,16203,16788,17310,18156,18711,18925,19688,19969,20213,20446,22061,22270,23000,23583,25203,26259,27271,32008,32475,37739,44551,45097,46569,59215,61807,70629,80513,101290,
#Partially deleted in new
chr2	26457202	26478042	chr2:26457202-26478042	1	-	26460024	26477722	789624	30	1018,198,101,179,242,99,89,143,161,171,128,138,135,137,67,129,30,71,163,162,120,162,135,125,190,153,117,91,101,199,	0,2805,3444,3649,4493,4880,6280,6761,7666,8469,8746,9511,9896,10162,11205,13390,13918,15316,15929,16203,16788,17310,18156,18711,18925,19688,19969,20213,20446,20641,
#Partially deleted in new
chr2	26457202	26478042	chr2:26457202-26478042	1	-	26458039	26477722	789624	29	1018,101,179,242,99,89,143,161,171,128,138,135,137,67,129,30,71,163,162,120,162,135,125,190,153,117,91,101,199,	0,3444,3649,4493,4880,6280,6761,7666,8469,8746,9511,9896,10162,11205,13390,13918,15316,15929,16203,16788,17310,18156,18711,18925,19688,19969,20213,20446,20641,
#Partially deleted in new
chr2	26457202	26478042	chr2:26457202-26478042	1	-	26460024	26477722	789624	29	1018,198,101,179,242,99,89,143,161,171,128,138,135,137,67,129,30,131,163,162,120,162,135,125,190,153,117,91,394,	0,2805,3444,3649,4493,4880,6280,6761,7666,8469,8746,9511,9896,10162,11205,13390,13918,15316,15929,16203,16788,17310,18156,18711,18925,19688,19969,20213,20446,
#Partially deleted in new
chr2	26457203	26558678	chr2:26457203-26558678	1	-	26458039	26558571	789624	46	1017,101,179,242,99,89,143,161,171,128,138,135,137,67,129,30,131,163,162,120,162,135,125,190,153,117,91,101,121,181,109,224,187,187,160,85,63,132,55,127,74,182,100,89,59,186,	0,3443,3648,4492,4879,6279,6760,7665,8468,8745,9510,9895,10161,11204,13389,13917,15315,15928,16202,16787,17309,18155,18710,18924,19687,19968,20212,20445,22060,22269,22999,23582,25202,26258,27270,32007,32474,37738,44550,45096,46568,59214,61806,70628,80512,101289,
#Partially deleted in new
chr2	26460024	26477893	chr2:26460024-26477893	1	-	26460024	26477893	789624	28	181,101,179,242,99,89,143,161,171,128,138,135,137,67,129,30,131,163,162,120,162,135,125,190,153,117,91,245,	0,622,827,1671,2058,3458,3939,4844,5647,5924,6689,7074,7340,8383,10568,11096,12494,13107,13381,13966,14488,15334,15889,16103,16866,17147,17391,17624,
#Partially deleted in new
chr2	26463505	26466325	chr2:26463505-26466325	0	-	26463505	26463505	8553170	5	66,143,161,171,377,	0,458,1363,2166,2443,
#Deleted in new
chr2	26472331	26473541	chr2:26472331-26473541	0	-	26472464	26473541	789624	3	258,163,136,	0,800,1074,
#Partially deleted in new
chr2	26562581	26579532	chr2:26562581-26579532	3	+	26562612	26579438	789624	4	105,274,113,239,	0,13320,14934,16712,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	26562584	26579532	chr2:26562584-26579532	1	+	26572115	26579425	789624	5	102,36,274,113,239,	0,9531,13317,14931,16709,
#Partially deleted in new
chr2	26563034	26579529	chr2:26563034-26579529	0	+	26563034	26563034	8553170	3	75,274,2014,	0,12867,14481,
#Deleted in new
chr2	26576125	26579524	chr2:26576125-26579524	0	+	26576125	26579438	789624	4	50,113,77,231,	0,1390,2651,3168,
#Partially deleted in new
chr2	26581201	26641368	chr2:26581201-26641368	3	-	26581362	26641314	789624	7	192,89,110,142,97,35,108,	0,1623,2587,13974,48208,59331,60059,
#Partially deleted in new
chr2	26581206	26605563	chr2:26581206-26605563	0	-	26581206	26581206	8553170	5	187,89,110,142,62,	0,1618,2582,13969,24295,
#Partially deleted in new
chr2	26581339	26623627	chr2:26581339-26623627	0	-	26581339	26581339	8553170	5	54,89,110,142,214,	0,1485,2449,13836,42074,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	26671253	26674464	chr2:26671253-26674464	3	-	26671253	26671253	8553170	3	420,60,87,	0,2210,3124,
#Deleted in new
chr2	26678218	26678510	chr2:26678218-26678510	7	-	26678218	26678218	16724991	1	292,	0,
#Partially deleted in new
chr2	26692689	26729255	chr2:26692689-26729255	1	+	26727752	26728568	789624	3	79,288,1589,	0,181,34977,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	26692750	26733420	chr2:26692750-26733420	3	+	26692875	26728568	789624	2	408,5754,	0,34916,
#Duplicated in new
chr2	26764283	26781140	chr2:26764283-26781140	0	+	26764349	26775134	789624	5	143,172,213,111,3099,	0,10760,11180,12088,13758,
#Duplicated in new
chr2	26764287	26781231	chr2:26764287-26781231	3	+	26764349	26778511	789624	6	139,73,172,213,111,3190,	0,9963,10756,11176,12084,13754,
#Partially deleted in new
chr2	26764288	26794589	chr2:26764288-26794589	0	+	26764288	26764288	8553170	4	138,110,182,778,	0,27842,28856,29523,
#Partially deleted in new
chr2	26764289	26778219	chr2:26764289-26778219	0	+	26764289	26764289	8553170	3	137,213,178,	0,11174,13752,
#Duplicated in new
chr2	26764324	26781147	chr2:26764324-26781147	0	+	26764349	26775469	789624	5	102,73,213,111,3106,	0,9926,11139,12047,13717,
#Partially deleted in new
chr2	26785996	26794593	chr2:26785996-26794593	3	+	26786196	26793279	0	5	300,110,78,182,782,	0,6134,6759,7148,7815,
#Partially deleted in new
chr2	26786026	26794076	chr2:26786026-26794076	0	+	26786026	26786026	8553170	5	54,110,78,182,265,	0,6104,6729,7118,7785,
#Partially deleted in new
chr2	26786067	26794589	chr2:26786067-26794589	1	+	26786196	26793279	0	4	229,110,182,778,	0,6063,7077,7744,
#Partially deleted in new
chr2	26786101	26793942	chr2:26786101-26793942	0	+	26786196	26792552	789624	5	195,110,332,182,131,	0,6029,6400,7043,7710,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	26786142	26801067	chr2:26786142-26801067	0	+	26786142	26786142	8553170	6	154,110,78,182,82,139,	0,5988,6613,7002,7669,14786,
#Deleted in new
chr2	26827168	26827520	chr2:26827168-26827520	7	-	26827168	26827168	16724991	1	352,	0,
#Partially deleted in new
chr2	26847746	26927328	chr2:26847746-26927328	0	+	26898499	26927328	789624	4	121,265,159,76,	0,50749,77140,79506,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	26848100	26950351	chr2:26848100-26950351	3	+	26898499	26946995	0	13	154,265,159,180,69,45,76,157,142,143,208,169,3442,	0,50395,76786,79152,80154,83539,85157,86477,91930,93849,94442,96555,98809,
#Partially deleted in new
chr2	26848288	26947197	chr2:26848288-26947197	1	+	26898499	26946995	0	13	71,265,159,180,69,45,76,157,142,143,208,169,288,	0,50207,76598,78964,79966,83351,84969,86289,91742,93661,94254,96367,98621,
#Partially deleted in new
chr2	26848423	26927401	chr2:26848423-26927401	0	+	26898499	26927401	789624	4	74,265,159,149,	0,50072,76463,78829,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	26848423	26950350	chr2:26848423-26950350	1	+	26898499	26946995	0	13	74,265,159,180,69,45,76,157,142,143,208,169,3441,	0,50072,76463,78829,79831,83216,84834,86154,91607,93526,94119,96232,98486,
#Partially deleted in new
chr2	26848507	26927356	chr2:26848507-26927356	0	+	26898499	26927356	789624	4	32,265,159,104,	0,49988,76379,78745,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	26938458	26948856	chr2:26938458-26948856	0	+	26938458	26938458	8553170	5	1714,143,208,169,1947,	0,3491,4084,6197,8451,
#Partially deleted in new
chr2	26950307	27009807	chr2:26950307-27009807	3	-	26950307	26950307	8553170	2	274,32,	0,59468,
#Partially deleted in new
chr2	26970611	27027196	chr2:26970611-27027196	3	+	27022218	27026348	0	7	191,128,146,202,155,153,917,	0,51600,52720,53484,54971,55268,55668,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	26970636	27022619	chr2:26970636-27022619	0	+	26970636	26970636	8553170	2	166,408,	0,51575,
#Partially deleted in new
chr2	26970657	27027196	chr2:26970657-27027196	1	+	27022218	27026348	0	7	145,128,146,157,155,153,917,	0,51554,52674,53438,54925,55222,55622,
#Partially deleted in new
chr2	26970660	27024221	chr2:26970660-27024221	0	+	26970660	26970660	8553170	3	142,128,890,	0,51551,52671,
#Partially deleted in new
chr2	27002045	27023945	chr2:27002045-27023945	0	+	27002045	27002045	8553170	3	91,128,614,	0,20166,21286,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	27002855	27022851	chr2:27002855-27022851	0	+	27002855	27002855	8553170	3	224,128,134,	0,19356,19862,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	27011768	27014612	chr2:27011768-27014612	1	-	27011768	27011768	8553170	3	1696,158,112,	0,2166,2732,
#Deleted in new
chr2	27013809	27014561	chr2:27013809-27014561	0	-	27013809	27013809	8553170	2	283,61,	0,691,
#Partially deleted in new
chr2	27014753	27026430	chr2:27014753-27026430	1	+	27022218	27026348	8553170	8	231,160,128,146,157,155,153,151,	0,6617,7458,8578,9342,10829,11126,11526,
#Partially deleted in new
chr2	27014764	27023534	chr2:27014764-27023534	0	+	27014764	27014764	8553170	3	220,128,203,	0,7447,8567,
#Partially deleted in new
chr2	27014767	27025909	chr2:27014767-27025909	0	+	27022218	27025909	789624	6	217,128,146,202,155,30,	0,7444,8564,9328,10815,11112,
#Partially deleted in new
chr2	27014798	27026355	chr2:27014798-27026355	1	+	27022218	27026348	0	7	186,128,146,157,155,153,76,	0,7413,8533,9297,10784,11081,11481,
#Partially deleted in new
chr2	27032909	27035481	chr2:27032909-27035481	0	+	27032909	27032909	8553170	3	257,200,347,	0,1157,2225,
#Partially deleted in new
chr2	27032953	27041695	chr2:27032953-27041695	3	+	27033015	27040837	789624	17	213,200,151,135,83,106,82,102,142,92,49,114,118,97,169,152,985,	0,1113,2181,2640,3016,3533,3751,4123,4607,5192,5530,5748,6093,6787,7076,7391,7757,
#Partially deleted in new
chr2	27032953	27041694	chr2:27032953-27041694	0	+	27033015	27040837	789624	18	213,200,151,135,83,106,82,102,142,92,49,114,118,97,169,152,244,451,	0,1113,2181,2640,3016,3533,3751,4123,4607,5192,5530,5748,6093,6787,7076,7391,7757,8290,
#Partially deleted in new
chr2	27032953	27041666	chr2:27032953-27041666	0	+	27033015	27037801	789624	19	213,200,151,135,83,106,82,102,142,103,92,49,114,118,97,169,152,244,423,	0,1113,2181,2640,3016,3533,3751,4123,4607,4836,5192,5530,5748,6093,6787,7076,7391,7757,8290,
#Partially deleted in new
chr2	27032976	27041693	chr2:27032976-27041693	1	+	27033015	27040837	789624	16	190,200,151,83,106,82,102,142,92,49,114,118,97,169,152,983,	0,1090,2158,2993,3510,3728,4100,4584,5169,5507,5725,6070,6764,7053,7368,7734,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	27033137	27034609	chr2:27033137-27034609	0	+	27033137	27033137	8553170	2	29,543,	0,929,
#Deleted in new
chr2	27035519	27037664	chr2:27035519-27037664	0	+	27035519	27035519	8553170	5	533,106,82,102,104,	0,967,1185,1557,2041,
#Deleted in new
chr2	27036490	27038794	chr2:27036490-27038794	0	+	27036490	27038794	789624	8	102,82,102,142,78,92,49,93,	0,214,586,1070,1324,1655,1993,2211,
#Deleted in new
chr2	27036525	27037815	chr2:27036525-27037815	0	+	27036525	27036525	8553170	4	67,82,102,255,	0,179,551,1035,
#Deleted in new
chr2	27037874	27040492	chr2:27037874-27040492	0	+	27037874	27040492	789624	8	18,206,49,114,118,97,169,148,	0,157,609,827,1172,1866,2155,2470,
#Deleted in new
chr2	27038709	27040999	chr2:27038709-27040999	0	+	27038709	27040372	789624	5	106,118,169,152,289,	0,337,1320,1635,2001,
#Deleted in new
chr2	27039360	27041687	chr2:27039360-27041687	0	+	27039360	27039360	8553170	3	838,152,977,	0,984,1350,
#Deleted in new
chr2	27039919	27041033	chr2:27039919-27041033	0	+	27039919	27039919	8553170	2	577,323,	0,791,
#Partially deleted in new
chr2	27042363	27053154	chr2:27042363-27053154	0	+	27052958	27053154	789624	3	185,132,242,	0,9059,10549,
#Deleted in new
chr2	27049682	27050264	chr2:27049682-27050264	3	-	27049682	27049682	789624	2	322,85,	0,497,
#Partially deleted in new
chr2	27051007	27053980	chr2:27051007-27053980	0	+	27052958	27053980	789624	5	23,132,261,172,85,	0,415,1905,2394,2888,
#Partially deleted in new
chr2	27051645	27070622	chr2:27051645-27070622	0	+	27052958	27069621	789624	16	148,261,172,164,178,179,457,170,136,203,215,153,113,47,134,531,	0,1267,1756,2250,2984,3429,4036,4977,5657,6754,7544,15848,16986,17402,17927,18446,
#Deleted in new
chr2	27051667	27053156	chr2:27051667-27053156	0	+	27052958	27053156	789624	3	126,211,244,	0,665,1245,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	27051667	27056996	chr2:27051667-27056996	0	+	27051667	27051667	8553170	8	126,261,172,164,178,433,457,374,	0,1245,1734,2228,2962,3407,4014,4955,
#Partially deleted in new
chr2	27051677	27059535	chr2:27051677-27059535	1	+	27052958	27059469	789624	11	116,261,172,164,178,179,457,170,136,203,346,	0,1235,1724,2218,2952,3397,4004,4945,5625,6722,7512,
#Partially deleted in new
chr2	27051680	27070620	chr2:27051680-27070620	3	+	27052958	27070263	789624	15	113,261,172,164,178,179,457,170,136,203,215,153,113,134,529,	0,1232,1721,2215,2949,3394,4001,4942,5622,6719,7509,15813,16951,17892,18411,
#Deleted in new
chr2	27051680	27056464	chr2:27051680-27056464	0	+	27051680	27051680	8553170	7	113,261,172,164,178,179,783,	0,1232,1721,2215,2949,3394,4001,
#Deleted in new
chr2	27051904	27053034	chr2:27051904-27053034	0	+	27052958	27053034	789624	2	367,122,	0,1008,
#Deleted in new
chr2	27053617	27054276	chr2:27053617-27054276	3	-	27053617	27053617	8553170	1	659,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	27059265	27067835	chr2:27059265-27067835	0	+	27059265	27067768	789624	2	139,342,	0,8228,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	27061037	27061815	chr2:27061037-27061815	3	+	27061037	27061037	8553170	2	169,170,	0,608,
#Deleted in new
chr2	27062427	27062907	chr2:27062427-27062907	3	-	27062427	27062427	8553170	1	480,	0,
#Deleted in new
chr2	27070471	27071649	chr2:27070471-27071649	1	-	27071348	27071462	0	3	271,138,49,	0,854,1129,
#Deleted in new
chr2	27070471	27071773	chr2:27070471-27071773	3	-	27071348	27071462	0	3	250,138,173,	0,854,1129,
#Deleted in new
chr2	27070486	27071649	chr2:27070486-27071649	1	-	27071348	27071462	0	2	235,324,	0,839,
#Deleted in new
chr2	27078566	27086408	chr2:27078566-27086408	3	+	27079065	27086015	0	8	669,120,221,1929,117,18,138,731,	0,1584,2165,3516,5848,6424,6593,7111,
#Deleted in new
chr2	27083594	27086403	chr2:27083594-27086403	0	+	27083594	27086015	789624	5	432,117,18,138,726,	0,820,1396,1565,2083,
#Partially deleted in new
chr2	27086746	27100751	chr2:27086746-27100751	1	+	27087259	27099750	0	8	605,117,135,73,147,89,158,1087,	0,5585,7730,9982,10756,12449,12673,12918,
#Partially deleted in new
chr2	27086781	27100772	chr2:27086781-27100772	3	+	27087259	27099750	0	8	570,117,135,73,147,89,158,1108,	0,5550,8018,9947,10721,12414,12638,12883,
#Partially deleted in new
chr2	27086783	27099901	chr2:27086783-27099901	0	+	27086783	27086783	8553170	10	129,232,79,117,135,73,147,89,158,237,	0,336,1160,5548,7693,9945,10719,12412,12636,12881,
#Partially deleted in new
chr2	27086793	27099468	chr2:27086793-27099468	0	+	27087259	27099468	789624	8	558,117,135,135,73,147,89,49,	0,5538,7683,8006,9935,10709,12402,12626,
#Deleted in new
chr2	27094197	27097568	chr2:27094197-27097568	0	+	27094197	27094197	8553170	3	414,73,66,	0,2531,3305,
#Partially deleted in new
chr2	27094664	27099969	chr2:27094664-27099969	0	+	27094664	27094664	8553170	6	270,73,147,89,158,305,	0,2064,2838,4531,4755,5000,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	27098888	27119115	chr2:27098888-27119115	1	-	27099783	27104366	789624	6	952,125,71,66,91,270,	0,3208,3471,3637,5398,19957,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	27098888	27119097	chr2:27098888-27119097	0	-	27102193	27104366	789624	6	952,127,207,66,91,252,	0,1527,3126,3637,5398,19957,
#Deleted in new
chr2	27099786	27102150	chr2:27099786-27102150	1	-	27099786	27102150	789624	4	54,127,101,54,	0,629,2001,2310,
#Partially deleted in new
chr2	27100593	27119103	chr2:27100593-27119103	3	-	27101273	27104366	789624	6	1295,125,71,66,91,258,	0,1503,1766,1932,3693,18252,
#Partially deleted in new
chr2	27101026	27118905	chr2:27101026-27118905	1	-	27101273	27104366	789624	6	862,125,71,66,91,131,	0,1070,1333,1499,3260,17748,
#Partially deleted in new
chr2	27101078	27118910	chr2:27101078-27118910	1	-	27101273	27104366	789624	7	383,376,125,71,66,91,65,	0,434,1018,1281,1447,3208,17767,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	27101112	27119030	chr2:27101112-27119030	1	-	27101273	27104366	789624	7	776,125,71,66,91,296,185,	0,984,1247,1413,3174,9560,17733,
#Partially deleted in new
chr2	27101225	27104737	chr2:27101225-27104737	1	-	27101273	27104732	789624	5	663,125,71,66,451,	0,871,1134,1300,3061,
#Partially deleted in new
chr2	27102116	27104359	chr2:27102116-27104359	0	-	27102116	27102116	8553170	2	475,73,	0,2170,
#Partially deleted in new
chr2	27123788	27130812	chr2:27123788-27130812	0	+	27123788	27123788	8553170	7	274,161,417,113,174,190,280,	0,4652,5156,5725,5965,6438,6744,
#Partially deleted in new
chr2	27123788	27130353	chr2:27123788-27130353	1	+	27123948	27130353	789624	7	274,161,183,46,113,174,127,	0,4652,5156,5527,5725,5965,6438,
#Partially deleted in new
chr2	27123822	27130812	chr2:27123822-27130812	0	+	27123948	27130353	789624	8	240,161,183,46,113,174,190,280,	0,4618,5122,5493,5691,5931,6404,6710,
#Partially deleted in new
chr2	27123834	27130812	chr2:27123834-27130812	3	+	27123948	27130744	789624	9	228,161,183,46,113,174,49,166,280,	0,4606,5110,5481,5679,5919,6270,6416,6698,
#Partially deleted in new
chr2	27123835	27130812	chr2:27123835-27130812	0	+	27123976	27129553	789624	6	227,183,113,174,190,280,	0,5109,5678,5918,6391,6697,
#Partially deleted in new
chr2	27123839	27129856	chr2:27123839-27129856	0	+	27123976	27129856	789624	5	223,183,46,113,103,	0,5105,5476,5674,5914,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	27123854	27126961	chr2:27123854-27126961	0	+	27123854	27123854	8553170	1	3107,	0,
#Deleted in new
chr2	27130114	27130687	chr2:27130114-27130687	0	+	27130114	27130114	8553170	2	302,155,	0,418,
#Deleted in new
chr2	27130755	27134675	chr2:27130755-27134675	3	-	27131413	27134421	0	9	753,160,73,174,125,81,221,190,389,	0,916,1254,1474,1847,2087,2361,2776,3531,
#Deleted in new
chr2	27130755	27134629	chr2:27130755-27134629	0	-	27130755	27130755	8553170	6	753,411,174,125,81,1513,	0,916,1474,1847,2087,2361,
#Deleted in new
chr2	27130764	27134615	chr2:27130764-27134615	0	-	27133636	27134421	789624	9	744,160,73,174,125,81,221,123,329,	0,907,1245,1465,1838,2078,2352,2767,3522,
#Deleted in new
chr2	27130774	27134612	chr2:27130774-27134612	1	-	27131413	27134421	789624	8	734,160,73,125,81,221,190,326,	0,897,1235,1828,2068,2342,2757,3512,
#Deleted in new
chr2	27130790	27132385	chr2:27130790-27132385	0	-	27131366	27132385	789624	4	718,158,73,156,	0,883,1219,1439,
#Deleted in new
chr2	27131158	27132620	chr2:27131158-27132620	0	-	27131454	27132620	789624	4	350,73,174,18,	0,851,1071,1444,
#Deleted in new
chr2	27131439	27132252	chr2:27131439-27132252	0	-	27132062	27132252	789624	4	69,160,73,49,	0,232,570,764,
#Deleted in new
chr2	27132510	27134666	chr2:27132510-27134666	0	-	27132510	27132510	8553170	4	217,81,605,380,	0,332,606,1776,
#Deleted in new
chr2	27133123	27134636	chr2:27133123-27134636	0	-	27133123	27133123	8553170	2	214,350,	0,1163,
#Deleted in new
chr2	27136847	27139410	chr2:27136847-27139410	3	-	27137090	27138329	789624	3	1847,53,108,	0,2122,2455,
#Deleted in new
chr2	27136914	27139403	chr2:27136914-27139403	1	-	27136914	27138329	789624	4	897,389,53,101,	0,1391,2055,2388,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	27149003	27156974	chr2:27149003-27156974	3	+	27149133	27152867	789624	3	352,243,4287,	0,1119,3684,
#Partially deleted in new
chr2	27149024	27149949	chr2:27149024-27149949	0	+	27149024	27149024	8553170	2	331,241,	0,684,
#Deleted in new
chr2	27158562	27159229	chr2:27158562-27159229	7	-	27158562	27158562	16724991	2	146,117,	0,550,
#Partially deleted in new
chr2	27199586	27212286	chr2:27199586-27212286	3	-	27200435	27207650	789624	17	993,116,104,182,87,68,113,89,130,141,155,68,52,66,533,67,267,	0,1411,1763,2079,2401,3226,3646,4192,4874,5204,5763,6439,6896,7290,7671,11880,12433,
#Partially deleted in new
chr2	27199586	27203049	chr2:27199586-27203049	0	-	27199586	27199586	8553170	3	993,1077,237,	0,1411,3226,
#Partially deleted in new
chr2	27199588	27212146	chr2:27199588-27212146	0	-	27199588	27199588	789624	17	249,475,116,104,182,87,533,89,130,141,155,68,52,66,533,67,127,	0,516,1409,1761,2077,2399,3224,4190,4872,5202,5761,6437,6894,7288,7669,11878,12431,
#Partially deleted in new
chr2	27200435	27211752	chr2:27200435-27211752	1	-	27200435	27207650	789624	18	144,116,104,182,87,68,113,89,130,141,155,68,52,66,533,73,67,42,	0,562,914,1230,1552,2377,2797,3343,4025,4355,4914,5590,6047,6441,6822,8178,11031,11275,
#Partially deleted in new
chr2	27201101	27203303	chr2:27201101-27203303	0	-	27201101	27201101	8553170	6	12,104,182,87,68,145,	0,248,564,886,1711,2057,
#Partially deleted in new
chr2	27201411	27203116	chr2:27201411-27203116	0	-	27201411	27201411	8553170	4	42,182,87,304,	0,254,576,1401,
#Partially deleted in new
chr2	27201711	27204672	chr2:27201711-27204672	0	-	27201711	27201711	8553170	6	136,87,68,113,89,212,	0,276,1101,1521,2067,2749,
#Partially deleted in new
chr2	27201783	27205081	chr2:27201783-27205081	0	-	27201783	27201783	8553170	7	64,87,68,113,89,130,291,	0,204,1029,1449,1995,2677,3007,
#Partially deleted in new
chr2	27205134	27206319	chr2:27205134-27206319	0	-	27205134	27205134	8553170	2	370,294,	0,891,
#Partially deleted in new
chr2	27205406	27211938	chr2:27205406-27211938	0	-	27206090	27207650	789624	6	98,68,66,533,67,39,	0,619,1470,1851,6060,6493,
#Partially deleted in new
chr2	27206025	27212030	chr2:27206025-27212030	0	-	27206025	27207650	789624	6	68,52,66,533,67,131,	0,457,851,1232,5441,5874,
#Partially deleted in new
chr2	27206893	27211793	chr2:27206893-27211793	0	-	27206893	27207650	789624	4	49,533,67,83,	0,364,4573,4817,
#Partially deleted in new
chr2	27206936	27212950	chr2:27206936-27212950	0	-	27206936	27207650	789624	4	6,533,67,119,	0,321,4530,5895,
#Partially deleted in new
chr2	27207303	27211888	chr2:27207303-27211888	0	-	27207303	27207650	789624	3	487,67,122,	0,4163,4463,
#Partially deleted in new
chr2	27207414	27212262	chr2:27207414-27212262	0	-	27207414	27207650	789624	4	376,55,67,243,	0,979,4052,4605,
#Partially deleted in new
chr2	27207474	27212522	chr2:27207474-27212522	0	-	27207474	27207650	789624	4	316,67,127,60,	0,3992,4545,4988,
#Partially deleted in new
chr2	27207534	27212777	chr2:27207534-27212777	0	-	27207534	27207650	789624	4	256,67,127,149,	0,3932,4485,5094,
#Partially deleted in new
chr2	27207569	27212958	chr2:27207569-27212958	0	-	27207569	27207650	789624	4	221,67,127,127,	0,3897,4450,5262,
#Partially deleted in new
chr2	27212026	27217156	chr2:27212026-27217156	1	+	27212203	27216948	789624	7	441,122,72,72,122,98,313,	0,1150,3294,3447,3605,4496,4817,
#Partially deleted in new
chr2	27212030	27217176	chr2:27212030-27217176	3	+	27212203	27216948	789624	7	437,122,72,72,122,98,333,	0,1146,3290,3443,3601,4492,4813,
#Deleted in new
chr2	27212176	27213433	chr2:27212176-27213433	0	+	27212176	27212176	8553170	2	291,257,	0,1000,
#Partially deleted in new
chr2	27212310	27217156	chr2:27212310-27217156	1	+	27212368	27216948	789624	7	157,122,72,72,122,98,313,	0,866,3010,3163,3321,4212,4533,
#Partially deleted in new
chr2	27212369	27217178	chr2:27212369-27217178	1	+	27213251	27216948	789624	7	238,122,72,72,122,98,335,	0,807,2951,3104,3262,4153,4474,
#Partially deleted in new
chr2	27212865	27215666	chr2:27212865-27215666	0	+	27213251	27215666	789624	4	433,72,72,35,	0,2455,2608,2766,
#Partially deleted in new
chr2	27213194	27215414	chr2:27213194-27215414	0	+	27213194	27213194	8553170	2	104,94,	0,2126,
#Duplicated in new
chr2	27216373	27217157	chr2:27216373-27217157	0	+	27216373	27216373	8553170	2	247,314,	0,470,
#Partially deleted in new
chr2	27217389	27243943	chr2:27217389-27243943	3	+	27217551	27243518	0	44	244,140,130,143,142,172,186,113,146,132,234,222,189,125,131,113,245,247,99,225,183,219,168,183,105,240,82,167,165,132,202,191,141,102,97,45,170,75,213,126,156,102,95,528,	0,487,3828,4804,5129,5476,6173,6527,6955,7355,7620,8315,8741,9135,9442,14078,14590,15058,15652,15922,16236,16618,17128,17855,18146,18894,19359,19989,20328,20666,21041,21652,21941,22307,22875,23521,23668,23932,24521,24912,25230,25482,25808,26026,
#Partially deleted in new
chr2	27217407	27243785	chr2:27217407-27243785	1	+	27217551	27243518	789624	43	226,140,130,143,142,172,186,113,146,132,234,222,125,131,113,245,247,99,225,183,219,168,183,105,240,82,167,165,132,202,191,141,102,97,45,170,75,213,126,156,102,95,370,	0,469,3810,4786,5111,5458,6155,6509,6937,7337,7602,8297,9117,9424,14060,14572,15040,15634,15904,16218,16600,17110,17837,18128,18876,19341,19971,20310,20648,21023,21634,21923,22289,22857,23503,23650,23914,24503,24894,25212,25464,25790,26008,
#Partially deleted in new
chr2	27226223	27231572	chr2:27226223-27231572	0	+	27226223	27226223	8553170	3	426,131,105,	0,608,5244,
#Partially deleted in new
chr2	27227500	27232643	chr2:27227500-27232643	0	+	27227500	27227500	8553170	4	35,113,245,196,	0,3967,4479,4947,
#Deleted in new
chr2	27233078	27234135	chr2:27233078-27234135	0	+	27233078	27233078	8553170	3	62,497,128,	0,233,929,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	27234595	27235876	chr2:27234595-27235876	0	+	27234595	27234595	8553170	3	90,183,341,	0,649,940,
#Partially deleted in new
chr2	27235632	27238178	chr2:27235632-27238178	0	+	27235632	27238178	789624	6	8,240,103,167,165,123,	0,651,1095,1746,2085,2423,
#Partially deleted in new
chr2	27239117	27241951	chr2:27239117-27241951	0	+	27239117	27241951	789624	9	115,141,102,97,51,45,170,75,41,	0,213,579,1147,1449,1793,1940,2204,2793,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	27239151	27240222	chr2:27239151-27240222	0	+	27239151	27239151	8553170	3	81,141,526,	0,179,545,
#Deleted in new
chr2	27241920	27243590	chr2:27241920-27243590	0	+	27241920	27243518	789624	5	203,126,354,95,175,	0,381,699,1277,1495,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	27253683	27258583	chr2:27253683-27258583	0	-	27253683	27253683	8553170	4	1777,135,106,1430,	0,2702,3104,3470,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	27253846	27257820	chr2:27253846-27257820	0	-	27253846	27253846	8553170	3	2674,106,667,	0,2941,3307,
#Partially deleted in new
chr2	27254571	27263259	chr2:27254571-27263259	3	-	27255311	27262906	789624	8	889,135,106,199,154,147,182,448,	0,1814,2216,2582,3333,3589,4181,8240,
#Partially deleted in new
chr2	27255385	27262871	chr2:27255385-27262871	0	-	27255385	27262871	789624	7	75,135,106,199,147,182,60,	0,1000,1402,1768,2775,3367,7426,
#Partially deleted in new
chr2	27256803	27264136	chr2:27256803-27264136	0	-	27256803	27258882	789624	6	90,199,154,147,182,127,	0,350,1101,1357,1949,7206,
#Partially deleted in new
chr2	27257201	27275817	chr2:27257201-27275817	0	-	27257201	27275232	789624	6	151,154,147,182,75,288,	0,703,959,1551,17975,18328,
#Partially deleted in new
chr2	27257905	27275341	chr2:27257905-27275341	0	-	27257905	27263374	789624	6	153,147,182,114,73,165,	0,255,847,5440,6104,17271,
#Deleted in new
chr2	27257996	27259044	chr2:27257996-27259044	0	-	27257996	27257996	8553170	3	62,147,292,	0,164,756,
#Partially deleted in new
chr2	27258003	27262160	chr2:27258003-27262160	0	-	27258003	27258882	789624	4	55,147,171,167,	0,157,749,3990,
#Partially deleted in new
chr2	27258039	27275345	chr2:27258039-27275345	0	-	27258039	27258882	789624	5	19,147,182,73,169,	0,121,713,5970,17137,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	27275420	27281430	chr2:27275420-27281430	3	+	27276728	27280215	789624	7	133,282,116,262,145,68,1002,	0,685,1305,2333,2767,4745,5008,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	27275432	27278261	chr2:27275432-27278261	0	+	27276728	27278261	789624	4	121,282,116,74,	0,673,1293,2755,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	27275462	27281430	chr2:27275462-27281430	1	+	27276728	27280215	789624	7	109,202,116,262,145,68,1002,	0,723,1263,2291,2725,4703,4966,
#Partially deleted in new
chr2	27275474	27281430	chr2:27275474-27281430	1	+	27276728	27280215	789624	6	79,139,214,145,68,1002,	0,1228,2327,2713,4691,4954,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	27275474	27281499	chr2:27275474-27281499	1	+	27276728	27280222	789624	5	79,199,145,68,1071,	0,1168,2713,4691,4954,
#Partially deleted in new
chr2	27277931	27280717	chr2:27277931-27280717	0	+	27277931	27277931	8553170	3	401,68,289,	0,2234,2497,
#Partially deleted in new
chr2	27282391	27307435	chr2:27282391-27307435	3	+	27282731	27306541	0	9	508,173,172,96,234,23,125,87,549,	0,16175,16853,22567,23192,23688,23821,24064,24495,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	27282461	27307439	chr2:27282461-27307439	1	+	27282731	27306541	0	10	438,173,172,126,96,234,23,125,87,553,	0,16105,16783,17068,22497,23122,23618,23751,23994,24425,
#Deleted in new
chr2	27304690	27305779	chr2:27304690-27305779	0	+	27304690	27304690	8553170	2	364,196,	0,893,
#Partially deleted in new
chr2	27305184	27306261	chr2:27305184-27306261	0	+	27305184	27305184	8553170	3	633,23,49,	0,895,1028,
#Deleted in new
chr2	27307399	27308445	chr2:27307399-27308445	3	-	27307520	27307895	0	2	509,286,	0,760,
#Partially deleted in new
chr2	27309491	27322564	chr2:27309491-27322564	1	-	27309911	27322517	789624	7	490,53,33,96,93,116,117,	0,2407,2722,3002,3188,3502,12956,
#Partially deleted in new
chr2	27309491	27323054	chr2:27309491-27323054	1	-	27309876	27322517	789624	7	490,33,96,93,116,75,3,	0,2722,3002,3188,3502,12956,13560,
#Partially deleted in new
chr2	27309491	27312453	chr2:27309491-27312453	0	-	27309491	27309491	8553170	4	490,53,33,48,	0,2407,2722,2914,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	27309493	27325680	chr2:27309493-27325680	1	-	27309911	27324450	789624	6	488,53,33,96,93,1248,	0,2405,2720,3000,3186,14939,
#Partially deleted in new
chr2	27309493	27323102	chr2:27309493-27323102	3	-	27309911	27322517	789624	8	488,53,33,96,93,116,75,51,	0,2405,2720,3000,3186,3500,12954,13558,
#Partially deleted in new
chr2	27309529	27323081	chr2:27309529-27323081	1	-	27312533	27322517	789624	6	452,96,93,81,75,30,	0,2964,3150,3464,12918,13522,
#Partially deleted in new
chr2	27309539	27323083	chr2:27309539-27323083	0	-	27312533	27322517	789624	8	442,53,33,96,93,81,75,32,	0,2359,2674,2954,3140,3454,12908,13512,
#Partially deleted in new
chr2	27309645	27323063	chr2:27309645-27323063	1	-	27309911	27322517	789624	8	336,53,33,96,93,161,75,12,	0,2253,2568,2848,3034,3348,12802,13406,
#Partially deleted in new
chr2	27309706	27323102	chr2:27309706-27323102	1	-	27309911	27322517	789624	6	275,53,33,116,75,51,	0,2192,2507,3287,12741,13345,
#Partially deleted in new
chr2	27309794	27313109	chr2:27309794-27313109	0	-	27309911	27313109	789624	5	187,53,33,93,116,	0,2104,2419,2885,3199,
#Partially deleted in new
chr2	27309849	27323102	chr2:27309849-27323102	0	-	27309849	27309849	8553170	7	132,53,376,93,116,75,51,	0,2049,2364,2830,3144,12598,13202,
#Partially deleted in new
chr2	27309903	27323063	chr2:27309903-27323063	0	-	27312759	27322517	789624	8	78,53,33,96,93,157,75,12,	0,1995,2310,2590,2776,7174,12544,13148,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	27311072	27313387	chr2:27311072-27313387	0	-	27311072	27311072	8553170	1	2315,	0,
#Partially deleted in new
chr2	27311494	27323067	chr2:27311494-27323067	1	-	27311622	27322517	789624	8	183,53,33,96,93,116,75,16,	0,404,719,999,1185,1499,10953,11557,
#Partially deleted in new
chr2	27311929	27323072	chr2:27311929-27323072	0	-	27311929	27311929	8553170	5	660,93,116,75,21,	0,750,1064,10518,11122,
#Partially deleted in new
chr2	27311934	27323072	chr2:27311934-27323072	0	-	27311934	27313101	789624	9	17,33,96,93,116,28,96,75,21,	0,279,559,745,1059,4224,5143,10513,11117,
#Deleted in new
chr2	27312146	27312986	chr2:27312146-27312986	0	-	27312146	27312146	8553170	3	100,96,307,	0,347,533,
#Partially deleted in new
chr2	27312213	27323097	chr2:27312213-27323097	0	-	27312213	27312213	8553170	5	376,93,81,75,46,	0,466,780,10234,10838,
#Partially deleted in new
chr2	27312247	27323062	chr2:27312247-27323062	0	-	27312247	27312247	8553170	6	342,93,116,157,75,11,	0,432,746,4830,10200,10804,
#Deleted in new
chr2	27312299	27313156	chr2:27312299-27313156	0	-	27312299	27312299	8553170	3	290,93,163,	0,380,694,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	27315715	27323097	chr2:27315715-27323097	1	-	27316080	27322517	789624	4	471,157,75,46,	0,1362,6732,7336,
#Partially deleted in new
chr2	27316790	27323097	chr2:27316790-27323097	0	-	27316790	27316790	8553170	3	444,75,46,	0,5657,6261,
#Deleted in new
chr2	27321958	27323077	chr2:27321958-27323077	0	-	27321958	27321958	8553170	2	564,26,	0,1093,
#Partially deleted in new
chr2	27325848	27357034	chr2:27325848-27357034	3	-	27326674	27343554	789624	19	1045,108,153,129,88,162,145,130,26,109,112,228,99,78,95,286,322,271,296,	0,1328,2188,2619,2995,3272,3530,7806,8125,9749,10068,10349,11395,11632,12077,16099,16977,17459,30890,
#Partially deleted in new
chr2	27325848	27356492	chr2:27325848-27356492	1	-	27326674	27343554	789624	19	1045,108,153,129,88,162,145,130,26,109,112,228,99,78,95,286,322,271,406,	0,1328,2188,2619,2995,3272,3530,7806,8125,9749,10068,10349,11395,11632,12077,16099,16977,17459,30238,
#Partially deleted in new
chr2	27325853	27328850	chr2:27325853-27328850	0	-	27326188	27328850	789624	5	365,108,153,129,7,	0,1323,2183,2614,2990,
#Partially deleted in new
chr2	27326292	27328089	chr2:27326292-27328089	0	-	27326645	27328089	789624	3	431,108,53,	0,884,1744,
#Partially deleted in new
chr2	27326391	27328490	chr2:27326391-27328490	0	-	27326391	27326391	8553170	3	502,108,454,	0,785,1645,
#Partially deleted in new
chr2	27326496	27335428	chr2:27326496-27335428	0	-	27326674	27335428	789624	10	397,108,153,129,88,162,145,130,26,102,	0,680,1540,1971,2347,2624,2882,7158,7477,8830,
#Partially deleted in new
chr2	27327181	27329460	chr2:27327181-27329460	0	-	27328167	27329460	789624	6	103,152,192,88,162,82,	0,855,1223,1662,1939,2197,
#Deleted in new
chr2	27328320	27328931	chr2:27328320-27328931	0	-	27328320	27328320	8553170	2	276,88,	0,523,
#Partially deleted in new
chr2	27333604	27343632	chr2:27333604-27343632	1	-	27333629	27343554	789624	12	43,135,26,109,112,228,99,78,95,286,322,325,	0,45,369,1993,2312,2593,3639,3876,4321,8343,9221,9703,
#Partially deleted in new
chr2	27335534	27337323	chr2:27335534-27337323	0	+	27335534	27335534	8553170	3	186,255,113,	0,681,1676,
#Partially deleted in new
chr2	27335541	27337825	chr2:27335541-27337825	1	+	27335541	27335541	789624	4	179,179,116,389,	0,750,1669,1895,
#Partially deleted in new
chr2	27335627	27337308	chr2:27335627-27337308	0	-	27335627	27335627	8553170	3	79,509,65,	0,289,1616,
#Partially deleted in new
chr2	27335776	27337444	chr2:27335776-27337444	0	+	27335776	27335776	8553170	4	312,255,116,8,	0,439,1434,1660,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	27335935	27336767	chr2:27335935-27336767	0	-	27335935	27335935	8553170	2	93,570,	0,262,
#Partially deleted in new
chr2	27335944	27337459	chr2:27335944-27337459	2	+	27335944	27335944	8553170	3	526,116,23,	0,1266,1492,
#Partially deleted in new
chr2	27336332	27338259	chr2:27336332-27338259	0	-	27336332	27336332	8553170	4	93,99,78,334,	0,911,1148,1593,
#Partially deleted in new
chr2	27337210	27342599	chr2:27337210-27342599	0	+	27337210	27337210	8553170	2	116,557,	0,4832,
#Deleted in new
chr2	27337222	27337800	chr2:27337222-27337800	0	+	27337222	27337222	8553170	2	104,318,	0,260,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	27337222	27340008	chr2:27337222-27340008	0	+	27337222	27337222	8553170	2	104,425,	0,2361,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	27337222	27340824	chr2:27337222-27340824	0	+	27337222	27337222	8553170	4	104,222,104,177,	0,2361,3047,3425,
#Partially deleted in new
chr2	27337222	27340237	chr2:27337222-27340237	0	+	27337222	27337222	8553170	2	104,150,	0,2865,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	27337222	27341764	chr2:27337222-27341764	0	+	27337222	27337222	8553170	3	104,108,325,	0,3043,4217,
#Deleted in new
chr2	27337222	27337784	chr2:27337222-27337784	0	+	27337222	27337222	8553170	2	104,374,	0,188,
#Partially deleted in new
chr2	27337222	27342564	chr2:27337222-27342564	0	+	27337222	27337222	8553170	2	104,622,	0,4720,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	27337272	27342599	chr2:27337272-27342599	0	+	27337272	27337272	8553170	3	54,108,557,	0,2993,4770,
#Partially deleted in new
chr2	27342990	27356767	chr2:27342990-27356767	0	-	27342990	27343554	789624	4	157,271,100,29,	0,317,13096,13748,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	27343330	27356999	chr2:27343330-27356999	0	-	27343330	27343554	789624	3	248,319,261,	0,6983,13408,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	27356245	27360256	chr2:27356245-27360256	1	+	27356245	27356245	8553170	2	611,2449,	0,1562,
#Partially deleted in new
chr2	27357139	27358190	chr2:27357139-27358190	0	+	27357139	27357139	8553170	2	153,383,	0,668,
#Partially deleted in new
chr2	27357187	27367622	chr2:27357187-27367622	3	+	27357187	27357187	8553170	3	105,95,199,	0,620,10236,
#Partially deleted in new
chr2	27364351	27370486	chr2:27364351-27370486	3	-	27364399	27370314	0	13	248,181,178,128,103,77,115,92,80,207,136,44,203,	0,366,2407,2722,3105,3394,3673,4020,4302,4654,5062,5524,5932,
#Partially deleted in new
chr2	27364351	27370457	chr2:27364351-27370457	1	-	27364399	27370314	789624	14	248,181,178,128,103,77,115,92,80,204,132,16,26,174,	0,366,2407,2722,3105,3394,3673,4020,4302,4654,5062,5524,5542,5932,
#Deleted in new
chr2	27364357	27365082	chr2:27364357-27365082	0	-	27364357	27364357	8553170	2	242,365,	0,360,
#Partially deleted in new
chr2	27364362	27370300	chr2:27364362-27370300	1	-	27367793	27369905	789624	14	237,181,178,128,103,57,18,115,92,80,207,136,44,195,	0,355,2396,2711,3094,3383,3442,3662,4009,4291,4643,5051,5513,5743,
#Partially deleted in new
chr2	27364376	27370315	chr2:27364376-27370315	0	-	27367793	27370314	789624	13	223,181,178,128,103,77,89,92,80,207,136,44,32,	0,341,2382,2697,3080,3369,3648,3995,4277,4629,5037,5499,5907,
#Partially deleted in new
chr2	27364380	27370334	chr2:27364380-27370334	1	-	27364399	27370314	0	13	219,181,178,128,103,77,115,92,80,204,136,44,51,	0,337,2378,2693,3076,3365,3644,3991,4273,4625,5033,5495,5903,
#Partially deleted in new
chr2	27364398	27370013	chr2:27364398-27370013	1	-	27364399	27370013	0	12	201,181,178,128,103,77,115,92,80,204,136,138,	0,319,2360,2675,3058,3347,3626,3973,4255,4607,5015,5477,
#Partially deleted in new
chr2	27364398	27370326	chr2:27364398-27370326	1	-	27364399	27370013	789624	12	201,181,178,128,103,77,115,92,80,207,136,451,	0,319,2360,2675,3058,3347,3626,3973,4255,4607,5015,5477,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	27365557	27370323	chr2:27365557-27370323	0	-	27365557	27365557	8553170	3	3176,207,910,	0,3448,3856,
#Deleted in new
chr2	27366762	27368727	chr2:27366762-27368727	0	-	27367172	27368727	789624	7	174,126,103,77,115,92,74,	0,407,694,983,1262,1609,1891,
#Deleted in new
chr2	27368412	27370329	chr2:27368412-27370329	0	-	27370275	27370314	789624	6	51,80,207,136,44,224,	0,241,593,1001,1463,1693,
#Deleted in new
chr2	27368669	27370326	chr2:27368669-27370326	0	-	27368669	27368669	8553170	3	540,506,43,	0,744,1614,
#Partially deleted in new
chr2	27370495	27377533	chr2:27370495-27377533	1	+	27370743	27376719	0	14	311,118,65,111,91,88,70,93,204,126,78,75,42,928,	0,2127,2751,3365,3589,3850,4193,4565,5010,5350,5610,5817,5983,6110,
#Partially deleted in new
chr2	27370521	27377128	chr2:27370521-27377128	3	+	27370743	27376719	0	15	285,75,118,65,111,91,88,70,93,204,126,78,75,42,523,	0,747,2101,2725,3339,3563,3824,4167,4539,4984,5324,5584,5791,5957,6084,
#Deleted in new
chr2	27370614	27371644	chr2:27370614-27371644	0	+	27370614	27370614	8553170	2	192,376,	0,654,
#Partially deleted in new
chr2	27370616	27377127	chr2:27370616-27377127	0	+	27370743	27371367	789624	14	190,200,65,111,91,88,70,93,204,126,78,75,42,522,	0,652,2630,3244,3468,3729,4072,4444,4889,5229,5489,5696,5862,5989,
#Partially deleted in new
chr2	27370619	27375521	chr2:27370619-27375521	0	+	27370619	27370619	8553170	8	187,75,65,111,349,70,93,16,	0,649,2627,3241,3465,4069,4441,4886,
#Partially deleted in new
chr2	27370627	27377123	chr2:27370627-27377123	0	+	27370743	27373047	789624	16	179,75,118,74,65,111,91,88,70,93,204,126,78,75,42,518,	0,641,1995,2412,2619,3233,3457,3718,4061,4433,4878,5218,5478,5685,5851,5978,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	27370643	27373439	chr2:27370643-27373439	0	+	27370643	27370643	8553170	4	163,75,118,193,	0,625,1979,2603,
#Partially deleted in new
chr2	27370645	27373129	chr2:27370645-27373129	0	+	27370645	27370645	8553170	3	161,75,507,	0,623,1977,
#Partially deleted in new
chr2	27370664	27377128	chr2:27370664-27377128	0	+	27370743	27373942	789624	12	142,65,111,91,88,93,204,126,78,75,42,523,	0,2582,3196,3420,3681,4396,4841,5181,5441,5648,5814,5941,
#Partially deleted in new
chr2	27374407	27375597	chr2:27374407-27375597	0	+	27374407	27374407	8553170	3	26,465,92,	0,281,1098,
#Deleted in new
chr2	27377230	27380725	chr2:27377230-27380725	3	-	27377544	27380526	789624	4	1141,588,156,254,	0,1236,2862,3241,
#Deleted in new
chr2	27377234	27380444	chr2:27377234-27380444	1	-	27377544	27380117	789624	3	1137,588,352,	0,1232,2858,
#Deleted in new
chr2	27377723	27378993	chr2:27377723-27378993	0	-	27377723	27377723	8553170	3	307,149,110,	0,743,1160,
#Deleted in new
chr2	27378730	27380790	chr2:27378730-27380790	0	-	27378730	27380117	789624	3	324,156,30,	0,1362,2030,
#Partially deleted in new
chr2	27381193	27409687	chr2:27381193-27409687	3	-	27381598	27409422	789624	10	612,103,130,235,141,416,133,86,70,385,	0,932,1282,2172,2758,3479,4553,5000,5895,28109,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	27381194	27409555	chr2:27381194-27409555	0	-	27381194	27381194	8553170	8	611,103,130,235,141,95,2184,253,	0,931,1281,2171,2757,3478,3780,28108,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	27386595	27409575	chr2:27386595-27409575	0	-	27386595	27386595	8553170	2	563,273,	0,22707,
#Partially deleted in new
chr2	27392783	27393367	chr2:27392783-27393367	7	-	27392783	27392783	16724991	1	584,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr2	27427789	27442259	chr2:27427789-27442259	3	+	27433273	27441812	789624	19	393,414,235,123,102,90,41,95,84,59,99,133,106,51,136,54,64,56,552,	0,528,5459,5883,6199,6681,6932,7343,8963,9257,9472,11976,12613,12862,13015,13337,13477,13777,13918,
#Partially deleted in new
chr2	27428639	27442255	chr2:27428639-27442255	1	+	27433273	27441812	789624	18	92,230,123,102,90,41,95,84,59,99,133,106,51,136,54,64,56,548,	0,4614,5033,5349,5831,6082,6493,8113,8407,8622,11126,11763,12012,12165,12487,12627,12927,13068,
#Partially deleted in new
chr2	27428652	27442255	chr2:27428652-27442255	1	+	27433273	27441812	789624	19	79,230,123,102,90,41,95,24,84,59,99,133,106,51,136,54,64,56,548,	0,4601,5020,5336,5818,6069,6480,7070,8100,8394,8609,11113,11750,11999,12152,12474,12614,12914,13055,
#Partially deleted in new
chr2	27429182	27434500	chr2:27429182-27434500	0	+	27433273	27434500	789624	5	184,235,123,102,30,	0,4066,4490,4806,5288,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	27431676	27433707	chr2:27431676-27433707	0	+	27433273	27433707	789624	3	315,235,35,	0,1572,1996,
#Deleted in new
chr2	27434044	27435169	chr2:27434044-27435169	0	+	27434044	27434044	8553170	3	46,90,448,	0,426,677,
#Deleted in new
chr2	27434470	27436011	chr2:27434470-27436011	0	+	27434470	27434470	8553170	4	90,41,95,289,	0,251,662,1252,
#Partially deleted in new
chr2	27435581	27442255	chr2:27435581-27442255	0	+	27435581	27435581	8553170	11	1255,59,99,133,106,51,136,54,64,56,548,	0,1465,1680,4184,4821,5070,5223,5545,5685,5985,6126,
#Deleted in new
chr2	27440314	27441501	chr2:27440314-27441501	0	+	27440314	27440314	8553170	4	388,136,54,235,	0,490,812,952,
#Partially deleted in new
chr2	27442365	27446481	chr2:27442365-27446481	3	+	27442412	27444056	789624	7	75,185,60,207,135,113,181,	0,213,476,708,1032,1583,3935,
#Partially deleted in new
chr2	27442380	27444297	chr2:27442380-27444297	1	+	27442412	27444056	789624	7	60,185,60,207,135,113,112,	0,198,461,693,1017,1568,1805,
#Partially deleted in new
chr2	27442397	27444295	chr2:27442397-27444295	0	+	27442412	27443192	789624	6	43,60,207,135,113,107,	0,444,676,1000,1551,1791,
#Partially deleted in new
chr2	27442445	27444297	chr2:27442445-27444297	1	+	27442604	27444056	789624	6	318,60,207,135,113,109,	0,396,628,952,1503,1743,
#Partially deleted in new
chr2	27442744	27444297	chr2:27442744-27444297	0	+	27442744	27442744	8553170	5	157,207,135,113,112,	0,329,653,1204,1441,
#Partially deleted in new
chr2	27443253	27444291	chr2:27443253-27444291	0	+	27443253	27443253	8553170	3	27,135,343,	0,144,695,
#Partially deleted in new
chr2	27443451	27446479	chr2:27443451-27446479	0	+	27443451	27444056	789624	3	81,113,179,	0,497,2849,
#Partially deleted in new
chr2	27444370	27489757	chr2:27444370-27489757	3	-	27444431	27489653	789624	48	151,92,154,99,60,96,120,111,117,87,64,110,99,130,110,181,65,94,143,117,136,98,90,145,121,79,249,78,93,85,108,137,168,113,86,104,54,162,96,124,215,88,80,66,40,113,144,143,	0,643,925,1374,1558,1889,3144,3441,4544,4923,5128,5320,5627,9013,9259,9611,9983,10196,12140,13268,13470,13755,14408,15007,15338,16644,16898,17388,18330,18726,21040,21375,26557,27879,32270,32846,33188,33624,35138,35655,36675,38918,39209,39501,39856,40647,40989,45244,
#Partially deleted in new
chr2	27444376	27454087	chr2:27444376-27454087	0	-	27447618	27454087	789624	16	145,92,154,99,60,96,143,111,117,87,64,110,99,130,110,106,	0,637,919,1368,1552,1883,3138,3435,4538,4917,5122,5314,5621,9007,9253,9605,
#Partially deleted in new
chr2	27444397	27489701	chr2:27444397-27489701	0	-	27444397	27444397	8553170	48	124,92,154,99,60,96,120,111,117,87,64,110,99,130,110,181,65,94,143,117,383,90,145,121,79,249,78,93,85,108,137,168,113,86,104,54,162,96,124,215,88,80,66,40,113,144,84,87,	0,616,898,1347,1531,1862,3117,3414,4517,4896,5101,5293,5600,8986,9232,9584,9956,10169,12113,13241,13443,14381,14980,15311,16617,16871,17361,18303,18699,21013,21348,26530,27852,32243,32819,33161,33597,35111,35628,36648,38891,39182,39474,39829,40620,40962,41761,45217,
#Deleted in new
chr2	27445019	27446196	chr2:27445019-27446196	0	-	27445019	27445019	8553170	4	86,154,99,268,	0,276,725,909,
#Deleted in new
chr2	27445306	27446205	chr2:27445306-27446205	0	-	27445306	27445306	8553170	2	143,277,	0,622,
#Partially deleted in new
chr2	27445443	27447922	chr2:27445443-27447922	0	-	27445626	27447922	789624	7	6,77,99,60,96,120,111,	0,109,301,485,816,2071,2368,
#Partially deleted in new
chr2	27445940	27447576	chr2:27445940-27447576	0	-	27445940	27445940	8553170	2	415,62,	0,1574,
#Partially deleted in new
chr2	27448914	27454134	chr2:27448914-27454134	0	-	27450088	27454134	789624	7	117,87,64,110,99,130,153,	0,379,584,776,1083,4469,5067,
#Deleted in new
chr2	27453136	27454636	chr2:27453136-27454636	0	-	27453237	27454636	789624	6	134,130,110,181,65,70,	0,247,493,845,1217,1430,
#Deleted in new
chr2	27453137	27453768	chr2:27453137-27453768	0	-	27453137	27453137	8553170	3	133,130,139,	0,246,492,
#Partially deleted in new
chr2	27455155	27455862	chr2:27455155-27455862	7	+	27455155	27455155	16724991	2	268,129,	0,578,
#Deleted in new
chr2	27457892	27459113	chr2:27457892-27459113	0	-	27457892	27457892	8553170	3	84,98,335,	0,233,886,
#Deleted in new
chr2	27465201	27466081	chr2:27465201-27466081	0	-	27465201	27465201	8553170	2	317,336,	0,544,
#Deleted in new
chr2	27470780	27471277	chr2:27470780-27471277	0	-	27470780	27470780	8553170	2	315,45,	0,452,
#Partially deleted in new
chr2	27470812	27489678	chr2:27470812-27489678	0	-	27470812	27470812	8553170	16	283,113,86,104,54,162,96,124,215,88,80,66,40,113,144,64,	0,1437,5828,6404,6746,7182,8696,9213,10233,12476,12767,13059,13414,14205,14547,18802,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	27471686	27489773	chr2:27471686-27489773	1	-	27472174	27489653	789624	15	676,86,104,54,162,96,124,215,88,80,66,40,113,144,159,	0,4954,5530,5872,6308,7822,8339,9359,11602,11893,12185,12540,13331,13673,17928,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	27472011	27489789	chr2:27472011-27489789	1	-	27472174	27485479	789624	16	351,86,104,54,162,96,124,215,88,80,66,40,113,144,84,175,	0,4629,5205,5547,5983,7497,8014,9034,11277,11568,11860,12215,13006,13348,14147,17603,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	27472342	27489733	chr2:27472342-27489733	0	-	27472342	27472342	8553170	14	20,680,54,162,96,124,81,88,80,66,40,113,144,119,	0,4298,5216,5652,7166,7683,8703,10946,11237,11529,11884,12675,13017,17272,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	27475493	27475595	chr2:27475493-27475595	3	-	27475493	27475493	8553170	1	102,	0,
#Partially deleted in new
chr2	27483882	27489754	chr2:27483882-27489754	0	-	27483882	27483882	8553170	4	384,113,144,140,	0,1135,1477,5732,
#Partially deleted in new
chr2	27491882	27495245	chr2:27491882-27495245	3	-	27492442	27494679	789624	7	596,125,90,205,116,157,368,	0,783,1506,2047,2468,2664,2995,
#Partially deleted in new
chr2	27491900	27495162	chr2:27491900-27495162	0	-	27491900	27491900	8553170	5	578,90,537,157,285,	0,1488,2029,2646,2977,
#Partially deleted in new
chr2	27492712	27494812	chr2:27492712-27494812	0	-	27492712	27492712	8553170	5	78,90,205,116,266,	0,676,1217,1638,1834,
#Partially deleted in new
chr2	27496841	27523684	chr2:27496841-27523684	3	+	27496904	27523439	789624	19	123,156,69,69,74,67,54,95,106,119,99,98,77,97,98,84,150,135,416,	0,402,720,1413,1882,2300,2555,4293,6672,8876,9639,9946,10393,10839,11135,11326,21946,25618,26427,
#Partially deleted in new
chr2	27496847	27501163	chr2:27496847-27501163	0	+	27496904	27499421	789624	7	117,156,69,69,74,54,29,	0,396,714,1407,1876,2549,4287,
#Partially deleted in new
chr2	27496882	27506891	chr2:27496882-27506891	0	+	27496882	27496882	8553170	11	82,156,69,69,74,67,54,95,106,119,411,	0,361,679,1372,1841,2259,2514,4252,6631,8835,9598,
#Partially deleted in new
chr2	27497267	27501830	chr2:27497267-27501830	0	+	27497267	27501813	789624	8	132,69,69,74,67,54,95,141,	0,294,987,1456,1874,2129,3867,4422,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	27506509	27509791	chr2:27506509-27509791	0	+	27506509	27509571	789624	7	70,98,77,97,98,84,265,	0,278,725,1171,1467,1658,3017,
#Deleted in new
chr2	27507340	27508211	chr2:27507340-27508211	0	+	27507340	27507340	8553170	3	437,98,44,	0,636,827,
#Partially deleted in new
chr2	27537385	27582720	chr2:27537385-27582720	3	+	27537426	27582527	789624	5	185,79,55,96,15986,	0,27951,28658,28903,29349,
#Deleted in new
chr2	27576521	27582721	chr2:27576521-27582721	1	+	27576572	27582527	789624	1	6200,	0,
#Partially deleted in new
chr2	27582968	27623215	chr2:27582968-27623215	1	+	27598208	27621461	0	15	174,101,59,188,96,84,125,87,99,168,195,102,63,99,2063,	0,457,689,15098,16614,17001,17722,18387,19494,20171,24876,32199,33293,34504,38184,
#Partially deleted in new
chr2	27582968	27623215	chr2:27582968-27623215	1	+	27583112	27621461	0	13	174,59,185,96,125,87,99,168,195,102,63,99,2063,	0,689,15101,16614,17722,18387,19494,20171,24876,32199,33293,34504,38184,
#Partially deleted in new
chr2	27582968	27623215	chr2:27582968-27623215	1	+	27598208	27621461	0	13	174,188,96,84,125,87,99,168,195,102,63,99,2063,	0,15098,16614,17001,17722,18387,19494,20171,24876,32199,33293,34504,38184,
#Partially deleted in new
chr2	27583029	27623215	chr2:27583029-27623215	3	+	27583112	27621461	0	14	113,59,188,96,84,125,87,99,168,195,102,63,99,2063,	0,628,15037,16553,16940,17661,18326,19433,20110,24815,32138,33232,34443,38123,
#Partially deleted in new
chr2	27583029	27623094	chr2:27583029-27623094	1	+	27583112	27621461	789624	14	113,59,185,96,84,125,87,99,168,195,102,63,99,1942,	0,628,15040,16553,16940,17661,18326,19433,20110,24815,32138,33232,34443,38123,
#Partially deleted in new
chr2	27583043	27600728	chr2:27583043-27600728	0	+	27583043	27583043	8553170	5	99,188,96,84,38,	0,15023,16539,16926,17647,
#Partially deleted in new
chr2	27583045	27635174	chr2:27583045-27635174	3	+	27583045	27583045	8553170	18	97,188,96,84,87,99,168,195,102,63,99,110,94,40,67,38,79,35,	0,15021,16537,16924,18310,19417,20094,24799,32122,33216,34427,38107,46813,47981,48788,49587,51800,52094,
#Partially deleted in new
chr2	27583283	27598187	chr2:27583283-27598187	0	+	27583283	27583283	8553170	2	433,121,	0,14783,
#Partially deleted in new
chr2	27617050	27623096	chr2:27617050-27623096	0	+	27617050	27617050	8553170	2	521,1944,	0,4102,
#Partially deleted in new
chr2	27625638	27629012	chr2:27625638-27629012	3	-	27626962	27627799	789624	2	2279,63,	0,3311,
#Partially deleted in new
chr2	27626928	27628878	chr2:27626928-27628878	1	-	27626962	27628763	789624	2	989,483,	0,1467,
#Partially deleted in new
chr2	27627859	27628891	chr2:27627859-27628891	0	-	27627859	27628763	789624	2	58,502,	0,530,
#Deleted in new
chr2	27628246	27629927	chr2:27628246-27629927	0	+	27628246	27628246	8553170	2	468,69,	0,1612,
#Partially deleted in new
chr2	27628246	27650363	chr2:27628246-27650363	1	+	27631058	27650200	789624	14	479,84,40,67,38,79,95,46,147,83,40,91,108,249,	0,1622,2780,3587,4386,6599,6893,9963,10638,11796,12993,14182,19589,21868,
#Partially deleted in new
chr2	27628647	27650844	chr2:27628647-27650844	1	+	27631058	27650200	789624	14	67,94,40,67,38,79,95,46,147,83,40,91,108,730,	0,1211,2379,3186,3985,6198,6492,9562,10237,11395,12592,13781,19188,21467,
#Partially deleted in new
chr2	27628647	27650844	chr2:27628647-27650844	1	+	27629925	27650200	789624	12	67,94,38,79,95,46,147,83,40,91,108,730,	0,1211,3985,6198,6492,9562,10237,11395,12592,13781,19188,21467,
#Partially deleted in new
chr2	27628647	27650209	chr2:27628647-27650209	1	+	27629925	27650200	789624	12	78,84,38,79,95,46,147,83,40,91,108,95,	0,1221,3985,6198,6492,9562,10237,11395,12592,13781,19188,21467,
#Partially deleted in new
chr2	27628657	27650456	chr2:27628657-27650456	3	+	27628707	27650200	789624	15	57,68,94,40,67,38,79,95,46,147,83,40,91,108,342,	0,717,1201,2369,3176,3975,6188,6482,9552,10227,11385,12582,13771,19178,21457,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	27628995	27651508	chr2:27628995-27651508	1	+	27629016	27650200	789624	14	174,94,40,67,38,79,95,46,147,83,40,91,108,1394,	0,863,2031,2838,3637,5850,6144,9214,9889,11047,12244,13433,18840,21119,
#Partially deleted in new
chr2	27628995	27650844	chr2:27628995-27650844	1	+	27629016	27650200	789624	14	174,94,40,67,38,79,95,46,147,83,40,91,108,730,	0,863,2031,2838,3637,5850,6144,9214,9889,11047,12244,13433,18840,21119,
#Partially deleted in new
chr2	27629023	27638963	chr2:27629023-27638963	0	+	27629058	27632649	789624	7	146,94,38,79,95,46,79,	0,835,3609,5822,6116,9186,9861,
#Partially deleted in new
chr2	27629051	27631640	chr2:27629051-27631640	0	+	27629051	27629051	8553170	3	118,94,614,	0,807,1975,
#Partially deleted in new
chr2	27629051	27650846	chr2:27629051-27650846	1	+	27629058	27650200	789624	14	118,94,40,67,38,79,95,46,147,83,40,91,108,732,	0,807,1975,2782,3581,5794,6088,9158,9833,10991,12188,13377,18784,21063,
#Partially deleted in new
chr2	27629245	27647894	chr2:27629245-27647894	0	+	27629245	27629245	8553170	11	197,94,38,79,95,46,147,83,40,91,59,	0,613,3387,5600,5894,8964,9639,10797,11994,13183,18590,
#Deleted in new
chr2	27642042	27642169	chr2:27642042-27642169	3	-	27642042	27642042	8553170	1	127,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	27650811	27663809	chr2:27650811-27663809	3	-	27653484	27662192	789624	6	2936,238,325,405,103,481,	0,4553,6533,10172,11367,12517,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	27650811	27663840	chr2:27650811-27663840	1	-	27653484	27662192	789624	5	2936,238,325,103,512,	0,4553,6533,11367,12517,
#Partially deleted in new
chr2	27653051	27663640	chr2:27653051-27663640	1	-	27653484	27661396	789624	5	696,238,325,1298,312,	0,2313,4293,7932,10277,
#Partially deleted in new
chr2	27653062	27663639	chr2:27653062-27663639	1	-	27653484	27661396	789624	6	685,238,325,618,103,311,	0,2302,4282,7921,9116,10266,
#Partially deleted in new
chr2	27653069	27663639	chr2:27653069-27663639	1	-	27653484	27661396	789624	5	678,238,325,1298,125,	0,2295,4275,7914,10445,
#Partially deleted in new
chr2	27663470	27694969	chr2:27663470-27694969	1	+	27663752	27694683	0	14	1107,196,123,61,140,161,70,187,112,241,87,68,70,336,	0,1629,3797,5372,5777,12061,13824,14267,18777,21566,24463,25229,30214,31163,
#Partially deleted in new
chr2	27663470	27694976	chr2:27663470-27694976	3	+	27663752	27694683	0	14	1107,196,123,61,140,161,70,187,112,241,87,68,70,343,	0,1629,3797,5372,5777,12061,13824,14267,18777,21566,24463,25229,30214,31163,
#Partially deleted in new
chr2	27663888	27694972	chr2:27663888-27694972	1	+	27663914	27694683	789624	14	689,196,123,61,140,161,70,187,112,241,87,68,70,339,	0,1211,3379,4954,5359,11643,13406,13849,18359,21148,24045,24811,29796,30745,
#Partially deleted in new
chr2	27663914	27677297	chr2:27663914-27677297	0	+	27663914	27677297	789624	7	135,196,123,61,140,161,3,	0,1185,3353,4928,5333,11617,13380,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	27664466	27675692	chr2:27664466-27675692	0	+	27664466	27668680	789624	7	111,196,123,114,61,140,161,	0,633,2801,4170,4376,4781,11065,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	27691557	27694973	chr2:27691557-27694973	0	+	27691557	27691557	8553170	2	2197,340,	0,3076,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	27705785	27715732	chr2:27705785-27715732	3	-	27705785	27705785	789624	2	2711,149,	0,9798,
#Partially deleted in new
chr2	27771716	27779741	chr2:27771716-27779741	3	+	27771777	27779482	0	4	83,19,107,309,	0,957,2707,7716,
#Partially deleted in new
chr2	27771716	27779734	chr2:27771716-27779734	1	+	27771777	27779556	0	3	83,19,302,	0,957,7716,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	27771738	27988087	chr2:27771738-27988087	0	+	27771777	27894578	789624	6	61,19,123,152,77,95,	0,935,10833,122794,158093,216254,
#Deleted in new
chr2	27771743	27772855	chr2:27771743-27772855	0	+	27771743	27771743	8553170	2	56,182,	0,930,
#Partially deleted in new
chr2	27771974	27779731	chr2:27771974-27779731	0	+	27771974	27771974	8553170	3	411,19,299,	0,699,7458,
#Partially deleted in new
chr2	27772189	27779697	chr2:27772189-27779697	0	+	27772189	27772189	8553170	4	196,19,107,265,	0,484,2234,7243,
#Partially deleted in new
chr2	27781363	27891098	chr2:27781363-27891098	3	-	27781614	27890345	0	8	425,189,92,165,63,64,133,842,	0,46203,51322,61703,65678,66670,77075,108893,
#Partially deleted in new
chr2	27809686	27843161	chr2:27809686-27843161	0	-	27809979	27843161	789624	4	359,189,92,95,	0,17880,22999,33380,
#Partially deleted in new
chr2	27858500	27890681	chr2:27858500-27890681	0	-	27861524	27890345	789624	3	71,134,425,	0,2912,31756,
#Partially deleted in new
chr2	27889940	28025385	chr2:27889940-28025385	0	+	27894556	28025385	789624	6	324,66,152,77,95,160,	0,2442,4592,39891,98052,135285,
#Partially deleted in new
chr2	27890728	28338901	chr2:27890728-28338901	1	+	27894556	28327433	789624	13	114,152,77,95,195,75,110,100,71,83,154,174,452,	0,3804,39103,97264,134497,154996,238542,346473,350594,354051,407609,436545,447721,
#Partially deleted in new
chr2	27890749	28338901	chr2:27890749-28338901	3	+	27894556	28338513	789624	12	93,152,77,95,195,75,110,100,71,83,154,452,	0,3783,39082,97243,134476,154975,238521,346452,350573,354030,407588,447700,
#Partially deleted in new
chr2	27890762	27895068	chr2:27890762-27895068	0	+	27890762	27890762	8553170	2	80,536,	0,3770,
#Partially deleted in new
chr2	27890783	28025488	chr2:27890783-28025488	0	+	27890783	27890783	8553170	4	59,77,95,263,	0,39048,97209,134442,
#Partially deleted in new
chr2	27890786	27930361	chr2:27890786-27930361	0	+	27890786	27890786	8553170	3	56,152,530,	0,3746,39045,
#Partially deleted in new
chr2	27890791	28338901	chr2:27890791-28338901	1	+	27894556	28338513	789624	13	51,66,152,77,95,195,75,110,100,71,83,154,452,	0,1591,3741,39040,97201,134434,154933,238479,346410,350531,353988,407546,447658,
#Partially deleted in new
chr2	27890792	28338901	chr2:27890792-28338901	1	+	27894556	28310124	789624	13	50,152,77,95,195,75,110,100,71,83,154,72,452,	0,3740,39039,97200,134433,154932,238478,346409,350530,353987,407545,419289,447657,
#Partially deleted in new
chr2	27890792	28338901	chr2:27890792-28338901	1	+	27894556	28310124	789624	14	50,66,152,77,95,195,75,110,100,71,83,154,72,452,	0,1590,3740,39039,97200,134433,154932,238478,346409,350530,353987,407545,419289,447657,
#Partially deleted in new
chr2	27894544	28233315	chr2:27894544-28233315	0	+	27894556	28233315	789624	7	140,77,95,195,75,110,173,	0,35287,93448,130681,151180,234726,338598,
#Partially deleted in new
chr2	27894619	28025488	chr2:27894619-28025488	0	+	27894619	28025488	789624	4	65,77,95,263,	0,35212,93373,130606,
#Deleted in new
chr2	27896115	27897195	chr2:27896115-27897195	7	-	27896115	27896115	16724991	1	1080,	0,
#Partially deleted in new
chr2	27996366	27996449	chr2:27996366-27996449	3	+	27996366	27996366	5263520	1	83,	0,
#Deleted in new
chr2	28015776	28016482	chr2:28015776-28016482	7	-	28015776	28015776	16724991	1	706,	0,
#Deleted in new
chr2	28134407	28134585	chr2:28134407-28134585	3	-	28134407	28134407	8553170	1	178,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	28307690	28310459	chr2:28307690-28310459	3	-	28307690	28307690	789624	3	1884,43,183,	0,2246,2586,
#Deleted in new
chr2	28308160	28308570	chr2:28308160-28308570	7	+	28308160	28308160	16724991	1	410,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	28384408	28394672	chr2:28384408-28394672	0	-	28384408	28384408	789624	2	2725,125,	0,10139,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	28384408	28394672	chr2:28384408-28394672	3	-	28384408	28384408	8553170	3	2725,151,125,	0,3352,10139,
#Partially deleted in new
chr2	28392447	28408802	chr2:28392447-28408802	0	+	28392447	28392447	8553170	3	97,252,44,	0,11659,16311,
#Partially deleted in new
chr2	28392801	28417312	chr2:28392801-28417312	1	+	28392809	28412448	789624	4	35,252,108,5434,	0,11305,15957,19077,
#Partially deleted in new
chr2	28392857	28417312	chr2:28392857-28417312	3	+	28393720	28412448	789624	4	965,252,108,5383,	0,11249,15901,19072,
#Partially deleted in new
chr2	28395510	28412192	chr2:28395510-28412192	0	+	28404121	28412192	789624	4	266,252,108,263,	0,8596,13248,16419,
#Deleted in new
chr2	28396814	28397110	chr2:28396814-28397110	3	+	28396814	28396814	8553170	1	296,	0,
#Deleted in new
chr2	28425944	28426719	chr2:28425944-28426719	3	+	28425944	28425944	8553170	1	775,	0,
#Deleted in new
chr2	28448166	28450184	chr2:28448166-28450184	3	-	28448166	28448166	8553170	2	704,145,	0,1873,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	28457144	28539165	chr2:28457144-28539165	0	+	28518516	28539165	789624	11	53,62,67,59,41,41,91,52,87,96,67,	0,59663,61321,62560,68122,68760,72172,72583,74963,81141,81954,
#Partially deleted in new
chr2	28460255	28460361	chr2:28460255-28460361	7	-	28460255	28460255	16724991	1	106,	0,
#Partially deleted in new
chr2	28496070	28643747	chr2:28496070-28643747	3	+	28496114	28643061	789624	58	99,62,67,59,41,41,91,52,87,63,80,76,105,57,72,75,64,59,74,44,109,52,81,66,101,82,105,96,72,39,61,59,74,44,109,52,81,66,101,82,105,96,72,66,61,59,68,44,100,52,81,66,92,79,105,96,75,890,	0,20737,22395,23634,29196,29834,33246,33657,36037,42248,43028,44295,45636,47141,52789,53939,56857,66970,69209,70725,77126,82036,83556,85997,86334,89690,93379,93604,93934,95062,95629,96590,97610,101934,102581,104738,105181,105828,106750,107895,108584,109782,110425,117960,121656,122270,124194,124529,124808,128986,130357,132492,133023,134515,135965,136873,144856,146787,
#Partially deleted in new
chr2	28496070	28643788	chr2:28496070-28643788	1	+	28496114	28643061	789624	57	99,62,67,59,41,41,91,52,87,96,80,76,105,57,72,75,64,59,74,44,109,52,81,101,82,105,96,72,39,61,59,74,44,109,52,81,66,101,82,105,96,72,66,61,59,68,44,100,52,81,66,92,79,105,96,75,931,	0,20737,22395,23634,29196,29834,33246,33657,36037,42215,43028,44295,45636,47141,52789,53939,56857,66970,69209,70725,77126,82036,83556,86334,89690,93379,93604,93934,95062,95629,96590,97610,101934,102581,104738,105181,105828,106750,107895,108584,109782,110425,117960,121656,122270,124194,124529,124808,128986,130357,132492,133023,134515,135965,136873,144856,146787,
#Partially deleted in new
chr2	28496118	28643152	chr2:28496118-28643152	0	+	28496118	28643061	789624	57	51,62,67,59,41,41,91,52,87,96,80,76,105,57,72,75,64,59,74,44,109,52,81,101,82,105,96,72,39,61,59,74,44,109,52,81,66,101,82,105,96,72,66,61,59,68,44,100,52,81,66,92,79,105,96,75,295,	0,20689,22347,23586,29148,29786,33198,33609,35989,42167,42980,44247,45588,47093,52741,53891,56809,66922,69161,70677,77078,81988,83508,86286,89642,93331,93556,93886,95014,95581,96542,97562,101886,102533,104690,105133,105780,106702,107847,108536,109734,110377,117912,121608,122222,124146,124481,124760,128938,130309,132444,132975,134467,135917,136825,144808,146739,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr2	28548499	28596063	chr2:28548499-28596063	0	+	28548499	28594053	789624	21	66,72,75,64,59,74,44,109,52,81,66,101,82,105,96,72,39,61,59,74,2092,	0,360,1510,4428,14541,16780,18296,24697,29607,31127,33568,33905,37261,40950,41175,41505,42633,43200,44161,45181,45472,
#Partially deleted in new
chr2	28566442	28578147	chr2:28566442-28578147	0	+	28566442	28566442	8553170	3	397,109,41,	0,6754,11664,
#Partially deleted in new
chr2	28585579	28591158	chr2:28585579-28591158	0	+	28585579	28585579	8553170	5	263,105,96,72,26,	0,3870,4095,4425,5553,
#Partially deleted in new
chr2	28601886	28618452	chr2:28601886-28618452	0	+	28601886	28601886	8553170	6	78,101,72,66,61,112,	0,934,4609,12144,15840,16454,
#Partially deleted in new
chr2	28601918	28643267	chr2:28601918-28643267	0	+	28601918	28606535	789624	18	46,101,72,66,61,59,68,44,100,52,81,66,92,79,105,96,75,410,	0,902,4577,12112,15808,16422,18346,18681,18960,23138,24509,26644,27175,28667,30117,31025,39008,40939,
#Partially deleted in new
chr2	28604726	28643233	chr2:28604726-28643233	0	+	28604726	28628624	789624	18	33,96,72,66,61,59,68,44,100,52,121,66,92,79,105,96,75,376,	0,1126,1769,9304,13000,13614,15538,15873,16152,20330,21701,23836,24367,25859,27309,28217,36200,38131,
#Partially deleted in new
chr2	28620671	28630664	chr2:28620671-28630664	0	+	28620671	28620671	8553170	6	307,52,81,66,92,79,	0,4385,5756,7891,8422,9914,
#Partially deleted in new
chr2	28630585	28643267	chr2:28630585-28643267	0	+	28630585	28643061	789624	4	79,105,96,410,	0,1450,2358,12272,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	28633281	28664540	chr2:28633281-28664540	3	-	28633281	28633281	8553170	2	122,459,	0,30800,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	28683975	28684083	chr2:28683975-28684083	7	+	28683975	28683975	16724991	1	108,	0,
#Partially deleted in new
chr2	28708952	28736205	chr2:28708952-28736205	3	-	28708952	28708952	8553170	2	547,179,	0,27074,
#Partially deleted in new
chr2	28709324	28736192	chr2:28709324-28736192	1	-	28709324	28709324	8553170	4	175,72,73,166,	0,22341,22586,26702,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	28722439	28736109	chr2:28722439-28736109	1	-	28722439	28722439	8553170	3	567,73,83,	0,9471,13587,
#Partially deleted in new
chr2	28751639	28783978	chr2:28751639-28783978	0	+	28776882	28783978	789624	5	181,132,231,105,72,	0,25211,27169,30098,32267,
#Partially deleted in new
chr2	28751675	28778999	chr2:28751675-28778999	0	+	28752124	28778999	789624	4	108,139,132,191,	0,362,25175,27133,
#Partially deleted in new
chr2	28751738	28779039	chr2:28751738-28779039	0	+	28752124	28779039	789624	4	82,139,132,231,	0,299,25112,27070,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	28751745	28778931	chr2:28751745-28778931	0	+	28776882	28778445	789624	4	75,132,239,123,	0,25105,26605,27063,
#Partially deleted in new
chr2	28751747	28802930	chr2:28751747-28802930	3	+	28752124	28799303	789624	9	73,139,132,231,105,72,152,135,3732,	0,290,25103,27061,29990,32159,36910,42115,47451,
#Partially deleted in new
chr2	28751813	28801648	chr2:28751813-28801648	1	+	28752124	28799303	789624	9	111,139,132,231,105,72,152,135,2450,	0,224,25037,26995,29924,32093,36844,42049,47385,
#Partially deleted in new
chr2	28751852	28802940	chr2:28751852-28802940	1	+	28752124	28799303	789624	8	324,132,231,105,72,152,135,3742,	0,24998,26956,29885,32054,36805,42010,47346,
#Partially deleted in new
chr2	28752010	28777261	chr2:28752010-28777261	0	+	28752010	28752010	8553170	2	166,411,	0,24840,
#Partially deleted in new
chr2	28778999	28781978	chr2:28778999-28781978	0	+	28778999	28781946	789624	2	40,241,	0,2738,
#Partially deleted in new
chr2	28782516	28840801	chr2:28782516-28840801	0	+	28782516	28782516	8553170	11	347,72,152,135,101,74,253,59,86,172,630,	0,1390,6141,11346,16682,32096,33480,36531,39808,46631,57655,
#Deleted in new
chr2	28810280	28810706	chr2:28810280-28810706	3	-	28810280	28810280	8553170	1	426,	0,
#Partially deleted in new
chr2	28810818	28850611	chr2:28810818-28850611	3	+	28816014	28849941	0	7	129,253,59,86,172,298,762,	0,5178,8229,11506,18329,29353,39031,
#Partially deleted in new
chr2	28810828	28850330	chr2:28810828-28850330	0	+	28810828	28810828	8553170	3	119,298,481,	0,29343,39021,
#Partially deleted in new
chr2	28810850	28850611	chr2:28810850-28850611	1	+	28816014	28849941	0	8	97,74,253,59,86,172,298,762,	0,3762,5146,8197,11474,18297,29321,38999,
#Partially deleted in new
chr2	28810907	28822413	chr2:28810907-28822413	0	+	28816014	28822413	789624	5	283,74,253,59,89,	0,3705,5089,8140,11417,
#Partially deleted in new
chr2	28829149	28850434	chr2:28829149-28850434	0	+	28829149	28849852	789624	2	170,585,	0,20700,
#Partially deleted in new
chr2	28840357	28842276	chr2:28840357-28842276	0	+	28840357	28840357	8553170	2	112,265,	0,1654,
#Partially deleted in new
chr2	28849820	28870301	chr2:28849820-28870301	3	-	28850198	28870277	0	7	422,78,227,92,191,103,723,	0,507,1251,2587,11297,15196,19758,
#Partially deleted in new
chr2	28849820	28851283	chr2:28849820-28851283	0	-	28850198	28851283	789624	3	422,78,185,	0,507,1278,
#Partially deleted in new
chr2	28849839	28870295	chr2:28849839-28870295	0	-	28850389	28870277	789624	6	403,78,92,191,103,717,	0,488,2568,11278,15177,19739,
#Partially deleted in new
chr2	28851190	28861490	chr2:28851190-28861490	0	-	28851190	28851190	8553170	3	108,92,373,	0,1217,9927,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	28851268	28861949	chr2:28851268-28861949	0	-	28851268	28851268	8553170	4	30,92,191,38,	0,1139,9849,10643,
#Partially deleted in new
chr2	28894642	28948222	chr2:28894642-28948222	3	+	28894698	28946779	789624	18	281,138,122,121,140,103,65,172,87,132,132,87,32,64,114,70,50,1623,	0,7344,11817,17947,19426,23250,28276,30339,31825,32926,34936,40878,42279,43288,46818,47669,51807,51957,
#Partially deleted in new
chr2	28895085	28902104	chr2:28895085-28902104	0	+	28902028	28902104	789624	2	268,118,	0,6901,
#Partially deleted in new
chr2	28895803	28914170	chr2:28895803-28914170	0	+	28902028	28914170	789624	5	58,138,122,121,102,	0,6183,10656,16786,18265,
#Partially deleted in new
chr2	28905005	28926485	chr2:28905005-28926485	0	+	28912647	28926485	789624	8	46,122,121,140,103,65,172,18,	0,1454,7584,9063,12887,17913,19976,21462,
#Deleted in new
chr2	28913663	28913748	chr2:28913663-28913748	3	+	28913663	28913663	789624	1	85,	0,
#Partially deleted in new
chr2	28925096	28935740	chr2:28925096-28935740	0	+	28925096	28925096	8553170	5	57,87,132,132,220,	0,1371,2472,4482,10424,
#Deleted in new
chr2	28927066	28927144	chr2:28927066-28927144	3	+	28927066	28927066	789624	1	78,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	28927242	28927340	chr2:28927242-28927340	3	-	28927242	28927242	8553170	1	98,	0,
#Deleted in new
chr2	28927982	28928060	chr2:28927982-28928060	3	+	28927982	28927982	5263520	1	78,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	28930057	28946669	chr2:28930057-28946669	0	+	28930057	28930057	8553170	8	92,87,32,64,114,70,50,70,	0,5463,6864,7873,11403,12254,16392,16542,
#Partially deleted in new
chr2	28956610	29033520	chr2:28956610-29033520	0	+	29024216	29033520	789624	7	87,16,52,236,159,118,52,	0,38114,57899,67528,70242,76323,76858,
#Partially deleted in new
chr2	28970938	28999248	chr2:28970938-28999248	0	+	28994834	28999248	789624	4	176,138,111,68,	0,23786,27204,28242,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	28972413	28972521	chr2:28972413-28972521	3	-	28972413	28972413	8553170	1	108,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr2	28981297	29061373	chr2:28981297-29061373	3	+	28994834	29052093	789624	20	241,138,111,288,212,191,47,167,151,165,151,106,236,159,118,95,193,217,87,9618,	0,13427,16845,17883,21238,22194,30157,33097,35856,36494,40860,41788,42841,45555,51636,52171,54166,55243,64026,70458,
#Partially deleted in new
chr2	29014466	29052230	chr2:29014466-29052230	0	+	29014466	29014466	8553170	11	95,151,106,236,159,118,95,193,217,87,475,	0,7691,8619,9672,12386,18467,19002,20997,22074,30857,37289,
#Partially deleted in new
chr2	29018260	29024374	chr2:29018260-29024374	0	+	29023089	29024374	789624	3	316,106,236,	0,4825,5878,
#Partially deleted in new
chr2	29032770	29036587	chr2:29032770-29036587	0	+	29032770	29032770	8553170	4	281,95,193,47,	0,698,2693,3770,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	29033430	29052230	chr2:29033430-29052230	0	+	29033430	29033430	8553170	4	133,193,217,6907,	0,2033,3110,11893,
#Deleted in new
chr2	29060975	29062155	chr2:29060975-29062155	0	-	29060975	29060975	8553170	3	63,166,352,	0,514,828,
#Partially deleted in new
chr2	29061691	29074261	chr2:29061691-29074261	3	-	29064868	29074261	789624	2	3376,3668,	0,8902,
#Deleted in new
chr2	29096842	29097525	chr2:29096842-29097525	3	-	29096842	29096842	8553170	2	171,231,	0,452,
#Partially deleted in new
chr2	29097704	29174713	chr2:29097704-29174713	1	+	29121388	29174449	0	15	243,148,140,94,162,119,237,136,144,90,144,135,124,65,341,	0,23669,33553,34447,35950,37843,46004,47527,54980,58649,59499,62628,66126,69771,76668,
#Partially deleted in new
chr2	29097727	29189643	chr2:29097727-29189643	1	+	29132199	29189605	789624	16	220,140,94,162,119,237,136,144,90,144,135,124,65,73,126,153,	0,33530,34424,35927,37820,45981,47504,54957,58626,59476,62605,66103,69748,76645,83844,91763,
#Partially deleted in new
chr2	29097740	29174641	chr2:29097740-29174641	0	+	29121388	29160366	789624	15	207,148,140,94,162,119,237,136,144,90,199,135,124,65,269,	0,23633,33517,34411,35914,37807,45968,47491,54944,58613,59463,62592,66090,69735,76632,
#Partially deleted in new
chr2	29113995	29181923	chr2:29113995-29181923	1	+	29121388	29181893	0	16	317,148,140,94,162,119,237,136,144,90,144,135,124,65,73,352,	0,7378,17262,18156,19659,21552,29713,31236,38689,42358,43208,46337,49835,53480,60377,67576,
#Partially deleted in new
chr2	29114877	29174712	chr2:29114877-29174712	0	+	29121388	29133675	789624	14	272,148,140,162,119,237,136,144,90,199,135,124,65,340,	0,6496,16380,18777,20670,28831,30354,37807,41476,42326,45455,48953,52598,59495,
#Partially deleted in new
chr2	29115425	29183813	chr2:29115425-29183813	3	+	29121388	29181893	0	16	240,148,140,94,162,119,237,136,144,90,144,135,124,65,73,2242,	0,5948,15832,16726,18229,20122,28283,29806,37259,40928,41778,44907,48405,52050,58947,66146,
#Partially deleted in new
chr2	29118194	29135662	chr2:29118194-29135662	0	+	29121388	29135662	789624	6	167,148,140,94,162,115,	0,3179,13063,13957,15460,17353,
#Partially deleted in new
chr2	29121513	29132650	chr2:29121513-29132650	0	+	29121513	29121513	8553170	2	8,1393,	0,9744,
#Partially deleted in new
chr2	29130613	29131360	chr2:29130613-29131360	0	+	29130613	29130613	8553170	2	274,103,	0,644,
#Partially deleted in new
chr2	29130670	29135618	chr2:29130670-29135618	0	+	29132199	29135618	789624	5	95,140,94,162,71,	0,587,1481,2984,4877,
#Partially deleted in new
chr2	29160365	29167876	chr2:29160365-29167876	0	+	29160365	29160365	8553170	3	102,124,401,	0,3465,7110,
#Partially deleted in new
chr2	29175362	29181758	chr2:29175362-29181758	0	+	29175362	29175362	8553170	2	238,187,	0,6209,
#Partially deleted in new
chr2	29192773	29921566	chr2:29192773-29921566	3	-	29193223	29920659	0	29	1149,91,135,102,93,98,130,65,91,187,105,153,99,183,145,132,151,163,129,95,170,101,132,132,128,202,165,120,1574,	0,3996,4768,14397,17012,21210,27932,29570,29743,30568,32687,34148,34800,36110,39530,40791,46906,58331,82325,82628,104114,125530,127977,135576,190958,339141,502076,524804,727219,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	29192773	29223900	chr2:29192773-29223900	1	-	29193223	29223496	789624	10	1149,91,135,102,93,98,130,65,91,559,	0,3996,4768,14397,17012,21210,27932,29570,29743,30568,
#Partially deleted in new
chr2	29192776	29717700	chr2:29192776-29717700	1	-	29193223	29531937	789624	28	1146,91,135,102,93,98,130,65,91,187,105,153,99,183,145,132,151,163,129,95,170,101,132,132,128,202,165,123,	0,3993,4765,14394,17009,21207,27929,29567,29740,30565,32684,34145,34797,36107,39527,40788,46903,58328,82322,82625,104111,125527,127974,135573,190955,339138,502073,524801,
#Partially deleted in new
chr2	29192793	29227653	chr2:29192793-29227653	0	-	29224628	29227653	789624	14	1129,91,135,102,93,98,130,65,91,187,61,105,153,80,	0,3976,4748,14377,16992,21190,27912,29550,29723,30548,31824,32667,34128,34780,
#Partially deleted in new
chr2	29193206	29224727	chr2:29193206-29224727	0	-	29193206	29193206	8553170	11	716,91,135,102,93,98,130,65,91,187,49,	0,3563,4335,13964,16579,20777,27499,29137,29310,30135,31472,
#Deleted in new
chr2	29220869	29223394	chr2:29220869-29223394	0	-	29220987	29223394	789624	4	368,65,91,53,	0,1474,1647,2472,
#Partially deleted in new
chr2	29286409	29319211	chr2:29286409-29319211	0	-	29286409	29286409	8553170	5	107,81,170,101,101,	0,344,10478,31894,32701,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	29681026	29681323	chr2:29681026-29681323	3	-	29681026	29681026	8553170	1	297,	0,
#Deleted in new
chr2	29890370	29892354	chr2:29890370-29892354	3	+	29890370	29890370	8553170	2	615,76,	0,1908,
#Partially deleted in new
chr2	30077092	30078272	chr2:30077092-30078272	7	+	30077092	30077092	16724991	2	155,280,	0,900,
#Partially deleted in new
chr2	30111174	30136333	chr2:30111174-30136333	0	-	30111174	30111174	8553170	3	330,82,82,	0,8593,25077,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	30132344	30143804	chr2:30132344-30143804	3	-	30132344	30132344	8553170	3	299,99,3165,	0,3907,8295,
#Partially deleted in new
chr2	30146940	30160533	chr2:30146940-30160533	1	+	30156651	30158843	789624	4	122,297,165,1915,	0,1304,9687,11678,
#Partially deleted in new
chr2	30146940	30160533	chr2:30146940-30160533	3	+	30156651	30158843	789624	5	122,297,61,165,1915,	0,1304,8909,9687,11678,
#Partially deleted in new
chr2	30146960	30160533	chr2:30146960-30160533	1	+	30156651	30158843	789624	3	102,165,1915,	0,9667,11658,
#Partially deleted in new
chr2	30146962	30156787	chr2:30146962-30156787	0	+	30146962	30146962	8553170	4	100,297,96,160,	0,1282,8852,9665,
#Partially deleted in new
chr2	30147006	30160533	chr2:30147006-30160533	1	+	30156651	30158843	789624	4	56,61,165,1915,	0,1238,9621,11612,
#Partially deleted in new
chr2	30147515	30159551	chr2:30147515-30159551	1	+	30156651	30158843	789624	4	576,61,165,933,	0,8334,9112,11103,
#Deleted in new
chr2	30147560	30148334	chr2:30147560-30148334	0	+	30147560	30147560	8553170	2	405,90,	0,684,
#Partially deleted in new
chr2	30147951	30158966	chr2:30147951-30158966	0	+	30147951	30147951	8553170	3	140,165,348,	0,8676,10667,
#Partially deleted in new
chr2	30147956	30158747	chr2:30147956-30158747	0	+	30147956	30147956	8553170	5	135,297,61,165,129,	0,288,7893,8671,10662,
#Partially deleted in new
chr2	30156377	30159138	chr2:30156377-30159138	0	+	30156377	30156377	8553170	2	415,520,	0,2241,
#Deleted in new
chr2	30187433	30187566	chr2:30187433-30187566	3	+	30187433	30187433	5263520	1	133,	0,
#Deleted in new
chr2	30209994	30210307	chr2:30209994-30210307	7	+	30209994	30209994	16724991	2	156,120,	0,193,
#Partially deleted in new
chr2	30231368	30260028	chr2:30231368-30260028	3	+	30231738	30257621	789624	3	396,103,2596,	0,3036,26064,
#Partially deleted in new
chr2	30231536	30323730	chr2:30231536-30323730	1	+	30231738	30323536	789624	3	228,103,212,	0,2868,91982,
#Partially deleted in new
chr2	30231536	30257656	chr2:30231536-30257656	1	+	30231738	30257458	789624	3	228,107,224,	0,2868,25896,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	30231536	30256701	chr2:30231536-30256701	0	+	30231536	30231536	8553170	3	228,103,163,	0,2868,25002,
#Partially deleted in new
chr2	30232152	30257760	chr2:30232152-30257760	1	+	30232162	30257621	789624	3	54,103,328,	0,2252,25280,
#Partially deleted in new
chr2	30232156	30258040	chr2:30232156-30258040	0	+	30232156	30232156	8553170	3	978,103,608,	0,2248,25276,
#Partially deleted in new
chr2	30232179	30257670	chr2:30232179-30257670	1	+	30234429	30257621	789624	3	415,103,238,	0,2225,25253,
#Partially deleted in new
chr2	30234265	30257700	chr2:30234265-30257700	0	+	30234265	30234265	8553170	2	242,268,	0,23167,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	30346658	30352431	chr2:30346658-30352431	3	+	30346658	30346658	8553170	2	457,2495,	0,3278,
#Deleted in new
chr2	30408169	30408346	chr2:30408169-30408346	3	+	30408169	30408169	8553170	1	177,	0,
#Partially deleted in new
chr2	30447225	30552549	chr2:30447225-30552549	0	+	30525590	30552549	789624	4	158,169,199,57,	0,78361,85890,105267,
#Partially deleted in new
chr2	30447235	30644224	chr2:30447235-30644224	3	+	30525590	30640619	789624	6	148,169,199,147,117,4108,	0,78351,85880,114910,120824,192881,
#Partially deleted in new
chr2	30447235	30562190	chr2:30447235-30562190	0	+	30525590	30562190	789624	4	169,169,199,45,	0,78351,85880,114910,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	30447242	30607845	chr2:30447242-30607845	1	+	30459612	30606200	789624	7	141,171,169,199,147,117,1830,	0,12309,78344,85873,114903,120817,158773,
#Partially deleted in new
chr2	30447245	30640947	chr2:30447245-30640947	0	+	30447245	30447245	8553170	6	159,199,157,147,117,831,	0,85870,105247,114900,120814,192871,
#Partially deleted in new
chr2	30447248	30533266	chr2:30447248-30533266	0	+	30525590	30533266	789624	4	135,81,169,151,	0,41911,78338,85867,
#Partially deleted in new
chr2	30447256	30644225	chr2:30447256-30644225	1	+	30459612	30640619	789624	7	148,171,169,199,147,117,4109,	0,12295,78330,85859,114889,120803,192860,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	30447272	30640830	chr2:30447272-30640830	0	+	30459612	30476492	789624	8	111,171,234,169,199,147,117,714,	0,12279,29129,78314,85843,114873,120787,192844,
#Partially deleted in new
chr2	30447275	30568167	chr2:30447275-30568167	0	+	30525590	30568167	789624	4	108,169,199,108,	0,78311,85840,120784,
#Partially deleted in new
chr2	30447387	30533297	chr2:30447387-30533297	0	+	30459612	30533297	789624	4	136,171,169,182,	0,12164,78199,85728,
#Partially deleted in new
chr2	30447402	30562193	chr2:30447402-30562193	0	+	30525590	30562193	789624	4	121,169,199,48,	0,78184,85713,114743,
#Deleted in new
chr2	30677761	30679895	chr2:30677761-30679895	3	+	30677761	30677761	8553170	1	2134,	0,
#Partially deleted in new
chr2	30722770	30807446	chr2:30722770-30807446	3	-	30730759	30787325	0	23	466,57,56,129,76,69,59,58,57,34,197,12,149,146,75,92,75,175,137,116,73,230,145,	0,7959,8573,9667,11678,13732,15464,15629,19137,19555,20612,22952,28332,30282,31519,35275,40311,41361,47542,53159,54796,64357,84531,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	30722770	30743518	chr2:30722770-30743518	0	-	30738201	30743518	789624	11	466,57,56,129,76,127,1132,58,57,34,136,	0,7959,8573,9667,11678,13732,14391,15629,19137,19555,20612,
#Deleted in new
chr2	30729540	30732484	chr2:30729540-30732484	0	-	30729540	30729540	8553170	4	346,57,56,47,	0,1189,1803,2897,
#Partially deleted in new
chr2	30741373	30807426	chr2:30741373-30807426	0	-	30743511	30787325	0	16	591,34,153,12,149,146,75,92,75,175,137,116,73,230,86,125,	0,952,2009,4349,9729,11679,12916,16672,21708,22758,28939,34556,36193,45754,64807,65928,
#Partially deleted in new
chr2	30743143	30751226	chr2:30743143-30751226	0	-	30743143	30743143	8553170	3	436,12,124,	0,2579,7959,
#Deleted in new
chr2	30746443	30746701	chr2:30746443-30746701	7	-	30746443	30746443	16724991	1	258,	0,
#Partially deleted in new
chr2	30758045	30820542	chr2:30758045-30820542	0	-	30758045	30758045	8553170	9	92,75,175,137,116,73,230,246,71,	0,5036,6086,12267,17884,19521,29082,49256,62426,
#Partially deleted in new
chr2	30764247	30807426	chr2:30764247-30807426	0	-	30770411	30787325	789624	6	59,137,73,230,86,125,	0,6065,13319,22880,41933,43054,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	30887625	30897387	chr2:30887625-30897387	3	-	30887625	30887625	8553170	5	140,180,131,194,160,	0,1040,1408,1879,9602,
#Partially deleted in new
chr2	30910466	31138147	chr2:30910466-31138147	1	-	30910900	31138086	789624	16	593,120,145,84,93,127,104,85,88,122,66,68,99,85,100,190,	0,1756,13652,14273,18928,21601,31734,34391,35316,45151,45445,47930,55737,204276,214687,227491,
#Partially deleted in new
chr2	30910466	31138726	chr2:30910466-31138726	3	-	30910900	31138086	789624	15	593,120,145,84,93,127,104,85,88,122,66,68,99,170,769,	0,1756,13652,14273,18928,21601,31734,34391,35316,45151,45445,47930,55737,82371,227491,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	30910467	31129624	chr2:30910467-31129624	1	-	30910900	31114811	789624	17	592,120,145,84,93,127,104,85,88,122,66,68,99,170,85,100,348,	0,1755,13651,14272,18927,21600,31733,34390,35315,45150,45444,47929,55736,82370,204275,214686,218809,
#Partially deleted in new
chr2	30910598	30924823	chr2:30910598-30924823	0	-	30910598	30910598	8553170	4	461,120,179,84,	0,1624,13520,14141,
#Partially deleted in new
chr2	30910698	30955684	chr2:30910698-30955684	0	-	30910698	30910698	8553170	8	361,120,93,127,104,85,88,67,	0,1524,18696,21369,31502,34159,35084,44919,
#Partially deleted in new
chr2	30924197	31138503	chr2:30924197-31138503	0	-	30924197	31138086	789624	12	66,84,93,127,104,85,88,122,66,68,170,546,	0,542,5197,7870,18003,20660,21585,31420,31714,34199,68640,213760,
#Partially deleted in new
chr2	30924784	31138055	chr2:30924784-31138055	0	-	30992993	31138055	789624	10	39,93,127,122,66,68,99,170,100,98,	0,4610,7283,30833,31127,33612,41419,68053,200369,213173,
#Partially deleted in new
chr2	30932116	31155202	chr2:30932116-31155202	0	-	30932116	30932116	8553170	9	78,122,66,68,99,170,189,147,52,	0,23501,23795,26280,34087,60721,214805,221730,223034,
#Partially deleted in new
chr2	30932166	30991209	chr2:30932166-30991209	0	-	30932166	30932166	8553170	9	28,104,85,88,122,66,68,99,78,	0,10034,12691,13616,23451,23745,26230,34037,58965,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	30945841	31138055	chr2:30945841-31138055	0	-	31132694	31138055	789624	8	29,122,66,68,99,170,83,98,	0,9776,10070,12555,20362,46996,186788,192116,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	30955729	31129377	chr2:30955729-31129377	0	-	30955729	30955729	8553170	8	10,66,68,99,170,113,100,101,	0,182,2667,10474,37108,117333,169424,173547,
#Partially deleted in new
chr2	30955928	31138021	chr2:30955928-31138021	0	-	30955928	30955928	8553170	6	49,68,99,170,100,64,	0,2468,10275,36909,169225,182029,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	30966271	31129640	chr2:30966271-31129640	0	-	30966271	30966271	8553170	3	31,170,364,	0,26566,163005,
#Partially deleted in new
chr2	30966276	31126861	chr2:30966276-31126861	0	-	30966276	30966276	8553170	5	26,170,85,100,173,	0,26561,148466,158877,160412,
#Partially deleted in new
chr2	30986938	30991426	chr2:30986938-30991426	3	+	30986938	30986938	8553170	2	109,259,	0,4229,
#Partially deleted in new
chr2	31065124	31146978	chr2:31065124-31146978	0	-	31065124	31065124	8553170	4	283,133,100,57,	0,13809,60029,81797,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr2	31173055	31233858	chr2:31173055-31233858	0	-	31200607	31205447	789624	22	1652,56,117,76,69,65,58,57,37,206,9,164,164,75,86,63,175,119,70,277,124,68,	0,3531,3970,4690,5455,7880,13372,14702,15262,16217,18343,18879,20075,21353,24193,26414,27395,29078,30014,32167,53472,60735,
#Partially deleted in new
chr2	31174680	31217545	chr2:31174680-31217545	3	-	31174680	31205447	789624	22	27,56,117,76,69,65,58,57,37,206,9,164,164,75,86,63,175,137,119,70,277,90,	0,1906,2345,3065,3830,6255,11747,13077,13637,14592,16718,17254,18450,19728,22568,24789,25770,27181,27453,28389,30542,42775,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	31228311	31228410	chr2:31228311-31228410	7	+	31228311	31228311	16724991	1	99,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	31234336	31269447	chr2:31234336-31269447	3	+	31234621	31266704	789624	6	512,177,98,413,165,3271,	0,9937,15034,26173,27212,31840,
#Partially deleted in new
chr2	31290761	31291604	chr2:31290761-31291604	7	+	31290761	31290761	16724991	2	117,414,	0,429,
#Boundary problem: need 36, got 0, diff 36, mapped 0.0
chr2	31334320	31414715	chr2:31334320-31414715	3	-	31335957	31414666	0	36	1688,177,189,66,115,53,75,129,96,82,146,192,87,88,134,125,97,120,124,170,84,175,185,110,94,152,93,142,87,69,62,127,109,97,58,91,	0,3320,5168,7008,7862,10363,12448,13201,13947,14578,15365,15711,29837,31136,31655,32549,33640,34220,36034,37907,39552,41059,42732,45546,47312,48680,49434,52093,53490,53906,63347,64252,66899,68727,71586,80304,
#Partially deleted in new
chr2	31383000	31389633	chr2:31383000-31389633	0	-	31383000	31383000	8553170	6	152,93,142,87,69,38,	0,754,3413,4810,5226,6595,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	31383081	31384395	chr2:31383081-31384395	0	-	31383081	31383081	8553170	3	71,93,311,	0,673,1003,
#Partially deleted in new
chr2	31522479	31581067	chr2:31522479-31581067	3	-	31526195	31580900	789624	5	3783,151,102,164,448,	0,6827,8891,11123,58140,
#Partially deleted in new
chr2	31651380	31651862	chr2:31651380-31651862	7	+	31651380	31651380	16724991	1	482,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	31793822	31803980	chr2:31793822-31803980	3	-	31793822	31793822	789624	5	93,8,125,169,23,	0,275,396,9124,10135,
#Partially deleted in new
chr2	31822590	31823436	chr2:31822590-31823436	7	-	31822590	31822590	16724991	1	846,	0,
#Partially deleted in new
chr2	31823412	31823817	chr2:31823412-31823817	7	-	31823412	31823412	16724991	1	405,	0,
#Partially deleted in new
chr2	31852975	31853423	chr2:31852975-31853423	3	-	31852975	31852975	8553170	1	448,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	31865059	32010557	chr2:31865059-32010557	3	-	31868360	32010247	0	9	3433,105,77,143,112,113,69,82,371,	0,4788,18326,26932,52866,55738,67007,78242,145127,
#Partially deleted in new
chr2	31867808	32023757	chr2:31867808-32023757	2	-	31867808	31867808	8553170	10	684,105,77,143,112,113,69,82,53,81,	0,2039,15577,24183,50117,52989,64258,75493,155613,155868,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	31867822	31963298	chr2:31867822-31963298	1	-	31868360	31963241	0	9	670,105,77,143,112,113,69,82,127,	0,2025,15563,24169,50103,52975,64244,75479,95349,
#Partially deleted in new
chr2	31867822	32010974	chr2:31867822-32010974	1	-	31868360	32010247	0	10	670,105,77,143,112,113,69,82,78,33,	0,2025,15563,24169,50103,52975,64244,75479,142364,143119,
#Partially deleted in new
chr2	31867826	32011036	chr2:31867826-32011036	0	-	31867826	31867826	789624	7	666,105,112,113,69,82,95,	0,2021,50099,52971,64240,75475,143115,
#Partially deleted in new
chr2	31867977	32010375	chr2:31867977-32010375	1	-	31868360	32010247	0	8	515,105,77,143,112,113,82,189,	0,1870,15408,24014,49948,52820,75324,142209,
#Partially deleted in new
chr2	31869850	31943383	chr2:31869850-31943383	0	-	31869850	31869850	8553170	3	102,143,82,	0,22141,73451,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	31892052	32010417	chr2:31892052-32010417	0	-	31892052	31892052	8553170	7	82,80,112,113,69,82,231,	0,1189,25873,28745,40014,51249,118134,
#Partially deleted in new
chr2	31923515	32010498	chr2:31923515-32010498	1	-	31923643	32010247	789624	4	219,69,82,312,	0,8551,19786,86671,
#Deleted in new
chr2	32010186	32011230	chr2:32010186-32011230	0	-	32010186	32010247	789624	2	78,237,	0,807,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	32011885	32039754	chr2:32011885-32039754	0	-	32011885	32011885	8553170	7	167,53,132,143,48,72,22,	0,11536,11791,17708,27393,27535,27847,
#Partially deleted in new
chr2	32013060	32013368	chr2:32013060-32013368	3	+	32013060	32013060	8553170	1	308,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	32020939	32039780	chr2:32020939-32039780	0	-	32020939	32020939	8553170	6	160,53,143,48,72,48,	0,2482,8654,18339,18481,18793,
#Partially deleted in new
chr2	32023891	32039812	chr2:32023891-32039812	1	-	32024183	32039456	0	5	365,143,48,72,80,	0,5702,15387,15529,15841,
#Partially deleted in new
chr2	32024101	32039805	chr2:32024101-32039805	1	-	32024183	32039456	0	5	155,143,48,72,213,	0,5492,15177,15319,15491,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	32063546	32157637	chr2:32063546-32157637	3	+	32063831	32154496	0	17	700,87,84,96,188,134,94,75,72,76,92,80,43,80,71,41,3264,	0,23945,25975,35249,51091,52155,52572,63401,64861,73016,73330,73562,78357,79789,81390,83671,90827,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	32063610	32157636	chr2:32063610-32157636	1	+	32063831	32154496	0	16	636,87,84,188,134,94,75,72,76,92,80,43,80,71,41,3263,	0,23881,25911,51027,52091,52508,63337,64797,72952,73266,73498,78293,79725,81326,83607,90763,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	32063610	32157636	chr2:32063610-32157636	1	+	32063831	32154496	0	17	636,87,84,96,188,134,94,75,72,76,92,80,43,80,71,41,3263,	0,23881,25911,35185,51027,52091,52508,63337,64797,72952,73266,73498,78293,79725,81326,83607,90763,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	32063610	32157637	chr2:32063610-32157637	1	+	32063831	32154496	0	16	636,87,84,188,134,94,75,72,76,92,80,43,80,71,41,3264,	0,23881,25911,51027,52091,52508,63337,64797,72952,73266,73498,78293,79725,81326,83607,90763,
#Partially deleted in new
chr2	32063781	32154682	chr2:32063781-32154682	1	+	32063831	32154496	789624	17	465,84,84,96,188,134,94,75,72,76,92,80,43,80,71,41,309,	0,23713,25740,35014,50856,51920,52337,63166,64626,72781,73095,73327,78122,79554,81155,83436,90592,
#Partially deleted in new
chr2	32063827	32154847	chr2:32063827-32154847	1	+	32063831	32154496	789624	16	419,84,84,188,134,94,75,72,76,92,80,43,80,71,41,474,	0,23667,25694,50810,51874,52291,63120,64580,72735,73049,73281,78076,79508,81109,83390,90546,
#Partially deleted in new
chr2	32063947	32155036	chr2:32063947-32155036	0	+	32063947	32154496	789624	15	299,87,84,96,188,134,94,76,92,80,43,80,71,41,663,	0,23544,25574,34848,50690,51754,52171,72615,72929,73161,77956,79388,80989,83270,90426,
#Partially deleted in new
chr2	32063955	32154957	chr2:32063955-32154957	0	+	32063955	32147223	789624	17	291,87,84,96,188,134,94,75,72,76,92,80,43,80,71,64,584,	0,23536,25566,34840,50682,51746,52163,62992,64452,72607,72921,73153,77948,79380,80981,83239,90418,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	32063961	32157637	chr2:32063961-32157637	0	+	32063961	32147257	789624	15	285,87,84,188,134,94,75,72,76,92,80,43,80,41,3264,	0,23530,25560,50676,51740,52157,62986,64446,72601,72915,73147,77942,79374,83256,90412,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	32063967	32157482	chr2:32063967-32157482	1	+	32064089	32154496	0	17	279,87,84,96,188,134,94,75,72,76,92,80,43,80,71,41,3109,	0,23524,25554,34828,50670,51734,52151,62980,64440,72595,72909,73141,77936,79368,80969,83250,90406,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	32063969	32157611	chr2:32063969-32157611	1	+	32064089	32154496	0	16	277,87,84,188,134,94,75,72,76,92,80,43,80,71,41,3238,	0,23522,25552,50668,51732,52149,62978,64438,72593,72907,73139,77934,79366,80967,83248,90404,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	32063990	32114752	chr2:32063990-32114752	0	+	32063990	32077839	789624	6	256,115,87,84,96,115,	0,13838,23501,25531,34805,50647,
#Partially deleted in new
chr2	32063997	32154635	chr2:32063997-32154635	0	+	32063997	32115721	789624	16	249,87,84,96,134,94,75,72,76,92,80,43,80,71,41,262,	0,23494,25524,34798,51704,52121,62950,64410,72565,72879,73111,77906,79338,80939,83220,90376,
#Partially deleted in new
chr2	32064210	32154757	chr2:32064210-32154757	0	+	32064210	32147257	789624	14	36,96,188,134,94,75,72,76,92,80,43,80,41,384,	0,34585,50427,51491,51908,62737,64197,72352,72666,72898,77693,79125,83007,90163,
#Partially deleted in new
chr2	32087491	32154451	chr2:32087491-32154451	0	+	32087491	32098847	789624	16	87,84,91,188,134,94,75,72,76,92,80,43,80,71,41,78,	0,2030,11309,27146,28210,28627,39456,40916,49071,49385,49617,54412,55844,57445,59726,66882,
#Partially deleted in new
chr2	32087501	32155716	chr2:32087501-32155716	0	+	32087501	32154496	789624	15	77,84,96,188,134,94,72,76,92,80,43,80,71,41,1343,	0,2020,11294,27136,28200,28617,40906,49061,49375,49607,54402,55834,57435,59716,66872,
#Partially deleted in new
chr2	32098862	32154495	chr2:32098862-32154495	0	+	32098862	32154495	789624	12	29,188,134,94,75,72,80,43,80,71,41,122,	0,15775,16839,17256,28085,29545,38246,43041,44473,46074,48355,55511,
#Partially deleted in new
chr2	32114796	32143349	chr2:32114796-32143349	0	+	32114796	32137128	789624	9	29,134,94,75,72,76,80,43,14,	0,905,1322,12151,13611,21766,22312,27107,28539,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	32126497	32154799	chr2:32126497-32154799	0	+	32126497	32126497	8553170	9	1982,76,92,80,43,80,71,41,426,	0,10065,10379,10611,15406,16838,18439,20720,27876,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	32126636	32130604	chr2:32126636-32130604	0	+	32126636	32126636	8553170	2	386,2197,	0,1771,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	32165045	32165757	chr2:32165045-32165757	3	-	32165045	32165045	8553170	1	712,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	32165840	32224112	chr2:32165840-32224112	1	+	32165900	32220713	789624	13	63,85,43,66,81,36,95,49,120,103,48,69,3900,	0,8222,9478,18432,26495,27077,28048,31503,31866,38749,41045,43652,54372,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	32165840	32224112	chr2:32165840-32224112	1	+	32165900	32220713	789624	13	63,87,85,43,66,81,36,95,49,120,103,48,3900,	0,5446,8222,9478,18432,26495,27077,28048,31503,31866,38749,41045,54372,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	32165863	32224379	chr2:32165863-32224379	3	+	32165900	32220713	789624	14	40,87,85,43,66,81,36,95,49,120,103,48,69,4167,	0,5423,8199,9455,18409,26472,27054,28025,31480,31843,38726,41022,43629,54349,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	32165863	32221524	chr2:32165863-32221524	1	+	32165900	32220713	789624	15	40,87,85,43,120,66,81,36,95,49,120,103,48,69,1312,	0,5423,8199,9455,11613,18409,26472,27054,28025,31480,31843,38726,41022,43629,54349,
#Partially deleted in new
chr2	32165863	32197784	chr2:32165863-32197784	0	+	32165900	32197784	789624	9	40,85,43,66,81,36,95,49,78,	0,8199,9455,18409,26472,27054,28025,31480,31843,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	32165863	32221740	chr2:32165863-32221740	0	+	32165900	32192341	789624	10	40,87,81,36,95,120,103,48,69,1528,	0,5423,26472,27054,28025,31843,38726,41022,43629,54349,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	32165863	32221666	chr2:32165863-32221666	0	+	32165900	32184277	789624	13	40,87,85,66,81,36,95,75,120,103,48,69,1454,	0,5423,8199,18409,26472,27054,28025,31454,31843,38726,41022,43629,54349,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	32165868	32224099	chr2:32165868-32224099	1	+	32184276	32220713	789624	11	35,66,81,36,95,49,120,103,48,69,3887,	0,18404,26467,27049,28020,31475,31838,38721,41017,43624,54344,
#Partially deleted in new
chr2	32165881	32192951	chr2:32165881-32192951	0	+	32165900	32187236	789624	8	22,87,85,43,66,152,81,34,	0,5405,8181,9437,18391,21270,26454,27036,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	32201599	32203999	chr2:32201599-32203999	7	+	32201599	32201599	16724991	1	2400,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	32214455	32214562	chr2:32214455-32214562	3	-	32214455	32214455	8553170	1	107,	0,
#Partially deleted in new
chr2	32224452	32265732	chr2:32224452-32265732	1	-	32224472	32256775	789624	9	313,168,93,171,93,1995,261,119,146,	0,10948,11794,13679,16580,25154,27966,32322,41134,
#Partially deleted in new
chr2	32224453	32264880	chr2:32224453-32264880	1	-	32224472	32256775	789624	9	312,168,93,171,93,1995,261,119,143,	0,10947,11793,13678,16579,25153,27965,32321,40284,
#Partially deleted in new
chr2	32224454	32265732	chr2:32224454-32265732	1	-	32224472	32256775	789624	8	311,168,93,171,93,261,119,146,	0,10946,11792,13677,16578,27964,32320,41132,
#Partially deleted in new
chr2	32224455	32265854	chr2:32224455-32265854	3	-	32224472	32256775	789624	10	310,168,93,171,93,1995,261,119,103,268,	0,10945,11791,13676,16577,25151,27963,32319,40282,41131,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	32277909	32316594	chr2:32277909-32316594	3	+	32278155	32305626	789624	6	325,154,172,78,114,11106,	0,12573,14267,20324,23472,27579,
#Partially deleted in new
chr2	32278128	32290920	chr2:32278128-32290920	0	+	32278128	32278128	8553170	2	106,438,	0,12354,
#Partially deleted in new
chr2	32278230	32305866	chr2:32278230-32305866	0	+	32278230	32298252	789624	5	4,154,78,114,378,	0,12252,20003,23151,27258,
#Partially deleted in new
chr2	32301442	32307362	chr2:32301442-32307362	0	+	32301442	32307151	789624	2	53,259,	0,5661,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	32321637	32323002	chr2:32321637-32323002	3	+	32321637	32321637	8553170	1	1365,	0,
#Partially deleted in new
chr2	32357027	32618899	chr2:32357027-32618899	3	+	32357161	32617904	789624	74	459,182,138,194,112,83,223,161,59,1395,150,226,161,90,132,179,134,162,132,98,148,134,135,188,315,100,215,209,347,220,134,111,128,132,216,184,156,134,154,117,155,127,111,134,128,563,176,97,195,201,280,257,109,222,781,144,130,132,165,174,197,301,218,165,169,211,146,111,218,162,78,189,135,1175,	0,20560,23125,31722,35011,38483,44135,44435,49471,57741,72118,73837,76616,78468,79025,82480,84301,85037,85296,86463,88493,91767,96780,106166,107481,108037,110497,110875,111409,112367,113140,113986,116084,119185,120340,121607,122434,124292,125401,128615,130619,131560,133013,134397,136512,142519,144685,145767,146014,147977,150952,152710,153498,155905,157962,161226,161789,167860,168436,172623,174327,186213,188615,190822,192285,218128,236887,238006,240723,242711,245978,250427,254420,260697,
#Partially deleted in new
chr2	32377630	32379599	chr2:32377630-32379599	3	-	32377630	32377630	8553170	2	49,648,	0,1321,
#Partially deleted in new
chr2	32388810	32401419	chr2:32388810-32401419	0	+	32388810	32388810	8553170	4	133,112,83,257,	0,3228,6700,12352,
#Partially deleted in new
chr2	32433647	32441435	chr2:32433647-32441435	0	+	32433647	32441435	789624	4	157,132,179,107,	0,2405,5860,7681,
#Partially deleted in new
chr2	32436074	32442380	chr2:32436074-32442380	0	+	32436074	32442106	789624	4	110,179,162,57,	0,3433,5990,6249,
#Partially deleted in new
chr2	32443425	32449185	chr2:32443425-32449185	0	+	32443425	32443425	8553170	3	163,148,391,	0,2095,5369,
#Partially deleted in new
chr2	32472991	32476281	chr2:32472991-32476281	0	+	32472991	32472991	8553170	2	248,69,	0,3221,
#Partially deleted in new
chr2	32502859	32505355	chr2:32502859-32505355	0	+	32502859	32502859	8553170	3	32,195,351,	0,182,2145,
#Partially deleted in new
chr2	32509678	32513089	chr2:32509678-32513089	0	+	32509678	32509678	8553170	3	316,109,157,	0,847,3254,
#Partially deleted in new
chr2	32515740	32519219	chr2:32515740-32519219	0	+	32515740	32515740	8553170	3	30,144,403,	0,2513,3076,
#Deleted in new
chr2	32521926	32523547	chr2:32521926-32523547	3	+	32521926	32521926	8553170	1	1621,	0,
#Partially deleted in new
chr2	32524757	32618876	chr2:32524757-32618876	0	+	32524757	32524757	8553170	18	262,165,174,197,301,218,165,169,211,173,146,111,218,162,78,189,135,1152,	0,706,4893,6597,18483,20885,23092,24555,50398,66048,69157,70276,72993,74981,78248,82697,86690,92967,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	32526503	32529507	chr2:32526503-32529507	3	+	32526503	32526503	8553170	1	3004,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	32532152	32532246	chr2:32532152-32532246	3	+	32532152	32532152	5263520	1	94,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	32548674	32549040	chr2:32548674-32549040	3	+	32548674	32548674	8553170	1	366,	0,
#Deleted in new
chr2	32557272	32558883	chr2:32557272-32558883	5	-	32557272	32557272	16724991	2	600,230,	0,1381,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	32557519	32574818	chr2:32557519-32574818	7	-	32557519	32557519	16724991	2	353,236,	0,17063,
#Deleted in new
chr2	32557702	32557847	chr2:32557702-32557847	5	-	32557702	32557702	16724991	1	145,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	32563327	32566436	chr2:32563327-32566436	3	+	32563327	32563327	8553170	1	3109,	0,
#Partially deleted in new
chr2	32575290	32594310	chr2:32575290-32594310	0	+	32575290	32575290	8553170	2	76,396,	0,18624,
#Partially deleted in new
chr2	32602496	32611581	chr2:32602496-32611581	0	+	32602496	32602496	8553170	3	587,189,134,	0,4958,8951,
#Partially deleted in new
chr2	32628031	32640368	chr2:32628031-32640368	0	+	32630584	32640368	789624	4	102,178,130,99,	0,2491,5844,12238,
#Partially deleted in new
chr2	32628061	32821051	chr2:32628061-32821051	3	+	32628292	32820938	789624	20	319,178,130,141,103,165,134,113,67,114,96,123,228,99,53,166,198,112,101,236,	0,2461,5814,12208,22069,36241,38573,44210,50794,74745,105766,108632,130230,149820,154564,158922,182962,184442,189395,192754,
#Partially deleted in new
chr2	32628155	32733921	chr2:32628155-32733921	0	+	32628292	32678893	789624	4	225,67,114,94,	0,50700,74651,105672,
#Deleted in new
chr2	32635254	32635331	chr2:32635254-32635331	3	+	32635254	32635254	5263520	1	77,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	32678877	32704998	chr2:32678877-32704998	0	+	32678877	32704917	789624	3	45,114,138,	0,23929,25983,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	32777881	32812615	chr2:32777881-32812615	0	+	32777881	32780095	789624	6	99,59,53,166,198,112,	0,2172,4744,9102,33142,34622,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	32825358	32842511	chr2:32825358-32842511	1	+	32825358	32825358	8553170	7	152,161,95,160,221,113,473,	0,11215,11952,15411,15654,16436,16680,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	32825442	32926693	chr2:32825442-32926693	3	+	32825442	32825442	789624	5	68,221,103,61,1341,	0,15570,73097,76620,99910,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	32882800	32926522	chr2:32882800-32926522	0	+	32882800	32882800	5263520	4	26,103,61,1170,	0,15739,19262,42552,
#Deleted in new
chr2	32927126	32928405	chr2:32927126-32928405	3	+	32927126	32927126	789624	3	220,92,170,	0,905,1109,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	32945338	32945451	chr2:32945338-32945451	3	-	32945338	32945338	8553170	1	113,	0,
#Partially deleted in new
chr2	32946971	33399359	chr2:32946971-33399359	1	+	32947324	33398545	0	34	847,71,298,170,168,225,275,103,72,123,168,228,23,100,99,126,126,123,120,123,123,123,123,126,126,144,183,87,129,141,171,123,150,996,	0,1903,73937,163610,187821,239884,241605,270580,275108,296690,305705,310312,312616,315750,316322,326684,327993,328829,333067,346188,353479,354550,362462,368172,395866,400395,413625,414457,416418,417244,418361,442212,450161,451392,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	33056332	33063113	chr2:33056332-33063113	7	-	33056332	33056332	16724991	3	177,15,66,	0,5075,6715,
#Partially deleted in new
chr2	33134405	33188676	chr2:33134405-33188676	0	+	33186875	33188676	789624	4	100,168,225,100,	0,387,52450,54171,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr2	33134596	33399506	chr2:33134596-33399506	1	+	33134737	33398545	789624	29	364,225,275,103,72,123,168,228,23,100,99,126,126,123,120,123,123,123,123,126,144,183,87,129,141,171,123,150,1143,	0,52259,53980,82955,87483,109065,118080,122687,124991,128125,128697,139059,140368,141204,145442,158563,165854,166925,174837,180547,212770,226000,226832,228793,229619,230736,254587,262536,263767,
#Partially deleted in new
chr2	33134624	33399357	chr2:33134624-33399357	1	+	33134737	33398545	789624	30	336,225,275,103,72,123,168,69,23,100,99,126,126,123,120,123,123,123,123,126,126,144,177,87,129,141,171,123,150,994,	0,52231,53952,82927,87455,109037,118052,122818,124963,128097,128669,139031,140340,141176,145414,158535,165826,166897,174809,180519,208213,212742,225978,226804,228765,229591,230708,254559,262508,263739,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr2	33134638	33399509	chr2:33134638-33399509	1	+	33134737	33398545	0	30	322,225,275,103,72,123,168,69,23,100,99,126,126,123,120,123,123,123,123,126,126,144,183,87,129,141,171,123,150,1146,	0,52217,53938,82913,87441,109023,118038,122804,124949,128083,128655,139017,140326,141162,145400,158521,165812,166883,174795,180505,208199,212728,225958,226790,228751,229577,230694,254545,262494,263725,
#Partially deleted in new
chr2	33134656	33399363	chr2:33134656-33399363	3	+	33134737	33398545	0	30	304,225,275,103,72,123,168,228,23,100,99,126,126,123,120,123,123,123,123,126,126,144,183,87,129,141,171,123,150,1000,	0,52199,53920,82895,87423,109005,118020,122627,124931,128065,128637,138999,140308,141144,145382,158503,165794,166865,174777,180487,208181,212710,225940,226772,228733,229559,230676,254527,262476,263707,
#Partially deleted in new
chr2	33243661	33273711	chr2:33243661-33273711	0	+	33243717	33273711	789624	7	123,168,144,23,100,99,56,	0,9015,13706,15926,19060,19632,29994,
#Partially deleted in new
chr2	33252726	33273746	chr2:33252726-33273746	0	+	33252726	33273746	789624	6	118,228,23,103,99,91,	0,4557,6861,9995,10567,20929,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	33274464	33281261	chr2:33274464-33281261	3	-	33274464	33274464	8553170	3	1685,143,84,	0,6460,6713,
#Partially deleted in new
chr2	33275908	33347409	chr2:33275908-33347409	0	+	33275908	33347409	789624	8	15,120,123,123,123,126,126,43,	0,4130,24542,25613,33525,39235,66929,71458,
#Deleted in new
chr2	33285768	33285887	chr2:33285768-33285887	7	-	33285768	33285768	16724991	1	119,	0,
#Partially deleted in new
chr2	33291483	33309482	chr2:33291483-33309482	0	+	33291483	33291483	8553170	5	304,123,123,123,49,	0,1676,8967,10038,17950,
#Partially deleted in new
chr2	33301529	33363421	chr2:33301529-33363421	0	+	33301529	33363421	789624	7	115,123,126,144,183,87,32,	0,7904,13614,45837,59067,59899,61860,
#Partially deleted in new
chr2	33301631	33317940	chr2:33301631-33317940	0	+	33301631	33301631	8553170	4	13,123,126,243,	0,7802,13512,16066,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	33332897	33333007	chr2:33332897-33333007	7	+	33332897	33332897	16724991	1	110,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	33418515	33418564	chr2:33418515-33418564	3	+	33418515	33418515	5263520	1	49,	0,
#Partially deleted in new
chr2	33436323	33564750	chr2:33436323-33564750	3	+	33515136	33562737	789624	19	268,124,133,197,103,63,132,148,174,117,276,78,117,116,148,37,126,359,2022,	0,11496,75386,78686,80218,83628,84229,85631,87555,88108,90813,97999,102770,107188,113280,119207,121887,122348,126405,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	33436325	33482936	chr2:33436325-33482936	0	+	33436325	33436325	8553170	3	266,124,1754,	0,11494,44857,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	33436412	33511842	chr2:33436412-33511842	0	+	33436412	33436412	8553170	4	179,124,122,133,	0,11407,44770,75297,
#Partially deleted in new
chr2	33436566	33516693	chr2:33436566-33516693	0	+	33436566	33436566	8553170	5	25,124,133,197,152,	0,11253,75143,78443,79975,
#Partially deleted in new
chr2	33458045	33522102	chr2:33458045-33522102	0	+	33515136	33522102	789624	7	85,133,197,103,63,132,148,	0,53664,56964,58496,61906,62507,63909,
#Partially deleted in new
chr2	33476227	33564731	chr2:33476227-33564731	1	+	33515136	33562737	789624	18	480,133,197,103,63,132,148,174,117,276,78,117,116,148,37,126,359,2003,	0,35482,38782,40314,43724,44325,45727,47651,48204,50909,58095,62866,67284,73376,79303,81983,82444,86501,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	33476596	33516788	chr2:33476596-33516788	0	+	33476596	33476596	8553170	4	111,133,197,247,	0,35113,38413,39945,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	33476622	33520009	chr2:33476622-33520009	0	+	33515136	33520009	789624	6	85,122,31,197,103,58,	0,4560,35189,38387,39919,43329,
#Partially deleted in new
chr2	33476648	33520656	chr2:33476648-33520656	0	+	33515136	33520656	789624	6	59,31,197,103,63,104,	0,35163,38361,39893,43303,43904,
#Partially deleted in new
chr2	33476648	33516573	chr2:33476648-33516573	0	+	33515136	33516573	789624	5	59,119,133,197,32,	0,16405,35061,38361,39893,
#Partially deleted in new
chr2	33476648	33520653	chr2:33476648-33520653	0	+	33515136	33520653	789624	6	59,31,197,103,63,101,	0,35163,38361,39893,43303,43904,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	33476664	33482014	chr2:33476664-33482014	0	+	33476664	33476664	8553170	2	43,832,	0,4518,
#Partially deleted in new
chr2	33513874	33564605	chr2:33513874-33564605	1	+	33515136	33562737	789624	17	145,197,103,63,132,148,174,117,276,78,114,116,148,37,126,359,1877,	0,1135,2667,6077,6678,8080,10004,10557,13262,20448,25222,29637,35729,41656,44336,44797,48854,
#Partially deleted in new
chr2	33524429	33530944	chr2:33524429-33530944	0	+	33524429	33524429	8553170	3	119,276,82,	0,2707,6433,
#Partially deleted in new
chr2	33527180	33539349	chr2:33527180-33539349	0	+	33527180	33527180	8553170	3	232,78,256,	0,7142,11913,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	33531724	33540181	chr2:33531724-33540181	0	+	33531724	33531724	8553170	2	2676,1088,	0,7369,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	33539650	33543627	chr2:33539650-33543627	0	+	33539650	33539650	8553170	2	458,116,	0,3861,
#Partially deleted in new
chr2	33555046	33563547	chr2:33555046-33563547	3	-	33555046	33555046	8553170	2	268,70,	0,8431,
#Partially deleted in new
chr2	33583657	33599362	chr2:33583657-33599362	3	-	33584775	33599221	789624	8	1787,168,117,81,185,135,149,194,	0,1872,2904,3582,4677,8422,11831,15511,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	33583661	33589848	chr2:33583661-33589848	0	-	33583661	33583661	8553170	4	1783,168,81,1514,	0,1868,3578,4673,
#Partially deleted in new
chr2	33583669	33599291	chr2:33583669-33599291	1	-	33585478	33599221	789624	7	2028,117,81,185,135,149,123,	0,2892,3570,4665,8410,11819,15499,
#Deleted in new
chr2	33584888	33586869	chr2:33584888-33586869	0	-	33584888	33584888	8553170	3	556,168,308,	0,641,1673,
#Deleted in new
chr2	33585613	33587641	chr2:33585613-33587641	0	-	33585613	33585613	8553170	3	84,117,402,	0,948,1626,
#Partially deleted in new
chr2	33586670	33599284	chr2:33586670-33599284	0	-	33586670	33586670	8553170	5	8,81,135,149,116,	0,569,5409,8818,12498,
#Partially deleted in new
chr2	33591922	33599382	chr2:33591922-33599382	0	-	33591922	33591922	8553170	3	292,149,214,	0,3566,7246,
#Partially deleted in new
chr2	33595486	33599277	chr2:33595486-33599277	0	-	33595486	33599221	789624	2	151,109,	0,3682,
#Deleted in new
chr2	33602040	33602286	chr2:33602040-33602286	7	+	33602040	33602040	16724991	1	246,	0,
#Deleted in new
chr2	33636501	33637425	chr2:33636501-33637425	7	+	33636501	33636501	16724991	1	924,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	33706885	34297753	chr2:33706885-34297753	1	+	33706885	33706885	789624	6	68,66,129,126,104,286,	0,148802,219954,237542,579757,590582,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	33706907	34061047	chr2:33706907-34061047	1	+	33706907	33706907	8553170	7	46,66,103,129,126,178,29,	0,148780,179464,219932,237520,353842,354111,
#Partially deleted in new
chr2	33722720	33727564	chr2:33722720-33727564	7	-	33722720	33722720	16724991	3	150,231,416,	0,562,4428,
#Deleted in new
chr2	33726060	33728207	chr2:33726060-33728207	5	-	33726060	33726060	16724991	1	2147,	0,
#Deleted in new
chr2	33727037	33727988	chr2:33727037-33727988	5	-	33727037	33727037	16724991	1	951,	0,
#Deleted in new
chr2	33839781	33840678	chr2:33839781-33840678	7	-	33839781	33839781	16724991	1	897,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	34067225	34069550	chr2:34067225-34069550	3	+	34067225	34067225	789624	3	78,67,452,	0,988,1873,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	34134370	34220575	chr2:34134370-34220575	3	-	34134370	34134370	8553170	5	2917,73,105,70,224,	0,4605,9841,67340,85981,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	34189812	34722833	chr2:34189812-34722833	3	+	34189812	34189812	8553170	7	29,33,104,53,65,195,835,	0,436,96830,194704,473961,523766,532186,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	34383787	34635340	chr2:34383787-34635340	1	+	34383787	34383787	8553170	3	422,53,92,	0,729,251461,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	34677554	34737468	chr2:34677554-34737468	1	+	34677554	34677554	8553170	6	373,62,195,110,40,148,	0,32897,36024,54893,58092,59766,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	34677578	34722563	chr2:34677578-34722563	1	+	34677578	34677578	789624	3	349,195,565,	0,36000,44420,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	34692289	34694298	chr2:34692289-34694298	1	-	34692289	34692289	8553170	2	196,99,	0,1910,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	34704710	34722119	chr2:34704710-34722119	0	+	34704710	34704710	8553170	3	212,195,121,	0,8868,17288,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	34713589	34738231	chr2:34713589-34738231	1	+	34713589	34713589	8553170	3	184,110,911,	0,18858,23731,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	34731714	34737442	chr2:34731714-34737442	0	+	34731714	34731714	8553170	2	843,122,	0,5606,
#Duplicated in new
chr2	34734974	34737118	chr2:34734974-34737118	3	-	34734974	34734974	8553170	2	133,38,	0,2106,
#Partially deleted in new
chr2	34735077	34737571	chr2:34735077-34737571	0	+	34735077	34735077	8553170	2	609,251,	0,2243,
#Partially deleted in new
chr2	34799849	35163112	chr2:34799849-35163112	1	+	34799849	34799849	8553170	6	50,130,72,82,64,182,	0,31513,359234,359697,362926,363081,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	34809232	34809556	chr2:34809232-34809556	3	-	34809232	34809232	8553170	1	324,	0,
#Partially deleted in new
chr2	34831377	35163965	chr2:34831377-35163965	0	+	34831377	34831377	8553170	6	115,72,82,64,129,165,	0,327706,328169,331398,331553,332423,
#Partially deleted in new
chr2	34831377	35173124	chr2:34831377-35173124	0	+	34831377	34831377	8553170	6	115,72,82,64,129,333,	0,327706,328169,331398,331553,341414,
#Partially deleted in new
chr2	34831377	35173179	chr2:34831377-35173179	0	+	34831377	34831377	8553170	5	115,72,64,129,388,	0,327706,331398,331553,341414,
#Partially deleted in new
chr2	34831377	35160278	chr2:34831377-35160278	2	+	34831377	34831377	8553170	3	115,72,732,	0,327706,328169,
#Partially deleted in new
chr2	34831377	35164242	chr2:34831377-35164242	0	+	34831377	34831377	8553170	6	115,72,82,51,129,115,	0,327706,328169,331411,331553,332750,
#Partially deleted in new
chr2	34831377	35159764	chr2:34831377-35159764	0	+	34831377	34831377	8553170	2	115,681,	0,327706,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	34868393	35174909	chr2:34868393-35174909	1	+	34868393	34868393	8553170	5	97,72,82,64,381,	0,290690,291153,294382,306135,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	34923500	35162821	chr2:34923500-35162821	0	+	34923500	34923500	8553170	5	482,246,72,82,46,	0,3265,235583,236046,239275,
#Deleted in new
chr2	34998272	35000160	chr2:34998272-35000160	3	-	34998272	34998272	8553170	3	232,62,205,	0,688,1683,
#Partially deleted in new
chr2	35037215	35162833	chr2:35037215-35162833	0	+	35037215	35037215	8553170	3	72,72,58,	0,121868,125560,
#Partially deleted in new
chr2	35159083	35173153	chr2:35159083-35173153	1	+	35159083	35159083	8553170	5	72,64,129,172,362,	0,3692,3847,11094,13708,
#Partially deleted in new
chr2	35159146	35172915	chr2:35159146-35172915	1	+	35159146	35159146	8553170	6	9,82,64,129,172,124,	0,400,3629,3784,11031,13645,
#Partially deleted in new
chr2	35159598	35170349	chr2:35159598-35170349	1	+	35159598	35159598	8553170	5	30,64,129,115,172,	0,3177,3332,4529,10579,
#Partially deleted in new
chr2	35162785	35173311	chr2:35162785-35173311	0	+	35162785	35162785	8553170	4	54,129,115,520,	0,145,1342,10006,
#Deleted in new
chr2	35219376	35219604	chr2:35219376-35219604	7	-	35219376	35219376	16724991	1	228,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	35471404	35471486	chr2:35471404-35471486	3	+	35471404	35471404	5263520	1	82,	0,
#Deleted in new
chr2	35471715	35471841	chr2:35471715-35471841	7	+	35471715	35471715	16724991	1	126,	0,
#Deleted in new
chr2	35724758	35725142	chr2:35724758-35725142	7	-	35724758	35724758	16724991	1	384,	0,
#Deleted in new
chr2	36299387	36299830	chr2:36299387-36299830	7	-	36299387	36299387	16724991	1	443,	0,
#Deleted in new
chr2	36354748	36355114	chr2:36354748-36355114	3	-	36354748	36354748	8553170	1	366,	0,
#Partially deleted in new
chr2	36355925	36551135	chr2:36355925-36551135	3	+	36356292	36548701	789624	17	698,174,243,121,122,183,198,129,157,122,210,216,222,195,123,188,2611,	0,40688,85332,86689,108608,120963,123571,143293,154057,156347,157630,161401,166166,181426,188450,191058,192599,
#Partially deleted in new
chr2	36356442	36464655	chr2:36356442-36464655	0	+	36356442	36464655	789624	4	181,243,121,122,	0,84815,86172,108091,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	36356470	36378903	chr2:36356470-36378903	0	+	36356470	36378370	789624	2	153,547,	0,21886,
#Partially deleted in new
chr2	36369114	36379224	chr2:36369114-36379224	0	+	36369114	36369114	8553170	3	135,169,82,	0,9242,10028,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	36378356	36379213	chr2:36378356-36379213	0	+	36378356	36378356	8553170	3	169,71,71,	0,497,786,
#Partially deleted in new
chr2	36378356	36379213	chr2:36378356-36379213	0	+	36378356	36378356	8553170	2	169,71,	0,786,
#Partially deleted in new
chr2	36479542	36499412	chr2:36479542-36499412	0	+	36479542	36479542	8553170	2	152,194,	0,19676,
#Deleted in new
chr2	36513254	36513732	chr2:36513254-36513732	3	-	36513254	36513254	8553170	1	478,	0,
#Partially deleted in new
chr2	36513689	36529512	chr2:36513689-36529512	0	+	36513689	36529166	789624	4	76,216,222,360,	0,3637,8402,15463,
#Partially deleted in new
chr2	36531804	36552268	chr2:36531804-36552268	0	-	36531804	36531804	8553170	2	217,213,	0,20251,
#Partially deleted in new
chr2	36551426	36578832	chr2:36551426-36578832	0	-	36552130	36578832	789624	5	65,113,66,76,236,	0,629,4256,7011,27170,
#Partially deleted in new
chr2	36552257	36598191	chr2:36552257-36598191	3	-	36553162	36598142	789624	9	922,66,76,81,269,142,117,109,315,	0,3425,6180,8527,26339,29032,31095,38645,45619,
#Partially deleted in new
chr2	36552257	36581327	chr2:36552257-36581327	0	-	36553162	36581327	789624	6	922,66,84,76,269,38,	0,3425,3719,6180,26339,29032,
#Deleted in new
chr2	36552257	36559255	chr2:36552257-36559255	0	-	36552257	36552257	8553170	2	922,3573,	0,3425,
#Partially deleted in new
chr2	36552262	36591011	chr2:36552262-36591011	1	-	36553162	36581410	789624	8	917,66,76,269,142,86,117,109,	0,3420,6175,26334,29027,29242,31090,38640,
#Partially deleted in new
chr2	36552293	36598142	chr2:36552293-36598142	1	-	36553162	36598142	789624	8	886,66,76,269,142,117,109,266,	0,3389,6144,26303,28996,31059,38609,45583,
#Partially deleted in new
chr2	36552303	36598166	chr2:36552303-36598166	0	-	36555733	36598142	789624	7	876,66,269,142,117,109,290,	0,3379,26293,28986,31049,38599,45573,
#Deleted in new
chr2	36552710	36560845	chr2:36552710-36560845	0	-	36554254	36560845	789624	5	469,93,66,76,61,	0,1459,2972,5727,8074,
#Deleted in new
chr2	36552782	36561498	chr2:36552782-36561498	0	-	36552782	36552782	8553170	5	397,66,76,81,161,	0,2900,5655,8002,8555,
#Partially deleted in new
chr2	36552946	36579090	chr2:36552946-36579090	0	-	36552946	36552946	8553170	5	233,66,76,269,133,	0,2736,5491,25650,26011,
#Deleted in new
chr2	36555288	36558637	chr2:36555288-36558637	0	-	36555288	36555288	8553170	2	460,200,	0,3149,
#Partially deleted in new
chr2	36555682	36584058	chr2:36555682-36584058	0	-	36555682	36555682	8553170	6	66,76,269,142,117,29,	0,2755,22914,25607,27670,28347,
#Partially deleted in new
chr2	36555687	36646087	chr2:36555687-36646087	0	-	36555687	36590974	789624	7	61,76,269,142,117,109,73,	0,2750,22909,25602,27665,35215,90327,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	36589640	36591553	chr2:36589640-36591553	0	-	36589640	36589640	8553170	1	1913,	0,
#Deleted in new
chr2	36656321	36656941	chr2:36656321-36656941	7	-	36656321	36656321	16724991	1	620,	0,
#Partially deleted in new
chr2	36696689	36814787	chr2:36696689-36814787	3	+	36716370	36814361	789624	16	284,70,66,157,134,78,192,57,66,45,63,148,104,227,514,605,	0,19663,32736,46410,58231,62279,70404,77101,78312,85037,86650,90439,104611,108748,111782,117493,
#Partially deleted in new
chr2	36696689	36814792	chr2:36696689-36814792	1	+	36716370	36814361	789624	15	284,70,66,157,134,78,192,57,66,63,148,104,227,514,610,	0,19663,32736,46410,58231,62279,70404,77101,78312,86650,90439,104611,108748,111782,117493,
#Partially deleted in new
chr2	36696763	36759675	chr2:36696763-36759675	1	+	36716370	36759171	789624	6	210,70,66,157,134,707,	0,19589,32662,46336,58157,62205,
#Partially deleted in new
chr2	36696804	36814787	chr2:36696804-36814787	1	+	36787256	36814361	789624	15	169,70,66,157,134,78,192,57,66,63,148,104,227,514,605,	0,19548,32621,46295,58116,62164,70289,76986,78197,86535,90324,104496,108633,111667,117378,
#Partially deleted in new
chr2	36696825	36814740	chr2:36696825-36814740	1	+	36716370	36814361	789624	13	148,70,157,134,78,192,45,63,148,104,227,514,558,	0,19527,46274,58095,62143,70268,84901,86514,90303,104475,108612,111646,117357,
#Partially deleted in new
chr2	36696865	36814789	chr2:36696865-36814789	1	+	36716370	36814361	789624	14	108,70,66,157,134,78,192,57,63,148,104,227,514,607,	0,19487,32560,46234,58055,62103,70228,76925,86474,90263,104435,108572,111606,117317,
#Partially deleted in new
chr2	36696876	36814433	chr2:36696876-36814433	1	+	36716370	36814361	789624	14	97,70,66,157,134,78,192,57,66,148,104,227,514,251,	0,19476,32549,46223,58044,62092,70217,76914,78125,90252,104424,108561,111595,117306,
#Partially deleted in new
chr2	36773811	36788054	chr2:36773811-36788054	0	+	36773811	36787879	789624	5	36,66,63,148,266,	0,1190,9528,13317,13977,
#Deleted in new
chr2	36839921	36842539	chr2:36839921-36842539	3	-	36839921	36839921	8553170	1	2618,	0,
#Partially deleted in new
chr2	36843639	36966472	chr2:36843639-36966472	3	-	36849455	36966463	789624	18	5986,87,108,141,168,122,48,176,137,144,111,136,136,168,79,74,104,243,	0,6074,7360,11572,14216,17492,24174,25914,34251,40292,43076,50258,55883,58944,61900,72438,81465,122590,
#Partially deleted in new
chr2	36849405	36966471	chr2:36849405-36966471	1	-	36849455	36966463	789624	18	220,87,108,141,168,122,48,176,137,144,136,136,168,79,74,104,116,90,	0,308,1594,5806,8450,11726,18408,20148,28485,34526,44492,50117,53178,56134,66672,75699,116824,116976,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	36867397	36867495	chr2:36867397-36867495	3	-	36867397	36867397	8553170	1	98,	0,
#Partially deleted in new
chr2	36869702	36902928	chr2:36869702-36902928	0	-	36869702	36869702	8553170	7	27,137,134,111,136,136,345,	0,8188,14229,17013,24195,29820,32881,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	36968382	36988859	chr2:36968382-36988859	0	-	36968467	36988859	789624	2	219,214,	0,20263,
#Partially deleted in new
chr2	36980896	37084342	chr2:36980896-37084342	3	-	36981489	37083414	789624	36	898,214,152,228,267,145,128,255,238,180,69,182,252,240,145,170,190,160,191,106,176,164,110,100,153,112,251,156,250,158,172,150,109,212,148,74,	0,7749,9751,19689,21409,22645,24735,26153,27714,32944,38912,39758,47026,47784,51732,56958,59432,60236,68756,72605,75543,76420,77554,77991,79684,81042,83843,84858,87784,89333,91213,94588,96014,98223,102392,103372,
#Partially deleted in new
chr2	37008167	37013995	chr2:37008167-37013995	0	-	37008167	37008167	8553170	2	681,155,	0,5673,
#Partially deleted in new
chr2	37041023	37056484	chr2:37041023-37056484	0	-	37041023	37041023	8553170	4	269,191,106,45,	0,8629,12478,15416,
#Partially deleted in new
chr2	37072211	37076164	chr2:37072211-37076164	0	-	37072211	37072211	8553170	2	70,680,	0,3273,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	37084450	37099244	chr2:37084450-37099244	3	+	37084517	37096263	789624	9	120,72,227,42,121,91,114,82,3037,	0,3918,5189,6230,7465,7714,9631,10986,11757,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	37084517	37099244	chr2:37084517-37099244	1	+	37088433	37096263	789624	7	53,72,121,91,114,82,3037,	0,3851,7398,7647,9564,10919,11690,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	37088363	37094324	chr2:37088363-37094324	0	+	37088363	37088363	8553170	4	77,121,91,243,	0,3552,3801,5718,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	37099209	37157047	chr2:37099209-37157047	3	-	37107272	37147806	0	17	8186,54,102,129,181,159,123,63,35,94,77,127,149,121,135,167,140,	0,8264,9984,15521,20749,23296,27079,36274,37773,39060,39299,40421,42343,47643,48478,49647,57698,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr2	37101934	37148988	chr2:37101934-37148988	0	-	37107272	37147806	8553170	18	298,118,138,54,102,129,181,159,123,63,35,94,77,127,149,121,135,132,	0,2080,5323,5539,7259,12796,18024,20571,24354,33549,35048,36335,36574,37696,39618,44918,45753,46922,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	37105142	37157047	chr2:37105142-37157047	1	-	37107272	37147806	0	17	2253,54,102,129,181,159,123,63,35,94,77,127,149,121,135,401,140,	0,2331,4051,9588,14816,17363,21146,30341,31840,33127,33366,34488,36410,41710,42545,43714,51765,
#Partially deleted in new
chr2	37107272	37147806	chr2:37107272-37147806	1	-	37107272	37147806	0	14	123,54,102,129,181,159,63,35,94,77,127,149,121,119,	0,201,1921,7458,12686,15233,28211,29710,30997,31236,32358,34280,39580,40415,
#Partially deleted in new
chr2	37107345	37109500	chr2:37107345-37109500	0	-	37107345	37107345	8553170	3	50,54,307,	0,128,1848,
#Partially deleted in new
chr2	37136728	37146961	chr2:37136728-37146961	0	-	37136728	37136728	8553170	6	289,94,77,127,149,109,	0,1541,1780,2902,4824,10124,
#Partially deleted in new
chr2	37139723	37157032	chr2:37139723-37157032	0	-	37139723	37147806	789624	6	34,149,121,135,59,125,	0,1829,7129,7964,9133,17184,
#Partially deleted in new
chr2	37141634	37157065	chr2:37141634-37157065	0	-	37141634	37147806	789624	5	67,121,135,83,158,	0,5218,6053,7222,15273,
#Deleted in new
chr2	37148529	37149304	chr2:37148529-37149304	7	+	37148529	37148529	16724991	1	775,	0,
#Partially deleted in new
chr2	37167819	37188640	chr2:37167819-37188640	3	-	37167934	37188640	789624	7	246,157,95,127,90,113,199,	0,3614,7312,11638,15605,19535,20622,
#Partially deleted in new
chr2	37167934	37196598	chr2:37167934-37196598	1	-	37167934	37188526	789624	8	131,157,95,127,90,113,106,83,	0,3499,7197,11523,15490,19420,20507,28581,
#Partially deleted in new
chr2	37188476	37189945	chr2:37188476-37189945	0	-	37188476	37188526	789624	2	71,63,	0,1406,
#Partially deleted in new
chr2	37188476	37196573	chr2:37188476-37196573	0	-	37188476	37188526	789624	3	71,33,58,	0,2744,8039,
#Deleted in new
chr2	37194381	37194737	chr2:37194381-37194737	7	-	37194381	37194381	16724991	1	356,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	37196487	37213725	chr2:37196487-37213725	3	+	37199704	37201724	789624	5	33,116,45,85,289,	0,3216,4560,5154,16949,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	37196487	37204741	chr2:37196487-37204741	1	+	37199704	37201724	789624	5	33,116,45,85,2879,	0,3216,4560,5154,5375,
#Partially deleted in new
chr2	37196493	37201704	chr2:37196493-37201704	0	+	37196493	37196493	8553170	3	27,116,657,	0,3210,4554,
#Partially deleted in new
chr2	37196504	37203495	chr2:37196504-37203495	1	+	37199704	37201724	789624	6	16,179,116,45,85,246,	0,1989,3199,4543,5137,6745,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	37196507	37204739	chr2:37196507-37204739	1	+	37199704	37201724	789624	5	13,116,45,85,436,	0,3196,4540,5134,7796,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	37196522	37202692	chr2:37196522-37202692	1	+	37199704	37201724	789624	7	147,97,179,116,45,85,830,	0,731,1971,3181,4525,5119,5340,
#Partially deleted in new
chr2	37201611	37231713	chr2:37201611-37231713	3	-	37201763	37231567	789624	16	292,82,59,84,197,58,98,67,69,103,54,89,184,232,1493,302,	0,1172,1338,9387,10231,10723,12252,13274,14528,14704,15372,18773,20768,21558,25932,29800,
#Partially deleted in new
chr2	37201783	37212108	chr2:37201783-37212108	0	-	37201783	37201783	8553170	5	120,82,59,84,266,	0,1000,1166,9215,10059,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	37208874	37212677	chr2:37208874-37212677	3	+	37208874	37208874	8553170	1	3803,	0,
#Partially deleted in new
chr2	37228607	37231369	chr2:37228607-37231369	0	-	37228607	37231281	789624	2	429,97,	0,2665,
#Partially deleted in new
chr2	37231630	37247576	chr2:37231630-37247576	0	+	37231705	37241615	789624	9	130,161,81,79,60,59,111,144,121,	0,475,4465,6126,9947,11004,12232,14421,15825,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	37231662	37249160	chr2:37231662-37249160	0	+	37231662	37231662	8553170	9	98,161,81,111,1116,63,144,174,1026,	0,443,4433,6094,9915,12248,14389,15793,16472,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	37231665	37249160	chr2:37231665-37249160	3	+	37231705	37248350	789624	10	95,161,81,111,214,59,111,144,174,1026,	0,440,4430,6091,9912,10969,12197,14386,15790,16469,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	37231678	37249160	chr2:37231678-37249160	1	+	37231705	37248350	789624	8	82,161,111,60,111,144,174,1026,	0,427,6078,9899,12184,14373,15777,16456,
#Partially deleted in new
chr2	37231688	37246186	chr2:37231688-37246186	0	+	37236116	37246186	789624	7	72,81,111,214,59,111,135,	0,4407,6068,9889,10946,12174,14363,
#Partially deleted in new
chr2	37231766	37241628	chr2:37231766-37241628	0	+	37232176	37241628	789624	5	69,161,81,111,51,	0,339,4329,5990,9811,
#Partially deleted in new
chr2	37231766	37241956	chr2:37231766-37241956	0	+	37231766	37231766	8553170	5	113,161,81,111,379,	0,339,4329,5990,9811,
#Partially deleted in new
chr2	37231775	37246195	chr2:37231775-37246195	0	+	37231775	37231775	8553170	6	104,79,214,59,111,144,	0,5981,9802,10859,12087,14276,
#Partially deleted in new
chr2	37231819	37246188	chr2:37231819-37246188	0	+	37232176	37246188	789624	8	60,161,81,111,214,59,111,137,	0,286,4276,5937,9758,10815,12043,14232,
#Partially deleted in new
chr2	37231841	37241739	chr2:37231841-37241739	0	+	37232176	37241739	789624	5	148,161,81,111,162,	0,264,4254,5915,9736,
#Partially deleted in new
chr2	37241938	37248420	chr2:37241938-37248420	0	+	37241938	37241938	8553170	5	755,111,144,174,286,	0,1924,4113,5517,6196,
#Deleted in new
chr2	37243920	37248387	chr2:37243920-37248387	0	+	37243920	37243920	8553170	5	53,144,56,174,253,	0,2131,3392,3535,4214,
#Partially deleted in new
chr2	37247455	37253403	chr2:37247455-37253403	0	+	37247455	37248350	789624	3	174,169,318,	0,802,5630,
#Partially deleted in new
chr2	37250501	37317894	chr2:37250501-37317894	3	-	37253176	37316524	0	19	2849,86,268,99,162,107,73,53,277,78,124,184,78,193,158,132,139,943,108,	0,3702,6160,9081,9721,16928,19113,21878,23919,25265,27364,29244,32040,35675,38854,40366,42631,65735,67285,
#Partially deleted in new
chr2	37250504	37317079	chr2:37250504-37317079	1	-	37253176	37316524	0	18	2846,86,268,99,162,107,73,53,277,78,124,184,78,193,158,132,139,843,	0,3699,6157,9078,9718,16925,19110,21875,23916,25262,27361,29241,32037,35672,38851,40363,42628,65732,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	37256661	37279390	chr2:37256661-37279390	0	-	37256661	37256661	8553170	9	268,99,162,107,73,53,277,78,1525,	0,2921,3561,10768,12953,15718,17759,19105,21204,
#Partially deleted in new
chr2	37256697	37272423	chr2:37256697-37272423	0	-	37256697	37272423	789624	5	232,99,107,73,44,	0,2885,10732,12917,15682,
#Partially deleted in new
chr2	37260355	37274604	chr2:37260355-37274604	0	-	37260355	37274604	789624	6	29,107,72,73,53,184,	0,7074,7945,9259,12024,14065,
#Partially deleted in new
chr2	37267564	37317023	chr2:37267564-37317023	0	-	37267564	37267564	8553170	12	2123,53,277,78,124,184,78,193,158,132,139,787,	0,4815,6856,8202,10301,12181,14977,18612,21791,23303,25568,48672,
#Partially deleted in new
chr2	37282305	37290962	chr2:37282305-37290962	0	-	37282305	37282305	8553170	4	314,193,158,95,	0,3871,7050,8562,
#Partially deleted in new
chr2	37286231	37324808	chr2:37286231-37324808	0	-	37286231	37293247	789624	5	138,158,132,139,128,	0,3124,4636,6901,38449,
#Partially deleted in new
chr2	37292987	37316388	chr2:37292987-37316388	0	-	37292987	37292987	8553170	2	284,152,	0,23249,
#Partially deleted in new
chr2	37316813	37324370	chr2:37316813-37324370	0	-	37316813	37316813	8553170	2	366,173,	0,7384,
#Partially deleted in new
chr2	37325339	37326797	chr2:37325339-37326797	3	+	37325339	37325339	8553170	2	183,321,	0,1137,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	37331769	37331876	chr2:37331769-37331876	3	-	37331769	37331769	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	37339956	37343796	chr2:37339956-37343796	3	-	37339956	37339956	8553170	2	771,70,	0,3770,
#Partially deleted in new
chr2	37342826	37367290	chr2:37342826-37367290	0	+	37352860	37367290	8553170	4	97,147,279,59,	0,9962,16753,24405,
#Partially deleted in new
chr2	37344573	37373322	chr2:37344573-37373322	3	+	37344731	37372827	0	7	278,147,279,177,100,117,641,	0,8215,15006,22658,25111,27782,28108,
#Partially deleted in new
chr2	37344593	37372742	chr2:37344593-37372742	0	+	37344731	37372742	789624	6	258,279,177,100,117,61,	0,14986,22638,25091,27762,28088,
#Partially deleted in new
chr2	37344727	37360053	chr2:37344727-37360053	0	+	37344727	37344727	8553170	4	124,147,68,474,	0,8061,14093,14852,
#Partially deleted in new
chr2	37358711	37369702	chr2:37358711-37369702	0	+	37358711	37358711	8553170	4	177,279,177,18,	0,868,8520,10973,
#Partially deleted in new
chr2	37367122	37373030	chr2:37367122-37373030	0	+	37367122	37367122	8553170	4	286,100,117,349,	0,2562,5233,5559,
#Partially deleted in new
chr2	37368280	37372799	chr2:37368280-37372799	0	+	37368641	37372799	789624	4	379,100,117,118,	0,1404,4075,4401,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	37435509	37435608	chr2:37435509-37435608	3	-	37435509	37435509	8553170	1	99,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	37600135	37646698	chr2:37600135-37646698	3	+	37600135	37600135	8553170	5	227,86,187,25,23,	0,12037,42605,44281,46540,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	37641881	37672535	chr2:37641881-37672535	3	-	37645822	37646587	789624	2	4941,183,	0,30471,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	37641888	37672191	chr2:37641888-37672191	1	-	37645822	37646587	789624	2	4934,766,	0,29537,
#Partially deleted in new
chr2	37645940	37672199	chr2:37645940-37672199	0	-	37645940	37646587	789624	2	882,115,	0,26144,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	37646545	37647658	chr2:37646545-37647658	0	-	37646545	37646587	789624	2	277,265,	0,848,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	37684482	37688849	chr2:37684482-37688849	0	-	37684482	37684482	8553170	2	3693,33,	0,4334,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	37744332	37747046	chr2:37744332-37747046	3	+	37744332	37744332	8553170	2	311,73,	0,2641,
#Deleted in new
chr2	37816914	37817961	chr2:37816914-37817961	7	+	37816914	37816914	16724991	1	1047,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	37826246	37829432	chr2:37826246-37829432	1	-	37826246	37826246	789624	3	1632,106,185,	0,2686,3001,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	37827608	37875863	chr2:37827608-37875863	3	-	37827608	37827608	789624	4	270,106,165,121,	0,1324,37505,48134,
#Partially deleted in new
chr2	37840037	37876274	chr2:37840037-37876274	0	-	37840037	37840037	8553170	3	222,165,164,	0,25076,36073,
#Partially deleted in new
chr2	37923186	37974114	chr2:37923186-37974114	0	+	37929277	37974114	789624	3	181,468,75,	0,6075,50853,
#Partially deleted in new
chr2	37925318	38017264	chr2:37925318-38017264	3	+	37929277	38017239	789624	11	107,468,175,103,61,76,78,99,54,81,79,	0,3943,48721,49893,55964,64222,65901,72097,78672,78817,91867,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	37925346	37998363	chr2:37925346-37998363	0	+	37929277	37950541	789624	9	79,468,85,175,103,61,76,78,948,	0,3915,25164,48693,49865,55936,64194,65873,72069,
#Partially deleted in new
chr2	37928758	38017744	chr2:37928758-38017744	1	+	37929277	38017239	789624	11	178,468,175,103,61,76,78,99,54,81,559,	0,503,45281,46453,52524,60782,62461,68657,75232,75377,88427,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	37949910	38039327	chr2:37949910-38039327	1	-	37949910	37949910	8553170	7	627,102,66,141,61,41,15,	0,13181,79944,86239,86673,86826,89402,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	37949976	38036189	chr2:37949976-38036189	1	-	37949976	37949976	8553170	4	561,98,66,40,	0,13119,79878,86173,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	37950226	37976365	chr2:37950226-37976365	3	-	37950226	37950226	8553170	3	311,98,39,	0,12869,26100,
#Partially deleted in new
chr2	37950431	38017558	chr2:37950431-38017558	1	+	37950578	38012605	789624	12	164,969,175,103,61,76,78,99,54,81,47,373,	0,801,23608,24780,30851,39109,40788,46984,53559,53704,62171,66754,
#Partially deleted in new
chr2	37950452	38017741	chr2:37950452-38017741	1	+	37950578	38017239	789624	10	143,175,103,61,76,78,99,54,81,556,	0,23587,24759,30830,39088,40767,46963,53538,53683,66733,
#Partially deleted in new
chr2	37950462	38067137	chr2:37950462-38067137	1	+	37950578	38066990	789624	11	133,969,175,103,61,76,78,99,54,81,156,	0,770,23577,24749,30820,39078,40757,46953,53528,53673,116519,
#Partially deleted in new
chr2	37950463	38004187	chr2:37950463-38004187	0	+	37950578	38004187	789624	9	132,175,103,61,76,78,99,54,52,	0,23576,24748,30819,39077,40756,46952,53527,53672,
#Deleted in new
chr2	37950500	37953110	chr2:37950500-37953110	1	+	37950578	37952292	789624	2	95,1878,	0,732,
#Partially deleted in new
chr2	37974690	37989610	chr2:37974690-37989610	0	+	37974690	37974690	8553170	3	624,61,70,	0,6592,14850,
#Partially deleted in new
chr2	37989546	38017727	chr2:37989546-38017727	0	+	37989546	38017596	789624	7	70,78,99,54,81,50,150,	0,1673,7869,14444,14589,27639,28031,
#Partially deleted in new
chr2	38002867	38067142	chr2:38002867-38067142	0	+	38002867	38002867	8553170	4	159,54,81,161,	0,1123,1268,64114,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	38029345	38036267	chr2:38029345-38036267	0	-	38029345	38029345	8553170	2	575,118,	0,6804,
#Partially deleted in new
chr2	38030224	38036290	chr2:38030224-38036290	0	-	38030224	38030224	8553170	2	250,141,	0,5925,
#Partially deleted in new
chr2	38030424	38036267	chr2:38030424-38036267	0	-	38030424	38030424	8553170	3	50,139,118,	0,262,5725,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	38032868	38036297	chr2:38032868-38036297	0	-	38032868	38032868	8553170	2	342,148,	0,3281,
#Partially deleted in new
chr2	38035887	38067041	chr2:38035887-38067041	1	-	38035887	38035887	8553170	3	403,61,149,	0,696,31005,
#Deleted in new
chr2	38066972	38070697	chr2:38066972-38070697	0	-	38066972	38066972	8553170	3	105,96,88,	0,2205,3637,
#Partially deleted in new
chr2	38067506	38076181	chr2:38067506-38076181	3	-	38070721	38075388	0	3	3804,1044,402,	0,6839,8273,
#Partially deleted in new
chr2	38070065	38109902	chr2:38070065-38109902	1	-	38070721	38071240	789624	2	1245,234,	0,39603,
#Partially deleted in new
chr2	38070481	38076076	chr2:38070481-38076076	1	-	38070721	38075388	0	3	829,1044,301,	0,3864,5294,
#Partially deleted in new
chr2	38070986	38073936	chr2:38070986-38073936	0	-	38070986	38070986	8553170	2	324,421,	0,2529,
#Partially deleted in new
chr2	38071175	38076154	chr2:38071175-38076154	0	-	38071175	38071175	8553170	3	135,63,375,	0,3170,4604,
#Duplicated in new
chr2	38073446	38131567	chr2:38073446-38131567	0	+	38073446	38073446	8553170	6	44,72,78,143,241,57,	0,860,9626,27477,48538,58064,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	38073446	38131567	chr2:38073446-38131567	0	+	38073446	38073446	8553170	5	44,121,143,241,57,	0,860,27477,48538,58064,
#Partially deleted in new
chr2	38074872	38181828	chr2:38074872-38181828	1	+	38074872	38074872	8553170	4	303,241,104,1540,	0,47112,56638,105416,
#Deleted in new
chr2	38074958	38076154	chr2:38074958-38076154	0	-	38074958	38075388	789624	2	431,136,	0,1060,
#Partially deleted in new
chr2	38075647	38151380	chr2:38075647-38151380	1	+	38075647	38075647	8553170	3	421,104,29,	0,55863,75704,
#Partially deleted in new
chr2	38075666	38131567	chr2:38075666-38131567	0	+	38075666	38075666	8553170	4	402,241,271,57,	0,46318,55253,55844,
#Partially deleted in new
chr2	38075699	38202770	chr2:38075699-38202770	0	+	38075699	38075699	8553170	3	369,104,263,	0,55811,126808,
#Partially deleted in new
chr2	38075699	38095392	chr2:38075699-38095392	0	+	38075699	38075699	8553170	2	369,280,	0,19413,
#Partially deleted in new
chr2	38075699	38202714	chr2:38075699-38202714	0	+	38075699	38075699	8553170	4	90,241,104,207,	0,46285,55811,126808,
#Partially deleted in new
chr2	38075699	38231651	chr2:38075699-38231651	0	+	38075699	38075699	8553170	3	369,104,92,	0,55811,155860,
#Partially deleted in new
chr2	38075699	38147966	chr2:38075699-38147966	0	+	38075699	38075699	8553170	4	369,241,104,150,	0,46285,55811,72117,
#Partially deleted in new
chr2	38076265	38131567	chr2:38076265-38131567	0	+	38076265	38076265	8553170	4	295,241,271,57,	0,45719,54654,55245,
#Partially deleted in new
chr2	38076279	38131567	chr2:38076279-38131567	1	+	38076279	38076279	8553170	3	281,241,57,	0,45705,55231,
#Duplicated in new
chr2	38082471	38131587	chr2:38082471-38131587	0	+	38082471	38082471	8553170	3	65,241,77,	0,39513,49039,
#Duplicated in new
chr2	38082697	38131567	chr2:38082697-38131567	0	+	38082697	38082697	8553170	3	44,115,57,	0,1298,48813,
#Duplicated in new
chr2	38083017	38131567	chr2:38083017-38131567	0	+	38083017	38083017	8553170	3	133,241,57,	0,38967,48493,
#Duplicated in new
chr2	38083053	38131567	chr2:38083053-38131567	0	+	38083053	38083053	8553170	3	97,115,57,	0,942,48457,
#Duplicated in new
chr2	38083075	38131567	chr2:38083075-38131567	0	+	38083075	38083075	8553170	4	75,143,241,57,	0,17848,38909,48435,
#Duplicated in new
chr2	38083094	38131567	chr2:38083094-38131567	0	+	38083094	38083094	8553170	5	56,115,143,241,57,	0,901,17829,38890,48416,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	38083772	38131561	chr2:38083772-38131561	0	+	38083772	38083772	8553170	4	338,143,241,51,	0,17151,38212,47738,
#Partially deleted in new
chr2	38098579	38131576	chr2:38098579-38131576	1	+	38098579	38098579	8553170	3	177,241,66,	0,23405,32931,
#Partially deleted in new
chr2	38098727	38131565	chr2:38098727-38131565	0	+	38098727	38098727	8553170	5	33,143,147,241,55,	0,2196,14633,23257,32783,
#Partially deleted in new
chr2	38098727	38131563	chr2:38098727-38131563	0	+	38098727	38098727	8553170	6	33,143,147,241,271,53,	0,2196,14633,23257,32192,32783,
#Partially deleted in new
chr2	38100602	38131590	chr2:38100602-38131590	0	+	38100602	38100602	8553170	4	143,143,241,80,	0,321,21382,30908,
#Partially deleted in new
chr2	38100633	38131590	chr2:38100633-38131590	0	+	38100633	38100633	8553170	5	112,143,147,241,80,	0,290,12727,21351,30877,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	38105165	38131590	chr2:38105165-38131590	0	+	38105165	38105165	8553170	3	452,39,80,	0,17021,26345,
#Partially deleted in new
chr2	38115440	38131567	chr2:38115440-38131567	0	+	38115440	38115440	8553170	4	186,241,271,57,	0,6544,15479,16070,
#Partially deleted in new
chr2	38115440	38131567	chr2:38115440-38131567	2	+	38115440	38115440	8553170	3	186,241,57,	0,6544,16070,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	38118897	38131567	chr2:38118897-38131567	0	+	38118897	38118897	8553170	3	128,241,57,	0,3087,12613,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	38118897	38131588	chr2:38118897-38131588	0	+	38118897	38118897	8553170	4	128,241,271,78,	0,3087,12022,12613,
#Partially deleted in new
chr2	38121173	38131590	chr2:38121173-38131590	0	+	38121173	38121173	8553170	3	349,241,80,	0,811,10337,
#Partially deleted in new
chr2	38121635	38131590	chr2:38121635-38131590	0	+	38121635	38121635	8553170	2	590,80,	0,9875,
#Partially deleted in new
chr2	38121775	38131590	chr2:38121775-38131590	0	+	38121775	38121775	8553170	3	115,241,80,	0,209,9735,
#Deleted in new
chr2	38121934	38123881	chr2:38121934-38123881	3	-	38121934	38121934	8553170	1	1947,	0,
#Partially deleted in new
chr2	38121984	38131590	chr2:38121984-38131590	0	+	38121984	38121984	8553170	3	241,271,80,	0,8935,9526,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	38147414	38147521	chr2:38147414-38147521	3	+	38147414	38147414	8553170	1	107,	0,
#Deleted in new
chr2	38193347	38193629	chr2:38193347-38193629	3	+	38193347	38193347	8553170	1	282,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	38203362	38239590	chr2:38203362-38239590	3	-	38203362	38203362	8553170	2	89,533,	0,35695,
#Deleted in new
chr2	38231567	38232317	chr2:38231567-38232317	7	+	38231567	38231567	16724991	1	750,	0,
#Deleted in new
chr2	38285409	38286410	chr2:38285409-38286410	7	+	38285409	38285409	16724991	1	1001,	0,
#Partially deleted in new
chr2	38294879	38377262	chr2:38294879-38377262	1	-	38295993	38377260	789624	13	1234,432,72,57,128,139,93,57,51,105,135,245,120,	0,3264,4376,5392,14499,15429,18271,19728,20404,23655,24005,48388,82263,
#Partially deleted in new
chr2	38295153	38377285	chr2:38295153-38377285	1	-	38296482	38318624	789624	13	1437,15,432,72,57,128,139,93,57,51,105,135,143,	0,1532,2990,4102,5118,14225,15155,17997,19454,20130,23381,23731,81989,
#Partially deleted in new
chr2	38295608	38376224	chr2:38295608-38376224	1	-	38295993	38318624	789624	12	505,432,72,57,128,139,93,57,51,105,135,109,	0,2535,3647,4663,13770,14700,17542,18999,19675,22926,23276,80507,
#Partially deleted in new
chr2	38295608	38377273	chr2:38295608-38377273	0	-	38318987	38377260	789624	12	505,432,72,57,128,139,93,57,51,105,135,131,	0,2535,3647,4663,13770,14700,17542,18999,19675,22926,23276,81534,
#Partially deleted in new
chr2	38295900	38377273	chr2:38295900-38377273	3	-	38296482	38377260	789624	13	690,432,72,57,128,139,93,57,51,105,135,245,131,	0,2243,3355,4371,13478,14408,17250,18707,19383,22634,22984,47367,81242,
#Partially deleted in new
chr2	38295907	38376594	chr2:38295907-38376594	1	-	38295993	38376179	789624	13	206,432,72,57,128,139,93,57,51,105,135,245,479,	0,2236,3348,4364,13471,14401,17243,18700,19376,22627,22977,47360,80208,
#Partially deleted in new
chr2	38296482	38318624	chr2:38296482-38318624	1	-	38296482	38318624	789624	11	108,15,432,72,57,128,139,93,57,51,90,	0,203,1661,2773,3789,12896,13826,16668,18125,18801,22052,
#Deleted in new
chr2	38297930	38300318	chr2:38297930-38300318	0	-	38297930	38297930	8553170	3	645,72,47,	0,1325,2341,
#Deleted in new
chr2	38298217	38300433	chr2:38298217-38300433	0	-	38298217	38298217	8553170	3	358,72,162,	0,1038,2054,
#Partially deleted in new
chr2	38309378	38377261	chr2:38309378-38377261	0	-	38309378	38377260	789624	5	128,139,93,47,119,	0,930,3772,5229,67764,
#Partially deleted in new
chr2	38309430	38377256	chr2:38309430-38377256	0	-	38309430	38377256	789624	7	76,139,93,57,51,245,114,	0,878,3720,5177,5853,33837,67712,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	38318325	38343415	chr2:38318325-38343415	0	-	38318325	38318325	8553170	3	314,135,148,	0,559,24942,
#Partially deleted in new
chr2	38318834	38377273	chr2:38318834-38377273	0	-	38318834	38318834	8553170	3	185,245,131,	0,24433,58308,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	38406718	38417927	chr2:38406718-38417927	0	-	38406718	38406718	8553170	2	271,152,	0,11057,
#Partially deleted in new
chr2	38431293	38433573	chr2:38431293-38433573	3	+	38431293	38431293	789624	2	145,235,	0,2045,
#Partially deleted in new
chr2	38458636	38463114	chr2:38458636-38463114	0	-	38458636	38458636	8553170	2	239,212,	0,4266,
#Partially deleted in new
chr2	38458642	38483093	chr2:38458642-38483093	1	-	38458642	38458642	8553170	4	233,69,198,135,	0,4260,10601,24316,
#Partially deleted in new
chr2	38458645	38469441	chr2:38458645-38469441	0	-	38458645	38458645	8553170	2	230,198,	0,10598,
#Deleted in new
chr2	38481850	38482804	chr2:38481850-38482804	7	+	38481850	38481850	16724991	1	954,	0,
#Deleted in new
chr2	38535257	38535695	chr2:38535257-38535695	5	-	38535257	38535257	16724991	1	438,	0,
#Deleted in new
chr2	38535567	38536249	chr2:38535567-38536249	7	-	38535567	38535567	16724991	2	192,378,	0,304,
#Partially deleted in new
chr2	38561977	38603029	chr2:38561977-38603029	1	-	38564181	38602867	789624	14	2260,99,58,202,122,218,72,73,97,86,238,119,163,173,	0,6221,6408,7155,7826,11232,15483,19935,20094,21863,23666,29552,40460,40879,
#Partially deleted in new
chr2	38561977	38602966	chr2:38561977-38602966	3	-	38564181	38602626	789624	13	2260,99,58,202,122,218,72,73,97,86,238,119,529,	0,6221,6408,7155,7826,11232,15483,19935,20094,21863,23666,29552,40460,
#Partially deleted in new
chr2	38563185	38603036	chr2:38563185-38603036	1	-	38564181	38602867	789624	14	1052,99,58,202,122,218,72,73,102,81,238,119,163,180,	0,5013,5200,5947,6618,10024,14275,18727,18886,20660,22458,28344,39252,39671,
#Partially deleted in new
chr2	38563185	38602626	chr2:38563185-38602626	1	-	38564181	38602626	789624	12	1052,99,58,202,122,218,72,73,81,238,119,189,	0,5013,5200,5947,6618,10024,14275,18727,20660,22458,28344,39252,
#Partially deleted in new
chr2	38563185	38603036	chr2:38563185-38603036	1	-	38564181	38602626	789624	13	1052,99,58,202,122,218,72,73,102,81,238,119,599,	0,5013,5200,5947,6618,10024,14275,18727,18886,20660,22458,28344,39252,
#Partially deleted in new
chr2	38563507	38591641	chr2:38563507-38591641	0	-	38577955	38591641	789624	13	730,99,58,202,122,218,72,83,73,97,86,238,112,	0,4691,4878,5625,6296,9702,13953,14412,18405,18564,20333,22136,28022,
#Partially deleted in new
chr2	38564031	38602857	chr2:38564031-38602857	1	-	38564181	38602626	789624	12	206,99,58,202,122,218,72,68,86,238,119,420,	0,4167,4354,5101,5772,9178,13429,17881,19809,21612,27498,38406,
#Deleted in new
chr2	38568078	38569836	chr2:38568078-38569836	0	-	38568190	38569836	789624	4	219,58,202,33,	0,307,1054,1725,
#Partially deleted in new
chr2	38581074	38602929	chr2:38581074-38602929	1	-	38581871	38602867	789624	7	911,97,86,238,119,163,73,	0,997,2766,4569,10455,21363,21782,
#Partially deleted in new
chr2	38581814	38585747	chr2:38581814-38585747	0	-	38581814	38581814	8553170	3	354,86,104,	0,2026,3829,
#Partially deleted in new
chr2	38583842	38600026	chr2:38583842-38600026	0	-	38583842	38599903	789624	4	84,238,119,129,	0,1801,7687,16055,
#Partially deleted in new
chr2	38591575	38603586	chr2:38591575-38603586	0	-	38591575	38591575	8553170	3	73,163,419,	0,10862,11592,
#Deleted in new
chr2	38601597	38602178	chr2:38601597-38602178	3	+	38601597	38601597	8553170	2	29,204,	0,377,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	38665909	38734768	chr2:38665909-38734768	3	+	38666161	38733565	0	7	442,155,207,82,142,175,1281,	0,10002,15370,23903,63646,65825,67578,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	38666080	38681348	chr2:38666080-38681348	0	+	38666080	38666080	8553170	4	271,155,102,69,	0,9831,13979,15199,
#Partially deleted in new
chr2	38666116	38733958	chr2:38666116-38733958	1	+	38666161	38733565	789624	4	235,142,175,471,	0,63439,65618,67371,
#Partially deleted in new
chr2	38666242	38731802	chr2:38666242-38731802	0	+	38666242	38698397	789624	7	109,155,207,82,71,142,68,	0,9669,15037,23570,32123,63313,65492,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	38668201	38669528	chr2:38668201-38669528	0	-	38668201	38668201	8553170	3	560,210,79,	0,657,1248,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	38668566	38669528	chr2:38668566-38669528	0	-	38668566	38668566	8553170	3	195,127,79,	0,292,883,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	38668687	38671421	chr2:38668687-38671421	3	-	38668687	38668687	8553170	4	74,210,200,68,	0,171,651,2666,
#Partially deleted in new
chr2	38681294	38741237	chr2:38681294-38741237	0	+	38681294	38741170	789624	5	192,82,142,175,133,	0,8518,48261,50440,59810,
#Partially deleted in new
chr2	38743598	38751494	chr2:38743598-38751494	3	-	38745132	38751256	0	8	1589,36,54,111,75,177,181,266,	0,2545,3095,4448,4980,5930,6415,7630,
#Partially deleted in new
chr2	38743598	38751494	chr2:38743598-38751494	1	-	38745132	38751256	0	7	1589,54,111,75,177,181,266,	0,3095,4448,4980,5930,6415,7630,
#Partially deleted in new
chr2	38743600	38751415	chr2:38743600-38751415	0	-	38749318	38751256	789624	9	1587,36,54,111,75,449,177,181,187,	0,2543,3093,4446,4978,5297,5928,6413,7628,
#Partially deleted in new
chr2	38744452	38751363	chr2:38744452-38751363	0	-	38749318	38751256	789624	9	735,36,54,102,75,449,177,181,135,	0,1691,2241,3603,4126,4445,5076,5561,6776,
#Partially deleted in new
chr2	38744716	38749564	chr2:38744716-38749564	0	-	38745132	38749564	789624	5	471,54,111,75,36,	0,1977,3330,3862,4812,
#Partially deleted in new
chr2	38744892	38751358	chr2:38744892-38751358	1	-	38745132	38751256	789624	8	295,36,54,102,75,177,181,130,	0,1251,1801,3163,3686,4636,5121,6336,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	38744892	38748616	chr2:38744892-38748616	0	-	38747066	38748616	789624	6	295,36,54,69,111,38,	0,1251,1801,2169,3154,3686,
#Partially deleted in new
chr2	38744894	38751282	chr2:38744894-38751282	0	-	38749515	38751256	0	7	293,36,54,102,1127,181,54,	0,1249,1799,3161,3684,5119,6334,
#Partially deleted in new
chr2	38744894	38747044	chr2:38744894-38747044	0	-	38744894	38744894	8553170	3	293,36,351,	0,1249,1799,
#Partially deleted in new
chr2	38744917	38751352	chr2:38744917-38751352	0	-	38749515	38751256	0	7	270,36,54,111,1127,181,124,	0,1226,1776,3129,3661,5096,6311,
#Partially deleted in new
chr2	38745052	38748912	chr2:38745052-38748912	0	-	38745052	38745052	8553170	5	135,36,54,78,334,	0,1091,1641,3027,3526,
#Partially deleted in new
chr2	38748046	38751138	chr2:38748046-38751138	0	-	38749151	38749662	789624	6	111,75,276,177,181,315,	0,532,851,1482,1967,2777,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	38751533	38781965	chr2:38751533-38781965	1	+	38778990	38781530	789624	6	285,95,166,147,68,449,	0,16571,26582,27438,27724,29983,
#Deleted in new
chr2	38763533	38765221	chr2:38763533-38765221	7	+	38763533	38763533	16724991	1	1688,	0,
#Partially deleted in new
chr2	38769264	38770124	chr2:38769264-38770124	7	+	38769264	38769264	16724991	2	260,270,	0,590,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	38778184	38785000	chr2:38778184-38785000	3	+	38778990	38781892	0	3	97,147,3484,	0,787,3332,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	38778209	38781947	chr2:38778209-38781947	1	+	38778990	38781540	789624	4	72,147,184,431,	0,762,1048,3307,
#Partially deleted in new
chr2	38797728	38875908	chr2:38797728-38875908	3	-	38798298	38868405	789624	24	714,201,135,75,135,84,96,277,201,174,97,117,206,55,134,125,196,122,176,839,189,159,230,122,	0,4986,8830,16092,17792,21148,21320,25264,28118,28787,30611,40102,45276,49290,50540,56325,57328,58611,60932,63270,64416,65632,70453,78058,
#Partially deleted in new
chr2	38797735	38848402	chr2:38797735-38848402	0	-	38798298	38848402	789624	14	707,201,75,135,84,96,277,201,174,97,117,206,55,134,	0,4979,16085,17785,21141,21313,25257,28111,28780,30604,40095,45269,49283,50533,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr2	38797967	38875925	chr2:38797967-38875925	0	-	38797967	38797967	8553170	23	475,201,135,75,135,88,96,277,201,174,97,117,206,55,134,1199,122,176,839,189,159,230,139,	0,4747,8591,15853,17553,20905,21081,25025,27879,28548,30372,39863,45037,49051,50301,56086,58372,60693,63031,64177,65393,70214,77819,
#Partially deleted in new
chr2	38798351	38803023	chr2:38798351-38803023	0	-	38798351	38798351	8553170	2	91,309,	0,4363,
#Partially deleted in new
chr2	38806403	38818960	chr2:38806403-38818960	0	-	38806403	38806403	8553170	4	290,75,135,84,	0,7417,9117,12473,
#Partially deleted in new
chr2	38810431	38811654	chr2:38810431-38811654	7	-	38810431	38810431	16724991	1	1223,	0,
#Partially deleted in new
chr2	38815874	38819108	chr2:38815874-38819108	0	-	38816173	38819108	789624	3	311,84,60,	0,3002,3174,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	38853044	38875879	chr2:38853044-38875879	0	-	38853044	38853044	8553170	8	2208,122,176,839,189,159,230,93,	0,3295,5616,7954,9100,10316,15137,22742,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	38856362	38857118	chr2:38856362-38857118	0	-	38856362	38856362	8553170	2	99,456,	0,300,
#Deleted in new
chr2	38861719	38863133	chr2:38861719-38863133	3	+	38861719	38861719	8553170	2	34,516,	0,898,
#Partially deleted in new
chr2	38861785	38875934	chr2:38861785-38875934	0	-	38861785	38863437	789624	4	52,189,159,148,	0,359,1575,14001,
#Partially deleted in new
chr2	38875961	38882707	chr2:38875961-38882707	3	+	38881441	38882515	789624	5	149,51,107,137,295,	0,4217,4638,5480,6451,
#Partially deleted in new
chr2	38875990	38882646	chr2:38875990-38882646	1	+	38881441	38882515	789624	5	221,51,107,137,234,	0,4188,4609,5451,6422,
#Partially deleted in new
chr2	38875990	38929072	chr2:38875990-38929072	0	+	38881441	38889951	789624	9	120,51,107,137,105,73,110,50,166,	0,4188,4609,5451,13891,19786,43372,45383,52916,
#Partially deleted in new
chr2	38876010	38882647	chr2:38876010-38882647	1	+	38881441	38882515	789624	5	100,51,125,137,235,	0,4168,4571,5431,6402,
#Partially deleted in new
chr2	38876037	38882697	chr2:38876037-38882697	1	+	38880668	38882515	789624	3	73,107,285,	0,4562,6375,
#Partially deleted in new
chr2	38876052	38882709	chr2:38876052-38882709	1	+	38876052	38882515	789624	5	58,51,107,137,297,	0,4126,4547,5389,6360,
#Partially deleted in new
chr2	38876067	38882652	chr2:38876067-38882652	1	+	38881507	38882515	789624	5	43,51,107,103,240,	0,4111,4532,5408,6345,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	38884559	38884666	chr2:38884559-38884666	3	-	38884559	38884559	8553170	1	107,	0,
#Partially deleted in new
chr2	38889840	38975449	chr2:38889840-38975449	3	+	38919447	38973843	789624	18	146,73,110,50,165,122,143,60,225,130,133,84,84,149,165,808,140,1736,	0,5936,29522,31533,39066,39868,41268,45934,47494,54060,61148,63321,64532,67058,68193,70000,76165,83873,
#Partially deleted in new
chr2	38919362	38975445	chr2:38919362-38975445	1	+	38919447	38973843	789624	16	110,50,165,122,143,60,225,130,133,84,84,149,165,808,140,1732,	0,2011,9544,10346,11746,16412,17972,24538,31626,33799,35010,37536,38671,40478,46643,54351,
#Partially deleted in new
chr2	38928779	38931309	chr2:38928779-38931309	0	+	38928779	38928779	8553170	3	292,122,201,	0,929,2329,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	38936875	38937158	chr2:38936875-38937158	3	-	38936875	38936875	8553170	1	283,	0,
#Partially deleted in new
chr2	38957909	38973943	chr2:38957909-38973943	0	+	38957909	38957909	8553170	3	289,140,230,	0,8096,15804,
#Partially deleted in new
chr2	38958054	38960071	chr2:38958054-38960071	0	+	38958054	38958054	8553170	3	144,134,231,	0,1366,1786,
#Deleted in new
chr2	38959286	38960342	chr2:38959286-38960342	3	-	38959286	38959286	789624	1	1056,	0,
#Partially deleted in new
chr2	38960503	38973869	chr2:38960503-38973869	1	+	38966008	38971921	789624	4	136,140,75,163,	0,5502,11366,13203,
#Partially deleted in new
chr2	38960504	38973253	chr2:38960504-38973253	1	+	38966008	38971921	789624	4	135,140,75,244,	0,5501,11365,12505,
#Partially deleted in new
chr2	38960560	38969641	chr2:38960560-38969641	0	+	38960560	38960560	8553170	3	79,140,237,	0,5445,8844,
#Partially deleted in new
chr2	38981395	39121051	chr2:38981395-39121051	3	-	38985823	39120422	0	24	4920,119,45,265,117,173,118,163,120,223,104,123,82,656,128,99,111,144,210,165,132,126,125,49,	0,6077,7874,13727,15526,15857,25016,25635,29188,30730,32064,32471,33369,41174,42614,53816,53994,69748,73218,75306,77277,86232,138940,139607,
#Partially deleted in new
chr2	38981552	39120463	chr2:38981552-39120463	1	-	38985823	39120422	0	23	4763,119,45,265,117,173,118,163,120,223,104,123,82,656,128,99,111,144,210,165,132,126,128,	0,5920,7717,13570,15369,15700,24859,25478,29031,30573,31907,32314,33212,41017,42457,53659,53837,69591,73061,75149,77120,86075,138783,
#Partially deleted in new
chr2	38985685	39120450	chr2:38985685-39120450	1	-	38985823	39120422	789624	22	630,119,265,117,173,118,163,120,223,104,123,82,656,128,99,111,144,210,165,132,126,115,	0,1787,9437,11236,11567,20726,21345,24898,26440,27774,28181,29079,36884,38324,49526,49704,65458,68928,71016,72987,81942,134650,
#Partially deleted in new
chr2	38986045	38987725	chr2:38986045-38987725	0	-	38986045	38986045	8553170	2	270,253,	0,1427,
#Partially deleted in new
chr2	38992278	38993836	chr2:38992278-38993836	0	-	38992278	38992278	8553170	2	764,427,	0,1131,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	38992823	38993836	chr2:38992823-38993836	0	-	38992823	38992823	8553170	2	219,445,	0,568,
#Partially deleted in new
chr2	38992975	38993857	chr2:38992975-38993857	3	-	38992975	38992975	8553170	2	91,448,	0,434,
#Partially deleted in new
chr2	38997340	39007499	chr2:38997340-39007499	0	-	38997340	38997340	8553170	3	85,118,469,	0,9071,9690,
#Deleted in new
chr2	39022875	39023823	chr2:39022875-39023823	0	-	39022875	39022875	8553170	2	350,46,	0,902,
#Partially deleted in new
chr2	39024120	39051357	chr2:39024120-39051357	0	-	39024120	39024120	8553170	4	17,99,111,214,	0,11091,11269,27023,
#Partially deleted in new
chr2	39056732	39124345	chr2:39056732-39124345	0	-	39056732	39067669	789624	4	134,132,126,187,	0,1940,10895,67426,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	39082588	39082692	chr2:39082588-39082692	3	+	39082588	39082588	8553170	1	104,	0,
#Partially deleted in new
chr2	39098148	39098445	chr2:39098148-39098445	7	-	39098148	39098148	16724991	1	297,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	39128825	39128927	chr2:39128825-39128927	3	-	39128825	39128825	8553170	1	102,	0,
#Partially deleted in new
chr2	39175645	39187707	chr2:39175645-39187707	0	-	39175994	39187707	789624	4	451,135,57,81,	0,3541,8945,11981,
#Partially deleted in new
chr2	39178546	39229532	chr2:39178546-39229532	3	-	39179165	39229532	789624	8	775,57,83,198,91,73,122,168,	0,6044,9080,11758,25980,34853,47292,50818,
#Partially deleted in new
chr2	39178546	39229532	chr2:39178546-39229532	1	-	39178546	39229532	789624	9	213,135,57,83,198,91,73,122,168,	0,640,6044,9080,11758,25980,34853,47292,50818,
#Partially deleted in new
chr2	39204526	39229588	chr2:39204526-39229588	0	-	39213463	39229532	789624	3	91,73,224,	0,8873,24838,
#Partially deleted in new
chr2	39249265	39437312	chr2:39249265-39437312	3	-	39250617	39436987	0	34	1440,56,71,93,69,172,104,59,118,61,80,85,42,113,160,43,54,39,59,63,59,79,111,82,63,132,73,43,48,56,65,91,58,421,	0,2564,5184,9082,9253,11340,15937,17923,23017,23216,29141,31006,33247,37586,38855,41026,43507,43964,50477,58677,60195,66044,76252,76464,76633,76880,82651,84266,87654,88260,94122,106983,128800,187626,
#Partially deleted in new
chr2	39249277	39379809	chr2:39249277-39379809	1	-	39250617	39356304	789624	33	1428,56,71,93,69,172,104,59,118,61,80,85,42,113,160,43,54,39,59,59,79,111,82,63,132,73,43,48,56,65,91,58,58,	0,2552,5172,9070,9241,11328,15925,17911,23005,23204,29129,30994,33235,37574,38843,41014,43495,43952,50465,60183,66032,76240,76452,76621,76868,82639,84254,87642,88248,94110,106971,128788,130474,
#Partially deleted in new
chr2	39249282	39437301	chr2:39249282-39437301	1	-	39250617	39436987	0	33	1423,56,71,93,69,172,104,59,118,61,80,85,42,113,160,43,54,39,59,59,79,111,82,63,132,73,43,48,56,65,91,58,410,	0,2547,5167,9065,9236,11323,15920,17906,23000,23199,29124,30989,33230,37569,38838,41009,43490,43947,50460,60178,66027,76235,76447,76616,76863,82634,84249,87637,88243,94105,106966,128783,187609,
#Partially deleted in new
chr2	39258522	39261117	chr2:39258522-39261117	0	-	39258522	39258522	8553170	2	65,512,	0,2083,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	39260690	39267425	chr2:39260690-39267425	0	-	39260690	39260690	8553170	3	87,104,237,	0,4512,6498,
#Partially deleted in new
chr2	39271910	39278419	chr2:39271910-39278419	0	-	39271910	39271910	8553170	3	490,61,13,	0,571,6496,
#Deleted in new
chr2	39283656	39283791	chr2:39283656-39283791	3	-	39283656	39283656	8553170	1	135,	0,
#Partially deleted in new
chr2	39288214	39315517	chr2:39288214-39315517	0	-	39288214	39288214	8553170	7	66,43,54,39,59,59,208,	0,2077,4558,5015,11528,21246,27095,
#Partially deleted in new
chr2	39290327	39294297	chr2:39290327-39294297	0	-	39290327	39290327	8553170	4	7,54,39,456,	0,2445,2902,3514,
#Partially deleted in new
chr2	39290329	39299845	chr2:39290329-39299845	0	-	39290329	39290329	8553170	4	5,54,39,103,	0,2443,2900,9413,
#Partially deleted in new
chr2	39293242	39325933	chr2:39293242-39325933	0	-	39303114	39325933	789624	9	26,59,44,63,59,79,111,82,35,	0,6500,9831,14700,16218,22067,32275,32487,32656,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	39323327	39323804	chr2:39323327-39323804	3	-	39323327	39323327	8553170	1	477,	0,
#Partially deleted in new
chr2	39325787	39437147	chr2:39325787-39437147	0	-	39326191	39436987	789624	7	24,63,132,65,91,58,256,	0,111,358,17600,30461,52278,111104,
#Partially deleted in new
chr2	39337574	39437228	chr2:39337574-39437228	0	-	39356300	39436987	789624	4	7,65,91,337,	0,5813,18674,99317,
#Partially deleted in new
chr2	39356164	39437065	chr2:39356164-39437065	1	-	39356214	39436987	789624	3	175,58,174,	0,21901,80727,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	39436636	39604076	chr2:39436636-39604076	1	+	39436636	39436636	8553170	9	52,93,69,128,128,65,19,119,765,	0,17202,17660,79777,81946,121345,150379,151812,166675,
#Partially deleted in new
chr2	39437368	39516768	chr2:39437368-39516768	0	+	39437368	39437368	8553170	2	167,355,	0,79045,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	39437401	39584648	chr2:39437401-39584648	0	+	39437401	39437401	8553170	6	134,93,69,128,128,44,	0,16437,16895,79012,81181,147203,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	39437415	39601344	chr2:39437415-39601344	1	+	39437415	39437415	789624	6	120,93,69,128,128,1979,	0,16423,16881,78998,81167,161950,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	39437430	39474758	chr2:39437430-39474758	0	+	39437430	39437430	8553170	4	105,93,69,232,	0,16408,16866,37096,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	39453838	39454726	chr2:39453838-39454726	0	+	39453838	39453838	8553170	2	93,430,	0,458,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	39453921	39624356	chr2:39453921-39624356	0	+	39453921	39453921	8553170	5	10,69,128,128,258,	0,375,62492,64661,170177,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	39514145	39599539	chr2:39514145-39599539	3	+	39514145	39514145	8553170	6	1200,128,128,65,206,174,	0,2268,4437,43836,70459,85220,
#Partially deleted in new
chr2	39518638	39665343	chr2:39518638-39665343	1	+	39518638	39518638	8553170	3	72,129,257,	0,127623,146448,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	39518674	39599539	chr2:39518674-39599539	0	+	39518674	39518674	8553170	3	36,119,174,	0,69774,80691,
#Partially deleted in new
chr2	39664981	39707136	chr2:39664981-39707136	0	+	39664981	39664981	8553170	3	367,114,88,	0,39099,42067,
#Partially deleted in new
chr2	39665497	39717450	chr2:39665497-39717450	0	+	39665497	39665497	8553170	4	143,114,138,441,	0,38583,41551,51512,
#Partially deleted in new
chr2	39665918	39717963	chr2:39665918-39717963	3	+	39665974	39717251	789624	4	456,114,138,954,	0,38162,41130,51091,
#Partially deleted in new
chr2	39665966	39717956	chr2:39665966-39717956	1	+	39665974	39704153	789624	5	200,71,114,266,635,	0,337,38114,51043,51355,
#Partially deleted in new
chr2	39687306	39717209	chr2:39687306-39717209	0	+	39687306	39687306	8553170	4	119,114,138,200,	0,16774,19742,29703,
#Partially deleted in new
chr2	39697812	39717093	chr2:39697812-39717093	0	+	39697812	39697812	8553170	4	179,114,138,84,	0,6268,9236,19197,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	39736059	39770013	chr2:39736059-39770013	0	-	39736059	39736059	8553170	8	1000,109,115,72,121,88,53,1590,	0,8310,19235,19829,21188,25271,29997,32364,
#Partially deleted in new
chr2	39736304	39779267	chr2:39736304-39779267	3	-	39736734	39779239	789624	10	755,109,115,72,88,53,78,410,136,154,	0,8065,18990,19584,25026,29752,32119,33405,35200,42809,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	39736306	39779267	chr2:39736306-39779267	0	-	39757347	39779239	789624	11	753,109,115,72,121,88,53,78,410,136,154,	0,8063,18988,19582,20941,25024,29750,32117,33403,35198,42807,
#Partially deleted in new
chr2	39736609	39779221	chr2:39736609-39779221	0	-	39770086	39779221	789624	10	450,109,115,72,88,53,78,362,126,108,	0,7760,18685,19279,24721,29447,31814,33148,34905,42504,
#Partially deleted in new
chr2	39736682	39744654	chr2:39736682-39744654	0	-	39736682	39736682	8553170	2	377,285,	0,7687,
#Partially deleted in new
chr2	39761331	39779152	chr2:39761331-39779152	0	-	39766089	39779152	789624	7	87,53,78,193,410,136,39,	0,4725,7092,7569,8378,10173,17782,
#Partially deleted in new
chr2	39761364	39766212	chr2:39761364-39766212	0	-	39761364	39761364	8553170	2	54,156,	0,4692,
#Partially deleted in new
chr2	39768902	39779239	chr2:39768902-39779239	0	-	39768902	39768902	8553170	4	289,410,136,126,	0,807,2602,10211,
#Partially deleted in new
chr2	39770016	39779240	chr2:39770016-39779240	0	-	39770016	39770016	8553170	2	103,127,	0,9097,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	39786452	40251747	chr2:39786452-40251747	0	+	39786452	39786452	8553170	2	73,64,	0,465231,
#Partially deleted in new
chr2	39792358	40251732	chr2:39792358-40251732	0	+	39792358	39792358	8553170	6	190,130,76,54,122,49,	0,57598,59663,312550,431271,459325,
#Partially deleted in new
chr2	39851306	40251729	chr2:39851306-40251729	1	+	39851306	39851306	8553170	7	198,76,57,70,54,122,46,	0,715,4693,18298,253602,372323,400377,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	39917559	40043542	chr2:39917559-40043542	1	+	39917559	39917559	8553170	2	100,125,	0,125858,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	39917562	40251732	chr2:39917562-40251732	0	+	39917562	39917562	8553170	3	97,54,49,	0,187346,334121,
#Partially deleted in new
chr2	39917828	40251732	chr2:39917828-40251732	0	+	39917828	39917828	8553170	4	54,170,54,49,	0,5020,187080,333855,
#Partially deleted in new
chr2	39917840	40251721	chr2:39917840-40251721	0	+	39917840	39917840	8553170	5	42,41,54,58,38,	0,5008,187068,292126,333843,
#Partially deleted in new
chr2	39917844	40251731	chr2:39917844-40251731	0	+	39917844	39917844	8553170	4	38,41,54,48,	0,5004,187064,333839,
#Partially deleted in new
chr2	39919692	40105321	chr2:39919692-40105321	1	+	39919692	39919692	8553170	3	91,41,413,	0,3156,185216,
#Deleted in new
chr2	39929109	39929998	chr2:39929109-39929998	7	+	39929109	39929109	16724991	1	889,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	40042349	40105422	chr2:40042349-40105422	1	+	40042349	40042349	8553170	4	124,125,54,262,	0,1068,62559,62811,
#Partially deleted in new
chr2	40065324	40251726	chr2:40065324-40251726	0	+	40065324	40065324	8553170	4	148,97,54,43,	0,35836,39584,186359,
#Partially deleted in new
chr2	40065346	40251757	chr2:40065346-40251757	0	+	40065346	40065346	8553170	3	509,54,74,	0,39562,186337,
#Partially deleted in new
chr2	40065352	40251757	chr2:40065352-40251757	0	+	40065352	40065352	8553170	5	120,54,102,122,74,	0,39556,48649,158277,186331,
#Partially deleted in new
chr2	40065357	40251729	chr2:40065357-40251729	0	+	40065357	40065357	8553170	4	498,54,102,46,	0,39551,48644,186326,
#Partially deleted in new
chr2	40065357	40251732	chr2:40065357-40251732	0	+	40065357	40065357	8553170	4	115,54,122,49,	0,39551,158272,186326,
#Partially deleted in new
chr2	40065363	40251732	chr2:40065363-40251732	0	+	40065363	40065363	8553170	5	109,54,77,58,49,	0,39545,143011,144603,186320,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	40066089	40251732	chr2:40066089-40251732	0	+	40066089	40066089	8553170	5	535,54,102,122,49,	0,38819,47912,157540,185594,
#Partially deleted in new
chr2	40072752	40251749	chr2:40072752-40251749	2	+	40072752	40072752	8553170	5	248,54,102,122,66,	0,32156,41249,150877,178931,
#Partially deleted in new
chr2	40086961	40251730	chr2:40086961-40251730	0	+	40086961	40086961	8553170	6	52,54,65,102,122,47,	0,17947,23983,27040,136668,164722,
#Partially deleted in new
chr2	40086963	40251749	chr2:40086963-40251749	0	+	40086963	40086963	8553170	8	50,54,194,97,129,58,122,66,	0,17945,31348,33740,36182,123003,136666,164720,
#Partially deleted in new
chr2	40086963	40251749	chr2:40086963-40251749	0	+	40086963	40086963	8553170	8	50,97,54,102,117,129,122,66,	0,14197,17945,27038,31425,36182,136666,164720,
#Partially deleted in new
chr2	40086963	40251749	chr2:40086963-40251749	0	+	40086963	40086963	8553170	5	50,54,58,122,66,	0,17945,123003,136666,164720,
#Partially deleted in new
chr2	40086963	40251749	chr2:40086963-40251749	0	+	40086963	40086963	8553170	5	50,54,102,122,66,	0,17945,27038,136666,164720,
#Partially deleted in new
chr2	40086974	40251732	chr2:40086974-40251732	0	+	40086974	40086974	8553170	5	39,54,65,102,49,	0,17934,23970,27027,164709,
#Partially deleted in new
chr2	40086974	40251718	chr2:40086974-40251718	0	+	40086974	40086974	8553170	6	39,54,58,110,122,35,	0,17934,122992,126134,136655,164709,
#Partially deleted in new
chr2	40086974	40251721	chr2:40086974-40251721	0	+	40086974	40086974	8553170	5	39,54,58,50,38,	0,17934,122992,126194,164709,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	40097269	40452069	chr2:40097269-40452069	1	-	40115252	40430280	789624	8	18360,276,100,131,18,104,1832,166,	0,42131,63495,67584,77555,80482,331203,354634,
#Partially deleted in new
chr2	40104305	40251723	chr2:40104305-40251723	0	+	40104305	40104305	8553170	2	657,40,	0,147378,
#Partially deleted in new
chr2	40104908	40255209	chr2:40104908-40255209	1	+	40104908	40104908	789624	3	54,91,790,	0,146775,149511,
#Partially deleted in new
chr2	40114494	40118395	chr2:40114494-40118395	1	+	40114494	40114494	8553170	3	659,213,84,	0,2328,3817,
#Partially deleted in new
chr2	40114537	40251749	chr2:40114537-40251749	0	+	40114537	40114537	8553170	3	616,122,66,	0,109092,137146,
#Partially deleted in new
chr2	40114730	40430271	chr2:40114730-40430271	0	-	40177766	40430271	789624	8	899,276,100,131,18,104,107,1799,	0,24670,46034,50123,60094,63021,63656,313742,
#Partially deleted in new
chr2	40114934	40251749	chr2:40114934-40251749	0	+	40114934	40114934	8553170	6	219,77,58,311,122,66,	0,93440,95032,98234,108695,136749,
#Partially deleted in new
chr2	40115028	40254578	chr2:40115028-40254578	1	+	40115028	40115028	8553170	4	125,122,91,159,	0,108601,136655,139391,
#Partially deleted in new
chr2	40115030	40512361	chr2:40115030-40512361	3	-	40115252	40430280	789624	11	599,276,100,131,69,15,18,21,107,1829,13,	0,24370,45734,49823,55250,59675,59794,60230,63356,313442,397318,
#Partially deleted in new
chr2	40115044	40430304	chr2:40115044-40430304	1	-	40115252	40430280	789624	9	585,276,100,131,69,18,21,107,1832,	0,24356,45720,49809,55236,59780,60216,63342,313428,
#Partially deleted in new
chr2	40115075	40255102	chr2:40115075-40255102	0	+	40115075	40115075	8553170	3	78,91,683,	0,136608,139344,
#Partially deleted in new
chr2	40115112	40512435	chr2:40115112-40512435	1	-	40115252	40430280	789624	8	517,276,100,131,18,104,1832,87,	0,24288,45652,49741,59712,62639,313360,397236,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	40115249	40611053	chr2:40115249-40611053	1	-	40115252	40430280	789624	8	380,276,100,131,18,104,1832,124,	0,24151,45515,49604,59575,62502,313223,495680,
#Partially deleted in new
chr2	40115252	40430280	chr2:40115252-40430280	1	-	40115252	40430280	789624	10	377,276,100,131,69,15,18,21,107,1808,	0,24148,45512,49601,55028,59453,59572,60008,63134,313220,
#Partially deleted in new
chr2	40115252	40430280	chr2:40115252-40430280	1	-	40115252	40430280	789624	7	377,276,100,131,18,104,1808,	0,24148,45512,49601,59572,62499,313220,
#Partially deleted in new
chr2	40115252	40430280	chr2:40115252-40430280	1	-	40115252	40430280	789624	9	377,276,100,131,69,15,18,104,1808,	0,24148,45512,49601,55028,59453,59572,62499,313220,
#Partially deleted in new
chr2	40189785	40251757	chr2:40189785-40251757	0	+	40189785	40189785	8553170	6	101,227,171,58,211,74,	0,753,5974,20181,60513,61898,
#Partially deleted in new
chr2	40209025	40251757	chr2:40209025-40251757	0	+	40209025	40209025	8553170	3	192,58,74,	0,941,42658,
#Partially deleted in new
chr2	40209964	40255058	chr2:40209964-40255058	1	+	40209964	40209964	8553170	3	60,91,639,	0,41719,44455,
#Partially deleted in new
chr2	40220142	40254763	chr2:40220142-40254763	1	+	40220142	40220142	8553170	4	243,122,91,344,	0,3487,31541,34277,
#Partially deleted in new
chr2	40250950	40251732	chr2:40250950-40251732	0	+	40250950	40250950	8553170	2	196,49,	0,733,
#Partially deleted in new
chr2	40251422	40254546	chr2:40251422-40254546	1	+	40251422	40251422	8553170	3	126,91,127,	0,261,2997,
#Partially deleted in new
chr2	40430019	40512435	chr2:40430019-40512435	0	-	40430019	40430280	789624	3	285,189,87,	0,23141,82329,
#Partially deleted in new
chr2	40430019	40453438	chr2:40430019-40453438	0	-	40430019	40430280	789624	2	285,278,	0,23141,
#Partially deleted in new
chr2	40430060	40452008	chr2:40430060-40452008	0	-	40430060	40430280	789624	3	244,234,105,	0,16354,21843,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	40591284	40679604	chr2:40591284-40679604	3	+	40591284	40591284	8553170	4	260,35,153,2019,	0,1637,3203,86301,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	40746486	40767452	chr2:40746486-40767452	3	+	40746486	40746486	8553170	4	166,64,82,237,	0,8079,8651,20729,
#Partially deleted in new
chr2	41143779	41156814	chr2:41143779-41156814	7	+	41143779	41143779	16724991	3	179,133,218,	0,7264,12817,
#Partially deleted in new
chr2	41156597	41157555	chr2:41156597-41157555	5	+	41156597	41156597	16724991	1	958,	0,
#Deleted in new
chr2	41819746	41820754	chr2:41819746-41820754	7	+	41819746	41819746	16724991	1	1008,	0,
#Deleted in new
chr2	41850202	41850601	chr2:41850202-41850601	7	-	41850202	41850202	16724991	1	399,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	41857270	41857372	chr2:41857270-41857372	3	-	41857270	41857270	8553170	1	102,	0,
#Deleted in new
chr2	41871270	41871388	chr2:41871270-41871388	3	+	41871270	41871270	8553170	1	118,	0,
#Partially deleted in new
chr2	41876762	41894044	chr2:41876762-41894044	3	+	41876762	41876762	8553170	5	539,129,68,279,700,	0,887,13588,15766,16582,
#Deleted in new
chr2	41877073	41877955	chr2:41877073-41877955	0	+	41877073	41877073	8553170	2	228,306,	0,576,
#Partially deleted in new
chr2	41877554	41894046	chr2:41877554-41894046	1	+	41877554	41877554	5263520	3	224,68,1518,	0,12796,14974,
#Partially deleted in new
chr2	41877555	41893046	chr2:41877555-41893046	0	+	41877555	41877555	8553170	2	223,518,	0,14973,
#Deleted in new
chr2	41931598	41933465	chr2:41931598-41933465	3	-	41931598	41931598	789624	4	271,70,109,190,	0,564,821,1677,
#Deleted in new
chr2	41931618	41933723	chr2:41931618-41933723	0	-	41931618	41931618	789624	3	251,70,448,	0,544,1657,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	41935367	41953803	chr2:41935367-41953803	0	-	41935367	41935367	8553170	4	3246,77,321,77,	0,12127,17620,18359,
#Partially deleted in new
chr2	41938088	41956806	chr2:41938088-41956806	0	-	41938088	41938088	8553170	5	525,77,321,274,44,	0,9406,14899,16734,18674,
#Partially deleted in new
chr2	41938602	41953295	chr2:41938602-41953295	3	-	41938602	41953295	789624	3	11,77,308,	0,8892,14385,
#Partially deleted in new
chr2	41947486	41953295	chr2:41947486-41953295	1	-	41947486	41953295	789624	2	85,308,	0,5501,
#Deleted in new
chr2	41952929	41954266	chr2:41952929-41954266	0	-	41952929	41952929	8553170	2	379,251,	0,1086,
#Partially deleted in new
chr2	42015624	42025302	chr2:42015624-42025302	3	-	42015624	42015624	8553170	3	117,72,157,	0,6557,9521,
#Partially deleted in new
chr2	42048019	42058528	chr2:42048019-42058528	3	+	42048199	42057688	789624	7	819,123,272,80,108,174,926,	0,5219,6016,6921,7266,9201,9583,
#Partially deleted in new
chr2	42048043	42057742	chr2:42048043-42057742	0	+	42048199	42053287	789624	8	354,299,123,272,80,108,174,140,	0,496,5195,5992,6897,7242,9177,9559,
#Partially deleted in new
chr2	42048578	42053541	chr2:42048578-42053541	0	+	42048578	42048578	8553170	2	260,303,	0,4660,
#Partially deleted in new
chr2	42048773	42054540	chr2:42048773-42054540	0	+	42048773	42048773	8553170	3	65,123,505,	0,4465,5262,
#Deleted in new
chr2	42054641	42055631	chr2:42054641-42055631	0	+	42054641	42054641	8553170	2	379,346,	0,644,
#Partially deleted in new
chr2	42054806	42057406	chr2:42054806-42057406	0	+	42054806	42054806	8553170	2	587,186,	0,2414,
#Partially deleted in new
chr2	42054930	42058469	chr2:42054930-42058469	0	+	42054930	42054930	8553170	3	90,108,1249,	0,355,2290,
#Partially deleted in new
chr2	42054941	42057913	chr2:42054941-42057913	0	+	42054941	42054941	8553170	4	79,201,174,311,	0,251,2279,2661,
#Partially deleted in new
chr2	42054956	42058186	chr2:42054956-42058186	0	+	42054956	42054956	8553170	3	64,139,584,	0,2299,2646,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	42143237	42170231	chr2:42143237-42170231	3	-	42143237	42143237	789624	4	107,190,98,262,	0,4413,6697,26732,
#Partially deleted in new
chr2	42169349	42332548	chr2:42169349-42332548	3	+	42169611	42330207	0	23	287,183,130,174,129,26,124,150,70,111,96,135,136,152,126,132,68,89,98,88,99,131,2815,	0,76155,87151,91771,93828,95356,111500,113473,115284,116919,118877,125775,126031,131891,133754,133965,135134,146612,148077,156117,156804,159536,160384,
#Partially deleted in new
chr2	42169352	42330744	chr2:42169352-42330744	1	+	42169611	42330207	0	22	284,183,130,129,26,124,150,70,111,96,135,136,152,126,132,68,89,98,88,99,131,1011,	0,76152,87148,93825,95353,111497,113470,115281,116916,118874,125772,126028,131888,133751,133962,135131,146609,148074,156114,156801,159533,160381,
#Partially deleted in new
chr2	42169380	42261513	chr2:42169380-42261513	0	+	42169380	42169380	8553170	4	256,183,130,393,	0,76124,87120,91740,
#Partially deleted in new
chr2	42169390	42245688	chr2:42169390-42245688	0	+	42169390	42169390	8553170	3	246,154,184,	0,38538,76114,
#Deleted in new
chr2	42169445	42170301	chr2:42169445-42170301	1	-	42169445	42169445	8553170	2	220,332,	0,524,
#Partially deleted in new
chr2	42169460	42330874	chr2:42169460-42330874	1	+	42169611	42330207	789624	24	176,183,130,174,129,26,33,124,150,70,111,96,135,136,152,126,132,68,89,98,88,99,131,1141,	0,76044,87040,91660,93717,95245,95458,111389,113362,115173,116808,118766,125664,125920,131780,133643,133854,135023,146501,147966,156006,156693,159425,160273,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	42282908	42289913	chr2:42282908-42289913	0	+	42282908	42282908	8553170	4	64,70,111,1687,	0,1725,3360,5318,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	42285922	42332548	chr2:42285922-42332548	0	+	42285922	42285922	8553170	14	457,96,135,136,152,126,132,68,89,98,88,99,131,2815,	0,2304,9202,9458,15318,17181,17392,18561,30039,31504,39544,40231,42963,43811,
#Partially deleted in new
chr2	42317473	42319998	chr2:42317473-42319998	0	+	42317473	42317473	8553170	2	51,464,	0,2061,
#Partially deleted in new
chr2	42333545	42361149	chr2:42333545-42361149	0	-	42333773	42361149	789624	3	324,132,60,	0,19666,27544,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	42349337	42369010	chr2:42349337-42369010	3	-	42351218	42361161	789624	4	2022,132,759,143,	0,3874,11752,19530,
#Partially deleted in new
chr2	42350506	42361216	chr2:42350506-42361216	1	-	42351218	42361161	789624	3	853,132,127,	0,2705,10583,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	42350506	42360038	chr2:42350506-42360038	0	-	42350506	42350506	789624	3	853,132,933,	0,2705,8599,
#Partially deleted in new
chr2	42350851	42361192	chr2:42350851-42361192	0	-	42361041	42361161	789624	3	508,132,255,	0,2360,10086,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	42350940	42388507	chr2:42350940-42388507	0	-	42350940	42350940	8553170	3	419,132,63,	0,2271,37504,
#Partially deleted in new
chr2	42352886	42361172	chr2:42352886-42361172	1	-	42353175	42361161	789624	2	457,83,	0,8203,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	42365669	42425088	chr2:42365669-42425088	0	-	42365669	42365669	8553170	5	205,208,62,68,268,	0,22779,48029,49813,59151,
#Partially deleted in new
chr2	42440376	42440436	chr2:42440376-42440436	3	+	42440376	42440376	8553170	1	60,	0,
#Partially deleted in new
chr2	42442016	42494097	chr2:42442016-42494097	3	-	42443933	42493501	789624	2	2563,1261,	0,50820,
#Partially deleted in new
chr2	42442031	42493977	chr2:42442031-42493977	1	-	42443933	42493501	789624	2	2548,1108,	0,50838,
#Deleted in new
chr2	42463138	42463997	chr2:42463138-42463997	7	-	42463138	42463138	16724991	1	859,	0,
#Deleted in new
chr2	42469816	42470266	chr2:42469816-42470266	7	+	42469816	42469816	16724991	1	450,	0,
#Partially deleted in new
chr2	42494568	42756947	chr2:42494568-42756947	1	+	42579178	42753399	789624	18	438,92,68,94,127,64,118,103,100,189,75,59,122,152,223,87,147,3574,	0,594,75868,84538,114889,145604,149558,161631,165194,187832,201196,203207,209628,213334,214305,224419,228320,258805,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	42511569	42511851	chr2:42511569-42511851	3	+	42511569	42511569	8553170	1	282,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	42532765	42533442	chr2:42532765-42533442	7	-	42532765	42532765	16724991	2	325,54,	0,623,
#Partially deleted in new
chr2	42568044	42756947	chr2:42568044-42756947	1	+	42579178	42753399	789624	17	182,68,94,127,64,118,103,100,189,75,59,122,152,223,87,147,3574,	0,2392,11062,41413,72128,76082,88155,91718,114356,127720,129731,136152,139858,140829,150943,154844,185329,
#Partially deleted in new
chr2	42568110	42656302	chr2:42568110-42656302	0	+	42568110	42568110	8553170	6	116,68,94,64,118,103,	0,2326,10996,72062,76016,88089,
#Partially deleted in new
chr2	42568167	42659776	chr2:42568167-42659776	0	+	42568167	42568167	8553170	7	59,68,127,64,118,103,14,	0,2269,41290,72005,75959,88032,91595,
#Partially deleted in new
chr2	42568516	42709544	chr2:42568516-42709544	3	+	42568745	42709119	789624	14	257,68,94,127,64,118,103,100,189,75,59,125,152,671,	0,1920,10590,40941,71656,75610,87683,91246,113884,127248,129259,135677,139386,140357,
#Partially deleted in new
chr2	42568674	42709544	chr2:42568674-42709544	1	+	42568745	42709119	789624	14	99,68,94,127,64,118,103,100,189,75,59,122,152,671,	0,1762,10432,40783,71498,75452,87525,91088,113726,127090,129101,135522,139228,140199,
#Partially deleted in new
chr2	42568674	42709213	chr2:42568674-42709213	0	+	42568745	42707942	789624	14	99,68,94,127,64,118,103,100,189,75,59,122,144,340,	0,1762,10432,40783,71498,75452,87525,91088,113726,127090,129101,135522,139236,140199,
#Partially deleted in new
chr2	42568737	42754060	chr2:42568737-42754060	0	+	42568745	42752250	789624	18	36,68,94,127,64,118,103,100,189,75,59,122,152,223,87,147,74,687,	0,1699,10369,40720,71435,75389,87462,91025,113663,127027,129038,135459,139165,140136,150250,154151,183496,184636,
#Partially deleted in new
chr2	42568745	42753399	chr2:42568745-42753399	1	+	42568745	42753399	789624	17	28,68,94,127,64,118,103,100,189,75,59,125,152,223,87,147,26,	0,1691,10361,40712,71427,75381,87454,91017,113655,127019,129030,135448,139157,140128,150242,154143,184628,
#Partially deleted in new
chr2	42569383	42609488	chr2:42569383-42609488	0	+	42579178	42609488	789624	4	513,68,94,31,	0,1053,9723,40074,
#Partially deleted in new
chr2	42570436	42656205	chr2:42570436-42656205	0	+	42570436	42570436	8553170	5	68,94,127,118,6,	0,8670,39021,73690,85763,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	42613674	42644245	chr2:42613674-42644245	0	+	42613674	42613674	8553170	3	520,64,119,	0,26498,30452,
#Partially deleted in new
chr2	42659519	42682706	chr2:42659519-42682706	0	+	42659519	42659519	8553170	2	343,306,	0,22881,
#Deleted in new
chr2	42680087	42680279	chr2:42680087-42680279	7	-	42680087	42680087	16724991	1	192,	0,
#Partially deleted in new
chr2	42695764	42709153	chr2:42695764-42709153	0	+	42695764	42695764	8553170	6	75,59,80,122,152,280,	0,2011,2650,8432,12138,13109,
#Partially deleted in new
chr2	42695764	42709211	chr2:42695764-42709211	0	+	42695764	42695764	8553170	4	75,59,152,338,	0,2011,12138,13109,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	42702306	42709213	chr2:42702306-42709213	0	+	42702306	42702306	8553170	3	2012,152,340,	0,5596,6567,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	42703648	42753848	chr2:42703648-42753848	0	+	42703648	42703648	8553170	6	670,152,141,87,147,475,	0,4254,5225,15339,19240,49725,
#Partially deleted in new
chr2	42709074	42723334	chr2:42709074-42723334	0	+	42709074	42709074	8553170	3	22,87,446,	0,9913,13814,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	42712739	42712847	chr2:42712739-42712847	3	+	42712739	42712739	8553170	1	108,	0,
#Deleted in new
chr2	42762480	42764261	chr2:42762480-42764261	3	-	42762907	42764179	789624	1	1781,	0,
#Partially deleted in new
chr2	42767088	42792592	chr2:42767088-42792592	3	-	42767436	42792536	0	10	427,83,69,146,44,90,107,84,79,136,	0,506,771,2624,3054,3404,16225,16695,21440,25368,
#Deleted in new
chr2	42767088	42769893	chr2:42767088-42769893	0	-	42767088	42767088	8553170	4	427,83,69,181,	0,506,771,2624,
#Partially deleted in new
chr2	42767119	42792574	chr2:42767119-42792574	0	-	42767119	42767119	8553170	9	396,83,69,146,440,107,84,79,118,	0,475,740,2593,3023,16194,16664,21409,25337,
#Partially deleted in new
chr2	42767666	42792531	chr2:42767666-42792531	0	-	42767666	42767666	8553170	6	262,44,107,84,79,75,	0,2476,15647,16117,20862,24790,
#Partially deleted in new
chr2	42769710	42792572	chr2:42769710-42792572	0	-	42769710	42788585	789624	8	148,44,90,107,84,79,159,116,	0,432,782,13603,14073,18818,19297,22746,
#Partially deleted in new
chr2	42769886	42792593	chr2:42769886-42792593	0	-	42769886	42769886	8553170	5	696,107,84,79,137,	0,13427,13897,18642,22570,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	42782786	42792567	chr2:42782786-42792567	0	-	42782786	42782786	8553170	4	634,84,79,111,	0,997,5742,9670,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	42797224	42798712	chr2:42797224-42798712	7	-	42797224	42797224	16724991	3	492,183,186,	0,801,1302,
#Partially deleted in new
chr2	42826321	42827617	chr2:42826321-42827617	7	-	42826321	42826321	16724991	2	555,425,	0,871,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	43027852	43039543	chr2:43027852-43039543	3	-	43027852	43027852	789624	6	333,1064,167,98,70,424,	0,1061,3282,7202,8843,11267,
#Partially deleted in new
chr2	43032500	43039547	chr2:43032500-43039547	0	-	43032500	43032500	8553170	4	136,169,70,428,	0,233,4195,6619,
#Partially deleted in new
chr2	43041192	43043782	chr2:43041192-43043782	3	-	43041192	43041192	8553170	2	451,118,	0,2472,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	43091387	43091494	chr2:43091387-43091494	3	-	43091387	43091387	8553170	1	107,	0,
#Partially deleted in new
chr2	43097745	43102691	chr2:43097745-43102691	3	-	43097745	43097745	8553170	2	295,657,	0,4289,
#Deleted in new
chr2	43222401	43226609	chr2:43222401-43226609	3	-	43224318	43226315	789624	2	3351,345,	0,3863,
#Deleted in new
chr2	43227209	43228855	chr2:43227209-43228855	3	+	43227209	43227209	789624	1	1646,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	43229572	43233394	chr2:43229572-43233394	3	+	43229572	43229572	8553170	3	44,138,216,	0,3191,3606,
#Partially deleted in new
chr2	43230835	43596046	chr2:43230835-43596046	3	-	43230947	43592392	0	38	508,170,132,154,73,119,380,95,116,169,132,90,92,123,114,133,110,158,159,137,136,211,152,124,123,156,179,692,221,95,188,49,33,149,131,95,100,116,	0,1877,48929,56072,60860,61268,61998,89610,113286,167135,197264,199377,254398,267997,274786,277812,297043,310323,318374,320953,321368,325509,329398,335862,339552,340871,341978,343500,346186,347677,350905,355565,355866,356018,359988,361116,361481,365095,
#Partially deleted in new
chr2	43230850	43570515	chr2:43230850-43570515	0	-	43230947	43570515	789624	23	493,170,132,154,73,119,380,95,116,169,92,123,114,133,110,158,159,137,136,211,152,124,128,	0,1862,48914,56057,60845,61253,61983,89595,113271,167120,254383,267982,274771,277797,297028,310308,318359,320938,321353,325494,329383,335847,339537,
#Partially deleted in new
chr2	43230851	43596038	chr2:43230851-43596038	0	-	43577156	43592392	789624	36	492,170,132,154,73,119,380,95,116,169,132,123,114,133,110,158,159,137,136,211,152,124,123,156,179,692,213,95,188,49,33,149,131,95,100,108,	0,1861,48913,56056,60844,61252,61982,89594,113270,167119,197248,267981,274770,277796,297027,310307,318358,320937,321352,325493,329382,335846,339536,340855,341962,343484,346170,347661,350889,355549,355850,356002,359972,361100,361465,365079,
#Partially deleted in new
chr2	43230851	43595974	chr2:43230851-43595974	1	-	43230947	43592392	0	38	492,170,132,154,73,119,380,95,116,169,132,90,92,123,114,133,110,158,159,137,136,211,152,124,123,156,179,692,221,95,188,49,33,149,131,95,100,328,	0,1861,48913,56056,60844,61252,61982,89594,113270,167119,197248,199361,254382,267981,274770,277796,297027,310307,318358,320937,321352,325493,329382,335846,339536,340855,341962,343484,346170,347661,350889,355549,355850,356002,359972,361100,361465,364795,
#Partially deleted in new
chr2	43231206	43277301	chr2:43231206-43277301	0	-	43231206	43231206	8553170	3	137,170,75,	0,1506,46020,
#Partially deleted in new
chr2	43286984	43293066	chr2:43286984-43293066	0	-	43286984	43286984	8553170	3	77,527,233,	0,4711,5849,
#Partially deleted in new
chr2	43292991	43391922	chr2:43292991-43391922	0	-	43292991	43292991	8553170	4	222,95,116,131,	0,27454,51130,98800,
#Partially deleted in new
chr2	43333154	43398058	chr2:43333154-43398058	0	-	43333154	43333154	8553170	5	109,116,78,158,88,	0,10967,36965,38810,64816,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr2	43343000	43596038	chr2:43343000-43596038	0	-	43577156	43592392	789624	30	1237,169,132,90,92,123,114,133,110,158,159,134,136,211,152,124,123,156,179,692,213,95,188,49,33,149,131,95,100,108,	0,54970,85099,87212,142233,155832,162621,165647,184878,198158,206209,208788,209203,213344,217233,223697,227387,228706,229813,231335,234021,235512,238740,243400,243701,243853,247823,248951,249316,252930,
#Partially deleted in new
chr2	43344120	43372237	chr2:43344120-43372237	0	-	43344120	43344120	8553170	2	117,273,	0,27844,
#Partially deleted in new
chr2	43344121	43574813	chr2:43344121-43574813	0	-	43552324	43574813	789624	18	116,169,90,92,123,114,133,110,158,159,137,136,152,124,123,156,179,478,	0,53849,86091,141112,154711,161500,164526,183757,197037,205088,207667,208082,216112,222576,226266,227585,228692,230214,
#Partially deleted in new
chr2	43344156	43463259	chr2:43344156-43463259	0	-	43344156	43344156	8553170	5	81,169,132,90,226,	0,53814,83943,86056,118877,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	43408306	43408412	chr2:43408306-43408412	3	+	43408306	43408306	8553170	1	106,	0,
#Partially deleted in new
chr2	43428102	43486672	chr2:43428102-43486672	0	-	43428102	43428102	8553170	4	129,90,92,236,	0,2110,57131,58334,
#Partially deleted in new
chr2	43484277	43508753	chr2:43484277-43508753	0	-	43484277	43484277	8553170	5	176,92,123,114,106,	0,956,14555,21344,24370,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	43492031	43492313	chr2:43492031-43492313	3	+	43492031	43492031	8553170	1	282,	0,
#Partially deleted in new
chr2	43505717	43541303	chr2:43505717-43541303	0	-	43505717	43505717	8553170	5	18,133,110,138,145,	0,2930,22161,32711,35441,
#Partially deleted in new
chr2	43552067	43592420	chr2:43552067-43592420	1	-	43552199	43592392	0	17	272,211,152,124,123,156,179,692,221,95,188,49,33,149,131,95,104,	0,4277,8166,14630,18320,19639,20746,22268,24954,26445,29673,34333,34634,34786,38756,39884,40249,
#Partially deleted in new
chr2	43556092	43596023	chr2:43556092-43596023	1	-	43556333	43592392	0	17	463,152,124,123,156,179,692,221,95,188,49,33,149,131,95,100,93,	0,4141,10605,14295,15614,16721,18243,20929,22420,25648,30308,30609,30761,34731,35859,36224,39838,
#Partially deleted in new
chr2	43556348	43592416	chr2:43556348-43592416	0	-	43572955	43592392	789624	15	207,148,128,123,156,152,221,95,188,49,33,149,131,95,100,	0,3885,10345,14039,15358,16465,20673,22164,25392,30052,30353,30505,34475,35603,35968,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	43562217	43596007	chr2:43562217-43596007	1	-	43566395	43592392	789624	16	4604,123,156,179,692,221,95,188,49,33,149,131,95,100,47,77,	0,8170,9489,10596,12118,14804,16295,19523,24183,24484,24636,28606,29734,30099,30626,33713,
#Deleted in new
chr2	43620877	43620984	chr2:43620877-43620984	3	-	43620877	43620877	8553170	1	107,	0,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr2	43637272	43767987	chr2:43637272-43767987	3	+	43644673	43765598	789624	30	107,126,63,150,84,82,186,962,76,95,145,137,111,87,159,81,180,109,113,180,98,178,156,98,142,146,130,87,138,2575,	0,7398,41590,55241,57158,57870,59898,62374,66708,69049,70128,72717,72947,73216,74952,83396,88999,92364,94217,101068,103673,105468,106561,108593,116346,119846,121627,125031,126955,128140,
#Partially deleted in new
chr2	43637299	43741365	chr2:43637299-43741365	0	+	43637299	43637299	8553170	21	80,126,63,150,84,82,183,962,76,95,145,137,111,87,159,81,180,109,113,180,420,	0,7371,41563,55214,57131,57843,59874,62347,66681,69022,70101,72690,72920,73189,74925,83369,88972,92337,94190,101041,103646,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr2	43637307	43765792	chr2:43637307-43765792	0	+	43637307	43637307	8553170	30	72,126,202,63,150,84,82,186,962,76,95,145,137,111,1895,81,180,109,113,180,181,178,156,98,142,146,130,87,138,380,	0,7363,21358,41555,55206,57123,57835,59863,62339,66673,69014,70093,72682,72912,73181,83361,88964,92329,94182,101033,103638,105433,106526,108558,116311,119811,121592,124996,126920,128105,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	43637338	43697239	chr2:43637338-43697239	0	+	43644673	43679600	789624	8	41,126,63,122,150,84,82,69,	0,7332,41524,42178,55175,57092,57804,59832,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	43675150	43676322	chr2:43675150-43676322	3	-	43675374	43676322	789624	1	1172,	0,
#Partially deleted in new
chr2	43680464	43681622	chr2:43680464-43681622	7	-	43680464	43680464	16724991	1	1158,	0,
#Partially deleted in new
chr2	43692229	43695204	chr2:43692229-43695204	0	+	43692229	43692229	8553170	3	434,84,62,	0,2201,2913,
#Partially deleted in new
chr2	43731540	43743870	chr2:43731540-43743870	0	+	43731540	43731540	8553170	5	62,180,228,178,37,	0,6800,9275,11200,12293,
#Partially deleted in new
chr2	43740984	43744134	chr2:43740984-43744134	0	+	43740984	43740984	8553170	3	59,178,301,	0,1756,2849,
#Partially deleted in new
chr2	43745898	43765482	chr2:43745898-43765482	0	+	43745898	43758959	789624	6	65,142,130,87,138,70,	0,7720,13001,16405,18329,19514,
#Partially deleted in new
chr2	43772119	43772350	chr2:43772119-43772350	3	-	43772119	43772119	8553170	1	231,	0,
#Partially deleted in new
chr2	43774038	43810010	chr2:43774038-43810010	3	+	43774138	43809767	789624	13	108,118,35,70,89,187,69,78,77,71,98,93,306,	0,2743,9481,13142,15594,20418,21851,22679,26802,27600,30603,31115,35666,
#Partially deleted in new
chr2	43774048	43795179	chr2:43774048-43795179	1	+	43774138	43794742	789624	6	98,118,35,70,89,723,	0,2733,9471,13132,15584,20408,
#Partially deleted in new
chr2	43774048	43795930	chr2:43774048-43795930	0	+	43774138	43789690	789624	6	98,118,35,89,187,41,	0,2733,9471,15584,20408,21841,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	43774063	43795183	chr2:43774063-43795183	1	+	43774138	43792790	789624	6	83,118,35,70,89,2508,	0,2718,9456,13117,15569,18612,
#Partially deleted in new
chr2	43774063	43800917	chr2:43774063-43800917	0	+	43774063	43774063	8553170	8	82,35,70,89,187,69,78,77,	0,9456,13117,15569,20393,21826,22654,26777,
#Partially deleted in new
chr2	43774081	43809997	chr2:43774081-43809997	1	+	43774138	43809767	789624	13	65,118,35,70,89,187,72,78,77,71,98,93,293,	0,2700,9438,13099,15551,20375,21805,22636,26759,27557,30560,31072,35623,
#Partially deleted in new
chr2	43776822	43805555	chr2:43776822-43805555	0	+	43776822	43805258	789624	11	77,35,70,89,187,69,78,77,71,98,402,	0,6697,10358,12810,17634,19067,19895,24018,24816,27819,28331,
#Partially deleted in new
chr2	43801270	43805177	chr2:43801270-43805177	0	+	43801270	43801270	8553170	3	439,98,24,	0,3371,3883,
#Partially deleted in new
chr2	43812471	43838819	chr2:43812471-43838819	3	-	43813115	43838679	0	13	838,113,186,139,206,214,130,140,133,99,137,122,283,	0,2005,7443,10325,11441,11747,12417,13910,15511,19297,19475,25362,26065,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	43812559	43838750	chr2:43812559-43838750	0	-	43812559	43812559	8553170	9	750,113,186,139,206,486,99,137,917,	0,1917,7355,10237,11353,15423,19209,19387,25274,
#Partially deleted in new
chr2	43812559	43838752	chr2:43812559-43838752	0	-	43812559	43812559	8553170	10	750,113,186,139,206,214,133,99,137,919,	0,1917,7355,10237,11353,11659,15423,19209,19387,25274,
#Partially deleted in new
chr2	43812841	43838839	chr2:43812841-43838839	1	-	43813115	43838679	0	13	468,113,186,139,206,214,130,140,133,99,137,122,303,	0,1635,7073,9955,11071,11377,12047,13540,15141,18927,19105,24992,25695,
#Partially deleted in new
chr2	43812842	43838865	chr2:43812842-43838865	0	-	43812842	43812842	8553170	9	467,113,186,139,206,133,99,137,1032,	0,1634,7072,9954,11070,15140,18926,19104,24991,
#Partially deleted in new
chr2	43831941	43873929	chr2:43831941-43873929	0	+	43832586	43873929	789624	9	720,102,157,239,133,270,163,84,143,	0,12565,14213,19642,20412,20657,40034,40281,41845,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	43832141	43848590	chr2:43832141-43848590	0	+	43832141	43832141	8553170	3	520,102,2436,	0,12365,14013,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	43838963	43882987	chr2:43838963-43882987	3	+	43839053	43877913	0	13	153,102,157,239,133,270,163,84,200,77,268,128,5212,	0,5543,7191,12620,13390,13635,33012,33259,34823,35443,36182,38597,38812,
#Partially deleted in new
chr2	43838974	43878466	chr2:43838974-43878466	1	+	43839053	43877913	0	13	142,102,157,239,133,270,163,84,200,77,268,128,691,	0,5532,7180,12609,13379,13624,33001,33248,34812,35432,36171,38586,38801,
#Boundary problem: need 38, got 0, diff 38, mapped 0.0
chr2	43886507	43996005	chr2:43886507-43996005	3	-	43888599	43995947	789624	38	2149,143,85,75,116,140,205,89,127,109,143,91,69,107,125,208,86,131,114,45,78,107,58,28,67,94,119,108,106,146,145,127,87,59,122,123,197,207,	0,3226,8037,10126,12711,12958,14812,19184,25924,31517,31748,38559,39385,47682,48246,57179,58824,59605,60749,61223,61614,61904,63094,64065,70877,74033,77080,87099,87287,87642,88106,88583,89635,90486,90647,93318,95730,109291,
#Partially deleted in new
chr2	43888277	43899284	chr2:43888277-43899284	0	-	43890354	43899284	789624	6	379,143,140,85,75,66,	0,1456,1945,6267,8356,10941,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	43888278	43903931	chr2:43888278-43903931	0	-	43888278	43888278	8553170	7	378,143,85,75,116,140,2612,	0,1455,6266,8355,10940,11187,13041,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	43892689	43892796	chr2:43892689-43892796	3	+	43892689	43892689	8553170	1	107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	43896236	43899571	chr2:43896236-43899571	0	-	43896236	43896236	8553170	3	472,116,106,	0,2982,3229,
#Deleted in new
chr2	43896443	43899648	chr2:43896443-43899648	0	-	43896443	43896443	8553170	3	265,116,183,	0,2775,3022,
#Partially deleted in new
chr2	43948425	43963804	chr2:43948425-43963804	0	-	43948425	43948425	8553170	6	93,58,28,67,94,217,	0,1176,2147,8959,12115,15162,
#Partially deleted in new
chr2	43958985	43995978	chr2:43958985-43995978	1	-	43959206	43995947	789624	14	235,94,119,108,106,146,145,127,87,59,122,123,197,180,	0,1555,4602,14621,14809,15164,15628,16105,17157,18008,18169,20840,23252,36813,
#Partially deleted in new
chr2	43963507	43995989	chr2:43963507-43995989	1	-	43963560	43995947	789624	12	199,108,106,146,145,127,87,59,122,123,197,191,	0,10099,10287,10642,11106,11583,12635,13486,13647,16318,18730,32291,
#Partially deleted in new
chr2	43974149	43995976	chr2:43974149-43995976	0	-	43974149	43995844	789624	9	146,145,127,87,59,122,123,197,203,	0,464,941,1993,2844,3005,5676,8088,21624,
#Deleted in new
chr2	44065893	44066154	chr2:44065893-44066154	7	-	44065893	44065893	16724991	1	261,	0,
#Deleted in new
chr2	44154788	44154895	chr2:44154788-44154895	3	-	44154788	44154788	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	44166265	44166943	chr2:44166265-44166943	7	+	44166265	44166265	16724991	1	678,	0,
#Deleted in new
chr2	44167624	44168859	chr2:44167624-44168859	3	-	44167624	44167624	8553170	1	1235,	0,
#Partially deleted in new
chr2	44167968	44218537	chr2:44167968-44218537	0	+	44201199	44218537	789624	6	611,325,860,118,112,58,	0,981,33217,41241,49998,50511,
#Partially deleted in new
chr2	44168850	44320310	chr2:44168850-44320310	3	+	44201199	44275524	8553170	15	424,860,118,112,58,462,180,155,126,120,125,196,168,117,112,	0,32335,40359,49116,49629,106653,111865,112536,117181,131120,132152,135292,143735,144984,151348,
#Partially deleted in new
chr2	44168876	44231472	chr2:44168876-44231472	3	+	44201199	44230718	0	6	398,860,118,112,58,1060,	0,32309,40333,49090,49603,61536,
#Partially deleted in new
chr2	44168876	44244384	chr2:44168876-44244384	0	+	44168876	44168876	8553170	6	398,860,118,112,58,157,	0,32309,40333,49090,49603,75351,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	44168876	44234646	chr2:44168876-44234646	1	+	44201199	44232345	0	6	398,860,118,112,58,2331,	0,32309,40333,49090,49603,63439,
#Partially deleted in new
chr2	44168876	44231471	chr2:44168876-44231471	1	+	44201199	44230001	0	6	398,860,118,112,58,1479,	0,32309,40333,49090,49603,61116,
#Partially deleted in new
chr2	44168876	44209432	chr2:44168876-44209432	0	+	44168876	44168876	8553170	3	398,860,223,	0,32309,40333,
#Partially deleted in new
chr2	44168909	44231472	chr2:44168909-44231472	1	+	44209224	44230718	0	5	365,118,112,58,1060,	0,40300,49057,49570,61503,
#Partially deleted in new
chr2	44201185	44218537	chr2:44201185-44218537	0	+	44201199	44218537	789624	4	689,64,112,58,	0,8078,16781,17294,
#Partially deleted in new
chr2	44201945	44232721	chr2:44201945-44232721	0	+	44201945	44201945	8553170	4	100,112,58,406,	0,16021,16534,30370,
#Partially deleted in new
chr2	44202016	44244383	chr2:44202016-44244383	0	+	44202016	44202016	8553170	6	29,118,62,112,58,156,	0,7193,11679,15950,16463,42211,
#Deleted in new
chr2	44217821	44219203	chr2:44217821-44219203	0	+	44217821	44217821	8553170	2	257,724,	0,658,
#Partially deleted in new
chr2	44270620	44271106	chr2:44270620-44271106	7	+	44270620	44270620	16724991	1	486,	0,
#Partially deleted in new
chr2	44275459	44321494	chr2:44275459-44321494	3	+	44275535	44320639	789624	10	506,180,155,126,120,125,196,168,117,1296,	0,5256,5927,10572,24511,25543,28683,37126,38375,44739,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	44275463	44318762	chr2:44275463-44318762	1	+	44275535	44318195	789624	10	502,180,155,126,120,125,196,168,117,645,	0,5252,5923,10568,24507,25539,28679,37122,38371,42654,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	44275535	44315243	chr2:44275535-44315243	1	+	44275535	44314029	789624	9	430,180,155,126,120,125,196,168,1409,	0,5180,5851,10496,24435,25467,28607,37050,38299,
#Partially deleted in new
chr2	44275535	44312790	chr2:44275535-44312790	1	+	44275535	44312762	789624	8	430,180,155,126,120,125,196,205,	0,5180,5851,10496,24435,25467,28607,37050,
#Partially deleted in new
chr2	44275535	44301417	chr2:44275535-44301417	1	+	44275535	44301167	789624	6	430,180,155,126,120,415,	0,5180,5851,10496,24435,25467,
#Partially deleted in new
chr2	44285082	44320821	chr2:44285082-44320821	1	+	44286100	44320639	789624	7	1075,120,125,196,168,117,623,	0,14888,15920,19060,27503,28752,35116,
#Partially deleted in new
chr2	44285494	44301086	chr2:44285494-44301086	0	+	44285639	44301086	789624	4	244,126,120,84,	0,537,14476,15508,
#Partially deleted in new
chr2	44300026	44314198	chr2:44300026-44314198	1	+	44304146	44314029	789624	4	64,196,168,364,	0,4116,12559,13808,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	44303805	44320798	chr2:44303805-44320798	1	+	44304113	44320639	789624	4	533,168,117,600,	0,8780,10029,16393,
#Partially deleted in new
chr2	44316280	44360674	chr2:44316280-44360674	0	-	44321355	44359715	789624	15	164,2440,74,124,150,217,176,198,186,217,136,207,67,123,1178,	0,2725,5546,6450,6981,10431,12656,16178,22070,22866,26136,27464,28239,29987,43216,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	44317609	44360674	chr2:44317609-44360674	0	-	44321355	44359715	789624	15	780,2440,74,124,150,217,176,198,186,217,136,207,67,123,1178,	0,1396,4217,5121,5652,9102,11327,14849,20741,21537,24807,26135,26910,28658,41887,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	44317610	44361862	chr2:44317610-44361862	1	-	44321355	44346342	789624	14	3835,74,124,150,217,176,198,186,217,136,207,67,123,339,	0,4216,5120,5651,9101,11326,14848,20740,21536,24806,26134,26909,28657,43913,
#Partially deleted in new
chr2	44318762	44361546	chr2:44318762-44361546	1	-	44321355	44346342	789624	14	2683,74,124,150,217,176,198,186,217,136,207,67,123,167,	0,3064,3968,4499,7949,10174,13696,19588,20384,23654,24982,25757,27505,42617,
#Partially deleted in new
chr2	44318762	44361561	chr2:44318762-44361561	1	-	44321355	44346342	789624	14	2683,74,124,150,217,176,198,186,217,136,207,67,123,145,	0,3064,3968,4499,7949,10174,13696,19588,20384,23654,24982,25757,27505,42654,
#Partially deleted in new
chr2	44318765	44361494	chr2:44318765-44361494	3	-	44321355	44359715	789624	15	2680,74,124,150,217,176,198,186,217,136,207,67,123,542,115,	0,3061,3965,4496,7946,10171,13693,19585,20381,23651,24979,25754,27502,40731,42614,
#Deleted in new
chr2	44320265	44323342	chr2:44320265-44323342	0	-	44320635	44323342	789624	3	378,124,81,	0,2465,2996,
#Partially deleted in new
chr2	44320826	44360674	chr2:44320826-44360674	1	-	44321355	44359715	789624	14	619,74,124,150,217,176,198,186,217,136,207,67,123,1178,	0,1000,1904,2435,5885,8110,11632,17524,18320,21590,22918,23693,25441,38670,
#Partially deleted in new
chr2	44320826	44361805	chr2:44320826-44361805	1	-	44321355	44359715	789624	15	619,74,124,150,217,176,198,186,217,136,207,67,123,254,282,	0,1000,1904,2435,5885,8110,11632,17524,18320,21590,22918,23693,25441,38670,40697,
#Partially deleted in new
chr2	44320921	44361806	chr2:44320921-44361806	1	-	44321355	44359715	789624	15	524,74,124,150,217,176,198,186,217,136,207,67,123,254,427,	0,905,1809,2340,5790,8015,11537,17429,18225,21495,22823,23598,25346,38575,40458,
#Partially deleted in new
chr2	44321067	44359749	chr2:44321067-44359749	1	-	44321355	44359715	789624	13	378,74,124,150,217,176,186,217,136,207,67,123,253,	0,759,1663,2194,5644,7869,17283,18079,21349,22677,23452,25200,38429,
#Partially deleted in new
chr2	44321072	44359749	chr2:44321072-44359749	1	-	44321355	44359715	789624	13	373,74,124,150,217,176,198,217,136,207,67,123,253,	0,754,1658,2189,5639,7864,11386,18074,21344,22672,23447,25195,38424,
#Deleted in new
chr2	44321463	44323302	chr2:44321463-44323302	0	-	44321703	44323302	789624	3	437,124,41,	0,1267,1798,
#Partially deleted in new
chr2	44343804	44361813	chr2:44343804-44361813	0	-	44343804	44343804	8553170	3	147,123,290,	0,2463,17719,
#Partially deleted in new
chr2	44343907	44361493	chr2:44343907-44361493	0	-	44343907	44359715	789624	6	44,67,123,254,58,114,	0,612,2360,15589,16711,17472,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	44346298	44361546	chr2:44346298-44361546	0	-	44346298	44346298	8553170	4	92,114,138,167,	0,911,9932,15081,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	44361949	44549785	chr2:44361949-44549785	1	+	44362007	44549598	789624	4	196,173,65,231,	0,10766,28291,187605,
#Partially deleted in new
chr2	44361955	44631714	chr2:44361955-44631714	1	+	44362007	44631525	789624	4	190,173,65,224,	0,10760,28285,269535,
#Partially deleted in new
chr2	44361963	44772592	chr2:44361963-44772592	3	+	44362007	44772113	0	11	182,173,65,61,55,64,67,75,64,132,557,	0,10752,28277,342319,344323,345435,353323,381658,392091,404466,410072,
#Partially deleted in new
chr2	44361963	44457261	chr2:44361963-44457261	1	+	44362007	44456590	0	4	182,173,65,694,	0,10752,28277,94604,
#Partially deleted in new
chr2	44362104	44401145	chr2:44362104-44401145	0	+	44362104	44391886	789624	7	41,173,65,133,192,113,126,	0,10611,28136,29780,31232,38668,38915,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	44369710	44392000	chr2:44369710-44392000	0	+	44369710	44369710	8553170	4	297,94,65,116,	0,3084,20530,22174,
#Partially deleted in new
chr2	44372741	44392073	chr2:44372741-44392073	0	+	44372741	44391886	789624	3	147,65,189,	0,17499,19143,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	44372747	44550790	chr2:44372747-44550790	0	+	44372747	44549598	789624	4	141,65,174,146,	0,17493,176807,177897,
#Partially deleted in new
chr2	44676593	44743657	chr2:44676593-44743657	0	+	44676593	44676593	8553170	7	182,61,55,64,67,88,36,	0,27689,29693,30805,38693,47135,67028,
#Partially deleted in new
chr2	44704284	44772113	chr2:44704284-44772113	1	+	44704284	44772113	789624	8	59,55,64,67,75,64,132,78,	0,2002,3114,11002,39337,49770,62145,67751,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	44921076	44939199	chr2:44921076-44939199	3	-	44921076	44921076	789624	2	2503,377,	0,17746,
#Partially deleted in new
chr2	44921076	44923039	chr2:44921076-44923039	0	-	44921076	44921076	8553170	2	140,408,	0,1555,
#Deleted in new
chr2	44923034	44935644	chr2:44923034-44935644	0	-	44923034	44923034	8553170	2	545,365,	0,12245,
#Deleted in new
chr2	44927913	44928396	chr2:44927913-44928396	3	-	44927913	44927913	8553170	1	483,	0,
#Deleted in new
chr2	44929976	44935359	chr2:44929976-44935359	0	-	44929976	44929976	8553170	2	271,80,	0,5303,
#Deleted in new
chr2	44931121	44938888	chr2:44931121-44938888	1	-	44931121	44931121	789624	3	356,159,66,	0,4158,7701,
#Deleted in new
chr2	44932319	44932406	chr2:44932319-44932406	3	+	44932319	44932319	8553170	1	87,	0,
#Deleted in new
chr2	44934054	44934271	chr2:44934054-44934271	3	+	44934054	44934054	8553170	1	217,	0,
#Deleted in new
chr2	44935293	44935368	chr2:44935293-44935368	3	+	44935293	44935293	8553170	1	75,	0,
#Deleted in new
chr2	44935584	44935908	chr2:44935584-44935908	3	+	44935584	44935584	8553170	1	324,	0,
#Deleted in new
chr2	44937425	44937696	chr2:44937425-44937696	3	+	44937425	44937425	8553170	1	271,	0,
#Deleted in new
chr2	44938832	44939028	chr2:44938832-44939028	3	+	44938832	44938832	8553170	1	196,	0,
#Deleted in new
chr2	44940044	44940245	chr2:44940044-44940245	3	+	44940044	44940044	8553170	1	201,	0,
#Deleted in new
chr2	44940153	44941873	chr2:44940153-44941873	3	-	44940153	44940153	789624	2	680,164,	0,1556,
#Deleted in new
chr2	44940583	44941494	chr2:44940583-44941494	1	-	44940583	44940583	8553170	2	250,307,	0,604,
#Deleted in new
chr2	44941897	44946077	chr2:44941897-44946077	3	+	44942104	44944760	789624	2	1013,1510,	0,2670,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	44954663	44968762	chr2:44954663-44968762	3	+	44954663	44954663	8553170	4	108,45,187,2345,	0,2458,6398,11754,
#Deleted in new
chr2	44996412	44996873	chr2:44996412-44996873	7	+	44996412	44996412	16724991	1	461,	0,
#Deleted in new
chr2	45005160	45009430	chr2:45005160-45009430	3	-	45006169	45009110	789624	2	1325,880,	0,3390,
#Deleted in new
chr2	45013213	45013668	chr2:45013213-45013668	3	-	45013213	45013213	8553170	2	172,195,	0,260,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	45164815	45323385	chr2:45164815-45323385	3	-	45164815	45164815	8553170	8	127,54,340,129,146,60,289,415,	0,1386,3722,24305,27324,46785,136168,158155,
#Deleted in new
chr2	45168582	45169414	chr2:45168582-45169414	3	+	45168582	45168582	8553170	2	295,258,	0,574,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	45174339	45175211	chr2:45174339-45175211	0	-	45174339	45174339	8553170	2	248,97,	0,775,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	45174343	45254941	chr2:45174343-45254941	0	-	45174343	45174343	789624	6	244,99,129,202,146,275,	0,771,14777,16539,17796,80323,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	45187169	45192285	chr2:45187169-45192285	0	-	45187169	45187169	8553170	2	2080,146,	0,4970,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	45192178	45323295	chr2:45192178-45323295	0	-	45192178	45192178	8553170	3	107,289,325,	0,108805,130792,
#Partially deleted in new
chr2	45388679	45611281	chr2:45388679-45611281	3	-	45389309	45605441	789624	21	920,185,180,177,107,83,92,108,91,158,108,104,136,97,139,118,167,387,181,80,63,	0,4265,24434,29685,31108,88313,99560,158052,158842,162445,164943,173973,184527,185947,191195,193013,196928,210769,213223,216682,222539,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	45388775	45448095	chr2:45388775-45448095	0	-	45388775	45388775	8553170	6	824,185,180,177,107,946,	0,4169,24338,29589,31012,58374,
#Partially deleted in new
chr2	45418454	45549072	chr2:45418454-45549072	0	-	45418454	45418454	8553170	6	87,107,92,108,91,82,	0,1333,69785,128277,129067,130536,
#Partially deleted in new
chr2	45546731	45568021	chr2:45546731-45568021	0	-	45546731	45546731	8553170	6	108,91,158,108,104,86,	0,790,4393,6891,15921,21204,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	45569198	45569492	chr2:45569198-45569492	3	-	45569198	45569198	8553170	1	294,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	45601921	45612165	chr2:45601921-45612165	0	-	45601921	45601921	8553170	4	162,80,217,96,	0,3440,9297,10148,
#Partially deleted in new
chr2	45651344	45843034	chr2:45651344-45843034	0	+	45652100	45843034	789624	3	359,545,35,	0,559,191655,
#Partially deleted in new
chr2	45651773	46187990	chr2:45651773-46187990	3	+	45652100	46184881	0	15	675,64,160,35,86,130,143,97,200,174,155,139,189,147,3256,	0,191226,324655,327202,328522,332777,349630,352768,355688,358570,434434,493319,499267,507832,532961,
#Partially deleted in new
chr2	45652359	45701491	chr2:45652359-45701491	0	+	45652359	45652359	8553170	3	89,107,109,	0,48179,49023,
#Partially deleted in new
chr2	45652400	45984567	chr2:45652400-45984567	0	+	45652400	45652400	8553170	7	48,172,64,160,35,86,17,	0,187979,190599,324028,326575,327895,332150,
#Deleted in new
chr2	45674700	45675476	chr2:45674700-45675476	3	-	45674700	45674700	8553170	2	207,167,	0,609,
#Partially deleted in new
chr2	45675618	45980356	chr2:45675618-45980356	0	+	45675618	45675618	8553170	7	65,100,85,64,160,35,61,	0,465,2213,167381,300810,303357,304677,
#Partially deleted in new
chr2	45676733	45845758	chr2:45676733-45845758	0	+	45676733	45676733	8553170	8	34,85,65,107,109,172,64,364,	0,1098,21211,23805,24649,163646,166266,168661,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	45677024	45686347	chr2:45677024-45686347	0	+	45677024	45677024	8553170	4	87,85,206,56,	0,807,8378,9267,
#Partially deleted in new
chr2	45697971	45852026	chr2:45697971-45852026	0	+	45697971	45697971	8553170	5	38,142,172,64,339,	0,3411,142408,145028,153716,
#Partially deleted in new
chr2	45697981	45770860	chr2:45697981-45770860	0	+	45697981	45697981	8553170	4	28,107,109,128,	0,2557,3401,72751,
#Partially deleted in new
chr2	45978094	45984681	chr2:45978094-45984681	0	+	45978094	45978094	8553170	4	546,35,86,131,	0,881,2201,6456,
#Partially deleted in new
chr2	46000901	46010964	chr2:46000901-46010964	1	+	46001411	46010737	789624	6	101,143,97,200,174,281,	0,502,3640,6560,9442,9782,
#Deleted in new
chr2	46003941	46004309	chr2:46003941-46004309	7	-	46003941	46003941	16724991	1	368,	0,
#Partially deleted in new
chr2	46073436	46151201	chr2:46073436-46151201	0	+	46073436	46073436	8553170	4	524,155,139,161,	0,12771,71656,77604,
#Partially deleted in new
chr2	46073795	46151164	chr2:46073795-46151164	0	+	46073795	46073795	8553170	4	203,155,139,124,	0,12412,71297,77245,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	46078014	46078828	chr2:46078014-46078828	3	-	46078014	46078014	8553170	2	355,109,	0,705,
#Partially deleted in new
chr2	46151052	46164895	chr2:46151052-46164895	0	+	46151052	46151052	8553170	3	177,147,150,	0,8553,13693,
#Partially deleted in new
chr2	46151101	46160060	chr2:46151101-46160060	0	+	46151101	46151101	8553170	2	128,455,	0,8504,
#Deleted in new
chr2	46256859	46257177	chr2:46256859-46257177	7	-	46256859	46256859	16724991	1	318,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	46266689	46266971	chr2:46266689-46266971	3	+	46266689	46266689	8553170	1	282,	0,
#Partially deleted in new
chr2	46293666	46346998	chr2:46293666-46346998	0	+	46293666	46293666	8553170	2	432,126,	0,53206,
#Partially deleted in new
chr2	46296607	46361090	chr2:46296607-46361090	0	+	46297911	46361090	789624	7	118,196,191,152,85,119,206,	0,1134,50265,59543,60116,64030,64277,
#Partially deleted in new
chr2	46297401	46386703	chr2:46297401-46386703	3	+	46297911	46384660	0	16	536,191,152,85,119,206,107,148,215,194,111,491,127,115,174,2195,	0,49471,58749,59322,63236,63483,72425,78288,79137,80492,81255,82825,84194,84573,85023,87107,
#Partially deleted in new
chr2	46297763	46347537	chr2:46297763-46347537	0	+	46297763	46297763	8553170	3	174,191,300,	0,49109,49474,
#Partially deleted in new
chr2	46335689	46356293	chr2:46335689-46356293	0	+	46335689	46335689	8553170	3	217,191,143,	0,11183,20461,
#Partially deleted in new
chr2	46356114	46361051	chr2:46356114-46361051	0	+	46356114	46356114	8553170	4	188,85,119,167,	0,609,4523,4770,
#Deleted in new
chr2	46375635	46378702	chr2:46375635-46378702	0	+	46375635	46375635	8553170	4	202,215,194,46,	0,903,2258,3021,
#Deleted in new
chr2	46379699	46386696	chr2:46379699-46386696	0	+	46379699	46379699	8553170	5	1018,127,115,174,2188,	0,1896,2275,2725,4809,
#Deleted in new
chr2	46381176	46382504	chr2:46381176-46382504	0	+	46381176	46381176	8553170	3	546,115,80,	0,798,1248,
#Deleted in new
chr2	46381634	46384550	chr2:46381634-46384550	0	+	46381634	46381634	8553170	4	88,115,174,75,	0,340,790,2841,
#Deleted in new
chr2	46392296	46394167	chr2:46392296-46394167	3	-	46392296	46392296	789624	3	187,233,150,	0,816,1721,
#Partially deleted in new
chr2	46429189	46441833	chr2:46429189-46441833	3	+	46429189	46429189	789624	4	90,100,276,275,	0,10937,11906,12369,
#Partially deleted in new
chr2	46429194	46484424	chr2:46429194-46484424	3	+	46429194	46429194	8553170	5	85,28,100,151,181,	0,981,10932,12026,55049,
#Partially deleted in new
chr2	46429223	46430693	chr2:46429223-46430693	1	+	46429223	46429223	8553170	2	56,518,	0,952,
#Partially deleted in new
chr2	46430175	46441833	chr2:46430175-46441833	0	+	46430175	46430175	8553170	3	58,141,275,	0,11055,11383,
#Partially deleted in new
chr2	46436472	46441832	chr2:46436472-46441832	1	+	46436472	46436472	8553170	4	224,100,80,274,	0,3654,4819,5086,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	46448223	46448511	chr2:46448223-46448511	3	-	46448223	46448223	8553170	1	288,	0,
#Partially deleted in new
chr2	46479564	46484425	chr2:46479564-46484425	3	+	46479585	46484425	789624	3	138,360,182,	0,840,4679,
#Partially deleted in new
chr2	46490749	46542178	chr2:46490749-46542178	0	-	46490749	46490749	8553170	5	82,115,93,64,503,	0,45063,45861,50640,50926,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	46499730	46501278	chr2:46499730-46501278	3	+	46499730	46499730	8553170	2	56,343,	0,1205,
#Partially deleted in new
chr2	46511846	46519957	chr2:46511846-46519957	1	-	46512030	46512711	789624	2	966,1013,	0,7098,
#Partially deleted in new
chr2	46511866	46542557	chr2:46511866-46542557	3	-	46512030	46512711	789624	5	946,115,93,64,341,	0,23946,24744,29523,30350,
#Partially deleted in new
chr2	46527877	46541583	chr2:46527877-46541583	0	-	46527877	46527877	8553170	4	170,115,93,194,	0,7935,8733,13512,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	46534299	46542002	chr2:46534299-46542002	0	-	46534299	46534299	8553170	3	1628,93,613,	0,2311,7090,
#Partially deleted in new
chr2	46535812	46541589	chr2:46535812-46541589	0	-	46535812	46535812	8553170	4	115,93,201,200,	0,798,1563,5577,
#Partially deleted in new
chr2	46541805	46576249	chr2:46541805-46576249	0	+	46541805	46541805	8553170	2	155,163,	0,34281,
#Partially deleted in new
chr2	46542727	46583121	chr2:46542727-46583121	3	+	46543046	46581083	0	5	461,59,165,96,2194,	0,1026,33359,33833,38200,
#Partially deleted in new
chr2	46542735	46576656	chr2:46542735-46576656	0	+	46543046	46576097	789624	3	453,165,96,	0,33351,33825,
#Partially deleted in new
chr2	46543148	46581270	chr2:46543148-46581270	0	+	46543148	46576097	789624	6	40,59,166,165,96,343,	0,605,17375,32938,33412,37779,
#Partially deleted in new
chr2	46543399	46576656	chr2:46543399-46576656	0	+	46576122	46576656	789624	3	413,165,96,	0,32687,33161,
#Partially deleted in new
chr2	46543766	46581318	chr2:46543766-46581318	0	+	46543766	46572784	789624	5	46,59,165,96,391,	0,28961,32320,32794,37161,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	46568255	46580238	chr2:46568255-46580238	3	-	46568255	46568255	789624	2	1315,204,	0,11779,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	46576127	46577125	chr2:46576127-46577125	0	+	46576127	46576127	8553170	2	124,565,	0,433,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	46580283	46581046	chr2:46580283-46581046	0	+	46580283	46580283	8553170	2	441,119,	0,644,
#Partially deleted in new
chr2	46580936	46617119	chr2:46580936-46617119	3	-	46581477	46615164	789624	6	655,109,117,92,249,150,	0,11538,31291,32757,34000,36033,
#Partially deleted in new
chr2	46581284	46617051	chr2:46581284-46617051	1	-	46588104	46615164	789624	7	307,105,109,117,92,249,82,	0,6790,11190,30943,32409,33652,35685,
#Partially deleted in new
chr2	46581284	46612274	chr2:46581284-46612274	0	-	46591907	46612274	789624	4	307,123,109,47,	0,10518,11190,30943,
#Partially deleted in new
chr2	46581284	46588622	chr2:46581284-46588622	0	-	46581284	46581284	8553170	2	307,548,	0,6790,
#Partially deleted in new
chr2	46581415	46617055	chr2:46581415-46617055	0	-	46612233	46615164	789624	5	176,109,117,249,86,	0,11059,30812,33521,35554,
#Partially deleted in new
chr2	46612227	46617030	chr2:46612227-46617030	0	-	46612227	46612227	8553170	2	117,3337,	0,1466,
#Deleted in new
chr2	46615017	46617037	chr2:46615017-46617037	0	-	46615017	46615164	789624	2	168,451,	0,1569,
#Partially deleted in new
chr2	46616415	46625053	chr2:46616415-46625053	0	+	46616415	46616415	8553170	5	608,66,55,104,891,	0,2357,3211,7348,7747,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	46617150	46625742	chr2:46617150-46625742	3	+	46617282	46624227	789624	5	148,66,55,104,1580,	0,1622,2476,6613,7012,
#Deleted in new
chr2	46668869	46670778	chr2:46668869-46670778	3	+	46668869	46668869	8553170	1	1909,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	46698939	46822804	chr2:46698939-46822804	3	+	46698939	46698939	8553170	8	172,183,104,239,101,392,52,704,	0,98379,98698,101269,112572,117581,119240,123161,
#Partially deleted in new
chr2	46698951	46763129	chr2:46698951-46763129	3	+	46758530	46760141	789624	2	160,4611,	0,59567,
#Partially deleted in new
chr2	46699186	46762313	chr2:46699186-46762313	1	+	46758530	46760141	789624	2	263,3795,	0,59332,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	46759746	46780244	chr2:46759746-46780244	0	+	46759746	46770879	8553170	3	115,101,623,	0,11072,19875,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	46777782	46780245	chr2:46777782-46780245	0	+	46777782	46777782	8553170	1	2463,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	46816667	46819458	chr2:46816667-46819458	1	+	46816667	46816667	8553170	3	245,64,1279,	0,702,1512,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	46816682	46822655	chr2:46816682-46822655	0	+	46816682	46816682	789624	4	230,186,52,555,	0,565,1497,5418,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	46816687	46822657	chr2:46816687-46822657	0	+	46816687	46816687	8553170	3	225,52,557,	0,1492,5413,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	46816696	46858210	chr2:46816696-46858210	0	+	46816696	46816696	8553170	3	216,68,125,	0,39226,41389,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	46827863	46859007	chr2:46827863-46859007	0	+	46827863	46827863	789624	3	221,68,922,	0,28059,30222,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	46845875	46859006	chr2:46845875-46859006	3	+	46845875	46845875	8553170	3	1162,68,927,	0,10047,12204,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	46852019	46853496	chr2:46852019-46853496	3	-	46852019	46852019	8553170	2	549,103,	0,1374,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	46855687	46858579	chr2:46855687-46858579	0	+	46855687	46855687	8553170	2	303,500,	0,2392,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	46899274	46908678	chr2:46899274-46908678	3	+	46899274	46899274	8553170	2	40,1795,	0,7609,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	46901869	46941855	chr2:46901869-46941855	1	-	46905462	46941663	0	3	3725,160,284,	0,5940,39702,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	46901873	46915868	chr2:46901873-46915868	1	-	46905462	46909171	0	4	3721,160,155,146,	0,5936,7149,13849,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	46901873	46915780	chr2:46901873-46915780	1	-	46905462	46909171	0	5	3721,160,155,116,58,	0,5936,7149,10669,13849,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	46901873	46916054	chr2:46901873-46916054	1	-	46905462	46907962	0	3	3721,160,74,	0,5936,14107,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	46901873	46915816	chr2:46901873-46915816	1	-	46905462	46907962	0	3	3721,160,94,	0,5936,13849,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	46901966	46915761	chr2:46901966-46915761	1	-	46905569	46909171	8553170	4	3624,160,155,39,	0,5843,7056,13756,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	46904854	46915789	chr2:46904854-46915789	0	-	46904854	46904854	8553170	2	740,67,	0,10868,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	46904957	46941732	chr2:46904957-46941732	3	-	46905462	46909171	0	4	637,160,155,161,	0,2852,4065,36614,
#Partially deleted in new
chr2	46905244	46941773	chr2:46905244-46941773	0	-	46905244	46905244	8553170	2	350,202,	0,36327,
#Partially deleted in new
chr2	46905367	46941855	chr2:46905367-46941855	1	-	46905462	46907962	0	3	227,160,284,	0,2442,36204,
#Partially deleted in new
chr2	46905393	46916112	chr2:46905393-46916112	1	-	46905462	46909171	0	4	201,160,155,132,	0,2416,3629,10587,
#Partially deleted in new
chr2	46905816	46909072	chr2:46905816-46909072	0	-	46905919	46909072	789624	3	166,160,50,	0,1993,3206,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	46907528	46915791	chr2:46907528-46915791	0	-	46907528	46907528	8553170	3	441,155,69,	0,1494,8194,
#Partially deleted in new
chr2	46907699	46941714	chr2:46907699-46941714	0	-	46907699	46907699	8553170	3	270,155,143,	0,1323,33872,
#Partially deleted in new
chr2	46907934	46914074	chr2:46907934-46914074	0	-	46907934	46909171	789624	3	35,155,375,	0,1088,5765,
#Partially deleted in new
chr2	46908706	46941727	chr2:46908706-46941727	0	-	46908706	46908706	8553170	2	471,156,	0,32865,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr2	46916156	47074048	chr2:46916156-47074048	1	+	46917195	47073923	789624	21	421,94,164,169,131,116,79,158,64,138,84,105,118,58,73,161,117,98,135,203,347,	0,1027,34206,40682,58816,62635,77293,78200,78979,89765,90484,95174,105705,107251,108130,113067,130158,133792,135589,144612,157545,
#Partially deleted in new
chr2	46941173	47076135	chr2:46941173-47076135	3	+	46941541	47073923	789624	20	552,164,169,131,116,79,158,64,138,84,105,118,58,73,161,117,98,135,203,2434,	0,9189,15665,33799,37618,52276,53183,53962,64748,65467,70157,80688,82234,83113,88050,105141,108775,110572,119595,132528,
#Partially deleted in new
chr2	46941274	47050025	chr2:46941274-47050025	0	+	46941274	46941274	8553170	17	451,164,169,58,131,116,79,158,64,138,84,105,118,58,73,161,77,	0,9088,15564,17220,33698,37517,52175,53082,53861,64647,65366,70056,80587,82133,83012,87949,108674,
#Partially deleted in new
chr2	46941285	47075324	chr2:46941285-47075324	1	+	46941541	47073923	789624	21	440,164,169,131,116,79,158,64,138,84,105,118,58,73,161,117,72,98,135,203,1623,	0,9077,15553,33687,37506,52164,53071,53850,64636,65355,70045,80576,82122,83001,87938,105029,105980,108663,110460,119483,132416,
#Partially deleted in new
chr2	46941542	47073923	chr2:46941542-47073923	0	+	46941542	47006007	789624	19	183,164,169,131,116,79,64,138,84,105,118,58,73,161,117,98,135,203,222,	0,8820,15296,33430,37249,51907,53593,64379,65098,69788,80319,81865,82744,87681,104772,108406,110203,119226,132159,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr2	46950420	47076137	chr2:46950420-47076137	0	+	46950420	46951694	789624	21	106,132,169,58,131,116,79,158,64,138,84,105,118,58,73,161,117,98,135,203,2436,	0,1181,6418,8074,24552,28371,43029,43936,44715,55501,56220,60910,71441,72987,73866,78803,95894,99528,101325,110348,123281,
#Deleted in new
chr2	46956614	46956888	chr2:46956614-46956888	3	-	46956614	46956614	8553170	1	274,	0,
#Partially deleted in new
chr2	46978117	47005994	chr2:46978117-47005994	0	+	46978117	46978117	8553170	6	132,116,79,158,64,73,	0,674,15332,16239,17018,27804,
#Partially deleted in new
chr2	46978739	47075557	chr2:46978739-47075557	0	+	46978739	46978739	8553170	16	168,79,158,64,138,84,105,118,58,73,161,117,98,135,203,1856,	0,14710,15617,16396,27182,27901,32591,43122,44668,45547,50484,67575,71209,73006,82029,94962,
#Partially deleted in new
chr2	46994230	47075324	chr2:46994230-47075324	0	+	46994230	46994230	8553170	12	284,64,138,84,105,73,161,117,98,135,203,1623,	0,905,11691,12410,17100,30056,34993,52084,55718,57515,66538,79471,
#Partially deleted in new
chr2	47005931	47049980	chr2:47005931-47049980	0	+	47005931	47023416	789624	7	128,84,105,58,73,161,32,	0,709,5399,17476,18355,23292,44017,
#Partially deleted in new
chr2	47034154	47060956	chr2:47034154-47060956	0	+	47034154	47034154	8553170	5	215,117,98,135,188,	0,12160,15794,17591,26614,
#Partially deleted in new
chr2	47035278	47040524	chr2:47035278-47040524	3	-	47035278	47035278	8553170	2	347,157,	0,5089,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	47045537	47108802	chr2:47045537-47108802	0	-	47045537	47045537	8553170	3	47,103,415,	0,1279,62850,
#Partially deleted in new
chr2	47046314	47050827	chr2:47046314-47050827	0	+	47046314	47046314	8553170	3	117,98,488,	0,3634,4025,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	47065756	47108785	chr2:47065756-47108785	0	-	47065756	47065756	8553170	2	381,398,	0,42631,
#Partially deleted in new
chr2	47065940	47176511	chr2:47065940-47176511	3	-	47152987	47176511	789624	9	197,105,141,55,65,258,60,31,71,	0,24329,55072,64000,64255,85317,87016,104793,110500,
#Deleted in new
chr2	47067821	47071204	chr2:47067821-47071204	3	+	47067821	47067821	8553170	2	777,83,	0,3300,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	47068186	47108788	chr2:47068186-47108788	0	-	47068186	47068186	8553170	2	370,401,	0,40201,
#Partially deleted in new
chr2	47086990	47155378	chr2:47086990-47155378	3	-	47087007	47155251	789624	7	140,105,55,65,258,60,208,	0,3279,42950,43205,64267,65966,68180,
#Partially deleted in new
chr2	47086990	47151295	chr2:47086990-47151295	0	-	47087007	47151295	789624	5	140,105,55,65,38,	0,3279,42950,43205,64267,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	47128874	47155287	chr2:47128874-47155287	1	-	47129925	47155251	789624	5	1121,65,258,60,117,	0,1321,22383,24082,26296,
#Partially deleted in new
chr2	47160081	47176601	chr2:47160081-47176601	3	-	47160775	47176443	0	6	723,136,107,144,31,161,	0,1641,2204,2437,10652,16359,
#Partially deleted in new
chr2	47160082	47176601	chr2:47160082-47176601	1	-	47160775	47176443	789624	5	722,58,131,31,161,	0,1640,2449,10651,16358,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	47160163	47174207	chr2:47160163-47174207	0	-	47160163	47160163	8553170	5	641,136,107,144,3474,	0,1559,2122,2355,10570,
#Partially deleted in new
chr2	47160171	47176500	chr2:47160171-47176500	0	-	47161838	47176443	789624	5	633,136,144,31,60,	0,1551,2347,10562,16269,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	47160601	47163963	chr2:47160601-47163963	0	-	47160601	47160601	8553170	4	203,136,107,1445,	0,1121,1684,1917,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	47160636	47176511	chr2:47160636-47176511	0	-	47160775	47176511	789624	7	168,136,107,144,31,46,71,	0,1086,1649,1882,10097,11777,15804,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	47161722	47176453	chr2:47161722-47176453	0	-	47161722	47161722	8553170	6	136,107,144,31,46,218,	0,563,796,9011,10691,14513,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	47162285	47176470	chr2:47162285-47176470	0	-	47162285	47162285	8553170	5	107,144,31,46,194,	0,233,8448,10128,13991,
#Partially deleted in new
chr2	47192404	47344989	chr2:47192404-47344989	3	-	47192404	47192404	8553170	3	413,75,89,	0,131016,152496,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	47192723	47345074	chr2:47192723-47345074	1	-	47192723	47192723	789624	5	94,107,136,93,174,	0,6713,139549,140210,152177,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	47213948	47344966	chr2:47213948-47344966	1	-	47213948	47213948	789624	3	1311,515,66,	0,6860,130952,
#Partially deleted in new
chr2	47225793	47239207	chr2:47225793-47239207	0	+	47225793	47225793	8553170	2	86,475,	0,12939,
#Partially deleted in new
chr2	47226916	47239225	chr2:47226916-47239225	3	+	47226916	47226916	8553170	2	98,493,	0,11816,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	47323420	47344989	chr2:47323420-47344989	0	-	47323420	47323420	8553170	4	75,136,93,89,	0,8852,9513,21480,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	47331379	47344989	chr2:47331379-47344989	0	-	47331379	47331379	8553170	4	728,136,93,89,	0,893,1554,13521,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	47335314	47335514	chr2:47335314-47335514	3	+	47335314	47335314	789624	1	200,	0,
#Partially deleted in new
chr2	47345157	47386900	chr2:47345157-47386900	1	+	47369075	47386613	789624	10	66,308,108,241,66,64,102,201,45,329,	0,23770,28305,28650,30076,31856,33795,34611,40008,41414,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	47345162	47387601	chr2:47345162-47387601	0	+	47369075	47386613	789624	11	61,308,108,241,66,64,102,201,45,261,44,	0,23765,28300,28645,30071,31851,33790,34606,40003,41409,42395,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	47359504	47359777	chr2:47359504-47359777	3	-	47359504	47359504	8553170	1	273,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	47369147	47387034	chr2:47369147-47387034	3	+	47369505	47386613	0	9	434,108,241,66,64,102,201,45,463,	0,4315,4660,6086,7866,9805,10621,16018,17424,
#Partially deleted in new
chr2	47369474	47375254	chr2:47369474-47375254	0	+	47369474	47369474	8553170	3	107,586,21,	0,3988,5759,
#Partially deleted in new
chr2	47369494	47373993	chr2:47369494-47373993	0	+	47369505	47373993	789624	3	315,108,186,	0,3968,4313,
#Partially deleted in new
chr2	47373774	47385210	chr2:47373774-47385210	0	+	47373774	47373774	8553170	6	274,66,64,102,201,45,	0,1459,3239,5178,5994,11391,
#Deleted in new
chr2	47377674	47377770	chr2:47377674-47377770	3	+	47377674	47377674	5263520	1	96,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	47383159	47383421	chr2:47383159-47383421	3	+	47383159	47383159	8553170	1	262,	0,
#Partially deleted in new
chr2	47402968	47483228	chr2:47402968-47483228	3	+	47403191	47482949	0	16	434,155,279,147,150,134,200,110,124,151,98,246,205,248,176,450,	0,5432,7125,9445,11300,13327,26773,42579,60062,63689,67996,72056,73398,75303,77727,79810,
#Partially deleted in new
chr2	47403066	47410346	chr2:47403066-47410346	0	+	47403389	47410346	789624	4	109,43,155,253,	0,293,5334,7027,
#Partially deleted in new
chr2	47403066	47483227	chr2:47403066-47483227	1	+	47403389	47482949	0	17	109,43,155,279,147,150,134,200,110,124,151,98,246,205,248,176,449,	0,293,5334,7027,9347,11202,13229,26675,42481,59964,63591,67898,71958,73300,75205,77629,79712,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr2	47403118	47663146	chr2:47403118-47663146	0	+	47403191	47471003	789624	20	284,155,279,147,150,134,200,110,124,151,75,246,205,248,176,118,190,84,93,2174,	0,5282,6975,9295,11150,13177,26623,42429,59912,63539,67869,71906,73248,75153,77577,109184,204273,229683,254081,257854,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	47403118	47567156	chr2:47403118-47567156	1	+	47403191	47562111	789624	17	284,155,279,147,150,134,200,110,124,151,98,246,205,248,176,118,5068,	0,5282,6975,9295,11150,13177,26623,42429,59912,63539,67846,71906,73248,75153,77577,109184,158970,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr2	47403118	47634309	chr2:47403118-47634309	0	+	47403191	47607456	789624	18	284,155,279,147,150,134,200,110,124,151,98,246,205,248,176,118,190,1508,	0,5282,6975,9295,11150,13177,26623,42429,59912,63539,67846,71906,73248,75153,77577,109184,204273,229683,
#Partially deleted in new
chr2	47403129	47513234	chr2:47403129-47513234	1	+	47403191	47512434	789624	16	273,155,279,147,150,134,200,110,124,151,98,246,205,248,176,932,	0,5271,6964,9284,11139,13166,26612,42418,59901,63528,67835,71895,73237,75142,77566,109173,
#Partially deleted in new
chr2	47476508	47513063	chr2:47476508-47513063	0	+	47476508	47510055	789624	6	63,248,176,286,129,761,	0,1763,4187,33529,34314,35794,
#Partially deleted in new
chr2	47516580	47570939	chr2:47516580-47570939	3	-	47520906	47570331	789624	2	5228,999,	0,53360,
#Deleted in new
chr2	47527007	47529164	chr2:47527007-47529164	3	+	47527007	47527007	8553170	2	797,102,	0,2055,
#Deleted in new
chr2	47527536	47529164	chr2:47527536-47529164	1	+	47527536	47527536	789624	3	268,68,98,	0,764,1530,
#Partially deleted in new
chr2	47527770	47535199	chr2:47527770-47535199	0	+	47527770	47527770	8553170	2	34,328,	0,7101,
#Partially deleted in new
chr2	47543343	47570315	chr2:47543343-47570315	0	-	47543343	47543343	8553170	2	458,375,	0,26597,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	47555858	47562311	chr2:47555858-47562311	0	+	47555858	47555858	8553170	2	90,223,	0,6230,
#Partially deleted in new
chr2	47690715	47691246	chr2:47690715-47691246	7	-	47690715	47690715	16724991	1	531,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	47695529	47709833	chr2:47695529-47709833	0	+	47695529	47695529	8553170	2	568,1651,	0,12653,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	47695815	47757793	chr2:47695815-47757793	0	+	47695815	47695815	8553170	4	282,222,116,105,	0,12393,41575,61873,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	47695818	47791116	chr2:47695818-47791116	0	+	47790963	47791116	789624	4	279,248,116,190,	0,12364,41572,95108,
#Deleted in new
chr2	47705467	47705979	chr2:47705467-47705979	7	+	47705467	47705467	16724991	2	193,202,	0,310,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	47731401	47732035	chr2:47731401-47732035	7	-	47731401	47731401	16724991	1	634,	0,
#Deleted in new
chr2	47781378	47781465	chr2:47781378-47781465	3	+	47781378	47781378	8553170	1	87,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	47783081	47810101	chr2:47783081-47810101	3	+	47783233	47806860	0	10	412,197,170,2545,266,118,90,155,200,3323,	0,7845,12812,15529,20338,21828,22536,23122,23370,23697,
#Partially deleted in new
chr2	47783081	47806953	chr2:47783081-47806953	0	+	47783233	47798636	789624	9	412,197,2545,266,118,90,155,200,175,	0,7845,15529,20338,21828,22536,23122,23370,23697,
#Partially deleted in new
chr2	47783081	47806945	chr2:47783081-47806945	1	+	47783233	47806860	0	8	389,2545,266,118,90,155,200,167,	0,15529,20338,21828,22536,23122,23370,23697,
#Partially deleted in new
chr2	47783081	47806945	chr2:47783081-47806945	1	+	47798889	47806860	0	9	412,197,2545,266,118,90,155,200,167,	0,7845,15529,20338,21828,22536,23122,23370,23697,
#Partially deleted in new
chr2	47783081	47806952	chr2:47783081-47806952	1	+	47801079	47806860	789624	13	412,197,170,2545,209,49,126,90,104,36,12,200,174,	0,7845,12812,15529,20338,20548,21820,22536,23122,23228,23265,23370,23697,
#Partially deleted in new
chr2	47783127	47798920	chr2:47783127-47798920	0	+	47783233	47795948	789624	3	366,170,310,	0,12766,15483,
#Partially deleted in new
chr2	47783150	47801332	chr2:47783150-47801332	1	+	47783233	47801190	789624	6	185,66,89,197,170,2722,	0,187,254,7776,12743,15460,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	47783169	47784976	chr2:47783169-47784976	0	+	47783169	47783169	8553170	2	324,489,	0,1318,
#Partially deleted in new
chr2	47783584	47798627	chr2:47783584-47798627	0	+	47790963	47798627	789624	4	194,197,170,17,	0,7342,12309,15026,
#Partially deleted in new
chr2	47783954	47796036	chr2:47783954-47796036	0	+	47790963	47796036	789624	3	151,197,143,	0,6972,11939,
#Partially deleted in new
chr2	47783954	47806945	chr2:47783954-47806945	1	+	47798889	47806860	0	10	151,197,170,2541,266,118,90,155,200,167,	0,6972,11939,14660,19465,20955,21663,22249,22497,22824,
#Partially deleted in new
chr2	47784180	47798733	chr2:47784180-47798733	0	+	47790963	47798733	789624	4	58,197,170,123,	0,6746,11713,14430,
#Partially deleted in new
chr2	47789315	47809251	chr2:47789315-47809251	0	-	47808117	47809174	789624	4	125,254,99,94,	0,18678,19013,19842,
#Partially deleted in new
chr2	47789321	47809185	chr2:47789321-47809185	1	-	47789435	47809174	789624	4	119,53,99,28,	0,18873,19007,19836,
#Deleted in new
chr2	47797825	47798091	chr2:47797825-47798091	7	-	47797825	47797825	16724991	1	266,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	47806751	47811661	chr2:47806751-47811661	0	-	47806751	47806751	8553170	5	1496,99,109,108,1346,	0,1577,2406,2848,3564,
#Partially deleted in new
chr2	47806919	47888719	chr2:47806919-47888719	3	-	47808117	47839749	0	23	1328,99,109,108,111,144,77,86,123,95,86,218,138,107,112,107,133,84,130,145,82,128,94,	0,1409,2238,2680,3396,6314,6871,11859,12036,13442,15298,16223,25429,25652,25849,26044,27659,27868,28952,31939,32499,32722,81706,
#Partially deleted in new
chr2	47806919	47905793	chr2:47806919-47905793	1	-	47808117	47905720	0	23	1328,99,109,108,111,144,77,86,123,95,86,218,138,107,112,107,133,84,130,145,82,128,305,	0,1409,2238,2680,3396,6314,6871,11859,12036,13442,15298,16223,25429,25652,25849,26044,27659,27868,28952,31939,32499,32722,98569,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	47809229	47814298	chr2:47809229-47814298	0	-	47809229	47809229	8553170	5	37,108,111,144,508,	0,370,1086,4004,4561,
#Partially deleted in new
chr2	47812848	47835962	chr2:47812848-47835962	0	-	47813147	47835962	789624	14	529,77,86,123,95,86,218,138,107,112,107,133,84,91,	0,942,5930,6107,7513,9369,10294,19500,19723,19920,20115,21730,21939,23023,
#Partially deleted in new
chr2	47818416	47905568	chr2:47818416-47905568	0	-	47818416	47818416	8553170	16	448,123,95,86,218,138,107,112,107,133,84,130,145,82,128,80,	0,539,1945,3801,4726,13932,14155,14352,14547,16162,16371,17455,20442,21002,21225,87072,
#Partially deleted in new
chr2	47835914	47905210	chr2:47835914-47905210	0	-	47835914	47839749	789624	5	87,145,82,128,118,	0,2944,3504,3727,69178,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	47835951	47888719	chr2:47835951-47888719	0	-	47835951	47835951	8553170	6	50,145,82,128,101,94,	0,2907,3467,3690,29840,52674,
#Deleted in new
chr2	47883454	47883909	chr2:47883454-47883909	7	+	47883454	47883454	16724991	1	455,	0,
#Deleted in new
chr2	47905677	47907635	chr2:47905677-47907635	0	+	47905677	47905677	8553170	2	122,318,	0,1640,
#Deleted in new
chr2	47906081	47907656	chr2:47906081-47907656	0	+	47906081	47906081	8553170	2	78,339,	0,1236,
#Deleted in new
chr2	47906829	47907810	chr2:47906829-47907810	3	+	47906829	47906829	8553170	2	163,493,	0,488,
#Deleted in new
chr2	47939737	47940218	chr2:47939737-47940218	7	-	47939737	47939737	16724991	1	481,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	47941695	48240983	chr2:47941695-48240983	1	-	47941695	47941695	8553170	9	1123,82,136,26,75,126,47,137,56,	0,1835,3456,6688,55020,61604,223192,238626,299232,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	47942733	48180341	chr2:47942733-48180341	1	-	47942733	47942733	8553170	9	328,82,136,26,75,126,134,47,20,	0,797,2418,5650,53982,60566,206241,222154,237588,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	47945255	48164934	chr2:47945255-48164934	2	-	47945255	47945255	8553170	11	32,234,144,285,75,126,129,71,67,143,47,	0,4972,17177,49891,51460,58044,59566,74104,77081,164280,219632,
#Deleted in new
chr2	47989624	47990526	chr2:47989624-47990526	7	+	47989624	47989624	16724991	1	902,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	48217574	48217899	chr2:48217574-48217899	3	+	48217574	48217574	8553170	1	325,	0,
#Partially deleted in new
chr2	48314636	48373328	chr2:48314636-48373328	0	+	48346214	48373328	789624	5	178,551,101,65,37,	0,31564,44410,48006,58655,
#Partially deleted in new
chr2	48314709	48379294	chr2:48314709-48379294	3	+	48346214	48375443	789624	7	105,142,551,101,65,69,4375,	0,13851,31491,44337,47933,58582,60210,
#Partially deleted in new
chr2	48346216	48375565	chr2:48346216-48375565	1	+	48346485	48375443	789624	6	314,219,101,65,69,646,	0,316,12830,16426,27075,28703,
#Deleted in new
chr2	48440042	48440597	chr2:48440042-48440597	3	-	48440042	48440042	8553170	1	555,	0,
#Partially deleted in new
chr2	48440597	48511468	chr2:48440597-48511468	0	+	48454606	48458028	789624	21	101,69,147,226,165,59,95,53,150,102,89,137,93,128,153,93,243,33,117,99,129,	0,10410,13997,17404,19156,19497,20540,24339,24895,30489,30681,34085,39326,46033,50420,55081,57895,64966,66671,69417,70742,
#Partially deleted in new
chr2	48440768	48515386	chr2:48440768-48515386	1	+	48440953	48514744	789624	21	242,69,147,102,165,59,95,53,150,102,89,137,93,128,153,93,243,117,99,129,672,	0,10239,13826,17357,18985,19326,20369,24168,24724,30318,30510,33914,39155,45862,50249,54910,57724,66500,69246,70571,73946,
#Partially deleted in new
chr2	48440768	48515385	chr2:48440768-48515385	0	+	48440953	48454594	789624	22	242,69,186,102,165,59,95,53,150,102,89,137,93,128,153,93,243,33,117,99,129,671,	0,10239,13787,17357,18985,19326,20369,24168,24724,30318,30510,33914,39155,45862,50249,54910,57724,64795,66500,69246,70571,73946,
#Partially deleted in new
chr2	48440768	48515391	chr2:48440768-48515391	1	+	48440953	48514744	789624	20	242,69,147,102,165,59,95,53,150,102,89,137,93,128,153,243,117,99,129,677,	0,10239,13826,17357,18985,19326,20369,24168,24724,30318,30510,33914,39155,45862,50249,57724,66500,69246,70571,73946,
#Partially deleted in new
chr2	48440796	48515386	chr2:48440796-48515386	3	+	48440953	48514744	789624	22	214,69,147,102,165,59,95,53,150,102,89,137,93,128,153,93,243,33,117,99,129,672,	0,10211,13798,17329,18957,19298,20341,24140,24696,30290,30482,33886,39127,45834,50221,54882,57696,64767,66472,69218,70543,73918,
#Partially deleted in new
chr2	48441128	48454728	chr2:48441128-48454728	0	+	48454606	48454728	789624	3	342,69,134,	0,9879,13466,
#Partially deleted in new
chr2	48464965	48471450	chr2:48464965-48471450	0	+	48464965	48464965	8553170	4	24,150,102,172,	0,527,6121,6313,
#Partially deleted in new
chr2	48471310	48498501	chr2:48471310-48498501	0	+	48471310	48480005	789624	8	57,137,73,93,128,153,93,9,	0,3372,8173,8613,15320,19707,24368,27182,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	48501921	48502024	chr2:48501921-48502024	3	-	48501921	48501921	8553170	1	103,	0,
#Partially deleted in new
chr2	48507210	48515386	chr2:48507210-48515386	0	+	48507210	48507210	8553170	4	175,99,129,672,	0,2804,4129,7504,
#Deleted in new
chr2	48529382	48531917	chr2:48529382-48531917	0	+	48529382	48529382	8553170	2	205,2038,	0,497,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	48529545	48598502	chr2:48529545-48598502	3	+	48580633	48595302	8553170	5	42,109,1977,203,3275,	0,334,51041,62107,65682,
#Partially deleted in new
chr2	48529924	48776517	chr2:48529924-48776517	1	+	48580633	48776315	789624	11	64,1977,203,102,124,56,85,590,261,90,238,	0,50662,61728,90926,91242,112477,115108,116528,139797,141666,246355,
#Partially deleted in new
chr2	48529924	48679603	chr2:48529924-48679603	3	+	48580633	48679442	789624	11	64,1977,203,102,124,56,85,590,261,90,269,	0,50662,61728,90926,91242,112477,115108,116528,139797,141666,149410,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	48530170	48598512	chr2:48530170-48598512	1	+	48580633	48595302	789624	4	46,1977,203,3285,	0,50416,61482,65057,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	48530185	48598513	chr2:48530185-48598513	1	+	48580633	48595302	789624	5	31,117,1977,203,3286,	0,527,50401,61467,65042,
#Partially deleted in new
chr2	48569019	48679603	chr2:48569019-48679603	1	+	48580633	48679442	789624	11	67,1977,203,102,124,56,85,590,261,90,269,	0,11567,22633,51831,52147,73382,76013,77433,100702,102571,110315,
#Partially deleted in new
chr2	48580606	48679541	chr2:48580606-48679541	1	+	48580633	48679442	789624	8	1957,203,102,124,590,261,90,207,	0,11046,40244,40560,65846,89115,90984,98728,
#Partially deleted in new
chr2	48582295	48595854	chr2:48582295-48595854	0	+	48582295	48591758	789624	3	268,111,627,	0,9449,12932,
#Partially deleted in new
chr2	48617797	48679605	chr2:48617797-48679605	1	+	48617874	48679442	789624	8	98,124,56,85,590,261,90,271,	0,3369,24604,27235,28655,51924,53793,61537,
#Partially deleted in new
chr2	48617797	48647042	chr2:48617797-48647042	0	+	48617874	48647042	789624	6	98,102,151,56,85,590,	0,3053,3369,24604,27235,28655,
#Partially deleted in new
chr2	48617797	48646660	chr2:48617797-48646660	0	+	48617874	48646660	789624	5	98,124,56,85,208,	0,3369,24604,27235,28655,
#Partially deleted in new
chr2	48617837	48679607	chr2:48617837-48679607	3	+	48617874	48679442	789624	9	58,102,124,56,85,590,261,90,273,	0,3013,3329,24564,27195,28615,51884,53753,61497,
#Partially deleted in new
chr2	48617847	48646598	chr2:48617847-48646598	0	+	48617874	48642410	789624	5	48,138,56,85,146,	0,3319,24554,27185,28605,
#Partially deleted in new
chr2	48617855	48646553	chr2:48617855-48646553	0	+	48617855	48617855	8553170	7	40,92,102,124,56,85,101,	0,168,2995,3311,24546,27177,28597,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	48632290	48755724	chr2:48632290-48755724	3	-	48698753	48755671	789624	13	831,185,91,96,81,161,75,69,78,75,75,72,214,	0,14139,14738,36279,61933,66324,76657,81695,91165,91331,93385,98936,123220,
#Partially deleted in new
chr2	48632855	48633353	chr2:48632855-48633353	7	-	48632855	48632855	16724991	1	498,	0,
#Partially deleted in new
chr2	48669796	48733148	chr2:48669796-48733148	0	+	48669796	48732925	789624	3	186,90,256,	0,1794,63096,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	48686774	48755693	chr2:48686774-48755693	3	-	48687696	48755671	0	11	2075,81,186,75,69,78,75,75,75,72,183,	0,7449,11840,22173,27211,36681,36847,38901,42378,44452,68736,
#Partially deleted in new
chr2	48687642	48755671	chr2:48687642-48755671	1	-	48687696	48755671	789624	10	1207,186,75,69,78,75,75,75,72,161,	0,10972,21305,26343,35813,35979,38033,41510,43584,67868,
#Partially deleted in new
chr2	48687668	48755730	chr2:48687668-48755730	1	-	48688108	48755671	789624	11	471,81,186,75,69,78,75,75,75,72,220,	0,6555,10946,21279,26317,35787,35953,38007,41484,43558,67842,
#Partially deleted in new
chr2	48687668	48755730	chr2:48687668-48755730	1	-	48688540	48755671	789624	11	915,81,186,75,69,78,75,75,75,72,220,	0,6555,10946,21279,26317,35787,35953,38007,41484,43558,67842,
#Partially deleted in new
chr2	48708769	48723514	chr2:48708769-48723514	0	-	48708769	48708769	8553170	3	253,69,59,	0,5216,14686,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	48720039	48755569	chr2:48720039-48755569	0	-	48721685	48755569	789624	7	1740,78,75,75,75,72,59,	0,3416,3582,5636,9113,11187,35471,
#Partially deleted in new
chr2	48768953	48776481	chr2:48768953-48776481	0	+	48768953	48768953	8553170	2	168,202,	0,7326,
#Partially deleted in new
chr2	48768961	48776481	chr2:48768961-48776481	0	+	48768961	48768961	8553170	2	113,202,	0,7318,
#Deleted in new
chr2	48780601	48780895	chr2:48780601-48780895	7	+	48780601	48780601	16724991	1	294,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	48809339	49419013	chr2:48809339-49419013	3	+	48809339	48809339	8553170	5	302,190,744,93,1369,	0,136876,598862,603711,608305,
#Deleted in new
chr2	48915266	48916530	chr2:48915266-48916530	7	-	48915266	48915266	16724991	1	1264,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	48962156	49154537	chr2:48962156-49154537	3	-	48962732	49154417	789624	10	1810,186,75,69,78,72,75,75,72,272,	0,6541,20755,20941,26820,28409,55332,57929,106062,192109,
#Partially deleted in new
chr2	48962630	49154481	chr2:48962630-49154481	1	-	48962732	49154417	789624	9	1336,186,75,69,72,75,75,72,216,	0,6067,20281,20467,27935,54858,57455,105588,191635,
#Partially deleted in new
chr2	48963799	49154433	chr2:48963799-49154433	0	-	48963799	49154417	789624	9	167,75,69,78,72,75,75,72,168,	0,19112,19298,25177,26766,53689,56286,104419,190466,
#Partially deleted in new
chr2	48968764	48997313	chr2:48968764-48997313	0	-	48968764	48968764	8553170	6	119,75,69,78,72,135,	0,14147,14333,20212,21801,28414,
#Partially deleted in new
chr2	48983115	49154527	chr2:48983115-49154527	0	-	49014862	49154417	789624	8	51,78,72,251,75,75,72,262,	0,5861,7450,31581,34373,36970,85103,171150,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	49202125	49451896	chr2:49202125-49451896	1	-	49202125	49202125	8553170	7	562,233,60,167,107,80,220,	0,13889,15928,16336,129748,224406,249551,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	49233793	49233899	chr2:49233793-49233899	3	-	49233793	49233793	8553170	1	106,	0,
#Partially deleted in new
chr2	49308143	49426633	chr2:49308143-49426633	3	-	49308143	49308143	8553170	4	581,107,64,102,	0,23730,31367,118388,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	49563397	49595122	chr2:49563397-49595122	3	+	49563397	49563397	8553170	3	72,102,499,	0,29590,31226,
#Partially deleted in new
chr2	49878622	49879363	chr2:49878622-49879363	7	+	49878622	49878622	16724991	1	741,	0,
#Deleted in new
chr2	49888867	49888986	chr2:49888867-49888986	3	-	49888867	49888867	8553170	1	119,	0,
#Partially deleted in new
chr2	49918504	51032561	chr2:49918504-51032561	3	-	49921943	51028273	789624	22	3747,88,320,172,182,120,174,191,382,123,27,204,384,439,162,24,302,12,30,18,1693,581,	0,25199,134766,172818,318284,546937,553793,577400,578828,587990,610120,612722,619748,634082,701517,702721,704809,1003364,1004153,1007433,1108997,1113476,
#Partially deleted in new
chr2	49918504	51028456	chr2:49918504-51028456	1	-	49921943	51028273	789624	21	3747,79,320,90,172,182,120,174,191,382,123,27,204,384,439,162,302,12,30,18,955,	0,25208,134766,136450,172818,318284,546937,553793,577400,578828,587990,610120,612722,619748,634082,701517,704809,1003364,1004153,1007433,1108997,
#Partially deleted in new
chr2	49918895	49974115	chr2:49918895-49974115	1	-	49921943	49974000	789624	3	3356,88,151,	0,24808,55069,
#Partially deleted in new
chr2	49918898	49974115	chr2:49918898-49974115	0	-	49918898	49918898	8553170	4	3353,79,94,148,	0,24814,26214,55069,
#Partially deleted in new
chr2	49918901	49974118	chr2:49918901-49974118	0	-	49918901	49918901	8553170	4	3350,79,112,151,	0,24811,53769,55066,
#Partially deleted in new
chr2	49919068	49974155	chr2:49919068-49974155	1	-	49926313	49974000	789624	4	3183,103,79,188,	0,7219,24644,54899,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	49920089	49974107	chr2:49920089-49974107	0	-	49920089	49920089	8553170	4	2162,88,931,140,	0,23614,49597,53878,
#Partially deleted in new
chr2	49920347	49974199	chr2:49920347-49974199	1	-	49921943	49974000	789624	3	1904,79,232,	0,23365,53620,
#Partially deleted in new
chr2	49920349	51032399	chr2:49920349-51032399	1	-	49921943	51028273	789624	24	1902,88,320,90,172,182,120,174,191,382,123,27,204,384,439,162,45,302,12,30,18,99,1693,419,	0,23354,132921,134605,170973,316439,545092,551948,575555,576983,586145,608275,610877,617903,632237,699672,700855,702964,1001519,1002308,1005588,1106021,1107152,1111631,
#Partially deleted in new
chr2	49920363	49974166	chr2:49920363-49974166	0	-	49920363	49920363	8553170	4	1888,79,83,199,	0,23349,46226,53604,
#Partially deleted in new
chr2	49920762	50347754	chr2:49920762-50347754	1	-	49921943	50346949	0	6	1489,88,320,172,182,1064,	0,22941,132508,170560,316026,425928,
#Partially deleted in new
chr2	49921237	49974203	chr2:49921237-49974203	1	-	49921943	49974000	789624	3	1014,88,236,	0,22466,52730,
#Partially deleted in new
chr2	49921306	50347766	chr2:49921306-50347766	1	-	49921943	50346949	0	7	945,88,320,90,172,182,1076,	0,22397,131964,133648,170016,315482,425384,
#Partially deleted in new
chr2	49921585	50346832	chr2:49921585-50346832	0	-	50185602	50346832	789624	7	666,88,320,172,109,182,142,	0,22118,131685,169737,263956,315203,425105,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	49921630	50016545	chr2:49921630-50016545	0	-	49921630	49921630	8553170	3	621,88,48,	0,22073,94867,
#Partially deleted in new
chr2	49921641	50347254	chr2:49921641-50347254	1	-	49921943	50053471	789624	7	610,88,320,172,182,160,325,	0,22062,131629,169681,315147,425049,425288,
#Partially deleted in new
chr2	49921738	51032200	chr2:49921738-51032200	1	-	49921943	51028273	789624	23	513,88,320,90,172,182,120,174,191,382,123,27,204,384,439,162,24,302,12,30,18,1693,220,	0,21965,131532,133216,169584,315050,543703,550559,574166,575594,584756,606886,609488,616514,630848,698283,699487,701575,1000130,1000919,1004199,1105763,1110242,
#Partially deleted in new
chr2	49921742	49973939	chr2:49921742-49973939	1	-	49921943	49922171	789624	4	509,79,82,167,	0,21970,51239,52030,
#Partially deleted in new
chr2	49921755	50019275	chr2:49921755-50019275	0	-	49921755	49921755	8553170	3	496,88,39,	0,21948,97481,
#Partially deleted in new
chr2	49921756	50347796	chr2:49921756-50347796	1	-	49921943	50346949	789624	7	495,79,320,90,172,182,1106,	0,21956,131514,133198,169566,315032,424934,
#Partially deleted in new
chr2	49921762	51032114	chr2:49921762-51032114	1	-	49921943	51028273	789624	21	489,88,320,90,172,182,120,174,191,382,123,27,204,384,439,162,302,30,18,1693,134,	0,21941,131508,133192,169560,315026,543679,550535,574142,575570,584732,606862,609464,616490,630824,698259,701551,1000895,1004175,1105739,1110218,
#Partially deleted in new
chr2	49921943	51028273	chr2:49921943-51028273	1	-	49921943	51028273	789624	21	308,88,320,90,172,182,120,174,191,382,123,27,204,384,439,162,302,12,30,18,772,	0,21760,131327,133011,169379,314845,543498,550354,573961,575389,584551,606681,609283,616309,630643,698078,701370,999925,1000714,1003994,1105558,
#Partially deleted in new
chr2	49921994	50417255	chr2:49921994-50417255	0	-	49921994	49921994	8553170	7	257,88,320,90,172,182,173,	0,21709,131276,132960,169328,314794,495088,
#Partially deleted in new
chr2	50022691	50497378	chr2:50022691-50497378	0	-	50022691	50022691	8553170	9	1422,320,90,172,182,120,174,191,46,	0,30579,32263,68631,214097,442750,449606,473213,474641,
#Partially deleted in new
chr2	50105234	50236840	chr2:50105234-50236840	0	-	50105234	50105234	8553170	2	48,52,	0,131554,
#Partially deleted in new
chr2	50174650	50623370	chr2:50174650-50623370	0	-	50174650	50174650	8553170	13	565,182,120,174,191,382,123,27,204,384,439,162,57,	0,62138,290791,297647,321254,322682,331844,353974,356576,363602,377936,445371,448663,
#Partially deleted in new
chr2	50199136	50656414	chr2:50199136-50656414	0	-	50207690	50656388	789624	14	153,165,182,120,174,191,382,123,204,384,439,162,302,63,	0,8401,37652,266305,273161,296768,298196,307358,332090,339116,353450,420885,424177,457215,
#Partially deleted in new
chr2	50236822	50496076	chr2:50236822-50496076	0	-	50236822	50496076	789624	5	148,120,27,174,172,	0,228619,229638,235475,259082,
#Partially deleted in new
chr2	50236922	50432324	chr2:50236922-50432324	0	-	50236922	50236922	8553170	2	48,52,	0,195350,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	50324642	50345598	chr2:50324642-50345598	3	+	50324642	50324642	8553170	3	70,173,974,	0,11266,19982,
#Deleted in new
chr2	50463967	50465492	chr2:50463967-50465492	0	-	50463967	50463967	8553170	2	49,51,	0,1474,
#Deleted in new
chr2	50464429	50465511	chr2:50464429-50465511	0	-	50464429	50464429	8553170	2	30,70,	0,1012,
#Partially deleted in new
chr2	50465404	50495933	chr2:50465404-50495933	0	-	50465404	50465404	8553170	3	157,174,29,	0,6893,30500,
#Partially deleted in new
chr2	50465442	50623616	chr2:50465442-50623616	1	-	50465442	50623616	789624	11	119,174,191,382,123,27,204,384,439,162,303,	0,6855,30462,31890,41052,63182,65784,72810,87144,154579,157871,
#Partially deleted in new
chr2	50465442	50623616	chr2:50465442-50623616	1	-	50465442	50623616	789624	12	119,174,191,382,123,27,204,384,439,162,45,303,	0,6855,30462,31890,41052,63182,65784,72810,87144,154579,155762,157871,
#Partially deleted in new
chr2	50497574	50528935	chr2:50497574-50528935	0	-	50497574	50497574	8553170	3	140,123,311,	0,8920,31050,
#Partially deleted in new
chr2	50497670	50506940	chr2:50497670-50506940	0	-	50497670	50497670	8553170	2	44,446,	0,8824,
#Partially deleted in new
chr2	50497678	50620052	chr2:50497678-50620052	0	-	50497678	50620052	789624	3	36,439,31,	0,54908,122343,
#Partially deleted in new
chr2	50506599	50526787	chr2:50506599-50526787	0	-	50506599	50506599	8553170	2	18,82,	0,20106,
#Partially deleted in new
chr2	50538573	50548182	chr2:50538573-50548182	0	-	50538573	50538573	8553170	2	63,37,	0,9572,
#Partially deleted in new
chr2	50538574	50551308	chr2:50538574-50551308	0	-	50538574	50538574	8553170	2	62,38,	0,12696,
#Partially deleted in new
chr2	50538614	50552610	chr2:50538614-50552610	0	-	50538614	50552610	789624	3	22,54,24,	0,8855,13972,
#Partially deleted in new
chr2	50548182	50552648	chr2:50548182-50552648	0	-	50548182	50548182	8553170	2	38,62,	0,4404,
#Deleted in new
chr2	50551289	50552613	chr2:50551289-50552613	0	-	50551289	50551289	8553170	2	94,27,	0,1297,
#Partially deleted in new
chr2	50554416	50620049	chr2:50554416-50620049	0	-	50554416	50554416	8553170	2	72,28,	0,65605,
#Deleted in new
chr2	50588689	50589415	chr2:50588689-50589415	7	-	50588689	50588689	16724991	1	726,	0,
#Partially deleted in new
chr2	50615347	50656399	chr2:50615347-50656399	0	-	50624833	50656388	789624	5	1151,162,302,160,48,	0,4674,7966,9460,41004,
#Partially deleted in new
chr2	50619106	51032151	chr2:50619106-51032151	1	-	50619877	51028273	789624	4	1077,302,1693,171,	0,4207,408395,412874,
#Partially deleted in new
chr2	50619294	50656410	chr2:50619294-50656410	1	-	50619905	50656388	789624	4	674,129,302,59,	0,760,4019,37057,
#Partially deleted in new
chr2	50619644	50637564	chr2:50619644-50637564	0	-	50619644	50619644	8553170	4	324,129,302,41,	0,410,3669,17879,
#Partially deleted in new
chr2	50620962	50632993	chr2:50620962-50632993	3	+	50620962	50620962	8553170	4	49,93,107,646,	0,3848,10314,11385,
#Partially deleted in new
chr2	50623355	50985428	chr2:50623355-50985428	0	-	50623355	50623355	8553170	7	260,84,115,12,30,18,55,	0,217705,289523,298513,299302,302582,362018,
#Deleted in new
chr2	50696171	50696262	chr2:50696171-50696262	3	-	50696171	50696171	5263520	1	91,	0,
#Partially deleted in new
chr2	50757979	51027703	chr2:50757979-51027703	0	-	50758086	51027703	789624	6	157,12,30,18,99,202,	0,163889,164678,167958,268391,269522,
#Deleted in new
chr2	50829441	50829678	chr2:50829441-50829678	7	-	50829441	50829441	16724991	1	237,	0,
#Deleted in new
chr2	50912206	50912931	chr2:50912206-50912931	0	-	50912206	50912206	8553170	2	47,53,	0,672,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	50916821	51032120	chr2:50916821-51032120	1	-	50920001	51028273	789624	6	3185,12,30,18,1693,140,	0,5047,5836,9116,110680,115159,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	50916825	51027830	chr2:50916825-51027830	0	-	50919191	51027830	789624	5	2443,12,30,18,329,	0,5043,5832,9112,110676,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	50916847	51032101	chr2:50916847-51032101	1	-	50918574	51028273	789624	6	1777,12,30,18,1693,121,	0,5021,5810,9090,110654,115133,
#Partially deleted in new
chr2	50919769	51032536	chr2:50919769-51032536	1	-	50920001	51028273	789624	6	237,12,30,15,1693,556,	0,2099,2888,6168,107732,112211,
#Partially deleted in new
chr2	50922520	51027798	chr2:50922520-51027798	0	-	50922604	51027798	789624	2	167,297,	0,104981,
#Partially deleted in new
chr2	51009244	51027567	chr2:51009244-51027567	0	-	51009244	51009244	8553170	2	34,66,	0,18257,
#Partially deleted in new
chr2	51028373	51082864	chr2:51028373-51082864	0	-	51028373	51028373	8553170	4	821,136,116,173,	0,44394,53016,54318,
#Deleted in new
chr2	51029164	51032469	chr2:51029164-51032469	0	-	51029164	51029164	8553170	2	30,64,	0,3241,
#Deleted in new
chr2	51029164	51033038	chr2:51029164-51033038	0	-	51029164	51029164	8553170	2	30,70,	0,3804,
#Deleted in new
chr2	51032204	51032443	chr2:51032204-51032443	0	-	51032204	51032204	8553170	2	62,38,	0,201,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	51032600	52407917	chr2:51032600-52407917	3	+	51032600	51032600	789624	11	416,98,101,79,59,86,40,69,1962,89,940,	0,19756,295788,345494,495001,729488,828848,1283631,1316724,1320273,1374377,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	51032738	51225564	chr2:51032738-51225564	0	-	51032738	51032738	8553170	4	396,136,125,58,	0,40029,188932,192768,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	51201866	51225564	chr2:51201866-51225564	0	-	51201866	51201866	8553170	4	448,158,125,58,	0,1124,19804,23640,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	51201925	51225528	chr2:51201925-51225528	0	-	51201925	51201925	8553170	4	389,158,125,64,	0,1065,19745,23539,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	51201932	51225532	chr2:51201932-51225532	0	-	51201932	51201932	8553170	4	382,221,125,26,	0,995,19738,23574,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	51201942	51221764	chr2:51201942-51221764	0	-	51201942	51201942	8553170	3	372,171,94,	0,1048,19728,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	51201942	51225575	chr2:51201942-51225575	0	-	51201942	51201942	8553170	4	372,185,125,54,	0,1048,19728,23579,
#Deleted in new
chr2	51511057	51511483	chr2:51511057-51511483	7	+	51511057	51511057	16724991	1	426,	0,
#Deleted in new
chr2	51775257	51775402	chr2:51775257-51775402	7	-	51775257	51775257	16724991	1	145,	0,
#Deleted in new
chr2	51925691	51925833	chr2:51925691-51925833	7	-	51925691	51925691	16724991	1	142,	0,
#Deleted in new
chr2	51926881	51927362	chr2:51926881-51927362	7	-	51926881	51926881	16724991	1	481,	0,
#Partially deleted in new
chr2	52071354	52077197	chr2:52071354-52077197	7	+	52071354	52071354	16724991	3	67,154,196,	0,4129,5647,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	52297994	52298096	chr2:52297994-52298096	3	+	52297994	52297994	8553170	1	102,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	52373117	52390012	chr2:52373117-52390012	3	+	52373117	52373117	8553170	2	54,550,	0,16345,
#Deleted in new
chr2	52474072	52474411	chr2:52474072-52474411	7	-	52474072	52474072	16724991	1	339,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	52494687	52500752	chr2:52494687-52500752	3	-	52494687	52494687	8553170	4	175,72,183,209,	0,1077,3915,5856,
#Partially deleted in new
chr2	52570647	52572522	chr2:52570647-52572522	7	+	52570647	52570647	16724991	1	1875,	0,
#Deleted in new
chr2	52629742	52630078	chr2:52629742-52630078	7	+	52629742	52629742	16724991	2	136,184,	0,152,
#Partially deleted in new
chr2	52702521	52702615	chr2:52702521-52702615	3	-	52702521	52702521	5263520	1	94,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	52722676	52910020	chr2:52722676-52910020	3	-	52722676	52722676	8553170	5	187,147,36,62,57,	0,3995,10065,174566,187287,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	52722676	52910020	chr2:52722676-52910020	0	-	52722676	52722676	8553170	4	187,147,62,57,	0,3995,174566,187287,
#Partially deleted in new
chr2	52864234	52866631	chr2:52864234-52866631	3	+	52864234	52864234	8553170	2	82,251,	0,2146,
#Deleted in new
chr2	52883242	52883455	chr2:52883242-52883455	7	+	52883242	52883242	16724991	1	213,	0,
#Deleted in new
chr2	53470446	53470629	chr2:53470446-53470629	3	-	53470446	53470446	8553170	1	183,	0,
#Deleted in new
chr2	53486143	53486280	chr2:53486143-53486280	7	-	53486143	53486143	16724991	1	137,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	53532671	53765549	chr2:53532671-53765549	0	-	53604829	53765549	789624	10	1213,89,131,258,198,178,136,113,159,173,	0,72155,161212,167599,181712,183894,196040,196786,218111,232705,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	53570373	53570480	chr2:53570373-53570480	3	-	53570373	53570373	8553170	1	107,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	53581203	53606078	chr2:53581203-53606078	0	-	53581203	53581203	8553170	5	175,134,148,158,159,	0,22181,23070,23554,24716,
#Partially deleted in new
chr2	53669980	53786942	chr2:53669980-53786942	3	-	53670502	53765572	789624	10	710,131,258,198,178,136,113,159,209,122,	0,23903,30290,44403,46585,58731,59477,80802,95396,116840,
#Partially deleted in new
chr2	53670292	53860160	chr2:53670292-53860160	3	-	53670502	53859928	789624	10	398,131,258,198,178,136,113,159,209,333,	0,23591,29978,44091,46273,58419,59165,80490,95084,189535,
#Partially deleted in new
chr2	53670297	53768246	chr2:53670297-53768246	0	-	53670297	53670297	8553170	10	393,131,258,198,178,136,113,159,209,135,	0,23586,29973,44086,46268,58414,59160,80485,95079,97814,
#Partially deleted in new
chr2	53670318	53787009	chr2:53670318-53787009	1	-	53670502	53750918	789624	9	372,131,258,198,178,136,113,159,189,	0,23565,29952,44065,46247,58393,59139,80464,116502,
#Partially deleted in new
chr2	53670318	53786944	chr2:53670318-53786944	1	-	53670502	53750918	789624	9	372,131,258,198,178,136,113,159,660,	0,23565,29952,44065,46247,58393,59139,80464,115966,
#Partially deleted in new
chr2	53670605	53694562	chr2:53670605-53694562	0	-	53670605	53670605	8553170	2	85,679,	0,23278,
#Partially deleted in new
chr2	53714435	53859990	chr2:53714435-53859990	0	-	53714435	53714435	8553170	5	146,178,136,113,163,	0,2130,14276,15022,145392,
#Partially deleted in new
chr2	53714575	53786849	chr2:53714575-53786849	0	-	53714575	53714575	8553170	5	6,178,159,209,29,	0,1990,36207,50801,72245,
#Partially deleted in new
chr2	53728771	53765561	chr2:53728771-53765561	0	-	53728771	53728771	8553170	5	76,113,87,159,185,	0,686,19509,22011,36605,
#Partially deleted in new
chr2	53729460	53767526	chr2:53729460-53767526	0	-	53729460	53729460	8553170	4	110,159,209,82,	0,21322,35916,37984,
#Partially deleted in new
chr2	53750783	53767527	chr2:53750783-53767527	0	-	53750783	53750783	8553170	3	158,209,256,	0,14593,16488,
#Partially deleted in new
chr2	53750914	53859920	chr2:53750914-53859920	0	-	53750914	53750914	8553170	5	27,125,209,102,93,	0,12567,14462,69228,108913,
#Partially deleted in new
chr2	53767791	53775196	chr2:53767791-53775196	3	+	53767886	53774525	789624	3	230,36,1055,	0,4115,6350,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	53787043	53794377	chr2:53787043-53794377	0	+	53787043	53787043	8553170	3	329,123,33,	0,1539,7301,
#Partially deleted in new
chr2	53787079	53818819	chr2:53787079-53818819	3	+	53787210	53817969	789624	14	293,105,81,78,64,35,224,130,162,60,125,78,76,922,	0,7265,8853,10435,10652,11967,14317,14633,21219,22134,25869,27463,27780,30818,
#Partially deleted in new
chr2	53787079	53818819	chr2:53787079-53818819	1	+	53787210	53817969	789624	13	293,105,81,78,64,35,224,130,60,125,78,76,922,	0,7265,8853,10435,10652,11967,14317,14633,22134,25869,27463,27780,30818,
#Partially deleted in new
chr2	53787079	53818220	chr2:53787079-53818220	1	+	53787210	53817969	789624	13	293,105,81,78,64,35,224,130,162,60,125,76,323,	0,7265,8853,10435,10652,11967,14317,14633,21219,22134,25869,27780,30818,
#Deleted in new
chr2	53849121	53849205	chr2:53849121-53849205	3	-	53849121	53849121	5263520	1	84,	0,
#Partially deleted in new
chr2	53852912	53859989	chr2:53852912-53859989	3	-	53853133	53854756	789624	2	1953,162,	0,6915,
#Partially deleted in new
chr2	53864066	53970840	chr2:53864066-53970840	3	-	53866088	53970784	789624	47	1507,139,134,163,156,129,86,209,132,92,105,153,126,70,154,82,130,54,137,210,132,96,63,99,56,57,56,96,158,216,68,70,99,151,65,90,187,266,93,123,75,64,150,45,117,141,298,	0,2018,2680,5309,10272,11560,21623,23192,23791,24654,26037,28741,29607,30940,31516,32737,33803,34234,35814,37283,39958,42531,42739,44253,44443,44717,46008,55084,56126,56822,58450,58982,59254,61472,61892,63327,64050,67768,68601,70538,72020,72697,73324,75889,84354,85076,106476,
#Partially deleted in new
chr2	53864433	53970840	chr2:53864433-53970840	0	-	53923361	53970784	789624	46	1140,139,134,163,156,129,86,209,132,92,105,153,126,70,154,82,130,54,137,210,132,96,63,99,56,57,56,96,158,216,68,70,99,65,90,187,266,93,123,75,64,150,45,117,141,298,	0,1651,2313,4942,9905,11193,21256,22825,23424,24287,25670,28374,29240,30573,31149,32370,33436,33867,35447,36916,39591,42164,42372,43886,44076,44350,45641,54717,55759,56455,58083,58615,58887,61525,62960,63683,67401,68234,70171,71653,72330,72957,75522,83987,84709,106109,
#Partially deleted in new
chr2	53864860	53887316	chr2:53864860-53887316	0	-	53864860	53864860	8553170	7	713,139,134,163,129,86,58,	0,1224,1886,4515,10766,20829,22398,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	53864869	53870960	chr2:53864869-53870960	0	-	53864869	53864869	8553170	3	1354,134,1585,	0,1877,4506,
#Partially deleted in new
chr2	53866147	53881508	chr2:53866147-53881508	0	-	53866147	53866147	8553170	5	76,134,156,129,53,	0,599,8191,9479,15308,
#Deleted in new
chr2	53887416	53888320	chr2:53887416-53888320	0	-	53887416	53887416	8553170	2	51,463,	0,441,
#Deleted in new
chr2	53907972	53908843	chr2:53907972-53908843	0	-	53907972	53907972	8553170	3	446,56,60,	0,537,811,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	53932055	53933169	chr2:53932055-53933169	0	-	53932055	53932055	8553170	2	45,502,	0,612,
#Partially deleted in new
chr2	53936094	53970778	chr2:53936094-53970778	0	-	53936094	53936094	8553170	8	67,64,150,45,66,117,141,236,	0,669,1296,3861,6064,12326,13048,34448,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	53970837	53975376	chr2:53970837-53975376	1	+	53973748	53975306	789624	3	484,98,131,	0,2875,4408,
#Partially deleted in new
chr2	54029551	54030682	chr2:54029551-54030682	7	-	54029551	54029551	16724991	2	315,97,	0,1034,
#Deleted in new
chr2	54051333	54051760	chr2:54051333-54051760	7	+	54051333	54051333	16724991	1	427,	0,
#Partially deleted in new
chr2	54079973	54080280	chr2:54079973-54080280	7	-	54079973	54079973	16724991	1	307,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	54082553	54085066	chr2:54082553-54085066	3	+	54082553	54082553	8553170	2	235,497,	0,2016,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	54115402	54143314	chr2:54115402-54143314	1	+	54115614	54141907	789624	4	354,17,110,1432,	0,20050,23236,26480,
#Partially deleted in new
chr2	54115503	54305026	chr2:54115503-54305026	1	+	54115614	54267323	789624	5	253,17,110,70,339,	0,19949,23135,151792,189184,
#Partially deleted in new
chr2	54115503	54305300	chr2:54115503-54305300	3	+	54115698	54304802	789624	4	253,17,110,613,	0,19949,23135,189184,
#Partially deleted in new
chr2	54115705	54305251	chr2:54115705-54305251	0	+	54115705	54223018	789624	5	51,17,110,87,564,	0,19747,22933,107291,188982,
#Partially deleted in new
chr2	54123178	54305019	chr2:54123178-54305019	1	+	54123383	54304802	789624	3	232,110,332,	0,15460,181509,
#Deleted in new
chr2	54166943	54167007	chr2:54166943-54167007	3	-	54166943	54166943	8553170	1	64,	0,
#Deleted in new
chr2	54253183	54256272	chr2:54253183-54256272	3	-	54254918	54256151	789624	1	3089,	0,
#Partially deleted in new
chr2	54330033	54360350	chr2:54330033-54360350	0	+	54330165	54360350	789624	5	176,208,154,116,148,	0,4783,13686,28925,30169,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	54330901	54383194	chr2:54330901-54383194	1	+	54330975	54381973	789624	5	100,34,154,140,148,	0,3915,12818,50944,52145,
#Partially deleted in new
chr2	54330933	54361577	chr2:54330933-54361577	0	+	54330975	54343873	789624	4	68,154,116,1375,	0,12786,28025,29269,
#Partially deleted in new
chr2	54330933	54361577	chr2:54330933-54361577	3	+	54330975	54360562	789624	5	68,208,154,116,1375,	0,3883,12786,28025,29269,
#Partially deleted in new
chr2	54330954	54360507	chr2:54330954-54360507	0	+	54330975	54360507	789624	5	47,34,154,116,305,	0,3862,12765,28004,29248,
#Partially deleted in new
chr2	54330964	54361387	chr2:54330964-54361387	1	+	54360349	54360562	789624	3	37,154,1185,	0,12755,29238,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	54330986	54383194	chr2:54330986-54383194	0	+	54330986	54360246	789624	6	15,34,154,69,140,148,	0,3830,12733,29216,50859,52060,
#Partially deleted in new
chr2	54330986	54383742	chr2:54330986-54383742	0	+	54330986	54330986	8553170	5	15,69,99,140,299,	0,29216,29857,50859,52457,
#Partially deleted in new
chr2	54456284	54669675	chr2:54456284-54669675	3	+	54526418	54668569	0	36	234,195,152,174,92,81,116,113,188,118,159,303,154,871,138,757,203,91,147,264,225,90,282,131,205,375,245,139,85,197,113,64,239,174,43,1325,	0,70087,142807,155876,159922,161323,161793,165115,166015,167194,168519,169647,171812,172648,173607,174570,176281,181428,186698,188038,188944,189643,189909,190846,192701,193330,197324,198785,199629,201565,202869,203651,208168,209630,211319,212066,
#Boundary problem: need 38, got 0, diff 38, mapped 0.0
chr2	54456316	54671445	chr2:54456316-54671445	1	+	54526418	54668569	789624	38	202,195,152,174,92,81,116,113,188,118,159,303,154,871,138,757,203,91,147,268,2,225,90,282,131,199,6,375,245,139,85,197,113,64,239,174,43,3095,	0,70055,142775,155844,159890,161291,161761,165083,165983,167162,168487,169615,171780,172616,173575,174538,176249,181396,186666,188006,188840,188912,189611,189877,190814,192669,193255,193298,197292,198753,199597,201533,202837,203619,208136,209598,211287,212034,
#Partially deleted in new
chr2	54457260	54629204	chr2:54457260-54629204	0	+	54526418	54629204	789624	14	47,195,152,174,92,81,116,113,188,118,159,303,154,272,	0,69111,141831,154900,158946,160347,160817,164139,165039,166218,167543,168671,170836,171672,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	54515743	54528715	chr2:54515743-54528715	0	+	54515743	54515743	8553170	2	598,2344,	0,10628,
#Partially deleted in new
chr2	54516047	54540697	chr2:54516047-54540697	3	-	54516047	54516047	8553170	4	202,136,99,99,	0,4282,18992,24551,
#Deleted in new
chr2	54529342	54529801	chr2:54529342-54529801	7	+	54529342	54529342	16724991	1	459,	0,
#Deleted in new
chr2	54545367	54546677	chr2:54545367-54546677	3	-	54545367	54545367	8553170	2	170,207,	0,1103,
#Partially deleted in new
chr2	54558393	54662308	chr2:54558393-54662308	1	+	54558778	54660086	0	31	494,152,174,92,81,116,113,188,118,159,303,154,871,138,757,203,91,147,264,225,90,282,131,205,375,245,139,85,197,113,2373,	0,40698,53767,57813,59214,59684,63006,63906,65085,66410,67538,69703,70539,71498,72461,74172,79319,84589,85929,86835,87534,87800,88737,90592,91221,95215,96676,97520,99456,100760,101542,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	54652517	54660290	chr2:54652517-54660290	0	+	54652517	54652517	8553170	6	1336,139,85,197,113,355,	0,2552,3396,5332,6636,7418,
#Deleted in new
chr2	54661010	54662792	chr2:54661010-54662792	3	-	54661010	54661010	8553170	2	365,237,	0,1545,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	54661050	54680045	chr2:54661050-54680045	0	-	54661050	54661050	8553170	4	220,168,244,222,	0,3230,3547,18773,
#Deleted in new
chr2	54662900	54669674	chr2:54662900-54669674	0	+	54662900	54662900	8553170	4	1791,174,43,1324,	0,3014,4703,5450,
#Deleted in new
chr2	54723498	54724731	chr2:54723498-54724731	0	+	54723498	54723498	8553170	2	279,183,	0,1050,
#Partially deleted in new
chr2	54723664	54816862	chr2:54723664-54816862	0	+	54723664	54723664	8553170	4	113,122,160,76,	0,884,89567,93122,
#Partially deleted in new
chr2	54724541	54972018	chr2:54724541-54972018	3	+	54725061	54970095	789624	41	717,160,99,69,186,136,202,138,257,213,168,107,119,187,106,94,101,203,112,128,142,153,132,89,177,202,127,79,130,99,174,209,158,115,189,173,163,104,154,101,1948,	0,88690,92245,95852,103024,104800,119505,122944,125420,129101,134992,139241,142224,144639,146958,155005,166512,167912,170373,170731,175099,178502,178829,186412,192217,203771,204083,224340,226108,228052,229441,233248,234562,235678,237981,239444,240029,242458,243586,244126,245529,
#Deleted in new
chr2	54747102	54748404	chr2:54747102-54748404	3	-	54747102	54747102	8553170	2	352,45,	0,1257,
#Deleted in new
chr2	54850288	54850352	chr2:54850288-54850352	3	+	54850288	54850288	8553170	1	64,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	54853850	54882878	chr2:54853850-54882878	0	+	54853850	54853850	8553170	6	5,168,107,2602,106,3332,	0,5683,9932,12915,17649,25696,
#Partially deleted in new
chr2	54948881	54960238	chr2:54948881-54960238	0	+	54948881	54948881	8553170	7	79,130,99,174,209,158,19,	0,1768,3712,5101,8908,10222,11338,
#Partially deleted in new
chr2	54954033	54971318	chr2:54954033-54971318	0	+	54954033	54954033	8553170	12	123,209,158,115,189,173,163,158,232,154,101,1248,	0,3756,5070,6186,8489,9952,10537,12689,12966,14094,14634,16037,
#Partially deleted in new
chr2	54964027	54968235	chr2:54964027-54968235	0	+	54964027	54964027	8553170	3	131,163,108,	0,543,4100,
#Partially deleted in new
chr2	54967031	54970332	chr2:54967031-54970332	0	+	54967031	54967031	8553170	4	72,154,101,262,	0,1096,1636,3039,
#Deleted in new
chr2	54970654	54972025	chr2:54970654-54972025	0	+	54970654	54970654	8553170	2	219,288,	0,1083,
#Partially deleted in new
chr2	54972186	55010449	chr2:54972186-55010449	1	-	54973155	55010120	0	7	1012,59,47,70,139,208,363,	0,1376,1634,2508,10328,15304,37900,
#Partially deleted in new
chr2	54972188	55050544	chr2:54972188-55050544	1	-	54973155	55050300	0	7	1010,59,47,70,139,208,800,	0,1374,1632,2506,10326,15302,77556,
#Partially deleted in new
chr2	54972188	55050544	chr2:54972188-55050544	1	-	54973155	55050300	0	9	1010,59,47,70,139,208,2400,57,800,	0,1374,1632,2506,10326,15302,52897,55975,77556,
#Partially deleted in new
chr2	54972188	55049198	chr2:54972188-55049198	1	-	54973155	55027480	0	9	1010,59,47,70,139,208,2400,57,120,	0,1374,1632,2506,10326,15302,52897,55975,76890,
#Partially deleted in new
chr2	54972188	55050544	chr2:54972188-55050544	1	-	54973155	55050300	0	8	1010,59,47,70,139,208,57,800,	0,1374,1632,2506,10326,15302,55975,77556,
#Partially deleted in new
chr2	54972188	55050598	chr2:54972188-55050598	1	-	54973155	55027480	0	9	1010,59,47,70,139,208,2400,57,171,	0,1374,1632,2506,10326,15302,52897,55975,78239,
#Partially deleted in new
chr2	54972188	55050828	chr2:54972188-55050828	1	-	54973155	55027480	0	9	1010,59,47,70,139,208,2400,57,112,	0,1374,1632,2506,10326,15302,52897,55975,78528,
#Partially deleted in new
chr2	54972188	55046886	chr2:54972188-55046886	1	-	54973155	55027480	0	9	1010,59,47,70,139,208,2400,57,71,	0,1374,1632,2506,10326,15302,52897,55975,74627,
#Partially deleted in new
chr2	54972584	54987633	chr2:54972584-54987633	0	-	54973155	54987633	789624	4	614,59,139,143,	0,978,9930,14906,
#Deleted in new
chr2	54972795	54974019	chr2:54972795-54974019	0	-	54972795	54972795	8553170	2	403,457,	0,767,
#Deleted in new
chr2	54972796	54974191	chr2:54972796-54974191	0	-	54972796	54972796	8553170	3	402,59,371,	0,766,1024,
#Partially deleted in new
chr2	54972813	55050376	chr2:54972813-55050376	3	-	54973155	55050300	789624	8	385,59,47,70,139,208,470,78,	0,749,1007,1881,9701,14677,76931,77485,
#Partially deleted in new
chr2	54973512	55049640	chr2:54973512-55049640	0	-	54973558	55049640	789624	6	109,47,70,139,208,83,	0,308,1182,9002,13978,76045,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	55014417	55014521	chr2:55014417-55014521	3	-	55014417	55014417	8553170	1	104,	0,
#Partially deleted in new
chr2	55027206	55112621	chr2:55027206-55112621	0	-	55027206	55027480	789624	4	279,57,151,102,	0,957,53282,85313,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	55056482	55112567	chr2:55056482-55112567	0	-	55056482	55056482	8553170	4	75,148,151,48,	0,4123,24006,56037,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	55174790	55232274	chr2:55174790-55232274	0	-	55181642	55222411	789624	6	1196,180,203,175,259,39,	0,2811,5719,6779,47444,57445,
#Partially deleted in new
chr2	55175638	55232303	chr2:55175638-55232303	0	-	55175638	55175638	8553170	3	348,180,68,	0,1963,56597,
#Partially deleted in new
chr2	55175648	55232313	chr2:55175648-55232313	1	-	55175789	55222411	789624	13	338,180,203,175,107,85,113,202,134,188,259,173,91,	0,1953,4861,5921,30621,32977,33755,33981,37024,42162,46586,52383,56574,
#Partially deleted in new
chr2	55175648	55232158	chr2:55175648-55232158	1	-	55175789	55222411	789624	12	338,180,203,175,107,85,113,202,134,188,259,155,	0,1953,4861,5921,30621,32977,33755,33981,37024,42162,46586,56355,
#Partially deleted in new
chr2	55175668	55232563	chr2:55175668-55232563	3	-	55175789	55212805	789624	11	318,180,203,175,107,85,113,202,134,188,72,	0,1933,4841,5901,30601,32957,33735,33961,37004,42142,56823,
#Partially deleted in new
chr2	55175860	55209652	chr2:55175860-55209652	0	-	55206362	55209652	789624	5	126,180,107,113,23,	0,1741,30409,33543,33769,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	55177743	55232345	chr2:55177743-55232345	0	-	55177743	55177743	8553170	5	38,203,107,123,123,	0,2766,28526,29074,54479,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	55214386	55216126	chr2:55214386-55216126	3	-	55214386	55214386	8553170	2	764,152,	0,1588,
#Partially deleted in new
chr2	55217933	55232354	chr2:55217933-55232354	0	-	55217933	55222411	789624	4	65,259,173,119,	0,4301,10098,14302,
#Partially deleted in new
chr2	55218119	55232263	chr2:55218119-55232263	0	-	55218119	55218119	8553170	2	481,28,	0,14116,
#Partially deleted in new
chr2	55218344	55232292	chr2:55218344-55232292	0	-	55218344	55218344	8553170	3	256,259,57,	0,3890,13891,
#Partially deleted in new
chr2	55222271	55224398	chr2:55222271-55224398	0	-	55222271	55222411	789624	2	222,208,	0,1919,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	55222359	55224360	chr2:55222359-55224360	0	-	55222359	55222411	789624	2	134,365,	0,1636,
#Deleted in new
chr2	55224279	55225908	chr2:55224279-55225908	7	+	55224279	55224279	16724991	2	231,1203,	0,426,
#Partially deleted in new
chr2	55231902	55235588	chr2:55231902-55235588	3	+	55232824	55235577	0	6	206,65,55,86,132,161,	0,905,1460,2216,2928,3525,
#Partially deleted in new
chr2	55232401	55235853	chr2:55232401-55235853	1	+	55232824	55235577	0	6	307,65,55,86,132,426,	0,406,961,1717,2429,3026,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	55232404	55234301	chr2:55232404-55234301	1	+	55232824	55234301	789624	5	304,65,55,122,60,	0,403,958,1714,1837,
#Partially deleted in new
chr2	55232431	55234959	chr2:55232431-55234959	0	+	55232824	55234959	789624	5	87,65,55,86,129,	0,376,931,1687,2399,
#Partially deleted in new
chr2	55232677	55235755	chr2:55232677-55235755	1	+	55232824	55235577	0	5	195,55,86,132,328,	0,685,1441,2153,2750,
#Deleted in new
chr2	55232680	55233369	chr2:55232680-55233369	0	+	55232680	55232680	8553170	2	28,562,	0,127,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	55232687	55233833	chr2:55232687-55233833	0	+	55232687	55232687	8553170	3	21,65,471,	0,120,675,
#Partially deleted in new
chr2	55232688	55235184	chr2:55232688-55235184	0	+	55232688	55232688	8553170	5	20,65,55,86,354,	0,119,674,1430,2142,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	55232693	55233718	chr2:55232693-55233718	0	+	55232693	55232693	8553170	2	179,356,	0,669,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	55232794	55235609	chr2:55232794-55235609	0	+	55232794	55232794	8553170	4	78,55,844,182,	0,568,1324,2633,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	55233356	55234923	chr2:55233356-55234923	0	+	55233356	55233356	8553170	3	61,443,93,	0,762,1474,
#Partially deleted in new
chr2	55236594	55269243	chr2:55236594-55269243	3	-	55236647	55263858	789624	15	226,141,165,141,253,205,125,140,177,161,172,112,226,67,75,	0,693,3416,6345,6821,7434,9742,12800,15882,17446,18059,25721,27045,30974,32574,
#Partially deleted in new
chr2	55236619	55269248	chr2:55236619-55269248	1	-	55236647	55263858	789624	16	201,141,165,141,253,205,125,140,177,161,172,112,226,67,162,80,	0,668,3391,6320,6796,7409,9717,12775,15857,17421,18034,25696,27020,30949,31958,32549,
#Partially deleted in new
chr2	55236620	55263868	chr2:55236620-55263868	1	-	55236647	55263858	789624	13	200,141,165,141,253,205,125,140,177,161,172,112,229,	0,667,3390,6319,6795,7408,9716,12774,15856,17420,18033,25695,27019,
#Partially deleted in new
chr2	55240010	55249534	chr2:55240010-55249534	0	-	55240010	55249534	789624	6	165,141,253,79,125,140,	0,2929,3405,4144,6326,9384,
#Partially deleted in new
chr2	55252541	55267604	chr2:55252541-55267604	0	-	55252541	55252541	8553170	5	112,172,112,226,36,	0,2112,9774,11098,15027,
#Partially deleted in new
chr2	55254766	55269217	chr2:55254766-55269217	0	-	55254766	55254766	8553170	5	59,112,226,67,401,	0,7549,8873,12802,14050,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	55263640	55269179	chr2:55263640-55269179	0	-	55263640	55263858	789624	5	225,138,67,162,363,	0,2740,3928,4937,5176,
#Partially deleted in new
chr2	55263646	55269347	chr2:55263646-55269347	0	-	55263646	55263858	789624	4	219,67,162,135,	0,3922,4931,5566,
#Partially deleted in new
chr2	55263647	55267787	chr2:55263647-55267787	0	-	55263647	55263858	789624	2	218,219,	0,3921,
#Partially deleted in new
chr2	55263779	55269193	chr2:55263779-55269193	0	-	55263779	55263858	789624	4	86,67,162,202,	0,3789,4798,5212,
#Partially deleted in new
chr2	55263827	55269038	chr2:55263827-55269038	0	-	55263827	55263858	789624	3	38,67,461,	0,3741,4750,
#Partially deleted in new
chr2	55263836	55269138	chr2:55263836-55269138	0	-	55263836	55263858	789624	4	29,67,162,322,	0,3732,4741,4980,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	55282318	55284472	chr2:55282318-55284472	5	+	55282318	55282318	16724991	1	2154,	0,
#Partially deleted in new
chr2	55282328	55284437	chr2:55282328-55284437	5	+	55282328	55282328	16724991	2	106,435,	0,1674,
#Partially deleted in new
chr2	55282328	55284522	chr2:55282328-55284522	7	+	55282328	55282328	16724991	2	106,520,	0,1674,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	55282349	55314446	chr2:55282349-55314446	0	+	55282349	55282349	8553170	3	85,96,459,	0,26482,31638,
#Partially deleted in new
chr2	55287841	55419888	chr2:55287841-55419888	3	-	55291710	55419079	789624	32	3323,100,460,266,81,72,201,215,93,146,187,144,278,162,165,142,128,1071,138,185,145,147,159,82,173,141,84,59,70,109,101,872,	0,3834,7755,8416,11997,13364,14030,20967,21320,24592,28086,29364,29722,31001,34686,40452,44724,46252,48839,51622,55806,56526,58333,61676,67737,74466,76108,84610,86972,100936,130974,131175,
#Partially deleted in new
chr2	55287841	55419613	chr2:55287841-55419613	1	-	55291710	55419079	789624	33	3323,100,460,266,81,72,201,84,215,93,146,187,144,278,162,165,139,128,1071,138,185,145,147,159,82,173,141,84,59,70,109,101,597,	0,3834,7755,8416,11997,13364,14030,15227,20967,21320,24592,28086,29364,29722,31001,34686,40452,44724,46252,48839,51622,55806,56526,58333,61676,67737,74466,76108,84610,86972,100936,130974,131175,
#Partially deleted in new
chr2	55287847	55419878	chr2:55287847-55419878	1	-	55291710	55419079	789624	34	3317,100,131,107,266,81,72,201,84,215,93,146,187,144,278,162,165,142,128,1071,138,185,145,147,159,82,173,141,84,59,70,109,101,862,	0,3828,7749,8102,8410,11991,13358,14024,15221,20961,21314,24586,28080,29358,29716,30995,34680,40446,44718,46246,48833,51616,55800,56520,58327,61670,67731,74460,76102,84604,86966,100930,130968,131169,
#Partially deleted in new
chr2	55287847	55419888	chr2:55287847-55419888	1	-	55291710	55419079	789624	33	3317,100,460,266,81,72,201,84,215,93,146,187,144,278,162,165,142,128,1071,138,185,145,147,159,82,173,141,84,59,70,109,101,872,	0,3828,7749,8410,11991,13358,14024,15221,20961,21314,24586,28080,29358,29716,30995,34680,40446,44718,46246,48833,51616,55800,56520,58327,61670,67731,74460,76102,84604,86966,100930,130968,131169,
#Partially deleted in new
chr2	55287847	55419878	chr2:55287847-55419878	1	-	55291710	55419079	789624	33	508,100,460,266,81,72,201,84,215,93,146,187,144,278,162,165,142,128,1071,138,185,145,147,159,82,173,141,84,59,70,109,101,862,	0,3828,7749,8410,11991,13358,14024,15221,20961,21314,24586,28080,29358,29716,30995,34680,40446,44718,46246,48833,51616,55800,56520,58327,61670,67731,74460,76102,84604,86966,100930,130968,131169,
#Partially deleted in new
chr2	55287847	55419079	chr2:55287847-55419079	1	-	55291710	55419079	789624	32	3317,100,460,266,81,72,201,215,93,146,187,144,278,162,165,139,128,1071,138,185,145,147,159,82,173,141,84,59,70,109,101,63,	0,3828,7749,8410,11991,13358,14024,20961,21314,24586,28080,29358,29716,30995,34680,40446,44718,46246,48833,51616,55800,56520,58327,61670,67731,74460,76102,84604,86966,100930,130968,131169,
#Partially deleted in new
chr2	55287848	55334301	chr2:55287848-55334301	0	-	55291710	55334301	789624	19	3316,100,131,107,266,81,72,201,215,93,146,187,144,278,162,165,142,128,208,	0,3827,7748,8101,8409,11990,13357,14023,20960,21313,24585,28079,29357,29715,30994,34679,40445,44717,46245,
#Partially deleted in new
chr2	55287848	55334327	chr2:55287848-55334327	0	-	55291710	55334327	789624	19	3316,100,131,107,266,72,201,84,215,93,146,187,144,278,162,165,142,128,234,	0,3827,7748,8101,8409,13357,14023,15220,20960,21313,24585,28079,29357,29715,30994,34679,40445,44717,46245,
#Partially deleted in new
chr2	55287848	55296455	chr2:55287848-55296455	0	-	55291710	55296455	789624	5	507,100,131,107,198,	0,3827,7748,8101,8409,
#Partially deleted in new
chr2	55287871	55419583	chr2:55287871-55419583	1	-	55291710	55419079	789624	25	3293,100,460,266,72,201,215,93,146,187,144,278,162,165,142,128,1071,138,185,145,147,159,82,101,567,	0,3804,7725,8386,13334,14000,20937,21290,24562,28056,29334,29692,30971,34656,40422,44694,46222,48809,51592,55776,56496,58303,61646,130944,131145,
#Partially deleted in new
chr2	55288083	55328425	chr2:55288083-55328425	0	-	55291710	55328425	789624	16	272,100,460,266,81,72,201,215,93,146,187,144,278,162,165,132,	0,3592,7513,8174,11755,13122,13788,20725,21078,24350,27844,29122,29480,30759,34444,40210,
#Partially deleted in new
chr2	55288087	55309207	chr2:55288087-55309207	0	-	55291710	55309207	789624	7	3077,100,460,266,72,215,46,	0,3588,7509,8170,13118,20721,21074,
#Partially deleted in new
chr2	55288096	55343688	chr2:55288096-55343688	0	-	55336813	55343688	789624	22	3068,100,131,107,263,81,72,201,84,215,93,146,187,144,278,162,165,142,128,1071,138,41,	0,3579,7500,7853,8161,11742,13109,13775,14972,20712,21065,24337,27831,29109,29467,30746,34431,40197,44469,45997,48584,55551,
#Partially deleted in new
chr2	55288112	55334691	chr2:55288112-55334691	0	-	55291710	55334691	789624	18	3052,100,460,266,72,201,84,215,93,146,187,144,278,162,165,142,128,598,	0,3563,7484,8145,13093,13759,14956,20696,21049,24321,27815,29093,29451,30730,34415,40181,44453,45981,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	55288117	55292914	chr2:55288117-55292914	0	-	55288117	55288117	8553170	2	3047,1239,	0,3558,
#Partially deleted in new
chr2	55288125	55334675	chr2:55288125-55334675	0	-	55291710	55334675	789624	18	3039,100,460,266,81,72,201,84,215,93,146,187,278,162,165,142,128,582,	0,3550,7471,8132,11713,13080,13746,14943,20683,21036,24308,27802,29438,30717,34402,40168,44440,45968,
#Partially deleted in new
chr2	55288200	55364019	chr2:55288200-55364019	0	-	55316096	55364019	789624	25	2964,100,460,263,81,72,201,215,93,146,187,162,165,139,128,1071,138,185,145,147,159,82,173,141,70,	0,3475,7396,8057,11638,13005,13671,20608,20961,24233,27727,30642,34327,40093,44365,45893,48480,51263,55447,56167,57974,61317,67378,74107,75749,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	55288207	55297165	chr2:55288207-55297165	0	-	55288207	55288207	8553170	4	2957,100,460,908,	0,3468,7389,8050,
#Partially deleted in new
chr2	55289672	55312574	chr2:55289672-55312574	0	-	55299827	55312574	789624	11	1492,100,460,266,92,72,201,84,215,93,141,	0,2003,5924,6585,10155,11533,12199,13396,19136,19489,22761,
#Partially deleted in new
chr2	55290180	55419773	chr2:55290180-55419773	0	-	55303103	55419079	789624	32	984,100,460,266,81,72,201,84,93,146,187,144,278,162,165,142,128,1071,138,185,145,147,159,82,173,141,84,59,70,109,101,757,	0,1495,5416,6077,9658,11025,11691,12888,18981,22253,25747,27025,27383,28662,32347,38113,42385,43913,46500,49283,53467,54187,55994,59337,65398,72127,73769,82271,84633,98597,128635,128836,
#Partially deleted in new
chr2	55290409	55419276	chr2:55290409-55419276	1	-	55291710	55419079	789624	34	755,100,131,107,266,81,72,201,84,215,93,146,187,144,278,162,165,139,128,1071,138,185,145,147,159,82,173,141,84,59,70,109,101,260,	0,1266,5187,5540,5848,9429,10796,11462,12659,18399,18752,22024,25518,26796,27154,28433,32118,37884,42156,43684,46271,49054,53238,53958,55765,59108,65169,71898,73540,82042,84404,98368,128406,128607,
#Partially deleted in new
chr2	55290508	55328487	chr2:55290508-55328487	0	-	55290508	55290508	8553170	16	656,100,460,266,81,72,201,84,215,93,146,187,278,162,165,194,	0,1167,5088,5749,9330,10697,11363,12560,18300,18653,21925,25419,27055,28334,32019,37785,
#Partially deleted in new
chr2	55290654	55296684	chr2:55290654-55296684	0	-	55290654	55290654	8553170	3	1121,460,427,	0,4942,5603,
#Partially deleted in new
chr2	55290654	55318904	chr2:55290654-55318904	0	-	55291710	55318904	789624	13	510,100,460,266,81,72,201,215,93,146,187,278,62,	0,1021,4942,5603,9184,10551,11217,18154,18507,21779,25273,26909,28188,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	55290809	55315952	chr2:55290809-55315952	0	-	55290809	55290809	8553170	12	355,100,131,107,266,1439,201,84,215,93,146,25,	0,866,4787,5140,5448,9029,11062,12259,17999,18352,21624,25118,
#Partially deleted in new
chr2	55290838	55301843	chr2:55290838-55301843	0	-	55290838	55290838	8553170	5	326,100,460,266,887,	0,837,4758,5419,10118,
#Partially deleted in new
chr2	55290899	55334544	chr2:55290899-55334544	0	-	55291710	55334544	789624	18	876,460,266,81,72,201,84,215,93,146,187,144,278,162,165,142,128,451,	0,4697,5358,8939,10306,10972,12169,17909,18262,21534,25028,26306,26664,27943,31628,37394,41666,43194,
#Partially deleted in new
chr2	55291699	55301272	chr2:55291699-55301272	0	-	55299897	55301272	789624	6	76,460,266,81,40,67,	0,3897,4558,8139,9257,9506,
#Partially deleted in new
chr2	55293552	55334345	chr2:55293552-55334345	0	-	55295063	55334345	789624	17	2504,266,81,72,201,84,215,93,146,187,144,278,162,165,142,128,252,	0,2705,6286,7653,8319,9516,15256,15609,18881,22375,23653,24011,25290,28975,34741,39013,40541,
#Partially deleted in new
chr2	55295606	55301211	chr2:55295606-55301211	0	-	55295606	55301211	789624	5	450,263,81,87,6,	0,651,4232,4646,5599,
#Partially deleted in new
chr2	55295796	55328396	chr2:55295796-55328396	0	-	55295796	55328396	789624	13	260,266,81,72,201,215,93,146,187,144,278,162,103,	0,461,4042,5409,6075,13012,13365,16637,20131,21409,21767,23046,32497,
#Partially deleted in new
chr2	55301667	55419702	chr2:55301667-55419702	0	-	55301667	55301667	8553170	27	405,84,215,93,146,187,144,278,162,165,142,128,1071,138,185,145,147,159,82,173,141,84,59,70,109,101,686,	0,1401,7141,7494,10766,14260,15538,15896,17175,20860,26626,30898,32426,35013,37796,41980,42700,44507,47850,53911,60640,62282,70784,73146,87110,117148,117349,
#Partially deleted in new
chr2	55302662	55419795	chr2:55302662-55419795	1	-	55303054	55419079	789624	26	490,215,93,146,187,144,278,162,165,142,128,1071,138,185,145,147,159,82,173,141,84,59,70,109,101,779,	0,6146,6499,9771,13265,14543,14901,16180,19865,25631,29903,31431,34018,36801,40985,41705,43512,46855,52916,59645,61287,69789,72151,86115,116153,116354,
#Partially deleted in new
chr2	55302729	55419895	chr2:55302729-55419895	1	-	55303054	55419079	789624	26	423,215,93,146,187,144,278,162,165,139,128,1071,138,185,145,147,159,82,173,141,84,59,70,109,101,879,	0,6079,6432,9704,13198,14476,14834,16113,19798,25564,29836,31364,33951,36734,40918,41638,43445,46788,52849,59578,61220,69722,72084,86048,116086,116287,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	55306096	55314446	chr2:55306096-55314446	0	+	55306096	55306096	8553170	3	132,96,459,	0,2735,7891,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	55307976	55324334	chr2:55307976-55324334	0	-	55307976	55307976	8553170	8	1047,93,146,187,144,278,162,1807,	0,1185,4457,7951,9229,9587,10866,14551,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	55308101	55314130	chr2:55308101-55314130	0	-	55308101	55308101	8553170	3	922,93,1697,	0,1060,4332,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	55308491	55314661	chr2:55308491-55314661	1	+	55308491	55308491	8553170	2	436,674,	0,5496,
#Partially deleted in new
chr2	55309181	55317380	chr2:55309181-55317380	0	-	55309181	55309181	8553170	4	73,146,187,175,	0,3252,6746,8024,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	55313828	55316051	chr2:55313828-55316051	0	-	55314081	55316051	789624	2	295,124,	0,2099,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	55314081	55340310	chr2:55314081-55340310	1	+	55314081	55314081	8553170	2	170,808,	0,25421,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	55314159	55339798	chr2:55314159-55339798	0	+	55314159	55314159	8553170	4	92,98,294,296,	0,15262,24816,25343,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	55314160	55340227	chr2:55314160-55340227	0	+	55314160	55314160	8553170	4	91,292,123,725,	0,15261,17978,25342,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	55314161	55346049	chr2:55314161-55346049	0	+	55314161	55314161	8553170	2	90,693,	0,31195,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	55314161	55339941	chr2:55314161-55339941	0	+	55314161	55314161	8553170	3	90,292,439,	0,15260,25341,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	55314161	55340168	chr2:55314161-55340168	2	+	55314161	55314161	8553170	3	90,98,666,	0,15260,25341,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	55314161	55315525	chr2:55314161-55315525	0	+	55314161	55314161	8553170	2	90,501,	0,863,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	55314161	55339563	chr2:55314161-55339563	0	+	55314161	55314161	8553170	4	90,292,294,61,	0,15260,24814,25341,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	55314189	55339789	chr2:55314189-55339789	0	+	55314189	55314189	8553170	3	62,294,287,	0,24786,25313,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	55314189	55340308	chr2:55314189-55340308	0	+	55314189	55314189	8553170	3	62,100,806,	0,6639,25313,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	55314189	55340227	chr2:55314189-55340227	0	+	55314189	55314189	8553170	3	62,123,725,	0,17949,25313,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	55314189	55321131	chr2:55314189-55321131	0	+	55314189	55314189	8553170	2	62,303,	0,6639,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	55314189	55339685	chr2:55314189-55339685	0	+	55314189	55314189	8553170	4	62,100,294,183,	0,6639,24786,25313,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	55314189	55339525	chr2:55314189-55339525	0	+	55314189	55314189	8553170	3	62,65,23,	0,3555,25313,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	55314189	55345828	chr2:55314189-55345828	0	+	55314189	55314189	8553170	3	62,124,472,	0,25661,31167,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	55314189	55345887	chr2:55314189-55345887	0	+	55314189	55314189	8553170	3	62,98,531,	0,15232,31167,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	55314189	55339270	chr2:55314189-55339270	0	+	55314189	55314189	8553170	4	62,100,123,295,	0,6639,17949,24786,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	55314192	55315455	chr2:55314192-55315455	0	+	55314192	55314192	8553170	2	59,193,	0,1070,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	55314193	55317212	chr2:55314193-55317212	0	+	55314193	55314193	8553170	3	58,126,334,	0,232,2685,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	55316102	55330168	chr2:55316102-55330168	0	-	55316102	55316102	8553170	6	12,144,278,162,165,1875,	0,1103,1461,2740,6425,12191,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	55331821	55334151	chr2:55331821-55334151	0	-	55331821	55331821	8553170	3	606,128,58,	0,744,2272,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	55332130	55344472	chr2:55332130-55344472	0	-	55332130	55332130	8553170	7	302,128,1071,138,185,145,105,	0,435,1963,4550,7333,11517,12237,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	55332130	55419385	chr2:55332130-55419385	0	-	55332130	55332130	8553170	16	563,1071,138,185,145,147,159,82,173,141,84,59,70,109,101,369,	0,1963,4550,7333,11517,12237,14044,17387,23448,30177,31819,40321,42683,56647,86685,86886,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	55332298	55356802	chr2:55332298-55356802	0	-	55332298	55332298	8553170	9	395,1071,138,185,145,147,159,82,1224,	0,1795,4382,7165,11349,12069,13876,17219,23280,
#Partially deleted in new
chr2	55334263	55419613	chr2:55334263-55419613	1	-	55334367	55388825	789624	16	113,786,138,185,145,147,159,82,173,141,84,59,70,109,101,597,	0,115,2417,5200,9384,10104,11911,15254,21315,28044,29686,38188,40550,54514,84552,84753,
#Partially deleted in new
chr2	55334335	55419836	chr2:55334335-55419836	0	-	55334335	55419079	789624	16	829,138,185,145,147,159,82,173,141,84,59,70,109,101,457,92,	0,2345,5128,9312,10032,11839,15182,21243,27972,29614,38116,40478,54442,84480,84681,85409,
#Partially deleted in new
chr2	55334843	55419363	chr2:55334843-55419363	0	-	55346326	55419079	789624	14	321,138,185,145,147,159,173,141,84,59,70,109,101,347,	0,1837,4620,8804,9524,11331,20735,27464,29106,37608,39970,53934,83972,84173,
#Partially deleted in new
chr2	55334989	55349719	chr2:55334989-55349719	0	-	55334989	55334989	8553170	7	175,138,185,145,147,159,202,	0,1691,4474,8658,9378,11185,14528,
#Partially deleted in new
chr2	55335008	55419315	chr2:55335008-55419315	0	-	55349584	55419079	789624	14	156,138,185,145,147,159,82,141,84,59,70,109,101,299,	0,1672,4455,8639,9359,11166,14509,27299,28941,37443,39805,53769,83807,84008,
#Partially deleted in new
chr2	55335013	55337681	chr2:55335013-55337681	0	-	55335013	55335013	8553170	2	151,1001,	0,1667,
#Partially deleted in new
chr2	55335015	55419815	chr2:55335015-55419815	0	-	55335015	55419079	789624	13	149,138,185,145,147,159,82,173,59,70,109,101,799,	0,1665,4448,8632,9352,11159,14502,20563,37436,39798,53762,83800,84001,
#Partially deleted in new
chr2	55335017	55419499	chr2:55335017-55419499	0	-	55346326	55419079	789624	13	147,138,145,147,159,173,141,84,59,70,109,101,483,	0,1663,8630,9350,11157,20561,27290,28932,37434,39796,53760,83798,83999,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	55335048	55394645	chr2:55335048-55394645	0	-	55335048	55335048	8553170	14	116,138,185,145,147,159,82,173,141,84,59,70,109,489,	0,1632,4415,8599,9319,11126,14469,20530,27259,28901,37403,39765,53729,59108,
#Partially deleted in new
chr2	55335078	55419730	chr2:55335078-55419730	0	-	55335078	55419079	789624	13	86,138,185,145,147,159,141,84,59,70,109,101,714,	0,1602,4385,8569,9289,11096,27229,28871,37373,39735,53699,83737,83938,
#Partially deleted in new
chr2	55335078	55419732	chr2:55335078-55419732	0	-	55346283	55419079	789624	10	86,138,185,145,147,159,70,109,101,716,	0,1602,4385,8569,9289,11096,39735,53699,83737,83938,
#Partially deleted in new
chr2	55335092	55419540	chr2:55335092-55419540	0	-	55349540	55419079	789624	11	72,138,185,145,147,159,82,70,109,101,524,	0,1588,4371,8555,9275,11082,14425,39721,53685,83723,83924,
#Partially deleted in new
chr2	55336715	55364238	chr2:55336715-55364238	0	-	55336715	55336715	8553170	9	103,185,145,147,159,82,173,141,289,	0,2748,6932,7652,9459,12802,18863,25592,27234,
#Partially deleted in new
chr2	55343778	55388844	chr2:55343778-55388844	0	-	55363730	55388844	789624	11	14,147,159,82,173,141,122,84,59,70,67,	0,589,2396,5739,11800,18529,19833,20171,28673,31035,44999,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	55343989	55350610	chr2:55343989-55350610	0	-	55343989	55343989	8553170	3	525,159,1093,	0,2185,5528,
#Partially deleted in new
chr2	55344463	55419565	chr2:55344463-55419565	0	-	55344463	55419079	789624	10	51,159,82,173,84,59,70,109,101,549,	0,1711,5054,11115,19486,27988,30350,44314,74352,74553,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	55348440	55356203	chr2:55348440-55356203	0	-	55348440	55348440	8553170	2	1159,625,	0,7138,
#Partially deleted in new
chr2	55355322	55362354	chr2:55355322-55362354	0	-	55355322	55355322	8553170	2	429,47,	0,6985,
#Partially deleted in new
chr2	55355711	55399777	chr2:55355711-55399777	0	-	55355711	55355711	8553170	7	40,141,84,59,70,109,79,	0,6596,8238,16740,19102,33066,43987,
#Partially deleted in new
chr2	55361912	55419643	chr2:55361912-55419643	0	-	55361912	55361912	8553170	7	536,84,59,70,109,101,627,	0,2037,10539,12901,26865,56903,57104,
#Partially deleted in new
chr2	55388535	55419834	chr2:55388535-55419834	0	-	55388535	55388535	8553170	3	351,101,818,	0,30280,30481,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	55403386	55419850	chr2:55403386-55419850	1	-	55406013	55419079	789624	3	2772,101,834,	0,15429,15630,
#Deleted in new
chr2	55416922	55418951	chr2:55416922-55418951	0	-	55416922	55416922	8553170	1	2029,	0,
#Deleted in new
chr2	55418291	55419661	chr2:55418291-55419661	0	-	55418291	55418291	8553170	2	625,645,	0,725,
#Partially deleted in new
chr2	55435155	55435622	chr2:55435155-55435622	7	-	55435155	55435155	16724991	1	467,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	55451003	55451099	chr2:55451003-55451099	3	-	55451003	55451003	8553170	1	96,	0,
#Deleted in new
chr2	55456105	55456204	chr2:55456105-55456204	3	-	55456105	55456105	8553170	1	99,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	55499949	55500055	chr2:55499949-55500055	3	+	55499949	55499949	8553170	1	106,	0,
#Partially deleted in new
chr2	55519603	55545079	chr2:55519603-55545079	1	+	55519801	55545008	789624	11	313,75,65,102,115,88,52,103,137,150,173,	0,801,2498,4117,9274,14269,16108,17879,24334,24616,25303,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	55519645	55539543	chr2:55519645-55539543	1	+	55519801	55538781	789624	8	271,65,102,115,88,52,103,779,	0,2456,4075,9232,14227,16066,17837,19119,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	55519653	55545879	chr2:55519653-55545879	3	+	55519801	55545008	789624	10	263,65,102,115,88,52,103,137,150,973,	0,2448,4067,9224,14219,16058,17829,24284,24566,25253,
#Partially deleted in new
chr2	55519689	55545079	chr2:55519689-55545079	1	+	55519801	55545008	789624	10	227,65,102,115,88,52,103,50,150,173,	0,2412,4031,9188,14183,16022,17793,24335,24530,25217,
#Partially deleted in new
chr2	55519730	55535914	chr2:55519730-55535914	1	+	55519801	55535898	789624	6	186,65,102,115,88,203,	0,2371,3990,9147,14142,15981,
#Partially deleted in new
chr2	55531010	55544294	chr2:55531010-55544294	0	+	55531010	55531010	8553170	6	257,88,52,103,137,75,	0,2862,4701,6472,12927,13209,
#Deleted in new
chr2	55544019	55545075	chr2:55544019-55545075	0	+	55544019	55544019	8553170	2	350,169,	0,887,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	55547291	55617614	chr2:55547291-55617614	1	-	55549910	55617285	789624	15	2715,194,185,140,170,42,103,132,117,117,78,624,99,56,471,	0,11483,17021,17610,20902,30023,32387,34275,37759,39326,41587,51124,56686,68159,69852,
#Partially deleted in new
chr2	55548377	55617608	chr2:55548377-55617608	3	-	55549910	55617285	789624	16	1629,194,185,140,170,159,42,103,132,117,117,78,624,99,56,465,	0,10397,15935,16524,19816,25241,28937,31301,33189,36673,38240,40501,50038,55600,67073,68766,
#Partially deleted in new
chr2	55548378	55617588	chr2:55548378-55617588	1	-	55549910	55617285	789624	17	1628,194,185,140,170,159,42,96,103,132,117,117,78,624,99,56,445,	0,10396,15934,16523,19815,25240,28936,29868,31300,33188,36672,38239,40500,50037,55599,67072,68765,
#Deleted in new
chr2	55565702	55565850	chr2:55565702-55565850	3	+	55565702	55565702	8553170	1	148,	0,
#Partially deleted in new
chr2	55568028	55573718	chr2:55568028-55573718	0	-	55568028	55568028	8553170	2	335,100,	0,5590,
#Partially deleted in new
chr2	55598697	55616617	chr2:55598697-55616617	0	-	55598697	55598697	8553170	4	342,99,56,100,	0,5280,16753,17820,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	55614175	55618880	chr2:55614175-55618880	0	-	55614175	55614175	8553170	3	1331,835,815,	0,2968,3890,
#Partially deleted in new
chr2	55617908	55618373	chr2:55617908-55618373	3	+	55617908	55617908	8553170	1	465,	0,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr2	55634264	55693910	chr2:55634264-55693910	3	-	55636236	55693823	0	28	2128,48,79,56,107,84,84,64,72,107,54,90,67,37,71,103,97,58,52,187,114,48,64,50,106,75,61,248,	0,3287,6362,8893,9054,10372,11084,11994,12150,13082,20635,21866,22040,25892,27691,32726,33597,37054,37730,38628,45417,46447,46590,49520,50678,52105,53380,59398,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr2	55634568	55693823	chr2:55634568-55693823	0	-	55636236	55693823	0	29	281,831,48,79,56,107,84,84,64,72,107,54,90,67,37,71,103,97,58,52,187,114,48,64,50,106,75,61,161,	0,993,2983,6058,8589,8750,10068,10780,11690,11846,12778,20331,21562,21736,25588,27387,32422,33293,36750,37426,38324,45113,46143,46286,49216,50374,51801,53076,59094,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr2	55635093	55693842	chr2:55635093-55693842	0	-	55680831	55693823	789624	27	1299,48,79,56,94,84,84,64,72,107,54,90,67,37,71,103,97,58,52,187,114,207,50,106,75,61,180,	0,2458,5533,8064,8225,9543,10255,11165,11321,12253,19806,21037,21211,25063,26862,31897,32768,36225,36901,37799,44588,45618,48691,49849,51276,52551,58569,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	55636369	55647382	chr2:55636369-55647382	0	-	55636369	55636369	8553170	9	23,48,79,56,107,796,64,72,36,	0,1182,4257,6788,6949,8267,9889,10045,10977,
#Partially deleted in new
chr2	55647400	55671368	chr2:55647400-55671368	0	-	55656160	55671368	789624	8	53,54,90,37,71,103,97,50,	0,7499,8730,12756,14555,19590,20461,23918,
#Partially deleted in new
chr2	55679681	55693863	chr2:55679681-55693863	0	-	55684993	55693823	789624	6	114,48,64,50,106,201,	0,1030,1173,4103,5261,13981,
#Partially deleted in new
chr2	55684993	55693823	chr2:55684993-55693823	1	-	55684993	55693823	789624	2	55,161,	0,8669,
#Partially deleted in new
chr2	55865966	55924139	chr2:55865966-55924139	3	-	55867072	55922440	789624	11	1268,196,124,120,120,120,123,387,49,88,429,	0,4753,5033,8979,10656,11779,15645,51698,52252,56393,57744,
#Partially deleted in new
chr2	55866611	55923776	chr2:55866611-55923776	0	-	55918073	55922440	789624	9	623,196,124,120,123,420,49,88,66,	0,4108,4388,8334,15000,51053,51607,55748,57099,
#Partially deleted in new
chr2	55866859	55923787	chr2:55866859-55923787	1	-	55867072	55922440	789624	12	375,196,124,120,120,120,123,387,49,88,41,77,	0,3860,4140,8086,9763,10886,14752,50805,51359,55500,56039,56851,
#Partially deleted in new
chr2	55866906	55917780	chr2:55866906-55917780	0	-	55867072	55917780	789624	6	328,196,124,120,123,116,	0,3813,4093,8039,14705,50758,
#Deleted in new
chr2	55917664	55923781	chr2:55917664-55923781	0	-	55917664	55922440	789624	5	387,49,88,138,71,	0,554,4695,4945,6046,
#Deleted in new
chr2	55917724	55923776	chr2:55917724-55923776	0	-	55917724	55917724	8553170	4	360,49,88,66,	0,494,4635,5986,
#Deleted in new
chr2	55917824	55923795	chr2:55917824-55923795	0	-	55917824	55922440	789624	6	227,49,88,82,41,85,	0,394,4535,4785,5074,5886,
#Deleted in new
chr2	55917863	55923782	chr2:55917863-55923782	0	-	55917863	55922440	789624	6	188,49,88,121,41,72,	0,355,4496,4707,5035,5847,
#Deleted in new
chr2	55917920	55923782	chr2:55917920-55923782	0	-	55917920	55922440	789624	6	131,49,88,177,41,72,	0,298,4439,4650,4978,5790,
#Deleted in new
chr2	55917996	55923785	chr2:55917996-55923785	0	-	55917996	55922440	789624	5	55,49,332,41,75,	0,222,4363,4902,5714,
#Deleted in new
chr2	55918026	55923795	chr2:55918026-55923795	0	-	55918026	55922440	789624	4	25,49,388,85,	0,192,4333,5684,
#Deleted in new
chr2	55921946	55923797	chr2:55921946-55923797	0	-	55921946	55921946	8553170	2	501,87,	0,1764,
#Deleted in new
chr2	55922359	55923782	chr2:55922359-55923782	0	-	55922359	55922440	789624	4	88,138,41,72,	0,250,539,1351,
#Deleted in new
chr2	55922407	55923782	chr2:55922407-55923782	0	-	55922407	55922407	8553170	2	532,72,	0,1303,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	55951653	55952014	chr2:55951653-55952014	3	-	55951653	55951653	8553170	1	361,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	55952157	56181652	chr2:55952157-56181652	3	+	55952157	55952157	8553170	7	82,77,111,195,140,144,526,	0,130211,195472,217843,225067,227888,228969,
#Partially deleted in new
chr2	55963190	56047326	chr2:55963190-56047326	3	-	55963190	55963190	789624	3	692,103,105,	0,50418,84031,
#Deleted in new
chr2	55982966	55983076	chr2:55982966-55983076	3	-	55982966	55982966	5263520	1	110,	0,
#Deleted in new
chr2	55988949	55989059	chr2:55988949-55989059	3	-	55988949	55988949	5263520	1	110,	0,
#Deleted in new
chr2	56000713	56000795	chr2:56000713-56000795	3	-	56000713	56000713	5263520	1	82,	0,
#Partially deleted in new
chr2	56077416	56090382	chr2:56077416-56090382	3	-	56077416	56077416	8553170	2	639,73,	0,12893,
#Partially deleted in new
chr2	56147629	56386171	chr2:56147629-56386171	3	+	56147629	56147629	8553170	4	111,195,77,1906,	0,22371,195249,236636,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	56173533	56184908	chr2:56173533-56184908	3	-	56173533	56173533	8553170	3	2617,173,285,	0,4029,11090,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	56174739	56185770	chr2:56174739-56185770	0	-	56174739	56174739	789624	3	1411,173,73,	0,2823,10958,
#Partially deleted in new
chr2	56175550	56184913	chr2:56175550-56184913	1	-	56175550	56175550	8553170	4	600,173,560,290,	0,2012,4052,9073,
#Partially deleted in new
chr2	56184122	56386173	chr2:56184122-56386173	3	+	56184624	56384355	789624	6	778,964,77,135,120,1908,	0,8354,158756,188221,191693,200143,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	56235216	56235330	chr2:56235216-56235330	7	-	56235216	56235216	16724991	1	114,	0,
#Partially deleted in new
chr2	56750299	56750563	chr2:56750299-56750563	7	+	56750299	56750299	16724991	1	264,	0,
#Partially deleted in new
chr2	57048349	57049336	chr2:57048349-57049336	7	-	57048349	57048349	16724991	1	987,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	57289647	57380132	chr2:57289647-57380132	3	-	57289647	57289647	8553170	6	674,787,96,49,291,80,	0,2580,4475,4988,8551,90405,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	57429547	57430693	chr2:57429547-57430693	7	-	57429547	57429547	16724991	3	265,66,48,	0,592,1098,
#Deleted in new
chr2	57544534	57544599	chr2:57544534-57544599	3	+	57544534	57544534	8553170	1	65,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	57755427	57765210	chr2:57755427-57765210	7	+	57755427	57755427	16724991	2	360,499,	0,9284,
#Deleted in new
chr2	57764953	57766052	chr2:57764953-57766052	5	+	57764953	57764953	16724991	1	1099,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr2	57907628	58159840	chr2:57907628-58159840	1	+	58048831	58154770	8553170	19	211,71,106,118,101,327,141,50,70,88,106,93,133,121,59,167,159,44,492,	0,110387,118036,119115,120669,125598,141198,176460,177252,178710,180712,182002,215472,224179,227512,232037,238687,247130,251720,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	57907650	58159871	chr2:57907650-58159871	1	+	58048831	58154762	0	16	189,106,327,141,50,70,88,106,93,133,121,59,167,159,49,523,	0,118014,125576,141176,176438,177230,178688,180690,181980,215450,224157,227490,232015,238665,247103,251698,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	57907650	58159867	chr2:57907650-58159867	3	+	58048831	58159693	0	16	189,106,118,327,141,50,70,88,106,93,133,121,59,167,159,519,	0,118014,119093,125576,141176,176438,177230,178688,180690,181980,215450,224157,227490,232015,238665,251698,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	57907651	58033663	chr2:57907651-58033663	0	+	57907651	57907651	8553170	6	188,71,106,118,101,437,	0,110364,118013,119092,120646,125575,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	57907655	58033327	chr2:57907655-58033327	0	+	57907655	57907655	8553170	4	184,106,101,101,	0,118009,120642,125571,
#Partially deleted in new
chr2	58046641	58159920	chr2:58046641-58159920	1	+	58088350	58159693	0	12	227,141,50,88,106,93,133,121,59,167,159,572,	0,2185,37447,39697,41699,42989,76459,85166,88499,93024,99674,112707,
#Partially deleted in new
chr2	58046690	58159871	chr2:58046690-58159871	1	+	58048831	58159693	0	13	178,141,50,70,88,106,93,133,121,59,167,159,523,	0,2136,37398,38190,39648,41650,42940,76410,85117,88450,92975,99625,112658,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	58046711	58159784	chr2:58046711-58159784	0	+	58048831	58058395	789624	14	110,141,137,50,70,88,106,93,133,121,59,167,159,436,	0,2115,11640,37377,38169,39627,41629,42919,76389,85096,88429,92954,99604,112637,
#Partially deleted in new
chr2	58046714	58159784	chr2:58046714-58159784	1	+	58048900	58159693	0	13	107,87,50,70,88,106,93,133,121,59,167,159,436,	0,2166,37374,38166,39624,41626,42916,76386,85093,88426,92951,99601,112634,
#Partially deleted in new
chr2	58046874	58084927	chr2:58046874-58084927	0	+	58048577	58084927	789624	5	254,61,141,50,47,	0,1652,1952,37214,38006,
#Partially deleted in new
chr2	58159242	58241323	chr2:58159242-58241323	1	-	58159764	58241313	789624	13	558,72,117,82,46,151,69,97,101,57,61,59,106,	0,865,2279,3623,3786,6481,39351,44887,62699,67485,70571,72811,81975,
#Partially deleted in new
chr2	58159246	58241350	chr2:58159246-58241350	3	-	58159764	58241313	0	14	554,72,117,82,46,84,151,69,97,101,57,61,59,133,	0,861,2275,3619,3782,4187,6477,39347,44883,62695,67481,70567,72807,81971,
#Partially deleted in new
chr2	58159246	58241350	chr2:58159246-58241350	1	-	58159764	58241313	0	14	554,72,117,82,46,84,151,84,97,101,57,61,59,133,	0,861,2275,3619,3782,4187,6477,39332,44883,62695,67481,70567,72807,81971,
#Partially deleted in new
chr2	58159754	58241302	chr2:58159754-58241302	1	-	58159764	58241240	789624	10	46,72,117,82,46,84,151,69,97,85,	0,353,1767,3111,3274,3679,5969,38839,44375,81463,
#Partially deleted in new
chr2	58160117	58241372	chr2:58160117-58241372	0	-	58160117	58241313	789624	10	62,117,82,46,84,151,69,97,101,155,	0,1404,2748,2911,3316,5606,38476,44012,61824,81100,
#Partially deleted in new
chr2	58161622	58241325	chr2:58161622-58241325	0	-	58161622	58241313	789624	6	16,82,46,84,151,108,	0,1243,1406,1811,4101,79595,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	58162864	58165803	chr2:58162864-58165803	0	-	58162864	58162864	8553170	2	653,80,	0,2859,
#Partially deleted in new
chr2	58163028	58241311	chr2:58163028-58241311	0	-	58163028	58241311	789624	11	46,84,151,45,69,97,101,57,61,59,94,	0,405,2695,31200,35565,41101,58913,63699,66785,69025,78189,
#Partially deleted in new
chr2	58163435	58241348	chr2:58163435-58241348	0	-	58163435	58241240	789624	5	82,151,84,97,131,	0,2288,35143,40694,77782,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	58213504	58241259	chr2:58213504-58241259	0	-	58213651	58241259	789624	6	202,101,57,61,59,42,	0,8437,13223,16309,18549,27713,
#Deleted in new
chr2	58241348	58241686	chr2:58241348-58241686	3	+	58241348	58241348	8553170	1	338,	0,
#Partially deleted in new
chr2	58251439	58252525	chr2:58251439-58252525	7	+	58251439	58251439	16724991	1	1086,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	58275876	58296548	chr2:58275876-58296548	3	+	58275876	58275876	789624	3	306,356,151,	0,17812,20521,
#Partially deleted in new
chr2	58427798	58925701	chr2:58427798-58925701	1	+	58427798	58427798	8553170	6	182,81,62,177,82,91,	0,585,228851,422631,496746,497812,
#Partially deleted in new
chr2	58428337	58925701	chr2:58428337-58925701	0	+	58428337	58428337	8553170	5	127,68,177,82,91,	0,33440,422092,496207,497273,
#Partially deleted in new
chr2	58428337	58925701	chr2:58428337-58925701	0	+	58428337	58428337	8553170	5	127,62,177,82,91,	0,228312,422092,496207,497273,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	58428337	59063766	chr2:58428337-59063766	3	+	58428337	58428337	8553170	12	127,68,62,177,82,299,79,69,63,27,36,2988,	0,33440,228312,422092,496207,497273,575611,585992,591291,594618,630223,632441,
#Partially deleted in new
chr2	58428384	59003992	chr2:58428384-59003992	0	+	58428384	58428384	8553170	5	80,177,82,299,44,	0,422045,496160,497226,575564,
#Partially deleted in new
chr2	58428384	58696055	chr2:58428384-58696055	0	+	58428384	58428384	8553170	3	80,62,422,	0,228265,267249,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	58428411	59061649	chr2:58428411-59061649	0	+	58428411	58428411	8553170	12	53,62,177,82,299,79,69,63,27,46,36,871,	0,228238,422018,496133,497199,575537,585918,591217,594544,604758,630149,632367,
#Deleted in new
chr2	58460291	58462032	chr2:58460291-58462032	7	-	58460291	58460291	16724991	1	1741,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	58520752	59061653	chr2:58520752-59061653	0	+	58520752	58520752	789624	14	185,62,177,28,82,299,79,69,63,27,155,46,36,875,	0,135897,329677,391966,403792,404858,483196,493577,498876,502203,504083,512417,537808,540026,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	58924601	58931076	chr2:58924601-58931076	0	+	58924601	58924601	8553170	3	25,299,441,	0,1009,6034,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	59014353	59277688	chr2:59014353-59277688	3	+	59014353	59014353	8553170	9	45,63,27,36,1072,73,108,69,157,	0,5275,8602,44207,46425,93403,121765,185952,263178,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	59217707	59279400	chr2:59217707-59279400	3	+	59217707	59217707	789624	3	67,100,1869,	0,37455,59824,
#Partially deleted in new
chr2	59238713	59249511	chr2:59238713-59249511	0	-	59238713	59238713	8553170	3	188,183,23,	0,2207,10775,
#Partially deleted in new
chr2	59238715	59249567	chr2:59238715-59249567	0	-	59238715	59238715	8553170	3	186,111,79,	0,2277,10773,
#Partially deleted in new
chr2	59238715	59249672	chr2:59238715-59249672	0	-	59238715	59238715	8553170	3	186,52,184,	0,1574,10773,
#Partially deleted in new
chr2	59238721	59388365	chr2:59238721-59388365	1	-	59238721	59238721	8553170	4	180,111,170,304,	0,2271,145902,149340,
#Partially deleted in new
chr2	59240941	59733396	chr2:59240941-59733396	3	-	59240941	59240941	8553170	5	162,128,156,82,179,	0,353863,359431,478634,492276,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	59295379	59388159	chr2:59295379-59388159	1	-	59295379	59295379	8553170	4	215,93,61,98,	0,2835,26878,92682,
#Partially deleted in new
chr2	59434551	59442190	chr2:59434551-59442190	3	+	59434551	59434551	8553170	5	537,195,161,118,98,	0,617,3347,6078,7541,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	59435212	59442261	chr2:59435212-59442261	0	+	59435212	59435212	8553170	3	151,118,169,	0,5417,6880,
#Deleted in new
chr2	59514889	59515124	chr2:59514889-59515124	7	+	59514889	59514889	16724991	1	235,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	59647620	59647723	chr2:59647620-59647723	3	+	59647620	59647620	8553170	1	103,	0,
#Partially deleted in new
chr2	59669215	59733331	chr2:59669215-59733331	1	-	59669215	59669215	8553170	3	333,109,114,	0,17044,64002,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	59694761	59694869	chr2:59694761-59694869	7	+	59694761	59694761	16724991	1	108,	0,
#Partially deleted in new
chr2	59719426	60076680	chr2:59719426-60076680	3	-	59719426	59719426	8553170	6	231,105,126,114,61,212,	0,20690,107719,139024,276148,357042,
#Partially deleted in new
chr2	60057600	60071108	chr2:60057600-60071108	3	+	60057600	60057600	8553170	4	95,102,161,875,	0,1357,8823,12633,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	60336445	60342793	chr2:60336445-60342793	1	-	60336445	60336445	8553170	4	2275,166,107,2628,	0,2870,3156,3720,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	60340165	60383036	chr2:60340165-60383036	1	-	60340165	60340165	8553170	8	73,180,81,500,579,129,119,93,	0,2651,2922,11643,19104,29743,38336,42778,
#Deleted in new
chr2	60350594	60353016	chr2:60350594-60353016	0	-	60350594	60350594	8553170	2	1714,291,	0,2131,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	60359093	60439828	chr2:60359093-60439828	3	-	60359093	60359093	8553170	4	755,129,123,265,	0,10815,42994,80470,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	60359215	60391375	chr2:60359215-60391375	0	-	60359215	60359215	789624	2	633,70,	0,32090,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	60384604	60384763	chr2:60384604-60384763	3	+	60384604	60384604	8553170	1	159,	0,
#Deleted in new
chr2	60387361	60387445	chr2:60387361-60387445	3	-	60387361	60387361	5263520	1	84,	0,
#Partially deleted in new
chr2	60450519	60554467	chr2:60450519-60554467	1	-	60452564	60553270	789624	5	2147,143,330,178,590,	0,11762,95451,102696,103358,
#Partially deleted in new
chr2	60451145	60553571	chr2:60451145-60553571	1	-	60452574	60553270	0	5	1521,1743,102,330,356,	0,9536,17586,94825,102070,
#Partially deleted in new
chr2	60451166	60553634	chr2:60451166-60553634	1	-	60452564	60553270	0	5	1500,143,102,330,419,	0,11115,17565,94804,102049,
#Partially deleted in new
chr2	60451780	60550925	chr2:60451780-60550925	1	-	60452564	60550916	789624	5	886,143,102,330,58,	0,10501,16951,94190,99087,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	60451889	60546201	chr2:60451889-60546201	0	-	60468832	60546201	789624	5	777,143,102,76,231,	0,10392,16842,26274,94081,
#Deleted in new
chr2	60452157	60460456	chr2:60452157-60460456	0	-	60460403	60460456	789624	2	509,55,	0,8244,
#Partially deleted in new
chr2	60452157	60553558	chr2:60452157-60553558	1	-	60452564	60553270	789624	4	509,143,330,343,	0,10124,93813,101058,
#Deleted in new
chr2	60452159	60453081	chr2:60452159-60453081	0	-	60452159	60452159	8553170	2	507,127,	0,795,
#Partially deleted in new
chr2	60452313	60550907	chr2:60452313-60550907	0	-	60452564	60550907	789624	4	353,143,330,40,	0,9968,93657,98554,
#Partially deleted in new
chr2	60452421	60553409	chr2:60452421-60553409	1	-	60452564	60553270	789624	4	245,1895,330,194,	0,8108,93549,100794,
#Partially deleted in new
chr2	60452499	60553507	chr2:60452499-60553507	0	-	60508705	60553270	789624	7	167,1063,143,102,219,330,292,	0,8182,9782,16232,56106,93471,100716,
#Partially deleted in new
chr2	60452519	60528535	chr2:60452519-60528535	0	-	60452519	60452519	8553170	5	147,143,102,140,87,	0,9762,16212,75135,75929,
#Partially deleted in new
chr2	60452648	60484465	chr2:60452648-60484465	0	-	60452648	60452648	8553170	4	18,143,102,463,	0,9633,16083,31354,
#Partially deleted in new
chr2	60457191	60555154	chr2:60457191-60555154	3	-	60460403	60553270	0	4	5233,102,330,1939,	0,11540,88779,96024,
#Partially deleted in new
chr2	60457678	60553658	chr2:60457678-60553658	1	-	60460403	60553270	0	3	4746,330,443,	0,88292,95537,
#Partially deleted in new
chr2	60459819	60536206	chr2:60459819-60536206	0	-	60459819	60459819	8553170	3	2605,102,68,	0,8912,76319,
#Partially deleted in new
chr2	60461903	60550907	chr2:60461903-60550907	0	-	60461903	60550907	789624	4	521,102,330,40,	0,6828,84067,88964,
#Partially deleted in new
chr2	60461908	60527855	chr2:60461908-60527855	0	-	60461908	60461908	8553170	3	516,102,201,	0,6823,65746,
#Partially deleted in new
chr2	60468739	60546394	chr2:60468739-60546394	0	-	60468739	60468739	8553170	2	94,424,	0,77231,
#Deleted in new
chr2	60495685	60499964	chr2:60495685-60499964	3	+	60495685	60495685	8553170	3	77,46,309,	0,871,3970,
#Partially deleted in new
chr2	60522080	60553461	chr2:60522080-60553461	1	-	60522875	60553270	789624	3	803,330,246,	0,23890,31135,
#Deleted in new
chr2	60524488	60528215	chr2:60524488-60528215	0	-	60524488	60524488	8553170	1	3727,	0,
#Partially deleted in new
chr2	60532859	60546283	chr2:60532859-60546283	0	-	60538376	60546283	789624	2	5690,313,	0,13111,
#Partially deleted in new
chr2	60541782	60553500	chr2:60541782-60553500	1	-	60541881	60553270	0	3	143,330,285,	0,4188,11433,
#Partially deleted in new
chr2	60541840	60546259	chr2:60541840-60546259	0	-	60541915	60546259	789624	2	80,289,	0,4130,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	60541843	60553632	chr2:60541843-60553632	1	-	60545962	60553270	789624	2	4457,417,	0,11372,
#Deleted in new
chr2	60544229	60546180	chr2:60544229-60546180	0	-	60544317	60546180	789624	2	162,210,	0,1741,
#Deleted in new
chr2	60545917	60549913	chr2:60545917-60549913	0	-	60545917	60545917	8553170	2	383,139,	0,3857,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	60640704	60641002	chr2:60640704-60641002	3	+	60640704	60640704	8553170	1	298,	0,
#Deleted in new
chr2	60682872	60683244	chr2:60682872-60683244	7	-	60682872	60682872	16724991	1	372,	0,
#Deleted in new
chr2	60711483	60711920	chr2:60711483-60711920	7	+	60711483	60711483	16724991	1	437,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	60719639	60719741	chr2:60719639-60719741	3	+	60719639	60719639	8553170	1	102,	0,
#Deleted in new
chr2	60734894	60735715	chr2:60734894-60735715	7	-	60734894	60734894	16724991	1	821,	0,
#Partially deleted in new
chr2	60756229	60798963	chr2:60756229-60798963	3	+	60756478	60797160	0	22	266,162,67,82,110,54,112,90,139,73,121,85,54,120,110,122,161,89,221,66,57,1902,	0,3904,5511,12240,12551,14228,15289,18804,23407,24477,25655,26456,26926,30717,31281,35531,35899,37397,37741,38480,38734,40832,
#Partially deleted in new
chr2	60756252	60798468	chr2:60756252-60798468	0	+	60756252	60756252	8553170	19	97,162,67,82,110,54,90,139,73,121,85,54,120,110,122,161,89,1050,1407,	0,3881,5488,12217,12528,14205,18781,23384,24454,25632,26433,26903,30694,31258,35508,35876,37374,37718,40809,
#Partially deleted in new
chr2	60756265	60798466	chr2:60756265-60798466	0	+	60760248	60781888	789624	21	84,162,67,82,110,54,112,90,139,121,85,54,120,110,122,161,89,221,66,57,1405,	0,3868,5475,12204,12515,14192,15253,18768,23371,25619,26420,26890,30681,31245,35495,35863,37361,37705,38444,38698,40796,
#Partially deleted in new
chr2	60760134	60798466	chr2:60760134-60798466	0	+	60760134	60775066	789624	20	161,67,82,110,54,90,139,73,121,85,54,120,122,161,89,221,66,57,47,1405,	0,1606,8335,8646,10323,14899,19502,20572,21750,22551,23021,26812,31626,31994,33492,33836,34575,34829,35155,36927,
#Partially deleted in new
chr2	60779553	60783193	chr2:60779553-60783193	0	+	60779553	60779553	8553170	5	222,73,121,85,38,	0,1153,2331,3132,3602,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	60781974	60802085	chr2:60781974-60802085	0	+	60781974	60797160	789624	11	31,85,54,120,110,122,161,89,221,57,5024,	0,711,1181,4972,5536,9786,10154,11652,11996,12989,15087,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	60791480	60794004	chr2:60791480-60794004	0	+	60791480	60791480	8553170	4	402,161,89,34,	0,648,2146,2490,
#Partially deleted in new
chr2	60825131	60881314	chr2:60825131-60881314	3	-	60825131	60825131	8553170	4	154,170,147,83,	0,18925,31642,56100,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	60831663	60831929	chr2:60831663-60831929	3	-	60831663	60831663	8553170	1	266,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	60847759	60881314	chr2:60847759-60881314	1	-	60847759	60847759	789624	3	1475,147,83,	0,9014,33472,
#Deleted in new
chr2	60852259	60852743	chr2:60852259-60852743	7	+	60852259	60852259	16724991	1	484,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	60881520	60931610	chr2:60881520-60931610	3	+	60881840	60922535	789624	11	330,143,149,92,141,105,213,69,96,69,9848,	0,10162,12876,19471,35356,36670,36873,38520,38862,39053,40242,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	60881655	60922984	chr2:60881655-60922984	1	+	60881840	60922535	789624	10	195,143,149,92,141,105,213,69,69,1222,	0,10027,12741,19336,35221,36535,36738,38385,38918,40107,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	60894396	60901083	chr2:60894396-60901083	0	+	60894396	60899006	789624	3	149,1915,92,	0,4573,6595,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	60925908	60931610	chr2:60925908-60931610	3	+	60925908	60925908	8553170	1	5702,	0,
#Partially deleted in new
chr2	60936818	60938049	chr2:60936818-60938049	7	-	60936818	60936818	16724991	1	1231,	0,
#Partially deleted in new
chr2	60938203	60938604	chr2:60938203-60938604	7	-	60938203	60938203	16724991	1	401,	0,
#Partially deleted in new
chr2	60940221	61018259	chr2:60940221-61018259	0	-	60940221	60940221	8553170	16	2212,100,143,118,56,77,57,126,86,65,2556,35,87,255,141,252,	0,4787,7821,12775,13711,13860,14796,20170,21241,22604,24836,31301,66335,68539,71543,77786,
#Partially deleted in new
chr2	60941968	61018254	chr2:60941968-61018254	3	-	60942394	61011890	0	18	465,100,143,118,56,77,57,126,86,65,46,62,112,35,87,255,141,247,	0,3040,6074,11028,11964,12113,13049,18423,19494,20857,23089,23454,25533,29554,64588,66792,69796,76039,
#Partially deleted in new
chr2	60942224	61017193	chr2:60942224-61017193	1	-	60942394	61011890	0	18	209,100,143,118,56,77,57,126,86,65,46,62,112,35,87,255,141,45,	0,2784,5818,10772,11708,11857,12793,18167,19238,20601,22833,23198,25277,29298,64332,66536,69540,74924,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	60998751	60998888	chr2:60998751-60998888	7	+	60998751	60998751	16724991	1	137,	0,
#Partially deleted in new
chr2	61008780	61017431	chr2:61008780-61017431	0	-	61008780	61011890	789624	3	235,141,195,	0,2984,8456,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	61008780	61017193	chr2:61008780-61017193	0	-	61010825	61011890	789624	4	235,233,141,49,	0,1875,2984,8364,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	61009847	61017193	chr2:61009847-61017193	1	-	61010825	61011890	789624	3	1041,141,45,	0,1917,7301,
#Deleted in new
chr2	61017224	61019067	chr2:61017224-61019067	1	+	61017759	61018261	789624	2	627,906,	0,937,
#Deleted in new
chr2	61017561	61019081	chr2:61017561-61019081	1	+	61017759	61018202	789624	3	54,156,898,	0,134,622,
#Partially deleted in new
chr2	61017719	61031864	chr2:61017719-61031864	0	+	61017719	61017719	8553170	2	155,446,	0,13699,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	61017721	61051990	chr2:61017721-61051990	3	+	61017759	61048770	789624	4	130,695,126,3519,	0,13697,28004,30750,
#Deleted in new
chr2	61017729	61019080	chr2:61017729-61019080	1	+	61017759	61018261	789624	2	122,892,	0,459,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	61065870	61089670	chr2:61065870-61089670	0	+	61065870	61065870	8553170	11	157,137,47,159,187,94,239,59,161,87,1313,	0,2978,3781,4471,5735,7587,11049,15581,17283,22288,22487,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr2	61065879	61124277	chr2:61065879-61124277	0	+	61070350	61076933	789624	21	148,137,159,187,239,59,161,87,111,124,153,146,100,33,100,92,29,74,89,92,2152,	0,2969,4462,5726,11040,15572,17274,22279,22478,26584,31820,37973,40683,42437,43317,50099,51477,51587,52148,55305,56246,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr2	61065932	61124280	chr2:61065932-61124280	3	+	61070350	61122162	789624	22	95,137,159,187,94,239,59,161,87,111,124,153,146,100,33,100,92,29,74,89,92,2155,	0,2916,4409,5673,7525,10987,15519,17221,22226,22425,26531,31767,37920,40630,42384,43264,50046,51424,51534,52095,55252,56193,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr2	61066227	61138034	chr2:61066227-61138034	1	+	61070350	61134232	789624	22	231,137,159,187,94,239,59,161,87,111,124,153,146,100,33,100,92,29,74,89,140,571,	0,2621,4114,5378,7230,10692,15224,16926,21931,22130,26236,31472,37625,40335,42089,42969,49751,51129,51239,51800,67909,71236,
#Partially deleted in new
chr2	61070325	61134232	chr2:61070325-61134232	1	+	61070350	61134232	789624	19	175,187,94,239,59,161,87,111,124,153,146,100,33,100,92,29,74,89,96,	0,1280,3132,6594,11126,12828,17833,18032,22138,27374,33527,36237,37991,38871,45653,47031,47141,47702,63811,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr2	61070325	61124274	chr2:61070325-61124274	1	+	61070350	61122162	789624	20	175,187,94,239,59,161,87,111,124,153,146,100,33,100,92,29,74,89,92,2149,	0,1280,3132,6594,11126,12828,17833,18032,22138,27374,33527,36237,37991,38871,45653,47031,47141,47702,50859,51800,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr2	61070325	61124276	chr2:61070325-61124276	1	+	61076926	61122162	789624	19	175,187,239,59,161,87,111,124,153,146,100,33,100,92,29,74,89,92,2151,	0,1280,6594,11126,12828,17833,18032,22138,27374,33527,36237,37991,38871,45653,47031,47141,47702,50859,51800,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	61071657	61075173	chr2:61071657-61075173	0	+	61071657	61071657	8553170	3	135,94,191,	0,1800,3325,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	61090433	61093364	chr2:61090433-61093364	0	+	61090433	61090433	8553170	3	261,124,84,	0,2030,2847,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	61115786	61164825	chr2:61115786-61164825	3	+	61115786	61115786	8553170	8	284,29,74,89,140,114,181,472,	0,1570,1680,2241,18350,47055,47265,48567,
#Partially deleted in new
chr2	61115978	61121565	chr2:61115978-61121565	0	+	61115978	61115978	8553170	5	92,29,74,89,381,	0,1378,1488,2049,5206,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	61117055	61118075	chr2:61117055-61118075	0	+	61117055	61117055	8553170	2	485,48,	0,972,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	61141591	61144950	chr2:61141591-61144950	3	-	61141591	61141591	789624	2	2354,178,	0,3181,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	61143554	61144952	chr2:61143554-61144952	0	-	61143554	61143554	8553170	2	712,180,	0,1218,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	61144405	61144969	chr2:61144405-61144969	0	-	61144405	61144405	8553170	2	237,197,	0,367,
#Partially deleted in new
chr2	61145067	61164808	chr2:61145067-61164808	1	+	61163058	61164527	789624	4	129,114,181,455,	0,17774,17984,19286,
#Partially deleted in new
chr2	61145107	61164809	chr2:61145107-61164809	1	+	61163058	61164527	789624	3	89,181,456,	0,17944,19246,
#Partially deleted in new
chr2	61145129	61163142	chr2:61145129-61163142	0	+	61163058	61163142	789624	4	67,151,114,91,	0,12732,17712,17922,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	61145130	61163163	chr2:61145130-61163163	0	+	61157877	61159341	789624	5	66,151,122,114,112,	0,12731,14187,17711,17921,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	61151432	61162096	chr2:61151432-61162096	3	-	61151432	61151432	8553170	2	282,82,	0,10582,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	61151815	61162033	chr2:61151815-61162033	1	-	61151815	61151815	8553170	2	313,19,	0,10199,
#Deleted in new
chr2	61161697	61162105	chr2:61161697-61162105	1	-	61161697	61161697	8553170	2	198,91,	0,317,
#Partially deleted in new
chr2	61162190	61164825	chr2:61162190-61164825	3	+	61162493	61164527	789624	5	130,194,132,142,472,	0,225,651,900,2163,
#Partially deleted in new
chr2	61162493	61164829	chr2:61162493-61164829	1	+	61162493	61164527	789624	4	116,114,181,476,	0,348,558,1860,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	61177417	61187551	chr2:61177417-61187551	5	+	61177417	61177417	16724991	7	967,191,86,89,117,52,935,	0,1563,3902,7294,8084,9028,9199,
#Partially deleted in new
chr2	61177427	61181325	chr2:61177427-61181325	4	+	61177427	61177427	16724991	3	261,186,6,	0,1558,3892,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	61177528	61191203	chr2:61177528-61191203	7	+	61177528	61177528	16724991	6	1643,86,89,117,52,4587,	0,3791,7183,7973,8917,9088,
#Partially deleted in new
chr2	61177538	61186786	chr2:61177538-61186786	5	+	61177538	61177538	16724991	9	80,191,86,116,89,117,102,52,170,	0,1442,3781,6008,7173,7963,8441,8907,9078,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	61177701	61187499	chr2:61177701-61187499	4	+	61177701	61177701	16724991	7	1470,86,116,89,117,52,883,	0,3618,5845,7010,7800,8744,8915,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	61177745	61187538	chr2:61177745-61187538	4	+	61177745	61177745	16724991	3	1426,86,2827,	0,3574,6966,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	61177927	61187499	chr2:61177927-61187499	4	+	61177927	61177927	16724991	6	1244,86,213,117,52,883,	0,3392,6784,7574,8518,8689,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	61178377	61186769	chr2:61178377-61186769	4	+	61178377	61178377	16724991	8	794,86,116,89,117,102,52,153,	0,2942,5169,6334,7124,7602,8068,8239,
#Partially deleted in new
chr2	61178667	61186912	chr2:61178667-61186912	4	+	61178667	61178667	16724991	5	504,86,89,996,296,	0,2652,6044,6834,7949,
#Partially deleted in new
chr2	61179130	61181680	chr2:61179130-61181680	4	+	61179130	61179130	16724991	2	41,361,	0,2189,
#Partially deleted in new
chr2	61181337	61186807	chr2:61181337-61186807	4	+	61181337	61181337	16724991	6	68,116,89,117,52,191,	0,2209,3374,4164,5108,5279,
#Partially deleted in new
chr2	61181350	61185746	chr2:61181350-61185746	4	+	61181350	61181350	16724991	4	55,116,89,245,	0,2196,3361,4151,
#Deleted in new
chr2	61183557	61186807	chr2:61183557-61186807	4	+	61183557	61183557	16724991	4	465,89,996,191,	0,1154,1944,3059,
#Deleted in new
chr2	61184711	61186810	chr2:61184711-61186810	4	+	61184711	61184711	16724991	5	89,117,27,52,194,	0,790,1127,1734,1905,
#Deleted in new
chr2	61185525	61186775	chr2:61185525-61186775	4	+	61185525	61185525	16724991	2	93,330,	0,920,
#Partially deleted in new
chr2	61187462	61470769	chr2:61187462-61470769	3	-	61188101	61470692	789624	80	1247,160,144,141,80,124,125,105,108,127,79,158,635,148,105,45,105,49,152,75,169,86,81,66,48,76,65,96,54,79,154,173,95,78,57,147,66,161,184,121,56,105,153,125,41,83,201,87,84,123,126,210,101,148,127,160,100,114,155,83,96,90,128,116,215,611,131,36,130,126,93,82,62,193,68,150,51,421,88,120,	0,1447,2808,3055,5438,15677,16793,17034,18554,19297,21436,24309,26597,32847,34039,35156,35597,35785,39604,41182,41364,42085,44989,48382,48563,48698,48862,54097,54303,57747,58861,61048,68921,69410,69589,69741,72248,77934,78521,90702,90925,92781,93627,95682,95946,97412,101214,106001,107486,107705,109337,113488,113891,124077,124321,127122,127412,130191,131710,137912,143813,146419,151888,152103,156352,160407,161293,161787,162797,163105,182858,183035,190900,192706,195806,207390,207720,218245,233283,283187,
#Partially deleted in new
chr2	61187462	61241614	chr2:61187462-61241614	0	-	61188101	61241614	789624	26	1247,160,144,141,80,105,108,127,79,158,635,148,105,45,105,49,152,75,169,86,81,66,48,76,65,55,	0,1447,2808,3055,5438,17034,18554,19297,21436,24309,26597,32847,34039,35156,35597,35785,39604,41182,41364,42085,44989,48382,48563,48698,48862,54097,
#Partially deleted in new
chr2	61187549	61204330	chr2:61187549-61204330	0	-	61188101	61204330	789624	7	1160,160,144,141,80,67,75,	0,1360,2721,2968,5351,15590,16706,
#Partially deleted in new
chr2	61188473	61189796	chr2:61188473-61189796	0	-	61188473	61188473	8553170	3	268,160,99,	0,436,1224,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr2	61189276	61256886	chr2:61189276-61256886	0	-	61189276	61189276	8553170	28	1138,141,80,124,125,105,108,2218,158,148,105,45,105,49,152,75,169,86,81,66,364,96,54,79,154,173,95,14,	0,1241,3624,13863,14979,15220,16740,17483,22495,31033,32225,33342,33783,33971,37790,39368,39550,40271,43175,46568,46749,52283,52489,55933,57047,59234,67107,67596,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	61189453	61191349	chr2:61189453-61191349	0	-	61189453	61189453	8553170	2	961,832,	0,1064,
#Deleted in new
chr2	61190626	61193365	chr2:61190626-61193365	0	-	61190626	61190626	8553170	2	32,465,	0,2274,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	61199978	61200769	chr2:61199978-61200769	3	+	61199978	61199978	8553170	1	791,	0,
#Partially deleted in new
chr2	61204526	61220368	chr2:61204526-61220368	0	-	61204526	61204526	8553170	6	75,108,127,79,158,59,	0,1490,2233,4372,7245,15783,
#Partially deleted in new
chr2	61206787	61214663	chr2:61206787-61214663	0	-	61206787	61206787	8553170	5	99,79,158,159,36,	0,2111,4984,7272,7840,
#Partially deleted in new
chr2	61208898	61222685	chr2:61208898-61222685	0	-	61208898	61208898	8553170	6	79,158,219,148,105,67,	0,2873,5161,11411,12603,13720,
#Partially deleted in new
chr2	61214599	61301032	chr2:61214599-61301032	0	-	61214599	61214599	8553170	5	95,148,105,126,82,	0,5710,6902,82200,86351,
#Partially deleted in new
chr2	61214626	61221845	chr2:61214626-61221845	0	-	61214626	61214626	8553170	3	68,148,344,	0,5683,6875,
#Deleted in new
chr2	61220192	61221601	chr2:61220192-61221601	0	-	61220192	61220192	8553170	2	265,100,	0,1309,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	61220404	61222975	chr2:61220404-61222975	0	-	61220404	61220404	8553170	3	53,105,357,	0,1097,2214,
#Partially deleted in new
chr2	61221558	61223661	chr2:61221558-61223661	0	-	61221558	61221558	8553170	4	48,45,105,414,	0,1060,1501,1689,
#Partially deleted in new
chr2	61222631	61223255	chr2:61222631-61223255	0	-	61222631	61222631	8553170	2	32,196,	0,428,
#Partially deleted in new
chr2	61226787	61280333	chr2:61226787-61280333	0	-	61227062	61280333	789624	24	431,75,169,86,81,66,48,76,65,96,54,79,154,173,95,78,57,147,66,161,184,121,56,90,	0,1857,2039,2760,5664,9057,9238,9373,9537,14772,14978,18422,19536,21723,29596,30085,30264,30416,32923,38609,39196,51377,51600,53456,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	61249779	61250621	chr2:61249779-61250621	7	+	61249779	61249779	16724991	3	88,133,176,	0,441,666,
#Deleted in new
chr2	61265265	61266039	chr2:61265265-61266039	0	-	61265265	61265265	8553170	2	292,56,	0,718,
#Partially deleted in new
chr2	61265584	61281151	chr2:61265584-61281151	0	-	61265584	61265584	8553170	5	583,121,56,105,62,	0,12580,12803,14659,15505,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	61277701	61281139	chr2:61277701-61281139	0	-	61277701	61277701	8553170	4	584,56,105,50,	0,686,2542,3388,
#Partially deleted in new
chr2	61348271	61470690	chr2:61348271-61470690	0	-	61394995	61470690	789624	13	209,131,36,130,126,93,82,62,193,68,150,88,41,	0,484,978,1988,2296,22049,22226,30091,31897,34997,46581,72474,122378,
#Deleted in new
chr2	61416886	61417197	chr2:61416886-61417197	7	-	61416886	61416886	16724991	1	311,	0,
#Deleted in new
chr2	61417243	61417378	chr2:61417243-61417378	3	-	61417243	61417243	789624	1	135,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	61471187	61482720	chr2:61471187-61482720	1	+	61471187	61471187	8553170	3	192,259,94,	0,9137,11439,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	61471355	61482926	chr2:61471355-61482926	1	+	61471355	61471355	8553170	3	24,60,300,	0,393,11271,
#Partially deleted in new
chr2	61477848	61538283	chr2:61477848-61538283	3	-	61478819	61533897	0	25	1118,97,160,135,169,195,107,184,135,164,157,182,139,198,159,129,120,49,182,45,62,73,102,132,722,	0,3336,4531,5108,6088,7919,10316,10739,12793,14186,14476,14718,15066,16045,17606,19030,20824,21016,21864,24147,24400,44762,48571,55923,59713,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr2	61477933	61538231	chr2:61477933-61538231	0	-	61526398	61533897	789624	24	1033,97,160,135,169,195,107,184,135,164,157,1525,159,129,120,49,182,45,62,73,64,1030,132,670,	0,3251,4446,5023,6003,7834,10231,10654,12708,14101,14391,14633,17521,18945,20739,20931,21779,24062,24315,44677,47336,47558,55838,59628,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	61477934	61494743	chr2:61477934-61494743	0	-	61477934	61477934	8553170	14	1032,97,160,135,169,195,107,184,135,164,157,182,139,850,	0,3250,4445,5022,6002,7833,10230,10653,12707,14100,14390,14632,14980,15959,
#Partially deleted in new
chr2	61478337	61537110	chr2:61478337-61537110	1	-	61478819	61533897	0	25	629,97,160,135,169,195,107,184,135,164,157,182,139,198,159,129,120,49,182,45,62,73,102,132,401,	0,2847,4042,4619,5599,7430,9827,10250,12304,13697,13987,14229,14577,15556,17117,18541,20335,20527,21375,23658,23911,44273,48082,55434,58372,
#Partially deleted in new
chr2	61478699	61538248	chr2:61478699-61538248	1	-	61478819	61533897	0	26	267,97,160,135,169,195,107,184,135,164,157,182,139,198,159,129,120,49,182,45,62,73,102,132,26,111,	0,2485,3680,4257,5237,7068,9465,9888,11942,13335,13625,13867,14215,15194,16755,18179,19973,20165,21013,23296,23549,43911,47720,55072,58862,59438,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	61482624	61488663	chr2:61482624-61488663	0	-	61482624	61482624	8553170	4	467,2026,107,76,	0,1312,5540,5963,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	61482624	61485958	chr2:61482624-61485958	0	-	61482624	61482624	8553170	3	467,169,191,	0,1312,3143,
#Partially deleted in new
chr2	61483372	61483941	chr2:61483372-61483941	1	+	61483372	61483372	8553170	1	569,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	61485583	61488663	chr2:61485583-61488663	0	-	61485583	61485583	8553170	3	379,107,76,	0,2581,3004,
#Deleted in new
chr2	61492341	61492994	chr2:61492341-61492994	0	-	61492341	61492341	8553170	2	140,428,	0,225,
#Partially deleted in new
chr2	61493637	61495573	chr2:61493637-61495573	0	-	61493637	61493637	8553170	2	454,119,	0,1817,
#Partially deleted in new
chr2	61496960	61498874	chr2:61496960-61498874	0	-	61496960	61496960	8553170	2	47,202,	0,1712,
#Partially deleted in new
chr2	61496993	61526518	chr2:61496993-61526518	0	-	61499847	61526518	789624	6	14,120,49,182,73,99,	0,1679,1871,2719,25617,29426,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	61499716	61502608	chr2:61499716-61502608	0	-	61499716	61499716	8553170	3	178,45,360,	0,2279,2532,
#Partially deleted in new
chr2	61499764	61537117	chr2:61499764-61537117	0	-	61499764	61533897	789624	7	130,45,62,73,102,132,99,	0,2231,2484,22846,26655,34007,37254,
#Partially deleted in new
chr2	61502005	61538626	chr2:61502005-61538626	0	-	61502005	61533897	789624	7	35,62,73,102,132,26,135,	0,243,20605,24414,31766,35556,36486,
#Partially deleted in new
chr2	61502145	61526523	chr2:61502145-61526523	0	-	61502145	61502145	8553170	3	165,73,104,	0,20465,24274,
#Partially deleted in new
chr2	61502289	61525775	chr2:61502289-61525775	0	-	61502289	61502289	8553170	3	21,73,506,	0,20321,22980,
#Partially deleted in new
chr2	61522610	61534278	chr2:61522610-61534278	0	-	61522610	61533897	789624	3	73,102,507,	0,3809,11161,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	61522629	61537640	chr2:61522629-61537640	0	-	61522629	61533897	789624	5	54,102,132,121,79,	0,3790,11142,11928,14932,
#Partially deleted in new
chr2	61526066	61537694	chr2:61526066-61537694	0	-	61526066	61526066	8553170	3	455,132,133,	0,7705,11495,
#Partially deleted in new
chr2	61526150	61533968	chr2:61526150-61533968	0	-	61526150	61526150	8553170	2	371,197,	0,7621,
#Partially deleted in new
chr2	61526461	61536588	chr2:61526461-61536588	0	-	61526461	61533897	789624	3	60,132,387,	0,7310,9740,
#Partially deleted in new
chr2	61526470	61538626	chr2:61526470-61538626	0	-	61526470	61533897	789624	3	51,132,135,	0,7301,12021,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	61527339	61529160	chr2:61527339-61529160	3	+	61527339	61527339	8553170	2	1228,38,	0,1783,
#Partially deleted in new
chr2	61575773	61576394	chr2:61575773-61576394	7	+	61575773	61575773	16724991	1	621,	0,
#Partially deleted in new
chr2	61589497	61589663	chr2:61589497-61589663	7	-	61589497	61589497	16724991	1	166,	0,
#Partially deleted in new
chr2	61710075	61710978	chr2:61710075-61710978	7	-	61710075	61710075	16724991	2	229,380,	0,523,
#Partially deleted in new
chr2	61803142	61803388	chr2:61803142-61803388	7	+	61803142	61803142	16724991	1	246,	0,
#Deleted in new
chr2	61820207	61820566	chr2:61820207-61820566	7	+	61820207	61820207	16724991	1	359,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	61824853	61854092	chr2:61824853-61854092	0	-	61840518	61854041	789624	6	1746,155,100,1105,239,234,	0,2250,11156,14567,17268,29005,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	61824855	61854053	chr2:61824855-61854053	1	-	61826454	61854041	789624	7	1744,155,100,168,1161,239,195,	0,2248,11154,13682,14565,17266,29003,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	61824855	61854143	chr2:61824855-61854143	3	-	61826454	61854041	789624	6	1744,155,100,1161,239,285,	0,2248,11154,14565,17266,29003,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	61824855	61854028	chr2:61824855-61854028	0	-	61836805	61854028	789624	8	1744,155,100,290,168,1161,239,170,	0,2248,11154,11727,13682,14565,17266,29003,
#Partially deleted in new
chr2	61827103	61836484	chr2:61827103-61836484	0	-	61827103	61827103	8553170	2	155,475,	0,8906,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	61835514	61839524	chr2:61835514-61839524	0	-	61835514	61835514	8553170	2	595,104,	0,3906,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	61836056	61854064	chr2:61836056-61854064	0	-	61846951	61854041	789624	5	53,1161,239,238,206,	0,3364,6065,10702,17802,
#Deleted in new
chr2	61856694	61857055	chr2:61856694-61857055	7	+	61856694	61856694	16724991	1	361,	0,
#Deleted in new
chr2	61858136	61860298	chr2:61858136-61860298	7	+	61858136	61858136	16724991	2	216,1818,	0,344,
#Partially deleted in new
chr2	61868088	61888804	chr2:61868088-61888804	3	-	61868691	61888507	789624	14	618,114,235,131,111,97,140,133,122,143,109,90,53,424,	0,1351,3993,4369,4913,5108,8006,8831,9304,10780,12197,15370,16931,20292,
#Partially deleted in new
chr2	61868124	61888671	chr2:61868124-61888671	1	-	61868691	61888507	789624	13	582,114,235,131,111,97,140,133,122,143,109,53,291,	0,1315,3957,4333,4877,5072,7970,8795,9268,10744,12161,16895,20256,
#Partially deleted in new
chr2	61868429	61877026	chr2:61868429-61877026	0	-	61868429	61868429	8553170	4	277,114,140,107,	0,1010,7665,8490,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	61868431	61886082	chr2:61868431-61886082	3	+	61868431	61868431	8553170	2	434,368,	0,17283,
#Deleted in new
chr2	61887947	61888458	chr2:61887947-61888458	0	-	61887947	61887947	8553170	2	310,78,	0,433,
#Partially deleted in new
chr2	61888723	62136058	chr2:61888723-62136058	0	+	61888723	61888723	8553170	3	119,282,228,	0,111977,247107,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	61905646	62136247	chr2:61905646-62136247	3	+	61905678	62135941	0	3	212,282,417,	0,95054,230184,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	61905646	62000875	chr2:61905646-62000875	0	+	61905678	61969085	789624	3	212,162,175,	0,63322,95054,
#Partially deleted in new
chr2	61905646	62001092	chr2:61905646-62001092	0	+	61905646	61905646	8553170	2	212,392,	0,95054,
#Duplicated in new
chr2	61905757	62000847	chr2:61905757-62000847	0	+	61905757	61915732	789624	4	101,92,48,147,	0,9924,12814,94943,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	61928633	61928704	chr2:61928633-61928704	3	-	61928633	61928633	8553170	1	71,	0,
#Partially deleted in new
chr2	62000978	62147247	chr2:62000978-62147247	0	+	62000978	62135941	789624	3	4,149,632,	0,134852,145637,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	62000978	62146914	chr2:62000978-62146914	0	+	62000978	62135941	789624	3	4,149,617,	0,134852,145319,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	62069446	62146881	chr2:62069446-62146881	3	-	62069446	62069446	8553170	8	936,101,153,80,106,57,177,74,	0,21254,30741,48785,49482,68102,76866,77361,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	62079714	62146881	chr2:62079714-62146881	0	-	62079714	62079714	8553170	6	98,54,80,106,177,74,	0,5103,38517,39214,66598,67093,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	62135844	62146926	chr2:62135844-62146926	0	+	62135844	62135941	789624	2	135,608,	0,10474,
#Partially deleted in new
chr2	62146412	62147153	chr2:62146412-62147153	7	+	62146412	62146412	16724991	1	741,	0,
#Partially deleted in new
chr2	62168861	62171163	chr2:62168861-62171163	7	+	62168861	62168861	16724991	2	130,265,	0,2037,
#Partially deleted in new
chr2	62196112	62224731	chr2:62196112-62224731	3	+	62222220	62223414	789624	2	243,2520,	0,26099,
#Deleted in new
chr2	62205825	62205917	chr2:62205825-62205917	3	+	62205825	62205825	5263520	1	92,	0,
#Partially deleted in new
chr2	62215517	62224549	chr2:62215517-62224549	1	+	62222220	62223414	789624	2	98,2338,	0,6694,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	62262386	62262671	chr2:62262386-62262671	3	-	62262386	62262386	8553170	1	285,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	62348947	62350739	chr2:62348947-62350739	7	-	62348947	62348947	16724991	2	458,178,	0,1614,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	62463126	62464070	chr2:62463126-62464070	3	+	62463126	62463126	8553170	2	192,232,	0,712,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	62491177	62491468	chr2:62491177-62491468	3	+	62491177	62491177	8553170	1	291,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	62500220	62506341	chr2:62500220-62506341	3	-	62501208	62506129	789624	4	1267,114,104,312,	0,2216,2470,5809,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	62500626	62511894	chr2:62500626-62511894	0	-	62500626	62500626	8553170	3	1924,104,108,	0,2064,11160,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	62500634	62506469	chr2:62500634-62506469	0	-	62500634	62500634	8553170	3	1916,104,440,	0,2056,5395,
#Deleted in new
chr2	62507544	62507823	chr2:62507544-62507823	7	-	62507544	62507544	16724991	1	279,	0,
#Deleted in new
chr2	62532582	62533059	chr2:62532582-62533059	7	-	62532582	62532582	16724991	1	477,	0,
#Partially deleted in new
chr2	62552462	62553434	chr2:62552462-62553434	7	-	62552462	62552462	16724991	1	972,	0,
#Deleted in new
chr2	62561057	62561423	chr2:62561057-62561423	7	-	62561057	62561057	16724991	1	366,	0,
#Partially deleted in new
chr2	62590254	62662654	chr2:62590254-62662654	3	-	62590254	62590254	8553170	4	323,164,39,47,	0,41147,71640,72353,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	62611871	62662628	chr2:62611871-62662628	1	-	62611871	62611871	8553170	8	352,76,97,59,124,164,39,21,	0,444,1734,13081,17481,19530,50023,50736,
#Partially deleted in new
chr2	62673850	63045597	chr2:62673850-63045597	1	+	62707191	63045500	0	23	233,399,58,96,54,182,140,123,241,187,179,49,903,144,148,125,139,107,124,100,74,115,188,	0,33046,73544,90415,97488,152236,157168,185318,190880,200495,268867,269951,274409,281666,305337,316865,319679,320020,322792,363684,364892,371215,371559,
#Partially deleted in new
chr2	62673877	62826195	chr2:62673877-62826195	0	+	62674085	62826195	789624	5	216,58,96,54,109,	0,73517,90388,97461,152209,
#Partially deleted in new
chr2	62673877	62826258	chr2:62673877-62826258	0	+	62826134	62826258	789624	5	206,58,96,54,172,	0,73517,90388,97461,152209,
#Partially deleted in new
chr2	62673877	62858416	chr2:62673877-62858416	0	+	62826134	62858416	789624	4	206,182,140,11,	0,152209,157141,184528,
#Partially deleted in new
chr2	62705651	62864904	chr2:62705651-62864904	0	+	62707191	62864904	789624	9	85,399,58,96,54,182,140,123,174,	0,1245,41743,58614,65687,120435,125367,153517,159079,
#Partially deleted in new
chr2	62705651	62764336	chr2:62705651-62764336	0	+	62707191	62764336	789624	4	53,399,58,71,	0,1245,41743,58614,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	62705711	62772134	chr2:62705711-62772134	0	+	62705711	62705711	8553170	5	25,399,58,96,796,	0,1185,41683,58554,65627,
#Partially deleted in new
chr2	62705711	62826581	chr2:62705711-62826581	0	+	62705711	62705711	8553170	6	25,399,58,96,54,495,	0,1185,41683,58554,65627,120375,
#Partially deleted in new
chr2	62705741	63046487	chr2:62705741-63046487	1	+	62707191	63045500	0	23	311,399,58,96,54,182,140,123,241,187,179,49,903,144,148,125,139,107,124,100,74,115,1078,	0,1155,41653,58524,65597,120345,125277,153427,158989,168604,236976,238060,242518,249775,273446,284974,287788,288129,290901,331793,333001,339324,339668,
#Partially deleted in new
chr2	62705865	63046487	chr2:62705865-63046487	3	+	62707191	63045500	0	25	187,399,58,96,54,182,140,105,123,241,187,179,49,903,144,148,108,125,139,107,124,100,74,115,1078,	0,1031,41529,58400,65473,120221,125153,152540,153303,158865,168480,236852,237936,242394,249651,273322,282065,284850,287664,288005,290777,331669,332877,339200,339544,
#Deleted in new
chr2	62706312	62706992	chr2:62706312-62706992	0	+	62706312	62706312	8553170	2	442,96,	0,584,
#Partially deleted in new
chr2	62707191	63045500	chr2:62707191-63045500	1	+	62707191	63045500	0	23	104,58,96,54,182,140,123,241,187,179,49,903,144,148,108,125,139,107,124,100,74,115,91,	0,40203,57074,64147,118895,123827,151977,157539,167154,235526,236610,241068,248325,271996,280739,283524,286338,286679,289451,330343,331551,337874,338218,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	62726635	62726740	chr2:62726635-62726740	3	-	62726635	62726635	8553170	1	105,	0,
#Partially deleted in new
chr2	62826063	62858438	chr2:62826063-62858438	3	-	62826063	62826063	8553170	2	185,66,	0,32309,
#Partially deleted in new
chr2	62872037	62881777	chr2:62872037-62881777	0	+	62872037	62872037	8553170	3	59,187,86,	0,2308,9654,
#Deleted in new
chr2	62939915	62940282	chr2:62939915-62940282	7	+	62939915	62939915	16724991	1	367,	0,
#Partially deleted in new
chr2	62942717	62956117	chr2:62942717-62956117	0	+	62942717	62942717	8553170	4	179,49,57,601,	0,1084,5542,12799,
#Partially deleted in new
chr2	62948291	62988004	chr2:62948291-62988004	0	+	62948291	62988004	789624	5	25,69,144,148,74,	0,802,7225,30896,39639,
#Partially deleted in new
chr2	62948932	62979286	chr2:62948932-62979286	0	+	62948932	62979286	789624	2	230,99,	0,30255,
#Partially deleted in new
chr2	62955614	62993976	chr2:62955614-62993976	0	+	62955614	62993976	789624	6	46,145,108,125,139,106,	0,23576,32316,35101,37915,38256,
#Partially deleted in new
chr2	62957325	63047656	chr2:62957325-63047656	3	-	62957325	62957325	8553170	5	166,136,49,166,221,	0,56233,57264,89156,90110,
#Partially deleted in new
chr2	62964961	63045663	chr2:62964961-63045663	0	+	62964961	62964961	8553170	10	76,148,125,139,107,124,100,74,115,254,	0,14226,25754,28568,28909,31681,72573,73781,80104,80448,
#Partially deleted in new
chr2	62979322	62994177	chr2:62979322-62994177	0	+	62979322	62979322	8553170	4	13,125,139,307,	0,11393,14207,14548,
#Deleted in new
chr2	63043921	63047711	chr2:63043921-63047711	1	-	63043921	63043921	789624	4	1522,105,166,276,	0,2115,2560,3514,
#Deleted in new
chr2	63044838	63045655	chr2:63044838-63045655	0	+	63044838	63044838	8553170	2	342,246,	0,571,
#Deleted in new
chr2	63045060	63048640	chr2:63045060-63048640	0	-	63045060	63045060	8553170	4	383,105,166,140,	0,976,1421,3440,
#Deleted in new
chr2	63045175	63046609	chr2:63045175-63046609	0	-	63045175	63045175	8553170	2	268,128,	0,1306,
#Deleted in new
chr2	63045310	63048521	chr2:63045310-63048521	1	-	63045310	63045310	789624	4	133,105,169,133,	0,726,1171,3078,
#Deleted in new
chr2	63050056	63057836	chr2:63050056-63057836	3	+	63052990	63056316	789624	5	96,69,208,152,2336,	0,1192,2823,3990,5444,
#Deleted in new
chr2	63050740	63053546	chr2:63050740-63053546	0	+	63050740	63050740	8553170	2	577,667,	0,2139,
#Deleted in new
chr2	63050801	63057836	chr2:63050801-63057836	1	+	63052990	63056316	789624	5	96,69,208,152,2336,	0,447,2078,3245,4699,
#Deleted in new
chr2	63050829	63051804	chr2:63050829-63051804	0	+	63050829	63050829	8553170	2	68,556,	0,419,
#Deleted in new
chr2	63050830	63056583	chr2:63050830-63056583	0	+	63052990	63054140	789624	5	67,69,208,267,1083,	0,418,2049,3101,4670,
#Deleted in new
chr2	63050850	63052207	chr2:63050850-63052207	0	+	63050850	63050850	8553170	3	47,69,448,	0,398,909,
#Partially deleted in new
chr2	63083007	63087322	chr2:63083007-63087322	7	+	63083007	63083007	16724991	2	340,1012,	0,3303,
#Deleted in new
chr2	63108117	63108429	chr2:63108117-63108429	7	-	63108117	63108117	16724991	1	312,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	63117850	63119542	chr2:63117850-63119542	7	-	63117850	63117850	16724991	1	1692,	0,
#Deleted in new
chr2	63119010	63119263	chr2:63119010-63119263	5	-	63119010	63119010	16724991	1	253,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr2	63121382	63588799	chr2:63121382-63588799	3	-	63122005	63588271	789624	18	674,32,80,163,103,64,124,189,610,192,134,115,60,71,45,48,85,603,	0,31531,32112,53287,137924,191865,257003,260523,282665,312362,316038,318374,363221,363534,365159,366064,371473,466814,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	63121382	63433930	chr2:63121382-63433930	0	-	63174796	63433930	789624	9	674,32,80,163,64,124,189,610,186,	0,31531,32112,53287,191865,257003,260523,282665,312362,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	63121401	63477934	chr2:63121401-63477934	1	-	63122005	63437477	789624	12	655,32,80,163,103,64,124,189,610,192,134,120,	0,31512,32093,53268,137905,191846,256984,260504,282646,312343,316019,356413,
#Partially deleted in new
chr2	63121733	63153114	chr2:63121733-63153114	0	-	63121733	63121733	8553170	2	323,201,	0,31180,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	63121813	63443230	chr2:63121813-63443230	1	-	63122005	63437477	789624	12	243,32,80,163,103,64,124,189,610,192,134,3474,	0,31100,31681,52856,137493,191434,256572,260092,282234,311931,315607,317943,
#Partially deleted in new
chr2	63121830	63438007	chr2:63121830-63438007	1	-	63122005	63437883	789624	12	226,32,80,163,103,64,124,189,610,192,134,146,	0,31083,31664,52839,137476,191417,256555,260075,282217,311914,315590,316031,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	63168599	63168847	chr2:63168599-63168847	3	+	63168599	63168599	8553170	1	248,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	63228387	63588518	chr2:63228387-63588518	1	-	63229827	63588271	789624	14	1485,64,124,189,610,192,134,115,60,71,45,48,85,322,	0,84860,149998,153518,175660,205357,209033,211369,256216,256529,258154,259059,264468,359809,
#Deleted in new
chr2	63232452	63233577	chr2:63232452-63233577	7	-	63232452	63232452	16724991	1	1125,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	63359794	63588518	chr2:63359794-63588518	0	-	63359794	63359794	8553170	13	282,124,189,610,192,134,115,60,71,45,48,85,322,	0,18591,22111,44253,73950,77626,79962,124809,125122,126747,127652,133061,228402,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	63368822	63588518	chr2:63368822-63588518	0	-	63571560	63588271	789624	14	636,124,189,610,192,134,115,60,71,45,48,85,252,322,	0,9563,13083,35225,64922,68598,70934,115781,116094,117719,118624,124033,202552,219374,
#Partially deleted in new
chr2	63377848	63382074	chr2:63377848-63382074	0	-	63377848	63377848	8553170	2	661,169,	0,4057,
#Partially deleted in new
chr2	63403708	63484689	chr2:63403708-63484689	0	-	63403708	63403708	8553170	5	949,192,134,115,86,	0,30036,33712,36048,80895,
#Partially deleted in new
chr2	63437452	63441043	chr2:63437452-63441043	0	-	63437452	63437477	789624	3	102,99,333,	0,2304,3258,
#Partially deleted in new
chr2	63437456	63588266	chr2:63437456-63588266	0	-	63439837	63588266	789624	8	98,99,60,71,45,48,85,70,	0,2300,47147,47460,49085,49990,55399,150740,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	63484603	63827843	chr2:63484603-63827843	0	-	63484603	63484603	8553170	8	60,71,48,85,180,95,86,222,	0,313,2843,8252,166055,226893,329018,343018,
#Partially deleted in new
chr2	63484941	63588799	chr2:63484941-63588799	0	-	63484941	63588271	789624	4	46,48,85,603,	0,2505,7914,103255,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	63487471	63827843	chr2:63487471-63827843	0	-	63487471	63487471	8553170	5	23,85,180,86,222,	0,5384,163187,326150,340150,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	63517891	63519268	chr2:63517891-63519268	3	-	63517891	63517891	8553170	1	1377,	0,
#Partially deleted in new
chr2	63564174	63588500	chr2:63564174-63588500	0	-	63564174	63564174	8553170	2	450,304,	0,24022,
#Partially deleted in new
chr2	63588608	63607197	chr2:63588608-63607197	3	+	63589043	63606987	789624	9	438,99,97,176,123,177,114,90,336,	0,5879,6814,8790,10561,16087,16671,17330,18253,
#Partially deleted in new
chr2	63588608	63597657	chr2:63588608-63597657	0	+	63588608	63588608	8553170	4	438,99,97,259,	0,5879,6814,8790,
#Partially deleted in new
chr2	63588957	63607091	chr2:63588957-63607091	1	+	63589043	63606987	789624	5	89,177,114,90,230,	0,15738,16322,16981,17904,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	63588962	63595519	chr2:63588962-63595519	0	+	63593622	63595519	789624	4	84,505,99,97,	0,4161,5525,6460,
#Partially deleted in new
chr2	63588972	63607091	chr2:63588972-63607091	1	+	63589043	63606987	789624	6	74,123,177,114,90,230,	0,10197,15723,16307,16966,17889,
#Partially deleted in new
chr2	63588978	63594990	chr2:63588978-63594990	0	+	63588978	63588978	8553170	2	68,503,	0,5509,
#Partially deleted in new
chr2	63588981	63599288	chr2:63588981-63599288	0	+	63595455	63599288	789624	6	65,124,99,97,176,119,	0,979,5506,6441,8417,10188,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	63588984	63590974	chr2:63588984-63590974	0	+	63588984	63588984	8553170	2	62,572,	0,1418,
#Partially deleted in new
chr2	63588996	63597538	chr2:63588996-63597538	0	+	63593622	63597538	789624	5	50,189,99,97,140,	0,4443,5491,6426,8402,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	63588997	63598186	chr2:63588997-63598186	0	+	63588997	63588997	8553170	3	49,99,788,	0,5490,8401,
#Partially deleted in new
chr2	63589150	63604810	chr2:63589150-63604810	0	+	63589327	63604810	789624	6	234,99,97,176,123,115,	0,5337,6272,8248,10019,15545,
#Partially deleted in new
chr2	63589150	63607194	chr2:63589150-63607194	1	+	63589327	63606987	789624	9	234,99,97,176,123,177,114,90,333,	0,5337,6272,8248,10019,15545,16129,16788,17711,
#Partially deleted in new
chr2	63589150	63607194	chr2:63589150-63607194	1	+	63597466	63606987	789624	8	234,99,176,123,177,114,90,333,	0,5337,8248,10019,15545,16129,16788,17711,
#Partially deleted in new
chr2	63589324	63604810	chr2:63589324-63604810	0	+	63589327	63597506	789624	5	60,99,176,123,115,	0,5163,8074,9845,15371,
#Partially deleted in new
chr2	63597547	63600052	chr2:63597547-63600052	0	+	63597547	63597547	8553170	2	27,883,	0,1622,
#Partially deleted in new
chr2	63605809	63607194	chr2:63605809-63607194	0	+	63605809	63605809	8553170	2	219,333,	0,1052,
#Partially deleted in new
chr2	63622177	63622831	chr2:63622177-63622831	7	-	63622177	63622177	16724991	1	654,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	63642454	63643788	chr2:63642454-63643788	7	-	63642454	63642454	16724991	1	1334,	0,
#Partially deleted in new
chr2	63643270	63644038	chr2:63643270-63644038	5	-	63643270	63643270	16724991	1	768,	0,
#Deleted in new
chr2	63684304	63684710	chr2:63684304-63684710	7	+	63684304	63684304	16724991	1	406,	0,
#Deleted in new
chr2	63717121	63717899	chr2:63717121-63717899	7	+	63717121	63717121	16724991	1	778,	0,
#Deleted in new
chr2	63751696	63752630	chr2:63751696-63752630	7	-	63751696	63751696	16724991	1	934,	0,
#Partially deleted in new
chr2	63840939	63891562	chr2:63840939-63891562	1	+	63856319	63891227	0	10	293,128,108,186,134,298,198,243,105,443,	0,15366,16889,41526,43020,44649,45401,46462,49141,50180,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	63840951	63884110	chr2:63840951-63884110	0	+	63856319	63857594	789624	6	281,128,169,108,186,151,	0,15354,16598,16877,41514,43008,
#Partially deleted in new
chr2	63840953	63856433	chr2:63840953-63856433	0	+	63842185	63856433	789624	3	279,146,128,	0,1105,15352,
#Partially deleted in new
chr2	63840968	63891451	chr2:63840968-63891451	1	+	63856319	63891227	0	11	264,61,128,108,186,134,298,198,243,105,332,	0,1570,15337,16860,41497,42991,44620,45372,46433,49112,50151,
#Partially deleted in new
chr2	63840968	63882557	chr2:63840968-63882557	0	+	63856319	63882557	789624	5	264,53,128,108,92,	0,13915,15337,16860,41497,
#Partially deleted in new
chr2	63840970	63882601	chr2:63840970-63882601	0	+	63856319	63862849	789624	5	262,128,108,88,136,	0,15335,16858,21870,41495,
#Partially deleted in new
chr2	63840992	63882720	chr2:63840992-63882720	0	+	63840992	63840992	8553170	2	240,255,	0,41473,
#Partially deleted in new
chr2	63841003	63882503	chr2:63841003-63882503	0	+	63856319	63856820	789624	5	229,128,95,108,38,	0,15302,15784,16825,41462,
#Partially deleted in new
chr2	63841007	63886512	chr2:63841007-63886512	0	+	63841007	63841007	8553170	5	225,186,134,298,172,	0,41458,42952,44581,45333,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	63841009	63882606	chr2:63841009-63882606	0	+	63856319	63856820	789624	6	223,128,95,169,108,141,	0,15296,15778,16540,16819,41456,
#Partially deleted in new
chr2	63841042	63882607	chr2:63841042-63882607	0	+	63856319	63862849	789624	6	190,61,128,108,88,142,	0,1496,15263,16786,21798,41423,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	63841131	63862900	chr2:63841131-63862900	0	+	63856319	63857594	789624	5	101,128,169,108,60,	0,15174,16418,16697,21709,
#Partially deleted in new
chr2	63841709	63891562	chr2:63841709-63891562	3	+	63842185	63891227	0	10	495,128,108,186,134,298,198,243,105,443,	0,14596,16119,40756,42250,43879,44631,45692,48371,49410,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	63841850	63891562	chr2:63841850-63891562	0	+	63841850	63841850	8553170	7	354,186,134,298,198,2784,443,	0,40615,42109,43738,44490,45551,49269,
#Partially deleted in new
chr2	63841901	63882649	chr2:63841901-63882649	0	+	63856319	63882649	789624	5	303,61,128,108,184,	0,637,14404,15927,40564,
#Partially deleted in new
chr2	63842101	63856820	chr2:63842101-63856820	1	+	63856319	63856820	789624	3	103,128,33,	0,14204,14686,
#Partially deleted in new
chr2	63842105	63884067	chr2:63842105-63884067	0	+	63842185	63884067	789624	5	99,104,108,186,108,	0,14224,15723,40360,41854,
#Partially deleted in new
chr2	63842324	63891561	chr2:63842324-63891561	1	+	63842391	63891227	789624	10	113,128,108,186,134,298,198,243,105,442,	0,13981,15504,40141,41635,43264,44016,45077,47756,48795,
#Partially deleted in new
chr2	63842380	63883984	chr2:63842380-63883984	0	+	63842391	63856312	789624	6	57,61,128,108,186,25,	0,158,13925,15448,40085,41579,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	63842415	63884032	chr2:63842415-63884032	0	+	63842415	63856312	789624	7	22,61,128,169,108,186,73,	0,123,13890,15134,15413,40050,41544,
#Partially deleted in new
chr2	63842437	63884063	chr2:63842437-63884063	0	+	63856319	63884063	789624	5	34,128,108,186,104,	0,13868,15391,40028,41522,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	63842440	63885721	chr2:63842440-63885721	0	+	63856319	63857594	789624	7	31,128,169,108,186,134,133,	0,13865,15109,15388,40025,41519,43148,
#Partially deleted in new
chr2	63846073	63885684	chr2:63846073-63885684	0	+	63856319	63885684	789624	6	101,128,108,186,134,96,	0,10232,11755,36392,37886,39515,
#Partially deleted in new
chr2	63854844	63884003	chr2:63854844-63884003	0	+	63856319	63884003	789624	5	92,128,108,186,44,	0,1461,2984,27621,29115,
#Partially deleted in new
chr2	63855908	63857971	chr2:63855908-63857971	0	+	63855908	63855908	8553170	2	525,143,	0,1920,
#Partially deleted in new
chr2	63856253	63882758	chr2:63856253-63882758	0	+	63856253	63856253	8553170	3	180,108,293,	0,1575,26212,
#Partially deleted in new
chr2	63856763	63884018	chr2:63856763-63884018	0	+	63856763	63856763	8553170	4	119,108,186,59,	0,1065,25702,27196,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	63883248	63883391	chr2:63883248-63883391	3	-	63883248	63883248	8553170	1	143,	0,
#Partially deleted in new
chr2	63892145	64019072	chr2:63892145-64019072	1	-	63893429	63983999	789624	23	1390,95,108,81,122,88,106,64,113,182,130,341,97,56,108,127,386,132,35,79,206,156,135,	0,5350,7328,20199,20394,21077,22036,24754,27737,28300,29060,41527,50319,52454,55237,56891,69912,73689,76811,80020,89500,91718,126792,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr2	63892900	63975602	chr2:63892900-63975602	1	-	63893429	63975012	789624	20	635,95,108,81,122,88,106,64,113,182,130,341,97,56,127,386,132,35,79,617,	0,4595,6573,19444,19639,20322,21281,23999,26982,27545,28305,40772,49564,51699,56136,69157,72934,76056,79265,82085,
#Partially deleted in new
chr2	63893055	64019072	chr2:63893055-64019072	3	-	63893429	63983999	789624	23	480,95,108,81,122,88,106,64,113,182,130,341,97,56,108,127,386,132,35,79,242,156,135,	0,4440,6418,19289,19484,20167,21126,23844,26827,27390,28150,40617,49409,51544,54327,55981,69002,72779,75901,79110,88590,90808,125882,
#Partially deleted in new
chr2	63893071	63919930	chr2:63893071-63919930	0	-	63913898	63919930	789624	10	464,95,108,81,122,88,101,106,64,48,	0,4424,6402,19273,19468,20151,20753,21110,23828,26811,
#Partially deleted in new
chr2	64086352	64088246	chr2:64086352-64088246	3	-	64086352	64086352	8553170	2	170,390,	0,1504,
#Partially deleted in new
chr2	64092651	64144454	chr2:64092651-64144454	3	-	64094701	64108310	789624	7	2617,189,198,102,130,140,374,	0,3473,3761,7746,12049,15588,51429,
#Partially deleted in new
chr2	64100397	64144362	chr2:64100397-64144362	0	-	64100397	64100397	8553170	5	102,44,130,140,282,	0,4156,4303,7842,43683,
#Partially deleted in new
chr2	64106177	64144420	chr2:64106177-64144420	0	-	64106177	64106177	8553170	3	122,140,340,	0,2062,37903,
#Partially deleted in new
chr2	64108351	64144396	chr2:64108351-64144396	0	-	64108351	64108351	8553170	3	28,209,316,	0,34966,35729,
#Partially deleted in new
chr2	64143238	64229605	chr2:64143238-64229605	3	+	64143238	64143238	8553170	6	108,147,74,68,46,109,	0,58509,63733,71228,83208,86258,
#Partially deleted in new
chr2	64185077	64205485	chr2:64185077-64205485	3	-	64185077	64185077	5263520	6	665,116,103,131,96,2196,	0,3939,7278,16150,17915,18212,
#Partially deleted in new
chr2	64186389	64204493	chr2:64186389-64204493	0	-	64186389	64186389	8553170	5	485,116,131,86,116,	0,2627,14838,16372,17988,
#Partially deleted in new
chr2	64206974	64251355	chr2:64206974-64251355	0	+	64206974	64206974	8553170	4	71,46,144,237,	0,19472,22522,44144,
#Deleted in new
chr2	64208497	64208716	chr2:64208497-64208716	7	-	64208497	64208497	16724991	1	219,	0,
#Partially deleted in new
chr2	64227860	64251344	chr2:64227860-64251344	0	+	64227860	64227860	8553170	3	128,144,226,	0,1636,23258,
#Partially deleted in new
chr2	64228422	64251938	chr2:64228422-64251938	0	+	64228422	64228422	789624	4	100,144,219,138,	0,1074,22696,23378,
#Deleted in new
chr2	64330485	64332131	chr2:64330485-64332131	3	-	64330485	64330485	8553170	2	182,107,	0,1539,
#Partially deleted in new
chr2	64338066	64341647	chr2:64338066-64341647	3	-	64338066	64338066	8553170	2	291,113,	0,3468,
#Deleted in new
chr2	64340746	64340848	chr2:64340746-64340848	3	-	64340746	64340746	5263520	1	102,	0,
#Deleted in new
chr2	64340758	64340839	chr2:64340758-64340839	3	+	64340758	64340758	5263520	1	81,	0,
#Deleted in new
chr2	64347192	64347741	chr2:64347192-64347741	7	-	64347192	64347192	16724991	1	549,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	64395219	64453798	chr2:64395219-64453798	3	-	64395219	64395219	8553170	4	446,99,72,106,	0,3056,44683,58473,
#Partially deleted in new
chr2	64395515	64453897	chr2:64395515-64453897	0	-	64395515	64395515	8553170	4	150,99,73,205,	0,2760,24712,58177,
#Deleted in new
chr2	64450095	64450524	chr2:64450095-64450524	7	+	64450095	64450095	16724991	1	429,	0,
#Deleted in new
chr2	64453968	64456465	chr2:64453968-64456465	0	+	64454545	64456465	789624	5	57,211,72,89,178,	0,402,1375,1620,2319,
#Partially deleted in new
chr2	64454091	64461381	chr2:64454091-64461381	3	+	64454545	64458428	0	5	490,72,89,178,3097,	0,1252,1497,2196,4193,
#Partially deleted in new
chr2	64454446	64458440	chr2:64454446-64458440	0	+	64454545	64456413	789624	3	135,178,156,	0,1841,3838,
#Partially deleted in new
chr2	64454520	64458412	chr2:64454520-64458412	0	+	64454545	64456304	789624	5	61,72,89,198,128,	0,823,1068,1747,3764,
#Partially deleted in new
chr2	64454541	64461381	chr2:64454541-64461381	1	+	64454545	64458390	789624	4	40,72,89,3097,	0,802,1047,3743,
#Partially deleted in new
chr2	64486352	64500904	chr2:64486352-64500904	3	+	64486352	64486352	789624	3	78,108,386,	0,2382,14166,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	64522186	64524093	chr2:64522186-64524093	3	-	64522186	64522186	789624	1	1907,	0,
#Partially deleted in new
chr2	64524304	64592997	chr2:64524304-64592997	1	+	64551474	64592035	789624	10	308,1967,152,127,57,123,61,84,124,1110,	0,27138,43257,44787,45318,48641,55181,56885,61117,67583,
#Partially deleted in new
chr2	64524304	64593005	chr2:64524304-64593005	3	+	64551474	64592035	789624	9	308,1967,152,127,57,123,61,124,1121,	0,27138,43257,44787,45318,48641,55181,61117,67580,
#Partially deleted in new
chr2	64524526	64592134	chr2:64524526-64592134	0	+	64524526	64524526	8553170	9	86,1967,152,127,57,123,1788,124,250,	0,26916,43035,44565,45096,48419,54959,60895,67358,
#Deleted in new
chr2	64525512	64525565	chr2:64525512-64525565	3	+	64525512	64525512	5263520	1	53,	0,
#Partially deleted in new
chr2	64551474	64592035	chr2:64551474-64592035	1	+	64551474	64592035	789624	9	1935,152,127,57,123,61,84,124,148,	0,16087,17617,18148,21471,28011,29715,33947,40413,
#Partially deleted in new
chr2	64552511	64592132	chr2:64552511-64592132	0	+	64552511	64592035	789624	9	898,152,127,57,123,61,84,124,248,	0,15050,16580,17111,20434,26974,28678,32910,39373,
#Partially deleted in new
chr2	64552875	64591896	chr2:64552875-64591896	0	+	64552875	64585448	789624	4	534,123,124,12,	0,20070,32546,39009,
#Partially deleted in new
chr2	64569172	64593002	chr2:64569172-64593002	1	+	64569661	64591979	789624	7	46,57,123,61,124,88,1026,	0,450,3773,10313,16249,22715,22804,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	64578891	64578997	chr2:64578891-64578997	3	+	64578891	64578891	8553170	1	106,	0,
#Partially deleted in new
chr2	64606974	64615999	chr2:64606974-64615999	0	+	64606974	64606974	8553170	4	207,320,113,746,	0,5791,6203,8279,
#Partially deleted in new
chr2	64607360	64616482	chr2:64607360-64616482	3	+	64607360	64607360	789624	4	60,320,113,1229,	0,5405,5817,7893,
#Partially deleted in new
chr2	64631620	64653913	chr2:64631620-64653913	3	-	64635926	64636871	789624	2	5255,294,	0,21999,
#Partially deleted in new
chr2	64636532	64751005	chr2:64636532-64751005	0	-	64636532	64636532	8553170	2	343,725,	0,113748,
#Deleted in new
chr2	64644611	64646698	chr2:64644611-64646698	3	+	64644611	64644611	8553170	2	353,274,	0,1813,
#Deleted in new
chr2	64665606	64666064	chr2:64665606-64666064	7	+	64665606	64665606	16724991	1	458,	0,
#Deleted in new
chr2	64750577	64750895	chr2:64750577-64750895	0	-	64750577	64750577	8553170	1	318,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	64817377	64817675	chr2:64817377-64817675	3	+	64817377	64817377	8553170	1	298,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	64834055	64834157	chr2:64834055-64834157	3	-	64834055	64834055	8553170	1	102,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	64846129	64863626	chr2:64846129-64863626	3	-	64846129	64846129	789624	5	1483,81,92,108,213,	0,1667,2142,3310,17284,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	64901839	64905137	chr2:64901839-64905137	3	-	64901839	64901839	789624	2	2781,147,	0,3151,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	64906862	64907138	chr2:64906862-64907138	3	-	64906862	64906862	8553170	1	276,	0,
#Deleted in new
chr2	64960052	64960634	chr2:64960052-64960634	7	-	64960052	64960052	16724991	1	582,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	64988476	65016554	chr2:64988476-65016554	0	+	64988476	64988476	8553170	6	144,43,63,167,234,115,	0,12971,15476,22120,22835,27963,
#Partially deleted in new
chr2	64988489	65018127	chr2:64988489-65018127	0	+	64988489	64988489	8553170	5	131,43,63,167,57,	0,12958,15463,22107,29581,
#Partially deleted in new
chr2	64988489	65021394	chr2:64988489-65021394	1	+	65010623	65021146	789624	7	131,43,63,167,195,135,483,	0,12958,15463,22107,29581,30055,32422,
#Partially deleted in new
chr2	64989400	65023865	chr2:64989400-65023865	3	+	64989643	65021146	789624	8	770,43,63,167,234,195,135,2954,	0,12047,14552,21196,27039,28670,29144,31511,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	64994745	64994860	chr2:64994745-64994860	3	+	64994745	64994745	8553170	1	115,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	64999447	65023863	chr2:64999447-65023863	0	+	64999447	64999447	8553170	7	2043,63,167,234,195,135,2952,	0,4505,11149,16992,18623,19097,21464,
#Partially deleted in new
chr2	65030726	65037497	chr2:65030726-65037497	0	+	65030726	65030726	8553170	3	86,314,95,	0,219,6676,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	65030746	65053017	chr2:65030746-65053017	3	+	65030746	65030746	8553170	3	66,314,638,	0,199,21633,
#Partially deleted in new
chr2	65056365	65071844	chr2:65056365-65071844	0	+	65056365	65056365	8553170	2	159,391,	0,15088,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	65056371	65087004	chr2:65056371-65087004	3	+	65069444	65082705	789624	7	157,403,1527,123,97,174,3366,	0,13027,15082,17910,21496,26164,27267,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	65056451	65075251	chr2:65056451-65075251	1	+	65072260	65073145	789624	3	73,2725,970,	0,15002,17830,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	65056464	65087004	chr2:65056464-65087004	1	+	65069444	65082705	789624	7	64,403,1116,123,97,174,3366,	0,12934,14989,17817,21403,26071,27174,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	65070695	65130331	chr2:65070695-65130331	0	-	65088492	65129915	8553170	8	509,131,322,132,96,96,73,439,	0,14813,17673,18243,20287,27275,34038,59197,
#Partially deleted in new
chr2	65070700	65130086	chr2:65070700-65130086	0	-	65070700	65070700	8553170	3	504,73,194,	0,34033,59192,
#Partially deleted in new
chr2	65070728	65074484	chr2:65070728-65074484	0	+	65070728	65070728	8553170	4	1841,97,214,203,	0,2155,3207,3553,
#Partially deleted in new
chr2	65086854	65130106	chr2:65086854-65130106	3	-	65088492	65129915	0	6	1836,132,96,96,73,214,	0,2084,4128,11116,17879,43038,
#Partially deleted in new
chr2	65086854	65130105	chr2:65086854-65130105	1	-	65088492	65129915	0	4	1836,132,73,213,	0,2084,17879,43038,
#Partially deleted in new
chr2	65087870	65130101	chr2:65087870-65130101	1	-	65088492	65129915	0	4	820,96,73,209,	0,10100,16863,42022,
#Partially deleted in new
chr2	65087870	65130104	chr2:65087870-65130104	1	-	65088492	65129915	789624	5	820,132,96,73,212,	0,1068,3112,16863,42022,
#Deleted in new
chr2	65158661	65158860	chr2:65158661-65158860	3	+	65158661	65158661	8553170	1	199,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	65203501	65227605	chr2:65203501-65227605	7	-	65203501	65203501	16724991	4	1811,118,74,121,	0,3577,18965,23983,
#Deleted in new
chr2	65203570	65203813	chr2:65203570-65203813	5	-	65203570	65203570	16724991	1	243,	0,
#Deleted in new
chr2	65205107	65205988	chr2:65205107-65205988	7	+	65205107	65205107	16724991	1	881,	0,
#Partially deleted in new
chr2	65227752	65271253	chr2:65227752-65271253	3	+	65227909	65268734	789624	9	205,111,216,73,137,150,146,133,2690,	0,12099,18771,23274,25975,27792,33494,37290,40811,
#Partially deleted in new
chr2	65227787	65246737	chr2:65227787-65246737	0	+	65227909	65241974	789624	4	170,111,92,214,	0,12064,14184,18736,
#Partially deleted in new
chr2	65227832	65246718	chr2:65227832-65246718	0	+	65227909	65246223	789624	4	125,111,123,195,	0,12019,18352,18691,
#Partially deleted in new
chr2	65227836	65270146	chr2:65227836-65270146	1	+	65227909	65268734	789624	10	121,111,15,216,73,137,150,146,133,1583,	0,12015,14212,18687,23190,25891,27708,33410,37206,40727,
#Partially deleted in new
chr2	65228175	65268755	chr2:65228175-65268755	1	+	65246529	65268734	789624	9	271,111,216,73,137,150,146,133,192,	0,11676,18348,22851,25552,27369,33071,36867,40388,
#Partially deleted in new
chr2	65310850	65432177	chr2:65310850-65432177	3	-	65313500	65431987	0	6	3319,150,65,169,178,216,	0,5883,21136,23754,33868,121111,
#Partially deleted in new
chr2	65312992	65366650	chr2:65312992-65366650	1	-	65313500	65366606	0	6	1177,150,65,169,178,61,	0,3741,18994,21612,31726,53597,
#Partially deleted in new
chr2	65313504	65377750	chr2:65313504-65377750	0	-	65313504	65377683	789624	6	665,150,65,169,178,138,	0,3229,18482,21100,31214,64108,
#Partially deleted in new
chr2	65313702	65334773	chr2:65313702-65334773	0	-	65313702	65334773	789624	3	467,65,169,	0,18284,20902,
#Partially deleted in new
chr2	65316733	65366752	chr2:65316733-65366752	0	-	65316733	65316733	8553170	6	150,65,151,169,178,163,	0,15253,17381,17871,27985,49856,
#Partially deleted in new
chr2	65332203	65344799	chr2:65332203-65344799	0	-	65334203	65344799	789624	4	97,151,169,81,	0,1911,2401,12515,
#Partially deleted in new
chr2	65334628	65432637	chr2:65334628-65432637	0	-	65334628	65431987	789624	4	145,178,123,109,	0,10090,97333,97900,
#Deleted in new
chr2	65344195	65344786	chr2:65344195-65344786	0	-	65344519	65344786	789624	2	399,68,	0,523,
#Partially deleted in new
chr2	65373699	65380685	chr2:65373699-65380685	3	-	65373699	65373699	8553170	4	137,150,183,60,	0,276,4247,6926,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	65439887	65456512	chr2:65439887-65456512	1	-	65439887	65439887	8553170	4	198,573,101,208,	0,2041,15772,16417,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	65442054	65456328	chr2:65442054-65456328	1	-	65442054	65442054	8553170	4	447,527,101,24,	0,8178,13605,14250,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	65442155	65455681	chr2:65442155-65455681	2	-	65442155	65442155	8553170	3	346,284,22,	0,8320,13504,
#Partially deleted in new
chr2	65450073	65456571	chr2:65450073-65456571	0	-	65450073	65450073	8553170	3	686,101,267,	0,5586,6231,
#Partially deleted in new
chr2	65450073	65456551	chr2:65450073-65456551	1	-	65450073	65450073	8553170	3	686,101,533,	0,5586,5945,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	65450516	65456543	chr2:65450516-65456543	0	-	65450516	65450516	8553170	4	243,100,101,239,	0,3366,5143,5788,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	65450516	65455923	chr2:65450516-65455923	0	-	65450516	65450516	8553170	3	243,100,412,	0,3366,4995,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	65450516	65456306	chr2:65450516-65456306	0	-	65450516	65450516	8553170	4	243,100,101,288,	0,3366,5143,5502,
#Partially deleted in new
chr2	65450589	65456508	chr2:65450589-65456508	0	-	65450589	65450589	8553170	4	170,101,78,204,	0,5070,5429,5715,
#Partially deleted in new
chr2	65500992	65502138	chr2:65500992-65502138	7	-	65500992	65500992	16724991	2	334,459,	0,687,
#Deleted in new
chr2	65511770	65512076	chr2:65511770-65512076	7	-	65511770	65511770	16724991	1	306,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	65545400	65545696	chr2:65545400-65545696	3	-	65545400	65545400	8553170	1	296,	0,
#Deleted in new
chr2	65555431	65555534	chr2:65555431-65555534	3	-	65555431	65555431	8553170	1	103,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	65589565	65640177	chr2:65589565-65640177	3	-	65589565	65589565	8553170	4	254,133,1206,63,	0,1339,11591,50549,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	65623271	65628424	chr2:65623271-65628424	3	+	65623271	65623271	8553170	3	236,246,262,	0,961,4891,
#Deleted in new
chr2	65666694	65667737	chr2:65666694-65667737	7	+	65666694	65666694	16724991	1	1043,	0,
#Partially deleted in new
chr2	65732892	65754911	chr2:65732892-65754911	0	+	65732892	65732892	8553170	4	64,150,111,163,	0,347,980,21856,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	65790038	65793533	chr2:65790038-65793533	3	+	65790038	65790038	8553170	1	3495,	0,
#Partially deleted in new
chr2	65897621	65899515	chr2:65897621-65899515	0	+	65897621	65897621	8553170	2	102,324,	0,1570,
#Partially deleted in new
chr2	65921928	66084639	chr2:65921928-66084639	0	+	65921928	65921928	8553170	3	141,149,130,	0,150575,162581,
#Partially deleted in new
chr2	66078457	66084638	chr2:66078457-66084638	1	+	66078457	66078457	8553170	3	270,113,129,	0,2832,6052,
#Deleted in new
chr2	66235376	66236213	chr2:66235376-66236213	3	-	66235376	66235376	8553170	2	279,87,	0,750,
#Deleted in new
chr2	66327348	66328643	chr2:66327348-66328643	0	+	66327348	66327348	8553170	2	42,982,	0,313,
#Deleted in new
chr2	66327360	66328984	chr2:66327360-66328984	3	+	66327360	66327360	8553170	3	30,671,204,	0,301,1420,
#Deleted in new
chr2	66358248	66358328	chr2:66358248-66358328	3	-	66358248	66358248	5263520	1	80,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	66383305	66392450	chr2:66383305-66392450	3	+	66383305	66383305	789624	3	44,97,1538,	0,6093,7607,
#Deleted in new
chr2	66426734	66433470	chr2:66426734-66433470	3	-	66426734	66426734	789624	4	428,19,80,180,	0,5085,5196,6556,
#Deleted in new
chr2	66433451	66439967	chr2:66433451-66439967	0	+	66433451	66433451	8553170	3	116,227,125,	0,4285,6391,
#Partially deleted in new
chr2	66435132	66568536	chr2:66435132-66568536	1	+	66435856	66567600	789624	10	736,227,142,51,51,147,112,146,77,1084,	0,2604,4710,5429,6281,7769,28976,77016,112810,132320,
#Deleted in new
chr2	66435168	66443772	chr2:66435168-66443772	0	+	66435168	66435168	8553170	5	700,227,51,51,871,	0,2568,5393,6245,7733,
#Partially deleted in new
chr2	66435399	66573869	chr2:66435399-66573869	3	+	66435856	66569108	0	13	469,227,142,51,51,147,112,146,77,59,90,96,2624,	0,2337,4443,5162,6014,7502,28709,76749,112543,132053,133267,133650,135846,
#Partially deleted in new
chr2	66435557	66572454	chr2:66435557-66572454	1	+	66435856	66568779	789624	11	311,227,142,51,51,147,112,146,77,59,3788,	0,2179,4285,5004,5856,7344,28551,76591,112385,131895,133109,
#Deleted in new
chr2	66436916	66441440	chr2:66436916-66441440	0	+	66436916	66436916	8553170	5	27,227,142,51,27,	0,820,2926,3645,4497,
#Partially deleted in new
chr2	66437392	66573329	chr2:66437392-66573329	1	+	66437730	66571529	0	11	571,142,51,51,147,112,146,77,59,90,2084,	0,2450,3169,4021,5509,26716,74756,110550,130060,131274,133853,
#Deleted in new
chr2	66439087	66440312	chr2:66439087-66440312	1	-	66439087	66439087	789624	2	602,88,	0,1137,
#Partially deleted in new
chr2	66439320	66572759	chr2:66439320-66572759	1	+	66439627	66569108	789624	12	351,142,51,51,147,112,146,77,59,90,96,1514,	0,522,1241,2093,3581,24788,72828,108622,128132,129346,129729,131925,
#Deleted in new
chr2	66439442	66441836	chr2:66439442-66441836	3	-	66439442	66439442	8553170	2	247,339,	0,2055,
#Partially deleted in new
chr2	66440096	66512191	chr2:66440096-66512191	0	+	66440096	66440096	8553170	4	249,147,112,43,	0,2805,24012,72052,
#Partially deleted in new
chr2	66440677	66464220	chr2:66440677-66464220	0	+	66440677	66464220	789624	4	53,51,147,112,	0,736,2224,23431,
#Deleted in new
chr2	66440706	66454735	chr2:66440706-66454735	0	+	66440706	66440706	8553170	4	301,51,147,27,	0,707,2195,14002,
#Partially deleted in new
chr2	66442774	66512294	chr2:66442774-66512294	0	+	66442774	66442774	8553170	3	274,112,146,	0,21334,69374,
#Partially deleted in new
chr2	66442964	66568714	chr2:66442964-66568714	0	+	66442964	66442964	8553170	7	84,112,146,77,38,59,48,	0,21144,69184,104978,119117,124488,125702,
#Partially deleted in new
chr2	66445192	66567500	chr2:66445192-66567500	0	+	66445192	66445192	8553170	6	104,86,112,146,77,48,	0,9516,18916,66956,102750,122260,
#Partially deleted in new
chr2	66461797	66572454	chr2:66461797-66572454	0	+	66461797	66461797	8553170	7	90,112,77,59,90,96,1209,	0,2311,86145,105655,106869,107252,109448,
#Partially deleted in new
chr2	66496025	66571251	chr2:66496025-66571251	0	+	66496025	66496025	8553170	6	175,146,77,59,90,6,	0,16123,51917,71427,72641,75220,
#Partially deleted in new
chr2	66508926	66568745	chr2:66508926-66568745	0	+	66508926	66508926	8553170	5	197,146,77,59,79,	0,3222,39016,58526,59740,
#Partially deleted in new
chr2	66574029	66695505	chr2:66574029-66695505	3	+	66574029	66574029	789624	6	136,97,30,64,52,303,	0,91691,101171,101728,117642,121173,
#Deleted in new
chr2	66689867	66695581	chr2:66689867-66695581	0	+	66689867	66689867	8553170	3	124,52,379,	0,1804,5335,
#Deleted in new
chr2	66691434	66695583	chr2:66691434-66695583	0	+	66691434	66691434	8553170	3	113,52,381,	0,237,3768,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	66691437	66715630	chr2:66691437-66715630	1	+	66691437	66691437	8553170	5	117,52,56,92,236,	0,234,6010,22012,23957,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	66691445	66730157	chr2:66691445-66730157	0	+	66691445	66691445	8553170	5	109,52,56,92,219,	0,226,6002,22004,38493,
#Deleted in new
chr2	66697124	66703227	chr2:66697124-66703227	3	-	66697124	66697124	789624	3	171,484,110,	0,2786,5993,
#Deleted in new
chr2	66697157	66703197	chr2:66697157-66703197	0	-	66697157	66697157	8553170	2	138,80,	0,5960,
#Deleted in new
chr2	66697161	66703197	chr2:66697161-66703197	0	-	66697161	66697161	789624	3	134,198,80,	0,2749,5956,
#Partially deleted in new
chr2	66820683	66822570	chr2:66820683-66822570	7	-	66820683	66820683	16724991	2	825,740,	0,1147,
#Deleted in new
chr2	66881086	66881222	chr2:66881086-66881222	7	-	66881086	66881086	16724991	1	136,	0,
#Partially deleted in new
chr2	66904435	66971462	chr2:66904435-66971462	3	+	66904435	66904435	789624	5	34,147,70,187,187,	0,28667,30467,40852,66840,
#Deleted in new
chr2	66921509	66922457	chr2:66921509-66922457	3	-	66921509	66921509	789624	3	183,58,156,	0,655,792,
#Partially deleted in new
chr2	66921693	66958920	chr2:66921693-66958920	1	+	66921693	66921693	8553170	3	66,187,133,	0,23594,37094,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	67040545	67041966	chr2:67040545-67041966	3	+	67040545	67040545	8553170	2	520,47,	0,1374,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	67086445	67298251	chr2:67086445-67298251	3	+	67086445	67086445	789624	6	110,196,155,63,342,2384,	0,178551,182038,201310,202637,209422,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	67087012	67257966	chr2:67087012-67257966	1	+	67087012	67087012	8553170	6	156,59,236,97,261,54,	0,34799,93975,142386,165615,170900,
#Partially deleted in new
chr2	67124669	67177992	chr2:67124669-67177992	0	-	67124669	67124669	8553170	3	194,145,411,	0,1576,52912,
#Partially deleted in new
chr2	67175422	67215277	chr2:67175422-67215277	1	-	67175422	67175422	8553170	5	277,131,58,55,50,	0,2159,27693,30086,39805,
#Partially deleted in new
chr2	67213407	67244574	chr2:67213407-67244574	1	+	67213407	67213407	789624	4	88,97,83,263,	0,15991,29871,30904,
#Partially deleted in new
chr2	67252617	67261170	chr2:67252617-67261170	0	+	67252617	67252617	8553170	4	271,62,78,204,	0,5295,7332,8349,
#Partially deleted in new
chr2	67260802	67296075	chr2:67260802-67296075	1	+	67260802	67260802	8553170	3	405,342,208,	0,28280,35065,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	67261065	67289370	chr2:67261065-67289370	0	+	67261065	67261065	8553170	5	142,196,61,63,288,	0,3931,7418,26690,28017,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	67261065	67311439	chr2:67261065-67311439	0	+	67261065	67261065	8553170	9	142,196,155,63,342,89,58,109,250,	0,3931,7418,26690,28017,34802,40423,48149,50124,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	67261086	67268840	chr2:67261086-67268840	0	+	67261086	67261086	8553170	3	121,196,357,	0,3910,7397,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	67261086	67267817	chr2:67261086-67267817	0	+	67261086	67261086	8553170	3	121,196,531,	0,3910,6200,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	67261086	67265338	chr2:67261086-67265338	0	+	67261086	67261086	8553170	2	121,342,	0,3910,
#Partially deleted in new
chr2	67261086	67289243	chr2:67261086-67289243	0	+	67261086	67261086	8553170	3	121,63,161,	0,26669,27996,
#Partially deleted in new
chr2	67261086	67289306	chr2:67261086-67289306	0	+	67261086	67261086	8553170	5	121,155,131,68,224,	0,7397,22302,26669,27996,
#Partially deleted in new
chr2	67261086	67296023	chr2:67261086-67296023	0	+	67261086	67261086	8553170	4	121,68,342,156,	0,26669,27996,34781,
#Deleted in new
chr2	67324626	67325304	chr2:67324626-67325304	3	+	67324626	67324626	8553170	2	349,225,	0,453,
#Partially deleted in new
chr2	67397318	67410545	chr2:67397318-67410545	1	+	67397448	67410038	789624	6	353,129,77,113,2111,635,	0,1850,2231,5543,5906,12592,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	67397321	67412089	chr2:67397321-67412089	2	+	67397448	67402866	789624	5	350,129,113,339,2179,	0,1847,5540,7675,12589,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	67397323	67412089	chr2:67397323-67412089	1	+	67397448	67405302	789624	6	348,129,77,113,100,2179,	0,1845,2226,5538,7912,12587,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	67397335	67412089	chr2:67397335-67412089	0	+	67397448	67399198	789624	6	336,125,77,2631,339,2179,	0,1837,2214,3008,7661,12575,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	67562066	67574044	chr2:67562066-67574044	3	+	67562066	67562066	8553170	6	181,134,197,149,99,248,	0,3510,4709,5941,7935,11730,
#Partially deleted in new
chr2	67565603	67684077	chr2:67565603-67684077	3	-	67565603	67565603	8553170	2	41,126,	0,118348,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	67796053	67825562	chr2:67796053-67825562	3	-	67796053	67796053	789624	3	545,106,74,	0,27820,29435,
#Deleted in new
chr2	68023693	68024766	chr2:68023693-68024766	7	-	68023693	68023693	16724991	2	896,43,	0,1030,
#Partially deleted in new
chr2	68041129	68062983	chr2:68041129-68062983	3	-	68042888	68047310	789624	5	1924,56,67,147,39,	0,4858,5214,6043,21815,
#Partially deleted in new
chr2	68042208	68062982	chr2:68042208-68062982	1	-	68042888	68053168	789624	6	845,56,67,147,226,38,	0,3779,4135,4964,10852,20736,
#Partially deleted in new
chr2	68042655	68063025	chr2:68042655-68063025	1	-	68042888	68047310	789624	5	398,56,67,147,68,	0,3332,3688,4517,20302,
#Partially deleted in new
chr2	68042676	68063009	chr2:68042676-68063009	1	-	68042888	68047310	789624	6	377,56,67,143,77,52,	0,3311,3667,4496,10384,20281,
#Partially deleted in new
chr2	68042713	68046568	chr2:68042713-68046568	0	-	68042713	68042713	8553170	3	340,56,225,	0,3274,3630,
#Partially deleted in new
chr2	68042831	68062994	chr2:68042831-68062994	0	-	68042831	68042831	8553170	4	222,423,147,50,	0,3156,4341,20113,
#Partially deleted in new
chr2	68047276	68110948	chr2:68047276-68110948	0	-	68047276	68047276	8553170	2	43,622,	0,63050,
#Deleted in new
chr2	68117025	68117200	chr2:68117025-68117200	7	+	68117025	68117025	16724991	1	175,	0,
#Partially deleted in new
chr2	68122935	68157546	chr2:68122935-68157546	0	-	68122935	68122935	8553170	10	76,179,169,98,135,116,102,131,101,173,	0,2269,8341,11766,14363,15806,18758,21649,24531,34438,
#Deleted in new
chr2	68125264	68125747	chr2:68125264-68125747	7	+	68125264	68125264	16724991	1	483,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	68129802	68157560	chr2:68129802-68157560	3	-	68131237	68157443	0	8	1643,98,135,116,102,131,101,300,	0,4899,7496,8939,11891,14782,17664,27458,
#Partially deleted in new
chr2	68131237	68261230	chr2:68131237-68261230	3	-	68157460	68217104	789624	15	208,98,135,116,102,131,101,434,327,185,60,177,40,150,42,	0,3464,6061,7504,10456,13347,16229,26023,26558,55230,56017,57276,85854,121750,129951,
#Partially deleted in new
chr2	68131759	68138785	chr2:68131759-68138785	0	-	68132004	68138785	789624	4	246,98,135,44,	0,2942,5539,6982,
#Partially deleted in new
chr2	68134083	68157473	chr2:68134083-68157473	1	-	68134700	68144696	789624	7	716,135,116,102,131,101,100,	0,3215,4658,7610,10501,13383,23290,
#Partially deleted in new
chr2	68134089	68157482	chr2:68134089-68157482	1	-	68134700	68157443	0	7	710,135,116,102,131,101,222,	0,3209,4652,7604,10495,13377,23171,
#Partially deleted in new
chr2	68147466	68157549	chr2:68147466-68157549	0	-	68147466	68147466	8553170	2	101,623,	0,9460,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	68157843	68176238	chr2:68157843-68176238	3	+	68157934	68174802	0	7	298,150,84,61,118,71,1504,	0,536,3839,4421,4702,15503,16891,
#Partially deleted in new
chr2	68157916	68162273	chr2:68157916-68162273	0	+	68157934	68161268	789624	5	225,150,148,84,9,	0,463,3298,3766,4348,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	68173106	68174964	chr2:68173106-68174964	0	+	68173106	68173106	8553170	2	311,230,	0,1628,
#Partially deleted in new
chr2	68178856	68252531	chr2:68178856-68252531	3	-	68180962	68252127	0	6	2154,185,60,177,40,407,	0,7611,8398,9657,38235,73268,
#Deleted in new
chr2	68179832	68180532	chr2:68179832-68180532	3	+	68179832	68179832	8553170	1	700,	0,
#Partially deleted in new
chr2	68180803	68256237	chr2:68180803-68256237	1	-	68180962	68256115	789624	6	207,185,60,177,40,182,	0,5664,6451,7710,36288,75252,
#Partially deleted in new
chr2	68180946	68251148	chr2:68180946-68251148	1	-	68180962	68217104	789624	6	64,185,60,177,40,158,	0,5521,6308,7567,36145,70044,
#Deleted in new
chr2	68252869	68253848	chr2:68252869-68253848	3	+	68252869	68252869	8553170	1	979,	0,
#Partially deleted in new
chr2	68284170	68319400	chr2:68284170-68319400	1	-	68284427	68319400	789624	3	314,151,179,	0,32986,35051,
#Partially deleted in new
chr2	68293009	68320006	chr2:68293009-68320006	3	-	68293861	68319400	789624	3	1017,151,785,	0,24147,26212,
#Partially deleted in new
chr2	68293065	68320051	chr2:68293065-68320051	0	-	68293065	68293065	8553170	4	961,151,101,280,	0,24091,26156,26706,
#Partially deleted in new
chr2	68315920	68319887	chr2:68315920-68319887	1	-	68317072	68319400	789624	3	1387,245,116,	0,3301,3851,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	68361213	68365584	chr2:68361213-68365584	3	-	68361213	68361213	8553170	2	1246,170,	0,4201,
#Partially deleted in new
chr2	68365172	68397453	chr2:68365172-68397453	3	+	68365351	68395816	0	9	221,156,182,92,185,105,84,70,1774,	0,15155,15550,17369,21329,23214,27989,28934,30507,
#Partially deleted in new
chr2	68387941	68395717	chr2:68387941-68395717	0	+	68387941	68387941	8553170	4	550,84,70,38,	0,5220,6165,7738,
#Partially deleted in new
chr2	68445709	68449174	chr2:68445709-68449174	7	-	68445709	68445709	16724991	3	86,348,1366,	0,1441,2099,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	68459418	68467258	chr2:68459418-68467258	3	-	68464208	68465145	789624	4	4952,339,327,48,	0,5421,6725,7792,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	68467560	68580162	chr2:68467560-68580162	3	+	68467731	68578022	0	10	267,72,173,148,133,182,356,126,47,2343,	0,22629,35170,45519,45987,58500,70311,77626,99780,110259,
#Partially deleted in new
chr2	68467571	68579257	chr2:68467571-68579257	0	+	68467731	68526064	789624	9	256,173,148,137,182,356,126,47,1438,	0,35159,45508,45976,58489,70300,77615,99769,110248,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	68467602	68580162	chr2:68467602-68580162	0	+	68467731	68535321	789624	11	225,72,173,148,133,182,101,356,126,47,2343,	0,22587,35128,45477,45945,58458,67680,70269,77584,99738,110217,
#Deleted in new
chr2	68528240	68529452	chr2:68528240-68529452	7	-	68528240	68528240	16724991	1	1212,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	68529637	68630724	chr2:68529637-68630724	0	+	68529637	68529637	8553170	11	91,82,356,126,47,115,184,207,142,149,134,	0,1710,8234,15549,37703,38598,48182,57134,58170,82461,100953,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	68586853	68655862	chr2:68586853-68655862	0	+	68586853	68586853	8553170	6	125,142,149,645,136,983,	0,954,25245,58808,62621,68026,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	68627879	68630872	chr2:68627879-68630872	0	+	68627879	68627879	8553170	2	351,282,	0,2711,
#Partially deleted in new
chr2	68643588	68658247	chr2:68643588-68658247	3	+	68645821	68655576	789624	3	260,645,3368,	0,2073,11291,
#Partially deleted in new
chr2	68645821	68655576	chr2:68645821-68655576	1	+	68645821	68655576	789624	2	485,697,	0,9058,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	68679845	68787922	chr2:68679845-68787922	0	+	68679845	68679845	8553170	6	250,194,93,200,88,83,	0,30659,77792,95375,102387,107994,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	68679961	68782286	chr2:68679961-68782286	0	+	68679961	68679961	8553170	4	134,194,200,54,	0,30543,95259,102271,
#Partially deleted in new
chr2	68734834	68826833	chr2:68734834-68826833	3	+	68735199	68826194	789624	11	426,200,88,117,208,133,74,122,197,533,847,	0,40386,47398,53005,72438,78452,81454,83038,84288,87505,91152,
#Partially deleted in new
chr2	68734864	68813394	chr2:68734864-68813394	0	+	68734864	68734864	8553170	5	396,200,88,208,108,	0,40356,47368,72408,78422,
#Partially deleted in new
chr2	68734881	68826302	chr2:68734881-68826302	1	+	68735199	68826194	789624	10	379,200,88,205,133,74,122,197,533,316,	0,40339,47351,72394,78405,81407,82991,84241,87458,91105,
#Partially deleted in new
chr2	68734951	68775417	chr2:68734951-68775417	0	+	68734951	68734951	8553170	3	309,93,197,	0,22686,40269,
#Partially deleted in new
chr2	68735075	68816552	chr2:68735075-68816552	0	+	68735199	68807431	789624	5	185,200,208,133,264,	0,40145,72197,78211,81213,
#Partially deleted in new
chr2	68735108	68775138	chr2:68735108-68775138	0	+	68735108	68735108	8553170	3	152,93,293,	0,22529,39737,
#Partially deleted in new
chr2	68735311	68807480	chr2:68735311-68807480	0	+	68735311	68735311	8553170	5	228,200,88,117,208,	0,39909,46921,52528,71961,
#Partially deleted in new
chr2	68735376	68775239	chr2:68735376-68775239	0	+	68735376	68735376	8553170	2	163,394,	0,39469,
#Partially deleted in new
chr2	68774800	68826833	chr2:68774800-68826833	1	+	68775180	68826194	789624	10	620,88,117,205,133,74,122,197,533,847,	0,7432,13039,32475,38486,41488,43072,44322,47539,51186,
#Partially deleted in new
chr2	68774800	68826833	chr2:68774800-68826833	1	+	68775180	68826194	789624	10	620,88,117,208,133,74,122,197,533,847,	0,7432,13039,32472,38486,41488,43072,44322,47539,51186,
#Partially deleted in new
chr2	68774903	68817995	chr2:68774903-68817995	0	+	68775180	68775686	789624	8	453,168,88,117,208,131,74,123,	0,701,7329,12936,32369,38385,41385,42969,
#Partially deleted in new
chr2	68774939	68819742	chr2:68774939-68819742	1	+	68775180	68819517	789624	8	481,88,117,208,133,74,122,620,	0,7293,12900,32333,38347,41349,42933,44183,
#Partially deleted in new
chr2	68807230	68826773	chr2:68807230-68826773	0	+	68807230	68826194	789624	7	250,133,74,122,197,533,787,	0,6056,9058,10642,11892,15109,18756,
#Partially deleted in new
chr2	68816701	68826833	chr2:68816701-68826833	1	+	68817912	68826194	789624	5	234,122,197,533,847,	0,1171,2421,5638,9285,
#Partially deleted in new
chr2	68832043	68837708	chr2:68832043-68837708	0	+	68832043	68832043	8553170	2	109,327,	0,5338,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	68832815	68837192	chr2:68832815-68837192	3	-	68832815	68832815	8553170	2	235,782,	0,3595,
#Partially deleted in new
chr2	68835003	68837724	chr2:68835003-68837724	3	+	68835003	68835003	8553170	2	231,343,	0,2378,
#Partially deleted in new
chr2	68865480	68871517	chr2:68865480-68871517	3	-	68865630	68871358	789624	2	1091,493,	0,5544,
#Partially deleted in new
chr2	68921247	68926834	chr2:68921247-68926834	3	+	68921247	68926834	8553170	6	12,54,135,108,142,95,	0,1257,1492,3309,4437,5492,
#Partially deleted in new
chr2	68945231	68952970	chr2:68945231-68952970	3	-	68945367	68952861	789624	6	219,157,111,138,54,121,	0,1072,1915,4894,5470,7618,
#Partially deleted in new
chr2	68945296	68952880	chr2:68945296-68952880	1	-	68946289	68952861	789624	5	1164,111,138,54,31,	0,1850,4829,5405,7553,
#Partially deleted in new
chr2	68974572	68980974	chr2:68974572-68980974	3	+	68974635	68980823	789624	6	117,54,138,111,148,246,	0,2922,3064,4298,5340,6156,
#Partially deleted in new
chr2	68974635	68978109	chr2:68974635-68978109	0	+	68974635	68974635	8553170	3	54,54,473,	0,2859,3001,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr2	69013177	69249327	chr2:69013177-69249327	3	+	69013499	69245485	0	18	474,72,72,82,34,80,69,81,61,99,70,79,96,42,96,168,81,4103,	0,26866,31564,57469,58576,59844,62412,64230,77681,89664,109839,111387,138991,157070,168608,169315,180157,232047,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	69013305	69146401	chr2:69013305-69146401	1	+	69013499	69145376	0	13	346,72,72,82,34,80,69,81,61,99,70,79,1076,	0,26738,31436,57341,58448,59716,62284,64102,77553,89536,109711,111259,132020,
#Partially deleted in new
chr2	69013356	69103432	chr2:69013356-69103432	0	+	69013356	69013356	8553170	10	295,72,72,82,34,80,69,81,61,591,	0,26687,31385,57290,58397,59665,62233,64051,77502,89485,
#Partially deleted in new
chr2	69013396	69172558	chr2:69013396-69172558	1	+	69013499	69172384	0	15	255,72,72,82,34,80,69,81,61,99,70,79,96,42,192,	0,26647,31345,57250,58357,59625,62193,64011,77462,89445,109620,111168,138772,156851,158970,
#Partially deleted in new
chr2	69075602	69135169	chr2:69075602-69135169	0	+	69075602	69135087	789624	7	56,81,61,99,70,79,175,	0,1805,15256,27239,47414,48962,59392,
#Partially deleted in new
chr2	69077229	69090901	chr2:69077229-69090901	0	+	69077229	69077229	8553170	2	259,43,	0,13629,
#Partially deleted in new
chr2	69090645	69103047	chr2:69090645-69103047	0	+	69090645	69090645	8553170	2	274,206,	0,12196,
#Deleted in new
chr2	69103681	69103755	chr2:69103681-69103755	3	+	69103681	69103681	5263520	1	74,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	69181896	69182003	chr2:69181896-69182003	7	-	69181896	69181896	16724991	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	69182876	69182983	chr2:69182876-69182983	3	+	69182876	69182876	8553170	1	107,	0,
#Deleted in new
chr2	69251817	69252364	chr2:69251817-69252364	7	-	69251817	69251817	16724991	1	547,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr2	69319768	69387254	chr2:69319768-69387254	1	-	69326188	69387071	0	20	6465,162,168,128,115,158,121,98,96,164,106,54,80,62,135,59,126,108,108,190,	0,7145,8502,9528,9915,18129,18676,22383,26135,28402,30309,34490,34720,36727,38560,39499,43776,50232,54237,67296,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr2	69319779	69387248	chr2:69319779-69387248	3	-	69326188	69387071	0	19	6454,162,168,128,115,158,121,98,96,164,106,80,62,135,59,126,108,108,184,	0,7134,8491,9517,9904,18118,18665,22372,26124,28391,30298,34709,36716,38549,39488,43765,50221,54226,67285,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	69334599	69334692	chr2:69334599-69334692	3	+	69334599	69334599	8553170	1	93,	0,
#Partially deleted in new
chr2	69350097	69363592	chr2:69350097-69363592	0	-	69350097	69350097	8553170	7	86,54,80,62,135,59,48,	0,4161,4391,6398,8231,9170,13447,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	69363610	69387250	chr2:69363610-69387250	0	-	69363610	69363610	8553170	5	60,108,163,108,186,	0,6390,7699,10395,23454,
#Partially deleted in new
chr2	69395749	69437628	chr2:69395749-69437628	3	-	69396245	69437422	0	8	541,175,61,115,67,136,104,268,	0,4614,10272,19435,23788,27832,36152,41611,
#Partially deleted in new
chr2	69396112	69437628	chr2:69396112-69437628	1	-	69396245	69415245	0	7	178,175,61,115,67,104,358,	0,4251,9909,19072,23425,35789,41158,
#Partially deleted in new
chr2	69396114	69437435	chr2:69396114-69437435	0	-	69396114	69396114	789624	6	176,61,115,67,104,75,	0,9907,19070,23423,35787,41246,
#Partially deleted in new
chr2	69396119	69437475	chr2:69396119-69437475	1	-	69396245	69431995	0	8	171,175,61,115,67,136,104,205,	0,4244,9902,19065,23418,27462,35782,41151,
#Partially deleted in new
chr2	69396119	69415299	chr2:69396119-69415299	0	-	69399352	69415299	789624	5	171,144,175,61,115,	0,3119,4244,9902,19065,
#Partially deleted in new
chr2	69396122	69416204	chr2:69396122-69416204	1	-	69396245	69415245	0	5	168,175,61,115,39,	0,4241,9899,19062,20043,
#Partially deleted in new
chr2	69400362	69437417	chr2:69400362-69437417	0	-	69400362	69415245	789624	6	176,61,115,67,104,57,	0,5659,14822,19175,31539,36998,
#Partially deleted in new
chr2	69400372	69437425	chr2:69400372-69437425	0	-	69400372	69415245	789624	6	166,61,115,67,104,155,	0,5649,14812,19165,31529,36898,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	69406032	69437434	chr2:69406032-69437434	0	-	69429986	69431995	789624	7	50,115,67,136,118,104,74,	0,9152,13505,17549,23871,25869,31328,
#Partially deleted in new
chr2	69410802	69437395	chr2:69410802-69437395	0	-	69419578	69431995	789624	5	338,115,67,104,35,	0,4382,8735,21099,26558,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	69457996	69509280	chr2:69457996-69509280	0	-	69465424	69509280	789624	5	8555,96,105,158,50,	0,37988,47572,49424,51234,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	69461399	69643654	chr2:69461399-69643654	1	-	69461666	69643040	789624	15	306,210,279,287,155,80,104,133,82,122,143,109,119,397,80,	0,47851,53071,57554,59434,63633,65816,68608,69225,70641,81123,83036,95460,181478,182175,
#Partially deleted in new
chr2	69465845	69509280	chr2:69465845-69509280	0	-	69465845	69509280	789624	4	706,105,158,50,	0,39723,41575,43385,
#Partially deleted in new
chr2	69467786	69643717	chr2:69467786-69643717	3	-	69475868	69643040	0	22	8177,111,111,102,102,96,105,158,230,279,287,155,80,104,133,82,122,143,109,119,397,143,	0,9093,11164,13073,14924,28198,37782,39634,41444,46684,51167,53047,57246,59429,62221,62838,64254,74736,76649,89073,175091,175788,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	69478455	69509493	chr2:69478455-69509493	0	-	69478455	69478455	8553170	7	606,102,102,96,105,158,263,	0,2404,4255,17529,27113,28965,30775,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr2	69481055	69643717	chr2:69481055-69643717	1	-	69482585	69643040	0	18	1757,96,105,158,230,279,287,155,80,104,133,82,122,143,109,119,397,143,	0,14929,24513,26365,28175,33415,37898,39778,43977,46160,48952,49569,50985,61467,63380,75804,161822,162519,
#Partially deleted in new
chr2	69499868	69509262	chr2:69499868-69509262	0	-	69500296	69509262	789624	4	433,105,158,32,	0,5700,7552,9362,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	69516750	69517046	chr2:69516750-69517046	3	+	69516750	69516750	8553170	1	296,	0,
#Deleted in new
chr2	69520042	69520174	chr2:69520042-69520174	3	-	69520042	69520042	789624	1	132,	0,
#Partially deleted in new
chr2	69531716	69544509	chr2:69531716-69544509	0	-	69531716	69531716	8553170	3	446,143,74,	0,10806,12719,
#Partially deleted in new
chr2	69544238	69643717	chr2:69544238-69643717	0	-	69544238	69544238	8553170	4	306,119,397,143,	0,12621,98639,99336,
#Partially deleted in new
chr2	69594740	69595058	chr2:69594740-69595058	7	-	69594740	69594740	16724991	1	318,	0,
#Partially deleted in new
chr2	69597352	69598951	chr2:69597352-69598951	7	+	69597352	69597352	16724991	3	233,613,129,	0,540,1470,
#Deleted in new
chr2	69642876	69643960	chr2:69642876-69643960	0	-	69642876	69642876	8553170	2	398,169,	0,915,
#Deleted in new
chr2	69642905	69643950	chr2:69642905-69643950	0	-	69642905	69642905	8553170	2	369,208,	0,837,
#Partially deleted in new
chr2	69643084	69674349	chr2:69643084-69674349	0	-	69643084	69643084	8553170	2	190,327,	0,30938,
#Deleted in new
chr2	69643092	69643845	chr2:69643092-69643845	0	-	69643092	69643092	8553170	2	182,271,	0,482,
#Partially deleted in new
chr2	69644424	69781560	chr2:69644424-69781560	0	+	69644424	69644424	8553170	4	481,285,98,41,	0,8573,76349,137095,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	69700191	69713847	chr2:69700191-69713847	3	-	69700191	69700191	8553170	2	184,236,	0,13420,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	69720790	69825774	chr2:69720790-69825774	0	+	69720790	69720790	8553170	12	81,55,88,95,114,2768,57,94,96,59,123,319,	0,60729,67263,83742,85594,87115,91862,95310,97808,98489,99908,104665,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	69741973	69827100	chr2:69741973-69827100	3	+	69781565	69825515	789624	13	202,55,88,95,114,91,80,57,94,96,59,123,1645,	0,39546,46080,62559,64411,65932,68620,70679,74127,76625,77306,78725,83482,
#Partially deleted in new
chr2	69741973	69825781	chr2:69741973-69825781	1	+	69781565	69825515	789624	13	202,55,88,95,48,91,80,57,94,96,59,123,326,	0,39546,46080,62559,64411,65932,68620,70679,74127,76625,77306,78725,83482,
#Partially deleted in new
chr2	69742101	69807996	chr2:69742101-69807996	0	+	69742101	69742101	8553170	6	74,81,88,95,114,91,	0,39392,45952,62431,64283,65804,
#Partially deleted in new
chr2	69742104	69810620	chr2:69742104-69810620	0	+	69742104	69742104	8553170	7	71,55,123,95,114,91,27,	0,39415,61288,62428,64280,65801,68489,
#Partially deleted in new
chr2	69742131	69818655	chr2:69742131-69818655	0	+	69781565	69810691	789624	10	44,55,88,95,48,91,863,57,94,57,	0,39388,45922,62401,64253,65774,68462,70521,73969,76467,
#Partially deleted in new
chr2	69742132	69810725	chr2:69742132-69810725	0	+	69742132	69742132	8553170	7	43,55,88,95,48,91,132,	0,39387,45921,62400,64252,65773,68461,
#Partially deleted in new
chr2	69781161	69804589	chr2:69781161-69804589	0	+	69781161	69781161	8553170	4	138,55,88,57,	0,358,6892,23371,
#Partially deleted in new
chr2	69807977	69810902	chr2:69807977-69810902	0	+	69807977	69808004	789624	2	212,309,	0,2616,
#Partially deleted in new
chr2	69807981	69811424	chr2:69807981-69811424	0	+	69807981	69808004	789624	3	208,80,88,	0,2612,3355,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	69814786	69825783	chr2:69814786-69825783	0	+	69814786	69814786	8553170	4	3908,59,123,328,	0,4493,5912,10669,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	69829641	69881396	chr2:69829641-69881396	3	+	69829892	69879004	789624	14	511,124,97,98,113,66,85,91,138,70,76,146,88,2488,	0,7905,9815,11300,13507,14489,17901,20010,25181,31636,35258,40077,42103,49267,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	69829685	69840176	chr2:69829685-69840176	0	+	69829685	69829685	8553170	4	467,124,97,120,	0,7861,9771,10371,
#Partially deleted in new
chr2	69842699	69854860	chr2:69842699-69854860	0	+	69842699	69842699	8553170	5	562,66,85,91,38,	0,1431,4843,6952,12123,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	69844508	69844933	chr2:69844508-69844933	7	-	69844508	69844508	16724991	1	425,	0,
#Partially deleted in new
chr2	69869556	69878990	chr2:69869556-69878990	0	+	69869556	69869556	8553170	3	308,88,82,	0,2188,9352,
#Partially deleted in new
chr2	69873564	69873819	chr2:69873564-69873819	7	-	69873564	69873564	16724991	1	255,	0,
#Partially deleted in new
chr2	69893559	69905217	chr2:69893559-69905217	3	+	69893984	69904308	789624	6	459,121,113,80,65,964,	0,1534,2876,3817,9621,10694,
#Partially deleted in new
chr2	69893958	69905218	chr2:69893958-69905218	1	+	69893984	69904382	789624	5	60,121,113,80,965,	0,1135,2477,3418,10295,
#Partially deleted in new
chr2	69893963	69904671	chr2:69893963-69904671	0	+	69893984	69904308	789624	7	55,121,113,80,65,172,160,	0,1130,2472,3413,9217,10290,10548,
#Partially deleted in new
chr2	69896519	69903407	chr2:69896519-69903407	0	+	69896519	69896519	8553170	3	29,80,227,	0,857,6661,
#Partially deleted in new
chr2	69897687	69938259	chr2:69897687-69938259	0	+	69916143	69938259	789624	8	55,65,172,100,30,115,160,163,	0,5493,6566,18433,24048,37663,39547,40409,
#Deleted in new
chr2	69904253	69905575	chr2:69904253-69905575	0	+	69904253	69904308	789624	3	172,122,310,	0,258,1012,
#Partially deleted in new
chr2	69915040	69942938	chr2:69915040-69942938	3	+	69915330	69938284	0	5	363,100,115,160,4842,	0,1080,20310,22194,23056,
#Partially deleted in new
chr2	69915070	69942945	chr2:69915070-69942945	1	+	69915330	69938284	0	6	333,100,30,115,160,4849,	0,1050,6665,20280,22164,23026,
#Partially deleted in new
chr2	69915108	69938192	chr2:69915108-69938192	0	+	69916143	69937048	789624	5	295,100,115,376,96,	0,1012,20242,21910,22988,
#Deleted in new
chr2	69915131	69916446	chr2:69915131-69916446	0	+	69915131	69915131	8553170	2	272,326,	0,989,
#Deleted in new
chr2	69938151	69942942	chr2:69938151-69942942	0	+	69938151	69938151	8553170	2	188,302,	0,4489,
#Deleted in new
chr2	69960088	69962265	chr2:69960088-69962265	3	-	69960656	69961688	789624	1	2177,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	69962262	70087015	chr2:69962262-70087015	1	-	69962262	69962262	789624	11	1238,197,97,203,123,103,38,121,150,78,38,	0,1968,26479,34423,69870,88940,97380,119107,121275,123284,124715,
#Partially deleted in new
chr2	69962769	70086220	chr2:69962769-70086220	1	-	69962769	69962769	8553170	6	731,97,203,103,78,97,	0,25972,33916,88433,122777,123354,
#Deleted in new
chr2	69963253	69964774	chr2:69963253-69964774	0	-	69963253	69963253	8553170	2	247,544,	0,977,
#Partially deleted in new
chr2	69963253	70086218	chr2:69963253-70086218	0	-	69963253	69963253	8553170	6	247,197,203,103,78,95,	0,977,33432,87949,122293,122870,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	69963253	70086136	chr2:69963253-70086136	0	-	69963253	69963253	8553170	9	247,60,97,203,117,103,38,78,82,	0,25192,25488,33432,54761,87949,96389,122293,122801,
#Partially deleted in new
chr2	69963253	70015509	chr2:69963253-70015509	0	-	69963253	69963253	8553170	4	247,97,203,62,	0,25488,33432,52194,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	69963253	70083586	chr2:69963253-70083586	0	-	69963253	69963253	8553170	5	247,197,117,103,80,	0,977,54761,87949,120253,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	69963253	70016150	chr2:69963253-70016150	0	-	69963253	69963253	8553170	5	247,77,203,70,313,	0,12305,33432,52194,52584,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	69963253	70086292	chr2:69963253-70086292	0	-	69963253	69963253	8553170	7	247,60,203,103,181,78,169,	0,25192,33432,87949,120253,122293,122870,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	69963253	70051303	chr2:69963253-70051303	0	-	69963253	69963253	8553170	4	247,122,203,101,	0,5145,33432,87949,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	69963253	70086197	chr2:69963253-70086197	0	-	69963253	69963253	8553170	8	247,60,203,117,103,181,78,74,	0,25192,33432,54761,87949,120253,122293,122870,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	69963253	70087004	chr2:69963253-70087004	0	-	69963253	69963253	8553170	9	247,117,103,62,38,129,195,78,27,	0,54761,87949,90477,96389,108363,109841,122293,123724,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	69963253	70102909	chr2:69963253-70102909	0	-	69963253	69963253	8553170	6	247,203,133,117,103,119,	0,33432,52194,54761,87949,139537,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	69963253	70051304	chr2:69963253-70051304	0	-	69963253	69963253	8553170	5	247,197,203,117,102,	0,977,33432,54761,87949,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	69963253	70019203	chr2:69963253-70019203	0	-	69963253	69963253	8553170	6	247,77,97,203,117,66,	0,12305,25488,33432,54761,55884,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	69963253	70063987	chr2:69963253-70063987	0	-	69963253	69963253	8553170	7	247,203,117,123,103,38,96,	0,33432,54761,68879,87949,96389,100638,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	69963254	70086271	chr2:69963254-70086271	0	-	69963254	69963254	8553170	5	246,117,103,78,217,	0,54760,87948,122292,122800,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	69963258	70087011	chr2:69963258-70087011	0	-	69963258	69963258	8553170	7	242,97,203,117,103,78,34,	0,25483,33427,54756,87944,122288,123719,
#Partially deleted in new
chr2	69963259	70086273	chr2:69963259-70086273	0	-	69963259	69963259	8553170	5	241,203,103,78,219,	0,33426,87943,122287,122795,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	69963266	70085750	chr2:69963266-70085750	0	-	69963266	69963266	8553170	5	234,203,117,103,83,	0,33419,54748,87936,122401,
#Partially deleted in new
chr2	69963281	69976677	chr2:69963281-69976677	0	-	69963281	69963281	8553170	3	219,77,355,	0,12277,13041,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	69963281	70015526	chr2:69963281-70015526	0	-	69963281	69963281	8553170	4	219,60,203,79,	0,25164,33404,52166,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	69963281	70083565	chr2:69963281-70083565	0	-	69963281	69963281	8553170	6	219,77,203,123,103,59,	0,12277,33404,68851,87921,120225,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	69963281	69970792	chr2:69963281-69970792	0	-	69963281	69963281	8553170	4	219,197,118,31,	0,949,5117,7480,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	69963281	70019177	chr2:69963281-70019177	0	-	69963281	69963281	8553170	4	219,77,117,40,	0,12277,54733,55856,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	69963281	70086399	chr2:69963281-70086399	0	-	69963281	69963281	8553170	8	219,203,29,64,117,103,78,148,	0,33404,37248,51288,54733,87921,122265,122970,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	69963281	70086273	chr2:69963281-70086273	0	-	69963281	69963281	8553170	8	219,97,203,117,197,38,78,150,	0,25460,33404,54733,92432,96361,122265,122842,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	69963281	70085879	chr2:69963281-70085879	0	-	69963281	69963281	8553170	10	219,197,203,64,117,103,62,150,78,64,	0,949,33404,48373,54733,87921,90449,120256,122265,122534,
#Partially deleted in new
chr2	69963281	69976005	chr2:69963281-69976005	0	-	69963281	69963281	8553170	2	219,447,	0,12277,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	69963281	70086272	chr2:69963281-70086272	1	-	69963281	69963281	8553170	9	219,97,203,103,62,197,38,78,149,	0,25460,33404,87921,90449,92432,96361,122265,122842,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	69963281	70086292	chr2:69963281-70086292	0	-	69963281	69963281	8553170	7	219,59,60,203,103,78,169,	0,1087,25164,33404,87921,122265,122842,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	69963281	70086273	chr2:69963281-70086273	0	-	69963281	69963281	8553170	6	219,203,117,103,78,150,	0,33404,54733,87921,122265,122842,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	69963281	70086275	chr2:69963281-70086275	0	-	69963281	69963281	8553170	9	219,77,97,203,117,103,181,78,152,	0,12277,25460,33404,54733,87921,120225,122265,122842,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	69963281	70085554	chr2:69963281-70085554	0	-	69963281	69963281	8553170	7	219,203,117,123,103,181,8,	0,33404,54733,68851,87921,120225,122265,
#Partially deleted in new
chr2	69963281	70087810	chr2:69963281-70087810	0	-	69963281	69963281	8553170	6	219,97,203,103,78,23,	0,25460,33404,87921,122265,124506,
#Partially deleted in new
chr2	69963281	70086273	chr2:69963281-70086273	0	-	69963281	69963281	8553170	8	219,77,97,203,98,103,78,458,	0,12277,25460,33404,48373,87921,122265,122534,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	69963281	70086294	chr2:69963281-70086294	0	-	69963281	69963281	8553170	7	219,60,97,203,103,78,171,	0,25164,25460,33404,87921,122265,122842,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	69963285	70016026	chr2:69963285-70016026	0	-	69963285	69963285	8553170	5	215,97,92,31,189,	0,25456,33400,33572,52552,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	69963288	69971282	chr2:69963288-69971282	0	-	69963288	69963288	8553170	3	212,118,521,	0,5110,7473,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	69963288	70087005	chr2:69963288-70087005	0	-	69963288	69963288	8553170	6	212,203,117,103,78,28,	0,33397,54726,87914,122258,123689,
#Partially deleted in new
chr2	69963296	70086273	chr2:69963296-70086273	0	-	69963296	69963296	8553170	4	204,203,78,150,	0,33389,122250,122827,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	69963301	70085575	chr2:69963301-70085575	0	-	69963301	69963301	8553170	5	199,203,103,197,29,	0,33384,87901,92412,122245,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	69963316	70086273	chr2:69963316-70086273	0	-	69963316	69963316	8553170	7	184,31,117,103,150,78,150,	0,33541,54698,87886,120221,122230,122807,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	69963333	70085736	chr2:69963333-70085736	0	-	69963333	69963333	8553170	7	167,97,203,103,255,38,69,	0,25408,33352,87869,92322,96309,122334,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	69963365	70086165	chr2:69963365-70086165	0	-	69963365	69963365	8553170	7	135,197,117,103,181,78,111,	0,865,54649,87837,120141,122181,122689,
#Partially deleted in new
chr2	69963387	70087320	chr2:69963387-70087320	0	-	69963387	69963387	8553170	4	113,103,78,248,	0,87815,122159,123685,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	69963389	70083616	chr2:69963389-70083616	1	-	69963389	69963389	8553170	6	111,60,203,270,103,79,	0,25056,33296,39656,87813,120148,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	69963394	70086273	chr2:69963394-70086273	1	-	69963394	69963394	8553170	9	106,77,60,97,203,103,38,78,150,	0,12164,25051,25347,33291,87808,96248,122152,122729,
#Partially deleted in new
chr2	69963404	70086273	chr2:69963404-70086273	0	-	69963404	69963404	8553170	8	96,97,203,103,81,181,78,52,	0,25337,33281,87798,113896,120102,122142,122817,
#Partially deleted in new
chr2	69963438	70086416	chr2:69963438-70086416	0	-	69963438	69963438	8553170	6	62,97,203,103,78,165,	0,25303,33247,87764,122108,122813,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	69963446	70087015	chr2:69963446-70087015	0	-	69963446	69963446	8553170	8	54,77,203,117,103,181,78,38,	0,12112,33239,54568,87756,120060,122100,123531,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	69963449	70087015	chr2:69963449-70087015	0	-	69963449	69963449	8553170	7	51,203,103,255,81,78,38,	0,33236,87753,92206,113851,122097,123528,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	69963459	70016341	chr2:69963459-70016341	1	-	69963459	69963459	8553170	5	41,97,92,31,504,	0,25282,33226,33398,52378,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	69963461	70086291	chr2:69963461-70086291	1	-	69963461	69963461	8553170	7	39,59,97,123,103,78,168,	0,907,25280,68671,87741,122085,122662,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	69963461	70086171	chr2:69963461-70086171	0	-	69963461	69963461	8553170	6	39,203,123,103,78,48,	0,33224,68671,87741,122085,122662,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	69963462	70087812	chr2:69963462-70087812	0	-	69963462	69963462	8553170	7	38,203,117,103,38,78,25,	0,33223,54552,87740,96180,122084,124325,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	69963469	70087011	chr2:69963469-70087011	1	-	69963469	69963469	8553170	7	31,113,77,117,103,78,34,	0,11879,12089,54545,87733,122077,123508,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	69963469	70087001	chr2:69963469-70087001	0	-	69963469	69963469	8553170	8	31,97,203,123,103,181,78,24,	0,25272,33216,68663,87733,120037,122077,123508,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	69963486	70086273	chr2:69963486-70086273	0	-	69963486	69963486	8553170	8	14,77,60,203,103,38,78,150,	0,12072,24959,33199,87716,96156,122060,122637,
#Partially deleted in new
chr2	69963487	70086273	chr2:69963487-70086273	0	-	69963487	69963487	8553170	5	13,203,103,78,150,	0,33198,87715,122059,122636,
#Partially deleted in new
chr2	69964271	70053737	chr2:69964271-70053737	0	-	69964271	69964271	8553170	5	156,97,203,103,7,	0,24470,32414,86931,89459,
#Partially deleted in new
chr2	69964372	70087343	chr2:69964372-70087343	0	-	69964372	69964372	8553170	5	55,203,103,78,63,	0,32313,86830,121174,122908,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	69964409	70085595	chr2:69964409-70085595	0	-	69964409	69964409	8553170	7	18,203,117,123,103,81,49,	0,32276,53605,67723,86793,112891,121137,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	69988740	70019188	chr2:69988740-70019188	0	-	69988740	69988740	8553170	5	98,203,133,117,51,	0,7945,26707,29274,30397,
#Partially deleted in new
chr2	69993379	70053785	chr2:69993379-70053785	1	-	69993379	69993379	8553170	4	836,203,103,55,	0,3306,57823,60351,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	69993862	70085570	chr2:69993862-70085570	0	-	69993862	69993862	8553170	4	356,203,117,24,	0,2823,24152,91684,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	69993862	70053772	chr2:69993862-70053772	0	-	69993862	69993862	8553170	5	356,203,123,103,42,	0,2823,38270,57340,59868,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	69996686	70028601	chr2:69996686-70028601	0	-	69996686	69996686	8553170	2	202,195,	0,31720,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	69996689	70087015	chr2:69996689-70087015	0	-	69996689	69996689	8553170	7	199,117,103,255,81,78,38,	0,21325,54513,58966,80611,88857,90288,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	69996731	70087006	chr2:69996731-70087006	0	-	69996731	69996731	8553170	6	157,117,103,181,78,29,	0,21283,54471,86775,88815,90246,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	69996732	70086132	chr2:69996732-70086132	0	-	69996732	69996732	8553170	8	156,64,133,117,103,38,78,78,	0,14922,18715,21282,54470,62910,88814,89322,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	69996734	70034989	chr2:69996734-70034989	0	-	69996734	69996734	8553170	3	154,123,97,	0,35398,38158,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	69996739	70086273	chr2:69996739-70086273	1	-	69996739	69996739	8553170	7	149,64,133,117,103,78,219,	0,14915,18708,21275,54463,88807,89315,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	69996751	70086268	chr2:69996751-70086268	1	-	69996751	69996751	8553170	7	137,222,103,197,181,78,145,	0,1161,54451,58962,86755,88795,89372,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	69996754	70088508	chr2:69996754-70088508	0	-	69996754	69996754	8553170	5	134,123,103,78,79,	0,35378,54448,88792,91675,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	69996757	70012216	chr2:69996757-70012216	0	-	69996757	69996757	8553170	2	131,562,	0,14897,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	69996762	70086273	chr2:69996762-70086273	0	-	69996762	69996762	8553170	6	126,117,81,150,78,150,	0,21252,80538,86775,88784,89361,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	69996770	70086273	chr2:69996770-70086273	0	-	69996770	69996770	8553170	8	118,133,117,103,38,150,78,150,	0,18677,21244,54432,62872,86767,88776,89353,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	69996771	70085854	chr2:69996771-70085854	0	-	69996771	69996771	8553170	8	117,103,62,197,38,150,78,39,	0,54431,56959,58942,62871,86766,88775,89044,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	69996771	70085574	chr2:69996771-70085574	2	-	69996771	69996771	8553170	6	117,103,197,38,150,28,	0,54431,58942,62871,86766,88775,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	69996786	70059680	chr2:69996786-70059680	0	-	69996786	69996786	8553170	4	102,117,103,38,	0,21228,54416,62856,
#Partially deleted in new
chr2	69996802	70089206	chr2:69996802-70089206	1	-	69996802	69996802	8553170	5	86,103,150,78,777,	0,54400,86735,88744,91627,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	69996810	70085934	chr2:69996810-70085934	0	-	69996810	69996810	8553170	6	78,117,103,181,78,119,	0,21204,54392,86696,88736,89005,
#Partially deleted in new
chr2	69996817	70087907	chr2:69996817-70087907	0	-	69996817	69996817	8553170	5	71,103,181,78,120,	0,54385,86689,88729,90970,
#Partially deleted in new
chr2	69996822	70086273	chr2:69996822-70086273	0	-	69996822	69996822	8553170	5	66,103,150,78,150,	0,54380,86715,88724,89301,
#Partially deleted in new
chr2	69996829	70086275	chr2:69996829-70086275	0	-	69996829	69996829	8553170	5	59,103,181,78,152,	0,54373,86677,88717,89294,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	69996853	70088963	chr2:69996853-70088963	0	-	69996853	69996853	8553170	5	35,123,103,78,366,	0,35279,54349,88693,91744,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	69996870	70087315	chr2:69996870-70087315	0	-	69996870	69996870	8553170	5	18,123,103,78,243,	0,35262,54332,88676,90202,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	69996871	70086273	chr2:69996871-70086273	0	-	69996871	69996871	8553170	7	17,117,103,81,150,78,150,	0,21143,54331,80429,86666,88675,89252,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	70015447	70019143	chr2:70015447-70019143	0	-	70015447	70015447	8553170	3	133,117,167,	0,2567,3529,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	70015539	70086098	chr2:70015539-70086098	0	-	70015539	70015539	8553170	6	41,117,103,181,78,44,	0,2475,35663,67967,70007,70515,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	70018005	70086273	chr2:70018005-70086273	0	-	70018005	70018005	8553170	3	126,78,458,	0,67541,67810,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	70018015	70086273	chr2:70018015-70086273	0	-	70018015	70018015	8553170	4	116,103,78,458,	0,33187,67531,67800,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	70018066	70086274	chr2:70018066-70086274	0	-	70018066	70018066	8553170	5	65,103,150,78,151,	0,33136,65471,67480,68057,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	70029997	70086267	chr2:70029997-70086267	1	-	70029997	70029997	8553170	5	1934,123,103,78,213,	0,2135,21205,55549,56057,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	70031365	70055774	chr2:70031365-70055774	0	-	70031365	70031365	8553170	4	566,123,103,119,	0,767,19837,24290,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	70031432	70087000	chr2:70031432-70087000	0	-	70031432	70031432	8553170	5	499,103,181,78,23,	0,19770,52074,54114,55545,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	70031566	70086166	chr2:70031566-70086166	0	-	70031566	70031566	8553170	6	365,123,103,181,78,43,	0,566,19636,51940,53980,54557,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	70031578	70083627	chr2:70031578-70083627	0	-	70031578	70031578	8553170	5	353,123,103,38,121,	0,554,19624,28064,51928,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	70031697	70069157	chr2:70031697-70069157	0	-	70031697	70031697	8553170	6	234,123,103,62,38,39,	0,435,19505,22033,27945,37421,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	70031733	70088451	chr2:70031733-70088451	1	-	70031733	70031733	8553170	8	198,123,103,85,197,38,78,42,	0,399,19469,21997,23980,27909,53813,56676,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	70031752	70087343	chr2:70031752-70087343	0	-	70031752	70031752	8553170	5	179,123,103,78,63,	0,380,19450,53794,55528,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	70031840	70086273	chr2:70031840-70086273	0	-	70031840	70031840	8553170	5	91,123,103,78,150,	0,292,19362,53706,54283,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	70031853	70086273	chr2:70031853-70086273	1	-	70031853	70031853	8553170	6	102,123,103,181,78,458,	0,279,19349,51653,53693,53962,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	70031884	70086273	chr2:70031884-70086273	0	-	70031884	70031884	8553170	6	47,123,103,38,78,150,	0,248,19318,27758,53662,54239,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	70032137	70086269	chr2:70032137-70086269	0	-	70032137	70032137	8553170	5	118,103,150,78,215,	0,19065,51400,53409,53917,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	70032137	70086254	chr2:70032137-70086254	1	-	70032137	70032137	8553170	8	118,103,62,197,81,181,78,200,	0,19065,21593,23576,45163,51369,53409,53917,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	70032138	70085573	chr2:70032138-70085573	0	-	70032138	70032138	8553170	7	117,103,62,197,38,150,27,	0,19064,21592,23575,27504,51399,53408,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	70032142	70086269	chr2:70032142-70086269	0	-	70032142	70032142	8553170	5	113,103,150,78,146,	0,19060,51395,53404,53981,
#Partially deleted in new
chr2	70032197	70086485	chr2:70032197-70086485	0	-	70032197	70032197	8553170	6	58,103,181,78,88,55,	0,19005,51309,53349,53618,54233,
#Partially deleted in new
chr2	70032203	70086250	chr2:70032203-70086250	0	-	70032203	70032203	8553170	4	52,103,78,435,	0,18999,53343,53612,
#Partially deleted in new
chr2	70032209	70046664	chr2:70032209-70046664	0	-	70032209	70032209	8553170	2	46,162,	0,14293,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	70045258	70087304	chr2:70045258-70087304	1	-	70045258	70045258	8553170	5	1538,103,150,78,24,	0,5944,38279,40288,42022,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	70046567	70059961	chr2:70046567-70059961	0	-	70046567	70046567	8553170	3	229,103,319,	0,4635,13075,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	70046613	70054180	chr2:70046613-70054180	0	-	70046613	70046613	8553170	3	183,103,450,	0,4589,7117,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	70048686	70087421	chr2:70048686-70087421	0	-	70048686	70048686	8553170	5	271,103,150,78,141,	0,2516,34851,36860,38594,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	70048690	70055823	chr2:70048690-70055823	0	-	70048690	70048690	8553170	4	267,103,62,110,	0,2512,5040,7023,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	70049044	70086485	chr2:70049044-70086485	1	-	70049044	70049044	8553170	7	1208,103,264,255,38,78,234,	0,2158,4686,6611,10598,36502,37207,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	70049779	70086272	chr2:70049779-70086272	1	-	70049779	70049779	8553170	4	473,103,78,457,	0,1423,35767,36036,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	70050047	70069382	chr2:70050047-70069382	0	-	70050047	70050047	8553170	4	205,103,38,264,	0,1155,9595,19071,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	70050139	70085658	chr2:70050139-70085658	0	-	70050139	70050139	8553170	4	113,103,150,112,	0,1063,33398,35407,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	70050139	70086273	chr2:70050139-70086273	0	-	70050139	70050139	8553170	6	113,103,197,38,78,150,	0,1063,5574,9503,35407,35984,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	70050139	70055783	chr2:70050139-70055783	0	-	70050139	70050139	8553170	4	113,103,62,70,	0,1063,3591,5574,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	70050139	70059679	chr2:70050139-70059679	0	-	70050139	70050139	8553170	5	129,103,85,255,37,	0,1063,3591,5516,9503,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	70050139	70085916	chr2:70050139-70085916	0	-	70050139	70050139	8553170	5	113,103,181,78,101,	0,1063,33367,35407,35676,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	70050139	70086160	chr2:70050139-70086160	0	-	70050139	70050139	8553170	8	113,103,62,197,38,150,78,37,	0,1063,3591,5574,9503,33398,35407,35984,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	70050140	70086273	chr2:70050140-70086273	0	-	70050140	70050140	8553170	7	112,103,62,197,38,78,219,	0,1062,3590,5573,9502,35406,35914,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	70050143	70086074	chr2:70050143-70086074	0	-	70050143	70050143	8553170	5	109,103,150,78,259,	0,1059,33394,35403,35672,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	70050599	70053858	chr2:70050599-70053858	0	-	70050599	70050599	8553170	2	706,128,	0,3131,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	70050810	70060106	chr2:70050810-70060106	1	-	70050810	70050810	8553170	2	495,464,	0,8832,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	70051016	70087006	chr2:70051016-70087006	0	-	70051016	70051016	8553170	5	289,197,181,78,29,	0,4697,32490,34530,35961,
#Partially deleted in new
chr2	70051027	70087435	chr2:70051027-70087435	0	-	70051027	70051027	8553170	4	278,181,78,155,	0,32479,34519,36253,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	70051044	70059983	chr2:70051044-70059983	0	-	70051044	70051044	8553170	4	261,62,197,341,	0,2686,4669,8598,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	70051204	70070802	chr2:70051204-70070802	0	-	70051204	70051204	8553170	2	101,513,	0,19085,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	70051209	70086273	chr2:70051209-70086273	0	-	70051209	70051209	8553170	5	96,62,197,78,150,	0,2521,4504,34337,34914,
#Partially deleted in new
chr2	70051209	70086034	chr2:70051209-70086034	0	-	70051209	70051209	8553170	5	96,81,150,78,219,	0,26091,32328,34337,34606,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	70051213	70086273	chr2:70051213-70086273	0	-	70051213	70051213	8553170	5	92,197,38,78,150,	0,4500,8429,34333,34910,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	70051275	70085894	chr2:70051275-70085894	0	-	70051275	70051275	8553170	6	30,85,197,38,78,79,	0,2455,4438,8367,34271,34540,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	70055616	70086289	chr2:70055616-70086289	0	-	70055616	70055616	8553170	5	294,81,181,78,166,	0,21684,27890,29930,30507,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	70055616	70086273	chr2:70055616-70086273	0	-	70055616	70055616	8553170	5	294,38,78,88,150,	0,4026,29930,30199,30507,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	70055616	70086245	chr2:70055616-70086245	0	-	70055616	70055616	8553170	5	294,38,150,78,122,	0,4026,27921,29930,30507,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	70055616	70081229	chr2:70055616-70081229	0	-	70055616	70055616	8553170	3	294,38,312,	0,4026,25301,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	70055616	70085851	chr2:70055616-70085851	0	-	70055616	70055616	8553170	3	294,38,305,	0,4026,29930,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	70055735	70086267	chr2:70055735-70086267	0	-	70055735	70055735	8553170	4	175,181,78,144,	0,27771,29811,30388,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	70056191	70086220	chr2:70056191-70086220	0	-	70056191	70056191	8553170	4	410,38,78,97,	0,3451,29355,29932,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	70075013	70075272	chr2:70075013-70075272	3	-	70075013	70075013	8553170	1	259,	0,
#Partially deleted in new
chr2	70083573	70085744	chr2:70083573-70085744	0	-	70083573	70083573	8553170	3	114,78,26,	0,1973,2145,
#Partially deleted in new
chr2	70083579	70086181	chr2:70083579-70086181	0	-	70083579	70083579	8553170	2	108,635,	0,1967,
#Deleted in new
chr2	70085566	70086273	chr2:70085566-70086273	0	-	70085566	70085566	8553170	3	58,88,219,	0,249,488,
#Deleted in new
chr2	70087453	70089203	chr2:70087453-70089203	3	+	70087743	70088814	0	1	1750,	0,
#Partially deleted in new
chr2	70089720	70096100	chr2:70089720-70096100	3	+	70089720	70089720	8553170	3	192,59,197,	0,4213,6183,
#Deleted in new
chr2	70093893	70095166	chr2:70093893-70095166	0	-	70093893	70093893	8553170	2	585,208,	0,1065,
#Deleted in new
chr2	70093896	70094994	chr2:70093896-70094994	0	-	70093896	70093896	8553170	3	372,93,36,	0,489,1062,
#Partially deleted in new
chr2	70093938	70103220	chr2:70093938-70103220	1	-	70093938	70093938	8553170	5	309,93,101,134,31,	0,447,1020,8852,9251,
#Partially deleted in new
chr2	70102550	70102862	chr2:70102550-70102862	7	+	70102550	70102550	16724991	1	312,	0,
#Partially deleted in new
chr2	70124035	70125317	chr2:70124035-70125317	3	-	70124035	70124035	789624	2	390,272,	0,1010,
#Partially deleted in new
chr2	70149879	70191071	chr2:70149879-70191071	3	-	70150355	70181985	789624	10	685,163,101,108,105,105,111,835,269,99,	0,10745,15212,15648,19677,25793,29652,31283,32787,41093,
#Partially deleted in new
chr2	70149897	70181995	chr2:70149897-70181995	1	-	70150355	70181985	789624	8	667,163,101,108,105,105,111,833,	0,10727,15194,15630,19659,25775,29634,31265,
#Partially deleted in new
chr2	70181479	70191017	chr2:70181479-70191017	0	-	70181479	70181985	789624	2	518,45,	0,9493,
#Partially deleted in new
chr2	70181508	70191004	chr2:70181508-70191004	0	-	70181508	70181985	789624	2	489,87,	0,9409,
#Partially deleted in new
chr2	70181602	70182935	chr2:70181602-70182935	0	-	70181602	70181985	789624	2	395,141,	0,1192,
#Partially deleted in new
chr2	70181629	70248615	chr2:70181629-70248615	0	-	70181629	70181629	8553170	2	368,211,	0,66775,
#Partially deleted in new
chr2	70181649	70190699	chr2:70181649-70190699	0	-	70181649	70181985	789624	3	348,269,516,	0,1017,8534,
#Partially deleted in new
chr2	70181805	70191004	chr2:70181805-70191004	0	-	70181805	70181985	789624	3	192,269,87,	0,861,9112,
#Partially deleted in new
chr2	70181808	70190900	chr2:70181808-70190900	0	-	70181808	70181985	789624	3	189,269,120,	0,858,8972,
#Partially deleted in new
chr2	70181891	70190977	chr2:70181891-70190977	0	-	70181891	70181985	789624	3	106,269,287,	0,775,8799,
#Partially deleted in new
chr2	70181918	70191002	chr2:70181918-70191002	0	-	70181918	70181985	789624	4	79,269,173,30,	0,748,8624,9054,
#Partially deleted in new
chr2	70182396	70190907	chr2:70182396-70190907	0	-	70182396	70182396	8553170	3	49,269,217,	0,270,8294,
#Partially deleted in new
chr2	70182788	70190953	chr2:70182788-70190953	0	-	70182788	70182788	8553170	2	147,411,	0,7754,
#Partially deleted in new
chr2	70182840	70190699	chr2:70182840-70190699	0	-	70182840	70182840	8553170	2	95,197,	0,7662,
#Partially deleted in new
chr2	70209443	70248660	chr2:70209443-70248660	1	-	70212718	70248430	0	12	3402,146,124,85,96,109,76,88,55,99,97,256,	0,4905,5927,6764,6960,7442,15110,18291,19820,21312,26635,38961,
#Partially deleted in new
chr2	70209443	70248641	chr2:70209443-70248641	3	-	70212718	70248430	0	13	3402,146,124,85,96,109,76,88,33,55,99,97,237,	0,4905,5927,6764,6960,7442,15110,18291,19615,19820,21312,26635,38961,
#Partially deleted in new
chr2	70210203	70248580	chr2:70210203-70248580	1	-	70212718	70248430	789624	13	2642,143,124,85,96,109,76,88,33,55,99,97,176,	0,4145,5167,6004,6200,6682,14350,17531,18855,19060,20552,25875,38201,
#Partially deleted in new
chr2	70212316	70248610	chr2:70212316-70248610	1	-	70212718	70248430	789624	10	529,85,96,109,76,88,55,99,97,206,	0,3891,4087,4569,12237,15418,16947,18439,23762,36088,
#Partially deleted in new
chr2	70212675	70215322	chr2:70212675-70215322	0	-	70212675	70212675	8553170	3	170,146,198,	0,1673,2449,
#Partially deleted in new
chr2	70212748	70215660	chr2:70212748-70215660	0	-	70212748	70212748	8553170	3	97,146,290,	0,1600,2622,
#Partially deleted in new
chr2	70214351	70229318	chr2:70214351-70229318	0	-	70214351	70216284	789624	9	143,124,85,96,242,76,57,33,55,	0,1019,1856,2052,2401,10202,13383,14707,14912,
#Partially deleted in new
chr2	70214363	70216844	chr2:70214363-70216844	0	-	70214363	70214363	8553170	5	128,124,85,96,92,	0,1007,1844,2040,2389,
#Partially deleted in new
chr2	70215124	70224592	chr2:70215124-70224592	0	-	70215124	70215124	8553170	6	109,124,85,96,109,39,	0,246,1083,1279,1761,9429,
#Deleted in new
chr2	70216118	70216828	chr2:70216118-70216828	0	-	70216118	70216118	8553170	3	174,96,76,	0,285,634,
#Partially deleted in new
chr2	70216152	70227823	chr2:70216152-70227823	0	-	70216152	70216152	8553170	5	140,96,109,76,89,	0,251,733,8401,11582,
#Partially deleted in new
chr2	70216233	70227839	chr2:70216233-70227839	0	-	70216233	70216233	8553170	6	59,96,109,76,66,105,	0,170,652,8320,9094,11501,
#Deleted in new
chr2	70216424	70217160	chr2:70216424-70217160	0	-	70216424	70216424	8553170	2	75,275,	0,461,
#Partially deleted in new
chr2	70216671	70248454	chr2:70216671-70248454	1	-	70216823	70248430	0	8	323,76,88,33,55,99,97,50,	0,7882,11063,12387,12592,14084,19407,31733,
#Partially deleted in new
chr2	70216821	70225066	chr2:70216821-70225066	0	-	70216821	70216821	8553170	2	173,513,	0,7732,
#Partially deleted in new
chr2	70216847	70248658	chr2:70216847-70248658	0	-	70225356	70248430	789624	9	147,76,66,88,33,55,99,97,254,	0,7706,8480,10887,12211,12416,13908,19231,31557,
#Partially deleted in new
chr2	70224423	70248611	chr2:70224423-70248611	0	-	70227765	70248430	789624	8	206,88,119,33,55,99,97,207,	0,3311,3920,4635,4840,6332,11655,23981,
#Partially deleted in new
chr2	70224425	70236175	chr2:70224425-70236175	0	-	70224511	70236175	789624	5	204,88,55,99,97,	0,3309,4838,6330,11653,
#Partially deleted in new
chr2	70228897	70248640	chr2:70228897-70248640	0	-	70228897	70228897	8553170	4	421,99,97,236,	0,1858,7181,19507,
#Partially deleted in new
chr2	70229189	70248622	chr2:70229189-70248622	0	-	70229189	70229189	8553170	4	129,99,103,218,	0,1566,6883,19215,
#Deleted in new
chr2	70253854	70254010	chr2:70253854-70254010	7	-	70253854	70253854	16724991	1	156,	0,
#Partially deleted in new
chr2	70257385	70275084	chr2:70257385-70275084	0	+	70259478	70275084	789624	4	48,207,175,126,	0,1974,3826,17573,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	70257725	70275666	chr2:70257725-70275666	0	+	70259478	70275666	789624	5	210,207,175,212,153,	0,1634,3486,17233,17788,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	70258136	70281191	chr2:70258136-70281191	3	+	70258164	70277392	789624	6	140,207,175,212,153,4458,	0,1223,3075,16822,17377,18597,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	70258148	70279103	chr2:70258148-70279103	1	+	70258164	70277042	789624	6	128,207,175,212,153,2084,	0,1211,3063,16810,17365,18871,
#Partially deleted in new
chr2	70258418	70275158	chr2:70258418-70275158	0	+	70259478	70275158	789624	4	66,207,175,200,	0,941,2793,16540,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	70274757	70276787	chr2:70274757-70276787	0	+	70274757	70274757	8553170	3	413,153,54,	0,756,1976,
#Partially deleted in new
chr2	70281361	70293771	chr2:70281361-70293771	3	-	70281633	70293649	0	4	323,125,23,154,	0,6706,7988,12256,
#Partially deleted in new
chr2	70281366	70293740	chr2:70281366-70293740	0	-	70281366	70281366	8553170	3	318,125,123,	0,6701,12251,
#Partially deleted in new
chr2	70281503	70293438	chr2:70281503-70293438	1	-	70281633	70289368	789624	4	181,125,23,764,	0,6564,7846,11171,
#Partially deleted in new
chr2	70281504	70293448	chr2:70281504-70293448	1	-	70281633	70289368	789624	5	180,125,23,29,158,	0,6563,7845,9776,11786,
#Partially deleted in new
chr2	70281506	70293224	chr2:70281506-70293224	1	-	70281633	70293160	789624	4	178,125,23,72,	0,6561,7843,11646,
#Partially deleted in new
chr2	70281506	70292776	chr2:70281506-70292776	1	-	70281633	70289368	789624	4	178,125,23,102,	0,6561,7843,11168,
#Partially deleted in new
chr2	70281506	70293711	chr2:70281506-70293711	1	-	70281680	70293649	789624	5	178,107,125,23,94,	0,5758,6561,7843,12111,
#Partially deleted in new
chr2	70287807	70293719	chr2:70287807-70293719	0	-	70287807	70287807	8553170	2	385,102,	0,5810,
#Partially deleted in new
chr2	70287935	70293730	chr2:70287935-70293730	0	-	70287935	70287935	8553170	3	257,23,113,	0,1414,5682,
#Partially deleted in new
chr2	70295974	70302090	chr2:70295974-70302090	3	-	70297288	70302011	789624	3	1503,141,166,	0,4865,5950,
#Partially deleted in new
chr2	70295975	70302056	chr2:70295975-70302056	0	-	70295975	70295975	8553170	3	1502,764,132,	0,4864,5949,
#Partially deleted in new
chr2	70297010	70302056	chr2:70297010-70302056	0	-	70300945	70302011	789624	4	467,141,196,132,	0,3829,4397,4914,
#Partially deleted in new
chr2	70297175	70302045	chr2:70297175-70302045	1	-	70297288	70302011	789624	3	302,141,442,	0,3664,4428,
#Partially deleted in new
chr2	70297425	70301994	chr2:70297425-70301994	0	-	70297425	70301966	789624	3	52,141,325,	0,3414,4244,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	70300507	70302012	chr2:70300507-70302012	0	-	70300507	70300507	8553170	2	473,88,	0,1417,
#Partially deleted in new
chr2	70301450	70302072	chr2:70301450-70302072	3	+	70301450	70301450	8553170	2	169,118,	0,504,
#Partially deleted in new
chr2	70353009	70355915	chr2:70353009-70355915	7	+	70353009	70353009	16724991	2	124,1736,	0,1170,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	70402933	70422678	chr2:70402933-70422678	3	+	70402933	70402933	8553170	4	203,47,51,276,	0,10735,16016,19469,
#Partially deleted in new
chr2	70447279	70554015	chr2:70447279-70554015	3	-	70450858	70553767	0	6	3587,110,150,121,54,288,	0,5938,9059,18336,67579,106448,
#Partially deleted in new
chr2	70449318	70465733	chr2:70449318-70465733	0	-	70449604	70465733	789624	4	303,110,150,118,	0,3899,7020,16297,
#Partially deleted in new
chr2	70449318	70553772	chr2:70449318-70553772	1	-	70451746	70553767	0	7	303,32,110,150,118,54,45,	0,2410,3899,7020,16297,65540,104409,
#Partially deleted in new
chr2	70450172	70553826	chr2:70450172-70553826	1	-	70450858	70553767	0	6	694,110,150,118,54,99,	0,3045,6166,15443,64686,103555,
#Partially deleted in new
chr2	70450655	70553490	chr2:70450655-70553490	1	-	70450858	70553241	789624	6	211,110,150,118,54,307,	0,2562,5683,14960,64203,102528,
#Partially deleted in new
chr2	70450771	70553638	chr2:70450771-70553638	1	-	70450858	70553241	789624	6	95,110,150,121,54,455,	0,2446,5567,14844,64087,102412,
#Partially deleted in new
chr2	70456338	70553973	chr2:70456338-70553973	0	-	70456338	70553767	789624	4	150,118,54,246,	0,9277,58520,97389,
#Partially deleted in new
chr2	70456365	70553826	chr2:70456365-70553826	0	-	70456365	70456365	8553170	5	123,73,121,54,99,	0,5263,9250,58493,97362,
#Deleted in new
chr2	70467384	70468495	chr2:70467384-70468495	3	-	70467384	70467384	8553170	2	312,124,	0,987,
#Partially deleted in new
chr2	70514858	70554193	chr2:70514858-70554193	0	-	70514858	70514858	8553170	2	54,93,	0,39242,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr2	70607617	70768198	chr2:70607617-70768198	2	-	70663424	70706408	789624	21	216,171,276,108,146,492,129,148,90,120,258,177,99,144,150,81,152,139,217,119,313,	0,33719,37468,40305,41017,55626,65260,67060,69178,70140,71086,75973,80406,83168,84785,88103,88627,96703,98608,105448,160268,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	70656783	70768177	chr2:70656783-70768177	1	-	70663424	70706408	789624	16	6952,129,148,90,120,258,177,99,144,150,81,152,139,217,119,292,	0,16094,17894,20012,20974,21920,26807,31240,34002,35619,38937,39461,47537,49442,56282,111102,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	70662129	70767715	chr2:70662129-70767715	1	-	70663424	70706408	789624	16	1606,129,148,90,120,258,177,99,144,150,81,152,139,217,119,112,	0,10748,12548,14666,15628,16574,21461,25894,28656,30273,33591,34115,42191,44096,50936,105474,
#Partially deleted in new
chr2	70663482	70768177	chr2:70663482-70768177	1	-	70672901	70706408	789624	17	253,129,86,148,90,120,258,177,99,144,150,81,152,139,217,119,292,	0,9395,9758,11195,13313,14275,15221,20108,24541,27303,28920,32238,32762,40838,42743,49583,104403,
#Partially deleted in new
chr2	70663497	70673348	chr2:70663497-70673348	0	-	70663497	70663497	8553170	3	238,129,108,	0,9380,9743,
#Partially deleted in new
chr2	70673310	70706443	chr2:70673310-70706443	0	-	70673310	70706408	789624	9	16,148,90,24,6,81,152,139,218,	0,1367,3485,4447,19236,22410,22934,31010,32915,
#Partially deleted in new
chr2	70674677	70706408	chr2:70674677-70706408	0	-	70674677	70706408	789624	7	148,144,150,81,152,139,183,	0,16108,17725,21043,21567,29643,31548,
#Partially deleted in new
chr2	70675092	70768212	chr2:70675092-70768212	1	-	70676708	70706408	789624	13	1793,120,258,177,99,144,150,81,152,139,217,119,327,	0,2665,3611,8498,12931,15693,17310,20628,21152,29228,31133,37973,92793,
#Partially deleted in new
chr2	70676402	70768197	chr2:70676402-70768197	1	-	70676708	70767899	789624	12	483,120,258,177,99,144,150,81,152,139,217,312,	0,1355,2301,7188,11621,14383,16000,19318,19842,27918,29823,91483,
#Partially deleted in new
chr2	70687141	70691824	chr2:70687141-70691824	3	+	70687141	70687141	8553170	2	217,217,	0,4466,
#Partially deleted in new
chr2	70692427	70717778	chr2:70692427-70717778	0	-	70692427	70706408	789624	7	125,81,152,139,217,119,97,	0,3293,3817,11893,13798,20638,25254,
#Partially deleted in new
chr2	70696290	70767469	chr2:70696290-70767469	0	-	70696290	70706408	789624	5	106,139,217,119,140,	0,8030,9935,16775,71039,
#Partially deleted in new
chr2	70706356	70768196	chr2:70706356-70768196	0	-	70706356	70706408	789624	4	86,119,66,311,	0,6709,34984,61529,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	70706412	70768200	chr2:70706412-70768200	0	-	70706412	70706412	8553170	4	30,118,119,315,	0,4720,6653,61473,
#Partially deleted in new
chr2	70713069	70768225	chr2:70713069-70768225	0	-	70713069	70713069	8553170	3	115,96,340,	0,47536,54816,
#Partially deleted in new
chr2	70777309	70790643	chr2:70777309-70790643	3	-	70777366	70790638	789624	5	73,35,225,153,236,	0,327,8105,10339,13098,
#Deleted in new
chr2	70803156	70803426	chr2:70803156-70803426	7	+	70803156	70803156	16724991	1	270,	0,
#Partially deleted in new
chr2	70808642	70820600	chr2:70808642-70820600	3	-	70809270	70820523	789624	7	740,119,152,1119,90,117,138,	0,1096,3804,7351,10712,11132,11820,
#Partially deleted in new
chr2	70808812	70820547	chr2:70808812-70820547	1	-	70809096	70820523	789624	7	330,119,152,1119,90,117,85,	0,926,3634,7181,10542,10962,11650,
#Deleted in new
chr2	70810797	70811474	chr2:70810797-70811474	7	-	70810797	70810797	16724991	1	677,	0,
#Deleted in new
chr2	70830213	70835822	chr2:70830213-70835822	3	-	70831049	70835776	0	6	987,119,152,375,117,119,	0,1487,2686,3432,5277,5490,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	70887870	70889959	chr2:70887870-70889959	3	+	70887870	70887870	789624	4	310,63,113,139,	0,415,1605,1950,
#Deleted in new
chr2	70900154	70900351	chr2:70900154-70900351	3	+	70900154	70900154	8553170	1	197,	0,
#Partially deleted in new
chr2	70900589	70933446	chr2:70900589-70933446	3	+	70900621	70933204	789624	3	279,188,680,	0,20508,32177,
#Partially deleted in new
chr2	70900797	70965373	chr2:70900797-70965373	0	+	70900797	70924293	789624	15	71,188,63,56,99,94,78,140,102,98,124,83,105,130,416,	0,20300,23478,42860,57248,57535,58220,59141,60123,60798,61979,62774,63640,63938,64160,
#Partially deleted in new
chr2	70921206	70964458	chr2:70921206-70964458	0	+	70921206	70939486	789624	13	79,75,56,99,94,78,140,102,98,124,151,83,21,	0,18211,22451,36839,37126,37811,38732,39714,40389,41570,41955,42365,43231,
#Partially deleted in new
chr2	70935867	70965431	chr2:70935867-70965431	3	+	70935954	70965121	789624	14	205,56,99,94,78,140,102,98,124,151,83,105,130,474,	0,7790,22178,22465,23150,24071,25053,25728,26909,27294,27704,28570,28868,29090,
#Partially deleted in new
chr2	70935900	70962900	chr2:70935900-70962900	0	+	70935954	70962900	789624	9	172,56,99,94,78,140,123,98,124,	0,7757,22145,22432,23117,24038,25020,25695,26876,
#Partially deleted in new
chr2	70935920	70965401	chr2:70935920-70965401	1	+	70935954	70965121	789624	14	152,56,99,94,78,140,102,98,124,100,83,105,130,444,	0,7737,22125,22412,23097,24018,25000,25675,26856,27241,27651,28517,28815,29037,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	70939317	70995336	chr2:70939317-70995336	3	-	70942314	70994757	789624	6	3116,103,68,154,80,649,	0,49597,50431,52512,54378,55370,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	70941816	70948552	chr2:70941816-70948552	0	-	70941816	70941816	789624	2	617,326,	0,6410,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	70941826	70948610	chr2:70941826-70948610	3	-	70941826	70941826	789624	3	607,138,384,	0,5707,6400,
#Partially deleted in new
chr2	70943373	70961022	chr2:70943373-70961022	0	+	70943373	70943373	8553170	6	340,99,94,78,140,102,	0,14672,14959,15644,16565,17547,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	70947539	70994749	chr2:70947539-70994749	0	-	70948369	70994749	789624	4	132,149,80,62,	0,687,46156,47148,
#Deleted in new
chr2	70955898	70956234	chr2:70955898-70956234	7	-	70955898	70955898	16724991	1	336,	0,
#Partially deleted in new
chr2	70957770	70959966	chr2:70957770-70959966	0	+	70957770	70957770	8553170	4	374,94,78,28,	0,562,1247,2168,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	70959938	70961820	chr2:70959938-70961820	0	+	70959938	70959938	8553170	3	140,102,225,	0,982,1657,
#Deleted in new
chr2	70963621	70965119	chr2:70963621-70965119	0	+	70963621	70965119	789624	5	33,42,105,130,162,	0,448,816,1114,1336,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	70965583	70965867	chr2:70965583-70965867	3	+	70965583	70965583	8553170	1	284,	0,
#Partially deleted in new
chr2	70978379	70985499	chr2:70978379-70985499	3	+	70978645	70984612	789624	7	436,247,200,165,121,127,889,	0,717,1281,3556,4197,5743,6231,
#Partially deleted in new
chr2	70978451	70985450	chr2:70978451-70985450	1	+	70978645	70984612	789624	6	364,145,200,121,127,840,	0,747,1209,4125,5671,6159,
#Partially deleted in new
chr2	70978506	70985341	chr2:70978506-70985341	1	+	70978645	70985300	789624	6	309,145,200,165,121,731,	0,692,1154,3429,4070,6104,
#Partially deleted in new
chr2	70978611	70985339	chr2:70978611-70985339	1	+	70978645	70985300	789624	6	204,247,200,165,121,729,	0,485,1049,3324,3965,5999,
#Partially deleted in new
chr2	70979006	70982695	chr2:70979006-70982695	0	+	70979006	70979006	8553170	2	337,119,	0,3570,
#Partially deleted in new
chr2	70979010	70981967	chr2:70979010-70981967	0	+	70979010	70979010	8553170	3	333,200,32,	0,650,2925,
#Deleted in new
chr2	70982325	70984225	chr2:70982325-70984225	0	+	70982325	70982325	8553170	2	372,103,	0,1797,
#Partially deleted in new
chr2	70985937	70994945	chr2:70985937-70994945	3	-	70988599	70994757	789624	6	2778,103,68,154,80,258,	0,2977,3811,5892,7758,8750,
#Deleted in new
chr2	70985943	70989721	chr2:70985943-70989721	0	-	70985943	70985943	8553170	2	2772,807,	0,2971,
#Partially deleted in new
chr2	70988353	70994832	chr2:70988353-70994832	0	-	70989810	70994757	789624	5	362,103,68,80,145,	0,561,1395,5342,6334,
#Partially deleted in new
chr2	70988599	70994704	chr2:70988599-70994704	0	-	70988599	70988599	8553170	6	116,103,68,154,80,64,	0,315,1149,3230,5096,6041,
#Partially deleted in new
chr2	70989576	70994803	chr2:70989576-70994803	0	-	70989576	70989576	8553170	4	240,154,80,116,	0,2253,4119,5111,
#Partially deleted in new
chr2	70991788	70994873	chr2:70991788-70994873	0	-	70991788	70991788	8553170	3	195,80,186,	0,1907,2899,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	70994509	71002754	chr2:70994509-71002754	3	+	70994509	70994509	8553170	2	233,244,	0,8001,
#Partially deleted in new
chr2	71002530	71064743	chr2:71002530-71064743	3	-	71002530	71002530	8553170	4	58,252,199,61,	0,1138,2306,62152,
#Partially deleted in new
chr2	71029027	71029893	chr2:71029027-71029893	5	+	71029027	71029027	16724991	1	866,	0,
#Deleted in new
chr2	71037684	71038703	chr2:71037684-71038703	7	+	71037684	71037684	16724991	1	1019,	0,
#Deleted in new
chr2	71055526	71056003	chr2:71055526-71056003	7	+	71055526	71055526	16724991	1	477,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	71064343	71068381	chr2:71064343-71068381	0	+	71064343	71064343	8553170	3	156,119,187,	0,2510,3851,
#Deleted in new
chr2	71067518	71068125	chr2:71067518-71068125	3	-	71067518	71067518	8553170	1	607,	0,
#Deleted in new
chr2	71068277	71070619	chr2:71068277-71070619	0	+	71068277	71068277	8553170	2	435,118,	0,2224,
#Partially deleted in new
chr2	71068277	71078868	chr2:71068277-71078868	1	+	71068545	71078508	0	10	435,85,99,142,111,113,88,98,79,551,	0,2224,2463,3408,4363,5204,7277,8326,9280,10040,
#Partially deleted in new
chr2	71068300	71078868	chr2:71068300-71078868	1	+	71068545	71078508	0	10	412,85,99,142,111,113,88,98,79,551,	0,2201,2440,3385,4340,5181,7254,8303,9257,10017,
#Partially deleted in new
chr2	71068307	71076662	chr2:71068307-71076662	0	+	71072729	71076662	789624	7	29,85,99,111,113,88,59,	0,2194,2433,4333,5174,7247,8296,
#Partially deleted in new
chr2	71068315	71073594	chr2:71068315-71073594	0	+	71068545	71071698	789624	4	397,142,111,113,	0,3370,4325,5166,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	71068587	71079805	chr2:71068587-71079805	1	+	71070779	71078508	789624	9	125,99,142,111,113,88,98,79,1488,	0,2153,3098,4053,4894,6967,8016,8970,9730,
#Partially deleted in new
chr2	71068591	71078585	chr2:71068591-71078585	1	+	71072729	71078508	789624	7	121,111,113,88,98,79,268,	0,4049,4890,6963,8012,8966,9726,
#Partially deleted in new
chr2	71068618	71078641	chr2:71068618-71078641	1	+	71068683	71078508	789624	10	94,85,99,142,111,113,88,98,67,324,	0,1883,2122,3067,4022,4863,6936,7985,8951,9699,
#Partially deleted in new
chr2	71068621	71078565	chr2:71068621-71078565	3	+	71068683	71078508	0	10	91,85,99,142,111,113,88,98,79,248,	0,1880,2119,3064,4019,4860,6933,7982,8936,9696,
#Partially deleted in new
chr2	71068621	71073131	chr2:71068621-71073131	0	+	71068621	71068621	8553170	2	91,491,	0,4019,
#Partially deleted in new
chr2	71068630	71075807	chr2:71068630-71075807	0	+	71068630	71068630	8553170	4	82,111,113,253,	0,4010,4851,6924,
#Partially deleted in new
chr2	71068646	71078613	chr2:71068646-71078613	0	+	71068683	71072839	789624	10	66,85,99,142,111,769,88,98,79,296,	0,1855,2094,3039,3994,4179,6908,7957,8911,9671,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	71068649	71071019	chr2:71068649-71071019	0	+	71068649	71068649	8553170	2	63,518,	0,1852,
#Partially deleted in new
chr2	71068649	71078636	chr2:71068649-71078636	0	+	71068649	71068649	8553170	9	1937,99,142,111,113,88,98,79,319,	0,2091,3036,3991,4832,6905,7954,8908,9668,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	71068649	71071138	chr2:71068649-71071138	0	+	71068649	71068649	8553170	3	63,85,398,	0,1852,2091,
#Partially deleted in new
chr2	71068661	71072690	chr2:71068661-71072690	0	+	71070779	71072690	789624	5	400,85,99,142,50,	0,1840,2079,3024,3979,
#Partially deleted in new
chr2	71068664	71078620	chr2:71068664-71078620	0	+	71068664	71068664	8553170	8	48,85,99,142,954,1147,79,303,	0,1837,2076,3021,3976,6890,8893,9653,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	71068977	71078636	chr2:71068977-71078636	0	+	71068977	71068977	8553170	6	2850,954,88,98,79,319,	0,3663,6577,7626,8580,9340,
#Partially deleted in new
chr2	71070299	71075630	chr2:71070299-71075630	0	+	71070299	71070299	8553170	3	540,113,76,	0,3182,5255,
#Partially deleted in new
chr2	71070501	71072740	chr2:71070501-71072740	0	+	71070501	71070501	8553170	4	85,99,142,162,	0,239,1184,2077,
#Partially deleted in new
chr2	71070512	71077636	chr2:71070512-71077636	0	+	71070512	71075570	789624	8	74,99,142,111,113,81,98,79,	0,228,1173,2128,2969,5049,6091,7045,
#Partially deleted in new
chr2	71071548	71076641	chr2:71071548-71076641	0	+	71071548	71071548	8553170	5	279,111,113,88,38,	0,1092,1933,4006,5055,
#Partially deleted in new
chr2	71071790	71077605	chr2:71071790-71077605	0	+	71071790	71076697	789624	6	37,111,113,56,98,48,	0,850,1691,3764,4813,5767,
#Partially deleted in new
chr2	71072284	71075651	chr2:71072284-71075651	0	+	71072284	71072284	8553170	3	467,113,97,	0,1197,3270,
#Partially deleted in new
chr2	71073536	71078633	chr2:71073536-71078633	0	+	71073536	71078508	789624	3	58,79,316,	0,4021,4781,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	71074619	71078639	chr2:71074619-71078639	0	+	71074619	71074619	8553170	3	2082,79,322,	0,2938,3698,
#Partially deleted in new
chr2	71075415	71078354	chr2:71075415-71078354	0	+	71075415	71075415	8553170	4	227,98,79,37,	0,1188,2142,2902,
#Deleted in new
chr2	71077530	71078635	chr2:71077530-71078635	0	+	71077530	71077530	8553170	2	106,318,	0,787,
#Partially deleted in new
chr2	71109683	71130237	chr2:71109683-71130237	3	-	71109969	71130219	0	3	439,338,58,	0,14522,20496,
#Partially deleted in new
chr2	71109683	71124451	chr2:71109683-71124451	0	-	71109969	71124451	789624	2	439,84,	0,14684,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	71109813	71118384	chr2:71109813-71118384	0	-	71109813	71109813	8553170	5	309,96,122,69,37,	0,949,6959,7705,8534,
#Partially deleted in new
chr2	71124205	71130239	chr2:71124205-71130239	0	-	71124205	71124298	789624	3	338,101,60,	0,5511,5974,
#Partially deleted in new
chr2	71124205	71130214	chr2:71124205-71130214	0	-	71124205	71124298	789624	2	338,498,	0,5511,
#Partially deleted in new
chr2	71130313	71150101	chr2:71130313-71150101	3	+	71130665	71150015	789624	11	441,679,158,172,142,68,138,111,108,231,236,	0,2584,3634,4312,8176,9481,10918,14114,17685,18909,19552,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	71130631	71139425	chr2:71130631-71139425	1	+	71130665	71138780	789624	5	123,679,158,172,936,	0,2266,3316,3994,7858,
#Partially deleted in new
chr2	71130633	71133168	chr2:71130633-71133168	0	+	71130633	71130633	8553170	2	212,271,	0,2264,
#Partially deleted in new
chr2	71144239	71149287	chr2:71144239-71149287	0	+	71144239	71144239	8553170	3	299,108,65,	0,3759,4983,
#Partially deleted in new
chr2	71148105	71150101	chr2:71148105-71150101	0	+	71148105	71148105	8553170	2	1348,236,	0,1760,
#Deleted in new
chr2	71178586	71178773	chr2:71178586-71178773	7	+	71178586	71178586	16724991	1	187,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	71182738	71227083	chr2:71182738-71227083	3	-	71188478	71202589	789624	4	5797,177,149,156,	0,7106,19713,44189,
#Partially deleted in new
chr2	71276560	71365705	chr2:71276560-71365705	0	+	71364068	71365705	789624	5	194,62,39,299,277,	0,79158,86592,87393,88868,
#Partially deleted in new
chr2	71276592	71365488	chr2:71276592-71365488	0	+	71276638	71365488	789624	4	162,39,299,60,	0,86560,87361,88836,
#Partially deleted in new
chr2	71276644	71365613	chr2:71276644-71365613	0	+	71361666	71365613	789624	6	110,62,51,39,299,185,	0,79074,85000,86508,87309,88784,
#Partially deleted in new
chr2	71331727	71349545	chr2:71331727-71349545	0	+	71348954	71349545	789624	2	138,793,	0,17025,
#Partially deleted in new
chr2	71331759	71365538	chr2:71331759-71365538	0	+	71364068	71365538	789624	5	116,62,39,299,110,	0,23959,31393,32194,33669,
#Partially deleted in new
chr2	71331761	71365514	chr2:71331761-71365514	0	+	71364068	71365514	789624	5	104,62,39,299,86,	0,23957,31391,32192,33667,
#Partially deleted in new
chr2	71331763	71435061	chr2:71331763-71435061	1	+	71348954	71434807	789624	28	112,1519,62,39,299,278,147,123,59,53,51,72,87,69,41,132,129,42,135,126,38,1225,66,955,105,102,119,320,	0,16989,23955,31389,32190,33665,36618,38119,48458,48749,64377,66937,67795,68348,68714,70192,72106,73837,74364,76358,86838,91050,92886,94696,96783,99563,101401,102978,
#Partially deleted in new
chr2	71331763	71435061	chr2:71331763-71435061	3	+	71348954	71434807	789624	28	102,1845,62,39,299,278,147,123,59,53,51,72,87,69,41,132,129,42,135,126,38,1225,66,955,105,102,119,320,	0,16663,23955,31389,32190,33665,36618,38119,48458,48749,64377,66937,67795,68348,68714,70192,72106,73837,74364,76358,86838,91050,92886,94696,96783,99563,101401,102978,
#Partially deleted in new
chr2	71331765	71349141	chr2:71331765-71349141	0	+	71348954	71349141	789624	3	110,96,389,	0,2735,16987,
#Partially deleted in new
chr2	71331765	71349141	chr2:71331765-71349141	0	+	71348954	71349141	789624	3	100,96,389,	0,2735,16987,
#Partially deleted in new
chr2	71331781	71349042	chr2:71331781-71349042	0	+	71348954	71349042	789624	4	94,248,128,290,	0,1048,9928,16971,
#Partially deleted in new
chr2	71331781	71349063	chr2:71331781-71349063	0	+	71348954	71349063	789624	2	94,637,	0,16645,
#Partially deleted in new
chr2	71331781	71348838	chr2:71331781-71348838	0	+	71331781	71331781	8553170	3	84,96,412,	0,2719,16645,
#Partially deleted in new
chr2	71365428	71375335	chr2:71365428-71375335	0	+	71365428	71365428	8553170	4	278,147,123,26,	0,2953,4454,9881,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	71379515	71380720	chr2:71379515-71380720	0	+	71379515	71379515	8553170	2	765,208,	0,997,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	71379754	71379858	chr2:71379754-71379858	3	-	71379754	71379754	8553170	1	104,	0,
#Partially deleted in new
chr2	71380175	71398757	chr2:71380175-71398757	0	+	71380175	71380175	8553170	5	105,53,66,51,57,	0,337,662,15965,18525,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr2	71395718	71435058	chr2:71395718-71435058	0	+	71395718	71395718	8553170	18	473,72,87,69,41,132,129,42,135,126,38,1225,66,955,105,102,119,317,	0,2982,3840,4393,4759,6237,8151,9882,10409,12403,22883,27095,28931,30741,32828,35608,37446,39023,
#Partially deleted in new
chr2	71403849	71426606	chr2:71403849-71426606	0	+	71403849	71403849	8553170	7	149,42,135,126,38,66,147,	0,1751,2278,4272,14752,20800,22610,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	71407238	71435060	chr2:71407238-71435060	0	+	71407238	71407238	8553170	9	1541,38,1225,66,955,105,102,119,319,	0,11363,15575,17411,19221,21308,24088,25926,27503,
#Partially deleted in new
chr2	71418221	71435052	chr2:71418221-71435052	0	+	71418221	71418221	8553170	7	418,66,955,105,102,119,311,	0,6428,8238,10325,13105,14943,16520,
#Partially deleted in new
chr2	71426845	71435058	chr2:71426845-71435058	0	+	71426845	71434807	789624	4	569,102,119,317,	0,4481,6319,7896,
#Partially deleted in new
chr2	71427282	71435069	chr2:71427282-71435069	0	+	71427282	71433493	789624	6	132,105,102,119,60,328,	0,1264,4044,5882,6193,7459,
#Partially deleted in new
chr2	71427294	71428963	chr2:71427294-71428963	0	+	71427294	71427294	8553170	2	120,417,	0,1252,
#Partially deleted in new
chr2	71427349	71434869	chr2:71427349-71434869	0	+	71427349	71427349	8553170	5	65,121,102,119,128,	0,1181,3977,5815,7392,
#Partially deleted in new
chr2	71431022	71435058	chr2:71431022-71435058	0	+	71431022	71431022	8553170	3	406,119,317,	0,2142,3719,
#Partially deleted in new
chr2	71431182	71433566	chr2:71431182-71433566	0	+	71431182	71431182	8553170	2	246,402,	0,1982,
#Partially deleted in new
chr2	71453721	71686768	chr2:71453721-71686768	1	+	71453998	71686492	0	55	365,56,92,106,115,206,129,63,51,31,116,127,104,69,44,83,42,116,114,178,125,107,193,156,132,167,115,106,143,174,94,78,182,141,30,30,102,162,166,77,99,129,156,92,171,143,140,89,96,142,100,179,110,148,315,	0,27161,28157,49492,58085,59994,61901,62458,63267,66456,67067,72498,74576,81299,81546,85435,95628,97319,97885,99289,100085,102243,108030,110336,114229,114450,116098,116507,116877,120476,135871,136489,144842,146980,147777,149054,157523,157743,158919,159612,190243,202440,205156,206838,210546,211440,213654,215032,215390,215883,220475,225335,227279,228808,232732,
#Partially deleted in new
chr2	71453721	71686648	chr2:71453721-71686648	1	+	71453998	71686492	0	56	365,56,92,106,115,93,206,129,63,51,31,116,127,104,69,44,83,116,114,178,125,107,193,156,132,167,115,106,143,174,94,78,182,141,30,30,102,162,166,77,63,99,129,156,92,171,143,140,89,96,142,100,179,110,148,195,	0,27161,28157,49492,58085,59518,59994,61901,62458,63267,66456,67067,72498,74576,81299,81546,85435,97319,97885,99289,100085,102243,108030,110336,114229,114450,116098,116507,116877,120476,135871,136489,144842,146980,147777,149054,157523,157743,158919,159612,166825,190243,202440,205156,206838,210546,211440,213654,215032,215390,215883,220475,225335,227279,228808,232732,
#Partially deleted in new
chr2	71453721	71686648	chr2:71453721-71686648	1	+	71453998	71686492	0	55	365,56,92,106,115,93,206,129,63,51,31,116,127,104,69,44,83,116,114,178,125,107,193,156,132,167,115,106,143,174,94,78,182,141,30,30,102,162,166,77,99,129,156,92,171,143,140,89,96,142,100,179,110,148,195,	0,27161,28157,49492,58085,59518,59994,61901,62458,63267,66456,67067,72498,74576,81299,81546,85435,97319,97885,99289,100085,102243,108030,110336,114229,114450,116098,116507,116877,120476,135871,136489,144842,146980,147777,149054,157523,157743,158919,159612,190243,202440,205156,206838,210546,211440,213654,215032,215390,215883,220475,225335,227279,228808,232732,
#Partially deleted in new
chr2	71453721	71686648	chr2:71453721-71686648	3	+	71453998	71686492	0	56	365,56,92,106,115,93,206,129,63,51,31,116,127,104,69,44,83,42,116,114,178,125,107,193,156,132,167,115,106,143,174,94,78,182,141,30,30,102,162,166,77,99,129,156,92,171,143,140,89,96,142,100,179,110,148,195,	0,27161,28157,49492,58085,59518,59994,61901,62458,63267,66456,67067,72498,74576,81299,81546,85435,95628,97319,97885,99289,100085,102243,108030,110336,114229,114450,116098,116507,116877,120476,135871,136489,144842,146980,147777,149054,157523,157743,158919,159612,190243,202440,205156,206838,210546,211440,213654,215032,215390,215883,220475,225335,227279,228808,232732,
#Partially deleted in new
chr2	71453721	71686648	chr2:71453721-71686648	1	+	71453998	71686492	0	56	365,56,92,106,115,206,129,63,51,31,116,127,104,69,44,83,42,116,114,178,125,107,193,156,132,167,115,106,143,174,94,78,182,141,30,30,102,162,166,77,63,99,129,156,92,171,143,140,89,96,142,100,179,110,148,195,	0,27161,28157,49492,58085,59994,61901,62458,63267,66456,67067,72498,74576,81299,81546,85435,95628,97319,97885,99289,100085,102243,108030,110336,114229,114450,116098,116507,116877,120476,135871,136489,144842,146980,147777,149054,157523,157743,158919,159612,166825,190243,202440,205156,206838,210546,211440,213654,215032,215390,215883,220475,225335,227279,228808,232732,
#Partially deleted in new
chr2	71466701	71686648	chr2:71466701-71686648	1	+	71466842	71686492	0	55	232,56,92,106,115,206,129,63,51,31,116,127,104,69,44,83,42,116,114,178,125,107,193,156,132,167,115,106,143,174,94,78,182,141,30,30,102,162,166,77,99,129,156,92,171,143,140,89,96,142,100,179,110,148,195,	0,14181,15177,36512,45105,47014,48921,49478,50287,53476,54087,59518,61596,68319,68566,72455,82648,84339,84905,86309,87105,89263,95050,97356,101249,101470,103118,103527,103897,107496,122891,123509,131862,134000,134797,136074,144543,144763,145939,146632,177263,189460,192176,193858,197566,198460,200674,202052,202410,202903,207495,212355,214299,215828,219752,
#Partially deleted in new
chr2	71466701	71686648	chr2:71466701-71686648	1	+	71466842	71686492	0	56	232,56,92,106,115,206,129,63,51,31,116,127,104,69,44,83,42,116,114,178,125,107,193,156,132,167,115,106,143,174,94,78,182,141,30,30,102,162,166,77,63,99,129,156,92,171,143,140,89,96,142,100,179,110,148,195,	0,14181,15177,36512,45105,47014,48921,49478,50287,53476,54087,59518,61596,68319,68566,72455,82648,84339,84905,86309,87105,89263,95050,97356,101249,101470,103118,103527,103897,107496,122891,123509,131862,134000,134797,136074,144543,144763,145939,146632,153845,177263,189460,192176,193858,197566,198460,200674,202052,202410,202903,207495,212355,214299,215828,219752,
#Partially deleted in new
chr2	71466701	71686648	chr2:71466701-71686648	1	+	71466842	71686492	0	56	232,56,92,106,115,93,206,129,63,51,31,116,127,104,69,44,83,42,116,114,178,125,107,193,156,132,167,115,106,143,174,94,78,182,141,30,30,102,162,166,77,99,129,156,92,171,143,140,89,96,142,100,179,110,148,195,	0,14181,15177,36512,45105,46538,47014,48921,49478,50287,53476,54087,59518,61596,68319,68566,72455,82648,84339,84905,86309,87105,89263,95050,97356,101249,101470,103118,103527,103897,107496,122891,123509,131862,134000,134797,136074,144543,144763,145939,146632,177263,189460,192176,193858,197566,198460,200674,202052,202410,202903,207495,212355,214299,215828,219752,
#Partially deleted in new
chr2	71466701	71686648	chr2:71466701-71686648	1	+	71466842	71686492	0	55	232,56,92,106,115,206,129,63,51,31,116,127,104,69,44,83,116,114,178,125,107,193,156,132,167,115,106,143,174,94,78,182,141,30,30,102,162,166,77,63,99,129,156,92,171,143,140,89,96,142,100,179,110,148,195,	0,14181,15177,36512,45105,47014,48921,49478,50287,53476,54087,59518,61596,68319,68566,72455,84339,84905,86309,87105,89263,95050,97356,101249,101470,103118,103527,103897,107496,122891,123509,131862,134000,134797,136074,144543,144763,145939,146632,153845,177263,189460,192176,193858,197566,198460,200674,202052,202410,202903,207495,212355,214299,215828,219752,
#Partially deleted in new
chr2	71466701	71686648	chr2:71466701-71686648	1	+	71466842	71686492	0	56	232,56,92,106,115,93,206,129,63,51,31,116,127,104,69,44,83,116,114,178,125,107,193,156,132,167,115,106,143,174,94,78,182,141,30,30,102,162,166,77,63,99,129,156,92,171,143,140,89,96,142,100,179,110,148,195,	0,14181,15177,36512,45105,46538,47014,48921,49478,50287,53476,54087,59518,61596,68319,68566,72455,84339,84905,86309,87105,89263,95050,97356,101249,101470,103118,103527,103897,107496,122891,123509,131862,134000,134797,136074,144543,144763,145939,146632,153845,177263,189460,192176,193858,197566,198460,200674,202052,202410,202903,207495,212355,214299,215828,219752,
#Partially deleted in new
chr2	71466701	71686648	chr2:71466701-71686648	1	+	71466842	71686492	0	55	232,56,92,106,115,93,206,129,63,51,31,116,127,104,69,44,83,116,114,178,125,107,193,156,132,167,115,106,143,174,94,78,182,141,30,30,102,162,166,77,99,129,156,92,171,143,140,89,96,142,100,179,110,148,195,	0,14181,15177,36512,45105,46538,47014,48921,49478,50287,53476,54087,59518,61596,68319,68566,72455,84339,84905,86309,87105,89263,95050,97356,101249,101470,103118,103527,103897,107496,122891,123509,131862,134000,134797,136074,144543,144763,145939,146632,177263,189460,192176,193858,197566,198460,200674,202052,202410,202903,207495,212355,214299,215828,219752,
#Deleted in new
chr2	71570137	71570916	chr2:71570137-71570916	0	+	71570137	71570137	8553170	2	197,318,	0,461,
#Partially deleted in new
chr2	71576267	71600840	chr2:71576267-71600840	0	+	71576267	71576267	8553170	5	176,94,78,182,139,	0,13325,13943,22296,24434,
#Partially deleted in new
chr2	71576898	71686763	chr2:71576898-71686763	0	+	71576898	71576898	8553170	26	233,94,78,182,141,30,30,102,162,166,77,99,129,156,92,171,143,140,89,96,142,100,179,110,148,310,	0,12694,13312,21665,23803,24600,25877,34346,34566,35742,36435,67066,79263,81979,83661,87369,88263,90477,91855,92213,92706,97298,102158,104102,105631,109555,
#Partially deleted in new
chr2	71588704	71600842	chr2:71588704-71600842	0	+	71588704	71588704	8553170	5	69,94,78,182,141,	0,888,1506,9859,11997,
#Partially deleted in new
chr2	71601271	71612689	chr2:71601271-71612689	0	+	71601271	71601271	8553170	5	257,30,102,162,49,	0,1504,9973,10193,11369,
#Partially deleted in new
chr2	71601295	71612713	chr2:71601295-71612713	0	+	71601295	71601295	8553170	5	233,30,102,100,73,	0,1480,9949,10231,11345,
#Partially deleted in new
chr2	71602683	71613376	chr2:71602683-71613376	0	+	71602683	71602683	8553170	5	122,102,162,166,43,	0,8561,8781,9957,10650,
#Partially deleted in new
chr2	71610778	71644033	chr2:71610778-71644033	0	+	71610778	71610778	8553170	7	139,102,162,166,77,63,69,	0,466,686,1862,2555,9768,33186,
#Deleted in new
chr2	71984181	71984434	chr2:71984181-71984434	7	-	71984181	71984181	16724991	1	253,	0,
#Partially deleted in new
chr2	72129237	72148038	chr2:72129237-72148038	3	-	72132226	72147834	789624	6	3382,285,156,276,225,408,	0,3785,5523,5906,14751,18393,
#Partially deleted in new
chr2	72129237	72147862	chr2:72129237-72147862	1	-	72132226	72147834	789624	5	3382,285,156,276,232,	0,3785,5523,5906,18393,
#Partially deleted in new
chr2	72129392	72143084	chr2:72129392-72143084	1	-	72132226	72135275	789624	5	3227,285,156,276,81,	0,3630,5368,5751,13611,
#Partially deleted in new
chr2	72134850	72147862	chr2:72134850-72147862	0	-	72134850	72147834	789624	3	66,276,232,	0,293,12780,
#Partially deleted in new
chr2	72135279	72144415	chr2:72135279-72144415	0	-	72135279	72144366	789624	2	140,427,	0,8709,
#Partially deleted in new
chr2	72175983	72826041	chr2:72175983-72826041	3	-	72179334	72825910	789624	22	3478,113,74,142,180,135,112,110,106,98,72,121,47,84,69,177,205,46,91,48,166,244,	0,8091,158963,203745,289176,304632,316334,319446,320470,322470,323917,337148,338650,339059,383469,399508,542119,555023,555171,557087,565320,649814,
#Partially deleted in new
chr2	72179014	72354278	chr2:72179014-72354278	0	-	72179014	72179014	8553170	4	447,113,74,61,	0,5060,155932,175203,
#Partially deleted in new
chr2	72179128	72335289	chr2:72179128-72335289	0	-	72179128	72179128	8553170	4	333,113,74,43,	0,4946,155818,156118,
#Partially deleted in new
chr2	72179172	72263437	chr2:72179172-72263437	0	-	72179172	72179172	8553170	3	289,113,160,	0,4902,84105,
#Partially deleted in new
chr2	72179308	72826019	chr2:72179308-72826019	1	-	72179334	72825910	789624	23	153,12,113,74,142,180,135,112,110,106,98,72,121,47,84,69,177,205,46,91,48,166,222,	0,3585,4766,155638,200420,285851,301307,313009,316121,317145,319145,320592,333823,335325,335734,380144,396183,538794,551698,551846,553762,561995,646489,
#Deleted in new
chr2	72288784	72289110	chr2:72288784-72289110	7	+	72288784	72288784	16724991	1	326,	0,
#Partially deleted in new
chr2	72379808	72495539	chr2:72379808-72495539	0	-	72379808	72379808	8553170	4	62,180,112,110,	0,85351,112509,115621,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr2	72461475	72826041	chr2:72461475-72826041	1	-	72465093	72825910	789624	18	3864,135,112,110,106,98,72,121,47,84,69,177,205,46,91,48,166,244,	0,19140,30842,33954,34978,36978,38425,51656,53158,53567,97977,114016,256627,269531,269679,271595,279828,364322,
#Partially deleted in new
chr2	72496453	72826005	chr2:72496453-72826005	0	-	72733108	72825910	789624	13	106,98,72,121,47,84,69,177,205,46,91,48,208,	0,2000,3447,16678,18180,18589,62999,79038,221649,234553,234701,236617,329344,
#Partially deleted in new
chr2	72499927	72515754	chr2:72499927-72515754	0	-	72499927	72499927	8553170	5	45,121,47,84,319,	0,13204,14706,15115,15508,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	72721805	72722003	chr2:72721805-72722003	3	+	72721805	72721805	8553170	1	198,	0,
#Deleted in new
chr2	72760533	72760602	chr2:72760533-72760602	3	+	72760533	72760533	8553170	1	69,	0,
#Partially deleted in new
chr2	72887359	72892158	chr2:72887359-72892158	3	+	72887432	72891537	0	3	377,291,812,	0,954,3987,
#Partially deleted in new
chr2	72887381	72891753	chr2:72887381-72891753	0	+	72887381	72887381	8553170	3	355,185,407,	0,1038,3965,
#Partially deleted in new
chr2	72916259	72934328	chr2:72916259-72934328	1	+	72916683	72933854	789624	3	801,185,542,	0,8049,17527,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	72917474	72934891	chr2:72917474-72934891	3	+	72917852	72933954	789624	3	898,185,1105,	0,6834,16312,
#Deleted in new
chr2	72918180	72925541	chr2:72918180-72925541	0	+	72918218	72925541	789624	3	192,185,103,	0,6128,7258,
#Deleted in new
chr2	72923413	72934364	chr2:72923413-72934364	0	+	72923413	72923413	8553170	3	308,185,578,	0,895,10373,
#Deleted in new
chr2	72923987	72934239	chr2:72923987-72934239	0	+	72923987	72923987	8553170	2	506,453,	0,9799,
#Deleted in new
chr2	72932973	72934355	chr2:72932973-72934355	3	-	72932973	72932973	8553170	2	157,316,	0,1066,
#Deleted in new
chr2	72933171	72936071	chr2:72933171-72936071	0	+	72933171	72933171	8553170	1	2900,	0,
#Partially deleted in new
chr2	72942035	73071836	chr2:72942035-73071836	3	-	72945021	73071705	789624	14	3064,118,86,116,91,66,57,54,26,55,27,78,69,233,	0,19095,26412,29534,46222,56913,58395,59489,78203,80486,81152,98818,116492,129568,
#Partially deleted in new
chr2	72942035	73059180	chr2:72942035-73059180	0	-	72942035	72942035	8553170	8	3064,86,26,55,27,78,69,173,	0,26412,78203,80486,81152,98818,116492,116972,
#Partially deleted in new
chr2	72942035	73059172	chr2:72942035-73059172	0	-	72942035	72942035	8553170	14	3064,118,86,116,91,66,57,54,26,55,27,78,69,165,	0,19095,26412,29534,46222,56913,58395,59489,78203,80486,81152,98818,116492,116972,
#Partially deleted in new
chr2	72944602	72981117	chr2:72944602-72981117	0	-	72944602	72944602	8553170	4	497,86,116,109,	0,23845,26967,36406,
#Partially deleted in new
chr2	72944739	72988348	chr2:72944739-72988348	0	-	72944739	72944739	8553170	6	360,124,118,86,116,91,	0,12240,16391,23708,26830,43518,
#Partially deleted in new
chr2	72944739	72981234	chr2:72944739-72981234	0	-	72944739	72944739	8553170	5	360,118,86,116,226,	0,16391,23708,26830,36269,
#Partially deleted in new
chr2	72944863	73071673	chr2:72944863-73071673	0	-	72945021	73071673	789624	12	236,86,91,66,57,54,26,55,27,78,69,70,	0,23584,43394,54085,55567,56661,75375,77658,78324,95990,113664,126740,
#Partially deleted in new
chr2	72945021	73071724	chr2:72945021-73071724	1	-	72945080	73071705	789624	12	78,118,91,66,57,54,26,55,27,78,69,121,	0,16109,43236,53927,55409,56503,75217,77500,78166,95832,113506,126582,
#Partially deleted in new
chr2	72961201	72994964	chr2:72961201-72994964	0	-	72961201	72961201	8553170	6	47,87,86,116,91,119,	0,6035,7246,10368,27056,33644,
#Partially deleted in new
chr2	72968446	73020839	chr2:72968446-73020839	0	-	72968446	72968446	8553170	8	87,116,91,66,57,54,26,78,	0,3123,19811,30502,31984,33078,51792,52315,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	72973180	73071728	chr2:72973180-73071728	0	-	72973180	72973180	8553170	11	247,91,66,57,54,26,55,27,78,69,125,	0,15077,25768,27250,28344,47058,49341,50007,67673,85347,98423,
#Partially deleted in new
chr2	72988291	73044615	chr2:72988291-73044615	0	-	72988291	72988291	8553170	9	57,66,57,54,26,55,27,78,112,	0,10657,12139,13233,31947,34230,34896,52562,56212,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	72996511	73071709	chr2:72996511-73071709	0	-	73040890	73071705	789624	9	2503,57,54,26,27,78,55,69,106,	0,3919,5013,23727,26676,44342,45095,62016,75092,
#Partially deleted in new
chr2	72998950	73071725	chr2:72998950-73071725	0	-	72998950	73071705	789624	8	64,57,46,26,27,78,69,122,	0,1480,2578,21288,24237,41903,59577,72653,
#Partially deleted in new
chr2	72998956	73059176	chr2:72998956-73059176	0	-	72998956	72998956	8553170	9	58,57,54,26,55,27,78,69,83,	0,1474,2568,21282,23565,24231,41897,59571,60137,
#Partially deleted in new
chr2	73001526	73071330	chr2:73001526-73071330	0	-	73001526	73001526	8553170	7	52,26,55,27,78,69,291,	0,18712,20995,21661,39327,57001,69513,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	73019446	73071289	chr2:73019446-73071289	0	-	73019446	73019446	8553170	5	818,55,27,78,830,	0,3075,3741,21407,51013,
#Partially deleted in new
chr2	73020085	73075619	chr2:73020085-73075619	0	-	73020085	73020085	8553170	6	179,55,27,78,69,39,	0,2436,3102,20768,38442,55495,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	73049085	73071266	chr2:73049085-73071266	0	-	73049085	73049085	8553170	3	814,69,807,	0,9442,21374,
#Partially deleted in new
chr2	73053328	73071662	chr2:73053328-73071662	0	-	73053328	73053328	8553170	3	223,69,59,	0,5199,18275,
#Deleted in new
chr2	73058076	73059158	chr2:73058076-73059158	0	-	73058076	73058076	8553170	2	520,151,	0,931,
#Partially deleted in new
chr2	73073381	73113018	chr2:73073381-73113018	3	-	73075520	73112777	789624	5	2343,190,700,437,672,	0,2611,14668,15497,38965,
#Partially deleted in new
chr2	73073381	73112783	chr2:73073381-73112783	1	-	73075520	73112777	789624	6	2343,190,2013,700,437,437,	0,2611,6269,14668,15497,38965,
#Partially deleted in new
chr2	73073383	73084396	chr2:73073383-73084396	0	-	73073383	73073383	8553170	3	2341,190,279,	0,2609,10734,
#Partially deleted in new
chr2	73073383	73089655	chr2:73073383-73089655	0	-	73073383	73073383	8553170	4	2341,190,700,777,	0,2609,14666,15495,
#Partially deleted in new
chr2	73081203	73088328	chr2:73081203-73088328	0	-	73081203	73081203	8553170	2	326,279,	0,6846,
#Partially deleted in new
chr2	73088941	73156721	chr2:73088941-73156721	0	-	73088941	73088941	8553170	2	374,84,	0,67696,
#Deleted in new
chr2	73113017	73113630	chr2:73113017-73113630	3	+	73113017	73113017	8553170	2	189,231,	0,382,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	73113163	73115907	chr2:73113163-73115907	0	+	73113163	73113163	8553170	1	2744,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	73202257	73212513	chr2:73202257-73212513	3	+	73202666	73210929	789624	3	791,215,1743,	0,6142,8513,
#Partially deleted in new
chr2	73214221	73227237	chr2:73214221-73227237	3	+	73214266	73225946	789624	13	141,109,140,122,70,105,63,71,107,57,95,71,1442,	0,4639,5829,6439,6943,7604,8533,8814,9204,9725,10644,11409,11574,
#Partially deleted in new
chr2	73214221	73221213	chr2:73214221-73221213	0	+	73214266	73219992	789624	5	141,109,239,122,49,	0,4639,5730,6439,6943,
#Partially deleted in new
chr2	73214237	73223106	chr2:73214237-73223106	0	+	73214266	73220077	789624	8	125,109,121,122,70,105,63,71,	0,4623,5832,6423,6927,7588,8517,8798,
#Partially deleted in new
chr2	73214266	73219992	chr2:73214266-73219992	1	+	73214266	73219992	789624	3	96,109,41,	0,4594,5685,
#Partially deleted in new
chr2	73214566	73221194	chr2:73214566-73221194	0	+	73214734	73221194	789624	5	183,109,140,122,30,	0,4294,5484,6094,6598,
#Partially deleted in new
chr2	73214589	73221922	chr2:73214589-73221922	0	+	73214589	73214589	8553170	6	116,109,239,122,70,97,	0,4271,5362,6071,6575,7236,
#Deleted in new
chr2	73219916	73220721	chr2:73219916-73220721	0	+	73219916	73219916	8553170	2	274,61,	0,744,
#Deleted in new
chr2	73221175	73223167	chr2:73221175-73223167	0	+	73221175	73221175	8553170	4	59,105,63,132,	0,650,1579,1860,
#Deleted in new
chr2	73225221	73225881	chr2:73225221-73225881	0	+	73225221	73225221	8553170	2	480,86,	0,574,
#Partially deleted in new
chr2	73228005	73233228	chr2:73228005-73233228	3	-	73228453	73233160	789624	5	569,168,110,101,135,	0,789,1455,2107,5088,
#Partially deleted in new
chr2	73228330	73233238	chr2:73228330-73233238	0	-	73228330	73228330	8553170	4	244,110,101,145,	0,1130,1782,4763,
#Partially deleted in new
chr2	73229798	73233229	chr2:73229798-73233229	0	-	73229798	73229798	8553170	2	415,136,	0,3295,
#Partially deleted in new
chr2	73233419	73243108	chr2:73233419-73243108	0	+	73233419	73233419	8553170	5	94,96,154,107,105,	0,2130,6223,7017,9584,
#Partially deleted in new
chr2	73233428	73244630	chr2:73233428-73244630	0	+	73233428	73233428	8553170	6	85,154,107,126,53,87,	0,6214,7008,9575,10568,11115,
#Partially deleted in new
chr2	73233444	73240548	chr2:73233444-73240548	0	+	73233444	73233444	8553170	4	69,260,154,112,	0,5627,6198,6992,
#Partially deleted in new
chr2	73233458	73243082	chr2:73233458-73243082	0	+	73233458	73233458	8553170	5	55,136,154,107,79,	0,4093,6184,6978,9545,
#Partially deleted in new
chr2	73234235	73253021	chr2:73234235-73253021	1	+	73239768	73252861	789624	13	149,96,154,107,126,53,172,165,189,98,133,207,382,	0,1314,5407,6201,8768,9761,10308,13526,14755,15583,16070,16990,18404,
#Partially deleted in new
chr2	73234235	73253021	chr2:73234235-73253021	1	+	73234378	73252861	789624	10	149,126,53,172,165,189,98,133,207,382,	0,8768,9761,10308,13526,14755,15583,16070,16990,18404,
#Partially deleted in new
chr2	73234237	73253004	chr2:73234237-73253004	3	+	73234378	73252861	789624	12	147,154,107,126,53,172,165,189,98,133,207,365,	0,5405,6199,8766,9759,10306,13524,14753,15581,16068,16988,18402,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	73234268	73244511	chr2:73234268-73244511	0	+	73234268	73234268	8553170	5	116,154,107,126,515,	0,5374,6168,8735,9728,
#Partially deleted in new
chr2	73234306	73240147	chr2:73234306-73240147	0	+	73234306	73234306	8553170	2	78,505,	0,5336,
#Partially deleted in new
chr2	73234307	73253004	chr2:73234307-73253004	1	+	73234378	73252861	789624	7	77,165,189,98,133,207,365,	0,13454,14683,15511,15998,16918,18332,
#Partially deleted in new
chr2	73234307	73244029	chr2:73234307-73244029	0	+	73239768	73244029	789624	6	77,96,154,107,126,33,	0,1242,5335,6129,8696,9689,
#Partially deleted in new
chr2	73234308	73247789	chr2:73234308-73247789	0	+	73234378	73244004	789624	6	76,154,84,53,172,28,	0,5334,8737,9688,10235,13453,
#Partially deleted in new
chr2	73234308	73243193	chr2:73234308-73243193	0	+	73234308	73234308	8553170	4	76,154,107,190,	0,5334,6128,8695,
#Partially deleted in new
chr2	73234335	73249844	chr2:73234335-73249844	0	+	73234335	73234335	8553170	7	49,157,53,172,165,189,26,	0,8637,9661,10208,13426,14655,15483,
#Partially deleted in new
chr2	73239100	73243130	chr2:73239100-73243130	0	+	73239100	73239100	8553170	4	179,154,107,127,	0,542,1336,3903,
#Partially deleted in new
chr2	73239544	73243134	chr2:73239544-73243134	1	+	73239544	73243134	789624	3	6,154,89,	0,98,3501,
#Partially deleted in new
chr2	73243845	73249061	chr2:73243845-73249061	0	+	73243845	73243845	8553170	4	204,172,165,71,	0,698,3916,5145,
#Partially deleted in new
chr2	73254681	73269630	chr2:73254681-73269630	1	-	73258981	73269630	789624	12	4363,116,159,119,96,153,116,242,359,74,226,905,	0,4499,5707,6058,8531,8996,9256,9596,10600,11211,11775,14044,
#Partially deleted in new
chr2	73254689	73284431	chr2:73254689-73284431	3	-	73258981	73269630	789624	13	4355,116,159,119,96,153,116,242,359,74,226,1043,278,	0,4491,5699,6050,8523,8988,9248,9588,10592,11203,11767,14036,29464,
#Partially deleted in new
chr2	73258605	73284310	chr2:73258605-73284310	1	-	73258981	73269630	789624	13	439,116,159,119,96,153,116,242,359,74,226,1043,151,	0,575,1783,2134,4607,5072,5332,5672,6676,7287,7851,10120,25554,
#Deleted in new
chr2	73265482	73266804	chr2:73265482-73266804	0	-	73265482	73265482	8553170	3	158,74,348,	0,410,974,
#Partially deleted in new
chr2	73271196	73284431	chr2:73271196-73284431	0	-	73271196	73271196	8553170	4	314,116,115,272,	0,990,1818,12963,
#Deleted in new
chr2	73290928	73293705	chr2:73290928-73293705	1	-	73291456	73293317	789624	2	1853,524,	0,2253,
#Deleted in new
chr2	73290929	73293701	chr2:73290929-73293701	3	-	73291456	73293626	789624	2	1852,520,	0,2252,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	73298682	73298787	chr2:73298682-73298787	3	+	73298682	73298682	8553170	1	105,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	73352609	73385677	chr2:73352609-73385677	3	-	73352609	73352609	8553170	4	173,73,177,58,	0,19544,20191,33010,
#Deleted in new
chr2	73370018	73370892	chr2:73370018-73370892	7	+	73370018	73370018	16724991	1	874,	0,
#Partially deleted in new
chr2	73385757	73609715	chr2:73385757-73609715	1	+	73385868	73609612	789624	22	435,196,118,473,101,94,6108,134,1865,242,126,171,135,171,1163,121,204,242,184,64,100,148,	0,33365,37099,38672,40695,46440,62202,69404,103876,134017,149066,164509,171462,173214,186504,213643,214920,215437,216427,217483,222717,223810,
#Partially deleted in new
chr2	73385757	73609919	chr2:73385757-73609919	3	+	73385868	73609612	789624	23	435,126,196,118,473,101,94,6108,134,1865,242,126,171,135,171,1163,121,204,242,184,64,100,352,	0,22864,33365,37099,38672,40695,46440,62202,69404,103876,134017,149066,164509,171462,173214,186504,213643,214920,215437,216427,217483,222717,223810,
#Partially deleted in new
chr2	73385868	73573577	chr2:73385868-73573577	1	+	73385868	73573457	789624	16	324,126,196,118,473,101,94,6108,134,1865,242,126,171,135,171,1316,	0,22753,33254,36988,38561,40584,46329,62091,69293,103765,133906,148955,164398,171351,173103,186393,
#Partially deleted in new
chr2	73451696	73573580	chr2:73451696-73573580	0	+	73451696	73519816	789624	9	2371,134,525,242,126,171,135,171,1319,	0,3465,37937,68078,83127,98570,105523,107275,120565,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	73452724	73603859	chr2:73452724-73603859	0	+	73452724	73452724	8553170	14	1343,134,1865,242,126,171,135,171,1163,121,204,242,184,619,	0,2437,36909,67050,82099,97542,104495,106247,119537,146676,147953,148470,149460,150516,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	73456763	73459482	chr2:73456763-73459482	3	+	73456763	73456763	789624	2	563,1542,	0,1177,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	73469524	73471030	chr2:73469524-73471030	3	+	73469524	73469524	8553170	1	1506,	0,
#Partially deleted in new
chr2	73519944	73557260	chr2:73519944-73557260	0	+	73519944	73519944	8553170	3	72,126,41,	0,14879,37275,
#Partially deleted in new
chr2	73600834	73608516	chr2:73600834-73608516	0	+	73600834	73600834	8553170	6	47,242,184,64,61,42,	0,360,1350,2406,3096,7640,
#Partially deleted in new
chr2	73603298	73610793	chr2:73603298-73610793	0	+	73603298	73609612	789624	4	6,100,115,357,	0,5176,6269,7138,
#Partially deleted in new
chr2	73640831	73642393	chr2:73640831-73642393	3	-	73640944	73641628	789624	2	871,76,	0,1486,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	73644918	73685576	chr2:73644918-73685576	7	+	73644918	73644918	16724991	7	236,71,187,243,184,64,616,	0,26161,27390,27889,28894,29923,40042,
#Partially deleted in new
chr2	73671029	73685085	chr2:73671029-73685085	5	+	73671029	73671029	16724991	6	121,187,241,181,64,127,	0,1279,1778,2783,3811,13929,
#Deleted in new
chr2	73700575	73701340	chr2:73700575-73701340	3	-	73700626	73701305	789624	1	765,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	73729103	73737335	chr2:73729103-73737335	0	-	73729103	73729103	8553170	4	202,177,123,34,	0,1456,3059,8198,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	73729168	73737375	chr2:73729168-73737375	0	-	73729168	73729168	8553170	5	137,177,123,64,74,	0,1391,2994,5359,8133,
#Partially deleted in new
chr2	73729829	73737386	chr2:73729829-73737386	3	-	73729942	73734569	0	5	200,177,123,163,85,	0,730,2333,4599,7472,
#Deleted in new
chr2	73729889	73731149	chr2:73729889-73731149	0	-	73729889	73729889	8553170	2	140,590,	0,670,
#Partially deleted in new
chr2	73730263	73737340	chr2:73730263-73737340	0	-	73730263	73730263	8553170	4	473,123,163,39,	0,1899,4165,7038,
#Partially deleted in new
chr2	73730584	73737386	chr2:73730584-73737386	0	-	73730584	73730584	8553170	4	152,123,61,85,	0,1578,3943,6717,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	73750255	73750786	chr2:73750255-73750786	3	-	73750255	73750255	8553170	1	531,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	73761268	73761781	chr2:73761268-73761781	3	-	73761268	73761268	8553170	1	513,	0,
#Partially deleted in new
chr2	73762183	73780157	chr2:73762183-73780157	3	-	73762660	73780115	0	9	676,177,76,47,61,124,132,76,284,	0,4234,4644,4977,7081,11616,12729,16117,17690,
#Partially deleted in new
chr2	73762593	73779878	chr2:73762593-73779878	0	-	73762593	73762593	8553170	8	266,76,47,61,124,132,76,5,	0,4234,4567,6671,11206,12319,15707,17280,
#Partially deleted in new
chr2	73766867	73779582	chr2:73766867-73779582	0	-	73766867	73766867	8553170	7	36,47,61,124,132,76,112,	0,293,2397,6932,8045,11433,12603,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	73767418	73780121	chr2:73767418-73780121	1	-	73768765	73780115	0	6	1534,61,124,132,76,248,	0,1846,6381,7494,10882,12455,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	73773252	73779968	chr2:73773252-73779968	0	-	73773471	73779968	789624	5	245,124,132,76,95,	0,547,1660,5048,6621,
#Partially deleted in new
chr2	73784188	73817147	chr2:73784188-73817147	3	+	73784309	73816992	789624	3	218,750,2077,	0,29288,30882,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	73828915	73867168	chr2:73828915-73867168	1	+	73830856	73862259	0	10	81,215,76,96,367,125,138,113,100,4966,	0,1929,15897,16251,18471,20447,21460,30338,31136,33287,
#Partially deleted in new
chr2	73828961	73873633	chr2:73828961-73873633	3	+	73830856	73862259	0	11	35,215,76,96,367,125,138,113,100,102,282,	0,1883,15851,16205,18425,20401,21414,30292,31090,33241,44390,
#Partially deleted in new
chr2	73828966	73847423	chr2:73828966-73847423	0	+	73830856	73847423	789624	6	30,106,215,76,96,37,	0,438,1878,15846,16200,18420,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	73828986	73867168	chr2:73828986-73867168	1	+	73830856	73862259	0	11	84,106,215,76,96,367,125,138,113,100,4966,	0,418,1858,15826,16180,18400,20376,21389,30267,31065,33216,
#Partially deleted in new
chr2	73828986	73850462	chr2:73828986-73850462	0	+	73830856	73850462	789624	8	84,106,215,76,96,367,125,87,	0,418,1858,15826,16180,18400,20376,21389,
#Partially deleted in new
chr2	73828989	73847501	chr2:73828989-73847501	0	+	73830856	73847501	789624	5	81,215,76,96,115,	0,1855,15823,16177,18397,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	73829019	73867172	chr2:73829019-73867172	1	+	73830856	73862259	0	10	491,215,76,96,367,125,138,113,100,4970,	0,1825,15793,16147,18367,20343,21356,30234,31032,33183,
#Partially deleted in new
chr2	73829030	73849488	chr2:73829030-73849488	1	+	73830856	73849431	789624	7	40,106,215,76,96,186,126,	0,374,1814,15782,16136,18356,20332,
#Partially deleted in new
chr2	73844633	73849451	chr2:73844633-73849451	0	+	73844633	73844633	8553170	4	403,96,367,89,	0,533,2753,4729,
#Partially deleted in new
chr2	73850374	73862806	chr2:73850374-73862806	0	+	73850374	73850374	8553170	5	139,113,100,56,604,	0,8879,9677,10159,11828,
#Partially deleted in new
chr2	73860076	73873659	chr2:73860076-73873659	0	+	73860076	73860076	8553170	4	75,102,210,308,	0,2126,10066,13275,
#Partially deleted in new
chr2	73877565	73878862	chr2:73877565-73878862	7	+	73877565	73877565	16724991	2	265,262,	0,1035,
#Partially deleted in new
chr2	73892313	73919675	chr2:73892313-73919675	0	+	73901311	73908352	789624	10	163,108,162,129,494,85,162,192,182,244,	0,630,8962,10046,15976,16741,21171,22366,24270,27118,
#Partially deleted in new
chr2	73892950	73902734	chr2:73892950-73902734	0	+	73892950	73892950	8553170	3	101,162,375,	0,8325,9409,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	73892966	73919865	chr2:73892966-73919865	1	+	73901311	73919575	789624	8	85,162,111,85,162,192,182,434,	0,8309,15706,16088,20518,21713,23617,26465,
#Partially deleted in new
chr2	73892966	73913592	chr2:73892966-73913592	0	+	73901311	73901470	789624	5	85,205,111,85,108,	0,8309,15706,16088,20518,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	73892978	73919865	chr2:73892978-73919865	3	+	73901311	73919575	789624	9	73,162,129,111,85,162,192,182,434,	0,8297,9381,15694,16076,20506,21701,23605,26453,
#Partially deleted in new
chr2	73892981	73903189	chr2:73892981-73903189	1	+	73901311	73902728	789624	4	70,162,129,566,	0,8294,9378,9642,
#Partially deleted in new
chr2	73892981	73908851	chr2:73892981-73908851	0	+	73901311	73908851	789624	4	70,162,129,179,	0,8294,9378,15691,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	73893007	73919865	chr2:73893007-73919865	1	+	73901311	73919575	789624	10	44,563,162,129,111,85,162,192,182,434,	0,3744,8268,9352,15665,16047,20477,21672,23576,26424,
#Partially deleted in new
chr2	73893007	73901805	chr2:73893007-73901805	0	+	73893007	73893007	8553170	2	44,530,	0,8268,
#Partially deleted in new
chr2	73926825	73958961	chr2:73926825-73958961	3	+	73926910	73958736	0	7	227,113,188,148,116,100,252,	0,12084,19893,23759,30299,31320,31884,
#Partially deleted in new
chr2	73926825	73958961	chr2:73926825-73958961	1	+	73926910	73958736	0	5	227,113,188,100,252,	0,12084,19893,31320,31884,
#Partially deleted in new
chr2	73926825	73958959	chr2:73926825-73958959	1	+	73926910	73946846	0	6	227,188,148,116,100,250,	0,19893,23759,30299,31320,31884,
#Partially deleted in new
chr2	73926874	73958946	chr2:73926874-73958946	0	+	73926910	73946846	0	4	178,188,100,237,	0,19844,31271,31835,
#Partially deleted in new
chr2	73926892	73947131	chr2:73926892-73947131	0	+	73926892	73926892	8553170	2	160,413,	0,19826,
#Partially deleted in new
chr2	73926893	73958245	chr2:73926893-73958245	0	+	73926893	73926893	8553170	5	159,113,188,132,100,	0,12016,19825,23707,31252,
#Partially deleted in new
chr2	73926896	73958788	chr2:73926896-73958788	0	+	73926896	73926896	789624	6	156,86,188,106,100,79,	0,5701,19822,23730,31249,31813,
#Partially deleted in new
chr2	73926907	73947053	chr2:73926907-73947053	0	+	73926907	73926907	8553170	3	145,113,335,	0,12002,19811,
#Partially deleted in new
chr2	73947641	73981441	chr2:73947641-73981441	3	-	73947641	73947641	8553170	2	294,307,	0,33493,
#Partially deleted in new
chr2	73957969	73981433	chr2:73957969-73981433	1	-	73957969	73957969	789624	2	238,325,	0,23139,
#Partially deleted in new
chr2	73958015	73981361	chr2:73958015-73981361	0	-	73958015	73958015	8553170	2	192,227,	0,23119,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	73968122	73968206	chr2:73968122-73968206	7	-	73968122	73968122	16724991	1	84,	0,
#Deleted in new
chr2	73985131	73986343	chr2:73985131-73986343	3	+	73985131	73985131	8553170	2	26,364,	0,848,
#Partially deleted in new
chr2	73986403	74108176	chr2:73986403-74108176	3	+	73986403	74102176	789624	11	303,57,2134,91,94,209,151,90,138,337,7784,	0,16706,59874,87145,94094,101426,103493,106498,107125,112872,113989,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	73986525	73993740	chr2:73986525-73993740	0	+	73986525	73986525	8553170	2	181,529,	0,6686,
#Deleted in new
chr2	73998336	73998548	chr2:73998336-73998548	3	-	73998336	73998336	8553170	1	212,	0,
#Partially deleted in new
chr2	74002712	74102176	chr2:74002712-74102176	1	+	74002777	74102176	789624	11	89,57,2134,91,94,209,151,90,138,337,1784,	0,397,43565,70836,77785,85117,87184,90189,90816,96563,97680,
#Partially deleted in new
chr2	74047159	74073904	chr2:74047159-74073904	0	+	74047159	74047159	8553170	2	1252,356,	0,26389,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	74120679	74123218	chr2:74120679-74123218	7	+	74120679	74120679	16724991	2	1771,223,	0,2316,
#Partially deleted in new
chr2	74130582	74135394	chr2:74130582-74135394	3	+	74130582	74130582	8553170	2	340,154,	0,4658,
#Deleted in new
chr2	74134471	74135395	chr2:74134471-74135395	1	+	74134471	74134471	8553170	1	924,	0,
#Partially deleted in new
chr2	74135397	74147994	chr2:74135397-74147994	3	-	74135592	74147874	0	4	261,89,115,174,	0,6874,9791,12423,
#Partially deleted in new
chr2	74135400	74145508	chr2:74135400-74145508	0	-	74135400	74135400	8553170	3	258,89,320,	0,6871,9788,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	74135400	74147912	chr2:74135400-74147912	0	-	74135400	74135400	8553170	2	258,2724,	0,9788,
#Partially deleted in new
chr2	74135414	74147905	chr2:74135414-74147905	1	-	74135521	74147874	0	3	244,115,85,	0,9774,12406,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	74135414	74147912	chr2:74135414-74147912	0	-	74135414	74135414	8553170	4	244,115,985,92,	0,9774,10827,12406,
#Deleted in new
chr2	74148008	74149054	chr2:74148008-74149054	0	+	74148008	74148008	789624	2	470,161,	0,885,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	74148038	74150061	chr2:74148038-74150061	0	+	74148038	74148038	8553170	2	440,1364,	0,659,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	74148044	74149988	chr2:74148044-74149988	3	+	74148044	74148044	789624	3	179,129,1291,	0,305,653,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	74152527	74178868	chr2:74152527-74178868	3	-	74156567	74178674	0	6	4118,164,134,94,167,208,	0,6563,12690,14486,20058,26133,
#Partially deleted in new
chr2	74159068	74178866	chr2:74159068-74178866	0	-	74159068	74159068	8553170	5	186,134,94,164,206,	0,6149,7945,13517,19592,
#Partially deleted in new
chr2	74159108	74178314	chr2:74159108-74178314	0	-	74159108	74159108	8553170	5	146,134,94,167,200,	0,6109,7905,13477,19006,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	74164021	74178868	chr2:74164021-74178868	0	-	74164021	74164021	8553170	4	1330,94,167,208,	0,2992,8564,14639,
#Partially deleted in new
chr2	74172675	74178898	chr2:74172675-74178898	0	-	74172675	74172675	8553170	3	77,167,238,	0,5439,5985,
#Deleted in new
chr2	74178007	74178879	chr2:74178007-74178879	0	-	74178007	74178007	8553170	2	274,219,	0,653,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	74191387	74192245	chr2:74191387-74192245	3	+	74191387	74191387	8553170	1	858,	0,
#Partially deleted in new
chr2	74191389	74191500	chr2:74191389-74191500	0	+	74191389	74191389	8553170	1	111,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	74196697	74198560	chr2:74196697-74198560	3	-	74196697	74196697	8553170	1	1863,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	74198561	74217565	chr2:74198561-74217565	3	+	74198641	74214242	0	8	181,185,123,153,108,93,126,3487,	0,7143,9142,10007,11380,12637,13179,15517,
#Partially deleted in new
chr2	74198609	74215298	chr2:74198609-74215298	1	+	74198641	74214242	789624	5	133,185,93,126,1220,	0,7095,12589,13131,15469,
#Partially deleted in new
chr2	74198612	74214741	chr2:74198612-74214741	0	+	74198641	74207716	789624	7	130,123,153,108,93,126,663,	0,9091,9956,11329,12586,13128,15466,
#Partially deleted in new
chr2	74198614	74208721	chr2:74198614-74208721	0	+	74198614	74198614	8553170	5	128,185,107,123,153,	0,7090,7367,9089,9954,
#Partially deleted in new
chr2	74198614	74214605	chr2:74198614-74214605	0	+	74198641	74208578	789624	6	128,153,108,93,126,527,	0,9954,11327,12584,13126,15464,
#Partially deleted in new
chr2	74198615	74215277	chr2:74198615-74215277	1	+	74198641	74214242	789624	6	127,185,153,108,93,1199,	0,7089,9953,11326,12583,15463,
#Partially deleted in new
chr2	74198628	74206073	chr2:74198628-74206073	0	+	74198628	74198628	8553170	2	114,369,	0,7076,
#Partially deleted in new
chr2	74206393	74210051	chr2:74206393-74210051	0	+	74206393	74206393	8553170	4	213,123,153,110,	0,1310,2175,3548,
#Partially deleted in new
chr2	74211603	74363377	chr2:74211603-74363377	3	-	74361498	74363377	789624	39	224,74,134,68,85,172,174,48,69,73,179,162,114,201,59,272,134,175,210,155,88,158,56,96,153,161,130,192,81,67,151,49,80,153,224,90,80,184,84,	0,2798,4479,9830,11264,13236,15353,15913,16206,19632,20865,21798,23497,27731,30390,35432,36749,38739,40575,41370,43015,44171,47984,50533,52543,53500,74169,92885,103341,116516,122423,127251,130854,149400,149809,150448,151046,151390,151690,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr2	74216241	74343407	chr2:74216241-74343407	1	-	74221466	74315023	789624	31	2551,68,85,156,174,69,73,179,162,114,201,59,272,134,175,210,155,88,158,56,96,153,161,130,192,81,67,151,49,77,52,	0,5192,6626,8598,10715,11568,14994,16227,17160,18859,23093,25752,30794,32111,34101,35937,36732,38377,39533,43346,45895,47905,48862,69531,88247,98703,111878,117785,122613,126216,127114,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr2	74216241	74339712	chr2:74216241-74339712	0	-	74216241	74216241	8553170	26	2551,68,85,156,174,69,73,162,114,201,59,272,134,175,210,155,88,158,56,96,153,161,130,67,151,858,	0,5192,6626,8598,10715,11568,14994,17160,18859,23093,25752,30794,32111,34101,35937,36732,38377,39533,43346,45895,47905,48862,69531,111878,117785,122613,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr2	74216242	74334193	chr2:74216242-74334193	1	-	74221466	74315023	789624	29	2550,68,85,156,174,48,69,73,179,162,114,201,59,272,134,175,210,155,88,158,56,96,153,161,130,192,81,67,167,	0,5191,6625,8597,10714,11274,11567,14993,16226,17159,18858,23092,25751,30793,32110,34100,35936,36731,38376,39532,43345,45894,47904,48861,69530,88246,98702,111877,117784,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr2	74216242	74334193	chr2:74216242-74334193	1	-	74221466	74315023	789624	28	2550,68,85,156,174,69,73,179,162,114,201,59,272,134,175,210,155,88,158,56,96,153,161,130,192,81,67,167,	0,5191,6625,8597,10714,11567,14993,16226,17159,18858,23092,25751,30793,32110,34100,35936,36731,38376,39532,43345,45894,47904,48861,69530,88246,98702,111877,117784,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	74217658	74227050	chr2:74217658-74227050	0	-	74221466	74227050	789624	4	467,68,85,94,	0,3775,5209,9298,
#Partially deleted in new
chr2	74218610	74227878	chr2:74218610-74227878	0	-	74218626	74227878	789624	5	182,68,156,174,69,	0,2823,6229,8346,9199,
#Partially deleted in new
chr2	74221433	74328166	chr2:74221433-74328166	1	-	74221466	74315023	789624	24	68,85,156,174,69,73,179,162,201,59,272,134,175,210,155,88,158,56,96,153,161,130,81,47,	0,1434,3406,5523,6376,9802,11035,11968,17901,20560,25602,26919,28909,30745,31540,33185,34341,38154,40703,42713,43670,64339,93511,106686,
#Partially deleted in new
chr2	74221433	74334139	chr2:74221433-74334139	0	-	74222924	74315023	789624	25	68,85,172,174,69,73,162,201,59,272,134,175,210,155,88,158,56,96,153,161,130,192,81,67,113,	0,1434,3406,5523,6376,9802,11968,17901,20560,25602,26919,28909,30745,31540,33185,34341,38154,40703,42713,43670,64339,83055,93511,106686,112593,
#Partially deleted in new
chr2	74221466	74315023	chr2:74221466-74315023	1	-	74221466	74315023	789624	23	35,85,156,73,179,162,114,201,59,272,134,175,210,155,88,158,56,96,153,161,130,192,79,	0,1401,3373,9769,11002,11935,13634,17868,20527,25569,26886,28876,30712,31507,33152,34308,38121,40670,42680,43637,64306,83022,93478,
#Partially deleted in new
chr2	74221466	74343409	chr2:74221466-74343409	3	-	74221466	74315023	789624	31	35,85,156,174,48,69,73,179,162,114,201,59,272,134,175,210,155,88,158,56,96,153,161,130,192,81,67,151,49,77,54,	0,1401,3373,5490,6050,6343,9769,11002,11935,13634,17868,20527,25569,26886,28876,30712,31507,33152,34308,38121,40670,42680,43637,64306,83022,93478,106653,112560,117388,120991,121889,
#Partially deleted in new
chr2	74248354	74250787	chr2:74248354-74250787	0	-	74248354	74248354	8553170	2	132,445,	0,1988,
#Partially deleted in new
chr2	74264147	74290705	chr2:74264147-74290705	0	-	74264147	74285825	789624	4	152,161,130,462,	0,956,21625,26096,
#Partially deleted in new
chr2	74265231	74328235	chr2:74265231-74328235	0	-	74265231	74315023	789624	5	33,130,192,81,116,	0,20541,39257,49713,62888,
#Partially deleted in new
chr2	74285784	74343414	chr2:74285784-74343414	0	-	74285784	74315023	789624	7	118,192,81,151,49,77,59,	0,18704,29160,48242,53070,56673,57571,
#Deleted in new
chr2	74306727	74308008	chr2:74306727-74308008	7	-	74306727	74306727	16724991	1	1281,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	74319398	74319501	chr2:74319398-74319501	3	+	74319398	74319398	8553170	1	103,	0,
#Partially deleted in new
chr2	74350068	74351009	chr2:74350068-74351009	7	+	74350068	74350068	16724991	2	437,290,	0,651,
#Deleted in new
chr2	74351133	74351419	chr2:74351133-74351419	7	+	74351133	74351133	16724991	1	286,	0,
#Partially deleted in new
chr2	74361153	74380355	chr2:74361153-74380355	1	-	74361498	74380037	0	32	483,90,80,184,134,15,167,143,126,132,162,150,63,69,169,161,153,117,192,105,160,79,205,198,192,21,18,21,35,79,246,351,	0,898,1496,1840,2140,2460,3921,4361,4739,5090,5305,5629,5891,6198,6542,6817,7574,7944,8146,8811,9032,9312,9467,9825,10383,11774,13169,15588,16278,16494,16846,18851,
#Partially deleted in new
chr2	74361153	74380355	chr2:74361153-74380355	3	-	74361498	74380037	0	31	483,90,80,184,134,15,167,143,126,132,162,150,63,69,169,161,153,117,192,105,160,79,205,198,192,21,18,35,79,246,351,	0,898,1496,1840,2140,2460,3921,4361,4739,5090,5305,5629,5891,6198,6542,6817,7574,7944,8146,8811,9032,9312,9467,9825,10383,11774,13169,16278,16494,16846,18851,
#Partially deleted in new
chr2	74361153	74380355	chr2:74361153-74380355	1	-	74361498	74378227	789624	31	483,90,80,184,134,167,143,126,132,162,150,63,69,169,161,153,117,192,105,160,79,205,198,192,21,18,21,35,79,246,351,	0,898,1496,1840,2140,3921,4361,4739,5090,5305,5629,5891,6198,6542,6817,7574,7944,8146,8811,9032,9312,9467,9825,10383,11774,13169,15588,16278,16494,16846,18851,
#Deleted in new
chr2	74361154	74364901	chr2:74361154-74364901	0	-	74361154	74361154	8553170	5	482,90,80,184,1608,	0,897,1495,1839,2139,
#Deleted in new
chr2	74361154	74369395	chr2:74361154-74369395	0	-	74361154	74361154	8553170	2	383,96,	0,8145,
#Partially deleted in new
chr2	74361155	74391867	chr2:74361155-74391867	0	-	74366302	74378227	789624	27	481,90,80,184,134,167,143,126,377,150,63,69,169,161,153,117,192,105,160,79,205,198,192,35,79,246,74,	0,896,1494,1838,2138,3919,4359,4737,5088,5627,5889,6196,6540,6815,7572,7942,8144,8809,9030,9310,9465,9823,10381,16276,16492,16844,30638,
#Partially deleted in new
chr2	74361156	74392087	chr2:74361156-74392087	1	-	74361498	74378227	0	28	480,90,80,184,134,167,143,126,132,162,150,63,69,169,161,153,117,192,105,160,79,205,198,192,35,79,246,294,	0,895,1493,1837,2137,3918,4358,4736,5087,5302,5626,5888,6195,6539,6814,7571,7941,8143,8808,9029,9309,9464,9822,10380,16275,16491,16843,30637,
#Partially deleted in new
chr2	74361156	74374735	chr2:74361156-74374735	1	-	74361498	74374352	0	26	480,90,80,184,134,167,143,126,132,162,150,63,69,169,161,153,117,192,105,160,79,205,198,192,21,413,	0,895,1493,1837,2137,3918,4358,4736,5087,5302,5626,5888,6195,6539,6814,7571,7941,8143,8808,9029,9309,9464,9822,10380,11771,13166,
#Partially deleted in new
chr2	74361156	74374735	chr2:74361156-74374735	1	-	74361498	74374352	0	27	480,90,80,184,134,15,167,143,126,132,162,150,63,69,169,161,153,117,192,105,160,79,205,198,192,21,413,	0,895,1493,1837,2137,2457,3918,4358,4736,5087,5302,5626,5888,6195,6539,6814,7571,7941,8143,8808,9029,9309,9464,9822,10380,11771,13166,
#Partially deleted in new
chr2	74361157	74391865	chr2:74361157-74391865	1	-	74361498	74378227	789624	31	479,90,80,184,134,167,143,126,132,162,150,63,69,169,161,153,117,192,105,160,79,205,198,192,21,18,21,35,79,246,72,	0,894,1492,1836,2136,3917,4357,4735,5086,5301,5625,5887,6194,6538,6813,7570,7940,8142,8807,9028,9308,9463,9821,10379,11770,13165,15584,16274,16490,16842,30636,
#Partially deleted in new
chr2	74361158	74372042	chr2:74361158-74372042	0	-	74361158	74361158	8553170	20	478,90,80,184,134,583,126,132,474,63,69,169,910,117,192,105,160,79,205,1064,	0,893,1491,1835,2135,3916,4734,5085,5300,5886,6193,6537,6812,7939,8141,8806,9027,9307,9462,9820,
#Partially deleted in new
chr2	74361498	74380299	chr2:74361498-74380299	1	-	74361498	74380037	0	28	138,90,80,184,134,167,143,126,132,162,150,63,69,169,161,153,117,192,105,160,79,205,198,192,35,79,246,295,	0,553,1151,1495,1795,3576,4016,4394,4745,4960,5284,5546,5853,6197,6472,7229,7599,7801,8466,8687,8967,9122,9480,10038,15933,16149,16501,18506,
#Deleted in new
chr2	74362050	74362929	chr2:74362050-74362929	0	-	74362050	74362050	8553170	2	91,280,	0,599,
#Deleted in new
chr2	74365456	74366194	chr2:74365456-74366194	0	-	74365456	74365456	8553170	2	201,302,	0,436,
#Deleted in new
chr2	74365971	74368013	chr2:74365971-74368013	0	-	74365971	74365971	8553170	7	47,132,150,63,69,169,43,	0,272,811,1073,1380,1724,1999,
#Deleted in new
chr2	74370978	74371895	chr2:74370978-74371895	0	-	74370978	74370978	8553170	2	198,359,	0,558,
#Deleted in new
chr2	74371005	74373382	chr2:74371005-74373382	0	-	74371005	74371005	8553170	4	171,192,21,185,	0,531,1922,2192,
#Deleted in new
chr2	74371356	74374695	chr2:74371356-74374695	0	-	74371356	74371356	8553170	3	372,21,373,	0,1571,2966,
#Deleted in new
chr2	74371642	74380557	chr2:74371642-74380557	0	-	74371642	74380552	789624	8	86,21,18,21,35,79,246,59,	0,1285,2680,5099,5789,6005,6357,8856,
#Deleted in new
chr2	74371674	74373215	chr2:74371674-74373215	0	-	74371674	74371674	8553170	2	54,288,	0,1253,
#Deleted in new
chr2	74376740	74380345	chr2:74376740-74380345	0	-	74376740	74378227	789624	5	22,35,79,246,245,	0,691,907,1259,3360,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	74377431	74391843	chr2:74377431-74391843	0	-	74377431	74390627	789624	5	35,79,246,146,50,	0,216,568,13151,14362,
#Partially deleted in new
chr2	74377692	74391800	chr2:74377692-74391800	0	-	74377692	74378227	789624	3	34,246,318,	0,307,13790,
#Deleted in new
chr2	74377999	74380283	chr2:74377999-74380283	0	-	74377999	74378227	789624	3	246,68,279,	0,905,2005,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	74377999	74391780	chr2:74377999-74391780	0	-	74377999	74378227	789624	5	246,64,146,41,45,	0,5743,12583,13188,13736,
#Partially deleted in new
chr2	74378035	74392036	chr2:74378035-74392036	0	-	74378035	74378227	789624	3	210,68,243,	0,869,13758,
#Partially deleted in new
chr2	74378186	74385441	chr2:74378186-74385441	0	-	74378186	74378227	789624	2	59,502,	0,6753,
#Deleted in new
chr2	74385485	74387026	chr2:74385485-74387026	1	+	74385485	74385485	8553170	3	265,111,208,	0,1100,1333,
#Partially deleted in new
chr2	74385495	74391427	chr2:74385495-74391427	0	+	74385495	74385495	8553170	2	255,269,	0,5663,
#Partially deleted in new
chr2	74385496	74391904	chr2:74385496-74391904	0	+	74385496	74385496	8553170	3	254,85,427,	0,5662,5981,
#Partially deleted in new
chr2	74385502	74392233	chr2:74385502-74392233	0	+	74385502	74385502	8553170	3	248,85,245,	0,5656,6486,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	74385523	74392896	chr2:74385523-74392896	0	+	74385523	74385523	8553170	3	227,138,908,	0,5954,6465,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	74385717	74393882	chr2:74385717-74393882	3	+	74385717	74385717	789624	4	33,85,138,1889,	0,5441,5760,6276,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	74393835	74421662	chr2:74393835-74421662	3	-	74408207	74415891	789624	5	4866,107,89,1851,120,	0,14271,18812,20555,27707,
#Partially deleted in new
chr2	74407796	74413603	chr2:74407796-74413603	7	-	74407796	74407796	16724991	6	189,107,183,89,240,174,	0,310,910,4851,5231,5633,
#Partially deleted in new
chr2	74414175	74421560	chr2:74414175-74421560	1	-	74414328	74421560	789624	4	1443,219,222,18,	0,1533,1835,7367,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	74414176	74416583	chr2:74414176-74416583	1	-	74414328	74415891	789624	1	2407,	0,
#Partially deleted in new
chr2	74414177	74417717	chr2:74414177-74417717	3	-	74414328	74417408	789624	4	1441,219,231,336,	0,1531,1833,3204,
#Partially deleted in new
chr2	74415407	74421591	chr2:74415407-74421591	0	-	74415407	74415891	789624	2	834,49,	0,6135,
#Partially deleted in new
chr2	74415596	74417717	chr2:74415596-74417717	0	-	74415596	74417408	789624	3	331,231,336,	0,414,1785,
#Partially deleted in new
chr2	74416016	74418542	chr2:74416016-74418542	0	-	74416016	74418442	789624	2	225,202,	0,2324,
#Deleted in new
chr2	74418121	74418442	chr2:74418121-74418442	7	-	74418121	74418121	16724991	1	321,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	74421677	74425474	chr2:74421677-74425474	0	+	74421677	74421677	8553170	8	139,63,195,54,128,101,163,58,	0,1192,1513,1800,2177,3197,3397,3739,
#Partially deleted in new
chr2	74421728	74425754	chr2:74421728-74425754	1	+	74421750	74425657	789624	9	88,63,67,54,128,101,163,75,115,	0,1141,1590,1749,2126,3146,3346,3688,3911,
#Partially deleted in new
chr2	74421729	74425755	chr2:74421729-74425755	3	+	74422153	74425701	789624	10	87,223,63,67,54,128,101,163,75,186,	0,423,1140,1589,1748,2125,3145,3345,3687,3840,
#Partially deleted in new
chr2	74421729	74423990	chr2:74421729-74423990	0	+	74422153	74423990	789624	5	87,223,63,67,136,	0,423,1140,1589,2125,
#Partially deleted in new
chr2	74421729	74423111	chr2:74421729-74423111	0	+	74421729	74421729	8553170	3	87,223,242,	0,423,1140,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	74421729	74422610	chr2:74421729-74422610	0	+	74421729	74421729	8553170	2	87,458,	0,423,
#Partially deleted in new
chr2	74421729	74423508	chr2:74421729-74423508	0	+	74421729	74421729	8553170	4	87,223,63,190,	0,423,1140,1589,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	74421743	74425755	chr2:74421743-74425755	0	+	74421743	74421743	8553170	7	1189,67,54,128,163,75,186,	0,1575,1734,2111,3331,3673,3826,
#Partially deleted in new
chr2	74421758	74425650	chr2:74421758-74425650	0	+	74421758	74421758	8553170	10	58,256,63,67,54,128,101,163,75,81,	0,361,1111,1560,1719,2096,3116,3316,3658,3811,
#Partially deleted in new
chr2	74421763	74424976	chr2:74421763-74424976	0	+	74421763	74421763	8553170	6	612,63,67,54,128,102,	0,1106,1555,1714,2091,3111,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	74421765	74425755	chr2:74421765-74425755	0	+	74421765	74421765	8553170	6	1167,664,101,163,75,186,	0,1553,3109,3309,3651,3804,
#Partially deleted in new
chr2	74422174	74425704	chr2:74422174-74425704	0	+	74422174	74422174	8553170	8	201,63,67,54,128,141,75,135,	0,695,1144,1303,1680,2922,3242,3395,
#Deleted in new
chr2	74424872	74425755	chr2:74424872-74425755	0	+	74424872	74424872	8553170	3	365,75,186,	0,544,697,
#Partially deleted in new
chr2	74425835	74440583	chr2:74425835-74440583	3	-	74426242	74439622	789624	13	739,105,169,129,107,95,210,118,54,62,200,427,231,	0,1333,1588,2432,2795,3012,3992,4416,4629,4780,6631,13715,14517,
#Partially deleted in new
chr2	74425875	74441899	chr2:74425875-74441899	1	-	74426242	74441816	789624	12	699,105,169,129,107,95,210,118,54,62,200,194,	0,1293,1548,2392,2755,2972,3952,4376,4589,4740,6591,15830,
#Partially deleted in new
chr2	74425882	74440631	chr2:74425882-74440631	1	-	74426242	74432627	789624	12	692,105,169,129,107,95,210,118,54,62,200,279,	0,1286,1541,2385,2748,2965,3945,4369,4582,4733,6584,14470,
#Deleted in new
chr2	74426179	74427200	chr2:74426179-74427200	0	-	74426646	74427200	789624	2	580,32,	0,989,
#Deleted in new
chr2	74426405	74428002	chr2:74426405-74428002	0	-	74426405	74426405	8553170	3	169,105,579,	0,763,1018,
#Deleted in new
chr2	74430027	74430929	chr2:74430027-74430929	0	-	74430027	74430027	8553170	4	10,118,54,314,	0,224,437,588,
#Partially deleted in new
chr2	74430254	74442422	chr2:74430254-74442422	0	-	74430254	74430254	8553170	5	115,54,62,110,223,	0,210,361,2212,11945,
#Partially deleted in new
chr2	74431754	74441898	chr2:74431754-74441898	0	-	74431754	74431754	8553170	2	912,193,	0,9951,
#Partially deleted in new
chr2	74432058	74440583	chr2:74432058-74440583	0	-	74432058	74432058	8553170	3	608,427,231,	0,7492,8294,
#Partially deleted in new
chr2	74432471	74440197	chr2:74432471-74440197	0	-	74432471	74432471	8553170	2	195,647,	0,7079,
#Partially deleted in new
chr2	74432560	74442419	chr2:74432560-74442419	0	-	74432560	74432560	8553170	2	106,714,	0,9145,
#Deleted in new
chr2	74455022	74457960	chr2:74455022-74457960	3	+	74455116	74457864	0	5	152,193,119,170,627,	0,383,795,1080,2311,
#Deleted in new
chr2	74455086	74457367	chr2:74455086-74457367	0	+	74455116	74457367	789624	5	88,193,119,125,34,	0,319,731,1061,2247,
#Partially deleted in new
chr2	74455087	74460884	chr2:74455087-74460884	3	+	74455116	74459667	789624	8	87,193,119,170,527,103,177,664,	0,318,730,1015,2246,4555,4785,5133,
#Partially deleted in new
chr2	74455099	74460846	chr2:74455099-74460846	0	+	74455116	74459689	789624	8	75,193,119,170,205,103,177,626,	0,306,718,1003,2234,4543,4773,5121,
#Deleted in new
chr2	74455099	74457375	chr2:74455099-74457375	0	+	74455099	74455099	8553170	5	75,193,135,170,42,	0,306,702,1003,2234,
#Deleted in new
chr2	74455101	74457662	chr2:74455101-74457662	1	+	74455116	74457436	789624	5	73,193,119,170,241,	0,304,716,1001,2320,
#Deleted in new
chr2	74455107	74457371	chr2:74455107-74457371	0	+	74455107	74455107	8553170	4	491,119,170,38,	0,710,995,2226,
#Deleted in new
chr2	74455108	74457427	chr2:74455108-74457427	0	+	74455108	74455108	8553170	5	188,208,119,170,94,	0,282,709,994,2225,
#Deleted in new
chr2	74455115	74457400	chr2:74455115-74457400	0	+	74455116	74457400	789624	5	59,208,119,170,67,	0,275,702,987,2218,
#Deleted in new
chr2	74455116	74457675	chr2:74455116-74457675	0	+	74455116	74455116	8553170	4	58,119,170,342,	0,701,986,2217,
#Deleted in new
chr2	74455491	74457540	chr2:74455491-74457540	0	+	74455491	74456156	789624	4	107,133,170,207,	0,326,611,1842,
#Partially deleted in new
chr2	74458328	74460891	chr2:74458328-74460891	3	+	74458602	74460681	0	4	343,103,177,671,	0,1314,1544,1892,
#Partially deleted in new
chr2	74458399	74460891	chr2:74458399-74460891	1	+	74458602	74460681	789624	5	272,102,103,177,671,	0,597,1243,1473,1821,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	74458438	74459905	chr2:74458438-74459905	0	+	74458438	74458438	8553170	5	233,88,125,103,33,	0,393,999,1204,1434,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	74458439	74460310	chr2:74458439-74460310	0	+	74458439	74458439	8553170	5	131,33,308,177,90,	0,199,998,1433,1781,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	74458449	74460230	chr2:74458449-74460230	0	+	74458449	74458449	8553170	5	222,85,103,177,10,	0,1028,1193,1423,1771,
#Partially deleted in new
chr2	74458449	74460617	chr2:74458449-74460617	0	+	74458449	74458449	8553170	4	88,103,177,397,	0,1193,1423,1771,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	74458458	74460883	chr2:74458458-74460883	0	+	74458458	74458458	8553170	4	1104,103,177,663,	0,1184,1414,1762,
#Partially deleted in new
chr2	74458468	74460856	chr2:74458468-74460856	1	+	74458602	74460681	789624	4	203,94,177,636,	0,1183,1404,1752,
#Partially deleted in new
chr2	74458471	74460443	chr2:74458471-74460443	0	+	74458871	74460443	789624	5	200,286,103,177,223,	0,360,1171,1401,1749,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	74458473	74460696	chr2:74458473-74460696	0	+	74458473	74458473	8553170	5	198,115,103,177,476,	0,964,1169,1399,1747,
#Partially deleted in new
chr2	74458487	74460432	chr2:74458487-74460432	0	+	74458487	74458487	8553170	3	184,103,560,	0,1155,1385,
#Partially deleted in new
chr2	74458511	74459980	chr2:74458511-74459980	0	+	74458511	74458511	8553170	3	606,103,108,	0,1131,1361,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	74458879	74459747	chr2:74458879-74459747	0	+	74458879	74458879	8553170	3	219,85,105,	0,598,763,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	74459211	74460428	chr2:74459211-74460428	0	+	74459211	74459211	8553170	3	534,177,208,	0,661,1009,
#Partially deleted in new
chr2	74461056	74465410	chr2:74461056-74465410	3	-	74461274	74465247	789624	4	1956,197,227,515,	0,2133,3439,3839,
#Partially deleted in new
chr2	74461056	74465382	chr2:74461056-74465382	1	-	74461274	74465247	789624	4	1956,197,227,487,	0,2133,3439,3839,
#Partially deleted in new
chr2	74461068	74465385	chr2:74461068-74465385	1	-	74462968	74465247	789624	4	1944,7,227,490,	0,2311,3427,3827,
#Deleted in new
chr2	74461069	74463646	chr2:74461069-74463646	0	-	74461069	74461069	8553170	2	1943,457,	0,2120,
#Partially deleted in new
chr2	74461101	74465410	chr2:74461101-74465410	1	-	74461274	74462963	8553170	3	1911,197,97,	0,2088,4212,
#Partially deleted in new
chr2	74461101	74465362	chr2:74461101-74465362	1	-	74462968	74464929	8553170	6	1911,30,7,227,92,49,	0,2088,2278,3394,3794,4212,
#Partially deleted in new
chr2	74461105	74465400	chr2:74461105-74465400	1	-	74462716	74465247	8553170	5	1668,52,197,227,505,	0,1855,2084,3390,3790,
#Partially deleted in new
chr2	74461117	74465162	chr2:74461117-74465162	0	-	74461274	74465162	8553170	3	1895,142,267,	0,2072,3778,
#Partially deleted in new
chr2	74461119	74465400	chr2:74461119-74465400	0	-	74463258	74464929	8553170	4	1893,197,92,87,	0,2070,3776,4194,
#Partially deleted in new
chr2	74461119	74465404	chr2:74461119-74465404	1	-	74461274	74462963	8553170	3	1893,142,91,	0,2070,4194,
#Partially deleted in new
chr2	74461125	74465245	chr2:74461125-74465245	0	-	74463283	74465245	8553170	4	1887,142,227,350,	0,2064,3370,3770,
#Partially deleted in new
chr2	74461125	74465337	chr2:74461125-74465337	0	-	74464925	74465247	8553170	5	1887,7,227,92,256,	0,2254,3370,3770,3956,
#Partially deleted in new
chr2	74461178	74465396	chr2:74461178-74465396	1	-	74461274	74464929	789624	5	1834,197,227,92,83,	0,2011,3317,3717,4135,
#Partially deleted in new
chr2	74461183	74465327	chr2:74461183-74465327	0	-	74461183	74461183	8553170	3	2203,227,432,	0,3312,3712,
#Partially deleted in new
chr2	74461222	74465283	chr2:74461222-74465283	0	-	74461222	74461222	8553170	3	1790,197,788,	0,1967,3273,
#Partially deleted in new
chr2	74461257	74465388	chr2:74461257-74465388	0	-	74463258	74465247	789624	3	1755,197,493,	0,1932,3638,
#Partially deleted in new
chr2	74462278	74465294	chr2:74462278-74465294	0	-	74462278	74465247	8553170	4	734,142,57,399,	0,911,2387,2617,
#Deleted in new
chr2	74462793	74463637	chr2:74462793-74463637	0	-	74462793	74462793	8553170	2	41,448,	0,396,
#Partially deleted in new
chr2	74462996	74465393	chr2:74462996-74465393	0	-	74462996	74464717	789624	4	16,197,227,80,	0,193,1499,2317,
#Deleted in new
chr2	74464416	74465400	chr2:74464416-74465400	0	-	74464416	74464416	8553170	2	306,505,	0,479,
#Deleted in new
chr2	74471957	74473322	chr2:74471957-74473322	3	-	74472118	74472660	0	3	295,113,754,	0,400,611,
#Deleted in new
chr2	74471985	74472687	chr2:74471985-74472687	1	-	74472131	74472660	789624	2	267,119,	0,583,
#Partially deleted in new
chr2	74471985	74482542	chr2:74471985-74482542	0	-	74472794	74482542	789624	11	267,113,228,200,178,115,114,131,150,87,726,	0,372,583,2930,3239,3626,8783,8970,9237,9466,9831,
#Deleted in new
chr2	74471991	74472547	chr2:74471991-74472547	0	-	74471991	74471991	8553170	2	261,190,	0,366,
#Deleted in new
chr2	74471992	74472664	chr2:74471992-74472664	0	-	74471992	74471992	8553170	2	478,96,	0,576,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	74473789	74483234	chr2:74473789-74483234	1	-	74474545	74482837	789624	9	1013,200,178,115,114,131,150,87,1418,	0,1126,1435,1822,6979,7166,7433,7662,8027,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	74474101	74482996	chr2:74474101-74482996	3	-	74474545	74482837	789624	9	701,200,178,115,114,110,150,87,1180,	0,814,1123,1510,6667,6854,7121,7350,7715,
#Deleted in new
chr2	74474558	74475686	chr2:74474558-74475686	0	-	74474558	74474558	8553170	3	557,178,75,	0,666,1053,
#Deleted in new
chr2	74474912	74475687	chr2:74474912-74475687	0	-	74474912	74474912	8553170	2	490,76,	0,699,
#Partially deleted in new
chr2	74475335	74481257	chr2:74475335-74481257	0	-	74475335	74475335	8553170	4	391,114,131,35,	0,5433,5620,5887,
#Deleted in new
chr2	74480768	74483247	chr2:74480768-74483247	0	-	74480768	74480768	8553170	6	114,131,150,87,373,180,	0,187,454,683,1048,2299,
#Deleted in new
chr2	74480769	74483408	chr2:74480769-74483408	0	-	74480769	74480769	8553170	4	113,131,150,341,	0,186,453,2298,
#Deleted in new
chr2	74481255	74481979	chr2:74481255-74481979	0	-	74481255	74481255	8553170	2	117,528,	0,196,
#Partially deleted in new
chr2	74483072	74494559	chr2:74483072-74494559	0	+	74483072	74483072	8553170	7	63,89,103,941,81,192,2556,	0,249,6952,7171,8222,8408,8931,
#Partially deleted in new
chr2	74483081	74494559	chr2:74483081-74494559	0	+	74483095	74490465	789624	12	54,89,230,84,57,81,186,52,91,142,102,1638,	0,240,7162,7574,8046,8213,8399,8922,9057,9222,9564,9840,
#Partially deleted in new
chr2	74483086	74494559	chr2:74483086-74494559	1	+	74483095	74492233	789624	10	49,89,103,230,84,57,81,192,52,2421,	0,235,6938,7157,7569,8041,8208,8394,8917,9052,
#Partially deleted in new
chr2	74483086	74493083	chr2:74483086-74493083	1	+	74483095	74492992	789624	9	49,89,103,230,84,57,81,148,117,	0,235,6938,7157,7569,8041,8208,8394,9880,
#Partially deleted in new
chr2	74483086	74493083	chr2:74483086-74493083	0	+	74483095	74490465	789624	8	49,89,230,529,81,186,52,945,	0,235,7157,7569,8208,8394,8917,9052,
#Partially deleted in new
chr2	74483086	74493083	chr2:74483086-74493083	0	+	74483086	74483086	8553170	12	49,89,103,230,84,57,81,186,112,307,102,162,	0,235,6938,7157,7569,8041,8208,8394,8857,9052,9559,9835,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	74483088	74494886	chr2:74483088-74494886	3	+	74483095	74493218	789624	13	47,89,103,230,84,57,81,192,52,91,142,102,1965,	0,233,6936,7155,7567,8039,8206,8392,8915,9050,9215,9557,9833,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	74483088	74483705	chr2:74483088-74483705	0	+	74483088	74483088	8553170	2	47,384,	0,233,
#Partially deleted in new
chr2	74483088	74494559	chr2:74483088-74494559	0	+	74483088	74483088	8553170	7	47,89,941,81,965,102,1635,	0,233,7155,8206,8392,9557,9836,
#Partially deleted in new
chr2	74483100	74491558	chr2:74483100-74491558	0	+	74483100	74483100	8553170	7	35,89,449,84,57,81,78,	0,221,6924,7555,8027,8194,8380,
#Partially deleted in new
chr2	74483104	74491649	chr2:74483104-74491649	0	+	74483104	74483104	8553170	7	31,242,230,84,57,81,169,	0,217,7139,7551,8023,8190,8376,
#Deleted in new
chr2	74491569	74492813	chr2:74491569-74492813	0	+	74491569	74491569	8553170	5	97,112,91,142,168,	0,374,569,734,1076,
#Deleted in new
chr2	74491583	74493311	chr2:74491583-74493311	0	+	74491583	74493218	789624	6	89,52,91,142,72,387,	0,420,555,720,1092,1341,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	74497516	74499716	chr2:74497516-74499716	1	-	74497926	74499537	789624	2	802,384,	0,1816,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	74497516	74503316	chr2:74497516-74503316	1	-	74497926	74502859	789624	2	802,650,	0,5150,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	74497581	74502984	chr2:74497581-74502984	3	-	74498168	74502859	789624	2	737,149,	0,5254,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	74497581	74503216	chr2:74497581-74503216	0	-	74497581	74497581	8553170	3	737,118,381,	0,3915,5254,
#Deleted in new
chr2	74498687	74499367	chr2:74498687-74499367	0	-	74498687	74498687	8553170	2	377,35,	0,645,
#Deleted in new
chr2	74499274	74499542	chr2:74499274-74499542	0	-	74499274	74499274	8553170	1	268,	0,
#Deleted in new
chr2	74501716	74502365	chr2:74501716-74502365	3	+	74501716	74501716	8553170	1	649,	0,
#Deleted in new
chr2	74502594	74504678	chr2:74502594-74504678	3	+	74502594	74502594	8553170	2	813,1039,	0,1045,
#Deleted in new
chr2	74502594	74504677	chr2:74502594-74504677	1	+	74502594	74502594	789624	1	2083,	0,
#Partially deleted in new
chr2	74505042	74508580	chr2:74505042-74508580	3	-	74505142	74507668	0	9	148,81,87,34,106,72,153,106,1005,	0,296,509,694,909,1138,1689,1999,2533,
#Partially deleted in new
chr2	74505042	74507151	chr2:74505042-74507151	0	-	74505042	74505042	8553170	6	148,81,61,34,153,110,	0,296,509,694,1689,1999,
#Partially deleted in new
chr2	74505042	74507416	chr2:74505042-74507416	0	-	74505042	74505042	8553170	8	148,81,87,34,106,72,153,375,	0,296,509,694,909,1138,1689,1999,
#Deleted in new
chr2	74505045	74505610	chr2:74505045-74505610	0	-	74505045	74505045	8553170	2	374,59,	0,506,
#Partially deleted in new
chr2	74505145	74507417	chr2:74505145-74507417	0	-	74505145	74505145	8553170	9	45,81,61,34,106,72,153,106,60,	0,193,406,591,806,1035,1586,1896,2212,
#Deleted in new
chr2	74505367	74505726	chr2:74505367-74505726	0	-	74505367	74505367	8553170	2	52,175,	0,184,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	74506400	74507394	chr2:74506400-74507394	0	-	74506400	74506400	8553170	2	484,353,	0,641,
#Deleted in new
chr2	74513462	74515661	chr2:74513462-74515661	0	+	74513462	74513462	8553170	4	283,238,185,29,	0,534,1559,2170,
#Deleted in new
chr2	74513558	74516761	chr2:74513558-74516761	1	+	74514223	74516431	789624	4	187,238,238,789,	0,438,2074,2414,
#Deleted in new
chr2	74513615	74514352	chr2:74513615-74514352	0	+	74513615	74513615	8553170	2	130,356,	0,381,
#Deleted in new
chr2	74514483	74517147	chr2:74514483-74517147	3	+	74514806	74516189	0	3	723,238,1175,	0,1149,1489,
#Partially deleted in new
chr2	74518130	74526191	chr2:74518130-74526191	1	-	74518445	74525729	789624	12	472,191,191,120,192,159,100,228,385,194,256,52,	0,909,1425,1784,4449,4725,4988,5179,5792,6878,7362,8009,
#Partially deleted in new
chr2	74518130	74526336	chr2:74518130-74526336	3	-	74518445	74525729	789624	12	472,191,191,120,192,159,100,228,385,194,256,201,	0,909,1425,1784,4449,4725,4988,5179,5792,6878,7362,8005,
#Partially deleted in new
chr2	74518130	74523925	chr2:74518130-74523925	0	-	74522978	74523925	789624	9	472,191,191,120,192,191,100,228,3,	0,909,1425,1784,4449,4725,4988,5179,5792,
#Partially deleted in new
chr2	74519585	74526281	chr2:74519585-74526281	0	-	74519585	74519585	8553170	8	161,120,192,682,385,194,256,146,	0,329,2994,3270,4337,5423,5907,6550,
#Partially deleted in new
chr2	74519585	74523302	chr2:74519585-74523302	0	-	74519585	74519585	8553170	5	161,120,192,175,184,	0,329,2994,3270,3533,
#Partially deleted in new
chr2	74523338	74524256	chr2:74523338-74524256	0	-	74523338	74523338	8553170	2	199,390,	0,528,
#Partially deleted in new
chr2	74524027	74526216	chr2:74524027-74526216	0	-	74524027	74525085	789624	3	280,194,81,	0,981,2108,
#Partially deleted in new
chr2	74524266	74526194	chr2:74524266-74526194	0	-	74524266	74524266	8553170	2	41,59,	0,1869,
#Deleted in new
chr2	74526644	74529760	chr2:74526644-74529760	0	-	74527076	74529629	789624	12	192,181,116,120,103,67,74,73,185,151,138,181,	0,296,603,826,1091,1295,1603,1772,2106,2487,2717,2935,
#Deleted in new
chr2	74526647	74529939	chr2:74526647-74529939	3	-	74526799	74529629	789624	12	189,119,116,120,103,67,74,73,185,151,138,360,	0,293,600,823,1088,1292,1600,1769,2103,2484,2714,2932,
#Deleted in new
chr2	74526651	74529697	chr2:74526651-74529697	0	-	74526651	74526651	8553170	11	185,119,116,120,103,67,74,73,532,138,118,	0,289,596,819,1084,1288,1596,1765,2099,2710,2928,
#Deleted in new
chr2	74526688	74529685	chr2:74526688-74529685	0	-	74526688	74526688	8553170	11	148,181,116,120,103,67,74,73,532,138,106,	0,252,559,782,1047,1251,1559,1728,2062,2673,2891,
#Deleted in new
chr2	74526745	74528085	chr2:74526745-74528085	0	-	74526745	74526745	8553170	4	91,423,120,350,	0,195,725,990,
#Deleted in new
chr2	74527031	74527614	chr2:74527031-74527614	0	-	74527031	74527031	8553170	2	90,367,	0,216,
#Deleted in new
chr2	74527735	74528936	chr2:74527735-74528936	0	-	74527735	74527735	8553170	3	586,73,186,	0,681,1015,
#Deleted in new
chr2	74528821	74529760	chr2:74528821-74529760	0	-	74528821	74528821	8553170	3	114,368,181,	0,310,758,
#Deleted in new
chr2	74529376	74533348	chr2:74529376-74533348	3	+	74530006	74532985	0	8	1136,205,195,33,106,70,96,529,	0,1240,1534,1962,2220,2479,3242,3443,
#Deleted in new
chr2	74529724	74533152	chr2:74529724-74533152	0	+	74529724	74529724	8553170	9	188,68,205,195,33,106,70,96,333,	0,720,892,1186,1614,1872,2131,2894,3095,
#Deleted in new
chr2	74529774	74533247	chr2:74529774-74533247	0	+	74529774	74529774	8553170	9	138,52,205,195,33,106,70,96,428,	0,686,842,1136,1564,1822,2081,2844,3045,
#Deleted in new
chr2	74529821	74531925	chr2:74529821-74531925	0	+	74529821	74529821	8553170	6	91,205,195,73,106,70,	0,795,1089,1517,1775,2034,
#Deleted in new
chr2	74529989	74533332	chr2:74529989-74533332	1	+	74530006	74532985	0	6	523,205,33,106,70,513,	0,627,1349,1607,1866,2830,
#Deleted in new
chr2	74530045	74533192	chr2:74530045-74533192	0	+	74530045	74532985	789624	7	467,205,195,33,136,70,373,	0,571,865,1293,1521,1810,2774,
#Deleted in new
chr2	74530168	74533316	chr2:74530168-74533316	0	+	74530168	74530168	8553170	7	344,205,195,364,70,96,497,	0,448,742,1170,1687,2450,2651,
#Deleted in new
chr2	74530425	74531363	chr2:74530425-74531363	0	+	74530425	74530425	8553170	3	87,205,453,	0,191,485,
#Deleted in new
chr2	74530596	74531249	chr2:74530596-74531249	0	+	74530596	74530596	8553170	2	225,339,	0,314,
#Deleted in new
chr2	74530610	74531912	chr2:74530610-74531912	0	+	74530610	74530610	8553170	3	211,195,574,	0,300,728,
#Partially deleted in new
chr2	74532413	74549663	chr2:74532413-74549663	0	-	74532413	74532413	8553170	10	1266,112,137,116,244,163,168,155,181,295,	0,1468,1686,1902,2117,2878,3174,3582,3877,16955,
#Partially deleted in new
chr2	74532437	74553935	chr2:74532437-74553935	3	-	74533605	74552634	789624	14	1242,112,137,116,244,163,168,155,181,220,215,164,325,60,	0,1444,1662,1878,2093,2854,3150,3558,3853,4271,16931,17747,19884,21438,
#Partially deleted in new
chr2	74532603	74552647	chr2:74532603-74552647	1	-	74533605	74552634	789624	8	1076,112,137,181,220,215,164,326,	0,1278,1496,3687,4105,16765,17581,19718,
#Partially deleted in new
chr2	74533129	74553958	chr2:74533129-74553958	1	-	74533605	74552634	789624	12	550,112,137,116,244,163,168,155,181,164,325,83,	0,752,970,1186,1401,2162,2458,2866,3161,17055,19192,20746,
#Partially deleted in new
chr2	74533252	74553084	chr2:74533252-74553084	1	-	74533605	74552634	789624	12	427,112,137,116,244,163,155,181,220,215,164,763,	0,629,847,1063,1278,2039,2743,3038,3456,16116,16932,19069,
#Partially deleted in new
chr2	74533727	74553961	chr2:74533727-74553961	1	-	74533873	74552634	789624	11	266,137,116,244,163,168,155,181,164,325,86,	0,372,588,803,1564,1860,2268,2563,16457,18594,20148,
#Partially deleted in new
chr2	74535288	74549576	chr2:74535288-74549576	0	-	74535288	74535288	8553170	4	166,155,181,208,	0,707,1002,14080,
#Partially deleted in new
chr2	74535643	74549459	chr2:74535643-74549459	0	-	74535643	74549459	789624	4	112,155,181,91,	0,352,647,13725,
#Partially deleted in new
chr2	74536710	74555690	chr2:74536710-74555690	0	-	74536710	74552634	789624	5	218,215,164,325,79,	0,12658,13474,15611,18901,
#Partially deleted in new
chr2	74539792	74552647	chr2:74539792-74552647	0	-	74539792	74539792	8553170	4	57,215,164,326,	0,9576,10392,12529,
#Partially deleted in new
chr2	74549025	74557536	chr2:74549025-74557536	1	+	74555631	74557114	0	5	147,300,94,185,1229,	0,6128,6549,6868,7282,
#Partially deleted in new
chr2	74549070	74555387	chr2:74549070-74555387	0	+	74549070	74549070	8553170	4	102,159,66,234,	0,342,5723,6083,
#Deleted in new
chr2	74554085	74557554	chr2:74554085-74557554	3	+	74554754	74557114	0	5	729,300,94,185,1247,	0,1068,1489,1808,2222,
#Deleted in new
chr2	74554159	74555231	chr2:74554159-74555231	0	+	74554159	74554159	8553170	3	388,93,76,	0,562,996,
#Deleted in new
chr2	74554730	74557551	chr2:74554730-74557551	1	+	74554754	74556387	0	4	84,300,94,1244,	0,423,844,1577,
#Deleted in new
chr2	74554733	74557185	chr2:74554733-74557185	0	+	74554733	74554733	8553170	4	81,298,90,878,	0,422,845,1574,
#Deleted in new
chr2	74554737	74555636	chr2:74554737-74555636	0	+	74554737	74554737	8553170	2	77,483,	0,416,
#Deleted in new
chr2	74554737	74557114	chr2:74554737-74557114	0	+	74554737	74554737	8553170	5	77,298,94,185,807,	0,418,837,1156,1570,
#Deleted in new
chr2	74554737	74555597	chr2:74554737-74555597	0	+	74554737	74554737	8553170	2	122,444,	0,416,
#Deleted in new
chr2	74554741	74556776	chr2:74554741-74556776	0	+	74554741	74554741	8553170	4	73,129,185,469,	0,412,1152,1566,
#Deleted in new
chr2	74554749	74555926	chr2:74554749-74555926	0	+	74554749	74554749	8553170	4	110,298,94,33,	0,406,825,1144,
#Deleted in new
chr2	74555131	74557513	chr2:74555131-74557513	0	+	74555131	74555131	8553170	4	322,94,185,1206,	0,443,762,1176,
#Deleted in new
chr2	74555205	74556621	chr2:74555205-74556621	0	+	74555205	74555911	789624	3	248,185,314,	0,688,1102,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	74557882	74648037	chr2:74557882-74648037	3	-	74558715	74640275	789624	11	992,12,141,207,142,163,174,169,186,292,65,	0,1815,2268,4334,17555,18573,23791,49172,57081,82153,90090,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	74557891	74640327	chr2:74557891-74640327	1	-	74558715	74640275	789624	9	983,141,207,142,163,174,169,186,292,	0,2259,4325,17546,18564,23782,49163,57072,82144,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	74557891	74576939	chr2:74557891-74576939	0	-	74557891	74557891	8553170	6	983,141,207,142,163,55,	0,2259,4325,17546,18564,18993,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	74557891	74648338	chr2:74557891-74648338	1	-	74558715	74640275	789624	10	983,141,207,142,163,174,169,186,292,74,	0,2259,4325,17546,18564,23782,49163,57072,82144,90373,
#Partially deleted in new
chr2	74558649	74575489	chr2:74558649-74575489	0	-	74558649	74558649	8553170	2	225,52,	0,16788,
#Partially deleted in new
chr2	74575493	74648338	chr2:74575493-74648338	0	-	74581805	74640275	789624	5	86,163,174,292,74,	0,962,6180,64542,72771,
#Partially deleted in new
chr2	74581794	74648309	chr2:74581794-74648309	0	-	74581805	74640275	789624	4	53,186,292,45,	0,33169,58241,66470,
#Partially deleted in new
chr2	74607153	74615824	chr2:74607153-74615824	0	-	74607153	74607153	8553170	3	70,186,328,	0,7810,8343,
#Partially deleted in new
chr2	74614963	74648330	chr2:74614963-74648330	0	-	74614963	74640275	789624	3	186,292,66,	0,25072,33301,
#Deleted in new
chr2	74618855	74620979	chr2:74618855-74620979	7	-	74618855	74618855	16724991	2	528,285,	0,1839,
#Deleted in new
chr2	74628327	74628942	chr2:74628327-74628942	7	-	74628327	74628327	16724991	1	615,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	74654227	74682059	chr2:74654227-74682059	3	+	74654376	74680209	789624	14	294,152,60,99,94,120,152,179,148,223,110,161,59,2461,	0,2306,3337,3625,8504,19229,19449,20270,20660,20934,21297,21521,25048,25371,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	74654227	74683853	chr2:74654227-74683853	1	+	74654376	74680209	789624	13	294,152,60,94,120,152,179,148,223,110,161,59,4255,	0,2306,3337,8504,19229,19449,20270,20660,20934,21297,21521,25048,25371,
#Partially deleted in new
chr2	74654251	74680209	chr2:74654251-74680209	0	+	74654376	74673483	789624	12	270,152,60,99,120,179,148,223,110,161,59,611,	0,2282,3313,3601,19205,20246,20636,20910,21273,21497,25024,25347,
#Partially deleted in new
chr2	74654276	74673828	chr2:74654276-74673828	0	+	74654376	74657569	789624	4	245,60,120,152,	0,3288,19180,19400,
#Partially deleted in new
chr2	74654279	74680441	chr2:74654279-74680441	1	+	74654376	74680209	789624	10	242,152,60,179,148,223,110,161,59,843,	0,2254,3285,20218,20608,20882,21245,21469,24996,25319,
#Partially deleted in new
chr2	74654292	74673499	chr2:74654292-74673499	0	+	74654376	74673499	789624	5	229,152,60,94,43,	0,2241,3272,8439,19164,
#Partially deleted in new
chr2	74654310	74657611	chr2:74654310-74657611	0	+	74654376	74655328	789624	4	211,121,152,47,	0,956,2223,3254,
#Partially deleted in new
chr2	74654310	74674676	chr2:74654310-74674676	0	+	74654376	74674676	789624	4	211,152,60,179,	0,2223,3254,20187,
#Partially deleted in new
chr2	74654361	74680746	chr2:74654361-74680746	0	+	74654376	74673483	789624	12	160,152,60,120,152,179,148,223,110,161,59,1148,	0,2172,3203,19095,19315,20136,20526,20800,21163,21387,24914,25237,
#Partially deleted in new
chr2	74674922	74679927	chr2:74674922-74679927	0	+	74674922	74674922	8553170	5	113,110,161,59,329,	0,602,826,4353,4676,
#Deleted in new
chr2	74754669	74754819	chr2:74754669-74754819	7	-	74754669	74754669	16724991	1	150,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	74832654	74833987	chr2:74832654-74833987	3	-	74832654	74832654	8553170	1	1333,	0,
#Partially deleted in new
chr2	74833980	74893359	chr2:74833980-74893359	3	+	74834580	74890941	0	18	663,163,149,120,96,100,184,156,234,305,149,120,96,100,184,156,234,2563,	0,20312,33655,38319,39295,39863,40285,43185,44707,46284,47730,48139,51513,52313,52509,53922,55264,56816,
#Partially deleted in new
chr2	74835169	74893359	chr2:74835169-74893359	1	+	74854313	74890941	789624	18	169,163,149,120,96,100,184,156,234,305,149,120,96,100,184,156,234,2563,	0,19123,32466,37130,38106,38674,39096,41996,43518,45095,46541,46950,50324,51124,51320,52733,54075,55627,
#Partially deleted in new
chr2	74854332	74867907	chr2:74854332-74867907	0	+	74854332	74854332	8553170	2	123,272,	0,13303,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	74918147	74932794	chr2:74918147-74932794	3	+	74918147	74918147	8553170	3	312,119,134,	0,13270,14513,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	74919554	74924846	chr2:74919554-74924846	3	-	74919554	74919554	8553170	2	732,31,	0,5261,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	74928238	74933024	chr2:74928238-74933024	1	+	74928238	74928238	8553170	2	3298,364,	0,4422,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	74931427	74938418	chr2:74931427-74938418	1	+	74931427	74931427	789624	4	109,91,130,111,	0,771,1233,6880,
#Deleted in new
chr2	74940257	74942670	chr2:74940257-74942670	3	+	74940257	74940257	8553170	2	482,784,	0,1629,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	74958491	74970128	chr2:74958491-74970128	3	+	74958679	74969422	789624	4	401,85,42,720,	0,849,1613,10917,
#Deleted in new
chr2	74958704	74960236	chr2:74958704-74960236	0	+	74958704	74958704	8553170	3	188,85,132,	0,636,1400,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	74958705	74961504	chr2:74958705-74961504	0	+	74958705	74958705	8553170	4	187,85,42,446,	0,635,1399,2353,
#Partially deleted in new
chr2	74958791	74969731	chr2:74958791-74969731	0	+	74958791	74958791	8553170	5	101,85,51,42,323,	0,549,914,1313,10617,
#Partially deleted in new
chr2	74959005	74969723	chr2:74959005-74969723	0	+	74959005	74959005	8553170	4	86,85,42,315,	0,335,1099,10403,
#Deleted in new
chr2	74959110	74960146	chr2:74959110-74960146	0	+	74959110	74959110	8553170	2	315,42,	0,994,
#Partially deleted in new
chr2	75046462	75199700	chr2:75046462-75199700	3	-	75049431	75198934	0	5	3261,197,151,195,1155,	0,4788,7142,74111,152083,
#Partially deleted in new
chr2	75051035	75199057	chr2:75051035-75199057	1	-	75051246	75198934	0	4	412,151,195,512,	0,2569,69538,147510,
#Deleted in new
chr2	75090811	75090914	chr2:75090811-75090914	3	+	75090811	75090811	5263520	1	103,	0,
#Partially deleted in new
chr2	75118806	75120766	chr2:75118806-75120766	0	-	75118806	75118806	8553170	2	134,193,	0,1767,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	75154365	75189949	chr2:75154365-75189949	3	+	75154365	75154365	8553170	3	206,112,3120,	0,1838,32464,
#Deleted in new
chr2	75455993	75456578	chr2:75455993-75456578	7	-	75455993	75455993	16724991	1	585,	0,
#Partially deleted in new
chr2	75469301	75560936	chr2:75469301-75560936	0	-	75469301	75469301	8553170	3	69,153,257,	0,48754,91378,
#Partially deleted in new
chr2	75469301	75560923	chr2:75469301-75560923	0	-	75469301	75469301	8553170	4	69,153,123,244,	0,48754,53063,91378,
#Partially deleted in new
chr2	75474452	75482579	chr2:75474452-75482579	3	+	75474452	75474452	8553170	2	194,142,	0,7985,
#Deleted in new
chr2	75489575	75489710	chr2:75489575-75489710	3	+	75489575	75489575	8553170	1	135,	0,
#Partially deleted in new
chr2	75492317	75569722	chr2:75492317-75569722	3	-	75493235	75518140	789624	4	1292,153,123,247,	0,25738,30047,77158,
#Partially deleted in new
chr2	75492317	75560913	chr2:75492317-75560913	1	-	75493235	75518140	789624	4	1292,153,123,234,	0,25738,30047,68362,
#Partially deleted in new
chr2	75492485	75560938	chr2:75492485-75560938	1	-	75493235	75518140	789624	5	1124,153,123,88,259,	0,25570,29879,33626,68194,
#Partially deleted in new
chr2	75493073	75517972	chr2:75493073-75517972	1	-	75493235	75517861	789624	2	536,160,	0,24739,
#Partially deleted in new
chr2	75493150	75561298	chr2:75493150-75561298	1	-	75493235	75518140	789624	4	459,153,123,42,	0,24905,29214,68106,
#Partially deleted in new
chr2	75493266	75561329	chr2:75493266-75561329	0	-	75493266	75518140	789624	3	343,153,73,	0,24789,67990,
#Partially deleted in new
chr2	75493391	75518703	chr2:75493391-75518703	0	-	75493391	75518140	789624	3	218,153,63,	0,24664,25249,
#Partially deleted in new
chr2	75518057	75569698	chr2:75518057-75569698	0	-	75518057	75518057	8553170	4	151,123,88,223,	0,4307,8054,51418,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	75524067	75542706	chr2:75524067-75542706	3	+	75524067	75524067	789624	3	84,132,969,	0,16671,17670,
#Partially deleted in new
chr2	75558482	75561323	chr2:75558482-75561323	0	-	75558482	75558482	8553170	3	217,240,67,	0,2197,2774,
#Deleted in new
chr2	75598070	75598559	chr2:75598070-75598559	7	+	75598070	75598070	16724991	1	489,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	75627949	75628168	chr2:75627949-75628168	3	+	75627949	75627949	8553170	1	219,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	75646782	75657860	chr2:75646782-75657860	1	+	75646807	75655285	0	6	128,118,119,135,182,2797,	0,319,5359,5740,7953,8281,
#Deleted in new
chr2	75646782	75647693	chr2:75646782-75647693	0	+	75646782	75646782	8553170	2	128,592,	0,319,
#Partially deleted in new
chr2	75646793	75690759	chr2:75646793-75690759	1	+	75646807	75679821	789624	6	117,118,119,135,78,126,	0,308,5348,5729,32981,43840,
#Partially deleted in new
chr2	75646802	75670753	chr2:75646802-75670753	3	+	75646807	75655285	0	7	108,118,119,135,182,239,175,	0,299,5339,5720,7933,8261,23776,
#Partially deleted in new
chr2	75646978	75655130	chr2:75646978-75655130	0	+	75652214	75655130	789624	5	241,119,135,182,67,	0,5163,5544,7757,8085,
#Deleted in new
chr2	75651287	75651627	chr2:75651287-75651627	7	-	75651287	75651287	16724991	1	340,	0,
#Partially deleted in new
chr2	75651999	75665941	chr2:75651999-75665941	0	-	75664665	75665941	789624	3	188,222,13,	0,12562,13929,
#Partially deleted in new
chr2	75654787	75670807	chr2:75654787-75670807	0	+	75654787	75670623	789624	2	130,229,	0,15791,
#Partially deleted in new
chr2	75654899	75690851	chr2:75654899-75690851	0	+	75654899	75655285	789624	3	18,239,218,	0,164,35734,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	75660461	75662208	chr2:75660461-75662208	3	+	75660461	75660461	8553170	1	1747,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	75662705	75710989	chr2:75662705-75710989	3	-	75664665	75710855	789624	17	2078,125,147,67,77,122,151,200,113,82,124,187,116,98,225,129,399,	0,3223,7432,9244,10738,17487,25121,26320,27263,27932,29271,31535,33494,38484,39493,43817,47885,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	75662705	75701372	chr2:75662705-75701372	0	-	75662705	75662705	8553170	13	2078,125,147,67,77,122,151,200,113,82,187,116,183,	0,3223,7432,9244,10738,17487,25121,26320,27263,27932,31535,33494,38484,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	75662707	75710985	chr2:75662707-75710985	1	-	75694379	75710855	789624	16	2076,125,147,67,77,122,151,200,113,82,124,187,98,225,129,395,	0,3221,7430,9242,10736,17485,25119,26318,27261,27930,29269,31533,38482,39491,43815,47883,
#Partially deleted in new
chr2	75664417	75670214	chr2:75664417-75670214	0	-	75664777	75670214	789624	2	366,77,	0,5720,
#Partially deleted in new
chr2	75664418	75710892	chr2:75664418-75710892	1	-	75664665	75710855	789624	17	365,125,147,67,77,122,151,200,113,82,124,187,116,98,111,129,302,	0,1510,5719,7531,9025,15774,23408,24607,25550,26219,27558,29822,31781,36771,37894,42104,46172,
#Partially deleted in new
chr2	75664633	75687892	chr2:75664633-75687892	0	-	75664665	75687892	789624	6	150,125,147,67,77,66,	0,1295,5504,7316,8810,23193,
#Partially deleted in new
chr2	75664644	75710606	chr2:75664644-75710606	0	-	75710498	75710606	789624	17	139,125,147,67,77,122,151,200,113,82,124,187,116,98,225,129,163,	0,1284,5493,7305,8799,15548,23182,24381,25324,25993,27332,29596,31555,36545,37554,41878,45799,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	75669988	75670454	chr2:75669988-75670454	3	+	75669988	75669988	8553170	1	466,	0,
#Partially deleted in new
chr2	75690487	75694479	chr2:75690487-75694479	0	-	75690487	75690487	8553170	3	232,124,239,	0,1489,3753,
#Partially deleted in new
chr2	75696251	75710941	chr2:75696251-75710941	0	-	75696251	75710855	789624	4	64,98,129,351,	0,4938,10271,14339,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	75697582	75697996	chr2:75697582-75697996	3	+	75697582	75697582	8553170	1	414,	0,
#Partially deleted in new
chr2	75701795	75710899	chr2:75701795-75710899	1	-	75702169	75710855	789624	3	628,129,309,	0,4727,8795,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	75719119	75720018	chr2:75719119-75720018	3	+	75719119	75719119	8553170	1	899,	0,
#Deleted in new
chr2	76106015	76107324	chr2:76106015-76107324	7	-	76106015	76106015	16724991	1	1309,	0,
#Deleted in new
chr2	76258033	76258897	chr2:76258033-76258897	7	-	76258033	76258033	16724991	1	864,	0,
#Deleted in new
chr2	76260754	76261661	chr2:76260754-76261661	7	-	76260754	76260754	16724991	1	907,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	76445078	76445410	chr2:76445078-76445410	3	-	76445078	76445078	8553170	1	332,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	76595412	76595678	chr2:76595412-76595678	3	-	76595412	76595412	8553170	1	266,	0,
#Partially deleted in new
chr2	76747718	77522339	chr2:76747718-77522339	1	-	76748694	77522115	789624	3	1198,1547,231,	0,770599,774390,
#Partially deleted in new
chr2	76748552	77522273	chr2:76748552-77522273	1	-	76748694	77521671	789624	4	364,1547,151,165,	0,769765,773115,773556,
#Partially deleted in new
chr2	76748557	77522368	chr2:76748557-77522368	3	-	76748694	77521671	789624	4	359,1547,81,260,	0,769760,773110,773551,
#Deleted in new
chr2	76772908	76773045	chr2:76772908-76773045	7	+	76772908	76772908	16724991	1	137,	0,
#Partially deleted in new
chr2	76985964	77009791	chr2:76985964-77009791	3	+	76985964	76985964	789624	4	37,89,106,768,	0,1441,3856,23059,
#Deleted in new
chr2	77516667	77522376	chr2:77516667-77522376	1	-	77518311	77521671	789624	3	3197,151,268,	0,5000,5441,
#Deleted in new
chr2	77517515	77522210	chr2:77517515-77522210	1	-	77518311	77522115	789624	2	2349,102,	0,4593,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	77519761	77593196	chr2:77519761-77593196	0	-	77519761	77519835	789624	2	103,382,	0,73053,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	77552565	77593319	chr2:77552565-77593319	0	-	77552565	77552565	8553170	2	91,505,	0,40249,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	77652412	77654668	chr2:77652412-77654668	3	-	77652412	77652412	8553170	2	197,87,	0,2169,
#Deleted in new
chr2	77672214	77673792	chr2:77672214-77673792	3	+	77672214	77672214	8553170	2	55,742,	0,836,
#Partially deleted in new
chr2	77788381	77793087	chr2:77788381-77793087	7	+	77788381	77788381	16724991	2	130,288,	0,4418,
#Deleted in new
chr2	77792820	77793025	chr2:77792820-77793025	5	+	77792820	77792820	16724991	1	205,	0,
#Partially deleted in new
chr2	77915933	77918011	chr2:77915933-77918011	3	+	77915933	77915933	789624	3	160,168,309,	0,1303,1769,
#Deleted in new
chr2	78412792	78413094	chr2:78412792-78413094	7	-	78412792	78412792	16724991	1	302,	0,
#Deleted in new
chr2	78437849	78438921	chr2:78437849-78438921	7	+	78437849	78437849	16724991	1	1072,	0,
#Partially deleted in new
chr2	78597910	78599406	chr2:78597910-78599406	3	+	78597910	78597910	8553170	2	33,338,	0,1158,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	78882446	78882552	chr2:78882446-78882552	3	+	78882446	78882446	8553170	1	106,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	78882627	78882734	chr2:78882627-78882734	3	+	78882627	78882627	8553170	1	107,	0,
#Deleted in new
chr2	79025685	79028505	chr2:79025685-79028505	3	+	79026093	79028276	789624	6	88,87,119,138,127,297,	0,397,1027,1348,2121,2523,
#Deleted in new
chr2	79025700	79028502	chr2:79025700-79028502	1	+	79026093	79028276	789624	6	73,187,119,138,127,294,	0,282,1012,1333,2106,2508,
#Deleted in new
chr2	79025726	79028303	chr2:79025726-79028303	1	+	79026093	79028276	789624	5	47,187,119,127,95,	0,256,986,2080,2482,
#Deleted in new
chr2	79025747	79026957	chr2:79025747-79026957	0	+	79025747	79025747	8553170	3	167,187,245,	0,235,965,
#Deleted in new
chr2	79026082	79027250	chr2:79026082-79027250	0	+	79026082	79026082	8553170	2	749,217,	0,951,
#Deleted in new
chr2	79085029	79086847	chr2:79085029-79086847	0	-	79085205	79086847	789624	4	254,198,138,36,	0,376,1337,1782,
#Deleted in new
chr2	79085030	79087993	chr2:79085030-79087993	3	-	79085215	79087612	789624	6	253,112,138,119,110,35,	0,461,1336,1781,2518,2928,
#Deleted in new
chr2	79085539	79088019	chr2:79085539-79088019	0	-	79085539	79085539	8553170	4	965,119,110,61,	0,1272,2009,2419,
#Deleted in new
chr2	79085874	79088017	chr2:79085874-79088017	0	-	79085874	79085874	8553170	3	1056,110,59,	0,1674,2084,
#Deleted in new
chr2	79087114	79087993	chr2:79087114-79087993	0	-	79087114	79087114	8553170	2	544,35,	0,844,
#Deleted in new
chr2	79120361	79122199	chr2:79120361-79122199	0	+	79120361	79120361	8553170	3	153,110,638,	0,454,1200,
#Deleted in new
chr2	79120457	79123419	chr2:79120457-79123419	3	+	79120861	79123215	0	6	57,110,119,138,112,272,	0,358,1104,1530,2383,2690,
#Deleted in new
chr2	79120489	79121690	chr2:79120489-79121690	0	+	79120489	79120489	8553170	2	436,129,	0,1072,
#Deleted in new
chr2	79120834	79123091	chr2:79120834-79123091	0	+	79120834	79120834	8553170	4	91,119,138,251,	0,727,1153,2006,
#Deleted in new
chr2	79135502	79138427	chr2:79135502-79138427	5	-	79135502	79135502	16724991	4	1425,114,110,56,	0,1721,2464,2869,
#Deleted in new
chr2	79135502	79138427	chr2:79135502-79138427	7	-	79135502	79135502	16724991	4	1425,119,110,56,	0,1721,2464,2869,
#Deleted in new
chr2	79135700	79138030	chr2:79135700-79138030	5	-	79135700	79135700	16724991	5	63,112,138,119,64,	0,264,1089,1523,2266,
#Deleted in new
chr2	79136864	79138369	chr2:79136864-79138369	4	-	79136864	79136864	16724991	3	63,114,403,	0,359,1102,
#Deleted in new
chr2	79136887	79138369	chr2:79136887-79138369	4	-	79136887	79136887	16724991	3	40,119,403,	0,336,1079,
#Deleted in new
chr2	79136934	79138427	chr2:79136934-79138427	5	-	79136934	79136934	16724991	3	403,110,56,	0,1032,1437,
#Deleted in new
chr2	79137672	79138427	chr2:79137672-79138427	5	-	79137672	79137672	16724991	2	404,56,	0,699,
#Deleted in new
chr2	79157002	79159753	chr2:79157002-79159753	3	-	79157225	79159405	0	6	291,127,138,119,87,26,	0,569,1323,1648,2327,2725,
#Deleted in new
chr2	79157006	79159753	chr2:79157006-79159753	1	-	79157225	79159405	0	5	287,127,138,119,424,	0,565,1319,1644,2323,
#Deleted in new
chr2	79157091	79159749	chr2:79157091-79159749	1	-	79157225	79159405	0	6	202,127,138,119,110,22,	0,480,1234,1559,2238,2636,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	79158373	79185523	chr2:79158373-79185523	3	+	79158373	79158373	8553170	3	153,52,286,	0,26283,26864,
#Deleted in new
chr2	79158647	79159753	chr2:79158647-79159753	0	-	79158647	79158647	8553170	2	122,424,	0,682,
#Deleted in new
chr2	79158848	79159744	chr2:79158848-79159744	0	-	79158848	79158848	8553170	2	568,17,	0,879,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr2	79185230	80648779	chr2:79185230-80648779	3	+	79651556	80647872	789624	22	201,118,88,183,129,107,196,167,120,267,204,81,153,93,157,201,152,114,182,106,135,1195,	0,12728,127478,188600,319823,466321,559156,672782,684585,688845,724363,1207980,1234218,1359751,1360676,1370462,1388932,1396475,1404073,1418843,1422953,1462354,
#Partially deleted in new
chr2	79281463	79340163	chr2:79281463-79340163	0	+	79281463	79281463	8553170	6	72,88,13,96,248,216,	0,31245,38248,38346,58151,58484,
#Partially deleted in new
chr2	79292975	79319893	chr2:79292975-79319893	0	+	79292975	79292975	8553170	3	302,88,182,	0,19733,26736,
#Partially deleted in new
chr2	79312709	79340171	chr2:79312709-79340171	0	+	79312709	79312709	8553170	4	87,36,248,224,	0,7263,26905,27238,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	79493715	79500844	chr2:79493715-79500844	3	-	79493715	79493715	789624	5	181,86,153,66,183,	0,4354,5209,5461,6946,
#Partially deleted in new
chr2	79512999	80648780	chr2:79512999-80648780	1	+	79651556	80647872	789624	18	208,107,196,167,120,267,204,81,153,93,157,201,152,114,182,106,135,1196,	0,138552,231387,345013,356816,361076,396594,880211,906449,1031982,1032907,1042693,1061163,1068706,1076304,1091074,1095184,1134585,
#Partially deleted in new
chr2	79513033	79744483	chr2:79513033-79744483	0	+	79651556	79744483	789624	4	174,143,107,97,	0,120664,138518,231353,
#Partially deleted in new
chr2	79513134	80648378	chr2:79513134-80648378	1	+	79651556	80647872	789624	17	73,107,196,167,120,267,204,81,153,93,157,201,152,114,182,106,794,	0,138417,231252,344878,356681,360941,396459,880076,906314,1031847,1032772,1042558,1061028,1068571,1076169,1090939,1134450,
#Partially deleted in new
chr2	79514621	79858066	chr2:79514621-79858066	0	+	79651556	79858066	789624	5	70,114,107,196,54,	0,10035,136930,229765,343391,
#Deleted in new
chr2	79547150	79548128	chr2:79547150-79548128	7	-	79547150	79547150	16724991	1	978,	0,
#Partially deleted in new
chr2	79573763	79575593	chr2:79573763-79575593	7	-	79573763	79573763	16724991	2	440,148,	0,1682,
#Partially deleted in new
chr2	79634540	79687729	chr2:79634540-79687729	1	+	79651556	79687596	789624	3	159,107,166,	0,17011,53023,
#Deleted in new
chr2	79636861	79636963	chr2:79636861-79636963	3	-	79636861	79636861	8553170	1	102,	0,
#Deleted in new
chr2	79649293	79649359	chr2:79649293-79649359	3	-	79649293	79649293	5263520	1	66,	0,
#Partially deleted in new
chr2	79651551	80648689	chr2:79651551-80648689	1	+	79651556	80647872	789624	18	107,196,167,120,267,204,81,153,93,157,201,152,114,182,106,135,144,1105,	0,92835,206461,218264,222524,258042,741659,767897,893430,894355,904141,922611,930154,937752,952522,956632,967533,996033,
#Partially deleted in new
chr2	79697845	79777101	chr2:79697845-79777101	0	+	79697845	79697845	8553170	3	72,196,116,	0,46541,79140,
#Deleted in new
chr2	79866494	79866583	chr2:79866494-79866583	3	-	79866494	79866494	5263520	1	89,	0,
#Partially deleted in new
chr2	80028011	80030551	chr2:80028011-80030551	3	-	80028011	80028011	8553170	3	341,95,50,	0,1394,2490,
#Deleted in new
chr2	80162427	80163135	chr2:80162427-80163135	7	-	80162427	80162427	16724991	1	708,	0,
#Partially deleted in new
chr2	80288350	80304393	chr2:80288350-80304393	0	-	80302250	80303819	789624	3	845,1934,242,	0,13594,15801,
#Deleted in new
chr2	80298180	80304730	chr2:80298180-80304730	2	-	80302250	80303819	789624	3	1510,1934,579,	0,3764,5971,
#Deleted in new
chr2	80301877	80304749	chr2:80301877-80304749	1	-	80302250	80303819	789624	2	2001,598,	0,2274,
#Deleted in new
chr2	80301879	80304274	chr2:80301879-80304274	1	-	80302250	80303819	789624	2	1999,127,	0,2268,
#Deleted in new
chr2	80303150	80304595	chr2:80303150-80304595	0	-	80303150	80303819	789624	3	728,86,65,	0,845,1380,
#Deleted in new
chr2	80303268	80304440	chr2:80303268-80304440	0	-	80303268	80303819	789624	2	610,155,	0,1017,
#Deleted in new
chr2	80303492	80304321	chr2:80303492-80304321	0	-	80303492	80303819	789624	3	386,18,174,	0,503,655,
#Partially deleted in new
chr2	80305104	80648861	chr2:80305104-80648861	1	+	80393258	80647872	789624	12	219,81,153,93,157,201,152,114,182,106,135,1277,	0,88106,114344,239877,240802,250588,269058,276601,284199,298969,303079,342480,
#Partially deleted in new
chr2	80305117	80545986	chr2:80305117-80545986	0	+	80305117	80305117	8553170	5	206,81,153,93,80,	0,88093,114331,239864,240789,
#Partially deleted in new
chr2	80313378	80648861	chr2:80313378-80648861	1	+	80313561	80647872	789624	12	276,81,153,93,157,201,152,114,182,106,135,1277,	0,79832,106070,231603,232528,242314,260784,268327,275925,290695,294805,334206,
#Partially deleted in new
chr2	80313378	80648861	chr2:80313378-80648861	1	+	80419463	80647872	789624	13	276,81,153,93,157,201,152,114,182,106,135,144,1277,	0,79832,106070,231603,232528,242314,260784,268327,275925,290695,294805,305706,334206,
#Partially deleted in new
chr2	80313378	80648861	chr2:80313378-80648861	1	+	80419463	80647872	789624	11	276,81,153,93,157,201,152,114,182,106,1277,	0,79832,106070,231603,232528,242314,260784,268327,275925,290695,334206,
#Partially deleted in new
chr2	80328274	80555728	chr2:80328274-80555728	0	+	80328298	80555728	789624	6	75,81,153,93,157,36,	0,64936,91174,216707,217632,227418,
#Partially deleted in new
chr2	80378686	80546054	chr2:80378686-80546054	0	+	80378686	80378686	8553170	5	95,81,153,93,148,	0,14524,40762,166295,167220,
#Partially deleted in new
chr2	80572680	80605634	chr2:80572680-80605634	0	-	80572680	80572680	8553170	3	657,147,33,	0,32480,32921,
#Partially deleted in new
chr2	80572685	80605634	chr2:80572685-80605634	0	-	80572685	80572685	8553170	2	652,33,	0,32916,
#Partially deleted in new
chr2	80575112	80616538	chr2:80575112-80616538	1	-	80575112	80575112	8553170	3	173,67,119,	0,30489,41307,
#Partially deleted in new
chr2	80575275	80618777	chr2:80575275-80618777	2	-	80575275	80575275	8553170	4	10,67,53,73,	0,30326,37666,43429,
#Partially deleted in new
chr2	80576233	80605634	chr2:80576233-80605634	0	-	80576233	80576233	8553170	3	183,147,33,	0,28927,29368,
#Partially deleted in new
chr2	80576391	80605634	chr2:80576391-80605634	0	-	80576391	80576391	8553170	3	25,99,33,	0,2993,29210,
#Partially deleted in new
chr2	80578896	80605633	chr2:80578896-80605633	0	-	80578896	80578896	8553170	2	587,32,	0,26705,
#Partially deleted in new
chr2	80586268	80605634	chr2:80586268-80605634	0	-	80586268	80586268	8553170	3	255,161,33,	0,17742,19333,
#Partially deleted in new
chr2	80589338	80608489	chr2:80589338-80608489	0	+	80589338	80589338	8553170	3	147,106,306,	0,14735,18845,
#Deleted in new
chr2	80601622	80605634	chr2:80601622-80605634	0	-	80601622	80601622	8553170	3	438,147,33,	0,3538,3979,
#Deleted in new
chr2	80603566	80605634	chr2:80603566-80605634	0	-	80603566	80603566	8553170	2	605,33,	0,2035,
#Deleted in new
chr2	80603712	80605634	chr2:80603712-80605634	0	-	80603712	80603712	8553170	3	459,147,33,	0,1448,1889,
#Partially deleted in new
chr2	80699387	80870190	chr2:80699387-80870190	3	-	80699387	80699387	8553170	5	238,63,94,228,146,	0,4244,77082,81387,170657,
#Deleted in new
chr2	81194336	81201184	chr2:81194336-81201184	7	-	81194336	81194336	16724991	1	6848,	0,
#Deleted in new
chr2	81418722	81419302	chr2:81418722-81419302	7	-	81418722	81418722	16724991	1	580,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	81461357	81466946	chr2:81461357-81466946	0	-	81461357	81461357	789624	3	83,388,373,	0,1096,5216,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	81461361	81467468	chr2:81461361-81467468	3	-	81461361	81461361	8553170	4	79,56,379,895,	0,335,1092,5212,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	81496213	81496327	chr2:81496213-81496327	7	-	81496213	81496213	16724991	1	114,	0,
#Deleted in new
chr2	81666476	81666728	chr2:81666476-81666728	7	-	81666476	81666476	16724991	1	252,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	81967078	81967374	chr2:81967078-81967374	3	+	81967078	81967078	8553170	1	296,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	81983271	82005700	chr2:81983271-82005700	3	-	81983271	81983271	8553170	5	35,47,197,70,139,	0,117,2924,3238,22290,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	82268426	82269927	chr2:82268426-82269927	7	-	82268426	82268426	16724991	1	1501,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	82268611	82268706	chr2:82268611-82268706	3	+	82268611	82268611	8553170	1	95,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	82307066	82307168	chr2:82307066-82307168	3	-	82307066	82307066	8553170	1	102,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	82479127	82538711	chr2:82479127-82538711	3	-	82479127	82479127	8553170	3	181,69,135,	0,42832,59449,
#Deleted in new
chr2	82609651	82609977	chr2:82609651-82609977	7	+	82609651	82609651	16724991	1	326,	0,
#Deleted in new
chr2	82814983	82815516	chr2:82814983-82815516	7	+	82814983	82814983	16724991	1	533,	0,
#Deleted in new
chr2	82815808	82817528	chr2:82815808-82817528	7	+	82815808	82815808	16724991	1	1720,	0,
#Deleted in new
chr2	82817537	82818061	chr2:82817537-82818061	7	-	82817537	82817537	16724991	1	524,	0,
#Deleted in new
chr2	82818130	82819264	chr2:82818130-82819264	7	+	82818130	82818130	16724991	1	1134,	0,
#Deleted in new
chr2	82856825	82857384	chr2:82856825-82857384	7	+	82856825	82856825	16724991	1	559,	0,
#Partially deleted in new
chr2	83218889	83219105	chr2:83218889-83219105	7	-	83218889	83218889	16724991	1	216,	0,
#Deleted in new
chr2	83522813	83523502	chr2:83522813-83523502	3	+	83522813	83522813	5263520	2	58,245,	0,444,
#Deleted in new
chr2	83594955	83595243	chr2:83594955-83595243	7	+	83594955	83594955	16724991	1	288,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	83657734	83657842	chr2:83657734-83657842	3	+	83657734	83657734	8553170	1	108,	0,
#Deleted in new
chr2	84031139	84032358	chr2:84031139-84032358	7	+	84031139	84031139	16724991	1	1219,	0,
#Deleted in new
chr2	84039884	84040720	chr2:84039884-84040720	7	-	84039884	84039884	16724991	1	836,	0,
#Deleted in new
chr2	84290682	84292202	chr2:84290682-84292202	7	+	84290682	84290682	16724991	2	1151,72,	0,1448,
#Deleted in new
chr2	84290776	84291269	chr2:84290776-84291269	5	+	84290776	84290776	16724991	1	493,	0,
#Partially deleted in new
chr2	84315107	84350774	chr2:84315107-84350774	3	+	84315107	84315107	8553170	3	152,76,418,	0,34725,35249,
#Partially deleted in new
chr2	84423522	84459480	chr2:84423522-84459480	3	-	84423745	84459269	0	9	250,189,152,84,58,213,117,104,308,	0,1892,7985,9829,17524,17724,19761,26126,35650,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	84423529	84426936	chr2:84423529-84426936	0	-	84423529	84423529	8553170	2	243,1522,	0,1885,
#Partially deleted in new
chr2	84423559	84432836	chr2:84423559-84432836	0	-	84423559	84423559	8553170	4	213,189,152,519,	0,1855,7948,8758,
#Partially deleted in new
chr2	84425413	84433771	chr2:84425413-84433771	0	-	84425413	84425413	8553170	3	190,152,420,	0,6094,7938,
#Partially deleted in new
chr2	84433206	84441092	chr2:84433206-84441092	0	-	84433206	84433206	8553170	2	229,46,	0,7840,
#Partially deleted in new
chr2	84441059	84459236	chr2:84441059-84459236	0	-	84441059	84441059	8553170	6	45,213,117,104,112,64,	0,187,2224,8589,17393,18113,
#Partially deleted in new
chr2	84441078	84459261	chr2:84441078-84459261	0	-	84443296	84459261	789624	6	26,213,117,19,104,89,	0,168,2205,7850,8570,18094,
#Partially deleted in new
chr2	84441232	84460045	chr2:84441232-84460045	0	-	84441232	84441232	8553170	4	227,117,104,269,	0,2051,8416,18544,
#Partially deleted in new
chr2	84441246	84459246	chr2:84441246-84459246	0	-	84441246	84441246	8553170	4	213,180,104,74,	0,1974,8402,17926,
#Partially deleted in new
chr2	84516454	84819589	chr2:84516454-84819589	3	+	84517826	84819408	789624	77	129,233,174,263,268,135,121,130,169,117,201,121,152,153,252,129,114,144,213,93,120,181,97,220,165,114,126,156,162,138,168,149,108,556,123,183,144,222,148,158,132,172,147,74,155,232,153,141,243,168,236,262,124,197,204,126,165,68,181,180,234,136,170,191,161,89,147,139,120,122,130,128,186,73,152,223,285,	0,1364,9110,12449,27778,30813,31037,31833,33434,36463,41280,57012,60802,63072,67544,72371,77517,79191,87884,89045,90521,95219,100431,103230,104736,104983,107810,108010,108447,118049,120755,123975,125492,136864,138205,141837,142571,152834,153873,155872,160550,164902,168871,170029,171984,177794,181120,183139,184642,186940,187612,189031,190441,191065,192888,193832,196640,199105,201749,206170,211214,216989,228625,246300,265038,268267,269155,270709,279851,281082,289210,291960,295886,296603,297516,299406,302850,
#Partially deleted in new
chr2	84516454	84584854	chr2:84516454-84584854	0	+	84516454	84516454	8553170	11	129,233,174,130,169,117,201,121,152,153,856,	0,1364,9110,31833,33434,36463,41280,57012,60802,63072,67544,
#Partially deleted in new
chr2	84516536	84544329	chr2:84516536-84544329	0	+	84516536	84516536	8553170	4	47,233,174,97,	0,1282,9028,27696,
#Partially deleted in new
chr2	84517818	84819589	chr2:84517818-84819589	1	+	84517826	84819408	789624	76	233,174,263,268,135,121,130,169,117,201,121,152,153,252,129,114,144,213,93,120,181,97,220,165,114,126,156,162,138,168,149,108,556,123,183,144,222,148,158,132,172,147,74,155,232,153,141,243,168,236,262,124,197,204,126,165,68,181,180,234,136,170,191,161,89,147,139,120,122,130,128,186,73,152,223,285,	0,7746,11085,26414,29449,29673,30469,32070,35099,39916,55648,59438,61708,66180,71007,76153,77827,86520,87681,89157,93855,99067,101866,103372,103619,106446,106646,107083,116685,119391,122611,124128,135500,136841,140473,141207,151470,152509,154508,159186,163538,167507,168665,170620,176430,179756,181775,183278,185576,186248,187667,189077,189701,191524,192468,195276,197741,200385,204806,209850,215625,227261,244936,263674,266903,267791,269345,278487,279718,287846,290596,294522,295239,296152,298042,301486,
#Partially deleted in new
chr2	84517822	84584791	chr2:84517822-84584791	0	+	84517822	84517822	8553170	9	229,130,169,117,201,121,152,153,793,	0,30465,32066,35095,39912,55644,59434,61704,66176,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	84658306	84697842	chr2:84658306-84697842	0	+	84658306	84658306	8553170	11	168,144,222,148,158,132,172,74,155,232,268,	0,719,10982,12021,14020,18698,23050,28177,30132,35942,39268,
#Deleted in new
chr2	84750768	84751231	chr2:84750768-84751231	7	+	84750768	84750768	16724991	1	463,	0,
#Deleted in new
chr2	84777258	84778223	chr2:84777258-84778223	7	-	84777258	84777258	16724991	1	965,	0,
#Partially deleted in new
chr2	84821649	84881245	chr2:84821649-84881245	3	-	84821916	84881039	789624	6	451,252,91,175,561,314,	0,2303,10405,17499,48575,59282,
#Partially deleted in new
chr2	84821665	84881245	chr2:84821665-84881245	1	-	84821916	84881039	789624	7	435,252,91,175,147,561,314,	0,2287,10389,17483,20195,48559,59266,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	84821665	84835504	chr2:84821665-84835504	0	-	84821665	84821665	8553170	4	435,252,91,3117,	0,2287,10389,10722,
#Partially deleted in new
chr2	84821941	84842021	chr2:84821941-84842021	0	-	84821941	84821941	8553170	5	159,252,91,175,161,	0,2011,10113,17207,19919,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	84835918	84843984	chr2:84835918-84843984	0	-	84835918	84835918	8553170	4	2323,175,147,415,	0,3230,5942,7651,
#Partially deleted in new
chr2	84837789	84881150	chr2:84837789-84881150	1	-	84838230	84881039	789624	5	452,175,147,561,219,	0,1359,4071,32435,43142,
#Partially deleted in new
chr2	84839066	84849556	chr2:84839066-84849556	0	-	84839066	84839066	8553170	3	257,147,133,	0,2794,10357,
#Deleted in new
chr2	84850710	84851148	chr2:84850710-84851148	7	+	84850710	84850710	16724991	1	438,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	84870328	84881975	chr2:84870328-84881975	0	-	84870328	84870328	8553170	2	457,114,	0,11533,
#Partially deleted in new
chr2	84870588	84907008	chr2:84870588-84907008	0	-	84870588	84870588	8553170	2	197,346,	0,36074,
#Partially deleted in new
chr2	84874695	84875020	chr2:84874695-84875020	7	+	84874695	84874695	16724991	1	325,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	84901642	84907008	chr2:84901642-84907008	0	-	84901642	84901642	8553170	2	236,346,	0,5020,
#Deleted in new
chr2	84905624	84906675	chr2:84905624-84906675	3	+	84906017	84906423	789624	3	94,115,287,	0,378,764,
#Deleted in new
chr2	84915867	84916660	chr2:84915867-84916660	7	+	84915867	84915867	16724991	1	793,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	84971092	85059472	chr2:84971092-85059472	3	+	84971451	85053409	789624	7	375,168,140,102,175,283,6325,	0,56796,63923,72471,75011,78273,82055,
#Partially deleted in new
chr2	84971092	85028056	chr2:84971092-85028056	0	+	85028025	85028056	789624	3	375,118,168,	0,42843,56796,
#Partially deleted in new
chr2	84971963	85035125	chr2:84971963-85035125	0	+	85028025	85035125	789624	3	282,168,110,	0,55925,63052,
#Partially deleted in new
chr2	84972200	85046278	chr2:84972200-85046278	0	+	85028025	85046278	789624	5	40,168,140,102,175,	0,55688,62815,71363,73903,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	85064107	85067347	chr2:85064107-85067347	3	-	85064107	85064107	789624	2	572,2565,	0,675,
#Partially deleted in new
chr2	85068808	85069031	chr2:85068808-85069031	7	-	85068808	85068808	16724991	1	223,	0,
#Partially deleted in new
chr2	85102388	85102694	chr2:85102388-85102694	7	-	85102388	85102388	16724991	1	306,	0,
#Partially deleted in new
chr2	85133409	85310388	chr2:85133409-85310388	3	+	85133684	85309462	789624	12	524,64,128,84,133,103,84,144,160,108,76,1360,	0,606,913,150085,169074,170485,170845,171850,172796,173042,174232,175619,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	85134367	85167373	chr2:85134367-85167373	0	+	85134367	85134367	8553170	2	83,454,	0,32552,
#Deleted in new
chr2	85186408	85187253	chr2:85186408-85187253	3	+	85186408	85186408	789624	2	390,68,	0,777,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	85204925	85205032	chr2:85204925-85205032	3	+	85204925	85204925	8553170	1	107,	0,
#Deleted in new
chr2	85262143	85262267	chr2:85262143-85262267	7	-	85262143	85262143	16724991	1	124,	0,
#Deleted in new
chr2	85303392	85304364	chr2:85303392-85304364	0	+	85303392	85303392	8553170	2	605,110,	0,862,
#Deleted in new
chr2	85315040	85316529	chr2:85315040-85316529	7	+	85315040	85315040	16724991	5	169,130,223,49,133,	0,384,586,954,1356,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	85318019	85328296	chr2:85318019-85328296	1	-	85322664	85327962	789624	5	4723,54,84,1178,380,	0,4726,6895,8488,9897,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	85318023	85328425	chr2:85318023-85328425	3	-	85322735	85327962	789624	4	4718,84,1178,509,	0,6891,8484,9893,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	85318026	85328251	chr2:85318026-85328251	1	-	85322735	85327962	789624	5	4715,84,297,707,335,	0,6888,8481,8952,9890,
#Partially deleted in new
chr2	85321893	85328024	chr2:85321893-85328024	1	-	85322742	85327962	8553170	4	906,84,1178,108,	0,3021,4614,6023,
#Partially deleted in new
chr2	85321893	85328024	chr2:85321893-85328024	1	-	85322704	85327962	789624	4	865,84,1178,108,	0,3021,4614,6023,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	85324384	85327985	chr2:85324384-85327985	1	-	85324878	85327962	789624	3	614,1178,69,	0,2123,3532,
#Deleted in new
chr2	85332894	85332996	chr2:85332894-85332996	3	-	85332894	85332894	8553170	1	102,	0,
#Deleted in new
chr2	85341280	85341838	chr2:85341280-85341838	7	-	85341280	85341280	16724991	1	558,	0,
#Partially deleted in new
chr2	85342087	85354620	chr2:85342087-85354620	3	-	85343241	85354507	789624	11	1294,160,167,110,139,120,198,202,242,183,285,	0,1551,1911,2151,2506,3887,7296,7952,8692,9592,12248,
#Partially deleted in new
chr2	85342087	85350891	chr2:85342087-85350891	0	-	85343718	85350891	789624	8	1294,160,110,139,120,198,202,112,	0,1551,2151,2506,3887,7296,7952,8692,
#Partially deleted in new
chr2	85342681	85354500	chr2:85342681-85354500	0	-	85343241	85354500	789624	8	700,160,167,110,139,120,198,165,	0,957,1317,1557,1912,3293,6702,11654,
#Partially deleted in new
chr2	85342970	85349481	chr2:85342970-85349481	0	-	85345771	85349481	789624	6	411,160,110,139,582,98,	0,668,1268,1623,2542,6413,
#Partially deleted in new
chr2	85349431	85354506	chr2:85349431-85354506	0	-	85349431	85354506	789624	4	150,202,242,171,	0,608,1348,4904,
#Deleted in new
chr2	85349877	85351016	chr2:85349877-85351016	0	-	85349877	85349877	8553170	2	364,237,	0,902,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	85351398	85354531	chr2:85351398-85354531	0	-	85351398	85351398	8553170	2	464,196,	0,2937,
#Partially deleted in new
chr2	85354393	85357025	chr2:85354393-85357025	0	+	85354393	85354393	8553170	3	436,95,59,	0,682,2573,
#Partially deleted in new
chr2	85354719	85391748	chr2:85354719-85391748	3	+	85357198	85390962	789624	14	110,95,44,286,75,70,69,92,124,123,131,77,128,989,	0,356,835,2247,7466,8377,13966,15019,16366,16720,22624,35031,35418,36040,
#Partially deleted in new
chr2	85354719	85371563	chr2:85354719-85371563	0	+	85357198	85371563	789624	9	110,44,286,75,70,69,92,124,124,	0,835,2247,7466,8377,13966,15019,16366,16720,
#Partially deleted in new
chr2	85354725	85391752	chr2:85354725-85391752	0	+	85354725	85354725	8553170	12	104,162,75,70,69,92,124,123,131,77,128,993,	0,829,7460,8371,13960,15013,16360,16714,22618,35025,35412,36034,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	85354745	85391748	chr2:85354745-85391748	0	+	85357198	85387124	789624	12	84,2177,75,70,69,92,124,123,131,128,77,1611,	0,330,7440,8351,13940,14993,16340,16694,22598,32352,35005,35392,
#Partially deleted in new
chr2	85354750	85391752	chr2:85354750-85391752	0	+	85357198	85387102	789624	12	79,95,286,75,70,69,92,124,128,77,128,993,	0,325,2216,7435,8346,13935,14988,16335,32347,35000,35387,36009,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	85354752	85391748	chr2:85354752-85391748	1	+	85357198	85390962	789624	15	77,95,162,66,286,75,70,69,92,124,123,131,77,128,989,	0,323,802,1849,2214,7433,8344,13933,14986,16333,16687,22591,34998,35385,36007,
#Partially deleted in new
chr2	85354756	85391748	chr2:85354756-85391748	1	+	85357198	85390962	789624	13	73,95,286,75,70,69,92,124,123,131,77,128,989,	0,319,2210,7429,8340,13929,14982,16329,16683,22587,34994,35381,36003,
#Partially deleted in new
chr2	85354768	85387199	chr2:85354768-85387199	0	+	85357198	85377345	789624	7	61,162,286,75,124,131,102,	0,786,2198,7417,16317,22575,32329,
#Partially deleted in new
chr2	85354768	85368740	chr2:85354768-85368740	0	+	85354768	85354768	8553170	5	61,44,286,75,55,	0,786,2198,7417,13917,
#Partially deleted in new
chr2	85354778	85357578	chr2:85354778-85357578	0	+	85354778	85354778	8553170	4	51,95,162,612,	0,297,776,2188,
#Partially deleted in new
chr2	85354802	85391748	chr2:85354802-85391748	1	+	85357198	85390498	789624	11	27,286,75,70,69,92,124,123,131,77,1611,	0,2164,7383,8294,13883,14936,16283,16637,22541,34948,35335,
#Partially deleted in new
chr2	85354805	85371104	chr2:85354805-85371104	0	+	85357198	85371104	789624	8	24,342,286,75,70,69,92,19,	0,749,2161,7380,8291,13880,14933,16280,
#Partially deleted in new
chr2	85355074	85391750	chr2:85355074-85391750	1	+	85357198	85390962	789624	13	96,230,286,75,70,69,92,124,123,131,77,128,991,	0,480,1892,7111,8022,13611,14664,16011,16365,22269,34676,35063,35685,
#Partially deleted in new
chr2	85355916	85369830	chr2:85355916-85369830	0	+	85357198	85369830	789624	6	617,286,75,70,69,92,	0,1050,6269,7180,12769,13822,
#Partially deleted in new
chr2	85357079	85391752	chr2:85357079-85391752	0	+	85357198	85377345	789624	10	173,75,70,69,92,124,131,77,128,993,	0,5106,6017,11606,12659,14006,20264,32671,33058,33680,
#Partially deleted in new
chr2	85357190	85390970	chr2:85357190-85390970	0	+	85357198	85371283	789624	10	62,75,70,69,92,477,131,77,128,211,	0,4995,5906,11495,12548,13895,20153,32560,32947,33569,
#Partially deleted in new
chr2	85357190	85391094	chr2:85357190-85391094	0	+	85357198	85387124	789624	12	62,75,70,69,92,124,123,131,128,77,128,335,	0,4995,5906,11495,12548,13895,14249,20153,29907,32560,32947,33569,
#Partially deleted in new
chr2	85357197	85371353	chr2:85357197-85371353	0	+	85357198	85368691	789624	5	55,75,69,92,268,	0,4988,11488,12541,13888,
#Partially deleted in new
chr2	85360797	85360925	chr2:85360797-85360925	7	-	85360797	85360797	16724991	1	128,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	85362232	85372909	chr2:85362232-85372909	0	+	85362232	85362232	8553170	5	28,70,69,92,1824,	0,864,6453,7506,8853,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	85367584	85367686	chr2:85367584-85367686	3	+	85367584	85367584	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	85368281	85368580	chr2:85368281-85368580	3	+	85368281	85368281	8553170	1	299,	0,
#Partially deleted in new
chr2	85376881	85390995	chr2:85376881-85390995	0	+	85376881	85376881	8553170	5	35,131,77,128,236,	0,462,12869,13256,13878,
#Deleted in new
chr2	85387073	85387146	chr2:85387073-85387146	3	-	85387073	85387073	8553170	1	73,	0,
#Deleted in new
chr2	85389547	85390654	chr2:85389547-85390654	0	+	85389547	85389547	8553170	2	280,517,	0,590,
#Partially deleted in new
chr2	85394747	85410553	chr2:85394747-85410553	1	-	85394892	85402145	0	10	211,89,133,93,150,165,155,173,36,237,	0,790,3272,3942,4388,6417,6781,7037,7375,15569,
#Partially deleted in new
chr2	85394752	85398734	chr2:85394752-85398734	0	-	85394892	85398734	789624	4	206,89,112,45,	0,785,3267,3937,
#Partially deleted in new
chr2	85394766	85410370	chr2:85394766-85410370	1	-	85394892	85402145	0	10	192,89,133,93,105,165,155,173,36,54,	0,771,3253,3923,4414,6398,6762,7018,7356,15550,
#Partially deleted in new
chr2	85394827	85414042	chr2:85394827-85414042	3	-	85394892	85402145	0	10	131,89,133,93,150,165,155,173,28,66,	0,710,3192,3862,4308,6337,6701,6957,7295,19149,
#Partially deleted in new
chr2	85394892	85414074	chr2:85394892-85414074	1	-	85394892	85402145	0	10	66,89,133,93,150,165,155,173,36,91,	0,645,3127,3797,4243,6272,6636,6892,7230,19091,
#Partially deleted in new
chr2	85394894	85398352	chr2:85394894-85398352	0	-	85394894	85394894	8553170	3	64,89,333,	0,643,3125,
#Partially deleted in new
chr2	85395574	85401671	chr2:85395574-85401671	0	-	85395574	85395574	8553170	7	52,31,133,93,150,165,143,	0,405,2445,3115,3561,5590,5954,
#Partially deleted in new
chr2	85398689	85408815	chr2:85398689-85408815	0	-	85398689	85402145	789624	7	93,150,165,155,173,36,93,	0,446,2475,2839,3095,3433,10033,
#Partially deleted in new
chr2	85398689	85414039	chr2:85398689-85414039	0	-	85398689	85402145	789624	8	93,150,165,155,173,36,102,56,	0,446,2475,2839,3095,3433,14453,15294,
#Partially deleted in new
chr2	85398689	85409832	chr2:85398689-85409832	0	-	85398689	85402145	789624	7	93,150,165,155,173,36,67,	0,446,2475,2839,3095,3433,11076,
#Partially deleted in new
chr2	85398719	85410352	chr2:85398719-85410352	0	-	85398719	85398719	8553170	6	63,150,165,155,374,36,	0,416,2445,2809,3065,11597,
#Partially deleted in new
chr2	85399145	85418432	chr2:85399145-85418432	0	-	85399145	85402145	789624	6	140,165,155,173,36,166,	0,2019,2383,2639,2977,19121,
#Partially deleted in new
chr2	85401171	85413213	chr2:85401171-85413213	0	-	85401171	85401171	8553170	6	158,60,33,173,36,71,	0,357,479,613,951,11971,
#Partially deleted in new
chr2	85401644	85414018	chr2:85401644-85414018	0	-	85401644	85401644	8553170	2	514,35,	0,12339,
#Partially deleted in new
chr2	85402137	85413974	chr2:85402137-85413974	0	-	85402137	85402137	8553170	3	21,102,142,	0,11005,11695,
#Partially deleted in new
chr2	85418720	85422692	chr2:85418720-85422692	0	+	85418720	85418720	8553170	5	210,216,112,61,97,	0,308,3482,3709,3875,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	85420854	85430040	chr2:85420854-85430040	0	+	85420854	85420854	8553170	8	33,112,61,95,100,97,26,60,	0,1348,1575,1741,4453,8517,8732,9126,
#Deleted in new
chr2	85421399	85422470	chr2:85421399-85422470	0	+	85421399	85421399	8553170	2	522,34,	0,1037,
#Partially deleted in new
chr2	85429575	85436885	chr2:85429575-85436885	0	+	85429575	85429575	8553170	11	440,71,115,59,23,61,56,228,159,129,75,	0,788,962,1634,3523,3995,5492,5693,6090,6890,7235,
#Partially deleted in new
chr2	85430381	85436921	chr2:85430381-85436921	0	+	85430381	85430381	8553170	13	53,115,59,61,23,61,79,31,59,84,151,129,85,	0,156,828,1517,2717,3189,3651,3958,4683,5031,5284,6084,6455,
#Partially deleted in new
chr2	85434065	85437027	chr2:85434065-85437027	0	+	85434065	85434065	8553170	7	46,31,59,84,159,129,191,	0,274,999,1347,1600,2400,2771,
#Deleted in new
chr2	85434794	85437029	chr2:85434794-85437029	0	+	85434794	85434794	8553170	5	329,84,159,129,193,	0,618,871,1671,2042,
#Deleted in new
chr2	85435419	85436738	chr2:85435419-85436738	0	+	85435419	85435419	8553170	3	77,159,273,	0,246,1046,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	85442494	85442791	chr2:85442494-85442791	3	+	85442494	85442494	8553170	1	297,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	85460143	85460252	chr2:85460143-85460252	3	-	85460143	85460143	8553170	1	109,	0,
#Partially deleted in new
chr2	85490929	85491780	chr2:85490929-85491780	7	-	85490929	85490929	16724991	1	851,	0,
#Partially deleted in new
chr2	85539164	85545280	chr2:85539164-85545280	3	+	85539287	85543772	0	9	214,78,123,113,144,219,183,134,1611,	0,1918,2090,2468,2664,2990,3400,3736,4505,
#Partially deleted in new
chr2	85539167	85541454	chr2:85539167-85541454	0	+	85539167	85539167	8553170	2	211,372,	0,1915,
#Partially deleted in new
chr2	85539167	85541656	chr2:85539167-85541656	0	+	85539167	85539167	8553170	3	211,78,402,	0,1915,2087,
#Partially deleted in new
chr2	85539603	85543218	chr2:85539603-85543218	0	+	85539603	85539603	8553170	7	69,78,123,113,144,593,318,	0,1479,1651,2029,2225,2551,3297,
#Partially deleted in new
chr2	85539641	85543608	chr2:85539641-85543608	1	+	85541274	85543038	0	8	359,78,123,113,144,219,183,708,	0,1441,1613,1991,2187,2513,2923,3259,
#Partially deleted in new
chr2	85541481	85542129	chr2:85541481-85542129	0	+	85541481	85541481	8553170	2	264,301,	0,347,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	85544722	85561509	chr2:85544722-85561509	3	-	85549933	85561428	789624	15	5404,196,148,131,170,152,132,266,164,107,79,166,159,171,124,	0,5832,6202,6757,7089,7693,8216,8509,9420,10761,11459,13717,14194,16092,16663,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	85547619	85561493	chr2:85547619-85561493	0	-	85547619	85547619	8553170	3	385,70,108,	0,11386,13766,
#Partially deleted in new
chr2	85549829	85561532	chr2:85549829-85561532	1	-	85549933	85561428	789624	14	297,196,148,131,170,152,132,266,164,107,79,166,159,147,	0,725,1095,1650,1982,2586,3109,3402,4313,5654,6352,8610,9087,11556,
#Partially deleted in new
chr2	85552478	85554524	chr2:85552478-85554524	0	-	85552478	85552478	8553170	4	89,132,266,382,	0,460,753,1664,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	85552922	85553803	chr2:85552922-85553803	0	-	85552922	85552922	8553170	2	148,572,	0,309,
#Partially deleted in new
chr2	85554843	85561473	chr2:85554843-85561473	0	-	85558634	85561428	789624	6	747,79,124,130,171,88,	0,1338,3695,4102,5971,6542,
#Partially deleted in new
chr2	85556181	85561493	chr2:85556181-85561493	0	-	85558634	85561428	789624	4	79,223,130,108,	0,2258,2764,5204,
#Partially deleted in new
chr2	85556217	85561493	chr2:85556217-85561493	0	-	85558642	85561428	789624	4	43,223,159,108,	0,2222,2699,5168,
#Partially deleted in new
chr2	85558583	85561493	chr2:85558583-85561493	0	-	85558583	85558583	8553170	2	492,108,	0,2802,
#Partially deleted in new
chr2	85558724	85561547	chr2:85558724-85561547	0	-	85558724	85558724	8553170	3	351,171,162,	0,2090,2661,
#Partially deleted in new
chr2	85561561	85581997	chr2:85561561-85581997	1	+	85579083	85581716	789624	3	83,159,422,	0,17447,20014,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	85567661	85567960	chr2:85567661-85567960	3	-	85567661	85567661	8553170	1	299,	0,
#Partially deleted in new
chr2	85577490	85582031	chr2:85577490-85582031	3	+	85577646	85581716	0	3	159,159,456,	0,1518,4085,
#Partially deleted in new
chr2	85577592	85582031	chr2:85577592-85582031	1	+	85577646	85581580	789624	4	57,159,133,456,	0,1416,2149,3983,
#Partially deleted in new
chr2	85584407	85593412	chr2:85584407-85593412	3	+	85584490	85593157	789624	3	86,138,465,	0,7317,8540,
#Partially deleted in new
chr2	85591596	85593243	chr2:85591596-85593243	0	+	85591596	85591596	8553170	2	268,296,	0,1351,
#Deleted in new
chr2	85595724	85597581	chr2:85595724-85597581	1	+	85595763	85597196	789624	4	125,131,110,478,	0,794,1097,1379,
#Deleted in new
chr2	85595724	85597016	chr2:85595724-85597016	0	+	85595724	85595724	8553170	2	125,498,	0,794,
#Deleted in new
chr2	85595733	85597581	chr2:85595733-85597581	3	+	85595763	85597504	789624	5	116,131,110,75,137,	0,785,1088,1370,1711,
#Deleted in new
chr2	85595747	85596820	chr2:85595747-85596820	0	+	85595763	85596820	789624	3	102,131,94,	0,771,979,
#Deleted in new
chr2	85595755	85597604	chr2:85595755-85597604	0	+	85595763	85596876	789624	5	94,131,75,75,160,	0,763,1101,1348,1689,
#Deleted in new
chr2	85595816	85597613	chr2:85595816-85597613	0	+	85595816	85597565	789624	4	33,131,226,169,	0,702,1136,1628,
#Deleted in new
chr2	85598547	85602698	chr2:85598547-85602698	1	-	85599075	85601456	789624	7	770,178,128,87,48,181,92,	0,977,1343,2473,2887,3336,4059,
#Deleted in new
chr2	85598548	85602669	chr2:85598548-85602669	0	-	85598548	85598548	8553170	5	769,178,128,462,786,	0,976,1342,2472,3335,
#Deleted in new
chr2	85598561	85602678	chr2:85598561-85602678	3	-	85599075	85601948	789624	8	756,178,128,68,87,48,181,72,	0,963,1329,1783,2459,2873,3322,4045,
#Deleted in new
chr2	85598577	85602659	chr2:85598577-85602659	0	-	85598577	85598577	8553170	7	740,178,128,68,462,181,53,	0,947,1313,1767,2443,3306,4029,
#Deleted in new
chr2	85598583	85602416	chr2:85598583-85602416	1	-	85599075	85601948	789624	7	734,178,128,68,87,48,533,	0,941,1307,1761,2437,2851,3300,
#Deleted in new
chr2	85598652	85599990	chr2:85598652-85599990	0	-	85598652	85598652	8553170	2	676,100,	0,1238,
#Deleted in new
chr2	85599084	85601482	chr2:85599084-85601482	0	-	85601318	85601456	789624	5	233,178,128,87,177,	0,440,806,1936,2221,
#Deleted in new
chr2	85599591	85601765	chr2:85599591-85601765	0	-	85601318	85601456	789624	6	111,128,68,87,177,208,	0,299,753,1429,1714,1966,
#Deleted in new
chr2	85599617	85602665	chr2:85599617-85602665	0	-	85599617	85599617	8553170	5	85,128,462,181,59,	0,273,1403,2266,2989,
#Deleted in new
chr2	85599926	85601758	chr2:85599926-85601758	0	-	85599926	85601456	789624	4	92,87,48,201,	0,1094,1508,1631,
#Deleted in new
chr2	85600344	85602654	chr2:85600344-85602654	0	-	85601367	85601948	789624	6	68,260,87,177,181,48,	0,155,676,961,1539,2262,
#Deleted in new
chr2	85601260	85603196	chr2:85601260-85603196	0	-	85601260	85601260	8553170	3	222,181,194,	0,623,1742,
#Partially deleted in new
chr2	85602855	85649280	chr2:85602855-85649280	0	+	85602855	85602855	789624	13	226,70,95,157,153,226,78,68,189,143,136,87,520,	0,16364,18629,20770,22683,27865,33197,34513,36347,38120,42092,45074,45905,
#Partially deleted in new
chr2	85602855	85623782	chr2:85602855-85623782	0	+	85602855	85602855	8553170	5	226,70,120,95,137,	0,16364,18351,18629,20790,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	85606653	85612029	chr2:85606653-85612029	3	-	85608944	85611984	789624	4	2414,152,119,152,	0,2781,5014,5224,
#Partially deleted in new
chr2	85608283	85611935	chr2:85608283-85611935	0	-	85611807	85611935	789624	3	784,152,268,	0,1151,3384,
#Partially deleted in new
chr2	85608566	85612066	chr2:85608566-85612066	0	-	85611807	85611984	789624	3	501,152,323,	0,868,3177,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	85610219	85612032	chr2:85610219-85612032	1	-	85611509	85611984	789624	2	1567,155,	0,1658,
#Deleted in new
chr2	85611242	85611741	chr2:85611242-85611741	0	-	85611242	85611242	8553170	2	331,74,	0,425,
#Partially deleted in new
chr2	85611377	85621504	chr2:85611377-85621504	0	+	85611377	85611377	8553170	3	203,70,20,	0,7842,10107,
#Partially deleted in new
chr2	85612102	85625589	chr2:85612102-85625589	0	+	85612325	85625589	789624	5	257,70,95,137,51,	0,7117,9382,11543,13436,
#Partially deleted in new
chr2	85612102	85649282	chr2:85612102-85649282	1	+	85612325	85648808	0	12	257,70,157,153,226,78,68,189,143,136,87,522,	0,7117,11523,13436,18618,23950,25266,27100,28873,32845,35827,36658,
#Partially deleted in new
chr2	85612102	85649282	chr2:85612102-85649282	1	+	85612325	85648808	789624	13	257,70,95,137,153,226,78,68,189,143,136,87,522,	0,7117,9382,11543,13436,18618,23950,25266,27100,28873,32845,35827,36658,
#Partially deleted in new
chr2	85612104	85625617	chr2:85612104-85625617	0	+	85612325	85625617	789624	4	255,70,157,79,	0,7115,11521,13434,
#Partially deleted in new
chr2	85612121	85623790	chr2:85612121-85623790	0	+	85612121	85612121	8553170	4	238,70,95,165,	0,7098,9363,11504,
#Partially deleted in new
chr2	85616142	85649253	chr2:85616142-85649253	1	+	85616195	85648808	789624	13	321,70,95,137,153,226,78,68,189,143,136,93,237,	0,3077,5342,7503,9396,14578,19910,21226,23060,24833,28805,32618,32874,
#Partially deleted in new
chr2	85616151	85623778	chr2:85616151-85623778	0	+	85616151	85616151	8553170	4	305,70,95,153,	0,3068,5333,7474,
#Partially deleted in new
chr2	85616168	85649280	chr2:85616168-85649280	3	+	85616195	85648808	0	14	295,70,95,137,153,226,78,68,189,143,136,87,93,264,	0,3051,5316,7477,9370,14552,19884,21200,23034,24807,28779,31761,32592,32848,
#Partially deleted in new
chr2	85616185	85649277	chr2:85616185-85649277	1	+	85616195	85648808	0	13	278,70,95,137,153,226,78,68,189,143,136,87,517,	0,3034,5299,7460,9353,14535,19867,21183,23017,24790,28762,31744,32575,
#Partially deleted in new
chr2	85616186	85625690	chr2:85616186-85625690	0	+	85616195	85623657	789624	5	277,70,95,157,152,	0,3033,5298,7439,9352,
#Partially deleted in new
chr2	85616193	85649277	chr2:85616193-85649277	1	+	85616195	85647969	0	12	270,70,95,137,153,226,78,68,189,143,87,517,	0,3026,5291,7452,9345,14527,19859,21175,23009,24782,31736,32567,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	85616289	85645274	chr2:85616289-85645274	0	+	85616289	85616289	8553170	11	174,70,95,137,153,226,78,68,189,143,327,	0,2930,5195,7356,9249,14431,19763,21079,22913,24686,28658,
#Partially deleted in new
chr2	85625538	85639241	chr2:85625538-85639241	0	+	85625538	85636085	789624	4	153,78,68,39,	0,10514,11830,13664,
#Partially deleted in new
chr2	85636085	85649207	chr2:85636085-85649207	0	+	85636085	85636085	8553170	6	45,68,189,143,136,447,	0,1283,3117,4890,8862,12675,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	85639292	85639822	chr2:85639292-85639822	0	+	85639292	85639292	8553170	2	99,348,	0,182,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	85641054	85646167	chr2:85641054-85646167	0	+	85641054	85641054	8553170	3	64,136,354,	0,3893,4759,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	85644947	85649111	chr2:85644947-85649111	0	+	85644947	85644947	8553170	4	136,86,87,351,	0,866,2982,3813,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	85657313	85668203	chr2:85657313-85668203	1	-	85661472	85668183	0	11	2369,82,81,146,184,90,189,126,72,128,87,	0,4140,4715,6032,6350,7975,8292,9303,9792,10365,10803,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	85657317	85668741	chr2:85657317-85668741	1	-	85661472	85668183	0	12	2365,82,81,146,184,90,189,126,72,128,135,68,	0,4136,4711,6028,6346,7971,8288,9299,9788,10361,10799,11356,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	85658254	85668172	chr2:85658254-85668172	0	-	85661472	85668172	789624	11	601,82,81,134,184,90,189,126,72,128,56,	0,3199,3774,5091,5409,7034,7351,8362,8851,9424,9862,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	85658289	85668741	chr2:85658289-85668741	3	-	85661472	85668219	789624	12	566,82,81,146,184,90,189,126,72,128,135,68,	0,3164,3739,5056,5374,6999,7316,8327,8816,9389,9827,10384,
#Partially deleted in new
chr2	85661217	85663478	chr2:85661217-85663478	0	-	85661472	85663478	789624	3	318,81,133,	0,811,2128,
#Partially deleted in new
chr2	85662213	85663547	chr2:85662213-85663547	0	-	85662213	85662213	8553170	2	66,202,	0,1132,
#Deleted in new
chr2	85666534	85668189	chr2:85666534-85668189	0	-	85666534	85666534	8553170	4	208,72,128,73,	0,571,1144,1582,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	85685174	85696730	chr2:85685174-85696730	0	+	85685174	85685174	8553170	3	47,104,773,	0,10145,10783,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	85686052	85687047	chr2:85686052-85687047	7	-	85686052	85686052	16724991	1	995,	0,
#Partially deleted in new
chr2	85694290	85698854	chr2:85694290-85698854	3	+	85694418	85698574	0	5	180,104,99,172,291,	0,1029,1667,3215,4273,
#Deleted in new
chr2	85694292	85696391	chr2:85694292-85696391	0	+	85694292	85694292	8553170	4	178,244,104,434,	0,460,1027,1665,
#Deleted in new
chr2	85694301	85696435	chr2:85694301-85696435	0	+	85694301	85694301	8553170	3	169,104,478,	0,1018,1656,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	85694327	85696494	chr2:85694327-85696494	0	+	85694327	85694327	8553170	4	143,171,104,537,	0,425,992,1630,
#Deleted in new
chr2	85694331	85696106	chr2:85694331-85696106	0	+	85694331	85694331	8553170	3	139,671,149,	0,421,1626,
#Partially deleted in new
chr2	85694341	85698747	chr2:85694341-85698747	0	+	85694341	85694341	8553170	4	1082,99,690,184,	0,1616,2646,4222,
#Partially deleted in new
chr2	85694357	85698744	chr2:85694357-85698744	1	+	85694418	85698574	789624	6	113,81,104,99,172,181,	0,558,962,1600,3148,4206,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	85694379	85696797	chr2:85694379-85696797	0	+	85694379	85694379	8553170	5	91,244,104,99,233,	0,373,940,1578,2185,
#Partially deleted in new
chr2	85694425	85698757	chr2:85694425-85698757	1	+	85694989	85698574	0	6	45,244,104,99,172,194,	0,327,894,1532,3080,4138,
#Partially deleted in new
chr2	85694425	85697101	chr2:85694425-85697101	0	+	85694425	85694425	8553170	5	45,171,104,99,114,	0,327,894,1532,2562,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	85694903	85696532	chr2:85694903-85696532	0	+	85694903	85694903	8553170	3	283,104,575,	0,416,1054,
#Deleted in new
chr2	85695136	85696393	chr2:85695136-85696393	0	+	85695136	85695136	8553170	2	287,436,	0,821,
#Partially deleted in new
chr2	85695367	85698747	chr2:85695367-85698747	0	+	85695367	85698747	789624	5	56,99,172,50,184,	0,590,2138,3030,3196,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	85728193	85728337	chr2:85728193-85728337	3	-	85728193	85728193	8553170	1	144,	0,
#Partially deleted in new
chr2	85751343	85788066	chr2:85751343-85788066	0	+	85751343	85751343	8553170	3	519,192,1182,	0,12647,35541,
#Partially deleted in new
chr2	85753893	85788066	chr2:85753893-85788066	3	+	85754189	85786890	789624	3	1064,192,1182,	0,10097,32991,
#Partially deleted in new
chr2	85754646	85775213	chr2:85754646-85775213	0	+	85754646	85754646	8553170	3	311,192,2596,	0,9344,17971,
#Partially deleted in new
chr2	85760748	85781167	chr2:85760748-85781167	0	+	85760748	85760748	8553170	4	154,192,166,203,	0,3242,19624,20216,
#Partially deleted in new
chr2	85781033	85788039	chr2:85781033-85788039	0	+	85781033	85781033	8553170	2	133,1155,	0,5851,
#Deleted in new
chr2	85783599	85783677	chr2:85783599-85783677	3	-	85783599	85783599	5263520	1	78,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	85815129	85825391	chr2:85815129-85825391	3	+	85815129	85815129	789624	3	226,89,1396,	0,3178,8866,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	85820434	85820612	chr2:85820434-85820612	3	-	85820434	85820434	8553170	1	178,	0,
#Partially deleted in new
chr2	85837119	85889055	chr2:85837119-85889055	3	-	85840143	85888905	789624	7	3273,159,187,344,112,124,232,	0,7276,9257,10741,24061,26242,51704,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	85837627	85850929	chr2:85837627-85850929	0	-	85837627	85837627	8553170	4	2765,159,187,3069,	0,6768,8749,10233,
#Partially deleted in new
chr2	85839148	85887580	chr2:85839148-85887580	1	-	85840143	85863483	789624	7	1244,159,187,344,112,124,174,	0,5247,7228,8712,22032,24213,48258,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	85839148	85867670	chr2:85839148-85867670	1	-	85840143	85867617	789624	7	1244,159,187,344,112,124,66,	0,5247,7228,8712,22032,24213,28456,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	85839148	85849576	chr2:85839148-85849576	0	-	85839148	85839148	8553170	5	1244,159,187,181,1716,	0,5247,7228,8233,8712,
#Partially deleted in new
chr2	85839148	85861231	chr2:85839148-85861231	0	-	85852901	85861231	789624	6	1244,187,344,440,141,51,	0,7228,8712,12115,13711,22032,
#Partially deleted in new
chr2	85839149	85902543	chr2:85839149-85902543	1	-	85840143	85863483	789624	8	1243,159,187,344,112,124,121,78,	0,5246,7227,8711,22031,24212,54658,63316,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	85839150	85855525	chr2:85839150-85855525	0	-	85839150	85839150	8553170	5	1242,159,187,344,2666,	0,5245,7226,8710,13709,
#Partially deleted in new
chr2	85839168	85888958	chr2:85839168-85888958	1	-	85840143	85888905	789624	7	1224,159,187,224,112,124,135,	0,5227,7208,8692,22012,24193,49655,
#Partially deleted in new
chr2	85839168	85888904	chr2:85839168-85888904	0	-	85870196	85888904	789624	8	1224,159,187,224,112,124,187,81,	0,5227,7208,8692,22012,24193,30903,49655,
#Partially deleted in new
chr2	85839168	85888963	chr2:85839168-85888963	1	-	85840143	85888905	789624	6	1224,187,344,112,124,140,	0,7208,8692,22012,24193,49655,
#Partially deleted in new
chr2	85839168	85888906	chr2:85839168-85888906	0	-	85858241	85888905	789624	8	1224,159,187,344,114,112,124,83,	0,5227,7208,8692,18965,22012,24193,49655,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	85839177	85861217	chr2:85839177-85861217	0	-	85850687	85861217	789624	5	1215,187,181,2974,37,	0,7199,8204,8683,22003,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	85839187	85905199	chr2:85839187-85905199	1	-	85840143	85905002	789624	8	1205,159,187,344,112,124,121,215,	0,5208,7189,8673,21993,24174,54620,65797,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	85839188	85846253	chr2:85839188-85846253	0	-	85839188	85839188	8553170	2	1204,1858,	0,5207,
#Partially deleted in new
chr2	85839188	85888881	chr2:85839188-85888881	0	-	85846390	85888881	789624	6	1204,48,344,112,124,58,	0,7188,8672,21992,24173,49635,
#Partially deleted in new
chr2	85839193	85889000	chr2:85839193-85889000	0	-	85870196	85888905	789624	8	1199,159,187,344,112,124,187,177,	0,5202,7183,8667,21987,24168,30878,49630,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	85839193	85856448	chr2:85839193-85856448	0	-	85839193	85839193	8553170	6	1199,159,187,344,440,3589,	0,5202,7183,8667,12070,13666,
#Partially deleted in new
chr2	85839195	85863464	chr2:85839195-85863464	0	-	85848360	85863464	789624	6	1197,159,48,521,112,103,	0,5200,7181,8665,21985,24166,
#Partially deleted in new
chr2	85839195	85888958	chr2:85839195-85888958	0	-	85870196	85888905	789624	8	1197,159,187,521,112,124,187,135,	0,5200,7181,8665,21985,24166,30876,49628,
#Partially deleted in new
chr2	85839195	85888958	chr2:85839195-85888958	0	-	85847960	85888905	789624	6	1197,187,181,344,124,135,	0,7181,8186,8665,24166,49628,
#Partially deleted in new
chr2	85839195	85888903	chr2:85839195-85888903	0	-	85846390	85888903	789624	7	1197,159,48,344,112,124,80,	0,5200,7181,8665,21985,24166,49628,
#Partially deleted in new
chr2	85839195	85888939	chr2:85839195-85888939	0	-	85848360	85888905	789624	8	1197,159,187,181,521,112,124,116,	0,5200,7181,8186,8665,21985,24166,49628,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	85839195	85850934	chr2:85839195-85850934	0	-	85839195	85839195	8553170	4	1197,159,48,3074,	0,5200,7181,8665,
#Partially deleted in new
chr2	85839195	85888747	chr2:85839195-85888747	0	-	85852901	85863483	789624	9	1197,159,187,344,440,141,112,124,140,	0,5200,7181,8665,12068,13664,21985,24166,49412,
#Partially deleted in new
chr2	85839195	85888401	chr2:85839195-85888401	1	-	85840143	85863483	789624	7	1197,159,187,344,112,124,174,	0,5200,7181,8665,21985,24166,49032,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	85839195	85888959	chr2:85839195-85888959	0	-	85870196	85888905	789624	9	1197,159,187,521,112,124,214,187,136,	0,5200,7181,8665,21985,24166,28649,30876,49628,
#Partially deleted in new
chr2	85839195	85888967	chr2:85839195-85888967	0	-	85852901	85888905	789624	9	1197,159,187,344,440,141,112,124,144,	0,5200,7181,8665,12068,13664,21985,24166,49628,
#Partially deleted in new
chr2	85839195	85888905	chr2:85839195-85888905	0	-	85870196	85888905	789624	7	1197,187,521,112,124,187,82,	0,7181,8665,21985,24166,30876,49628,
#Partially deleted in new
chr2	85839195	85888888	chr2:85839195-85888888	0	-	85847465	85888888	789624	8	1197,159,187,181,344,112,124,65,	0,5200,7181,8186,8665,21985,24166,49628,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	85839195	85850198	chr2:85839195-85850198	0	-	85839195	85839195	8553170	3	1197,187,2338,	0,7181,8665,
#Partially deleted in new
chr2	85839195	85888954	chr2:85839195-85888954	0	-	85870196	85888905	789624	6	1197,344,112,124,187,131,	0,8665,21985,24166,30876,49628,
#Partially deleted in new
chr2	85839195	85854175	chr2:85839195-85854175	0	-	85839195	85839195	8553170	7	1197,159,187,181,521,440,1316,	0,5200,7181,8186,8665,12068,13664,
#Partially deleted in new
chr2	85839195	85888762	chr2:85839195-85888762	1	-	85840143	85863483	789624	8	1197,159,187,344,112,124,187,155,	0,5200,7181,8665,21985,24166,30876,49412,
#Partially deleted in new
chr2	85839195	85888776	chr2:85839195-85888776	1	-	85840143	85863483	789624	7	1197,159,187,344,112,124,169,	0,5200,7181,8665,21985,24166,49412,
#Partially deleted in new
chr2	85839197	85888826	chr2:85839197-85888826	0	-	85848121	85888826	789624	8	1195,159,187,344,232,112,124,3,	0,5198,7179,8663,13662,21983,24164,49626,
#Partially deleted in new
chr2	85839203	85888685	chr2:85839203-85888685	1	-	85840143	85863483	789624	6	1189,187,344,112,124,78,	0,7173,8657,21977,24158,49404,
#Partially deleted in new
chr2	85839203	85889000	chr2:85839203-85889000	0	-	85847960	85888905	789624	6	1189,159,187,344,124,177,	0,5192,7173,8657,24158,49620,
#Partially deleted in new
chr2	85839205	85888721	chr2:85839205-85888721	0	-	85852901	85863483	789624	10	1187,159,187,344,440,141,112,124,187,114,	0,5190,7171,8655,12058,13654,21975,24156,30866,49402,
#Partially deleted in new
chr2	85839205	85888910	chr2:85839205-85888910	1	-	85840143	85863483	789624	8	1187,159,187,344,112,124,131,87,	0,5190,7171,8655,21975,24156,36209,49618,
#Partially deleted in new
chr2	85839205	85888903	chr2:85839205-85888903	0	-	85840143	85888903	789624	7	1187,126,187,344,112,124,80,	0,5190,7171,8655,21975,24156,49618,
#Partially deleted in new
chr2	85839205	85888997	chr2:85839205-85888997	0	-	85853093	85888905	789624	9	1187,159,187,344,440,240,112,124,174,	0,5190,7171,8655,12058,13654,21975,24156,49618,
#Partially deleted in new
chr2	85839205	85888990	chr2:85839205-85888990	0	-	85848360	85888905	789624	7	1187,159,187,521,112,124,167,	0,5190,7171,8655,21975,24156,49618,
#Partially deleted in new
chr2	85839209	85889037	chr2:85839209-85889037	0	-	85851676	85888905	789624	8	1183,159,187,521,440,112,124,214,	0,5186,7167,8651,12054,21971,24152,49614,
#Partially deleted in new
chr2	85839209	85888908	chr2:85839209-85888908	0	-	85853093	85888905	789624	8	1183,159,187,344,240,112,124,85,	0,5186,7167,8651,13650,21971,24152,49614,
#Partially deleted in new
chr2	85839223	85863473	chr2:85839223-85863473	0	-	85852901	85863473	789624	6	1169,344,440,141,112,112,	0,8637,12040,13636,21957,24138,
#Partially deleted in new
chr2	85839262	85870239	chr2:85839262-85870239	0	-	85870196	85870239	789624	8	1130,159,187,181,344,112,124,168,	0,5133,7114,8119,8598,21918,24099,30809,
#Partially deleted in new
chr2	85839264	85888888	chr2:85839264-85888888	0	-	85847968	85888888	789624	9	1128,159,187,181,124,89,112,124,65,	0,5131,7112,8117,8596,8851,21916,24097,49559,
#Partially deleted in new
chr2	85839281	85888881	chr2:85839281-85888881	0	-	85870196	85888881	789624	8	1111,126,187,224,112,124,187,58,	0,5114,7095,8579,21899,24080,30790,49542,
#Partially deleted in new
chr2	85839640	85870175	chr2:85839640-85870175	0	-	85839640	85839640	8553170	7	752,159,48,344,112,124,104,	0,4755,6736,8220,21540,23721,30431,
#Partially deleted in new
chr2	85839813	85863449	chr2:85839813-85863449	0	-	85848360	85863449	789624	4	579,521,112,88,	0,8047,21367,23548,
#Partially deleted in new
chr2	85839882	85863464	chr2:85839882-85863464	0	-	85852901	85863464	789624	8	510,159,187,521,440,141,112,103,	0,4513,6494,7978,11381,12977,21298,23479,
#Partially deleted in new
chr2	85840064	85870179	chr2:85840064-85870179	0	-	85840064	85840064	8553170	6	328,187,344,112,124,108,	0,6312,7796,21116,23297,30007,
#Partially deleted in new
chr2	85840357	85863450	chr2:85840357-85863450	0	-	85846542	85863450	789624	5	35,159,187,112,89,	0,4038,6019,20823,23004,
#Partially deleted in new
chr2	85844406	85846791	chr2:85844406-85846791	0	-	85844406	85844406	8553170	2	148,415,	0,1970,
#Partially deleted in new
chr2	85844407	85863462	chr2:85844407-85863462	0	-	85852901	85863462	789624	6	147,187,344,141,112,101,	0,1969,3453,8452,16773,18954,
#Partially deleted in new
chr2	85846405	85888988	chr2:85846405-85888988	0	-	85861242	85888905	789624	4	158,344,112,165,	0,1455,14775,42418,
#Partially deleted in new
chr2	85846447	85888905	chr2:85846447-85888905	0	-	85870196	85888905	789624	8	116,344,440,141,112,124,187,82,	0,1413,4816,6412,14733,16914,23624,42376,
#Partially deleted in new
chr2	85847996	85863369	chr2:85847996-85863369	0	-	85853093	85863369	789624	5	88,440,240,112,8,	0,3267,4863,13184,15365,
#Partially deleted in new
chr2	85848020	85888386	chr2:85848020-85888386	0	-	85848020	85863483	789624	4	184,112,124,110,	0,13160,15341,40256,
#Partially deleted in new
chr2	85848101	85870253	chr2:85848101-85870253	0	-	85870196	85870253	789624	6	103,440,240,112,124,182,	0,3162,4758,13079,15260,21970,
#Partially deleted in new
chr2	85848112	85888908	chr2:85848112-85888908	0	-	85851590	85888905	789624	6	92,440,232,112,124,85,	0,3151,4747,13068,15249,40711,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	85850991	85854194	chr2:85850991-85854194	0	-	85850991	85850991	8553170	2	712,1335,	0,1868,
#Partially deleted in new
chr2	85851393	85888910	chr2:85851393-85888910	0	-	85851393	85851393	8553170	5	310,238,112,124,87,	0,1466,9787,11968,37430,
#Partially deleted in new
chr2	85852967	85887940	chr2:85852967-85887940	0	-	85852967	85852967	8553170	4	33,112,124,534,	0,8213,10394,34439,
#Partially deleted in new
chr2	85853058	85888911	chr2:85853058-85888911	0	-	85870196	85888905	789624	5	33,112,124,187,88,	0,8122,10303,17013,35765,
#Partially deleted in new
chr2	85860921	85888916	chr2:85860921-85888916	0	-	85860921	85860921	8553170	3	371,124,93,	0,2440,27902,
#Partially deleted in new
chr2	85861281	85866200	chr2:85861281-85866200	0	-	85861281	85861281	8553170	3	11,124,343,	0,2080,4576,
#Partially deleted in new
chr2	85863372	85902609	chr2:85863372-85902609	0	-	85863372	85863483	789624	3	113,121,221,	0,30435,39016,
#Partially deleted in new
chr2	85889279	85890980	chr2:85889279-85890980	3	+	85889279	85889279	8553170	2	524,259,	0,1442,
#Deleted in new
chr2	85904278	85904727	chr2:85904278-85904727	3	+	85904278	85904278	8553170	1	449,	0,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr2	86020215	86106155	chr2:86020215-86106155	3	-	86027422	86105776	789624	34	7308,165,118,201,306,111,127,158,136,168,215,222,166,83,153,99,159,83,184,150,192,255,231,123,171,163,106,87,104,86,108,150,205,456,	0,7669,8378,9980,11114,12056,13445,18484,19111,20176,21673,22758,23923,25062,25401,26949,28668,28944,32601,33924,45058,49802,54814,57643,57898,60600,61385,62866,68350,68569,69606,78395,79752,85484,
#Partially deleted in new
chr2	86026327	86106155	chr2:86026327-86106155	1	-	86027422	86105776	789624	34	1196,165,118,201,123,111,127,158,136,168,215,222,166,83,153,99,159,83,184,150,192,255,231,123,171,163,106,87,104,86,108,150,205,456,	0,1557,2266,3868,5185,5944,7333,12372,12999,14064,15561,16646,17811,18950,19289,20837,22556,22832,26489,27812,38946,43690,48702,51531,51786,54488,55273,56754,62238,62457,63494,72283,73640,79372,
#Deleted in new
chr2	86027965	86028799	chr2:86027965-86028799	0	-	86027965	86027965	8553170	2	84,206,	0,628,
#Partially deleted in new
chr2	86031420	86037070	chr2:86031420-86037070	0	-	86031420	86031420	8553170	4	215,111,127,93,	0,851,2240,5557,
#Partially deleted in new
chr2	86031503	86038917	chr2:86031503-86038917	0	-	86031503	86031503	8553170	4	132,111,127,218,	0,768,2157,7196,
#Deleted in new
chr2	86039324	86040519	chr2:86039324-86040519	0	-	86039324	86039324	8553170	3	138,203,128,	0,673,1067,
#Partially deleted in new
chr2	86054137	86065714	chr2:86054137-86065714	0	-	86054137	86054137	8553170	2	152,441,	0,11136,
#Partially deleted in new
chr2	86078040	86105873	chr2:86078040-86105873	0	-	86078040	86078040	8553170	10	244,163,106,87,104,86,108,150,205,174,	0,2775,3560,5041,10525,10744,11781,20570,21927,27659,
#Partially deleted in new
chr2	86081616	86105886	chr2:86081616-86105886	0	-	86089877	86105776	789624	5	90,87,104,108,187,	0,1465,6949,8205,24083,
#Partially deleted in new
chr2	86083081	86105874	chr2:86083081-86105874	0	-	86089877	86105776	789624	5	87,104,86,108,175,	0,5484,5703,6740,22618,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr2	86106181	86142157	chr2:86106181-86142157	3	+	86106247	86137559	0	24	170,53,37,46,69,105,124,116,62,88,61,86,145,51,90,29,107,79,91,86,149,42,159,4689,	0,2168,2318,4931,10348,10873,12739,15297,17519,18813,19273,19613,20979,21759,24466,24896,26136,26996,27164,28110,28657,30339,30800,31287,
#Partially deleted in new
chr2	86106222	86117159	chr2:86106222-86117159	0	+	86106247	86108399	789624	7	129,83,53,37,46,69,105,	0,895,2127,2277,4890,10307,10832,
#Partially deleted in new
chr2	86106223	86123733	chr2:86106223-86123733	0	+	86106247	86123733	789624	8	128,53,37,46,69,105,116,33,	0,2126,2276,4889,10306,10831,15255,17477,
#Partially deleted in new
chr2	86106225	86117120	chr2:86106225-86117120	0	+	86106247	86110993	789624	6	126,53,37,181,69,66,	0,2124,2274,4752,10304,10829,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	86106225	86112095	chr2:86106225-86112095	0	+	86106225	86106225	8553170	5	126,53,37,46,306,	0,2124,2274,4887,5564,
#Deleted in new
chr2	86106243	86108925	chr2:86106243-86108925	0	+	86106243	86106243	8553170	3	108,53,426,	0,2106,2256,
#Partially deleted in new
chr2	86106247	86110993	chr2:86106247-86110993	1	+	86106247	86110993	789624	4	104,53,37,16,	0,2102,2252,4730,
#Partially deleted in new
chr2	86108344	86119181	chr2:86108344-86119181	0	+	86108344	86108344	8553170	6	58,37,46,69,105,261,	0,155,2768,8185,8710,10576,
#Partially deleted in new
chr2	86121464	86127661	chr2:86121464-86127661	0	+	86121464	86121464	8553170	6	130,62,88,61,86,501,	0,2236,3530,3990,4330,5696,
#Partially deleted in new
chr2	86121493	86127437	chr2:86121493-86127437	0	+	86121493	86121493	8553170	5	101,62,88,61,277,	0,2207,3501,3961,5667,
#Partially deleted in new
chr2	86127718	86133228	chr2:86127718-86133228	0	+	86127718	86127718	8553170	4	273,459,107,51,	0,2929,4599,5459,
#Partially deleted in new
chr2	86127871	86132832	chr2:86127871-86132832	0	+	86127871	86127871	8553170	4	120,90,29,515,	0,2776,3206,4446,
#Partially deleted in new
chr2	86127929	86136881	chr2:86127929-86136881	0	+	86127929	86127929	8553170	9	62,90,29,107,79,91,86,149,361,	0,2718,3148,4388,5248,5416,6362,6909,8591,
#Partially deleted in new
chr2	86127948	86135198	chr2:86127948-86135198	0	+	86127948	86127948	8553170	8	43,90,29,107,79,91,86,360,	0,2699,3129,4369,5229,5397,6343,6890,
#Partially deleted in new
chr2	86130889	86134955	chr2:86130889-86134955	0	+	86130889	86130889	8553170	5	217,107,259,82,117,	0,1428,2288,3406,3949,
#Deleted in new
chr2	86132823	86134985	chr2:86132823-86134985	0	+	86132823	86132823	8553170	4	433,91,86,147,	0,522,1468,2015,
#Deleted in new
chr2	86132877	86134936	chr2:86132877-86134936	0	+	86132877	86132877	8553170	5	186,79,91,86,98,	0,300,468,1414,1961,
#Deleted in new
chr2	86133268	86134877	chr2:86133268-86134877	0	+	86133268	86133268	8553170	3	168,86,39,	0,1023,1570,
#Deleted in new
chr2	86133322	86135198	chr2:86133322-86135198	0	+	86133322	86133322	8553170	3	114,82,360,	0,973,1516,
#Deleted in new
chr2	86135869	86136006	chr2:86135869-86136006	3	+	86135869	86135869	789624	1	137,	0,
#Partially deleted in new
chr2	86143931	86195002	chr2:86143931-86195002	1	-	86144267	86179480	789624	15	950,130,132,224,15,130,136,104,137,93,105,112,190,74,81,	0,2136,3770,7365,9628,14660,15604,18044,22576,26817,27276,29718,35501,37367,50990,
#Partially deleted in new
chr2	86143931	86195770	chr2:86143931-86195770	3	-	86144267	86195382	789624	15	950,130,132,224,15,130,136,104,137,96,138,112,190,74,433,	0,2136,3770,7365,9628,14660,15604,18044,22576,26817,27276,29718,35501,37367,51406,
#Partially deleted in new
chr2	86143931	86195472	chr2:86143931-86195472	1	-	86144267	86195382	789624	15	950,130,132,224,15,130,136,104,137,96,105,112,190,74,135,	0,2136,3770,7365,9628,14660,15604,18044,22576,26817,27276,29718,35501,37367,51406,
#Partially deleted in new
chr2	86143935	86173762	chr2:86143935-86173762	0	-	86144267	86173762	789624	11	946,130,132,224,15,130,136,104,137,105,113,	0,2132,3766,7361,9624,14656,15600,18040,22572,27272,29714,
#Partially deleted in new
chr2	86143935	86195403	chr2:86143935-86195403	1	-	86144267	86195382	789624	15	946,130,132,224,15,130,136,104,137,93,138,112,190,74,66,	0,2132,3766,7361,9624,14656,15600,18040,22572,26813,27272,29714,35497,37363,51402,
#Partially deleted in new
chr2	86143939	86195433	chr2:86143939-86195433	1	-	86144267	86195382	789624	14	942,130,132,224,15,130,136,104,137,93,112,190,74,96,	0,2128,3762,7357,9620,14652,15596,18036,22568,26809,29710,35493,37359,51398,
#Partially deleted in new
chr2	86143948	86195464	chr2:86143948-86195464	1	-	86144267	86195382	789624	8	753,66,93,105,112,190,74,127,	0,22630,26800,27259,29701,35484,37350,51389,
#Partially deleted in new
chr2	86158375	86195435	chr2:86158375-86195435	0	-	86158375	86158375	8553170	10	346,136,104,137,96,138,112,190,74,98,	0,1160,3600,8132,12373,12832,15274,21057,22923,36962,
#Partially deleted in new
chr2	86158476	86170801	chr2:86158476-86170801	0	-	86158476	86158476	8553170	5	245,136,128,137,53,	0,1059,3475,8031,12272,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	86159246	86195433	chr2:86159246-86195433	0	-	86171358	86195382	789624	9	425,104,137,96,174,112,190,74,96,	0,2729,7261,11502,11961,14403,20186,22052,36091,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	86159955	86160066	chr2:86159955-86160066	3	-	86159955	86159955	8553170	1	111,	0,
#Deleted in new
chr2	86170790	86171577	chr2:86170790-86171577	0	-	86170790	86170790	8553170	2	54,370,	0,417,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	86173507	86195450	chr2:86173507-86195450	0	-	86173507	86173507	8553170	4	254,190,74,113,	0,5925,7791,21830,
#Deleted in new
chr2	86193025	86193108	chr2:86193025-86193108	3	-	86193025	86193025	5263520	1	83,	0,
#Partially deleted in new
chr2	86195589	86196049	chr2:86195589-86196049	3	+	86195589	86195589	8553170	1	460,	0,
#Partially deleted in new
chr2	86199354	86212838	chr2:86199354-86212838	1	+	86199490	86212426	0	5	179,190,145,134,413,	0,6751,7828,11125,13071,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	86199456	86213794	chr2:86199456-86213794	3	+	86199490	86210668	0	4	77,190,145,3315,	0,6649,7726,11023,
#Partially deleted in new
chr2	86199456	86211045	chr2:86199456-86211045	1	+	86199490	86210534	789624	3	77,190,566,	0,6649,11023,
#Partially deleted in new
chr2	86199462	86213738	chr2:86199462-86213738	1	+	86199490	86213649	789624	5	71,190,145,134,111,	0,6643,7720,11017,14165,
#Partially deleted in new
chr2	86213992	86337654	chr2:86213992-86337654	3	-	86217099	86337510	789624	7	3118,178,114,121,77,73,176,	0,18632,37964,40701,49972,68177,123486,
#Partially deleted in new
chr2	86214250	86223785	chr2:86214250-86223785	0	-	86214250	86214250	8553170	3	2860,171,297,	0,5719,9238,
#Partially deleted in new
chr2	86215318	86282232	chr2:86215318-86282232	0	-	86217038	86282232	789624	9	1792,152,36,178,51,114,121,77,63,	0,4651,12044,17306,24702,36638,39375,48646,66851,
#Partially deleted in new
chr2	86215617	86282232	chr2:86215617-86282232	0	-	86217038	86282232	789624	7	1493,152,178,114,121,77,63,	0,4352,17007,36339,39076,48347,66552,
#Partially deleted in new
chr2	86216307	86337626	chr2:86216307-86337626	1	-	86217038	86337510	789624	9	803,152,36,178,114,121,77,73,148,	0,3662,11055,16317,35649,38386,47657,65862,121171,
#Partially deleted in new
chr2	86216516	86282232	chr2:86216516-86282232	0	-	86217038	86282232	789624	9	594,152,36,178,150,114,121,77,63,	0,3453,10846,16108,23405,35440,38177,47448,65653,
#Partially deleted in new
chr2	86216553	86337627	chr2:86216553-86337627	1	-	86217099	86337502	789624	6	557,178,114,121,77,149,	0,16071,35403,38140,47411,120925,
#Partially deleted in new
chr2	86216580	86337589	chr2:86216580-86337589	1	-	86217038	86337510	789624	5	530,178,77,73,111,	0,16044,47384,65589,120898,
#Partially deleted in new
chr2	86216793	86338083	chr2:86216793-86338083	1	-	86217099	86338076	789624	7	317,178,114,121,77,73,60,	0,15831,35163,37900,47171,65376,121230,
#Partially deleted in new
chr2	86232675	86255018	chr2:86232675-86255018	0	-	86232675	86232675	8553170	3	127,114,325,	0,19281,22018,
#Partially deleted in new
chr2	86232733	86337469	chr2:86232733-86337469	0	-	86232733	86232733	8553170	6	69,114,121,77,73,122,	0,19223,21960,31231,49436,104614,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	86251351	86282210	chr2:86251351-86282210	0	-	86251866	86282210	789624	4	719,121,77,41,	0,3342,12613,30818,
#Partially deleted in new
chr2	86263993	86337065	chr2:86263993-86337065	0	-	86263993	86263993	8553170	3	48,73,344,	0,18176,72728,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	86364135	86364265	chr2:86364135-86364265	3	+	86364135	86364135	8553170	1	130,	0,
#Partially deleted in new
chr2	86440646	86451123	chr2:86440646-86451123	0	+	86442047	86451123	789624	4	316,216,156,21,	0,1371,9160,10456,
#Partially deleted in new
chr2	86440800	86492716	chr2:86440800-86492716	3	+	86442047	86492119	789624	27	162,173,216,156,111,103,125,73,89,164,512,205,215,153,96,128,196,173,237,172,88,131,120,140,177,135,678,	0,471,1217,9006,10302,14284,15641,16004,16182,23252,25571,29403,33975,37076,37369,37807,39366,41129,41657,43186,44141,44928,48517,48719,50080,50340,51238,
#Partially deleted in new
chr2	86441147	86492712	chr2:86441147-86492712	1	+	86442047	86492119	789624	26	297,216,156,111,103,125,73,89,164,512,205,215,153,96,128,196,173,237,172,88,131,120,140,177,135,674,	0,870,8659,9955,13937,15294,15657,15835,22905,25224,29056,33628,36729,37022,37460,39019,40782,41310,42839,43794,44581,48170,48372,49733,49993,50891,
#Partially deleted in new
chr2	86441147	86492141	chr2:86441147-86492141	1	+	86442047	86492141	789624	27	297,216,156,111,103,125,73,89,164,512,205,215,153,96,128,196,173,237,172,88,131,120,140,177,135,51,48,	0,870,8659,9955,13937,15294,15657,15835,22905,25224,29056,33628,36729,37022,37460,39019,40782,41310,42839,43794,44581,48170,48372,49733,49993,50891,50946,
#Partially deleted in new
chr2	86441378	86492714	chr2:86441378-86492714	0	+	86442047	86478073	789624	22	66,216,156,111,103,125,73,89,164,512,205,215,389,1755,173,1701,88,131,120,1538,135,676,	0,639,8428,9724,13706,15063,15426,15604,22674,24993,28825,33397,36498,37229,40551,41079,43563,44350,47939,48141,49762,50660,
#Partially deleted in new
chr2	86441460	86492716	chr2:86441460-86492716	1	+	86442047	86492119	789624	26	28,216,156,111,103,125,73,89,164,512,205,215,153,96,128,196,173,237,172,88,131,120,140,177,135,678,	0,557,8346,9642,13624,14981,15344,15522,22592,24911,28743,33315,36416,36709,37147,38706,40469,40997,42526,43481,44268,47857,48059,49420,49680,50578,
#Partially deleted in new
chr2	86441994	86455143	chr2:86441994-86455143	0	+	86442047	86455143	789624	4	239,156,111,59,	0,7812,9108,13090,
#Partially deleted in new
chr2	86442323	86449887	chr2:86442323-86449887	0	+	86442323	86442323	8553170	2	271,81,	0,7483,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	86443177	86449897	chr2:86443177-86449897	0	+	86443177	86443177	8553170	2	357,91,	0,6629,
#Partially deleted in new
chr2	86449813	86456655	chr2:86449813-86456655	0	+	86449813	86449813	8553170	4	149,111,103,214,	0,1289,5271,6628,
#Partially deleted in new
chr2	86456432	86466833	chr2:86456432-86466833	0	+	86456432	86456432	8553170	6	134,73,89,53,164,462,	0,372,550,4346,7620,9939,
#Partially deleted in new
chr2	86466631	86474950	chr2:86466631-86474950	0	+	86466631	86466631	8553170	4	146,30,205,175,	0,707,3572,8144,
#Deleted in new
chr2	86484680	86489590	chr2:86484680-86489590	0	+	86484680	86484680	8553170	5	38,88,131,120,71,	0,261,1048,4637,4839,
#Deleted in new
chr2	86486927	86492716	chr2:86486927-86492716	0	+	86486927	86486927	8553170	3	2732,177,1576,	0,3953,4213,
#Deleted in new
chr2	86487693	86492715	chr2:86487693-86492715	0	+	86487693	86487693	8553170	4	1966,177,135,677,	0,3187,3447,4345,
#Deleted in new
chr2	86489176	86490928	chr2:86489176-86490928	0	+	86489176	86489176	8553170	3	261,140,48,	0,343,1704,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	86503430	86563477	chr2:86503430-86563477	3	-	86505803	86563348	0	6	2519,115,122,180,61,174,	0,4048,6927,25787,38821,59873,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	86504527	86563374	chr2:86504527-86563374	1	-	86505803	86563348	0	6	1422,115,72,110,61,71,	0,2951,5830,24760,37724,58776,
#Partially deleted in new
chr2	86505443	86563479	chr2:86505443-86563479	1	-	86505803	86529305	0	5	506,115,122,180,176,	0,2035,4914,23774,57860,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	86505667	86721122	chr2:86505667-86721122	3	-	86505803	86620461	789624	8	282,115,122,180,61,140,94,141,	0,1811,4690,23550,36584,114662,182564,215314,
#Partially deleted in new
chr2	86505774	86563166	chr2:86505774-86563166	0	-	86505774	86505774	8553170	6	175,115,122,180,61,74,	0,1704,4583,23443,36477,57318,
#Partially deleted in new
chr2	86505928	86542847	chr2:86505928-86542847	0	-	86505928	86505928	8553170	6	21,115,122,180,61,60,	0,1550,4429,23289,36323,36859,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	86507047	86512535	chr2:86507047-86512535	0	-	86507047	86507047	8553170	2	546,2178,	0,3310,
#Partially deleted in new
chr2	86510377	86561941	chr2:86510377-86561941	0	-	86510377	86510377	8553170	4	102,180,61,307,	0,18840,31874,51257,
#Partially deleted in new
chr2	86510423	86623028	chr2:86510423-86623028	0	-	86510423	86622886	789624	5	56,180,61,140,368,	0,18794,31828,109906,112237,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	86515203	86515308	chr2:86515203-86515308	3	-	86515203	86515203	8553170	1	105,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	86527047	86542313	chr2:86527047-86542313	0	-	86527047	86527047	8553170	3	194,180,62,	0,2170,15204,
#Partially deleted in new
chr2	86540642	86563440	chr2:86540642-86563440	0	-	86540642	86540642	8553170	3	722,61,137,	0,1609,22661,
#Partially deleted in new
chr2	86562069	86617349	chr2:86562069-86617349	0	+	86562069	86562069	8553170	6	178,75,132,95,164,174,	0,776,1198,1618,1907,55106,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	86562074	86617441	chr2:86562074-86617441	3	+	86562074	86562074	8553170	3	173,75,266,	0,629,55101,
#Partially deleted in new
chr2	86603392	86623855	chr2:86603392-86623855	3	-	86603842	86622886	789624	4	2026,116,140,1195,	0,8766,16937,19268,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	86603399	86614699	chr2:86603399-86614699	0	-	86603399	86603399	8553170	2	2019,2541,	0,8759,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	86604006	86618766	chr2:86604006-86618766	1	+	86604006	86604006	8553170	2	357,1591,	0,13169,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	86604289	86618055	chr2:86604289-86618055	1	+	86604289	86604289	8553170	3	74,193,880,	0,953,12886,
#Partially deleted in new
chr2	86604319	86622828	chr2:86604319-86622828	0	-	86604319	86604319	8553170	5	159,116,103,140,168,	0,7839,10835,16010,18341,
#Partially deleted in new
chr2	86604599	86623866	chr2:86604599-86623866	0	-	86604599	86604599	8553170	5	819,116,140,167,51,	0,7559,15730,18061,19216,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	86616430	86623045	chr2:86616430-86623045	0	-	86616430	86616430	8553170	3	1583,140,385,	0,3899,6230,
#Partially deleted in new
chr2	86616708	86623865	chr2:86616708-86623865	0	-	86616708	86616708	8553170	4	83,140,167,50,	0,3621,5952,7107,
#Partially deleted in new
chr2	86720172	86778041	chr2:86720172-86778041	3	+	86720667	86773411	789624	9	637,143,135,101,167,166,103,155,4694,	0,20754,31723,33285,44854,45686,49850,51385,53175,
#Partially deleted in new
chr2	86748227	86753545	chr2:86748227-86753545	0	+	86748227	86748227	8553170	3	263,135,88,	0,3668,5230,
#Partially deleted in new
chr2	86765512	86773425	chr2:86765512-86773425	0	+	86765512	86765512	8553170	5	90,166,103,155,78,	0,346,4510,6045,7835,
#Partially deleted in new
chr2	86771300	86773597	chr2:86771300-86773597	0	+	86771300	86771300	8553170	3	150,155,250,	0,257,2047,
#Partially deleted in new
chr2	86784609	86791680	chr2:86784609-86791680	1	-	86785919	86790825	0	6	1362,31,111,111,354,904,	0,3920,4713,5030,5718,6167,
#Partially deleted in new
chr2	86784609	86790895	chr2:86784609-86790895	1	-	86785919	86790825	0	5	1362,31,111,354,119,	0,3920,5030,5718,6167,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	86784610	86808396	chr2:86784610-86808396	3	-	86785919	86790825	0	9	1361,31,111,111,354,319,147,336,278,	0,3919,4712,5029,5717,6166,16900,22836,23508,
#Partially deleted in new
chr2	86785919	86790825	chr2:86785919-86790825	1	-	86785919	86790825	789624	5	52,31,111,354,49,	0,2610,3403,4408,4857,
#Partially deleted in new
chr2	86815338	86861924	chr2:86815338-86861924	1	-	86815614	86861865	789624	4	380,90,360,102,	0,37658,42718,46484,
#Partially deleted in new
chr2	86815346	86861915	chr2:86815346-86861915	1	-	86822328	86861865	789624	7	372,54,37,90,90,360,93,	0,6974,29575,31337,37650,42710,46476,
#Partially deleted in new
chr2	86815449	86861915	chr2:86815449-86861915	1	-	86815606	86861865	789624	5	269,37,90,360,93,	0,29472,37547,42607,46373,
#Partially deleted in new
chr2	86815556	86861915	chr2:86815556-86861915	3	-	86815606	86861865	789624	6	162,37,90,90,360,93,	0,29365,31127,37440,42500,46266,
#Partially deleted in new
chr2	86841581	86861924	chr2:86841581-86861924	1	-	86842306	86861865	789624	6	738,37,90,90,360,102,	0,3340,5102,11415,16475,20241,
#Partially deleted in new
chr2	86844631	86861924	chr2:86844631-86861924	1	-	86844631	86861865	789624	6	13,37,90,90,360,102,	0,290,2052,8365,13425,17191,
#Partially deleted in new
chr2	86871300	86912978	chr2:86871300-86912978	7	+	86871300	86871300	16724991	17	243,162,52,101,83,74,146,221,210,95,91,66,135,141,61,188,76,	0,1886,7216,7472,8168,12055,15283,16472,17766,21980,23491,23701,29497,32537,33204,36528,41602,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	86885074	86885731	chr2:86885074-86885731	7	-	86885074	86885074	16724991	1	657,	0,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr2	86907952	87013976	chr2:86907952-87013976	1	+	86907968	87012547	789624	23	64,65,112,153,231,146,196,88,210,182,176,124,159,138,147,180,84,118,95,2224,140,196,1464,	0,43343,44989,45545,49753,50329,55076,61275,63794,66120,66385,66728,67775,68200,68600,69627,69895,73130,76801,77623,86888,89610,104560,
#Partially deleted in new
chr2	86913782	86953036	chr2:86913782-86953036	0	+	86913849	86917538	789624	5	139,188,75,65,95,	0,3708,8835,37513,39159,
#Partially deleted in new
chr2	86913811	87012663	chr2:86913811-87012663	1	+	86913849	87012547	789624	23	110,65,112,153,231,146,196,88,210,182,176,124,159,138,147,180,84,118,95,2224,140,196,151,	0,37484,39130,39686,43894,44470,49217,55416,57935,60261,60526,60869,61916,62341,62741,63768,64036,67271,70942,71764,81029,83751,98701,
#Partially deleted in new
chr2	86917630	87012547	chr2:86917630-87012547	3	+	86917630	87012547	789624	23	48,65,112,153,231,146,196,88,210,182,176,124,159,138,147,180,84,118,95,2224,140,196,35,	0,33665,35311,35867,40075,40651,45398,51597,54116,56442,56707,57050,58097,58522,58922,59949,60217,63452,67123,67945,77210,79932,94882,
#Deleted in new
chr2	86930249	86930754	chr2:86930249-86930754	7	-	86930249	86930249	16724991	1	505,	0,
#Deleted in new
chr2	86934461	86934822	chr2:86934461-86934822	7	-	86934461	86934461	16724991	1	361,	0,
#Partially deleted in new
chr2	86942236	87012547	chr2:86942236-87012547	1	+	86942236	87012547	789624	23	72,65,112,153,231,146,196,88,210,182,176,124,159,138,147,180,84,118,95,2224,140,196,35,	0,9059,10705,11261,15469,16045,20792,26991,29510,31836,32101,32444,33491,33916,34316,35343,35611,38846,42517,43339,52604,55326,70276,
#Partially deleted in new
chr2	86976213	87012741	chr2:86976213-87012741	0	+	86976213	86976581	789624	10	77,136,180,84,118,95,2224,140,196,229,	0,350,1366,1634,4869,8540,9362,18627,21349,36299,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	87002558	87021852	chr2:87002558-87021852	3	-	87016302	87021783	789624	4	599,107,136,118,	0,13743,14994,19176,
#Partially deleted in new
chr2	87011129	87021852	chr2:87011129-87021852	0	-	87016302	87021783	789624	5	77,115,107,136,118,	0,1875,5172,6423,10605,
#Partially deleted in new
chr2	87011171	87021852	chr2:87011171-87021852	0	-	87016370	87021783	789624	5	35,115,107,183,118,	0,1833,5130,6334,10563,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	87012301	87018708	chr2:87012301-87018708	0	-	87012301	87012301	8553170	3	818,107,1156,	0,4000,5251,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	87012311	87021852	chr2:87012311-87021852	1	-	87016302	87021783	789624	4	808,107,136,118,	0,3990,5241,9423,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	87012624	87017985	chr2:87012624-87017985	0	-	87012624	87012624	8553170	4	495,107,136,33,	0,3677,4928,5328,
#Deleted in new
chr2	87015651	87017985	chr2:87015651-87017985	0	-	87015651	87015651	8553170	4	298,107,136,33,	0,650,1901,2301,
#Partially deleted in new
chr2	87030674	87076429	chr2:87030674-87076429	3	-	87030674	87030674	789624	11	233,83,135,92,235,272,119,215,179,143,511,	0,1141,1394,3477,6619,13038,16513,18914,22139,24983,45244,
#Partially deleted in new
chr2	87031814	87052992	chr2:87031814-87052992	7	-	87031814	87031814	16724991	8	84,135,92,235,272,119,215,179,	0,254,2337,5479,11898,15373,17774,20999,
#Partially deleted in new
chr2	87055657	87076060	chr2:87055657-87076060	7	-	87055657	87055657	16724991	2	143,142,	0,20261,
#Partially deleted in new
chr2	87118533	87120980	chr2:87118533-87120980	7	-	87118533	87118533	16724991	3	84,135,93,	0,258,2354,
#Partially deleted in new
chr2	87125197	87196629	chr2:87125197-87196629	7	+	87125197	87125197	16724991	31	75,269,92,149,79,37,71,179,215,119,272,235,92,135,83,79,75,77,91,54,194,87,118,78,68,139,87,96,199,135,116,	0,3349,4905,6771,12369,13058,13189,15629,18821,21313,24637,31082,34365,36419,36728,37752,39386,45373,45945,46137,47714,51950,54791,55868,56304,57761,60334,61949,63662,68245,71316,
#Deleted in new
chr2	87194785	87194859	chr2:87194785-87194859	3	+	87194785	87194785	5263520	1	74,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	87221112	87222488	chr2:87221112-87222488	7	-	87221112	87221112	16724991	1	1376,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	87249094	87253750	chr2:87249094-87253750	3	-	87249094	87249094	8553170	2	617,175,	0,4481,
#Deleted in new
chr2	87301657	87302251	chr2:87301657-87302251	7	+	87301657	87301657	16724991	1	594,	0,
#Deleted in new
chr2	87338510	87339035	chr2:87338510-87339035	3	+	87338510	87339035	789624	2	49,301,	0,224,
#Deleted in new
chr2	87379879	87380767	chr2:87379879-87380767	7	-	87379879	87379879	16724991	1	888,	0,
#Partially deleted in new
chr2	87439522	87459044	chr2:87439522-87459044	3	-	87439522	87439522	8553170	2	371,188,	0,19334,
#Partially deleted in new
chr2	87439841	87445756	chr2:87439841-87445756	0	-	87439841	87439841	8553170	2	52,97,	0,5818,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	87454780	87630751	chr2:87454780-87630751	1	+	87454780	87454780	8553170	5	121,431,89,177,1705,	0,434,128477,151812,174266,
#Partially deleted in new
chr2	87455237	87521503	chr2:87455237-87521503	0	+	87455237	87455237	8553170	3	215,82,297,	0,326,65969,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	87455367	87590491	chr2:87455367-87590491	1	+	87455367	87455367	8553170	2	278,7234,	0,127890,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	87455408	87521514	chr2:87455408-87521514	1	+	87455408	87455408	8553170	4	44,82,138,308,	0,155,48078,65798,
#Partially deleted in new
chr2	87455426	87627504	chr2:87455426-87627504	2	+	87455426	87455426	8553170	5	26,82,89,177,825,	0,137,127831,151166,171253,
#Partially deleted in new
chr2	87455428	87521518	chr2:87455428-87521518	0	+	87455428	87455428	789624	2	217,312,	0,65778,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	87455428	87607680	chr2:87455428-87607680	0	+	87455428	87455428	8553170	3	217,89,1088,	0,127829,151164,
#Partially deleted in new
chr2	87455461	87607248	chr2:87455461-87607248	0	+	87455461	87455461	8553170	4	184,89,102,656,	0,127796,129709,151131,
#Partially deleted in new
chr2	87455461	87627504	chr2:87455461-87627504	1	+	87455461	87455461	8553170	4	184,89,100,825,	0,127796,151208,171218,
#Partially deleted in new
chr2	87455461	87521508	chr2:87455461-87521508	0	+	87455461	87455461	8553170	3	184,140,302,	0,24761,65745,
#Partially deleted in new
chr2	87455475	87606739	chr2:87455475-87606739	1	+	87455475	87455475	8553170	4	170,89,154,147,	0,127782,144593,151117,
#Partially deleted in new
chr2	87455475	87739214	chr2:87455475-87739214	0	+	87455475	87455475	8553170	18	170,89,177,70,268,149,79,37,71,179,215,119,272,235,92,135,83,198,	0,127782,151117,245508,248857,252286,257883,258572,258703,261136,264331,266825,270461,276911,280198,282242,282547,283541,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	87455478	87521413	chr2:87455478-87521413	1	+	87455478	87455478	8553170	4	167,155,146,207,	0,14671,17261,65728,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	87455478	87470848	chr2:87455478-87470848	0	+	87455478	87455478	8553170	2	167,699,	0,14671,
#Partially deleted in new
chr2	87455481	87607259	chr2:87455481-87607259	1	+	87455481	87455481	8553170	4	164,61,439,667,	0,127776,129352,151111,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	87455486	87607276	chr2:87455486-87607276	1	+	87455486	87455486	8553170	4	159,295,89,684,	0,117412,127771,151106,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr2	87455487	87767359	chr2:87455487-87767359	3	+	87455487	87455487	8553170	22	158,177,70,268,149,79,37,71,179,190,119,272,235,92,135,83,79,193,136,107,115,581,	0,151105,245496,248845,252274,257871,258560,258691,261124,264344,266813,270449,276899,280186,282230,282535,290915,292096,296759,298040,301332,311291,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	87455495	87521518	chr2:87455495-87521518	1	+	87455495	87455495	789624	4	150,109,201,312,	0,22626,24727,65711,
#Partially deleted in new
chr2	87455504	87521413	chr2:87455504-87521413	0	+	87455504	87455504	8553170	3	141,385,207,	0,24718,65702,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	87455505	87636740	chr2:87455505-87636740	0	+	87455505	87455505	8553170	5	140,155,89,177,459,	0,14644,127752,151087,180776,
#Partially deleted in new
chr2	87455514	87521513	chr2:87455514-87521513	1	+	87455514	87455514	8553170	3	131,222,307,	0,237,65692,
#Partially deleted in new
chr2	87455541	87521413	chr2:87455541-87521413	0	+	87455541	87455541	789624	3	104,146,207,	0,17198,65665,
#Deleted in new
chr2	87455545	87458963	chr2:87455545-87458963	1	-	87455545	87455545	8553170	2	819,107,	0,3311,
#Partially deleted in new
chr2	87455668	87521508	chr2:87455668-87521508	0	+	87455668	87455668	8553170	2	305,302,	0,65538,
#Deleted in new
chr2	87455718	87458577	chr2:87455718-87458577	0	+	87455718	87455718	8553170	2	255,630,	0,2229,
#Partially deleted in new
chr2	87455844	87521504	chr2:87455844-87521504	0	+	87455844	87455844	8553170	3	129,201,298,	0,24378,65362,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	87469949	87480775	chr2:87469949-87480775	0	+	87469949	87469949	8553170	3	93,155,553,	0,200,10273,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	87469949	87521413	chr2:87469949-87521413	0	+	87469949	87469949	8553170	3	93,155,207,	0,200,51257,
#Deleted in new
chr2	87477494	87478034	chr2:87477494-87478034	3	-	87477494	87477494	8553170	1	540,	0,
#Partially deleted in new
chr2	87487501	87521508	chr2:87487501-87521508	0	+	87487501	87487501	8553170	2	117,302,	0,33705,
#Partially deleted in new
chr2	87509213	87521514	chr2:87509213-87521514	0	+	87509213	87509213	8553170	2	114,308,	0,11993,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	87516715	87521496	chr2:87516715-87521496	0	+	87516715	87516715	8553170	2	945,290,	0,4491,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	87516744	87583830	chr2:87516744-87583830	0	+	87516744	87516744	8553170	2	110,573,	0,66513,
#Deleted in new
chr2	87518612	87521513	chr2:87518612-87521513	0	+	87518612	87518612	8553170	2	443,307,	0,2594,
#Partially deleted in new
chr2	87565827	87566764	chr2:87565827-87566764	7	-	87565827	87565827	16724991	1	937,	0,
#Deleted in new
chr2	87580983	87583481	chr2:87580983-87583481	0	+	87580983	87580983	8553170	2	263,224,	0,2274,
#Deleted in new
chr2	87581670	87583481	chr2:87581670-87583481	0	+	87581670	87581670	8553170	2	280,224,	0,1587,
#Partially deleted in new
chr2	87584097	87607265	chr2:87584097-87607265	0	+	87584097	87584097	8553170	2	1175,673,	0,22495,
#Deleted in new
chr2	87603977	87607248	chr2:87603977-87607248	0	+	87603977	87603977	8553170	2	183,656,	0,2615,
#Partially deleted in new
chr2	87604088	87629665	chr2:87604088-87629665	0	+	87604088	87604088	8553170	3	72,177,619,	0,2504,24958,
#Partially deleted in new
chr2	87604088	87636738	chr2:87604088-87636738	0	+	87604088	87604088	8553170	3	72,177,457,	0,2504,32193,
#Deleted in new
chr2	87604089	87607259	chr2:87604089-87607259	0	+	87604089	87604089	8553170	2	68,667,	0,2503,
#Deleted in new
chr2	87629754	87629834	chr2:87629754-87629834	3	+	87629754	87629754	5263520	1	80,	0,
#Deleted in new
chr2	87654889	87655243	chr2:87654889-87655243	7	+	87654889	87654889	16724991	1	354,	0,
#Partially deleted in new
chr2	87700983	87738105	chr2:87700983-87738105	7	+	87700983	87700983	16724991	15	70,268,66,149,79,37,71,179,215,119,272,235,92,135,83,	0,3349,4921,6778,12375,13064,13195,15628,18823,21317,24953,31403,34690,36734,37039,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	87748086	87757633	chr2:87748086-87757633	3	+	87748153	87753633	789624	4	116,136,107,814,	0,4160,5441,8733,
#Partially deleted in new
chr2	87748099	87758793	chr2:87748099-87758793	0	+	87748153	87753633	789624	5	103,136,107,115,61,	0,4147,5428,8720,10633,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	87751226	87757633	chr2:87751226-87757633	0	+	87751226	87751226	8553170	3	1156,107,814,	0,2301,5593,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr2	87755954	87825952	chr2:87755954-87825952	3	-	87757391	87825729	789624	23	1472,196,140,2224,95,118,84,180,147,138,159,124,176,182,210,88,196,146,231,153,112,65,295,	0,16214,18989,26169,29120,32767,36035,36207,37267,37676,38080,39162,39453,39712,42010,44650,50741,55530,56021,60314,60911,62604,69703,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr2	87771405	87825767	chr2:87771405-87825767	1	-	87771405	87825729	789624	23	28,200,140,2224,95,118,84,180,147,138,159,124,176,182,210,88,196,146,231,153,112,65,110,	0,759,3538,10718,13669,17316,20584,20756,21816,22225,22629,23711,24002,24261,26559,29199,35290,40079,40570,44863,45460,47153,54252,
#Partially deleted in new
chr2	87781177	87782669	chr2:87781177-87782669	0	-	87781177	87781177	8553170	2	60,546,	0,946,
#Deleted in new
chr2	87824941	87825143	chr2:87824941-87825143	7	+	87824941	87824941	16724991	1	202,	0,
#Deleted in new
chr2	87968608	87968971	chr2:87968608-87968971	7	+	87968608	87968608	16724991	1	363,	0,
#Deleted in new
chr2	87972655	87973082	chr2:87972655-87973082	7	+	87972655	87972655	16724991	1	427,	0,
#Partially deleted in new
chr2	87980713	87992858	chr2:87980713-87992858	7	-	87980713	87980713	16724991	5	76,188,61,141,135,	0,5013,8395,8982,12010,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	88016353	88016547	chr2:88016353-88016547	3	-	88016353	88016353	8553170	1	194,	0,
#Partially deleted in new
chr2	88027204	88055729	chr2:88027204-88055729	3	-	88027783	88028563	789624	4	1381,159,109,104,	0,6929,9738,28421,
#Partially deleted in new
chr2	88067779	88113387	chr2:88067779-88113387	3	+	88067864	88110512	789624	10	222,177,214,131,39,190,93,164,169,3034,	0,16536,20082,23232,25737,28815,35278,38545,40591,42574,
#Partially deleted in new
chr2	88067824	88110854	chr2:88067824-88110854	1	+	88067864	88110512	789624	9	177,177,214,131,190,93,164,169,501,	0,16491,20037,23187,28770,35233,38500,40546,42529,
#Partially deleted in new
chr2	88067861	88112484	chr2:88067861-88112484	1	+	88067864	88112119	789624	3	140,157,383,	0,16454,44240,
#Deleted in new
chr2	88082518	88082599	chr2:88082518-88082599	3	-	88082518	88082518	5263520	1	81,	0,
#Partially deleted in new
chr2	88083052	88091025	chr2:88083052-88091025	0	+	88083052	88083052	8553170	4	167,177,214,14,	0,1263,4809,7959,
#Partially deleted in new
chr2	88122981	88128116	chr2:88122981-88128116	3	-	88123053	88128017	0	4	123,93,173,166,	0,1512,3194,4969,
#Partially deleted in new
chr2	88123019	88128049	chr2:88123019-88128049	1	-	88124451	88128017	789624	3	1567,173,99,	0,3156,4931,
#Partially deleted in new
chr2	88123028	88128041	chr2:88123028-88128041	0	-	88123028	88123028	8553170	4	1558,173,262,91,	0,3147,3456,4922,
#Deleted in new
chr2	88125911	88128059	chr2:88125911-88128059	0	-	88125911	88125911	8553170	2	437,109,	0,2039,
#Partially deleted in new
chr2	88170294	88186636	chr2:88170294-88186636	1	+	88175304	88185975	789624	6	162,153,231,149,126,739,	0,4954,8488,12404,12653,15603,
#Partially deleted in new
chr2	88170352	88174795	chr2:88170352-88174795	0	+	88173150	88174795	789624	4	104,81,235,157,	0,874,2786,4286,
#Partially deleted in new
chr2	88170352	88186626	chr2:88170352-88186626	1	+	88171303	88185968	789624	7	104,81,123,195,153,231,729,	0,874,2898,4286,4896,8430,15545,
#Partially deleted in new
chr2	88170397	88186627	chr2:88170397-88186627	1	+	88173150	88185691	789624	9	59,235,195,153,231,149,126,174,730,	0,2741,4241,4851,8385,12301,12550,15153,15500,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	88171459	88186626	chr2:88171459-88186626	3	+	88173150	88186123	789624	8	1914,195,153,231,149,126,152,729,	0,3179,3789,7323,11239,11488,13868,14438,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	88173272	88177141	chr2:88173272-88177141	0	+	88173272	88173272	8553170	3	101,195,1893,	0,1366,1976,
#Partially deleted in new
chr2	88174807	88186318	chr2:88174807-88186318	0	+	88174807	88174807	8553170	6	26,153,231,149,126,421,	0,441,3975,7891,8140,11090,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	88178949	88183457	chr2:88178949-88183457	0	+	88178949	88178949	8553170	3	64,149,510,	0,3749,3998,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	88182554	88183077	chr2:88182554-88183077	0	+	88182554	88182554	8553170	2	293,130,	0,393,
#Partially deleted in new
chr2	88182696	88183807	chr2:88182696-88183807	0	+	88182696	88182696	8553170	3	151,126,87,	0,251,1024,
#Deleted in new
chr2	88364694	88365608	chr2:88364694-88365608	7	-	88364694	88364694	16724991	1	914,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	88367792	88367862	chr2:88367792-88367862	3	-	88367792	88367792	8553170	1	70,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	88383493	88383597	chr2:88383493-88383597	3	-	88383493	88383493	8553170	1	104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	88414897	88415004	chr2:88414897-88415004	3	-	88414897	88414897	8553170	1	107,	0,
#Partially deleted in new
chr2	88428077	88428615	chr2:88428077-88428615	7	+	88428077	88428077	16724991	2	85,118,	0,420,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	88446786	88452656	chr2:88446786-88452656	3	-	88448206	88452535	789624	2	2043,761,	0,5109,
#Partially deleted in new
chr2	88524650	88529584	chr2:88524650-88529584	3	+	88525644	88529474	789624	4	132,37,93,533,	0,984,1754,4401,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	88538719	88575610	chr2:88538719-88575610	3	+	88538719	88538719	789624	3	535,115,1097,	0,1345,35794,
#Partially deleted in new
chr2	88556740	88624929	chr2:88556740-88624929	1	-	88557735	88595648	789624	17	1196,63,102,168,781,150,123,113,221,123,141,163,235,134,195,130,184,	0,2176,5548,14133,17925,19813,22777,26689,29100,31241,32020,33702,34077,36531,38728,56983,68005,
#Partially deleted in new
chr2	88556742	88627576	chr2:88556742-88627576	3	-	88557735	88627274	0	17	1194,63,102,168,781,150,123,113,221,123,141,163,235,134,195,130,610,	0,2174,5546,14131,17923,19811,22775,26687,29098,31239,32018,33700,34075,36529,38726,56981,70224,
#Partially deleted in new
chr2	88557853	88595857	chr2:88557853-88595857	0	-	88557853	88595825	789624	16	83,63,102,168,781,150,123,113,221,123,141,163,235,134,195,107,	0,1063,4435,13020,16812,18700,21664,25576,27987,30128,30907,32589,32964,35418,37615,37897,
#Deleted in new
chr2	88570919	88575408	chr2:88570919-88575408	0	-	88570919	88570919	8553170	3	122,412,48,	0,3746,4441,
#Partially deleted in new
chr2	88575382	88579969	chr2:88575382-88579969	0	-	88575382	88575382	8553170	3	64,150,452,	0,1171,4135,
#Partially deleted in new
chr2	88590818	88594078	chr2:88590818-88594078	0	-	88590818	88590818	8553170	3	234,134,166,	0,2453,3094,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	88627538	88631819	chr2:88627538-88631819	3	+	88627538	88627538	789624	2	1194,420,	0,3861,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	88628170	88631821	chr2:88628170-88631821	1	+	88628170	88628170	8553170	1	3651,	0,
#Partially deleted in new
chr2	88691643	88750935	chr2:88691643-88750935	3	+	88691698	88750078	789624	9	340,61,56,60,65,69,142,100,955,	0,6840,8365,37634,42908,44025,44891,46333,58337,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	88765806	88779565	chr2:88765806-88779565	5	+	88765806	88765806	16724991	4	390,72,73,1364,	0,7166,10694,12395,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	88765867	88806612	chr2:88765867-88806612	7	+	88765867	88765867	16724991	15	329,72,73,29,73,29,206,29,73,29,73,74,3782,30,497,	0,7105,10633,16866,16985,18730,18853,20602,20723,22450,22574,26553,35231,39511,40248,
#Partially deleted in new
chr2	88765880	88776575	chr2:88765880-88776575	4	+	88765880	88765880	16724991	2	316,75,	0,10620,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	88765901	88806602	chr2:88765901-88806602	4	+	88765901	88765901	16724991	17	295,72,73,29,73,29,206,29,73,29,73,74,207,71,94,30,280,	0,7071,10599,16832,16951,18696,18819,20568,20689,22416,22540,26519,35197,38478,38885,39477,40421,
#Partially deleted in new
chr2	88765942	88773568	chr2:88765942-88773568	4	+	88765942	88765942	16724991	3	254,72,177,	0,7030,7449,
#Partially deleted in new
chr2	88782711	88805403	chr2:88782711-88805403	5	+	88782711	88782711	16724991	15	51,73,29,73,29,73,29,73,74,142,256,153,71,94,25,	0,141,1886,2009,3758,3879,5606,5730,9709,14570,18342,20001,21668,22075,22667,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	88800929	88806611	chr2:88800929-88806611	4	+	88800929	88800929	16724991	3	376,501,1233,	0,3450,4449,
#Partially deleted in new
chr2	88811185	88825207	chr2:88811185-88825207	7	-	88811185	88811185	16724991	3	510,156,232,	0,7088,13790,
#Partially deleted in new
chr2	88811185	88861563	chr2:88811185-88861563	3	-	88811185	88811185	8553170	3	510,156,39,	0,7088,50339,
#Partially deleted in new
chr2	88811632	88818429	chr2:88811632-88818429	5	-	88811632	88811632	16724991	3	63,123,156,	0,2675,6641,
#Deleted in new
chr2	88812369	88812454	chr2:88812369-88812454	3	+	88812369	88812369	5263520	1	85,	0,
#Deleted in new
chr2	88857160	88857683	chr2:88857160-88857683	3	-	88857360	88857683	8553170	1	523,	0,
#Deleted in new
chr2	88860567	88860605	chr2:88860567-88860605	3	-	88860567	88860605	789624	1	38,	0,
#Deleted in new
chr2	88860885	88860922	chr2:88860885-88860922	3	-	88860885	88860922	789624	1	37,	0,
#Deleted in new
chr2	88861220	88861258	chr2:88861220-88861258	3	-	88861220	88861258	789624	1	38,	0,
#Deleted in new
chr2	88861524	88861563	chr2:88861524-88861563	3	-	88861524	88861563	789624	1	39,	0,
#Deleted in new
chr2	88861885	88861923	chr2:88861885-88861923	3	-	88861885	88861923	789624	1	38,	0,
#Deleted in new
chr2	88885396	88886153	chr2:88885396-88886153	3	+	88885571	88886153	0	2	224,314,	0,443,
#Deleted in new
chr2	88897231	88897784	chr2:88897231-88897784	3	+	88897294	88897784	789624	2	112,296,	0,257,
#Deleted in new
chr2	88915080	88915378	chr2:88915080-88915378	7	-	88915080	88915080	16724991	1	298,	0,
#Partially deleted in new
chr2	88922327	88922753	chr2:88922327-88922753	7	-	88922327	88922327	16724991	1	426,	0,
#Deleted in new
chr2	88931665	88932380	chr2:88931665-88932380	7	-	88931665	88931665	16724991	2	289,51,	0,664,
#Deleted in new
chr2	88947300	88947957	chr2:88947300-88947957	3	-	88947300	88947776	789624	2	296,236,	0,421,
#Deleted in new
chr2	88966261	88966767	chr2:88966261-88966767	3	-	88966261	88966738	789624	2	296,84,	0,422,
#Partially deleted in new
chr2	88978467	88979081	chr2:88978467-88979081	3	-	88978467	88978984	789624	2	299,146,	0,468,
#Deleted in new
chr2	88992408	88992931	chr2:88992408-88992931	3	-	88992408	88992878	789624	2	296,102,	0,421,
#Partially deleted in new
chr2	89009981	89010515	chr2:89009981-89010515	3	-	89009981	89010457	789624	2	296,113,	0,421,
#Partially deleted in new
chr2	89019991	89020686	chr2:89019991-89020686	7	-	89019991	89019991	16724991	2	301,50,	0,645,
#Partially deleted in new
chr2	89027170	89027731	chr2:89027170-89027731	3	-	89027170	89027684	0	2	296,96,	0,465,
#Deleted in new
chr2	89040223	89040745	chr2:89040223-89040745	3	-	89040223	89040698	789624	2	296,102,	0,420,
#Deleted in new
chr2	89045994	89046466	chr2:89045994-89046466	7	-	89045994	89045994	16724991	2	292,55,	0,417,
#Partially deleted in new
chr2	89078009	89078784	chr2:89078009-89078784	7	-	89078009	89078009	16724991	2	301,46,	0,729,
#Partially deleted in new
chr2	89085176	89085787	chr2:89085176-89085787	3	-	89085176	89085690	789624	2	296,146,	0,465,
#Partially deleted in new
chr2	89099858	89100361	chr2:89099858-89100361	3	-	89099858	89100334	789624	2	296,82,	0,421,
#Partially deleted in new
chr2	89117341	89117844	chr2:89117341-89117844	3	-	89117341	89117817	789624	2	296,82,	0,421,
#Partially deleted in new
chr2	89128723	89129483	chr2:89128723-89129483	7	-	89128723	89128723	16724991	2	293,50,	0,710,
#Partially deleted in new
chr2	89134974	89135257	chr2:89134974-89135257	7	-	89134974	89134974	16724991	1	283,	0,
#Partially deleted in new
chr2	89142573	89143160	chr2:89142573-89143160	3	-	89142573	89143108	0	2	299,101,	0,486,
#Deleted in new
chr2	89159750	89160366	chr2:89159750-89160366	3	-	89159750	89160302	789624	2	296,110,	0,506,
#Deleted in new
chr2	89170774	89171212	chr2:89170774-89171212	7	-	89170774	89170774	16724991	2	270,56,	0,382,
#Deleted in new
chr2	89172021	89172553	chr2:89172021-89172553	7	-	89172021	89172021	16724991	2	112,211,	0,321,
#Deleted in new
chr2	89176327	89177160	chr2:89176327-89177160	3	-	89176327	89177130	789624	2	311,79,	0,754,
#Deleted in new
chr2	89192499	89192752	chr2:89192499-89192752	7	-	89192499	89192499	16724991	1	253,	0,
#Deleted in new
chr2	89196095	89196829	chr2:89196095-89196829	7	-	89196095	89196095	16724991	2	294,49,	0,685,
#Duplicated in new
chr2	89203508	89203906	chr2:89203508-89203906	7	-	89203508	89203508	16724991	1	398,	0,
#Deleted in new
chr2	89213422	89213928	chr2:89213422-89213928	3	-	89213422	89213897	789624	2	296,86,	0,420,
#Deleted in new
chr2	89221697	89222461	chr2:89221697-89222461	3	-	89221697	89222431	789624	2	311,79,	0,685,
#Deleted in new
chr2	89234173	89234912	chr2:89234173-89234912	7	-	89234173	89234173	16724991	2	322,50,	0,689,
#Deleted in new
chr2	89244780	89245596	chr2:89244780-89245596	3	-	89244780	89245566	789624	2	311,79,	0,737,
#Deleted in new
chr2	89252210	89252736	chr2:89252210-89252736	7	-	89252210	89252210	16724991	2	283,46,	0,480,
#Deleted in new
chr2	89253570	89254015	chr2:89253570-89254015	7	-	89253570	89253570	16724991	2	262,49,	0,396,
#Deleted in new
chr2	89268000	89268506	chr2:89268000-89268506	0	-	89268000	89268475	0	2	296,86,	0,420,
#Deleted in new
chr2	89275297	89275787	chr2:89275297-89275787	7	-	89275297	89275297	16724991	2	244,49,	0,441,
#Deleted in new
chr2	89286688	89286973	chr2:89286688-89286973	7	-	89286688	89286688	16724991	1	285,	0,
#Deleted in new
chr2	89295232	89295455	chr2:89295232-89295455	7	-	89295232	89295232	16724991	1	223,	0,
#Deleted in new
chr2	89297263	89297785	chr2:89297263-89297785	3	-	89297263	89297738	789624	2	296,102,	0,420,
#Deleted in new
chr2	89309897	89310144	chr2:89309897-89310144	7	-	89309897	89309897	16724991	1	247,	0,
#Deleted in new
chr2	89319624	89320146	chr2:89319624-89320146	3	-	89319624	89320099	0	2	296,102,	0,420,
#Deleted in new
chr2	89330109	89330421	chr2:89330109-89330421	1	-	89330109	89330421	789624	1	312,	0,
#Deleted in new
chr2	89330115	89330429	chr2:89330115-89330429	2	-	89330115	89330429	789624	1	314,	0,
#Partially deleted in new
chr2	89533184	89547106	chr2:89533184-89547106	7	+	89533184	89533184	16724991	3	133,948,171,	0,4602,13751,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	89542841	89585615	chr2:89542841-89585615	7	-	89542841	89542841	16724991	3	995,135,66,	0,38164,42708,
#Partially deleted in new
chr2	89554089	89585652	chr2:89554089-89585652	5	-	89554089	89554089	16724991	4	511,78,135,103,	0,26468,26916,31460,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	89562092	89585596	chr2:89562092-89585596	4	-	89562092	89562092	16724991	3	592,135,47,	0,18913,23457,
#Partially deleted in new
chr2	89562334	89585608	chr2:89562334-89585608	4	-	89562334	89562334	16724991	4	350,78,135,59,	0,18223,18671,23215,
#Deleted in new
chr2	89580557	89581140	chr2:89580557-89581140	5	-	89580557	89580557	16724991	2	78,135,	0,448,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	89600570	89600680	chr2:89600570-89600680	3	+	89600570	89600570	8553170	1	110,	0,
#Partially deleted in new
chr2	89622212	89640635	chr2:89622212-89640635	7	-	89622212	89622212	16724991	9	213,65,110,165,182,105,102,117,198,	0,1480,2050,3495,3932,9380,9677,15328,18225,
#Deleted in new
chr2	89662600	89662977	chr2:89662600-89662977	7	+	89662600	89662600	16724991	1	377,	0,
#Partially deleted in new
chr2	89666032	89683204	chr2:89666032-89683204	7	+	89666032	89666032	16724991	4	172,143,128,176,	0,2683,3934,16996,
#Deleted in new
chr2	89851790	89852493	chr2:89851790-89852493	0	+	89851790	89852493	789624	2	16,316,	0,387,
#Deleted in new
chr2	89852185	89852497	chr2:89852185-89852497	3	+	89852185	89852497	789624	1	312,	0,
#Deleted in new
chr2	89862481	89862981	chr2:89862481-89862981	3	+	89862504	89862981	789624	2	78,298,	0,202,
#Deleted in new
chr2	89872462	89872702	chr2:89872462-89872702	7	+	89872462	89872462	16724991	1	240,	0,
#Deleted in new
chr2	89884739	89885216	chr2:89884739-89885216	3	+	89884739	89885216	789624	2	55,298,	0,179,
#Deleted in new
chr2	89887021	89887247	chr2:89887021-89887247	7	+	89887021	89887021	16724991	1	226,	0,
#Deleted in new
chr2	89895501	89895772	chr2:89895501-89895772	7	+	89895501	89895501	16724991	1	271,	0,
#Deleted in new
chr2	89906756	89907246	chr2:89906756-89907246	7	+	89906756	89906756	16724991	2	46,256,	0,234,
#Deleted in new
chr2	89913981	89914545	chr2:89913981-89914545	0	+	89914070	89914545	0	2	144,296,	0,268,
#Deleted in new
chr2	89928421	89928867	chr2:89928421-89928867	7	+	89928421	89928421	16724991	2	55,263,	0,183,
#Deleted in new
chr2	89929700	89930202	chr2:89929700-89930202	7	+	89929700	89929700	16724991	2	46,235,	0,267,
#Deleted in new
chr2	89936858	89937679	chr2:89936858-89937679	3	+	89936893	89937679	789624	2	84,311,	0,510,
#Deleted in new
chr2	89947511	89948269	chr2:89947511-89948269	0	+	89947541	89948269	789624	2	79,311,	0,447,
#Deleted in new
chr2	89947969	89948279	chr2:89947969-89948279	3	+	89947969	89948275	8553170	1	310,	0,
#Deleted in new
chr2	89959978	89960748	chr2:89959978-89960748	0	+	89960014	89960748	0	2	85,311,	0,459,
#Deleted in new
chr2	89960448	89960754	chr2:89960448-89960754	3	+	89960448	89960754	8553170	1	306,	0,
#Deleted in new
chr2	89968866	89969335	chr2:89968866-89969335	7	+	89968866	89968866	16724991	2	55,280,	0,189,
#Deleted in new
chr2	89985921	89986702	chr2:89985921-89986702	3	+	89985951	89986702	789624	2	79,311,	0,470,
#Deleted in new
chr2	89989986	89990221	chr2:89989986-89990221	7	+	89989986	89989986	16724991	1	235,	0,
#Deleted in new
chr2	90004796	90005629	chr2:90004796-90005629	3	+	90004826	90005629	789624	2	79,311,	0,522,
#Deleted in new
chr2	90009401	90009927	chr2:90009401-90009927	7	+	90009401	90009401	16724991	2	214,72,	0,454,
#Deleted in new
chr2	90010740	90011184	chr2:90010740-90011184	7	+	90010740	90010740	16724991	2	55,269,	0,175,
#Deleted in new
chr2	90021566	90022185	chr2:90021566-90022185	3	+	90021633	90022185	789624	2	113,296,	0,323,
#Partially deleted in new
chr2	90038847	90039479	chr2:90038847-90039479	3	+	90038944	90039479	789624	2	146,299,	0,333,
#Partially deleted in new
chr2	90046795	90047057	chr2:90046795-90047057	7	+	90046795	90046795	16724991	1	262,	0,
#Partially deleted in new
chr2	90052580	90053372	chr2:90052580-90053372	7	+	90052580	90052580	16724991	2	50,325,	0,467,
#Partially deleted in new
chr2	90069661	90070238	chr2:90069661-90070238	3	+	90069687	90070238	789624	2	75,296,	0,281,
#Partially deleted in new
chr2	90082634	90083291	chr2:90082634-90083291	3	+	90082815	90083291	789624	2	236,296,	0,361,
#Partially deleted in new
chr2	90100235	90100738	chr2:90100235-90100738	3	+	90100262	90100738	789624	2	82,296,	0,207,
#Partially deleted in new
chr2	90114837	90115402	chr2:90114837-90115402	3	+	90114886	90115402	789624	2	98,298,	0,267,
#Partially deleted in new
chr2	90121785	90122564	chr2:90121785-90122564	7	+	90121785	90121785	16724991	2	43,312,	0,467,
#Partially deleted in new
chr2	90154072	90154574	chr2:90154072-90154574	3	+	90154097	90154574	789624	2	80,296,	0,206,
#Partially deleted in new
chr2	90159839	90160335	chr2:90159839-90160335	3	+	90159859	90160335	789624	2	75,296,	0,200,
#Partially deleted in new
chr2	90172801	90173414	chr2:90172801-90173414	3	+	90172898	90173414	789624	2	146,298,	0,315,
#Partially deleted in new
chr2	90179888	90180587	chr2:90179888-90180587	7	+	90179888	90179888	16724991	2	49,232,	0,467,
#Deleted in new
chr2	90190192	90190681	chr2:90190192-90190681	3	+	90190212	90190681	789624	2	75,298,	0,191,
#Deleted in new
chr2	90209872	90210529	chr2:90209872-90210529	3	+	90210053	90210529	789624	2	236,296,	0,361,
#Deleted in new
chr2	90220726	90221384	chr2:90220726-90221384	3	+	90220907	90221384	789624	2	236,298,	0,360,
#Deleted in new
chr2	90234811	90235370	chr2:90234811-90235370	3	+	90234836	90235370	789624	2	83,301,	0,258,
#Deleted in new
chr2	90309229	90309333	chr2:90309229-90309333	7	+	90309229	90309229	16724991	1	104,	0,
#Deleted in new
chr2	90315365	90315836	chr2:90315365-90315836	7	-	90315365	90315365	16724991	2	298,49,	0,422,
#Deleted in new
chr2	90359808	90360032	chr2:90359808-90360032	7	-	90359808	90359808	16724991	1	224,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	90365736	90367699	chr2:90365736-90367699	3	+	90365736	90365736	8553170	1	1963,	0,
#Deleted in new
chr2	91578477	91578573	chr2:91578477-91578573	7	+	91578477	91578477	16724991	1	96,	0,
#Partially deleted in new
chr2	91580335	91580863	chr2:91580335-91580863	3	+	91580335	91580335	8553170	1	528,	0,
#Partially deleted in new
chr2	91589493	91621421	chr2:91589493-91621421	7	+	91589493	91589493	16724991	5	399,133,131,948,168,	0,13365,18001,22613,31760,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	91617159	91659972	chr2:91617159-91659972	7	-	91617159	91617159	16724991	3	995,135,64,	0,38208,42749,
#Partially deleted in new
chr2	91628760	91659929	chr2:91628760-91659929	4	-	91628760	91628760	16724991	3	193,135,21,	0,26607,31148,
#Partially deleted in new
chr2	91635239	91657885	chr2:91635239-91657885	4	-	91635239	91635239	16724991	4	718,78,135,173,	0,19680,20128,22473,
#Partially deleted in new
chr2	91636687	91655378	chr2:91636687-91655378	4	-	91636687	91636687	16724991	3	346,78,11,	0,18232,18680,
#Partially deleted in new
chr2	91642998	91659922	chr2:91642998-91659922	4	-	91642998	91642998	16724991	4	355,78,135,14,	0,11921,12369,16910,
#Deleted in new
chr2	91654919	91655502	chr2:91654919-91655502	5	-	91654919	91654919	16724991	2	78,135,	0,448,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	91674856	91674966	chr2:91674856-91674966	7	+	91674856	91674856	16724991	1	110,	0,
#Deleted in new
chr2	91684446	91685884	chr2:91684446-91685884	7	-	91684446	91684446	16724991	1	1438,	0,
#Partially deleted in new
chr2	91696451	91714745	chr2:91696451-91714745	5	-	91696451	91696451	16724991	8	217,119,188,198,141,102,117,117,	0,2045,3488,3902,9345,9663,15294,18177,
#Deleted in new
chr2	91723022	91723605	chr2:91723022-91723605	7	+	91723022	91723022	16724991	1	583,	0,
#Partially deleted in new
chr2	91736725	91767439	chr2:91736725-91767439	7	+	91736725	91736725	16724991	6	376,411,390,402,405,411,	0,2266,8119,15402,19073,30303,
#Deleted in new
chr2	91747939	91748986	chr2:91747939-91748986	7	-	91747939	91747939	16724991	1	1047,	0,
#Partially deleted in new
chr2	91775943	91781169	chr2:91775943-91781169	7	+	91775943	91775943	16724991	3	164,193,175,	0,4466,5051,
#Deleted in new
chr2	91817770	91818248	chr2:91817770-91818248	7	+	91817770	91817770	16724991	2	56,298,	0,180,
#Deleted in new
chr2	91840600	91843802	chr2:91840600-91843802	7	+	91840600	91840600	16724991	3	157,85,512,	0,2456,2690,
#Deleted in new
chr2	91859383	91859481	chr2:91859383-91859481	7	+	91859383	91859383	16724991	1	98,	0,
#Partially deleted in new
chr2	91877968	91880195	chr2:91877968-91880195	7	+	91877968	91877968	16724991	2	328,1501,	0,726,
#Partially deleted in new
chr2	91883075	91931714	chr2:91883075-91931714	7	-	91883075	91883075	16724991	8	236,134,109,150,107,176,128,144,	0,4387,5408,9314,10306,30970,47249,48495,
#Partially deleted in new
chr2	91892471	91914212	chr2:91892471-91914212	4	-	91892471	91892471	16724991	3	68,107,167,	0,910,21574,
#Deleted in new
chr2	91940667	91942040	chr2:91940667-91942040	7	+	91940667	91940667	16724991	1	1373,	0,
#Partially deleted in new
chr2	91957435	91963610	chr2:91957435-91963610	7	+	91957435	91957435	16724991	3	89,74,85,	0,4872,6090,
#Deleted in new
chr2	92006679	92007121	chr2:92006679-92007121	7	-	92006679	92006679	16724991	1	442,	0,
#Deleted in new
chr2	92034521	92035000	chr2:92034521-92035000	7	-	92034521	92034521	16724991	2	298,57,	0,422,
#Partially deleted in new
chr2	94575975	94587183	chr2:94575975-94587183	7	-	94575975	94575975	16724991	4	1664,153,108,103,	0,6897,9390,11105,
#Deleted in new
chr2	94582872	94585473	chr2:94582872-94585473	5	-	94582872	94582872	16724991	2	153,108,	0,2493,
#Partially deleted in new
chr2	94588521	94604573	chr2:94588521-94604573	3	+	94588521	94604573	789624	7	26,130,124,126,134,218,286,	0,6222,13970,14515,14846,15190,15766,
#Deleted in new
chr2	94725673	94725935	chr2:94725673-94725935	7	-	94725673	94725673	16724991	1	262,	0,
#Deleted in new
chr2	94734654	94735844	chr2:94734654-94735844	7	-	94734654	94734654	16724991	1	1190,	0,
#Deleted in new
chr2	94737336	94738249	chr2:94737336-94738249	7	+	94737336	94737336	16724991	1	913,	0,
#Partially deleted in new
chr2	94750581	94751293	chr2:94750581-94751293	7	+	94750581	94750581	16724991	1	712,	0,
#Deleted in new
chr2	94759258	94760279	chr2:94759258-94760279	7	-	94759258	94759258	16724991	3	154,64,286,	0,345,735,
#Deleted in new
chr2	94760773	94761116	chr2:94760773-94761116	7	-	94760773	94760773	16724991	1	343,	0,
#Deleted in new
chr2	94786687	94787261	chr2:94786687-94787261	7	-	94786687	94786687	16724991	1	574,	0,
#Partially deleted in new
chr2	94791102	94857282	chr2:94791102-94857282	7	-	94791102	94791102	16724991	22	41,223,215,280,130,113,150,924,181,164,71,73,29,85,70,31,56,138,107,174,115,316,	0,4693,6824,7631,15238,17368,22288,23979,26070,27658,31901,37903,38067,40904,44957,47710,54277,56914,58098,62099,62435,65864,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	94811045	94817801	chr2:94811045-94817801	4	-	94811045	94811045	16724991	2	4960,629,	0,6127,
#Deleted in new
chr2	94846532	94846639	chr2:94846532-94846639	3	-	94846532	94846532	8553170	1	107,	0,
#Deleted in new
chr2	94861361	94862667	chr2:94861361-94862667	7	+	94861361	94861361	16724991	1	1306,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	94867485	94947341	chr2:94867485-94947341	7	-	94867485	94867485	16724991	8	5820,161,167,155,75,59,59,128,	0,5903,13786,62533,63300,65447,67830,79728,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	94868684	94947341	chr2:94868684-94947341	5	-	94868684	94868684	16724991	10	2013,164,167,238,271,155,75,59,59,128,	0,4704,12587,18174,23823,61334,62101,64248,66631,78529,
#Deleted in new
chr2	94871432	94876823	chr2:94871432-94876823	0	+	94871432	94871432	8553170	6	645,774,144,223,155,271,	0,1384,2532,3343,4155,5120,
#Deleted in new
chr2	94871442	94876829	chr2:94871442-94876829	3	+	94871579	94876769	789624	6	635,71,144,223,155,277,	0,2077,2522,3333,4145,5110,
#Partially deleted in new
chr2	94886860	94892756	chr2:94886860-94892756	5	-	94886860	94886860	16724991	2	236,249,	0,5647,
#Deleted in new
chr2	94899565	94900661	chr2:94899565-94900661	7	-	94899565	94899565	16724991	1	1096,	0,
#Deleted in new
chr2	94900989	94901602	chr2:94900989-94901602	7	+	94900989	94900989	16724991	1	613,	0,
#Partially deleted in new
chr2	94912431	94912831	chr2:94912431-94912831	7	+	94912431	94912431	16724991	1	400,	0,
#Deleted in new
chr2	94953160	94953593	chr2:94953160-94953593	7	-	94953160	94953160	16724991	2	338,16,	0,417,
#Deleted in new
chr2	94961046	94961503	chr2:94961046-94961503	7	-	94961046	94961046	16724991	2	310,58,	0,399,
#Deleted in new
chr2	94964472	94964836	chr2:94964472-94964836	7	-	94964472	94964472	16724991	1	364,	0,
#Deleted in new
chr2	94971953	94972167	chr2:94971953-94972167	7	-	94971953	94971953	16724991	2	75,48,	0,166,
#Deleted in new
chr2	94974543	94974838	chr2:94974543-94974838	7	-	94974543	94974543	16724991	1	295,	0,
#Partially deleted in new
chr2	94991879	94994362	chr2:94991879-94994362	7	+	94991879	94991879	16724991	2	161,157,	0,2326,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	95003544	95003843	chr2:95003544-95003843	3	-	95003544	95003544	8553170	1	299,	0,
#Deleted in new
chr2	95025192	95026709	chr2:95025192-95026709	3	-	95025192	95025192	8553170	3	233,94,151,	0,1147,1366,
#Partially deleted in new
chr2	95025676	95044633	chr2:95025676-95044633	0	+	95025676	95025676	8553170	2	209,338,	0,18619,
#Partially deleted in new
chr2	95025683	95053996	chr2:95025683-95053996	3	+	95025792	95053455	789624	4	202,168,126,616,	0,22275,23897,27697,
#Partially deleted in new
chr2	95025792	95053992	chr2:95025792-95053992	1	+	95025792	95053455	789624	2	93,612,	0,27588,
#Partially deleted in new
chr2	95025792	95053992	chr2:95025792-95053992	1	+	95025792	95053455	789624	3	93,168,612,	0,22166,27588,
#Partially deleted in new
chr2	95025792	95053992	chr2:95025792-95053992	1	+	95025792	95053455	789624	3	93,126,612,	0,23788,27588,
#Deleted in new
chr2	95051394	95053176	chr2:95051394-95053176	3	-	95051394	95051394	8553170	2	463,134,	0,1648,
#Partially deleted in new
chr2	95087206	95122000	chr2:95087206-95122000	3	-	95087356	95121791	0	12	375,137,63,58,47,91,35,234,126,138,81,267,	0,3179,13267,13630,14470,17433,19216,20968,22709,27859,30658,34527,
#Partially deleted in new
chr2	95087207	95121799	chr2:95087207-95121799	0	-	95100857	95121791	0	11	374,137,63,58,47,35,234,126,138,81,66,	0,3178,13266,13629,14469,19215,20967,22708,27858,30657,34526,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	95087207	95093691	chr2:95087207-95093691	0	-	95087207	95087207	8553170	2	374,3306,	0,3178,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	95087323	95101953	chr2:95087323-95101953	0	-	95087323	95087323	8553170	5	258,137,63,58,277,	0,3062,13150,13513,14353,
#Partially deleted in new
chr2	95087406	95106653	chr2:95087406-95106653	0	-	95087406	95087406	8553170	6	175,137,63,58,47,231,	0,2979,13067,13430,14270,19016,
#Partially deleted in new
chr2	95103752	95121813	chr2:95103752-95121813	0	-	95103752	95103752	8553170	7	978,35,234,126,138,81,80,	0,2670,4422,6163,11313,14112,17981,
#Partially deleted in new
chr2	95104348	95106688	chr2:95104348-95106688	0	-	95104348	95104348	8553170	2	382,266,	0,2074,
#Partially deleted in new
chr2	95115121	95149434	chr2:95115121-95149434	0	-	95115121	95115121	8553170	3	82,81,550,	0,2743,33763,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	95147329	95155691	chr2:95147329-95155691	0	-	95147329	95147329	8553170	3	2938,96,2559,	0,5344,5803,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	95147936	95159607	chr2:95147936-95159607	1	-	95149281	95153253	789624	5	2331,96,127,89,368,	0,4737,5196,9414,11303,
#Partially deleted in new
chr2	95148302	95159337	chr2:95148302-95159337	1	-	95149281	95153253	789624	5	1965,96,127,89,478,	0,4371,4830,9048,10557,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	95152725	95165413	chr2:95152725-95165413	2	-	95152725	95165072	789624	3	44,127,383,	0,407,12305,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	95165431	95184317	chr2:95165431-95184317	1	+	95177575	95182106	789624	4	429,127,114,3215,	0,12051,14727,15671,
#Partially deleted in new
chr2	95165437	95182967	chr2:95165437-95182967	3	+	95176226	95182106	789624	5	423,72,127,114,1865,	0,10750,12045,14721,15665,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	95165465	95184317	chr2:95165465-95184317	1	+	95177575	95182106	789624	3	395,127,3215,	0,12017,15637,
#Partially deleted in new
chr2	95165788	95182455	chr2:95165788-95182455	1	+	95176226	95182106	789624	4	72,72,127,1353,	0,10399,11694,15314,
#Partially deleted in new
chr2	95165816	95182171	chr2:95165816-95182171	1	+	95176226	95182106	789624	5	44,72,127,114,1108,	0,10371,11666,14342,15247,
#Deleted in new
chr2	95196448	95197357	chr2:95196448-95197357	7	-	95196448	95196448	16724991	1	909,	0,
#Deleted in new
chr2	95207534	95215603	chr2:95207534-95215603	3	+	95207815	95215603	789624	5	300,89,103,90,1268,	0,1113,4083,4658,6801,
#Partially deleted in new
chr2	95207710	95259144	chr2:95207710-95259144	0	+	95207815	95259144	789624	5	124,89,103,90,69,	0,937,3907,4482,51365,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	95232060	95259774	chr2:95232060-95259774	0	+	95232060	95232060	8553170	3	38,161,255,	0,27015,27459,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr2	95274452	95291303	chr2:95274452-95291303	1	+	95274585	95288996	789624	24	377,50,203,121,64,90,203,75,64,160,153,124,92,85,147,72,93,54,81,69,90,107,74,2080,	0,1008,1477,1774,2141,2519,2911,3477,4268,4532,5392,6789,7472,7689,10516,11186,12026,12351,12680,12943,13758,14030,14480,14771,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr2	95274452	95291308	chr2:95274452-95291308	3	+	95274585	95288996	789624	24	377,50,203,121,64,90,203,75,64,160,153,124,92,85,147,72,93,54,81,69,90,107,74,1176,	0,1008,1477,1774,2141,2519,2911,3477,4268,4532,5392,6789,7472,7689,10516,11186,12026,12351,12680,12943,13758,14030,14480,15680,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr2	95274452	95291306	chr2:95274452-95291306	1	+	95274585	95288996	789624	24	377,50,203,121,64,90,203,75,64,160,153,124,92,85,147,72,93,54,81,69,90,107,74,274,	0,1008,1477,1774,2141,2519,2911,3477,4268,4532,5392,6789,7472,7689,10516,11186,12026,12351,12680,12943,13758,14030,14480,16580,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr2	95274472	95291267	chr2:95274472-95291267	0	+	95274472	95274472	8553170	20	357,50,203,121,133,1215,153,124,92,85,147,72,93,54,81,69,90,107,74,1135,	0,988,1457,1754,2891,3457,5372,6769,7452,7669,10496,11166,12006,12331,12660,12923,13738,14010,14460,15660,
#Deleted in new
chr2	95274491	95277996	chr2:95274491-95277996	0	+	95274491	95274491	8553170	6	338,41,64,90,133,67,	0,969,2102,2480,2872,3438,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr2	95274500	95291308	chr2:95274500-95291308	0	+	95274585	95276084	789624	24	329,50,264,121,64,90,133,75,64,160,153,124,92,85,147,72,93,54,81,69,90,107,74,1176,	0,960,1368,1726,2093,2471,2863,3429,4220,4484,5344,6741,7424,7641,10468,11138,11978,12303,12632,12895,13710,13982,14432,15632,
#Deleted in new
chr2	95274978	95276092	chr2:95274978-95276092	0	+	95274978	95274978	8553170	3	22,50,163,	0,482,951,
#Partially deleted in new
chr2	95277815	95279939	chr2:95277815-95279939	0	+	95277815	95277815	8553170	4	189,64,160,95,	0,905,1169,2029,
#Partially deleted in new
chr2	95279865	95286539	chr2:95279865-95286539	0	+	95279865	95279865	8553170	6	132,124,92,85,72,61,	0,1376,2059,2276,5773,6613,
#Deleted in new
chr2	95288506	95289375	chr2:95288506-95289375	0	+	95288506	95288506	8553170	2	83,443,	0,426,
#Deleted in new
chr2	95288514	95289648	chr2:95288514-95289648	0	+	95288514	95288514	8553170	3	75,74,425,	0,418,709,
#Partially deleted in new
chr2	95297303	95386083	chr2:95297303-95386083	3	+	95297438	95384049	0	9	150,166,125,70,71,108,105,63,2082,	0,13051,76992,77544,77834,84292,85073,85928,86698,
#Partially deleted in new
chr2	95297326	95299120	chr2:95297326-95299120	0	+	95297326	95297326	8553170	2	127,438,	0,1356,
#Partially deleted in new
chr2	95297337	95313896	chr2:95297337-95313896	0	+	95297337	95297337	8553170	2	116,3542,	0,13017,
#Partially deleted in new
chr2	95297346	95386077	chr2:95297346-95386077	0	+	95297346	95297346	8553170	9	107,246,125,70,71,108,105,63,2076,	0,57690,76949,77501,77791,84249,85030,85885,86655,
#Partially deleted in new
chr2	95297346	95303503	chr2:95297346-95303503	0	+	95297346	95297346	8553170	2	107,460,	0,5697,
#Partially deleted in new
chr2	95310221	95386076	chr2:95310221-95386076	1	+	95310221	95384049	789624	9	15,166,125,70,71,108,105,63,2075,	0,133,64074,64626,64916,71374,72155,73010,73780,
#Partially deleted in new
chr2	95346727	95384049	chr2:95346727-95384049	1	+	95347019	95384049	0	8	395,125,70,71,108,105,63,48,	0,27568,28120,28410,34868,35649,36504,37274,
#Partially deleted in new
chr2	95368506	95368885	chr2:95368506-95368885	7	-	95368506	95368506	16724991	1	379,	0,
#Partially deleted in new
chr2	95402720	95405802	chr2:95402720-95405802	0	+	95405558	95405802	789624	2	272,250,	0,2832,
#Partially deleted in new
chr2	95402722	95413096	chr2:95402722-95413096	1	+	95405558	95412957	789624	9	150,126,251,217,60,163,109,88,202,	0,2554,2830,4218,7804,8141,9711,9954,10172,
#Partially deleted in new
chr2	95402725	95416616	chr2:95402725-95416616	3	+	95405558	95412957	789624	8	147,251,217,60,163,109,88,3722,	0,2827,4215,7801,8138,9708,9951,10169,
#Partially deleted in new
chr2	95402790	95407076	chr2:95402790-95407076	0	+	95405558	95407076	789624	4	202,126,251,136,	0,2486,2762,4150,
#Deleted in new
chr2	95405273	95407513	chr2:95405273-95407513	0	+	95405273	95405273	8553170	3	129,251,573,	0,279,1667,
#Partially deleted in new
chr2	95406937	95412782	chr2:95406937-95412782	0	+	95406937	95406937	8553170	4	220,500,109,106,	0,3589,5496,5739,
#Deleted in new
chr2	95413455	95414296	chr2:95413455-95414296	7	-	95413455	95413455	16724991	3	112,56,49,	0,504,792,
#Deleted in new
chr2	95434758	95435113	chr2:95434758-95435113	7	+	95434758	95434758	16724991	1	355,	0,
#Deleted in new
chr2	95436132	95436556	chr2:95436132-95436556	7	+	95436132	95436132	16724991	1	424,	0,
#Deleted in new
chr2	95450309	95451500	chr2:95450309-95451500	7	-	95450309	95450309	16724991	1	1191,	0,
#Deleted in new
chr2	95460143	95460336	chr2:95460143-95460336	7	-	95460143	95460143	16724991	1	193,	0,
#Deleted in new
chr2	95468862	95469778	chr2:95468862-95469778	7	-	95468862	95468862	16724991	2	28,190,	0,726,
#Partially deleted in new
chr2	95476966	95484731	chr2:95476966-95484731	3	-	95477163	95482714	789624	7	679,98,23,231,96,415,126,	0,1793,2419,3338,4628,5337,7639,
#Partially deleted in new
chr2	95477163	95482714	chr2:95477163-95482714	1	-	95477163	95482714	789624	6	482,98,23,231,96,411,	0,1596,2222,3141,4431,5140,
#Deleted in new
chr2	95485540	95485805	chr2:95485540-95485805	7	+	95485540	95485540	16724991	1	265,	0,
#Deleted in new
chr2	95486479	95488627	chr2:95486479-95488627	7	-	95486479	95486479	16724991	3	283,79,382,	0,1065,1766,
#Deleted in new
chr2	95496021	95496531	chr2:95496021-95496531	7	-	95496021	95496021	16724991	1	510,	0,
#Partially deleted in new
chr2	95502790	95505059	chr2:95502790-95505059	7	+	95502790	95502790	16724991	2	97,187,	0,2082,
#Deleted in new
chr2	95514826	95520107	chr2:95514826-95520107	7	+	95514826	95514826	16724991	7	406,96,28,231,23,98,489,	0,886,1275,1685,2677,3644,4792,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	95525108	95526702	chr2:95525108-95526702	3	-	95525108	95525108	8553170	1	1594,	0,
#Partially deleted in new
chr2	95525344	95527220	chr2:95525344-95527220	5	+	95525344	95525344	16724991	2	439,988,	0,888,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	95526650	95532405	chr2:95526650-95532405	7	+	95526650	95526650	16724991	3	569,138,2335,	0,2567,3420,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	95528854	95532405	chr2:95528854-95532405	5	+	95528854	95528854	16724991	1	3551,	0,
#Partially deleted in new
chr2	95536116	95536495	chr2:95536116-95536495	7	-	95536116	95536116	16724991	1	379,	0,
#Deleted in new
chr2	95537968	95538469	chr2:95537968-95538469	3	+	95537968	95537968	8553170	1	501,	0,
#Deleted in new
chr2	95542729	95543230	chr2:95542729-95543230	7	-	95542729	95542729	16724991	1	501,	0,
#Deleted in new
chr2	95546530	95547545	chr2:95546530-95547545	7	+	95546530	95546530	16724991	1	1015,	0,
#Deleted in new
chr2	95574900	95580769	chr2:95574900-95580769	7	+	95574900	95574900	16724991	6	411,62,231,23,91,499,	0,695,2333,3268,4220,5370,
#Deleted in new
chr2	95588148	95589253	chr2:95588148-95589253	7	+	95588148	95588148	16724991	2	412,94,	0,1011,
#Deleted in new
chr2	95590968	95591206	chr2:95590968-95591206	7	-	95590968	95590968	16724991	1	238,	0,
#Partially deleted in new
chr2	95592017	95599778	chr2:95592017-95599778	3	+	95594023	95599573	789624	7	132,415,96,231,23,98,687,	0,2002,3032,4184,5311,5862,7074,
#Deleted in new
chr2	95606923	95607152	chr2:95606923-95607152	7	+	95606923	95606923	16724991	1	229,	0,
#Partially deleted in new
chr2	95607072	95616592	chr2:95607072-95616592	7	+	95607072	95607072	16724991	2	84,192,	0,9328,
#Deleted in new
chr2	95616491	95617233	chr2:95616491-95617233	7	+	95616491	95616491	16724991	1	742,	0,
#Deleted in new
chr2	95625212	95626236	chr2:95625212-95626236	7	+	95625212	95625212	16724991	1	1024,	0,
#Deleted in new
chr2	95633849	95636106	chr2:95633849-95636106	7	+	95633849	95633849	16724991	2	189,559,	0,1698,
#Deleted in new
chr2	95640180	95640604	chr2:95640180-95640604	7	-	95640180	95640180	16724991	1	424,	0,
#Deleted in new
chr2	95641633	95641980	chr2:95641633-95641980	7	-	95641633	95641633	16724991	1	347,	0,
#Deleted in new
chr2	95666083	95668715	chr2:95666083-95668715	3	+	95666083	95666083	8553170	2	320,799,	0,1833,
#Partially deleted in new
chr2	95789653	95797846	chr2:95789653-95797846	7	+	95789653	95789653	16724991	9	75,123,114,74,105,129,672,100,177,	0,2506,2779,3591,4077,4391,6835,7819,8016,
#Partially deleted in new
chr2	95792219	95800166	chr2:95792219-95800166	5	+	95792219	95792219	16724991	14	63,114,74,105,129,100,134,100,213,123,83,119,71,244,	0,213,1025,1511,1825,4269,4807,5253,5450,6054,6347,6756,7524,7703,
#Partially deleted in new
chr2	95807117	95814776	chr2:95807117-95814776	1	-	95807117	95807117	8553170	5	185,218,49,96,106,	0,6198,6791,6932,7553,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	95807117	95816215	chr2:95807117-95816215	3	-	95807117	95807117	8553170	2	185,2166,	0,6932,
#Partially deleted in new
chr2	95836918	95855377	chr2:95836918-95855377	1	-	95851171	95855337	789624	6	190,30,94,71,153,112,	0,14247,14775,15207,16790,18347,
#Partially deleted in new
chr2	95851165	95991793	chr2:95851165-95991793	3	-	95851171	95991708	789624	67	30,94,71,153,915,184,214,142,71,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,40,68,61,67,31,61,67,31,73,29,73,29,73,29,68,138,107,174,115,282,	0,528,960,2543,4100,6143,8695,16274,25273,29261,29429,31136,31303,33007,33174,34882,35050,36759,36926,38633,38800,40499,40666,47979,48142,61078,61241,62942,63109,64814,64977,66689,66848,70441,70616,72329,72495,74186,74353,76048,76215,77906,78073,84288,84450,87663,87821,89994,93461,93948,97364,99583,100182,102773,105620,107425,107591,109307,109473,111186,111353,126956,129482,131090,135585,135926,140346,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	95852289	95859929	chr2:95852289-95859929	0	-	95852289	95852289	8553170	4	1572,915,184,69,	0,2976,5019,7571,
#Partially deleted in new
chr2	95856007	95907499	chr2:95856007-95907499	0	-	95856007	95856007	8553170	31	173,184,214,142,71,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,63,73,29,73,29,73,29,63,73,706,	0,1301,3853,11432,20431,24419,24587,26294,26461,28165,28332,30040,30208,31917,32084,33791,33958,35657,35824,37525,37688,38205,39391,39554,46878,47045,48753,48916,49433,50623,50786,
#Partially deleted in new
chr2	95857457	95945121	chr2:95857457-95945121	0	-	95935516	95945121	789624	43	35,214,71,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,29,40,68,8,	0,2403,18981,22969,23137,24844,25011,26715,26882,28590,28758,30467,30634,32341,32508,34207,34374,41687,41850,54786,54949,56650,56817,58522,58685,60397,60556,64149,64324,66037,66203,67894,68061,69756,69923,71614,71781,77996,78158,81529,83702,87169,87656,
#Partially deleted in new
chr2	95857478	95944694	chr2:95857478-95944694	1	-	95860056	95935487	789624	42	14,214,71,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,29,40,68,	0,2382,18960,22948,23116,24823,24990,26694,26861,28569,28737,30446,30613,32320,32487,34186,34353,47282,53061,54765,54928,56629,56796,58501,58664,60376,62413,64128,64303,66016,66182,67873,68040,69735,69902,71593,71760,77975,78137,81508,83681,87148,
#Partially deleted in new
chr2	95927257	95991793	chr2:95927257-95991793	0	-	95935516	95991708	789624	27	29,29,73,29,73,29,29,40,68,61,67,31,61,67,31,73,29,73,29,73,29,68,138,107,174,115,282,	0,123,1814,1981,8196,8358,11729,13902,17369,17856,21272,23491,24090,26681,29528,31333,31499,33215,33381,35094,35261,50864,53390,54998,59493,59834,64254,
#Partially deleted in new
chr2	95986622	95991831	chr2:95986622-95991831	1	-	95986744	95991708	789624	3	302,115,320,	0,469,4889,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	96004562	96004850	chr2:96004562-96004850	3	-	96004562	96004562	8553170	1	288,	0,
#Partially deleted in new
chr2	96010550	96023249	chr2:96010550-96023249	5	+	96010550	96010550	16724991	4	182,109,98,576,	0,10574,10817,12123,
#Partially deleted in new
chr2	96010556	96021834	chr2:96010556-96021834	4	+	96010556	96010556	16724991	8	166,248,217,60,163,109,98,237,	0,3167,4552,8644,8981,10568,10811,11041,
#Partially deleted in new
chr2	96010607	96022732	chr2:96010607-96022732	4	+	96010607	96010607	16724991	4	244,109,98,59,	0,10517,10760,12066,
#Partially deleted in new
chr2	96010613	96023380	chr2:96010613-96023380	7	+	96010613	96010613	16724991	5	119,109,98,80,487,	0,10511,10754,12060,12280,
#Partially deleted in new
chr2	96013729	96021608	chr2:96013729-96021608	5	+	96013729	96013729	16724991	7	242,217,60,163,109,98,11,	0,1379,5471,5808,7395,7638,7868,
#Partially deleted in new
chr2	96021945	96034916	chr2:96021945-96034916	1	-	96022158	96032359	789624	22	330,56,66,121,132,78,149,241,71,119,83,123,213,100,134,100,129,105,74,114,123,100,	0,722,1012,1160,1363,1977,2243,2481,2827,3539,3984,4237,4751,5061,5473,6045,8460,8798,9315,10087,10351,12871,
#Partially deleted in new
chr2	96021945	96035974	chr2:96021945-96035974	3	-	96022158	96032359	789624	23	330,56,66,121,132,78,149,241,71,119,83,123,213,100,134,100,129,105,74,114,69,393,61,	0,722,1012,1160,1363,1977,2243,2481,2827,3539,3984,4237,4751,5061,5473,6045,8460,8798,9315,10087,10351,12907,13968,
#Partially deleted in new
chr2	96021945	96034915	chr2:96021945-96034915	0	-	96021945	96021945	8553170	21	330,56,66,121,132,78,149,259,71,119,83,123,213,100,672,129,105,74,114,69,63,	0,722,1012,1160,1363,1977,2243,2481,2827,3539,3984,4237,4751,5061,5473,8460,8798,9315,10087,10351,12907,
#Partially deleted in new
chr2	96021946	96034925	chr2:96021946-96034925	1	-	96022158	96032359	789624	21	329,56,66,121,132,78,149,241,71,119,83,123,100,134,100,129,105,74,114,69,73,	0,721,1011,1159,1362,1976,2242,2480,2826,3538,3983,4236,5060,5472,6044,8459,8797,9314,10086,10350,12906,
#Partially deleted in new
chr2	96022033	96034920	chr2:96022033-96034920	0	-	96022033	96022033	8553170	20	242,56,483,78,149,259,71,119,83,123,213,100,134,100,129,105,74,114,123,68,	0,634,924,1889,2155,2393,2739,3451,3896,4149,4663,4973,5385,5957,8372,8710,9227,9999,10263,12819,
#Partially deleted in new
chr2	96022034	96034927	chr2:96022034-96034927	0	-	96022034	96022034	8553170	20	241,56,66,121,132,78,149,259,831,83,123,213,100,672,129,105,74,114,123,75,	0,633,923,1071,1274,1888,2154,2392,2738,3895,4148,4662,4972,5384,8371,8709,9226,9998,10262,12818,
#Partially deleted in new
chr2	96022039	96030850	chr2:96022039-96030850	0	-	96022039	96022039	8553170	12	236,56,66,895,149,259,831,83,924,672,129,107,	0,628,918,1066,2149,2387,2733,3890,4143,5379,8366,8704,
#Deleted in new
chr2	96030410	96034918	chr2:96030410-96034918	0	-	96030410	96032359	789624	6	124,105,74,114,69,102,	0,333,850,1622,1886,4406,
#Deleted in new
chr2	96030787	96034920	chr2:96030787-96034920	0	-	96030787	96030787	8553170	5	133,74,114,123,104,	0,473,1245,1509,4029,
#Partially deleted in new
chr2	96034964	96039451	chr2:96034964-96039451	0	-	96034964	96034964	8553170	3	281,114,168,	0,887,4319,
#Deleted in new
chr2	96112874	96116245	chr2:96112874-96116245	3	-	96114796	96116149	0	1	3371,	0,
#Partially deleted in new
chr2	96123849	96138436	chr2:96123849-96138436	3	-	96123849	96138436	789624	9	422,155,82,182,118,94,62,126,55,	0,5974,6214,8690,9575,10115,11501,13725,14532,
#Partially deleted in new
chr2	96133683	96137777	chr2:96133683-96137777	0	-	96133683	96133683	8553170	3	375,62,203,	0,1667,3891,
#Deleted in new
chr2	96143165	96145440	chr2:96143165-96145440	3	-	96143822	96145354	0	4	872,220,122,474,	0,988,1595,1801,
#Deleted in new
chr2	96143728	96144617	chr2:96143728-96144617	0	-	96143728	96143728	8553170	2	309,464,	0,425,
#Deleted in new
chr2	96145601	96147012	chr2:96145601-96147012	3	-	96145601	96145601	8553170	2	55,142,	0,1269,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	96184858	96208818	chr2:96184858-96208818	3	-	96186729	96208434	789624	8	2056,85,100,83,111,50,209,674,	0,2358,7510,8219,8383,10099,10482,23286,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	96184866	96188117	chr2:96184866-96188117	0	-	96184866	96184866	8553170	2	2048,901,	0,2350,
#Partially deleted in new
chr2	96186749	96195514	chr2:96186749-96195514	0	-	96186749	96186749	8553170	7	165,85,100,128,51,50,174,	0,467,5619,6328,6552,8208,8591,
#Partially deleted in new
chr2	96193075	96208825	chr2:96193075-96208825	0	-	96193075	96195536	789624	5	85,111,50,209,287,	0,166,1882,2265,15463,
#Partially deleted in new
chr2	96193130	96195009	chr2:96193130-96195009	0	-	96193130	96193130	8553170	2	222,52,	0,1827,
#Partially deleted in new
chr2	96195202	96208181	chr2:96195202-96208181	0	-	96195202	96195202	8553170	2	347,37,	0,12942,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	96208415	96242594	chr2:96208415-96242594	3	+	96208415	96208415	8553170	3	564,245,718,	0,32028,33461,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	96239712	96242621	chr2:96239712-96242621	0	+	96239712	96239712	8553170	2	976,745,	0,2164,
#Deleted in new
chr2	96240238	96240752	chr2:96240238-96240752	0	+	96240238	96240238	8553170	1	514,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	96248515	96265994	chr2:96248515-96265994	3	-	96253807	96265381	789624	4	5600,165,375,126,	0,6317,16622,17353,
#Partially deleted in new
chr2	96251659	96265994	chr2:96251659-96265994	1	-	96253807	96265381	789624	4	2456,165,352,126,	0,3173,13478,14209,
#Partially deleted in new
chr2	96253799	96260595	chr2:96253799-96260595	1	-	96253807	96254989	789624	3	316,165,101,	0,1033,6695,
#Partially deleted in new
chr2	96266131	96271645	chr2:96266131-96271645	3	+	96266350	96271351	0	7	358,149,112,89,202,88,535,	0,1189,1493,1704,2325,3136,4979,
#Partially deleted in new
chr2	96266158	96267678	chr2:96266158-96267678	0	+	96266158	96266158	8553170	3	331,180,54,	0,1131,1466,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	96266240	96273349	chr2:96266240-96273349	0	+	96266240	96266240	8553170	5	249,112,89,899,2239,	0,1384,1595,2216,4870,
#Partially deleted in new
chr2	96266245	96267979	chr2:96266245-96267979	0	+	96266245	96266245	8553170	3	244,149,355,	0,1075,1379,
#Partially deleted in new
chr2	96274335	96305515	chr2:96274335-96305515	3	-	96275011	96305437	0	45	820,93,82,161,177,144,122,165,190,109,109,152,179,192,228,161,174,190,155,119,107,84,81,153,198,189,132,111,150,124,194,171,156,138,174,84,137,100,153,99,56,193,172,164,123,	0,921,2568,2745,3203,3471,3901,4211,4473,5115,7478,8865,9199,9477,10022,10844,11975,12352,12670,13103,13527,14327,14701,14891,15463,15990,16348,17056,17415,18636,18980,21152,22200,22597,23027,23301,23948,24267,24479,24993,26662,27188,28823,30369,31057,
#Partially deleted in new
chr2	96274730	96284723	chr2:96274730-96284723	0	-	96274730	96274730	8553170	15	425,93,82,161,177,144,122,165,190,109,109,152,179,192,366,	0,526,2173,2350,2808,3076,3506,3816,4078,4720,7083,8470,8804,9082,9627,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	96275016	96285376	chr2:96275016-96285376	0	-	96276691	96283977	789624	17	139,93,262,82,161,177,144,122,165,190,109,109,152,179,192,164,197,	0,240,1446,1887,2064,2522,2790,3220,3530,3792,4434,6797,8184,8518,8796,9341,10163,
#Deleted in new
chr2	96277533	96278359	chr2:96277533-96278359	0	-	96277533	96277533	8553170	2	417,123,	0,703,
#Deleted in new
chr2	96278677	96279807	chr2:96278677-96279807	0	-	96278677	96278677	8553170	3	34,190,357,	0,131,773,
#Partially deleted in new
chr2	96279186	96282025	chr2:96279186-96282025	0	-	96279186	96279186	8553170	2	373,212,	0,2627,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	96281184	96284874	chr2:96281184-96284874	0	-	96281184	96281184	8553170	3	2168,179,1062,	0,2350,2628,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	96284814	96289855	chr2:96284814-96289855	0	-	96284814	96284814	8553170	10	526,174,190,155,119,107,84,81,153,57,	0,1496,1873,2191,2624,3048,3848,4222,4412,4984,
#Partially deleted in new
chr2	96307262	96321731	chr2:96307262-96321731	3	-	96307262	96307262	8553170	2	144,596,	0,13873,
#Deleted in new
chr2	96325330	96327196	chr2:96325330-96327196	0	+	96326655	96327196	789624	2	235,555,	0,1311,
#Deleted in new
chr2	96325330	96328353	chr2:96325330-96328353	3	+	96326655	96328299	789624	2	235,1712,	0,1311,
#Deleted in new
chr2	96325407	96328326	chr2:96325407-96328326	1	+	96325839	96328299	789624	3	158,103,1685,	0,339,1234,
#Deleted in new
chr2	96326203	96328324	chr2:96326203-96328324	0	+	96326203	96328299	789624	2	105,1683,	0,438,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	96326222	96330517	chr2:96326222-96330517	1	+	96326607	96328299	789624	1	4295,	0,
#Partially deleted in new
chr2	96335786	96373845	chr2:96335786-96373845	3	+	96335829	96373351	789624	18	62,253,91,93,139,125,190,92,206,149,107,123,111,183,117,92,76,554,	0,5855,6263,6969,7379,8318,16044,17519,18396,23258,24356,24801,28694,30089,31470,33185,33638,37505,
#Partially deleted in new
chr2	96335795	96373707	chr2:96335795-96373707	1	+	96342800	96373351	789624	17	53,91,93,139,125,190,92,206,149,107,123,111,183,117,92,76,416,	0,6254,6960,7370,8309,16035,17510,18387,23249,24347,24792,28685,30080,31461,33176,33629,37496,
#Partially deleted in new
chr2	96335800	96366033	chr2:96335800-96366033	0	+	96335829	96366033	789624	14	48,220,91,93,139,125,190,92,206,149,107,123,111,158,	0,5874,6249,6955,7365,8304,16030,17505,18382,23244,24342,24787,28680,30075,
#Partially deleted in new
chr2	96335800	96359452	chr2:96335800-96359452	0	+	96335800	96335800	8553170	10	48,181,91,93,139,125,190,92,206,408,	0,5913,6249,6955,7365,8304,16030,17505,18382,23244,
#Partially deleted in new
chr2	96335806	96353402	chr2:96335806-96353402	0	+	96335829	96353402	789624	5	42,253,91,190,97,	0,5835,6243,16024,17499,
#Partially deleted in new
chr2	96335817	96373815	chr2:96335817-96373815	1	+	96341655	96373351	789624	18	31,503,91,93,139,125,190,92,206,149,107,123,111,183,117,92,76,524,	0,5574,6232,6938,7348,8287,16013,17488,18365,23227,24325,24770,28663,30058,31439,33154,33607,37474,
#Partially deleted in new
chr2	96364479	96373583	chr2:96364479-96373583	0	+	96364479	96373351	789624	6	112,90,117,92,76,292,	0,1489,2777,4492,4945,8812,
#Partially deleted in new
chr2	96497642	96505357	chr2:96497642-96505357	3	-	96498243	96505286	789624	4	804,72,486,99,	0,1735,2796,7616,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	96497645	96505345	chr2:96497645-96505345	1	-	96498256	96500478	789624	6	801,85,72,486,179,87,	0,1544,1732,2793,6885,7613,
#Partially deleted in new
chr2	96497645	96508109	chr2:96497645-96508109	1	-	96498243	96500478	789624	4	801,72,486,316,	0,1732,2793,10148,
#Partially deleted in new
chr2	96499982	96505357	chr2:96499982-96505357	0	-	96499982	96499982	8553170	2	942,99,	0,5276,
#Partially deleted in new
chr2	96527939	96532306	chr2:96527939-96532306	3	-	96527939	96527939	789624	3	244,116,80,	0,1794,4287,
#Partially deleted in new
chr2	96536742	96550285	chr2:96536742-96550285	0	+	96536742	96536742	8553170	4	88,116,139,533,	0,10659,12578,13010,
#Partially deleted in new
chr2	96536748	96552638	chr2:96536748-96552638	3	+	96536826	96552313	789624	7	82,116,139,53,98,160,1540,	0,10653,12572,13004,13439,13825,14350,
#Partially deleted in new
chr2	96536751	96552630	chr2:96536751-96552630	0	+	96536826	96550191	789624	6	79,116,53,98,160,1532,	0,10650,13001,13436,13822,14347,
#Partially deleted in new
chr2	96536766	96551165	chr2:96536766-96551165	0	+	96536766	96536766	8553170	5	64,116,533,160,67,	0,10635,12986,13807,14332,
#Partially deleted in new
chr2	96537344	96552634	chr2:96537344-96552634	1	+	96549404	96552313	789624	7	977,116,139,53,98,160,1536,	0,10057,11976,12408,12843,13229,13754,
#Partially deleted in new
chr2	96547389	96552634	chr2:96547389-96552634	0	+	96547389	96547389	8553170	4	128,533,160,1536,	0,2363,3184,3709,
#Partially deleted in new
chr2	96593169	96638346	chr2:96593169-96638346	0	-	96631539	96637135	789624	21	2462,134,223,110,131,85,192,157,201,64,158,75,72,102,117,132,186,91,232,265,64,	0,8473,8946,9583,11080,11609,12150,15338,15694,16329,17556,17894,19112,19292,19648,20318,26189,26502,38142,43751,45113,
#Partially deleted in new
chr2	96593171	96638309	chr2:96593171-96638309	3	-	96595610	96637135	789624	21	2460,134,223,110,131,85,192,157,201,64,158,75,72,102,117,132,186,91,171,265,27,	0,8471,8944,9581,11078,11607,12148,15336,15692,16327,17554,17892,19110,19290,19646,20316,26187,26500,38140,43749,45111,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr2	96593171	96631484	chr2:96593171-96631484	0	-	96628052	96631484	789624	22	2460,134,223,110,131,79,192,157,201,64,158,75,72,102,117,132,186,91,21,57,77,173,	0,8471,8944,9581,11078,11607,12148,15336,15692,16327,17554,17892,19110,19290,19646,20316,26187,26500,34750,34856,35400,38140,
#Partially deleted in new
chr2	96593171	96638020	chr2:96593171-96638020	0	-	96593171	96593171	789624	20	2460,134,110,131,85,192,157,201,64,158,75,72,102,117,132,53,186,171,265,72,	0,8471,9581,11078,11607,12148,15336,15692,16327,17554,17892,19110,19290,19646,20316,22320,26187,38140,43749,44777,
#Partially deleted in new
chr2	96593173	96638331	chr2:96593173-96638331	0	-	96601770	96637135	789624	21	2458,134,110,131,85,192,78,157,201,64,158,75,72,102,117,132,186,91,171,265,49,	0,8469,9579,11076,11605,12146,13796,15334,15690,16325,17552,17890,19108,19288,19644,20314,26185,26498,38138,43747,45109,
#Partially deleted in new
chr2	96595158	96598153	chr2:96595158-96598153	0	-	96595158	96595158	8553170	2	473,73,	0,2922,
#Partially deleted in new
chr2	96595462	96601911	chr2:96595462-96601911	0	-	96595462	96595462	8553170	2	169,269,	0,6180,
#Partially deleted in new
chr2	96595511	96638320	chr2:96595511-96638320	0	-	96619465	96637135	789624	21	120,134,223,110,131,85,192,78,157,201,64,158,75,72,102,117,132,186,171,265,38,	0,6131,6604,7241,8738,9267,9808,11458,12996,13352,13987,15214,15552,16770,16950,17306,17976,23847,35800,41409,42771,
#Partially deleted in new
chr2	96595585	96638378	chr2:96595585-96638378	0	-	96619465	96637135	789624	20	46,134,223,110,131,85,192,157,201,64,158,75,72,102,117,132,186,171,265,96,	0,6057,6530,7167,8664,9193,9734,12922,13278,13913,15140,15478,16696,16876,17232,17902,23773,35726,41335,42697,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	96603299	96606834	chr2:96603299-96606834	0	-	96603299	96603299	8553170	3	1081,79,1515,	0,1479,2020,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	96610341	96612535	chr2:96610341-96612535	0	-	96610341	96610341	8553170	4	542,75,72,74,	0,722,1940,2120,
#Partially deleted in new
chr2	96610725	96637228	chr2:96610725-96637228	0	-	96631539	96637135	789624	11	158,75,72,102,117,132,53,186,91,232,308,	0,338,1556,1736,2092,2762,4766,8633,8946,20586,26195,
#Partially deleted in new
chr2	96610725	96638331	chr2:96610725-96638331	0	-	96634162	96637135	789624	12	158,75,72,102,117,132,186,91,171,30,265,49,	0,338,1556,1736,2092,2762,8633,8946,20586,23423,26195,27557,
#Partially deleted in new
chr2	96612231	96638324	chr2:96612231-96638324	0	-	96612231	96619403	789624	6	122,102,117,132,186,42,	0,230,586,1256,7127,26051,
#Partially deleted in new
chr2	96612816	96637192	chr2:96612816-96637192	0	-	96613606	96637135	789624	4	118,132,171,272,	0,671,18495,24104,
#Partially deleted in new
chr2	96612871	96638374	chr2:96612871-96638374	0	-	96613606	96637135	789624	4	63,132,265,92,	0,616,24049,25411,
#Partially deleted in new
chr2	96612874	96642787	chr2:96612874-96642787	0	-	96619465	96631436	789624	5	60,132,186,171,45,	0,613,6484,18437,29868,
#Partially deleted in new
chr2	96631337	96638060	chr2:96631337-96638060	0	-	96631337	96631337	8553170	3	206,265,112,	0,5583,6611,
#Deleted in new
chr2	96636738	96638378	chr2:96636738-96638378	0	-	96636738	96636738	8553170	2	447,96,	0,1544,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	96642736	96654898	chr2:96642736-96654898	0	+	96642736	96642736	8553170	6	185,53,109,55,110,3007,	0,3664,5041,6886,7443,9155,
#Partially deleted in new
chr2	96642836	96704692	chr2:96642836-96704692	0	+	96642836	96689217	789624	52	85,53,92,109,55,110,129,63,31,116,124,53,69,44,83,95,129,178,125,101,178,141,139,164,115,103,164,168,139,78,182,162,272,153,163,26,51,102,120,162,92,171,149,140,89,96,142,100,194,110,148,225,	0,3564,4227,4941,6786,7343,9055,10803,17504,18488,18831,19378,20602,25914,26049,26206,27282,30240,41490,42492,43103,43358,44979,46376,46807,47650,48353,48608,48988,49267,50669,51074,51523,52672,52905,53215,54689,54823,55200,55834,56208,56713,57095,57495,59118,59469,59763,60141,60316,60686,61378,61631,
#Partially deleted in new
chr2	96642836	96704887	chr2:96642836-96704887	1	+	96642836	96704692	789624	52	85,53,92,109,55,110,129,63,31,116,124,53,69,44,119,95,129,178,125,101,178,156,132,164,115,97,164,168,241,78,182,162,105,153,163,26,51,102,120,162,92,171,149,140,89,123,142,100,194,110,148,420,	0,3564,4227,4941,6786,7343,9055,10803,17504,18488,18831,19378,20602,25914,26049,26206,27282,30240,41490,42492,43103,43358,44979,46376,46807,47650,48353,48608,48886,49267,50669,51074,51523,52672,52905,53215,54689,54823,55200,55834,56208,56713,57095,57495,59118,59442,59763,60141,60316,60686,61378,61631,
#Partially deleted in new
chr2	96642836	96704887	chr2:96642836-96704887	1	+	96663450	96704692	789624	55	85,53,92,109,55,110,129,63,31,116,124,53,69,44,119,95,129,178,125,101,178,127,14,136,2,164,115,103,164,168,139,78,182,162,272,1,153,163,26,51,102,120,162,92,171,149,140,89,96,142,100,194,110,148,420,	0,3564,4227,4941,6786,7343,9055,10803,17504,18488,18831,19378,20602,25914,26049,26206,27282,30240,41490,42492,43103,43358,44885,44979,46128,46376,46807,47650,48353,48608,48988,49267,50669,51074,51523,52460,52672,52905,53215,54689,54823,55200,55834,56208,56713,57095,57495,59118,59469,59763,60141,60316,60686,61378,61631,
#Partially deleted in new
chr2	96642836	96704885	chr2:96642836-96704885	3	+	96642836	96704692	789624	53	85,53,92,109,55,110,129,63,51,31,116,124,53,69,44,83,95,129,178,125,101,178,156,132,164,115,103,164,168,139,78,182,162,105,153,163,26,51,102,120,162,92,171,149,140,89,96,142,100,194,110,148,418,	0,3564,4227,4941,6786,7343,9055,10803,11609,17504,18488,18831,19378,20602,25914,26049,26206,27282,30240,41490,42492,43103,43358,44979,46376,46807,47650,48353,48608,48988,49267,50669,51074,51523,52672,52905,53215,54689,54823,55200,55834,56208,56713,57095,57495,59118,59469,59763,60141,60316,60686,61378,61631,
#Partially deleted in new
chr2	96642836	96704692	chr2:96642836-96704692	1	+	96642836	96704692	789624	53	85,53,92,109,55,110,135,63,31,116,123,3,60,69,44,83,95,129,178,125,101,178,141,138,164,115,103,164,168,139,78,182,162,273,153,163,26,51,102,120,162,92,168,149,140,89,96,142,100,194,110,148,225,	0,3564,4227,4941,6786,7343,9055,10803,17504,18488,18831,18959,19371,20602,25914,26049,26206,27282,30240,41490,42492,43103,43358,44979,46376,46807,47650,48353,48608,48988,49267,50669,51074,51523,52672,52905,53215,54689,54823,55200,55834,56208,56716,57095,57495,59118,59469,59763,60141,60316,60686,61378,61631,
#Partially deleted in new
chr2	96670217	96704885	chr2:96670217-96704885	0	+	96670217	96670217	8553170	35	30,178,125,101,178,69,139,164,115,103,164,168,139,78,182,162,1302,163,26,51,102,120,162,92,171,149,140,89,96,142,100,194,110,148,418,	0,2859,14109,15111,15722,15977,17598,18995,19426,20269,20972,21227,21607,21886,23288,23693,24142,25524,25834,27308,27442,27819,28453,28827,29332,29714,30114,31737,32088,32382,32760,32935,33305,33997,34250,
#Partially deleted in new
chr2	96705928	96740063	chr2:96705928-96740063	3	-	96707255	96740040	789624	8	1470,120,115,162,83,118,119,210,	0,1785,5727,5935,27590,28480,32020,33925,
#Partially deleted in new
chr2	96705974	96740041	chr2:96705974-96740041	0	-	96737199	96740040	789624	9	1424,120,115,162,83,118,81,119,188,	0,1739,5681,5889,27544,28434,31162,31974,33879,
#Partially deleted in new
chr2	96706339	96740064	chr2:96706339-96740064	1	-	96707255	96740040	789624	9	1059,120,115,162,33,83,118,119,211,	0,1374,5316,5524,6767,27179,28069,31609,33514,
#Partially deleted in new
chr2	96706876	96740064	chr2:96706876-96740064	0	-	96711972	96740040	789624	8	522,120,115,162,33,118,119,211,	0,837,4779,4987,6230,27532,31072,32977,
#Partially deleted in new
chr2	96707043	96740063	chr2:96707043-96740063	0	-	96733534	96740040	789624	7	355,120,115,162,83,118,210,	0,670,4612,4820,26475,27365,32810,
#Partially deleted in new
chr2	96707116	96740064	chr2:96707116-96740064	0	-	96711994	96740040	789624	6	282,120,115,162,118,211,	0,597,4539,4747,27292,32737,
#Partially deleted in new
chr2	96707179	96740064	chr2:96707179-96740064	0	-	96733534	96740040	789624	8	219,120,115,162,33,83,118,211,	0,534,4476,4684,5927,26339,27229,32674,
#Partially deleted in new
chr2	96707677	96711914	chr2:96707677-96711914	0	-	96707677	96707677	8553170	3	156,115,51,	0,3978,4186,
#Partially deleted in new
chr2	96711725	96734687	chr2:96711725-96734687	0	-	96711725	96711725	8553170	4	45,162,83,279,	0,138,21793,22683,
#Partially deleted in new
chr2	96760901	96811891	chr2:96760901-96811891	3	+	96760999	96809517	0	7	1500,144,135,170,97,182,2572,	0,36110,36611,38155,38650,47659,48418,
#Partially deleted in new
chr2	96788589	96797610	chr2:96788589-96797610	0	+	96788589	96788589	8553170	3	305,144,98,	0,8422,8923,
#Partially deleted in new
chr2	96788589	96808686	chr2:96788589-96808686	0	+	96788589	96788589	8553170	6	76,144,135,170,97,126,	0,8422,8923,10467,10962,19971,
#Partially deleted in new
chr2	96788618	96799184	chr2:96788618-96799184	0	+	96788618	96788618	8553170	4	182,144,135,128,	0,8393,8894,10438,
#Deleted in new
chr2	96798277	96798353	chr2:96798277-96798353	3	+	96798277	96798277	5263520	1	76,	0,
#Deleted in new
chr2	96812238	96813657	chr2:96812238-96813657	3	-	96812238	96812238	789624	2	251,164,	0,1255,
#Partially deleted in new
chr2	96816244	96833911	chr2:96816244-96833911	1	+	96816277	96832616	0	7	1258,150,170,97,134,139,1360,	0,10588,11486,11854,12322,12751,16307,
#Partially deleted in new
chr2	96816249	96833911	chr2:96816249-96833911	3	+	96816277	96832616	0	8	1253,144,150,170,97,134,139,1360,	0,8808,10583,11481,11849,12317,12746,16302,
#Partially deleted in new
chr2	96824525	96842117	chr2:96824525-96842117	0	-	96824525	96824525	8553170	8	334,127,230,99,99,99,86,58,	0,7987,8785,15471,15706,15890,16301,17534,
#Partially deleted in new
chr2	96825174	96833577	chr2:96825174-96833577	0	+	96825174	96825174	8553170	4	27,150,1404,1026,	0,1658,2556,7377,
#Partially deleted in new
chr2	96826832	96827980	chr2:96826832-96827980	0	+	96826832	96826832	8553170	2	150,250,	0,898,
#Partially deleted in new
chr2	96828565	96832573	chr2:96828565-96832573	0	+	96828565	96828565	8553170	4	135,139,100,22,	0,430,3403,3986,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	96836610	96858014	chr2:96836610-96858014	0	-	96848300	96857987	789624	9	3485,99,497,126,147,176,204,104,127,	0,3621,3805,5449,5754,11658,16790,17727,21277,
#Partially deleted in new
chr2	96837911	96844034	chr2:96837911-96844034	3	-	96839548	96843992	789624	9	1733,99,99,99,99,126,126,147,69,	0,1815,2085,2320,2504,2875,4148,4453,6054,
#Partially deleted in new
chr2	96837913	96844005	chr2:96837913-96844005	1	-	96839548	96843992	789624	10	175,1146,99,99,99,99,126,126,147,40,	0,585,1813,2083,2318,2502,2873,4146,4451,6052,
#Partially deleted in new
chr2	96837914	96844021	chr2:96837914-96844021	1	-	96839548	96843992	789624	8	1730,99,99,99,99,126,147,56,	0,1812,2082,2317,2501,4145,4450,6051,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	96838731	96841242	chr2:96838731-96841242	0	-	96838731	96838731	8553170	5	913,102,99,99,827,	0,995,1265,1500,1684,
#Partially deleted in new
chr2	96840058	96857934	chr2:96840058-96857934	0	-	96840058	96840058	8553170	8	37,99,99,126,126,147,176,47,	0,173,357,728,2001,2306,8210,17829,
#Partially deleted in new
chr2	96847984	96858095	chr2:96847984-96858095	3	-	96848300	96857987	789624	4	460,204,104,208,	0,5416,6353,9903,
#Partially deleted in new
chr2	96859715	96869971	chr2:96859715-96869971	3	-	96860625	96867886	789624	15	1740,71,158,113,223,145,176,152,117,97,99,63,149,146,96,	0,1863,2021,3966,4210,4522,4989,5248,5488,5725,5950,6151,6567,8062,10160,
#Deleted in new
chr2	96859735	96862447	chr2:96859735-96862447	0	-	96859735	96859735	8553170	2	1914,711,	0,2001,
#Partially deleted in new
chr2	96859741	96866930	chr2:96859741-96866930	0	-	96859741	96859741	8553170	13	1714,71,158,113,223,145,176,152,117,97,99,63,648,	0,1837,1995,3940,4184,4496,4963,5222,5462,5699,5924,6125,6541,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	96859747	96863328	chr2:96859747-96863328	0	-	96859747	96859747	8553170	3	1708,71,1592,	0,1831,1989,
#Deleted in new
chr2	96865233	96868588	chr2:96865233-96868588	0	-	96865233	96867886	789624	7	87,97,99,63,149,149,173,	0,207,432,633,1049,2544,3182,
#Deleted in new
chr2	96865666	96870757	chr2:96865666-96870757	0	-	96865666	96867886	789624	5	98,63,149,149,380,	0,200,616,2111,4711,
#Partially deleted in new
chr2	96875881	96898133	chr2:96875881-96898133	1	-	96876275	96894021	789624	5	427,153,78,126,220,	0,2008,2534,18044,22032,
#Partially deleted in new
chr2	96875884	96986592	chr2:96875884-96986592	3	-	96876275	96986313	789624	17	424,153,78,126,88,98,177,94,115,85,106,153,108,62,422,69,352,	0,2005,2531,18041,26735,45280,45593,47605,53321,71933,75494,84403,91635,94831,96016,96653,110356,
#Partially deleted in new
chr2	96876025	96895142	chr2:96876025-96895142	0	-	96876025	96876025	8553170	5	283,153,78,126,82,	0,1864,2390,17900,19035,
#Partially deleted in new
chr2	96877756	96895162	chr2:96877756-96895162	0	-	96877756	96877756	8553170	4	286,78,126,102,	0,659,16169,17304,
#Partially deleted in new
chr2	96921530	96950109	chr2:96921530-96950109	0	-	96921530	96921530	8553170	5	124,94,115,85,124,	0,1959,7675,26287,28455,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	96923568	96951935	chr2:96923568-96951935	0	-	96923568	96923568	8553170	5	15,115,85,106,253,	0,5637,24249,27810,28114,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	96956707	96956815	chr2:96956707-96956815	7	-	96956707	96956707	16724991	1	108,	0,
#Partially deleted in new
chr2	97000435	97001593	chr2:97000435-97001593	7	-	97000435	97000435	16724991	2	179,305,	0,853,
#Deleted in new
chr2	97008367	97009104	chr2:97008367-97009104	7	-	97008367	97008367	16724991	1	737,	0,
#Deleted in new
chr2	97018342	97018604	chr2:97018342-97018604	7	-	97018342	97018342	16724991	1	262,	0,
#Partially deleted in new
chr2	97025980	97031636	chr2:97025980-97031636	7	-	97025980	97025980	16724991	5	478,106,232,103,109,	0,1578,3231,4527,5547,
#Deleted in new
chr2	97034441	97034706	chr2:97034441-97034706	7	+	97034441	97034441	16724991	1	265,	0,
#Deleted in new
chr2	97035460	97037549	chr2:97035460-97037549	7	-	97035460	97035460	16724991	3	238,79,376,	0,1008,1713,
#Deleted in new
chr2	97046587	97046891	chr2:97046587-97046891	7	+	97046587	97046587	16724991	1	304,	0,
#Deleted in new
chr2	97050728	97051028	chr2:97050728-97051028	7	+	97050728	97050728	16724991	1	300,	0,
#Partially deleted in new
chr2	97060127	97060415	chr2:97060127-97060415	7	+	97060127	97060127	16724991	1	288,	0,
#Partially deleted in new
chr2	97081097	97083249	chr2:97081097-97083249	7	+	97081097	97081097	16724991	5	148,76,472,58,109,	0,339,894,1602,2043,
#Partially deleted in new
chr2	97083582	97094882	chr2:97083582-97094882	3	-	97083754	97091706	789624	8	235,88,109,163,60,217,251,182,	0,365,586,2116,2556,6526,7879,11118,
#Partially deleted in new
chr2	97083582	97094839	chr2:97083582-97094839	1	-	97083754	97091706	789624	9	235,88,109,163,60,217,251,126,139,	0,365,586,2116,2556,6526,7879,8280,11118,
#Partially deleted in new
chr2	97083889	97094820	chr2:97083889-97094820	0	-	97083889	97083889	8553170	2	388,120,	0,10811,
#Partially deleted in new
chr2	97083929	97094873	chr2:97083929-97094873	0	-	97083929	97083929	8553170	5	106,109,500,217,173,	0,239,1769,6179,10771,
#Partially deleted in new
chr2	97086547	97094848	chr2:97086547-97094848	0	-	97086547	97086547	8553170	3	410,217,148,	0,3561,8153,
#Partially deleted in new
chr2	97089755	97094835	chr2:97089755-97094835	0	-	97089755	97089755	8553170	3	570,251,135,	0,1706,4945,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	97094934	97097433	chr2:97094934-97097433	3	+	97094934	97094934	8553170	1	2499,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	97100586	97100874	chr2:97100586-97100874	3	+	97100586	97100586	8553170	1	288,	0,
#Partially deleted in new
chr2	97113495	97250199	chr2:97113495-97250199	1	+	97113739	97250167	789624	75	441,115,174,107,138,68,29,73,29,73,31,67,61,31,67,61,68,40,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,74,142,214,184,915,153,71,94,56,	0,4568,4848,9391,10964,13571,29144,29267,31022,31144,32990,35799,38383,39008,41179,44611,45092,48603,50787,50901,54081,54199,66242,66365,68102,68225,69963,70086,71820,71942,73702,73833,75591,75722,77482,77613,79362,79485,81230,81349,83097,83220,84967,85090,86838,86957,88706,88825,90572,90695,92444,92567,94315,94438,96185,96304,98050,98173,99923,100046,101805,101929,103681,103804,105554,105678,111310,120234,127770,130350,131661,133980,135648,136056,136648,
#Partially deleted in new
chr2	97113551	97118829	chr2:97113551-97118829	0	+	97113551	97113551	8553170	3	385,115,486,	0,4512,4792,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	97113656	97200363	chr2:97113656-97200363	1	+	97113739	97163348	789624	16	280,115,174,107,138,68,26,611,29,29,73,29,73,29,73,30,	0,4407,4687,9230,10803,13410,28983,49587,50626,53920,54038,66081,83059,84806,84929,86677,
#Partially deleted in new
chr2	97113739	97250167	chr2:97113739-97250167	3	+	97113739	97250167	789624	75	197,115,174,107,138,68,29,73,29,73,31,67,61,31,67,61,68,40,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,151,29,73,29,73,74,142,214,184,915,153,71,94,24,	0,4324,4604,9147,10720,13327,28900,29023,30778,30900,32746,35555,38139,38764,40935,44367,44848,48359,50543,50657,53837,53955,65998,66121,67858,67981,69719,69842,71576,71698,73458,73589,75347,75478,77238,77369,79118,79241,80986,81105,82853,82976,84723,84846,86594,86713,88462,88581,90328,90451,92200,92323,94071,94194,95941,96060,97806,97929,99679,99802,101561,101685,103437,103560,105310,105434,111066,119990,127526,130106,131417,133736,135404,135812,136404,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	97212726	97249050	chr2:97212726-97249050	0	+	97212726	97212726	8553170	14	721,73,29,73,29,73,29,73,71,142,214,184,915,1575,	0,815,2574,2698,4450,4573,6323,6447,12082,21003,28539,31119,32430,34749,
#Partially deleted in new
chr2	97245599	97250178	chr2:97245599-97250178	0	+	97245599	97245599	8553170	4	472,153,502,35,	0,1876,3544,4544,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	97281903	97291780	chr2:97281903-97291780	3	+	97281903	97281903	8553170	5	181,117,85,130,241,	0,2140,2797,2974,9636,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	97282491	97291724	chr2:97282491-97291724	1	+	97282491	97282491	8553170	4	2294,130,221,185,	0,2386,2811,9048,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	97283901	97291721	chr2:97283901-97291721	0	+	97283901	97283901	8553170	3	263,85,182,	0,799,7638,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	97283980	97291632	chr2:97283980-97291632	0	+	97283980	97283980	8553170	3	184,96,93,	0,709,7559,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	97284432	97291780	chr2:97284432-97291780	0	+	97284432	97284432	8553170	3	353,130,241,	0,445,7107,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	97284973	97291721	chr2:97284973-97291721	1	+	97284973	97284973	8553170	4	34,80,59,182,	0,329,491,6566,
#Partially deleted in new
chr2	97301728	97304151	chr2:97301728-97304151	3	+	97301728	97301728	8553170	2	303,252,	0,2171,
#Deleted in new
chr2	97322136	97322423	chr2:97322136-97322423	7	-	97322136	97322136	16724991	1	287,	0,
#Deleted in new
chr2	97331532	97331843	chr2:97331532-97331843	7	-	97331532	97331532	16724991	1	311,	0,
#Deleted in new
chr2	97335670	97335974	chr2:97335670-97335974	7	-	97335670	97335670	16724991	1	304,	0,
#Deleted in new
chr2	97348898	97349179	chr2:97348898-97349179	7	+	97348898	97348898	16724991	1	281,	0,
#Deleted in new
chr2	97355058	97355335	chr2:97355058-97355335	7	+	97355058	97355058	16724991	1	277,	0,
#Deleted in new
chr2	97372531	97372835	chr2:97372531-97372835	7	+	97372531	97372531	16724991	1	304,	0,
#Deleted in new
chr2	97376673	97376973	chr2:97376673-97376973	7	+	97376673	97376673	16724991	1	300,	0,
#Deleted in new
chr2	97386081	97386368	chr2:97386081-97386368	7	+	97386081	97386081	16724991	1	287,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	97416164	97426058	chr2:97416164-97426058	1	-	97416164	97416164	8553170	5	241,130,85,117,181,	0,6790,7012,7637,9713,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	97416164	97423529	chr2:97416164-97423529	0	-	97416164	97416164	8553170	3	241,130,353,	0,6790,7012,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	97416220	97423903	chr2:97416220-97423903	1	-	97416220	97416220	8553170	5	185,218,49,96,106,	0,6218,6815,6956,7577,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	97416220	97425470	chr2:97416220-97425470	1	-	97416220	97416220	8553170	4	185,221,130,2294,	0,6218,6734,6956,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	97416223	97424069	chr2:97416223-97424069	0	-	97416223	97416223	8553170	3	182,85,272,	0,6953,7574,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	97416223	97422988	chr2:97416223-97422988	0	-	97416223	97416223	8553170	4	182,59,80,34,	0,6215,6356,6731,
#Partially deleted in new
chr2	97421074	97434847	chr2:97421074-97434847	3	+	97421074	97421074	8553170	3	174,261,186,	0,1885,13587,
#Deleted in new
chr2	97421177	97422749	chr2:97421177-97422749	0	+	97421177	97421177	8553170	2	71,585,	0,987,
#Deleted in new
chr2	97422164	97423309	chr2:97422164-97423309	1	+	97422164	97422164	8553170	2	438,350,	0,795,
#Deleted in new
chr2	97422164	97423388	chr2:97422164-97423388	1	-	97422164	97422164	8553170	3	495,130,212,	0,790,1012,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	97422438	97426003	chr2:97422438-97426003	0	-	97422438	97422438	8553170	4	218,130,96,126,	0,516,738,3439,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	97422438	97426617	chr2:97422438-97426617	1	-	97422438	97422438	8553170	5	59,80,130,96,740,	0,141,516,738,3439,
#Deleted in new
chr2	97422495	97423256	chr2:97422495-97423256	0	-	97422495	97422495	8553170	2	589,80,	0,681,
#Partially deleted in new
chr2	97422556	97433390	chr2:97422556-97433390	2	-	97422556	97422556	8553170	5	103,130,96,117,91,	0,398,620,1245,10743,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	97422954	97426072	chr2:97422954-97426072	0	-	97422954	97422954	8553170	4	130,96,130,195,	0,222,834,2923,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	97422954	97433527	chr2:97422954-97433527	0	-	97422954	97422954	8553170	5	130,85,117,111,228,	0,222,847,1340,10345,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	97422954	97426205	chr2:97422954-97426205	0	-	97422954	97422954	8553170	3	130,85,328,	0,222,2923,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	97422954	97433487	chr2:97422954-97433487	0	-	97422954	97422954	8553170	4	130,96,285,188,	0,222,3888,10345,
#Deleted in new
chr2	97423058	97424201	chr2:97423058-97424201	0	-	97423058	97423058	8553170	3	26,96,400,	0,118,743,
#Partially deleted in new
chr2	97492662	97589721	chr2:97492662-97589721	3	-	97507041	97589685	789624	44	193,30,94,71,153,915,184,214,142,74,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,68,138,107,174,115,197,	0,14373,14901,15332,16918,18475,20517,23069,30663,39648,43637,43805,45505,45672,47371,47538,49248,49416,51127,51294,53003,53170,54873,55040,56756,56923,58626,58789,60505,60680,62397,62563,64274,64441,66136,66303,68002,68169,83716,86243,87799,92281,92621,96862,
#Partially deleted in new
chr2	97492665	97511609	chr2:97492665-97511609	0	-	97492665	97492665	8553170	5	190,30,502,153,472,	0,14370,14898,16915,18472,
#Partially deleted in new
chr2	97492666	97511249	chr2:97492666-97511249	1	-	97507041	97511209	789624	6	189,30,94,71,153,112,	0,14369,14897,15328,16914,18471,
#Boundary problem: need 44, got 0, diff 44, mapped 0.0
chr2	97504797	97589965	chr2:97504797-97589965	1	-	97507041	97589685	789624	44	1638,30,94,71,153,915,184,214,142,74,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,68,138,107,174,115,441,	0,2238,2766,3197,4783,6340,8382,10934,18528,27513,31502,31670,33370,33537,35236,35403,37113,37281,38992,39159,40868,41035,42738,42905,44621,44788,46491,46654,48370,48545,50262,50428,52139,52306,54001,54168,55867,56034,71581,74108,75664,80146,80486,84727,
#Boundary problem: need 45, got 0, diff 45, mapped 0.0
chr2	97504797	97589965	chr2:97504797-97589965	1	-	97507041	97556961	789624	45	1638,30,94,71,153,915,184,214,142,74,73,29,73,29,4,150,29,73,29,73,29,26,76,73,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,68,138,107,174,115,441,	0,2238,2766,3197,4783,6340,8382,10934,18528,27513,31502,31670,33370,33537,34924,37036,37281,38992,39159,40868,41035,42410,42628,42738,42905,44621,44788,46491,46654,48370,48545,50262,50428,52139,52306,54001,54168,55867,56034,71581,74108,75664,80146,80486,84727,
#Partially deleted in new
chr2	97506963	97507719	chr2:97506963-97507719	0	-	97506963	97506963	8553170	2	102,156,	0,600,
#Deleted in new
chr2	97523948	97524976	chr2:97523948-97524976	7	-	97523948	97523948	16724991	1	1028,	0,
#Partially deleted in new
chr2	97547564	97589864	chr2:97547564-97589864	0	-	97560835	97589685	789624	21	44,29,73,29,73,29,73,29,73,29,73,29,73,29,73,29,138,107,174,115,340,	0,138,1854,2021,3724,3887,5603,5778,7495,7661,9372,9539,11234,11401,13100,13267,31341,32897,37379,37719,41960,
#Partially deleted in new
chr2	97551311	97589815	chr2:97551311-97589815	0	-	97560700	97589685	789624	15	50,29,73,29,73,29,73,29,73,29,73,29,174,115,291,	0,140,1856,2031,3748,3914,5625,5792,7487,7654,9353,9520,33632,33972,38213,
#Deleted in new
chr2	97636779	97637803	chr2:97636779-97637803	7	-	97636779	97636779	16724991	1	1024,	0,
#Partially deleted in new
chr2	97646039	97648383	chr2:97646039-97648383	3	+	97646086	97648108	789624	4	150,74,100,388,	0,1027,1304,1956,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	97646096	97648191	chr2:97646096-97648191	0	+	97646096	97646096	8553170	5	93,150,74,100,196,	0,420,970,1247,1899,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	97646288	97648179	chr2:97646288-97648179	0	+	97646288	97646288	8553170	5	103,150,74,100,184,	0,228,778,1055,1707,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	97646440	97647381	chr2:97646440-97647381	0	+	97646440	97646440	8553170	2	700,38,	0,903,
#Partially deleted in new
chr2	97655962	97664107	chr2:97655962-97664107	3	-	97656857	97663890	789624	11	998,41,62,175,93,217,125,126,76,65,265,	0,1189,1485,1980,2261,2464,2916,3389,4608,5919,7880,
#Partially deleted in new
chr2	97657977	97663916	chr2:97657977-97663916	0	-	97657977	97657977	8553170	7	140,93,577,126,76,65,74,	0,246,449,1374,2593,3904,5865,
#Partially deleted in new
chr2	97658813	97659891	chr2:97658813-97659891	0	-	97658813	97658813	8553170	2	190,540,	0,538,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	97664216	97675721	chr2:97664216-97675721	0	+	97664216	97664216	8553170	4	256,138,102,91,	0,1586,10239,11414,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	97664238	97671560	chr2:97664238-97671560	0	+	97664238	97664238	8553170	4	234,151,116,230,	0,2665,6351,7092,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	97664238	97671512	chr2:97664238-97671512	0	+	97664238	97664238	8553170	3	234,151,923,	0,2665,6351,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	97664246	97671374	chr2:97664246-97671374	0	+	97664246	97664246	8553170	3	226,145,402,	0,5443,6726,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	97664246	97671729	chr2:97664246-97671729	0	+	97664246	97664246	8553170	5	226,151,110,100,399,	0,2657,3717,6343,7084,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	97664260	97671729	chr2:97664260-97671729	0	+	97664260	97664260	8553170	5	212,151,100,174,399,	0,2643,6329,6712,7070,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	97664260	97671706	chr2:97664260-97671706	0	+	97664260	97664260	8553170	3	212,138,376,	0,1542,7070,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	97664271	97671706	chr2:97664271-97671706	0	+	97664271	97664271	8553170	3	201,145,376,	0,5418,7059,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	97664590	97664731	chr2:97664590-97664731	3	-	97664590	97664590	8553170	1	141,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	97665802	97671363	chr2:97665802-97671363	0	+	97665802	97665802	8553170	2	138,391,	0,5170,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	97666956	97671706	chr2:97666956-97671706	0	+	97666956	97666956	8553170	3	98,100,734,	0,3633,4016,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	97668090	97671729	chr2:97668090-97671729	0	+	97668090	97668090	8553170	3	537,100,399,	0,2499,3240,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	97668647	97671702	chr2:97668647-97671702	0	+	97668647	97668647	8553170	3	475,100,372,	0,1942,2683,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	97669179	97671706	chr2:97669179-97671706	0	+	97669179	97669179	8553170	2	655,376,	0,2151,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	97669685	97671729	chr2:97669685-97671729	0	+	97669685	97669685	8553170	3	149,100,399,	0,904,1645,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	97669712	97671729	chr2:97669712-97671729	0	+	97669712	97669712	8553170	4	122,140,113,329,	0,853,1481,1688,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	97669742	97671788	chr2:97669742-97671788	0	+	97669742	97669742	8553170	2	92,458,	0,1588,
#Partially deleted in new
chr2	97669742	97703024	chr2:97669742-97703024	1	+	97669788	97702801	789624	7	92,84,99,72,111,151,356,	0,6102,19152,20513,29283,31411,32926,
#Partially deleted in new
chr2	97669742	97703024	chr2:97669742-97703024	1	+	97669788	97702801	789624	8	92,102,84,99,72,111,151,356,	0,4713,6102,19152,20513,29283,31411,32926,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	97669745	97703056	chr2:97669745-97703056	2	+	97669745	97669745	789624	10	89,169,102,91,84,99,72,111,151,388,	0,1585,4710,5885,6099,19149,20510,29280,31408,32923,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	97669775	97702704	chr2:97669775-97702704	0	+	97669788	97671270	789624	9	59,116,102,84,99,72,111,151,36,	0,1415,4680,6069,19119,20480,29250,31378,32893,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	97669792	97702815	chr2:97669792-97702815	0	+	97669792	97669792	8553170	7	42,169,84,99,72,111,147,	0,1538,6052,19102,20463,29233,32876,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	97669792	97702818	chr2:97669792-97702818	0	+	97671475	97675868	789624	7	42,169,102,84,99,111,150,	0,1538,4663,6052,19102,29233,32876,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	97669792	97702725	chr2:97669792-97702725	0	+	97671475	97675639	789624	9	42,169,102,91,84,99,72,111,57,	0,1538,4663,5838,6052,19102,20463,29233,32876,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	97669792	97688993	chr2:97669792-97688993	0	+	97669792	97669792	8553170	6	42,244,102,91,84,99,	0,1538,4663,5838,6052,19102,
#Partially deleted in new
chr2	97669792	97703054	chr2:97669792-97703054	0	+	97669792	97702801	789624	4	42,111,151,386,	0,29233,31361,32876,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	97669792	97688940	chr2:97669792-97688940	0	+	97669792	97669792	8553170	7	42,100,244,102,91,84,46,	0,797,1538,4663,5838,6052,19102,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	97669792	97699114	chr2:97669792-97699114	0	+	97669792	97669792	8553170	8	42,87,102,91,84,99,72,89,	0,1427,4663,5838,6052,19102,20463,29233,
#Partially deleted in new
chr2	97669792	97703060	chr2:97669792-97703060	0	+	97669792	97702706	789624	4	42,84,111,392,	0,6052,29233,32876,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	97669792	97701297	chr2:97669792-97701297	0	+	97669792	97671270	789624	7	42,113,84,99,72,111,144,	0,1401,6052,19102,20463,29233,31361,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	97669792	97699136	chr2:97669792-97699136	0	+	97669792	97669792	8553170	7	42,113,102,84,99,72,111,	0,1401,4663,6052,19102,20463,29233,
#Partially deleted in new
chr2	97669792	97702961	chr2:97669792-97702961	0	+	97669792	97702706	789624	6	42,84,99,72,111,293,	0,6052,19102,20463,29233,32876,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	97669792	97701211	chr2:97669792-97701211	0	+	97669792	97669792	8553170	8	42,169,102,84,99,72,111,58,	0,1538,4663,6052,19102,20463,29233,31361,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	97669792	97701211	chr2:97669792-97701211	0	+	97669792	97669792	8553170	7	42,244,102,84,72,111,58,	0,1538,4663,6052,20463,29233,31361,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	97669792	97703064	chr2:97669792-97703064	0	+	97671475	97675868	789624	8	42,169,102,84,99,72,111,396,	0,1538,4663,6052,19102,20463,29233,32876,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	97669792	97701304	chr2:97669792-97701304	0	+	97669792	97669792	8553170	7	42,169,84,99,72,111,151,	0,1538,6052,19102,20463,29233,31361,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	97669792	97702784	chr2:97669792-97702784	1	+	97671475	97702706	789624	7	42,169,106,84,72,111,116,	0,1538,4663,6052,20463,29233,32876,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	97669792	97699139	chr2:97669792-97699139	0	+	97669792	97669792	8553170	8	42,100,169,102,84,99,72,114,	0,797,1538,4663,6052,19102,20463,29233,
#Partially deleted in new
chr2	97669798	97677755	chr2:97669798-97677755	0	+	97669798	97675698	789624	5	36,102,91,84,337,	0,4657,5832,6046,7620,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	97669799	97702830	chr2:97669799-97702830	0	+	97669799	97671270	789624	7	35,113,84,72,111,151,162,	0,1394,6045,20456,29226,31354,32869,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	97669799	97699066	chr2:97669799-97699066	0	+	97669799	97669799	8553170	6	35,113,91,84,153,41,	0,1394,5831,6045,24647,29226,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	97669816	97677507	chr2:97669816-97677507	0	+	97671475	97675639	789624	6	18,151,102,91,84,93,	0,1514,4639,5814,6028,7598,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	97669816	97699102	chr2:97669816-97699102	0	+	97671475	97675868	789624	7	18,169,102,84,72,153,77,	0,1514,4639,6028,20439,24630,29209,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	97669818	97699048	chr2:97669818-97699048	0	+	97669818	97669818	8553170	8	16,116,244,102,84,72,153,23,	0,771,1512,4637,6026,20437,24628,29207,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	97670182	97671729	chr2:97670182-97671729	0	+	97670182	97670182	8553170	2	507,399,	0,1148,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	97671330	97677700	chr2:97671330-97677700	0	+	97671330	97671330	8553170	3	169,84,282,	0,4514,6088,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	97671374	97699132	chr2:97671374-97699132	0	+	97671475	97675868	789624	7	125,102,84,99,72,153,107,	0,3081,4470,17520,18881,23072,27651,
#Deleted in new
chr2	97672278	97674557	chr2:97672278-97674557	0	+	97672278	97672278	8553170	2	172,102,	0,2177,
#Deleted in new
chr2	97674202	97675928	chr2:97674202-97675928	0	+	97674202	97674202	8553170	3	355,91,84,	0,1428,1642,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	97674327	97694578	chr2:97674327-97694578	0	+	97674327	97674327	8553170	5	230,84,99,72,132,	0,1517,14567,15928,20119,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	97674501	97702816	chr2:97674501-97702816	0	+	97674501	97675698	789624	8	56,91,84,99,72,153,111,148,	0,1129,1343,14393,15754,19945,24524,28167,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	97675820	97703024	chr2:97675820-97703024	0	+	97675820	97675820	8553170	5	108,72,153,111,356,	0,14435,18626,23205,26848,
#Partially deleted in new
chr2	97688924	97702915	chr2:97688924-97702915	0	+	97688924	97702076	789624	6	69,72,111,151,107,247,	0,1331,10101,12229,13136,13744,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	97690991	97701175	chr2:97690991-97701175	0	+	97690991	97690991	8553170	4	159,186,111,22,	0,6927,8034,10162,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	97691055	97702766	chr2:97691055-97702766	0	+	97691055	97691055	8553170	3	95,111,98,	0,7970,11613,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	97694455	97703040	chr2:97694455-97703040	0	+	97694455	97694455	8553170	4	144,111,151,372,	0,4570,6698,8213,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	97694531	97702861	chr2:97694531-97702861	0	+	97694531	97694531	8553170	5	68,111,151,107,193,	0,4494,6622,7529,8137,
#Partially deleted in new
chr2	97697256	97703049	chr2:97697256-97703049	0	+	97697256	97697256	8553170	3	65,111,381,	0,1769,5412,
#Partially deleted in new
chr2	97713559	97739860	chr2:97713559-97739860	3	+	97724036	97739498	0	14	115,79,423,161,139,88,47,52,193,207,193,141,113,486,	0,356,10456,11532,19323,19565,19737,19984,20960,21690,23913,24197,24435,25815,
#Partially deleted in new
chr2	97713581	97733782	chr2:97713581-97733782	0	+	97713581	97713581	8553170	7	93,79,423,161,139,88,486,	0,334,10434,11510,19301,19543,19715,
#Partially deleted in new
chr2	97724460	97739862	chr2:97724460-97739862	0	+	97724460	97724460	8553170	13	224,39,161,139,88,47,52,193,207,193,141,113,488,	0,394,631,8422,8664,8836,9083,10059,10789,13012,13296,13534,14914,
#Deleted in new
chr2	97732701	97733424	chr2:97732701-97733424	0	+	97732701	97732701	8553170	3	320,88,128,	0,423,595,
#Partially deleted in new
chr2	97732928	97739859	chr2:97732928-97739859	0	+	97732928	97732928	8553170	7	93,88,2160,193,141,113,485,	0,196,368,4544,4828,5066,6446,
#Partially deleted in new
chr2	97734405	97739498	chr2:97734405-97739498	1	+	97734551	97739498	0	6	307,207,193,141,113,124,	0,844,3067,3351,3589,4969,
#Partially deleted in new
chr2	97735229	97738011	chr2:97735229-97738011	0	+	97735229	97735229	8553170	3	227,193,255,	0,2243,2527,
#Deleted in new
chr2	97737821	97738577	chr2:97737821-97738577	0	+	97737821	97737821	8553170	2	76,583,	0,173,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	97756332	97765317	chr2:97756332-97765317	0	-	97756332	97756332	8553170	2	1051,6425,	0,2560,
#Partially deleted in new
chr2	97756339	97995891	chr2:97756339-97995891	3	-	97757098	97995662	789624	41	1044,161,98,97,122,166,150,125,128,176,599,159,186,187,143,152,67,110,139,118,76,153,87,105,135,111,171,154,109,109,62,57,151,81,123,117,124,69,41,62,416,	0,2553,3312,4253,4453,5695,9774,10138,15957,19503,36046,37055,38590,39878,40504,41025,45555,46088,46312,48748,49036,49211,53348,54788,56081,56299,57631,57895,58859,62273,77025,78281,78435,80737,85475,87805,102964,131712,152318,171086,239136,
#Deleted in new
chr2	97758895	97760095	chr2:97758895-97760095	0	-	97758895	97758895	8553170	2	158,444,	0,756,
#Deleted in new
chr2	97759682	97761197	chr2:97759682-97761197	0	-	97759682	97759682	8553170	3	67,97,405,	0,910,1110,
#Partially deleted in new
chr2	97792854	97796354	chr2:97792854-97796354	0	-	97792854	97796354	789624	3	130,159,137,	0,540,3363,
#Partially deleted in new
chr2	97793289	97796404	chr2:97793289-97796404	0	-	97793289	97793289	8553170	3	264,186,187,	0,1640,2928,
#Partially deleted in new
chr2	97814348	97995544	chr2:97814348-97995544	0	-	97815265	97995544	789624	13	40,109,62,57,151,81,123,117,124,69,41,62,69,	0,850,19016,20272,20426,22728,27466,29796,44955,73703,94309,113077,181127,
#Partially deleted in new
chr2	97827247	97827545	chr2:97827247-97827545	7	+	97827247	97827247	16724991	1	298,	0,
#Partially deleted in new
chr2	97841814	97907246	chr2:97841814-97907246	0	-	97841814	97888071	789624	5	123,117,124,69,132,	0,2330,17489,46237,65300,
#Partially deleted in new
chr2	97887731	97995551	chr2:97887731-97995551	0	-	97887731	97887731	8553170	4	389,41,62,76,	0,20926,39694,107744,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	97913053	97913117	chr2:97913053-97913117	3	-	97913053	97913053	8553170	1	64,	0,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr2	98087115	98313299	chr2:98087115-98313299	0	+	98093092	98119534	789624	29	248,228,95,244,160,170,116,126,197,139,132,99,221,183,131,158,120,88,157,119,51,150,202,112,125,138,101,214,1100,	0,5945,28536,32404,34183,41123,46708,75735,93900,105782,107245,124814,129639,130730,141086,142934,147532,149274,149458,163202,169008,182226,183566,203395,210791,212963,216586,224703,225084,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	98087176	98228961	chr2:98087176-98228961	0	+	98093092	98216793	789624	17	187,228,95,251,160,170,116,126,197,155,139,132,99,221,183,131,52,	0,5884,28475,32336,34122,41062,46647,75674,93839,100798,105721,107184,124753,129578,130669,141025,141733,
#Partially deleted in new
chr2	98087184	98133897	chr2:98087184-98133897	0	+	98087184	98087184	8553170	4	179,228,95,74,	0,5876,28467,46639,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr2	98087189	98292103	chr2:98087189-98292103	0	+	98087189	98087189	8553170	23	174,228,95,251,160,170,116,126,197,155,139,132,99,183,131,158,120,88,157,119,51,202,1593,	0,5871,28462,32323,34109,41049,46634,75661,93826,100785,105708,107171,124740,130656,141012,142860,147458,149200,149384,163128,168934,183492,203321,
#Partially deleted in new
chr2	98087189	98236808	chr2:98087189-98236808	0	+	98093092	98181099	789624	16	174,228,95,251,160,126,197,139,132,99,183,131,158,120,88,235,	0,5871,28462,32323,34109,75661,93826,105708,107171,124740,130656,141012,142860,147458,149200,149384,
#Partially deleted in new
chr2	98087191	98312714	chr2:98087191-98312714	3	+	98093092	98312349	789624	28	172,228,95,251,160,170,116,126,197,155,139,132,99,183,131,158,120,88,157,119,51,202,112,125,138,101,214,515,	0,5869,28460,32321,34107,41047,46632,75659,93824,100783,105706,107169,124738,130654,141010,142858,147456,149198,149382,163126,168932,183490,203319,210715,212887,216510,224627,225008,
#Partially deleted in new
chr2	98087235	98236805	chr2:98087235-98236805	0	+	98093092	98181099	789624	19	128,228,95,251,160,170,116,126,74,197,139,132,99,183,131,158,120,88,232,	0,5825,28416,32277,34063,41003,46588,75615,92008,93780,105662,107125,124694,130610,140966,142814,147412,149154,149338,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	98087235	98216964	chr2:98087235-98216964	0	+	98093092	98121382	789624	13	128,228,95,160,170,116,126,197,155,139,132,99,182,	0,5825,28416,34063,41003,46588,75615,93780,100739,105662,107125,124694,129547,
#Partially deleted in new
chr2	98087235	98121412	chr2:98087235-98121412	0	+	98087235	98087235	8553170	4	128,228,95,114,	0,5825,28416,34063,
#Partially deleted in new
chr2	98087235	98119661	chr2:98087235-98119661	0	+	98087235	98087235	8553170	5	128,228,117,95,149,	0,5825,11987,28416,32277,
#Deleted in new
chr2	98119608	98122100	chr2:98119608-98122100	0	+	98119608	98119608	8553170	3	155,160,156,	0,1690,2336,
#Partially deleted in new
chr2	98128152	98133982	chr2:98128152-98133982	0	+	98128152	98128152	8553170	2	256,301,	0,5529,
#Duplicated in new
chr2	98192269	98217960	chr2:98192269-98217960	0	+	98192269	98192269	8553170	5	73,139,132,99,115,	0,628,2091,19660,25576,
#Duplicated in new
chr2	98192285	98212171	chr2:98192285-98212171	0	+	98192285	98192285	8553170	4	57,139,132,242,	0,612,2075,19644,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr2	98192990	98312947	chr2:98192990-98312947	0	+	98192990	98216793	789624	20	46,132,99,221,183,131,158,120,88,157,119,51,202,112,125,138,101,214,242,72,	0,1370,18939,23764,24855,35211,37059,41657,43399,43583,57327,63133,77691,97520,104916,107088,110711,118828,119209,119885,
#Deleted in new
chr2	98206150	98207724	chr2:98206150-98207724	7	+	98206150	98206150	16724991	1	1574,	0,
#Partially deleted in new
chr2	98211961	98312940	chr2:98211961-98312940	0	+	98211961	98312236	789624	15	67,183,131,158,120,88,157,119,51,202,112,125,138,101,1122,	0,5884,16240,18088,22686,24428,24612,38356,44162,58720,78549,85945,88117,91740,99857,
#Partially deleted in new
chr2	98211961	98312939	chr2:98211961-98312939	0	+	98211961	98230112	789624	15	67,183,158,120,88,157,119,51,202,112,125,138,101,214,740,	0,5884,18088,22686,24428,24612,38356,44162,58720,78549,85945,88117,91740,99857,100238,
#Partially deleted in new
chr2	98230135	98236804	chr2:98230135-98236804	0	+	98230135	98230135	8553170	3	72,120,231,	0,4512,6438,
#Partially deleted in new
chr2	98236632	98250423	chr2:98236632-98250423	0	+	98236632	98250423	789624	3	98,42,106,	0,5624,13685,
#Partially deleted in new
chr2	98245432	98312940	chr2:98245432-98312940	0	+	98245432	98245432	8553170	11	167,119,51,202,112,125,138,101,183,238,65,	0,4885,10691,25249,45078,52474,54646,58269,66386,66771,67443,
#Partially deleted in new
chr2	98245432	98312946	chr2:98245432-98312946	1	+	98245560	98312349	789624	11	167,119,51,202,112,125,138,101,214,242,71,	0,4885,10691,25249,45078,52474,54646,58269,66386,66767,67443,
#Partially deleted in new
chr2	98331388	98333971	chr2:98331388-98333971	1	-	98331388	98331388	8553170	4	361,88,63,49,	0,1828,2052,2534,
#Partially deleted in new
chr2	98331707	98334380	chr2:98331707-98334380	0	-	98331707	98331707	8553170	3	42,88,458,	0,1509,2215,
#Partially deleted in new
chr2	98333213	98356005	chr2:98333213-98356005	3	-	98333213	98333213	8553170	4	91,63,193,191,	0,227,709,22601,
#Partially deleted in new
chr2	98346154	98398594	chr2:98346154-98398594	3	+	98369975	98397255	0	8	380,138,114,180,54,117,107,2751,	0,23784,31532,34020,37233,43503,45709,49689,
#Partially deleted in new
chr2	98346187	98397344	chr2:98346187-98397344	1	+	98369975	98397255	0	7	347,138,114,180,117,107,1501,	0,23751,31499,33987,43470,45676,49656,
#Deleted in new
chr2	98346994	98351140	chr2:98346994-98351140	3	+	98346994	98346994	8553170	2	184,357,	0,3789,
#Partially deleted in new
chr2	98369936	98398601	chr2:98369936-98398601	1	+	98369975	98397255	0	7	140,114,180,54,117,107,2758,	0,7750,10238,13451,19721,21927,25907,
#Partially deleted in new
chr2	98377287	98397632	chr2:98377287-98397632	1	+	98377738	98397255	0	8	89,114,165,180,54,117,107,1789,	0,399,770,2887,6100,12370,14576,18556,
#Partially deleted in new
chr2	98379900	98389772	chr2:98379900-98389772	0	+	98379900	98379900	8553170	2	454,115,	0,9757,
#Partially deleted in new
chr2	98444853	98594390	chr2:98444853-98594390	1	+	98520048	98587608	789624	26	232,62,209,45,119,117,80,112,91,148,131,105,109,15,184,219,139,33,173,124,127,141,98,113,155,6915,	0,74110,75092,75833,88523,90875,91275,93009,94037,94674,99023,101115,101732,104101,107932,109417,110699,114609,118611,119786,120786,121175,123717,127961,132135,142622,
#Partially deleted in new
chr2	98444857	98591033	chr2:98444857-98591033	1	+	98520048	98587608	789624	26	228,62,209,45,119,117,80,112,91,148,131,105,109,15,184,219,256,33,173,124,127,141,98,113,155,3558,	0,74106,75088,75829,88519,90871,91271,93005,94033,94670,99019,101111,101728,104097,107928,109413,110695,114605,118607,119782,120782,121171,123713,127957,132131,142618,
#Partially deleted in new
chr2	98444857	98587859	chr2:98444857-98587859	1	+	98520048	98587608	789624	11	228,62,209,45,80,50,141,98,113,155,384,	0,74106,75088,75829,88519,120859,121171,123713,127957,132131,142618,
#Partially deleted in new
chr2	98444857	98587661	chr2:98444857-98587661	1	+	98520048	98587608	789624	25	228,62,209,45,119,117,80,112,91,148,131,105,109,184,219,256,33,173,124,127,141,98,113,155,186,	0,74106,75088,75829,88519,90871,91271,93005,94033,94670,99019,101111,101728,107928,109413,110695,114605,118607,119782,120782,121171,123713,127957,132131,142618,
#Partially deleted in new
chr2	98444949	98581821	chr2:98444949-98581821	3	+	98520048	98581756	789624	26	136,62,209,45,119,117,80,112,91,148,131,105,109,15,184,219,139,33,173,124,127,141,98,113,155,246,	0,74014,74996,75737,88427,90779,91179,92913,93941,94578,98927,101019,101636,104005,107836,109321,110603,114513,118515,119690,120690,121079,123621,127865,132039,136626,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	98519146	98521766	chr2:98519146-98521766	0	+	98519146	98519146	8553170	3	716,209,1080,	0,799,1540,
#Partially deleted in new
chr2	98520048	98587608	chr2:98520048-98587608	1	+	98520048	98587608	789624	24	106,45,119,117,80,112,91,148,131,105,109,15,184,219,256,33,173,124,127,141,98,113,155,133,	0,638,13328,15680,16080,17814,18842,19479,23828,25920,26537,28906,32737,34222,35504,39414,43416,44591,45591,45980,48522,52766,56940,67427,
#Deleted in new
chr2	98554424	98556122	chr2:98554424-98556122	0	+	98554424	98554424	8553170	2	65,570,	0,1128,
#Deleted in new
chr2	98566027	98569830	chr2:98566027-98569830	0	+	98566027	98566027	8553170	5	142,98,126,255,248,	0,2543,2855,3130,3555,
#Partially deleted in new
chr2	98571896	98587573	chr2:98571896-98587573	0	+	98571896	98571896	8553170	4	133,113,155,98,	0,918,5092,15579,
#Partially deleted in new
chr2	98599309	98608492	chr2:98599309-98608492	3	-	98600751	98608405	789624	3	1484,84,186,	0,4798,8997,
#Partially deleted in new
chr2	98600352	98608507	chr2:98600352-98608507	0	-	98600352	98600352	8553170	3	441,84,245,	0,3755,7910,
#Partially deleted in new
chr2	98600472	98605837	chr2:98600472-98605837	0	-	98600472	98600472	8553170	3	321,84,76,	0,3635,5289,
#Partially deleted in new
chr2	98600518	98604790	chr2:98600518-98604790	0	-	98600518	98600518	8553170	2	275,683,	0,3589,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	98602381	98608515	chr2:98602381-98608515	1	-	98602606	98608405	789624	3	264,84,209,	0,1726,5925,
#Partially deleted in new
chr2	98608578	98618515	chr2:98608578-98618515	3	+	98609759	98618304	789624	6	148,284,121,140,102,348,	0,1177,2196,7628,7853,9589,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	98608578	98618515	chr2:98608578-98618515	1	+	98609708	98618304	789624	5	1461,121,140,102,348,	0,2196,7628,7853,9589,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	98608843	98618515	chr2:98608843-98618515	1	+	98609708	98618304	789624	6	168,397,121,140,102,348,	0,799,1931,7363,7588,9324,
#Partially deleted in new
chr2	98616205	98618515	chr2:98616205-98618515	0	+	98616205	98618288	789624	3	141,102,370,	0,226,1940,
#Partially deleted in new
chr2	98616205	98618515	chr2:98616205-98618515	0	+	98616205	98618304	789624	2	141,348,	0,1962,
#Partially deleted in new
chr2	98616396	98618512	chr2:98616396-98618512	0	+	98616396	98616396	8553170	2	137,345,	0,1771,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	98619105	98726696	chr2:98619105-98726696	1	-	98625565	98726332	789624	15	6487,113,67,79,194,108,131,115,76,114,47,134,141,168,458,	0,6617,16116,17411,20702,21015,24817,26322,36339,37246,39112,43940,55929,59198,107133,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	98619105	98731126	chr2:98619105-98731126	3	-	98625565	98726332	789624	16	6487,113,67,79,194,108,131,115,76,114,47,134,141,168,329,79,	0,6617,16116,17411,20702,21015,24817,26322,36339,37246,39112,43940,55929,59198,107133,111942,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	98619107	98663473	chr2:98619107-98663473	1	-	98621430	98663359	789624	13	2398,113,67,79,194,108,131,115,76,114,47,134,133,	0,6615,16114,17409,20700,21013,24815,26320,36337,37244,39110,43938,44233,
#Partially deleted in new
chr2	98625504	98726832	chr2:98625504-98726832	1	-	98625565	98726332	789624	16	88,113,67,79,194,108,131,115,76,114,47,134,141,168,329,114,	0,218,9717,11012,14303,14616,18418,19923,29940,30847,32713,37541,49530,52799,100734,101214,
#Partially deleted in new
chr2	98645455	98663473	chr2:98645455-98663473	0	-	98645455	98645455	8553170	6	87,76,114,47,134,133,	0,9989,10896,12762,17590,17885,
#Partially deleted in new
chr2	98655861	98663473	chr2:98655861-98663473	0	-	98655861	98655861	8553170	4	604,47,134,133,	0,2356,7184,7479,
#Partially deleted in new
chr2	98663077	98726881	chr2:98663077-98726881	0	-	98663077	98663077	8553170	5	102,141,168,329,28,	0,11957,15226,63161,63776,
#Partially deleted in new
chr2	98678420	98731093	chr2:98678420-98731093	0	-	98678420	98678420	8553170	3	51,329,46,	0,47818,52627,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	98694108	98695490	chr2:98694108-98695490	7	+	98694108	98694108	16724991	1	1382,	0,
#Partially deleted in new
chr2	98725938	98730248	chr2:98725938-98730248	1	-	98726197	98726332	789624	2	629,54,	0,4256,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	98761937	98772080	chr2:98761937-98772080	1	-	98761937	98761937	789624	4	641,176,145,462,	0,6673,6964,9681,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	98762367	98772920	chr2:98762367-98772920	2	-	98762367	98762367	8553170	6	211,176,145,290,124,109,	0,6243,6534,9251,9651,10444,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	98762367	98772279	chr2:98762367-98772279	1	-	98762367	98762367	8553170	5	211,176,145,282,291,	0,6243,6534,9251,9621,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	98771249	98772279	chr2:98771249-98772279	0	-	98771249	98771249	8553170	2	651,291,	0,739,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	98782409	98782548	chr2:98782409-98782548	3	+	98782409	98782409	8553170	1	139,	0,
#Partially deleted in new
chr2	98793845	98936259	chr2:98793845-98936259	3	-	98794531	98846800	789624	10	826,145,188,1681,195,165,136,169,80,322,	0,2274,3504,28011,33129,38502,39016,44273,52885,142092,
#Partially deleted in new
chr2	98809738	98822304	chr2:98809738-98822304	0	-	98809738	98809738	8553170	2	41,448,	0,12118,
#Partially deleted in new
chr2	98826974	98936174	chr2:98826974-98936174	0	-	98826974	98826974	8553170	5	195,165,169,80,237,	0,5373,11144,19756,108963,
#Partially deleted in new
chr2	98826987	98869362	chr2:98826987-98869362	0	-	98826987	98869151	789624	6	182,165,136,169,80,285,	0,5360,5874,11131,19743,42090,
#Partially deleted in new
chr2	98832347	98936203	chr2:98832347-98936203	0	-	98832347	98897408	789624	6	165,136,169,80,105,266,	0,514,5771,14383,65029,103590,
#Partially deleted in new
chr2	98832393	98908521	chr2:98832393-98908521	0	-	98832393	98897408	789624	6	119,136,169,80,102,129,	0,468,5725,14337,64983,75999,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	98840674	98840736	chr2:98840674-98840736	3	-	98840674	98840674	8553170	1	62,	0,
#Partially deleted in new
chr2	98846730	98936259	chr2:98846730-98936259	0	-	98846730	98897408	789624	4	80,102,238,322,	0,50646,66017,89207,
#Partially deleted in new
chr2	98997260	99154917	chr2:98997260-99154917	3	-	98998196	99109439	789624	21	961,150,105,203,210,186,111,169,56,155,116,152,78,171,159,124,66,216,136,129,225,	0,20939,21275,23019,37969,67678,71627,74445,75757,81398,84021,106706,108098,108266,111572,112128,113589,120283,121290,129787,157432,
#Partially deleted in new
chr2	98997885	99141572	chr2:98997885-99141572	1	-	98998196	99109439	789624	20	336,150,105,203,210,186,111,169,56,155,116,152,78,171,159,124,66,216,129,145,	0,20314,20650,22394,37344,67053,71002,73820,75132,80773,83396,106081,107473,107641,110947,111503,112964,119658,129162,143542,
#Partially deleted in new
chr2	98997885	99118779	chr2:98997885-99118779	1	-	98998196	99109439	789624	19	336,150,105,203,210,186,111,169,56,155,116,152,78,171,159,168,66,216,229,	0,20314,20650,22394,37344,67053,71002,73820,75132,80773,83396,106081,107473,107641,110947,111503,112964,119658,120665,
#Partially deleted in new
chr2	99018199	99141419	chr2:99018199-99141419	0	-	99018199	99109439	789624	18	150,105,203,210,186,111,169,56,155,116,152,78,171,159,168,66,129,76,	0,336,2080,17030,46739,50688,53506,54818,60459,63082,85767,87159,87327,90633,91189,92650,108848,123144,
#Partially deleted in new
chr2	99018199	99127176	chr2:99018199-99127176	0	-	99018199	99109439	789624	17	150,105,203,186,111,169,56,155,116,152,78,171,159,168,66,216,129,	0,336,2080,46739,50688,53506,54818,60459,63082,85767,87159,87327,90633,91189,92650,99344,108848,
#Partially deleted in new
chr2	99018199	99078928	chr2:99018199-99078928	0	-	99018199	99018199	8553170	7	150,105,210,186,111,169,270,	0,336,17030,46739,50688,53506,60459,
#Partially deleted in new
chr2	99064929	99127146	chr2:99064929-99127146	0	-	99064929	99064929	8553170	13	195,111,169,56,116,152,78,171,159,168,66,216,99,	0,3958,6776,8088,16352,39037,40429,40597,43903,44459,45920,52614,62118,
#Partially deleted in new
chr2	99068925	99127168	chr2:99068925-99127168	0	-	99068925	99068925	8553170	7	73,169,56,155,116,152,121,	0,2780,4092,9733,12356,35041,58122,
#Partially deleted in new
chr2	99102017	99102752	chr2:99102017-99102752	7	+	99102017	99102017	16724991	1	735,	0,
#Partially deleted in new
chr2	99109402	99141149	chr2:99109402-99141149	0	-	99109402	99109402	8553170	5	110,66,216,129,67,	0,1447,8141,17645,31680,
#Partially deleted in new
chr2	99109500	99141180	chr2:99109500-99141180	0	-	99109500	99109500	8553170	5	56,66,216,129,113,	0,1349,8043,17547,31567,
#Partially deleted in new
chr2	99109513	99154962	chr2:99109513-99154962	0	-	99109513	99109513	8553170	4	43,66,216,270,	0,1336,8030,45179,
#Partially deleted in new
chr2	99117127	99154964	chr2:99117127-99154964	0	-	99117127	99117127	8553170	4	119,216,129,272,	0,416,9920,37565,
#Partially deleted in new
chr2	99117543	99141421	chr2:99117543-99141421	0	-	99117543	99117543	8553170	4	216,136,129,78,	0,1007,9504,23800,
#Partially deleted in new
chr2	99117566	99141421	chr2:99117566-99141421	0	-	99117566	99117566	8553170	5	193,136,25,129,78,	0,984,1210,9481,23777,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	99124766	99141149	chr2:99124766-99141149	0	-	99124766	99124766	8553170	2	2410,82,	0,16301,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	99141484	99151487	chr2:99141484-99151487	1	+	99150558	99150834	789624	4	453,117,92,1005,	0,800,5917,8998,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	99141721	99151463	chr2:99141721-99151463	3	+	99147467	99150834	789624	4	216,117,92,981,	0,563,5680,8761,
#Partially deleted in new
chr2	99141749	99151047	chr2:99141749-99151047	1	+	99150558	99150834	789624	5	188,117,96,92,565,	0,535,5277,5652,8733,
#Partially deleted in new
chr2	99141949	99147490	chr2:99141949-99147490	0	+	99141949	99141949	8553170	2	452,89,	0,5452,
#Partially deleted in new
chr2	99148263	99154890	chr2:99148263-99154890	0	-	99148263	99148263	8553170	2	85,198,	0,6429,
#Partially deleted in new
chr2	99148263	99154869	chr2:99148263-99154869	0	-	99148263	99148263	8553170	3	85,137,33,	0,6027,6573,
#Partially deleted in new
chr2	99148263	99154636	chr2:99148263-99154636	0	-	99148263	99148263	8553170	2	85,346,	0,6027,
#Partially deleted in new
chr2	99148264	99154861	chr2:99148264-99154861	0	-	99148264	99148264	8553170	3	84,137,169,	0,6026,6428,
#Partially deleted in new
chr2	99154954	99163148	chr2:99154954-99163148	1	+	99161957	99163079	789624	2	97,1192,	0,7002,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	99154954	99163157	chr2:99154954-99163157	3	+	99161957	99163079	789624	3	97,126,1201,	0,1346,7002,
#Partially deleted in new
chr2	99154976	99162363	chr2:99154976-99162363	0	+	99161957	99162363	789624	2	75,407,	0,6980,
#Partially deleted in new
chr2	99154984	99162711	chr2:99154984-99162711	0	+	99161957	99162711	789624	3	67,63,755,	0,497,6972,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	99154992	99156810	chr2:99154992-99156810	0	+	99154992	99154992	8553170	2	59,510,	0,1308,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	99154997	99195298	chr2:99154997-99195298	3	+	99186203	99195232	8553170	6	54,126,78,81,147,183,	0,1303,31179,33179,39753,40118,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	99155073	99162275	chr2:99155073-99162275	0	+	99161957	99162275	789624	4	295,63,126,319,	0,408,1227,6883,
#Partially deleted in new
chr2	99155080	99162075	chr2:99155080-99162075	0	+	99161957	99162075	789624	2	464,119,	0,6876,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	99161426	99171405	chr2:99161426-99171405	0	-	99161426	99161426	8553170	4	242,61,116,63,	0,8123,9110,9916,
#Partially deleted in new
chr2	99161946	99180927	chr2:99161946-99180927	0	-	99169374	99180927	789624	8	272,99,61,116,87,137,102,97,	0,7425,7603,8590,9396,9563,11968,18884,
#Partially deleted in new
chr2	99169262	99181058	chr2:99169262-99181058	3	-	99169374	99180981	0	7	208,61,116,87,137,102,228,	0,287,1274,2080,2247,4652,11568,
#Partially deleted in new
chr2	99169262	99181034	chr2:99169262-99181034	0	-	99173437	99180981	789624	7	348,116,87,137,89,102,204,	0,1274,2080,2247,4151,4652,11568,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	99169262	99180962	chr2:99169262-99180962	0	-	99169262	99169262	8553170	4	348,116,2674,132,	0,1274,2080,11568,
#Partially deleted in new
chr2	99169265	99170905	chr2:99169265-99170905	0	-	99169265	99169265	8553170	2	345,369,	0,1271,
#Partially deleted in new
chr2	99169444	99181050	chr2:99169444-99181050	0	-	99169444	99180981	789624	6	26,61,116,137,102,220,	0,105,1092,2065,4470,11386,
#Partially deleted in new
chr2	99170534	99178335	chr2:99170534-99178335	0	-	99170534	99170534	8553170	6	118,87,137,89,102,46,	0,808,975,2879,3380,7755,
#Partially deleted in new
chr2	99173346	99181035	chr2:99173346-99181035	0	-	99180819	99180981	789624	2	670,329,	0,7360,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	99181078	99197626	chr2:99181078-99197626	3	+	99186203	99195705	0	6	171,78,81,147,74,2054,	0,5098,7098,13672,14037,14494,
#Partially deleted in new
chr2	99181151	99195178	chr2:99181151-99195178	0	+	99181151	99181151	8553170	6	98,78,100,81,147,63,	0,5025,5767,7025,13599,13964,
#Partially deleted in new
chr2	99181185	99195089	chr2:99181185-99195089	1	+	99186203	99194924	789624	4	64,78,81,339,	0,4991,6991,13565,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	99181210	99197399	chr2:99181210-99197399	0	+	99181210	99181210	8553170	5	39,147,74,450,1042,	0,13540,13905,14362,15147,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	99186175	99197423	chr2:99186175-99197423	0	+	99186203	99195705	0	6	79,81,147,74,251,865,	0,2001,8575,8940,9397,10383,
#Partially deleted in new
chr2	99242245	99254281	chr2:99242245-99254281	1	-	99242363	99254260	789624	5	237,139,197,141,64,	0,1753,3016,4434,11972,
#Partially deleted in new
chr2	99242253	99255107	chr2:99242253-99255107	3	-	99242363	99254260	789624	6	229,139,197,141,68,88,	0,1745,3008,4426,11964,12766,
#Partially deleted in new
chr2	99242318	99254281	chr2:99242318-99254281	1	-	99243455	99254260	789624	6	164,61,139,197,141,64,	0,1093,1680,2943,4361,11899,
#Partially deleted in new
chr2	99243455	99255107	chr2:99243455-99255107	1	-	99243455	99254260	789624	6	17,139,197,141,68,88,	0,543,1806,3224,10762,11564,
#Partially deleted in new
chr2	99243785	99255139	chr2:99243785-99255139	1	-	99243969	99254260	789624	5	352,197,141,68,120,	0,1476,2894,10432,11234,
#Partially deleted in new
chr2	99244009	99255282	chr2:99244009-99255282	0	-	99244009	99254260	789624	6	128,197,141,73,118,25,	0,1252,2670,10208,11010,11248,
#Partially deleted in new
chr2	99284237	99301176	chr2:99284237-99301176	1	-	99284392	99295670	789624	7	274,133,185,105,75,91,127,	0,450,6999,8298,11390,14221,16812,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	99284256	99304742	chr2:99284256-99304742	3	-	99284392	99295670	789624	8	255,133,185,105,75,91,91,103,	0,431,6980,8279,11371,14202,16793,20383,
#Partially deleted in new
chr2	99307441	99322741	chr2:99307441-99322741	0	+	99307441	99307441	8553170	4	38,113,78,233,	0,13711,14509,15067,
#Partially deleted in new
chr2	99318981	99336462	chr2:99318981-99336462	3	-	99319681	99333210	789624	5	818,255,119,221,224,	0,2973,8553,14040,17257,
#Partially deleted in new
chr2	99319507	99333242	chr2:99319507-99333242	0	-	99322203	99333210	789624	3	292,255,221,	0,2447,13514,
#Partially deleted in new
chr2	99321533	99336333	chr2:99321533-99336333	1	-	99321950	99333210	789624	4	676,119,221,95,	0,6001,11488,14705,
#Partially deleted in new
chr2	99321560	99336310	chr2:99321560-99336310	0	-	99321560	99321560	8553170	4	649,119,259,72,	0,5974,11423,14678,
#Partially deleted in new
chr2	99321943	99336333	chr2:99321943-99336333	0	-	99332985	99333210	789624	4	266,119,259,95,	0,5591,11040,14295,
#Partially deleted in new
chr2	99322062	99336385	chr2:99322062-99336385	1	-	99322598	99333210	789624	5	147,99,119,221,147,	0,498,5472,10959,14176,
#Partially deleted in new
chr2	99322110	99340702	chr2:99322110-99340702	0	-	99322110	99333210	789624	5	99,119,221,75,54,	0,5424,10911,16206,18538,
#Partially deleted in new
chr2	99332761	99336356	chr2:99332761-99336356	0	-	99332761	99332761	8553170	2	481,118,	0,3477,
#Partially deleted in new
chr2	99336336	99340696	chr2:99336336-99340696	0	-	99336336	99336336	8553170	3	396,75,48,	0,1980,4312,
#Partially deleted in new
chr2	99337352	99401326	chr2:99337352-99401326	3	+	99337554	99399414	789624	24	237,126,85,673,218,151,99,90,75,290,108,111,68,142,132,183,162,132,132,77,165,139,162,2020,	0,22883,23112,23795,26292,26918,31140,32039,34303,38994,41666,41965,44806,45427,52365,52866,53191,55614,56914,57156,57366,59407,61395,61954,
#Partially deleted in new
chr2	99337370	99400265	chr2:99337370-99400265	1	+	99337554	99399414	789624	25	219,126,85,673,218,151,99,94,2,69,290,108,111,68,142,132,183,162,132,132,77,165,139,162,959,	0,22865,23094,23777,26274,26900,31122,32021,33767,34291,38976,41648,41947,44788,45409,52347,52848,53173,55596,56896,57138,57348,59389,61377,61936,
#Deleted in new
chr2	99389606	99390690	chr2:99389606-99390690	0	+	99389606	99389606	8553170	3	243,183,147,	0,612,937,
#Partially deleted in new
chr2	99394808	99399197	chr2:99394808-99399197	0	+	99394808	99394808	8553170	3	75,139,450,	0,1951,3939,
#Deleted in new
chr2	99397046	99399774	chr2:99397046-99399774	0	+	99397046	99397046	8553170	2	1863,468,	0,2260,
#Partially deleted in new
chr2	99400474	99490035	chr2:99400474-99490035	3	-	99401240	99464975	0	23	878,103,157,218,121,234,197,166,103,173,221,120,155,129,109,117,108,710,153,169,127,64,219,	0,1769,2169,2414,3220,3969,5435,5850,7554,10220,12256,18353,21024,23677,29365,33857,35359,38126,41842,48861,62021,64447,89342,
#Partially deleted in new
chr2	99400474	99489973	chr2:99400474-99489973	1	-	99401240	99464975	0	23	878,103,157,218,121,234,197,166,103,173,221,120,155,129,106,117,108,710,153,169,127,64,157,	0,1769,2169,2414,3220,3969,5435,5850,7554,10220,12256,18353,21024,23677,29365,33857,35359,38126,41842,48861,62021,64447,89342,
#Partially deleted in new
chr2	99400949	99490035	chr2:99400949-99490035	0	-	99451472	99464975	789624	23	403,557,218,121,234,197,166,103,173,221,120,155,129,106,117,108,710,153,169,157,127,64,219,	0,1294,1939,2745,3494,4960,5375,7079,9745,11781,17878,20549,23202,28890,33382,34884,37651,41367,48386,50395,61546,63972,88867,
#Partially deleted in new
chr2	99402258	99412953	chr2:99402258-99412953	0	-	99402258	99402258	8553170	3	88,173,223,	0,8436,10472,
#Deleted in new
chr2	99402529	99403430	chr2:99402529-99403430	0	-	99402529	99402529	8553170	2	271,542,	0,359,
#Deleted in new
chr2	99403039	99406353	chr2:99403039-99406353	0	-	99403039	99403039	8553170	4	67,121,234,444,	0,655,1404,2870,
#Partially deleted in new
chr2	99403055	99451480	chr2:99403055-99451480	0	-	99403055	99403055	8553170	18	51,121,234,197,166,103,173,221,120,155,129,109,117,108,710,153,169,136,	0,639,1388,2854,3269,4973,7639,9675,15772,18443,21096,26784,31276,32778,35545,39261,46280,48289,
#Deleted in new
chr2	99405217	99405843	chr2:99405217-99405843	3	+	99405217	99405217	8553170	1	626,	0,
#Partially deleted in new
chr2	99405927	99410850	chr2:99405927-99410850	0	-	99406398	99410850	789624	4	179,107,103,156,	0,397,2101,4767,
#Deleted in new
chr2	99405932	99406928	chr2:99405932-99406928	0	-	99405932	99405932	8553170	2	174,604,	0,392,
#Partially deleted in new
chr2	99406083	99408403	chr2:99406083-99408403	0	-	99406083	99406083	8553170	3	23,166,375,	0,241,1945,
#Partially deleted in new
chr2	99418831	99424634	chr2:99418831-99424634	0	-	99418831	99418831	8553170	3	116,155,483,	0,2667,5320,
#Partially deleted in new
chr2	99424780	99438727	chr2:99424780-99438727	0	-	99424780	99438727	789624	5	119,106,117,108,127,	0,5059,9551,11053,13820,
#Partially deleted in new
chr2	99431800	99438817	chr2:99431800-99438817	0	-	99431800	99431800	8553170	4	140,117,108,217,	0,2531,4033,6800,
#Partially deleted in new
chr2	99435474	99438680	chr2:99435474-99438680	0	-	99435474	99435474	8553170	2	467,80,	0,3126,
#Partially deleted in new
chr2	99435836	99438777	chr2:99435836-99438777	0	-	99435836	99435836	8553170	3	105,145,177,	0,810,2764,
#Partially deleted in new
chr2	99438573	99462788	chr2:99438573-99462788	0	-	99438573	99438573	8553170	4	737,153,169,293,	0,3743,10762,23922,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr2	99545418	100104716	chr2:99545418-100104716	1	-	99551473	100104454	789624	23	6177,224,50,94,72,137,64,125,202,125,1095,187,41,52,52,37,81,48,386,313,121,117,49,	0,8892,9264,13456,14946,20068,23433,32908,37379,41735,47776,56016,104207,127119,181658,198685,206802,292058,461213,461729,463393,558983,559249,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr2	99547255	100142575	chr2:99547255-100142575	1	-	99551473	100104454	789624	24	4340,224,50,94,72,137,64,125,202,125,1095,187,41,52,52,37,81,48,386,313,121,117,80,92,	0,7055,7427,11619,13109,18231,21596,31071,35542,39898,45939,54179,102370,125282,179821,196848,204965,290221,459376,459892,461556,557146,558248,595228,
#Partially deleted in new
chr2	99551120	100106128	chr2:99551120-100106128	3	-	99551473	100104454	789624	25	475,224,50,94,72,137,64,125,202,125,1095,187,41,52,52,37,81,48,386,313,121,75,117,80,89,	0,3190,3562,7754,9244,14366,17731,27206,31677,36033,42074,50314,98505,121417,175956,192983,201100,286356,455511,456027,457691,460376,553281,554383,554919,
#Partially deleted in new
chr2	99554392	99578370	chr2:99554392-99578370	0	-	99554392	99578370	789624	7	94,50,94,72,137,64,44,	0,290,4482,5972,11094,14459,23934,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	99630577	100006845	chr2:99630577-100006845	0	-	99631002	100006845	789624	9	105,100,41,52,52,37,81,48,214,	0,338,19048,41960,96499,113526,121643,206899,376054,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	100006148	100007951	chr2:100006148-100007951	0	-	100006148	100006148	8553170	2	869,804,	0,999,
#Partially deleted in new
chr2	100007151	100104530	chr2:100007151-100104530	0	-	100007151	100104454	789624	3	309,121,129,	0,1660,97250,
#Partially deleted in new
chr2	100007168	100142575	chr2:100007168-100142575	0	-	100007168	100104454	789624	5	292,121,117,80,92,	0,1643,97233,98335,135315,
#Partially deleted in new
chr2	100007248	100105427	chr2:100007248-100105427	0	-	100007248	100104454	789624	4	212,121,117,93,	0,1563,97153,98086,
#Partially deleted in new
chr2	100007292	100105339	chr2:100007292-100105339	0	-	100007292	100104454	789624	4	168,121,117,145,	0,1519,97109,97902,
#Partially deleted in new
chr2	100007336	100142583	chr2:100007336-100142583	0	-	100007336	100104454	789624	5	124,121,117,83,100,	0,1475,97065,121887,135147,
#Partially deleted in new
chr2	100007398	100105807	chr2:100007398-100105807	0	-	100007398	100105683	789624	6	62,121,75,117,80,136,	0,1413,4098,97003,98105,98273,
#Partially deleted in new
chr2	100008898	100106047	chr2:100008898-100106047	0	-	100008898	100106022	789624	5	34,75,117,80,268,	0,2598,95503,96605,96881,
#Deleted in new
chr2	100104401	100106047	chr2:100104401-100106047	0	-	100104401	100104454	789624	3	117,80,331,	0,1102,1315,
#Deleted in new
chr2	100104918	100107504	chr2:100104918-100107504	3	+	100104918	100104918	8553170	1	2586,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	100109844	100142739	chr2:100109844-100142739	0	-	100109844	100109844	8553170	5	489,139,83,112,29,	0,2541,19379,32639,32866,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	100208253	100251484	chr2:100208253-100251484	3	+	100208253	100208253	789624	3	567,127,2421,	0,38858,40810,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	100242630	100249262	chr2:100242630-100249262	0	+	100242630	100242630	8553170	3	255,127,199,	0,4481,6433,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	100273290	100322733	chr2:100273290-100322733	3	-	100284297	100322093	789624	12	11202,150,163,159,122,115,94,202,144,123,119,1319,	0,13623,16967,20938,22141,25545,25935,26426,27353,29630,35816,48124,
#Partially deleted in new
chr2	100283541	100309505	chr2:100283541-100309505	1	-	100284297	100309175	789624	12	951,150,163,159,122,115,94,202,144,123,119,21,	0,3372,6716,10687,11890,15294,15684,16175,17102,19379,25565,25943,
#Partially deleted in new
chr2	100370254	100370545	chr2:100370254-100370545	7	-	100370254	100370254	16724991	1	291,	0,
#Deleted in new
chr2	100377420	100377532	chr2:100377420-100377532	7	+	100377420	100377420	16724991	1	112,	0,
#Partially deleted in new
chr2	100391859	100417656	chr2:100391859-100417656	3	-	100393244	100406675	789624	7	1923,106,235,92,132,71,283,	0,3649,6048,10704,14716,23181,25514,
#Partially deleted in new
chr2	100393244	100417011	chr2:100393244-100417011	1	-	100393244	100406675	789624	7	538,106,235,92,132,71,164,	0,2264,4663,9319,13331,21796,23603,
#Partially deleted in new
chr2	100397907	100417454	chr2:100397907-100417454	0	-	100397907	100397907	8553170	4	235,132,71,81,	0,8668,17133,19466,
#Partially deleted in new
chr2	100397910	100417334	chr2:100397910-100417334	0	-	100397910	100406675	789624	5	232,92,132,71,77,	0,4653,8665,17130,19347,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	100397935	100415845	chr2:100397935-100415845	0	-	100397935	100406675	789624	5	207,92,132,71,72,	0,4628,8640,17105,17838,
#Partially deleted in new
chr2	100398051	100417187	chr2:100398051-100417187	0	-	100398051	100417029	789624	5	91,92,132,71,199,	0,4512,8524,16989,18937,
#Partially deleted in new
chr2	100398079	100417340	chr2:100398079-100417340	0	-	100398079	100406675	789624	6	63,92,132,118,71,83,	0,4484,8496,10463,16961,19178,
#Partially deleted in new
chr2	100402563	100417351	chr2:100402563-100417351	0	-	100402563	100406675	789624	5	92,132,71,303,94,	0,4012,12477,13659,14694,
#Partially deleted in new
chr2	100406575	100417379	chr2:100406575-100417379	0	-	100406575	100406675	789624	4	132,71,348,122,	0,8465,10147,10682,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	100407672	100417614	chr2:100407672-100417614	0	-	100407672	100407672	8553170	5	34,100,118,71,241,	0,120,870,7368,9701,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	100408173	100417411	chr2:100408173-100417411	0	-	100408173	100408173	8553170	3	487,71,38,	0,6867,9200,
#Partially deleted in new
chr2	100415052	100417255	chr2:100415052-100417255	0	-	100415052	100415052	8553170	3	59,303,125,	0,1170,2078,
#Partially deleted in new
chr2	100425347	100426107	chr2:100425347-100426107	7	+	100425347	100425347	16724991	1	760,	0,
#Partially deleted in new
chr2	100470481	100483280	chr2:100470481-100483280	3	+	100470488	100483264	789624	10	83,56,51,24,54,75,36,42,35,29,	0,2313,3007,6762,6879,8871,10014,10644,11795,12770,
#Deleted in new
chr2	100509276	100509612	chr2:100509276-100509612	7	+	100509276	100509276	16724991	1	336,	0,
#Partially deleted in new
chr2	100562689	100576735	chr2:100562689-100576735	3	+	100563067	100576496	789624	6	384,127,91,144,209,382,	0,3813,6241,6888,8900,13664,
#Partially deleted in new
chr2	100563257	100571632	chr2:100563257-100571632	0	+	100568947	100571632	789624	5	252,127,91,144,43,	0,3245,5673,6320,8332,
#Partially deleted in new
chr2	100568954	100572040	chr2:100568954-100572040	0	+	100568954	100571830	789624	3	67,144,451,	0,623,2635,
#Deleted in new
chr2	100591149	100591324	chr2:100591149-100591324	7	-	100591149	100591149	16724991	1	175,	0,
#Partially deleted in new
chr2	100607027	100609351	chr2:100607027-100609351	3	+	100607027	100607027	8553170	2	298,219,	0,2105,
#Partially deleted in new
chr2	100607243	100609358	chr2:100607243-100609358	0	+	100607243	100607243	8553170	2	82,356,	0,1759,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	100660198	100660678	chr2:100660198-100660678	7	+	100660198	100660198	16724991	1	480,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	100669891	100676038	chr2:100669891-100676038	3	-	100669891	100669891	8553170	2	280,282,	0,5865,
#Deleted in new
chr2	100722220	100722882	chr2:100722220-100722882	3	-	100722220	100722220	8553170	2	173,63,	0,599,
#Partially deleted in new
chr2	100820151	100996829	chr2:100820151-100996829	3	+	100904754	100995582	789624	21	263,54,149,92,90,121,114,119,83,107,148,85,142,110,90,147,198,191,93,181,1430,	0,84581,104994,112758,117601,128083,129215,143906,144709,145508,148129,150838,154651,155306,157558,162079,167927,170104,170628,173195,175248,
#Partially deleted in new
chr2	100821024	100948299	chr2:100821024-100948299	0	+	100821026	100948299	789624	6	175,54,149,92,90,65,	0,83708,104121,111885,116728,127210,
#Partially deleted in new
chr2	100822660	100847220	chr2:100822660-100847220	3	+	100822660	100822660	8553170	3	142,190,385,	0,892,24175,
#Partially deleted in new
chr2	100925145	100971049	chr2:100925145-100971049	0	+	100925145	100971049	789624	7	149,92,90,121,114,148,60,	0,7764,12607,23089,24221,43135,45844,
#Partially deleted in new
chr2	100925145	100964176	chr2:100925145-100964176	0	+	100925145	100925145	8553170	7	149,92,90,121,114,79,119,	0,7764,12607,23089,24221,37609,38912,
#Partially deleted in new
chr2	100925161	100937842	chr2:100925161-100937842	0	+	100925161	100937842	789624	3	139,92,90,	0,7748,12591,
#Partially deleted in new
chr2	100934110	100964918	chr2:100934110-100964918	0	+	100934110	100934110	8553170	6	50,90,121,114,119,58,	0,3642,14124,15256,29947,30750,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	100970600	100996055	chr2:100970600-100996055	0	+	100970600	100970600	8553170	9	474,142,110,90,6046,191,93,181,656,	0,4202,4857,7109,11630,19655,20179,22746,24799,
#Partially deleted in new
chr2	100972647	100975700	chr2:100972647-100975700	3	-	100972647	100972647	8553170	3	196,129,168,	0,2637,2885,
#Partially deleted in new
chr2	100972647	100976800	chr2:100972647-100976800	0	-	100972647	100972647	789624	3	196,129,85,	0,2637,4068,
#Partially deleted in new
chr2	100974802	100982636	chr2:100974802-100982636	0	+	100974802	100974802	8553170	5	142,110,90,147,24,	0,655,2907,7428,7810,
#Partially deleted in new
chr2	100974865	100993527	chr2:100974865-100993527	0	+	100974865	100993527	789624	5	79,110,90,147,181,	0,592,2844,7365,18481,
#Deleted in new
chr2	100975625	100977161	chr2:100975625-100977161	1	-	100975625	100975625	8553170	2	43,446,	0,1090,
#Partially deleted in new
chr2	100982253	100996055	chr2:100982253-100996055	0	+	100982253	100995816	789624	6	124,198,191,93,181,260,	0,5825,8002,8526,11093,13542,
#Partially deleted in new
chr2	100988309	100996822	chr2:100988309-100996822	0	+	100988309	100988309	8553170	4	2137,93,181,1423,	0,2470,5037,7090,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	100993675	101002244	chr2:100993675-101002244	3	-	100993675	100993675	8553170	2	2334,1151,	0,7418,
#Deleted in new
chr2	100994442	100996055	chr2:100994442-100996055	0	+	100994442	100994442	8553170	2	138,260,	0,1353,
#Partially deleted in new
chr2	101001714	101007267	chr2:101001714-101007267	3	+	101002701	101006381	0	5	601,107,126,113,918,	0,987,2443,4244,4635,
#Partially deleted in new
chr2	101002228	101004604	chr2:101002228-101004604	1	+	101002701	101004290	789624	3	87,107,447,	0,473,1929,
#Partially deleted in new
chr2	101002282	101019728	chr2:101002282-101019728	1	+	101002701	101019038	0	5	33,107,126,113,731,	0,419,1875,3676,16715,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	101002292	101018306	chr2:101002292-101018306	1	+	101002701	101017905	789624	5	23,107,126,113,448,	0,409,1865,3666,15566,
#Partially deleted in new
chr2	101002292	101006418	chr2:101002292-101006418	1	+	101002701	101006091	0	4	23,107,126,460,	0,409,1865,3666,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	101002292	101018289	chr2:101002292-101018289	1	+	101002701	101017905	789624	5	23,107,126,113,401,	0,409,1865,3666,15596,
#Partially deleted in new
chr2	101002292	101006419	chr2:101002292-101006419	1	+	101002701	101006381	0	4	516,126,113,70,	0,1865,3666,4057,
#Partially deleted in new
chr2	101002310	101006423	chr2:101002310-101006423	0	+	101002701	101004290	789624	4	5,107,204,465,	0,391,1847,3648,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	101002690	101006367	chr2:101002690-101006367	1	+	101002701	101004290	789624	2	118,2210,	0,1467,
#Partially deleted in new
chr2	101002690	101006071	chr2:101002690-101006071	0	+	101002701	101006071	789624	3	118,126,113,	0,1467,3268,
#Partially deleted in new
chr2	101002738	101024032	chr2:101002738-101024032	0	+	101002738	101023641	789624	4	70,126,113,408,	0,1419,3220,20886,
#Partially deleted in new
chr2	101007616	101151253	chr2:101007616-101151253	3	-	101007820	101151253	789624	20	657,98,90,66,241,69,99,130,286,118,215,151,177,195,208,241,229,119,111,127,	0,3312,3834,14064,14664,19766,20431,20686,21874,24651,25927,28401,29915,30844,32561,42784,46491,51804,82637,143510,
#Partially deleted in new
chr2	101007616	101151384	chr2:101007616-101151384	1	-	101007820	101151253	789624	20	657,98,90,66,241,69,99,130,286,118,215,151,177,195,208,241,229,119,156,258,	0,3312,3834,14064,14664,19766,20431,20686,21874,24651,25927,28401,29915,30844,32561,42784,46491,51804,82592,143510,
#Partially deleted in new
chr2	101011039	101022373	chr2:101011039-101022373	0	-	101011039	101011039	8553170	3	501,66,93,	0,10641,11241,
#Partially deleted in new
chr2	101028302	101032944	chr2:101028302-101032944	0	-	101028302	101028302	8553170	3	130,286,677,	0,1188,3965,
#Partially deleted in new
chr2	101028344	101029972	chr2:101028344-101029972	0	-	101028344	101028344	8553170	2	88,482,	0,1146,
#Partially deleted in new
chr2	101028466	101032481	chr2:101028466-101032481	0	-	101028466	101028466	8553170	3	73,286,214,	0,1024,3801,
#Partially deleted in new
chr2	101059451	101109963	chr2:101059451-101109963	0	-	101059451	101059451	8553170	3	88,156,129,	0,30757,50383,
#Partially deleted in new
chr2	101068377	101068656	chr2:101068377-101068656	7	+	101068377	101068377	16724991	1	279,	0,
#Partially deleted in new
chr2	101090252	101252866	chr2:101090252-101252866	0	-	101090252	101090252	8553170	5	112,95,158,91,105,	0,97981,101048,104983,162509,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	101151659	101155412	chr2:101151659-101155412	3	+	101151659	101151659	789624	2	1100,1378,	0,2375,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	101187823	101252855	chr2:101187823-101252855	0	-	101187823	101187823	8553170	4	300,95,91,94,	0,410,7412,64938,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	101187983	101252864	chr2:101187983-101252864	0	-	101187983	101187983	8553170	3	345,91,103,	0,7252,64778,
#Partially deleted in new
chr2	101252801	101270316	chr2:101252801-101270316	3	+	101252964	101269413	789624	7	677,165,153,203,203,97,1101,	0,4989,9737,12043,13875,16238,16414,
#Partially deleted in new
chr2	101262430	101266784	chr2:101262430-101266784	0	+	101262430	101262430	8553170	3	261,203,108,	0,2414,4246,
#Partially deleted in new
chr2	101264974	101269315	chr2:101264974-101269315	0	+	101264974	101269145	789624	3	73,203,276,	0,1702,4065,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	101271218	101272936	chr2:101271218-101272936	0	-	101271218	101271218	8553170	2	526,95,	0,1623,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	101271221	101308701	chr2:101271221-101308701	0	-	101273303	101308588	789624	8	523,215,199,97,83,69,251,573,	0,1905,10637,14859,17751,22792,23709,36907,
#Deleted in new
chr2	101272935	101273049	chr2:101272935-101273049	3	-	101272935	101272935	789624	1	114,	0,
#Partially deleted in new
chr2	101276090	101308696	chr2:101276090-101308696	3	-	101277237	101308588	789624	7	1191,199,97,83,69,251,568,	0,5768,9990,12882,17923,18840,32038,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	101281492	101286107	chr2:101281492-101286107	0	-	101281492	101281492	8553170	2	565,27,	0,4588,
#Partially deleted in new
chr2	101281858	101286503	chr2:101281858-101286503	0	-	101281858	101281858	8553170	2	199,423,	0,4222,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	101288707	101294662	chr2:101288707-101294662	0	-	101288707	101288707	8553170	2	348,649,	0,5306,
#Deleted in new
chr2	101309449	101309534	chr2:101309449-101309534	3	+	101309449	101309449	5263520	1	85,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	101345550	101387595	chr2:101345550-101387595	3	-	101350922	101387457	789624	4	5520,114,170,579,	0,9702,37982,41466,
#Deleted in new
chr2	101375586	101376055	chr2:101375586-101376055	7	+	101375586	101375586	16724991	1	469,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	101382078	101387140	chr2:101382078-101387140	0	-	101382078	101382078	8553170	3	612,170,124,	0,1454,4938,
#Partially deleted in new
chr2	101382925	101387466	chr2:101382925-101387466	0	-	101382925	101382925	8553170	3	155,170,450,	0,607,4091,
#Partially deleted in new
chr2	101397360	101474703	chr2:101397360-101474703	0	-	101421711	101466848	789624	14	364,317,115,95,157,151,114,78,111,64,87,62,124,68,	0,5075,8582,13258,15554,20173,21490,24339,25001,31595,53233,55024,69416,77275,
#Partially deleted in new
chr2	101397360	101474703	chr2:101397360-101474703	3	-	101397547	101466848	789624	15	364,317,115,95,157,59,151,114,54,111,64,87,62,124,68,	0,5075,8582,13258,15554,17493,20173,21490,24363,25001,31595,53233,55024,69416,77275,
#Partially deleted in new
chr2	101397403	101474703	chr2:101397403-101474703	1	-	101397547	101466848	789624	12	321,317,115,95,157,59,151,114,54,111,124,68,	0,5032,8539,13215,15511,17450,20130,21447,24320,24958,69373,77232,
#Partially deleted in new
chr2	101397403	101474504	chr2:101397403-101474504	1	-	101397547	101474275	789624	12	321,317,115,95,157,59,151,114,54,111,124,303,	0,5032,8539,13215,15511,17450,20130,21447,24320,24958,69373,76798,
#Partially deleted in new
chr2	101421382	101435106	chr2:101421382-101435106	0	-	101421382	101421382	8553170	3	395,111,268,	0,979,13456,
#Partially deleted in new
chr2	101421697	101474701	chr2:101421697-101474701	0	-	101422450	101466848	789624	6	80,111,87,62,124,66,	0,664,28896,30687,45079,52938,
#Partially deleted in new
chr2	101479389	101486822	chr2:101479389-101486822	3	+	101479389	101479389	8553170	3	104,197,89,	0,6029,7344,
#Deleted in new
chr2	101509529	101510222	chr2:101509529-101510222	7	-	101509529	101509529	16724991	1	693,	0,
#Deleted in new
chr2	101520833	101521976	chr2:101520833-101521976	7	-	101520833	101520833	16724991	1	1143,	0,
#Partially deleted in new
chr2	101696849	101824053	chr2:101696849-101824053	0	+	101698080	101824053	789624	5	215,62,66,57,126,	0,1226,1623,93870,127078,
#Partially deleted in new
chr2	101697702	101894689	chr2:101697702-101894689	1	+	101698080	101891249	789624	30	435,66,57,126,111,91,131,55,79,176,73,211,162,87,129,231,107,152,107,176,121,118,171,144,135,101,150,160,140,3524,	0,770,93017,126225,127616,131801,134018,136706,138197,142116,144906,146398,158274,161293,162033,166118,167227,168725,169509,171919,172592,175944,176379,179300,184848,187484,189385,190075,191093,193463,
#Partially deleted in new
chr2	101697702	101894689	chr2:101697702-101894689	1	+	101698080	101891249	789624	29	435,66,57,126,111,91,131,55,79,176,73,211,162,87,129,107,149,107,176,121,118,171,144,135,101,174,160,140,3524,	0,770,93017,126225,127616,131801,134018,136706,138197,142116,144906,146398,158274,161293,162033,167227,168728,169509,171919,172592,175944,176379,179300,184848,187484,189385,190075,191093,193463,
#Partially deleted in new
chr2	101697702	101894689	chr2:101697702-101894689	1	+	101698080	101891249	0	31	435,66,57,126,111,91,131,55,79,176,73,211,162,87,129,162,107,152,98,176,121,192,118,171,144,135,101,150,160,140,3524,	0,770,93017,126225,127616,131801,134018,136706,138197,142116,144906,146398,158274,161293,162033,163122,167227,168725,169509,171919,172592,173791,175944,176379,179300,184848,187484,189385,190075,191093,193463,
#Partially deleted in new
chr2	101697743	101891496	chr2:101697743-101891496	1	+	101698080	101891249	789624	31	394,66,57,126,111,91,131,55,79,176,73,211,162,87,129,162,107,149,98,176,121,192,118,171,144,135,101,150,160,140,331,	0,729,92976,126184,127575,131760,133977,136665,138156,142075,144865,146357,158233,161252,161992,163081,167186,168687,169468,171878,172551,173750,175903,176338,179259,184807,187443,189344,190034,191052,193422,
#Partially deleted in new
chr2	101698025	101894689	chr2:101698025-101894689	1	+	101790761	101891249	789624	26	112,66,57,126,111,91,73,211,162,87,222,107,152,98,9,176,121,118,171,144,135,101,150,160,140,3524,	0,447,92694,125902,127293,131478,144583,146075,157951,160970,161617,166904,168402,169186,170003,171596,172269,175621,176056,178977,184525,187161,189062,189752,190770,193140,
#Partially deleted in new
chr2	101698025	101894687	chr2:101698025-101894687	1	+	101698080	101891249	789624	29	112,66,57,126,111,91,131,55,79,176,73,211,162,87,129,107,149,98,176,121,118,171,144,135,101,150,160,140,3522,	0,447,92694,125902,127293,131478,133695,136383,137874,141793,144583,146075,157951,160970,161710,166904,168405,169186,171596,172269,175621,176056,178977,184525,187161,189062,189752,190770,193140,
#Partially deleted in new
chr2	101698025	101894689	chr2:101698025-101894689	1	+	101698080	101891249	789624	31	112,66,57,126,111,91,131,55,79,176,73,211,162,87,222,162,231,107,152,107,176,121,118,171,144,135,101,150,160,140,3524,	0,447,92694,125902,127293,131478,133695,136383,137874,141793,144583,146075,157951,160970,161617,162799,165795,166904,168402,169186,171596,172269,175621,176056,178977,184525,187161,189062,189752,190770,193140,
#Partially deleted in new
chr2	101698025	101891496	chr2:101698025-101891496	1	+	101698080	101891249	0	30	112,66,57,126,111,91,131,55,79,176,73,211,162,87,129,107,149,98,9,176,121,118,171,144,135,101,174,160,140,331,	0,447,92694,125902,127293,131478,133695,136383,137874,141793,144583,146075,157951,160970,161710,166904,168405,169186,170003,171596,172269,175621,176056,178977,184525,187161,189062,189752,190770,193140,
#Partially deleted in new
chr2	101698080	101891321	chr2:101698080-101891321	1	+	101698080	101891249	0	30	57,66,57,126,111,91,131,55,79,176,73,211,162,87,222,162,107,149,98,176,121,118,171,144,135,101,150,160,140,156,	0,392,92639,125847,127238,131423,133640,136328,137819,141738,144528,146020,157896,160915,161562,162744,166849,168350,169131,171541,172214,175566,176001,178922,184470,187106,189007,189697,190715,193085,
#Partially deleted in new
chr2	101698080	101891987	chr2:101698080-101891987	1	+	101698080	101891249	789624	25	57,66,57,126,111,91,73,211,162,87,222,107,149,98,176,121,118,171,144,135,101,150,160,140,822,	0,392,92639,125847,127238,131423,144528,146020,157896,160915,161562,166849,168350,169131,171541,172214,175566,176001,178922,184470,187106,189007,189697,190715,193085,
#Partially deleted in new
chr2	101698080	101891249	chr2:101698080-101891249	1	+	101698080	101891249	789624	25	57,66,57,126,111,91,73,211,162,87,222,107,152,119,170,121,118,171,144,135,101,150,160,140,84,	0,392,92639,125847,127238,131423,144528,146020,157896,160915,161562,166849,168347,169131,171547,172214,175566,176001,178922,184470,187106,189007,189697,190715,193085,
#Partially deleted in new
chr2	101698529	101891987	chr2:101698529-101891987	2	+	101698529	101891249	789624	29	9,57,126,111,91,131,55,79,176,73,211,162,87,129,162,107,149,98,176,121,118,171,144,135,101,150,160,140,822,	0,92190,125398,126789,130974,133191,135879,137370,141289,144079,145571,157447,160466,161206,162295,166400,167901,168682,171092,171765,175117,175552,178473,184021,186657,188558,189248,190266,192636,
#Partially deleted in new
chr2	101797233	101831816	chr2:101797233-101831816	0	+	101797233	101797233	8553170	5	150,126,111,91,96,	0,26694,28085,32270,34487,
#Deleted in new
chr2	101825318	101829754	chr2:101825318-101829754	0	+	101825318	101825318	8553170	2	111,251,	0,4185,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	101825401	101862240	chr2:101825401-101862240	0	+	101825401	101825401	8553170	11	28,91,131,55,79,176,73,211,162,87,2505,	0,4102,6319,9007,10498,14417,17207,18699,30575,33594,34334,
#Partially deleted in new
chr2	101839827	101891496	chr2:101839827-101891496	0	+	101839827	101891249	789624	22	167,73,211,162,87,222,162,231,107,149,98,176,121,118,171,144,135,101,150,160,140,331,	0,2781,4273,16149,19168,19815,20997,23993,25102,26603,27384,29794,30467,33819,34254,37175,42723,45359,47260,47950,48968,51338,
#Partially deleted in new
chr2	101855976	101865003	chr2:101855976-101865003	0	+	101855976	101865003	789624	5	162,87,222,231,74,	0,3019,3666,7844,8953,
#Partially deleted in new
chr2	101866492	101867730	chr2:101866492-101867730	0	+	101866492	101866492	8553170	2	87,519,	0,719,
#Deleted in new
chr2	101867535	101870633	chr2:101867535-101870633	0	+	101867535	101867535	8553170	3	502,176,339,	0,2086,2759,
#Deleted in new
chr2	101867855	101870085	chr2:101867855-101870085	0	+	101867855	101867855	8553170	2	182,464,	0,1766,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	101962055	101987167	chr2:101962055-101987167	3	+	101962055	101962055	8553170	3	113,138,3476,	0,2644,21636,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	101983464	101985105	chr2:101983464-101985105	0	+	101983464	101983464	8553170	3	114,130,522,	0,227,1119,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	101983467	101984170	chr2:101983467-101984170	0	+	101983467	101983467	8553170	2	111,479,	0,224,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	101983763	101985545	chr2:101983763-101985545	0	+	101983763	101983763	8553170	3	58,121,398,	0,820,1384,
#Deleted in new
chr2	101983763	101985304	chr2:101983763-101985304	0	+	101983763	101983763	8553170	3	58,354,157,	0,820,1384,
#Partially deleted in new
chr2	101991843	102028544	chr2:101991843-102028544	3	+	102008575	102028392	0	9	168,128,265,181,175,63,136,143,319,	0,16671,17718,24027,27794,30343,32689,34267,36382,
#Partially deleted in new
chr2	101991959	102009968	chr2:101991959-102009968	0	+	101991959	101991959	8553170	3	74,128,407,	0,16555,17602,
#Partially deleted in new
chr2	101991959	102010185	chr2:101991959-102010185	0	+	101991959	101991959	8553170	3	52,128,624,	0,16555,17602,
#Partially deleted in new
chr2	101998994	102028417	chr2:101998994-102028417	1	+	102008575	102028392	0	9	122,128,265,181,175,63,136,143,192,	0,9520,10567,16876,20643,23192,25538,27116,29231,
#Partially deleted in new
chr2	102001984	102019812	chr2:102001984-102019812	0	+	102008575	102019812	789624	5	43,128,265,181,175,	0,6530,7577,13886,17653,
#Partially deleted in new
chr2	102008514	102024826	chr2:102008514-102024826	1	+	102008575	102024672	0	6	128,265,181,175,63,294,	0,1047,7356,11123,13672,16018,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	102009561	102016486	chr2:102009561-102016486	0	+	102009561	102009561	8553170	2	265,616,	0,6309,
#Partially deleted in new
chr2	102022062	102028414	chr2:102022062-102028414	0	+	102022062	102022062	8553170	4	187,136,143,189,	0,2470,4048,6163,
#Partially deleted in new
chr2	102023389	102028417	chr2:102023389-102028417	0	+	102023389	102023389	8553170	4	232,136,143,192,	0,1143,2721,4836,
#Partially deleted in new
chr2	102064543	102164953	chr2:102064543-102164953	0	+	102157724	102164953	789624	5	103,182,77,67,180,	0,5089,89397,93175,100230,
#Partially deleted in new
chr2	102070375	102176759	chr2:102070375-102176759	1	+	102157724	102176759	789624	12	158,77,67,235,190,169,66,118,152,144,75,407,	0,83565,87343,94398,94739,95737,98222,101425,102311,104211,105195,105977,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	102070375	102176759	chr2:102070375-102176759	1	+	102157724	102175686	789624	11	158,77,67,235,190,169,66,118,152,144,1282,	0,83565,87343,94398,94739,95737,98222,101425,102311,104211,105102,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	102104562	102179866	chr2:102104562-102179866	1	+	102157724	102177237	789624	6	310,77,67,235,190,2665,	0,49378,53156,60211,60552,72639,
#Partially deleted in new
chr2	102104568	102175817	chr2:102104568-102175817	3	+	102157724	102175686	789624	11	304,77,67,235,190,169,66,118,152,144,340,	0,49372,53150,60205,60546,61544,64029,67232,68118,70018,70909,
#Partially deleted in new
chr2	102141770	102165136	chr2:102141770-102165136	0	+	102157724	102165136	789624	5	148,77,67,235,22,	0,12170,15948,23003,23344,
#Partially deleted in new
chr2	102141818	102176377	chr2:102141818-102176377	0	+	102165250	102176377	789624	11	181,77,235,190,169,66,118,152,144,168,25,	0,12122,22955,23296,24294,26779,29982,30868,32768,33659,34534,
#Partially deleted in new
chr2	102142305	102165162	chr2:102142305-102165162	0	+	102157724	102165162	789624	5	150,77,67,235,48,	0,11635,15413,22468,22809,
#Partially deleted in new
chr2	102142785	102175759	chr2:102142785-102175759	1	+	102157724	102175686	789624	11	235,77,67,235,190,169,66,118,152,144,282,	0,11155,14933,21988,22329,23327,25812,29015,29901,31801,32692,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	102142785	102179874	chr2:102142785-102179874	1	+	102157724	102176759	0	12	235,77,67,235,190,169,66,118,152,144,168,3522,	0,11155,14933,21988,22329,23327,25812,29015,29901,31801,32692,33567,
#Partially deleted in new
chr2	102153948	102176842	chr2:102153948-102176842	0	+	102157724	102166176	789624	10	69,67,235,169,66,118,152,144,168,490,	0,3770,10825,12164,14649,17852,18738,20638,21529,22404,
#Partially deleted in new
chr2	102153962	102166173	chr2:102153962-102166173	0	+	102157724	102166173	789624	6	55,101,67,235,190,61,	0,2183,3756,10811,11152,12150,
#Partially deleted in new
chr2	102164773	102171829	chr2:102164773-102171829	0	+	102164773	102166176	789624	5	230,80,169,66,29,	0,451,1339,3824,7027,
#Partially deleted in new
chr2	102172620	102182108	chr2:102172620-102182108	3	-	102172620	102172620	8553170	3	77,90,215,	0,7291,9273,
#Partially deleted in new
chr2	102186972	102240002	chr2:102186972-102240002	3	+	102187867	102239241	789624	12	114,70,235,196,160,75,130,137,144,162,381,811,	0,883,2103,4952,14583,25127,31980,32908,38925,45990,47924,52219,
#Partially deleted in new
chr2	102187005	102239338	chr2:102187005-102239338	0	+	102187005	102187005	8553170	10	81,70,160,75,130,137,144,162,381,147,	0,850,14550,25094,31947,32875,38892,45957,47891,52186,
#Partially deleted in new
chr2	102187014	102239351	chr2:102187014-102239351	1	+	102187014	102239241	789624	10	68,70,160,72,130,137,144,162,381,160,	0,841,14541,25088,31938,32866,38883,45948,47882,52177,
#Partially deleted in new
chr2	102187313	102201582	chr2:102187313-102201582	0	+	102187867	102201582	789624	5	29,70,235,196,27,	0,542,1762,4611,14242,
#Deleted in new
chr2	102249856	102250255	chr2:102249856-102250255	7	-	102249856	102249856	16724991	1	399,	0,
#Partially deleted in new
chr2	102311501	102352037	chr2:102311501-102352037	3	+	102338264	102351921	0	11	122,210,211,175,163,72,142,146,147,168,502,	0,26614,27335,28596,29164,30721,31534,31768,36443,37577,40034,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	102311501	102346099	chr2:102311501-102346099	1	+	102340176	102343432	0	7	122,67,175,163,72,142,2830,	0,27479,28596,29164,30721,31534,31768,
#Partially deleted in new
chr2	102311528	102396886	chr2:102311528-102396886	0	+	102362660	102396883	0	11	95,86,244,166,157,63,121,140,162,159,356,	0,51104,56296,60424,64378,70091,73349,75332,78527,82940,85002,
#Partially deleted in new
chr2	102311528	102340196	chr2:102311528-102340196	0	+	102311528	102311528	8553170	4	95,210,186,99,	0,26587,27308,28569,
#Partially deleted in new
chr2	102311567	102338891	chr2:102311567-102338891	0	+	102338264	102338891	789624	5	56,139,85,210,55,	0,1341,1784,26548,27269,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	102337147	102346100	chr2:102337147-102346100	1	+	102338264	102343432	0	8	190,210,211,175,163,72,142,2831,	0,968,1689,2950,3518,5075,5888,6122,
#Deleted in new
chr2	102337249	102339466	chr2:102337249-102339466	0	+	102337249	102337249	8553170	2	88,630,	0,1587,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	102337257	102344951	chr2:102337257-102344951	1	+	102338264	102343432	789624	8	80,210,211,175,163,72,100,1682,	0,858,1579,2840,3408,4965,5820,6012,
#Partially deleted in new
chr2	102337280	102343109	chr2:102337280-102343109	0	+	102337280	102337280	8553170	5	57,211,175,72,32,	0,1556,2817,4942,5797,
#Partially deleted in new
chr2	102337287	102343756	chr2:102337287-102343756	0	+	102338264	102341357	0	9	50,210,211,175,163,170,72,142,487,	0,828,1549,2810,3378,3900,4935,5748,5982,
#Partially deleted in new
chr2	102355928	102398758	chr2:102355928-102398758	3	+	102362660	102396886	0	12	210,118,86,244,166,157,63,121,140,162,159,2228,	0,354,6704,11896,16024,19978,25691,28949,30932,34127,38540,40602,
#Partially deleted in new
chr2	102356044	102362916	chr2:102356044-102362916	0	+	102356044	102356044	8553170	2	356,284,	0,6588,
#Partially deleted in new
chr2	102356282	102398775	chr2:102356282-102398775	1	+	102362660	102396886	0	11	118,86,244,166,157,63,121,140,162,159,2245,	0,6350,11542,15670,19624,25337,28595,30578,33773,38186,40248,
#Deleted in new
chr2	102411242	102412108	chr2:102411242-102412108	7	+	102411242	102411242	16724991	1	866,	0,
#Partially deleted in new
chr2	102418688	102452565	chr2:102418688-102452565	3	+	102423277	102452181	0	12	252,237,170,325,184,151,66,124,152,138,174,800,	0,872,4489,5122,5542,18523,22623,24511,26500,28381,32159,33077,
#Deleted in new
chr2	102419444	102423874	chr2:102419444-102423874	0	+	102423277	102423874	789624	3	353,170,64,	0,3733,4366,
#Partially deleted in new
chr2	102419685	102452384	chr2:102419685-102452384	1	+	102424261	102452181	0	10	112,170,184,151,66,124,152,138,174,619,	0,3492,4545,17526,21626,23514,25503,27384,31162,32080,
#Deleted in new
chr2	102423155	102424190	chr2:102423155-102424190	0	+	102423155	102423155	8553170	2	192,380,	0,655,
#Deleted in new
chr2	102432288	102432366	chr2:102432288-102432366	3	+	102432288	102432288	5263520	1	78,	0,
#Deleted in new
chr2	102433956	102435340	chr2:102433956-102435340	3	+	102433956	102433956	8553170	2	334,866,	0,518,
#Deleted in new
chr2	102438712	102440475	chr2:102438712-102440475	3	+	102438712	102438712	8553170	3	83,361,883,	0,225,880,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	102473302	102533972	chr2:102473302-102533972	3	+	102473759	102532688	789624	12	713,464,260,218,203,87,71,162,97,132,88,1643,	0,5536,30145,31951,34776,35544,38900,40787,46556,51721,52956,59027,
#Partially deleted in new
chr2	102503441	102505805	chr2:102503441-102505805	0	+	102503441	102503441	8553170	2	266,552,	0,1812,
#Partially deleted in new
chr2	102619706	102711318	chr2:102619706-102711318	3	+	102619848	102708489	789624	12	431,464,251,218,203,90,71,162,97,132,91,3200,	0,37857,45393,63554,64427,74707,75336,81363,82699,84837,86139,88412,
#Partially deleted in new
chr2	102684297	102686768	chr2:102684297-102686768	0	+	102684297	102684297	8553170	2	39,359,	0,2112,
#Partially deleted in new
chr2	102689693	102702451	chr2:102689693-102702451	0	+	102689693	102689693	8553170	6	97,90,71,118,162,46,	0,4720,5349,7656,11376,12712,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	102715839	102736854	chr2:102715839-102736854	3	-	102718419	102736810	789624	6	3368,210,130,44,88,209,	0,7860,11005,15185,16482,20806,
#Partially deleted in new
chr2	102715839	102718334	chr2:102715839-102718334	0	-	102715839	102715839	8553170	2	202,145,	0,2350,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	102717037	102736878	chr2:102717037-102736878	0	-	102732112	102736810	789624	7	2170,210,130,44,115,88,233,	0,6662,9807,13987,14986,15284,19608,
#Partially deleted in new
chr2	102717570	102736878	chr2:102717570-102736878	0	-	102732077	102736810	789624	7	1637,210,130,44,115,71,233,	0,6129,9274,13454,14453,14751,19075,
#Partially deleted in new
chr2	102718813	102736878	chr2:102718813-102736878	0	-	102732112	102736810	789624	7	394,179,130,44,115,88,233,	0,4886,8031,12211,13210,13508,17832,
#Partially deleted in new
chr2	102719003	102732340	chr2:102719003-102732340	0	-	102723831	102732340	789624	5	204,179,130,44,19,	0,4696,7841,12021,13318,
#Partially deleted in new
chr2	102726917	102736888	chr2:102726917-102736888	0	-	102736609	102736810	789624	4	57,44,88,359,	0,4107,5404,9612,
#Deleted in new
chr2	102732285	102736839	chr2:102732285-102736839	0	-	102732285	102732285	8553170	2	141,194,	0,4360,
#Partially deleted in new
chr2	102736904	102933463	chr2:102736904-102933463	1	+	102764384	102933006	789624	5	109,100,99,138,579,	0,25682,27424,60958,195980,
#Partially deleted in new
chr2	102736907	102817416	chr2:102736907-102817416	1	+	102764384	102814968	789624	5	106,100,99,138,2669,	0,25679,27421,60955,77840,
#Partially deleted in new
chr2	102736907	102797900	chr2:102736907-102797900	0	+	102758470	102797900	789624	6	106,127,85,100,99,38,	0,20505,21481,25679,27421,60955,
#Partially deleted in new
chr2	102736910	102817420	chr2:102736910-102817420	3	+	102758470	102814968	789624	6	103,85,100,99,138,2673,	0,21478,25676,27418,60952,77837,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	102736931	102775518	chr2:102736931-102775518	0	+	102736931	102736931	8553170	4	82,100,99,389,	0,25655,27397,38198,
#Partially deleted in new
chr2	102736945	102815104	chr2:102736945-102815104	0	+	102736945	102736945	8553170	4	68,100,99,357,	0,25641,27383,77802,
#Partially deleted in new
chr2	102761962	103019900	chr2:102761962-103019900	1	+	102764384	102965691	789624	6	387,100,99,138,80,351,	0,624,2366,35900,203691,257587,
#Partially deleted in new
chr2	102762012	102817666	chr2:102762012-102817666	1	+	102762217	102814968	789624	5	337,100,99,138,2919,	0,574,2316,35850,52735,
#Partially deleted in new
chr2	102762598	102843893	chr2:102762598-102843893	0	+	102762598	102762598	8553170	4	88,99,138,482,	0,1730,35264,80813,
#Partially deleted in new
chr2	102797765	102816316	chr2:102797765-102816316	0	+	102797765	102797765	8553170	2	235,1569,	0,16982,
#Partially deleted in new
chr2	102873338	102895722	chr2:102873338-102895722	3	-	102873338	102873338	789624	4	242,172,205,90,	0,17924,21234,22294,
#Partially deleted in new
chr2	102967407	102984429	chr2:102967407-102984429	3	-	102967407	102967407	789624	4	98,118,147,74,	0,1529,3433,16948,
#Deleted in new
chr2	102987322	102988565	chr2:102987322-102988565	3	+	102987322	102987322	8553170	3	56,120,373,	0,171,870,
#Partially deleted in new
chr2	103011778	103019898	chr2:103011778-103019898	0	+	103011778	103011778	8553170	2	129,349,	0,7771,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	103109758	103176260	chr2:103109758-103176260	3	-	103109758	103109758	8553170	4	319,106,148,65,	0,7041,65748,66437,
#Deleted in new
chr2	103275903	103276138	chr2:103275903-103276138	7	+	103275903	103275903	16724991	1	235,	0,
#Partially deleted in new
chr2	103494240	103495842	chr2:103494240-103495842	7	+	103494240	103494240	16724991	2	998,286,	0,1316,
#Partially deleted in new
chr2	103527619	103529261	chr2:103527619-103529261	7	+	103527619	103527619	16724991	2	1144,175,	0,1467,
#Partially deleted in new
chr2	103623629	103623830	chr2:103623629-103623830	7	+	103623629	103623629	16724991	1	201,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	103856658	103865965	chr2:103856658-103865965	1	-	103856658	103856658	8553170	5	228,110,169,88,244,	0,495,2816,3463,9063,
#Partially deleted in new
chr2	103856969	103880209	chr2:103856969-103880209	3	-	103856969	103856969	8553170	3	294,88,198,	0,3152,23042,
#Partially deleted in new
chr2	103865745	103869688	chr2:103865745-103869688	3	-	103865745	103865745	8553170	4	239,133,101,72,	0,883,3449,3871,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	103874309	104077604	chr2:103874309-104077604	3	+	103874309	103874309	8553170	4	136,117,159,140,	0,179194,197821,203155,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	103874330	104077778	chr2:103874330-104077778	0	+	103874330	103874330	8553170	3	115,117,314,	0,179173,203134,
#Deleted in new
chr2	103953097	103953284	chr2:103953097-103953284	3	-	103953097	103953097	8553170	1	187,	0,
#Partially deleted in new
chr2	104051881	104058336	chr2:104051881-104058336	0	+	104051881	104051881	8553170	3	96,117,339,	0,1622,6116,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	104051974	104077523	chr2:104051974-104077523	1	+	104051974	104051974	8553170	3	399,117,59,	0,1529,25490,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	104053501	104059256	chr2:104053501-104059256	1	+	104053501	104053501	8553170	2	119,1259,	0,4496,
#Partially deleted in new
chr2	104125267	104147229	chr2:104125267-104147229	3	-	104125267	104125267	8553170	5	22,73,215,147,72,	0,849,18828,20536,21890,
#Deleted in new
chr2	104395001	104396280	chr2:104395001-104396280	7	-	104395001	104395001	16724991	1	1279,	0,
#Deleted in new
chr2	104411200	104415612	chr2:104411200-104415612	3	+	104411200	104411200	8553170	2	279,192,	0,4220,
#Deleted in new
chr2	104412226	104414008	chr2:104412226-104414008	3	-	104412226	104412226	789624	2	443,50,	0,1732,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	104433266	104520832	chr2:104433266-104520832	3	+	104433266	104433266	8553170	4	1257,1541,343,637,	0,72599,84792,86929,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	104434361	104507831	chr2:104434361-104507831	0	+	104434361	104434361	8553170	2	162,1966,	0,71504,
#Partially deleted in new
chr2	104434365	104506105	chr2:104434365-104506105	0	+	104434365	104434365	8553170	3	158,180,240,	0,1574,71500,
#Partially deleted in new
chr2	104434377	104512757	chr2:104434377-104512757	0	+	104434377	104434377	789624	4	146,438,175,715,	0,71488,72854,77665,
#Deleted in new
chr2	104580820	104581890	chr2:104580820-104581890	3	-	104580820	104580820	8553170	2	368,69,	0,1001,
#Deleted in new
chr2	104583151	104585354	chr2:104583151-104585354	3	+	104583151	104583151	8553170	2	172,279,	0,1924,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	104659336	104664837	chr2:104659336-104664837	3	+	104659336	104659336	8553170	4	184,151,152,74,	0,2165,3408,5427,
#Deleted in new
chr2	104678222	104678673	chr2:104678222-104678673	7	+	104678222	104678222	16724991	1	451,	0,
#Deleted in new
chr2	104703757	104705509	chr2:104703757-104705509	3	+	104703757	104703757	8553170	2	50,659,	0,1093,
#Deleted in new
chr2	104706611	104707506	chr2:104706611-104707506	3	+	104706611	104706611	8553170	1	895,	0,
#Deleted in new
chr2	104733233	104733362	chr2:104733233-104733362	3	+	104733233	104733233	8553170	1	129,	0,
#Partially deleted in new
chr2	104746637	104755755	chr2:104746637-104755755	1	-	104746637	104746637	8553170	3	514,168,1430,	0,2684,7688,
#Partially deleted in new
chr2	104746639	104757719	chr2:104746639-104757719	3	-	104746639	104746639	789624	4	512,168,115,1639,	0,2682,7686,9441,
#Partially deleted in new
chr2	104749383	104754875	chr2:104749383-104754875	1	-	104749383	104749383	8553170	3	106,336,40,	0,4942,5452,
#Deleted in new
chr2	104771281	104771885	chr2:104771281-104771885	7	+	104771281	104771281	16724991	1	604,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	104807571	104851461	chr2:104807571-104851461	0	-	104807571	104807571	789624	4	272,186,29,150,	0,4861,5137,43740,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	104807572	104851453	chr2:104807572-104851453	0	-	104807572	104807572	789624	4	271,186,76,142,	0,4860,5136,43739,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	104807572	104853183	chr2:104807572-104853183	0	-	104807572	104807572	789624	4	271,186,76,74,	0,4860,5136,45537,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	104807576	104851476	chr2:104807576-104851476	0	-	104807576	104807576	789624	4	267,186,104,165,	0,4856,5132,43735,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	104807576	104851458	chr2:104807576-104851458	3	-	104807576	104807576	8553170	4	267,186,147,147,	0,4856,5132,43735,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	104853284	104926052	chr2:104853284-104926052	3	+	104853284	104853284	8553170	3	285,60,98,	0,488,72670,
#Deleted in new
chr2	104855510	104858574	chr2:104855510-104858574	3	+	104855510	104857013	789624	1	3064,	0,
#Deleted in new
chr2	104865406	104867496	chr2:104865406-104867496	3	-	104865406	104865406	8553170	4	209,22,38,58,	0,404,1235,2032,
#Deleted in new
chr2	104865496	104872452	chr2:104865496-104872452	3	-	104865496	104865496	789624	2	2896,207,	0,6749,
#Deleted in new
chr2	104869845	104872595	chr2:104869845-104872595	0	-	104869845	104869845	8553170	2	105,350,	0,2400,
#Partially deleted in new
chr2	104936240	105038496	chr2:104936240-105038496	3	-	104936240	104936240	789624	3	525,74,43,	0,8763,102213,
#Partially deleted in new
chr2	105037982	105099960	chr2:105037982-105099960	3	+	105038092	105099761	0	11	245,180,63,31,80,86,76,169,109,170,291,	0,11188,33330,33476,42000,51001,51937,54418,55547,59172,61687,
#Partially deleted in new
chr2	105089017	105097288	chr2:105089017-105097288	0	+	105089017	105091366	789624	6	52,76,112,169,109,134,	0,902,2304,3383,4512,8137,
#Partially deleted in new
chr2	105092097	105099900	chr2:105092097-105099900	0	+	105092097	105092097	8553170	4	472,109,170,231,	0,1432,5057,7572,
#Partially deleted in new
chr2	105097051	105098637	chr2:105097051-105098637	0	-	105097051	105097051	8553170	3	347,64,36,	0,1147,1550,
#Partially deleted in new
chr2	105097059	105102944	chr2:105097059-105102944	3	-	105097059	105097059	789624	4	339,64,53,109,	0,1139,2188,5776,
#Deleted in new
chr2	105144112	105145222	chr2:105144112-105145222	1	+	105144112	105144112	8553170	2	63,734,	0,376,
#Deleted in new
chr2	105144122	105144912	chr2:105144122-105144912	0	+	105144122	105144122	8553170	2	53,462,	0,328,
#Deleted in new
chr2	105144141	105145424	chr2:105144141-105145424	3	+	105144141	105144141	789624	3	34,207,174,	0,347,1109,
#Deleted in new
chr2	105241742	105243049	chr2:105241742-105243049	3	+	105241858	105242977	789624	1	1307,	0,
#Deleted in new
chr2	105249403	105249794	chr2:105249403-105249794	3	-	105249403	105249403	8553170	1	391,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	105264390	105308321	chr2:105264390-105308321	1	-	105267382	105308301	789624	11	3169,434,160,147,144,58,342,83,155,195,708,	0,4881,8464,9153,11169,13223,15991,19925,31965,34120,43223,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	105264413	105330034	chr2:105264413-105330034	3	-	105267382	105308301	789624	12	3146,434,160,147,144,58,342,83,155,195,705,410,	0,4858,8441,9130,11146,13200,15968,19902,31942,34097,43200,65211,
#Partially deleted in new
chr2	105267120	105308321	chr2:105267120-105308321	1	-	105267382	105308301	789624	12	38,363,434,160,147,144,58,342,83,155,195,708,	0,76,2151,5734,6423,8439,10493,13261,17195,29235,31390,40493,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	105324209	105330529	chr2:105324209-105330529	3	+	105324209	105324209	8553170	4	76,101,65,432,	0,812,3027,5888,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	105334026	105337475	chr2:105334026-105337475	3	-	105334026	105334026	8553170	1	3449,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	105337358	105349211	chr2:105337358-105349211	3	+	105337587	105345371	789624	4	328,167,376,3897,	0,2224,5489,7956,
#Partially deleted in new
chr2	105337531	105345596	chr2:105337531-105345596	1	+	105337587	105345371	789624	5	155,167,127,123,282,	0,2051,5316,5569,7783,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	105357711	105399667	chr2:105357711-105399667	1	-	105361282	105399545	789624	6	3723,187,170,175,180,446,	0,5573,9858,15847,28649,41510,
#Partially deleted in new
chr2	105360811	105399224	chr2:105360811-105399224	1	-	105361282	105399096	789624	7	623,187,170,175,180,51,383,	0,2473,6758,12747,25549,35835,38030,
#Partially deleted in new
chr2	105360825	105438503	chr2:105360825-105438503	3	-	105361282	105386516	0	6	609,187,170,175,180,105,	0,2459,6744,12733,25535,77573,
#Partially deleted in new
chr2	105360825	105399051	chr2:105360825-105399051	1	-	105361282	105386516	0	6	609,187,170,175,180,210,	0,2459,6744,12733,25535,38016,
#Partially deleted in new
chr2	105360827	105399061	chr2:105360827-105399061	1	-	105361282	105386516	0	7	607,187,170,175,180,51,92,	0,2457,6742,12731,25533,35819,38142,
#Partially deleted in new
chr2	105360827	105399224	chr2:105360827-105399224	1	-	105363341	105386516	0	6	607,187,170,180,51,383,	0,2457,6742,25533,35819,38014,
#Partially deleted in new
chr2	105360856	105396957	chr2:105360856-105396957	1	-	105361282	105386516	0	6	578,187,170,175,180,311,	0,2428,6713,12702,25504,35790,
#Partially deleted in new
chr2	105360860	105399050	chr2:105360860-105399050	1	-	105361282	105386516	0	6	574,187,170,175,180,81,	0,2424,6709,12698,25500,38109,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	105363037	105378839	chr2:105363037-105378839	3	+	105363037	105363037	8553170	3	40,882,1122,	0,12830,14680,
#Partially deleted in new
chr2	105363283	105396697	chr2:105363283-105396697	0	-	105378108	105386516	789624	6	188,170,175,122,180,51,	0,4286,10275,14712,23077,33363,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	105374092	105376083	chr2:105374092-105376083	1	+	105374092	105374092	8553170	4	122,74,369,216,	0,351,1167,1775,
#Partially deleted in new
chr2	105385896	105438513	chr2:105385896-105438513	1	-	105386318	105386516	789624	2	644,115,	0,52502,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	105386457	105396785	chr2:105386457-105396785	0	-	105386457	105386516	789624	3	83,352,139,	0,3418,10189,
#Partially deleted in new
chr2	105744896	105894274	chr2:105744896-105894274	3	+	105855063	105893176	0	5	242,184,242,722,1293,	0,71533,110151,136431,148085,
#Partially deleted in new
chr2	105745062	105894274	chr2:105745062-105894274	1	+	105855063	105893007	789624	4	76,184,242,1293,	0,71367,109985,147919,
#Partially deleted in new
chr2	105745730	105881534	chr2:105745730-105881534	0	+	105855063	105881534	789624	4	157,184,242,207,	0,70699,109317,135597,
#Partially deleted in new
chr2	105816557	105893176	chr2:105816557-105893176	1	+	105855063	105893007	789624	3	56,239,195,	0,38493,76424,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	105846533	105855240	chr2:105846533-105855240	0	-	105846533	105846533	8553170	5	234,112,108,178,23,	0,658,1967,7323,8684,
#Partially deleted in new
chr2	105851747	105881432	chr2:105851747-105881432	0	+	105855063	105881432	789624	3	150,239,105,	0,3303,29580,
#Partially deleted in new
chr2	105851781	105894272	chr2:105851781-105894272	1	+	105855063	105893176	0	4	116,242,722,1291,	0,3266,29546,41200,
#Partially deleted in new
chr2	105854502	105857177	chr2:105854502-105857177	3	-	105854502	105854502	8553170	3	771,77,45,	0,2167,2630,
#Partially deleted in new
chr2	105854980	105857177	chr2:105854980-105857177	0	-	105854980	105854980	8553170	2	293,508,	0,1689,
#Deleted in new
chr2	105854980	105855755	chr2:105854980-105855755	0	-	105854980	105854980	8553170	2	382,166,	0,609,
#Partially deleted in new
chr2	105854980	105857177	chr2:105854980-105857177	0	-	105854980	105854980	8553170	3	293,77,216,	0,1689,1981,
#Partially deleted in new
chr2	105855042	105857177	chr2:105855042-105857177	1	-	105855042	105855042	8553170	2	320,508,	0,1627,
#Partially deleted in new
chr2	105959083	105962006	chr2:105959083-105962006	3	-	105959083	105959083	8553170	2	224,200,	0,2723,
#Deleted in new
chr2	105959186	105960309	chr2:105959186-105960309	0	-	105959186	105959186	8553170	2	121,67,	0,1056,
#Partially deleted in new
chr2	106065655	106078159	chr2:106065655-106078159	3	+	106065764	106077926	789624	4	188,48,158,395,	0,6188,8230,12109,
#Partially deleted in new
chr2	106065799	106077900	chr2:106065799-106077900	0	+	106070920	106077900	789624	5	44,216,48,158,136,	0,4990,6044,8086,11965,
#Partially deleted in new
chr2	106073817	106078155	chr2:106073817-106078155	0	+	106073817	106073817	8553170	2	226,391,	0,3947,
#Partially deleted in new
chr2	106093302	106194339	chr2:106093302-106194339	1	-	106094025	106194241	0	15	855,104,58,61,44,120,122,60,105,181,61,44,64,28,192,	0,3415,5413,7755,11491,19343,29667,32317,36371,51887,64755,70364,71433,72753,100845,
#Deleted in new
chr2	106093307	106102952	chr2:106093307-106102952	0	-	106093307	106093307	8553170	4	850,104,58,1895,	0,3410,5408,7750,
#Partially deleted in new
chr2	106093507	106194299	chr2:106093507-106194299	3	-	106094025	106194241	0	15	650,104,58,61,44,120,122,60,105,181,61,44,49,28,152,	0,3210,5208,7550,11286,19138,29462,32112,36166,51682,64550,70159,71228,72548,100640,
#Partially deleted in new
chr2	106093603	106138881	chr2:106093603-106138881	1	-	106094025	106129731	0	10	554,104,58,61,44,120,122,60,105,707,	0,3114,5112,7454,11190,19042,29366,32016,36070,44571,
#Deleted in new
chr2	106093603	106097710	chr2:106093603-106097710	0	-	106093603	106093603	8553170	2	554,993,	0,3114,
#Deleted in new
chr2	106100772	106104824	chr2:106100772-106104824	0	-	106100772	106100772	8553170	2	346,31,	0,4021,
#Partially deleted in new
chr2	106101046	106194299	chr2:106101046-106194299	0	-	106101046	106194241	789624	6	72,44,120,122,60,152,	0,3747,11599,21923,24573,93101,
#Partially deleted in new
chr2	106104793	106160625	chr2:106104793-106160625	0	-	106104793	106129731	789624	7	44,120,122,60,105,61,189,	0,7852,18176,20826,24880,53264,55643,
#Partially deleted in new
chr2	106112642	106160584	chr2:106112642-106160584	0	-	106112642	106129731	789624	7	123,122,60,105,181,61,148,	0,10327,12977,17031,32547,45415,47794,
#Partially deleted in new
chr2	106122970	106194299	chr2:106122970-106194299	0	-	106122970	106163710	789624	8	121,60,105,181,61,44,49,61,	0,2649,6703,22219,35087,40696,41765,71268,
#Partially deleted in new
chr2	106123051	106138786	chr2:106123051-106138786	0	-	106123051	106129731	789624	4	40,60,105,297,	0,2568,6622,15438,
#Partially deleted in new
chr2	106145189	106160397	chr2:106145189-106160397	0	-	106145189	106145189	8553170	3	181,61,395,	0,12868,14813,
#Partially deleted in new
chr2	106145189	106160112	chr2:106145189-106160112	0	-	106145189	106145189	8553170	4	181,61,238,110,	0,12868,13955,14813,
#Partially deleted in new
chr2	106145268	106194299	chr2:106145268-106194299	0	-	106145268	106145268	8553170	6	207,61,44,49,28,152,	0,12789,18398,19467,20787,48879,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	106158057	106166479	chr2:106158057-106166479	0	-	106158057	106158057	8553170	5	61,44,49,28,279,	0,5609,6678,7998,8143,
#Partially deleted in new
chr2	106179541	106183797	chr2:106179541-106183797	3	+	106179541	106179541	8553170	2	51,382,	0,3874,
#Deleted in new
chr2	106207393	106208115	chr2:106207393-106208115	7	+	106207393	106207393	16724991	1	722,	0,
#Partially deleted in new
chr2	106247368	106247741	chr2:106247368-106247741	7	+	106247368	106247368	16724991	1	373,	0,
#Deleted in new
chr2	106253230	106253717	chr2:106253230-106253717	7	-	106253230	106253230	16724991	1	487,	0,
#Deleted in new
chr2	106288802	106289053	chr2:106288802-106289053	7	-	106288802	106288802	16724991	1	251,	0,
#Deleted in new
chr2	106304754	106305197	chr2:106304754-106305197	7	+	106304754	106304754	16724991	1	443,	0,
#Deleted in new
chr2	106344565	106345433	chr2:106344565-106345433	7	+	106344565	106344565	16724991	1	868,	0,
#Partially deleted in new
chr2	106368208	106368876	chr2:106368208-106368876	7	-	106368208	106368208	16724991	2	235,126,	0,542,
#Partially deleted in new
chr2	106369723	106378247	chr2:106369723-106378247	7	+	106369723	106369723	16724991	6	146,221,210,95,91,68,	0,1215,2510,6727,8241,8456,
#Partially deleted in new
chr2	106382170	106392864	chr2:106382170-106392864	7	+	106382170	106382170	16724991	5	51,136,107,115,40,	0,4109,5388,8735,10654,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	106386312	106391395	chr2:106386312-106391395	4	+	106386312	106386312	16724991	3	103,107,490,	0,1246,4593,
#Partially deleted in new
chr2	106386369	106393031	chr2:106386369-106393031	5	+	106386369	106386369	16724991	4	46,107,115,207,	0,1189,4536,6455,
#Partially deleted in new
chr2	106391289	106468326	chr2:106391289-106468326	1	-	106391478	106468288	789624	23	224,202,140,2224,95,118,84,180,147,138,162,124,176,182,210,88,196,146,231,153,112,68,110,	0,21794,24560,31753,34704,38356,41645,41816,42938,43347,43751,44833,45124,45383,47678,50003,56128,60915,61406,65681,66277,67975,76927,
#Partially deleted in new
chr2	106404989	106468376	chr2:106404989-106468376	3	-	106405218	106468288	789624	23	240,202,140,2224,95,136,84,180,147,138,162,124,176,182,210,88,196,146,231,153,112,68,160,	0,8094,10860,18053,21004,24656,27945,28116,29238,29647,30051,31133,31424,31683,33978,36303,42428,47215,47706,51981,52577,54275,63227,
#Partially deleted in new
chr2	106470798	106477669	chr2:106470798-106477669	7	-	106470798	106470798	16724991	3	138,179,213,	0,4840,6658,
#Partially deleted in new
chr2	106487363	106544297	chr2:106487363-106544297	3	+	106487426	106544037	789624	6	106,360,90,90,37,306,	0,3510,8809,15110,16925,56628,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	106487376	106511078	chr2:106487376-106511078	1	+	106487426	106506940	789624	6	93,360,90,90,37,4151,	0,3497,8796,15097,16912,19551,
#Partially deleted in new
chr2	106521562	106544297	chr2:106521562-106544297	3	+	106521562	106521562	8553170	2	624,306,	0,22429,
#Partially deleted in new
chr2	106521902	106538079	chr2:106521902-106538079	3	-	106521902	106521902	8553170	3	238,213,103,	0,13256,16074,
#Partially deleted in new
chr2	106543013	106544297	chr2:106543013-106544297	0	+	106543013	106543013	8553170	2	205,306,	0,978,
#Deleted in new
chr2	106697330	106698676	chr2:106697330-106698676	7	-	106697330	106697330	16724991	1	1346,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	106801599	106887107	chr2:106801599-106887107	3	-	106806677	106843977	789624	6	5350,175,102,98,1000,132,	0,28466,30965,32449,41435,85376,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	106801603	106886646	chr2:106801603-106886646	1	-	106806677	106843977	789624	6	5346,175,102,98,1000,554,	0,28462,30961,32445,41431,84489,
#Partially deleted in new
chr2	106801607	106830079	chr2:106801607-106830079	0	-	106806677	106830079	789624	3	256,304,14,	0,5038,28458,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	106813075	106887108	chr2:106813075-106887108	1	-	106813141	106843977	789624	6	149,175,102,98,1000,133,	0,16990,19489,20973,29959,73900,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	106822922	106825031	chr2:106822922-106825031	3	-	106822922	106822922	8553170	2	222,166,	0,1943,
#Partially deleted in new
chr2	106834463	106841207	chr2:106834463-106841207	3	+	106834463	106834463	8553170	2	515,37,	0,6707,
#Partially deleted in new
chr2	106843873	106886013	chr2:106843873-106886013	0	-	106843873	106843977	789624	2	161,147,	0,41993,
#Deleted in new
chr2	106940879	106941482	chr2:106940879-106941482	7	-	106940879	106940879	16724991	1	603,	0,
#Deleted in new
chr2	106963192	106963674	chr2:106963192-106963674	7	+	106963192	106963192	16724991	1	482,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	107254690	107365873	chr2:107254690-107365873	3	-	107254690	107254690	8553170	4	191,175,100,394,	0,10037,11918,110789,
#Partially deleted in new
chr2	107266152	107365543	chr2:107266152-107365543	1	-	107266152	107266152	8553170	6	80,91,85,40,131,64,	0,465,1311,15886,16538,99327,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	107362281	107406260	chr2:107362281-107406260	1	+	107362281	107362281	8553170	3	97,277,274,	0,858,43705,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	107362318	107407329	chr2:107362318-107407329	3	+	107362318	107362318	8553170	4	60,237,134,185,	0,18720,43668,44826,
#Partially deleted in new
chr2	107381191	107400686	chr2:107381191-107400686	0	+	107381191	107381191	8553170	2	84,235,	0,19260,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	107542748	107555639	chr2:107542748-107555639	0	+	107542748	107542748	8553170	2	73,507,	0,12384,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	107754111	107822129	chr2:107754111-107822129	3	+	107754111	107754111	789624	5	159,119,61,123,78,	0,1370,56568,65750,67940,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	107754144	107812348	chr2:107754144-107812348	1	+	107754144	107754144	789624	4	126,119,61,271,	0,1337,56535,57933,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	107823062	107826891	chr2:107823062-107826891	3	-	107823062	107823062	789624	3	1123,458,211,	0,2606,3618,
#Deleted in new
chr2	107824040	107825801	chr2:107824040-107825801	0	-	107824040	107824040	8553170	3	145,183,133,	0,520,1628,
#Deleted in new
chr2	107824112	107826455	chr2:107824112-107826455	0	-	107824112	107824112	8553170	2	73,787,	0,1556,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	107825740	107826870	chr2:107825740-107826870	0	-	107825740	107825740	8553170	2	386,230,	0,900,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	107825740	107826836	chr2:107825740-107826836	0	-	107825740	107825740	8553170	2	386,284,	0,812,
#Deleted in new
chr2	107825884	107826523	chr2:107825884-107826523	0	-	107825884	107825884	8553170	2	242,151,	0,488,
#Partially deleted in new
chr2	107826936	107890841	chr2:107826936-107890841	3	+	107827013	107890731	789624	23	149,68,112,153,231,146,196,88,210,182,176,124,162,138,147,180,84,136,95,2224,140,202,121,	0,9665,11320,11875,16072,16648,21404,27619,29823,32177,32442,32785,33829,34257,34657,35745,36012,39253,42946,43768,53031,55735,63784,
#Deleted in new
chr2	107902996	107903134	chr2:107902996-107903134	7	-	107902996	107902996	16724991	1	138,	0,
#Deleted in new
chr2	107903963	107904241	chr2:107903963-107904241	7	+	107903963	107903963	16724991	2	91,66,	0,212,
#Partially deleted in new
chr2	107914947	107915286	chr2:107914947-107915286	7	+	107914947	107914947	16724991	1	339,	0,
#Deleted in new
chr2	107920762	107921248	chr2:107920762-107921248	7	-	107920762	107920762	16724991	1	486,	0,
#Partially deleted in new
chr2	107986522	108010861	chr2:107986522-108010861	1	+	107988155	108010861	789624	9	241,226,114,156,149,144,154,218,630,	0,1585,5583,6449,11315,15374,19526,21942,23709,
#Partially deleted in new
chr2	107986538	108013994	chr2:107986538-108013994	3	+	107988155	108010861	789624	9	225,229,114,156,149,144,154,218,3763,	0,1566,5567,6433,11299,15358,19510,21926,23693,
#Deleted in new
chr2	108049199	108052755	chr2:108049199-108052755	3	-	108049199	108049199	789624	3	42,224,122,	0,362,3434,
#Deleted in new
chr2	108099109	108099492	chr2:108099109-108099492	7	+	108099109	108099109	16724991	1	383,	0,
#Partially deleted in new
chr2	108167747	108217841	chr2:108167747-108217841	3	-	108167747	108167747	789624	5	22,89,128,225,147,	0,1750,11406,16710,49947,
#Partially deleted in new
chr2	108226014	108226331	chr2:108226014-108226331	7	-	108226014	108226014	16724991	1	317,	0,
#Partially deleted in new
chr2	108247194	108265351	chr2:108247194-108265351	3	+	108247194	108265351	0	7	172,129,98,127,95,181,113,	0,5170,6150,8377,11539,17630,18044,
#Partially deleted in new
chr2	108276811	108277942	chr2:108276811-108277942	7	+	108276811	108276811	16724991	1	1131,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	108288638	108309915	chr2:108288638-108309915	3	+	108293667	108308464	0	8	432,172,126,98,127,95,181,1564,	0,5008,5590,12199,15935,16533,16776,19713,
#Partially deleted in new
chr2	108288905	108304650	chr2:108288905-108304650	0	+	108293667	108304650	789624	5	165,172,126,36,77,	0,4741,5323,11994,15668,
#Partially deleted in new
chr2	108288914	108308713	chr2:108288914-108308713	1	+	108293667	108308464	789624	7	156,172,126,114,95,181,362,	0,4732,5314,15672,16257,16500,19437,
#Partially deleted in new
chr2	108288914	108308713	chr2:108288914-108308713	1	+	108293667	108308464	789624	8	156,172,126,140,127,95,181,362,	0,4732,5314,11881,15659,16257,16500,19437,
#Partially deleted in new
chr2	108293675	108308551	chr2:108293675-108308551	0	+	108293675	108304653	789624	6	143,126,127,95,181,200,	0,553,10898,11496,11739,14676,
#Partially deleted in new
chr2	108293678	108308693	chr2:108293678-108308693	0	+	108293678	108308444	789624	6	140,126,98,127,95,342,	0,550,7159,10895,11493,14673,
#Deleted in new
chr2	108293686	108294263	chr2:108293686-108294263	0	+	108293686	108293686	8553170	2	132,41,	0,536,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	108298972	108308713	chr2:108298972-108308713	0	+	108298972	108298972	8553170	4	5728,95,181,362,	0,6199,6442,9379,
#Partially deleted in new
chr2	108317724	108318611	chr2:108317724-108318611	7	+	108317724	108317724	16724991	2	182,112,	0,775,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	108322237	108353799	chr2:108322237-108353799	7	+	108322237	108322237	16724991	4	224,123,98,1430,	0,5375,7181,30132,
#Partially deleted in new
chr2	108322352	108332357	chr2:108322352-108332357	5	+	108322352	108322352	16724991	4	109,123,98,129,	0,5260,7066,9876,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	108367115	108367938	chr2:108367115-108367938	7	+	108367115	108367115	16724991	1	823,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	108377910	108382922	chr2:108377910-108382922	0	+	108377910	108377910	8553170	2	596,1161,	0,3851,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	108378011	108388057	chr2:108378011-108388057	3	+	108378337	108387432	0	7	495,126,98,127,95,181,738,	0,3750,4373,5081,5404,8180,9308,
#Partially deleted in new
chr2	108378184	108387640	chr2:108378184-108387640	1	+	108378337	108387432	0	5	322,126,95,181,321,	0,3577,5231,8007,9135,
#Deleted in new
chr2	108423611	108423885	chr2:108423611-108423885	7	+	108423611	108423611	16724991	1	274,	0,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr2	108448560	108509398	chr2:108448560-108509398	3	+	108449274	108507630	0	23	720,57,85,68,105,2466,73,101,99,120,165,105,163,101,78,138,122,177,218,195,140,202,1839,	0,1072,2467,3838,20419,21090,24266,26974,27191,33136,33726,34501,35588,37075,37270,37950,39138,41277,44012,46730,48409,50992,58999,
#Deleted in new
chr2	108449190	108450019	chr2:108449190-108450019	0	+	108449190	108449190	8553170	2	90,387,	0,442,
#Partially deleted in new
chr2	108449230	108470062	chr2:108449230-108470062	0	+	108449274	108470062	789624	6	59,57,85,68,105,412,	0,402,1797,3168,19749,20420,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr2	108449239	108509397	chr2:108449239-108509397	0	+	108449274	108468986	0	22	41,57,68,105,2466,73,101,99,120,165,105,163,101,78,138,122,177,218,195,140,202,1838,	0,393,3159,19740,20411,23587,26295,26512,32457,33047,33822,34909,36396,36591,37271,38459,40598,43333,46051,47730,50313,58320,
#Partially deleted in new
chr2	108449883	108472899	chr2:108449883-108472899	0	+	108451075	108472899	789624	6	111,85,68,105,2466,73,	0,1144,2515,19096,19767,22943,
#Deleted in new
chr2	108469299	108470227	chr2:108469299-108470227	0	+	108469299	108469299	8553170	2	33,577,	0,351,
#Partially deleted in new
chr2	108471813	108475394	chr2:108471813-108475394	0	+	108471813	108474853	789624	3	303,73,606,	0,1013,2975,
#Deleted in new
chr2	108471844	108473328	chr2:108471844-108473328	0	+	108471844	108472937	789624	2	272,502,	0,982,
#Partially deleted in new
chr2	108475561	108483156	chr2:108475561-108483156	0	+	108475561	108481799	789624	5	74,99,107,165,95,	0,190,6148,6725,7500,
#Partially deleted in new
chr2	108481696	108490135	chr2:108481696-108490135	0	+	108481696	108486446	789624	9	120,165,105,163,101,78,214,122,298,	0,590,1365,2452,3939,4134,4738,6002,8141,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	108483123	108484739	chr2:108483123-108484739	0	+	108483123	108483123	8553170	2	43,591,	0,1025,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	108493300	108509415	chr2:108493300-108509415	0	+	108493300	108493300	8553170	3	3809,202,1856,	0,6252,14259,
#Partially deleted in new
chr2	108507514	108534196	chr2:108507514-108534196	3	-	108507514	108507514	789624	3	107,83,368,	0,4415,26314,
#Partially deleted in new
chr2	108511688	108534182	chr2:108511688-108534182	1	-	108511688	108511688	8553170	2	324,250,	0,22244,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	108534354	108687238	chr2:108534354-108687238	1	+	108534562	108683999	0	10	240,160,67,121,150,151,93,49,76,3354,	0,125250,136426,137970,138525,141523,142251,143624,146340,149530,
#Partially deleted in new
chr2	108534455	108673029	chr2:108534455-108673029	0	+	108534562	108673029	789624	5	139,160,67,121,150,	0,125149,136325,137869,138424,
#Partially deleted in new
chr2	108588310	108684137	chr2:108588310-108684137	1	+	108659608	108683999	0	10	115,160,67,121,150,151,93,49,76,253,	0,71294,82470,84014,84569,87567,88295,89668,92384,95574,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	108588465	108687246	chr2:108588465-108687246	1	+	108659608	108683999	0	10	163,160,67,121,150,151,93,49,76,3362,	0,71139,82315,83859,84414,87412,88140,89513,92229,95419,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	108607160	108684448	chr2:108607160-108684448	1	+	108607247	108683999	0	10	95,160,67,121,150,151,93,49,76,564,	0,52444,63620,65164,65719,68717,69445,70818,73534,76724,
#Partially deleted in new
chr2	108621265	108684448	chr2:108621265-108684448	1	+	108621354	108683999	0	10	196,160,67,121,150,151,93,49,76,564,	0,38339,49515,51059,51614,54612,55340,56713,59429,62619,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	108621272	108673953	chr2:108621272-108673953	0	+	108621354	108672360	789624	4	189,160,121,1074,	0,38332,51052,51607,
#Partially deleted in new
chr2	108654811	108684448	chr2:108654811-108684448	3	+	108655074	108683999	0	10	445,160,67,121,150,151,93,49,76,564,	0,4793,15969,17513,18068,21066,21794,23167,25883,29073,
#Partially deleted in new
chr2	108654918	108659945	chr2:108654918-108659945	0	+	108654918	108654918	8553170	2	338,341,	0,4686,
#Partially deleted in new
chr2	108655011	108660313	chr2:108655011-108660313	0	+	108655011	108655011	8553170	3	245,160,161,	0,4593,5141,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	108655015	108671005	chr2:108655015-108671005	0	+	108655015	108655015	8553170	3	241,160,225,	0,4589,15765,
#Partially deleted in new
chr2	108655052	108662303	chr2:108655052-108662303	1	+	108655074	108662240	789624	3	204,160,75,	0,4552,7176,
#Partially deleted in new
chr2	108657893	108662800	chr2:108657893-108662800	0	+	108659608	108662240	789624	3	47,160,572,	0,1711,4335,
#Partially deleted in new
chr2	108675877	108684098	chr2:108675877-108684098	0	+	108675877	108683999	789624	6	151,93,49,76,144,214,	0,728,2101,4817,5091,8007,
#Deleted in new
chr2	108676794	108678601	chr2:108676794-108678601	3	-	108676794	108676794	789624	3	136,178,163,	0,519,1644,
#Partially deleted in new
chr2	108694749	108694893	chr2:108694749-108694893	7	-	108694749	108694749	16724991	1	144,	0,
#Partially deleted in new
chr2	108712261	108712900	chr2:108712261-108712900	7	-	108712261	108712261	16724991	1	639,	0,
#Partially deleted in new
chr2	108719480	108785811	chr2:108719480-108785811	3	+	108719606	108783901	0	29	198,68,112,153,231,146,193,88,210,182,176,124,162,138,147,180,84,136,95,5152,171,93,179,205,102,161,274,335,2216,	0,9651,11293,11841,16051,16623,21008,27230,29439,31783,32047,32390,33517,33945,34344,35424,35695,38932,42620,43756,52220,53008,53387,56251,57649,61788,62647,63047,64115,
#Partially deleted in new
chr2	108719552	108735551	chr2:108719552-108735551	0	+	108719606	108731337	789624	4	126,68,153,20,	0,9579,11769,15979,
#Partially deleted in new
chr2	108719606	108731337	chr2:108719606-108731337	1	+	108719606	108731337	789624	3	72,68,16,	0,9525,11715,
#Deleted in new
chr2	108730816	108731898	chr2:108730816-108731898	0	+	108730816	108730816	8553170	2	69,577,	0,505,
#Partially deleted in new
chr2	108751550	108753097	chr2:108751550-108753097	0	+	108751550	108751550	8553170	2	444,100,	0,1447,
#Partially deleted in new
chr2	108786756	108876578	chr2:108786756-108876578	1	+	108786822	108876128	789624	14	159,58,115,128,182,159,120,78,108,165,117,193,177,491,	0,1275,2095,4918,7783,11671,18132,25874,26063,29184,52428,59981,70037,89331,
#Partially deleted in new
chr2	108786760	108876576	chr2:108786760-108876576	0	+	108786822	108791603	789624	14	155,58,115,248,182,159,120,78,108,165,117,193,177,489,	0,1271,2091,4794,7779,11667,18128,25870,26059,29180,52424,59977,70033,89327,
#Partially deleted in new
chr2	108786762	108876578	chr2:108786762-108876578	3	+	108786822	108876253	789624	15	153,58,115,128,182,159,120,78,108,165,117,193,177,139,491,	0,1269,2089,4912,7777,11665,18126,25868,26057,29178,52422,59975,70031,86688,89325,
#Partially deleted in new
chr2	108786772	108794670	chr2:108786772-108794670	0	+	108786772	108786772	8553170	5	32,58,115,91,131,	0,1259,2079,4939,7767,
#Partially deleted in new
chr2	108786787	108794712	chr2:108786787-108794712	0	+	108786822	108788896	789624	4	128,115,123,173,	0,2064,4892,7752,
#Partially deleted in new
chr2	108791715	108846780	chr2:108791715-108846780	0	+	108791715	108846780	789624	9	87,182,159,117,78,108,165,117,43,	0,2824,6712,13176,20915,21104,24225,47469,55022,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	108856927	108885477	chr2:108856927-108885477	0	+	108856927	108882747	789624	3	43,121,376,	0,25743,28174,
#Deleted in new
chr2	108878307	108878460	chr2:108878307-108878460	7	+	108878307	108878307	16724991	1	153,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	108882190	108885475	chr2:108882190-108885475	0	+	108882190	108882190	8553170	1	3285,	0,
#Partially deleted in new
chr2	108894470	108989372	chr2:108894470-108989372	3	-	108896906	108931014	789624	12	2759,61,160,73,75,126,87,86,182,123,69,413,	0,11837,13389,15989,16305,16476,18207,28897,34727,35649,36493,94489,
#Partially deleted in new
chr2	108894470	108989269	chr2:108894470-108989269	1	-	108896906	108931014	789624	12	2759,61,160,73,297,87,86,182,123,69,116,310,	0,11837,13389,15989,16305,18207,28897,34727,35649,36493,45740,94489,
#Partially deleted in new
chr2	108894477	108989372	chr2:108894477-108989372	1	-	108896906	108931014	789624	11	2752,61,160,73,297,87,86,182,123,69,413,	0,11830,13382,15982,16298,18200,28890,34720,35642,36486,94482,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	109124356	109124609	chr2:109124356-109124609	3	-	109124356	109124356	8553170	1	253,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	109127326	109128930	chr2:109127326-109128930	3	-	109127326	109127326	8553170	1	1604,	0,
#Partially deleted in new
chr2	109129347	109504632	chr2:109129347-109504632	3	+	109129540	109501671	789624	10	766,276,96,354,104,171,254,320,332,3130,	0,218326,242238,269242,290191,303153,307545,319822,361257,372155,
#Deleted in new
chr2	109141489	109141588	chr2:109141489-109141588	3	-	109141489	109141489	5263520	1	99,	0,
#Deleted in new
chr2	109251421	109251646	chr2:109251421-109251646	7	+	109251421	109251421	16724991	1	225,	0,
#Deleted in new
chr2	109313570	109313625	chr2:109313570-109313625	3	-	109313570	109313570	5263520	1	55,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	109542981	109614143	chr2:109542981-109614143	1	-	109544121	109613827	789624	12	1343,83,188,133,169,97,162,187,196,118,69,346,	0,2478,3068,10105,21384,22781,24833,31599,42144,42739,50069,70816,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	109542981	109614206	chr2:109542981-109614206	1	-	109544308	109613827	789624	11	1343,188,133,169,97,162,187,196,118,69,409,	0,3068,10105,21384,22781,24833,31599,42144,42739,50069,70816,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	109542985	109613927	chr2:109542985-109613927	3	-	109544308	109613827	789624	10	1339,188,133,169,97,162,187,196,118,130,	0,3064,10101,21380,22777,24829,31595,42140,42735,70812,
#Partially deleted in new
chr2	109544236	109613915	chr2:109544236-109613915	1	-	109545424	109593104	789624	13	88,158,188,133,169,97,162,187,196,118,69,99,118,	0,1148,1813,8850,20129,21526,23578,30344,40889,41484,48814,60598,69561,
#Partially deleted in new
chr2	109545801	109613835	chr2:109545801-109613835	1	-	109546045	109613827	789624	10	436,133,169,97,162,187,196,118,69,38,	0,7285,18564,19961,22013,28779,39324,39919,47249,67996,
#Partially deleted in new
chr2	109546029	109567871	chr2:109546029-109567871	0	-	109546029	109546029	8553170	4	208,169,97,57,	0,18336,19733,21785,
#Deleted in new
chr2	109552535	109552846	chr2:109552535-109552846	7	+	109552535	109552535	16724991	1	311,	0,
#Partially deleted in new
chr2	109564214	109567853	chr2:109564214-109567853	0	-	109564214	109564214	8553170	3	320,97,39,	0,1548,3600,
#Partially deleted in new
chr2	109564365	109614093	chr2:109564365-109614093	0	-	109574749	109613827	789624	6	169,97,162,187,69,296,	0,1397,3449,10215,28685,49432,
#Partially deleted in new
chr2	109564424	109613921	chr2:109564424-109613921	0	-	109567932	109613827	789624	5	110,97,162,73,124,	0,1338,3390,28622,49373,
#Partially deleted in new
chr2	109564518	109613918	chr2:109564518-109613918	0	-	109564518	109574601	789624	5	16,97,162,187,121,	0,1244,3296,10062,49279,
#Partially deleted in new
chr2	109565829	109614093	chr2:109565829-109614093	0	-	109565829	109613827	789624	4	30,162,69,296,	0,1985,27221,47968,
#Partially deleted in new
chr2	109567918	109613937	chr2:109567918-109613937	0	-	109567918	109574601	789624	4	58,187,196,140,	0,6662,17207,45879,
#Partially deleted in new
chr2	109585719	109613504	chr2:109585719-109613504	0	-	109585719	109593104	789624	3	119,69,84,	0,7331,27701,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	109585725	109613510	chr2:109585725-109613510	0	-	109585725	109613114	789624	3	113,69,399,	0,7325,27386,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	109594692	109605698	chr2:109594692-109605698	3	-	109594692	109594692	8553170	2	304,306,	0,10700,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	109614333	109618990	chr2:109614333-109618990	3	+	109614489	109616067	789624	1	4657,	0,
#Partially deleted in new
chr2	109665208	109665742	chr2:109665208-109665742	7	+	109665208	109665208	16724991	2	126,94,	0,440,
#Deleted in new
chr2	109667127	109668002	chr2:109667127-109668002	7	+	109667127	109667127	16724991	2	170,223,	0,652,
#Deleted in new
chr2	109732730	109733136	chr2:109732730-109733136	7	+	109732730	109732730	16724991	1	406,	0,
#Partially deleted in new
chr2	109737138	109737523	chr2:109737138-109737523	7	-	109737138	109737138	16724991	1	385,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	109758798	109760364	chr2:109758798-109760364	3	-	109758798	109758798	789624	2	758,65,	0,1501,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr2	109792757	109833019	chr2:109792757-109833019	1	+	109794465	109832963	789624	20	232,373,68,112,153,231,146,196,88,210,182,176,124,159,138,147,180,84,136,169,	0,1407,9025,10674,11221,15416,15992,20702,26938,29147,31464,31729,32072,33118,33543,33943,35034,35307,38559,40093,
#Partially deleted in new
chr2	109794273	109832963	chr2:109794273-109832963	1	+	109794465	109832963	789624	19	264,68,112,153,231,146,196,88,210,182,176,124,159,138,147,180,84,136,113,	0,7509,9158,9705,13900,14476,19186,25422,27631,29948,30213,30556,31602,32027,32427,33518,33791,37043,38577,
#Partially deleted in new
chr2	109794304	109804131	chr2:109794304-109804131	0	+	109794465	109804131	789624	4	233,65,112,153,	0,7481,9127,9674,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr2	109794307	109857693	chr2:109794307-109857693	3	+	109794465	109855896	789624	23	230,68,112,153,231,146,196,88,210,182,176,124,159,138,147,180,84,136,95,2224,140,202,1832,	0,7475,9124,9671,13866,14442,19152,25388,27597,29914,30179,30522,31568,31993,32393,33484,33757,37009,40689,41511,50795,53502,61554,
#Partially deleted in new
chr2	109794399	109808311	chr2:109794399-109808311	0	+	109794484	109808311	789624	4	138,112,153,138,	0,9032,9579,13774,
#Partially deleted in new
chr2	109794684	109803539	chr2:109794684-109803539	0	+	109801788	109803539	789624	3	392,68,108,	0,7098,8747,
#Deleted in new
chr2	109803311	109804151	chr2:109803311-109804151	0	+	109803311	109803311	8553170	2	232,173,	0,667,
#Deleted in new
chr2	109803474	109804555	chr2:109803474-109804555	0	+	109803474	109803474	8553170	2	69,577,	0,504,
#Partially deleted in new
chr2	109804071	109835916	chr2:109804071-109835916	0	+	109804071	109813465	789624	16	60,231,196,88,65,182,176,144,159,138,147,180,84,136,95,98,	0,4102,9388,15624,17978,20150,20415,20738,21804,22229,22629,23720,23993,27245,30925,31747,
#Partially deleted in new
chr2	109808236	109813771	chr2:109808236-109813771	0	+	109808236	109808236	8553170	2	168,312,	0,5223,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	109819177	109824365	chr2:109819177-109824365	0	+	109819177	109819177	8553170	3	606,210,144,	0,2727,5044,
#Partially deleted in new
chr2	109837882	109838993	chr2:109837882-109838993	0	+	109837882	109837882	8553170	2	160,60,	0,1051,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	109840376	109857695	chr2:109840376-109857695	0	+	109840376	109840376	8553170	3	4866,202,1834,	0,7433,15485,
#Partially deleted in new
chr2	109898427	109906456	chr2:109898427-109906456	1	+	109898728	109905891	789624	3	483,160,577,	0,4825,7452,
#Partially deleted in new
chr2	109898572	109903604	chr2:109898572-109903604	0	+	109898572	109898572	8553170	2	338,352,	0,4680,
#Partially deleted in new
chr2	109898646	109924868	chr2:109898646-109924868	0	+	109898728	109919555	789624	9	264,160,67,121,150,155,93,49,521,	0,4606,15764,17305,17860,20842,21607,22993,25701,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	109898669	109914635	chr2:109898669-109914635	0	+	109898669	109898669	8553170	3	241,160,225,	0,4583,15741,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	109898690	109934429	chr2:109898690-109934429	0	+	109898728	109919555	8553170	10	220,160,67,121,150,155,93,49,76,1342,	0,4562,15720,17261,17816,20798,21563,22949,25657,34397,
#Partially deleted in new
chr2	109898728	109924769	chr2:109898728-109924769	3	+	109898728	109924769	789624	10	182,160,67,121,150,151,93,49,76,148,	0,4524,15682,17223,17778,20764,21525,22911,25619,25893,
#Partially deleted in new
chr2	109901541	109906454	chr2:109901541-109906454	1	+	109903256	109905891	789624	3	47,160,575,	0,1711,4338,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	109933160	109968552	chr2:109933160-109968552	7	+	109933160	109933160	16724991	5	45,83,482,115,483,	0,1651,14203,31527,34909,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	109936341	109968577	chr2:109936341-109968577	4	+	109936341	109936341	16724991	5	1731,482,82,115,508,	0,11022,27127,28346,31728,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	109936778	109968503	chr2:109936778-109968503	4	+	109936778	109936778	16724991	4	165,82,115,434,	0,26690,27909,31291,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	109936816	109968229	chr2:109936816-109968229	4	+	109936816	109936816	16724991	6	127,90,213,82,115,160,	0,10547,10816,26652,27871,31253,
#Partially deleted in new
chr2	109937437	109985124	chr2:109937437-109985124	3	+	109937437	109937437	8553170	4	635,90,213,1021,	0,9926,10195,46666,
#Partially deleted in new
chr2	109937834	109964740	chr2:109937834-109964740	4	+	109937834	109937834	16724991	5	238,90,213,82,53,	0,9529,9798,25634,26853,
#Partially deleted in new
chr2	109947671	109974085	chr2:109947671-109974085	5	+	109947671	109947671	16724991	8	174,91,115,129,117,113,102,120,	0,15788,17016,20398,23725,23931,24244,26294,
#Partially deleted in new
chr2	109947713	109968552	chr2:109947713-109968552	4	+	109947713	109947713	16724991	3	132,115,483,	0,16974,20356,
#Deleted in new
chr2	109963388	109965124	chr2:109963388-109965124	4	+	109963388	109963388	16724991	2	162,437,	0,1299,
#Deleted in new
chr2	109984057	109984988	chr2:109984057-109984988	7	+	109984057	109984057	16724991	1	931,	0,
#Deleted in new
chr2	109986938	109988394	chr2:109986938-109988394	7	-	109986938	109986938	16724991	1	1456,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	109987062	109995281	chr2:109987062-109995281	3	+	109987062	109987062	789624	4	128,1242,185,881,	0,498,6572,7338,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	109988271	109996140	chr2:109988271-109996140	0	+	109988271	109988271	8553170	2	531,1740,	0,6129,
#Deleted in new
chr2	110007674	110010783	chr2:110007674-110010783	7	+	110007674	110007674	16724991	2	1576,748,	0,2361,
#Deleted in new
chr2	110012264	110012601	chr2:110012264-110012601	7	-	110012264	110012264	16724991	1	337,	0,
#Partially deleted in new
chr2	110022446	110050064	chr2:110022446-110050064	7	-	110022446	110022446	16724991	25	214,204,128,225,171,117,180,150,203,140,124,202,153,140,124,141,225,137,193,102,64,33,88,118,58,	0,746,1714,2624,2956,3468,4939,5312,6108,7557,8467,11406,12635,13326,15010,17132,17735,18310,18860,19744,20689,24173,25077,25928,27560,
#Deleted in new
chr2	110069960	110070042	chr2:110069960-110070042	3	-	110069960	110069960	5263520	1	82,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	110083869	110116566	chr2:110083869-110116566	3	-	110085694	110115792	789624	4	1888,126,168,879,	0,3702,7733,31818,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	110085022	110116022	chr2:110085022-110116022	1	-	110085694	110115792	789624	2	735,335,	0,30665,
#Partially deleted in new
chr2	110085711	110115821	chr2:110085711-110115821	0	-	110091618	110115792	789624	5	46,126,168,106,134,	0,1860,5891,11787,29976,
#Deleted in new
chr2	110086432	110086523	chr2:110086432-110086523	3	-	110086432	110086432	5263520	1	91,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr2	110122310	110205042	chr2:110122310-110205042	3	-	110123790	110204968	0	20	1753,45,74,113,100,77,83,111,75,129,95,88,211,104,102,193,125,61,74,143,	0,3326,6875,9368,21231,22182,24442,25605,27871,37816,39292,40737,42209,42741,46141,47495,56112,57313,79110,82589,
#Partially deleted in new
chr2	110123335	110205066	chr2:110123335-110205066	1	-	110123790	110204968	0	20	728,45,74,113,100,77,83,111,75,129,95,85,211,104,102,193,125,61,74,167,	0,2301,5850,8343,20206,21157,23417,24580,26846,36791,38267,39712,41184,41716,45116,46470,55087,56288,78085,81564,
#Partially deleted in new
chr2	110123335	110204992	chr2:110123335-110204992	1	-	110123790	110204968	0	20	728,45,74,113,100,77,83,111,75,129,95,88,43,104,102,193,125,61,74,93,	0,2301,5850,8343,20206,21157,23417,24580,26846,36791,38267,39712,41352,41716,45116,46470,55087,56288,78085,81564,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	110123347	110205017	chr2:110123347-110205017	0	-	110123347	110123347	8553170	16	5912,113,1028,83,111,75,129,95,1683,104,102,193,125,61,74,118,	0,8331,20194,23405,24568,26834,36779,38255,39700,41704,45104,46458,55075,56276,78073,81552,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr2	110123587	110205001	chr2:110123587-110205001	0	-	110123587	110123587	8553170	19	476,45,74,113,100,77,83,111,75,129,95,1683,104,102,193,125,61,74,102,	0,2049,5598,8091,19954,20905,23165,24328,26594,36539,38015,39460,41464,44864,46218,54835,56036,77833,81312,
#Partially deleted in new
chr2	110123707	110204972	chr2:110123707-110204972	1	-	110123790	110204968	0	18	356,45,74,113,100,77,83,111,75,129,95,85,43,104,102,193,74,73,	0,1929,5478,7971,19834,20785,23045,24208,26474,36419,37895,39340,40980,41344,44744,46098,77713,81192,
#Partially deleted in new
chr2	110123707	110204995	chr2:110123707-110204995	1	-	110123790	110204968	789624	21	356,105,45,74,113,100,77,83,111,75,129,95,85,43,104,102,193,125,61,74,96,	0,1511,1929,5478,7971,19834,20785,23045,24208,26474,36419,37895,39340,40980,41344,44744,46098,54715,55916,77713,81192,
#Partially deleted in new
chr2	110125398	110129259	chr2:110125398-110129259	0	-	110125612	110129259	789624	2	283,74,	0,3787,
#Partially deleted in new
chr2	110128951	110144548	chr2:110128951-110144548	0	-	110128951	110128951	8553170	4	308,113,100,56,	0,2727,14590,15541,
#Partially deleted in new
chr2	110178040	110204999	chr2:110178040-110204999	1	-	110178385	110204968	789624	4	507,61,74,100,	0,1583,23380,26859,
#Partially deleted in new
chr2	110178753	110204961	chr2:110178753-110204961	0	-	110202404	110204961	789624	5	182,61,74,107,62,	0,870,22667,23619,26146,
#Deleted in new
chr2	110184053	110185179	chr2:110184053-110185179	7	+	110184053	110184053	16724991	1	1126,	0,
#Deleted in new
chr2	110211529	110212823	chr2:110211529-110212823	1	-	110212354	110212525	789624	3	93,336,32,	0,685,1262,
#Deleted in new
chr2	110211529	110212562	chr2:110211529-110212562	1	-	110212354	110212525	789624	2	93,348,	0,685,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	110231105	110245646	chr2:110231105-110245646	5	+	110231105	110231105	16724991	3	45,83,335,	0,1651,14206,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	110234734	110266190	chr2:110234734-110266190	4	+	110234734	110234734	16724991	6	154,90,213,82,115,160,	0,10577,10846,26697,27916,31296,
#Partially deleted in new
chr2	110245590	110285856	chr2:110245590-110285856	3	+	110245590	110245590	8553170	4	203,168,126,238,	0,34015,38088,40028,
#Partially deleted in new
chr2	110245650	110266516	chr2:110245650-110266516	4	+	110245650	110245650	16724991	3	143,115,486,	0,17000,20380,
#Partially deleted in new
chr2	110245655	110283790	chr2:110245655-110283790	0	+	110245655	110245655	8553170	4	138,115,168,112,	0,16995,33950,38023,
#Partially deleted in new
chr2	110245662	110266559	chr2:110245662-110266559	4	+	110245662	110245662	16724991	4	131,82,115,529,	0,15769,16988,20368,
#Partially deleted in new
chr2	110245696	110283768	chr2:110245696-110283768	0	+	110245696	110245696	8553170	5	97,82,115,168,90,	0,15735,16954,33909,37982,
#Partially deleted in new
chr2	110245755	110272050	chr2:110245755-110272050	7	+	110245755	110245755	16724991	8	38,82,115,129,117,115,102,122,	0,15676,16895,20275,23604,23810,24123,26173,
#Partially deleted in new
chr2	110279605	110285681	chr2:110279605-110285681	7	+	110279605	110279605	16724991	3	168,126,63,	0,4073,6013,
#Deleted in new
chr2	110284852	110284943	chr2:110284852-110284943	3	+	110284852	110284852	5263520	1	91,	0,
#Partially deleted in new
chr2	110321401	110348941	chr2:110321401-110348941	7	+	110321401	110321401	16724991	26	58,118,56,60,64,102,193,137,225,141,124,140,153,202,350,124,140,203,150,180,117,167,225,128,204,211,	0,1556,2469,3374,6834,7742,8535,9141,9628,10315,12455,14123,14801,15981,16931,18995,19889,21275,22125,22468,23958,24420,24694,25701,26593,27329,
#Deleted in new
chr2	110358789	110359126	chr2:110358789-110359126	7	+	110358789	110358789	16724991	1	337,	0,
#Deleted in new
chr2	110360607	110363737	chr2:110360607-110363737	7	-	110360607	110360607	16724991	1	3130,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	110375137	110384442	chr2:110375137-110384442	3	-	110375137	110375137	8553170	3	1931,185,128,	0,2512,9177,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	110375155	110383233	chr2:110375155-110383233	0	-	110375155	110375155	8553170	2	1913,530,	0,7548,
#Deleted in new
chr2	110383111	110384642	chr2:110383111-110384642	7	+	110383111	110383111	16724991	1	1531,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	110386376	110388163	chr2:110386376-110388163	7	-	110386376	110386376	16724991	1	1787,	0,
#Partially deleted in new
chr2	110386410	110433673	chr2:110386410-110433673	3	-	110386410	110386410	8553170	4	987,213,90,238,	0,37250,37642,47025,
#Deleted in new
chr2	110386513	110387441	chr2:110386513-110387441	5	-	110386513	110386513	16724991	1	928,	0,
#Partially deleted in new
chr2	110397405	110423834	chr2:110397405-110423834	5	-	110397405	110397405	16724991	8	120,102,113,117,129,115,91,174,	0,2068,2370,2572,5887,9282,10532,26255,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	110402913	110435166	chr2:110402913-110435166	7	-	110402913	110402913	16724991	5	508,115,82,482,1731,	0,3774,5024,20747,30522,
#Partially deleted in new
chr2	110402935	110423792	chr2:110402935-110423792	4	-	110402935	110402935	16724991	3	486,115,132,	0,3752,20725,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	110403154	110434729	chr2:110403154-110434729	4	-	110403154	110403154	16724991	4	267,115,82,165,	0,3533,4783,31410,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	110403261	110434691	chr2:110403261-110434691	4	-	110403261	110403261	16724991	6	160,115,82,213,90,127,	0,3426,4676,20399,20791,31303,
#Deleted in new
chr2	110406365	110408099	chr2:110406365-110408099	4	-	110406365	110406365	16724991	2	437,162,	0,1572,
#Partially deleted in new
chr2	110406749	110433673	chr2:110406749-110433673	4	-	110406749	110406749	16724991	5	53,82,213,90,238,	0,1188,16911,17303,26686,
#Partially deleted in new
chr2	110446639	110472860	chr2:110446639-110472860	0	-	110451951	110472778	8553170	9	521,49,93,155,150,121,67,160,264,	0,3179,4521,5224,8211,8795,10390,21455,25957,
#Partially deleted in new
chr2	110446738	110473041	chr2:110446738-110473041	3	-	110446738	110472778	789624	10	148,76,49,93,151,150,121,67,160,445,	0,346,3080,4422,5125,8112,8696,10291,21356,25858,
#Partially deleted in new
chr2	110449241	110451064	chr2:110449241-110451064	3	+	110449241	110449241	8553170	3	163,178,135,	0,1113,1688,
#Partially deleted in new
chr2	110465050	110472816	chr2:110465050-110472816	0	-	110465050	110465050	8553170	3	577,160,220,	0,3044,7546,
#Partially deleted in new
chr2	110465051	110473075	chr2:110465051-110473075	1	-	110465615	110472778	789624	3	576,160,479,	0,3043,7545,
#Partially deleted in new
chr2	110467913	110472934	chr2:110467913-110472934	0	-	110467913	110467913	8553170	2	341,338,	0,4683,
#Deleted in new
chr2	110500099	110500235	chr2:110500099-110500235	7	+	110500099	110500099	16724991	1	136,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	110513811	110531130	chr2:110513811-110531130	0	-	110513811	110513811	8553170	3	1834,202,4866,	0,9684,12453,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr2	110513820	110577101	chr2:110513820-110577101	3	-	110515610	110577024	789624	23	1825,202,140,2224,95,136,84,180,147,138,159,124,176,182,210,88,196,146,231,153,112,68,149,	0,9675,12444,19644,22595,26234,29538,29715,30839,31248,31652,32733,33024,33283,35572,37903,44031,48791,49282,53555,54143,55836,63132,
#Partially deleted in new
chr2	110532513	110534010	chr2:110532513-110534010	0	-	110532513	110534010	789624	2	60,546,	0,951,
#Partially deleted in new
chr2	110535590	110567435	chr2:110535590-110567435	0	-	110558041	110567435	789624	16	98,95,136,84,180,147,138,159,144,176,182,65,88,196,231,60,	0,825,4464,7768,7945,9069,9478,9882,10963,11254,11513,13802,16133,22261,27512,31785,
#Partially deleted in new
chr2	110538487	110577101	chr2:110538487-110577101	1	-	110538543	110577024	789624	19	169,136,84,180,147,138,159,124,176,182,210,88,196,146,231,153,112,68,149,	0,1567,4871,5048,6172,6581,6985,8066,8357,8616,10905,13236,19364,24124,24615,28888,29476,31169,38465,
#Partially deleted in new
chr2	110545531	110546997	chr2:110545531-110546997	0	-	110545531	110545531	8553170	2	100,444,	0,1022,
#Partially deleted in new
chr2	110557738	110563270	chr2:110557738-110563270	0	-	110557738	110557738	8553170	2	309,168,	0,5364,
#Partially deleted in new
chr2	110563195	110577090	chr2:110563195-110577090	0	-	110563195	110563195	8553170	4	138,153,112,138,	0,4180,4768,13757,
#Partially deleted in new
chr2	110563330	110577185	chr2:110563330-110577185	0	-	110563330	110577024	789624	5	3,153,112,65,233,	0,4045,4633,6326,13622,
#Deleted in new
chr2	110566951	110568032	chr2:110566951-110568032	0	-	110566951	110566951	8553170	2	577,69,	0,1012,
#Partially deleted in new
chr2	110567967	110576823	chr2:110567967-110576823	0	-	110567967	110569718	789624	3	108,68,392,	0,1689,8464,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	110610915	110612404	chr2:110610915-110612404	3	+	110610915	110610915	8553170	2	280,467,	0,1022,
#Deleted in new
chr2	110633946	110634333	chr2:110633946-110634333	7	+	110633946	110633946	16724991	1	387,	0,
#Partially deleted in new
chr2	110637697	110678107	chr2:110637697-110678107	1	-	110637963	110677995	0	24	462,107,172,158,162,116,144,239,88,178,82,100,111,129,59,260,152,185,53,101,44,197,139,138,	0,2044,3336,3609,3944,4421,11536,12848,15738,18041,19338,19848,20712,20916,22280,23884,28565,29823,30099,31755,32827,34963,36388,40272,
#Partially deleted in new
chr2	110637831	110678063	chr2:110637831-110678063	1	-	110637963	110677995	0	24	328,107,159,162,116,144,239,88,178,82,100,111,129,59,260,152,185,53,101,44,197,139,60,94,	0,1910,3202,3810,4287,11402,12714,15604,17907,19204,19714,20578,20782,22146,23750,28431,29689,29965,31621,32693,34829,36254,36474,40138,
#Partially deleted in new
chr2	110637833	110678114	chr2:110637833-110678114	3	-	110637963	110677995	0	25	326,107,172,158,162,116,144,239,88,178,82,100,111,129,59,260,152,185,53,101,44,197,139,60,145,	0,1908,3200,3473,3808,4285,11400,12712,15602,17905,19202,19712,20576,20780,22144,23748,28429,29687,29963,31619,32691,34827,36252,36472,40136,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	110641325	110642790	chr2:110641325-110642790	0	-	110641325	110641325	8553170	4	139,162,116,342,	0,316,793,1123,
#Partially deleted in new
chr2	110642113	110678028	chr2:110642113-110678028	0	-	110642113	110642113	8553170	20	121,144,239,88,178,82,100,111,129,59,260,152,185,53,101,44,197,139,60,59,	0,7120,8432,11322,13625,14922,15432,16296,16500,17864,19468,24149,25407,25683,27339,28411,30547,31972,32192,35856,
#Partially deleted in new
chr2	110648816	110650739	chr2:110648816-110650739	0	-	110648816	110648816	8553170	2	561,194,	0,1729,
#Partially deleted in new
chr2	110660867	110678063	chr2:110660867-110678063	0	-	110660867	110660867	8553170	10	974,152,185,53,101,44,197,139,60,94,	0,5395,6653,6929,8585,9657,11793,13218,13438,17102,
#Partially deleted in new
chr2	110661355	110667565	chr2:110661355-110667565	0	-	110661355	110661355	8553170	3	634,152,45,	0,4907,6165,
#Partially deleted in new
chr2	110665961	110669475	chr2:110665961-110669475	0	-	110665961	110665961	8553170	4	453,185,53,23,	0,1559,1835,3491,
#Partially deleted in new
chr2	110670524	110678033	chr2:110670524-110678033	0	-	110670524	110674364	789624	6	44,197,139,60,47,64,	0,2136,3561,3781,6052,7445,
#Partially deleted in new
chr2	110670561	110678041	chr2:110670561-110678041	0	-	110670561	110674364	789624	6	7,197,139,60,91,72,	0,2099,3524,3744,5971,7408,
#Deleted in new
chr2	110674115	110675297	chr2:110674115-110675297	0	-	110674115	110674364	789624	3	109,60,371,	0,190,811,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	110709574	110716595	chr2:110709574-110716595	3	-	110709574	110709574	8553170	2	3855,540,	0,6481,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr2	110732572	111094344	chr2:110732572-111094344	3	+	110768389	111093498	789624	19	202,97,84,87,99,115,87,73,133,35,117,154,90,110,112,88,71,102,858,	0,35795,52159,61077,61503,66037,66441,69079,72690,108798,176216,200916,231051,254535,263320,299054,316645,360292,360914,
#Partially deleted in new
chr2	110732572	111118222	chr2:110732572-111118222	1	+	110768389	111117816	789624	18	202,97,84,87,99,115,87,73,133,35,117,154,110,112,88,71,102,607,	0,35795,52159,61077,61503,66037,66441,69079,72690,108798,176216,200916,254535,263320,299054,316645,360292,385043,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	110732633	110888017	chr2:110732633-110888017	1	+	110768389	110886832	789624	11	141,97,84,87,99,115,87,73,133,35,1237,	0,35734,52098,61016,61442,65976,66380,69018,72629,108737,154147,
#Partially deleted in new
chr2	110732854	110793700	chr2:110732854-110793700	0	+	110768389	110793700	789624	4	254,97,84,51,	0,35513,51877,60795,
#Deleted in new
chr2	110794068	110796181	chr2:110794068-110796181	0	+	110794068	110794068	8553170	3	106,58,282,	0,1525,1831,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	110799039	111094223	chr2:110799039-111094223	0	+	110799039	111093498	789624	12	61,73,133,35,117,154,110,112,88,71,102,737,	0,2612,6223,42331,109749,134449,188068,196853,232587,250178,293825,294447,
#Partially deleted in new
chr2	110805318	110995909	chr2:110805318-110995909	0	+	110805318	110995909	789624	6	77,35,154,90,110,17,	0,36052,128170,158305,181789,190574,
#Partially deleted in new
chr2	110963623	111101251	chr2:110963623-111101251	0	+	110963623	111049226	789624	6	90,110,112,71,102,183,	0,23484,32269,85594,129241,137445,
#Deleted in new
chr2	110967833	110968719	chr2:110967833-110968719	7	+	110967833	110967833	16724991	1	886,	0,
#Partially deleted in new
chr2	110987197	111117692	chr2:110987197-111117692	0	+	110987197	111092926	789624	5	20,112,88,102,77,	0,8695,44429,105667,130418,
#Partially deleted in new
chr2	110995956	111018073	chr2:110995956-111018073	0	+	110995956	110995956	8553170	3	48,218,187,	0,20555,21930,
#Partially deleted in new
chr2	111036775	111495046	chr2:111036775-111495046	0	-	111036775	111036775	8553170	4	147,177,89,162,	0,307285,330711,458109,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	111098344	111114185	chr2:111098344-111114185	1	-	111098344	111098344	789624	3	2799,180,47,	0,3552,15794,
#Partially deleted in new
chr2	111112933	111115588	chr2:111112933-111115588	2	-	111112933	111112933	8553170	3	224,160,69,	0,1205,2586,
#Deleted in new
chr2	111119377	111124112	chr2:111119377-111124112	0	+	111123745	111124112	789624	2	192,380,	0,4355,
#Partially deleted in new
chr2	111120913	111165048	chr2:111120913-111165048	3	+	111123745	111164231	0	5	275,137,90,104,916,	0,2819,3136,29130,43219,
#Partially deleted in new
chr2	111120913	111128844	chr2:111120913-111128844	1	+	111123745	111128751	0	4	275,137,90,218,	0,2819,3136,7713,
#Partially deleted in new
chr2	111120913	111146281	chr2:111120913-111146281	1	+	111123745	111144491	789624	6	275,137,90,79,33,333,	0,2819,3136,21399,23574,25035,
#Partially deleted in new
chr2	111120913	111168445	chr2:111120913-111168445	1	+	111123745	111153808	0	4	275,407,125,4313,	0,2819,32866,43219,
#Partially deleted in new
chr2	111120913	111168445	chr2:111120913-111168445	1	+	111123745	111151851	0	6	275,137,104,72,125,4313,	0,2819,29130,30908,32866,43219,
#Partially deleted in new
chr2	111120913	111168445	chr2:111120913-111168445	1	+	111123745	111144501	0	5	275,407,33,104,4313,	0,2819,23574,29130,43219,
#Partially deleted in new
chr2	111120913	111168445	chr2:111120913-111168445	1	+	111123745	111153791	0	6	275,137,90,104,125,4313,	0,2819,3136,29130,32866,43219,
#Partially deleted in new
chr2	111120913	111168445	chr2:111120913-111168445	1	+	111123745	111153791	0	5	275,407,104,125,4313,	0,2819,29130,32866,43219,
#Partially deleted in new
chr2	111120913	111168445	chr2:111120913-111168445	1	+	111123745	111161439	0	5	275,407,104,132,4313,	0,2819,29130,40505,43219,
#Partially deleted in new
chr2	111120913	111168445	chr2:111120913-111168445	1	+	111123745	111164146	0	3	275,407,4313,	0,2819,43219,
#Partially deleted in new
chr2	111120928	111168447	chr2:111120928-111168447	1	+	111123745	111164231	0	4	260,407,104,4315,	0,2804,29115,43204,
#Deleted in new
chr2	111122669	111123960	chr2:111122669-111123960	0	+	111123745	111123960	789624	2	254,228,	0,1063,
#Partially deleted in new
chr2	111122693	111164643	chr2:111122693-111164643	0	+	111123745	111153791	0	6	230,137,90,104,125,511,	0,1039,1356,27350,31086,41439,
#Partially deleted in new
chr2	111123745	111128837	chr2:111123745-111128837	1	+	111123745	111128751	0	3	124,90,211,	0,304,4881,
#Partially deleted in new
chr2	111123745	111164231	chr2:111123745-111164231	0	+	111123745	111153808	0	4	124,90,125,99,	0,304,30034,40387,
#Partially deleted in new
chr2	111123745	111164352	chr2:111123745-111164352	0	+	111123745	111144501	0	5	394,33,104,132,220,	0,20742,26298,37673,40387,
#Partially deleted in new
chr2	111123745	111164231	chr2:111123745-111164231	0	+	111123745	111153808	0	3	394,125,99,	0,30034,40387,
#Partially deleted in new
chr2	111123745	111164231	chr2:111123745-111164231	0	+	111123745	111161439	0	4	394,104,132,99,	0,26298,37673,40387,
#Partially deleted in new
chr2	111123745	111164643	chr2:111123745-111164643	0	+	111123745	111151851	0	5	124,104,72,125,511,	0,26298,28076,30034,40387,
#Partially deleted in new
chr2	111123745	111164231	chr2:111123745-111164231	0	+	111123745	111161439	0	4	124,104,132,99,	0,26298,37673,40387,
#Partially deleted in new
chr2	111123745	111153808	chr2:111123745-111153808	1	+	111123745	111153808	0	3	124,90,29,	0,304,30034,
#Partially deleted in new
chr2	111123745	111161439	chr2:111123745-111161439	1	+	111123745	111161439	0	3	124,104,21,	0,26298,37673,
#Partially deleted in new
chr2	111123751	111146284	chr2:111123751-111146284	0	+	111123751	111144491	789624	5	118,90,79,33,336,	0,298,18561,20736,22197,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	111131346	111494957	chr2:111131346-111494957	3	-	111131346	111131346	8553170	5	909,697,177,89,73,	0,33557,212714,236140,363538,
#Partially deleted in new
chr2	111162770	111495067	chr2:111162770-111495067	1	-	111162770	111162770	8553170	5	676,727,177,89,183,	0,2133,181290,204716,332114,
#Partially deleted in new
chr2	111195962	111206494	chr2:111195962-111206494	3	+	111195962	111195962	8553170	2	122,290,	0,10242,
#Partially deleted in new
chr2	111196349	111344098	chr2:111196349-111344098	1	-	111196349	111196349	8553170	2	845,38,	0,147711,
#Partially deleted in new
chr2	111196919	111367525	chr2:111196919-111367525	0	-	111196919	111196919	8553170	4	275,112,177,39,	0,36708,147141,170567,
#Partially deleted in new
chr2	111203963	111206215	chr2:111203963-111206215	7	-	111203963	111203963	16724991	2	256,91,	0,2161,
#Partially deleted in new
chr2	111207775	111495048	chr2:111207775-111495048	1	-	111207775	111207775	789624	6	886,112,94,177,89,164,	0,25852,40372,136285,159711,287109,
#Partially deleted in new
chr2	111207813	111495120	chr2:111207813-111495120	1	-	111207813	111207813	8553170	6	848,195,94,177,2015,236,	0,31988,40334,136247,157747,287071,
#Deleted in new
chr2	111208014	111209117	chr2:111208014-111209117	0	-	111208014	111208014	8553170	1	1103,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	111210994	111212476	chr2:111210994-111212476	3	-	111210994	111210994	8553170	1	1482,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	111237003	111239047	chr2:111237003-111239047	0	-	111237003	111237003	8553170	1	2044,	0,
#Partially deleted in new
chr2	111238718	111495020	chr2:111238718-111495020	1	-	111238718	111238718	8553170	4	335,195,177,136,	0,1083,105342,256166,
#Partially deleted in new
chr2	111239823	111495048	chr2:111239823-111495048	1	-	111239823	111239823	8553170	6	173,129,94,177,89,164,	0,7606,8324,104237,127663,255061,
#Partially deleted in new
chr2	111248149	111365714	chr2:111248149-111365714	0	-	111248149	111248149	8553170	3	92,177,154,	0,95911,117411,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	111265282	111279880	chr2:111265282-111279880	3	+	111265282	111265282	8553170	2	181,436,	0,14162,
#Deleted in new
chr2	111266867	111267473	chr2:111266867-111267473	3	-	111266867	111266867	8553170	1	606,	0,
#Partially deleted in new
chr2	111276330	111495100	chr2:111276330-111495100	0	-	111276330	111276330	8553170	4	90,177,89,216,	0,67730,91156,218554,
#Deleted in new
chr2	111295628	111296046	chr2:111295628-111296046	7	-	111295628	111295628	16724991	1	418,	0,
#Partially deleted in new
chr2	111314311	111495033	chr2:111314311-111495033	0	-	111314311	111314311	8553170	4	251,177,89,149,	0,29749,53175,180573,
#Deleted in new
chr2	111321012	111321086	chr2:111321012-111321086	3	-	111321012	111321012	5263520	1	74,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	111321432	111324812	chr2:111321432-111324812	3	-	111321432	111321432	8553170	1	3380,	0,
#Partially deleted in new
chr2	111344090	111495054	chr2:111344090-111495054	1	-	111344090	111344090	8553170	4	147,154,89,170,	0,6517,23396,150794,
#Partially deleted in new
chr2	111383751	111384992	chr2:111383751-111384992	7	+	111383751	111383751	16724991	1	1241,	0,
#Partially deleted in new
chr2	111383805	111384263	chr2:111383805-111384263	4	+	111383805	111383805	16724991	1	458,	0,
#Partially deleted in new
chr2	111429308	111495086	chr2:111429308-111495086	0	-	111429308	111429308	789624	2	312,202,	0,65576,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	111429311	111495051	chr2:111429311-111495051	1	-	111429311	111429311	8553170	4	309,146,155,167,	0,48024,50595,65573,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	111429317	111523376	chr2:111429317-111523376	1	-	111429317	111429317	8553170	5	303,138,155,162,205,	0,17894,50589,65567,93854,
#Partially deleted in new
chr2	111429318	111494988	chr2:111429318-111494988	0	-	111429318	111429318	8553170	3	302,146,104,	0,48017,65566,
#Partially deleted in new
chr2	111429321	111441621	chr2:111429321-111441621	0	-	111429321	111429321	8553170	2	299,114,	0,12186,
#Deleted in new
chr2	111429321	111430908	chr2:111429321-111430908	0	-	111429321	111429321	8553170	1	1587,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	111429321	111495034	chr2:111429321-111495034	1	-	111429321	111429321	8553170	4	299,201,109,150,	0,40465,42667,65563,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	111429322	111480261	chr2:111429322-111480261	0	-	111429322	111429322	789624	3	298,155,93,	0,50584,50846,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	111429323	111699033	chr2:111429323-111699033	3	-	111429323	111429323	8553170	8	297,153,126,75,118,83,68,68,	0,109829,125620,127632,164270,182639,185219,269642,
#Partially deleted in new
chr2	111429442	111495025	chr2:111429442-111495025	1	-	111429442	111429442	8553170	3	178,385,141,	0,40160,65442,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	111468809	111637967	chr2:111468809-111637967	3	+	111468809	111468809	8553170	2	26,845,	0,168313,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	111469637	111480261	chr2:111469637-111480261	0	-	111469637	111469637	8553170	4	350,109,155,93,	0,2351,10269,10531,
#Partially deleted in new
chr2	111491272	111510990	chr2:111491272-111510990	3	+	111491272	111491272	8553170	2	390,367,	0,19351,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	111491555	111570974	chr2:111491555-111570974	0	+	111491555	111491555	8553170	3	107,85,47,	0,52647,79372,
#Deleted in new
chr2	111491942	111494811	chr2:111491942-111494811	3	-	111491942	111491942	8553170	2	626,255,	0,2614,
#Deleted in new
chr2	111558412	111559937	chr2:111558412-111559937	7	-	111558412	111558412	16724991	1	1525,	0,
#Partially deleted in new
chr2	111593593	111631040	chr2:111593593-111631040	0	-	111593593	111593593	8553170	5	118,175,84,68,140,	0,18277,19558,20949,37307,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	111607840	111612518	chr2:111607840-111612518	3	+	111607840	111607840	8553170	2	175,617,	0,4061,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	111611638	111784343	chr2:111611638-111784343	0	-	111766960	111784343	789624	12	407,142,68,43,131,135,199,96,87,139,68,21,	0,1513,2904,118640,155226,160702,165220,167036,168660,170730,172258,172684,
#Deleted in new
chr2	111675025	111675343	chr2:111675025-111675343	7	+	111675025	111675025	16724991	1	318,	0,
#Deleted in new
chr2	111717507	111717837	chr2:111717507-111717837	7	+	111717507	111717507	16724991	1	330,	0,
#Partially deleted in new
chr2	111742585	111744662	chr2:111742585-111744662	7	+	111742585	111742585	16724991	3	48,257,712,	0,754,1365,
#Partially deleted in new
chr2	111766270	111856847	chr2:111766270-111856847	0	-	111766960	111856847	789624	37	725,135,199,96,87,139,68,78,118,87,194,54,91,77,75,79,83,135,92,235,272,119,215,179,71,37,79,149,92,269,75,188,61,141,135,66,52,	0,6070,10588,12404,14028,16098,17626,18052,19089,21963,26091,27807,27962,28547,34526,36157,37177,37434,39531,42676,49099,52569,54968,56151,58695,58860,59506,65015,66949,68333,72167,77141,80867,81454,84505,90343,90525,
#Boundary problem: need 48, got 0, diff 48, mapped 0.0
chr2	111767636	111884690	chr2:111767636-111884690	3	-	111769290	111880825	0	48	1770,135,199,96,87,139,68,78,118,87,194,54,91,77,75,79,83,135,92,235,272,119,215,179,71,37,79,149,92,269,75,188,61,141,135,66,91,96,210,221,146,74,83,101,52,162,237,749,	0,4704,9222,11038,12662,14732,16260,16686,17723,20597,24725,26441,26596,27181,33160,34791,35811,36068,38165,41310,47733,51203,53602,54785,57329,57494,58140,63649,65583,66967,70801,75775,79501,80088,83139,88977,89159,90669,94752,96038,97169,100386,104993,105671,105976,111173,112976,116305,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	111769064	111780753	chr2:111769064-111780753	0	-	111769064	111769064	8553170	4	342,135,199,2079,	0,3276,7794,9610,
#Deleted in new
chr2	111771060	111771134	chr2:111771060-111771134	3	-	111771060	111771060	5263520	1	74,	0,
#Partially deleted in new
chr2	111792370	111795040	chr2:111792370-111795040	0	-	111792370	111792370	8553170	4	185,54,91,223,	0,1707,1862,2447,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	111802532	111821756	chr2:111802532-111821756	0	-	111802532	111802532	8553170	7	998,135,92,235,272,119,518,	0,1172,3269,6414,12837,16307,18706,
#Deleted in new
chr2	111856377	111857065	chr2:111856377-111857065	0	-	111856377	111856377	8553170	2	302,270,	0,418,
#Partially deleted in new
chr2	111865797	111866405	chr2:111865797-111866405	7	+	111865797	111865797	16724991	2	117,186,	0,422,
#Partially deleted in new
chr2	111867997	111880878	chr2:111867997-111880878	0	-	111872689	111880825	789624	5	99,83,52,162,266,	0,4632,5615,10812,12615,
#Partially deleted in new
chr2	111872689	111880825	chr2:111872689-111880825	1	-	111872689	111880825	789624	4	23,52,162,213,	0,923,6120,7923,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	111872799	111884690	chr2:111872799-111884690	0	-	111872799	111872799	8553170	5	609,52,162,237,749,	0,813,6010,7813,11142,
#Partially deleted in new
chr2	111880509	111884181	chr2:111880509-111884181	0	-	111880509	111880509	8553170	2	340,240,	0,3432,
#Partially deleted in new
chr2	111887913	111888741	chr2:111887913-111888741	7	+	111887913	111887913	16724991	2	249,181,	0,647,
#Partially deleted in new
chr2	111898478	112029561	chr2:111898478-112029561	3	+	111898735	112028864	0	19	318,421,101,174,87,116,184,152,154,154,86,96,81,93,119,110,160,137,1211,	0,30641,46481,48915,66712,69658,76810,84363,95772,98844,102722,104613,105425,109904,111469,120934,122943,123779,129872,
#Partially deleted in new
chr2	111898607	112029366	chr2:111898607-112029366	1	+	111898735	112028864	0	20	189,421,101,174,87,116,184,152,154,154,86,96,81,93,119,110,160,137,943,43,	0,30512,46352,48786,66583,69529,76681,84234,95643,98715,102593,104484,105296,109775,111340,120805,122814,123650,129743,130716,
#Partially deleted in new
chr2	111898628	112029367	chr2:111898628-112029367	1	+	111945005	112028864	789624	18	168,101,174,87,116,184,152,154,154,86,96,81,93,119,110,160,137,1017,	0,46331,48765,66562,69508,76660,84213,95622,98694,102572,104463,105275,109754,111319,120784,122793,123629,129722,
#Partially deleted in new
chr2	111898663	112029000	chr2:111898663-112029000	0	+	111898735	111945004	789624	19	133,185,101,174,87,116,184,152,154,154,86,96,81,93,119,110,160,137,650,	0,30456,46296,48730,66527,69473,76625,84178,95587,98659,102537,104428,105240,109719,111284,120749,122758,123594,129687,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	111930174	111930467	chr2:111930174-111930467	3	+	111930174	111930174	8553170	1	293,	0,
#Deleted in new
chr2	111940301	111941036	chr2:111940301-111941036	7	-	111940301	111940301	16724991	1	735,	0,
#Deleted in new
chr2	111952143	111952671	chr2:111952143-111952671	7	-	111952143	111952143	16724991	1	528,	0,
#Partially deleted in new
chr2	111997369	112003443	chr2:111997369-112003443	0	+	111997369	111997369	8553170	3	107,86,352,	0,3831,5722,
#Partially deleted in new
chr2	112019412	112028663	chr2:112019412-112028663	0	+	112019412	112028663	789624	5	110,51,160,137,313,	0,1191,2009,2845,8938,
#Partially deleted in new
chr2	112055222	112119318	chr2:112055222-112119318	3	+	112055591	112116143	789624	19	534,61,92,132,51,91,62,184,100,94,72,109,59,104,74,74,53,31,3235,	0,4754,8939,11713,19689,21969,25834,26112,30782,34402,36489,41821,42010,43372,45399,50779,52565,57676,60861,
#Partially deleted in new
chr2	112055719	112081411	chr2:112055719-112081411	0	+	112055719	112081071	789624	6	37,61,92,132,62,77,	0,4257,8442,11216,25337,25615,
#Partially deleted in new
chr2	112055719	112081411	chr2:112055719-112081411	0	+	112055719	112081411	789624	7	37,61,92,132,91,62,77,	0,4257,8442,11216,21472,25337,25615,
#Partially deleted in new
chr2	112086023	112105910	chr2:112086023-112105910	0	+	112086023	112086023	8553170	8	81,94,72,109,59,104,74,44,	0,3601,5688,11020,11209,12571,14598,19843,
#Partially deleted in new
chr2	112089624	112097152	chr2:112089624-112097152	0	+	112089624	112097152	8553170	3	94,72,109,	0,5603,7419,
#Partially deleted in new
chr2	112089631	112116339	chr2:112089631-112116339	0	+	112089631	112089631	8553170	5	87,72,109,59,256,	0,2080,7412,7601,26452,
#Partially deleted in new
chr2	112095188	112119318	chr2:112095188-112119318	1	+	112097067	112116143	8553170	9	111,109,59,104,74,74,53,31,3235,	0,1855,2044,3406,5433,10813,12599,17710,20895,
#Partially deleted in new
chr2	112138384	112188216	chr2:112138384-112188216	3	+	112138655	112187506	789624	8	346,160,171,126,138,138,139,1083,	0,21291,26616,37329,43354,44406,46816,48749,
#Partially deleted in new
chr2	112138425	112188198	chr2:112138425-112188198	1	+	112138655	112187540	789624	8	305,160,171,126,138,138,139,812,	0,21250,26575,37288,43313,44365,46775,48961,
#Partially deleted in new
chr2	112138582	112187645	chr2:112138582-112187645	1	+	112138655	112187506	789624	7	148,160,171,126,138,139,512,	0,21093,26418,37131,44208,46618,48551,
#Partially deleted in new
chr2	112138582	112187639	chr2:112138582-112187639	1	+	112138655	112187506	789624	5	148,160,171,139,506,	0,21093,26418,46618,48551,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	112151298	112178020	chr2:112151298-112178020	0	+	112151298	112151298	8553170	4	1960,160,171,2307,	0,8377,13702,24415,
#Partially deleted in new
chr2	112159747	112187323	chr2:112159747-112187323	0	+	112159747	112187323	789624	6	88,126,138,138,139,190,	0,15966,21991,23043,25453,27386,
#Partially deleted in new
chr2	112181882	112188199	chr2:112181882-112188199	0	+	112181882	112187506	789624	4	136,138,139,1066,	0,908,3318,5251,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	112188363	112190635	chr2:112188363-112190635	3	+	112188363	112188363	8553170	1	2272,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	112211524	112255111	chr2:112211524-112255111	3	-	112230917	112254981	789624	9	4944,48,110,112,117,134,214,82,204,	0,19378,20313,21735,22595,25037,26790,38666,43383,
#Partially deleted in new
chr2	112215864	112255087	chr2:112215864-112255087	1	-	112230917	112254981	789624	9	604,48,108,114,117,134,214,82,180,	0,15038,15973,17393,18255,20697,22450,34326,39043,
#Partially deleted in new
chr2	112215875	112255025	chr2:112215875-112255025	1	-	112216464	112254981	789624	10	593,20,27,108,114,117,134,214,82,118,	0,15027,15048,15962,17382,18244,20686,22439,34315,39032,
#Partially deleted in new
chr2	112215904	112231885	chr2:112215904-112231885	0	-	112215904	112215904	8553170	3	564,248,48,	0,14798,15933,
#Partially deleted in new
chr2	112233325	112255023	chr2:112233325-112255023	0	-	112233325	112233325	8553170	7	46,117,134,214,82,130,124,	0,794,3236,4989,16865,20644,21574,
#Partially deleted in new
chr2	112233334	112238591	chr2:112233334-112238591	0	-	112233334	112233334	8553170	4	37,117,134,277,	0,785,3227,4980,
#Partially deleted in new
chr2	112236585	112255136	chr2:112236585-112255136	0	-	112236585	112236585	8553170	5	110,214,125,82,23,	0,1729,3782,13605,18528,
#Partially deleted in new
chr2	112250106	112255060	chr2:112250106-112255060	0	-	112250106	112250106	8553170	2	166,153,	0,4801,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	112275593	112340059	chr2:112275593-112340059	3	+	112275994	112332488	789624	12	433,181,123,277,134,117,112,110,254,512,234,9055,	0,24255,27635,34291,36210,40876,41627,46162,47055,48558,49370,55411,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	112275600	112340063	chr2:112275600-112340063	1	+	112275994	112332488	789624	12	426,181,123,277,134,117,114,108,254,512,234,9059,	0,24248,27628,34284,36203,40869,41620,46157,47048,48551,49363,55404,
#Deleted in new
chr2	112286056	112286422	chr2:112286056-112286422	7	-	112286056	112286056	16724991	1	366,	0,
#Partially deleted in new
chr2	112299855	112312192	chr2:112299855-112312192	0	+	112299855	112299855	8553170	4	174,123,277,389,	0,3373,10029,11948,
#Deleted in new
chr2	112332141	112334261	chr2:112332141-112334261	0	+	112332141	112332141	8553170	2	141,285,	0,1835,
#Deleted in new
chr2	112346010	112346258	chr2:112346010-112346258	7	+	112346010	112346010	16724991	1	248,	0,
#Partially deleted in new
chr2	112370091	112433645	chr2:112370091-112433645	3	-	112370177	112433453	789624	23	121,202,140,2224,95,136,84,180,147,138,159,124,176,182,210,88,196,146,231,153,112,68,264,	0,7961,10732,17932,20883,24526,27830,28007,29131,29540,29944,31025,31316,31575,33874,36205,42339,47101,47592,51868,52456,54148,63290,
#Partially deleted in new
chr2	112370091	112434488	chr2:112370091-112434488	1	-	112370177	112424301	789624	22	121,202,140,2224,95,136,84,180,147,138,159,124,176,182,210,88,231,153,112,68,133,441,	0,7961,10732,17932,20883,24526,27830,28007,29131,29540,29944,31025,31316,31575,33874,36205,47592,51868,52456,54148,63530,63956,
#Partially deleted in new
chr2	112390149	112422019	chr2:112390149-112422019	0	-	112412620	112422019	789624	16	98,95,136,84,180,147,138,159,144,176,182,65,88,196,231,60,	0,825,4468,7772,7949,9073,9482,9886,10967,11258,11517,13816,16147,22281,27534,31810,
#Partially deleted in new
chr2	112393050	112433530	chr2:112393050-112433530	1	-	112393106	112433453	789624	19	169,136,84,180,147,138,159,124,176,182,210,88,196,146,231,153,112,68,149,	0,1567,4871,5048,6172,6581,6985,8066,8357,8616,10915,13246,19380,24142,24633,28909,29497,31189,40331,
#Partially deleted in new
chr2	112400094	112401560	chr2:112400094-112401560	0	-	112400094	112400094	8553170	2	100,444,	0,1022,
#Partially deleted in new
chr2	112417776	112433519	chr2:112417776-112433519	0	-	112417776	112433434	789624	4	138,153,112,138,	0,4183,4771,15605,
#Deleted in new
chr2	112421535	112422616	chr2:112421535-112422616	0	-	112421535	112421535	8553170	2	577,69,	0,1012,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	112439311	112469687	chr2:112439311-112469687	7	-	112439311	112439311	16724991	4	538,216,46,140,	0,1084,24679,30236,
#Deleted in new
chr2	112440395	112440601	chr2:112440395-112440601	5	-	112440395	112440395	16724991	1	206,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	112482153	112541739	chr2:112482153-112541739	3	+	112482344	112528795	789624	7	348,79,233,136,270,144,13059,	0,3763,11989,19052,20758,38128,46527,
#Deleted in new
chr2	112482198	112483930	chr2:112482198-112483930	0	+	112482198	112482198	8553170	2	303,791,	0,941,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	112501285	112520680	chr2:112501285-112520680	0	+	112501285	112501285	8553170	3	56,270,399,	0,1626,18996,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	112522150	112532411	chr2:112522150-112532411	0	+	112522150	112522150	8553170	2	417,3731,	0,6530,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	112541914	112576299	chr2:112541914-112576299	3	+	112542494	112575729	789624	15	757,168,147,133,137,224,172,172,282,134,171,157,197,254,1453,	0,5097,5506,7352,8951,9860,10730,15995,17378,22451,26052,26831,30647,31647,32932,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	112541914	112577150	chr2:112541914-112577150	1	+	112550873	112575729	789624	12	757,137,224,172,172,282,134,171,157,197,254,2304,	0,8951,9860,10730,15995,17378,22451,26052,26831,30647,31647,32932,
#Partially deleted in new
chr2	112542018	112547461	chr2:112542018-112547461	0	+	112542494	112547461	789624	4	70,276,168,41,	0,377,4993,5402,
#Partially deleted in new
chr2	112542035	112547176	chr2:112542035-112547176	0	+	112542494	112547176	789624	3	131,276,165,	0,360,4976,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	112542035	112577150	chr2:112542035-112577150	1	+	112542151	112575729	789624	16	131,276,168,147,133,137,224,172,172,282,134,171,157,197,254,2304,	0,360,4976,5385,7231,8830,9739,10609,15874,17257,22330,25931,26710,30526,31526,32811,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	112542188	112576299	chr2:112542188-112576299	0	+	112542494	112545875	789624	16	483,92,168,147,133,137,224,172,172,282,134,171,157,197,254,1453,	0,3642,4823,5232,7078,8677,9586,10456,15721,17104,22177,25778,26557,30373,31373,32658,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	112542225	112577058	chr2:112542225-112577058	1	+	112542494	112575729	789624	13	446,168,147,133,137,224,172,39,171,157,197,254,2212,	0,4786,5195,7041,8640,9549,10419,22140,25741,26520,30336,31336,32621,
#Partially deleted in new
chr2	112542273	112576029	chr2:112542273-112576029	0	+	112542494	112567973	789624	7	398,134,171,157,197,254,1183,	0,22092,25693,26472,30288,31288,32573,
#Partially deleted in new
chr2	112542418	112551979	chr2:112542418-112551979	0	+	112542494	112550886	789624	3	253,137,205,	0,8447,9356,
#Partially deleted in new
chr2	112542449	112549358	chr2:112542449-112549358	0	+	112542494	112547425	789624	4	222,97,147,92,	0,4633,4971,6817,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	112542464	112576295	chr2:112542464-112576295	1	+	112542494	112575729	789624	14	207,147,133,137,224,172,172,282,134,171,157,197,254,1449,	0,4956,6802,8401,9310,10180,15445,16828,21901,25502,26281,30097,31097,32382,
#Partially deleted in new
chr2	112542674	112549360	chr2:112542674-112549360	0	+	112542674	112542674	8553170	5	110,168,147,68,94,	0,4337,4746,5471,6592,
#Partially deleted in new
chr2	112546933	112550908	chr2:112546933-112550908	0	+	112546933	112546933	8553170	4	246,147,133,43,	0,487,2333,3932,
#Partially deleted in new
chr2	112550706	112552804	chr2:112550706-112552804	0	+	112550706	112550706	8553170	3	296,224,160,	0,1068,1938,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	112553384	112559395	chr2:112553384-112559395	0	+	112553384	112553384	8553170	4	306,55,172,103,	0,1139,4525,5908,
#Partially deleted in new
chr2	112564313	112572598	chr2:112564313-112572598	0	+	112564313	112564313	8553170	4	186,171,157,37,	0,3653,4432,8248,
#Partially deleted in new
chr2	112564361	112575089	chr2:112564361-112575089	0	+	112564361	112575089	789624	5	138,171,117,254,243,	0,3605,8280,9200,10485,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	112579483	112579584	chr2:112579483-112579584	3	-	112579483	112579483	8553170	1	101,	0,
#Partially deleted in new
chr2	112584239	112586365	chr2:112584239-112586365	0	+	112584239	112584239	8553170	3	247,141,166,	0,1734,1960,
#Partially deleted in new
chr2	112584440	112589040	chr2:112584440-112589040	3	+	112584647	112588889	0	4	209,141,166,175,	0,1533,1759,4425,
#Partially deleted in new
chr2	112584468	112589040	chr2:112584468-112589040	0	+	112584647	112586118	789624	3	181,392,175,	0,1505,4397,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	112584594	112589275	chr2:112584594-112589275	1	+	112584647	112586533	0	3	55,141,3076,	0,1379,1605,
#Partially deleted in new
chr2	112584871	112589040	chr2:112584871-112589040	0	+	112584871	112584871	8553170	4	47,141,166,175,	0,1102,1328,3994,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	112590795	112591939	chr2:112590795-112591939	3	+	112590795	112590795	8553170	2	85,444,	0,700,
#Deleted in new
chr2	112621808	112622167	chr2:112621808-112622167	7	-	112621808	112621808	16724991	1	359,	0,
#Partially deleted in new
chr2	112641831	112645690	chr2:112641831-112645690	3	-	112641831	112641831	789624	5	151,107,115,57,1592,	0,251,1347,2127,2267,
#Partially deleted in new
chr2	112645856	112663827	chr2:112645856-112663827	3	+	112646828	112663025	789624	11	273,600,141,86,97,120,270,559,186,85,964,	0,706,1467,1796,6845,11265,12968,13347,14530,15285,17007,
#Partially deleted in new
chr2	112647446	112653355	chr2:112647446-112653355	0	+	112647446	112652956	789624	4	18,86,97,467,	0,206,5255,5442,
#Partially deleted in new
chr2	112647622	112659292	chr2:112647622-112659292	0	+	112647622	112647622	8553170	5	116,97,120,270,89,	0,5079,9499,11202,11581,
#Partially deleted in new
chr2	112647701	112659443	chr2:112647701-112659443	0	+	112647701	112659443	789624	5	37,97,120,144,240,	0,5000,9420,11249,11502,
#Partially deleted in new
chr2	112647703	112659087	chr2:112647703-112659087	0	+	112647703	112657226	789624	5	35,97,59,120,263,	0,4998,5185,9418,11121,
#Partially deleted in new
chr2	112647717	112659428	chr2:112647717-112659428	0	+	112647717	112659083	789624	5	21,97,120,121,225,	0,4984,9404,11256,11486,
#Partially deleted in new
chr2	112651945	112659327	chr2:112651945-112659327	0	+	112651945	112651945	8553170	5	127,97,120,270,124,	0,756,5176,6879,7258,
#Deleted in new
chr2	112652269	112652972	chr2:112652269-112652972	0	+	112652269	112652269	8553170	2	529,84,	0,619,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	112658362	112663825	chr2:112658362-112663825	0	+	112658362	112658362	8553170	3	1400,840,962,	0,2024,4501,
#Partially deleted in new
chr2	112721485	112742879	chr2:112721485-112742879	3	+	112721536	112742450	789624	17	62,74,118,96,92,58,94,51,84,33,108,67,171,52,61,78,468,	0,332,500,697,1012,1228,1595,1932,2233,2608,3295,3688,3896,4752,5192,8141,20926,
#Deleted in new
chr2	112721817	112722406	chr2:112721817-112722406	0	+	112721817	112721817	8553170	3	74,118,224,	0,168,365,
#Deleted in new
chr2	112722963	112724316	chr2:112722963-112724316	0	+	112722963	112722963	8553170	4	211,51,84,223,	0,454,755,1130,
#Partially deleted in new
chr2	112722963	112731673	chr2:112722963-112731673	0	+	112722963	112722963	8553170	9	211,51,84,1147,171,52,61,78,593,	0,454,755,1130,2418,3274,3714,6663,8117,
#Deleted in new
chr2	112726242	112727284	chr2:112726242-112727284	0	+	112726242	112726242	8553170	2	47,607,	0,435,
#Partially deleted in new
chr2	112729656	112739047	chr2:112729656-112739047	0	+	112729656	112729656	8553170	2	48,135,	0,9256,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	112736606	112764677	chr2:112736606-112764677	3	-	112738822	112764598	789624	9	2442,190,64,156,208,1238,52,67,116,	0,4211,6099,9813,15660,19370,24106,25896,27955,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	112737866	112764617	chr2:112737866-112764617	0	-	112756045	112764598	789624	10	1182,190,64,156,208,158,322,52,67,56,	0,2951,4839,8553,14400,18110,19026,22846,24636,26695,
#Partially deleted in new
chr2	112742430	112756074	chr2:112742430-112756074	0	-	112742430	112742430	8553170	4	339,156,208,98,	0,3989,9836,13546,
#Partially deleted in new
chr2	112756774	112764618	chr2:112756774-112764618	0	-	112756774	112756774	8553170	4	381,52,67,57,	0,3938,5728,7787,
#Partially deleted in new
chr2	112756953	112764664	chr2:112756953-112764664	0	-	112756953	112756953	8553170	3	261,67,103,	0,5549,7608,
#Partially deleted in new
chr2	112757193	112764117	chr2:112757193-112764117	0	-	112757193	112757193	8553170	4	21,52,67,411,	0,3519,5309,6513,
#Partially deleted in new
chr2	112773914	112784590	chr2:112773914-112784590	3	-	112775066	112783770	0	7	1353,125,171,223,49,55,148,	0,4072,5581,7689,8801,9809,10528,
#Partially deleted in new
chr2	112829750	112836903	chr2:112829750-112836903	3	-	112830360	112836229	0	7	823,131,165,202,52,62,196,	0,1541,2911,3623,5815,6432,6957,
#Partially deleted in new
chr2	112830360	112836779	chr2:112830360-112836779	0	-	112830360	112830360	8553170	6	213,131,165,459,52,597,	0,931,2301,2756,5205,5822,
#Deleted in new
chr2	112831135	112833575	chr2:112831135-112833575	0	-	112831135	112831135	8553170	3	287,165,202,	0,1526,2238,
#Partially deleted in new
chr2	112832698	112836816	chr2:112832698-112836816	0	-	112832698	112836229	789624	5	128,202,52,62,137,	0,675,2867,3484,3981,
#Partially deleted in new
chr2	112832751	112836434	chr2:112832751-112836434	0	-	112832751	112836229	789624	4	75,202,52,252,	0,622,2814,3431,
#Partially deleted in new
chr2	112832794	112836702	chr2:112832794-112836702	0	-	112832794	112836229	789624	5	32,202,52,62,232,	0,579,2771,3388,3676,
#Partially deleted in new
chr2	112832912	112836779	chr2:112832912-112836779	0	-	112832912	112832912	8553170	4	663,52,62,72,	0,2653,3270,3795,
#Deleted in new
chr2	112835180	112836779	chr2:112835180-112836779	0	-	112835180	112835180	8553170	3	437,62,72,	0,1002,1527,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	112840327	112844195	chr2:112840327-112844195	3	+	112840327	112840327	8553170	1	3868,	0,
#Partially deleted in new
chr2	112853327	112854122	chr2:112853327-112854122	7	+	112853327	112853327	16724991	1	795,	0,
#Partially deleted in new
chr2	112912970	112918882	chr2:112912970-112918882	3	+	112913012	112918809	0	5	124,63,120,143,322,	0,821,4158,4664,5590,
#Partially deleted in new
chr2	112912970	112918882	chr2:112912970-112918882	1	+	112913012	112918809	0	3	124,143,322,	0,4664,5590,
#Partially deleted in new
chr2	112912970	112918882	chr2:112912970-112918882	1	+	112913012	112918809	0	4	124,120,143,322,	0,4158,4664,5590,
#Partially deleted in new
chr2	112912970	112918882	chr2:112912970-112918882	1	+	112913012	112918809	0	4	124,63,143,322,	0,821,4664,5590,
#Deleted in new
chr2	112915192	112918882	chr2:112915192-112918882	1	+	112915192	112918809	0	4	67,120,143,322,	0,1936,2442,3368,
#Deleted in new
chr2	112932624	112933171	chr2:112932624-112933171	7	+	112932624	112932624	16724991	1	547,	0,
#Partially deleted in new
chr2	112973202	112979280	chr2:112973202-112979280	0	+	112978638	112979280	789624	4	42,193,74,60,	0,4683,5417,6018,
#Deleted in new
chr2	112978018	112985554	chr2:112978018-112985554	1	+	112978638	112985049	0	4	60,74,140,715,	0,601,1990,6821,
#Deleted in new
chr2	112978028	112985665	chr2:112978028-112985665	3	+	112978638	112985049	0	5	50,74,105,140,826,	0,591,1192,1980,6811,
#Deleted in new
chr2	112981165	112981434	chr2:112981165-112981434	7	-	112981165	112981165	16724991	1	269,	0,
#Deleted in new
chr2	112995516	112995937	chr2:112995516-112995937	7	+	112995516	112995516	16724991	1	421,	0,
#Partially deleted in new
chr2	113005460	113008044	chr2:113005460-113008044	3	+	113005871	113008044	789624	4	421,114,140,213,	0,513,1137,2371,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	113022090	113052867	chr2:113022090-113052867	1	-	113022673	113031709	789624	6	687,130,140,108,70,51,	0,4012,6848,8957,9606,30726,
#Partially deleted in new
chr2	113027432	113052867	chr2:113027432-113052867	3	-	113027902	113031709	789624	5	683,140,108,70,51,	0,1506,3615,4264,25384,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	113058637	113064748	chr2:113058637-113064748	3	+	113059438	113062677	0	5	106,56,86,128,2296,	0,774,2214,3486,3815,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	113059107	113064748	chr2:113059107-113064748	1	+	113059438	113062677	0	5	134,56,86,128,2296,	0,304,1744,3016,3345,
#Deleted in new
chr2	113059386	113062560	chr2:113059386-113062560	0	+	113059438	113062560	789624	4	81,86,128,108,	0,1465,2737,3066,
#Partially deleted in new
chr2	113062519	113065382	chr2:113062519-113065382	0	+	113062519	113062677	789624	2	207,468,	0,2395,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	113067969	113075843	chr2:113067969-113075843	3	+	113072738	113075364	0	5	47,60,86,128,692,	0,4741,6359,6753,7182,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	113072317	113075850	chr2:113072317-113075850	1	+	113072738	113075364	0	4	453,86,128,699,	0,2011,2405,2834,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	113074538	113075739	chr2:113074538-113075739	0	+	113074538	113074538	8553170	2	312,588,	0,613,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	113086804	113086911	chr2:113086804-113086911	3	+	113086804	113086804	8553170	1	107,	0,
#Partially deleted in new
chr2	113107213	113117665	chr2:113107213-113117665	0	+	113107213	113107213	8553170	4	172,84,115,129,	0,3902,5786,10323,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	113111115	113134013	chr2:113111115-113134013	1	+	113127726	113132871	0	9	84,115,63,171,52,89,113,805,411,	0,1884,8950,10332,16573,18460,19929,21540,22487,
#Partially deleted in new
chr2	113111115	113115690	chr2:113111115-113115690	0	+	113111115	113111115	8553170	3	84,115,186,	0,1884,4389,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	113117892	113134016	chr2:113117892-113134016	1	+	113127726	113132871	0	6	136,171,52,89,113,1361,	0,3555,9796,11683,13152,14763,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	113117896	113134016	chr2:113117896-113134016	1	+	113118018	113132871	0	6	132,63,52,89,113,1361,	0,2169,9792,11679,13148,14759,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	113117896	113134016	chr2:113117896-113134016	3	+	113118018	113132871	0	5	132,52,89,113,1361,	0,9792,11679,13148,14759,
#Partially deleted in new
chr2	113117980	113130121	chr2:113117980-113130121	0	+	113117980	113117980	8553170	3	48,52,546,	0,9708,11595,
#Partially deleted in new
chr2	113127560	113133121	chr2:113127560-113133121	1	+	113127624	113132871	0	4	180,89,113,466,	0,2015,3484,5095,
#Partially deleted in new
chr2	113127575	113129982	chr2:113127575-113129982	0	+	113127575	113127575	8553170	2	165,407,	0,2000,
#Partially deleted in new
chr2	113157324	113183044	chr2:113157324-113183044	0	+	113157324	113157324	8553170	2	211,699,	0,25021,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	113171534	113175337	chr2:113171534-113175337	3	-	113171534	113171534	8553170	2	491,68,	0,3735,
#Deleted in new
chr2	113173602	113175360	chr2:113173602-113175360	1	-	113173602	113173602	8553170	2	492,91,	0,1667,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	113173970	113203237	chr2:113173970-113203237	3	+	113182456	113201415	789624	17	84,1167,117,76,379,210,81,113,59,90,44,161,71,167,145,144,2080,	0,8375,10986,11394,11906,18409,19077,19287,19621,19888,21756,22176,23593,23776,24769,25112,27187,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	113173971	113185750	chr2:113173971-113185750	0	+	113173971	113173971	8553170	3	83,117,386,	0,10985,11393,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	113173979	113203225	chr2:113173979-113203225	0	+	113173979	113173979	8553170	16	75,1167,117,891,210,81,113,59,90,44,161,71,164,145,144,2068,	0,8366,10977,11385,18400,19068,19278,19612,19879,21747,22167,23584,23770,24760,25103,27178,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	113173996	113209396	chr2:113173996-113209396	1	+	113182456	113201415	789624	17	58,1167,117,76,295,210,81,113,59,90,44,161,71,164,145,144,8239,	0,8349,10960,11368,11964,18383,19051,19261,19595,19862,21730,22150,23567,23753,24743,25086,27161,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	113185043	113201566	chr2:113185043-113201566	0	+	113185043	113185681	789624	15	30,76,594,210,81,113,59,90,44,161,71,167,145,144,409,	0,321,618,7336,8004,8214,8548,8815,10683,11103,12520,12703,13696,14039,16114,
#Partially deleted in new
chr2	113193847	113196607	chr2:113193847-113196607	0	+	113193847	113193847	8553170	3	101,44,461,	0,1879,2299,
#Deleted in new
chr2	113196148	113198189	chr2:113196148-113198189	0	+	113196148	113196148	8553170	3	159,71,440,	0,1415,1601,
#Partially deleted in new
chr2	113196279	113201330	chr2:113196279-113201330	0	+	113196279	113201287	789624	5	28,71,164,144,173,	0,1284,1470,2803,4878,
#Partially deleted in new
chr2	113197194	113202912	chr2:113197194-113202912	0	+	113197194	113197194	8553170	4	719,145,144,1755,	0,1545,1888,3963,
#Partially deleted in new
chr2	113197341	113198830	chr2:113197341-113198830	0	+	113197341	113197341	8553170	3	293,164,91,	0,408,1398,
#Partially deleted in new
chr2	113198557	113202912	chr2:113198557-113202912	0	+	113198557	113198557	8553170	2	669,1755,	0,2600,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	113211521	113239690	chr2:113211521-113239690	1	+	113211521	113211521	8553170	6	98,207,76,101,123,602,	0,4634,14080,18994,26568,27567,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	113215996	113278921	chr2:113215996-113278921	1	-	113218532	113278394	0	12	2613,87,102,189,121,176,123,89,198,166,197,91,	0,4095,11158,19397,20604,25554,26011,26693,28430,30757,62373,62834,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	113215996	113278911	chr2:113215996-113278911	1	-	113220091	113278394	0	10	2613,87,102,176,123,89,198,166,100,81,	0,4095,11158,25554,26011,26693,28430,30757,62373,62834,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	113215996	113278911	chr2:113215996-113278911	1	-	113220091	113278394	0	12	2613,87,102,110,121,176,123,89,198,166,100,81,	0,4095,11158,19397,20604,25554,26011,26693,28430,30757,62373,62834,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	113215996	113278911	chr2:113215996-113278911	1	-	113220091	113278394	0	9	2613,87,176,123,89,198,166,100,81,	0,4095,25554,26011,26693,28430,30757,62373,62834,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	113215996	113278950	chr2:113215996-113278950	3	-	113218532	113278394	0	12	2613,87,102,189,121,176,123,89,198,166,100,120,	0,4095,11158,19397,20604,25554,26011,26693,28430,30757,62373,62834,
#Partially deleted in new
chr2	113218248	113235443	chr2:113218248-113235443	0	-	113220091	113235443	789624	4	361,87,158,50,	0,1843,8850,17145,
#Deleted in new
chr2	113218468	113220477	chr2:113218468-113220477	0	-	113218468	113218468	8553170	2	141,386,	0,1623,
#Partially deleted in new
chr2	113218521	113241779	chr2:113218521-113241779	1	-	113218532	113227248	789624	6	88,87,102,189,121,229,	0,1570,8633,16872,18079,23029,
#Partially deleted in new
chr2	113218527	113241683	chr2:113218527-113241683	0	-	113218532	113241683	789624	5	82,87,102,121,133,	0,1564,8627,18073,23023,
#Partially deleted in new
chr2	113225596	113237508	chr2:113225596-113237508	0	-	113225596	113225596	8553170	3	1660,189,908,	0,9797,11004,
#Deleted in new
chr2	113235344	113236929	chr2:113235344-113236929	0	-	113235344	113235344	8553170	2	238,329,	0,1256,
#Partially deleted in new
chr2	113235424	113263334	chr2:113235424-113263334	1	+	113235424	113235424	8553170	5	146,156,160,321,57,	0,15342,19965,23839,27853,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	113235526	113241410	chr2:113235526-113241410	1	+	113235526	113235526	789624	4	44,123,2013,210,	0,2563,3562,5674,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	113235529	113266170	chr2:113235529-113266170	0	+	113235529	113235529	8553170	5	41,123,160,177,695,	0,2560,19860,27748,29946,
#Partially deleted in new
chr2	113235529	113259579	chr2:113235529-113259579	1	+	113235529	113235529	8553170	4	41,110,160,316,	0,983,19860,23734,
#Partially deleted in new
chr2	113235535	113276581	chr2:113235535-113276581	1	+	113235535	113235535	8553170	5	35,160,321,177,11106,	0,19854,23728,27742,29940,
#Partially deleted in new
chr2	113235535	113265830	chr2:113235535-113265830	0	+	113235535	113235535	8553170	3	35,177,355,	0,27742,29940,
#Partially deleted in new
chr2	113235539	113267004	chr2:113235539-113267004	1	+	113235539	113235539	8553170	6	31,101,160,321,177,1529,	0,973,19850,23724,27738,29936,
#Deleted in new
chr2	113235539	113236357	chr2:113235539-113236357	0	+	113235539	113235539	8553170	2	31,566,	0,252,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	113235539	113263362	chr2:113235539-113263362	0	+	113235539	113235539	8553170	4	31,123,321,85,	0,2550,23724,27738,
#Partially deleted in new
chr2	113235539	113265509	chr2:113235539-113265509	0	+	113235539	113235539	8553170	5	31,110,160,177,34,	0,973,19850,27738,29936,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	113235544	113255534	chr2:113235544-113255534	0	+	113235544	113235544	8553170	4	26,123,140,145,	0,2545,15222,19845,
#Partially deleted in new
chr2	113236236	113267010	chr2:113236236-113267010	0	+	113236236	113236236	8553170	5	377,160,321,177,1535,	0,19153,23027,27041,29239,
#Partially deleted in new
chr2	113236268	113267010	chr2:113236268-113267010	3	+	113236268	113236268	789624	6	354,140,160,321,177,1535,	0,14498,19121,22995,27009,29207,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	113237533	113239908	chr2:113237533-113239908	0	+	113237533	113237533	8553170	2	679,820,	0,1555,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	113237594	113240825	chr2:113237594-113240825	0	+	113237594	113237594	8553170	1	3231,	0,
#Partially deleted in new
chr2	113241077	113278919	chr2:113241077-113278919	0	-	113241077	113241077	8553170	7	649,123,89,198,166,100,89,	0,930,1612,3349,5676,37292,37753,
#Partially deleted in new
chr2	113241550	113278898	chr2:113241550-113278898	0	-	113241550	113242738	789624	5	176,123,89,100,68,	0,457,1139,36819,37280,
#Partially deleted in new
chr2	113250765	113266973	chr2:113250765-113266973	0	+	113250765	113250765	8553170	5	157,160,321,177,1498,	0,4624,8498,12512,14710,
#Partially deleted in new
chr2	113255389	113273699	chr2:113255389-113273699	1	+	113255389	113255389	8553170	6	160,177,105,107,136,643,	0,7888,10086,14811,16446,17667,
#Partially deleted in new
chr2	113259147	113263409	chr2:113259147-113263409	0	+	113259147	113259147	8553170	2	437,132,	0,4130,
#Deleted in new
chr2	113263361	113273164	chr2:113263361-113273164	0	+	113263361	113263361	8553170	4	93,105,136,108,	0,2114,8474,9695,
#Deleted in new
chr2	113406395	113406872	chr2:113406395-113406872	3	+	113406395	113406872	789624	2	55,298,	0,179,
#Deleted in new
chr2	113424494	113425324	chr2:113424494-113425324	3	+	113424494	113424494	8553170	2	81,427,	0,403,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	113432599	113436042	chr2:113432599-113436042	3	+	113432599	113432599	8553170	1	3443,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	113437690	113496189	chr2:113437690-113496189	3	+	113437868	113495743	789624	15	332,87,97,92,60,38,47,87,45,57,52,69,66,130,553,	0,3660,6076,7273,15448,17050,22982,24717,27438,33342,44486,56066,56238,57429,57946,
#Partially deleted in new
chr2	113437762	113496171	chr2:113437762-113496171	1	+	113437868	113495743	789624	14	260,87,97,92,60,38,47,87,45,52,69,66,130,535,	0,3588,6004,7201,15376,16978,22910,24645,27366,44414,55994,56166,57357,57874,
#Partially deleted in new
chr2	113437787	113495797	chr2:113437787-113495797	1	+	113437868	113455570	789624	16	235,87,97,92,60,38,88,47,87,45,57,52,69,66,130,161,	0,3563,5979,7176,15351,16953,17768,22885,24620,27341,33245,44389,55969,56141,57332,57849,
#Partially deleted in new
chr2	113437790	113496119	chr2:113437790-113496119	0	+	113437868	113439042	789624	16	232,98,87,97,92,60,38,47,87,45,57,52,69,66,130,483,	0,1229,3560,5976,7173,15348,16950,22882,24617,27338,33242,44386,55966,56138,57329,57846,
#Partially deleted in new
chr2	113437816	113441729	chr2:113437816-113441729	0	+	113437816	113437816	8553170	2	206,379,	0,3534,
#Partially deleted in new
chr2	113437821	113495799	chr2:113437821-113495799	0	+	113437868	113457085	789624	16	201,87,97,92,60,38,145,47,87,45,57,52,69,66,130,163,	0,3529,5945,7142,15317,16919,19243,22851,24586,27307,33211,44355,55935,56107,57298,57815,
#Partially deleted in new
chr2	113437838	113444375	chr2:113437838-113444375	0	+	113437838	113437838	8553170	3	184,87,609,	0,3512,5928,
#Partially deleted in new
chr2	113437878	113462834	chr2:113437878-113462834	0	+	113437878	113437878	8553170	8	144,87,97,92,60,38,47,427,	0,3472,5888,7085,15260,16862,22794,24529,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	113443761	113445540	chr2:113443761-113445540	0	+	113443761	113443761	8553170	2	102,577,	0,1202,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	113468584	113496119	chr2:113468584-113496119	0	+	113468584	113468584	8553170	6	2505,52,69,66,130,483,	0,13592,25172,25344,26535,27052,
#Partially deleted in new
chr2	113481517	113496121	chr2:113481517-113496121	0	+	113481517	113481517	8553170	3	711,69,2193,	0,12239,12411,
#Deleted in new
chr2	113498664	113501155	chr2:113498664-113501155	3	+	113499256	113500483	789624	1	2491,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	113512462	113515485	chr2:113512462-113515485	3	+	113512462	113512462	8553170	3	132,111,502,	0,975,2521,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	113527567	113542672	chr2:113527567-113542672	0	-	113527567	113527567	8553170	3	85,193,126,	0,8239,14979,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	113528646	113542636	chr2:113528646-113542636	3	-	113528646	113528646	789624	3	456,193,90,	0,7160,13900,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	113528919	113542658	chr2:113528919-113542658	1	-	113528919	113528919	789624	4	183,157,193,112,	0,5640,6887,13627,
#Deleted in new
chr2	113540051	113542665	chr2:113540051-113542665	1	-	113540051	113540051	789624	2	418,119,	0,2495,
#Partially deleted in new
chr2	113541936	113563298	chr2:113541936-113563298	7	+	113541936	113541936	16724991	2	282,163,	0,21199,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	113577381	113578852	chr2:113577381-113578852	0	+	113577381	113577381	8553170	2	361,871,	0,600,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	113577381	113578852	chr2:113577381-113578852	3	+	113577381	113577381	789624	3	361,205,564,	0,600,907,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	113582958	113583096	chr2:113582958-113583096	3	-	113582958	113582958	5263520	1	138,	0,
#Partially deleted in new
chr2	113588549	113599034	chr2:113588549-113599034	7	+	113588549	113588549	16724991	10	154,99,147,137,136,202,159,153,69,428,	0,6513,6819,7143,7518,7831,8121,8936,9848,10057,
#Deleted in new
chr2	113594175	113599043	chr2:113594175-113599043	5	+	113594175	113594175	16724991	7	986,147,511,198,159,153,646,	0,1193,1517,2205,2495,3310,4222,
#Deleted in new
chr2	113599035	113601261	chr2:113599035-113601261	7	-	113599035	113599035	16724991	4	1161,102,85,50,	0,1326,1706,2176,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	113605866	113607908	chr2:113605866-113607908	3	-	113605866	113605866	8553170	1	2042,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	113610501	113627040	chr2:113610501-113627040	7	-	113610501	113610501	16724991	3	1746,121,211,	0,15107,16328,
#Partially deleted in new
chr2	113611683	113627090	chr2:113611683-113627090	5	-	113611683	113611683	16724991	3	564,121,53,	0,13925,15354,
#Partially deleted in new
chr2	113611778	113612247	chr2:113611778-113612247	5	-	113611778	113611778	16724991	1	469,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	113627228	113643396	chr2:113627228-113643396	3	+	113628606	113642129	789624	9	172,160,30,80,80,112,95,84,1366,	0,1325,5686,6924,7822,13665,14127,14552,14802,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	113627239	113643392	chr2:113627239-113643392	1	+	113628606	113642129	789624	7	161,164,30,80,98,84,1362,	0,1310,5675,6913,14113,14541,14791,
#Partially deleted in new
chr2	113627243	113643391	chr2:113627243-113643391	1	+	113628606	113642129	789624	10	157,160,30,80,80,112,98,84,115,202,	0,1310,5671,6909,7807,13650,14109,14537,14787,15946,
#Partially deleted in new
chr2	113627243	113640938	chr2:113627243-113640938	0	+	113628606	113640938	789624	6	157,164,30,80,80,45,	0,1306,5671,6909,7807,13650,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	113627263	113643368	chr2:113627263-113643368	0	+	113628606	113641361	789624	8	137,164,30,80,80,128,84,1338,	0,1286,5651,6889,7787,14089,14517,14767,
#Partially deleted in new
chr2	113627275	113635513	chr2:113627275-113635513	0	+	113627275	113627275	8553170	5	125,164,30,80,486,	0,1274,5639,6877,7752,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	113627282	113643328	chr2:113627282-113643328	0	+	113628606	113634184	789624	8	118,160,30,76,80,98,84,1298,	0,1271,5632,6874,7768,14070,14498,14748,
#Partially deleted in new
chr2	113627286	113637747	chr2:113627286-113637747	0	+	113627286	113627286	8553170	6	114,164,30,80,80,449,	0,1263,5628,6866,7764,10012,
#Partially deleted in new
chr2	113627306	113643391	chr2:113627306-113643391	1	+	113628606	113642129	789624	10	94,160,30,80,80,112,95,84,115,202,	0,1247,5608,6846,7744,13587,14049,14474,14724,15883,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	113627310	113643392	chr2:113627310-113643392	1	+	113628606	113642129	789624	10	90,155,164,30,80,80,112,125,84,1362,	0,545,1239,5604,6842,7740,13583,14045,14470,14720,
#Partially deleted in new
chr2	113627386	113643231	chr2:113627386-113643231	1	+	113628606	113642129	789624	8	14,160,30,80,98,84,115,42,	0,1167,5528,6766,13966,14394,14644,15803,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	113628327	113643392	chr2:113628327-113643392	0	+	113628327	113628327	8553170	8	386,30,80,80,112,98,84,1362,	0,4587,5825,6723,12566,13025,13453,13703,
#Partially deleted in new
chr2	113628569	113634620	chr2:113628569-113634620	0	+	113628569	113628569	8553170	3	144,30,468,	0,4345,5583,
#Partially deleted in new
chr2	113628585	113633895	chr2:113628585-113633895	0	+	113628585	113628585	8553170	2	128,981,	0,4329,
#Partially deleted in new
chr2	113635050	113641388	chr2:113635050-113641388	0	+	113635050	113635050	8553170	2	80,495,	0,5843,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	113637366	113643392	chr2:113637366-113643392	0	+	113637366	113637366	8553170	5	120,112,98,84,1362,	0,3527,3986,4414,4664,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	113640019	113643389	chr2:113640019-113643389	0	+	113640019	113640019	8553170	3	1461,84,1359,	0,1761,2011,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	113640407	113643389	chr2:113640407-113643389	0	+	113640407	113640407	8553170	3	1043,84,1359,	0,1373,1623,
#Partially deleted in new
chr2	113657907	113658675	chr2:113657907-113658675	7	+	113657907	113657907	16724991	1	768,	0,
#Deleted in new
chr2	113667477	113668621	chr2:113667477-113668621	7	-	113667477	113667477	16724991	2	556,142,	0,1002,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	113669165	113673191	chr2:113669165-113673191	3	+	113669165	113669165	8553170	4	36,89,159,323,	0,2672,3414,3703,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	113677701	113704078	chr2:113677701-113704078	3	-	113677701	113677701	8553170	3	82,97,382,	0,10459,25995,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	113681110	113681217	chr2:113681110-113681217	3	+	113681110	113681110	8553170	1	107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	113705010	113723194	chr2:113705010-113723194	0	-	113705010	113705010	8553170	3	538,155,91,	0,14143,18093,
#Partially deleted in new
chr2	113712791	113756823	chr2:113712791-113756823	3	-	113717774	113756409	789624	16	2404,98,155,91,160,105,65,88,82,188,82,63,144,142,91,454,	0,4961,6362,10312,12586,16609,18792,21794,22985,29900,30921,33485,37633,42373,42662,43578,
#Partially deleted in new
chr2	113714352	113756693	chr2:113714352-113756693	0	-	113717774	113755876	789624	17	689,38,98,155,91,160,105,65,88,82,188,82,63,144,142,91,839,	0,805,3400,4801,8751,11025,15048,17231,20233,21424,28339,29360,31924,36072,40812,41101,41502,
#Partially deleted in new
chr2	113714646	113719244	chr2:113714646-113719244	0	-	113717823	113719244	789624	3	549,96,91,	0,3106,4507,
#Partially deleted in new
chr2	113717452	113725477	chr2:113717452-113725477	0	-	113717452	113717452	8553170	4	398,155,91,100,	0,1701,5651,7925,
#Partially deleted in new
chr2	113717752	113729447	chr2:113717752-113729447	0	-	113717752	113717752	8553170	5	98,127,91,160,47,	0,1401,5351,7625,11648,
#Partially deleted in new
chr2	113717774	113755876	chr2:113717774-113755876	1	-	113717774	113755876	789624	15	76,155,91,160,105,65,88,82,188,82,63,144,142,91,22,	0,1379,5329,7603,11626,13809,16811,18002,24917,25938,28502,32650,37390,37679,38080,
#Partially deleted in new
chr2	113717780	113719711	chr2:113717780-113719711	0	-	113717780	113717780	8553170	2	70,558,	0,1373,
#Partially deleted in new
chr2	113719211	113735856	chr2:113719211-113735856	0	-	113719211	113735856	789624	8	97,91,160,105,65,39,88,80,	0,3892,6166,10189,12372,14153,15374,16565,
#Partially deleted in new
chr2	113721289	113721368	chr2:113721289-113721368	3	-	113721289	113721289	5263520	1	79,	0,
#Partially deleted in new
chr2	113723102	113725862	chr2:113723102-113725862	0	-	113723102	113723102	8553170	2	92,485,	0,2275,
#Partially deleted in new
chr2	113741883	113756620	chr2:113741883-113756620	1	-	113742676	113755876	789624	7	996,82,63,144,142,91,766,	0,1829,4393,8541,13281,13570,13971,
#Partially deleted in new
chr2	113741908	113756587	chr2:113741908-113756587	0	-	113741908	113741908	8553170	7	971,82,63,144,142,91,218,	0,1804,4368,8516,13256,13545,14461,
#Deleted in new
chr2	113742599	113743898	chr2:113742599-113743898	0	-	113742599	113742599	8553170	2	280,186,	0,1113,
#Partially deleted in new
chr2	113829389	113831119	chr2:113829389-113831119	3	-	113829389	113829389	8553170	2	148,268,	0,1462,
#Deleted in new
chr2	113831048	113831727	chr2:113831048-113831727	1	-	113831048	113831048	8553170	2	380,198,	0,481,
#Partially deleted in new
chr2	113831187	113843356	chr2:113831187-113843356	3	-	113831187	113831187	8553170	3	241,56,93,	0,342,12076,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	113888202	113889750	chr2:113888202-113889750	3	-	113888202	113888202	8553170	1	1548,	0,
#Partially deleted in new
chr2	113889959	113962596	chr2:113889959-113962596	3	+	113890279	113957455	789624	12	364,56,125,111,96,108,144,174,93,126,84,5237,	0,23212,26924,37385,41341,44319,49999,52226,61519,61760,65663,67400,
#Partially deleted in new
chr2	113890062	113931369	chr2:113890062-113931369	0	+	113916936	113931369	789624	4	261,125,111,69,	0,26821,37282,41238,
#Partially deleted in new
chr2	113890092	113940143	chr2:113890092-113940143	1	+	113890279	113931305	789624	5	231,56,96,108,185,	0,23079,41208,44186,49866,
#Partially deleted in new
chr2	113890097	113942262	chr2:113890097-113942262	0	+	113890279	113927370	789624	7	226,56,111,96,108,144,77,	0,23074,37247,41203,44181,49861,52088,
#Partially deleted in new
chr2	113890597	113957591	chr2:113890597-113957591	1	+	113916936	113957455	789624	12	181,56,125,111,96,108,144,174,93,126,84,232,	0,22574,26286,36747,40703,43681,49361,51588,60881,61122,65025,66762,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	113904085	113905258	chr2:113904085-113905258	3	+	113904085	113904085	8553170	1	1173,	0,
#Partially deleted in new
chr2	113927368	113934640	chr2:113927368-113934640	0	+	113927368	113927368	8553170	3	87,96,362,	0,3932,6910,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	113933855	113940103	chr2:113933855-113940103	0	+	113933855	113933855	8553170	2	531,145,	0,6103,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	113950823	113958589	chr2:113950823-113958589	0	+	113950823	113950823	8553170	3	748,3987,1230,	0,896,6536,
#Partially deleted in new
chr2	113979568	114007302	chr2:113979568-114007302	3	+	113979568	113979568	789624	2	560,284,	0,27450,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	113979908	113983258	chr2:113979908-113983258	3	+	113979908	113979908	8553170	2	220,595,	0,2755,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	114005439	114005655	chr2:114005439-114005655	3	-	114005439	114005439	8553170	1	216,	0,
#Deleted in new
chr2	114122273	114123293	chr2:114122273-114123293	3	-	114122273	114122273	8553170	2	189,276,	0,744,
#Deleted in new
chr2	114260049	114261226	chr2:114260049-114261226	7	-	114260049	114260049	16724991	1	1177,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	114420124	114420302	chr2:114420124-114420302	3	+	114420124	114420124	8553170	1	178,	0,
#Partially deleted in new
chr2	114442298	115845752	chr2:114442298-115845752	3	+	114442778	115842345	0	26	540,115,96,95,75,53,82,121,155,98,124,39,108,92,48,122,48,99,70,195,55,100,59,73,74,3542,	0,866940,901518,1057211,1083599,1247388,1247541,1285517,1297440,1303787,1310875,1320273,1325998,1334909,1335488,1338575,1340053,1348782,1348988,1372494,1373376,1393858,1394208,1394375,1398451,1399912,
#Partially deleted in new
chr2	114442298	115499569	chr2:114442298-115499569	0	+	115309328	115499569	789624	5	540,72,115,96,60,	0,607849,866940,901518,1057211,
#Partially deleted in new
chr2	114461576	115580243	chr2:114461576-115580243	0	+	114461576	114461576	8553170	8	564,32,58,115,96,95,75,1130,	0,1818,245540,847662,882240,1037933,1064321,1117537,
#Partially deleted in new
chr2	114461602	115843327	chr2:114461602-115843327	1	+	115309328	115842345	0	27	538,32,115,96,95,75,53,82,121,155,98,124,39,108,92,48,122,48,99,70,195,55,100,59,73,74,1117,	0,1792,847636,882214,1037907,1064295,1228084,1228237,1266213,1278136,1284483,1291571,1300969,1306694,1315605,1316184,1319271,1320749,1329478,1329684,1353190,1354072,1374554,1374904,1375071,1379147,1380608,
#Partially deleted in new
chr2	114828431	114833548	chr2:114828431-114833548	3	-	114828431	114828431	789624	2	441,224,	0,4893,
#Deleted in new
chr2	114833829	114835588	chr2:114833829-114835588	3	-	114833829	114833829	8553170	2	209,415,	0,1344,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	115064572	115066818	chr2:115064572-115066818	0	+	115064572	115064572	8553170	3	233,65,159,	0,975,2087,
#Partially deleted in new
chr2	115064671	115739829	chr2:115064671-115739829	0	+	115064757	115739829	789624	9	134,115,96,95,75,53,82,121,91,	0,244567,279145,434838,461226,625015,625168,663144,675067,
#Partially deleted in new
chr2	115144047	115161343	chr2:115144047-115161343	1	-	115144047	115144047	789624	3	321,169,240,	0,811,17056,
#Partially deleted in new
chr2	115161601	115842345	chr2:115161601-115842345	1	+	115161956	115842345	0	26	427,115,96,95,75,53,82,121,155,98,124,39,108,92,48,122,48,99,70,195,55,100,59,73,74,135,	0,147637,182215,337908,364296,528085,528238,566214,578137,584484,591572,600970,606695,615606,616185,619272,620750,629479,629685,653191,654073,674555,674905,675072,679148,680609,
#Partially deleted in new
chr2	115162106	115842900	chr2:115162106-115842900	1	+	115162233	115842345	0	26	166,115,96,95,75,53,82,121,155,98,124,39,108,92,48,122,48,99,70,195,55,100,59,73,74,690,	0,147132,181710,337403,363791,527580,527733,565709,577632,583979,591067,600465,606190,615101,615680,618767,620245,628974,629180,652686,653568,674050,674400,674567,678643,680104,
#Partially deleted in new
chr2	115162154	115526386	chr2:115162154-115526386	0	+	115162154	115162154	8553170	5	118,115,96,95,489,	0,147084,181662,337355,363743,
#Partially deleted in new
chr2	115162233	115689881	chr2:115162233-115689881	0	+	115162233	115499557	789624	7	39,96,95,75,153,53,42,	0,181583,337276,363664,416880,527453,527606,
#Partially deleted in new
chr2	115234455	115525972	chr2:115234455-115525972	0	+	115309328	115525972	789624	5	184,115,96,95,75,	0,74783,109361,265054,291442,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	115440871	115739765	chr2:115440871-115739765	0	+	115440871	115440871	8553170	7	93,95,75,53,82,121,27,	0,58638,85026,248815,248968,286944,298867,
#Deleted in new
chr2	115468055	115468938	chr2:115468055-115468938	7	+	115468055	115468055	16724991	1	883,	0,
#Partially deleted in new
chr2	115814662	115836682	chr2:115814662-115836682	0	+	115814662	115814662	8553170	5	325,55,100,59,9,	0,1012,21494,21844,22011,
#Deleted in new
chr2	116687217	116687387	chr2:116687217-116687387	7	-	116687217	116687217	16724991	1	170,	0,
#Deleted in new
chr2	116726452	116726771	chr2:116726452-116726771	7	-	116726452	116726452	16724991	1	319,	0,
#Deleted in new
chr2	116751157	116751648	chr2:116751157-116751648	7	+	116751157	116751157	16724991	1	491,	0,
#Deleted in new
chr2	116818085	116818761	chr2:116818085-116818761	7	+	116818085	116818085	16724991	1	676,	0,
#Deleted in new
chr2	117023917	117024867	chr2:117023917-117024867	7	+	117023917	117023917	16724991	1	950,	0,
#Deleted in new
chr2	117025076	117026118	chr2:117025076-117026118	7	+	117025076	117025076	16724991	1	1042,	0,
#Deleted in new
chr2	117026536	117027024	chr2:117026536-117027024	7	+	117026536	117026536	16724991	1	488,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	117139714	117139775	chr2:117139714-117139775	3	-	117139714	117139714	8553170	1	61,	0,
#Partially deleted in new
chr2	117180891	117181562	chr2:117180891-117181562	7	-	117180891	117180891	16724991	2	284,72,	0,599,
#Partially deleted in new
chr2	117814649	117832379	chr2:117814649-117832379	3	+	117814777	117830724	0	14	213,285,144,136,101,200,115,140,162,153,114,57,178,1798,	0,2794,4999,6511,7000,7212,7497,9919,10290,10797,11619,14299,14639,15932,
#Partially deleted in new
chr2	117815057	117824599	chr2:117815057-117824599	0	+	117815057	117815057	8553170	9	35,36,285,144,136,101,200,115,31,	0,630,2386,4591,6103,6592,6804,7089,9511,
#Deleted in new
chr2	117821975	117822780	chr2:117821975-117822780	0	+	117821975	117821975	8553170	2	86,634,	0,171,
#Partially deleted in new
chr2	117822146	117828965	chr2:117822146-117828965	0	+	117822146	117828965	789624	6	115,140,105,153,114,17,	0,2422,2850,3300,4122,6802,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	117824336	117832370	chr2:117824336-117832370	0	+	117824336	117824336	8553170	5	372,162,153,3198,1789,	0,603,1110,1932,6245,
#Deleted in new
chr2	117824996	117825983	chr2:117824996-117825983	0	+	117824996	117824996	8553170	2	105,537,	0,450,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	117833936	117841658	chr2:117833936-117841658	3	+	117833936	117833936	8553170	2	613,2477,	0,5245,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	117836349	117838204	chr2:117836349-117838204	1	+	117836349	117836349	8553170	3	175,246,547,	0,305,1308,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	117837743	117839389	chr2:117837743-117839389	0	+	117837743	117837743	8553170	2	241,183,	0,1463,
#Partially deleted in new
chr2	117859426	117903338	chr2:117859426-117903338	5	+	117859426	117859426	16724991	2	818,336,	0,43576,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	117860332	117934942	chr2:117860332-117934942	7	+	117860332	117860332	16724991	8	113,69,99,159,113,105,270,265,	0,42670,59789,61327,70327,70852,71074,74345,
#Partially deleted in new
chr2	117915477	118014133	chr2:117915477-118014133	1	-	117920342	118013995	789624	24	4919,114,85,38,83,109,63,54,72,82,74,63,117,87,51,93,34,101,57,99,112,95,114,180,	0,15559,20017,21224,23551,25711,28546,30051,31333,32627,33844,36895,42887,58430,59372,59710,62516,70491,79968,80786,85343,91244,93067,98476,
#Partially deleted in new
chr2	117915477	118014133	chr2:117915477-118014133	3	-	117920342	118013995	789624	24	4919,114,85,38,83,109,63,54,72,82,74,63,117,87,51,93,37,101,57,99,112,95,114,180,	0,15559,20017,21224,23551,25711,28546,30051,31333,32627,33844,36895,42887,58430,59372,59710,62516,70491,79968,80786,85343,91244,93067,98476,
#Partially deleted in new
chr2	117920304	117948179	chr2:117920304-117948179	0	-	117944076	117948179	789624	11	92,114,85,38,83,109,63,65,54,72,75,	0,10732,15190,16397,18724,20884,23719,24428,25224,26506,27800,
#Partially deleted in new
chr2	117931042	117935838	chr2:117931042-117935838	0	-	117931042	117931042	8553170	2	108,344,	0,4452,
#Deleted in new
chr2	117934024	117934789	chr2:117934024-117934789	7	-	117934024	117934024	16724991	2	72,280,	0,485,
#Deleted in new
chr2	117935497	117936901	chr2:117935497-117936901	0	-	117935497	117935497	8553170	2	82,200,	0,1204,
#Partially deleted in new
chr2	117936511	117944080	chr2:117936511-117944080	0	-	117936511	117936511	8553170	4	228,83,109,57,	0,2517,4677,7512,
#Deleted in new
chr2	117948032	117952412	chr2:117948032-117952412	0	-	117948032	117948032	8553170	3	154,74,40,	0,1289,4340,
#Partially deleted in new
chr2	117951488	117996289	chr2:117951488-117996289	0	-	117951488	117951488	8553170	10	213,63,114,87,51,93,37,101,57,26,	0,884,6876,22419,23361,23699,26505,34480,43957,44775,
#Partially deleted in new
chr2	117995396	117997035	chr2:117995396-117997035	1	+	117995396	117995396	8553170	2	394,689,	0,950,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	117995451	118001137	chr2:117995451-118001137	0	-	117995451	117995451	8553170	3	51,99,317,	0,812,5369,
#Partially deleted in new
chr2	117995674	117997711	chr2:117995674-117997711	0	+	117995674	117995674	8553170	2	50,640,	0,1397,
#Partially deleted in new
chr2	117996723	118054716	chr2:117996723-118054716	3	+	117996723	117996723	8553170	6	569,207,122,140,188,22,	0,15770,16095,35034,35448,57971,
#Partially deleted in new
chr2	117997016	118012719	chr2:117997016-118012719	1	+	117997016	117997016	8553170	3	276,284,226,	0,11654,15477,
#Deleted in new
chr2	117997062	117998322	chr2:117997062-117998322	0	+	117997062	117997062	8553170	2	230,421,	0,839,
#Partially deleted in new
chr2	117997853	118000872	chr2:117997853-118000872	0	+	117997853	117997853	8553170	2	413,145,	0,2874,
#Partially deleted in new
chr2	117997940	118000248	chr2:117997940-118000248	1	+	117997940	117997940	8553170	2	427,426,	0,1882,
#Partially deleted in new
chr2	117998252	118031808	chr2:117998252-118031808	0	+	117998252	117998252	8553170	4	115,207,122,51,	0,14241,14566,33505,
#Deleted in new
chr2	117998744	117999480	chr2:117998744-117999480	3	+	117998744	117998744	8553170	1	736,	0,
#Partially deleted in new
chr2	118012500	118025389	chr2:118012500-118025389	0	+	118012500	118012500	8553170	3	200,122,142,	0,318,12747,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	118014173	118015673	chr2:118014173-118015673	3	+	118014173	118014173	8553170	1	1500,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	118016384	118016669	chr2:118016384-118016669	3	+	118016384	118016384	8553170	1	285,	0,
#Partially deleted in new
chr2	118031839	118055033	chr2:118031839-118055033	0	+	118031839	118031839	8553170	3	58,188,314,	0,332,22880,
#Partially deleted in new
chr2	118088451	118108372	chr2:118088451-118108372	0	+	118103310	118106845	789624	5	90,125,167,100,92,	0,14745,18285,18638,19829,
#Partially deleted in new
chr2	118088473	118110028	chr2:118088473-118110028	3	+	118096556	118108322	0	6	68,382,125,167,100,1748,	0,7945,14723,18263,18616,19807,
#Partially deleted in new
chr2	118088473	118110020	chr2:118088473-118110020	0	+	118088473	118088473	8553170	4	68,125,167,1740,	0,14723,18263,19807,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	118088473	118110997	chr2:118088473-118110997	0	+	118088473	118088473	8553170	6	68,8,125,167,100,2717,	0,7945,14723,18263,18616,19807,
#Partially deleted in new
chr2	118088549	118108390	chr2:118088549-118108390	0	+	118088549	118088549	8553170	6	117,8,125,167,100,110,	0,7869,14647,18187,18540,19731,
#Partially deleted in new
chr2	118096417	118108853	chr2:118096417-118108853	1	+	118096556	118108362	789624	6	383,125,167,100,24,548,	0,6779,10319,10672,11863,11888,
#Partially deleted in new
chr2	118102537	118107142	chr2:118102537-118107142	0	+	118102537	118102537	8553170	4	173,125,167,53,	0,659,4199,4552,
#Deleted in new
chr2	118106658	118108467	chr2:118106658-118108467	0	+	118106658	118106658	8553170	3	245,100,187,	0,431,1622,
#Partially deleted in new
chr2	118132127	118186386	chr2:118132127-118186386	0	-	118132127	118132127	8553170	4	245,141,236,156,	0,44637,50959,54103,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	118150289	118186256	chr2:118150289-118186256	1	-	118150289	118150289	8553170	8	461,141,106,114,236,213,53,26,	0,26475,27546,28088,32797,34153,35048,35941,
#Partially deleted in new
chr2	118182938	118186373	chr2:118182938-118186373	0	-	118182938	118182938	789624	3	384,53,143,	0,2399,3292,
#Partially deleted in new
chr2	118182938	118222250	chr2:118182938-118222250	3	-	118182938	118182938	8553170	4	384,197,113,70,	0,14234,14786,39242,
#Partially deleted in new
chr2	118183020	118186386	chr2:118183020-118186386	0	-	118183020	118183020	8553170	2	302,156,	0,3210,
#Partially deleted in new
chr2	118766964	118835110	chr2:118766964-118835110	3	-	118766964	118766964	8553170	4	202,180,57,116,	0,1295,67382,68030,
#Deleted in new
chr2	118833699	118834609	chr2:118833699-118834609	1	-	118833699	118833699	8553170	3	433,57,122,	0,647,788,
#Deleted in new
chr2	118842170	118847678	chr2:118842170-118847678	3	-	118842937	118847167	789624	2	1084,1373,	0,4135,
#Deleted in new
chr2	118843234	118844352	chr2:118843234-118844352	0	-	118843234	118843234	8553170	2	20,429,	0,689,
#Partially deleted in new
chr2	118942165	118994660	chr2:118942165-118994660	3	+	118942300	118994520	789624	17	232,102,225,36,108,45,45,108,99,36,99,63,45,99,45,177,274,	0,26994,27948,29333,32167,32355,35305,35662,39243,39455,39990,40182,48423,49611,50266,50958,52221,
#Partially deleted in new
chr2	118942289	118970339	chr2:118942289-118970339	0	+	118970148	118970339	789624	4	108,133,102,226,	0,2503,26870,27824,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	118949305	118952983	chr2:118949305-118952983	3	-	118949305	118949305	8553170	2	617,394,	0,3284,
#Deleted in new
chr2	118993016	118994658	chr2:118993016-118994658	0	+	118993016	118993016	8553170	2	284,272,	0,1370,
#Deleted in new
chr2	119156242	119158889	chr2:119156242-119158889	3	-	119156801	119158269	789624	2	739,1304,	0,1343,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	119169821	119170115	chr2:119169821-119170115	3	+	119169821	119169821	8553170	1	294,	0,
#Partially deleted in new
chr2	119223830	119265652	chr2:119223830-119265652	1	+	119231012	119263338	0	6	58,415,500,528,165,2596,	0,6789,21658,23848,30853,39226,
#Partially deleted in new
chr2	119223852	119263698	chr2:119223852-119263698	1	+	119245496	119263338	0	5	36,500,528,165,642,	0,21636,23826,30831,39204,
#Partially deleted in new
chr2	119223852	119263698	chr2:119223852-119263698	1	+	119245496	119257645	789624	6	36,500,528,165,232,642,	0,21636,23826,30831,33604,39204,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	119244421	119249071	chr2:119244421-119249071	3	-	119244421	119244421	789624	2	2460,758,	0,3892,
#Partially deleted in new
chr2	119302224	119366742	chr2:119302224-119366742	1	-	119302471	119339959	789624	7	324,82,38,51,145,203,307,	0,9397,15241,18929,37602,37934,64211,
#Partially deleted in new
chr2	119302227	119366828	chr2:119302227-119366828	3	-	119302471	119339959	789624	6	321,82,38,51,145,39,	0,9394,15238,18926,37599,64562,
#Partially deleted in new
chr2	119302443	119366682	chr2:119302443-119366682	1	-	119302471	119339959	789624	6	105,82,38,51,145,326,	0,9178,15022,18710,37383,63913,
#Partially deleted in new
chr2	119302443	119366682	chr2:119302443-119366682	1	-	119302471	119339959	789624	7	105,82,38,51,145,203,326,	0,9178,15022,18710,37383,37715,63913,
#Partially deleted in new
chr2	119321168	119366763	chr2:119321168-119366763	0	-	119321168	119366510	789624	3	36,145,328,	0,18658,45267,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	119338826	119366825	chr2:119338826-119366825	0	-	119338826	119338826	8553170	3	259,145,36,	0,1000,27963,
#Partially deleted in new
chr2	119366920	119372560	chr2:119366920-119372560	3	+	119367051	119372318	0	4	140,118,63,316,	0,1267,3819,5324,
#Partially deleted in new
chr2	119366923	119372550	chr2:119366923-119372550	1	+	119367051	119372318	789624	4	167,118,63,306,	0,1264,3816,5321,
#Partially deleted in new
chr2	119366923	119372550	chr2:119366923-119372550	1	+	119367584	119372318	0	5	167,86,118,63,306,	0,635,1264,3816,5321,
#Deleted in new
chr2	119366934	119368845	chr2:119366934-119368845	0	+	119366934	119366934	8553170	2	126,658,	0,1253,
#Partially deleted in new
chr2	119366976	119372407	chr2:119366976-119372407	1	+	119367051	119372318	0	5	84,126,118,63,163,	0,426,1211,3763,5268,
#Partially deleted in new
chr2	119366988	119372481	chr2:119366988-119372481	1	+	119367584	119372318	0	5	72,86,118,63,237,	0,570,1199,3751,5256,
#Partially deleted in new
chr2	119367047	119372407	chr2:119367047-119372407	1	+	119367283	119372318	789624	5	287,126,118,63,163,	0,290,1140,3692,5197,
#Partially deleted in new
chr2	119367069	119372546	chr2:119367069-119372546	1	+	119367584	119372318	0	5	145,86,118,63,302,	0,489,1118,3670,5175,
#Partially deleted in new
chr2	119367080	119372454	chr2:119367080-119372454	0	+	119367080	119367080	5263520	4	383,118,63,210,	0,1107,3659,5164,
#Partially deleted in new
chr2	119367252	119372407	chr2:119367252-119372407	1	+	119367336	119372318	0	4	276,118,63,163,	0,935,3487,4992,
#Partially deleted in new
chr2	119367676	119372407	chr2:119367676-119372407	1	+	119367919	119372318	0	4	255,118,63,163,	0,511,3063,4568,
#Deleted in new
chr2	119370216	119372500	chr2:119370216-119372500	0	+	119370216	119370216	8553170	2	586,256,	0,2028,
#Partially deleted in new
chr2	119429900	119437599	chr2:119429900-119437599	1	+	119429926	119437440	789624	2	83,711,	0,6988,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	119430043	119437050	chr2:119430043-119437050	0	+	119430365	119437050	789624	2	360,162,	0,6845,
#Deleted in new
chr2	119431868	119438520	chr2:119431868-119438520	3	+	119431903	119437440	789624	2	56,1632,	0,5020,
#Deleted in new
chr2	119432089	119437547	chr2:119432089-119437547	0	+	119432089	119432089	8553170	2	161,659,	0,4799,
#Partially deleted in new
chr2	119439842	119524494	chr2:119439842-119524494	3	-	119440116	119524226	789624	13	415,42,127,92,70,61,154,133,98,104,108,121,340,	0,1715,6916,8846,12167,13444,22004,24280,25946,33610,38968,54585,84312,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	119439844	119479889	chr2:119439844-119479889	0	-	119439844	119439844	8553170	10	413,42,127,92,70,61,154,133,104,1079,	0,1713,6914,8844,12165,13442,22002,24278,33608,38966,
#Deleted in new
chr2	119439844	119441663	chr2:119439844-119441663	0	-	119439844	119439844	8553170	2	413,106,	0,1713,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	119461982	119525301	chr2:119461982-119525301	0	-	119461982	119525260	789624	8	18,133,98,104,108,121,64,124,	0,2140,3806,11470,16828,32445,33491,63195,
#Partially deleted in new
chr2	119461982	119525041	chr2:119461982-119525041	0	-	119461982	119478907	789624	8	18,133,98,104,108,125,121,213,	0,2140,3806,11470,16828,18706,32445,62846,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	119476447	119487346	chr2:119476447-119487346	3	+	119476447	119476447	789624	2	511,1508,	0,9391,
#Partially deleted in new
chr2	119476689	119486009	chr2:119476689-119486009	1	+	119476689	119476689	8553170	3	260,70,171,	0,8029,9149,
#Partially deleted in new
chr2	119544431	119656661	chr2:119544431-119656661	0	+	119546131	119602636	789624	25	79,186,101,87,99,101,104,160,145,121,112,109,88,90,99,106,134,81,108,135,159,92,93,96,300,	0,1653,4653,15257,15496,17582,42687,56786,58186,60240,60444,60749,64070,67221,71179,81151,83221,85443,86138,86335,93827,95349,102526,107542,111930,
#Partially deleted in new
chr2	119544448	119631086	chr2:119544448-119631086	0	+	119546131	119559711	789624	18	62,186,87,99,101,104,160,121,112,109,88,90,99,106,134,81,108,320,	0,1636,15240,15479,17565,42670,56769,60223,60427,60732,64053,67204,71162,81134,83204,85426,86121,86318,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	119544448	119559977	chr2:119544448-119559977	0	+	119546131	119556201	789624	6	62,186,101,203,87,50,	0,1636,4636,11588,15240,15479,
#Partially deleted in new
chr2	119544467	119562114	chr2:119544467-119562114	0	+	119546131	119562114	789624	7	43,162,186,101,87,99,101,	0,644,1617,4617,15221,15460,17546,
#Partially deleted in new
chr2	119544470	119656661	chr2:119544470-119656661	3	+	119546131	119656470	789624	24	40,186,101,87,99,101,104,160,121,112,109,88,90,99,106,134,81,108,135,159,92,93,96,300,	0,1614,4614,15218,15457,17543,42648,56747,60201,60405,60710,64031,67182,71140,81112,83182,85404,86099,86296,93788,95310,102487,107503,111891,
#Partially deleted in new
chr2	119544470	119562066	chr2:119544470-119562066	0	+	119546131	119557040	789624	7	40,186,101,398,87,99,53,	0,1614,4614,12537,15218,15457,17543,
#Partially deleted in new
chr2	119544484	119573470	chr2:119544484-119573470	1	+	119546131	119572575	789624	7	26,186,101,87,99,101,932,	0,1600,4600,15204,15443,17529,28054,
#Partially deleted in new
chr2	119546162	119580950	chr2:119546162-119580950	0	+	119546162	119580204	789624	6	108,101,87,99,101,771,	0,2922,13526,13765,15851,34017,
#Partially deleted in new
chr2	119559750	119601578	chr2:119559750-119601578	0	+	119559750	119559750	8553170	4	25,99,104,361,	0,177,27368,41467,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	119586691	119601445	chr2:119586691-119601445	0	+	119586691	119586691	8553170	2	531,228,	0,14526,
#Deleted in new
chr2	119587128	119590253	chr2:119587128-119590253	0	+	119587128	119589651	789624	2	94,649,	0,2476,
#Partially deleted in new
chr2	119602662	119627752	chr2:119602662-119627752	0	+	119602662	119602662	8553170	8	100,121,112,109,90,99,106,100,	0,2009,2213,2518,8990,12948,22920,24990,
#Partially deleted in new
chr2	119611660	119625802	chr2:119611660-119625802	0	+	119611660	119625756	789624	3	82,99,220,	0,3950,13922,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	119615623	119662251	chr2:119615623-119662251	0	+	119615623	119656470	789624	12	86,106,134,81,108,135,159,92,93,96,122,2082,	0,9959,12029,14251,14946,15143,22635,24157,31334,36350,40738,44546,
#Partially deleted in new
chr2	119629941	119639872	chr2:119629941-119639872	0	+	119629941	119638138	789624	5	14,108,135,91,92,	0,628,825,8188,9839,
#Partially deleted in new
chr2	119638361	119648651	chr2:119638361-119648651	0	+	119638361	119648491	789624	4	56,92,93,209,	0,1419,8596,10081,
#Deleted in new
chr2	119655964	119656660	chr2:119655964-119656660	0	+	119655964	119655964	8553170	2	246,299,	0,397,
#Partially deleted in new
chr2	119679166	119682118	chr2:119679166-119682118	1	+	119680853	119681789	789624	2	59,1287,	0,1665,
#Partially deleted in new
chr2	119679166	119682118	chr2:119679166-119682118	3	+	119680853	119681789	789624	2	451,1287,	0,1665,
#Partially deleted in new
chr2	119679169	119682118	chr2:119679169-119682118	1	+	119680853	119681789	789624	2	107,1287,	0,1662,
#Partially deleted in new
chr2	119679190	119681195	chr2:119679190-119681195	0	+	119680853	119681195	789624	2	427,364,	0,1641,
#Partially deleted in new
chr2	119679202	119686507	chr2:119679202-119686507	1	+	119680853	119685714	789624	3	74,292,850,	0,1629,6455,
#Partially deleted in new
chr2	119679202	119686464	chr2:119679202-119686464	0	+	119679202	119679202	8553170	2	74,807,	0,6455,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	119698622	119700151	chr2:119698622-119700151	7	+	119698622	119698622	16724991	3	100,69,373,	0,410,1156,
#Partially deleted in new
chr2	119759630	119983818	chr2:119759630-119983818	3	+	119809853	119977070	0	27	754,155,108,43,79,45,53,121,88,89,64,173,69,126,159,160,84,57,157,167,91,62,147,129,149,136,6835,	0,50206,102905,117692,117833,122155,122466,122872,126164,141087,155548,160438,166967,172793,175169,185450,186710,186887,192342,195526,197213,197385,201176,202985,205866,208206,217353,
#Partially deleted in new
chr2	119759953	119809884	chr2:119759953-119809884	0	+	119759953	119759953	8553170	3	431,144,48,	0,11523,49883,
#Partially deleted in new
chr2	119760219	119880117	chr2:119760219-119880117	0	+	119760219	119760219	8553170	6	165,155,108,43,79,27,	0,49617,102316,117103,117244,119871,
#Partially deleted in new
chr2	119760223	119882146	chr2:119760223-119882146	0	+	119809853	119882146	789624	7	161,155,108,43,100,45,50,	0,49613,102312,117099,117219,121562,121873,
#Partially deleted in new
chr2	119760274	119882579	chr2:119760274-119882579	0	+	119760274	119760274	8553170	7	110,155,108,43,79,18,77,	0,49562,102261,117048,117189,121857,122228,
#Partially deleted in new
chr2	119877322	119934960	chr2:119877322-119934960	0	+	119877322	119900742	789624	10	43,79,45,53,121,89,64,173,126,161,	0,141,4463,4774,5180,23395,37856,42746,55101,57477,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr2	119882502	119977461	chr2:119882502-119977461	0	+	119882502	119915287	789624	20	121,88,89,1512,173,69,126,159,160,84,57,157,167,91,62,147,129,149,136,478,	0,3292,18215,32676,37566,44095,49921,52297,62578,63838,64015,69470,72654,74341,74513,78304,80113,82994,85334,94481,
#Partially deleted in new
chr2	119932279	119935104	chr2:119932279-119935104	0	+	119932279	119932279	8553170	2	270,305,	0,2520,
#Partially deleted in new
chr2	119932475	119946670	chr2:119932475-119946670	0	+	119932475	119946634	789624	5	74,159,160,84,153,	0,2324,12605,13865,14042,
#Partially deleted in new
chr2	119960791	119967872	chr2:119960791-119967872	0	+	119960791	119960791	8553170	4	162,129,149,36,	0,1824,4705,7045,
#Partially deleted in new
chr2	119960823	119977083	chr2:119960823-119977083	0	+	119960823	119977070	789624	5	130,129,149,136,127,	0,1792,4673,7013,16133,
#Partially deleted in new
chr2	119993198	119993611	chr2:119993198-119993611	7	-	119993198	119993198	16724991	1	413,	0,
#Partially deleted in new
chr2	120013004	120179119	chr2:120013004-120179119	1	+	120019084	120174907	789624	25	206,188,105,43,79,45,53,121,88,89,70,170,107,28,43,116,164,98,129,65,94,75,42,131,4279,	0,6072,29001,60173,61095,62471,62696,63966,64224,65488,74166,77342,78550,80244,87239,87694,114683,118613,129998,133220,147876,151831,154461,154872,161836,
#Partially deleted in new
chr2	120013076	120175861	chr2:120013076-120175861	1	+	120019084	120174900	789624	24	134,188,105,43,79,45,53,121,88,89,70,170,107,28,43,116,164,98,129,65,94,75,42,1021,	0,6000,28929,60101,61023,62399,62624,63894,64152,65416,74094,77270,78478,80172,87167,87622,114611,118541,129926,133148,147804,151759,154389,161764,
#Partially deleted in new
chr2	120013118	120104399	chr2:120013118-120104399	1	+	120019084	120104240	789624	17	92,188,105,43,79,45,53,121,88,89,70,170,107,28,43,116,340,	0,5958,28887,60059,60981,62357,62582,63852,64110,65374,74052,77228,78436,80130,87125,87580,90941,
#Partially deleted in new
chr2	120013210	120105115	chr2:120013210-120105115	3	+	120019084	120104240	789624	17	471,188,105,43,79,45,53,121,88,89,70,170,107,28,43,116,1056,	0,5866,28795,59967,60889,62265,62490,63760,64018,65282,73960,77136,78344,80038,87033,87488,90849,
#Partially deleted in new
chr2	120019084	120179118	chr2:120019084-120179118	1	+	120019084	120174907	789624	24	180,105,43,79,45,53,121,88,89,70,170,107,28,43,116,164,98,129,65,94,75,42,128,4278,	0,22921,54093,55015,56391,56616,57886,58144,59408,68086,71262,72470,74164,81159,81614,108603,112533,123918,127140,141796,145751,148381,148795,155756,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	120019147	120074400	chr2:120019147-120074400	0	+	120019147	120019147	8553170	4	117,105,43,301,	0,22858,54030,54952,
#Partially deleted in new
chr2	120090482	120101627	chr2:120090482-120101627	0	+	120090482	120090482	8553170	6	34,107,28,43,116,39,	0,1072,2766,9761,10216,11106,
#Partially deleted in new
chr2	120091631	120128092	chr2:120091631-120128092	0	+	120091631	120091631	8553170	5	30,28,43,116,405,	0,1617,8612,9067,36056,
#Deleted in new
chr2	120100709	120108473	chr2:120100709-120108473	0	+	120100709	120100709	8553170	3	105,29,310,	0,3350,7454,
#Partially deleted in new
chr2	120160566	120167960	chr2:120160566-120167960	0	+	120160566	120160566	8553170	4	408,75,42,84,	0,4269,6899,7310,
#Partially deleted in new
chr2	120174884	120216544	chr2:120174884-120216544	3	-	120174884	120174884	8553170	3	213,157,205,	0,816,41455,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	120192244	120192357	chr2:120192244-120192357	3	+	120192244	120192244	8553170	1	113,	0,
#Deleted in new
chr2	120211053	120211715	chr2:120211053-120211715	7	+	120211053	120211053	16724991	1	662,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	120211726	120212862	chr2:120211726-120212862	7	+	120211726	120211726	16724991	2	564,207,	0,929,
#Deleted in new
chr2	120212934	120213275	chr2:120212934-120213275	7	+	120212934	120212934	16724991	1	341,	0,
#Deleted in new
chr2	120213343	120213631	chr2:120213343-120213631	7	+	120213343	120213343	16724991	1	288,	0,
#Deleted in new
chr2	120213630	120214989	chr2:120213630-120214989	7	+	120213630	120213630	16724991	1	1359,	0,
#Partially deleted in new
chr2	120215180	120217279	chr2:120215180-120217279	7	+	120215180	120215180	16724991	3	415,450,729,	0,719,1370,
#Deleted in new
chr2	120221277	120223408	chr2:120221277-120223408	3	-	120221923	120222976	789624	1	2131,	0,
#Partially deleted in new
chr2	120240063	120289705	chr2:120240063-120289705	0	+	120240106	120289705	789624	4	62,161,209,126,	0,38554,45810,49516,
#Partially deleted in new
chr2	120252757	120294713	chr2:120252757-120294713	3	+	120278664	120293260	0	5	223,161,209,178,1573,	0,25860,33116,36822,40383,
#Partially deleted in new
chr2	120252804	120293665	chr2:120252804-120293665	1	+	120278664	120293260	0	5	176,164,209,178,525,	0,25810,33069,36775,40336,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	120252849	120293155	chr2:120252849-120293155	0	+	120278664	120280861	789624	6	131,161,73,209,178,15,	0,25768,27985,33024,36730,40291,
#Partially deleted in new
chr2	120252857	120280861	chr2:120252857-120280861	1	+	120278664	120280861	789624	3	123,161,27,	0,25760,27977,
#Partially deleted in new
chr2	120252874	120294676	chr2:120252874-120294676	0	+	120252874	120252874	8553170	5	106,95,16,178,1536,	0,25743,33192,36705,40266,
#Partially deleted in new
chr2	120253298	120289757	chr2:120253298-120289757	0	+	120278664	120289757	789624	4	433,161,209,178,	0,25319,32575,36281,
#Partially deleted in new
chr2	120253450	120289592	chr2:120253450-120289592	0	+	120278664	120289592	789624	4	281,164,209,13,	0,25164,32423,36129,
#Deleted in new
chr2	120346142	120351808	chr2:120346142-120351808	3	+	120346188	120349874	789624	2	494,2710,	0,2956,
#Deleted in new
chr2	120464334	120466218	chr2:120464334-120466218	3	-	120464334	120464334	789624	1	1884,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	120542908	120544326	chr2:120542908-120544326	3	-	120542908	120542908	8553170	2	418,110,	0,1308,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	120553742	120558109	chr2:120553742-120558109	3	-	120553742	120553742	8553170	3	327,121,75,	0,734,4292,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	120651272	120651374	chr2:120651272-120651374	3	+	120651272	120651272	8553170	1	102,	0,
#Partially deleted in new
chr2	120686634	120710465	chr2:120686634-120710465	0	-	120686634	120686634	8553170	2	122,202,	0,23629,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	120709262	120710517	chr2:120709262-120710517	3	-	120709262	120709262	8553170	2	216,254,	0,1001,
#Partially deleted in new
chr2	120735622	120951763	chr2:120735622-120951763	0	+	120735622	120735622	8553170	4	59,178,106,521,	0,61668,191738,215620,
#Partially deleted in new
chr2	120735622	120951466	chr2:120735622-120951466	0	+	120735622	120735622	8553170	4	59,178,106,224,	0,61668,191738,215620,
#Partially deleted in new
chr2	120736246	120927458	chr2:120736246-120927458	0	+	120797320	120927458	789624	3	39,178,98,	0,61044,191114,
#Partially deleted in new
chr2	120792282	120991380	chr2:120792282-120991380	0	+	120797320	120970448	789624	10	156,178,214,123,135,150,165,273,337,3173,	0,5008,178110,179658,182692,186151,190433,192188,193995,195925,
#Partially deleted in new
chr2	120792282	120991380	chr2:120792282-120991380	0	+	120797320	120970448	789624	11	156,178,214,123,186,150,165,273,337,1151,791,	0,5008,178110,179658,182641,186151,190433,192188,193995,195925,198307,
#Partially deleted in new
chr2	120792282	120991380	chr2:120792282-120991380	0	+	120797320	120970448	789624	10	156,178,214,123,186,150,165,273,337,3173,	0,5008,178110,179658,182641,186151,190433,192188,193995,195925,
#Partially deleted in new
chr2	120792282	120991380	chr2:120792282-120991380	0	+	120797320	120970448	789624	11	156,178,214,123,135,150,165,273,337,1151,791,	0,5008,178110,179658,182692,186151,190433,192188,193995,195925,198307,
#Partially deleted in new
chr2	120792408	120992653	chr2:120792408-120992653	3	+	120797320	120990675	789624	14	30,178,106,203,186,202,214,123,186,150,165,273,337,4446,	0,4882,134952,158834,162836,176305,177984,179532,182515,186025,190307,192062,193869,195799,
#Partially deleted in new
chr2	120797290	120992652	chr2:120797290-120992652	1	+	120797320	120990675	789624	13	178,106,203,186,202,214,123,186,150,165,273,337,4445,	0,130070,153952,157954,171423,173102,174650,177633,181143,185425,187180,188987,190917,
#Partially deleted in new
chr2	120797290	120988485	chr2:120797290-120988485	0	+	120797320	120970448	789624	9	178,214,123,186,150,165,273,337,278,	0,173102,174650,177633,181143,185425,187180,188987,190917,
#Partially deleted in new
chr2	120797295	120986435	chr2:120797295-120986435	0	+	120797295	120797295	8553170	12	173,106,203,186,202,214,123,135,150,165,273,158,	0,130065,153947,157949,171418,173097,174645,177679,181138,185420,187175,188982,
#Partially deleted in new
chr2	120797344	120970489	chr2:120797344-120970489	0	+	120797344	120970489	789624	4	124,106,202,97,	0,130016,171369,173048,
#Partially deleted in new
chr2	120797344	120975034	chr2:120797344-120975034	0	+	120797344	120951289	789624	7	124,203,186,202,214,123,60,	0,153898,157900,171369,173048,174596,177630,
#Deleted in new
chr2	120866377	120867403	chr2:120866377-120867403	3	-	120866377	120866377	8553170	2	414,294,	0,732,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	121040609	121040710	chr2:121040609-121040710	3	-	121040609	121040609	8553170	1	101,	0,
#Partially deleted in new
chr2	121081436	121088726	chr2:121081436-121088726	3	-	121081436	121081436	8553170	2	606,206,	0,7084,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	121178326	121182580	chr2:121178326-121182580	3	+	121178326	121178326	8553170	2	61,483,	0,3771,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	121216586	121285207	chr2:121216586-121285207	3	-	121224340	121285109	789624	15	7801,52,143,104,91,94,49,92,111,153,107,106,77,152,160,	0,8975,15239,17504,18634,21036,21215,22971,25772,30231,31577,32395,32984,64533,68461,
#Partially deleted in new
chr2	121224163	121234274	chr2:121224163-121234274	0	-	121224163	121224163	8553170	4	224,52,143,184,	0,1398,7662,9927,
#Deleted in new
chr2	121309994	121310412	chr2:121309994-121310412	7	+	121309994	121309994	16724991	1	418,	0,
#Partially deleted in new
chr2	121337775	121649476	chr2:121337775-121649476	3	-	121340860	121605895	0	40	3172,117,207,129,191,244,151,117,107,144,144,79,164,3,64,245,104,108,168,27,105,171,50,168,78,60,71,136,146,93,74,153,68,98,76,92,104,79,480,105,	0,9262,10736,25396,27318,29812,39723,44432,49346,49987,59364,60546,63733,64092,66595,69695,73090,80846,87363,89628,92297,109561,110500,111177,113137,114014,119911,121064,122204,123325,124756,132032,165391,177889,188069,190023,190901,192471,267925,311596,
#Partially deleted in new
chr2	121337775	121649476	chr2:121337775-121649476	1	-	121340860	121605895	0	40	3172,117,207,129,191,244,151,107,144,144,79,164,3,64,245,24,104,168,27,105,24,171,50,168,78,60,71,136,146,93,74,153,68,98,76,92,104,79,480,105,	0,9262,10736,25396,27318,29812,39723,49346,49987,59364,60546,63733,64092,66595,69695,71248,73090,87363,89628,92297,107163,109561,110500,111177,113137,114014,119911,121064,122204,123325,124756,132032,165391,177889,188069,190023,190901,192471,267925,311596,
#Partially deleted in new
chr2	121337775	121649587	chr2:121337775-121649587	1	-	121340860	121605895	0	39	3172,117,207,129,191,244,151,107,144,144,79,164,3,64,245,24,104,168,27,105,171,50,168,78,60,71,136,146,93,74,153,68,98,76,92,104,79,480,216,	0,9262,10736,25396,27318,29812,39723,49346,49987,59364,60546,63733,64092,66595,69695,71248,73090,87363,89628,92297,109561,110500,111177,113137,114014,119911,121064,122204,123325,124756,132032,165391,177889,188069,190023,190901,192471,267925,311596,
#Partially deleted in new
chr2	121337775	121649476	chr2:121337775-121649476	1	-	121340860	121605895	0	39	3172,117,207,129,191,244,151,107,144,144,79,164,3,64,242,24,104,168,105,48,171,50,168,78,60,71,136,146,93,74,153,68,98,76,92,104,79,480,105,	0,9262,10736,25396,27318,29812,39723,49346,49987,59364,60546,63733,64092,66595,69695,71248,73090,87363,92297,107673,109561,110500,111177,113137,114014,119911,121064,122204,123325,124756,132032,165391,177889,188069,190023,190901,192471,267925,311596,
#Partially deleted in new
chr2	121337775	121606060	chr2:121337775-121606060	1	-	121340860	121605895	0	39	3172,117,207,129,191,244,151,117,107,144,144,79,164,3,64,245,104,108,168,27,105,171,50,168,78,60,71,136,146,93,74,153,68,98,76,92,104,79,360,	0,9262,10736,25396,27318,29812,39723,44432,49346,49987,59364,60546,63733,64092,66595,69695,73090,80846,87363,89628,92297,109561,110500,111177,113137,114014,119911,121064,122204,123325,124756,132032,165391,177889,188069,190023,190901,192471,267925,
#Partially deleted in new
chr2	121339989	121649438	chr2:121339989-121649438	1	-	121340860	121605895	789624	39	958,117,207,129,191,244,151,107,144,144,79,164,64,245,24,104,168,27,105,24,171,50,168,78,60,71,136,146,93,74,153,68,98,76,92,104,79,480,67,	0,7048,8522,23182,25104,27598,37509,47132,47773,57150,58332,61519,64381,67481,69034,70876,85149,87414,90083,104949,107347,108286,108963,110923,111800,117697,118850,119990,121111,122542,129818,163177,175675,185855,187809,188687,190257,265711,309382,
#Partially deleted in new
chr2	121340721	121503220	chr2:121340721-121503220	0	-	121340860	121503220	789624	33	226,117,207,129,191,244,151,107,144,144,79,164,3,69,64,245,24,104,168,27,105,171,50,168,78,60,71,136,146,93,74,153,54,	0,6316,7790,22450,24372,26866,36777,46400,47041,56418,57600,60787,61146,61873,63649,66749,68302,70144,84417,86682,89351,106615,107554,108231,110191,111068,116965,118118,119258,120379,121810,129086,162445,
#Partially deleted in new
chr2	121364118	121388076	chr2:121364118-121388076	0	-	121364118	121364118	8553170	5	1166,244,151,107,314,	0,3469,13380,23003,23644,
#Partially deleted in new
chr2	121407518	121427470	chr2:121407518-121427470	0	-	121407518	121407518	8553170	4	197,104,168,67,	0,3347,17620,19885,
#Partially deleted in new
chr2	121458915	121490328	chr2:121458915-121490328	0	-	121458915	121458915	8553170	6	60,146,93,74,153,56,	0,1064,2185,3616,10892,31357,
#Deleted in new
chr2	121459621	121461195	chr2:121459621-121461195	0	-	121459621	121459621	8553170	2	504,95,	0,1479,
#Partially deleted in new
chr2	121460014	121505093	chr2:121460014-121505093	0	-	121460014	121503185	789624	6	111,93,74,153,68,164,	0,1086,2517,9793,43152,44915,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	121461108	121503988	chr2:121461108-121503988	0	-	121461108	121503185	789624	5	85,74,153,68,175,	0,1423,8699,42058,42705,
#Partially deleted in new
chr2	121462531	121525967	chr2:121462531-121525967	0	-	121462531	121462531	8553170	5	74,153,68,98,123,	0,7276,40635,53133,63313,
#Partially deleted in new
chr2	121462534	121513073	chr2:121462534-121513073	0	-	121462534	121462534	8553170	5	71,153,68,186,91,	0,7273,40632,42640,50448,
#Partially deleted in new
chr2	121515664	121530745	chr2:121515664-121530745	0	-	121515664	121515664	8553170	5	98,76,92,104,499,	0,10180,12134,13012,14582,
#Partially deleted in new
chr2	121530421	121532705	chr2:121530421-121532705	3	+	121530421	121530421	8553170	2	354,328,	0,1956,
#Deleted in new
chr2	121530880	121531007	chr2:121530880-121531007	3	+	121530880	121530880	789624	1	127,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	121603072	121603164	chr2:121603072-121603164	3	-	121603072	121603072	8553170	1	92,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	121649649	121651535	chr2:121649649-121651535	1	+	121649649	121649649	789624	3	262,81,1068,	0,651,818,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	121649797	121651535	chr2:121649797-121651535	0	+	121649797	121649797	8553170	2	114,1068,	0,670,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	121649982	121651538	chr2:121649982-121651538	0	+	121649982	121649982	789624	3	121,81,1071,	0,318,485,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	121650081	121651535	chr2:121650081-121651535	0	+	121650081	121650081	8553170	2	300,1068,	0,386,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	121650099	121728481	chr2:121650099-121728481	3	+	121650099	121650099	789624	4	282,215,140,679,	0,368,55668,77703,
#Deleted in new
chr2	121658474	121658973	chr2:121658474-121658973	7	-	121658474	121658474	16724991	1	499,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	121688202	121689714	chr2:121688202-121689714	3	+	121688202	121688202	8553170	1	1512,	0,
#Deleted in new
chr2	121708511	121709115	chr2:121708511-121709115	7	-	121708511	121708511	16724991	1	604,	0,
#Partially deleted in new
chr2	121726944	121736923	chr2:121726944-121736923	3	-	121727723	121736850	0	7	968,69,60,212,109,138,178,	0,1343,1532,3948,5151,8668,9801,
#Partially deleted in new
chr2	121727346	121730943	chr2:121727346-121730943	0	-	121727723	121730943	789624	3	566,69,51,	0,941,3546,
#Partially deleted in new
chr2	121727675	121731189	chr2:121727675-121731189	0	-	121727675	121727675	8553170	4	237,69,60,297,	0,612,801,3217,
#Deleted in new
chr2	121727730	121728599	chr2:121727730-121728599	0	-	121727730	121727730	8553170	3	182,69,123,	0,557,746,
#Partially deleted in new
chr2	121727796	121735805	chr2:121727796-121735805	0	-	121727796	121732132	789624	6	116,69,60,212,109,193,	0,491,680,3096,4299,7816,
#Partially deleted in new
chr2	121728506	121736911	chr2:121728506-121736911	0	-	121728506	121736850	789624	5	30,212,109,42,166,	0,2386,3589,7106,8239,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	121730382	121736872	chr2:121730382-121736872	0	-	121730382	121730382	8553170	4	722,109,138,127,	0,1713,5230,6363,
#Partially deleted in new
chr2	121737102	121765218	chr2:121737102-121765218	0	+	121737102	121765218	789624	6	83,94,97,116,80,85,	0,20137,21607,24306,25902,28031,
#Partially deleted in new
chr2	121743478	121745921	chr2:121743478-121745921	7	-	121743478	121743478	16724991	2	165,39,	0,2404,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	121755532	121767853	chr2:121755532-121767853	3	+	121755779	121765367	0	6	313,94,97,116,80,2720,	0,1707,3177,5876,7472,9601,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	121755544	121767853	chr2:121755544-121767853	1	+	121755779	121765207	0	5	301,94,97,116,2720,	0,1695,3165,5864,9589,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	121755658	121767294	chr2:121755658-121767294	0	+	121755779	121755890	789624	6	295,94,97,116,80,2161,	0,1581,3051,5750,7346,9475,
#Partially deleted in new
chr2	121755659	121765221	chr2:121755659-121765221	0	+	121755779	121755890	789624	4	294,116,80,88,	0,5749,7345,9474,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	121755659	121757608	chr2:121755659-121757608	0	+	121755659	121755659	8553170	2	186,369,	0,1580,
#Partially deleted in new
chr2	121755659	121763057	chr2:121755659-121763057	0	+	121755779	121755890	789624	4	294,97,116,53,	0,3050,5749,7345,
#Partially deleted in new
chr2	121755659	121765985	chr2:121755659-121765985	0	+	121755659	121755659	8553170	3	186,80,852,	0,7345,9474,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	121755662	121767179	chr2:121755662-121767179	0	+	121755779	121758727	789624	6	183,195,97,116,80,2046,	0,1577,3047,5746,7342,9471,
#Partially deleted in new
chr2	121755684	121765284	chr2:121755684-121765284	0	+	121755684	121755684	8553170	5	161,97,116,80,151,	0,3025,5724,7320,9449,
#Partially deleted in new
chr2	121755702	121757409	chr2:121755702-121757409	0	+	121755702	121755702	8553170	2	251,170,	0,1537,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	121756170	121765661	chr2:121756170-121765661	1	+	121756640	121765367	789624	6	521,94,97,116,80,528,	0,1069,2539,5238,6834,8963,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	121790443	121796702	chr2:121790443-121796702	3	+	121790443	121790443	8553170	4	60,47,225,462,	0,2745,4054,5797,
#Partially deleted in new
chr2	121790459	121795040	chr2:121790459-121795040	0	+	121790459	121790459	8553170	3	60,47,543,	0,2729,4038,
#Partially deleted in new
chr2	121790464	121796356	chr2:121790464-121796356	1	+	121790464	121790464	8553170	5	55,323,47,225,116,	0,666,2724,4033,5776,
#Partially deleted in new
chr2	121790491	121794919	chr2:121790491-121794919	0	+	121790491	121790491	8553170	4	28,47,225,50,	0,2697,4006,4378,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	123065320	123067722	chr2:123065320-123067722	3	+	123065320	123065320	8553170	2	149,652,	0,1750,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	123066150	123073481	chr2:123066150-123073481	3	-	123066150	123066150	789624	3	56,198,330,	0,4016,7001,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	123443265	123444445	chr2:123443265-123444445	3	-	123443265	123443265	8553170	2	215,54,	0,1126,
#Partially deleted in new
chr2	123695301	123697396	chr2:123695301-123697396	7	+	123695301	123695301	16724991	1	2095,	0,
#Partially deleted in new
chr2	123762170	123763071	chr2:123762170-123763071	7	+	123762170	123762170	16724991	1	901,	0,
#Partially deleted in new
chr2	123850521	123850695	chr2:123850521-123850695	3	-	123850521	123850521	8553170	1	174,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	123869255	123869570	chr2:123869255-123869570	3	-	123869255	123869255	8553170	1	315,	0,
#Partially deleted in new
chr2	124016857	124025173	chr2:124016857-124025173	3	-	124016857	124016857	8553170	2	43,499,	0,7817,
#Partially deleted in new
chr2	124025286	124135181	chr2:124025286-124135181	0	+	124025286	124025286	8553170	2	446,114,	0,109781,
#Partially deleted in new
chr2	124025286	124915287	chr2:124025286-124915287	3	+	124025650	124914288	789624	24	446,105,194,148,204,185,141,265,150,172,107,120,201,157,128,171,219,240,225,131,88,219,72,1196,	0,196418,216913,392156,409197,421466,449452,479005,499016,501998,537930,584514,622471,721942,738385,738690,747512,764615,772809,840019,844388,877595,886180,888805,
#Partially deleted in new
chr2	124221704	124242441	chr2:124221704-124242441	0	+	124221704	124221704	8553170	2	105,242,	0,20495,
#Deleted in new
chr2	124680721	124680916	chr2:124680721-124680916	7	-	124680721	124680721	16724991	1	195,	0,
#Deleted in new
chr2	124778453	124778640	chr2:124778453-124778640	7	-	124778453	124778453	16724991	1	187,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	124932914	124933020	chr2:124932914-124933020	7	+	124932914	124932914	16724991	1	106,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	125710968	125765842	chr2:125710968-125765842	3	+	125710968	125710968	8553170	2	402,266,	0,54608,
#Deleted in new
chr2	125823107	125823315	chr2:125823107-125823315	7	+	125823107	125823107	16724991	1	208,	0,
#Partially deleted in new
chr2	126110098	126117985	chr2:126110098-126117985	3	-	126110098	126110098	789624	4	212,238,111,63,	0,2834,3918,7824,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	126308509	126343992	chr2:126308509-126343992	3	+	126308509	126308509	8553170	3	136,237,231,	0,3791,35252,
#Deleted in new
chr2	126311465	126311927	chr2:126311465-126311927	7	-	126311465	126311465	16724991	1	462,	0,
#Partially deleted in new
chr2	126312413	126329132	chr2:126312413-126329132	1	+	126312413	126312413	8553170	2	124,316,	0,16403,
#Deleted in new
chr2	126557434	126558162	chr2:126557434-126558162	7	-	126557434	126557434	16724991	1	728,	0,
#Partially deleted in new
chr2	126655932	126696670	chr2:126655932-126696670	3	+	126656263	126696142	0	4	380,57,84,725,	0,34322,37931,40013,
#Deleted in new
chr2	126656132	126658767	chr2:126656132-126658767	0	+	126656132	126656132	8553170	2	180,1161,	0,1474,
#Partially deleted in new
chr2	126656141	126678887	chr2:126656141-126678887	0	+	126656141	126656141	8553170	2	171,587,	0,22159,
#Partially deleted in new
chr2	126656183	126696664	chr2:126656183-126696664	1	+	126656263	126696142	0	3	129,84,719,	0,37680,39762,
#Partially deleted in new
chr2	126656188	126696667	chr2:126656188-126696667	1	+	126690268	126696142	0	5	124,818,57,84,722,	0,29639,34066,37675,39757,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	126679621	126680420	chr2:126679621-126680420	7	+	126679621	126679621	16724991	1	799,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	126702838	126702942	chr2:126702838-126702942	3	-	126702838	126702838	8553170	1	104,	0,
#Partially deleted in new
chr2	126898863	126901507	chr2:126898863-126901507	1	+	126898918	126901437	789624	7	254,75,90,18,84,73,143,	0,353,659,972,1072,2346,2501,
#Partially deleted in new
chr2	126898881	126901531	chr2:126898881-126901531	0	+	126898881	126898881	8553170	4	206,75,90,322,	0,335,641,2328,
#Deleted in new
chr2	126898891	126900039	chr2:126898891-126900039	0	+	126898891	126898891	8553170	3	196,75,517,	0,325,631,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	126898895	126902095	chr2:126898895-126902095	1	+	126898918	126901904	789624	7	222,75,90,84,73,40,227,	0,321,627,1040,2314,2469,2973,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	126898907	126902097	chr2:126898907-126902097	0	+	126898918	126899845	789624	7	156,75,90,55,69,40,229,	0,309,615,891,2302,2457,2961,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	126898914	126902097	chr2:126898914-126902097	3	+	126898918	126901402	789624	7	149,75,90,84,69,40,229,	0,302,608,1021,2295,2450,2954,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	126898914	126902095	chr2:126898914-126902095	1	+	126898918	126901402	789624	7	149,75,90,84,69,40,224,	0,302,608,1021,2295,2450,2957,
#Deleted in new
chr2	126898933	126899427	chr2:126898933-126899427	0	+	126898933	126899427	789624	2	184,211,	0,283,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	126899218	126902097	chr2:126899218-126902097	0	+	126899218	126902017	789624	5	73,90,18,69,229,	0,304,617,1991,2650,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	126899522	126902097	chr2:126899522-126902097	0	+	126899522	126901959	789624	3	90,73,229,	0,1687,2346,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	126900011	126902097	chr2:126900011-126902097	0	+	126900011	126901904	789624	4	8,73,40,229,	0,1198,1353,1857,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	127017420	127017482	chr2:127017420-127017482	3	+	127017420	127017420	8553170	1	62,	0,
#Deleted in new
chr2	127024251	127025723	chr2:127024251-127025723	3	-	127024251	127024251	8553170	1	1472,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	127025210	127029686	chr2:127025210-127029686	3	+	127025210	127025210	8553170	1	4476,	0,
#Partially deleted in new
chr2	127048026	127107288	chr2:127048026-127107288	1	-	127048525	127106943	0	16	607,102,111,90,129,145,45,83,76,86,108,96,95,55,81,429,	0,2394,2775,3127,9446,10984,12569,14088,15544,15906,20897,21968,22526,22735,28599,58833,
#Partially deleted in new
chr2	127048026	127107355	chr2:127048026-127107355	1	-	127048525	127106943	0	19	607,102,111,90,108,24,108,129,145,83,76,86,93,108,96,95,55,81,496,	0,2394,2775,3127,4228,5395,5878,9446,10984,14088,15544,15906,20136,20897,21968,22526,22735,28599,58833,
#Partially deleted in new
chr2	127048026	127107288	chr2:127048026-127107288	1	-	127048525	127106943	0	16	607,102,111,90,108,129,145,83,76,86,108,96,95,55,81,429,	0,2394,2775,3127,4228,9446,10984,14088,15544,15906,20897,21968,22526,22735,28599,58833,
#Partially deleted in new
chr2	127048026	127107288	chr2:127048026-127107288	3	-	127048525	127106943	0	13	607,102,111,145,83,76,86,108,96,95,55,81,429,	0,2394,2775,10984,14088,15544,15906,20897,21968,22526,22735,28599,58833,
#Partially deleted in new
chr2	127048026	127107288	chr2:127048026-127107288	1	-	127048525	127106943	0	16	607,102,111,90,108,145,83,76,86,93,108,96,95,55,81,429,	0,2394,2775,3127,4228,10984,14088,15544,15906,20136,20897,21968,22526,22735,28599,58833,
#Partially deleted in new
chr2	127048026	127107288	chr2:127048026-127107288	1	-	127048525	127106943	0	15	607,102,111,90,145,45,83,76,86,108,96,95,55,81,429,	0,2394,2775,3127,10984,12569,14088,15544,15906,20897,21968,22526,22735,28599,58833,
#Partially deleted in new
chr2	127048026	127107288	chr2:127048026-127107288	1	-	127048525	127106943	0	18	607,102,111,90,108,24,108,145,83,76,86,93,108,96,95,55,81,429,	0,2394,2775,3127,4228,5395,5878,10984,14088,15544,15906,20136,20897,21968,22526,22735,28599,58833,
#Partially deleted in new
chr2	127048026	127107001	chr2:127048026-127107001	1	-	127048525	127106943	0	14	607,102,111,145,45,83,76,86,108,96,95,55,81,142,	0,2394,2775,10984,12569,14088,15544,15906,20897,21968,22526,22735,28599,58833,
#Partially deleted in new
chr2	127048026	127107288	chr2:127048026-127107288	1	-	127048525	127106943	0	15	607,102,111,90,129,145,83,76,86,108,96,95,55,81,429,	0,2394,2775,3127,9446,10984,14088,15544,15906,20897,21968,22526,22735,28599,58833,
#Partially deleted in new
chr2	127048026	127107288	chr2:127048026-127107288	1	-	127048525	127106943	0	15	607,102,111,90,108,145,83,76,86,108,96,95,55,81,429,	0,2394,2775,3127,4228,10984,14088,15544,15906,20897,21968,22526,22735,28599,58833,
#Deleted in new
chr2	127048032	127056491	chr2:127048032-127056491	0	-	127048032	127048032	8553170	5	601,102,111,90,4237,	0,2388,2769,3121,4222,
#Partially deleted in new
chr2	127048037	127107278	chr2:127048037-127107278	1	-	127048525	127106943	0	14	596,102,111,90,145,83,76,86,108,96,95,55,81,419,	0,2383,2764,3116,10973,14077,15533,15895,20886,21957,22515,22724,28588,58822,
#Partially deleted in new
chr2	127050381	127064928	chr2:127050381-127064928	0	-	127050381	127050381	8553170	8	141,111,90,145,83,76,86,155,	0,420,772,8629,11733,13189,13551,14392,
#Partially deleted in new
chr2	127050407	127064810	chr2:127050407-127064810	0	-	127050407	127050407	8553170	9	115,111,90,129,145,83,76,86,37,	0,394,746,7065,8603,11707,13163,13525,14366,
#Deleted in new
chr2	127170010	127170231	chr2:127170010-127170231	7	+	127170010	127170010	16724991	1	221,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	127184119	127205767	chr2:127184119-127205767	1	-	127187270	127203549	789624	8	3268,204,79,167,164,210,200,109,	0,8974,9669,11215,15256,17002,19252,21539,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	127186409	127220078	chr2:127186409-127220078	3	-	127187270	127203549	789624	8	978,204,79,167,164,210,200,90,	0,6684,7379,8925,12966,14712,16962,33579,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	127247257	127250082	chr2:127247257-127250082	7	+	127247257	127247257	16724991	1	2825,	0,
#Partially deleted in new
chr2	127257289	127294176	chr2:127257289-127294176	3	-	127257595	127294081	0	15	438,153,119,118,97,203,185,315,205,165,136,50,237,206,123,	0,2006,3938,14046,15575,21883,23157,29413,31370,32047,32399,32934,35320,36223,36764,
#Partially deleted in new
chr2	127257289	127294145	chr2:127257289-127294145	0	-	127293865	127294081	789624	15	438,153,119,118,97,203,185,315,205,165,136,50,237,206,289,	0,2006,3938,14046,15575,21883,23157,29413,31370,32047,32399,32934,35320,36223,36567,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	127257289	127290893	chr2:127257289-127290893	0	-	127257289	127257289	8553170	10	438,153,119,118,97,203,185,315,205,1557,	0,2006,3938,14046,15575,21883,23157,29413,31370,32047,
#Partially deleted in new
chr2	127257295	127294144	chr2:127257295-127294144	1	-	127257595	127294081	789624	16	432,153,119,118,97,203,185,75,315,205,165,136,50,237,206,91,	0,2000,3932,14040,15569,21877,23151,23602,29407,31364,32041,32393,32928,35314,36217,36758,
#Partially deleted in new
chr2	127257296	127294094	chr2:127257296-127294094	0	-	127293865	127294081	789624	15	431,153,119,118,97,203,185,315,205,165,136,50,237,206,300,	0,1999,3931,14039,15568,21876,23150,29406,31363,32040,32392,32927,35313,36216,36498,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	127257296	127262882	chr2:127257296-127262882	0	-	127257296	127257296	8553170	2	431,3587,	0,1999,
#Partially deleted in new
chr2	127257296	127292653	chr2:127257296-127292653	0	-	127257347	127292653	789624	5	306,165,136,50,44,	0,32040,32392,32927,35313,
#Partially deleted in new
chr2	127257302	127294139	chr2:127257302-127294139	0	-	127292594	127294081	789624	15	425,153,119,118,97,203,185,315,205,165,136,50,935,206,86,	0,1993,3925,14033,15562,21870,23144,29400,31357,32034,32386,32921,34609,36210,36751,
#Partially deleted in new
chr2	127257302	127294145	chr2:127257302-127294145	0	-	127289812	127294081	789624	14	425,153,119,118,97,203,185,315,205,165,136,237,206,92,	0,1993,3925,14033,15562,21870,23144,29400,31357,32034,32386,35307,36210,36751,
#Partially deleted in new
chr2	127257318	127293602	chr2:127257318-127293602	0	-	127279352	127293602	789624	13	409,153,119,118,97,203,315,205,165,136,50,237,90,	0,1977,3909,14017,15546,21854,29384,31341,32018,32370,32905,35291,36194,
#Partially deleted in new
chr2	127257319	127294144	chr2:127257319-127294144	0	-	127284284	127294081	789624	16	408,153,119,118,97,203,185,119,315,205,165,136,50,237,206,91,	0,1976,3908,14016,15545,21853,23127,26851,29383,31340,32017,32369,32904,35290,36193,36734,
#Partially deleted in new
chr2	127257474	127294098	chr2:127257474-127294098	0	-	127290233	127294081	789624	15	253,153,119,118,97,203,185,315,205,165,136,50,95,206,45,	0,1821,3753,13861,15390,21698,22972,29228,31185,31862,32214,32749,35135,36038,36579,
#Partially deleted in new
chr2	127260764	127279261	chr2:127260764-127279261	0	-	127260764	127260764	8553170	4	582,118,97,89,	0,10571,12100,18408,
#Partially deleted in new
chr2	127261227	127286797	chr2:127261227-127286797	0	-	127271449	127286797	789624	5	119,118,203,185,95,	0,10108,17945,19219,25475,
#Partially deleted in new
chr2	127286748	127294107	chr2:127286748-127294107	0	-	127286748	127286748	8553170	7	269,205,488,50,95,206,54,	0,1911,2588,3475,5861,6764,7305,
#Deleted in new
chr2	127288672	127290275	chr2:127288672-127290275	0	-	127288672	127290275	789624	4	192,183,136,52,	0,664,1016,1551,
#Deleted in new
chr2	127288693	127289942	chr2:127288693-127289942	0	-	127288693	127288693	8553170	3	171,165,254,	0,643,995,
#Deleted in new
chr2	127289375	127290589	chr2:127289375-127290589	0	-	127289375	127289375	8553170	2	449,366,	0,848,
#Partially deleted in new
chr2	127289484	127294166	chr2:127289484-127294166	0	-	127292594	127294081	789624	6	17,136,50,763,206,113,	0,204,739,2599,4028,4569,
#Partially deleted in new
chr2	127289695	127294137	chr2:127289695-127294137	0	-	127289695	127289695	8553170	4	578,95,206,84,	0,2914,3817,4358,
#Deleted in new
chr2	127292434	127294153	chr2:127292434-127294153	0	-	127292434	127292434	8553170	3	270,206,100,	0,1078,1619,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	127298729	127388465	chr2:127298729-127388465	3	-	127307578	127343129	0	17	9075,178,130,132,149,207,93,68,80,131,88,114,100,41,119,69,218,	0,9855,16024,18899,19439,23316,25172,25444,26998,27957,31191,31662,37140,39008,40202,44396,89518,
#Partially deleted in new
chr2	127307403	127343229	chr2:127307403-127343229	1	-	127307578	127343129	0	16	401,178,130,132,149,207,93,68,80,131,88,114,100,41,119,104,	0,1181,7350,10225,10765,14642,16498,16770,18324,19283,22517,22988,28466,30334,31528,35722,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	127316872	127316979	chr2:127316872-127316979	3	+	127316872	127316872	8553170	1	107,	0,
#Partially deleted in new
chr2	127337758	127387932	chr2:127337758-127387932	0	-	127337758	127343129	789624	4	20,119,69,481,	0,1173,5367,49693,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	127389129	127400580	chr2:127389129-127400580	3	+	127389129	127389129	8553170	2	56,2634,	0,8817,
#Partially deleted in new
chr2	127418426	127429246	chr2:127418426-127429246	3	+	127419942	127428946	0	9	66,91,167,25,138,135,143,118,890,	0,1495,2856,4490,4607,4847,7658,8678,9930,
#Partially deleted in new
chr2	127418426	127423223	chr2:127418426-127423223	0	+	127419942	127421406	789624	5	66,87,132,25,190,	0,1499,2891,4490,4607,
#Partially deleted in new
chr2	127418426	127423097	chr2:127418426-127423097	0	+	127418426	127418426	8553170	4	66,87,167,181,	0,1499,2856,4490,
#Partially deleted in new
chr2	127418427	127423150	chr2:127418427-127423150	0	+	127419942	127423150	789624	5	65,207,167,25,117,	0,1378,2855,4489,4606,
#Partially deleted in new
chr2	127418438	127426131	chr2:127418438-127426131	0	+	127419942	127426131	789624	7	54,91,167,25,138,78,47,	0,1483,2844,4478,4595,4892,7646,
#Deleted in new
chr2	127419692	127423119	chr2:127419692-127423119	0	+	127419942	127423119	789624	4	320,167,25,86,	0,1590,3224,3341,
#Deleted in new
chr2	127419696	127423126	chr2:127419696-127423126	0	+	127419942	127421406	789624	4	316,132,25,93,	0,1621,3220,3337,
#Partially deleted in new
chr2	127419881	127428983	chr2:127419881-127428983	1	+	127419942	127428946	789624	7	131,167,25,375,143,118,627,	0,1401,3035,3152,6203,7223,8475,
#Partially deleted in new
chr2	127423287	127426526	chr2:127423287-127426526	0	+	127423287	127423287	8553170	2	121,442,	0,2797,
#Partially deleted in new
chr2	127423288	127429015	chr2:127423288-127429015	0	+	127423288	127428946	789624	2	120,659,	0,5068,
#Deleted in new
chr2	127423536	127423618	chr2:127423536-127423618	3	-	127423536	127423536	5263520	1	82,	0,
#Partially deleted in new
chr2	127436206	127486618	chr2:127436206-127486618	0	-	127470349	127486618	789624	4	91,149,135,66,	0,33779,34044,50346,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	127455393	127489540	chr2:127455393-127489540	1	+	127455393	127455393	8553170	4	377,200,148,9,	0,772,27434,34138,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	127455417	127489613	chr2:127455417-127489613	0	+	127455417	127455417	8553170	5	136,241,200,148,82,	0,231,748,27410,34114,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	127455451	127489642	chr2:127455451-127489642	0	+	127455451	127455451	8553170	5	438,200,113,148,111,	0,714,12562,27376,34080,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	127455507	127489613	chr2:127455507-127489613	0	+	127455507	127455507	8553170	2	858,82,	0,34024,
#Partially deleted in new
chr2	127463641	127489760	chr2:127463641-127489760	1	+	127463641	127463641	8553170	6	243,176,113,148,98,229,	0,4031,4372,19186,22778,25890,
#Partially deleted in new
chr2	127463644	127489608	chr2:127463644-127489608	0	+	127463644	127463644	8553170	4	240,113,148,77,	0,4369,19183,25887,
#Partially deleted in new
chr2	127463651	127489613	chr2:127463651-127489613	0	+	127463651	127463651	8553170	3	233,113,82,	0,4362,25880,
#Partially deleted in new
chr2	127463672	127489613	chr2:127463672-127489613	0	+	127463672	127463672	8553170	2	212,82,	0,25859,
#Partially deleted in new
chr2	127463731	127489613	chr2:127463731-127489613	0	+	127463731	127463731	8553170	4	153,190,148,82,	0,1109,19096,25800,
#Partially deleted in new
chr2	127463849	127505808	chr2:127463849-127505808	3	+	127463849	127463849	8553170	8	35,176,113,101,148,105,99,228,	0,3823,4164,6505,18978,25682,34882,41731,
#Partially deleted in new
chr2	127467576	127489790	chr2:127467576-127489790	1	+	127467576	127467576	8553170	3	272,113,259,	0,437,21955,
#Partially deleted in new
chr2	127467584	127489613	chr2:127467584-127489613	0	+	127467584	127467584	8553170	5	264,113,101,148,82,	0,429,2770,15243,21947,
#Partially deleted in new
chr2	127467707	127489795	chr2:127467707-127489795	0	+	127467707	127467707	8553170	4	141,113,95,264,	0,306,15173,21824,
#Partially deleted in new
chr2	127467707	127489785	chr2:127467707-127489785	0	+	127467707	127467707	8553170	5	141,113,98,162,254,	0,306,18712,20277,21824,
#Partially deleted in new
chr2	127467707	127470851	chr2:127467707-127470851	0	+	127467707	127467707	8553170	3	141,113,497,	0,306,2647,
#Partially deleted in new
chr2	127467707	127505801	chr2:127467707-127505801	0	+	127467707	127467707	8553170	5	141,113,105,123,221,	0,306,21824,31000,37873,
#Partially deleted in new
chr2	127467707	127484691	chr2:127467707-127484691	0	+	127467707	127467707	8553170	4	141,113,148,219,	0,306,15120,16765,
#Partially deleted in new
chr2	127467725	127514623	chr2:127467725-127514623	0	+	127467725	127467725	8553170	5	123,113,105,99,310,	0,288,21806,31006,46588,
#Partially deleted in new
chr2	127467824	127505752	chr2:127467824-127505752	0	+	127467824	127467824	8553170	6	24,113,101,105,123,172,	0,189,2530,21707,30883,37756,
#Partially deleted in new
chr2	127467824	127492976	chr2:127467824-127492976	0	+	127467824	127467824	8553170	4	24,113,62,221,	0,189,21707,24931,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	127467824	127494706	chr2:127467824-127494706	0	+	127467824	127467824	8553170	4	24,113,62,274,	0,189,21707,26608,
#Partially deleted in new
chr2	127467824	127511418	chr2:127467824-127511418	0	+	127467824	127467824	8553170	5	24,113,105,123,248,	0,189,21707,30883,43346,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	127467824	127501805	chr2:127467824-127501805	0	+	127467824	127467824	8553170	5	24,113,105,123,61,	0,189,21707,30883,33920,
#Partially deleted in new
chr2	127467824	127505742	chr2:127467824-127505742	0	+	127467824	127467824	8553170	7	24,113,148,98,105,99,162,	0,189,15003,18595,21707,30907,37756,
#Partially deleted in new
chr2	127467824	127505808	chr2:127467824-127505808	0	+	127467824	127467824	8553170	6	24,113,148,105,99,228,	0,189,15003,21707,30907,37756,
#Partially deleted in new
chr2	127467827	127492984	chr2:127467827-127492984	0	+	127467827	127467827	8553170	5	21,113,148,62,229,	0,186,15000,21704,24928,
#Partially deleted in new
chr2	127467828	127489787	chr2:127467828-127489787	0	+	127467828	127467828	8553170	5	20,113,148,162,256,	0,185,14999,20156,21703,
#Partially deleted in new
chr2	127467829	127490919	chr2:127467829-127490919	0	+	127467829	127467829	8553170	5	19,113,148,62,104,	0,184,14998,21702,22986,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	127467829	127473170	chr2:127467829-127473170	0	+	127467829	127467829	8553170	3	19,113,181,	0,184,5160,
#Partially deleted in new
chr2	127467832	127489762	chr2:127467832-127489762	0	+	127467832	127467832	8553170	4	16,113,162,231,	0,181,20152,21699,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	127472233	127472415	chr2:127472233-127472415	3	+	127472233	127472233	8553170	1	182,	0,
#Partially deleted in new
chr2	127480805	127526468	chr2:127480805-127526468	3	-	127481043	127526208	789624	14	370,112,57,112,118,130,83,151,98,58,190,1069,116,294,	0,5747,8373,9026,11165,12475,14066,15192,17334,22009,22581,23878,42870,45369,
#Partially deleted in new
chr2	127480809	127493376	chr2:127480809-127493376	0	-	127485904	127493376	789624	7	366,160,112,57,112,118,96,	0,5064,5743,8369,9022,11161,12471,
#Partially deleted in new
chr2	127482253	127489642	chr2:127482253-127489642	0	+	127482253	127482253	8553170	2	722,111,	0,7278,
#Deleted in new
chr2	127502578	127504791	chr2:127502578-127504791	0	-	127502578	127502578	8553170	3	294,190,108,	0,808,2105,
#Partially deleted in new
chr2	127504997	127526466	chr2:127504997-127526466	0	-	127504997	127504997	8553170	2	755,56,	0,21413,
#Partially deleted in new
chr2	127505039	127526886	chr2:127505039-127526886	0	-	127505039	127526684	789624	3	713,116,251,	0,18636,21596,
#Partially deleted in new
chr2	127505190	127526482	chr2:127505190-127526482	0	-	127505190	127505190	8553170	2	562,308,	0,20984,
#Partially deleted in new
chr2	127505241	127526481	chr2:127505241-127526481	0	-	127505241	127505241	8553170	2	511,71,	0,21169,
#Partially deleted in new
chr2	127505306	127514937	chr2:127505306-127514937	0	-	127505306	127505306	8553170	2	446,121,	0,9510,
#Partially deleted in new
chr2	127505349	127526489	chr2:127505349-127526489	0	-	127505349	127505349	8553170	3	403,116,79,	0,18326,21061,
#Partially deleted in new
chr2	127505387	127526489	chr2:127505387-127526489	0	-	127505387	127505387	8553170	3	365,116,107,	0,18288,20995,
#Partially deleted in new
chr2	127505554	127526440	chr2:127505554-127526440	0	-	127505554	127505554	8553170	4	198,28,116,266,	0,1137,18121,20620,
#Partially deleted in new
chr2	127535801	127637728	chr2:127535801-127637728	3	+	127559722	127637417	0	47	30,41,114,153,185,122,143,114,154,77,120,143,211,136,164,138,153,99,95,85,219,171,210,168,128,127,120,174,228,168,118,127,164,182,131,158,154,156,106,114,88,107,186,117,84,120,413,	0,23898,28351,29431,30841,33987,38118,40793,42331,44944,46089,46502,48320,48976,52590,54290,56992,57744,60660,70042,71404,72906,73704,74047,76674,84538,86180,87400,88291,89566,91173,91382,92570,93843,94976,95404,95798,96444,97456,98374,98794,99318,99920,100406,100743,100992,101514,
#Partially deleted in new
chr2	127559690	127637728	chr2:127559690-127637728	1	+	127559722	127637417	0	46	50,114,153,185,122,143,114,154,77,120,143,211,136,164,138,153,99,95,85,219,171,210,168,128,127,120,174,228,168,118,127,164,182,131,158,154,156,106,114,88,107,186,117,84,120,413,	0,4462,5542,6952,10098,14229,16904,18442,21055,22200,22613,24431,25087,28701,30401,33103,33855,36771,46153,47515,49017,49815,50158,52785,60649,62291,63511,64402,65677,67284,67493,68681,69954,71087,71515,71909,72555,73567,74485,74905,75429,76031,76517,76854,77103,77625,
#Partially deleted in new
chr2	127609853	127612504	chr2:127609853-127612504	0	+	127609853	127612504	789624	3	163,78,29,	0,2396,2622,
#Partially deleted in new
chr2	127619981	127624320	chr2:127619981-127624320	0	+	127620460	127624320	789624	5	173,127,120,174,228,	0,358,2000,3220,4111,
#Partially deleted in new
chr2	127619997	127637729	chr2:127619997-127637729	0	+	127619997	127619997	8553170	19	469,120,174,228,168,118,127,164,182,131,158,154,156,106,1732,117,84,120,414,	0,1984,3204,4095,5370,6977,7186,8374,9647,10780,11208,11602,12248,13260,14178,16210,16547,16796,17318,
#Partially deleted in new
chr2	127620025	127637726	chr2:127620025-127637726	1	+	127620460	127637417	789624	23	227,127,120,174,228,168,118,127,164,182,131,158,154,156,106,114,88,107,186,117,84,120,411,	0,314,1956,3176,4067,5342,6949,7158,8346,9619,10752,11180,11574,12220,13232,14150,14570,15094,15696,16182,16519,16768,17290,
#Partially deleted in new
chr2	127620034	127637725	chr2:127620034-127637725	0	+	127620034	127620034	8553170	20	432,120,174,228,168,118,127,164,182,131,158,154,156,106,508,107,186,117,84,932,	0,1947,3167,4058,5333,6940,7149,8337,9610,10743,11171,11565,12211,13223,14141,15085,15687,16173,16510,16759,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	127625996	127626848	chr2:127625996-127626848	3	-	127625996	127625996	8553170	1	852,	0,
#Deleted in new
chr2	127634225	127637696	chr2:127634225-127637696	0	+	127634225	127634225	8553170	7	458,107,186,117,84,120,381,	0,894,1496,1982,2319,2568,3090,
#Deleted in new
chr2	127638380	127642131	chr2:127638380-127642131	0	-	127639280	127642131	789624	5	1048,76,49,93,143,	0,1689,1889,2515,3608,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	127638424	127656085	chr2:127638424-127656085	0	-	127638424	127638424	8553170	5	1004,249,2177,121,1256,	0,1645,2471,15999,16405,
#Partially deleted in new
chr2	127638425	127664546	chr2:127638425-127664546	1	-	127639280	127664388	0	10	1003,76,49,93,151,150,121,67,160,241,	0,1644,1844,2470,3623,4497,15998,16404,18977,25880,
#Deleted in new
chr2	127638425	127643228	chr2:127638425-127643228	1	-	127639280	127642975	0	6	1003,76,49,93,151,306,	0,1644,1844,2470,3623,4497,
#Deleted in new
chr2	127638425	127644110	chr2:127638425-127644110	1	-	127639280	127642975	0	8	1003,76,49,93,151,150,56,42,	0,1644,1844,2470,3623,4497,5069,5643,
#Partially deleted in new
chr2	127638425	127664419	chr2:127638425-127664419	0	-	127638425	127638425	8553170	9	1003,76,49,93,151,150,473,160,114,	0,1644,1844,2470,3623,4497,15998,18977,25880,
#Deleted in new
chr2	127638425	127640403	chr2:127638425-127640403	0	-	127638425	127638425	8553170	2	1003,134,	0,1844,
#Partially deleted in new
chr2	127638427	127675190	chr2:127638427-127675190	3	-	127639280	127675024	0	10	1001,76,49,93,151,150,121,67,160,177,	0,1642,1842,2468,3621,4495,15996,16402,18975,36586,
#Partially deleted in new
chr2	127638427	127674309	chr2:127638427-127674309	1	-	127639280	127657558	0	10	1001,76,49,93,151,150,121,67,160,632,	0,1642,1842,2468,3621,4495,15996,16402,18975,35250,
#Partially deleted in new
chr2	127638427	127675286	chr2:127638427-127675286	1	-	127639280	127657558	0	12	1001,76,49,93,151,150,121,67,160,66,108,273,	0,1642,1842,2468,3621,4495,15996,16402,18975,35250,35886,36586,
#Partially deleted in new
chr2	127638427	127681786	chr2:127638427-127681786	1	-	127639280	127657558	0	10	1001,76,49,93,151,150,121,67,160,467,	0,1642,1842,2468,3621,4495,15996,16402,18975,42892,
#Partially deleted in new
chr2	127638427	127664452	chr2:127638427-127664452	0	-	127638427	127638427	8553170	9	1001,76,719,151,150,121,67,160,147,	0,1642,1842,3621,4495,15996,16402,18975,25878,
#Deleted in new
chr2	127638427	127642351	chr2:127638427-127642351	0	-	127638427	127638427	8553170	4	1001,76,719,303,	0,1642,1842,3621,
#Partially deleted in new
chr2	127638469	127648253	chr2:127638469-127648253	1	-	127639280	127642975	0	7	959,76,49,93,151,150,217,	0,1600,1800,2426,3579,4453,9567,
#Partially deleted in new
chr2	127638720	127675102	chr2:127638720-127675102	1	-	127639280	127675024	0	11	708,76,49,93,151,150,121,67,160,66,89,	0,1349,1549,2175,3328,4202,15703,16109,18682,34957,36293,
#Partially deleted in new
chr2	127638982	127650538	chr2:127638982-127650538	0	-	127640281	127642975	789624	6	446,76,49,93,150,116,	0,1087,1287,1913,3940,11440,
#Partially deleted in new
chr2	127639196	127650538	chr2:127639196-127650538	1	-	127639280	127642975	0	7	232,76,49,93,151,150,116,	0,873,1073,1699,2852,3726,11226,
#Partially deleted in new
chr2	127642124	127646678	chr2:127642124-127646678	0	-	127642124	127642124	8553170	3	75,150,306,	0,798,4248,
#Partially deleted in new
chr2	127645863	127652638	chr2:127645863-127652638	3	+	127650011	127651755	789624	4	381,229,65,1923,	0,2194,4147,4852,
#Partially deleted in new
chr2	127645993	127652639	chr2:127645993-127652639	0	+	127645993	127645993	8553170	2	251,1924,	0,4722,
#Partially deleted in new
chr2	127645993	127651476	chr2:127645993-127651476	0	+	127645993	127645993	8553170	3	251,229,761,	0,2064,4722,
#Partially deleted in new
chr2	127646171	127652639	chr2:127646171-127652639	1	+	127650011	127651755	789624	3	73,65,1924,	0,3839,4544,
#Partially deleted in new
chr2	127648116	127651061	chr2:127648116-127651061	0	+	127650011	127651061	789624	3	170,65,346,	0,1894,2599,
#Deleted in new
chr2	127649938	127651755	chr2:127649938-127651755	1	+	127650011	127651755	789624	2	137,1040,	0,777,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr2	127701021	127811147	chr2:127701021-127811147	3	-	127706322	127770981	0	22	5531,216,93,164,439,109,1089,153,140,87,95,111,79,155,127,98,152,96,105,69,227,136,	0,7655,8468,8671,12561,16133,18243,20814,21569,21936,22231,23311,23865,24039,25629,62040,63806,64152,67167,67911,69756,109990,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	127701507	127705242	chr2:127701507-127705242	3	+	127701528	127702176	789624	1	3735,	0,
#Partially deleted in new
chr2	127726651	127811187	chr2:127726651-127811187	0	-	127726651	127768971	789624	7	126,98,152,96,105,69,176,	0,36410,38176,38522,41537,42281,84360,
#Partially deleted in new
chr2	127735387	127811171	chr2:127735387-127811171	1	-	127738004	127770981	0	8	2667,98,152,96,105,69,227,160,	0,27674,29440,29786,32801,33545,35390,75624,
#Partially deleted in new
chr2	127762532	127811171	chr2:127762532-127811171	1	-	127764472	127770981	0	6	2447,96,105,69,227,160,	0,2641,5656,6400,8245,48479,
#Partially deleted in new
chr2	127768211	127810953	chr2:127768211-127810953	0	-	127768211	127770981	789624	4	82,69,227,205,	0,721,2566,42537,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	127798902	127798998	chr2:127798902-127798998	3	-	127798902	127798902	8553170	1	96,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	127829746	127829852	chr2:127829746-127829852	3	-	127829746	127829746	8553170	1	106,	0,
#Partially deleted in new
chr2	127840605	127841763	chr2:127840605-127841763	7	-	127840605	127840605	16724991	1	1158,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	127843550	127858157	chr2:127843550-127858157	3	-	127848106	127858100	0	4	4635,96,181,130,	0,7039,9374,14477,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	127845235	127845341	chr2:127845235-127845341	3	+	127845235	127845235	8553170	1	106,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	127846698	127858117	chr2:127846698-127858117	1	-	127848106	127858100	789624	3	1487,181,90,	0,6226,11329,
#Deleted in new
chr2	127846735	127847084	chr2:127846735-127847084	7	-	127846735	127846735	16724991	1	349,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	127847240	127858119	chr2:127847240-127858119	0	-	127847240	127847240	8553170	2	945,92,	0,10787,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	127847840	127857949	chr2:127847840-127857949	1	-	127848106	127853064	789624	4	345,96,181,184,	0,2749,5084,9925,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	127856889	127857147	chr2:127856889-127857147	3	+	127856889	127856889	8553170	1	258,	0,
#Partially deleted in new
chr2	127861629	127885922	chr2:127861629-127885922	3	-	127865093	127874234	789624	8	3576,97,91,115,111,445,110,113,	0,5270,7824,9184,9619,12198,22573,24180,
#Partially deleted in new
chr2	127861636	127884860	chr2:127861636-127884860	1	-	127865093	127874234	789624	8	3569,97,91,115,111,445,110,103,	0,5263,7817,9177,9612,12191,22566,23121,
#Deleted in new
chr2	127886555	127887185	chr2:127886555-127887185	3	+	127886555	127886555	8553170	1	630,	0,
#Deleted in new
chr2	127931326	127931440	chr2:127931326-127931440	7	+	127931326	127931326	16724991	1	114,	0,
#Partially deleted in new
chr2	127941216	128027295	chr2:127941216-128027295	1	-	127942005	128027163	789624	21	948,114,104,126,249,359,105,178,303,122,142,105,91,148,125,125,112,159,236,118,204,	0,1207,4239,8652,8943,13769,36768,45568,48347,51970,55133,58524,58839,59090,69052,71813,73586,75172,76463,84964,85875,
#Partially deleted in new
chr2	127941217	128027293	chr2:127941217-128027293	1	-	127942005	128027163	789624	20	947,114,104,126,249,359,178,303,122,142,105,91,148,125,125,112,159,236,118,202,	0,1206,4238,8651,8942,13768,45567,48346,51969,55132,58523,58838,59089,69051,71812,73585,75171,76462,84963,85874,
#Partially deleted in new
chr2	127941223	128028120	chr2:127941223-128028120	3	-	127942005	128026292	789624	21	941,114,104,126,249,359,105,175,303,122,142,105,91,148,125,125,112,159,236,118,181,	0,1200,4232,8645,8936,13762,36761,45561,48340,51963,55126,58517,58832,59083,69045,71806,73579,75165,76456,84957,86716,
#Partially deleted in new
chr2	127941223	128028120	chr2:127941223-128028120	1	-	127942005	128026292	789624	21	941,114,104,126,249,359,105,178,303,122,142,105,91,148,125,125,112,159,236,118,181,	0,1200,4232,8645,8936,13762,36761,45561,48340,51963,55126,58517,58832,59083,69045,71806,73579,75165,76456,84957,86716,
#Partially deleted in new
chr2	128010350	128027313	chr2:128010350-128027313	0	-	128010350	128026292	789624	7	43,125,112,159,236,118,56,	0,2679,4452,6038,7329,15830,16907,
#Partially deleted in new
chr2	128016387	128028059	chr2:128016387-128028059	0	-	128016387	128026292	789624	4	85,236,118,120,	0,1292,9793,11552,
#Deleted in new
chr2	128067193	128067407	chr2:128067193-128067407	7	+	128067193	128067193	16724991	1	214,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	128067799	128067901	chr2:128067799-128067901	3	+	128067799	128067799	8553170	1	102,	0,
#Partially deleted in new
chr2	128091199	128108054	chr2:128091199-128108054	0	+	128091357	128103094	789624	5	183,136,67,83,117,	0,6229,11879,12732,16738,
#Partially deleted in new
chr2	128091207	128171390	chr2:128091207-128171390	0	+	128091357	128109637	789624	26	175,136,113,175,97,79,101,100,61,92,151,120,86,136,132,165,121,99,24,95,207,132,131,96,103,186,	0,6221,18426,21876,23916,25057,29148,29991,31978,36153,37821,41933,43668,47509,51886,54595,61576,64281,65184,66044,68306,69252,69930,73522,79080,79997,
#Partially deleted in new
chr2	128091210	128191428	chr2:128091210-128191428	0	+	128091357	128091498	789624	41	386,136,83,131,113,175,97,79,101,100,61,92,151,120,86,136,132,165,121,99,24,95,207,132,131,96,103,80,190,159,86,85,89,102,85,183,161,115,117,166,1712,	0,6218,12721,16727,18423,21873,23913,25054,29145,29988,31975,36150,37818,41930,43665,47506,51883,54592,61573,64278,65181,66041,68303,69249,69927,73519,79077,79994,81362,82570,83562,85603,86621,87257,88575,89679,90919,92464,95472,96238,98506,
#Boundary problem: need 41, got 0, diff 41, mapped 0.0
chr2	128091310	128195677	chr2:128091310-128195677	3	+	128091357	128189742	789624	41	105,136,83,131,113,175,97,79,101,100,61,92,151,120,86,136,132,165,121,99,24,95,207,132,131,96,103,80,190,159,86,85,89,102,85,183,161,115,117,166,5961,	0,6118,12621,16627,18323,21773,23813,24954,29045,29888,31875,36050,37718,41830,43565,47406,51783,54492,61473,64178,65081,65941,68203,69149,69827,73419,78977,79894,81262,82470,83462,85503,86521,87157,88475,89579,90819,92364,95372,96138,98406,
#Partially deleted in new
chr2	128139791	128140516	chr2:128139791-128140516	7	-	128139791	128139791	16724991	1	725,	0,
#Partially deleted in new
chr2	128145651	128160549	chr2:128145651-128160549	0	+	128145651	128145651	8553170	6	316,121,99,95,207,90,	0,7132,9837,11600,13862,14808,
#Deleted in new
chr2	128151153	128151304	chr2:128151153-128151304	7	-	128151153	128151153	16724991	1	151,	0,
#Partially deleted in new
chr2	128179785	128189947	chr2:128179785-128189947	0	+	128179785	128189742	789624	4	85,117,166,231,	0,6897,7663,9931,
#Partially deleted in new
chr2	128187236	128189984	chr2:128187236-128189984	0	+	128187236	128187236	8553170	3	83,166,268,	0,212,2480,
#Deleted in new
chr2	128199900	128200195	chr2:128199900-128200195	7	+	128199900	128199900	16724991	1	295,	0,
#Partially deleted in new
chr2	128203360	128203775	chr2:128203360-128203775	7	+	128203360	128203360	16724991	1	415,	0,
#Partially deleted in new
chr2	128217587	128218072	chr2:128217587-128218072	7	+	128217587	128217587	16724991	1	485,	0,
#Partially deleted in new
chr2	128265479	128318577	chr2:128265479-128318577	3	-	128268161	128318563	789624	2	3391,541,	0,52557,
#Partially deleted in new
chr2	128268689	128290196	chr2:128268689-128290196	0	-	128268689	128268689	8553170	2	181,403,	0,21104,
#Partially deleted in new
chr2	128289644	128318472	chr2:128289644-128318472	0	-	128289644	128289644	8553170	2	149,436,	0,28392,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	128350828	128350927	chr2:128350828-128350927	3	-	128350828	128350828	8553170	1	99,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	128445080	128445198	chr2:128445080-128445198	7	-	128445080	128445080	16724991	1	118,	0,
#Partially deleted in new
chr2	128518787	128519177	chr2:128518787-128519177	7	-	128518787	128518787	16724991	1	390,	0,
#Partially deleted in new
chr2	128580490	128581576	chr2:128580490-128581576	3	-	128580490	128580490	8553170	2	159,198,	0,888,
#Partially deleted in new
chr2	129063845	129071725	chr2:129063845-129071725	3	-	129063845	129063845	8553170	2	584,76,	0,7804,
#Partially deleted in new
chr2	129242172	129273848	chr2:129242172-129273848	3	-	129242172	129242172	789624	5	1478,207,77,209,242,	0,1970,2980,7693,31434,
#Partially deleted in new
chr2	129496296	129496788	chr2:129496296-129496788	7	+	129496296	129496296	16724991	1	492,	0,
#Partially deleted in new
chr2	129869192	129877553	chr2:129869192-129877553	0	-	129869192	129869192	8553170	2	343,220,	0,8141,
#Deleted in new
chr2	129922862	129923809	chr2:129922862-129923809	7	-	129922862	129922862	16724991	2	137,252,	0,695,
#Partially deleted in new
chr2	129922862	129934317	chr2:129922862-129934317	5	-	129922862	129922862	16724991	3	137,124,139,	0,695,11316,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	129923176	129946703	chr2:129923176-129946703	3	+	129923176	129923176	789624	4	105,118,123,2052,	0,7552,10212,21475,
#Partially deleted in new
chr2	129923557	129925788	chr2:129923557-129925788	5	-	129923557	129923557	16724991	2	124,99,	0,2132,
#Deleted in new
chr2	129939847	129940217	chr2:129939847-129940217	7	-	129939847	129939847	16724991	1	370,	0,
#Partially deleted in new
chr2	129966591	129980466	chr2:129966591-129980466	7	-	129966591	129966591	16724991	6	1787,52,155,144,133,183,	0,2159,10462,12356,13445,13692,
#Partially deleted in new
chr2	129968257	129968380	chr2:129968257-129968380	5	-	129968257	129968257	16724991	1	123,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	129978513	129980412	chr2:129978513-129980412	4	-	129978513	129978513	16724991	1	1899,	0,
#Deleted in new
chr2	129979663	129982738	chr2:129979663-129982738	3	+	129980115	129980880	789624	1	3075,	0,
#Partially deleted in new
chr2	129988157	129990530	chr2:129988157-129990530	7	-	129988157	129988157	16724991	2	40,171,	0,2202,
#Partially deleted in new
chr2	129990455	130028412	chr2:129990455-130028412	7	-	129990455	129990455	16724991	2	83,104,	0,37853,
#Partially deleted in new
chr2	129992601	129993105	chr2:129992601-129993105	7	-	129992601	129992601	16724991	1	504,	0,
#Partially deleted in new
chr2	129992888	129994040	chr2:129992888-129994040	7	+	129992888	129992888	16724991	1	1152,	0,
#Partially deleted in new
chr2	130006199	130009123	chr2:130006199-130009123	7	+	130006199	130006199	16724991	8	146,261,54,321,444,739,67,108,	0,225,560,941,1287,1738,2740,2816,
#Partially deleted in new
chr2	130012064	130034699	chr2:130012064-130034699	4	-	130012064	130012064	16724991	3	199,175,390,	0,16244,22245,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	130026002	130031918	chr2:130026002-130031918	4	-	130026002	130026002	16724991	2	183,3610,	0,2306,
#Partially deleted in new
chr2	130026844	130051131	chr2:130026844-130051131	5	-	130026844	130026844	16724991	12	693,175,68,121,129,45,171,224,198,194,345,1316,	0,1464,7465,7866,8289,12289,13545,18512,20337,21581,22223,22971,
#Partially deleted in new
chr2	130028308	130040560	chr2:130028308-130040560	5	-	130028308	130028308	16724991	6	175,68,121,129,45,171,	0,6001,6402,6825,10825,12081,
#Deleted in new
chr2	130034787	130035436	chr2:130034787-130035436	4	-	130034787	130034787	16724991	2	44,303,	0,346,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	130036957	130038422	chr2:130036957-130038422	7	+	130036957	130036957	16724991	2	253,789,	0,676,
#Deleted in new
chr2	130048425	130049440	chr2:130048425-130049440	7	-	130048425	130048425	16724991	3	118,67,309,	0,314,706,
#Partially deleted in new
chr2	130074029	130129222	chr2:130074029-130129222	3	-	130074243	130120515	789624	17	1543,121,182,45,71,71,167,45,71,71,138,107,174,115,614,156,151,	0,3051,11784,12313,14037,19408,25440,26646,28080,33979,36513,37965,40851,41184,45965,53679,55042,
#Deleted in new
chr2	130082091	130082220	chr2:130082091-130082220	7	-	130082091	130082091	16724991	1	129,	0,
#Partially deleted in new
chr2	130106460	130120867	chr2:130106460-130120867	1	-	130106548	130120515	789624	7	108,71,138,107,174,115,873,	0,1548,4082,5534,8420,8753,13534,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	130109203	130109310	chr2:130109203-130109310	3	-	130109203	130109203	8553170	1	107,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	130129620	130139417	chr2:130129620-130139417	7	+	130129620	130129620	16724991	6	178,401,133,234,88,807,	0,5524,7071,8017,8455,8990,
#Deleted in new
chr2	130135977	130137759	chr2:130135977-130137759	5	+	130135977	130135977	16724991	4	160,171,80,122,	0,250,876,1660,
#Partially deleted in new
chr2	130139286	130145134	chr2:130139286-130145134	3	-	130139554	130144996	789624	8	404,57,74,193,139,249,45,388,	0,604,736,892,1871,2846,3982,5460,
#Partially deleted in new
chr2	130139286	130145079	chr2:130139286-130145079	1	-	130139554	130144996	789624	8	404,57,74,193,139,51,45,333,	0,604,736,892,1871,2846,3982,5460,
#Deleted in new
chr2	130139286	130143028	chr2:130139286-130143028	0	-	130139286	130139286	8553170	4	404,57,74,2850,	0,604,736,892,
#Partially deleted in new
chr2	130139288	130145133	chr2:130139288-130145133	1	-	130139679	130144996	789624	7	402,57,74,139,249,45,387,	0,602,734,1869,2844,3980,5458,
#Deleted in new
chr2	130139426	130140073	chr2:130139426-130140073	0	-	130139426	130139426	8553170	2	521,51,	0,596,
#Partially deleted in new
chr2	130140282	130145076	chr2:130140282-130145076	0	-	130142300	130144996	789624	5	89,139,221,45,330,	0,875,1850,2986,4464,
#Partially deleted in new
chr2	130141016	130145033	chr2:130141016-130145033	1	-	130141153	130144996	789624	4	280,51,45,413,	0,1116,2252,3604,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	130141157	130145016	chr2:130141157-130145016	0	-	130144442	130144996	789624	5	139,249,45,103,270,	0,975,2111,3214,3589,
#Partially deleted in new
chr2	130142187	130144994	chr2:130142187-130144994	0	-	130142187	130144994	789624	3	194,45,374,	0,1081,2433,
#Partially deleted in new
chr2	130142779	130145083	chr2:130142779-130145083	1	-	130142885	130144996	789624	2	534,337,	0,1967,
#Partially deleted in new
chr2	130143210	130145078	chr2:130143210-130145078	0	-	130143210	130144996	789624	2	103,458,	0,1410,
#Partially deleted in new
chr2	130151391	130181757	chr2:130151391-130181757	1	-	130152554	130181601	789624	17	1493,129,132,234,206,164,101,91,146,72,133,152,53,109,87,84,228,	0,1651,1927,2310,2885,3704,4643,5193,5859,12982,16066,20957,21233,21395,23522,25162,30138,
#Partially deleted in new
chr2	130151404	130181579	chr2:130151404-130181579	0	-	130173327	130176592	789624	19	1480,129,132,234,206,164,101,91,146,87,72,133,152,53,109,76,87,84,50,	0,1638,1914,2297,2872,3691,4630,5180,5846,9781,12969,16053,20944,21220,21382,21874,23509,25149,30125,
#Partially deleted in new
chr2	130151407	130181601	chr2:130151407-130181601	1	-	130152554	130181601	789624	19	1477,129,132,234,206,164,101,91,146,72,133,152,53,109,76,143,87,84,72,	0,1635,1911,2294,2869,3688,4627,5177,5843,12966,16050,20941,21217,21379,21871,22106,23506,25146,30122,
#Partially deleted in new
chr2	130151407	130181593	chr2:130151407-130181593	0	-	130173556	130176592	789624	19	1477,129,132,234,206,164,101,91,146,72,133,152,53,109,76,91,87,84,64,	0,1635,1911,2294,2869,3688,4627,5177,5843,12966,16050,20941,21217,21379,21871,22106,23506,25146,30122,
#Partially deleted in new
chr2	130151408	130182750	chr2:130151408-130182750	3	-	130152554	130181601	789624	20	1476,129,132,234,206,164,101,91,146,87,72,133,152,53,109,76,143,87,84,1221,	0,1634,1910,2293,2868,3687,4626,5176,5842,9777,12965,16049,20940,21216,21378,21870,22105,23505,25145,30121,
#Partially deleted in new
chr2	130151408	130172843	chr2:130151408-130172843	0	-	130152554	130172843	789624	15	1476,129,132,234,206,164,101,229,146,87,72,133,152,53,57,	0,1634,1910,2293,2868,3687,4626,5176,5842,9777,12965,16049,20940,21216,21378,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	130151408	130157953	chr2:130151408-130157953	0	-	130151408	130151408	8553170	7	1476,129,132,234,983,641,703,	0,1634,1910,2293,2868,4626,5842,
#Deleted in new
chr2	130151408	130156263	chr2:130151408-130156263	0	-	130151408	130151408	8553170	7	1476,129,132,234,206,164,229,	0,1634,1910,2293,2868,3687,4626,
#Deleted in new
chr2	130152745	130157255	chr2:130152745-130157255	0	-	130152745	130157255	789624	7	139,234,206,164,101,91,5,	0,956,1531,2350,3289,3839,4505,
#Deleted in new
chr2	130153109	130154100	chr2:130153109-130154100	0	-	130153109	130153109	8553170	3	62,132,399,	0,209,592,
#Deleted in new
chr2	130153355	130156048	chr2:130153355-130156048	0	-	130153355	130156048	789624	5	95,234,128,164,14,	0,346,999,1740,2679,
#Deleted in new
chr2	130154093	130156140	chr2:130154093-130156140	0	-	130154093	130154093	8553170	3	389,164,106,	0,1002,1941,
#Partially deleted in new
chr2	130154276	130172492	chr2:130154276-130172492	0	-	130154276	130172492	789624	6	206,164,101,72,133,144,	0,819,1758,10097,13181,18072,
#Partially deleted in new
chr2	130155095	130172656	chr2:130155095-130172656	0	-	130156116	130164433	789624	8	164,101,42,146,72,133,152,32,	0,939,1489,2155,9278,12362,17253,17529,
#Partially deleted in new
chr2	130155095	130172455	chr2:130155095-130172455	0	-	130155095	130172455	789624	7	164,83,91,146,72,133,107,	0,957,1489,2155,9278,12362,17253,
#Partially deleted in new
chr2	130156026	130181595	chr2:130156026-130181595	0	-	130156026	130156026	8553170	6	109,91,72,133,84,66,	0,558,8347,11431,20527,25503,
#Deleted in new
chr2	130156045	130157616	chr2:130156045-130157616	0	-	130156045	130156045	8553170	3	90,91,366,	0,539,1205,
#Partially deleted in new
chr2	130157360	130181596	chr2:130157360-130181596	0	-	130167545	130176592	789624	7	36,87,72,133,87,84,67,	0,3825,7013,10097,17553,19193,24169,
#Partially deleted in new
chr2	130172833	130181542	chr2:130172833-130181542	0	-	130172833	130176592	789624	6	62,76,143,87,84,247,	0,445,680,2080,3720,8462,
#Partially deleted in new
chr2	130181736	130190713	chr2:130181736-130190713	0	+	130181736	130190626	789624	3	61,149,245,	0,890,8732,
#Partially deleted in new
chr2	130181771	130190695	chr2:130181771-130190695	0	+	130181771	130190626	789624	3	59,149,227,	0,855,8697,
#Partially deleted in new
chr2	130181927	130190727	chr2:130181927-130190727	3	+	130182282	130190626	789624	3	525,149,259,	0,699,8541,
#Partially deleted in new
chr2	130182256	130190712	chr2:130182256-130190712	1	+	130182282	130190626	789624	4	196,149,180,244,	0,370,1530,8212,
#Partially deleted in new
chr2	130182312	130190729	chr2:130182312-130190729	0	+	130182312	130190691	789624	2	140,261,	0,8156,
#Deleted in new
chr2	130182414	130183171	chr2:130182414-130183171	0	+	130182414	130182414	8553170	2	38,545,	0,212,
#Partially deleted in new
chr2	130182554	130190727	chr2:130182554-130190727	0	+	130182554	130182554	8553170	2	221,259,	0,7914,
#Partially deleted in new
chr2	130182679	130188262	chr2:130182679-130188262	0	+	130182679	130182679	8553170	2	96,138,	0,5445,
#Partially deleted in new
chr2	130191742	130198461	chr2:130191742-130198461	3	-	130191830	130198360	789624	5	385,681,149,223,104,	0,2043,3336,4406,6615,
#Partially deleted in new
chr2	130202311	130212628	chr2:130202311-130212628	7	+	130202311	130202311	16724991	5	128,234,81,124,51,	0,1857,4932,7133,10266,
#Deleted in new
chr2	130212869	130213490	chr2:130212869-130213490	7	-	130212869	130212869	16724991	1	621,	0,
#Deleted in new
chr2	130229378	130231613	chr2:130229378-130231613	7	+	130229378	130229378	16724991	1	2235,	0,
#Deleted in new
chr2	130231354	130232106	chr2:130231354-130232106	5	+	130231354	130231354	16724991	1	752,	0,
#Partially deleted in new
chr2	130245970	130248770	chr2:130245970-130248770	7	+	130245970	130245970	16724991	5	171,132,100,51,120,	0,1923,2183,2601,2680,
#Partially deleted in new
chr2	130251567	130252559	chr2:130251567-130252559	7	+	130251567	130251567	16724991	1	992,	0,
#Partially deleted in new
chr2	130270439	130272272	chr2:130270439-130272272	7	+	130270439	130270439	16724991	3	40,125,482,	0,111,1351,
#Deleted in new
chr2	130272478	130273511	chr2:130272478-130273511	7	+	130272478	130272478	16724991	1	1033,	0,
#Deleted in new
chr2	130273907	130275449	chr2:130273907-130275449	7	+	130273907	130273907	16724991	1	1542,	0,
#Deleted in new
chr2	130275591	130276257	chr2:130275591-130276257	7	+	130275591	130275591	16724991	1	666,	0,
#Deleted in new
chr2	130276506	130277187	chr2:130276506-130277187	7	+	130276506	130276506	16724991	1	681,	0,
#Deleted in new
chr2	130277183	130277957	chr2:130277183-130277957	7	+	130277183	130277183	16724991	1	774,	0,
#Deleted in new
chr2	130278035	130278376	chr2:130278035-130278376	7	+	130278035	130278035	16724991	1	341,	0,
#Deleted in new
chr2	130278443	130278739	chr2:130278443-130278739	7	+	130278443	130278443	16724991	1	296,	0,
#Deleted in new
chr2	130278756	130280110	chr2:130278756-130280110	7	+	130278756	130278756	16724991	1	1354,	0,
#Deleted in new
chr2	130280298	130282105	chr2:130280298-130282105	7	+	130280298	130280298	16724991	1	1807,	0,
#Deleted in new
chr2	130282084	130282606	chr2:130282084-130282606	7	-	130282084	130282084	16724991	1	522,	0,
#Deleted in new
chr2	130282678	130283329	chr2:130282678-130283329	7	+	130282678	130282678	16724991	1	651,	0,
#Deleted in new
chr2	130293821	130294405	chr2:130293821-130294405	7	+	130293821	130293821	16724991	1	584,	0,
#Deleted in new
chr2	130313933	130314411	chr2:130313933-130314411	7	-	130313933	130313933	16724991	1	478,	0,
#Deleted in new
chr2	130330141	130330285	chr2:130330141-130330285	7	-	130330141	130330141	16724991	1	144,	0,
#Partially deleted in new
chr2	130338240	130342349	chr2:130338240-130342349	3	-	130339119	130342125	789624	5	992,132,83,104,335,	0,2667,3426,3600,3774,
#Partially deleted in new
chr2	130338242	130342349	chr2:130338242-130342349	0	-	130339610	130342125	789624	6	990,203,132,83,104,335,	0,1317,2665,3424,3598,3772,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	130338246	130342135	chr2:130338246-130342135	0	-	130338246	130338246	8553170	2	986,2576,	0,1313,
#Partially deleted in new
chr2	130338495	130342324	chr2:130338495-130342324	1	-	130339119	130342229	789624	5	737,132,83,104,191,	0,2412,3171,3345,3638,
#Partially deleted in new
chr2	130342224	130346624	chr2:130342224-130346624	3	+	130342932	130346468	789624	9	711,109,84,110,133,155,95,74,269,	0,861,2404,3151,3342,3554,3793,3976,4131,
#Partially deleted in new
chr2	130342876	130346519	chr2:130342876-130346519	1	+	130342932	130346364	789624	9	59,109,84,110,133,155,95,49,164,	0,209,1752,2499,2690,2902,3141,3324,3479,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	130342893	130347351	chr2:130342893-130347351	0	+	130342893	130342893	8553170	7	301,84,110,133,95,74,996,	0,1735,2482,2673,3124,3307,3462,
#Partially deleted in new
chr2	130342893	130346411	chr2:130342893-130346411	0	+	130342893	130342893	8553170	8	42,109,84,324,155,95,74,56,	0,192,1735,2482,2885,3124,3307,3462,
#Partially deleted in new
chr2	130342893	130346052	chr2:130342893-130346052	0	+	130342893	130342893	8553170	6	69,109,84,324,155,35,	0,192,1735,2482,2885,3124,
#Partially deleted in new
chr2	130342895	130346272	chr2:130342895-130346272	0	+	130342895	130342895	8553170	7	40,109,84,110,367,95,72,	0,190,1733,2480,2671,3122,3305,
#Partially deleted in new
chr2	130342896	130344946	chr2:130342896-130344946	0	+	130342896	130342896	8553170	2	298,318,	0,1732,
#Partially deleted in new
chr2	130342896	130345761	chr2:130342896-130345761	0	+	130342896	130342896	8553170	5	66,109,84,110,195,	0,189,1732,2479,2670,
#Partially deleted in new
chr2	130342909	130346364	chr2:130342909-130346364	0	+	130345434	130346364	789624	9	53,109,84,110,133,155,95,74,9,	0,176,1719,2466,2657,2869,3108,3291,3446,
#Partially deleted in new
chr2	130342911	130345686	chr2:130342911-130345686	0	+	130342932	130345397	789624	5	24,109,97,110,120,	0,174,1717,2464,2655,
#Partially deleted in new
chr2	130342917	130345020	chr2:130342917-130345020	0	+	130342917	130342917	8553170	3	45,109,392,	0,168,1711,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	130342921	130347810	chr2:130342921-130347810	0	+	130342921	130342921	8553170	8	273,84,110,133,155,95,74,1455,	0,1707,2454,2645,2857,3096,3279,3434,
#Partially deleted in new
chr2	130342923	130346467	chr2:130342923-130346467	0	+	130344694	130346467	789624	9	39,109,97,110,133,155,95,74,112,	0,162,1705,2452,2643,2855,3094,3277,3432,
#Partially deleted in new
chr2	130343269	130346549	chr2:130343269-130346549	0	+	130343269	130346468	789624	8	78,84,110,133,155,95,74,194,	0,1359,2106,2297,2509,2748,2931,3086,
#Deleted in new
chr2	130345632	130346622	chr2:130345632-130346622	0	+	130345632	130345632	8553170	4	67,155,232,267,	0,146,385,723,
#Deleted in new
chr2	130345641	130346341	chr2:130345641-130346341	0	+	130345641	130345641	8553170	3	58,334,141,	0,137,559,
#Deleted in new
chr2	130345944	130346625	chr2:130345944-130346625	0	+	130345944	130345944	8553170	3	168,74,270,	0,256,411,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	130356006	130375409	chr2:130356006-130375409	3	+	130356107	130373224	0	15	194,109,77,96,39,69,63,143,67,78,90,89,227,75,2253,	0,2860,3226,3390,3601,13126,13758,14041,14550,14698,14868,15192,16250,16866,17150,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	130356044	130374571	chr2:130356044-130374571	1	+	130356107	130373224	0	11	156,69,63,143,67,78,90,89,227,75,1415,	0,13088,13720,14003,14512,14660,14830,15154,16212,16828,17112,
#Partially deleted in new
chr2	130356054	130370229	chr2:130356054-130370229	0	+	130356054	130356054	8553170	4	146,69,63,182,	0,13078,13710,13993,
#Partially deleted in new
chr2	130356065	130370188	chr2:130356065-130370188	0	+	130356107	130356653	789624	9	135,56,109,77,96,39,69,63,141,	0,534,2801,3167,3331,3542,13067,13699,13982,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	130358863	130362430	chr2:130358863-130362430	0	+	130358863	130358863	8553170	5	112,77,96,39,275,	0,369,533,744,3292,
#Partially deleted in new
chr2	130358892	130370427	chr2:130358892-130370427	0	+	130358892	130358892	8553170	4	83,69,63,380,	0,10240,10872,11155,
#Deleted in new
chr2	130358949	130359921	chr2:130358949-130359921	0	+	130358949	130358949	8553170	4	26,77,96,314,	0,283,447,658,
#Deleted in new
chr2	130359176	130359661	chr2:130359176-130359661	0	+	130359176	130359176	8553170	2	133,265,	0,220,
#Partially deleted in new
chr2	130368896	130370597	chr2:130368896-130370597	0	+	130368896	130368896	8553170	4	305,63,143,41,	0,868,1151,1660,
#Partially deleted in new
chr2	130370088	130374866	chr2:130370088-130374866	0	+	130370088	130374681	789624	9	102,67,78,90,89,227,75,64,201,	0,468,616,786,1110,2168,2784,3068,4577,
#Partially deleted in new
chr2	130370127	130372453	chr2:130370127-130372453	0	+	130370127	130370127	8553170	5	63,226,90,89,365,	0,429,747,1071,1961,
#Partially deleted in new
chr2	130370309	130372444	chr2:130370309-130372444	0	+	130370309	130370309	8553170	5	314,78,90,89,188,	0,395,565,889,1947,
#Partially deleted in new
chr2	130370432	130370917	chr2:130370432-130370917	0	+	130370432	130370432	8553170	2	350,43,	0,442,
#Partially deleted in new
chr2	130370668	130371313	chr2:130370668-130371313	0	+	130370668	130370668	8553170	2	296,115,	0,530,
#Partially deleted in new
chr2	130371997	130373989	chr2:130371997-130373989	0	+	130371997	130371997	8553170	3	486,75,833,	0,875,1159,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	130372607	130374533	chr2:130372607-130374533	0	+	130372607	130372607	8553170	2	340,1377,	0,549,
#Partially deleted in new
chr2	130416754	130427986	chr2:130416754-130427986	5	-	130416754	130416754	16724991	4	1544,175,68,283,	0,2316,8336,10949,
#Partially deleted in new
chr2	130416755	130425138	chr2:130416755-130425138	4	-	130416755	130416755	16724991	3	186,175,48,	0,2315,8335,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	130417427	130427264	chr2:130417427-130427264	4	-	130417427	130417427	16724991	2	1818,2174,	0,7663,
#Partially deleted in new
chr2	130418150	130427742	chr2:130418150-130427742	4	-	130418150	130418150	16724991	5	148,175,68,125,39,	0,920,6940,7763,9553,
#Partially deleted in new
chr2	130418233	130427775	chr2:130418233-130427775	4	-	130418233	130418233	16724991	6	65,175,68,125,98,72,	0,837,6857,7680,7932,9470,
#Partially deleted in new
chr2	130419070	130431363	chr2:130419070-130431363	7	-	130419070	130419070	16724991	5	175,68,125,55,171,	0,6020,6843,10856,12122,
#Partially deleted in new
chr2	130419158	130427742	chr2:130419158-130427742	4	-	130419158	130419158	16724991	6	87,68,147,125,98,39,	0,5932,6306,6755,7007,8545,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	130426191	130428176	chr2:130426191-130428176	4	-	130426191	130426191	16724991	2	72,473,	0,1512,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	130427730	130429225	chr2:130427730-130429225	7	+	130427730	130427730	16724991	2	228,811,	0,684,
#Partially deleted in new
chr2	130429826	130436383	chr2:130429826-130436383	7	-	130429826	130429826	16724991	3	155,171,226,	0,1366,6331,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	130435661	130441413	chr2:130435661-130441413	5	-	130435661	130435661	16724991	5	720,198,194,281,751,	0,2325,3623,4329,5001,
#Deleted in new
chr2	130439284	130440296	chr2:130439284-130440296	5	-	130439284	130439284	16724991	3	119,99,306,	0,285,706,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	130459454	130509666	chr2:130459454-130509666	3	-	130462815	130509235	789624	15	4690,121,182,45,71,71,167,45,71,71,138,107,174,115,952,	0,6197,14923,15452,17176,22548,28577,29780,31215,37097,39629,41081,43991,44325,49260,
#Partially deleted in new
chr2	130463798	130509287	chr2:130463798-130509287	1	-	130465652	130509235	789624	13	346,13,106,157,13,42,71,71,138,107,174,115,573,	0,1853,1868,10579,24390,25439,26871,32753,35285,36737,39647,39981,44916,
#Partially deleted in new
chr2	130463907	130509287	chr2:130463907-130509287	1	-	130488193	130509235	789624	13	237,121,182,45,71,71,167,71,138,107,174,115,573,	0,1744,10470,10999,12723,18095,24124,32644,35176,36628,39538,39872,44807,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	130497742	130497849	chr2:130497742-130497849	3	-	130497742	130497742	8553170	1	107,	0,
#Partially deleted in new
chr2	130515996	130526691	chr2:130515996-130526691	3	-	130515996	130515996	8553170	2	357,87,	0,10608,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	130517048	130517312	chr2:130517048-130517312	3	-	130517048	130517048	8553170	1	264,	0,
#Partially deleted in new
chr2	130521196	130528006	chr2:130521196-130528006	3	+	130521484	130527895	789624	6	311,50,174,115,110,311,	0,616,760,1593,1972,6499,
#Partially deleted in new
chr2	130521196	130528604	chr2:130521196-130528604	1	+	130521484	130527914	789624	5	311,50,174,110,909,	0,616,760,1972,6499,
#Partially deleted in new
chr2	130521196	130528604	chr2:130521196-130528604	1	+	130521484	130527895	789624	4	311,50,174,909,	0,616,760,6499,
#Partially deleted in new
chr2	130530274	130537182	chr2:130530274-130537182	3	+	130530274	130530274	8553170	2	162,565,	0,6343,
#Partially deleted in new
chr2	130570828	130582368	chr2:130570828-130582368	5	+	130570828	130570828	16724991	3	152,275,111,	0,3448,11429,
#Partially deleted in new
chr2	130570839	130584161	chr2:130570839-130584161	7	+	130570839	130570839	16724991	3	141,176,1901,	0,5833,11421,
#Partially deleted in new
chr2	130570848	130583672	chr2:130570848-130583672	4	+	130570848	130570848	16724991	2	132,1415,	0,11409,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	130570885	130577341	chr2:130570885-130577341	4	+	130570885	130570885	16724991	3	95,275,669,	0,3391,5787,
#Partially deleted in new
chr2	130574330	130582406	chr2:130574330-130582406	4	+	130574330	130574330	16724991	3	221,176,146,	0,2342,7930,
#Partially deleted in new
chr2	130583548	130590463	chr2:130583548-130590463	3	-	130583548	130583548	8553170	2	565,130,	0,6785,
#Partially deleted in new
chr2	130592167	130599575	chr2:130592167-130599575	1	-	130592857	130599287	789624	5	909,110,174,50,311,	0,5326,6474,6742,7097,
#Partially deleted in new
chr2	130592167	130599575	chr2:130592167-130599575	1	-	130592876	130599287	789624	4	909,174,50,311,	0,6474,6742,7097,
#Partially deleted in new
chr2	130592765	130599550	chr2:130592765-130599550	3	-	130592876	130599287	789624	6	311,110,115,174,50,286,	0,4728,5102,5876,6144,6499,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	130603460	130603724	chr2:130603460-130603724	3	+	130603460	130603460	8553170	1	264,	0,
#Partially deleted in new
chr2	130611480	130658091	chr2:130611480-130658091	3	+	130611532	130657877	789624	15	462,115,174,107,138,71,71,45,167,71,71,45,182,121,1543,	0,5309,5584,8564,9985,12583,18468,19928,21009,27138,32502,34256,34648,43440,45068,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	130622837	130622944	chr2:130622837-130622944	3	+	130622837	130622837	8553170	1	107,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	130680049	130685863	chr2:130680049-130685863	7	+	130680049	130680049	16724991	5	813,345,194,168,730,	0,1204,1997,3311,5084,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	130680109	130685852	chr2:130680109-130685852	4	+	130680109	130680109	16724991	5	753,345,194,198,719,	0,1144,1937,3221,5024,
#Partially deleted in new
chr2	130681227	130691691	chr2:130681227-130691691	3	+	130681227	130681227	8553170	5	1013,198,223,171,157,	0,2103,3906,8925,10307,
#Deleted in new
chr2	130681228	130681955	chr2:130681228-130681955	5	+	130681228	130681228	16724991	2	306,99,	0,628,
#Partially deleted in new
chr2	130690132	130702428	chr2:130690132-130702428	5	+	130690132	130690132	16724991	5	191,45,125,68,175,	0,1402,5334,6209,12121,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	130692242	130693770	chr2:130692242-130693770	7	-	130692242	130692242	16724991	2	790,297,	0,1231,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	130693281	130696388	chr2:130693281-130696388	4	+	130693281	130693281	16724991	2	515,47,	0,3060,
#Partially deleted in new
chr2	130693734	130702473	chr2:130693734-130702473	4	+	130693734	130693734	16724991	5	62,98,125,68,220,	0,1502,1732,2607,8519,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	130693758	130702601	chr2:130693758-130702601	4	+	130693758	130693758	16724991	4	38,98,68,348,	0,1478,2583,8495,
#Partially deleted in new
chr2	130702316	130718831	chr2:130702316-130718831	7	+	130702316	130702316	16724991	2	112,332,	0,16183,
#Deleted in new
chr2	130729069	130730336	chr2:130729069-130730336	3	+	130729151	130730195	789624	1	1267,	0,
#Partially deleted in new
chr2	130743537	130755879	chr2:130743537-130755879	3	-	130743537	130743537	8553170	2	509,197,	0,12145,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	130749694	130755835	chr2:130749694-130755835	1	-	130749694	130749694	8553170	2	372,153,	0,5988,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	130755434	130765086	chr2:130755434-130765086	1	+	130762072	130764658	789624	2	240,3033,	0,6619,
#Partially deleted in new
chr2	130755650	130762497	chr2:130755650-130762497	0	+	130762072	130762497	789624	2	155,444,	0,6403,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	130756290	130768134	chr2:130756290-130768134	3	+	130762072	130764658	789624	2	91,6081,	0,5763,
#Partially deleted in new
chr2	130756290	130762613	chr2:130756290-130762613	0	+	130762072	130762613	789624	2	91,560,	0,5763,
#Partially deleted in new
chr2	130776645	130776957	chr2:130776645-130776957	7	+	130776645	130776645	16724991	1	312,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	130830977	130836994	chr2:130830977-130836994	3	-	130830977	130830977	8553170	2	2139,685,	0,5332,
#Deleted in new
chr2	130835437	130836994	chr2:130835437-130836994	0	-	130835437	130835437	8553170	2	588,685,	0,872,
#Partially deleted in new
chr2	130836915	131046189	chr2:130836915-131046189	1	+	130836953	131046189	789624	13	77,3513,306,127,140,180,177,233,130,132,244,78,152,	0,77070,94036,109593,191029,201937,203100,204314,204899,206536,207383,208453,209122,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	130837454	130947230	chr2:130837454-130947230	0	+	130837454	130837454	8553170	4	247,3513,306,722,	0,76531,93497,109054,
#Partially deleted in new
chr2	130916650	131047263	chr2:130916650-131047263	3	+	130930957	131046189	0	14	411,102,306,127,140,180,177,180,233,130,132,244,78,1226,	0,746,14301,29858,111294,122202,123365,123610,124579,125164,126801,127648,128718,129387,
#Partially deleted in new
chr2	130916650	131047263	chr2:130916650-131047263	1	+	130930957	131046189	789624	5	411,102,306,127,1226,	0,746,14301,29858,129387,
#Partially deleted in new
chr2	130916650	131047263	chr2:130916650-131047263	1	+	130930957	131046189	789624	13	411,102,306,127,140,180,177,233,130,132,244,78,1226,	0,746,14301,29858,111294,122202,123365,124579,125164,126801,127648,128718,129387,
#Partially deleted in new
chr2	130916650	131047253	chr2:130916650-131047253	0	+	130916650	130917413	789624	14	411,102,306,127,140,180,177,180,233,130,132,244,78,1216,	0,746,14301,29858,111294,122202,123365,123610,124579,125164,126801,127648,128718,129387,
#Partially deleted in new
chr2	130916964	131046708	chr2:130916964-131046708	0	+	130916964	131046189	789624	4	534,306,127,671,	0,13987,29544,129073,
#Partially deleted in new
chr2	130917396	131047245	chr2:130917396-131047245	1	+	130930957	131045538	0	12	102,306,127,140,180,177,180,233,130,132,244,1877,	0,13555,29112,110548,121456,122619,122864,123833,124418,126055,126902,127972,
#Partially deleted in new
chr2	130917430	131047251	chr2:130917430-131047251	0	+	130917430	131045538	789624	12	68,306,127,140,180,177,180,233,130,132,244,1883,	0,13521,29078,110514,121422,122585,122830,123799,124384,126021,126868,127938,
#Partially deleted in new
chr2	130929761	130929883	chr2:130929761-130929883	3	-	130929761	130929761	8553170	1	122,	0,
#Partially deleted in new
chr2	130929761	130929884	chr2:130929761-130929884	3	-	130929761	130929761	8553170	1	123,	0,
#Partially deleted in new
chr2	130963641	131045446	chr2:130963641-131045446	0	+	130964191	131045446	789624	10	608,140,180,177,180,233,130,132,244,78,	0,64303,75211,76374,76619,77588,78173,79810,80657,81727,
#Partially deleted in new
chr2	131011682	131046189	chr2:131011682-131046189	1	+	131011694	131046189	0	11	226,140,180,177,180,233,130,132,244,78,152,	0,16262,27170,28333,28578,29547,30132,31769,32616,33686,34355,
#Deleted in new
chr2	131034927	131039670	chr2:131034927-131039670	0	+	131034927	131034927	8553170	3	361,180,299,	0,3925,4444,
#Deleted in new
chr2	131034971	131041276	chr2:131034971-131041276	0	+	131034971	131034971	8553170	5	317,180,177,180,47,	0,3881,5044,5289,6258,
#Deleted in new
chr2	131035091	131035262	chr2:131035091-131035262	3	+	131035091	131035262	789624	1	171,	0,
#Deleted in new
chr2	131035484	131040408	chr2:131035484-131040408	0	+	131035484	131035484	8553170	4	157,180,177,148,	0,3368,4531,4776,
#Partially deleted in new
chr2	131039528	131047253	chr2:131039528-131047253	0	+	131039528	131039528	8553170	7	664,180,715,132,244,78,1216,	0,732,1701,3923,4770,5840,6509,
#Partially deleted in new
chr2	131041276	131045558	chr2:131041276-131045558	0	+	131041276	131045538	789624	5	186,130,132,244,190,	0,538,2175,3022,4092,
#Partially deleted in new
chr2	131041312	131043670	chr2:131041312-131043670	0	+	131041312	131041312	8553170	3	150,130,219,	0,502,2139,
#Partially deleted in new
chr2	131041510	131044534	chr2:131041510-131044534	0	+	131041510	131041510	8553170	3	434,132,203,	0,1941,2821,
#Partially deleted in new
chr2	131047875	131093428	chr2:131047875-131093428	3	-	131052902	131082646	789624	7	4577,125,178,143,84,81,97,	0,5015,7396,7677,23979,34701,45456,
#Partially deleted in new
chr2	131052366	131093460	chr2:131052366-131093460	1	-	131052902	131082646	789624	7	86,125,178,143,84,81,247,	0,524,2905,3186,19488,30210,40847,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	131104846	131149851	chr2:131104846-131149851	1	+	131120941	131146773	789624	9	552,45,153,103,40,90,109,42,3215,	0,16087,20906,21837,25874,28055,35320,39561,41790,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	131104846	131147797	chr2:131104846-131147797	1	+	131120941	131146773	0	8	552,45,153,103,40,114,109,1161,	0,16087,20906,21837,25874,28055,35320,41790,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	131104846	131149851	chr2:131104846-131149851	1	+	131120941	131146750	789624	6	552,45,153,103,109,3215,	0,16087,20906,21837,35320,41790,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	131104943	131149852	chr2:131104943-131149852	3	+	131120941	131146773	0	8	455,45,153,103,40,90,106,3216,	0,15990,20809,21740,25777,27958,35226,41693,
#Partially deleted in new
chr2	131105301	131147429	chr2:131105301-131147429	1	+	131120941	131146750	0	6	97,45,153,103,106,793,	0,15632,20451,21382,34868,41335,
#Partially deleted in new
chr2	131105328	131127059	chr2:131105328-131127059	0	+	131105328	131105328	8553170	4	70,45,153,376,	0,15605,20424,21355,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	131105328	131107990	chr2:131105328-131107990	0	+	131105328	131105328	8553170	2	70,530,	0,2132,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	131105335	131147602	chr2:131105335-131147602	1	+	131120941	131146750	0	7	63,45,153,103,40,90,966,	0,15598,20417,21348,25385,27566,41301,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	131105352	131353709	chr2:131105352-131353709	1	+	131120941	131353526	789624	7	46,45,153,103,40,90,690,	0,15581,20400,21331,25368,27549,247667,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	131107555	131147797	chr2:131107555-131147797	1	+	131120941	131146773	0	8	509,45,153,103,40,90,109,1161,	0,13378,18197,19128,23165,25346,32611,39081,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	131118890	131147797	chr2:131118890-131147797	1	+	131120941	131146773	0	8	88,744,153,103,40,90,109,1161,	0,1344,6862,7793,11830,14011,21276,27746,
#Deleted in new
chr2	131177617	131178946	chr2:131177617-131178946	7	-	131177617	131177617	16724991	1	1329,	0,
#Deleted in new
chr2	131181152	131181369	chr2:131181152-131181369	7	-	131181152	131181152	16724991	1	217,	0,
#Partially deleted in new
chr2	131189833	131198007	chr2:131189833-131198007	7	-	131189833	131189833	16724991	10	84,113,140,441,84,73,247,155,124,135,	0,588,992,1509,3367,3685,4265,5855,7536,8039,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	131191640	131209211	chr2:131191640-131209211	3	-	131191640	131191640	8553170	9	143,84,247,155,124,73,238,92,129,	0,1560,2458,4048,5729,6294,9397,12437,17442,
#Deleted in new
chr2	131201141	131202941	chr2:131201141-131202941	7	-	131201141	131201141	16724991	4	134,80,170,161,	0,836,1379,1639,
#Partially deleted in new
chr2	131218066	131265278	chr2:131218066-131265278	3	+	131218402	131264683	789624	15	857,115,174,107,138,71,71,45,167,71,71,45,182,121,1924,	0,5529,5803,8756,10177,12769,18665,20127,21211,27340,32711,34459,34851,43659,45288,
#Partially deleted in new
chr2	131218350	131263591	chr2:131218350-131263591	0	+	131218402	131238222	789624	14	573,145,174,107,138,71,45,167,71,71,45,182,121,237,	0,5245,5519,8472,9893,12485,19843,20927,27056,32427,34175,34567,43375,45004,
#Partially deleted in new
chr2	131218350	131263591	chr2:131218350-131263591	0	+	131218402	131239282	789624	13	573,115,174,107,138,71,167,71,71,45,182,121,237,	0,5245,5519,8472,9893,12485,20927,27056,32427,34175,34567,43375,45004,
#Partially deleted in new
chr2	131218350	131263700	chr2:131218350-131263700	1	+	131218402	131261845	789624	13	573,115,174,107,138,71,71,42,13,157,106,13,346,	0,5245,5519,8472,9893,12485,18381,19843,20924,34592,43375,43483,45004,
#Partially deleted in new
chr2	131218350	131263591	chr2:131218350-131263591	1	+	131218402	131239282	789624	12	573,115,174,107,138,71,167,71,71,182,121,237,	0,5245,5519,8472,9893,12485,20927,27056,32427,34567,43375,45004,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	131229606	131229713	chr2:131229606-131229713	3	+	131229606	131229606	8553170	1	107,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	131279289	131299819	chr2:131279289-131299819	7	+	131279289	131279289	16724991	6	98,194,198,171,45,1033,	0,9465,10739,17553,18933,19497,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	131286817	131292546	chr2:131286817-131292546	4	+	131286817	131286817	16724991	5	753,345,194,198,720,	0,1144,1937,3211,5009,
#Partially deleted in new
chr2	131296842	131309068	chr2:131296842-131309068	5	+	131296842	131296842	16724991	5	171,45,125,68,175,	0,1380,5312,6194,12051,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	131299219	131300444	chr2:131299219-131300444	7	-	131299219	131299219	16724991	1	1225,	0,
#Partially deleted in new
chr2	131303036	131355683	chr2:131303036-131355683	3	+	131303036	131303036	8553170	3	68,175,92,	0,5857,52555,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	131328175	131330857	chr2:131328175-131330857	7	-	131328175	131328175	16724991	3	162,1419,395,	0,548,2287,
#Partially deleted in new
chr2	131335501	131355769	chr2:131335501-131355769	7	+	131335501	131335501	16724991	2	176,178,	0,20090,
#Partially deleted in new
chr2	131352213	131353239	chr2:131352213-131353239	7	-	131352213	131352213	16724991	1	1026,	0,
#Deleted in new
chr2	131361110	131364142	chr2:131361110-131364142	3	-	131362955	131363720	789624	1	3032,	0,
#Partially deleted in new
chr2	131363363	131364881	chr2:131363363-131364881	3	+	131363363	131363363	8553170	3	189,133,143,	0,303,1375,
#Deleted in new
chr2	131369061	131369711	chr2:131369061-131369711	7	-	131369061	131369061	16724991	1	650,	0,
#Deleted in new
chr2	131369784	131370301	chr2:131369784-131370301	7	+	131369784	131369784	16724991	1	517,	0,
#Deleted in new
chr2	131370305	131372075	chr2:131370305-131372075	7	-	131370305	131370305	16724991	1	1770,	0,
#Deleted in new
chr2	131372293	131373650	chr2:131372293-131373650	7	-	131372293	131372293	16724991	1	1357,	0,
#Partially deleted in new
chr2	131373646	131379675	chr2:131373646-131379675	7	-	131373646	131373646	16724991	3	159,45,93,	0,5824,5936,
#Deleted in new
chr2	131379742	131380083	chr2:131379742-131380083	7	-	131379742	131379742	16724991	1	341,	0,
#Deleted in new
chr2	131380152	131380913	chr2:131380152-131380913	7	-	131380152	131380152	16724991	1	761,	0,
#Deleted in new
chr2	131380915	131381590	chr2:131380915-131381590	7	-	131380915	131380915	16724991	1	675,	0,
#Deleted in new
chr2	131381839	131382497	chr2:131381839-131382497	7	-	131381839	131381839	16724991	1	658,	0,
#Deleted in new
chr2	131382642	131384061	chr2:131382642-131384061	7	-	131382642	131382642	16724991	1	1419,	0,
#Deleted in new
chr2	131384460	131385490	chr2:131384460-131385490	7	-	131384460	131384460	16724991	1	1030,	0,
#Deleted in new
chr2	131385699	131386314	chr2:131385699-131386314	7	-	131385699	131385699	16724991	1	615,	0,
#Deleted in new
chr2	131395216	131395542	chr2:131395216-131395542	7	-	131395216	131395216	16724991	1	326,	0,
#Deleted in new
chr2	131398438	131401250	chr2:131398438-131401250	7	-	131398438	131398438	16724991	5	263,116,129,111,181,	0,521,765,1787,2631,
#Partially deleted in new
chr2	131402900	131409049	chr2:131402900-131409049	3	+	131402900	131402900	8553170	4	351,235,70,1205,	0,2312,4562,4944,
#Deleted in new
chr2	131419664	131419784	chr2:131419664-131419784	7	-	131419664	131419664	16724991	1	120,	0,
#Deleted in new
chr2	131423800	131424867	chr2:131423800-131424867	7	-	131423800	131423800	16724991	1	1067,	0,
#Deleted in new
chr2	131442643	131444587	chr2:131442643-131444587	7	-	131442643	131442643	16724991	1	1944,	0,
#Deleted in new
chr2	131460998	131461577	chr2:131460998-131461577	7	+	131460998	131460998	16724991	1	579,	0,
#Deleted in new
chr2	131461820	131463615	chr2:131461820-131463615	3	-	131461820	131461820	8553170	2	305,275,	0,1520,
#Partially deleted in new
chr2	131464899	131492335	chr2:131464899-131492335	0	-	131470315	131492335	789624	5	148,138,115,149,129,	0,5306,7168,26976,27307,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	131469808	131492387	chr2:131469808-131492387	0	-	131469808	131469808	8553170	4	535,115,149,181,	0,2259,22067,22398,
#Partially deleted in new
chr2	131476092	131482934	chr2:131476092-131482934	3	+	131476199	131482848	789624	5	110,223,149,681,383,	0,2071,3215,3976,6459,
#Partially deleted in new
chr2	131478716	131480338	chr2:131478716-131480338	0	+	131478716	131478716	8553170	3	52,149,270,	0,591,1352,
#Partially deleted in new
chr2	131483957	131492743	chr2:131483957-131492743	0	-	131483957	131483957	8553170	3	261,97,24,	0,7918,8762,
#Partially deleted in new
chr2	131483959	131492422	chr2:131483959-131492422	3	-	131484060	131492376	789624	3	259,149,216,	0,7916,8247,
#Partially deleted in new
chr2	131486423	131491971	chr2:131486423-131491971	0	-	131486423	131486423	8553170	2	138,96,	0,5452,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	131489368	131492376	chr2:131489368-131492376	0	-	131489368	131489368	8553170	2	2656,170,	0,2838,
#Deleted in new
chr2	131491159	131491236	chr2:131491159-131491236	3	-	131491159	131491159	5263520	1	77,	0,
#Partially deleted in new
chr2	131492812	131520421	chr2:131492812-131520421	5	+	131492812	131492812	16724991	19	328,84,87,143,76,109,53,151,131,72,146,91,101,164,206,234,132,129,325,	0,4397,6054,7391,7693,8149,8368,8545,13499,15724,22789,23501,24044,24914,25690,26237,26722,27001,27284,
#Partially deleted in new
chr2	131492812	131521573	chr2:131492812-131521573	7	+	131492812	131492812	16724991	18	328,84,87,143,76,109,53,151,131,72,146,91,101,164,206,234,132,1477,	0,4397,6054,7391,7693,8149,8368,8545,13499,15724,22789,23501,24044,24914,25690,26237,26722,27284,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	131527674	131530180	chr2:131527674-131530180	0	+	131527674	131527674	8553170	2	546,534,	0,1972,
#Partially deleted in new
chr2	131527832	131533666	chr2:131527832-131533666	3	+	131527970	131533398	789624	8	388,45,249,139,193,74,57,398,	0,1814,2746,3831,4756,5031,5180,5436,
#Partially deleted in new
chr2	131527833	131533664	chr2:131527833-131533664	1	+	131527970	131533273	789624	7	387,45,249,139,74,57,396,	0,1813,2745,3830,5030,5179,5435,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	131527855	131530837	chr2:131527855-131530837	0	+	131527970	131528524	789624	4	491,135,45,259,	0,637,1791,2723,
#Partially deleted in new
chr2	131527879	131533666	chr2:131527879-131533666	1	+	131527970	131533398	789624	8	341,45,51,139,193,74,57,398,	0,1767,2897,3784,4709,4984,5133,5389,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	131527910	131529691	chr2:131527910-131529691	0	+	131527910	131527910	8553170	2	717,45,	0,1736,
#Partially deleted in new
chr2	131527933	131529749	chr2:131527933-131529749	0	+	131527933	131527933	8553170	2	413,103,	0,1713,
#Deleted in new
chr2	131529180	131532941	chr2:131529180-131532941	0	+	131529411	131532941	789624	5	511,51,139,72,78,	0,1596,2483,3529,3683,
#Deleted in new
chr2	131535186	131536988	chr2:131535186-131536988	7	-	131535186	131535186	16724991	4	72,57,171,93,	0,839,1381,1709,
#Partially deleted in new
chr2	131591751	131627266	chr2:131591751-131627266	7	+	131591751	131591751	16724991	11	353,115,174,107,134,71,71,45,167,122,1329,	0,5022,5296,8253,9671,12266,17630,19381,19791,32221,34186,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	131602789	131602896	chr2:131602789-131602896	3	+	131602789	131602789	8553170	1	107,	0,
#Deleted in new
chr2	131625956	131628147	chr2:131625956-131628147	7	+	131625956	131625956	16724991	2	200,269,	0,1922,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	131637024	131649615	chr2:131637024-131649615	3	+	131637024	131637024	789624	2	2154,1362,	0,11229,
#Deleted in new
chr2	131646703	131648372	chr2:131646703-131648372	7	-	131646703	131646703	16724991	2	661,454,	0,1215,
#Partially deleted in new
chr2	131722374	131767404	chr2:131722374-131767404	7	+	131722374	131722374	16724991	4	274,198,77,786,	0,28258,29134,44244,
#Partially deleted in new
chr2	131722416	131751584	chr2:131722416-131751584	5	+	131722416	131722416	16724991	6	232,139,120,147,198,133,	0,5655,11416,14123,28216,29035,
#Deleted in new
chr2	131723252	131724279	chr2:131723252-131724279	7	-	131723252	131723252	16724991	1	1027,	0,
#Partially deleted in new
chr2	131733655	131751669	chr2:131733655-131751669	4	+	131733655	131733655	16724991	3	297,198,161,	0,16977,17853,
#Partially deleted in new
chr2	131736551	131750763	chr2:131736551-131750763	4	+	131736551	131736551	16724991	2	135,131,	0,14081,
#Partially deleted in new
chr2	131758030	131767107	chr2:131758030-131767107	4	+	131758030	131758030	16724991	2	507,489,	0,8588,
#Partially deleted in new
chr2	131794960	131801661	chr2:131794960-131801661	3	-	131794960	131794960	8553170	3	786,259,280,	0,5931,6421,
#Deleted in new
chr2	131821986	131822920	chr2:131821986-131822920	7	-	131821986	131821986	16724991	2	99,121,	0,813,
#Deleted in new
chr2	131829800	131832031	chr2:131829800-131832031	3	-	131829800	131829800	8553170	3	395,84,83,	0,471,2148,
#Deleted in new
chr2	131833782	131836532	chr2:131833782-131836532	7	-	131833782	131833782	16724991	5	175,265,203,162,494,	0,423,788,1895,2256,
#Partially deleted in new
chr2	131958276	131965535	chr2:131958276-131965535	3	+	131958276	131958276	8553170	2	61,514,	0,6745,
#Partially deleted in new
chr2	131983936	131994161	chr2:131983936-131994161	3	-	131983936	131983936	8553170	2	407,433,	0,9792,
#Deleted in new
chr2	132037786	132037993	chr2:132037786-132037993	7	-	132037786	132037786	16724991	1	207,	0,
#Deleted in new
chr2	132080289	132080755	chr2:132080289-132080755	7	-	132080289	132080289	16724991	1	466,	0,
#Partially deleted in new
chr2	132087288	132102564	chr2:132087288-132102564	7	+	132087288	132087288	16724991	3	126,75,270,	0,642,15006,
#Partially deleted in new
chr2	132132855	132139429	chr2:132132855-132139429	7	-	132132855	132132855	16724991	4	183,90,68,310,	0,1494,1910,6264,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	132147590	132152738	chr2:132147590-132152738	0	-	132147590	132147590	8553170	3	638,65,550,	0,3321,4598,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	132147590	132257969	chr2:132147590-132257969	0	-	132147590	132147590	789624	5	638,65,107,174,441,	0,3321,7071,9382,109938,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	132147906	132161955	chr2:132147906-132161955	3	-	132148130	132161705	789624	6	322,65,107,174,115,468,	0,3005,6755,9066,9402,13581,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	132147906	132161753	chr2:132147906-132161753	0	-	132147906	132147906	8553170	5	322,65,2485,115,266,	0,3005,6755,9402,13581,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	132147908	132161955	chr2:132147908-132161955	0	-	132153552	132161705	789624	7	320,65,163,107,174,115,468,	0,3003,5623,6753,9064,9400,13579,
#Deleted in new
chr2	132152242	132152349	chr2:132152242-132152349	3	-	132152242	132152242	8553170	1	107,	0,
#Partially deleted in new
chr2	132153509	132161583	chr2:132153509-132161583	0	-	132153509	132153509	8553170	5	185,107,174,115,96,	0,1152,3463,3799,7978,
#Deleted in new
chr2	132253153	132253305	chr2:132253153-132253305	7	-	132253153	132253153	16724991	1	152,	0,
#Deleted in new
chr2	132256965	132257080	chr2:132256965-132257080	3	-	132256965	132256965	5263520	1	115,	0,
#Deleted in new
chr2	132262327	132263042	chr2:132262327-132263042	7	+	132262327	132262327	16724991	1	715,	0,
#Partially deleted in new
chr2	132285794	132294377	chr2:132285794-132294377	3	-	132285794	132285794	8553170	3	98,164,60,	0,3107,8523,
#Partially deleted in new
chr2	132309308	132318736	chr2:132309308-132318736	7	+	132309308	132309308	16724991	3	15,131,1628,	0,3560,7800,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	132345615	132347297	chr2:132345615-132347297	3	-	132345615	132345615	8553170	1	1682,	0,
#Deleted in new
chr2	132352721	132353318	chr2:132352721-132353318	7	+	132352721	132352721	16724991	1	597,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	132406751	132406858	chr2:132406751-132406858	3	-	132406751	132406751	8553170	1	107,	0,
#Partially deleted in new
chr2	132416573	132646559	chr2:132416573-132646559	3	+	132417042	132645606	789624	2	1325,1459,	0,228527,
#Deleted in new
chr2	132417042	132418529	chr2:132417042-132418529	1	+	132417042	132418529	789624	2	856,44,	0,1443,
#Deleted in new
chr2	132488553	132489088	chr2:132488553-132489088	7	-	132488553	132488553	16724991	1	535,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	132523616	132523936	chr2:132523616-132523936	3	+	132523616	132523616	8553170	1	320,	0,
#Partially deleted in new
chr2	132604440	132646554	chr2:132604440-132646554	0	+	132604440	132604440	8553170	3	469,90,1454,	0,1660,40660,
#Partially deleted in new
chr2	132644852	132670205	chr2:132644852-132670205	3	-	132646044	132669932	789624	3	1428,138,325,	0,23547,25028,
#Partially deleted in new
chr2	132645786	132671579	chr2:132645786-132671579	1	-	132646044	132668433	789624	3	494,138,401,	0,22613,25392,
#Partially deleted in new
chr2	132660525	132666990	chr2:132660525-132666990	3	+	132660525	132660525	8553170	2	55,319,	0,6146,
#Partially deleted in new
chr2	132663025	132670200	chr2:132663025-132670200	0	-	132668503	132669932	789624	3	86,138,354,	0,5374,6821,
#Partially deleted in new
chr2	132671798	133568460	chr2:132671798-133568460	3	-	132673288	133517526	789624	20	1507,133,137,315,79,178,3779,183,102,120,39,69,150,88,134,64,74,130,68,245,	0,53828,57017,59938,102017,109253,110141,118224,124829,188693,197137,207049,291921,322353,458179,541917,631238,845659,887251,896417,
#Partially deleted in new
chr2	132671798	132732051	chr2:132671798-132732051	0	-	132673023	132732051	789624	3	1507,137,315,	0,57017,59938,
#Partially deleted in new
chr2	132671799	133568460	chr2:132671799-133568460	1	-	132673288	133517526	789624	21	1506,133,137,315,79,178,3779,183,102,120,39,69,150,88,134,64,69,5,130,68,245,	0,53827,57016,59937,102016,109252,110140,118223,124828,188692,197136,207048,291920,322352,458178,541916,631237,709710,845658,887250,896416,
#Partially deleted in new
chr2	132671799	133568460	chr2:132671799-133568460	1	-	132673288	133517526	789624	19	1506,133,137,315,79,183,102,120,39,69,150,88,134,64,69,5,130,68,245,	0,53827,57016,59937,102016,118223,124828,188692,197136,207048,291920,322352,458178,541916,631237,709710,845658,887250,896416,
#Partially deleted in new
chr2	132671805	132732051	chr2:132671805-132732051	0	-	132673288	132732051	789624	2	1500,315,	0,59931,
#Partially deleted in new
chr2	132673048	133568463	chr2:132673048-133568463	1	-	132673288	133517526	789624	18	257,133,137,315,79,183,102,120,39,69,150,88,134,64,74,130,68,248,	0,52578,55767,58688,100767,116974,123579,187443,195887,205799,290671,321103,456929,540667,629988,844409,886001,895167,
#Partially deleted in new
chr2	132731948	132782023	chr2:132731948-132782023	0	-	132731948	132731948	8553170	3	103,178,84,	0,49103,49991,
#Deleted in new
chr2	132911095	132911261	chr2:132911095-132911261	7	-	132911095	132911095	16724991	1	166,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	132915556	132931494	chr2:132915556-132931494	3	+	132915556	132915556	789624	2	95,1616,	0,14322,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	133117003	133119052	chr2:133117003-133119052	3	+	133117003	133117003	8553170	1	2049,	0,
#Partially deleted in new
chr2	133121968	133517513	chr2:133121968-133517513	0	-	133123782	133517513	789624	5	1830,134,64,74,56,	0,8009,91747,181068,395489,
#Partially deleted in new
chr2	133213715	133527185	chr2:133213715-133527185	0	-	133213715	133517526	789624	4	64,74,130,120,	0,89321,303742,313350,
#Partially deleted in new
chr2	133264967	133269010	chr2:133264967-133269010	1	+	133264967	133264967	8553170	4	135,152,87,95,	0,2305,3388,3948,
#Partially deleted in new
chr2	133266194	133284762	chr2:133266194-133284762	3	+	133266194	133266194	789624	5	102,152,87,126,68,	0,1078,2161,2721,18500,
#Partially deleted in new
chr2	133266241	133269041	chr2:133266241-133269041	0	+	133266241	133266241	8553170	4	195,152,87,126,	0,1031,2114,2674,
#Deleted in new
chr2	133333828	133333930	chr2:133333828-133333930	3	+	133333828	133333828	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	133391108	133391398	chr2:133391108-133391398	3	-	133391108	133391108	8553170	1	290,	0,
#Deleted in new
chr2	133431665	133433897	chr2:133431665-133433897	3	-	133431665	133431665	8553170	2	152,402,	0,1830,
#Deleted in new
chr2	133554314	133558227	chr2:133554314-133558227	3	+	133554314	133554314	8553170	3	118,96,201,	0,2437,3712,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	133596090	133596399	chr2:133596090-133596399	3	+	133596090	133596090	8553170	1	309,	0,
#Partially deleted in new
chr2	134119982	134254644	chr2:134119982-134254644	0	+	134119982	134119982	8553170	3	309,124,383,	0,133112,134279,
#Partially deleted in new
chr2	134119982	134254606	chr2:134119982-134254606	0	+	134119982	134119982	8553170	2	309,342,	0,134282,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	134120181	134454621	chr2:134120181-134454621	3	+	134254403	134448847	789624	17	110,383,165,77,90,72,162,170,135,134,134,150,147,117,75,158,5973,	0,134080,150204,197347,198468,216035,218077,221408,224748,229623,242093,282806,292687,302621,308183,321576,328467,
#Deleted in new
chr2	134127124	134127192	chr2:134127124-134127192	3	+	134127124	134127124	5263520	1	68,	0,
#Deleted in new
chr2	134231194	134231312	chr2:134231194-134231312	7	+	134231194	134231194	16724991	1	118,	0,
#Deleted in new
chr2	134253103	134254514	chr2:134253103-134254514	0	+	134253103	134253103	8553170	2	115,250,	0,1161,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	134254258	134454620	chr2:134254258-134454620	1	+	134254403	134448847	789624	16	386,165,77,90,72,162,170,135,134,134,150,147,117,75,158,5972,	0,16127,63270,64391,81958,84000,87331,90671,95546,108016,148729,158610,168544,174106,187499,194390,
#Deleted in new
chr2	134319653	134320078	chr2:134319653-134320078	7	-	134319653	134319653	16724991	1	425,	0,
#Partially deleted in new
chr2	134455758	134719000	chr2:134455758-134719000	3	-	134456715	134718935	789624	8	1018,142,112,97,92,44,120,267,	0,2273,10355,47142,94811,96289,257441,262975,
#Partially deleted in new
chr2	134455759	134459274	chr2:134455759-134459274	0	-	134455759	134455759	8553170	2	1017,1243,	0,2272,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	134455763	134470036	chr2:134455763-134470036	0	-	134455763	134455763	8553170	3	1013,142,3923,	0,2268,10350,
#Deleted in new
chr2	134797168	134797879	chr2:134797168-134797879	7	+	134797168	134797168	16724991	1	711,	0,
#Deleted in new
chr2	134816361	134816589	chr2:134816361-134816589	7	+	134816361	134816361	16724991	1	228,	0,
#Partially deleted in new
chr2	134838546	134902034	chr2:134838546-134902034	3	+	134838682	134901860	0	10	193,45,97,50,237,94,96,173,99,237,	0,6686,20714,23422,24848,29032,32418,33922,59794,63251,
#Partially deleted in new
chr2	134838615	134873661	chr2:134838615-134873661	0	+	134838615	134838615	8553170	8	124,45,97,50,237,94,96,1193,	0,6617,20645,23353,24779,28963,32349,33853,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	134838617	134902034	chr2:134838617-134902034	1	+	134859282	134901860	0	10	122,107,45,97,237,94,96,173,99,237,	0,5747,6615,20643,24777,28961,32347,33851,59723,63180,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	134844422	134859694	chr2:134844422-134859694	0	+	134844422	134844422	8553170	3	49,45,434,	0,810,14838,
#Partially deleted in new
chr2	134857819	134857873	chr2:134857819-134857873	3	+	134857819	134857819	5263520	1	54,	0,
#Partially deleted in new
chr2	134867317	134918678	chr2:134867317-134918678	0	-	134867317	134867317	8553170	3	422,98,116,	0,1626,51245,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	134867432	134918710	chr2:134867432-134918710	3	-	134867432	134867432	8553170	4	307,98,124,148,	0,1511,10087,51130,
#Partially deleted in new
chr2	134918234	134956843	chr2:134918234-134956843	0	+	134918854	134945917	789624	10	778,82,129,61,63,87,365,164,71,3614,	0,1575,18606,20767,24377,27654,27866,29501,34406,34995,
#Partially deleted in new
chr2	134918240	134953325	chr2:134918240-134953325	0	+	134939046	134953325	789624	7	96,129,61,46,164,71,96,	0,18600,20761,27860,29495,34400,34989,
#Partially deleted in new
chr2	134918821	134954799	chr2:134918821-134954799	0	+	134918854	134945917	789624	11	191,82,129,61,63,87,46,164,71,1150,319,	0,988,18019,20180,23790,27067,27279,28914,33819,34408,35659,
#Partially deleted in new
chr2	134918824	134959342	chr2:134918824-134959342	3	+	134918854	134954648	0	9	188,82,129,61,63,46,164,71,6113,	0,985,18016,20177,23787,27276,28911,33816,34405,
#Partially deleted in new
chr2	134918824	134957017	chr2:134918824-134957017	1	+	134918854	134954548	0	10	188,82,129,61,63,46,164,71,1150,2537,	0,985,18016,20177,23787,27276,28911,33816,34405,35656,
#Partially deleted in new
chr2	134918836	134942769	chr2:134918836-134942769	0	+	134918836	134918836	8553170	5	176,82,129,61,158,	0,973,18004,20165,23775,
#Deleted in new
chr2	134918842	134920362	chr2:134918842-134920362	0	+	134918842	134918842	8553170	2	170,553,	0,967,
#Partially deleted in new
chr2	134918846	134946214	chr2:134918846-134946214	0	+	134918854	134945815	789624	7	166,82,129,61,63,196,114,	0,963,17994,20155,23765,26940,27254,
#Partially deleted in new
chr2	134947729	134954838	chr2:134947729-134954838	0	+	134947729	134954648	789624	4	170,71,39,358,	0,4911,5500,6751,
#Partially deleted in new
chr2	134947825	134953198	chr2:134947825-134953198	0	+	134947825	134952768	789624	2	74,558,	0,4815,
#Partially deleted in new
chr2	134964490	135047445	chr2:134964490-135047445	3	-	134964849	135024647	789624	13	426,698,150,2454,44,260,79,97,116,116,189,140,261,	0,16330,19185,21309,27046,34247,35446,40944,57224,60135,65821,75872,82694,
#Partially deleted in new
chr2	134964498	135024678	chr2:134964498-135024678	1	-	134964849	135024647	789624	10	418,698,150,2454,44,260,79,97,116,53,	0,16322,19177,21301,27038,34239,35438,40936,57216,60127,
#Partially deleted in new
chr2	134964498	135024678	chr2:134964498-135024678	1	-	134964849	135024647	789624	8	418,698,44,260,79,97,116,53,	0,16322,27038,34239,35438,40936,57216,60127,
#Partially deleted in new
chr2	134964809	135024678	chr2:134964809-135024678	1	-	134964849	135024647	789624	8	107,698,150,2454,44,97,116,53,	0,16011,18866,20990,26727,40625,56905,59816,
#Partially deleted in new
chr2	134964809	135024678	chr2:134964809-135024678	1	-	134964849	135024647	789624	9	107,698,150,44,260,79,97,116,53,	0,16011,18866,26727,33928,35127,40625,56905,59816,
#Partially deleted in new
chr2	134964809	135024678	chr2:134964809-135024678	1	-	134964849	135024647	789624	9	107,586,118,44,260,79,97,116,53,	0,16011,18898,26727,33928,35127,40625,56905,59816,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	134980713	134983479	chr2:134980713-134983479	0	-	134980713	134980713	8553170	2	805,300,	0,2466,
#Partially deleted in new
chr2	134980713	135023649	chr2:134980713-135023649	0	-	134980713	134980713	8553170	10	805,152,150,2454,44,260,79,97,116,193,	0,2466,2962,5086,10823,18024,19223,24721,41001,42743,
#Partially deleted in new
chr2	134980715	134987041	chr2:134980715-134987041	0	-	134980816	134987041	789624	3	803,150,1242,	0,2960,5084,
#Partially deleted in new
chr2	134985855	135047447	chr2:134985855-135047447	0	-	134985855	134999965	789624	7	2398,44,260,79,97,140,263,	0,5681,12882,14081,19579,54507,61329,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	134991340	135047468	chr2:134991340-135047468	0	-	134991340	134991340	8553170	8	240,260,79,97,116,189,140,284,	0,7397,8596,14094,30374,38971,49022,55844,
#Partially deleted in new
chr2	134998920	135023376	chr2:134998920-135023376	0	-	134998920	134998920	8553170	5	77,79,97,116,168,	0,1016,6514,22794,24288,
#Partially deleted in new
chr2	135005520	135047458	chr2:135005520-135047458	0	-	135005520	135021768	789624	4	11,116,140,274,	0,16194,34842,41664,
#Partially deleted in new
chr2	135030351	135047443	chr2:135030351-135047443	0	-	135030351	135030351	8553170	3	149,196,259,	0,10011,16833,
#Partially deleted in new
chr2	135052264	135170706	chr2:135052264-135170706	3	+	135052307	135168781	789624	24	61,56,76,133,79,120,166,100,82,69,74,93,170,90,173,55,369,138,228,97,104,116,103,2162,	0,165,5746,38733,41350,60886,62951,68554,71900,73916,74318,77730,78287,80630,81596,83000,83299,98104,101384,110290,110483,110721,112329,116280,
#Partially deleted in new
chr2	135052297	135169989	chr2:135052297-135169989	1	+	135052307	135168781	789624	25	28,56,76,133,79,120,166,100,82,69,74,93,170,90,173,55,369,138,228,97,104,116,103,21,1445,	0,132,5713,38700,41317,60853,62918,68521,71867,73883,74285,77697,78254,80597,81563,82967,83266,98071,101351,110257,110450,110688,112296,115395,116247,
#Partially deleted in new
chr2	135052298	135059066	chr2:135052298-135059066	1	+	135052307	135058113	789624	3	27,56,1056,	0,131,5712,
#Partially deleted in new
chr2	135124079	135130705	chr2:135124079-135130705	0	+	135124079	135124079	8553170	5	167,69,74,93,154,	0,2101,2503,5915,6472,
#Deleted in new
chr2	135136627	135136755	chr2:135136627-135136755	3	+	135136627	135136627	5263520	1	128,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	135136915	135238861	chr2:135136915-135238861	0	-	135136915	135136915	8553170	14	432,134,213,12,87,132,403,111,143,102,92,198,415,98,	0,15945,25499,28227,63438,65916,70518,71952,80549,82161,87510,90902,93597,101848,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	135136916	135230948	chr2:135136916-135230948	1	-	135162459	135230861	0	13	431,134,213,12,87,132,403,111,143,102,92,198,436,	0,15944,25498,28226,63437,65915,70517,71951,80548,82160,87509,90901,93596,
#Deleted in new
chr2	135168547	135169977	chr2:135168547-135169977	0	+	135168547	135168547	8553170	2	202,244,	0,1186,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr2	135196968	135530731	chr2:135196968-135530731	1	-	135200341	135504489	0	21	3472,132,403,111,143,102,92,198,415,153,180,120,120,117,172,86,232,179,19,168,206,	0,5863,10465,11899,20496,22108,27457,30849,33544,68565,71993,74799,78667,116520,118390,148581,153015,156481,193833,307360,333557,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr2	135196973	135530730	chr2:135196973-135530730	1	-	135200341	135268985	789624	22	3467,132,403,111,143,102,92,204,415,153,180,95,120,120,117,172,86,232,179,19,168,233,	0,5858,10460,11894,20491,22103,27452,30838,33539,68560,71988,74327,74794,78662,116515,118385,148576,153010,156476,193828,307355,333524,
#Partially deleted in new
chr2	135199652	135531236	chr2:135199652-135531236	3	-	135200341	135504489	0	21	788,132,403,111,143,102,92,204,415,153,180,120,120,117,172,86,232,179,19,168,110,	0,3179,7781,9215,17812,19424,24773,28159,30860,65881,69309,72115,75983,113836,115706,145897,150331,153797,191149,304676,331474,
#Partially deleted in new
chr2	135199662	135530612	chr2:135199662-135530612	0	-	135271314	135504489	789624	22	778,132,403,111,143,102,92,198,415,153,180,95,120,120,117,172,86,232,179,19,168,115,	0,3169,7771,9205,17802,19414,24763,28155,30850,65871,69299,71638,72105,75973,113826,115696,145887,150321,153787,191139,304666,330835,
#Partially deleted in new
chr2	135202437	135207518	chr2:135202437-135207518	0	-	135202437	135202437	8553170	2	526,85,	0,4996,
#Partially deleted in new
chr2	135224449	135228312	chr2:135224449-135228312	0	-	135224449	135224449	8553170	2	68,501,	0,3362,
#Partially deleted in new
chr2	135269066	135531199	chr2:135269066-135531199	0	-	135269066	135269066	8553170	10	75,95,120,120,117,172,86,232,179,73,	0,2234,2701,6569,44422,46292,76483,80917,84383,262060,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	135345135	135353628	chr2:135345135-135353628	0	-	135345135	135345135	8553170	4	326,86,232,179,	0,414,4848,8314,
#Partially deleted in new
chr2	135353320	135530576	chr2:135353320-135530576	0	-	135353320	135353320	8553170	4	308,19,168,51,	0,37481,151008,177205,
#Deleted in new
chr2	135510545	135511943	chr2:135510545-135511943	7	-	135510545	135510545	16724991	1	1398,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	135531454	135602670	chr2:135531454-135602670	0	+	135531454	135531454	8553170	3	179,189,171,	0,34282,71045,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	135531472	135606676	chr2:135531472-135606676	0	+	135531472	135531472	8553170	3	161,209,1871,	0,71027,73333,
#Partially deleted in new
chr2	135531500	135725266	chr2:135531500-135725266	1	+	135604845	135724292	789624	23	133,209,211,115,79,60,141,109,96,38,51,227,149,303,124,155,152,104,173,145,83,85,1330,	0,70999,73305,89993,91153,100217,100360,104389,104587,107117,107238,107395,113878,120229,129769,143831,148672,177932,178558,184049,190423,190968,192436,
#Partially deleted in new
chr2	135531512	135725270	chr2:135531512-135725270	3	+	135604845	135724292	789624	26	121,209,211,42,90,115,79,60,141,109,96,38,51,227,255,149,300,124,155,152,104,173,145,83,85,1334,	0,70987,73293,84639,85155,89981,91141,100205,100348,104377,104575,107105,107226,107383,110023,113866,120220,129757,143819,148660,177920,178546,184037,190411,190956,192424,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	135531516	135604820	chr2:135531516-135604820	0	+	135602573	135604820	789624	5	117,189,52,209,15,	0,34220,37241,70983,73289,
#Partially deleted in new
chr2	135531526	135632001	chr2:135531526-135632001	0	+	135531526	135531526	8553170	5	107,115,79,60,141,	0,89967,91127,100191,100334,
#Partially deleted in new
chr2	135586249	135725268	chr2:135586249-135725268	1	+	135602573	135724292	789624	23	257,209,115,79,60,141,109,96,38,51,227,255,149,303,124,155,152,104,173,145,83,85,1332,	0,16250,35244,36404,45468,45611,49640,49838,52368,52489,52646,55286,59129,65480,75020,89082,93923,123183,123809,129300,135674,136219,137687,
#Partially deleted in new
chr2	135586322	135725268	chr2:135586322-135725268	1	+	135604845	135724292	789624	23	184,209,211,115,79,60,141,109,96,38,51,227,149,303,124,155,152,104,173,145,83,85,1332,	0,16177,18483,35171,36331,45395,45538,49567,49765,52295,52416,52573,59056,65407,74947,89009,93850,123110,123736,129227,135601,136146,137614,
#Partially deleted in new
chr2	135586351	135631743	chr2:135586351-135631743	0	+	135604845	135631743	789624	4	155,209,211,26,	0,16148,18454,45366,
#Partially deleted in new
chr2	135586436	135724343	chr2:135586436-135724343	1	+	135604845	135724292	789624	26	70,209,211,42,90,115,79,60,141,109,96,38,51,227,255,149,303,124,155,152,104,173,145,83,85,407,	0,16063,18369,29715,30231,35057,36217,45281,45424,49453,49651,52181,52302,52459,55099,58942,65293,74833,88895,93736,122996,123622,129113,135487,136032,137500,
#Partially deleted in new
chr2	135604855	135636183	chr2:135604855-135636183	0	+	135604855	135636183	789624	8	161,90,115,79,60,141,109,96,	0,11812,16638,17798,26862,27005,31034,31232,
#Partially deleted in new
chr2	135621511	135631938	chr2:135621511-135631938	0	+	135621511	135621511	8553170	3	97,60,78,	0,10206,10349,
#Partially deleted in new
chr2	135633711	135639114	chr2:135633711-135639114	0	+	135633711	135633711	8553170	6	117,109,96,38,51,219,	0,2178,2376,4906,5027,5184,
#Partially deleted in new
chr2	135638640	135651774	chr2:135638640-135651774	0	+	135638640	135651774	789624	6	15,51,227,69,149,45,	0,98,255,2895,6738,13089,
#Partially deleted in new
chr2	135638732	135725265	chr2:135638732-135725265	0	+	135638732	135724292	789624	15	57,227,255,149,102,303,124,155,152,104,173,145,83,85,1329,	0,163,2803,6646,11169,12997,22537,36599,41440,70700,71326,76817,83191,83736,85204,
#Partially deleted in new
chr2	135638898	135651940	chr2:135638898-135651940	0	+	135638898	135651940	789624	3	224,149,208,	0,6480,12834,
#Partially deleted in new
chr2	135645232	135652021	chr2:135645232-135652021	0	+	135645232	135645232	8553170	2	295,292,	0,6497,
#Deleted in new
chr2	135656476	135656579	chr2:135656476-135656579	3	-	135656476	135656476	8553170	1	103,	0,
#Deleted in new
chr2	135665396	135665478	chr2:135665396-135665478	3	+	135665396	135665396	5263520	1	82,	0,
#Partially deleted in new
chr2	135675397	135722537	chr2:135675397-135722537	0	+	135675397	135722537	789624	6	89,152,104,173,83,69,	0,4775,34035,34661,46526,47071,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	135721508	135722547	chr2:135721508-135722547	0	+	135721508	135721508	8553170	2	498,79,	0,960,
#Partially deleted in new
chr2	135741618	135785055	chr2:135741618-135785055	3	+	135741929	135782887	0	13	393,103,29,119,175,94,55,165,128,103,132,203,2307,	0,6648,11920,12540,13898,20199,28150,28952,30801,34630,37329,38564,41130,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	135741733	135754188	chr2:135741733-135754188	0	+	135741929	135754188	789624	5	278,108,103,29,30,	0,5924,6533,11805,12425,
#Partially deleted in new
chr2	135741785	135761881	chr2:135741785-135761881	0	+	135741929	135755529	789624	4	226,103,175,64,	0,6481,13731,20032,
#Partially deleted in new
chr2	135741867	135761911	chr2:135741867-135761911	0	+	135741929	135753641	789624	5	144,103,739,175,94,	0,6399,11671,13649,19950,
#Partially deleted in new
chr2	135742522	135748369	chr2:135742522-135748369	0	+	135742522	135742522	8553170	2	231,103,	0,5744,
#Partially deleted in new
chr2	135748110	135755658	chr2:135748110-135755658	0	+	135748110	135748110	8553170	4	259,29,119,142,	0,5428,6048,7406,
#Partially deleted in new
chr2	135754151	135785055	chr2:135754151-135785055	0	+	135754151	135754151	8553170	9	126,175,55,165,128,103,132,203,2307,	0,1365,15617,16419,18268,22097,24796,26031,28597,
#Partially deleted in new
chr2	135772446	135780221	chr2:135772446-135780221	0	+	135772446	135772446	8553170	4	101,103,132,59,	0,3802,6501,7716,
#Partially deleted in new
chr2	135787839	135837180	chr2:135787839-135837180	3	-	135788323	135837169	789624	17	705,228,224,135,110,203,199,291,269,1551,646,721,79,103,84,80,651,	0,1731,2818,6801,10189,12767,16090,16927,19288,20603,24471,29501,34180,36061,41753,45271,48690,
#Partially deleted in new
chr2	135794336	135812959	chr2:135794336-135812959	0	-	135798085	135812959	789624	7	439,110,199,291,269,1551,649,	0,3692,9593,10430,12791,14106,17974,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	135810168	135810279	chr2:135810168-135810279	3	-	135810168	135810168	8553170	1	111,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	135820190	135823087	chr2:135820190-135823087	3	+	135820190	135820190	789624	2	449,1413,	0,1484,
#Partially deleted in new
chr2	135839625	135876426	chr2:135839625-135876426	3	-	135840834	135876365	0	17	1326,140,156,136,162,129,156,108,142,142,151,146,166,250,111,147,168,	0,4919,6611,8427,11776,13161,17102,18271,19675,22981,25387,26506,26937,28985,30625,33071,36633,
#Partially deleted in new
chr2	135844607	135865051	chr2:135844607-135865051	0	-	135844607	135844607	8553170	6	77,156,136,162,142,39,	0,1629,3445,6794,17999,20405,
#Partially deleted in new
chr2	135848155	135851945	chr2:135848155-135851945	0	-	135848155	135848155	8553170	2	33,544,	0,3246,
#Partially deleted in new
chr2	135897954	135898978	chr2:135897954-135898978	7	-	135897954	135897954	16724991	1	1024,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	135906676	135985684	chr2:135906676-135985684	3	-	135907315	135985468	0	16	731,72,112,81,43,147,148,135,112,60,81,103,103,93,58,282,	0,4462,4705,5809,7792,9549,13776,16107,17710,26106,27233,36701,54719,72597,76720,78726,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	135906823	135911617	chr2:135906823-135911617	0	-	135906823	135906823	8553170	3	584,72,236,	0,4315,4558,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	135907243	135914866	chr2:135907243-135914866	0	-	135907243	135907243	8553170	5	164,72,112,81,398,	0,3895,4138,5242,7225,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	135907259	135920553	chr2:135907259-135920553	0	-	135907315	135920553	789624	6	148,72,112,43,147,101,	0,3879,4122,7209,8966,13193,
#Partially deleted in new
chr2	135910847	135912559	chr2:135910847-135912559	0	-	135910847	135910847	8553170	3	363,112,74,	0,534,1638,
#Partially deleted in new
chr2	135924417	135985884	chr2:135924417-135985884	0	-	135924417	135983421	789624	8	81,60,81,103,103,93,58,72,	0,8365,9492,18960,36978,54856,58979,61395,
#Partially deleted in new
chr2	135924436	135986100	chr2:135924436-135986100	0	-	135924436	135983421	789624	8	62,60,81,103,103,93,58,171,	0,8346,9473,18941,36959,54837,58960,61493,
#Partially deleted in new
chr2	135933908	135985897	chr2:135933908-135985897	0	-	135933908	135983421	789624	6	82,103,103,93,58,104,	0,9469,27487,45365,49488,51885,
#Partially deleted in new
chr2	135943178	135985563	chr2:135943178-135985563	0	-	135943356	135985563	789624	5	302,103,93,58,161,	0,18217,36095,40218,42224,
#Partially deleted in new
chr2	135943385	135980551	chr2:135943385-135980551	0	-	135943385	135943385	8553170	4	95,103,93,121,	0,18010,35888,37045,
#Partially deleted in new
chr2	135978986	135983447	chr2:135978986-135983447	0	-	135978986	135978986	8553170	2	380,51,	0,4410,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	135985175	136016529	chr2:135985175-136016529	3	+	135985175	135985175	8553170	4	341,152,207,72,	0,13511,23691,31282,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	135985218	136007472	chr2:135985218-136007472	1	+	135985218	135985218	789624	4	298,152,41,277,	0,13468,15220,21977,
#Partially deleted in new
chr2	135985333	135986136	chr2:135985333-135986136	1	+	135985333	135985333	8553170	2	183,259,	0,544,
#Partially deleted in new
chr2	135985473	135999131	chr2:135985473-135999131	1	+	135985473	135985473	8553170	2	43,445,	0,13213,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	135993831	136000381	chr2:135993831-136000381	1	+	135993831	135993831	8553170	5	46,217,120,152,125,	0,2360,3291,4855,6425,
#Partially deleted in new
chr2	135993842	136000434	chr2:135993842-136000434	0	+	135993842	135993842	8553170	3	35,152,178,	0,4844,6414,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	135993845	136007757	chr2:135993845-136007757	1	+	135993845	135993845	8553170	6	140,217,152,223,126,562,	0,2346,4841,6411,8155,13350,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	135993845	136007319	chr2:135993845-136007319	0	+	135993845	135993845	8553170	5	140,217,152,223,124,	0,2346,4841,6411,13350,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	135993847	136007319	chr2:135993847-136007319	0	+	135993847	135993847	8553170	5	30,217,152,223,124,	0,2344,4839,6409,13348,
#Partially deleted in new
chr2	135993852	135999273	chr2:135993852-135999273	1	+	135993852	135993852	8553170	2	133,587,	0,4834,
#Partially deleted in new
chr2	135993884	136007251	chr2:135993884-136007251	1	+	135993884	135993884	8553170	4	101,152,223,56,	0,4802,6372,13311,
#Partially deleted in new
chr2	135993898	136001023	chr2:135993898-136001023	1	+	135993898	135993898	8553170	3	87,152,585,	0,4788,6540,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	135999647	136007757	chr2:135999647-136007757	0	+	135999647	135999647	8553170	2	832,562,	0,7548,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	136000412	136016517	chr2:136000412-136016517	0	+	136000412	136000412	8553170	6	67,388,207,133,107,60,	0,6783,8454,12437,14243,16045,
#Partially deleted in new
chr2	136000412	136016698	chr2:136000412-136016698	0	+	136000412	136000412	8553170	5	67,133,107,80,241,	0,12437,14243,15854,16045,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	136000412	136016625	chr2:136000412-136016625	0	+	136000412	136000412	8553170	5	67,207,133,107,168,	0,8454,12437,14243,16045,
#Partially deleted in new
chr2	136000412	136016663	chr2:136000412-136016663	0	+	136000412	136000412	8553170	4	67,133,107,206,	0,12437,14243,16045,
#Partially deleted in new
chr2	136000412	136017312	chr2:136000412-136017312	0	+	136000412	136000412	8553170	3	67,133,855,	0,12437,16045,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	136000412	136007712	chr2:136000412-136007712	0	+	136000412	136000412	8553170	4	67,123,80,517,	0,2832,3330,6783,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	136000412	136016956	chr2:136000412-136016956	0	+	136000412	136000412	8553170	4	67,207,133,499,	0,8454,12437,16045,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	136000412	136022318	chr2:136000412-136022318	0	+	136000412	136000412	8553170	5	67,207,133,107,249,	0,8454,12437,14243,21657,
#Partially deleted in new
chr2	136000412	136005236	chr2:136000412-136005236	0	+	136000412	136000412	8553170	2	67,244,	0,4580,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	136000420	136022593	chr2:136000420-136022593	0	+	136000420	136000420	8553170	4	59,207,133,524,	0,8446,12429,21649,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	136000428	136007748	chr2:136000428-136007748	0	+	136000428	136000428	8553170	3	51,123,553,	0,2816,6767,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	136008871	136016465	chr2:136008871-136016465	1	+	136008871	136008871	8553170	5	202,133,107,80,8,	0,3978,5784,7395,7586,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	136008902	136016808	chr2:136008902-136016808	1	+	136008902	136008902	8553170	4	171,133,86,351,	0,3947,5146,7555,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	136009042	136016837	chr2:136009042-136016837	1	+	136009042	136009042	8553170	3	31,133,380,	0,3807,7415,
#Partially deleted in new
chr2	136012464	136016497	chr2:136012464-136016497	1	+	136012464	136012464	8553170	2	518,40,	0,3993,
#Partially deleted in new
chr2	136012849	136016684	chr2:136012849-136016684	1	+	136012849	136012849	8553170	5	133,86,107,80,227,	0,1199,1806,3417,3608,
#Deleted in new
chr2	136077891	136078513	chr2:136077891-136078513	3	+	136077891	136077891	8553170	2	103,366,	0,256,
#Deleted in new
chr2	136114348	136116243	chr2:136114348-136116243	3	-	136114868	136115939	0	1	1895,	0,
#Deleted in new
chr2	136114350	136118165	chr2:136114350-136118165	1	-	136114868	136118060	0	2	1562,120,	0,3695,
#Deleted in new
chr2	136114636	136117737	chr2:136114636-136117737	0	-	136114636	136114636	8553170	2	1276,209,	0,2892,
#Deleted in new
chr2	136199113	136200503	chr2:136199113-136200503	7	-	136199113	136199113	16724991	1	1390,	0,
#Deleted in new
chr2	136230752	136233245	chr2:136230752-136233245	3	+	136230752	136230752	8553170	1	2493,	0,
#Deleted in new
chr2	136329440	136329913	chr2:136329440-136329913	7	-	136329440	136329440	16724991	1	473,	0,
#Deleted in new
chr2	136390331	136390669	chr2:136390331-136390669	3	+	136390331	136390331	8553170	1	338,	0,
#Partially deleted in new
chr2	136544711	136545542	chr2:136544711-136545542	7	+	136544711	136544711	16724991	2	258,269,	0,562,
#Partially deleted in new
chr2	136765544	137677717	chr2:136765544-137677717	3	+	136882178	137676605	789624	28	143,174,811,249,170,156,198,192,235,116,130,104,195,264,179,134,151,142,116,118,146,160,174,96,83,193,88,1194,	0,116599,290875,329328,349579,394668,405196,465499,467354,476912,506988,510378,640068,646064,685300,797676,806861,850630,852847,855064,876943,889956,891251,891520,894119,897838,902229,910979,
#Partially deleted in new
chr2	136765544	137056515	chr2:136765544-137056515	0	+	136882178	136906461	789624	4	143,174,119,96,	0,116599,140903,290875,
#Partially deleted in new
chr2	136882178	137677717	chr2:136882178-137677717	1	+	136882178	137676605	789624	27	139,811,249,170,156,198,192,235,116,130,104,195,264,180,139,151,142,116,118,146,160,174,96,83,193,88,1194,	0,174241,212694,232945,278034,288562,348865,350720,360278,390354,393744,523434,529430,568666,681037,690227,733996,736213,738430,760309,773322,774617,774886,777485,781204,785595,794345,
#Partially deleted in new
chr2	136990891	137677717	chr2:136990891-137677717	1	+	136990891	137676605	789624	28	46,811,249,170,156,198,192,235,116,130,104,195,264,180,2,137,151,142,116,118,146,160,174,96,83,193,88,1194,	0,65528,103981,124232,169321,179849,240152,242007,251565,281641,285031,414721,420717,459953,572321,572326,581514,625283,627500,629717,651596,664609,665904,666173,668772,672491,676882,685632,
#Partially deleted in new
chr2	137155959	137170915	chr2:137155959-137170915	0	+	137155959	137155959	8553170	3	232,156,175,	0,4253,14781,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	137512097	137512210	chr2:137512097-137512210	7	-	137512097	137512097	16724991	1	113,	0,
#Partially deleted in new
chr2	137642242	137655640	chr2:137642242-137655640	0	+	137642242	137642242	8553170	2	391,140,	0,13258,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	137715331	137715440	chr2:137715331-137715440	3	+	137715331	137715331	8553170	1	109,	0,
#Partially deleted in new
chr2	137964019	138014253	chr2:137964019-138014253	1	+	137964491	138014130	0	7	138,147,53,108,131,94,479,	0,462,6145,36898,38044,41112,49755,
#Partially deleted in new
chr2	137964309	138016364	chr2:137964309-138016364	3	+	137964491	138014130	0	6	319,53,108,131,94,2590,	0,5855,36608,37754,40822,49465,
#Partially deleted in new
chr2	137964309	137981678	chr2:137964309-137981678	1	+	137964491	137981406	0	3	319,53,463,	0,5855,16906,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	137964472	137967444	chr2:137964472-137967444	1	+	137964491	137967115	0	2	156,348,	0,2624,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	137964478	137991934	chr2:137964478-137991934	0	+	137964491	137967115	0	5	150,290,131,53,119,	0,2618,3032,5686,27337,
#Partially deleted in new
chr2	137964479	138002374	chr2:137964479-138002374	0	+	137964479	137964479	8553170	5	149,53,108,131,91,	0,5685,36438,37584,37804,
#Partially deleted in new
chr2	137964506	138013994	chr2:137964506-138013994	0	+	137964506	137964506	8553170	5	122,108,131,94,220,	0,36411,37557,40625,49268,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	137964513	137988735	chr2:137964513-137988735	0	+	137964513	137964513	8553170	3	115,53,171,	0,5651,24051,
#Partially deleted in new
chr2	138101883	138105905	chr2:138101883-138105905	3	+	138101883	138101883	789624	3	38,86,429,	0,2251,3593,
#Deleted in new
chr2	138278573	138279210	chr2:138278573-138279210	7	+	138278573	138278573	16724991	1	637,	0,
#Partially deleted in new
chr2	138288028	138288793	chr2:138288028-138288793	7	-	138288028	138288028	16724991	1	765,	0,
#Deleted in new
chr2	138307318	138307970	chr2:138307318-138307970	7	+	138307318	138307318	16724991	1	652,	0,
#Deleted in new
chr2	138412065	138413318	chr2:138412065-138413318	7	-	138412065	138412065	16724991	1	1253,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	138418283	138501698	chr2:138418283-138501698	3	-	138418283	138418283	8553170	4	202,220,126,380,	0,27964,82471,83035,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	138434374	138501674	chr2:138434374-138501674	1	-	138434374	138434374	8553170	5	167,141,77,126,356,	0,2098,42795,66380,66944,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	138470655	138473932	chr2:138470655-138473932	3	+	138470655	138470655	8553170	3	93,292,441,	0,384,2836,
#Partially deleted in new
chr2	138501800	138573547	chr2:138501800-138573547	3	+	138550216	138569080	789624	11	319,138,122,152,128,178,56,123,143,54,4612,	0,48356,48682,49102,50753,57221,57481,59004,62907,63139,67135,
#Partially deleted in new
chr2	138501931	138552582	chr2:138501931-138552582	0	+	138550216	138550992	789624	5	188,138,122,81,29,	0,48225,48551,49042,50622,
#Partially deleted in new
chr2	138550156	138569130	chr2:138550156-138569130	0	+	138550216	138554531	789624	11	138,122,152,128,97,178,56,123,143,54,195,	0,326,746,2397,4282,8865,9125,10648,14551,14783,18779,
#Deleted in new
chr2	138564387	138565019	chr2:138564387-138565019	0	+	138564387	138564387	8553170	2	463,80,	0,552,
#Deleted in new
chr2	138569089	138574458	chr2:138569089-138574458	3	+	138569089	138569089	8553170	2	137,607,	0,4762,
#Deleted in new
chr2	138569091	138571074	chr2:138569091-138571074	0	+	138569091	138569091	8553170	2	135,307,	0,1676,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	138599662	138602426	chr2:138599662-138602426	3	-	138599662	138599662	8553170	1	2764,	0,
#Partially deleted in new
chr2	138604509	138613167	chr2:138604509-138613167	3	+	138604509	138604509	8553170	2	50,630,	0,8028,
#Partially deleted in new
chr2	138670771	138780348	chr2:138670771-138780348	3	-	138670921	138780241	789624	2	894,158,	0,109419,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	138863596	138863895	chr2:138863596-138863895	3	-	138863596	138863596	8553170	1	299,	0,
#Partially deleted in new
chr2	138897150	138898098	chr2:138897150-138898098	7	+	138897150	138897150	16724991	1	948,	0,
#Partially deleted in new
chr2	138901432	138902747	chr2:138901432-138902747	7	-	138901432	138901432	16724991	1	1315,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	139366164	139379147	chr2:139366164-139379147	3	+	139366164	139366164	8553170	4	38,90,191,238,	0,774,2129,12745,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	139469774	139477747	chr2:139469774-139477747	3	+	139469774	139469774	8553170	2	210,256,	0,7717,
#Deleted in new
chr2	139511423	139511555	chr2:139511423-139511555	3	+	139511423	139511423	8553170	1	132,	0,
#Deleted in new
chr2	139668546	139669305	chr2:139668546-139669305	7	+	139668546	139668546	16724991	1	759,	0,
#Deleted in new
chr2	139732707	139733282	chr2:139732707-139733282	7	-	139732707	139732707	16724991	1	575,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	139824895	139825877	chr2:139824895-139825877	3	-	139824895	139824895	8553170	2	261,37,	0,945,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	139982683	139982986	chr2:139982683-139982986	3	+	139982683	139982683	8553170	1	303,	0,
#Partially deleted in new
chr2	140103582	140131780	chr2:140103582-140131780	3	-	140103582	140103582	8553170	4	188,63,54,139,	0,10459,12808,28059,
#Deleted in new
chr2	140216996	140217239	chr2:140216996-140217239	7	-	140216996	140216996	16724991	1	243,	0,
#Partially deleted in new
chr2	140217650	140220368	chr2:140217650-140220368	7	-	140217650	140217650	16724991	2	307,705,	0,2013,
#Deleted in new
chr2	140220583	140221485	chr2:140220583-140221485	7	-	140220583	140220583	16724991	1	902,	0,
#Partially deleted in new
chr2	140231422	142131701	chr2:140231422-142131701	3	-	140233185	142130729	789624	91	1904,99,145,91,77,105,175,162,165,126,174,117,107,224,242,120,135,138,126,123,133,107,130,107,117,120,120,117,94,149,189,200,182,123,86,184,188,141,123,129,120,123,150,114,120,129,126,193,205,190,372,125,152,127,130,135,132,126,141,150,95,175,228,132,245,165,205,198,246,201,183,168,81,117,126,141,123,190,220,181,237,144,172,223,163,258,129,120,138,123,1054,	0,3363,6729,8019,15663,38819,43001,66385,83512,90540,92470,94339,103030,104192,119374,121530,124919,126556,127398,133238,139287,139756,141585,146757,154470,211081,212907,213140,219145,225032,226040,243715,253920,256194,261185,264142,270264,271540,275373,278505,283230,285466,294421,294814,302598,305158,309550,310356,367208,370027,468827,470298,470718,471004,484550,485259,537790,539458,544675,582234,608568,609495,618679,620229,636167,636676,652394,654715,671497,676454,691542,718812,720437,750737,758109,762572,773912,782133,784273,788499,817563,823693,827460,830628,956998,997760,1015803,1023099,1248973,1578856,1899225,
#Partially deleted in new
chr2	140231771	140358068	chr2:140231771-140358068	0	-	140233185	140358068	789624	17	1555,145,91,77,105,175,162,165,126,174,117,107,224,242,120,135,90,	0,6380,7670,15314,38470,42652,66036,83163,90191,92121,93990,102681,103843,119025,121181,124570,126207,
#Deleted in new
chr2	140234736	140234923	chr2:140234736-140234923	3	-	140234736	140234736	8553170	1	187,	0,
#Partially deleted in new
chr2	140238181	140297969	chr2:140238181-140297969	0	-	140238181	140297969	789624	7	115,91,77,114,105,175,162,	0,1260,8904,31086,32060,36242,59626,
#Deleted in new
chr2	140586625	140586685	chr2:140586625-140586685	3	-	140586625	140586625	5263520	1	60,	0,
#Partially deleted in new
chr2	140683359	140683888	chr2:140683359-140683888	7	-	140683359	140683359	16724991	1	529,	0,
#Partially deleted in new
chr2	140850130	142131005	chr2:140850130-142131005	0	-	140850130	142130729	789624	14	199,132,245,165,205,198,246,201,183,168,81,117,123,358,	0,1521,17459,17968,33686,36007,52789,57746,72834,100104,101729,132029,960148,1280517,
#Deleted in new
chr2	140898422	140899106	chr2:140898422-140899106	7	+	140898422	140898422	16724991	1	684,	0,
#Deleted in new
chr2	140992542	140992659	chr2:140992542-140992659	3	+	140992542	140992542	8553170	1	117,	0,
#Partially deleted in new
chr2	141167256	141167357	chr2:141167256-141167357	3	-	141167256	141167256	8553170	1	101,	0,
#Partially deleted in new
chr2	141208081	141208376	chr2:141208081-141208376	7	-	141208081	141208081	16724991	1	295,	0,
#Partially deleted in new
chr2	141805363	141810401	chr2:141805363-141810401	0	-	141805363	141805363	8553170	2	391,123,	0,4915,
#Partially deleted in new
chr2	142131177	142137830	chr2:142131177-142137830	3	-	142131177	142131177	8553170	2	349,67,	0,6586,
#Deleted in new
chr2	142543417	142543975	chr2:142543417-142543975	7	+	142543417	142543417	16724991	1	558,	0,
#Deleted in new
chr2	142854094	142855998	chr2:142854094-142855998	7	+	142854094	142854094	16724991	1	1904,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	142877497	143055832	chr2:142877497-143055832	3	+	142885367	143042172	0	14	239,188,121,83,62,72,75,147,99,74,53,86,231,13786,	0,7851,41111,50161,77312,78705,80143,83126,107586,108450,152129,155738,162930,164549,
#Partially deleted in new
chr2	142877656	142990052	chr2:142877656-142990052	1	+	142885367	142988866	0	12	80,188,121,83,62,72,75,147,99,74,60,711,	0,7692,40952,50002,77153,78546,79984,82967,107427,108291,111188,111685,
#Partially deleted in new
chr2	142877663	143042172	chr2:142877663-143042172	1	+	142885367	143042172	0	15	73,86,188,121,83,62,72,75,147,99,74,53,86,231,126,	0,3681,7685,40945,49995,77146,78539,79977,82960,107420,108284,151963,155572,162764,164383,
#Partially deleted in new
chr2	142877665	142947421	chr2:142877665-142947421	1	+	142885367	142947182	789624	5	71,188,121,83,313,	0,7683,40943,49993,69443,
#Partially deleted in new
chr2	142877683	142954871	chr2:142877683-142954871	0	+	142885367	142927720	789624	6	53,204,188,83,46,62,	0,1779,7665,49975,76338,77126,
#Partially deleted in new
chr2	142885394	142964752	chr2:142885394-142964752	0	+	142885394	142964661	789624	8	142,121,83,62,72,75,147,100,	0,33214,42264,69415,70808,72246,75229,79258,
#Partially deleted in new
chr2	142918678	142958075	chr2:142918678-142958075	0	+	142918678	142918678	8553170	5	51,83,62,72,435,	0,8980,36131,37524,38962,
#Partially deleted in new
chr2	142918678	142967494	chr2:142918678-142967494	0	+	142918678	142967328	789624	7	51,83,62,72,75,147,181,	0,8980,36131,37524,38962,41945,48635,
#Partially deleted in new
chr2	142927658	142971393	chr2:142927658-142971393	0	+	142927658	142971203	789624	6	83,62,72,75,147,223,	0,27151,28544,29982,32965,43512,
#Partially deleted in new
chr2	142947299	142948086	chr2:142947299-142948086	7	-	142947299	142947299	16724991	1	787,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	143091361	143238352	chr2:143091361-143238352	1	+	143155490	143235978	789624	7	61,102,179,69,62,88,2407,	0,795,64115,110772,125022,137219,144584,
#Deleted in new
chr2	143093055	143094164	chr2:143093055-143094164	7	-	143093055	143093055	16724991	1	1109,	0,
#Deleted in new
chr2	143094232	143094715	chr2:143094232-143094715	7	+	143094232	143094232	16724991	1	483,	0,
#Deleted in new
chr2	143094788	143096555	chr2:143094788-143096555	7	-	143094788	143094788	16724991	1	1767,	0,
#Deleted in new
chr2	143096838	143098007	chr2:143096838-143098007	7	-	143096838	143096838	16724991	1	1169,	0,
#Deleted in new
chr2	143098122	143098417	chr2:143098122-143098417	7	-	143098122	143098122	16724991	1	295,	0,
#Deleted in new
chr2	143098483	143098829	chr2:143098483-143098829	7	-	143098483	143098483	16724991	1	346,	0,
#Partially deleted in new
chr2	143098897	143099933	chr2:143098897-143099933	7	-	143098897	143098897	16724991	2	147,567,	0,469,
#Deleted in new
chr2	143099935	143100612	chr2:143099935-143100612	7	-	143099935	143099935	16724991	1	677,	0,
#Deleted in new
chr2	143100929	143101355	chr2:143100929-143101355	7	-	143100929	143100929	16724991	1	426,	0,
#Partially deleted in new
chr2	143129313	143768352	chr2:143129313-143768352	3	+	143155490	143768172	0	14	153,179,69,62,88,90,99,130,123,99,78,135,106,364,	0,26163,72820,87070,99267,121197,306287,307599,358059,389952,427094,494819,574105,638675,
#Partially deleted in new
chr2	143129412	143437357	chr2:143129412-143437357	0	+	143129412	143129412	8553170	8	54,179,69,62,88,90,99,445,	0,26064,72721,86971,99168,121098,306188,307500,
#Partially deleted in new
chr2	143162077	143172172	chr2:143162077-143172172	3	-	143162077	143162077	8553170	4	175,135,82,22,	0,264,9877,10073,
#Partially deleted in new
chr2	143193383	143435699	chr2:143193383-143435699	0	+	143193383	143193383	8553170	6	113,69,62,88,90,99,	0,8750,23000,35197,57127,242217,
#Partially deleted in new
chr2	143228097	143435699	chr2:143228097-143435699	0	+	143228097	143228097	8553170	4	60,88,90,99,	0,483,22413,207503,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	143247289	143437042	chr2:143247289-143437042	0	+	143247289	143247289	8553170	4	115,90,99,130,	0,3221,188311,189623,
#Partially deleted in new
chr2	143295420	143480789	chr2:143295420-143480789	0	-	143295420	143295420	8553170	4	19,175,173,60,	0,48623,55803,185309,
#Partially deleted in new
chr2	143314433	143480781	chr2:143314433-143480781	3	-	143314433	143314433	8553170	4	161,175,173,52,	0,29610,36790,166296,
#Partially deleted in new
chr2	143350930	143480789	chr2:143350930-143480789	1	-	143350930	143350930	8553170	3	466,48,60,	0,121041,129799,
#Deleted in new
chr2	143435263	143437103	chr2:143435263-143437103	0	+	143435263	143435263	8553170	2	436,191,	0,1649,
#Partially deleted in new
chr2	143435265	143533317	chr2:143435265-143533317	0	+	143435265	143435265	8553170	6	24,99,130,123,99,65,	0,335,1647,52107,84000,97987,
#Partially deleted in new
chr2	143435313	143487479	chr2:143435313-143487479	0	+	143435313	143435313	8553170	3	386,130,107,	0,1599,52059,
#Partially deleted in new
chr2	143487362	143519485	chr2:143487362-143519485	0	+	143487362	143487362	8553170	2	133,220,	0,31903,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	143518866	143598002	chr2:143518866-143598002	3	-	143518866	143518866	8553170	5	265,98,236,48,66,	0,3102,45065,74387,79070,
#Partially deleted in new
chr2	143519277	143703960	chr2:143519277-143703960	0	+	143519277	143519277	8553170	4	87,78,135,542,	0,37130,104855,184141,
#Partially deleted in new
chr2	143556407	143624267	chr2:143556407-143624267	0	+	143556407	143587777	789624	3	78,132,135,	0,31278,67725,
#Partially deleted in new
chr2	143601516	143608759	chr2:143601516-143608759	3	+	143601516	143601516	8553170	3	85,202,1230,	0,5229,6013,
#Partially deleted in new
chr2	143640755	143648885	chr2:143640755-143648885	0	-	143640755	143640755	8553170	2	506,174,	0,7956,
#Partially deleted in new
chr2	143640767	143656179	chr2:143640767-143656179	3	-	143640767	143640767	8553170	3	494,38,55,	0,7944,15357,
#Partially deleted in new
chr2	143706410	143768348	chr2:143706410-143768348	0	+	143706410	143706410	8553170	2	177,360,	0,61578,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	143766619	143776073	chr2:143766619-143776073	3	-	143766619	143766619	8553170	3	268,176,71,	0,8563,9383,
#Partially deleted in new
chr2	143799466	143819599	chr2:143799466-143819599	3	+	143799466	143799466	8553170	3	181,111,172,	0,6320,19961,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	143897262	143897361	chr2:143897262-143897361	3	+	143897262	143897262	8553170	1	99,	0,
#Partially deleted in new
chr2	143937072	143964156	chr2:143937072-143964156	3	+	143937072	143937072	789624	3	564,151,331,	0,3941,26753,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	143938067	144235740	chr2:143938067-144235740	1	-	143947051	144208781	789624	11	9068,92,71,145,110,354,174,168,202,65,65,	0,13914,14705,19127,32585,69114,203814,207504,270535,273447,297608,
#Partially deleted in new
chr2	143945753	144294493	chr2:143945753-144294493	1	-	143947051	144208781	789624	12	1382,92,71,145,110,354,174,168,202,65,62,129,	0,6228,7019,11441,24899,61428,196128,199818,262849,265761,289922,348611,
#Partially deleted in new
chr2	143946013	144237341	chr2:143946013-144237341	1	-	143947051	144208781	789624	10	1122,92,71,354,174,168,202,65,62,98,	0,5968,6759,61168,195868,199558,262589,265501,289662,291230,
#Partially deleted in new
chr2	143946015	144211579	chr2:143946015-144211579	1	-	143951998	144208781	789624	9	1120,92,71,110,354,174,168,202,65,	0,5966,6757,24637,61166,195866,199556,262587,265499,
#Partially deleted in new
chr2	143946015	144295318	chr2:143946015-144295318	1	-	143947051	144208781	789624	12	1120,92,71,145,110,354,174,168,202,65,62,44,	0,5966,6757,11179,24637,61166,195866,199556,262587,265499,289660,349259,
#Partially deleted in new
chr2	143946015	144235737	chr2:143946015-144235737	1	-	143947051	144208781	789624	10	1120,92,71,145,110,174,168,202,65,62,	0,5966,6757,11179,24637,195866,199556,262587,265499,289660,
#Partially deleted in new
chr2	143946015	144332534	chr2:143946015-144332534	3	-	143947051	144208781	789624	12	1120,92,71,145,110,354,174,168,202,83,62,96,	0,5966,6757,11179,24637,61166,195866,199556,262587,265499,289660,386423,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	143946015	144177217	chr2:143946015-144177217	1	-	143947051	144177217	789624	9	1120,92,71,145,110,354,174,168,83,	0,5966,6757,11179,24637,61166,195866,199556,231119,
#Partially deleted in new
chr2	143946022	144211582	chr2:143946022-144211582	0	-	143951998	144208781	789624	9	1113,92,71,110,354,174,168,202,68,	0,5959,6750,24630,61159,195859,199549,262580,265492,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	143946032	144235739	chr2:143946032-144235739	0	-	144178938	144208781	789624	13	1103,92,71,145,110,354,174,168,106,126,202,65,64,	0,5949,6740,11162,24620,61149,195849,199539,231102,232802,262570,265482,289643,
#Partially deleted in new
chr2	143946826	144332516	chr2:143946826-144332516	1	-	143947051	144142015	789624	10	309,92,71,145,110,354,174,168,62,78,	0,5155,5946,10368,23826,60355,195055,198745,288849,385612,
#Deleted in new
chr2	143950944	143952053	chr2:143950944-143952053	0	-	143950944	143950944	8553170	2	68,72,	0,1037,
#Partially deleted in new
chr2	144005750	144235737	chr2:144005750-144235737	0	-	144005750	144005750	8553170	6	1785,174,168,202,65,62,	0,136131,139821,202852,205764,229925,
#Partially deleted in new
chr2	144007333	144145905	chr2:144007333-144145905	0	-	144007333	144007333	8553170	4	202,174,168,26,	0,134548,138238,138546,
#Partially deleted in new
chr2	144127923	144178936	chr2:144127923-144178936	0	-	144127923	144127923	8553170	5	121,77,174,168,102,	0,322,13958,17648,50911,
#Partially deleted in new
chr2	144141881	144235737	chr2:144141881-144235737	0	-	144141881	144208781	789624	6	174,168,202,65,82,62,	0,3690,66721,69633,88359,93794,
#Partially deleted in new
chr2	144145619	144319870	chr2:144145619-144319870	0	-	144145619	144208781	789624	5	120,202,65,62,152,	0,62983,65895,90056,174099,
#Partially deleted in new
chr2	144178307	144235739	chr2:144178307-144235739	0	-	144178307	144178307	8553170	4	653,202,65,64,	0,30295,33207,57368,
#Partially deleted in new
chr2	144178833	144332568	chr2:144178833-144332568	0	-	144178938	144208781	789624	5	127,202,65,62,130,	0,29769,32681,56842,153605,
#Partially deleted in new
chr2	144210834	144319870	chr2:144210834-144319870	0	-	144210834	144210834	8553170	5	403,65,62,110,152,	0,680,24841,106644,108884,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	144364363	144396562	chr2:144364363-144396562	0	-	144365564	144396562	789624	2	1263,151,	0,32048,
#Partially deleted in new
chr2	144384080	144520395	chr2:144384080-144520395	3	-	144389450	144517350	0	10	5948,181,1970,109,215,189,72,258,142,457,	0,12331,14220,17118,19835,20755,40715,45688,133197,135858,
#Partially deleted in new
chr2	144384080	144507420	chr2:144384080-144507420	0	-	144384080	144384080	8553170	9	5948,181,1970,109,215,189,72,258,42,	0,12331,14220,17118,19835,20755,40715,45688,123298,
#Partially deleted in new
chr2	144384080	144431022	chr2:144384080-144431022	1	-	144389450	144424862	789624	9	5948,181,1970,109,215,189,72,258,42,	0,12331,14220,17118,19835,20755,40715,45688,46900,
#Partially deleted in new
chr2	144384080	144520362	chr2:144384080-144520362	1	-	144389450	144517350	789624	10	5948,181,2045,109,215,189,72,258,142,424,	0,12331,14220,17118,19835,20755,40715,45688,133197,135858,
#Partially deleted in new
chr2	144384080	144482341	chr2:144384080-144482341	0	-	144384080	144384080	8553170	9	5948,181,1970,109,215,189,72,258,173,	0,12331,14220,17118,19835,20755,40715,45688,98088,
#Partially deleted in new
chr2	144384080	144455200	chr2:144384080-144455200	1	-	144389450	144424862	789624	9	5948,181,1970,109,215,189,72,258,149,	0,12331,14220,17118,19835,20755,40715,45688,70971,
#Partially deleted in new
chr2	144384080	144516164	chr2:144384080-144516164	1	-	144389450	144424862	789624	9	5948,181,1970,109,215,189,72,258,216,	0,12331,14220,17118,19835,20755,40715,45688,131868,
#Partially deleted in new
chr2	144384080	144430942	chr2:144384080-144430942	1	-	144389450	144424862	789624	9	5948,181,1970,109,215,189,72,258,198,	0,12331,14220,17118,19835,20755,40715,45688,46664,
#Partially deleted in new
chr2	144384080	144430934	chr2:144384080-144430934	1	-	144389450	144424862	789624	9	5948,181,1970,109,215,189,72,258,397,	0,12331,14220,17118,19835,20755,40715,45688,46457,
#Partially deleted in new
chr2	144384080	144516397	chr2:144384080-144516397	1	-	144389450	144403945	789624	8	5948,181,1970,109,215,189,258,62,	0,12331,14220,17118,19835,20755,45688,132255,
#Partially deleted in new
chr2	144388015	144520102	chr2:144388015-144520102	1	-	144388874	144517350	789624	6	867,109,215,258,142,164,	0,13183,15900,41753,129262,131923,
#Partially deleted in new
chr2	144388017	144517825	chr2:144388017-144517825	1	-	144389450	144517350	0	10	2011,181,1970,109,215,189,72,258,142,214,	0,8394,10283,13181,15898,16818,36778,41751,129260,129594,
#Partially deleted in new
chr2	144388309	144518424	chr2:144388309-144518424	0	-	144424915	144517350	789624	10	1719,181,1970,109,215,189,158,258,142,132,	0,8102,9991,12889,15606,16526,36486,41459,128968,129983,
#Partially deleted in new
chr2	144388340	144520398	chr2:144388340-144520398	1	-	144389374	144517350	789624	11	1413,163,181,1970,109,215,189,72,258,142,460,	0,1525,8071,9960,12858,15575,16495,36455,41428,128937,131598,
#Partially deleted in new
chr2	144388661	144398318	chr2:144388661-144398318	0	-	144394439	144398318	789624	4	1367,88,181,18,	0,5731,7750,9639,
#Partially deleted in new
chr2	144389212	144520119	chr2:144389212-144520119	1	-	144389450	144517350	0	9	816,181,1970,109,215,189,258,142,181,	0,7199,9088,11986,14703,15623,40556,128065,130726,
#Partially deleted in new
chr2	144389284	144517551	chr2:144389284-144517551	1	-	144389450	144517350	0	9	744,181,1970,109,215,189,72,258,274,	0,7127,9016,11914,14631,15551,35511,40484,127993,
#Partially deleted in new
chr2	144389316	144520006	chr2:144389316-144520006	1	-	144389450	144517350	789624	10	712,181,1970,109,215,189,69,258,142,68,	0,7095,8984,11882,14599,15519,35479,40452,127961,130622,
#Partially deleted in new
chr2	144390551	144396461	chr2:144390551-144396461	0	-	144390587	144396461	789624	2	50,50,	0,5860,
#Partially deleted in new
chr2	144399079	144517718	chr2:144399079-144517718	0	-	144399079	144517676	789624	8	1191,109,215,189,72,258,142,60,	0,2119,4836,5756,25716,30689,118198,118579,
#Partially deleted in new
chr2	144399350	144521057	chr2:144399350-144521057	0	-	144399350	144517350	789624	9	920,109,215,189,72,258,142,270,502,	0,1848,4565,5485,25445,30418,117927,120588,121205,
#Partially deleted in new
chr2	144399869	144518261	chr2:144399869-144518261	0	-	144399869	144518148	789624	8	401,109,215,189,72,258,142,128,	0,1329,4046,4966,24926,29899,117408,118264,
#Deleted in new
chr2	144403994	144405373	chr2:144403994-144405373	0	-	144403994	144403994	8553170	2	136,538,	0,841,
#Partially deleted in new
chr2	144404097	144517506	chr2:144404097-144517506	0	-	144404097	144517350	789624	4	33,189,258,229,	0,738,25671,113180,
#Partially deleted in new
chr2	144404995	144518450	chr2:144404995-144518450	0	-	144404995	144517350	789624	4	29,258,142,158,	0,24773,112282,113297,
#Partially deleted in new
chr2	144405002	144520361	chr2:144405002-144520361	0	-	144405002	144517350	789624	6	22,72,258,142,154,423,	0,19793,24766,112275,113290,114936,
#Partially deleted in new
chr2	144424855	144518406	chr2:144424855-144518406	0	-	144497711	144517350	789624	5	12,258,57,142,114,	0,4913,72852,92422,93437,
#Partially deleted in new
chr2	144426512	144520119	chr2:144426512-144520119	0	-	144426512	144426512	8553170	3	3514,142,181,	0,90765,93426,
#Partially deleted in new
chr2	144429555	144517557	chr2:144429555-144517557	0	-	144429555	144429555	8553170	2	471,280,	0,87722,
#Partially deleted in new
chr2	144429602	144520386	chr2:144429602-144520386	0	-	144429602	144429602	8553170	3	424,142,35,	0,87675,90749,
#Partially deleted in new
chr2	144429787	144516761	chr2:144429787-144516761	0	-	144429787	144429787	8553170	2	239,304,	0,86670,
#Partially deleted in new
chr2	144429825	144517897	chr2:144429825-144517897	0	-	144429825	144517350	789624	3	201,142,211,	0,87452,87861,
#Partially deleted in new
chr2	144429825	144520119	chr2:144429825-144520119	0	-	144429825	144429825	8553170	4	201,57,142,181,	0,67882,87452,90113,
#Partially deleted in new
chr2	144429910	144520400	chr2:144429910-144520400	0	-	144429910	144517350	789624	4	116,142,270,49,	0,87367,90028,90441,
#Partially deleted in new
chr2	144429981	144518026	chr2:144429981-144518026	0	-	144429981	144517350	789624	3	45,142,281,	0,87296,87764,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	144444847	144450450	chr2:144444847-144450450	3	+	144444847	144444847	8553170	5	35,48,123,144,294,	0,196,3899,4788,5309,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	144461111	144464078	chr2:144461111-144464078	0	-	144461111	144461111	8553170	1	2967,	0,
#Partially deleted in new
chr2	144461832	144517632	chr2:144461832-144517632	0	-	144464289	144517350	789624	4	505,177,142,21,	0,2333,55445,55779,
#Partially deleted in new
chr2	144470429	144517309	chr2:144470429-144517309	0	-	144470429	144470429	8553170	2	69,32,	0,46848,
#Deleted in new
chr2	144494264	144496878	chr2:144494264-144496878	3	-	144494264	144494264	8553170	1	2614,	0,
#Deleted in new
chr2	144503661	144518007	chr2:144503661-144518007	0	-	144503661	144503661	8553170	3	972,142,321,	0,13616,14025,
#Deleted in new
chr2	144511384	144520332	chr2:144511384-144520332	1	-	144513693	144517350	789624	3	2413,142,394,	0,5893,8554,
#Deleted in new
chr2	144511388	144517755	chr2:144511388-144517755	1	-	144513693	144517676	789624	3	2409,142,97,	0,5889,6270,
#Deleted in new
chr2	144511388	144520364	chr2:144511388-144520364	1	-	144513693	144517350	789624	3	2409,142,13,	0,5889,8963,
#Deleted in new
chr2	144511388	144520381	chr2:144511388-144520381	0	-	144516515	144517350	789624	5	2409,96,142,270,30,	0,5069,5889,8550,8963,
#Deleted in new
chr2	144511390	144514451	chr2:144511390-144514451	0	-	144511390	144511390	8553170	1	3061,	0,
#Deleted in new
chr2	144513422	144517750	chr2:144513422-144517750	1	-	144513693	144517350	789624	3	375,142,139,	0,3855,4189,
#Deleted in new
chr2	144517350	144524583	chr2:144517350-144524583	0	-	144517350	144517350	8553170	3	69,270,197,	0,2588,7036,
#Deleted in new
chr2	144517977	144521111	chr2:144517977-144521111	3	+	144517977	144517977	8553170	3	598,152,897,	0,1981,2237,
#Deleted in new
chr2	144518187	144520477	chr2:144518187-144520477	0	+	144518187	144518187	8553170	2	388,263,	0,2027,
#Deleted in new
chr2	144518199	144520373	chr2:144518199-144520373	1	+	144518199	144518199	8553170	3	376,275,159,	0,1636,2015,
#Deleted in new
chr2	144518202	144520367	chr2:144518202-144520367	0	+	144518202	144518202	8553170	2	373,532,	0,1633,
#Deleted in new
chr2	144518202	144520383	chr2:144518202-144520383	0	+	144518202	144518202	8553170	4	373,110,152,169,	0,549,1756,2012,
#Deleted in new
chr2	144518405	144520085	chr2:144518405-144520085	0	+	144518405	144518405	8553170	3	170,110,575,	0,346,1105,
#Deleted in new
chr2	144518405	144520822	chr2:144518405-144520822	1	+	144518405	144518405	8553170	5	170,110,152,71,69,	0,346,1553,1809,2348,
#Deleted in new
chr2	144518446	144518574	chr2:144518446-144518574	3	+	144518446	144518446	8553170	1	128,	0,
#Deleted in new
chr2	144518456	144520383	chr2:144518456-144520383	1	+	144518456	144518456	8553170	3	119,600,169,	0,1054,1758,
#Deleted in new
chr2	144518801	144519027	chr2:144518801-144519027	0	+	144518801	144518801	8553170	2	60,40,	0,186,
#Deleted in new
chr2	144518813	144519887	chr2:144518813-144519887	0	+	144518813	144518813	8553170	2	48,52,	0,1022,
#Deleted in new
chr2	144519070	144520028	chr2:144519070-144520028	0	+	144519070	144519070	8553170	2	30,70,	0,888,
#Deleted in new
chr2	144519117	144520268	chr2:144519117-144520268	0	+	144519117	144519117	8553170	2	993,54,	0,1097,
#Deleted in new
chr2	144519348	144520381	chr2:144519348-144520381	0	+	144519348	144519348	8553170	3	127,152,167,	0,610,866,
#Deleted in new
chr2	144519383	144520409	chr2:144519383-144520409	0	+	144519383	144519383	8553170	3	92,275,195,	0,452,831,
#Deleted in new
chr2	144519613	144520905	chr2:144519613-144520905	0	+	144519613	144519613	789624	4	61,152,71,152,	0,345,601,1140,
#Deleted in new
chr2	144519613	144519674	chr2:144519613-144519674	0	+	144519613	144519613	8553170	1	61,	0,
#Deleted in new
chr2	144519853	144520878	chr2:144519853-144520878	0	+	144519853	144519853	8553170	3	257,71,125,	0,361,900,
#Deleted in new
chr2	144520455	144520555	chr2:144520455-144520555	3	+	144520455	144520455	8553170	1	100,	0,
#Deleted in new
chr2	144520595	144521477	chr2:144520595-144521477	0	+	144520595	144520595	8553170	2	86,724,	0,158,
#Deleted in new
chr2	144521038	144521116	chr2:144521038-144521116	3	+	144521038	144521038	8553170	1	78,	0,
#Partially deleted in new
chr2	144566434	144579434	chr2:144566434-144579434	3	+	144566434	144566434	8553170	2	136,226,	0,12774,
#Partially deleted in new
chr2	144667966	144768383	chr2:144667966-144768383	1	+	144667966	144667966	8553170	4	142,72,161,286,	0,23072,98403,100131,
#Partially deleted in new
chr2	144667966	145172078	chr2:144667966-145172078	0	+	144667966	144667966	8553170	6	142,132,161,183,138,81,	0,95430,98403,100131,235699,504031,
#Partially deleted in new
chr2	144667966	145182374	chr2:144667966-145182374	0	+	144667966	144667966	8553170	6	142,132,161,183,138,171,	0,95430,98403,100131,235699,514237,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	144667977	145182374	chr2:144667977-145182374	0	+	144667977	144667977	8553170	7	131,161,183,138,78,134,171,	0,98392,100120,235688,389673,504020,514226,
#Partially deleted in new
chr2	144667977	145182374	chr2:144667977-145182374	0	+	144667977	144667977	8553170	5	131,161,183,54,171,	0,98392,100120,195967,514226,
#Partially deleted in new
chr2	144667977	145182374	chr2:144667977-145182374	0	+	144667977	144667977	8553170	6	131,183,122,140,134,171,	0,100120,402842,496195,504020,514226,
#Partially deleted in new
chr2	144667977	145172131	chr2:144667977-145172131	0	+	144667977	144667977	8553170	4	131,183,88,134,	0,100120,272880,504020,
#Partially deleted in new
chr2	144667977	145182374	chr2:144667977-145182374	0	+	144667977	144667977	8553170	7	131,161,183,88,140,134,171,	0,98392,100120,272880,496195,504020,514226,
#Partially deleted in new
chr2	144667977	145182371	chr2:144667977-145182371	0	+	144667977	144667977	8553170	5	131,72,183,134,168,	0,23061,100120,504020,514226,
#Partially deleted in new
chr2	144667977	145182374	chr2:144667977-145182374	0	+	144667977	144667977	8553170	5	131,183,138,134,171,	0,100120,235688,504020,514226,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	144667982	145182373	chr2:144667982-145182373	0	+	144667982	144667982	8553170	6	126,72,183,156,134,170,	0,23056,100115,348385,504015,514221,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	144667984	145076729	chr2:144667984-145076729	1	+	144667984	144667984	8553170	4	124,183,122,4206,	0,100113,402835,404539,
#Partially deleted in new
chr2	144667984	145044443	chr2:144667984-145044443	0	+	144667984	144667984	8553170	4	124,161,183,78,	0,98385,100113,376381,
#Partially deleted in new
chr2	144667984	145182374	chr2:144667984-145182374	0	+	144667984	144667984	8553170	6	124,183,88,140,134,171,	0,100113,272873,496188,504013,514219,
#Partially deleted in new
chr2	144667984	145182344	chr2:144667984-145182344	0	+	144667984	144667984	8553170	6	124,161,183,140,134,141,	0,98385,100113,496188,504013,514219,
#Partially deleted in new
chr2	144667984	145172085	chr2:144667984-145172085	1	+	144667984	144667984	8553170	7	124,132,161,183,54,140,88,	0,95412,98385,100113,195960,496188,504013,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	144667984	145182374	chr2:144667984-145182374	0	+	144667984	144667984	8553170	7	124,183,223,98,140,134,171,	0,100113,445236,449571,496188,504013,514219,
#Partially deleted in new
chr2	144667984	145182374	chr2:144667984-145182374	0	+	144667984	144667984	8553170	6	124,72,161,183,54,171,	0,23054,98385,100113,195960,514219,
#Partially deleted in new
chr2	144667984	145182331	chr2:144667984-145182331	0	+	144667984	144667984	8553170	6	124,161,183,88,134,128,	0,98385,100113,272873,504013,514219,
#Partially deleted in new
chr2	144667985	144811275	chr2:144667985-144811275	1	+	144667985	144667985	8553170	4	123,72,183,151,	0,23053,100112,143139,
#Partially deleted in new
chr2	144667989	145182374	chr2:144667989-145182374	0	+	144667989	144667989	8553170	6	119,54,127,88,134,171,	0,195955,267367,272868,504008,514214,
#Partially deleted in new
chr2	144667993	145172108	chr2:144667993-145172108	0	+	144667993	144667993	8553170	7	115,161,183,54,140,140,111,	0,98376,100104,195951,267350,496179,504004,
#Partially deleted in new
chr2	144668006	145172131	chr2:144668006-145172131	0	+	144668006	144668006	8553170	5	102,183,54,140,134,	0,100091,195938,496166,503991,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	144668011	145182374	chr2:144668011-145182374	0	+	144668011	144668011	8553170	8	97,72,161,183,78,134,48,171,	0,23027,98358,100086,389639,503986,514034,514192,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	144668011	145182374	chr2:144668011-145182374	0	+	144668011	144668011	8553170	7	97,63,119,161,183,134,171,	0,3590,5475,98358,100086,503986,514192,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	144668013	145172117	chr2:144668013-145172117	0	+	144668013	144668013	8553170	5	95,183,223,98,120,	0,100084,445207,449542,503984,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	144668018	144890214	chr2:144668018-144890214	1	+	144668018	144668018	8553170	4	90,63,183,268,	0,3583,100079,221928,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	144668019	145182374	chr2:144668019-145182374	0	+	144668019	144668019	8553170	8	89,161,183,54,223,98,134,171,	0,98350,100078,195925,445201,449536,503978,514184,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	144668025	145074095	chr2:144668025-145074095	1	+	144668025	144668025	789624	5	83,183,138,122,1572,	0,100072,235640,402794,404498,
#Partially deleted in new
chr2	144668029	145182373	chr2:144668029-145182373	0	+	144668029	144668029	8553170	6	79,183,54,138,134,170,	0,100068,195915,235636,503968,514174,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	144668033	145172131	chr2:144668033-145172131	0	+	144668033	144668033	8553170	6	75,161,183,223,98,134,	0,98336,100064,445187,449522,503964,
#Partially deleted in new
chr2	144668036	145182374	chr2:144668036-145182374	0	+	144668036	144668036	8553170	7	72,161,183,54,138,103,171,	0,98333,100061,195908,235629,512973,514167,
#Partially deleted in new
chr2	144668040	145172016	chr2:144668040-145172016	1	+	144668040	144668040	8553170	4	68,183,98,19,	0,100057,449515,503957,
#Partially deleted in new
chr2	144668040	145182374	chr2:144668040-145182374	0	+	144668040	144668040	8553170	6	68,183,140,134,103,171,	0,100057,496132,503957,512969,514163,
#Partially deleted in new
chr2	144668040	145182374	chr2:144668040-145182374	0	+	144668040	144668040	8553170	6	68,183,138,98,134,171,	0,100057,235625,449515,503957,514163,
#Partially deleted in new
chr2	144668042	145182374	chr2:144668042-145182374	0	+	144668042	144668042	8553170	7	66,161,183,140,134,103,171,	0,98327,100055,496130,503955,512967,514161,
#Partially deleted in new
chr2	144668043	145172131	chr2:144668043-145172131	0	+	144668043	144668043	8553170	6	65,161,183,54,140,134,	0,98326,100054,195901,496129,503954,
#Partially deleted in new
chr2	144668048	145182374	chr2:144668048-145182374	0	+	144668048	144668048	8553170	7	60,161,183,138,134,48,171,	0,98321,100049,235617,503949,513997,514155,
#Partially deleted in new
chr2	144668056	145182374	chr2:144668056-145182374	0	+	144668056	144668056	8553170	5	52,161,183,98,171,	0,98313,100041,449499,514147,
#Partially deleted in new
chr2	144668077	145182374	chr2:144668077-145182374	0	+	144668077	144668077	8553170	7	31,161,183,54,134,103,171,	0,98292,100020,195867,503920,512932,514126,
#Partially deleted in new
chr2	144668086	145182374	chr2:144668086-145182374	0	+	144668086	144668086	8553170	6	22,183,54,66,140,171,	0,100011,195858,197308,496086,514117,
#Partially deleted in new
chr2	144668086	145182374	chr2:144668086-145182374	0	+	144668086	144668086	8553170	7	22,183,54,66,140,134,171,	0,100011,195858,197308,496086,503911,514117,
#Partially deleted in new
chr2	144688412	144690185	chr2:144688412-144690185	3	-	144688412	144688412	8553170	2	663,136,	0,1637,
#Partially deleted in new
chr2	144691063	145182374	chr2:144691063-145182374	0	+	144691063	144691063	8553170	7	47,132,161,183,98,134,171,	0,72333,75306,77034,426492,480934,491140,
#Deleted in new
chr2	144705216	144705419	chr2:144705216-144705419	3	+	144705216	144705216	8553170	1	203,	0,
#Partially deleted in new
chr2	144708195	145182374	chr2:144708195-145182374	0	+	144708195	144708195	8553170	5	113,161,183,134,171,	0,58174,59902,463802,474008,
#Deleted in new
chr2	144754775	144755998	chr2:144754775-144755998	7	-	144754775	144754775	16724991	1	1223,	0,
#Partially deleted in new
chr2	144763399	145182374	chr2:144763399-145182374	0	+	144763399	144763399	8553170	5	129,161,183,134,171,	0,2970,4698,408598,418804,
#Partially deleted in new
chr2	144766360	145182374	chr2:144766360-145182374	0	+	144766360	144766360	8553170	4	170,183,103,171,	0,1737,414649,415843,
#Partially deleted in new
chr2	144766442	145072931	chr2:144766442-145072931	1	+	144766442	144766442	8553170	6	88,183,54,138,122,408,	0,1655,97502,137223,304377,306081,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	144766509	145182368	chr2:144766509-145182368	0	+	144766509	144766509	8553170	5	21,183,223,98,165,	0,1588,346711,351046,415694,
#Partially deleted in new
chr2	144863979	145182369	chr2:144863979-145182369	0	+	144863979	144863979	8553170	3	19,138,166,	0,39686,318224,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	144877733	144882033	chr2:144877733-144882033	3	-	144877733	144877733	8553170	3	380,37,404,	0,1782,3896,
#Partially deleted in new
chr2	144896565	144903783	chr2:144896565-144903783	1	+	144896565	144896565	8553170	2	72,118,	0,7100,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	145007335	145182374	chr2:145007335-145182374	1	+	145007335	145007335	8553170	5	149,156,80,134,171,	0,9032,10196,164662,174868,
#Partially deleted in new
chr2	145023094	145072654	chr2:145023094-145072654	1	+	145023094	145023094	8553170	3	179,181,131,	0,20792,49429,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	145023095	145182509	chr2:145023095-145182509	1	+	145023095	145023095	8553170	4	178,134,91,306,	0,148902,155781,159108,
#Partially deleted in new
chr2	145023157	145182405	chr2:145023157-145182405	1	+	145023157	145023157	8553170	3	116,134,202,	0,148840,159046,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	145023171	145182641	chr2:145023171-145182641	2	+	145023171	145023171	8553170	4	102,223,134,438,	0,90049,148826,159032,
#Partially deleted in new
chr2	145023186	145172675	chr2:145023186-145172675	1	+	145023186	145023186	8553170	2	87,678,	0,148811,
#Partially deleted in new
chr2	145023226	145221066	chr2:145023226-145221066	0	+	145023226	145023226	8553170	3	47,134,705,	0,148771,197135,
#Partially deleted in new
chr2	145023227	145182649	chr2:145023227-145182649	0	+	145023227	145023227	8553170	4	46,134,48,446,	0,148770,158818,158976,
#Partially deleted in new
chr2	145023227	145073146	chr2:145023227-145073146	0	+	145023227	145023227	8553170	2	46,623,	0,49296,
#Partially deleted in new
chr2	145023227	145043945	chr2:145023227-145043945	0	+	145023227	145023227	8553170	2	46,320,	0,20398,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	145023227	145182617	chr2:145023227-145182617	0	+	145023227	145023227	8553170	6	46,78,92,223,134,414,	0,34423,34586,89993,148770,158976,
#Partially deleted in new
chr2	145023227	145182374	chr2:145023227-145182374	0	+	145023227	145023227	8553170	5	46,140,134,103,171,	0,140945,148770,157782,158976,
#Partially deleted in new
chr2	145023227	145182424	chr2:145023227-145182424	0	+	145023227	145023227	8553170	5	46,134,103,48,221,	0,148770,157782,158818,158976,
#Partially deleted in new
chr2	145023227	145182541	chr2:145023227-145182541	0	+	145023227	145023227	8553170	4	46,122,134,338,	0,47592,148770,158976,
#Partially deleted in new
chr2	145023227	145182491	chr2:145023227-145182491	0	+	145023227	145023227	8553170	5	46,125,98,134,288,	0,20659,21138,148770,158976,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	145023227	145182465	chr2:145023227-145182465	0	+	145023227	145023227	8553170	4	46,73,134,262,	0,67603,148770,158976,
#Partially deleted in new
chr2	145023227	145186805	chr2:145023227-145186805	0	+	145023227	145023227	8553170	6	46,134,135,93,136,128,	0,148770,158976,160853,162768,163450,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	145023227	145091743	chr2:145023227-145091743	0	+	145023227	145023227	8553170	3	46,73,304,	0,67603,68212,
#Partially deleted in new
chr2	145023227	145182430	chr2:145023227-145182430	0	+	145023227	145023227	8553170	4	46,300,134,227,	0,49296,148770,158976,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	145023229	145182494	chr2:145023229-145182494	0	+	145023229	145023229	8553170	5	44,73,134,103,291,	0,67601,148768,157780,158974,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	145023231	145058210	chr2:145023231-145058210	0	+	145023231	145023231	8553170	2	42,560,	0,34419,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	145023235	145072843	chr2:145023235-145072843	0	+	145023235	145023235	8553170	4	38,78,122,320,	0,34415,47584,49288,
#Partially deleted in new
chr2	145023252	145073025	chr2:145023252-145073025	0	+	145023252	145023252	8553170	4	21,98,122,502,	0,21113,47567,49271,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	145023252	145113573	chr2:145023252-145113573	0	+	145023252	145023252	8553170	4	21,122,300,353,	0,47567,49271,89968,
#Partially deleted in new
chr2	145023252	145182649	chr2:145023252-145182649	0	+	145023252	145023252	8553170	4	21,98,134,446,	0,94303,148745,158951,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	145023252	145073085	chr2:145023252-145073085	0	+	145023252	145023252	8553170	3	21,78,562,	0,34398,49271,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	145023252	145113533	chr2:145023252-145113533	0	+	145023252	145023252	8553170	4	21,122,398,272,	0,47567,49271,90009,
#Partially deleted in new
chr2	145023252	145044875	chr2:145023252-145044875	0	+	145023252	145023252	8553170	4	21,150,125,510,	0,20373,20634,21113,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	145023252	145073690	chr2:145023252-145073690	0	+	145023252	145023252	8553170	4	21,122,300,234,	0,47567,49271,50204,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	145023252	145182651	chr2:145023252-145182651	0	+	145023252	145023252	8553170	4	21,134,235,448,	0,148745,155480,158951,
#Partially deleted in new
chr2	145117555	145221067	chr2:145117555-145221067	0	+	145117555	145117555	8553170	2	98,703,	0,102809,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	145171997	145182515	chr2:145171997-145182515	0	+	145171997	145171997	8553170	3	134,97,312,	0,9199,10206,
#Partially deleted in new
chr2	145171997	145262875	chr2:145171997-145262875	0	+	145171997	145171997	8553170	7	134,128,273,86,159,61,278,	0,14680,16870,52889,87188,89883,90600,
#Partially deleted in new
chr2	145171997	145188907	chr2:145171997-145188907	0	+	145171997	145171997	8553170	6	134,150,101,136,128,40,	0,10206,12075,13998,14680,16870,
#Partially deleted in new
chr2	145171997	145262988	chr2:145171997-145262988	0	+	145171997	145171997	8553170	6	134,128,273,159,61,391,	0,14680,16870,87188,89883,90600,
#Partially deleted in new
chr2	145182322	145220556	chr2:145182322-145220556	1	+	145182322	145182322	8553170	4	16,128,273,192,	0,4355,6545,38042,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	145294276	145331847	chr2:145294276-145331847	3	-	145294276	145294276	8553170	5	130,92,34,50,42,	0,820,31129,36420,37529,
#Deleted in new
chr2	145337229	145338057	chr2:145337229-145338057	7	+	145337229	145337229	16724991	1	828,	0,
#Partially deleted in new
chr2	145600906	145603423	chr2:145600906-145603423	3	-	145600906	145600906	8553170	3	157,64,186,	0,2182,2331,
#Deleted in new
chr2	145826284	145827830	chr2:145826284-145827830	7	-	145826284	145826284	16724991	1	1546,	0,
#Deleted in new
chr2	145874519	145874845	chr2:145874519-145874845	3	-	145874519	145874519	8553170	1	326,	0,
#Partially deleted in new
chr2	145915089	145931146	chr2:145915089-145931146	3	+	145915089	145915089	8553170	4	116,89,146,396,	0,2390,15350,15661,
#Partially deleted in new
chr2	146194295	146194821	chr2:146194295-146194821	7	+	146194295	146194295	16724991	1	526,	0,
#Deleted in new
chr2	146477426	146478113	chr2:146477426-146478113	7	+	146477426	146477426	16724991	1	687,	0,
#Deleted in new
chr2	146587505	146589310	chr2:146587505-146589310	7	+	146587505	146587505	16724991	1	1805,	0,
#Deleted in new
chr2	146833500	146834038	chr2:146833500-146834038	7	-	146833500	146833500	16724991	1	538,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	146837748	146850310	chr2:146837748-146850310	3	+	146837748	146837748	8553170	6	63,166,190,163,169,55,	0,291,8880,10500,11396,12507,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	146879908	146898218	chr2:146879908-146898218	3	+	146879908	146879908	8553170	5	41,118,74,87,35,	0,873,3295,8178,18275,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	147472132	147472243	chr2:147472132-147472243	3	-	147472132	147472132	8553170	1	111,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	147495437	147495540	chr2:147495437-147495540	3	-	147495437	147495437	8553170	1	103,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	147713454	147713554	chr2:147713454-147713554	7	-	147713454	147713454	16724991	1	100,	0,
#Deleted in new
chr2	147810345	147810777	chr2:147810345-147810777	7	+	147810345	147810345	16724991	1	432,	0,
#Partially deleted in new
chr2	147844516	147930824	chr2:147844516-147930824	3	+	147845152	147927274	0	11	691,208,110,155,144,144,146,115,139,131,3745,	0,51784,54941,55227,70674,72766,73930,75713,78456,81514,82563,
#Partially deleted in new
chr2	147844516	147896447	chr2:147844516-147896447	0	+	147844516	147844516	8553170	2	190,84,	0,51847,
#Partially deleted in new
chr2	147844516	147930826	chr2:147844516-147930826	1	+	147899518	147927274	0	11	190,145,110,155,144,144,146,115,139,131,3747,	0,51847,54941,55227,70674,72766,73930,75713,78456,81514,82563,
#Partially deleted in new
chr2	147844523	147899898	chr2:147844523-147899898	0	+	147844523	147844523	8553170	5	183,208,90,110,155,	0,51777,53717,54934,55220,
#Partially deleted in new
chr2	147844615	147927929	chr2:147844615-147927929	1	+	147845152	147927274	0	12	91,134,208,110,155,144,144,146,115,139,131,850,	0,458,51685,54842,55128,70575,72667,73831,75614,78357,81415,82464,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	147845028	147897114	chr2:147845028-147897114	0	+	147845028	147845028	8553170	2	179,814,	0,51272,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	147877421	147877528	chr2:147877421-147877528	3	+	147877421	147877421	8553170	1	107,	0,
#Deleted in new
chr2	147899400	147902956	chr2:147899400-147902956	3	-	147899400	147899400	8553170	3	202,115,95,	0,1029,3461,
#Deleted in new
chr2	147925686	147927504	chr2:147925686-147927504	0	+	147925686	147925686	8553170	2	475,425,	0,1393,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	147930396	148021604	chr2:147930396-148021604	3	-	147935509	147975958	0	14	5302,68,96,109,87,174,152,49,86,76,91,77,74,157,	0,7749,7901,8743,13039,17654,21976,24950,27901,28394,42342,43051,45505,91051,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	147930396	148020747	chr2:147930396-148020747	1	-	147935509	147975958	0	15	5302,68,96,109,87,174,152,49,86,76,91,77,74,154,115,	0,7749,7901,8743,13039,17654,21976,24950,27901,28394,42342,43051,45505,51531,90236,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	147930396	148020761	chr2:147930396-148020761	1	-	147935509	147958839	0	11	5302,68,96,109,87,174,152,49,86,76,129,	0,7749,7901,8743,13039,17654,21976,24950,27901,28394,90236,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	147930396	148020737	chr2:147930396-148020737	1	-	147935509	147972741	0	13	5302,68,96,109,87,174,152,49,86,76,91,77,105,	0,7749,7901,8743,13039,17654,21976,24950,27901,28394,42342,43051,90236,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	147930398	148020723	chr2:147930398-148020723	1	-	147935509	147975958	0	14	5300,68,96,109,87,174,152,49,86,76,91,77,74,91,	0,7747,7899,8741,13037,17652,21974,24948,27899,28392,42340,43049,45503,90234,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	147936312	147938180	chr2:147936312-147938180	0	-	147936312	147936312	8553170	2	703,35,	0,1833,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	147937976	147938650	chr2:147937976-147938650	0	-	147937976	147937976	8553170	2	237,353,	0,321,
#Partially deleted in new
chr2	147947674	147952513	chr2:147947674-147952513	0	-	147947674	147947674	8553170	2	550,141,	0,4698,
#Partially deleted in new
chr2	147948050	147958495	chr2:147948050-147958495	0	-	147948050	147948050	8553170	4	174,152,49,198,	0,4322,7296,10247,
#Partially deleted in new
chr2	147948188	148020761	chr2:147948188-148020761	0	-	147948188	147948188	8553170	6	36,152,49,86,76,129,	0,4184,7158,10109,10602,72444,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	147951447	147972829	chr2:147951447-147972829	0	-	147951447	147951447	8553170	6	191,152,49,86,76,91,	0,925,3899,6850,7343,21291,
#Partially deleted in new
chr2	147952471	148020763	chr2:147952471-148020763	0	-	147952471	147952471	8553170	7	53,49,86,76,91,77,131,	0,2875,5826,6319,20267,20976,68161,
#Partially deleted in new
chr2	147955346	148021565	chr2:147955346-148021565	0	-	147955346	147975958	789624	7	49,86,76,91,77,74,118,	0,2951,3444,17392,18101,20555,66101,
#Partially deleted in new
chr2	147958300	148020724	chr2:147958300-148020724	0	-	147958300	147975958	789624	7	83,76,91,77,74,154,92,	0,490,14438,15147,17601,23627,62332,
#Partially deleted in new
chr2	147958302	148020760	chr2:147958302-148020760	0	-	147958302	147975958	789624	6	81,76,91,77,74,153,	0,488,14436,15145,17599,62305,
#Partially deleted in new
chr2	147958591	148020726	chr2:147958591-148020726	0	-	147958591	147958591	8553170	5	275,91,77,74,94,	0,14147,14856,17310,62041,
#Partially deleted in new
chr2	148021010	148516971	chr2:148021010-148516971	1	+	148458758	148512941	789624	15	36,37,94,151,123,669,103,181,2121,327,209,1209,74,76,4102,	0,637,157689,212234,321203,437192,441571,442728,447330,462099,464731,468375,481425,489049,491859,
#Partially deleted in new
chr2	148021010	148458497	chr2:148021010-148458497	0	+	148021010	148021010	8553170	4	36,94,123,295,	0,157689,321203,437192,
#Partially deleted in new
chr2	148021026	148458358	chr2:148021026-148458358	0	+	148021026	148021026	8553170	5	20,94,151,123,156,	0,157673,212218,321187,437176,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	148021237	148028649	chr2:148021237-148028649	0	+	148021237	148021237	8553170	2	447,3684,	0,3728,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	148021392	148056135	chr2:148021392-148056135	0	+	148021392	148021392	8553170	3	292,59,683,	0,32998,34060,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	148021416	148056079	chr2:148021416-148056079	0	+	148021416	148021416	8553170	4	268,118,59,627,	0,32516,32974,34036,
#Partially deleted in new
chr2	148021436	148233327	chr2:148021436-148233327	0	+	148021436	148021436	8553170	4	248,59,94,83,	0,32954,157263,211808,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	148021450	148265070	chr2:148021450-148265070	0	+	148021450	148021450	8553170	4	234,94,151,892,	0,157249,211794,242728,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	148021450	148072063	chr2:148021450-148072063	0	+	148021450	148021450	8553170	4	234,118,59,1191,	0,32482,32940,49422,
#Partially deleted in new
chr2	148021454	148178793	chr2:148021454-148178793	0	+	148021454	148021454	8553170	2	230,94,	0,157245,
#Partially deleted in new
chr2	148021505	148514333	chr2:148021505-148514333	1	+	148458758	148512941	789624	14	179,94,151,123,669,103,181,2121,327,209,1209,113,76,1464,	0,157194,211739,320708,436697,441076,442233,446835,461604,464236,467880,480891,488554,491364,
#Partially deleted in new
chr2	148021505	148514333	chr2:148021505-148514333	3	+	148458758	148512941	789624	14	179,94,151,123,669,103,181,2121,327,209,1209,113,76,1464,	0,157194,211739,320708,436697,441076,442233,446835,461604,464236,467880,480891,488554,491364,
#Partially deleted in new
chr2	148021592	148041365	chr2:148021592-148041365	0	+	148021592	148021592	8553170	2	92,160,	0,19613,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	148021603	148347611	chr2:148021603-148347611	0	+	148021603	148021603	8553170	5	81,94,151,123,1590,	0,157096,211641,320610,324418,
#Partially deleted in new
chr2	148021629	148244368	chr2:148021629-148244368	0	+	148021629	148021629	8553170	4	55,94,151,658,	0,157070,211615,222081,
#Deleted in new
chr2	148021755	148025038	chr2:148021755-148025038	0	+	148021755	148021755	8553170	2	27,73,	0,3210,
#Deleted in new
chr2	148044379	148044894	chr2:148044379-148044894	3	+	148044379	148044379	8553170	1	515,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	148053932	148056141	chr2:148053932-148056141	0	+	148053932	148053932	8553170	2	118,1751,	0,458,
#Partially deleted in new
chr2	148062153	148062577	chr2:148062153-148062577	3	+	148062153	148062153	8553170	1	424,	0,
#Partially deleted in new
chr2	148068561	148393375	chr2:148068561-148393375	0	+	148068561	148068561	8553170	5	32,94,151,123,75,	0,110138,164683,273652,324739,
#Partially deleted in new
chr2	148068571	148458317	chr2:148068571-148458317	0	+	148068571	148068571	8553170	6	22,94,87,151,123,115,	0,110128,151375,164673,273642,389631,
#Partially deleted in new
chr2	148178699	148472455	chr2:148178699-148472455	1	+	148458758	148470499	789624	8	94,151,123,174,669,103,181,4115,	0,54545,163514,268867,279503,283882,285039,289641,
#Partially deleted in new
chr2	148196207	148233316	chr2:148196207-148233316	0	+	148196207	148196207	8553170	2	28,72,	0,37037,
#Partially deleted in new
chr2	148233347	148330534	chr2:148233347-148330534	0	+	148233347	148233347	8553170	2	48,52,	0,97135,
#Partially deleted in new
chr2	148260573	148260708	chr2:148260573-148260708	3	-	148260573	148260573	8553170	1	135,	0,
#Partially deleted in new
chr2	148295655	148296679	chr2:148295655-148296679	7	-	148295655	148295655	16724991	1	1024,	0,
#Partially deleted in new
chr2	148330505	148342290	chr2:148330505-148342290	0	+	148330505	148330505	8553170	2	95,77,	0,11708,
#Partially deleted in new
chr2	148447566	148460277	chr2:148447566-148460277	1	+	148458758	148460222	789624	3	174,669,59,	0,10636,12652,
#Partially deleted in new
chr2	148458446	148513368	chr2:148458446-148513368	0	+	148458758	148510077	789624	10	425,103,181,2121,327,209,115,74,76,499,	0,4135,5292,9894,24663,27295,30939,43989,51613,54423,
#Partially deleted in new
chr2	148458629	148513548	chr2:148458629-148513548	1	+	148458758	148512941	789624	10	242,103,181,2121,1026,209,1209,74,76,679,	0,3952,5109,9711,24480,27112,30756,43806,51430,54240,
#Partially deleted in new
chr2	148468724	148514090	chr2:148468724-148514090	0	+	148468724	148512941	789624	6	1737,1026,209,74,76,1221,	0,14385,17017,33711,41335,44145,
#Partially deleted in new
chr2	148469507	148513422	chr2:148469507-148513422	0	+	148469507	148490627	789624	7	954,327,209,1402,74,76,553,	0,13602,16234,19878,32928,40552,43362,
#Deleted in new
chr2	148481736	148483153	chr2:148481736-148483153	0	+	148481736	148481736	8553170	2	56,44,	0,1373,
#Partially deleted in new
chr2	148485115	148513463	chr2:148485115-148513463	0	+	148485115	148485115	8553170	5	835,1209,74,76,594,	0,4270,17320,24944,27754,
#Partially deleted in new
chr2	148490433	148513371	chr2:148490433-148513371	0	+	148490433	148512941	789624	2	161,502,	0,22436,
#Deleted in new
chr2	148502442	148502997	chr2:148502442-148502997	0	+	148502442	148502442	8553170	2	67,33,	0,522,
#Partially deleted in new
chr2	148502994	148510132	chr2:148502994-148510132	0	+	148502994	148502994	8553170	2	27,73,	0,7065,
#Deleted in new
chr2	148512233	148512943	chr2:148512233-148512943	0	+	148512233	148512233	8553170	2	26,74,	0,636,
#Deleted in new
chr2	148595157	148595328	chr2:148595157-148595328	7	+	148595157	148595157	16724991	1	171,	0,
#Partially deleted in new
chr2	148644439	148754020	chr2:148644439-148754020	0	+	148645089	148754020	789624	5	193,131,160,146,94,	0,600,45774,99182,109487,
#Partially deleted in new
chr2	148644983	148787568	chr2:148644983-148787568	3	+	148645017	148786377	789624	14	187,160,146,207,149,133,192,90,146,344,137,160,334,1264,	0,45230,98638,108943,116798,117686,119971,124167,125808,126060,136660,138613,139684,141321,
#Partially deleted in new
chr2	148644998	148692833	chr2:148644998-148692833	1	+	148645017	148691594	789624	3	172,160,1292,	0,45215,46543,
#Partially deleted in new
chr2	148645419	148761809	chr2:148645419-148761809	0	+	148690273	148761809	789624	5	131,160,146,207,28,	0,44794,98202,108507,116362,
#Partially deleted in new
chr2	148690213	148692248	chr2:148690213-148692248	0	+	148690213	148691841	789624	2	160,628,	0,1407,
#Partially deleted in new
chr2	148753894	148762215	chr2:148753894-148762215	0	+	148753894	148753894	8553170	2	239,434,	0,7887,
#Deleted in new
chr2	148863563	148863804	chr2:148863563-148863804	7	-	148863563	148863563	16724991	1	241,	0,
#Partially deleted in new
chr2	148866469	148888782	chr2:148866469-148888782	3	-	148866469	148866469	8553170	4	108,117,63,496,	0,10756,19065,21817,
#Partially deleted in new
chr2	148870023	148870381	chr2:148870023-148870381	7	-	148870023	148870023	16724991	1	358,	0,
#Partially deleted in new
chr2	148872252	148872797	chr2:148872252-148872797	7	-	148872252	148872252	16724991	1	545,	0,
#Partially deleted in new
chr2	148875249	149026759	chr2:148875249-149026759	3	+	148875617	149011676	789624	26	494,91,74,105,49,56,88,125,105,149,149,176,69,207,147,189,118,77,110,102,61,72,105,217,114,3682,	0,46887,54031,62034,66360,66685,67423,71649,74589,75064,86721,98086,103672,106105,108370,115760,119171,122014,123150,125173,125472,130143,132713,134885,136320,147828,
#Partially deleted in new
chr2	148877874	148888823	chr2:148877874-148888823	1	-	148877874	148877874	8553170	3	1992,63,537,	0,7660,10412,
#Partially deleted in new
chr2	148883522	148885577	chr2:148883522-148885577	1	-	148883522	148883522	8553170	2	842,43,	0,2012,
#Partially deleted in new
chr2	148885839	148888443	chr2:148885839-148888443	0	-	148885839	148885839	8553170	2	497,157,	0,2447,
#Partially deleted in new
chr2	148947296	148962079	chr2:148947296-148962079	0	+	148950343	148962079	789624	4	142,105,149,109,	0,2542,3017,14674,
#Partially deleted in new
chr2	148947899	149023510	chr2:148947899-149023510	0	+	148947899	148947899	789624	20	61,105,149,149,176,69,207,147,189,118,77,110,102,61,72,105,217,114,207,433,	0,1939,2414,14071,25436,31022,33455,35720,43110,46521,49364,50500,52523,52822,57493,60063,62235,63670,72276,75178,
#Partially deleted in new
chr2	148978929	148998836	chr2:148978929-148998836	0	+	148978929	148978929	8553170	6	61,207,147,189,118,1573,	0,2425,4690,12080,15491,18334,
#Partially deleted in new
chr2	148999934	149026759	chr2:148999934-149026759	0	+	148999934	148999934	8553170	7	590,61,72,105,217,114,3682,	0,787,5458,8028,10200,11635,23143,
#Partially deleted in new
chr2	149038106	149101583	chr2:149038106-149101583	0	+	149038106	149038106	8553170	3	28,77,484,	0,39413,62993,
#Partially deleted in new
chr2	149038466	149215262	chr2:149038466-149215262	3	+	149130948	149214710	789624	7	335,71,72,152,99,131,717,	0,92416,122297,166786,169847,174525,176079,
#Partially deleted in new
chr2	149038717	149215256	chr2:149038717-149215256	1	+	149130948	149214710	789624	6	84,71,152,99,131,711,	0,92165,166535,169596,174274,175828,
#Deleted in new
chr2	149068595	149068910	chr2:149068595-149068910	7	-	149068595	149068595	16724991	1	315,	0,
#Partially deleted in new
chr2	149077521	149215262	chr2:149077521-149215262	1	+	149130948	149214710	789624	7	75,61,71,152,99,131,717,	0,41581,53361,127731,130792,135470,137024,
#Partially deleted in new
chr2	149118173	149205322	chr2:149118173-149205322	0	+	149118173	149118173	8553170	8	92,61,71,74,103,72,29,70,	0,929,12709,13094,25680,42590,43275,87079,
#Partially deleted in new
chr2	149118173	149131588	chr2:149118173-149131588	0	+	149118173	149118173	8553170	4	92,61,71,321,	0,929,12709,13094,
#Partially deleted in new
chr2	149118180	149200708	chr2:149118180-149200708	0	+	149130948	149187573	789624	6	85,61,71,154,74,83,	0,922,12702,69245,70477,82445,
#Partially deleted in new
chr2	149118195	149187635	chr2:149118195-149187635	1	+	149130948	149187573	789624	5	70,61,71,72,210,	0,907,12687,42568,69230,
#Partially deleted in new
chr2	149119102	149208367	chr2:149119102-149208367	0	+	149130948	149206026	789624	5	61,71,152,177,54,	0,11780,86150,86916,89211,
#Partially deleted in new
chr2	149142035	149215262	chr2:149142035-149215262	0	+	149142035	149142035	8553170	9	180,98,72,201,69,152,99,131,717,	0,1823,18728,62757,63039,63217,66278,70956,72510,
#Partially deleted in new
chr2	149204524	149215258	chr2:149204524-149215258	1	+	149204524	149214710	789624	5	5,152,99,131,713,	0,728,3789,8467,10021,
#Partially deleted in new
chr2	149320592	149321436	chr2:149320592-149321436	7	+	149320592	149320592	16724991	1	844,	0,
#Partially deleted in new
chr2	149329984	149473623	chr2:149329984-149473623	3	+	149437708	149470850	789624	5	218,189,99,131,2941,	0,107653,119064,138660,140698,
#Partially deleted in new
chr2	149330536	149474148	chr2:149330536-149474148	1	+	149437708	149470850	789624	5	186,189,99,131,3466,	0,107101,118512,138108,140146,
#Partially deleted in new
chr2	149330662	149471095	chr2:149330662-149471095	0	+	149437708	149464177	789624	6	60,189,99,312,131,413,	0,106975,118386,133501,137982,140020,
#Partially deleted in new
chr2	149367700	149449090	chr2:149367700-149449090	0	+	149437708	149449090	789624	4	156,178,189,42,	0,277,69937,81348,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	149367711	149471110	chr2:149367711-149471110	0	+	149437708	149464177	789624	8	145,178,98,189,99,312,131,428,	0,266,2808,69926,81337,96452,100933,102971,
#Deleted in new
chr2	149439896	149440427	chr2:149439896-149440427	7	+	149439896	149439896	16724991	1	531,	0,
#Partially deleted in new
chr2	149569633	149587816	chr2:149569633-149587816	3	-	149569973	149587097	0	8	535,87,131,106,218,145,61,153,	0,1451,6077,6803,9797,12493,17455,18030,
#Partially deleted in new
chr2	149569643	149587602	chr2:149569643-149587602	1	-	149569973	149587097	0	7	525,87,131,106,218,145,514,	0,1441,6067,6793,9787,12483,17445,
#Deleted in new
chr2	149586888	149587726	chr2:149586888-149587726	0	-	149586888	149586888	8553170	2	261,63,	0,775,
#Partially deleted in new
chr2	149587195	149848233	chr2:149587195-149848233	3	+	149587195	149587195	789624	3	655,42,325,	0,156522,260713,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	149610667	149610774	chr2:149610667-149610774	3	-	149610667	149610667	8553170	1	107,	0,
#Partially deleted in new
chr2	149767505	149859191	chr2:149767505-149859191	3	-	149767505	149767505	789624	5	404,87,39,1153,149,	0,1814,36676,89945,91537,
#Partially deleted in new
chr2	149816463	149857685	chr2:149816463-149857685	0	-	149816463	149816463	8553170	2	321,235,	0,40987,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	150171422	150301080	chr2:150171422-150301080	3	+	150171422	150171422	8553170	3	181,79,108,	0,42911,129550,
#Partially deleted in new
chr2	150234891	150257007	chr2:150234891-150257007	3	-	150234891	150234891	789624	3	310,105,149,	0,10691,21967,
#Deleted in new
chr2	150468194	150487694	chr2:150468194-150487694	3	-	150469986	150487417	0	6	2044,135,110,88,188,146,	0,3432,6680,18499,19073,19354,
#Deleted in new
chr2	150468194	150487667	chr2:150468194-150487667	1	-	150469986	150487417	0	5	2044,135,110,88,400,	0,3432,6680,18499,19073,
#Deleted in new
chr2	150468208	150485382	chr2:150468208-150485382	1	-	150469986	150471722	789624	4	2030,135,110,97,	0,3418,6666,17077,
#Deleted in new
chr2	150469776	150486866	chr2:150469776-150486866	0	-	150469776	150469776	8553170	4	462,135,110,173,	0,1850,5098,16917,
#Deleted in new
chr2	150470140	150471960	chr2:150470140-150471960	0	-	150470140	150470140	8553170	2	98,334,	0,1486,
#Deleted in new
chr2	150470218	150475104	chr2:150470218-150475104	0	-	150470218	150470218	8553170	3	20,135,230,	0,1408,4656,
#Deleted in new
chr2	150471637	150487100	chr2:150471637-150487100	0	-	150471637	150471637	8553170	4	124,110,88,135,	0,3237,15056,15328,
#Partially deleted in new
chr2	150474874	150539011	chr2:150474874-150539011	0	-	150474874	150487417	789624	5	110,88,188,85,34,	0,11819,12393,15959,64103,
#Deleted in new
chr2	150474874	150487729	chr2:150474874-150487729	0	-	150474874	150487417	789624	4	110,88,188,95,	0,11819,12393,12760,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	150552531	150572221	chr2:150552531-150572221	3	-	150552531	150552531	789624	6	795,1015,553,76,30,59,	0,3134,17050,18284,18532,19631,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	150566133	150568080	chr2:150566133-150568080	3	+	150566133	150566133	8553170	3	64,90,391,	0,798,1556,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	150595101	150620067	chr2:150595101-150620067	3	-	150595101	150595101	8553170	2	489,79,	0,24887,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	150612380	150635116	chr2:150612380-150635116	0	+	150612380	150612380	8553170	3	128,130,481,	0,19886,22255,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	150628896	150635348	chr2:150628896-150635348	3	+	150628896	150628896	789624	5	225,152,130,104,163,	0,534,3370,5739,6289,
#Partially deleted in new
chr2	150628991	150634970	chr2:150628991-150634970	1	+	150628991	150628991	789624	3	130,89,335,	0,3316,5644,
#Partially deleted in new
chr2	150629054	150635340	chr2:150629054-150635340	0	+	150629054	150629054	789624	5	67,75,130,104,155,	0,585,3212,5581,6131,
#Partially deleted in new
chr2	150629066	150634868	chr2:150629066-150634868	0	+	150629066	150629066	8553170	3	55,130,233,	0,3200,5569,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	150982505	151003474	chr2:150982505-151003474	3	+	150982505	150982505	8553170	4	10,161,101,385,	0,10841,12658,20584,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	151001219	151048774	chr2:151001219-151048774	3	-	151001219	151001219	8553170	5	171,83,105,71,39,	0,32589,42549,46459,47516,
#Deleted in new
chr2	151186187	151186595	chr2:151186187-151186595	7	+	151186187	151186187	16724991	1	408,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	151247939	151261879	chr2:151247939-151261879	3	-	151250905	151261727	789624	4	3725,101,211,155,	0,4815,7593,13785,
#Partially deleted in new
chr2	151260984	151261778	chr2:151260984-151261778	1	-	151261305	151261727	789624	2	525,54,	0,740,
#Partially deleted in new
chr2	151270464	151290057	chr2:151270464-151290057	3	-	151270692	151282948	789624	8	411,107,187,107,163,96,87,465,	0,1161,5019,5293,8363,11483,12403,19128,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	151277254	151289863	chr2:151277254-151289863	0	-	151277254	151277254	8553170	3	1736,87,271,	0,5613,12338,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	151282038	151289894	chr2:151282038-151289894	0	-	151282038	151282948	789624	4	5,87,187,302,	0,829,6852,7554,
#Partially deleted in new
chr2	151282770	151289863	chr2:151282770-151289863	0	-	151282770	151282770	8553170	2	184,271,	0,6822,
#Partially deleted in new
chr2	151357591	151380048	chr2:151357591-151380048	3	+	151357666	151379533	0	6	169,138,162,229,41,685,	0,6351,8464,12428,15957,21772,
#Partially deleted in new
chr2	151366141	151373744	chr2:151366141-151373744	0	+	151366141	151366141	8553170	3	76,229,196,	0,3878,7407,
#Deleted in new
chr2	151368333	151368411	chr2:151368333-151368411	3	+	151368333	151368333	5263520	1	78,	0,
#Deleted in new
chr2	151368333	151368411	chr2:151368333-151368411	3	-	151368333	151368333	5263520	1	78,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	151372002	151372287	chr2:151372002-151372287	3	+	151372002	151372002	8553170	1	285,	0,
#Partially deleted in new
chr2	151409882	151475388	chr2:151409882-151475388	1	+	151410423	151475071	789624	36	151,114,79,97,128,95,190,93,139,152,118,177,111,63,101,87,71,181,108,150,100,265,43,203,100,120,152,81,55,3237,147,78,116,154,109,532,	0,531,1377,4940,6678,6924,10307,13067,18901,23194,25580,26944,27358,28801,30144,32022,33376,33646,35455,36543,41723,45012,46695,47878,48928,50117,51255,52359,52529,53001,58117,58591,58758,59828,64081,64974,
#Partially deleted in new
chr2	151409882	151475622	chr2:151409882-151475622	1	+	151410423	151475071	789624	35	151,114,79,97,128,95,190,93,139,152,118,177,111,63,101,87,71,181,108,150,100,265,43,203,100,120,152,81,55,3237,147,116,154,109,766,	0,531,1377,4940,6678,6924,10307,13067,18901,23194,25580,26944,27358,28801,30144,32022,33376,33646,35455,36543,41723,45012,46695,47878,48928,50117,51255,52359,52529,53001,58117,58758,59828,64081,64974,
#Partially deleted in new
chr2	151409885	151475388	chr2:151409885-151475388	1	+	151410423	151475071	789624	35	54,114,79,97,128,95,190,93,139,152,118,177,111,63,101,87,71,181,108,150,100,265,43,203,100,120,152,81,55,3237,147,116,154,109,532,	0,528,1374,4937,6675,6921,10304,13064,18898,23191,25577,26941,27355,28798,30141,32019,33373,33643,35452,36540,41720,45009,46692,47875,48925,50114,51252,52356,52526,52998,58114,58755,59825,64078,64971,
#Partially deleted in new
chr2	151409899	151420379	chr2:151409899-151420379	0	+	151409899	151409899	8553170	7	40,114,79,97,128,95,190,	0,514,1360,4923,6661,6907,10290,
#Boundary problem: need 35, got 0, diff 35, mapped 0.0
chr2	151409940	151482172	chr2:151409940-151482172	3	+	151410423	151475071	789624	35	587,79,97,128,95,190,93,139,152,118,177,111,63,101,87,71,181,108,150,100,265,43,203,100,120,152,81,55,3237,147,78,116,154,109,7316,	0,1319,4882,6620,6866,10249,13009,18843,23136,25522,26886,27300,28743,30086,31964,33318,33588,35397,36485,41665,44954,46637,47820,48870,50059,51197,52301,52471,52943,58059,58533,58700,59770,64023,64916,
#Partially deleted in new
chr2	151409955	151455110	chr2:151409955-151455110	0	+	151409955	151455110	789624	21	78,79,97,128,95,190,93,139,152,118,177,111,63,101,87,71,181,108,150,100,216,	0,1304,4867,6605,6851,10234,12994,18828,23121,25507,26871,27285,28728,30071,31949,33303,33573,35382,36470,41650,44939,
#Partially deleted in new
chr2	151410089	151475388	chr2:151410089-151475388	1	+	151410423	151475071	789624	34	438,79,97,128,95,190,93,139,152,118,177,111,63,101,87,71,181,108,150,100,265,43,203,100,120,152,81,55,3237,147,116,154,109,532,	0,1170,4733,6471,6717,10100,12860,18694,22987,25373,26737,27151,28594,29937,31815,33169,33439,35248,36336,41516,44805,46488,47671,48721,49910,51048,52152,52322,52794,57910,58551,59621,63874,64767,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	151420224	151423760	chr2:151420224-151423760	0	+	151420224	151420224	8553170	3	155,93,528,	0,2725,3008,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	151464699	151508013	chr2:151464699-151508013	0	+	151464699	151475071	789624	14	1421,147,78,116,154,109,363,130,137,98,196,152,166,285,	0,3300,3774,3941,5011,9264,10157,15398,18499,30529,34645,38334,41510,43029,
#Partially deleted in new
chr2	151485335	151734487	chr2:151485335-151734487	1	-	151485759	151733156	0	150	598,107,147,93,184,108,93,93,93,93,93,93,93,93,105,105,105,114,111,111,105,105,105,111,105,102,111,111,105,105,105,105,108,105,105,105,105,105,105,105,105,105,111,99,105,105,108,105,108,105,105,198,114,108,105,105,105,198,114,108,105,105,105,312,108,102,99,105,312,105,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,36,168,312,108,105,204,312,108,105,204,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,99,108,198,114,108,105,99,105,108,102,114,108,105,99,105,108,105,117,108,105,105,105,105,105,108,216,42,65,84,90,	0,4635,5036,6347,6762,7051,8017,8439,8825,10940,17457,18013,20142,20830,21573,22669,27397,28244,28982,29482,31123,32982,33629,34322,38975,39179,39827,40622,40822,41582,42145,43874,45658,46456,48879,50355,51796,52536,52804,55008,55361,56111,60552,61009,62093,62298,62972,64300,66402,67336,68062,68492,69595,75256,75668,75872,76774,77275,78270,78487,79708,80165,80380,81832,82735,82980,83282,83932,84745,85161,90359,90815,124473,125180,125426,126850,128940,130666,132028,132939,134115,135583,140198,141666,142187,144203,145379,145807,154557,155019,157238,157429,157814,158482,159132,160794,164840,165238,168656,169934,170481,170817,172647,173729,176799,178212,179165,179423,179997,180754,182468,183691,185687,187033,189141,189951,192229,192540,194385,194582,195394,197326,199442,202083,202290,202956,205391,206528,206723,206925,208987,209186,210242,211301,211812,212014,212208,221545,224320,225098,232080,238046,238924,239521,240117,242355,244279,247785,248376,249062,
#Partially deleted in new
chr2	151485338	151734487	chr2:151485338-151734487	1	-	151485759	151733156	0	149	595,107,147,93,184,108,93,93,93,93,93,93,93,93,105,105,105,114,111,111,105,105,105,111,105,102,111,111,105,105,105,105,108,105,105,105,105,105,105,105,105,105,111,99,105,105,108,105,108,105,105,198,114,108,105,105,105,198,114,108,105,105,105,312,108,102,99,105,312,105,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,99,108,198,114,108,105,99,105,108,102,114,108,105,99,105,108,105,117,108,105,105,105,105,105,108,216,42,65,84,90,	0,4632,5033,6344,6759,7048,8014,8436,8822,10937,17454,18010,20139,20827,21570,22666,27394,28241,28979,29479,31120,32979,33626,34319,38972,39176,39824,40619,40819,41579,42142,43871,45655,46453,48876,50352,51793,52533,52801,55005,55358,56108,60549,61006,62090,62295,62969,64297,66399,67333,68059,68489,69592,75253,75665,75869,76771,77272,78267,78484,79705,80162,80377,81829,82732,82977,83279,83929,84742,85158,90356,90812,124470,125177,125423,126847,128937,130663,132025,132936,134112,135580,140195,141663,142184,144200,145376,154518,155016,157235,157426,157811,158479,159129,160791,164837,165235,168653,169931,170478,170814,172644,173726,176796,178209,179162,179420,179994,180751,182465,183688,185684,187030,189138,189948,192226,192537,194382,194579,195391,197323,199439,202080,202287,202953,205388,206525,206720,206922,208984,209183,210239,211298,211809,212011,212205,221542,224317,225095,232077,238043,238921,239518,240114,242352,244276,247782,248373,249059,
#Partially deleted in new
chr2	151485338	151508042	chr2:151485338-151508042	0	-	151485759	151508042	789624	19	595,107,147,93,184,108,93,93,93,93,93,93,93,93,93,93,93,105,38,	0,4632,5033,6344,6759,7048,8014,8436,8822,10937,11602,12287,12921,17454,18010,20139,20827,21570,22666,
#Partially deleted in new
chr2	151485338	151734487	chr2:151485338-151734487	3	-	151485759	151733156	0	182	595,107,147,93,184,108,93,93,93,93,93,93,93,93,93,93,93,93,93,105,105,105,114,111,111,105,105,105,111,105,102,111,111,105,105,105,105,108,105,105,105,105,105,105,105,105,105,111,99,105,105,108,105,108,105,105,198,114,108,105,105,105,198,114,108,105,105,105,312,108,102,99,105,312,105,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,99,108,198,114,108,105,99,105,108,102,114,108,105,99,105,108,105,117,108,105,105,105,105,105,108,216,42,65,84,90,	0,4632,5033,6344,6759,7048,8014,8436,8822,10937,11602,12287,12921,13959,16052,17454,18010,20139,20827,21570,22666,27394,28241,28979,29479,31120,32979,33626,34319,38972,39176,39824,40619,40819,41579,42142,43871,45655,46453,48103,50352,51793,52533,52801,55005,55358,56108,60549,61006,62090,62295,62969,64297,66399,67333,68059,68489,69592,75253,75665,75869,76771,77272,78267,78484,79705,80162,80377,81829,82732,82977,83279,83929,84742,85158,90356,90812,93999,95458,96144,97125,98116,100168,101066,102035,104550,106009,106695,107677,108668,110721,111619,112588,115103,116562,117248,118230,119221,121267,122165,123134,124470,125177,125423,126847,128937,130663,132025,132936,134112,135580,140195,141663,142184,144200,145376,145804,148315,150888,153941,154518,155016,157235,157426,157811,158479,159129,160791,164837,165235,168653,169931,170478,170814,172644,173726,176796,178209,179162,179420,179994,180751,182465,183688,185684,187030,189138,189948,192226,192537,194382,194579,195391,197323,199439,202080,202287,202953,205388,206525,206720,206922,208984,209183,210239,211298,211809,212011,212205,221542,224317,225095,232077,238043,238921,239518,240114,242352,244276,247782,248373,249059,
#Partially deleted in new
chr2	151485338	151734487	chr2:151485338-151734487	1	-	151485759	151733156	0	182	595,107,147,93,184,108,93,93,93,93,93,93,93,93,93,93,93,93,93,105,105,105,114,111,111,105,105,105,111,105,102,111,111,105,105,105,105,108,105,105,105,105,105,105,105,105,105,111,99,105,105,108,105,108,105,105,198,114,108,105,105,105,198,114,108,105,105,105,312,108,102,99,105,312,105,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,99,108,198,114,108,105,99,105,108,102,114,108,105,99,105,108,105,117,108,105,105,105,105,105,108,216,42,65,84,90,	0,4632,5033,6344,6759,7048,8014,8436,8822,10937,11602,12287,12921,13959,16052,17454,18010,20139,20827,21570,22666,27394,28241,28979,29479,31120,32979,33626,34319,38972,39176,39824,40619,40819,41579,42142,43871,45655,46453,48876,50352,51793,52533,52801,55005,55358,56108,60549,61006,62090,62295,62969,64297,66399,67333,68059,68489,69592,75253,75665,75869,76771,77272,78267,78484,79705,80162,80377,81829,82732,82977,83279,83929,84742,85158,90356,90812,93999,95458,96144,97125,98116,100168,101066,102035,104550,106009,106695,107677,108668,110721,111619,112588,115103,116562,117248,118230,119221,121267,122165,123134,124470,125177,125423,126847,128937,130663,132025,132936,134112,135580,140195,141663,142184,144200,145376,145804,148315,150888,153941,154518,155016,157235,157426,157811,158479,159129,160791,164837,165235,168653,169931,170478,170814,172644,173726,176796,178209,179162,179420,179994,180751,182465,183688,185684,187030,189138,189948,192226,192537,194382,194579,195391,197323,199439,202080,202287,202953,205388,206525,206720,206922,208984,209183,210239,211298,211809,212011,212205,221542,224317,225095,232077,238043,238921,239518,240114,242352,244276,247782,248373,249059,
#Partially deleted in new
chr2	151485338	151734487	chr2:151485338-151734487	1	-	151485759	151733156	789624	183	595,107,147,93,184,108,93,93,93,93,93,93,93,93,93,93,93,93,93,105,105,105,114,111,111,105,105,105,111,105,102,111,111,105,105,105,105,108,105,105,105,105,105,105,105,105,105,105,111,99,105,105,108,105,108,105,105,198,114,108,105,105,105,198,114,108,105,105,105,312,108,102,99,105,312,105,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,99,108,198,114,108,105,99,105,108,102,114,108,105,99,105,108,105,117,108,105,105,105,105,105,108,216,42,65,84,90,	0,4632,5033,6344,6759,7048,8014,8436,8822,10937,11602,12287,12921,13959,16052,17454,18010,20139,20827,21570,22666,27394,28241,28979,29479,31120,32979,33626,34319,38972,39176,39824,40619,40819,41579,42142,43871,45655,46453,48103,48876,50352,51793,52533,52801,55005,55358,56108,60549,61006,62090,62295,62969,64297,66399,67333,68059,68489,69592,75253,75665,75869,76771,77272,78267,78484,79705,80162,80377,81829,82732,82977,83279,83929,84742,85158,90356,90812,93999,95458,96144,97125,98116,100168,101066,102035,104550,106009,106695,107677,108668,110721,111619,112588,115103,116562,117248,118230,119221,121267,122165,123134,124470,125177,125423,126847,128937,130663,132025,132936,134112,135580,140195,141663,142184,144200,145376,145804,148315,150888,153941,154518,155016,157235,157426,157811,158479,159129,160791,164837,165235,168653,169931,170478,170814,172644,173726,176796,178209,179162,179420,179994,180751,182465,183688,185684,187030,189138,189948,192226,192537,194382,194579,195391,197323,199439,202080,202287,202953,205388,206525,206720,206922,208984,209183,210239,211298,211809,212011,212205,221542,224317,225095,232077,238043,238921,239518,240114,242352,244276,247782,248373,249059,
#Partially deleted in new
chr2	151485340	151583619	chr2:151485340-151583619	0	-	151485759	151583619	789624	74	593,107,147,93,184,108,93,93,93,93,93,105,105,105,114,111,111,105,105,105,111,105,102,111,111,105,105,105,105,108,105,105,105,105,105,105,105,105,105,111,99,105,105,108,105,108,105,105,198,114,108,105,105,105,198,114,108,105,105,105,312,108,102,99,105,312,105,105,204,312,108,105,204,165,	0,4630,5031,6342,6757,7046,8820,10935,18008,20137,20825,21568,22664,27392,28239,28977,29477,31118,32977,33624,34317,38970,39174,39822,40617,40817,41577,42140,43869,45653,46451,48874,50350,51791,52531,52799,55003,55356,56106,60547,61004,62088,62293,62967,64295,66397,67331,68057,68487,69590,75251,75663,75867,76769,77270,78265,78482,79703,80160,80375,81827,82730,82975,83277,83927,84740,85156,90354,90810,93997,95456,96142,97123,98114,
#Partially deleted in new
chr2	151485759	151525986	chr2:151485759-151525986	0	-	151485759	151525986	789624	21	174,107,147,93,184,108,93,93,93,105,105,114,111,105,105,105,111,105,102,111,29,	0,4211,4612,5923,6338,6627,8401,19718,20406,22245,26973,27820,28558,30699,32558,33205,33898,38551,38755,39403,40198,
#Partially deleted in new
chr2	151485759	151733156	chr2:151485759-151733156	1	-	151485759	151733156	0	180	174,107,147,93,184,108,93,93,93,93,93,93,93,93,93,93,93,93,93,105,105,105,114,111,111,105,105,105,111,105,102,111,111,105,105,105,105,108,105,105,105,105,105,105,105,105,105,111,99,105,105,108,105,108,105,105,198,114,108,105,105,105,198,114,108,105,105,105,312,108,102,99,105,312,105,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,99,108,198,114,108,105,99,105,108,102,114,108,105,99,105,108,105,117,108,105,105,105,105,105,108,216,42,36,	0,4211,4612,5923,6338,6627,7593,8015,8401,10516,11181,11866,12500,13538,15631,17033,17589,19718,20406,21149,22245,26973,27820,28558,29058,30699,32558,33205,33898,38551,38755,39403,40198,40398,41158,41721,43450,45234,46032,47682,49931,51372,52112,52380,54584,54937,55687,60128,60585,61669,61874,62548,63876,65978,66912,67638,68068,69171,74832,75244,75448,76350,76851,77846,78063,79284,79741,79956,81408,82311,82556,82858,83508,84321,84737,89935,90391,93578,95037,95723,96704,97695,99747,100645,101614,104129,105588,106274,107256,108247,110300,111198,112167,114682,116141,116827,117809,118800,120846,121744,122713,124049,124756,125002,126426,128516,130242,131604,132515,133691,135159,139774,141242,141763,143779,144955,145383,147894,150467,153520,154097,154595,156814,157005,157390,158058,158708,160370,164416,164814,168232,169510,170057,170393,172223,173305,176375,177788,178741,178999,179573,180330,182044,183267,185263,186609,188717,189527,191805,192116,193961,194158,194970,196902,199018,201659,201866,202532,204967,206104,206299,206501,208563,208762,209818,210877,211388,211590,211784,221121,223896,224674,231656,237622,238500,239097,239693,241931,243855,247361,
#Partially deleted in new
chr2	151485759	151733156	chr2:151485759-151733156	1	-	151485759	151733156	0	180	174,107,147,93,184,108,93,93,93,93,93,93,93,93,93,93,93,93,93,105,105,105,114,111,111,105,105,105,111,105,102,111,111,105,105,105,105,108,105,105,105,105,105,105,105,105,105,111,99,105,105,108,105,108,105,105,198,114,108,105,105,105,198,114,108,105,105,105,312,108,102,99,105,312,105,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,204,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,207,312,108,105,99,108,198,114,108,105,99,105,108,102,114,108,105,99,105,108,105,117,108,105,105,105,105,105,108,216,42,36,	0,4211,4612,5923,6338,6627,7593,8015,8401,10516,11181,11866,12500,13538,15631,17033,17589,19718,20406,21149,22245,26973,27820,28558,29058,30699,32558,33205,33898,38551,38755,39403,40198,40398,41158,41721,43450,45234,46032,48455,49931,51372,52112,52380,54584,54937,55687,60128,60585,61669,61874,62548,63876,65978,66912,67638,68068,69171,74832,75244,75448,76350,76851,77846,78063,79284,79741,79956,81408,82311,82556,82858,83508,84321,84737,89935,90391,93578,95037,95723,96704,97695,99747,100645,101614,104129,105588,106274,107256,108247,110300,111198,112167,114682,116141,116827,117809,118800,120846,121744,122713,124049,124756,125002,126426,128516,130242,131604,132515,133691,135159,139774,141242,141763,143779,144955,145383,147894,150467,153520,154097,154595,156814,157005,157390,158058,158708,160370,164416,164814,168232,169510,170057,170393,172223,173305,176375,177788,178741,178999,179573,180330,182044,183267,185263,186609,188717,189527,191805,192116,193961,194158,194970,196902,199018,201659,201866,202532,204967,206104,206299,206501,208563,208762,209818,210877,211388,211590,211784,221121,223896,224674,231656,237622,238500,239097,239693,241931,243855,247361,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	151486276	151498213	chr2:151486276-151498213	0	+	151486276	151486276	8553170	3	480,98,428,	0,8952,11509,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	151491206	151493296	chr2:151491206-151493296	0	-	151491206	151491206	8553170	2	1075,910,	0,1180,
#Partially deleted in new
chr2	151492098	151506947	chr2:151492098-151506947	0	-	151492098	151492098	8553170	5	183,108,93,93,39,	0,288,13379,14067,14810,
#Partially deleted in new
chr2	151493352	151506993	chr2:151493352-151506993	0	-	151493352	151506993	789624	13	93,93,93,93,93,93,93,93,93,93,93,93,85,	0,422,808,2923,3588,4273,4907,8038,9440,9996,12125,12813,13556,
#Partially deleted in new
chr2	151494974	151498215	chr2:151494974-151498215	0	+	151494974	151494974	8553170	2	352,430,	0,2811,
#Partially deleted in new
chr2	151496304	151513606	chr2:151496304-151513606	0	-	151496304	151513606	789624	9	64,93,93,93,93,93,105,105,27,	0,636,6488,7044,9173,9861,10604,16428,17275,
#Deleted in new
chr2	151505947	151507112	chr2:151505947-151507112	0	+	151505947	151505947	8553170	2	428,117,	0,1048,
#Partially deleted in new
chr2	151516458	151519985	chr2:151516458-151519985	0	-	151516458	151516458	8553170	4	105,105,105,328,	0,1859,2506,3199,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	151530640	151532163	chr2:151530640-151532163	0	-	151530640	151530640	8553170	2	461,372,	0,1151,
#Partially deleted in new
chr2	151531826	151540747	chr2:151531826-151540747	0	-	151531826	151540747	789624	8	70,105,105,105,105,105,105,51,	0,1615,3864,5305,6045,6313,8517,8870,
#Partially deleted in new
chr2	151615878	151617485	chr2:151615878-151617485	0	-	151615878	151615878	8553170	2	231,122,	0,1485,
#Deleted in new
chr2	151667834	151671380	chr2:151667834-151671380	0	-	151667834	151667834	8553170	3	77,105,358,	0,1192,3188,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	151689197	151706931	chr2:151689197-151706931	0	-	151689197	151689197	8553170	12	1628,105,108,102,114,108,105,99,105,108,105,51,	0,2666,2861,3063,5125,5324,6380,7439,7950,8152,8346,17683,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	151788983	151791790	chr2:151788983-151791790	0	-	151788983	151788983	8553170	3	264,131,33,	0,768,2774,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	151789077	151828441	chr2:151789077-151828441	0	-	151803275	151814312	0	9	170,131,151,318,152,84,148,61,53,	0,674,2680,13929,17743,23279,25091,26061,39311,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	151789634	151792086	chr2:151789634-151792086	0	-	151789634	151789634	8553170	2	248,329,	0,2123,
#Partially deleted in new
chr2	151798801	151828488	chr2:151798801-151828488	3	-	151803275	151828176	0	6	4523,152,84,148,61,358,	0,8019,13555,15367,16337,29329,
#Partially deleted in new
chr2	151802650	151842014	chr2:151802650-151842014	0	-	151841718	151842014	789624	7	674,152,84,148,61,72,112,	0,4170,9706,11518,12488,39017,39252,
#Partially deleted in new
chr2	151802826	151973923	chr2:151802826-151973923	0	-	151869645	151971550	789624	17	498,152,84,148,61,96,152,110,559,81,20,77,131,123,120,160,255,	0,3994,9530,11342,12312,50621,52397,57884,66350,67704,68015,69590,73599,77973,80424,168718,170842,
#Partially deleted in new
chr2	151802981	151828492	chr2:151802981-151828492	0	-	151810555	151814312	789624	7	343,152,184,84,148,61,104,	0,3839,7396,9375,11187,12157,25407,
#Partially deleted in new
chr2	151803102	151828468	chr2:151803102-151828468	1	-	151803275	151814312	0	6	222,152,84,148,61,80,	0,3718,9254,11066,12036,25286,
#Partially deleted in new
chr2	151814271	151973949	chr2:151814271-151973949	3	-	151855273	151973713	789624	12	45,61,186,96,152,81,20,77,131,123,120,281,	0,867,27631,39176,40952,56259,56570,58145,62154,66528,68979,159397,
#Deleted in new
chr2	151827479	151828465	chr2:151827479-151828465	0	-	151827479	151827479	8553170	2	361,335,	0,651,
#Partially deleted in new
chr2	151832767	152099475	chr2:151832767-152099475	1	-	151839118	152099011	0	14	6612,186,96,152,110,59,81,20,77,131,123,120,84,527,	0,9135,20680,22456,27943,36409,37763,38074,39649,43658,48032,50483,265562,266181,
#Partially deleted in new
chr2	151832803	151973933	chr2:151832803-151973933	1	-	151839118	151971550	789624	9	6576,186,20,77,131,123,120,160,265,	0,9099,38038,39613,43622,47996,50447,138741,140865,
#Partially deleted in new
chr2	151832811	151973933	chr2:151832811-151973933	1	-	151839118	151973713	789624	11	6568,152,110,59,81,20,77,131,123,120,265,	0,22412,27899,36365,37719,38030,39605,43614,47988,50439,140857,
#Partially deleted in new
chr2	151832819	151973947	chr2:151832819-151973947	0	-	151860793	151973713	789624	11	6560,186,96,152,110,20,77,131,123,120,279,	0,9083,20628,22404,27891,38022,39597,43606,47980,50431,140849,
#Partially deleted in new
chr2	151832863	151971988	chr2:151832863-151971988	1	-	151839118	151971550	789624	13	6516,96,152,110,59,81,20,77,131,123,120,160,103,	0,20584,22360,27847,36313,37667,37978,39553,43562,47936,50387,138681,139022,
#Partially deleted in new
chr2	151832865	151974027	chr2:151832865-151974027	1	-	151839118	151971550	789624	14	6514,186,96,152,110,59,81,20,77,131,123,120,160,359,	0,9037,20582,22358,27845,36311,37665,37976,39551,43560,47934,50385,138679,140803,
#Partially deleted in new
chr2	151832884	152099167	chr2:151832884-152099167	1	-	151839366	152099011	789624	10	6495,59,81,20,77,131,123,120,84,219,	0,36292,37646,37957,39532,43541,47915,50366,265445,266064,
#Partially deleted in new
chr2	151832908	151973798	chr2:151832908-151973798	1	-	151839118	151973713	789624	12	6471,186,117,152,110,59,81,20,77,131,120,130,	0,8994,20539,22315,27802,36268,37622,37933,39508,43517,50342,140760,
#Partially deleted in new
chr2	151832967	151971785	chr2:151832967-151971785	1	-	151839118	151971550	789624	13	6412,186,96,152,110,59,81,20,77,131,123,120,241,	0,8935,20480,22256,27743,36209,37563,37874,39449,43458,47832,50283,138577,
#Partially deleted in new
chr2	151833818	151973931	chr2:151833818-151973931	0	-	151833818	151833818	8553170	9	5561,186,96,152,1963,131,123,120,263,	0,8084,19629,21405,36712,42607,46981,49432,139850,
#Partially deleted in new
chr2	151834819	151973947	chr2:151834819-151973947	1	-	151839118	151973713	789624	9	4560,186,96,152,110,131,123,120,279,	0,7083,18628,20404,25891,41606,45980,48431,138849,
#Partially deleted in new
chr2	151836103	151860755	chr2:151836103-151860755	0	-	151839329	151860755	789624	4	3274,96,152,45,	0,17344,19120,24607,
#Partially deleted in new
chr2	151836207	152098844	chr2:151836207-152098844	3	-	151839118	152098649	0	14	3172,186,96,152,110,59,81,20,77,131,123,120,84,204,	0,5695,17240,19016,24503,32969,34323,34634,36209,40218,44592,47043,262122,262433,
#Partially deleted in new
chr2	151836233	151973954	chr2:151836233-151973954	0	-	151860793	151971550	789624	13	3146,186,96,152,110,81,20,77,131,123,120,160,286,	0,5669,17214,18990,24477,34297,34608,36183,40192,44566,47017,135311,137435,
#Partially deleted in new
chr2	151836354	151973947	chr2:151836354-151973947	0	-	151842030	151971550	789624	7	3025,186,131,123,120,160,279,	0,5548,40071,44445,46896,135190,137314,
#Partially deleted in new
chr2	151836410	151973891	chr2:151836410-151973891	0	-	151855273	151872456	789624	13	2969,186,96,152,81,20,77,131,123,120,146,160,223,	0,5492,17037,18813,34120,34431,36006,40015,44389,46840,133870,135134,137258,
#Partially deleted in new
chr2	151836433	152098810	chr2:151836433-152098810	1	-	151839118	152098649	789624	13	2946,186,96,152,110,59,81,20,77,131,120,84,170,	0,5469,17014,18790,24277,32743,34097,34408,35983,39992,46817,261896,262207,
#Partially deleted in new
chr2	151836481	152098707	chr2:151836481-152098707	1	-	151839118	152098649	789624	10	2898,186,81,20,77,131,123,120,84,67,	0,5421,34049,34360,35935,39944,44318,46769,261848,262159,
#Partially deleted in new
chr2	151836567	151973948	chr2:151836567-151973948	1	-	151839118	151973713	789624	12	2812,96,152,110,59,81,20,77,131,123,120,280,	0,16880,18656,24143,32609,33963,34274,35849,39858,44232,46683,137101,
#Partially deleted in new
chr2	151836675	151973978	chr2:151836675-151973978	1	-	151839118	151971550	789624	13	2704,96,152,110,59,81,20,77,131,123,120,160,310,	0,16772,18548,24035,32501,33855,34166,35741,39750,44124,46575,134869,136993,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	151836812	151861729	chr2:151836812-151861729	0	-	151836812	151836812	8553170	5	2567,186,96,152,1019,	0,5090,16635,18411,23898,
#Partially deleted in new
chr2	151836932	151973952	chr2:151836932-151973952	0	-	151855273	151971550	789624	12	2447,186,96,152,81,20,77,131,123,120,160,284,	0,4970,16515,18291,33598,33909,35484,39493,43867,46318,134612,136736,
#Partially deleted in new
chr2	151837205	151973928	chr2:151837205-151973928	1	-	151839118	151971550	789624	15	2174,186,96,152,110,59,81,20,77,51,131,123,120,160,260,	0,4697,16242,18018,23505,31971,33325,33636,35211,37714,39220,43594,46045,134339,136463,
#Partially deleted in new
chr2	151837216	151973983	chr2:151837216-151973983	0	-	151842030	151973713	789624	6	2163,186,131,123,120,315,	0,4686,39209,43583,46034,136452,
#Partially deleted in new
chr2	151837284	151973923	chr2:151837284-151973923	0	-	151869203	151973713	789624	12	2095,186,96,152,110,59,81,77,131,123,120,255,	0,4618,16163,17939,23426,31892,33246,35132,39141,43515,45966,136384,
#Partially deleted in new
chr2	151837286	151973873	chr2:151837286-151973873	0	-	151883335	151973713	789624	14	2093,186,96,152,110,59,81,20,77,131,123,120,67,205,	0,4616,16161,17937,23424,31890,33244,33555,35130,39139,43513,45964,125558,136382,
#Partially deleted in new
chr2	151837357	151973971	chr2:151837357-151973971	0	-	151837357	151837357	8553170	11	2022,186,96,152,81,20,77,131,120,207,303,	0,4545,16090,17866,33173,33484,35059,39068,45893,98848,136311,
#Partially deleted in new
chr2	151837542	152098714	chr2:151837542-152098714	0	-	151870861	152098649	789624	14	1837,186,96,152,110,59,81,61,77,131,123,120,84,74,	0,4360,15905,17681,23168,31634,32988,33299,34874,38883,43257,45708,260787,261098,
#Partially deleted in new
chr2	151838494	151973997	chr2:151838494-151973997	1	-	151839118	151973713	0	13	885,186,96,152,110,59,81,20,77,131,123,120,329,	0,3408,14953,16729,22216,30682,32036,32347,33922,37931,42305,44756,135174,
#Partially deleted in new
chr2	151838632	152098461	chr2:151838632-152098461	0	-	151838632	151838632	8553170	13	747,186,96,152,110,59,81,20,77,131,123,120,132,	0,3270,14815,16591,22078,30544,31898,32209,33784,37793,42167,44618,259697,
#Partially deleted in new
chr2	151838683	151973934	chr2:151838683-151973934	1	-	151839118	151872456	789624	15	696,186,96,152,110,59,81,20,77,131,123,120,146,160,266,	0,3219,14764,16540,22027,30493,31847,32158,33733,37742,42116,44567,131597,132861,134985,
#Partially deleted in new
chr2	151838702	151972052	chr2:151838702-151972052	1	-	151839118	151971550	789624	14	677,186,96,152,110,59,81,20,77,131,123,120,160,167,	0,3200,14745,16521,22008,30474,31828,32139,33714,37723,42097,44548,132842,133183,
#Partially deleted in new
chr2	151838705	151973933	chr2:151838705-151973933	0	-	151838705	151838705	8553170	13	674,186,96,152,110,1435,20,77,131,123,120,160,265,	0,3197,14742,16518,22005,30471,32136,33711,37720,42094,44545,132839,134963,
#Partially deleted in new
chr2	151838706	151973978	chr2:151838706-151973978	1	-	151839118	151973713	789624	12	673,186,96,152,110,59,81,20,77,131,120,310,	0,3196,14741,16517,22004,30470,31824,32135,33710,37719,44544,134962,
#Partially deleted in new
chr2	151838751	151973933	chr2:151838751-151973933	1	-	151839118	151971550	789624	13	628,186,152,110,59,81,20,77,131,123,120,160,265,	0,3151,16472,21959,30425,31779,32090,33665,37674,42048,44499,132793,134917,
#Partially deleted in new
chr2	151838757	151973933	chr2:151838757-151973933	0	-	151971628	151973713	789624	13	622,186,152,110,59,81,20,77,131,123,120,156,265,	0,3145,16466,21953,30419,31773,32084,33659,37668,42042,44493,132787,134911,
#Partially deleted in new
chr2	151838781	151973970	chr2:151838781-151973970	1	-	151839118	151971550	789624	11	598,186,96,152,81,77,131,123,120,160,302,	0,3121,14666,16442,31749,33635,37644,42018,44469,132763,134887,
#Partially deleted in new
chr2	151838804	152099033	chr2:151838804-152099033	1	-	151839118	152099011	789624	13	575,186,96,152,110,59,81,20,77,131,120,84,85,	0,3098,14643,16419,21906,30372,31726,32037,33612,37621,44446,259525,260144,
#Partially deleted in new
chr2	151838814	151973933	chr2:151838814-151973933	1	-	151839118	151971550	789624	9	565,81,20,77,131,123,120,160,265,	0,31716,32027,33602,37611,41985,44436,132730,134854,
#Partially deleted in new
chr2	151838826	151973923	chr2:151838826-151973923	0	-	151855273	151973713	789624	10	553,186,152,81,20,77,131,123,120,255,	0,3076,16397,31704,32015,33590,37599,41973,44424,134842,
#Partially deleted in new
chr2	151838833	151973928	chr2:151838833-151973928	1	-	151839118	151973713	789624	10	546,186,96,152,81,77,131,123,120,260,	0,3069,14614,16390,31697,33583,37592,41966,44417,134835,
#Partially deleted in new
chr2	151838837	151973933	chr2:151838837-151973933	1	-	151839118	151971550	789624	9	542,186,152,77,131,123,120,160,265,	0,3065,16386,33579,37588,41962,44413,132707,134831,
#Partially deleted in new
chr2	151838865	151973954	chr2:151838865-151973954	1	-	151839118	151971550	789624	10	514,186,81,20,77,131,123,120,160,286,	0,3037,31665,31976,33551,37560,41934,44385,132679,134803,
#Partially deleted in new
chr2	151838932	151973966	chr2:151838932-151973966	0	-	151855273	151973713	789624	11	447,186,96,152,81,20,77,131,123,120,298,	0,2970,14515,16291,31598,31909,33484,37493,41867,44318,134736,
#Partially deleted in new
chr2	151838989	151973933	chr2:151838989-151973933	0	-	151860793	151973713	789624	12	390,186,96,152,110,81,20,77,131,123,120,265,	0,2913,14458,16234,21721,31541,31852,33427,37436,41810,44261,134679,
#Partially deleted in new
chr2	151838990	151974051	chr2:151838990-151974051	1	-	151839118	151973713	789624	13	389,186,96,152,110,17,81,20,77,131,123,120,383,	0,2912,14457,16233,21720,30186,31540,31851,33426,37435,41809,44260,134678,
#Partially deleted in new
chr2	151838990	151973908	chr2:151838990-151973908	0	-	151869645	151971550	789624	14	389,186,96,152,110,559,81,20,77,131,123,120,160,240,	0,2912,14457,16233,21720,30186,31540,31851,33426,37435,41809,44260,132554,134678,
#Partially deleted in new
chr2	151838990	151973933	chr2:151838990-151973933	0	-	151838990	151838990	8553170	12	389,186,96,152,110,59,1963,131,123,120,160,265,	0,2912,14457,16233,21720,30186,31540,37435,41809,44260,132554,134678,
#Partially deleted in new
chr2	151838990	151973933	chr2:151838990-151973933	0	-	151838990	151838990	8553170	12	389,186,96,152,110,1435,20,77,131,123,120,265,	0,2912,14457,16233,21720,30186,31851,33426,37435,41809,44260,134678,
#Partially deleted in new
chr2	151839000	151973780	chr2:151839000-151973780	1	-	151839118	151872456	789624	15	379,186,96,152,110,59,81,20,77,131,123,120,74,160,112,	0,2902,14447,16223,21710,30176,31530,31841,33416,37425,41799,44250,128536,132544,134668,
#Partially deleted in new
chr2	151839000	151973940	chr2:151839000-151973940	0	-	151860809	151973713	789624	10	379,186,96,152,110,77,131,123,120,272,	0,2902,14447,16223,21710,33416,37425,41799,44250,134668,
#Partially deleted in new
chr2	151839027	151971748	chr2:151839027-151971748	0	-	151855273	151872456	789624	11	352,96,152,81,20,77,131,123,120,74,204,	0,14420,16196,31503,31814,33389,37398,41772,44223,128509,132517,
#Partially deleted in new
chr2	151839028	151880831	chr2:151839028-151880831	0	-	151842077	151880831	789624	6	351,186,81,77,131,32,	0,2874,31502,33388,37397,41771,
#Partially deleted in new
chr2	151839038	151971988	chr2:151839038-151971988	0	-	151841718	151971550	789624	15	341,72,186,96,152,110,59,81,20,77,131,123,120,160,103,	0,2629,2864,14409,16185,21672,30138,31492,31803,33378,37387,41761,44212,132506,132847,
#Partially deleted in new
chr2	151839043	151973933	chr2:151839043-151973933	0	-	151839043	151839043	8553170	11	336,186,152,110,1435,20,77,131,123,120,265,	0,2859,16180,21667,30133,31798,33373,37382,41756,44207,134625,
#Partially deleted in new
chr2	151839118	152099023	chr2:151839118-152099023	1	-	151839118	152099011	0	13	261,96,152,110,59,81,20,77,131,123,120,84,75,	0,14329,16105,21592,30058,31412,31723,33298,37307,41681,44132,259211,259830,
#Partially deleted in new
chr2	151841933	151973933	chr2:151841933-151973933	0	-	151841933	151841933	8553170	10	155,96,152,110,59,1963,131,123,120,265,	0,11514,13290,18777,27243,28597,34492,38866,41317,131735,
#Partially deleted in new
chr2	151841981	151973980	chr2:151841981-151973980	0	-	151841981	151973713	789624	11	107,152,110,59,81,20,77,131,123,120,312,	0,13242,18729,27195,28549,28860,30435,34444,38818,41269,131687,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	151850180	151854479	chr2:151850180-151854479	0	-	151850180	151850180	8553170	1	4299,	0,
#Partially deleted in new
chr2	151853474	151876494	chr2:151853474-151876494	0	-	151860809	151876494	789624	6	69,152,110,81,77,69,	0,1749,7236,17056,18942,22951,
#Partially deleted in new
chr2	151854851	151973772	chr2:151854851-151973772	0	-	151854851	151854851	8553170	8	524,110,3317,131,123,120,160,104,	0,5859,14325,21574,25948,28399,116693,118817,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	151856647	151973933	chr2:151856647-151973933	0	-	151856647	151856647	8553170	10	4173,59,81,20,77,131,123,120,160,265,	0,12529,13883,14194,15769,19778,24152,26603,114897,117021,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	151865786	151973947	chr2:151865786-151973947	1	-	151870203	151973713	789624	7	4825,20,77,131,123,120,279,	0,5055,6630,10639,15013,17464,107882,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	151865902	151874135	chr2:151865902-151874135	0	-	151865902	151865902	8553170	1	8233,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	151866027	152099140	chr2:151866027-152099140	0	-	151866027	151866027	8553170	9	3208,81,20,77,131,123,120,84,192,	0,4503,4814,6389,10398,14772,17223,232302,232921,
#Partially deleted in new
chr2	151868913	152098670	chr2:151868913-152098670	1	-	151870203	152098649	789624	8	1698,20,77,131,123,120,84,30,	0,1928,3503,7512,11886,14337,229416,229727,
#Partially deleted in new
chr2	151870237	151880822	chr2:151870237-151880822	0	-	151870468	151880822	789624	4	374,77,131,23,	0,2179,6188,10562,
#Partially deleted in new
chr2	151870588	151973857	chr2:151870588-151973857	0	-	151870588	151971550	789624	7	23,20,77,131,120,160,189,	0,253,1828,5837,12662,100956,103080,
#Partially deleted in new
chr2	151870841	152048789	chr2:151870841-152048789	0	-	151870841	151870841	8553170	6	20,77,131,123,120,274,	0,1575,5584,9958,12409,177674,
#Partially deleted in new
chr2	151879514	151973947	chr2:151879514-151973947	0	-	151879514	151879514	8553170	3	1408,120,279,	0,3736,94154,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	151882992	151884166	chr2:151882992-151884166	0	-	151882992	151882992	8553170	1	1174,	0,
#Partially deleted in new
chr2	151883255	152098711	chr2:151883255-152098711	0	-	151883255	151971550	789624	4	115,160,84,71,	0,88289,215074,215385,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	151967082	151973931	chr2:151967082-151973931	0	-	151967082	151967082	8553170	1	6849,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	151967125	151973947	chr2:151967125-151973947	0	-	151967125	151967125	8553170	2	4579,279,	0,6543,
#Partially deleted in new
chr2	152098327	152109202	chr2:152098327-152109202	3	+	152098327	152098327	8553170	2	120,387,	0,10488,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	152116800	152175992	chr2:152116800-152175992	3	-	152120573	152175642	0	14	4002,170,154,55,88,83,95,187,70,147,99,76,85,390,	0,6965,9425,15313,16372,16601,18708,27026,28087,30361,31223,31424,33344,58802,
#Partially deleted in new
chr2	152120431	152124686	chr2:152120431-152124686	0	-	152120431	152120431	8553170	2	371,921,	0,3334,
#Partially deleted in new
chr2	152126003	152175729	chr2:152126003-152175729	0	-	152126003	152126003	8553170	12	376,55,88,83,95,187,70,147,99,76,85,127,	0,6110,7169,7398,9505,17823,18884,21158,22020,22221,24141,49599,
#Deleted in new
chr2	152131554	152131845	chr2:152131554-152131845	7	+	152131554	152131554	16724991	1	291,	0,
#Partially deleted in new
chr2	152131881	152175749	chr2:152131881-152175749	0	-	152131881	152131881	8553170	11	287,88,83,95,187,70,147,99,76,85,147,	0,1291,1520,3627,11945,13006,15280,16142,16343,18263,43721,
#Partially deleted in new
chr2	152143988	152175741	chr2:152143988-152175741	0	-	152143988	152143988	8553170	6	25,70,147,99,76,139,	0,899,3173,4035,4236,31614,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	152284349	152284460	chr2:152284349-152284460	3	-	152284349	152284349	8553170	1	111,	0,
#Partially deleted in new
chr2	152335236	152649834	chr2:152335236-152649834	3	+	152335603	152647905	789624	26	484,84,81,77,84,153,109,77,94,75,111,150,102,313,210,125,203,235,69,81,130,164,102,99,124,2039,	0,186706,207502,213784,223503,225646,239899,243651,245719,272102,276258,279614,281854,283609,284272,290201,291288,293062,294419,294588,296771,301190,302336,304721,305554,312559,
#Deleted in new
chr2	152389936	152390630	chr2:152389936-152390630	7	+	152389936	152389936	16724991	1	694,	0,
#Deleted in new
chr2	152539196	152539427	chr2:152539196-152539427	7	-	152539196	152539196	16724991	1	231,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	152578620	152607653	chr2:152578620-152607653	0	+	152578620	152578620	8553170	3	344,94,315,	0,2335,28718,
#Partially deleted in new
chr2	152619577	152649823	chr2:152619577-152649823	1	+	152625475	152643510	789624	14	141,21,125,203,235,69,81,130,164,102,99,124,126,2028,	0,2959,5860,6947,8721,10078,10247,12430,16849,17995,20380,21213,23841,28218,
#Partially deleted in new
chr2	152625147	152626704	chr2:152625147-152626704	0	+	152625147	152625147	8553170	2	415,180,	0,1377,
#Partially deleted in new
chr2	152651592	152717981	chr2:152651592-152717981	1	-	152656305	152717631	789624	26	4806,132,62,97,87,96,138,117,92,115,134,151,109,165,65,109,375,25,54,121,111,17,31,81,132,626,	0,6296,7355,7500,7677,11010,11442,12062,12283,12545,17544,18638,19680,20866,21385,22005,24812,25858,27463,27759,29633,39369,41445,42949,64402,65763,
#Partially deleted in new
chr2	152656305	152717461	chr2:152656305-152717461	3	-	152656305	152717439	789624	26	93,132,62,97,87,96,138,117,92,115,134,151,109,165,65,109,375,25,54,121,111,17,31,81,132,106,	0,1583,2642,2787,2964,6297,6729,7349,7570,7832,12831,13925,14967,16153,16672,17292,20099,21145,22750,23046,24920,34656,36732,38236,59689,61050,
#Deleted in new
chr2	152657884	152659104	chr2:152657884-152659104	0	-	152657884	152657884	8553170	2	136,157,	0,1063,
#Deleted in new
chr2	152657954	152659377	chr2:152657954-152659377	0	-	152657954	152657954	8553170	4	66,62,97,108,	0,993,1138,1315,
#Partially deleted in new
chr2	152663130	152663855	chr2:152663130-152663855	0	-	152663130	152663130	8553170	2	42,201,	0,524,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	152672547	152717461	chr2:152672547-152717461	0	-	152693467	152717461	789624	14	76,65,109,375,25,54,121,111,17,31,319,81,132,106,	0,430,1050,3857,4903,6508,6804,8678,18414,20490,20610,21994,43447,44808,
#Partially deleted in new
chr2	152672564	152717407	chr2:152672564-152717407	0	-	152672564	152717394	789624	13	59,65,109,375,25,54,121,111,17,31,81,132,178,	0,413,1033,3840,4886,6491,6787,8661,18397,20473,21977,43430,44665,
#Partially deleted in new
chr2	152676398	152717373	chr2:152676398-152717373	0	-	152676400	152717373	789624	9	381,25,121,111,17,31,81,132,144,	0,1052,2953,4827,14563,16639,18143,39596,40831,
#Partially deleted in new
chr2	152679055	152717457	chr2:152679055-152717457	0	-	152679055	152717457	789624	5	54,121,81,132,102,	0,296,15486,36939,38300,
#Partially deleted in new
chr2	152679128	152693111	chr2:152679128-152693111	0	-	152679128	152679128	8553170	4	344,111,17,74,	0,2097,11833,13909,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	152694062	152716130	chr2:152694062-152716130	0	-	152694062	152694062	8553170	3	560,80,136,	0,20487,21932,
#Partially deleted in new
chr2	152694436	152717932	chr2:152694436-152717932	0	-	152694436	152694436	8553170	4	186,132,76,102,	0,21558,22919,23394,
#Deleted in new
chr2	152715994	152717997	chr2:152715994-152717997	0	-	152715994	152715994	8553170	3	132,270,167,	0,1361,1836,
#Partially deleted in new
chr2	152717892	152760764	chr2:152717892-152760764	0	+	152717892	152717892	789624	4	103,54,133,1018,	0,2640,17101,41854,
#Partially deleted in new
chr2	152717913	152761253	chr2:152717913-152761253	3	+	152718624	152759840	789624	4	1111,54,133,1507,	0,2619,17080,41833,
#Partially deleted in new
chr2	152718918	152759882	chr2:152718918-152759882	0	+	152718918	152732571	789624	5	106,54,50,133,136,	0,1614,13612,16075,40828,
#Partially deleted in new
chr2	152718958	152759851	chr2:152718958-152759851	0	+	152718958	152719947	789624	5	66,107,54,133,105,	0,939,1574,16035,40788,
#Partially deleted in new
chr2	152720166	152760595	chr2:152720166-152760595	0	+	152720166	152720166	8553170	3	420,133,849,	0,14827,39580,
#Deleted in new
chr2	152850652	152850824	chr2:152850652-152850824	7	-	152850652	152850652	16724991	1	172,	0,
#Deleted in new
chr2	152876819	152877767	chr2:152876819-152877767	7	+	152876819	152876819	16724991	1	948,	0,
#Deleted in new
chr2	153158937	153159683	chr2:153158937-153159683	7	+	153158937	153158937	16724991	1	746,	0,
#Partially deleted in new
chr2	153171986	153201726	chr2:153171986-153201726	3	-	153171986	153171986	8553170	4	120,115,118,30,	0,1229,15465,29710,
#Deleted in new
chr2	153208085	153208163	chr2:153208085-153208163	7	-	153208085	153208085	16724991	1	78,	0,
#Partially deleted in new
chr2	153337704	153357422	chr2:153337704-153357422	3	+	153337704	153337704	8553170	4	76,57,57,167,	0,16520,18831,19551,
#Deleted in new
chr2	153370611	153371064	chr2:153370611-153371064	7	+	153370611	153370611	16724991	1	453,	0,
#Deleted in new
chr2	153420676	153421957	chr2:153420676-153421957	7	-	153420676	153420676	16724991	1	1281,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	153421615	153449820	chr2:153421615-153449820	1	-	153421615	153421615	8553170	3	348,57,150,	0,1820,28055,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	153421684	153449818	chr2:153421684-153449818	0	-	153421684	153421684	8553170	2	279,148,	0,27986,
#Deleted in new
chr2	153446812	153446883	chr2:153446812-153446883	3	-	153446812	153446812	8553170	1	71,	0,
#Deleted in new
chr2	153477337	153478808	chr2:153477337-153478808	3	-	153478235	153478565	789624	1	1471,	0,
#Deleted in new
chr2	153761449	153762646	chr2:153761449-153762646	7	-	153761449	153761449	16724991	1	1197,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	153871912	154453849	chr2:153871912-154453849	3	+	153944497	154450551	789624	13	391,72,246,169,167,208,171,118,181,140,99,135,3439,	0,29023,72481,268424,370117,370785,373899,387108,429496,524078,537071,566679,578498,
#Partially deleted in new
chr2	153944497	154451303	chr2:153944497-154451303	1	+	153944497	154446753	789624	12	142,169,167,208,171,118,181,140,99,135,168,893,	0,195839,297532,298200,301314,314523,356911,451493,464486,494094,502100,505913,
#Partially deleted in new
chr2	154140340	154409340	chr2:154140340-154409340	0	+	154140340	154236049	789624	9	165,135,167,208,171,118,181,140,357,	0,95705,101689,102357,105471,118680,161068,255650,268643,
#Partially deleted in new
chr2	154257566	154438676	chr2:154257566-154438676	0	+	154257566	154257566	8553170	6	159,118,181,140,99,85,	0,1454,43842,138424,151417,181025,
#Deleted in new
chr2	154286588	154287425	chr2:154286588-154287425	7	+	154286588	154286588	16724991	1	837,	0,
#Partially deleted in new
chr2	154301578	154450730	chr2:154301578-154450730	0	+	154301578	154450551	789624	4	11,140,135,320,	0,94412,137013,148832,
#Partially deleted in new
chr2	154409010	154450793	chr2:154409010-154450793	0	+	154409010	154438719	789624	3	72,73,383,	0,29643,41400,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	154435852	154457438	chr2:154435852-154457438	3	-	154435852	154435852	8553170	5	1998,78,105,108,73,	0,9955,18685,20944,21513,
#Partially deleted in new
chr2	154438591	154450745	chr2:154438591-154450745	0	+	154438591	154446753	789624	3	135,198,335,	0,7976,11819,
#Partially deleted in new
chr2	154441720	154450801	chr2:154441720-154450801	0	+	154441720	154441720	8553170	2	92,391,	0,8690,
#Partially deleted in new
chr2	154446477	154450694	chr2:154446477-154450694	0	+	154446477	154446477	8553170	2	288,284,	0,3933,
#Deleted in new
chr2	154459856	154460820	chr2:154459856-154460820	3	+	154459856	154459856	8553170	2	254,257,	0,707,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	154590406	154590528	chr2:154590406-154590528	7	+	154590406	154590406	16724991	1	122,	0,
#Deleted in new
chr2	154696461	154697817	chr2:154696461-154697817	3	-	154696461	154696461	8553170	2	281,151,	0,1205,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	154698298	154858351	chr2:154698298-154858351	3	+	154698775	154855313	789624	3	1179,217,3625,	0,11304,156428,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	154698580	154858352	chr2:154698580-154858352	1	+	154698775	154854732	789624	2	897,3626,	0,156146,
#Partially deleted in new
chr2	154709331	154855028	chr2:154709331-154855028	0	+	154709331	154709331	8553170	3	45,217,302,	0,271,145395,
#Deleted in new
chr2	154940540	154941067	chr2:154940540-154941067	7	-	154940540	154940540	16724991	1	527,	0,
#Partially deleted in new
chr2	154965512	154968003	chr2:154965512-154968003	3	-	154965512	154965512	8553170	2	176,217,	0,2274,
#Deleted in new
chr2	155089438	155089538	chr2:155089438-155089538	3	-	155089438	155089438	8553170	1	100,	0,
#Partially deleted in new
chr2	155263457	155263724	chr2:155263457-155263724	7	-	155263457	155263457	16724991	1	267,	0,
#Partially deleted in new
chr2	155264162	155264823	chr2:155264162-155264823	7	-	155264162	155264162	16724991	1	661,	0,
#Partially deleted in new
chr2	155269632	155269887	chr2:155269632-155269887	5	+	155269632	155269632	16724991	1	255,	0,
#Partially deleted in new
chr2	155269691	155270134	chr2:155269691-155270134	7	+	155269691	155269691	16724991	1	443,	0,
#Deleted in new
chr2	155311022	155311409	chr2:155311022-155311409	7	+	155311022	155311022	16724991	1	387,	0,
#Deleted in new
chr2	155311696	155313427	chr2:155311696-155313427	7	+	155311696	155311696	16724991	1	1731,	0,
#Deleted in new
chr2	155313439	155313958	chr2:155313439-155313958	7	-	155313439	155313439	16724991	1	519,	0,
#Deleted in new
chr2	155314065	155314368	chr2:155314065-155314368	7	+	155314065	155314065	16724991	1	303,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	155330420	155330527	chr2:155330420-155330527	3	+	155330420	155330420	8553170	1	107,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	156011529	156254929	chr2:156011529-156254929	0	-	156011529	156011529	8553170	5	323,156,146,107,152,	0,10214,11142,12940,243248,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	156011616	156024613	chr2:156011616-156024613	0	-	156011616	156011616	8553170	5	236,111,156,146,148,	0,2056,10127,11055,12849,
#Partially deleted in new
chr2	156020534	156024576	chr2:156020534-156024576	0	-	156020534	156020534	789624	3	1365,146,92,	0,2137,3950,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	156033246	156034080	chr2:156033246-156034080	7	-	156033246	156033246	16724991	1	834,	0,
#Partially deleted in new
chr2	156305107	156320255	chr2:156305107-156320255	3	-	156305107	156305107	8553170	3	320,318,41,	0,12319,15107,
#Deleted in new
chr2	156324431	156332716	chr2:156324431-156332716	1	-	156325743	156330186	0	8	1569,179,203,164,130,866,124,237,	0,1718,2286,3419,3972,4891,6236,8048,
#Deleted in new
chr2	156325081	156332714	chr2:156325081-156332714	1	-	156325743	156329997	0	8	919,179,203,164,130,688,124,235,	0,1068,1636,2769,3322,4241,5586,7398,
#Deleted in new
chr2	156325097	156342348	chr2:156325097-156342348	3	-	156325743	156330186	0	8	903,179,203,164,130,866,124,309,	0,1052,1620,2753,3306,4225,5570,16942,
#Deleted in new
chr2	156325099	156330788	chr2:156325099-156330788	0	-	156326200	156329997	789624	7	901,58,203,164,130,688,121,	0,1050,1618,2751,3304,4223,5568,
#Deleted in new
chr2	156325099	156331965	chr2:156325099-156331965	0	-	156326200	156329997	789624	8	901,58,203,164,130,688,124,182,	0,1050,1618,2751,3304,4223,5568,6684,
#Deleted in new
chr2	156325743	156330707	chr2:156325743-156330707	1	-	156325774	156330186	789624	8	257,58,17,203,164,130,866,40,	0,406,568,974,2107,2660,3579,4924,
#Deleted in new
chr2	156325743	156330721	chr2:156325743-156330721	1	-	156325774	156329997	789624	8	257,58,17,203,164,130,688,54,	0,406,568,974,2107,2660,3579,4924,
#Deleted in new
chr2	156327903	156330121	chr2:156327903-156330121	0	-	156327903	156330121	789624	3	111,130,208,	0,500,2010,
#Deleted in new
chr2	156329412	156332713	chr2:156329412-156332713	0	-	156329412	156330186	789624	2	776,234,	0,3067,
#Deleted in new
chr2	156329677	156332720	chr2:156329677-156332720	0	-	156329677	156329997	789624	2	333,241,	0,2802,
#Partially deleted in new
chr2	156435289	156510849	chr2:156435289-156510849	0	+	156476105	156510849	789624	4	120,110,172,54,	0,40808,60754,75506,
#Partially deleted in new
chr2	156435440	156586403	chr2:156435440-156586403	3	+	156476105	156582918	789624	17	364,110,172,125,98,164,165,145,194,135,176,132,159,113,79,99,3611,	0,40657,60603,75355,76779,77892,114167,115161,121948,133384,133922,134646,135693,143448,143645,144249,147352,
#Partially deleted in new
chr2	156436388	156583058	chr2:156436388-156583058	1	+	156476105	156582918	789624	17	125,110,172,125,98,164,165,145,194,135,176,132,159,113,79,99,266,	0,39709,59655,74407,75831,76944,113219,114213,121000,132436,132974,133698,134745,142500,142697,143301,146404,
#Partially deleted in new
chr2	156436426	156501881	chr2:156436426-156501881	0	+	156436426	156436426	8553170	4	189,110,172,97,	0,39671,59617,65358,
#Partially deleted in new
chr2	156436484	156583404	chr2:156436484-156583404	1	+	156476105	156579091	789624	12	29,110,172,125,98,164,165,145,163,79,99,612,	0,39613,59559,74311,75735,76848,113123,114117,120904,142601,143205,146308,
#Partially deleted in new
chr2	156473571	156583228	chr2:156473571-156583228	1	+	156510899	156582918	789624	18	65,110,172,95,124,98,164,165,145,194,135,176,132,159,113,79,99,436,	0,2526,22472,28213,37225,38648,39761,76036,77030,83817,95253,95791,96515,97562,105317,105514,106118,109221,
#Partially deleted in new
chr2	156473571	156583058	chr2:156473571-156583058	1	+	156476105	156582918	789624	17	65,110,172,125,98,164,165,145,194,135,176,132,159,113,79,99,266,	0,2526,22472,37224,38648,39761,76036,77030,83817,95253,95791,96515,97562,105317,105514,106118,109221,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr2	156473571	156613735	chr2:156473571-156613735	0	+	156476105	156610727	789624	19	65,110,172,125,98,164,165,145,194,135,176,132,159,113,79,99,122,126,261,	0,2526,22472,37224,38648,39761,76036,77030,83817,95253,95791,96515,97562,105317,105514,106118,109221,137152,139903,
#Partially deleted in new
chr2	156473571	156501844	chr2:156473571-156501844	0	+	156476105	156495630	789624	5	65,110,130,172,60,	0,2526,21990,22472,28213,
#Partially deleted in new
chr2	156473591	156510834	chr2:156473591-156510834	0	+	156476105	156495630	789624	5	45,110,130,172,39,	0,2506,21970,22452,37204,
#Partially deleted in new
chr2	156571171	156583009	chr2:156571171-156583009	0	+	156571171	156571171	8553170	4	121,276,99,217,	0,7717,8518,11621,
#Partially deleted in new
chr2	156579082	156583048	chr2:156579082-156583048	0	+	156579082	156579082	8553170	3	82,99,256,	0,607,3710,
#Deleted in new
chr2	156579685	156583273	chr2:156579685-156583273	0	+	156579685	156579685	8553170	2	103,481,	0,3107,
#Deleted in new
chr2	156777705	156778372	chr2:156777705-156778372	7	-	156777705	156777705	16724991	1	667,	0,
#Deleted in new
chr2	157210846	157211539	chr2:157210846-157211539	7	-	157210846	157210846	16724991	1	693,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	157257597	157314211	chr2:157257597-157314211	3	+	157258082	157311348	789624	10	1939,167,120,136,120,118,324,81,162,3004,	0,26684,28417,38065,38796,41950,43078,48151,50969,53610,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	157298806	157299158	chr2:157298806-157299158	3	-	157298806	157298806	8553170	1	352,	0,
#Deleted in new
chr2	157300802	157302597	chr2:157300802-157302597	0	+	157300802	157300802	8553170	2	197,470,	0,1325,
#Deleted in new
chr2	157301485	157302597	chr2:157301485-157302597	0	+	157301485	157301485	8553170	2	177,470,	0,642,
#Partially deleted in new
chr2	157318624	157325934	chr2:157318624-157325934	3	-	157321270	157325642	789624	3	3167,93,533,	0,6045,6777,
#Partially deleted in new
chr2	157318638	157327713	chr2:157318638-157327713	1	-	157321270	157327479	789624	4	3153,93,273,241,	0,6031,6763,8834,
#Partially deleted in new
chr2	157320996	157325873	chr2:157320996-157325873	0	-	157325222	157325642	789624	4	795,93,106,472,	0,3673,4134,4405,
#Partially deleted in new
chr2	157321001	157325824	chr2:157321001-157325824	1	-	157321270	157325642	789624	3	790,33,423,	0,3668,4400,
#Partially deleted in new
chr2	157321644	157327248	chr2:157321644-157327248	0	-	157321644	157325642	789624	4	147,93,261,40,	0,3025,3757,5564,
#Partially deleted in new
chr2	157321668	157327309	chr2:157321668-157327309	0	-	157321668	157325642	789624	4	123,93,273,101,	0,3001,3733,5540,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	157321738	157325659	chr2:157321738-157325659	1	-	157324162	157325642	789624	4	53,152,93,258,	0,2379,2931,3663,
#Partially deleted in new
chr2	157321781	157325901	chr2:157321781-157325901	0	-	157321781	157325642	789624	3	10,84,500,	0,2888,3620,
#Deleted in new
chr2	157379723	157380414	chr2:157379723-157380414	7	-	157379723	157379723	16724991	1	691,	0,
#Partially deleted in new
chr2	157414618	157444142	chr2:157414618-157444142	3	-	157415676	157444020	0	8	1525,67,70,94,103,55,50,296,	0,3904,12732,15940,16241,19751,20079,29228,
#Partially deleted in new
chr2	157416045	157439414	chr2:157416045-157439414	0	-	157416045	157430923	789624	9	98,67,70,94,103,55,50,81,139,	0,2477,11305,14513,14814,18324,18652,22837,23230,
#Partially deleted in new
chr2	157416070	157444098	chr2:157416070-157444098	0	-	157438951	157444020	789624	9	73,67,70,94,103,55,50,81,252,	0,2452,11280,14488,14789,18299,18627,22812,27776,
#Partially deleted in new
chr2	157430870	157488961	chr2:157430870-157488961	0	-	157430870	157430870	8553170	7	92,55,50,92,103,102,42,	0,3499,3827,34065,56461,57063,58049,
#Partially deleted in new
chr2	157430912	157488960	chr2:157430912-157488960	0	-	157430912	157443915	789624	7	50,55,50,160,103,102,41,	0,3457,3785,12934,56419,57021,58007,
#Partially deleted in new
chr2	157434160	157444092	chr2:157434160-157444092	0	-	157434160	157434160	8553170	3	264,50,246,	0,537,9686,
#Partially deleted in new
chr2	157434415	157444086	chr2:157434415-157444086	0	-	157434415	157434415	8553170	2	332,240,	0,9431,
#Partially deleted in new
chr2	157434708	157488829	chr2:157434708-157488829	0	-	157434708	157443915	789624	6	39,160,92,103,102,127,	0,9138,30227,52623,53225,53994,
#Partially deleted in new
chr2	157526766	157629005	chr2:157526766-157629005	3	-	157533917	157628644	789624	9	7277,131,125,157,168,231,240,231,434,	0,11806,14323,15939,17678,23395,29326,60420,101805,
#Partially deleted in new
chr2	157533741	157628727	chr2:157533741-157628727	1	-	157533917	157628644	789624	8	302,131,125,157,168,231,231,156,	0,4831,7348,8964,10703,16420,53445,94830,
#Partially deleted in new
chr2	157533741	157628727	chr2:157533741-157628727	1	-	157533917	157628644	789624	7	302,131,125,157,168,231,156,	0,4831,7348,8964,10703,53445,94830,
#Partially deleted in new
chr2	157533741	157597560	chr2:157533741-157597560	1	-	157533917	157587340	789624	9	302,131,125,157,168,231,240,231,201,	0,4831,7348,8964,10703,16420,22351,53445,63618,
#Partially deleted in new
chr2	157725707	157736005	chr2:157725707-157736005	3	-	157725707	157725707	8553170	2	483,62,	0,10236,
#Partially deleted in new
chr2	157736443	157875111	chr2:157736443-157875111	1	-	157737530	157799493	0	11	1222,131,198,276,147,100,212,264,74,175,248,	0,1996,24436,29477,33924,37644,41687,43893,62983,81941,138420,
#Partially deleted in new
chr2	157736448	157806996	chr2:157736448-157806996	1	-	157737530	157799493	0	10	1217,131,198,276,147,100,212,264,74,260,	0,1991,24431,29472,33919,37639,41682,43888,62978,70288,
#Partially deleted in new
chr2	157736448	157875862	chr2:157736448-157875862	3	-	157737530	157799493	0	11	1217,131,198,276,147,100,212,264,74,175,67,	0,1991,24431,29472,33919,37639,41682,43888,62978,81936,139347,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	157737315	157838278	chr2:157737315-157838278	1	-	157737530	157799493	0	12	350,131,198,276,147,100,212,264,74,175,119,38,	0,1124,23564,28605,33052,36772,40815,43021,62111,81069,89212,100925,
#Partially deleted in new
chr2	157778149	157790237	chr2:157778149-157790237	0	-	157778149	157778149	8553170	3	193,264,106,	0,2187,11982,
#Partially deleted in new
chr2	157780405	157838327	chr2:157780405-157838327	0	-	157780405	157799493	789624	4	195,74,175,87,	0,19021,37979,57835,
#Partially deleted in new
chr2	157780407	157875626	chr2:157780407-157875626	0	-	157780407	157799493	789624	4	193,74,175,92,	0,19019,37977,95127,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	157780449	157875840	chr2:157780449-157875840	0	-	157780449	157799493	789624	5	151,74,175,119,45,	0,18977,37935,46078,95346,
#Duplicated in new
chr2	157799428	157875840	chr2:157799428-157875840	0	-	157799428	157799493	789624	5	72,175,119,125,45,	0,18956,27099,60626,76367,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	157876701	158136154	chr2:157876701-158136154	1	+	157995198	158134890	0	10	27,80,86,86,118,159,115,210,147,1407,	0,118478,139099,225338,229397,238399,241122,244707,247047,258046,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	157877682	157878565	chr2:157877682-157878565	3	+	157877682	157877682	8553170	1	883,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	157912771	157912885	chr2:157912771-157912885	3	+	157912771	157912771	8553170	1	114,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	157917711	157918371	chr2:157917711-157918371	3	+	157917711	157917711	8553170	1	660,	0,
#Deleted in new
chr2	157961409	157962888	chr2:157961409-157962888	7	-	157961409	157961409	16724991	1	1479,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	157985788	157985894	chr2:157985788-157985894	3	-	157985788	157985788	8553170	1	106,	0,
#Deleted in new
chr2	158065544	158066059	chr2:158065544-158066059	7	+	158065544	158065544	16724991	1	515,	0,
#Partially deleted in new
chr2	158101867	158135227	chr2:158101867-158135227	0	+	158101867	158101867	8553170	4	258,118,147,480,	0,4231,21881,32880,
#Partially deleted in new
chr2	158101869	158135966	chr2:158101869-158135966	3	+	158102063	158134890	0	7	256,118,159,115,210,147,1219,	0,4229,13231,15954,19539,21879,32878,
#Partially deleted in new
chr2	158126425	158135298	chr2:158126425-158135298	0	+	158126425	158126425	8553170	2	350,551,	0,8322,
#Partially deleted in new
chr2	158127956	158133988	chr2:158127956-158133988	3	+	158127956	158127956	8553170	2	79,278,	0,5754,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	158166649	158236169	chr2:158166649-158236169	3	+	158166649	158166649	789624	5	74,95,52,134,440,	0,9951,11411,40834,69080,
#Partially deleted in new
chr2	158171080	158456753	chr2:158171080-158456753	3	-	158172112	158456439	789624	14	1179,141,118,119,141,207,139,182,96,152,83,104,122,339,	0,5440,7798,49514,79691,138352,142675,167645,167909,169161,169517,174134,187368,285334,
#Partially deleted in new
chr2	158171356	158456599	chr2:158171356-158456599	0	-	158313876	158456439	789624	9	903,141,118,119,141,207,139,122,185,	0,5164,7522,49238,79415,138076,142399,187092,285058,
#Partially deleted in new
chr2	158171543	158380960	chr2:158171543-158380960	1	-	158172112	158366065	789624	15	716,141,118,119,141,207,139,182,96,152,83,104,122,63,140,	0,4977,7335,49051,79228,137889,142212,167182,167446,168698,169054,173671,186905,194470,209277,
#Partially deleted in new
chr2	158171973	158456566	chr2:158171973-158456566	0	-	158340674	158456439	789624	12	286,141,118,119,141,207,139,182,96,83,122,152,	0,4547,6905,48621,78798,137459,141782,166752,167016,168624,186475,284441,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	158288587	158456753	chr2:158288587-158456753	0	-	158340657	158456439	789624	8	249,207,139,182,96,152,83,339,	0,20845,25168,50138,50402,51654,52010,167827,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	158288622	158456708	chr2:158288622-158456708	0	-	158345220	158456439	789624	9	214,207,139,182,96,152,83,104,294,	0,20810,25133,50103,50367,51619,51975,56592,167792,
#Partially deleted in new
chr2	158338592	158456702	chr2:158338592-158456702	1	-	158338721	158456439	789624	7	315,96,152,83,104,122,288,	0,397,1649,2005,6622,19856,117822,
#Partially deleted in new
chr2	158366013	158456726	chr2:158366013-158456726	0	-	158366013	158366013	8553170	3	63,83,312,	0,27214,90401,
#Partially deleted in new
chr2	158419954	158425303	chr2:158419954-158425303	7	+	158419954	158419954	16724991	2	175,576,	0,4773,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	158447165	158447461	chr2:158447165-158447461	3	-	158447165	158447165	8553170	1	296,	0,
#Partially deleted in new
chr2	158456963	158681052	chr2:158456963-158681052	0	+	158533184	158625002	789624	22	255,137,113,35,132,191,473,189,217,133,214,184,118,192,174,151,196,85,118,129,74,624,	0,76216,120307,146106,164026,164267,167991,174789,177109,183663,185522,201167,204369,205933,206308,209449,212756,216713,216919,219775,221617,223465,
#Partially deleted in new
chr2	158457096	158680836	chr2:158457096-158680836	1	+	158533184	158680734	789624	25	122,137,113,35,132,191,550,189,217,133,214,184,118,192,174,18,18,112,196,85,118,129,74,246,159,	0,76083,120174,145973,163893,164134,167781,174656,176976,183530,185389,201034,204236,205800,206175,209316,209336,209355,212623,216580,216786,219642,221484,223332,223581,
#Partially deleted in new
chr2	158457098	158682879	chr2:158457098-158682879	1	+	158533184	158680677	789624	21	120,137,113,35,132,191,550,189,220,133,214,184,118,192,174,151,196,85,118,74,2451,	0,76081,120172,145971,163891,164132,167779,174654,176971,183528,185387,201032,204234,205798,206173,209314,212621,216578,216784,221482,223330,
#Partially deleted in new
chr2	158457111	158681429	chr2:158457111-158681429	3	+	158533184	158680677	789624	22	107,137,113,35,132,191,550,189,220,133,214,184,118,192,174,151,196,85,118,129,74,1001,	0,76068,120159,145958,163878,164119,167766,174641,176958,183515,185374,201019,204221,205785,206160,209301,212608,216565,216771,219627,221469,223317,
#Partially deleted in new
chr2	158457113	158621022	chr2:158457113-158621022	0	+	158533184	158533467	789624	6	105,137,97,113,35,33,	0,76066,76324,120157,145956,163876,
#Partially deleted in new
chr2	158457132	158663066	chr2:158457132-158663066	0	+	158533184	158603078	789624	13	86,137,35,132,191,550,189,220,133,214,184,118,170,	0,76047,145937,163857,164098,167745,174620,176937,183494,185353,200998,204200,205764,
#Deleted in new
chr2	158457132	158458331	chr2:158457132-158458331	0	+	158457132	158457132	8553170	2	86,464,	0,735,
#Partially deleted in new
chr2	158457135	158588950	chr2:158457135-158588950	0	+	158533184	158578211	789624	6	83,137,113,95,61,63,	0,76044,120135,121033,131089,131752,
#Partially deleted in new
chr2	158457454	158663003	chr2:158457454-158663003	0	+	158533184	158625002	789624	14	853,137,113,35,132,191,473,189,220,133,214,184,118,107,	0,75725,119816,145615,163535,163776,167500,174298,176615,183172,185031,200676,203878,205442,
#Partially deleted in new
chr2	158458192	158621396	chr2:158458192-158621396	0	+	158458192	158458192	8553170	5	115,113,35,132,166,	0,119078,144877,162797,163038,
#Deleted in new
chr2	158533184	158533467	chr2:158533184-158533467	1	+	158533184	158533467	789624	2	132,30,	0,253,
#Deleted in new
chr2	158548424	158549224	chr2:158548424-158549224	7	+	158548424	158548424	16724991	1	800,	0,
#Partially deleted in new
chr2	158577340	158631932	chr2:158577340-158631932	0	+	158577340	158625223	789624	6	43,35,132,191,303,180,	0,25729,43649,43890,47784,54412,
#Partially deleted in new
chr2	158632473	158640759	chr2:158632473-158640759	0	+	158632473	158632473	8553170	3	169,220,133,	0,1596,8153,
#Partially deleted in new
chr2	158642519	158661764	chr2:158642519-158661764	0	+	158642519	158642519	8553170	3	180,184,432,	0,15611,18813,
#Partially deleted in new
chr2	158658336	158735002	chr2:158658336-158735002	3	-	158658336	158658336	789624	4	3414,234,144,275,	0,7511,20909,76391,
#Partially deleted in new
chr2	158662241	158681426	chr2:158662241-158681426	0	+	158662241	158662241	8553170	9	847,174,151,196,85,118,129,74,998,	0,1030,4171,7478,11435,11641,14497,16339,18187,
#Partially deleted in new
chr2	158662989	158669306	chr2:158662989-158669306	0	+	158662989	158662989	8553170	4	99,174,151,156,	0,282,3423,6161,
#Deleted in new
chr2	158663057	158666659	chr2:158663057-158666659	0	+	158663057	158663057	8553170	3	31,174,247,	0,214,3355,
#Partially deleted in new
chr2	158669169	158677355	chr2:158669169-158677355	0	+	158669169	158669169	8553170	4	746,85,118,617,	0,4507,4713,7569,
#Partially deleted in new
chr2	158678655	158734818	chr2:158678655-158734818	0	-	158678655	158678655	8553170	2	734,91,	0,56072,
#Partially deleted in new
chr2	158678655	158723980	chr2:158678655-158723980	1	-	158678655	158678655	8553170	2	734,1217,	0,44108,
#Partially deleted in new
chr2	158685902	158753775	chr2:158685902-158753775	3	+	158685902	158685902	8553170	3	114,255,141,	0,4799,67732,
#Partially deleted in new
chr2	158703286	158703460	chr2:158703286-158703460	7	+	158703286	158703286	16724991	1	174,	0,
#Partially deleted in new
chr2	158795316	158815993	chr2:158795316-158815993	3	+	158795372	158815821	789624	4	114,88,61,289,	0,8965,11738,20388,
#Partially deleted in new
chr2	158795316	158853782	chr2:158795316-158853782	1	+	158795372	158853636	789624	5	114,88,61,92,189,	0,8965,11738,31079,58277,
#Partially deleted in new
chr2	158804297	158862781	chr2:158804297-158862781	0	+	158804297	158862706	789624	4	72,61,92,373,	0,2757,22098,58111,
#Deleted in new
chr2	158853754	158854576	chr2:158853754-158854576	7	+	158853754	158853754	16724991	1	822,	0,
#Deleted in new
chr2	158862310	158863285	chr2:158862310-158863285	7	+	158862310	158862310	16724991	1	975,	0,
#Deleted in new
chr2	158874641	158875670	chr2:158874641-158875670	7	+	158874641	158874641	16724991	1	1029,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	158935797	158935985	chr2:158935797-158935985	3	-	158935797	158935797	8553170	1	188,	0,
#Partially deleted in new
chr2	158968670	159232659	chr2:158968670-159232659	3	+	159065910	159231012	789624	27	112,110,76,198,105,131,187,264,123,282,152,232,167,608,109,123,237,186,79,134,124,176,133,92,147,101,3082,	0,32409,97225,128966,167523,180471,181699,194612,200579,201853,203450,206282,207681,209885,217120,218231,225586,227937,230304,248826,250567,251021,255561,257017,259148,260125,260907,
#Deleted in new
chr2	159003974	159004320	chr2:159003974-159004320	7	+	159003974	159003974	16724991	1	346,	0,
#Partially deleted in new
chr2	159027035	159027142	chr2:159027035-159027142	3	-	159027035	159027035	8553170	1	107,	0,
#Partially deleted in new
chr2	159056004	159056859	chr2:159056004-159056859	7	-	159056004	159056004	16724991	2	286,244,	0,611,
#Partially deleted in new
chr2	159136198	159150777	chr2:159136198-159150777	0	+	159136198	159136198	8553170	2	100,1636,	0,12943,
#Deleted in new
chr2	159147539	159150777	chr2:159147539-159150777	0	+	159147539	159147539	8553170	2	1733,408,	0,2830,
#Deleted in new
chr2	159186834	159186901	chr2:159186834-159186901	3	+	159186834	159186834	789624	1	67,	0,
#Partially deleted in new
chr2	159199017	159232655	chr2:159199017-159232655	0	+	159199017	159199017	8553170	8	36,134,630,133,92,147,101,3078,	0,18479,20220,25214,26670,28801,29778,30560,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	159224392	159232659	chr2:159224392-159232659	0	+	159224392	159224392	8553170	2	4504,3082,	0,5185,
#Partially deleted in new
chr2	159235792	159286799	chr2:159235792-159286799	3	-	159236032	159283069	789624	11	398,141,180,107,41,34,94,93,185,422,217,	0,12579,20403,21965,22152,24017,35909,39753,43968,46879,50790,
#Partially deleted in new
chr2	159235797	159286703	chr2:159235797-159286703	1	-	159236032	159283069	789624	7	393,141,180,93,185,422,121,	0,12574,20398,39748,43963,46874,50785,
#Partially deleted in new
chr2	159235800	159286552	chr2:159235800-159286552	1	-	159236032	159283069	789624	11	390,141,180,107,41,34,94,93,185,422,125,	0,12571,20395,21957,22144,24009,35901,39745,43960,46871,50627,
#Partially deleted in new
chr2	159235800	159286592	chr2:159235800-159286592	1	-	159236032	159283069	789624	11	390,141,180,107,41,34,94,93,185,422,233,	0,12571,20395,21957,22144,24009,35901,39745,43960,46871,50559,
#Partially deleted in new
chr2	159235833	159286669	chr2:159235833-159286669	1	-	159236032	159283069	789624	10	357,180,107,41,34,94,93,185,422,87,	0,20362,21924,22111,23976,35868,39712,43927,46838,50749,
#Partially deleted in new
chr2	159318978	159616569	chr2:159318978-159616569	1	-	159320264	159478719	0	36	1440,144,266,147,136,206,161,156,274,650,145,63,244,75,215,255,141,66,45,66,66,62,93,211,109,61,294,607,393,204,194,162,189,147,43,328,	0,5832,6674,13561,17963,18588,28507,29699,30028,30729,54066,55712,63580,64627,66176,67374,70366,76790,78366,79850,81620,85870,86043,93356,109332,110221,111884,113778,119324,120030,127803,129263,134634,159596,236844,297263,
#Partially deleted in new
chr2	159318978	159616692	chr2:159318978-159616692	3	-	159320264	159478719	0	37	1440,144,266,147,136,206,161,156,274,650,145,63,244,75,215,255,141,66,45,66,66,62,93,211,102,109,61,294,607,393,204,194,168,189,147,43,451,	0,5832,6674,13561,17963,18588,28507,29699,30028,30729,54066,55712,63580,64627,66176,67374,70366,76790,78366,79850,81620,85870,86043,93356,108962,109332,110221,111884,113778,119324,120030,127803,129263,134634,159596,236844,297263,
#Partially deleted in new
chr2	159321857	159332996	chr2:159321857-159332996	0	-	159321857	159321857	8553170	4	170,144,266,457,	0,2953,3795,10682,
#Partially deleted in new
chr2	159325763	159347615	chr2:159325763-159347615	0	-	159325763	159325763	8553170	4	155,147,206,130,	0,6776,11803,21722,
#Partially deleted in new
chr2	159336959	159347593	chr2:159336959-159347593	0	-	159336959	159347593	789624	3	118,311,108,	0,502,10526,
#Partially deleted in new
chr2	159385164	159398206	chr2:159385164-159398206	0	-	159385164	159385164	8553170	6	205,255,141,66,38,37,	0,1188,4180,10604,12180,13005,
#Partially deleted in new
chr2	159385291	159392207	chr2:159385291-159392207	0	-	159385291	159385291	8553170	4	78,255,141,89,	0,1061,4053,6827,
#Partially deleted in new
chr2	159386366	159404632	chr2:159386366-159404632	0	+	159386366	159386366	8553170	4	106,114,95,240,	0,5734,12527,18026,
#Partially deleted in new
chr2	159386373	159400650	chr2:159386373-159400650	0	-	159386373	159400650	789624	7	234,141,66,27,45,66,52,	0,2971,9395,10700,10971,12455,14225,
#Partially deleted in new
chr2	159395397	159398917	chr2:159395397-159398917	0	+	159395397	159395397	8553170	4	342,158,60,24,	0,615,1079,3496,
#Partially deleted in new
chr2	159395420	159404636	chr2:159395420-159404636	3	+	159395420	159395420	8553170	4	750,60,95,244,	0,1056,3473,8972,
#Partially deleted in new
chr2	159396036	159398912	chr2:159396036-159398912	0	+	159396036	159396036	8553170	2	134,19,	0,2857,
#Deleted in new
chr2	159398206	159398947	chr2:159398206-159398947	0	+	159398206	159398206	8553170	2	120,54,	0,687,
#Partially deleted in new
chr2	159398842	159453661	chr2:159398842-159453661	1	-	159404865	159446889	789624	15	52,66,53,8,93,211,102,109,61,607,393,204,194,162,49,	0,1756,6006,6060,6179,13492,29098,29468,30357,33914,39460,40166,47939,49399,54770,
#Partially deleted in new
chr2	159400598	159419867	chr2:159400598-159419867	0	-	159400598	159400598	8553170	5	66,62,93,211,88,	0,4250,4423,11736,19181,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	159404371	159435553	chr2:159404371-159435553	0	-	159404371	159404371	8553170	8	539,93,211,102,109,61,294,2797,	0,650,7963,23569,23939,24828,26491,28385,
#Partially deleted in new
chr2	159412431	159432950	chr2:159412431-159432950	0	-	159412431	159432950	789624	5	114,102,109,61,194,	0,15509,15879,16768,20325,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	159437394	159555864	chr2:159437394-159555864	0	-	159437394	159437394	8553170	5	1818,194,168,147,42,	0,9387,10847,41180,118428,
#Partially deleted in new
chr2	159438302	159516659	chr2:159438302-159516659	0	-	159438302	159438302	8553170	7	393,204,194,162,189,147,381,	0,706,8479,9939,15310,40272,77976,
#Deleted in new
chr2	159444116	159444913	chr2:159444116-159444913	7	+	159444116	159444116	16724991	1	797,	0,
#Partially deleted in new
chr2	159446835	159616505	chr2:159446835-159616505	0	-	159446835	159478719	789624	4	140,147,43,264,	0,31739,108987,169406,
#Partially deleted in new
chr2	159448315	159615560	chr2:159448315-159615560	0	-	159448315	159478719	789624	5	94,189,147,43,167,	0,5297,30259,107507,167078,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	159458323	159616450	chr2:159458323-159616450	0	-	159458323	159458323	8553170	4	6439,147,43,209,	0,20251,97499,157918,
#Deleted in new
chr2	159462416	159463256	chr2:159462416-159463256	7	-	159462416	159462416	16724991	1	840,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	159536243	159536346	chr2:159536243-159536346	3	-	159536243	159536243	8553170	1	103,	0,
#Partially deleted in new
chr2	159555442	159615424	chr2:159555442-159615424	0	-	159555442	159555442	8553170	2	423,31,	0,59951,
#Deleted in new
chr2	159615295	159617082	chr2:159615295-159617082	3	+	159615295	159615295	789624	2	158,1336,	0,451,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	159670707	159712430	chr2:159670707-159712430	0	-	159670707	159670707	8553170	3	106,178,117,	0,40009,41606,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	159670711	159712018	chr2:159670711-159712018	0	-	159670711	159670711	8553170	3	99,178,98,	0,40005,41209,
#Partially deleted in new
chr2	159689216	159690291	chr2:159689216-159690291	7	-	159689216	159689216	16724991	2	144,621,	0,454,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	159693200	159712435	chr2:159693200-159712435	3	-	159693200	159693200	789624	3	2220,178,122,	0,17516,19113,
#Partially deleted in new
chr2	159712456	159768583	chr2:159712456-159768583	1	+	159729022	159767352	789624	8	150,167,193,1099,170,110,114,1300,	0,16552,30604,35348,39945,46769,50423,54827,
#Partially deleted in new
chr2	159712488	159767369	chr2:159712488-159767369	1	+	159729022	159767342	789624	12	118,42,86,167,193,168,1099,170,110,114,49,86,	0,2068,3192,16520,30572,33281,35316,39913,46737,50391,52137,54795,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	159712498	159771027	chr2:159712498-159771027	3	+	159729022	159767342	789624	10	108,167,193,168,1099,170,110,114,49,3744,	0,16510,30562,33271,35306,39903,46727,50381,52127,54785,
#Partially deleted in new
chr2	159712506	159743211	chr2:159712506-159743211	0	+	159729022	159743211	789624	4	155,86,167,151,	0,3174,16502,30554,
#Partially deleted in new
chr2	159712522	159748126	chr2:159712522-159748126	0	+	159712522	159712522	8553170	4	139,167,193,322,	0,16486,30538,35282,
#Partially deleted in new
chr2	159733964	159767409	chr2:159733964-159767409	1	+	159734043	159767342	789624	9	118,193,168,1099,170,110,114,49,126,	0,9096,11805,13840,18437,25261,28915,30661,33319,
#Partially deleted in new
chr2	159745769	159752525	chr2:159745769-159752525	0	+	159745769	159745769	8553170	2	168,124,	0,6632,
#Partially deleted in new
chr2	159752489	159767960	chr2:159752489-159767960	0	+	159752489	159767352	789624	4	82,110,114,677,	0,6736,10390,14794,
#Partially deleted in new
chr2	159759291	159767850	chr2:159759291-159767850	0	+	159759291	159759291	8553170	4	67,114,49,567,	0,3588,5334,7992,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	159768629	159798255	chr2:159768629-159798255	1	-	159771850	159798198	0	5	3424,27,117,111,124,	0,9308,12252,14729,29502,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	159768629	159798255	chr2:159768629-159798255	1	-	159771850	159798198	789624	5	3424,27,174,117,124,	0,9308,11375,12252,29502,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	159768852	159798242	chr2:159768852-159798242	3	-	159771850	159798198	0	6	3201,27,174,117,111,111,	0,9085,11152,12029,14506,29279,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	159768852	159798242	chr2:159768852-159798242	0	-	159768852	159768852	8553170	7	3201,27,174,117,98,111,111,	0,9085,11152,12029,12582,14506,29279,
#Partially deleted in new
chr2	159771850	159904710	chr2:159771850-159904710	3	-	159771850	159904682	789624	39	203,27,174,117,111,168,123,150,169,227,195,117,168,166,227,130,161,106,140,80,68,176,36,115,69,82,143,200,170,89,111,158,192,141,111,165,171,372,122,	0,6087,8154,9031,11508,35122,36598,38675,43554,44955,47875,59819,62193,63629,68878,70394,78129,78511,80350,81422,81779,82509,83053,86511,88970,92988,100600,103593,106473,106782,107408,109232,110273,113302,114569,118362,122063,126837,132738,
#Partially deleted in new
chr2	159771850	159904710	chr2:159771850-159904710	1	-	159771850	159904682	789624	38	203,27,174,117,111,123,150,169,227,195,117,168,166,227,130,161,106,140,80,68,176,36,115,69,82,143,200,170,89,111,158,192,141,111,165,171,372,122,	0,6087,8154,9031,11508,36598,38675,43554,44955,47875,59819,62193,63629,68878,70394,78129,78511,80350,81422,81779,82509,83053,86511,88970,92988,100600,103593,106473,106782,107408,109232,110273,113302,114569,118362,122063,126837,132738,
#Boundary problem: need 35, got 0, diff 35, mapped 0.0
chr2	159803354	159904710	chr2:159803354-159904710	3	-	159805043	159904682	789624	35	1868,168,123,150,169,227,195,117,168,166,227,130,161,106,140,80,68,176,36,115,69,82,143,200,170,89,111,158,192,141,111,165,171,372,122,	0,3618,5094,7171,12050,13451,16371,28315,30689,32125,37374,38890,46625,47007,48846,49918,50275,51005,51549,55007,57466,61484,69096,72089,74969,75278,75904,77728,78769,81798,83065,86858,90559,95333,101234,
#Partially deleted in new
chr2	159812233	159814009	chr2:159812233-159814009	7	-	159812233	159812233	16724991	2	124,127,	0,1649,
#Partially deleted in new
chr2	159871818	159904742	chr2:159871818-159904742	0	-	159871818	159871818	8553170	13	775,200,170,89,111,158,192,141,111,165,171,372,154,	0,3625,6505,6814,7440,9264,10305,13334,14601,18394,22095,26869,32770,
#Deleted in new
chr2	159902364	159904749	chr2:159902364-159904749	0	-	159902364	159902364	8553170	2	1241,161,	0,2224,
#Deleted in new
chr2	159902548	159904649	chr2:159902548-159904649	0	-	159902548	159902548	8553170	2	532,61,	0,2040,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr2	159932005	160062610	chr2:159932005-160062610	3	-	159941777	160062403	789624	30	9987,33,177,117,141,169,239,148,131,118,140,104,65,158,36,133,85,146,203,170,113,99,158,195,144,114,174,174,384,316,	0,10121,12900,14795,15413,17602,19334,23193,23692,24504,35533,37250,38142,44062,44679,45278,47824,51922,55150,73646,81257,84608,88100,90659,96212,96844,100953,110019,112768,130289,
#Partially deleted in new
chr2	159932005	159945000	chr2:159932005-159945000	0	-	159932005	159932005	8553170	4	293,247,33,95,	0,9740,10121,12900,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr2	159945814	160062610	chr2:159945814-160062610	1	-	159946792	160062403	789624	27	1103,141,169,239,148,131,118,140,104,65,158,36,133,85,146,203,170,113,99,158,195,144,114,174,174,384,316,	0,1604,3793,5525,9384,9883,10695,21724,23441,24333,30253,30870,31469,34015,38113,41341,59837,67448,70799,74291,76850,82403,83035,87144,96210,98959,116480,
#Partially deleted in new
chr2	160099665	160200301	chr2:160099665-160200301	3	-	160101735	160200063	0	15	2169,167,120,98,223,418,135,90,96,162,166,247,205,80,299,	0,8013,12414,24125,26713,37768,38399,42316,69546,72903,74308,95703,96550,99513,100337,
#Partially deleted in new
chr2	160099666	160200313	chr2:160099666-160200313	1	-	160101735	160200063	789624	13	2168,167,120,98,223,418,135,90,96,162,166,247,311,	0,8012,12413,24124,26712,37767,38398,42315,69545,72902,74307,95702,100336,
#Partially deleted in new
chr2	160099670	160200304	chr2:160099670-160200304	0	-	160195575	160200063	789624	15	2164,167,120,98,223,418,135,90,96,162,166,247,32,80,302,	0,8008,12409,24120,26708,37763,38394,42311,69541,72898,74303,95698,96718,99508,100332,
#Partially deleted in new
chr2	160101564	160112110	chr2:160101564-160112110	0	-	160101564	160101564	8553170	4	81,75,167,31,	0,195,6114,10515,
#Partially deleted in new
chr2	160101635	160200252	chr2:160101635-160200252	1	-	160101735	160200017	789624	14	199,167,120,98,223,418,135,90,96,162,166,247,205,250,	0,6043,10444,22155,24743,35798,36429,40346,67576,70933,72338,93733,94580,98367,
#Partially deleted in new
chr2	160101684	160200258	chr2:160101684-160200258	1	-	160101735	160200063	0	13	150,167,120,418,135,90,96,162,166,247,205,80,256,	0,5994,10395,35749,36380,40297,67527,70884,72289,93684,94531,97494,98318,
#Partially deleted in new
chr2	160101735	160200304	chr2:160101735-160200304	1	-	160101735	160200063	0	16	99,167,120,98,223,418,135,90,96,162,166,247,205,80,76,119,	0,5943,10344,22055,24643,35698,36329,40246,67476,70833,72238,93633,94480,97443,98267,98450,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	160141980	160271888	chr2:160141980-160271888	3	-	160141980	160141980	8553170	10	91,96,162,166,131,247,205,82,211,169,	0,27231,30588,31993,36915,53388,54235,59155,63882,129739,
#Partially deleted in new
chr2	160200772	160253849	chr2:160200772-160253849	0	-	160200772	160200772	8553170	2	445,260,	0,52817,
#Partially deleted in new
chr2	160257717	160271880	chr2:160257717-160271880	3	-	160257717	160257717	789624	2	329,161,	0,14002,
#Partially deleted in new
chr2	160257839	160271249	chr2:160257839-160271249	0	-	160257839	160257839	8553170	2	207,124,	0,13286,
#Partially deleted in new
chr2	160272150	160493794	chr2:160272150-160493794	3	-	160275636	160493363	0	14	2614,85,81,111,51,94,50,116,80,158,92,59,176,506,	0,3479,5152,6397,9163,12624,12844,14818,28500,31179,41005,46018,95065,221138,
#Partially deleted in new
chr2	160272150	160493379	chr2:160272150-160493379	0	-	160272150	160272150	8553170	16	2614,85,81,111,51,48,94,50,116,80,158,92,59,176,110,91,	0,3479,5152,6397,9163,10106,12624,12844,14818,28500,31179,41005,46018,95065,160217,221138,
#Partially deleted in new
chr2	160272151	160367526	chr2:160272151-160367526	1	-	160275636	160367526	789624	14	2613,85,81,111,51,94,50,116,80,158,92,59,176,15,	0,3478,5151,6396,9162,12623,12843,14817,28499,31178,41004,46017,95064,95360,
#Partially deleted in new
chr2	160274459	160408609	chr2:160274459-160408609	1	-	160275636	160367367	789624	14	305,85,81,111,51,94,50,107,80,158,92,59,176,101,	0,1170,2843,4088,6854,10315,10535,12518,26191,28870,38696,43709,92756,134049,
#Partially deleted in new
chr2	160274459	160416178	chr2:160274459-160416178	1	-	160275636	160367367	789624	14	305,85,81,111,51,94,50,107,80,158,92,59,176,41,	0,1170,2843,4088,6854,10315,10535,12518,26191,28870,38696,43709,92756,141678,
#Partially deleted in new
chr2	160274459	160279766	chr2:160274459-160279766	0	-	160274459	160274459	8553170	3	305,85,2464,	0,1170,2843,
#Deleted in new
chr2	160274479	160276685	chr2:160274479-160276685	0	-	160274479	160274479	8553170	3	285,85,44,	0,1150,2162,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	160274517	160284867	chr2:160274517-160284867	0	-	160274517	160274517	8553170	5	247,85,81,111,3554,	0,1112,2785,4030,6796,
#Partially deleted in new
chr2	160274519	160407889	chr2:160274519-160407889	1	-	160275636	160367367	789624	14	245,85,81,111,51,94,50,107,80,158,92,59,176,426,	0,1110,2783,4028,6794,10255,10475,12458,26131,28810,38636,43649,92696,132944,
#Partially deleted in new
chr2	160274539	160283100	chr2:160274539-160283100	0	-	160274539	160274539	8553170	5	225,85,81,111,1787,	0,1090,2763,4008,6774,
#Partially deleted in new
chr2	160275398	160277372	chr2:160275398-160277372	0	-	160275398	160275398	8553170	2	316,70,	0,1904,
#Partially deleted in new
chr2	160284260	160493482	chr2:160284260-160493482	0	-	160284260	160284260	8553170	9	608,50,116,80,158,92,59,176,194,	0,734,2708,16390,19069,28895,33908,82955,209028,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	160302503	160318203	chr2:160302503-160318203	0	-	160302503	160302503	8553170	4	321,158,92,35,	0,826,10652,15665,
#Partially deleted in new
chr2	160303407	160416178	chr2:160303407-160416178	0	-	160303407	160367367	789624	6	80,92,59,176,135,41,	0,9748,14761,63808,98560,112730,
#Partially deleted in new
chr2	160366912	160492969	chr2:160366912-160492969	0	-	160366912	160366912	8553170	2	479,83,	0,125974,
#Deleted in new
chr2	160407809	160407882	chr2:160407809-160407882	3	-	160407809	160407809	5263520	1	73,	0,
#Deleted in new
chr2	160849312	160850676	chr2:160849312-160850676	3	-	160849312	160849312	8553170	1	1364,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	160877546	160877850	chr2:160877546-160877850	3	+	160877546	160877546	8553170	1	304,	0,
#Deleted in new
chr2	161048605	161050546	chr2:161048605-161050546	7	-	161048605	161048605	16724991	1	1941,	0,
#Partially deleted in new
chr2	161096230	161160224	chr2:161096230-161160224	3	-	161096230	161096230	8553170	3	338,72,93,	0,62934,63901,
#Partially deleted in new
chr2	161136907	161236187	chr2:161136907-161236187	3	+	161179662	161235518	0	8	156,148,109,119,77,116,581,846,	0,42706,66579,67767,87007,87723,94063,98434,
#Partially deleted in new
chr2	161136926	161224637	chr2:161136926-161224637	0	+	161179662	161224637	789624	6	137,148,112,119,77,7,	0,42687,66557,67748,86988,87704,
#Partially deleted in new
chr2	161136965	161180085	chr2:161136965-161180085	0	+	161136965	161136965	8553170	2	98,472,	0,42648,
#Partially deleted in new
chr2	161160296	161236172	chr2:161160296-161236172	1	+	161179662	161235518	0	8	190,148,109,119,77,116,581,831,	0,19317,43190,44378,63618,64334,70674,75045,
#Partially deleted in new
chr2	161160298	161204781	chr2:161160298-161204781	0	+	161179662	161204781	789624	4	186,148,109,107,	0,19315,43188,44376,
#Partially deleted in new
chr2	161160343	161231017	chr2:161160343-161231017	0	+	161179662	161231017	789624	7	143,148,112,119,77,116,47,	0,19270,43140,44331,63571,64287,70627,
#Deleted in new
chr2	161160343	161163518	chr2:161160343-161163518	0	+	161160343	161160343	8553170	3	141,128,405,	0,941,2770,
#Partially deleted in new
chr2	161160348	161235381	chr2:161160348-161235381	1	+	161161287	161235364	789624	8	138,128,148,112,119,77,116,40,	0,936,19265,43135,44326,63566,64282,74993,
#Partially deleted in new
chr2	161160348	161235381	chr2:161160348-161235381	1	+	161161287	161235364	789624	8	138,128,148,109,119,77,116,40,	0,936,19265,43138,44326,63566,64282,74993,
#Partially deleted in new
chr2	161160405	161224746	chr2:161160405-161224746	0	+	161179662	161219783	789624	7	79,148,109,119,119,72,116,	0,19208,43081,44269,59318,63514,64225,
#Deleted in new
chr2	161160426	161161651	chr2:161160426-161161651	0	+	161160426	161160426	8553170	2	60,367,	0,858,
#Partially deleted in new
chr2	161160427	161224640	chr2:161160427-161224640	0	+	161179662	161216439	789624	7	59,148,109,119,54,77,10,	0,19186,43059,44247,55961,63487,64203,
#Partially deleted in new
chr2	161160427	161204774	chr2:161160427-161204774	0	+	161179662	161202874	789624	5	59,148,117,109,100,	0,19186,42435,43059,44247,
#Deleted in new
chr2	161160431	161162890	chr2:161160431-161162890	0	+	161160431	161160431	8553170	4	55,128,95,358,	0,853,1381,2101,
#Partially deleted in new
chr2	161160436	161236221	chr2:161160436-161236221	1	+	161179662	161235390	789624	9	48,148,109,119,77,116,581,77,880,	0,19177,43050,44238,63478,64194,70534,72296,74905,
#Deleted in new
chr2	161160456	161161666	chr2:161160456-161161666	0	+	161160456	161160456	8553170	3	28,156,382,	0,492,828,
#Partially deleted in new
chr2	161160725	161224644	chr2:161160725-161224644	0	+	161160793	161224644	789624	6	97,148,109,119,77,14,	0,18888,42761,43949,63189,63905,
#Partially deleted in new
chr2	161179482	161231175	chr2:161179482-161231175	0	+	161179482	161179482	8553170	6	279,109,119,77,116,205,	0,24004,25192,44432,45148,51488,
#Partially deleted in new
chr2	161179620	161204979	chr2:161179620-161204979	1	+	161179662	161204826	0	3	141,109,305,	0,23866,25054,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	161179652	161197528	chr2:161179652-161197528	0	+	161179652	161179652	8553170	2	109,192,	0,17684,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	161222784	161254668	chr2:161222784-161254668	3	-	161222784	161222784	789624	4	699,62,227,84,	0,25739,28211,31800,
#Partially deleted in new
chr2	161223259	161251162	chr2:161223259-161251162	1	-	161223259	161223259	8553170	4	224,85,62,167,	0,3789,25264,27736,
#Deleted in new
chr2	161223399	161224705	chr2:161223399-161224705	0	+	161223399	161223399	8553170	3	419,77,75,	0,515,1231,
#Partially deleted in new
chr2	161223914	161236166	chr2:161223914-161236166	0	+	161223914	161232848	789624	5	77,116,581,103,825,	0,716,7056,8880,11427,
#Partially deleted in new
chr2	161231185	161235648	chr2:161231185-161235648	0	+	161231185	161235518	789624	3	366,54,307,	0,1570,4156,
#Deleted in new
chr2	161244738	161249050	chr2:161244738-161249050	3	+	161244738	161244738	789624	2	157,2176,	0,2136,
#Deleted in new
chr2	161244754	161247454	chr2:161244754-161247454	1	+	161244754	161244754	789624	3	141,44,580,	0,669,2120,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	161246246	161266090	chr2:161246246-161266090	1	-	161246246	161246246	8553170	6	368,62,227,96,254,89,	0,2277,4749,8338,19020,19755,
#Partially deleted in new
chr2	161246427	161308303	chr2:161246427-161308303	0	-	161246427	161246427	8553170	6	187,62,227,69,175,159,	0,2096,4568,23378,24081,61717,
#Deleted in new
chr2	161246427	161248578	chr2:161246427-161248578	0	-	161246427	161246427	8553170	2	147,55,	0,2096,
#Partially deleted in new
chr2	161246430	161266090	chr2:161246430-161266090	0	-	161246430	161246430	8553170	5	184,62,227,254,89,	0,2093,4565,18836,19571,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	161246433	161254630	chr2:161246433-161254630	0	-	161246433	161246433	8553170	5	181,155,62,227,46,	0,325,2090,4562,8151,
#Partially deleted in new
chr2	161246438	161266087	chr2:161246438-161266087	0	-	161246438	161246438	8553170	4	176,62,209,573,	0,2085,4557,19076,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	161246444	161254630	chr2:161246444-161254630	0	-	161246444	161246444	8553170	4	170,62,356,46,	0,2079,4422,8140,
#Partially deleted in new
chr2	161281901	161282618	chr2:161281901-161282618	7	+	161281901	161281901	16724991	1	717,	0,
#Partially deleted in new
chr2	161308037	161411717	chr2:161308037-161411717	3	+	161318825	161411400	0	12	567,133,52,72,120,71,151,108,75,126,63,416,	0,8399,10784,59440,59746,62069,63134,77426,83066,87040,100799,103264,
#Partially deleted in new
chr2	161308460	161319022	chr2:161308460-161319022	0	+	161308460	161308460	8553170	3	144,133,201,	0,7976,10361,
#Partially deleted in new
chr2	161308599	161370119	chr2:161308599-161370119	0	+	161318825	161370119	789624	6	187,133,52,72,120,13,	0,7837,10222,58878,59184,61507,
#Partially deleted in new
chr2	161340815	161341326	chr2:161340815-161341326	7	-	161340815	161340815	16724991	1	511,	0,
#Partially deleted in new
chr2	161381359	161411715	chr2:161381359-161411715	0	+	161381359	161381359	8553170	5	4212,75,126,63,414,	0,9744,13718,27477,29942,
#Deleted in new
chr2	161407527	161411715	chr2:161407527-161411715	0	+	161407527	161407527	8553170	2	1372,414,	0,3774,
#Deleted in new
chr2	161409553	161409670	chr2:161409553-161409670	7	+	161409553	161409553	16724991	1	117,	0,
#Partially deleted in new
chr2	161416093	161425870	chr2:161416093-161425870	3	+	161416410	161424227	789624	6	1009,155,122,159,62,2502,	0,1582,2107,2798,4102,7275,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	161416330	161423885	chr2:161416330-161423885	0	+	161416330	161416330	8553170	2	1500,5685,	0,1870,
#Partially deleted in new
chr2	161417778	161423776	chr2:161417778-161423776	0	+	161417778	161423776	789624	6	52,122,159,62,118,185,	0,422,1113,2417,5590,5813,
#Partially deleted in new
chr2	161417894	161424286	chr2:161417894-161424286	1	+	161418214	161424227	789624	5	193,122,159,62,918,	0,306,997,2301,5474,
#Partially deleted in new
chr2	161419209	161423685	chr2:161419209-161423685	0	+	161419209	161419209	8553170	3	82,62,317,	0,986,4159,
#Partially deleted in new
chr2	161419510	161423455	chr2:161419510-161423455	0	+	161419510	161419510	8553170	3	409,62,87,	0,685,3858,
#Deleted in new
chr2	161422658	161423577	chr2:161422658-161423577	3	-	161422658	161422658	8553170	2	186,216,	0,703,
#Deleted in new
chr2	161422658	161423135	chr2:161422658-161423135	1	-	161422658	161422658	8553170	2	186,217,	0,260,
#Deleted in new
chr2	161424014	161428774	chr2:161424014-161428774	3	+	161424014	161424014	8553170	2	226,334,	0,4426,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	161433873	161437458	chr2:161433873-161437458	3	+	161433873	161433873	8553170	1	3585,	0,
#Partially deleted in new
chr2	161500884	161507705	chr2:161500884-161507705	7	-	161500884	161500884	16724991	1	6821,	0,
#Partially deleted in new
chr2	161568501	161570185	chr2:161568501-161570185	7	-	161568501	161568501	16724991	1	1684,	0,
#Partially deleted in new
chr2	161580071	161581350	chr2:161580071-161581350	7	+	161580071	161580071	16724991	1	1279,	0,
#Partially deleted in new
chr2	161624334	161985275	chr2:161624334-161985275	1	+	161708748	161977734	789624	27	232,136,82,147,139,161,189,92,158,88,147,101,175,134,246,106,162,114,162,252,69,174,123,68,117,39,2097,	0,84359,146638,180114,215454,230635,238539,247958,254796,258022,270344,276576,279669,280441,281307,318457,323231,324813,326352,332654,334152,339800,340716,349914,352425,353387,358844,
#Partially deleted in new
chr2	161624337	161985282	chr2:161624337-161985282	3	+	161624518	161977734	789624	26	229,82,147,139,161,189,92,158,88,147,101,175,134,246,106,162,114,162,252,69,174,123,68,117,39,2104,	0,146635,180111,215451,230632,238536,247955,254793,258019,270341,276573,279666,280438,281304,318454,323228,324810,326349,332651,334149,339797,340713,349911,352422,353384,358841,
#Partially deleted in new
chr2	161624399	161901160	chr2:161624399-161901160	0	+	161624399	161624399	8553170	15	167,136,127,134,82,147,139,161,189,92,90,158,88,147,250,	0,84294,85362,86218,146573,180049,215389,230570,238474,247893,249516,254731,257957,270279,276511,
#Partially deleted in new
chr2	161624417	161873921	chr2:161624417-161873921	0	+	161624417	161624417	8553170	9	149,136,82,147,139,161,189,92,128,	0,84276,146555,180031,215371,230552,238456,247875,249376,
#Partially deleted in new
chr2	161624425	161983245	chr2:161624425-161983245	1	+	161624518	161983245	789624	25	141,82,147,139,161,189,92,158,88,147,101,175,134,246,106,162,114,162,252,69,174,123,68,117,67,	0,146547,180023,215363,230544,238448,247867,254705,257931,270253,276485,279578,280350,281216,318366,323140,324722,326261,332563,334061,339709,340625,349823,352334,358753,
#Partially deleted in new
chr2	161624425	161985253	chr2:161624425-161985253	1	+	161624518	161977734	789624	27	141,82,147,139,161,189,92,90,158,88,147,101,175,134,246,106,162,114,162,252,69,174,123,68,117,39,2075,	0,146547,180023,215363,230544,238448,247867,249490,254705,257931,270253,276485,279578,280350,281216,318366,323140,324722,326261,332563,334061,339709,340625,349823,352334,353296,358753,
#Partially deleted in new
chr2	161624434	161839876	chr2:161624434-161839876	0	+	161624434	161624434	8553170	5	132,134,82,147,88,	0,86183,146538,180014,215354,
#Partially deleted in new
chr2	161624460	161983359	chr2:161624460-161983359	1	+	161624518	161983184	789624	24	106,82,147,139,161,189,92,90,158,88,147,101,175,134,246,106,162,114,162,252,69,174,123,181,	0,146512,179988,215328,230509,238413,247832,249455,254670,257896,270218,276450,279543,280315,281181,318331,323105,324687,326226,332528,334026,339674,340590,358718,
#Partially deleted in new
chr2	161624460	161983359	chr2:161624460-161983359	0	+	161624518	161902085	789624	27	106,82,147,139,161,189,92,158,88,147,101,137,175,134,246,106,162,114,162,252,69,174,123,68,117,39,181,	0,146512,179988,215328,230509,238413,247832,254670,257896,270218,276450,277567,279543,280315,281181,318331,323105,324687,326226,332528,334026,339674,340590,349788,352299,353261,358718,
#Deleted in new
chr2	161931198	161931466	chr2:161931198-161931466	7	-	161931198	161931198	16724991	1	268,	0,
#Partially deleted in new
chr2	161992240	162074542	chr2:161992240-162074542	3	-	161993282	162073981	0	26	1144,74,73,65,100,55,195,70,99,48,122,54,68,108,45,136,113,161,121,73,53,81,92,99,88,567,	0,2720,3059,13504,16321,17000,19552,22155,24527,24867,26488,26982,27988,28340,30514,32563,41300,42923,46061,46708,46891,53291,54674,55162,81158,81735,
#Partially deleted in new
chr2	161993282	162074122	chr2:161993282-162074122	0	-	162038402	162073981	789624	27	102,74,73,65,100,55,195,70,99,48,122,54,68,108,45,136,231,113,161,121,77,53,81,92,96,88,147,	0,1678,2017,12462,15279,15958,18510,21113,23485,23825,25446,25940,26946,27298,29472,31521,38752,40258,41881,45019,45662,45849,52249,53632,54120,80116,80693,
#Partially deleted in new
chr2	161994960	162017551	chr2:161994960-162017551	0	-	161994960	161994960	8553170	10	74,73,65,100,55,195,70,99,48,190,	0,339,10784,13601,14280,16832,19435,21807,22147,22401,
#Partially deleted in new
chr2	161995177	162073486	chr2:161995177-162073486	0	-	161995177	161995177	8553170	23	195,65,100,55,195,70,99,48,122,54,68,108,45,136,113,161,121,73,53,81,92,99,88,	0,10567,13384,14063,16615,19218,21590,21930,23551,24045,25051,25403,27577,29626,38363,39986,43124,43771,43954,50354,51737,52225,78221,
#Deleted in new
chr2	162005644	162014462	chr2:162005644-162014462	0	-	162005644	162005644	8553170	5	165,100,55,195,67,	0,2917,3596,6148,8751,
#Deleted in new
chr2	162016819	162021593	chr2:162016819-162021593	0	-	162016819	162016819	8553170	7	47,48,122,54,68,108,135,	0,288,1909,2403,3409,3761,4639,
#Partially deleted in new
chr2	162038341	162047498	chr2:162038341-162047498	0	-	162046733	162047498	789624	6	81,73,81,104,92,96,	0,607,7190,8360,8573,9061,
#Partially deleted in new
chr2	162038341	162073596	chr2:162038341-162073596	0	-	162038341	162038341	8553170	8	81,73,53,81,104,92,99,198,	0,607,790,7190,8360,8573,9061,35057,
#Partially deleted in new
chr2	162038373	162073463	chr2:162038373-162073463	0	-	162038373	162038373	8553170	6	49,73,81,305,99,65,	0,575,7158,8328,9029,35025,
#Partially deleted in new
chr2	162038987	162074002	chr2:162038987-162074002	0	-	162046733	162073981	789624	8	34,53,81,104,92,99,88,27,	0,144,6544,7714,7927,8415,34411,34988,
#Partially deleted in new
chr2	162046733	162074057	chr2:162046733-162074057	1	-	162046733	162073981	789624	5	72,92,99,88,82,	0,181,669,26665,27242,
#Deleted in new
chr2	162073255	162075169	chr2:162073255-162075169	3	+	162073255	162073255	8553170	3	82,172,386,	0,156,1528,
#Partially deleted in new
chr2	162077356	162077651	chr2:162077356-162077651	7	-	162077356	162077356	16724991	1	295,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	162088258	162090072	chr2:162088258-162090072	7	+	162088258	162088258	16724991	1	1814,	0,
#Deleted in new
chr2	162092231	162095032	chr2:162092231-162095032	3	+	162092231	162092231	8553170	2	320,589,	0,2212,
#Deleted in new
chr2	162093428	162094854	chr2:162093428-162094854	0	+	162093428	162093428	8553170	2	208,411,	0,1015,
#Deleted in new
chr2	162142872	162152403	chr2:162142872-162152403	3	-	162143363	162149178	0	6	498,144,138,162,101,246,	0,1154,2667,4480,6214,9285,
#Deleted in new
chr2	162143177	162144415	chr2:162143177-162144415	0	-	162143177	162143177	8553170	2	193,389,	0,849,
#Deleted in new
chr2	162143904	162152404	chr2:162143904-162152404	1	-	162143904	162149178	0	6	7,144,138,162,101,247,	0,122,1635,3448,5182,8253,
#Deleted in new
chr2	162144694	162147393	chr2:162144694-162147393	0	-	162144694	162144694	8553170	2	983,41,	0,2658,
#Deleted in new
chr2	162145358	162152237	chr2:162145358-162152237	0	-	162145358	162145358	8553170	4	319,162,101,80,	0,1994,3728,6799,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	162159761	162169698	chr2:162159761-162169698	0	+	162159761	162159761	8553170	4	153,135,102,242,	0,2005,3228,9695,
#Partially deleted in new
chr2	162159817	162173223	chr2:162159817-162173223	3	+	162159817	162159817	8553170	4	97,132,102,3767,	0,1952,3172,9639,
#Partially deleted in new
chr2	162170683	162198826	chr2:162170683-162198826	0	-	162198290	162198826	789624	13	397,74,73,65,100,55,195,70,99,48,171,120,70,	0,2127,2465,3039,4183,12730,17485,18419,18972,24017,26886,27495,28073,
#Partially deleted in new
chr2	162170683	162173781	chr2:162170683-162173781	0	-	162173137	162173781	789624	4	397,74,167,59,	0,2127,2371,3039,
#Partially deleted in new
chr2	162170684	162176669	chr2:162170684-162176669	0	-	162170684	162170684	8553170	5	396,74,73,65,1803,	0,2126,2464,3038,4182,
#Partially deleted in new
chr2	162170689	162243535	chr2:162170689-162243535	3	-	162170978	162243327	0	26	391,74,73,65,100,55,195,70,99,48,125,54,71,105,45,136,104,155,121,73,53,75,95,99,85,214,	0,2121,2459,3033,4177,12724,17479,18413,18966,24011,28067,29876,32182,32351,39262,43248,45208,47296,48373,49163,52918,53776,54793,55833,72218,72632,
#Partially deleted in new
chr2	162170689	162242998	chr2:162170689-162242998	1	-	162170978	162242998	789624	26	391,74,73,65,100,55,195,70,99,48,125,54,71,105,45,136,104,155,121,73,53,75,95,99,85,3,	0,2121,2459,3033,4177,12724,17479,18413,18966,24011,28067,29876,32182,32351,39262,43248,45208,47296,48373,49163,52918,53776,54793,55833,72218,72306,
#Partially deleted in new
chr2	162170717	162243456	chr2:162170717-162243456	1	-	162170978	162243327	789624	25	363,74,73,65,100,55,195,70,99,48,125,54,71,105,45,136,104,155,121,73,53,95,99,85,135,	0,2093,2431,3005,4149,12696,17451,18385,18938,23983,28039,29848,32154,32323,39234,43220,45180,47268,48345,49135,52890,54765,55805,72190,72604,
#Partially deleted in new
chr2	162172840	162183583	chr2:162172840-162183583	0	-	162172840	162172840	8553170	5	44,73,65,100,170,	0,308,882,2026,10573,
#Deleted in new
chr2	162188171	162195037	chr2:162188171-162195037	0	-	162188171	162188171	8553170	4	192,70,99,337,	0,931,1484,6529,
#Deleted in new
chr2	162193558	162198842	chr2:162193558-162198842	0	-	162193558	162193558	8553170	3	622,48,86,	0,1142,5198,
#Partially deleted in new
chr2	162198623	162203145	chr2:162198623-162203145	0	-	162198623	162198623	8553170	4	258,54,71,105,	0,1942,4248,4417,
#Partially deleted in new
chr2	162209619	162243413	chr2:162209619-162243413	0	-	162209619	162209619	8553170	11	377,136,104,155,121,73,53,75,95,85,92,	0,4318,6278,8366,9443,10233,13988,14846,15863,33288,33702,
#Partially deleted in new
chr2	162219141	162243048	chr2:162219141-162243048	0	-	162219141	162242935	789624	7	42,73,53,75,95,99,141,	0,711,4466,5324,6341,7381,23766,
#Partially deleted in new
chr2	162219856	162243102	chr2:162219856-162243102	0	-	162221696	162242935	789624	7	69,120,53,75,95,99,195,	0,1736,3751,4609,5626,6666,23051,
#Deleted in new
chr2	162243346	162245151	chr2:162243346-162245151	0	-	162243346	162243346	8553170	2	154,408,	0,1397,
#Partially deleted in new
chr2	162267078	162318703	chr2:162267078-162318703	3	-	162267199	162318307	0	16	301,91,191,162,150,260,279,124,117,218,211,221,105,147,169,849,	0,400,1008,5147,6716,9608,10336,11126,12917,14249,15287,21056,26485,39630,43686,50776,
#Partially deleted in new
chr2	162267078	162318652	chr2:162267078-162318652	1	-	162267199	162318307	8553170	16	301,91,191,162,150,260,279,124,117,218,211,221,105,147,169,798,	0,400,1008,5147,6716,9608,10336,11126,12917,14249,15287,21056,26485,39630,43686,50776,
#Partially deleted in new
chr2	162267092	162311299	chr2:162267092-162311299	0	-	162267092	162267092	8553170	16	287,91,191,162,150,260,279,124,117,218,211,221,105,147,169,63,	0,386,994,5133,6702,9594,10322,11112,12903,14235,15273,21042,26471,39616,43672,44144,
#Partially deleted in new
chr2	162267094	162318475	chr2:162267094-162318475	1	-	162267199	162318307	8553170	15	285,91,191,162,150,260,279,124,218,211,221,105,147,169,621,	0,384,992,5131,6700,9592,10320,11110,14233,15271,21040,26469,39614,43670,50760,
#Deleted in new
chr2	162267247	162268137	chr2:162267247-162268137	0	-	162267247	162267247	8553170	2	132,659,	0,231,
#Partially deleted in new
chr2	162293563	162307170	chr2:162293563-162307170	0	-	162293563	162293563	8553170	2	105,462,	0,13145,
#Partially deleted in new
chr2	162310146	162318684	chr2:162310146-162318684	1	-	162310720	162318307	0	2	787,830,	0,7708,
#Partially deleted in new
chr2	162318839	162356834	chr2:162318839-162356834	0	+	162318839	162318839	8553170	6	344,114,165,70,44,77,	0,442,28738,33498,37598,37918,
#Partially deleted in new
chr2	162318883	162356813	chr2:162318883-162356813	0	+	162319134	162356813	789624	5	356,165,70,44,56,	0,28694,33454,37554,37874,
#Partially deleted in new
chr2	162319033	162361098	chr2:162319033-162361098	1	+	162347607	162360760	789624	5	192,165,70,44,353,	0,28544,33304,37404,41712,
#Partially deleted in new
chr2	162344087	162361420	chr2:162344087-162361420	3	+	162344248	162360243	0	8	188,165,70,44,148,114,59,1204,	0,3490,8250,12350,12670,14956,15406,16129,
#Partially deleted in new
chr2	162344133	162356665	chr2:162344133-162356665	0	+	162344133	162344133	8553170	4	142,165,70,228,	0,3444,8204,12304,
#Partially deleted in new
chr2	162344134	162356905	chr2:162344134-162356905	0	+	162347607	162356905	789624	6	141,84,165,70,44,148,	0,2447,3443,8203,12303,12623,
#Partially deleted in new
chr2	162344158	162360971	chr2:162344158-162360971	0	+	162344158	162344158	8553170	7	117,165,70,44,148,509,755,	0,3419,8179,12279,12599,14885,16058,
#Partially deleted in new
chr2	162344181	162356981	chr2:162344181-162356981	0	+	162344181	162344181	8553170	5	94,165,70,44,224,	0,3396,8156,12256,12576,
#Partially deleted in new
chr2	162344337	162361122	chr2:162344337-162361122	1	+	162347607	162360243	789624	8	188,165,70,44,148,114,59,906,	0,3240,8000,12100,12420,14706,15156,15879,
#Partially deleted in new
chr2	162356437	162371595	chr2:162356437-162371595	0	+	162356437	162371380	789624	5	44,148,114,59,290,	0,320,2606,3056,14868,
#Partially deleted in new
chr2	162371406	162838618	chr2:162371406-162838618	3	-	162371828	162838518	789624	16	689,193,169,252,97,206,253,200,400,426,215,21,429,156,231,176,	0,2063,8446,13281,22982,25333,28782,51929,63791,74611,133036,141247,146323,165518,465130,467036,
#Partially deleted in new
chr2	162371406	162538076	chr2:162371406-162538076	1	-	162371828	162538076	789624	15	689,193,169,252,97,206,253,200,400,426,215,21,429,156,7,	0,2063,8446,13281,22982,25333,28782,51929,63791,74611,133036,141247,146323,165518,166663,
#Partially deleted in new
chr2	162423246	162838730	chr2:162423246-162838730	1	-	162423269	162838518	789624	8	289,400,426,215,429,156,231,288,	0,11951,22771,81196,94483,113678,413290,415196,
#Partially deleted in new
chr2	162423269	162537081	chr2:162423269-162537081	1	-	162423269	162537081	789624	6	266,400,426,215,429,157,	0,11928,22748,81173,94460,113655,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	162496935	162497051	chr2:162496935-162497051	7	+	162496935	162496935	16724991	1	116,	0,
#Partially deleted in new
chr2	162501984	162528360	chr2:162501984-162528360	0	-	162501984	162501984	8553170	5	310,215,429,165,177,	0,2458,15745,25938,26199,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	162768935	162797972	chr2:162768935-162797972	3	+	162768935	162768935	789624	5	53,61,140,168,2577,	0,2995,15661,16057,26460,
#Partially deleted in new
chr2	163152250	163153307	chr2:163152250-163153307	7	-	163152250	163152250	16724991	2	511,240,	0,817,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	163288994	163289096	chr2:163288994-163289096	3	+	163288994	163288994	8553170	1	102,	0,
#Partially deleted in new
chr2	163593395	163736012	chr2:163593395-163736012	1	-	163593731	163734927	789624	3	401,170,175,	0,141507,142442,
#Partially deleted in new
chr2	163602610	163736007	chr2:163602610-163736007	3	-	163609551	163734927	789624	3	9196,170,170,	0,132292,133227,
#Partially deleted in new
chr2	163611353	163735984	chr2:163611353-163735984	0	-	163611353	163611353	8553170	2	453,147,	0,124484,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	163749572	164352223	chr2:163749572-164352223	3	-	163749572	163749572	8553170	5	335,104,79,92,104,	0,119576,200608,501147,602547,
#Deleted in new
chr2	164213538	164214414	chr2:164213538-164214414	7	+	164213538	164213538	16724991	1	876,	0,
#Deleted in new
chr2	164321932	164322223	chr2:164321932-164322223	7	+	164321932	164321932	16724991	1	291,	0,
#Partially deleted in new
chr2	164492811	164621392	chr2:164492811-164621392	0	-	164492811	164492811	8553170	14	371,94,88,73,117,81,149,111,138,75,122,157,133,274,	0,1619,4196,4399,4562,9443,15643,15930,29168,32192,34202,54848,126875,128307,
#Partially deleted in new
chr2	164492815	164621848	chr2:164492815-164621848	3	-	164493035	164621309	0	14	367,94,88,73,117,81,96,111,138,75,122,157,133,730,	0,1615,4192,4395,4558,9439,15639,15926,29164,32188,34198,54844,126871,128303,
#Partially deleted in new
chr2	164492821	164497052	chr2:164492821-164497052	0	-	164492821	164492821	8553170	2	361,45,	0,4186,
#Partially deleted in new
chr2	164497007	164621478	chr2:164497007-164621478	0	-	164497007	164621290	789624	12	88,73,117,81,96,111,138,75,122,157,133,244,	0,203,366,5247,11447,11734,24972,27996,30006,50652,122679,124227,
#Partially deleted in new
chr2	164508662	164568484	chr2:164508662-164568484	0	-	164508662	164508662	8553170	7	190,138,75,122,132,157,170,	0,13317,16341,18351,31103,38997,59652,
#Partially deleted in new
chr2	164525041	164619957	chr2:164525041-164619957	0	-	164525041	164619836	789624	4	37,122,157,271,	0,1972,22618,94645,
#Deleted in new
chr2	164573740	164574054	chr2:164573740-164574054	7	+	164573740	164573740	16724991	1	314,	0,
#Partially deleted in new
chr2	164653623	164692346	chr2:164653623-164692346	0	-	164653623	164653623	8553170	3	291,55,126,	0,12223,38597,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	164680185	164842168	chr2:164680185-164842168	1	-	164685945	164842020	0	15	5847,177,1565,95,235,117,75,154,237,98,229,202,189,91,212,	0,12035,14083,19219,20336,22918,24258,24766,41889,42239,47783,49728,63501,160970,161771,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	164680187	164841418	chr2:164680187-164841418	1	-	164685945	164841196	0	13	5845,177,1568,95,235,75,154,237,98,229,202,189,263,	0,12033,14081,19217,20334,24256,24764,41887,42237,47781,49726,63499,160968,
#Partially deleted in new
chr2	164684764	164841412	chr2:164684764-164841412	1	-	164685945	164841196	0	14	1268,177,1565,95,235,117,75,154,237,98,229,202,189,257,	0,7456,9504,14640,15757,18339,19679,20187,37310,37660,43204,45149,58922,156391,
#Partially deleted in new
chr2	164684815	164842025	chr2:164684815-164842025	2	-	164685945	164842025	789624	14	1217,177,1568,95,235,75,154,237,98,229,202,189,91,69,	0,7405,9453,14589,15706,19628,20136,37259,37609,43153,45098,58871,156340,157141,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	164684824	164725007	chr2:164684824-164725007	0	-	164684824	164684824	8553170	9	1208,177,1568,95,235,75,154,237,2583,	0,7396,9444,14580,15697,19619,20127,37250,37600,
#Deleted in new
chr2	164685820	164698300	chr2:164685820-164698300	0	-	164685820	164685820	8553170	3	212,177,4032,	0,6400,8448,
#Deleted in new
chr2	164687286	164687596	chr2:164687286-164687596	7	-	164687286	164687286	16724991	1	310,	0,
#Deleted in new
chr2	164687642	164687777	chr2:164687642-164687777	3	-	164687642	164687642	789624	1	135,	0,
#Deleted in new
chr2	164692636	164694737	chr2:164692636-164694737	0	-	164692636	164692636	8553170	2	70,469,	0,1632,
#Partially deleted in new
chr2	164700552	164841823	chr2:164700552-164841823	0	-	164703660	164841196	789624	13	204,117,44,75,154,237,98,39,229,202,189,91,114,	0,2551,3075,3891,4399,21522,21872,26553,27416,29361,43134,140603,141157,
#Partially deleted in new
chr2	164700606	164842404	chr2:164700606-164842404	0	-	164700606	164700606	8553170	5	150,75,154,91,134,	0,3837,4345,140549,141664,
#Partially deleted in new
chr2	164700677	164705377	chr2:164700677-164705377	0	-	164700677	164700677	8553170	3	79,75,426,	0,3766,4274,
#Partially deleted in new
chr2	164704951	164841823	chr2:164704951-164841823	0	-	164704951	164704951	8553170	4	154,189,91,85,	0,38735,136204,136787,
#Deleted in new
chr2	164721816	164722491	chr2:164721816-164722491	0	-	164721816	164721816	8553170	2	495,67,	0,608,
#Partially deleted in new
chr2	164722305	164773754	chr2:164722305-164773754	0	-	164722305	164773754	789624	6	6,98,229,202,189,48,	0,119,5663,7608,21381,51401,
#Partially deleted in new
chr2	164722491	164842114	chr2:164722491-164842114	0	-	164722491	164842044	789624	6	31,39,229,202,91,158,	0,4614,5477,7422,118664,119465,
#Partially deleted in new
chr2	164728158	164843679	chr2:164728158-164843679	0	-	164728158	164841196	789624	5	39,202,189,91,28,	0,1755,15528,112997,115493,
#Partially deleted in new
chr2	164728160	164841221	chr2:164728160-164841221	0	-	164728160	164837489	789624	5	37,202,189,71,66,	0,1753,15526,109267,112995,
#Partially deleted in new
chr2	164728184	164841823	chr2:164728184-164841823	0	-	164728184	164779761	789624	6	13,202,189,131,88,114,	0,1729,15502,51470,112971,113525,
#Partially deleted in new
chr2	164729929	164841850	chr2:164729929-164841850	0	-	164729929	164841196	789624	4	186,189,88,112,	0,13757,111226,111809,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	164738245	164772046	chr2:164738245-164772046	0	-	164738245	164738245	8553170	4	44,189,171,103,	0,5441,23037,33698,
#Partially deleted in new
chr2	164743188	164773733	chr2:164743188-164773733	0	-	164743188	164743188	8553170	2	687,27,	0,30518,
#Partially deleted in new
chr2	164743453	164841984	chr2:164743453-164841984	0	-	164743453	164743453	8553170	3	422,91,28,	0,97702,98503,
#Partially deleted in new
chr2	164743453	164842140	chr2:164743453-164842140	0	-	164743453	164743453	8553170	3	422,91,431,	0,97702,98256,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	164840671	165094117	chr2:164840671-165094117	1	+	164840671	164840671	8553170	8	151,561,88,199,75,69,180,2288,	0,8170,104912,109263,118583,120227,250448,251158,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	164840745	165081536	chr2:164840745-165081536	1	+	164840745	164840745	8553170	8	77,561,122,88,199,106,162,1324,	0,8096,71568,104838,109189,118509,236874,239467,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	164858431	164858546	chr2:164858431-164858546	7	+	164858431	164858431	16724991	1	115,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	164895676	164895777	chr2:164895676-164895777	7	-	164895676	164895676	16724991	1	101,	0,
#Partially deleted in new
chr2	164896185	164955525	chr2:164896185-164955525	1	-	164898436	164952767	789624	10	2545,132,113,162,71,80,107,135,75,317,	0,12454,15450,18926,19717,41164,43264,49407,56521,59023,
#Partially deleted in new
chr2	164898328	164955486	chr2:164898328-164955486	3	-	164898436	164952767	789624	11	402,132,113,162,71,80,107,66,135,75,278,	0,10311,13307,16783,17574,39021,41121,46240,47264,54378,56880,
#Partially deleted in new
chr2	164898333	164955477	chr2:164898333-164955477	1	-	164898436	164955247	789624	11	397,132,113,162,71,80,107,66,135,115,269,	0,10306,13302,16778,17569,39016,41116,46235,47259,56297,56875,
#Partially deleted in new
chr2	164898373	164955246	chr2:164898373-164955246	1	-	164898436	164952767	789624	13	357,132,113,162,71,80,107,66,135,75,91,115,38,	0,10266,13262,16738,17529,38976,41076,46195,47219,54333,54768,56257,56835,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	164898527	164912086	chr2:164898527-164912086	0	-	164898527	164898527	8553170	3	203,132,451,	0,10112,13108,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	164898607	164911940	chr2:164898607-164911940	0	-	164898607	164898607	8553170	4	123,136,132,305,	0,9347,10032,13028,
#Partially deleted in new
chr2	164898668	164937423	chr2:164898668-164937423	0	-	164898668	164937423	789624	5	62,132,113,71,74,	0,9971,12967,17234,38681,
#Partially deleted in new
chr2	164911657	164937697	chr2:164911657-164937697	0	-	164911657	164911657	8553170	5	91,162,71,80,173,	0,3454,4245,25692,25867,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	164912311	164993569	chr2:164912311-164993569	0	+	164912311	164912311	8553170	8	124,88,199,31,89,106,69,109,	0,33272,37623,44453,46743,46943,48587,81149,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	164912313	164993569	chr2:164912313-164993569	0	+	164912313	164912313	8553170	7	122,88,199,89,106,69,109,	0,33270,37621,46741,46941,48585,81147,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	164912332	164959082	chr2:164912332-164959082	0	+	164912332	164912332	8553170	5	103,211,88,199,28,	0,9745,33251,37602,46722,
#Partially deleted in new
chr2	164915424	164939503	chr2:164915424-164939503	0	-	164915424	164915424	8553170	3	549,80,54,	0,21925,24025,
#Partially deleted in new
chr2	164944561	164953283	chr2:164944561-164953283	0	-	164944561	164944561	8553170	3	73,135,577,	0,1031,8145,
#Partially deleted in new
chr2	164950063	164963093	chr2:164950063-164963093	0	+	164950063	164950063	8553170	4	70,106,69,177,	0,9191,10835,12853,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	164991983	165091293	chr2:164991983-165091293	1	+	164991983	164991983	8553170	4	185,114,162,174,	0,1477,85636,99136,
#Partially deleted in new
chr2	164992130	165130426	chr2:164992130-165130426	2	+	164992130	164992130	8553170	4	38,180,180,382,	0,1330,98989,137914,
#Partially deleted in new
chr2	164992156	165208261	chr2:164992156-165208261	0	+	164992156	164992156	8553170	7	12,180,180,160,111,188,149,	0,1304,98963,137888,147442,202739,215956,
#Partially deleted in new
chr2	165087521	165204067	chr2:165087521-165204067	1	-	165090149	165176394	789624	28	3824,271,105,138,54,273,123,174,155,121,471,357,174,239,133,348,291,207,142,64,273,92,129,90,119,314,197,245,	0,4732,6852,7989,8945,9730,12780,25363,26294,27933,40109,42418,43722,50357,51954,53129,59217,66930,68240,74786,75034,76280,76870,81214,82908,88609,99029,116301,
#Partially deleted in new
chr2	165087529	165204043	chr2:165087529-165204043	3	-	165090149	165176394	789624	28	3816,271,105,138,54,273,123,174,155,121,471,357,174,239,133,348,291,207,142,64,273,92,129,90,119,314,197,221,	0,4724,6844,7981,8937,9722,12772,25355,26286,27925,40101,42410,43714,50349,51946,53121,59209,66922,68232,74778,75026,76088,76862,81206,82900,88601,99021,116293,
#Partially deleted in new
chr2	165087529	165186620	chr2:165087529-165186620	0	-	165122893	165176394	789624	29	3816,271,105,138,54,273,123,174,155,121,27,106,471,357,174,239,133,297,291,207,142,64,273,92,129,90,119,314,70,	0,4724,6844,7981,8937,9722,12772,25355,26286,27925,32220,35264,40101,42410,43714,50349,51946,53172,59209,66922,68232,74778,75026,76272,76862,81206,82900,88601,99021,
#Partially deleted in new
chr2	165087541	165186747	chr2:165087541-165186747	0	-	165138110	165176394	789624	27	3804,271,105,138,54,273,123,174,155,121,471,357,174,239,133,214,291,207,142,64,273,92,129,90,119,314,197,	0,4712,6832,7969,8925,9710,12760,25343,26274,27913,40089,42398,43702,50337,51934,53243,59197,66910,68220,74766,75014,76076,76850,81194,82888,88589,99009,
#Partially deleted in new
chr2	165087541	165203881	chr2:165087541-165203881	1	-	165090149	165176394	789624	28	3804,271,105,126,54,273,123,174,155,121,471,357,174,239,133,297,291,207,142,64,273,92,129,90,119,314,197,59,	0,4712,6832,7969,8925,9710,12760,25343,26274,27913,40089,42398,43702,50337,51934,53160,59197,66910,68220,74766,75014,76076,76850,81194,82888,88589,99009,116281,
#Partially deleted in new
chr2	165089717	165203886	chr2:165089717-165203886	1	-	165090149	165176394	789624	28	1628,271,105,138,54,273,123,174,155,121,471,357,174,239,133,201,291,207,142,64,273,92,129,90,119,314,197,64,	0,2536,4656,5793,6749,7534,10584,23167,24098,25737,37913,40222,41526,48161,49758,51080,57021,64734,66044,72590,72838,74084,74674,79018,80712,86413,96833,114105,
#Partially deleted in new
chr2	165091139	165195564	chr2:165091139-165195564	1	+	165091139	165091139	8553170	3	160,160,438,	0,38905,103987,
#Partially deleted in new
chr2	165092255	165093828	chr2:165092255-165093828	0	-	165092255	165092255	8553170	2	269,262,	0,1311,
#Deleted in new
chr2	165095510	165097614	chr2:165095510-165097614	0	-	165095510	165095510	8553170	3	138,54,363,	0,956,1741,
#Partially deleted in new
chr2	165097251	165186554	chr2:165097251-165186554	0	-	165097251	165176394	789624	22	273,123,174,155,121,471,357,174,239,133,201,291,207,142,64,273,92,129,90,119,314,4,	0,3050,15633,16564,18203,30379,32688,33992,40627,42224,43546,49487,57200,58510,65056,65304,66366,67140,71484,73178,78879,89299,
#Partially deleted in new
chr2	165164392	165204050	chr2:165164392-165204050	0	-	165164392	165176394	789624	7	128,90,119,314,140,197,228,	0,4343,6037,11738,15159,22158,39430,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	165194992	165274338	chr2:165194992-165274338	0	+	165194992	165194992	8553170	3	91,153,7925,	0,13120,71421,
#Partially deleted in new
chr2	165239371	165392310	chr2:165239371-165392310	0	+	165295823	165327201	789624	29	269,318,119,90,129,92,273,64,142,207,288,345,133,48,135,239,174,357,480,121,155,174,123,282,54,138,105,271,3682,	0,56401,57645,68476,69294,69980,70951,72653,74248,74530,76099,83784,87480,87783,89032,91958,102924,105183,114820,125771,127845,130754,133853,135313,138225,141220,141721,147374,149257,
#Partially deleted in new
chr2	165239401	165392308	chr2:165239401-165392308	1	+	165295823	165389824	0	27	239,318,119,90,129,92,273,64,142,207,288,345,133,239,174,357,480,121,155,174,123,282,54,138,105,271,3680,	0,56371,57615,68446,69264,69950,70921,72623,74218,74500,76069,83754,87450,91928,102894,105153,114790,125741,127815,130724,133823,135283,138195,141190,141691,147344,149227,
#Partially deleted in new
chr2	165239401	165315604	chr2:165239401-165315604	0	+	165295823	165315604	789624	11	239,318,119,90,129,92,273,64,142,207,134,	0,56371,57615,68446,69264,69950,70921,72623,74218,74500,76069,
#Partially deleted in new
chr2	165239437	165331568	chr2:165239437-165331568	0	+	165295823	165296102	789624	14	203,530,119,90,129,92,273,64,142,207,288,345,1687,239,	0,56335,57579,68410,69228,69914,70885,72587,74182,74464,76033,83718,87414,91892,
#Partially deleted in new
chr2	165239444	165327761	chr2:165239444-165327761	0	+	165239444	165239444	8553170	15	196,116,318,119,90,129,92,273,64,142,207,288,345,133,607,	0,4264,56328,57572,68403,69221,69907,70878,72580,74175,74457,76026,83711,87407,87710,
#Partially deleted in new
chr2	165239444	165392310	chr2:165239444-165392310	1	+	165307857	165389824	789624	27	196,423,119,90,129,92,273,64,142,207,288,345,133,239,174,357,480,121,155,174,123,282,54,138,105,271,3682,	0,56435,57572,68403,69221,69907,70878,72580,74175,74457,76026,83711,87407,91885,102851,105110,114747,125698,127772,130681,133780,135240,138152,141147,141648,147301,149184,
#Partially deleted in new
chr2	165239487	165392032	chr2:165239487-165392032	1	+	165295823	165389824	0	27	153,318,119,90,129,92,273,64,142,207,288,345,133,239,174,357,480,121,155,174,123,282,54,138,105,271,3404,	0,56285,57529,68360,69178,69677,70835,72537,74132,74414,75983,83668,87364,91842,102808,105067,114704,125655,127729,130638,133737,135197,138109,141104,141605,147258,149141,
#Partially deleted in new
chr2	165239968	165327753	chr2:165239968-165327753	0	+	165239968	165239968	8553170	14	140,211,119,90,129,92,273,64,142,207,288,345,133,599,	0,55911,57048,67879,68697,69383,70354,72056,73651,73933,75502,83187,86883,87186,
#Partially deleted in new
chr2	165241059	165392310	chr2:165241059-165392310	1	+	165295823	165389824	0	27	55,318,119,90,129,92,273,64,142,207,288,345,133,239,174,357,480,121,155,174,123,282,54,138,105,271,3682,	0,54713,55957,66788,67606,68292,69263,70965,72560,72842,74411,82096,85792,90270,101236,103495,113132,124083,126157,129066,132165,133625,136537,139532,140033,145686,147569,
#Deleted in new
chr2	165285252	165286048	chr2:165285252-165286048	7	+	165285252	165285252	16724991	1	796,	0,
#Partially deleted in new
chr2	165294030	165392310	chr2:165294030-165392310	3	+	165295823	165389824	0	27	105,318,119,90,129,92,273,64,142,207,288,345,133,239,174,357,480,121,155,174,123,282,54,138,105,271,3682,	0,1742,2986,13817,14635,15321,16292,17994,19589,19871,21440,29125,32821,37299,48265,50524,60161,71112,73186,76095,79194,80654,83566,86561,87062,92715,94598,
#Partially deleted in new
chr2	165294036	165392310	chr2:165294036-165392310	0	+	165295823	165296102	789624	27	99,1120,119,90,129,92,273,64,142,207,288,345,133,239,174,357,480,121,155,174,123,282,54,138,105,271,3682,	0,1736,2980,13811,14629,15315,16286,17988,19583,19865,21434,29119,32815,37293,48259,50518,60155,71106,73180,76089,79188,80648,83560,86555,87056,92709,94592,
#Partially deleted in new
chr2	165294043	165392051	chr2:165294043-165392051	0	+	165294043	165294043	8553170	25	92,318,119,90,129,92,273,64,142,207,288,345,133,239,174,357,480,121,155,3222,282,54,606,271,3423,	0,1729,2973,13804,14622,15308,16279,17981,19576,19858,21427,29112,32808,37286,48252,50511,60148,71099,73173,76082,80641,83553,86548,92702,94585,
#Partially deleted in new
chr2	165294088	165392146	chr2:165294088-165392146	0	+	165295823	165328447	789624	28	47,318,119,90,129,92,273,64,142,207,288,345,133,135,239,174,357,480,121,155,174,123,282,54,138,105,271,3518,	0,1684,2928,13759,14577,15263,16234,17936,19531,19813,21382,29067,32763,34315,37241,48207,50466,60103,71054,73128,76037,79136,80596,83508,86503,87004,92657,94540,
#Partially deleted in new
chr2	165295772	165392308	chr2:165295772-165392308	1	+	165295823	165389824	0	26	318,119,90,129,92,273,64,142,207,288,345,133,239,174,357,480,121,155,174,123,282,54,138,105,271,3680,	0,1244,12075,12893,13392,14550,16252,17847,18129,19698,27383,31079,35557,46523,48782,58419,69370,71444,74353,77452,78912,81824,84819,85320,90973,92856,
#Deleted in new
chr2	165307920	165310745	chr2:165307920-165310745	0	+	165307920	165310621	789624	4	17,129,92,423,	0,745,1431,2402,
#Partially deleted in new
chr2	165469646	165689407	chr2:165469646-165689407	3	+	165595065	165679753	789624	7	94,170,89,171,260,297,10707,	0,25112,48226,125396,188114,206665,209054,
#Partially deleted in new
chr2	165469646	165679307	chr2:165469646-165679307	0	+	165595065	165679307	789624	7	94,170,89,171,260,297,607,	0,25112,48226,125396,188114,206665,209054,
#Partially deleted in new
chr2	165469697	165676319	chr2:165469697-165676319	0	+	165595065	165676319	789624	4	43,171,260,8,	0,125345,188063,206614,
#Partially deleted in new
chr2	165469705	165566981	chr2:165469705-165566981	0	+	165469705	165469705	8553170	4	35,170,89,205,	0,25053,48167,97071,
#Partially deleted in new
chr2	165572338	165689407	chr2:165572338-165689407	1	+	165595065	165679753	789624	5	249,171,260,297,10707,	0,22704,85422,103973,106362,
#Partially deleted in new
chr2	165574108	165680194	chr2:165574108-165680194	1	+	165574358	165679753	789624	5	323,171,260,297,1494,	0,20934,83652,102203,104592,
#Partially deleted in new
chr2	165747590	165794682	chr2:165747590-165794682	3	-	165748780	165770700	789624	11	1313,153,102,132,201,118,235,150,173,623,668,	0,2151,7036,7341,9456,11156,11745,14314,17293,22595,46424,
#Partially deleted in new
chr2	165747802	165761907	chr2:165747802-165761907	1	-	165748780	165761894	789624	8	1101,153,102,132,201,118,235,65,	0,1939,6824,7129,9244,10944,11533,14040,
#Partially deleted in new
chr2	165757046	165794659	chr2:165757046-165794659	0	-	165757046	165770700	789624	8	201,118,235,150,173,623,119,335,	0,1700,2289,4858,7837,13139,14218,37278,
#Partially deleted in new
chr2	165757067	165764959	chr2:165757067-165764959	0	-	165759566	165764959	789624	6	180,118,235,40,150,76,	0,1679,2268,4685,4837,7816,
#Partially deleted in new
chr2	165758617	165762025	chr2:165758617-165762025	0	-	165758617	165758617	8553170	3	247,235,121,	0,718,3287,
#Partially deleted in new
chr2	165770430	165794650	chr2:165770430-165794650	0	-	165770430	165770700	789624	2	378,162,	0,24058,
#Partially deleted in new
chr2	165770528	165793879	chr2:165770528-165793879	0	-	165770528	165770700	789624	3	280,119,160,	0,736,23191,
#Partially deleted in new
chr2	165770624	165794247	chr2:165770624-165794247	0	-	165770624	165770700	789624	3	184,119,233,	0,640,23390,
#Deleted in new
chr2	165770665	165771691	chr2:165770665-165771691	0	-	165770665	165770700	789624	2	143,427,	0,599,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	165794850	165810010	chr2:165794850-165810010	3	+	165794850	165794850	8553170	3	229,402,148,	0,6330,15012,
#Partially deleted in new
chr2	165794856	165846091	chr2:165794856-165846091	3	-	165794856	165794856	8553170	2	233,139,	0,51096,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	165833047	165839098	chr2:165833047-165839098	3	-	165833047	165833047	8553170	3	168,95,243,	0,3936,5808,
#Partially deleted in new
chr2	165857474	165871211	chr2:165857474-165871211	0	-	165857474	165857474	8553170	3	140,190,415,	0,740,13322,
#Partially deleted in new
chr2	165857474	165870991	chr2:165857474-165870991	0	-	165857474	165857474	789624	4	140,190,122,195,	0,740,5469,13322,
#Partially deleted in new
chr2	165857477	165890641	chr2:165857477-165890641	0	-	165874754	165890641	789624	10	137,190,94,224,154,68,121,225,196,163,	0,737,7506,13319,17201,18687,23201,26316,30801,33001,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr2	165873361	165953843	chr2:165873361-165953843	3	-	165874754	165953705	789624	29	1471,68,121,225,196,162,151,82,111,189,107,139,111,73,239,225,158,130,201,98,193,99,85,158,123,167,111,130,159,	0,2803,7317,10432,14917,17117,17476,25324,26408,28360,34316,37965,39152,40212,41839,43895,45914,51187,55773,56288,56810,58396,59611,67665,69857,72162,76032,76233,80323,
#Partially deleted in new
chr2	165879633	165883955	chr2:165879633-165883955	0	-	165879633	165879633	8553170	3	334,121,162,	0,1045,4160,
#Partially deleted in new
chr2	165898626	165907720	chr2:165898626-165907720	0	-	165898626	165898626	8553170	4	141,111,189,43,	0,1143,3095,9051,
#Partially deleted in new
chr2	165928716	165953745	chr2:165928716-165953745	0	-	165928716	165928716	8553170	11	619,98,193,99,85,158,123,167,111,130,61,	0,933,1455,3041,4256,12310,14502,16807,20677,20878,24968,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	165933856	165949891	chr2:165933856-165949891	3	+	165933856	165933856	789624	4	220,145,38,1857,	0,13340,14031,14178,
#Partially deleted in new
chr2	165933887	165947583	chr2:165933887-165947583	0	+	165933887	165933887	8553170	2	189,387,	0,13309,
#Partially deleted in new
chr2	165933890	165948153	chr2:165933890-165948153	1	+	165933890	165933890	789624	5	186,56,145,38,119,	0,843,13306,13997,14144,
#Partially deleted in new
chr2	165949110	165953811	chr2:165949110-165953811	0	-	165949110	165949110	8553170	3	394,130,127,	0,484,4574,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	165957554	166171521	chr2:165957554-166171521	0	+	165957554	165957554	8553170	6	38,117,113,111,102,135,	0,58058,69562,134998,146692,213832,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr2	165984640	166149135	chr2:165984640-166149135	1	-	165991244	166073621	789624	28	7782,271,105,138,54,282,123,174,155,121,483,357,174,239,133,348,282,207,142,64,270,92,129,90,119,313,138,89,	0,9505,11372,13397,15082,17831,25078,27468,29103,30966,51407,53135,54782,56590,57651,59061,60402,62129,62986,64245,67078,68211,69997,71770,73929,88717,93069,164406,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr2	165984640	166149151	chr2:165984640-166149151	3	-	165991244	166073621	789624	26	7782,271,105,138,54,123,174,155,121,483,357,174,239,133,381,285,207,142,64,270,92,129,90,119,313,105,	0,9505,11372,13397,15082,25078,27468,29103,30966,51407,53135,54782,56590,57651,59028,60402,62129,62986,64245,67078,68211,69997,71770,73929,88717,164406,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr2	165984640	166127986	chr2:165984640-166127986	0	-	166056437	166073621	789624	27	7782,271,105,138,54,282,123,174,155,121,483,357,174,239,133,381,285,207,142,64,270,92,129,94,119,313,216,	0,9505,11372,13397,15082,17831,25078,27468,29103,30966,51407,53135,54782,56590,57651,59028,60402,62129,62986,64245,67078,68211,69997,71770,73929,88717,143130,
#Partially deleted in new
chr2	165989159	166073697	chr2:165989159-166073697	1	-	165991244	166073621	789624	26	3263,271,105,138,54,282,123,174,155,121,483,357,174,239,133,381,285,207,142,64,270,92,129,88,121,340,	0,4986,6853,8878,10563,13312,20559,22949,24584,26447,46888,48616,50263,52071,53132,54509,55883,57610,58467,59726,62559,63692,65478,67251,69408,84198,
#Partially deleted in new
chr2	165989159	166149214	chr2:165989159-166149214	1	-	165991244	166073621	789624	27	3263,271,105,138,54,282,123,174,155,121,483,357,174,239,133,348,285,207,142,64,270,92,129,90,119,313,168,	0,4986,6853,8878,10563,13312,20559,22949,24584,26447,46888,48616,50263,52071,53132,54542,55883,57610,58467,59726,62559,63692,65478,67251,69410,84198,159887,
#Partially deleted in new
chr2	165989159	166128023	chr2:165989159-166128023	1	-	165994107	166073621	789624	26	5257,105,138,54,282,123,174,155,121,483,357,174,239,133,348,285,207,142,64,270,92,129,90,119,313,253,	0,6853,8878,10563,13312,20559,22949,24584,26447,46888,48616,50263,52071,53132,54542,55883,57610,58467,59726,62559,63692,65478,67251,69410,84198,138611,
#Partially deleted in new
chr2	165989159	166073670	chr2:165989159-166073670	1	-	165991244	166073621	789624	26	3263,271,105,138,54,282,123,174,155,121,483,357,174,239,133,348,285,207,142,64,270,92,129,90,119,313,	0,4986,6853,8878,10563,13312,20559,22949,24584,26447,46888,48616,50263,52071,53132,54542,55883,57610,58467,59726,62559,63879,65478,67251,69410,84198,
#Partially deleted in new
chr2	165989162	166073639	chr2:165989162-166073639	1	-	165991244	166073621	789624	26	3260,271,105,138,54,282,123,174,155,121,483,357,174,239,133,348,285,207,142,64,270,92,129,90,119,282,	0,4983,6850,8875,10560,13309,20556,22946,24581,26444,46885,48613,50260,52068,53129,54539,55880,57607,58464,59723,62556,63689,65475,67248,69407,84195,
#Partially deleted in new
chr2	165989868	166036274	chr2:165989868-166036274	0	-	166002622	166036274	789624	12	2554,271,105,138,54,282,64,123,174,155,121,227,	0,4277,6144,8169,9854,12603,17361,19850,22240,23875,25738,46179,
#Partially deleted in new
chr2	165991244	166073621	chr2:165991244-166073621	1	-	165991244	166073621	789624	26	1178,271,105,138,54,282,123,174,155,121,483,357,174,239,133,297,285,207,142,64,270,92,129,90,119,264,	0,2901,4768,6793,8478,11227,18474,20864,22499,24362,44803,46531,48178,49986,51047,52508,53798,55525,56382,57641,60474,61607,63393,65166,67325,82113,
#Deleted in new
chr2	165994166	165996322	chr2:165994166-165996322	0	-	165994166	165994166	8553170	2	250,310,	0,1846,
#Deleted in new
chr2	165996052	166000063	chr2:165996052-166000063	0	-	165996052	165996052	8553170	3	65,138,341,	0,1985,3670,
#Partially deleted in new
chr2	165998124	166002908	chr2:165998124-166002908	0	-	165998124	165998124	8553170	3	51,54,437,	0,1598,4347,
#Partially deleted in new
chr2	165998142	166002486	chr2:165998142-166002486	0	-	165999092	166002486	789624	4	33,66,54,15,	0,908,1580,4329,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	166015679	166060458	chr2:166015679-166060458	1	+	166015679	166015679	8553170	4	50,65,122,330,	0,20386,43723,44449,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	166015721	166171516	chr2:166015721-166171516	0	+	166015721	166015721	8553170	7	929,113,58,65,114,111,130,	0,11395,59566,61366,65843,76831,155665,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	166016607	166171521	chr2:166016607-166171521	0	+	166016607	166016607	8553170	9	43,113,65,58,65,114,111,102,135,	0,10509,19458,58680,60480,64957,75945,87639,154779,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	166027140	166171521	chr2:166027140-166171521	0	+	166027140	166027140	8553170	7	89,65,58,65,114,111,135,	0,8925,48147,49947,54424,65412,144246,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr2	166037775	166128015	chr2:166037775-166128015	0	-	166060693	166073621	789624	18	357,174,239,133,381,285,207,142,64,270,92,129,90,119,228,313,138,245,	0,1647,3455,4516,5893,7267,8994,9851,11110,13943,15076,16862,18635,20794,22864,35582,39934,89995,
#Partially deleted in new
chr2	166073610	166127054	chr2:166073610-166127054	0	-	166073610	166073621	8553170	2	60,73,	0,53371,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	166081530	166301784	chr2:166081530-166301784	3	+	166081530	166081530	789624	12	148,111,172,180,82,42,134,160,163,107,152,854,	0,11022,89856,118108,166664,167812,170248,195557,213034,214492,217159,219400,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	166123493	166123597	chr2:166123493-166123597	3	-	166123493	166123493	8553170	1	104,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	166126358	166171521	chr2:166126358-166171521	0	+	166126358	166126358	8553170	3	122,93,135,	0,11184,45028,
#Partially deleted in new
chr2	166126358	166171521	chr2:166126358-166171521	0	+	166126358	166126358	8553170	2	122,135,	0,45028,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	166126369	166171521	chr2:166126369-166171521	0	+	166126369	166126369	8553170	4	111,87,93,135,	0,7452,11173,45017,
#Partially deleted in new
chr2	166149180	166294588	chr2:166149180-166294588	1	+	166149180	166149180	8553170	8	392,172,180,82,42,79,160,24,	0,22206,50458,99014,100162,102653,127907,145384,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	166180651	166180966	chr2:166180651-166180966	3	-	166180651	166180651	8553170	1	315,	0,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr2	166195184	166375993	chr2:166195184-166375993	3	-	166198671	166311756	0	27	4680,271,105,138,54,282,123,174,155,121,477,357,174,239,130,339,288,207,142,64,213,92,129,90,119,308,297,	0,8770,9175,31382,32485,33506,38155,42909,47317,56580,77214,81798,82955,85172,86494,89301,91151,93252,98046,99414,107905,109053,110607,111325,111771,116314,180512,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr2	166195188	166375901	chr2:166195188-166375901	1	-	166198671	166311756	0	27	4676,271,105,138,54,282,123,174,155,121,477,357,174,239,130,372,288,207,142,64,213,92,129,90,119,308,198,	0,8766,9171,31378,32481,33502,38151,42905,47313,56576,77210,81794,82951,85168,86490,89264,91147,93248,98042,99410,107901,109049,110603,111321,111767,116310,180515,
#Partially deleted in new
chr2	166197461	166375901	chr2:166197461-166375901	1	-	166198671	166311756	0	27	2403,271,105,138,54,282,123,174,155,121,477,357,174,239,130,339,288,207,142,64,213,92,129,90,119,308,198,	0,6493,6898,29105,30208,31229,35878,40632,45040,54303,74937,79521,80678,82895,84217,87024,88874,90975,95769,97137,105628,106569,108330,109048,109494,114037,178242,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	166198298	166205239	chr2:166198298-166205239	0	-	166198298	166198298	8553170	3	1566,271,880,	0,5656,6061,
#Partially deleted in new
chr2	166198410	166311756	chr2:166198410-166311756	1	-	166198671	166311756	789624	25	1454,271,105,138,54,282,174,155,121,477,357,174,239,130,339,288,207,142,64,213,92,129,90,119,258,	0,5544,5949,28156,29259,30280,39683,44091,53354,73988,78572,79729,81946,83268,86075,87925,90026,94820,96188,104679,105620,107381,108099,108545,113088,
#Partially deleted in new
chr2	166198610	166375914	chr2:166198610-166375914	1	-	166198671	166311756	0	27	1254,271,105,138,54,282,123,174,155,121,477,357,174,239,130,372,288,207,142,64,213,92,129,90,119,308,218,	0,5344,5749,27956,29059,30080,34729,39483,43891,53154,73788,78372,79529,81746,83068,85842,87725,89826,94620,95988,104479,105627,107181,107899,108345,112888,177086,
#Partially deleted in new
chr2	166198671	166311756	chr2:166198671-166311756	1	-	166198671	166311756	0	26	1193,271,105,138,54,282,123,174,155,121,477,357,174,239,130,372,288,207,142,64,213,92,129,90,119,258,	0,5283,5688,27895,28998,30019,34668,39422,43830,53093,73727,78311,79468,81685,83007,85781,87664,89765,94559,95927,104418,105359,107120,107838,108284,112827,
#Partially deleted in new
chr2	166242623	166272749	chr2:166242623-166272749	0	-	166259281	166272749	789624	4	33,121,82,351,	0,9141,16582,29775,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	166276416	166278313	chr2:166276416-166278313	0	-	166276928	166278313	789624	2	923,174,	0,1723,
#Partially deleted in new
chr2	166277715	166375969	chr2:166277715-166375969	1	-	166278124	166311756	789624	15	598,239,130,339,288,207,142,64,213,92,129,90,119,308,273,	0,2641,3963,6770,8620,10721,15515,16883,25374,26522,28076,28794,29240,33783,97981,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	166301173	166304089	chr2:166301173-166304089	0	-	166301173	166301173	8553170	2	2129,59,	0,2857,
#Partially deleted in new
chr2	166302062	166376001	chr2:166302062-166376001	0	-	166302062	166302062	8553170	7	1240,92,129,90,119,308,305,	0,2175,3729,4447,4893,9436,73634,
#Partially deleted in new
chr2	166403572	166494214	chr2:166403572-166494214	1	-	166405579	166477696	789624	26	3074,271,105,138,54,279,108,174,155,106,435,357,174,239,97,207,142,70,207,92,129,90,119,248,113,247,	0,6092,6647,8957,9495,13134,17617,19686,24215,25596,28745,37823,39930,41189,44039,53297,58816,61889,62208,67042,68744,70226,70653,73890,83283,90395,
#Partially deleted in new
chr2	166403572	166486971	chr2:166403572-166486971	1	-	166405579	166477696	789624	26	3074,271,105,138,54,279,108,174,155,106,435,357,174,239,97,207,142,70,207,92,129,89,1,119,248,116,	0,6092,6647,8957,9495,13134,17617,19686,24215,25596,28745,37823,39930,41189,44039,53297,58816,61889,62208,67042,68744,70226,70319,70653,73890,83283,
#Partially deleted in new
chr2	166403572	166486971	chr2:166403572-166486971	1	-	166405579	166477696	789624	25	3074,271,105,138,54,279,108,174,155,106,435,357,174,239,97,207,142,70,207,92,129,89,120,248,116,	0,6092,6647,8957,9495,13134,17617,19686,24215,25596,28745,37823,39930,41189,44039,53297,58816,61889,62208,67042,68744,70226,70652,73890,83283,
#Partially deleted in new
chr2	166403572	166494249	chr2:166403572-166494249	3	-	166405579	166477696	789624	26	3074,271,105,138,54,279,108,174,155,106,435,357,174,239,97,207,142,70,207,92,129,90,119,248,113,282,	0,6092,6647,8957,9495,13134,17617,19686,24215,25596,28745,37823,39930,41189,44039,53297,58816,61889,62208,67042,68744,70226,70653,73890,83283,90395,
#Partially deleted in new
chr2	166404942	166494232	chr2:166404942-166494232	1	-	166405579	166477696	789624	25	1704,271,105,138,54,279,108,174,155,106,435,357,174,239,97,207,142,70,207,92,129,90,119,248,265,	0,4722,5277,7587,8125,11764,16247,18316,22845,24226,27375,36453,38560,39819,42669,51927,57446,60519,60838,65672,67374,68856,69283,72520,89025,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr2	166405512	166486968	chr2:166405512-166486968	0	-	166432714	166477696	789624	26	1134,271,105,138,54,279,108,174,155,106,435,94,357,174,239,97,207,142,70,207,92,129,90,119,248,113,	0,4152,4707,7017,7555,11194,15677,17746,22275,23656,26805,30834,35883,37990,39249,42099,51357,56876,59949,60268,65102,66804,68286,68713,71950,81343,
#Partially deleted in new
chr2	166414488	166414729	chr2:166414488-166414729	7	+	166414488	166414488	16724991	1	241,	0,
#Duplicated in new
chr2	166440582	166494326	chr2:166440582-166494326	1	-	166441320	166477696	789624	15	1170,174,239,97,207,142,70,207,92,129,90,119,248,113,359,	0,2920,4179,7029,16287,21806,24879,25198,30032,31734,33216,33643,36880,46273,53385,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	166461754	166465526	chr2:166461754-166465526	0	-	166461754	166461754	8553170	2	776,65,	0,3707,
#Partially deleted in new
chr2	166888486	167259749	chr2:166888486-167259749	1	+	166903482	167259363	0	10	71,426,154,161,135,111,73,134,134,1893,	0,14978,247422,322248,329679,351368,352177,353290,365545,369370,
#Partially deleted in new
chr2	166888486	167259753	chr2:166888486-167259753	1	+	166903482	167254126	0	11	71,426,154,161,135,111,73,134,9379,134,1897,	0,14978,247422,322248,329679,351368,352177,353290,354082,365545,369370,
#Partially deleted in new
chr2	166888486	167259749	chr2:166888486-167259749	3	+	166903482	167259363	0	11	71,426,154,99,161,135,111,73,134,134,1893,	0,14978,247422,296055,322248,329679,351368,352177,353290,365545,369370,
#Deleted in new
chr2	166889501	166889884	chr2:166889501-166889884	7	-	166889501	166889501	16724991	1	383,	0,
#Partially deleted in new
chr2	167123903	167140955	chr2:167123903-167140955	3	-	167123903	167123903	789624	2	622,154,	0,16898,
#Partially deleted in new
chr2	167135900	167259749	chr2:167135900-167259749	1	+	167136025	167254126	0	9	162,161,135,111,73,134,9379,134,1893,	0,74834,82265,103954,104763,105876,106668,118131,121956,
#Partially deleted in new
chr2	167187282	167259749	chr2:167187282-167259749	1	+	167210838	167254126	0	9	249,161,135,111,73,134,9379,134,1893,	0,23452,30883,52572,53381,54494,55286,66749,70574,
#Partially deleted in new
chr2	167187282	167259749	chr2:167187282-167259749	1	+	167210838	167259363	0	8	249,161,135,111,73,134,134,1893,	0,23452,30883,52572,53381,54494,66749,70574,
#Partially deleted in new
chr2	167248681	167259749	chr2:167248681-167259749	1	+	167249150	167254126	789624	4	373,2846,134,1893,	0,420,5350,9175,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	167293170	167558333	chr2:167293170-167558333	3	+	167293170	167293170	8553170	3	164,101,197,	0,197006,264966,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	167631479	167631541	chr2:167631479-167631541	3	-	167631479	167631479	8553170	1	62,	0,
#Deleted in new
chr2	167713662	167716065	chr2:167713662-167716065	7	-	167713662	167713662	16724991	1	2403,	0,
#Partially deleted in new
chr2	167814773	167869914	chr2:167814773-167869914	1	-	167814773	167814773	8553170	2	458,175,	0,54966,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	167815052	167941144	chr2:167815052-167941144	3	-	167815052	167815052	789624	5	179,136,241,51,36,	0,47662,54687,85679,126056,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	167868947	167874041	chr2:167868947-167874041	3	+	167869039	167870020	789624	1	5094,	0,
#Partially deleted in new
chr2	167954019	168248141	chr2:167954019-168248141	3	-	167955495	168247435	789624	18	1551,65,69,53,71,63,30,123,66,49,134,102,110,56,142,109,113,914,	0,10642,58614,63023,109480,111299,120962,121089,175521,175690,184068,186269,186629,207767,209719,213279,227958,293208,
#Partially deleted in new
chr2	167954019	168113106	chr2:167954019-168113106	0	-	167954019	167954019	8553170	9	1551,65,69,53,71,63,30,123,189,	0,10642,58614,63023,109480,111299,120962,121089,158898,
#Partially deleted in new
chr2	167964307	168012661	chr2:167964307-168012661	0	-	167964307	167964307	8553170	3	238,65,28,	0,354,48326,
#Deleted in new
chr2	168231920	168232220	chr2:168231920-168232220	7	-	168231920	168231920	16724991	1	300,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	168451323	168451606	chr2:168451323-168451606	3	+	168451323	168451323	8553170	1	283,	0,
#Partially deleted in new
chr2	168455861	168775137	chr2:168455861-168775137	3	+	168456448	168769662	789624	10	757,106,131,58,51,93,129,107,157,5628,	0,91734,105330,175123,235172,239097,259139,262010,309730,313648,
#Partially deleted in new
chr2	168456248	168775134	chr2:168456248-168775134	1	+	168456448	168769662	789624	11	370,106,131,58,51,93,129,107,157,24,5625,	0,91347,104943,174736,234785,238710,258752,261623,309343,310073,313261,
#Deleted in new
chr2	168582942	168583018	chr2:168582942-168583018	3	+	168582942	168582942	5263520	1	76,	0,
#Partially deleted in new
chr2	168606389	168606496	chr2:168606389-168606496	3	-	168606389	168606389	8553170	1	107,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	168774354	168786397	chr2:168774354-168786397	0	-	168774354	168774354	8553170	6	284,131,79,142,93,41,	0,466,8657,8879,9600,12002,
#Partially deleted in new
chr2	168774354	168784694	chr2:168774354-168784694	0	-	168774354	168774354	8553170	3	284,131,126,	0,466,10214,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	168783138	168786429	chr2:168783138-168786429	1	-	168783138	168783138	8553170	3	333,93,73,	0,816,3218,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr2	168786538	168865055	chr2:168786538-168865055	1	+	168802646	168864970	0	21	98,188,68,138,293,86,84,63,82,63,99,126,171,99,126,109,89,126,115,90,222,	0,1322,11616,14527,15842,25028,38095,41619,41881,44933,47688,56453,64297,64545,64740,68813,70151,72973,74256,75421,78295,
#Partially deleted in new
chr2	168798150	168865339	chr2:168798150-168865339	1	+	168802646	168864970	0	19	72,138,293,86,84,63,82,63,99,126,171,99,126,109,89,126,115,90,506,	0,2915,4230,13416,26483,30007,30269,33321,36076,44841,52685,52933,53128,57201,58539,61361,62644,63809,66683,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	168802417	168865514	chr2:168802417-168865514	3	+	168802646	168864970	0	16	256,86,84,63,82,63,99,126,99,126,109,89,126,115,90,681,	0,9149,22216,25740,26002,29054,31809,40574,48666,48861,52934,54272,57094,58377,59542,62416,
#Partially deleted in new
chr2	168802591	168831533	chr2:168802591-168831533	0	+	168802646	168824689	789624	7	82,86,125,84,63,82,62,	0,8975,15580,22042,25566,25828,28880,
#Partially deleted in new
chr2	168802596	168865054	chr2:168802596-168865054	1	+	168828194	168864970	0	15	77,84,63,82,63,99,126,99,126,109,89,126,115,90,221,	0,22037,25561,25823,28875,31630,40395,48487,48682,52755,54093,56915,58198,59363,62237,
#Partially deleted in new
chr2	168802635	168864970	chr2:168802635-168864970	1	+	168828194	168864970	0	15	38,84,63,82,63,99,126,99,126,109,89,126,115,90,137,	0,21998,25522,25784,28836,31591,40356,48448,48643,52716,54054,56876,58159,59324,62198,
#Partially deleted in new
chr2	168802638	168812084	chr2:168802638-168812084	0	+	168802638	168802638	8553170	2	35,518,	0,8928,
#Partially deleted in new
chr2	168802646	168864970	chr2:168802646-168864970	1	+	168802646	168864970	0	15	27,86,63,82,63,99,126,99,126,109,89,126,115,90,137,	0,8920,25511,25773,28825,31580,40345,48437,48632,52705,54043,56865,58148,59313,62187,
#Partially deleted in new
chr2	168811333	168851182	chr2:168811333-168851182	0	+	168828194	168851182	789624	9	92,86,84,63,82,63,99,126,99,	0,233,13300,16824,17086,20138,22893,31658,39750,
#Partially deleted in new
chr2	168834131	168889293	chr2:168834131-168889293	0	-	168834131	168834131	8553170	5	91,99,105,147,68,	0,39453,41940,43106,55094,
#Partially deleted in new
chr2	168843051	168855654	chr2:168843051-168855654	0	+	168843051	168843051	8553170	4	66,99,126,303,	0,8032,8227,12300,
#Partially deleted in new
chr2	168855421	168859533	chr2:168855421-168859533	0	+	168855421	168855908	789624	4	39,325,89,22,	0,464,1268,4090,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	168855685	168865054	chr2:168855685-168865054	0	+	168855685	168855685	8553170	5	1093,126,115,90,221,	0,3826,5109,6274,9148,
#Partially deleted in new
chr2	168859108	168860838	chr2:168859108-168860838	0	+	168859108	168859108	8553170	2	529,44,	0,1686,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	168870893	168890445	chr2:168870893-168890445	3	-	168871430	168889519	0	7	662,99,105,147,66,147,128,	0,2691,5178,6344,18332,18493,19424,
#Partially deleted in new
chr2	168877237	168913277	chr2:168877237-168913277	0	-	168877237	168889519	789624	5	147,66,147,158,78,	0,11988,12149,13291,35962,
#Partially deleted in new
chr2	168877237	168913371	chr2:168877237-168913371	0	-	168877237	168877237	8553170	6	147,60,66,147,158,176,	0,7610,11988,12149,13291,35958,
#Partially deleted in new
chr2	168901239	168908133	chr2:168901239-168908133	3	+	168901331	168908079	789624	5	310,110,112,116,566,	0,1205,3265,5424,6328,
#Partially deleted in new
chr2	168901290	168907731	chr2:168901290-168907731	1	+	168901331	168907592	789624	4	259,110,112,164,	0,1154,3214,6277,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	168901292	168910000	chr2:168901292-168910000	0	+	168901331	168904595	789624	4	257,112,116,2433,	0,3212,5371,6275,
#Partially deleted in new
chr2	168901324	168907836	chr2:168901324-168907836	1	+	168901331	168907592	789624	2	225,269,	0,6243,
#Partially deleted in new
chr2	168902948	168908695	chr2:168902948-168908695	0	+	168902948	168902948	8553170	3	44,112,1128,	0,1556,4619,
#Partially deleted in new
chr2	168915497	168927234	chr2:168915497-168927234	0	-	168915604	168927234	8553170	3	185,147,79,	0,9159,11658,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr2	168920780	169031323	chr2:168920780-169031323	1	-	168923621	169018125	789624	28	3042,147,207,198,157,242,204,162,105,165,103,64,202,171,204,126,111,114,175,125,172,134,88,239,52,22,103,99,	0,3876,6375,9884,11596,14403,15449,23824,24076,37183,43425,47646,48569,49264,51066,52934,55796,59085,65329,70020,72930,74568,75854,92491,93522,95997,97269,110444,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr2	168920780	169031324	chr2:168920780-169031324	3	-	168923621	169018125	8553170	28	3042,147,207,198,157,242,204,162,105,165,103,64,202,171,204,126,111,114,175,125,172,134,88,239,52,22,103,100,	0,3876,6375,9884,11596,14403,15449,23824,24076,37183,43425,47646,48569,49264,51066,52934,55796,59085,65329,70020,72930,74568,75854,92491,93522,95997,97269,110444,
#Partially deleted in new
chr2	168922981	168970170	chr2:168922981-168970170	0	-	168923621	168970170	8553170	15	841,147,207,60,198,157,242,204,162,105,165,103,64,202,126,	0,1675,4174,6310,7683,9395,12202,13248,21623,21875,34982,41224,45445,46368,47063,
#Partially deleted in new
chr2	168923382	168972032	chr2:168923382-168972032	0	-	168970323	168972032	789624	15	440,147,135,198,157,242,204,162,105,165,103,64,202,312,186,	0,1274,3773,7282,8994,11801,12847,21222,21474,34581,40823,45044,45967,46662,48464,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	168932464	168935406	chr2:168932464-168935406	0	-	168932918	168935406	8553170	3	69,160,223,	0,316,2719,
#Deleted in new
chr2	168969522	168970591	chr2:168969522-168970591	0	-	168969522	168969522	8553170	2	29,547,	0,522,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	169064788	169096167	chr2:169064788-169096167	3	+	169081581	169095767	789624	8	311,302,720,111,372,259,164,624,	0,1629,5341,7786,16734,18540,27001,30755,
#Partially deleted in new
chr2	169067034	169096167	chr2:169067034-169096167	1	+	169081581	169095767	789624	6	233,265,372,259,164,624,	0,2418,14488,16294,24755,28509,
#Partially deleted in new
chr2	169067034	169096167	chr2:169067034-169096167	1	+	169067146	169095767	789624	5	233,372,259,164,624,	0,14488,16294,24755,28509,
#Partially deleted in new
chr2	169069555	169096162	chr2:169069555-169096162	1	+	169081581	169095767	789624	6	162,102,372,259,164,619,	0,11495,11967,13773,22234,25988,
#Partially deleted in new
chr2	169069561	169081779	chr2:169069561-169081779	0	+	169081581	169081779	789624	3	156,111,257,	0,3013,11961,
#Partially deleted in new
chr2	169069575	169095767	chr2:169069575-169095767	1	+	169083456	169095767	789624	5	142,255,259,164,224,	0,12064,13753,22214,25968,
#Partially deleted in new
chr2	169072499	169096167	chr2:169072499-169096167	1	+	169081581	169095767	789624	6	186,212,372,259,164,624,	0,1755,9023,10829,19290,23044,
#Partially deleted in new
chr2	169081106	169096167	chr2:169081106-169096167	1	+	169081581	169095767	789624	5	46,372,259,164,624,	0,416,2222,10683,14437,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	169100742	169101210	chr2:169100742-169101210	3	+	169100742	169100742	8553170	2	162,145,	0,323,
#Deleted in new
chr2	169115194	169115680	chr2:169115194-169115680	7	+	169115194	169115194	16724991	2	341,81,	0,405,
#Boundary problem: need 79, got 0, diff 79, mapped 0.0
chr2	169127108	169362685	chr2:169127108-169362685	3	-	169128662	169362399	0	79	1722,72,108,102,130,121,68,91,120,177,221,129,166,144,132,132,129,123,138,117,117,120,129,246,197,178,224,171,153,517,296,202,132,120,126,243,204,290,159,166,921,189,240,214,178,110,144,167,129,178,229,185,212,249,378,117,120,240,282,138,131,126,193,204,141,203,207,224,170,129,120,153,117,114,111,117,123,108,365,	0,1904,5465,10283,11468,12142,12434,13346,15565,18638,19630,23789,25690,27351,29165,30262,35363,38823,41430,42593,43442,44906,45987,46810,48084,49302,50694,54339,55058,58394,60861,64723,66652,69802,71677,74519,75647,76873,78370,78914,79221,82344,84859,86548,89144,93345,98201,99313,104605,106302,108731,109994,110982,112418,113879,115847,116294,117584,119596,120269,128997,130015,131916,143795,145818,147927,150636,152263,153241,155764,161917,163736,165144,167039,167491,180172,191653,193668,235212,
#Boundary problem: need 79, got 0, diff 79, mapped 0.0
chr2	169127108	169362534	chr2:169127108-169362534	1	-	169128662	169362399	8553170	79	1722,72,108,102,130,121,68,91,120,177,221,129,166,144,132,132,129,123,138,117,117,120,129,246,197,178,224,171,153,517,296,202,132,120,126,243,204,290,159,166,921,189,240,214,178,110,144,167,129,178,229,185,212,249,378,117,120,240,282,138,131,126,193,204,141,203,207,224,170,129,120,153,117,114,111,117,123,108,214,	0,1904,5465,10283,11468,12142,12434,13346,15565,18638,19630,23789,25690,27351,29165,30262,35363,38823,41430,42593,43442,44906,45987,46810,48084,49302,50694,54339,55058,58394,60861,64723,66652,69802,71677,74519,75647,76873,78370,78914,79221,82344,84859,86548,89144,93345,98201,99313,104605,106302,108731,109994,110982,112418,113879,115847,116294,117584,119596,120269,128997,130015,131916,143795,145818,147927,150636,152263,153241,155764,161917,163736,165144,167039,167491,180172,191653,193668,235212,
#Partially deleted in new
chr2	169127828	169173964	chr2:169127828-169173964	0	-	169154465	169173964	8553170	24	1002,72,108,102,130,121,68,54,120,177,221,129,166,140,132,132,129,123,138,117,117,120,129,46,	0,1184,4745,9563,10748,11422,11714,12626,14845,17918,18910,23069,24970,26631,28445,29542,34643,38103,40710,41873,42722,44186,45267,46090,
#Partially deleted in new
chr2	169128435	169188197	chr2:169128435-169188197	0	-	169139362	169188197	8553170	30	395,72,108,102,130,121,68,120,177,221,129,166,144,132,132,129,123,138,117,117,120,129,246,197,178,224,171,153,517,228,	0,577,4138,8956,10141,10815,11107,14238,17311,18303,22462,24363,26024,27838,28935,34036,37496,40103,41266,42115,43579,44660,45483,46757,47975,49367,53012,53731,57067,59534,
#Partially deleted in new
chr2	169132599	169139663	chr2:169132599-169139663	0	-	169132599	169132599	8553170	5	82,102,130,121,121,	0,4792,5977,6651,6943,
#Partially deleted in new
chr2	169177839	169182450	chr2:169177839-169182450	0	-	169177839	169177839	8553170	4	187,171,153,46,	0,3608,4327,4565,
#Partially deleted in new
chr2	169240749	169362534	chr2:169240749-169362534	1	-	169240943	169362399	789624	23	616,117,120,240,282,138,131,126,193,141,203,224,170,129,120,153,117,114,111,117,123,108,214,	0,2206,2653,3943,5955,6628,15356,16374,18275,32177,34286,38622,39600,42123,48276,50095,51503,53398,53850,66531,78012,80027,121571,
#Partially deleted in new
chr2	169270999	169275353	chr2:169270999-169275353	0	-	169270999	169270999	8553170	3	108,141,318,	0,1927,4036,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	169479177	169506655	chr2:169479177-169506655	3	+	169479553	169504582	789624	12	435,83,66,50,128,136,96,63,135,84,24,2175,	0,3073,7891,8628,8809,13696,14563,18449,20308,23917,25125,25303,
#Partially deleted in new
chr2	169479479	169482710	chr2:169479479-169482710	0	+	169479479	169479479	8553170	2	133,460,	0,2771,
#Partially deleted in new
chr2	169479479	169525922	chr2:169479479-169525922	3	+	169479553	169525696	789624	16	133,83,66,50,128,136,96,63,135,84,24,158,108,186,147,338,	0,2771,7589,8326,8507,13394,14261,18147,20006,23615,24823,35094,35374,38710,41381,46105,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	169479482	169506655	chr2:169479482-169506655	1	+	169479553	169504582	789624	11	130,83,66,50,128,136,96,135,84,24,2175,	0,2768,7586,8323,8504,13391,14258,20003,23612,24820,24998,
#Partially deleted in new
chr2	169479501	169497655	chr2:169479501-169497655	0	+	169479553	169488006	789624	6	111,83,128,136,96,29,	0,2749,8485,13372,14239,18125,
#Partially deleted in new
chr2	169487761	169493086	chr2:169487761-169493086	0	+	169487761	169487761	8553170	2	353,213,	0,5112,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	169499033	169506490	chr2:169499033-169506490	0	+	169499033	169499033	8553170	4	587,84,24,2010,	0,4061,5269,5447,
#Partially deleted in new
chr2	169509701	169526262	chr2:169509701-169526262	3	+	169509778	169525696	789624	6	1187,158,108,186,147,678,	0,4872,5152,8488,11159,15883,
#Deleted in new
chr2	169514219	169514950	chr2:169514219-169514950	0	+	169514219	169514219	8553170	3	83,158,97,	0,354,634,
#Partially deleted in new
chr2	169514261	169521007	chr2:169514261-169521007	0	+	169514261	169514261	8553170	5	114,158,108,186,147,	0,312,592,3928,6599,
#Partially deleted in new
chr2	169529748	169573873	chr2:169529748-169573873	3	-	169529824	169572029	789624	15	178,115,139,114,129,129,115,487,132,111,399,126,69,519,205,	0,838,1603,7478,8264,10302,14972,16469,25375,27438,30638,33476,39435,41904,43920,
#Partially deleted in new
chr2	169529754	169573832	chr2:169529754-169573832	1	-	169529824	169572029	789624	14	172,115,139,114,129,115,487,132,111,399,126,69,519,164,	0,832,1597,7472,10296,14966,16463,25369,27432,30632,33470,39429,41898,43914,
#Partially deleted in new
chr2	169529754	169540117	chr2:169529754-169540117	0	-	169529754	169529754	8553170	4	172,115,139,67,	0,832,1597,10296,
#Partially deleted in new
chr2	169529792	169540124	chr2:169529792-169540124	0	-	169529792	169529792	8553170	5	134,115,139,129,74,	0,794,1559,8220,10258,
#Partially deleted in new
chr2	169529831	169531682	chr2:169529831-169531682	0	-	169529831	169529831	8553170	3	95,115,331,	0,755,1520,
#Partially deleted in new
chr2	169537001	169538141	chr2:169537001-169538141	0	-	169537001	169537001	8553170	2	339,129,	0,1011,
#Partially deleted in new
chr2	169560270	169563390	chr2:169560270-169563390	0	-	169560270	169560270	8553170	2	515,166,	0,2954,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	169560529	169571239	chr2:169560529-169571239	0	-	169560529	169563280	789624	4	256,126,69,236,	0,2695,8654,10474,
#Partially deleted in new
chr2	169560529	169573812	chr2:169560529-169573812	0	-	169560529	169572029	789624	4	256,126,519,144,	0,2695,11123,13139,
#Partially deleted in new
chr2	169560529	169573875	chr2:169560529-169573875	0	-	169560529	169572029	789624	5	256,126,69,519,880,	0,2695,8654,11123,12466,
#Deleted in new
chr2	169577370	169577746	chr2:169577370-169577746	7	-	169577370	169577370	16724991	1	376,	0,
#Partially deleted in new
chr2	169584339	169641406	chr2:169584339-169641406	3	+	169604041	169637523	0	14	151,53,77,75,108,45,88,30,140,214,168,88,137,4994,	0,19302,19686,19847,21699,22764,24331,30124,30245,46434,47426,48820,51752,52073,
#Partially deleted in new
chr2	169584343	169636741	chr2:169584343-169636741	0	+	169584366	169636741	789624	11	147,108,45,88,30,140,214,159,88,137,329,	0,21695,22760,24327,30120,30241,46430,47431,48816,51748,52069,
#Partially deleted in new
chr2	169584352	169637711	chr2:169584352-169637711	1	+	169604041	169637523	789624	13	138,53,77,75,108,88,30,140,214,168,88,137,1299,	0,19289,19673,19834,21686,24318,30111,30232,46421,47413,48807,51739,52060,
#Partially deleted in new
chr2	169584357	169630884	chr2:169584357-169630884	0	+	169584357	169584357	8553170	8	133,53,77,75,108,45,88,111,	0,19284,19668,19829,21681,22746,24313,46416,
#Partially deleted in new
chr2	169584386	169633566	chr2:169584386-169633566	1	+	169604041	169633304	0	12	111,53,77,75,108,45,88,30,140,214,168,407,	0,19255,19639,19800,21652,22717,24284,30077,30198,46387,47379,48773,
#Partially deleted in new
chr2	169584431	169637621	chr2:169584431-169637621	1	+	169604041	169637523	0	14	66,53,77,75,108,45,88,30,140,214,168,88,137,1209,	0,19210,19594,19755,21607,22672,24239,30032,30153,46342,47334,48728,51660,51981,
#Partially deleted in new
chr2	169584567	169606079	chr2:169584567-169606079	0	+	169604041	169606079	789624	4	332,77,75,41,	0,19458,19619,21471,
#Partially deleted in new
chr2	169584646	169630966	chr2:169584646-169630966	0	+	169604041	169630966	789624	10	253,53,77,75,108,45,88,30,140,193,	0,18995,19379,19540,21392,22457,24024,29817,29938,46127,
#Partially deleted in new
chr2	169604039	169630815	chr2:169604039-169630815	0	+	169604041	169614465	789624	8	63,75,44,45,88,30,140,42,	0,147,2063,3064,4631,10424,10545,26734,
#Partially deleted in new
chr2	169630849	169636814	chr2:169630849-169636814	0	+	169630849	169630849	8553170	6	138,49,168,88,137,402,	0,749,916,2310,5242,5563,
#Partially deleted in new
chr2	169631436	169636241	chr2:169631436-169636241	0	+	169631436	169631436	8553170	3	497,88,150,	0,1723,4655,
#Partially deleted in new
chr2	169645424	169694433	chr2:169645424-169694433	3	-	169645840	169694327	789624	9	758,165,193,140,157,194,174,227,173,	0,3757,4904,8650,16855,29151,29442,35582,48836,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	169658131	169661357	chr2:169658131-169661357	7	-	169658131	169658131	16724991	3	704,109,448,	0,1061,2778,
#Partially deleted in new
chr2	169662325	169694350	chr2:169662325-169694350	0	-	169662325	169675037	789624	4	111,194,174,90,	0,12250,12541,31935,
#Partially deleted in new
chr2	169674936	169681324	chr2:169674936-169681324	0	-	169674936	169681316	789624	3	104,175,55,	0,6070,6333,
#Partially deleted in new
chr2	169694453	169701706	chr2:169694453-169701706	1	+	169700971	169701697	789624	5	169,33,171,118,761,	0,761,2907,3411,6492,
#Partially deleted in new
chr2	169694453	169701706	chr2:169694453-169701706	1	+	169700971	169701697	789624	4	288,33,171,761,	0,761,2907,6492,
#Partially deleted in new
chr2	169694453	169701706	chr2:169694453-169701706	3	+	169700971	169701697	789624	4	169,33,90,761,	0,761,3439,6492,
#Partially deleted in new
chr2	169694464	169701708	chr2:169694464-169701708	1	+	169700971	169701697	789624	4	158,33,171,763,	0,750,2896,6481,
#Partially deleted in new
chr2	169694470	169701378	chr2:169694470-169701378	0	+	169700971	169701378	789624	4	271,33,171,433,	0,744,2890,6475,
#Partially deleted in new
chr2	169694470	169701138	chr2:169694470-169701138	0	+	169700971	169701138	789624	4	152,33,90,193,	0,744,3422,6475,
#Partially deleted in new
chr2	169694486	169701118	chr2:169694486-169701118	0	+	169700971	169701118	789624	5	136,33,171,118,173,	0,728,2874,3378,6459,
#Partially deleted in new
chr2	169694487	169749682	chr2:169694487-169749682	0	+	169749534	169749682	789624	6	135,33,171,90,153,261,	0,727,2873,3405,46897,54934,
#Partially deleted in new
chr2	169694490	169749804	chr2:169694490-169749804	3	+	169735014	169749732	789624	6	132,33,171,1215,153,383,	0,724,2870,40522,46894,54931,
#Partially deleted in new
chr2	169695213	169698300	chr2:169695213-169698300	0	+	169695213	169695213	8553170	4	34,171,90,114,	0,2147,2679,2973,
#Partially deleted in new
chr2	169697392	169749759	chr2:169697392-169749759	1	+	169749534	169749732	789624	3	139,153,338,	0,43992,52029,
#Deleted in new
chr2	169727871	169728003	chr2:169727871-169728003	3	+	169727871	169727871	8553170	1	132,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	169733845	169751888	chr2:169733845-169751888	1	+	169735014	169749732	789624	4	242,1215,153,2467,	0,1167,7539,15576,
#Partially deleted in new
chr2	169735551	169773385	chr2:169735551-169773385	0	+	169735551	169773357	789624	3	676,153,66,	0,5833,37768,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	169740996	169749500	chr2:169740996-169749500	0	+	169740996	169740996	8553170	2	541,79,	0,8425,
#Partially deleted in new
chr2	169741492	169776989	chr2:169741492-169776989	0	+	169741492	169776472	789624	2	45,549,	0,34948,
#Deleted in new
chr2	169767184	169768799	chr2:169767184-169768799	7	-	169767184	169767184	16724991	2	118,1087,	0,528,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	169790092	169790885	chr2:169790092-169790885	7	+	169790092	169790092	16724991	1	793,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	169791932	169807071	chr2:169791932-169807071	2	+	169800960	169807071	789624	6	1900,75,104,175,108,101,	0,9019,13541,13732,14852,15038,
#Partially deleted in new
chr2	169798811	169812064	chr2:169798811-169812064	1	+	169800960	169811756	0	12	165,75,104,175,108,101,72,43,141,187,141,397,	0,2140,6662,6853,7973,8159,9670,10048,11471,12046,12371,12856,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	169798878	169806890	chr2:169798878-169806890	0	+	169800960	169806057	789624	6	98,75,104,175,116,106,	0,2073,6595,6786,7119,7906,
#Partially deleted in new
chr2	169798878	169807030	chr2:169798878-169807030	0	+	169805560	169807030	789624	5	98,104,175,108,60,	0,6595,6786,7906,8092,
#Partially deleted in new
chr2	169798879	169806007	chr2:169798879-169806007	0	+	169798879	169798879	8553170	4	97,75,104,343,	0,2072,6594,6785,
#Partially deleted in new
chr2	169799278	169812064	chr2:169799278-169812064	1	+	169800960	169811756	0	12	238,75,104,175,108,101,72,43,141,187,141,397,	0,1673,6195,6386,7506,7692,9203,9581,11004,11579,11904,12389,
#Partially deleted in new
chr2	169805743	169806978	chr2:169805743-169806978	0	+	169805743	169805743	8553170	2	96,194,	0,1041,
#Partially deleted in new
chr2	169806580	169810411	chr2:169806580-169810411	0	+	169806580	169806580	8553170	4	491,72,43,129,	0,1901,2279,3702,
#Partially deleted in new
chr2	169806835	169808666	chr2:169806835-169808666	0	+	169806835	169806835	8553170	2	236,185,	0,1646,
#Partially deleted in new
chr2	169808476	169810602	chr2:169808476-169810602	0	+	169808476	169808476	8553170	3	77,43,320,	0,383,1806,
#Partially deleted in new
chr2	169808476	169811044	chr2:169808476-169811044	0	+	169808476	169808476	8553170	3	426,141,187,	0,1806,2381,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	169810062	169810888	chr2:169810062-169810888	0	+	169810062	169810062	8553170	2	361,31,	0,795,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	169810080	169824905	chr2:169810080-169824905	1	-	169810338	169824597	789624	8	264,50,52,83,182,115,152,38,	0,2376,5396,9480,11011,11862,14408,14787,
#Partially deleted in new
chr2	169811756	169824914	chr2:169811756-169824914	1	-	169811819	169824597	789624	7	102,50,52,83,182,115,426,	0,700,3720,7804,9335,10186,12732,
#Partially deleted in new
chr2	169811756	169824931	chr2:169811756-169824931	3	-	169811819	169824597	789624	8	102,50,52,83,182,115,152,64,	0,700,3720,7804,9335,10186,12732,13111,
#Partially deleted in new
chr2	169811756	169824814	chr2:169811756-169824814	1	-	169811819	169824597	789624	6	102,50,52,83,152,33,	0,700,3720,7804,12732,13025,
#Partially deleted in new
chr2	169811756	169824925	chr2:169811756-169824925	1	-	169811819	169824597	789624	8	102,50,52,83,182,115,152,144,	0,700,3720,7804,9335,10186,12732,13025,
#Partially deleted in new
chr2	169811756	169821229	chr2:169811756-169821229	0	-	169811819	169821229	789624	5	102,68,52,83,138,	0,700,3720,7804,9335,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	169811757	169813175	chr2:169811757-169813175	0	-	169811757	169811757	8553170	2	101,719,	0,699,
#Partially deleted in new
chr2	169811762	169824901	chr2:169811762-169824901	1	-	169811819	169824597	789624	6	96,50,182,115,152,34,	0,694,9329,10180,12726,13105,
#Partially deleted in new
chr2	169811764	169824558	chr2:169811764-169824558	0	-	169819564	169824558	789624	6	94,50,52,83,115,70,	0,692,3712,7796,10178,12724,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	169811813	169824874	chr2:169811813-169824874	1	-	169812312	169824597	789624	7	693,52,83,182,115,152,93,	0,3663,7747,9278,10129,12675,12968,
#Partially deleted in new
chr2	169812469	169824913	chr2:169812469-169824913	0	-	169812469	169824597	789624	3	37,152,46,	0,12019,12398,
#Deleted in new
chr2	169824181	169824872	chr2:169824181-169824872	0	-	169824181	169824181	8553170	2	459,91,	0,600,
#Partially deleted in new
chr2	169827457	170084131	chr2:169827457-170084131	3	+	169827507	170081843	789624	39	595,140,159,144,50,67,131,229,180,134,87,66,90,129,53,134,88,140,97,142,105,174,461,89,150,134,111,201,137,86,103,104,125,108,126,180,210,140,2406,	0,44778,48333,50036,51067,63707,67723,69049,77656,78573,86602,96471,96626,98161,99234,99380,99862,101271,105454,115035,118830,120084,122147,130980,159187,166865,173846,179532,181346,187823,201888,213424,228002,233621,233860,245970,252356,253087,254268,
#Partially deleted in new
chr2	169827507	170084127	chr2:169827507-170084127	1	+	169827507	170081843	789624	39	545,140,159,144,50,67,131,229,180,134,87,66,90,129,53,134,86,142,97,142,105,174,461,89,150,134,111,201,137,86,103,104,125,108,126,180,210,140,2402,	0,44728,48283,49986,51017,63657,67673,68999,77606,78523,86552,96421,96576,98111,99184,99330,99812,101219,105404,114985,118780,120034,122097,130930,159137,166815,173796,179482,181296,187773,201838,213374,227952,233571,233810,245920,252306,253037,254218,
#Partially deleted in new
chr2	169928860	170084131	chr2:169928860-170084131	0	+	169928860	169964469	789624	23	8,97,142,105,174,461,89,146,61,134,111,213,137,51,86,98,104,108,126,204,210,140,2406,	0,4051,13632,17427,18681,20744,29577,35532,57873,65462,72443,78129,79943,85954,86420,100490,112021,132218,132457,144543,150953,151684,152865,
#Partially deleted in new
chr2	169946309	170084120	chr2:169946309-170084120	0	+	169946309	170081843	789624	19	83,174,461,89,150,134,111,213,137,86,103,104,125,108,126,180,210,140,2395,	0,1232,3295,12128,40335,48013,54994,60680,62494,68971,83036,94572,109150,114769,115008,127118,133504,134235,135416,
#Deleted in new
chr2	169947408	169949892	chr2:169947408-169949892	0	+	169947408	169947408	8553170	2	307,288,	0,2196,
#Partially deleted in new
chr2	169949481	169958521	chr2:169949481-169958521	0	+	169949481	169949481	8553170	2	584,84,	0,8956,
#Partially deleted in new
chr2	170001372	170082259	chr2:170001372-170082259	0	+	170001372	170081843	789624	14	42,201,137,86,87,103,104,125,108,126,180,210,140,534,	0,5617,7431,13908,15460,27973,39509,54087,59706,59945,72055,78441,79172,80353,
#Partially deleted in new
chr2	170008839	170084131	chr2:170008839-170084131	0	+	170008839	170015281	789624	12	101,132,86,103,104,125,108,126,180,210,140,2406,	0,5001,6441,20506,32042,46620,52239,52478,64588,70974,71705,72886,
#Partially deleted in new
chr2	170014039	170029435	chr2:170014039-170029435	0	+	170014039	170014039	8553170	3	400,86,90,	0,1241,15306,
#Partially deleted in new
chr2	170014802	170084131	chr2:170014802-170084131	0	+	170014802	170014802	8553170	10	564,103,104,125,108,126,180,210,140,2406,	0,14543,26079,40657,46276,46515,58625,65011,65742,66923,
#Partially deleted in new
chr2	170077223	170078294	chr2:170077223-170078294	7	-	170077223	170077223	16724991	2	371,401,	0,670,
#Partially deleted in new
chr2	170080023	170081855	chr2:170080023-170081855	0	+	170080023	170080023	8553170	2	661,130,	0,1702,
#Deleted in new
chr2	170119995	170120098	chr2:170119995-170120098	3	-	170119995	170119995	8553170	1	103,	0,
#Boundary problem: need 35, got 0, diff 35, mapped 0.0
chr2	170178144	170654481	chr2:170178144-170654481	0	+	170178287	170651700	789624	35	145,184,135,105,100,77,146,66,156,97,117,105,84,203,99,115,127,211,148,154,89,130,80,78,206,112,163,102,103,61,97,31,107,47,1499,	0,21063,22005,36234,36584,39174,57846,157240,191077,203871,204928,205565,208044,208961,213375,214236,222043,223336,224703,226102,227400,229570,265822,285223,288361,320447,321501,336776,341293,364761,365747,468764,473483,473963,474838,
#Boundary problem: need 35, got 0, diff 35, mapped 0.0
chr2	170178144	170654481	chr2:170178144-170654481	1	+	170178287	170653121	789624	35	145,184,135,105,100,77,146,66,156,97,117,105,84,203,99,115,127,211,148,154,89,130,80,78,206,112,163,81,102,103,61,97,107,47,1499,	0,21063,22005,36234,36584,39174,57846,157240,191077,203871,204928,205565,208044,208961,213375,214236,222043,223336,224703,226102,227400,229570,265822,285223,288361,320447,321501,323640,336776,341293,364761,365747,473483,473963,474838,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr2	170178144	170654481	chr2:170178144-170654481	3	+	170178287	170653121	789624	34	145,184,135,105,100,77,146,66,156,97,117,105,84,203,99,115,127,211,148,154,89,130,80,78,206,112,163,102,103,61,97,107,47,1499,	0,21063,22005,36234,36584,39174,57846,157240,191077,203871,204928,205565,208044,208961,213375,214236,222043,223336,224703,226102,227400,229570,265822,285223,288361,320447,321501,336776,341293,364761,365747,473483,473963,474838,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr2	170178144	170519978	chr2:170178144-170519978	0	+	170178144	170178144	8553170	30	145,184,135,105,100,77,146,66,156,97,117,105,84,203,99,115,127,211,148,154,89,130,80,78,206,112,163,81,102,541,	0,21063,22005,36234,36584,39174,57846,157240,191077,203871,204928,205565,208044,208961,213375,214236,222043,223336,224703,226102,227400,229570,265822,285223,288361,320447,321501,323640,336776,341293,
#Partially deleted in new
chr2	170180148	170499808	chr2:170180148-170499808	0	+	170180152	170499808	789624	27	33,184,135,105,100,77,146,66,156,97,117,105,84,203,99,115,127,211,148,154,89,130,80,78,206,112,163,	0,19059,20001,34230,34580,37170,55842,155236,189073,201867,202924,203561,206040,206957,211371,212232,220039,221332,222699,224098,225396,227566,263818,283219,286357,318443,319497,
#Partially deleted in new
chr2	170199207	170382766	chr2:170199207-170382766	0	+	170199207	170382127	789624	9	184,135,105,100,77,146,66,156,751,	0,942,15171,15521,18111,36783,136177,170014,182808,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr2	170199251	170655171	chr2:170199251-170655171	0	+	170199251	170199251	8553170	28	140,135,105,77,146,66,170,97,117,105,84,203,99,115,127,211,148,154,89,130,80,102,103,61,97,107,47,2189,	0,898,15127,18067,36739,136133,169956,182764,183821,184458,186937,187854,192268,193129,200936,202229,203596,204995,206293,208463,244715,315669,320186,343654,344640,452376,452856,453731,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	170334042	170344883	chr2:170334042-170344883	0	-	170334042	170334042	8553170	6	89,134,65,198,127,85,	0,703,3806,9416,10129,10756,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	170334048	170341410	chr2:170334048-170341410	0	-	170334048	170334048	8553170	5	83,134,328,324,25,	0,697,3800,6118,7337,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	170334098	170344928	chr2:170334098-170344928	0	-	170334098	170334098	8553170	6	33,134,100,198,127,130,	0,647,3750,9360,10073,10700,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	170334764	170344928	chr2:170334764-170344928	0	-	170334764	170334764	8553170	4	115,328,198,130,	0,3084,8694,10034,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	170334800	170344926	chr2:170334800-170344926	0	-	170334800	170334800	8553170	5	79,65,198,234,128,	0,3048,8658,9540,9998,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	170340517	170344928	chr2:170340517-170344928	0	-	170340517	170340517	8553170	3	257,198,130,	0,2941,4281,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	170340521	170344928	chr2:170340521-170344928	0	-	170340521	170340521	8553170	4	253,237,198,130,	0,667,2937,4277,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	170340552	170344928	chr2:170340552-170344928	0	-	170340552	170340552	8553170	3	222,179,130,	0,2906,4246,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	170340593	170344928	chr2:170340593-170344928	0	-	170340593	170340593	8553170	4	181,44,198,130,	0,792,2865,4205,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	170340638	170344928	chr2:170340638-170344928	0	-	170340638	170340638	8553170	4	136,241,198,130,	0,550,2820,4160,
#Partially deleted in new
chr2	170341100	170350943	chr2:170341100-170350943	1	-	170341100	170341100	789624	4	329,198,135,65,	0,2358,3698,9778,
#Partially deleted in new
chr2	170341112	170344901	chr2:170341112-170344901	0	-	170341112	170341112	8553170	3	317,179,103,	0,2346,3686,
#Partially deleted in new
chr2	170341113	170344928	chr2:170341113-170344928	0	-	170341113	170341113	8553170	4	316,198,24,130,	0,2345,2703,3685,
#Partially deleted in new
chr2	170341152	170350892	chr2:170341152-170350892	0	-	170341152	170341152	8553170	5	277,179,137,183,157,	0,2306,3843,9309,9583,
#Partially deleted in new
chr2	170341152	170350973	chr2:170341152-170350973	0	-	170341152	170341152	8553170	5	277,100,135,183,238,	0,2306,3646,9309,9583,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	170341153	170350343	chr2:170341153-170350343	0	-	170341153	170341153	8553170	5	276,198,135,174,26,	0,2305,3645,6798,9164,
#Partially deleted in new
chr2	170341164	170351108	chr2:170341164-170351108	0	-	170341164	170341164	8553170	3	265,198,230,	0,2294,9714,
#Partially deleted in new
chr2	170341190	170344928	chr2:170341190-170344928	0	-	170341190	170341190	8553170	3	239,97,130,	0,2268,3608,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	170341194	170350627	chr2:170341194-170350627	0	-	170341194	170341194	8553170	5	235,198,135,123,166,	0,2264,3604,8317,9267,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	170341194	170350373	chr2:170341194-170350373	0	-	170341194	170341194	8553170	5	235,198,135,65,56,	0,2264,3604,4983,9123,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	170341195	170350581	chr2:170341195-170350581	0	-	170341195	170341195	8553170	5	234,198,130,135,120,	0,2263,2976,3603,9266,
#Partially deleted in new
chr2	170341195	170408564	chr2:170341195-170408564	0	-	170341195	170341195	8553170	6	234,198,135,95,48,53,	0,2263,3603,42631,44642,67316,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	170341217	170346276	chr2:170341217-170346276	0	-	170341217	170341217	8553170	4	212,198,334,99,	0,2241,3581,4960,
#Partially deleted in new
chr2	170341237	170351108	chr2:170341237-170351108	0	-	170341237	170341237	8553170	4	192,198,135,230,	0,2221,3561,9641,
#Partially deleted in new
chr2	170341243	170351111	chr2:170341243-170351111	1	-	170341243	170341243	8553170	4	186,198,135,376,	0,2215,3555,9492,
#Partially deleted in new
chr2	170341320	170351099	chr2:170341320-170351099	1	-	170341320	170341320	8553170	5	109,198,135,183,221,	0,2138,3478,9141,9558,
#Partially deleted in new
chr2	170342103	170343656	chr2:170342103-170343656	1	-	170342103	170342103	8553170	2	240,198,	0,1355,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	170343586	170351102	chr2:170343586-170351102	0	-	170343586	170343586	8553170	5	70,135,228,183,367,	0,1212,2591,6875,7149,
#Partially deleted in new
chr2	170343586	170350942	chr2:170343586-170350942	0	-	170343586	170343586	8553170	4	70,334,327,207,	0,1212,6731,7149,
#Partially deleted in new
chr2	170343586	170350870	chr2:170343586-170350870	0	-	170343586	170343586	8553170	4	70,417,183,135,	0,1212,6875,7149,
#Partially deleted in new
chr2	170343586	170350916	chr2:170343586-170350916	0	-	170343586	170343586	8553170	4	70,334,183,181,	0,1212,6875,7149,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	170343586	170350641	chr2:170343586-170350641	0	-	170343586	170343586	8553170	6	70,135,70,228,174,180,	0,1212,1476,2591,4365,6875,
#Partially deleted in new
chr2	170343586	170351030	chr2:170343586-170351030	0	-	170343586	170343586	8553170	3	70,334,262,	0,1212,7182,
#Partially deleted in new
chr2	170343586	170350988	chr2:170343586-170350988	0	-	170343586	170343586	8553170	4	51,135,183,253,	0,1212,6875,7149,
#Partially deleted in new
chr2	170343586	170350978	chr2:170343586-170350978	0	-	170343586	170343586	8553170	5	70,135,14,183,243,	0,1212,6251,6875,7149,
#Partially deleted in new
chr2	170343587	170351103	chr2:170343587-170351103	0	-	170343587	170343587	8553170	4	69,135,327,368,	0,1211,6730,7148,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	170343590	170351117	chr2:170343590-170351117	0	-	170343590	170343590	8553170	5	66,135,174,183,239,	0,1208,4361,6871,7288,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	170343593	170350763	chr2:170343593-170350763	0	-	170343593	170343593	8553170	6	63,135,70,65,183,28,	0,1205,1469,2584,6868,7142,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	170343605	170350792	chr2:170343605-170350792	0	-	170343605	170343605	8553170	6	51,135,153,174,327,57,	0,1193,1457,4346,6712,7130,
#Partially deleted in new
chr2	170344798	170351118	chr2:170344798-170351118	1	-	170344798	170344798	8553170	3	135,110,383,	0,5663,5937,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	170344834	170351071	chr2:170344834-170351071	0	-	170344834	170344834	8553170	4	99,65,183,336,	0,1343,5627,5901,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	170344848	170351055	chr2:170344848-170351055	1	-	170344848	170344848	8553170	4	85,148,183,320,	0,3103,5613,5887,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	170346299	170351012	chr2:170346299-170351012	1	-	170346299	170346299	8553170	3	106,327,277,	0,4018,4436,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	170346308	170348654	chr2:170346308-170348654	1	-	170346308	170346308	8553170	2	113,703,	0,1643,
#Partially deleted in new
chr2	170407729	170412425	chr2:170407729-170412425	0	+	170407729	170407729	8553170	2	115,725,	0,3971,
#Deleted in new
chr2	170601661	170602228	chr2:170601661-170602228	7	-	170601661	170601661	16724991	1	567,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	170640373	170695374	chr2:170640373-170695374	3	-	170640373	170640373	8553170	10	793,34,228,158,110,54,164,96,164,388,	0,1056,3343,4112,7583,9548,27951,42021,42522,54613,
#Deleted in new
chr2	170690563	170690742	chr2:170690563-170690742	3	+	170690563	170690563	8553170	1	179,	0,
#Partially deleted in new
chr2	170712450	170714567	chr2:170712450-170714567	3	-	170712450	170712450	789624	1	2117,	0,
#Partially deleted in new
chr2	170715350	170718078	chr2:170715350-170718078	3	+	170715512	170717404	789624	2	213,1820,	0,908,
#Partially deleted in new
chr2	170716041	170716488	chr2:170716041-170716488	0	+	170716041	170716041	8553170	2	27,230,	0,217,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	170723085	170770766	chr2:170723085-170770766	3	-	170723085	170723085	8553170	7	508,44,130,630,116,656,65,	0,4199,4573,7282,10793,17546,47616,
#Partially deleted in new
chr2	170725736	170727855	chr2:170725736-170727855	0	-	170725736	170725736	8553170	3	353,44,197,	0,1548,1922,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	170727718	170729440	chr2:170727718-170729440	1	-	170727718	170727718	8553170	2	70,862,	0,860,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	170730932	170770768	chr2:170730932-170770768	0	-	170730932	170730932	8553170	2	65,67,	0,39769,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	170730951	170743956	chr2:170730951-170743956	0	-	170730951	170730951	8553170	2	46,65,	0,12940,
#Partially deleted in new
chr2	170751804	170752788	chr2:170751804-170752788	7	+	170751804	170751804	16724991	1	984,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	170771112	170778148	chr2:170771112-170778148	3	+	170771112	170771112	8553170	4	75,31,49,505,	0,6034,6264,6531,
#Partially deleted in new
chr2	170771112	170777742	chr2:170771112-170777742	1	+	170771112	170771112	789624	5	315,67,31,49,99,	0,4540,6034,6264,6531,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	170783166	170783271	chr2:170783166-170783271	3	+	170783166	170783166	8553170	1	105,	0,
#Partially deleted in new
chr2	170783785	170798971	chr2:170783785-170798971	3	+	170783838	170798894	789624	5	81,188,58,72,202,	0,860,9077,14255,14984,
#Partially deleted in new
chr2	170813212	170829585	chr2:170813212-170829585	0	+	170818591	170829585	789624	4	210,145,63,111,	0,5316,8874,16262,
#Partially deleted in new
chr2	170816113	170822116	chr2:170816113-170822116	0	+	170818591	170822116	789624	4	143,321,145,30,	0,614,2415,5973,
#Deleted in new
chr2	170816292	170817172	chr2:170816292-170817172	0	-	170816292	170816292	8553170	2	193,319,	0,561,
#Deleted in new
chr2	170816302	170817895	chr2:170816302-170817895	1	-	170816302	170816302	8553170	3	183,179,178,	0,551,1415,
#Deleted in new
chr2	170816404	170818037	chr2:170816404-170818037	3	-	170816404	170816404	8553170	3	81,146,320,	0,449,1313,
#Partially deleted in new
chr2	170816561	170861151	chr2:170816561-170861151	3	+	170818591	170859882	0	17	487,145,63,159,243,91,113,116,80,55,117,65,79,150,108,90,1443,	0,1967,5525,12913,14388,20231,27483,28944,29144,29447,31114,32724,36152,37311,40456,42242,43147,
#Partially deleted in new
chr2	170816561	170861135	chr2:170816561-170861135	1	+	170818591	170849332	0	18	487,145,63,159,243,91,113,116,80,55,117,112,65,79,150,108,90,1427,	0,1967,5525,12913,14388,20231,27483,28944,29144,29447,31114,32121,32724,36152,37311,40456,42242,43147,
#Partially deleted in new
chr2	170816689	170842756	chr2:170816689-170842756	1	+	170818591	170842605	0	7	363,145,63,159,243,91,188,	0,1839,5397,12785,14260,20103,25879,
#Partially deleted in new
chr2	170816911	170842759	chr2:170816911-170842759	1	+	170818591	170842605	0	7	137,145,63,159,243,91,191,	0,1617,5175,12563,14038,19881,25657,
#Partially deleted in new
chr2	170817037	170859916	chr2:170817037-170859916	0	+	170818591	170845569	789624	16	11,145,63,159,243,91,116,80,55,117,65,79,150,108,90,208,	0,1491,5049,12437,13912,19755,28468,28668,28971,30638,32248,35676,36835,39980,41766,42671,
#Partially deleted in new
chr2	170817254	170830991	chr2:170817254-170830991	0	+	170818591	170830991	789624	5	162,145,63,159,42,	0,1274,4832,12220,13695,
#Partially deleted in new
chr2	170817768	170831008	chr2:170817768-170831008	0	+	170818591	170831008	789624	5	130,145,63,159,59,	0,760,4318,11706,13181,
#Partially deleted in new
chr2	170817769	170861151	chr2:170817769-170861151	0	+	170818591	170849332	0	17	904,63,159,243,91,113,116,80,55,117,112,65,79,150,108,90,1443,	0,4317,11705,13180,19023,26275,27736,27936,28239,29906,30913,31516,34944,36103,39248,41034,41939,
#Partially deleted in new
chr2	170818610	170844157	chr2:170818610-170844157	0	+	170818610	170818610	8553170	7	63,63,159,243,91,80,113,	0,3476,10864,12339,18182,23958,25434,
#Partially deleted in new
chr2	170821717	170829620	chr2:170821717-170829620	0	+	170821717	170821717	8553170	2	432,146,	0,7757,
#Partially deleted in new
chr2	170822086	170829872	chr2:170822086-170829872	0	+	170822086	170829665	789624	2	63,398,	0,7388,
#Partially deleted in new
chr2	170828967	170831090	chr2:170828967-170831090	0	+	170828967	170828967	8553170	2	666,141,	0,1982,
#Partially deleted in new
chr2	170843801	170845543	chr2:170843801-170845543	0	+	170843801	170843801	8553170	2	356,211,	0,1531,
#Partially deleted in new
chr2	170849066	170860253	chr2:170849066-170860253	0	+	170849066	170849066	8553170	6	284,79,150,108,90,545,	0,3647,4806,7951,9737,10642,
#Partially deleted in new
chr2	170852487	170861147	chr2:170852487-170861147	0	+	170852487	170852487	8553170	4	1535,108,90,1439,	0,4530,6316,7221,
#Partially deleted in new
chr2	170928463	170956514	chr2:170928463-170956514	0	+	170928463	170928463	8553170	7	97,81,204,87,131,133,79,	0,19886,21075,21740,22864,26186,27972,
#Partially deleted in new
chr2	170928525	170967129	chr2:170928525-170967129	3	+	170929340	170966130	0	10	878,81,204,87,131,133,124,87,108,1340,	0,19824,21013,21678,22802,26124,27910,33137,34313,37264,
#Partially deleted in new
chr2	170929196	170951366	chr2:170929196-170951366	0	+	170929340	170949543	789624	5	207,31,204,87,39,	0,19153,20342,21007,22131,
#Partially deleted in new
chr2	170929252	170965891	chr2:170929252-170965891	0	+	170929252	170929252	8553170	8	151,81,204,87,131,87,108,102,	0,19097,20286,20951,22075,32410,33586,36537,
#Partially deleted in new
chr2	170929252	170948761	chr2:170929252-170948761	0	+	170929252	170929252	8553170	2	151,412,	0,19097,
#Partially deleted in new
chr2	170929256	170949715	chr2:170929256-170949715	0	+	170929340	170929870	789624	4	147,125,81,177,	0,560,19093,20282,
#Partially deleted in new
chr2	170929266	170949743	chr2:170929266-170949743	0	+	170929340	170929899	789624	4	137,201,81,205,	0,474,19083,20272,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	170929320	170966623	chr2:170929320-170966623	0	+	170929340	170936632	789624	11	83,104,81,204,87,131,133,124,87,108,834,	0,7303,19029,20218,20883,22007,25329,27115,32342,33518,36469,
#Partially deleted in new
chr2	170929432	170949659	chr2:170929432-170949659	0	+	170929432	170929432	8553170	3	509,81,121,	0,18917,20106,
#Partially deleted in new
chr2	170950031	170951614	chr2:170950031-170951614	0	+	170950031	170950031	8553170	2	259,287,	0,1296,
#Partially deleted in new
chr2	170953817	170966601	chr2:170953817-170966601	0	+	170953817	170953817	8553170	5	965,124,87,108,812,	0,2618,7845,9021,11972,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr2	170990822	171160833	chr2:170990822-171160833	1	-	170993779	171160428	789624	22	3134,108,112,136,170,90,92,82,98,67,189,137,111,93,90,96,47,63,76,72,119,544,	0,5830,6889,15324,15651,15977,16149,20550,24028,37516,55351,58991,59241,62938,64260,65648,67328,69101,70258,91958,126916,169467,
#Partially deleted in new
chr2	170990822	171160833	chr2:170990822-171160833	3	-	170993779	171160428	789624	21	3134,108,112,136,170,90,92,82,98,67,189,137,111,93,90,96,47,76,72,119,544,	0,5830,6889,15324,15651,15977,16149,20550,24028,37516,55351,58991,59241,62938,64260,65648,67328,70258,91958,126916,169467,
#Partially deleted in new
chr2	170992153	171160495	chr2:170992153-171160495	0	-	171081687	171160428	789624	23	1803,108,112,136,170,90,92,82,98,258,67,189,137,111,93,90,96,47,76,69,72,119,206,	0,4499,5558,13993,14320,14646,14818,19219,22697,30718,36185,54020,57660,57910,61607,62929,64317,65997,68927,89486,90627,125585,168136,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr2	170993506	171231314	chr2:170993506-171231314	1	-	170993779	171117852	789624	21	450,108,112,136,170,90,92,82,98,67,189,137,111,93,90,96,47,76,72,119,170,	0,3146,4205,12640,12967,13293,13465,17866,21344,34832,52667,56307,56557,60254,61576,62964,64644,67574,89274,124232,237638,
#Partially deleted in new
chr2	170993726	171066973	chr2:170993726-171066973	1	-	170993779	171066883	789624	19	230,108,112,136,170,90,92,82,98,67,189,137,111,93,90,96,47,76,132,	0,2926,3985,12420,12747,13073,13245,17646,21124,34612,52447,56087,56337,60034,61356,62744,64424,67354,73115,
#Partially deleted in new
chr2	170996723	171160900	chr2:170996723-171160900	0	-	171023123	171160428	789624	21	37,112,136,170,90,92,82,98,258,67,189,137,111,93,90,96,47,76,72,119,611,	0,988,9423,9750,10076,10248,14649,18127,26148,31615,49450,53090,53340,57037,58359,59747,61427,64357,86057,121015,163566,
#Partially deleted in new
chr2	171028344	171160564	chr2:171028344-171160564	0	-	171028344	171028344	8553170	5	61,76,72,119,275,	0,32736,54436,89394,131945,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	171045230	171055129	chr2:171045230-171055129	0	-	171045230	171045230	8553170	4	1132,137,111,1369,	0,4583,4833,8530,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	171053716	171091810	chr2:171053716-171091810	0	-	171053716	171053716	8553170	7	137,90,96,47,76,72,197,	0,1366,2754,4434,7364,29064,37897,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	171053781	171066936	chr2:171053781-171066936	0	-	171053781	171066883	789624	7	72,90,96,47,63,76,95,	0,1301,2689,4369,6142,7299,13060,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	171082780	171155770	chr2:171082780-171155770	0	-	171082780	171082780	8553170	5	72,119,74,75,181,	0,34958,71070,71649,72809,
#Partially deleted in new
chr2	171117751	171159827	chr2:171117751-171159827	0	-	171117751	171117751	8553170	2	106,240,	0,41836,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	171317404	171434802	chr2:171317404-171434802	3	-	171324171	171392185	789624	10	6958,66,107,140,64,50,371,92,155,129,	0,8436,8637,13154,14399,20048,21779,43017,74638,117269,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	171317408	171434086	chr2:171317408-171434086	1	-	171324258	171392185	789624	10	6954,66,107,140,64,50,371,92,155,204,	0,8432,8633,13150,14395,20044,21775,43013,74634,116474,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	171323250	171434109	chr2:171323250-171434109	0	-	171325890	171360506	789624	9	1112,66,140,64,50,371,92,124,227,	0,2590,7308,8553,14202,15933,37171,91352,110632,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	171323787	171332795	chr2:171323787-171332795	0	-	171323787	171323787	8553170	5	575,66,107,140,992,	0,2053,2254,6771,8016,
#Partially deleted in new
chr2	171323900	171327065	chr2:171323900-171327065	0	-	171323900	171323900	8553170	4	462,66,107,62,	0,1940,2141,3103,
#Partially deleted in new
chr2	171323920	171339256	chr2:171323920-171339256	0	-	171324258	171339256	789624	7	442,66,107,140,103,50,73,	0,1920,2121,6638,7844,13532,15263,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	171323932	171434087	chr2:171323932-171434087	0	-	171325890	171392185	789624	10	430,66,140,64,50,371,92,155,124,205,	0,1908,6626,7871,13520,15251,36489,68110,90670,109950,
#Partially deleted in new
chr2	171323997	171339213	chr2:171323997-171339213	0	-	171323997	171323997	8553170	3	365,50,30,	0,13455,15186,
#Partially deleted in new
chr2	171324024	171326381	chr2:171324024-171326381	0	-	171324024	171324024	8553170	3	338,66,340,	0,1816,2017,
#Partially deleted in new
chr2	171324100	171326153	chr2:171324100-171326153	0	-	171324100	171324100	8553170	2	262,313,	0,1740,
#Partially deleted in new
chr2	171324242	171434788	chr2:171324242-171434788	0	-	171324242	171324242	789624	7	120,66,107,58,64,92,115,	0,1598,1799,6316,7561,36179,110431,
#Partially deleted in new
chr2	171325890	171392185	chr2:171325890-171392185	1	-	171325890	171392185	789624	7	16,140,64,50,371,92,143,	0,4668,5913,11562,13293,34531,66152,
#Partially deleted in new
chr2	171325890	171360506	chr2:171325890-171360506	1	-	171325890	171360506	789624	6	16,140,64,50,371,85,	0,4668,5913,11562,13293,34531,
#Partially deleted in new
chr2	171330624	171434018	chr2:171330624-171434018	0	-	171330624	171392185	789624	5	74,371,92,155,136,	0,8559,29797,61418,103258,
#Partially deleted in new
chr2	171337471	171434802	chr2:171337471-171434802	0	-	171337471	171337471	8553170	4	31,371,92,129,	0,1712,22950,97202,
#Partially deleted in new
chr2	171339330	171434780	chr2:171339330-171434780	0	-	171339330	171392185	789624	4	224,92,155,107,	0,21091,52712,95343,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	171339474	171434780	chr2:171339474-171434780	0	-	171339474	171392185	789624	5	80,92,155,124,107,	0,20947,52568,75128,95199,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	171339540	171433990	chr2:171339540-171433990	0	-	171339540	171392185	789624	5	14,92,155,194,108,	0,20881,52502,93485,94342,
#Partially deleted in new
chr2	171374930	171375278	chr2:171374930-171375278	7	-	171374930	171374930	16724991	1	348,	0,
#Partially deleted in new
chr2	171434216	171482158	chr2:171434216-171482158	0	+	171434216	171434216	8553170	13	54,104,91,137,79,90,105,143,110,91,84,156,1185,	0,866,9306,14464,15662,18907,23754,34671,39649,42643,43770,45821,46757,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	171434250	171485052	chr2:171434250-171485052	3	+	171434577	171481114	789624	14	453,104,91,137,79,90,105,106,143,110,91,84,156,4079,	0,832,9272,14430,15628,18873,23720,24121,34637,39615,42609,43736,45787,46723,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	171434250	171485048	chr2:171434250-171485048	1	+	171434577	171481114	789624	12	453,104,91,137,79,90,105,106,143,84,156,4075,	0,832,9272,14430,15628,18873,23720,24121,34637,43736,45787,46723,
#Partially deleted in new
chr2	171434656	171449925	chr2:171434656-171449925	0	+	171434656	171434656	8553170	4	47,91,137,47,	0,8866,14024,15222,
#Partially deleted in new
chr2	171434701	171449958	chr2:171434701-171449958	0	+	171434701	171434701	8553170	5	296,104,91,137,80,	0,381,8821,13979,15177,
#Partially deleted in new
chr2	171443136	171450075	chr2:171443136-171450075	0	+	171443136	171443136	8553170	3	477,137,197,	0,5544,6742,
#Partially deleted in new
chr2	171453121	171481167	chr2:171453121-171481167	1	+	171468889	171481114	789624	8	92,105,143,110,91,84,156,194,	0,4849,15766,20744,23738,24865,26916,27852,
#Partially deleted in new
chr2	171453123	171481167	chr2:171453123-171481167	0	+	171453123	171481114	789624	7	90,143,110,91,84,156,194,	0,15764,20742,23736,24863,26914,27850,
#Partially deleted in new
chr2	171468976	171474384	chr2:171468976-171474384	0	+	171468976	171468976	8553170	2	54,519,	0,4889,
#Partially deleted in new
chr2	171472869	171481279	chr2:171472869-171481279	0	+	171472869	171481114	789624	6	86,110,91,84,156,306,	0,996,3990,5117,7168,8104,
#Deleted in new
chr2	171479655	171481132	chr2:171479655-171481132	0	+	171479655	171479655	8553170	2	538,159,	0,1318,
#Deleted in new
chr2	171491421	171491931	chr2:171491421-171491931	7	+	171491421	171491421	16724991	1	510,	0,
#Deleted in new
chr2	171492904	171493095	chr2:171492904-171493095	7	+	171492904	171492904	16724991	1	191,	0,
#Deleted in new
chr2	171517269	171517716	chr2:171517269-171517716	7	-	171517269	171517269	16724991	1	447,	0,
#Partially deleted in new
chr2	171522246	171555607	chr2:171522246-171555607	1	+	171522272	171554827	789624	4	45,209,155,1084,	0,19338,31099,32277,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	171522347	171558133	chr2:171522347-171558133	3	+	171522545	171554827	789624	4	391,209,155,3610,	0,19237,30998,32176,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	171522476	171557646	chr2:171522476-171557646	1	+	171522545	171554649	789624	3	262,155,3123,	0,30869,32047,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	171522510	171541128	chr2:171522510-171541128	0	+	171522510	171522510	8553170	2	228,321,	0,18297,
#Partially deleted in new
chr2	171523078	171554607	chr2:171523078-171554607	0	+	171523236	171554607	789624	4	234,209,155,84,	0,18506,30267,31445,
#Deleted in new
chr2	171587092	171587259	chr2:171587092-171587259	7	+	171587092	171587092	16724991	1	167,	0,
#Partially deleted in new
chr2	171687408	171748411	chr2:171687408-171748411	1	+	171690155	171747889	0	16	219,117,118,91,116,96,163,100,126,147,114,134,145,141,126,636,	0,2738,5368,19878,27919,38209,38510,38785,39382,40412,40896,41308,42300,56640,58393,60367,
#Partially deleted in new
chr2	171687408	171726081	chr2:171687408-171726081	0	+	171690155	171726081	789624	8	219,117,118,91,60,116,96,163,	0,2738,5368,19878,25358,27919,38209,38510,
#Partially deleted in new
chr2	171687469	171748409	chr2:171687469-171748409	3	+	171690155	171747889	0	18	158,117,118,18,91,60,116,96,163,100,126,147,114,134,145,141,126,634,	0,2677,5307,19077,19817,25297,27858,38148,38449,38724,39321,40351,40835,41247,42239,56579,58332,60306,
#Partially deleted in new
chr2	171687470	171747989	chr2:171687470-171747989	1	+	171690155	171747889	0	16	157,117,118,145,116,96,163,100,126,147,114,134,145,141,126,214,	0,2676,5306,19762,27857,38147,38448,38723,39320,40350,40834,41246,42238,56578,58331,60305,
#Partially deleted in new
chr2	171687471	171725713	chr2:171687471-171725713	0	+	171690155	171725713	789624	7	156,117,118,145,60,116,96,	0,2675,5305,19761,25295,27856,38146,
#Partially deleted in new
chr2	171687471	171693084	chr2:171687471-171693084	0	+	171687471	171687471	8553170	3	156,117,308,	0,2675,5305,
#Partially deleted in new
chr2	171687500	171748411	chr2:171687500-171748411	1	+	171690155	171747889	0	16	127,117,118,91,116,96,163,100,126,147,114,134,145,141,126,633,	0,2646,5276,19786,27827,38117,38418,38693,39290,40320,40804,41216,42208,56548,58301,60278,
#Partially deleted in new
chr2	171687671	171748411	chr2:171687671-171748411	1	+	171690155	171747889	0	16	202,117,118,91,116,96,163,100,126,147,114,134,145,141,126,636,	0,2475,5105,19615,27656,37946,38247,38522,39119,40149,40633,41045,42037,56377,58130,60104,
#Partially deleted in new
chr2	171687704	171725693	chr2:171687704-171725693	0	+	171690155	171725693	789624	6	169,117,118,145,116,76,	0,2442,5072,19528,27623,37913,
#Partially deleted in new
chr2	171687707	171748011	chr2:171687707-171748011	1	+	171690155	171747889	0	17	166,117,118,91,60,116,96,163,100,126,147,114,134,145,141,126,236,	0,2439,5069,19579,25059,27620,37910,38211,38486,39083,40113,40597,41009,42001,56341,58094,60068,
#Partially deleted in new
chr2	171687743	171748416	chr2:171687743-171748416	1	+	171690155	171747889	0	18	130,117,118,18,91,60,116,96,163,100,126,147,114,134,145,141,126,641,	0,2403,5033,18803,19543,25023,27584,37874,38175,38450,39047,40077,40561,40973,41965,56305,58058,60032,
#Partially deleted in new
chr2	171687754	171715350	chr2:171687754-171715350	0	+	171690155	171715350	789624	6	119,117,118,145,60,23,	0,2392,5022,19478,25012,27573,
#Partially deleted in new
chr2	171687775	171748420	chr2:171687775-171748420	1	+	171690155	171747889	0	18	98,117,118,18,91,60,116,96,163,100,126,147,114,134,145,141,126,642,	0,2371,5001,18771,19511,24991,27552,37842,38143,38418,39015,40045,40529,40941,41933,56273,58026,60003,
#Partially deleted in new
chr2	171687791	171725955	chr2:171687791-171725955	0	+	171690155	171725641	789624	6	82,117,118,116,96,37,	0,2355,4985,27536,37826,38127,
#Partially deleted in new
chr2	171687880	171726913	chr2:171687880-171726913	0	+	171690155	171726913	789624	9	123,117,118,91,116,96,163,100,123,	0,2266,4896,19406,27447,37737,38038,38313,38910,
#Partially deleted in new
chr2	171688005	171715351	chr2:171688005-171715351	0	+	171690155	171715351	789624	7	161,117,118,18,91,60,24,	0,2141,4771,18541,19281,24761,27322,
#Partially deleted in new
chr2	171688010	171715368	chr2:171688010-171715368	0	+	171690155	171715368	789624	5	156,117,118,145,41,	0,2136,4766,19222,27317,
#Partially deleted in new
chr2	171688302	171725650	chr2:171688302-171725650	0	+	171690155	171725650	789624	6	56,117,118,145,116,33,	0,1844,4474,18930,27025,37315,
#Partially deleted in new
chr2	171688302	171725946	chr2:171688302-171725946	0	+	171690155	171725946	789624	7	56,117,118,91,116,96,28,	0,1844,4474,18984,27025,37315,37616,
#Partially deleted in new
chr2	171688309	171712779	chr2:171688309-171712779	0	+	171690155	171712779	789624	6	49,178,117,118,91,13,	0,161,1837,4467,18977,24457,
#Partially deleted in new
chr2	171690144	171725677	chr2:171690144-171725677	0	+	171690155	171725677	789624	6	119,118,91,60,116,60,	0,2632,17142,22622,25183,35473,
#Partially deleted in new
chr2	171706889	171748409	chr2:171706889-171748409	0	+	171706889	171706889	8553170	14	488,60,116,96,163,100,126,147,114,134,145,141,126,634,	0,5877,8438,18728,19029,19304,19901,20931,21415,21827,22819,37159,38912,40886,
#Deleted in new
chr2	171712401	171715376	chr2:171712401-171715376	0	+	171712401	171712401	8553170	2	425,49,	0,2926,
#Partially deleted in new
chr2	171715389	171726852	chr2:171715389-171726852	0	+	171715389	171715389	8553170	4	54,96,375,62,	0,10228,10529,11401,
#Partially deleted in new
chr2	171726557	171748407	chr2:171726557-171748407	0	+	171726557	171726557	8553170	8	359,147,114,134,145,141,126,632,	0,1263,1747,2159,3151,17491,19244,21218,
#Partially deleted in new
chr2	171784369	171894252	chr2:171784369-171894252	3	-	171785273	171894214	0	18	1106,91,159,139,141,81,53,159,82,85,94,139,147,140,116,143,54,50,	0,3201,3419,7081,9257,25236,25854,28969,30751,42428,49593,50357,52751,59999,71464,84311,108835,109833,
#Partially deleted in new
chr2	171784774	171894223	chr2:171784774-171894223	0	-	171844453	171894214	789624	17	701,91,159,139,141,81,53,159,82,85,94,139,147,140,143,54,21,	0,2796,3014,6676,8852,24831,25449,28564,30346,42023,49188,49952,52346,59594,83906,108430,109428,
#Partially deleted in new
chr2	171784831	171788942	chr2:171784831-171788942	0	-	171784831	171784831	8553170	3	644,91,1154,	0,2739,2957,
#Partially deleted in new
chr2	171809424	171810280	chr2:171809424-171810280	0	-	171809424	171809424	8553170	2	262,57,	0,799,
#Partially deleted in new
chr2	171815108	171834335	chr2:171815108-171834335	0	-	171815108	171815108	8553170	3	94,85,373,	0,11689,18854,
#Partially deleted in new
chr2	171834030	171894244	chr2:171834030-171894244	0	-	171837203	171894214	789624	9	26,139,147,140,104,116,143,54,42,	0,696,3090,10338,14142,21803,34650,59174,60172,
#Partially deleted in new
chr2	171837148	171893258	chr2:171837148-171893258	0	-	171845768	171893258	789624	8	119,140,132,104,21,116,143,54,	0,7220,8578,11024,15519,18685,31532,56056,
#Partially deleted in new
chr2	171844368	171999855	chr2:171844368-171999855	0	-	171844368	171844368	8553170	5	140,116,143,54,177,	0,11465,24312,48836,155310,
#Partially deleted in new
chr2	171855800	171999792	chr2:171855800-171999792	0	-	171855800	171855800	8553170	5	149,143,54,96,114,	0,12880,37404,135546,143878,
#Partially deleted in new
chr2	171855926	171999859	chr2:171855926-171999859	0	-	171855926	171855926	8553170	5	23,143,54,152,181,	0,12754,37278,65153,143752,
#Deleted in new
chr2	171856565	171856670	chr2:171856565-171856670	3	-	171856565	171856565	8553170	1	105,	0,
#Partially deleted in new
chr2	171922447	171983682	chr2:171922447-171983682	0	+	171922500	171952909	789624	10	60,105,121,180,122,105,107,152,117,498,	0,3089,30433,42890,43339,43961,44395,53709,56799,60737,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	171922461	171979995	chr2:171922461-171979995	0	+	171922500	171965796	789624	9	46,105,76,180,122,105,107,152,749,	0,3075,24246,42876,43325,43947,44381,53695,56785,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	171922461	171923475	chr2:171922461-171923475	0	+	171922461	171922461	8553170	2	46,554,	0,460,
#Partially deleted in new
chr2	171922464	171983682	chr2:171922464-171983682	3	+	171922500	171983352	789624	11	43,105,76,121,180,122,105,107,152,117,498,	0,3072,24243,30416,42873,43322,43944,44378,53692,56782,60720,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	171922606	171983623	chr2:171922606-171983623	0	+	171922606	171922606	8553170	11	2321,105,76,121,180,122,105,107,152,117,439,	0,2930,24101,30274,42731,43180,43802,44236,53550,56640,60578,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	171964832	171980855	chr2:171964832-171980855	0	+	171964832	171964832	8553170	4	685,1163,152,1609,	0,954,11324,14414,
#Partially deleted in new
chr2	171999582	172082430	chr2:171999582-172082430	3	+	171999969	172080406	789624	10	427,158,150,149,43,164,98,48,79,2103,	0,61915,64128,66021,66681,71324,78214,79632,80545,80745,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	171999942	172064414	chr2:171999942-172064414	0	+	171999942	171999942	8553170	3	67,158,704,	0,61555,63768,
#Partially deleted in new
chr2	171999954	172061994	chr2:171999954-172061994	0	+	171999954	171999954	8553170	2	55,497,	0,61543,
#Partially deleted in new
chr2	172021798	172063750	chr2:172021798-172063750	0	+	172021798	172021798	8553170	3	69,158,40,	0,39699,41912,
#Partially deleted in new
chr2	172061572	172080499	chr2:172061572-172080499	0	+	172061572	172061572	8553170	7	83,150,43,164,98,48,372,	0,2138,4691,9334,16224,17642,18555,
#Partially deleted in new
chr2	172065603	172072454	chr2:172065603-172072454	0	+	172065603	172065603	8553170	4	149,43,164,104,	0,660,5303,6747,
#Deleted in new
chr2	172070662	172080479	chr2:172070662-172080479	0	+	172070662	172070662	8553170	4	408,98,48,352,	0,7134,8552,9465,
#Deleted in new
chr2	172084739	172086854	chr2:172084739-172086854	0	+	172085677	172086854	789624	3	142,679,201,	0,572,1914,
#Deleted in new
chr2	172084748	172088051	chr2:172084748-172088051	0	+	172085677	172088051	789624	4	133,380,200,49,	0,862,1905,3254,
#Deleted in new
chr2	172085225	172089677	chr2:172085225-172089677	3	+	172085677	172088257	789624	3	765,200,1675,	0,1428,2777,
#Deleted in new
chr2	172085535	172089677	chr2:172085535-172089677	1	+	172085677	172088079	789624	2	455,1675,	0,2467,
#Deleted in new
chr2	172085556	172087138	chr2:172085556-172087138	0	+	172085556	172085556	8553170	2	434,485,	0,1097,
#Deleted in new
chr2	172086266	172089312	chr2:172086266-172089312	0	+	172086266	172086266	8553170	2	587,1310,	0,1736,
#Deleted in new
chr2	172087366	172088373	chr2:172087366-172088373	0	+	172087366	172087366	8553170	2	202,371,	0,636,
#Deleted in new
chr2	172099438	172102900	chr2:172099438-172102900	3	-	172100542	172102538	789624	3	1506,185,762,	0,2023,2700,
#Deleted in new
chr2	172100556	172102900	chr2:172100556-172102900	1	-	172101392	172102538	789624	2	1090,762,	0,1582,
#Partially deleted in new
chr2	172103005	172109982	chr2:172103005-172109982	3	+	172103005	172103005	789624	5	263,95,318,81,193,	0,932,2877,5896,6784,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	172423806	172424173	chr2:172423806-172424173	3	-	172423806	172423806	8553170	1	367,	0,
#Partially deleted in new
chr2	172427353	172474977	chr2:172427353-172474977	0	+	172467515	172474977	789624	7	117,125,80,256,132,211,49,	0,38185,40127,41771,43620,46701,47575,
#Partially deleted in new
chr2	172427417	172504534	chr2:172427417-172504534	1	+	172467515	172501879	789624	26	53,125,80,256,117,211,194,89,119,99,62,161,144,116,190,84,80,78,103,174,99,111,99,126,130,444,	0,38121,40063,41707,45356,46637,47511,48179,48977,52223,52572,57364,57703,59605,59846,60129,60310,60543,60708,62067,63606,63803,64007,70557,74354,76673,
#Partially deleted in new
chr2	172427554	172506230	chr2:172427554-172506230	3	+	172427788	172501879	789624	26	416,125,80,256,132,211,194,89,119,99,62,161,144,116,190,84,80,78,103,174,99,111,99,126,130,2140,	0,37984,39926,41570,43419,46500,47374,48042,48840,52086,52435,57227,57566,59468,59709,59992,60173,60406,60571,61930,63469,63666,63870,70420,74217,76536,
#Deleted in new
chr2	172427773	172428603	chr2:172427773-172428603	3	-	172427773	172427773	8553170	2	174,384,	0,446,
#Partially deleted in new
chr2	172427788	172506282	chr2:172427788-172506282	1	+	172427788	172504252	789624	25	182,125,80,256,132,211,194,89,119,99,62,161,144,116,190,84,80,78,103,174,99,111,99,126,2192,	0,37750,39692,41336,43185,46266,47140,47808,48606,51852,52201,56993,57332,59234,59475,59758,59939,60172,60337,61696,63235,63432,63636,70186,76302,
#Partially deleted in new
chr2	172427788	172504252	chr2:172427788-172504252	1	+	172427788	172504252	789624	26	182,125,80,256,132,117,211,194,89,119,99,62,161,144,116,190,84,80,78,103,174,99,111,99,126,162,	0,37750,39692,41336,43185,44985,46266,47140,47808,48606,51852,52201,56993,57332,59234,59475,59758,59939,60172,60337,61696,63235,63432,63636,70186,76302,
#Partially deleted in new
chr2	172427788	172504252	chr2:172427788-172504252	1	+	172427788	172504252	789624	25	182,125,80,256,117,211,194,89,119,99,62,161,144,116,190,84,80,78,103,174,99,111,99,126,162,	0,37750,39692,41336,44985,46266,47140,47808,48606,51852,52201,56993,57332,59234,59475,59758,59939,60172,60337,61696,63235,63432,63636,70186,76302,
#Partially deleted in new
chr2	172464261	172466022	chr2:172464261-172466022	3	-	172464261	172464261	8553170	2	313,199,	0,1562,
#Deleted in new
chr2	172465146	172466012	chr2:172465146-172466012	1	-	172465146	172465146	8553170	2	565,189,	0,677,
#Partially deleted in new
chr2	172468997	172474112	chr2:172468997-172474112	0	+	172468997	172468997	8553170	3	383,132,58,	0,1976,5057,
#Partially deleted in new
chr2	172480839	172556529	chr2:172480839-172556529	3	-	172480839	172480839	8553170	4	182,142,185,441,	0,14535,31494,75249,
#Partially deleted in new
chr2	172487961	172504328	chr2:172487961-172504328	0	+	172487961	172504252	789624	7	77,103,99,111,99,126,238,	0,164,3062,3259,3463,10013,16129,
#Deleted in new
chr2	172488004	172489928	chr2:172488004-172489928	0	+	172488004	172488004	8553170	3	34,103,444,	0,121,1480,
#Deleted in new
chr2	172490791	172491254	chr2:172490791-172491254	0	+	172490791	172490791	8553170	2	331,34,	0,429,
#Partially deleted in new
chr2	172490928	172501818	chr2:172490928-172501818	0	+	172490928	172490928	8553170	5	194,111,99,126,47,	0,292,496,7046,10843,
#Partially deleted in new
chr2	172503438	172556596	chr2:172503438-172556596	1	-	172503438	172503438	8553170	3	704,185,508,	0,8895,52650,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	172509028	172512510	chr2:172509028-172512510	1	-	172509028	172509028	8553170	3	266,211,177,	0,574,3305,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	172552614	172556408	chr2:172552614-172556408	0	-	172552614	172552614	8553170	2	94,320,	0,3474,
#Partially deleted in new
chr2	172555372	172565073	chr2:172555372-172565073	0	+	172558739	172565073	789624	5	347,142,72,185,96,	0,3335,6847,9130,9605,
#Deleted in new
chr2	172555425	172556407	chr2:172555425-172556407	0	-	172555425	172555425	8553170	2	155,319,	0,663,
#Partially deleted in new
chr2	172555626	172564687	chr2:172555626-172564687	0	+	172558739	172564058	789624	5	93,142,72,79,185,	0,3081,6593,8425,8876,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	172555968	172608669	chr2:172555968-172608669	3	+	172556150	172595969	0	11	378,142,72,185,96,78,77,99,111,114,12841,	0,2739,6251,8534,9009,10887,12772,14757,30309,36966,39860,
#Partially deleted in new
chr2	172556006	172595969	chr2:172556006-172595969	1	+	172556150	172595969	0	12	340,142,72,60,185,96,78,77,99,111,114,141,	0,2701,6213,6734,8496,8971,10849,12734,14719,30271,36928,39822,
#Partially deleted in new
chr2	172556050	172599137	chr2:172556050-172599137	1	+	172556150	172595969	0	12	296,142,72,185,96,78,77,99,111,114,195,1525,	0,2657,6169,8452,8927,10805,12690,14675,30227,36884,39778,41562,
#Partially deleted in new
chr2	172556101	172570820	chr2:172556101-172570820	0	+	172556150	172565062	789624	6	245,142,72,96,78,95,	0,2606,6118,8876,10754,14624,
#Partially deleted in new
chr2	172556312	172570812	chr2:172556312-172570812	0	+	172556324	172570812	789624	7	34,142,185,96,78,77,87,	0,2395,8190,8665,10543,12428,14413,
#Partially deleted in new
chr2	172556564	172565073	chr2:172556564-172565073	0	+	172558739	172565073	789624	5	63,142,72,185,96,	0,2143,5655,7938,8413,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	172558150	172558252	chr2:172558150-172558252	3	-	172558150	172558150	8553170	1	102,	0,
#Partially deleted in new
chr2	172570584	172595962	chr2:172570584-172595962	0	+	172570584	172570584	8553170	4	240,111,114,134,	0,15693,22350,25244,
#Deleted in new
chr2	172674211	172674898	chr2:172674211-172674898	7	-	172674211	172674211	16724991	1	687,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	172677140	172679027	chr2:172677140-172679027	0	-	172677140	172677140	8553170	2	442,150,	0,1737,
#Partially deleted in new
chr2	172677147	172734369	chr2:172677147-172734369	0	-	172677147	172677147	8553170	3	435,139,65,	0,1739,57157,
#Partially deleted in new
chr2	172691298	172691402	chr2:172691298-172691402	3	+	172691298	172691298	8553170	1	104,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	172723185	172736206	chr2:172723185-172736206	3	-	172723185	172723185	789624	4	4248,129,167,81,	0,11119,12109,12940,
#Partially deleted in new
chr2	172735273	172917837	chr2:172735273-172917837	0	+	172735273	172735273	8553170	5	132,143,89,147,36,	0,59751,62251,79005,182528,
#Partially deleted in new
chr2	172735840	173052887	chr2:172735840-173052887	3	+	172735983	173051767	789624	31	208,143,89,147,73,20,54,107,122,184,85,61,77,147,116,89,79,151,89,31,79,147,98,126,179,91,51,88,65,55,1248,	0,59184,61684,78438,181961,186440,224919,225281,229721,231420,247655,249592,252355,252852,254969,260625,265425,278623,280508,281333,281585,282815,284777,290731,291240,294323,298073,300284,300787,312759,315799,
#Partially deleted in new
chr2	172735966	173052893	chr2:172735966-173052893	1	+	172735983	173051767	789624	28	82,143,89,147,73,20,54,107,122,184,85,61,77,147,116,89,79,151,89,31,79,147,98,126,179,91,55,1254,	0,59058,61558,78312,181835,186314,224793,225155,229595,231294,247529,249466,252229,252726,254843,260499,265299,278497,280382,281207,281459,282689,284651,290605,291114,294197,312633,315673,
#Partially deleted in new
chr2	172744137	172814740	chr2:172744137-172814740	0	+	172744137	172744137	8553170	4	286,143,89,462,	0,50887,53387,70141,
#Partially deleted in new
chr2	172821574	173052893	chr2:172821574-173052893	1	+	172821964	173051767	789624	28	402,73,20,54,107,122,184,85,61,77,147,116,89,79,151,89,31,79,147,98,126,179,91,51,88,65,55,1254,	0,96227,100706,139185,139547,143987,145686,161921,163858,166621,167118,169235,174891,179691,192889,194774,195599,195851,197081,199043,204997,205506,208589,212339,214550,215053,227025,230065,
#Partially deleted in new
chr2	172860037	172965638	chr2:172860037-172965638	0	+	172860037	172860037	8553170	6	262,73,20,54,107,77,	0,57764,62243,100722,101084,105524,
#Partially deleted in new
chr2	172860037	173052887	chr2:172860037-173052887	1	+	172917816	173051767	789624	27	262,73,20,107,122,184,85,61,77,147,116,89,79,151,89,31,79,147,98,126,179,91,51,88,65,55,1248,	0,57764,62243,101084,105524,107223,123458,125395,128158,128655,130772,136428,141228,154426,156311,157136,157388,158618,160580,166534,167043,170126,173876,176087,176590,188562,191602,
#Partially deleted in new
chr2	172860037	173052887	chr2:172860037-173052887	1	+	172917816	173051767	789624	28	262,73,20,54,107,122,184,85,61,77,147,116,89,79,151,89,31,79,147,98,126,179,91,51,88,65,55,1248,	0,57764,62243,100722,101084,105524,107223,123458,125395,128158,128655,130772,136428,141228,154426,156311,157136,157388,158618,160580,166534,167043,170126,173876,176087,176590,188562,191602,
#Partially deleted in new
chr2	172889800	172990925	chr2:172889800-172990925	0	+	172889800	172889800	8553170	11	83,73,20,107,122,184,85,61,77,147,116,	0,28001,32480,71321,75761,77460,93695,95632,98395,98892,101009,
#Deleted in new
chr2	172893762	172894383	chr2:172893762-172894383	7	-	172893762	172893762	16724991	1	621,	0,
#Partially deleted in new
chr2	172928151	172967397	chr2:172928151-172967397	0	+	172928151	172928151	8553170	5	73,54,107,122,137,	0,32608,32970,37410,39109,
#Partially deleted in new
chr2	172928204	173052887	chr2:172928204-173052887	1	+	172961190	173051767	789624	25	142,107,122,184,85,61,77,147,116,89,79,151,89,31,79,147,98,126,179,91,51,88,65,55,1248,	0,32917,37357,39056,55291,57228,59991,60488,62605,68261,73061,86259,88144,88969,89221,90451,92413,98367,98876,101959,105709,107920,108423,120395,123435,
#Partially deleted in new
chr2	172965140	172967316	chr2:172965140-172967316	0	+	172965140	172965140	8553170	2	543,56,	0,2120,
#Partially deleted in new
chr2	172967108	172988273	chr2:172967108-172988273	0	+	172967108	172967108	8553170	4	336,85,61,78,	0,16387,18324,21087,
#Partially deleted in new
chr2	173026625	173036795	chr2:173026625-173036795	0	+	173026625	173036710	789624	6	72,179,91,51,88,168,	0,455,3538,7288,9499,10002,
#Deleted in new
chr2	173048127	173051954	chr2:173048127-173051954	0	+	173048127	173048127	8553170	2	527,315,	0,3512,
#Partially deleted in new
chr2	173075434	173222204	chr2:173075434-173222204	1	+	173091031	173221530	0	12	236,193,88,102,66,29,138,87,75,107,136,1055,	0,15563,94370,107419,112123,115460,115605,122591,128361,134294,141680,145715,
#Partially deleted in new
chr2	173075713	173266783	chr2:173075713-173266783	1	+	173091031	173266750	0	20	102,193,88,102,66,29,138,87,75,107,136,45,31,140,63,93,117,75,151,734,	0,15284,94091,107140,111844,115181,115326,122312,128082,134015,141401,153975,156478,156606,162659,163690,182985,185349,188031,190336,
#Partially deleted in new
chr2	173075835	173191172	chr2:173075835-173191172	0	+	173075835	173075835	8553170	6	167,88,102,66,29,133,	0,93969,107018,111722,115059,115204,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	173075841	173227146	chr2:173075841-173227146	1	+	173091031	173221530	0	12	161,193,88,102,66,29,138,87,75,107,136,5997,	0,15156,93963,107012,111716,115053,115198,122184,127954,133887,141273,145308,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	173075867	173212825	chr2:173075867-173212825	0	+	173075867	173075867	8553170	10	135,193,88,102,66,29,138,87,75,3097,	0,15130,93937,106986,111690,115027,115172,122158,127928,133861,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr2	173075958	173268010	chr2:173075958-173268010	3	+	173091031	173266750	0	20	44,193,88,102,66,29,138,87,75,107,136,45,31,140,63,93,117,75,151,1961,	0,15039,93846,106895,111599,114936,115081,122067,127837,133770,141156,153730,156233,156361,162414,163445,182740,185104,187786,190091,
#Partially deleted in new
chr2	173090618	173187623	chr2:173090618-173187623	0	+	173091031	173187623	789624	5	212,193,88,102,66,	0,379,79186,92235,96939,
#Partially deleted in new
chr2	173160009	173191177	chr2:173160009-173191177	0	+	173160009	173160009	8553170	6	398,88,102,66,29,138,	0,9795,22844,27548,30885,31030,
#Partially deleted in new
chr2	173166445	173207612	chr2:173166445-173207612	0	-	173166445	173166445	8553170	3	393,116,66,	0,26495,41101,
#Partially deleted in new
chr2	173166729	173271620	chr2:173166729-173271620	0	-	173166729	173166729	8553170	4	109,116,112,110,	0,26211,40817,104781,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	173197711	173282036	chr2:173197711-173282036	3	-	173197711	173197711	789624	8	1113,112,299,123,217,211,108,355,	0,9835,11935,14957,16568,17914,73799,83970,
#Partially deleted in new
chr2	173297628	173298512	chr2:173297628-173298512	7	+	173297628	173297628	16724991	1	884,	0,
#Deleted in new
chr2	173338218	173338461	chr2:173338218-173338461	5	-	173338218	173338218	16724991	1	243,	0,
#Partially deleted in new
chr2	173338339	173356208	chr2:173338339-173356208	7	-	173338339	173338339	16724991	2	294,42,	0,17827,
#Partially deleted in new
chr2	173354819	173368904	chr2:173354819-173368904	1	+	173354963	173367664	789624	9	165,126,237,78,195,141,150,137,1271,	0,3892,8406,8998,9975,10632,11463,12330,12814,
#Partially deleted in new
chr2	173354860	173368997	chr2:173354860-173368997	3	+	173354963	173367664	789624	10	124,126,237,237,78,195,141,150,137,1364,	0,3851,4394,8365,8957,9934,10591,11422,12289,12773,
#Partially deleted in new
chr2	173354871	173368070	chr2:173354871-173368070	1	+	173354963	173367664	789624	8	113,237,78,195,141,150,137,437,	0,8354,8946,9923,10580,11411,12278,12762,
#Partially deleted in new
chr2	173354871	173367720	chr2:173354871-173367720	1	+	173354963	173367664	789624	10	113,126,105,237,78,195,141,150,137,87,	0,3840,4515,8354,8946,9923,10580,11411,12278,12762,
#Partially deleted in new
chr2	173354871	173368500	chr2:173354871-173368500	0	+	173354871	173354871	8553170	8	113,126,237,1172,141,150,137,867,	0,3840,8354,8946,10580,11411,12278,12762,
#Partially deleted in new
chr2	173354887	173364873	chr2:173354887-173364873	0	+	173354963	173359366	789624	7	97,126,149,237,78,162,79,	0,3824,4455,8338,8930,9112,9907,
#Partially deleted in new
chr2	173354892	173368904	chr2:173354892-173368904	0	+	173354892	173354892	8553170	7	92,126,237,1172,141,137,1271,	0,3819,8333,8925,10559,12257,12741,
#Partially deleted in new
chr2	173358506	173365516	chr2:173358506-173365516	0	+	173358506	173358506	8553170	5	331,237,78,195,65,	0,4719,5311,6288,6945,
#Deleted in new
chr2	173431348	173431812	chr2:173431348-173431812	7	-	173431348	173431348	16724991	1	464,	0,
#Deleted in new
chr2	173477995	173478400	chr2:173477995-173478400	7	-	173477995	173477995	16724991	1	405,	0,
#Deleted in new
chr2	173485864	173486362	chr2:173485864-173486362	7	-	173485864	173485864	16724991	1	498,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	173575109	173576341	chr2:173575109-173576341	7	-	173575109	173575109	16724991	1	1232,	0,
#Deleted in new
chr2	173705947	173706148	chr2:173705947-173706148	7	-	173705947	173705947	16724991	1	201,	0,
#Deleted in new
chr2	173811075	173811392	chr2:173811075-173811392	3	+	173811075	173811075	8553170	1	317,	0,
#Deleted in new
chr2	173871652	173872465	chr2:173871652-173872465	7	-	173871652	173871652	16724991	1	813,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	173880864	173899428	chr2:173880864-173899428	3	-	173880864	173880864	8553170	4	197,166,55,38,	0,660,17110,18526,
#Partially deleted in new
chr2	173906458	173965702	chr2:173906458-173965702	3	-	173909940	173965171	789624	7	3799,197,193,1360,123,149,538,	0,6611,12134,48414,57302,57946,58706,
#Partially deleted in new
chr2	173908529	173964553	chr2:173908529-173964553	0	-	173909940	173964553	789624	5	1728,197,193,1360,149,	0,4540,10063,46343,55875,
#Partially deleted in new
chr2	173908529	173964219	chr2:173908529-173964219	1	-	173909940	173963835	789624	5	1728,197,193,1360,459,	0,4540,10063,46343,55231,
#Partially deleted in new
chr2	173908531	173916832	chr2:173908531-173916832	0	-	173908531	173908531	8553170	2	1726,3763,	0,4538,
#Partially deleted in new
chr2	173909940	173963835	chr2:173909940-173963835	1	-	173909940	173963835	789624	5	317,197,193,1360,75,	0,3129,8652,44932,53820,
#Partially deleted in new
chr2	173955816	173965310	chr2:173955816-173965310	0	-	173955816	173955816	8553170	2	412,123,	0,9371,
#Partially deleted in new
chr2	173956073	173963379	chr2:173956073-173963379	0	-	173956073	173956073	8553170	2	159,408,	0,6898,
#Partially deleted in new
chr2	173956080	173964885	chr2:173956080-173964885	0	-	173956080	173956080	8553170	4	152,123,149,35,	0,7680,8324,8770,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	173968350	173969418	chr2:173968350-173969418	3	+	173968350	173968350	8553170	1	1068,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	174011855	174012975	chr2:174011855-174012975	3	-	174011855	174011855	8553170	2	261,97,	0,1023,
#Deleted in new
chr2	174025279	174027163	chr2:174025279-174027163	3	+	174025279	174025279	789624	1	1884,	0,
#Deleted in new
chr2	174043007	174043880	chr2:174043007-174043880	7	+	174043007	174043007	16724991	1	873,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	174072446	174248698	chr2:174072446-174248698	3	-	174075425	174246815	0	11	3081,123,97,141,98,81,176,128,144,101,247,	0,6521,8705,9477,50733,51148,69378,150586,156861,174268,176005,
#Partially deleted in new
chr2	174075007	174248599	chr2:174075007-174248599	1	-	174075425	174141899	0	10	520,123,97,141,98,81,176,128,144,148,	0,3960,6144,6916,48172,48587,66817,148025,154300,173444,
#Partially deleted in new
chr2	174075009	174248475	chr2:174075009-174248475	1	-	174075418	174246815	0	8	518,98,81,176,128,144,101,24,	0,48170,48585,66815,148023,154298,171705,173442,
#Deleted in new
chr2	174075189	174079351	chr2:174075189-174079351	0	-	174075189	174075189	8553170	2	338,384,	0,3778,
#Partially deleted in new
chr2	174075236	174248360	chr2:174075236-174248360	1	-	174075425	174247729	789624	11	291,123,97,141,98,81,176,128,144,101,691,	0,3731,5915,6687,47943,48358,66588,147796,154071,171478,172433,
#Partially deleted in new
chr2	174075408	174124315	chr2:174075408-174124315	0	-	174075408	174075408	8553170	7	119,123,97,141,98,81,52,	0,3559,5743,6515,47771,48186,48855,
#Partially deleted in new
chr2	174080907	174123670	chr2:174080907-174123670	0	-	174080907	174080907	8553170	4	341,141,98,76,	0,1016,42272,42687,
#Partially deleted in new
chr2	174082009	174217946	chr2:174082009-174217946	0	-	174082009	174141899	789624	5	55,98,81,176,75,	0,41170,41585,59815,135862,
#Deleted in new
chr2	174171890	174172725	chr2:174171890-174172725	7	+	174171890	174171890	16724991	1	835,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	174223056	174247287	chr2:174223056-174247287	0	-	174223056	174246815	789624	4	104,144,101,360,	0,6251,23658,23871,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	174240142	174240457	chr2:174240142-174240457	3	-	174240142	174240142	8553170	1	315,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	174264877	174264981	chr2:174264877-174264981	3	-	174264877	174264877	8553170	1	104,	0,
#Partially deleted in new
chr2	174299323	174300956	chr2:174299323-174300956	7	-	174299323	174299323	16724991	2	84,957,	0,676,
#Deleted in new
chr2	174310014	174310974	chr2:174310014-174310974	7	-	174310014	174310014	16724991	1	960,	0,
#Deleted in new
chr2	174326026	174330643	chr2:174326026-174330643	3	+	174326026	174326026	789624	3	1384,380,1359,	0,2430,3258,
#Deleted in new
chr2	174328771	174330542	chr2:174328771-174330542	0	+	174328771	174328771	8553170	2	65,1570,	0,201,
#Deleted in new
chr2	174334437	174337566	chr2:174334437-174337566	3	-	174334437	174334437	8553170	1	3129,	0,
#Deleted in new
chr2	174334945	174338492	chr2:174334945-174338492	3	+	174335092	174337540	789624	2	168,2386,	0,1161,
#Partially deleted in new
chr2	174348021	174395715	chr2:174348021-174395715	3	-	174348496	174395622	789624	10	1151,86,107,118,49,65,11,74,95,165,	0,2638,3597,30901,32180,32629,32782,33682,39663,47529,
#Partially deleted in new
chr2	174349134	174351963	chr2:174349134-174351963	0	-	174349134	174349134	8553170	3	38,86,345,	0,1525,2484,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	174358172	174380680	chr2:174358172-174380680	0	-	174358444	174380680	789624	4	364,118,49,30,	0,20750,22029,22478,
#Partially deleted in new
chr2	174378686	174395706	chr2:174378686-174395706	0	-	174378686	174378686	8553170	7	354,49,65,11,74,95,156,	0,1515,1964,2117,3017,8998,16864,
#Partially deleted in new
chr2	174387262	174395709	chr2:174387262-174395709	0	-	174387262	174387262	8553170	2	517,159,	0,8288,
#Partially deleted in new
chr2	174395729	174427864	chr2:174395729-174427864	0	+	174398283	174404115	789624	7	88,168,182,213,163,175,152,	0,2545,4192,8373,27155,28745,31983,
#Partially deleted in new
chr2	174395729	174428317	chr2:174395729-174428317	0	+	174398283	174404115	789624	7	88,168,182,213,163,175,605,	0,2545,4192,8373,27155,28745,31983,
#Partially deleted in new
chr2	174395740	174404210	chr2:174395740-174404210	0	+	174398283	174404210	789624	6	77,69,168,182,200,108,	0,1595,2534,4181,5249,8362,
#Partially deleted in new
chr2	174395742	174424570	chr2:174395742-174424570	0	+	174395742	174395742	8553170	6	75,182,200,213,163,96,	0,4179,5247,8360,27142,28732,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	174395744	174429575	chr2:174395744-174429575	3	+	174398283	174427895	789624	8	73,168,182,200,213,163,175,1863,	0,2530,4177,5245,8358,27140,28730,31968,
#Partially deleted in new
chr2	174395744	174428417	chr2:174395744-174428417	1	+	174395756	174427895	789624	8	73,77,182,200,213,163,175,705,	0,2621,4177,5245,8358,27140,28730,31968,
#Partially deleted in new
chr2	174395751	174398314	chr2:174395751-174398314	0	+	174398283	174398314	789624	2	542,40,	0,2523,
#Partially deleted in new
chr2	174395791	174400103	chr2:174395791-174400103	0	+	174398283	174400103	789624	3	198,168,182,	0,2483,4130,
#Partially deleted in new
chr2	174395794	174397404	chr2:174395794-174397404	0	+	174395794	174395794	8553170	2	499,69,	0,1541,
#Partially deleted in new
chr2	174395807	174401054	chr2:174395807-174401054	0	+	174398283	174401054	789624	4	424,168,182,65,	0,2467,4114,5182,
#Partially deleted in new
chr2	174398194	174404190	chr2:174398194-174404190	0	+	174398283	174404190	789624	4	248,182,200,88,	0,1727,2795,5908,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	174410081	174427895	chr2:174410081-174427895	0	+	174410081	174410081	8553170	4	422,163,175,183,	0,12803,14393,17631,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	174410343	174428035	chr2:174410343-174428035	0	+	174410343	174410343	8553170	3	160,175,323,	0,14131,17369,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	174431570	174487088	chr2:174431570-174487088	1	-	174436115	174481956	789624	15	4846,138,65,96,137,105,211,91,85,118,156,166,400,491,216,	0,8327,10548,13510,15040,22166,28307,29831,30017,34214,37341,38819,41394,49926,55302,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	174432237	174487080	chr2:174432237-174487080	3	-	174436115	174481956	789624	16	4179,138,65,96,137,105,211,91,85,118,84,156,166,400,491,208,	0,7660,9881,12843,14373,21499,27640,29164,29350,33547,34306,36674,38152,40727,49259,54635,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	174434151	174487094	chr2:174434151-174487094	1	-	174436115	174481956	789624	17	2265,138,65,96,137,105,211,91,85,118,84,156,166,400,491,46,222,	0,5746,7967,10929,12459,19585,25726,27250,27436,31633,32392,34760,36238,38813,47345,48721,52721,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	174435143	174487037	chr2:174435143-174487037	1	-	174436115	174481956	789624	17	1273,138,65,96,137,105,211,91,85,118,84,156,166,400,491,149,165,	0,4754,6975,9937,11467,18593,24734,26258,26444,30641,31400,33768,35246,37821,46353,47866,51729,
#Partially deleted in new
chr2	174436305	174445422	chr2:174436305-174445422	0	-	174436305	174436305	8553170	5	111,138,65,96,163,	0,3592,5813,8775,8954,
#Partially deleted in new
chr2	174482872	174487000	chr2:174482872-174487000	0	-	174482872	174482872	8553170	3	46,149,128,	0,137,4000,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	174487511	174488386	chr2:174487511-174488386	3	+	174487511	174487511	8553170	2	147,352,	0,523,
#Partially deleted in new
chr2	174501951	174502312	chr2:174501951-174502312	7	+	174501951	174501951	16724991	1	361,	0,
#Deleted in new
chr2	174545384	174546335	chr2:174545384-174546335	3	-	174545384	174545384	8553170	1	951,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	174547140	174774827	chr2:174547140-174774827	3	+	174547140	174547140	8553170	4	108,109,104,2079,	0,228,182580,225608,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	174547373	174665689	chr2:174547373-174665689	1	+	174547373	174547373	8553170	3	104,788,513,	0,108124,117803,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	174559571	174634579	chr2:174559571-174634579	1	-	174562546	174585573	0	8	3031,114,213,771,177,130,89,62,	0,7498,8289,12104,15632,21738,25951,74946,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	174560769	174682899	chr2:174560769-174682899	1	-	174562100	174585573	0	9	1356,52,114,213,771,177,130,89,126,	0,1781,6300,7091,10906,14434,20540,24753,122004,
#Partially deleted in new
chr2	174562203	174682883	chr2:174562203-174682883	3	-	174562546	174585573	0	8	399,114,213,771,177,130,89,110,	0,4866,5657,9472,13000,19106,23319,120570,
#Partially deleted in new
chr2	174562210	174598206	chr2:174562210-174598206	1	-	174562546	174585573	0	9	392,114,213,771,177,130,89,258,36,	0,4859,5650,9465,12993,19099,23312,35390,35960,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	174566160	174597765	chr2:174566160-174597765	1	-	174567043	174585573	0	7	1023,213,771,177,130,89,165,	0,1700,5515,9043,15149,19362,31440,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	174567076	174570646	chr2:174567076-174570646	0	-	174567076	174567076	8553170	4	107,213,217,208,	0,784,1530,3362,
#Partially deleted in new
chr2	174571168	174682871	chr2:174571168-174682871	1	-	174571592	174585573	789624	5	1278,177,130,89,98,	0,4035,10141,14354,111605,
#Partially deleted in new
chr2	174572323	174585589	chr2:174572323-174585589	0	-	174572323	174585573	789624	4	123,168,130,67,	0,2880,8986,13199,
#Partially deleted in new
chr2	174574729	174597769	chr2:174574729-174597769	1	-	174574903	174585573	789624	5	212,177,130,89,169,	0,474,6580,10793,22871,
#Partially deleted in new
chr2	174575226	174587726	chr2:174575226-174587726	3	+	174575226	174575226	8553170	2	203,254,	0,12246,
#Partially deleted in new
chr2	174575262	174598211	chr2:174575262-174598211	0	-	174575262	174585573	789624	4	118,130,89,36,	0,6047,10260,22913,
#Partially deleted in new
chr2	174581139	174597804	chr2:174581139-174597804	0	-	174581139	174581139	8553170	3	300,89,204,	0,4383,16461,
#Partially deleted in new
chr2	174623480	174634605	chr2:174623480-174634605	0	-	174623480	174623480	8553170	5	28,140,203,179,88,	0,2340,6185,6901,11037,
#Partially deleted in new
chr2	174625623	174630429	chr2:174625623-174630429	0	-	174625623	174625623	8553170	3	337,203,48,	0,4042,4758,
#Partially deleted in new
chr2	174625709	174634536	chr2:174625709-174634536	0	-	174625709	174625709	8553170	4	251,203,315,19,	0,3956,4672,8808,
#Partially deleted in new
chr2	174625856	174634579	chr2:174625856-174634579	0	-	174625856	174625856	8553170	4	104,203,244,62,	0,3809,4525,8661,
#Partially deleted in new
chr2	174673266	174682847	chr2:174673266-174682847	0	-	174673266	174673266	8553170	2	550,74,	0,9507,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	174676336	174682916	chr2:174676336-174682916	0	-	174676336	174676336	8553170	3	330,80,143,	0,708,6437,
#Deleted in new
chr2	174719907	174720318	chr2:174719907-174720318	7	+	174719907	174719907	16724991	1	411,	0,
#Partially deleted in new
chr2	174747591	174764472	chr2:174747591-174764472	3	-	174748123	174764394	0	9	664,240,224,238,196,110,45,146,121,	0,988,2354,5911,6627,9974,11739,11896,16760,
#Partially deleted in new
chr2	174747659	174764461	chr2:174747659-174764461	1	-	174748123	174764394	0	10	596,240,224,238,196,110,75,45,146,110,	0,920,2286,5843,6559,9906,10286,11671,11828,16692,
#Partially deleted in new
chr2	174747809	174764412	chr2:174747809-174764412	1	-	174748123	174764394	789624	8	446,224,238,196,110,45,146,61,	0,2136,5693,6409,9756,11521,11678,16542,
#Partially deleted in new
chr2	174747809	174764412	chr2:174747809-174764412	1	-	174748123	174764394	789624	8	446,240,224,238,60,45,146,61,	0,770,2136,5693,6409,11521,11678,16542,
#Partially deleted in new
chr2	174747809	174764412	chr2:174747809-174764412	0	-	174754402	174764394	789624	8	446,240,224,238,196,45,146,61,	0,770,2136,5693,6409,11521,11678,16542,
#Partially deleted in new
chr2	174747816	174787935	chr2:174747816-174787935	1	-	174748123	174776186	789624	10	439,240,224,238,196,110,45,146,162,62,	0,763,2129,5686,6402,9749,11514,11671,28288,40057,
#Partially deleted in new
chr2	174752754	174764453	chr2:174752754-174764453	1	-	174753470	174764394	789624	6	986,196,110,45,146,102,	0,1464,4811,6576,6733,11597,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	174783045	174787928	chr2:174783045-174787928	0	-	174783045	174783045	8553170	2	1824,55,	0,4828,
#Partially deleted in new
chr2	174799362	175005226	chr2:174799362-175005226	3	-	174800115	175004912	0	13	925,106,138,78,174,85,78,289,114,32,56,39,333,	0,2344,9542,12148,12946,25071,47517,78477,115695,119171,145525,152801,205531,
#Partially deleted in new
chr2	174799491	174847549	chr2:174799491-174847549	1	-	174800115	174847131	0	7	796,106,138,78,174,85,670,	0,2215,9413,12019,12817,24942,47388,
#Partially deleted in new
chr2	174799494	175005364	chr2:174799494-175005364	0	-	174799494	174799494	789624	12	793,106,138,78,174,85,78,114,32,56,39,159,	0,2212,9410,12016,12814,24939,47385,115563,119039,145393,152669,205711,
#Partially deleted in new
chr2	174799514	174846405	chr2:174799514-174846405	1	-	174800115	174846389	789624	7	773,106,138,78,174,85,91,	0,2192,9390,11996,12794,24919,46800,
#Deleted in new
chr2	174799896	174802057	chr2:174799896-174802057	0	-	174799896	174799896	8553170	2	391,351,	0,1810,
#Partially deleted in new
chr2	174799988	175005369	chr2:174799988-175005369	1	-	174800115	175004912	0	13	299,106,138,78,174,85,289,114,32,56,39,187,164,	0,1718,8916,11522,12320,24445,77851,115069,118545,144899,152175,204905,205217,
#Partially deleted in new
chr2	174801720	174847565	chr2:174801720-174847565	0	-	174801720	174824470	789624	7	92,138,78,174,85,78,253,	0,7184,9790,10588,22713,45159,45592,
#Partially deleted in new
chr2	174808904	174846415	chr2:174808904-174846415	0	-	174808904	174846389	789624	5	138,78,174,85,107,	0,2606,3404,15529,37404,
#Partially deleted in new
chr2	174808926	174847751	chr2:174808926-174847751	0	-	174808926	174847745	789624	6	116,78,174,85,78,33,	0,2584,3382,15507,37953,38792,
#Deleted in new
chr2	174810899	174812353	chr2:174810899-174812353	0	-	174810899	174810899	8553170	2	689,45,	0,1409,
#Partially deleted in new
chr2	174811532	175005345	chr2:174811532-175005345	0	-	174915157	175004912	789624	8	56,174,85,78,114,39,187,140,	0,776,12901,35347,103525,140631,193361,193673,
#Partially deleted in new
chr2	174812097	174846965	chr2:174812097-174846965	0	-	174812097	174812097	8553170	3	385,85,86,	0,12336,34782,
#Partially deleted in new
chr2	174837112	174877941	chr2:174837112-174877941	0	-	174837112	174837112	8553170	4	224,78,78,102,	0,9767,38675,40727,
#Partially deleted in new
chr2	174846913	174915292	chr2:174846913-174915292	0	-	174846913	174846913	8553170	3	44,289,235,	0,30926,68144,
#Partially deleted in new
chr2	174877909	175005219	chr2:174877909-175005219	0	-	174877909	174877909	8553170	3	219,39,326,	0,74254,126984,
#Partially deleted in new
chr2	174915066	175005263	chr2:174915066-175005263	0	-	174945250	175004912	789624	7	105,32,56,92,39,187,58,	0,3467,29821,30103,37097,89827,90139,
#Deleted in new
chr2	175022213	175022319	chr2:175022213-175022319	3	+	175022213	175022213	8553170	1	106,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	175029768	175029877	chr2:175029768-175029877	3	+	175029768	175029768	8553170	1	109,	0,
#Deleted in new
chr2	175033777	175034192	chr2:175033777-175034192	7	-	175033777	175033777	16724991	1	415,	0,
#Partially deleted in new
chr2	175072249	175168206	chr2:175072249-175168206	3	-	175074608	175136443	0	14	2586,106,207,150,87,115,179,129,119,97,70,75,99,157,	0,8410,20811,25194,39318,41744,42440,45740,46001,49194,57888,64162,78810,95800,
#Partially deleted in new
chr2	175072249	175168206	chr2:175072249-175168206	1	-	175074608	175130162	0	13	2586,106,207,150,87,115,179,129,119,70,75,99,157,	0,8410,20811,25194,39318,41744,42440,45740,46001,57888,64162,78810,95800,
#Partially deleted in new
chr2	175072253	175168206	chr2:175072253-175168206	1	-	175074608	175130185	0	14	2582,106,207,150,87,115,179,129,119,97,70,35,99,157,	0,8406,20807,25190,39314,41740,42436,45736,45997,49190,57884,75692,78806,95796,
#Partially deleted in new
chr2	175072264	175151082	chr2:175072264-175151082	1	-	175074608	175130185	789624	12	2571,106,207,150,87,129,119,97,70,63,75,23,	0,8395,20796,25179,39303,45725,45986,49179,57873,60430,64147,78795,
#Partially deleted in new
chr2	175074279	175168203	chr2:175074279-175168203	1	-	175074608	175130162	0	14	556,106,207,150,87,115,179,129,119,70,63,75,99,154,	0,6380,18781,23164,37288,39714,40410,43710,43971,55858,58415,62132,76780,93770,
#Partially deleted in new
chr2	175074287	175114812	chr2:175074287-175114812	1	-	175074608	175114798	789624	10	548,106,207,150,87,115,77,3,15,17,	0,6372,18773,23156,37280,39706,40402,40484,40492,40508,
#Partially deleted in new
chr2	175074391	175130205	chr2:175074391-175130205	0	-	175074709	175130205	789624	7	444,207,51,129,119,97,68,	0,18669,40426,43598,43859,47052,55746,
#Partially deleted in new
chr2	175074504	175168169	chr2:175074504-175168169	1	-	175074608	175136443	0	15	331,106,207,150,87,115,179,129,119,97,70,75,35,99,120,	0,6155,18556,22939,37063,39489,40185,43485,43746,46939,55633,61907,73441,76555,93545,
#Partially deleted in new
chr2	175074504	175168169	chr2:175074504-175168169	1	-	175074608	175136443	0	6	331,106,70,75,99,120,	0,6155,55633,61907,76555,93545,
#Partially deleted in new
chr2	175080262	175093254	chr2:175080262-175093254	0	-	175080262	175080262	8553170	2	503,194,	0,12798,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	175092400	175092587	chr2:175092400-175092587	3	-	175092400	175092400	8553170	1	187,	0,
#Partially deleted in new
chr2	175111646	175168168	chr2:175111646-175168168	0	-	175118339	175136443	789624	8	8,115,179,119,70,75,99,119,	0,2347,3043,6604,18491,24765,39413,56403,
#Partially deleted in new
chr2	175113993	175168382	chr2:175113993-175168382	0	-	175113993	175130162	789624	8	115,179,129,119,70,75,99,97,	0,696,3996,4257,16144,22418,37066,54292,
#Partially deleted in new
chr2	175114242	175168169	chr2:175114242-175168169	1	-	175114685	175136443	0	8	626,129,119,97,70,75,99,120,	0,3747,4008,7201,15895,22169,36817,53807,
#Deleted in new
chr2	175167632	175167709	chr2:175167632-175167709	3	-	175167632	175167632	5263520	1	77,	0,
#Deleted in new
chr2	175167903	175168522	chr2:175167903-175168522	3	+	175167903	175167903	8553170	2	32,465,	0,154,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	175176257	175184607	chr2:175176257-175184607	3	-	175178287	175181393	789624	5	2145,194,81,112,2952,	0,2799,3840,5097,5398,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	175176492	175176586	chr2:175176492-175176586	3	-	175176492	175176492	8553170	1	94,	0,
#Partially deleted in new
chr2	175178066	175181710	chr2:175178066-175181710	1	-	175178287	175181393	789624	5	336,194,81,129,55,	0,990,2031,3288,3589,
#Partially deleted in new
chr2	175178144	175181663	chr2:175178144-175181663	1	-	175178287	175181393	789624	4	258,194,81,309,	0,912,1953,3210,
#Partially deleted in new
chr2	175178185	175181710	chr2:175178185-175181710	0	-	175178185	175178185	8553170	4	1065,81,112,55,	0,1912,3169,3470,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	175179644	175181695	chr2:175179644-175181695	0	-	175179644	175179644	8553170	3	534,112,40,	0,1710,2011,
#Deleted in new
chr2	175184214	175184607	chr2:175184214-175184607	7	+	175184214	175184214	16724991	1	393,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	175257249	175454640	chr2:175257249-175454640	3	+	175257249	175257249	8553170	3	339,109,33,	0,34143,197358,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	175257341	175442968	chr2:175257341-175442968	1	+	175257341	175257341	8553170	2	247,521,	0,185106,
#Deleted in new
chr2	175842886	175843302	chr2:175842886-175843302	7	+	175842886	175842886	16724991	1	416,	0,
#Partially deleted in new
chr2	175904370	175905502	chr2:175904370-175905502	3	-	175904370	175904370	8553170	2	248,58,	0,1074,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	175923891	176002345	chr2:175923891-176002345	3	-	175929966	175995584	789624	13	6308,171,71,106,213,52,84,41,59,188,42,89,186,	0,13452,14421,15660,23588,40480,40614,46872,55918,68339,69290,71666,78268,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	175923896	176002294	chr2:175923896-176002294	1	-	175929966	175995584	789624	14	6303,171,71,106,93,213,52,84,41,59,188,42,89,135,	0,13447,14416,15655,17091,23583,40475,40609,46867,55913,68334,69285,71661,78263,
#Partially deleted in new
chr2	175929172	176002274	chr2:175929172-176002274	0	-	175929966	175964577	789624	11	1027,171,71,106,213,52,84,41,59,89,115,	0,8171,9140,10379,18307,35199,35333,41591,50637,66385,72987,
#Partially deleted in new
chr2	175929938	175937856	chr2:175929938-175937856	0	-	175929938	175929938	8553170	2	261,513,	0,7405,
#Partially deleted in new
chr2	175929945	175938336	chr2:175929945-175938336	0	-	175929945	175929945	8553170	4	254,75,171,24,	0,2142,7398,8367,
#Partially deleted in new
chr2	175929968	175947510	chr2:175929968-175947510	0	-	175937441	175947510	789624	4	231,171,106,31,	0,7375,9583,17511,
#Deleted in new
chr2	175937467	175938807	chr2:175937467-175938807	0	-	175937467	175937467	8553170	2	47,495,	0,845,
#Deleted in new
chr2	175937477	175939754	chr2:175937477-175939754	0	-	175937477	175937477	8553170	3	37,71,203,	0,835,2074,
#Partially deleted in new
chr2	175970763	176002263	chr2:175970763-176002263	0	-	175970763	175995564	789624	6	41,59,188,42,94,104,	0,9046,21467,22418,24789,31396,
#Partially deleted in new
chr2	175992230	176002279	chr2:175992230-176002279	0	-	175992230	175992230	8553170	3	43,89,120,	0,3327,9929,
#Partially deleted in new
chr2	175992238	176002839	chr2:175992238-176002839	0	-	175992238	175995584	789624	4	180,42,89,328,	0,943,3319,10273,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	175993180	176002786	chr2:175993180-176002786	0	-	175993180	175993180	8553170	4	43,147,89,275,	0,953,2377,9331,
#Deleted in new
chr2	176077471	176083913	chr2:176077471-176083913	3	-	176080106	176083776	789624	3	3367,272,564,	0,4706,5878,
#Deleted in new
chr2	176092890	176095938	chr2:176092890-176095938	3	+	176092890	176094730	789624	2	781,1459,	0,1589,
#Deleted in new
chr2	176099729	176101193	chr2:176099729-176101193	3	+	176099801	176100760	789624	2	646,672,	0,792,
#Deleted in new
chr2	176099801	176100760	chr2:176099801-176100760	1	+	176099801	176100660	789624	2	602,239,	0,720,
#Deleted in new
chr2	176104215	176109754	chr2:176104215-176109754	2	+	176104215	176104215	8553170	2	411,848,	0,4691,
#Deleted in new
chr2	176107285	176109588	chr2:176107285-176109588	1	+	176107355	176109142	789624	2	851,682,	0,1621,
#Deleted in new
chr2	176108789	176119394	chr2:176108789-176119394	0	+	176108789	176108789	8553170	2	569,441,	0,10164,
#Deleted in new
chr2	176108876	176119243	chr2:176108876-176119243	0	+	176108876	176108876	8553170	3	482,134,290,	0,2506,10077,
#Deleted in new
chr2	176116578	176119942	chr2:176116578-176119942	3	+	176116833	176119231	789624	2	1000,989,	0,2375,
#Deleted in new
chr2	176121610	176137013	chr2:176121610-176137013	3	-	176121610	176121610	8553170	4	77,425,104,393,	0,409,13708,15010,
#Deleted in new
chr2	176122719	176124937	chr2:176122719-176124937	3	+	176122768	176124175	789624	2	866,1004,	0,1214,
#Deleted in new
chr2	176129693	176132695	chr2:176129693-176132695	1	+	176130918	176131612	789624	3	81,148,1379,	0,1102,1623,
#Deleted in new
chr2	176129739	176132029	chr2:176129739-176132029	3	+	176130366	176131612	789624	2	1204,713,	0,1577,
#Deleted in new
chr2	176130021	176132100	chr2:176130021-176132100	1	+	176130366	176131612	789624	4	146,157,148,784,	0,305,774,1295,
#Deleted in new
chr2	176130356	176132000	chr2:176130356-176132000	1	+	176130366	176131612	789624	2	587,681,	0,963,
#Deleted in new
chr2	176134605	176137098	chr2:176134605-176137098	1	-	176134605	176134605	789624	3	345,104,478,	0,713,2015,
#Deleted in new
chr2	176136611	176139663	chr2:176136611-176139663	0	+	176136611	176136611	8553170	2	388,667,	0,2385,
#Partially deleted in new
chr2	176136956	176169415	chr2:176136956-176169415	0	+	176169114	176169415	789624	2	43,385,	0,32074,
#Deleted in new
chr2	176150302	176150412	chr2:176150302-176150412	3	+	176150302	176150302	5263520	1	110,	0,
#Partially deleted in new
chr2	176151084	176173097	chr2:176151084-176173097	3	+	176151633	176152712	789624	4	982,333,625,1581,	0,1620,17946,20432,
#Deleted in new
chr2	176151221	176153226	chr2:176151221-176153226	3	+	176151633	176152942	789624	2	845,619,	0,1386,
#Partially deleted in new
chr2	176160890	176173085	chr2:176160890-176173085	3	+	176169114	176172274	789624	3	190,625,1569,	0,8140,10626,
#Partially deleted in new
chr2	176164050	176178099	chr2:176164050-176178099	0	-	176164050	176164050	8553170	4	59,158,163,85,	0,12484,13281,13964,
#Partially deleted in new
chr2	176164076	176173102	chr2:176164076-176173102	1	+	176169114	176172274	789624	3	92,625,1586,	0,4954,7440,
#Deleted in new
chr2	176164163	176165716	chr2:176164163-176165716	3	-	176164163	176164163	8553170	1	1553,	0,
#Partially deleted in new
chr2	176173001	176188531	chr2:176173001-176188531	3	-	176173001	176173001	789624	5	3691,163,146,70,113,	0,4330,4709,6027,15417,
#Partially deleted in new
chr2	176173188	176178129	chr2:176173188-176178129	0	-	176173188	176173188	789624	3	3504,163,419,	0,4143,4522,
#Partially deleted in new
chr2	176173232	176188546	chr2:176173232-176188546	0	-	176173232	176173232	789624	4	3460,163,70,128,	0,4099,5796,15186,
#Partially deleted in new
chr2	176173261	176188591	chr2:176173261-176188591	0	-	176173261	176173261	789624	3	3431,163,173,	0,4070,15157,
#Partially deleted in new
chr2	176173673	176188958	chr2:176173673-176188958	0	-	176173673	176173673	789624	3	3019,163,145,	0,3658,15140,
#Partially deleted in new
chr2	176175772	176188546	chr2:176175772-176188546	0	-	176175772	176175772	8553170	5	920,41,163,70,128,	0,1126,1559,3256,12646,
#Partially deleted in new
chr2	176176185	176188269	chr2:176176185-176188269	0	-	176176185	176176185	789624	4	507,163,70,205,	0,1146,2843,11879,
#Partially deleted in new
chr2	176176379	176178084	chr2:176176379-176178084	0	-	176176379	176176379	8553170	3	313,163,82,	0,952,1623,
#Partially deleted in new
chr2	176176385	176178125	chr2:176176385-176178125	0	-	176176385	176176385	8553170	3	307,163,111,	0,946,1629,
#Partially deleted in new
chr2	176176385	176178042	chr2:176176385-176178042	0	-	176176385	176176385	8553170	4	307,163,111,28,	0,946,1325,1629,
#Partially deleted in new
chr2	176176471	176178125	chr2:176176471-176178125	0	-	176176471	176176471	8553170	2	221,415,	0,1239,
#Partially deleted in new
chr2	176176471	176178083	chr2:176176471-176178083	0	-	176176471	176176471	8553170	4	221,163,111,81,	0,860,1239,1531,
#Partially deleted in new
chr2	176176475	176177568	chr2:176176475-176177568	0	-	176176475	176176475	8553170	2	217,237,	0,856,
#Partially deleted in new
chr2	176176479	176188479	chr2:176176479-176188479	0	-	176176479	176176479	8553170	5	213,163,116,70,61,	0,852,1231,2549,11939,
#Deleted in new
chr2	176177716	176179008	chr2:176177716-176179008	3	+	176177716	176177716	8553170	2	537,584,	0,708,
#Deleted in new
chr2	176188578	176190907	chr2:176188578-176190907	3	+	176188801	176190142	789624	2	875,1100,	0,1229,
#Deleted in new
chr2	176188842	176188901	chr2:176188842-176188901	3	+	176188842	176188842	5263520	1	59,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	176189918	176192538	chr2:176189918-176192538	3	-	176189918	176189918	8553170	1	2620,	0,
#Partially deleted in new
chr2	176200907	176201252	chr2:176200907-176201252	7	-	176200907	176200907	16724991	1	345,	0,
#Deleted in new
chr2	176242110	176242993	chr2:176242110-176242993	7	+	176242110	176242110	16724991	1	883,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	176269394	176338025	chr2:176269394-176338025	0	+	176269629	176270289	789624	11	275,204,48,47,73,77,93,39,126,77,533,	0,821,27465,28454,53997,57430,58898,59479,59906,61189,68098,
#Partially deleted in new
chr2	176269418	176338025	chr2:176269418-176338025	3	+	176269629	176337664	789624	10	251,48,47,73,77,93,39,126,77,533,	0,27441,28430,53973,57406,58874,59455,59882,61165,68074,
#Partially deleted in new
chr2	176269451	176328322	chr2:176269451-176328322	0	+	176269629	176304243	789624	7	218,48,47,125,73,77,30,	0,27408,28397,34789,53940,57373,58841,
#Partially deleted in new
chr2	176269469	176337679	chr2:176269469-176337679	1	+	176269629	176337664	789624	7	200,77,93,39,126,77,187,	0,57355,58823,59404,59831,61114,68023,
#Partially deleted in new
chr2	176269501	176337630	chr2:176269501-176337630	0	+	176269629	176337630	789624	10	168,48,47,73,77,93,39,57,77,138,	0,27358,28347,53890,57323,58791,59372,59868,61082,67991,
#Deleted in new
chr2	176338636	176339077	chr2:176338636-176339077	7	+	176338636	176338636	16724991	1	441,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	176506244	176507702	chr2:176506244-176507702	3	-	176506244	176506244	8553170	2	292,203,	0,1255,
#Partially deleted in new
chr2	176524878	176531683	chr2:176524878-176531683	3	-	176524878	176524878	8553170	4	481,63,184,94,	0,2812,5766,6711,
#Partially deleted in new
chr2	176600979	176601052	chr2:176600979-176601052	3	-	176600979	176600979	5263520	1	73,	0,
#Partially deleted in new
chr2	176611436	176612249	chr2:176611436-176612249	3	-	176611436	176611436	8553170	1	813,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	176629588	176637931	chr2:176629588-176637931	3	-	176629588	176629588	789624	3	844,93,470,	0,3444,7873,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	176630164	176637562	chr2:176630164-176637562	1	-	176630164	176630164	8553170	4	268,93,376,101,	0,2868,3200,7297,
#Partially deleted in new
chr2	176637709	176655958	chr2:176637709-176655958	3	+	176637709	176637709	789624	4	298,83,57,261,	0,1781,17754,17988,
#Deleted in new
chr2	176664675	176664766	chr2:176664675-176664766	3	+	176664675	176664675	8553170	1	91,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	176724267	176766111	chr2:176724267-176766111	1	-	176724267	176724267	8553170	4	188,60,239,45,	0,33052,37192,41799,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	176753399	176819250	chr2:176753399-176819250	0	-	176753399	176753399	8553170	6	183,4239,37,78,122,14,	0,3920,8262,39167,58672,65837,
#Deleted in new
chr2	176761236	176762616	chr2:176761236-176762616	1	-	176761236	176761236	8553170	2	462,117,	0,1263,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	176761407	176819310	chr2:176761407-176819310	3	-	176761407	176761407	8553170	6	151,37,104,78,122,74,	0,254,21408,31159,50664,57829,
#Deleted in new
chr2	176804986	176806337	chr2:176804986-176806337	7	-	176804986	176804986	16724991	1	1351,	0,
#Deleted in new
chr2	176809425	176809859	chr2:176809425-176809859	7	-	176809425	176809425	16724991	1	434,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	176822029	176823653	chr2:176822029-176823653	3	+	176822029	176822029	8553170	1	1624,	0,
#Deleted in new
chr2	176845992	176849428	chr2:176845992-176849428	0	-	176845992	176845992	8553170	2	385,178,	0,3258,
#Deleted in new
chr2	176846055	176849403	chr2:176846055-176849403	3	-	176846055	176846055	8553170	3	322,83,153,	0,2519,3195,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	176990507	177056316	chr2:176990507-177056316	1	-	176990507	176990507	8553170	3	358,141,45,	0,2318,65764,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	177138698	177138797	chr2:177138698-177138797	7	+	177138698	177138698	16724991	1	99,	0,
#Partially deleted in new
chr2	177155621	177212662	chr2:177155621-177212662	3	-	177155621	177155621	8553170	2	52,166,	0,56875,
#Partially deleted in new
chr2	177177694	177178255	chr2:177177694-177178255	7	+	177177694	177177694	16724991	1	561,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	177194982	177195095	chr2:177194982-177195095	3	+	177194982	177194982	8553170	1	113,	0,
#Partially deleted in new
chr2	177197984	177198547	chr2:177197984-177198547	7	+	177197984	177197984	16724991	1	563,	0,
#Partially deleted in new
chr2	177212562	177220085	chr2:177212562-177220085	3	+	177212799	177219299	789624	11	309,123,147,211,90,96,81,141,123,68,678,	0,2976,3187,3415,3940,4113,4297,5142,6474,6684,6845,
#Deleted in new
chr2	177212725	177212799	chr2:177212725-177212799	3	+	177212725	177212725	5263520	1	74,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	177212748	177223958	chr2:177212748-177223958	1	+	177212799	177219299	789624	11	57,123,147,211,90,96,81,141,123,68,4551,	0,2790,3001,3229,3754,3927,4111,4956,6288,6498,6659,
#Partially deleted in new
chr2	177212771	177219865	chr2:177212771-177219865	1	+	177212799	177219299	789624	10	100,123,147,211,90,96,81,141,123,619,	0,2767,2978,3206,3731,3904,4088,4933,6265,6475,
#Partially deleted in new
chr2	177216525	177219687	chr2:177216525-177219687	0	+	177216525	177219299	789624	6	67,72,33,123,68,280,	0,150,382,2511,2721,2882,
#Deleted in new
chr2	177219092	177219806	chr2:177219092-177219806	0	+	177219092	177219092	8553170	2	67,560,	0,154,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	177227594	177232487	chr2:177227594-177232487	0	-	177227905	177232487	789624	2	359,96,	0,4797,
#Deleted in new
chr2	177229190	177229506	chr2:177229190-177229506	7	-	177229190	177229190	16724991	1	316,	0,
#Partially deleted in new
chr2	177230304	177265131	chr2:177230304-177265131	1	-	177230784	177264576	0	5	1704,192,90,267,600,	0,2087,2945,3700,34227,
#Partially deleted in new
chr2	177230304	177263800	chr2:177230304-177263800	1	-	177230784	177234268	0	5	1704,192,90,267,398,	0,2087,2945,3700,33098,
#Partially deleted in new
chr2	177230307	177263572	chr2:177230307-177263572	1	-	177230784	177234268	0	5	1701,171,90,267,170,	0,2084,2942,3697,33095,
#Partially deleted in new
chr2	177230307	177392697	chr2:177230307-177392697	1	-	177230784	177234268	0	8	1701,192,90,267,135,137,102,125,	0,2084,2942,3697,92931,104085,108290,162265,
#Partially deleted in new
chr2	177230989	177263511	chr2:177230989-177263511	0	-	177230989	177234268	789624	3	604,196,109,	0,3086,32413,
#Partially deleted in new
chr2	177231713	177263567	chr2:177231713-177263567	0	-	177231713	177234268	789624	5	295,192,90,267,131,	0,678,1536,2291,31723,
#Partially deleted in new
chr2	177231789	177264823	chr2:177231789-177264823	0	-	177231789	177264576	789624	3	141,18,292,	0,2464,32742,
#Partially deleted in new
chr2	177231850	177263800	chr2:177231850-177263800	0	-	177231850	177234268	789624	5	158,192,90,267,272,	0,541,1399,2154,31678,
#Partially deleted in new
chr2	177232276	177263454	chr2:177232276-177263454	1	-	177233177	177234268	789624	3	1063,267,52,	0,1728,31126,
#Partially deleted in new
chr2	177232498	177287777	chr2:177232498-177287777	0	-	177232498	177234268	789624	5	85,90,267,205,167,	0,751,1506,51101,55112,
#Partially deleted in new
chr2	177233476	177263537	chr2:177233476-177263537	0	-	177233476	177233476	8553170	2	795,135,	0,29926,
#Partially deleted in new
chr2	177233878	177264659	chr2:177233878-177264659	0	-	177233878	177233878	8553170	2	393,128,	0,30653,
#Deleted in new
chr2	177255944	177256010	chr2:177255944-177256010	3	-	177255944	177255944	5263520	1	66,	0,
#Deleted in new
chr2	177264358	177265515	chr2:177264358-177265515	3	+	177264358	177264358	8553170	2	363,136,	0,1021,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	177283507	177392687	chr2:177283507-177392687	3	-	177283507	177283507	789624	9	4327,72,96,158,85,110,137,102,115,	0,27456,27725,39731,48064,48634,50885,55090,109065,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	177283511	177392691	chr2:177283511-177392691	0	-	177283511	177283511	8553170	6	4323,312,137,102,154,119,	0,39573,50881,55086,64810,109061,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	177300599	177302006	chr2:177300599-177302006	3	+	177300599	177300599	8553170	2	217,227,	0,1180,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	177306372	177310572	chr2:177306372-177310572	3	+	177306372	177306372	8553170	2	355,209,	0,3991,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	177310726	177314918	chr2:177310726-177314918	0	-	177310726	177310726	8553170	3	309,96,123,	0,506,4069,
#Deleted in new
chr2	177313805	177313882	chr2:177313805-177313882	3	-	177313805	177313805	5263520	1	77,	0,
#Deleted in new
chr2	177317714	177318471	chr2:177317714-177318471	3	-	177317714	177317714	8553170	1	757,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	177321606	177392681	chr2:177321606-177392681	0	-	177321606	177321606	8553170	6	631,93,110,137,102,109,	0,1697,10535,12786,16991,70966,
#Partially deleted in new
chr2	177338387	177342367	chr2:177338387-177342367	0	-	177338387	177338387	8553170	2	312,358,	0,3622,
#Partially deleted in new
chr2	177344442	177344836	chr2:177344442-177344836	7	+	177344442	177344442	16724991	1	394,	0,
#Partially deleted in new
chr2	177392643	177543836	chr2:177392643-177543836	3	+	177392789	177538195	789624	20	406,90,91,121,75,72,80,81,126,109,128,52,77,113,70,62,90,100,58,5763,	0,27625,41683,44120,44336,48321,49763,52902,69249,75772,89415,100504,105045,106974,112862,115326,121175,128625,131104,145430,
#Partially deleted in new
chr2	177392767	177538418	chr2:177392767-177538418	1	+	177392789	177538195	789624	5	282,90,40,58,345,	0,27501,128561,130980,145306,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr2	177420268	177559299	chr2:177420268-177559299	0	+	177420268	177558786	789624	19	90,91,121,75,72,80,81,126,109,128,52,77,113,70,62,90,100,58,548,	0,14058,16495,16711,20696,22138,25277,41624,48147,61790,72879,77420,79349,85237,87701,93550,101000,103479,138483,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr2	177434326	177559299	chr2:177434326-177559299	0	+	177434326	177551538	789624	19	91,121,75,72,80,81,126,109,128,52,77,113,70,62,90,100,58,220,548,	0,2437,2653,6638,8080,11219,27566,34089,47732,58821,63362,65291,71179,73643,79492,86942,89421,117036,124425,
#Deleted in new
chr2	177436983	177441469	chr2:177436983-177441469	0	+	177436983	177436983	8553170	2	71,505,	0,3981,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	177548997	177553014	chr2:177548997-177553014	3	-	177550765	177552763	789624	1	4017,	0,
#Partially deleted in new
chr2	177603088	177618572	chr2:177603088-177618572	3	+	177603088	177603088	8553170	3	85,220,285,	0,14212,15199,
#Deleted in new
chr2	177612991	177618966	chr2:177612991-177618966	3	-	177616703	177618701	789624	1	5975,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr2	177623251	178072755	chr2:177623251-178072755	3	-	177629406	178072437	789624	20	6311,84,75,64,78,101,91,110,108,147,51,93,68,76,133,65,141,90,159,1230,	0,40614,46241,52203,57574,74080,77869,88517,104406,104774,146071,193577,194606,196968,216999,252607,274806,281846,391050,448274,
#Partially deleted in new
chr2	177628068	178108339	chr2:177628068-178108339	3	-	177629406	178104463	789624	21	1494,84,75,64,78,101,91,110,108,147,51,93,68,76,133,65,141,90,159,175,86,	0,35797,41424,47386,52757,69263,73052,83700,99589,99957,141254,188760,189789,192151,212182,247790,269989,277029,386233,476233,480185,
#Partially deleted in new
chr2	177628611	177675660	chr2:177628611-177675660	0	-	177629406	177675660	789624	5	951,84,75,64,30,	0,35254,40881,46843,47019,
#Partially deleted in new
chr2	177629046	177922795	chr2:177629046-177922795	1	-	177629406	177905184	789624	20	275,164,84,75,64,78,101,91,110,108,147,51,93,68,76,133,65,141,90,88,	0,352,34819,40446,46408,51779,68285,72074,82722,98611,98979,140276,187782,188811,191173,211204,246812,269011,276051,293661,
#Partially deleted in new
chr2	177629174	177675552	chr2:177629174-177675552	0	-	177629174	177629174	8553170	3	388,84,98,	0,34691,46280,
#Partially deleted in new
chr2	177629245	177888738	chr2:177629245-177888738	1	-	177629406	177875893	789624	17	317,84,75,64,78,101,91,110,108,147,51,93,68,76,133,65,120,	0,34620,40247,46209,51580,68086,71875,82523,98412,98780,140077,187583,188612,190974,211005,246613,259373,
#Partially deleted in new
chr2	177629422	177676094	chr2:177629422-177676094	0	-	177629422	177629422	8553170	5	140,84,75,64,177,	0,34443,40070,46032,46495,
#Partially deleted in new
chr2	177669530	177683470	chr2:177669530-177683470	0	-	177669530	177669530	8553170	5	37,64,67,78,177,	0,5924,8350,11295,13763,
#Partially deleted in new
chr2	177675454	177905174	chr2:177675454-177905174	0	-	177675454	177905174	789624	14	64,78,101,91,110,108,147,51,68,76,133,65,141,77,	0,5371,21877,25666,36314,52203,52571,93868,142403,144765,164796,200404,222603,229643,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	177686706	177927009	chr2:177686706-177927009	0	-	177686706	177686706	8553170	15	1613,101,91,110,108,147,51,93,68,76,133,65,141,90,113,	0,10625,14414,25062,40951,41319,82616,130122,131151,133513,153544,189152,211351,218391,240190,
#Partially deleted in new
chr2	177698428	177723289	chr2:177698428-177723289	3	+	177698428	177698428	789624	4	143,135,262,201,	0,2665,4059,24660,
#Partially deleted in new
chr2	177698489	177723289	chr2:177698489-177723289	0	+	177698489	177698489	8553170	3	82,262,201,	0,3998,24599,
#Partially deleted in new
chr2	177797070	177888776	chr2:177797070-177888776	0	-	177797070	177797070	8553170	7	149,93,68,76,133,65,158,	0,19758,20787,23149,43180,78788,91548,
#Partially deleted in new
chr2	177898113	177922837	chr2:177898113-177922837	0	-	177899566	177905184	789624	5	85,86,90,228,130,	0,1391,6984,23617,24594,
#Partially deleted in new
chr2	177953110	178011989	chr2:177953110-178011989	3	-	177953110	177953110	8553170	2	171,83,	0,58796,
#Deleted in new
chr2	177997272	177998770	chr2:177997272-177998770	7	-	177997272	177997272	16724991	1	1498,	0,
#Deleted in new
chr2	178017992	178018465	chr2:178017992-178018465	7	+	178017992	178017992	16724991	1	473,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	178038901	178039004	chr2:178038901-178039004	3	+	178038901	178038901	8553170	1	103,	0,
#Partially deleted in new
chr2	178092502	178104470	chr2:178092502-178104470	7	-	178092502	178092502	16724991	3	82,64,169,	0,398,11799,
#Deleted in new
chr2	178105636	178105753	chr2:178105636-178105753	7	+	178105636	178105636	16724991	1	117,	0,
#Partially deleted in new
chr2	178112423	178129656	chr2:178112423-178129656	0	+	178112423	178112423	8553170	9	423,123,127,123,180,391,164,201,260,	0,3838,5631,7863,8756,11098,11703,13560,16973,
#Partially deleted in new
chr2	178112454	178129656	chr2:178112454-178129656	3	+	178112546	178126176	789624	10	392,123,127,123,180,130,85,164,201,260,	0,3807,5600,7832,8725,11067,11373,11672,13529,16942,
#Partially deleted in new
chr2	178112454	178129653	chr2:178112454-178129653	1	+	178112546	178126176	789624	10	392,123,127,123,186,130,85,164,201,257,	0,3807,5600,7832,8719,11067,11373,11672,13529,16942,
#Deleted in new
chr2	178121003	178124290	chr2:178121003-178124290	0	+	178121003	178121003	8553170	4	356,130,85,164,	0,2518,2824,3123,
#Partially deleted in new
chr2	178123862	178139011	chr2:178123862-178139011	0	+	178123862	178126176	789624	4	50,164,201,2549,	0,264,2121,12600,
#Partially deleted in new
chr2	178125724	178129656	chr2:178125724-178129656	0	+	178125724	178126176	789624	3	27,201,260,	0,259,3672,
#Partially deleted in new
chr2	178126138	178136776	chr2:178126138-178136776	0	+	178126138	178126138	8553170	3	46,40,314,	0,7722,10324,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	178142547	178142651	chr2:178142547-178142651	3	+	178142547	178142547	8553170	1	104,	0,
#Partially deleted in new
chr2	178194480	178399432	chr2:178194480-178399432	1	+	178306184	178395559	789624	24	194,195,257,93,123,54,114,171,133,104,93,166,134,138,88,254,138,64,79,145,145,127,123,3982,	0,90446,111549,129696,133775,137071,138160,138390,141820,144510,145191,154743,167201,179409,187939,188543,189558,190977,192580,194528,196592,197931,199832,200970,
#Partially deleted in new
chr2	178194480	178395772	chr2:178194480-178395772	1	+	178306184	178395559	789624	26	194,195,257,93,123,54,114,171,133,104,93,75,166,134,108,138,88,254,138,64,79,145,145,127,123,322,	0,90446,111549,129696,133775,137071,138160,138390,141820,144510,145191,149805,154743,167201,177645,179409,187939,188543,189558,190977,192580,194528,196592,197931,199832,200970,
#Partially deleted in new
chr2	178194488	178285038	chr2:178194488-178285038	0	+	178194488	178194488	8553170	3	186,88,112,	0,35937,90438,
#Partially deleted in new
chr2	178194499	178382779	chr2:178194499-178382779	1	+	178306184	178382614	789624	14	175,195,257,93,123,54,114,171,133,104,166,134,138,360,	0,90427,111530,129677,133756,137052,138141,138371,141801,144491,154724,167182,179390,187920,
#Partially deleted in new
chr2	178194522	178395772	chr2:178194522-178395772	1	+	178306184	178395559	789624	24	152,195,257,93,123,54,114,171,133,104,166,134,108,138,88,254,138,64,79,145,145,127,123,322,	0,90404,111507,129654,133733,137029,138118,138348,141778,144468,154701,167159,177603,179367,187897,188501,189516,190935,192538,194486,196550,197889,199790,200928,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr2	178194648	178402891	chr2:178194648-178402891	3	+	178306184	178395559	789624	25	26,195,257,93,123,54,114,171,133,104,93,166,134,108,138,88,254,138,64,79,145,145,127,123,7441,	0,90278,111381,129528,133607,136903,137992,138222,141652,144342,145023,154575,167033,177477,179241,187771,188375,189390,190809,192412,194360,196424,197763,199664,200802,
#Partially deleted in new
chr2	178284926	178395785	chr2:178284926-178395785	1	+	178306184	178395559	789624	23	195,257,93,123,54,114,171,133,104,93,166,134,138,88,254,138,64,79,145,145,127,123,335,	0,21103,39250,43329,46625,47714,47944,51374,54064,54745,64297,76755,88963,97493,98097,99112,100531,102134,104082,106146,107485,109386,110524,
#Partially deleted in new
chr2	178320243	178395621	chr2:178320243-178395621	1	+	178320363	178395559	789624	24	159,93,123,54,114,171,133,104,93,75,166,134,108,138,88,254,138,64,79,145,145,127,123,171,	0,3933,8012,11308,12397,12627,16057,18747,19428,24042,28980,41438,51882,53646,62176,62780,63795,65214,66817,68765,70829,72168,74069,75207,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	178323569	178332701	chr2:178323569-178332701	0	+	178323569	178323569	8553170	5	211,93,123,54,61,	0,607,4686,7982,9071,
#Partially deleted in new
chr2	178413938	178430824	chr2:178413938-178430824	0	+	178413938	178413938	8553170	3	175,146,169,	0,1879,16717,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	178413967	178431341	chr2:178413967-178431341	1	+	178413967	178413967	8553170	4	146,140,212,295,	0,12398,16710,17079,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	178413986	178419123	chr2:178413986-178419123	0	+	178413986	178413986	8553170	2	127,613,	0,4524,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	178413993	178440243	chr2:178413993-178440243	3	+	178413993	178413993	789624	5	120,296,120,94,1377,	0,12372,16776,19388,24873,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	178413998	178434091	chr2:178413998-178434091	1	+	178413998	178413998	789624	3	115,195,710,	0,16696,19383,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	178414022	178432282	chr2:178414022-178432282	0	+	178414022	178414022	8553170	4	91,338,120,113,	0,12343,16747,18147,
#Partially deleted in new
chr2	178431413	178451231	chr2:178431413-178451231	3	-	178432096	178451030	0	8	841,175,95,118,79,82,170,266,	0,4731,10196,11853,13008,16091,18828,19552,
#Partially deleted in new
chr2	178431414	178444007	chr2:178431414-178444007	0	-	178431414	178431414	8553170	4	840,175,95,741,	0,4730,10195,11852,
#Partially deleted in new
chr2	178431653	178451151	chr2:178431653-178451151	0	-	178445534	178451030	789624	9	601,175,95,118,79,110,82,170,186,	0,4491,9956,11613,12768,13772,15851,18588,19312,
#Partially deleted in new
chr2	178431965	178450764	chr2:178431965-178450764	1	-	178432096	178450401	0	8	289,175,95,118,79,82,170,203,	0,4179,9644,11301,12456,15539,18276,18596,
#Partially deleted in new
chr2	178431975	178450757	chr2:178431975-178450757	1	-	178432096	178450443	0	7	279,175,95,118,79,82,516,	0,4169,9634,11291,12446,15529,18266,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	178436273	178445883	chr2:178436273-178445883	0	-	178436273	178436273	8553170	5	46,95,118,79,458,	0,5336,6993,8148,9152,
#Partially deleted in new
chr2	178443288	178450484	chr2:178443288-178450484	0	-	178447500	178450443	789624	4	96,79,131,243,	0,1133,4167,6953,
#Partially deleted in new
chr2	178443342	178451059	chr2:178443342-178451059	0	-	178443342	178450443	789624	3	42,82,818,	0,4162,6899,
#Partially deleted in new
chr2	178445425	178451512	chr2:178445425-178451512	0	-	178445425	178445425	8553170	5	110,82,170,56,132,	0,2079,4816,5540,5955,
#Partially deleted in new
chr2	178445494	178450729	chr2:178445494-178450729	0	-	178445494	178445494	8553170	4	41,82,170,168,	0,2010,4747,5067,
#Partially deleted in new
chr2	178447319	178451113	chr2:178447319-178451113	0	-	178447319	178447319	8553170	3	267,170,148,	0,2922,3646,
#Deleted in new
chr2	178450078	178451173	chr2:178450078-178451173	0	-	178450078	178450078	8553170	2	333,208,	0,887,
#Partially deleted in new
chr2	178451345	178461292	chr2:178451345-178461292	1	+	178456079	178461274	789624	8	424,190,101,196,142,118,99,311,	0,2085,2759,2986,4664,7164,9002,9636,
#Partially deleted in new
chr2	178451417	178461287	chr2:178451417-178461287	1	+	178453409	178461274	789624	7	352,233,196,142,118,99,306,	0,1970,2914,4592,7092,8930,9564,
#Partially deleted in new
chr2	178451430	178461287	chr2:178451430-178461287	1	+	178456079	178461274	789624	7	339,68,196,142,118,99,306,	0,2122,2901,4579,7079,8917,9551,
#Partially deleted in new
chr2	178451435	178461390	chr2:178451435-178461390	3	+	178453409	178461274	789624	7	334,233,196,142,118,99,409,	0,1952,2896,4574,7074,8912,9546,
#Partially deleted in new
chr2	178451435	178458526	chr2:178451435-178458526	0	+	178456079	178458526	789624	6	334,112,68,196,142,17,	0,1022,2117,2896,4574,7074,
#Partially deleted in new
chr2	178451703	178456092	chr2:178451703-178456092	0	+	178456079	178456092	8553170	5	66,112,190,196,83,	0,754,1727,2628,4306,
#Partially deleted in new
chr2	178451739	178461394	chr2:178451739-178461394	1	+	178456079	178461274	789624	7	131,190,196,142,118,99,413,	0,1691,2592,4270,6770,8608,9242,
#Partially deleted in new
chr2	178452404	178461215	chr2:178452404-178461215	0	+	178453409	178461215	789624	5	1216,196,142,118,234,	0,1927,3605,6105,8577,
#Partially deleted in new
chr2	178452434	178461409	chr2:178452434-178461409	1	+	178456079	178461274	789624	7	135,68,196,142,118,99,428,	0,1118,1897,3575,6075,7913,8547,
#Partially deleted in new
chr2	178453250	178461287	chr2:178453250-178461287	0	+	178453250	178453250	8553170	5	1277,142,118,99,306,	0,2759,5259,7097,7731,
#Partially deleted in new
chr2	178453266	178461274	chr2:178453266-178461274	1	+	178453409	178461274	789624	6	354,196,142,118,99,293,	0,1065,2743,5243,7081,7715,
#Deleted in new
chr2	178453295	178456240	chr2:178453295-178456240	0	+	178453295	178453295	8553170	3	325,196,231,	0,1036,2714,
#Partially deleted in new
chr2	178453567	178461204	chr2:178453567-178461204	0	+	178453567	178460425	789624	5	53,196,142,99,223,	0,764,2442,6780,7414,
#Partially deleted in new
chr2	178454463	178459981	chr2:178454463-178459981	0	+	178454463	178454463	8553170	4	64,142,118,187,	0,1546,4046,5331,
#Partially deleted in new
chr2	178454478	178460432	chr2:178454478-178460432	0	+	178454478	178459200	789624	5	49,142,118,77,85,	0,1531,4031,4714,5869,
#Deleted in new
chr2	178454715	178455428	chr2:178454715-178455428	7	+	178454715	178454715	16724991	1	713,	0,
#Partially deleted in new
chr2	178458533	178461285	chr2:178458533-178461285	0	+	178458533	178460985	789624	3	94,73,304,	0,1814,2448,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	178463663	178478558	chr2:178463663-178478558	3	-	178465769	178478499	789624	4	2268,134,152,280,	0,5988,13398,14615,
#Partially deleted in new
chr2	178465255	178478553	chr2:178465255-178478553	0	-	178465255	178465255	8553170	3	676,152,275,	0,11806,13023,
#Partially deleted in new
chr2	178465598	178478575	chr2:178465598-178478575	0	-	178473131	178478499	789624	5	333,134,114,152,297,	0,4053,7430,11463,12680,
#Partially deleted in new
chr2	178465690	178478553	chr2:178465690-178478553	0	-	178473138	178478499	789624	4	241,134,114,275,	0,3961,7338,12588,
#Partially deleted in new
chr2	178465698	178478600	chr2:178465698-178478600	0	-	178465698	178465698	8553170	2	233,322,	0,12580,
#Partially deleted in new
chr2	178465744	178478595	chr2:178465744-178478595	0	-	178469745	178478499	789624	3	187,134,317,	0,3907,12534,
#Partially deleted in new
chr2	178465769	178478499	chr2:178465769-178478499	1	-	178465769	178478499	789624	4	162,131,152,221,	0,3882,11292,12509,
#Partially deleted in new
chr2	178467806	178478317	chr2:178467806-178478317	0	-	178473131	178478317	789624	5	90,131,114,152,39,	0,1845,5222,9255,10472,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	178480467	178516462	chr2:178480467-178516462	3	+	178480869	178503887	0	8	442,117,156,137,165,44,116,12703,	0,5173,10191,13385,15028,18743,20593,23292,
#Partially deleted in new
chr2	178480732	178495610	chr2:178480732-178495610	0	+	178480869	178488996	789624	6	177,117,47,156,137,115,	0,4908,8235,9926,13120,14763,
#Partially deleted in new
chr2	178481860	178493989	chr2:178481860-178493989	0	+	178481860	178481860	8553170	4	118,117,156,137,	0,3780,8798,11992,
#Partially deleted in new
chr2	178495618	178503961	chr2:178495618-178503961	0	+	178495618	178502478	789624	5	42,44,116,148,202,	0,3592,5442,6717,8141,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	178521182	178531578	chr2:178521182-178531578	1	+	178521182	178521182	8553170	4	119,376,185,265,	0,610,2269,10131,
#Partially deleted in new
chr2	178522826	178605405	chr2:178522826-178605405	1	+	178522826	178522826	789624	17	34,185,97,331,1193,63,140,135,191,398,421,176,86,118,157,192,675,	0,625,12905,14534,15871,17280,19395,59745,60164,60697,61746,68312,74769,75729,76767,77649,81904,
#Partially deleted in new
chr2	178523014	178531578	chr2:178523014-178531578	0	+	178523014	178523014	8553170	3	243,99,265,	0,523,8299,
#Partially deleted in new
chr2	178523166	178539159	chr2:178523166-178539159	1	+	178523166	178523166	8553170	6	470,90,265,97,88,462,	0,5557,8147,12565,14437,15531,
#Partially deleted in new
chr2	178523166	178535828	chr2:178523166-178535828	0	+	178523166	178523166	8553170	3	470,265,97,	0,8147,12565,
#Partially deleted in new
chr2	178523175	178628771	chr2:178523175-178628771	1	+	178523175	178523175	8553170	6	461,90,86,157,110,11,	0,5548,74420,76418,77382,105585,
#Partially deleted in new
chr2	178523214	178539253	chr2:178523214-178539253	3	+	178523214	178523214	8553170	3	422,88,556,	0,14389,15483,
#Partially deleted in new
chr2	178523215	178527361	chr2:178523215-178527361	0	+	178523215	178523215	8553170	2	421,166,	0,3980,
#Partially deleted in new
chr2	178523223	178620214	chr2:178523223-178620214	1	+	178523223	178523223	789624	7	413,150,86,100,770,52,462,	0,48076,74372,84943,90811,92099,96529,
#Partially deleted in new
chr2	178523291	178538922	chr2:178523291-178538922	0	+	178523291	178523291	8553170	4	345,97,88,225,	0,12440,14312,15406,
#Partially deleted in new
chr2	178523291	178584852	chr2:178523291-178584852	1	+	178523291	178523291	8553170	3	345,209,280,	0,60421,61281,
#Partially deleted in new
chr2	178523291	178539195	chr2:178523291-178539195	0	+	178523291	178523291	8553170	5	345,90,97,88,498,	0,5432,12440,14312,15406,
#Partially deleted in new
chr2	178523291	178543432	chr2:178523291-178543432	1	+	178523291	178523291	8553170	4	345,140,180,190,	0,18930,19524,19951,
#Partially deleted in new
chr2	178523291	178597681	chr2:178523291-178597681	0	+	178523291	178523291	8553170	3	345,97,86,	0,12440,74304,
#Partially deleted in new
chr2	178523291	178584989	chr2:178523291-178584989	0	+	178523291	178523291	8553170	2	345,417,	0,61281,
#Partially deleted in new
chr2	178523291	178713900	chr2:178523291-178713900	0	+	178523291	178523291	8553170	4	345,88,86,147,	0,14312,74304,190462,
#Partially deleted in new
chr2	178523291	178619888	chr2:178523291-178619888	0	+	178523291	178523291	8553170	4	345,86,52,136,	0,74304,92031,96461,
#Partially deleted in new
chr2	178523438	178774658	chr2:178523438-178774658	1	+	178523438	178523438	8553170	5	198,75,183,61,432,	0,237501,240747,249836,250788,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	178523556	178527377	chr2:178523556-178527377	1	+	178523556	178523556	8553170	3	80,137,182,	0,530,3639,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	178523903	178531580	chr2:178523903-178531580	0	+	178523903	178523903	8553170	2	320,267,	0,7410,
#Partially deleted in new
chr2	178525988	178807421	chr2:178525988-178807421	3	-	178527011	178804642	0	312	1319,303,154,692,157,5609,594,306,576,300,306,585,303,303,300,288,594,282,306,306,297,291,306,303,2067,300,288,294,1767,306,303,300,288,297,303,588,297,17106,303,588,297,198,105,588,288,291,288,306,303,297,288,300,303,300,276,303,300,285,321,2967,294,300,282,309,303,300,282,303,303,282,151,149,315,300,297,318,300,130,33,149,309,430,191,309,300,294,285,297,300,303,363,303,300,279,306,197,106,300,300,116,187,297,288,122,178,148,152,285,115,188,303,303,270,267,125,409,279,267,267,169,98,267,124,143,127,140,267,267,267,127,140,264,267,264,127,140,276,279,402,51,90,63,90,75,81,69,111,78,108,84,78,84,84,84,84,84,84,84,84,90,78,81,297,75,69,78,96,75,75,297,84,84,84,78,84,162,78,93,75,78,207,81,84,84,84,84,78,81,114,102,84,84,81,84,84,84,81,87,78,78,63,405,48,72,84,60,27,78,210,261,268,90,184,286,93,288,291,288,288,279,279,279,288,279,282,279,282,288,288,279,279,279,288,279,282,279,282,288,288,279,279,279,288,279,282,279,282,279,288,279,279,279,282,279,288,279,279,279,282,279,288,279,279,279,282,564,279,57,189,126,285,232,166,142,261,261,261,264,261,261,264,273,267,282,1694,169,165,272,245,234,206,143,216,64,259,66,282,123,294,138,138,138,126,138,153,331,245,86,288,204,104,210,	0,1457,2285,2539,3971,4252,9993,10949,11353,12551,12957,13393,14079,15293,16275,16673,17080,17845,18212,19399,19831,20223,20611,21014,21418,23581,23997,24978,25641,27513,27925,28464,28876,30859,31264,31659,32352,33322,50540,50934,51613,51999,52622,52817,53572,53950,54333,55510,55917,56307,56951,57618,58287,58680,59083,60516,61129,61527,61910,62549,65610,65989,66390,66786,67184,67579,67972,68355,69518,71549,71919,72517,72759,73157,73565,74865,75276,75669,75893,76013,76293,77887,78719,78998,79425,81032,81412,81796,82189,82617,83219,83695,84101,85004,85383,85769,86068,86288,86784,87172,87762,88063,88477,88858,89318,89652,90490,90740,91131,91336,91790,92200,92595,93632,93999,94228,94726,95113,95486,95851,96681,98476,99284,103312,104252,104815,105045,106158,106537,106929,107198,107424,107828,108377,108734,109176,109451,109974,110409,111380,113710,114059,114552,115252,116248,118559,119931,123828,124175,124762,125254,125464,125677,125895,126107,126275,126469,133016,133183,136977,144229,145101,145982,146418,146646,147644,148325,149050,149932,151632,152136,152425,152758,153350,153610,153905,154265,155090,155387,155672,156708,157222,158010,158341,158677,158917,159264,159529,162122,162688,163064,163301,163526,163824,166027,166508,167620,167933,168610,168840,169359,169876,171132,172854,175131,175539,176051,176179,176465,178158,178521,178888,179185,180465,180873,181537,183577,184646,185073,185955,186326,186708,187096,187908,188303,188997,189504,191106,191534,191954,192333,192706,193175,193565,193994,194396,194932,195858,196270,196670,197057,197429,197867,198271,199379,199779,201101,201596,202121,202511,202902,203299,203675,204104,204516,204936,205316,205704,206077,206451,206845,207250,207625,208339,208718,209522,212093,227135,232995,238188,238538,240392,241770,242025,242684,243690,244071,244423,245222,247120,247473,247849,248218,248932,249367,251160,251431,251715,252885,253240,254011,255132,256223,256550,256817,257731,258081,259631,259859,263371,263989,264719,266083,267415,268410,268933,273498,273836,274406,276149,278563,281223,
#Partially deleted in new
chr2	178525988	178807423	chr2:178525988-178807423	1	-	178527011	178804642	0	191	1319,303,154,692,157,5609,594,306,576,300,306,585,303,303,300,288,594,282,306,306,297,291,306,303,2067,300,288,294,1767,306,303,300,288,297,303,588,297,17106,303,588,297,198,105,588,288,291,288,306,303,297,288,300,303,300,276,303,300,285,321,2967,294,300,282,309,303,300,282,303,303,282,151,149,315,300,297,318,300,130,33,149,309,430,191,309,300,294,285,297,300,303,363,303,300,279,306,197,106,300,300,116,187,297,288,122,178,148,152,285,115,188,303,303,270,267,125,409,279,267,267,169,98,267,124,143,127,140,267,267,267,127,140,264,267,264,127,140,276,279,402,51,90,63,90,75,81,279,2781,57,189,126,285,232,166,142,261,261,261,264,261,261,264,273,267,282,1694,169,165,272,245,234,206,143,216,64,259,66,282,123,294,138,138,126,138,153,331,245,86,288,204,104,212,	0,1457,2285,2539,3971,4252,9993,10949,11353,12551,12957,13393,14079,15293,16275,16673,17080,17845,18212,19399,19831,20223,20611,21014,21418,23581,23997,24978,25641,27513,27925,28464,28876,30859,31264,31659,32352,33322,50540,50934,51613,51999,52622,52817,53572,53950,54333,55510,55917,56307,56951,57618,58287,58680,59083,60516,61129,61527,61910,62549,65610,65989,66390,66786,67184,67579,67972,68355,69518,71549,71919,72517,72759,73157,73565,74865,75276,75669,75893,76013,76293,77887,78719,78998,79425,81032,81412,81796,82189,82617,83219,83695,84101,85004,85383,85769,86068,86288,86784,87172,87762,88063,88477,88858,89318,89652,90490,90740,91131,91336,91790,92200,92595,93632,93999,94228,94726,95113,95486,95851,96681,98476,99284,103312,104252,104815,105045,106158,106537,106929,107198,107424,107828,108377,108734,109176,109451,109974,110409,111380,113710,114059,114552,115252,116248,212093,213152,227135,232995,238188,238538,240392,241770,242025,242684,243690,244071,244423,245222,247120,247473,247849,248218,248932,249367,251160,251431,251715,252885,253240,254011,255132,256223,256550,256817,257731,258081,259631,259859,263371,263989,266083,267415,268410,268933,273498,273836,274406,276149,278563,281223,
#Partially deleted in new
chr2	178525988	178807423	chr2:178525988-178807423	1	-	178527011	178804642	789624	363	1319,303,154,692,157,5609,594,306,576,300,306,585,303,303,300,288,594,282,306,306,297,291,306,303,2067,300,288,294,1767,306,303,300,288,297,303,588,297,17106,303,588,297,198,105,588,288,291,288,306,303,297,288,300,303,300,276,303,300,285,321,2967,294,300,282,309,303,300,282,303,303,282,151,149,315,300,297,318,300,130,33,149,309,430,191,309,300,294,285,297,300,303,363,303,300,279,306,197,106,300,300,116,187,297,288,122,178,148,152,285,115,188,303,303,270,267,125,409,279,267,267,169,98,267,124,143,127,140,267,267,267,127,140,264,267,264,127,140,276,279,402,51,90,63,90,75,81,69,111,75,81,84,84,78,78,108,84,78,84,84,84,84,84,84,84,84,84,84,81,81,81,84,84,90,84,84,84,81,81,81,84,84,90,84,84,84,81,81,81,84,84,90,84,84,84,84,84,78,84,75,84,84,78,84,84,84,75,84,78,81,297,75,69,78,96,75,84,75,87,297,84,84,84,78,84,162,78,93,75,78,207,81,84,84,84,84,78,81,114,102,84,84,81,84,84,84,81,87,78,78,63,405,48,72,84,60,27,78,210,261,268,90,184,286,93,288,291,288,288,279,279,279,288,279,282,279,282,288,288,279,279,279,288,279,282,279,282,288,288,279,279,279,288,279,282,279,282,279,288,279,279,279,282,279,288,279,279,279,282,279,288,279,279,279,282,564,279,2781,57,576,375,189,126,285,232,166,142,261,261,261,264,261,261,264,273,267,282,1694,169,165,272,245,234,206,143,216,64,259,66,282,123,294,138,138,138,126,138,153,331,245,86,288,204,104,212,	0,1457,2285,2539,3971,4252,9993,10949,11353,12551,12957,13393,14079,15293,16275,16673,17080,17845,18212,19399,19831,20223,20611,21014,21418,23581,23997,24978,25641,27513,27925,28464,28876,30859,31264,31659,32352,33322,50540,50934,51613,51999,52622,52817,53572,53950,54333,55510,55917,56307,56951,57618,58287,58680,59083,60516,61129,61527,61910,62549,65610,65989,66390,66786,67184,67579,67972,68355,69518,71549,71919,72517,72759,73157,73565,74865,75276,75669,75893,76013,76293,77887,78719,78998,79425,81032,81412,81796,82189,82617,83219,83695,84101,85004,85383,85769,86068,86288,86784,87172,87762,88063,88477,88858,89318,89652,90490,90740,91131,91336,91790,92200,92595,93632,93999,94228,94726,95113,95486,95851,96681,98476,99284,103312,104252,104815,105045,106158,106537,106929,107198,107424,107828,108377,108734,109176,109451,109974,110409,111380,113710,114059,114552,115252,116248,118559,119931,120496,121075,121392,123259,123565,123828,124175,124762,125254,125464,125677,125895,126107,126275,126469,126664,126859,127052,127249,127438,127632,127828,128023,128219,128456,128756,128923,131509,131698,131892,132088,132283,132479,132716,133016,133183,135770,135959,136153,136349,136544,136740,136977,137277,137444,137638,137830,138026,138471,138665,138863,139388,139719,140835,141247,141453,141649,143384,143603,144229,145101,145982,146418,146646,147644,148325,149050,149682,149932,151212,151632,152136,152425,152758,153350,153610,153905,154265,155090,155387,155672,156708,157222,158010,158341,158677,158917,159264,159529,162122,162688,163064,163301,163526,163824,166027,166508,167620,167933,168610,168840,169359,169876,171132,172854,175131,175539,176051,176179,176465,178158,178521,178888,179185,180465,180873,181537,183577,184646,185073,185955,186326,186708,187096,187908,188303,188997,189504,191106,191534,191954,192333,192706,193175,193565,193994,194396,194932,195858,196270,196670,197057,197429,197867,198271,199379,199779,201101,201596,202121,202511,202902,203299,203675,204104,204516,204936,205316,205704,206077,206451,206845,207250,207625,208339,208718,209522,212093,213152,227135,230233,231553,232995,238188,238538,240392,241770,242025,242684,243690,244071,244423,245222,247120,247473,247849,248218,248932,249367,251160,251431,251715,252885,253240,254011,255132,256223,256550,256817,257731,258081,259631,259859,263371,263989,264719,266083,267415,268410,268933,273498,273836,274406,276149,278563,281223,
#Partially deleted in new
chr2	178525988	178807423	chr2:178525988-178807423	1	-	178527011	178804642	0	313	1319,303,154,692,157,5609,594,306,576,300,306,585,303,303,300,288,594,282,306,306,297,291,306,303,2067,300,288,294,1767,306,303,300,288,297,303,588,297,17106,303,588,297,198,105,588,288,291,288,306,303,297,288,300,303,300,276,303,300,285,321,2967,294,300,282,309,303,300,282,303,303,282,151,149,315,300,297,318,300,130,33,149,309,430,191,309,300,294,285,297,300,303,363,303,300,279,306,197,106,300,300,116,187,297,288,122,178,148,152,285,115,188,303,303,270,267,125,409,279,267,267,169,98,267,124,143,127,140,267,267,267,127,140,264,267,264,127,140,276,279,402,51,90,63,90,75,81,69,111,78,108,84,78,84,84,84,84,84,84,84,84,90,78,81,297,75,69,78,96,75,75,297,84,84,84,78,84,162,78,93,75,78,207,81,84,84,84,84,78,81,114,102,84,84,81,84,84,84,81,87,78,78,63,405,48,72,84,60,27,78,210,261,268,90,184,286,93,288,291,288,288,279,279,279,288,279,282,279,282,288,288,279,279,279,288,279,282,279,282,288,288,279,279,279,288,279,282,279,282,279,288,279,279,279,282,279,288,279,279,279,282,279,288,279,279,279,282,564,279,2781,57,189,126,285,232,166,142,261,261,261,264,261,261,264,273,267,282,1694,169,165,272,245,234,206,143,216,64,259,66,282,123,294,138,138,138,126,138,153,331,245,86,288,204,104,212,	0,1457,2285,2539,3971,4252,9993,10949,11353,12551,12957,13393,14079,15293,16275,16673,17080,17845,18212,19399,19831,20223,20611,21014,21418,23581,23997,24978,25641,27513,27925,28464,28876,30859,31264,31659,32352,33322,50540,50934,51613,51999,52622,52817,53572,53950,54333,55510,55917,56307,56951,57618,58287,58680,59083,60516,61129,61527,61910,62549,65610,65989,66390,66786,67184,67579,67972,68355,69518,71549,71919,72517,72759,73157,73565,74865,75276,75669,75893,76013,76293,77887,78719,78998,79425,81032,81412,81796,82189,82617,83219,83695,84101,85004,85383,85769,86068,86288,86784,87172,87762,88063,88477,88858,89318,89652,90490,90740,91131,91336,91790,92200,92595,93632,93999,94228,94726,95113,95486,95851,96681,98476,99284,103312,104252,104815,105045,106158,106537,106929,107198,107424,107828,108377,108734,109176,109451,109974,110409,111380,113710,114059,114552,115252,116248,118559,119931,123828,124175,124762,125254,125464,125677,125895,126107,126275,126469,128756,128923,132716,144229,145101,145982,146418,146646,147644,148325,149050,149932,151632,152136,152425,152758,153350,153610,153905,154265,155090,155387,155672,156708,157222,158010,158341,158677,158917,159264,159529,162122,162688,163064,163301,163526,163824,166027,166508,167620,167933,168610,168840,169359,169876,171132,172854,175131,175539,176051,176179,176465,178158,178521,178888,179185,180465,180873,181537,183577,184646,185073,185955,186326,186708,187096,187908,188303,188997,189504,191106,191534,191954,192333,192706,193175,193565,193994,194396,194932,195858,196270,196670,197057,197429,197867,198271,199379,199779,201101,201596,202121,202511,202902,203299,203675,204104,204516,204936,205316,205704,206077,206451,206845,207250,207625,208339,208718,209522,212093,213152,227135,232995,238188,238538,240392,241770,242025,242684,243690,244071,244423,245222,247120,247473,247849,248218,248932,249367,251160,251431,251715,252885,253240,254011,255132,256223,256550,256817,257731,258081,259631,259859,263371,263989,264719,266083,267415,268410,268933,273498,273836,274406,276149,278563,281223,
#Partially deleted in new
chr2	178527011	178804642	chr2:178527011-178804642	1	-	178527011	178804642	789624	191	296,303,154,692,157,5609,594,306,576,300,306,585,303,303,300,288,594,282,306,306,297,291,306,303,2067,300,288,294,1767,306,303,300,288,297,303,588,297,17106,303,588,297,198,105,588,288,291,288,306,303,297,288,300,303,300,276,303,300,285,321,2967,294,300,282,309,303,300,282,303,303,282,151,149,315,300,297,318,300,130,33,149,309,430,191,309,300,294,285,297,300,303,363,303,300,279,306,197,106,300,300,116,187,297,288,122,178,148,152,285,115,188,303,303,270,267,125,409,279,267,267,169,98,267,124,143,127,140,267,267,267,127,140,264,267,264,127,140,276,279,402,51,90,63,90,75,81,279,2781,57,576,189,126,285,232,166,142,261,261,261,264,261,261,264,273,267,282,1694,169,165,272,245,234,206,143,216,64,259,66,282,123,294,138,138,126,138,153,331,245,86,288,204,91,	0,434,1262,1516,2948,3229,8970,9926,10330,11528,11934,12370,13056,14270,15252,15650,16057,16822,17189,18376,18808,19200,19588,19991,20395,22558,22974,23955,24618,26490,26902,27441,27853,29836,30241,30636,31329,32299,49517,49911,50590,50976,51599,51794,52549,52927,53310,54487,54894,55284,55928,56595,57264,57657,58060,59493,60106,60504,60887,61526,64587,64966,65367,65763,66161,66556,66949,67332,68495,70526,70896,71494,71736,72134,72542,73842,74253,74646,74870,74990,75270,76864,77696,77975,78402,80009,80389,80773,81166,81594,82196,82672,83078,83981,84360,84746,85045,85265,85761,86149,86739,87040,87454,87835,88295,88629,89467,89717,90108,90313,90767,91177,91572,92609,92976,93205,93703,94090,94463,94828,95658,97453,98261,102289,103229,103792,104022,105135,105514,105906,106175,106401,106805,107354,107711,108153,108428,108951,109386,110357,112687,113036,113529,114229,115225,211070,212129,226112,229210,231972,237165,237515,239369,240747,241002,241661,242667,243048,243400,244199,246097,246450,246826,247195,247909,248344,250137,250408,250692,251862,252217,252988,254109,255200,255527,255794,256708,257058,258608,258836,262348,262966,265060,266392,267387,267910,272475,272813,273383,275126,277540,
#Partially deleted in new
chr2	178527011	178804642	chr2:178527011-178804642	1	-	178527011	178804642	0	191	296,303,154,692,157,5609,594,306,576,300,306,585,303,303,300,288,594,282,306,306,297,291,306,303,2067,300,288,294,1767,306,303,300,288,297,303,588,297,17106,303,588,297,198,105,588,288,291,288,306,303,297,288,300,303,300,276,303,300,285,321,2967,294,300,282,309,303,300,282,303,303,282,151,149,315,300,297,318,300,130,33,149,309,430,191,309,300,294,285,297,300,303,363,303,300,279,306,197,106,300,300,116,187,297,288,122,178,148,152,285,115,188,303,303,270,267,125,409,279,267,267,169,98,267,124,143,127,140,267,267,267,127,140,264,267,264,127,140,276,279,402,51,90,63,90,75,81,279,2781,57,375,189,126,285,232,166,142,261,261,261,264,261,261,264,273,267,282,1694,169,165,272,245,234,206,143,216,64,259,66,282,123,294,138,138,126,138,153,331,245,86,288,204,91,	0,434,1262,1516,2948,3229,8970,9926,10330,11528,11934,12370,13056,14270,15252,15650,16057,16822,17189,18376,18808,19200,19588,19991,20395,22558,22974,23955,24618,26490,26902,27441,27853,29836,30241,30636,31329,32299,49517,49911,50590,50976,51599,51794,52549,52927,53310,54487,54894,55284,55928,56595,57264,57657,58060,59493,60106,60504,60887,61526,64587,64966,65367,65763,66161,66556,66949,67332,68495,70526,70896,71494,71736,72134,72542,73842,74253,74646,74870,74990,75270,76864,77696,77975,78402,80009,80389,80773,81166,81594,82196,82672,83078,83981,84360,84746,85045,85265,85761,86149,86739,87040,87454,87835,88295,88629,89467,89717,90108,90313,90767,91177,91572,92609,92976,93205,93703,94090,94463,94828,95658,97453,98261,102289,103229,103792,104022,105135,105514,105906,106175,106401,106805,107354,107711,108153,108428,108951,109386,110357,112687,113036,113529,114229,115225,211070,212129,226112,230530,231972,237165,237515,239369,240747,241002,241661,242667,243048,243400,244199,246097,246450,246826,247195,247909,248344,250137,250408,250692,251862,252217,252988,254109,255200,255527,255794,256708,257058,258608,258836,262348,262966,265060,266392,267387,267910,272475,272813,273383,275126,277540,
#Partially deleted in new
chr2	178527011	178804642	chr2:178527011-178804642	1	-	178527011	178804642	0	312	296,303,154,692,157,5609,594,306,576,300,306,585,303,303,300,288,594,282,306,306,297,291,306,303,2067,300,288,294,1767,306,303,300,288,297,303,588,297,17106,303,588,297,198,105,588,288,291,288,306,303,297,288,300,303,300,276,303,300,285,321,2967,294,300,282,309,303,300,282,303,303,282,151,149,315,300,297,318,300,130,33,149,309,430,191,309,300,294,285,297,300,303,363,303,300,279,306,197,106,300,300,116,187,297,288,122,178,148,152,285,115,188,303,303,270,267,125,409,279,267,267,169,98,267,124,143,127,140,267,267,267,127,140,264,267,264,127,140,276,279,402,51,90,63,90,75,81,69,111,78,108,84,78,84,84,84,84,84,84,84,84,90,78,81,297,75,69,78,96,75,75,297,84,84,84,78,84,162,78,93,75,78,207,81,84,84,84,84,78,81,114,102,84,84,81,84,84,84,81,87,78,78,63,405,48,72,84,60,27,78,210,261,268,90,184,286,93,288,291,288,288,279,279,279,288,279,282,279,282,288,288,279,279,279,288,279,282,279,282,288,288,279,279,279,288,279,282,279,282,279,288,279,279,279,282,279,288,279,279,279,282,279,288,279,279,279,282,564,279,2781,57,189,126,285,232,166,142,261,261,261,264,261,261,264,273,267,282,1694,169,165,272,245,234,206,143,216,64,259,66,282,123,294,138,138,138,126,138,153,331,245,86,288,204,91,	0,434,1262,1516,2948,3229,8970,9926,10330,11528,11934,12370,13056,14270,15252,15650,16057,16822,17189,18376,18808,19200,19588,19991,20395,22558,22974,23955,24618,26490,26902,27441,27853,29836,30241,30636,31329,32299,49517,49911,50590,50976,51599,51794,52549,52927,53310,54487,54894,55284,55928,56595,57264,57657,58060,59493,60106,60504,60887,61526,64587,64966,65367,65763,66161,66556,66949,67332,68495,70526,70896,71494,71736,72134,72542,73842,74253,74646,74870,74990,75270,76864,77696,77975,78402,80009,80389,80773,81166,81594,82196,82672,83078,83981,84360,84746,85045,85265,85761,86149,86739,87040,87454,87835,88295,88629,89467,89717,90108,90313,90767,91177,91572,92609,92976,93205,93703,94090,94463,94828,95658,97453,98261,102289,103229,103792,104022,105135,105514,105906,106175,106401,106805,107354,107711,108153,108428,108951,109386,110357,112687,113036,113529,114229,115225,117536,118908,122805,123152,123739,124231,124441,124654,124872,125084,125252,125446,131993,132160,135954,143206,144078,144959,145395,145623,146621,147302,148027,148909,150609,151113,151402,151735,152327,152587,152882,153242,154067,154364,154649,155685,156199,156987,157318,157654,157894,158241,158506,161099,161665,162041,162278,162503,162801,165004,165485,166597,166910,167587,167817,168336,168853,170109,171831,174108,174516,175028,175156,175442,177135,177498,177865,178162,179442,179850,180514,182554,183623,184050,184932,185303,185685,186073,186885,187280,187974,188481,190083,190511,190931,191310,191683,192152,192542,192971,193373,193909,194835,195247,195647,196034,196406,196844,197248,198356,198756,200078,200573,201098,201488,201879,202276,202652,203081,203493,203913,204293,204681,205054,205428,205822,206227,206602,207316,207695,208499,211070,212129,226112,231972,237165,237515,239369,240747,241002,241661,242667,243048,243400,244199,246097,246450,246826,247195,247909,248344,250137,250408,250692,251862,252217,252988,254109,255200,255527,255794,256708,257058,258608,258836,262348,262966,263696,265060,266392,267387,267910,272475,272813,273383,275126,277540,
#Deleted in new
chr2	178527992	178538770	chr2:178527992-178538770	1	+	178527992	178527992	8553170	4	491,97,88,73,	0,7739,9611,10705,
#Deleted in new
chr2	178528356	178531559	chr2:178528356-178531559	0	+	178528356	178528356	8553170	3	127,90,246,	0,367,2957,
#Deleted in new
chr2	178528610	178531578	chr2:178528610-178531578	0	+	178528610	178528610	8553170	2	726,265,	0,2703,
#Deleted in new
chr2	178528739	178538918	chr2:178528739-178538918	0	+	178528739	178528739	8553170	4	74,97,331,221,	0,6992,8621,9958,
#Deleted in new
chr2	178528739	178538903	chr2:178528739-178538903	0	+	178528739	178528739	8553170	5	74,52,97,331,206,	0,545,6992,8621,9958,
#Partially deleted in new
chr2	178528739	178604802	chr2:178528739-178604802	1	+	178528739	178528739	8553170	7	74,150,176,86,157,110,75,	0,42560,62399,68856,70854,71818,75988,
#Partially deleted in new
chr2	178528739	178584816	chr2:178528739-178584816	0	+	178528739	178528739	8553170	5	74,140,135,125,244,	0,13482,53832,54784,55833,
#Deleted in new
chr2	178528739	178538829	chr2:178528739-178538829	0	+	178528739	178528739	8553170	6	74,265,97,87,88,132,	0,2574,6992,8621,8864,9958,
#Deleted in new
chr2	178528739	178537127	chr2:178528739-178537127	0	+	178528739	178528739	8553170	5	74,265,97,129,249,	0,2574,6992,7594,8139,
#Deleted in new
chr2	178528739	178538903	chr2:178528739-178538903	1	+	178528739	178528739	8553170	6	74,52,97,87,88,206,	0,545,6992,8621,8864,9958,
#Deleted in new
chr2	178528739	178538855	chr2:178528739-178538855	0	+	178528739	178528739	8553170	6	74,265,97,129,88,158,	0,2574,6992,7594,8864,9958,
#Deleted in new
chr2	178528739	178537077	chr2:178528739-178537077	0	+	178528739	178528739	8553170	4	74,265,97,199,	0,2574,6992,8139,
#Partially deleted in new
chr2	178528739	178644501	chr2:178528739-178644501	0	+	178528739	178528739	8553170	6	74,125,86,110,125,208,	0,54784,68856,71818,107834,115554,
#Deleted in new
chr2	178528739	178537600	chr2:178528739-178537600	0	+	178528739	178528739	8553170	4	74,97,350,240,	0,6992,8139,8621,
#Deleted in new
chr2	178528739	178537458	chr2:178528739-178537458	1	+	178528739	178528739	8553170	5	74,97,129,350,98,	0,6992,7594,8139,8621,
#Partially deleted in new
chr2	178528739	178597900	chr2:178528739-178597900	0	+	178528739	178528739	8553170	6	74,97,88,63,140,305,	0,6992,8864,11367,13482,68856,
#Deleted in new
chr2	178528739	178538903	chr2:178528739-178538903	0	+	178528739	178528739	8553170	5	74,97,88,130,206,	0,6992,8864,9490,9958,
#Deleted in new
chr2	178528739	178538727	chr2:178528739-178538727	0	+	178528739	178528739	8553170	5	74,265,97,331,30,	0,2574,6992,8621,9958,
#Partially deleted in new
chr2	178528739	178713989	chr2:178528739-178713989	0	+	178528739	178528739	8553170	4	74,176,86,236,	0,62399,68856,185014,
#Partially deleted in new
chr2	178528739	178633078	chr2:178528739-178633078	0	+	178528739	178528739	8553170	3	74,86,704,	0,68856,103635,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	178528764	178738038	chr2:178528764-178738038	0	+	178528764	178528764	8553170	6	49,86,126,145,122,105,	0,68831,205739,206963,208557,209169,
#Partially deleted in new
chr2	178528764	178620148	chr2:178528764-178620148	0	+	178528764	178528764	8553170	5	49,86,110,52,396,	0,68831,71793,86558,90988,
#Partially deleted in new
chr2	178528764	178632436	chr2:178528764-178632436	0	+	178528764	178528764	8553170	5	49,176,86,110,62,	0,62374,68831,71793,103610,
#Partially deleted in new
chr2	178528764	178645862	chr2:178528764-178645862	1	+	178528764	178528764	8553170	5	49,125,144,208,136,	0,107809,112536,115529,116962,
#Deleted in new
chr2	178530814	178531565	chr2:178530814-178531565	0	+	178530814	178530814	8553170	2	246,252,	0,499,
#Deleted in new
chr2	178537386	178538904	chr2:178537386-178538904	0	+	178537386	178537386	8553170	3	144,88,207,	0,217,1311,
#Partially deleted in new
chr2	178537670	178714053	chr2:178537670-178714053	0	+	178537670	178537670	8553170	5	21,176,86,110,300,	0,53468,59925,62887,176083,
#Partially deleted in new
chr2	178539804	178576557	chr2:178539804-178576557	1	+	178539804	178539804	8553170	6	174,63,140,150,214,578,	0,302,2417,31495,35308,36175,
#Partially deleted in new
chr2	178540115	178582663	chr2:178540115-178582663	0	+	178540115	178540115	8553170	4	54,140,150,92,	0,2106,31184,42456,
#Deleted in new
chr2	178541124	178541799	chr2:178541124-178541799	3	+	178541124	178541124	8553170	1	675,	0,
#Partially deleted in new
chr2	178541746	178597681	chr2:178541746-178597681	0	+	178541746	178541746	8553170	2	615,86,	0,55849,
#Deleted in new
chr2	178548883	178550681	chr2:178548883-178550681	3	+	178548883	178548883	8553170	1	1798,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	178554560	178558966	chr2:178554560-178558966	3	+	178554560	178554560	8553170	1	4406,	0,
#Deleted in new
chr2	178577102	178577622	chr2:178577102-178577622	3	+	178577102	178577102	8553170	1	520,	0,
#Deleted in new
chr2	178578789	178580906	chr2:178578789-178580906	3	+	178578789	178578789	8553170	1	2117,	0,
#Partially deleted in new
chr2	178584572	178591298	chr2:178584572-178591298	1	+	178584572	178584572	8553170	3	421,231,160,	0,2038,6566,
#Partially deleted in new
chr2	178584573	178632436	chr2:178584573-178632436	0	+	178584573	178584573	8553170	3	420,86,62,	0,13022,47801,
#Partially deleted in new
chr2	178584669	178599717	chr2:178584669-178599717	0	+	178584669	178584669	8553170	4	324,176,86,124,	0,6469,12926,14924,
#Partially deleted in new
chr2	178584833	178600572	chr2:178584833-178600572	0	+	178584833	178584833	8553170	4	160,86,157,15,	0,12762,14760,15724,
#Partially deleted in new
chr2	178591146	178614060	chr2:178591146-178614060	0	+	178591146	178591146	8553170	6	168,86,157,110,100,26,	0,6449,8447,9411,17020,22888,
#Partially deleted in new
chr2	178591157	178614275	chr2:178591157-178614275	1	+	178591157	178591157	8553170	5	157,86,157,110,241,	0,6438,8436,9400,22877,
#Partially deleted in new
chr2	178597595	178713829	chr2:178597595-178713829	0	+	178597595	178597595	8553170	3	86,125,76,	0,38978,116158,
#Partially deleted in new
chr2	178600557	178694645	chr2:178600557-178694645	1	+	178600557	178600557	8553170	7	110,208,176,113,175,157,138,	0,43736,74544,75435,76942,77865,93950,
#Deleted in new
chr2	178608201	178620221	chr2:178608201-178620221	1	+	178608201	178608201	8553170	4	65,100,139,480,	0,5010,5833,11540,
#Deleted in new
chr2	178616580	178617123	chr2:178616580-178617123	3	+	178616580	178616580	8553170	1	543,	0,
#Deleted in new
chr2	178618857	178620217	chr2:178618857-178620217	0	+	178618857	178618857	8553170	1	1360,	0,
#Partially deleted in new
chr2	178636559	178645923	chr2:178636559-178645923	0	+	178636559	178636559	8553170	3	139,208,197,	0,7734,9167,
#Partially deleted in new
chr2	178636574	178714238	chr2:178636574-178714238	0	+	178636574	178636574	8553170	2	124,485,	0,77179,
#Partially deleted in new
chr2	178636751	178702520	chr2:178636751-178702520	0	-	178636751	178702520	789624	32	48,90,63,90,75,81,78,96,84,84,84,78,207,84,84,81,84,84,84,81,87,78,78,63,405,48,72,84,60,27,78,67,	0,2947,3296,3789,4489,5485,36881,37562,41373,41662,41995,44909,45945,52301,52538,52763,53061,55264,55745,56857,57170,57847,58077,58596,59113,60369,62091,64368,64776,65288,65416,65702,
#Partially deleted in new
chr2	178639771	178651520	chr2:178639771-178651520	0	-	178639771	178651520	789624	10	17,63,90,69,111,78,108,84,78,68,	0,276,769,4776,6148,10045,10392,10979,11471,11681,
#Partially deleted in new
chr2	178640076	178651516	chr2:178640076-178651516	0	-	178640076	178651516	789624	14	34,90,69,111,75,81,84,84,78,78,108,84,78,64,	0,464,4471,5843,6408,6987,7304,9171,9477,9740,10087,10674,11166,11376,
#Deleted in new
chr2	178644716	178645179	chr2:178644716-178645179	3	+	178644716	178644716	8553170	1	463,	0,
#Deleted in new
chr2	178663626	178667307	chr2:178663626-178667307	0	-	178663626	178667307	789624	9	84,84,84,78,84,75,84,78,72,	0,192,388,833,1027,1225,1750,3197,3609,
#Deleted in new
chr2	178669624	178672418	chr2:178669624-178672418	0	-	178669624	178672418	789624	5	51,78,81,297,12,	0,593,1465,2346,2782,
#Deleted in new
chr2	178723456	178727046	chr2:178723456-178727046	3	+	178723456	178723456	8553170	1	3590,	0,
#Partially deleted in new
chr2	178732936	178742970	chr2:178732936-178742970	1	+	178732936	178732936	8553170	6	121,194,126,145,360,90,	0,701,1567,2791,4997,9944,
#Partially deleted in new
chr2	178738140	178764282	chr2:178738140-178764282	0	+	178738140	178738140	8553170	6	153,90,57,54,75,97,	0,4740,18125,20850,22799,26045,
#Deleted in new
chr2	178738223	178744437	chr2:178738223-178744437	0	+	178738223	178738223	8553170	3	70,90,35,	0,4657,6179,
#Partially deleted in new
chr2	178744404	178807421	chr2:178744404-178807421	1	-	178745584	178804642	0	46	7635,57,189,126,285,232,166,142,261,261,261,264,261,261,264,273,267,282,1694,169,165,272,245,234,206,143,216,64,259,66,282,123,294,138,138,138,126,138,153,331,245,86,288,204,104,210,	0,8719,14579,19772,20122,21976,23354,23609,24268,25274,25655,26007,26806,28704,29057,29433,29802,30516,30951,32744,33015,33299,34469,34824,35595,36716,37807,38134,38401,39315,39665,41215,41443,44955,45573,46303,47667,48999,49994,50517,55082,55420,55990,57733,60147,62807,
#Partially deleted in new
chr2	178744778	178764612	chr2:178744778-178764612	1	+	178744778	178744778	8553170	5	64,57,54,75,427,	0,11487,14212,16161,19407,
#Partially deleted in new
chr2	178753360	178767825	chr2:178753360-178767825	0	-	178753845	178767825	789624	6	649,189,126,285,232,67,	0,5623,10816,11166,13020,14398,
#Partially deleted in new
chr2	178758753	178774319	chr2:178758753-178774319	0	+	178758753	178758753	8553170	5	291,87,183,61,93,	0,2186,5432,14521,15473,
#Deleted in new
chr2	178772946	178774675	chr2:178772946-178774675	1	+	178772946	178772946	8553170	2	389,449,	0,1280,
#Deleted in new
chr2	178774227	178779963	chr2:178774227-178779963	1	+	178774227	178774227	8553170	4	288,146,44,126,	0,3630,4484,5610,
#Deleted in new
chr2	178776925	178779963	chr2:178776925-178779963	0	+	178776925	178776925	789624	2	1830,126,	0,2912,
#Partially deleted in new
chr2	178786088	178794954	chr2:178786088-178794954	0	-	178786088	178794954	789624	6	53,138,126,138,153,33,	0,3271,5983,7315,8310,8833,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	178798494	178807408	chr2:178798494-178807408	0	-	178798494	178798494	8553170	6	1237,86,288,204,104,197,	0,1330,1900,3643,6057,8717,
#Partially deleted in new
chr2	178802286	178830802	chr2:178802286-178830802	0	-	178802286	178804642	789624	5	55,104,155,183,138,	0,2265,15239,23026,28378,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr2	178829756	179050063	chr2:178829756-179050063	3	-	178834172	179049941	789624	24	4684,851,117,113,184,195,141,150,180,189,126,180,180,192,120,142,173,195,117,254,109,192,123,224,	0,7137,15869,20292,23684,25590,26500,36010,38269,39360,41670,42376,48207,55144,56995,58770,75572,88956,114778,131473,145300,148727,217527,220083,
#Partially deleted in new
chr2	178830268	178837137	chr2:178830268-178837137	0	-	178830268	178830268	8553170	2	527,244,	0,6625,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	178831370	178831449	chr2:178831370-178831449	3	-	178831370	178831370	8553170	1	79,	0,
#Partially deleted in new
chr2	178835755	178884951	chr2:178835755-178884951	0	-	178836865	178884951	789624	13	1989,117,113,184,195,141,150,180,189,126,180,180,51,	0,9870,14293,17685,19591,20501,30011,32270,33361,35671,36377,42208,49145,
#Partially deleted in new
chr2	178872132	179050086	chr2:178872132-179050086	0	-	178872132	179049941	789624	12	180,180,192,120,142,173,117,254,109,192,123,247,	0,5831,12768,14619,16394,33196,72402,89097,102924,106351,175151,177707,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	178873020	179050059	chr2:178873020-179050059	1	-	178877903	179049941	789624	12	5123,192,120,142,173,195,117,254,109,192,123,220,	0,11880,13731,15506,32308,45692,71514,88209,102036,105463,174263,176819,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	178915750	178926665	chr2:178915750-178926665	0	-	178915750	178915750	8553170	3	57,195,154,	0,2962,10761,
#Partially deleted in new
chr2	179001755	179002760	chr2:179001755-179002760	7	+	179001755	179001755	16724991	2	66,639,	0,366,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr2	179101691	179264790	chr2:179101691-179264790	3	-	179109898	179191841	789624	18	8337,122,192,123,82,160,115,195,123,212,56,98,114,114,91,109,80,292,	0,11032,13373,14976,15840,20078,22023,22672,30612,41900,44710,47605,49586,70428,74756,81388,90095,162807,
#Partially deleted in new
chr2	179109321	179124467	chr2:179109321-179124467	0	-	179116619	179124467	789624	8	707,122,192,217,82,160,115,104,	0,3402,5743,7252,8210,12448,14393,15042,
#Partially deleted in new
chr2	179109351	179149381	chr2:179109351-179149381	0	-	179121928	179149381	789624	10	677,122,192,123,82,160,18,160,56,85,	0,3372,5713,7316,8180,12418,14363,34292,37050,39945,
#Partially deleted in new
chr2	179121793	179146459	chr2:179121793-179146459	0	-	179121839	179146459	789624	5	136,195,123,212,58,	0,2570,10510,21798,24608,
#Partially deleted in new
chr2	179132044	179146459	chr2:179132044-179146459	0	-	179132044	179132044	8553170	3	382,212,58,	0,11547,14357,
#Partially deleted in new
chr2	179151322	179264273	chr2:179151322-179264273	0	-	179151322	179191841	789624	6	69,114,91,109,80,156,	0,20797,25125,31757,40464,112795,
#Partially deleted in new
chr2	179151331	179264203	chr2:179151331-179264203	0	-	179151331	179191841	789624	6	60,114,91,109,80,227,	0,20788,25116,31748,40455,112645,
#Partially deleted in new
chr2	179162482	179191866	chr2:179162482-179191866	0	-	179162482	179162482	8553170	5	29,114,91,109,80,	0,9637,13965,20597,29304,
#Partially deleted in new
chr2	179174405	179264625	chr2:179174405-179264625	0	-	179174431	179191841	789624	5	53,91,109,80,127,	0,2042,8674,17381,90093,
#Partially deleted in new
chr2	179273830	179285707	chr2:179273830-179285707	3	+	179273830	179273830	8553170	2	298,254,	0,11623,
#Partially deleted in new
chr2	179399727	179400875	chr2:179399727-179400875	7	-	179399727	179399727	16724991	1	1148,	0,
#Partially deleted in new
chr2	179441981	179861505	chr2:179441981-179861505	1	-	179443249	179769800	789624	10	1487,102,179,246,163,111,143,300,152,405,	0,2894,3568,4543,41290,76546,102845,327521,328539,419119,
#Partially deleted in new
chr2	179441992	179562588	chr2:179441992-179562588	1	-	179443249	179544916	789624	8	1476,102,179,246,163,111,143,190,	0,2883,3557,4532,41279,76535,102834,120406,
#Partially deleted in new
chr2	179441992	179746042	chr2:179441992-179746042	1	-	179443249	179745737	789624	8	1476,102,179,246,163,111,143,330,	0,2883,3557,4532,41279,76535,102834,303720,
#Partially deleted in new
chr2	179442550	179584069	chr2:179442550-179584069	1	-	179443249	179544916	789624	9	918,102,179,246,163,111,143,152,95,	0,2325,2999,3974,40721,75977,102276,133565,141424,
#Partially deleted in new
chr2	179443249	179769755	chr2:179443249-179769755	3	-	179443249	179769755	789624	8	219,102,179,246,163,111,143,253,	0,1626,2300,3275,40022,75278,101577,326253,
#Partially deleted in new
chr2	179445549	179637326	chr2:179445549-179637326	0	-	179445549	179544916	789624	6	179,246,163,111,143,114,	0,975,37722,72978,99277,191663,
#Partially deleted in new
chr2	179445607	179562620	chr2:179445607-179562620	0	-	179445607	179445607	8553170	5	121,246,111,143,222,	0,917,72920,99219,116791,
#Partially deleted in new
chr2	179446633	179745854	chr2:179446633-179745854	0	-	179446633	179446633	8553170	4	137,163,111,142,	0,36638,71894,299079,
#Partially deleted in new
chr2	179480893	179536503	chr2:179480893-179536503	0	-	179480893	179480893	8553170	4	263,163,111,168,	0,2378,37634,55442,
#Partially deleted in new
chr2	179483319	179584067	chr2:179483319-179584067	0	-	179483319	179583981	789624	5	115,111,39,143,93,	0,35208,39562,61507,100655,
#Partially deleted in new
chr2	179544826	179660182	chr2:179544826-179660182	0	-	179544826	179544826	8553170	2	143,106,	0,115250,
#Partially deleted in new
chr2	179769529	179802671	chr2:179769529-179802671	0	-	179769529	179769800	789624	3	273,152,140,	0,991,33002,
#Partially deleted in new
chr2	179769661	179796319	chr2:179769661-179796319	0	-	179769661	179769800	789624	3	141,152,111,	0,859,26547,
#Deleted in new
chr2	179814250	179814675	chr2:179814250-179814675	7	+	179814250	179814250	16724991	1	425,	0,
#Deleted in new
chr2	179860835	179860908	chr2:179860835-179860908	3	-	179860835	179860835	5263520	1	73,	0,
#Deleted in new
chr2	179934400	179934538	chr2:179934400-179934538	3	-	179934400	179934400	8553170	1	138,	0,
#Deleted in new
chr2	179934401	179934527	chr2:179934401-179934527	3	-	179934401	179934401	8553170	1	126,	0,
#Partially deleted in new
chr2	179944875	180007053	chr2:179944875-180007053	3	-	179945128	179993341	0	20	840,221,102,128,153,78,61,82,105,63,207,136,54,169,129,246,111,68,140,187,	0,5636,5949,7595,9329,10081,14146,19671,21002,25625,25774,26065,28317,28758,33314,36876,41819,43701,48439,61991,
#Partially deleted in new
chr2	179945620	180007113	chr2:179945620-180007113	0	-	179945620	179993341	789624	20	95,221,102,128,153,78,61,82,105,63,207,136,54,169,129,246,111,68,140,44,	0,4891,5204,6850,8584,9336,13401,18926,20257,24880,25029,25320,27572,28013,32569,36131,41074,42956,47694,61449,
#Deleted in new
chr2	180473136	180473419	chr2:180473136-180473419	7	-	180473136	180473136	16724991	1	283,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	180571711	180692454	chr2:180571711-180692454	3	-	180571711	180571711	8553170	4	120,174,43,225,	0,29022,30717,120518,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	180692103	180916939	chr2:180692103-180916939	3	+	180692103	180692103	789624	5	338,95,267,69,667,	0,32492,135137,207546,224169,
#Deleted in new
chr2	180801226	180801533	chr2:180801226-180801533	3	+	180801226	180801226	8553170	1	307,	0,
#Partially deleted in new
chr2	180872866	180873414	chr2:180872866-180873414	7	-	180872866	180872866	16724991	1	548,	0,
#Deleted in new
chr2	180938829	180939298	chr2:180938829-180939298	7	-	180938829	180938829	16724991	1	469,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	180967247	181060812	chr2:180967247-181060812	0	+	180982042	181060812	789624	5	103,219,51,133,148,	0,14770,16795,90445,93417,
#Deleted in new
chr2	180979426	180980090	chr2:180979426-180980090	3	-	180979426	180979426	8553170	2	240,25,	0,639,
#Partially deleted in new
chr2	180980372	181063029	chr2:180980372-181063029	1	+	180982042	181062888	789624	7	87,32,219,51,133,148,239,	0,569,1645,3670,77320,80292,82418,
#Partially deleted in new
chr2	180980375	181060810	chr2:180980375-181060810	0	+	180982042	181060810	789624	6	171,32,219,51,133,146,	0,566,1642,3667,77317,80289,
#Partially deleted in new
chr2	180980384	181063424	chr2:180980384-181063424	3	+	180982042	181062888	789624	6	162,219,51,133,148,634,	0,1633,3658,77308,80280,82406,
#Partially deleted in new
chr2	180980390	181062849	chr2:180980390-181062849	0	+	180982042	181060810	789624	6	156,219,51,133,148,59,	0,1627,3652,77302,80274,82400,
#Partially deleted in new
chr2	180980605	181063441	chr2:180980605-181063441	1	+	180982042	181062888	789624	6	368,219,51,133,148,651,	0,1412,3437,77087,80059,82185,
#Partially deleted in new
chr2	180980806	180990046	chr2:180980806-180990046	1	+	180982042	180989972	789624	4	167,219,51,165,	0,1211,3236,9075,
#Partially deleted in new
chr2	180981035	181057816	chr2:180981035-181057816	0	+	180982042	181057816	789624	4	350,219,51,124,	0,982,3007,76657,
#Partially deleted in new
chr2	180981123	181063441	chr2:180981123-181063441	1	+	180982042	181062888	789624	6	354,219,51,133,148,651,	0,894,2919,76569,79541,81667,
#Partially deleted in new
chr2	180982017	181076232	chr2:180982017-181076232	0	+	180982017	180982017	8553170	4	219,51,33,37,	0,2025,93478,94178,
#Partially deleted in new
chr2	180982022	180990005	chr2:180982022-180990005	1	+	180982042	180989972	789624	4	214,51,57,124,	0,2020,5315,7859,
#Partially deleted in new
chr2	180984005	181062920	chr2:180984005-181062920	0	+	180984005	180984005	8553170	4	88,133,148,130,	0,73687,76659,78785,
#Partially deleted in new
chr2	181057690	181076478	chr2:181057690-181076478	0	+	181057690	181057690	8553170	4	135,148,251,280,	0,2974,5100,18508,
#Partially deleted in new
chr2	181062889	181076585	chr2:181062889-181076585	0	+	181062889	181062889	8553170	3	152,33,387,	0,12606,13309,
#Partially deleted in new
chr2	181076050	181105968	chr2:181076050-181105968	3	-	181076050	181076050	8553170	6	388,87,107,78,57,116,	0,487,21431,27428,27950,29802,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	181086075	181123980	chr2:181086075-181123980	1	+	181086075	181086075	8553170	7	387,78,242,115,33,76,49,	0,772,9637,11429,22821,25906,37856,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	181101931	181192053	chr2:181101931-181192053	0	+	181101931	181101931	8553170	5	101,33,76,49,132,	0,6965,10050,22000,89990,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	181123836	181409321	chr2:181123836-181409321	3	+	181123836	181123836	789624	5	144,65,149,232,10943,	0,102634,138992,238850,274542,
#Deleted in new
chr2	181305592	181305652	chr2:181305592-181305652	3	-	181305592	181305592	5263520	1	60,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	181422153	181425749	chr2:181422153-181425749	3	-	181422153	181422153	8553170	2	239,294,	0,3302,
#Deleted in new
chr2	181457201	181459391	chr2:181457201-181459391	0	+	181457201	181457201	8553170	2	650,1196,	0,994,
#Partially deleted in new
chr2	181457206	181476218	chr2:181457206-181476218	1	+	181457654	181475851	0	5	645,122,107,130,399,	0,989,17753,17952,18613,
#Partially deleted in new
chr2	181457224	181536187	chr2:181457224-181536187	3	+	181457654	181535527	0	28	627,122,107,130,68,130,86,63,138,112,95,91,46,155,155,150,77,151,96,80,90,91,108,126,120,99,120,756,	0,971,17735,17934,21532,22912,24373,25135,25289,28656,36100,37497,38146,38558,41398,52433,54474,64966,66212,66946,67977,70072,72316,73299,74432,77047,77591,78207,
#Partially deleted in new
chr2	181457403	181486309	chr2:181457403-181486309	0	+	181457403	181457403	8553170	10	448,122,107,130,68,130,86,63,138,429,	0,792,17556,17755,21353,22733,24194,24956,25110,28477,
#Partially deleted in new
chr2	181457427	181509805	chr2:181457427-181509805	0	+	181457654	181509805	789624	16	424,122,107,130,68,130,86,63,138,112,95,91,46,155,155,148,	0,768,17532,17731,21329,22709,24170,24932,25086,28453,35897,37294,37943,38355,41195,52230,
#Partially deleted in new
chr2	181457712	181475290	chr2:181457712-181475290	0	+	181457712	181457712	8553170	3	139,122,331,	0,483,17247,
#Partially deleted in new
chr2	181458240	181479716	chr2:181458240-181479716	0	+	181458240	181458240	8553170	3	77,107,960,	0,16719,20516,
#Deleted in new
chr2	181493033	181495832	chr2:181493033-181495832	0	+	181493033	181493033	8553170	4	386,91,46,50,	0,1688,2337,2749,
#Partially deleted in new
chr2	181498280	181511771	chr2:181498280-181511771	0	+	181498280	181498280	8553170	3	497,150,73,	0,11377,13418,
#Partially deleted in new
chr2	181498571	181527450	chr2:181498571-181527450	0	+	181498571	181498571	8553170	8	206,150,77,151,96,80,90,154,	0,11086,13127,23619,24865,25599,26630,28725,
#Deleted in new
chr2	181523334	181524365	chr2:181523334-181524365	0	+	181523334	181523334	8553170	2	198,195,	0,836,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	181536675	181657107	chr2:181536675-181657107	3	-	181538183	181657006	789624	13	1569,173,97,109,26,60,178,75,143,64,132,243,339,	0,2416,8024,10942,11146,11869,12004,12958,21890,29382,37077,67161,120093,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	181537404	181657107	chr2:181537404-181657107	1	-	181538183	181657006	789624	13	840,173,97,109,26,60,178,75,143,78,64,243,339,	0,1687,7295,10213,10417,11140,11275,12229,21161,28028,28653,66432,119364,
#Partially deleted in new
chr2	181538113	181657006	chr2:181538113-181657006	1	-	181538183	181657006	789624	10	131,173,97,109,26,60,178,75,243,238,	0,978,6586,9504,9708,10431,10566,11520,65723,118655,
#Partially deleted in new
chr2	181538183	181657006	chr2:181538183-181657006	1	-	181538183	181657006	789624	14	61,173,97,109,26,60,178,75,143,78,64,132,243,238,	0,908,6516,9434,9638,10361,10496,11450,20382,27249,27874,35569,65653,118585,
#Partially deleted in new
chr2	181538183	181657006	chr2:181538183-181657006	0	-	181558667	181657006	789624	12	61,173,97,109,26,60,178,75,143,132,243,238,	0,908,6516,9434,9638,10361,10496,11450,20382,35569,65653,118585,
#Partially deleted in new
chr2	181538183	181657006	chr2:181538183-181657006	1	-	181538183	181657006	789624	11	61,173,97,109,26,60,178,75,132,243,238,	0,908,6516,9434,9638,10361,10496,11450,35569,65653,118585,
#Partially deleted in new
chr2	181538183	181657024	chr2:181538183-181657024	0	-	181558667	181657006	789624	10	61,173,97,109,60,178,75,143,243,256,	0,908,6516,9434,10361,10496,11450,20382,65653,118585,
#Partially deleted in new
chr2	181538183	181657006	chr2:181538183-181657006	0	-	181558667	181657006	789624	11	61,173,97,109,26,60,178,75,143,243,238,	0,908,6516,9434,9638,10361,10496,11450,20382,65653,118585,
#Partially deleted in new
chr2	181538183	181657006	chr2:181538183-181657006	0	-	181538183	181538183	8553170	11	61,173,97,987,178,75,143,64,132,243,238,	0,908,6516,9434,10496,11450,20382,27874,35569,65653,118585,
#Partially deleted in new
chr2	181544727	181680665	chr2:181544727-181680665	0	-	181544727	181544727	8553170	11	69,109,26,60,178,75,143,64,132,243,236,	0,2890,3094,3817,3952,4906,13838,21330,29025,59109,135702,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	181558651	181650077	chr2:181558651-181650077	0	-	181558651	181558651	8553170	4	57,132,243,118,	0,15101,45185,91308,
#Partially deleted in new
chr2	181566057	181649736	chr2:181566057-181649736	0	-	181566057	181566057	8553170	4	64,132,243,157,	0,7695,37779,83522,
#Partially deleted in new
chr2	181566061	181657116	chr2:181566061-181657116	0	-	181566061	181566061	8553170	4	60,132,243,137,	0,7691,37775,90918,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	181603862	181680641	chr2:181603862-181680641	0	-	181603862	181603862	8553170	3	217,167,212,	0,13392,76567,
#Deleted in new
chr2	181673087	181680547	chr2:181673087-181680547	0	-	181673087	181673087	8553170	2	460,118,	0,7342,
#Deleted in new
chr2	181676466	181680876	chr2:181676466-181680876	3	-	181677789	181678860	789624	2	2405,447,	0,3963,
#Deleted in new
chr2	181683112	181685707	chr2:181683112-181685707	3	+	181683112	181683112	8553170	2	183,452,	0,2143,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	181690379	181693415	chr2:181690379-181693415	3	-	181690379	181690379	8553170	2	827,158,	0,2878,
#Partially deleted in new
chr2	181694441	181694900	chr2:181694441-181694900	7	+	181694441	181694441	16724991	1	459,	0,
#Deleted in new
chr2	181738605	181738715	chr2:181738605-181738715	3	+	181738605	181738605	8553170	1	110,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	181887850	181891663	chr2:181887850-181891663	3	-	181887850	181887850	8553170	1	3813,	0,
#Deleted in new
chr2	181891832	181894695	chr2:181891832-181894695	0	+	181891832	181891832	8553170	2	445,2081,	0,782,
#Partially deleted in new
chr2	181891887	181930738	chr2:181891887-181930738	1	+	181892066	181928265	789624	18	390,46,50,57,40,99,209,701,73,89,1212,78,128,151,66,465,118,1178,	0,727,4142,5020,6992,7126,8808,9878,18011,21957,23328,26710,26867,27408,28709,30060,36273,37673,
#Partially deleted in new
chr2	181891954	181930738	chr2:181891954-181930738	3	+	181892066	181929656	789624	17	323,46,50,57,40,99,209,701,73,89,1212,78,128,151,66,465,1178,	0,660,4075,4953,6925,7059,8741,9811,17944,21890,23261,26643,26800,27341,28642,29993,37606,
#Partially deleted in new
chr2	181891984	181930738	chr2:181891984-181930738	1	+	181892066	181928265	789624	17	293,46,50,57,40,99,209,701,73,89,1212,78,128,151,465,118,1178,	0,630,4045,4923,6895,7029,8711,9781,17914,21860,23231,26613,26770,27311,29963,36176,37576,
#Partially deleted in new
chr2	181892195	181930738	chr2:181892195-181930738	0	+	181896922	181899072	789624	18	82,46,50,57,40,99,209,701,73,89,1790,78,128,151,66,465,118,1178,	0,419,3834,4712,6684,6818,8500,9570,17703,21649,23020,26402,26559,27100,28401,29752,35965,37365,
#Partially deleted in new
chr2	181892195	181929784	chr2:181892195-181929784	0	+	181896922	181899072	789624	16	82,46,57,40,99,209,701,73,89,1212,78,128,151,465,118,224,	0,419,4712,6684,6818,8500,9570,17703,21649,23020,26402,26559,27100,29752,35965,37365,
#Deleted in new
chr2	181892352	181898919	chr2:181892352-181898919	0	+	181892352	181892352	8553170	5	26,46,50,57,40,	0,262,3677,4555,6527,
#Deleted in new
chr2	181892631	181893850	chr2:181892631-181893850	0	+	181892631	181892631	8553170	2	29,240,	0,979,
#Partially deleted in new
chr2	181893392	181930738	chr2:181893392-181930738	0	+	181896922	181899072	789624	17	353,50,57,40,99,209,701,73,89,1212,78,128,151,66,465,118,1178,	0,2637,3515,5487,5621,7303,8373,16506,20452,21823,25205,25362,25903,27204,28555,34768,36168,
#Deleted in new
chr2	181898858	181901974	chr2:181898858-181901974	0	+	181898858	181898858	8553170	4	61,99,209,209,	0,155,1837,2907,
#Partially deleted in new
chr2	181900860	181930738	chr2:181900860-181930738	0	+	181900860	181900860	8553170	11	44,701,73,89,3460,128,151,66,465,118,1178,	0,905,9038,12984,14355,17894,18435,19736,21087,27300,28700,
#Partially deleted in new
chr2	181910504	181930738	chr2:181910504-181930738	1	+	181910616	181928265	789624	10	125,89,1212,78,128,151,66,465,118,1178,	0,3340,4711,8093,8250,8791,10092,11443,17656,19056,
#Deleted in new
chr2	181916721	181919375	chr2:181916721-181919375	0	+	181916721	181916721	8553170	5	284,148,78,128,80,	0,1601,1876,2033,2574,
#Partially deleted in new
chr2	181918860	181929677	chr2:181918860-181929677	0	+	181918860	181918860	8553170	6	22,151,66,465,39,117,	0,435,1736,3087,9300,10700,
#Partially deleted in new
chr2	181920605	181929797	chr2:181920605-181929797	0	+	181920605	181929656	789624	3	45,465,237,	0,1342,8955,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	181954240	182117518	chr2:181954240-182117518	0	+	181954240	181954240	789624	5	394,46,38,61,312,	0,20978,107201,109490,162966,
#Partially deleted in new
chr2	181954491	182117516	chr2:181954491-182117516	0	+	181954491	181954491	8553170	7	143,63,46,61,38,61,310,	0,7642,20727,33347,106950,109239,162715,
#Partially deleted in new
chr2	181954495	182130166	chr2:181954495-182130166	0	+	181954495	181954495	8553170	5	139,46,38,61,1193,	0,20723,106946,109235,174478,
#Partially deleted in new
chr2	181954523	182129067	chr2:181954523-182129067	0	+	181954523	181954523	8553170	6	111,46,61,38,61,94,	0,20695,33315,106918,109207,174450,
#Partially deleted in new
chr2	181954530	182117685	chr2:181954530-182117685	0	+	181954530	181954530	8553170	6	104,63,46,38,61,479,	0,7603,20688,106911,109200,162676,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	181954558	182117444	chr2:181954558-182117444	0	+	181954558	181954558	8553170	6	76,46,92,38,61,238,	0,20660,69263,106883,109172,162648,
#Deleted in new
chr2	181961211	181962478	chr2:181961211-181962478	7	-	181961211	181961211	16724991	1	1267,	0,
#Partially deleted in new
chr2	181985867	182131398	chr2:181985867-182131398	3	+	181986110	182117295	789624	6	324,61,38,61,95,2425,	0,1971,75574,77863,131339,143106,
#Partially deleted in new
chr2	181985876	182130018	chr2:181985876-182130018	1	+	181986110	182117295	789624	6	315,82,38,61,95,1045,	0,1941,75565,77854,131330,143097,
#Partially deleted in new
chr2	181986021	182129538	chr2:181986021-182129538	1	+	181986110	182117295	789624	6	170,61,38,61,262,565,	0,1817,75420,77709,131185,142952,
#Deleted in new
chr2	182048821	182048905	chr2:182048821-182048905	7	+	182048821	182048821	16724991	1	84,	0,
#Deleted in new
chr2	182061462	182064123	chr2:182061462-182064123	0	+	182061462	182061462	8553170	2	17,393,	0,2268,
#Partially deleted in new
chr2	182103600	182117917	chr2:182103600-182117917	0	+	182103600	182103600	8553170	2	222,711,	0,13606,
#Partially deleted in new
chr2	182140035	182522577	chr2:182140035-182522577	3	-	182147078	182522376	0	15	3003,117,188,121,82,121,102,126,101,141,117,67,183,114,302,	0,7000,45856,46432,48943,61403,61652,65904,83828,89970,90979,94396,100074,124265,382240,
#Partially deleted in new
chr2	182147035	182427031	chr2:182147035-182427031	1	-	182147078	182426630	0	14	117,188,121,82,121,102,126,101,141,117,67,183,114,454,	0,38856,39432,41943,54403,54652,58904,76828,82970,83979,87396,93074,117265,279542,
#Partially deleted in new
chr2	182167886	182427048	chr2:182167886-182427048	1	-	182168246	182426630	0	14	404,188,121,82,121,102,126,101,141,117,67,183,114,471,	0,18005,18581,21092,33552,33801,38053,55977,62119,63128,66545,72223,96414,258691,
#Partially deleted in new
chr2	182167886	182242063	chr2:182167886-182242063	1	-	182168246	182241914	0	13	404,188,121,82,121,102,126,101,141,117,67,183,262,	0,18005,18581,21092,33552,33801,38053,55977,62119,63128,66545,72223,73915,
#Partially deleted in new
chr2	182167938	182522738	chr2:182167938-182522738	1	-	182168246	182522376	0	15	352,188,121,82,121,102,126,101,141,117,67,183,114,111,74,	0,17953,18529,21040,33500,33749,38001,55925,62067,63076,66493,72171,96362,354337,354726,
#Partially deleted in new
chr2	182223931	182241986	chr2:182223931-182241986	0	-	182223931	182223931	8553170	6	33,141,117,67,183,185,	0,6074,7083,10500,16178,17870,
#Partially deleted in new
chr2	182231062	182522312	chr2:182231062-182522312	0	-	182231062	182231062	8553170	6	69,67,183,114,62,37,	0,3369,9047,33238,232535,291213,
#Partially deleted in new
chr2	182234431	182523106	chr2:182234431-182523106	0	-	182234431	182234431	8553170	5	67,183,114,111,78,	0,5678,29869,287844,288597,
#Partially deleted in new
chr2	182234431	182523192	chr2:182234431-182523192	0	-	182234431	182234431	8553170	5	67,183,114,111,90,	0,5678,29869,287844,288671,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	182314283	182314544	chr2:182314283-182314544	3	+	182314283	182314283	8553170	1	261,	0,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr2	182716040	182780025	chr2:182716040-182780025	1	+	182718086	182777132	789624	23	443,57,350,163,51,83,132,94,78,44,90,114,115,128,117,102,156,134,54,148,120,105,2905,	0,975,1900,3966,5984,12535,12822,13807,14989,16458,24258,25202,27557,35617,36031,38962,40273,41651,42796,43119,46641,59275,61080,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr2	182716271	182794464	chr2:182716271-182794464	3	+	182718086	182777132	789624	24	212,57,350,163,51,83,132,94,78,44,138,90,114,115,128,117,102,156,134,54,148,120,105,17344,	0,744,1669,3735,5753,12304,12591,13576,14758,16227,19977,24027,24971,27326,35386,35800,38731,40042,41420,42565,42888,46410,59044,60849,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr2	182716295	182777464	chr2:182716295-182777464	0	+	182716295	182716295	789624	25	188,57,350,163,51,83,132,94,78,44,138,844,114,115,128,117,103,102,156,134,54,148,120,105,344,	0,720,1645,3711,5729,12280,12567,13552,14734,16203,19953,23249,24947,27302,35362,35776,38407,38707,40018,41396,42541,42864,46386,59020,60825,
#Partially deleted in new
chr2	182716329	182730542	chr2:182716329-182730542	1	+	182718086	182730542	789624	8	154,57,350,163,51,83,21,9,	0,686,1611,3677,5695,12246,12533,14204,
#Partially deleted in new
chr2	182716426	182728658	chr2:182716426-182728658	0	+	182716426	182716426	8553170	6	57,57,134,163,51,83,	0,589,1730,3580,5598,12149,
#Partially deleted in new
chr2	182718066	182740206	chr2:182718066-182740206	1	+	182718086	182739556	789624	10	224,163,51,83,132,94,78,44,138,662,	0,1940,3958,10509,10796,11781,12963,14432,18182,21478,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr2	182718086	182777845	chr2:182718086-182777845	0	+	182718086	182740321	789624	21	204,163,51,83,132,94,78,90,114,115,128,117,75,102,156,134,54,148,120,105,725,	0,1920,3938,10489,10776,11761,12943,22212,23156,25511,33571,33985,34462,36916,38227,39605,40750,41073,44595,57229,59034,
#Partially deleted in new
chr2	182718086	182775429	chr2:182718086-182775429	1	+	182718086	182757785	789624	10	204,163,51,83,21,52,54,148,120,114,	0,1920,3938,10489,10776,39687,40750,41073,44595,57229,
#Partially deleted in new
chr2	182720079	182729107	chr2:182720079-182729107	0	+	182720079	182720079	8553170	3	90,51,532,	0,1945,8496,
#Deleted in new
chr2	182729834	182732737	chr2:182729834-182732737	0	+	182729834	182729834	8553170	3	107,78,239,	0,1195,2664,
#Partially deleted in new
chr2	182729847	182740384	chr2:182729847-182740384	0	+	182729847	182739556	789624	6	94,78,44,138,165,86,	0,1182,2651,6401,9697,10451,
#Deleted in new
chr2	182788097	182788435	chr2:182788097-182788435	7	+	182788097	182788097	16724991	1	338,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	182828123	182828221	chr2:182828123-182828221	3	+	182828123	182828123	8553170	1	98,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	182833274	182867162	chr2:182833274-182867162	3	-	182834848	182866552	789624	6	1691,64,205,66,48,1088,	0,4673,5134,9203,25511,32800,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	182873840	182873947	chr2:182873840-182873947	3	+	182873840	182873840	8553170	1	107,	0,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr2	182909114	183038472	chr2:182909114-183038472	1	-	182925701	183038099	0	31	16704,90,110,117,94,81,83,94,98,131,219,132,140,120,133,146,59,82,133,107,97,57,157,49,138,91,143,57,93,111,481,	0,17701,19002,19668,21580,25637,26178,32955,43290,43678,43998,47347,48342,53044,55561,58101,67778,69719,72129,73706,74171,77056,79915,85724,86586,92838,93012,93859,94118,114691,128877,
#Partially deleted in new
chr2	182924876	183038858	chr2:182924876-183038858	3	-	182925701	183038099	0	32	942,90,110,117,94,81,83,94,98,131,219,132,140,120,133,146,59,82,133,107,97,57,157,49,138,91,143,57,93,111,18,867,	0,1939,3240,3906,5818,9875,10416,17193,27528,27916,28236,31585,32580,37282,39799,42339,52016,53957,56367,57944,58409,61294,64153,69962,70824,77076,77250,78097,78356,98929,100101,113115,
#Deleted in new
chr2	182925656	182927265	chr2:182925656-182927265	0	-	182925656	182925656	8553170	2	162,450,	0,1159,
#Partially deleted in new
chr2	182928118	182947162	chr2:182928118-182947162	0	-	182928118	182928118	8553170	7	108,117,94,81,83,94,136,	0,664,2576,6633,7174,13951,18908,
#Partially deleted in new
chr2	182930724	182942119	chr2:182930724-182942119	0	-	182930724	182930724	8553170	4	64,81,111,50,	0,4027,4540,11345,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	182934401	182935503	chr2:182934401-182935503	0	-	182934401	182934401	8553170	2	431,211,	0,891,
#Partially deleted in new
chr2	182953299	182957044	chr2:182953299-182957044	0	-	182953299	182953299	8553170	2	32,583,	0,3162,
#Partially deleted in new
chr2	182957140	182964764	chr2:182957140-182964764	0	-	182957140	182957140	8553170	3	456,120,89,	0,5018,7535,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	183022858	183022971	chr2:183022858-183022971	3	-	183022858	183022858	8553170	1	113,	0,
#Partially deleted in new
chr2	183064234	183064346	chr2:183064234-183064346	3	-	183064234	183064234	8553170	1	112,	0,
#Partially deleted in new
chr2	183071039	183072486	chr2:183071039-183072486	7	-	183071039	183071039	16724991	1	1447,	0,
#Partially deleted in new
chr2	183078558	183095899	chr2:183078558-183095899	1	+	183078933	183095658	0	3	601,47,469,	0,4949,16872,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	183078758	183100005	chr2:183078758-183100005	3	+	183078933	183095658	0	4	401,47,153,4575,	0,4749,8281,16672,
#Partially deleted in new
chr2	183078988	183095903	chr2:183078988-183095903	0	+	183078988	183078988	8553170	4	171,47,35,473,	0,4519,8169,16442,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	183083404	183108519	chr2:183083404-183108519	3	-	183083404	183083404	8553170	3	135,212,80,	0,24087,25035,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	183095422	183107703	chr2:183095422-183107703	1	-	183095422	183095422	8553170	2	170,212,	0,12069,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	183117512	183130487	chr2:183117512-183130487	0	+	183128297	183130487	789624	5	114,152,109,171,70,	0,1078,2493,10774,12905,
#Partially deleted in new
chr2	183117513	183161438	chr2:183117513-183161438	1	+	183128297	183161131	0	10	113,109,171,128,58,142,70,129,165,385,	0,2492,10773,12904,16052,33994,39930,40769,41974,43540,
#Partially deleted in new
chr2	183117513	183133623	chr2:183117513-183133623	0	+	183128297	183133623	789624	4	113,171,128,58,	0,10773,12904,16052,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	183117518	183120062	chr2:183117518-183120062	0	+	183117518	183117518	8553170	3	108,349,57,	0,1072,2487,
#Partially deleted in new
chr2	183117537	183128457	chr2:183117537-183128457	0	+	183128297	183128457	789624	3	89,82,171,	0,789,10749,
#Partially deleted in new
chr2	183124354	183161680	chr2:183124354-183161680	3	+	183124457	183161131	0	9	143,171,128,58,142,70,129,165,627,	0,3932,6063,9211,27153,33089,33928,35133,36699,
#Partially deleted in new
chr2	183124375	183131117	chr2:183124375-183131117	0	+	183124375	183124375	8553170	4	122,171,128,123,	0,3911,6042,6619,
#Partially deleted in new
chr2	183124411	183161244	chr2:183124411-183161244	0	+	183124457	183157505	789624	8	86,171,128,58,70,129,165,191,	0,3875,6006,9154,33032,33871,35076,36642,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	183124418	183161680	chr2:183124418-183161680	0	+	183124418	183124418	8553170	7	79,171,128,58,70,129,2193,	0,3868,5999,9147,33025,33864,35069,
#Partially deleted in new
chr2	183124457	183133623	chr2:183124457-183133623	0	+	183124457	183131066	789624	5	40,171,128,358,58,	0,3829,5960,6537,9108,
#Deleted in new
chr2	183214318	183215400	chr2:183214318-183215400	3	+	183214318	183214318	8553170	1	1082,	0,
#Deleted in new
chr2	183260641	183261046	chr2:183260641-183261046	7	+	183260641	183260641	16724991	1	405,	0,
#Deleted in new
chr2	183607441	183608119	chr2:183607441-183608119	7	-	183607441	183607441	16724991	1	678,	0,
#Partially deleted in new
chr2	183904528	183949112	chr2:183904528-183949112	3	+	183904528	183904528	8553170	3	103,129,241,	0,29844,44343,
#Partially deleted in new
chr2	184378974	184379044	chr2:184378974-184379044	3	+	184378974	184378974	5263520	1	70,	0,
#Partially deleted in new
chr2	184593576	184599008	chr2:184593576-184599008	3	-	184593576	184593576	8553170	3	2800,453,212,	0,4691,5220,
#Partially deleted in new
chr2	184598365	184939492	chr2:184598365-184939492	3	+	184598959	184939026	789624	4	705,144,131,3710,	0,268003,335237,337417,
#Partially deleted in new
chr2	184866364	184939489	chr2:184866364-184939489	1	+	184933602	184939026	789624	3	148,131,3707,	0,67238,69418,
#Deleted in new
chr2	184902110	184902562	chr2:184902110-184902562	7	-	184902110	184902110	16724991	1	452,	0,
#Deleted in new
chr2	185547134	185547818	chr2:185547134-185547818	7	-	185547134	185547134	16724991	1	684,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	185661773	185661906	chr2:185661773-185661906	3	+	185661773	185661773	8553170	1	133,	0,
#Partially deleted in new
chr2	185719873	185738721	chr2:185719873-185738721	3	-	185719873	185719873	789624	4	847,109,71,152,	0,9455,16188,18696,
#Partially deleted in new
chr2	185720211	185740479	chr2:185720211-185740479	0	-	185720211	185720211	789624	3	509,109,101,	0,9117,20167,
#Partially deleted in new
chr2	185736061	185739025	chr2:185736061-185739025	0	-	185736061	185736061	8553170	3	76,68,119,	0,2124,2845,
#Partially deleted in new
chr2	185738894	185833290	chr2:185738894-185833290	3	+	185738894	185833226	789624	23	99,126,162,90,140,142,111,121,87,116,46,107,64,58,37,8884,9437,498,101,47,44,70,201,	0,451,4238,5427,6534,7774,8418,14827,17297,22093,23077,24288,25607,43810,47357,49748,60802,74650,76476,85539,89261,92918,94195,
#Partially deleted in new
chr2	185739285	185743294	chr2:185739285-185743294	0	+	185739285	185739285	8553170	2	186,162,	0,3847,
#Partially deleted in new
chr2	185743182	185745067	chr2:185743182-185745067	0	+	185743182	185743182	8553170	2	112,746,	0,1139,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	185745539	185766549	chr2:185745539-185766549	0	+	185745539	185760989	789624	8	29,142,111,127,116,46,107,2048,	0,1129,1773,8182,15448,16432,17643,18962,
#Partially deleted in new
chr2	185783690	185800150	chr2:185783690-185800150	3	-	185783690	185783690	8553170	3	440,178,71,	0,5075,16389,
#Partially deleted in new
chr2	185788019	185800151	chr2:185788019-185800151	1	-	185788019	185788019	789624	3	190,178,72,	0,746,12060,
#Partially deleted in new
chr2	185794617	185833289	chr2:185794617-185833289	0	+	185794617	185813555	789624	7	2909,498,101,47,44,70,200,	0,18927,20753,29816,33538,37195,38472,
#Partially deleted in new
chr2	185806081	185833289	chr2:185806081-185833289	1	+	185806685	185808756	789624	9	1592,905,425,498,101,47,44,70,200,	0,1721,2627,7463,9289,18352,22074,25731,27008,
#Partially deleted in new
chr2	185956586	185957063	chr2:185956586-185957063	7	-	185956586	185956586	16724991	1	477,	0,
#Partially deleted in new
chr2	186032890	186083233	chr2:186032890-186083233	3	-	186032890	186032890	8553170	3	912,87,80,	0,48439,50263,
#Partially deleted in new
chr2	186033494	186081345	chr2:186033494-186081345	1	-	186033494	186033494	8553170	5	308,102,56,213,16,	0,4836,6005,25262,47835,
#Partially deleted in new
chr2	186033530	186083223	chr2:186033530-186083223	0	-	186033530	186033530	789624	5	272,102,56,87,70,	0,4800,5969,47799,49623,
#Partially deleted in new
chr2	186162948	186163245	chr2:186162948-186163245	7	-	186162948	186162948	16724991	1	297,	0,
#Partially deleted in new
chr2	186261418	186261919	chr2:186261418-186261919	7	-	186261418	186261418	16724991	1	501,	0,
#Deleted in new
chr2	186354569	186356773	chr2:186354569-186356773	3	-	186354569	186354569	8553170	1	2204,	0,
#Deleted in new
chr2	186364597	186365128	chr2:186364597-186365128	7	+	186364597	186364597	16724991	1	531,	0,
#Partially deleted in new
chr2	186486155	186509363	chr2:186486155-186509363	3	+	186486382	186508733	789624	10	302,102,112,153,92,183,147,102,124,821,	0,9077,14026,15117,16340,17876,19295,19584,20557,22387,
#Partially deleted in new
chr2	186486252	186506091	chr2:186486252-186506091	0	+	186486382	186504060	789624	6	205,102,112,183,147,352,	0,8980,13929,17779,19198,19487,
#Partially deleted in new
chr2	186486262	186501375	chr2:186486262-186501375	0	+	186486382	186500185	789624	5	195,102,44,112,103,	0,8970,13356,13919,15010,
#Partially deleted in new
chr2	186486266	186495319	chr2:186486266-186495319	0	+	186486266	186486266	8553170	2	191,113,	0,8940,
#Partially deleted in new
chr2	186486890	186504086	chr2:186486890-186504086	0	+	186486890	186486890	8553170	5	136,102,112,153,55,	0,8342,13291,14382,17141,
#Partially deleted in new
chr2	186486917	186504099	chr2:186486917-186504099	0	+	186486917	186486917	8553170	6	109,102,112,153,57,68,	0,8315,13264,14355,15578,17114,
#Partially deleted in new
chr2	186487269	186504070	chr2:186487269-186504070	0	+	186487269	186487269	8553170	6	91,102,112,153,57,39,	0,7963,12912,14003,15226,16762,
#Deleted in new
chr2	186488623	186489083	chr2:186488623-186489083	7	-	186488623	186488623	16724991	1	460,	0,
#Partially deleted in new
chr2	186505090	186508690	chr2:186505090-186508690	0	+	186505090	186505090	8553170	4	507,102,124,148,	0,649,1622,3452,
#Partially deleted in new
chr2	186506712	186509114	chr2:186506712-186509114	0	+	186506712	186508554	789624	3	124,80,572,	0,682,1830,
#Partially deleted in new
chr2	186590064	186680901	chr2:186590064-186680901	3	+	186590338	186677292	0	30	459,131,92,115,62,46,126,45,44,57,53,203,192,46,108,59,155,138,68,148,93,80,81,106,159,114,114,108,123,3705,	0,11956,32274,35408,40732,43264,46017,47000,48212,48344,50850,51321,56621,59775,61917,64585,66182,68973,73703,74429,75061,76639,77085,77606,78697,79636,85539,85755,86748,87132,
#Partially deleted in new
chr2	186590079	186680897	chr2:186590079-186680897	1	+	186590338	186677292	0	28	444,131,92,115,126,45,44,57,53,203,192,46,108,59,155,138,68,148,93,80,81,106,159,114,114,108,123,3701,	0,11941,32259,35393,46002,46985,48197,48329,50835,51306,56606,59760,61902,64570,66167,68958,73688,74414,75046,76624,77070,77591,78682,79621,85524,85740,86733,87117,
#Partially deleted in new
chr2	186600204	186677441	chr2:186600204-186677441	1	+	186600334	186677292	0	30	177,131,92,115,62,46,126,45,44,57,53,203,192,46,108,59,155,138,68,148,93,80,81,106,159,114,114,108,123,245,	0,1816,22134,25268,30592,33124,35877,36860,38072,38204,40710,41181,46481,49635,51777,54445,56042,58833,63563,64289,64921,66499,66945,67466,68557,69496,75399,75615,76608,76992,
#Partially deleted in new
chr2	186641338	186695287	chr2:186641338-186695287	3	-	186641338	186641338	8553170	3	352,88,131,	0,19155,53818,
#Deleted in new
chr2	186665125	186668020	chr2:186665125-186668020	0	+	186665125	186665125	8553170	4	93,80,81,350,	0,1578,2024,2545,
#Partially deleted in new
chr2	186667647	186675638	chr2:186667647-186675638	0	+	186667647	186667647	8553170	4	129,159,114,35,	0,1114,2053,7956,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	186668523	186669914	chr2:186668523-186669914	0	+	186668523	186668523	8553170	2	397,214,	0,1177,
#Deleted in new
chr2	186668844	186669957	chr2:186668844-186669957	0	+	186668844	186668844	8553170	2	76,257,	0,856,
#Partially deleted in new
chr2	186668876	186676283	chr2:186668876-186676283	0	+	186668876	186675957	789624	4	44,114,114,464,	0,824,6727,6943,
#Partially deleted in new
chr2	186693970	186765965	chr2:186693970-186765965	3	+	186694173	186762823	789624	8	441,234,93,159,171,117,124,4487,	0,46257,49512,53121,57163,59962,67142,67508,
#Partially deleted in new
chr2	186694079	186751257	chr2:186694079-186751257	1	+	186694173	186747245	789624	6	332,234,93,146,11,124,	0,46148,49403,53012,53160,57054,
#Partially deleted in new
chr2	186827834	186849170	chr2:186827834-186849170	3	-	186827983	186849130	0	9	956,154,113,85,249,211,41,77,205,	0,1892,5285,6111,9471,11124,16882,19884,21131,
#Partially deleted in new
chr2	186844752	186849208	chr2:186844752-186849208	0	-	186848884	186849130	789624	3	5,77,514,	0,2966,3942,
#Deleted in new
chr2	187001875	187003377	chr2:187001875-187003377	7	-	187001875	187001875	16724991	1	1502,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	187122561	187122861	chr2:187122561-187122861	3	-	187122561	187122561	8553170	1	300,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	187270697	187270804	chr2:187270697-187270804	3	-	187270697	187270697	8553170	1	107,	0,
#Partially deleted in new
chr2	187343128	187448460	chr2:187343128-187448460	1	-	187346183	187385595	789624	15	3271,42,219,67,61,154,127,92,113,111,133,87,165,91,422,	0,8791,8985,15934,16083,17469,20247,35811,37338,37548,40044,42416,44200,44537,104910,
#Partially deleted in new
chr2	187343128	187448460	chr2:187343128-187448460	3	-	187346183	187385595	789624	16	3271,42,219,67,61,154,127,92,113,111,133,87,165,91,68,422,	0,8791,8985,15934,16083,17469,20247,35811,37338,37548,40044,42416,44200,44537,88168,104910,
#Partially deleted in new
chr2	187345926	187448252	chr2:187345926-187448252	1	-	187346183	187385595	789624	14	473,42,219,67,61,154,127,92,113,111,133,87,91,214,	0,5993,6187,13136,13285,14671,17449,33013,34540,34750,37246,39618,41739,102112,
#Partially deleted in new
chr2	187380738	187448252	chr2:187380738-187448252	0	-	187380738	187385595	789624	6	49,133,87,91,68,214,	0,2434,4806,6927,50558,67300,
#Partially deleted in new
chr2	187383243	187448252	chr2:187383243-187448252	0	-	187383243	187385595	789624	5	62,87,137,91,214,	0,2301,4085,4422,64795,
#Partially deleted in new
chr2	187387337	187448252	chr2:187387337-187448252	0	-	187387337	187387337	8553170	5	156,91,68,59,214,	0,328,43959,49260,60701,
#Partially deleted in new
chr2	187387398	187448253	chr2:187387398-187448253	0	-	187387398	187387398	8553170	2	358,215,	0,60640,
#Partially deleted in new
chr2	187387665	187448252	chr2:187387665-187448252	0	-	187387665	187387665	8553170	5	91,68,59,137,214,	0,43631,48932,54257,60373,
#Deleted in new
chr2	187415551	187415818	chr2:187415551-187415818	7	+	187415551	187415551	16724991	1	267,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	187428336	187448146	chr2:187428336-187448146	0	-	187428336	187428336	8553170	3	553,68,108,	0,2960,19702,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	187464229	187513641	chr2:187464229-187513641	1	-	187466935	187503768	0	8	2813,180,93,177,39,198,123,26,	0,3523,19894,20581,24107,32651,39418,49386,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	187464260	187554492	chr2:187464260-187554492	3	-	187466935	187503768	0	8	2782,180,93,177,39,198,123,293,	0,3492,19863,20550,24076,32620,39387,89939,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	187467001	187519860	chr2:187467001-187519860	0	-	187467001	187467001	8553170	7	41,180,864,39,198,123,6245,	0,751,17122,21335,29879,36646,46614,
#Partially deleted in new
chr2	187478584	187554438	chr2:187478584-187554438	1	-	187478675	187503768	0	7	219,93,177,39,198,123,239,	0,5539,6226,9752,18296,25063,75615,
#Partially deleted in new
chr2	187483929	187496976	chr2:187483929-187496976	0	-	187483929	187483929	8553170	4	287,177,39,96,	0,881,4407,12951,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	187496880	187554351	chr2:187496880-187554351	0	-	187496880	187503768	789624	4	198,123,72,152,	0,6767,23661,57319,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	187496883	187554492	chr2:187496883-187554492	0	-	187496883	187503768	789624	4	195,123,122,293,	0,6764,32480,57316,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	187497015	187554461	chr2:187497015-187554461	0	-	187497015	187503768	789624	6	63,123,31,72,134,262,	0,6632,16600,23526,47488,57184,
#Deleted in new
chr2	187554148	187554663	chr2:187554148-187554663	0	+	187554148	187554148	8553170	3	43,118,87,	0,127,428,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	187712815	188287691	chr2:187712815-188287691	3	-	187712815	187712815	789624	4	64,116,155,225,	0,322780,452938,574651,
#Partially deleted in new
chr2	187825340	187826449	chr2:187825340-187826449	7	+	187825340	187825340	16724991	1	1109,	0,
#Duplicated in new
chr2	188139636	188384313	chr2:188139636-188384313	1	-	188139636	188139636	8553170	5	104,155,68,59,80,	0,26117,47349,49433,244597,
#Deleted in new
chr2	188227188	188228382	chr2:188227188-188228382	7	+	188227188	188227188	16724991	1	1194,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	188227819	188287634	chr2:188227819-188287634	1	-	188227819	188227819	8553170	2	713,168,	0,59647,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	188276731	188276844	chr2:188276731-188276844	7	-	188276731	188276731	16724991	1	113,	0,
#Partially deleted in new
chr2	188291668	188595059	chr2:188291668-188595059	1	+	188477702	188593961	789624	13	498,127,72,62,72,99,138,117,93,139,95,11,1120,	0,92094,185990,191762,231087,237428,249512,277570,278359,292596,296186,298071,302271,
#Deleted in new
chr2	188291706	188294278	chr2:188291706-188294278	0	+	188291706	188291706	8553170	2	460,79,	0,2493,
#Partially deleted in new
chr2	188291876	188594011	chr2:188291876-188594011	1	+	188477702	188594011	789624	12	290,127,72,62,72,99,138,117,93,139,95,72,	0,91886,185782,191554,230879,237220,249304,277362,278151,292388,295978,302063,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	188291945	188542122	chr2:188291945-188542122	1	+	188477702	188541423	789624	7	221,127,72,62,72,99,942,	0,91817,185713,191485,230810,237151,249235,
#Partially deleted in new
chr2	188292013	188529140	chr2:188292013-188529140	0	+	188477702	188529140	789624	6	206,127,72,62,72,44,	0,91749,185645,191417,230742,237083,
#Partially deleted in new
chr2	188292039	188594090	chr2:188292039-188594090	1	+	188477702	188594011	789624	9	127,127,72,62,117,93,139,95,151,	0,91723,185619,191391,277199,277988,292225,295815,301900,
#Partially deleted in new
chr2	188292771	188595931	chr2:188292771-188595931	3	+	188477702	188594011	789624	12	341,127,72,62,72,99,138,117,93,139,95,1992,	0,90991,184887,190659,229984,236325,248409,276467,277256,291493,295083,301168,
#Partially deleted in new
chr2	188292831	188595926	chr2:188292831-188595926	1	+	188477702	188594011	789624	13	349,194,127,72,62,72,99,138,117,93,139,95,1987,	0,1368,90931,184827,190599,229924,236265,248349,276407,277196,291433,295023,301108,
#Partially deleted in new
chr2	188292838	188541716	chr2:188292838-188541716	1	+	188477702	188541423	789624	7	274,127,72,62,72,99,536,	0,90924,184820,190592,229917,236258,248342,
#Partially deleted in new
chr2	188293817	188594281	chr2:188293817-188594281	1	+	188477702	188594011	789624	12	576,127,72,62,72,99,138,117,93,139,95,342,	0,89945,183841,189613,228938,235279,247363,275421,276210,290447,294037,300122,
#Deleted in new
chr2	188297491	188297588	chr2:188297491-188297588	3	+	188297491	188297491	5263520	1	97,	0,
#Partially deleted in new
chr2	188522737	188584309	chr2:188522737-188584309	0	+	188522737	188522737	8553170	6	90,99,138,117,93,45,	0,6359,18443,46501,47290,61527,
#Partially deleted in new
chr2	188522767	188584387	chr2:188522767-188584387	0	+	188522767	188522767	8553170	5	155,99,117,93,123,	0,6329,46471,47260,61497,
#Partially deleted in new
chr2	188529171	188588701	chr2:188529171-188588701	0	+	188529171	188529171	8553170	7	24,138,117,93,139,95,51,	0,12009,40067,40856,55093,58683,59479,
#Partially deleted in new
chr2	188569591	188594321	chr2:188569591-188594321	0	+	188569591	188569591	8553170	5	52,93,139,95,382,	0,436,14673,18263,24348,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	188570037	188595059	chr2:188570037-188595059	0	+	188570037	188588075	789624	3	83,139,7205,	0,14227,17817,
#Partially deleted in new
chr2	188570082	188594209	chr2:188570082-188594209	0	+	188570082	188594011	789624	5	38,225,139,95,270,	0,12258,14182,17772,23857,
#Partially deleted in new
chr2	188589590	188594368	chr2:188589590-188594368	0	+	188589590	188589590	8553170	2	160,429,	0,4349,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	188733737	188790104	chr2:188733737-188790104	3	-	188734605	188734920	789624	2	1212,242,	0,56125,
#Partially deleted in new
chr2	188734154	188790104	chr2:188734154-188790104	0	-	188734154	188734154	8553170	2	795,242,	0,55708,
#Partially deleted in new
chr2	188974319	189012746	chr2:188974319-189012746	3	+	188974489	189011774	0	51	249,203,51,114,81,54,54,54,54,54,54,45,54,45,54,99,45,99,54,108,54,99,54,99,54,54,54,54,45,99,108,54,54,54,54,108,54,54,162,108,108,54,108,54,108,54,108,298,188,243,1119,	0,10440,10877,11345,12739,13761,14270,15076,15776,15987,16684,17167,17349,17864,18567,19041,19718,19914,20221,20404,20726,21372,21805,22078,22845,23016,23380,23946,24354,24965,25150,25522,27077,27216,27978,28635,29091,29414,29662,29937,31030,31886,32025,32617,33180,33565,33715,34604,35858,36328,37308,
#Partially deleted in new
chr2	188974385	189012051	chr2:188974385-189012051	1	+	188974489	189011774	0	41	183,203,51,114,81,54,54,54,54,54,54,45,54,45,54,99,45,99,54,108,54,99,54,99,54,54,54,54,45,99,108,54,54,54,54,82,89,298,188,243,424,	0,10374,10811,11279,12673,13695,14204,15010,15710,15921,16618,17101,17283,17798,18501,18975,19652,19848,20155,20338,20660,21306,21739,22012,22779,22950,23314,23880,24288,24899,25084,25456,27011,27150,27912,28569,33668,34538,35792,36262,37242,
#Deleted in new
chr2	188974393	188985212	chr2:188974393-188985212	0	+	188974393	188974393	8553170	2	175,453,	0,10366,
#Deleted in new
chr2	188978091	188978161	chr2:188978091-188978161	3	+	188978091	188978091	5263520	1	70,	0,
#Deleted in new
chr2	188978092	188978161	chr2:188978092-188978161	3	-	188978092	188978092	5263520	1	69,	0,
#Deleted in new
chr2	188991673	188994308	chr2:188991673-188994308	0	+	188991673	188994308	789624	5	49,45,54,45,75,	0,510,1213,2364,2560,
#Deleted in new
chr2	188995629	188995692	chr2:188995629-188995692	3	+	188995629	188995629	5263520	1	63,	0,
#Deleted in new
chr2	189003422	189003917	chr2:189003422-189003917	0	+	189003422	189003422	8553170	2	42,184,	0,311,
#Deleted in new
chr2	189008301	189012048	chr2:189008301-189012048	0	+	189008301	189008301	8553170	3	920,713,421,	0,1876,3326,
#Partially deleted in new
chr2	189031895	189180011	chr2:189031895-189180011	3	-	189034069	189179604	0	54	2321,240,188,292,108,54,108,54,108,54,108,108,162,54,54,108,54,54,54,54,108,99,45,54,54,54,54,99,54,99,54,108,54,99,45,99,54,45,54,45,54,54,54,54,54,45,78,111,54,33,33,14,225,504,	0,3020,4720,7376,9690,10824,11255,13283,13904,16313,17451,18673,19424,20276,20853,21015,21528,21999,22263,25077,25424,26533,26953,28834,29666,30969,31114,31276,32084,32661,33108,34494,34833,36119,36330,36890,40144,43497,46620,47167,48082,49094,52088,53264,53823,54830,56799,60414,65381,66831,68211,72368,78329,147612,
#Partially deleted in new
chr2	189031914	189179879	chr2:189031914-189179879	1	-	189034069	189088709	789624	47	2302,240,188,292,108,54,108,54,108,54,108,108,162,54,54,108,54,54,54,54,108,99,45,54,54,54,54,99,54,99,54,44,28,54,54,54,54,54,45,78,111,54,33,33,14,225,372,	0,3001,4701,7357,9671,10805,11236,13264,13885,16294,17432,18654,19405,20257,20834,20996,21509,21980,22244,25058,25405,26514,26934,28815,29647,30950,31095,31257,32065,32642,33089,34475,47165,48063,49075,52069,53245,53804,54811,56780,60395,65362,66812,68192,72349,78310,147593,
#Partially deleted in new
chr2	189032513	189179761	chr2:189032513-189179761	1	-	189034069	189179604	8553170	54	1703,240,188,292,108,54,108,54,108,54,108,108,162,54,54,108,54,54,54,54,108,99,45,54,54,54,54,99,54,99,54,108,54,99,45,99,54,45,54,45,54,54,54,54,54,45,78,111,54,33,33,14,225,254,	0,2402,4102,6758,9072,10206,10637,12665,13286,15695,16833,18055,18806,19658,20235,20397,20910,21381,21645,24459,24806,25915,26335,28216,29048,30351,30496,30658,31466,32043,32490,33876,34215,35501,35712,36272,39526,42879,46002,46549,47464,48476,51470,52646,53205,54212,56181,59796,64763,66213,67593,71750,77711,146994,
#Partially deleted in new
chr2	189056765	189063038	chr2:189056765-189063038	0	-	189056765	189056765	8553170	8	261,108,99,45,54,54,54,29,	0,554,1663,2083,3964,4796,6099,6244,
#Partially deleted in new
chr2	189085169	189225312	chr2:189085169-189225312	0	-	189085169	189110408	8553170	11	44,54,45,78,111,54,33,33,14,225,165,	0,549,1556,3525,7140,12107,13557,14937,19094,25055,139978,
#Deleted in new
chr2	189095062	189096158	chr2:189095062-189096158	3	+	189095062	189095062	8553170	2	74,323,	0,773,
#Deleted in new
chr2	189133035	189133111	chr2:189133035-189133111	3	-	189133035	189133035	5263520	1	76,	0,
#Deleted in new
chr2	189311262	189311967	chr2:189311262-189311967	7	-	189311262	189311262	16724991	1	705,	0,
#Partially deleted in new
chr2	189441432	189475565	chr2:189441432-189475565	3	+	189441492	189475417	789624	21	146,130,66,91,125,71,120,89,159,60,116,176,158,181,95,96,170,60,147,92,353,	0,6946,9470,10372,13887,15878,17320,17903,21051,22261,22413,23646,24992,26035,27042,27911,28643,29386,32753,33284,33780,
#Partially deleted in new
chr2	189441445	189475546	chr2:189441445-189475546	0	+	189441492	189450922	789624	22	133,130,34,66,91,125,71,120,89,159,60,116,176,158,181,95,96,170,60,147,92,334,	0,6933,7355,9457,10359,13874,15865,17307,17890,21038,22248,22400,23633,24979,26022,27029,27898,28630,29373,32740,33271,33767,
#Partially deleted in new
chr2	189441461	189455621	chr2:189441461-189455621	0	+	189441461	189441461	8553170	5	117,130,66,91,302,	0,6917,9441,10343,13858,
#Partially deleted in new
chr2	189441467	189452049	chr2:189441467-189452049	0	+	189441467	189441467	8553170	4	111,130,66,245,	0,6911,9435,10337,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr2	189441481	189475552	chr2:189441481-189475552	0	+	189441492	189449322	789624	21	97,130,1724,91,125,71,120,89,159,60,116,176,158,181,95,96,170,60,147,92,340,	0,6897,7763,10323,13838,15829,17271,17854,21002,22212,22364,23597,24943,25986,26993,27862,28594,29337,32704,33235,33731,
#Partially deleted in new
chr2	189441492	189450922	chr2:189441492-189450922	1	+	189441492	189450922	789624	4	86,130,34,20,	0,6886,7308,9410,
#Partially deleted in new
chr2	189462483	189464211	chr2:189462483-189464211	0	+	189462483	189462483	8553170	2	159,518,	0,1210,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	189486479	189487992	chr2:189486479-189487992	7	-	189486479	189486479	16724991	2	419,820,	0,693,
#Partially deleted in new
chr2	189560578	189580887	chr2:189560578-189580887	3	-	189561877	189580460	789624	8	1613,642,246,127,116,160,68,470,	0,3005,4775,11136,12267,14582,19234,19839,
#Partially deleted in new
chr2	189565512	189583758	chr2:189565512-189583758	0	-	189565512	189580460	789624	8	87,127,116,160,68,145,87,34,	0,6202,7333,9648,14300,14905,17821,18212,
#Partially deleted in new
chr2	189572520	189580741	chr2:189572520-189580741	0	-	189572520	189572520	8553170	4	441,160,68,324,	0,2640,7292,7897,
#Partially deleted in new
chr2	189575160	189580783	chr2:189575160-189580783	0	-	189575160	189575160	8553170	4	160,118,68,366,	0,3194,4652,5257,
#Partially deleted in new
chr2	189575265	189582031	chr2:189575265-189582031	0	-	189575265	189580460	789624	4	55,68,145,324,	0,4547,5152,6442,
#Deleted in new
chr2	189579847	189582022	chr2:189579847-189582022	0	-	189579847	189580460	789624	3	33,145,121,	0,570,2054,
#Deleted in new
chr2	189579847	189583402	chr2:189579847-189583402	0	-	189579847	189580460	789624	3	33,107,69,	0,570,3486,
#Deleted in new
chr2	189625442	189626259	chr2:189625442-189626259	7	-	189625442	189625442	16724991	2	219,421,	0,396,
#Partially deleted in new
chr2	189661384	189670757	chr2:189661384-189670757	1	+	189666132	189670726	789624	6	226,54,76,113,182,317,	0,2516,3991,4656,6379,9056,
#Partially deleted in new
chr2	189661419	189670831	chr2:189661419-189670831	3	+	189666132	189670726	789624	6	191,54,76,1556,182,391,	0,2481,3956,4621,6344,9021,
#Partially deleted in new
chr2	189661438	189666351	chr2:189661438-189666351	0	+	189666132	189666351	789624	4	172,54,30,311,	0,2462,3983,4602,
#Partially deleted in new
chr2	189661451	189666305	chr2:189661451-189666305	0	+	189661520	189665386	789624	4	159,54,95,265,	0,2449,3905,4589,
#Partially deleted in new
chr2	189661458	189666437	chr2:189661458-189666437	1	+	189661520	189666058	789624	3	152,30,397,	0,3963,4582,
#Partially deleted in new
chr2	189661462	189670650	chr2:189661462-189670650	0	+	189666132	189670650	789624	5	148,76,1556,182,210,	0,3913,4578,6301,8978,
#Partially deleted in new
chr2	189661518	189667881	chr2:189661518-189667881	0	+	189661520	189667881	789624	5	92,54,76,401,118,	0,2382,3857,5677,6245,
#Partially deleted in new
chr2	189661520	189666401	chr2:189661520-189666401	1	+	189661520	189666058	789624	4	90,54,30,361,	0,2380,3901,4520,
#Partially deleted in new
chr2	189661520	189666401	chr2:189661520-189666401	1	+	189661520	189666111	789624	4	90,54,76,361,	0,2380,3855,4520,
#Partially deleted in new
chr2	189674289	189761193	chr2:189674289-189761193	0	+	189689633	189737732	789624	19	541,438,164,104,181,220,202,209,105,242,169,275,154,159,118,110,200,47,96,	0,15237,17965,18784,20691,21860,30733,32648,36759,45282,46329,53533,53977,63393,64275,67052,68985,70452,86808,
#Partially deleted in new
chr2	189674606	189696200	chr2:189674606-189696200	0	+	189674606	189674606	8553170	3	224,438,51,	0,14920,21543,
#Partially deleted in new
chr2	189676426	189746649	chr2:189676426-189746649	1	+	189676490	189746627	789624	22	665,438,164,104,181,220,202,209,105,242,169,242,154,162,107,123,159,118,110,200,47,270,	0,13100,15828,16647,18554,19723,28596,30511,34622,43145,44192,51429,51840,52233,54068,56680,61256,62138,64915,66848,68315,69953,
#Partially deleted in new
chr2	189676937	189692849	chr2:189676937-189692849	0	+	189676937	189676937	8553170	3	154,438,595,	0,12589,15317,
#Partially deleted in new
chr2	189696300	189720684	chr2:189696300-189720684	0	+	189696300	189696300	8553170	4	69,209,242,66,	0,10637,23271,24318,
#Partially deleted in new
chr2	189728352	189746650	chr2:189728352-189746650	0	+	189728352	189728352	8553170	5	68,162,110,47,271,	0,307,12989,16389,18027,
#Partially deleted in new
chr2	189738558	189753140	chr2:189738558-189753140	0	+	189738558	189738558	8553170	4	124,110,47,206,	0,2783,6183,14376,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	189746659	189762767	chr2:189746659-189762767	3	-	189750577	189761640	789624	9	509,107,72,131,149,205,388,241,83,	0,3890,5993,6189,7256,7481,8513,14760,16025,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	189746659	189763227	chr2:189746659-189763227	1	-	189750655	189761640	789624	9	672,107,131,149,205,388,241,260,63,	0,3890,6189,7256,7481,8513,14760,16025,16505,
#Partially deleted in new
chr2	189750533	189761663	chr2:189750533-189761663	0	-	189750533	189750533	8553170	6	123,72,131,430,388,244,	0,2119,2315,3382,4639,10886,
#Partially deleted in new
chr2	189750577	189763198	chr2:189750577-189763198	1	-	189750577	189761640	789624	8	79,72,131,149,205,388,241,514,	0,2075,2271,3338,3563,4595,10842,12107,
#Partially deleted in new
chr2	189753915	189762767	chr2:189753915-189762767	0	-	189753915	189755340	789624	6	149,205,388,106,14,83,	0,225,1257,7504,7731,8769,
#Partially deleted in new
chr2	189754286	189762792	chr2:189754286-189762792	0	-	189754286	189761640	789624	4	59,388,241,226,	0,886,7133,8280,
#Partially deleted in new
chr2	189754314	189762793	chr2:189754314-189762793	0	-	189754314	189754314	8553170	3	1246,241,109,	0,7105,8370,
#Partially deleted in new
chr2	189755172	189762776	chr2:189755172-189762776	0	-	189755172	189761640	789624	3	388,241,245,	0,6247,7359,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	189762820	189765226	chr2:189762820-189765226	0	+	189762820	189762820	789624	2	172,372,	0,2034,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	189762838	189765327	chr2:189762838-189765327	1	+	189762838	189762838	8553170	2	94,473,	0,2016,
#Deleted in new
chr2	189763858	189764456	chr2:189763858-189764456	3	-	189763858	189763858	8553170	1	598,	0,
#Partially deleted in new
chr2	189770322	189784364	chr2:189770322-189784364	3	-	189771766	189782595	789624	4	1580,152,181,96,	0,5242,12099,13946,
#Partially deleted in new
chr2	189770323	189783382	chr2:189770323-189783382	1	-	189771766	189782595	789624	3	1579,152,961,	0,5241,12098,
#Partially deleted in new
chr2	189771310	189774017	chr2:189771310-189774017	0	-	189771310	189771310	8553170	2	592,131,	0,2576,
#Partially deleted in new
chr2	189771311	189784371	chr2:189771311-189784371	1	-	189771766	189782595	789624	5	591,152,181,110,103,	0,4253,11110,11702,12957,
#Partially deleted in new
chr2	189774724	189784318	chr2:189774724-189784318	1	-	189775560	189782595	789624	3	992,181,50,	0,7697,9544,
#Partially deleted in new
chr2	189775564	189783573	chr2:189775564-189783573	0	-	189775564	189782595	789624	3	152,181,560,	0,6857,7449,
#Partially deleted in new
chr2	189775564	189784328	chr2:189775564-189784328	0	-	189775564	189782595	789624	3	152,702,60,	0,6857,8704,
#Partially deleted in new
chr2	189784084	189877628	chr2:189784084-189877628	3	+	189791809	189873528	789624	11	509,152,183,103,164,123,144,890,232,161,357,	0,7705,11684,21567,33932,68570,69854,70154,79658,89411,93187,
#Partially deleted in new
chr2	189784084	189877628	chr2:189784084-189877628	1	+	189818126	189877436	789624	11	509,152,164,117,123,144,890,486,131,161,357,	0,7705,33932,59879,68570,69854,70154,79658,83714,89411,93187,
#Partially deleted in new
chr2	189784084	189877628	chr2:189784084-189877628	1	+	189791809	189877436	789624	6	509,152,183,103,164,357,	0,7705,11684,21567,33932,93187,
#Partially deleted in new
chr2	189784084	189877628	chr2:189784084-189877628	1	+	189818126	189877436	789624	12	509,152,183,164,117,123,144,890,486,131,161,357,	0,7705,11684,33932,59879,68570,69854,70154,79658,83714,89411,93187,
#Partially deleted in new
chr2	189784084	189864359	chr2:189784084-189864359	1	+	189791809	189864359	789624	10	509,152,183,103,164,123,144,890,232,6,	0,7705,11684,21567,33932,68570,69854,70154,79658,80269,
#Partially deleted in new
chr2	189784380	189877629	chr2:189784380-189877629	1	+	189791809	189877436	0	13	213,152,183,103,164,117,123,144,890,486,131,161,358,	0,7409,11388,21271,33636,59583,68274,69558,69858,79362,83418,89115,92891,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	189784449	189807054	chr2:189784449-189807054	1	+	189791809	189805882	789624	4	144,152,183,1403,	0,7340,11319,21202,
#Partially deleted in new
chr2	189784488	189877627	chr2:189784488-189877627	0	+	189791809	189818028	789624	12	105,152,183,164,117,123,144,890,486,131,161,356,	0,7301,11280,33528,59475,68166,69450,69750,79254,83310,89007,92783,
#Partially deleted in new
chr2	189784488	189791941	chr2:189784488-189791941	0	+	189791809	189791941	789624	3	282,126,152,	0,857,7301,
#Partially deleted in new
chr2	189784500	189877436	chr2:189784500-189877436	1	+	189791809	189877436	0	12	93,152,183,103,164,123,144,890,486,131,161,165,	0,7289,11268,21151,33516,68154,69438,69738,79242,83298,88995,92771,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	189784507	189806846	chr2:189784507-189806846	1	+	189791809	189806502	789624	5	86,152,183,103,424,	0,7282,11261,21144,21915,
#Partially deleted in new
chr2	189784512	189877627	chr2:189784512-189877627	0	+	189791809	189867807	789624	13	52,126,152,183,103,164,123,144,890,232,131,161,356,	0,833,7277,11256,21139,33504,68142,69426,69726,79230,83286,88983,92759,
#Partially deleted in new
chr2	189784527	189864114	chr2:189784527-189864114	0	+	189784527	189784527	8553170	10	66,152,183,103,164,123,144,890,88,372,	0,7262,11241,21124,33489,68127,69411,69711,71301,79215,
#Partially deleted in new
chr2	189784542	189818181	chr2:189784542-189818181	0	+	189791809	189818181	789624	5	228,152,183,103,165,	0,7247,11226,21109,33474,
#Partially deleted in new
chr2	189784543	189877629	chr2:189784543-189877629	1	+	189791809	189877436	0	12	50,152,183,103,164,117,123,144,890,131,161,358,	0,7246,11225,21108,33473,59420,68111,69395,69695,83255,88952,92728,
#Partially deleted in new
chr2	189784564	189852762	chr2:189784564-189852762	0	+	189791809	189818028	789624	5	29,152,164,117,108,	0,7225,33452,59399,68090,
#Partially deleted in new
chr2	189791699	189795857	chr2:189791699-189795857	0	+	189791809	189795857	789624	2	242,89,	0,4069,
#Partially deleted in new
chr2	189791789	189864202	chr2:189791789-189864202	0	+	189791809	189864202	789624	8	152,103,164,117,123,144,890,460,	0,13862,26227,52174,60865,62149,62449,71953,
#Partially deleted in new
chr2	189791809	189873528	chr2:189791809-189873528	0	+	189791809	189791809	8553170	9	132,183,103,164,123,144,890,232,33,	0,3959,13842,26207,60845,62129,62429,71933,81686,
#Partially deleted in new
chr2	189818126	189877436	chr2:189818126-189877436	0	+	189818126	189877436	0	7	54,123,144,890,131,161,165,	0,34528,35812,36112,49672,55369,59145,
#Partially deleted in new
chr2	189857359	189867929	chr2:189857359-189867929	0	+	189857359	189857359	8553170	3	46,486,131,	0,6383,10439,
#Partially deleted in new
chr2	189857401	189873656	chr2:189857401-189873656	0	+	189857484	189873656	789624	4	103,486,131,161,	0,6341,10397,16094,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	189879608	190079570	chr2:189879608-190079570	0	+	189879608	189879608	8553170	2	219,348,	0,199614,
#Partially deleted in new
chr2	189879626	190164051	chr2:189879626-190164051	0	+	189879626	189879626	8553170	3	201,70,116,	0,200327,284309,
#Deleted in new
chr2	189917253	189917758	chr2:189917253-189917758	7	-	189917253	189917253	16724991	1	505,	0,
#Deleted in new
chr2	189923335	189924216	chr2:189923335-189924216	7	+	189923335	189923335	16724991	1	881,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	189930276	189931010	chr2:189930276-189931010	7	-	189930276	189930276	16724991	2	119,321,	0,413,
#Partially deleted in new
chr2	190055696	190062729	chr2:190055696-190062729	3	-	190057257	190062596	0	3	1942,374,506,	0,4365,6527,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	190089540	190199827	chr2:190089540-190199827	0	+	190089540	190089540	8553170	5	68,74,84,125,131,	0,1356,5978,74395,110156,
#Partially deleted in new
chr2	190089575	190199950	chr2:190089575-190199950	0	+	190199860	190199950	789624	4	33,74,125,254,	0,1321,74360,110121,
#Partially deleted in new
chr2	190137759	190200479	chr2:190137759-190200479	3	+	190199860	190200148	0	3	90,125,783,	0,26176,61937,
#Partially deleted in new
chr2	190180481	190200209	chr2:190180481-190200209	1	+	190199860	190200148	0	2	928,513,	0,19215,
#Partially deleted in new
chr2	190180862	190203484	chr2:190180862-190203484	1	+	190199860	190200148	0	2	247,3788,	0,18834,
#Partially deleted in new
chr2	190180954	190200214	chr2:190180954-190200214	1	+	190199860	190200148	0	2	174,518,	0,18742,
#Partially deleted in new
chr2	190189734	190205232	chr2:190189734-190205232	0	-	190205116	190205232	789624	2	263,133,	0,15365,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	190203920	190319890	chr2:190203920-190319890	1	-	190205226	190319750	0	13	1312,120,82,59,87,146,79,53,81,85,141,43,175,	0,9035,40966,42233,45719,48241,57235,83665,86484,90625,92892,106833,115795,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	190204633	190320045	chr2:190204633-190320045	3	-	190205116	190319750	0	14	599,34,120,82,59,87,146,79,53,81,85,141,43,330,	0,4246,8322,40253,41520,45006,47528,56522,82952,85771,89912,92179,106120,115082,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	190204634	190220450	chr2:190204634-190220450	0	-	190204634	190204634	8553170	4	168,133,120,160,	0,465,8321,15656,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	190205014	190250513	chr2:190205014-190250513	1	-	190205116	190249720	789624	7	218,34,120,82,59,87,254,	0,3865,7941,39872,41139,44625,45245,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	190208675	190246215	chr2:190208675-190246215	0	-	190208817	190246215	789624	4	238,120,82,62,	0,4280,36211,37478,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	190208684	190216109	chr2:190208684-190216109	0	-	190208684	190208684	8553170	2	229,3154,	0,4271,
#Partially deleted in new
chr2	190208879	190250503	chr2:190208879-190250503	0	-	190208879	190250377	789624	6	34,120,82,59,87,129,	0,4076,36007,37274,40760,41495,
#Partially deleted in new
chr2	190244901	190290485	chr2:190244901-190290485	0	-	190252232	190290485	789624	6	67,59,87,146,53,81,	0,1252,4738,7260,42684,45503,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	190245301	190281068	chr2:190245301-190281068	0	-	190245301	190245301	8553170	5	69,59,87,146,138,	0,852,4338,6860,35629,
#Deleted in new
chr2	190251491	190252296	chr2:190251491-190252296	0	-	190251534	190252296	789624	2	67,135,	0,670,
#Partially deleted in new
chr2	190252165	190344193	chr2:190252165-190344193	0	-	190252165	190344188	789624	8	142,79,53,81,85,141,43,202,	0,8990,35420,38239,42380,44647,58588,91826,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	190252238	190281097	chr2:190252238-190281097	0	-	190252238	190252238	8553170	4	69,112,79,167,	0,8161,8917,28692,
#Partially deleted in new
chr2	190343469	190371664	chr2:190343469-190371664	3	+	190360102	190371402	789624	7	492,144,268,61,201,175,821,	0,5418,16569,19157,23225,25633,27374,
#Partially deleted in new
chr2	190343569	190371665	chr2:190343569-190371665	1	+	190360102	190371402	789624	6	392,268,61,201,175,822,	0,16469,19057,23125,25533,27274,
#Partially deleted in new
chr2	190343646	190360131	chr2:190343646-190360131	0	+	190360102	190360131	789624	3	315,144,93,	0,5241,16392,
#Partially deleted in new
chr2	190343874	190362687	chr2:190343874-190362687	0	+	190360102	190362687	789624	5	87,144,53,268,61,	0,5013,15771,16164,18752,
#Partially deleted in new
chr2	190343907	190369277	chr2:190343907-190369277	0	+	190360102	190369277	789624	6	54,53,268,61,201,175,	0,15738,16131,18719,22787,25195,
#Partially deleted in new
chr2	190343917	190369208	chr2:190343917-190369208	0	+	190360102	190369208	789624	5	161,268,61,201,106,	0,16121,18709,22777,25185,
#Partially deleted in new
chr2	190343929	190366730	chr2:190343929-190366730	0	+	190343929	190343929	8553170	4	32,144,268,36,	0,4958,16109,22765,
#Partially deleted in new
chr2	190343929	190365152	chr2:190343929-190365152	0	+	190343929	190343929	8553170	5	32,53,268,61,40,	0,15716,16109,18697,21183,
#Partially deleted in new
chr2	190343941	190366858	chr2:190343941-190366858	0	+	190360102	190366858	789624	4	133,268,61,164,	0,16097,18685,22753,
#Partially deleted in new
chr2	190344078	190369272	chr2:190344078-190369272	0	+	190360102	190369272	789624	5	140,268,61,201,170,	0,15960,18548,22616,25024,
#Partially deleted in new
chr2	190344163	190360193	chr2:190344163-190360193	0	+	190360102	190360193	789624	4	55,71,144,155,	0,1341,4724,15875,
#Partially deleted in new
chr2	190356516	190366895	chr2:190356516-190366895	0	+	190360102	190366895	789624	4	101,268,61,201,	0,3522,6110,10178,
#Partially deleted in new
chr2	190356535	190360306	chr2:190356535-190360306	0	+	190360102	190360306	789624	2	273,268,	0,3503,
#Partially deleted in new
chr2	190360017	190363007	chr2:190360017-190363007	0	+	190360017	190360017	8553170	2	289,381,	0,2609,
#Deleted in new
chr2	190368643	190371041	chr2:190368643-190371041	0	+	190368643	190368643	8553170	2	634,198,	0,2200,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	190408354	190502315	chr2:190408354-190502315	3	+	190436029	190500218	789624	8	149,122,1585,98,162,99,281,2301,	0,6937,27622,61403,80302,81413,89084,91660,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	190408354	190436156	chr2:190408354-190436156	0	+	190436029	190436156	789624	4	149,122,66,180,	0,6937,24972,27622,
#Partially deleted in new
chr2	190408354	190436373	chr2:190408354-190436373	0	+	190436029	190436373	789624	2	149,397,	0,27622,
#Deleted in new
chr2	190435300	190436498	chr2:190435300-190436498	0	+	190436029	190436498	789624	2	29,522,	0,676,
#Partially deleted in new
chr2	190435894	190502315	chr2:190435894-190502315	1	+	190436029	190500218	789624	6	1667,98,162,99,281,2301,	0,33863,52762,53873,61544,64120,
#Partially deleted in new
chr2	190437423	190502113	chr2:190437423-190502113	0	+	190437423	190500025	789624	7	138,98,162,99,281,25,2099,	0,32334,51233,52344,60015,62408,62591,
#Partially deleted in new
chr2	190442575	190469855	chr2:190442575-190469855	0	+	190442575	190442575	8553170	2	430,98,	0,27182,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	190454091	190454521	chr2:190454091-190454521	3	-	190454091	190454091	8553170	1	430,	0,
#Partially deleted in new
chr2	190469492	190497699	chr2:190469492-190497699	0	+	190469839	190497699	789624	5	157,98,162,99,261,	0,265,19164,20275,27946,
#Partially deleted in new
chr2	190489819	190497995	chr2:190489819-190497995	0	+	190489819	190489819	8553170	2	47,557,	0,7619,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	190497648	190509205	chr2:190497648-190509205	0	+	190497648	190500218	789624	4	71,262,126,43,	0,2366,7347,11514,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	190504341	190534722	chr2:190504341-190534722	3	-	190509188	190534655	789624	9	4971,177,226,115,94,73,232,116,164,	0,6019,10111,11928,13178,14394,14610,20921,30217,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	190510497	190534349	chr2:190510497-190534349	0	-	190514666	190525268	789624	7	40,226,94,73,232,116,338,	0,3955,7022,8238,8454,14765,23514,
#Partially deleted in new
chr2	190514451	190525325	chr2:190514451-190525325	0	-	190518977	190525325	789624	6	227,115,94,73,71,63,	0,1818,3068,4284,4500,10811,
#Partially deleted in new
chr2	190516263	190534678	chr2:190516263-190534678	0	-	190518977	190534655	789624	6	75,94,73,71,116,120,	0,1256,2472,2688,8999,18295,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	190518735	190534328	chr2:190518735-190534328	0	-	190518735	190518735	8553170	3	73,232,317,	0,216,15276,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	190519116	190534357	chr2:190519116-190534357	0	-	190519116	190525268	789624	3	67,116,249,	0,6146,14992,
#Partially deleted in new
chr2	190534854	190568102	chr2:190534854-190568102	3	+	190534854	190534854	8553170	3	267,107,30,	0,1026,33218,
#Deleted in new
chr2	190553263	190553480	chr2:190553263-190553480	3	-	190553263	190553263	8553170	1	217,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	190607659	190648474	chr2:190607659-190648474	1	-	190607659	190607659	8553170	6	3337,95,335,647,75,255,	0,12654,18829,20409,22091,40560,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	190616842	190648329	chr2:190616842-190648329	0	-	190616842	190616842	8553170	5	276,95,335,647,110,	0,3471,9646,11226,31377,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	190624527	190648473	chr2:190624527-190648473	2	-	190624527	190624527	8553170	3	2296,647,254,	0,3541,23692,
#Partially deleted in new
chr2	190626479	190648336	chr2:190626479-190648336	0	-	190626479	190626479	8553170	4	344,838,512,117,	0,1398,14471,21740,
#Partially deleted in new
chr2	190628194	190649840	chr2:190628194-190649840	0	-	190628194	190628194	8553170	2	521,53,	0,21593,
#Partially deleted in new
chr2	190640984	190649442	chr2:190640984-190649442	0	-	190640984	190640984	8553170	2	478,74,	0,8384,
#Partially deleted in new
chr2	190646745	190659634	chr2:190646745-190659634	0	+	190659176	190659634	789624	2	113,477,	0,12412,
#Partially deleted in new
chr2	190648894	190659648	chr2:190648894-190659648	0	+	190659176	190659648	789624	2	77,491,	0,10263,
#Partially deleted in new
chr2	190648897	190659476	chr2:190648897-190659476	0	+	190659176	190659476	789624	3	74,152,319,	0,933,10260,
#Partially deleted in new
chr2	190649069	190690919	chr2:190649069-190690919	1	+	190659176	190690333	0	8	291,838,134,52,90,163,117,675,	0,10088,21256,24031,34668,36406,38131,41175,
#Partially deleted in new
chr2	190649232	190692766	chr2:190649232-190692766	3	+	190659176	190690333	0	10	128,137,177,838,134,52,90,163,117,2522,	0,613,6744,9925,21093,23868,34505,36243,37968,41012,
#Deleted in new
chr2	190653724	190659362	chr2:190653724-190659362	0	+	190659176	190659362	789624	3	56,177,205,	0,2252,5433,
#Deleted in new
chr2	190653730	190659585	chr2:190653730-190659585	0	+	190659332	190659585	789624	3	50,183,309,	0,2246,5546,
#Partially deleted in new
chr2	190659058	190691226	chr2:190659058-190691226	1	+	190659176	190690333	789624	7	937,134,52,90,160,117,982,	0,11267,14042,24679,26420,28142,31186,
#Partially deleted in new
chr2	190659829	190691273	chr2:190659829-190691273	0	+	190659829	190690333	789624	6	166,134,52,163,117,1029,	0,10496,13271,25646,27371,30415,
#Partially deleted in new
chr2	190659856	190683827	chr2:190659856-190683827	0	+	190659856	190659856	8553170	2	139,90,	0,23881,
#Partially deleted in new
chr2	190676943	190690372	chr2:190676943-190690372	3	-	190676943	190676943	8553170	3	575,210,23,	0,8529,13406,
#Partially deleted in new
chr2	190677296	190701546	chr2:190677296-190701546	0	-	190677296	190677296	8553170	3	222,150,84,	0,22418,24166,
#Deleted in new
chr2	190880796	190882059	chr2:190880796-190882059	3	-	190880796	190880796	8553170	2	772,147,	0,1116,
#Partially deleted in new
chr2	190880826	190965552	chr2:190880826-190965552	3	+	190881084	190962986	0	18	644,97,122,130,80,164,59,33,59,67,51,177,132,93,62,77,64,2723,	0,14325,14777,19737,21120,24177,29436,40197,40318,43090,43716,46479,49610,50718,72738,73757,73928,82003,
#Partially deleted in new
chr2	190880833	190935289	chr2:190880833-190935289	1	+	190881084	190932862	0	15	637,97,122,130,80,164,59,33,59,67,51,177,132,93,2574,	0,14318,14770,19730,21113,24170,29429,40190,40311,43083,43709,46472,49603,50711,51882,
#Partially deleted in new
chr2	190880871	190896568	chr2:190880871-190896568	0	+	190880871	190880871	8553170	2	599,1417,	0,14280,
#Partially deleted in new
chr2	190881154	190895863	chr2:190881154-190895863	0	+	190881154	190881154	8553170	3	316,97,260,	0,13997,14449,
#Partially deleted in new
chr2	190895651	190905276	chr2:190895651-190905276	0	+	190895651	190895651	8553170	4	74,130,80,273,	0,4912,6295,9352,
#Partially deleted in new
chr2	190900663	190927393	chr2:190900663-190927393	0	+	190900663	190913204	789624	11	30,80,164,59,172,34,33,59,67,51,88,	0,1283,4340,9599,12529,19551,20360,20481,23253,23879,26642,
#Partially deleted in new
chr2	190910262	190927611	chr2:190910262-190927611	0	+	190910262	190910262	8553170	6	59,33,59,67,51,306,	0,10761,10882,13654,14280,17043,
#Partially deleted in new
chr2	190920044	190924592	chr2:190920044-190924592	0	+	190920044	190920044	8553170	5	204,33,59,67,50,	0,979,1100,3872,4498,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	190921026	190924780	chr2:190921026-190924780	0	+	190921026	190921026	8553170	4	30,59,67,238,	0,118,2890,3516,
#Partially deleted in new
chr2	190927003	190933008	chr2:190927003-190933008	1	+	190927344	190932862	789624	4	479,132,93,293,	0,3433,4541,5712,
#Partially deleted in new
chr2	190927015	190954650	chr2:190927015-190954650	0	+	190927344	190954650	789624	5	467,132,93,62,67,	0,3421,4529,26549,27568,
#Partially deleted in new
chr2	190927671	190963158	chr2:190927671-190963158	1	+	190930496	190962986	789624	7	59,132,93,62,77,64,329,	0,2765,3873,25893,26912,27083,35158,
#Partially deleted in new
chr2	190927692	190933084	chr2:190927692-190933084	1	+	190930496	190932862	789624	4	38,132,93,369,	0,2744,3852,5023,
#Partially deleted in new
chr2	190930448	190963170	chr2:190930448-190963170	0	+	190930448	190963026	789624	5	120,93,62,77,341,	0,1096,23116,24135,32381,
#Deleted in new
chr2	190931562	190933105	chr2:190931562-190933105	0	+	190931562	190931562	8553170	2	75,449,	0,1094,
#Partially deleted in new
chr2	190964357	190974935	chr2:190964357-190974935	0	-	190970702	190974935	789624	3	337,220,106,	0,6140,10472,
#Partially deleted in new
chr2	190969033	191014250	chr2:190969033-191014250	3	-	190970702	191010003	0	25	1684,103,76,186,146,95,50,136,99,84,42,94,30,60,93,159,152,92,79,90,99,145,129,154,233,	0,5796,6778,7806,9822,10738,11586,13349,14608,15276,16585,17820,18005,20581,22194,26027,28822,29183,30592,32040,38529,39929,40842,44491,44984,
#Partially deleted in new
chr2	190969035	191014250	chr2:190969035-191014250	1	-	190997966	191010003	789624	24	1682,103,76,186,146,95,50,136,99,84,42,94,30,60,93,159,152,79,90,99,145,129,154,233,	0,5794,6776,7804,9820,10736,11584,13347,14606,15274,16583,17818,18003,20579,22192,26025,28820,30590,32038,38527,39927,40840,44489,44982,
#Partially deleted in new
chr2	190970290	191013955	chr2:190970290-191013955	1	-	190970702	191010003	0	24	427,103,76,186,146,95,50,136,99,84,42,94,30,60,93,159,152,92,79,90,99,145,129,431,	0,4539,5521,6549,8565,9481,10329,12092,13351,14019,15328,16563,16748,19324,20937,24770,27565,27926,29335,30783,37272,38672,39585,43234,
#Partially deleted in new
chr2	190970581	190976922	chr2:190970581-190976922	0	-	190975372	190976922	789624	5	136,103,79,76,83,	0,4248,4728,5230,6258,
#Partially deleted in new
chr2	190975536	191014168	chr2:190975536-191014168	1	-	190975807	191010003	0	23	351,186,146,95,50,136,99,84,42,94,30,60,93,159,152,92,79,90,99,145,129,154,151,	0,1303,3319,4235,5083,6846,8105,8773,10082,11317,11502,14078,15691,19524,22319,22680,24089,25537,32026,33426,34339,37988,38481,
#Partially deleted in new
chr2	190975626	191014228	chr2:190975626-191014228	0	-	190997966	191010003	789624	22	261,186,146,95,50,136,99,84,42,94,30,60,93,159,152,79,90,99,145,129,154,211,	0,1213,3229,4145,4993,6756,8015,8683,9992,11227,11412,13988,15601,19434,22229,23999,25447,31936,33336,34249,37898,38391,
#Partially deleted in new
chr2	190975641	191014197	chr2:190975641-191014197	1	-	190975807	191010371	789624	24	246,186,146,95,50,136,99,84,42,94,30,60,93,159,152,92,79,90,99,145,129,83,154,180,	0,1198,3214,4130,4978,6741,8000,8668,9977,11212,11397,13973,15586,19419,22214,22575,23984,25432,31921,33321,34234,34725,37883,38376,
#Partially deleted in new
chr2	190978490	190983714	chr2:190978490-190983714	0	-	190978490	190978490	8553170	5	511,95,50,136,73,	0,1281,2129,3892,5151,
#Partially deleted in new
chr2	190992638	190993567	chr2:190992638-190993567	7	-	190992638	190992638	16724991	2	141,477,	0,452,
#Partially deleted in new
chr2	190999625	191014211	chr2:190999625-191014211	0	-	190999625	191010003	789624	6	79,90,99,145,129,194,	0,1448,7937,9337,10250,14392,
#Partially deleted in new
chr2	191001085	191020320	chr2:191001085-191020320	0	-	191001085	191010003	789624	5	78,99,145,129,121,	0,6477,7877,8790,19114,
#Partially deleted in new
chr2	191009026	191020960	chr2:191009026-191020960	0	-	191009026	191010003	789624	4	81,129,154,203,	0,849,4498,11731,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	191017953	191019079	chr2:191017953-191019079	3	+	191017953	191017953	8553170	2	213,410,	0,716,
#Partially deleted in new
chr2	191021525	191032314	chr2:191021525-191032314	3	+	191021525	191021525	789624	3	30,213,143,	0,9359,10646,
#Partially deleted in new
chr2	191029575	191151590	chr2:191029575-191151590	3	-	191029839	191148203	789624	24	291,109,67,192,137,95,50,136,99,84,45,94,18,60,93,159,152,86,79,93,99,145,129,257,	0,1396,1874,3382,3914,4335,4972,6588,9623,11489,24914,28442,28626,29134,32153,33186,35231,36854,40117,43522,46651,117037,118500,121758,
#Partially deleted in new
chr2	191029579	191151260	chr2:191029579-191151260	1	-	191029839	191148203	789624	24	287,109,67,192,137,95,50,136,99,84,45,94,18,60,93,159,152,86,79,93,99,145,129,314,	0,1392,1870,3378,3910,4331,4968,6584,9619,11485,24910,28438,28622,29130,32149,33182,35227,36850,40113,43518,46647,117033,118496,121367,
#Partially deleted in new
chr2	191030750	191032314	chr2:191030750-191032314	0	+	191030750	191030750	8553170	2	347,143,	0,1421,
#Partially deleted in new
chr2	191031207	191033607	chr2:191031207-191033607	0	-	191031207	191031207	8553170	3	309,192,118,	0,1750,2282,
#Partially deleted in new
chr2	191032861	191151013	chr2:191032861-191151013	0	-	191032861	191032861	8553170	21	288,137,95,50,136,99,84,45,94,18,60,93,159,152,86,79,93,99,145,129,67,	0,628,1049,1686,3302,6337,8203,21628,25156,25340,25848,28867,29900,31945,33568,36831,40236,43365,113751,115214,118085,
#Partially deleted in new
chr2	191036177	191041683	chr2:191036177-191041683	0	-	191036177	191036177	8553170	4	122,99,84,210,	0,3021,4887,5296,
#Partially deleted in new
chr2	191066429	191151555	chr2:191066429-191151555	0	-	191068562	191148203	789624	8	86,535,79,93,99,145,129,222,	0,1630,3263,6668,9797,80183,81646,84904,
#Partially deleted in new
chr2	191076023	191151015	chr2:191076023-191151015	0	-	191076023	191076023	8553170	4	302,145,129,69,	0,70589,72052,74923,
#Partially deleted in new
chr2	191076226	191151560	chr2:191076226-191151560	0	-	191076226	191148122	789624	4	99,145,77,227,	0,70386,71849,75107,
#Partially deleted in new
chr2	191131490	191150971	chr2:191131490-191150971	1	-	191131819	191148203	789624	4	410,145,129,25,	0,15122,16585,19456,
#Partially deleted in new
chr2	191146648	191151596	chr2:191146648-191151596	0	-	191146648	191148203	789624	4	109,129,68,263,	0,1427,4298,4685,
#Deleted in new
chr2	191148127	191151595	chr2:191148127-191151595	0	-	191148127	191148203	789624	3	77,135,262,	0,2819,3206,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	191154117	191156070	chr2:191154117-191156070	3	-	191154117	191154117	8553170	1	1953,	0,
#Deleted in new
chr2	191174232	191174835	chr2:191174232-191174835	7	+	191174232	191174232	16724991	1	603,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	191229164	191246172	chr2:191229164-191246172	3	-	191229164	191229164	8553170	4	90,111,454,254,	0,2702,14455,16754,
#Partially deleted in new
chr2	191245184	191346274	chr2:191245184-191346274	0	+	191276895	191346274	789624	6	73,144,116,95,105,39,	0,31702,50926,84750,96276,101051,
#Partially deleted in new
chr2	191245275	191425389	chr2:191245275-191425389	3	+	191276895	191423960	789624	29	351,144,116,95,105,47,64,99,104,148,119,87,66,105,63,201,227,201,94,150,69,87,75,135,107,133,153,128,1553,	0,31611,50835,84659,96185,100960,104886,115355,116992,118452,118882,124266,124951,136186,138004,140608,141948,145016,146832,147797,151153,155106,162839,163768,165790,168772,169241,170839,178561,
#Partially deleted in new
chr2	191245388	191425384	chr2:191245388-191425384	1	+	191276895	191423960	789624	31	238,144,116,95,105,47,64,99,104,148,119,87,66,105,63,201,227,201,94,150,69,87,87,87,75,135,107,133,153,128,1548,	0,31498,50722,84546,96072,100847,104773,115242,116879,118339,118769,124153,124838,136073,137891,140495,141835,144903,146719,147684,151040,154993,155360,157243,162726,163655,165677,168659,169128,170726,178448,
#Partially deleted in new
chr2	191245527	191425389	chr2:191245527-191425389	1	+	191276895	191423960	789624	31	84,144,116,95,105,47,64,99,104,148,119,87,66,105,63,201,227,201,94,150,69,87,87,87,75,135,107,133,153,128,1553,	0,31359,50583,84407,95933,100708,104634,115103,116740,118200,118630,124014,124699,135934,137752,140356,141696,144764,146580,147545,150901,154854,155221,157104,162587,163516,165538,168520,168989,170587,178309,
#Partially deleted in new
chr2	191246282	191341562	chr2:191246282-191341562	0	+	191276895	191341562	789624	5	85,144,116,95,102,	0,30604,49828,83652,95178,
#Partially deleted in new
chr2	191262998	191363873	chr2:191262998-191363873	0	+	191276895	191363873	789624	10	390,144,116,95,105,47,64,99,104,146,	0,13888,33112,66936,78462,83237,87163,97632,99269,100729,
#Partially deleted in new
chr2	191263353	191350389	chr2:191263353-191350389	0	+	191263353	191263353	8553170	7	35,144,116,95,105,47,228,	0,13533,32757,66581,78107,82882,86808,
#Partially deleted in new
chr2	191263572	191296226	chr2:191263572-191296226	0	+	191276895	191296226	789624	3	114,144,116,	0,13314,32538,
#Partially deleted in new
chr2	191276884	191425389	chr2:191276884-191425389	1	+	191276895	191423960	789624	29	146,116,95,105,47,64,99,104,148,119,87,66,105,63,201,227,201,94,150,69,87,87,75,135,107,133,153,128,1553,	0,19226,53050,64576,69351,73277,83746,85383,86843,87273,92657,93342,104577,106395,108999,110339,113407,115223,116188,119544,123497,125747,131230,132159,134181,137163,137632,139230,146952,
#Partially deleted in new
chr2	191369563	191387284	chr2:191369563-191387284	0	+	191369563	191387284	789624	7	65,66,6,105,63,201,61,	0,663,9703,11898,13716,16320,17660,
#Deleted in new
chr2	191370937	191371044	chr2:191370937-191371044	3	+	191370937	191370937	8553170	1	107,	0,
#Partially deleted in new
chr2	191377521	191383339	chr2:191377521-191383339	0	+	191377521	191377521	8553170	3	396,105,60,	0,3940,5758,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	191381003	191388276	chr2:191381003-191388276	0	+	191381003	191381003	8553170	4	563,63,201,1053,	0,2276,4880,6220,
#Partially deleted in new
chr2	191401539	191424037	chr2:191401539-191424037	0	+	191401539	191401539	8553170	8	1179,75,135,107,133,153,128,201,	0,6575,7504,9526,12508,12977,14575,22297,
#Deleted in new
chr2	191407657	191409073	chr2:191407657-191409073	0	+	191407657	191407657	8553170	2	532,30,	0,1386,
#Partially deleted in new
chr2	191411064	191416511	chr2:191411064-191416511	0	+	191411064	191416297	789624	4	108,133,153,397,	0,2983,3452,5050,
#Partially deleted in new
chr2	191678067	191682487	chr2:191678067-191682487	0	+	191678067	191678067	8553170	3	174,139,542,	0,922,3878,
#Partially deleted in new
chr2	191678126	191686939	chr2:191678126-191686939	0	+	191681955	191682594	789624	7	115,139,72,104,76,67,1341,	0,863,3819,4365,5602,6103,7472,
#Partially deleted in new
chr2	191678135	191687572	chr2:191678135-191687572	0	+	191678614	191682594	789624	7	570,139,72,104,76,67,1974,	0,854,3810,4356,5593,6094,7463,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	191678135	191696659	chr2:191678135-191696659	1	+	191681955	191685768	789624	6	106,139,72,76,67,11061,	0,854,3810,5593,6094,7463,
#Partially deleted in new
chr2	191678135	191683135	chr2:191678135-191683135	0	+	191678135	191678135	8553170	4	106,139,72,644,	0,854,3810,4356,
#Partially deleted in new
chr2	191678146	191686157	chr2:191678146-191686157	0	+	191678614	191682594	789624	7	559,139,72,104,515,67,559,	0,843,3799,4345,5143,6083,7452,
#Partially deleted in new
chr2	191678203	191685894	chr2:191678203-191685894	1	+	191681955	191685768	789624	6	193,139,72,76,67,296,	0,786,3742,5525,6026,7395,
#Partially deleted in new
chr2	191678531	191686948	chr2:191678531-191686948	3	+	191678614	191685768	789624	6	174,139,72,76,67,1350,	0,458,3414,5197,5698,7067,
#Partially deleted in new
chr2	191678989	191686177	chr2:191678989-191686177	0	+	191678989	191685768	789624	5	139,72,76,49,579,	0,2956,4739,5240,6609,
#Deleted in new
chr2	191682451	191682633	chr2:191682451-191682633	3	+	191682451	191682451	8553170	1	182,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	191793424	191820250	chr2:191793424-191820250	3	+	191793424	191793424	8553170	4	35,121,97,290,	0,18096,20918,26536,
#Partially deleted in new
chr2	191834301	191847255	chr2:191834301-191847255	3	-	191835922	191846925	789624	2	2416,813,	0,12141,
#Partially deleted in new
chr2	191846538	192036759	chr2:191846538-192036759	0	+	191846538	191846538	8553170	3	233,192,75,	0,188155,190146,
#Deleted in new
chr2	191881181	191882205	chr2:191881181-191882205	7	-	191881181	191881181	16724991	1	1024,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	191922545	192036829	chr2:191922545-192036829	3	+	191922545	191922545	8553170	5	499,99,272,192,145,	0,108036,108786,112148,114139,
#Partially deleted in new
chr2	191949042	192194916	chr2:191949042-192194916	1	-	191950451	192194524	0	10	1422,159,124,60,149,97,27,130,110,564,	0,4636,7212,49219,50017,108636,230625,235311,242837,245310,
#Partially deleted in new
chr2	191950016	192195709	chr2:191950016-192195709	3	-	191950310	192194524	0	10	391,159,124,60,149,97,27,130,110,1357,	0,3662,6238,48245,49043,107662,229651,234337,241863,244336,
#Deleted in new
chr2	191992663	191999205	chr2:191992663-191999205	0	-	191992663	191992663	8553170	3	72,60,146,	0,5598,6396,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	192021911	192029036	chr2:192021911-192029036	1	+	192021911	192021911	8553170	3	61,82,134,	0,5960,6991,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	192028569	192030628	chr2:192028569-192030628	0	+	192028569	192028569	8553170	2	829,47,	0,2012,
#Deleted in new
chr2	192030337	192032020	chr2:192030337-192032020	1	+	192030337	192030337	8553170	2	343,689,	0,994,
#Partially deleted in new
chr2	192030604	192037085	chr2:192030604-192037085	0	+	192030604	192030604	8553170	3	76,192,401,	0,4089,6080,
#Partially deleted in new
chr2	192030604	192035407	chr2:192030604-192035407	1	+	192030604	192030604	8553170	5	76,272,68,192,202,	0,727,1966,4089,4601,
#Partially deleted in new
chr2	192030604	192035380	chr2:192030604-192035380	0	+	192030604	192030604	8553170	5	76,160,68,192,175,	0,727,1966,4089,4601,
#Partially deleted in new
chr2	192030604	192036255	chr2:192030604-192036255	0	+	192030604	192030604	8553170	5	103,68,192,202,124,	0,1966,4089,4601,5527,
#Partially deleted in new
chr2	192030604	192036747	chr2:192030604-192036747	0	+	192030604	192030604	8553170	5	76,192,202,234,63,	0,4089,4601,5527,6080,
#Partially deleted in new
chr2	192030604	192036872	chr2:192030604-192036872	0	+	192030604	192030604	8553170	4	76,192,202,188,	0,4089,4601,6080,
#Partially deleted in new
chr2	192030608	192036333	chr2:192030608-192036333	0	+	192030608	192030608	8553170	5	72,68,192,202,78,	0,1962,4085,4597,5647,
#Partially deleted in new
chr2	192030612	192036333	chr2:192030612-192036333	0	+	192030612	192030612	8553170	5	68,272,192,202,78,	0,719,4081,4593,5643,
#Partially deleted in new
chr2	192032367	192035380	chr2:192032367-192035380	0	+	192032367	192032367	8553170	3	271,192,175,	0,2326,2838,
#Deleted in new
chr2	192035209	192037121	chr2:192035209-192037121	1	+	192035209	192035209	8553170	4	198,234,162,114,	0,922,1475,1798,
#Deleted in new
chr2	192035255	192037103	chr2:192035255-192037103	0	+	192035255	192035255	8553170	3	152,234,419,	0,876,1429,
#Deleted in new
chr2	192036169	192038059	chr2:192036169-192038059	1	+	192036169	192036169	8553170	4	196,162,79,187,	0,515,838,1703,
#Partially deleted in new
chr2	192176742	192194524	chr2:192176742-192194524	1	-	192179578	192194524	0	4	2952,130,110,172,	0,7611,15137,17610,
#Partially deleted in new
chr2	192629918	192645706	chr2:192629918-192645706	3	+	192629918	192629918	8553170	2	96,469,	0,15319,
#Deleted in new
chr2	192644101	192645387	chr2:192644101-192645387	3	-	192644101	192644101	8553170	2	506,120,	0,1166,
#Deleted in new
chr2	192644101	192645383	chr2:192644101-192645383	0	-	192644101	192644101	8553170	2	506,79,	0,1203,
#Partially deleted in new
chr2	192749844	192776899	chr2:192749844-192776899	3	+	192749844	192749844	789624	3	184,84,1322,	0,944,25733,
#Deleted in new
chr2	192774081	192774416	chr2:192774081-192774416	7	+	192774081	192774081	16724991	1	335,	0,
#Deleted in new
chr2	192775942	192776073	chr2:192775942-192776073	3	+	192775942	192775942	8553170	1	131,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	193256482	193257757	chr2:193256482-193257757	7	+	193256482	193256482	16724991	1	1275,	0,
#Deleted in new
chr2	193276667	193277614	chr2:193276667-193277614	7	-	193276667	193276667	16724991	1	947,	0,
#Deleted in new
chr2	193730554	193730689	chr2:193730554-193730689	7	-	193730554	193730554	16724991	1	135,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	193898366	193899394	chr2:193898366-193899394	3	+	193898366	193898366	8553170	1	1028,	0,
#Deleted in new
chr2	194027918	194028164	chr2:194027918-194028164	7	+	194027918	194027918	16724991	1	246,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	194129353	194130266	chr2:194129353-194130266	7	-	194129353	194129353	16724991	1	913,	0,
#Deleted in new
chr2	194187378	194188309	chr2:194187378-194188309	7	+	194187378	194187378	16724991	1	931,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	194344268	194386506	chr2:194344268-194386506	1	+	194344268	194344268	8553170	5	51,232,127,126,346,	0,24572,29867,32943,41892,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	194344268	194390927	chr2:194344268-194390927	0	+	194344268	194344268	8553170	5	51,232,127,126,89,	0,24572,29867,32943,46570,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	194344281	194419645	chr2:194344281-194419645	3	+	194344281	194344281	789624	6	38,232,127,126,223,338,	0,24559,29854,32930,71914,75026,
#Partially deleted in new
chr2	194454580	194455142	chr2:194454580-194455142	7	-	194454580	194454580	16724991	1	562,	0,
#Partially deleted in new
chr2	194658375	194658675	chr2:194658375-194658675	3	-	194658375	194658375	8553170	1	300,	0,
#Partially deleted in new
chr2	194664106	194664174	chr2:194664106-194664174	3	-	194664106	194664106	8553170	1	68,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	194730594	194761435	chr2:194730594-194761435	3	+	194730594	194730594	789624	4	109,302,175,2266,	0,5430,13929,28575,
#Partially deleted in new
chr2	195003710	195026370	chr2:195003710-195026370	3	-	195003710	195003710	8553170	2	882,146,	0,22514,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	195448531	195478925	chr2:195448531-195478925	3	+	195448531	195448531	8553170	4	81,132,188,588,	0,6978,9544,29806,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	195451777	195515699	chr2:195451777-195515699	3	-	195451777	195451777	8553170	3	144,96,263,	0,34907,63659,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	195514035	195514142	chr2:195514035-195514142	3	+	195514035	195514035	8553170	1	107,	0,
#Partially deleted in new
chr2	195533034	195538681	chr2:195533034-195538681	3	+	195533034	195533034	8553170	2	209,641,	0,5006,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	195569627	195572970	chr2:195569627-195572970	3	-	195569627	195569627	8553170	2	235,320,	0,3023,
#Partially deleted in new
chr2	195575976	195680420	chr2:195575976-195680420	0	+	195680042	195680420	789624	3	106,98,389,	0,30159,104055,
#Deleted in new
chr2	195582793	195584031	chr2:195582793-195584031	7	-	195582793	195582793	16724991	1	1238,	0,
#Partially deleted in new
chr2	195656746	195737702	chr2:195656746-195737702	3	+	195680042	195735041	789624	10	264,1019,208,170,189,121,369,81,191,2820,	0,23285,26952,49869,51909,56686,59890,61505,71412,78136,
#Partially deleted in new
chr2	195656910	195706676	chr2:195656910-195706676	0	+	195680042	195681006	789624	5	100,17,158,208,61,	0,23121,23982,26788,49705,
#Partially deleted in new
chr2	195657127	195737702	chr2:195657127-195737702	1	+	195680042	195735041	789624	10	154,1019,208,170,189,121,369,81,191,2820,	0,22904,26571,49488,51528,56305,59509,61124,71031,77755,
#Partially deleted in new
chr2	195657127	195737702	chr2:195657127-195737702	0	+	195680042	195681006	789624	11	154,17,158,208,170,189,121,369,81,191,2820,	0,22904,23765,26571,49488,51528,56305,59509,61124,71031,77755,
#Partially deleted in new
chr2	195657135	195680158	chr2:195657135-195680158	0	+	195680042	195680158	789624	3	146,64,127,	0,14521,22896,
#Deleted in new
chr2	195657234	195658587	chr2:195657234-195658587	0	+	195657234	195657234	8553170	2	47,524,	0,829,
#Partially deleted in new
chr2	195657448	195680433	chr2:195657448-195680433	0	+	195680042	195680433	789624	2	161,402,	0,22583,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	195670371	195670474	chr2:195670371-195670474	3	-	195670371	195670371	8553170	1	103,	0,
#Partially deleted in new
chr2	195680476	195717383	chr2:195680476-195717383	0	+	195680476	195680476	8553170	6	574,208,170,189,121,747,	0,3222,26139,28179,32956,36160,
#Partially deleted in new
chr2	195737702	196068812	chr2:195737702-196068812	3	-	195737920	196068711	789624	65	425,104,178,153,231,138,186,162,201,162,177,93,195,127,336,134,191,155,164,186,181,347,331,230,873,220,127,169,156,198,225,132,177,183,150,249,99,213,128,103,169,110,213,141,199,194,187,686,147,225,79,128,273,180,184,120,126,76,181,88,148,109,63,63,116,	0,3063,16634,18430,33957,38143,40097,49307,56635,58873,61593,69037,70979,72042,78925,79993,86552,96503,107299,115640,118108,119674,120771,124014,126446,134547,135865,137972,138841,144092,146882,148438,150555,151096,153952,157273,159964,162579,168956,169204,172324,184385,185892,188723,196888,198896,219558,222557,232245,234539,246929,249363,250254,263001,263972,275084,281467,286726,289057,290257,309649,310593,313484,320351,330994,
#Partially deleted in new
chr2	195737702	195795879	chr2:195737702-195795879	1	-	195737920	195794502	789624	10	425,104,178,153,231,138,186,162,201,67,	0,3063,16634,18430,33957,38143,40097,49307,56635,58110,
#Partially deleted in new
chr2	195737756	195741131	chr2:195737756-195741131	0	-	195737756	195737756	8553170	2	371,366,	0,3009,
#Partially deleted in new
chr2	195737996	195756198	chr2:195737996-195756198	0	-	195738126	195756198	789624	3	131,104,66,	0,2769,18136,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	195817697	195834429	chr2:195817697-195834429	0	-	195817697	195817697	8553170	4	132,191,148,224,	0,6557,7264,16508,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	195892478	195905762	chr2:195892478-195905762	0	-	195892478	195892478	8553170	3	2746,99,5481,	0,5188,7803,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	195994258	195995680	chr2:195994258-195995680	7	-	195994258	195994258	16724991	1	1422,	0,
#Partially deleted in new
chr2	195998759	196068812	chr2:195998759-196068812	1	-	195999089	196068711	789624	13	483,180,184,120,126,76,181,88,148,109,63,63,116,	0,1944,2915,14027,20410,25669,28000,29200,48592,49536,52427,59294,69937,
#Partially deleted in new
chr2	196028007	196068487	chr2:196028007-196068487	0	-	196028007	196058056	789624	6	40,148,109,63,63,136,	0,19344,20288,23179,30046,40344,
#Deleted in new
chr2	196063311	196063963	chr2:196063311-196063963	7	-	196063311	196063311	16724991	1	652,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	196133565	196171575	chr2:196133565-196171575	1	-	196137446	196163383	0	8	4164,180,49,127,145,213,166,243,	0,6054,7683,9994,12345,22873,29696,37767,
#Partially deleted in new
chr2	196137446	196176503	chr2:196137446-196176503	3	-	196137446	196163383	0	8	283,180,49,127,145,213,166,278,	0,2173,3802,6113,8464,18992,25815,38779,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	196151262	196154881	chr2:196151262-196154881	3	+	196151262	196151262	8553170	2	246,1819,	0,1800,
#Deleted in new
chr2	196156085	196156647	chr2:196156085-196156647	0	-	196156437	196156647	789624	1	562,	0,
#Partially deleted in new
chr2	196156571	196176327	chr2:196156571-196176327	0	-	196156571	196163383	789624	4	80,166,159,102,	0,6690,17677,19654,
#Partially deleted in new
chr2	196163363	196171000	chr2:196163363-196171000	0	-	196163363	196163383	8553170	4	64,152,184,167,	0,2219,2730,7470,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	196189098	196195404	chr2:196189098-196195404	0	-	196189098	196189098	8553170	2	251,133,	0,6173,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr2	196194071	196592684	chr2:196194071-196592684	3	-	196201276	196433423	0	29	7317,113,86,115,147,130,99,153,114,121,110,84,97,103,135,186,125,104,151,96,1353,101,143,170,76,95,108,327,221,	0,21793,22936,25967,26723,28139,31700,34030,46377,48012,59848,63751,77121,79949,84456,98493,112416,113058,113863,123202,124480,126267,128406,130908,135503,140352,149585,239060,398392,
#Partially deleted in new
chr2	196199250	196362222	chr2:196199250-196362222	0	-	196325007	196343663	0	27	2138,113,86,115,147,130,99,153,114,121,110,84,97,103,135,186,125,104,151,96,1353,143,99,76,95,108,411,	0,16614,17757,20788,21544,22960,26521,28851,41198,42833,54669,58572,71942,74770,79277,93314,107237,107879,108684,118023,119301,123227,125729,130324,135173,144406,162561,
#Partially deleted in new
chr2	196199255	196592805	chr2:196199255-196592805	1	-	196201276	196433423	789624	29	2133,113,86,115,147,130,99,153,114,121,110,84,97,103,135,186,125,104,151,96,1374,101,143,170,76,95,108,327,34,	0,16609,17752,20783,21539,22955,26516,28846,41193,42828,54664,58567,71937,74765,79272,93309,107232,107874,108679,118018,119296,121083,123222,125724,130319,135168,144401,233876,393516,
#Partially deleted in new
chr2	196199271	196318697	chr2:196199271-196318697	0	-	196201276	196318697	789624	20	2117,113,86,115,147,130,99,153,114,121,110,97,103,135,186,125,104,151,96,146,	0,16593,17736,20767,21523,22939,26500,28830,41177,42812,54648,71921,74749,79256,93293,107216,107858,108663,118002,119280,
#Partially deleted in new
chr2	196199274	196218259	chr2:196199274-196218259	0	-	196199274	196199274	8553170	3	2114,113,1252,	0,16590,17733,
#Partially deleted in new
chr2	196199336	196586729	chr2:196199336-196586729	1	-	196201276	196433423	0	29	2052,113,86,115,147,130,99,153,114,121,110,84,97,103,135,186,125,104,151,96,1353,101,143,170,76,95,108,327,222,	0,16528,17671,20702,21458,22874,26435,28765,41112,42747,54583,58486,71856,74684,79191,93228,107151,107793,108598,117937,119215,121002,123141,125643,130238,135087,144320,233795,387171,
#Partially deleted in new
chr2	196199350	196593692	chr2:196199350-196593692	1	-	196201276	196433423	0	29	2038,113,86,115,147,130,99,153,114,121,110,84,97,103,135,186,125,104,151,96,1353,101,143,170,76,95,108,327,185,	0,16514,17657,20688,21444,22860,26421,28751,41098,42733,54569,58472,71842,74670,79177,93214,107137,107779,108584,117923,119201,120988,123127,125629,130224,135073,144306,233781,394157,
#Partially deleted in new
chr2	196222229	196258101	chr2:196222229-196258101	0	-	196222229	196222229	8553170	8	111,99,153,114,121,110,84,92,	0,3542,5872,18219,19854,31690,35593,35780,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	196238493	196242826	chr2:196238493-196242826	0	-	196238493	196238493	8553170	2	2069,743,	0,3590,
#Partially deleted in new
chr2	196257735	196278679	chr2:196257735-196278679	0	-	196257735	196257735	8553170	4	171,97,103,152,	0,13457,16285,20792,
#Partially deleted in new
chr2	196260023	196263559	chr2:196260023-196263559	1	+	196260023	196260023	789624	3	217,42,509,	0,307,3027,
#Partially deleted in new
chr2	196260113	196264204	chr2:196260113-196264204	3	+	196260113	196260113	8553170	2	259,1154,	0,2937,
#Partially deleted in new
chr2	196260432	196263629	chr2:196260432-196263629	0	+	196260432	196260432	8553170	2	104,579,	0,2618,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	196269305	196278692	chr2:196269305-196278692	0	-	196269305	196269305	8553170	4	187,97,103,165,	0,1887,4715,9222,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	196288020	196308156	chr2:196288020-196308156	0	-	196288020	196288020	8553170	4	4730,125,104,222,	0,18467,19109,19914,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	196289408	196289707	chr2:196289408-196289707	3	+	196289408	196289408	8553170	1	299,	0,
#Partially deleted in new
chr2	196315780	196593684	chr2:196315780-196593684	0	-	196315780	196315780	8553170	10	1589,1353,101,143,170,76,95,108,327,177,	0,2771,4558,6697,9199,13794,18643,27876,117351,277727,
#Partially deleted in new
chr2	196322477	196361832	chr2:196322477-196361832	0	-	196322477	196322477	8553170	6	143,111,76,95,108,21,	0,2502,7097,11946,21179,39334,
#Partially deleted in new
chr2	196322611	196361973	chr2:196322611-196361973	0	-	196322611	196322611	8553170	6	9,170,76,95,108,162,	0,2368,6963,11812,21045,39200,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	196343696	196593554	chr2:196343696-196593554	0	-	196343696	196433423	789624	4	68,327,132,47,	0,89435,149547,249811,
#Partially deleted in new
chr2	196638421	196639497	chr2:196638421-196639497	3	-	196638421	196638421	8553170	2	146,102,	0,974,
#Partially deleted in new
chr2	196639553	196732800	chr2:196639553-196732800	0	+	196639766	196658822	789624	23	225,164,69,44,93,108,125,178,69,114,72,108,129,170,94,170,127,195,69,162,87,120,355,	0,6787,19238,30279,32791,34687,36589,37000,37739,55492,61555,72591,78949,79943,81021,81968,86419,89639,90239,90403,91305,92479,92892,
#Partially deleted in new
chr2	196639631	196732806	chr2:196639631-196732806	3	+	196639766	196732562	789624	28	147,164,221,179,69,117,130,44,93,108,125,178,69,114,72,108,63,129,170,94,170,127,195,69,162,87,120,361,	0,6709,17001,17326,19160,25935,27087,30201,32713,34609,36511,36922,37661,55414,61477,72513,73045,78871,79865,80943,81890,86341,89561,90161,90325,91227,92401,92814,
#Partially deleted in new
chr2	196639631	196667934	chr2:196639631-196667934	0	+	196639631	196639631	8553170	7	147,164,221,179,69,117,1216,	0,6709,17001,17326,19160,25935,27087,
#Partially deleted in new
chr2	196639714	196657429	chr2:196639714-196657429	0	+	196639714	196639714	8553170	2	64,797,	0,16918,
#Partially deleted in new
chr2	196639714	196676268	chr2:196639714-196676268	0	+	196639714	196639714	8553170	5	64,164,93,108,126,	0,6626,32630,34526,36428,
#Partially deleted in new
chr2	196656744	196676250	chr2:196656744-196676250	0	+	196656744	196656744	8553170	7	109,179,69,44,93,108,108,	0,213,2047,13088,15600,17496,19398,
#Partially deleted in new
chr2	196676168	196695070	chr2:196676168-196695070	0	+	196676168	196676168	8553170	5	99,178,78,69,25,	0,385,946,1124,18877,
#Partially deleted in new
chr2	196677305	196719597	chr2:196677305-196719597	0	+	196677305	196677305	8553170	6	56,114,72,108,129,101,	0,17740,23803,34839,41197,42191,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	196686147	196686330	chr2:196686147-196686330	3	-	196686147	196686147	8553170	1	183,	0,
#Partially deleted in new
chr2	196695042	196729528	chr2:196695042-196729528	0	+	196695042	196695042	8553170	8	117,72,129,170,94,170,127,336,	0,6066,23460,24454,25532,26479,30930,34150,
#Partially deleted in new
chr2	196701108	196712711	chr2:196701108-196712711	0	+	196701108	196701108	8553170	2	72,567,	0,11036,
#Partially deleted in new
chr2	196713098	196732792	chr2:196713098-196732792	0	+	196713356	196720178	789624	12	585,129,88,61,94,170,127,669,162,87,120,347,	0,5404,6398,7075,7476,8423,12874,16094,16858,17760,18934,19347,
#Partially deleted in new
chr2	196713116	196732798	chr2:196713116-196732798	1	+	196713356	196732562	789624	12	567,129,170,94,170,127,195,69,162,87,120,353,	0,5386,6380,7458,8405,12856,16076,16676,16840,17742,18916,19329,
#Partially deleted in new
chr2	196713145	196732793	chr2:196713145-196732793	0	+	196713356	196729429	789624	11	538,129,170,94,170,127,669,162,87,120,348,	0,5357,6351,7429,8376,12827,16047,16811,17713,18887,19300,
#Deleted in new
chr2	196718304	196719776	chr2:196718304-196719776	0	+	196718304	196718304	8553170	2	327,280,	0,1192,
#Deleted in new
chr2	196718573	196721626	chr2:196718573-196721626	0	+	196718573	196718573	8553170	5	58,170,61,94,105,	0,923,1600,2001,2948,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	196719278	196728011	chr2:196719278-196728011	0	+	196719278	196719278	8553170	4	388,94,170,2039,	0,1296,2243,6694,
#Partially deleted in new
chr2	196719290	196729817	chr2:196719290-196729817	0	+	196719290	196719290	8553170	5	376,94,170,127,625,	0,1284,2231,6682,9902,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	196730862	196763490	chr2:196730862-196763490	0	+	196730862	196730862	8553170	4	83,120,186,236,	0,1170,31435,32392,
#Deleted in new
chr2	196732096	196732751	chr2:196732096-196732751	0	+	196732096	196732096	8553170	2	56,326,	0,329,
#Partially deleted in new
chr2	196763031	196799701	chr2:196763031-196799701	3	-	196764562	196799611	789624	18	1654,153,125,191,238,136,102,203,172,104,73,148,166,192,124,197,112,192,	0,3533,6883,8716,9884,12084,12978,13395,15864,17527,21825,22409,26172,26847,28305,29924,34765,36478,
#Partially deleted in new
chr2	196764578	196767004	chr2:196764578-196767004	0	-	196764578	196764578	8553170	2	107,440,	0,1986,
#Deleted in new
chr2	196774988	196776588	chr2:196774988-196776588	0	-	196775068	196776588	789624	3	263,102,162,	0,1021,1438,
#Partially deleted in new
chr2	196777638	196785536	chr2:196777638-196785536	0	-	196778854	196785536	789624	4	1429,104,73,96,	0,2920,7218,7802,
#Partially deleted in new
chr2	196778963	196780901	chr2:196778963-196780901	0	-	196778963	196778963	8553170	2	104,343,	0,1595,
#Partially deleted in new
chr2	196780088	196799659	chr2:196780088-196799659	1	-	196780534	196799611	789624	9	574,73,148,166,192,124,197,112,150,	0,4768,5352,9115,9790,11248,12867,17708,19421,
#Partially deleted in new
chr2	196790032	196799515	chr2:196790032-196799515	0	-	196799494	196799515	8553170	6	38,124,197,112,15,61,	0,1304,2923,7764,9207,9422,
#Partially deleted in new
chr2	196792950	196799628	chr2:196792950-196799628	0	-	196799494	196799628	789624	3	202,112,174,	0,4846,6504,
#Partially deleted in new
chr2	196792954	196799725	chr2:196792954-196799725	0	-	196799494	196799611	789624	3	198,112,486,	0,4842,6285,
#Partially deleted in new
chr2	196805001	196810276	chr2:196805001-196810276	3	-	196807442	196809387	789624	3	407,199,1063,	0,2422,4212,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	196831974	196832190	chr2:196831974-196832190	3	-	196831974	196831974	8553170	1	216,	0,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr2	196833003	196926731	chr2:196833003-196926731	3	-	196841233	196926616	789624	27	8369,105,188,51,136,198,91,94,39,109,67,52,74,76,78,52,47,84,56,106,67,53,158,172,176,154,262,	0,9717,10884,11520,12878,13999,14943,31983,37937,39437,39956,40524,40681,42742,47072,52420,52830,57824,59342,60136,64127,65313,69581,79878,83414,86993,93466,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr2	196835183	196926655	chr2:196835183-196926655	0	-	196922180	196926616	789624	28	6189,105,188,51,136,198,91,94,39,109,67,52,74,76,78,52,47,84,56,106,67,53,158,172,176,154,84,186,	0,7537,8704,9340,10698,11819,12763,29803,35757,37257,37776,38344,38501,40562,44892,50240,50650,55644,57162,57956,61947,63133,67401,77698,81234,84813,86919,91286,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	196835589	196845983	chr2:196835589-196845983	0	-	196841233	196845983	789624	4	5783,188,51,102,	0,8298,8934,10292,
#Partially deleted in new
chr2	196837870	196842825	chr2:196837870-196842825	0	-	196837870	196837870	8553170	2	659,105,	0,4850,
#Partially deleted in new
chr2	196841338	196926740	chr2:196841338-196926740	0	-	196841338	196841338	8553170	22	34,105,188,51,136,1035,94,39,109,67,52,74,76,78,52,47,84,56,106,67,53,271,	0,1382,2549,3185,4543,5664,23648,29602,31102,31621,32189,32346,34407,38737,44085,44495,49489,51007,51801,55792,56978,85131,
#Partially deleted in new
chr2	196847475	196926730	chr2:196847475-196926730	1	-	196848025	196926616	789624	20	562,39,109,67,52,74,76,78,52,47,84,56,106,67,53,158,172,176,154,261,	0,23465,24965,25484,26052,26209,28270,32600,37948,38358,43352,44870,45664,49655,50841,55109,65406,68942,72521,78994,
#Deleted in new
chr2	196872625	196873956	chr2:196872625-196873956	0	-	196872625	196872625	8553170	3	401,52,272,	0,902,1059,
#Partially deleted in new
chr2	196872959	196890857	chr2:196872959-196890857	0	-	196872959	196872959	8553170	9	67,52,74,76,64,78,52,47,30,	0,568,725,2786,4613,7116,12464,12874,17868,
#Partially deleted in new
chr2	196885452	196927795	chr2:196885452-196927795	1	-	196890903	196927610	789624	11	23,47,84,106,67,53,158,172,176,154,206,	0,381,5375,7687,11678,12864,17132,27429,30965,34544,42137,
#Partially deleted in new
chr2	196885845	196926745	chr2:196885845-196926745	0	-	196885845	196926616	789624	7	35,84,56,106,67,53,276,	0,4982,6500,7294,11285,12471,40624,
#Partially deleted in new
chr2	196890866	196927796	chr2:196890866-196927796	0	-	196890866	196890866	8553170	10	45,106,67,53,158,172,176,154,84,207,	0,2273,6264,7450,11718,22015,25551,29130,31236,36723,
#Partially deleted in new
chr2	196967016	197122733	chr2:196967016-197122733	0	-	196967438	197122733	789624	22	430,92,83,83,146,84,88,217,118,88,202,72,112,81,141,69,118,83,115,79,213,84,	0,26566,28362,31320,31890,33402,34736,38677,40789,41927,46494,58179,111686,114628,116352,119663,121694,122933,132799,143749,154315,155633,
#Partially deleted in new
chr2	196986674	197310646	chr2:196986674-197310646	1	-	196990679	197310604	789624	28	4253,92,83,83,146,84,88,217,118,88,202,72,112,81,141,69,64,83,115,79,213,143,88,201,71,79,84,69,	0,6908,8704,11662,12232,13744,15078,19019,21131,22269,26836,38521,92028,94970,96694,100005,102036,103275,113141,124091,134657,135975,138706,139162,149917,160352,200348,323903,
#Partially deleted in new
chr2	196987487	197310666	chr2:196987487-197310666	3	-	196989590	197310604	789624	28	2162,92,83,83,146,84,88,217,118,88,202,72,112,81,141,69,64,83,115,79,213,143,88,201,71,79,84,89,	0,6095,7891,10849,11419,12931,14265,18206,20318,21456,26023,37708,91215,94157,95881,99192,101223,102462,112328,123278,133844,135162,137893,138349,149104,159539,199535,323090,
#Deleted in new
chr2	196992677	196993638	chr2:196992677-196993638	0	-	196992677	196992677	8553170	2	131,56,	0,905,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr2	196994525	197198038	chr2:196994525-197198038	1	-	196995374	197187058	789624	26	936,83,146,84,88,217,118,88,202,72,112,81,141,69,64,83,115,79,213,143,88,201,71,79,84,29,	0,3811,4381,5893,7227,11168,13280,14418,18985,30670,84177,87119,88843,92154,94185,95424,105290,116240,126806,128124,130855,131311,142066,152501,192497,203484,
#Partially deleted in new
chr2	197013510	197110844	chr2:197013510-197110844	0	-	197013510	197110844	789624	9	202,72,112,81,141,64,83,115,79,	0,11685,65192,68134,69858,75200,76439,86305,97255,
#Deleted in new
chr2	197014989	197016015	chr2:197014989-197016015	7	+	197014989	197014989	16724991	1	1026,	0,
#Partially deleted in new
chr2	197028710	197030143	chr2:197028710-197030143	7	-	197028710	197028710	16724991	2	231,884,	0,549,
#Partially deleted in new
chr2	197077811	197310787	chr2:197077811-197310787	1	-	197078612	197310604	789624	16	1003,81,141,69,64,83,115,79,213,143,88,201,71,79,84,210,	0,3833,5557,8868,10899,12138,22004,32954,43520,44838,47569,48025,58780,69215,109211,232766,
#Partially deleted in new
chr2	197081690	197088875	chr2:197081690-197088875	0	-	197081690	197081690	8553170	4	35,141,69,165,	0,1678,4989,7020,
#Partially deleted in new
chr2	197088748	197110830	chr2:197088748-197110830	0	-	197088748	197088748	8553170	4	26,83,115,65,	0,1201,11067,22017,
#Partially deleted in new
chr2	197099476	197310787	chr2:197099476-197310787	1	-	197099811	197310604	789624	10	454,79,213,143,88,201,71,79,84,210,	0,11289,21855,23173,25904,26360,37115,47550,87546,211101,
#Partially deleted in new
chr2	197125836	197310797	chr2:197125836-197310797	0	-	197136650	197310604	789624	4	201,71,84,220,	0,10755,61186,184741,
#Partially deleted in new
chr2	197125994	197311173	chr2:197125994-197311173	0	-	197125994	197187058	789624	5	43,71,79,84,49,	0,10597,21032,61028,185130,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	197133970	197310780	chr2:197133970-197310780	0	-	197133970	197133970	8553170	4	2692,79,84,203,	0,13056,53052,176607,
#Partially deleted in new
chr2	197197990	197199273	chr2:197197990-197199273	3	+	197197990	197197990	789624	2	99,356,	0,927,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	197250857	197302519	chr2:197250857-197302519	3	-	197250857	197250857	789624	6	135,95,47,54,451,287,	0,45447,45668,48624,50105,51375,
#Deleted in new
chr2	197263110	197263535	chr2:197263110-197263535	7	+	197263110	197263110	16724991	1	425,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	197311392	197312740	chr2:197311392-197312740	3	+	197311392	197311392	8553170	2	215,237,	0,1111,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	197379700	197380892	chr2:197379700-197380892	7	-	197379700	197379700	16724991	2	617,248,	0,944,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr2	197389783	197435091	chr2:197389783-197435091	3	-	197392302	197434999	0	25	2678,217,273,132,121,112,183,222,126,147,146,271,87,180,102,198,122,213,238,171,80,115,105,167,120,	0,3188,6272,8201,8677,10271,10468,10931,11616,11958,12201,12772,13165,13801,15292,15491,18214,18585,19986,26957,28725,30644,31245,34024,45188,
#Partially deleted in new
chr2	197392254	197393351	chr2:197392254-197393351	0	-	197392254	197392254	8553170	2	207,380,	0,717,
#Partially deleted in new
chr2	197393051	197399028	chr2:197393051-197399028	0	-	197393051	197399028	789624	5	137,273,132,121,60,	0,3004,4933,5409,5917,
#Deleted in new
chr2	197397953	197398772	chr2:197397953-197398772	0	-	197397953	197397953	8553170	2	163,312,	0,507,
#Deleted in new
chr2	197402021	197402452	chr2:197402021-197402452	0	-	197402021	197402021	8553170	2	109,32,	0,399,
#Deleted in new
chr2	197404717	197404854	chr2:197404717-197404854	3	+	197404717	197404717	8553170	1	137,	0,
#Deleted in new
chr2	197407935	197408694	chr2:197407935-197408694	0	-	197407935	197407935	8553170	2	184,326,	0,433,
#Partially deleted in new
chr2	197409782	197420115	chr2:197409782-197420115	0	-	197409782	197409782	8553170	3	225,171,1607,	0,6958,8726,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	197416593	197418962	chr2:197416593-197418962	0	-	197416593	197416593	8553170	2	318,454,	0,1915,
#Partially deleted in new
chr2	197416890	197435027	chr2:197416890-197435027	1	-	197418931	197434999	0	7	21,80,56,115,105,167,56,	0,1618,2005,3537,4138,6917,18081,
#Partially deleted in new
chr2	197418795	197435079	chr2:197418795-197435079	1	-	197418931	197434999	0	5	156,115,105,167,108,	0,1632,2233,5012,16176,
#Partially deleted in new
chr2	197418795	197435079	chr2:197418795-197435079	1	-	197420377	197434999	789624	4	1747,105,167,108,	0,2233,5012,16176,
#Partially deleted in new
chr2	197420180	197435016	chr2:197420180-197435016	0	-	197421128	197434999	789624	4	362,105,81,45,	0,848,3713,14791,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	197453422	197475308	chr2:197453422-197475308	3	+	197453560	197473924	789624	5	242,150,193,102,1552,	0,6509,9116,16647,20334,
#Partially deleted in new
chr2	197453492	197474168	chr2:197453492-197474168	1	+	197453560	197473924	789624	4	172,193,102,412,	0,9046,16577,20264,
#Partially deleted in new
chr2	197453763	197459997	chr2:197453763-197459997	0	+	197453763	197453763	8553170	2	483,66,	0,6168,
#Partially deleted in new
chr2	197453793	197474410	chr2:197453793-197474410	1	+	197454029	197473924	789624	5	256,150,193,102,654,	0,6138,8745,16276,19963,
#Partially deleted in new
chr2	197486580	197500047	chr2:197486580-197500047	1	-	197487045	197498848	0	12	618,179,175,246,100,169,94,96,83,253,176,266,	0,1277,1736,2421,3616,6743,7576,8076,8713,10559,12094,13201,
#Partially deleted in new
chr2	197486585	197500274	chr2:197486585-197500274	3	-	197487045	197498848	0	12	613,179,175,246,100,169,94,96,83,253,176,115,	0,1272,1731,2416,3611,6738,7571,8071,8708,10554,12089,13574,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	197487973	197490572	chr2:197487973-197490572	0	-	197487973	197487973	8553170	4	63,175,246,376,	0,343,1028,2223,
#Partially deleted in new
chr2	197493319	197494474	chr2:197493319-197494474	0	-	197493319	197493319	8553170	2	173,318,	0,837,
#Partially deleted in new
chr2	197494147	197500208	chr2:197494147-197500208	0	-	197494147	197498848	789624	6	103,90,83,253,176,49,	0,515,1146,2992,4527,6012,
#Partially deleted in new
chr2	197494149	197497507	chr2:197494149-197497507	0	-	197494149	197494149	8553170	4	101,96,83,368,	0,507,1144,2990,
#Partially deleted in new
chr2	197494193	197500221	chr2:197494193-197500221	0	-	197494193	197498848	789624	6	57,96,83,253,176,223,	0,463,1100,2946,4481,5805,
#Partially deleted in new
chr2	197494639	197499822	chr2:197494639-197499822	0	-	197497372	197498848	789624	5	113,83,253,129,41,	0,654,2500,4082,5142,
#Partially deleted in new
chr2	197495050	197499879	chr2:197495050-197499879	0	-	197495050	197495050	8553170	4	326,253,176,98,	0,2089,3624,4731,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	197496890	197499817	chr2:197496890-197499817	0	-	197496890	197496890	8553170	3	502,176,36,	0,1784,2891,
#Partially deleted in new
chr2	197497167	197516737	chr2:197497167-197516737	0	-	197497167	197516733	789624	3	225,176,128,	0,1507,19442,
#Partially deleted in new
chr2	197497284	197499866	chr2:197497284-197499866	0	-	197497284	197498848	789624	4	108,176,180,85,	0,1390,1974,2497,
#Partially deleted in new
chr2	197497316	197499835	chr2:197497316-197499835	0	-	197497316	197498848	789624	4	76,176,272,54,	0,1358,1850,2465,
#Deleted in new
chr2	197498673	197499840	chr2:197498673-197499840	0	-	197498673	197498848	789624	3	177,297,59,	0,468,1108,
#Partially deleted in new
chr2	197499993	197503457	chr2:197499993-197503457	3	+	197500436	197503259	0	4	446,165,90,249,	0,1080,3045,3215,
#Partially deleted in new
chr2	197500139	197503296	chr2:197500139-197503296	1	+	197500436	197503259	789624	3	300,90,88,	0,2899,3069,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	197500348	197501551	chr2:197500348-197501551	0	+	197500348	197500348	8553170	2	91,478,	0,725,
#Partially deleted in new
chr2	197500378	197503382	chr2:197500378-197503382	1	+	197500436	197503176	789624	3	61,165,344,	0,695,2660,
#Partially deleted in new
chr2	197500412	197550726	chr2:197500412-197550726	3	+	197500436	197550646	789624	9	27,165,63,101,43,87,80,112,212,	0,661,23211,35117,39698,39938,47923,49862,50102,
#Deleted in new
chr2	197500437	197501129	chr2:197500437-197501129	0	+	197500437	197500437	8553170	2	481,56,	0,636,
#Partially deleted in new
chr2	197500542	197503381	chr2:197500542-197503381	0	+	197500542	197500542	8553170	3	376,90,173,	0,2496,2666,
#Partially deleted in new
chr2	197500881	197503381	chr2:197500881-197503381	0	+	197500881	197500881	8553170	2	357,343,	0,2157,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	197515570	197553699	chr2:197515570-197553699	1	+	197523659	197550646	789624	8	114,63,101,43,87,80,112,3185,	0,8053,19959,24540,24780,32765,34704,34944,
#Partially deleted in new
chr2	197515580	197550816	chr2:197515580-197550816	1	+	197540380	197550646	789624	7	104,101,43,87,80,112,302,	0,19949,24530,24770,32755,34694,34934,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	197515831	197553699	chr2:197515831-197553699	3	+	197516086	197550646	789624	8	315,63,101,43,87,80,112,3185,	0,7792,19698,24279,24519,32504,34443,34683,
#Partially deleted in new
chr2	197516046	197551012	chr2:197516046-197551012	1	+	197516086	197550646	789624	7	100,101,43,87,80,112,498,	0,19483,24064,24304,32289,34228,34468,
#Partially deleted in new
chr2	197516073	197551254	chr2:197516073-197551254	0	+	197516086	197540125	789624	7	73,63,43,87,80,112,740,	0,7550,24037,24277,32262,34201,34441,
#Partially deleted in new
chr2	197516073	197550764	chr2:197516073-197550764	0	+	197516073	197516073	8553170	5	73,43,87,112,250,	0,24037,24277,34201,34441,
#Partially deleted in new
chr2	197516083	197551183	chr2:197516083-197551183	0	+	197516086	197540130	789624	7	63,76,43,87,80,112,669,	0,19446,24027,24267,32252,34191,34431,
#Partially deleted in new
chr2	197516159	197551279	chr2:197516159-197551279	1	+	197523659	197550646	789624	8	196,63,101,43,87,80,112,765,	0,7464,19370,23951,24191,32176,34115,34355,
#Partially deleted in new
chr2	197533802	197533965	chr2:197533802-197533965	7	+	197533802	197533802	16724991	1	163,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	197568223	197675995	chr2:197568223-197675995	3	-	197572007	197675458	789624	9	4057,79,104,122,210,280,115,184,676,	0,27767,47652,49576,62787,65494,75934,78259,107096,
#Partially deleted in new
chr2	197571734	197618021	chr2:197571734-197618021	0	-	197571734	197571734	8553170	4	546,79,104,222,	0,24256,44141,46065,
#Partially deleted in new
chr2	197572005	197617895	chr2:197572005-197617895	0	-	197572007	197617895	789624	5	275,30,79,104,96,	0,15986,23985,43870,45794,
#Partially deleted in new
chr2	197644246	197676045	chr2:197644246-197676045	0	-	197644246	197675458	789624	4	26,184,147,227,	0,2236,31073,31572,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	197705368	197708387	chr2:197705368-197708387	3	+	197705405	197707187	789624	1	3019,	0,
#Partially deleted in new
chr2	197726878	197786312	chr2:197726878-197786312	1	-	197728554	197778999	789624	9	1700,99,129,48,72,128,92,144,330,	0,16182,29549,30474,39653,44976,52096,54843,59104,
#Partially deleted in new
chr2	197726878	197786574	chr2:197726878-197786574	3	-	197728554	197786003	789624	11	1700,99,129,48,72,128,76,55,92,144,592,	0,16182,29549,30474,39653,44976,48786,50180,52096,54843,59104,
#Partially deleted in new
chr2	197726878	197785350	chr2:197726878-197785350	1	-	197728554	197781850	789624	11	1700,99,129,48,72,128,76,55,92,144,295,	0,16182,29549,30474,39653,44976,48786,50180,52096,54843,58177,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	197726878	197785010	chr2:197726878-197785010	1	-	197728466	197781850	789624	12	1696,99,129,48,66,72,128,76,55,92,144,382,	0,16182,29549,30474,32063,39653,44976,48786,50180,52096,54843,57750,
#Partially deleted in new
chr2	197728248	197786312	chr2:197728248-197786312	0	-	197771975	197786003	789624	9	330,99,129,48,72,128,92,144,330,	0,14812,28179,29104,38283,43606,50726,53473,57734,
#Partially deleted in new
chr2	197728251	197756445	chr2:197728251-197756445	0	-	197728251	197728251	8553170	4	327,99,32,18,	0,14809,27678,28176,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	197728533	197785010	chr2:197728533-197785010	1	-	197728554	197781850	789624	11	45,99,129,48,72,128,76,55,92,144,382,	0,14527,27894,28819,37998,43321,47131,48525,50441,53188,56095,
#Deleted in new
chr2	197786087	197786762	chr2:197786087-197786762	0	-	197786087	197786087	8553170	2	480,94,	0,581,
#Partially deleted in new
chr2	197804701	198148401	chr2:197804701-198148401	3	+	197805099	198146962	789624	6	638,2475,204,76,110,1622,	0,279056,284156,296583,299125,342078,
#Partially deleted in new
chr2	197810257	198146932	chr2:197810257-198146932	0	+	197810304	198146932	789624	6	65,2475,204,76,110,153,	0,273500,278600,291027,293569,336522,
#Partially deleted in new
chr2	198083748	198149884	chr2:198083748-198149884	1	+	198083748	198146962	789624	5	2484,204,76,110,3105,	0,5109,17536,20078,63031,
#Partially deleted in new
chr2	198149374	198355486	chr2:198149374-198355486	0	+	198149374	198149374	8553170	2	44,192,	0,205920,
#Partially deleted in new
chr2	198187801	198191521	chr2:198187801-198191521	3	-	198187801	198187801	8553170	2	305,213,	0,3507,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	198299362	198374549	chr2:198299362-198374549	3	-	198299362	198299362	8553170	2	2454,74,	0,75113,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	198301407	198314714	chr2:198301407-198314714	0	-	198301407	198301407	8553170	2	409,155,	0,13152,
#Partially deleted in new
chr2	198346828	198572581	chr2:198346828-198572581	0	+	198346828	198346828	8553170	5	79,113,153,124,726,	0,8466,41024,224525,225027,
#Partially deleted in new
chr2	198353685	198375116	chr2:198353685-198375116	1	-	198353685	198353685	8553170	4	131,85,142,234,	0,928,20790,21197,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	198493241	198629293	chr2:198493241-198629293	1	-	198493241	198493241	8553170	4	105,1437,62,88,	0,535,86405,135964,
#Partially deleted in new
chr2	198553194	198772356	chr2:198553194-198772356	3	-	198553194	198553194	8553170	3	344,62,98,	0,26452,219064,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	198882572	199071791	chr2:198882572-199071791	3	-	198882572	198882572	8553170	3	442,68,46,	0,188847,189173,
#Deleted in new
chr2	199108583	199110088	chr2:199108583-199110088	7	+	199108583	199108583	16724991	1	1505,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	199191058	199191120	chr2:199191058-199191120	3	+	199191058	199191058	8553170	1	62,	0,
#Partially deleted in new
chr2	199269499	199458096	chr2:199269499-199458096	1	-	199272210	199456037	0	11	3173,198,156,213,473,103,124,127,177,228,758,	0,39260,54303,59198,79201,99105,110864,112194,163838,186369,187839,
#Partially deleted in new
chr2	199269499	199465108	chr2:199269499-199465108	1	-	199272210	199456037	0	9	3173,198,156,213,473,177,228,81,273,	0,39260,54303,59198,79201,163838,186369,190952,195336,
#Partially deleted in new
chr2	199269507	199465108	chr2:199269507-199465108	1	-	199272210	199456037	0	12	3165,198,156,213,473,103,124,127,177,228,81,273,	0,39252,54295,59190,79193,99097,110856,112186,163830,186361,190944,195328,
#Partially deleted in new
chr2	199269507	199458745	chr2:199269507-199458745	1	-	199272210	199456037	789624	10	3165,198,156,213,473,103,124,127,228,1407,	0,39252,54295,59190,79193,99097,110856,112186,186361,187831,
#Partially deleted in new
chr2	199271974	199456088	chr2:199271974-199456088	1	-	199272210	199456037	0	7	698,198,156,213,473,177,220,	0,36785,51828,56723,76726,161363,183894,
#Partially deleted in new
chr2	199272149	199471266	chr2:199272149-199471266	3	-	199272210	199456037	0	12	523,198,156,213,473,103,124,127,177,228,81,253,	0,36610,51653,56548,76551,96455,108214,109544,161188,183719,188302,198864,
#Partially deleted in new
chr2	199308859	199329035	chr2:199308859-199329035	0	-	199308859	199308859	8553170	3	98,156,338,	0,14943,19838,
#Partially deleted in new
chr2	199325309	199329362	chr2:199325309-199329362	3	+	199325309	199325309	8553170	3	154,103,574,	0,685,3479,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	199346865	199368943	chr2:199346865-199368943	0	-	199346865	199346865	8553170	2	2308,339,	0,21739,
#Partially deleted in new
chr2	199368609	199423915	chr2:199368609-199423915	0	-	199368609	199368609	8553170	4	98,124,127,230,	0,11754,13084,55076,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	199395830	199457612	chr2:199395830-199457612	0	-	199397805	199456037	789624	5	1176,311,177,228,274,	0,1699,37507,60038,61508,
#Deleted in new
chr2	199456052	199465167	chr2:199456052-199465167	0	-	199456052	199456052	8553170	3	44,81,247,	0,4399,8868,
#Deleted in new
chr2	199457699	199459892	chr2:199457699-199459892	0	+	199457699	199457699	8553170	2	310,250,	0,1943,
#Partially deleted in new
chr2	199457836	199476504	chr2:199457836-199476504	3	+	199457836	199457836	8553170	4	173,93,174,28,	0,9576,10251,18640,
#Deleted in new
chr2	199468097	199472756	chr2:199468097-199472756	1	+	199468097	199468097	789624	2	164,3150,	0,1509,
#Deleted in new
chr2	199468885	199470153	chr2:199468885-199470153	0	+	199468885	199468885	8553170	2	34,547,	0,721,
#Partially deleted in new
chr2	199469895	199476935	chr2:199469895-199476935	0	+	199469895	199469895	8553170	2	2738,459,	0,6581,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	199608067	199630715	chr2:199608067-199630715	0	+	199608067	199608067	8553170	5	60,65,83,175,470,	0,16464,20996,21857,22178,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	199608067	199630487	chr2:199608067-199630487	0	+	199608067	199608067	8553170	4	60,83,175,242,	0,20996,21857,22178,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	199624530	199659132	chr2:199624530-199659132	3	+	199624530	199624530	789624	6	66,83,175,1650,183,130,	0,4533,5394,5715,23143,34472,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	199631730	199659061	chr2:199631730-199659061	0	+	199631730	199631730	8553170	4	165,126,183,59,	0,15323,15943,27272,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	199659550	199660729	chr2:199659550-199660729	7	+	199659550	199659550	16724991	1	1179,	0,
#Partially deleted in new
chr2	199760543	199851173	chr2:199760543-199851173	1	-	199760812	199848962	789624	4	292,96,122,434,	0,85531,88304,90196,
#Partially deleted in new
chr2	199760549	199850873	chr2:199760549-199850873	3	-	199844398	199848962	789624	5	286,153,96,122,115,	0,83830,85525,88298,90209,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	199785528	199848970	chr2:199785528-199848970	0	-	199785528	199785528	8553170	4	50,186,96,123,	0,34043,60546,63319,
#Partially deleted in new
chr2	199812511	199851143	chr2:199812511-199851143	1	-	199812704	199848962	789624	5	213,186,96,122,404,	0,7060,33563,36336,38228,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	199818359	199851120	chr2:199818359-199851120	1	-	199819524	199848962	789624	4	1398,96,122,381,	0,27715,30488,32380,
#Partially deleted in new
chr2	199867395	199909158	chr2:199867395-199909158	0	-	199867395	199867395	8553170	3	573,156,56,	0,15045,41707,
#Partially deleted in new
chr2	199867579	199911082	chr2:199867579-199911082	1	-	199867579	199867579	8553170	3	389,70,281,	0,41523,43222,
#Partially deleted in new
chr2	199867763	199909158	chr2:199867763-199909158	0	-	199867763	199867763	8553170	4	205,156,81,56,	0,14677,26819,41339,
#Partially deleted in new
chr2	199867774	199894658	chr2:199867774-199894658	0	-	199867774	199867774	8553170	3	194,156,216,	0,14666,26668,
#Partially deleted in new
chr2	199867777	199909158	chr2:199867777-199909158	0	-	199867777	199867777	8553170	4	191,156,132,56,	0,14663,41085,41325,
#Partially deleted in new
chr2	199867814	199909158	chr2:199867814-199909158	0	-	199867814	199867814	8553170	4	154,93,132,56,	0,13153,41048,41288,
#Partially deleted in new
chr2	199867940	199909149	chr2:199867940-199909149	0	-	199867940	199867940	8553170	4	28,156,64,47,	0,14500,16386,41162,
#Partially deleted in new
chr2	199872171	199872378	chr2:199872171-199872378	7	+	199872171	199872171	16724991	1	207,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	199878499	199909158	chr2:199878499-199909158	0	-	199878499	199878499	8553170	2	214,56,	0,30603,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	199878501	199909155	chr2:199878501-199909155	0	-	199878501	199878501	8553170	3	199,132,53,	0,30361,30601,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	199878567	199909158	chr2:199878567-199909158	0	-	199878567	199878567	8553170	3	146,132,56,	0,30295,30535,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	199878625	199909156	chr2:199878625-199909156	0	-	199878625	199878625	8553170	2	75,54,	0,30477,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	199878928	199909158	chr2:199878928-199909158	0	-	199878928	199878928	8553170	2	682,56,	0,30174,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	199879115	199909158	chr2:199879115-199909158	0	-	199879115	199879115	8553170	3	495,156,56,	0,3325,29987,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	199879125	199909158	chr2:199879125-199909158	0	-	199879125	199879125	8553170	3	485,102,56,	0,1371,29977,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	199879382	199909153	chr2:199879382-199909153	0	-	199879382	199879382	8553170	4	415,93,156,51,	0,1585,3058,29720,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	199879385	199909158	chr2:199879385-199909158	0	-	199879385	199879385	8553170	4	225,93,156,56,	0,1582,3055,29717,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	199881943	199909158	chr2:199881943-199909158	1	-	199881943	199881943	8553170	2	653,56,	0,27159,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	199882335	199894658	chr2:199882335-199894658	0	-	199882335	199882335	8553170	2	261,76,	0,12247,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	199882382	199909888	chr2:199882382-199909888	1	-	199882382	199882382	8553170	4	214,221,101,786,	0,12060,14122,26720,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	199882458	199910955	chr2:199882458-199910955	1	-	199882458	199882458	8553170	5	348,81,101,70,154,	0,12124,14046,26644,28343,
#Deleted in new
chr2	199893467	199894658	chr2:199893467-199894658	0	-	199893467	199893467	8553170	2	83,76,	0,1115,
#Partially deleted in new
chr2	199894082	199909158	chr2:199894082-199909158	1	-	199894082	199894082	8553170	3	581,101,56,	0,2422,15020,
#Partially deleted in new
chr2	199894158	199909158	chr2:199894158-199909158	0	-	199894158	199894158	8553170	2	573,56,	0,14944,
#Partially deleted in new
chr2	199894162	199909158	chr2:199894162-199909158	0	-	199894162	199894162	8553170	3	480,101,56,	0,2342,14940,
#Partially deleted in new
chr2	199894259	199909158	chr2:199894259-199909158	1	-	199894259	199894259	8553170	2	404,56,	0,14843,
#Partially deleted in new
chr2	199894267	199909158	chr2:199894267-199909158	0	-	199894267	199894267	8553170	4	375,101,98,56,	0,2237,14629,14835,
#Partially deleted in new
chr2	199894345	199909158	chr2:199894345-199909158	0	-	199894345	199894345	8553170	3	318,132,56,	0,14517,14757,
#Partially deleted in new
chr2	199894438	199909158	chr2:199894438-199909158	0	-	199894438	199894438	8553170	4	204,101,132,56,	0,2066,14424,14664,
#Partially deleted in new
chr2	199894449	199909158	chr2:199894449-199909158	0	-	199894449	199894449	8553170	3	214,98,56,	0,14447,14653,
#Partially deleted in new
chr2	199894449	199909158	chr2:199894449-199909158	0	-	199894449	199894449	8553170	4	214,101,98,56,	0,2055,14447,14653,
#Partially deleted in new
chr2	199894487	199909158	chr2:199894487-199909158	0	-	199894487	199894487	8553170	2	155,56,	0,14615,
#Partially deleted in new
chr2	199894562	199911159	chr2:199894562-199911159	0	-	199894562	199894562	8553170	3	101,70,117,	0,14540,16480,
#Partially deleted in new
chr2	199894562	199911055	chr2:199894562-199911055	0	-	199894562	199894562	8553170	3	101,70,293,	0,14540,16200,
#Partially deleted in new
chr2	199894562	199911138	chr2:199894562-199911138	0	-	199894562	199894562	8553170	4	101,98,70,114,	0,14334,14540,16462,
#Partially deleted in new
chr2	199894564	199897246	chr2:199894564-199897246	0	-	199894564	199894564	8553170	2	99,742,	0,1940,
#Partially deleted in new
chr2	199894607	199909172	chr2:199894607-199909172	0	-	199894607	199894607	8553170	4	59,223,132,70,	0,5899,14255,14495,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	199900225	199909152	chr2:199900225-199909152	0	-	199900225	199900225	8553170	2	504,50,	0,8877,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	199900233	199909140	chr2:199900233-199909140	0	-	199900233	199900233	8553170	3	496,132,38,	0,8629,8869,
#Partially deleted in new
chr2	199900371	199909158	chr2:199900371-199909158	0	-	199900371	199900371	8553170	3	358,98,56,	0,8525,8731,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	199901080	199901377	chr2:199901080-199901377	3	-	199901080	199901080	8553170	1	297,	0,
#Deleted in new
chr2	199908332	199909158	chr2:199908332-199909158	0	-	199908332	199908332	8553170	2	662,56,	0,770,
#Partially deleted in new
chr2	199908862	199911000	chr2:199908862-199911000	1	-	199908862	199908862	8553170	3	132,70,199,	0,240,1939,
#Partially deleted in new
chr2	199908862	199911090	chr2:199908862-199911090	1	-	199908862	199908862	8553170	3	132,70,71,	0,240,2157,
#Partially deleted in new
chr2	199908930	199911091	chr2:199908930-199911091	1	-	199908930	199908930	8553170	3	64,70,49,	0,172,2112,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	199911255	199928273	chr2:199911255-199928273	3	+	199911438	199925886	789624	2	516,3212,	0,13806,
#Partially deleted in new
chr2	199911305	199955935	chr2:199911305-199955935	0	+	199911305	199911305	8553170	2	466,568,	0,44062,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	199929974	199955736	chr2:199929974-199955736	3	-	199933066	199955470	0	8	3349,117,88,138,45,70,155,344,	0,5956,6430,8958,10114,13790,18343,25418,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	199929974	199955736	chr2:199929974-199955736	0	-	199939033	199955470	789624	8	3349,117,88,138,45,70,136,344,	0,5956,6430,8958,10114,13790,18362,25418,
#Partially deleted in new
chr2	199931332	199955500	chr2:199931332-199955500	0	-	199931332	199931332	8553170	7	1991,117,88,138,45,70,108,	0,4598,5072,7600,8756,12432,24060,
#Partially deleted in new
chr2	199931898	199955503	chr2:199931898-199955503	0	-	199939033	199955470	789624	7	1425,117,138,45,70,136,111,	0,4032,7034,8190,11866,16438,23494,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	199942057	199955502	chr2:199942057-199955502	0	-	199942057	199942057	8553170	2	6415,110,	0,13335,
#Partially deleted in new
chr2	199955316	199964108	chr2:199955316-199964108	3	+	199955798	199963811	789624	6	20,752,72,127,148,376,	0,180,3951,4437,6464,8416,
#Partially deleted in new
chr2	199955602	199964125	chr2:199955602-199964125	1	+	199955798	199963811	789624	5	646,72,127,148,393,	0,3665,4151,6178,8130,
#Partially deleted in new
chr2	199959265	199963836	chr2:199959265-199963836	0	+	199959265	199959265	8553170	3	74,127,104,	0,488,4467,
#Partially deleted in new
chr2	200305880	200419333	chr2:200305880-200419333	0	+	200389244	200419333	789624	5	280,61,109,50,84,	0,83342,106430,110498,113369,
#Partially deleted in new
chr2	200305892	200478530	chr2:200305892-200478530	1	+	200389244	200478031	789624	13	400,50,61,109,50,247,207,136,59,110,103,221,895,	0,23538,83330,106418,110486,113357,133229,134756,153876,161397,164021,166939,171743,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	200305985	200482263	chr2:200305985-200482263	3	+	200389244	200478031	789624	13	175,50,61,109,50,247,207,136,59,110,103,221,4628,	0,23445,83237,106325,110393,113264,133136,134663,153783,161304,163928,166846,171650,
#Partially deleted in new
chr2	200306150	200478529	chr2:200306150-200478529	1	+	200389244	200478031	789624	13	451,50,61,109,50,247,207,136,59,110,103,221,894,	0,23280,83072,106160,110228,113099,132971,134498,153618,161139,163763,166681,171485,
#Partially deleted in new
chr2	200306158	200478529	chr2:200306158-200478529	1	+	200416410	200478031	789624	12	134,50,109,50,247,207,136,59,110,103,221,894,	0,23272,106152,110220,113091,132963,134490,153610,161131,163755,166673,171477,
#Partially deleted in new
chr2	200306275	200419397	chr2:200306275-200419397	0	+	200389244	200419397	789624	6	143,50,61,109,50,148,	0,23155,82947,106035,110103,112974,
#Partially deleted in new
chr2	200306282	200412342	chr2:200306282-200412342	0	+	200389244	200412342	789624	5	319,50,143,61,32,	0,23148,65826,82940,106028,
#Partially deleted in new
chr2	200306375	200478102	chr2:200306375-200478102	1	+	200389244	200478031	789624	14	226,204,50,61,109,50,247,207,136,59,110,103,221,467,	0,2511,23055,82847,105935,110003,112874,132746,134273,153393,160914,163538,166456,171260,
#Partially deleted in new
chr2	200306523	200478530	chr2:200306523-200478530	1	+	200389244	200478031	789624	12	78,50,61,109,50,247,136,59,110,103,221,895,	0,22907,82699,105787,109855,112726,134125,153245,160766,163390,166308,171112,
#Partially deleted in new
chr2	200306552	200419470	chr2:200306552-200419470	0	+	200389244	200419470	789624	7	49,50,231,61,109,50,221,	0,22878,71588,82670,105758,109826,112697,
#Partially deleted in new
chr2	200306553	200389283	chr2:200306553-200389283	0	+	200389244	200389283	789624	5	48,50,231,151,61,	0,22877,71587,77313,82669,
#Partially deleted in new
chr2	200306553	200439240	chr2:200306553-200439240	0	+	200389244	200439240	789624	8	48,50,151,61,109,50,247,119,	0,22877,77313,82669,105757,109825,112696,132568,
#Partially deleted in new
chr2	200306553	200390854	chr2:200306553-200390854	0	+	200306553	200306553	8553170	3	48,50,1632,	0,22877,82669,
#Partially deleted in new
chr2	200306567	200440784	chr2:200306567-200440784	0	+	200389244	200440784	789624	6	34,61,109,50,247,136,	0,82655,105743,109811,112682,134081,
#Partially deleted in new
chr2	200306707	200478530	chr2:200306707-200478530	1	+	200389244	200478031	789624	13	215,50,61,109,50,247,207,136,59,110,103,221,895,	0,22723,82515,105603,109671,112542,132414,133941,153061,160582,163206,166124,170928,
#Partially deleted in new
chr2	200306717	200390868	chr2:200306717-200390868	0	+	200306717	200306717	8553170	3	205,50,1646,	0,22713,82505,
#Partially deleted in new
chr2	200306726	200372191	chr2:200306726-200372191	0	+	200306726	200306726	8553170	3	196,50,83,	0,22704,65382,
#Partially deleted in new
chr2	200306871	200469960	chr2:200306871-200469960	0	+	200389244	200469960	789624	10	51,50,61,109,50,247,136,59,110,47,	0,22559,82351,105439,109507,112378,133777,152897,160418,163042,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	200308949	200482256	chr2:200308949-200482256	1	+	200309072	200478031	789624	13	141,50,61,109,50,247,207,136,59,110,103,221,4621,	0,20481,80273,103361,107429,110300,130172,131699,150819,158340,160964,163882,168686,
#Partially deleted in new
chr2	200351188	200478209	chr2:200351188-200478209	1	+	200351288	200478031	789624	12	102,61,109,50,247,207,136,59,110,103,221,574,	0,38034,61122,65190,68061,87933,89460,108580,116101,118725,121643,126447,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	200373174	200373269	chr2:200373174-200373269	3	+	200373174	200373174	8553170	1	95,	0,
#Partially deleted in new
chr2	200378004	200439139	chr2:200378004-200439139	0	+	200389244	200439139	789624	6	115,61,109,50,247,18,	0,11218,34306,38374,41245,61117,
#Partially deleted in new
chr2	200378236	200440724	chr2:200378236-200440724	0	+	200389244	200440724	789624	6	135,61,109,50,247,76,	0,10986,34074,38142,41013,62412,
#Partially deleted in new
chr2	200393076	200467378	chr2:200393076-200467378	0	+	200393249	200467378	789624	7	197,109,50,247,136,59,89,	0,19234,23302,26173,47572,66692,74213,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	200440648	200461337	chr2:200440648-200461337	0	+	200440648	200460995	789624	3	136,59,500,	0,19120,20189,
#Partially deleted in new
chr2	200463252	200473047	chr2:200463252-200473047	0	+	200463252	200463252	8553170	4	118,110,103,216,	0,4037,6661,9579,
#Partially deleted in new
chr2	200469739	200477882	chr2:200469739-200477882	0	+	200469739	200469739	8553170	3	277,221,247,	0,3092,7896,
#Partially deleted in new
chr2	200469913	200478146	chr2:200469913-200478146	0	+	200469913	200469913	8553170	3	103,161,511,	0,2918,7722,
#Partially deleted in new
chr2	200488951	200510063	chr2:200488951-200510063	3	-	200490099	200507016	789624	7	1665,103,95,194,212,235,436,	0,4220,8801,9939,15796,17905,20676,
#Partially deleted in new
chr2	200488957	200510068	chr2:200488957-200510068	1	-	200490099	200507016	789624	7	1659,103,95,194,212,235,58,	0,4214,8795,9933,15790,17899,21053,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	200495869	200510068	chr2:200495869-200510068	0	-	200495869	200495869	8553170	5	1978,194,212,235,58,	0,3021,8878,10987,14141,
#Partially deleted in new
chr2	200499001	200510068	chr2:200499001-200510068	0	-	200499001	200499001	8553170	4	83,190,235,58,	0,5768,7855,11009,
#Partially deleted in new
chr2	200510007	200535124	chr2:200510007-200535124	0	+	200532975	200535124	789624	4	259,117,135,129,	0,16128,22966,24988,
#Partially deleted in new
chr2	200526156	200583782	chr2:200526156-200583782	3	+	200532975	200583464	789624	9	96,135,176,78,86,230,2928,151,334,	0,6817,8839,9908,16422,43506,44893,49154,57292,
#Partially deleted in new
chr2	200526166	200570142	chr2:200526166-200570142	1	+	200532975	200569933	789624	6	86,135,176,78,86,480,	0,6807,8829,9898,16412,43496,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	200531774	200533375	chr2:200531774-200533375	0	+	200531774	200531774	8553170	2	127,402,	0,1199,
#Partially deleted in new
chr2	200535045	200542950	chr2:200535045-200542950	0	+	200535045	200535045	8553170	3	126,78,372,	0,1019,7533,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	200535140	200543622	chr2:200535140-200543622	0	+	200535140	200535140	8553170	4	31,78,86,598,	0,924,7438,7884,
#Partially deleted in new
chr2	200585867	200671495	chr2:200585867-200671495	3	+	200586108	200670679	0	35	286,58,97,109,127,62,90,81,145,93,152,94,110,185,163,93,170,127,123,97,125,134,88,87,192,228,96,129,75,53,115,66,189,168,867,	0,7278,9404,11529,13752,16416,17399,18149,18828,19668,23116,23453,25516,26741,27936,30103,34782,35252,37993,41485,48923,51043,52347,55230,56742,65106,70974,73297,74127,75711,76987,80819,82747,83707,84761,
#Partially deleted in new
chr2	200588173	200603297	chr2:200588173-200603297	0	+	200593175	200603297	789624	7	97,58,97,109,127,62,31,	0,4972,7098,9223,11446,14110,15093,
#Partially deleted in new
chr2	200609208	200613967	chr2:200609208-200613967	0	+	200609208	200609208	8553170	4	206,110,185,164,	0,2175,3400,4595,
#Partially deleted in new
chr2	200609219	200670872	chr2:200609219-200670872	0	+	200609219	200609219	8553170	23	195,185,163,93,170,127,123,97,125,134,88,87,192,228,96,129,75,53,115,66,189,168,244,	0,3389,4584,6751,11430,11900,14641,18133,25571,27691,28995,31878,33390,41754,47622,49945,50775,52359,53635,57467,59395,60355,61409,
#Partially deleted in new
chr2	200609242	200671136	chr2:200609242-200671136	0	+	200609242	200609242	8553170	22	172,185,163,93,127,123,97,125,134,88,87,192,228,96,129,75,53,115,66,189,168,508,	0,3366,4561,6728,11877,14618,18110,25548,27668,28972,31855,33367,41731,47599,49922,50752,52336,53612,57444,59372,60332,61386,
#Partially deleted in new
chr2	200638131	200642803	chr2:200638131-200642803	0	+	200638131	200638131	8553170	3	171,87,194,	0,2966,4478,
#Partially deleted in new
chr2	200660036	200670650	chr2:200660036-200670650	0	+	200660036	200670650	789624	7	33,53,115,66,123,168,22,	0,1542,2818,6650,8644,9538,10592,
#Partially deleted in new
chr2	200662906	200677064	chr2:200662906-200677064	0	+	200662906	200676964	789624	5	63,66,189,168,187,	0,3780,5708,6668,13971,
#Partially deleted in new
chr2	200678232	200732539	chr2:200678232-200732539	7	+	200678232	200678232	16724991	19	400,114,129,69,51,51,138,39,75,75,75,90,213,105,123,88,144,75,53,	0,1082,3130,10445,13639,17387,22585,23177,26546,28111,30627,33125,39084,40210,44745,45867,50324,52798,54254,
#Partially deleted in new
chr2	200695722	200738781	chr2:200695722-200738781	3	+	200695722	200695722	8553170	6	289,123,88,75,53,122,	0,27255,28377,35308,36764,42937,
#Partially deleted in new
chr2	200695733	200700372	chr2:200695733-200700372	4	+	200695733	200695733	16724991	2	278,442,	0,4197,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	200695838	200731315	chr2:200695838-200731315	4	+	200695838	200695838	16724991	4	173,123,88,285,	0,27139,28261,35192,
#Partially deleted in new
chr2	200695916	200748040	chr2:200695916-200748040	0	+	200695916	200695916	8553170	4	95,185,190,93,	0,48307,49805,52031,
#Partially deleted in new
chr2	200712304	200735177	chr2:200712304-200735177	3	-	200712304	200712304	789624	3	1826,83,141,	0,4030,22732,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	200728925	200734109	chr2:200728925-200734109	5	+	200728925	200728925	16724991	4	761,145,53,512,	0,2105,3561,4672,
#Partially deleted in new
chr2	200738607	200791630	chr2:200738607-200791630	7	+	200738607	200738607	16724991	26	204,94,110,185,190,93,170,115,123,98,125,134,88,87,195,289,96,129,75,53,115,66,189,168,33,60,	0,2150,3714,5616,7114,9340,10466,11858,12908,16186,17067,17915,20351,23287,23552,25933,29826,31954,34392,35270,37250,39141,39319,42039,52359,52963,
#Partially deleted in new
chr2	200740820	200755067	chr2:200740820-200755067	4	+	200740820	200740820	16724991	9	31,110,185,190,93,170,115,123,274,	0,1501,3403,4901,7127,8253,9645,10695,13973,
#Partially deleted in new
chr2	200751524	200762215	chr2:200751524-200762215	4	+	200751524	200751524	16724991	5	114,98,88,87,56,	0,3269,7434,10370,10635,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	200762307	200794239	chr2:200762307-200794239	5	+	200762307	200762307	16724991	14	47,112,96,130,129,75,53,115,66,189,168,114,76,103,	0,2410,6126,7512,8254,10692,11570,13550,15441,15619,18339,20017,29275,31829,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	200775583	200775750	chr2:200775583-200775750	3	+	200775583	200775583	8553170	1	167,	0,
#Partially deleted in new
chr2	200780494	200812170	chr2:200780494-200812170	3	-	200780494	200780494	789624	4	295,119,77,386,	0,10912,17004,31290,
#Partially deleted in new
chr2	200810593	200817167	chr2:200810593-200817167	0	+	200813217	200817167	789624	6	104,74,177,95,66,62,	0,2614,4747,5073,5731,6512,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	200811545	200827338	chr2:200811545-200827338	1	+	200813217	200822178	789624	12	445,74,177,95,66,136,110,171,147,139,123,5192,	0,1662,3795,4121,4779,5560,6428,6677,7209,8436,9637,10601,
#Partially deleted in new
chr2	200811545	200818818	chr2:200811545-200818818	0	+	200813217	200818818	789624	9	182,74,177,95,66,136,110,171,64,	0,1662,3795,4121,4779,5560,6428,6677,7209,
#Partially deleted in new
chr2	200811545	200818083	chr2:200811545-200818083	0	+	200813217	200818083	789624	7	401,74,177,95,66,136,110,	0,1662,3795,4121,4779,5560,6428,
#Partially deleted in new
chr2	200811909	200815715	chr2:200811909-200815715	0	+	200811909	200811909	8553170	3	81,74,375,	0,1298,3431,
#Deleted in new
chr2	200811922	200813404	chr2:200811922-200813404	0	+	200811922	200811922	8553170	2	68,197,	0,1285,
#Partially deleted in new
chr2	200812184	200823238	chr2:200812184-200823238	1	+	200812307	200822178	789624	12	125,74,177,95,66,136,110,171,147,139,123,1092,	0,1023,3156,3482,4140,4921,5789,6038,6570,7797,8998,9962,
#Partially deleted in new
chr2	200812355	200822243	chr2:200812355-200822243	3	+	200812407	200822178	789624	12	138,74,177,95,66,136,110,171,147,139,123,97,	0,852,2985,3311,3969,4750,5618,5867,6399,7626,8827,9791,
#Partially deleted in new
chr2	200812675	200815762	chr2:200812675-200815762	0	+	200812883	200815762	789624	4	210,74,177,96,	0,532,2665,2991,
#Partially deleted in new
chr2	200812988	200817188	chr2:200812988-200817188	0	+	200813217	200817188	789624	6	62,74,177,95,66,83,	0,219,2352,2678,3336,4117,
#Partially deleted in new
chr2	200818033	200820195	chr2:200818033-200820195	0	+	200818033	200818033	8553170	4	50,171,147,214,	0,189,721,1948,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	200818271	200819124	chr2:200818271-200819124	0	+	200818271	200818271	8553170	2	122,370,	0,483,
#Partially deleted in new
chr2	200818325	200822550	chr2:200818325-200822550	0	+	200818325	200822178	789624	5	68,147,37,123,404,	0,429,1656,2857,3821,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	200844239	200845461	chr2:200844239-200845461	7	+	200844239	200844239	16724991	1	1222,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	200849037	200849144	chr2:200849037-200849144	7	-	200849037	200849037	16724991	1	107,	0,
#Partially deleted in new
chr2	200853008	200864699	chr2:200853008-200864699	3	-	200853305	200861862	0	13	441,91,80,83,130,95,167,117,67,91,229,161,136,	0,894,1607,1995,3673,3882,4709,4964,6671,7116,8229,8693,11555,
#Partially deleted in new
chr2	200853008	200864744	chr2:200853008-200864744	1	-	200853305	200861862	789624	12	441,91,80,83,130,95,167,117,68,229,161,181,	0,894,1607,1995,3673,3882,4709,4964,6671,8229,8693,11555,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	200853075	200860983	chr2:200853075-200860983	0	-	200853075	200853075	8553170	8	374,91,80,83,130,994,117,1304,	0,827,1540,1928,3606,3815,4897,6604,
#Partially deleted in new
chr2	200853076	200854013	chr2:200853076-200854013	0	-	200853076	200853076	8553170	2	373,111,	0,826,
#Partially deleted in new
chr2	200853080	200864656	chr2:200853080-200864656	0	-	200859725	200861862	0	12	369,91,80,83,130,95,167,117,67,229,161,93,	0,822,1535,1923,3601,3810,4637,4892,6599,8157,8621,11483,
#Partially deleted in new
chr2	200853080	200864691	chr2:200853080-200864691	0	-	200853080	200853080	789624	11	369,91,80,83,130,95,167,117,1787,161,128,	0,822,1535,1923,3601,3810,4637,4892,6599,8621,11483,
#Partially deleted in new
chr2	200853081	200853995	chr2:200853081-200853995	0	-	200853081	200853081	8553170	2	368,93,	0,821,
#Partially deleted in new
chr2	200853097	200858166	chr2:200853097-200858166	1	-	200853305	200858106	789624	8	352,91,80,83,130,95,167,194,	0,805,1518,1906,3584,3793,4620,4875,
#Partially deleted in new
chr2	200853112	200864662	chr2:200853112-200864662	0	-	200854684	200861862	789624	12	337,91,80,130,95,167,117,67,91,229,161,99,	0,790,1503,3569,3778,4605,4860,6567,7012,8125,8589,11451,
#Partially deleted in new
chr2	200853195	200864561	chr2:200853195-200864561	1	-	200853305	200864226	0	13	254,91,80,83,130,95,167,117,67,91,229,161,461,	0,707,1420,1808,3486,3695,4522,4777,6484,6929,8042,8506,10905,
#Partially deleted in new
chr2	200853246	200854134	chr2:200853246-200854134	0	-	200853246	200853246	8553170	2	203,232,	0,656,
#Partially deleted in new
chr2	200853331	200854886	chr2:200853331-200854886	0	-	200853331	200853331	8553170	3	118,91,271,	0,571,1284,
#Partially deleted in new
chr2	200860964	200864657	chr2:200860964-200864657	0	-	200860964	200860964	8553170	2	502,94,	0,3599,
#Partially deleted in new
chr2	200861089	200864252	chr2:200861089-200864252	0	-	200861089	200861089	8553170	3	377,161,152,	0,612,3011,
#Partially deleted in new
chr2	200861331	200864658	chr2:200861331-200864658	0	-	200861331	200861331	8553170	2	531,95,	0,3232,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	200863151	200863247	chr2:200863151-200863247	3	-	200863151	200863151	8553170	1	96,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	200870955	200889154	chr2:200870955-200889154	3	-	200871394	200887615	0	7	566,119,68,94,75,73,199,	0,5963,10465,11386,14742,16657,18000,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	200870955	200889276	chr2:200870955-200889276	0	-	200870955	200870955	8553170	6	566,119,68,75,73,321,	0,5963,10465,14742,16657,18000,
#Partially deleted in new
chr2	200871151	200887687	chr2:200871151-200887687	0	-	200881445	200887615	789624	6	370,119,68,41,75,75,	0,5767,10269,11190,14546,16461,
#Partially deleted in new
chr2	200871212	200889015	chr2:200871212-200889015	0	-	200871394	200889015	789624	6	309,119,68,94,75,60,	0,5706,10208,11129,14485,17743,
#Partially deleted in new
chr2	200871373	200881742	chr2:200871373-200881742	0	-	200871373	200871373	8553170	3	148,119,322,	0,5545,10047,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	200876941	200889066	chr2:200876941-200889066	0	-	200876941	200876941	8553170	8	96,108,68,94,75,69,73,111,	0,555,4479,5400,8756,9972,10671,12014,
#Partially deleted in new
chr2	200876963	200889266	chr2:200876963-200889266	0	-	200876963	200887615	789624	5	74,68,75,73,23,	0,4457,8734,10649,12280,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	200881420	200888579	chr2:200881420-200888579	0	-	200881420	200887615	789624	5	68,94,75,73,286,	0,921,4277,6192,6873,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	200881714	200881821	chr2:200881714-200881821	3	-	200881714	200881714	8553170	1	107,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	200884901	200889046	chr2:200884901-200889046	0	-	200884901	200884901	8553170	4	466,75,73,91,	0,796,2711,4054,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	200885318	200889044	chr2:200885318-200889044	0	-	200885318	200885318	8553170	3	454,73,89,	0,2294,3637,
#Partially deleted in new
chr2	200889326	200895373	chr2:200889326-200895373	0	+	200892024	200895373	789624	4	65,411,163,110,	0,2642,3919,5937,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	200889368	200893297	chr2:200889368-200893297	0	+	200891943	200893297	789624	3	23,644,52,	0,2367,3877,
#Partially deleted in new
chr2	200889384	200903930	chr2:200889384-200903930	3	+	200891943	200903678	789624	7	268,462,163,127,139,84,437,	0,2533,3861,5879,7691,10000,14109,
#Partially deleted in new
chr2	200889387	200903930	chr2:200889387-200903930	1	+	200892024	200903678	789624	7	265,411,163,127,139,84,437,	0,2581,3858,5876,7688,9997,14106,
#Partially deleted in new
chr2	200889414	200903896	chr2:200889414-200903896	1	+	200891943	200903678	789624	8	238,63,462,163,127,139,84,403,	0,1108,2503,3831,5849,7661,9970,14079,
#Partially deleted in new
chr2	200889446	200893378	chr2:200889446-200893378	0	+	200892024	200893378	789624	4	206,63,411,133,	0,1076,2522,3799,
#Partially deleted in new
chr2	200891914	200903923	chr2:200891914-200903923	1	+	200891943	200903744	789624	4	465,163,100,239,	0,1331,3349,11770,
#Partially deleted in new
chr2	200891916	200903925	chr2:200891916-200903925	1	+	200891943	200903541	789624	5	463,163,127,84,432,	0,1329,3347,7468,11577,
#Partially deleted in new
chr2	200897073	200903923	chr2:200897073-200903923	0	+	200897073	200903698	789624	3	141,84,254,	0,2311,6596,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	200899019	200899121	chr2:200899019-200899121	3	+	200899019	200899019	8553170	1	102,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr2	200908972	200963680	chr2:200908972-200963680	3	-	200911300	200958123	0	18	2415,119,62,172,147,97,133,110,99,194,61,32,93,90,144,104,49,191,	0,4322,4958,11249,12020,16863,17795,22366,24903,26726,28933,32275,33712,40581,48428,49057,50419,54517,
#Partially deleted in new
chr2	200910453	200926904	chr2:200910453-200926904	0	-	200910453	200910453	8553170	6	934,698,172,147,97,137,	0,2841,9768,10539,15382,16314,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	200920220	200921738	chr2:200920220-200921738	0	-	200920220	200920220	8553170	2	173,746,	0,772,
#Partially deleted in new
chr2	200933875	200943159	chr2:200933875-200943159	0	-	200933875	200933875	8553170	6	99,194,61,32,93,72,	0,1823,4030,7372,8809,9212,
#Partially deleted in new
chr2	200942683	200963680	chr2:200942683-200963680	0	-	200942683	200942683	8553170	5	94,90,144,49,191,	0,6870,14717,16708,20806,
#Partially deleted in new
chr2	200949553	200963377	chr2:200949553-200963377	0	-	200949553	200958123	789624	5	90,144,104,49,159,	0,7847,8476,9838,13665,
#Partially deleted in new
chr2	200957421	200963258	chr2:200957421-200963258	0	-	200957421	200958123	789624	4	123,104,49,210,	0,608,1970,5627,
#Partially deleted in new
chr2	200963262	201009102	chr2:200963262-201009102	0	+	200963262	200963262	8553170	2	368,117,	0,45723,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	200963298	200978982	chr2:200963298-200978982	3	+	200963298	200963298	8553170	2	332,488,	0,15196,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	200973717	201071669	chr2:200973717-201071669	3	-	200981269	201024009	789624	12	8154,160,88,117,96,116,81,180,102,81,98,60,	0,14544,18563,19169,23727,35255,37674,43273,49113,50241,71778,97892,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	200978492	201071665	chr2:200978492-201071665	0	-	201017076	201024009	789624	14	3379,168,160,88,117,96,116,81,180,56,102,81,98,56,	0,8872,9769,13788,14394,18952,30480,32899,38498,43566,44338,45466,67003,93117,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	200996049	201009452	chr2:200996049-201009452	0	-	200996049	200996049	8553170	2	1491,480,	0,12923,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	200996049	201071669	chr2:200996049-201071669	0	-	200996049	200996049	8553170	8	1491,116,81,180,102,81,98,60,	0,12923,15342,20941,26781,27909,49446,75560,
#Partially deleted in new
chr2	200997444	201071645	chr2:200997444-201071645	0	-	200997444	201024009	789624	7	96,116,81,180,102,81,36,	0,11528,13947,19546,25386,26514,74165,
#Deleted in new
chr2	201021447	201022884	chr2:201021447-201022884	0	-	201021447	201021447	8553170	3	428,56,54,	0,611,1383,
#Partially deleted in new
chr2	201022480	201071628	chr2:201022480-201071628	0	-	201022480	201022480	8553170	4	452,81,98,140,	0,1478,23015,49008,
#Partially deleted in new
chr2	201022545	201071671	chr2:201022545-201071671	0	-	201022545	201022545	8553170	3	387,81,62,	0,1413,49064,
#Partially deleted in new
chr2	201023615	201045557	chr2:201023615-201045557	0	-	201023615	201023615	8553170	2	424,62,	0,21880,
#Deleted in new
chr2	201063088	201064051	chr2:201063088-201064051	7	+	201063088	201063088	16724991	1	963,	0,
#Deleted in new
chr2	201066690	201067191	chr2:201066690-201067191	7	+	201066690	201066690	16724991	1	501,	0,
#Partially deleted in new
chr2	201071432	201085513	chr2:201071432-201085513	0	+	201078882	201085513	789624	3	265,142,55,	0,7448,14026,
#Partially deleted in new
chr2	201071738	201085750	chr2:201071738-201085750	3	+	201078882	201085615	0	3	321,142,292,	0,7142,13720,
#Partially deleted in new
chr2	201072007	201085744	chr2:201072007-201085744	1	+	201078882	201085615	0	4	52,23,142,286,	0,331,6873,13451,
#Partially deleted in new
chr2	201072029	201085750	chr2:201072029-201085750	1	+	201078882	201085615	0	4	30,83,142,292,	0,249,6851,13429,
#Partially deleted in new
chr2	201079841	201079944	chr2:201079841-201079944	3	+	201079841	201079841	8553170	1	103,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	201097743	201098091	chr2:201097743-201098091	3	+	201097743	201097743	8553170	1	348,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	201101381	201103136	chr2:201101381-201103136	3	+	201101381	201101381	8553170	2	504,765,	0,990,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	201102088	201102957	chr2:201102088-201102957	7	-	201102088	201102088	16724991	2	109,446,	0,423,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	201116103	201176687	chr2:201116103-201176687	3	+	201129865	201163973	0	10	378,418,106,136,83,55,50,82,511,12853,	0,13625,16925,19868,24253,29274,32899,33650,44328,47731,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	201116153	201164162	chr2:201116153-201164162	1	+	201133035	201163973	0	9	328,106,136,83,55,50,82,511,328,	0,16875,19818,24203,29224,32849,33600,44278,47681,
#Partially deleted in new
chr2	201116166	201141598	chr2:201116166-201141598	1	+	201129865	201141433	0	6	315,418,106,136,83,225,	0,13562,16862,19805,24190,25207,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	201116206	201164279	chr2:201116206-201164279	1	+	201129865	201163973	0	8	275,418,106,136,83,82,511,445,	0,13522,16822,19765,24150,33547,44225,47628,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	201116238	201154576	chr2:201116238-201154576	1	+	201129865	201154222	0	9	243,418,106,136,83,55,50,82,440,	0,13490,16790,19733,24118,29139,32764,33515,37898,
#Duplicated in new
chr2	201116406	201139877	chr2:201116406-201139877	1	+	201129865	201136427	789624	5	75,418,106,136,3680,	0,13322,16622,19565,19791,
#Partially deleted in new
chr2	201116836	201133134	chr2:201116836-201133134	0	+	201129865	201133134	789624	3	131,418,106,	0,12892,16192,
#Partially deleted in new
chr2	201117038	201130059	chr2:201117038-201130059	0	+	201129865	201130059	789624	2	104,331,	0,12690,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	201118490	201164110	chr2:201118490-201164110	1	+	201129865	201163973	0	10	411,418,106,136,83,55,50,82,511,276,	0,11238,14538,17481,21866,26887,30512,31263,41941,45344,
#Deleted in new
chr2	201118522	201119177	chr2:201118522-201119177	0	+	201118522	201118522	789624	2	379,150,	0,505,
#Partially deleted in new
chr2	201122476	201130053	chr2:201122476-201130053	0	+	201129865	201130053	789624	2	271,325,	0,7252,
#Partially deleted in new
chr2	201129328	201133102	chr2:201129328-201133102	0	+	201129865	201133102	789624	3	192,418,74,	0,400,3700,
#Partially deleted in new
chr2	201129502	201141602	chr2:201129502-201141602	1	+	201129865	201141433	0	5	644,106,136,83,229,	0,3526,6469,10854,11871,
#Partially deleted in new
chr2	201129642	201136281	chr2:201129642-201136281	0	+	201129642	201129642	8553170	4	504,106,136,84,	0,3386,6329,6555,
#Partially deleted in new
chr2	201129865	201163559	chr2:201129865-201163559	1	+	201129865	201163080	0	9	281,106,136,83,55,50,82,511,564,	0,3163,6106,10491,15512,19137,19888,30566,33130,
#Partially deleted in new
chr2	201129976	201140661	chr2:201129976-201140661	0	+	201129976	201129976	8553170	4	170,106,136,305,	0,3052,5995,10380,
#Partially deleted in new
chr2	201132778	201140735	chr2:201132778-201140735	1	+	201133035	201140475	789624	4	72,106,136,379,	0,250,3193,7578,
#Partially deleted in new
chr2	201132871	201141407	chr2:201132871-201141407	0	+	201133035	201141407	789624	4	263,136,83,34,	0,3100,7485,8502,
#Partially deleted in new
chr2	201132952	201149835	chr2:201132952-201149835	0	+	201133035	201149835	789624	6	182,136,83,55,50,82,	0,3019,7404,12425,16050,16801,
#Partially deleted in new
chr2	201132983	201163157	chr2:201132983-201163157	1	+	201133035	201163080	0	8	151,136,83,55,50,82,511,162,	0,2988,7373,12394,16019,16770,27448,30012,
#Partially deleted in new
chr2	201133029	201136414	chr2:201133029-201136414	0	+	201133029	201133029	8553170	2	105,443,	0,2942,
#Partially deleted in new
chr2	201133035	201160943	chr2:201133035-201160943	1	+	201133035	201160943	789624	6	99,136,83,51,82,512,	0,2936,7321,15966,16718,27396,
#Duplicated in new
chr2	201137515	201140027	chr2:201137515-201140027	7	-	201137515	201137515	16724991	2	1488,54,	0,2458,
#Partially deleted in new
chr2	201140185	201163973	chr2:201140185-201163973	0	+	201140185	201140185	8553170	6	254,55,50,82,511,139,	0,5192,8817,9568,20246,23649,
#Partially deleted in new
chr2	201140277	201151160	chr2:201140277-201151160	0	-	201140277	201140277	8553170	6	168,138,76,113,107,63,	0,8456,8847,9053,9376,10820,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	201140281	201151160	chr2:201140281-201151160	0	-	201140281	201140281	8553170	6	164,122,138,76,107,63,	0,7461,8452,8843,9372,10816,
#Partially deleted in new
chr2	201140283	201144196	chr2:201140283-201144196	1	-	201140283	201140283	8553170	2	162,61,	0,3852,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	201140283	201151160	chr2:201140283-201151160	0	-	201140283	201140283	8553170	7	162,167,138,76,107,119,63,	0,3852,8450,8841,9370,10087,10814,
#Partially deleted in new
chr2	201140283	201151160	chr2:201140283-201151160	0	-	201140283	201140283	8553170	6	162,51,138,76,107,63,	0,5356,8450,8841,9370,10814,
#Partially deleted in new
chr2	201140283	201151160	chr2:201140283-201151160	0	-	201140283	201140283	8553170	5	162,167,138,107,63,	0,3852,8450,9370,10814,
#Partially deleted in new
chr2	201140286	201151160	chr2:201140286-201151160	0	-	201140286	201140286	8553170	7	159,167,138,76,113,107,63,	0,3849,8447,8838,9044,9367,10811,
#Partially deleted in new
chr2	201140288	201157823	chr2:201140288-201157823	3	-	201140288	201140288	789624	7	157,138,76,107,162,363,69,	0,8445,8836,9365,10809,13022,17466,
#Partially deleted in new
chr2	201140288	201149671	chr2:201140288-201149671	0	-	201140288	201140288	8553170	3	157,76,18,	0,8836,9365,
#Partially deleted in new
chr2	201140289	201149671	chr2:201140289-201149671	0	-	201140289	201140289	8553170	3	156,485,18,	0,8426,9364,
#Partially deleted in new
chr2	201140295	201151160	chr2:201140295-201151160	0	-	201140295	201140295	8553170	6	150,167,138,76,107,63,	0,3840,8438,8829,9358,10802,
#Partially deleted in new
chr2	201140306	201149671	chr2:201140306-201149671	0	-	201140306	201140306	8553170	6	139,160,117,138,76,18,	0,3829,5267,8427,8818,9347,
#Partially deleted in new
chr2	201140307	201149671	chr2:201140307-201149671	0	-	201140307	201140307	8553170	3	138,467,18,	0,8426,9346,
#Partially deleted in new
chr2	201140327	201151160	chr2:201140327-201151160	0	-	201140327	201140327	8553170	7	118,117,138,76,113,107,63,	0,5246,8406,8797,9003,9326,10770,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	201140370	201151160	chr2:201140370-201151160	0	-	201140370	201140370	8553170	8	75,167,117,138,76,107,119,63,	0,3765,5203,8363,8754,9283,10000,10727,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	201141903	201141966	chr2:201141903-201141966	3	+	201141903	201141903	8553170	1	63,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	201146294	201149671	chr2:201146294-201149671	0	-	201146294	201146294	8553170	3	448,76,18,	0,2830,3359,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	201146409	201151160	chr2:201146409-201151160	0	-	201146409	201146409	8553170	5	333,138,76,107,63,	0,2324,2715,3244,4688,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	201148266	201149671	chr2:201148266-201149671	0	-	201148266	201148266	8553170	3	605,76,18,	0,858,1387,
#Partially deleted in new
chr2	201148873	201151160	chr2:201148873-201151160	0	-	201148873	201148873	8553170	3	570,107,63,	0,780,2224,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	201148950	201150355	chr2:201148950-201150355	0	+	201148950	201148950	8553170	2	102,602,	0,803,
#Partially deleted in new
chr2	201149465	201151160	chr2:201149465-201151160	0	-	201149465	201149465	8553170	2	295,63,	0,1632,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	201149855	201151160	chr2:201149855-201151160	0	-	201149855	201149855	8553170	2	634,63,	0,1242,
#Partially deleted in new
chr2	201151160	201153618	chr2:201151160-201153618	0	-	201151160	201151160	8553170	2	99,797,	0,1661,
#Deleted in new
chr2	201162483	201162680	chr2:201162483-201162680	7	-	201162483	201162483	16724991	1	197,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	201166964	201167546	chr2:201166964-201167546	3	+	201166964	201166964	8553170	2	308,137,	0,445,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	201182880	201221665	chr2:201182880-201221665	3	+	201185777	201217741	789624	10	428,354,94,136,107,37,92,109,493,4078,	0,2890,4825,10103,12961,20849,23001,25194,26189,34707,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	201182897	201221660	chr2:201182897-201221660	1	+	201185777	201208175	789624	9	411,354,94,136,107,37,109,493,4073,	0,2873,4808,10086,12944,20832,25177,26172,34690,
#Partially deleted in new
chr2	201183111	201206250	chr2:201183111-201206250	0	+	201183111	201183111	8553170	7	197,354,94,136,107,37,369,	0,2659,4594,9872,12730,20618,22770,
#Partially deleted in new
chr2	201183131	201229406	chr2:201183131-201229406	1	+	201185777	201229083	789624	10	177,354,94,136,107,37,92,109,493,474,	0,2639,4574,9852,12710,20598,22750,24943,25938,45801,
#Partially deleted in new
chr2	201183140	201208160	chr2:201183140-201208160	0	+	201185777	201192993	789624	6	168,354,136,107,37,86,	0,2630,9843,12701,20589,24934,
#Partially deleted in new
chr2	201183159	201200728	chr2:201183159-201200728	1	+	201185777	201200502	789624	6	149,354,94,136,107,286,	0,2611,4546,9824,12682,17283,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	201183168	201220080	chr2:201183168-201220080	1	+	201185777	201217741	789624	8	140,354,94,136,107,109,493,2493,	0,2602,4537,9815,12673,24906,25901,34419,
#Partially deleted in new
chr2	201183191	201217770	chr2:201183191-201217770	1	+	201185777	201217741	789624	8	117,354,94,136,107,37,493,183,	0,2579,4514,9792,12650,20538,25878,34396,
#Partially deleted in new
chr2	201183194	201229128	chr2:201183194-201229128	1	+	201185777	201229083	789624	8	114,354,94,136,107,109,493,196,	0,2576,4511,9789,12647,24880,25875,45738,
#Partially deleted in new
chr2	201183215	201186380	chr2:201183215-201186380	0	+	201183215	201183215	8553170	2	93,610,	0,2555,
#Partially deleted in new
chr2	201185777	201217741	chr2:201185777-201217741	0	+	201185777	201185777	8553170	8	347,94,136,107,37,109,493,154,	0,1928,7206,10064,17952,22297,23292,31810,
#Partially deleted in new
chr2	201187679	201196015	chr2:201187679-201196015	0	+	201187679	201187679	8553170	3	120,136,174,	0,5304,8162,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	201187745	201193403	chr2:201187745-201193403	0	+	201187745	201187745	8553170	2	54,420,	0,5238,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	201212282	201213081	chr2:201212282-201213081	7	-	201212282	201212282	16724991	1	799,	0,
#Partially deleted in new
chr2	201213297	201214660	chr2:201213297-201214660	7	-	201213297	201213297	16724991	1	1363,	0,
#Partially deleted in new
chr2	201214652	201214950	chr2:201214652-201214950	7	-	201214652	201214652	16724991	1	298,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	201233442	201287711	chr2:201233442-201287711	1	+	201266486	201286594	0	7	112,97,331,106,139,502,1253,	0,573,33018,38073,39195,51373,53016,
#Partially deleted in new
chr2	201233442	201286594	chr2:201233442-201286594	0	+	201266486	201286591	0	9	112,97,331,106,139,65,142,502,136,	0,573,33018,38073,39195,41446,43384,51373,53016,
#Partially deleted in new
chr2	201233462	201286594	chr2:201233462-201286594	3	+	201266486	201286594	0	10	92,97,305,106,139,45,65,142,502,136,	0,553,33024,38053,39175,39435,41426,43364,51353,52996,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	201233464	201242925	chr2:201233464-201242925	0	+	201233464	201233464	8553170	3	158,97,2656,	0,551,6805,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	201233465	201286729	chr2:201233465-201286729	1	+	201266486	201286594	0	10	157,97,331,96,106,139,65,142,502,271,	0,550,32995,36044,38050,39172,41423,43361,51350,52993,
#Partially deleted in new
chr2	201233469	201272919	chr2:201233469-201272919	0	+	201233469	201233469	8553170	5	153,97,331,106,282,	0,546,32991,38046,39168,
#Partially deleted in new
chr2	201233485	201276968	chr2:201233485-201276968	0	+	201271519	201276968	789624	6	137,97,106,139,65,142,	0,530,38030,39152,41403,43341,
#Partially deleted in new
chr2	201233501	201271584	chr2:201233501-201271584	0	+	201266486	201271584	789624	4	121,97,305,69,	0,514,32985,38014,
#Partially deleted in new
chr2	201233505	201281915	chr2:201233505-201281915	1	+	201266486	201276939	0	8	117,97,331,106,139,45,142,83,	0,510,32955,38010,39132,39392,43321,48327,
#Partially deleted in new
chr2	201257979	201276904	chr2:201257979-201276904	0	+	201266486	201276904	789624	5	53,331,106,139,78,	0,8481,13536,14658,18847,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	201258035	201287711	chr2:201258035-201287711	1	+	201258231	201286594	0	9	347,331,106,139,45,65,142,502,1253,	0,8425,13480,14602,14862,16853,18791,26780,28423,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	201258090	201278161	chr2:201258090-201278161	1	+	201266486	201277805	789624	7	64,331,106,139,65,143,435,	0,8370,13425,14547,16798,18736,19636,
#Partially deleted in new
chr2	201258117	201272942	chr2:201258117-201272942	0	+	201266486	201272942	789624	5	37,331,106,139,45,	0,8343,13398,14520,14780,
#Partially deleted in new
chr2	201258117	201272738	chr2:201258117-201272738	0	+	201258231	201266512	789624	4	265,305,106,101,	0,8369,13398,14520,
#Partially deleted in new
chr2	201258118	201272725	chr2:201258118-201272725	0	+	201258118	201258118	8553170	3	36,106,88,	0,13397,14519,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	201258323	201286656	chr2:201258323-201286656	0	+	201258323	201258323	8553170	9	59,331,106,139,45,65,278,502,198,	0,8137,13192,14314,14574,16565,18503,26492,28135,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	201260499	201287709	chr2:201260499-201287709	1	+	201266486	201286594	0	8	114,331,106,139,65,142,502,1251,	0,5961,11016,12138,14389,16327,24316,25959,
#Partially deleted in new
chr2	201261955	201271559	chr2:201261955-201271559	0	+	201266486	201271559	789624	3	342,331,44,	0,4505,9560,
#Partially deleted in new
chr2	201272637	201281859	chr2:201272637-201281859	0	+	201272637	201276939	789624	3	139,142,27,	0,4189,9195,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	201272637	201287092	chr2:201272637-201287092	0	+	201272637	201286594	789624	3	139,502,634,	0,12178,13821,
#Partially deleted in new
chr2	201288270	201351451	chr2:201288270-201351451	1	-	201288654	201351404	789624	14	511,110,159,63,104,100,53,98,62,94,134,49,72,160,	0,1186,1425,10967,19248,20880,42199,42465,54099,55899,58271,59983,62440,63021,
#Partially deleted in new
chr2	201288355	201309249	chr2:201288355-201309249	0	-	201288763	201309249	789624	5	426,90,63,104,99,	0,1340,10882,19163,20795,
#Partially deleted in new
chr2	201288423	201357378	chr2:201288423-201357378	3	-	201288654	201351404	789624	15	358,110,159,63,104,100,53,98,62,94,134,49,72,160,397,	0,1033,1272,10814,19095,20727,42046,42312,53946,55746,58118,59830,62287,62868,68558,
#Partially deleted in new
chr2	201288424	201357378	chr2:201288424-201357378	1	-	201288654	201351404	789624	15	357,110,90,63,104,100,53,98,62,94,134,49,72,160,397,	0,1032,1271,10813,19094,20726,42045,42311,53945,55745,58117,59829,62286,62867,68557,
#Partially deleted in new
chr2	201288424	201357344	chr2:201288424-201357344	0	-	201288424	201288424	789624	14	357,110,164,63,104,100,53,98,94,134,203,72,160,363,	0,1032,1271,10813,19094,20726,42045,42311,55745,58117,59675,62286,62867,68557,
#Partially deleted in new
chr2	201288429	201357398	chr2:201288429-201357398	1	-	201288654	201351404	789624	15	352,110,90,63,104,100,53,98,62,94,134,49,72,160,85,	0,1027,1266,10808,19089,20721,42040,42306,53940,55740,58112,59824,62281,62862,68884,
#Deleted in new
chr2	201288550	201289722	chr2:201288550-201289722	0	-	201288550	201288550	8553170	3	231,136,27,	0,880,1145,
#Partially deleted in new
chr2	201309153	201348301	chr2:201309153-201348301	0	-	201309153	201348301	789624	5	97,53,98,134,48,	0,21316,21582,37388,39100,
#Partially deleted in new
chr2	201309153	201351451	chr2:201309153-201351451	0	-	201309153	201309153	8553170	8	97,53,62,94,134,49,72,160,	0,21316,33216,35016,37388,39100,41557,42138,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	201350748	201352082	chr2:201350748-201352082	0	-	201350748	201351404	789624	3	34,160,264,	0,543,1070,
#Partially deleted in new
chr2	201377206	201451579	chr2:201377206-201451579	3	-	201380542	201420507	789624	16	4012,106,267,299,204,80,138,75,131,79,210,117,77,195,290,230,	0,6904,9011,10496,12093,12594,15702,17591,18107,20295,20938,22170,23811,30196,43210,74143,
#Partially deleted in new
chr2	201387857	201478113	chr2:201387857-201478113	0	+	201388047	201478113	789624	6	218,122,109,124,172,27,	0,85097,86789,87761,89761,90229,
#Partially deleted in new
chr2	201395127	201451500	chr2:201395127-201451500	1	-	201395277	201420507	789624	8	317,79,210,117,77,195,290,151,	0,2374,3017,4249,5890,12275,25289,56222,
#Deleted in new
chr2	201397605	201399510	chr2:201397605-201399510	0	-	201397605	201397605	8553170	2	749,134,	0,1771,
#Deleted in new
chr2	201410543	201413308	chr2:201410543-201413308	7	-	201410543	201410543	16724991	1	2765,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	201419196	201451453	chr2:201419196-201451453	0	-	201419196	201419196	8553170	3	252,290,104,	0,1220,32153,
#Partially deleted in new
chr2	201420416	201433554	chr2:201420416-201433554	0	-	201420416	201420507	789624	2	290,91,	0,13047,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	201423512	201423604	chr2:201423512-201423604	3	+	201423512	201423512	8553170	1	92,	0,
#Partially deleted in new
chr2	201451668	201480846	chr2:201451668-201480846	3	+	201454840	201480175	789624	12	270,107,81,100,122,109,124,172,105,245,43,815,	0,3077,7115,18284,21286,22978,23950,25950,26418,26688,27820,28363,
#Partially deleted in new
chr2	201451733	201474707	chr2:201451733-201474707	0	+	201454840	201472975	789624	5	205,107,81,122,61,	0,3012,7050,21221,22913,
#Partially deleted in new
chr2	201451733	201458823	chr2:201451733-201458823	0	+	201451733	201451733	8553170	4	205,107,72,40,	0,3012,5645,7050,
#Partially deleted in new
chr2	201451795	201480846	chr2:201451795-201480846	1	+	201454840	201480028	789624	12	143,107,81,100,122,109,124,172,105,245,43,839,	0,2950,6988,18157,21159,22851,23823,25823,26291,26561,27693,28212,
#Partially deleted in new
chr2	201472856	201477725	chr2:201472856-201477725	0	+	201472856	201472856	8553170	4	220,109,124,107,	0,1790,2762,4762,
#Partially deleted in new
chr2	201474621	201478191	chr2:201474621-201478191	0	+	201474621	201474621	8553170	4	134,124,172,105,	0,997,2997,3465,
#Partially deleted in new
chr2	201475670	201478567	chr2:201475670-201478567	0	+	201475670	201475670	8553170	3	72,172,481,	0,1948,2416,
#Partially deleted in new
chr2	201478149	201480523	chr2:201478149-201480523	0	+	201478149	201480175	789624	4	42,39,43,492,	0,413,1339,1882,
#Deleted in new
chr2	201479141	201480348	chr2:201479141-201480348	0	+	201479141	201479141	8553170	2	390,317,	0,890,
#Partially deleted in new
chr2	201487424	201619175	chr2:201487424-201619175	3	-	201487611	201619130	789624	15	478,75,300,44,79,106,144,80,69,45,123,146,52,87,276,	0,8470,48596,50011,58118,60080,78304,84516,86784,87857,94670,114314,115799,117186,131475,
#Partially deleted in new
chr2	201487524	201619154	chr2:201487524-201619154	1	-	201495943	201619130	789624	13	378,75,79,106,144,80,69,45,123,146,52,87,255,	0,8370,58018,59980,78204,84416,86684,87757,94570,114214,115699,117086,131375,
#Partially deleted in new
chr2	201487607	201619175	chr2:201487607-201619175	1	-	201487611	201619130	789624	16	295,3591,75,300,44,79,106,144,80,69,45,123,146,52,87,276,	0,3561,8287,48413,49828,57935,59897,78121,84333,86601,87674,94487,114131,115616,117003,131292,
#Partially deleted in new
chr2	201487800	201511827	chr2:201487800-201511827	0	-	201487800	201487800	8553170	2	102,100,	0,23927,
#Partially deleted in new
chr2	201535003	201619178	chr2:201535003-201619178	1	-	201535873	201619130	789624	13	1317,44,79,106,144,80,69,45,123,146,52,87,279,	0,2432,10539,12501,30725,36937,39205,40278,47091,66735,68220,69607,83896,
#Deleted in new
chr2	201549630	201550307	chr2:201549630-201550307	7	+	201549630	201549630	16724991	1	677,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	201550523	201551049	chr2:201550523-201551049	7	+	201550523	201550523	16724991	1	526,	0,
#Partially deleted in new
chr2	201552858	201553612	chr2:201552858-201553612	7	+	201552858	201552858	16724991	1	754,	0,
#Partially deleted in new
chr2	201553687	201554031	chr2:201553687-201554031	7	+	201553687	201553687	16724991	1	344,	0,
#Partially deleted in new
chr2	201554095	201554390	chr2:201554095-201554390	7	+	201554095	201554095	16724991	1	295,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	201554383	201556051	chr2:201554383-201556051	7	+	201554383	201554383	16724991	2	845,527,	0,1141,
#Partially deleted in new
chr2	201556891	201558265	chr2:201556891-201558265	7	+	201556891	201556891	16724991	1	1374,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	201620183	201642944	chr2:201620183-201642944	1	-	201624254	201642626	789624	13	4139,122,94,74,192,124,158,121,138,57,5,32,336,	0,5842,7137,7892,9046,9545,11867,13127,16564,18805,20077,20709,22425,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	201620183	201643517	chr2:201620183-201643517	3	-	201624254	201643400	789624	13	4139,122,94,74,192,124,158,121,138,57,5,32,159,	0,5842,7137,7892,9046,9545,11867,13127,16564,18805,20077,20709,23175,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	201620185	201626323	chr2:201620185-201626323	0	-	201620185	201620185	8553170	2	4137,298,	0,5840,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	201621645	201623430	chr2:201621645-201623430	7	-	201621645	201621645	16724991	1	1785,	0,
#Partially deleted in new
chr2	201623699	201642692	chr2:201623699-201642692	1	-	201624254	201642626	789624	12	623,122,94,74,192,124,158,121,138,62,32,84,	0,2326,3621,4376,5530,6029,8351,9611,13048,15289,17193,18909,
#Partially deleted in new
chr2	201623755	201643484	chr2:201623755-201643484	0	-	201632167	201639045	789624	12	567,122,94,74,192,124,158,121,138,57,32,126,	0,2270,3565,4320,5474,5973,8295,9555,12992,15233,17137,19603,
#Partially deleted in new
chr2	201623881	201629420	chr2:201623881-201629420	0	-	201623881	201623881	8553170	4	441,122,74,191,	0,2144,4194,5348,
#Partially deleted in new
chr2	201627359	201633403	chr2:201627359-201633403	0	-	201627359	201627359	8553170	6	79,74,192,124,158,93,	0,716,1870,2369,4691,5951,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	201627386	201631375	chr2:201627386-201631375	0	-	201627386	201627386	8553170	5	28,74,192,124,421,	0,689,1843,2342,3568,
#Partially deleted in new
chr2	201629287	201643570	chr2:201629287-201643570	0	-	201634876	201643400	789624	10	134,124,158,121,90,138,57,5,32,212,	0,441,2763,4023,5516,7460,9701,10973,11605,14071,
#Partially deleted in new
chr2	201629729	201643402	chr2:201629729-201643402	0	-	201634876	201643400	789624	10	123,158,121,11,90,138,57,5,32,44,	0,2321,3581,4657,5074,7018,9259,10531,11163,13629,
#Partially deleted in new
chr2	201632148	201643418	chr2:201632148-201643418	0	-	201632148	201632148	8553170	7	60,121,90,138,57,32,60,	0,1162,2655,4599,6840,8744,11210,
#Partially deleted in new
chr2	201636169	201639031	chr2:201636169-201639031	0	-	201636169	201636169	8553170	2	716,43,	0,2819,
#Partially deleted in new
chr2	201638450	201642653	chr2:201638450-201642653	0	-	201638450	201638450	8553170	4	595,5,32,45,	0,1810,2442,4158,
#Partially deleted in new
chr2	201644869	201698694	chr2:201644869-201698694	1	-	201645209	201693954	789624	18	535,135,109,94,81,171,42,65,158,72,86,82,132,81,78,122,179,108,	0,2821,4706,5202,9967,11328,13607,30337,35968,36626,37961,40194,41049,42421,45332,48038,49006,53717,
#Partially deleted in new
chr2	201644869	201698694	chr2:201644869-201698694	3	-	201645209	201693954	789624	22	535,135,109,94,81,171,42,15,21,39,18,65,197,72,86,82,132,81,78,122,179,108,	0,2821,4706,5202,9967,11328,13607,15462,19211,21464,24863,30337,35968,36626,37961,40194,41049,42421,45332,48038,49006,53717,
#Partially deleted in new
chr2	201644874	201698694	chr2:201644874-201698694	1	-	201645209	201693954	789624	21	530,135,109,94,81,171,42,15,39,18,65,197,72,86,82,132,81,78,122,179,108,	0,2816,4701,5197,9962,11323,13602,15457,21459,24858,30332,35963,36621,37956,40189,41044,42416,45327,48033,49001,53712,
#Partially deleted in new
chr2	201644874	201698057	chr2:201644874-201698057	1	-	201645209	201693954	789624	17	530,135,109,94,81,171,42,65,197,72,86,82,81,78,122,179,126,	0,2816,4701,5197,9962,11323,13602,30332,35963,36621,37956,40189,42416,45327,48033,49001,53057,
#Partially deleted in new
chr2	201644874	201698694	chr2:201644874-201698694	1	-	201645209	201693954	789624	18	530,135,109,94,81,171,42,65,197,72,86,82,132,81,78,122,179,108,	0,2816,4701,5197,9962,11323,13602,30332,35963,36621,37956,40189,41044,42416,45327,48033,49001,53712,
#Partially deleted in new
chr2	201644896	201697996	chr2:201644896-201697996	1	-	201645209	201693954	789624	19	508,135,109,94,81,171,42,21,65,197,72,86,82,132,81,78,122,179,65,	0,2794,4679,5175,9940,11301,13580,19184,30310,35941,36599,37934,40167,41022,42394,45305,48011,48979,53035,
#Partially deleted in new
chr2	201645104	201698068	chr2:201645104-201698068	1	-	201645209	201693954	789624	17	300,135,109,94,81,171,42,65,197,72,86,82,132,78,122,179,137,	0,2586,4471,4967,9732,11093,13372,30102,35733,36391,37726,39959,40814,45097,47803,48771,52827,
#Partially deleted in new
chr2	201645155	201694057	chr2:201645155-201694057	1	-	201645209	201693954	789624	20	249,135,109,94,81,171,42,15,39,18,65,197,72,86,82,132,81,78,122,182,	0,2535,4420,4916,9681,11042,13321,15176,21178,24577,30051,35682,36340,37675,39908,40763,42135,45046,47752,48720,
#Deleted in new
chr2	201646715	201646820	chr2:201646715-201646820	3	+	201646715	201646715	8553170	1	105,	0,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr2	201654836	201698669	chr2:201654836-201698669	0	-	201664274	201698608	789624	21	81,171,42,15,21,126,39,125,18,28,65,197,72,86,82,132,81,78,122,96,83,	0,1361,3640,5495,9244,9374,11497,11760,14896,18692,20370,26001,26659,27994,30227,31082,32454,35365,38071,39039,43750,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	201665063	201698683	chr2:201665063-201698683	0	-	201665063	201665063	8553170	10	1309,197,72,86,82,81,78,122,96,97,	0,15774,16432,17767,20000,22227,25138,27844,28812,33523,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	201680064	201698631	chr2:201680064-201698631	0	-	201680064	201680064	8553170	9	970,72,86,82,81,78,122,179,45,	0,1431,2766,4999,7226,10137,12843,13811,18522,
#Partially deleted in new
chr2	201685934	201698633	chr2:201685934-201698633	0	-	201685934	201698608	789624	6	116,81,78,122,96,47,	0,1356,4267,6973,7941,12652,
#Partially deleted in new
chr2	201700553	201781189	chr2:201700553-201781189	3	-	201701850	201768885	789624	34	1336,97,150,62,46,177,123,158,118,168,134,78,112,165,99,66,203,67,71,129,132,163,66,181,172,183,78,97,169,358,938,155,80,313,	0,3568,3900,4585,4862,6292,7315,9327,10437,15118,17523,22489,22776,23741,24802,25930,26110,26658,27151,27958,28498,32722,38116,41120,43704,46012,49158,52592,53949,56848,60327,66675,68312,80323,
#Partially deleted in new
chr2	201701686	201744388	chr2:201701686-201744388	0	-	201720035	201744388	789624	26	203,97,150,62,46,177,123,158,118,168,134,143,78,112,165,99,66,203,67,71,129,132,163,66,181,131,	0,2435,2767,3452,3729,5159,6182,8194,9304,13985,16390,18299,21356,21643,22608,23669,24797,24977,25525,26018,26825,27365,31589,36983,39987,42571,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr2	201721989	201780956	chr2:201721989-201780956	0	-	201721989	201721989	8553170	23	1131,112,165,99,66,203,67,71,129,132,163,66,181,172,183,78,97,169,358,938,155,80,80,	0,1340,2305,3366,4494,4674,5222,5715,6522,7062,11286,16680,19684,22268,24576,27722,31156,32513,35412,38891,45239,46876,58887,
#Partially deleted in new
chr2	201726835	201733453	chr2:201726835-201733453	0	-	201726835	201726835	8553170	5	31,67,129,132,178,	0,376,1676,2216,6440,
#Partially deleted in new
chr2	201728617	201738724	chr2:201728617-201738724	0	-	201728617	201728617	8553170	4	23,132,163,187,	0,434,4658,9920,
#Partially deleted in new
chr2	201741183	201780956	chr2:201741183-201780956	0	-	201741183	201741183	8553170	11	671,172,183,78,97,169,358,938,155,80,80,	0,3074,5382,8528,11962,13319,16218,19697,26045,27682,39693,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	201759456	201780956	chr2:201759456-201780956	1	-	201760802	201768885	789624	4	2362,155,80,80,	0,7772,9409,21420,
#Partially deleted in new
chr2	201761402	201780956	chr2:201761402-201780956	0	-	201761402	201761402	8553170	5	416,37,155,80,80,	0,4388,5826,7463,19474,
#Partially deleted in new
chr2	201761575	201780922	chr2:201761575-201780922	0	-	201761575	201768885	789624	5	243,155,80,47,46,	0,5653,7290,16865,19301,
#Partially deleted in new
chr2	201761674	201780951	chr2:201761674-201780951	0	-	201761674	201768885	789624	5	144,155,80,105,75,	0,5554,7191,18304,19202,
#Deleted in new
chr2	201762736	201763573	chr2:201762736-201763573	7	+	201762736	201762736	16724991	1	837,	0,
#Partially deleted in new
chr2	201765382	201780911	chr2:201765382-201780911	0	-	201765382	201765382	8553170	4	221,155,80,35,	0,1846,3483,15494,
#Partially deleted in new
chr2	201790460	201893543	chr2:201790460-201893543	3	+	201807523	201890894	789624	15	200,119,150,95,80,95,63,124,121,94,64,49,140,143,243,	0,15968,17033,17397,22022,32348,33204,43387,45182,56920,64413,81817,89567,100324,102840,
#Partially deleted in new
chr2	201790460	201876583	chr2:201790460-201876583	0	+	201807523	201807897	789624	14	200,118,119,150,100,80,95,63,124,121,94,64,49,60,	0,10323,15968,17033,17392,22022,32348,33204,43387,45182,56920,64413,81817,86063,
#Partially deleted in new
chr2	201790471	201807938	chr2:201790471-201807938	0	+	201790471	201790471	8553170	4	189,119,150,86,	0,15957,17022,17381,
#Partially deleted in new
chr2	201806374	201893544	chr2:201806374-201893544	1	+	201807523	201890894	789624	14	173,150,95,80,95,63,124,121,94,64,49,140,143,244,	0,1119,1483,6108,16434,17290,27473,29268,41006,48499,65903,73653,84410,86926,
#Partially deleted in new
chr2	201806578	201895550	chr2:201806578-201895550	1	+	201806664	201890894	789624	14	209,150,95,80,95,63,124,121,94,64,49,140,125,2250,	0,915,1279,5904,16230,17086,27269,29064,40802,48295,65699,73449,84224,86722,
#Partially deleted in new
chr2	201806578	201861536	chr2:201806578-201861536	0	+	201806578	201806578	8553170	10	209,150,95,80,95,124,121,94,64,796,	0,915,1279,5904,16230,27269,29064,40802,48295,54162,
#Partially deleted in new
chr2	201806620	201889457	chr2:201806620-201889457	1	+	201806664	201888464	789624	13	167,150,95,80,95,63,124,121,94,64,49,140,998,	0,873,1237,5862,16188,17044,27227,29022,40760,48253,65657,73407,81839,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	201808680	201808782	chr2:201808680-201808782	3	+	201808680	201808680	8553170	1	102,	0,
#Deleted in new
chr2	201824547	201824832	chr2:201824547-201824832	7	+	201824547	201824547	16724991	1	285,	0,
#Partially deleted in new
chr2	201854759	201893360	chr2:201854759-201893360	0	+	201854759	201854759	8553170	5	178,49,140,143,60,	0,17518,25268,36025,38541,
#Partially deleted in new
chr2	201854789	201893383	chr2:201854789-201893383	0	+	201854789	201854789	8553170	4	148,140,143,83,	0,25238,35995,38511,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	201927438	201927543	chr2:201927438-201927543	3	+	201927438	201927438	8553170	1	105,	0,
#Deleted in new
chr2	202032769	202033537	chr2:202032769-202033537	3	-	202032769	202032769	8553170	1	768,	0,
#Deleted in new
chr2	202034586	202038445	chr2:202034586-202038445	3	+	202034647	202036372	0	1	3859,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	202073288	202154756	chr2:202073288-202154756	0	+	202073288	202073288	8553170	15	423,285,160,156,143,184,143,169,150,177,108,69,77,77,84,	0,1602,17481,19741,24146,26324,27018,29657,32472,36324,40050,51925,62734,65143,81384,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	202073288	202109664	chr2:202073288-202109664	0	+	202073627	202109664	789624	11	423,285,168,160,156,143,184,143,169,255,52,	0,1602,3643,17481,19741,24146,26324,27018,29657,32472,36324,
#Partially deleted in new
chr2	202073627	202205203	chr2:202073627-202205203	1	+	202073627	202202567	789624	24	84,285,160,156,143,184,143,169,150,177,111,69,77,138,73,91,166,115,320,203,173,220,159,206,	0,1263,17142,19402,23807,25985,26679,29318,32133,35985,39708,51586,64804,81045,91656,111125,113305,114524,116546,119673,120562,123172,128801,131370,
#Partially deleted in new
chr2	202073627	202197050	chr2:202073627-202197050	3	+	202073627	202197050	789624	22	84,285,160,156,143,184,143,169,255,177,111,69,77,138,73,91,166,115,320,203,173,251,	0,1263,17142,19402,23807,25985,26679,29318,32133,35985,39708,51586,64804,81045,91656,111125,113305,114524,116546,119673,120562,123172,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	202113625	202117058	chr2:202113625-202117058	3	-	202113625	202113625	8553170	2	963,2130,	0,1303,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	202135715	202197862	chr2:202135715-202197862	0	+	202135715	202135715	8553170	10	2793,138,73,91,166,115,320,203,173,1063,	0,18957,29568,49037,51217,52436,54458,57585,58474,61084,
#Partially deleted in new
chr2	202178659	202179391	chr2:202178659-202179391	3	-	202178659	202178659	8553170	2	189,122,	0,610,
#Partially deleted in new
chr2	202179296	202179971	chr2:202179296-202179971	7	+	202179296	202179296	16724991	1	675,	0,
#Deleted in new
chr2	202201383	202201886	chr2:202201383-202201886	7	-	202201383	202201383	16724991	1	503,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	202206179	202238608	chr2:202206179-202238608	3	-	202207252	202238451	0	5	1142,72,78,75,169,	0,4555,8177,13852,32260,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	202206186	202238599	chr2:202206186-202238599	1	-	202207252	202238451	0	6	617,69,72,78,75,160,	0,1066,4548,8170,13845,32253,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	202206649	202238594	chr2:202206649-202238594	1	-	202207252	202238451	789624	6	672,135,72,78,75,155,	0,1218,4085,7707,13382,31790,
#Partially deleted in new
chr2	202206767	202238566	chr2:202206767-202238566	1	-	202207252	202238451	0	4	554,72,78,127,	0,3967,7589,31672,
#Partially deleted in new
chr2	202206850	202238576	chr2:202206850-202238576	1	-	202207252	202238451	789624	4	471,78,75,137,	0,7506,13181,31589,
#Partially deleted in new
chr2	202206869	202238569	chr2:202206869-202238569	1	-	202210771	202238451	789624	5	452,49,78,75,130,	0,3865,7487,13162,31570,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	202207007	202238586	chr2:202207007-202238586	1	-	202207252	202214404	789624	6	314,72,78,75,93,147,	0,3727,7349,13024,26570,31432,
#Partially deleted in new
chr2	202207030	202238462	chr2:202207030-202238462	1	-	202207252	202214404	789624	5	291,72,73,75,23,	0,3704,7326,13001,31409,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	202207141	202238566	chr2:202207141-202238566	0	-	202220086	202238451	789624	6	180,72,78,75,190,127,	0,3593,7215,12890,24401,31298,
#Partially deleted in new
chr2	202207245	202222006	chr2:202207245-202222006	0	-	202207245	202207245	8553170	5	76,72,78,75,210,	0,3489,7111,12786,14551,
#Deleted in new
chr2	202231695	202231849	chr2:202231695-202231849	7	+	202231695	202231695	16724991	1	154,	0,
#Partially deleted in new
chr2	202265715	202303666	chr2:202265715-202303666	3	+	202265941	202303436	789624	15	271,77,53,122,137,65,135,146,127,164,135,62,134,137,281,	0,9397,12234,16635,18629,21944,24607,25409,27061,29958,31663,32129,34518,37205,37670,
#Partially deleted in new
chr2	202265735	202284378	chr2:202265735-202284378	0	+	202265941	202278243	789624	6	251,77,53,118,122,34,	0,9377,12214,12476,16615,18609,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	202265735	202284712	chr2:202265735-202284712	0	+	202265735	202265735	8553170	5	251,77,53,122,368,	0,9377,12214,16615,18609,
#Partially deleted in new
chr2	202265764	202284434	chr2:202265764-202284434	0	+	202265764	202265764	8553170	5	222,77,53,122,108,	0,9348,12185,16586,18562,
#Partially deleted in new
chr2	202265764	202275683	chr2:202265764-202275683	0	+	202265764	202265764	8553170	2	222,571,	0,9348,
#Partially deleted in new
chr2	202265778	202284481	chr2:202265778-202284481	0	+	202265778	202265778	8553170	5	208,53,118,122,137,	0,12171,12433,16572,18566,
#Partially deleted in new
chr2	202275161	202291051	chr2:202275161-202291051	0	+	202275161	202275161	8553170	7	28,53,122,137,65,135,31,	0,2788,7189,9183,12498,15161,15859,
#Deleted in new
chr2	202276430	202276518	chr2:202276430-202276518	3	+	202276430	202276430	789624	1	88,	0,
#Deleted in new
chr2	202278107	202278192	chr2:202278107-202278192	3	+	202278107	202278107	8553170	1	85,	0,
#Partially deleted in new
chr2	202278130	202290372	chr2:202278130-202290372	0	+	202278130	202278130	8553170	4	199,122,137,50,	0,4220,6214,12192,
#Partially deleted in new
chr2	202284437	202297906	chr2:202284437-202297906	0	+	202284437	202297425	789624	7	44,65,135,146,127,135,62,	0,3222,5885,6687,8339,12941,13407,
#Deleted in new
chr2	202291331	202291421	chr2:202291331-202291421	3	+	202291331	202291331	789624	1	90,	0,
#Partially deleted in new
chr2	202293050	202293134	chr2:202293050-202293134	3	+	202293050	202293050	789624	1	84,	0,
#Partially deleted in new
chr2	202299857	202303433	chr2:202299857-202303433	0	+	202299857	202299857	8553170	4	280,134,137,48,	0,376,3063,3528,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	202333438	202333728	chr2:202333438-202333728	3	+	202333438	202333438	8553170	1	290,	0,
#Partially deleted in new
chr2	202336023	202336727	chr2:202336023-202336727	7	-	202336023	202336023	16724991	1	704,	0,
#Partially deleted in new
chr2	202336738	202337200	chr2:202336738-202337200	3	+	202336738	202336738	8553170	1	462,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	202357075	202357417	chr2:202357075-202357417	3	-	202357075	202357075	8553170	1	342,	0,
#Deleted in new
chr2	202374931	202375604	chr2:202374931-202375604	3	-	202374931	202374931	8553170	1	673,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	202376935	202567751	chr2:202376935-202567751	3	+	202377474	202559946	0	13	615,171,171,111,92,231,115,161,148,137,173,1280,8056,	0,87873,90583,136783,137952,141886,143151,153858,155649,165375,175780,178316,182760,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	202377433	202567751	chr2:202377433-202567751	1	+	202377474	202559702	0	12	117,171,171,111,92,231,115,161,148,137,173,8056,	0,87375,90085,136285,137454,141388,142653,153360,155151,164877,175282,182262,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	202464825	202475139	chr2:202464825-202475139	0	+	202464825	202464825	8553170	3	154,171,432,	0,2693,9882,
#Deleted in new
chr2	202505011	202505343	chr2:202505011-202505343	7	-	202505011	202505011	16724991	1	332,	0,
#Deleted in new
chr2	202520400	202520989	chr2:202520400-202520989	7	+	202520400	202520400	16724991	1	589,	0,
#Deleted in new
chr2	202614213	202614704	chr2:202614213-202614704	7	+	202614213	202614213	16724991	1	491,	0,
#Deleted in new
chr2	202614852	202615529	chr2:202614852-202615529	7	+	202614852	202614852	16724991	1	677,	0,
#Deleted in new
chr2	202615768	202616440	chr2:202615768-202616440	7	+	202615768	202615768	16724991	1	672,	0,
#Deleted in new
chr2	202616699	202617212	chr2:202616699-202617212	7	+	202616699	202616699	16724991	1	513,	0,
#Deleted in new
chr2	202617283	202617627	chr2:202617283-202617627	7	+	202617283	202617283	16724991	1	344,	0,
#Deleted in new
chr2	202617694	202617987	chr2:202617694-202617987	7	+	202617694	202617694	16724991	1	293,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	202617982	202618881	chr2:202617982-202618881	7	+	202617982	202617982	16724991	1	899,	0,
#Deleted in new
chr2	202619184	202619896	chr2:202619184-202619896	7	-	202619184	202619184	16724991	1	712,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	202635187	202769757	chr2:202635187-202769757	3	+	202635187	202765764	789624	8	601,152,93,114,144,226,121,4312,	0,60693,89729,91062,120350,122025,124045,130258,
#Partially deleted in new
chr2	202635488	202725232	chr2:202635488-202725232	0	+	202635488	202635488	8553170	3	300,152,316,	0,60392,89428,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	202773149	202871472	chr2:202773149-202871472	3	-	202779532	202829009	789624	13	6499,90,258,75,44,83,99,126,199,124,73,169,312,	0,12768,15680,23740,38596,41552,42761,44268,46551,48208,52545,55698,98011,
#Deleted in new
chr2	202773719	202773935	chr2:202773719-202773935	5	-	202773719	202773719	16724991	1	216,	0,
#Deleted in new
chr2	202774024	202774360	chr2:202774024-202774360	7	-	202774024	202774024	16724991	1	336,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	202775966	202871642	chr2:202775966-202871642	1	-	202779532	202829009	789624	14	3682,90,258,75,44,83,99,126,199,124,73,169,127,24,	0,9951,12863,20923,35779,38735,39944,41451,43734,45391,49728,52881,94563,95652,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	202777898	202871985	chr2:202777898-202871985	1	-	202779532	202829009	789624	13	1750,90,258,75,44,83,99,126,199,124,73,169,367,	0,8019,10931,18991,33847,36803,38012,39519,41802,43459,47796,50949,93720,
#Partially deleted in new
chr2	202779069	202871455	chr2:202779069-202871455	0	-	202786698	202829009	789624	16	579,90,100,258,75,44,83,99,126,199,124,73,169,70,127,265,	0,6848,7606,9760,17820,32676,35632,36841,38348,40631,42288,46625,49778,90466,91460,92121,
#Partially deleted in new
chr2	202788989	202870761	chr2:202788989-202870761	0	-	202788989	202829009	789624	4	98,73,169,232,	0,36705,39858,81540,
#Partially deleted in new
chr2	202814756	202820021	chr2:202814756-202820021	0	-	202814756	202814756	8553170	4	28,99,126,321,	0,1154,2661,4944,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	202819604	202829234	chr2:202819604-202829234	1	-	202819694	202829009	789624	4	295,124,73,387,	0,1753,6090,9243,
#Partially deleted in new
chr2	202819604	202821756	chr2:202819604-202821756	0	-	202819604	202819604	8553170	2	295,399,	0,1753,
#Partially deleted in new
chr2	202819725	202870788	chr2:202819725-202870788	1	-	202819827	202829009	789624	3	174,169,259,	0,9122,50804,
#Partially deleted in new
chr2	202819806	202871046	chr2:202819806-202871046	0	-	202819806	202829009	789624	5	93,124,73,169,117,	0,1551,5888,9041,51123,
#Partially deleted in new
chr2	202819856	202871266	chr2:202819856-202871266	0	-	202819856	202829009	789624	5	43,124,73,169,106,	0,1501,5838,8991,51304,
#Partially deleted in new
chr2	202819886	202871735	chr2:202819886-202871735	0	-	202819886	202829009	789624	6	13,124,73,169,70,117,	0,1471,5808,8961,49649,51732,
#Partially deleted in new
chr2	202821358	202871651	chr2:202821358-202871651	0	-	202821358	202829009	789624	6	123,73,169,70,127,33,	0,4336,7489,48177,49171,50260,
#Partially deleted in new
chr2	202821382	202871246	chr2:202821382-202871246	0	-	202825727	202829009	789624	6	99,54,169,70,127,56,	0,4312,7465,48153,49147,49808,
#Partially deleted in new
chr2	202821416	202871442	chr2:202821416-202871442	0	-	202821416	202829009	789624	4	65,73,169,252,	0,4278,7431,49774,
#Partially deleted in new
chr2	202821419	202870914	chr2:202821419-202870914	0	-	202821419	202829009	789624	4	62,73,169,385,	0,4275,7428,49110,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	202821421	202871646	chr2:202821421-202871646	0	-	202821421	202829009	789624	6	60,73,169,146,86,28,	0,4273,7426,22815,23080,50197,
#Partially deleted in new
chr2	202821426	202870876	chr2:202821426-202870876	0	-	202821426	202829009	789624	5	55,73,169,70,347,	0,4268,7421,48109,49103,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	202825444	202871475	chr2:202825444-202871475	0	-	202825444	202825444	8553170	5	323,169,70,127,285,	0,3403,44091,45085,45746,
#Partially deleted in new
chr2	202825694	202871046	chr2:202825694-202871046	0	-	202825694	202829009	789624	5	73,169,70,127,117,	0,3153,43841,44835,45235,
#Partially deleted in new
chr2	202828882	202871467	chr2:202828882-202871467	0	-	202828882	202829009	789624	3	134,127,538,	0,41647,42047,
#Deleted in new
chr2	202840330	202841781	chr2:202840330-202841781	7	-	202840330	202840330	16724991	1	1451,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	202874781	202912226	chr2:202874781-202912226	3	-	202880859	202911476	789624	13	6156,73,133,106,141,86,46,155,116,107,95,95,791,	0,7929,8827,9416,9613,17835,19799,21283,22518,24749,26243,33083,36654,
#Partially deleted in new
chr2	202880600	202882855	chr2:202880600-202882855	0	-	202880600	202880600	8553170	2	337,145,	0,2110,
#Partially deleted in new
chr2	202883472	202884240	chr2:202883472-202884240	0	-	202883472	202883472	8553170	2	269,43,	0,725,
#Partially deleted in new
chr2	202883588	202884535	chr2:202883588-202884535	0	-	202883588	202883588	8553170	2	153,338,	0,609,
#Partially deleted in new
chr2	202884140	202892674	chr2:202884140-202892674	0	-	202884140	202884140	8553170	3	163,141,58,	0,254,8476,
#Partially deleted in new
chr2	202884237	202894765	chr2:202884237-202894765	0	-	202884237	202884237	8553170	4	66,141,86,185,	0,157,8379,10343,
#Partially deleted in new
chr2	202895997	202901120	chr2:202895997-202901120	0	-	202895997	202895997	8553170	4	222,116,107,96,	0,1302,3533,5027,
#Partially deleted in new
chr2	202899556	203014798	chr2:202899556-203014798	0	-	202899556	202899556	8553170	5	81,95,95,193,242,	0,1468,8308,25719,115000,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	202912213	202987063	chr2:202912213-202987063	3	+	202941902	202983624	789624	16	111,167,121,228,121,130,85,190,121,144,234,163,64,131,370,3558,	0,5663,29646,30526,40345,41791,43460,49023,54764,57705,59291,62120,65055,69341,69858,71292,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	202912217	202986485	chr2:202912217-202986485	1	+	202941902	202983624	789624	16	107,81,167,121,121,130,85,190,121,144,234,163,64,131,370,2980,	0,816,5659,29642,40341,41787,43456,49019,54760,57701,59287,62116,65051,69337,69854,71288,
#Partially deleted in new
chr2	202912246	202952620	chr2:202912246-202952620	0	+	202942751	202952620	789624	5	78,167,59,228,62,	0,5630,12110,30493,40312,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	202912254	202963168	chr2:202912254-202963168	1	+	202941902	202961524	789624	8	70,167,121,228,121,130,85,1932,	0,5622,29605,30485,40304,41750,43419,48982,
#Partially deleted in new
chr2	202912272	202952647	chr2:202912272-202952647	0	+	202941902	202952647	789624	6	52,69,167,121,228,89,	0,761,5604,29587,30467,40286,
#Partially deleted in new
chr2	202912276	202974354	chr2:202912276-202974354	0	+	202942751	202973500	789624	12	48,167,228,121,130,85,190,121,144,234,103,21,	0,5600,30463,40282,41728,43397,48960,54701,57642,59228,61205,62057,
#Partially deleted in new
chr2	202912278	202942881	chr2:202912278-202942881	0	+	202941902	202942881	789624	5	46,167,119,121,142,	0,5598,12018,29581,30461,
#Partially deleted in new
chr2	202912278	202942867	chr2:202912278-202942867	0	+	202942751	202942867	789624	4	46,167,119,128,	0,5598,12018,30461,
#Partially deleted in new
chr2	202912282	202983642	chr2:202912282-202983642	1	+	202952558	202983624	789624	14	42,167,121,130,85,190,121,144,234,163,64,131,370,137,	0,5594,40276,41722,43391,48954,54695,57636,59222,62051,64986,69272,69789,71223,
#Partially deleted in new
chr2	202912282	202983935	chr2:202912282-202983935	1	+	202941902	202983624	789624	15	42,167,121,121,130,85,190,121,144,234,163,64,131,370,430,	0,5594,29577,40276,41722,43391,48954,54695,57636,59222,62051,64986,69272,69789,71223,
#Partially deleted in new
chr2	202912282	202942947	chr2:202912282-202942947	0	+	202941902	202942947	789624	5	42,167,59,121,208,	0,5594,12074,29577,30457,
#Partially deleted in new
chr2	202912282	202967012	chr2:202912282-202967012	0	+	202912282	202912282	8553170	8	42,167,121,228,121,130,85,35,	0,5594,29577,30457,40276,41722,43391,54695,
#Partially deleted in new
chr2	202912283	202954045	chr2:202912283-202954045	0	+	202941902	202954045	789624	6	41,81,167,121,121,41,	0,750,5593,29576,40275,41721,
#Partially deleted in new
chr2	202912285	202971605	chr2:202912285-202971605	0	+	202942751	202966995	789624	9	39,167,228,121,130,85,121,144,101,	0,5591,30454,40273,41719,43388,54692,57633,59219,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	202912288	202962533	chr2:202912288-202962533	1	+	202952558	202961524	789624	7	36,167,119,121,130,85,1297,	0,5588,12008,40270,41716,43385,48948,
#Partially deleted in new
chr2	202912291	202955699	chr2:202912291-202955699	0	+	202941902	202942786	789624	9	33,81,167,59,121,205,121,130,26,	0,742,5585,12065,29568,30471,40267,41713,43382,
#Partially deleted in new
chr2	202912600	202984189	chr2:202912600-202984189	1	+	202941902	202983624	789624	17	502,167,119,121,228,121,130,85,190,121,144,234,163,64,131,370,684,	0,5276,11696,29259,30139,39958,41404,43073,48636,54377,57318,58904,61733,64668,68954,69471,70905,
#Deleted in new
chr2	202924608	202925904	chr2:202924608-202925904	7	+	202924608	202924608	16724991	1	1296,	0,
#Partially deleted in new
chr2	202995193	202995403	chr2:202995193-202995403	7	+	202995193	202995193	16724991	1	210,	0,
#Boundary problem: need 55, got 0, diff 55, mapped 0.0
chr2	203014878	203219874	chr2:203014878-203219874	3	+	203016384	203217354	789624	55	104,280,92,162,82,128,83,86,307,107,84,99,581,133,120,304,86,90,169,134,160,103,157,159,160,89,576,176,154,129,306,150,158,125,127,149,134,105,96,125,141,131,110,118,98,117,90,110,173,95,117,162,149,136,2622,	0,1277,26886,34935,41548,42447,53514,62873,68340,69584,84750,92541,92729,95271,97100,98136,101106,107375,110473,111081,111678,111945,112902,115439,117094,118179,120798,121720,123283,123741,129721,130132,134112,136586,142820,151270,152348,154868,157049,157850,160268,165503,168400,173593,175413,178916,182423,184459,186664,187808,193758,194282,196079,198639,202374,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	203014878	203086212	chr2:203014878-203086212	0	+	203014878	203014878	8553170	11	104,280,92,162,82,128,83,86,307,107,941,	0,1277,26886,34935,41548,42447,53514,62873,68340,69584,70393,
#Partially deleted in new
chr2	203014924	203062488	chr2:203014924-203062488	0	+	203014924	203014924	8553170	7	58,280,92,162,82,128,210,	0,1231,26840,34889,41502,42401,47354,
#Partially deleted in new
chr2	203015790	203041857	chr2:203015790-203041857	0	+	203015790	203015790	8553170	3	74,272,93,	0,365,25974,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	203016364	203050168	chr2:203016364-203050168	0	+	203016364	203016364	8553170	3	71,92,355,	0,25400,33449,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	203040107	203040899	chr2:203040107-203040899	7	+	203040107	203040107	16724991	2	649,92,	0,700,
#Partially deleted in new
chr2	203052284	203052418	chr2:203052284-203052418	3	-	203052284	203052284	8553170	1	134,	0,
#Partially deleted in new
chr2	203061313	203062403	chr2:203061313-203062403	7	-	203061313	203061313	16724991	1	1090,	0,
#Deleted in new
chr2	203074684	203075142	chr2:203074684-203075142	7	-	203074684	203074684	16724991	1	458,	0,
#Partially deleted in new
chr2	203083236	203097599	chr2:203083236-203097599	0	+	203083236	203083236	8553170	3	289,107,53,	0,1226,14310,
#Deleted in new
chr2	203083498	203085008	chr2:203083498-203085008	0	+	203083498	203083498	8553170	2	27,546,	0,964,
#Partially deleted in new
chr2	203167309	203217464	chr2:203167309-203217464	0	+	203167309	203217354	789624	18	51,105,125,141,131,110,118,98,117,90,110,173,95,117,162,149,136,212,	0,2437,5419,7837,13072,15969,21162,22982,26485,29992,32028,34233,35377,41327,41851,43648,46208,49943,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	203180955	203191335	chr2:203180955-203191335	0	+	203180955	203180955	8553170	3	2433,118,1044,	0,7516,9336,
#Deleted in new
chr2	203190779	203191277	chr2:203190779-203191277	7	+	203190779	203190779	16724991	1	498,	0,
#Partially deleted in new
chr2	203208634	203226378	chr2:203208634-203226378	0	+	203208634	203226150	789624	6	119,162,149,136,98,256,	0,526,2323,4883,8618,17488,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	203238939	203297345	chr2:203238939-203297345	3	+	203239062	203296908	789624	13	195,50,167,143,168,79,116,55,121,112,65,90,588,	0,6906,7815,13027,27574,33730,39633,41119,46672,50825,53322,57534,57818,
#Partially deleted in new
chr2	203238976	203297242	chr2:203238976-203297242	0	+	203239062	203278599	789624	12	158,50,167,143,168,116,55,121,112,65,90,485,	0,6869,7778,12990,27537,39596,41082,46635,50788,53285,57497,57781,
#Partially deleted in new
chr2	203238981	203297226	chr2:203238981-203297226	1	+	203239062	203296908	789624	13	153,50,167,143,168,103,116,55,121,112,65,90,469,	0,6864,7773,12985,27532,33664,39591,41077,46630,50783,53280,57492,57776,
#Partially deleted in new
chr2	203238981	203297014	chr2:203238981-203297014	0	+	203238981	203238981	8553170	11	153,143,168,79,116,55,121,112,65,90,257,	0,12985,27532,33688,39591,41077,46630,50783,53280,57492,57776,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	203239008	203305611	chr2:203239008-203305611	1	+	203280073	203296908	789624	14	126,50,167,143,168,79,116,55,121,112,65,90,531,163,	0,6837,7746,12958,27505,33661,39564,41050,46603,50756,53253,57465,57749,66440,
#Partially deleted in new
chr2	203239010	203285679	chr2:203239010-203285679	0	+	203239010	203239010	8553170	6	124,143,168,116,55,68,	0,12956,27503,39562,41048,46601,
#Partially deleted in new
chr2	203239020	203280115	chr2:203239020-203280115	0	+	203239062	203251979	789624	6	114,50,143,168,116,57,	0,6825,12946,27493,39552,41038,
#Partially deleted in new
chr2	203239020	203285732	chr2:203239020-203285732	0	+	203239020	203239020	8553170	5	114,143,168,55,121,	0,12946,27493,41038,46591,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	203239026	203298286	chr2:203239026-203298286	0	+	203239062	203251979	789624	12	108,50,143,168,79,116,55,121,112,65,90,1529,	0,6819,12940,27487,33643,39546,41032,46585,50738,53235,57447,57731,
#Partially deleted in new
chr2	203239034	203285732	chr2:203239034-203285732	0	+	203239062	203285732	789624	7	100,50,167,143,168,55,121,	0,6811,7720,12932,27479,41024,46577,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	203259603	203259897	chr2:203259603-203259897	3	+	203259603	203259603	8553170	1	294,	0,
#Deleted in new
chr2	203315389	203315871	chr2:203315389-203315871	7	-	203315389	203315389	16724991	1	482,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	203328218	203447723	chr2:203328218-203447723	1	+	203328514	203427352	789624	11	413,168,177,18,98,147,125,183,159,174,20547,	0,38658,51989,53970,62827,66481,67437,68566,74357,88689,98958,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	203328238	203432172	chr2:203328238-203432172	1	+	203376015	203427352	789624	10	393,164,201,177,98,147,125,159,174,4996,	0,38642,47693,51969,62807,66461,67417,74337,88669,98938,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	203328238	203432172	chr2:203328238-203432172	1	+	203328514	203427352	789624	11	393,168,177,18,98,147,125,183,159,174,4996,	0,38638,51969,53950,62807,66461,67417,68546,74337,88669,98938,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	203328279	203432173	chr2:203328279-203432173	3	+	203328514	203427352	789624	10	352,168,177,98,147,125,159,87,174,4997,	0,38597,51928,62766,66420,67376,74296,83005,88628,98897,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	203328281	203380306	chr2:203328281-203380306	0	+	203328514	203351665	789624	4	350,124,168,99,	0,23273,38595,51926,
#Partially deleted in new
chr2	203328390	203427569	chr2:203328390-203427569	0	+	203328514	203402602	789624	5	241,120,159,174,393,	0,38486,74185,88517,98786,
#Partially deleted in new
chr2	203328391	203427528	chr2:203328391-203427528	1	+	203328514	203427352	789624	9	240,168,177,98,125,183,159,174,352,	0,38485,51816,62654,67264,68393,74184,88516,98785,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	203328393	203366957	chr2:203328393-203366957	0	+	203328514	203355216	789624	3	238,171,81,	0,26760,38483,
#Partially deleted in new
chr2	203328394	203376132	chr2:203328394-203376132	0	+	203328514	203366887	789624	4	237,34,168,76,	0,13802,38482,47662,
#Partially deleted in new
chr2	203328394	203427948	chr2:203328394-203427948	1	+	203328514	203427352	789624	10	237,168,177,98,147,125,183,159,174,772,	0,38482,51813,62651,66305,67261,68390,74181,88513,98782,
#Partially deleted in new
chr2	203328398	203380277	chr2:203328398-203380277	0	+	203328514	203376065	789624	5	233,168,33,76,70,	0,38478,46421,47658,51809,
#Partially deleted in new
chr2	203328404	203380273	chr2:203328404-203380273	0	+	203328514	203366901	789624	5	227,161,33,76,66,	0,38479,46415,47652,51803,
#Partially deleted in new
chr2	203328406	203427269	chr2:203328406-203427269	0	+	203328514	203427269	789624	11	225,168,177,18,98,147,125,183,159,174,93,	0,38470,51801,53782,62639,66293,67249,68378,74169,88501,98770,
#Partially deleted in new
chr2	203328457	203367419	chr2:203328457-203367419	0	+	203328457	203328457	8553170	2	174,543,	0,38419,
#Partially deleted in new
chr2	203328458	203383296	chr2:203328458-203383296	0	+	203328458	203328458	8553170	4	173,168,177,50,	0,38418,51749,54788,
#Deleted in new
chr2	203328458	203329226	chr2:203328458-203329226	3	-	203328458	203328458	8553170	2	23,404,	0,364,
#Partially deleted in new
chr2	203328483	203428596	chr2:203328483-203428596	1	+	203328514	203427352	789624	11	148,168,177,18,98,147,125,84,159,174,1420,	0,38393,51724,53705,62562,66216,67172,68400,74092,88424,98693,
#Partially deleted in new
chr2	203366922	203427528	chr2:203366922-203427528	0	+	203366922	203376065	789624	9	122,76,177,98,147,125,159,174,352,	0,9134,13285,24123,27777,28733,35653,49985,60254,
#Partially deleted in new
chr2	203380225	203402677	chr2:203380225-203402677	0	+	203380225	203380225	8553170	6	159,18,98,125,183,102,	0,1963,10820,15430,16559,22350,
#Partially deleted in new
chr2	203380274	203416983	chr2:203380274-203416983	0	+	203380274	203380274	8553170	7	110,98,147,125,159,45,76,	0,10771,14425,15381,22301,23042,36633,
#Partially deleted in new
chr2	203380307	203402734	chr2:203380307-203402734	0	+	203380307	203402734	789624	5	77,98,147,122,159,	0,10738,14392,15351,22268,
#Partially deleted in new
chr2	203380357	203416972	chr2:203380357-203416972	0	+	203380357	203380357	8553170	5	27,98,125,159,65,	0,10688,15298,22218,36550,
#Partially deleted in new
chr2	203391043	203427411	chr2:203391043-203427411	0	+	203391043	203427352	789624	6	100,147,125,159,174,235,	0,3656,4612,11532,25864,36133,
#Partially deleted in new
chr2	203394344	203535262	chr2:203394344-203535262	1	-	203395080	203495353	789624	14	745,143,121,99,111,144,66,122,160,78,506,106,120,152,	0,50523,53614,54393,60085,61092,63185,65562,66904,67503,95239,96869,100889,140766,
#Partially deleted in new
chr2	203394747	203427219	chr2:203394747-203427219	0	+	203394747	203394747	8553170	5	99,159,87,174,43,	0,7828,16537,22160,32429,
#Partially deleted in new
chr2	203402705	203436883	chr2:203402705-203436883	0	+	203402705	203402705	8553170	5	29,87,174,93,213,	0,8579,14202,24471,33965,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	203433681	203535410	chr2:203433681-203535410	3	-	203439436	203495353	0	14	7732,143,121,99,111,144,66,122,160,78,506,106,120,300,	0,11186,14277,15056,20748,21755,23848,26225,27567,28166,55902,57532,61552,101429,
#Partially deleted in new
chr2	203439436	203495353	chr2:203439436-203495353	1	-	203439436	203495353	789624	15	1977,143,121,99,111,144,66,122,160,78,75,81,506,106,120,	0,5431,8522,9301,14993,16000,18093,20470,21812,22411,30802,37639,50147,51777,55797,
#Partially deleted in new
chr2	203439436	203535335	chr2:203439436-203535335	1	-	203439436	203495353	789624	16	1977,143,121,99,111,144,66,122,160,78,75,81,506,106,120,225,	0,5431,8522,9301,14993,16000,18093,20470,21812,22411,30802,37639,50147,51777,55797,95674,
#Partially deleted in new
chr2	203441469	203535335	chr2:203441469-203535335	1	-	203442077	203495353	0	16	611,143,121,99,111,144,66,122,160,78,75,81,506,106,120,225,	0,3398,6489,7268,12960,13967,16060,18437,19779,20378,28769,35606,48114,49744,53764,93641,
#Partially deleted in new
chr2	203442077	203495353	chr2:203442077-203495353	1	-	203442077	203495353	0	13	3,143,121,99,111,144,66,122,160,78,506,106,120,	0,2790,5881,6660,12352,13359,15452,17829,19171,19770,47506,49136,53156,
#Partially deleted in new
chr2	203442077	203495353	chr2:203442077-203495353	1	-	203442077	203495353	0	14	3,143,121,99,111,144,66,122,160,78,81,506,106,120,	0,2790,5881,6660,12352,13359,15452,17829,19171,19770,34998,47506,49136,53156,
#Partially deleted in new
chr2	203442077	203495353	chr2:203442077-203495353	1	-	203442077	203495353	0	14	3,143,121,99,111,144,66,122,160,78,75,506,106,120,	0,2790,5881,6660,12352,13359,15452,17829,19171,19770,28161,47506,49136,53156,
#Partially deleted in new
chr2	203444630	203535335	chr2:203444630-203535335	1	-	203444849	203495353	0	15	380,121,99,111,144,66,122,160,78,75,81,506,106,120,225,	0,3328,4107,9799,10806,12899,15276,16618,17217,25608,32445,44953,46583,50603,90480,
#Partially deleted in new
chr2	203444849	203495353	chr2:203444849-203495353	1	-	203444849	203495353	0	12	161,121,99,111,144,66,122,160,78,506,106,120,	0,3109,3888,9580,10587,12680,15057,16399,16998,44734,46364,50384,
#Partially deleted in new
chr2	203489799	203533433	chr2:203489799-203533433	0	-	203489799	203495353	789624	4	290,106,120,69,	0,1414,5434,43565,
#Partially deleted in new
chr2	203490045	203535335	chr2:203490045-203535335	0	-	203490045	203495353	789624	4	41,106,120,225,	0,1168,5188,45065,
#Partially deleted in new
chr2	203495162	203535279	chr2:203495162-203535279	0	-	203495162	203495162	8553170	2	191,169,	0,39948,
#Partially deleted in new
chr2	203634576	203636016	chr2:203634576-203636016	7	-	203634576	203634576	16724991	1	1440,	0,
#Deleted in new
chr2	203672174	203672423	chr2:203672174-203672423	7	-	203672174	203672174	16724991	1	249,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	203706474	203738910	chr2:203706474-203738910	1	+	203706696	203734912	0	3	274,125,4127,	0,23173,28309,
#Partially deleted in new
chr2	203706523	203734912	chr2:203706523-203734912	1	+	203706523	203734912	0	4	94,357,125,129,	0,20109,23124,28260,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	203706547	203738912	chr2:203706547-203738912	3	+	203706696	203734912	0	4	201,357,125,4129,	0,20085,23100,28236,
#Deleted in new
chr2	203764294	203765593	chr2:203764294-203765593	7	-	203764294	203764294	16724991	1	1299,	0,
#Deleted in new
chr2	203772630	203773502	chr2:203772630-203773502	7	-	203772630	203772630	16724991	1	872,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	203782036	203782143	chr2:203782036-203782143	3	+	203782036	203782036	8553170	1	107,	0,
#Deleted in new
chr2	203867770	203873960	chr2:203867770-203873960	3	+	203867942	203872812	8553170	4	281,348,110,1253,	0,2815,3607,4937,
#Deleted in new
chr2	203867785	203873965	chr2:203867785-203873965	1	+	203867942	203872812	0	4	266,348,110,1258,	0,2800,3592,4922,
#Deleted in new
chr2	203867942	203872775	chr2:203867942-203872775	1	+	203867942	203872775	0	3	109,348,68,	0,2643,4765,
#Deleted in new
chr2	203867942	203872812	chr2:203867942-203872812	1	+	203867942	203872775	0	3	109,63,105,	0,2643,4765,
#Deleted in new
chr2	203867942	203872812	chr2:203867942-203872812	1	+	203867942	203872775	8553170	2	109,105,	0,4765,
#Deleted in new
chr2	203870231	203873090	chr2:203870231-203873090	0	+	203870231	203870231	8553170	3	143,348,383,	0,354,2476,
#Deleted in new
chr2	203870241	203872856	chr2:203870241-203872856	0	+	203870241	203870241	8553170	4	133,348,110,149,	0,344,1136,2466,
#Partially deleted in new
chr2	203936747	203961577	chr2:203936747-203961577	3	+	203936814	203959599	789624	5	125,336,107,85,1992,	0,18888,19911,21051,22838,
#Partially deleted in new
chr2	203936779	203961577	chr2:203936779-203961577	1	+	203936814	203959591	789624	4	93,336,107,1992,	0,18856,19879,22806,
#Partially deleted in new
chr2	204065705	204067363	chr2:204065705-204067363	7	+	204065705	204065705	16724991	2	602,368,	0,1290,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	204090456	204109849	chr2:204090456-204109849	3	+	204090456	204090456	8553170	5	136,107,59,157,111,	0,886,11757,15894,19282,
#Partially deleted in new
chr2	204228136	204234985	chr2:204228136-204234985	3	-	204228136	204228136	8553170	2	347,194,	0,6655,
#Deleted in new
chr2	204306841	204307364	chr2:204306841-204307364	7	+	204306841	204306841	16724991	1	523,	0,
#Deleted in new
chr2	204379094	204379792	chr2:204379094-204379792	7	+	204379094	204379094	16724991	1	698,	0,
#Partially deleted in new
chr2	204470075	204473837	chr2:204470075-204473837	3	-	204470075	204470075	8553170	2	376,212,	0,3550,
#Partially deleted in new
chr2	204475355	204507672	chr2:204475355-204507672	3	+	204475355	204475355	8553170	2	268,58,	0,32259,
#Partially deleted in new
chr2	204545792	205620162	chr2:204545792-205620162	3	+	204545999	205615813	789624	23	327,102,172,110,89,87,126,359,140,129,186,171,133,100,116,45,207,238,111,303,136,80,4707,	0,140388,419359,501788,558633,567698,573128,575798,578534,579816,612929,626418,630652,639971,647412,699985,754737,755671,855220,894577,954103,1007531,1069663,
#Partially deleted in new
chr2	204545792	205048595	chr2:204545792-205048595	0	+	204545999	204686248	789624	4	379,102,172,1015,	0,140388,419359,501788,
#Partially deleted in new
chr2	204545839	205301907	chr2:204545839-205301907	1	+	204545999	205301907	789624	19	280,102,172,110,89,87,126,359,140,129,186,171,133,100,116,45,207,287,129,	0,140341,419312,501741,558586,567651,573081,575751,578487,579769,612882,626371,630605,639924,647365,699938,754690,755624,755939,
#Partially deleted in new
chr2	204545841	204558186	chr2:204545841-204558186	0	+	204545841	204545841	8553170	2	278,163,	0,12182,
#Partially deleted in new
chr2	204545999	205615813	chr2:204545999-205615813	1	+	204545999	205615813	789624	22	120,102,172,110,89,87,126,359,140,129,186,171,133,100,116,45,207,238,111,136,80,358,	0,140181,419152,501581,558426,567491,572921,575591,578327,579609,612722,626211,630445,639764,647205,699778,754530,755464,855013,953896,1007324,1069456,
#Partially deleted in new
chr2	204545999	205615813	chr2:204545999-205615813	1	+	204545999	205615813	789624	22	120,102,172,110,89,87,126,359,140,129,186,171,133,100,116,45,238,111,303,136,80,358,	0,140181,419152,501581,558426,567491,572921,575591,578327,579609,612722,626211,630445,639764,647205,699778,755464,855013,894370,953896,1007324,1069456,
#Partially deleted in new
chr2	204545999	205615813	chr2:204545999-205615813	1	+	204545999	205615813	789624	22	120,102,172,110,89,87,126,359,140,129,171,133,100,116,45,207,238,111,303,136,80,358,	0,140181,419152,501581,558426,567491,572921,575591,578327,579609,626211,630445,639764,647205,699778,754530,755464,855013,894370,953896,1007324,1069456,
#Partially deleted in new
chr2	204965151	205620162	chr2:204965151-205620162	1	+	204965151	205615813	789624	20	172,110,89,87,126,359,140,129,171,133,100,116,45,207,238,111,303,136,80,4707,	0,82429,139274,148339,153769,156439,159175,160457,207059,211293,220612,228053,280626,335378,336312,435861,475218,534744,588172,650304,
#Partially deleted in new
chr2	204965151	205620162	chr2:204965151-205620162	1	+	204965151	205615813	789624	20	172,110,89,87,126,359,140,129,186,171,133,100,116,45,238,111,303,136,80,4707,	0,82429,139274,148339,153769,156439,159175,160457,193570,207059,211293,220612,228053,280626,336312,435861,475218,534744,588172,650304,
#Partially deleted in new
chr2	204965151	205620162	chr2:204965151-205620162	1	+	204965151	205615813	789624	20	172,110,89,87,126,359,140,129,186,171,133,100,116,45,207,238,111,136,80,4707,	0,82429,139274,148339,153769,156439,159175,160457,193570,207059,211293,220612,228053,280626,335378,336312,435861,534744,588172,650304,
#Partially deleted in new
chr2	205103691	205121688	chr2:205103691-205121688	0	+	205103691	205103691	8553170	5	78,89,87,126,98,	0,734,9799,15229,17899,
#Deleted in new
chr2	205253303	205253503	chr2:205253303-205253503	7	-	205253303	205253303	16724991	1	200,	0,
#Partially deleted in new
chr2	205293491	205301511	chr2:205293491-205301511	0	+	205293491	205293491	8553170	3	320,207,48,	0,7038,7972,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	205347808	205440471	chr2:205347808-205440471	0	+	205347808	205347808	8553170	3	363,111,102,	0,53204,92561,
#Partially deleted in new
chr2	205482589	205616062	chr2:205482589-205616062	0	+	205482589	205482589	8553170	4	149,136,80,607,	0,17306,70734,132866,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	205681989	205701557	chr2:205681989-205701557	0	+	205681989	205681989	8553170	4	229,273,178,851,	0,1101,15554,18717,
#Partially deleted in new
chr2	205682499	205798133	chr2:205682499-205798133	3	+	205683290	205795058	0	17	864,178,182,231,156,170,156,145,350,145,117,141,263,97,36,51,3380,	0,15044,33693,39978,41285,43413,45391,58019,60703,63246,67225,70335,81174,82974,84283,109735,112254,
#Partially deleted in new
chr2	205682500	205716246	chr2:205682500-205716246	0	+	205683290	205716246	789624	4	78,273,178,54,	0,590,15043,33692,
#Partially deleted in new
chr2	205682506	205743698	chr2:205682506-205743698	1	+	205683290	205743579	0	10	399,273,178,182,231,156,170,156,145,496,	0,584,15037,33686,39971,41278,43406,45384,58012,60696,
#Partially deleted in new
chr2	205682657	205697909	chr2:205682657-205697909	0	+	205682657	205682657	8553170	2	706,366,	0,14886,
#Partially deleted in new
chr2	205683259	205777156	chr2:205683259-205777156	1	+	205683290	205776526	0	16	104,178,182,231,156,170,156,145,350,145,117,141,263,97,21,911,	0,14284,32933,39218,40525,42653,44631,57259,59943,62486,66465,69575,80414,82214,83523,92986,
#Partially deleted in new
chr2	205683259	205795172	chr2:205683259-205795172	1	+	205683290	205795058	0	17	104,178,182,231,156,170,156,145,350,145,117,141,263,97,21,51,419,	0,14284,32933,39218,40525,42653,44631,57259,59943,62486,66465,69575,80414,82214,83523,108975,111494,
#Partially deleted in new
chr2	205683290	205779714	chr2:205683290-205779714	1	+	205683290	205776526	0	16	73,178,182,231,156,170,156,145,350,145,117,141,263,97,36,3469,	0,14253,32902,39187,40494,42622,44600,57228,59912,62455,66434,69544,80383,82183,83492,92955,
#Partially deleted in new
chr2	205683290	205795058	chr2:205683290-205795058	1	+	205683290	205795058	0	16	73,178,182,231,156,170,156,145,350,145,117,141,263,97,21,305,	0,14253,32902,39187,40494,42622,44600,57228,59912,62455,66434,69544,80383,82183,83492,111463,
#Partially deleted in new
chr2	205685792	205697734	chr2:205685792-205697734	0	+	205685792	205685792	8553170	2	30,191,	0,11751,
#Partially deleted in new
chr2	205722264	205723922	chr2:205722264-205723922	0	+	205722264	205722264	8553170	2	444,138,	0,1520,
#Partially deleted in new
chr2	205739935	205743693	chr2:205739935-205743693	0	+	205739935	205739935	8553170	3	51,145,491,	0,583,3267,
#Partially deleted in new
chr2	205749690	205763807	chr2:205749690-205763807	0	+	205749690	205749690	8553170	3	151,141,134,	0,3144,13983,
#Partially deleted in new
chr2	205752467	205763806	chr2:205752467-205763806	0	+	205752467	205752467	8553170	2	508,133,	0,11206,
#Partially deleted in new
chr2	205756468	205763953	chr2:205756468-205763953	0	-	205756468	205756468	8553170	2	370,164,	0,7321,
#Partially deleted in new
chr2	205756480	205763953	chr2:205756480-205763953	0	-	205756480	205756480	8553170	3	358,75,164,	0,4947,7309,
#Partially deleted in new
chr2	205756481	205763860	chr2:205756481-205763860	0	-	205756481	205756481	8553170	3	357,114,71,	0,4316,7308,
#Partially deleted in new
chr2	205756482	205763860	chr2:205756482-205763860	0	-	205756482	205756482	8553170	4	356,36,122,71,	0,4945,5905,7307,
#Partially deleted in new
chr2	205756483	205763953	chr2:205756483-205763953	0	-	205756483	205756483	8553170	3	355,36,164,	0,4944,7306,
#Partially deleted in new
chr2	205756518	205763953	chr2:205756518-205763953	0	-	205756518	205756518	8553170	3	320,122,164,	0,5869,7271,
#Partially deleted in new
chr2	205756669	205763953	chr2:205756669-205763953	0	-	205756669	205756669	8553170	4	169,75,122,164,	0,4758,5718,7120,
#Partially deleted in new
chr2	205759496	205764006	chr2:205759496-205764006	3	-	205759496	205759496	8553170	3	261,75,217,	0,1931,4293,
#Deleted in new
chr2	205760885	205763953	chr2:205760885-205763953	0	-	205760885	205760885	8553170	4	26,75,122,164,	0,542,1502,2904,
#Deleted in new
chr2	205761923	205763953	chr2:205761923-205763953	0	-	205761923	205761923	8553170	3	215,122,164,	0,464,1866,
#Deleted in new
chr2	205761935	205763860	chr2:205761935-205763860	0	-	205761935	205761935	8553170	2	203,71,	0,1854,
#Deleted in new
chr2	205761937	205763860	chr2:205761937-205763860	0	-	205761937	205761937	8553170	2	252,71,	0,1852,
#Deleted in new
chr2	205761941	205763860	chr2:205761941-205763860	0	-	205761941	205761941	8553170	3	345,122,71,	0,446,1848,
#Deleted in new
chr2	205761942	205763860	chr2:205761942-205763860	0	-	205761942	205761942	8553170	2	374,71,	0,1847,
#Deleted in new
chr2	205762020	205763947	chr2:205762020-205763947	0	-	205762020	205762020	8553170	2	367,158,	0,1769,
#Deleted in new
chr2	205763734	205768481	chr2:205763734-205768481	0	+	205763734	205763734	8553170	4	202,97,21,1253,	0,1739,3048,3494,
#Deleted in new
chr2	205763800	205767064	chr2:205763800-205767064	0	+	205763800	205763800	8553170	3	136,97,282,	0,1673,2982,
#Partially deleted in new
chr2	205764336	205795121	chr2:205764336-205795121	0	+	205764336	205764336	8553170	5	157,97,21,51,368,	0,1137,2446,27898,30417,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	205900629	205900958	chr2:205900629-205900958	3	+	205900629	205900629	8553170	1	329,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	205949090	205950145	chr2:205949090-205950145	7	+	205949090	205949090	16724991	2	363,139,	0,916,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	205989584	206000858	chr2:205989584-206000858	3	+	205989584	205989584	8553170	3	171,56,554,	0,6761,10720,
#Partially deleted in new
chr2	205993720	206086182	chr2:205993720-206086182	3	-	206004367	206063016	789624	11	11813,158,218,134,110,225,109,746,247,94,282,	0,13563,15856,23959,26015,34390,52783,62477,69078,69430,92180,
#Deleted in new
chr2	206007879	206007974	chr2:206007879-206007974	3	-	206007879	206007879	8553170	1	95,	0,
#Partially deleted in new
chr2	206009704	206063244	chr2:206009704-206063244	0	-	206009704	206056846	789624	8	90,134,110,225,109,746,156,94,	0,7975,10031,18406,36799,46493,53094,53446,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	206025592	206025697	chr2:206025592-206025697	3	+	206025592	206025592	8553170	1	105,	0,
#Partially deleted in new
chr2	206040431	206040845	chr2:206040431-206040845	7	+	206040431	206040431	16724991	1	414,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	206062905	206086303	chr2:206062905-206086303	0	-	206062905	206063016	789624	4	140,94,116,403,	0,245,663,22995,
#Deleted in new
chr2	206084604	206086564	chr2:206084604-206086564	3	+	206084604	206084604	8553170	2	144,608,	0,1352,
#Deleted in new
chr2	206085521	206086156	chr2:206085521-206086156	1	+	206085521	206085521	8553170	2	282,200,	0,435,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr2	206114816	206159603	chr2:206114816-206159603	3	-	206124184	206153678	0	19	9460,73,135,176,155,161,130,129,146,115,135,186,131,82,77,108,92,65,263,	0,11722,11893,12980,15271,18128,23668,27124,27869,29201,30075,32086,32714,32936,34203,35001,37602,38801,44524,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	206115546	206122323	chr2:206115546-206122323	3	+	206115546	206115546	8553170	2	1204,207,	0,6570,
#Partially deleted in new
chr2	206116109	206116500	chr2:206116109-206116500	7	-	206116109	206116109	16724991	1	391,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr2	206123110	206159194	chr2:206123110-206159194	1	-	206124184	206159133	0	19	1166,73,135,176,155,161,130,129,146,115,135,186,131,82,77,108,92,65,99,	0,3428,3599,4686,6977,9834,15374,18830,19575,20907,21781,23792,24420,24642,25909,26707,29308,30507,35985,
#Partially deleted in new
chr2	206123818	206159509	chr2:206123818-206159509	1	-	206124184	206149907	0	18	458,73,135,176,155,161,130,129,146,115,135,186,131,82,77,108,65,169,	0,2720,2891,3978,6269,9126,14666,18122,18867,20199,21073,23084,23712,23934,25201,25999,29799,35522,
#Partially deleted in new
chr2	206123944	206159425	chr2:206123944-206159425	1	-	206124184	206147824	789624	15	332,73,135,176,155,161,130,129,146,115,135,186,131,82,85,	0,2594,2765,3852,6143,9000,14540,17996,18741,20073,20947,22958,23586,23808,35396,
#Partially deleted in new
chr2	206123955	206159425	chr2:206123955-206159425	1	-	206124184	206153678	0	18	321,73,135,176,155,161,130,129,146,115,135,186,131,82,77,92,65,85,	0,2583,2754,3841,6132,8989,14529,17985,18730,20062,20936,22947,23575,23797,25064,28463,29662,35385,
#Partially deleted in new
chr2	206124100	206159425	chr2:206124100-206159425	1	-	206124184	206153622	0	16	176,73,135,176,155,161,130,129,146,115,135,186,131,82,65,85,	0,2438,2609,3696,5987,8844,14384,17840,18585,19917,20791,22802,23430,23652,29517,35240,
#Partially deleted in new
chr2	206124100	206159194	chr2:206124100-206159194	1	-	206124184	206153678	0	19	176,73,135,176,155,161,130,129,146,115,135,186,131,82,77,108,92,65,99,	0,2438,2609,3696,5987,8844,14384,17840,18585,19917,20791,22802,23430,23652,24919,25717,28318,29517,34995,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	206127559	206132969	chr2:206127559-206132969	0	-	206127559	206127559	8553170	3	413,155,25,	0,2528,5385,
#Partially deleted in new
chr2	206147645	206159425	chr2:206147645-206159425	0	-	206149802	206153678	789624	7	16,82,77,146,92,65,85,	0,107,1374,2134,4773,5972,11695,
#Partially deleted in new
chr2	206147781	206159257	chr2:206147781-206159257	0	-	206147781	206153678	789624	6	53,77,108,92,65,174,	0,1238,2036,4637,5836,11302,
#Partially deleted in new
chr2	206159584	206162928	chr2:206159584-206162928	3	+	206159979	206162883	0	7	100,101,123,127,67,126,200,	0,374,1003,1761,2453,2904,3144,
#Partially deleted in new
chr2	206159593	206162927	chr2:206159593-206162927	1	+	206159979	206162883	0	7	91,147,123,127,67,126,199,	0,319,994,1752,2444,2895,3135,
#Partially deleted in new
chr2	206159604	206162928	chr2:206159604-206162928	1	+	206159979	206162883	0	6	455,123,127,67,126,200,	0,983,1741,2433,2884,3124,
#Partially deleted in new
chr2	206159606	206162077	chr2:206159606-206162077	0	+	206159979	206162077	789624	5	78,147,123,127,40,	0,306,981,1739,2431,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	206159614	206161117	chr2:206159614-206161117	0	+	206159614	206159614	8553170	3	70,101,530,	0,344,973,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	206159635	206162801	chr2:206159635-206162801	0	+	206159979	206160890	789624	8	49,101,123,246,127,67,126,73,	0,323,952,1251,1710,2402,2853,3093,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	206159637	206161190	chr2:206159637-206161190	0	+	206159637	206159637	8553170	2	422,603,	0,950,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	206159926	206161467	chr2:206159926-206161467	0	+	206159979	206160890	789624	4	133,123,246,147,	0,661,960,1394,
#Partially deleted in new
chr2	206159933	206161454	chr2:206159933-206161454	0	+	206159979	206160566	789624	3	126,154,109,	0,623,1412,
#Partially deleted in new
chr2	206159933	206162839	chr2:206159933-206162839	0	+	206159979	206161359	789624	6	85,154,127,67,126,111,	0,623,1412,2104,2555,2795,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	206160842	206161024	chr2:206160842-206161024	3	+	206160842	206160842	8553170	1	182,	0,
#Partially deleted in new
chr2	206161840	206161929	chr2:206161840-206161929	3	+	206161840	206161840	8553170	1	89,	0,
#Partially deleted in new
chr2	206161877	206161957	chr2:206161877-206161957	3	+	206161877	206161877	789624	1	80,	0,
#Partially deleted in new
chr2	206162227	206162359	chr2:206162227-206162359	3	+	206162227	206162227	789624	1	132,	0,
#Partially deleted in new
chr2	206162227	206162928	chr2:206162227-206162928	0	+	206162227	206162227	8553170	2	387,200,	0,501,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	206175315	206218024	chr2:206175315-206218024	1	-	206176179	206177247	789624	3	1960,119,216,	0,37991,42493,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	206175319	206218047	chr2:206175319-206218047	3	-	206176179	206177247	789624	4	1956,119,251,239,	0,37987,42043,42489,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	206175319	206213628	chr2:206175319-206213628	1	-	206176179	206177247	789624	3	1956,119,81,	0,37987,38228,
#Partially deleted in new
chr2	206176179	206217903	chr2:206176179-206217903	1	-	206176179	206177247	789624	4	1096,115,251,95,	0,37127,41183,41629,
#Partially deleted in new
chr2	206176565	206213371	chr2:206176565-206213371	0	-	206176565	206177247	789624	3	710,55,65,	0,27328,36741,
#Partially deleted in new
chr2	206176712	206213625	chr2:206176712-206213625	0	-	206176712	206177247	789624	3	563,115,78,	0,36594,36835,
#Partially deleted in new
chr2	206176835	206213438	chr2:206176835-206213438	0	-	206176835	206177247	789624	2	440,132,	0,36471,
#Partially deleted in new
chr2	206176999	206213744	chr2:206176999-206213744	0	-	206176999	206177247	789624	3	276,119,197,	0,36307,36548,
#Partially deleted in new
chr2	206177026	206218047	chr2:206177026-206218047	0	-	206177026	206177247	789624	3	249,115,239,	0,36280,40782,
#Partially deleted in new
chr2	206177190	206217900	chr2:206177190-206217900	0	-	206177190	206177247	789624	4	85,119,251,92,	0,36116,40172,40618,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	206203375	206265326	chr2:206203375-206265326	3	+	206203375	206203375	789624	6	302,146,117,93,185,1948,	0,37067,52490,53053,56455,60003,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	206203542	206265326	chr2:206203542-206265326	0	+	206203542	206203542	8553170	6	135,146,117,93,185,1948,	0,36900,52323,52886,56288,59836,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	206203577	206263745	chr2:206203577-206263745	0	+	206203577	206203577	8553170	5	100,117,93,185,367,	0,52288,52851,56253,59801,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	206221314	206221634	chr2:206221314-206221634	3	+	206221314	206221314	8553170	1	320,	0,
#Deleted in new
chr2	206236235	206236871	chr2:206236235-206236871	7	-	206236235	206236235	16724991	1	636,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	206259409	206263477	chr2:206259409-206263477	0	+	206259409	206259409	8553170	2	606,99,	0,3969,
#Deleted in new
chr2	206259627	206259918	chr2:206259627-206259918	7	-	206259627	206259627	16724991	1	291,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	206260065	206260214	chr2:206260065-206260214	3	-	206260065	206260065	8553170	1	149,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	206274662	206314438	chr2:206274662-206314438	3	+	206281849	206311593	789624	5	284,53,109,128,9722,	0,4877,7138,22583,30054,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	206274688	206314427	chr2:206274688-206314427	1	+	206281849	206311593	789624	6	258,53,44,109,128,9711,	0,4851,5861,7112,22557,30028,
#Partially deleted in new
chr2	206274881	206305147	chr2:206274881-206305147	0	+	206281849	206305147	8553170	6	65,53,44,109,128,431,	0,4658,5668,6919,22364,29835,
#Partially deleted in new
chr2	206274992	206305858	chr2:206274992-206305858	0	+	206281849	206297289	8553170	7	188,53,44,109,106,128,1142,	0,4547,5557,6808,17018,22253,29724,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	206275009	206313300	chr2:206275009-206313300	0	+	206281849	206297289	8553170	8	70,53,44,109,103,128,2159,6254,	0,4530,5540,6791,17004,22236,29707,32037,
#Partially deleted in new
chr2	206275009	206308801	chr2:206275009-206308801	0	+	206281849	206308801	8553170	6	70,53,44,109,128,4085,	0,4530,5540,6791,22236,29707,
#Partially deleted in new
chr2	206275009	206307161	chr2:206275009-206307161	1	+	206281849	206307048	8553170	7	171,53,44,109,128,2159,115,	0,4530,5540,6791,22236,29707,32037,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	206275043	206314253	chr2:206275043-206314253	1	+	206281849	206307048	8553170	6	137,53,109,41,2159,7207,	0,4496,6757,22289,29673,32003,
#Partially deleted in new
chr2	206275713	206307044	chr2:206275713-206307044	0	+	206281849	206307044	8553170	6	278,53,44,109,128,2328,	0,3826,4836,6087,21532,29003,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	206279559	206313196	chr2:206279559-206313196	0	+	206281849	206297289	8553170	6	33,44,109,106,128,8480,	0,990,2241,12451,17686,25157,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	206292062	206314424	chr2:206292062-206314424	1	+	206292062	206311593	789624	3	54,128,9708,	0,5183,12654,
#Deleted in new
chr2	206410086	206410909	chr2:206410086-206410909	7	-	206410086	206410086	16724991	1	823,	0,
#Partially deleted in new
chr2	206419291	206420238	chr2:206419291-206420238	7	-	206419291	206419291	16724991	1	947,	0,
#Partially deleted in new
chr2	206443538	206621130	chr2:206443538-206621130	3	+	206443866	206617627	789624	26	542,218,77,64,83,64,73,74,66,72,164,85,91,49,100,72,90,81,51,64,106,120,169,112,91,3552,	0,1768,37693,87346,98513,99714,103890,104742,106556,113888,116416,117589,118664,121481,123684,127201,128188,129576,143786,144552,145870,149078,151198,152512,166371,174040,
#Partially deleted in new
chr2	206443866	206617842	chr2:206443866-206617842	1	+	206443866	206617627	789624	26	214,218,77,64,83,64,73,74,66,72,164,85,91,49,100,72,90,81,51,64,106,120,169,112,91,264,	0,1440,37365,87018,98185,99386,103562,104414,106228,113560,116088,117261,118336,121153,123356,126873,127860,129248,143458,144224,145542,148750,150870,152184,161923,173712,
#Partially deleted in new
chr2	206594834	206617855	chr2:206594834-206617855	0	+	206594834	206617718	789624	3	71,112,277,	0,1216,22744,
#Partially deleted in new
chr2	206606496	206609812	chr2:206606496-206609812	3	-	206606496	206606496	8553170	3	244,128,68,	0,582,3248,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	206640072	206641282	chr2:206640072-206641282	3	+	206640072	206640072	8553170	2	106,460,	0,750,
#Partially deleted in new
chr2	206642411	206649011	chr2:206642411-206649011	3	+	206644236	206648794	789624	3	171,422,351,	0,1815,6249,
#Partially deleted in new
chr2	206643420	206648847	chr2:206643420-206648847	0	+	206643420	206643420	8553170	2	27,187,	0,5240,
#Partially deleted in new
chr2	206651620	206718396	chr2:206651620-206718396	3	-	206651817	206718279	789624	12	301,493,160,149,112,164,72,101,86,202,75,136,	0,11282,14249,41554,43145,48106,48524,53222,54167,55681,58903,66640,
#Partially deleted in new
chr2	206651620	206718396	chr2:206651620-206718396	0	-	206651620	206651620	8553170	14	301,493,160,86,154,149,112,164,72,101,86,202,75,136,	0,11282,14249,18855,27395,41554,43145,48106,48524,53222,54167,55681,58903,66640,
#Deleted in new
chr2	206686516	206687362	chr2:206686516-206687362	7	-	206686516	206686516	16724991	1	846,	0,
#Partially deleted in new
chr2	206699726	206705791	chr2:206699726-206705791	0	-	206699726	206699726	8553170	4	164,72,190,4,	0,418,5116,6061,
#Partially deleted in new
chr2	206737762	206765547	chr2:206737762-206765547	3	-	206738482	206765271	789624	12	749,69,51,52,140,164,142,497,143,135,113,298,	0,1830,3291,7859,8524,11257,13171,17246,19135,19474,23138,27487,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	206737827	206765294	chr2:206737827-206765294	0	-	206741299	206765271	789624	10	684,69,329,52,140,164,143,135,113,45,	0,1765,3226,7794,8459,11192,19070,19409,23073,27422,
#Partially deleted in new
chr2	206738224	206765326	chr2:206738224-206765326	1	-	206738482	206757016	789624	11	287,69,51,52,140,164,142,497,143,135,77,	0,1368,2829,7397,8062,10795,12709,16784,18673,19012,27025,
#Partially deleted in new
chr2	206738256	206765286	chr2:206738256-206765286	1	-	206738482	206765271	789624	12	255,66,51,52,140,164,142,497,143,135,113,37,	0,1336,2797,7365,8030,10763,12677,16752,18641,18980,22644,26993,
#Partially deleted in new
chr2	206739592	206765307	chr2:206739592-206765307	0	-	206749180	206765271	789624	9	69,51,52,140,164,129,135,113,58,	0,1461,6029,6694,9427,17319,17644,21308,25657,
#Partially deleted in new
chr2	206756618	206765301	chr2:206756618-206765301	0	-	206756618	206756618	8553170	4	422,135,113,52,	0,618,4282,8631,
#Partially deleted in new
chr2	206765356	206792509	chr2:206765356-206792509	3	+	206766693	206791802	789624	12	298,827,104,109,124,140,173,167,219,85,115,827,	0,1287,4734,5825,6537,6824,8868,21376,22580,23462,25215,26326,
#Partially deleted in new
chr2	206765364	206767065	chr2:206765364-206767065	0	+	206766693	206767065	789624	2	154,422,	0,1279,
#Partially deleted in new
chr2	206765431	206791889	chr2:206765431-206791889	1	+	206766693	206791802	789624	12	316,827,104,109,124,140,173,167,219,85,115,207,	0,1212,4659,5750,6462,6749,8793,21301,22505,23387,25140,26251,
#Partially deleted in new
chr2	206765605	206791806	chr2:206765605-206791806	1	+	206766693	206791802	789624	12	157,827,104,109,124,140,173,167,219,85,115,124,	0,1038,4485,5576,6288,6575,8619,21127,22331,23213,24966,26077,
#Partially deleted in new
chr2	206765646	206791946	chr2:206765646-206791946	0	+	206765646	206765646	8553170	10	8,827,104,109,124,140,173,167,219,3128,	0,997,4444,5535,6247,6534,8578,21086,22290,23172,
#Deleted in new
chr2	206783233	206783308	chr2:206783233-206783308	3	+	206783233	206783233	5263520	1	75,	0,
#Deleted in new
chr2	206783233	206783308	chr2:206783233-206783308	3	-	206783233	206783233	5263520	1	75,	0,
#Partially deleted in new
chr2	206786613	206790823	chr2:206786613-206790823	0	+	206786613	206786613	8553170	4	286,219,85,252,	0,1323,2205,3958,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	206821189	206822294	chr2:206821189-206822294	3	-	206821189	206821189	8553170	1	1105,	0,
#Deleted in new
chr2	206866794	206868289	chr2:206866794-206868289	3	+	206866794	206866794	8553170	2	183,463,	0,1032,
#Partially deleted in new
chr2	206939553	206969474	chr2:206939553-206969474	3	+	206939599	206969436	0	9	114,97,102,105,111,91,203,85,301,	0,10063,15909,18747,20077,21298,22858,28709,29620,
#Partially deleted in new
chr2	207074136	207165945	chr2:207074136-207165945	3	-	207081212	207165568	789624	4	7128,124,631,479,	0,14321,49637,91330,
#Partially deleted in new
chr2	207074136	207134137	chr2:207074136-207134137	1	-	207081212	207134084	789624	4	7128,124,631,71,	0,14321,49637,59930,
#Partially deleted in new
chr2	207079089	207167246	chr2:207079089-207167246	1	-	207081212	207167142	789624	4	2175,124,631,107,	0,9368,44684,88050,
#Partially deleted in new
chr2	207080360	207166847	chr2:207080360-207166847	1	-	207081226	207165568	789624	5	904,124,429,240,91,	0,8097,43615,85106,86396,
#Partially deleted in new
chr2	207081015	207165571	chr2:207081015-207165571	1	-	207081212	207165568	789624	4	249,124,61,105,	0,7442,43328,84451,
#Partially deleted in new
chr2	207081015	207124408	chr2:207081015-207124408	0	-	207081015	207081015	8553170	3	249,124,65,	0,7442,43328,
#Deleted in new
chr2	207109986	207110073	chr2:207109986-207110073	3	-	207109986	207109986	5263520	1	87,	0,
#Deleted in new
chr2	207120883	207122044	chr2:207120883-207122044	3	-	207120883	207120883	8553170	2	113,542,	0,619,
#Partially deleted in new
chr2	207123897	207134137	chr2:207123897-207134137	0	-	207123897	207134084	789624	2	507,71,	0,10169,
#Partially deleted in new
chr2	207124168	207166186	chr2:207124168-207166186	0	-	207124168	207165568	789624	3	236,240,274,	0,41298,41744,
#Partially deleted in new
chr2	207124324	207167267	chr2:207124324-207167267	0	-	207124324	207165568	789624	3	80,240,274,	0,41142,42669,
#Partially deleted in new
chr2	207124352	207165975	chr2:207124352-207165975	0	-	207149146	207165568	789624	4	52,219,240,63,	0,24629,41114,41560,
#Deleted in new
chr2	207166399	207166498	chr2:207166399-207166498	3	+	207166399	207166399	5263520	1	99,	0,
#Partially deleted in new
chr2	207173633	207222790	chr2:207173633-207222790	3	+	207173633	207173633	8553170	5	181,104,108,120,41,	0,20495,43162,46122,49116,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	207186716	207235883	chr2:207186716-207235883	3	-	207186716	207186716	8553170	3	272,173,111,	0,48721,49056,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	207219850	207236066	chr2:207219850-207236066	1	-	207219850	207219850	8553170	4	158,198,173,294,	0,10673,15587,15922,
#Deleted in new
chr2	207226948	207228308	chr2:207226948-207228308	3	+	207226948	207226948	8553170	2	135,416,	0,944,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	207235298	207237875	chr2:207235298-207237875	3	-	207235298	207235298	8553170	2	305,56,	0,2521,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	207239649	207245588	chr2:207239649-207245588	0	+	207239649	207239649	8553170	2	506,300,	0,5639,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	207239810	207245887	chr2:207239810-207245887	3	+	207239810	207239810	789624	3	276,99,599,	0,390,5478,
#Partially deleted in new
chr2	207239863	207254252	chr2:207239863-207254252	1	-	207239863	207239863	8553170	2	475,64,	0,14325,
#Partially deleted in new
chr2	207240120	207529795	chr2:207240120-207529795	0	-	207240120	207240120	8553170	5	218,55,79,97,84,	0,92520,277499,288396,289591,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	207260444	207270690	chr2:207260444-207270690	3	+	207260444	207260444	8553170	3	123,193,207,	0,8256,10039,
#Partially deleted in new
chr2	207327889	207529791	chr2:207327889-207529791	3	-	207327889	207327889	8553170	6	286,55,144,79,97,80,	0,4751,89711,189730,200627,201822,
#Partially deleted in new
chr2	207529736	207597789	chr2:207529736-207597789	1	+	207555635	207597058	0	8	282,122,147,101,143,183,151,876,	0,25891,30489,37726,40442,45535,47768,67177,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	207529891	207603431	chr2:207529891-207603431	3	+	207555635	207597058	0	9	243,122,147,42,101,143,183,151,6518,	0,25736,30334,31227,37571,40287,45380,47613,67022,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	207529911	207603431	chr2:207529911-207603431	1	+	207555635	207597058	0	8	223,122,147,101,143,183,151,6518,	0,25716,30314,37551,40267,45360,47593,67002,
#Partially deleted in new
chr2	207529922	207570321	chr2:207529922-207570321	0	+	207555635	207570321	789624	6	96,122,147,42,101,143,	0,25705,30303,31196,37540,40256,
#Partially deleted in new
chr2	207529939	207577631	chr2:207529939-207577631	0	+	207560231	207577631	789624	5	195,147,101,143,127,	0,30286,37523,40239,47565,
#Partially deleted in new
chr2	207530071	207567710	chr2:207530071-207567710	0	+	207530071	207530071	8553170	4	63,122,147,248,	0,25556,30154,37391,
#Partially deleted in new
chr2	207530103	207567556	chr2:207530103-207567556	0	+	207555635	207567556	789624	6	31,82,122,147,42,94,	0,4498,25524,30122,31015,37359,
#Partially deleted in new
chr2	207550260	207560348	chr2:207550260-207560348	0	+	207555635	207560348	789624	3	335,122,123,	0,5367,9965,
#Partially deleted in new
chr2	207559121	207571777	chr2:207559121-207571777	0	+	207559121	207559121	8553170	5	134,147,101,143,44,	0,1104,8341,11057,12612,
#Partially deleted in new
chr2	207559170	207568150	chr2:207559170-207568150	0	+	207559170	207559170	8553170	3	85,147,688,	0,1055,8292,
#Partially deleted in new
chr2	207559187	207596949	chr2:207559187-207596949	0	+	207560231	207596949	789624	7	68,147,101,143,183,151,36,	0,1038,8275,10991,16084,18317,37726,
#Partially deleted in new
chr2	207559225	207570288	chr2:207559225-207570288	0	+	207560231	207570288	789624	5	30,147,42,101,110,	0,1000,1893,8237,10953,
#Partially deleted in new
chr2	207560313	207596949	chr2:207560313-207596949	0	+	207560313	207576647	789624	9	59,42,101,143,183,63,115,151,36,	0,805,7149,9865,14958,16317,16796,17191,36600,
#Partially deleted in new
chr2	207575285	207578065	chr2:207575285-207578065	0	+	207575285	207577758	789624	2	169,561,	0,2219,
#Partially deleted in new
chr2	207576635	207597458	chr2:207576635-207597458	0	+	207576635	207576635	8553170	3	58,151,545,	0,869,20278,
#Partially deleted in new
chr2	207580630	207625121	chr2:207580630-207625121	1	-	207581821	207624375	789624	5	368,153,112,176,60,	0,1163,41175,43598,44431,
#Partially deleted in new
chr2	207581352	207625331	chr2:207581352-207625331	1	-	207582146	207624375	0	4	808,112,176,270,	0,40453,42876,43709,
#Partially deleted in new
chr2	207581694	207625379	chr2:207581694-207625379	1	-	207582146	207624375	0	4	466,112,176,115,	0,40111,42534,43570,
#Partially deleted in new
chr2	207597164	207599182	chr2:207597164-207599182	0	+	207597164	207597164	8553170	2	162,103,	0,1915,
#Partially deleted in new
chr2	207597347	207599756	chr2:207597347-207599756	0	+	207597347	207597347	8553170	2	136,677,	0,1732,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	207609113	207613026	chr2:207609113-207613026	0	-	207609113	207609113	8553170	2	652,959,	0,2954,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	207609114	207625249	chr2:207609114-207625249	3	-	207613045	207624375	0	4	4329,112,176,188,	0,12691,15114,15947,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	207612103	207624983	chr2:207612103-207624983	1	-	207613045	207624375	0	4	1340,112,176,142,	0,9702,12125,12738,
#Partially deleted in new
chr2	207612722	207624551	chr2:207612722-207624551	1	-	207613045	207624375	789624	4	721,54,112,323,	0,7918,9083,11506,
#Partially deleted in new
chr2	207612726	207624380	chr2:207612726-207624380	1	-	207613431	207624375	789624	2	717,152,	0,11502,
#Partially deleted in new
chr2	207612742	207625378	chr2:207612742-207625378	1	-	207613045	207624375	0	4	701,112,176,114,	0,9063,11486,12522,
#Partially deleted in new
chr2	207612842	207624566	chr2:207612842-207624566	1	-	207613045	207624375	0	3	601,112,338,	0,8963,11386,
#Partially deleted in new
chr2	207612979	207625927	chr2:207612979-207625927	1	-	207613045	207624375	0	4	464,112,176,251,	0,8826,11249,12697,
#Partially deleted in new
chr2	207620733	207625262	chr2:207620733-207625262	0	-	207620733	207620733	8553170	4	57,112,176,201,	0,1072,3495,4328,
#Partially deleted in new
chr2	207654780	207654951	chr2:207654780-207654951	7	+	207654780	207654780	16724991	1	171,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	207662374	207667024	chr2:207662374-207667024	3	+	207662374	207662374	789624	2	148,344,	0,4306,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	207680532	207680639	chr2:207680532-207680639	3	-	207680532	207680532	8553170	1	107,	0,
#Deleted in new
chr2	207681589	207682033	chr2:207681589-207682033	7	+	207681589	207681589	16724991	1	444,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	207687959	207688059	chr2:207687959-207688059	3	+	207687959	207687959	8553170	1	100,	0,
#Partially deleted in new
chr2	207711539	207754465	chr2:207711539-207754465	3	+	207712106	207753698	789624	11	146,179,75,35,101,36,52,120,167,163,878,	0,398,13260,15302,22407,25871,29115,30683,35507,39417,42048,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	207711647	207714824	chr2:207711647-207714824	1	+	207711896	207714427	789624	2	469,483,	0,2694,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	207711685	207756174	chr2:207711685-207756174	1	+	207711896	207753698	789624	10	431,75,35,101,36,52,120,167,163,2587,	0,13114,15156,22261,25725,28969,30537,35361,39271,41902,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	207711750	207755244	chr2:207711750-207755244	1	+	207711896	207753698	789624	8	366,75,35,36,120,167,163,1657,	0,13049,15091,25660,30472,35296,39206,41837,
#Partially deleted in new
chr2	207712099	207751114	chr2:207712099-207751114	0	+	207712099	207742316	789624	8	17,75,35,101,36,120,167,158,	0,12700,14742,21847,25311,30123,34947,38857,
#Partially deleted in new
chr2	207742273	207761839	chr2:207742273-207761839	0	+	207742273	207761681	789624	4	69,167,163,203,	0,4773,8683,19363,
#Partially deleted in new
chr2	207750684	207753875	chr2:207750684-207753875	0	+	207750684	207750684	8553170	3	108,163,288,	0,272,2903,
#Deleted in new
chr2	207753871	207754435	chr2:207753871-207754435	3	-	207753871	207753871	8553170	1	564,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	207754806	207754881	chr2:207754806-207754881	3	+	207754806	207754806	5263520	1	75,	0,
#Deleted in new
chr2	207762585	207769563	chr2:207762585-207769563	3	-	207766981	207768739	0	2	6409,299,	0,6679,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	207821287	208025560	chr2:207821287-208025560	3	-	207828318	208001639	789624	8	7209,158,64,194,146,936,928,172,	0,39817,87226,109638,125079,155363,179742,204101,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	207821289	207822769	chr2:207821289-207822769	0	-	207821289	207821289	8553170	2	577,685,	0,795,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	207851237	207977450	chr2:207851237-207977450	0	-	207852789	207977450	789624	7	500,53,158,64,194,146,800,	0,1545,9867,57276,79688,95129,125413,
#Deleted in new
chr2	207868581	207869915	chr2:207868581-207869915	3	-	207868581	207868581	8553170	2	361,108,	0,1226,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	207900040	208025498	chr2:207900040-208025498	1	-	207901282	208001639	789624	8	1267,64,44,194,146,936,928,110,	0,8473,29856,30885,46326,76610,100989,125348,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	208019637	208019741	chr2:208019637-208019741	3	-	208019637	208019637	8553170	1	104,	0,
#Deleted in new
chr2	208031382	208031953	chr2:208031382-208031953	7	-	208031382	208031382	16724991	1	571,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	208054160	208054258	chr2:208054160-208054258	7	-	208054160	208054160	16724991	1	98,	0,
#Deleted in new
chr2	208057247	208057745	chr2:208057247-208057745	7	-	208057247	208057247	16724991	1	498,	0,
#Partially deleted in new
chr2	208108232	208112511	chr2:208108232-208112511	7	-	208108232	208108232	16724991	2	282,246,	0,4033,
#Partially deleted in new
chr2	208108316	208112508	chr2:208108316-208112508	4	-	208108316	208108316	16724991	2	180,243,	0,3949,
#Partially deleted in new
chr2	208121606	208124501	chr2:208121606-208124501	3	-	208121672	208124473	0	3	339,243,37,	0,2505,2858,
#Deleted in new
chr2	208128136	208129830	chr2:208128136-208129830	3	-	208128202	208129792	0	3	339,243,47,	0,1304,1647,
#Deleted in new
chr2	208135393	208137697	chr2:208135393-208137697	7	-	208135393	208135393	16724991	2	527,551,	0,1753,
#Partially deleted in new
chr2	208142572	208146168	chr2:208142572-208146168	3	-	208142637	208146120	0	3	341,243,57,	0,3201,3539,
#Partially deleted in new
chr2	208160739	208163576	chr2:208160739-208163576	3	-	208160803	208163556	0	3	337,243,29,	0,2464,2808,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	208165342	208181286	chr2:208165342-208181286	0	-	208165738	208181286	789624	5	473,114,88,72,69,	0,3039,6645,15402,15875,
#Partially deleted in new
chr2	208165346	208190073	chr2:208165346-208190073	3	-	208165806	208186986	789624	9	469,119,88,72,88,83,82,116,121,	0,5598,6641,15398,15871,17618,19604,21599,24606,
#Partially deleted in new
chr2	208165354	208190024	chr2:208165354-208190024	1	-	208165806	208190022	789624	7	461,119,88,72,88,83,68,	0,5590,6633,15390,15863,17610,24602,
#Partially deleted in new
chr2	208165375	208183024	chr2:208165375-208183024	0	-	208165738	208183024	789624	5	440,88,72,88,60,	0,6612,15369,15842,17589,
#Partially deleted in new
chr2	208165477	208187004	chr2:208165477-208187004	1	-	208165806	208186986	789624	6	338,72,88,83,82,59,	0,15267,15740,17487,19473,21468,
#Partially deleted in new
chr2	208171005	208187016	chr2:208171005-208187016	0	-	208171005	208181250	789624	6	58,88,72,88,83,71,	0,982,9739,10212,11959,15940,
#Partially deleted in new
chr2	208182971	208189985	chr2:208182971-208189985	0	-	208182971	208186986	789624	4	76,82,116,112,	0,1979,3974,6902,
#Partially deleted in new
chr2	208208134	208208984	chr2:208208134-208208984	7	+	208208134	208208134	16724991	1	850,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	208214723	208222625	chr2:208214723-208222625	7	-	208214723	208214723	16724991	2	39,464,	0,7438,
#Partially deleted in new
chr2	208236226	208255133	chr2:208236226-208255133	3	-	208237078	208251551	0	10	943,163,141,152,178,106,292,138,74,195,	0,2844,3636,5767,7200,9092,12142,15203,17659,18712,
#Partially deleted in new
chr2	208236231	208254458	chr2:208236231-208254458	1	-	208237078	208251551	0	10	938,163,141,152,178,106,292,138,74,116,	0,2839,3631,5762,7195,9087,12137,15198,17654,18111,
#Partially deleted in new
chr2	208236264	208254322	chr2:208236264-208254322	1	-	208237078	208251551	0	10	905,163,141,152,178,106,292,138,74,292,	0,2806,3598,5729,7162,9054,12104,15165,17621,17766,
#Partially deleted in new
chr2	208236741	208240315	chr2:208236741-208240315	0	-	208236741	208236741	8553170	3	428,163,453,	0,2329,3121,
#Partially deleted in new
chr2	208245366	208254339	chr2:208245366-208254339	0	-	208245366	208251551	789624	4	58,292,138,454,	0,3002,6063,8519,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	208247381	208255061	chr2:208247381-208255061	0	-	208247381	208247381	8553170	4	1279,138,74,123,	0,4048,6504,7557,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	208248561	208255798	chr2:208248561-208255798	0	-	208248561	208251551	789624	5	99,138,74,121,270,	0,2868,5324,6377,6967,
#Partially deleted in new
chr2	208248596	208266074	chr2:208248596-208266074	0	-	208248596	208251551	789624	6	64,138,74,121,61,105,	0,2833,5289,6342,6932,17373,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	208251260	208255113	chr2:208251260-208255113	0	-	208251260	208251260	8553170	3	307,74,175,	0,2625,3678,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	208255246	208256181	chr2:208255246-208256181	0	+	208255246	208255246	789624	2	185,279,	0,656,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	208255399	208256168	chr2:208255399-208256168	3	+	208255399	208255399	8553170	2	223,266,	0,503,
#Boundary problem: need 42, got 0, diff 42, mapped 0.0
chr2	208266266	208358751	chr2:208266266-208358751	3	+	208271519	208355305	789624	42	149,181,150,119,172,208,90,139,158,112,148,168,60,130,181,75,108,141,127,1160,101,72,172,179,114,109,155,91,61,138,121,96,84,98,165,60,177,104,129,262,75,3562,	0,5244,7317,10445,11270,19459,22462,32374,34670,35975,37904,38579,45969,48027,48926,51600,53985,57875,58644,59003,61913,63575,64256,67048,69039,69526,69779,70571,72241,73151,73744,76287,78844,79783,81592,83757,84504,85085,86387,87631,88304,88923,
#Partially deleted in new
chr2	208266266	208305549	chr2:208266266-208305549	1	+	208271519	208305024	789624	10	149,181,150,208,90,139,158,112,148,704,	0,5244,7317,19459,22462,32374,34670,35975,37904,38579,
#Partially deleted in new
chr2	208266266	208326107	chr2:208266266-208326107	0	+	208271519	208285761	789624	19	149,181,150,119,208,90,139,158,112,148,168,60,130,181,75,108,141,127,838,	0,5244,7317,10445,19459,22462,32374,34670,35975,37904,38579,45969,48027,48926,51600,53985,57875,58644,59003,
#Partially deleted in new
chr2	208266277	208305128	chr2:208266277-208305128	1	+	208271519	208305024	789624	11	138,181,150,33,208,90,139,158,112,148,283,	0,5233,7306,7743,19448,22451,32363,34659,35964,37893,38568,
#Partially deleted in new
chr2	208266277	208305128	chr2:208266277-208305128	1	+	208271519	208305024	789624	12	138,181,150,119,172,208,90,139,158,112,148,283,	0,5233,7306,10434,11259,19448,22451,32363,34659,35964,37893,38568,
#Partially deleted in new
chr2	208266356	208285800	chr2:208266356-208285800	0	+	208271519	208285800	789624	7	59,181,150,36,119,172,75,	0,5154,7227,7661,10355,11180,19369,
#Partially deleted in new
chr2	208266362	208335856	chr2:208266362-208335856	0	+	208271519	208335856	789624	25	53,181,150,119,172,208,90,139,158,112,148,60,130,181,75,108,141,127,1160,101,72,172,179,114,64,	0,5148,7221,10349,11174,19363,22366,32278,34574,35879,37808,45873,47931,48830,51504,53889,57779,58548,58907,61817,63479,64160,66952,68943,69430,
#Deleted in new
chr2	208269342	208269957	chr2:208269342-208269957	7	-	208269342	208269342	16724991	1	615,	0,
#Partially deleted in new
chr2	208298640	208302580	chr2:208298640-208302580	0	+	208298640	208298640	8553170	3	139,158,339,	0,2296,3601,
#Deleted in new
chr2	208334371	208336865	chr2:208334371-208336865	0	+	208334371	208334371	8553170	5	132,114,109,155,28,	0,934,1421,1674,2466,
#Partially deleted in new
chr2	208359713	208494029	chr2:208359713-208494029	1	+	208437803	208493659	789624	13	524,103,111,122,98,190,154,61,67,95,139,42,766,	0,68487,77823,78046,82650,83634,85020,91035,100181,121356,129298,130925,133550,
#Deleted in new
chr2	208360630	208361369	chr2:208360630-208361369	7	-	208360630	208360630	16724991	1	739,	0,
#Partially deleted in new
chr2	208406830	208494506	chr2:208406830-208494506	3	+	208407043	208493659	789624	13	288,103,111,122,98,190,154,61,67,95,139,42,1243,	0,21370,30706,30929,35533,36517,37903,43918,53064,74239,82181,83808,86433,
#Deleted in new
chr2	208466237	208466626	chr2:208466237-208466626	7	-	208466237	208466237	16724991	1	389,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	208469849	208540413	chr2:208469849-208540413	3	+	208469849	208469849	8553170	3	103,112,305,	0,69751,70259,
#Partially deleted in new
chr2	208489085	208840100	chr2:208489085-208840100	0	+	208489085	208572069	789624	7	65,42,155,164,114,156,115,	0,1553,82927,167740,320366,335109,350900,
#Deleted in new
chr2	208516907	208517230	chr2:208516907-208517230	7	+	208516907	208516907	16724991	1	323,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	208920546	208920664	chr2:208920546-208920664	7	-	208920546	208920546	16724991	1	118,	0,
#Deleted in new
chr2	209072596	209074148	chr2:209072596-209074148	7	-	209072596	209072596	16724991	1	1552,	0,
#Partially deleted in new
chr2	209145240	209147687	chr2:209145240-209147687	7	+	209145240	209145240	16724991	2	361,272,	0,2175,
#Partially deleted in new
chr2	209178803	209182018	chr2:209178803-209182018	7	+	209178803	209178803	16724991	2	177,150,	0,3065,
#Partially deleted in new
chr2	209178965	209181123	chr2:209178965-209181123	7	+	209178965	209178965	16724991	1	2158,	0,
#Partially deleted in new
chr2	209424057	209730518	chr2:209424057-209730518	1	+	209653170	209730397	789624	15	219,50,65,77,291,114,78,62,171,148,341,93,82,113,337,	0,83534,155978,200995,229084,254514,256692,276219,280392,281522,285856,299537,301651,305792,306124,
#Partially deleted in new
chr2	209579314	209678628	chr2:209579314-209678628	0	+	209653170	209678628	789624	5	124,65,77,291,57,	0,721,45738,73827,99257,
#Partially deleted in new
chr2	209579420	209734118	chr2:209579420-209734118	3	+	209653170	209730397	789624	15	335,65,77,291,114,78,3726,207,135,62,148,341,82,113,3937,	0,615,45632,73721,99151,101329,113204,117121,117496,120856,126159,130493,146288,150429,150761,
#Partially deleted in new
chr2	209579430	209730523	chr2:209579430-209730523	1	+	209653170	209730397	789624	12	325,65,77,291,114,78,62,148,341,82,113,342,	0,605,45622,73711,99141,101319,120846,126149,130483,146278,150419,150751,
#Partially deleted in new
chr2	209579608	209693625	chr2:209579608-209693625	0	+	209653170	209693625	789624	8	147,65,77,291,114,78,246,1001,	0,427,45444,73533,98963,101141,110994,113016,
#Partially deleted in new
chr2	209580040	209734118	chr2:209580040-209734118	1	+	209653170	209730397	789624	11	60,77,291,114,78,62,148,341,82,113,3937,	0,45012,73101,98531,100709,120236,125539,129873,145668,149809,150141,
#Partially deleted in new
chr2	209653170	209730397	chr2:209653170-209730397	1	+	209653170	209730397	789624	12	262,114,78,3714,207,135,62,148,341,82,113,216,	0,25401,27579,39466,43371,43746,47106,52409,56743,72538,76679,77011,
#Partially deleted in new
chr2	209653392	209705690	chr2:209653392-209705690	0	+	209653392	209705690	789624	7	40,114,78,62,48,171,111,	0,25179,27357,46884,50594,51057,52187,
#Partially deleted in new
chr2	209661464	209710264	chr2:209661464-209710264	0	+	209661464	209661464	8553170	6	214,114,78,62,148,351,	0,17107,19285,38812,44115,48449,
#Partially deleted in new
chr2	209661514	209696748	chr2:209661514-209696748	0	+	209661514	209661514	8553170	4	164,114,78,207,	0,17057,19235,35027,
#Deleted in new
chr2	209684632	209693162	chr2:209684632-209693162	0	+	209684632	209684632	8553170	2	29,526,	0,8004,
#Deleted in new
chr2	209690602	209692792	chr2:209690602-209692792	0	+	209690602	209690602	8553170	2	246,168,	0,2022,
#Partially deleted in new
chr2	209696313	209729868	chr2:209696313-209729868	0	+	209696313	209696313	8553170	8	37,207,62,148,341,93,82,19,	0,228,3963,9266,13600,27281,29395,33536,
#Deleted in new
chr2	209705381	209710161	chr2:209705381-209710161	0	+	209705381	209705381	8553170	2	346,248,	0,4532,
#Deleted in new
chr2	209705579	209710579	chr2:209705579-209710579	0	+	209705579	209705579	8553170	2	148,666,	0,4334,
#Deleted in new
chr2	209709953	209710812	chr2:209709953-209710812	0	+	209709953	209709953	8553170	2	301,149,	0,710,
#Deleted in new
chr2	209721912	209722021	chr2:209721912-209722021	7	-	209721912	209721912	16724991	1	109,	0,
#Partially deleted in new
chr2	209771992	209999300	chr2:209771992-209999300	1	+	209772072	209995595	789624	64	172,49,157,302,124,74,140,262,135,217,141,269,369,147,148,149,167,99,215,107,97,173,213,136,134,166,101,201,108,139,182,132,187,132,144,101,87,184,95,90,102,181,269,135,139,97,171,93,36,219,201,124,126,124,207,185,166,180,139,57,82,112,200,3972,	0,1101,3896,5265,14073,17539,21727,41587,43264,44916,45819,47000,48318,53914,57239,59450,62009,62919,67229,68549,70357,77458,100765,105961,108968,116102,124320,132772,140567,141809,145784,146539,149507,150259,154850,157878,158975,161829,163721,164851,165536,167479,169228,171387,173058,173854,182107,185651,187126,187496,195444,197775,198839,200208,201071,204126,204920,206536,210186,212863,220173,221322,222072,223336,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	209771992	209796547	chr2:209771992-209796547	0	+	209771992	209771992	8553170	8	172,49,157,302,124,74,140,1753,	0,1101,3896,5265,14073,17539,21727,22802,
#Partially deleted in new
chr2	209772038	209999296	chr2:209772038-209999296	3	+	209772072	209995595	789624	63	126,49,157,302,124,74,140,262,135,217,141,269,369,132,148,149,167,99,215,107,97,173,213,136,134,166,101,201,108,139,182,132,187,132,144,101,87,184,95,90,102,181,269,135,139,97,171,93,36,219,201,124,126,124,207,185,166,180,139,82,112,200,3968,	0,1055,3850,5219,14027,17493,21681,41541,43218,44870,45773,46954,48272,53868,57193,59404,61963,62873,67183,68503,70311,77412,100719,105915,108922,116056,124274,132726,140521,141763,145738,146493,149461,150213,154804,157832,158929,161783,163675,164805,165490,167433,169182,171341,173012,173808,182061,185605,187080,187450,195398,197729,198793,200162,201025,204080,204874,206490,210140,220127,221276,222026,223290,
#Deleted in new
chr2	209808803	209809580	chr2:209808803-209809580	7	+	209808803	209808803	16724991	1	777,	0,
#Partially deleted in new
chr2	209829228	209970314	chr2:209829228-209970314	0	+	209829228	209829228	8553170	37	151,149,167,99,215,107,97,173,213,136,134,166,101,201,108,139,182,132,187,132,144,101,87,184,95,90,102,181,269,135,139,97,171,93,36,219,2878,	0,2214,4773,5683,9993,11313,13121,20222,43529,48725,51732,58866,67084,75536,83331,84573,88548,89303,92271,93023,97614,100642,101739,104593,106485,107615,108300,110243,111992,114151,115822,116618,124871,128415,129890,130260,138208,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	209845104	209872874	chr2:209845104-209872874	0	+	209845104	209845104	8553170	4	130,173,130,117,	0,4346,24000,27653,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	209959522	209982933	chr2:209959522-209982933	0	+	209959522	209982321	789624	10	185,201,124,126,124,207,185,166,180,755,	0,7914,10245,11309,12678,13541,16596,17390,19006,22656,
#Partially deleted in new
chr2	209960930	209995813	chr2:209960930-209995813	0	+	209960930	209960930	8553170	15	96,259,201,124,126,124,207,185,166,180,139,82,112,200,485,	0,235,6506,8837,9901,11270,12133,15188,15982,17598,21248,31235,32384,33134,34398,
#Partially deleted in new
chr2	210002564	210022259	chr2:210002564-210022259	1	+	210002661	210019791	0	5	219,80,140,135,2591,	0,7092,13408,13942,17104,
#Partially deleted in new
chr2	210002564	210021576	chr2:210002564-210021576	3	+	210002661	210019791	0	6	219,80,140,135,87,1908,	0,7092,13408,13942,14908,17104,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	210002583	210020100	chr2:210002583-210020100	1	+	210015974	210019791	0	7	200,80,140,54,135,87,432,	0,7073,13389,13620,13923,14889,17085,
#Partially deleted in new
chr2	210002623	210019785	chr2:210002623-210019785	0	+	210015974	210019785	789624	6	160,98,140,135,87,117,	0,7015,13349,13883,14849,17045,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	210002627	210021576	chr2:210002627-210021576	1	+	210015974	210019791	0	7	156,31,140,54,135,87,1908,	0,810,13345,13576,13879,14845,17041,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	210002627	210021226	chr2:210002627-210021226	1	+	210015974	210019791	0	6	156,140,54,135,87,1558,	0,13345,13576,13879,14845,17041,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	210002633	210016597	chr2:210002633-210016597	0	+	210015974	210016597	789624	6	150,31,80,140,54,91,	0,804,7023,13339,13570,13873,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	210002638	210017816	chr2:210002638-210017816	0	+	210015974	210017816	789624	7	145,80,140,54,135,87,27,	0,7018,13334,13565,13868,14834,15151,
#Partially deleted in new
chr2	210002641	210019940	chr2:210002641-210019940	1	+	210015974	210018218	789624	7	142,80,140,135,87,69,272,	0,7015,13331,13865,14831,15511,17027,
#Partially deleted in new
chr2	210002642	210019961	chr2:210002642-210019961	1	+	210015974	210019791	0	5	141,140,135,87,293,	0,13330,13864,14830,17026,
#Partially deleted in new
chr2	210002642	210017521	chr2:210002642-210017521	0	+	210015974	210017521	789624	5	141,31,140,135,49,	0,795,13330,13864,14830,
#Partially deleted in new
chr2	210002649	210016558	chr2:210002649-210016558	0	+	210002661	210009697	789624	5	123,31,80,140,52,	0,788,7007,13323,13857,
#Partially deleted in new
chr2	210002655	210019961	chr2:210002655-210019961	1	+	210015974	210019791	0	6	117,20,140,135,87,293,	0,782,13317,13851,14817,17013,
#Partially deleted in new
chr2	210002656	210019961	chr2:210002656-210019961	1	+	210002661	210019684	789624	6	127,80,140,135,87,289,	0,7000,13316,13850,14816,17016,
#Partially deleted in new
chr2	210021422	210171383	chr2:210021422-210171383	3	-	210022948	210154582	789624	15	1757,169,113,55,125,116,126,108,166,205,122,198,142,1117,235,	0,2610,3681,5873,7422,8380,9998,18997,22516,54129,76663,82681,107608,132072,149726,
#Partially deleted in new
chr2	210022432	210171327	chr2:210022432-210171327	1	-	210022948	210154582	789624	14	747,169,113,55,125,116,108,166,205,122,198,142,1117,179,	0,1600,2671,4863,6412,7370,17987,21506,53119,75653,81671,106598,131062,148716,
#Partially deleted in new
chr2	210023121	210029806	chr2:210023121-210029806	0	-	210025212	210029806	789624	7	58,169,113,23,55,125,4,	0,911,1982,3258,4174,5723,6681,
#Deleted in new
chr2	210028416	210029156	chr2:210028416-210029156	3	+	210028416	210028416	8553170	1	740,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	210030732	210064356	chr2:210030732-210064356	3	+	210030732	210030732	8553170	4	775,762,89,573,	0,1430,4423,33051,
#Partially deleted in new
chr2	210040322	210171327	chr2:210040322-210171327	1	-	210040330	210154582	789624	8	205,166,205,122,198,142,1117,179,	0,3616,35229,57763,63781,88708,113172,130826,
#Partially deleted in new
chr2	210043432	210153665	chr2:210043432-210153665	0	-	210043912	210153665	789624	6	672,205,122,198,142,171,	0,32119,54653,60671,85598,110062,
#Partially deleted in new
chr2	210079804	210104195	chr2:210079804-210104195	0	-	210079804	210079804	8553170	4	94,64,122,92,	0,472,18281,24299,
#Partially deleted in new
chr2	210088225	210089064	chr2:210088225-210089064	7	+	210088225	210088225	16724991	1	839,	0,
#Partially deleted in new
chr2	210097848	210153603	chr2:210097848-210153603	0	-	210098081	210153603	789624	4	359,198,142,109,	0,6255,31182,55646,
#Partially deleted in new
chr2	210104019	210153738	chr2:210104019-210153738	0	-	210104088	210153738	789624	3	282,142,244,	0,25011,49475,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	210151404	210170654	chr2:210151404-210170654	0	-	210151404	210151404	8553170	2	3207,433,	0,18817,
#Partially deleted in new
chr2	210154182	210170594	chr2:210154182-210170594	0	-	210154182	210154182	8553170	2	429,258,	0,16154,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	210171517	210230383	chr2:210171517-210230383	0	+	210171517	210171517	8553170	3	312,93,101,	0,46954,58765,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	210171685	210233966	chr2:210171685-210233966	3	+	210171685	210171685	8553170	2	144,3684,	0,58597,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	210187938	210225491	chr2:210187938-210225491	3	-	210188960	210225263	789624	11	1116,87,128,114,102,165,67,165,138,156,305,	0,4865,7272,15392,16642,17693,22257,28408,30026,32708,37248,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	210209588	210216719	chr2:210209588-210216719	0	-	210209588	210209588	8553170	2	674,373,	0,6758,
#Partially deleted in new
chr2	210217474	210225447	chr2:210217474-210225447	0	-	210217474	210217474	8553170	3	628,156,261,	0,3172,7712,
#Partially deleted in new
chr2	210218064	210224849	chr2:210218064-210224849	0	-	210218064	210218064	8553170	3	38,156,535,	0,2582,6250,
#Partially deleted in new
chr2	210225259	210231262	chr2:210225259-210231262	0	+	210225259	210225259	8553170	2	362,980,	0,5023,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	210232691	210233976	chr2:210232691-210233976	0	+	210232691	210232691	8553170	1	1285,	0,
#Deleted in new
chr2	210265962	210266074	chr2:210265962-210266074	3	+	210265962	210265962	8553170	1	112,	0,
#Partially deleted in new
chr2	210290149	210303629	chr2:210290149-210303629	3	-	210291045	210303544	789624	7	318,43,78,174,144,25,88,	0,882,3573,4095,8270,12618,13392,
#Partially deleted in new
chr2	210290149	210315190	chr2:210290149-210315190	1	-	210291045	210315042	789624	7	318,43,78,174,144,28,280,	0,882,3573,4095,8270,12338,24761,
#Partially deleted in new
chr2	210291031	210303615	chr2:210291031-210303615	0	-	210291031	210291031	8553170	6	43,78,174,144,189,74,	0,2691,3213,7388,11736,12510,
#Partially deleted in new
chr2	210293722	210303615	chr2:210293722-210303615	0	-	210293722	210293722	8553170	6	78,174,144,28,189,74,	0,522,4697,8765,9045,9819,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	210324758	210460882	chr2:210324758-210460882	1	+	210324758	210324758	8553170	5	76,175,118,87,408,	0,102990,103281,104606,135716,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	210324765	210468694	chr2:210324765-210468694	3	+	210324765	210324765	789624	6	69,87,158,69,80,13,	0,104599,117776,135709,143739,143916,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	210431248	210476757	chr2:210431248-210476757	1	-	210434486	210476396	0	10	3315,73,177,183,147,136,208,118,97,49,	0,4138,4967,6441,9349,10059,23858,40710,45067,45460,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	210431248	210476739	chr2:210431248-210476739	1	-	210434486	210476396	0	9	3315,73,177,183,147,136,208,118,424,	0,4138,4967,6441,9349,10059,23858,40710,45067,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	210431248	210476767	chr2:210431248-210476767	3	-	210434486	210476396	0	10	3315,73,177,183,147,136,208,118,97,148,	0,4138,4967,6441,9349,10059,23858,40710,45067,45371,
#Partially deleted in new
chr2	210434114	210476705	chr2:210434114-210476705	1	-	210434486	210476396	0	10	449,73,177,183,147,136,208,118,97,59,	0,1272,2101,3575,6483,7193,20992,37844,42201,42532,
#Partially deleted in new
chr2	210434486	210476775	chr2:210434486-210476775	1	-	210434486	210476396	0	10	77,73,177,183,147,136,208,118,97,54,	0,900,1729,3203,6111,6821,20620,37472,41829,42235,
#Partially deleted in new
chr2	210434520	210440745	chr2:210434520-210440745	0	-	210434520	210440745	789624	4	43,73,177,148,	0,866,1695,6077,
#Partially deleted in new
chr2	210440698	210477652	chr2:210440698-210477652	0	-	210440698	210476396	789624	6	46,136,208,118,97,203,	0,609,14408,31260,35617,36751,
#Partially deleted in new
chr2	210455258	210476705	chr2:210455258-210476705	0	-	210471595	210476396	789624	6	56,94,139,118,97,86,	0,12889,16248,16700,21057,21361,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	210460474	210469246	chr2:210460474-210469246	1	+	210460474	210460474	8553170	3	69,80,565,	0,8030,8207,
#Partially deleted in new
chr2	210477681	210576474	chr2:210477681-210576474	0	+	210556733	210576474	789624	5	85,234,141,110,129,	0,41869,79037,95616,98664,
#Partially deleted in new
chr2	210477681	210576474	chr2:210477681-210576474	0	+	210556733	210576474	789624	5	85,120,141,110,129,	0,41869,79037,95616,98664,
#Partially deleted in new
chr2	210477689	210577493	chr2:210477689-210577493	0	+	210477763	210577493	789624	5	77,141,110,145,73,	0,79029,95608,98656,99731,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr2	210477708	210679107	chr2:210477708-210679107	1	+	210477763	210677985	0	39	58,141,110,145,90,57,93,90,129,107,139,78,99,96,190,158,129,145,211,199,177,119,142,66,64,182,195,68,76,78,108,90,171,75,99,60,113,130,1221,	0,79010,95589,98637,99712,102005,104908,110349,112397,113091,114122,115170,116799,117778,121663,122846,124493,127393,129022,130652,134408,138714,159993,161441,162287,164775,170154,170764,172654,176316,178816,180890,182776,185414,190477,197193,198019,199298,200178,
#Boundary problem: need 38, got 0, diff 38, mapped 0.0
chr2	210556537	210679107	chr2:210556537-210679107	3	+	210556733	210677985	0	38	322,110,145,90,57,93,90,129,107,139,78,99,96,190,158,129,145,211,199,177,119,142,66,64,182,195,68,76,78,108,90,171,75,99,60,113,130,1221,	0,16760,19808,20883,23176,26079,31520,33568,34262,35293,36341,37970,38949,42834,44017,45664,48564,50193,51823,55579,59885,81164,82612,83458,85946,91325,91935,93825,97487,99987,102061,103947,106585,111648,118364,119190,120469,121349,
#Partially deleted in new
chr2	210556733	210599555	chr2:210556733-210599555	1	+	210556733	210599555	789624	15	126,110,145,90,57,93,90,129,107,139,78,99,96,168,15,	0,16564,19612,20687,22980,25883,31324,33372,34066,35097,36145,37774,38753,42638,42807,
#Partially deleted in new
chr2	210577154	210579800	chr2:210577154-210579800	0	+	210577154	210577154	8553170	2	356,87,	0,2559,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr2	210593365	210679107	chr2:210593365-210679107	1	+	210595576	210677985	0	28	309,99,96,190,158,129,145,211,199,177,119,142,66,64,182,195,68,76,78,108,90,171,75,99,60,113,130,1221,	0,1142,2121,6006,7189,8836,11736,13365,14995,18751,23057,44336,45784,46630,49118,54497,55107,56997,60659,63159,65233,67119,69757,74820,81536,82362,83641,84521,
#Deleted in new
chr2	210604964	210606771	chr2:210604964-210606771	0	+	210604964	210604964	8553170	2	282,41,	0,1766,
#Partially deleted in new
chr2	210617570	210619876	chr2:210617570-210619876	3	+	210617570	210617570	789624	1	2306,	0,
#Partially deleted in new
chr2	210631227	210647934	chr2:210631227-210647934	0	+	210631227	210631227	8553170	6	59,142,66,64,182,72,	0,6474,7922,8768,11256,16635,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	210657359	210678997	chr2:210657359-210678997	0	+	210657359	210657359	8553170	10	296,35,90,171,75,99,60,113,130,1111,	0,834,1239,3125,5763,10826,17542,18368,19647,20527,
#Partially deleted in new
chr2	210658382	210663146	chr2:210658382-210663146	0	+	210658382	210658382	8553170	3	306,171,24,	0,2102,4740,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	210671614	210679107	chr2:210671614-210679107	0	+	210671614	210671614	8553170	4	3347,113,130,1221,	0,4113,5392,6272,
#Deleted in new
chr2	211104933	211105732	chr2:211104933-211105732	7	+	211104933	211104933	16724991	1	799,	0,
#Deleted in new
chr2	211298940	211299189	chr2:211298940-211299189	7	-	211298940	211298940	16724991	1	249,	0,
#Partially deleted in new
chr2	211375716	212538841	chr2:211375716-212538841	3	-	211383614	212538530	0	28	8344,298,48,171,98,147,76,156,186,99,123,133,75,155,94,133,200,91,74,127,114,142,119,66,135,187,152,393,	0,11136,12228,44724,46290,48438,52691,55228,186186,243460,248205,254745,282037,289606,297447,303335,326250,328387,329601,336333,337818,346676,349359,374922,412308,571713,749035,1162732,
#Partially deleted in new
chr2	211375716	212124907	chr2:211375716-212124907	1	-	211383614	212124907	789624	26	8344,298,171,98,147,76,156,186,99,123,133,75,155,94,133,200,91,74,127,114,142,119,66,135,187,156,	0,11136,44724,46290,48438,52691,55228,186186,243460,248205,254745,282037,289606,297447,303335,326250,328387,329601,336333,337818,346676,349359,374922,412308,571713,749035,
#Partially deleted in new
chr2	211375720	212538841	chr2:211375720-212538841	1	-	211383614	212538530	0	27	8340,298,171,98,147,76,156,186,99,123,133,75,155,94,133,200,91,74,127,114,142,119,66,135,187,152,393,	0,11132,44720,46286,48434,52687,55224,186182,243456,248201,254741,282033,289602,297443,303331,326246,328383,329597,336329,337814,346672,349355,374918,412304,571709,749031,1162728,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	211535652	211535769	chr2:211535652-211535769	7	+	211535652	211535652	16724991	1	117,	0,
#Partially deleted in new
chr2	211561761	212538582	chr2:211561761-212538582	0	-	211561761	211561761	8553170	20	327,99,123,133,75,155,94,133,200,91,74,127,114,142,119,66,135,187,152,134,	0,57415,62160,68700,95992,103561,111402,117290,140205,142342,143556,150288,151773,160631,163314,188877,226263,385668,562990,976687,
#Partially deleted in new
chr2	211619252	212538529	chr2:211619252-212538529	0	-	211619252	212538529	789624	19	23,123,133,45,155,94,133,200,91,74,127,114,142,119,66,135,187,152,81,	0,4669,11209,38697,46070,53911,59799,82714,84851,86065,92797,94282,103140,105823,131386,168772,328177,505499,919196,
#Partially deleted in new
chr2	211657596	211665354	chr2:211657596-211665354	0	-	211657596	211657596	8553170	3	232,45,32,	0,353,7726,
#Partially deleted in new
chr2	211750698	212429247	chr2:211750698-212429247	0	-	211750698	212124808	789624	5	6,135,187,152,89,	0,37326,196731,374053,678460,
#Deleted in new
chr2	211777205	211777856	chr2:211777205-211777856	7	+	211777205	211777205	16724991	1	651,	0,
#Deleted in new
chr2	211778272	211779763	chr2:211778272-211779763	7	+	211778272	211778272	16724991	1	1491,	0,
#Deleted in new
chr2	212124583	212125181	chr2:212124583-212125181	0	-	212124583	212124583	8553170	2	320,124,	0,474,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	212426262	212426360	chr2:212426262-212426360	3	-	212426262	212426262	5263520	1	98,	0,
#Deleted in new
chr2	212795330	212796720	chr2:212795330-212796720	1	+	212795330	212795330	789624	2	59,710,	0,680,
#Deleted in new
chr2	212832160	212832945	chr2:212832160-212832945	7	+	212832160	212832160	16724991	1	785,	0,
#Deleted in new
chr2	212911002	212919809	chr2:212911002-212919809	3	+	212911002	212911002	8553170	3	60,158,378,	0,7914,8429,
#Deleted in new
chr2	212926256	212926336	chr2:212926256-212926336	3	+	212926256	212926256	5263520	1	80,	0,
#Deleted in new
chr2	212926256	212926336	chr2:212926256-212926336	3	-	212926256	212926256	5263520	1	80,	0,
#Partially deleted in new
chr2	212999690	213151609	chr2:212999690-213151609	1	-	213007359	213147717	789624	8	8394,138,168,189,105,49,104,197,	0,22302,50022,57220,148017,148905,150453,151722,
#Partially deleted in new
chr2	212999690	213151609	chr2:212999690-213151609	1	-	213007359	213147717	789624	8	8394,144,168,189,105,49,104,197,	0,14100,50022,57220,148017,148905,150453,151722,
#Partially deleted in new
chr2	213005362	213150334	chr2:213005362-213150334	1	-	213007359	213150183	789624	8	2722,144,138,168,267,105,49,154,	0,8428,16630,44350,51470,142345,143233,144818,
#Partially deleted in new
chr2	213005362	213151603	chr2:213005362-213151603	3	-	213007359	213148629	789624	9	2722,144,138,168,267,105,49,104,191,	0,8428,16630,44350,51470,142345,143233,144781,146050,
#Partially deleted in new
chr2	213006038	213015278	chr2:213006038-213015278	0	-	213006038	213006038	8553170	2	2046,1488,	0,7752,
#Partially deleted in new
chr2	213007171	213151603	chr2:213007171-213151603	1	-	213007359	213148629	789624	9	913,144,138,168,189,105,49,104,191,	0,6619,14821,42541,49739,140536,141424,142972,144241,
#Partially deleted in new
chr2	213007352	213148629	chr2:213007352-213148629	0	-	213097940	213148629	789624	8	732,144,138,168,189,84,105,34,	0,6438,14640,42360,49558,90524,140355,141243,
#Partially deleted in new
chr2	213007356	213148629	chr2:213007356-213148629	0	-	213097940	213148629	789624	7	728,144,138,168,84,105,34,	0,6434,14636,42356,90520,140351,141239,
#Partially deleted in new
chr2	213007356	213148629	chr2:213007356-213148629	0	-	213097940	213148629	789624	9	728,144,138,168,267,69,84,105,34,	0,6434,14636,42356,49476,73813,90520,140351,141239,
#Partially deleted in new
chr2	213007356	213148629	chr2:213007356-213148629	0	-	213056703	213148629	789624	8	728,144,138,168,179,267,105,34,	0,6434,14636,42356,49209,49476,140351,141239,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	213007359	213148629	chr2:213007359-213148629	0	-	213021712	213148629	789624	9	725,144,122,77,138,168,267,105,34,	0,6431,9563,14284,14633,42353,49473,140348,141236,
#Partially deleted in new
chr2	213049849	213150408	chr2:213049849-213150408	0	-	213049849	213150183	789624	5	31,189,105,49,228,	0,7061,97858,98746,100331,
#Partially deleted in new
chr2	213056988	213152427	chr2:213056988-213152427	0	-	213056988	213148629	789624	4	111,105,49,302,	0,90719,91607,95137,
#Deleted in new
chr2	213147371	213150241	chr2:213147371-213150241	1	-	213147585	213150183	789624	3	441,49,61,	0,1224,2809,
#Deleted in new
chr2	213152969	213153659	chr2:213152969-213153659	3	+	213152969	213152969	8553170	1	690,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	213155805	213167712	chr2:213155805-213167712	3	-	213155805	213155805	8553170	2	397,320,	0,11587,
#Partially deleted in new
chr2	213284378	213375219	chr2:213284378-213375219	1	+	213284483	213375219	789624	10	241,47,96,119,138,108,118,70,110,12,	0,11685,12883,25680,32840,55784,66149,79697,90631,90829,
#Partially deleted in new
chr2	213284388	214410501	chr2:213284388-214410501	3	+	213284483	214410315	789624	16	231,47,96,119,138,108,118,70,110,128,144,186,127,66,127,362,	0,11675,12873,25670,32830,55774,66139,79687,90621,205574,578096,645571,729562,823807,864751,1125751,
#Partially deleted in new
chr2	213284388	214410501	chr2:213284388-214410501	0	+	213284483	213296044	789624	18	231,33,71,118,96,119,138,108,118,70,110,128,144,186,127,66,127,362,	0,1497,11651,12633,12873,25670,32830,55774,66139,79687,90621,205574,578096,645571,729562,823807,864751,1125751,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	213284391	213317978	chr2:213284391-213317978	1	+	213284483	213317372	789624	5	228,47,96,119,760,	0,11672,12870,25667,32827,
#Partially deleted in new
chr2	213284415	213365418	chr2:213284415-213365418	1	+	213284661	213364162	789624	7	336,96,119,138,108,118,1343,	0,12846,25643,32803,55747,66112,79660,
#Partially deleted in new
chr2	213284436	213302582	chr2:213284436-213302582	0	+	213284483	213297135	789624	5	183,47,118,96,70,	0,11627,12585,12825,18076,
#Partially deleted in new
chr2	213284436	213375054	chr2:213284436-213375054	0	+	213284483	213317224	789624	8	183,47,96,138,108,118,70,45,	0,11627,12825,32782,55726,66091,79639,90573,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	213284454	214241376	chr2:213284454-214241376	0	+	213284483	213296122	789624	14	165,65,96,108,118,70,110,128,144,186,127,66,127,3241,	0,11609,12807,55708,66073,79621,90555,205508,578030,645505,729496,823741,864685,953681,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	213284480	213422522	chr2:213284480-213422522	1	+	213284483	213422320	789624	10	139,47,96,119,138,108,118,70,110,385,	0,11583,12781,25578,32738,55682,66047,79595,90529,137657,
#Partially deleted in new
chr2	213296063	213364145	chr2:213296063-213364145	0	+	213296063	213296063	8553170	6	47,96,119,138,108,70,	0,1198,13995,21155,44099,68012,
#Partially deleted in new
chr2	213489962	214410318	chr2:213489962-214410318	0	+	213489962	214410315	789624	6	128,144,127,66,127,179,	0,372522,523988,618233,659177,920177,
#Partially deleted in new
chr2	213758066	213758159	chr2:213758066-213758159	3	+	213758066	213758066	5263520	1	93,	0,
#Partially deleted in new
chr2	213923862	214410233	chr2:213923862-214410233	0	+	213923862	213923862	8553170	5	142,127,66,127,94,	0,90088,184333,225277,486277,
#Partially deleted in new
chr2	214280637	214281452	chr2:214280637-214281452	7	-	214280637	214280637	16724991	1	815,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	214411064	214578959	chr2:214411064-214578959	3	+	214414193	214575820	789624	4	722,470,130,3288,	0,3049,25564,164607,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	214411064	214578959	chr2:214411064-214578959	1	+	214414193	214575701	789624	3	722,470,3288,	0,3049,164607,
#Deleted in new
chr2	214411076	214415203	chr2:214411076-214415203	0	+	214411076	214411076	8553170	2	710,1090,	0,3037,
#Partially deleted in new
chr2	214510195	214536890	chr2:214510195-214536890	3	+	214510195	214510195	789624	4	20,168,150,129,	0,14978,23800,26566,
#Deleted in new
chr2	214697726	214698059	chr2:214697726-214698059	7	+	214697726	214697726	16724991	1	333,	0,
#Partially deleted in new
chr2	214725645	214809704	chr2:214725645-214809704	1	-	214728675	214809569	0	11	3363,98,93,133,109,173,81,950,149,57,293,	0,4765,19421,20076,26801,41836,43586,54914,66651,71415,83766,
#Partially deleted in new
chr2	214725645	214809711	chr2:214725645-214809711	1	-	214728675	214809569	789624	6	3363,98,93,133,109,300,	0,4765,19421,20076,26801,83766,
#Partially deleted in new
chr2	214725645	214809711	chr2:214725645-214809711	1	-	214728675	214809569	789624	7	3363,98,93,133,109,57,300,	0,4765,19421,20076,26801,71415,83766,
#Partially deleted in new
chr2	214725645	214809711	chr2:214725645-214809711	1	-	214728675	214809569	0	10	3363,98,93,133,109,173,81,950,149,300,	0,4765,19421,20076,26801,41836,43586,54914,66651,83766,
#Partially deleted in new
chr2	214725645	214809711	chr2:214725645-214809711	3	-	214728675	214809569	789624	5	3363,98,149,57,300,	0,4765,66651,71415,83766,
#Partially deleted in new
chr2	214728423	214731145	chr2:214728423-214731145	0	-	214728423	214728423	8553170	3	585,98,238,	0,1987,2484,
#Partially deleted in new
chr2	214728537	214730508	chr2:214728537-214730508	0	-	214730244	214730508	789624	3	471,46,98,	0,1697,1873,
#Partially deleted in new
chr2	214728675	214809683	chr2:214728675-214809683	1	-	214728675	214809484	789624	3	333,98,272,	0,1735,80736,
#Partially deleted in new
chr2	214728676	214809642	chr2:214728676-214809642	1	-	214769292	214809569	0	10	332,98,93,133,109,173,81,149,57,231,	0,1734,16390,17045,23770,38805,40555,63620,68384,80735,
#Partially deleted in new
chr2	214728703	214809673	chr2:214728703-214809673	0	-	214781493	214809569	789624	10	305,98,93,133,109,173,81,950,57,262,	0,1707,16363,17018,23743,38778,40528,51856,68357,80708,
#Partially deleted in new
chr2	214730410	214809687	chr2:214730410-214809687	0	-	214730410	214809569	789624	6	98,93,133,109,57,276,	0,14656,15311,22036,66650,79001,
#Partially deleted in new
chr2	214745711	214752478	chr2:214745711-214752478	0	-	214745711	214745711	8553170	2	143,32,	0,6735,
#Partially deleted in new
chr2	214780896	214809670	chr2:214780896-214809670	0	-	214780896	214780896	8553170	2	613,259,	0,28515,
#Partially deleted in new
chr2	214796793	214809660	chr2:214796793-214809660	0	-	214796793	214796793	8553170	2	324,249,	0,12618,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	214810228	214963274	chr2:214810228-214963274	3	+	214810228	214810228	789624	4	204,117,123,1465,	0,23760,137596,151581,
#Deleted in new
chr2	214846946	214847081	chr2:214846946-214847081	3	+	214846946	214846946	5263520	1	135,	0,
#Deleted in new
chr2	214847127	214847445	chr2:214847127-214847445	7	+	214847127	214847127	16724991	1	318,	0,
#Partially deleted in new
chr2	214931541	215138428	chr2:214931541-215138428	3	-	214932633	215138208	789624	53	1200,138,106,93,104,135,142,110,205,254,160,116,178,55,106,88,128,94,87,253,151,237,161,197,219,187,147,135,70,330,115,316,180,91,120,140,211,165,174,125,113,257,107,119,76,113,179,186,98,92,154,94,289,	0,2536,5968,11383,13459,15880,17054,17498,19337,22312,23660,25121,26735,27482,35306,37178,38731,42407,43236,44243,46774,47262,48941,50645,52105,55000,56105,57787,58010,59160,66153,69163,70016,72667,76185,78789,79897,80429,83948,86466,87794,87998,94131,95278,100279,105411,114295,118084,120945,123031,132524,180055,206598,
#Partially deleted in new
chr2	214932621	215032086	chr2:214932621-215032086	1	-	214932633	215031927	789624	45	120,138,106,93,104,135,142,110,205,254,160,116,178,55,106,88,128,94,87,253,151,237,161,197,219,187,147,135,70,330,115,316,180,91,120,140,211,165,174,125,113,257,107,119,266,	0,1456,4888,10303,12379,14800,15974,16418,18257,21232,22580,24041,25655,26402,34226,36098,37651,41327,42156,43163,45694,46182,47861,49565,51025,53920,55025,56707,56930,58080,65073,68083,68936,71587,75105,77709,78817,79349,82868,85386,86714,86918,93051,94198,99199,
#Deleted in new
chr2	214960391	214962062	chr2:214960391-214962062	0	+	214960391	214960391	8553170	2	199,253,	0,1418,
#Deleted in new
chr2	215013123	215013610	chr2:215013123-215013610	0	+	215013123	215013123	8553170	2	94,55,	0,432,
#Partially deleted in new
chr2	215013144	215022917	chr2:215013144-215022917	0	+	215013144	215013144	8553170	2	73,26,	0,9747,
#Partially deleted in new
chr2	215021997	215042256	chr2:215021997-215042256	1	+	215021997	215021997	8553170	6	726,129,97,64,99,17,	0,894,8155,13772,16945,20242,
#Deleted in new
chr2	215022559	215023689	chr2:215022559-215023689	1	+	215022559	215022559	8553170	2	164,798,	0,332,
#Deleted in new
chr2	215022576	215023118	chr2:215022576-215023118	0	+	215022576	215022576	8553170	1	542,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	215022685	215042379	chr2:215022685-215042379	0	+	215022685	215022685	8553170	7	38,335,172,97,64,99,140,	0,206,6522,7467,13084,16257,19554,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	215023055	215042379	chr2:215023055-215042379	0	+	215023055	215023055	8553170	6	171,177,97,64,99,140,	0,6152,7097,12714,15887,19184,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	215023143	215042317	chr2:215023143-215042317	1	+	215023143	215023143	8553170	7	83,174,177,97,64,99,78,	0,2175,6064,7009,12626,15799,19096,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	215029056	215082772	chr2:215029056-215082772	3	+	215029056	215029056	8553170	9	328,97,227,64,99,140,66,116,178,	0,1096,3318,6713,9886,13183,15395,51710,53538,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	215032467	215075730	chr2:215032467-215075730	0	+	215032467	215032467	8553170	5	134,64,140,66,171,	0,3302,9772,11984,43092,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	215035800	215085488	chr2:215035800-215085488	0	+	215035800	215035800	8553170	6	33,99,140,66,116,55,	0,3142,6439,8651,44966,49633,
#Partially deleted in new
chr2	215075491	215138404	chr2:215075491-215138404	1	-	215075507	215138208	789624	3	126,94,265,	0,36105,62648,
#Partially deleted in new
chr2	215311816	215349763	chr2:215311816-215349763	3	+	215312142	215349655	0	16	345,127,77,67,89,152,157,126,108,86,90,129,93,183,156,228,	0,681,6340,7848,13424,14170,15005,20565,21533,23102,24218,26962,32962,34942,37277,37719,
#Partially deleted in new
chr2	215311955	215326056	chr2:215311955-215326056	0	+	215312142	215325272	789624	5	206,127,77,89,70,	0,542,6201,13285,14031,
#Partially deleted in new
chr2	215311991	215326139	chr2:215311991-215326139	0	+	215311991	215311991	8553170	6	170,127,77,67,150,153,	0,506,6165,7673,13188,13995,
#Partially deleted in new
chr2	215312071	215349763	chr2:215312071-215349763	0	+	215312142	215312274	789624	16	319,127,77,67,89,152,157,126,108,86,90,129,93,183,156,228,	0,426,6085,7593,13169,13915,14750,20310,21278,22847,23963,26707,32707,34687,37022,37464,
#Partially deleted in new
chr2	215312090	215349763	chr2:215312090-215349763	1	+	215312481	215349655	0	15	534,77,67,89,152,157,126,108,86,90,129,93,183,156,228,	0,6066,7574,13150,13896,14731,20291,21259,22828,23944,26688,32688,34668,37003,37445,
#Partially deleted in new
chr2	215312129	215335004	chr2:215312129-215335004	0	+	215312142	215312274	789624	9	214,127,77,67,89,152,126,108,86,	0,368,6027,7535,13111,13857,20252,21220,22789,
#Partially deleted in new
chr2	215312497	215326978	chr2:215312497-215326978	0	+	215318187	215326978	789624	6	127,103,67,89,152,157,	0,5633,7167,12743,13489,14324,
#Partially deleted in new
chr2	215334916	215347652	chr2:215334916-215347652	0	+	215334916	215334916	8553170	6	88,90,129,93,183,32,	0,1118,3862,9862,11842,12704,
#Partially deleted in new
chr2	215336021	215349298	chr2:215336021-215349298	0	+	215336021	215349279	789624	5	103,129,93,183,205,	0,2757,8757,10737,13072,
#Partially deleted in new
chr2	215338765	215349733	chr2:215338765-215349733	0	+	215338765	215338765	8553170	5	142,93,183,156,198,	0,6013,7993,10328,10770,
#Partially deleted in new
chr2	215338768	215347240	chr2:215338768-215347240	0	+	215338768	215338768	8553170	3	139,93,482,	0,6010,7990,
#Partially deleted in new
chr2	215338869	215345587	chr2:215338869-215345587	0	+	215338869	215338869	8553170	2	38,809,	0,5909,
#Deleted in new
chr2	215348984	215349756	chr2:215348984-215349756	0	+	215348984	215348984	8553170	2	265,221,	0,551,
#Partially deleted in new
chr2	215360439	215436067	chr2:215360439-215436067	1	-	215361554	215435802	0	45	1187,111,107,126,165,139,107,192,90,180,90,177,88,188,114,156,165,117,270,90,183,192,87,169,95,267,273,195,90,129,177,181,122,144,129,153,177,180,192,159,138,132,138,129,413,	0,1529,4439,5065,7423,9854,11469,11669,12882,14774,15189,16058,17735,18690,21772,22888,23580,24420,26249,27772,31192,34088,36697,37240,38817,43949,45798,46687,47668,47858,49123,49494,54397,58802,60233,61651,62910,63706,64654,67740,70275,71393,72884,74256,75215,
#Partially deleted in new
chr2	215360453	215436068	chr2:215360453-215436068	1	-	215361554	215435802	0	47	1173,111,107,126,165,139,107,267,90,180,90,177,88,188,270,114,156,165,117,270,90,183,273,192,87,169,95,267,273,195,90,129,177,181,122,144,129,153,177,180,192,159,138,132,138,129,414,	0,1515,4425,5051,7409,9840,11455,11655,12868,14760,15175,16044,17721,18676,20357,21758,22874,23566,24406,26235,27758,31178,32477,34074,36683,37226,38803,43935,45784,46673,47654,47844,49109,49480,54383,58788,60219,61637,62896,63692,64640,67726,70261,71379,72870,74242,75201,
#Partially deleted in new
chr2	215360453	215436068	chr2:215360453-215436068	1	-	215361554	215435802	0	46	1173,111,107,126,165,139,107,267,90,180,90,177,88,188,270,114,156,165,117,270,90,183,192,87,169,95,267,273,195,90,129,177,181,122,144,129,153,177,180,192,159,138,132,138,129,414,	0,1515,4425,5051,7409,9840,11455,11655,12868,14760,15175,16044,17721,18676,20357,21758,22874,23566,24406,26235,27758,31178,34074,36683,37226,38803,43935,45784,46673,47654,47844,49109,49480,54383,58788,60219,61637,62896,63692,64640,67726,70261,71379,72870,74242,75201,
#Partially deleted in new
chr2	215360453	215436172	chr2:215360453-215436172	1	-	215361554	215435802	0	46	1173,111,107,126,165,139,467,90,180,90,177,88,188,270,114,156,165,117,270,90,183,273,192,87,169,95,267,273,195,90,129,177,181,122,144,129,153,177,180,192,159,138,132,138,129,518,	0,1515,4425,5051,7409,9840,11455,12868,14760,15175,16044,17721,18676,20357,21758,22874,23566,24406,26235,27758,31178,32477,34074,36683,37226,38803,43935,45784,46673,47654,47844,49109,49480,54383,58788,60219,61637,62896,63692,64640,67726,70261,71379,72870,74242,75201,
#Partially deleted in new
chr2	215360453	215436068	chr2:215360453-215436068	3	-	215361554	215435802	0	44	1173,111,107,126,165,139,107,90,180,90,177,88,188,114,156,165,117,270,90,183,192,87,169,95,267,273,195,90,129,177,181,122,144,129,153,177,180,192,159,138,132,138,129,414,	0,1515,4425,5051,7409,9840,11455,12868,14760,15175,16044,17721,18676,21758,22874,23566,24406,26235,27758,31178,34074,36683,37226,38803,43935,45784,46673,47654,47844,49109,49480,54383,58788,60219,61637,62896,63692,64640,67726,70261,71379,72870,74242,75201,
#Partially deleted in new
chr2	215360457	215436068	chr2:215360457-215436068	1	-	215361554	215435802	0	45	1169,111,107,126,165,139,467,90,180,90,177,88,188,270,114,156,165,117,270,90,183,192,87,169,95,267,273,195,90,129,177,181,122,144,129,153,177,180,192,159,138,132,138,129,414,	0,1511,4421,5047,7405,9836,11451,12864,14756,15171,16040,17717,18672,20353,21754,22870,23562,24402,26231,27754,31174,34070,36679,37222,38799,43931,45780,46669,47650,47840,49105,49476,54379,58784,60215,61633,62892,63688,64636,67722,70257,71375,72866,74238,75197,
#Partially deleted in new
chr2	215360861	215436073	chr2:215360861-215436073	1	-	215361554	215435802	0	45	765,111,107,126,165,139,107,267,90,180,90,177,88,188,114,156,165,117,270,90,183,192,87,169,95,267,273,195,90,129,177,181,122,144,129,153,177,180,192,159,138,132,138,129,419,	0,1107,4017,4643,7001,9432,11047,11247,12460,14352,14767,15636,17313,18268,21350,22466,23158,23998,25827,27350,30770,33666,36275,36818,38395,43527,45376,46265,47246,47436,48701,49072,53975,58380,59811,61229,62488,63284,64232,67318,69853,70971,72462,73834,74793,
#Partially deleted in new
chr2	215360861	215436068	chr2:215360861-215436068	1	-	215361554	215435802	0	46	765,111,107,126,165,139,107,192,90,180,90,177,88,188,270,114,156,165,117,270,90,183,192,87,169,95,267,273,195,90,129,177,181,122,144,129,153,177,180,192,159,138,132,138,129,414,	0,1107,4017,4643,7001,9432,11047,11247,12460,14352,14767,15636,17313,18268,19949,21350,22466,23158,23998,25827,27350,30770,33666,36275,36818,38395,43527,45376,46265,47246,47436,48701,49072,53975,58380,59811,61229,62488,63284,64232,67318,69853,70971,72462,73834,74793,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr2	215360861	215393721	chr2:215360861-215393721	0	-	215360861	215360861	8553170	19	765,111,107,126,165,139,107,267,90,180,90,177,88,3196,156,957,270,90,2090,	0,1107,4017,4643,7001,9432,11047,11247,12460,14352,14767,15636,17313,18268,22466,23158,25827,27350,30770,
#Partially deleted in new
chr2	215360864	215436067	chr2:215360864-215436067	1	-	215361554	215435802	0	45	762,111,107,126,165,139,107,90,180,90,177,88,188,114,156,165,117,270,90,183,273,192,87,169,95,267,273,195,90,129,177,181,122,144,129,153,177,180,192,159,138,132,138,129,413,	0,1104,4014,4640,6998,9429,11044,12457,14349,14764,15633,17310,18265,21347,22463,23155,23995,25824,27347,30767,32066,33663,36272,36815,38392,43524,45373,46262,47243,47433,48698,49069,53972,58377,59808,61226,62485,63281,64229,67315,69850,70968,72459,73831,74790,
#Partially deleted in new
chr2	215360865	215436068	chr2:215360865-215436068	1	-	215361554	215435802	0	44	761,111,107,126,165,139,467,90,180,90,177,88,188,114,156,165,117,270,90,183,192,87,169,95,267,273,195,90,129,177,181,122,144,129,153,177,180,192,159,138,132,138,129,414,	0,1103,4013,4639,6997,9428,11043,12456,14348,14763,15632,17309,18264,21346,22462,23154,23994,25823,27346,30766,33662,36271,36814,38391,43523,45372,46261,47242,47432,48697,49068,53971,58376,59807,61225,62484,63280,64228,67314,69849,70967,72458,73830,74789,
#Deleted in new
chr2	215360865	215363640	chr2:215360865-215363640	0	-	215360865	215360865	8553170	2	761,1672,	0,1103,
#Partially deleted in new
chr2	215361146	215393147	chr2:215361146-215393147	0	-	215361554	215393147	789624	21	480,111,107,126,165,139,467,90,180,90,177,88,188,114,156,165,117,270,90,183,217,	0,822,3732,4358,6716,9147,10762,12175,14067,14482,15351,17028,17983,21065,22181,22873,23713,25542,27065,30485,31784,
#Partially deleted in new
chr2	215361340	215365676	chr2:215361340-215365676	0	-	215361340	215361340	8553170	4	286,111,107,172,	0,628,3538,4164,
#Deleted in new
chr2	215364369	215365517	chr2:215364369-215365517	0	-	215364369	215364369	8553170	2	616,13,	0,1135,
#Deleted in new
chr2	215364666	215365753	chr2:215364666-215365753	0	-	215364666	215364666	8553170	2	319,249,	0,838,
#Deleted in new
chr2	215367678	215370520	chr2:215367678-215370520	0	-	215367678	215367678	8553170	2	349,227,	0,2615,
#Partially deleted in new
chr2	215370342	215372482	chr2:215370342-215372482	0	-	215370342	215370342	8553170	3	90,107,374,	0,1566,1766,
#Partially deleted in new
chr2	215370379	215372439	chr2:215370379-215372439	0	-	215370379	215370379	8553170	2	53,531,	0,1529,
#Partially deleted in new
chr2	215371863	215375725	chr2:215371863-215375725	0	-	215371863	215371863	8553170	4	437,90,180,97,	0,1458,3350,3765,
#Partially deleted in new
chr2	215371908	215375689	chr2:215371908-215375689	0	-	215371908	215375689	789624	4	392,90,180,61,	0,1413,3305,3720,
#Partially deleted in new
chr2	215375632	215381329	chr2:215375632-215381329	0	-	215375632	215375632	8553170	5	86,177,88,188,519,	0,865,2542,3497,5178,
#Partially deleted in new
chr2	215379204	215383483	chr2:215379204-215383483	0	-	215379204	215379204	8553170	5	113,270,46,114,156,	0,1606,2798,3007,4123,
#Partially deleted in new
chr2	215382158	215384080	chr2:215382158-215384080	0	-	215382158	215382158	8553170	3	167,156,61,	0,1169,1861,
#Partially deleted in new
chr2	215408318	215409950	chr2:215408318-215409950	0	-	215408318	215408318	8553170	2	108,388,	0,1244,
#Partially deleted in new
chr2	215414660	215436073	chr2:215414660-215436073	1	-	215414803	215435802	0	13	298,144,129,153,177,180,192,159,138,132,138,129,419,	0,4581,6012,7430,8689,9485,10433,13519,16054,17172,18663,20035,20994,
#Partially deleted in new
chr2	215419288	215421270	chr2:215419288-215421270	0	-	215419288	215419288	8553170	2	97,598,	0,1384,
#Deleted in new
chr2	215436252	215436992	chr2:215436252-215436992	3	+	215436252	215436252	8553170	2	57,74,	0,666,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	215453706	215463871	chr2:215453706-215463871	3	+	215453706	215453706	789624	4	19,101,446,259,	0,3185,8243,9906,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	215476666	215480248	chr2:215476666-215480248	3	+	215476666	215476666	8553170	2	64,327,	0,3255,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	215530446	215545526	chr2:215530446-215545526	3	-	215530446	215530446	8553170	5	88,92,88,84,151,	0,1042,6135,12482,14929,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	215546197	215713895	chr2:215546197-215713895	3	+	215546197	215546197	8553170	8	216,68,66,78,263,92,203,656,	0,75660,119182,120785,131746,135300,135726,167042,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	215611562	215843536	chr2:215611562-215843536	3	-	215611562	215611562	789624	10	2176,358,233,76,124,145,101,91,175,211,	0,3714,9555,11123,12549,129314,132251,135741,138680,231763,
#Deleted in new
chr2	215620107	215621353	chr2:215620107-215621353	0	-	215620107	215620107	8553170	2	290,236,	0,1010,
#Partially deleted in new
chr2	215624122	215827441	chr2:215624122-215827441	0	-	215624122	215624122	8553170	5	113,101,91,175,90,	0,119691,123181,126120,203229,
#Partially deleted in new
chr2	215641767	215831590	chr2:215641767-215831590	0	-	215641767	215641767	8553170	5	52,101,91,175,162,	0,102046,105536,108475,189661,
#Partially deleted in new
chr2	215678023	215689771	chr2:215678023-215689771	0	+	215678023	215678023	8553170	4	65,203,120,120,	0,3900,5318,11628,
#Deleted in new
chr2	215718042	215719424	chr2:215718042-215719424	3	+	215718042	215718042	8553170	2	220,428,	0,954,
#Partially deleted in new
chr2	215743819	215843722	chr2:215743819-215843722	0	-	215743819	215743819	8553170	5	95,91,175,98,99,	0,3484,6423,99506,99804,
#Deleted in new
chr2	215804730	215804981	chr2:215804730-215804981	7	-	215804730	215804730	16724991	1	251,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	215869922	215870518	chr2:215869922-215870518	3	+	215869922	215869922	8553170	2	223,255,	0,341,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	215939307	215941719	chr2:215939307-215941719	3	-	215939307	215939307	8553170	2	343,36,	0,2376,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	215942804	216013613	chr2:215942804-216013613	3	-	215944862	216013327	789624	6	935,887,164,91,160,381,	0,1306,2766,4218,53501,70428,
#Partially deleted in new
chr2	215944489	216013623	chr2:215944489-216013623	1	-	215944862	216013327	789624	5	508,164,91,160,391,	0,1081,2533,51816,68743,
#Partially deleted in new
chr2	215944958	216033804	chr2:215944958-216033804	0	-	215944958	215996398	789624	5	39,164,91,160,122,	0,612,2064,51347,88724,
#Partially deleted in new
chr2	215944987	216034096	chr2:215944987-216034096	0	-	215944987	215996398	789624	5	10,164,91,160,135,	0,583,2035,51318,88974,
#Partially deleted in new
chr2	215945572	216032959	chr2:215945572-216032959	0	-	215945572	215996398	789624	4	162,91,160,171,	0,1450,50733,87216,
#Partially deleted in new
chr2	215996328	216081790	chr2:215996328-216081790	0	-	216051495	216081741	789624	8	137,170,112,111,97,166,134,173,	0,42862,47575,52934,55120,68983,70056,85289,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	216038408	216081816	chr2:216038408-216081816	3	-	216039274	216081741	0	8	952,112,111,97,82,166,134,199,	0,5495,10854,13040,20486,26903,27976,43209,
#Partially deleted in new
chr2	216039255	216066523	chr2:216039255-216066523	0	-	216039255	216039255	8553170	7	105,112,111,97,82,166,139,	0,4648,10007,12193,19639,26056,27129,
#Partially deleted in new
chr2	216043971	216057947	chr2:216043971-216057947	0	-	216043971	216043971	8553170	4	44,111,101,239,	0,5291,7473,13737,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	216063888	216081801	chr2:216063888-216081801	0	-	216063888	216063888	8553170	4	258,166,134,184,	0,1423,2496,17729,
#Partially deleted in new
chr2	216065209	216081800	chr2:216065209-216081800	0	-	216065209	216065209	8553170	3	268,134,183,	0,1175,16408,
#Partially deleted in new
chr2	216065449	216082955	chr2:216065449-216082955	0	-	216065449	216065449	8553170	3	28,134,478,	0,935,17028,
#Partially deleted in new
chr2	216081865	216099998	chr2:216081865-216099998	0	+	216095963	216099998	789624	3	108,397,79,	0,13972,18054,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	216081865	216102782	chr2:216081865-216102782	3	+	216095963	216100542	789624	4	114,86,397,2863,	0,281,13972,18054,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	216081888	216101065	chr2:216081888-216101065	1	+	216095963	216100542	789624	3	91,397,1146,	0,13949,18031,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	216081894	216102783	chr2:216081894-216102783	1	+	216095963	216100542	789624	3	81,397,2864,	0,13943,18025,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	216081918	216102382	chr2:216081918-216102382	1	+	216095963	216100542	789624	3	314,397,2463,	0,13919,18001,
#Partially deleted in new
chr2	216081918	216099953	chr2:216081918-216099953	0	+	216095963	216099953	789624	4	61,86,397,34,	0,228,13919,18001,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr2	216107463	216206303	chr2:216107463-216206303	3	+	216109436	216205202	0	23	69,46,367,114,184,49,123,192,115,139,113,63,138,91,134,194,94,70,110,97,68,75,1116,	0,189,1627,5552,9195,10282,11579,14598,18453,20072,23411,24861,29624,30625,33722,40619,52604,54515,82761,85175,87455,96858,97724,
#Partially deleted in new
chr2	216109296	216206291	chr2:216109296-216206291	1	+	216109436	216205202	0	21	161,114,184,49,123,192,115,139,113,63,138,91,134,194,94,70,110,97,68,75,1104,	0,3719,7362,8449,9746,12765,16620,18239,21578,23028,27791,28792,31889,38786,50771,52682,80928,83342,85622,95025,95891,
#Partially deleted in new
chr2	216109330	216119139	chr2:216109330-216119139	0	+	216109330	216109330	8553170	5	127,114,184,54,97,	0,3685,7328,8410,9712,
#Partially deleted in new
chr2	216109341	216117038	chr2:216109341-216117038	0	+	216109341	216109341	8553170	3	116,114,380,	0,3674,7317,
#Partially deleted in new
chr2	216109350	216119108	chr2:216109350-216119108	0	+	216113033	216119108	789624	6	107,85,114,184,49,66,	0,1116,3665,7308,8395,9692,
#Partially deleted in new
chr2	216113091	216119165	chr2:216113091-216119165	0	+	216113091	216116658	789624	4	38,205,49,123,	0,3546,4654,5951,
#Partially deleted in new
chr2	216116884	216205423	chr2:216116884-216205423	0	+	216116884	216116884	8553170	18	910,123,192,115,139,113,63,138,91,134,194,94,70,110,97,68,75,236,	0,2158,5177,9032,10651,13990,15440,20203,21204,24301,31198,43183,45094,73340,75754,78034,87437,88303,
#Partially deleted in new
chr2	216125922	216127990	chr2:216125922-216127990	0	+	216125922	216125922	8553170	2	109,455,	0,1613,
#Partially deleted in new
chr2	216130709	216141319	chr2:216130709-216141319	0	+	216130709	216130709	8553170	6	71,113,63,138,91,134,	0,165,1615,6378,7379,10476,
#Deleted in new
chr2	216156341	216156811	chr2:216156341-216156811	7	-	216156341	216156341	16724991	1	470,	0,
#Deleted in new
chr2	216174895	216176032	chr2:216174895-216176032	7	-	216174895	216174895	16724991	1	1137,	0,
#Deleted in new
chr2	216204015	216205422	chr2:216204015-216205422	0	+	216204015	216204015	8553170	2	381,235,	0,1172,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	216211403	216213519	chr2:216211403-216213519	3	+	216211403	216211403	8553170	1	2116,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	216217044	216220192	chr2:216217044-216220192	3	+	216217044	216217044	789624	1	3148,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	216257864	216372027	chr2:216257864-216372027	3	-	216259311	216370260	789624	4	1815,193,156,2283,	0,19807,25709,111880,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	216259594	216266130	chr2:216259594-216266130	3	+	216259594	216259594	8553170	2	174,610,	0,5926,
#Partially deleted in new
chr2	216303324	216321737	chr2:216303324-216321737	3	+	216303324	216303324	8553170	3	335,71,169,	0,14753,18244,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	216351402	216351504	chr2:216351402-216351504	3	+	216351402	216351402	8553170	1	102,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	216385287	216412696	chr2:216385287-216412696	3	-	216385287	216385287	8553170	5	97,77,121,99,272,	0,1491,2215,11616,27137,
#Partially deleted in new
chr2	216412413	216483053	chr2:216412413-216483053	3	+	216414704	216482977	0	18	235,37,869,51,234,51,187,151,159,66,141,219,71,103,183,101,97,316,	0,1442,2233,3843,7885,11219,16182,20304,22924,26006,34604,38432,52183,55530,62855,64695,65789,70324,
#Partially deleted in new
chr2	216412413	216415141	chr2:216412413-216415141	0	+	216414704	216415141	789624	3	190,37,495,	0,1442,2233,
#Partially deleted in new
chr2	216412509	216415095	chr2:216412509-216415095	0	+	216414704	216415095	789624	3	225,37,449,	0,1346,2137,
#Partially deleted in new
chr2	216412560	216414762	chr2:216412560-216414762	0	+	216414704	216414762	789624	3	157,37,116,	0,1295,2086,
#Partially deleted in new
chr2	216412742	216483017	chr2:216412742-216483017	1	+	216414704	216482977	0	18	56,37,869,51,234,51,187,151,159,66,141,219,71,103,183,101,97,280,	0,1113,1904,3514,7556,10890,15853,19975,22595,25677,34275,38103,51854,55201,62526,64366,65460,69995,
#Partially deleted in new
chr2	216412764	216414981	chr2:216412764-216414981	0	+	216414704	216414981	789624	3	172,37,335,	0,1091,1882,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	216412764	216414363	chr2:216412764-216414363	0	+	216412764	216412764	8553170	2	34,508,	0,1091,
#Partially deleted in new
chr2	216415007	216428779	chr2:216415007-216428779	0	+	216415007	216428779	789624	4	508,51,234,184,	0,1249,5291,13588,
#Partially deleted in new
chr2	216415112	216483017	chr2:216415112-216483017	0	+	216415112	216482977	789624	15	403,51,234,51,187,151,159,141,219,71,103,183,101,97,280,	0,1144,5186,8520,13483,17605,20225,31905,35733,49484,52831,60156,61996,63090,67625,
#Partially deleted in new
chr2	216415944	216428712	chr2:216415944-216428712	0	+	216416285	216428712	789624	5	85,51,234,51,117,	0,312,4354,7688,12651,
#Partially deleted in new
chr2	216427054	216432772	chr2:216427054-216432772	0	+	216427054	216427054	8553170	3	391,187,55,	0,1541,5663,
#Partially deleted in new
chr2	216428775	216447061	chr2:216428775-216447061	0	+	216428775	216447061	789624	6	7,151,159,66,57,44,	0,3942,6562,9644,17886,18242,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	216447121	216451601	chr2:216447121-216451601	0	+	216447121	216447121	8553170	2	37,756,	0,3724,
#Partially deleted in new
chr2	216479029	216498761	chr2:216479029-216498761	3	-	216479029	216479029	8553170	3	230,127,155,	0,9087,19577,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	216483031	216487196	chr2:216483031-216487196	3	-	216483031	216483031	8553170	2	905,71,	0,4094,
#Partially deleted in new
chr2	216486770	216498746	chr2:216486770-216498746	1	-	216486770	216486770	8553170	2	610,140,	0,11836,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	216487803	216498750	chr2:216487803-216498750	0	-	216487803	216487803	8553170	2	440,144,	0,10803,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	216498188	216504086	chr2:216498188-216504086	3	+	216498874	216501404	0	4	689,129,83,2746,	0,1081,1760,3152,
#Partially deleted in new
chr2	216498824	216501456	chr2:216498824-216501456	0	+	216498824	216498824	8553170	2	574,1508,	0,1124,
#Partially deleted in new
chr2	216498824	216501467	chr2:216498824-216501467	0	+	216498824	216498824	8553170	3	53,129,1519,	0,445,1124,
#Partially deleted in new
chr2	216498843	216501460	chr2:216498843-216501460	0	+	216498843	216498843	8553170	2	34,2191,	0,426,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	216498849	216529454	chr2:216498849-216529454	1	+	216498874	216529273	789624	4	28,129,83,185,	0,420,1099,30420,
#Partially deleted in new
chr2	216498854	216579180	chr2:216498854-216579180	1	+	216498874	216578933	789624	4	23,129,83,260,	0,415,1094,80066,
#Partially deleted in new
chr2	216498861	216501462	chr2:216498861-216501462	0	+	216498874	216499958	789624	5	16,129,35,83,122,	0,408,970,1087,2479,
#Partially deleted in new
chr2	216498866	216501467	chr2:216498866-216501467	0	+	216498866	216498866	8553170	3	532,83,127,	0,1082,2474,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	216499085	216529451	chr2:216499085-216529451	1	+	216499338	216529273	789624	5	313,83,59,61,182,	0,863,20246,21628,30184,
#Partially deleted in new
chr2	216499085	216501463	chr2:216499085-216501463	1	+	216499338	216501404	789624	4	66,129,83,123,	0,184,863,2255,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	216499085	216529587	chr2:216499085-216529587	1	+	216499338	216520753	789624	4	313,83,61,318,	0,863,21628,30184,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	216499139	216529484	chr2:216499139-216529484	1	+	216499338	216520753	789624	5	41,129,83,61,215,	0,130,809,21574,30130,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	216529024	216529583	chr2:216529024-216529583	0	+	216529024	216529024	8553170	1	559,	0,
#Partially deleted in new
chr2	216590425	216606938	chr2:216590425-216606938	3	-	216590425	216590425	789624	4	658,60,389,77,	0,4758,8210,16436,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	216604770	216611202	chr2:216604770-216611202	3	+	216604770	216604770	8553170	2	195,459,	0,5973,
#Deleted in new
chr2	216610341	216610959	chr2:216610341-216610959	7	-	216610341	216610341	16724991	1	618,	0,
#Partially deleted in new
chr2	216632827	216661917	chr2:216632827-216661917	0	+	216660612	216661917	789624	3	187,230,60,	0,27729,29030,
#Partially deleted in new
chr2	216633394	216664436	chr2:216633394-216664436	3	+	216633523	216664104	0	4	571,230,141,497,	0,27162,28463,30545,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	216633428	216664433	chr2:216633428-216664433	0	+	216633428	216633428	8553170	2	537,3877,	0,27128,
#Partially deleted in new
chr2	216659617	216664285	chr2:216659617-216664285	1	+	216659736	216664104	789624	4	129,230,141,346,	0,939,2240,4322,
#Partially deleted in new
chr2	216660732	216664409	chr2:216660732-216664409	0	+	216660732	216663955	789624	3	54,227,470,	0,1039,3207,
#Partially deleted in new
chr2	216672104	216695525	chr2:216672104-216695525	3	-	216676750	216694775	0	4	4778,120,230,1087,	0,6007,6745,22334,
#Partially deleted in new
chr2	216678757	216694667	chr2:216678757-216694667	0	-	216678757	216678757	8553170	2	322,229,	0,15681,
#Partially deleted in new
chr2	216678852	216694794	chr2:216678852-216694794	0	-	216678852	216694775	789624	2	362,356,	0,15586,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	216694463	216993999	chr2:216694463-216993999	3	+	216694463	216694463	8553170	4	298,90,122,42,	0,17916,70425,299494,
#Deleted in new
chr2	216785773	216786144	chr2:216785773-216786144	7	-	216785773	216785773	16724991	1	371,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	216793488	216793600	chr2:216793488-216793600	7	-	216793488	216793488	16724991	1	112,	0,
#Deleted in new
chr2	216799607	216805335	chr2:216799607-216805335	3	+	216799607	216799607	8553170	2	78,611,	0,5117,
#Deleted in new
chr2	216805736	216806129	chr2:216805736-216806129	7	-	216805736	216805736	16724991	1	393,	0,
#Deleted in new
chr2	216854388	216855132	chr2:216854388-216855132	3	-	216854388	216854388	8553170	2	419,164,	0,580,
#Deleted in new
chr2	216859457	216860064	chr2:216859457-216860064	3	-	216859666	216860034	789624	2	238,169,	0,438,
#Partially deleted in new
chr2	216866331	216867813	chr2:216866331-216867813	3	-	216866331	216866331	789624	2	197,233,	0,1249,
#Deleted in new
chr2	216868011	216869156	chr2:216868011-216869156	3	+	216868011	216868011	8553170	2	375,166,	0,979,
#Deleted in new
chr2	216870440	216873932	chr2:216870440-216873932	3	-	216870440	216870440	8553170	2	517,2618,	0,874,
#Deleted in new
chr2	216870771	216871639	chr2:216870771-216871639	3	+	216870771	216870771	789624	2	209,184,	0,684,
#Deleted in new
chr2	216995905	216996490	chr2:216995905-216996490	3	+	216995905	216995905	8553170	1	585,	0,
#Deleted in new
chr2	217251555	217251875	chr2:217251555-217251875	3	+	217251555	217251555	8553170	1	320,	0,
#Partially deleted in new
chr2	217282738	217336120	chr2:217282738-217336120	3	+	217282738	217282738	789624	5	71,84,139,100,163,	0,13165,13893,19947,53219,
#Deleted in new
chr2	217283369	217283523	chr2:217283369-217283523	3	+	217283369	217283369	8553170	1	154,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	217284018	217599932	chr2:217284018-217599932	3	-	217284018	217284018	789624	12	845,236,258,125,156,221,196,83,99,360,178,321,	0,33947,34901,41827,43978,141283,142572,143372,148904,149738,194362,315593,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	217319166	217756593	chr2:217319166-217756593	0	-	217319166	217319166	8553170	11	11,125,156,221,196,83,99,169,178,1218,126,	0,6679,8830,106135,107424,108224,113756,114781,159214,280445,437301,
#Partially deleted in new
chr2	217425509	217434216	chr2:217425509-217434216	1	-	217425509	217425509	8553170	5	13,196,83,99,269,	0,1081,1881,7413,8438,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	217693894	217696763	chr2:217693894-217696763	7	+	217693894	217693894	16724991	1	2869,	0,
#Partially deleted in new
chr2	217703899	217756555	chr2:217703899-217756555	1	-	217703899	217703899	8553170	5	175,73,89,127,88,	0,9129,35587,52121,52568,
#Deleted in new
chr2	217760546	217761291	chr2:217760546-217761291	7	-	217760546	217760546	16724991	1	745,	0,
#Partially deleted in new
chr2	217799587	218010421	chr2:217799587-218010421	3	-	217804458	218010195	789624	33	5016,33,69,169,72,78,93,132,87,1070,199,93,76,197,1578,117,66,130,76,61,113,84,65,123,51,172,50,51,42,42,38,115,322,	0,8487,9015,10235,10660,12780,13627,14097,15324,18102,22152,31867,35503,36427,47922,81310,82758,85447,86156,86456,86946,91374,93360,93851,95418,98210,100875,106747,107622,120607,179177,191354,210512,
#Partially deleted in new
chr2	217799788	217944128	chr2:217799788-217944128	1	-	217804458	217897965	789624	33	4815,33,69,169,72,78,93,132,87,1070,199,39,24,93,76,197,1578,117,66,130,76,61,113,84,65,123,51,172,50,51,42,42,264,	0,8286,8814,10034,10459,12579,13426,13896,15123,17901,21951,30055,30578,31666,35302,36226,47721,81109,82557,85246,85955,86255,86745,91173,93159,93650,95217,98009,100674,106546,107421,120406,144076,
#Partially deleted in new
chr2	217802788	217842160	chr2:217802788-217842160	1	-	217804458	217842079	789624	15	1815,33,69,169,72,78,93,132,87,1070,199,93,76,197,109,	0,5286,5814,7034,7459,9579,10426,10896,12123,14901,18951,28666,32302,33226,39263,
#Partially deleted in new
chr2	217803445	217944005	chr2:217803445-217944005	1	-	217804458	217897965	789624	32	1158,33,69,169,72,78,90,132,87,1070,199,24,93,76,197,1578,117,66,130,76,61,113,84,65,123,51,172,50,51,42,42,141,	0,4629,5157,6377,6802,8922,9769,10239,11466,14244,18294,26921,28009,31645,32569,44064,77452,78900,81589,82298,82598,83088,87516,89502,89993,91560,94352,97017,102889,103764,116749,140419,
#Partially deleted in new
chr2	217803445	217944005	chr2:217803445-217944005	1	-	217804458	217880904	789624	31	1158,33,69,169,72,78,93,132,87,1070,199,93,76,197,1578,117,66,130,76,61,113,84,65,123,51,172,50,51,42,42,141,	0,4629,5157,6377,6802,8922,9769,10239,11466,14244,18294,28009,31645,32569,44064,77452,78900,81589,82298,82598,83088,87516,89502,89993,91560,94352,97017,102889,103764,116749,140419,
#Partially deleted in new
chr2	217803797	217814016	chr2:217803797-217814016	0	-	217803797	217803797	8553170	8	806,33,69,169,72,78,93,332,	0,4277,4805,6025,6450,8570,9417,9887,
#Partially deleted in new
chr2	217803865	217920209	chr2:217803865-217920209	1	-	217804458	217897965	789624	31	738,33,69,169,72,78,90,132,87,1070,199,24,93,76,197,1578,117,66,130,76,61,113,84,65,123,51,172,50,51,42,15,	0,4209,4737,5957,6382,8502,9349,9819,11046,13824,17874,26501,27589,31225,32149,43644,77032,78480,81169,81878,82178,82668,87096,89082,89573,91140,93932,96597,102469,103344,116329,
#Partially deleted in new
chr2	217803865	217920209	chr2:217803865-217920209	1	-	217804458	217897965	789624	30	738,33,69,169,72,78,93,132,87,1070,199,93,76,197,1578,117,66,130,76,61,113,84,65,123,51,172,50,51,42,15,	0,4209,4737,5957,6382,8502,9349,9819,11046,13824,17874,27589,31225,32149,43644,77032,78480,81169,81878,82178,82668,87096,89082,89573,91140,93932,96597,102469,103344,116329,
#Deleted in new
chr2	217809713	217810304	chr2:217809713-217810304	0	-	217809713	217809713	8553170	2	278,57,	0,534,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	217813708	217815368	chr2:217813708-217815368	0	-	217813708	217813708	8553170	2	108,457,	0,1203,
#Partially deleted in new
chr2	217848175	218002995	chr2:217848175-218002995	0	-	217848175	218002872	789624	19	912,117,66,130,76,61,113,84,65,123,51,172,50,51,42,42,38,115,156,	0,32722,34170,36859,37568,37868,38358,42786,44772,45263,46830,49622,52287,58159,59034,72019,130589,142766,154664,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	217848355	217885880	chr2:217848355-217885880	0	-	217848355	217848355	8553170	4	732,1514,130,137,	0,32542,36679,37388,
#Partially deleted in new
chr2	217848471	217858633	chr2:217848471-217858633	0	-	217848471	217848471	8553170	2	616,142,	0,10020,
#Partially deleted in new
chr2	217848883	217905461	chr2:217848883-217905461	0	-	217848883	217905445	789624	14	204,117,66,130,76,61,113,84,65,123,51,172,50,166,	0,32014,33462,36151,36860,37160,37650,42078,44064,44555,46122,48914,51579,56412,
#Partially deleted in new
chr2	217859228	217903813	chr2:217859228-217903813	1	-	217859597	217903641	789624	14	473,117,66,130,76,61,113,84,65,123,51,172,50,211,	0,21669,23117,25806,26515,26815,27305,31733,33719,34210,35777,38569,41234,44374,
#Partially deleted in new
chr2	217879291	217885810	chr2:217879291-217885810	0	-	217879444	217885810	789624	5	221,117,66,130,67,	0,1606,3054,5743,6452,
#Partially deleted in new
chr2	217890327	217895056	chr2:217890327-217895056	0	-	217890327	217890327	8553170	4	718,65,123,51,	0,2620,3111,4678,
#Partially deleted in new
chr2	217893472	217978934	chr2:217893472-217978934	0	-	217893472	217897965	789624	8	89,51,172,50,51,42,42,170,	0,1533,4325,6990,12862,13737,26722,85292,
#Partially deleted in new
chr2	217895040	217902009	chr2:217895040-217902009	0	-	217895040	217897965	789624	4	16,172,50,300,	0,2757,5422,6669,
#Partially deleted in new
chr2	217897794	217937162	chr2:217897794-217937162	0	-	217897794	217936980	789624	6	175,50,51,42,42,188,	0,2668,8540,9415,22400,39180,
#Partially deleted in new
chr2	217897892	217944070	chr2:217897892-217944070	0	-	217897892	217897965	789624	7	77,50,114,51,42,42,206,	0,2570,3817,8442,9317,22302,45972,
#Deleted in new
chr2	217900512	217900628	chr2:217900512-217900628	3	-	217900512	217900512	5263520	1	116,	0,
#Deleted in new
chr2	217986739	217991029	chr2:217986739-217991029	0	-	217986739	217986739	8553170	2	305,88,	0,4202,
#Partially deleted in new
chr2	217990941	218033982	chr2:217990941-218033982	0	-	217990941	218033975	8553170	2	115,163,	0,42878,
#Partially deleted in new
chr2	218034959	218068849	chr2:218034959-218068849	0	+	218034959	218034959	8553170	3	435,87,49,	0,23635,33841,
#Partially deleted in new
chr2	218034987	218090581	chr2:218034987-218090581	0	+	218070605	218075118	789624	14	197,78,87,964,152,107,126,144,70,648,107,147,111,630,	0,329,23607,33607,35512,35765,37386,38255,38828,40105,41439,48122,54264,54964,
#Partially deleted in new
chr2	218035068	218070514	chr2:218035068-218070514	0	+	218035068	218035068	8553170	6	116,78,87,177,78,15,	0,248,23526,34103,34412,35431,
#Partially deleted in new
chr2	218035095	218070838	chr2:218035095-218070838	0	+	218035095	218035095	8553170	6	89,87,214,78,152,89,	0,23499,34039,34385,35404,35654,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	218059154	218065729	chr2:218059154-218065729	7	-	218059154	218059154	16724991	2	2282,221,	0,6354,
#Deleted in new
chr2	218060338	218061412	chr2:218060338-218061412	5	-	218060338	218060338	16724991	1	1074,	0,
#Deleted in new
chr2	218068985	218070623	chr2:218068985-218070623	0	+	218068985	218068985	8553170	3	363,78,124,	0,495,1514,
#Deleted in new
chr2	218069013	218070817	chr2:218069013-218070817	0	+	218069013	218069013	8553170	5	76,177,78,152,65,	0,158,467,1486,1739,
#Partially deleted in new
chr2	218069254	218090580	chr2:218069254-218090580	1	+	218070605	218089837	789624	12	304,152,107,126,107,144,130,648,107,147,111,894,	0,1245,1498,3119,3524,3988,4561,5838,7172,13855,19997,20432,
#Deleted in new
chr2	218070305	218072499	chr2:218070305-218072499	0	+	218070305	218070305	8553170	3	346,110,126,	0,444,2068,
#Partially deleted in new
chr2	218070495	218090580	chr2:218070495-218090580	3	+	218070605	218090054	789624	11	156,107,126,107,144,70,648,107,147,111,629,	0,257,1878,2283,2747,3320,4597,5931,12614,18756,19456,
#Deleted in new
chr2	218072870	218075720	chr2:218072870-218075720	0	+	218072870	218072870	8553170	3	15,144,628,	0,372,2222,
#Partially deleted in new
chr2	218125288	218135403	chr2:218125288-218135403	0	+	218134801	218135403	789624	4	71,63,52,627,	0,1002,4025,9488,
#Partially deleted in new
chr2	218125680	218135216	chr2:218125680-218135216	0	+	218134801	218135216	789624	4	30,63,52,440,	0,610,3633,9096,
#Partially deleted in new
chr2	218125704	218134846	chr2:218125704-218134846	0	+	218134801	218134846	789624	4	77,63,52,70,	0,586,3609,9072,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	218126003	218137253	chr2:218126003-218137253	3	+	218134801	218135884	0	3	350,52,2477,	0,3310,8773,
#Partially deleted in new
chr2	218126018	218135208	chr2:218126018-218135208	0	+	218134801	218135208	789624	4	50,63,52,432,	0,272,3295,8758,
#Partially deleted in new
chr2	218129286	218135318	chr2:218129286-218135318	0	+	218134801	218135318	789624	2	79,542,	0,5490,
#Partially deleted in new
chr2	218130849	218134846	chr2:218130849-218134846	0	+	218134801	218134846	789624	2	153,70,	0,3927,
#Partially deleted in new
chr2	218162844	218166995	chr2:218162844-218166995	3	-	218164158	218165211	0	2	2400,88,	0,4063,
#Partially deleted in new
chr2	218200433	218201388	chr2:218200433-218201388	7	+	218200433	218200433	16724991	2	265,381,	0,574,
#Partially deleted in new
chr2	218217093	218254348	chr2:218217093-218254348	3	+	218217470	218253915	789624	11	161,82,35,113,46,187,94,127,101,101,458,	0,369,8826,11644,17258,21570,22297,28326,32270,32727,36797,
#Partially deleted in new
chr2	218217140	218234398	chr2:218217140-218234398	0	+	218217470	218234398	789624	5	114,173,35,113,47,	0,231,8779,11597,17211,
#Partially deleted in new
chr2	218217146	218235052	chr2:218217146-218235052	0	+	218217146	218217146	8553170	5	108,82,35,113,701,	0,316,8773,11591,17205,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	218217148	218235390	chr2:218217148-218235390	0	+	218217148	218217148	8553170	6	106,82,35,113,46,195,	0,314,8771,11589,17203,18047,
#Partially deleted in new
chr2	218217180	218238849	chr2:218217180-218238849	0	+	218217470	218234856	789624	7	74,82,35,113,46,196,186,	0,282,8739,11557,17171,17668,21483,
#Partially deleted in new
chr2	218217193	218245457	chr2:218217193-218245457	0	+	218217193	218217193	8553170	6	61,35,113,187,94,38,	0,8726,11544,21470,22197,28226,
#Partially deleted in new
chr2	218217196	218238723	chr2:218217196-218238723	0	+	218217196	218217196	8553170	6	58,35,113,46,196,60,	0,8723,11541,17155,17652,21467,
#Partially deleted in new
chr2	218217201	218239485	chr2:218217201-218239485	0	+	218217470	218227003	789624	8	53,82,35,102,113,46,187,95,	0,261,8718,9794,11536,17150,21462,22189,
#Partially deleted in new
chr2	218217209	218254356	chr2:218217209-218254356	1	+	218217470	218253915	789624	10	335,35,113,46,187,94,127,101,101,466,	0,8710,11528,17142,21454,22181,28210,32154,32611,36681,
#Partially deleted in new
chr2	218217454	218239195	chr2:218217454-218239195	0	+	218217454	218217454	8553170	5	90,35,113,46,532,	0,8465,11283,16897,21209,
#Partially deleted in new
chr2	218225918	218229303	chr2:218225918-218229303	0	+	218225918	218225918	8553170	2	36,566,	0,2819,
#Partially deleted in new
chr2	218225918	218239017	chr2:218225918-218239017	0	+	218225918	218225918	8553170	3	36,113,354,	0,2819,12745,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	218228802	218238730	chr2:218228802-218238730	0	+	218228802	218228802	8553170	5	48,46,196,365,67,	0,5549,6046,7566,9861,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	218232999	218254108	chr2:218232999-218254108	0	+	218232999	218232999	8553170	7	1398,187,94,127,101,101,218,	0,5664,6391,12420,16364,16821,20891,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	218235340	218254108	chr2:218235340-218254108	0	+	218235340	218235340	8553170	7	1393,187,94,127,101,101,218,	0,3323,4050,10079,14023,14480,18550,
#Deleted in new
chr2	218238718	218239562	chr2:218238718-218239562	0	+	218238718	218238718	8553170	2	132,172,	0,672,
#Partially deleted in new
chr2	218245425	218254123	chr2:218245425-218254123	0	+	218245425	218253977	789624	5	121,101,101,88,233,	0,3938,4395,7519,8465,
#Partially deleted in new
chr2	218249591	218254110	chr2:218249591-218254110	0	+	218249591	218249591	8553170	2	330,220,	0,4299,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	218255318	218257366	chr2:218255318-218257366	3	+	218255318	218255318	8553170	1	2048,	0,
#Partially deleted in new
chr2	218259495	218263859	chr2:218259495-218263859	3	+	218262724	218263717	789624	2	689,1180,	0,3184,
#Deleted in new
chr2	218261014	218263859	chr2:218261014-218263859	1	+	218262724	218263717	789624	2	202,1180,	0,1665,
#Deleted in new
chr2	218261014	218263859	chr2:218261014-218263859	1	+	218262724	218263717	789624	2	202,1801,	0,1044,
#Deleted in new
chr2	218261033	218263848	chr2:218261033-218263848	1	+	218262724	218263717	789624	2	183,1282,	0,1533,
#Partially deleted in new
chr2	218264122	218270257	chr2:218264122-218270257	3	-	218264532	218270086	789624	11	486,155,91,104,116,84,145,140,120,153,292,	0,897,1248,1456,1708,1941,2320,2724,3371,5259,5843,
#Partially deleted in new
chr2	218264128	218270178	chr2:218264128-218270178	1	-	218264532	218270086	789624	11	480,155,91,104,116,84,145,140,120,156,213,	0,891,1242,1450,1702,1935,2314,2718,3365,5253,5837,
#Partially deleted in new
chr2	218264129	218270088	chr2:218264129-218270088	0	-	218264129	218264129	8553170	8	479,155,91,1009,140,120,153,123,	0,890,1241,1449,2717,3364,5252,5836,
#Partially deleted in new
chr2	218264161	218269740	chr2:218264161-218269740	1	-	218264532	218269598	789624	10	447,155,91,104,116,84,145,140,120,359,	0,858,1209,1417,1669,1902,2281,2685,3332,5220,
#Deleted in new
chr2	218264180	218265921	chr2:218264180-218265921	0	-	218264180	218264180	8553170	3	428,155,551,	0,839,1190,
#Partially deleted in new
chr2	218264182	218270116	chr2:218264182-218270116	0	-	218264182	218264182	8553170	10	426,155,91,368,84,145,140,120,153,151,	0,837,1188,1396,1881,2260,2664,3311,5199,5783,
#Deleted in new
chr2	218264359	218266081	chr2:218264359-218266081	0	-	218264532	218266081	789624	6	249,155,91,104,116,27,	0,660,1011,1219,1471,1695,
#Deleted in new
chr2	218265416	218266844	chr2:218265416-218266844	0	-	218265416	218265416	8553170	3	530,84,402,	0,647,1026,
#Partially deleted in new
chr2	218266086	218269710	chr2:218266086-218269710	0	-	218266086	218269517	789624	6	61,145,140,120,153,52,	0,356,760,1407,3295,3572,
#Partially deleted in new
chr2	218267379	218270145	chr2:218267379-218270145	0	-	218267379	218267379	8553170	3	234,153,180,	0,2002,2586,
#Partially deleted in new
chr2	218270391	218272947	chr2:218270391-218272947	1	+	218270535	218272762	789624	3	211,169,378,	0,989,2178,
#Partially deleted in new
chr2	218270484	218346793	chr2:218270484-218346793	3	+	218270535	218344981	789624	10	118,169,116,113,59,93,164,87,116,1986,	0,896,69298,69544,70243,71049,71496,73015,73970,74323,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	218270519	218272911	chr2:218270519-218272911	0	+	218270519	218270519	8553170	2	1030,342,	0,2050,
#Partially deleted in new
chr2	218271379	218318256	chr2:218271379-218318256	0	+	218271379	218271379	8553170	2	170,302,	0,46575,
#Partially deleted in new
chr2	218274191	218292577	chr2:218274191-218292577	3	-	218275474	218282141	789624	12	1430,54,96,88,38,40,51,54,65,101,242,112,	0,1834,2812,3174,3441,3743,4323,4846,5097,5834,7748,18274,
#Partially deleted in new
chr2	218274200	218285934	chr2:218274200-218285934	1	-	218275474	218282141	789624	12	1421,54,96,88,38,40,51,54,65,101,242,172,	0,1825,2803,3165,3432,3734,4314,4837,5088,5825,7739,11562,
#Partially deleted in new
chr2	218274200	218286849	chr2:218274200-218286849	1	-	218275474	218282141	789624	13	1421,54,96,88,38,40,51,54,65,101,242,176,510,	0,1825,2803,3165,3432,3734,4314,4837,5088,5825,7739,11562,12139,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	218274200	218280992	chr2:218274200-218280992	0	-	218274200	218274200	8553170	10	1421,54,96,88,38,40,51,54,65,967,	0,1825,2803,3165,3432,3734,4314,4837,5088,5825,
#Partially deleted in new
chr2	218275005	218292513	chr2:218275005-218292513	1	-	218275474	218277661	789624	11	616,54,96,88,38,40,51,54,65,101,48,	0,1020,1998,2360,2627,2929,3509,4032,4283,5020,17460,
#Partially deleted in new
chr2	218275431	218292503	chr2:218275431-218292503	0	-	218277025	218282141	789624	11	190,54,96,88,38,40,51,54,101,242,38,	0,594,1572,1934,2201,2503,3083,3606,4594,6508,17034,
#Partially deleted in new
chr2	218277362	218282181	chr2:218277362-218282181	0	-	218277973	218282141	789624	7	91,38,40,54,65,101,242,	0,270,572,1675,1926,2663,4577,
#Deleted in new
chr2	218277800	218280081	chr2:218277800-218280081	0	-	218277800	218277800	8553170	5	174,51,54,65,56,	0,714,1237,1488,2225,
#Partially deleted in new
chr2	218277934	218290089	chr2:218277934-218290089	0	-	218277934	218282141	789624	7	40,51,54,65,101,242,124,	0,580,1103,1354,2091,4005,12031,
#Partially deleted in new
chr2	218277934	218292535	chr2:218277934-218292535	0	-	218277934	218277934	8553170	6	231,51,54,65,101,70,	0,580,1103,1354,2091,14531,
#Partially deleted in new
chr2	218277945	218282208	chr2:218277945-218282208	0	-	218277945	218282141	789624	6	29,51,54,65,101,269,	0,569,1092,1343,2080,3994,
#Deleted in new
chr2	218278408	218279539	chr2:218278408-218279539	0	-	218278408	218278408	8553170	3	157,54,251,	0,629,880,
#Partially deleted in new
chr2	218278478	218292512	chr2:218278478-218292512	0	-	218278478	218278478	8553170	6	87,54,65,101,242,47,	0,559,810,1547,3461,13987,
#Partially deleted in new
chr2	218278535	218287303	chr2:218278535-218287303	0	-	218278535	218282141	789624	6	30,54,65,101,242,97,	0,502,753,1490,3404,8671,
#Partially deleted in new
chr2	218279334	218292586	chr2:218279334-218292586	0	-	218279334	218282141	789624	5	19,101,242,176,121,	0,691,2605,6428,13131,
#Partially deleted in new
chr2	218280053	218286008	chr2:218280053-218286008	0	-	218280053	218282141	789624	3	73,242,246,	0,1886,5709,
#Partially deleted in new
chr2	218280058	218287291	chr2:218280058-218287291	0	-	218280058	218282141	789624	4	68,242,176,85,	0,1881,5704,7148,
#Partially deleted in new
chr2	218280076	218292535	chr2:218280076-218292535	0	-	218280076	218282141	789624	4	50,242,172,70,	0,1863,5686,12389,
#Partially deleted in new
chr2	218280109	218289994	chr2:218280109-218289994	0	-	218280109	218282141	789624	4	17,242,176,29,	0,1830,5653,9856,
#Deleted in new
chr2	218280124	218280188	chr2:218280124-218280188	3	-	218280124	218280124	5263520	1	64,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	218282117	218292534	chr2:218282117-218292534	0	-	218282117	218282141	789624	3	64,228,69,	0,1921,10348,
#Deleted in new
chr2	218316727	218318008	chr2:218316727-218318008	0	+	218316727	218316727	8553170	2	156,92,	0,1189,
#Partially deleted in new
chr2	218323172	218346791	chr2:218323172-218346791	1	+	218323267	218344981	789624	9	259,116,113,59,93,164,87,116,1984,	0,16610,16856,17555,18361,18808,20327,21282,21635,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	218326888	218357966	chr2:218326888-218357966	3	-	218326888	218326888	789624	4	259,156,67,53,	0,915,24271,31025,
#Partially deleted in new
chr2	218334702	218344981	chr2:218334702-218344981	1	+	218334702	218344981	789624	9	56,116,113,59,93,164,87,116,174,	0,5080,5326,6025,6831,7278,8797,9752,10105,
#Deleted in new
chr2	218340094	218340889	chr2:218340094-218340889	0	+	218340094	218340094	8553170	2	47,162,	0,633,
#Deleted in new
chr2	218341910	218341980	chr2:218341910-218341980	3	+	218341910	218341910	5263520	1	70,	0,
#Deleted in new
chr2	218354074	218354572	chr2:218354074-218354572	7	+	218354074	218354074	16724991	1	498,	0,
#Partially deleted in new
chr2	218356855	218368094	chr2:218356855-218368094	3	+	218356884	218367964	789624	10	54,93,201,56,87,168,125,77,89,373,	0,239,678,1181,3717,5879,7772,10168,10574,10866,
#Deleted in new
chr2	218356862	218357790	chr2:218356862-218357790	0	+	218356862	218356862	8553170	2	47,696,	0,232,
#Partially deleted in new
chr2	218357484	218360630	chr2:218357484-218360630	0	+	218357484	218357484	8553170	2	608,58,	0,3088,
#Partially deleted in new
chr2	218357702	218368099	chr2:218357702-218368099	0	+	218357702	218357702	8553170	6	32,107,87,77,89,378,	0,283,2870,9321,9727,10019,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	218365507	218368093	chr2:218365507-218368093	0	+	218365507	218365507	8553170	2	2011,372,	0,2214,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	218366664	218367835	chr2:218366664-218367835	3	-	218366664	218366664	789624	3	134,101,245,	0,262,926,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	218366665	218367322	chr2:218366665-218367322	0	-	218366665	218366665	8553170	2	133,396,	0,261,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	218382028	218396894	chr2:218382028-218396894	3	+	218382368	218395035	789624	15	347,143,123,120,107,71,68,156,159,90,120,150,74,154,1970,	0,931,2214,3118,4606,5131,5536,5771,7841,9169,9347,10952,12091,12603,12896,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	218382028	218396027	chr2:218382028-218396027	0	+	218382028	218382028	8553170	13	347,2307,107,71,68,156,159,90,120,1016,74,154,1103,	0,931,4606,5131,5536,5771,7841,9169,9347,10086,12091,12603,12896,
#Partially deleted in new
chr2	218382168	218386667	chr2:218382168-218386667	0	+	218382368	218385222	789624	6	207,143,47,120,74,33,	0,791,2150,2978,3243,4466,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	218382187	218396026	chr2:218382187-218396026	0	+	218382187	218382187	8553170	14	188,143,120,596,68,156,159,90,120,150,74,154,142,388,	0,772,2959,4447,5377,5612,7682,9010,9188,10793,11932,12444,12737,13451,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	218382202	218392692	chr2:218382202-218392692	0	+	218382368	218385265	789624	11	173,123,120,107,71,68,156,159,90,120,578,	0,2040,2944,4432,4957,5362,5597,7667,8995,9173,9912,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	218382247	218395323	chr2:218382247-218395323	0	+	218382368	218386659	789624	16	128,143,123,120,74,107,71,68,156,159,90,120,150,74,154,399,	0,712,1995,2899,3164,4387,4912,5317,5552,7622,8950,9128,10733,11872,12384,12677,
#Partially deleted in new
chr2	218382272	218387584	chr2:218382272-218387584	0	+	218382368	218385265	789624	5	103,120,107,71,20,	0,2874,4362,4887,5292,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	218382272	218392635	chr2:218382272-218392635	0	+	218382272	218382272	8553170	12	103,143,123,120,107,71,68,156,159,90,120,521,	0,687,1970,2874,4362,4887,5292,5527,7597,8925,9103,9842,
#Partially deleted in new
chr2	218382278	218387112	chr2:218382278-218387112	0	+	218382278	218382278	8553170	3	97,120,478,	0,2868,4356,
#Partially deleted in new
chr2	218382286	218387134	chr2:218382286-218387134	0	+	218382286	218382286	8553170	5	89,143,123,120,500,	0,673,1956,2860,4348,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	218382301	218388385	chr2:218382301-218388385	0	+	218382301	218382301	8553170	7	74,111,47,120,596,68,586,	0,658,2017,2845,4333,5263,5498,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	218383686	218388385	chr2:218383686-218388385	0	+	218383686	218383686	8553170	4	679,339,596,821,	0,1460,2948,3878,
#Partially deleted in new
chr2	218384166	218386813	chr2:218384166-218386813	0	+	218384166	218384166	8553170	3	199,120,179,	0,980,2468,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	218385154	218385574	chr2:218385154-218385574	0	+	218385154	218385154	8553170	2	112,163,	0,257,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	218389964	218391771	chr2:218389964-218391771	0	+	218389964	218389964	8553170	3	64,90,396,	0,1233,1411,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	218392589	218394635	chr2:218392589-218394635	0	+	218392589	218392589	8553170	2	541,516,	0,1530,
#Partially deleted in new
chr2	218392839	218394186	chr2:218392839-218394186	0	+	218392839	218392839	8553170	2	291,67,	0,1280,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	218398255	218404418	chr2:218398255-218404418	0	+	218398255	218398255	8553170	7	77,149,102,57,93,186,122,	0,3308,3858,4093,4779,4976,6041,
#Partially deleted in new
chr2	218398337	218404676	chr2:218398337-218404676	1	+	218398412	218404425	0	7	142,149,102,57,93,186,380,	0,3226,3776,4011,4697,4894,5959,
#Deleted in new
chr2	218398702	218400070	chr2:218398702-218400070	0	+	218398702	218398702	8553170	2	508,126,	0,1242,
#Deleted in new
chr2	218398742	218399219	chr2:218398742-218399219	3	-	218398742	218398742	8553170	1	477,	0,
#Deleted in new
chr2	218398777	218403400	chr2:218398777-218403400	0	+	218398777	218398777	8553170	6	352,149,102,57,93,169,	0,2786,3336,3571,4257,4454,
#Deleted in new
chr2	218398973	218403415	chr2:218398973-218403415	0	+	218398973	218398973	8553170	7	191,98,149,105,57,93,184,	0,403,2590,3137,3375,4061,4258,
#Partially deleted in new
chr2	218399754	218405941	chr2:218399754-218405941	3	+	218400090	218404425	0	7	403,149,105,57,93,186,1645,	0,1809,2356,2594,3280,3477,4542,
#Deleted in new
chr2	218400070	218403741	chr2:218400070-218403741	0	+	218400070	218400070	8553170	6	87,149,102,57,93,510,	0,1493,2043,2278,2964,3161,
#Deleted in new
chr2	218400132	218402431	chr2:218400132-218402431	0	+	218400132	218400132	8553170	4	25,149,105,83,	0,1431,1978,2216,
#Partially deleted in new
chr2	218400133	218404479	chr2:218400133-218404479	0	+	218400133	218404425	789624	7	24,149,102,57,117,186,183,	0,1430,1980,2215,2877,3098,4163,
#Partially deleted in new
chr2	218400307	218404479	chr2:218400307-218404479	0	+	218400307	218404425	789624	7	72,149,102,57,93,186,183,	0,1256,1806,2041,2727,2924,3989,
#Deleted in new
chr2	218400586	218401712	chr2:218400586-218401712	0	+	218400586	218400586	8553170	2	311,149,	0,977,
#Deleted in new
chr2	218400677	218402407	chr2:218400677-218402407	0	+	218400677	218402407	789624	4	276,149,102,59,	0,886,1436,1671,
#Partially deleted in new
chr2	218401061	218404773	chr2:218401061-218404773	0	+	218401061	218401061	8553170	7	54,149,102,57,93,186,477,	0,502,1052,1287,1973,2170,3235,
#Deleted in new
chr2	218401166	218403417	chr2:218401166-218403417	0	+	218401166	218401166	8553170	5	546,102,57,93,186,	0,947,1182,1868,2065,
#Partially deleted in new
chr2	218401167	218404587	chr2:218401167-218404587	0	+	218401167	218401167	8553170	7	48,149,102,57,93,186,291,	0,396,946,1181,1867,2064,3129,
#Deleted in new
chr2	218402645	218402722	chr2:218402645-218402722	3	+	218402645	218402645	5263520	1	77,	0,
#Partially deleted in new
chr2	218419091	218453295	chr2:218419091-218453295	3	+	218423778	218449336	0	20	77,86,75,197,109,111,203,79,99,154,101,138,159,180,146,145,189,69,141,4073,	0,4676,5185,6523,8873,9135,10193,10505,10757,11633,12765,12954,13701,15434,16197,17390,18032,19566,21630,30131,
#Partially deleted in new
chr2	218419120	218428255	chr2:218419120-218428255	0	+	218423778	218428255	789624	6	48,86,75,185,109,29,	0,4647,5156,6494,8844,9106,
#Partially deleted in new
chr2	218419122	218449524	chr2:218419122-218449524	1	+	218429932	218449336	789624	15	46,20,79,99,154,101,138,159,180,146,145,189,69,141,302,	0,10345,10474,10726,11602,12734,12923,13670,15403,16166,17359,18001,19535,21599,30100,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	218423764	218431216	chr2:218423764-218431216	1	+	218423778	218431042	0	9	89,75,197,109,111,203,79,99,492,	0,512,1850,4200,4462,5520,5832,6084,6960,
#Partially deleted in new
chr2	218432514	218436587	chr2:218432514-218436587	0	+	218432514	218436587	789624	5	48,159,180,146,106,	0,278,2011,2774,3967,
#Partially deleted in new
chr2	218450250	218568361	chr2:218450250-218568361	3	-	218454929	218558653	0	26	4767,139,70,116,61,167,256,142,66,165,80,118,191,124,132,162,85,98,78,173,101,172,180,64,141,184,	0,5329,6841,9539,13055,15759,24379,26589,29399,31819,35413,38053,45509,47483,47775,59728,79705,84358,95970,96668,99558,103302,108247,110569,112422,117927,
#Partially deleted in new
chr2	218453267	218568325	chr2:218453267-218568325	1	-	218454929	218558653	0	26	1750,139,70,116,61,167,256,142,66,165,80,118,191,124,132,162,85,98,78,173,101,172,220,64,141,148,	0,2312,3824,6522,10038,12742,21362,23572,26382,28802,32396,35036,42492,44466,44758,56711,76688,81341,92953,93651,96541,100285,105230,107552,109405,114910,
#Partially deleted in new
chr2	218453500	218568341	chr2:218453500-218568341	1	-	218454929	218553664	0	24	1517,139,70,116,61,167,256,142,165,80,118,191,124,132,162,85,98,78,173,101,172,64,141,164,	0,2079,3591,6289,9805,12509,21129,23339,28569,32163,34803,42259,44233,44525,56478,76455,81108,92720,93418,96308,100052,107319,109172,114677,
#Partially deleted in new
chr2	218454814	218568291	chr2:218454814-218568291	1	-	218454929	218558653	0	26	203,139,70,116,61,167,256,142,66,165,80,118,191,124,132,162,85,98,78,173,101,172,180,64,96,114,	0,765,2277,4975,8491,11195,19815,22025,24835,27255,30849,33489,40945,42919,43211,55164,75141,79794,91406,92104,94994,98738,103683,106005,107903,113363,
#Partially deleted in new
chr2	218466132	218479715	chr2:218466132-218479715	0	-	218466132	218466132	8553170	5	44,57,256,142,66,	0,7057,8497,10707,13517,
#Partially deleted in new
chr2	218474749	218476958	chr2:218474749-218476958	0	-	218474749	218474749	8553170	2	174,119,	0,2090,
#Partially deleted in new
chr2	218476942	218486378	chr2:218476942-218486378	0	-	218476942	218476942	8553170	5	39,66,165,80,263,	0,2707,5127,8721,9173,
#Partially deleted in new
chr2	218497768	218514428	chr2:218497768-218514428	0	-	218497768	218497768	8553170	4	89,132,162,169,	0,257,12210,16491,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	218500728	218501037	chr2:218500728-218501037	3	-	218500728	218500728	8553170	1	309,	0,
#Partially deleted in new
chr2	218510006	218549824	chr2:218510006-218549824	0	-	218510006	218510006	8553170	5	134,85,78,173,16,	0,19949,36214,36912,39802,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	218528270	218568326	chr2:218528270-218568326	1	-	218528754	218558653	789624	11	530,85,98,78,173,101,172,180,64,141,149,	0,1685,6338,17950,18648,21538,25282,30227,32549,34402,39907,
#Partially deleted in new
chr2	218568579	218597080	chr2:218568579-218597080	3	+	218568954	218594276	0	8	399,180,116,110,110,99,92,2973,	0,11981,14391,16032,19006,23724,24036,25528,
#Partially deleted in new
chr2	218568707	218596424	chr2:218568707-218596424	1	+	218568954	218594276	0	9	271,180,116,110,110,99,92,2191,90,	0,11853,14263,15904,18878,23596,23908,25400,27627,
#Partially deleted in new
chr2	218568858	218584656	chr2:218568858-218584656	0	+	218568954	218581018	789624	5	120,180,120,116,45,	0,11702,12136,14112,15753,
#Partially deleted in new
chr2	218568874	218593842	chr2:218568874-218593842	1	+	218568954	218593573	0	8	104,180,116,110,110,99,92,315,	0,11686,14096,15737,18711,23429,23741,24653,
#Deleted in new
chr2	218589213	218589320	chr2:218589213-218589320	3	-	218589213	218589213	8553170	1	107,	0,
#Partially deleted in new
chr2	218592303	218593072	chr2:218592303-218593072	0	+	218592303	218592303	8553170	2	99,457,	0,312,
#Partially deleted in new
chr2	218592315	218594896	chr2:218592315-218594896	0	+	218592315	218594175	789624	3	87,92,728,	0,300,1853,
#Partially deleted in new
chr2	218607764	218637181	chr2:218607764-218637181	3	+	218615739	218636577	789624	16	306,55,159,229,130,232,202,145,153,177,157,117,173,136,150,711,	0,7942,8139,10814,13705,14882,20264,21754,22885,24371,25840,26340,26693,28031,28478,28706,
#Partially deleted in new
chr2	218607854	218636648	chr2:218607854-218636648	0	+	218607854	218607854	8553170	12	216,55,159,229,130,232,177,617,173,136,150,178,	0,7852,8049,10724,13615,14792,24281,25750,26603,27941,28388,28616,
#Partially deleted in new
chr2	218607898	218621548	chr2:218607898-218621548	0	+	218615739	218618710	789624	5	172,55,56,229,79,	0,7808,8005,10680,13571,
#Partially deleted in new
chr2	218607898	218622186	chr2:218607898-218622186	0	+	218615739	218618710	789624	6	172,55,56,229,44,22,	0,7808,8005,10680,13571,14266,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	218607898	218629215	chr2:218607898-218629215	0	+	218607898	218607898	8553170	7	172,55,159,229,130,232,1187,	0,7808,8005,10680,13571,14748,20130,
#Partially deleted in new
chr2	218607915	218637173	chr2:218607915-218637173	0	+	218607915	218607915	8553170	14	155,55,56,309,232,202,145,153,177,617,173,136,150,703,	0,7791,7988,10663,14731,20113,21603,22734,24220,25689,26542,27880,28327,28555,
#Partially deleted in new
chr2	218607918	218637181	chr2:218607918-218637181	1	+	218615739	218636577	789624	17	152,55,159,229,130,232,202,145,153,177,157,117,173,136,150,108,263,	0,7788,7985,10660,13551,14728,20110,21600,22731,24217,25686,26186,26539,27877,28324,28552,29000,
#Partially deleted in new
chr2	218607918	218633880	chr2:218607918-218633880	0	+	218607918	218607918	8553170	6	152,55,229,130,18,276,	0,7788,10660,13551,24376,25686,
#Partially deleted in new
chr2	218609241	218618693	chr2:218609241-218618693	0	+	218615739	218618693	789624	4	227,55,159,115,	0,6465,6662,9337,
#Partially deleted in new
chr2	218609739	218637175	chr2:218609739-218637175	1	+	218615739	218636577	789624	17	209,55,159,229,130,232,202,145,153,177,96,157,117,173,136,150,705,	0,5967,6164,8839,11730,12907,18289,19779,20910,22396,23646,23865,24365,24718,26056,26503,26731,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	218622361	218637184	chr2:218622361-218637184	0	+	218622361	218622361	8553170	8	517,1635,153,177,617,173,136,942,	0,5667,8288,9774,11243,12096,13434,13881,
#Partially deleted in new
chr2	218629353	218633672	chr2:218629353-218633672	0	+	218629353	218629353	8553170	3	310,177,68,	0,2782,4251,
#Partially deleted in new
chr2	218630645	218634554	chr2:218630645-218634554	0	+	218630645	218634140	789624	4	157,177,117,97,	0,1490,3459,3812,
#Deleted in new
chr2	218633255	218634014	chr2:218633255-218634014	3	-	218633255	218633255	8553170	1	759,	0,
#Partially deleted in new
chr2	218633638	218636388	chr2:218633638-218636388	0	+	218633638	218633638	8553170	5	191,117,173,136,146,	0,466,819,2157,2604,
#Deleted in new
chr2	218635854	218637173	chr2:218635854-218637173	0	+	218635854	218636577	789624	4	77,150,108,314,	0,388,616,1005,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	218637915	218659524	chr2:218637915-218659524	1	-	218638338	218656429	789624	10	893,106,3037,178,825,168,314,176,56,156,	0,2748,4112,8255,10719,12443,18234,20785,21064,21453,
#Partially deleted in new
chr2	218637920	218659540	chr2:218637920-218659540	3	-	218638338	218656429	789624	9	888,106,3037,178,825,168,314,197,213,	0,2743,4107,8250,10714,12438,18229,20780,21407,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	218638144	218659502	chr2:218638144-218659502	0	-	218651805	218656429	789624	11	664,106,3037,178,825,168,122,314,101,151,134,	0,2519,3883,8026,10490,12214,13556,18005,20556,20835,21224,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	218638144	218659655	chr2:218638144-218659655	0	-	218651805	218656429	789624	11	664,106,3037,178,825,168,122,314,176,151,287,	0,2519,3883,8026,10490,12214,13556,18005,20556,20835,21224,
#Partially deleted in new
chr2	218650500	218656403	chr2:218650500-218656403	0	-	218650500	218656403	789624	3	26,600,254,	0,1200,5649,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	218656349	218659476	chr2:218656349-218659476	0	-	218656349	218656429	789624	3	114,151,108,	0,2630,3019,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	218656386	218659539	chr2:218656386-218659539	0	-	218656386	218656429	789624	3	77,176,560,	0,2314,2593,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	218658763	218661217	chr2:218658763-218661217	0	+	218660987	218661217	789624	3	410,115,279,	0,1543,2175,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	218658804	218661916	chr2:218658804-218661916	0	+	218660987	218661916	789624	4	369,369,140,158,	0,2134,2601,2954,
#Deleted in new
chr2	218659375	218661916	chr2:218659375-218661916	0	+	218660987	218661916	789624	4	148,369,140,158,	0,1563,2030,2383,
#Deleted in new
chr2	218659655	218663443	chr2:218659655-218663443	3	+	218660987	218663386	789624	8	88,369,140,195,64,170,118,310,	0,1283,1750,2103,2541,2854,3227,3478,
#Deleted in new
chr2	218659655	218662602	chr2:218659655-218662602	0	+	218661445	218662602	789624	5	88,140,195,64,93,	0,1750,2103,2541,2854,
#Deleted in new
chr2	218659658	218660598	chr2:218659658-218660598	0	+	218659658	218659658	8553170	2	85,562,	0,378,
#Deleted in new
chr2	218659708	218663443	chr2:218659708-218663443	1	+	218660987	218663386	789624	9	35,182,369,140,195,64,170,118,310,	0,328,1230,1697,2050,2488,2801,3174,3425,
#Deleted in new
chr2	218659713	218663442	chr2:218659713-218663442	1	+	218660987	218663386	789624	9	30,130,369,140,195,64,170,118,309,	0,323,1225,1692,2045,2483,2796,3169,3420,
#Deleted in new
chr2	218659716	218661416	chr2:218659716-218661416	0	+	218660987	218661416	789624	4	27,176,369,11,	0,590,1222,1689,
#Deleted in new
chr2	218659734	218663443	chr2:218659734-218663443	1	+	218660987	218663386	789624	9	9,209,369,140,195,64,170,118,310,	0,302,1204,1671,2024,2462,2775,3148,3399,
#Deleted in new
chr2	218659736	218663443	chr2:218659736-218663443	1	+	218660987	218663386	789624	8	64,369,140,195,64,170,118,310,	0,1202,1669,2022,2460,2773,3146,3397,
#Deleted in new
chr2	218659759	218663404	chr2:218659759-218663404	1	+	218660987	218663386	789624	9	41,115,369,140,195,64,170,118,271,	0,547,1179,1646,1999,2437,2750,3123,3374,
#Deleted in new
chr2	218659771	218663442	chr2:218659771-218663442	1	+	218660987	218663386	789624	8	650,369,140,195,64,170,118,309,	0,1167,1634,1987,2425,2738,3111,3362,
#Deleted in new
chr2	218660036	218661544	chr2:218660036-218661544	0	+	218660987	218661544	789624	4	182,176,369,139,	0,270,902,1369,
#Deleted in new
chr2	218660866	218661514	chr2:218660866-218661514	0	+	218660866	218660866	8553170	2	441,109,	0,539,
#Deleted in new
chr2	218661063	218662540	chr2:218661063-218662540	0	+	218661063	218661063	8553170	4	457,195,64,31,	0,695,1133,1446,
#Deleted in new
chr2	218661665	218663413	chr2:218661665-218663413	0	+	218661665	218661665	8553170	5	288,64,165,118,280,	0,531,849,1217,1468,
#Deleted in new
chr2	218661850	218663414	chr2:218661850-218663414	0	+	218661850	218661850	8553170	4	103,483,118,281,	0,346,1032,1283,
#Deleted in new
chr2	218661917	218663441	chr2:218661917-218663441	0	+	218661917	218661917	8553170	4	36,64,118,308,	0,279,965,1216,
#Deleted in new
chr2	218661949	218663442	chr2:218661949-218663442	0	+	218661949	218663386	789624	5	4,64,165,118,309,	0,247,565,933,1184,
#Deleted in new
chr2	218662196	218663442	chr2:218662196-218663442	0	+	218662196	218663255	789624	4	64,170,118,200,	0,313,686,1046,
#Partially deleted in new
chr2	218663863	218672411	chr2:218663863-218672411	3	-	218663956	218671970	0	10	672,135,93,144,72,70,68,103,75,482,	0,875,1291,2052,2295,4048,4215,4375,4741,8066,
#Partially deleted in new
chr2	218663891	218671977	chr2:218663891-218671977	0	-	218663891	218663891	8553170	8	644,135,93,144,72,70,601,48,	0,847,1263,2024,2267,4020,4187,8038,
#Deleted in new
chr2	218664166	218664901	chr2:218664166-218664901	0	-	218664166	218664166	8553170	2	369,163,	0,572,
#Partially deleted in new
chr2	218664826	218671984	chr2:218664826-218671984	0	-	218664826	218664826	8553170	9	47,93,169,72,70,68,103,75,55,	0,328,1089,1332,3085,3252,3412,3778,7103,
#Partially deleted in new
chr2	218665153	218671967	chr2:218665153-218671967	0	-	218665968	218671967	789624	8	94,144,72,70,68,63,75,38,	0,762,1005,2758,2925,3125,3451,6776,
#Partially deleted in new
chr2	218665931	218668168	chr2:218665931-218668168	0	-	218665931	218665931	8553170	4	153,72,70,90,	0,227,1980,2147,
#Partially deleted in new
chr2	218672025	218702715	chr2:218672025-218702715	3	+	218672829	218702009	789624	27	190,173,141,78,131,250,94,170,188,100,144,180,98,106,151,128,105,99,89,64,111,75,175,148,148,747,850,	0,715,1599,1853,3317,4003,7142,7534,7867,8577,13059,16671,17833,18424,20117,20557,21214,21697,21869,22238,22499,24501,25013,25437,25828,26576,29840,
#Partially deleted in new
chr2	218672068	218702709	chr2:218672068-218702709	1	+	218672829	218702009	789624	27	147,173,141,78,131,250,94,170,188,100,144,180,98,106,151,128,105,99,89,64,111,12,175,148,148,747,844,	0,672,1556,1810,3274,3960,7099,7491,7824,8534,13016,16628,17790,18381,20074,20514,21171,21654,21826,22195,22456,24521,24970,25394,25785,26533,29797,
#Partially deleted in new
chr2	218672070	218675428	chr2:218672070-218675428	0	+	218673702	218675428	789624	5	145,173,101,78,86,	0,670,1594,1808,3272,
#Partially deleted in new
chr2	218672295	218702623	chr2:218672295-218702623	1	+	218672829	218702009	789624	27	70,173,141,78,131,250,94,170,188,100,144,180,98,106,151,128,105,99,89,64,111,75,175,148,148,747,758,	0,445,1329,1583,3047,3733,6872,7264,7597,8307,12789,16401,17563,18154,19847,20287,20944,21427,21599,21968,22229,24231,24743,25167,25558,26306,29570,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	218672320	218673253	chr2:218672320-218673253	0	+	218672320	218672320	8553170	2	45,513,	0,420,
#Partially deleted in new
chr2	218672338	218675391	chr2:218672338-218675391	0	+	218672338	218672338	8553170	5	27,277,141,78,49,	0,402,1286,1540,3004,
#Partially deleted in new
chr2	218672342	218679617	chr2:218672342-218679617	0	+	218672829	218679617	789624	8	23,103,141,78,131,250,94,58,	0,468,1282,1536,3000,3686,6825,7217,
#Partially deleted in new
chr2	218680049	218689863	chr2:218680049-218689863	0	+	218680049	218688435	789624	6	31,100,144,103,180,5,	0,553,5035,8341,8647,9809,
#Partially deleted in new
chr2	218680692	218690527	chr2:218680692-218690527	0	+	218680692	218688435	789624	6	10,144,103,180,71,78,	0,4392,7698,8004,9193,9757,
#Partially deleted in new
chr2	218684733	218688781	chr2:218684733-218688781	0	+	218684733	218684733	8553170	2	495,85,	0,3963,
#Partially deleted in new
chr2	218688836	218692550	chr2:218688836-218692550	0	+	218688836	218688836	8553170	4	40,98,106,408,	0,1022,1613,3306,
#Deleted in new
chr2	218692426	218694278	chr2:218692426-218694278	0	+	218692426	218692426	8553170	5	284,105,99,89,15,	0,813,1296,1468,1837,
#Partially deleted in new
chr2	218693295	218697190	chr2:218693295-218697190	0	+	218693295	218693295	8553170	7	49,99,89,64,111,166,152,	0,427,599,968,1229,3294,3743,
#Partially deleted in new
chr2	218694523	218696960	chr2:218694523-218696960	0	+	218694523	218694523	8553170	2	112,434,	0,2003,
#Partially deleted in new
chr2	218696528	218702716	chr2:218696528-218702716	0	+	218696528	218697951	789624	6	73,175,148,99,747,851,	0,510,934,1374,2073,5337,
#Deleted in new
chr2	218697027	218698701	chr2:218697027-218698701	0	+	218697027	218697027	8553170	4	186,148,148,100,	0,435,826,1574,
#Partially deleted in new
chr2	218710844	218754693	chr2:218710844-218754693	1	+	218738171	218754303	789624	19	147,1256,110,64,125,111,77,192,83,129,123,99,135,138,103,211,71,86,463,	0,27063,29213,29676,34264,34846,35310,36158,36445,36752,37260,37991,38408,39164,40859,41918,42270,42739,43386,
#Partially deleted in new
chr2	218710911	218738199	chr2:218710911-218738199	0	+	218737676	218738199	789624	2	126,621,	0,26667,
#Partially deleted in new
chr2	218737573	218755416	chr2:218737573-218755416	1	+	218737676	218754389	0	18	1590,110,64,125,111,77,192,83,129,123,99,135,138,103,211,71,86,1283,	0,2484,2947,7535,8117,8581,9429,9716,10023,10531,11262,11679,12435,14130,15189,15541,16010,16560,
#Partially deleted in new
chr2	218745116	218748897	chr2:218745116-218748897	0	+	218745116	218747638	789624	7	117,111,77,192,129,123,62,	0,574,1038,1886,2480,2988,3719,
#Deleted in new
chr2	218745386	218746329	chr2:218745386-218746329	0	+	218745386	218745386	8553170	2	415,175,	0,768,
#Deleted in new
chr2	218745552	218748203	chr2:218745552-218748203	0	+	218745552	218745552	8553170	6	249,77,192,83,129,99,	0,602,1450,1737,2044,2552,
#Partially deleted in new
chr2	218745994	218749362	chr2:218745994-218749362	0	+	218745994	218745994	8553170	7	237,192,83,129,123,99,110,	0,1008,1295,1602,2110,2841,3258,
#Partially deleted in new
chr2	218746095	218749282	chr2:218746095-218749282	0	+	218746095	218746095	8553170	7	136,165,83,129,123,99,30,	0,934,1194,1501,2009,2740,3157,
#Deleted in new
chr2	218746131	218747584	chr2:218746131-218747584	0	+	218746131	218746131	8553170	3	100,192,295,	0,871,1158,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	218746138	218748654	chr2:218746138-218748654	0	+	218746138	218746138	8553170	2	1056,1365,	0,1151,
#Partially deleted in new
chr2	218746150	218753354	chr2:218746150-218753354	0	+	218746150	218746150	8553170	10	81,192,83,142,123,99,135,138,103,592,	0,852,1139,1446,1954,2685,3102,3858,5553,6612,
#Partially deleted in new
chr2	218746154	218748919	chr2:218746154-218748919	0	+	218746154	218748137	789624	4	77,192,123,84,	0,848,1950,2681,
#Deleted in new
chr2	218746760	218747668	chr2:218746760-218747668	0	+	218746760	218746760	8553170	3	434,83,72,	0,529,836,
#Partially deleted in new
chr2	218747033	218749363	chr2:218747033-218749363	0	+	218747033	218749363	789624	5	161,83,129,99,111,	0,256,563,1802,2219,
#Partially deleted in new
chr2	218748901	218754220	chr2:218748901-218754220	0	+	218748901	218754220	789624	8	33,135,138,103,85,71,86,87,	0,351,1107,2802,3861,4213,4682,5232,
#Partially deleted in new
chr2	218751753	218754416	chr2:218751753-218754416	0	+	218751753	218754303	789624	5	53,211,65,86,186,	0,1009,1367,1830,2477,
#Deleted in new
chr2	218753097	218754503	chr2:218753097-218754503	0	+	218753097	218753097	8553170	3	88,86,370,	0,486,1036,
#Partially deleted in new
chr2	218781748	218815288	chr2:218781748-218815288	0	+	218781748	218781748	8553170	7	689,191,200,198,173,737,378,	0,27828,30473,30803,31175,32272,33162,
#Partially deleted in new
chr2	218781755	218815293	chr2:218781755-218815293	3	+	218782182	218815030	0	9	682,191,200,198,173,167,79,213,383,	0,27821,30466,30796,31168,32265,32624,32789,33155,
#Partially deleted in new
chr2	218782152	218814067	chr2:218782152-218814067	0	+	218782182	218812314	789624	5	285,200,198,173,47,	0,30069,30399,30771,31868,
#Partially deleted in new
chr2	218782173	218814091	chr2:218782173-218814091	0	+	218782173	218782173	8553170	3	264,875,71,	0,30048,31847,
#Partially deleted in new
chr2	218805913	218813025	chr2:218805913-218813025	0	+	218809603	218813025	789624	5	108,191,200,198,102,	0,3663,6308,6638,7010,
#Deleted in new
chr2	218818689	218819144	chr2:218818689-218819144	3	+	218818689	218818689	8553170	1	455,	0,
#Partially deleted in new
chr2	218822382	218831816	chr2:218822382-218831816	0	-	218823761	218831770	789624	14	694,233,147,38,166,127,55,46,59,82,404,156,40,79,	0,1263,1839,2156,4545,4864,5192,5450,5621,6136,7595,8363,8953,9355,
#Partially deleted in new
chr2	218822382	218831791	chr2:218822382-218831791	3	-	218823761	218831770	789624	14	694,233,147,38,166,127,55,46,59,82,404,156,40,54,	0,1263,1839,2156,4545,4864,5192,5450,5621,6136,7595,8363,8953,9355,
#Deleted in new
chr2	218823089	218823154	chr2:218823089-218823154	3	+	218823089	218823089	5263520	1	65,	0,
#Partially deleted in new
chr2	218823325	218832086	chr2:218823325-218832086	1	-	218823761	218831770	789624	13	553,147,38,166,127,55,46,59,82,404,156,40,349,	0,896,1213,3602,3921,4249,4507,4678,5193,6652,7420,8010,8412,
#Partially deleted in new
chr2	218824362	218831803	chr2:218824362-218831803	0	-	218826987	218831770	789624	11	6,38,166,127,55,59,82,404,156,40,66,	0,176,2565,2884,3212,3641,4156,5615,6383,6973,7375,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	218826634	218831803	chr2:218826634-218831803	0	-	218826634	218826634	8553170	9	459,127,55,230,82,404,156,40,66,	0,612,940,1198,1884,3343,4111,4701,5103,
#Partially deleted in new
chr2	218830298	218831801	chr2:218830298-218831801	0	-	218830298	218831770	789624	4	83,144,40,64,	0,459,1037,1439,
#Deleted in new
chr2	218841598	218842065	chr2:218841598-218842065	7	+	218841598	218841598	16724991	1	467,	0,
#Partially deleted in new
chr2	218859820	218874233	chr2:218859820-218874233	3	+	218860037	218873845	789624	4	297,221,335,850,	0,11206,11664,13563,
#Partially deleted in new
chr2	218859964	218871739	chr2:218859964-218871739	0	+	218859964	218859964	8553170	2	153,255,	0,11520,
#Partially deleted in new
chr2	218880362	218893931	chr2:218880362-218893931	3	+	218880995	218893271	789624	4	746,263,380,1158,	0,1798,9621,12411,
#Partially deleted in new
chr2	218882160	218893146	chr2:218882160-218893146	0	+	218882160	218893146	789624	2	263,373,	0,10613,
#Partially deleted in new
chr2	218883849	218890099	chr2:218883849-218890099	0	+	218883849	218883849	8553170	2	474,116,	0,6134,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	218893220	218899581	chr2:218893220-218899581	0	+	218893220	218893220	8553170	2	47,391,	0,5970,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	218900810	218930636	chr2:218900810-218930636	3	-	218900810	218900810	789624	5	361,208,71,92,279,	0,6028,20879,26352,29547,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	218916183	218916287	chr2:218916183-218916287	3	-	218916183	218916183	8553170	1	104,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	218944628	218961903	chr2:218944628-218961903	3	-	218944628	218944628	8553170	2	508,45,	0,17230,
#Deleted in new
chr2	218953400	218954050	chr2:218953400-218954050	7	-	218953400	218953400	16724991	1	650,	0,
#Deleted in new
chr2	218959654	218962162	chr2:218959654-218962162	3	+	218959820	218960924	789624	1	2508,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	218975392	218977966	chr2:218975392-218977966	1	+	218975392	218975392	8553170	3	459,1310,485,	0,696,2089,
#Deleted in new
chr2	218975598	218976736	chr2:218975598-218976736	0	+	218975598	218975598	8553170	2	151,109,	0,1029,
#Deleted in new
chr2	218976232	218976747	chr2:218976232-218976747	0	+	218976232	218976232	8553170	2	296,117,	0,398,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	218976283	218979660	chr2:218976283-218979660	1	+	218976283	218976283	8553170	2	639,2179,	0,1198,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	218977541	218979620	chr2:218977541-218979620	0	+	218977541	218977541	8553170	2	79,356,	0,1723,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	218977824	218979609	chr2:218977824-218979609	0	+	218977824	218977824	8553170	2	166,345,	0,1440,
#Deleted in new
chr2	218981086	218985657	chr2:218981086-218985657	3	-	218981666	218985075	0	3	1170,75,634,	0,3144,3937,
#Deleted in new
chr2	218981957	218984475	chr2:218981957-218984475	0	-	218981957	218981957	8553170	2	299,245,	0,2273,
#Deleted in new
chr2	218990188	218993421	chr2:218990188-218993421	3	-	218990251	218993176	789624	5	211,143,142,165,47,	0,663,1913,2827,3186,
#Deleted in new
chr2	218990189	218993413	chr2:218990189-218993413	1	-	218990251	218993176	789624	4	210,143,142,398,	0,662,1912,2826,
#Deleted in new
chr2	218990189	218991496	chr2:218990189-218991496	0	-	218990189	218990189	8553170	3	210,143,84,	0,662,1223,
#Deleted in new
chr2	218990189	218991207	chr2:218990189-218991207	0	-	218990189	218990189	8553170	2	210,356,	0,662,
#Deleted in new
chr2	218990911	218993401	chr2:218990911-218993401	0	-	218990911	218993176	789624	4	83,142,241,27,	0,1190,2104,2463,
#Deleted in new
chr2	218991846	218993178	chr2:218991846-218993178	0	-	218991846	218991846	8553170	2	397,163,	0,1169,
#Deleted in new
chr2	219001644	219001708	chr2:219001644-219001708	3	-	219001644	219001644	5263520	1	64,	0,
#Partially deleted in new
chr2	219002214	219015721	chr2:219002214-219015721	3	+	219002214	219002214	789624	3	86,86,1820,	0,7742,11687,
#Partially deleted in new
chr2	219002845	219041523	chr2:219002845-219041523	3	-	219002936	219039048	789624	35	176,138,504,129,203,45,108,114,144,159,192,111,67,177,129,214,129,151,159,225,246,138,360,201,266,223,146,200,170,103,185,204,155,46,36,	0,289,1106,2588,3175,3619,6201,6501,7096,7700,7959,10413,10673,11022,16205,16660,18306,18934,19325,20361,21169,23176,24804,25355,26557,27140,27843,28260,28643,29624,32634,35529,36050,37673,38642,
#Partially deleted in new
chr2	219002846	219039057	chr2:219002846-219039057	1	-	219002936	219039048	789624	33	175,138,504,129,203,45,108,114,144,159,192,111,67,177,129,214,129,151,159,225,246,138,360,201,266,223,146,200,170,103,185,204,162,	0,288,1105,2587,3174,3618,6200,6500,7095,7699,7958,10412,10672,11021,16204,16659,18305,18933,19324,20360,21168,23175,24803,25354,26556,27139,27842,28259,28642,29623,32633,35528,36049,
#Partially deleted in new
chr2	219018255	219019704	chr2:219018255-219019704	0	-	219018995	219019704	789624	2	924,199,	0,1250,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	219026547	219041527	chr2:219026547-219041527	0	-	219026547	219026547	8553170	11	1462,201,806,146,200,103,185,204,49,46,40,	0,1653,2855,4141,4558,5922,8932,11827,12348,13971,14940,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	219026549	219039006	chr2:219026549-219039006	1	-	219027472	219029480	789624	9	1460,201,806,146,200,103,185,204,111,	0,1651,2853,4139,4556,5920,8930,11825,12346,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	219026549	219029801	chr2:219026549-219029801	0	-	219026549	219026549	8553170	3	1460,214,399,	0,1651,2853,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	219026646	219039215	chr2:219026646-219039215	0	-	219026646	219026646	8553170	5	1363,201,806,185,841,	0,1554,2756,8833,11728,
#Partially deleted in new
chr2	219027062	219041516	chr2:219027062-219041516	1	-	219027472	219041512	789624	13	947,201,266,223,146,200,170,103,185,204,49,46,29,	0,1138,2340,2923,3626,4043,4426,5407,8417,11312,11833,13456,14425,
#Partially deleted in new
chr2	219027079	219041516	chr2:219027079-219041516	1	-	219027472	219038536	789624	12	930,201,266,223,146,200,170,103,185,204,46,29,	0,1121,2323,2906,3609,4026,4409,5390,8400,11295,13439,14408,
#Partially deleted in new
chr2	219031105	219041516	chr2:219031105-219041516	0	-	219031105	219041512	789624	7	91,103,185,204,49,46,29,	0,1364,4374,7269,7790,9413,10382,
#Partially deleted in new
chr2	219032567	219041516	chr2:219032567-219041516	0	-	219032567	219038536	789624	6	5,185,204,47,46,29,	0,2912,5807,6328,7951,8920,
#Partially deleted in new
chr2	219033691	219041523	chr2:219033691-219041523	1	-	219035331	219038536	789624	4	1973,204,46,36,	0,4683,6827,7796,
#Partially deleted in new
chr2	219035483	219041504	chr2:219035483-219041504	0	-	219035483	219038536	789624	5	181,204,49,46,82,	0,2891,3412,5035,5939,
#Deleted in new
chr2	219054419	219060467	chr2:219054419-219060467	3	-	219055206	219060467	0	3	1446,262,315,	0,3013,5733,
#Deleted in new
chr2	219058687	219058750	chr2:219058687-219058750	3	-	219058687	219058687	5263520	1	63,	0,
#Deleted in new
chr2	219069353	219069809	chr2:219069353-219069809	3	-	219069353	219069353	8553170	1	456,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	219075316	219158362	chr2:219075316-219158362	1	-	219076319	219158362	0	7	1129,119,118,59,139,213,177,	0,1929,2772,71363,72340,82155,82869,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	219075320	219160853	chr2:219075320-219160853	3	-	219076380	219158362	0	8	1135,119,118,59,139,213,177,134,	0,1925,2768,71359,72336,82151,82865,85399,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	219075328	219160798	chr2:219075328-219160798	0	-	219078177	219158362	789624	9	1127,119,118,82,59,139,213,177,79,	0,1917,2760,19945,71351,72328,82143,82857,85391,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	219075328	219170827	chr2:219075328-219170827	0	-	219075328	219075328	8553170	17	1127,119,118,82,59,139,213,177,100,96,168,106,115,124,74,98,1307,	0,1917,2760,19945,71351,72328,82143,82857,86776,86970,88059,88904,92601,92866,93700,93980,94192,
#Partially deleted in new
chr2	219075972	219169987	chr2:219075972-219169987	3	-	219169377	219169984	789624	17	483,119,118,59,139,213,177,100,96,116,115,124,414,88,98,121,165,	0,1273,2116,70707,71684,81499,82213,86132,86326,87415,91957,92222,92447,93042,93336,93585,93850,
#Partially deleted in new
chr2	219076291	219124764	chr2:219076291-219124764	0	-	219076291	219076291	8553170	4	164,119,118,154,	0,954,1797,48319,
#Partially deleted in new
chr2	219076302	219157621	chr2:219076302-219157621	0	-	219076380	219157621	789624	6	153,119,133,59,139,150,	0,943,1771,70377,71354,81169,
#Partially deleted in new
chr2	219076317	219125652	chr2:219076317-219125652	0	-	219076317	219076317	8553170	4	138,119,133,182,	0,928,1756,49153,
#Partially deleted in new
chr2	219076377	219125660	chr2:219076377-219125660	0	-	219076377	219076377	8553170	5	78,119,118,82,190,	0,868,1711,18896,49093,
#Partially deleted in new
chr2	219078106	219160555	chr2:219078106-219160555	0	-	219078106	219158362	789624	6	100,59,139,213,177,46,	0,68573,69550,79365,80079,82403,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	219102433	219102719	chr2:219102433-219102719	3	+	219102433	219102433	8553170	1	286,	0,
#Partially deleted in new
chr2	219146706	219160865	chr2:219146706-219160865	0	-	219157548	219158362	789624	5	32,139,86,144,146,	0,950,10765,11512,14013,
#Deleted in new
chr2	219158819	219160762	chr2:219158819-219160762	0	-	219158819	219158819	8553170	2	512,43,	0,1900,
#Partially deleted in new
chr2	219161464	219170095	chr2:219161464-219170095	1	-	219161908	219169984	789624	11	740,96,168,106,49,93,182,74,98,158,273,	0,834,1923,2768,6465,6730,7187,7564,7844,8056,8358,
#Partially deleted in new
chr2	219161764	219170017	chr2:219161764-219170017	1	-	219161908	219169984	789624	12	440,96,168,106,254,115,124,182,74,98,158,195,	0,534,1623,2468,3404,6165,6430,6887,7264,7544,7756,8058,
#Partially deleted in new
chr2	219161765	219170032	chr2:219161765-219170032	3	-	219161908	219169984	789624	12	439,96,168,106,254,115,124,182,74,122,158,210,	0,533,1622,2467,3403,6164,6429,6886,7263,7519,7755,8057,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	219164577	219170057	chr2:219164577-219170057	0	-	219164577	219164577	8553170	6	845,904,74,98,65,235,	0,3352,4451,4731,4943,5245,
#Deleted in new
chr2	219167928	219169562	chr2:219167928-219169562	0	-	219169377	219169562	789624	6	116,124,186,74,98,5,	0,266,719,1100,1380,1629,
#Deleted in new
chr2	219168213	219169990	chr2:219168213-219169990	0	-	219168213	219169984	789624	6	105,182,74,98,158,168,	0,438,815,1095,1307,1609,
#Deleted in new
chr2	219168636	219170033	chr2:219168636-219170033	0	-	219168636	219168636	8553170	5	197,74,98,102,39,	0,392,672,884,1358,
#Deleted in new
chr2	219168651	219170004	chr2:219168651-219170004	0	-	219168651	219169984	789624	4	182,74,121,182,	0,377,906,1171,
#Deleted in new
chr2	219168783	219170035	chr2:219168783-219170035	0	-	219168783	219168783	8553170	5	50,74,98,102,213,	0,245,525,737,1039,
#Deleted in new
chr2	219169354	219170029	chr2:219169354-219170029	0	-	219169354	219169354	8553170	2	324,207,	0,468,
#Partially deleted in new
chr2	219171896	219176966	chr2:219171896-219176966	1	-	219172585	219176828	789624	8	1232,118,62,129,121,82,109,207,	0,1453,2249,2881,3091,3694,4326,4863,
#Partially deleted in new
chr2	219172173	219178106	chr2:219172173-219178106	3	-	219172585	219176828	789624	9	955,118,62,129,121,82,109,88,409,	0,1176,1972,2604,2814,3417,4049,4586,5524,
#Partially deleted in new
chr2	219172893	219177313	chr2:219172893-219177313	0	-	219172893	219176828	789624	9	235,118,62,129,121,82,109,88,210,	0,456,1252,1884,2094,2697,3329,3866,4210,
#Partially deleted in new
chr2	219173050	219176898	chr2:219173050-219176898	0	-	219173050	219176828	789624	7	78,118,62,331,82,109,139,	0,299,1095,1727,2540,3172,3709,
#Deleted in new
chr2	219176224	219182120	chr2:219176224-219182120	0	+	219180735	219182120	789624	9	150,107,31,136,85,144,95,136,108,	0,2697,3508,3885,4445,4837,5144,5415,5788,
#Deleted in new
chr2	219177922	219180751	chr2:219177922-219180751	0	+	219180735	219180751	8553170	5	202,107,31,136,82,	0,999,1810,2187,2747,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	219178216	219185479	chr2:219178216-219185479	3	+	219178352	219182629	789624	9	417,107,31,136,85,144,95,136,3467,	0,705,1516,1893,2453,2845,3152,3423,3796,
#Deleted in new
chr2	219178226	219183492	chr2:219178226-219183492	0	+	219178352	219180739	789624	9	407,107,31,48,85,144,95,136,1480,	0,695,1506,1971,2443,2835,3142,3413,3786,
#Deleted in new
chr2	219178276	219180754	chr2:219178276-219180754	0	+	219178352	219179760	789624	4	357,31,136,85,	0,1456,1833,2393,
#Deleted in new
chr2	219178713	219180750	chr2:219178713-219180750	0	+	219180735	219180750	8553170	4	315,31,136,81,	0,1019,1396,1956,
#Deleted in new
chr2	219178726	219181663	chr2:219178726-219181663	0	+	219180735	219181663	789624	7	302,31,48,85,144,95,24,	0,1006,1471,1943,2335,2642,2913,
#Deleted in new
chr2	219178985	219180239	chr2:219178985-219180239	0	+	219178985	219178985	8553170	2	43,507,	0,747,
#Deleted in new
chr2	219180667	219181693	chr2:219180667-219181693	0	+	219180667	219180667	8553170	3	87,402,54,	0,394,972,
#Deleted in new
chr2	219181677	219183800	chr2:219181677-219183800	0	+	219181677	219182629	789624	3	98,296,1387,	0,335,736,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	219195236	219207421	chr2:219195236-219207421	0	+	219206987	219207421	789624	5	133,211,226,76,95,	0,5195,8556,11730,12090,
#Deleted in new
chr2	219206783	219208900	chr2:219206783-219208900	1	+	219206987	219208352	0	6	62,73,95,132,152,645,	0,186,543,864,1103,1472,
#Deleted in new
chr2	219206783	219209651	chr2:219206783-219209651	3	+	219206987	219209306	0	10	62,73,95,132,152,93,61,68,73,390,	0,186,543,864,1103,1472,1642,1788,2193,2478,
#Deleted in new
chr2	219206783	219209651	chr2:219206783-219209651	1	+	219206987	219209306	789624	9	62,76,95,152,93,61,68,73,390,	0,183,543,1103,1472,1642,1788,2193,2478,
#Deleted in new
chr2	219206792	219209651	chr2:219206792-219209651	1	+	219206987	219209306	0	9	250,95,132,152,93,61,68,73,390,	0,534,855,1094,1463,1633,1779,2184,2469,
#Deleted in new
chr2	219206792	219209647	chr2:219206792-219209647	1	+	219206987	219208352	0	5	250,95,132,152,1392,	0,534,855,1094,1463,
#Deleted in new
chr2	219206803	219208540	chr2:219206803-219208540	0	+	219206987	219208540	789624	7	42,76,95,132,152,93,115,	0,163,523,844,1083,1452,1622,
#Deleted in new
chr2	219206806	219209606	chr2:219206806-219209606	1	+	219206987	219208576	789624	7	39,73,95,132,152,93,1181,	0,163,520,841,1080,1449,1619,
#Deleted in new
chr2	219206806	219208116	chr2:219206806-219208116	1	+	219206987	219208042	789624	5	39,73,95,132,230,	0,163,520,841,1080,
#Deleted in new
chr2	219206806	219207776	chr2:219206806-219207776	0	+	219206806	219206806	8553170	3	39,73,450,	0,163,520,
#Deleted in new
chr2	219206808	219209418	chr2:219206808-219209418	1	+	219206987	219209306	0	10	37,76,95,132,152,93,61,68,73,157,	0,158,518,839,1078,1447,1617,1763,2168,2453,
#Deleted in new
chr2	219206811	219208875	chr2:219206811-219208875	0	+	219206811	219206811	8553170	6	34,73,95,152,231,304,	0,158,515,1075,1444,1760,
#Deleted in new
chr2	219206814	219208696	chr2:219206814-219208696	1	+	219206987	219208658	789624	7	228,95,132,152,93,61,125,	0,512,833,1072,1441,1611,1757,
#Deleted in new
chr2	219206847	219208003	chr2:219206847-219208003	0	+	219206847	219206847	8553170	4	195,95,127,117,	0,479,800,1039,
#Deleted in new
chr2	219206874	219208262	chr2:219206874-219208262	1	+	219206987	219208042	789624	4	168,95,132,376,	0,452,773,1012,
#Deleted in new
chr2	219206879	219208018	chr2:219206879-219208018	0	+	219206879	219206879	8553170	2	163,692,	0,447,
#Deleted in new
chr2	219206881	219208861	chr2:219206881-219208861	0	+	219206987	219207900	789624	6	161,95,127,152,93,436,	0,445,766,1005,1374,1544,
#Deleted in new
chr2	219207084	219209647	chr2:219207084-219209647	0	+	219207084	219207084	8553170	6	337,132,152,93,61,1076,	0,563,802,1171,1341,1487,
#Deleted in new
chr2	219207217	219208613	chr2:219207217-219208613	0	+	219207217	219207217	8553170	5	204,132,93,61,42,	0,430,1038,1208,1354,
#Deleted in new
chr2	219207262	219209494	chr2:219207262-219209494	0	+	219207262	219207262	8553170	8	159,132,152,93,61,68,73,233,	0,385,624,993,1163,1309,1714,1999,
#Deleted in new
chr2	219208457	219209648	chr2:219208457-219209648	0	+	219208457	219209622	789624	3	29,68,387,	0,114,804,
#Partially deleted in new
chr2	219209765	219219017	chr2:219209765-219219017	3	-	219209937	219218673	0	19	281,69,95,113,175,105,58,86,64,77,126,66,110,122,184,102,181,138,893,	0,464,615,945,1168,2621,3242,3475,3673,3824,4060,4355,4623,5195,6231,6598,6886,7904,8359,
#Partially deleted in new
chr2	219209771	219218994	chr2:219209771-219218994	1	-	219209937	219218673	0	18	275,69,95,113,175,105,58,86,64,77,126,66,110,122,184,102,181,870,	0,458,609,939,1162,2615,3236,3469,3667,3818,4054,4349,4617,5189,6225,6592,6880,8353,
#Partially deleted in new
chr2	219209771	219222738	chr2:219209771-219222738	3	-	219220446	219222738	789624	22	275,69,95,113,105,58,86,64,77,126,66,110,122,184,469,138,2328,146,223,118,179,94,	0,458,609,939,2615,3236,3469,3667,3818,4054,4349,4617,5189,6225,6592,7898,8353,10975,11308,12278,12500,12873,
#Deleted in new
chr2	219209771	219211108	chr2:219209771-219211108	0	-	219209771	219209771	8553170	4	275,69,443,175,	0,458,609,1162,
#Deleted in new
chr2	219209771	219211039	chr2:219209771-219211039	0	-	219209771	219209771	8553170	4	275,69,95,329,	0,458,609,939,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	219209771	219215885	chr2:219209771-219215885	0	-	219209771	219209771	8553170	12	275,69,95,113,175,105,58,86,64,77,126,1765,	0,458,609,939,1162,2615,3236,3469,3667,3818,4054,4349,
#Deleted in new
chr2	219209775	219211038	chr2:219209775-219211038	0	-	219210832	219211038	789624	5	271,69,95,139,105,	0,454,605,935,1158,
#Partially deleted in new
chr2	219210710	219213420	chr2:219210710-219213420	0	-	219210710	219210710	8553170	4	113,175,105,413,	0,223,1676,2297,
#Partially deleted in new
chr2	219213239	219218476	chr2:219213239-219218476	0	-	219214492	219218476	789624	7	87,64,77,126,66,110,352,	0,199,350,586,881,1149,4885,
#Deleted in new
chr2	219213601	219214683	chr2:219213601-219214683	0	-	219213601	219213601	8553170	4	65,126,66,295,	0,224,519,787,
#Deleted in new
chr2	219213897	219215437	chr2:219213897-219215437	0	-	219213897	219213897	8553170	4	54,66,110,477,	0,223,491,1063,
#Partially deleted in new
chr2	219214140	219216288	chr2:219214140-219216288	0	-	219214140	219214140	8553170	4	46,110,122,292,	0,248,820,1856,
#Partially deleted in new
chr2	219214167	219218426	chr2:219214167-219218426	0	-	219216462	219218426	789624	6	19,110,122,102,138,302,	0,221,793,2196,3502,3957,
#Partially deleted in new
chr2	219215028	219218190	chr2:219215028-219218190	0	-	219216462	219218190	789624	5	54,184,102,138,66,	0,968,1335,2641,3096,
#Partially deleted in new
chr2	219219379	219229717	chr2:219219379-219229717	3	-	219220446	219228024	789624	15	1073,146,223,118,179,249,180,154,749,142,162,65,44,132,183,	0,1367,1700,2670,2892,3265,4205,4489,4726,5691,6031,7489,8390,8542,10155,
#Partially deleted in new
chr2	219219379	219229626	chr2:219219379-219229626	0	-	219222846	219228024	789624	16	1073,146,223,118,179,249,180,95,749,142,162,65,44,132,52,92,	0,1367,1700,2670,2892,3265,4205,4548,4726,5691,6031,7489,8390,8542,9054,10155,
#Partially deleted in new
chr2	219219381	219229368	chr2:219219381-219229368	1	-	219220446	219228024	789624	16	1071,146,223,118,179,249,180,154,749,142,162,65,44,132,52,359,	0,1365,1698,2668,2890,3263,4203,4487,4724,5689,6029,7487,8388,8540,9052,9628,
#Partially deleted in new
chr2	219220053	219229670	chr2:219220053-219229670	1	-	219220446	219228024	789624	16	399,146,223,118,179,249,180,154,749,142,162,65,44,132,52,136,	0,693,1026,1996,2218,2591,3531,3815,4052,5017,5357,6815,7716,7868,8380,9481,
#Deleted in new
chr2	219220208	219222248	chr2:219220208-219222248	0	-	219220208	219220208	8553170	4	244,146,223,199,	0,538,871,1841,
#Partially deleted in new
chr2	219220446	219229629	chr2:219220446-219229629	1	-	219220446	219226897	789624	14	6,146,223,118,179,249,180,154,749,142,162,65,44,95,	0,300,633,1603,1825,2198,3138,3422,3659,4624,4964,6422,7323,9088,
#Partially deleted in new
chr2	219221273	219223964	chr2:219221273-219223964	0	-	219221273	219223964	789624	5	29,179,249,180,96,	0,998,1371,2311,2595,
#Partially deleted in new
chr2	219224682	219229639	chr2:219224682-219229639	0	-	219224682	219225496	789624	4	172,142,162,105,	0,388,728,4852,
#Partially deleted in new
chr2	219224807	219229618	chr2:219224807-219229618	0	-	219224807	219228024	789624	9	47,142,162,65,44,132,52,165,84,	0,263,603,2061,2962,3114,3626,4202,4727,
#Partially deleted in new
chr2	219225070	219229639	chr2:219225070-219229639	0	-	219225070	219228024	789624	7	142,162,65,44,132,49,105,	0,340,1798,2699,2851,3363,4464,
#Partially deleted in new
chr2	219225077	219229618	chr2:219225077-219229618	0	-	219225077	219228024	789624	7	135,162,65,44,158,52,84,	0,333,1791,2692,2844,3356,4457,
#Partially deleted in new
chr2	219225145	219229636	chr2:219225145-219229636	0	-	219225489	219228024	789624	6	67,162,67,44,132,102,	0,265,1723,2624,2776,4389,
#Partially deleted in new
chr2	219225152	219229342	chr2:219225152-219229342	0	-	219225152	219228024	789624	6	60,162,65,44,132,333,	0,258,1716,2617,2769,3857,
#Partially deleted in new
chr2	219225193	219229639	chr2:219225193-219229639	0	-	219225193	219228024	789624	7	19,162,65,44,132,62,105,	0,217,1675,2576,2728,3230,4341,
#Partially deleted in new
chr2	219225195	219229639	chr2:219225195-219229639	0	-	219225489	219228024	789624	7	17,162,67,44,132,49,105,	0,215,1673,2574,2726,3238,4339,
#Partially deleted in new
chr2	219225331	219229594	chr2:219225331-219229594	0	-	219225331	219225331	8553170	6	241,65,44,132,52,60,	0,1537,2438,2590,3102,4203,
#Partially deleted in new
chr2	219225414	219229639	chr2:219225414-219229639	0	-	219225414	219225414	8553170	6	158,67,44,132,52,105,	0,1454,2355,2507,3019,4120,
#Partially deleted in new
chr2	219225414	219229606	chr2:219225414-219229606	0	-	219225414	219225414	8553170	4	158,65,284,72,	0,1454,2355,4120,
#Partially deleted in new
chr2	219225493	219229325	chr2:219225493-219229325	0	-	219225493	219228024	789624	6	79,65,44,132,49,316,	0,1375,2276,2428,2940,3516,
#Partially deleted in new
chr2	219225505	219228693	chr2:219225505-219228693	0	-	219225505	219228024	789624	5	67,65,44,132,260,	0,1363,2264,2416,2928,
#Partially deleted in new
chr2	219226873	219229340	chr2:219226873-219229340	0	-	219226873	219226873	8553170	4	60,44,52,331,	0,896,1560,2136,
#Partially deleted in new
chr2	219229756	219236669	chr2:219229756-219236669	3	+	219230257	219236445	789624	14	144,178,113,103,194,113,148,229,156,487,112,168,86,348,	0,471,2171,2503,2733,3322,3529,3958,4376,5069,5717,5951,6253,6565,
#Partially deleted in new
chr2	219229782	219232666	chr2:219229782-219232666	0	+	219231974	219232666	789624	4	118,113,103,177,	0,2145,2477,2707,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	219229782	219230756	chr2:219229782-219230756	0	+	219229782	219229782	8553170	2	118,529,	0,445,
#Partially deleted in new
chr2	219229786	219236669	chr2:219229786-219236669	1	+	219233150	219236445	789624	11	114,194,113,148,229,156,487,112,168,86,348,	0,2703,3292,3499,3928,4346,5039,5687,5921,6223,6535,
#Partially deleted in new
chr2	219229805	219234693	chr2:219229805-219234693	0	+	219229805	219229805	8553170	8	95,123,103,194,113,148,229,561,	0,422,2454,2684,3273,3480,3909,4327,
#Partially deleted in new
chr2	219229805	219234349	chr2:219229805-219234349	0	+	219229805	219229805	8553170	5	95,194,355,229,217,	0,2684,3273,3909,4327,
#Partially deleted in new
chr2	219229805	219233463	chr2:219229805-219233463	0	+	219229805	219229805	8553170	5	95,123,103,194,385,	0,422,2454,2684,3273,
#Partially deleted in new
chr2	219229805	219232970	chr2:219229805-219232970	0	+	219229805	219229805	8553170	2	95,481,	0,2684,
#Partially deleted in new
chr2	219229826	219236618	chr2:219229826-219236618	0	+	219229826	219229826	8553170	13	74,123,113,103,194,113,148,229,1180,112,168,86,297,	0,401,2101,2433,2663,3252,3459,3888,4306,5647,5881,6183,6495,
#Partially deleted in new
chr2	219229834	219234672	chr2:219229834-219234672	0	+	219229834	219229834	8553170	6	66,194,113,148,229,540,	0,2655,3244,3451,3880,4298,
#Partially deleted in new
chr2	219229837	219233116	chr2:219229837-219233116	0	+	219230257	219232273	789624	5	63,178,103,194,38,	0,390,2422,2652,3241,
#Partially deleted in new
chr2	219229837	219236651	chr2:219229837-219236651	0	+	219229837	219229837	8553170	11	63,123,113,103,194,113,148,229,1743,86,330,	0,390,2090,2422,2652,3241,3448,3877,4295,6172,6484,
#Partially deleted in new
chr2	219229846	219233034	chr2:219229846-219233034	0	+	219229846	219229846	8553170	5	54,178,113,103,545,	0,381,2081,2413,2643,
#Partially deleted in new
chr2	219229884	219232013	chr2:219229884-219232013	0	+	219230257	219232013	789624	2	466,86,	0,2043,
#Partially deleted in new
chr2	219229887	219236649	chr2:219229887-219236649	1	+	219230257	219236445	789624	14	71,178,113,103,194,113,148,229,156,487,112,168,86,328,	0,340,2040,2372,2602,3191,3398,3827,4245,4938,5586,5820,6122,6434,
#Partially deleted in new
chr2	219229895	219232547	chr2:219229895-219232547	0	+	219230257	219232547	789624	5	85,178,113,103,58,	0,332,2032,2364,2594,
#Partially deleted in new
chr2	219229958	219232270	chr2:219229958-219232270	0	+	219230257	219232270	789624	3	447,113,11,	0,1969,2301,
#Partially deleted in new
chr2	219230235	219232781	chr2:219230235-219232781	0	+	219230235	219230235	8553170	4	115,113,103,292,	0,1692,2024,2254,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	219230624	219234722	chr2:219230624-219234722	0	+	219230624	219230624	8553170	7	1416,103,194,113,148,229,590,	0,1635,1865,2454,2661,3090,3508,
#Deleted in new
chr2	219231843	219232759	chr2:219231843-219232759	0	+	219231843	219231843	8553170	3	197,103,270,	0,416,646,
#Deleted in new
chr2	219232181	219232879	chr2:219232181-219232879	0	+	219232181	219232181	8553170	2	181,390,	0,308,
#Deleted in new
chr2	219232312	219233444	chr2:219232312-219233444	0	+	219232312	219232312	8553170	4	50,194,113,159,	0,177,766,973,
#Deleted in new
chr2	219232897	219233766	chr2:219232897-219233766	0	+	219232897	219232897	8553170	2	536,52,	0,817,
#Deleted in new
chr2	219233666	219234416	chr2:219233666-219234416	0	+	219233666	219233666	8553170	2	277,284,	0,466,
#Deleted in new
chr2	219235150	219235801	chr2:219235150-219235801	0	+	219235150	219235150	8553170	2	435,94,	0,557,
#Deleted in new
chr2	219235644	219236651	chr2:219235644-219236651	0	+	219235644	219235644	8553170	2	231,642,	0,365,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	219236605	219245472	chr2:219236605-219245472	3	-	219237071	219243573	789624	17	742,216,132,114,90,75,119,41,122,59,175,95,61,151,167,142,244,	0,906,1220,1644,1889,2099,2486,2805,2955,3169,3314,3585,5908,6162,6542,6896,8623,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	219236760	219240234	chr2:219236760-219240234	0	-	219236760	219236760	8553170	11	587,216,132,114,90,75,119,41,122,59,44,	0,751,1065,1489,1734,1944,2331,2650,2800,3014,3430,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	219236765	219243614	chr2:219236765-219243614	1	-	219237071	219243573	789624	14	582,216,132,114,90,75,119,41,122,59,61,151,167,113,	0,746,1060,1484,1729,1939,2326,2645,2795,3009,5748,6002,6382,6736,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	219236770	219245478	chr2:219236770-219245478	1	-	219237071	219243573	789624	17	577,216,132,114,90,75,119,41,122,59,175,95,61,151,167,130,250,	0,741,1055,1479,1724,1934,2321,2640,2790,3004,3149,3420,5743,5997,6377,6731,8458,
#Partially deleted in new
chr2	219239421	219243598	chr2:219239421-219243598	0	-	219243181	219243573	789624	7	30,122,59,61,151,115,97,	0,139,353,3092,3346,3726,4080,
#Partially deleted in new
chr2	219239882	219243184	chr2:219239882-219243184	0	-	219239882	219243184	789624	5	212,95,61,151,37,	0,308,2631,2885,3265,
#Partially deleted in new
chr2	219240048	219243106	chr2:219240048-219243106	0	-	219240048	219240048	8553170	4	46,95,61,339,	0,142,2465,2719,
#Partially deleted in new
chr2	219240153	219243372	chr2:219240153-219243372	0	-	219240153	219240153	8553170	4	132,61,151,225,	0,2360,2614,2994,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	219242813	219245406	chr2:219242813-219245406	0	-	219242813	219243573	789624	4	105,167,438,178,	0,334,688,2415,
#Deleted in new
chr2	219242842	219243598	chr2:219242842-219243598	0	-	219242842	219242842	8553170	2	472,97,	0,659,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	219243307	219245444	chr2:219243307-219245444	0	-	219243307	219243573	789624	4	7,130,164,216,	0,194,471,1921,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	219243546	219245441	chr2:219243546-219245441	0	-	219243546	219243573	789624	2	396,213,	0,1682,
#Partially deleted in new
chr2	219245454	219250337	chr2:219245454-219250337	3	+	219245999	219248559	0	8	68,190,220,134,121,96,122,1917,	0,441,1202,1658,1960,2207,2738,2966,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	219245472	219246424	chr2:219245472-219246424	0	+	219245472	219245472	8553170	2	50,529,	0,423,
#Partially deleted in new
chr2	219245478	219248892	chr2:219245478-219248892	1	+	219245999	219248559	0	8	318,190,220,134,121,96,122,472,	0,417,1178,1634,1936,2183,2714,2942,
#Partially deleted in new
chr2	219245478	219246967	chr2:219245478-219246967	0	+	219245478	219245478	8553170	3	44,190,311,	0,417,1178,
#Partially deleted in new
chr2	219245478	219248191	chr2:219245478-219248191	0	+	219245478	219245478	8553170	6	318,190,220,134,121,530,	0,417,1178,1634,1936,2183,
#Partially deleted in new
chr2	219245482	219248746	chr2:219245482-219248746	1	+	219245999	219248559	789624	6	40,190,121,96,122,326,	0,413,1932,2179,2710,2938,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	219245506	219248904	chr2:219245506-219248904	0	+	219245506	219245506	8553170	6	290,981,121,96,122,484,	0,389,1908,2155,2686,2914,
#Partially deleted in new
chr2	219245509	219247826	chr2:219245509-219247826	0	+	219245509	219245509	8553170	5	287,190,220,134,412,	0,386,1147,1603,1905,
#Partially deleted in new
chr2	219245557	219247631	chr2:219245557-219247631	0	+	219245557	219245557	8553170	4	239,190,220,217,	0,338,1099,1857,
#Partially deleted in new
chr2	219245891	219248891	chr2:219245891-219248891	1	+	219245999	219248559	789624	7	194,355,134,121,96,122,471,	0,630,1221,1523,1770,2301,2529,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	219245894	219248895	chr2:219245894-219248895	0	+	219245894	219245894	8553170	6	982,134,121,96,122,475,	0,1218,1520,1767,2298,2526,
#Partially deleted in new
chr2	219245895	219248702	chr2:219245895-219248702	1	+	219245999	219248559	789624	6	190,220,134,121,122,282,	0,761,1217,1519,2297,2525,
#Partially deleted in new
chr2	219245895	219247534	chr2:219245895-219247534	0	+	219245895	219245895	8553170	3	190,134,120,	0,1217,1519,
#Deleted in new
chr2	219249710	219254032	chr2:219249710-219254032	3	-	219250351	219253858	789624	4	1613,149,223,177,	0,1854,2297,4145,
#Deleted in new
chr2	219249710	219254608	chr2:219249710-219254608	1	-	219250351	219252188	789624	4	1613,149,223,514,	0,1854,2297,4384,
#Deleted in new
chr2	219250728	219253901	chr2:219250728-219253901	0	-	219250728	219250728	8553170	3	595,149,46,	0,836,3127,
#Partially deleted in new
chr2	219250771	219277876	chr2:219250771-219277876	0	-	219250771	219251239	789624	2	552,63,	0,27042,
#Partially deleted in new
chr2	219251112	219278170	chr2:219251112-219278170	0	-	219251112	219252188	789624	4	211,149,223,357,	0,452,895,26701,
#Deleted in new
chr2	219251172	219253145	chr2:219251172-219253145	0	-	219251172	219253067	789624	4	151,149,223,150,	0,392,835,1823,
#Deleted in new
chr2	219251193	219253354	chr2:219251193-219253354	0	-	219251193	219252188	789624	4	130,149,223,146,	0,371,814,2015,
#Deleted in new
chr2	219251193	219253916	chr2:219251193-219253916	0	-	219251193	219251193	8553170	3	520,223,61,	0,814,2662,
#Deleted in new
chr2	219251538	219253916	chr2:219251538-219253916	0	-	219251538	219251538	8553170	2	692,61,	0,2317,
#Deleted in new
chr2	219251586	219252993	chr2:219251586-219252993	0	-	219251586	219252787	789624	3	127,223,215,	0,421,1192,
#Partially deleted in new
chr2	219253242	219272011	chr2:219253242-219272011	0	+	219253242	219253242	8553170	4	177,344,102,503,	0,12980,16991,18266,
#Partially deleted in new
chr2	219253242	219272011	chr2:219253242-219272011	0	+	219253242	219253242	8553170	4	177,344,107,503,	0,12980,16986,18266,
#Partially deleted in new
chr2	219253242	219272188	chr2:219253242-219272188	3	+	219253407	219271699	789624	4	177,46,134,1023,	0,13278,16959,17923,
#Partially deleted in new
chr2	219279266	219286900	chr2:219279266-219286900	3	+	219279833	219284987	0	9	252,101,110,54,123,93,103,71,2269,	0,531,1311,2451,2672,3570,3866,4152,5365,
#Partially deleted in new
chr2	219279341	219284696	chr2:219279341-219284696	0	+	219279833	219284696	789624	9	108,101,110,54,123,93,103,71,65,	0,456,1236,2376,2597,3495,3791,4077,5290,
#Partially deleted in new
chr2	219279343	219286898	chr2:219279343-219286898	1	+	219279833	219285997	0	10	175,101,110,54,123,93,103,71,204,912,	0,454,1234,2374,2595,3493,3789,4075,5288,6643,
#Partially deleted in new
chr2	219279365	219282105	chr2:219279365-219282105	0	+	219279833	219282105	789624	5	153,101,110,54,167,	0,432,1212,2352,2573,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	219279366	219286895	chr2:219279366-219286895	0	+	219279366	219279366	8553170	6	152,101,1194,123,653,2264,	0,431,1211,2572,3470,5265,
#Partially deleted in new
chr2	219279366	219282660	chr2:219279366-219282660	0	+	219279366	219279366	8553170	5	152,101,110,54,722,	0,431,1211,2351,2572,
#Deleted in new
chr2	219279368	219280170	chr2:219279368-219280170	0	+	219279368	219279368	8553170	2	150,373,	0,429,
#Partially deleted in new
chr2	219279464	219284838	chr2:219279464-219284838	0	+	219279833	219284838	789624	8	54,101,110,54,123,103,71,207,	0,333,1113,2253,2474,3668,3954,5167,
#Partially deleted in new
chr2	219279515	219282852	chr2:219279515-219282852	0	+	219279833	219282852	789624	5	383,110,54,123,16,	0,1062,2202,2423,3321,
#Partially deleted in new
chr2	219279516	219282929	chr2:219279516-219282929	0	+	219279833	219282929	789624	6	171,101,110,54,123,93,	0,281,1061,2201,2422,3320,
#Deleted in new
chr2	219279587	219280693	chr2:219279587-219280693	0	+	219279587	219279587	8553170	2	311,116,	0,990,
#Deleted in new
chr2	219279905	219281373	chr2:219279905-219281373	0	+	219279905	219279905	8553170	2	154,796,	0,672,
#Partially deleted in new
chr2	219279919	219284828	chr2:219279919-219284828	0	+	219279919	219279919	8553170	8	56,110,54,123,93,103,71,197,	0,658,1798,2019,2917,3213,3499,4712,
#Partially deleted in new
chr2	219280612	219282665	chr2:219280612-219282665	0	+	219280612	219280612	8553170	4	75,54,123,187,	0,1105,1326,1866,
#Partially deleted in new
chr2	219282697	219285196	chr2:219282697-219285196	0	+	219282697	219282697	8553170	4	232,103,71,565,	0,435,721,1934,
#Partially deleted in new
chr2	219282741	219286839	chr2:219282741-219286839	0	+	219282741	219282741	8553170	5	188,103,71,204,853,	0,391,677,1890,3245,
#Partially deleted in new
chr2	219283063	219284874	chr2:219283063-219284874	0	+	219283063	219283063	8553170	3	172,71,243,	0,355,1568,
#Deleted in new
chr2	219285262	219286200	chr2:219285262-219286200	0	+	219285262	219285262	8553170	2	514,214,	0,724,
#Partially deleted in new
chr2	219289622	219309573	chr2:219289622-219309573	3	-	219290225	219309332	0	23	675,74,65,54,167,120,78,74,148,201,219,65,80,87,275,35,132,355,262,97,114,51,356,	0,915,1203,1847,5352,6603,6816,7126,7362,7610,8262,9424,9682,10077,10362,11320,11965,12514,12953,14112,17821,18169,19595,
#Partially deleted in new
chr2	219289622	219309498	chr2:219289622-219309498	1	-	219290225	219309332	0	22	675,74,65,54,167,120,78,74,148,201,219,65,80,275,35,132,355,262,97,114,51,281,	0,915,1203,1847,5352,6603,6816,7126,7362,7610,8262,9424,9682,10362,11320,11965,12514,12953,14112,17821,18169,19595,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	219289624	219292896	chr2:219289624-219292896	0	-	219289624	219289624	8553170	4	673,74,65,1427,	0,913,1201,1845,
#Partially deleted in new
chr2	219289624	219308197	chr2:219289624-219308197	0	-	219289624	219289624	8553170	20	673,74,65,54,1371,78,74,148,201,219,65,80,87,275,35,132,355,262,97,754,	0,913,1201,1845,5350,6814,7124,7360,7608,8260,9422,9680,10075,10360,11318,11963,12512,12951,14110,17819,
#Partially deleted in new
chr2	219289648	219296341	chr2:219289648-219296341	0	-	219290286	219296341	789624	5	649,65,54,167,116,	0,1177,1821,5326,6577,
#Partially deleted in new
chr2	219289840	219308984	chr2:219289840-219308984	1	-	219290225	219307453	0	23	457,74,65,54,167,120,78,74,148,201,219,65,80,87,275,35,132,355,262,97,114,51,103,	0,697,985,1629,5134,6385,6598,6908,7144,7392,8044,9206,9464,9859,10144,11102,11747,12296,12735,13894,17603,17951,19041,
#Partially deleted in new
chr2	219290051	219296758	chr2:219290051-219296758	0	-	219290051	219290051	8553170	8	246,74,65,54,54,120,78,10,	0,486,774,1418,4923,6174,6387,6697,
#Deleted in new
chr2	219294110	219294200	chr2:219294110-219294200	3	-	219294110	219294110	5263520	1	90,	0,
#Partially deleted in new
chr2	219297422	219299572	chr2:219297422-219299572	0	-	219297422	219297422	8553170	4	11,219,65,268,	0,462,1624,1882,
#Partially deleted in new
chr2	219297978	219299492	chr2:219297978-219299492	0	-	219297978	219297978	8553170	2	125,446,	0,1068,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	219299001	219304130	chr2:219299001-219304130	3	+	219299001	219299001	8553170	3	127,50,134,	0,1373,4995,
#Partially deleted in new
chr2	219302484	219309009	chr2:219302484-219309009	0	-	219302484	219307453	789624	6	7,262,97,114,51,32,	0,91,1250,4959,5307,6493,
#Partially deleted in new
chr2	219302486	219309648	chr2:219302486-219309648	0	-	219302486	219307453	789624	6	5,262,97,114,51,77,	0,89,1248,4957,5305,7085,
#Partially deleted in new
chr2	219302617	219309173	chr2:219302617-219309173	0	-	219302617	219309092	789624	5	220,97,114,51,97,	0,1117,4826,5174,6459,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	219302662	219304141	chr2:219302662-219304141	0	-	219302662	219302662	8553170	2	175,407,	0,1072,
#Partially deleted in new
chr2	219302684	219309007	chr2:219302684-219309007	0	-	219302684	219307453	789624	5	153,97,114,51,126,	0,1050,4759,5107,6197,
#Partially deleted in new
chr2	219302743	219309538	chr2:219302743-219309538	0	-	219302743	219307453	789624	5	94,97,114,51,110,	0,991,4700,5048,6685,
#Partially deleted in new
chr2	219302767	219309381	chr2:219302767-219309381	0	-	219308933	219309332	789624	6	70,97,114,51,96,164,	0,967,4676,5024,6114,6450,
#Partially deleted in new
chr2	219307017	219308923	chr2:219307017-219308923	0	-	219307017	219307017	8553170	4	297,114,51,42,	0,426,774,1864,
#Partially deleted in new
chr2	219307482	219309402	chr2:219307482-219309402	0	-	219307482	219307482	8553170	2	360,185,	0,1735,
#Partially deleted in new
chr2	219307527	219308340	chr2:219307527-219308340	0	-	219307527	219307527	8553170	2	30,549,	0,264,
#Partially deleted in new
chr2	219327408	219333177	chr2:219327408-219333177	3	-	219327516	219333177	789624	7	155,85,90,128,105,215,17,	0,1515,1754,2228,3362,5115,5752,
#Partially deleted in new
chr2	219327408	219332629	chr2:219327408-219332629	1	-	219327512	219329729	789624	6	155,90,42,128,105,106,	0,1754,1954,2228,3362,5115,
#Partially deleted in new
chr2	219327408	219331178	chr2:219327408-219331178	0	-	219327408	219327408	8553170	5	155,85,90,128,408,	0,1515,1754,2228,3362,
#Deleted in new
chr2	219358869	219358983	chr2:219358869-219358983	7	-	219358869	219358869	16724991	1	114,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	219373526	219387796	chr2:219373526-219387796	3	-	219374291	219387157	789624	15	816,168,102,40,161,84,78,108,76,131,126,114,89,94,221,	0,1328,7808,8018,8452,9604,10839,11897,12104,12441,12759,13138,13365,13543,14049,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	219373545	219388015	chr2:219373545-219388015	1	-	219374291	219387794	789624	15	797,168,102,40,161,84,78,108,76,131,126,114,89,94,257,	0,1309,7789,7999,8433,9585,10820,11878,12085,12422,12740,13119,13346,13524,14213,
#Partially deleted in new
chr2	219374193	219388876	chr2:219374193-219388876	1	-	219374291	219386772	789624	16	149,168,102,40,161,84,78,108,76,131,126,114,57,94,47,43,	0,661,7141,7351,7785,8937,10172,11230,11437,11774,12092,12471,12698,12876,14508,14640,
#Partially deleted in new
chr2	219374193	219400007	chr2:219374193-219400007	1	-	219374291	219399925	789624	15	149,168,102,40,161,84,78,108,76,131,126,114,89,94,142,	0,661,7141,7351,7785,8937,10172,11230,11437,11774,12092,12471,12698,12876,25672,
#Partially deleted in new
chr2	219374195	219387929	chr2:219374195-219387929	0	-	219386934	219387794	789624	15	147,168,102,40,161,84,78,108,76,131,126,114,57,94,171,	0,659,7139,7349,7783,8935,10170,11228,11435,11772,12090,12469,12696,12874,13563,
#Partially deleted in new
chr2	219374195	219387932	chr2:219374195-219387932	0	-	219387683	219387794	789624	15	147,168,102,40,161,84,78,108,76,131,126,114,89,94,357,	0,659,7139,7349,7783,8935,10170,11228,11435,11772,12090,12469,12696,12874,13380,
#Partially deleted in new
chr2	219374196	219381890	chr2:219374196-219381890	0	-	219374196	219374196	8553170	5	146,168,102,40,99,	0,658,7138,7348,7595,
#Partially deleted in new
chr2	219374879	219381779	chr2:219374879-219381779	0	-	219374879	219374879	8553170	3	143,102,235,	0,6455,6665,
#Partially deleted in new
chr2	219374923	219381486	chr2:219374923-219381486	0	-	219374923	219374923	8553170	2	99,152,	0,6411,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	219381802	219384573	chr2:219381802-219384573	0	-	219381802	219381802	8553170	3	337,84,208,	0,1328,2563,
#Partially deleted in new
chr2	219381997	219400022	chr2:219381997-219400022	0	-	219381997	219399925	789624	10	142,84,78,76,131,126,114,89,94,157,	0,1133,2368,3633,3970,4288,4667,4894,5072,17868,
#Partially deleted in new
chr2	219383204	219387347	chr2:219383204-219387347	0	-	219383204	219387157	789624	10	10,78,108,76,131,126,114,89,94,70,	0,1161,2219,2426,2763,3081,3460,3687,3865,4073,
#Partially deleted in new
chr2	219383208	219387834	chr2:219383208-219387834	0	-	219383208	219387794	789624	8	6,78,131,126,114,89,94,76,	0,1157,2759,3077,3456,3683,3861,4550,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	219384585	219387792	chr2:219384585-219387792	0	-	219384585	219384585	8553170	8	946,76,131,126,114,89,94,34,	0,1045,1382,1700,2079,2306,2484,3173,
#Deleted in new
chr2	219385153	219385834	chr2:219385153-219385834	0	-	219385153	219385153	8553170	2	378,204,	0,477,
#Deleted in new
chr2	219385430	219387907	chr2:219385430-219387907	0	-	219385430	219387794	789624	8	101,121,131,126,114,89,94,149,	0,200,537,855,1234,1461,1639,2328,
#Partially deleted in new
chr2	219385658	219400007	chr2:219385658-219400007	0	-	219385658	219386772	789624	7	48,131,126,114,57,94,68,	0,309,627,1006,1233,1411,14281,
#Deleted in new
chr2	219385981	219387346	chr2:219385981-219387346	0	-	219385981	219386772	789624	6	117,126,114,57,94,69,	0,304,683,910,1088,1296,
#Deleted in new
chr2	219386203	219387818	chr2:219386203-219387818	0	-	219386203	219386203	8553170	5	208,114,89,94,60,	0,461,688,866,1555,
#Partially deleted in new
chr2	219386681	219400006	chr2:219386681-219400006	0	-	219387146	219399925	789624	5	97,89,94,61,141,	0,210,388,12758,13184,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	219386686	219399981	chr2:219386686-219399981	0	-	219386686	219387157	789624	6	92,89,94,47,138,116,	0,205,383,2015,6924,13179,
#Partially deleted in new
chr2	219388495	219403633	chr2:219388495-219403633	3	+	219388495	219388495	8553170	2	553,1045,	0,14093,
#Partially deleted in new
chr2	219418376	219426739	chr2:219418376-219426739	3	+	219418462	219425990	789624	9	664,61,96,162,126,221,44,83,791,	0,1718,1874,2118,2451,2963,5400,7286,7572,
#Partially deleted in new
chr2	219420044	219423820	chr2:219420044-219423820	0	+	219420044	219420044	8553170	6	111,96,162,126,221,44,	0,206,450,783,1295,3732,
#Partially deleted in new
chr2	219420121	219423843	chr2:219420121-219423843	0	+	219420121	219420121	8553170	6	34,96,162,126,221,67,	0,129,373,706,1218,3655,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	219425070	219426184	chr2:219425070-219426184	3	-	219425070	219425070	8553170	2	120,104,	0,1010,
#Deleted in new
chr2	219425519	219426184	chr2:219425519-219426184	0	+	219425519	219425519	8553170	2	226,236,	0,429,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	219427476	219429319	chr2:219427476-219429319	3	+	219427476	219427476	8553170	1	1843,	0,
#Partially deleted in new
chr2	219434845	219493632	chr2:219434845-219493632	3	+	219434977	219492786	0	41	520,90,337,1298,144,183,176,89,176,261,159,190,224,120,105,207,124,176,113,169,97,201,58,78,179,27,153,43,69,1975,132,117,168,123,168,604,240,224,76,150,1039,	0,9807,9979,13128,16290,16779,27036,27452,29587,32328,33732,34013,34310,37022,37381,38044,38658,38882,42024,42431,42843,43059,44298,44937,45116,45825,46458,46792,47938,48252,50500,53348,53652,53932,54208,54490,55563,55887,56948,57265,57748,
#Partially deleted in new
chr2	219437274	219466861	chr2:219437274-219466861	0	+	219437274	219437274	8553170	11	46,530,90,337,1298,144,183,176,89,176,805,	0,5833,7378,7550,10699,13861,14350,24607,25023,27158,28782,
#Partially deleted in new
chr2	219441515	219448171	chr2:219441515-219448171	0	+	219441557	219448171	789624	6	79,43,35,90,160,198,	0,1592,2509,3137,3309,6458,
#Deleted in new
chr2	219442015	219444844	chr2:219442015-219444844	0	+	219442050	219443236	789624	5	68,333,35,90,20,	0,1092,2009,2637,2809,
#Partially deleted in new
chr2	219442022	219448515	chr2:219442022-219448515	0	+	219442050	219448515	789624	6	61,43,30,90,160,542,	0,1085,2007,2630,2802,5951,
#Partially deleted in new
chr2	219442044	219466860	chr2:219442044-219466860	1	+	219442050	219466064	789624	11	39,43,90,337,1298,144,183,176,89,176,804,	0,1063,2608,2780,5929,9091,9580,19837,20253,22388,24012,
#Partially deleted in new
chr2	219442046	219448191	chr2:219442046-219448191	0	+	219442050	219444878	789624	6	37,43,35,90,160,218,	0,1061,1978,2606,2778,5927,
#Deleted in new
chr2	219442048	219444915	chr2:219442048-219444915	0	+	219442050	219443236	789624	5	35,333,30,90,91,	0,1059,1981,2604,2776,
#Partially deleted in new
chr2	219443673	219466861	chr2:219443673-219466861	0	+	219443673	219443673	8553170	9	386,90,337,1298,144,183,176,89,2429,	0,979,1151,4300,7462,7951,18208,18624,20759,
#Partially deleted in new
chr2	219444656	219448158	chr2:219444656-219448158	0	+	219444656	219448158	789624	3	86,280,185,	0,225,3317,
#Partially deleted in new
chr2	219445044	219451783	chr2:219445044-219451783	0	+	219445044	219451148	789624	3	117,144,159,	0,6091,6580,
#Partially deleted in new
chr2	219445550	219448395	chr2:219445550-219448395	0	+	219445550	219445550	8553170	2	132,422,	0,2423,
#Partially deleted in new
chr2	219445579	219448455	chr2:219445579-219448455	0	+	219445579	219445579	8553170	2	108,482,	0,2394,
#Partially deleted in new
chr2	219445626	219493593	chr2:219445626-219493593	0	+	219445626	219445626	8553170	39	61,1295,144,183,176,89,176,261,159,190,224,120,105,207,124,176,113,169,97,201,58,78,179,27,153,43,69,1975,132,117,168,123,168,604,240,224,76,150,1000,	0,2350,5509,5998,16255,16671,18806,21547,22951,23232,23529,26241,26600,27263,27877,28101,31243,31650,32062,32278,33517,34156,34335,35044,35677,36011,37157,37471,39719,42567,42871,43151,43427,43709,44782,45106,46167,46484,46967,
#Partially deleted in new
chr2	219450669	219466861	chr2:219450669-219466861	0	+	219450669	219450669	8553170	5	610,183,176,89,2429,	0,955,11212,11628,13763,
#Partially deleted in new
chr2	219451740	219464667	chr2:219451740-219464667	0	+	219451740	219451740	8553170	4	67,176,89,235,	0,10141,10557,12692,
#Partially deleted in new
chr2	219460765	219466841	chr2:219460765-219466841	1	+	219461988	219466064	0	5	231,176,89,176,785,	0,1116,1532,3667,5291,
#Partially deleted in new
chr2	219461221	219464654	chr2:219461221-219464654	0	+	219461221	219461221	8553170	4	79,176,89,222,	0,660,1076,3211,
#Partially deleted in new
chr2	219461239	219466861	chr2:219461239-219466861	0	+	219461239	219461239	8553170	4	818,89,176,805,	0,1058,3193,4817,
#Partially deleted in new
chr2	219461254	219466655	chr2:219461254-219466655	1	+	219461988	219466064	0	5	46,176,89,176,599,	0,627,1043,3178,4802,
#Partially deleted in new
chr2	219461384	219466862	chr2:219461384-219466862	1	+	219461988	219466064	0	5	27,176,89,176,806,	0,497,913,3048,4672,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	219471661	219474378	chr2:219471661-219474378	0	+	219471661	219471661	8553170	2	670,1489,	0,1228,
#Partially deleted in new
chr2	219482072	219516877	chr2:219482072-219516877	3	-	219482072	219482072	8553170	2	337,182,	0,34623,
#Partially deleted in new
chr2	219491866	219498244	chr2:219491866-219498244	0	+	219491866	219498189	789624	7	3,150,160,128,308,142,194,	0,244,727,4488,4942,5853,6184,
#Deleted in new
chr2	219496354	219498287	chr2:219496354-219498287	1	+	219496354	219498189	789624	4	128,308,142,237,	0,454,1365,1696,
#Deleted in new
chr2	219497610	219498246	chr2:219497610-219498246	3	-	219497610	219497610	8553170	1	636,	0,
#Deleted in new
chr2	219497690	219498287	chr2:219497690-219498287	0	+	219497690	219497690	8553170	2	171,237,	0,360,
#Partially deleted in new
chr2	219498866	219506987	chr2:219498866-219506987	3	+	219499975	219506798	789624	13	72,60,98,104,187,60,131,135,98,47,93,169,290,	0,1089,1254,2609,2984,3515,5216,6361,6591,6848,7113,7387,7831,
#Partially deleted in new
chr2	219498883	219502441	chr2:219498883-219502441	0	+	219498883	219498883	8553170	5	55,60,98,562,60,	0,1072,1237,2592,3498,
#Partially deleted in new
chr2	219498887	219506935	chr2:219498887-219506935	1	+	219499975	219506798	789624	12	51,60,98,104,187,60,131,135,304,93,169,238,	0,1068,1233,2588,2963,3494,5195,6340,6570,7092,7366,7810,
#Partially deleted in new
chr2	219498900	219506989	chr2:219498900-219506989	1	+	219499975	219506798	789624	13	354,55,98,104,187,60,131,135,98,47,93,169,292,	0,1060,1220,2575,2950,3481,5182,6327,6557,6814,7079,7353,7797,
#Partially deleted in new
chr2	219498900	219504874	chr2:219498900-219504874	0	+	219498900	219498900	8553170	5	38,55,98,298,80,	0,1060,1220,2575,5894,
#Partially deleted in new
chr2	219498904	219506933	chr2:219498904-219506933	0	+	219499975	219505714	789624	13	350,55,98,104,187,60,131,135,98,67,93,169,236,	0,1056,1216,2571,2946,3477,5178,6323,6553,6790,7075,7349,7793,
#Partially deleted in new
chr2	219498905	219506988	chr2:219498905-219506988	1	+	219499975	219506798	789624	13	33,55,98,104,187,60,131,135,98,47,93,169,291,	0,1055,1215,2570,2945,3476,5177,6322,6552,6809,7074,7348,7792,
#Partially deleted in new
chr2	219498906	219504132	chr2:219498906-219504132	0	+	219499975	219504132	789624	7	348,60,98,104,187,60,50,	0,1049,1214,2569,2944,3475,5176,
#Partially deleted in new
chr2	219498908	219505555	chr2:219498908-219505555	0	+	219500185	219505555	789624	8	30,41,104,187,60,131,135,98,	0,1269,2567,2942,3473,5174,6319,6549,
#Partially deleted in new
chr2	219498914	219506987	chr2:219498914-219506987	1	+	219499975	219506798	789624	13	57,55,98,104,187,60,131,135,98,47,93,169,290,	0,1046,1206,2561,2936,3467,5168,6313,6543,6800,7065,7339,7783,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	219499774	219506987	chr2:219499774-219506987	0	+	219499774	219499774	8553170	5	241,1917,60,1990,734,	0,346,2607,4308,6479,
#Partially deleted in new
chr2	219499954	219506988	chr2:219499954-219506988	1	+	219499975	219506736	789624	13	61,98,104,187,60,131,135,98,47,93,69,99,291,	0,166,1521,1896,2427,4128,5273,5503,5760,6025,6299,6369,6743,
#Deleted in new
chr2	219505724	219506694	chr2:219505724-219506694	0	+	219505724	219506466	789624	3	37,93,441,	0,255,529,
#Deleted in new
chr2	219505939	219506422	chr2:219505939-219506422	0	+	219505939	219505939	8553170	2	133,169,	0,314,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	219514169	219534058	chr2:219514169-219534058	0	+	219514169	219514169	8553170	3	1137,145,2058,	0,17588,17831,
#Partially deleted in new
chr2	219514329	219538772	chr2:219514329-219538772	3	+	219514343	219538046	789624	9	977,145,128,163,154,92,80,105,840,	0,17428,17671,17985,20841,22736,22912,23302,23603,
#Partially deleted in new
chr2	219514329	219538772	chr2:219514329-219538772	1	+	219514343	219538046	789624	10	977,145,128,163,57,154,92,80,105,840,	0,17428,17671,17985,18553,20841,22736,22912,23302,23603,
#Partially deleted in new
chr2	219517135	219538772	chr2:219517135-219538772	0	+	219517135	219517135	8553170	8	133,145,128,163,57,154,92,1531,	0,14622,14865,15179,15747,18035,19930,20106,
#Partially deleted in new
chr2	219517240	219533031	chr2:219517240-219533031	0	+	219517240	219517240	8553170	5	28,145,128,163,149,	0,14517,14760,15074,15642,
#Deleted in new
chr2	219538946	219543787	chr2:219538946-219543787	3	-	219539382	219543538	789624	4	1696,180,574,563,	0,1999,2669,4278,
#Deleted in new
chr2	219538947	219543097	chr2:219538947-219543097	1	-	219539382	219542017	789624	4	1695,180,574,185,	0,1998,2668,3965,
#Deleted in new
chr2	219541459	219543573	chr2:219541459-219543573	1	-	219541606	219543538	789624	2	730,349,	0,1765,
#Partially deleted in new
chr2	219543662	219550579	chr2:219543662-219550579	3	+	219544727	219549854	789624	6	349,232,170,576,203,863,	0,483,1061,3843,5489,6054,
#Partially deleted in new
chr2	219544005	219548020	chr2:219544005-219548020	0	+	219544727	219548020	789624	3	372,170,515,	0,718,3500,
#Partially deleted in new
chr2	219544022	219550595	chr2:219544022-219550595	1	+	219544727	219549854	789624	5	355,205,576,203,879,	0,666,3483,5129,5694,
#Partially deleted in new
chr2	219544049	219547549	chr2:219544049-219547549	0	+	219544086	219547549	789624	3	328,133,44,	0,711,3456,
#Deleted in new
chr2	219547210	219547658	chr2:219547210-219547658	3	-	219547210	219547210	8553170	1	448,	0,
#Deleted in new
chr2	219549072	219549147	chr2:219549072-219549147	3	-	219549072	219549072	5263520	1	75,	0,
#Deleted in new
chr2	219550728	219552389	chr2:219550728-219552389	0	-	219550728	219550728	8553170	3	114,270,278,	0,800,1383,
#Partially deleted in new
chr2	219550728	219570739	chr2:219550728-219570739	0	-	219550728	219550728	8553170	16	1070,105,489,273,146,276,288,273,273,273,273,297,303,252,270,519,	0,1383,1807,5291,5849,6614,7094,8496,11673,12626,14513,16101,16544,16989,17326,19492,
#Deleted in new
chr2	219550728	219552714	chr2:219550728-219552714	0	-	219550728	219550728	8553170	4	140,270,105,179,	0,800,1383,1807,
#Partially deleted in new
chr2	219550741	219571289	chr2:219550741-219571289	3	-	219550834	219571232	0	21	101,270,105,162,157,113,267,273,270,276,288,276,273,273,273,273,297,303,252,270,1069,	0,787,1370,1794,2126,2832,3732,5278,5712,6601,7081,7442,8483,11660,12613,14500,16088,16531,16976,17313,19479,
#Partially deleted in new
chr2	219550755	219571241	chr2:219550755-219571241	1	-	219550834	219571232	789624	20	87,270,105,162,157,113,267,273,270,288,276,273,273,273,273,297,303,252,270,1021,	0,773,1356,1780,2112,2818,3718,5264,5698,7067,7428,8469,11646,12599,14486,16074,16517,16962,17299,19465,
#Deleted in new
chr2	219554228	219554772	chr2:219554228-219554772	0	-	219554228	219554228	8553170	1	544,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	219555165	219571289	chr2:219555165-219571289	1	-	219555996	219571232	0	14	1127,270,276,288,276,273,273,273,273,297,303,252,270,1069,	0,1288,2177,2657,3018,4059,7236,8189,10076,11664,12107,12552,12889,15055,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	219555460	219562512	chr2:219555460-219562512	0	-	219555996	219562512	789624	5	832,270,288,273,111,	0,993,2362,3764,6941,
#Partially deleted in new
chr2	219555762	219559431	chr2:219555762-219559431	0	-	219555996	219559431	789624	5	530,270,288,276,207,	0,691,2060,2421,3462,
#Deleted in new
chr2	219556241	219557027	chr2:219556241-219557027	0	-	219556241	219556241	8553170	2	51,574,	0,212,
#Deleted in new
chr2	219559082	219559626	chr2:219559082-219559626	3	+	219559082	219559082	8553170	1	544,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	219561721	219571289	chr2:219561721-219571289	1	-	219561883	219571232	0	9	287,273,273,273,297,303,252,270,1069,	0,680,1633,3520,5108,5551,5996,6333,8499,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	219561746	219571464	chr2:219561746-219571464	1	-	219561883	219568097	789624	9	262,273,273,273,297,303,252,270,71,	0,655,1608,3495,5083,5526,5971,6308,9647,
#Partially deleted in new
chr2	219562814	219565379	chr2:219562814-219565379	0	-	219562814	219562814	8553170	2	813,138,	0,2427,
#Partially deleted in new
chr2	219569161	219575053	chr2:219569161-219575053	0	+	219569161	219569161	8553170	2	285,360,	0,5532,
#Deleted in new
chr2	219570220	219571492	chr2:219570220-219571492	0	-	219570220	219570220	8553170	2	472,99,	0,1173,
#Deleted in new
chr2	219570457	219571859	chr2:219570457-219571859	0	-	219570457	219570457	8553170	2	118,466,	0,936,
#Partially deleted in new
chr2	219572194	219575713	chr2:219572194-219575713	3	+	219572374	219575526	789624	2	448,1020,	0,2499,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	219590686	219590984	chr2:219590686-219590984	3	-	219590686	219590686	8553170	1	298,	0,
#Partially deleted in new
chr2	219597859	219616451	chr2:219597859-219616451	3	+	219598119	219616193	789624	25	64,87,206,75,96,108,72,127,104,96,42,147,85,384,206,117,178,231,104,98,179,82,71,248,408,	0,234,3375,3781,4128,4608,4845,7748,8096,8335,8616,8852,9193,10187,10723,11237,11503,13744,14095,15268,15892,16301,16616,17234,18184,
#Partially deleted in new
chr2	219597870	219601840	chr2:219597870-219601840	0	+	219597870	219597870	8553170	4	53,87,206,200,	0,223,3364,3770,
#Partially deleted in new
chr2	219598093	219602083	chr2:219598093-219602083	0	+	219598119	219601506	789624	4	87,320,75,96,	0,3141,3547,3894,
#Partially deleted in new
chr2	219598138	219609706	chr2:219598138-219609706	0	+	219598138	219598138	8553170	16	42,206,75,96,108,72,127,104,96,42,147,85,384,206,117,344,	0,3096,3502,3849,4329,4566,7469,7817,8056,8337,8573,8914,9908,10444,10958,11224,
#Partially deleted in new
chr2	219598193	219602709	chr2:219598193-219602709	0	+	219598193	219598193	8553170	6	84,206,75,96,108,5,	0,3041,3447,3794,4274,4511,
#Partially deleted in new
chr2	219598442	219606058	chr2:219598442-219606058	0	+	219598442	219598442	8553170	8	67,206,75,96,108,72,127,103,	0,2792,3198,3545,4025,4262,7165,7513,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	219605506	219606633	chr2:219605506-219606633	0	+	219605506	219605506	8553170	3	228,104,439,	0,449,688,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	219605528	219606857	chr2:219605528-219606857	0	+	219605528	219605528	8553170	5	206,104,96,42,146,	0,427,666,947,1183,
#Deleted in new
chr2	219608397	219609472	chr2:219608397-219609472	0	+	219608397	219608397	8553170	3	33,206,376,	0,185,699,
#Deleted in new
chr2	219609145	219610126	chr2:219609145-219610126	0	+	219609145	219610111	789624	3	68,178,59,	0,217,922,
#Deleted in new
chr2	219612042	219615202	chr2:219612042-219615202	0	+	219612042	219614698	789624	6	16,98,179,82,396,109,	0,1085,1709,2118,2433,3051,
#Deleted in new
chr2	219613050	219614720	chr2:219613050-219614720	0	+	219613050	219613050	8553170	4	175,179,82,245,	0,701,1110,1425,
#Deleted in new
chr2	219613915	219615995	chr2:219613915-219615995	0	+	219613915	219615790	789624	5	15,82,71,248,289,	0,245,560,1178,1791,
#Deleted in new
chr2	219614805	219616212	chr2:219614805-219616212	0	+	219614805	219614805	8553170	2	536,169,	0,1238,
#Partially deleted in new
chr2	219625058	219626693	chr2:219625058-219626693	3	-	219625058	219625058	8553170	2	70,201,	0,1434,
#Partially deleted in new
chr2	219627326	219641971	chr2:219627326-219641971	1	+	219627992	219641728	789624	23	419,144,166,278,116,200,149,181,136,184,100,185,226,219,149,195,231,90,167,254,170,174,321,	0,573,1078,1817,2253,2826,4641,4935,5547,5947,6553,7093,7944,8346,8975,9353,10254,10837,11376,12155,13103,13462,14324,
#Partially deleted in new
chr2	219627393	219641971	chr2:219627393-219641971	1	+	219627992	219641728	789624	23	99,144,166,278,116,200,149,181,136,184,100,185,226,219,149,195,231,90,167,254,170,174,321,	0,506,1011,1750,2186,2759,4574,4868,5480,5880,6486,7026,7877,8279,8908,9286,10187,10770,11309,12088,13036,13395,14257,
#Partially deleted in new
chr2	219627564	219641980	chr2:219627564-219641980	3	+	219627992	219641728	789624	23	181,84,166,278,116,281,149,181,136,184,100,185,226,219,149,195,231,90,167,254,170,174,330,	0,395,840,1579,2015,2507,4403,4697,5309,5709,6315,6855,7706,8108,8737,9115,10016,10599,11138,11917,12865,13224,14086,
#Partially deleted in new
chr2	219627626	219641728	chr2:219627626-219641728	0	+	219627992	219633950	789624	23	119,144,166,278,116,200,149,181,136,184,125,185,226,219,149,195,231,90,167,254,170,174,78,	0,273,778,1517,1953,2526,4341,4635,5247,5647,6228,6793,7644,8046,8675,9053,9954,10537,11076,11855,12803,13162,14024,
#Partially deleted in new
chr2	219627660	219641980	chr2:219627660-219641980	1	+	219627992	219641728	789624	23	85,84,166,278,116,200,149,181,136,184,100,185,226,219,149,195,231,90,167,254,170,174,330,	0,299,744,1483,1919,2492,4307,4601,5213,5613,6219,6759,7610,8012,8641,9019,9920,10503,11042,11821,12769,13128,13990,
#Deleted in new
chr2	219628515	219632418	chr2:219628515-219632418	0	+	219628515	219628515	8553170	4	251,278,149,157,	0,628,3452,3746,
#Deleted in new
chr2	219631129	219633009	chr2:219631129-219633009	0	+	219631238	219633009	789624	4	326,149,181,136,	0,838,1132,1744,
#Deleted in new
chr2	219632058	219637795	chr2:219632058-219637795	0	+	219632058	219633928	789624	11	58,181,136,184,114,185,226,219,149,195,215,	0,203,815,1215,1807,2361,3212,3614,4243,4621,5522,
#Deleted in new
chr2	219633345	219635781	chr2:219633345-219635781	0	+	219633345	219635281	789624	4	112,100,226,109,	0,534,1925,2327,
#Deleted in new
chr2	219645089	219645631	chr2:219645089-219645631	3	+	219645089	219645089	8553170	1	542,	0,
#Deleted in new
chr2	219684029	219684795	chr2:219684029-219684795	7	-	219684029	219684029	16724991	1	766,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	219685380	219687345	chr2:219685380-219687345	1	+	219685380	219685380	8553170	1	1965,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	219685491	219737937	chr2:219685491-219737937	3	+	219685491	219685491	8553170	2	118,484,	0,51962,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	219686986	219714686	chr2:219686986-219714686	1	+	219686986	219686986	8553170	2	66,430,	0,27270,
#Deleted in new
chr2	219697798	219698214	chr2:219697798-219698214	7	+	219697798	219697798	16724991	1	416,	0,
#Partially deleted in new
chr2	219730109	219737742	chr2:219730109-219737742	1	+	219730109	219730109	8553170	2	72,289,	0,7344,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	219904050	219904889	chr2:219904050-219904889	3	-	219904050	219904050	789624	3	103,135,375,	0,194,464,
#Deleted in new
chr2	219906501	219906565	chr2:219906501-219906565	3	-	219906501	219906501	5263520	1	64,	0,
#Deleted in new
chr2	220048821	220049272	chr2:220048821-220049272	7	-	220048821	220048821	16724991	1	451,	0,
#Partially deleted in new
chr2	220105655	220450778	chr2:220105655-220450778	3	+	220105655	220105655	8553170	4	306,121,150,177,	0,216445,344643,344946,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	220127545	220212491	chr2:220127545-220212491	3	+	220127545	220127545	8553170	3	139,73,135,	0,10245,84811,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	220450678	220704566	chr2:220450678-220704566	3	+	220450678	220450678	8553170	5	368,182,151,197,1164,	0,179700,181978,183253,252724,
#Partially deleted in new
chr2	220791077	220797893	chr2:220791077-220797893	3	+	220791077	220791077	8553170	2	79,433,	0,6383,
#Deleted in new
chr2	221162770	221163053	chr2:221162770-221163053	7	+	221162770	221162770	16724991	1	283,	0,
#Partially deleted in new
chr2	221418026	221425575	chr2:221418026-221425575	0	-	221418026	221418026	8553170	2	2526,367,	0,7182,
#Partially deleted in new
chr2	221418028	221572290	chr2:221418028-221572290	3	-	221426027	221572248	0	18	2524,934,156,194,150,210,62,186,114,59,112,160,125,339,156,664,68,133,	0,7180,8435,11929,16113,18370,19032,24800,25464,28094,37518,38584,39837,64323,82988,145702,150689,154129,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	221420444	221425540	chr2:221420444-221425540	0	-	221420444	221420444	8553170	3	108,91,332,	0,1535,4764,
#Partially deleted in new
chr2	221425598	221572283	chr2:221425598-221572283	1	-	221426459	221572248	789624	17	544,185,194,150,210,62,186,114,59,112,160,125,339,156,664,68,126,	0,836,4359,8543,10800,11462,17230,17894,20524,29948,31014,32267,56753,75418,138132,143119,146559,
#Partially deleted in new
chr2	221425900	221574202	chr2:221425900-221574202	1	-	221426027	221572248	0	18	242,156,194,150,210,62,186,114,59,112,160,125,339,156,664,68,124,242,	0,563,4057,8241,10498,11160,16928,17592,20222,29646,30712,31965,56451,75116,137830,142817,146257,148060,
#Partially deleted in new
chr2	221425914	221434249	chr2:221425914-221434249	0	-	221426613	221434249	789624	3	228,156,108,	0,549,8227,
#Deleted in new
chr2	221436456	221437496	chr2:221436456-221437496	0	-	221436456	221436456	8553170	2	152,436,	0,604,
#Partially deleted in new
chr2	221457888	221572300	chr2:221457888-221572300	0	-	221457888	221572248	789624	3	102,339,143,	0,24463,114269,
#Partially deleted in new
chr2	221457953	221502560	chr2:221457953-221502560	0	-	221457953	221502560	789624	4	37,339,156,33,	0,24398,43063,44574,
#Partially deleted in new
chr2	221482439	221501344	chr2:221482439-221501344	0	-	221482439	221482439	8553170	2	251,328,	0,18577,
#Deleted in new
chr2	221532667	221533008	chr2:221532667-221533008	7	+	221532667	221532667	16724991	1	341,	0,
#Deleted in new
chr2	221563992	221572300	chr2:221563992-221572300	0	-	221564368	221572248	789624	2	402,143,	0,8165,
#Deleted in new
chr2	221563996	221569481	chr2:221563996-221569481	0	-	221563996	221564376	789624	3	398,68,86,	0,4721,5399,
#Deleted in new
chr2	221564105	221572358	chr2:221564105-221572358	0	-	221564105	221572248	789624	3	289,68,201,	0,4612,8052,
#Deleted in new
chr2	221564278	221574158	chr2:221564278-221574158	0	-	221564278	221572248	789624	4	116,68,124,309,	0,4439,7879,9571,
#Deleted in new
chr2	221572505	221574454	chr2:221572505-221574454	3	+	221572505	221572505	8553170	1	1949,	0,
#Deleted in new
chr2	221592440	221592861	chr2:221592440-221592861	7	+	221592440	221592440	16724991	1	421,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	221637542	221641813	chr2:221637542-221641813	3	+	221637542	221637542	8553170	2	55,206,	0,4065,
#Partially deleted in new
chr2	221944222	221944612	chr2:221944222-221944612	7	+	221944222	221944222	16724991	1	390,	0,
#Partially deleted in new
chr2	221961736	221963765	chr2:221961736-221963765	7	+	221961736	221961736	16724991	1	2029,	0,
#Deleted in new
chr2	222044524	222044994	chr2:222044524-222044994	7	-	222044524	222044524	16724991	1	470,	0,
#Partially deleted in new
chr2	222199887	222298981	chr2:222199887-222298981	1	-	222201173	222298615	0	10	1353,31,247,215,166,206,135,130,236,451,	0,1524,2056,20252,21334,32190,94279,95640,97090,98643,
#Partially deleted in new
chr2	222200985	222298996	chr2:222200985-222298996	3	-	222201407	222298615	0	9	457,247,215,166,206,135,130,236,466,	0,958,19154,20236,31092,93181,94542,95992,97545,
#Partially deleted in new
chr2	222201110	222298659	chr2:222201110-222298659	1	-	222201220	222298615	0	9	130,31,215,166,206,135,130,236,129,	0,301,19029,20111,30967,93056,94417,95867,97420,
#Partially deleted in new
chr2	222201152	222221713	chr2:222201152-222221713	0	-	222201152	222201152	8553170	6	88,31,247,215,166,230,	0,259,791,18987,20069,20331,
#Partially deleted in new
chr2	222201152	222221715	chr2:222201152-222221715	0	-	222201152	222201152	8553170	6	88,31,247,215,166,118,	0,259,791,18987,20069,20445,
#Partially deleted in new
chr2	222201165	222242688	chr2:222201165-222242688	0	-	222201165	222201165	8553170	7	277,247,215,166,206,89,311,	0,778,18974,20056,30912,31803,41212,
#Partially deleted in new
chr2	222201331	222298659	chr2:222201331-222298659	1	-	222201403	222298615	0	8	111,215,166,206,135,130,236,129,	0,18808,19890,30746,92835,94196,95646,97199,
#Partially deleted in new
chr2	222201357	222298895	chr2:222201357-222298895	1	-	222201407	222298615	0	9	85,247,215,166,206,135,127,236,365,	0,586,18782,19864,30720,92809,94170,95620,97173,
#Partially deleted in new
chr2	222201712	222298752	chr2:222201712-222298752	1	-	222201923	222298615	0	8	478,215,166,206,135,130,236,222,	0,18427,19509,30365,92454,93815,95265,96818,
#Partially deleted in new
chr2	222202136	222221410	chr2:222202136-222221410	0	-	222202136	222202136	8553170	3	54,215,189,	0,18003,19085,
#Partially deleted in new
chr2	222214386	222221547	chr2:222214386-222221547	0	-	222214386	222214386	8553170	4	424,215,166,64,	0,5753,6835,7097,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	222262543	222294194	chr2:222262543-222294194	0	-	222262543	222262543	8553170	3	2582,154,28,	0,24832,31623,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	222263184	222298996	chr2:222263184-222298996	0	-	222263184	222263184	8553170	5	1941,135,130,236,466,	0,30982,32343,33793,35346,
#Deleted in new
chr2	222293629	222298746	chr2:222293629-222298746	1	-	222294104	222298615	0	4	672,130,236,216,	0,1898,3348,4901,
#Deleted in new
chr2	222293634	222298865	chr2:222293634-222298865	1	-	222293722	222298615	0	5	123,135,130,236,335,	0,532,1893,3343,4896,
#Deleted in new
chr2	222298146	222305217	chr2:222298146-222305217	3	+	222303902	222304394	789624	2	227,1472,	0,5599,
#Deleted in new
chr2	222298146	222305217	chr2:222298146-222305217	0	+	222298146	222298146	8553170	2	227,1472,	0,5599,
#Deleted in new
chr2	222302977	222303953	chr2:222302977-222303953	0	+	222302977	222302977	8553170	2	233,208,	0,768,
#Deleted in new
chr2	222317241	222318653	chr2:222317241-222318653	3	-	222317241	222317241	8553170	1	1412,	0,
#Deleted in new
chr2	222318274	222321512	chr2:222318274-222321512	5	+	222318274	222318274	16724991	2	1096,46,	0,3192,
#Deleted in new
chr2	222318470	222321722	chr2:222318470-222321722	4	+	222318470	222318470	16724991	2	900,256,	0,2996,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	222318700	222342541	chr2:222318700-222342541	4	+	222318700	222318700	16724991	2	198,350,	0,23491,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	222319297	222352989	chr2:222319297-222352989	7	+	222319297	222319297	16724991	3	73,502,10,	0,22894,33682,
#Deleted in new
chr2	222320673	222321659	chr2:222320673-222321659	4	+	222320673	222320673	16724991	2	156,193,	0,793,
#Deleted in new
chr2	222320693	222321722	chr2:222320693-222321722	4	+	222320693	222320693	16724991	2	571,256,	0,773,
#Deleted in new
chr2	222320862	222321722	chr2:222320862-222321722	4	+	222320862	222320862	16724991	2	146,256,	0,604,
#Deleted in new
chr2	222321105	222321538	chr2:222321105-222321538	4	+	222321105	222321105	16724991	2	159,184,	0,249,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	222404984	222405095	chr2:222404984-222405095	3	+	222404984	222404984	8553170	1	111,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	222424516	222560948	chr2:222424516-222560948	3	+	222424602	222558898	789624	5	305,159,180,90,2602,	0,50051,97250,100427,133830,
#Deleted in new
chr2	222452399	222453126	chr2:222452399-222453126	7	-	222452399	222452399	16724991	1	727,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	222498290	222498398	chr2:222498290-222498398	3	+	222498290	222498290	8553170	1	108,	0,
#Partially deleted in new
chr2	222503882	222504843	chr2:222503882-222504843	7	-	222503882	222503882	16724991	1	961,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	222566898	222569719	chr2:222566898-222569719	3	-	222566898	222566898	8553170	1	2821,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	222570535	222656337	chr2:222570535-222656337	3	-	222571870	222656073	0	17	1487,156,118,93,81,208,62,52,62,71,109,151,116,70,155,56,322,	0,29392,43275,49109,53114,53736,54178,58301,59577,61068,62663,63855,69044,70326,72315,78204,85480,
#Partially deleted in new
chr2	222671785	222709930	chr2:222671785-222709930	3	+	222671785	222709890	789624	6	94,179,205,175,200,195,	0,16558,17479,22576,23303,37950,
#Deleted in new
chr2	222677676	222678289	chr2:222677676-222678289	7	-	222677676	222677676	16724991	1	613,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	222698622	222699484	chr2:222698622-222699484	7	-	222698622	222698622	16724991	1	862,	0,
#Deleted in new
chr2	222726456	222726834	chr2:222726456-222726834	7	+	222726456	222726456	16724991	1	378,	0,
#Partially deleted in new
chr2	222860933	222944639	chr2:222860933-222944639	3	+	222908772	222941654	789624	17	325,59,107,418,178,110,139,151,124,72,140,173,75,192,115,158,3143,	0,26896,39740,47799,55385,57112,58130,60346,61774,62144,63522,66083,67928,69687,72232,73596,80563,
#Partially deleted in new
chr2	222860941	222942222	chr2:222860941-222942222	1	+	222908772	222941654	789624	16	317,59,418,178,110,139,151,124,72,140,173,75,192,115,158,726,	0,26888,47791,55377,57104,58122,60338,61766,62136,63514,66075,67920,69679,72224,73588,80555,
#Partially deleted in new
chr2	222861025	222909059	chr2:222861025-222909059	0	+	222908772	222909059	789624	2	233,327,	0,47707,
#Partially deleted in new
chr2	222861562	222909036	chr2:222861562-222909036	0	+	222908772	222909036	789624	4	180,59,107,304,	0,26267,39111,47170,
#Deleted in new
chr2	222904639	222905055	chr2:222904639-222905055	7	-	222904639	222904639	16724991	1	416,	0,
#Partially deleted in new
chr2	222909084	222916680	chr2:222909084-222916680	0	+	222909084	222909084	8553170	2	66,362,	0,7234,
#Partially deleted in new
chr2	222909615	222921353	chr2:222909615-222921353	0	+	222916396	222921353	789624	5	123,178,110,139,74,	0,6703,8430,9448,11664,
#Deleted in new
chr2	222917386	222919363	chr2:222917386-222919363	3	-	222917386	222917386	8553170	2	403,134,	0,1843,
#Deleted in new
chr2	222917687	222919104	chr2:222917687-222919104	0	+	222917687	222917687	8553170	2	468,41,	0,1376,
#Partially deleted in new
chr2	222920953	222927053	chr2:222920953-222927053	0	+	222920953	222920953	8553170	6	115,151,124,72,140,37,	0,326,1754,2124,3502,6063,
#Partially deleted in new
chr2	222924553	222941527	chr2:222924553-222941527	0	+	222924553	222930633	789624	5	42,192,115,158,31,	0,6067,8612,9976,16943,
#Partially deleted in new
chr2	222930610	222933723	chr2:222930610-222933723	0	+	222930610	222930610	8553170	2	202,558,	0,2555,
#Partially deleted in new
chr2	222933017	222941824	chr2:222933017-222941824	0	+	222933017	222933017	8553170	3	263,158,328,	0,1512,8479,
#Deleted in new
chr2	222945929	222946388	chr2:222945929-222946388	7	-	222945929	222945929	16724991	1	459,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	223051813	223055637	chr2:223051813-223055637	3	+	223052144	223053343	789624	2	461,2830,	0,994,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	223052199	223198399	chr2:223052199-223198399	0	+	223052199	223052199	8553170	4	75,114,117,602,	0,8390,140869,145598,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	223248497	223248794	chr2:223248497-223248794	3	-	223248497	223248497	8553170	1	297,	0,
#Deleted in new
chr2	223398266	223398546	chr2:223398266-223398546	7	-	223398266	223398266	16724991	1	280,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	223498772	223504611	chr2:223498772-223504611	3	+	223498772	223498772	8553170	3	84,94,630,	0,387,5209,
#Partially deleted in new
chr2	223505475	223510933	chr2:223505475-223510933	3	+	223505475	223505475	8553170	2	82,705,	0,4753,
#Partially deleted in new
chr2	223596939	223602503	chr2:223596939-223602503	3	-	223597428	223599282	789624	2	2357,219,	0,5345,
#Partially deleted in new
chr2	223598850	223602284	chr2:223598850-223602284	0	-	223598850	223599282	789624	2	446,143,	0,3291,
#Partially deleted in new
chr2	223598905	223602361	chr2:223598905-223602361	0	-	223598905	223599282	789624	3	391,76,77,	0,3236,3379,
#Deleted in new
chr2	223704620	223705338	chr2:223704620-223705338	7	+	223704620	223704620	16724991	1	718,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	223751685	223837602	chr2:223751685-223837602	1	-	223752823	223837450	0	5	1204,138,109,179,155,	0,13527,24215,26005,85762,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	223756988	223837735	chr2:223756988-223837735	0	-	223773327	223837450	0	6	1762,138,39,109,179,288,	0,8224,16324,18912,20702,80459,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	223756989	223837570	chr2:223756989-223837570	0	-	223765286	223837450	789624	4	1761,138,179,123,	0,8223,20701,80458,
#Partially deleted in new
chr2	223758481	223837582	chr2:223758481-223837582	3	-	223758714	223837450	0	5	269,138,109,179,135,	0,6731,17419,19209,78966,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	223765077	223837582	chr2:223765077-223837582	1	-	223765342	223837450	789624	3	273,181,135,	0,12611,72370,
#Partially deleted in new
chr2	223765176	223837484	chr2:223765176-223837484	1	-	223765176	223837450	0	4	174,109,179,37,	0,10724,12514,72271,
#Partially deleted in new
chr2	223765267	223838027	chr2:223765267-223838027	0	-	223765267	223776135	789624	4	83,110,179,189,	0,10781,12423,72571,
#Partially deleted in new
chr2	223765309	223837541	chr2:223765309-223837541	1	-	223770202	223837450	789624	5	41,129,109,179,94,	0,4887,10591,12381,72138,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	223855715	223878688	chr2:223855715-223878688	0	-	223855715	223855715	8553170	2	201,160,	0,22813,
#Partially deleted in new
chr2	223875346	223945387	chr2:223875346-223945387	3	-	223878670	223945284	789624	12	3384,109,131,102,106,127,113,151,55,74,68,240,	0,4777,6595,9301,18887,20157,23611,25836,30600,36906,42596,69801,
#Partially deleted in new
chr2	223884668	223894460	chr2:223884668-223894460	0	-	223884668	223884668	8553170	2	81,227,	0,9565,
#Partially deleted in new
chr2	223894234	223899276	chr2:223894234-223899276	0	-	223894234	223894234	8553170	3	105,127,319,	0,1269,4723,
#Partially deleted in new
chr2	223894289	223945357	chr2:223894289-223945357	0	-	223894289	223945284	789624	6	50,127,113,151,68,210,	0,1214,4668,6893,23653,50858,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	223900854	223945335	chr2:223900854-223945335	0	-	223900854	223900854	8553170	5	479,55,74,68,188,	0,5092,11398,17088,44293,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	223957403	223967714	chr2:223957403-223967714	3	+	223957472	223967034	0	4	248,469,179,852,	0,2130,6352,9459,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	223965700	223967706	chr2:223965700-223967706	3	-	223965700	223965700	8553170	2	204,225,	0,1781,
#Partially deleted in new
chr2	223975111	224039319	chr2:223975111-224039319	3	-	223975866	224001900	0	9	793,84,90,101,199,198,228,281,221,	0,2432,5199,7569,9640,16691,23003,26530,63987,
#Partially deleted in new
chr2	223975111	224039288	chr2:223975111-224039288	1	-	223975866	224001900	0	9	793,84,87,101,199,198,228,281,190,	0,2432,5199,7569,9640,16691,23003,26530,63987,
#Partially deleted in new
chr2	223975152	224031478	chr2:223975152-224031478	1	-	223975866	224001900	0	10	752,84,87,101,199,198,228,281,136,503,	0,2391,5158,7528,9599,16650,22962,26489,54919,55823,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	223975152	223982780	chr2:223975152-223982780	0	-	223975152	223975152	8553170	2	752,5237,	0,2391,
#Partially deleted in new
chr2	223975681	224038804	chr2:223975681-224038804	1	-	223975866	224038503	0	9	223,84,87,101,199,198,228,281,315,	0,1862,4629,6999,9070,16121,22433,25960,62808,
#Partially deleted in new
chr2	223975813	223985068	chr2:223975813-223985068	0	-	223975813	223975813	8553170	5	91,84,87,101,317,	0,1730,4497,6867,8938,
#Partially deleted in new
chr2	223984808	224013949	chr2:223984808-224013949	0	-	223984808	224001900	789624	6	142,198,228,281,44,95,	0,6994,13306,16833,25534,29046,
#Partially deleted in new
chr2	224001551	224039290	chr2:224001551-224039290	0	-	224001551	224001551	8553170	2	371,192,	0,37547,
#Partially deleted in new
chr2	224001640	224039318	chr2:224001640-224039318	0	-	224001640	224001900	789624	3	282,44,220,	0,8702,37458,
#Partially deleted in new
chr2	224001773	224030801	chr2:224001773-224030801	0	-	224001773	224001900	789624	2	149,432,	0,28596,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	224169663	224171537	chr2:224169663-224171537	7	+	224169663	224169663	16724991	1	1874,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	224294929	224295753	chr2:224294929-224295753	7	+	224294929	224294929	16724991	1	824,	0,
#Partially deleted in new
chr2	224378697	224401994	chr2:224378697-224401994	3	-	224400418	224401768	789624	3	1511,125,958,	0,21683,22339,
#Partially deleted in new
chr2	224378697	224402034	chr2:224378697-224402034	1	-	224379572	224401768	789624	2	1511,998,	0,22339,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	224399524	224402085	chr2:224399524-224402085	1	-	224400418	224401768	789624	2	981,1049,	0,1512,
#Partially deleted in new
chr2	224464681	224474491	chr2:224464681-224474491	0	+	224464681	224464681	8553170	2	241,511,	0,9299,
#Partially deleted in new
chr2	224467802	224474500	chr2:224467802-224474500	3	+	224467802	224467802	8553170	3	53,202,520,	0,5124,6178,
#Partially deleted in new
chr2	224470149	224585348	chr2:224470149-224585348	3	-	224474244	224585009	0	16	4227,146,187,135,97,125,108,171,177,146,229,115,161,114,198,405,	0,8050,11742,25682,27603,30213,32815,33502,35806,36708,41204,43374,44462,65378,87509,114794,
#Partially deleted in new
chr2	224470149	224585397	chr2:224470149-224585397	1	-	224474244	224585009	0	15	4227,146,187,135,97,125,108,171,177,146,229,115,161,114,454,	0,8050,11742,25682,27603,30213,32815,33502,35806,36708,41204,43374,44462,65378,114794,
#Partially deleted in new
chr2	224473901	224480124	chr2:224473901-224480124	0	-	224473901	224473901	8553170	2	475,1925,	0,4298,
#Partially deleted in new
chr2	224473909	224495906	chr2:224473909-224495906	0	-	224478288	224495906	789624	3	467,146,75,	0,4290,21922,
#Partially deleted in new
chr2	224473921	224569825	chr2:224473921-224569825	1	-	224474244	224557850	0	16	455,146,187,135,97,125,108,171,177,146,229,115,161,114,198,137,	0,4278,7970,21910,23831,26441,29043,29730,32034,32936,37432,39602,40690,61606,83737,95767,
#Partially deleted in new
chr2	224473933	224505971	chr2:224473933-224505971	1	-	224474244	224503752	789624	10	443,146,187,135,97,125,108,21,148,16,	0,4266,7958,21898,23819,26429,29031,29718,29741,32022,
#Partially deleted in new
chr2	224473938	224563299	chr2:224473938-224563299	1	-	224474244	224557850	0	16	438,146,187,135,97,125,108,171,177,146,229,115,161,114,198,600,	0,4261,7953,21893,23814,26424,29026,29713,32017,32919,37415,39585,40673,61589,83720,88761,
#Partially deleted in new
chr2	224474032	224497819	chr2:224474032-224497819	0	-	224474244	224497819	789624	3	344,135,67,	0,21799,23720,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	224495005	224500397	chr2:224495005-224500397	0	-	224495005	224495005	8553170	3	961,97,35,	0,2747,5357,
#Deleted in new
chr2	224499386	224500100	chr2:224499386-224500100	7	-	224499386	224499386	16724991	1	714,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	224502991	224504324	chr2:224502991-224504324	0	-	224502991	224502991	8553170	2	81,673,	0,660,
#Partially deleted in new
chr2	224505748	224511411	chr2:224505748-224511411	0	-	224505748	224505748	8553170	3	384,146,58,	0,1109,5605,
#Partially deleted in new
chr2	224511437	224533094	chr2:224511437-224533094	0	-	224511437	224511437	8553170	4	145,115,161,114,	0,2086,3174,21543,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	224513614	224557820	chr2:224513614-224557820	0	-	224556414	224557820	789624	5	24,161,114,126,162,	0,997,21913,42680,44044,
#Partially deleted in new
chr2	224514635	224563320	chr2:224514635-224563320	0	-	224514635	224563320	789624	4	137,114,198,127,	0,20892,43023,48558,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	224535606	224560668	chr2:224535606-224560668	0	-	224535606	224535606	8553170	4	35,95,198,229,	0,20688,22052,24833,
#Partially deleted in new
chr2	224703763	224716365	chr2:224703763-224716365	3	-	224703763	224716365	789624	3	124,247,235,	0,6209,12367,
#Partially deleted in new
chr2	224765089	225042442	chr2:224765089-225042442	1	-	224765720	225042374	789624	56	748,139,101,191,211,147,114,123,107,99,58,216,111,183,138,113,125,102,48,67,115,122,112,117,176,45,97,84,147,72,114,70,119,93,87,122,124,93,66,188,80,123,83,123,222,156,84,86,184,135,123,73,83,90,120,191,	0,5121,5455,8067,9815,13048,21932,22185,23974,27884,28310,29789,31226,31874,32742,35061,36826,39022,39704,39968,40116,40318,41036,42578,42821,49230,51527,54356,58411,65451,69060,72672,74864,76714,79663,80113,80429,84417,87287,87845,89873,91770,97574,99463,99776,108906,109176,109576,110948,120581,120973,121369,131205,151605,166459,277162,
#Partially deleted in new
chr2	224765089	224947065	chr2:224765089-224947065	3	-	224765720	224946951	789624	56	748,139,101,191,211,147,114,123,107,99,58,216,111,183,138,113,125,102,48,67,115,122,112,117,176,45,97,84,147,72,114,70,119,93,87,122,124,93,66,188,80,123,83,123,222,156,84,86,184,135,123,73,83,90,120,219,	0,5121,5455,8067,9815,13048,21932,22185,23974,27884,28310,29789,31226,31874,32742,35061,36826,39022,39704,39968,40116,40318,41036,42578,42821,49230,51527,54356,58411,65451,69060,72672,74864,76714,79663,80113,80429,84417,87287,87845,89873,91770,97574,99463,99776,108906,109176,109576,110948,120581,120973,121369,131205,151605,166459,181757,
#Partially deleted in new
chr2	224765103	224982427	chr2:224765103-224982427	0	-	224886489	224982368	789624	57	734,76,139,101,191,211,147,114,123,107,99,58,216,111,183,138,113,125,102,48,67,115,95,112,117,176,45,97,84,147,72,114,70,119,93,87,122,124,93,66,188,80,123,83,123,222,156,84,86,184,135,123,68,83,90,120,221,	0,3768,5107,5441,8053,9801,13034,21918,22171,23960,27870,28296,29775,31212,31860,32728,35047,36812,39008,39690,39954,40102,40304,41022,42564,42807,49216,51513,54342,58397,65437,69046,72658,74850,76700,79649,80099,80415,84403,87273,87831,89859,91756,97560,99449,99762,108892,109162,109562,110934,120567,120959,121355,131191,151591,166445,217103,
#Partially deleted in new
chr2	224765103	224982427	chr2:224765103-224982427	1	-	224765720	224982368	789624	56	734,139,101,191,211,147,114,123,107,99,58,216,111,183,138,113,125,102,48,67,115,122,112,117,176,45,97,84,147,72,114,70,119,93,87,122,124,93,66,188,80,123,83,123,222,156,84,86,184,135,123,73,83,90,120,221,	0,5107,5441,8053,9801,13034,21918,22171,23960,27870,28296,29775,31212,31860,32728,35047,36812,39008,39690,39954,40102,40304,41022,42564,42807,49216,51513,54342,58397,65437,69046,72658,74850,76700,79649,80099,80415,84403,87273,87831,89859,91756,97560,99449,99762,108892,109162,109562,110934,120567,120959,121355,131191,151591,166445,217103,
#Partially deleted in new
chr2	224773240	224787118	chr2:224773240-224787118	0	-	224773240	224787118	789624	5	107,211,147,6,97,	0,1664,4897,11496,13781,
#Deleted in new
chr2	224792973	224795126	chr2:224792973-224795126	0	-	224792973	224792973	8553170	3	99,58,248,	0,426,1905,
#Partially deleted in new
chr2	224800161	224816652	chr2:224800161-224816652	0	-	224800161	224816652	789624	12	102,125,102,48,67,115,95,112,117,176,45,36,	0,1754,3950,4632,4896,5044,5246,5964,7506,7749,14158,16455,
#Deleted in new
chr2	224807244	224807933	chr2:224807244-224807933	0	-	224807244	224807244	8553170	2	540,23,	0,666,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	224837728	224840205	chr2:224837728-224840205	0	-	224837728	224837728	8553170	2	103,252,	0,2225,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	224860579	225042442	chr2:224860579-225042442	0	-	224860579	224860579	8553170	14	2167,123,222,156,84,86,184,135,123,73,83,90,120,191,	0,3973,4286,13416,13686,14086,15458,25091,25483,25879,35715,56115,70969,181672,
#Partially deleted in new
chr2	224874699	224886254	chr2:224874699-224886254	0	-	224874699	224874699	8553170	4	52,184,135,192,	0,1338,10971,11363,
#Partially deleted in new
chr2	224893341	224946905	chr2:224893341-224946905	0	-	224893341	224893341	8553170	5	311,83,90,120,59,	0,2953,23353,38207,53505,
#Partially deleted in new
chr2	224893547	225042445	chr2:224893547-225042445	0	-	224893639	225042374	789624	5	105,83,90,120,194,	0,2747,23147,38001,148704,
#Partially deleted in new
chr2	224983414	225042384	chr2:224983414-225042384	0	-	224983803	225042374	789624	2	395,133,	0,58837,
#Deleted in new
chr2	225010460	225010540	chr2:225010460-225010540	3	-	225010460	225010460	5263520	1	80,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	225399709	225654018	chr2:225399709-225654018	3	+	225408880	225651565	789624	7	546,483,238,302,1095,210,2587,	0,851,9154,113661,182231,227207,251722,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	225400885	225654018	chr2:225400885-225654018	1	+	225408880	225651565	789624	6	158,238,302,1095,210,2587,	0,7978,112485,181055,226031,250546,
#Deleted in new
chr2	225698253	225698539	chr2:225698253-225698539	7	+	225698253	225698253	16724991	1	286,	0,
#Deleted in new
chr2	225698513	225703654	chr2:225698513-225703654	3	+	225698513	225698513	8553170	1	5141,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	225761558	225762112	chr2:225761558-225762112	3	+	225761558	225761558	8553170	1	554,	0,
#Deleted in new
chr2	225992980	225993197	chr2:225992980-225993197	7	-	225992980	225992980	16724991	1	217,	0,
#Partially deleted in new
chr2	226180043	226185371	chr2:226180043-226185371	3	-	226180043	226180043	8553170	2	1082,52,	0,5276,
#Deleted in new
chr2	226658709	226658793	chr2:226658709-226658793	3	-	226658709	226658709	5263520	1	84,	0,
#Partially deleted in new
chr2	226731316	226799759	chr2:226731316-226799759	3	-	226795009	226798738	0	2	4934,4771,	0,63672,
#Partially deleted in new
chr2	226792137	226795246	chr2:226792137-226795246	0	-	226792137	226792137	8553170	2	248,258,	0,2851,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	226800145	226811029	chr2:226800145-226811029	3	+	226800145	226800145	8553170	4	77,140,249,118,	0,7340,8243,10766,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	226804035	226805061	chr2:226804035-226805061	3	+	226804035	226804035	8553170	1	1026,	0,
#Partially deleted in new
chr2	226835580	226865097	chr2:226835580-226865097	0	+	226864693	226865097	789624	2	83,494,	0,29023,
#Partially deleted in new
chr2	226835935	226999215	chr2:226835935-226999215	3	+	226864693	226995522	0	7	152,523,133,89,57,144,3785,	0,28668,31250,70857,72886,78272,159495,
#Partially deleted in new
chr2	226835954	226999201	chr2:226835954-226999201	1	+	226864693	226995522	0	9	133,82,219,523,133,89,57,144,3771,	0,2118,3454,28649,31231,70838,72867,78253,159476,
#Partially deleted in new
chr2	226836033	226864844	chr2:226836033-226864844	0	+	226864693	226864844	789624	4	54,82,219,241,	0,2039,3375,28570,
#Partially deleted in new
chr2	226836043	226864711	chr2:226836043-226864711	0	+	226864693	226864711	8553170	3	44,219,108,	0,3365,28560,
#Partially deleted in new
chr2	226836049	226867206	chr2:226836049-226867206	0	+	226864693	226867206	789624	3	38,497,21,	0,28580,31136,
#Partially deleted in new
chr2	226836055	226865065	chr2:226836055-226865065	0	+	226864693	226865065	789624	3	32,82,462,	0,2017,28548,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	226836081	226839626	chr2:226836081-226839626	0	+	226836081	226836081	8553170	3	118,223,218,	0,1466,3327,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	226837523	226839607	chr2:226837523-226839607	0	+	226837523	226837523	8553170	2	315,199,	0,1885,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	226837547	226864856	chr2:226837547-226864856	0	+	226864693	226864856	789624	4	223,82,219,253,	0,525,1861,27056,
#Partially deleted in new
chr2	226906711	226988498	chr2:226906711-226988498	1	+	226906724	226988447	789624	4	170,57,144,167,	0,2110,7496,81620,
#Partially deleted in new
chr2	226906746	226995755	chr2:226906746-226995755	0	+	226906746	226906746	8553170	4	275,57,144,325,	0,2075,7461,88684,
#Partially deleted in new
chr2	226906850	226914637	chr2:226906850-226914637	0	+	226906850	226906850	8553170	3	31,57,430,	0,1971,7357,
#Partially deleted in new
chr2	226908220	226995901	chr2:226908220-226995901	0	+	226908220	226908220	8553170	4	331,57,144,471,	0,601,5987,87210,
#Partially deleted in new
chr2	226935198	226995675	chr2:226935198-226995675	0	+	226935198	226935198	8553170	2	227,245,	0,60232,
#Deleted in new
chr2	226968988	226969122	chr2:226968988-226969122	3	-	226968988	226968988	8553170	1	134,	0,
#Partially deleted in new
chr2	227002710	227164236	chr2:227002710-227164236	3	-	227007324	227147483	789624	48	4878,287,189,117,126,9,108,156,111,129,72,108,108,75,64,182,108,144,171,162,219,108,69,184,107,73,164,90,165,105,70,54,45,60,54,81,42,36,63,36,69,117,45,135,78,43,172,230,	0,5307,7602,9470,19337,23091,25191,27732,29234,29437,30699,39437,40366,44764,47357,48266,49594,51883,53234,54728,56694,57425,59819,75183,77732,79404,85942,87157,91414,95983,96909,98793,99154,100078,100433,101261,105870,106122,106513,108967,111917,115934,117184,118303,137450,141805,144702,161296,
#Partially deleted in new
chr2	227102830	227164453	chr2:227102830-227164453	0	-	227102830	227147483	789624	15	18,54,81,42,36,63,36,69,117,45,135,78,43,172,58,	0,313,1141,5750,6002,6393,8847,11797,15814,17064,18183,37330,41685,44582,61565,
#Boundary problem: need 52, got 0, diff 52, mapped 0.0
chr2	227164564	227314792	chr2:227164564-227314792	3	+	227164726	227311870	789624	52	249,57,90,45,45,63,54,27,78,63,36,42,78,63,60,45,54,42,85,36,165,93,96,71,183,169,93,105,98,151,114,168,90,135,99,90,140,127,81,99,48,186,131,73,72,126,99,210,178,115,173,3007,	0,73403,75578,79755,80386,81389,82120,82993,83878,86575,86771,88731,88996,89547,90091,91461,91778,93038,95228,96517,99215,101852,102428,105345,106205,108384,111820,112884,115228,115875,116328,117800,119202,119646,124585,125434,126182,128626,129925,130399,130704,133109,134117,138473,139294,139454,140420,143145,144334,144639,146211,147221,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	227221051	227325164	chr2:227221051-227325164	3	-	227221051	227221051	789624	14	433,179,123,152,89,106,770,61,91,142,93,86,196,47,	0,1330,6718,7429,17034,38126,43617,44823,47301,47576,58431,60652,84408,104066,
#Partially deleted in new
chr2	227237776	227259198	chr2:227237776-227259198	0	-	227237776	227237776	8553170	2	398,21,	0,21401,
#Partially deleted in new
chr2	227238107	227265173	chr2:227238107-227265173	0	-	227238107	227238107	8553170	3	67,106,505,	0,21070,26561,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	227245709	227325186	chr2:227245709-227325186	1	-	227245709	227245709	8553170	10	556,106,770,61,142,96,86,182,196,19,	0,13468,18959,20165,22918,33773,35994,56083,59750,79458,
#Partially deleted in new
chr2	227268744	227325201	chr2:227268744-227325201	1	-	227268744	227268744	8553170	4	25,96,86,34,	0,10738,12959,56423,
#Partially deleted in new
chr2	227284303	227291039	chr2:227284303-227291039	0	+	227284303	227284303	8553170	4	42,99,90,293,	0,4846,5695,6443,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	227289157	227294204	chr2:227289157-227294204	0	+	227289157	227293765	789624	5	91,90,140,127,462,	0,841,1589,4033,4585,
#Partially deleted in new
chr2	227296298	227303900	chr2:227296298-227303900	0	+	227296298	227296298	8553170	5	228,186,131,73,42,	0,1375,2383,6739,7560,
#Partially deleted in new
chr2	227297690	227304328	chr2:227297690-227304328	0	+	227297690	227297690	8553170	5	169,131,73,72,310,	0,991,5347,6168,6328,
#Partially deleted in new
chr2	227304020	227311870	chr2:227304020-227311870	0	+	227304020	227309238	789624	6	124,99,210,115,173,85,	0,964,3689,5183,6755,7765,
#Partially deleted in new
chr2	227307771	227311944	chr2:227307771-227311944	0	+	227307771	227311944	789624	4	148,178,115,159,	0,1127,1432,4014,
#Partially deleted in new
chr2	227325150	227330763	chr2:227325150-227330763	0	+	227330665	227330763	789624	4	277,112,54,138,	0,3527,4455,5475,
#Partially deleted in new
chr2	227325168	227357834	chr2:227325168-227357834	1	+	227330665	227357117	789624	9	259,112,221,170,89,159,60,85,849,	0,3509,5457,7250,15123,22057,27345,30508,31817,
#Partially deleted in new
chr2	227325220	227357254	chr2:227325220-227357254	0	+	227325220	227325220	789624	5	207,170,89,85,269,	0,7198,15071,30456,31765,
#Partially deleted in new
chr2	227325233	227332499	chr2:227325233-227332499	0	+	227325233	227325233	8553170	4	194,112,252,81,	0,3444,5361,7185,
#Partially deleted in new
chr2	227325238	227357833	chr2:227325238-227357833	3	+	227329745	227357117	789624	11	189,112,178,221,170,89,75,159,60,85,848,	0,3439,4367,5387,7180,15053,17506,21987,27275,30438,31747,
#Partially deleted in new
chr2	227325249	227357215	chr2:227325249-227357215	1	+	227330665	227357117	789624	7	178,112,221,170,89,85,230,	0,3428,5376,7169,15042,30427,31736,
#Partially deleted in new
chr2	227325250	227347274	chr2:227325250-227347274	0	+	227340327	227347274	789624	5	177,170,89,75,49,	0,7168,15041,17494,21975,
#Partially deleted in new
chr2	227325256	227347379	chr2:227325256-227347379	0	+	227340327	227347379	789624	4	171,170,89,154,	0,7162,15035,21969,
#Partially deleted in new
chr2	227325258	227357799	chr2:227325258-227357799	1	+	227330665	227357117	789624	6	169,221,170,89,85,814,	0,5367,7160,15033,30418,31727,
#Partially deleted in new
chr2	227325260	227340354	chr2:227325260-227340354	0	+	227330665	227340354	789624	4	282,221,170,63,	0,5365,7158,15031,
#Partially deleted in new
chr2	227325261	227357151	chr2:227325261-227357151	1	+	227330665	227357117	789624	9	166,112,178,221,170,89,60,85,166,	0,3416,4344,5364,7157,15030,27252,30415,31724,
#Partially deleted in new
chr2	227325264	227357833	chr2:227325264-227357833	0	+	227325264	227325264	8553170	6	163,2169,170,89,85,848,	0,3413,7154,15027,30412,31721,
#Partially deleted in new
chr2	227325267	227357833	chr2:227325267-227357833	1	+	227330665	227357117	789624	8	160,112,221,170,89,75,85,848,	0,3410,5358,7151,15024,17477,30409,31718,
#Partially deleted in new
chr2	227325270	227340561	chr2:227325270-227340561	0	+	227325270	227325270	8553170	3	157,170,270,	0,7148,15021,
#Partially deleted in new
chr2	227325270	227357131	chr2:227325270-227357131	1	+	227340327	227357117	789624	5	157,170,89,85,146,	0,7148,15021,30406,31715,
#Partially deleted in new
chr2	227325270	227330822	chr2:227325270-227330822	0	+	227330665	227330822	789624	4	157,112,92,197,	0,3407,4335,5355,
#Partially deleted in new
chr2	227325270	227355761	chr2:227325270-227355761	0	+	227340327	227355761	789624	5	157,170,89,75,85,	0,7148,15021,17474,30406,
#Partially deleted in new
chr2	227325275	227357812	chr2:227325275-227357812	1	+	227330665	227357117	789624	8	152,112,221,170,89,60,85,827,	0,3402,5350,7143,15016,27238,30401,31710,
#Partially deleted in new
chr2	227325364	227330689	chr2:227325364-227330689	0	+	227329745	227330689	789624	4	63,222,178,64,	0,3313,4241,5261,
#Partially deleted in new
chr2	227325442	227330801	chr2:227325442-227330801	0	+	227329745	227330801	789624	4	100,112,178,176,	0,3235,4163,5183,
#Partially deleted in new
chr2	227325450	227330845	chr2:227325450-227330845	0	+	227330665	227330845	789624	4	210,112,178,220,	0,3227,4155,5175,
#Partially deleted in new
chr2	227328677	227357836	chr2:227328677-227357836	1	+	227330815	227357117	789624	8	112,178,66,170,89,159,85,851,	0,928,2103,3741,11614,18548,26999,28308,
#Partially deleted in new
chr2	227330700	227347383	chr2:227330700-227347383	0	+	227330700	227330700	8553170	6	146,170,89,75,88,158,	0,1718,9591,12044,15527,16525,
#Partially deleted in new
chr2	227340291	227357381	chr2:227340291-227357381	0	+	227340291	227357117	789624	4	89,159,85,396,	0,6934,15385,16694,
#Partially deleted in new
chr2	227346724	227357833	chr2:227346724-227357833	0	+	227346724	227346724	8553170	4	660,60,85,848,	0,5789,8952,10261,
#Partially deleted in new
chr2	227351680	227357831	chr2:227351680-227357831	0	+	227351680	227351680	8553170	3	893,85,846,	0,3996,5305,
#Deleted in new
chr2	227355297	227357181	chr2:227355297-227357181	0	+	227355297	227355297	8553170	2	464,196,	0,1688,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	227362155	227379306	chr2:227362155-227379306	3	-	227363723	227379268	789624	4	1857,152,66,221,	0,3937,8759,16930,
#Partially deleted in new
chr2	227379225	227381995	chr2:227379225-227381995	0	-	227379225	227379268	789624	2	135,407,	0,2363,
#Partially deleted in new
chr2	227387682	227387949	chr2:227387682-227387949	3	-	227387682	227387949	789624	1	267,	0,
#Deleted in new
chr2	227472131	227472187	chr2:227472131-227472187	3	+	227472131	227472131	5263520	1	56,	0,
#Partially deleted in new
chr2	227472151	227554559	chr2:227472151-227554559	1	+	227472421	227554495	0	14	437,94,116,163,154,120,72,210,181,80,93,159,86,124,	0,19395,47796,51611,52610,58939,59986,61397,62693,64473,64749,79807,81558,82284,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	227472161	227561214	chr2:227472161-227561214	3	+	227472421	227554495	0	13	427,94,116,163,154,120,210,181,80,93,159,92,6779,	0,19385,47786,51601,52600,58929,61387,62683,64463,64739,79797,81542,82274,
#Partially deleted in new
chr2	227472368	227555728	chr2:227472368-227555728	1	+	227472421	227554495	789624	13	220,94,116,163,154,120,210,118,80,93,159,92,1293,	0,19178,47579,51394,52393,58722,61180,62539,64256,64532,79590,81335,82067,
#Partially deleted in new
chr2	227472371	227554545	chr2:227472371-227554545	1	+	227472421	227554495	0	12	217,94,116,163,154,210,181,80,93,159,92,110,	0,19175,47576,51391,52390,61177,62473,64253,64529,79587,81332,82064,
#Partially deleted in new
chr2	227472371	227554545	chr2:227472371-227554545	1	+	227472421	227554495	0	13	217,94,116,163,154,120,210,181,80,93,159,86,110,	0,19175,47576,51391,52390,58719,61177,62473,64253,64529,79587,81338,82064,
#Partially deleted in new
chr2	227508271	227533681	chr2:227508271-227533681	0	+	227508623	227533681	789624	6	379,116,163,154,120,133,	0,11676,15491,16490,22819,25277,
#Partially deleted in new
chr2	227510720	227524904	chr2:227510720-227524904	0	+	227510720	227510720	8553170	4	144,116,163,143,	0,9227,13042,14041,
#Partially deleted in new
chr2	227536954	227554912	chr2:227536954-227554912	0	+	227536954	227554495	789624	5	39,48,159,92,477,	0,13104,15004,16749,17481,
#Deleted in new
chr2	227587236	227587515	chr2:227587236-227587515	3	-	227587236	227587515	8553170	1	279,	0,
#Deleted in new
chr2	227598892	227599255	chr2:227598892-227599255	3	+	227598892	227599255	789624	1	363,	0,
#Partially deleted in new
chr2	227608783	227609101	chr2:227608783-227609101	3	+	227608783	227609101	789624	1	318,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	227610089	227633172	chr2:227610089-227633172	0	-	227610089	227610089	8553170	3	1567,73,204,	0,18349,22879,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	227610090	227633320	chr2:227610090-227633320	0	-	227610090	227610090	8553170	4	1566,95,73,352,	0,2849,18348,22878,
#Deleted in new
chr2	227614537	227614840	chr2:227614537-227614840	3	-	227614537	227614840	789624	1	303,	0,
#Deleted in new
chr2	227616997	227617790	chr2:227616997-227617790	3	-	227616997	227616997	8553170	2	227,313,	0,480,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	227616997	227618655	chr2:227616997-227618655	3	+	227617497	227617815	789624	1	1658,	0,
#Partially deleted in new
chr2	227630291	227642365	chr2:227630291-227642365	0	-	227630291	227630291	8553170	3	313,142,143,	0,2677,11931,
#Partially deleted in new
chr2	227632968	227648606	chr2:227632968-227648606	4	-	227632968	227632968	16724991	4	142,193,38,766,	0,9115,14451,14872,
#Deleted in new
chr2	227666803	227667061	chr2:227666803-227667061	3	+	227666803	227667061	789624	1	258,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	227683762	227718031	chr2:227683762-227718031	3	-	227687396	227702318	789624	6	3811,142,193,829,152,89,	0,4403,12126,14973,18406,34180,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	227685209	227702320	chr2:227685209-227702320	0	-	227696048	227702318	789624	4	2364,142,193,152,	0,2956,10679,16959,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	227685854	227718010	chr2:227685854-227718010	1	-	227686149	227702318	789624	4	315,109,152,68,	0,13601,16314,32088,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	227685870	227714612	chr2:227685870-227714612	1	-	227687396	227702318	789624	6	1703,142,193,829,152,164,	0,2295,10018,12865,16298,28578,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	227685957	227718001	chr2:227685957-227718001	0	-	227695884	227699399	789624	5	1616,142,563,829,59,	0,2208,9561,12778,31985,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	227686483	227718001	chr2:227686483-227718001	0	-	227701087	227702318	789624	8	1090,142,193,829,196,152,100,59,	0,1682,9405,12252,14429,15685,16108,31459,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	227686551	227718001	chr2:227686551-227718001	0	-	227701087	227702318	789624	7	1022,142,193,829,196,152,59,	0,1614,9337,12184,14361,15617,31391,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	227686834	227706656	chr2:227686834-227706656	1	-	227687396	227706348	789624	6	739,142,193,829,152,342,	0,1331,9054,11901,15334,19480,
#Partially deleted in new
chr2	227687434	227701252	chr2:227687434-227701252	0	-	227687434	227687434	8553170	5	139,142,193,829,340,	0,731,8454,11301,13478,
#Partially deleted in new
chr2	227687512	227702320	chr2:227687512-227702320	0	-	227698825	227702318	789624	5	61,142,193,111,152,	0,653,8376,11223,14656,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	227699521	227702977	chr2:227699521-227702977	0	-	227699521	227702318	789624	2	43,809,	0,2647,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	227699552	227718001	chr2:227699552-227718001	0	-	227699552	227702318	789624	3	12,523,59,	0,2616,18390,
#Partially deleted in new
chr2	227701606	227717999	chr2:227701606-227717999	0	-	227701606	227701606	8553170	2	714,57,	0,16336,
#Deleted in new
chr2	227724439	227724757	chr2:227724439-227724757	3	-	227724439	227724757	789624	1	318,	0,
#Deleted in new
chr2	227728334	227728625	chr2:227728334-227728625	3	+	227728334	227728625	789624	1	291,	0,
#Partially deleted in new
chr2	227745844	227746681	chr2:227745844-227746681	3	+	227745893	227746220	789624	1	837,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	227763051	227763152	chr2:227763051-227763152	7	-	227763051	227763051	16724991	1	101,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	227778509	227778735	chr2:227778509-227778735	7	-	227778509	227778509	16724991	1	226,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	227801839	227804705	chr2:227801839-227804705	7	+	227801839	227801839	16724991	1	2866,	0,
#Partially deleted in new
chr2	227813841	227817564	chr2:227813841-227817564	3	+	227813911	227817083	0	4	146,112,78,503,	0,1615,2465,3220,
#Partially deleted in new
chr2	227813842	227815984	chr2:227813842-227815984	0	+	227813842	227813842	8553170	2	145,528,	0,1614,
#Partially deleted in new
chr2	227813853	227817534	chr2:227813853-227817534	1	+	227813911	227817083	0	4	134,115,78,473,	0,1600,2453,3208,
#Deleted in new
chr2	227815368	227817463	chr2:227815368-227817463	0	+	227815368	227815368	8553170	3	200,78,402,	0,938,1693,
#Deleted in new
chr2	227870082	227870644	chr2:227870082-227870644	7	-	227870082	227870082	16724991	1	562,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	227871053	227924344	chr2:227871053-227924344	0	+	227871689	227912390	789624	14	676,73,145,59,123,100,108,107,103,115,216,77,163,411,	0,14297,18802,20201,22741,27128,31948,33875,35182,36084,41200,47726,50345,52880,
#Partially deleted in new
chr2	227871606	227924341	chr2:227871606-227924341	3	+	227871689	227923968	0	13	123,73,145,59,123,100,108,107,103,115,77,163,408,	0,13744,18249,19648,22188,26575,31395,33322,34629,35531,47173,49792,52327,
#Partially deleted in new
chr2	227871634	227890000	chr2:227871634-227890000	0	+	227885355	227890000	789624	4	95,251,73,145,	0,514,13716,18221,
#Partially deleted in new
chr2	227871641	227903086	chr2:227871641-227903086	0	+	227871689	227885369	789624	8	88,52,73,145,59,123,100,85,	0,4801,13709,18214,19613,22153,26540,31360,
#Deleted in new
chr2	227887630	227887744	chr2:227887630-227887744	3	+	227887630	227887630	8553170	1	114,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	227889512	227895591	chr2:227889512-227895591	0	+	227889512	227889512	8553170	5	61,145,59,123,93,	0,343,1742,4282,5986,
#Partially deleted in new
chr2	227979949	228181645	chr2:227979949-228181645	1	-	227981716	228181598	789624	12	1911,185,53,87,186,3751,256,135,60,108,106,79,	0,11050,11324,13584,15559,36456,41761,45444,47534,128882,152030,201617,
#Partially deleted in new
chr2	227979956	228181626	chr2:227979956-228181626	3	-	227981716	228181598	789624	11	1904,185,53,186,3751,256,135,60,108,106,60,	0,11043,11317,15552,36449,41754,45437,47527,128875,152023,201610,
#Deleted in new
chr2	227990907	227995635	chr2:227990907-227995635	0	-	227990907	227990907	8553170	4	277,53,87,127,	0,366,2626,4601,
#Partially deleted in new
chr2	228169742	228169849	chr2:228169742-228169849	3	+	228169742	228169742	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	228352119	228353215	chr2:228352119-228353215	7	-	228352119	228352119	16724991	1	1096,	0,
#Partially deleted in new
chr2	228483260	228611395	chr2:228483260-228611395	3	-	228483260	228483260	789624	4	238,111,183,144,	0,5422,23066,127991,
#Deleted in new
chr2	228683536	228684580	chr2:228683536-228684580	3	-	228683536	228683536	8553170	2	131,296,	0,748,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	228753323	228753786	chr2:228753323-228753786	7	+	228753323	228753323	16724991	1	463,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	228850525	229245060	chr2:228850525-229245060	0	-	228850525	228850525	8553170	3	123,147,209,	0,305292,394326,
#Deleted in new
chr2	229003885	229004400	chr2:229003885-229004400	7	+	229003885	229003885	16724991	1	515,	0,
#Partially deleted in new
chr2	229023988	229271280	chr2:229023988-229271280	3	-	229025631	229271043	789624	2	2120,267,	0,247025,
#Partially deleted in new
chr2	229023994	229271285	chr2:229023994-229271285	1	-	229025631	229271043	789624	3	2114,147,272,	0,131823,247019,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	229025576	229232085	chr2:229025576-229232085	1	-	229025631	229232054	789624	3	532,147,160,	0,130241,206349,
#Partially deleted in new
chr2	229026035	229271239	chr2:229026035-229271239	0	-	229227967	229271043	789624	4	73,147,107,226,	0,129782,201921,244978,
#Deleted in new
chr2	229236339	229236609	chr2:229236339-229236609	3	-	229236339	229236339	8553170	1	270,	0,
#Partially deleted in new
chr2	229357628	229714558	chr2:229357628-229714558	3	-	229358539	229714423	789624	13	1023,247,132,114,123,225,114,154,146,167,95,309,411,	0,9244,30636,49603,60479,89687,119511,155154,189318,228229,230765,233951,356519,
#Partially deleted in new
chr2	229580153	229587177	chr2:229580153-229587177	0	-	229580153	229580153	8553170	3	191,167,484,	0,5704,6540,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	229606237	229606299	chr2:229606237-229606299	3	+	229606237	229606237	8553170	1	62,	0,
#Deleted in new
chr2	229701793	229702148	chr2:229701793-229702148	7	+	229701793	229701793	16724991	1	355,	0,
#Partially deleted in new
chr2	229763837	229922009	chr2:229763837-229922009	1	-	229767553	229880079	789624	41	3913,104,95,114,165,165,155,115,99,157,143,152,128,200,74,173,152,192,142,175,101,208,119,229,73,157,118,166,69,162,93,96,36,149,96,66,137,106,803,147,130,	0,4778,5393,7681,10259,13477,14595,15038,21919,23667,24960,25773,27286,28028,28315,29135,31341,32753,33852,35037,35445,38414,39733,40161,41892,43870,44414,47042,47298,50032,50395,51261,51435,54526,65355,66918,73010,76984,94934,116144,158042,
#Partially deleted in new
chr2	229767440	229921999	chr2:229767440-229921999	3	-	229767553	229880079	789624	42	310,104,95,114,165,165,155,115,99,157,143,152,128,200,74,173,152,192,142,175,101,208,119,229,73,157,118,166,69,162,93,96,36,149,96,84,137,106,803,126,147,120,	0,1175,1790,4078,6656,9874,10992,11435,18316,20064,21357,22170,23683,24425,24712,25532,27738,29150,30249,31434,31842,34811,36130,36558,38289,40267,40811,43439,43695,46429,46792,47658,47832,50923,61752,63315,69407,73381,91331,92965,112541,154439,
#Partially deleted in new
chr2	229767440	229921903	chr2:229767440-229921903	1	-	229767553	229880079	789624	39	310,104,95,114,165,165,155,115,99,157,143,152,128,200,74,173,152,192,142,175,101,208,119,229,154,157,118,166,69,162,93,96,36,149,96,84,137,147,24,	0,1175,1790,4078,6656,9874,10992,11435,18316,20064,21357,22170,23683,24425,24712,25532,27738,29150,30249,31434,31842,34811,36130,36558,38289,40267,40811,43439,43695,46429,46792,47658,47832,50923,61752,63315,69407,112541,154439,
#Partially deleted in new
chr2	229768615	229778465	chr2:229768615-229778465	0	-	229768615	229778465	789624	5	104,95,165,165,33,	0,615,5481,8699,9817,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	229773560	229778575	chr2:229773560-229778575	0	-	229773560	229773560	8553170	3	701,165,143,	0,3754,4872,
#Partially deleted in new
chr2	229791787	229793107	chr2:229791787-229793107	0	-	229791787	229791787	8553170	3	278,74,135,	0,365,1185,
#Partially deleted in new
chr2	229791973	229793368	chr2:229791973-229793368	0	-	229791973	229791973	8553170	3	92,74,396,	0,179,999,
#Partially deleted in new
chr2	229794860	229796732	chr2:229794860-229796732	0	-	229794860	229794860	8553170	2	470,142,	0,1730,
#Partially deleted in new
chr2	229802250	229806149	chr2:229802250-229806149	0	-	229802250	229802250	8553170	4	209,119,229,420,	0,1320,1748,3479,
#Partially deleted in new
chr2	229807318	229922009	chr2:229807318-229922009	0	-	229807318	229807318	8553170	16	546,118,166,69,162,93,96,36,149,96,84,137,106,803,147,130,	0,933,3561,3817,6551,6914,7780,7954,11045,21874,23437,29529,33503,51453,72663,114561,
#Partially deleted in new
chr2	229810956	229814493	chr2:229810956-229814493	0	-	229810956	229810956	8553170	4	89,69,162,261,	0,179,2913,3276,
#Partially deleted in new
chr2	229831031	229921952	chr2:229831031-229921952	1	-	229831123	229880079	789624	7	115,137,106,803,126,147,73,	0,5816,9790,27740,29374,48950,90848,
#Partially deleted in new
chr2	229836862	229859282	chr2:229836862-229859282	0	-	229836862	229859282	789624	4	122,106,60,364,	0,3959,21909,22056,
#Partially deleted in new
chr2	229859210	229923239	chr2:229859210-229923239	0	-	229859210	229880079	789624	3	364,147,92,	0,20771,63937,
#Partially deleted in new
chr2	229859225	229921358	chr2:229859225-229921358	0	-	229859225	229880079	789624	3	349,147,88,	0,20756,62045,
#Partially deleted in new
chr2	229859227	229921662	chr2:229859227-229921662	0	-	229859227	229880079	789624	4	347,126,147,99,	0,1178,20754,62336,
#Deleted in new
chr2	229894345	229894453	chr2:229894345-229894453	3	+	229894345	229894345	8553170	1	108,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	229922301	230013109	chr2:229922301-230013109	1	+	229932883	230010884	789624	5	308,116,109,173,2414,	0,10469,53939,74449,88394,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	229922490	229977174	chr2:229922490-229977174	0	+	229922490	229922490	8553170	2	119,934,	0,53750,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	229922495	230013109	chr2:229922495-230013109	3	+	229922513	230010884	789624	4	114,109,173,2414,	0,53745,74255,88200,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	229922505	230012280	chr2:229922505-230012280	1	+	229922513	230010884	789624	4	104,109,113,1585,	0,53735,74305,88190,
#Partially deleted in new
chr2	229942727	229945137	chr2:229942727-229945137	3	+	229942727	229942727	8553170	2	534,48,	0,2362,
#Partially deleted in new
chr2	230034973	230068999	chr2:230034973-230068999	3	-	230037379	230059352	789624	5	2558,978,144,273,445,	0,10771,14787,24120,33581,
#Partially deleted in new
chr2	230045656	230068907	chr2:230045656-230068907	0	-	230045656	230059352	789624	4	1066,144,273,353,	0,4104,13437,22898,
#Partially deleted in new
chr2	230045669	230068548	chr2:230045669-230068548	0	-	230045669	230059352	789624	5	1053,144,273,139,63,	0,4091,13424,21429,22816,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	230058228	230058324	chr2:230058228-230058324	3	-	230058228	230058228	8553170	1	96,	0,
#Partially deleted in new
chr2	230059226	230068289	chr2:230059226-230068289	0	-	230059226	230059352	789624	3	140,139,258,	0,7872,8805,
#Partially deleted in new
chr2	230059298	230068993	chr2:230059298-230068993	0	-	230059298	230059352	789624	3	68,139,439,	0,7800,9256,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	230125030	230174106	chr2:230125030-230174106	0	+	230125030	230125030	8553170	3	519,95,419,	0,47068,48657,
#Partially deleted in new
chr2	230138600	230138783	chr2:230138600-230138783	7	+	230138600	230138600	16724991	1	183,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	230167292	230173514	chr2:230167292-230173514	0	-	230167292	230167292	8553170	3	1945,109,671,	0,4773,5551,
#Partially deleted in new
chr2	230168917	230219950	chr2:230168917-230219950	3	-	230169123	230216927	789624	19	320,141,72,109,116,143,99,69,150,81,150,69,78,84,84,267,169,148,77,	0,1703,2778,3148,3926,8620,9239,14654,17076,31967,33661,39073,41013,42552,43429,43843,46032,47863,50956,
#Partially deleted in new
chr2	230168917	230171616	chr2:230168917-230171616	0	-	230168917	230168917	8553170	3	320,141,138,	0,1703,2561,
#Partially deleted in new
chr2	230168931	230172312	chr2:230168931-230172312	0	-	230168931	230168931	8553170	2	306,247,	0,3134,
#Partially deleted in new
chr2	230168935	230219951	chr2:230168935-230219951	1	-	230169123	230216927	789624	18	302,141,109,116,143,99,69,150,81,150,69,78,84,84,267,169,148,78,	0,1685,3130,3908,8602,9221,14636,17058,31949,33643,39055,40995,42534,43411,43825,46014,47845,50938,
#Partially deleted in new
chr2	230169127	230170915	chr2:230169127-230170915	0	-	230169127	230169127	8553170	2	110,295,	0,1493,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	230172122	230173561	chr2:230172122-230173561	0	+	230172122	230172122	8553170	2	71,702,	0,737,
#Partially deleted in new
chr2	230176472	230219973	chr2:230176472-230219973	1	-	230176664	230216927	789624	15	252,143,99,69,150,81,144,69,78,84,84,267,169,148,100,	0,1065,1684,7099,9521,24412,26106,31518,33458,34997,35874,36288,38477,40308,43401,
#Partially deleted in new
chr2	230176474	230220112	chr2:230176474-230220112	1	-	230176664	230216927	789624	15	250,143,99,69,150,81,150,69,78,84,84,267,169,148,239,	0,1063,1682,7097,9519,24410,26104,31516,33456,34995,35872,36286,38475,40306,43399,
#Partially deleted in new
chr2	230176558	230225729	chr2:230176558-230225729	1	-	230176664	230221721	789624	16	166,143,99,69,150,81,150,69,78,84,84,267,169,148,80,195,	0,979,1598,7013,9435,24326,26020,31432,33372,34911,35788,36202,38391,40222,45146,48976,
#Partially deleted in new
chr2	230177365	230178257	chr2:230177365-230178257	0	-	230177365	230177365	8553170	2	315,101,	0,791,
#Partially deleted in new
chr2	230200467	230211547	chr2:230200467-230211547	0	-	230200467	230200467	8553170	5	498,150,69,78,78,	0,2111,7523,9463,11002,
#Partially deleted in new
chr2	230202932	230212905	chr2:230202932-230212905	0	-	230202932	230202932	8553170	6	431,69,78,84,84,145,	0,5058,6998,8537,9414,9828,
#Partially deleted in new
chr2	230203109	230234966	chr2:230203109-230234966	0	+	230225844	230234966	789624	5	170,116,116,149,29,	0,10544,10849,22645,31828,
#Partially deleted in new
chr2	230203623	230214159	chr2:230203623-230214159	0	+	230203623	230203623	8553170	3	70,116,201,	0,10030,10335,
#Partially deleted in new
chr2	230212348	230219902	chr2:230212348-230219902	0	-	230212348	230216927	789624	6	82,267,169,148,118,29,	0,412,2601,4432,7207,7525,
#Partially deleted in new
chr2	230212395	230219961	chr2:230212395-230219961	0	-	230212395	230216789	789624	5	35,267,169,41,88,	0,365,2554,4385,7478,
#Partially deleted in new
chr2	230212415	230219989	chr2:230212415-230219989	0	-	230212415	230212415	8553170	4	15,267,169,116,	0,345,2534,7458,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr2	230225729	230313215	chr2:230225729-230313215	1	+	230225844	230312684	0	26	174,178,169,84,81,93,78,150,84,81,102,87,117,54,66,81,75,105,143,48,42,116,109,78,144,630,	0,11353,12483,15674,18001,19258,20133,22186,23155,25251,27586,43802,44107,44856,58616,60022,62162,64730,66916,68541,71691,84194,85013,85424,85722,86856,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr2	230225730	230313212	chr2:230225730-230313212	3	+	230225844	230312684	0	27	173,178,169,84,81,93,78,150,84,81,102,81,87,117,54,66,81,75,105,143,48,42,116,109,78,144,627,	0,11352,12482,15673,18000,19257,20132,22185,23154,25250,27585,29721,43801,44106,44855,58615,60021,62161,64729,66915,68540,71690,84193,85012,85423,85721,86855,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr2	230225741	230313214	chr2:230225741-230313214	1	+	230225844	230312684	0	24	162,178,169,84,81,84,78,84,81,87,117,54,66,81,75,105,143,48,42,116,109,78,144,629,	0,11341,12471,15662,17989,19246,20121,23143,29710,43790,44095,44844,58604,60010,62150,64718,66904,68529,71679,84182,85001,85412,85710,86844,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr2	230225744	230313070	chr2:230225744-230313070	1	+	230225844	230312684	0	25	159,178,169,84,81,93,150,84,81,81,87,117,54,66,81,75,105,143,48,42,116,109,78,144,485,	0,11338,12468,15659,17986,19243,22171,23140,25236,29707,43787,44092,44841,58601,60007,62147,64715,66901,68526,71676,84179,84998,85409,85707,86841,
#Partially deleted in new
chr2	230225748	230238519	chr2:230225748-230238519	0	+	230225748	230225748	8553170	3	155,178,307,	0,11334,12464,
#Partially deleted in new
chr2	230225763	230239087	chr2:230225763-230239087	1	+	230225844	230238873	0	4	140,178,169,327,	0,11319,12449,12997,
#Partially deleted in new
chr2	230225791	230237614	chr2:230225791-230237614	0	+	230225791	230225791	8553170	2	112,532,	0,11291,
#Partially deleted in new
chr2	230269897	230288097	chr2:230269897-230288097	0	+	230269897	230269897	8553170	5	56,54,66,81,206,	0,688,14448,15854,17994,
#Partially deleted in new
chr2	230294288	230310388	chr2:230294288-230310388	0	+	230294288	230294288	8553170	3	30,42,465,	0,3132,15635,
#Partially deleted in new
chr2	230310140	230311523	chr2:230310140-230311523	0	+	230310140	230310140	8553170	3	71,109,370,	0,602,1013,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr2	230327183	230403732	chr2:230327183-230403732	3	+	230327269	230402896	789624	19	118,75,163,169,84,60,54,66,81,75,105,143,48,42,116,109,78,144,935,	0,1573,30621,31780,34430,43724,44414,56326,58040,61375,62735,64903,66230,69573,72943,73771,74182,74480,75614,
#Partially deleted in new
chr2	230327183	230400624	chr2:230327183-230400624	1	+	230327269	230400246	789624	15	118,75,163,169,84,60,54,66,81,75,105,143,48,42,498,	0,1573,30621,31780,34430,43724,44414,56326,58040,61375,62735,64903,66230,69573,72943,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr2	230327269	230403730	chr2:230327269-230403730	1	+	230327269	230402896	789624	18	32,163,169,84,60,54,66,81,75,105,143,48,42,116,109,78,144,933,	0,30535,31694,34344,43638,44328,56240,57954,61289,62649,64817,66144,69487,72857,73685,74096,74394,75528,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	230327269	230403730	chr2:230327269-230403730	1	+	230327269	230402896	789624	17	32,163,169,84,60,54,66,81,75,143,48,42,116,109,78,144,933,	0,30535,31694,34344,43638,44328,56240,57954,61289,64817,66144,69487,72857,73685,74096,74394,75528,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	230342069	230372744	chr2:230342069-230372744	1	+	230357958	230371665	789624	6	104,163,169,84,60,1147,	0,15735,16894,19544,28838,29528,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	230370905	230403730	chr2:230370905-230403730	0	+	230370905	230370905	8553170	12	62,54,66,81,75,105,143,48,42,1317,144,933,	0,692,12604,14318,17653,19013,21181,22508,25851,29221,30758,31892,
#Deleted in new
chr2	230385240	230388786	chr2:230385240-230388786	0	+	230385240	230385240	8553170	2	64,228,	0,3318,
#Partially deleted in new
chr2	230391714	230401053	chr2:230391714-230401053	0	+	230391714	230391714	8553170	7	93,143,48,42,116,80,99,	0,372,1699,5042,8412,8619,9240,
#Deleted in new
chr2	230399820	230400477	chr2:230399820-230400477	0	+	230399820	230399820	8553170	2	422,144,	0,513,
#Deleted in new
chr2	230401130	230402888	chr2:230401130-230402888	0	+	230401130	230401130	8553170	2	677,91,	0,1667,
#Deleted in new
chr2	230410699	230412529	chr2:230410699-230412529	3	-	230410699	230410699	8553170	1	1830,	0,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr2	230415941	230516527	chr2:230415941-230516527	1	+	230416296	230515640	0	25	387,75,163,169,84,63,150,84,153,84,84,54,96,54,84,117,54,45,75,45,105,143,39,42,1433,	0,1649,26995,28236,30877,33146,33619,34230,45320,46493,48125,50359,51178,53101,54073,57382,58452,78474,82519,87124,88244,90361,92051,95183,99153,
#Partially deleted in new
chr2	230416155	230470534	chr2:230416155-230470534	1	+	230416296	230470112	0	14	173,163,169,84,63,150,84,153,84,84,54,87,54,520,	0,26781,28022,30663,32932,33405,34016,45106,46279,47911,50145,50964,52887,53859,
#Partially deleted in new
chr2	230416220	230449380	chr2:230416220-230449380	0	+	230416296	230449380	789624	6	108,163,169,84,63,67,	0,26716,27957,30598,32867,33093,
#Partially deleted in new
chr2	230416239	230470489	chr2:230416239-230470489	1	+	230416296	230470112	789624	14	89,163,169,84,63,150,84,153,84,84,54,96,54,475,	0,26697,27938,30579,32848,33321,33932,45022,46195,47827,50061,50880,52803,53775,
#Partially deleted in new
chr2	230416246	230470517	chr2:230416246-230470517	1	+	230416296	230470112	0	15	82,75,163,169,84,63,150,84,153,84,84,54,96,54,503,	0,1344,26690,27931,30572,32841,33314,33925,45015,46188,47820,50054,50873,52796,53768,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr2	230416265	230543183	chr2:230416265-230543183	3	+	230416296	230542946	0	29	63,75,163,169,84,63,150,84,153,84,84,54,96,54,84,117,54,45,75,45,105,143,39,42,116,121,72,144,348,	0,1325,26671,27912,30553,32822,33295,33906,44996,46169,47801,50035,50854,52777,53749,57058,58128,78150,82195,86800,87920,90037,91727,94859,123001,124610,125035,125626,126570,
#Partially deleted in new
chr2	230416265	230508146	chr2:230416265-230508146	1	+	230416296	230508046	0	23	63,75,163,169,84,63,150,84,153,84,84,54,96,54,84,117,54,45,75,45,105,143,154,	0,1325,26671,27912,30553,32822,33295,33906,44996,46169,47801,50035,50854,52777,53749,57058,58128,78150,82195,86800,87920,90037,91727,
#Partially deleted in new
chr2	230416755	230470530	chr2:230416755-230470530	1	+	230440555	230470112	0	16	126,75,82,163,169,84,63,150,84,153,84,84,54,96,54,516,	0,835,23720,26181,27422,30063,32332,32805,33416,44506,45679,47311,49545,50364,52287,53259,
#Partially deleted in new
chr2	230449374	230461328	chr2:230449374-230461328	0	+	230449374	230449374	8553170	3	336,84,67,	0,797,11887,
#Partially deleted in new
chr2	230449568	230462629	chr2:230449568-230462629	0	+	230449568	230449568	8553170	4	142,84,153,195,	0,603,11693,12866,
#Partially deleted in new
chr2	230462434	230470103	chr2:230462434-230470103	0	+	230462434	230470103	789624	5	84,54,96,54,89,	0,3866,4685,6608,7580,
#Partially deleted in new
chr2	230462466	230494460	chr2:230462466-230494460	0	+	230462466	230494460	789624	9	52,84,54,96,54,84,57,54,45,	0,1600,3834,4653,6576,7548,10917,11927,31949,
#Partially deleted in new
chr2	230463617	230467147	chr2:230463617-230467147	0	+	230463617	230463617	8553170	3	533,54,28,	0,2683,3502,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	230468831	230470360	chr2:230468831-230470360	0	+	230468831	230468831	8553170	2	265,346,	0,1183,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	230473116	230498522	chr2:230473116-230498522	0	+	230473116	230473116	8553170	5	324,54,120,45,62,	0,1277,20675,21299,25344,
#Partially deleted in new
chr2	230504216	230506766	chr2:230504216-230506766	0	+	230504216	230504216	8553170	2	74,464,	0,2086,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	230504261	230544090	chr2:230504261-230544090	0	+	230504261	230542946	789624	8	29,143,42,116,121,72,144,1255,	0,2041,6863,35005,36614,37039,37630,38574,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	230507100	230507386	chr2:230507100-230507386	3	+	230507100	230507100	8553170	1	286,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	230508145	230543122	chr2:230508145-230543122	0	+	230508145	230508145	8553170	6	3021,116,121,72,144,287,	0,31121,32730,33155,33746,34690,
#Partially deleted in new
chr2	230515022	230515638	chr2:230515022-230515638	7	+	230515022	230515022	16724991	1	616,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	230537641	230544090	chr2:230537641-230544090	0	+	230537641	230537641	8553170	5	1741,121,72,144,1255,	0,3234,3659,4250,5194,
#Partially deleted in new
chr2	230538287	230579933	chr2:230538287-230579933	0	-	230538287	230538287	8553170	6	117,54,105,70,84,33,	0,12760,37634,39839,40866,41613,
#Partially deleted in new
chr2	230573166	230573809	chr2:230573166-230573809	7	-	230573166	230573166	16724991	1	643,	0,
#Partially deleted in new
chr2	230584814	230586715	chr2:230584814-230586715	7	-	230584814	230584814	16724991	2	159,156,	0,1745,
#Deleted in new
chr2	230587120	230587227	chr2:230587120-230587227	3	+	230587120	230587120	8553170	1	107,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	230690920	230700529	chr2:230690920-230700529	3	-	230690920	230690920	789624	4	1313,696,393,207,	0,3630,5382,9402,
#Partially deleted in new
chr2	230712844	230821075	chr2:230712844-230821075	3	+	230760001	230818704	0	9	386,157,165,119,169,60,66,144,2560,	0,47114,78027,80368,85884,97418,101204,104909,105671,
#Partially deleted in new
chr2	230713547	230818750	chr2:230713547-230818750	1	+	230760001	230818704	0	9	511,157,165,119,169,60,66,144,235,	0,46411,77324,79665,85181,96715,100501,104206,104968,
#Partially deleted in new
chr2	230713547	230818704	chr2:230713547-230818704	1	+	230760001	230818704	0	9	255,157,165,119,169,60,66,144,189,	0,46411,77324,79665,85181,96715,100501,104206,104968,
#Deleted in new
chr2	230725142	230725403	chr2:230725142-230725403	7	-	230725142	230725142	16724991	1	261,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	230752140	230752247	chr2:230752140-230752247	3	+	230752140	230752140	8553170	1	107,	0,
#Partially deleted in new
chr2	230759997	230819299	chr2:230759997-230819299	1	+	230760001	230818704	789624	9	118,165,119,169,42,15,63,144,784,	0,30874,33215,38731,50265,54034,54054,57756,58518,
#Partially deleted in new
chr2	230779005	230790978	chr2:230779005-230790978	0	+	230779005	230779005	8553170	2	445,107,	0,11866,
#Partially deleted in new
chr2	230790897	230799124	chr2:230790897-230799124	0	+	230790897	230790897	8553170	3	139,119,396,	0,2315,7831,
#Partially deleted in new
chr2	230813982	230818182	chr2:230813982-230818182	0	+	230813982	230813982	8553170	2	132,429,	0,3771,
#Deleted in new
chr2	230836908	230837385	chr2:230836908-230837385	7	+	230836908	230836908	16724991	1	477,	0,
#Partially deleted in new
chr2	230864638	230876947	chr2:230864638-230876947	0	+	230865025	230876947	789624	5	146,196,141,189,91,	0,311,8778,10981,12218,
#Partially deleted in new
chr2	230864653	230876967	chr2:230864653-230876967	0	+	230873482	230876967	789624	4	131,141,189,111,	0,8763,10966,12203,
#Partially deleted in new
chr2	230864899	230879247	chr2:230864899-230879247	3	+	230865025	230878099	789624	6	246,141,189,111,151,1240,	0,8517,10720,11957,12500,13108,
#Partially deleted in new
chr2	230864947	230879247	chr2:230864947-230879247	1	+	230865025	230878099	789624	5	198,189,111,151,1240,	0,10672,11909,12452,13060,
#Partially deleted in new
chr2	230864979	230879248	chr2:230864979-230879248	1	+	230865025	230878099	789624	5	166,141,189,151,1241,	0,8437,10640,12420,13028,
#Partially deleted in new
chr2	230865247	230876960	chr2:230865247-230876960	0	+	230873482	230876960	789624	4	139,141,189,104,	0,8169,10372,11609,
#Partially deleted in new
chr2	230865267	230878385	chr2:230865267-230878385	1	+	230873482	230878099	789624	6	136,141,189,111,151,378,	0,8149,10352,11589,12132,12740,
#Partially deleted in new
chr2	230865663	230876967	chr2:230865663-230876967	0	+	230873482	230876967	789624	4	122,141,189,111,	0,7753,9956,11193,
#Partially deleted in new
chr2	230873230	230876967	chr2:230873230-230876967	0	+	230873230	230873230	8553170	4	108,141,189,111,	0,186,2389,3626,
#Deleted in new
chr2	230878217	230878718	chr2:230878217-230878718	1	+	230878217	230878718	789624	1	501,	0,
#Partially deleted in new
chr2	230886499	230895468	chr2:230886499-230895468	0	+	230886499	230886499	8553170	2	470,87,	0,8882,
#Partially deleted in new
chr2	230886505	230894074	chr2:230886505-230894074	0	+	230886505	230886505	8553170	2	464,80,	0,7489,
#Partially deleted in new
chr2	230886545	230897091	chr2:230886545-230897091	3	+	230886545	230886545	789624	3	424,208,1133,	0,8852,9413,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	230886814	230887738	chr2:230886814-230887738	0	+	230886814	230886814	8553170	2	155,358,	0,566,
#Partially deleted in new
chr2	230907317	230925226	chr2:230907317-230925226	0	-	230910002	230910962	789624	3	993,1475,59,	0,2304,17850,
#Partially deleted in new
chr2	230907318	230925226	chr2:230907318-230925226	1	-	230910002	230910962	789624	3	992,1475,59,	0,2303,17849,
#Partially deleted in new
chr2	230907327	230925226	chr2:230907327-230925226	1	-	230910002	230910962	789624	2	3769,59,	0,17840,
#Deleted in new
chr2	230908851	230910102	chr2:230908851-230910102	3	+	230908851	230908851	8553170	2	148,452,	0,799,
#Partially deleted in new
chr2	230909865	230961066	chr2:230909865-230961066	3	-	230910002	230910962	789624	2	1231,292,	0,50909,
#Partially deleted in new
chr2	230910236	230925226	chr2:230910236-230925226	0	-	230910236	230910962	789624	2	860,59,	0,14931,
#Partially deleted in new
chr2	230924566	230929919	chr2:230924566-230929919	3	+	230924566	230924566	8553170	3	87,80,337,	0,3939,5016,
#Deleted in new
chr2	230957592	230957950	chr2:230957592-230957950	7	+	230957592	230957592	16724991	1	358,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	230984367	230996031	chr2:230984367-230996031	3	-	230984367	230984367	789624	6	1743,1196,207,69,109,184,	0,2616,7401,7966,10909,11480,
#Partially deleted in new
chr2	230987641	230996032	chr2:230987641-230996032	0	-	230987641	230987641	8553170	4	538,268,109,185,	0,4127,7635,8206,
#Partially deleted in new
chr2	230987792	230996008	chr2:230987792-230996008	0	-	230987792	230987792	8553170	3	387,109,281,	0,7484,7935,
#Partially deleted in new
chr2	230987978	230996012	chr2:230987978-230996012	0	-	230987978	230987978	8553170	3	201,109,165,	0,7298,7869,
#Partially deleted in new
chr2	230988044	230996032	chr2:230988044-230996032	0	-	230988044	230988044	8553170	5	135,268,69,109,185,	0,3724,4289,7232,7803,
#Partially deleted in new
chr2	230988127	230995881	chr2:230988127-230995881	0	-	230988127	230988127	8553170	4	52,271,109,34,	0,3641,7149,7720,
#Partially deleted in new
chr2	230988170	230996029	chr2:230988170-230996029	0	-	230988170	230988170	8553170	4	9,207,109,182,	0,3598,7106,7677,
#Partially deleted in new
chr2	230990323	231002789	chr2:230990323-231002789	1	+	230990323	231002789	789624	3	790,172,106,	0,10042,12360,
#Partially deleted in new
chr2	230996120	231007284	chr2:230996120-231007284	1	+	230996233	231002789	789624	6	414,172,144,80,138,63,	0,4245,6563,7918,10577,11101,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	230996125	231025055	chr2:230996125-231025055	3	+	230996233	231002789	789624	9	409,172,144,80,108,339,168,121,77,	0,4240,6558,7913,16464,17748,23594,25487,28853,
#Partially deleted in new
chr2	230996137	231007284	chr2:230996137-231007284	1	+	230996233	231002789	789624	5	397,172,144,80,63,	0,4228,6546,7901,11084,
#Partially deleted in new
chr2	230996153	231007263	chr2:230996153-231007263	1	+	230996233	231002789	789624	6	169,179,172,144,80,42,	0,202,4212,6530,7885,11068,
#Partially deleted in new
chr2	230996169	231002756	chr2:230996169-231002756	0	+	230996233	231000456	789624	3	87,172,73,	0,4196,6514,
#Partially deleted in new
chr2	230996233	231025019	chr2:230996233-231025019	1	+	230996233	231002789	789624	5	301,172,144,108,41,	0,4132,6450,16356,28745,
#Partially deleted in new
chr2	230996335	231007284	chr2:230996335-231007284	0	+	230996335	231002799	789624	3	199,144,63,	0,6348,10886,
#Partially deleted in new
chr2	230996388	231007284	chr2:230996388-231007284	0	+	230996388	231002799	789624	4	146,144,80,63,	0,6295,7650,10833,
#Partially deleted in new
chr2	230999568	231007271	chr2:230999568-231007271	0	+	230999568	230999568	8553170	3	242,144,50,	0,3115,7653,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	231002770	231025055	chr2:231002770-231025055	0	+	231002770	231002789	8553170	4	57,168,121,77,	0,16949,18842,22208,
#Partially deleted in new
chr2	231037489	231049714	chr2:231037489-231049714	3	+	231037565	231047021	789624	3	710,114,2833,	0,3806,9392,
#Partially deleted in new
chr2	231037561	231047246	chr2:231037561-231047246	0	+	231037561	231037561	8553170	3	100,114,365,	0,3734,9320,
#Partially deleted in new
chr2	231041106	231049719	chr2:231041106-231049719	0	+	231041106	231041106	8553170	2	303,2838,	0,5775,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	231052039	231052637	chr2:231052039-231052637	3	+	231052039	231052039	8553170	1	598,	0,
#Partially deleted in new
chr2	231056863	231172827	chr2:231056863-231172827	3	+	231057025	231170712	0	25	178,44,74,170,206,144,227,61,129,89,79,174,112,197,96,65,115,117,103,170,93,87,147,156,293,	0,4403,5384,5642,10042,13161,15325,18647,20170,21795,22672,23277,26019,26703,28155,30253,81872,89376,96700,104476,106771,108336,109007,113702,115671,
#Partially deleted in new
chr2	231056863	231172824	chr2:231056863-231172824	1	+	231057025	231170712	0	24	178,44,74,170,206,144,227,61,129,89,79,174,112,197,96,65,115,117,103,170,87,147,156,290,	0,4403,5384,5642,10042,13161,15325,18647,20170,21795,22672,23277,26019,26703,28155,30253,81872,89376,96700,104476,108336,109007,113702,115671,
#Partially deleted in new
chr2	231056866	231165235	chr2:231056866-231165235	0	+	231057025	231066918	789624	21	175,44,74,206,144,227,61,129,89,79,174,112,197,96,65,115,117,103,170,93,36,	0,4400,5381,10039,13158,15322,18644,20167,21792,22669,23274,26016,26700,28152,30250,81869,89373,96697,104473,106768,108333,
#Partially deleted in new
chr2	231056874	231070106	chr2:231056874-231070106	0	+	231057025	231070106	789624	6	167,44,74,188,206,82,	0,4392,5373,5631,10031,13150,
#Partially deleted in new
chr2	231056893	231170712	chr2:231056893-231170712	1	+	231057025	231170712	0	23	148,44,74,170,206,144,227,61,129,89,79,174,112,197,96,65,115,117,103,170,87,147,147,	0,4373,5354,5612,10012,13131,15295,18617,20140,21765,22642,23247,25989,26673,28125,30223,81842,89346,96670,104446,108306,108977,113672,
#Partially deleted in new
chr2	231060355	231172824	chr2:231060355-231172824	1	+	231060355	231170712	789624	25	14,46,74,170,206,144,227,61,129,89,79,174,112,197,96,65,115,117,103,170,93,87,147,156,290,	0,909,1892,2150,6550,9669,11833,15155,16678,18303,19180,19785,22527,23211,24663,26761,78380,85884,93208,100984,103279,104844,105515,110210,112179,
#Partially deleted in new
chr2	231066903	231075566	chr2:231066903-231075566	0	+	231066903	231075566	789624	4	208,144,83,56,	0,3121,5429,8607,
#Partially deleted in new
chr2	231083563	231139070	chr2:231083563-231139070	0	+	231083563	231138952	789624	4	200,96,65,335,	0,1455,3553,55172,
#Partially deleted in new
chr2	231085079	231109122	chr2:231085079-231109122	0	+	231085079	231085079	8553170	3	35,65,559,	0,2037,23484,
#Partially deleted in new
chr2	231108229	231125118	chr2:231108229-231125118	3	-	231108516	231123764	0	4	1180,201,718,147,	0,5499,15183,16742,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	231133461	231133630	chr2:231133461-231133630	3	+	231133461	231133461	8553170	1	169,	0,
#Partially deleted in new
chr2	231153468	231163710	chr2:231153468-231163710	0	+	231153468	231153468	8553170	3	198,170,76,	0,7871,10166,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	231163092	231165287	chr2:231163092-231165287	0	+	231163092	231163092	8553170	2	635,88,	0,2107,
#Deleted in new
chr2	231164958	231165894	chr2:231164958-231165894	0	+	231164958	231164958	8553170	2	328,24,	0,912,
#Partially deleted in new
chr2	231170401	231172760	chr2:231170401-231172760	0	+	231170401	231170401	8553170	2	320,226,	0,2133,
#Partially deleted in new
chr2	231198545	231345202	chr2:231198545-231345202	3	+	231206238	231345094	789624	21	153,92,126,171,156,93,25,158,99,35,112,93,91,124,140,77,75,91,56,105,228,	0,7652,9581,16285,18092,24182,28228,36678,41397,58040,60445,63760,72436,74409,78090,79836,83513,92807,97652,133247,146429,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr2	231198579	231373895	chr2:231198579-231373895	1	+	231206238	231371535	789624	25	119,90,126,171,156,93,25,158,99,35,112,93,91,124,140,77,75,91,56,105,116,137,130,173,2383,	0,7620,9547,16251,18058,24148,28194,36644,41363,58006,60411,63726,72402,74375,78056,79802,83479,92773,97618,133213,146395,157218,162174,171373,172933,
#Partially deleted in new
chr2	231198642	231215280	chr2:231198642-231215280	0	+	231198642	231198642	8553170	4	56,92,126,450,	0,7555,9484,16188,
#Partially deleted in new
chr2	231198752	231216788	chr2:231198752-231216788	0	+	231206238	231216788	789624	5	189,92,126,171,151,	0,7445,9374,16078,17885,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr2	231206238	231374837	chr2:231206238-231374837	1	+	231206238	231371535	789624	24	51,126,171,156,93,25,158,99,35,112,93,91,124,140,77,75,91,56,105,116,137,130,173,3325,	0,1888,8592,10399,16489,20535,28985,33704,50347,52752,56067,64743,66716,70397,72143,75820,85114,89959,125554,138736,149559,154515,163714,165274,
#Partially deleted in new
chr2	231214933	231235354	chr2:231214933-231235354	0	+	231214933	231214933	8553170	5	207,156,93,25,131,	0,1704,7794,11840,20290,
#Partially deleted in new
chr2	231235339	231240157	chr2:231235339-231240157	0	+	231235339	231240122	789624	2	42,215,	0,4603,
#Partially deleted in new
chr2	231235351	231276776	chr2:231235351-231276776	0	+	231235351	231276776	789624	7	30,35,112,93,91,124,141,	0,21234,23639,26954,35630,37603,41284,
#Deleted in new
chr2	231256096	231256306	chr2:231256096-231256306	7	+	231256096	231256096	16724991	1	210,	0,
#Partially deleted in new
chr2	231258964	231278427	chr2:231258964-231278427	0	+	231258964	231258964	8553170	5	138,93,124,140,46,	0,3341,13990,17671,19417,
#Partially deleted in new
chr2	231258968	231276775	chr2:231258968-231276775	0	+	231258968	231276775	789624	5	134,93,91,124,140,	0,3337,12013,13986,17667,
#Partially deleted in new
chr2	231270531	231278456	chr2:231270531-231278456	0	+	231270655	231278456	789624	5	169,91,124,140,75,	0,450,2423,6104,7850,
#Partially deleted in new
chr2	231270742	231291435	chr2:231270742-231291435	0	+	231270742	231270742	8553170	6	330,124,140,77,75,83,	0,2212,5893,7639,11316,20610,
#Partially deleted in new
chr2	231270980	231345202	chr2:231270980-231345202	0	+	231270980	231288668	789624	10	92,124,140,77,75,62,91,56,105,228,	0,1974,5655,7401,11078,17679,20372,25217,60812,73994,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	231293819	231345202	chr2:231293819-231345202	0	+	231293819	231293819	8553170	3	2434,105,228,	0,37973,51155,
#Deleted in new
chr2	231362707	231362793	chr2:231362707-231362793	3	+	231362707	231362707	5263520	1	86,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	231370573	231372219	chr2:231370573-231372219	0	+	231370573	231370573	8553170	2	137,707,	0,939,
#Partially deleted in new
chr2	231388975	231394984	chr2:231388975-231394984	3	+	231388975	231388975	8553170	3	86,430,204,	0,4505,5805,
#Deleted in new
chr2	231393678	231394991	chr2:231393678-231394991	0	+	231393678	231393678	8553170	1	1313,	0,
#Deleted in new
chr2	231393781	231394991	chr2:231393781-231394991	1	+	231393781	231393781	8553170	2	129,337,	0,873,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	231395542	231401164	chr2:231395542-231401164	3	+	231395803	231398925	789624	2	272,3434,	0,2188,
#Deleted in new
chr2	231397175	231398257	chr2:231397175-231398257	0	+	231397175	231397175	8553170	2	100,527,	0,555,
#Deleted in new
chr2	231433922	231434426	chr2:231433922-231434426	7	-	231433922	231433922	16724991	1	504,	0,
#Deleted in new
chr2	231437100	231437421	chr2:231437100-231437421	7	-	231437100	231437100	16724991	1	321,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	231452194	231453153	chr2:231452194-231453153	3	+	231452194	231452194	8553170	3	68,430,70,	0,186,889,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	231453530	231464594	chr2:231453530-231464594	3	-	231455190	231464353	0	14	1737,224,127,134,124,158,124,125,142,87,198,478,117,259,	0,1870,2479,3100,3470,4112,4735,5470,6621,6947,7138,8009,9669,10805,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	231454907	231483641	chr2:231454907-231483641	0	-	231454907	231454907	8553170	13	360,224,127,134,124,158,860,142,87,198,478,117,958,	0,493,1102,1723,2093,2735,3358,5244,5570,5761,6632,8292,27776,
#Deleted in new
chr2	231455441	231458357	chr2:231455441-231458357	0	-	231455441	231458357	789624	7	183,127,134,124,72,158,92,	0,568,1189,1559,1844,2201,2824,
#Deleted in new
chr2	231455799	231455936	chr2:231455799-231455936	3	-	231455799	231455799	789624	1	137,	0,
#Deleted in new
chr2	231456009	231457410	chr2:231456009-231457410	0	-	231456009	231456009	8553170	3	127,134,410,	0,621,991,
#Deleted in new
chr2	231456443	231456523	chr2:231456443-231456523	3	-	231456443	231456443	789624	1	80,	0,
#Partially deleted in new
chr2	231457425	231460725	chr2:231457425-231460725	0	-	231457425	231457425	8553170	6	375,124,125,142,87,57,	0,840,1575,2726,3052,3243,
#Partially deleted in new
chr2	231460370	231460440	chr2:231460370-231460440	3	-	231460370	231460370	789624	1	70,	0,
#Partially deleted in new
chr2	231461593	231464207	chr2:231461593-231464207	0	-	231461593	231463286	789624	3	424,117,65,	0,1606,2549,
#Partially deleted in new
chr2	231461606	231464199	chr2:231461606-231464199	0	-	231461606	231463286	789624	3	411,117,40,	0,1593,2553,
#Partially deleted in new
chr2	231461650	231464180	chr2:231461650-231464180	0	-	231461650	231463286	789624	3	367,117,480,	0,1549,2050,
#Partially deleted in new
chr2	231461680	231463693	chr2:231461680-231463693	0	-	231461680	231463286	789624	3	337,117,108,	0,1519,1905,
#Partially deleted in new
chr2	231462991	231464379	chr2:231462991-231464379	0	-	231462991	231462991	8553170	2	325,44,	0,1344,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	231497089	231507256	chr2:231497089-231507256	7	-	231497089	231497089	16724991	5	163,125,121,142,88,	0,5991,7032,9410,10079,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	231501989	231502201	chr2:231501989-231502201	3	-	231501989	231501989	8553170	1	212,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	231508425	231514339	chr2:231508425-231514339	3	-	231508425	231508425	5263520	3	918,106,258,	0,5101,5656,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	231523159	231530495	chr2:231523159-231530495	3	-	231525042	231530361	789624	3	2266,895,137,	0,4963,7199,
#Deleted in new
chr2	231559902	231560364	chr2:231559902-231560364	7	+	231559902	231559902	16724991	1	462,	0,
#Deleted in new
chr2	231585863	231586327	chr2:231585863-231586327	7	+	231585863	231585863	16724991	1	464,	0,
#Deleted in new
chr2	231592900	231594283	chr2:231592900-231594283	3	+	231592951	231594139	789624	1	1383,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	231645997	231646273	chr2:231645997-231646273	3	-	231645997	231645997	8553170	1	276,	0,
#Partially deleted in new
chr2	231706894	231713013	chr2:231706894-231713013	0	+	231706894	231706894	8553170	5	334,72,94,74,210,	0,4453,4995,5548,5909,
#Partially deleted in new
chr2	231707629	231713465	chr2:231707629-231713465	0	+	231707765	231711409	789624	5	206,72,94,74,662,	0,3718,4260,4813,5174,
#Partially deleted in new
chr2	231707683	231713108	chr2:231707683-231713108	1	+	231707765	231712851	789624	6	152,38,72,94,74,305,	0,1030,3664,4206,4759,5120,
#Partially deleted in new
chr2	231708508	231713541	chr2:231708508-231713541	1	+	231708706	231712851	0	5	243,72,94,74,738,	0,2839,3381,3934,4295,
#Partially deleted in new
chr2	231708515	231713536	chr2:231708515-231713536	3	+	231708706	231712851	0	5	236,72,97,74,733,	0,2832,3371,3927,4288,
#Partially deleted in new
chr2	231708529	231712675	chr2:231708529-231712675	0	+	231708529	231708529	8553170	4	222,72,94,233,	0,2818,3360,3913,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	231708529	231713506	chr2:231708529-231713506	0	+	231708529	231708529	8553170	4	222,636,74,703,	0,2818,3913,4274,
#Partially deleted in new
chr2	231708535	231713289	chr2:231708535-231713289	1	+	231708706	231712851	789624	5	216,72,94,65,486,	0,2812,3354,3916,4268,
#Partially deleted in new
chr2	231709780	231712856	chr2:231709780-231712856	1	+	231710178	231712851	789624	5	521,72,94,74,53,	0,1567,2109,2662,3023,
#Partially deleted in new
chr2	231710426	231713268	chr2:231710426-231713268	0	+	231710426	231712851	789624	5	158,72,94,74,465,	0,921,1463,2016,2377,
#Deleted in new
chr2	231710490	231711383	chr2:231710490-231711383	0	+	231710490	231711383	789624	2	186,36,	0,857,
#Partially deleted in new
chr2	231711130	231711978	chr2:231711130-231711978	0	+	231711130	231711130	8553170	2	289,89,	0,759,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	231711524	231711647	chr2:231711524-231711647	3	+	231711524	231711524	8553170	1	123,	0,
#Deleted in new
chr2	231713313	231713398	chr2:231713313-231713398	3	+	231713313	231713313	5263520	1	85,	0,
#Partially deleted in new
chr2	231732424	231781309	chr2:231732424-231781309	3	-	231732951	231781114	0	5	609,106,126,89,245,	0,4762,5588,6675,48640,
#Partially deleted in new
chr2	231732803	231781291	chr2:231732803-231781291	1	-	231733016	231781114	789624	4	230,126,89,227,	0,5209,6296,48261,
#Partially deleted in new
chr2	231737186	231786272	chr2:231737186-231786272	0	-	231737186	231739181	789624	5	106,126,103,78,214,	0,826,1913,44625,48872,
#Partially deleted in new
chr2	231737421	231781263	chr2:231737421-231781263	0	-	231737421	231737421	8553170	3	717,89,199,	0,1678,43643,
#Deleted in new
chr2	231778722	231781282	chr2:231778722-231781282	0	-	231778722	231778722	789624	2	778,218,	0,2342,
#Partially deleted in new
chr2	231781670	231807724	chr2:231781670-231807724	3	+	231788570	231807645	789624	7	213,178,76,89,203,106,238,	0,6884,10062,12592,14435,17188,25816,
#Partially deleted in new
chr2	231781670	231809254	chr2:231781670-231809254	1	+	231788570	231807645	789624	5	213,178,203,106,1768,	0,6884,14435,17188,25816,
#Partially deleted in new
chr2	231781677	231807815	chr2:231781677-231807815	1	+	231781823	231807645	789624	6	206,76,89,203,106,329,	0,10055,12585,14428,17181,25809,
#Partially deleted in new
chr2	231781684	231807695	chr2:231781684-231807695	1	+	231794345	231807645	789624	5	199,89,203,106,209,	0,12578,14421,17174,25802,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	231781706	231796311	chr2:231781706-231796311	0	+	231788570	231790924	789624	6	177,178,252,76,89,206,	0,6848,9215,10026,12556,14399,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	231781706	231791169	chr2:231781706-231791169	0	+	231788570	231790969	789624	3	177,178,245,	0,6848,9218,
#Partially deleted in new
chr2	231781706	231788927	chr2:231781706-231788927	0	+	231781706	231781706	8553170	2	177,373,	0,6848,
#Partially deleted in new
chr2	231781707	231791976	chr2:231781707-231791976	0	+	231781707	231781707	8553170	3	176,178,244,	0,6847,10025,
#Partially deleted in new
chr2	231786382	231809254	chr2:231786382-231809254	1	+	231794345	231807645	789624	6	156,178,89,203,106,1768,	0,2172,7880,9723,12476,21104,
#Partially deleted in new
chr2	231786413	231809253	chr2:231786413-231809253	1	+	231788570	231807645	789624	7	125,178,76,89,203,106,1767,	0,2141,5319,7849,9692,12445,21073,
#Partially deleted in new
chr2	231786433	231798943	chr2:231786433-231798943	0	+	231788570	231798943	789624	4	105,178,203,85,	0,2121,9672,12425,
#Partially deleted in new
chr2	231786433	231809247	chr2:231786433-231809247	0	+	231788570	231794289	789624	6	105,178,89,203,106,1761,	0,2121,7829,9672,12425,21053,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	231786434	231791786	chr2:231786434-231791786	0	+	231788570	231790977	789624	4	104,178,223,54,	0,2120,4516,5298,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	231786435	231791762	chr2:231786435-231791762	0	+	231788570	231790924	789624	4	103,178,252,30,	0,2119,4486,5297,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	231786435	231791808	chr2:231786435-231791808	0	+	231788570	231791021	789624	4	103,178,227,76,	0,2119,4511,5297,
#Partially deleted in new
chr2	231786444	231808723	chr2:231786444-231808723	1	+	231788570	231807619	789624	8	94,178,76,89,203,106,68,1237,	0,2110,5288,7818,9661,12414,14695,21042,
#Partially deleted in new
chr2	231786444	231808764	chr2:231786444-231808764	0	+	231788570	231796179	789624	6	94,178,76,203,106,1278,	0,2110,5288,9661,12414,21042,
#Partially deleted in new
chr2	231786444	231789149	chr2:231786444-231789149	0	+	231786444	231786444	8553170	2	94,595,	0,2110,
#Partially deleted in new
chr2	231786447	231809253	chr2:231786447-231809253	1	+	231788570	231807619	789624	8	91,178,76,89,203,106,53,1767,	0,2107,5285,7815,9658,12411,14707,21039,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	231788688	231796145	chr2:231788688-231796145	0	+	231788688	231792082	789624	5	44,76,225,89,40,	0,3044,3365,5574,7417,
#Deleted in new
chr2	231789480	231789887	chr2:231789480-231789887	7	-	231789480	231789480	16724991	1	407,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	231789653	231808723	chr2:231789653-231808723	0	+	231789653	231789653	8553170	7	1520,76,89,203,106,68,1237,	0,2079,4609,6452,9205,11486,17833,
#Partially deleted in new
chr2	231791603	231807797	chr2:231791603-231807797	0	+	231791603	231791603	8553170	5	205,89,203,106,311,	0,2659,4502,7255,15883,
#Partially deleted in new
chr2	231793515	231808722	chr2:231793515-231808722	0	+	231793515	231793515	8553170	4	836,203,106,1236,	0,2590,5343,13971,
#Partially deleted in new
chr2	231796186	231808724	chr2:231796186-231808724	0	+	231796186	231808575	789624	4	122,106,136,304,	0,2672,11300,12234,
#Deleted in new
chr2	231809845	231812352	chr2:231809845-231812352	3	+	231809845	231809845	8553170	1	2507,	0,
#Deleted in new
chr2	231810347	231810844	chr2:231810347-231810844	7	-	231810347	231810347	16724991	1	497,	0,
#Deleted in new
chr2	231892241	231892298	chr2:231892241-231892298	3	-	231892241	231892241	5263520	1	57,	0,
#Deleted in new
chr2	231921819	231926403	chr2:231921819-231926403	3	-	231925424	231926249	0	3	496,311,244,	0,3585,4340,
#Deleted in new
chr2	231925384	231926328	chr2:231925384-231926328	1	-	231925424	231926249	0	2	331,169,	0,775,
#Partially deleted in new
chr2	231961244	232344350	chr2:231961244-232344350	1	+	232014927	232343575	789624	14	521,145,158,54,102,235,101,248,174,80,113,108,156,1006,	0,53590,54269,63032,68734,126242,169374,175227,202214,249081,277288,287994,301962,382100,
#Partially deleted in new
chr2	231961582	232337197	chr2:231961582-232337197	3	+	232014927	232336630	789624	21	183,145,158,54,102,235,101,248,174,80,113,108,234,80,184,87,148,131,105,102,729,	0,53252,53931,62694,68396,125904,169036,174889,201876,248743,276950,287656,301624,338457,368230,369107,372257,372786,373048,374190,374886,
#Partially deleted in new
chr2	231961683	232337198	chr2:231961683-232337198	0	+	232014927	232330699	789624	21	82,145,158,54,102,235,101,248,174,80,113,108,234,80,111,87,148,131,105,102,730,	0,53151,53830,62593,68295,125803,168935,174788,201775,248642,276849,287555,301523,338356,368202,369006,372156,372685,372947,374089,374785,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	231961683	232131890	chr2:231961683-232131890	1	+	232014927	232130767	789624	7	82,145,158,54,102,235,1272,	0,53151,53830,62593,68295,125803,168935,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr2	231961691	232336555	chr2:231961691-232336555	0	+	232014927	232130767	789624	19	74,145,158,54,102,235,325,174,80,113,108,234,80,114,87,148,131,105,783,	0,53143,53822,62585,68287,125795,168927,201767,248634,276841,287547,301515,338348,368191,368998,372148,372677,372939,374081,
#Partially deleted in new
chr2	231961707	232087552	chr2:231961707-232087552	0	+	232014927	232087552	789624	6	58,132,158,54,102,66,	0,53140,53806,62569,68271,125779,
#Partially deleted in new
chr2	231978487	232015720	chr2:231978487-232015720	3	-	231978487	231978487	8553170	2	291,100,	0,37133,
#Partially deleted in new
chr2	232014927	232336630	chr2:232014927-232336630	1	+	232014927	232336630	789624	20	52,158,54,102,235,101,248,174,80,113,108,234,80,184,87,148,131,105,102,162,	0,586,9349,15051,72559,115691,121544,148531,195398,223605,234311,248279,285112,314885,315762,318912,319441,319703,320845,321541,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr2	232014927	232336977	chr2:232014927-232336977	0	+	232014927	232163520	789624	24	52,158,54,102,235,59,101,248,174,250,80,113,108,845,234,80,184,87,257,148,131,105,102,764,	0,586,9349,15051,72559,96269,115691,121544,148531,183599,195398,223605,234311,244913,248279,285112,314885,315762,316742,318912,319441,319703,320845,321286,
#Partially deleted in new
chr2	232015600	232087844	chr2:232015600-232087844	0	+	232015600	232015600	8553170	4	71,54,102,358,	0,8676,14378,71886,
#Partially deleted in new
chr2	232015851	232130875	chr2:232015851-232130875	0	+	232015851	232015851	8553170	6	148,52,54,102,235,257,	0,7225,8425,14127,71635,114767,
#Partially deleted in new
chr2	232163603	232334454	chr2:232163603-232334454	0	+	232163603	232334454	789624	10	29,80,113,108,234,80,184,87,148,86,	0,46722,74929,85635,99603,136436,166209,167086,170236,170765,
#Partially deleted in new
chr2	232249339	232307778	chr2:232249339-232307778	0	+	232249339	232249339	8553170	4	7,234,80,243,	0,13867,50700,58196,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	232328507	232336976	chr2:232328507-232336976	0	+	232328507	232328507	8553170	4	1489,87,148,2608,	0,2182,5332,5861,
#Partially deleted in new
chr2	232333942	232340999	chr2:232333942-232340999	0	+	232333942	232340930	789624	5	45,131,105,102,276,	0,426,688,1830,6781,
#Partially deleted in new
chr2	232334659	232336974	chr2:232334659-232336974	0	+	232334659	232336630	789624	3	76,102,665,	0,1113,1650,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	232335784	232336973	chr2:232335784-232336973	0	+	232335784	232336257	789624	2	90,833,	0,356,
#Deleted in new
chr2	232343115	232343903	chr2:232343115-232343903	7	+	232343115	232343115	16724991	1	788,	0,
#Deleted in new
chr2	232349753	232351309	chr2:232349753-232351309	7	-	232349753	232349753	16724991	3	76,214,447,	0,576,1109,
#Partially deleted in new
chr2	232368575	232368697	chr2:232368575-232368697	7	+	232368575	232368575	16724991	1	122,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	232378533	232382889	chr2:232378533-232382889	3	+	232378802	232381795	0	11	345,117,116,175,173,135,73,135,192,117,1393,	0,437,666,979,1230,1652,1886,2089,2306,2717,2963,
#Partially deleted in new
chr2	232378723	232379784	chr2:232378723-232379784	0	+	232378723	232378723	8553170	4	155,117,116,272,	0,247,476,789,
#Partially deleted in new
chr2	232379634	232381674	chr2:232379634-232381674	3	-	232379634	232379634	8553170	3	124,157,200,	0,1246,1840,
#Partially deleted in new
chr2	232379758	232381037	chr2:232379758-232381037	1	-	232379758	232379758	8553170	2	199,157,	0,1122,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	232381238	232382609	chr2:232381238-232382609	0	+	232381238	232381238	8553170	2	129,1113,	0,258,
#Partially deleted in new
chr2	232385749	232387044	chr2:232385749-232387044	7	-	232385749	232385749	16724991	1	1295,	0,
#Partially deleted in new
chr2	232386700	232387457	chr2:232386700-232387457	5	-	232386700	232386700	16724991	1	757,	0,
#Partially deleted in new
chr2	232406842	232410714	chr2:232406842-232410714	3	+	232406894	232409872	789624	11	119,117,116,175,173,135,73,135,192,117,1141,	0,214,443,751,1002,1424,1658,1861,2078,2489,2731,
#Deleted in new
chr2	232415817	232419816	chr2:232415817-232419816	7	-	232415817	232415817	16724991	9	58,104,68,98,305,172,86,69,782,	0,226,477,776,1345,2161,2388,2581,3217,
#Deleted in new
chr2	232420660	232421461	chr2:232420660-232421461	3	-	232420660	232420660	8553170	2	513,63,	0,738,
#Partially deleted in new
chr2	232442033	232447418	chr2:232442033-232447418	7	+	232442033	232442033	16724991	5	73,93,131,105,157,	0,2833,3286,3548,5228,
#Deleted in new
chr2	232456122	232460032	chr2:232456122-232460032	3	+	232456199	232459146	789624	11	144,117,116,175,173,135,73,135,192,117,1173,	0,226,457,776,1027,1442,1672,1875,2094,2509,2737,
#Deleted in new
chr2	232456124	232459284	chr2:232456124-232459284	0	+	232456199	232456352	789624	10	341,116,175,173,135,73,135,192,117,425,	0,455,774,1025,1440,1670,1873,2092,2507,2735,
#Deleted in new
chr2	232479826	232487828	chr2:232479826-232487828	3	-	232480152	232486653	789624	18	426,77,96,66,125,68,52,59,104,75,99,223,125,93,111,69,887,110,	0,572,891,1264,1679,1955,2591,2723,3024,3278,3589,4174,4645,4974,5154,5372,6041,7892,
#Deleted in new
chr2	232479826	232482458	chr2:232479826-232482458	0	-	232480152	232482458	789624	6	426,77,96,125,68,41,	0,572,891,1679,1955,2591,
#Deleted in new
chr2	232479826	232487821	chr2:232479826-232487821	0	-	232479826	232479826	8553170	17	426,77,96,66,125,68,52,59,104,75,99,223,125,93,287,887,103,	0,572,891,1264,1679,1955,2591,2723,3024,3278,3589,4174,4645,4974,5154,6041,7892,
#Deleted in new
chr2	232480152	232486653	chr2:232480152-232486653	1	-	232480152	232486653	789624	17	100,77,96,66,125,68,52,59,98,75,99,223,125,93,111,69,786,	0,246,565,938,1353,1629,2265,2397,2704,2952,3263,3848,4319,4648,4828,5046,5715,
#Deleted in new
chr2	232520462	232525712	chr2:232520462-232525712	1	+	232520598	232525506	789624	13	233,108,51,190,100,160,143,163,177,165,63,107,497,	0,858,1353,1508,2052,2239,2597,2953,3306,3576,3844,4275,4753,
#Deleted in new
chr2	232520462	232525716	chr2:232520462-232525716	3	+	232520598	232525506	789624	13	233,108,51,190,100,160,143,163,174,165,63,107,501,	0,858,1353,1508,2052,2239,2597,2953,3309,3576,3844,4275,4753,
#Deleted in new
chr2	232522500	232523330	chr2:232522500-232523330	0	+	232522500	232522500	8553170	2	361,271,	0,559,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	232525992	232536667	chr2:232525992-232536667	0	+	232526215	232530137	789624	11	275,146,45,110,156,201,112,115,205,119,1538,	0,536,1408,2269,2508,3946,5359,5549,7938,8231,9137,
#Partially deleted in new
chr2	232526159	232528913	chr2:232526159-232528913	0	+	232526215	232528913	789624	5	108,146,110,156,52,	0,369,2102,2341,2702,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	232526159	232536665	chr2:232526159-232536665	1	+	232526215	232535312	789624	11	108,146,110,156,110,201,112,115,205,119,1536,	0,369,2102,2341,2702,3779,5192,5382,7771,8064,8970,
#Partially deleted in new
chr2	232526183	232535838	chr2:232526183-232535838	3	+	232526215	232535312	789624	12	84,146,45,110,156,110,201,112,115,205,119,709,	0,345,1217,2078,2317,2678,3755,5168,5358,7747,8040,8946,
#Partially deleted in new
chr2	232526187	232531627	chr2:232526187-232531627	0	+	232526215	232531358	789624	7	80,146,45,110,156,112,86,	0,341,1213,2074,2313,5164,5354,
#Partially deleted in new
chr2	232526190	232535345	chr2:232526190-232535345	0	+	232526215	232528506	789624	12	77,146,45,78,156,110,201,112,115,205,119,216,	0,338,1210,2071,2310,2671,3748,5161,5351,7740,8033,8939,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	232539726	232546403	chr2:232539726-232546403	3	+	232539747	232545716	789624	12	76,140,45,110,156,98,201,115,115,214,131,861,	0,265,654,875,1647,2696,3155,3548,3858,4640,5045,5816,
#Deleted in new
chr2	232539726	232541882	chr2:232539726-232541882	0	+	232539726	232539726	8553170	5	76,140,45,110,509,	0,265,654,875,1647,
#Partially deleted in new
chr2	232539747	232545716	chr2:232539747-232545716	1	+	232539747	232545716	789624	11	55,140,45,110,98,201,115,115,214,131,174,	0,244,633,854,2675,3134,3527,3837,4619,5024,5795,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	232547969	232550592	chr2:232547969-232550592	3	-	232548106	232549882	789624	1	2623,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	232550051	232569210	chr2:232550051-232569210	3	+	232550724	232569017	0	7	693,115,135,105,153,137,266,	0,6364,7832,14195,16777,17026,18893,
#Deleted in new
chr2	232550473	232550573	chr2:232550473-232550573	3	-	232550473	232550473	5263520	1	100,	0,
#Partially deleted in new
chr2	232550673	232556596	chr2:232550673-232556596	0	+	232550673	232550673	8553170	2	71,181,	0,5742,
#Partially deleted in new
chr2	232550682	232583644	chr2:232550682-232583644	1	+	232550724	232580943	0	7	62,115,135,105,153,137,2741,	0,5733,7201,13564,16146,16395,30221,
#Partially deleted in new
chr2	232550682	232583642	chr2:232550682-232583642	1	+	232550724	232574308	789624	8	62,115,135,105,153,137,79,2739,	0,5733,7201,13564,16146,16395,23580,30221,
#Partially deleted in new
chr2	232550688	232568020	chr2:232550688-232568020	1	+	232550724	232567251	789624	5	56,115,105,153,943,	0,5727,13558,16140,16389,
#Partially deleted in new
chr2	232550688	232567527	chr2:232550688-232567527	1	+	232550724	232567251	789624	6	56,115,135,105,153,450,	0,5727,7195,13558,16140,16389,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	232550690	232558824	chr2:232550690-232558824	0	+	232550690	232550690	8553170	3	54,115,941,	0,5725,7193,
#Partially deleted in new
chr2	232550691	232569178	chr2:232550691-232569178	1	+	232550724	232569017	789624	6	53,115,105,153,137,234,	0,5724,13555,16137,16386,18253,
#Partially deleted in new
chr2	232550703	232580956	chr2:232550703-232580956	1	+	232550724	232580943	789624	6	41,115,105,153,137,53,	0,5712,13543,16125,16374,30200,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	232550805	232557648	chr2:232550805-232557648	0	+	232550805	232550805	8553170	4	413,33,115,120,	0,3049,5610,6723,
#Partially deleted in new
chr2	232550806	232567205	chr2:232550806-232567205	0	+	232551213	232567205	789624	6	412,115,135,105,153,128,	0,5609,7077,13440,16022,16271,
#Deleted in new
chr2	232566943	232569833	chr2:232566943-232569833	0	+	232566943	232566943	8553170	3	38,137,93,	0,134,2797,
#Partially deleted in new
chr2	232573720	232581062	chr2:232573720-232581062	0	+	232573720	232573720	8553170	2	416,159,	0,7183,
#Partially deleted in new
chr2	232574073	232581332	chr2:232574073-232581332	0	+	232574073	232581127	789624	3	63,79,429,	0,189,6830,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	232580947	232611971	chr2:232580947-232611971	1	-	232580947	232580947	8553170	6	357,158,238,55,141,213,	0,1036,3358,5744,29784,30811,
#Partially deleted in new
chr2	232581150	232584791	chr2:232581150-232584791	1	-	232581150	232581150	8553170	2	154,486,	0,3155,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	232581191	232611798	chr2:232581191-232611798	0	-	232581191	232581191	8553170	6	113,687,146,117,141,40,	0,4868,9803,14628,29540,30567,
#Partially deleted in new
chr2	232581192	232586489	chr2:232581192-232586489	2	-	232581192	232581192	8553170	4	112,158,238,430,	0,791,3113,4867,
#Partially deleted in new
chr2	232581213	232584776	chr2:232581213-232584776	0	-	232581213	232581213	8553170	4	91,158,238,37,	0,770,3092,3526,
#Partially deleted in new
chr2	232581301	232584372	chr2:232581301-232584372	1	-	232581301	232581301	8553170	2	840,67,	0,3004,
#Partially deleted in new
chr2	232584313	232595936	chr2:232584313-232595936	1	-	232584313	232584313	8553170	2	230,484,	0,11139,
#Partially deleted in new
chr2	232586248	232611971	chr2:232586248-232611971	0	-	232586248	232586248	8553170	2	498,213,	0,25510,
#Partially deleted in new
chr2	232586310	232591822	chr2:232586310-232591822	1	-	232586310	232586310	8553170	3	436,146,49,	0,4684,5463,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	232595536	232611971	chr2:232595536-232611971	0	-	232595536	232595536	8553170	3	400,141,213,	0,15195,16222,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	232595766	232611971	chr2:232595766-232611971	1	-	232595766	232595766	8553170	4	170,141,180,213,	0,14965,15708,15992,
#Partially deleted in new
chr2	232606056	232682340	chr2:232606056-232682340	1	+	232606159	232681719	789624	4	117,148,135,756,	0,56745,66252,75528,
#Partially deleted in new
chr2	232633227	232682781	chr2:232633227-232682781	3	+	232633704	232681719	789624	4	779,148,135,1197,	0,29574,39081,48357,
#Partially deleted in new
chr2	232633715	232681774	chr2:232633715-232681774	0	+	232633715	232638412	789624	5	291,79,148,135,190,	0,4690,29086,38593,47869,
#Partially deleted in new
chr2	232638140	232682774	chr2:232638140-232682774	1	+	232662835	232681719	789624	4	344,148,135,1190,	0,24661,34168,43444,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	232649848	232650136	chr2:232649848-232650136	3	+	232649848	232649848	8553170	1	288,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	232661694	232672438	chr2:232661694-232672438	0	+	232662835	232672438	789624	3	263,148,130,	0,1107,10614,
#Partially deleted in new
chr2	232662732	232682770	chr2:232662732-232682770	1	+	232662835	232681719	789624	3	217,135,1186,	0,9576,18852,
#Partially deleted in new
chr2	232662741	232682780	chr2:232662741-232682780	1	+	232662741	232681719	789624	4	11,148,135,1196,	0,60,9567,18843,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	232697298	232736214	chr2:232697298-232736214	0	+	232697298	232697298	8553170	5	94,66,70,84,452,	0,6125,37118,37856,38464,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	232697304	232735237	chr2:232697304-232735237	0	+	232735197	232735237	789624	6	88,70,66,105,118,83,	0,3280,6119,25249,27269,37850,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr2	232697304	232860575	chr2:232697304-232860575	1	+	232735197	232856860	789624	30	88,66,84,130,96,112,112,41,66,180,218,163,189,197,160,167,92,108,101,101,162,159,237,123,210,206,155,224,148,3783,	0,6119,37850,50310,51682,58918,63175,64091,79107,89845,93393,93703,93953,97443,98757,109186,112415,113939,115086,118332,119566,122522,135552,142544,146741,147064,148427,150043,152957,159488,
#Partially deleted in new
chr2	232697306	232858612	chr2:232697306-232858612	3	+	232735197	232856860	0	29	86,66,84,130,96,112,112,41,180,218,163,189,197,160,167,92,108,101,101,162,159,237,123,210,206,155,224,148,1820,	0,6117,37848,50308,51680,58916,63173,64089,89843,93391,93701,93951,97441,98755,109184,112413,113937,115084,118330,119564,122520,135550,142542,146739,147062,148425,150041,152955,159486,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	232697307	232756301	chr2:232697307-232756301	0	+	232735197	232756301	789624	6	85,70,84,130,96,79,	0,37109,37847,50307,51679,58915,
#Partially deleted in new
chr2	232697309	232858608	chr2:232697309-232858608	1	+	232735197	232856860	789624	31	83,70,66,84,130,96,112,112,41,66,180,218,163,189,197,160,167,92,108,101,101,162,159,237,123,210,206,155,224,148,1816,	0,3275,6114,37845,50305,51677,58913,63170,64086,79102,89840,93388,93698,93948,97438,98752,109181,112410,113934,115081,118327,119561,122517,135547,142539,146736,147059,148422,150038,152952,159483,
#Partially deleted in new
chr2	232697309	232760559	chr2:232697309-232760559	0	+	232735197	232760559	789624	6	83,70,66,84,89,74,	0,3275,6114,37845,50305,63176,
#Partially deleted in new
chr2	232697322	232735451	chr2:232697322-232735451	0	+	232697322	232697322	8553170	2	70,297,	0,37832,
#Partially deleted in new
chr2	232697329	232736234	chr2:232697329-232736234	0	+	232697329	232697329	8553170	4	63,66,84,472,	0,6094,37825,38433,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr2	232697330	232858627	chr2:232697330-232858627	1	+	232735197	232856860	0	31	62,70,66,70,84,130,96,112,112,41,180,218,163,189,197,160,167,92,108,101,101,162,159,237,123,210,206,155,224,148,1835,	0,3254,6093,37086,37824,50284,51656,58892,63149,64065,89819,93367,93677,93927,97417,98731,109160,112389,113913,115060,118306,119540,122496,135526,142518,146715,147038,148401,150017,152931,159462,
#Partially deleted in new
chr2	232697330	232756235	chr2:232697330-232756235	0	+	232735197	232756235	789624	7	62,66,113,84,130,96,13,	0,6093,33791,37824,50284,51656,58892,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	232697330	232756254	chr2:232697330-232756254	0	+	232735197	232756254	789624	7	62,66,118,84,130,96,32,	0,6093,27243,37824,50284,51656,58892,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	232697330	232756293	chr2:232697330-232756293	0	+	232735197	232756293	789624	6	62,118,84,130,96,71,	0,27243,37824,50284,51656,58892,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	232697330	232735961	chr2:232697330-232735961	0	+	232697330	232697330	8553170	5	62,66,118,84,199,	0,6093,27243,37824,38432,
#Partially deleted in new
chr2	232697330	232736295	chr2:232697330-232736295	0	+	232697330	232697330	789624	5	62,70,66,84,543,	0,3254,6093,37824,38422,
#Partially deleted in new
chr2	232697330	232735588	chr2:232697330-232735588	0	+	232697330	232697330	8553170	3	62,66,434,	0,6093,37824,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	232697330	232736037	chr2:232697330-232736037	0	+	232697330	232697330	8553170	5	62,66,70,84,285,	0,6093,37086,37824,38422,
#Partially deleted in new
chr2	232697332	232816993	chr2:232697332-232816993	0	+	232735197	232816993	789624	18	60,66,84,130,96,112,180,200,163,189,197,160,167,92,108,101,101,123,	0,6091,37822,50282,51654,58890,89817,93383,93675,93925,97415,98729,109158,112387,113911,115058,118304,119538,
#Partially deleted in new
chr2	232697337	232858627	chr2:232697337-232858627	1	+	232735197	232856860	0	28	55,84,130,96,112,112,41,180,200,163,189,197,160,167,92,108,101,101,162,159,237,123,210,206,155,224,148,1835,	0,37817,50277,51649,58885,63142,64058,89812,93378,93670,93920,97410,98724,109153,112382,113906,115053,118299,119533,122489,135519,142511,146708,147031,148394,150010,152924,159455,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	232697343	232736268	chr2:232697343-232736268	0	+	232697343	232697343	8553170	5	49,66,91,84,506,	0,6080,21694,37811,38419,
#Partially deleted in new
chr2	232697345	232858608	chr2:232697345-232858608	1	+	232735197	232856860	0	31	47,70,66,84,130,96,112,112,41,66,180,218,163,186,197,160,167,92,108,101,101,162,159,237,123,210,206,155,224,148,1816,	0,3239,6078,37809,50269,51641,58877,63134,64050,79066,89804,93352,93662,93915,97402,98716,109145,112374,113898,115045,118291,119525,122481,135511,142503,146700,147023,148386,150002,152916,159447,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	232697348	232705947	chr2:232697348-232705947	0	+	232697348	232697348	8553170	3	44,66,515,	0,6075,8084,
#Partially deleted in new
chr2	232697349	232771424	chr2:232697349-232771424	0	+	232697349	232697349	8553170	9	43,66,84,130,96,112,112,41,401,	0,6074,37805,50265,51637,58873,63130,64046,73674,
#Partially deleted in new
chr2	232697351	232756274	chr2:232697351-232756274	0	+	232735197	232756274	789624	7	41,66,137,84,130,96,52,	0,6072,33770,37803,50263,51635,58871,
#Partially deleted in new
chr2	232697351	232819982	chr2:232697351-232819982	0	+	232735197	232819982	789624	21	41,66,84,130,96,112,112,41,180,200,163,189,197,160,167,92,108,101,101,162,156,	0,6072,37803,50263,51635,58871,63128,64044,89798,93364,93656,93906,97396,98710,109139,112368,113892,115039,118285,119519,122475,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	232697361	232736541	chr2:232697361-232736541	0	+	232697361	232697361	789624	7	31,70,66,118,113,84,779,	0,3223,6062,27212,33760,37793,38401,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	232697368	232736015	chr2:232697368-232736015	0	+	232697368	232697368	8553170	6	24,70,66,70,84,263,	0,3216,6055,37048,37786,38384,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	232697368	232736342	chr2:232697368-232736342	0	+	232697368	232697368	8553170	6	24,39,66,70,84,580,	0,900,6055,37048,37786,38394,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	232697369	232736645	chr2:232697369-232736645	0	+	232697369	232697369	789624	6	23,70,66,70,84,883,	0,3215,6054,37047,37785,38393,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	232697382	232736648	chr2:232697382-232736648	0	+	232697382	232697382	8553170	5	10,70,66,84,886,	0,3202,6041,37772,38380,
#Partially deleted in new
chr2	232703420	232787247	chr2:232703420-232787247	0	+	232735197	232760495	789624	7	69,84,130,96,108,41,98,	0,31734,44194,45566,57063,57975,83729,
#Deleted in new
chr2	232729522	232730198	chr2:232729522-232730198	7	-	232729522	232729522	16724991	1	676,	0,
#Partially deleted in new
chr2	232760145	232767949	chr2:232760145-232767949	3	-	232760145	232760145	8553170	3	509,71,271,	0,1347,7533,
#Partially deleted in new
chr2	232764435	232791035	chr2:232764435-232791035	0	+	232790729	232791035	789624	4	175,180,200,28,	0,22714,26280,26572,
#Partially deleted in new
chr2	232764443	232790850	chr2:232764443-232790850	0	+	232765954	232790850	789624	4	167,88,180,153,	0,1448,22706,26254,
#Partially deleted in new
chr2	232764461	232790915	chr2:232764461-232790915	0	+	232790729	232790915	789624	3	149,180,218,	0,22688,26236,
#Partially deleted in new
chr2	232765291	232768374	chr2:232765291-232768374	0	+	232765291	232765291	8553170	3	347,88,115,	0,600,2968,
#Partially deleted in new
chr2	232765484	232768397	chr2:232765484-232768397	0	+	232765484	232765484	8553170	3	61,88,138,	0,407,2775,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	232766463	232776568	chr2:232766463-232776568	3	-	232768190	232771362	789624	3	2350,476,124,	0,4439,9981,
#Partially deleted in new
chr2	232768075	232776565	chr2:232768075-232776565	1	-	232768752	232771362	789624	3	738,240,121,	0,3063,8369,
#Partially deleted in new
chr2	232768098	232790774	chr2:232768098-232790774	0	+	232768392	232790774	789624	3	307,180,77,	0,19051,22599,
#Partially deleted in new
chr2	232768101	232790915	chr2:232768101-232790915	0	+	232790729	232790915	789624	3	158,180,218,	0,19048,22596,
#Partially deleted in new
chr2	232768139	232771405	chr2:232768139-232771405	1	-	232768190	232771362	789624	2	674,503,	0,2763,
#Partially deleted in new
chr2	232768315	232771264	chr2:232768315-232771264	0	-	232768398	232771264	789624	2	133,362,	0,2587,
#Partially deleted in new
chr2	232768480	232776555	chr2:232768480-232776555	0	-	232768480	232771122	789624	3	333,243,111,	0,2422,7964,
#Partially deleted in new
chr2	232776751	232791337	chr2:232776751-232791337	0	+	232790729	232791337	789624	5	54,180,200,163,80,	0,10398,13964,14256,14506,
#Deleted in new
chr2	232782664	232782766	chr2:232782664-232782766	3	+	232782664	232782664	8553170	1	102,	0,
#Deleted in new
chr2	232788105	232791348	chr2:232788105-232791348	0	+	232788532	232791348	789624	4	485,218,163,91,	0,2592,2902,3152,
#Partially deleted in new
chr2	232788463	232794789	chr2:232788463-232794789	0	+	232788532	232791084	789624	5	127,49,159,189,42,	0,2234,2548,2794,6284,
#Partially deleted in new
chr2	232806613	232815909	chr2:232806613-232815909	0	+	232806613	232806613	8553170	5	44,92,108,101,273,	0,3106,4630,5777,9023,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	232810310	232858612	chr2:232810310-232858612	0	+	232810310	232810310	8553170	13	1041,101,101,162,159,237,123,210,206,155,224,148,1820,	0,2080,5326,6560,9516,22546,29538,33735,34058,35421,37037,39951,46482,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	232828652	232828751	chr2:232828652-232828751	3	+	232828652	232828652	8553170	1	99,	0,
#Partially deleted in new
chr2	232832870	232844196	chr2:232832870-232844196	0	+	232832870	232832870	8553170	3	276,123,151,	0,6978,11175,
#Partially deleted in new
chr2	232839852	232844544	chr2:232839852-232844544	0	+	232839852	232839852	8553170	3	119,244,176,	0,4159,4516,
#Partially deleted in new
chr2	232842959	232845787	chr2:232842959-232845787	0	+	232844069	232845787	789624	4	89,210,206,56,	0,1086,1409,2772,
#Partially deleted in new
chr2	232857269	232870400	chr2:232857269-232870400	0	+	232870341	232870400	789624	3	186,55,116,	0,11777,13015,
#Partially deleted in new
chr2	232869013	232876406	chr2:232869013-232876406	3	+	232870341	232876356	789624	4	88,130,183,160,	0,1271,6926,7233,
#Partially deleted in new
chr2	232869631	232876406	chr2:232869631-232876406	1	+	232870341	232876356	789624	4	190,130,183,160,	0,653,6308,6615,
#Partially deleted in new
chr2	232870283	232876397	chr2:232870283-232876397	1	+	232870341	232876356	789624	3	131,183,151,	0,5656,5963,
#Deleted in new
chr2	232875427	232876401	chr2:232875427-232876401	0	+	232875427	232875427	8553170	3	128,183,155,	0,512,819,
#Deleted in new
chr2	232875609	232876357	chr2:232875609-232876357	0	+	232875609	232875609	8553170	3	196,183,111,	0,330,637,
#Deleted in new
chr2	232875798	232878704	chr2:232875798-232878704	0	+	232875798	232875798	789624	2	324,2458,	0,448,
#Deleted in new
chr2	232876520	232878708	chr2:232876520-232878708	0	+	232876520	232876520	8553170	2	403,257,	0,1931,
#Partially deleted in new
chr2	232878685	233013272	chr2:232878685-233013272	3	-	232879488	232974890	789624	15	994,105,80,156,164,90,75,130,153,161,302,143,115,342,205,	0,2460,3500,4625,5295,6594,9347,12672,14212,16070,41598,48358,91528,95937,134382,
#Partially deleted in new
chr2	232879214	232928154	chr2:232879214-232928154	1	-	232879488	232927999	789624	13	465,105,80,156,164,90,75,130,153,161,302,143,262,	0,1931,2971,4096,4766,6065,8818,12143,13683,15541,41069,47829,48678,
#Partially deleted in new
chr2	232882228	232890980	chr2:232882228-232890980	0	-	232882228	232888035	789624	6	37,156,164,90,75,47,	0,1082,1752,3051,5804,8705,
#Partially deleted in new
chr2	232882252	232885536	chr2:232882252-232885536	0	-	232882252	232882252	8553170	4	13,156,164,257,	0,1058,1728,3027,
#Deleted in new
chr2	232884923	232890980	chr2:232884923-232890980	0	-	232884923	232884923	8553170	3	446,75,47,	0,3109,6010,
#Partially deleted in new
chr2	232885322	232901462	chr2:232885322-232901462	0	-	232885322	232894913	789624	6	47,75,130,153,161,101,	0,2710,6035,7575,9433,16039,
#Partially deleted in new
chr2	232894601	232928154	chr2:232894601-232928154	1	-	232894751	232927999	789624	4	315,302,143,262,	0,25682,32442,33291,
#Partially deleted in new
chr2	232970042	232974796	chr2:232970042-232974796	0	-	232970209	232974796	789624	2	286,174,	0,4580,
#Partially deleted in new
chr2	233012613	233015885	chr2:233012613-233015885	3	+	233012613	233012613	789624	3	356,108,179,	0,526,3093,
#Partially deleted in new
chr2	233012891	233015884	chr2:233012891-233015884	0	+	233012891	233012891	8553170	2	356,178,	0,2815,
#Deleted in new
chr2	233032671	233035057	chr2:233032671-233035057	3	+	233032671	233035057	0	2	201,942,	0,1444,
#Partially deleted in new
chr2	233059966	233207903	chr2:233059966-233207903	1	+	233060478	233206708	0	27	646,64,151,172,141,88,81,72,124,107,103,197,118,97,139,109,89,82,90,114,83,88,150,97,282,592,1198,	0,19368,62140,65781,70541,79875,86195,86400,87504,98346,101757,103740,104340,109338,110059,110529,111097,117298,122443,124441,125876,129883,133845,135432,138128,144159,146739,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	233060365	233141608	chr2:233060365-233141608	0	+	233060365	233060365	8553170	6	247,64,151,175,141,1767,	0,18969,61741,65379,70142,79476,
#Partially deleted in new
chr2	233060397	233207902	chr2:233060397-233207902	3	+	233060478	233206708	0	27	215,64,151,175,141,88,81,72,124,107,103,197,118,97,139,109,89,82,90,114,83,88,150,97,282,592,1197,	0,18937,61709,65347,70110,79444,85764,85969,87073,97915,101326,103309,103909,108907,109628,110098,110666,116867,122012,124010,125445,129452,133414,135001,137697,143728,146308,
#Partially deleted in new
chr2	233076261	233125805	chr2:233076261-233125805	0	+	233076261	233076261	8553170	4	158,64,151,58,	0,3073,45845,49486,
#Partially deleted in new
chr2	233120601	233130648	chr2:233120601-233130648	0	+	233120601	233120601	8553170	4	104,151,172,141,	0,1505,5146,9906,
#Partially deleted in new
chr2	233122215	233130859	chr2:233122215-233130859	0	+	233122215	233122215	8553170	3	42,175,352,	0,3529,8292,
#Partially deleted in new
chr2	233161723	233207903	chr2:233161723-233207903	0	+	233161723	233206708	789624	17	103,197,118,97,139,109,89,82,90,114,83,88,150,97,282,592,1198,	0,1983,2583,7581,8302,8772,9340,15541,20686,22684,24119,28126,32088,33675,36371,42402,44982,
#Partially deleted in new
chr2	233161788	233169329	chr2:233161788-233169329	0	+	233161788	233161788	8553170	4	38,220,118,25,	0,1918,2518,7516,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	233164300	233170576	chr2:233164300-233170576	0	+	233164300	233164300	8553170	5	124,86,97,139,81,	0,4519,5004,5725,6195,
#Partially deleted in new
chr2	233169559	233182482	chr2:233169559-233182482	0	+	233169559	233169559	8553170	5	605,109,89,82,73,	0,936,1504,7705,12850,
#Partially deleted in new
chr2	233170020	233171249	chr2:233170020-233171249	0	+	233170020	233170020	8553170	3	144,109,186,	0,475,1043,
#Partially deleted in new
chr2	233170373	233184483	chr2:233170373-233184483	0	+	233170373	233170373	8553170	5	231,89,82,90,76,	0,690,6891,12036,14034,
#Partially deleted in new
chr2	233195436	233206952	chr2:233195436-233206952	0	+	233195436	233206757	789624	3	59,282,247,	0,2658,11269,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	233204641	233205652	chr2:233204641-233205652	0	+	233204641	233204771	789624	2	473,55,	0,956,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	233205198	233205479	chr2:233205198-233205479	3	+	233205198	233205198	8553170	1	281,	0,
#Partially deleted in new
chr2	233210050	233264920	chr2:233210050-233264920	0	+	233263172	233264920	789624	6	29,257,94,106,74,29,	0,276,46051,53079,53941,54841,
#Partially deleted in new
chr2	233251570	233295673	chr2:233251570-233295673	1	+	233251827	233294350	0	14	372,94,66,87,103,106,71,72,121,106,150,48,102,1417,	0,4531,18431,21395,23105,25997,29534,31111,38283,38677,40557,40816,41685,42686,
#Partially deleted in new
chr2	233251570	233295674	chr2:233251570-233295674	3	+	233251827	233294350	0	18	372,94,106,74,252,66,87,57,103,106,71,72,121,106,150,48,102,1418,	0,4531,11559,12421,13321,18431,21395,22150,23105,25997,29534,31111,38283,38677,40557,40816,41685,42686,
#Partially deleted in new
chr2	233251669	233274738	chr2:233251669-233274738	0	+	233251827	233274738	789624	7	273,94,66,87,57,51,63,	0,4432,18332,21296,22051,22321,23006,
#Partially deleted in new
chr2	233251671	233295674	chr2:233251671-233295674	1	+	233251827	233294350	0	15	271,94,66,87,57,103,43,29,72,121,106,150,48,102,1418,	0,4430,18330,21294,22049,23004,25896,29475,31010,38182,38576,40456,40715,41584,42585,
#Partially deleted in new
chr2	233251672	233295674	chr2:233251672-233295674	0	+	233251827	233256105	789624	18	268,94,106,74,252,66,87,57,103,106,71,72,121,106,150,48,102,1418,	0,4429,11457,12319,13219,18329,21293,22048,23003,25895,29432,31009,38181,38575,40455,40714,41583,42584,
#Partially deleted in new
chr2	233251675	233277594	chr2:233251675-233277594	0	+	233251827	233277594	789624	6	267,94,66,87,103,27,	0,4426,18326,21290,23000,25892,
#Partially deleted in new
chr2	233251681	233295666	chr2:233251681-233295666	0	+	233251681	233251681	8553170	17	261,94,106,74,252,66,87,57,103,106,71,72,500,150,48,102,1410,	0,4420,11448,12310,13210,18320,21284,22039,22994,25886,29423,31000,38172,40446,40705,41574,42575,
#Partially deleted in new
chr2	233251684	233264101	chr2:233251684-233264101	0	+	233251684	233251684	8553170	4	258,94,106,110,	0,4417,11445,12307,
#Partially deleted in new
chr2	233251700	233295666	chr2:233251700-233295666	0	+	233251700	233251700	8553170	16	242,94,106,74,252,66,812,103,106,71,72,500,150,48,102,1410,	0,4401,11429,12291,13191,18301,21265,22975,25867,29404,30981,38153,40427,40686,41555,42556,
#Partially deleted in new
chr2	233251704	233273739	chr2:233251704-233273739	0	+	233251827	233273739	789624	7	238,94,106,74,66,87,19,	0,4397,11425,12287,18297,21261,22016,
#Partially deleted in new
chr2	233251705	233295674	chr2:233251705-233295674	1	+	233251827	233294350	0	17	237,94,106,74,252,66,87,103,106,71,72,121,106,150,48,102,1418,	0,4396,11424,12286,13186,18296,21260,22970,25862,29399,30976,38148,38542,40422,40681,41550,42551,
#Partially deleted in new
chr2	233251713	233295674	chr2:233251713-233295674	1	+	233251827	233294350	789624	19	229,94,106,74,252,66,87,57,51,103,106,71,72,121,106,150,48,102,1418,	0,4388,11416,12278,13178,18288,21252,22007,22277,22962,25854,29391,30968,38140,38534,40414,40673,41542,42543,
#Partially deleted in new
chr2	233265954	233289883	chr2:233265954-233289883	0	+	233265954	233265954	8553170	8	205,66,87,103,106,71,72,30,	0,4047,7011,8721,11613,15150,16727,23899,
#Partially deleted in new
chr2	233274303	233281114	chr2:233274303-233281114	0	+	233274303	233274303	8553170	3	475,106,10,	0,3264,6801,
#Partially deleted in new
chr2	233275378	233290348	chr2:233275378-233290348	0	+	233275378	233275378	8553170	6	89,106,71,72,121,101,	0,2189,5726,7303,14475,14869,
#Deleted in new
chr2	233275726	233276002	chr2:233275726-233276002	3	+	233275726	233275726	789624	1	276,	0,
#Partially deleted in new
chr2	233277147	233282995	chr2:233277147-233282995	0	+	233277147	233277147	8553170	3	526,71,314,	0,3957,5534,
#Deleted in new
chr2	233288675	233288940	chr2:233288675-233288940	3	+	233288675	233288675	789624	1	265,	0,
#Deleted in new
chr2	233290106	233294519	chr2:233290106-233294519	0	+	233290106	233290106	8553170	5	247,145,48,102,263,	0,2026,2280,3149,4150,
#Partially deleted in new
chr2	233307815	233327192	chr2:233307815-233327192	0	+	233309189	233327192	789624	7	207,152,61,45,194,60,72,	0,1297,8259,10935,12814,15130,19305,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr2	233307815	233347054	chr2:233307815-233347054	0	+	233307815	233307815	8553170	13	207,103,61,45,60,2457,3172,138,78,24,56,10,248,	0,1346,8259,10935,15130,19305,23824,27146,30860,32639,34455,38587,38991,
#Partially deleted in new
chr2	233307820	233347055	chr2:233307820-233347055	3	+	233309189	233346912	789624	16	202,103,61,45,194,60,77,136,85,73,138,78,24,56,10,249,	0,1341,8254,10930,12809,15125,19300,20657,21672,23819,27141,30855,32634,34450,38582,38986,
#Partially deleted in new
chr2	233307878	233322969	chr2:233307878-233322969	0	+	233307878	233307878	8553170	5	144,61,45,194,24,	0,8196,10872,12751,15067,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	233307879	233347054	chr2:233307879-233347054	0	+	233307879	233307879	8553170	16	143,103,61,45,194,60,1493,85,73,580,138,78,24,56,10,248,	0,1282,8195,10871,12750,15066,19241,21613,23760,26352,27082,30796,32575,34391,38523,38927,
#Partially deleted in new
chr2	233307883	233323004	chr2:233307883-233323004	0	+	233307883	233307883	8553170	2	139,59,	0,15062,
#Partially deleted in new
chr2	233307884	233319004	chr2:233307884-233319004	0	+	233309189	233319004	789624	4	138,103,61,254,	0,1277,8190,10866,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr2	233307931	233347055	chr2:233307931-233347055	0	+	233307931	233307931	8553170	14	91,118,61,45,60,1493,85,73,138,78,24,56,10,249,	0,1230,8143,10819,15014,19189,21561,23708,27030,30744,32523,34339,38471,38875,
#Partially deleted in new
chr2	233307973	233327176	chr2:233307973-233327176	0	+	233309189	233318783	789624	6	49,152,45,194,60,56,	0,1139,10777,12656,14972,19147,
#Partially deleted in new
chr2	233316089	233328613	chr2:233316089-233328613	0	+	233316089	233316089	8553170	6	46,45,121,60,77,136,	0,2661,4613,6856,11031,12388,
#Deleted in new
chr2	233319547	233320724	chr2:233319547-233320724	0	+	233319547	233319547	8553170	2	476,95,	0,1082,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	233327948	233346191	chr2:233327948-233346191	0	+	233327948	233327948	8553170	7	665,85,73,138,78,24,3921,	0,1544,3691,7013,10727,12506,14322,
#Partially deleted in new
chr2	233331522	233346412	chr2:233331522-233346412	0	+	233331522	233331522	8553170	6	190,138,78,24,56,10,	0,3439,7153,8932,10748,14880,
#Partially deleted in new
chr2	233334715	233340474	chr2:233334715-233340474	0	+	233334715	233334715	8553170	3	384,78,20,	0,3960,5739,
#Partially deleted in new
chr2	233338525	233347055	chr2:233338525-233347055	0	+	233338525	233338525	8553170	5	228,24,56,10,249,	0,1929,3745,7877,8281,
#Partially deleted in new
chr2	233343687	233347055	chr2:233343687-233347055	0	+	233343687	233343687	8553170	3	63,10,249,	0,2715,3119,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	233351131	233353416	chr2:233351131-233353416	3	-	233351131	233351131	8553170	1	2285,	0,
#Partially deleted in new
chr2	233354506	233472100	chr2:233354506-233472100	3	+	233354518	233469460	0	30	168,111,81,105,133,107,126,103,163,109,140,85,95,100,274,150,129,97,111,97,108,114,135,152,112,93,120,118,131,2730,	0,33750,35896,79873,80262,81311,81809,82870,83710,87380,91116,92205,93580,93769,94596,95475,96415,97457,100256,102392,102714,103777,105250,105687,107841,108136,109657,112579,113916,114864,
#Partially deleted in new
chr2	233354507	233435894	chr2:233354507-233435894	0	+	233354518	233435894	789624	4	167,105,133,77,	0,79872,80261,81310,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	233354571	233392399	chr2:233354571-233392399	0	+	233354571	233392264	789624	4	103,111,81,330,	0,33685,35831,37498,
#Deleted in new
chr2	233379842	233379955	chr2:233379842-233379955	3	-	233379842	233379842	8553170	1	113,	0,
#Partially deleted in new
chr2	233385944	233434899	chr2:233385944-233434899	0	+	233385944	233434899	789624	5	66,111,81,105,131,	0,2312,4458,48435,48824,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	233386053	233388985	chr2:233386053-233388985	0	+	233386053	233386053	8553170	2	161,729,	0,2203,
#Partially deleted in new
chr2	233388153	233472096	chr2:233388153-233472096	1	+	233388232	233469460	0	29	214,81,105,133,107,126,103,163,109,140,85,95,100,274,150,129,97,111,97,108,114,135,152,112,93,120,118,131,2726,	0,2249,46226,46615,47664,48162,49223,50063,53733,57469,58558,59933,60122,60949,61828,62768,63810,66609,68745,69067,70130,71603,72040,74194,74489,76010,78932,80269,81217,
#Partially deleted in new
chr2	233408890	233435924	chr2:233408890-233435924	0	+	233408890	233408890	8553170	4	161,105,133,107,	0,25489,25878,26927,
#Partially deleted in new
chr2	233419240	233457817	chr2:233419240-233457817	0	+	233419240	233419240	8553170	19	181,105,133,107,126,103,163,109,140,85,95,100,274,150,129,97,111,97,597,	0,15139,15528,16577,17075,18136,18976,22646,26382,27471,28846,29035,29862,30741,31681,32723,35522,37658,37980,
#Partially deleted in new
chr2	233434466	233442591	chr2:233434466-233442591	0	+	233434466	233434466	8553170	7	18,133,107,126,103,163,705,	0,302,1351,1849,2910,3750,7420,
#Partially deleted in new
chr2	233438312	233472104	chr2:233438312-233472104	0	+	233438312	233454763	789624	23	67,109,140,85,95,100,274,150,129,97,108,111,97,108,114,135,152,112,93,120,118,131,2734,	0,3574,7310,8399,9774,9963,10790,11669,12609,13651,16044,16450,18586,18908,19971,21444,21881,24035,24330,25851,28773,30110,31058,
#Partially deleted in new
chr2	233447700	233449155	chr2:233447700-233449155	0	+	233447700	233447700	8553170	4	205,95,100,53,	0,386,575,1402,
#Partially deleted in new
chr2	233448029	233449172	chr2:233448029-233449172	0	+	233448029	233448029	8553170	3	152,100,70,	0,246,1073,
#Partially deleted in new
chr2	233458238	233459867	chr2:233458238-233459867	0	+	233458238	233458238	8553170	2	159,111,	0,1518,
#Partially deleted in new
chr2	233463813	233467150	chr2:233463813-233467150	0	+	233463813	233463813	8553170	2	470,65,	0,3272,
#Partially deleted in new
chr2	233475519	233565590	chr2:233475519-233565590	3	-	233477391	233565590	789624	31	1984,95,96,211,66,119,95,127,75,65,37,87,89,54,58,124,320,71,85,172,82,301,105,96,129,144,147,165,114,68,235,	0,5683,10011,10247,12719,13845,15647,17905,21238,23028,24359,34529,36189,37049,44094,45471,47650,48972,49958,51887,53911,57959,65142,66748,73581,75856,78860,81335,84291,87216,89836,
#Partially deleted in new
chr2	233475525	233566782	chr2:233475525-233566782	1	-	233477391	233565554	789624	32	1978,95,96,211,66,119,95,127,75,65,37,87,89,54,58,124,320,71,85,172,82,301,105,96,129,144,147,165,114,68,218,99,	0,5677,10005,10241,12713,13839,15641,17899,21232,23022,24353,34523,36183,37043,44088,45465,47644,48966,49952,51881,53905,57953,65136,66742,73575,75850,78854,81329,84285,87210,89830,91158,
#Partially deleted in new
chr2	233475525	233489640	chr2:233475525-233489640	0	-	233475525	233475525	8553170	6	1978,95,96,211,66,276,	0,5677,10005,10241,12713,13839,
#Partially deleted in new
chr2	233477391	233565590	chr2:233477391-233565590	1	-	233477391	233565554	789624	31	112,95,96,211,66,119,95,127,75,65,37,87,89,54,58,124,320,71,85,172,82,301,105,96,129,144,147,165,114,68,235,	0,3811,8139,8375,10847,11973,13775,16033,19366,21156,22487,32657,34317,35177,42222,43599,45778,47100,48086,50015,52039,56087,63270,64876,71709,73984,76988,79463,82419,85344,87964,
#Partially deleted in new
chr2	233481235	233481642	chr2:233481235-233481642	0	-	233481235	233481235	8553170	2	62,123,	0,284,
#Partially deleted in new
chr2	233485540	233493477	chr2:233485540-233493477	0	-	233489379	233493477	789624	7	86,211,66,119,40,95,53,	0,226,2698,3824,5491,5626,7884,
#Partially deleted in new
chr2	233485565	233489869	chr2:233485565-233489869	0	-	233485565	233485565	8553170	5	61,211,66,119,208,	0,201,2673,3799,4096,
#Partially deleted in new
chr2	233485586	233489461	chr2:233485586-233489461	0	-	233485586	233489461	789624	3	40,211,97,	0,180,3778,
#Partially deleted in new
chr2	233485605	233491339	chr2:233485605-233491339	0	-	233485605	233485605	8553170	5	21,211,66,119,173,	0,161,2633,3759,5561,
#Partially deleted in new
chr2	233487680	233511758	chr2:233487680-233511758	0	-	233487987	233511758	789624	10	326,66,119,95,127,75,65,37,87,50,	0,558,1684,3486,5744,9077,10867,12198,22368,24028,
#Partially deleted in new
chr2	233492663	233512502	chr2:233492663-233512502	1	-	233493374	233511759	789624	6	888,75,65,37,87,794,	0,4094,5884,7215,17385,19045,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	233496793	233512892	chr2:233496793-233512892	0	-	233496793	233496793	8553170	6	39,65,37,87,89,324,	0,1754,3085,13255,14915,15775,
#Deleted in new
chr2	233519425	233523252	chr2:233519425-233523252	0	-	233519581	233523252	789624	3	246,124,83,	0,1565,3744,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	233525510	233542616	chr2:233525510-233542616	0	-	233525510	233525510	8553170	5	52,172,82,96,166,	0,1896,3920,16757,16940,
#Deleted in new
chr2	233545481	233547032	chr2:233545481-233547032	7	+	233545481	233545481	16724991	1	1551,	0,
#Partially deleted in new
chr2	233554324	233566710	chr2:233554324-233566710	0	-	233554324	233554324	8553170	6	202,165,114,68,218,27,	0,2530,5486,8411,11031,12359,
#Partially deleted in new
chr2	233556585	233566782	chr2:233556585-233566782	0	-	233556585	233556585	8553170	5	434,114,68,218,99,	0,3225,6150,8770,10098,
#Partially deleted in new
chr2	233560742	233566734	chr2:233560742-233566734	1	-	233561003	233565554	789624	4	291,68,218,51,	0,1993,4613,5941,
#Deleted in new
chr2	233585438	233586291	chr2:233585438-233586291	7	+	233585438	233585438	16724991	1	853,	0,
#Deleted in new
chr2	233603552	233604401	chr2:233603552-233604401	7	+	233603552	233603552	16724991	1	849,	0,
#Partially deleted in new
chr2	233617644	233773310	chr2:233617644-233773310	3	+	233617707	233772559	789624	5	918,132,88,220,1049,	0,149389,150204,150575,154617,
#Partially deleted in new
chr2	233636453	233773305	chr2:233636453-233773305	3	+	233636522	233772559	789624	5	924,132,88,220,1044,	0,130580,131395,131766,135808,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	233636501	233770279	chr2:233636501-233770279	1	+	233636522	233769561	789624	5	876,132,88,220,749,	0,130532,131347,131718,133029,
#Partially deleted in new
chr2	233647925	233649026	chr2:233647925-233649026	7	+	233647925	233647925	16724991	2	516,246,	0,855,
#Partially deleted in new
chr2	233671852	233773300	chr2:233671852-233773300	3	+	233671934	233772559	789624	5	937,132,88,220,1039,	0,95181,95996,96367,100409,
#Partially deleted in new
chr2	233681937	233773299	chr2:233681937-233773299	3	+	233681937	233772559	789624	5	855,132,88,220,1038,	0,85096,85911,86282,90324,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	233682367	233692347	chr2:233682367-233692347	0	+	233682367	233690561	789624	3	425,6,1828,	0,7531,8152,
#Partially deleted in new
chr2	233691606	233772668	chr2:233691606-233772668	1	+	233693805	233772559	789624	6	214,67,132,88,220,407,	0,2192,75427,76242,76613,80655,
#Partially deleted in new
chr2	233691643	233693571	chr2:233691643-233693571	0	+	233693004	233693571	789624	2	177,568,	0,1360,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	233691701	233756351	chr2:233691701-233756351	0	+	233691701	233691701	8553170	3	119,67,1662,	0,2097,62988,
#Partially deleted in new
chr2	233691709	233772341	chr2:233691709-233772341	0	+	233693805	233769561	789624	7	111,67,132,88,220,134,80,	0,2089,75324,76139,76510,77821,80552,
#Partially deleted in new
chr2	233692865	233773300	chr2:233692865-233773300	3	+	233693004	233772559	789624	5	1000,132,88,220,1039,	0,74168,74983,75354,79396,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	233693433	233708699	chr2:233693433-233708699	3	-	233693433	233693433	8553170	2	404,259,	0,15007,
#Partially deleted in new
chr2	233693664	233767159	chr2:233693664-233767159	0	+	233693664	233717795	789624	3	201,240,126,	0,24128,73369,
#Partially deleted in new
chr2	233693684	233729917	chr2:233693684-233729917	0	+	233693684	233693684	8553170	2	181,414,	0,35819,
#Partially deleted in new
chr2	233693691	233769701	chr2:233693691-233769701	1	+	233693805	233769561	789624	5	174,132,88,220,171,	0,73342,74157,74528,75839,
#Partially deleted in new
chr2	233712991	233773299	chr2:233712991-233773299	3	+	233712991	233772559	789624	5	867,132,88,220,1038,	0,54042,54857,55228,59270,
#Partially deleted in new
chr2	233718777	233773299	chr2:233718777-233773299	3	+	233718820	233772559	789624	5	910,132,88,220,1038,	0,48256,49071,49442,53484,
#Partially deleted in new
chr2	233718820	233773006	chr2:233718820-233773006	0	+	233718820	233769561	789624	6	867,132,88,220,134,745,	0,48213,49028,49399,50710,53441,
#Partially deleted in new
chr2	233721521	233722065	chr2:233721521-233722065	7	-	233721521	233721521	16724991	1	544,	0,
#Partially deleted in new
chr2	233729107	233773299	chr2:233729107-233773299	3	+	233729126	233772559	789624	5	886,132,88,220,1038,	0,37926,38741,39112,43154,
#Deleted in new
chr2	233742749	233744015	chr2:233742749-233744015	7	-	233742749	233742749	16724991	1	1266,	0,
#Deleted in new
chr2	233743187	233743916	chr2:233743187-233743916	5	-	233743187	233743187	16724991	1	729,	0,
#Deleted in new
chr2	233747213	233748079	chr2:233747213-233748079	7	+	233747213	233747213	16724991	1	866,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	233750616	233753656	chr2:233750616-233753656	7	+	233750616	233750616	16724991	3	104,199,454,	0,1728,2586,
#Deleted in new
chr2	233754304	233755345	chr2:233754304-233755345	7	-	233754304	233754304	16724991	2	487,202,	0,839,
#Deleted in new
chr2	233754422	233755269	chr2:233754422-233755269	4	-	233754422	233754422	16724991	2	369,263,	0,584,
#Deleted in new
chr2	233754422	233755334	chr2:233754422-233755334	4	-	233754422	233754422	16724991	1	912,	0,
#Deleted in new
chr2	233754541	233755269	chr2:233754541-233755269	5	-	233754541	233754541	16724991	1	728,	0,
#Partially deleted in new
chr2	233760247	233773299	chr2:233760247-233773299	3	+	233760287	233772559	789624	5	904,132,88,220,1038,	0,6786,7601,7972,12014,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	233760287	233771615	chr2:233760287-233771615	1	+	233760287	233769561	789624	5	864,132,88,220,2085,	0,6746,7561,7932,9243,
#Partially deleted in new
chr2	233775678	233833423	chr2:233775678-233833423	3	+	233779358	233833259	789624	42	79,108,182,132,163,99,152,118,128,79,114,77,120,111,148,41,142,53,108,120,123,153,123,80,109,96,105,124,119,153,155,160,209,138,127,150,183,156,132,103,66,286,	0,3666,3992,13818,14173,17117,17994,18684,19939,20288,20521,23095,24101,24526,26489,27769,28372,28816,29325,31744,32054,33447,35115,36201,37991,38903,41102,42323,42973,43638,44223,46445,46684,47202,47877,52951,53211,53941,55730,56498,56900,57459,
#Partially deleted in new
chr2	233775723	233779782	chr2:233775723-233779782	0	+	233779358	233779782	789624	3	34,106,112,	0,3623,3947,
#Partially deleted in new
chr2	233775723	233779782	chr2:233775723-233779782	0	+	233779358	233779782	789624	3	34,108,112,	0,3621,3947,
#Partially deleted in new
chr2	233775723	233779782	chr2:233775723-233779782	0	+	233779753	233779782	789624	2	34,112,	0,3947,
#Partially deleted in new
chr2	233778329	233833423	chr2:233778329-233833423	1	+	233779358	233833259	789624	42	152,108,182,132,163,99,152,144,93,79,114,77,120,111,148,41,142,53,108,120,123,153,123,80,109,96,105,124,119,153,155,160,194,138,109,150,183,156,132,103,66,286,	0,1015,1341,11167,11522,14466,15343,16033,17323,17637,17870,20444,21450,21875,23838,25118,25721,26165,26674,29093,29403,30796,32464,33550,35340,36252,38451,39672,40322,40987,41572,43794,44033,44551,45226,50300,50560,51290,53079,53847,54249,54808,
#Partially deleted in new
chr2	233779670	233793817	chr2:233779670-233793817	0	+	233779670	233779670	8553170	2	182,145,	0,14002,
#Partially deleted in new
chr2	233796287	233802468	chr2:233796287-233802468	0	+	233796287	233796287	8553170	5	26,77,120,111,301,	0,2486,3492,3917,5880,
#Partially deleted in new
chr2	233828554	233833418	chr2:233828554-233833418	0	+	233828554	233828554	8553170	7	225,183,156,132,103,66,281,	0,335,1065,2854,3622,4024,4583,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	233833415	233840738	chr2:233833415-233840738	0	-	233837576	233840738	789624	3	317,376,130,	0,3861,7193,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	233836700	233854566	chr2:233836700-233854566	1	-	233837576	233854500	0	7	952,1597,79,93,56,67,183,	0,3908,7504,9027,15864,17143,17683,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	233836700	233854566	chr2:233836700-233854566	1	-	233837576	233854500	0	6	952,1597,79,56,67,183,	0,3908,7504,15864,17143,17683,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	233836702	233854566	chr2:233836702-233854566	3	-	233837576	233854500	0	9	950,1597,79,93,65,97,56,67,183,	0,3906,7502,9025,10694,13060,15862,17141,17681,
#Partially deleted in new
chr2	233840814	233854566	chr2:233840814-233854566	0	-	233840814	233854500	789624	5	1391,79,56,67,183,	0,3390,11750,13029,13569,
#Partially deleted in new
chr2	233841850	233854474	chr2:233841850-233854474	0	-	233841850	233854474	789624	7	355,79,93,65,56,67,91,	0,2354,3877,5546,10714,11993,12533,
#Partially deleted in new
chr2	233841892	233845799	chr2:233841892-233845799	0	-	233841892	233841892	8553170	2	313,72,	0,3835,
#Partially deleted in new
chr2	233842115	233854535	chr2:233842115-233854535	0	-	233845788	233854500	789624	7	90,79,93,97,56,67,152,	0,2089,3612,7647,10449,11728,12268,
#Partially deleted in new
chr2	233844224	233846135	chr2:233844224-233846135	0	-	233844224	233844224	8553170	2	59,408,	0,1503,
#Partially deleted in new
chr2	233865436	233868444	chr2:233865436-233868444	7	-	233865436	233865436	16724991	2	1914,118,	0,2890,
#Deleted in new
chr2	233865495	233867359	chr2:233865495-233867359	3	-	233865495	233865495	8553170	1	1864,	0,
#Partially deleted in new
chr2	233866128	233868230	chr2:233866128-233868230	5	-	233866128	233866128	16724991	2	1324,144,	0,1958,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr2	233917397	234019522	chr2:233917397-234019522	3	+	233926537	234014612	789624	26	35,122,74,157,178,173,175,68,198,103,119,291,96,130,146,113,217,92,142,172,178,191,100,34,93,2224,	0,9135,13270,19955,21600,25178,28458,29690,32551,36519,37734,43378,45884,47230,49212,52297,52812,62790,64376,65655,68290,78928,89455,90672,97164,99901,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr2	233917397	234019522	chr2:233917397-234019522	1	+	233945879	234014612	789624	24	35,122,74,157,178,173,175,68,198,103,119,291,96,130,146,92,142,172,178,191,100,34,93,2224,	0,9135,13270,19955,21600,25178,28458,29690,32551,36519,37734,43378,45884,47230,49212,62790,64376,65655,68290,78928,89455,90672,97164,99901,
#Partially deleted in new
chr2	233917404	234017329	chr2:233917404-234017329	0	+	233926537	233947361	789624	25	28,122,74,157,178,173,175,68,257,198,103,119,291,96,130,146,92,142,172,178,191,100,34,93,31,	0,9128,13263,19948,21593,25171,28451,29683,29921,32544,36512,37727,43371,45877,47223,49205,62783,64369,65648,68283,78921,89448,90665,97157,99894,
#Partially deleted in new
chr2	233929715	233942989	chr2:233929715-233942989	1	+	233937311	233942778	789624	5	35,74,203,178,414,	0,952,7591,9282,12860,
#Partially deleted in new
chr2	233929741	233942879	chr2:233929741-233942879	1	+	233937392	233942778	789624	5	9,74,157,178,304,	0,926,7611,9256,12834,
#Partially deleted in new
chr2	233933739	233937450	chr2:233933739-233937450	0	+	233933739	233933739	8553170	2	217,98,	0,3613,
#Partially deleted in new
chr2	233946145	233955435	chr2:233946145-233955435	3	-	233946145	233946145	8553170	2	194,400,	0,8890,
#Partially deleted in new
chr2	233953708	233960924	chr2:233953708-233960924	0	+	233953708	233953708	8553170	3	311,119,149,	0,1423,7067,
#Partially deleted in new
chr2	233966617	234017843	chr2:233966617-234017843	0	+	233966617	234017382	789624	9	138,92,142,172,178,191,100,34,545,	0,13570,15156,16435,19070,29708,40235,41452,50681,
#Partially deleted in new
chr2	233966634	233969912	chr2:233966634-233969912	0	+	233966634	233966634	8553170	2	121,218,	0,3060,
#Partially deleted in new
chr2	233968161	233996516	chr2:233968161-233996516	0	+	233968161	233968161	8553170	4	126,172,178,191,	0,14891,17526,28164,
#Partially deleted in new
chr2	233980121	233985795	chr2:233980121-233985795	0	+	233980121	233980121	8553170	4	158,142,172,108,	0,1652,2931,5566,
#Partially deleted in new
chr2	233981807	234018438	chr2:233981807-234018438	0	+	233981807	233985700	789624	8	108,299,178,191,100,34,93,1140,	0,1245,3880,14518,25045,26262,32754,35491,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	234013224	234014687	chr2:234013224-234014687	0	+	234013224	234013224	8553170	2	562,126,	0,1337,
#Partially deleted in new
chr2	234050678	234077130	chr2:234050678-234077130	3	+	234050786	234070013	789624	8	193,125,123,111,55,51,96,106,	0,292,8157,9690,15854,16545,19249,26346,
#Partially deleted in new
chr2	234050698	234077134	chr2:234050698-234077134	1	+	234050786	234070013	789624	8	173,125,123,111,55,51,96,290,	0,272,8137,9670,15834,16525,19229,26146,
#Partially deleted in new
chr2	234050786	234070010	chr2:234050786-234070010	0	+	234058865	234070010	789624	6	85,123,111,55,51,83,	0,8049,9582,15746,16437,19141,
#Partially deleted in new
chr2	234050836	234056278	chr2:234050836-234056278	0	+	234050836	234050836	8553170	3	35,125,221,	0,134,5221,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	234082258	234084490	chr2:234082258-234084490	3	+	234082258	234082258	8553170	1	2232,	0,
#Partially deleted in new
chr2	234109080	234109481	chr2:234109080-234109481	3	+	234109080	234109080	8553170	2	129,158,	0,243,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	234222837	234223941	chr2:234222837-234223941	1	+	234222837	234222837	8553170	1	1104,	0,
#Deleted in new
chr2	234223313	234224514	chr2:234223313-234224514	3	+	234223313	234223313	8553170	1	1201,	0,
#Deleted in new
chr2	234329482	234329838	chr2:234329482-234329838	7	+	234329482	234329482	16724991	1	356,	0,
#Partially deleted in new
chr2	234438327	234462127	chr2:234438327-234462127	3	+	234438327	234438327	8553170	3	188,113,261,	0,22250,23539,
#Partially deleted in new
chr2	234444589	234454595	chr2:234444589-234454595	3	-	234444589	234444589	789624	3	146,281,111,	0,5528,9895,
#Partially deleted in new
chr2	234455156	234455783	chr2:234455156-234455783	7	-	234455156	234455156	16724991	2	31,280,	0,347,
#Deleted in new
chr2	234493040	234496600	chr2:234493040-234496600	1	-	234495805	234496586	789624	2	2796,589,	0,2971,
#Deleted in new
chr2	234493040	234497053	chr2:234493040-234497053	3	-	234496007	234496586	789624	1	4013,	0,
#Partially deleted in new
chr2	234682667	234717764	chr2:234682667-234717764	3	+	234682667	234682667	789624	3	101,100,130,	0,12981,34967,
#Partially deleted in new
chr2	234743541	234745606	chr2:234743541-234745606	7	-	234743541	234743541	16724991	2	846,902,	0,1163,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	234882278	234888802	chr2:234882278-234888802	1	-	234882278	234882278	8553170	4	1200,257,41,154,	0,2421,5498,6370,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	234887368	234888526	chr2:234887368-234888526	0	-	234887368	234887368	8553170	2	449,247,	0,911,
#Partially deleted in new
chr2	234951972	235055714	chr2:234951972-235055714	3	+	235035002	235053816	789624	6	198,74,250,2360,189,2123,	0,43330,82898,88915,100589,101619,
#Deleted in new
chr2	234952034	234953190	chr2:234952034-234953190	0	+	234952034	234952034	8553170	2	136,476,	0,680,
#Partially deleted in new
chr2	234952075	235041135	chr2:234952075-235041135	0	+	235035002	235041135	789624	3	95,250,248,	0,82795,88812,
#Partially deleted in new
chr2	234978684	235055648	chr2:234978684-235055648	1	+	235035002	235053816	789624	6	301,74,250,2360,189,2057,	0,16618,56186,62203,73877,74907,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	234978699	234979898	chr2:234978699-234979898	0	+	234978699	234978699	8553170	2	201,437,	0,762,
#Partially deleted in new
chr2	234978702	235055648	chr2:234978702-235055648	1	+	235035002	235053816	789624	6	198,74,166,2360,189,2057,	0,16600,56252,62185,73859,74889,
#Partially deleted in new
chr2	234978704	235040937	chr2:234978704-235040937	0	+	235035002	235040937	789624	4	196,74,250,50,	0,16598,56166,62183,
#Partially deleted in new
chr2	234981623	235041288	chr2:234981623-235041288	0	+	235035002	235041288	789624	4	104,74,250,401,	0,13679,53247,59264,
#Partially deleted in new
chr2	234981633	235008594	chr2:234981633-235008594	0	+	234981633	234981633	8553170	4	94,54,74,35,	0,1609,13669,26926,
#Deleted in new
chr2	234994523	234995993	chr2:234994523-234995993	0	+	234994523	234994523	8553170	3	105,74,302,	0,779,1168,
#Partially deleted in new
chr2	234994839	235040942	chr2:234994839-235040942	0	+	235035002	235040942	789624	4	121,74,250,55,	0,463,40031,46048,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	235084821	235088586	chr2:235084821-235088586	3	-	235084821	235084821	8553170	3	474,93,124,	0,778,3641,
#Deleted in new
chr2	235147015	235147500	chr2:235147015-235147500	7	-	235147015	235147015	16724991	1	485,	0,
#Deleted in new
chr2	235177895	235178905	chr2:235177895-235178905	3	+	235177895	235177895	8553170	2	170,493,	0,517,
#Partially deleted in new
chr2	235494088	235853202	chr2:235494088-235853202	1	+	235494686	235852853	789624	10	761,59,88,86,142,135,128,156,93,517,	0,215090,223468,246874,250609,256265,303670,305278,313150,358597,
#Partially deleted in new
chr2	235494106	236131800	chr2:235494106-236131800	1	+	235494686	236124122	789624	18	743,59,88,86,142,135,128,156,93,105,169,159,162,155,91,223,256,7882,	0,215072,223450,246856,250591,256247,303652,305260,313132,389238,414631,436658,474355,542454,546644,554952,626085,629812,
#Partially deleted in new
chr2	235494106	236126554	chr2:235494106-236126554	3	+	235494686	236124122	789624	17	743,59,88,86,142,135,128,156,93,105,169,162,155,91,223,256,2636,	0,215072,223450,246856,250591,256247,303652,305260,313132,389238,414631,474355,542454,546644,554952,626085,629812,
#Partially deleted in new
chr2	235494701	236124199	chr2:235494701-236124199	0	+	235494701	235740993	789624	18	148,59,77,12,86,142,135,128,156,93,105,169,162,155,91,223,256,281,	0,214477,222855,223679,246261,249996,255652,303057,304665,312537,388643,414036,473760,541859,546049,554357,625490,629217,
#Partially deleted in new
chr2	235505750	235507566	chr2:235505750-235507566	3	+	235505750	235505750	789624	2	50,614,	0,1202,
#Partially deleted in new
chr2	235524323	235744811	chr2:235524323-235744811	0	+	235524535	235744811	789624	5	216,59,88,86,114,	0,184855,193233,216639,220374,
#Partially deleted in new
chr2	235669603	236126554	chr2:235669603-236126554	1	+	235670099	236124122	789624	17	1454,59,88,86,142,135,128,156,93,105,169,162,155,91,223,256,2636,	0,39575,47953,71359,75094,80750,128155,129763,137635,213741,239134,298858,366957,371147,379455,450588,454315,
#Partially deleted in new
chr2	235709176	236131800	chr2:235709176-236131800	1	+	235709177	236124122	789624	16	61,88,86,142,135,128,156,93,105,169,162,155,91,223,256,7882,	0,8380,31786,35521,41177,88582,90190,98062,174168,199561,259285,327384,331574,339882,411015,414742,
#Partially deleted in new
chr2	235709176	235852853	chr2:235709176-235852853	1	+	235709177	235852853	789624	9	61,88,86,142,135,128,156,93,168,	0,8380,31786,35521,41177,88582,90190,98062,143509,
#Partially deleted in new
chr2	235709177	236131800	chr2:235709177-236131800	1	+	235709177	236124122	789624	17	60,88,86,142,135,128,156,93,105,169,159,162,155,91,223,256,7882,	0,8379,31785,35520,41176,88581,90189,98061,174167,199560,221587,259284,327383,331573,339881,411014,414741,
#Deleted in new
chr2	235773854	235775794	chr2:235773854-235775794	1	-	235773854	235773854	8553170	3	128,175,138,	0,448,1802,
#Partially deleted in new
chr2	235773854	235783387	chr2:235773854-235783387	3	-	235773854	235773854	8553170	3	128,85,74,	0,3102,9459,
#Deleted in new
chr2	235882361	235882493	chr2:235882361-235882493	7	-	235882361	235882361	16724991	1	132,	0,
#Partially deleted in new
chr2	235883394	236036697	chr2:235883394-236036697	0	+	235883394	236036697	789624	6	55,169,159,162,75,137,	0,25343,47370,85067,131410,153166,
#Partially deleted in new
chr2	235908841	236120246	chr2:235908841-236120246	0	+	235908841	236120246	789624	7	65,162,75,155,91,223,55,	0,59620,105963,127719,131909,140217,211350,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	236037249	236037311	chr2:236037249-236037311	3	+	236037249	236037249	8553170	1	62,	0,
#Partially deleted in new
chr2	236040611	236120279	chr2:236040611-236120279	0	+	236040611	236040611	8553170	3	230,223,88,	0,8447,79580,
#Partially deleted in new
chr2	236040750	236049831	chr2:236040750-236049831	0	+	236040750	236040750	8553170	2	91,773,	0,8308,
#Partially deleted in new
chr2	236045936	236125482	chr2:236045936-236125482	0	+	236045936	236045936	8553170	4	95,223,256,1564,	0,3122,74255,77982,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	236072294	236072556	chr2:236072294-236072556	3	+	236072294	236072294	8553170	1	262,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	236153070	236153172	chr2:236153070-236153172	3	-	236153070	236153070	8553170	1	102,	0,
#Deleted in new
chr2	236165235	236168369	chr2:236165235-236168369	3	-	236165913	236167971	789624	2	1202,921,	0,2213,
#Deleted in new
chr2	236165728	236168009	chr2:236165728-236168009	1	-	236166328	236167971	789624	3	709,37,561,	0,1409,1720,
#Deleted in new
chr2	236165733	236167329	chr2:236165733-236167329	0	-	236165733	236165733	8553170	2	704,192,	0,1404,
#Partially deleted in new
chr2	236167446	236294927	chr2:236167446-236294927	1	+	236167446	236167446	8553170	4	223,93,81,155,	0,92060,109925,127326,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	236167464	236214225	chr2:236167464-236214225	3	+	236167464	236167464	8553170	2	205,563,	0,46198,
#Partially deleted in new
chr2	236194871	236264345	chr2:236194871-236264345	3	-	236194871	236264345	789624	6	186,114,505,268,123,205,	0,1400,19490,42817,46408,69269,
#Partially deleted in new
chr2	236194871	236241520	chr2:236194871-236241520	1	-	236194871	236241520	789624	5	186,114,505,268,241,	0,1400,19490,42817,46408,
#Partially deleted in new
chr2	236196057	236214601	chr2:236196057-236214601	0	-	236196178	236214601	789624	2	328,240,	0,18304,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	236210372	236210548	chr2:236210372-236210548	3	-	236210372	236210372	8553170	1	176,	0,
#Partially deleted in new
chr2	236214753	236264409	chr2:236214753-236264409	0	-	236214753	236264345	789624	3	113,268,269,	0,22935,49387,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	236247328	236264360	chr2:236247328-236264360	0	-	236247328	236247328	8553170	2	3407,220,	0,16812,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	236250540	236254171	chr2:236250540-236254171	0	-	236250540	236250540	8553170	2	195,350,	0,3281,
#Partially deleted in new
chr2	236324146	236507535	chr2:236324146-236507535	1	-	236324687	236507267	789624	18	637,239,178,87,200,108,83,65,96,107,76,85,206,72,192,120,325,279,	0,7212,14058,20410,39633,44047,52956,56422,67829,68097,75266,116893,141358,162682,163853,169621,173016,183110,
#Partially deleted in new
chr2	236324146	236503697	chr2:236324146-236503697	1	-	236324687	236503662	789624	19	637,239,178,87,200,108,83,68,96,107,76,123,85,206,72,192,120,325,67,	0,7212,14058,20410,39633,44047,52956,56422,67829,68097,75266,95002,116893,141358,162682,163853,169621,173016,179484,
#Partially deleted in new
chr2	236324150	236507532	chr2:236324150-236507532	0	-	236338363	236507267	789624	20	633,239,178,62,87,200,108,83,68,96,107,76,123,85,206,72,192,120,325,276,	0,7208,14054,19551,20406,39629,44043,52952,56418,67825,68093,75262,94998,116889,141354,162678,163849,169617,173012,183106,
#Partially deleted in new
chr2	236324150	236507542	chr2:236324150-236507542	3	-	236324687	236507267	789624	19	633,239,178,87,200,108,83,65,96,107,76,123,85,206,72,192,120,325,286,	0,7208,14054,20406,39629,44043,52952,56418,67825,68093,75262,94998,116889,141354,162678,163849,169617,173012,183106,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	236324652	236346751	chr2:236324652-236346751	0	-	236324652	236324652	8553170	5	131,239,178,87,66,	0,6706,13552,19904,22033,
#Partially deleted in new
chr2	236324670	236333363	chr2:236324670-236333363	0	-	236324670	236324670	8553170	2	113,2005,	0,6688,
#Partially deleted in new
chr2	236324690	236332056	chr2:236324690-236332056	0	-	236324690	236324690	8553170	2	93,698,	0,6668,
#Deleted in new
chr2	236367559	236369102	chr2:236367559-236369102	3	+	236367559	236367559	8553170	1	1543,	0,
#Partially deleted in new
chr2	236377115	236503696	chr2:236377115-236503696	0	-	236377115	236503696	789624	13	70,68,96,107,76,123,85,206,72,192,120,325,66,	0,3453,14860,15128,22297,42033,63924,88389,109713,110884,116652,120047,126515,
#Partially deleted in new
chr2	236380612	236412891	chr2:236380612-236412891	0	-	236380612	236380612	8553170	5	21,96,107,76,296,	0,11363,11631,18800,31983,
#Deleted in new
chr2	236391073	236392388	chr2:236391073-236392388	3	+	236391073	236391073	8553170	2	395,94,	0,1221,
#Partially deleted in new
chr2	236392328	236455111	chr2:236392328-236455111	0	-	236392328	236392328	8553170	5	22,76,123,85,430,	0,7084,26820,48711,62353,
#Deleted in new
chr2	236407845	236409077	chr2:236407845-236409077	7	-	236407845	236407845	16724991	1	1232,	0,
#Deleted in new
chr2	236567786	236581097	chr2:236567786-236581097	0	+	236580465	236581097	789624	2	55,658,	0,12653,
#Deleted in new
chr2	236569640	236582358	chr2:236569640-236582358	3	+	236580465	236581554	789624	2	284,1919,	0,10799,
#Partially deleted in new
chr2	236733381	236752806	chr2:236733381-236752806	3	+	236733381	236733381	8553170	3	201,42,318,	0,14987,19107,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	236752773	236754363	chr2:236752773-236754363	1	+	236752773	236752773	8553170	2	58,822,	0,768,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	237015203	237015305	chr2:237015203-237015305	3	-	237015203	237015203	8553170	1	102,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	237048598	237056167	chr2:237048598-237056167	3	-	237048598	237048598	789624	7	368,769,368,145,122,338,121,	0,813,2344,5748,6401,6790,7448,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	237059433	237085817	chr2:237059433-237085817	3	-	237059433	237059433	8553170	2	679,1662,	0,24722,
#Partially deleted in new
chr2	237085311	237100466	chr2:237085311-237100466	3	+	237085964	237097742	0	8	731,71,49,133,108,63,48,2804,	0,1815,3293,4550,8778,10510,11510,12351,
#Partially deleted in new
chr2	237085881	237098618	chr2:237085881-237098618	1	+	237087195	237097742	0	9	161,65,71,49,133,108,63,48,956,	0,850,1245,2723,3980,8208,9940,10940,11781,
#Partially deleted in new
chr2	237085883	237097933	chr2:237085883-237097933	1	+	237085964	237097742	789624	7	159,71,49,133,63,48,271,	0,1243,2721,3978,9938,10938,11779,
#Partially deleted in new
chr2	237085885	237095881	chr2:237085885-237095881	0	+	237085885	237085885	8553170	6	157,71,49,133,535,60,	0,1241,2719,3976,7777,9936,
#Partially deleted in new
chr2	237085908	237094186	chr2:237085908-237094186	0	+	237085964	237087509	789624	6	134,71,100,49,133,97,	0,1218,1555,2696,3953,8181,
#Partially deleted in new
chr2	237094138	237099143	chr2:237094138-237099143	0	+	237094138	237097742	789624	5	59,63,48,140,186,	0,1683,2683,3524,4819,
#Deleted in new
chr2	237096677	237098160	chr2:237096677-237098160	0	+	237096677	237096677	8553170	2	192,498,	0,985,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	237122909	237124097	chr2:237122909-237124097	3	-	237122909	237122909	8553170	2	624,45,	0,1143,
#Partially deleted in new
chr2	237257090	237257676	chr2:237257090-237257676	3	+	237257090	237257090	8553170	2	103,247,	0,339,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	237324002	237330180	chr2:237324002-237330180	0	-	237324002	237324002	8553170	2	812,4621,	0,1557,
#Partially deleted in new
chr2	237324011	237414375	chr2:237324011-237414375	3	-	237324773	237396817	0	44	803,165,99,264,398,103,699,97,494,12,37,33,63,63,36,51,63,63,63,63,36,54,66,63,54,45,27,72,54,93,146,79,338,600,615,606,609,573,600,585,603,618,121,423,	0,1548,9438,10614,12123,15003,16440,18053,20338,20929,21046,21169,22491,23795,24337,24601,26135,27118,28510,29329,30887,33326,33805,34509,35023,35194,35350,36076,37109,37727,39241,40338,41686,42675,44551,47720,50400,52760,54624,56903,63570,70575,72715,89941,
#Partially deleted in new
chr2	237324011	237414207	chr2:237324011-237414207	1	-	237324773	237396817	0	43	803,165,99,264,398,103,699,97,494,12,37,33,63,63,36,51,63,63,63,63,36,54,66,63,54,45,27,72,54,93,146,79,338,600,615,606,609,573,600,585,603,121,255,	0,1548,9438,10614,12123,15003,16440,18053,20338,20929,21046,21169,22491,23795,24337,24601,26135,27118,28510,29329,30887,33326,33805,34509,35023,35194,35350,36076,37109,37727,39241,40338,41686,42675,44551,47720,50400,52760,54624,56903,63570,72715,89941,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr2	237324018	237355779	chr2:237324018-237355779	0	-	237324018	237324018	8553170	20	796,165,99,264,398,103,699,2779,12,37,33,63,63,36,51,63,63,63,63,881,	0,1541,9431,10607,12116,14996,16433,18046,20922,21039,21162,22484,23788,24330,24594,26128,27111,28503,29322,30880,
#Partially deleted in new
chr2	237324084	237414148	chr2:237324084-237414148	1	-	237324773	237396817	789624	41	730,165,99,264,398,103,699,97,495,8,37,33,63,63,36,51,63,63,63,63,36,54,66,63,54,45,27,72,54,93,146,79,338,600,615,606,609,573,585,121,196,	0,1475,9365,10541,12050,14930,16367,17980,20265,20761,20973,21096,22418,23722,24264,24528,26062,27045,28437,29256,30814,33253,33732,34436,34950,35121,35277,36003,37036,37654,39168,40265,41613,42602,44478,47647,50327,52687,56830,72642,89868,
#Partially deleted in new
chr2	237324084	237414148	chr2:237324084-237414148	1	-	237324773	237396817	0	41	730,165,99,264,398,103,699,97,494,12,37,33,63,63,36,51,63,63,63,63,36,54,66,63,54,45,27,72,54,93,146,79,338,600,615,606,609,573,585,121,196,	0,1475,9365,10541,12050,14930,16367,17980,20265,20856,20973,21096,22418,23722,24264,24528,26062,27045,28437,29256,30814,33253,33732,34436,34950,35121,35277,36003,37036,37654,39168,40265,41613,42602,44478,47647,50327,52687,56830,72642,89868,
#Partially deleted in new
chr2	237324773	237396817	chr2:237324773-237396817	1	-	237324773	237396817	0	42	41,165,99,264,398,103,699,97,494,12,37,33,63,63,36,51,63,63,63,63,36,54,66,63,54,45,27,72,54,93,146,79,338,600,615,606,609,573,600,585,603,91,	0,786,8676,9852,11361,14241,15678,17291,19576,20167,20284,20407,21729,23033,23575,23839,25373,26356,27748,28567,30125,32564,33043,33747,34261,34432,34588,35314,36347,36965,38479,39576,40924,41913,43789,46958,49638,51998,53862,56141,62808,71953,
#Deleted in new
chr2	237332967	237334786	chr2:237332967-237334786	0	-	237332967	237332967	8553170	2	581,161,	0,1658,
#Partially deleted in new
chr2	237338939	237340602	chr2:237338939-237340602	0	-	237338939	237338939	8553170	2	178,151,	0,1512,
#Deleted in new
chr2	237356789	237357883	chr2:237356789-237357883	0	-	237356789	237356789	8553170	2	602,67,	0,1027,
#Partially deleted in new
chr2	237371616	237414207	chr2:237371616-237414207	1	-	237371684	237396817	0	7	721,609,573,600,585,121,255,	0,2795,5155,7019,9298,25110,42336,
#Partially deleted in new
chr2	237371616	237414177	chr2:237371616-237414177	1	-	237371684	237396817	0	8	721,609,573,600,585,603,121,225,	0,2795,5155,7019,9298,15965,25110,42336,
#Partially deleted in new
chr2	237377117	237414177	chr2:237377117-237414177	0	-	237377117	237396817	789624	6	227,585,603,618,121,225,	0,3797,10464,17469,19609,36835,
#Deleted in new
chr2	237386453	237388077	chr2:237386453-237388077	0	-	237386583	237388077	789624	2	156,496,	0,1128,
#Partially deleted in new
chr2	237421419	237425276	chr2:237421419-237425276	3	-	237421419	237421419	8553170	3	421,109,58,	0,705,3799,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	237428919	237434822	chr2:237428919-237434822	3	-	237428919	237428919	8553170	3	279,96,166,	0,4141,5737,
#Partially deleted in new
chr2	237485427	237511050	chr2:237485427-237511050	0	+	237493426	237511050	789624	6	243,43,40,134,222,62,	0,839,1970,7975,25146,25561,
#Partially deleted in new
chr2	237486408	237510674	chr2:237486408-237510674	0	+	237493426	237510674	789624	3	330,134,101,	0,6994,24165,
#Partially deleted in new
chr2	237486409	237553996	chr2:237486409-237553996	1	+	237493426	237553592	789624	14	329,40,134,222,113,110,120,186,156,93,78,58,101,431,	0,988,6993,24164,24579,32129,33500,53938,54392,56157,60196,62811,65927,67156,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	237487167	237555318	chr2:237487167-237555318	3	+	237493426	237553592	789624	16	270,134,222,113,110,120,205,140,84,186,156,93,78,58,101,1753,	0,6235,23406,23821,31371,32742,38433,40209,47396,53180,53634,55399,59438,62053,65169,66398,
#Partially deleted in new
chr2	237487250	237553994	chr2:237487250-237553994	1	+	237493426	237553592	789624	15	187,134,222,113,110,120,205,140,186,156,93,78,58,101,429,	0,6152,23323,23738,31288,32659,38350,40126,53097,53551,55316,59355,61970,65086,66315,
#Partially deleted in new
chr2	237487250	237545769	chr2:237487250-237545769	0	+	237487250	237487250	8553170	12	187,134,222,113,110,120,205,140,186,156,93,313,	0,6152,23323,23738,31288,32659,38350,40126,53097,53551,55316,58206,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	237487250	237510711	chr2:237487250-237510711	0	+	237487250	237487250	8553170	4	187,134,137,138,	0,6152,19998,23323,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	237487274	237511622	chr2:237487274-237511622	0	+	237487274	237487274	8553170	4	163,134,222,634,	0,6128,23299,23714,
#Partially deleted in new
chr2	237487275	237553994	chr2:237487275-237553994	1	+	237493426	237553592	789624	13	162,134,222,113,110,205,140,186,93,78,58,101,429,	0,6127,23298,23713,31263,38325,40101,53072,55291,59330,61945,65061,66290,
#Partially deleted in new
chr2	237510069	237518572	chr2:237510069-237518572	0	+	237510069	237510069	8553170	4	212,222,113,34,	0,504,919,8469,
#Partially deleted in new
chr2	237510086	237553993	chr2:237510086-237553993	0	+	237510086	237510086	8553170	12	709,113,110,120,205,140,186,93,78,58,101,428,	0,902,8452,9823,15514,17290,30261,32480,36519,39134,42250,43479,
#Deleted in new
chr2	237510930	237510988	chr2:237510930-237510988	3	+	237510930	237510930	5263520	1	58,	0,
#Partially deleted in new
chr2	237518028	237553991	chr2:237518028-237553991	0	+	237518028	237518028	8553170	11	620,120,205,140,186,156,93,78,58,101,426,	0,1881,7572,9348,22319,22773,24538,28577,31192,34308,35537,
#Partially deleted in new
chr2	237518294	237552437	chr2:237518294-237552437	0	+	237518294	237518294	8553170	9	354,205,140,186,156,93,78,58,101,	0,7306,9082,22053,22507,24272,28311,30926,34042,
#Partially deleted in new
chr2	237518413	237540446	chr2:237518413-237540446	0	+	237518413	237518413	8553170	6	235,120,205,140,84,99,	0,1496,7187,8963,16150,21934,
#Partially deleted in new
chr2	237519934	237553956	chr2:237519934-237553956	0	+	237519934	237553592	789624	10	95,205,84,186,156,93,78,58,101,391,	0,5666,14629,20413,20867,22632,26671,29286,32402,33631,
#Partially deleted in new
chr2	237519978	237537725	chr2:237519978-237537725	0	+	237519978	237519978	8553170	5	51,205,140,84,227,	0,5622,7398,14585,17520,
#Partially deleted in new
chr2	237525673	237527683	chr2:237525673-237527683	0	+	237525673	237525673	8553170	2	132,307,	0,1703,
#Partially deleted in new
chr2	237525727	237540959	chr2:237525727-237540959	0	+	237525727	237540959	789624	4	78,188,186,158,	0,1601,14620,15074,
#Partially deleted in new
chr2	237527434	237553724	chr2:237527434-237553724	0	+	237527434	237553592	789624	8	82,84,186,93,78,58,101,159,	0,7129,12913,15132,19171,21786,24902,26131,
#Partially deleted in new
chr2	237540864	237553991	chr2:237540864-237553991	0	+	237540864	237553703	789624	6	93,93,78,58,101,303,	0,1702,5741,8356,11472,12824,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	237546404	237553843	chr2:237546404-237553843	0	+	237546404	237546404	8553170	4	279,58,101,278,	0,2816,5932,7161,
#Partially deleted in new
chr2	237552026	237553811	chr2:237552026-237553811	0	+	237552026	237552026	8553170	2	411,246,	0,1539,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	237563164	237563270	chr2:237563164-237563270	3	+	237563164	237563164	8553170	1	106,	0,
#Deleted in new
chr2	237566573	237567175	chr2:237566573-237567175	3	+	237566573	237567175	789624	2	100,164,	0,438,
#Partially deleted in new
chr2	237574321	237591093	chr2:237574321-237591093	3	-	237575018	237586154	789624	6	807,94,126,152,160,627,	0,1065,2935,3682,11676,16145,
#Partially deleted in new
chr2	237574321	237591071	chr2:237574321-237591071	0	-	237577380	237586154	789624	5	807,94,126,160,605,	0,1065,2935,11676,16145,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	237574325	237579570	chr2:237574325-237579570	0	-	237574325	237574325	8553170	3	803,94,2314,	0,1061,2931,
#Partially deleted in new
chr2	237574326	237590660	chr2:237574326-237590660	1	-	237574433	237586154	789624	3	260,12,194,	0,11819,16140,
#Partially deleted in new
chr2	237574354	237590715	chr2:237574354-237590715	0	-	237578103	237586154	789624	6	774,94,126,152,116,249,	0,1032,2902,3649,11687,16112,
#Deleted in new
chr2	237574689	237575884	chr2:237574689-237575884	0	-	237574689	237574689	8553170	2	439,498,	0,697,
#Partially deleted in new
chr2	237574737	237590780	chr2:237574737-237590780	1	-	237575018	237577310	789624	5	391,94,126,152,314,	0,649,2519,3266,15729,
#Partially deleted in new
chr2	237575457	237590734	chr2:237575457-237590734	0	-	237575457	237586154	789624	5	23,126,152,94,268,	0,1799,2546,10606,15009,
#Partially deleted in new
chr2	237576583	237586099	chr2:237576583-237586099	0	-	237576583	237586099	789624	4	107,126,152,36,	0,673,1420,9480,
#Partially deleted in new
chr2	237585402	237590731	chr2:237585402-237590731	0	-	237585402	237585402	8553170	3	162,160,265,	0,595,5064,
#Partially deleted in new
chr2	237590524	237601614	chr2:237590524-237601614	0	-	237590524	237590524	8553170	2	450,108,	0,10982,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	237591019	237592006	chr2:237591019-237592006	0	+	237591019	237591019	8553170	3	248,206,135,	0,546,852,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	237591168	237595981	chr2:237591168-237595981	3	+	237591168	237591168	8553170	3	99,160,1042,	0,703,3771,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	237612976	237626525	chr2:237612976-237626525	3	+	237612976	237612976	8553170	2	277,1780,	0,11769,
#Partially deleted in new
chr2	237627575	237780315	chr2:237627575-237780315	1	+	237627644	237779532	0	24	165,87,18,48,45,51,39,60,45,66,78,36,126,72,171,93,93,93,142,50,118,80,105,894,	0,80968,86683,90186,91947,93196,95972,100300,106198,107692,111656,120788,121623,123624,125733,128519,129880,131153,132488,142367,144505,145290,146782,151846,
#Partially deleted in new
chr2	237627606	237722131	chr2:237627606-237722131	0	+	237627606	237627606	8553170	4	134,87,45,1360,	0,80937,91916,93165,
#Partially deleted in new
chr2	237683403	237756175	chr2:237683403-237756175	0	+	237683403	237683403	8553170	6	92,87,36,126,171,81,	0,25140,64960,65795,69905,72691,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	237692144	237765279	chr2:237692144-237765279	1	+	237692455	237764140	0	8	377,87,36,126,171,93,142,2677,	0,16399,56219,57054,61164,63950,67919,70458,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	237692215	237765915	chr2:237692215-237765915	3	+	237692455	237764140	0	10	306,87,45,51,36,126,171,93,142,3313,	0,16328,27307,28556,56148,56983,61093,63879,67848,70387,
#Partially deleted in new
chr2	237692332	237749300	chr2:237692332-237749300	0	+	237692455	237749300	789624	7	189,87,45,51,60,36,102,	0,16211,27190,28439,35543,56031,56866,
#Partially deleted in new
chr2	237692338	237764961	chr2:237692338-237764961	1	+	237692455	237764140	0	11	183,87,45,51,36,126,72,171,93,142,2359,	0,16205,27184,28433,56025,56860,58861,60970,63756,67725,70264,
#Partially deleted in new
chr2	237692493	237735676	chr2:237692493-237735676	0	+	237692493	237692493	8553170	9	28,87,18,48,45,51,45,66,88,	0,16050,21765,25268,27029,28278,41280,42774,43095,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	237756094	237770776	chr2:237756094-237770776	0	+	237756094	237756094	8553170	3	93,142,834,	0,3969,13848,
#Partially deleted in new
chr2	237768196	237780315	chr2:237768196-237780315	0	+	237768196	237768196	8553170	6	1622,50,118,80,105,894,	0,1746,3884,4669,6161,11225,
#Partially deleted in new
chr2	237769625	237774227	chr2:237769625-237774227	0	+	237769625	237769625	8553170	5	193,50,118,80,374,	0,317,2455,3240,4228,
#Partially deleted in new
chr2	237769731	237813682	chr2:237769731-237813682	0	+	237769731	237769731	8553170	6	87,50,118,80,105,91,	0,211,2349,3134,4626,43860,
#Partially deleted in new
chr2	237771943	237779561	chr2:237771943-237779561	0	+	237771943	237771943	8553170	4	239,80,105,140,	0,922,2414,7478,
#Partially deleted in new
chr2	237771981	237780309	chr2:237771981-237780309	0	+	237771981	237771981	8553170	3	964,105,888,	0,2376,7440,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	237798388	237842808	chr2:237798388-237842808	0	+	237798388	237798388	8553170	15	473,91,1604,59,1080,23,85,115,129,80,71,286,146,146,970,	0,15203,18604,20512,21786,22957,23354,25051,25902,28861,29044,30828,35608,35889,43450,
#Partially deleted in new
chr2	237798744	237842807	chr2:237798744-237842807	3	+	237813606	237834401	789624	16	117,91,1604,59,177,184,23,85,115,129,80,71,286,146,146,969,	0,14847,18248,20156,21430,22326,22601,22998,24695,25546,28505,28688,30472,35252,35533,43094,
#Partially deleted in new
chr2	237798751	237820336	chr2:237798751-237820336	0	+	237798751	237798751	8553170	3	110,91,162,	0,14840,21423,
#Partially deleted in new
chr2	237799177	237834437	chr2:237799177-237834437	1	+	237813606	237834401	789624	15	239,91,1604,59,177,184,23,85,115,129,80,71,286,146,160,	0,14414,17815,19723,20997,21893,22168,22565,24262,25113,28072,28255,30039,34819,35100,
#Partially deleted in new
chr2	237813663	237841869	chr2:237813663-237841869	1	+	237820272	237834401	789624	13	19,112,184,23,85,115,129,80,71,286,146,146,31,	0,6511,7407,7682,8079,9776,10627,13586,13769,15553,20333,20614,28175,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	237833992	237834871	chr2:237833992-237834871	0	+	237833992	237833992	8553170	2	150,594,	0,285,
#Partially deleted in new
chr2	237858892	237912010	chr2:237858892-237912010	1	+	237877237	237911783	789624	3	235,139,483,	0,18331,52635,
#Partially deleted in new
chr2	237859543	237912114	chr2:237859543-237912114	3	+	237859675	237911783	0	3	184,139,587,	0,17680,51984,
#Partially deleted in new
chr2	237859622	237911956	chr2:237859622-237911956	1	+	237877237	237911783	789624	4	105,61,139,429,	0,15022,17601,51905,
#Partially deleted in new
chr2	237859975	237912010	chr2:237859975-237912010	1	+	237877237	237911783	789624	3	28,139,483,	0,17248,51552,
#Deleted in new
chr2	237869903	237869982	chr2:237869903-237869982	3	+	237869903	237869903	8553170	1	79,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	237966826	238032255	chr2:237966826-238032255	0	+	237973107	237986190	789624	8	306,134,131,30,66,71,58,34,	0,6265,19335,21136,27917,58515,63729,65395,
#Partially deleted in new
chr2	237966944	238041886	chr2:237966944-238041886	0	+	237973107	238030579	0	9	188,134,30,66,71,58,33,63,599,	0,6147,21018,27799,58397,63611,65277,68933,74343,
#Partially deleted in new
chr2	237966954	238042595	chr2:237966954-238042595	3	+	237973107	238041338	0	10	178,134,30,66,68,71,58,33,63,1308,	0,6137,21008,27789,49611,58387,63601,65267,68923,74333,
#Partially deleted in new
chr2	237966954	238042782	chr2:237966954-238042782	1	+	237973107	238041338	0	8	178,134,68,71,58,33,63,1495,	0,6137,49611,58387,63601,65267,68923,74333,
#Partially deleted in new
chr2	237967013	238041545	chr2:237967013-238041545	1	+	237973107	238041338	0	9	119,134,30,66,68,71,58,33,258,	0,6078,20949,27730,49552,58328,63542,65208,74274,
#Partially deleted in new
chr2	237967013	238041293	chr2:237967013-238041293	0	+	237973107	238041293	789624	8	119,134,68,71,58,33,63,6,	0,6078,49552,58328,63542,65208,68864,74274,
#Partially deleted in new
chr2	237967013	238016630	chr2:237967013-238016630	0	+	237973107	238003414	789624	6	119,134,30,66,160,65,	0,6078,20949,27730,36354,49552,
#Partially deleted in new
chr2	237967013	238030595	chr2:237967013-238030595	0	+	237973107	238030595	789624	7	119,134,30,66,101,71,40,	0,6078,20949,27730,49519,58328,63542,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr2	237967013	238099412	chr2:237967013-238099412	0	+	237973107	238030563	789624	19	119,134,30,66,58,33,63,93,113,101,181,128,165,107,37,84,103,76,1211,	0,6078,20949,27730,63542,65208,68864,90144,97343,101051,102283,114695,115031,116234,124204,126847,127406,129787,131188,
#Partially deleted in new
chr2	237967017	238041480	chr2:237967017-238041480	0	+	237973107	238030579	789624	9	115,134,30,66,68,58,33,63,193,	0,6074,20945,27726,49548,63538,65204,68860,74270,
#Partially deleted in new
chr2	237967025	238041542	chr2:237967025-238041542	0	+	237973107	237973674	789624	11	107,134,99,30,66,68,71,58,33,63,255,	0,6066,6623,20937,27718,49540,58316,63530,65196,68852,74262,
#Partially deleted in new
chr2	237967027	238041692	chr2:237967027-238041692	0	+	237967086	238030579	789624	8	105,30,66,71,58,33,63,405,	0,20935,27716,58314,63528,65194,68850,74260,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	237967039	238041415	chr2:237967039-238041415	0	+	237973107	237990467	789624	11	93,134,30,129,66,68,71,58,33,63,128,	0,6052,20923,23384,27704,49526,58302,63516,65182,68838,74248,
#Partially deleted in new
chr2	237967059	238041320	chr2:237967059-238041320	0	+	237973107	238032240	789624	9	73,134,30,66,68,71,33,63,33,	0,6032,20903,27684,49506,58282,65162,68818,74228,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	237967074	238068170	chr2:237967074-238068170	3	+	237973107	238041338	789624	11	58,134,30,66,68,63,117,103,93,113,106,	0,6017,20888,27669,49491,68803,74213,78607,90083,97282,100990,
#Partially deleted in new
chr2	237967074	238041739	chr2:237967074-238041739	0	+	237973107	237973674	789624	12	58,134,99,30,66,160,68,71,58,33,63,452,	0,6017,6574,20888,27669,36293,49491,58267,63481,65147,68803,74213,
#Partially deleted in new
chr2	237967079	238041605	chr2:237967079-238041605	0	+	237973107	238035887	0	8	53,134,30,66,68,71,63,318,	0,6012,20883,27664,49486,58262,68798,74208,
#Partially deleted in new
chr2	237967080	238041770	chr2:237967080-238041770	1	+	237967086	238041338	0	9	52,30,66,68,71,58,33,63,483,	0,20882,27663,49485,58261,63475,65141,68797,74207,
#Partially deleted in new
chr2	237967081	238041917	chr2:237967081-238041917	1	+	237973107	238041338	789624	9	51,134,30,68,71,58,33,63,630,	0,6010,20881,49484,58260,63474,65140,68796,74206,
#Partially deleted in new
chr2	237968792	238041295	chr2:237968792-238041295	0	+	237973107	238041295	789624	10	117,134,30,66,68,71,58,33,63,8,	0,4299,19170,25951,47773,56549,61763,63429,67085,72495,
#Partially deleted in new
chr2	237968792	238042782	chr2:237968792-238042782	1	+	237973107	238041338	0	10	117,134,30,66,68,71,58,33,63,1495,	0,4299,19170,25951,47773,56549,61763,63429,67085,72495,
#Partially deleted in new
chr2	237973094	238035922	chr2:237973094-238035922	0	+	237973107	238035922	789624	7	131,66,68,71,58,33,45,	0,21649,43471,52247,57461,59127,62783,
#Partially deleted in new
chr2	238025260	238041783	chr2:238025260-238041783	0	+	238025260	238025260	8553170	5	152,58,33,63,496,	0,5295,6961,10617,16027,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	238025338	238032669	chr2:238025338-238032669	0	+	238025338	238025338	8553170	3	74,58,448,	0,5217,6883,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	238028970	238029063	chr2:238028970-238029063	3	-	238028970	238028970	8553170	1	93,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	238035128	238041933	chr2:238035128-238041933	0	+	238035128	238035128	8553170	2	812,646,	0,6159,
#Partially deleted in new
chr2	238060888	238099413	chr2:238060888-238099413	3	+	238061030	238098355	789624	12	255,113,101,181,128,165,107,37,84,103,76,1212,	0,3468,7176,8408,20820,21156,22359,30329,32972,33531,35912,37313,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr2	238060927	238099412	chr2:238060927-238099412	0	+	238060927	238060927	8553170	11	216,113,101,181,65,128,165,107,3305,76,1211,	0,3429,7137,8369,12855,20781,21117,22320,30290,35873,37274,
#Partially deleted in new
chr2	238060965	238068231	chr2:238060965-238068231	0	+	238060965	238060965	8553170	3	178,113,167,	0,3391,7099,
#Partially deleted in new
chr2	238061000	238082202	chr2:238061000-238082202	0	+	238061030	238082202	789624	4	143,113,128,158,	0,3356,20708,21044,
#Partially deleted in new
chr2	238061019	238081741	chr2:238061019-238081741	0	+	238061054	238068088	789624	5	124,113,97,181,33,	0,3337,7049,8277,20689,
#Partially deleted in new
chr2	238061030	238092083	chr2:238061030-238092083	1	+	238061054	238091287	789624	8	113,113,101,181,128,165,107,866,	0,3326,7034,8266,20678,21014,22217,30187,
#Partially deleted in new
chr2	238061053	238098219	chr2:238061053-238098219	0	+	238061053	238098219	789624	7	90,113,101,84,103,76,18,	0,3303,7011,32807,33366,35747,37148,
#Partially deleted in new
chr2	238061081	238082221	chr2:238061081-238082221	0	+	238061081	238064418	789624	6	268,113,101,181,128,177,	0,3275,6983,8215,20627,20963,
#Partially deleted in new
chr2	238061090	238069836	chr2:238061090-238069836	0	+	238061090	238069485	789624	4	53,113,101,540,	0,3266,6974,8206,
#Partially deleted in new
chr2	238061112	238065095	chr2:238061112-238065095	0	+	238061112	238061112	8553170	2	31,739,	0,3244,
#Partially deleted in new
chr2	238061292	238081726	chr2:238061292-238081726	0	+	238061292	238061292	8553170	5	93,113,101,181,18,	0,3064,6772,8004,20416,
#Partially deleted in new
chr2	238064359	238083075	chr2:238064359-238083075	0	+	238064359	238064359	8553170	6	110,101,181,128,165,353,	0,3705,4937,17349,17685,18363,
#Partially deleted in new
chr2	238069456	238083246	chr2:238069456-238083246	0	+	238069456	238083184	789624	4	21,128,165,254,	0,12252,12588,13536,
#Partially deleted in new
chr2	238069463	238099359	chr2:238069463-238099359	0	+	238069463	238099353	789624	8	14,128,165,107,37,103,76,130,	0,12245,12581,13784,21754,24956,27337,29766,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	238078564	238091473	chr2:238078564-238091473	0	+	238078564	238078564	8553170	4	3272,165,107,256,	0,3480,4683,12653,
#Partially deleted in new
chr2	238081734	238099413	chr2:238081734-238099413	0	+	238081734	238098221	789624	8	102,165,107,37,84,103,76,1244,	0,310,1513,9483,12126,12685,15066,16435,
#Partially deleted in new
chr2	238082100	238091523	chr2:238082100-238091523	0	+	238082100	238091287	789624	2	109,306,	0,9117,
#Partially deleted in new
chr2	238083245	238094849	chr2:238083245-238094849	0	+	238083245	238094557	789624	4	109,37,84,430,	0,7972,10615,11174,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	238091217	238096186	chr2:238091217-238096186	0	+	238091217	238091217	8553170	4	37,84,103,692,	0,2643,3202,4277,
#Partially deleted in new
chr2	238100156	238133287	chr2:238100156-238133287	3	+	238100419	238131732	789624	9	557,191,187,183,132,115,113,198,3160,	0,1784,4499,7634,16746,25113,27465,28550,29971,
#Partially deleted in new
chr2	238100419	238133287	chr2:238100419-238133287	1	+	238100419	238131732	789624	8	294,191,187,183,115,113,198,3160,	0,1521,4236,7371,24850,27202,28287,29708,
#Partially deleted in new
chr2	238107885	238133286	chr2:238107885-238133286	1	+	238131970	238132393	789624	5	88,115,113,198,3159,	0,17384,19736,20821,22242,
#Deleted in new
chr2	238127389	238133287	chr2:238127389-238133287	1	+	238127623	238131732	789624	4	139,113,198,3160,	0,232,1317,2738,
#Deleted in new
chr2	238127394	238128842	chr2:238127394-238128842	0	+	238127623	238128842	789624	2	340,136,	0,1312,
#Deleted in new
chr2	238128947	238133281	chr2:238128947-238133281	0	+	238128947	238128947	8553170	2	294,3154,	0,1180,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	238138721	238152947	chr2:238138721-238152947	3	+	238140754	238151065	789624	8	37,844,133,87,156,189,146,2134,	0,1963,4077,6180,6955,9112,10285,12092,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	238152888	238155994	chr2:238152888-238155994	3	-	238152888	238152888	8553170	1	3106,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	238158981	238164726	chr2:238158981-238164726	0	+	238158981	238158981	8553170	6	224,123,103,263,109,457,	0,2612,3754,4755,5093,5288,
#Partially deleted in new
chr2	238159007	238167054	chr2:238159007-238167054	3	+	238159007	238167054	789624	8	198,123,103,263,109,91,79,99,	0,2586,3728,4729,5067,5262,6598,7948,
#Partially deleted in new
chr2	238163641	238167183	chr2:238163641-238167183	0	+	238163641	238163641	8553170	4	358,91,79,228,	0,628,1964,3314,
#Partially deleted in new
chr2	238163991	238168900	chr2:238163991-238168900	0	+	238163991	238163991	8553170	4	192,91,79,1945,	0,278,1614,2964,
#Partially deleted in new
chr2	238164027	238168875	chr2:238164027-238168875	0	+	238164027	238164027	8553170	3	333,79,1004,	0,1578,3844,
#Partially deleted in new
chr2	238164332	238168875	chr2:238164332-238168875	0	+	238164332	238168487	789624	3	28,79,505,	0,1273,4038,
#Partially deleted in new
chr2	238165592	238168875	chr2:238165592-238168875	0	+	238165592	238167054	789624	2	92,1920,	0,1363,
#Partially deleted in new
chr2	238170400	238203729	chr2:238170400-238203729	3	-	238170535	238203553	789624	12	276,82,120,122,88,94,107,127,120,57,66,231,	0,542,3133,11664,13252,13619,14780,17730,19452,23874,24404,33098,
#Partially deleted in new
chr2	238170401	238203638	chr2:238170401-238203638	0	-	238170401	238170401	8553170	11	275,82,120,122,88,94,107,127,110,596,140,	0,541,3132,11663,13251,13618,14779,17729,19461,23873,33097,
#Partially deleted in new
chr2	238170401	238173926	chr2:238170401-238173926	0	-	238170401	238170401	8553170	3	275,82,393,	0,541,3132,
#Partially deleted in new
chr2	238170402	238203683	chr2:238170402-238203683	1	-	238184049	238203553	789624	11	274,82,120,122,88,94,127,120,57,66,185,	0,540,3131,11662,13250,13617,17728,19450,23872,24402,33096,
#Partially deleted in new
chr2	238170402	238203683	chr2:238170402-238203683	1	-	238170535	238203553	789624	9	274,82,120,122,88,94,57,66,185,	0,540,3131,11662,13250,13617,23872,24402,33096,
#Partially deleted in new
chr2	238170407	238184096	chr2:238170407-238184096	0	-	238170819	238184096	789624	5	617,120,122,88,77,	0,3126,11657,13245,13612,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	238170408	238187057	chr2:238170408-238187057	0	-	238170408	238170408	8553170	7	268,82,120,122,88,94,1877,	0,534,3125,11656,13244,13611,14772,
#Partially deleted in new
chr2	238183715	238188594	chr2:238183715-238188594	0	-	238183715	238183715	8553170	4	25,94,107,464,	0,304,1465,4415,
#Partially deleted in new
chr2	238183722	238203708	chr2:238183722-238203708	0	-	238183722	238203553	789624	8	18,94,107,127,114,57,66,210,	0,297,1458,4408,6136,10552,11082,19776,
#Partially deleted in new
chr2	238189690	238203680	chr2:238189690-238203680	0	-	238189690	238189690	8553170	4	282,57,66,182,	0,4584,5114,13808,
#Partially deleted in new
chr2	238189697	238203695	chr2:238189697-238203695	0	-	238189697	238189697	8553170	4	275,57,89,197,	0,4577,5084,13801,
#Partially deleted in new
chr2	238194408	238203695	chr2:238194408-238203695	0	-	238194408	238194408	8553170	3	294,66,197,	0,396,9090,
#Partially deleted in new
chr2	238224551	238231585	chr2:238224551-238231585	0	-	238224551	238224551	8553170	3	322,115,252,	0,3132,6782,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	238225112	238231370	chr2:238225112-238231370	1	-	238225112	238225112	8553170	4	387,115,353,37,	0,2571,4203,6221,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	238225115	238231431	chr2:238225115-238231431	0	-	238225115	238225115	8553170	3	384,115,231,	0,2568,6085,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	238225115	238231525	chr2:238225115-238231525	0	-	238225115	238225115	789624	3	384,115,192,	0,2568,6218,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	238225119	238231613	chr2:238225119-238231613	3	-	238225119	238225119	789624	3	1493,115,280,	0,2564,6214,
#Partially deleted in new
chr2	238227544	238231677	chr2:238227544-238231677	0	-	238227544	238227544	8553170	2	254,344,	0,3789,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	238231683	238255633	chr2:238231683-238255633	3	+	238231683	238231683	8553170	7	906,70,67,188,293,125,860,	0,1887,4247,14607,15541,22504,23090,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	238234455	238237206	chr2:238234455-238237206	0	+	238234455	238234455	8553170	2	172,1276,	0,1475,
#Deleted in new
chr2	238238266	238240124	chr2:238238266-238240124	3	-	238238826	238239905	789624	4	985,82,87,300,	0,1220,1394,1558,
#Deleted in new
chr2	238238269	238240038	chr2:238238269-238240038	1	-	238239091	238239905	789624	3	1299,87,214,	0,1391,1555,
#Deleted in new
chr2	238238275	238239971	chr2:238238275-238239971	1	-	238238826	238239905	789624	4	976,76,87,147,	0,1211,1385,1549,
#Deleted in new
chr2	238238604	238239958	chr2:238238604-238239958	1	-	238238826	238239905	789624	3	647,82,134,	0,882,1220,
#Deleted in new
chr2	238238775	238239671	chr2:238238775-238239671	0	-	238239528	238239671	789624	3	381,82,11,	0,711,885,
#Deleted in new
chr2	238238859	238240041	chr2:238238859-238240041	1	-	238239122	238239905	789624	4	392,42,87,217,	0,667,801,965,
#Deleted in new
chr2	238239169	238240024	chr2:238239169-238240024	1	-	238239528	238239905	789624	3	82,82,364,	0,317,491,
#Deleted in new
chr2	238239179	238240662	chr2:238239179-238240662	0	-	238239179	238240407	789624	4	72,82,87,271,	0,307,481,1212,
#Deleted in new
chr2	238239215	238240001	chr2:238239215-238240001	0	-	238239215	238239905	789624	2	353,177,	0,609,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr2	238244037	238288609	chr2:238244037-238288609	3	-	238246374	238277936	789624	23	2487,151,193,163,791,255,165,125,148,85,126,109,154,107,79,143,52,202,122,155,63,249,261,	0,5024,6513,7561,8874,11619,12884,14238,14459,15931,16790,17691,18153,18914,21474,24018,24885,27274,29032,31705,33093,33669,44311,
#Deleted in new
chr2	238261440	238262975	chr2:238261440-238262975	0	-	238261440	238261440	8553170	3	397,154,24,	0,750,1511,
#Partially deleted in new
chr2	238261809	238277936	chr2:238261809-238277936	0	-	238261809	238261809	8553170	10	28,154,79,143,52,202,122,155,63,230,	0,381,3702,6246,7113,9502,11260,13933,15321,15897,
#Partially deleted in new
chr2	238275862	238290102	chr2:238275862-238290102	0	-	238275862	238277936	789624	4	35,63,249,204,	0,1268,1844,14036,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	238289126	238300185	chr2:238289126-238300185	3	+	238289126	238289126	8553170	4	671,103,121,1529,	0,6606,9250,9530,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	238295391	238300620	chr2:238295391-238300620	3	-	238295391	238295391	8553170	4	349,137,387,109,	0,3248,4410,5120,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	238320440	238400900	chr2:238320440-238400900	3	+	238320662	238398919	0	17	345,69,162,144,417,72,76,96,102,21,85,84,124,37,77,221,2147,	0,4865,5368,8245,8485,12383,13519,17921,24056,27014,28323,28884,32386,32732,35563,77018,78313,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr2	238320440	238400822	chr2:238320440-238400822	1	+	238320662	238398919	0	15	345,69,162,144,417,72,76,21,85,84,124,37,77,221,2069,	0,4865,5368,8245,8485,12383,13519,27014,28323,28884,32386,32732,35563,77018,78313,
#Partially deleted in new
chr2	238320535	238329342	chr2:238320535-238329342	0	+	238320662	238325313	789624	5	278,69,162,144,417,	0,4770,5273,8150,8390,
#Partially deleted in new
chr2	238347182	238397680	chr2:238347182-238397680	0	+	238347182	238347182	8553170	7	293,85,84,124,37,77,222,	0,1581,2142,5644,5990,8821,50276,
#Deleted in new
chr2	238397421	238398971	chr2:238397421-238398971	0	+	238397421	238397421	8553170	2	258,218,	0,1332,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	238412641	238412745	chr2:238412641-238412745	3	+	238412641	238412641	8553170	1	104,	0,
#Partially deleted in new
chr2	238426741	238444375	chr2:238426741-238444375	0	+	238426741	238426741	8553170	4	85,147,303,34,	0,6807,8969,17600,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	238426823	238452250	chr2:238426823-238452250	3	+	238427070	238446511	789624	5	296,142,303,386,5867,	0,6730,8887,17518,19560,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	238426829	238435881	chr2:238426829-238435881	0	+	238426829	238426829	8553170	4	290,135,147,171,	0,6483,6719,8881,
#Partially deleted in new
chr2	238427003	238446617	chr2:238427003-238446617	1	+	238427070	238446511	789624	4	116,142,386,234,	0,6550,17338,19380,
#Partially deleted in new
chr2	238427028	238446651	chr2:238427028-238446651	0	+	238427070	238435847	789624	4	91,303,386,268,	0,8682,17313,19355,
#Deleted in new
chr2	238427076	238427729	chr2:238427076-238427729	3	-	238427076	238427076	8553170	2	416,36,	0,617,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	238433313	238444474	chr2:238433313-238444474	0	+	238433313	238433313	8553170	3	382,303,133,	0,2397,11028,
#Partially deleted in new
chr2	238435168	238446397	chr2:238435168-238446397	0	+	238435168	238435168	8553170	3	93,386,14,	0,9173,11215,
#Partially deleted in new
chr2	238446383	238452213	chr2:238446383-238452213	0	+	238446383	238446383	8553170	2	272,429,	0,5401,
#Deleted in new
chr2	238450144	238452250	chr2:238450144-238452250	0	+	238450144	238450144	8553170	2	115,466,	0,1640,
#Partially deleted in new
chr2	238454907	238457520	chr2:238454907-238457520	7	+	238454907	238454907	16724991	2	304,252,	0,2361,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	238510689	238555054	chr2:238510689-238555054	3	-	238510689	238510689	789624	3	1257,137,581,	0,40721,43784,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	238720323	238740780	chr2:238720323-238740780	3	+	238720323	238720323	8553170	2	98,455,	0,20002,
#Deleted in new
chr2	238735262	238735547	chr2:238735262-238735547	7	-	238735262	238735262	16724991	1	285,	0,
#Deleted in new
chr2	238788647	238789716	chr2:238788647-238789716	3	-	238788647	238788647	8553170	2	154,438,	0,631,
#Partially deleted in new
chr2	238848031	238887252	chr2:238848031-238887252	1	+	238848215	238848698	789624	2	702,474,	0,38747,
#Partially deleted in new
chr2	238848031	238910543	chr2:238848031-238910543	3	+	238848215	238848698	789624	2	702,702,	0,61810,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	238919301	238926269	chr2:238919301-238926269	3	-	238919301	238919301	789624	10	215,120,93,94,262,343,1318,830,183,31,	0,426,1186,2081,2308,2694,3771,5556,6636,6937,
#Partially deleted in new
chr2	239048167	239400949	chr2:239048167-239400949	3	-	239053096	239352699	0	27	4969,142,85,134,119,98,120,88,56,108,47,121,134,187,258,224,199,117,113,132,122,121,151,245,72,241,573,	0,5292,6581,18554,20321,32927,33934,35987,39391,41841,46842,54608,59882,63358,66885,78288,86077,86359,91516,96415,108484,115635,128245,141665,188425,304510,352209,
#Partially deleted in new
chr2	239048168	239400949	chr2:239048168-239400949	1	-	239053096	239176551	0	27	4968,142,85,134,119,98,120,88,56,108,47,121,134,187,258,239,199,117,113,132,122,121,151,245,72,241,573,	0,5291,6580,18553,20320,32926,33933,35986,39390,41840,46841,54607,59881,63357,66884,78287,86076,86358,91515,96414,108483,115634,128244,141664,188424,304509,352208,
#Partially deleted in new
chr2	239053045	239066981	chr2:239053045-239066981	0	-	239053096	239066981	789624	4	91,142,85,260,	0,414,1703,13676,
#Partially deleted in new
chr2	239055183	239081135	chr2:239055183-239081135	0	-	239055183	239055183	8553170	4	157,134,119,41,	0,11538,13305,25911,
#Deleted in new
chr2	239068816	239068914	chr2:239068816-239068914	3	-	239068816	239068816	5263520	1	98,	0,
#Partially deleted in new
chr2	239080917	239108053	chr2:239080917-239108053	0	-	239080917	239080917	8553170	8	275,120,88,56,108,47,121,4,	0,1184,3237,6641,9091,14092,21858,27132,
#Deleted in new
chr2	239085826	239085926	chr2:239085826-239085926	3	-	239085826	239085826	5263520	1	100,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr2	239089675	239298639	chr2:239089675-239298639	0	-	239089675	239089675	8553170	17	441,47,121,134,187,258,224,199,117,113,132,122,121,151,245,72,474,	0,5334,13100,18374,21850,25377,36780,44569,44851,50008,54907,66976,74127,86737,100157,146917,208490,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	239091143	239102841	chr2:239091143-239102841	0	-	239091143	239091143	8553170	3	751,47,51,	0,3866,11647,
#Partially deleted in new
chr2	239094573	239401654	chr2:239094573-239401654	0	-	239094573	239094573	8553170	17	483,121,134,187,258,239,199,117,113,132,122,121,151,245,72,241,253,	0,8202,13476,16952,20479,31882,39671,39953,45110,50009,62078,69229,81839,95259,142019,258104,306828,
#Partially deleted in new
chr2	239094889	239298530	chr2:239094889-239298530	0	-	239094889	239094889	8553170	16	167,121,134,187,258,239,199,117,113,132,122,121,151,245,72,365,	0,7886,13160,16636,20163,31566,39355,39637,44794,49693,61762,68913,81523,94943,141703,203276,
#Partially deleted in new
chr2	239102608	239108104	chr2:239102608-239108104	0	-	239102608	239102608	8553170	2	288,55,	0,5441,
#Partially deleted in new
chr2	239126632	239155013	chr2:239126632-239155013	0	-	239126632	239126632	8553170	6	62,199,117,113,132,396,	0,7612,7894,13051,17950,27985,
#Deleted in new
chr2	239134324	239140973	chr2:239134324-239140973	0	-	239134324	239140973	789624	4	119,117,113,96,	0,202,5359,6553,
#Partially deleted in new
chr2	239134348	239155575	chr2:239134348-239155575	0	-	239134348	239134348	8553170	5	95,117,113,132,95,	0,178,5335,10234,21132,
#Partially deleted in new
chr2	239163832	239191056	chr2:239163832-239191056	0	-	239163832	239190979	789624	4	91,151,245,78,	0,12580,26000,27146,
#Partially deleted in new
chr2	239176452	239309212	chr2:239176452-239309212	0	-	239176452	239236605	789624	4	111,245,72,126,	0,13380,60140,132634,
#Partially deleted in new
chr2	239186487	239236669	chr2:239186487-239236669	0	-	239186487	239186487	8553170	3	673,245,77,	0,3345,50105,
#Partially deleted in new
chr2	239236597	239401011	chr2:239236597-239401011	0	-	239236597	239352699	789624	3	67,241,34,	0,116080,164380,
#Deleted in new
chr2	239305461	239305545	chr2:239305461-239305545	3	+	239305461	239305461	5263520	1	84,	0,
#Deleted in new
chr2	239351723	239351804	chr2:239351723-239351804	3	-	239351723	239351723	5263520	1	81,	0,
#Partially deleted in new
chr2	239401435	239402357	chr2:239401435-239402357	0	+	239401435	239401435	789624	2	101,283,	0,639,
#Partially deleted in new
chr2	239401747	239402355	chr2:239401747-239402355	0	+	239401747	239401747	789624	2	133,281,	0,327,
#Partially deleted in new
chr2	239401804	239402364	chr2:239401804-239402364	3	+	239401804	239401804	789624	2	165,290,	0,270,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	239578300	239586094	chr2:239578300-239586094	3	+	239578300	239578300	8553170	2	624,3076,	0,4718,
#Partially deleted in new
chr2	239625697	239630839	chr2:239625697-239630839	3	+	239625697	239625697	8553170	2	86,262,	0,4880,
#Deleted in new
chr2	239734955	239735538	chr2:239734955-239735538	3	+	239734955	239734955	8553170	1	583,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	239762859	239802883	chr2:239762859-239802883	3	+	239762859	239762859	789624	3	73,122,3043,	0,17444,36981,
#Partially deleted in new
chr2	239892449	240011660	chr2:239892449-240011660	0	-	239895218	240011660	789624	6	258,110,109,86,55,44,	0,2755,97624,112760,114866,119167,
#Deleted in new
chr2	239943014	239943094	chr2:239943014-239943094	3	-	239943014	239943014	5263520	1	80,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr2	239957371	240025402	chr2:239957371-240025402	3	-	239961117	240025301	0	10	3815,109,86,55,80,122,87,216,169,176,	0,32702,47838,49944,54245,57367,61181,63825,64800,67855,
#Partially deleted in new
chr2	239958536	239976585	chr2:239958536-239976585	0	-	239958536	239958536	8553170	2	501,81,	0,17968,
#Partially deleted in new
chr2	239960730	240011727	chr2:239960730-240011727	0	-	239960730	239960730	8553170	5	456,109,86,55,111,	0,29343,44479,46585,50886,
#Partially deleted in new
chr2	239960738	240025306	chr2:239960738-240025306	1	-	239961117	240025301	789624	11	448,105,109,86,55,80,122,87,216,169,80,	0,21376,29335,44471,46577,50878,54000,57814,60458,61433,64488,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	239960740	240025323	chr2:239960740-240025323	0	-	239960740	239960740	8553170	9	446,109,86,55,3244,87,216,169,97,	0,29333,44469,46575,50876,57812,60456,61431,64486,
#Partially deleted in new
chr2	239960740	240025345	chr2:239960740-240025345	1	-	239961117	240025301	789624	11	446,109,86,55,80,122,87,216,170,17,101,	0,29333,44469,46575,50876,53998,57812,60456,61431,64486,64504,
#Partially deleted in new
chr2	239961163	240025343	chr2:239961163-240025343	0	-	239961163	240025301	789624	7	23,109,55,87,216,169,117,	0,28910,46152,57389,60033,61008,64063,
#Partially deleted in new
chr2	239969451	240011676	chr2:239969451-240011676	0	-	239969672	240011676	789624	5	311,109,86,55,60,	0,20622,35758,37864,42165,
#Partially deleted in new
chr2	239973515	240011654	chr2:239973515-240011654	0	-	239973532	240011654	789624	5	146,109,86,55,38,	0,16558,31694,33800,38101,
#Partially deleted in new
chr2	239983516	240025324	chr2:239983516-240025324	1	-	239983516	240025301	0	11	201,109,86,55,80,92,91,116,216,169,98,	0,6557,21693,23799,28100,31252,34298,35007,37680,38655,41710,
#Partially deleted in new
chr2	240014798	240025313	chr2:240014798-240025313	0	-	240021202	240025301	789624	4	62,87,326,87,	0,3754,6288,10428,
#Partially deleted in new
chr2	240018406	240025307	chr2:240018406-240025307	1	-	240018493	240025301	789624	4	233,216,169,81,	0,2790,3765,6820,
#Partially deleted in new
chr2	240021116	240025324	chr2:240021116-240025324	0	-	240021116	240021116	8553170	3	296,169,98,	0,1055,4110,
#Deleted in new
chr2	240028964	240030456	chr2:240028964-240030456	3	-	240029490	240030429	789624	1	1492,	0,
#Deleted in new
chr2	240045076	240046072	chr2:240045076-240046072	1	-	240045076	240046072	789624	1	996,	0,
#Deleted in new
chr2	240045076	240047027	chr2:240045076-240047027	3	-	240045076	240046072	789624	2	1021,76,	0,1875,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	240079432	240080362	chr2:240079432-240080362	7	+	240079432	240079432	16724991	2	90,313,	0,617,
#Deleted in new
chr2	240109101	240110052	chr2:240109101-240110052	7	+	240109101	240109101	16724991	1	951,	0,
#Partially deleted in new
chr2	240126562	240136347	chr2:240126562-240136347	1	-	240126562	240136347	789624	5	378,118,34,73,156,	0,3348,4492,7370,9629,
#Partially deleted in new
chr2	240130825	240136303	chr2:240130825-240136303	3	-	240131050	240136284	789624	3	263,73,82,	0,3107,5396,
#Partially deleted in new
chr2	240130827	240136176	chr2:240130827-240136176	0	-	240130827	240130827	8553170	3	261,73,306,	0,3105,5043,
#Deleted in new
chr2	240130827	240134290	chr2:240130827-240134290	0	-	240130827	240130827	8553170	2	261,358,	0,3105,
#Partially deleted in new
chr2	240133982	240136807	chr2:240133982-240136807	0	-	240133982	240136347	789624	2	23,586,	0,2239,
#Partially deleted in new
chr2	240139025	240144562	chr2:240139025-240144562	3	-	240139169	240140326	789624	5	329,27,176,74,39,	0,1036,1243,1594,5498,
#Deleted in new
chr2	240139028	240140656	chr2:240139028-240140656	1	-	240139169	240140326	789624	4	326,27,176,37,	0,1033,1240,1591,
#Partially deleted in new
chr2	240227559	240256035	chr2:240227559-240256035	3	-	240227559	240227559	8553170	3	152,45,232,	0,1048,28244,
#Deleted in new
chr2	240289215	240289443	chr2:240289215-240289443	3	+	240289215	240289215	8553170	1	228,	0,
#Partially deleted in new
chr2	240435670	240468078	chr2:240435670-240468078	3	+	240435918	240466290	0	9	414,159,392,166,131,120,134,176,2021,	0,23359,26520,27676,28945,29185,29406,29802,30387,
#Partially deleted in new
chr2	240442326	240466358	chr2:240442326-240466358	0	+	240442326	240442326	8553170	8	180,159,392,1400,120,134,176,301,	0,16703,19864,21020,22529,22750,23146,23731,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	240449314	240451543	chr2:240449314-240451543	0	-	240449314	240449314	8553170	2	607,933,	0,1296,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	240449417	240456714	chr2:240449417-240456714	3	-	240449417	240449417	8553170	3	504,312,118,	0,1193,7179,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	240449418	240456700	chr2:240449418-240456700	1	-	240449418	240449418	5263520	2	1913,104,	0,7178,
#Deleted in new
chr2	240450762	240452431	chr2:240450762-240452431	0	-	240450762	240450762	8553170	1	1669,	0,
#Deleted in new
chr2	240452810	240466330	chr2:240452810-240466330	1	+	240459079	240466290	789624	9	284,159,392,166,131,120,134,176,273,	0,6219,9380,10536,11805,12045,12266,12662,13247,
#Deleted in new
chr2	240454837	240462484	chr2:240454837-240462484	0	+	240455004	240462484	789624	3	183,159,294,	0,4192,7353,
#Deleted in new
chr2	240456000	240456089	chr2:240456000-240456089	3	+	240456000	240456000	5263520	1	89,	0,
#Deleted in new
chr2	240457433	240462568	chr2:240457433-240462568	0	+	240459079	240462568	789624	3	36,159,378,	0,1596,4757,
#Deleted in new
chr2	240457964	240464939	chr2:240457964-240464939	0	+	240459079	240464939	789624	6	153,159,392,166,131,84,	0,1065,4226,5382,6651,6891,
#Deleted in new
chr2	240458186	240466358	chr2:240458186-240466358	0	+	240458186	240458186	8553170	7	1002,392,1400,120,134,176,301,	0,4004,5160,6669,6890,7286,7871,
#Deleted in new
chr2	240463396	240466200	chr2:240463396-240466200	0	+	240463396	240466200	789624	6	116,131,141,134,176,143,	0,1219,1438,1680,2076,2661,
#Deleted in new
chr2	240465526	240466793	chr2:240465526-240466793	0	+	240465526	240465526	8553170	3	122,312,348,	0,531,919,
#Partially deleted in new
chr2	240479421	240557974	chr2:240479421-240557974	3	-	240479608	240554934	789624	17	234,161,79,166,114,132,108,141,141,172,497,165,217,473,144,190,94,	0,1515,2761,20536,21030,28138,29926,32439,33380,40940,44463,46263,46807,49615,73492,75444,78459,
#Partially deleted in new
chr2	240479421	240558021	chr2:240479421-240558021	1	-	240479608	240557335	789624	14	234,161,79,166,114,132,141,172,497,165,144,190,163,141,	0,1515,2761,20536,21030,28138,33380,40940,44463,46263,73492,75444,77768,78459,
#Partially deleted in new
chr2	240479421	240557962	chr2:240479421-240557962	1	-	240479608	240557335	789624	14	234,161,79,166,114,141,141,172,497,165,144,190,163,82,	0,1515,2761,20536,21030,32439,33380,40940,44463,46263,73492,75444,77768,78459,
#Partially deleted in new
chr2	240479421	240558021	chr2:240479421-240558021	1	-	240525794	240554934	789624	17	234,161,79,166,114,132,108,141,141,172,497,165,473,144,190,163,141,	0,1515,2761,20536,21030,28138,29926,32439,33380,40940,44463,46263,49615,73492,75444,77768,78459,
#Partially deleted in new
chr2	240479421	240557963	chr2:240479421-240557963	1	-	240479608	240557335	789624	17	234,161,79,166,114,132,108,141,141,172,125,78,165,144,190,163,83,	0,1515,2761,20536,21030,28138,29926,32439,33380,40940,44463,44882,46263,73492,75444,77768,78459,
#Partially deleted in new
chr2	240479426	240561110	chr2:240479426-240561110	1	-	240479608	240560950	789624	15	229,161,79,166,114,132,141,141,172,497,165,144,190,163,380,	0,1510,2756,20531,21025,28133,32434,33375,40935,44458,46258,73487,75439,77763,81304,
#Partially deleted in new
chr2	240479608	240558002	chr2:240479608-240558002	1	-	240479608	240557335	789624	18	47,161,79,166,114,132,108,141,141,172,497,165,217,473,144,190,163,122,	0,1328,2574,20349,20843,27951,29739,32252,33193,40753,44276,46076,46620,49428,73305,75257,77581,78272,
#Partially deleted in new
chr2	240480992	240500104	chr2:240480992-240500104	0	-	240480992	240500104	789624	2	105,147,	0,18965,
#Partially deleted in new
chr2	240500523	240507809	chr2:240500523-240507809	0	-	240500523	240500523	8553170	2	42,250,	0,7036,
#Partially deleted in new
chr2	240500543	240520527	chr2:240500543-240520527	0	-	240500543	240520527	789624	5	22,132,108,141,166,	0,7016,8804,12258,19818,
#Partially deleted in new
chr2	240519754	240558021	chr2:240519754-240558021	1	-	240520103	240557335	789624	8	355,172,497,165,144,190,163,141,	0,607,4130,5930,33159,35111,37435,38126,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	240521937	240561091	chr2:240521937-240561091	1	-	240523880	240554934	789624	5	2444,165,144,190,361,	0,3747,30976,32928,38793,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	240521938	240527881	chr2:240521938-240527881	0	-	240521938	240521938	8553170	2	2443,2197,	0,3746,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	240521938	240561091	chr2:240521938-240561091	0	-	240521938	240521938	8553170	3	2443,165,361,	0,3746,38792,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	240523257	240555560	chr2:240523257-240555560	0	-	240523257	240523257	8553170	3	1124,165,2647,	0,2427,29656,
#Partially deleted in new
chr2	240523822	240560768	chr2:240523822-240560768	0	-	240523822	240523822	8553170	6	559,165,473,144,190,38,	0,1862,5214,29091,31043,36908,
#Partially deleted in new
chr2	240525684	240561091	chr2:240525684-240561091	0	-	240525684	240561040	789624	4	165,144,190,56,	0,27229,29181,35351,
#Partially deleted in new
chr2	240525803	240560776	chr2:240525803-240560776	0	-	240525803	240560776	789624	3	46,473,46,	0,3233,34927,
#Partially deleted in new
chr2	240526236	240560769	chr2:240526236-240560769	0	-	240526236	240526236	8553170	4	209,144,190,39,	0,26677,28629,34494,
#Partially deleted in new
chr2	240529040	240569177	chr2:240529040-240569177	0	-	240529040	240554934	789624	4	469,144,190,142,	0,23873,25825,39995,
#Partially deleted in new
chr2	240532075	240569209	chr2:240532075-240569209	0	-	240532075	240532075	8553170	4	60,144,190,174,	0,20838,22790,36960,
#Partially deleted in new
chr2	240552741	240561445	chr2:240552741-240561445	0	-	240552741	240552741	8553170	3	316,190,715,	0,2124,7989,
#Partially deleted in new
chr2	240553033	240557406	chr2:240553033-240557406	0	-	240553033	240553033	8553170	3	24,190,217,	0,1832,4156,
#Partially deleted in new
chr2	240554978	240560826	chr2:240554978-240560826	0	-	240554978	240557335	789624	4	77,163,316,96,	0,2211,3325,5752,
#Partially deleted in new
chr2	240560053	240564014	chr2:240560053-240564014	3	+	240560684	240561467	0	3	1024,190,341,	0,1276,3620,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	240560301	240564014	chr2:240560301-240564014	1	+	240560684	240561467	0	2	776,2685,	0,1028,
#Partially deleted in new
chr2	240560791	240564014	chr2:240560791-240564014	0	+	240560791	240561467	789624	3	286,190,341,	0,538,2882,
#Partially deleted in new
chr2	240562486	240564013	chr2:240562486-240564013	0	+	240562486	240562486	8553170	2	110,340,	0,1187,
#Partially deleted in new
chr2	240562982	240564013	chr2:240562982-240564013	0	+	240562982	240562982	8553170	2	148,340,	0,691,
#Deleted in new
chr2	240565803	240576727	chr2:240565803-240576727	0	+	240574570	240576727	789624	4	138,98,109,193,	0,8711,9698,10731,
#Deleted in new
chr2	240568586	240581372	chr2:240568586-240581372	3	+	240568586	240577892	789624	11	528,141,152,117,236,114,113,109,231,143,3774,	0,3836,4523,5188,5526,5928,6443,6915,7948,8261,9012,
#Deleted in new
chr2	240568860	240578727	chr2:240568860-240578727	0	+	240568860	240568860	8553170	9	254,141,152,854,113,109,231,143,1129,	0,3562,4249,4914,6169,6641,7674,7987,8738,
#Deleted in new
chr2	240573869	240578724	chr2:240573869-240578724	0	+	240573869	240573869	8553170	4	22,2653,143,1126,	0,243,2978,3729,
#Deleted in new
chr2	240574553	240576966	chr2:240574553-240576966	0	+	240574553	240574553	8553170	4	75,581,231,117,	0,476,1981,2296,
#Deleted in new
chr2	240574721	240577690	chr2:240574721-240577690	0	+	240574721	240574721	8553170	6	124,113,109,231,143,92,	0,308,780,1813,2126,2877,
#Deleted in new
chr2	240574818	240575610	chr2:240574818-240575610	0	+	240574818	240574818	8553170	2	324,109,	0,683,
#Deleted in new
chr2	240575073	240575776	chr2:240575073-240575776	0	+	240575073	240575073	8553170	2	69,275,	0,428,
#Deleted in new
chr2	240575297	240577642	chr2:240575297-240577642	0	+	240575297	240575297	8553170	4	313,231,143,44,	0,1237,1550,2301,
#Deleted in new
chr2	240575501	240578724	chr2:240575501-240578724	0	+	240575501	240577892	789624	4	109,198,143,1126,	0,1066,1346,2097,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	240582699	240586699	chr2:240582699-240586699	3	-	240582699	240582699	789624	1	4000,	0,
#Partially deleted in new
chr2	240586715	240599109	chr2:240586715-240599109	3	+	240586911	240598680	789624	12	337,132,197,218,142,167,281,203,262,200,46,459,	0,2627,4099,5217,7190,7827,8308,9603,9965,11172,11636,11935,
#Deleted in new
chr2	240586733	240589810	chr2:240586733-240589810	0	+	240586733	240586733	8553170	2	319,468,	0,2609,
#Partially deleted in new
chr2	240586738	240599104	chr2:240586738-240599104	1	+	240586911	240598669	789624	11	314,132,197,218,142,167,281,203,262,200,454,	0,2604,4076,5194,7167,7804,8285,9580,9942,11149,11912,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	240586771	240617705	chr2:240586771-240617705	1	+	240586911	240616998	789624	4	281,132,124,730,	0,2571,29616,30204,
#Partially deleted in new
chr2	240586870	240599084	chr2:240586870-240599084	0	+	240586911	240594548	789624	12	182,132,186,218,142,167,281,203,262,200,46,434,	0,2472,3944,5062,7035,7672,8153,9448,9810,11017,11481,11780,
#Partially deleted in new
chr2	240586870	240599084	chr2:240586870-240599084	1	+	240586911	240598680	789624	4	182,200,46,434,	0,11017,11481,11780,
#Partially deleted in new
chr2	240586870	240599084	chr2:240586870-240599084	1	+	240586911	240598680	789624	10	182,132,197,218,142,167,281,200,46,434,	0,2472,3944,5062,7035,7672,8153,11017,11481,11780,
#Partially deleted in new
chr2	240586870	240599084	chr2:240586870-240599084	0	+	240586911	240597948	789624	11	182,132,197,218,142,167,281,203,200,46,434,	0,2472,3944,5062,7035,7672,8153,9448,11017,11481,11780,
#Partially deleted in new
chr2	240586870	240599109	chr2:240586870-240599109	0	+	240586911	240597948	789624	12	182,132,197,218,142,167,281,203,93,200,46,459,	0,2472,3944,5062,7035,7672,8153,9448,9979,11017,11481,11780,
#Partially deleted in new
chr2	240586870	240599084	chr2:240586870-240599084	0	+	240586911	240595990	789624	13	182,132,197,218,142,167,281,219,203,93,200,46,434,	0,2472,3944,5062,7035,7672,8153,9063,9448,9979,11017,11481,11780,
#Partially deleted in new
chr2	240589883	240599103	chr2:240589883-240599103	0	+	240589883	240589883	8553170	9	2267,142,167,281,588,262,200,46,453,	0,4022,4659,5140,6050,6797,8004,8468,8767,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	240590991	240592878	chr2:240590991-240592878	0	+	240590991	240592498	789624	3	20,218,400,	0,941,1487,
#Deleted in new
chr2	240594240	240595103	chr2:240594240-240595103	0	+	240594240	240594240	8553170	2	469,80,	0,783,
#Deleted in new
chr2	240595145	240596702	chr2:240595145-240596702	0	+	240595145	240595145	8553170	2	159,384,	0,1173,
#Deleted in new
chr2	240595233	240598399	chr2:240595233-240598399	0	+	240595233	240595233	8553170	4	71,588,200,48,	0,700,2654,3118,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	240598023	240607520	chr2:240598023-240607520	0	+	240598023	240598680	789624	5	64,46,56,226,314,	0,328,627,8363,9183,
#Partially deleted in new
chr2	240605430	240631259	chr2:240605430-240631259	3	+	240629952	240630882	789624	6	140,226,124,304,144,1311,	0,956,10957,11659,13457,24518,
#Partially deleted in new
chr2	240605444	240631170	chr2:240605444-240631170	1	+	240629952	240630882	789624	6	126,226,124,190,144,1222,	0,942,10943,11759,13443,24504,
#Partially deleted in new
chr2	240618942	240631258	chr2:240618942-240631258	1	+	240618942	240630882	789624	2	89,1310,	0,11006,
#Partially deleted in new
chr2	240625244	240630882	chr2:240625244-240630882	1	+	240629952	240630882	789624	2	324,934,	0,4704,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	240627432	240631253	chr2:240627432-240631253	1	+	240629952	240630882	789624	1	3821,	0,
#Deleted in new
chr2	240672529	240672812	chr2:240672529-240672812	7	+	240672529	240672529	16724991	1	283,	0,
#Partially deleted in new
chr2	240676417	240682906	chr2:240676417-240682906	0	-	240682421	240682837	789624	5	327,2183,117,310,76,	0,1181,3934,5813,6413,
#Deleted in new
chr2	240676418	240679368	chr2:240676418-240679368	0	-	240676418	240676418	8553170	3	326,100,97,	0,2504,2853,
#Partially deleted in new
chr2	240676421	240682906	chr2:240676421-240682906	1	-	240676544	240682837	789624	4	323,117,448,192,	0,3930,5809,6293,
#Partially deleted in new
chr2	240676437	240682900	chr2:240676437-240682900	3	-	240676544	240682837	789624	3	307,117,670,	0,3914,5793,
#Partially deleted in new
chr2	240676454	240682864	chr2:240676454-240682864	0	-	240682421	240682837	789624	4	290,117,310,34,	0,3897,5776,6376,
#Partially deleted in new
chr2	240679271	240682880	chr2:240679271-240682880	0	-	240682421	240682837	789624	4	167,117,310,50,	0,1080,2959,3559,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	240686333	240690414	chr2:240686333-240690414	3	+	240686333	240686333	8553170	3	1488,97,1813,	0,2082,2268,
#Partially deleted in new
chr2	240691844	240698483	chr2:240691844-240698483	1	+	240691913	240698356	789624	4	192,448,117,327,	0,229,2588,6312,
#Partially deleted in new
chr2	240691850	240698479	chr2:240691850-240698479	3	+	240691913	240698356	789624	4	195,475,117,323,	0,196,2582,6306,
#Deleted in new
chr2	240695229	240698483	chr2:240695229-240698483	0	+	240695229	240695229	8553170	3	27,167,327,	0,233,2927,
#Deleted in new
chr2	240695532	240698482	chr2:240695532-240698482	0	+	240695532	240695532	8553170	3	97,100,326,	0,346,2624,
#Deleted in new
chr2	240696974	240698478	chr2:240696974-240698478	0	+	240696974	240696974	8553170	2	328,322,	0,1182,
#Deleted in new
chr2	240701203	240701685	chr2:240701203-240701685	7	-	240701203	240701203	16724991	1	482,	0,
#Partially deleted in new
chr2	240713760	240820372	chr2:240713760-240820372	3	-	240717363	240797752	789624	47	3646,119,193,153,125,78,201,146,62,134,115,106,85,67,109,56,119,91,172,139,86,119,138,179,149,94,73,181,84,107,80,76,80,134,143,79,76,18,66,78,112,179,66,180,77,166,251,	0,4289,5245,6013,7153,8046,8695,9652,10214,11510,13065,23302,26297,26537,27508,29168,30181,31666,31977,32278,33475,36668,44599,46904,47468,48958,49258,49405,51949,53154,53505,55372,55866,57210,59353,60422,62090,68829,69283,69978,71228,72574,73490,74290,75475,83886,106361,
#Deleted in new
chr2	240713763	240724849	chr2:240713763-240724849	0	-	240713763	240713763	8553170	9	3643,119,193,153,125,78,201,146,875,	0,4286,5242,6010,7150,8043,8692,9649,10211,
#Partially deleted in new
chr2	240713768	240820308	chr2:240713768-240820308	1	-	240717363	240797752	0	49	3638,119,193,153,125,78,201,146,62,134,115,106,85,67,109,56,119,91,172,139,86,119,276,138,179,149,94,73,181,84,107,80,76,80,134,27,143,79,76,18,66,78,112,179,66,180,77,166,187,	0,4281,5237,6005,7145,8038,8687,9644,10206,11502,13057,23294,26289,26529,27500,29160,30173,31658,31969,32270,33467,36660,43550,44591,46896,47460,48950,49250,49397,51941,53146,53497,55364,55858,57202,58801,59345,60414,62082,68821,69275,69970,71220,72566,73482,74282,75467,83878,106353,
#Partially deleted in new
chr2	240713805	240781938	chr2:240713805-240781938	0	-	240713805	240713805	8553170	39	3601,119,193,153,125,78,201,146,62,134,115,106,85,67,109,56,119,91,172,139,86,119,138,179,149,94,73,181,84,107,80,76,80,134,27,143,79,76,152,	0,4244,5200,5968,7108,8001,8650,9607,10169,11465,13020,23257,26252,26492,27463,29123,30136,31621,31932,32233,33430,36623,44554,46859,47423,48913,49213,49360,51904,53109,53460,55327,55821,57165,58764,59308,60377,62045,67981,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr2	240713815	240744687	chr2:240713815-240744687	0	-	240713815	240713815	8553170	16	3591,119,193,153,125,78,201,146,62,1670,106,85,67,109,56,746,	0,4234,5190,5958,7098,7991,8640,9597,10159,11455,23247,26242,26482,27453,29113,30126,
#Partially deleted in new
chr2	240713833	240820219	chr2:240713833-240820219	1	-	240717363	240797752	0	48	3573,119,193,153,125,78,201,146,62,134,115,24,106,85,67,109,56,119,91,172,139,86,119,138,179,149,94,73,181,84,107,80,76,80,134,143,79,76,18,66,78,112,179,66,180,77,166,98,	0,4216,5172,5940,7080,7973,8622,9579,10141,11437,12992,14555,23229,26224,26464,27435,29095,30108,31593,31904,32205,33402,36595,44526,46831,47395,48885,49185,49332,51876,53081,53432,55299,55793,57137,59280,60349,62017,68756,69210,69905,71155,72501,73417,74217,75402,83813,106288,
#Partially deleted in new
chr2	240715322	240820219	chr2:240715322-240820219	1	-	240717363	240797752	789624	48	2084,119,193,153,125,78,201,146,62,134,115,106,85,67,109,56,119,91,172,139,86,119,138,179,149,94,73,181,84,107,80,76,80,134,27,143,79,76,18,66,78,112,179,66,180,77,166,98,	0,2727,3683,4451,5591,6484,7133,8090,8652,9948,11503,21740,24735,24975,25946,27606,28619,30104,30415,30716,31913,35106,43037,45342,45906,47396,47696,47843,50387,51592,51943,53810,54304,55648,57247,57791,58860,60528,67267,67721,68416,69666,71012,71928,72728,73913,82324,104799,
#Partially deleted in new
chr2	240715710	240820212	chr2:240715710-240820212	1	-	240717363	240797752	8553170	49	1696,119,193,153,125,78,201,146,62,134,115,27,106,85,67,109,56,119,91,172,139,86,119,138,179,149,94,73,181,84,107,80,76,80,134,27,143,79,76,18,66,78,112,179,66,180,77,166,91,	0,2339,3295,4063,5203,6096,6745,7702,8264,9560,11115,19008,21352,24347,24587,25558,27218,28231,29716,30027,30328,31525,34718,42649,44954,45518,47008,47308,47455,49999,51204,51555,53422,53916,55260,56859,57403,58472,60140,66879,67333,68028,69278,70624,71540,72340,73525,81936,104411,
#Partially deleted in new
chr2	240716668	240820211	chr2:240716668-240820211	1	-	240717363	240797752	8553170	48	738,119,193,153,125,78,201,146,62,134,115,27,106,85,67,109,56,119,91,172,139,86,119,138,179,149,94,73,181,84,107,80,76,80,134,143,79,76,18,66,78,112,179,66,180,77,166,90,	0,1381,2337,3105,4245,5138,5787,6744,7306,8602,10157,18050,20394,23389,23629,24600,26260,27273,28758,29069,29370,30567,33760,41691,43996,44560,46050,46350,46497,49041,50246,50597,52464,52958,54302,56445,57514,59182,65921,66375,67070,68320,69666,70582,71382,72567,80978,103453,
#Partially deleted in new
chr2	240716975	240821036	chr2:240716975-240821036	1	-	240717363	240797752	8553170	48	431,119,193,153,125,78,201,146,62,134,115,106,85,67,109,56,119,91,172,139,86,119,276,138,179,149,94,73,181,84,107,80,76,80,134,143,79,76,18,66,78,112,179,66,180,77,166,121,	0,1074,2030,2798,3938,4831,5480,6437,6999,8295,9850,20087,23082,23322,24293,25953,26966,28451,28762,29063,30260,33453,40343,41384,43689,44253,45743,46043,46190,48734,49939,50290,52157,52651,53995,56138,57207,58875,65614,66068,66763,68013,69359,70275,71075,72260,80671,103940,
#Partially deleted in new
chr2	240716982	240821025	chr2:240716982-240821025	1	-	240717363	240797752	8553170	47	424,119,193,153,125,78,201,146,62,134,115,106,85,67,109,56,119,91,172,139,86,119,138,179,149,94,73,181,84,107,80,76,80,134,143,79,76,18,66,78,112,179,66,180,77,166,110,	0,1067,2023,2791,3931,4824,5473,6430,6992,8288,9843,20080,23075,23315,24286,25946,26959,28444,28755,29056,30253,33446,41377,43682,44246,45736,46036,46183,48727,49932,50283,52150,52644,53988,56131,57200,58868,65607,66061,66756,68006,69352,70268,71068,72253,80664,103933,
#Partially deleted in new
chr2	240716992	240820212	chr2:240716992-240820212	1	-	240717363	240797752	8553170	48	414,119,193,153,125,78,201,146,62,134,115,106,85,67,109,56,119,91,172,139,86,119,138,179,149,94,73,181,84,107,80,76,80,209,27,143,79,76,18,66,78,112,179,66,180,77,166,91,	0,1057,2013,2781,3921,4814,5463,6420,6982,8278,9833,20070,23065,23305,24276,25936,26949,28434,28745,29046,30243,33436,41367,43672,44236,45726,46026,46173,48717,49922,50273,52140,52634,53978,55577,56121,57190,58858,65597,66051,66746,67996,69342,70258,71058,72243,80654,103129,
#Partially deleted in new
chr2	240717004	240820212	chr2:240717004-240820212	1	-	240717363	240797752	8553170	48	402,119,193,153,125,78,201,146,62,134,115,106,85,67,109,56,119,91,172,139,86,119,276,138,179,149,94,73,181,84,107,80,76,80,134,143,79,76,18,66,78,112,179,66,180,77,166,91,	0,1045,2001,2769,3909,4802,5451,6408,6970,8266,9821,20058,23053,23293,24264,25924,26937,28422,28733,29034,30231,33424,40314,41355,43660,44224,45714,46014,46161,48705,49910,50261,52128,52622,53966,56109,57178,58846,65585,66039,66734,67984,69330,70246,71046,72231,80642,103117,
#Partially deleted in new
chr2	240717082	240776183	chr2:240717082-240776183	0	-	240717082	240717082	8553170	37	324,119,193,153,125,78,201,146,62,134,115,106,85,67,109,56,119,91,172,139,86,119,138,179,149,94,73,181,84,107,80,76,80,134,143,79,333,	0,967,1923,2691,3831,4724,5373,6330,6892,8188,9743,19980,22975,23215,24186,25846,26859,28344,28655,28956,30153,33346,41277,43582,44146,45636,45936,46083,48627,49832,50183,52050,52544,53888,56031,57100,58768,
#Partially deleted in new
chr2	240717095	240782607	chr2:240717095-240782607	0	-	240717363	240782607	8553170	40	311,119,193,153,125,78,201,146,62,134,115,24,106,85,67,109,56,119,91,172,139,86,119,138,179,149,94,73,181,84,107,80,76,80,209,27,143,79,76,18,	0,954,1910,2678,3818,4711,5360,6317,6879,8175,9730,11293,19967,22962,23202,24173,25833,26846,28331,28642,28943,30140,33333,41264,43569,44133,45623,45923,46070,48614,49819,50170,52037,52531,53875,55474,56018,57087,58755,65494,
#Partially deleted in new
chr2	240717182	240745880	chr2:240717182-240745880	0	-	240717363	240745880	789624	21	224,119,193,153,125,78,201,146,62,134,115,24,27,106,85,67,109,56,119,91,143,	0,867,1823,2591,3731,4624,5273,6230,6792,8088,9643,11206,17536,19880,22875,23115,24086,25746,26759,28244,28555,
#Partially deleted in new
chr2	240717363	240820308	chr2:240717363-240820308	1	-	240717363	240797752	789624	50	43,119,193,153,125,78,201,146,62,134,115,24,106,85,67,109,56,119,91,172,139,86,119,276,138,179,149,94,73,181,84,107,80,76,80,134,27,143,79,76,18,66,78,112,179,66,180,77,166,187,	0,686,1642,2410,3550,4443,5092,6049,6611,7907,9462,11025,19699,22694,22934,23905,25565,26578,28063,28374,28675,29872,33065,39955,40996,43301,43865,45355,45655,45802,48346,49551,49902,51769,52263,53607,55206,55750,56819,58487,65226,65680,66375,67625,68971,69887,70687,71872,80283,102758,
#Deleted in new
chr2	240719148	240720285	chr2:240719148-240720285	0	-	240719148	240719148	8553170	2	50,512,	0,625,
#Deleted in new
chr2	240720626	240723436	chr2:240720626-240723436	0	-	240720626	240720626	8553170	4	412,78,201,24,	0,1180,1829,2786,
#Partially deleted in new
chr2	240726707	240820219	chr2:240726707-240820219	0	-	240726707	240726707	8553170	37	233,106,85,67,109,56,119,91,172,139,86,119,138,179,149,94,73,181,84,107,80,76,80,134,143,79,76,18,66,78,112,179,66,180,77,166,98,	0,10355,13350,13590,14561,16221,17234,18719,19030,19331,20528,23721,31652,33957,34521,36011,36311,36458,39002,40207,40558,42425,42919,44263,46406,47475,49143,55882,56336,57031,58281,59627,60543,61343,62528,70939,93414,
#Deleted in new
chr2	240726837	240737542	chr2:240726837-240737542	0	-	240726837	240726837	8553170	2	103,480,	0,10225,
#Deleted in new
chr2	240744052	240748718	chr2:240744052-240748718	0	-	240744052	240744052	8553170	6	8,91,172,139,86,54,	0,1374,1685,1986,3183,4612,
#Partially deleted in new
chr2	240757729	240820212	chr2:240757729-240820212	0	-	240757729	240757729	8553170	26	768,179,149,94,73,181,84,107,80,76,80,209,27,143,79,76,18,66,78,112,179,66,180,77,166,91,	0,2935,3499,4989,5289,5436,7980,9185,9536,11403,11897,13241,14840,15384,16453,18121,24860,25314,26009,27259,28605,29521,30321,31506,39917,62392,
#Deleted in new
chr2	240769669	240771304	chr2:240769669-240771304	0	-	240769669	240769669	8553170	2	37,334,	0,1301,
#Partially deleted in new
chr2	240770975	240820945	chr2:240770975-240820945	0	-	240770975	240797752	789624	15	129,27,143,79,76,18,66,78,112,179,66,180,77,166,30,	0,1594,2138,3207,4875,11614,12068,12763,14013,15359,16275,17075,18260,26671,49940,
#Partially deleted in new
chr2	240771044	240782120	chr2:240771044-240782120	0	-	240771044	240771044	8553170	5	60,143,79,76,75,	0,2069,3138,4806,11001,
#Partially deleted in new
chr2	240771080	240780660	chr2:240771080-240780660	0	-	240771080	240771080	8553170	5	24,143,79,76,144,	0,2033,3102,4770,9436,
#Partially deleted in new
chr2	240774534	240820217	chr2:240774534-240820217	0	-	240774534	240774534	8553170	11	1392,18,66,78,112,179,66,180,77,166,96,	0,8055,8509,9204,10454,11800,12716,13516,14701,23112,45587,
#Partially deleted in new
chr2	240788116	240818966	chr2:240788116-240818966	0	-	240788116	240797752	8553170	4	114,77,166,224,	0,1119,9530,30626,
#Partially deleted in new
chr2	240789303	240818978	chr2:240789303-240818978	0	-	240789303	240797752	789624	4	9,166,99,311,	0,8343,8631,29364,
#Deleted in new
chr2	240868478	240879120	chr2:240868478-240879120	3	+	240868865	240878821	0	11	552,193,65,101,71,85,96,70,96,129,407,	0,691,2165,2870,4500,5499,6630,7456,9058,9543,10235,
#Deleted in new
chr2	240868845	240873468	chr2:240868845-240873468	0	+	240868845	240868845	8553170	5	185,193,65,101,490,	0,324,1798,2503,4133,
#Deleted in new
chr2	240871188	240876013	chr2:240871188-240876013	0	+	240871188	240871188	8553170	4	261,71,96,79,	0,1790,3920,4746,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	240876912	240880502	chr2:240876912-240880502	0	+	240876912	240876912	8553170	3	720,129,1789,	0,1109,1801,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	240886047	240892035	chr2:240886047-240892035	1	-	240887069	240891939	789624	5	1115,357,154,226,106,	0,2244,3957,5490,5882,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	240886048	240892038	chr2:240886048-240892038	1	-	240887069	240891939	789624	5	1114,357,154,226,166,	0,2243,3956,5489,5824,
#Partially deleted in new
chr2	240886661	240896156	chr2:240886661-240896156	3	-	240887069	240895997	789624	5	501,357,154,226,673,	0,1630,3343,4876,8822,
#Deleted in new
chr2	240895599	240896889	chr2:240895599-240896889	0	-	240895599	240895997	789624	2	468,81,	0,1209,
#Deleted in new
chr2	240895642	240896852	chr2:240895642-240896852	0	-	240895642	240895967	789624	2	327,44,	0,1166,
#Partially deleted in new
chr2	240906329	240993311	chr2:240906329-240993311	3	+	240906513	240993081	789624	32	262,151,152,107,157,104,198,97,207,212,183,145,147,231,194,119,170,183,114,144,218,160,138,358,185,121,134,150,132,180,83,246,	0,12396,13653,16209,19394,23836,24601,25988,26372,26801,27340,28001,28586,29028,39730,42649,43203,44004,49529,52971,57226,58136,59051,59306,59895,61015,61799,76550,82409,83324,84866,86736,
#Deleted in new
chr2	240932518	240933317	chr2:240932518-240933317	0	+	240932518	240932518	8553170	2	390,187,	0,612,
#Deleted in new
chr2	240949654	240950929	chr2:240949654-240950929	0	+	240949654	240949654	8553170	2	48,596,	0,679,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr2	240954616	240967451	chr2:240954616-240967451	3	-	240954616	240954616	5263520	9	883,23,91,256,46,179,483,188,125,	0,1228,1753,2745,4460,4623,8647,9372,12710,
#Deleted in new
chr2	240955023	240959354	chr2:240955023-240959354	0	-	240955023	240955023	8553170	5	292,91,256,46,115,	0,1346,2338,4053,4216,
#Deleted in new
chr2	240959095	240959800	chr2:240959095-240959800	0	-	240959095	240959095	8553170	2	27,561,	0,144,
#Deleted in new
chr2	240981514	240986072	chr2:240981514-240986072	3	-	240981514	240981514	8553170	2	2171,174,	0,4384,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr2	240998837	241095568	chr2:240998837-241095568	3	+	240998837	241088401	789624	32	213,288,141,163,126,114,114,114,126,105,114,117,117,117,114,174,114,114,114,114,297,184,113,282,145,83,99,117,88,84,38,3931,	0,31446,34897,35730,37952,38402,41237,41462,49477,49824,50184,50979,52906,53203,53517,54315,63953,64749,65174,66006,66461,68926,70073,71082,72738,72958,74428,82839,83439,88554,89527,92800,
#Partially deleted in new
chr2	240998837	241073986	chr2:240998837-241073986	1	+	240998837	241073423	789624	27	213,288,141,163,126,114,114,114,126,105,114,117,117,117,114,174,114,114,114,114,297,184,113,282,145,83,721,	0,31446,34897,35730,37952,38402,41237,41462,49477,49824,50184,50979,52906,53203,53517,54315,63953,64749,65174,66006,66461,68926,70073,71082,72738,72958,74428,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr2	240998837	241095563	chr2:240998837-241095563	1	+	240998837	241088401	789624	30	213,288,141,163,126,114,114,114,126,105,114,117,117,117,114,174,114,114,114,114,297,184,113,282,145,83,117,88,38,3926,	0,31446,34897,35730,37952,38402,41237,41462,49477,49824,50184,50979,52906,53203,53517,54315,63953,64749,65174,66006,66461,68926,70073,71082,72738,72958,82839,83439,89527,92800,
#Deleted in new
chr2	241010044	241010744	chr2:241010044-241010744	3	-	241010044	241010044	8553170	2	380,48,	0,652,
#Partially deleted in new
chr2	241015598	241064116	chr2:241015598-241064116	3	-	241015598	241015598	8553170	3	419,103,37,	0,17902,48481,
#Deleted in new
chr2	241035533	241040381	chr2:241035533-241040381	0	+	241035533	241035533	8553170	5	142,126,114,114,82,	0,1256,1706,4541,4766,
#Partially deleted in new
chr2	241037219	241051819	chr2:241037219-241051819	0	+	241037219	241051819	789624	8	134,114,114,126,105,114,117,76,	0,2855,3080,11095,11442,11802,12597,14524,
#Partially deleted in new
chr2	241037335	241050041	chr2:241037335-241050041	0	+	241037335	241050041	789624	7	18,114,114,126,105,114,225,	0,2739,2964,10979,11326,11686,12481,
#Partially deleted in new
chr2	241040115	241041362	chr2:241040115-241041362	0	+	241040115	241040899	789624	3	73,114,477,	0,184,770,
#Deleted in new
chr2	241048330	241053326	chr2:241048330-241053326	0	+	241048330	241048330	8553170	8	110,105,114,117,117,112,114,174,	0,331,691,1486,3413,3715,4024,4822,
#Deleted in new
chr2	241051276	241052394	chr2:241051276-241052394	0	+	241051276	241051276	8553170	2	584,354,	0,764,
#Partially deleted in new
chr2	241063377	241087461	chr2:241063377-241087461	1	+	241063510	241087461	789624	12	323,114,114,297,184,113,282,145,83,117,88,70,	0,634,1466,1921,4386,5533,6542,8198,8418,18299,18899,24014,
#Partially deleted in new
chr2	241063377	241091853	chr2:241063377-241091853	0	+	241063377	241063377	8553170	14	323,114,114,297,184,113,282,145,83,117,88,84,38,216,	0,634,1466,1921,4386,5533,6542,8198,8418,18299,18899,24014,24987,28260,
#Deleted in new
chr2	241071405	241075605	chr2:241071405-241075605	0	+	241071405	241071405	8553170	2	315,3810,	0,390,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	241072168	241102332	chr2:241072168-241102332	0	-	241072168	241072168	8553170	5	3514,178,65,156,80,	0,17019,17811,22108,30084,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	241075053	241095673	chr2:241075053-241095673	0	-	241075053	241075053	8553170	4	629,178,65,1397,	0,14134,14926,19223,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	241087093	241102295	chr2:241087093-241102295	0	-	241095997	241102273	0	7	2272,65,156,1309,185,499,43,	0,2886,7183,8036,10149,12302,15159,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr2	241087098	241102295	chr2:241087098-241102295	3	-	241095997	241102273	0	7	2267,65,156,1309,185,499,43,	0,2881,7178,8031,10144,12297,15154,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	241087203	241096070	chr2:241087203-241096070	0	-	241087203	241087203	8553170	4	2162,65,153,1474,	0,2776,7073,7393,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	241087224	241102331	chr2:241087224-241102331	0	-	241087224	241087224	789624	5	2141,65,156,185,79,	0,2755,7052,10018,15028,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	241088904	241102311	chr2:241088904-241102311	0	-	241088904	241088904	8553170	3	461,65,59,	0,1075,13348,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	241089040	241102320	chr2:241089040-241102320	0	-	241089040	241089040	8553170	4	325,65,156,68,	0,939,5236,13212,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	241089272	241102332	chr2:241089272-241102332	0	-	241089272	241089272	8553170	5	93,65,153,185,80,	0,707,5004,7970,12980,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	241090005	241099426	chr2:241090005-241099426	0	-	241090005	241099426	789624	5	39,156,46,185,31,	0,4271,6387,7237,9390,
#Partially deleted in new
chr2	241094405	241102287	chr2:241094405-241102287	0	-	241094405	241102273	789624	3	27,499,35,	0,4990,7847,
#Partially deleted in new
chr2	241095565	241102332	chr2:241095565-241102332	1	-	241095997	241102273	0	4	873,185,499,80,	0,1677,3830,6687,
#Partially deleted in new
chr2	241095868	241102299	chr2:241095868-241102299	1	-	241095997	241097383	789624	3	570,185,47,	0,1374,6384,
#Partially deleted in new
chr2	241096600	241099894	chr2:241096600-241099894	0	-	241096623	241099894	789624	3	113,185,499,	0,642,2795,
#Partially deleted in new
chr2	241096925	241102321	chr2:241096925-241102321	0	-	241096925	241096925	8553170	2	502,69,	0,5327,
#Partially deleted in new
chr2	241097186	241102311	chr2:241097186-241102311	1	-	241097188	241102273	789624	3	241,499,59,	0,2209,5066,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	241099167	241102314	chr2:241099167-241102314	0	-	241099167	241099167	8553170	2	727,62,	0,3085,
#Partially deleted in new
chr2	241099398	241102192	chr2:241099398-241102192	0	-	241099398	241099852	789624	2	496,53,	0,2741,
#Partially deleted in new
chr2	241106098	241149504	chr2:241106098-241149504	1	-	241106565	241143032	0	18	625,147,134,200,135,126,168,185,1256,157,169,261,135,141,171,233,238,91,	0,1254,2068,6141,8944,9189,16633,17850,20097,26775,29772,30905,31854,32555,33786,34422,36738,43315,
#Partially deleted in new
chr2	241106099	241149979	chr2:241106099-241149979	1	-	241106565	241143032	0	19	624,147,134,200,135,126,168,185,1256,157,169,261,135,141,171,233,238,221,23,	0,1253,2067,6140,8943,9188,16632,17849,20096,26774,29771,30904,31853,32554,33785,34421,36737,43508,43857,
#Partially deleted in new
chr2	241106294	241150264	chr2:241106294-241150264	3	-	241106565	241143032	0	18	429,147,134,200,135,126,168,185,1256,157,169,261,135,141,171,233,238,657,	0,1058,1872,5945,8748,8993,16437,17654,19901,26579,29576,30709,31658,32359,33590,34226,36542,43313,
#Deleted in new
chr2	241106294	241109780	chr2:241106294-241109780	0	-	241106294	241106294	8553170	4	429,147,134,1314,	0,1058,1872,2172,
#Partially deleted in new
chr2	241106296	241149435	chr2:241106296-241149435	1	-	241106565	241143032	0	18	427,147,134,200,156,126,168,185,1256,157,169,261,135,141,171,233,238,22,	0,1056,1870,5943,8725,8991,16435,17652,19899,26577,29574,30707,31656,32357,33588,34224,36540,43117,
#Partially deleted in new
chr2	241107459	241112786	chr2:241107459-241112786	0	-	241107459	241107459	8553170	3	40,134,547,	0,707,4780,
#Partially deleted in new
chr2	241107464	241112425	chr2:241107464-241112425	0	-	241107464	241107464	8553170	4	35,134,341,186,	0,702,1002,4775,
#Partially deleted in new
chr2	241113306	241149463	chr2:241113306-241149463	1	-	241114943	241143032	0	14	1871,126,168,185,1256,157,169,261,135,141,171,233,238,50,	0,1981,9425,10642,12889,19567,22564,23697,24646,25347,26578,27214,29530,36107,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	241113634	241134769	chr2:241113634-241134769	0	-	241113634	241113634	8553170	6	1543,126,168,185,1256,1896,	0,1653,9097,10314,12561,19239,
#Deleted in new
chr2	241118724	241118943	chr2:241118724-241118943	7	+	241118724	241118724	16724991	1	219,	0,
#Partially deleted in new
chr2	241126985	241127759	chr2:241126985-241127759	0	-	241126985	241126985	8553170	2	466,52,	0,722,
#Partially deleted in new
chr2	241135875	241149483	chr2:241135875-241149483	0	-	241138774	241143032	789624	6	164,261,135,141,238,70,	0,1128,2077,2778,6961,13538,
#Deleted in new
chr2	241137006	241139595	chr2:241137006-241139595	0	-	241137006	241139595	789624	4	258,135,141,44,	0,946,1647,2545,
#Partially deleted in new
chr2	241137070	241149481	chr2:241137070-241149481	0	-	241137070	241138746	789624	4	194,135,141,68,	0,882,1583,12343,
#Partially deleted in new
chr2	241138751	241140867	chr2:241138751-241140867	0	-	241138751	241138751	8553170	3	43,171,347,	0,1133,1769,
#Partially deleted in new
chr2	241138774	241143032	chr2:241138774-241143032	1	-	241138774	241143032	789624	2	20,196,	0,4062,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	241140573	241149449	chr2:241140573-241149449	0	-	241140573	241143032	789624	4	180,238,111,36,	0,2263,5176,8840,
#Partially deleted in new
chr2	241149575	241169856	chr2:241149575-241169856	0	+	241149704	241169856	789624	9	133,129,56,66,131,163,117,105,76,	0,3900,8231,8908,9637,10756,13709,16761,20205,
#Partially deleted in new
chr2	241149591	241167172	chr2:241149591-241167172	1	+	241149704	241167068	789624	8	117,56,66,131,163,117,105,128,	0,8215,8892,9621,10740,13693,16745,17453,
#Partially deleted in new
chr2	241149612	241182784	chr2:241149612-241182784	0	+	241149704	241182784	789624	9	96,56,66,131,163,117,105,87,138,	0,8194,8871,9600,10719,13672,16724,20168,33034,
#Partially deleted in new
chr2	241149637	241183024	chr2:241149637-241183024	1	+	241150495	241182823	789624	11	71,289,129,56,66,131,163,117,105,87,378,	0,621,3838,8169,8846,9575,10694,13647,16699,20143,33009,
#Partially deleted in new
chr2	241149657	241182985	chr2:241149657-241182985	1	+	241150495	241182823	789624	9	890,56,66,131,163,117,105,87,339,	0,8149,8826,9555,10674,13627,16679,20123,32989,
#Partially deleted in new
chr2	241150021	241183652	chr2:241150021-241183652	3	+	241150495	241182823	789624	10	526,129,56,66,131,163,117,105,87,1006,	0,3454,7785,8462,9191,10310,13263,16315,19759,32625,
#Partially deleted in new
chr2	241150417	241167174	chr2:241150417-241167174	1	+	241150495	241167068	789624	9	130,129,56,48,131,163,117,105,130,	0,3058,7389,8066,8795,9914,12867,15919,16627,
#Partially deleted in new
chr2	241150466	241160433	chr2:241150466-241160433	0	+	241150495	241160433	789624	6	81,129,56,84,131,102,	0,3009,7340,7999,8746,9865,
#Partially deleted in new
chr2	241150466	241158807	chr2:241150466-241158807	0	+	241150466	241150466	8553170	4	81,122,56,324,	0,3016,7340,8017,
#Partially deleted in new
chr2	241150479	241167174	chr2:241150479-241167174	1	+	241150495	241167068	789624	9	68,129,56,66,131,163,117,105,130,	0,2996,7327,8004,8733,9852,12805,15857,16565,
#Partially deleted in new
chr2	241150482	241158794	chr2:241150482-241158794	0	+	241150482	241150482	8553170	4	65,129,56,311,	0,2993,7324,8001,
#Partially deleted in new
chr2	241150483	241158923	chr2:241150483-241158923	0	+	241150483	241150483	8553170	3	64,56,440,	0,7323,8000,
#Partially deleted in new
chr2	241150495	241167174	chr2:241150495-241167174	1	+	241150495	241167068	789624	8	52,56,66,131,163,117,105,130,	0,7311,7988,8717,9836,12789,15841,16549,
#Partially deleted in new
chr2	241151473	241159303	chr2:241151473-241159303	0	+	241151473	241159303	789624	5	79,129,56,66,91,	0,2002,6333,7010,7739,
#Partially deleted in new
chr2	241153481	241182846	chr2:241153481-241182846	0	+	241153481	241182823	789624	9	123,56,48,131,163,117,105,87,200,	0,4325,5002,5731,6850,9803,12855,16299,29165,
#Partially deleted in new
chr2	241155017	241160421	chr2:241155017-241160421	0	+	241155017	241155017	8553170	5	247,56,48,131,90,	0,2789,3466,4195,5314,
#Partially deleted in new
chr2	241155072	241166439	chr2:241155072-241166439	0	+	241155072	241155072	8553170	7	192,56,66,131,163,117,103,	0,2734,3411,4140,5259,8212,11264,
#Partially deleted in new
chr2	241159136	241182740	chr2:241159136-241182740	0	+	241159136	241159136	8553170	6	207,163,117,105,87,94,	0,1195,4148,7200,10644,23510,
#Deleted in new
chr2	241166340	241169892	chr2:241166340-241169892	0	+	241166340	241166340	8553170	2	101,112,	0,3440,
#Partially deleted in new
chr2	241169797	241183652	chr2:241169797-241183652	0	+	241169797	241183463	789624	3	70,170,274,	0,12849,13581,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr2	241188508	241225376	chr2:241188508-241225376	3	+	241188611	241224153	789624	25	258,115,58,143,108,137,58,111,166,91,97,144,138,99,103,112,55,98,146,206,143,91,120,51,1280,	0,1548,2685,7194,10807,11580,12789,13685,14824,16356,19065,20776,20989,21786,21959,23585,24063,26296,27584,29177,29730,34677,35153,35396,35588,
#Partially deleted in new
chr2	241188508	241196168	chr2:241188508-241196168	1	+	241188611	241195917	789624	4	258,115,58,463,	0,1548,2685,7197,
#Partially deleted in new
chr2	241188611	241223357	chr2:241188611-241223357	1	+	241188611	241223357	789624	22	155,115,58,140,108,137,58,111,166,91,97,144,138,99,103,112,55,98,146,206,143,172,	0,1445,2582,7094,10704,11477,12686,13582,14721,16253,18962,20673,20886,21683,21856,23482,23960,26193,27481,29074,29627,34574,
#Deleted in new
chr2	241199096	241200178	chr2:241199096-241200178	0	+	241199096	241199096	8553170	2	327,90,	0,992,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	241212147	241212876	chr2:241212147-241212876	0	+	241212147	241212147	8553170	2	58,305,	0,424,
#Partially deleted in new
chr2	241217614	241223705	chr2:241217614-241223705	0	+	241217614	241223705	789624	4	277,143,91,44,	0,624,5571,6047,
#Partially deleted in new
chr2	241218184	241225184	chr2:241218184-241225184	0	+	241218184	241218184	8553170	2	197,1999,	0,5001,
#Partially deleted in new
chr2	241218272	241225245	chr2:241218272-241225245	0	+	241218272	241218272	8553170	4	109,596,51,1149,	0,4913,5632,5824,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	241218293	241225377	chr2:241218293-241225377	0	+	241218293	241218293	8553170	3	88,770,1281,	0,4892,5803,
#Partially deleted in new
chr2	241227263	241272886	chr2:241227263-241272886	1	-	241229600	241266869	789624	28	2424,129,117,186,144,135,105,155,139,219,222,219,132,87,114,105,140,79,105,108,207,216,207,216,158,113,65,126,	0,2569,2889,3495,6556,7857,8226,9351,11385,12338,12637,15196,19488,19792,20739,20980,22577,25693,26129,27787,28110,28920,29336,35447,37184,39530,41213,45497,
#Partially deleted in new
chr2	241227266	241272831	chr2:241227266-241272831	1	-	241229600	241267648	789624	28	2421,129,117,186,144,135,105,155,139,219,222,219,132,87,114,105,140,79,105,108,216,207,216,158,113,131,65,71,	0,2566,2886,3492,6553,7854,8223,9348,11382,12335,12634,15193,19485,19789,20736,20977,22574,25690,26126,27784,28917,29333,35444,37181,39527,40311,41210,45494,
#Partially deleted in new
chr2	241229211	241315842	chr2:241229211-241315842	3	-	241229600	241266869	789624	28	476,129,117,186,144,135,105,155,139,219,222,219,132,87,114,105,140,79,105,108,207,216,207,216,158,113,65,273,	0,621,941,1547,4608,5909,6278,7403,9437,10390,10689,13248,17540,17844,18791,19032,20629,23745,24181,25839,26162,26972,27388,33499,35236,37582,39265,86358,
#Partially deleted in new
chr2	241229211	241315292	chr2:241229211-241315292	1	-	241229600	241266869	789624	28	476,129,117,186,144,135,105,155,139,219,222,219,132,87,114,105,140,79,105,108,207,216,207,216,158,113,65,191,	0,621,941,1547,4608,5909,6278,7403,9437,10390,10689,13248,17540,17844,18791,19032,20629,23745,24181,25839,26162,26972,27388,33499,35236,37582,39265,85890,
#Partially deleted in new
chr2	241229223	241262792	chr2:241229223-241262792	0	-	241229600	241262792	789624	22	464,129,24,111,135,105,155,139,219,222,219,132,87,114,105,140,79,105,108,216,207,82,	0,609,929,4629,5897,6266,7391,9425,10378,10677,13236,17528,17832,18779,19020,20617,23733,24169,25827,26960,27376,33487,
#Partially deleted in new
chr2	241229223	241250937	chr2:241229223-241250937	0	-	241229223	241229223	8553170	14	1046,186,144,474,155,139,219,222,219,132,87,114,105,1097,	0,1535,4596,5897,7391,9425,10378,10677,13236,17528,17832,18779,19020,20617,
#Deleted in new
chr2	241229438	241230848	chr2:241229438-241230848	0	-	241229438	241229438	8553170	4	249,129,201,90,	0,394,630,1320,
#Deleted in new
chr2	241229461	241230824	chr2:241229461-241230824	0	-	241229763	241230824	789624	3	500,117,66,	0,691,1297,
#Deleted in new
chr2	241229482	241229983	chr2:241229482-241229983	0	-	241229482	241229482	8553170	2	205,151,	0,350,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	241230203	241231343	chr2:241230203-241231343	0	-	241230203	241230203	8553170	2	66,585,	0,555,
#Partially deleted in new
chr2	241230774	241236664	chr2:241230774-241236664	0	-	241230774	241230774	8553170	5	170,144,155,105,50,	0,3045,4346,4715,5840,
#Deleted in new
chr2	241235184	241236771	chr2:241235184-241236771	0	-	241235184	241235184	8553170	3	71,105,664,	0,305,923,
#Deleted in new
chr2	241235204	241239736	chr2:241235204-241239736	0	-	241235204	241235204	8553170	5	51,140,155,139,135,	0,285,1410,3444,4397,
#Partially deleted in new
chr2	241238292	241242540	chr2:241238292-241242540	0	-	241238292	241238292	8553170	4	495,219,222,81,	0,1309,1608,4167,
#Partially deleted in new
chr2	241238678	241246864	chr2:241238678-241246864	0	-	241238678	241246864	789624	5	109,219,264,219,113,	0,923,1222,3781,8073,
#Partially deleted in new
chr2	241239810	241242790	chr2:241239810-241242790	0	-	241239810	241239810	8553170	3	10,222,331,	0,90,2649,
#Partially deleted in new
chr2	241239991	241243688	chr2:241239991-241243688	0	-	241239991	241239991	8553170	3	131,219,140,	0,2468,3557,
#Partially deleted in new
chr2	241240017	241249396	chr2:241240017-241249396	0	-	241240017	241249396	789624	7	105,219,132,87,114,105,39,	0,2442,6734,7038,7985,8226,9340,
#Deleted in new
chr2	241246569	241248043	chr2:241246569-241248043	0	-	241246569	241246569	8553170	3	314,87,41,	0,486,1433,
#Deleted in new
chr2	241246663	241247417	chr2:241246663-241247417	0	-	241246663	241246663	8553170	2	220,362,	0,392,
#Partially deleted in new
chr2	241248243	241255400	chr2:241248243-241255400	0	-	241248243	241248243	8553170	3	105,140,350,	0,1597,6807,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	241248248	241250996	chr2:241248248-241250996	0	-	241248248	241248248	8553170	3	100,140,830,	0,1592,1918,
#Partially deleted in new
chr2	241248328	241255445	chr2:241248328-241255445	0	-	241248328	241248328	8553170	4	20,140,108,72,	0,1512,6722,7045,
#Partially deleted in new
chr2	241252964	241262862	chr2:241252964-241262862	0	-	241252964	241262862	789624	7	71,105,108,138,216,207,152,	0,428,2086,2409,3219,3635,9746,
#Partially deleted in new
chr2	241252999	241255548	chr2:241252999-241255548	0	-	241252999	241252999	8553170	3	36,105,498,	0,393,2051,
#Deleted in new
chr2	241255327	241256708	chr2:241255327-241256708	0	-	241255327	241255327	8553170	3	253,216,109,	0,856,1272,
#Partially deleted in new
chr2	241256382	241268694	chr2:241256382-241268694	0	-	241256382	241266869	789624	6	17,207,216,158,113,218,	0,217,6328,8065,10411,12094,
#Partially deleted in new
chr2	241256393	241315675	chr2:241256393-241315675	0	-	241256393	241266869	789624	9	6,207,216,158,113,65,152,73,106,	0,206,6317,8054,10400,12083,12560,12807,59176,
#Partially deleted in new
chr2	241256713	241273117	chr2:241256713-241273117	0	-	241256713	241266869	789624	6	93,58,158,113,65,82,	0,6155,7734,10080,11763,16322,
#Partially deleted in new
chr2	241256764	241272820	chr2:241256764-241272820	0	-	241256764	241266869	789624	7	42,216,158,113,65,342,60,	0,5946,7683,10029,11712,12189,15996,
#Partially deleted in new
chr2	241262719	241271971	chr2:241262719-241271971	0	-	241262719	241266869	789624	5	207,158,113,65,55,	0,1728,4074,5757,9197,
#Partially deleted in new
chr2	241262735	241302724	chr2:241262735-241302724	0	-	241262735	241266869	789624	5	191,158,113,65,85,	0,1712,4058,5741,39904,
#Partially deleted in new
chr2	241262781	241315203	chr2:241262781-241315203	0	-	241262781	241266869	789624	6	145,158,113,65,125,102,	0,1666,4012,5695,6047,52320,
#Partially deleted in new
chr2	241262870	241272831	chr2:241262870-241272831	0	-	241262870	241266869	789624	6	56,158,113,131,65,71,	0,1577,3923,4707,5606,9890,
#Partially deleted in new
chr2	241262915	241315672	chr2:241262915-241315672	0	-	241262915	241266869	789624	6	11,158,113,131,65,103,	0,1532,3878,4662,5561,52654,
#Partially deleted in new
chr2	241262916	241315672	chr2:241262916-241315672	0	-	241262916	241266869	789624	6	10,158,113,65,95,103,	0,1531,3877,5560,6284,52653,
#Partially deleted in new
chr2	241262923	241317061	chr2:241262923-241317061	0	-	241262923	241266869	789624	5	3,158,113,65,191,	0,1524,3870,5553,53947,
#Partially deleted in new
chr2	241264448	241272863	chr2:241264448-241272863	0	-	241264448	241264557	789624	5	157,91,113,65,103,	0,2088,2345,4028,8312,
#Partially deleted in new
chr2	241264474	241315702	chr2:241264474-241315702	0	-	241264474	241266869	789624	5	131,113,117,65,133,	0,2319,3117,4002,51095,
#Partially deleted in new
chr2	241264520	241272833	chr2:241264520-241272833	0	-	241264520	241266869	789624	6	85,113,65,152,90,73,	0,2273,3956,4433,4685,8240,
#Partially deleted in new
chr2	241264541	241272813	chr2:241264541-241272813	0	-	241264541	241266869	789624	5	64,113,65,125,53,	0,2252,3935,4287,8219,
#Partially deleted in new
chr2	241266811	241272812	chr2:241266811-241272812	0	-	241266811	241266869	789624	5	95,65,152,95,52,	0,1665,2142,2389,5949,
#Partially deleted in new
chr2	241266817	241272834	chr2:241266817-241272834	0	-	241266817	241266869	789624	4	89,65,338,74,	0,1659,2140,5943,
#Partially deleted in new
chr2	241266826	241315702	chr2:241266826-241315702	0	-	241266826	241266869	789624	5	80,65,152,95,133,	0,1650,2127,2374,48743,
#Partially deleted in new
chr2	241266865	241315726	chr2:241266865-241315726	0	-	241266865	241266865	8553170	4	41,65,201,157,	0,1611,2495,48704,
#Deleted in new
chr2	241268498	241272831	chr2:241268498-241272831	0	-	241268498	241268498	8553170	3	43,467,71,	0,330,4262,
#Partially deleted in new
chr2	241269172	241315820	chr2:241269172-241315820	0	-	241269172	241269172	8553170	2	123,251,	0,46397,
#Partially deleted in new
chr2	241315099	241354024	chr2:241315099-241354024	3	+	241324232	241350174	0	13	511,26,121,87,124,135,118,102,146,84,58,131,2058,	0,9116,10893,20026,20875,22282,22573,27892,28652,31066,33034,34973,36867,
#Partially deleted in new
chr2	241315269	241343070	chr2:241315269-241343070	0	+	241326103	241343070	789624	7	341,121,87,124,135,118,79,	0,10723,19856,20705,22112,22403,27722,
#Partially deleted in new
chr2	241315269	241337734	chr2:241315269-241337734	0	+	241315269	241315269	8553170	6	341,26,87,124,135,62,	0,8946,19856,20705,22112,22403,
#Partially deleted in new
chr2	241315288	241354024	chr2:241315288-241354024	1	+	241324232	241350174	0	14	322,101,26,121,87,124,135,118,102,146,84,58,131,2058,	0,2210,8927,10704,19837,20686,22093,22384,27703,28463,30877,32845,34784,36678,
#Partially deleted in new
chr2	241315354	241336160	chr2:241315354-241336160	0	+	241326103	241336160	789624	4	256,121,87,186,	0,10638,19771,20620,
#Partially deleted in new
chr2	241315354	241335146	chr2:241315354-241335146	0	+	241324232	241335146	789624	6	256,119,101,26,121,21,	0,1067,2144,8861,10638,19771,
#Partially deleted in new
chr2	241315354	241335212	chr2:241315354-241335212	0	+	241324232	241335212	789624	5	256,85,26,121,87,	0,4848,8861,10638,19771,
#Partially deleted in new
chr2	241315446	241337452	chr2:241315446-241337452	0	+	241315446	241315446	8553170	5	164,121,87,140,71,	0,10546,19679,20512,21935,
#Partially deleted in new
chr2	241315860	241354027	chr2:241315860-241354027	1	+	241324232	241350174	0	13	122,26,121,87,124,135,118,102,146,84,58,131,2061,	0,8355,10132,19265,20114,21521,21812,27131,27891,30305,32273,34212,36106,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	241315860	241336926	chr2:241315860-241336926	0	+	241315860	241315860	8553170	5	122,26,87,124,142,	0,8355,19265,20114,20924,
#Partially deleted in new
chr2	241315860	241354024	chr2:241315860-241354024	1	+	241316467	241350174	0	14	122,134,26,121,87,124,135,118,102,146,84,58,131,2058,	0,561,8355,10132,19265,20114,21521,21812,27131,27891,30305,32273,34212,36106,
#Partially deleted in new
chr2	241315863	241335599	chr2:241315863-241335599	0	+	241315863	241315863	8553170	4	119,26,121,474,	0,8352,10129,19262,
#Partially deleted in new
chr2	241315874	241336381	chr2:241315874-241336381	0	+	241315874	241315874	8553170	5	108,26,121,87,407,	0,8341,10118,19251,20100,
#Partially deleted in new
chr2	241315881	241352109	chr2:241315881-241352109	1	+	241324232	241350174	0	17	101,119,101,108,26,121,87,30,124,135,118,102,146,84,58,131,143,	0,540,1617,2355,8334,10111,19244,19440,20093,21500,21791,27110,27870,30284,32252,34191,36085,
#Partially deleted in new
chr2	241315881	241337711	chr2:241315881-241337711	0	+	241315881	241315881	8553170	5	101,87,124,135,39,	0,19244,20093,21500,21791,
#Partially deleted in new
chr2	241315882	241354027	chr2:241315882-241354027	1	+	241326103	241350174	789624	12	100,121,87,124,135,118,102,146,84,58,131,2061,	0,10110,19243,20092,21499,21790,27109,27869,30283,32251,34190,36084,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	241315893	241325244	chr2:241315893-241325244	0	+	241315893	241315893	8553170	5	89,111,101,26,836,	0,536,1605,8322,8515,
#Partially deleted in new
chr2	241315900	241337495	chr2:241315900-241337495	0	+	241324232	241335984	789624	6	82,26,121,87,140,114,	0,8315,10092,19225,20058,21481,
#Partially deleted in new
chr2	241315904	241337485	chr2:241315904-241337485	0	+	241324232	241337485	789624	8	78,134,101,26,121,87,124,104,	0,517,1594,8311,10088,19221,20070,21477,
#Partially deleted in new
chr2	241315905	241337448	chr2:241315905-241337448	0	+	241320245	241337448	789624	6	77,85,121,87,124,67,	0,4297,10087,19220,20069,21476,
#Partially deleted in new
chr2	241315905	241342999	chr2:241315905-241342999	0	+	241315905	241315905	8553170	6	77,87,140,135,118,8,	0,19220,20053,21476,21767,27086,
#Partially deleted in new
chr2	241315912	241337790	chr2:241315912-241337790	0	+	241315912	241315912	8553170	6	70,26,87,140,135,118,	0,8303,19213,20046,21469,21760,
#Partially deleted in new
chr2	241315920	241336073	chr2:241315920-241336073	0	+	241324232	241336073	789624	6	62,85,26,121,87,99,	0,4282,8295,10072,19205,20054,
#Partially deleted in new
chr2	241315923	241343026	chr2:241315923-241343026	0	+	241315923	241315923	8553170	7	59,26,87,124,135,118,35,	0,8292,19202,20051,21458,21749,27068,
#Partially deleted in new
chr2	241315927	241354027	chr2:241315927-241354027	1	+	241324232	241350174	0	14	55,85,26,121,87,124,135,118,102,146,84,58,131,2061,	0,4275,8288,10065,19198,20047,21454,21745,27064,27824,30238,32206,34145,36039,
#Partially deleted in new
chr2	241315934	241335640	chr2:241315934-241335640	0	+	241315934	241315934	8553170	2	48,515,	0,19191,
#Partially deleted in new
chr2	241315935	241336336	chr2:241315935-241336336	0	+	241315935	241315935	8553170	5	47,26,121,87,378,	0,8280,10057,19190,20023,
#Partially deleted in new
chr2	241315943	241335210	chr2:241315943-241335210	0	+	241324232	241335210	789624	5	39,101,26,121,85,	0,1555,8272,10049,19182,
#Partially deleted in new
chr2	241315943	241343809	chr2:241315943-241343809	0	+	241315943	241315943	8553170	7	39,26,87,135,118,102,58,	0,8272,19182,21438,21729,27048,27808,
#Partially deleted in new
chr2	241315945	241337557	chr2:241315945-241337557	0	+	241315945	241315945	8553170	6	37,26,121,87,124,176,	0,8270,10047,19180,20029,21436,
#Partially deleted in new
chr2	241315950	241337679	chr2:241315950-241337679	0	+	241326103	241337679	789624	7	32,26,147,87,124,135,7,	0,8265,10016,19175,20024,21431,21722,
#Partially deleted in new
chr2	241315952	241337433	chr2:241315952-241337433	0	+	241324232	241337433	789624	7	30,134,26,121,87,124,52,	0,469,8263,10040,19173,20022,21429,
#Deleted in new
chr2	241315958	241317538	chr2:241315958-241317538	0	+	241315958	241315958	8553170	3	24,154,40,	0,463,1540,
#Partially deleted in new
chr2	241316002	241326051	chr2:241316002-241326051	0	+	241324232	241326051	789624	4	538,101,26,59,	0,1496,8213,9990,
#Partially deleted in new
chr2	241316169	241335151	chr2:241316169-241335151	0	+	241324232	241335151	789624	6	146,119,101,26,121,26,	0,252,1329,8046,9823,18956,
#Partially deleted in new
chr2	241316482	241337447	chr2:241316482-241337447	0	+	241316482	241316482	8553170	5	68,26,87,124,66,	0,7733,18643,19492,20899,
#Partially deleted in new
chr2	241324153	241337716	chr2:241324153-241337716	0	+	241324232	241337716	789624	6	88,121,87,124,135,44,	0,1839,10972,11821,13228,13519,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	241324215	241337098	chr2:241324215-241337098	0	+	241324215	241324215	8553170	5	26,121,87,124,314,	0,1777,10910,11759,12569,
#Partially deleted in new
chr2	241335842	241337765	chr2:241335842-241337765	0	+	241335842	241337765	789624	3	256,135,93,	0,1539,1830,
#Partially deleted in new
chr2	241335945	241337532	chr2:241335945-241337532	0	+	241335945	241335945	8553170	2	153,151,	0,1436,
#Partially deleted in new
chr2	241337310	241343837	chr2:241337310-241343837	0	+	241337310	241337310	8553170	3	480,102,86,	0,5681,6441,
#Partially deleted in new
chr2	241337475	241352188	chr2:241337475-241352188	0	+	241337475	241350174	789624	7	41,118,102,146,58,131,222,	0,197,5516,6276,10658,12597,14491,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	241337719	241346602	chr2:241337719-241346602	0	+	241337719	241337719	8553170	4	71,102,146,437,	0,5272,6032,8446,
#Deleted in new
chr2	241350086	241352626	chr2:241350086-241352626	0	+	241350086	241350174	789624	2	117,684,	0,1856,
#Deleted in new
chr2	241351339	241353104	chr2:241351339-241353104	3	-	241351339	241351339	8553170	2	376,66,	0,1699,
#Partially deleted in new
chr2	241356242	241494841	chr2:241356242-241494841	3	+	241373107	241494125	789624	27	146,207,105,43,79,98,115,148,96,164,69,58,253,176,90,134,82,238,131,69,90,83,119,164,108,152,834,	0,16841,47585,48556,51294,54790,57064,61719,75436,77915,78719,80238,85061,100504,106280,107092,107656,111897,119614,127222,127999,133719,134818,135273,136686,137050,137765,
#Partially deleted in new
chr2	241356288	241465778	chr2:241356288-241465778	1	+	241373107	241465697	789624	18	100,207,105,43,79,98,115,148,96,164,69,58,253,176,90,134,82,105,	0,16795,47539,48510,51248,54744,57018,61673,75390,77869,78673,80192,85015,100458,106234,107046,107610,109385,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	241356294	241405403	chr2:241356294-241405403	0	+	241356294	241356294	8553170	6	94,207,16,105,43,152,	0,16789,39148,47533,48504,48957,
#Partially deleted in new
chr2	241356296	241466030	chr2:241356296-241466030	1	+	241373107	241465510	789624	18	92,207,105,43,79,98,115,148,96,164,69,58,253,176,90,134,82,571,	0,16787,47531,48502,51240,54736,57010,61665,75382,77861,78665,80184,85007,100450,106226,107038,107602,109163,
#Partially deleted in new
chr2	241356298	241395984	chr2:241356298-241395984	0	+	241356298	241356298	8553170	3	90,207,542,	0,16785,39144,
#Partially deleted in new
chr2	241372559	241395644	chr2:241372559-241395644	0	+	241372559	241372559	8553170	3	147,207,202,	0,524,22883,
#Partially deleted in new
chr2	241372677	241407608	chr2:241372677-241407608	0	+	241373107	241407608	789624	5	29,207,105,43,72,	0,406,31150,32121,34859,
#Partially deleted in new
chr2	241372848	241403923	chr2:241372848-241403923	0	+	241373107	241403923	789624	2	442,96,	0,30979,
#Partially deleted in new
chr2	241373081	241403902	chr2:241373081-241403902	0	+	241373081	241373081	8553170	3	209,158,75,	0,14073,30746,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	241373188	241405402	chr2:241373188-241405402	0	+	241373188	241373188	8553170	4	102,105,43,147,	0,30639,31610,32067,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	241386742	241405403	chr2:241386742-241405403	0	+	241386742	241386742	8553170	4	60,158,105,148,	0,412,17085,18513,
#Partially deleted in new
chr2	241410940	241432241	chr2:241410940-241432241	0	+	241410940	241410940	8553170	5	190,115,148,96,31,	0,2366,7021,20738,21270,
#Partially deleted in new
chr2	241410944	241434187	chr2:241410944-241434187	0	+	241410944	241410944	8553170	5	186,115,148,96,30,	0,2362,7017,20734,23213,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	241434229	241447149	chr2:241434229-241447149	0	+	241434229	241442533	789624	4	92,69,58,5846,	0,732,2251,7074,
#Partially deleted in new
chr2	241456434	241463458	chr2:241456434-241463458	0	+	241456434	241456434	8553170	3	488,90,124,	0,6088,6900,
#Partially deleted in new
chr2	241462531	241463525	chr2:241462531-241463525	0	+	241462531	241462531	8553170	2	81,191,	0,803,
#Deleted in new
chr2	241463335	241466036	chr2:241463335-241466036	0	+	241463335	241465697	789624	3	133,82,363,	0,563,2338,
#Partially deleted in new
chr2	241463579	241468320	chr2:241463579-241468320	0	+	241463579	241463579	8553170	2	401,181,	0,4560,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	241477904	241477982	chr2:241477904-241477982	3	+	241477904	241477904	5263520	1	78,	0,
#Partially deleted in new
chr2	241478315	241478993	chr2:241478315-241478993	7	+	241478315	241478315	16724991	1	678,	0,
#Partially deleted in new
chr2	241484089	241491649	chr2:241484089-241491649	0	+	241484089	241484089	8553170	4	242,83,119,134,	0,5872,6971,7426,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	241488147	241494840	chr2:241488147-241494840	0	+	241488147	241488147	8553170	6	1897,119,164,108,152,833,	0,2913,3368,4781,5145,5860,
#Partially deleted in new
chr2	241489960	241494119	chr2:241489960-241494119	0	+	241489960	241494119	789624	5	84,119,164,108,112,	0,1100,1555,2968,4047,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr2	241492673	241508692	chr2:241492673-241508692	3	-	241495661	241508035	0	12	3028,137,72,115,146,186,158,109,57,231,130,250,	0,3724,4942,5561,5965,6315,6583,7499,8066,8804,15332,15769,
#Partially deleted in new
chr2	241493387	241495153	chr2:241493387-241495153	0	-	241493387	241493387	8553170	2	153,311,	0,1455,
#Partially deleted in new
chr2	241493392	241494840	chr2:241493392-241494840	0	+	241493392	241494125	789624	3	52,134,364,	0,615,1084,
#Partially deleted in new
chr2	241494706	241508695	chr2:241494706-241508695	1	-	241495661	241500775	0	11	995,137,72,115,146,186,158,109,57,231,253,	0,1691,2909,3528,3932,4282,4550,5466,6033,6771,13736,
#Partially deleted in new
chr2	241494706	241509572	chr2:241494706-241509572	1	-	241495661	241500775	0	11	995,137,72,115,146,186,158,109,57,231,350,	0,1691,2909,3528,3932,4282,4550,5466,6033,6771,14516,
#Partially deleted in new
chr2	241495016	241508688	chr2:241495016-241508688	1	-	241495661	241508035	0	12	685,137,72,115,146,186,158,109,57,231,130,184,	0,1381,2599,3218,3622,3972,4240,5156,5723,6461,12989,13488,
#Partially deleted in new
chr2	241495018	241508362	chr2:241495018-241508362	1	-	241495661	241508035	0	11	683,137,72,115,146,186,158,109,57,231,357,	0,1379,2597,3216,3620,3970,4238,5154,5721,6459,12987,
#Partially deleted in new
chr2	241495021	241508556	chr2:241495021-241508556	1	-	241495661	241508035	0	11	680,137,72,115,146,186,158,109,57,130,114,	0,1376,2594,3213,3617,3967,4235,5151,5718,12984,13421,
#Deleted in new
chr2	241495045	241496538	chr2:241495045-241496538	0	-	241495045	241495045	8553170	2	656,141,	0,1352,
#Deleted in new
chr2	241495049	241499972	chr2:241495049-241499972	0	-	241495049	241495049	8553170	7	652,137,72,115,146,186,716,	0,1348,2566,3185,3589,3939,4207,
#Partially deleted in new
chr2	241495248	241508584	chr2:241495248-241508584	1	-	241495661	241508035	0	11	453,137,72,115,146,186,158,109,57,130,80,	0,1149,2367,2986,3390,3740,4008,4924,5491,12757,13256,
#Deleted in new
chr2	241495447	241499190	chr2:241495447-241499190	0	-	241495447	241495447	8553170	7	254,137,197,72,115,146,202,	0,950,1734,2168,2787,3191,3541,
#Deleted in new
chr2	241495489	241498249	chr2:241495489-241498249	0	-	241495489	241495489	8553170	5	212,137,79,72,15,	0,908,1810,2126,2745,
#Deleted in new
chr2	241495537	241498732	chr2:241495537-241498732	0	-	241495537	241495537	8553170	4	164,137,72,498,	0,860,2078,2697,
#Deleted in new
chr2	241496395	241500244	chr2:241496395-241500244	0	-	241496425	241500244	789624	6	139,72,146,186,158,72,	0,1220,2243,2593,2861,3777,
#Deleted in new
chr2	241497332	241498332	chr2:241497332-241498332	0	-	241497332	241497332	8553170	2	355,98,	0,902,
#Deleted in new
chr2	241498509	241499320	chr2:241498509-241499320	0	-	241498509	241498509	8553170	3	275,186,64,	0,479,747,
#Partially deleted in new
chr2	241498669	241509298	chr2:241498669-241509298	0	-	241498669	241498669	8553170	5	115,186,158,109,76,	0,319,587,1503,10553,
#Deleted in new
chr2	241498742	241501526	chr2:241498742-241501526	0	-	241498742	241500775	789624	6	42,186,158,109,338,49,	0,246,514,1430,1997,2735,
#Partially deleted in new
chr2	241498988	241508333	chr2:241498988-241508333	0	-	241498988	241508035	789624	4	186,158,109,328,	0,268,1184,9017,
#Partially deleted in new
chr2	241498988	241508624	chr2:241498988-241508624	0	-	241498988	241500775	789624	6	186,158,109,57,231,182,	0,268,1184,1751,2489,9454,
#Partially deleted in new
chr2	241499032	241509326	chr2:241499032-241509326	0	-	241499032	241500775	789624	6	142,158,109,57,231,104,	0,224,1140,1707,2445,10190,
#Partially deleted in new
chr2	241499322	241508595	chr2:241499322-241508595	0	-	241499322	241500775	789624	5	92,109,57,231,91,	0,850,1417,2155,9182,
#Partially deleted in new
chr2	241499386	241508362	chr2:241499386-241508362	0	-	241499386	241508035	789624	6	28,109,57,231,130,45,	0,786,1353,2091,8619,8931,
#Deleted in new
chr2	241499406	241501698	chr2:241499406-241501698	0	-	241499406	241499406	8553170	3	875,57,221,	0,1333,2071,
#Deleted in new
chr2	241499902	241500871	chr2:241499902-241500871	0	-	241499902	241499902	8553170	2	379,132,	0,837,
#Deleted in new
chr2	241500046	241501698	chr2:241500046-241501698	0	-	241500046	241500046	8553170	3	235,57,171,	0,693,1481,
#Partially deleted in new
chr2	241500142	241509730	chr2:241500142-241509730	0	-	241500142	241500775	789624	4	139,57,231,508,	0,597,1335,9080,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	241500171	241502003	chr2:241500171-241502003	0	-	241500171	241500775	789624	4	110,57,231,172,	0,568,1306,1660,
#Partially deleted in new
chr2	241500259	241508332	chr2:241500259-241508332	0	-	241500259	241500775	789624	4	22,108,322,327,	0,480,1218,7746,
#Partially deleted in new
chr2	241500762	241508571	chr2:241500762-241508571	0	-	241500762	241500762	8553170	4	85,231,130,129,	0,715,7243,7680,
#Partially deleted in new
chr2	241500779	241508607	chr2:241500779-241508607	0	-	241500779	241500779	8553170	4	17,322,130,103,	0,698,7226,7725,
#Partially deleted in new
chr2	241500859	241508582	chr2:241500859-241508582	0	-	241500859	241500859	8553170	4	60,231,130,78,	0,618,7146,7645,
#Partially deleted in new
chr2	241501356	241508583	chr2:241501356-241508583	0	-	241501356	241501356	8553170	3	352,130,79,	0,6649,7148,
#Partially deleted in new
chr2	241501392	241508571	chr2:241501392-241508571	0	-	241501392	241508035	789624	3	316,130,129,	0,6613,7050,
#Partially deleted in new
chr2	241501516	241508586	chr2:241501516-241508586	0	-	241501516	241508458	789624	3	192,59,144,	0,2521,6926,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	241544402	241558977	chr2:241544402-241558977	3	-	241544402	241544402	789624	2	442,201,	0,14374,
#Partially deleted in new
chr2	241551423	241562476	chr2:241551423-241562476	0	+	241551423	241551423	8553170	2	54,129,	0,10924,
#Partially deleted in new
chr2	241558720	241574138	chr2:241558720-241574138	3	+	241559483	241572422	0	5	273,249,129,164,1842,	0,734,3627,11404,13576,
#Deleted in new
chr2	241581921	241582726	chr2:241581921-241582726	3	+	241581921	241581921	8553170	1	805,	0,
#Partially deleted in new
chr2	241584404	241617501	chr2:241584404-241617501	1	-	241584605	241617415	0	5	321,104,110,160,90,	0,17491,18565,21909,33007,
#Partially deleted in new
chr2	241584404	241637449	chr2:241584404-241637449	3	-	241584605	241637017	0	6	321,104,110,160,1163,509,	0,17491,18565,21909,48512,52536,
#Partially deleted in new
chr2	241584419	241602170	chr2:241584419-241602170	0	-	241584419	241584419	8553170	2	306,275,	0,17476,
#Partially deleted in new
chr2	241584426	241617490	chr2:241584426-241617490	1	-	241584605	241617415	789624	5	299,185,110,160,79,	0,17388,18543,21887,32985,
#Partially deleted in new
chr2	241584427	241633364	chr2:241584427-241633364	1	-	241584703	241633181	789624	4	290,71,160,448,	0,18581,21886,48489,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	241584967	241585075	chr2:241584967-241585075	7	+	241584967	241584967	16724991	1	108,	0,
#Partially deleted in new
chr2	241591950	241602994	chr2:241591950-241602994	0	-	241591950	241591950	8553170	4	340,98,104,25,	0,2682,9945,11019,
#Partially deleted in new
chr2	241637212	241673854	chr2:241637212-241673854	1	+	241637714	241672205	0	13	512,102,72,99,102,73,80,194,79,146,57,114,1664,	0,13797,14051,16299,17333,18058,21895,29432,30930,31327,33513,34099,34978,
#Partially deleted in new
chr2	241637611	241672628	chr2:241637611-241672628	1	+	241653549	241672264	0	13	113,102,72,99,102,73,80,194,79,146,57,130,438,	0,13398,13652,15900,16934,17659,21496,29033,30531,30928,33114,33700,34579,
#Partially deleted in new
chr2	241637611	241673857	chr2:241637611-241673857	3	+	241637714	241672264	0	13	113,102,72,99,102,73,80,194,79,146,57,94,1667,	0,13398,13652,15900,16934,17659,21496,29033,30531,30928,33114,33700,34579,
#Partially deleted in new
chr2	241637611	241651966	chr2:241637611-241651966	1	+	241637714	241651966	789624	4	113,102,72,83,	0,13398,13652,14272,
#Partially deleted in new
chr2	241637619	241653333	chr2:241637619-241653333	0	+	241637619	241637619	8553170	5	105,102,72,129,27,	0,13390,13644,14264,15687,
#Partially deleted in new
chr2	241637625	241655330	chr2:241637625-241655330	0	+	241637714	241651966	789624	7	99,102,72,91,99,102,60,	0,13384,13638,14258,15886,16920,17645,
#Partially deleted in new
chr2	241637634	241672599	chr2:241637634-241672599	0	+	241637634	241637634	8553170	12	90,102,72,63,99,102,73,194,79,146,57,1288,	0,13375,13629,15672,15877,16911,17636,29010,30508,30905,33091,33677,
#Partially deleted in new
chr2	241637661	241659772	chr2:241637661-241659772	0	+	241637661	241637661	8553170	6	63,102,72,99,102,665,	0,13348,13602,15850,16884,21446,
#Partially deleted in new
chr2	241637692	241655306	chr2:241637692-241655306	0	+	241653549	241655306	789624	7	32,110,102,72,99,102,36,	0,568,13317,13571,15819,16853,17578,
#Partially deleted in new
chr2	241637692	241655444	chr2:241637692-241655444	0	+	241637692	241637692	8553170	6	32,102,72,99,102,174,	0,13317,13571,15819,16853,17578,
#Partially deleted in new
chr2	241637692	241655002	chr2:241637692-241655002	0	+	241637692	241637692	8553170	5	32,102,72,99,457,	0,13317,13571,15819,16853,
#Partially deleted in new
chr2	241637692	241654705	chr2:241637692-241654705	0	+	241637692	241637692	8553170	6	32,102,72,91,99,160,	0,13317,13571,14191,15819,16853,
#Partially deleted in new
chr2	241637696	241659200	chr2:241637696-241659200	0	+	241637696	241637696	8553170	6	28,326,99,102,73,93,	0,13313,15815,16849,17574,21411,
#Partially deleted in new
chr2	241637697	241672631	chr2:241637697-241672631	0	+	241637697	241637697	8553170	13	27,102,72,63,99,102,73,80,194,79,146,57,1320,	0,13312,13566,15609,15814,16848,17573,21410,28947,30445,30842,33028,33614,
#Partially deleted in new
chr2	241637705	241659611	chr2:241637705-241659611	0	+	241637705	241637705	8553170	6	19,102,99,102,73,504,	0,13304,15806,16840,17565,21402,
#Partially deleted in new
chr2	241637706	241659448	chr2:241637706-241659448	0	+	241637714	241659448	789624	7	18,102,72,99,102,73,341,	0,13303,13557,15805,16839,17564,21401,
#Partially deleted in new
chr2	241637709	241668221	chr2:241637709-241668221	0	+	241637714	241668221	789624	7	15,102,72,99,102,194,79,	0,13300,13554,15802,16836,28935,30433,
#Partially deleted in new
chr2	241637709	241653524	chr2:241637709-241653524	0	+	241637714	241651966	789624	6	15,102,72,91,63,13,	0,13300,13554,14174,15597,15802,
#Partially deleted in new
chr2	241637728	241659187	chr2:241637728-241659187	0	+	241653549	241659187	789624	8	32,102,72,63,99,102,73,80,	0,13281,13535,15578,15783,16817,17542,21379,
#Partially deleted in new
chr2	241651006	241672592	chr2:241651006-241672592	0	+	241651006	241653359	789624	13	105,72,63,99,102,73,80,194,79,146,57,94,402,	0,257,2300,2505,3539,4264,8101,15638,17136,17533,19719,20305,21184,
#Partially deleted in new
chr2	241653466	241666769	chr2:241653466-241666769	0	+	241653549	241666769	789624	5	144,102,73,80,125,	0,1079,1804,5641,13178,
#Partially deleted in new
chr2	241666595	241671366	chr2:241666595-241671366	0	+	241666595	241671366	789624	5	243,79,146,57,55,	0,1547,1944,4130,4716,
#Partially deleted in new
chr2	241667811	241671569	chr2:241667811-241671569	0	+	241667811	241667811	8553170	4	410,146,57,258,	0,728,2914,3500,
#Deleted in new
chr2	241668168	241668860	chr2:241668168-241668860	0	+	241668168	241668168	8553170	2	53,321,	0,371,
#Partially deleted in new
chr2	241668258	241673849	chr2:241668258-241673849	0	+	241668258	241668258	8553170	4	427,57,94,1659,	0,2467,3053,3932,
#Deleted in new
chr2	241670560	241671917	chr2:241670560-241671917	0	+	241670560	241670560	8553170	2	222,606,	0,751,
#Partially deleted in new
chr2	241675741	241686991	chr2:241675741-241686991	3	-	241676126	241686783	0	5	496,198,91,109,338,	0,2710,4487,10027,10912,
#Partially deleted in new
chr2	241675746	241686944	chr2:241675746-241686944	0	-	241678636	241686783	789624	4	491,198,109,291,	0,2705,10022,10907,
#Partially deleted in new
chr2	241676119	241686712	chr2:241676119-241686712	0	-	241676126	241686712	789624	5	118,198,34,109,59,	0,2332,8596,9649,10534,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr2	241676122	241686742	chr2:241676122-241686742	0	-	241682227	241686742	789624	5	115,198,415,109,89,	0,2329,5796,9646,10531,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	241682154	241686725	chr2:241682154-241686725	0	-	241682154	241682154	8553170	3	179,71,72,	0,3652,4499,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	241685115	241686781	chr2:241685115-241686781	0	-	241685115	241685115	8553170	2	762,128,	0,1538,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	241687084	241721805	chr2:241687084-241721805	1	+	241690610	241720122	789624	8	978,816,72,167,112,94,130,1830,	0,2753,17568,22131,24292,24893,32398,32891,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	241690413	241694289	chr2:241690413-241694289	0	+	241690413	241690413	8553170	2	240,175,	0,3701,
#Partially deleted in new
chr2	241702034	241712380	chr2:241702034-241712380	0	+	241702034	241702034	8553170	5	68,72,167,112,403,	0,2618,7181,9342,9943,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	241702039	241729478	chr2:241702039-241729478	3	+	241702065	241725031	0	8	63,72,167,112,94,136,62,4490,	0,2613,7176,9337,9938,20899,21170,22949,
#Partially deleted in new
chr2	241702041	241721715	chr2:241702041-241721715	0	+	241702041	241702041	8553170	7	61,72,167,112,94,130,1740,	0,2611,7174,9335,9936,17441,17934,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	241702045	241724036	chr2:241702045-241724036	1	+	241702065	241723791	0	8	57,72,167,112,94,136,62,246,	0,2607,7170,9331,9932,20893,21164,21745,
#Partially deleted in new
chr2	241702045	241711623	chr2:241702045-241711623	0	+	241702045	241702045	8553170	4	57,72,167,247,	0,2607,7170,9331,
#Partially deleted in new
chr2	241702060	241723017	chr2:241702060-241723017	0	+	241702065	241711529	789624	6	42,72,167,208,94,79,	0,2592,7155,9316,9917,20878,
#Partially deleted in new
chr2	241702064	241719919	chr2:241702064-241719919	0	+	241702064	241702064	8553170	6	38,72,167,112,94,437,	0,2588,7151,9312,9913,17418,
#Partially deleted in new
chr2	241709085	241711430	chr2:241709085-241711430	0	+	241709085	241709085	8553170	2	297,54,	0,2291,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	241720740	241724038	chr2:241720740-241724038	0	+	241720740	241720740	8553170	4	690,136,62,248,	0,2198,2469,3050,
#Deleted in new
chr2	241724614	241725693	chr2:241724614-241725693	3	-	241724614	241724614	8553170	2	555,29,	0,1050,
#Partially deleted in new
chr2	241726447	241727806	chr2:241726447-241727806	0	+	241726447	241726447	8553170	2	336,64,	0,1295,
#Deleted in new
chr2	241727767	241728606	chr2:241727767-241728606	0	+	241727767	241727767	8553170	2	178,107,	0,732,
#Partially deleted in new
chr2	241734578	241768811	chr2:241734578-241768811	3	+	241735224	241767969	789624	10	117,384,58,140,194,169,144,143,166,1102,	0,554,6454,7856,9043,10130,15572,16667,21270,33131,
#Partially deleted in new
chr2	241734601	241768809	chr2:241734601-241768809	1	+	241742486	241767969	789624	9	94,58,140,194,169,144,143,166,1100,	0,6431,7833,9020,10107,15549,16644,21247,33108,
#Partially deleted in new
chr2	241734629	241768809	chr2:241734629-241768809	0	+	241735224	241755958	789624	8	66,384,58,140,194,169,166,1100,	0,503,6403,7805,8992,10079,21219,33080,
#Deleted in new
chr2	241734714	241735498	chr2:241734714-241735498	3	-	241734714	241734714	8553170	2	90,382,	0,402,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	241735131	241736243	chr2:241735131-241736243	0	+	241735131	241735131	8553170	2	385,299,	0,813,
#Partially deleted in new
chr2	241742432	241750277	chr2:241742432-241750277	0	+	241742432	241750277	789624	2	142,127,	0,7718,
#Partially deleted in new
chr2	241742474	241751379	chr2:241742474-241751379	0	+	241742474	241751379	789624	2	100,134,	0,8771,
#Partially deleted in new
chr2	241742560	241748903	chr2:241742560-241748903	0	+	241742560	241748903	789624	4	14,194,169,77,	0,1061,2148,6266,
#Partially deleted in new
chr2	241748829	241756014	chr2:241748829-241756014	0	+	241748829	241756014	789624	4	113,144,143,166,	0,1321,2416,7019,
#Partially deleted in new
chr2	241748835	241751389	chr2:241748835-241751389	0	+	241748835	241748835	8553170	4	107,101,144,144,	0,463,1315,2410,
#Partially deleted in new
chr2	241748869	241755210	chr2:241748869-241755210	0	+	241748869	241748869	8553170	4	139,106,144,166,	0,424,1281,6175,
#Partially deleted in new
chr2	241748989	241768811	chr2:241748989-241768811	0	+	241748989	241748989	8553170	4	19,144,970,1099,	0,1161,6055,18723,
#Partially deleted in new
chr2	241749816	241767948	chr2:241749816-241767948	0	+	241749816	241749816	8553170	4	478,143,166,239,	0,1429,6032,17893,
#Partially deleted in new
chr2	241750098	241768816	chr2:241750098-241768816	0	+	241750098	241750098	8553170	4	196,143,166,1107,	0,1147,5750,17611,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	241754520	241768811	chr2:241754520-241768811	0	+	241754520	241754520	8553170	3	226,970,1102,	0,524,13189,
#Partially deleted in new
chr2	241755073	241767962	chr2:241755073-241767962	0	+	241755073	241767962	789624	3	536,166,253,	0,775,12636,
#Partially deleted in new
chr2	241776824	241804208	chr2:241776824-241804208	3	+	241776955	241804166	789624	4	160,90,256,864,	0,22240,24956,26520,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	241800915	241801907	chr2:241800915-241801907	3	-	241800915	241800915	8553170	2	473,266,	0,726,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	241808311	241810637	chr2:241808311-241810637	3	-	241808311	241808311	8553170	2	1057,171,	0,2155,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	241808824	241817413	chr2:241808824-241817413	1	+	241814484	241817048	789624	4	450,204,256,1363,	0,5657,6067,7226,
#Deleted in new
chr2	241809064	241816493	chr2:241809064-241816493	0	+	241814484	241816493	789624	3	210,207,443,	0,5414,6986,
#Deleted in new
chr2	241809109	241810623	chr2:241809109-241810623	1	-	241809109	241809109	8553170	3	259,48,24,	0,1357,1490,
#Deleted in new
chr2	241809186	241817406	chr2:241809186-241817406	1	+	241814484	241817048	789624	4	88,207,256,1356,	0,5292,5705,6864,
#Deleted in new
chr2	241809192	241817408	chr2:241809192-241817408	0	+	241814484	241815560	789624	5	82,204,256,714,1025,	0,5289,5699,6348,7191,
#Deleted in new
chr2	241809192	241814932	chr2:241809192-241814932	0	+	241809192	241809192	8553170	2	82,454,	0,5286,
#Deleted in new
chr2	241809192	241817409	chr2:241809192-241817409	0	+	241809192	241809192	8553170	2	82,2931,	0,5286,
#Deleted in new
chr2	241809234	241816159	chr2:241809234-241816159	0	+	241814484	241816159	789624	5	40,144,204,256,109,	0,547,5247,5657,6816,
#Deleted in new
chr2	241809697	241812016	chr2:241809697-241812016	1	-	241809697	241809697	8553170	3	109,771,313,	0,749,2006,
#Deleted in new
chr2	241810931	241817412	chr2:241810931-241817412	3	+	241811428	241817048	789624	4	530,204,256,1362,	0,3550,3960,5119,
#Deleted in new
chr2	241810934	241817408	chr2:241810934-241817408	1	+	241814484	241817048	789624	5	527,181,204,256,1358,	0,2398,3547,3957,5116,
#Deleted in new
chr2	241810999	241817413	chr2:241810999-241817413	1	+	241811428	241817048	789624	4	462,207,256,1363,	0,3479,3892,5051,
#Deleted in new
chr2	241811389	241814523	chr2:241811389-241814523	0	+	241813555	241814523	789624	3	72,337,42,	0,1943,3092,
#Deleted in new
chr2	241811395	241816456	chr2:241811395-241816456	0	+	241811428	241816456	789624	3	66,204,406,	0,3086,4655,
#Deleted in new
chr2	241811395	241814921	chr2:241811395-241814921	0	+	241814484	241814921	789624	4	66,181,207,30,	0,1937,3083,3496,
#Deleted in new
chr2	241811396	241816374	chr2:241811396-241816374	0	+	241814484	241816374	789624	4	58,207,256,324,	0,3082,3495,4654,
#Deleted in new
chr2	241811408	241813770	chr2:241811408-241813770	0	+	241811408	241811408	8553170	2	53,438,	0,1924,
#Deleted in new
chr2	241811424	241814982	chr2:241811424-241814982	0	+	241811424	241811424	8553170	2	37,504,	0,3054,
#Deleted in new
chr2	241814016	241815000	chr2:241814016-241815000	0	+	241814088	241815000	789624	3	192,204,109,	0,465,875,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	241844379	241845036	chr2:241844379-241845036	3	+	241844379	241844379	8553170	2	99,472,	0,185,
#Partially deleted in new
chr2	241849880	241858908	chr2:241849880-241858908	3	-	241851057	241858838	0	5	1417,35,156,360,146,	0,2068,2317,2740,8882,
#Partially deleted in new
chr2	241850696	241858865	chr2:241850696-241858865	0	-	241852352	241858838	789624	5	601,35,156,124,103,	0,1252,1501,2160,8066,
#Deleted in new
chr2	241851232	241852886	chr2:241851232-241852886	0	-	241851232	241852886	789624	3	65,35,266,	0,716,1388,
#Deleted in new
chr2	241869599	241873819	chr2:241869599-241873819	0	+	241869756	241871000	789624	3	315,181,2106,	0,1391,2114,
#Deleted in new
chr2	241869728	241873823	chr2:241869728-241873823	3	+	241869756	241873274	789624	2	186,2110,	0,1985,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr2	241881365	242078722	chr2:241881365-242078722	3	+	241881365	241881365	789624	4	113,76,121,263,	0,1194,84561,197094,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr2	241881366	241966328	chr2:241881366-241966328	0	+	241881366	241881366	8553170	3	108,76,402,	0,1193,84560,
#Partially deleted in new
chr2	241893984	241900448	chr2:241893984-241900448	3	-	241894212	241900369	789624	3	355,149,91,	0,3201,6373,
#Partially deleted in new
chr2	241893988	241899138	chr2:241893988-241899138	1	-	241894212	241897331	789624	3	351,149,24,	0,3197,5126,
#Partially deleted in new
chr2	241894036	241902551	chr2:241894036-241902551	1	-	241894212	241897331	789624	3	303,149,55,	0,3149,8460,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	241933835	241966120	chr2:241933835-241966120	0	+	241933835	241933835	8553170	2	375,194,	0,32091,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr2	241970682	241977276	chr2:241970682-241977276	3	+	241970682	241970682	789624	6	599,119,91,57,105,1199,	0,692,1002,1430,1769,5395,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	241971277	241971924	chr2:241971277-241971924	0	+	241971277	241971277	8553170	2	185,245,	0,402,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr2	241972037	241974529	chr2:241972037-241974529	0	+	241972037	241972037	8553170	2	519,80,	0,2412,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr2	242001208	242006013	chr2:242001208-242006013	3	+	242001208	242001208	789624	1	4805,	0,
#Deleted in new
chr2	242025182	242026176	chr2:242025182-242026176	3	-	242025182	242025182	8553170	2	403,162,	0,832,
#Partially deleted in new
chr2	242047694	242084138	chr2:242047694-242084138	3	-	242047694	242047694	8553170	4	69,226,223,43,	0,363,12602,36401,
#Deleted in new
chr2	242087350	242088457	chr2:242087350-242088457	3	-	242087350	242087350	8553170	1	1107,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr2	242088632	242140638	chr2:242088632-242140638	5	+	242088632	242088632	16724991	8	169,141,103,50,93,169,105,405,	0,6254,26006,27550,30332,33654,50151,51601,
#Partially deleted in new
chr2	242088678	242116372	chr2:242088678-242116372	4	+	242088678	242088678	16724991	4	123,141,103,190,	0,6208,25960,27504,
#Partially deleted in new
chr2	242088683	242159382	chr2:242088683-242159382	4	+	242088683	242088683	16724991	5	118,141,93,169,34,	0,6203,30281,33603,70665,
#Partially deleted in new
chr2	242088692	242122405	chr2:242088692-242122405	4	+	242088692	242088692	16724991	5	109,141,103,93,119,	0,6194,25946,30272,33594,
#Partially deleted in new
chr2	242088695	242160153	chr2:242088695-242160153	7	+	242088695	242088695	16724991	7	106,141,103,158,105,150,194,	0,6191,25943,41959,50088,70653,71264,
#Partially deleted in new
chr2	242094893	242130807	chr2:242094893-242130807	5	+	242094893	242094893	16724991	5	134,103,50,93,32,	0,19745,21289,24071,35882,
#Deleted in new
chr2	242119855	242120053	chr2:242119855-242120053	7	-	242119855	242119855	16724991	1	198,	0,
#Deleted in new
chr2	242122286	242122469	chr2:242122286-242122469	7	+	242122286	242122286	16724991	1	183,	0,
#Partially deleted in new
chr2	242122292	242138888	chr2:242122292-242138888	4	+	242122292	242122292	16724991	3	163,212,105,	0,8362,16491,
#Deleted in new
chr2	242175180	242175634	chr2:242175180-242175634	7	+	242175180	242175180	16724991	1	454,	0,
#Partially deleted in new
chr20	87249	97094	chr20:87249-97094	0	+	87249	87249	8553170	2	110,1090,	0,8755,
#Partially deleted in new
chr20	87709	96533	chr20:87709-96533	3	+	87709	96417	789624	2	58,529,	0,8295,
#Deleted in new
chr20	142368	145751	chr20:142368-145751	3	+	142628	145692	789624	2	318,337,	0,3046,
#Deleted in new
chr20	142633	145749	chr20:142633-145749	0	+	142633	142633	8553170	3	53,74,171,	0,2781,2945,
#Partially deleted in new
chr20	157469	159163	chr20:157469-159163	3	+	157544	159024	789624	2	124,390,	0,1304,
#Deleted in new
chr20	187852	189681	chr20:187852-189681	3	-	187885	189623	789624	2	266,107,	0,1722,
#Partially deleted in new
chr20	227257	229886	chr20:227257-229886	3	+	227288	229771	789624	2	89,609,	0,2020,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	257735	261096	chr20:257735-261096	3	+	257778	259306	789624	2	101,2020,	0,1341,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	267185	268857	chr20:267185-268857	3	+	267185	267185	8553170	1	1672,	0,
#Partially deleted in new
chr20	270862	290749	chr20:270862-290749	3	-	271206	290610	789624	11	405,119,87,102,158,100,159,119,118,49,159,	0,5105,5930,6181,6363,7467,8309,13100,18696,19396,19728,
#Partially deleted in new
chr20	270862	290429	chr20:270862-290429	1	-	271206	290340	789624	9	405,119,87,102,158,100,159,119,171,	0,5105,5930,6181,6363,7467,8309,13100,19396,
#Partially deleted in new
chr20	270862	290778	chr20:270862-290778	1	-	271206	290603	789624	11	405,119,87,102,158,100,159,119,118,49,192,	0,5105,5930,6181,6363,7467,8309,13100,18696,19396,19724,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	296967	300321	chr20:296967-300321	3	+	297586	298798	789624	1	3354,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	320312	325234	chr20:320312-325234	0	-	320312	320312	789624	3	469,188,93,	0,2065,4829,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	320332	348224	chr20:320332-348224	3	-	320332	320332	8553170	3	449,188,125,	0,2045,27767,
#Deleted in new
chr20	325594	330224	chr20:325594-330224	3	+	325924	326872	789624	1	4630,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	346781	353493	chr20:346781-353493	0	+	349643	353493	789624	5	116,115,195,97,55,	0,2467,2856,6428,6657,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	346882	353680	chr20:346882-353680	0	+	346882	346882	8553170	3	260,115,471,	0,2366,6327,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	347023	354868	chr20:347023-354868	3	+	349643	353635	789624	4	119,115,195,1659,	0,2225,2614,6186,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	347104	353829	chr20:347104-353829	1	+	349643	353635	789624	5	38,79,115,195,620,	0,329,2144,2533,6105,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	347104	353502	chr20:347104-353502	0	+	349643	353502	789624	6	38,73,115,195,97,64,	0,329,2144,2533,6105,6334,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	347119	359405	chr20:347119-359405	1	+	349643	355334	789624	5	23,115,195,24,147,	0,2129,2518,8206,12139,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	348299	353503	chr20:348299-353503	0	+	349643	353503	789624	4	93,115,195,294,	0,949,1338,4910,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	349248	359660	chr20:349248-359660	1	+	349643	359318	789624	3	115,195,402,	0,389,10010,
#Partially deleted in new
chr20	349632	354861	chr20:349632-354861	1	+	349643	353635	789624	2	200,1652,	0,3577,
#Partially deleted in new
chr20	349725	354848	chr20:349725-354848	0	+	349725	354116	789624	3	107,97,737,	0,3484,4386,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	362834	391386	chr20:362834-391386	0	+	388010	391386	789624	5	79,126,281,291,100,	0,12610,22618,25176,28452,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	380616	397559	chr20:380616-397559	3	+	388010	396690	789624	4	553,291,293,1362,	0,7394,10670,15581,
#Partially deleted in new
chr20	381245	396428	chr20:381245-396428	0	+	388010	396428	789624	4	255,291,293,231,	0,6765,10041,14952,
#Partially deleted in new
chr20	381296	396748	chr20:381296-396748	1	+	382545	396690	789624	5	204,194,291,293,551,	0,1136,6714,9990,14901,
#Partially deleted in new
chr20	407497	417822	chr20:407497-417822	0	+	408757	417822	789624	5	174,89,145,94,91,	0,1193,2383,10028,10234,
#Deleted in new
chr20	407539	408751	chr20:407539-408751	0	+	407539	407539	8553170	2	132,240,	0,972,
#Partially deleted in new
chr20	408049	430966	chr20:408049-430966	0	+	408757	427319	789624	12	730,145,94,199,122,174,136,112,180,99,144,617,	0,1831,9476,9682,11297,11508,12821,14077,19263,20441,20901,22300,
#Partially deleted in new
chr20	408052	430966	chr20:408052-430966	3	+	408757	430430	0	12	727,145,94,199,122,174,161,112,180,99,144,617,	0,1828,9473,9679,11294,11505,12818,14074,19260,20438,20898,22297,
#Partially deleted in new
chr20	408052	430966	chr20:408052-430966	0	+	408757	422189	789624	11	727,145,94,199,122,174,112,180,99,144,617,	0,1828,9473,9679,11294,11505,14074,19260,20438,20898,22297,
#Partially deleted in new
chr20	408064	430964	chr20:408064-430964	1	+	417819	430430	789624	11	715,145,94,199,122,174,112,180,99,144,615,	0,1816,9461,9667,11282,11493,14062,19248,20426,20886,22285,
#Deleted in new
chr20	408077	410764	chr20:408077-410764	1	+	408757	410562	789624	3	702,145,353,	0,1803,2334,
#Partially deleted in new
chr20	408146	417823	chr20:408146-417823	0	+	408757	417823	789624	4	633,142,94,92,	0,1737,9379,9585,
#Partially deleted in new
chr20	408170	430966	chr20:408170-430966	1	+	408738	430430	0	11	609,94,199,122,174,161,112,180,99,144,617,	0,9355,9561,11176,11387,12700,13956,19142,20320,20780,22179,
#Deleted in new
chr20	408304	410764	chr20:408304-410764	0	+	408304	408304	8553170	3	475,196,353,	0,1525,2107,
#Partially deleted in new
chr20	408312	430966	chr20:408312-430966	1	+	417819	430430	789624	10	467,94,199,122,174,112,180,99,144,617,	0,9213,9419,11034,11245,13814,19000,20178,20638,22037,
#Deleted in new
chr20	408342	410764	chr20:408342-410764	1	+	408738	410562	789624	2	437,353,	0,2069,
#Partially deleted in new
chr20	409883	419642	chr20:409883-419642	0	+	409883	419642	789624	6	142,123,94,199,122,85,	0,7336,7642,7848,9463,9674,
#Partially deleted in new
chr20	421941	427488	chr20:421941-427488	0	+	421941	421941	8553170	2	297,176,	0,5371,
#Partially deleted in new
chr20	422153	430966	chr20:422153-430966	0	+	422153	422153	8553170	4	85,180,604,617,	0,5159,6337,8196,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	435479	462553	chr20:435479-462553	3	-	438585	462405	0	8	3362,188,142,102,187,81,186,218,	0,3628,4768,6108,6377,9570,12409,26856,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	435479	441892	chr20:435479-441892	0	-	435479	435479	8553170	3	3362,188,1645,	0,3628,4768,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	436282	462543	chr20:436282-462543	0	-	436282	436282	8553170	7	2559,188,142,456,81,186,208,	0,2825,3965,5305,8767,11606,26053,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	450662	450762	chr20:450662-450762	3	+	450662	450662	8553170	1	100,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	472497	543835	chr20:472497-543835	3	-	483960	508551	0	13	11579,87,149,101,102,111,84,60,51,102,112,210,164,	0,13878,14929,16180,17282,19756,23221,25223,26757,27335,32620,35953,71174,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	472507	543732	chr20:472507-543732	1	-	483960	508551	0	14	1443,149,87,149,101,102,111,84,60,51,102,112,210,61,	0,11420,13868,14919,16170,17272,19746,23211,25213,26747,27325,32610,35943,71164,
#Partially deleted in new
chr20	473260	543738	chr20:473260-543738	1	-	483960	508551	0	15	690,149,87,149,101,102,111,84,60,51,102,112,210,117,67,	0,10667,13115,14166,15417,16519,18993,22458,24460,25994,26572,31857,35190,54672,70411,
#Partially deleted in new
chr20	473336	488736	chr20:473336-488736	0	-	473888	488736	789624	4	614,87,149,59,	0,13039,14090,15341,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	478464	543696	chr20:478464-543696	1	-	478662	508551	789624	13	296,87,149,101,102,111,84,60,51,102,112,210,25,	0,7911,8962,10213,11315,13789,17254,19256,20790,21368,26653,29986,65207,
#Partially deleted in new
chr20	481109	543792	chr20:481109-543792	1	-	483960	497738	0	12	2967,87,149,101,102,111,84,60,51,102,112,121,	0,5266,6317,7568,8670,11144,14609,16611,18145,18723,24008,62562,
#Partially deleted in new
chr20	481124	543823	chr20:481124-543823	1	-	483960	508551	0	14	2952,87,149,101,102,111,84,60,51,102,112,210,117,152,	0,5251,6302,7553,8655,11129,14594,16596,18130,18708,23993,27326,46808,62547,
#Partially deleted in new
chr20	481146	543712	chr20:481146-543712	0	-	481146	481146	8553170	12	2930,87,149,101,102,111,84,60,680,112,210,41,	0,5229,6280,7531,8633,11107,14572,16574,18108,23971,27304,62525,
#Partially deleted in new
chr20	481146	543729	chr20:481146-543729	0	-	481146	481146	8553170	12	2930,1200,101,102,111,84,60,51,102,112,210,58,	0,5229,7531,8633,11107,14572,16574,18108,18686,23971,27304,62525,
#Partially deleted in new
chr20	481149	543759	chr20:481149-543759	0	-	499591	508551	789624	14	2927,87,149,101,102,111,84,60,51,106,102,112,210,88,	0,5226,6277,7528,8630,11104,14569,16571,18105,18375,18683,23968,27301,62522,
#Partially deleted in new
chr20	481154	543790	chr20:481154-543790	0	-	500061	508551	789624	14	2922,87,149,101,102,111,84,60,51,102,85,112,210,119,	0,5221,6272,7523,8625,11099,14564,16566,18100,18678,18876,23963,27296,62517,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr20	481191	543712	chr20:481191-543712	1	-	483960	508551	0	15	2885,87,149,101,102,111,84,60,51,102,112,210,247,117,41,	0,5184,6235,7486,8588,11062,14527,16529,18063,18641,23926,27259,45504,46741,62480,
#Partially deleted in new
chr20	481622	543727	chr20:481622-543727	1	-	483960	508551	789624	11	2454,87,149,101,102,111,84,102,112,210,56,	0,4753,5804,7055,8157,10631,14096,18210,23495,26828,62049,
#Partially deleted in new
chr20	482710	543732	chr20:482710-543732	1	-	483960	508551	789624	12	1366,87,149,101,102,111,84,60,102,112,210,61,	0,3665,4716,5967,7069,9543,13008,15010,17122,22407,25740,60961,
#Partially deleted in new
chr20	482714	543712	chr20:482714-543712	1	-	484019	508551	789624	13	1376,87,149,101,102,111,84,60,51,102,112,210,41,	0,3661,4712,5963,7065,9539,13004,15006,16540,17118,22403,25736,60957,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	482721	543712	chr20:482721-543712	1	-	483960	508551	0	14	1355,87,149,101,102,111,84,60,51,102,112,210,247,41,	0,3654,4705,5956,7058,9532,12997,14999,16533,17111,22396,25729,43974,60950,
#Partially deleted in new
chr20	482723	543712	chr20:482723-543712	1	-	483960	508551	789624	12	1353,87,149,101,102,111,60,51,102,112,210,41,	0,3652,4703,5954,7056,9530,14997,16531,17109,22394,25727,60948,
#Partially deleted in new
chr20	482723	543732	chr20:482723-543732	1	-	483960	497738	0	15	1353,87,149,101,102,111,84,60,51,49,102,85,112,117,61,	0,3652,4703,5954,7056,9530,12995,14997,16531,16801,17109,17307,22394,45209,60948,
#Partially deleted in new
chr20	482731	489247	chr20:482731-489247	0	-	482731	482731	8553170	4	1345,87,149,570,	0,3644,4695,5946,
#Partially deleted in new
chr20	482735	498196	chr20:482735-498196	0	-	482735	482735	8553170	8	1341,87,149,101,102,111,84,476,	0,3640,4691,5942,7044,9518,12983,14985,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	482741	496728	chr20:482741-496728	0	-	482741	482741	8553170	7	1335,87,149,101,102,111,1010,	0,3634,4685,5936,7038,9512,12977,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	482747	543735	chr20:482747-543735	1	-	483960	508551	789624	13	1329,87,149,101,102,111,84,60,102,112,210,247,64,	0,3628,4679,5930,7032,9506,12971,14973,17085,22370,25703,43948,60924,
#Partially deleted in new
chr20	482776	500609	chr20:482776-500609	0	-	482776	482776	8553170	10	1300,87,149,101,102,111,84,60,680,579,	0,3599,4650,5901,7003,9477,12942,14944,16478,17254,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	482781	543727	chr20:482781-543727	0	-	482781	482781	8553170	12	1295,87,1352,102,111,84,60,51,102,112,210,56,	0,3594,4645,6998,9472,12937,14939,16473,17051,22336,25669,60890,
#Partially deleted in new
chr20	482856	492717	chr20:482856-492717	0	-	482856	482856	8553170	6	1220,87,149,101,102,464,	0,3519,4570,5821,6923,9397,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	482864	500774	chr20:482864-500774	0	-	482864	482864	8553170	10	1212,87,149,101,102,111,84,60,51,942,	0,3511,4562,5813,6915,9389,12854,14856,16390,16968,
#Partially deleted in new
chr20	482886	543735	chr20:482886-543735	1	-	483960	497738	0	13	1190,87,149,101,102,111,84,60,51,106,102,112,64,	0,3489,4540,5791,6893,9367,12832,14834,16368,16638,16946,22231,60785,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr20	482921	543732	chr20:482921-543732	0	-	503209	508551	789624	16	1155,87,149,101,102,111,84,60,51,102,141,217,112,210,117,61,	0,3454,4505,5756,6858,9332,12797,14799,16333,16911,17109,20143,22196,25529,45011,60750,
#Partially deleted in new
chr20	483389	543732	chr20:483389-543732	1	-	483960	508551	789624	12	687,87,149,101,102,84,60,51,102,112,210,61,	0,2986,4037,5288,6390,12329,14331,15865,16443,21728,25061,60282,
#Partially deleted in new
chr20	483764	543730	chr20:483764-543730	1	-	483960	508551	0	13	312,87,149,101,102,111,84,60,51,102,112,155,59,	0,2611,3662,4913,6015,8489,11954,13956,15490,16068,21353,24686,59907,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	483790	543787	chr20:483790-543787	1	-	483960	508551	0	14	286,87,149,101,102,111,84,60,51,102,112,210,210,116,	0,2585,3636,4887,5989,8463,11928,13930,15464,16042,21327,24660,57099,59881,
#Partially deleted in new
chr20	489502	543718	chr20:489502-543718	1	-	489731	508551	789624	9	379,111,84,60,51,102,112,210,47,	0,2751,6216,8218,9752,10330,15615,18948,54169,
#Partially deleted in new
chr20	492253	543750	chr20:492253-543750	0	-	492253	508551	789624	8	111,84,60,51,102,112,210,119,	0,3465,5467,7001,7579,12864,16197,51378,
#Partially deleted in new
chr20	492338	543770	chr20:492338-543770	0	-	492338	497738	789624	8	26,84,60,51,102,112,117,99,	0,3380,5382,6916,7494,12779,35594,51333,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	494130	543704	chr20:494130-543704	0	-	499591	508551	789624	8	1672,60,51,106,102,112,210,33,	0,3590,5124,5394,5702,10987,14320,49541,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	494224	498165	chr20:494224-498165	0	-	494224	494224	8553170	2	1578,445,	0,3496,
#Partially deleted in new
chr20	495731	543767	chr20:495731-543767	0	-	495731	508551	789624	6	71,60,51,112,210,96,	0,1989,3523,9386,12719,47940,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	495796	543704	chr20:495796-543704	0	-	495796	508551	789624	8	6,60,51,102,112,210,272,33,	0,1924,3458,4036,9321,12654,45031,47875,
#Partially deleted in new
chr20	497746	543727	chr20:497746-543727	0	-	497746	508551	789624	6	34,51,102,112,171,56,	0,1508,2086,7371,10704,45925,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	498357	543790	chr20:498357-543790	0	-	498357	498357	8553170	4	1577,112,210,119,	0,6760,10093,45314,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	498454	505235	chr20:498454-505235	0	-	498454	498454	8553170	2	1480,118,	0,6663,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	499869	543729	chr20:499869-543729	0	-	499869	508551	789624	5	65,112,210,171,58,	0,5248,8581,10298,43802,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	499923	540009	chr20:499923-540009	0	-	499923	508551	789624	4	11,112,210,811,	0,5194,8527,39275,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	500760	508498	chr20:500760-508498	0	-	500760	500760	8553170	3	2521,112,48,	0,4357,7690,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	503306	543781	chr20:503306-543781	1	-	503449	508551	789624	4	389,112,210,110,	0,1811,5144,40365,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	504165	543816	chr20:504165-543816	1	-	505069	508551	789624	3	1064,210,145,	0,4285,39506,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	505910	543728	chr20:505910-543728	0	-	505910	505910	8553170	2	2750,57,	0,37761,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	508450	543239	chr20:508450-543239	0	-	508450	508551	789624	3	210,150,186,	0,31224,34603,
#Partially deleted in new
chr20	603796	610398	chr20:603796-610398	3	-	604590	610237	789624	2	869,686,	0,5916,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	646614	653370	chr20:646614-653370	3	-	648713	653185	0	2	2303,395,	0,6361,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	646625	675800	chr20:646625-675800	3	-	648855	675601	789624	3	2292,90,332,	0,7605,28843,
#Partially deleted in new
chr20	661595	676179	chr20:661595-676179	3	-	663670	675601	789624	2	2866,711,	0,13873,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	760079	776015	chr20:760079-776015	3	-	761025	765774	789624	6	1159,124,506,618,186,61,	0,1621,3418,5128,8217,15875,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	760079	768633	chr20:760079-768633	1	-	761649	765774	789624	4	1745,506,618,337,	0,3418,5128,8217,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	760079	768580	chr20:760079-768580	1	-	761025	765774	789624	5	1159,124,506,618,284,	0,1621,3418,5128,8217,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	760079	768500	chr20:760079-768500	1	-	761025	765774	789624	5	1159,124,506,618,204,	0,1621,3418,5128,8217,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	760118	768484	chr20:760118-768484	1	-	761025	765774	789624	5	1120,124,506,1127,188,	0,1582,3379,5089,8178,
#Partially deleted in new
chr20	761023	765825	chr20:761023-765825	0	-	761023	761023	8553170	3	215,124,618,	0,677,4184,
#Partially deleted in new
chr20	833714	846279	chr20:833714-846279	3	+	844804	845692	789624	2	237,1572,	0,10993,
#Partially deleted in new
chr20	833776	846279	chr20:833776-846279	1	+	844804	845692	789624	3	175,109,1572,	0,5678,10931,
#Partially deleted in new
chr20	833783	846279	chr20:833783-846279	1	+	844804	845692	789624	2	168,1569,	0,10927,
#Partially deleted in new
chr20	836067	846279	chr20:836067-846279	1	+	844804	845692	789624	2	47,1572,	0,8640,
#Deleted in new
chr20	839446	839977	chr20:839446-839977	7	-	839446	839446	16724991	1	531,	0,
#Partially deleted in new
chr20	841274	846279	chr20:841274-846279	1	+	844804	845692	789624	2	42,1572,	0,3433,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	845123	857463	chr20:845123-857463	0	+	845123	845692	789624	2	613,715,	0,11625,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	869898	916317	chr20:869898-916317	3	-	872959	916214	789624	9	3222,131,167,102,116,248,122,156,412,	0,4385,8262,9848,11272,15179,18419,20314,46007,
#Partially deleted in new
chr20	958451	1002261	chr20:958451-1002261	3	-	960356	1002164	789624	5	2015,186,141,189,176,	0,5483,8722,9498,43634,
#Partially deleted in new
chr20	960253	1002264	chr20:960253-1002264	1	-	960356	1002164	789624	4	213,141,189,179,	0,6920,7696,41832,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	1113262	1167782	chr20:1113262-1167782	3	+	1118773	1165080	0	8	147,150,153,83,186,54,159,2754,	0,5490,12235,14163,21858,49867,51055,51766,
#Partially deleted in new
chr20	1113277	1135306	chr20:1113277-1135306	0	+	1118773	1135306	789624	5	132,150,153,83,186,	0,5475,12220,14148,21843,
#Partially deleted in new
chr20	1113305	1164397	chr20:1113305-1164397	0	+	1113305	1113305	8553170	6	104,153,83,186,54,80,	0,12192,14120,21815,49824,51012,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	1117846	1118450	chr20:1117846-1118450	3	-	1117846	1117846	789624	2	142,67,	0,537,
#Partially deleted in new
chr20	1118597	1167328	chr20:1118597-1167328	1	+	1118773	1166254	789624	7	305,153,83,186,54,159,1102,	0,6900,8828,16523,44532,45720,47629,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	1118597	1168378	chr20:1118597-1168378	1	+	1118773	1165080	0	7	305,153,83,186,54,159,3350,	0,6900,8828,16523,44532,45720,46431,
#Partially deleted in new
chr20	1118609	1135306	chr20:1118609-1135306	0	+	1118609	1118609	8553170	3	293,153,186,	0,6888,16511,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	1134839	1168378	chr20:1134839-1168378	0	+	1134839	1134839	8553170	4	467,54,159,3350,	0,28290,29478,30189,
#Partially deleted in new
chr20	1135177	1165059	chr20:1135177-1165059	0	+	1135177	1165059	789624	3	129,159,31,	0,29140,29851,
#Partially deleted in new
chr20	1135277	1189415	chr20:1135277-1189415	0	+	1135277	1186481	789624	5	29,54,159,156,244,	0,27852,29040,51062,53894,
#Deleted in new
chr20	1160583	1161697	chr20:1160583-1161697	7	+	1160583	1160583	16724991	1	1114,	0,
#Partially deleted in new
chr20	1166279	1179952	chr20:1166279-1179952	0	+	1166279	1166279	8553170	3	148,86,92,	0,9593,13581,
#Partially deleted in new
chr20	1180560	1184473	chr20:1180560-1184473	3	-	1180847	1183801	789624	2	1027,703,	0,3210,
#Partially deleted in new
chr20	1181156	1184675	chr20:1181156-1184675	0	-	1181156	1183801	789624	3	431,178,374,	0,2614,3145,
#Partially deleted in new
chr20	1181283	1185415	chr20:1181283-1185415	0	-	1181283	1181283	8553170	2	304,278,	0,3854,
#Partially deleted in new
chr20	1186091	1207036	chr20:1186091-1207036	3	+	1186091	1186091	8553170	2	404,168,	0,20777,
#Partially deleted in new
chr20	1203453	1208274	chr20:1203453-1208274	3	+	1203516	1207102	789624	2	198,1406,	0,3415,
#Partially deleted in new
chr20	1226055	1296421	chr20:1226055-1296421	1	+	1228453	1296397	789624	14	85,176,130,94,107,171,96,114,227,100,125,78,107,97,	0,2366,3824,5470,8029,11988,13256,14265,16563,17041,17990,22570,40598,70269,
#Partially deleted in new
chr20	1226119	1254501	chr20:1226119-1254501	3	+	1228453	1254457	789624	14	61,176,130,94,107,171,96,114,227,100,125,96,78,233,	0,2302,3760,5406,7965,11924,13192,14201,16499,16977,17926,20090,22506,28149,
#Partially deleted in new
chr20	1226134	1229931	chr20:1226134-1229931	0	+	1228453	1229931	789624	3	264,176,52,	0,2287,3745,
#Partially deleted in new
chr20	1230476	1234117	chr20:1230476-1234117	0	+	1230476	1230476	8553170	3	436,94,33,	0,1049,3608,
#Partially deleted in new
chr20	1266279	1307051	chr20:1266279-1307051	1	+	1296371	1306054	8553170	6	118,107,97,207,150,2174,	0,374,30045,30766,34282,38598,
#Partially deleted in new
chr20	1266315	1309328	chr20:1266315-1309328	3	+	1296371	1306054	789624	6	82,107,97,108,150,4451,	0,338,30009,30829,34246,38562,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	1266354	1309328	chr20:1266354-1309328	1	+	1296239	1306054	789624	7	43,107,28,646,108,150,4451,	0,299,28596,29421,30790,34207,38523,
#Partially deleted in new
chr20	1295773	1309325	chr20:1295773-1309325	1	+	1296239	1306054	789624	4	648,108,150,4448,	0,1371,4788,9104,
#Partially deleted in new
chr20	1309908	1325707	chr20:1309908-1325707	1	-	1310440	1320416	789624	9	587,92,172,176,159,101,70,73,120,	0,891,2428,2678,3431,8409,9681,10454,15679,
#Partially deleted in new
chr20	1309974	1325869	chr20:1309974-1325869	1	-	1310440	1320416	789624	9	521,92,172,176,159,101,70,73,40,	0,825,2362,2612,3365,8343,9615,10388,15855,
#Partially deleted in new
chr20	1309974	1329239	chr20:1309974-1329239	1	-	1310440	1320416	789624	9	521,92,172,176,159,101,70,73,155,	0,825,2362,2612,3365,8343,9615,10388,19110,
#Partially deleted in new
chr20	1309974	1313639	chr20:1309974-1313639	3	-	1310440	1313468	789624	5	521,92,172,176,300,	0,825,2362,2612,3365,
#Deleted in new
chr20	1310297	1311081	chr20:1310297-1311081	0	-	1310297	1310297	8553170	2	198,282,	0,502,
#Partially deleted in new
chr20	1312701	1329139	chr20:1312701-1329139	0	-	1312701	1312701	8553170	5	797,101,70,73,55,	0,5616,6888,7661,16383,
#Partially deleted in new
chr20	1317570	1393086	chr20:1317570-1393086	0	-	1317570	1317570	8553170	5	848,70,73,48,125,	0,2019,2792,75263,75391,
#Partially deleted in new
chr20	1318372	1393096	chr20:1318372-1393096	3	-	1319585	1392998	789624	6	46,152,73,119,48,135,	0,1135,1990,73230,74461,74589,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	1320709	1324367	chr20:1320709-1324367	3	+	1320709	1320709	8553170	1	3658,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	1325404	1345898	chr20:1325404-1345898	0	+	1325404	1325404	8553170	2	125,730,	0,19764,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	1325409	1378734	chr20:1325409-1378734	3	+	1325409	1325409	789624	3	120,101,1937,	0,47668,51388,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	1325418	1361631	chr20:1325418-1361631	1	+	1325418	1325418	8553170	3	111,122,575,	0,34280,35638,
#Partially deleted in new
chr20	1325420	1378183	chr20:1325420-1378183	1	+	1325420	1325420	789624	4	109,101,215,1386,	0,47657,49063,51377,
#Partially deleted in new
chr20	1325420	1376895	chr20:1325420-1376895	0	+	1325420	1325420	8553170	3	362,101,98,	0,47657,51377,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	1361621	1362585	chr20:1361621-1362585	3	+	1361621	1361621	8553170	2	291,189,	0,775,
#Partially deleted in new
chr20	1368977	1393162	chr20:1368977-1393162	3	-	1372111	1392998	0	5	1095,165,113,48,201,	0,3098,6513,23856,23984,
#Partially deleted in new
chr20	1368977	1375603	chr20:1368977-1375603	0	-	1368977	1368977	8553170	4	62,301,165,113,	0,794,3098,6513,
#Partially deleted in new
chr20	1368978	1393172	chr20:1368978-1393172	1	-	1372111	1392998	789624	4	1094,165,113,211,	0,3097,6512,23983,
#Partially deleted in new
chr20	1368978	1393172	chr20:1368978-1393172	1	-	1370028	1392998	789624	4	1094,165,48,211,	0,3097,23855,23983,
#Partially deleted in new
chr20	1369579	1393038	chr20:1369579-1393038	1	-	1372111	1392903	789624	4	493,165,113,205,	0,2496,5911,23254,
#Partially deleted in new
chr20	1369583	1372154	chr20:1369583-1372154	0	-	1369583	1369583	8553170	3	489,126,79,	0,1438,2492,
#Partially deleted in new
chr20	1369986	1378174	chr20:1369986-1378174	0	-	1369986	1369986	8553170	5	86,165,113,82,105,	0,2089,5504,7443,8083,
#Partially deleted in new
chr20	1371721	1393028	chr20:1371721-1393028	1	-	1372111	1392998	0	4	519,113,48,67,	0,3769,21112,21240,
#Partially deleted in new
chr20	1371777	1392962	chr20:1371777-1392962	1	-	1372111	1392903	789624	3	463,113,129,	0,3713,21056,
#Partially deleted in new
chr20	1372111	1392998	chr20:1372111-1392998	0	-	1377482	1392998	789624	5	129,113,82,48,37,	0,3379,5318,20722,20850,
#Partially deleted in new
chr20	1375292	1393164	chr20:1375292-1393164	1	-	1375298	1392998	789624	3	311,48,203,	0,17541,17669,
#Deleted in new
chr20	1392899	1392961	chr20:1392899-1392961	3	-	1392899	1392899	5263520	1	62,	0,
#Partially deleted in new
chr20	1442161	1467692	chr20:1442161-1467692	3	-	1443748	1466824	0	9	1750,165,138,110,93,166,75,98,973,	0,3504,10331,10869,12051,12805,16038,22167,24558,
#Partially deleted in new
chr20	1442161	1466828	chr20:1442161-1466828	1	-	1443748	1466824	0	8	1750,165,138,110,166,75,98,109,	0,3504,10331,10869,12805,16038,22167,24558,
#Partially deleted in new
chr20	1442161	1457090	chr20:1442161-1457090	0	-	1442161	1442161	8553170	7	1750,165,138,110,93,166,1377,	0,3504,10331,10869,12051,12805,13552,
#Partially deleted in new
chr20	1442161	1466918	chr20:1442161-1466918	1	-	1443748	1466824	0	10	1750,165,138,110,93,166,6,75,98,199,	0,3504,10331,10869,12051,12805,13552,16038,22167,24558,
#Partially deleted in new
chr20	1442161	1466905	chr20:1442161-1466905	0	-	1458271	1466824	789624	8	1750,165,138,110,93,71,75,186,	0,3504,10331,10869,12051,12805,16038,24558,
#Partially deleted in new
chr20	1443734	1466824	chr20:1443734-1466824	0	-	1446109	1466824	789624	9	177,484,138,110,93,166,75,98,105,	0,1931,8758,9296,10478,11232,14465,20594,22985,
#Partially deleted in new
chr20	1445665	1466835	chr20:1445665-1466835	0	-	1458271	1466824	789624	7	165,138,110,93,166,75,116,	0,6827,7365,8547,9301,12534,21054,
#Partially deleted in new
chr20	1452544	1466829	chr20:1452544-1466829	0	-	1463428	1466824	789624	8	86,110,93,166,75,107,98,110,	0,486,1668,2422,5655,10790,11784,14175,
#Partially deleted in new
chr20	1453119	1473842	chr20:1453119-1473842	0	-	1453119	1453119	8553170	7	21,93,71,75,298,143,51,	0,1093,1847,5080,19595,19998,20672,
#Partially deleted in new
chr20	1454212	1466824	chr20:1454212-1466824	0	-	1455830	1466824	789624	6	93,166,157,75,98,105,	0,754,1501,3987,10116,12507,
#Partially deleted in new
chr20	1457954	1466849	chr20:1457954-1466849	0	-	1457954	1457954	8553170	2	320,130,	0,8765,
#Partially deleted in new
chr20	1458029	1466832	chr20:1458029-1466832	0	-	1458029	1458029	8553170	3	245,98,113,	0,6299,8690,
#Partially deleted in new
chr20	1463905	1466822	chr20:1463905-1466822	0	-	1463905	1463905	8553170	2	521,103,	0,2814,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	1470740	1491518	chr20:1470740-1491518	0	-	1473859	1491359	789624	8	392,298,143,79,66,342,366,244,	0,1974,2377,3051,6597,7525,8959,20534,
#Partially deleted in new
chr20	1472667	1491587	chr20:1472667-1491587	0	-	1473859	1491359	789624	7	345,94,79,66,342,366,313,	0,450,1124,4670,5598,7032,18607,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	1474590	1491396	chr20:1474590-1491396	3	-	1476166	1491359	789624	5	1746,66,342,366,122,	0,2747,3675,5109,16684,
#Partially deleted in new
chr20	1476139	1491481	chr20:1476139-1491481	1	-	1476166	1491359	789624	5	197,66,342,72,207,	0,1198,2126,3854,15135,
#Partially deleted in new
chr20	1476804	1491383	chr20:1476804-1491383	0	-	1476804	1476804	8553170	4	599,342,72,109,	0,1461,3189,14470,
#Partially deleted in new
chr20	1478359	1480436	chr20:1478359-1480436	0	-	1478359	1478359	8553170	3	248,140,143,	0,1566,1934,
#Partially deleted in new
chr20	1478503	1491413	chr20:1478503-1491413	0	-	1479758	1491359	789624	4	104,95,140,139,	0,1196,1422,12771,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	1479133	1491453	chr20:1479133-1491453	0	-	1479133	1479133	8553170	2	932,179,	0,12141,
#Partially deleted in new
chr20	1516758	1557653	chr20:1516758-1557653	7	-	1516758	1516758	16724991	6	287,315,316,348,364,90,	0,4804,16720,34932,37188,40805,
#Deleted in new
chr20	1529055	1529159	chr20:1529055-1529159	3	-	1529055	1529055	8553170	1	104,	0,
#Partially deleted in new
chr20	1534250	1557705	chr20:1534250-1557705	1	-	1534424	1557653	789624	4	191,159,348,125,	0,2904,17440,23330,
#Partially deleted in new
chr20	1534250	1558843	chr20:1534250-1558843	3	-	1534424	1557653	789624	4	191,156,348,1263,	0,2904,17440,23330,
#Partially deleted in new
chr20	1534250	1551939	chr20:1534250-1551939	0	-	1534424	1551939	789624	3	191,156,69,	0,2904,17620,
#Partially deleted in new
chr20	1540143	1611563	chr20:1540143-1611563	0	-	1540284	1611563	789624	3	192,164,207,	0,17437,71213,
#Partially deleted in new
chr20	1551937	1588669	chr20:1551937-1588669	0	-	1551937	1588632	789624	3	101,357,110,	0,26400,36622,
#Partially deleted in new
chr20	1551959	1620009	chr20:1551959-1620009	3	-	1551963	1619944	789624	3	90,357,141,	0,26378,67909,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	1563520	1620009	chr20:1563520-1620009	3	-	1566154	1619944	0	6	1977,115,333,318,357,141,	0,2632,7284,8199,14817,56348,
#Partially deleted in new
chr20	1564382	1619996	chr20:1564382-1619996	1	-	1566154	1619944	0	4	1115,115,357,128,	0,1770,13955,55486,
#Partially deleted in new
chr20	1564383	1588632	chr20:1564383-1588632	1	-	1566154	1588632	789624	4	1114,115,357,73,	0,1769,13954,24176,
#Partially deleted in new
chr20	1565204	1611420	chr20:1565204-1611420	0	-	1566154	1611420	789624	3	293,115,64,	0,948,46152,
#Partially deleted in new
chr20	1566229	1588747	chr20:1566229-1588747	0	-	1566229	1588632	789624	3	38,357,188,	0,12108,22330,
#Deleted in new
chr20	1570516	1571912	chr20:1570516-1571912	0	-	1570781	1571912	789624	2	621,193,	0,1203,
#Partially deleted in new
chr20	1578149	1620061	chr20:1578149-1620061	0	-	1578149	1578149	8553170	3	47,357,193,	0,188,41719,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	1591391	1591848	chr20:1591391-1591848	7	+	1591391	1591391	16724991	1	457,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	1597339	1620009	chr20:1597339-1620009	1	-	1598823	1619944	0	6	943,115,333,318,357,141,	0,1482,6470,7402,14017,22529,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	1597339	1603930	chr20:1597339-1603930	0	-	1598823	1603930	789624	3	671,115,121,	0,1482,6470,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	1597339	1603930	chr20:1597339-1603930	0	-	1598823	1603930	789624	3	692,115,121,	0,1482,6470,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	1597339	1603930	chr20:1597339-1603930	0	-	1598823	1603930	789624	3	711,115,121,	0,1482,6470,
#Partially deleted in new
chr20	1597746	1620009	chr20:1597746-1620009	1	-	1598823	1619944	0	6	437,115,333,318,357,141,	0,1075,6063,6995,13610,22122,
#Partially deleted in new
chr20	1604974	1619986	chr20:1604974-1619986	0	-	1604974	1604974	8553170	4	85,96,357,118,	0,874,6382,14894,
#Partially deleted in new
chr20	1629151	1657779	chr20:1629151-1657779	3	-	1630223	1657714	0	6	485,85,333,318,357,138,	0,1070,6115,7036,19900,28490,
#Partially deleted in new
chr20	1629151	1657756	chr20:1629151-1657756	1	-	1630223	1657714	0	4	485,85,357,115,	0,1070,19900,28490,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	1629151	1651377	chr20:1629151-1651377	1	-	1630223	1649382	0	6	485,85,333,318,357,154,	0,1070,6115,7036,19900,22072,
#Partially deleted in new
chr20	1629151	1657779	chr20:1629151-1657779	1	-	1630223	1657714	0	5	485,85,318,357,138,	0,1070,7036,19900,28490,
#Deleted in new
chr20	1629151	1630836	chr20:1629151-1630836	0	-	1629151	1629151	8553170	3	485,85,142,	0,1070,1543,
#Deleted in new
chr20	1629526	1630643	chr20:1629526-1630643	0	-	1629526	1629526	8553170	3	110,85,230,	0,695,887,
#Partially deleted in new
chr20	1630223	1657714	chr20:1630223-1657714	1	-	1630223	1657714	0	4	83,318,357,73,	0,5964,18828,27418,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	1633507	1648472	chr20:1633507-1648472	3	+	1633507	1633507	789624	3	213,145,2437,	0,3698,12528,
#Partially deleted in new
chr20	1633625	1638454	chr20:1633625-1638454	1	+	1633625	1633625	8553170	4	95,145,125,45,	0,3580,3992,4784,
#Partially deleted in new
chr20	1665282	1708200	chr20:1665282-1708200	7	-	1665282	1665282	16724991	5	112,327,317,388,72,	0,4632,5598,32109,42846,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	1666359	1666640	chr20:1666359-1666640	3	+	1666359	1666359	8553170	1	281,	0,
#Deleted in new
chr20	1676661	1676907	chr20:1676661-1676907	7	-	1676661	1676661	16724991	1	246,	0,
#Deleted in new
chr20	1722044	1722537	chr20:1722044-1722537	7	-	1722044	1722044	16724991	1	493,	0,
#Deleted in new
chr20	1756755	1758940	chr20:1756755-1758940	7	-	1756755	1756755	16724991	1	2185,	0,
#Partially deleted in new
chr20	1767956	1779995	chr20:1767956-1779995	7	-	1767956	1767956	16724991	5	110,327,286,310,334,	0,1158,5277,10582,11705,
#Partially deleted in new
chr20	1773364	1779746	chr20:1773364-1779746	4	-	1773364	1773364	16724991	4	178,155,329,85,	0,1146,5155,6297,
#Partially deleted in new
chr20	1804015	1817606	chr20:1804015-1817606	3	-	1804015	1804015	8553170	4	77,121,110,38,	0,6538,7099,13553,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	1888127	1891202	chr20:1888127-1891202	1	-	1888127	1888127	8553170	3	182,77,419,	0,1399,2656,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	1890074	1890747	chr20:1890074-1890747	0	-	1890074	1890074	8553170	1	673,	0,
#Partially deleted in new
chr20	1890220	1894374	chr20:1890220-1894374	3	-	1890220	1890220	8553170	3	307,385,256,	0,563,3898,
#Partially deleted in new
chr20	1894166	1939894	chr20:1894166-1939894	3	+	1895447	1937568	0	9	351,88,357,318,333,114,25,40,2575,	0,1272,20932,27228,28146,30597,33708,40548,43153,
#Partially deleted in new
chr20	1894507	1940592	chr20:1894507-1940592	1	+	1895447	1937568	0	9	10,88,357,318,333,114,25,52,3273,	0,931,20591,26887,27805,30256,33367,40207,42812,
#Partially deleted in new
chr20	1894782	1939897	chr20:1894782-1939897	1	+	1895447	1937568	0	9	14,88,357,318,333,114,25,40,2578,	0,656,20316,26612,27530,29981,33092,39932,42537,
#Partially deleted in new
chr20	1895295	1939897	chr20:1895295-1939897	1	+	1895447	1937568	0	8	231,357,318,333,114,25,40,2578,	0,19803,26099,27017,29468,32579,39419,42024,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	1947245	2007517	chr20:1947245-2007517	3	+	1947245	1947245	789624	4	406,70,740,586,	0,4233,18358,59686,
#Partially deleted in new
chr20	1978756	1994285	chr20:1978756-1994285	3	-	1980322	1983084	0	3	2202,148,375,	0,4199,15154,
#Partially deleted in new
chr20	1978756	1993748	chr20:1978756-1993748	1	-	1980322	1983084	0	4	2202,148,60,62,	0,4199,13827,14930,
#Partially deleted in new
chr20	1978758	1994057	chr20:1978758-1994057	1	-	1980322	1983084	0	4	2200,148,60,147,	0,4197,13825,15152,
#Partially deleted in new
chr20	2075554	2075822	chr20:2075554-2075822	7	+	2075554	2075554	16724991	1	268,	0,
#Partially deleted in new
chr20	2101610	2148555	chr20:2101610-2148555	3	+	2101881	2117378	789624	4	565,598,750,4772,	0,1157,15055,42173,
#Partially deleted in new
chr20	2102890	2177038	chr20:2102890-2177038	0	+	2102890	2117378	789624	4	475,750,107,263,	0,13775,70413,73885,
#Partially deleted in new
chr20	2207216	2213151	chr20:2207216-2213151	0	+	2207216	2207216	8553170	2	172,243,	0,5692,
#Partially deleted in new
chr20	2207226	2213151	chr20:2207226-2213151	3	+	2207226	2207226	8553170	2	293,243,	0,5682,
#Partially deleted in new
chr20	2296000	2341078	chr20:2296000-2341078	3	+	2296063	2340581	0	13	70,174,240,119,129,178,136,104,246,309,158,134,645,	0,13656,14177,15010,16897,21067,21349,29848,32119,36001,39115,43853,44433,
#Partially deleted in new
chr20	2312977	2326003	chr20:2312977-2326003	0	+	2312977	2312977	8553170	4	49,178,136,155,	0,4090,4372,12871,
#Partially deleted in new
chr20	2380907	2432753	chr20:2380907-2432753	3	+	2380968	2432643	789624	13	68,174,243,119,129,178,139,104,243,342,155,134,264,	0,13544,14286,15598,17010,18653,19398,22489,22673,36324,49538,49986,51582,
#Partially deleted in new
chr20	2380907	2432753	chr20:2380907-2432753	1	+	2380968	2432534	789624	12	68,174,243,119,129,178,139,104,243,342,155,264,	0,13544,14286,15598,17010,18653,19398,22489,22673,36324,49538,51582,
#Partially deleted in new
chr20	2394451	2400444	chr20:2394451-2400444	0	+	2394451	2394451	8553170	4	174,129,178,139,	0,3466,5109,5854,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	2453009	2453117	chr20:2453009-2453117	3	-	2453009	2453009	8553170	1	108,	0,
#Partially deleted in new
chr20	2461633	2470853	chr20:2461633-2470853	3	-	2461928	2470690	0	7	306,126,139,153,112,152,166,	0,1002,1455,2113,4074,5973,9054,
#Partially deleted in new
chr20	2461633	2470853	chr20:2461633-2470853	1	-	2461755	2470690	0	7	160,126,139,153,112,152,166,	0,1002,1455,2113,4074,5973,9054,
#Partially deleted in new
chr20	2461659	2470732	chr20:2461659-2470732	0	-	2467257	2470690	789624	8	134,126,139,153,112,124,152,45,	0,976,1429,2087,4048,5532,5947,9028,
#Partially deleted in new
chr20	2467211	2508907	chr20:2467211-2508907	3	-	2467720	2493895	789624	7	104,152,127,59,267,87,27,	0,395,25487,26307,26566,33444,41669,
#Partially deleted in new
chr20	2481816	2509132	chr20:2481816-2509132	3	-	2483160	2493895	789624	6	2840,127,59,267,87,252,	0,10882,11702,11961,18839,27064,
#Partially deleted in new
chr20	2481816	2493030	chr20:2481816-2493030	0	-	2481816	2481816	8553170	2	2840,332,	0,10882,
#Partially deleted in new
chr20	2481822	2509132	chr20:2481822-2509132	1	-	2483160	2492732	789624	4	2834,127,87,252,	0,10876,18833,27058,
#Partially deleted in new
chr20	2484526	2524702	chr20:2484526-2524702	0	-	2484526	2493895	789624	7	130,127,59,267,110,87,248,	0,8172,8992,9251,10888,16129,39928,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	2491840	2508915	chr20:2491840-2508915	1	-	2492031	2493895	789624	6	244,127,59,267,87,35,	0,858,1678,1937,8815,17040,
#Partially deleted in new
chr20	2492698	2508901	chr20:2492698-2508901	0	-	2492698	2493895	789624	5	127,59,267,87,102,	0,820,1079,7957,16101,
#Partially deleted in new
chr20	2536606	2641784	chr20:2536606-2641784	3	+	2536621	2641351	789624	20	49,48,319,153,91,82,107,99,143,148,189,180,150,129,68,240,126,79,118,651,	0,662,21849,25251,35572,42539,43343,55703,58218,60544,65506,73812,75584,76587,79530,80465,87664,99319,100867,104527,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr20	2558214	2618357	chr20:2558214-2618357	0	+	2558214	2558214	8553170	15	560,153,91,82,107,99,143,148,189,180,150,33,188,68,1286,	0,3643,13964,20931,21735,34095,36610,38936,43898,52204,53976,54979,55618,57922,58857,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	2602165	2618379	chr20:2602165-2618379	0	+	2602165	2613448	789624	6	136,180,150,827,68,1308,	0,8253,10025,11028,13971,14906,
#Partially deleted in new
chr20	2652144	2658393	chr20:2652144-2658393	3	+	2652660	2658294	789624	12	519,90,115,162,199,188,152,101,149,122,138,465,	0,697,1134,2269,2604,3180,3450,3789,4256,4629,4936,5784,
#Partially deleted in new
chr20	2652631	2655512	chr20:2652631-2655512	0	+	2652631	2652631	8553170	7	32,90,115,133,162,199,188,	0,210,647,1544,1782,2117,2693,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	2652632	2653820	chr20:2652632-2653820	0	+	2652632	2652632	8553170	3	31,90,542,	0,209,646,
#Partially deleted in new
chr20	2652645	2655512	chr20:2652645-2655512	0	+	2652645	2652645	8553170	5	286,115,162,199,188,	0,633,1768,2103,2679,
#Partially deleted in new
chr20	2652648	2655512	chr20:2652648-2655512	0	+	2652660	2655512	789624	6	15,90,115,162,199,275,	0,193,630,1765,2100,2589,
#Deleted in new
chr20	2652776	2652842	chr20:2652776-2652842	3	+	2652776	2652776	5263520	1	66,	0,
#Partially deleted in new
chr20	2653000	2655512	chr20:2653000-2655512	0	+	2653000	2653000	8553170	5	173,115,162,199,188,	0,278,1413,1748,2324,
#Deleted in new
chr20	2654211	2654286	chr20:2654211-2654286	3	+	2654211	2654211	789624	1	75,	0,
#Deleted in new
chr20	2654233	2655512	chr20:2654233-2655512	0	+	2654233	2654233	8553170	3	342,199,188,	0,515,1091,
#Deleted in new
chr20	2654788	2656549	chr20:2654788-2656549	0	+	2654788	2654788	8553170	5	159,188,152,281,149,	0,536,806,1145,1612,
#Deleted in new
chr20	2655066	2655198	chr20:2655066-2655198	3	+	2655066	2655066	789624	1	132,	0,
#Deleted in new
chr20	2655096	2656549	chr20:2655096-2656549	0	+	2655096	2655096	8553170	4	416,152,281,149,	0,498,837,1304,
#Deleted in new
chr20	2655412	2658392	chr20:2655412-2658392	0	+	2655412	2655412	8553170	1	2980,	0,
#Deleted in new
chr20	2655435	2658393	chr20:2655435-2658393	0	+	2655435	2657390	789624	8	77,152,101,149,122,138,116,465,	0,159,498,965,1338,1645,1937,2493,
#Deleted in new
chr20	2655546	2658393	chr20:2655546-2658393	0	+	2655546	2655546	8553170	2	1349,1313,	0,1534,
#Deleted in new
chr20	2655615	2658359	chr20:2655615-2658359	0	+	2655615	2657390	789624	6	131,101,149,122,138,987,	0,318,785,1158,1465,1757,
#Deleted in new
chr20	2655945	2658393	chr20:2655945-2658393	0	+	2655945	2655945	8553170	5	269,149,122,138,465,	0,455,828,1135,1983,
#Deleted in new
chr20	2656096	2656182	chr20:2656096-2656182	3	+	2656096	2656096	789624	1	86,	0,
#Deleted in new
chr20	2656110	2658393	chr20:2656110-2658393	0	+	2656110	2656110	8553170	6	104,149,122,138,116,465,	0,290,663,970,1262,1818,
#Deleted in new
chr20	2656158	2657218	chr20:2656158-2657218	0	+	2656158	2656158	8553170	3	391,122,138,	0,615,922,
#Deleted in new
chr20	2656400	2657449	chr20:2656400-2657449	0	+	2656400	2656400	8553170	3	149,122,369,	0,373,680,
#Deleted in new
chr20	2656409	2657225	chr20:2656409-2657225	0	+	2656409	2656409	8553170	2	140,452,	0,364,
#Deleted in new
chr20	2656623	2656694	chr20:2656623-2656694	3	+	2656623	2656623	789624	1	71,	0,
#Deleted in new
chr20	2656639	2658393	chr20:2656639-2658393	0	+	2656639	2656639	8553170	3	256,138,465,	0,441,1289,
#Deleted in new
chr20	2656938	2657010	chr20:2656938-2657010	3	+	2656938	2656938	789624	1	72,	0,
#Deleted in new
chr20	2656948	2658393	chr20:2656948-2658393	0	+	2656948	2656948	8553170	2	270,465,	0,980,
#Partially deleted in new
chr20	2658394	2664219	chr20:2658394-2664219	3	-	2658750	2664188	789624	12	443,61,95,147,103,134,133,61,121,99,81,67,	0,1130,1304,1635,1868,2062,2302,2514,5051,5265,5530,5758,
#Partially deleted in new
chr20	2658394	2664219	chr20:2658394-2664219	1	-	2658441	2664188	789624	12	128,61,95,147,103,134,133,61,121,99,81,67,	0,1130,1304,1635,1868,2062,2302,2514,5051,5265,5530,5758,
#Deleted in new
chr20	2658394	2660308	chr20:2658394-2660308	0	-	2658750	2660308	789624	6	128,200,61,95,147,46,	0,243,1130,1304,1635,1868,
#Partially deleted in new
chr20	2658394	2664189	chr20:2658394-2664189	1	-	2658508	2664188	789624	13	128,79,61,95,147,103,134,133,61,121,99,81,37,	0,364,1130,1304,1635,1868,2062,2302,2514,5051,5265,5530,5758,
#Partially deleted in new
chr20	2658394	2664188	chr20:2658394-2664188	0	-	2658394	2658394	8553170	11	443,61,95,147,103,373,61,121,99,81,36,	0,1130,1304,1635,1868,2062,2514,5051,5265,5530,5758,
#Deleted in new
chr20	2658394	2660359	chr20:2658394-2660359	0	-	2658394	2658394	8553170	5	128,200,61,478,97,	0,243,1130,1304,1868,
#Deleted in new
chr20	2658541	2660309	chr20:2658541-2660309	0	-	2659698	2660309	789624	5	296,61,95,109,47,	0,983,1157,1526,1721,
#Partially deleted in new
chr20	2659014	2664219	chr20:2659014-2664219	1	-	2659252	2664188	789624	12	298,61,95,147,103,134,133,61,121,99,81,67,	0,510,684,1015,1248,1442,1682,1894,4431,4645,4910,5138,
#Deleted in new
chr20	2659282	2659916	chr20:2659282-2659916	0	-	2659282	2659282	8553170	2	303,218,	0,416,
#Deleted in new
chr20	2660031	2660553	chr20:2660031-2660553	0	-	2660031	2660031	8553170	2	145,291,	0,231,
#Partially deleted in new
chr20	2660295	2664215	chr20:2660295-2664215	0	-	2660295	2660295	8553170	6	534,61,121,99,81,63,	0,613,3150,3364,3629,3857,
#Partially deleted in new
chr20	2660504	2664209	chr20:2660504-2664209	0	-	2660504	2660504	8553170	5	465,121,99,81,57,	0,2941,3155,3420,3648,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	2664351	2665874	chr20:2664351-2665874	3	+	2664351	2664351	8553170	2	255,617,	0,906,
#Partially deleted in new
chr20	2692877	2760107	chr20:2692877-2760107	1	+	2693145	2758979	789624	18	271,122,157,64,56,74,69,82,118,134,127,89,66,178,189,198,76,840,	0,783,12699,13096,13331,15069,16696,55671,56523,56742,56969,58822,59044,59208,59479,62749,66031,66390,
#Partially deleted in new
chr20	2692877	2760101	chr20:2692877-2760101	0	+	2693145	2758921	789624	18	271,122,157,64,56,74,69,82,118,134,127,89,66,178,189,82,76,834,	0,783,12699,13096,13331,15069,16696,55671,56523,56742,56969,58822,59044,59208,59479,62865,66031,66390,
#Partially deleted in new
chr20	2692878	2760101	chr20:2692878-2760101	0	+	2692878	2758979	789624	18	72,122,157,64,56,74,69,82,118,134,127,89,66,178,189,198,76,834,	0,782,12698,13095,13330,15068,16695,55670,56522,56741,56968,58821,59043,59207,59478,62748,66030,66389,
#Partially deleted in new
chr20	2692878	2706237	chr20:2692878-2706237	0	+	2692878	2692878	8553170	5	72,122,157,64,29,	0,782,12698,13095,13330,
#Partially deleted in new
chr20	2693573	2759393	chr20:2693573-2759393	3	+	2693645	2758979	789624	17	209,157,64,56,74,69,82,118,134,127,89,66,178,189,198,76,126,	0,12003,12400,12635,14373,16000,54975,55827,56046,56273,58126,58348,58512,58783,62053,65335,65694,
#Partially deleted in new
chr20	2693573	2760071	chr20:2693573-2760071	0	+	2693573	2693573	8553170	16	209,157,64,56,74,69,82,118,134,127,89,342,189,198,149,804,	0,12003,12400,12635,14373,16000,54975,55827,56046,56273,58126,58348,58783,62053,65262,65694,
#Partially deleted in new
chr20	2693688	2749420	chr20:2693688-2749420	0	+	2693688	2693688	8553170	7	94,157,64,56,74,82,20,	0,11888,12285,12520,14258,54860,55712,
#Partially deleted in new
chr20	2706240	2760077	chr20:2706240-2760077	0	+	2706240	2759969	789624	6	24,74,69,82,118,275,	0,1706,3333,42308,43160,53562,
#Deleted in new
chr20	2751690	2755662	chr20:2751690-2755662	0	+	2751690	2751690	8553170	4	98,342,189,36,	0,231,666,3936,
#Partially deleted in new
chr20	2752495	2760108	chr20:2752495-2760108	0	+	2752495	2752495	8553170	3	50,23,226,	0,3131,7387,
#Partially deleted in new
chr20	2755087	2760101	chr20:2755087-2760101	0	+	2755087	2755087	8553170	3	737,76,834,	0,3821,4180,
#Partially deleted in new
chr20	2780613	2781041	chr20:2780613-2781041	7	+	2780613	2780613	16724991	1	428,	0,
#Partially deleted in new
chr20	2794068	2800637	chr20:2794068-2800637	3	-	2794189	2800572	789624	14	363,103,140,298,180,197,124,89,151,91,140,110,168,237,	0,468,1208,1530,1913,2178,2458,2937,3123,3899,4083,4359,4657,6332,
#Deleted in new
chr20	2814967	2818066	chr20:2814967-2818066	3	+	2815184	2817048	789624	3	50,293,1523,	0,184,1576,
#Deleted in new
chr20	2814986	2815793	chr20:2814986-2815793	1	+	2815184	2815775	789624	3	31,293,256,	0,165,551,
#Deleted in new
chr20	2815010	2815833	chr20:2815010-2815833	3	+	2815184	2815775	789624	2	434,296,	0,527,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	2816301	2820284	chr20:2816301-2820284	1	+	2816334	2817013	789624	2	114,3778,	0,205,
#Deleted in new
chr20	2816332	2817031	chr20:2816332-2817031	3	+	2816554	2817013	789624	2	83,488,	0,211,
#Deleted in new
chr20	2835313	2841190	chr20:2835313-2841190	1	-	2835461	2839912	789624	8	396,276,247,151,86,80,145,325,	0,725,2918,3282,3530,3878,4475,5552,
#Deleted in new
chr20	2835313	2840692	chr20:2835313-2840692	3	-	2835461	2839912	789624	8	396,276,247,151,239,80,145,482,	0,725,2918,3282,3530,3878,4475,4897,
#Deleted in new
chr20	2835313	2838366	chr20:2835313-2838366	0	-	2835461	2838366	789624	2	396,135,	0,2918,
#Deleted in new
chr20	2835313	2838936	chr20:2835313-2838936	0	-	2835313	2835313	8553170	4	396,72,151,93,	0,725,3282,3530,
#Deleted in new
chr20	2838231	2841190	chr20:2838231-2841190	0	-	2838231	2839912	789624	6	247,151,239,80,145,325,	0,364,612,960,1557,2634,
#Deleted in new
chr20	2838231	2840671	chr20:2838231-2840671	0	-	2838231	2839912	789624	6	247,151,86,80,145,461,	0,364,612,960,1557,1979,
#Partially deleted in new
chr20	2840702	2866732	chr20:2840702-2866732	3	+	2840774	2866574	0	24	125,89,98,129,145,116,123,56,90,95,77,132,128,36,109,135,109,98,108,78,170,97,104,303,	0,19016,19351,19536,19746,20045,20267,20522,20912,21102,21351,21876,22104,22362,22587,23246,23476,23662,23844,24275,24445,24696,25509,25727,
#Partially deleted in new
chr20	2840702	2866732	chr20:2840702-2866732	1	+	2840774	2866574	0	20	125,89,98,129,145,116,123,56,90,36,109,135,109,98,108,78,170,97,104,303,	0,19016,19351,19536,19746,20045,20267,20522,20912,22362,22587,23246,23476,23662,23844,24275,24445,24696,25509,25727,
#Partially deleted in new
chr20	2840759	2864082	chr20:2840759-2864082	0	+	2859792	2864082	789624	10	68,89,145,116,123,56,90,36,109,134,	0,18959,19689,19988,20210,20465,20855,22305,22530,23189,
#Partially deleted in new
chr20	2840762	2862093	chr20:2840762-2862093	0	+	2859792	2862093	789624	9	65,89,145,116,123,56,90,95,40,	0,18956,19686,19985,20207,20462,20852,21042,21291,
#Partially deleted in new
chr20	2860969	2864230	chr20:2860969-2864230	0	+	2860969	2860969	8553170	11	123,56,90,95,11,108,128,36,109,135,52,	0,255,645,835,1084,1633,1837,2095,2320,2979,3209,
#Partially deleted in new
chr20	2862456	2866732	chr20:2862456-2866732	0	+	2862456	2862456	8553170	12	478,36,109,135,109,98,108,78,170,97,104,303,	0,608,833,1492,1722,1908,2090,2521,2691,2942,3755,3973,
#Partially deleted in new
chr20	2863370	2865038	chr20:2863370-2865038	0	+	2863370	2863370	8553170	5	28,339,98,108,61,	0,578,994,1176,1607,
#Partially deleted in new
chr20	2864183	3038674	chr20:2864183-3038674	3	+	2964277	3038133	789624	28	104,98,108,78,170,79,43,79,342,27,85,74,137,91,77,37,98,120,167,136,150,94,77,135,126,152,136,616,	0,181,363,794,964,59023,83798,100088,100677,111031,122581,123848,124154,140872,143160,151665,153632,157125,157870,158505,160288,162503,162937,163523,171401,171606,172970,173875,
#Deleted in new
chr20	2865910	2866732	chr20:2865910-2866732	0	+	2865910	2865910	8553170	2	405,303,	0,519,
#Partially deleted in new
chr20	2873419	3005104	chr20:2873419-3005104	0	+	2964277	3005104	789624	7	341,79,342,85,74,137,49,	0,90852,91441,113345,114612,114918,131636,
#Partially deleted in new
chr20	2873488	3039076	chr20:2873488-3039076	1	+	2964277	3038133	789624	23	272,79,43,79,342,85,74,137,91,77,37,98,120,167,136,150,94,77,135,126,152,136,1018,	0,49718,74493,90783,91372,113276,114543,114849,131567,133855,142360,144327,147820,148565,149200,150983,153198,153632,154218,162096,162301,163665,164570,
#Partially deleted in new
chr20	2873495	3038668	chr20:2873495-3038668	1	+	2964277	3038133	789624	24	265,79,43,79,342,27,85,74,137,91,77,37,98,120,167,136,150,94,77,135,126,152,136,610,	0,49711,74486,90776,91365,101719,113269,114536,114842,131560,133848,142353,144320,147813,148558,149193,150976,153191,153625,154211,162089,162294,163658,164563,
#Partially deleted in new
chr20	2873517	2965202	chr20:2873517-2965202	0	+	2964277	2965202	789624	4	243,43,79,342,	0,74464,90754,91343,
#Partially deleted in new
chr20	2873682	3038674	chr20:2873682-3038674	1	+	2964277	3038133	789624	24	78,79,43,90,79,342,85,74,137,91,77,37,98,120,167,136,150,94,77,135,126,152,136,616,	0,49524,74299,81926,90589,91178,113082,114349,114655,131373,133661,142166,144133,147626,148371,149006,150789,153004,153438,154024,161902,162107,163471,164376,
#Partially deleted in new
chr20	2873682	2986849	chr20:2873682-2986849	0	+	2964277	2986849	789624	7	78,79,43,79,342,27,85,	0,49524,74299,90589,91178,101532,113082,
#Partially deleted in new
chr20	2923206	3038668	chr20:2923206-3038668	1	+	2964277	3038133	789624	23	79,43,90,79,342,85,74,137,91,77,37,98,120,167,136,150,94,77,135,126,152,136,610,	0,24775,32402,41065,41654,63558,64825,65131,81849,84137,92642,94609,98102,98847,99482,101265,103480,103914,104500,112378,112583,113947,114852,
#Deleted in new
chr20	3043621	3045747	chr20:3043621-3045747	3	+	3044414	3045736	789624	4	44,161,158,62,	0,786,1057,2064,
#Deleted in new
chr20	3043621	3045747	chr20:3043621-3045747	1	+	3044414	3045736	789624	4	44,161,137,62,	0,786,1078,2064,
#Deleted in new
chr20	3044009	3045747	chr20:3044009-3045747	1	+	3044414	3045736	789624	3	559,137,62,	0,690,1676,
#Deleted in new
chr20	3044411	3045747	chr20:3044411-3045747	1	+	3044414	3045736	789624	3	157,134,62,	0,291,1274,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	3045944	3048254	chr20:3045944-3048254	3	+	3046068	3047869	0	4	336,147,124,520,	0,428,669,1790,
#Deleted in new
chr20	3071619	3072517	chr20:3071619-3072517	3	+	3071655	3072418	789624	3	156,202,155,	0,457,743,
#Partially deleted in new
chr20	3082555	3084724	chr20:3082555-3084724	3	-	3082629	3084674	789624	3	247,202,170,	0,421,1999,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	3094170	3094509	chr20:3094170-3094509	3	+	3094170	3094170	8553170	1	339,	0,
#Partially deleted in new
chr20	3106912	3150867	chr20:3106912-3150867	3	+	3106912	3106912	789624	7	659,276,176,86,109,156,330,	0,2562,3365,3719,4731,29090,43625,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	3107572	3160196	chr20:3107572-3160196	3	-	3110105	3123365	789624	5	2742,162,1201,95,431,	0,7732,13811,15739,52193,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	3107572	3160196	chr20:3107572-3160196	1	-	3110105	3123365	789624	4	2742,1201,95,431,	0,13811,15739,52193,
#Partially deleted in new
chr20	3110636	3116723	chr20:3110636-3116723	0	+	3110636	3110636	8553170	3	81,109,235,	0,1007,5852,
#Partially deleted in new
chr20	3122373	3159876	chr20:3122373-3159876	0	-	3122373	3123365	789624	4	211,95,107,111,	0,938,34310,37392,
#Partially deleted in new
chr20	3146518	3159897	chr20:3146518-3159897	3	-	3146775	3149070	789624	2	2742,132,	0,13247,
#Deleted in new
chr20	3162616	3168561	chr20:3162616-3168561	1	-	3164453	3167163	789624	3	2536,864,1857,	0,2880,4088,
#Partially deleted in new
chr20	3162616	3173546	chr20:3162616-3173546	1	-	3164453	3167163	789624	6	2536,132,594,477,224,92,	0,2880,3150,4088,5121,10838,
#Partially deleted in new
chr20	3162616	3173546	chr20:3162616-3173546	1	-	3164453	3167163	789624	6	2536,132,594,477,224,92,	0,2880,3150,4088,5121,10838,
#Partially deleted in new
chr20	3162617	3173592	chr20:3162617-3173592	3	-	3164453	3167163	789624	5	2535,864,477,224,138,	0,2879,4087,5120,10837,
#Partially deleted in new
chr20	3190349	3204685	chr20:3190349-3204685	3	-	3190652	3204627	789624	9	470,49,57,39,123,102,113,204,149,	0,840,1415,4480,4881,9651,9992,12863,14187,
#Deleted in new
chr20	3190349	3191584	chr20:3190349-3191584	0	-	3190349	3190349	8553170	2	470,395,	0,840,
#Partially deleted in new
chr20	3190519	3195314	chr20:3190519-3195314	0	-	3190519	3190519	8553170	4	300,57,39,84,	0,1245,4310,4711,
#Partially deleted in new
chr20	3191423	3204685	chr20:3191423-3204685	1	-	3191596	3204627	789624	7	398,39,123,102,113,204,149,	0,3406,3807,8577,8918,11789,13113,
#Partially deleted in new
chr20	3208867	3223870	chr20:3208867-3223870	0	+	3208867	3208867	789624	7	166,58,74,32,116,77,505,	0,4301,5117,6413,9649,12973,14498,
#Partially deleted in new
chr20	3208897	3218596	chr20:3208897-3218596	0	+	3208897	3208897	8553170	6	136,58,108,74,32,80,	0,4271,4421,5087,6383,9619,
#Partially deleted in new
chr20	3209359	3223870	chr20:3209359-3223870	3	+	3209551	3223462	0	8	258,58,65,74,32,116,77,505,	0,3809,3959,4625,5921,9157,12481,14006,
#Partially deleted in new
chr20	3209488	3223870	chr20:3209488-3223870	0	+	3209488	3209488	5263520	7	47,126,74,32,116,77,505,	0,3769,4496,5792,9028,12352,13877,
#Partially deleted in new
chr20	3209500	3219091	chr20:3209500-3219091	0	+	3209500	3209500	8553170	5	117,126,74,32,575,	0,3757,4484,5780,9016,
#Partially deleted in new
chr20	3209512	3223618	chr20:3209512-3223618	1	+	3209551	3223462	0	8	54,58,65,74,32,116,77,253,	0,3656,3806,4472,5768,9004,12328,13853,
#Partially deleted in new
chr20	3209512	3223870	chr20:3209512-3223870	0	+	3209512	3209512	789624	7	105,58,74,32,116,77,505,	0,3656,4472,5768,9004,12328,13853,
#Partially deleted in new
chr20	3209524	3223870	chr20:3209524-3223870	1	+	3209551	3223462	0	6	93,74,32,116,77,505,	0,4460,5756,8992,12316,13841,
#Partially deleted in new
chr20	3215211	3223449	chr20:3215211-3223449	0	+	3215211	3215211	8553170	4	101,116,77,84,	0,3305,6629,8154,
#Partially deleted in new
chr20	3221752	3223870	chr20:3221752-3223870	0	+	3221752	3221752	8553170	2	165,505,	0,1613,
#Partially deleted in new
chr20	3227416	3237727	chr20:3227416-3237727	3	-	3227786	3237679	789624	19	440,170,196,174,169,107,253,74,133,114,126,94,219,124,82,232,50,153,184,	0,842,1095,1421,1678,1929,2107,2770,3098,3315,3516,3732,3913,6097,6504,6666,7151,7325,10127,
#Partially deleted in new
chr20	3227416	3238166	chr20:3227416-3238166	1	-	3227786	3238064	789624	20	440,170,196,174,169,107,253,74,133,114,126,94,219,124,82,232,50,153,45,274,	0,842,1095,1421,1678,1929,2107,2770,3098,3315,3516,3732,3913,6097,6504,6666,7151,7325,10127,10476,
#Partially deleted in new
chr20	3227421	3239190	chr20:3227421-3239190	1	-	3227786	3239137	789624	20	435,170,196,174,169,107,253,74,133,114,126,94,219,124,82,232,50,153,45,96,	0,837,1090,1416,1673,1924,2102,2765,3093,3310,3511,3727,3908,6092,6499,6661,7146,7320,10122,11673,
#Partially deleted in new
chr20	3227431	3239181	chr20:3227431-3239181	1	-	3227786	3237574	789624	20	425,98,196,174,169,107,253,74,133,114,126,94,147,124,82,232,50,153,45,202,	0,827,1080,1406,1663,1914,2092,2755,3083,3300,3501,3717,3898,6082,6489,6651,7136,7310,10112,11548,
#Partially deleted in new
chr20	3227437	3239190	chr20:3227437-3239190	1	-	3227786	3239137	789624	20	419,170,196,174,169,107,253,74,133,114,126,94,219,124,82,163,50,153,45,96,	0,821,1074,1400,1657,1908,2086,2749,3077,3294,3495,3711,3892,6076,6483,6645,7130,7304,10106,11657,
#Partially deleted in new
chr20	3227438	3239190	chr20:3227438-3239190	1	-	3227786	3239137	789624	19	418,170,196,174,169,107,253,74,133,126,94,219,124,82,232,50,153,45,96,	0,820,1073,1399,1656,1907,2085,2748,3076,3494,3710,3891,6075,6482,6644,7129,7303,10105,11656,
#Partially deleted in new
chr20	3227497	3239190	chr20:3227497-3239190	0	-	3229260	3237574	789624	20	359,170,196,174,169,107,183,74,133,114,126,94,219,124,82,232,50,153,45,211,	0,761,1014,1340,1597,1848,2026,2689,3017,3234,3435,3651,3832,6016,6423,6585,7070,7244,10046,11482,
#Partially deleted in new
chr20	3227635	3239217	chr20:3227635-3239217	1	-	3227786	3239137	789624	20	221,170,196,174,169,107,253,74,133,114,126,94,219,124,82,232,50,153,45,123,	0,623,876,1202,1459,1710,1888,2551,2879,3096,3297,3513,3694,5878,6285,6447,6932,7106,9908,11459,
#Deleted in new
chr20	3228927	3229776	chr20:3228927-3229776	0	-	3228927	3228927	8553170	3	84,358,253,	0,167,596,
#Deleted in new
chr20	3229670	3230560	chr20:3229670-3230560	0	-	3229670	3229670	8553170	2	106,374,	0,516,
#Partially deleted in new
chr20	3234234	3238713	chr20:3234234-3238713	0	-	3234234	3237574	789624	5	80,50,153,45,166,	0,333,507,3309,4313,
#Partially deleted in new
chr20	3234277	3238100	chr20:3234277-3238100	0	-	3234894	3238064	789624	5	37,50,179,45,208,	0,290,464,3266,3615,
#Partially deleted in new
chr20	3237543	3239559	chr20:3237543-3239559	0	-	3237543	3237574	789624	2	45,212,	0,1804,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	3239704	3245382	chr20:3239704-3245382	3	+	3239704	3239704	8553170	1	5678,	0,
#Partially deleted in new
chr20	3249304	3407625	chr20:3249304-3407625	3	-	3252571	3407557	789624	37	3380,94,66,206,75,107,87,136,38,126,159,89,118,102,89,147,104,88,51,71,112,46,45,77,88,37,82,136,56,99,78,107,97,125,120,80,151,	0,4421,5914,6701,10175,10617,15133,21122,29607,32336,38327,40824,44834,45223,47556,48724,55135,65728,66430,67418,68984,72912,73347,75587,76892,81341,82975,91199,94371,99220,110211,124743,125725,126873,132074,133122,158170,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	3295493	3316090	chr20:3295493-3316090	0	-	3295493	3295493	8553170	5	1456,147,104,88,356,	0,2535,8946,19539,20241,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	3360035	3360142	chr20:3360035-3360142	3	+	3360035	3360035	8553170	1	107,	0,
#Deleted in new
chr20	3361879	3362324	chr20:3361879-3362324	7	-	3361879	3361879	16724991	1	445,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	3384228	3384440	chr20:3384228-3384440	3	+	3384228	3384228	8553170	1	212,	0,
#Partially deleted in new
chr20	3465176	3465444	chr20:3465176-3465444	7	-	3465176	3465176	16724991	1	268,	0,
#Partially deleted in new
chr20	3471039	3651122	chr20:3471039-3651122	3	+	3471107	3646847	789624	29	478,84,114,129,206,169,91,244,184,155,85,221,122,139,191,220,186,234,138,94,53,95,79,158,62,79,108,115,4400,	0,64213,69182,74722,76244,78130,88353,89622,91236,92169,94308,101691,104787,105819,107542,111095,112858,113607,120129,123439,125337,126866,129906,133065,153471,163271,167788,173114,175683,
#Deleted in new
chr20	3489528	3491005	chr20:3489528-3491005	7	-	3489528	3489528	16724991	1	1477,	0,
#Deleted in new
chr20	3659291	3663399	chr20:3659291-3663399	1	-	3659908	3663399	789624	6	698,92,135,110,346,46,	0,866,1234,1463,1652,4062,
#Deleted in new
chr20	3659908	3663399	chr20:3659908-3663399	3	-	3659908	3663399	789624	5	81,92,146,535,46,	0,249,617,846,3445,
#Deleted in new
chr20	3660624	3663399	chr20:3660624-3663399	0	-	3660624	3663399	789624	4	47,110,346,46,	0,130,319,2729,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	3667964	3673747	chr20:3667964-3673747	0	-	3667964	3667964	8553170	11	1036,72,92,148,109,199,109,196,90,776,174,	0,1334,1581,3041,3272,3616,3912,4169,4572,4756,5609,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr20	3667969	3682246	chr20:3667969-3682246	3	-	3668962	3682004	0	22	1031,72,92,148,109,78,199,109,196,90,178,143,85,167,72,66,190,77,79,77,80,339,	0,1329,1576,3036,3267,3449,3611,3907,4164,4567,4751,5384,5604,5775,6094,6249,6534,6803,7057,9097,11522,13938,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr20	3667969	3682246	chr20:3667969-3682246	1	-	3668962	3682004	789624	22	1028,72,92,148,109,78,199,109,196,90,178,143,85,167,72,66,190,77,79,77,80,339,	0,1329,1576,3036,3267,3449,3611,3907,4164,4567,4751,5384,5604,5775,6094,6249,6534,6803,7057,9097,11522,13938,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	3667969	3670625	chr20:3667969-3670625	0	-	3667969	3667969	8553170	2	1031,1327,	0,1329,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr20	3667973	3682131	chr20:3667973-3682131	1	-	3668962	3682004	0	21	1027,72,92,148,109,199,109,196,90,178,143,85,167,72,66,190,77,79,77,80,224,	0,1325,1572,3032,3263,3607,3903,4160,4563,4747,5380,5600,5771,6090,6245,6530,6799,7053,9093,11518,13934,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr20	3667973	3682131	chr20:3667973-3682131	1	-	3668962	3682004	789624	20	1024,72,92,148,109,78,199,109,196,90,145,68,72,66,190,77,79,77,80,224,	0,1325,1572,3032,3263,3445,3607,3903,4160,4563,4747,5870,6090,6245,6530,6799,7053,9093,11518,13934,
#Partially deleted in new
chr20	3668581	3682051	chr20:3668581-3682051	1	-	3674942	3682004	789624	10	416,72,92,148,109,39,794,77,80,144,	0,717,964,2424,2655,2837,5730,8485,10910,13326,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr20	3686969	3707128	chr20:3686969-3707128	3	-	3688559	3707128	789624	21	1650,73,103,303,261,300,252,270,252,312,261,303,258,336,258,300,255,267,297,360,49,	0,2185,2630,2992,4370,4933,5551,5892,6477,7251,7693,9616,10115,10828,12232,14372,16227,16855,18774,19377,20110,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	3686969	3693079	chr20:3686969-3693079	0	-	3689905	3693079	789624	5	3295,261,300,252,218,	0,4370,4933,5551,5892,
#Partially deleted in new
chr20	3732666	3753111	chr20:3732666-3753111	3	+	3738674	3752166	789624	13	128,60,98,125,187,105,117,175,87,105,259,104,1601,	0,5991,8148,9617,12235,12826,13248,15550,16565,17083,17302,18137,18844,
#Partially deleted in new
chr20	3732710	3753111	chr20:3732710-3753111	0	+	3742400	3752166	789624	12	84,60,125,187,105,117,175,87,105,259,104,1601,	0,5947,9573,12191,12782,13204,15506,16521,17039,17258,18093,18800,
#Partially deleted in new
chr20	3753507	3767728	chr20:3753507-3767728	1	-	3754057	3760100	789624	6	651,123,139,143,180,66,	0,889,1961,5028,6499,14155,
#Partially deleted in new
chr20	3753507	3768387	chr20:3753507-3768387	3	-	3754057	3760100	789624	6	651,123,139,143,105,725,	0,889,1961,5028,6574,14155,
#Partially deleted in new
chr20	3753507	3767781	chr20:3753507-3767781	0	-	3754057	3760100	789624	6	651,123,139,143,105,573,	0,889,1961,5028,6574,13701,
#Partially deleted in new
chr20	3753507	3758678	chr20:3753507-3758678	0	-	3754057	3758678	789624	3	651,139,143,	0,1961,5028,
#Partially deleted in new
chr20	3777503	3781448	chr20:3777503-3781448	3	-	3778211	3781287	0	7	816,124,61,40,157,112,270,	0,917,1242,1447,1692,2160,3675,
#Partially deleted in new
chr20	3777503	3781448	chr20:3777503-3781448	0	-	3777503	3777503	8553170	5	816,570,157,112,270,	0,917,1692,2160,3675,
#Partially deleted in new
chr20	3777503	3781448	chr20:3777503-3781448	0	-	3777503	3777503	8553170	6	816,124,245,157,112,270,	0,917,1242,1692,2160,3675,
#Partially deleted in new
chr20	3783850	3786690	chr20:3783850-3786690	3	-	3784683	3786483	0	1	2840,	0,
#Partially deleted in new
chr20	3786771	3806121	chr20:3786771-3806121	1	+	3787131	3804961	789624	16	368,128,52,42,37,123,123,135,81,177,96,63,99,134,112,1301,	0,10850,11640,13516,13690,13971,14199,14482,14950,15152,15509,16138,16336,16632,17797,18049,
#Partially deleted in new
chr20	3786771	3806121	chr20:3786771-3806121	1	+	3787131	3804961	789624	15	368,128,52,42,37,123,123,135,177,96,63,99,134,112,1301,	0,10850,11640,13516,13690,13971,14199,14482,15152,15509,16138,16336,16632,17797,18049,
#Partially deleted in new
chr20	3795738	3805237	chr20:3795738-3805237	0	+	3795738	3795738	789624	16	141,128,52,42,37,123,123,135,81,177,96,63,99,134,112,417,	0,1883,2673,4549,4723,5004,5232,5515,5983,6185,6542,7171,7369,7665,8830,9082,
#Partially deleted in new
chr20	3795834	3806118	chr20:3795834-3806118	3	+	3796531	3804961	0	16	897,128,52,42,37,123,123,135,81,177,96,63,99,134,112,1298,	0,1787,2577,4453,4627,4908,5136,5419,5887,6089,6446,7075,7273,7569,8734,8986,
#Partially deleted in new
chr20	3796290	3806115	chr20:3796290-3806115	1	+	3796531	3804961	0	16	441,86,52,42,37,123,123,135,81,177,96,63,99,134,112,1295,	0,1373,2121,3997,4171,4452,4680,4963,5431,5633,5990,6619,6817,7113,8278,8530,
#Partially deleted in new
chr20	3796430	3805218	chr20:3796430-3805218	1	+	3796531	3804961	0	15	301,128,52,42,37,123,135,81,177,96,63,99,134,112,398,	0,1191,1981,3857,4031,4540,4823,5291,5493,5850,6479,6677,6973,8138,8390,
#Deleted in new
chr20	3801070	3803457	chr20:3801070-3803457	0	+	3801070	3801070	8553170	9	23,135,81,177,96,79,63,99,54,	0,183,651,853,1210,1659,1839,2037,2333,
#Deleted in new
chr20	3801651	3803175	chr20:3801651-3803175	0	+	3801651	3801651	8553170	6	151,177,96,79,63,68,	0,272,629,1078,1258,1456,
#Deleted in new
chr20	3802768	3803433	chr20:3802768-3803433	0	+	3802768	3802768	8553170	3	204,99,30,	0,339,635,
#Partially deleted in new
chr20	3811383	3823882	chr20:3811383-3823882	3	+	3811383	3811383	8553170	3	358,192,12,	0,10718,12487,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	3820523	3825307	chr20:3820523-3825307	1	+	3822117	3824297	789624	3	331,192,1437,	0,1578,3347,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	3820530	3825302	chr20:3820530-3825302	1	+	3822117	3823878	789624	3	228,192,1428,	0,1571,3344,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	3820535	3825302	chr20:3820535-3825302	1	+	3822117	3824297	789624	3	167,192,1432,	0,1566,3335,
#Partially deleted in new
chr20	3820546	3823954	chr20:3820546-3823954	0	+	3822117	3823954	789624	3	308,192,84,	0,1555,3324,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	3820555	3828837	chr20:3820555-3828837	3	+	3822117	3824297	789624	3	203,192,4967,	0,1546,3315,
#Duplicated in new
chr20	3846798	3876123	chr20:3846798-3876123	1	+	3861462	3866147	0	6	105,184,173,160,533,10441,	0,7759,14533,15455,17457,18884,
#Duplicated in new
chr20	3846842	3876110	chr20:3846842-3876110	3	+	3854624	3866147	0	7	61,184,175,173,160,533,10428,	0,7715,10792,14489,15411,17413,18840,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	3888238	3888868	chr20:3888238-3888868	3	-	3888238	3888238	8553170	2	311,130,	0,500,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	3888838	3926958	chr20:3888838-3926958	1	+	3908170	3923294	0	7	66,353,254,177,124,126,3715,	0,19087,21738,23619,28088,29832,34405,
#Partially deleted in new
chr20	3888933	3918789	chr20:3888933-3918789	0	+	3912530	3918789	789624	6	83,210,254,177,124,119,	0,18992,21643,23524,27993,29737,
#Partially deleted in new
chr20	3889094	3923855	chr20:3889094-3923855	3	+	3889100	3923294	0	7	634,353,254,177,124,126,612,	0,18831,21482,23363,27832,29576,34149,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	3889386	3926899	chr20:3889386-3926899	0	+	3889469	3891410	789624	9	342,168,70,210,254,177,124,126,3656,	0,1857,12161,18539,21190,23071,27540,29284,33857,
#Partially deleted in new
chr20	3889388	3923855	chr20:3889388-3923855	0	+	3889469	3910584	789624	7	340,210,254,177,124,126,612,	0,18537,21188,23069,27538,29282,33855,
#Partially deleted in new
chr20	3889414	3923702	chr20:3889414-3923702	1	+	3889469	3923294	0	7	314,353,254,177,124,126,459,	0,18511,21162,23043,27512,29256,33829,
#Partially deleted in new
chr20	3889669	3923631	chr20:3889669-3923631	0	+	3889669	3923294	789624	8	59,66,353,254,177,124,126,388,	0,11882,18256,20907,22788,27257,29001,33574,
#Partially deleted in new
chr20	3889815	3923855	chr20:3889815-3923855	1	+	3908170	3923294	0	7	117,353,254,177,124,126,612,	0,18110,20761,22642,27111,28855,33428,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	3891239	3910816	chr20:3891239-3910816	0	+	3891239	3891239	8553170	3	172,210,240,	0,16686,19337,
#Partially deleted in new
chr20	3908689	3917050	chr20:3908689-3917050	0	+	3908689	3908689	8553170	4	216,254,177,124,	0,1887,3768,8237,
#Deleted in new
chr20	3917493	3917571	chr20:3917493-3917571	3	+	3917493	3917493	5263520	1	78,	0,
#Deleted in new
chr20	3917501	3917563	chr20:3917501-3917563	3	-	3917501	3917501	5263520	1	62,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	3921278	3923400	chr20:3921278-3923400	3	-	3921278	3921278	8553170	2	591,78,	0,2044,
#Partially deleted in new
chr20	3924817	3929873	chr20:3924817-3929873	0	+	3924817	3924817	8553170	2	64,200,	0,4856,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	3927308	4015389	chr20:3927308-4015389	3	-	3934062	3964017	0	6	6893,80,42,43,150,245,	0,7685,17868,20928,36566,87836,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	3929221	3929882	chr20:3929221-3929882	0	+	3929221	3929221	8553170	1	661,	0,
#Partially deleted in new
chr20	3931420	4015582	chr20:3931420-4015582	1	-	3934062	3964017	0	6	2781,80,42,43,150,146,	0,3573,13756,16816,32454,84016,
#Partially deleted in new
chr20	4023916	4024444	chr20:4023916-4024444	7	+	4023916	4023916	16724991	1	528,	0,
#Deleted in new
chr20	4059632	4060113	chr20:4059632-4060113	7	-	4059632	4059632	16724991	1	481,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	4070151	4075165	chr20:4070151-4075165	3	-	4070151	4070151	8553170	3	123,144,419,	0,2369,4595,
#Partially deleted in new
chr20	4120979	4175104	chr20:4120979-4175104	0	+	4120979	4120979	8553170	2	205,75,	0,54050,
#Partially deleted in new
chr20	4148778	4187747	chr20:4148778-4187747	1	+	4175055	4187407	789624	9	199,234,227,174,235,366,161,90,478,	0,26251,28572,33024,33310,33704,34715,37964,38491,
#Partially deleted in new
chr20	4148778	4187747	chr20:4148778-4187747	3	+	4175055	4187407	789624	7	199,234,227,174,760,161,478,	0,26251,28572,33024,33310,34715,38491,
#Partially deleted in new
chr20	4148778	4187747	chr20:4148778-4187747	1	+	4175055	4187407	789624	8	199,234,227,174,235,366,161,478,	0,26251,28572,33024,33310,33704,34715,38491,
#Partially deleted in new
chr20	4148778	4187746	chr20:4148778-4187746	1	+	4175055	4187407	789624	8	199,234,227,174,760,161,90,477,	0,26251,28572,33024,33310,34715,37964,38491,
#Partially deleted in new
chr20	4148934	4187747	chr20:4148934-4187747	1	+	4175055	4187407	789624	4	43,234,227,478,	0,26095,28416,38335,
#Partially deleted in new
chr20	4171709	4187747	chr20:4171709-4187747	1	+	4175055	4187407	789624	7	196,234,227,174,760,161,478,	0,3320,5641,10093,10379,11784,15560,
#Partially deleted in new
chr20	4177571	4187747	chr20:4177571-4187747	0	+	4177571	4187407	789624	6	6,174,760,161,90,478,	0,4231,4517,5922,9171,9698,
#Partially deleted in new
chr20	4181893	4187747	chr20:4181893-4187747	0	+	4181893	4181893	8553170	4	83,161,90,478,	0,1600,4849,5376,
#Partially deleted in new
chr20	4183208	4187747	chr20:4183208-4187747	0	+	4183208	4183208	8553170	3	63,161,478,	0,285,4061,
#Deleted in new
chr20	4183258	4183654	chr20:4183258-4183654	0	+	4183258	4183258	8553170	2	54,161,	0,235,
#Deleted in new
chr20	4193064	4195943	chr20:4193064-4195943	3	+	4193064	4193064	789624	3	182,97,418,	0,2217,2461,
#Partially deleted in new
chr20	4220630	4249074	chr20:4220630-4249074	3	-	4221522	4248957	789624	2	1500,1228,	0,27216,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	4221680	4222381	chr20:4221680-4222381	0	-	4221680	4221680	8553170	2	450,62,	0,639,
#Deleted in new
chr20	4431160	4431673	chr20:4431160-4431673	3	-	4431160	4431160	8553170	2	337,71,	0,442,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	4475637	4525200	chr20:4475637-4525200	3	+	4475637	4475637	8553170	2	41,127,	0,49436,
#Deleted in new
chr20	4590992	4591300	chr20:4590992-4591300	7	-	4590992	4590992	16724991	1	308,	0,
#Partially deleted in new
chr20	4629426	4630219	chr20:4629426-4630219	7	-	4629426	4629426	16724991	1	793,	0,
#Partially deleted in new
chr20	4686235	4701590	chr20:4686235-4701590	3	+	4699220	4699982	0	2	277,2380,	0,12975,
#Partially deleted in new
chr20	4686349	4701590	chr20:4686349-4701590	1	+	4699220	4699982	0	2	159,2380,	0,12861,
#Partially deleted in new
chr20	4686458	4699967	chr20:4686458-4699967	0	+	4699220	4699967	789624	2	54,752,	0,12757,
#Partially deleted in new
chr20	4686542	4699871	chr20:4686542-4699871	0	+	4699220	4699871	789624	2	194,661,	0,12668,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	4721909	4728460	chr20:4721909-4728460	3	+	4724551	4725082	0	2	60,3920,	0,2631,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	4731281	4740668	chr20:4731281-4740668	1	-	4731281	4731281	789624	2	1804,529,	0,8858,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	4731281	4740668	chr20:4731281-4740668	0	-	4731281	4731281	789624	2	1804,69,	0,9318,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	4731281	4740668	chr20:4731281-4740668	2	-	4731281	4731281	789624	2	1804,292,	0,9095,
#Partially deleted in new
chr20	4735668	4736673	chr20:4735668-4736673	7	-	4735668	4735668	16724991	2	618,69,	0,936,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	4761299	4761696	chr20:4761299-4761696	3	+	4761299	4761299	8553170	1	397,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	4780022	4823645	chr20:4780022-4823645	3	-	4784272	4801030	789624	12	4320,98,122,52,102,161,89,152,76,91,75,89,	0,6208,7610,8194,9573,10428,12516,15792,17987,20949,42306,43534,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	4780022	4795504	chr20:4780022-4795504	0	-	4780022	4780022	8553170	9	4320,98,69,52,102,161,89,61,249,	0,6208,7610,8194,9573,10428,12516,12971,15233,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	4780025	4815123	chr20:4780025-4815123	1	-	4784272	4801030	789624	11	4317,98,122,52,102,161,89,152,76,91,22,	0,6205,7607,8191,9570,10425,12513,15789,17984,20946,35076,
#Partially deleted in new
chr20	4852355	5001499	chr20:4852355-5001499	1	-	4856971	4932562	789624	17	4849,96,138,130,106,148,157,121,182,71,89,158,117,99,262,127,94,	0,6933,9592,10422,15414,17550,21580,22220,31286,32397,33465,47199,50086,60524,80099,118437,149050,
#Partially deleted in new
chr20	4859366	4899647	chr20:4859366-4899647	0	-	4859366	4899647	789624	8	18,138,130,106,148,157,121,93,	0,2581,3411,8403,10539,14569,15209,40188,
#Deleted in new
chr20	4868983	4869118	chr20:4868983-4869118	3	+	4868983	4868983	8553170	1	135,	0,
#Partially deleted in new
chr20	4873876	4885991	chr20:4873876-4885991	0	-	4873876	4873876	8553170	5	216,121,182,71,171,	0,699,9765,10876,11944,
#Partially deleted in new
chr20	5013519	5013724	chr20:5013519-5013724	7	-	5013519	5013519	16724991	1	205,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	5045760	5046276	chr20:5045760-5046276	3	-	5045760	5045760	8553170	1	516,	0,
#Deleted in new
chr20	5049856	5050321	chr20:5049856-5050321	3	-	5049856	5049856	8553170	1	465,	0,
#Partially deleted in new
chr20	5061036	5061340	chr20:5061036-5061340	3	-	5061036	5061036	8553170	1	304,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	5066081	5068154	chr20:5066081-5068154	3	-	5066081	5066081	8553170	3	260,161,188,	0,1127,1885,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	5068231	5112790	chr20:5068231-5112790	1	-	5069187	5109430	789624	6	28,163,123,114,118,48,	0,955,37956,41100,42825,44511,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	5068482	5113087	chr20:5068482-5113087	1	-	5069187	5109430	789624	4	867,123,114,127,	0,37705,40849,44478,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	5098386	5098476	chr20:5098386-5098476	7	-	5098386	5098386	16724991	1	90,	0,
#Partially deleted in new
chr20	5099839	5113103	chr20:5099839-5113103	3	-	5100790	5109430	789624	4	1092,123,114,143,	0,6348,9492,13121,
#Partially deleted in new
chr20	5099839	5112904	chr20:5099839-5112904	1	-	5100790	5109430	789624	5	1092,123,114,45,162,	0,6348,9492,11924,12903,
#Partially deleted in new
chr20	5099839	5113049	chr20:5099839-5113049	1	-	5100790	5109430	789624	4	1092,123,114,307,	0,6348,9492,12903,
#Partially deleted in new
chr20	5099839	5113050	chr20:5099839-5113050	1	-	5100790	5109430	789624	4	1092,123,114,331,	0,6348,9492,12880,
#Partially deleted in new
chr20	5099839	5113042	chr20:5099839-5113042	0	-	5100790	5109430	789624	4	1092,123,114,313,	0,6348,9492,12890,
#Partially deleted in new
chr20	5099839	5112969	chr20:5099839-5112969	0	-	5099839	5099839	8553170	4	1092,123,288,227,	0,6348,9318,12903,
#Partially deleted in new
chr20	5106187	5112753	chr20:5106187-5112753	0	-	5106187	5109430	789624	4	123,114,45,24,	0,3144,5576,6542,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	5113992	5114083	chr20:5113992-5114083	3	-	5113992	5113992	8553170	1	91,	0,
#Partially deleted in new
chr20	5114952	5120026	chr20:5114952-5120026	1	-	5115282	5119798	0	6	410,124,195,68,98,449,	0,496,2517,3657,3816,4625,
#Partially deleted in new
chr20	5114952	5126626	chr20:5114952-5126626	3	-	5115282	5119798	0	7	410,124,195,68,98,337,127,	0,496,2517,3657,3816,4625,11547,
#Deleted in new
chr20	5121416	5121539	chr20:5121416-5121539	3	-	5121416	5121416	8553170	1	123,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	5126785	5197887	chr20:5126785-5197887	3	+	5127092	5190234	789624	13	364,137,97,98,140,59,83,88,69,153,120,104,7786,	0,46737,48397,49862,52031,55601,56275,58072,58972,59901,62281,62949,63316,
#Partially deleted in new
chr20	5126878	5183178	chr20:5126878-5183178	0	+	5126878	5126878	8553170	6	271,97,98,140,59,118,	0,48304,49769,51938,55508,56182,
#Partially deleted in new
chr20	5126926	5186774	chr20:5126926-5186774	0	+	5127120	5186774	789624	9	223,97,98,140,59,83,88,69,88,	0,48256,49721,51890,55460,56134,57931,58831,59760,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	5127008	5187879	chr20:5127008-5187879	0	+	5127008	5127008	8553170	11	141,601,137,97,98,140,59,83,88,69,1193,	0,1141,46514,48174,49639,51808,55378,56052,57849,58749,59678,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	5127047	5175652	chr20:5127047-5175652	0	+	5127047	5127047	8553170	3	102,137,470,	0,46475,48135,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	5176101	5191354	chr20:5176101-5191354	0	+	5176101	5176101	8553170	10	644,140,59,83,88,69,153,120,104,1253,	0,2715,6285,6959,8756,9656,10585,12965,13633,14000,
#Partially deleted in new
chr20	5292387	5292831	chr20:5292387-5292831	7	-	5292387	5292387	16724991	1	444,	0,
#Partially deleted in new
chr20	5302039	5314369	chr20:5302039-5314369	3	-	5302039	5314369	789624	2	697,458,	0,11872,
#Partially deleted in new
chr20	5346005	5346160	chr20:5346005-5346160	7	-	5346005	5346005	16724991	1	155,	0,
#Partially deleted in new
chr20	5407563	5407876	chr20:5407563-5407876	3	+	5407563	5407563	8553170	1	313,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	5426894	5432489	chr20:5426894-5432489	0	-	5426894	5426894	8553170	4	322,56,98,39,	0,1588,1734,5556,
#Partially deleted in new
chr20	5431949	5432489	chr20:5431949-5432489	0	-	5431949	5431949	8553170	1	540,	0,
#Partially deleted in new
chr20	5431991	5432603	chr20:5431991-5432603	0	-	5431991	5431991	8553170	2	381,61,	0,551,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	5431991	5445686	chr20:5431991-5445686	1	-	5431991	5431991	789624	5	647,304,234,174,183,	0,1797,2180,5108,13512,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	5433872	5445746	chr20:5433872-5445746	0	-	5433872	5433872	8553170	3	198,234,243,	0,299,11631,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	5434284	5445740	chr20:5434284-5445740	0	-	5434284	5434284	8553170	4	121,174,106,237,	0,2815,3925,11219,
#Partially deleted in new
chr20	5471206	5475182	chr20:5471206-5475182	3	+	5471206	5471206	789624	2	287,1549,	0,2427,
#Partially deleted in new
chr20	5472706	5473975	chr20:5472706-5473975	0	+	5472706	5472706	8553170	2	128,342,	0,927,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	5496066	5504613	chr20:5496066-5504613	1	-	5496066	5496066	789624	2	5797,316,	0,8231,
#Partially deleted in new
chr20	5499115	5502881	chr20:5499115-5502881	3	+	5499115	5499115	8553170	2	60,335,	0,3431,
#Partially deleted in new
chr20	5507874	5510002	chr20:5507874-5510002	3	-	5507874	5507874	789624	3	163,68,127,	0,386,2001,
#Partially deleted in new
chr20	5532877	5533335	chr20:5532877-5533335	7	+	5532877	5532877	16724991	1	458,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	5533627	5535889	chr20:5533627-5535889	3	+	5533627	5533627	8553170	3	67,124,282,	0,1636,1980,
#Partially deleted in new
chr20	5544403	5611026	chr20:5544403-5611026	3	-	5547660	5604412	0	20	3447,161,136,137,66,62,40,78,93,55,133,163,232,124,42,76,85,97,77,185,	0,13541,14280,15536,17061,20613,22329,23079,25743,29511,31009,31412,33976,35604,39877,41790,48923,54321,59960,66438,
#Partially deleted in new
chr20	5544438	5575508	chr20:5544438-5575508	0	-	5547660	5575508	789624	7	3412,161,136,62,93,55,96,	0,13506,14245,20578,25708,29476,30974,
#Partially deleted in new
chr20	5544438	5586037	chr20:5544438-5586037	0	-	5544438	5544438	8553170	15	3412,161,136,137,66,62,40,78,93,55,133,163,232,124,1757,	0,13506,14245,15501,17026,20578,22294,23044,25708,29476,30974,31377,33941,35569,39842,
#Deleted in new
chr20	5547340	5548381	chr20:5547340-5548381	0	-	5547340	5547340	8553170	2	510,123,	0,918,
#Deleted in new
chr20	5548839	5549481	chr20:5548839-5549481	7	+	5548839	5548839	16724991	1	642,	0,
#Partially deleted in new
chr20	5558810	5573954	chr20:5558810-5573954	0	-	5567552	5573954	789624	9	9,137,66,62,40,78,46,93,40,	0,1129,2654,6206,7922,8672,8986,11336,15104,
#Partially deleted in new
chr20	5567520	5574123	chr20:5567520-5574123	0	-	5567520	5567520	8553170	3	40,93,209,	0,2626,6394,
#Partially deleted in new
chr20	5575899	5610924	chr20:5575899-5610924	0	-	5580098	5604412	789624	8	79,232,124,42,85,97,77,83,	0,2480,4108,8381,17427,22825,28464,34942,
#Partially deleted in new
chr20	5750392	5773447	chr20:5750392-5773447	1	+	5772865	5773142	789624	3	87,182,316,	0,22469,22739,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	5750396	5863912	chr20:5750396-5863912	3	+	5772865	5863463	789624	3	83,182,889,	0,22465,112627,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	5750452	5863304	chr20:5750452-5863304	0	+	5756711	5863304	789624	4	27,137,182,281,	0,6259,22409,112571,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	5890054	5890212	chr20:5890054-5890212	3	+	5890054	5890054	8553170	1	158,	0,
#Partially deleted in new
chr20	5911429	5925361	chr20:5911429-5925361	3	+	5911633	5925049	789624	5	253,47,94,1766,390,	0,4896,5396,10905,13542,
#Partially deleted in new
chr20	5911529	5923073	chr20:5911529-5923073	0	+	5916336	5923073	789624	5	153,96,47,94,739,	0,3088,4796,5296,10805,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	5915497	5917980	chr20:5915497-5917980	0	+	5915497	5915497	8553170	2	875,1155,	0,1328,
#Partially deleted in new
chr20	5928084	5929318	chr20:5928084-5929318	7	-	5928084	5928084	16724991	1	1234,	0,
#Partially deleted in new
chr20	5937234	5950515	chr20:5937234-5950515	0	-	5937234	5937234	8553170	11	1492,87,103,86,359,125,205,92,110,128,238,	0,3818,4008,4716,5193,6324,6592,6927,7570,9171,13043,
#Partially deleted in new
chr20	5937832	5950536	chr20:5937832-5950536	3	-	5938534	5950405	0	11	894,87,103,86,359,125,84,92,110,128,259,	0,3220,3410,4118,4595,5726,6115,6329,6972,8573,12445,
#Partially deleted in new
chr20	5937832	5950558	chr20:5937832-5950558	1	-	5938534	5943979	0	10	894,87,103,86,359,125,84,92,128,281,	0,3220,3410,4118,4595,5726,6115,6329,8573,12445,
#Partially deleted in new
chr20	5937832	5950477	chr20:5937832-5950477	0	-	5937832	5937832	8553170	9	894,984,359,125,84,92,110,128,200,	0,3220,4595,5726,6115,6329,6972,8573,12445,
#Partially deleted in new
chr20	5942674	5950514	chr20:5942674-5950514	0	-	5942674	5942674	8553170	6	112,125,84,92,128,237,	0,884,1273,1487,3731,7603,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr20	5950651	5995206	chr20:5950651-5995206	1	+	5952015	5994391	789624	18	372,153,105,83,150,104,199,86,152,196,31,142,196,220,210,77,190,908,	0,1359,1772,3956,4450,6474,7876,12622,16784,17178,21355,27224,32318,34129,35270,36630,42854,43647,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr20	5950651	5995206	chr20:5950651-5995206	1	+	5952015	5994391	789624	19	372,153,105,83,150,104,199,86,152,196,151,141,142,196,220,210,77,190,908,	0,1359,1772,3956,4450,6474,7876,12622,16784,17178,21924,22404,27224,32318,34129,35270,36630,42854,43647,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr20	5950651	5995206	chr20:5950651-5995206	1	+	5952015	5994391	789624	19	426,153,105,83,150,104,199,86,152,196,31,141,142,196,220,210,77,190,908,	0,1359,1772,3956,4450,6474,7876,12622,16784,17178,21355,22404,27224,32318,34129,35270,36630,42854,43647,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr20	5950651	5998977	chr20:5950651-5998977	3	+	5952015	5994391	789624	19	372,153,105,83,150,104,199,86,152,196,31,141,142,196,220,210,77,190,4679,	0,1359,1772,3956,4450,6474,7876,12622,16784,17178,21355,22404,27224,32318,34129,35270,36630,42854,43647,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr20	5950930	5995206	chr20:5950930-5995206	1	+	5952015	5994391	789624	19	147,153,105,83,150,104,199,86,152,148,31,141,142,196,220,210,77,190,908,	0,1080,1493,3677,4171,6195,7597,12343,16505,16947,21076,22125,26945,32039,33850,34991,36351,42575,43368,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	5964537	5964650	chr20:5964537-5964650	3	+	5964537	5964537	8553170	1	113,	0,
#Deleted in new
chr20	5965179	5965511	chr20:5965179-5965511	7	+	5965179	5965179	16724991	1	332,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	5990942	6005821	chr20:5990942-6005821	3	-	5990942	5990942	789624	5	526,131,155,122,49,	0,2851,9578,10333,14830,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	6000417	6000941	chr20:6000417-6000941	3	+	6000417	6000417	8553170	1	524,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	6001732	6002030	chr20:6001732-6002030	3	+	6001732	6001732	8553170	1	298,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	6006089	6040053	chr20:6006089-6040053	3	+	6006246	6037158	789624	7	463,138,130,86,69,92,2980,	0,3685,9271,25195,25922,28374,30984,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	6006092	6040043	chr20:6006092-6040043	1	+	6006246	6032055	789624	6	460,138,130,69,92,2970,	0,3682,9268,25919,28371,30981,
#Partially deleted in new
chr20	6007251	6037393	chr20:6007251-6037393	1	+	6007401	6037158	789624	7	159,138,130,86,69,92,320,	0,2523,8109,24033,24760,27212,29822,
#Partially deleted in new
chr20	6007255	6016055	chr20:6007255-6016055	0	+	6007255	6007255	8553170	3	144,138,695,	0,2519,8105,
#Partially deleted in new
chr20	6028270	6034555	chr20:6028270-6034555	0	+	6028270	6028270	8553170	4	455,86,69,92,	0,3014,3741,6193,
#Partially deleted in new
chr20	6031162	6037391	chr20:6031162-6037391	0	+	6031162	6031162	8553170	4	208,69,92,318,	0,849,3301,5911,
#Partially deleted in new
chr20	6040777	6054049	chr20:6040777-6054049	3	-	6041021	6052799	789624	5	1469,138,205,660,220,	0,3765,10001,11367,13052,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	6065965	6067897	chr20:6065965-6067897	3	-	6065965	6065965	8553170	1	1932,	0,
#Partially deleted in new
chr20	6074844	6123544	chr20:6074844-6123544	3	-	6077172	6119554	789624	15	2502,142,125,222,107,125,50,132,108,103,214,147,234,169,771,	0,4591,9195,10221,12932,14120,20094,22057,22679,32687,35453,37632,40966,44559,47929,
#Partially deleted in new
chr20	6074844	6094172	chr20:6074844-6094172	0	-	6074844	6074844	8553170	7	2502,142,125,222,107,125,99,	0,4591,9195,10221,12932,14120,19229,
#Partially deleted in new
chr20	6076021	6123030	chr20:6076021-6123030	1	-	6077172	6107609	789624	14	1325,142,125,222,107,125,50,132,108,103,147,234,152,257,	0,3414,8018,9044,11755,12943,18917,20880,21502,31510,36455,39789,43399,46752,
#Partially deleted in new
chr20	6112568	6120492	chr20:6112568-6120492	0	-	6112568	6119554	789624	4	55,234,169,109,	0,3242,6835,7815,
#Partially deleted in new
chr20	6200988	6202191	chr20:6200988-6202191	7	-	6200988	6200988	16724991	1	1203,	0,
#Deleted in new
chr20	6213698	6215381	chr20:6213698-6215381	7	+	6213698	6213698	16724991	1	1683,	0,
#Deleted in new
chr20	6219198	6219443	chr20:6219198-6219443	7	+	6219198	6219198	16724991	2	84,127,	0,118,
#Deleted in new
chr20	6220329	6220759	chr20:6220329-6220759	7	+	6220329	6220329	16724991	1	430,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	6446722	6528459	chr20:6446722-6528459	3	+	6446722	6446722	789624	3	101,117,1266,	0,26816,80471,
#Deleted in new
chr20	6731257	6736136	chr20:6731257-6736136	3	-	6731257	6731257	8553170	3	486,86,360,	0,3781,4519,
#Partially deleted in new
chr20	6767663	6780280	chr20:6767663-6780280	3	+	6770126	6779089	0	3	1212,353,2036,	0,2456,10581,
#Partially deleted in new
chr20	7069613	7146656	chr20:7069613-7146656	3	+	7069613	7069613	8553170	2	81,300,	0,76743,
#Deleted in new
chr20	7256579	7258214	chr20:7256579-7258214	3	-	7256579	7256579	8553170	2	271,117,	0,1518,
#Partially deleted in new
chr20	7347466	7367632	chr20:7347466-7367632	3	+	7347466	7347466	789624	3	210,185,353,	0,13154,19813,
#Deleted in new
chr20	7371607	7371692	chr20:7371607-7371692	3	+	7371607	7371607	5263520	1	85,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	7633561	7633851	chr20:7633561-7633851	3	-	7633561	7633561	8553170	1	290,	0,
#Deleted in new
chr20	7831797	7832322	chr20:7831797-7832322	7	-	7831797	7831797	16724991	1	525,	0,
#Deleted in new
chr20	7867326	7867614	chr20:7867326-7867614	7	+	7867326	7867326	16724991	1	288,	0,
#Partially deleted in new
chr20	7882980	7940474	chr20:7882980-7940474	3	-	7883592	7940422	0	8	683,70,159,92,176,256,152,189,	0,2540,2725,12152,23173,31183,51503,57305,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	7977347	8019829	chr20:7977347-8019829	3	-	7982250	8019613	789624	8	5274,64,102,46,129,46,116,392,	0,6446,9940,18678,22384,24148,32852,42090,
#Partially deleted in new
chr20	7983793	8019805	chr20:7983793-8019805	0	-	7983793	8019613	789624	6	64,102,46,91,116,368,	0,3494,12232,15938,26406,35644,
#Partially deleted in new
chr20	7987309	8019646	chr20:7987309-8019646	0	-	8018975	8019613	789624	7	80,46,129,46,116,247,209,	0,8716,12422,14186,22890,31483,32128,
#Partially deleted in new
chr20	7987323	8013930	chr20:7987323-8013930	0	-	7987323	7987323	8553170	6	66,46,129,46,116,163,	0,8702,12408,14172,22876,26444,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	8019222	8027725	chr20:8019222-8027725	0	+	8019222	8019222	8553170	4	81,211,116,65,	0,3334,4114,8438,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	8019901	8027956	chr20:8019901-8027956	3	+	8019901	8019901	8553170	7	203,871,97,69,211,182,296,	0,489,2157,2479,2655,3369,7759,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	8022625	8043512	chr20:8022625-8043512	0	+	8022625	8022625	8553170	4	142,116,169,115,	0,711,17558,20772,
#Partially deleted in new
chr20	8077250	8883199	chr20:8077250-8883199	1	+	8628350	8802154	789624	33	54,78,69,138,80,54,76,101,167,147,158,83,85,178,68,97,85,125,155,165,100,105,110,133,54,220,181,77,90,58,87,118,1578,	0,73043,294131,551043,568851,570649,572123,579933,581287,607681,620375,631419,639013,640420,645103,647405,650058,651799,655987,659777,662010,663093,664213,679795,683156,687888,697288,711198,711382,712267,712924,724805,804371,
#Deleted in new
chr20	8097823	8099774	chr20:8097823-8099774	7	-	8097823	8097823	16724991	1	1951,	0,
#Partially deleted in new
chr20	8132137	8884889	chr20:8132137-8884889	1	+	8132651	8802154	789624	33	613,78,69,138,80,54,76,101,167,147,158,83,85,178,68,97,85,125,155,165,100,105,110,133,54,220,181,77,90,58,87,118,3268,	0,18156,239244,496156,513964,515762,517236,525046,526400,552794,565488,576532,584126,585533,590216,592518,595171,596912,601100,604890,607123,608206,609326,624908,628269,633001,642401,656311,656495,657380,658037,669918,749484,
#Partially deleted in new
chr20	8132264	8884903	chr20:8132264-8884903	3	+	8132651	8881849	789624	32	486,78,69,138,80,54,76,101,167,147,158,83,85,178,68,97,85,125,155,165,100,105,110,133,54,220,181,77,90,58,87,3282,	0,18029,239117,496029,513837,515635,517109,524919,526273,552667,565361,576405,583999,585406,590089,592391,595044,596785,600973,604763,606996,608079,609199,624781,628142,632874,642274,656184,656368,657253,657910,749357,
#Partially deleted in new
chr20	8132269	8653531	chr20:8132269-8653531	1	+	8132651	8651565	789624	8	481,78,69,138,80,54,76,2119,	0,18024,239112,496024,513832,515630,517104,519143,
#Partially deleted in new
chr20	8132314	8729899	chr20:8132314-8729899	0	+	8132651	8649412	789624	18	436,78,69,138,80,54,56,101,167,147,158,83,85,178,68,97,85,850,	0,17979,239067,495979,513787,515585,517079,524869,526223,552617,565311,576355,583949,585356,590039,592341,594994,596735,
#Partially deleted in new
chr20	8132515	8628617	chr20:8132515-8628617	0	+	8132515	8132515	8553170	4	235,78,69,324,	0,17778,238866,495778,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	8132525	8649989	chr20:8132525-8649989	1	+	8132651	8649473	789624	7	225,78,69,138,80,54,616,	0,17768,238856,495768,513576,515374,516848,
#Partially deleted in new
chr20	8132648	8802493	chr20:8132648-8802493	1	+	8132651	8802154	789624	32	102,78,69,138,80,54,76,101,167,147,158,83,85,178,68,97,85,125,155,165,100,105,110,133,54,220,181,77,90,58,87,438,	0,17645,238733,495645,513453,515251,516725,524535,525889,552283,564977,576021,583615,585022,589705,592007,594660,596401,600589,604379,606612,607695,608815,624397,627758,632490,641890,655800,655984,656869,657526,669407,
#Partially deleted in new
chr20	8150299	8372166	chr20:8150299-8372166	0	+	8150299	8150299	8553170	2	72,785,	0,221082,
#Partially deleted in new
chr20	8150324	8371422	chr20:8150324-8371422	0	+	8150324	8371422	789624	2	59,41,	0,221057,
#Deleted in new
chr20	8248703	8249742	chr20:8248703-8249742	1	+	8248703	8248703	789624	2	87,286,	0,753,
#Partially deleted in new
chr20	8248724	8256918	chr20:8248724-8256918	3	+	8248724	8248724	8553170	2	66,185,	0,8009,
#Partially deleted in new
chr20	8305673	8788493	chr20:8305673-8788493	0	+	8305673	8305673	8553170	27	41,69,138,80,54,76,101,167,147,158,83,85,178,68,97,85,125,155,165,100,105,110,133,54,220,181,45,	0,65708,322620,340428,342226,343700,351510,352864,379258,391952,402996,410590,411997,416680,418982,421635,423376,427564,431354,433587,434670,435790,451372,454733,459465,468865,482775,
#Partially deleted in new
chr20	8305685	8788503	chr20:8305685-8788503	0	+	8305685	8305685	8553170	27	248,69,138,80,54,76,101,167,147,158,83,85,178,68,97,85,125,155,165,100,105,110,133,54,220,181,55,	0,65696,322608,340416,342214,343688,351498,352852,379246,391940,402984,410578,411985,416668,418970,421623,423364,427552,431342,433575,434658,435778,451360,454721,459453,468853,482763,
#Partially deleted in new
chr20	8306365	8628312	chr20:8306365-8628312	0	+	8306365	8306365	8553170	3	12,69,19,	0,65016,321928,
#Partially deleted in new
chr20	8371079	8647908	chr20:8371079-8647908	0	+	8371079	8371079	8553170	4	371,138,80,9,	0,257214,275022,276820,
#Partially deleted in new
chr20	8623875	8628347	chr20:8623875-8628347	0	+	8623875	8623875	8553170	2	46,54,	0,4418,
#Partially deleted in new
chr20	8625262	8628361	chr20:8625262-8628361	0	+	8625262	8625262	8553170	2	50,68,	0,3031,
#Partially deleted in new
chr20	8628287	8884896	chr20:8628287-8884896	1	+	8628287	8802154	789624	30	144,80,54,76,101,167,147,158,83,85,178,68,97,85,125,155,165,100,105,110,133,54,220,181,77,90,58,87,118,3275,	0,17814,19612,21086,28896,30250,56644,69338,80382,87976,89383,94066,96368,99021,100762,104950,108740,110973,112056,113176,128758,132119,136851,146251,160161,160345,161230,161887,173768,253334,
#Partially deleted in new
chr20	8628287	8884896	chr20:8628287-8884896	1	+	8628287	8881849	789624	29	144,80,54,76,101,167,147,158,83,85,178,68,97,85,125,155,165,100,105,110,133,54,220,181,77,90,58,87,3275,	0,17814,19612,21086,28896,30250,56644,69338,80382,87976,89383,94066,96368,99021,100762,104950,108740,110973,112056,113176,128758,132119,136851,146251,160161,160345,161230,161887,253334,
#Partially deleted in new
chr20	8649390	8652011	chr20:8649390-8652011	0	+	8649390	8651648	789624	2	59,384,	0,2237,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr20	8658620	8968360	chr20:8658620-8968360	0	+	8658620	8802154	789624	27	84,147,158,83,85,178,68,97,85,125,155,165,100,105,110,133,54,220,181,77,90,58,87,118,815,62,1141,	0,26311,39005,50049,57643,59050,63733,66035,68688,70429,74617,78407,80640,81723,82843,98425,101786,106518,115918,129828,130012,130897,131554,143435,303575,306469,308599,
#Partially deleted in new
chr20	8715861	8788523	chr20:8715861-8788523	0	+	8715861	8715861	8553170	16	487,178,68,97,85,125,155,165,100,105,110,133,54,220,181,75,	0,1809,6492,8794,11447,13188,17376,21166,23399,24482,25602,41184,44545,49277,58677,72587,
#Deleted in new
chr20	8732106	8733273	chr20:8732106-8733273	0	+	8732106	8732106	8553170	2	64,36,	0,1131,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	8737027	8752348	chr20:8737027-8752348	0	+	8737027	8750914	789624	6	165,100,105,110,112,1227,	0,2233,3316,4436,13776,14094,
#Partially deleted in new
chr20	8765168	8792771	chr20:8765168-8792771	0	+	8765168	8792636	789624	7	190,181,77,90,58,87,147,	0,9370,23280,23464,24349,25006,27456,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	8765259	8968319	chr20:8765259-8968319	0	+	8765259	8962201	789624	10	99,181,77,90,58,87,141,118,340,1100,	0,9279,23189,23373,24258,24915,196936,197633,199836,201960,
#Deleted in new
chr20	8789545	8792790	chr20:8789545-8792790	0	+	8789545	8792595	789624	3	30,87,204,	0,629,3041,
#Deleted in new
chr20	8790195	8792140	chr20:8790195-8792140	0	+	8790195	8792123	789624	2	66,56,	0,1889,
#Partially deleted in new
chr20	8790221	8884903	chr20:8790221-8884903	0	+	8790221	8881849	789624	2	40,3276,	0,91406,
#Deleted in new
chr20	8929894	8930038	chr20:8929894-8930038	7	-	8929894	8929894	16724991	1	144,	0,
#Deleted in new
chr20	8934983	8935481	chr20:8934983-8935481	7	-	8934983	8934983	16724991	1	498,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	8962307	8968278	chr20:8962307-8968278	0	+	8962307	8962307	8553170	4	29,525,56,1059,	0,178,2788,4912,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	8998848	8999100	chr20:8998848-8999100	3	+	8998848	8998848	8553170	1	252,	0,
#Partially deleted in new
chr20	9068762	9339007	chr20:9068762-9339007	0	+	9307814	9339007	789624	7	141,56,63,99,81,60,114,	0,27524,148627,239037,268363,269245,270131,
#Partially deleted in new
chr20	9068806	9338998	chr20:9068806-9338998	0	+	9307814	9338998	789624	6	97,63,99,81,60,105,	0,148583,238993,268319,269201,270087,
#Partially deleted in new
chr20	9069053	9480813	chr20:9069053-9480813	1	+	9307814	9478989	789624	38	153,63,99,81,60,144,80,54,82,101,58,109,211,94,80,85,91,96,101,36,142,85,125,52,103,165,205,89,151,50,66,116,76,176,102,58,87,1893,	0,148336,238746,268072,268954,269840,293842,296407,302160,303249,303993,311000,315147,318409,320825,321477,324534,326469,332436,336259,338863,339579,340003,341983,350753,352243,354694,366506,367948,374927,375124,384293,388360,390581,399517,403736,404225,409867,
#Partially deleted in new
chr20	9069100	9338912	chr20:9069100-9338912	0	+	9307814	9338912	789624	7	106,56,63,99,81,60,19,	0,27186,148289,238699,268025,268907,269793,
#Partially deleted in new
chr20	9166357	9338021	chr20:9166357-9338021	0	+	9307814	9338021	789624	5	338,63,99,81,14,	0,51032,141442,170768,171650,
#Partially deleted in new
chr20	9217389	9480813	chr20:9217389-9480813	1	+	9307814	9478989	789624	36	63,99,81,60,144,80,54,82,101,58,109,211,94,80,85,91,96,101,142,85,125,52,103,165,205,89,151,50,66,116,76,176,102,58,87,1893,	0,90410,119736,120618,121504,145506,148071,153824,154913,155657,162664,166811,170073,172489,173141,176198,178133,184100,190527,191243,191667,193647,202417,203907,206358,218170,219612,226591,226788,235957,240024,242245,251181,255400,255889,261531,
#Partially deleted in new
chr20	9307799	9481242	chr20:9307799-9481242	1	+	9307814	9478989	789624	35	99,81,60,144,80,54,82,101,58,109,211,94,80,85,91,96,101,142,85,125,52,103,165,205,89,151,50,66,116,76,176,102,58,87,2322,	0,29326,30208,31094,55096,57661,63414,64503,65247,72254,76401,79663,82079,82731,85788,87723,93690,100117,100833,101257,103237,112007,113497,115948,127760,129202,136181,136378,145547,149614,151835,160771,164990,165479,171121,
#Partially deleted in new
chr20	9307799	9481242	chr20:9307799-9481242	3	+	9307814	9479009	789624	36	99,81,60,144,80,54,82,101,58,109,211,94,80,85,91,96,101,142,85,125,52,103,165,205,89,151,50,66,116,76,176,102,58,87,37,2322,	0,29326,30208,31094,55096,57661,63414,64503,65247,72254,76401,79663,82079,82731,85788,87723,93690,100117,100833,101257,103237,112007,113497,115948,127760,129202,136181,136378,145547,149614,151835,160771,164990,165479,168917,171121,
#Partially deleted in new
chr20	9307799	9479357	chr20:9307799-9479357	1	+	9307814	9478989	789624	36	99,81,60,144,80,54,82,101,58,109,211,94,80,85,91,96,101,36,142,85,125,52,103,165,205,89,151,50,66,116,76,176,102,58,87,437,	0,29326,30208,31094,55096,57661,63414,64503,65247,72254,76401,79663,82079,82731,85788,87723,93690,97513,100117,100833,101257,103237,112007,113497,115948,127760,129202,136181,136378,145547,149614,151835,160771,164990,165479,171121,
#Partially deleted in new
chr20	9307799	9481242	chr20:9307799-9481242	0	+	9307799	9307799	8553170	35	99,81,60,144,80,54,82,101,58,109,211,94,80,85,91,96,101,142,85,125,52,103,165,205,89,151,50,66,116,76,102,58,87,37,2322,	0,29326,30208,31094,55096,57661,63414,64503,65247,72254,76401,79663,82079,82731,85788,87723,93690,100117,100833,101257,103237,112007,113497,115948,127760,129202,136181,136378,145547,149614,160771,164990,165479,168917,171121,
#Partially deleted in new
chr20	9370933	9481242	chr20:9370933-9481242	0	+	9370933	9370933	8553170	29	362,101,58,109,211,94,80,85,91,96,101,142,85,125,52,103,165,205,89,151,50,66,116,76,176,102,58,87,2322,	0,1369,2113,9120,13267,16529,18945,19597,22654,24589,30556,36983,37699,38123,40103,48873,50363,52814,64626,66068,73047,73244,82413,86480,88701,97637,101856,102345,107987,
#Partially deleted in new
chr20	9370961	9481242	chr20:9370961-9481242	0	+	9370961	9370961	8553170	28	334,101,109,211,94,80,85,91,96,101,142,85,125,52,103,165,205,89,151,50,66,116,76,176,102,58,87,2322,	0,1341,9092,13239,16501,18917,19569,22626,24561,30528,36955,37671,38095,40075,48845,50335,52786,64598,66040,73019,73216,82385,86452,88673,97609,101828,102317,107959,
#Partially deleted in new
chr20	9370961	9481242	chr20:9370961-9481242	0	+	9370961	9370961	8553170	29	334,101,109,211,94,80,85,91,96,101,36,142,85,125,52,103,165,205,89,151,50,66,116,76,176,102,58,87,2322,	0,1341,9092,13239,16501,18917,19569,22626,24561,30528,34351,36955,37671,38095,40075,48845,50335,52786,64598,66040,73019,73216,82385,86452,88673,97609,101828,102317,107959,
#Partially deleted in new
chr20	9505179	9514998	chr20:9505179-9514998	3	-	9505179	9505179	789624	5	944,128,335,286,235,	0,1030,1745,3700,9584,
#Partially deleted in new
chr20	9514357	9529923	chr20:9514357-9529923	1	+	9514852	9529820	789624	5	559,173,106,189,282,	0,1095,1898,3682,15284,
#Partially deleted in new
chr20	9514360	9530524	chr20:9514360-9530524	3	+	9514852	9529820	789624	6	556,173,132,106,189,883,	0,1092,1639,1895,3679,15281,
#Partially deleted in new
chr20	9537388	9838867	chr20:9537388-9838867	1	-	9539461	9644328	0	10	2229,135,126,127,134,492,786,215,150,106,	0,5197,6980,20219,25502,28504,42756,106736,173897,301373,
#Partially deleted in new
chr20	9537388	9838831	chr20:9537388-9838831	1	-	9539461	9644328	0	11	2229,135,126,127,134,492,786,215,150,149,70,	0,5197,6980,20219,25502,28504,42756,106736,173897,246969,301373,
#Partially deleted in new
chr20	9537388	9839041	chr20:9537388-9839041	3	-	9539461	9644328	0	11	2229,135,126,127,134,492,786,215,150,106,280,	0,5197,6980,20219,25502,28504,42756,106736,173897,281291,301373,
#Partially deleted in new
chr20	9575607	9577689	chr20:9575607-9577689	3	+	9575607	9575607	8553170	2	135,330,	0,1752,
#Partially deleted in new
chr20	9986087	10007116	chr20:9986087-10007116	3	+	9986087	9986087	789624	2	432,604,	0,20425,
#Partially deleted in new
chr20	9986125	10043216	chr20:9986125-10043216	0	+	9986125	9986125	8553170	2	394,95,	0,56996,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	10023811	10219754	chr20:10023811-10219754	1	-	10023811	10023811	789624	5	2355,105,109,120,518,	0,2732,80474,173006,195425,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	10025615	10035324	chr20:10025615-10035324	0	-	10025615	10025615	8553170	3	551,105,168,	0,928,9541,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	10025916	10026168	chr20:10025916-10026168	3	+	10025916	10025916	8553170	1	252,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	10026074	10368719	chr20:10026074-10368719	0	-	10026074	10026074	8553170	4	574,109,120,5,	0,78211,170743,342640,
#Partially deleted in new
chr20	10035040	10055822	chr20:10035040-10055822	1	+	10038301	10055660	789624	11	293,64,390,200,150,124,823,227,164,138,321,	0,538,3217,8081,9353,10533,14349,16622,18071,19421,20461,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	10035048	10058303	chr20:10035048-10058303	3	+	10038301	10055660	789624	10	285,390,200,150,124,823,227,164,138,2802,	0,3209,8073,9345,10525,14341,16614,18063,19413,20453,
#Partially deleted in new
chr20	10035116	10055827	chr20:10035116-10055827	0	+	10035116	10035116	8553170	11	217,390,46,200,150,124,823,227,164,138,326,	0,3141,5508,8005,9277,10457,14273,16546,17995,19345,20385,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	10074436	10219506	chr20:10074436-10219506	1	-	10074436	10074436	8553170	5	265,40,109,120,270,	0,2437,29849,122381,144800,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	10103726	10219315	chr20:10103726-10219315	1	-	10103726	10103726	8553170	3	668,120,79,	0,93091,115510,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	10104344	10368776	chr20:10104344-10368776	3	-	10104344	10104344	8553170	4	50,120,136,62,	0,92473,127139,264370,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	10104384	10219524	chr20:10104384-10219524	1	-	10104384	10104384	8553170	4	10,120,123,303,	0,92433,94368,114837,
#Partially deleted in new
chr20	10173519	10196990	chr20:10173519-10196990	3	+	10173519	10173519	8553170	2	225,124,	0,23347,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	10180234	10185775	chr20:10180234-10185775	3	+	10180234	10180234	8553170	3	107,132,207,	0,1403,5334,
#Partially deleted in new
chr20	10218829	10307418	chr20:10218829-10307418	3	+	10275491	10306197	0	8	148,135,42,49,118,126,145,1290,	0,56599,58855,65894,74331,78095,80438,87299,
#Partially deleted in new
chr20	10218832	10307418	chr20:10218832-10307418	1	+	10275491	10306197	0	8	145,135,42,49,118,126,145,1290,	0,56596,58852,65891,74049,78092,80435,87296,
#Partially deleted in new
chr20	10219065	10293278	chr20:10219065-10293278	0	+	10275491	10293278	789624	5	148,135,42,49,118,	0,56363,58619,65658,74095,
#Partially deleted in new
chr20	10275518	10278069	chr20:10275518-10278069	0	+	10275518	10275518	8553170	2	45,385,	0,2166,
#Partially deleted in new
chr20	10296229	10307418	chr20:10296229-10307418	0	+	10296229	10296229	8553170	3	821,145,1290,	0,3038,9899,
#Deleted in new
chr20	10334418	10334698	chr20:10334418-10334698	7	+	10334418	10334418	16724991	1	280,	0,
#Partially deleted in new
chr20	10349156	10349628	chr20:10349156-10349628	7	-	10349156	10349156	16724991	1	472,	0,
#Deleted in new
chr20	10385778	10387806	chr20:10385778-10387806	7	+	10385778	10385778	16724991	1	2028,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	10401008	10434222	chr20:10401008-10434222	3	-	10405246	10413514	789624	6	4679,111,176,1402,231,115,	0,6607,7619,11521,19519,33099,
#Partially deleted in new
chr20	10405183	10431922	chr20:10405183-10431922	1	-	10405246	10413514	789624	6	504,111,176,1402,231,239,	0,2432,3444,7346,15344,26500,
#Partially deleted in new
chr20	10413519	10431922	chr20:10413519-10431922	3	-	10413734	10413887	789624	3	412,231,239,	0,7008,18164,
#Deleted in new
chr20	10420545	10420737	chr20:10420545-10420737	3	-	10420545	10420737	789624	1	192,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	10435302	10628034	chr20:10435302-10628034	3	+	10458204	10623379	789624	8	151,56,90,121,78,89,101,5376,	0,22873,120928,125397,163372,166428,186011,187356,
#Partially deleted in new
chr20	10598674	10636829	chr20:10598674-10636829	0	+	10598674	10636364	789624	4	78,89,143,287,	0,3056,37621,37868,
#Deleted in new
chr20	10612860	10614229	chr20:10612860-10614229	7	-	10612860	10612860	16724991	1	1369,	0,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr20	10637683	10673999	chr20:10637683-10673999	3	-	10639497	10673530	0	26	2272,151,132,234,110,114,86,28,117,114,114,114,165,151,174,47,114,114,114,120,131,61,255,52,306,550,	0,3099,3429,3776,4099,4804,6094,6673,7179,7459,7672,8287,9255,10276,10865,11377,11838,12563,13897,14447,14784,18714,20784,26279,35017,35766,
#Partially deleted in new
chr20	10637758	10662506	chr20:10637758-10662506	0	-	10637758	10637758	8553170	25	209,484,151,132,234,110,114,86,28,117,114,114,114,165,151,174,47,114,114,114,120,131,61,255,305,	0,1713,3024,3354,3701,4024,4729,6019,6598,7104,7384,7597,8212,9180,10201,10790,11302,11763,12488,13822,14372,14709,18639,20709,24443,
#Deleted in new
chr20	10639869	10641276	chr20:10639869-10641276	0	-	10639869	10639869	8553170	2	86,494,	0,913,
#Partially deleted in new
chr20	10641579	10652722	chr20:10641579-10652722	0	-	10641579	10641579	8553170	17	114,110,114,86,28,117,114,114,114,165,151,174,47,114,1448,120,255,	0,203,908,2198,2777,3283,3563,3776,4391,5359,6380,6969,7481,7942,8667,10551,10888,
#Deleted in new
chr20	10644442	10646366	chr20:10644442-10646366	0	-	10644442	10644442	8553170	4	537,114,114,396,	0,700,913,1528,
#Partially deleted in new
chr20	10645371	10647312	chr20:10645371-10647312	0	-	10645371	10645371	8553170	3	98,114,374,	0,599,1567,
#Partially deleted in new
chr20	10645721	10648028	chr20:10645721-10648028	0	-	10645800	10648028	789624	3	363,165,69,	0,1217,2238,
#Partially deleted in new
chr20	10647047	10650257	chr20:10647047-10650257	0	-	10648625	10650257	789624	6	56,151,128,47,114,11,	0,912,1501,2013,2474,3199,
#Deleted in new
chr20	10647980	10649588	chr20:10647980-10649588	0	-	10647980	10647980	8553170	3	130,559,67,	0,568,1541,
#Deleted in new
chr20	10649635	10649695	chr20:10649635-10649695	3	-	10649635	10649635	5263520	1	60,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	10672927	10991642	chr20:10672927-10991642	0	+	10672927	10672927	8553170	5	98,54,134,153,45,	0,235898,236228,240080,318670,
#Deleted in new
chr20	10753089	10753966	chr20:10753089-10753966	3	+	10753089	10753089	789624	2	56,382,	0,495,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	10875332	10909272	chr20:10875332-10909272	3	-	10875332	10875332	789624	7	898,50,56,247,386,62,307,	0,2991,18632,19283,20682,21773,33633,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	10888581	10889088	chr20:10888581-10889088	7	-	10888581	10888581	16724991	1	507,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	10902283	10914535	chr20:10902283-10914535	3	+	10902283	10902283	8553170	5	19,54,134,153,132,	0,6542,6872,10724,12120,
#Partially deleted in new
chr20	10986674	10991935	chr20:10986674-10991935	1	+	10986674	10986674	8553170	4	83,68,69,338,	0,789,1430,4923,
#Partially deleted in new
chr20	10986674	10994924	chr20:10986674-10994924	0	+	10986674	10986674	8553170	3	83,338,131,	0,4923,8119,
#Deleted in new
chr20	11001303	11001763	chr20:11001303-11001763	3	+	11001303	11001303	8553170	1	460,	0,
#Partially deleted in new
chr20	11027759	11029366	chr20:11027759-11029366	3	+	11027759	11027759	789624	3	147,123,176,	0,402,1431,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	11234169	11301525	chr20:11234169-11301525	3	-	11234169	11234169	8553170	8	120,133,420,79,50,118,99,86,	0,34580,36089,37035,39164,52492,60466,67270,
#Partially deleted in new
chr20	11266115	11268835	chr20:11266115-11268835	1	-	11266115	11266115	8553170	2	328,86,	0,2634,
#Deleted in new
chr20	11345382	11345855	chr20:11345382-11345855	7	-	11345382	11345382	16724991	1	473,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	11536405	11541647	chr20:11536405-11541647	3	-	11536405	11536405	8553170	3	30,104,161,	0,4055,5081,
#Deleted in new
chr20	11608435	11609048	chr20:11608435-11609048	7	-	11608435	11608435	16724991	1	613,	0,
#Deleted in new
chr20	11621050	11621477	chr20:11621050-11621477	7	+	11621050	11621050	16724991	1	427,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	11685143	11687323	chr20:11685143-11687323	3	-	11685143	11685143	8553170	1	2180,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	11800462	11810426	chr20:11800462-11810426	1	-	11800462	11800462	8553170	2	449,247,	0,9717,
#Partially deleted in new
chr20	11809986	11849611	chr20:11809986-11849611	1	-	11809986	11809986	8553170	2	453,105,	0,39520,
#Partially deleted in new
chr20	11810020	11870715	chr20:11810020-11870715	2	-	11810020	11810020	789624	2	419,71,	0,60624,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	11818820	11819091	chr20:11818820-11819091	3	-	11818820	11818820	8553170	1	271,	0,
#Deleted in new
chr20	11838354	11838574	chr20:11838354-11838574	7	+	11838354	11838354	16724991	1	220,	0,
#Partially deleted in new
chr20	11890722	11926609	chr20:11890722-11926609	3	+	11918458	11923666	789624	5	232,268,91,119,3976,	0,27611,28363,28995,31911,
#Partially deleted in new
chr20	11890816	11926609	chr20:11890816-11926609	1	+	11918458	11923666	789624	6	138,234,268,91,119,3976,	0,26961,27517,28269,28901,31817,
#Partially deleted in new
chr20	11890827	11926609	chr20:11890827-11926609	1	+	11918275	11923666	789624	5	127,824,91,119,3976,	0,26950,28258,28890,31806,
#Partially deleted in new
chr20	11890869	11923010	chr20:11890869-11923010	0	+	11918458	11919727	789624	4	85,268,119,377,	0,27464,28848,31764,
#Partially deleted in new
chr20	11891326	11918463	chr20:11891326-11918463	0	+	11918458	11918463	8553170	3	121,234,130,	0,26451,27007,
#Partially deleted in new
chr20	11892492	11922687	chr20:11892492-11922687	0	+	11918458	11922687	789624	5	51,268,91,119,54,	0,25841,26593,27225,30141,
#Partially deleted in new
chr20	11892492	11926590	chr20:11892492-11926590	1	+	11918458	11923666	789624	5	51,268,91,119,3957,	0,25841,26593,27225,30141,
#Partially deleted in new
chr20	11909403	11918677	chr20:11909403-11918677	3	-	11909403	11909403	8553170	3	1104,363,364,	0,3910,8910,
#Deleted in new
chr20	11917864	11926590	chr20:11917864-11926590	1	+	11918275	11923666	789624	4	737,91,119,3957,	0,1221,1853,4769,
#Deleted in new
chr20	11917864	11926590	chr20:11917864-11926590	1	+	11918458	11923666	789624	5	147,268,91,119,3957,	0,469,1221,1853,4769,
#Deleted in new
chr20	11918809	11922849	chr20:11918809-11922849	0	+	11919092	11922849	789624	4	67,91,119,216,	0,276,908,3824,
#Deleted in new
chr20	11918850	11922729	chr20:11918850-11922729	0	+	11919092	11922729	789624	3	326,119,96,	0,867,3783,
#Deleted in new
chr20	11919276	11923035	chr20:11919276-11923035	0	+	11919276	11919276	8553170	3	147,119,402,	0,441,3357,
#Deleted in new
chr20	11919276	11922985	chr20:11919276-11922985	0	+	11919276	11919276	8553170	3	334,119,352,	0,441,3357,
#Deleted in new
chr20	11919540	11922889	chr20:11919540-11922889	0	+	11919540	11919540	8553170	2	296,256,	0,3093,
#Deleted in new
chr20	11921565	11923130	chr20:11921565-11923130	0	+	11921565	11921565	8553170	2	97,497,	0,1068,
#Deleted in new
chr20	12243894	12244296	chr20:12243894-12244296	3	-	12243894	12243894	8553170	2	152,128,	0,274,
#Partially deleted in new
chr20	12305612	12316485	chr20:12305612-12316485	3	-	12305612	12305612	8553170	2	114,359,	0,10514,
#Deleted in new
chr20	12380055	12381255	chr20:12380055-12381255	7	+	12380055	12380055	16724991	1	1200,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	12934876	12935783	chr20:12934876-12935783	3	-	12934876	12934876	8553170	1	907,	0,
#Deleted in new
chr20	12950337	12951627	chr20:12950337-12951627	3	+	12950337	12950337	789624	2	424,177,	0,1113,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	13008978	13051018	chr20:13008978-13051018	0	+	13008978	13008978	8553170	2	406,2074,	0,39966,
#Partially deleted in new
chr20	13008986	13072371	chr20:13008986-13072371	0	+	13009267	13072371	789624	4	86,184,186,116,	0,214,39958,63269,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	13008993	13169103	chr20:13008993-13169103	3	+	13009267	13164867	789624	12	391,186,155,149,125,94,106,220,127,136,130,4350,	0,39951,63262,65355,82089,84490,101118,108512,117597,145009,151009,155760,
#Partially deleted in new
chr20	13009348	13079867	chr20:13009348-13079867	0	+	13009348	13079867	789624	5	36,186,155,149,119,	0,39596,62907,65000,70400,
#Deleted in new
chr20	13073666	13074312	chr20:13073666-13074312	7	-	13073666	13073666	16724991	1	646,	0,
#Partially deleted in new
chr20	13126645	13164471	chr20:13126645-13164471	0	+	13126645	13164383	789624	4	72,136,130,115,	0,27357,33357,37711,
#Partially deleted in new
chr20	13126654	13133042	chr20:13126654-13133042	0	+	13126654	13126654	8553170	2	63,214,	0,6174,
#Partially deleted in new
chr20	13221770	13300651	chr20:13221770-13300651	3	+	13221776	13299459	789624	6	144,240,265,144,90,1710,	0,48733,57863,66769,70603,77171,
#Deleted in new
chr20	13237800	13239674	chr20:13237800-13239674	3	-	13237800	13237800	789624	3	309,121,222,	0,1183,1652,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	13244063	13245369	chr20:13244063-13245369	3	-	13244063	13244063	8553170	2	318,128,	0,1178,
#Deleted in new
chr20	13368290	13368703	chr20:13368290-13368703	3	-	13368290	13368290	8553170	1	413,	0,
#Partially deleted in new
chr20	13389391	13638940	chr20:13389391-13638940	3	-	13390359	13630078	0	14	1061,74,111,111,79,120,107,80,85,121,69,68,219,47,	0,28056,45652,93835,139041,144630,169616,180115,191505,197858,234054,235793,240542,249502,
#Partially deleted in new
chr20	13389391	13638903	chr20:13389391-13638903	0	-	13389391	13389391	8553170	14	1061,74,111,111,66,120,107,80,85,121,69,68,219,10,	0,28056,45652,93835,139054,144630,169616,180115,191505,197858,234054,235793,240542,249502,
#Deleted in new
chr20	13392676	13393674	chr20:13392676-13393674	7	+	13392676	13392676	16724991	1	998,	0,
#Partially deleted in new
chr20	13435043	13638903	chr20:13435043-13638903	0	-	13435043	13435043	8553170	10	111,111,79,120,85,121,69,68,219,10,	0,48183,93389,98978,145853,152206,188402,190141,194890,203850,
#Partially deleted in new
chr20	13483226	13638903	chr20:13483226-13638903	0	-	13483226	13630078	789624	10	111,79,120,107,80,85,121,68,219,10,	0,45206,50795,75781,86280,97670,104023,141958,146707,155667,
#Partially deleted in new
chr20	13587249	13638903	chr20:13587249-13638903	0	-	13587249	13587249	8553170	7	121,75,267,69,68,219,10,	0,13293,29607,36196,37935,42684,51644,
#Partially deleted in new
chr20	13587249	13638903	chr20:13587249-13638903	0	-	13587249	13587249	8553170	6	121,267,69,68,219,10,	0,29607,36196,37935,42684,51644,
#Partially deleted in new
chr20	13614666	13630011	chr20:13614666-13630011	0	-	13614760	13630011	789624	4	211,69,68,78,	0,8779,10518,15267,
#Partially deleted in new
chr20	13714321	13784886	chr20:13714321-13784886	3	-	13714873	13783140	789624	14	846,147,77,88,122,162,148,115,153,101,114,398,680,65,	0,3046,4586,14056,19399,45370,52455,55585,57009,58193,60835,61551,68182,70500,
#Partially deleted in new
chr20	13728398	13782597	chr20:13728398-13782597	1	-	13728413	13782513	789624	11	24,39,122,162,148,115,153,101,114,398,94,	0,28,5322,31293,38378,41508,42932,44116,46758,47474,54105,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	13784949	13821582	chr20:13784949-13821582	3	+	13785068	13817210	789624	11	341,41,64,48,104,40,198,61,84,83,4465,	0,2362,3639,8230,9888,13511,16536,23892,31513,31925,32168,
#Partially deleted in new
chr20	13785006	13818421	chr20:13785006-13818421	0	+	13785068	13814443	789624	12	284,41,64,48,104,40,198,61,98,84,83,1304,	0,2305,3582,8173,9831,13454,16479,23835,29411,31456,31868,32111,
#Partially deleted in new
chr20	13785049	13817228	chr20:13785049-13817228	1	+	13785068	13817210	789624	10	241,41,64,68,40,198,61,84,83,111,	0,2262,3539,8110,13411,16436,23792,31413,31825,32068,
#Partially deleted in new
chr20	13785069	13808865	chr20:13785069-13808865	0	+	13785069	13785069	8553170	8	221,41,64,48,104,40,176,24,	0,2242,3519,8110,9768,13391,16438,23772,
#Partially deleted in new
chr20	13785085	13808891	chr20:13785085-13808891	0	+	13785085	13785085	8553170	7	205,41,64,48,104,40,50,	0,2226,3503,8094,9752,13375,23756,
#Partially deleted in new
chr20	13785087	13817228	chr20:13785087-13817228	0	+	13785087	13785087	8553170	10	203,41,64,48,40,198,61,84,83,111,	0,2224,3501,8092,13373,16398,23754,31375,31787,32030,
#Partially deleted in new
chr20	13785087	13814438	chr20:13785087-13814438	0	+	13785087	13785087	8553170	8	203,41,64,48,40,198,61,21,	0,2224,3501,8092,13373,16398,23754,29330,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	13787149	13812995	chr20:13787149-13812995	0	+	13787149	13787149	8553170	8	203,64,68,104,40,198,61,25,	0,1439,6010,7688,11311,14336,21692,25821,
#Partially deleted in new
chr20	13787151	13794850	chr20:13787151-13794850	0	+	13787151	13787151	8553170	4	201,64,48,13,	0,1437,6028,7686,
#Partially deleted in new
chr20	13793179	13809001	chr20:13793179-13809001	0	+	13793179	13793179	8553170	5	48,104,40,198,160,	0,1658,5281,8306,15662,
#Partially deleted in new
chr20	13798460	13817228	chr20:13798460-13817228	0	+	13798460	13798460	8553170	5	40,198,61,83,111,	0,3025,10381,18414,18657,
#Partially deleted in new
chr20	13801542	13817228	chr20:13801542-13817228	0	+	13801542	13801542	8553170	7	141,56,61,98,84,83,111,	0,275,7299,12875,14920,15332,15575,
#Partially deleted in new
chr20	13801567	13803421	chr20:13801567-13803421	0	+	13801567	13801567	8553170	3	116,56,272,	0,250,1582,
#Deleted in new
chr20	13814076	13817228	chr20:13814076-13817228	0	+	13814076	13814076	8553170	4	439,84,83,111,	0,2386,2798,3041,
#Deleted in new
chr20	13816064	13817228	chr20:13816064-13817228	0	+	13816064	13816064	8553170	3	482,83,111,	0,810,1053,
#Deleted in new
chr20	13816657	13817228	chr20:13816657-13817228	0	+	13816657	13816657	8553170	2	300,111,	0,460,
#Partially deleted in new
chr20	13849246	13851419	chr20:13849246-13851419	0	-	13849246	13849246	8553170	3	358,129,96,	0,944,2077,
#Partially deleted in new
chr20	13849397	13870184	chr20:13849397-13870184	0	-	13865239	13870184	789624	5	207,129,75,88,44,	0,793,15769,20105,20743,
#Partially deleted in new
chr20	13849402	13990609	chr20:13849402-13990609	3	-	13849484	13990534	789624	20	202,129,173,75,166,149,88,63,78,69,57,155,82,60,54,163,103,169,56,133,	0,788,9859,15764,15946,17299,20100,20738,26635,28117,35944,36885,38366,38539,39056,64379,69618,82200,106673,141074,
#Partially deleted in new
chr20	13849402	13990616	chr20:13849402-13990616	1	-	13849484	13990534	789624	18	202,129,75,149,88,63,78,69,57,155,82,60,54,163,103,169,56,140,	0,788,15764,17299,20100,20738,26635,28117,35944,36885,38366,38539,39056,64379,69618,82200,106673,141074,
#Partially deleted in new
chr20	13849402	13990612	chr20:13849402-13990612	0	-	13913914	13990534	789624	21	202,129,173,75,166,149,88,63,78,69,57,155,82,60,54,163,121,103,169,56,136,	0,788,9859,15764,15946,17299,20100,20738,26635,28117,35944,36885,38366,38539,39056,64379,65718,69618,82200,106673,141074,
#Partially deleted in new
chr20	13849402	13995333	chr20:13849402-13995333	0	-	13859413	13919070	789624	19	202,129,173,75,149,88,63,78,69,57,155,82,60,54,163,103,169,56,311,	0,788,9859,15764,17299,20100,20738,26635,28117,35944,36885,38366,38539,39056,64379,69618,82200,106673,145620,
#Partially deleted in new
chr20	13849436	13995267	chr20:13849436-13995267	1	-	13849484	13919070	789624	17	171,129,75,149,88,63,78,69,155,82,60,54,163,103,169,56,245,	0,754,15730,17265,20066,20704,26601,28083,36851,38332,38505,39022,64345,69584,82166,106639,145586,
#Partially deleted in new
chr20	13850010	13870214	chr20:13850010-13870214	0	-	13850010	13850010	8553170	4	309,75,88,74,	0,15156,19492,20130,
#Partially deleted in new
chr20	13913463	13919123	chr20:13913463-13919123	0	-	13913463	13913463	8553170	3	481,121,103,	0,1657,5557,
#Partially deleted in new
chr20	13913861	13996443	chr20:13913861-13996443	0	-	13913861	13919070	789624	5	83,103,169,56,124,	0,5159,17741,42214,82458,
#Partially deleted in new
chr20	13927983	13931774	chr20:13927983-13931774	0	-	13927983	13927983	8553170	2	239,172,	0,3619,
#Partially deleted in new
chr20	13928038	13931763	chr20:13928038-13931763	0	-	13928038	13928038	8553170	2	278,161,	0,3564,
#Deleted in new
chr20	13973315	13973424	chr20:13973315-13973424	3	-	13973315	13973315	8553170	1	109,	0,
#Partially deleted in new
chr20	13995368	16053197	chr20:13995368-16053197	3	+	13995763	16049876	0	17	441,117,108,30,117,122,31,74,82,48,63,69,78,75,93,78,3368,	0,6919,90252,498110,689474,1234571,1436036,1504405,1867376,1890395,1937907,1942107,1972184,1991358,1991697,2045832,2054461,
#Partially deleted in new
chr20	13995494	14494087	chr20:13995494-14494087	0	+	13995494	13995494	8553170	4	315,117,108,609,	0,6793,90126,497984,
#Partially deleted in new
chr20	13995501	14053679	chr20:13995501-14053679	0	+	13995501	13995501	8553170	4	308,117,99,581,	0,6786,56420,57597,
#Partially deleted in new
chr20	13995502	14051860	chr20:13995502-14051860	0	+	13995502	13995502	8553170	3	307,117,62,	0,6785,56296,
#Partially deleted in new
chr20	13995658	16050041	chr20:13995658-16050041	1	+	13995763	16049876	789624	18	151,117,108,30,117,122,31,74,82,48,84,63,69,78,75,93,78,212,	0,6629,89962,497820,689184,1234281,1435746,1504115,1867086,1890105,1897268,1937617,1941817,1971894,1991068,1991407,2045542,2054171,
#Partially deleted in new
chr20	13995680	14053679	chr20:13995680-14053679	0	+	13995680	13995680	8553170	4	129,117,99,536,	0,6607,56241,57463,
#Partially deleted in new
chr20	13995736	14566933	chr20:13995736-14566933	0	+	13995736	13995736	8553170	5	73,117,108,30,368,	0,6551,89884,497742,570829,
#Partially deleted in new
chr20	13995772	14685079	chr20:13995772-14685079	0	+	13995772	13995772	8553170	5	37,117,108,30,237,	0,6515,89848,497706,689070,
#Deleted in new
chr20	14003507	14003699	chr20:14003507-14003699	7	+	14003507	14003507	16724991	1	192,	0,
#Partially deleted in new
chr20	14127399	14128336	chr20:14127399-14128336	7	+	14127399	14127399	16724991	1	937,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	14223040	14223325	chr20:14223040-14223325	3	+	14223040	14223040	8553170	1	285,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	14322987	14337608	chr20:14322987-14337608	3	-	14325556	14327506	0	2	4571,205,	0,14416,
#Deleted in new
chr20	14323994	14337616	chr20:14323994-14337616	1	-	14325556	14327506	0	3	3564,194,213,	0,5139,13409,
#Deleted in new
chr20	14328921	14337614	chr20:14328921-14337614	0	-	14328921	14328921	8553170	2	406,211,	0,8482,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	14352319	14352425	chr20:14352319-14352425	3	+	14352319	14352319	8553170	1	106,	0,
#Partially deleted in new
chr20	14493478	14888668	chr20:14493478-14888668	0	+	14493478	14493478	8553170	4	30,117,100,526,	0,191364,356425,394664,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	14523390	14895581	chr20:14523390-14895581	0	+	14523390	14523390	8553170	3	64,117,2879,	0,161452,369312,
#Partially deleted in new
chr20	14523397	14850506	chr20:14523397-14850506	0	+	14523397	14523397	8553170	3	57,117,603,	0,161445,326506,
#Deleted in new
chr20	14547183	14547623	chr20:14547183-14547623	7	-	14547183	14547183	16724991	1	440,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	14554383	14628908	chr20:14554383-14628908	3	+	14554383	14554383	789624	5	45,164,141,43,272,	0,67382,68490,72680,74253,
#Partially deleted in new
chr20	14626912	14636524	chr20:14626912-14636524	1	+	14626912	14626912	8553170	4	194,193,109,79,	0,1724,4928,9533,
#Deleted in new
chr20	14757562	14758056	chr20:14757562-14758056	7	+	14757562	14757562	16724991	1	494,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	14884252	14929486	chr20:14884252-14929486	3	-	14884252	14884252	789624	3	342,209,112,	0,3843,45122,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	14904940	14929515	chr20:14904940-14929515	1	-	14904940	14904940	789624	2	1089,141,	0,24434,
#Partially deleted in new
chr20	14933842	14935363	chr20:14933842-14935363	3	-	14933842	14933842	8553170	3	100,145,126,	0,1087,1395,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	15021552	15021659	chr20:15021552-15021659	3	-	15021552	15021552	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	15022851	15022958	chr20:15022851-15022958	3	+	15022851	15022851	8553170	1	107,	0,
#Partially deleted in new
chr20	15196857	16053197	chr20:15196857-16053197	1	+	15862804	16049876	0	14	175,122,31,74,82,48,63,69,78,75,93,78,69,3368,	0,33082,234547,302916,665887,688906,736418,740618,770695,789869,790208,844343,847713,852972,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	15280763	15280873	chr20:15280763-15280873	7	-	15280763	15280763	16724991	1	110,	0,
#Deleted in new
chr20	15552156	15552885	chr20:15552156-15552885	3	-	15552156	15552156	8553170	2	245,274,	0,455,
#Deleted in new
chr20	15619493	15619819	chr20:15619493-15619819	7	-	15619493	15619493	16724991	1	326,	0,
#Partially deleted in new
chr20	15862742	16053197	chr20:15862742-16053197	1	+	15862804	16049876	0	10	84,48,63,69,78,75,93,78,69,3368,	0,23021,70533,74733,104810,123984,124323,178458,181828,187087,
#Partially deleted in new
chr20	15933275	16044592	chr20:15933275-16044592	0	+	15933275	15933275	8553170	7	111,69,78,75,93,78,22,	0,4200,34277,53451,53790,107925,111295,
#Partially deleted in new
chr20	16223749	16224535	chr20:16223749-16224535	7	-	16223749	16223749	16724991	2	332,139,	0,647,
#Partially deleted in new
chr20	16272103	16573433	chr20:16272103-16573433	3	-	16273252	16573275	0	26	1308,84,90,123,51,97,153,1359,54,89,83,138,52,120,60,66,176,132,169,143,110,98,117,114,70,205,	0,40231,63822,84226,98482,99561,102153,106701,109590,132709,134270,155000,156849,157759,222187,225509,232268,233618,233918,235854,239314,240722,243444,253988,256267,301125,
#Partially deleted in new
chr20	16272103	16573434	chr20:16272103-16573434	1	-	16273252	16573275	789624	25	1308,84,90,123,51,97,1359,54,89,83,138,52,120,60,66,176,132,169,143,110,98,117,114,70,206,	0,40231,63822,84226,98482,99561,106701,109590,132709,134270,155000,156849,157759,222187,225509,232268,233618,233918,235854,239314,240722,243444,253988,256267,301125,
#Partially deleted in new
chr20	16273252	16371763	chr20:16273252-16371763	1	-	16273252	16371763	789624	6	159,84,90,123,51,99,	0,39082,62673,83077,97333,98412,
#Partially deleted in new
chr20	16366842	16573433	chr20:16366842-16573433	1	-	16367145	16573275	0	23	984,51,97,153,1359,54,89,83,138,52,120,60,66,176,132,169,143,110,98,117,114,70,205,	0,3743,4822,7414,11962,14851,37970,39531,60261,62110,63020,127448,130770,137529,138879,139179,141115,144575,145983,148705,159249,161528,206386,
#Partially deleted in new
chr20	16366842	16370636	chr20:16366842-16370636	0	-	16367145	16370636	789624	2	2424,51,	0,3743,
#Partially deleted in new
chr20	16379749	16404867	chr20:16379749-16404867	0	-	16379749	16404867	789624	4	414,54,33,55,	0,1944,2348,25063,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	16576067	16579615	chr20:16576067-16579615	3	+	16576067	16576067	8553170	2	37,737,	0,2811,
#Deleted in new
chr20	16580257	16580622	chr20:16580257-16580622	3	+	16580257	16580257	8553170	1	365,	0,
#Deleted in new
chr20	16586332	16586693	chr20:16586332-16586693	7	-	16586332	16586332	16724991	1	361,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	16670640	16670742	chr20:16670640-16670742	3	-	16670640	16670640	8553170	1	102,	0,
#Deleted in new
chr20	16684107	16684404	chr20:16684107-16684404	7	-	16684107	16684107	16724991	1	297,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	16714843	16730948	chr20:16714843-16730948	3	-	16714843	16714843	8553170	4	440,128,93,440,	0,2701,3394,15665,
#Partially deleted in new
chr20	16718304	16729880	chr20:16718304-16729880	1	-	16718304	16718304	8553170	3	26,147,452,	0,1711,11124,
#Partially deleted in new
chr20	16729960	16741776	chr20:16729960-16741776	1	+	16731702	16741005	0	7	104,99,173,141,51,89,931,	0,1707,2203,7300,8891,10364,10885,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	16729983	16742563	chr20:16729983-16742563	3	+	16731702	16741005	0	7	181,99,173,141,51,89,1718,	0,1684,2180,7277,8868,10341,10862,
#Partially deleted in new
chr20	16730028	16732468	chr20:16730028-16732468	0	+	16730028	16730028	8553170	3	136,99,305,	0,1639,2135,
#Deleted in new
chr20	16748357	16752164	chr20:16748357-16752164	3	+	16748401	16751118	789624	4	159,140,108,1070,	0,509,1545,2737,
#Deleted in new
chr20	16749359	16751782	chr20:16749359-16751782	0	+	16749359	16749359	8553170	3	115,244,688,	0,407,1735,
#Partially deleted in new
chr20	16749373	16770062	chr20:16749373-16770062	0	+	16749373	16749373	8553170	3	101,81,389,	0,14948,20300,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	16857961	16864148	chr20:16857961-16864148	3	-	16857961	16857961	8553170	3	533,133,167,	0,1342,6020,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	17187509	17187616	chr20:17187509-17187616	3	+	17187509	17187509	8553170	1	107,	0,
#Deleted in new
chr20	17188133	17188344	chr20:17188133-17188344	7	+	17188133	17188133	16724991	1	211,	0,
#Partially deleted in new
chr20	17226106	17484578	chr20:17226106-17484578	1	+	17227362	17482070	789624	13	273,153,105,114,109,38,77,89,176,216,101,228,2995,	0,1223,34133,132220,134425,143133,183156,203328,210601,227635,230241,239219,255477,
#Partially deleted in new
chr20	17226990	17484578	chr20:17226990-17484578	3	+	17227305	17482070	789624	12	492,105,114,109,38,77,89,176,216,101,228,2995,	0,33249,131336,133541,142249,182272,202444,209717,226751,229357,238335,254593,
#Partially deleted in new
chr20	17227055	17482283	chr20:17227055-17482283	1	+	17227305	17482070	789624	11	427,114,109,38,77,89,176,216,101,228,700,	0,131271,133476,142184,182207,202379,209652,226686,229292,238270,254528,
#Partially deleted in new
chr20	17228130	17409310	chr20:17228130-17409310	0	+	17228130	17228130	8553170	6	172,105,114,109,38,48,	0,32109,130196,132401,141109,181132,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	17463432	17482287	chr20:17463432-17482287	0	+	17463432	17463432	8553170	2	2121,704,	0,18151,
#Deleted in new
chr20	17479084	17479431	chr20:17479084-17479431	7	-	17479084	17479084	16724991	1	347,	0,
#Partially deleted in new
chr20	17493904	17558960	chr20:17493904-17558960	1	-	17494073	17558689	789624	8	1125,86,221,108,93,96,61,273,	0,3033,4915,14984,18071,20816,30943,64783,
#Partially deleted in new
chr20	17493904	17531369	chr20:17493904-17531369	3	-	17494073	17531329	789624	8	1125,86,221,108,93,96,61,417,	0,3033,4915,14984,18071,20816,30943,37048,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	17506827	17514741	chr20:17506827-17514741	0	-	17506827	17506827	8553170	4	275,108,93,21,	0,2061,5148,7893,
#Partially deleted in new
chr20	17511991	17569220	chr20:17511991-17569220	0	-	17511991	17511991	8553170	7	77,96,61,222,77,122,50,	0,2729,12856,48365,48715,50982,57179,
#Deleted in new
chr20	17516842	17517307	chr20:17516842-17517307	7	+	17516842	17516842	16724991	1	465,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	17565500	17565851	chr20:17565500-17565851	3	-	17565500	17565500	8553170	1	351,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	17569862	17609919	chr20:17569862-17609919	3	+	17570208	17607146	789624	4	349,308,77,2883,	0,30875,34692,37174,
#Partially deleted in new
chr20	17570081	17608242	chr20:17570081-17608242	1	+	17600785	17607146	789624	5	130,132,308,77,1206,	0,21850,30656,34473,36955,
#Partially deleted in new
chr20	17570089	17607222	chr20:17570089-17607222	0	+	17570208	17605129	789624	5	122,308,77,102,186,	0,30648,34465,35020,36947,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	17576205	17576510	chr20:17576205-17576510	3	-	17576205	17576205	8553170	1	305,	0,
#Deleted in new
chr20	17599254	17599807	chr20:17599254-17599807	7	-	17599254	17599254	16724991	1	553,	0,
#Partially deleted in new
chr20	17613677	17660507	chr20:17613677-17660507	1	-	17614181	17660507	789624	23	543,144,99,84,108,84,96,72,93,90,84,93,93,91,35,179,139,154,119,153,123,149,1912,	0,1059,1753,2248,3054,4918,5955,6621,7037,7780,8012,8177,10898,11834,13670,13826,16145,19782,21868,22899,28119,29301,44918,
#Partially deleted in new
chr20	17613677	17682295	chr20:17613677-17682295	3	-	17614181	17660507	789624	25	543,144,99,84,108,84,96,72,93,90,84,93,93,91,35,179,139,154,119,153,123,149,85,549,268,	0,1059,1753,2248,3054,4918,5955,6621,7037,7780,8012,8177,10898,11834,13670,13826,16145,19782,21868,22899,28119,29301,44927,46302,68350,
#Partially deleted in new
chr20	17613677	17682283	chr20:17613677-17682283	1	-	17614181	17660507	789624	26	543,144,99,84,108,84,96,72,93,90,84,93,93,91,35,179,139,154,119,153,123,149,85,549,77,256,	0,1059,1753,2248,3054,4918,5955,6621,7037,7780,8012,8177,10898,11834,13670,13826,16145,19782,21868,22899,28119,29301,44927,46302,66321,68350,
#Partially deleted in new
chr20	17613677	17682233	chr20:17613677-17682233	1	-	17614181	17660507	789624	25	543,144,99,84,108,84,96,72,93,90,84,93,93,91,35,179,139,154,119,153,123,149,1933,77,206,	0,1059,1753,2248,3054,4918,5955,6621,7037,7780,8012,8177,10898,11834,13670,13826,16145,19782,21868,22899,28119,29301,44918,66321,68350,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	17613677	17619817	chr20:17613677-17619817	0	-	17613677	17613677	8553170	6	543,144,99,84,108,1222,	0,1059,1753,2248,3054,4918,
#Partially deleted in new
chr20	17613677	17623330	chr20:17613677-17623330	1	-	17614181	17621905	789624	13	543,141,99,84,108,84,96,72,93,90,84,93,483,	0,1062,1753,2248,3054,4918,5955,6621,7037,7780,8012,8177,9170,
#Partially deleted in new
chr20	17613677	17659973	chr20:17613677-17659973	1	-	17614181	17659973	789624	24	543,144,99,84,108,84,96,72,93,90,84,93,93,91,35,179,139,154,119,153,123,149,289,195,	0,1059,1753,2248,3054,4918,5955,6621,7037,7780,8012,8177,10898,11834,13670,13826,16145,19782,21868,22899,28119,29301,44918,46101,
#Partially deleted in new
chr20	17614127	17682060	chr20:17614127-17682060	1	-	17614181	17643062	789624	24	93,144,99,84,108,84,96,72,93,90,84,93,93,91,35,179,139,154,119,153,123,149,77,33,	0,609,1303,1798,2604,4468,5505,6171,6587,7330,7562,7727,10448,11384,13220,13376,15695,19332,21418,22449,27669,28851,65871,67900,
#Partially deleted in new
chr20	17627359	17658932	chr20:17627359-17658932	0	-	17627622	17658932	789624	5	23,179,139,154,337,	0,144,2463,6100,31236,
#Deleted in new
chr20	17641444	17643085	chr20:17641444-17643085	0	-	17641444	17641444	8553170	2	475,107,	0,1534,
#Partially deleted in new
chr20	17659605	17682295	chr20:17659605-17682295	0	-	17659605	17660507	789624	2	923,268,	0,22422,
#Partially deleted in new
chr20	17693671	17735860	chr20:17693671-17735860	1	+	17693688	17735811	789624	3	35,129,196,	0,31351,41993,
#Partially deleted in new
chr20	17699941	17725151	chr20:17699941-17725151	0	+	17725025	17725151	789624	3	114,380,129,	0,12219,25081,
#Partially deleted in new
chr20	17699947	17735871	chr20:17699947-17735871	3	+	17725025	17735811	789624	3	108,129,207,	0,25075,35717,
#Partially deleted in new
chr20	17699959	17735871	chr20:17699959-17735871	1	+	17725025	17735811	789624	4	96,163,129,207,	0,22756,25063,35705,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	17731178	17735798	chr20:17731178-17735798	0	+	17731178	17731178	8553170	2	330,134,	0,4486,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	17887362	17888160	chr20:17887362-17888160	3	-	17887362	17887362	8553170	2	442,190,	0,608,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	17903761	17903861	chr20:17903761-17903861	3	+	17903761	17903761	8553170	1	100,	0,
#Partially deleted in new
chr20	17941596	17968720	chr20:17941596-17968720	1	-	17942356	17968425	0	13	811,86,160,87,40,76,106,96,124,122,111,105,346,	0,1513,5889,7293,7467,8535,8694,9903,10990,12399,13768,15336,26778,
#Partially deleted in new
chr20	17941596	17968980	chr20:17941596-17968980	3	-	17942356	17968425	0	14	811,86,160,87,40,76,106,96,124,122,111,105,83,281,	0,1513,5889,7293,7467,8535,8694,9903,10990,12399,13768,15336,26778,27103,
#Partially deleted in new
chr20	17941596	17961995	chr20:17941596-17961995	0	-	17941596	17941596	8553170	14	811,86,160,87,40,76,106,307,96,124,122,111,105,856,	0,1513,5889,7293,7467,8535,8694,9424,9903,10990,12399,13768,15336,19543,
#Partially deleted in new
chr20	17941596	17968800	chr20:17941596-17968800	0	-	17941596	17941596	8553170	13	811,86,160,87,40,76,106,96,124,122,111,105,101,	0,1513,5889,7293,7467,8535,8694,9903,10990,12399,13768,15336,27103,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	17941599	17943622	chr20:17941599-17943622	0	-	17941599	17941599	8553170	2	808,513,	0,1510,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	17941599	17945530	chr20:17941599-17945530	0	-	17941599	17941599	8553170	1	3931,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	17941833	17947621	chr20:17941833-17947621	0	-	17941833	17941833	8553170	4	574,86,23,136,	0,1276,2288,5652,
#Partially deleted in new
chr20	17942137	17954024	chr20:17942137-17954024	0	-	17942137	17942137	8553170	9	270,86,160,87,40,76,106,96,29,	0,972,5348,6752,6926,7994,8153,9362,11858,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	17947147	17951537	chr20:17947147-17951537	0	-	17947480	17951537	789624	6	498,87,40,76,106,38,	0,1742,1916,2984,3143,4352,
#Partially deleted in new
chr20	17948889	17968458	chr20:17948889-17968458	0	-	17948889	17968425	789624	9	87,40,76,106,96,124,122,105,84,	0,174,1242,1401,2610,3697,5106,8043,19485,
#Partially deleted in new
chr20	17949097	17968511	chr20:17949097-17968511	0	-	17949097	17968425	789624	8	6,76,106,96,124,122,111,137,	0,1034,1193,2402,3489,4898,6267,19277,
#Partially deleted in new
chr20	17950321	17956946	chr20:17950321-17956946	0	-	17950321	17950321	8553170	6	75,96,124,236,111,14,	0,1178,2265,3674,5043,6611,
#Partially deleted in new
chr20	17951525	17968756	chr20:17951525-17968756	0	-	17951525	17951525	8553170	6	70,124,228,111,105,57,	0,1061,2470,3839,5407,17174,
#Partially deleted in new
chr20	17953995	17962192	chr20:17953995-17962192	0	-	17953995	17953995	8553170	5	228,111,105,187,84,	0,1369,2937,7144,8113,
#Partially deleted in new
chr20	17954129	17968760	chr20:17954129-17968760	0	-	17954129	17954129	8553170	4	94,111,105,386,	0,1235,2803,14245,
#Partially deleted in new
chr20	17956978	18059188	chr20:17956978-18059188	0	-	17956978	17956978	8553170	4	59,192,190,109,	0,39582,84555,102101,
#Deleted in new
chr20	17962709	17962946	chr20:17962709-17962946	3	-	17962709	17962709	789624	1	237,	0,
#Deleted in new
chr20	17967687	17968774	chr20:17967687-17968774	1	-	17968044	17968425	0	1	1087,	0,
#Deleted in new
chr20	17967687	17968785	chr20:17967687-17968785	1	-	17968044	17968425	789624	2	474,411,	0,687,
#Deleted in new
chr20	17967918	17968811	chr20:17967918-17968811	1	-	17968244	17968425	789624	3	371,79,112,	0,456,781,
#Deleted in new
chr20	17968107	17968794	chr20:17968107-17968794	1	-	17968244	17968425	789624	2	182,420,	0,267,
#Partially deleted in new
chr20	17968912	17991122	chr20:17968912-17991122	3	+	17969859	17990109	789624	5	229,570,220,133,1184,	0,888,6771,19253,21026,
#Partially deleted in new
chr20	17969072	17991122	chr20:17969072-17991122	1	+	17969859	17990109	789624	5	69,330,220,133,1184,	0,728,6611,19093,20866,
#Partially deleted in new
chr20	17969114	17991122	chr20:17969114-17991122	1	+	17969859	17990186	789624	3	27,570,1184,	0,686,20824,
#Partially deleted in new
chr20	17970030	17990409	chr20:17970030-17990409	0	+	17970030	17970030	8553170	2	100,471,	0,19908,
#Partially deleted in new
chr20	17970056	17990231	chr20:17970056-17990231	0	+	17970056	17970056	8553170	3	314,133,293,	0,18109,19882,
#Deleted in new
chr20	18011954	18012284	chr20:18011954-18012284	7	+	18011954	18011954	16724991	1	330,	0,
#Partially deleted in new
chr20	18024151	18057877	chr20:18024151-18057877	3	-	18024635	18057634	789624	4	801,190,221,343,	0,17382,32505,33383,
#Partially deleted in new
chr20	18024261	18059050	chr20:18024261-18059050	0	-	18024261	18024261	8553170	4	691,190,221,161,	0,17272,32395,34628,
#Partially deleted in new
chr20	18024261	18059188	chr20:18024261-18059188	0	-	18024261	18024261	8553170	3	691,190,109,	0,17272,34818,
#Partially deleted in new
chr20	18041604	18050739	chr20:18041604-18050739	0	-	18041604	18041604	8553170	2	119,99,	0,9036,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	18059492	18071008	chr20:18059492-18071008	3	+	18059492	18059492	8553170	2	232,168,	0,11348,
#Deleted in new
chr20	18090115	18090715	chr20:18090115-18090715	7	-	18090115	18090115	16724991	1	600,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	18095570	18095632	chr20:18095570-18095632	3	-	18095570	18095570	8553170	1	62,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	18113466	18113579	chr20:18113466-18113579	3	-	18113466	18113466	8553170	1	113,	0,
#Partially deleted in new
chr20	18137872	18143169	chr20:18137872-18143169	3	+	18137955	18142357	789624	2	179,962,	0,4335,
#Partially deleted in new
chr20	18138117	18142829	chr20:18138117-18142829	0	+	18142660	18142829	789624	2	327,622,	0,4090,
#Partially deleted in new
chr20	18138205	18142546	chr20:18138205-18142546	0	+	18138205	18138205	8553170	2	194,339,	0,4002,
#Partially deleted in new
chr20	18138205	18142457	chr20:18138205-18142457	0	+	18138205	18138205	8553170	2	130,250,	0,4002,
#Partially deleted in new
chr20	18138236	18142421	chr20:18138236-18142421	0	+	18138236	18138236	8553170	2	268,214,	0,3971,
#Partially deleted in new
chr20	18142319	18188387	chr20:18142319-18188387	3	+	18142660	18187459	789624	10	600,119,122,182,420,569,137,176,191,1102,	0,2913,8501,16764,19500,20057,39390,40803,42282,44966,
#Partially deleted in new
chr20	18142451	18188387	chr20:18142451-18188387	1	+	18142660	18187459	789624	10	468,119,122,182,417,569,137,176,191,1102,	0,2781,8369,16632,19371,19925,39258,40671,42150,44834,
#Partially deleted in new
chr20	18145098	18188387	chr20:18145098-18188387	1	+	18150826	18187459	789624	9	253,122,182,420,569,137,176,191,1102,	0,5722,13985,16721,17278,36611,38024,39503,42187,
#Deleted in new
chr20	18220112	18220512	chr20:18220112-18220512	7	+	18220112	18220112	16724991	1	400,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	18258553	18258851	chr20:18258553-18258851	3	-	18258553	18258553	8553170	1	298,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	18265689	18265879	chr20:18265689-18265879	3	-	18265689	18265689	8553170	1	190,	0,
#Partially deleted in new
chr20	18288282	18316994	chr20:18288282-18316994	3	+	18305686	18316816	789624	6	322,78,171,127,96,1923,	0,9702,16725,17398,18015,26789,
#Partially deleted in new
chr20	18288282	18316994	chr20:18288282-18316994	1	+	18305686	18316816	789624	5	322,171,127,96,1926,	0,16725,17398,18015,26786,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	18288282	18316994	chr20:18288282-18316994	1	+	18310278	18316816	789624	5	322,140,96,138,1926,	0,17385,18015,21886,26786,
#Partially deleted in new
chr20	18288282	18316994	chr20:18288282-18316994	1	+	18288441	18316816	789624	3	322,96,1923,	0,18015,26789,
#Partially deleted in new
chr20	18288282	18316994	chr20:18288282-18316994	1	+	18288441	18316816	789624	2	322,1923,	0,26789,
#Partially deleted in new
chr20	18288282	18316994	chr20:18288282-18316994	1	+	18305686	18316816	789624	5	322,176,140,96,1926,	0,1616,17385,18015,26786,
#Partially deleted in new
chr20	18288476	18316996	chr20:18288476-18316996	1	+	18305686	18316816	789624	7	128,78,176,171,127,96,1925,	0,9508,9812,16531,17204,17821,26595,
#Partially deleted in new
chr20	18288504	18315106	chr20:18288504-18315106	0	+	18305686	18315106	789624	6	100,78,127,96,42,38,	0,9480,17176,17793,18201,26564,
#Partially deleted in new
chr20	18288510	18316991	chr20:18288510-18316991	1	+	18298059	18316816	789624	5	94,78,127,96,1923,	0,9474,17170,17787,26558,
#Partially deleted in new
chr20	18288528	18315279	chr20:18288528-18315279	0	+	18305686	18315279	789624	4	76,140,96,211,	0,17139,17769,26540,
#Partially deleted in new
chr20	18288528	18316994	chr20:18288528-18316994	1	+	18315136	18316816	789624	2	76,1923,	0,26543,
#Partially deleted in new
chr20	18288559	18315376	chr20:18288559-18315376	0	+	18305686	18306293	789624	4	45,140,123,308,	0,17108,17711,26509,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	18295142	18295451	chr20:18295142-18295451	3	-	18295142	18295142	8553170	1	309,	0,
#Partially deleted in new
chr20	18297984	18316996	chr20:18297984-18316996	1	+	18305686	18316816	789624	4	78,140,96,1928,	0,7683,8313,17084,
#Partially deleted in new
chr20	18305084	18315388	chr20:18305084-18315388	0	+	18305686	18315388	789624	4	94,127,96,320,	0,596,1213,9984,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	18312635	18316996	chr20:18312635-18316996	0	+	18312635	18312635	8553170	2	2132,1928,	0,2433,
#Deleted in new
chr20	18313764	18315111	chr20:18313764-18315111	3	-	18313764	18313764	8553170	2	199,59,	0,1288,
#Partially deleted in new
chr20	18379048	18381484	chr20:18379048-18381484	3	+	18379048	18379048	789624	2	21,706,	0,1730,
#Deleted in new
chr20	18380771	18381481	chr20:18380771-18381481	0	+	18380771	18380771	8553170	1	710,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr20	18383366	18467030	chr20:18383366-18467030	0	-	18433700	18465358	789624	20	1198,75,128,81,101,97,75,104,208,165,123,93,114,118,86,97,115,154,128,35,	0,1649,6334,7012,10344,10887,13105,15156,29279,30981,31960,43700,50285,59980,65617,70364,71880,76786,81883,83629,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	18383366	18394703	chr20:18383366-18394703	0	-	18384398	18394703	789624	7	1198,75,128,81,101,97,29,	0,1649,6334,7012,10344,10887,11308,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr20	18383368	18467185	chr20:18383368-18467185	3	-	18384398	18465358	789624	21	1196,75,128,81,101,97,75,104,190,165,123,93,114,118,86,68,97,115,154,128,190,	0,1647,6332,7010,10342,10885,13103,15154,29277,30979,31958,43698,50283,59978,65615,69246,70362,71878,76784,81881,83627,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr20	18383370	18454639	chr20:18383370-18454639	1	-	18384398	18449015	789624	17	1194,75,128,81,101,97,75,104,208,165,123,93,114,118,86,68,909,	0,1645,6330,7008,10340,10883,13101,15152,29275,30977,31956,43696,50281,59976,65613,69244,70360,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr20	18383370	18465381	chr20:18383370-18465381	1	-	18384398	18465358	789624	20	1194,75,128,81,101,97,75,104,190,165,123,93,114,118,86,68,97,115,154,132,	0,1645,6330,7008,10340,10883,13101,15152,29275,30977,31956,43696,50281,59976,65613,69244,70360,71876,76782,81879,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr20	18383379	18466993	chr20:18383379-18466993	0	-	18451935	18465358	789624	22	1185,75,128,81,101,97,75,104,190,165,123,93,114,118,86,109,68,97,115,154,128,132,	0,1636,6321,6999,10331,10874,13092,15143,29266,30968,31947,43687,50272,59967,65604,68474,69235,70351,71867,76773,81870,83482,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr20	18384076	18467281	chr20:18384076-18467281	0	-	18394744	18465358	789624	22	488,75,128,81,101,97,184,75,104,190,165,123,93,114,118,86,68,97,115,154,203,286,	0,939,5624,6302,9634,10177,10598,12395,14446,28569,30271,31250,42990,49575,59270,64907,68538,69654,71170,76076,81173,82919,
#Partially deleted in new
chr20	18384398	18433765	chr20:18384398-18433765	1	-	18384398	18433765	789624	12	166,75,128,81,101,97,75,104,190,165,93,114,	0,617,5302,5980,9312,9855,12073,14124,28247,29949,42668,49253,
#Partially deleted in new
chr20	18393713	18413222	chr20:18393713-18413222	0	-	18393713	18412691	789624	6	98,97,75,104,208,255,	0,540,2758,4809,18932,19254,
#Duplicated in new
chr20	18398343	18467001	chr20:18398343-18467001	0	-	18433700	18465358	789624	14	283,208,165,123,93,100,1271,118,86,97,115,154,203,140,	0,14302,16004,16983,28723,30276,34151,45003,50640,55387,56903,61809,66906,68518,
#Partially deleted in new
chr20	18412719	18448988	chr20:18412719-18448988	0	-	18412719	18412719	8553170	5	134,93,114,118,5,	0,14347,20932,30627,36264,
#Deleted in new
chr20	18420159	18421454	chr20:18420159-18421454	7	-	18420159	18420159	16724991	1	1295,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	18433841	18433944	chr20:18433841-18433944	7	+	18433841	18433841	16724991	1	103,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	18467126	18484643	chr20:18467126-18484643	3	+	18467506	18483558	0	9	442,118,68,68,113,144,108,192,1163,	0,1817,5715,6264,7948,12911,13275,14492,16354,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	18467388	18469368	chr20:18467388-18469368	0	+	18467388	18467388	8553170	2	180,425,	0,1555,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	18467388	18484643	chr20:18467388-18484643	0	+	18467388	18467388	789624	9	283,118,68,68,113,144,108,192,1163,	0,1555,5453,6002,7686,12649,13013,14230,16092,
#Partially deleted in new
chr20	18467394	18483826	chr20:18467394-18483826	0	+	18467394	18467394	8553170	4	174,68,108,346,	0,5447,13007,16086,
#Partially deleted in new
chr20	18467430	18473011	chr20:18467430-18473011	0	+	18467430	18467430	8553170	3	138,118,170,	0,1513,5411,
#Partially deleted in new
chr20	18467447	18483563	chr20:18467447-18483563	0	+	18467447	18467447	8553170	7	121,68,68,113,144,108,83,	0,5394,5943,7627,12590,12954,16033,
#Deleted in new
chr20	18470614	18470691	chr20:18470614-18470691	3	+	18470614	18470614	5263520	1	77,	0,
#Partially deleted in new
chr20	18485264	18486052	chr20:18485264-18486052	7	+	18485264	18485264	16724991	2	362,116,	0,672,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	18486539	18497243	chr20:18486539-18497243	3	-	18489763	18497167	0	5	3451,86,106,43,175,	0,3855,7418,9298,10529,
#Partially deleted in new
chr20	18489287	18497180	chr20:18489287-18497180	0	-	18489287	18489287	8553170	3	703,106,112,	0,4670,7781,
#Partially deleted in new
chr20	18489458	18497174	chr20:18489458-18497174	0	-	18489458	18489458	8553170	4	532,86,106,106,	0,936,4499,7610,
#Partially deleted in new
chr20	18504632	18505066	chr20:18504632-18505066	7	+	18504632	18504632	16724991	1	434,	0,
#Partially deleted in new
chr20	18507481	18561415	chr20:18507481-18561415	3	+	18510835	18560740	789624	20	491,235,58,87,237,86,145,159,116,124,81,90,107,154,78,162,87,156,66,765,	0,3340,4743,8168,16951,17453,18306,18891,20014,23198,25182,28171,34814,35537,38474,41127,43607,46753,47626,53169,
#Partially deleted in new
chr20	18507519	18561415	chr20:18507519-18561415	1	+	18510835	18560740	789624	20	471,235,58,87,237,86,145,159,116,124,81,90,107,154,78,162,87,156,66,765,	0,3302,4705,8130,16913,17415,18268,18853,19976,23160,25144,28133,34776,35499,38436,41089,43569,46715,47588,53131,
#Partially deleted in new
chr20	18507543	18526531	chr20:18507543-18526531	0	+	18510835	18526531	789624	8	126,235,58,87,237,86,145,159,	0,3278,4681,8106,16889,17391,18244,18829,
#Partially deleted in new
chr20	18507543	18510991	chr20:18507543-18510991	0	+	18510835	18510991	789624	3	126,207,170,	0,547,3278,
#Partially deleted in new
chr20	18507554	18561122	chr20:18507554-18561122	1	+	18510835	18560740	789624	20	476,235,58,87,237,86,145,159,116,124,81,90,107,154,78,162,87,156,66,472,	0,3267,4670,8095,16878,17380,18233,18818,19941,23125,25109,28098,34741,35464,38401,41054,43534,46680,47553,53096,
#Partially deleted in new
chr20	18507889	18561055	chr20:18507889-18561055	1	+	18510835	18560740	789624	20	101,235,58,87,183,86,145,159,116,124,81,90,107,154,78,162,87,156,66,405,	0,2932,4335,7760,16597,17045,17898,18483,19606,22790,24774,27763,34406,35129,38066,40719,43199,46345,47218,52761,
#Partially deleted in new
chr20	18507932	18510931	chr20:18507932-18510931	0	+	18510835	18510931	789624	2	122,110,	0,2889,
#Partially deleted in new
chr20	18507939	18561415	chr20:18507939-18561415	1	+	18510835	18560740	789624	20	358,235,58,87,237,86,145,159,116,124,81,90,107,154,78,162,87,156,66,765,	0,2882,4285,7710,16493,16995,17848,18433,19556,22740,24724,27713,34356,35079,38016,40669,43149,46295,47168,52711,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	18507939	18511014	chr20:18507939-18511014	0	+	18510835	18511014	789624	3	51,328,193,	0,1676,2882,
#Partially deleted in new
chr20	18507939	18561415	chr20:18507939-18561415	1	+	18510835	18560740	8553170	20	33,235,58,87,237,86,145,159,116,124,81,90,107,154,78,162,87,156,66,765,	0,2882,4285,7710,16493,16995,17848,18433,19556,22740,24724,27713,34356,35079,38016,40669,43149,46295,47168,52711,
#Partially deleted in new
chr20	18510976	18515984	chr20:18510976-18515984	0	+	18510976	18510976	8553170	3	80,58,335,	0,1248,4673,
#Partially deleted in new
chr20	18542367	18560833	chr20:18542367-18560833	0	+	18542367	18560740	789624	7	35,154,78,162,156,66,183,	0,651,3588,6241,11867,12740,18283,
#Partially deleted in new
chr20	18567346	18569563	chr20:18567346-18569563	1	+	18567478	18569405	789624	2	250,325,	0,1892,
#Partially deleted in new
chr20	18567419	18569563	chr20:18567419-18569563	3	+	18567478	18569405	789624	2	177,328,	0,1816,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	18567446	18569155	chr20:18567446-18569155	1	+	18567478	18568739	789624	2	150,520,	0,1189,
#Partially deleted in new
chr20	18567452	18744216	chr20:18567452-18744216	3	+	18567478	18744216	789624	5	144,91,236,107,117,	0,26278,28553,60674,176647,
#Partially deleted in new
chr20	18587892	18763917	chr20:18587892-18763917	3	+	18588072	18744252	0	6	223,91,236,107,172,558,	0,5838,8113,40234,156207,175467,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	18587941	18766644	chr20:18587941-18766644	0	+	18588072	18620080	789624	7	174,91,236,47,107,172,3285,	0,5789,8064,32125,40185,156158,175418,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	18587963	18632684	chr20:18587963-18632684	1	+	18588072	18630545	789624	5	152,91,236,107,2304,	0,5767,8042,40163,42417,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	18592329	18592619	chr20:18592329-18592619	3	+	18592329	18592329	8553170	1	290,	0,
#Deleted in new
chr20	18611046	18611167	chr20:18611046-18611167	3	-	18611046	18611046	8553170	1	121,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	18642781	18643634	chr20:18642781-18643634	7	-	18642781	18642781	16724991	2	190,499,	0,354,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	18674394	18698709	chr20:18674394-18698709	3	-	18674394	18674394	789624	4	1220,165,49,261,	0,4420,17573,24054,
#Partially deleted in new
chr20	18782423	18783690	chr20:18782423-18783690	7	-	18782423	18782423	16724991	1	1267,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	18786064	18793993	chr20:18786064-18793993	3	-	18786064	18786064	789624	3	2834,136,329,	0,3509,7600,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	18788546	18794335	chr20:18788546-18794335	0	-	18788546	18788546	789624	4	291,136,139,168,	0,1027,5118,5621,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	18788663	18794289	chr20:18788663-18794289	1	-	18788663	18788663	8553170	5	174,136,392,139,122,	0,910,3078,5001,5504,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	18794528	18796067	chr20:18794528-18796067	3	+	18794528	18794528	5263520	1	1539,	0,
#Partially deleted in new
chr20	18809727	18811716	chr20:18809727-18811716	0	-	18809727	18809727	8553170	2	388,132,	0,1857,
#Partially deleted in new
chr20	18809727	18830153	chr20:18809727-18830153	3	-	18809727	18809727	8553170	3	388,83,135,	0,15538,20291,
#Deleted in new
chr20	18813725	18814392	chr20:18813725-18814392	3	+	18813815	18814286	789624	1	667,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	19000708	19056796	chr20:19000708-19056796	3	-	19000708	19000708	8553170	6	342,121,66,87,315,67,	0,6957,9742,48846,52547,56021,
#Partially deleted in new
chr20	19212645	19722937	chr20:19212645-19722937	3	+	19212842	19721140	789624	17	339,129,77,75,85,104,75,26,54,134,161,262,167,115,113,66,1947,	0,68313,302842,367354,372325,372795,441416,453218,460955,469212,471530,472454,480613,484151,485922,504882,508345,
#Partially deleted in new
chr20	19212842	19722899	chr20:19212842-19722899	1	+	19212842	19721140	789624	18	142,125,4,77,75,85,104,75,26,54,134,161,262,167,115,113,66,1909,	0,68116,142295,302645,367157,372128,372598,441219,453021,460758,469015,471333,472257,480416,483954,485725,504685,508148,
#Deleted in new
chr20	19212851	19213477	chr20:19212851-19213477	3	-	19212851	19212851	8553170	2	117,249,	0,377,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	19242301	19284596	chr20:19242301-19284596	3	-	19242301	19242301	5263520	8	273,412,67,165,76,267,77,452,	0,1575,15327,19407,21776,23431,40837,41843,
#Partially deleted in new
chr20	19693208	19696770	chr20:19693208-19696770	0	-	19693208	19693208	8553170	2	254,155,	0,3407,
#Partially deleted in new
chr20	19693211	19696769	chr20:19693211-19696769	0	-	19693211	19693211	8553170	2	251,226,	0,3332,
#Partially deleted in new
chr20	19693266	19696794	chr20:19693266-19696794	0	-	19693266	19693266	8553170	2	196,477,	0,3051,
#Partially deleted in new
chr20	19693266	19696727	chr20:19693266-19696727	1	-	19693266	19693266	8553170	4	196,240,81,184,	0,1418,2169,3277,
#Deleted in new
chr20	19693291	19695693	chr20:19693291-19695693	0	-	19693291	19693291	8553170	3	171,240,258,	0,1393,2144,
#Deleted in new
chr20	19693291	19694685	chr20:19693291-19694685	1	-	19693291	19693291	8553170	2	171,1083,	0,311,
#Deleted in new
chr20	19693291	19694207	chr20:19693291-19694207	0	-	19693291	19693291	8553170	2	171,656,	0,260,
#Partially deleted in new
chr20	19693291	19697576	chr20:19693291-19697576	2	-	19693291	19693291	8553170	2	171,102,	0,4183,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	19756389	19758037	chr20:19756389-19758037	3	-	19756389	19756389	8553170	1	1648,	0,
#Partially deleted in new
chr20	19757605	19890334	chr20:19757605-19890334	0	+	19757605	19757605	8553170	4	334,126,76,769,	0,42016,57617,131960,
#Partially deleted in new
chr20	19757662	19890330	chr20:19757662-19890330	0	+	19757662	19757662	8553170	4	277,126,214,765,	0,41959,113419,131903,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	19757707	19872284	chr20:19757707-19872284	0	+	19757707	19757707	8553170	4	232,126,72,1203,	0,41914,113136,113374,
#Partially deleted in new
chr20	19758147	19809282	chr20:19758147-19809282	0	+	19758147	19758147	8553170	3	180,126,109,	0,41474,51026,
#Partially deleted in new
chr20	19799572	19809675	chr20:19799572-19809675	0	+	19799572	19799572	8553170	2	175,502,	0,9601,
#Deleted in new
chr20	19823442	19823943	chr20:19823442-19823943	7	-	19823442	19823442	16724991	1	501,	0,
#Partially deleted in new
chr20	19886520	20002459	chr20:19886520-20002459	3	+	19886669	20000936	789624	12	260,93,101,193,112,73,92,1134,306,132,164,1847,	0,3045,48578,70094,74179,78431,84317,88133,103485,105647,110158,114092,
#Partially deleted in new
chr20	19886520	20002457	chr20:19886520-20002457	1	+	19889601	20000936	789624	12	260,93,101,193,112,73,92,1134,306,132,164,1845,	0,3045,48578,70094,74179,78431,84317,88133,103485,105647,110158,114092,
#Partially deleted in new
chr20	19889374	19956807	chr20:19889374-19956807	0	+	19889374	19889374	8553170	4	50,93,101,193,	0,191,45724,67240,
#Partially deleted in new
chr20	19889386	19970929	chr20:19889386-19970929	0	+	19889386	19889386	8553170	8	38,93,101,169,193,112,73,92,	0,179,45712,46052,67228,71313,75565,81451,
#Partially deleted in new
chr20	19889409	19935550	chr20:19889409-19935550	0	+	19889409	19889409	8553170	3	249,101,112,	0,45689,46029,
#Partially deleted in new
chr20	19889565	20001348	chr20:19889565-20001348	1	+	19889601	20000936	789624	8	93,101,193,112,306,132,164,736,	0,45533,67049,71134,100440,102602,107113,111047,
#Partially deleted in new
chr20	19889565	19895947	chr20:19889565-19895947	0	+	19889565	19889565	8553170	2	93,188,	0,6194,
#Partially deleted in new
chr20	19935124	20002457	chr20:19935124-20002457	0	+	19935124	19935124	8553170	9	75,193,112,92,1134,306,132,164,1845,	0,21490,25575,35713,39529,54881,57043,61554,65488,
#Partially deleted in new
chr20	20017115	20033629	chr20:20017115-20033629	3	+	20017396	20033187	789624	6	334,25,91,136,146,528,	0,5340,8561,9668,15392,15986,
#Partially deleted in new
chr20	20017309	20033629	chr20:20017309-20033629	1	+	20017396	20033132	789624	5	140,25,91,136,528,	0,5146,8367,9474,15792,
#Partially deleted in new
chr20	20017309	20033629	chr20:20017309-20033629	0	+	20017309	20017309	8553170	7	140,156,25,91,136,146,528,	0,1052,5146,8367,9474,15198,15792,
#Partially deleted in new
chr20	20017347	20033629	chr20:20017347-20033629	0	+	20017347	20017347	8553170	6	102,25,99,136,146,528,	0,5108,8321,9436,15160,15754,
#Partially deleted in new
chr20	20017358	20033629	chr20:20017358-20033629	0	+	20017358	20017358	8553170	5	91,99,136,146,528,	0,8310,9425,15149,15743,
#Partially deleted in new
chr20	20017389	20033655	chr20:20017389-20033655	1	+	20018024	20033187	789624	6	652,25,91,136,146,554,	0,5066,8287,9394,15118,15712,
#Partially deleted in new
chr20	20017800	20022655	chr20:20017800-20022655	0	+	20017800	20017800	8553170	2	400,200,	0,4655,
#Partially deleted in new
chr20	20034367	20056046	chr20:20034367-20056046	1	-	20036194	20056014	789624	15	1995,249,102,240,81,60,192,171,179,167,159,92,153,431,99,	0,2955,3981,5241,6318,7198,7957,9124,10940,13397,13975,14972,16102,17924,21580,
#Partially deleted in new
chr20	20034367	20056046	chr20:20034367-20056046	3	-	20036194	20056014	0	15	1995,249,102,240,81,60,192,171,179,167,159,92,153,467,99,	0,2955,3981,5241,6318,7198,7957,9124,10940,13397,13975,14972,16102,17924,21580,
#Partially deleted in new
chr20	20034367	20056046	chr20:20034367-20056046	0	-	20050618	20056014	789624	15	1995,249,102,240,81,60,192,171,179,167,159,92,153,244,99,	0,2955,3981,5241,6318,7198,7957,9124,10940,13397,13975,14972,16102,18111,21580,
#Partially deleted in new
chr20	20034367	20056046	chr20:20034367-20056046	0	-	20050618	20056014	0	15	1995,249,102,240,81,60,192,171,179,167,159,92,153,154,99,	0,2955,3981,5241,6318,7198,7957,9124,10940,13397,13975,14972,16102,18107,21580,
#Partially deleted in new
chr20	20034373	20052466	chr20:20034373-20052466	1	-	20036194	20052342	0	14	1989,249,102,240,81,60,192,171,179,167,159,92,153,175,	0,2949,3975,5235,6312,7192,7951,9118,10934,13391,13969,14966,16096,17918,
#Partially deleted in new
chr20	20036005	20038452	chr20:20036005-20038452	0	-	20036005	20036005	8553170	3	357,212,104,	0,1317,2343,
#Partially deleted in new
chr20	20036141	20038611	chr20:20036141-20038611	0	-	20036141	20036141	8553170	3	221,249,263,	0,1181,2207,
#Partially deleted in new
chr20	20052513	20166441	chr20:20052513-20166441	0	+	20052586	20166441	789624	11	78,151,77,68,127,133,160,92,75,179,45,	0,18340,21788,22675,22975,38330,46141,90343,106856,111536,113883,
#Partially deleted in new
chr20	20052551	20360702	chr20:20052551-20360702	3	+	20056653	20360410	789624	27	40,179,151,77,68,127,133,160,92,75,179,40,140,127,78,207,135,128,99,169,175,293,328,92,206,91,493,	0,4066,18302,21750,22637,22937,38292,46103,90305,106818,111498,113845,116769,135378,138790,144018,147216,175697,193565,199043,210404,224614,236057,237748,245629,289279,307658,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	20052551	20172336	chr20:20052551-20172336	1	+	20056653	20171808	789624	14	40,179,151,77,68,127,133,160,92,75,179,40,140,556,	0,4066,18302,21750,22637,22937,38292,46103,90305,106818,111498,113845,116769,119229,
#Partially deleted in new
chr20	20052557	20075616	chr20:20052557-20075616	0	+	20056653	20075616	789624	6	104,151,151,77,68,128,	0,4088,18296,21744,22631,22931,
#Partially deleted in new
chr20	20052557	20074378	chr20:20052557-20074378	0	+	20056653	20069769	789624	5	34,151,157,151,77,	0,4088,17187,18296,21744,
#Partially deleted in new
chr20	20052578	20075224	chr20:20052578-20075224	0	+	20056653	20075224	789624	5	154,151,151,77,36,	0,4067,18275,21723,22610,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	20056645	20172333	chr20:20056645-20172333	1	+	20056653	20171808	789624	13	151,151,77,68,127,133,160,92,75,179,40,140,553,	0,14208,17656,18543,18843,34198,42009,86211,102724,107404,109751,112675,115135,
#Partially deleted in new
chr20	20073891	20098749	chr20:20073891-20098749	0	+	20074319	20098749	789624	6	42,77,68,127,133,95,	0,410,1297,1597,16952,24763,
#Partially deleted in new
chr20	20094400	20095684	chr20:20094400-20095684	3	-	20094400	20094400	8553170	2	335,98,	0,1186,
#Partially deleted in new
chr20	20169378	20228447	chr20:20169378-20228447	0	+	20169378	20228380	789624	5	82,127,207,135,199,	0,18551,27191,30389,58870,
#Partially deleted in new
chr20	20184560	20196714	chr20:20184560-20196714	0	+	20184560	20184560	8553170	4	70,127,78,145,	0,3369,6781,12009,
#Partially deleted in new
chr20	20196652	20251763	chr20:20196652-20251763	0	+	20196652	20196652	8553170	4	124,128,99,169,	0,31596,49464,54942,
#Partially deleted in new
chr20	20196652	20251763	chr20:20196652-20251763	0	+	20196652	20196652	8553170	4	124,135,128,169,	0,3115,31596,54942,
#Deleted in new
chr20	20214298	20215262	chr20:20214298-20215262	3	-	20214298	20214298	8553170	2	80,202,	0,762,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	20220128	20225322	chr20:20220128-20225322	0	+	20220128	20220128	8553170	4	124,174,277,34,	0,932,1603,5160,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	20221939	20265833	chr20:20221939-20265833	1	+	20228248	20265446	789624	6	69,128,99,169,175,419,	0,6309,24177,29655,41016,43475,
#Partially deleted in new
chr20	20225460	20360698	chr20:20225460-20360698	0	+	20228248	20298187	789624	10	129,128,99,169,175,293,92,206,91,489,	0,2788,20656,26134,37495,51705,64839,72720,116370,134749,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	20226086	20228614	chr20:20226086-20228614	0	+	20226086	20226086	8553170	2	105,366,	0,2162,
#Partially deleted in new
chr20	20228245	20265616	chr20:20228245-20265616	1	+	20228248	20265446	789624	5	131,99,169,175,202,	0,17871,23349,34710,37169,
#Deleted in new
chr20	20253302	20253838	chr20:20253302-20253838	7	-	20253302	20253302	16724991	1	536,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	20258406	20267809	chr20:20258406-20267809	3	-	20258406	20258406	8553170	3	153,99,316,	0,1291,9087,
#Partially deleted in new
chr20	20262970	20290357	chr20:20262970-20290357	0	+	20262970	20262970	8553170	3	160,328,58,	0,25638,27329,
#Partially deleted in new
chr20	20290301	20322814	chr20:20290301-20322814	0	+	20290301	20290301	8553170	3	90,206,168,	0,7879,32345,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	20316754	20316994	chr20:20316754-20316994	3	+	20316754	20316754	8553170	1	240,	0,
#Deleted in new
chr20	20363690	20365657	chr20:20363690-20365657	3	+	20363690	20363690	8553170	1	1967,	0,
#Deleted in new
chr20	20368120	20370949	chr20:20368120-20370949	3	+	20368267	20369800	0	1	2829,	0,
#Partially deleted in new
chr20	20389551	20639900	chr20:20389551-20639900	0	-	20393098	20639900	789624	33	3702,122,128,159,156,124,72,772,184,138,69,111,109,59,129,129,156,99,194,177,91,98,138,165,238,112,149,138,168,228,200,139,116,	0,22475,83277,105565,113799,115859,121702,122961,131365,134854,135278,136700,142135,146193,147104,157152,181906,182296,183323,193498,195313,199716,201625,212130,215623,221763,226491,229725,230911,239811,245866,247811,250233,
#Partially deleted in new
chr20	20392766	20712488	chr20:20392766-20712488	3	-	20396729	20712480	789624	40	487,40,122,128,159,156,124,72,772,184,138,69,111,109,59,129,129,156,99,194,177,91,98,138,165,238,112,149,138,168,228,200,139,116,178,44,58,53,111,114,	0,3928,19260,80062,102350,110584,112644,118487,119746,128150,131639,132063,133485,138920,142978,143889,153937,178691,179081,180108,190283,192098,196501,198410,208915,212408,218548,223276,226510,227696,236596,242651,244596,247018,247934,250739,260763,283469,287924,319608,
#Partially deleted in new
chr20	20392767	20512658	chr20:20392767-20512658	1	-	20412092	20512532	789624	10	486,40,87,34,128,159,156,124,72,146,	0,3927,19259,19347,80061,102349,110583,112643,118486,119745,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	20470932	20512600	chr20:20470932-20512600	0	-	20472803	20512600	789624	6	2024,159,156,124,72,88,	0,24184,32418,34478,40321,41580,
#Partially deleted in new
chr20	20591176	20605412	chr20:20591176-20605412	0	-	20591176	20605412	8553170	4	138,141,165,238,	0,7502,10505,13998,
#Deleted in new
chr20	20635350	20640806	chr20:20635350-20640806	0	-	20635350	20635350	8553170	4	267,139,116,106,	0,2012,4434,5350,
#Deleted in new
chr20	20659709	20659964	chr20:20659709-20659964	7	+	20659709	20659709	16724991	1	255,	0,
#Partially deleted in new
chr20	20721186	20721879	chr20:20721186-20721879	7	+	20721186	20721186	16724991	2	159,208,	0,485,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	20738432	20738731	chr20:20738432-20738731	3	-	20738432	20738432	8553170	1	299,	0,
#Partially deleted in new
chr20	20854120	20854642	chr20:20854120-20854642	7	-	20854120	20854120	16724991	1	522,	0,
#Deleted in new
chr20	20970447	20972562	chr20:20970447-20972562	3	+	20970447	20970447	8553170	2	101,411,	0,1704,
#Partially deleted in new
chr20	21087603	21106358	chr20:21087603-21106358	1	-	21087603	21087603	789624	3	427,115,88,	0,6134,18667,
#Deleted in new
chr20	21089695	21090509	chr20:21089695-21090509	3	+	21089695	21089695	8553170	2	202,368,	0,446,
#Deleted in new
chr20	21089734	21090437	chr20:21089734-21090437	0	+	21089734	21089734	8553170	2	163,396,	0,307,
#Partially deleted in new
chr20	21092808	21101559	chr20:21092808-21101559	3	-	21092808	21092808	8553170	2	1044,176,	0,8575,
#Partially deleted in new
chr20	21093557	21106334	chr20:21093557-21106334	0	-	21093557	21093557	8553170	2	295,64,	0,12713,
#Deleted in new
chr20	21114722	21115197	chr20:21114722-21115197	7	+	21114722	21114722	16724991	1	475,	0,
#Partially deleted in new
chr20	21125982	21246618	chr20:21125982-21246618	1	+	21126036	21246576	789624	11	222,90,637,310,94,166,66,105,97,44,140,	0,19582,35888,36867,79508,88552,89600,103028,106751,118262,120496,
#Partially deleted in new
chr20	21126006	21246622	chr20:21126006-21246622	1	+	21132153	21246576	789624	12	198,63,90,637,310,94,166,66,105,97,44,144,	0,6090,19558,35864,36843,79484,88528,89576,103004,106727,118238,120472,
#Partially deleted in new
chr20	21126013	21136449	chr20:21126013-21136449	0	+	21126115	21132099	789624	4	191,94,63,60,	0,5850,6083,10376,
#Partially deleted in new
chr20	21126037	21133179	chr20:21126037-21133179	0	+	21126037	21126037	8553170	3	167,63,220,	0,6059,6922,
#Partially deleted in new
chr20	21126038	21246618	chr20:21126038-21246618	0	+	21126038	21246576	789624	11	166,90,637,310,94,166,66,105,97,44,140,	0,19526,35832,36811,79452,88496,89544,102972,106695,118206,120440,
#Partially deleted in new
chr20	21126051	21246618	chr20:21126051-21246618	1	+	21132153	21246576	789624	11	153,63,637,310,94,166,66,105,97,44,140,	0,6045,35819,36798,79439,88483,89531,102959,106682,118193,120427,
#Partially deleted in new
chr20	21126053	21246622	chr20:21126053-21246622	3	+	21126115	21246576	789624	13	151,63,163,90,637,310,94,166,66,105,97,44,144,	0,6043,10336,19511,35817,36796,79437,88481,89529,102957,106680,118191,120425,
#Partially deleted in new
chr20	21126059	21145655	chr20:21126059-21145655	0	+	21126059	21126059	8553170	5	145,63,163,96,91,	0,6037,10330,18037,19505,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	21138955	21139074	chr20:21138955-21139074	7	-	21138955	21138955	16724991	1	119,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	21145585	21246622	chr20:21145585-21246622	0	+	21145585	21244332	789624	8	69,637,310,94,166,105,97,2378,	0,16285,17264,59905,68949,83425,87148,98659,
#Partially deleted in new
chr20	21145588	21246622	chr20:21145588-21246622	0	+	21145588	21246576	789624	9	66,637,310,94,166,105,97,44,144,	0,16282,17261,59902,68946,83422,87145,98656,100890,
#Partially deleted in new
chr20	21148740	21158741	chr20:21148740-21158741	1	-	21148740	21148740	8553170	6	169,180,128,72,123,123,	0,2105,2590,5377,9663,9878,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	21154022	21218265	chr20:21154022-21218265	3	-	21154022	21154022	8553170	7	172,55,91,4762,59,112,119,	0,6871,8773,40020,48291,59888,64124,
#Partially deleted in new
chr20	21162082	21246622	chr20:21162082-21246622	0	+	21162082	21246576	789624	9	425,310,40,166,66,105,97,44,144,	0,767,43408,52452,53500,66928,70651,82162,84396,
#Partially deleted in new
chr20	21166205	21166596	chr20:21166205-21166596	7	-	21166205	21166205	16724991	1	391,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	21194403	21218289	chr20:21194403-21218289	1	-	21194403	21194403	789624	8	552,81,120,37,59,57,112,143,	0,1034,1568,3136,7910,19132,19507,23743,
#Partially deleted in new
chr20	21197461	21218289	chr20:21197461-21218289	0	-	21197461	21197461	8553170	6	115,76,59,57,112,143,	0,1267,4852,16074,16449,20685,
#Partially deleted in new
chr20	21218458	21244354	chr20:21218458-21244354	0	+	21218458	21218458	8553170	4	134,187,105,110,	0,7650,10552,25786,
#Partially deleted in new
chr20	21218463	21246620	chr20:21218463-21246620	0	+	21218463	21218463	8553170	5	129,105,97,44,142,	0,10547,14270,25781,28015,
#Partially deleted in new
chr20	21226139	21232914	chr20:21226139-21232914	0	+	21226139	21226139	8553170	3	156,105,181,	0,2871,6594,
#Partially deleted in new
chr20	21244470	21246618	chr20:21244470-21246618	0	+	21244470	21244470	8553170	2	50,140,	0,2008,
#Deleted in new
chr20	21265853	21266465	chr20:21265853-21266465	7	+	21265853	21265853	16724991	1	612,	0,
#Deleted in new
chr20	21302730	21303704	chr20:21302730-21303704	3	-	21302730	21302730	8553170	1	974,	0,
#Partially deleted in new
chr20	21303303	21389827	chr20:21303303-21389827	3	+	21303398	21389338	789624	30	170,128,112,112,59,90,73,51,158,75,134,58,108,45,132,119,136,108,90,73,84,98,80,57,69,132,128,64,139,555,	0,22975,23186,25255,27177,27312,28257,28464,28979,30240,30400,30633,30774,35740,37417,40786,43111,44842,45037,46085,51485,52776,53282,54432,62117,62269,65159,78690,83564,85969,
#Deleted in new
chr20	21395366	21398028	chr20:21395366-21398028	3	-	21395910	21397399	789624	2	1167,1071,	0,1591,
#Deleted in new
chr20	21397817	21399366	chr20:21397817-21399366	0	+	21397817	21397817	8553170	2	95,104,	0,1445,
#Deleted in new
chr20	21398892	21400391	chr20:21398892-21400391	3	+	21398892	21398892	8553170	3	56,104,360,	0,370,1139,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	21424757	21425041	chr20:21424757-21425041	3	-	21424757	21424757	8553170	1	284,	0,
#Deleted in new
chr20	21488243	21488625	chr20:21488243-21488625	7	-	21488243	21488243	16724991	1	382,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	21499260	21502934	chr20:21499260-21502934	3	-	21499260	21499260	8553170	1	3674,	0,
#Deleted in new
chr20	21501394	21501968	chr20:21501394-21501968	7	+	21501394	21501394	16724991	1	574,	0,
#Deleted in new
chr20	21511009	21514026	chr20:21511009-21514026	3	-	21511922	21513669	789624	2	1476,616,	0,2401,
#Deleted in new
chr20	21511446	21512309	chr20:21511446-21512309	3	+	21511446	21511446	8553170	2	281,357,	0,506,
#Deleted in new
chr20	21530201	21530744	chr20:21530201-21530744	3	+	21530201	21530201	8553170	2	24,425,	0,118,
#Partially deleted in new
chr20	21569975	21616325	chr20:21569975-21616325	3	+	21569975	21569975	789624	4	273,136,145,664,	0,42572,45407,45686,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	21570137	21578028	chr20:21570137-21578028	0	+	21570137	21570137	8553170	2	111,434,	0,7457,
#Partially deleted in new
chr20	21612547	21615935	chr20:21612547-21615935	0	+	21612547	21612547	8553170	3	136,145,323,	0,2835,3065,
#Partially deleted in new
chr20	21612643	21619674	chr20:21612643-21619674	1	+	21612643	21612643	8553170	4	40,145,276,479,	0,2739,2969,6552,
#Deleted in new
chr20	21614977	21615435	chr20:21614977-21615435	3	+	21614977	21614977	8553170	1	458,	0,
#Deleted in new
chr20	21705658	21715982	chr20:21705658-21715982	3	+	21705712	21714803	789624	5	340,630,143,223,1502,	0,779,2899,3563,8822,
#Deleted in new
chr20	21705658	21718486	chr20:21705658-21718486	1	+	21705712	21714562	789624	5	340,630,143,223,4016,	0,779,2899,3563,8812,
#Deleted in new
chr20	21705686	21709424	chr20:21705686-21709424	0	+	21705686	21705686	8553170	4	56,187,143,203,	0,1194,2871,3535,
#Deleted in new
chr20	21706222	21715109	chr20:21706222-21715109	1	+	21706223	21714562	789624	4	845,143,223,639,	0,2335,2999,8248,
#Deleted in new
chr20	21708269	21709277	chr20:21708269-21709277	0	+	21708269	21708269	8553170	2	431,56,	0,952,
#Deleted in new
chr20	21742302	21743077	chr20:21742302-21743077	7	-	21742302	21742302	16724991	1	775,	0,
#Deleted in new
chr20	21755269	21755350	chr20:21755269-21755350	7	+	21755269	21755269	16724991	1	81,	0,
#Partially deleted in new
chr20	21947646	21970783	chr20:21947646-21970783	3	+	21947646	21947646	8553170	2	56,513,	0,22624,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	22054089	22074654	chr20:22054089-22074654	3	+	22054089	22054089	789624	4	195,250,79,153,	0,14349,19298,20412,
#Deleted in new
chr20	22220553	22223283	chr20:22220553-22223283	3	+	22220553	22220553	8553170	3	43,91,305,	0,1017,2425,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	22263064	22282486	chr20:22263064-22282486	1	-	22263064	22263064	8553170	4	170,143,4120,133,	0,11339,13356,19289,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	22263160	22284029	chr20:22263160-22284029	1	-	22263160	22263160	8553170	5	74,139,202,319,47,	0,11247,17178,19193,20822,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	22270045	22282857	chr20:22270045-22282857	3	-	22270045	22270045	8553170	4	1456,139,319,64,	0,4362,12308,12748,
#Deleted in new
chr20	22272051	22273454	chr20:22272051-22273454	7	-	22272051	22272051	16724991	1	1403,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	22280227	22282672	chr20:22280227-22282672	1	-	22280227	22280227	789624	3	313,62,129,	0,2126,2316,
#Deleted in new
chr20	22343692	22343930	chr20:22343692-22343930	7	-	22343692	22343692	16724991	1	238,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	22371215	22420647	chr20:22371215-22420647	1	-	22371215	22371215	8553170	4	588,346,83,688,	0,4095,5090,48744,
#Partially deleted in new
chr20	22375310	22390327	chr20:22375310-22390327	0	-	22375310	22375310	8553170	3	346,83,152,	0,995,14865,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	22400350	22420643	chr20:22400350-22420643	0	-	22400350	22400350	5263520	4	761,137,84,684,	0,975,6278,19609,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	22400507	22453360	chr20:22400507-22453360	3	-	22400507	22400507	8553170	5	604,137,84,159,110,	0,818,6121,48927,52743,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	22449641	22471557	chr20:22449641-22471557	1	-	22449641	22449641	8553170	7	144,238,128,180,107,189,549,	0,3609,13008,17514,18316,18962,21367,
#Deleted in new
chr20	22560552	22578642	chr20:22560552-22578642	3	-	22560552	22560552	789624	4	4564,123,92,133,	0,6130,7241,17957,
#Deleted in new
chr20	22560552	22584261	chr20:22560552-22584261	3	-	22567849	22584260	789624	4	4564,123,92,70,	0,6130,7241,23639,
#Deleted in new
chr20	22560791	22564268	chr20:22560791-22564268	0	-	22560791	22560791	8553170	2	304,153,	0,3324,
#Deleted in new
chr20	22581004	22585455	chr20:22581004-22585455	3	-	22581849	22584260	0	3	2150,70,181,	0,3187,4270,
#Deleted in new
chr20	22581004	22584463	chr20:22581004-22584463	1	-	22581849	22584278	0	2	2150,272,	0,3187,
#Partially deleted in new
chr20	22587521	22607517	chr20:22587521-22607517	3	-	22587521	22587521	789624	3	267,220,172,	0,1670,19824,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	22668483	22685295	chr20:22668483-22685295	1	-	22668483	22668483	8553170	3	1037,160,180,	0,16261,16632,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	22676071	22684878	chr20:22676071-22684878	3	-	22676071	22676071	8553170	2	2186,134,	0,8673,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	22683159	22685344	chr20:22683159-22685344	1	-	22683159	22683159	8553170	3	734,104,229,	0,1585,1956,
#Partially deleted in new
chr20	22685390	22746107	chr20:22685390-22746107	3	+	22685390	22685390	8553170	5	497,220,100,160,150,	0,59271,59665,60056,60567,
#Partially deleted in new
chr20	22685448	22691704	chr20:22685448-22691704	1	+	22685448	22685448	8553170	2	439,755,	0,5501,
#Partially deleted in new
chr20	22732801	22734089	chr20:22732801-22734089	7	-	22732801	22732801	16724991	1	1288,	0,
#Partially deleted in new
chr20	22885669	22886068	chr20:22885669-22886068	7	-	22885669	22885669	16724991	1	399,	0,
#Partially deleted in new
chr20	22960533	22966063	chr20:22960533-22966063	7	-	22960533	22960533	16724991	4	337,668,927,111,	0,717,1747,5419,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	23010208	23030785	chr20:23010208-23030785	3	-	23010208	23010208	8553170	4	61,313,103,242,	0,375,6547,20335,
#Deleted in new
chr20	23031541	23039236	chr20:23031541-23039236	0	+	23031541	23031541	8553170	3	147,83,181,	0,6681,7514,
#Deleted in new
chr20	23035385	23036812	chr20:23035385-23036812	3	+	23035483	23036650	789624	1	1427,	0,
#Deleted in new
chr20	23037300	23039236	chr20:23037300-23039236	3	+	23037300	23037300	8553170	3	26,83,303,	0,922,1633,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	23045632	23049741	chr20:23045632-23049741	3	-	23047776	23049504	0	1	4109,	0,
#Deleted in new
chr20	23071546	23072722	chr20:23071546-23072722	3	-	23071546	23071546	8553170	1	1176,	0,
#Deleted in new
chr20	23079348	23086340	chr20:23079348-23086340	3	-	23083949	23086192	789624	2	4626,2082,	0,4910,
#Partially deleted in new
chr20	23125067	23132621	chr20:23125067-23132621	3	-	23125067	23125067	789624	4	1471,101,201,123,	0,3561,3897,7431,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	23148085	23149939	chr20:23148085-23149939	3	+	23148085	23148085	8553170	1	1854,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	23160856	23160971	chr20:23160856-23160971	7	-	23160856	23160856	16724991	1	115,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	23180175	23187544	chr20:23180175-23187544	3	+	23180175	23180175	8553170	4	72,118,151,332,	0,235,6224,7037,
#Partially deleted in new
chr20	23187960	23190305	chr20:23187960-23190305	3	+	23187960	23187960	8553170	1	2345,	0,
#Partially deleted in new
chr20	23187974	23190307	chr20:23187974-23190307	1	+	23187974	23187974	8553170	2	184,525,	0,1808,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	23320957	23325352	chr20:23320957-23325352	3	-	23320957	23320957	8553170	4	252,47,84,48,	0,1361,4045,4347,
#Partially deleted in new
chr20	23346940	23351486	chr20:23346940-23351486	3	-	23346940	23346940	8553170	2	657,157,	0,4389,
#Partially deleted in new
chr20	23350735	23354777	chr20:23350735-23354777	3	+	23354041	23354464	0	2	326,797,	0,3245,
#Partially deleted in new
chr20	23356593	23358005	chr20:23356593-23358005	3	-	23356593	23356593	789624	3	376,87,51,	0,457,1361,
#Partially deleted in new
chr20	23356593	23357855	chr20:23356593-23357855	0	-	23356593	23356593	8553170	3	232,87,135,	0,457,1127,
#Partially deleted in new
chr20	23356794	23358116	chr20:23356794-23358116	1	-	23356794	23356794	8553170	2	343,162,	0,1160,
#Deleted in new
chr20	23362181	23373063	chr20:23362181-23373063	3	+	23364383	23370441	789624	6	56,1385,95,168,158,2973,	0,2181,4821,6580,7402,7909,
#Deleted in new
chr20	23362319	23364529	chr20:23362319-23364529	0	+	23364383	23364529	789624	3	531,97,167,	0,901,2043,
#Deleted in new
chr20	23364383	23373045	chr20:23364383-23373045	1	+	23364383	23370441	789624	5	1364,95,168,158,2955,	0,2619,4378,5200,5707,
#Deleted in new
chr20	23365218	23368907	chr20:23365218-23368907	0	+	23365218	23365218	8553170	2	529,146,	0,3543,
#Deleted in new
chr20	23368870	23370421	chr20:23368870-23370421	0	+	23368870	23368870	8553170	2	59,331,	0,1220,
#Partially deleted in new
chr20	23374518	23421519	chr20:23374518-23421519	1	-	23377375	23397131	789624	10	2968,51,69,105,85,56,78,117,80,215,	0,4926,5348,6694,15427,15690,20403,22553,28474,46786,
#Partially deleted in new
chr20	23374518	23421519	chr20:23374518-23421519	1	-	23377375	23421402	789624	10	2968,51,69,105,85,56,78,47,80,215,	0,4926,5348,6694,15427,15690,20403,20620,28474,46786,
#Partially deleted in new
chr20	23374518	23421519	chr20:23374518-23421519	1	-	23377375	23421402	789624	11	2968,51,69,105,85,56,78,47,129,80,215,	0,4926,5348,6694,15427,15690,20403,20620,22553,28474,46786,
#Partially deleted in new
chr20	23374521	23421488	chr20:23374521-23421488	3	-	23377375	23421402	789624	11	2965,51,69,105,85,56,78,47,117,80,184,	0,4923,5345,6691,15424,15687,20400,20617,22550,28471,46783,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	23378798	23421414	chr20:23378798-23421414	0	-	23378798	23378798	8553170	7	1137,105,85,56,78,80,110,	0,2414,11147,11410,16123,24194,42506,
#Partially deleted in new
chr20	23379471	23421472	chr20:23379471-23421472	0	-	23379471	23379471	8553170	9	24,69,105,85,56,78,117,80,168,	0,395,1741,10474,10737,15450,17600,23521,41833,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	23380895	23381012	chr20:23380895-23381012	7	-	23380895	23380895	16724991	1	117,	0,
#Partially deleted in new
chr20	23396737	23421472	chr20:23396737-23421472	0	-	23396737	23396737	8553170	3	451,80,168,	0,6255,24567,
#Partially deleted in new
chr20	23439684	23444930	chr20:23439684-23444930	3	+	23440267	23444878	789624	4	122,343,111,160,	0,459,4249,5086,
#Deleted in new
chr20	23439684	23440637	chr20:23439684-23440637	1	+	23440387	23440637	789624	3	122,343,12,	0,459,941,
#Partially deleted in new
chr20	23440247	23444930	chr20:23440247-23444930	1	+	23440267	23444878	789624	3	239,111,160,	0,3686,4523,
#Deleted in new
chr20	23450402	23452857	chr20:23450402-23452857	1	-	23450505	23452811	789624	2	187,274,	0,2181,
#Deleted in new
chr20	23450402	23452845	chr20:23450402-23452845	3	-	23450505	23452811	789624	3	187,105,262,	0,1413,2181,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	23457583	23457685	chr20:23457583-23457685	3	-	23457583	23457583	8553170	1	102,	0,
#Deleted in new
chr20	23458528	23459459	chr20:23458528-23459459	3	+	23458528	23458528	8553170	2	137,393,	0,538,
#Partially deleted in new
chr20	23475699	23479798	chr20:23475699-23479798	7	+	23475699	23475699	16724991	3	188,105,69,	0,2940,4030,
#Partially deleted in new
chr20	23481644	23519054	chr20:23481644-23519054	3	-	23481644	23481644	8553170	2	119,438,	0,36972,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	23489415	23489973	chr20:23489415-23489973	3	-	23489415	23489415	8553170	1	558,	0,
#Deleted in new
chr20	23491100	23495889	chr20:23491100-23495889	0	+	23491667	23495889	789624	4	83,374,114,59,	0,424,1857,4730,
#Deleted in new
chr20	23491128	23496018	chr20:23491128-23496018	3	+	23491667	23495914	789624	4	214,374,114,188,	0,396,1829,4702,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	23516883	23519031	chr20:23516883-23519031	1	-	23516883	23516883	8553170	1	2148,	0,
#Partially deleted in new
chr20	23519145	23542018	chr20:23519145-23542018	7	+	23519145	23519145	16724991	4	339,362,111,345,	0,1601,15052,22528,
#Partially deleted in new
chr20	23519147	23542018	chr20:23519147-23542018	5	+	23519147	23519147	16724991	4	337,359,111,345,	0,1602,15050,22526,
#Partially deleted in new
chr20	23520875	23541757	chr20:23520875-23541757	5	+	23520875	23520875	16724991	3	233,111,84,	0,13322,20798,
#Deleted in new
chr20	23547763	23550652	chr20:23547763-23550652	7	-	23547763	23547763	16724991	3	90,114,240,	0,1038,2649,
#Partially deleted in new
chr20	23564731	23568749	chr20:23564731-23568749	3	-	23564947	23568450	789624	3	306,114,539,	0,1242,3479,
#Deleted in new
chr20	23583644	23586510	chr20:23583644-23586510	7	+	23583644	23583644	16724991	3	116,114,90,	0,1699,2776,
#Deleted in new
chr20	23602409	23605876	chr20:23602409-23605876	3	-	23603509	23605864	789624	2	1325,267,	0,3200,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	23626705	23637945	chr20:23626705-23637945	3	-	23633915	23637862	0	4	2760,86,114,326,	0,7208,8548,10914,
#Deleted in new
chr20	23631825	23632316	chr20:23631825-23632316	3	-	23631825	23631825	8553170	1	491,	0,
#Deleted in new
chr20	23633647	23638026	chr20:23633647-23638026	1	-	23633915	23637862	0	3	352,114,407,	0,1606,3972,
#Deleted in new
chr20	23633656	23638473	chr20:23633656-23638473	1	-	23633915	23637862	0	4	343,114,313,62,	0,1597,3963,4755,
#Deleted in new
chr20	23655224	23656390	chr20:23655224-23656390	3	-	23655224	23655224	8553170	2	370,66,	0,1100,
#Deleted in new
chr20	23685639	23689040	chr20:23685639-23689040	3	-	23685893	23688969	789624	3	338,114,299,	0,1448,3102,
#Partially deleted in new
chr20	23711319	23711406	chr20:23711319-23711406	7	-	23711319	23711319	16724991	1	87,	0,
#Partially deleted in new
chr20	23747552	23750937	chr20:23747552-23750937	1	-	23747815	23750866	789624	3	347,114,299,	0,1463,3086,
#Partially deleted in new
chr20	23747730	23751268	chr20:23747730-23751268	3	-	23747815	23750866	789624	4	169,114,260,112,	0,1285,2908,3426,
#Deleted in new
chr20	23772784	23776169	chr20:23772784-23776169	7	-	23772784	23772784	16724991	3	75,97,226,	0,1290,3159,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	23798140	23805663	chr20:23798140-23805663	3	+	23798140	23798140	8553170	4	147,98,122,430,	0,5598,6382,7093,
#Partially deleted in new
chr20	23823768	23826731	chr20:23823768-23826731	3	-	23824019	23826660	789624	3	335,114,299,	0,1441,2664,
#Partially deleted in new
chr20	23875934	23879750	chr20:23875934-23879750	3	-	23876187	23879676	0	3	337,114,305,	0,1570,3511,
#Deleted in new
chr20	23918770	23922169	chr20:23918770-23922169	7	-	23918770	23918770	16724991	3	84,113,222,	0,1293,3177,
#Deleted in new
chr20	23980584	23980734	chr20:23980584-23980734	7	-	23980584	23980584	16724991	1	150,	0,
#Deleted in new
chr20	23985049	23986795	chr20:23985049-23986795	1	-	23985215	23986611	789624	5	313,114,113,128,360,	0,617,812,1026,1386,
#Deleted in new
chr20	23985052	23986875	chr20:23985052-23986875	1	-	23985215	23986611	789624	6	310,114,113,128,210,99,	0,614,809,1023,1383,1724,
#Partially deleted in new
chr20	23985052	23988779	chr20:23985052-23988779	3	-	23985215	23986611	789624	6	310,114,113,128,210,171,	0,614,809,1023,1383,3556,
#Deleted in new
chr20	23989291	23990454	chr20:23989291-23990454	7	+	23989291	23989291	16724991	1	1163,	0,
#Deleted in new
chr20	24142589	24144386	chr20:24142589-24144386	3	-	24142589	24142589	8553170	2	377,157,	0,1640,
#Partially deleted in new
chr20	24237254	24237398	chr20:24237254-24237398	3	+	24237254	24237254	8553170	1	144,	0,
#Partially deleted in new
chr20	24297584	24318086	chr20:24297584-24318086	3	-	24297584	24297584	8553170	5	182,146,89,69,116,	0,687,17085,19554,20386,
#Deleted in new
chr20	24445390	24446314	chr20:24445390-24446314	7	+	24445390	24445390	16724991	1	924,	0,
#Partially deleted in new
chr20	24469198	24666616	chr20:24469198-24666616	3	+	24543097	24665504	789624	4	555,558,138,1271,	0,73821,115657,196147,
#Partially deleted in new
chr20	24491471	24502345	chr20:24491471-24502345	3	-	24491471	24491471	8553170	3	267,379,177,	0,3949,10697,
#Partially deleted in new
chr20	24584901	24597153	chr20:24584901-24597153	0	+	24584901	24584901	8553170	2	92,325,	0,11927,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	24679546	24680991	chr20:24679546-24680991	3	+	24679546	24679546	8553170	2	118,687,	0,758,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	24931839	24932983	chr20:24931839-24932983	3	+	24931839	24931839	8553170	1	1144,	0,
#Partially deleted in new
chr20	24949229	24959928	chr20:24949229-24959928	3	+	24949505	24959712	0	4	346,173,117,294,	0,8057,9698,10405,
#Partially deleted in new
chr20	24962924	24992979	chr20:24962924-24992979	3	-	24963812	24992688	789624	9	1098,193,135,175,117,93,116,117,386,	0,5967,6601,7272,8535,10720,15842,20978,29669,
#Partially deleted in new
chr20	24962924	24992642	chr20:24962924-24992642	0	-	24963812	24992642	789624	10	1098,24,193,135,175,117,93,116,117,49,	0,1450,5967,6601,7272,8535,10720,15842,20978,29669,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	24974170	24974280	chr20:24974170-24974280	3	+	24974170	24974170	8553170	1	110,	0,
#Partially deleted in new
chr20	25006229	25058182	chr20:25006229-25058182	3	-	25006859	25058102	0	12	696,83,127,113,93,138,148,153,176,200,97,414,	0,6627,7306,7731,8908,13780,15159,16710,17236,24529,41855,51539,
#Partially deleted in new
chr20	25006229	25032706	chr20:25006229-25032706	1	-	25007761	25032436	0	13	1712,119,64,128,127,113,93,138,148,153,176,200,338,	0,3040,6371,6582,7306,7731,8908,13780,15159,16710,17236,24529,26139,
#Partially deleted in new
chr20	25006231	25058182	chr20:25006231-25058182	1	-	25007761	25058102	0	14	1710,119,64,128,127,113,93,138,148,153,176,200,97,414,	0,3038,6369,6580,7304,7729,8906,13778,15157,16708,17234,24527,41853,51537,
#Deleted in new
chr20	25006231	25012326	chr20:25006231-25012326	0	-	25006231	25006231	8553170	2	1710,3057,	0,3038,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	25045937	25058980	chr20:25045937-25058980	1	-	25046841	25058102	789624	3	935,97,1212,	0,2147,11831,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	25062961	25063591	chr20:25062961-25063591	3	-	25062961	25062961	8553170	1	630,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	25070884	25082131	chr20:25070884-25082131	1	-	25071920	25082096	789624	5	1134,181,124,79,459,	0,6800,7944,8551,10788,
#Partially deleted in new
chr20	25071483	25082131	chr20:25071483-25082131	0	-	25072608	25082096	789624	6	535,108,181,124,79,459,	0,1052,6201,7345,7952,10189,
#Partially deleted in new
chr20	25071483	25082131	chr20:25071483-25082131	0	-	25072613	25082096	789624	5	535,108,124,79,459,	0,1052,7345,7952,10189,
#Partially deleted in new
chr20	25071483	25082131	chr20:25071483-25082131	1	-	25071934	25082096	789624	4	535,124,79,459,	0,7345,7952,10189,
#Partially deleted in new
chr20	25075435	25082365	chr20:25075435-25082365	3	-	25076260	25082096	789624	5	1115,181,124,79,693,	0,2249,3393,4000,6237,
#Deleted in new
chr20	25076307	25077999	chr20:25076307-25077999	0	-	25076307	25076307	8553170	2	243,315,	0,1377,
#Partially deleted in new
chr20	25078547	25082131	chr20:25078547-25082131	1	-	25078735	25082096	789624	3	405,79,459,	0,888,3125,
#Deleted in new
chr20	25099104	25099928	chr20:25099104-25099928	7	+	25099104	25099104	16724991	1	824,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	25140788	25148790	chr20:25140788-25148790	3	-	25140788	25140788	5263520	4	2043,146,145,834,	0,2579,3490,7168,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	25143239	25149258	chr20:25143239-25149258	0	-	25143239	25143239	8553170	3	274,127,67,	0,1057,5952,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	25143364	25147464	chr20:25143364-25147464	0	-	25143364	25143364	8553170	3	149,127,16,	0,932,4084,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	25143364	25149240	chr20:25143364-25149240	0	-	25143364	25143364	8553170	3	149,145,49,	0,914,5827,
#Deleted in new
chr20	25161166	25162061	chr20:25161166-25162061	7	-	25161166	25161166	16724991	1	895,	0,
#Partially deleted in new
chr20	25195692	25226729	chr20:25195692-25226729	1	+	25195864	25225597	789624	14	175,322,77,144,76,36,89,80,65,102,141,57,113,1231,	0,11383,14156,17570,19174,19983,20955,21809,22857,25539,27145,28408,29512,29806,
#Partially deleted in new
chr20	25195700	25226729	chr20:25195700-25226729	1	+	25206536	25225597	789624	15	167,69,319,77,144,76,36,89,80,65,102,141,57,113,1231,	0,10821,11378,14148,17562,19166,19975,20947,21801,22849,25531,27137,28400,29504,29798,
#Partially deleted in new
chr20	25195719	25226729	chr20:25195719-25226729	3	+	25206536	25225597	789624	15	148,69,322,77,144,76,36,89,80,65,102,141,57,113,1231,	0,10802,11356,14129,17543,19147,19956,20928,21782,22830,25512,27118,28381,29485,29779,
#Partially deleted in new
chr20	25195725	25218614	chr20:25195725-25218614	0	+	25195864	25218614	789624	9	142,319,77,144,76,36,89,80,65,	0,11353,14123,17537,19141,19950,20922,21776,22824,
#Partially deleted in new
chr20	25195729	25222970	chr20:25195729-25222970	0	+	25195729	25222970	789624	10	138,77,144,76,36,89,80,65,102,133,	0,14119,17533,19137,19946,20918,21772,22820,25502,27108,
#Partially deleted in new
chr20	25195735	25217581	chr20:25195735-25217581	0	+	25195864	25217581	789624	7	132,319,77,76,36,89,80,	0,11343,14113,19131,19940,20912,21766,
#Partially deleted in new
chr20	25195756	25226729	chr20:25195756-25226729	1	+	25206536	25225515	789624	14	111,69,322,77,144,76,36,89,80,65,141,57,156,1231,	0,10765,11319,14092,17506,19110,19919,20891,21745,22793,27081,28344,29405,29742,
#Partially deleted in new
chr20	25195774	25217581	chr20:25195774-25217581	0	+	25195774	25217581	789624	6	93,77,76,36,89,80,	0,14074,19092,19901,20873,21727,
#Partially deleted in new
chr20	25195791	25213376	chr20:25195791-25213376	0	+	25206536	25213376	789624	7	76,101,122,69,319,77,114,	0,362,1313,10730,11287,14057,17471,
#Partially deleted in new
chr20	25195792	25216717	chr20:25195792-25216717	0	+	25195864	25216717	789624	6	75,322,77,76,36,70,	0,11283,14056,19074,19883,20855,
#Partially deleted in new
chr20	25195838	25221333	chr20:25195838-25221333	0	+	25206536	25221333	789624	10	29,69,322,77,76,36,89,80,65,102,	0,10683,11237,14010,19028,19837,20809,21663,22711,25393,
#Partially deleted in new
chr20	25207343	25225317	chr20:25207343-25225317	0	+	25207343	25225317	789624	11	54,77,144,76,36,89,80,65,141,57,113,	0,2505,5919,7523,8332,9304,10158,11206,15494,16757,17861,
#Partially deleted in new
chr20	25213339	25226729	chr20:25213339-25226729	0	+	25213339	25225515	789624	11	67,76,36,89,80,65,102,141,57,156,1231,	0,1527,2336,3308,4162,5210,7892,9498,10761,11822,12159,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	25214697	25214798	chr20:25214697-25214798	3	+	25214697	25214697	8553170	1	101,	0,
#Partially deleted in new
chr20	25215697	25224702	chr20:25215697-25224702	0	+	25215697	25215697	8553170	6	14,89,80,65,141,602,	0,950,1804,2852,7140,8403,
#Deleted in new
chr20	25221791	25226729	chr20:25221791-25226729	0	+	25221791	25221791	8553170	4	1187,57,113,1231,	0,2309,3413,3707,
#Deleted in new
chr20	25222058	25222883	chr20:25222058-25222883	0	+	25222058	25222058	8553170	2	368,46,	0,779,
#Deleted in new
chr20	25223866	25225733	chr20:25223866-25225733	0	+	25223866	25223866	8553170	3	291,113,235,	0,1338,1632,
#Deleted in new
chr20	25224630	25226729	chr20:25224630-25226729	0	+	25224630	25224630	8553170	2	687,1231,	0,868,
#Deleted in new
chr20	25226447	25226735	chr20:25226447-25226735	3	-	25226447	25226447	8553170	1	288,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	25229149	25231933	chr20:25229149-25231933	3	+	25229149	25229149	8553170	1	2784,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	25239006	25245229	chr20:25239006-25245229	3	-	25239006	25239006	8553170	2	2225,110,	0,6113,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr20	25248068	25298014	chr20:25248068-25298014	3	+	25248178	25296522	0	20	353,102,79,104,132,112,83,144,93,147,164,115,102,148,59,142,208,135,67,1645,	0,11168,21060,23314,26523,28577,29175,30250,30988,32197,32880,33964,35107,36035,40356,42412,44337,46089,47535,48301,
#Partially deleted in new
chr20	25251007	25251304	chr20:25251007-25251304	3	-	25251007	25251007	8553170	1	297,	0,
#Deleted in new
chr20	25284914	25285588	chr20:25284914-25285588	3	-	25284914	25284914	8553170	1	674,	0,
#Deleted in new
chr20	25289847	25296468	chr20:25289847-25296468	0	+	25289847	25296468	789624	6	83,142,208,135,67,99,	0,633,2558,4310,5756,6522,
#Deleted in new
chr20	25293900	25296636	chr20:25293900-25296636	0	+	25293900	25293900	8553170	3	392,67,267,	0,1703,2469,
#Partially deleted in new
chr20	25294742	25390983	chr20:25294742-25390983	1	-	25294972	25390703	789624	13	288,128,79,83,80,38,130,46,31,120,106,125,471,	0,7476,8807,12090,13223,13714,14703,20182,22305,25456,28582,44484,95770,
#Partially deleted in new
chr20	25294742	25300884	chr20:25294742-25300884	0	-	25300844	25300884	789624	2	288,186,	0,5956,
#Partially deleted in new
chr20	25300197	25390976	chr20:25300197-25390976	3	-	25300844	25390703	789624	13	687,128,79,83,80,38,130,46,31,120,106,125,464,	0,2021,3352,6635,7768,8259,9248,14727,16850,20001,23127,39029,90315,
#Partially deleted in new
chr20	25303262	25309498	chr20:25303262-25309498	0	-	25303297	25309498	789624	5	366,83,80,38,53,	0,3570,4703,5194,6183,
#Deleted in new
chr20	25306832	25310472	chr20:25306832-25310472	0	-	25306832	25306832	8553170	5	83,80,38,130,273,	0,1133,1624,2613,3367,
#Partially deleted in new
chr20	25306832	25339749	chr20:25306832-25339749	0	-	25306832	25320269	789624	10	83,80,38,130,46,31,120,106,125,55,	0,1133,1624,2613,8092,10215,13366,16492,32394,32862,
#Partially deleted in new
chr20	25308456	25390134	chr20:25308456-25390134	0	-	25308456	25320269	789624	8	38,130,46,31,120,106,125,209,	0,989,6468,8591,11742,14868,30770,81469,
#Partially deleted in new
chr20	25309498	25339731	chr20:25309498-25339731	0	-	25309498	25339677	789624	7	77,46,31,120,106,125,110,	0,5426,7549,10700,13826,29728,30123,
#Partially deleted in new
chr20	25320198	25390753	chr20:25320198-25390753	0	-	25338963	25390703	789624	5	120,106,120,125,241,	0,3126,18686,19028,70314,
#Partially deleted in new
chr20	25368274	25368766	chr20:25368274-25368766	7	-	25368274	25368274	16724991	1	492,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	25407726	25448555	chr20:25407726-25448555	3	+	25407820	25445991	0	7	169,65,99,91,117,75,2633,	0,6063,9377,10378,17484,33975,38196,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	25407730	25418195	chr20:25407730-25418195	0	+	25407730	25407730	8553170	5	165,163,65,99,91,	0,3393,6059,9373,10374,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	25413456	25417246	chr20:25413456-25417246	0	+	25413456	25413456	8553170	2	398,143,	0,3647,
#Partially deleted in new
chr20	25443023	25452628	chr20:25443023-25452628	0	+	25443023	25443023	8553170	3	92,117,187,	0,2899,9418,
#Partially deleted in new
chr20	25452704	25585517	chr20:25452704-25585517	3	-	25453450	25526587	789624	24	938,114,147,114,159,70,105,1047,284,107,133,81,111,175,141,137,171,153,191,67,173,97,191,63,	0,2968,5678,8817,9678,14684,17286,23338,26218,27456,29263,36539,37170,38646,43958,45505,48135,51247,52183,57969,60129,65048,73703,132750,
#Partially deleted in new
chr20	25452825	25585517	chr20:25452825-25585517	1	-	25453450	25526587	789624	23	817,114,147,114,159,70,105,284,107,133,81,111,175,141,137,171,153,191,67,173,97,191,63,	0,2847,5557,8696,9557,14563,17165,26097,27335,29142,36418,37049,38525,43837,45384,48014,51126,52062,57848,60008,64927,73582,132629,
#Partially deleted in new
chr20	25452836	25458976	chr20:25452836-25458976	0	-	25452836	25452836	8553170	3	806,114,594,	0,2836,5546,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	25455672	25462742	chr20:25455672-25462742	0	-	25455672	25455672	8553170	4	114,147,114,360,	0,2710,5849,6710,
#Partially deleted in new
chr20	25462382	25479027	chr20:25462382-25479027	0	-	25462382	25479027	789624	4	159,70,105,105,	0,5006,7608,16540,
#Partially deleted in new
chr20	25481837	25491525	chr20:25481837-25491525	0	-	25481837	25481837	8553170	4	263,81,111,175,	0,7406,8037,9513,
#Partially deleted in new
chr20	25488982	25496803	chr20:25488982-25496803	0	-	25488982	25488982	8553170	3	342,111,141,	0,892,7680,
#Partially deleted in new
chr20	25611152	25611223	chr20:25611152-25611223	3	+	25611152	25611152	8553170	1	71,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	25612934	25624175	chr20:25612934-25624175	3	-	25615924	25623948	0	2	3647,317,	0,10924,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	25624044	25678074	chr20:25624044-25678074	3	+	25624044	25624044	8553170	5	91,131,122,99,4223,	0,8113,10004,10684,49807,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	25624058	25677548	chr20:25624058-25677548	0	+	25624058	25624058	789624	4	77,118,156,613,	0,21472,49793,52877,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	25654594	25654881	chr20:25654594-25654881	3	-	25654594	25654594	8553170	1	287,	0,
#Deleted in new
chr20	25669856	25670386	chr20:25669856-25670386	7	-	25669856	25669856	16724991	1	530,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	25674214	25696841	chr20:25674214-25696841	3	-	25675031	25686417	789624	5	2823,96,127,76,83,	0,11352,11781,12176,22544,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	25674214	25686957	chr20:25674214-25686957	1	-	25675031	25686417	789624	4	2823,96,127,567,	0,11352,11781,12176,
#Partially deleted in new
chr20	25676948	25696815	chr20:25676948-25696815	0	-	25676948	25676948	8553170	5	89,96,254,76,57,	0,8618,9047,9442,19810,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	25680780	25681246	chr20:25680780-25681246	3	+	25680780	25680780	8553170	1	466,	0,
#Partially deleted in new
chr20	25697002	25752709	chr20:25697002-25752709	0	+	25697002	25697002	8553170	3	93,627,147,	0,37266,55560,
#Partially deleted in new
chr20	25734263	25735093	chr20:25734263-25735093	7	+	25734263	25734263	16724991	1	830,	0,
#Partially deleted in new
chr20	25751217	25752761	chr20:25751217-25752761	3	+	25751217	25751217	8553170	2	121,199,	0,1345,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	25763465	25868150	chr20:25763465-25868150	3	-	25763465	25763465	8553170	5	239,108,203,244,198,	0,1428,11644,23279,104487,
#Partially deleted in new
chr20	25774013	25775272	chr20:25774013-25775272	0	-	25774013	25774013	8553170	2	146,163,	0,1096,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	25774017	25863201	chr20:25774017-25863201	1	-	25774017	25774017	8553170	3	1295,244,142,	0,74687,89042,
#Partially deleted in new
chr20	25774230	25775270	chr20:25774230-25775270	0	-	25774230	25774230	8553170	2	227,161,	0,879,
#Partially deleted in new
chr20	25774860	25775316	chr20:25774860-25775316	0	-	25774860	25774860	8553170	1	456,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	25775022	25861577	chr20:25775022-25861577	0	-	25775022	25775022	8553170	3	314,244,175,	0,73682,86380,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	25775176	25868225	chr20:25775176-25868225	1	-	25775176	25775176	8553170	7	136,100,185,76,148,74,113,	0,6859,75523,76060,76921,92776,92936,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	25775254	25859903	chr20:25775254-25859903	0	-	25775254	25775254	8553170	4	58,100,288,164,	0,6781,11446,84485,
#Partially deleted in new
chr20	25783552	25783919	chr20:25783552-25783919	7	+	25783552	25783552	16724991	1	367,	0,
#Partially deleted in new
chr20	25835984	25836832	chr20:25835984-25836832	7	-	25835984	25835984	16724991	2	95,127,	0,721,
#Deleted in new
chr20	25845496	25845862	chr20:25845496-25845862	7	+	25845496	25845496	16724991	1	366,	0,
#Deleted in new
chr20	25867071	25868168	chr20:25867071-25868168	0	-	25867071	25867071	8553170	2	389,216,	0,881,
#Deleted in new
chr20	25919498	25919681	chr20:25919498-25919681	7	-	25919498	25919498	16724991	1	183,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	25955811	25969288	chr20:25955811-25969288	3	+	25955811	25955811	789624	4	58,125,135,4286,	0,274,7250,9191,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	26008790	26010531	chr20:26008790-26010531	3	-	26008790	26008790	8553170	2	265,277,	0,1464,
#Partially deleted in new
chr20	26018831	26020684	chr20:26018831-26020684	7	+	26018831	26018831	16724991	4	81,127,96,49,	0,244,997,1804,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	26054654	26086917	chr20:26054654-26086917	3	+	26054654	26054654	789624	5	431,288,100,227,4024,	0,14262,19115,26509,28239,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	26057397	26073859	chr20:26057397-26073859	0	+	26057397	26057397	8553170	3	205,288,90,	0,11519,16372,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	26065646	26073812	chr20:26065646-26073812	0	+	26065646	26065646	8553170	5	138,76,191,166,43,	0,915,1337,3392,8123,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	26068936	26076440	chr20:26068936-26076440	0	+	26068936	26068936	8553170	3	268,100,107,	0,4833,7397,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	26069087	26082948	chr20:26069087-26082948	0	+	26069087	26069087	8553170	3	117,203,55,	0,12100,13806,
#Deleted in new
chr20	26071987	26072351	chr20:26071987-26072351	7	-	26071987	26071987	16724991	1	364,	0,
#Partially deleted in new
chr20	26103415	26114028	chr20:26103415-26114028	7	-	26103415	26103415	16724991	2	256,150,	0,10463,
#Partially deleted in new
chr20	26103488	26113986	chr20:26103488-26113986	5	-	26103488	26103488	16724991	2	183,108,	0,10390,
#Partially deleted in new
chr20	26132886	26134198	chr20:26132886-26134198	3	-	26132886	26132886	8553170	2	111,160,	0,1152,
#Partially deleted in new
chr20	26186919	26187541	chr20:26186919-26187541	0	-	26186919	26186919	8553170	1	622,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	26187018	26209233	chr20:26187018-26209233	1	-	26187018	26187018	789624	5	819,108,100,75,111,	0,4774,5114,12430,22104,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	26187018	26208891	chr20:26187018-26208891	0	-	26187018	26187018	8553170	5	819,108,100,75,27,	0,4774,5114,12430,21846,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	26187631	26251505	chr20:26187631-26251505	0	-	26187631	26187631	8553170	4	206,104,75,243,	0,4161,11817,63631,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	26187631	26208238	chr20:26187631-26208238	0	-	26187631	26187631	8553170	6	206,69,100,147,75,94,	0,4161,4501,6666,11817,20513,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	26187631	26194762	chr20:26187631-26194762	0	-	26187631	26187631	8553170	5	206,108,100,147,213,	0,4161,4501,6666,6918,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	26187631	26209095	chr20:26187631-26209095	0	-	26187631	26187631	8553170	5	206,108,100,75,97,	0,4161,4501,11817,21367,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	26187631	26209248	chr20:26187631-26209248	0	-	26187631	26187631	8553170	5	206,108,100,75,79,	0,4161,4501,11817,21538,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	26187631	26208067	chr20:26187631-26208067	1	-	26187631	26187631	8553170	4	206,104,100,394,	0,4161,4501,20042,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	26187631	26209095	chr20:26187631-26209095	0	-	26187631	26187631	8553170	4	206,108,100,97,	0,4161,4501,21367,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	26187631	26208043	chr20:26187631-26208043	0	-	26187631	26187631	8553170	3	206,93,370,	0,4039,20042,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	26187631	26209261	chr20:26187631-26209261	0	-	26187631	26187631	8553170	6	206,108,100,147,75,115,	0,4161,4501,6666,11817,21515,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	26187631	26209462	chr20:26187631-26209462	0	-	26187631	26187631	8553170	4	206,108,100,199,	0,4161,4501,21632,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	26187631	26199525	chr20:26187631-26199525	0	-	26187631	26187631	8553170	4	449,93,100,77,	0,4039,4501,11817,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	26187631	26251492	chr20:26187631-26251492	0	-	26187631	26187631	8553170	4	206,108,100,230,	0,4161,4501,63631,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	26187634	26209222	chr20:26187634-26209222	0	-	26187634	26187634	8553170	6	203,69,100,147,75,60,	0,4158,4498,6663,11814,21528,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	26187634	26208238	chr20:26187634-26208238	2	-	26187634	26187634	8553170	4	203,108,100,94,	0,4158,4498,20510,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	26187634	26251466	chr20:26187634-26251466	1	-	26187634	26187634	8553170	6	203,108,100,147,75,204,	0,4158,4498,6663,11814,63628,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	26187634	26251526	chr20:26187634-26251526	0	-	26187634	26187634	8553170	5	203,108,100,75,264,	0,4158,4498,11814,63628,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	26187637	26209839	chr20:26187637-26209839	1	-	26187637	26187637	8553170	6	200,108,100,75,85,97,	0,4155,4495,11811,12820,22105,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	26187637	26209357	chr20:26187637-26209357	0	-	26187637	26187637	8553170	4	200,104,75,94,	0,4155,11811,21626,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	26187709	26208444	chr20:26187709-26208444	0	-	26187709	26187709	8553170	5	128,108,100,75,142,	0,4083,4423,11739,20593,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	26187709	26209189	chr20:26187709-26209189	1	-	26187709	26187709	8553170	6	128,93,104,147,75,43,	0,3961,4419,6588,11739,21437,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	26187709	26208078	chr20:26187709-26208078	0	-	26187709	26187709	8553170	5	128,108,100,75,405,	0,4083,4423,11739,19964,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	26187709	26209222	chr20:26187709-26209222	0	-	26187709	26187709	8553170	6	128,157,108,100,75,76,	0,2253,4083,4423,11739,21437,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	26187709	26209342	chr20:26187709-26209342	0	-	26187709	26187709	8553170	5	128,93,100,75,79,	0,3961,4423,11739,21554,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	26187808	26209261	chr20:26187808-26209261	0	-	26187808	26187808	8553170	6	29,108,100,59,75,115,	0,3984,4324,6577,11640,21338,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	26187838	26207786	chr20:26187838-26207786	0	-	26187838	26187838	8553170	5	261,108,100,75,113,	0,3954,4294,11610,19835,
#Partially deleted in new
chr20	26188407	26196891	chr20:26188407-26196891	3	+	26188407	26188407	8553170	3	610,65,273,	0,2583,8211,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	26188437	26193791	chr20:26188437-26193791	1	+	26188437	26188437	8553170	3	187,65,404,	0,2553,4950,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	26191813	26192837	chr20:26191813-26192837	0	-	26191813	26191813	8553170	2	87,705,	0,319,
#Deleted in new
chr20	26208185	26208278	chr20:26208185-26208278	3	-	26208185	26208185	5263520	1	93,	0,
#Deleted in new
chr20	26249853	26251425	chr20:26249853-26251425	1	-	26249853	26249853	8553170	2	867,163,	0,1409,
#Partially deleted in new
chr20	28580708	28602664	chr20:28580708-28602664	7	-	28580708	28580708	16724991	9	36,111,92,105,115,58,126,70,56,	0,1210,2310,5590,7934,9848,10685,19683,21900,
#Partially deleted in new
chr20	29080389	29102761	chr20:29080389-29102761	7	+	29080389	29080389	16724991	9	66,62,126,57,115,105,92,111,37,	0,2212,11204,12111,13957,16338,19979,21050,22335,
#Deleted in new
chr20	29297094	29297246	chr20:29297094-29297246	3	-	29297094	29297094	8553170	1	152,	0,
#Deleted in new
chr20	29318823	29319579	chr20:29318823-29319579	7	+	29318823	29318823	16724991	1	756,	0,
#Deleted in new
chr20	29321309	29321666	chr20:29321309-29321666	7	-	29321309	29321309	16724991	1	357,	0,
#Deleted in new
chr20	29324091	29325049	chr20:29324091-29325049	7	+	29324091	29324091	16724991	1	958,	0,
#Deleted in new
chr20	29410347	29411600	chr20:29410347-29411600	7	-	29410347	29410347	16724991	1	1253,	0,
#Deleted in new
chr20	29415263	29416911	chr20:29415263-29416911	7	-	29415263	29415263	16724991	4	503,78,78,176,	0,826,1133,1472,
#Deleted in new
chr20	29427399	29427883	chr20:29427399-29427883	7	-	29427399	29427399	16724991	1	484,	0,
#Deleted in new
chr20	29430722	29432913	chr20:29430722-29432913	7	+	29430722	29430722	16724991	1	2191,	0,
#Deleted in new
chr20	29448516	29449306	chr20:29448516-29449306	7	-	29448516	29448516	16724991	1	790,	0,
#Partially deleted in new
chr20	29480146	29497179	chr20:29480146-29497179	7	-	29480146	29480146	16724991	9	36,111,92,100,115,58,126,70,62,	0,1211,2307,5595,7952,9860,10700,14739,16971,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	29575059	29575171	chr20:29575059-29575171	3	+	29575059	29575059	8553170	1	112,	0,
#Deleted in new
chr20	29641777	29641976	chr20:29641777-29641976	7	+	29641777	29641777	16724991	1	199,	0,
#Deleted in new
chr20	29741509	29741661	chr20:29741509-29741661	3	-	29741509	29741509	8553170	1	152,	0,
#Deleted in new
chr20	29746180	29748090	chr20:29746180-29748090	7	+	29746180	29746180	16724991	1	1910,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	29874058	29874177	chr20:29874058-29874177	3	+	29874058	29874058	8553170	1	119,	0,
#Deleted in new
chr20	29878635	29879363	chr20:29878635-29879363	7	-	29878635	29878635	16724991	1	728,	0,
#Deleted in new
chr20	30214764	30214976	chr20:30214764-30214976	7	-	30214764	30214764	16724991	1	212,	0,
#Deleted in new
chr20	30278905	30288479	chr20:30278905-30288479	3	-	30278905	30278905	8553170	3	3230,1033,209,	0,7534,9365,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	30309014	30309126	chr20:30309014-30309126	3	-	30309014	30309014	8553170	1	112,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	30323811	30335687	chr20:30323811-30335687	1	-	30323811	30323811	8553170	4	135,300,144,140,	0,715,7296,11736,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	30331079	30361730	chr20:30331079-30361730	3	-	30331079	30331079	8553170	4	172,136,78,74,	0,19252,26030,30577,
#Partially deleted in new
chr20	30377371	30399257	chr20:30377371-30399257	7	+	30377371	30377371	16724991	9	66,63,126,50,112,105,92,111,36,	0,2217,11081,11995,13825,16179,19490,20563,21850,
#Deleted in new
chr20	30403122	30403384	chr20:30403122-30403384	7	-	30403122	30403122	16724991	1	262,	0,
#Deleted in new
chr20	30484924	30485076	chr20:30484924-30485076	3	-	30484924	30484924	8553170	1	152,	0,
#Partially deleted in new
chr20	30545600	30551470	chr20:30545600-30551470	7	+	30545600	30545600	16724991	2	127,1627,	0,4243,
#Partially deleted in new
chr20	30656032	30723855	chr20:30656032-30723855	7	-	30656032	30656032	16724991	22	45,223,212,282,130,113,149,925,194,164,71,72,29,85,70,31,56,138,107,174,115,203,	0,6987,8547,9452,17036,19188,24144,25843,27931,29494,33716,39720,39883,42703,46751,49489,56046,58723,59924,63846,64183,67620,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	30713239	30713346	chr20:30713239-30713346	3	-	30713239	30713239	8553170	1	107,	0,
#Partially deleted in new
chr20	30719815	30723932	chr20:30719815-30723932	5	-	30719815	30719815	16724991	2	237,280,	0,3837,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	30816155	30816274	chr20:30816155-30816274	3	-	30816155	30816155	8553170	1	119,	0,
#Deleted in new
chr20	31257663	31259632	chr20:31257663-31259632	3	+	31257663	31259632	789624	2	94,173,	0,1796,
#Deleted in new
chr20	31274169	31274867	chr20:31274169-31274867	7	+	31274169	31274169	16724991	1	698,	0,
#Deleted in new
chr20	31285316	31286835	chr20:31285316-31286835	7	-	31285316	31285316	16724991	1	1519,	0,
#Partially deleted in new
chr20	31303211	31308585	chr20:31303211-31308585	3	-	31303211	31308585	789624	2	242,67,	0,5307,
#Partially deleted in new
chr20	31311302	31311962	chr20:31311302-31311962	7	-	31311302	31311302	16724991	2	257,75,	0,585,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	31341370	31344471	chr20:31341370-31344471	7	-	31341370	31341370	16724991	4	789,769,82,764,	0,1075,1947,2337,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	31356869	31356978	chr20:31356869-31356978	7	+	31356869	31356869	16724991	1	109,	0,
#Deleted in new
chr20	31360789	31360930	chr20:31360789-31360930	7	+	31360789	31360789	16724991	1	141,	0,
#Partially deleted in new
chr20	31368617	31373923	chr20:31368617-31373923	3	+	31368650	31373170	789624	2	91,1067,	0,4239,
#Deleted in new
chr20	31376318	31376446	chr20:31376318-31376446	3	+	31376318	31376318	8553170	1	128,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	31377163	31390590	chr20:31377163-31390590	1	-	31377408	31390483	789624	3	276,40,168,	0,1188,13259,
#Partially deleted in new
chr20	31377163	31390603	chr20:31377163-31390603	3	-	31377245	31390483	789624	2	276,181,	0,13259,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	31377163	31390569	chr20:31377163-31390569	0	-	31377163	31377163	789624	4	276,40,37,147,	0,1188,11159,13259,
#Partially deleted in new
chr20	31388967	31390483	chr20:31388967-31390483	1	-	31389024	31390483	789624	2	263,61,	0,1455,
#Partially deleted in new
chr20	31404844	31412838	chr20:31404844-31412838	0	-	31404844	31404844	8553170	2	241,217,	0,7777,
#Deleted in new
chr20	31404868	31406266	chr20:31404868-31406266	3	-	31404912	31406152	789624	2	217,172,	0,1226,
#Partially deleted in new
chr20	31421529	31423867	chr20:31421529-31423867	5	-	31421529	31421529	16724991	2	149,48,	0,2290,
#Partially deleted in new
chr20	31440518	31450257	chr20:31440518-31450257	3	+	31440698	31450174	789624	2	238,229,	0,9510,
#Partially deleted in new
chr20	31465505	31473013	chr20:31465505-31473013	3	-	31465505	31473013	789624	2	158,58,	0,7450,
#Partially deleted in new
chr20	31472598	31476757	chr20:31472598-31476757	0	-	31472598	31472598	8553170	2	440,131,	0,4028,
#Partially deleted in new
chr20	31475292	31484905	chr20:31475292-31484905	3	+	31476445	31484430	0	5	74,559,83,202,747,	0,934,2535,6994,8866,
#Partially deleted in new
chr20	31485777	31487574	chr20:31485777-31487574	3	+	31485777	31485777	789624	4	246,164,78,99,	0,1254,1504,1698,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	31514409	31571606	chr20:31514409-31571606	1	+	31514551	31569219	789624	13	325,99,83,89,86,126,58,84,37,103,86,147,2487,	0,13074,23769,30537,34619,34797,35654,40336,45201,47224,51800,53668,54710,
#Partially deleted in new
chr20	31514427	31569567	chr20:31514427-31569567	1	+	31514551	31568228	789624	13	307,99,83,89,86,126,58,84,37,103,86,203,448,	0,13056,23751,30519,34601,34779,35636,40318,45183,47206,51782,53650,54692,
#Partially deleted in new
chr20	31514427	31569567	chr20:31514427-31569567	3	+	31514551	31569219	789624	12	307,99,83,89,86,126,58,84,37,103,86,448,	0,13056,23751,30519,34601,34779,35636,40318,45183,47206,51782,54692,
#Partially deleted in new
chr20	31514441	31569326	chr20:31514441-31569326	0	+	31514551	31564139	8553170	14	293,99,129,83,89,86,126,58,84,37,103,100,147,207,	0,13042,13480,23737,30505,34587,34765,35622,40304,45169,47192,49677,53636,54678,
#Partially deleted in new
chr20	31514454	31569444	chr20:31514454-31569444	1	+	31514551	31569219	8553170	13	280,99,129,83,89,86,126,58,84,37,103,86,325,	0,13029,13467,23724,30492,34574,34752,35609,40291,45156,47179,51755,54665,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	31514456	31541733	chr20:31514456-31541733	1	+	31514551	31538328	789624	3	278,99,3555,	0,13027,23722,
#Partially deleted in new
chr20	31514497	31569407	chr20:31514497-31569407	0	+	31514551	31538328	8553170	12	237,99,376,89,86,126,58,70,37,103,86,288,	0,12986,23681,30449,34531,34709,35566,40262,45113,47136,51712,54622,
#Partially deleted in new
chr20	31514501	31549217	chr20:31514501-31549217	0	+	31514501	31514501	8553170	6	233,99,181,89,86,11,	0,12982,23677,30445,34527,34705,
#Partially deleted in new
chr20	31514520	31561730	chr20:31514520-31561730	0	+	31514551	31561730	789624	9	214,99,83,89,86,58,84,37,97,	0,12963,23658,30426,34508,35543,40225,45090,47113,
#Partially deleted in new
chr20	31514551	31569215	chr20:31514551-31569215	0	+	31514551	31567643	789624	13	183,99,83,89,86,126,58,84,37,103,86,101,96,	0,12932,23627,30395,34477,34655,35512,40194,45059,47082,51658,53088,54568,
#Partially deleted in new
chr20	31514620	31554828	chr20:31514620-31554828	0	+	31514620	31514620	8553170	5	114,99,89,58,83,	0,12863,30326,35443,40125,
#Deleted in new
chr20	31535262	31535626	chr20:31535262-31535626	3	+	31535262	31535262	8553170	1	364,	0,
#Partially deleted in new
chr20	31538182	31568211	chr20:31538182-31568211	0	+	31538182	31538182	8553170	9	79,89,86,58,84,37,103,86,134,	0,6764,10846,11881,16563,21428,23451,28027,29895,
#Partially deleted in new
chr20	31538194	31569567	chr20:31538194-31569567	0	+	31538194	31538194	8553170	10	67,89,150,126,58,84,37,103,86,448,	0,6752,10770,11012,11869,16551,21416,23439,28015,30925,
#Partially deleted in new
chr20	31545027	31569418	chr20:31545027-31569418	0	+	31545027	31545027	8553170	8	8,86,126,58,84,37,103,299,	0,4001,4179,5036,9718,14583,16606,24092,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	31547381	31566275	chr20:31547381-31566275	0	+	31547381	31547381	8553170	9	225,117,86,126,58,84,37,103,66,	0,1295,1647,1825,2682,7364,12229,14252,18828,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	31547405	31549033	chr20:31547405-31549033	0	+	31547405	31547405	8553170	2	201,654,	0,974,
#Deleted in new
chr20	31547411	31548081	chr20:31547411-31548081	3	+	31547503	31548049	8553170	1	670,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	31547445	31569541	chr20:31547445-31569541	0	+	31547445	31547445	8553170	9	1669,126,58,84,37,103,86,203,422,	0,1761,2618,7300,12165,14188,18764,20632,21674,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	31547447	31549029	chr20:31547447-31549029	0	+	31547447	31547447	8553170	2	245,353,	0,1229,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	31547464	31554825	chr20:31547464-31554825	0	+	31547464	31547464	8553170	6	142,414,86,126,58,80,	0,915,1564,1742,2599,7281,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	31548638	31569308	chr20:31548638-31569308	0	+	31548638	31548638	8553170	7	476,126,58,37,103,86,189,	0,568,1425,10972,12995,17571,20481,
#Partially deleted in new
chr20	31548780	31569174	chr20:31548780-31569174	0	+	31548780	31548780	8553170	7	334,58,84,37,103,86,55,	0,1283,5965,10830,12853,17429,20339,
#Partially deleted in new
chr20	31549026	31562671	chr20:31549026-31562671	0	+	31549026	31549026	8553170	7	88,126,58,84,37,103,259,	0,180,1037,5719,10584,12607,13386,
#Deleted in new
chr20	31549061	31550471	chr20:31549061-31550471	0	+	31549061	31549061	8553170	3	53,126,408,	0,145,1002,
#Partially deleted in new
chr20	31549090	31567986	chr20:31549090-31567986	0	+	31549090	31549090	8553170	8	24,126,58,84,37,103,86,347,	0,116,973,5655,10520,12543,17119,18549,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	31554587	31566267	chr20:31554587-31566267	0	+	31554587	31554587	8553170	4	242,37,103,58,	0,5023,7046,11622,
#Partially deleted in new
chr20	31554746	31569567	chr20:31554746-31569567	0	+	31554746	31554746	8553170	4	83,37,107,448,	0,4864,6887,14373,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	31559615	31577923	chr20:31559615-31577923	0	+	31559615	31577621	789624	3	32,103,320,	0,2018,17988,
#Deleted in new
chr20	31566056	31569252	chr20:31566056-31569252	0	+	31566056	31566056	8553170	2	239,133,	0,3063,
#Deleted in new
chr20	31566153	31569567	chr20:31566153-31569567	0	+	31566153	31566153	8553170	3	142,167,448,	0,1486,2966,
#Partially deleted in new
chr20	31567706	31573263	chr20:31567706-31573263	3	-	31567706	31567706	789624	3	242,125,122,	0,5092,5435,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	31580889	31581214	chr20:31580889-31581214	3	+	31580889	31580889	8553170	1	325,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	31581088	31581192	chr20:31581088-31581192	3	+	31581088	31581088	8553170	1	104,	0,
#Deleted in new
chr20	31605282	31606515	chr20:31605282-31606515	1	+	31605387	31605837	789624	1	1233,	0,
#Deleted in new
chr20	31605282	31606515	chr20:31605282-31606515	3	+	31605387	31606094	789624	2	531,463,	0,770,
#Deleted in new
chr20	31607185	31607240	chr20:31607185-31607240	3	+	31607185	31607185	5263520	1	55,	0,
#Partially deleted in new
chr20	31637887	31645006	chr20:31637887-31645006	3	+	31639017	31644904	789624	5	75,82,165,132,239,	0,1130,2045,5516,6880,
#Partially deleted in new
chr20	31637932	31644828	chr20:31637932-31644828	0	+	31637932	31637932	8553170	4	30,82,165,61,	0,1085,2000,6835,
#Partially deleted in new
chr20	31664451	31722898	chr20:31664451-31722898	3	-	31665948	31722218	0	3	1635,694,281,	0,57203,58166,
#Partially deleted in new
chr20	31664451	31722860	chr20:31664451-31722860	1	-	31665948	31722218	0	3	1635,505,243,	0,57392,58166,
#Partially deleted in new
chr20	31664451	31722597	chr20:31664451-31722597	1	-	31665948	31722218	0	2	1635,943,	0,57203,
#Partially deleted in new
chr20	31666034	31723900	chr20:31666034-31723900	0	-	31666034	31722218	789624	3	52,676,166,	0,55620,57700,
#Partially deleted in new
chr20	31686215	31716825	chr20:31686215-31716825	3	+	31686215	31686215	8553170	2	169,205,	0,30405,
#Deleted in new
chr20	31721506	31723409	chr20:31721506-31723409	3	+	31721506	31721506	789624	1	1903,	0,
#Deleted in new
chr20	31721654	31723989	chr20:31721654-31723989	0	-	31721654	31722218	789624	2	694,126,	0,2209,
#Deleted in new
chr20	31721654	31723098	chr20:31721654-31723098	0	-	31721654	31722218	789624	2	676,481,	0,963,
#Deleted in new
chr20	31721654	31723954	chr20:31721654-31723954	0	-	31721654	31722218	789624	2	694,220,	0,2080,
#Deleted in new
chr20	31721675	31723989	chr20:31721675-31723989	0	-	31721675	31722218	789624	2	655,126,	0,2188,
#Deleted in new
chr20	31722072	31722548	chr20:31722072-31722548	0	-	31722072	31722218	789624	2	276,105,	0,371,
#Partially deleted in new
chr20	31739270	31801805	chr20:31739270-31801805	3	+	31757476	31801080	0	18	351,107,176,123,127,129,123,122,152,172,142,217,96,177,147,112,188,836,	0,3270,18136,20786,27285,31072,32289,36596,38216,39542,42978,44434,53464,54577,55131,58133,59094,61699,
#Deleted in new
chr20	31808502	31808749	chr20:31808502-31808749	7	-	31808502	31808502	16724991	1	247,	0,
#Partially deleted in new
chr20	31819307	31834689	chr20:31819307-31834689	3	+	31819580	31833797	0	12	325,421,299,106,94,110,142,71,129,153,133,973,	0,818,2131,4169,4951,7297,7489,11511,11705,12395,12696,14409,
#Partially deleted in new
chr20	31819372	31834689	chr20:31819372-31834689	1	+	31819580	31833797	0	13	56,100,421,299,106,94,110,142,71,129,153,133,973,	0,160,753,2066,4104,4886,7232,7424,11446,11640,12330,12631,14344,
#Partially deleted in new
chr20	31826776	31834689	chr20:31826776-31834689	0	+	31826776	31826776	8553170	6	162,71,129,153,133,973,	0,4042,4236,4926,5227,6940,
#Deleted in new
chr20	31844300	31845619	chr20:31844300-31845619	3	-	31844549	31845542	789624	1	1319,	0,
#Partially deleted in new
chr20	31847636	31870664	chr20:31847636-31870664	1	-	31848403	31870587	0	10	929,98,137,65,172,75,50,83,34,89,	0,1169,2101,2975,14934,16270,17316,19434,21927,22939,
#Deleted in new
chr20	31847636	31849558	chr20:31847636-31849558	0	-	31848403	31849558	789624	3	929,98,21,	0,1169,1901,
#Partially deleted in new
chr20	31861066	31870747	chr20:31861066-31870747	3	-	31861402	31870337	0	7	609,172,75,50,83,34,431,	0,1504,2840,3886,6004,8497,9250,
#Partially deleted in new
chr20	31861066	31870629	chr20:31861066-31870629	1	-	31861402	31870587	0	7	609,172,75,50,83,34,54,	0,1504,2840,3886,6004,8497,9509,
#Partially deleted in new
chr20	31861066	31869998	chr20:31861066-31869998	1	-	31861402	31862696	0	7	609,172,75,50,83,34,189,	0,1504,2840,3886,6004,8497,8743,
#Partially deleted in new
chr20	31861066	31870280	chr20:31861066-31870280	1	-	31861402	31862696	0	7	609,172,75,50,83,34,233,	0,1504,2840,3886,6004,8497,8981,
#Partially deleted in new
chr20	31861066	31870225	chr20:31861066-31870225	1	-	31861402	31862696	0	6	609,172,75,50,83,662,	0,1504,2840,3886,6004,8497,
#Partially deleted in new
chr20	31862586	31870201	chr20:31862586-31870201	0	-	31862586	31862586	8553170	6	156,75,50,83,34,392,	0,1320,2366,4484,6977,7223,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	31863626	31870501	chr20:31863626-31870501	0	-	31863626	31863626	8553170	6	355,124,50,83,34,185,	0,588,1326,3444,5937,6690,
#Partially deleted in new
chr20	31863906	31870572	chr20:31863906-31870572	0	-	31863906	31870337	789624	4	75,50,83,256,	0,1046,3164,6410,
#Partially deleted in new
chr20	31870701	31944961	chr20:31870701-31944961	3	+	31871126	31943021	789624	17	248,74,44,93,112,186,69,91,41,43,59,197,114,125,111,80,936,	0,420,16494,27771,37889,39035,49162,52261,54307,55347,63098,63990,66694,68440,72243,73064,73324,
#Partially deleted in new
chr20	31870710	31944959	chr20:31870710-31944959	0	+	31871126	31908620	789624	18	243,74,82,44,93,112,186,69,91,41,59,197,114,105,125,111,80,934,	0,411,13310,16485,27762,37880,39026,49153,52252,54298,63089,63981,66685,67448,68431,72234,73055,73315,
#Partially deleted in new
chr20	31870758	31944199	chr20:31870758-31944199	0	+	31871126	31908620	789624	15	191,74,82,44,93,112,186,91,41,88,59,114,111,80,174,	0,363,13262,16437,27714,37832,38978,52204,54250,55114,63041,66637,72186,73007,73267,
#Partially deleted in new
chr20	31870758	31944199	chr20:31870758-31944199	0	+	31898509	31938212	789624	17	195,44,93,112,186,69,91,41,88,59,197,114,82,125,111,80,174,	0,16437,27714,37832,38978,49105,52204,54250,55114,63041,63933,66637,67423,68383,72186,73007,73267,
#Partially deleted in new
chr20	31870817	31944944	chr20:31870817-31944944	0	+	31879882	31938212	789624	16	132,342,44,93,112,186,69,91,41,88,59,197,114,82,125,2000,	0,8738,16378,27655,37773,38919,49046,52145,54191,55055,62982,63874,66578,67364,68324,72127,
#Partially deleted in new
chr20	31871126	31944962	chr20:31871126-31944962	1	+	31871126	31943021	789624	14	69,44,93,112,186,69,91,41,43,59,197,114,125,2018,	0,16069,27346,37464,38610,48737,51836,53882,54922,62673,63565,66269,68015,71818,
#Partially deleted in new
chr20	31879805	31943358	chr20:31879805-31943358	0	+	31879882	31923047	789624	15	92,44,93,112,186,69,74,91,41,88,59,197,114,125,414,	0,7390,18667,28785,29931,40058,40840,43157,45203,46067,53994,54886,57590,59336,63139,
#Partially deleted in new
chr20	31879816	31944963	chr20:31879816-31944963	1	+	31879882	31943021	789624	12	81,82,44,93,91,41,88,59,197,114,125,2019,	0,4204,7379,18656,43146,45192,46056,53983,54875,57579,59325,63128,
#Partially deleted in new
chr20	31879828	31943007	chr20:31879828-31943007	0	+	31879882	31934821	789624	13	69,44,93,112,186,69,91,41,59,197,114,125,63,	0,7367,18644,28762,29908,40035,43134,45180,53971,54863,57567,59313,63116,
#Partially deleted in new
chr20	31879836	31943398	chr20:31879836-31943398	0	+	31879882	31923047	789624	15	61,44,93,112,186,69,74,91,41,88,59,197,114,125,454,	0,7359,18636,28754,29900,40027,40809,43126,45172,46036,53963,54855,57559,59305,63108,
#Partially deleted in new
chr20	31879847	31944959	chr20:31879847-31944959	0	+	31879882	31908620	789624	16	50,44,91,112,186,69,91,41,88,59,197,114,125,111,80,934,	0,7348,18627,28743,29889,40016,43115,45161,46025,53952,54844,57548,59294,63097,63918,64178,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	31901253	31901426	chr20:31901253-31901426	3	+	31901253	31901253	8553170	1	173,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	31933799	31941231	chr20:31933799-31941231	0	+	31933799	31937455	789624	4	59,114,82,2090,	0,3596,4382,5342,
#Partially deleted in new
chr20	31937469	31943928	chr20:31937469-31943928	0	+	31937469	31943458	789624	2	40,984,	0,5475,
#Partially deleted in new
chr20	31944341	31952092	chr20:31944341-31952092	3	-	31945806	31951961	789624	5	1548,81,75,76,218,	0,2154,4466,5970,7533,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	31968001	32003387	chr20:31968001-32003387	3	+	31968175	31997457	789624	3	758,203,6883,	0,27066,28503,
#Deleted in new
chr20	31970180	31970831	chr20:31970180-31970831	3	+	31970180	31970180	8553170	1	651,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	32008350	32008472	chr20:32008350-32008472	7	+	32008350	32008350	16724991	1	122,	0,
#Partially deleted in new
chr20	32010449	32032180	chr20:32010449-32032180	3	+	32010454	32029802	789624	9	35,168,84,184,467,136,130,139,1180,	0,4454,7350,7529,8493,12210,18545,19250,20551,
#Partially deleted in new
chr20	32019217	32032180	chr20:32019217-32032180	0	+	32019217	32031314	789624	6	192,136,64,130,139,1180,	0,3442,6638,9777,10482,11783,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	32027752	32031575	chr20:32027752-32031575	3	-	32027752	32027752	8553170	2	1419,594,	0,3229,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	32050587	32050705	chr20:32050587-32050705	7	+	32050587	32050587	16724991	1	118,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	32052187	32101852	chr20:32052187-32101852	1	+	32071662	32101519	0	14	299,64,121,43,103,99,104,150,153,180,77,154,132,536,	0,17500,19474,21131,21528,22435,27586,31706,32203,34440,36380,41675,46816,49129,
#Partially deleted in new
chr20	32052196	32101519	chr20:32052196-32101519	1	+	32052424	32101519	789624	13	290,121,43,100,99,104,150,153,180,77,154,132,203,	0,19465,21122,21522,22426,27577,31697,32194,34431,36371,41666,46807,49120,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	32052241	32101849	chr20:32052241-32101849	0	+	32052424	32054279	789624	14	245,66,121,43,103,99,104,150,153,180,77,154,132,533,	0,1974,19420,21077,21474,22381,27532,31652,32149,34386,36326,41621,46762,49075,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	32052241	32101660	chr20:32052241-32101660	0	+	32052424	32071721	789624	14	245,64,121,43,103,99,104,150,153,180,77,154,132,344,	0,17446,19420,21077,21474,22381,27532,31652,32149,34386,36326,41621,46762,49075,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	32052241	32101856	chr20:32052241-32101856	1	+	32071662	32101519	0	13	245,121,43,103,99,104,150,153,180,77,154,132,540,	0,19420,21077,21474,22381,27532,31652,32149,34386,36326,41621,46762,49075,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	32052241	32101660	chr20:32052241-32101660	1	+	32071662	32101519	0	14	245,64,121,43,103,99,104,150,153,180,77,154,132,344,	0,17446,19420,21077,21474,22381,27532,31652,32149,34386,36326,41621,46762,49075,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	32052260	32101856	chr20:32052260-32101856	1	+	32052424	32101519	789624	13	226,121,43,103,99,104,150,153,180,77,154,132,540,	0,19401,21058,21455,22362,27513,31633,32130,34367,36307,41602,46743,49056,
#Partially deleted in new
chr20	32052260	32101519	chr20:32052260-32101519	1	+	32071662	32101519	0	13	226,121,43,100,99,104,150,153,180,77,154,132,203,	0,19401,21058,21458,22362,27513,31633,32130,34367,36307,41602,46743,49056,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	32052287	32072589	chr20:32052287-32072589	0	+	32052287	32052287	8553170	2	199,928,	0,19374,
#Partially deleted in new
chr20	32052424	32101519	chr20:32052424-32101519	3	+	32052424	32101519	0	13	62,121,43,103,99,104,150,153,180,77,154,132,203,	0,19237,20894,21291,22198,27349,31469,31966,34203,36143,41438,46579,48892,
#Partially deleted in new
chr20	32052424	32101519	chr20:32052424-32101519	1	+	32052424	32101519	0	13	62,121,43,100,99,104,150,153,180,77,154,132,203,	0,19237,20894,21294,22198,27349,31469,31966,34203,36143,41438,46579,48892,
#Partially deleted in new
chr20	32109505	32167258	chr20:32109505-32167258	3	+	32109740	32165444	789624	18	250,114,100,169,130,124,119,112,71,133,82,76,84,176,64,120,90,1964,	0,23507,26568,31991,32260,33476,35585,35806,37279,40128,41116,41294,45597,48288,48945,50486,51770,55789,
#Partially deleted in new
chr20	32109716	32141785	chr20:32109716-32141785	0	+	32109740	32136905	789624	6	39,114,100,121,169,20,	0,23296,26357,27160,31780,32049,
#Partially deleted in new
chr20	32109727	32141827	chr20:32109727-32141827	0	+	32109740	32136905	789624	6	28,114,100,121,125,62,	0,23285,26346,27149,31813,32038,
#Partially deleted in new
chr20	32109735	32167258	chr20:32109735-32167258	1	+	32133048	32165444	789624	18	304,114,100,169,130,124,119,112,71,133,82,76,84,176,64,120,90,1964,	0,23277,26338,31761,32030,33246,35355,35576,37049,39898,40886,41064,45367,48058,48715,50256,51540,55559,
#Partially deleted in new
chr20	32109766	32141606	chr20:32109766-32141606	0	+	32133048	32141569	789624	4	273,114,100,66,	0,23246,26307,31774,
#Deleted in new
chr20	32116170	32116629	chr20:32116170-32116629	3	+	32116170	32116170	8553170	1	459,	0,
#Partially deleted in new
chr20	32159142	32167258	chr20:32159142-32167258	0	+	32159142	32159142	8553170	3	969,90,1964,	0,2133,6152,
#Partially deleted in new
chr20	32161092	32165587	chr20:32161092-32165587	0	+	32161092	32161092	8553170	2	273,293,	0,4202,
#Partially deleted in new
chr20	32170389	32170790	chr20:32170389-32170790	7	-	32170389	32170389	16724991	1	401,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	32186476	32190360	chr20:32186476-32190360	5	-	32186476	32186476	16724991	1	3884,	0,
#Deleted in new
chr20	32189201	32190527	chr20:32189201-32190527	7	-	32189201	32189201	16724991	1	1326,	0,
#Partially deleted in new
chr20	32192502	32207791	chr20:32192502-32207791	3	-	32196451	32202178	789624	3	5180,374,151,	0,9416,15138,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	32207879	32238667	chr20:32207879-32238667	3	+	32207941	32234661	0	7	186,122,183,113,193,243,4195,	0,2191,7389,8729,20383,22939,26593,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	32207892	32217923	chr20:32207892-32217923	1	+	32207941	32217050	0	5	173,122,183,113,916,	0,2178,7376,8716,9115,
#Partially deleted in new
chr20	32207934	32234568	chr20:32207934-32234568	0	+	32207934	32207934	8553170	6	131,183,113,193,243,96,	0,7334,8674,20328,22884,26538,
#Partially deleted in new
chr20	32216664	32231336	chr20:32216664-32231336	0	+	32216664	32216664	8553170	3	57,193,518,	0,11598,14154,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	32234913	32236716	chr20:32234913-32236716	0	+	32234913	32234913	8553170	2	209,284,	0,1519,
#Partially deleted in new
chr20	32237794	32237847	chr20:32237794-32237847	3	+	32237794	32237794	5263520	1	53,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	32277663	32335011	chr20:32277663-32335011	3	+	32309777	32331319	0	9	102,1469,102,123,119,114,106,179,3789,	0,32049,38554,38863,39092,49107,49892,52477,53559,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	32355052	32355734	chr20:32355052-32355734	3	+	32355052	32355052	8553170	1	682,	0,
#Partially deleted in new
chr20	32358329	32439319	chr20:32358329-32439319	3	+	32358775	32437338	789624	13	503,83,3,109,121,98,94,153,164,97,106,634,4888,	0,8054,9397,10685,69798,69995,71008,71571,72991,73253,74550,74954,76102,
#Partially deleted in new
chr20	32358343	32372547	chr20:32358343-32372547	1	+	32358775	32372169	789624	4	489,84,111,384,	0,8040,10669,13820,
#Partially deleted in new
chr20	32358343	32439318	chr20:32358343-32439318	1	+	32358775	32437338	789624	12	489,84,111,121,98,94,153,164,97,106,634,4887,	0,8040,10669,69784,69981,70994,71557,72977,73239,74536,74940,76088,
#Partially deleted in new
chr20	32358348	32372549	chr20:32358348-32372549	1	+	32358775	32372169	789624	5	484,83,3,109,386,	0,8035,9378,10666,13815,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	32358358	32429431	chr20:32358358-32429431	0	+	32358775	32371783	789624	7	474,83,109,97,121,98,94,	0,8025,10656,13419,69769,69966,70979,
#Partially deleted in new
chr20	32358412	32437891	chr20:32358412-32437891	1	+	32358775	32437338	789624	13	183,69,84,111,121,98,94,153,164,97,106,634,3460,	0,351,7971,10600,69715,69912,70925,71488,72908,73170,74467,74871,76019,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	32358542	32372223	chr20:32358542-32372223	0	+	32358775	32371783	789624	6	290,83,3,109,97,60,	0,7841,9184,10472,13235,13621,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	32358965	32372233	chr20:32358965-32372233	0	+	32366410	32371783	8553170	7	886,13,83,3,109,97,70,	0,1828,7418,8761,10049,12812,13198,
#Partially deleted in new
chr20	32359064	32439318	chr20:32359064-32439318	1	+	32359307	32437338	789624	12	270,83,3,109,121,98,94,164,97,106,634,4887,	0,7319,8662,9950,69063,69260,70273,72256,72518,73815,74219,75367,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	32359087	32372233	chr20:32359087-32372233	0	+	32359307	32371783	789624	6	247,83,3,109,97,70,	0,7296,8639,9927,12690,13076,
#Partially deleted in new
chr20	32359109	32372238	chr20:32359109-32372238	1	+	32359307	32372169	789624	5	225,83,3,109,75,	0,7274,8617,9905,13054,
#Partially deleted in new
chr20	32359236	32429357	chr20:32359236-32429357	0	+	32366410	32429357	789624	7	406,83,3,109,121,98,20,	0,7147,8490,9778,68891,69088,70101,
#Partially deleted in new
chr20	32359564	32372553	chr20:32359564-32372553	1	+	32359746	32372169	789624	5	227,83,3,109,390,	0,6819,8162,9450,12599,
#Partially deleted in new
chr20	32359746	32439318	chr20:32359746-32439318	1	+	32359746	32437338	789624	12	45,83,109,121,98,94,153,164,97,106,634,4887,	0,6637,9268,68381,68578,69591,70154,71574,71836,73133,73537,74685,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	32360016	32372238	chr20:32360016-32372238	0	+	32366410	32371783	789624	7	570,97,83,3,109,97,75,	0,693,6367,7710,8998,11761,12147,
#Partially deleted in new
chr20	32360347	32428193	chr20:32360347-32428193	0	+	32366410	32428193	789624	5	239,83,3,109,66,	0,6036,7379,8667,67780,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	32360633	32372233	chr20:32360633-32372233	0	+	32366410	32371783	789624	6	173,83,3,109,97,70,	0,5750,7093,8381,11144,11530,
#Partially deleted in new
chr20	32366383	32429932	chr20:32366383-32429932	0	+	32366383	32366383	8553170	5	83,3,109,295,595,	0,1343,2631,61744,62954,
#Deleted in new
chr20	32427071	32428349	chr20:32427071-32428349	0	+	32427071	32427071	8553170	2	1177,25,	0,1253,
#Partially deleted in new
chr20	32428127	32429303	chr20:32428127-32429303	0	+	32428127	32428127	8553170	2	295,97,	0,1079,
#Partially deleted in new
chr20	32428171	32429517	chr20:32428171-32429517	0	+	32428171	32428171	8553170	3	77,98,180,	0,153,1166,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	32428763	32438415	chr20:32428763-32438415	0	+	32428763	32428763	8553170	4	2721,97,106,5132,	0,2819,4116,4520,
#Deleted in new
chr20	32429739	32431627	chr20:32429739-32431627	0	+	32429739	32429739	8553170	3	314,164,72,	0,1581,1816,
#Partially deleted in new
chr20	32429881	32432895	chr20:32429881-32432895	0	+	32429881	32429881	8553170	4	172,164,97,16,	0,1439,1701,2998,
#Partially deleted in new
chr20	32430861	32433410	chr20:32430861-32433410	0	+	32430861	32430861	8553170	5	315,164,97,106,127,	0,459,721,2018,2422,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	32432358	32434636	chr20:32432358-32434636	0	+	32432358	32432358	8553170	3	627,634,205,	0,925,2073,
#Partially deleted in new
chr20	32443058	32483471	chr20:32443058-32483471	1	-	32447595	32474709	789624	8	4758,202,123,192,186,278,142,110,	0,9177,9825,10245,10517,13059,31542,40303,
#Partially deleted in new
chr20	32443061	32584890	chr20:32443061-32584890	3	-	32447595	32584890	789624	11	4755,202,123,192,186,278,142,110,112,156,321,	0,9174,9822,10242,10514,13056,31539,68285,77749,84696,141508,
#Partially deleted in new
chr20	32447147	32474735	chr20:32447147-32474735	1	-	32447294	32474709	789624	8	194,66,202,123,192,186,278,135,	0,603,5088,5736,6156,6428,8970,27453,
#Deleted in new
chr20	32449754	32453607	chr20:32449754-32453607	3	+	32449754	32449754	8553170	4	335,235,146,270,	0,428,1813,3583,
#Partially deleted in new
chr20	32452883	32483497	chr20:32452883-32483497	0	-	32453699	32474709	789624	7	123,192,186,70,278,142,136,	0,420,692,1131,3234,21717,30478,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	32464779	32483582	chr20:32464779-32483582	1	-	32464950	32474709	789624	3	338,142,221,	0,9821,18582,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	32464779	32511407	chr20:32464779-32511407	0	-	32464950	32511407	789624	3	338,142,61,	0,9821,46567,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	32464779	32536397	chr20:32464779-32536397	1	-	32465102	32527829	789624	8	355,142,110,112,156,100,110,957,	0,9821,46567,56031,62978,67537,68596,70661,
#Partially deleted in new
chr20	32485536	32584828	chr20:32485536-32584828	0	-	32485759	32584828	789624	6	228,106,110,112,156,259,	0,1159,25810,35274,42221,99033,
#Partially deleted in new
chr20	32509783	32520854	chr20:32509783-32520854	0	-	32509865	32520854	789624	3	157,110,44,	0,1563,11027,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	32509958	32520285	chr20:32509958-32520285	3	+	32509958	32509958	789624	3	710,174,887,	0,1256,9440,
#Partially deleted in new
chr20	32527764	32535598	chr20:32527764-32535598	0	-	32527764	32527764	8553170	2	149,158,	0,7676,
#Partially deleted in new
chr20	32548506	32585074	chr20:32548506-32585074	0	-	32548506	32548506	8553170	2	380,505,	0,36063,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	32561092	32573888	chr20:32561092-32573888	3	+	32561092	32561092	8553170	3	87,125,257,	0,11295,12539,
#Partially deleted in new
chr20	32564991	32608890	chr20:32564991-32608890	0	+	32564991	32564991	8553170	3	24,184,581,	0,36521,43318,
#Partially deleted in new
chr20	32581962	32593900	chr20:32581962-32593900	3	+	32581962	32581962	8553170	2	162,208,	0,11730,
#Partially deleted in new
chr20	32587478	32608893	chr20:32587478-32608893	3	+	32587478	32587478	789624	3	78,184,584,	0,14034,20831,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	32631651	32673941	chr20:32631651-32673941	3	-	32650431	32651152	789624	6	2619,122,1627,149,249,310,	0,8914,17603,19366,20081,41980,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	32632182	32743523	chr20:32632182-32743523	1	-	32640581	32743391	789624	10	1911,126,49,50,91,38,57,103,54,216,	0,8383,71840,72257,72631,74400,74521,95710,95906,111125,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	32632182	32743523	chr20:32632182-32743523	0	-	32657945	32743391	789624	12	2088,122,149,1393,49,50,91,38,57,103,54,216,	0,8383,18835,24393,71840,72257,72631,74400,74521,95710,95906,111125,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	32632182	32743567	chr20:32632182-32743567	0	-	32651811	32743391	789624	11	2088,149,249,49,50,91,38,57,103,51,260,	0,18835,19550,71840,72257,72631,74400,74521,95710,95906,111125,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	32632182	32743523	chr20:32632182-32743523	3	-	32633977	32743391	789624	9	2088,49,50,91,38,57,103,54,216,	0,71840,72257,72631,74400,74521,95710,95906,111125,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	32650389	32651759	chr20:32650389-32651759	1	-	32650431	32651152	789624	3	492,149,27,	0,628,1343,
#Partially deleted in new
chr20	32690179	32690815	chr20:32690179-32690815	7	-	32690179	32690179	16724991	1	636,	0,
#Partially deleted in new
chr20	32702690	32743997	chr20:32702690-32743997	3	-	32703381	32743391	789624	9	768,49,50,91,38,57,103,54,690,	0,1332,1749,2123,3892,4013,25202,25398,40617,
#Partially deleted in new
chr20	32702702	32743455	chr20:32702702-32743455	1	-	32703381	32743391	789624	9	756,49,50,91,38,57,103,51,148,	0,1320,1737,2111,3880,4001,25190,25386,40605,
#Partially deleted in new
chr20	32702702	32743445	chr20:32702702-32743445	0	-	32742475	32743391	789624	9	1369,50,91,38,57,103,51,90,138,	0,1737,2111,3880,4001,25190,25386,39773,40605,
#Partially deleted in new
chr20	32704473	32743406	chr20:32704473-32743406	0	-	32704473	32743391	789624	7	16,91,38,57,133,54,99,	0,340,2109,2230,23419,23615,38834,
#Partially deleted in new
chr20	32762384	32809356	chr20:32762384-32809356	3	+	32780323	32807903	0	23	315,148,62,102,126,222,159,108,145,60,126,45,80,113,184,85,146,91,149,86,70,119,1595,	0,17933,18968,22373,24117,24845,26469,29216,30241,31151,33024,33265,34405,34802,36075,36859,37768,38450,38893,40000,42953,43824,45377,
#Partially deleted in new
chr20	32762423	32809356	chr20:32762423-32809356	1	+	32780323	32807903	0	20	276,148,62,102,126,222,159,108,145,126,45,80,113,184,85,146,91,149,86,1595,	0,17894,18929,22334,24078,24806,26430,29177,30202,32985,33226,34366,34763,36036,36820,37729,38411,38854,39961,45338,
#Partially deleted in new
chr20	32762423	32809356	chr20:32762423-32809356	1	+	32780323	32807903	0	22	276,148,62,102,126,222,159,108,145,126,45,80,113,184,85,146,91,149,86,70,119,1595,	0,17894,18929,22334,24078,24806,26430,29177,30202,32985,33226,34366,34763,36036,36820,37729,38411,38854,39961,42914,43785,45338,
#Partially deleted in new
chr20	32762595	32808280	chr20:32762595-32808280	1	+	32780323	32807903	0	19	104,148,62,102,222,159,108,145,126,45,80,113,184,85,146,91,149,86,519,	0,17722,18757,22162,24634,26258,29005,30030,32813,33054,34194,34591,35864,36648,37557,38239,38682,39789,45166,
#Partially deleted in new
chr20	32762641	32808069	chr20:32762641-32808069	1	+	32780323	32807903	0	18	58,148,62,222,159,108,145,126,45,80,113,184,85,146,91,149,86,308,	0,17676,18711,24588,26212,28959,29984,32767,33008,34148,34545,35818,36602,37511,38193,38636,39743,45120,
#Partially deleted in new
chr20	32779851	32809356	chr20:32779851-32809356	1	+	32780115	32807903	0	22	294,148,62,102,126,222,159,108,145,126,45,80,113,184,85,146,91,149,86,70,119,1595,	0,466,1501,4906,6650,7378,9002,11749,12774,15557,15798,16938,17335,18608,19392,20301,20983,21426,22533,25486,26357,27910,
#Partially deleted in new
chr20	32819892	32850405	chr20:32819892-32850405	3	+	32825927	32848728	0	7	136,124,146,208,122,153,1734,	0,6032,13824,16741,19842,26725,28779,
#Partially deleted in new
chr20	32843127	32854257	chr20:32843127-32854257	3	-	32843127	32843127	8553170	2	379,80,	0,11050,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	32856620	32858751	chr20:32856620-32858751	3	+	32856620	32856620	8553170	1	2131,	0,
#Partially deleted in new
chr20	32858922	32961609	chr20:32858922-32961609	3	+	32863792	32961609	789624	27	84,52,166,119,104,136,106,85,125,74,131,68,152,138,111,228,71,205,213,138,219,159,169,130,205,99,474,	0,4860,8659,17003,19781,26582,30378,33290,34251,37531,39570,47639,47920,49352,50898,52557,53871,58378,59439,61155,71475,72255,84713,99498,100855,101140,102213,
#Partially deleted in new
chr20	32863792	32878811	chr20:32863792-32878811	1	+	32863792	32878811	789624	4	42,166,119,108,	0,3789,12133,14911,
#Partially deleted in new
chr20	32898384	32903670	chr20:32898384-32903670	0	+	32898384	32898384	8553170	2	239,218,	0,5068,
#Partially deleted in new
chr20	32917059	32920219	chr20:32917059-32920219	0	+	32917059	32917059	8553170	3	446,213,142,	0,1302,3018,
#Partially deleted in new
chr20	32983772	33004433	chr20:32983772-33004433	3	-	32983793	33004340	789624	13	177,87,168,116,79,109,35,50,62,67,75,59,170,	0,1326,1963,3887,5847,11846,12551,13865,16301,17439,18814,19088,20491,
#Partially deleted in new
chr20	32983772	33004407	chr20:32983772-33004407	1	-	32983793	33004340	789624	12	177,87,168,116,79,109,35,50,62,67,59,144,	0,1326,1963,3887,5847,11846,12551,13865,16301,17439,19088,20491,
#Partially deleted in new
chr20	32999852	33004359	chr20:32999852-33004359	1	-	32999977	33004340	789624	4	283,75,59,96,	0,2734,3008,4411,
#Partially deleted in new
chr20	32999852	33004307	chr20:32999852-33004307	0	-	32999921	33004307	789624	5	283,67,75,59,44,	0,1359,2734,3008,4411,
#Partially deleted in new
chr20	33007599	33023709	chr20:33007599-33023709	3	+	33008574	33023383	789624	16	161,143,94,105,147,61,61,92,186,54,171,68,46,64,77,368,	0,941,3424,5203,6210,7836,9442,10659,11037,11462,11980,12728,12942,13681,14123,15742,
#Partially deleted in new
chr20	33031647	33044047	chr20:33031647-33044047	3	+	33031647	33044047	789624	15	97,100,105,150,64,61,92,177,54,174,68,46,64,77,33,	0,1336,2538,3115,3433,3964,4797,5914,7261,7699,8603,10322,11167,11643,12367,
#Partially deleted in new
chr20	33031647	33044041	chr20:33031647-33044041	0	+	33031647	33033369	789624	16	100,100,311,105,150,64,61,92,177,54,174,68,46,64,77,27,	0,1336,1655,2538,3115,3433,3964,4797,5914,7261,7699,8603,10322,11167,11643,12367,
#Deleted in new
chr20	33047516	33048152	chr20:33047516-33048152	7	-	33047516	33047516	16724991	1	636,	0,
#Partially deleted in new
chr20	33055423	33073628	chr20:33055423-33073628	3	+	33055423	33073605	789624	15	124,157,105,141,64,61,92,180,54,171,68,43,64,77,53,	0,1118,3954,4467,6344,8191,9033,9242,11400,13379,14464,15829,16680,17293,18152,
#Partially deleted in new
chr20	33079643	33092505	chr20:33079643-33092505	0	+	33081526	33088994	789624	7	60,108,121,64,61,92,48,	0,825,1868,9322,9854,11064,12814,
#Partially deleted in new
chr20	33081526	33111751	chr20:33081526-33111751	3	+	33081526	33111437	789624	16	106,63,508,105,144,64,61,92,201,54,171,68,43,64,77,338,	0,1411,1840,3365,4494,7439,7971,9181,10931,13573,16090,18899,21445,23283,26217,29887,
#Partially deleted in new
chr20	33104703	33111751	chr20:33104703-33111751	0	+	33104703	33104703	8553170	3	170,77,338,	0,3040,6710,
#Partially deleted in new
chr20	33161767	33181412	chr20:33161767-33181412	3	+	33169145	33180560	789624	9	131,172,145,108,153,82,64,78,189,	0,7363,11164,12311,13639,16379,17836,18752,19456,
#Partially deleted in new
chr20	33168153	33181412	chr20:33168153-33181412	1	+	33169145	33180560	789624	9	56,172,145,108,153,82,64,78,189,	0,977,4778,5925,7253,9993,11450,12366,13070,
#Partially deleted in new
chr20	33187390	33188292	chr20:33187390-33188292	7	+	33187390	33187390	16724991	2	446,111,	0,791,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	33193584	33198796	chr20:33193584-33198796	5	+	33193584	33193584	16724991	2	57,599,	0,4613,
#Partially deleted in new
chr20	33193604	33210462	chr20:33193604-33210462	7	+	33193604	33193604	16724991	9	37,114,148,105,150,81,64,80,424,	0,4593,5710,7927,8907,11518,12216,14096,16434,
#Partially deleted in new
chr20	33198208	33205169	chr20:33198208-33205169	4	+	33198208	33198208	16724991	5	103,165,105,150,47,	0,1089,3323,4303,6914,
#Partially deleted in new
chr20	33198211	33207741	chr20:33198211-33207741	5	+	33198211	33198211	16724991	7	100,148,105,150,81,64,41,	0,1103,3320,4300,6911,7609,9489,
#Partially deleted in new
chr20	33214919	33217067	chr20:33214919-33217067	3	-	33214919	33214919	8553170	2	218,148,	0,2000,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	33217309	33227758	chr20:33217309-33227758	0	+	33217309	33217309	8553170	7	354,152,151,108,1393,64,221,	0,6146,6501,7045,7788,9620,10228,
#Partially deleted in new
chr20	33217326	33227758	chr20:33217326-33227758	3	+	33217536	33227617	789624	7	337,151,108,150,85,64,221,	0,6484,7028,7771,9079,9603,10211,
#Partially deleted in new
chr20	33217326	33227758	chr20:33217326-33227758	0	+	33217326	33217326	8553170	7	337,151,108,150,85,102,221,	0,6484,7028,7771,9079,9565,10211,
#Partially deleted in new
chr20	33217351	33227758	chr20:33217351-33227758	1	+	33217536	33227617	789624	6	312,151,150,85,64,221,	0,6459,7746,9054,9578,10186,
#Deleted in new
chr20	33235994	33243309	chr20:33235994-33243309	1	+	33237711	33242527	0	9	56,175,160,108,153,85,64,75,203,	0,1702,2060,3808,4238,5390,6061,6492,7112,
#Deleted in new
chr20	33235994	33243311	chr20:33235994-33243311	3	+	33237711	33242527	0	9	56,175,160,108,153,85,64,75,150,	0,1702,2060,3808,4238,5390,6061,6492,7167,
#Deleted in new
chr20	33235994	33243309	chr20:33235994-33243309	1	+	33237711	33242527	0	9	56,175,160,108,153,85,64,75,187,	0,1702,2060,3808,4238,5390,6061,6492,7128,
#Deleted in new
chr20	33237711	33243305	chr20:33237711-33243305	1	+	33237711	33242527	0	9	48,70,160,108,153,85,64,75,144,	0,90,343,2091,2521,3673,4344,4775,5450,
#Deleted in new
chr20	33272261	33272657	chr20:33272261-33272657	7	-	33272261	33272261	16724991	1	396,	0,
#Partially deleted in new
chr20	33273479	33291033	chr20:33273479-33291033	0	+	33286073	33291033	789624	5	175,156,142,108,77,	0,12553,15261,16405,17477,
#Partially deleted in new
chr20	33283134	33309878	chr20:33283134-33309878	3	+	33286073	33309767	789624	16	120,156,142,108,150,82,64,86,180,54,159,68,46,64,77,171,	0,2898,5606,6750,7822,8772,14390,16764,18098,19224,19781,20823,21711,22867,23776,26573,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	33298712	33307966	chr20:33298712-33307966	0	+	33298712	33298712	8553170	13	132,157,86,180,54,134,159,68,46,64,83,77,693,	0,358,1186,2520,3646,3902,4203,5245,6133,7289,7890,8198,8561,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	33316868	33329969	chr20:33316868-33329969	7	+	33316868	33316868	16724991	10	107,213,105,139,23,182,153,62,39,76,	0,1180,3130,4901,6455,6906,8833,10426,12655,13025,
#Partially deleted in new
chr20	33347719	33354444	chr20:33347719-33354444	7	+	33347719	33347719	16724991	6	256,490,102,147,122,61,	0,1608,2446,4918,6229,6664,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	33350862	33354060	chr20:33350862-33354060	4	+	33350862	33350862	16724991	2	249,296,	0,2902,
#Partially deleted in new
chr20	33358838	33401561	chr20:33358838-33401561	1	-	33359042	33397064	789624	13	285,141,150,131,56,98,121,211,101,35,104,324,134,	0,1512,8020,11660,13803,15276,26811,28484,33303,35193,36174,37922,42589,
#Partially deleted in new
chr20	33358838	33401561	chr20:33358838-33401561	3	-	33359042	33397064	789624	14	285,141,150,131,56,98,231,121,211,101,35,104,324,134,	0,1512,8020,11660,13803,15276,20622,26811,28484,33303,35193,36174,37922,42589,
#Partially deleted in new
chr20	33358838	33387533	chr20:33358838-33387533	0	-	33359042	33387533	789624	6	285,141,150,131,56,211,	0,1512,8020,11660,13803,28484,
#Partially deleted in new
chr20	33358838	33401517	chr20:33358838-33401517	1	-	33359042	33396794	789624	14	285,141,150,131,56,98,231,121,211,101,35,104,176,90,	0,1512,8020,11660,13803,15276,20622,26811,28484,33303,35193,36174,37922,42589,
#Partially deleted in new
chr20	33358838	33401479	chr20:33358838-33401479	0	-	33358838	33358838	8553170	8	285,141,147,131,56,98,35,52,	0,1512,8020,11660,13803,15276,35193,42589,
#Partially deleted in new
chr20	33358838	33401504	chr20:33358838-33401504	0	-	33358838	33358838	8553170	6	285,141,150,131,56,77,	0,1512,8020,11660,13803,42589,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	33358840	33373359	chr20:33358840-33373359	0	-	33358840	33358840	8553170	4	1651,150,131,718,	0,8018,11658,13801,
#Partially deleted in new
chr20	33358844	33387504	chr20:33358844-33387504	0	-	33358844	33358844	8553170	4	243,231,121,182,	0,20616,26805,28478,
#Partially deleted in new
chr20	33360350	33401478	chr20:33360350-33401478	0	-	33360350	33360350	8553170	7	141,150,131,56,98,231,51,	0,6508,10148,12291,13764,19110,41077,
#Partially deleted in new
chr20	33366907	33401508	chr20:33366907-33401508	0	-	33366907	33366907	8553170	5	101,131,121,101,81,	0,3591,18742,25234,34520,
#Partially deleted in new
chr20	33370498	33401452	chr20:33370498-33401452	0	-	33370498	33370498	8553170	7	131,56,98,231,121,101,25,	0,2143,3616,8962,15151,21643,30929,
#Partially deleted in new
chr20	33373600	33379588	chr20:33373600-33379588	0	-	33373600	33373600	8553170	2	612,128,	0,5860,
#Partially deleted in new
chr20	33374114	33401505	chr20:33374114-33401505	0	-	33374114	33374114	8553170	8	98,231,121,211,101,35,104,78,	0,5346,11535,13208,18027,19917,20898,27313,
#Partially deleted in new
chr20	33379460	33401486	chr20:33379460-33401486	0	-	33379460	33379460	8553170	6	231,121,211,101,35,59,	0,6189,7862,12681,14571,21967,
#Partially deleted in new
chr20	33379512	33401523	chr20:33379512-33401523	0	-	33379512	33379512	8553170	5	179,121,211,101,96,	0,6137,7810,12629,21915,
#Partially deleted in new
chr20	33407954	33443892	chr20:33407954-33443892	3	-	33408506	33443620	789624	8	645,188,197,131,208,205,186,582,	0,746,2180,4341,4620,9764,30886,35356,
#Partially deleted in new
chr20	33490074	33618546	chr20:33490074-33618546	0	+	33490074	33490074	8553170	4	227,144,242,99,	0,116881,121019,128373,
#Partially deleted in new
chr20	33490086	33645541	chr20:33490086-33645541	3	+	33490267	33644646	789624	11	215,144,242,90,182,254,86,196,69,191,1195,	0,116869,121007,129430,133028,134677,138263,139632,146553,150254,154260,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	33490116	33650036	chr20:33490116-33650036	1	+	33574200	33644646	789624	12	185,288,144,242,90,182,254,86,196,69,191,5690,	0,83857,116839,120977,129400,132998,134647,138233,139602,146523,150224,154230,
#Partially deleted in new
chr20	33562333	33623954	chr20:33562333-33623954	1	+	33606981	33623932	789624	6	341,144,242,90,182,182,	0,44622,48760,57183,60781,61439,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	33562364	33650031	chr20:33562364-33650031	1	+	33574200	33644646	789624	12	310,288,144,242,90,182,254,86,196,69,191,5685,	0,11609,44591,48729,57152,60750,62399,65985,67354,74275,77976,81982,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	33562364	33650031	chr20:33562364-33650031	1	+	33606981	33644646	789624	11	310,144,242,90,182,254,86,196,69,191,5685,	0,44591,48729,57152,60750,62399,65985,67354,74275,77976,81982,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	33562379	33650036	chr20:33562379-33650036	1	+	33606981	33644646	789624	13	295,288,76,144,242,90,182,254,86,196,69,191,5690,	0,11594,39450,44576,48714,57137,60735,62384,65970,67339,74260,77961,81967,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	33600335	33650036	chr20:33600335-33650036	1	+	33600374	33644646	789624	11	130,144,242,90,182,254,86,196,69,191,5690,	0,6620,10758,19181,22779,24428,28014,29383,36304,40005,44011,
#Partially deleted in new
chr20	33619564	33636662	chr20:33619564-33636662	0	+	33619564	33619564	8553170	7	42,182,82,254,86,196,23,	0,3550,4208,5199,8785,10154,17075,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	33638738	33646690	chr20:33638738-33646690	1	+	33640372	33644646	789624	3	970,188,2344,	0,1605,5608,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	33655700	33656423	chr20:33655700-33656423	3	-	33655700	33655700	8553170	1	723,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	33657086	33674408	chr20:33657086-33674408	3	-	33657828	33674352	789624	12	771,92,78,113,236,119,137,98,26,109,25,185,	0,855,1390,1635,2410,2798,3172,12288,12600,13597,15311,17137,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	33657086	33674463	chr20:33657086-33674463	1	-	33657828	33674352	789624	13	771,92,78,113,54,80,119,137,98,26,109,25,240,	0,855,1390,1635,2410,2566,2798,3172,12288,12600,13597,15311,17137,
#Partially deleted in new
chr20	33657086	33659547	chr20:33657086-33659547	0	-	33657086	33657086	8553170	6	60,68,92,78,113,51,	0,703,855,1390,1635,2410,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	33657087	33674420	chr20:33657087-33674420	0	-	33670770	33674352	789624	12	770,92,78,113,54,80,511,98,26,98,25,197,	0,854,1389,1634,2409,2565,2797,12287,12599,13596,15310,17136,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	33657087	33662778	chr20:33657087-33662778	0	-	33657087	33657087	8553170	9	770,92,78,113,54,80,119,137,567,	0,854,1389,1634,2409,2565,2797,3171,5124,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	33657563	33662419	chr20:33657563-33662419	0	-	33657563	33657563	8553170	8	294,92,78,113,236,119,137,208,	0,378,913,1158,1933,2321,2695,4648,
#Partially deleted in new
chr20	33657636	33674389	chr20:33657636-33674389	0	-	33660003	33674352	789624	13	221,92,78,113,54,80,174,137,98,26,109,25,166,	0,305,840,1085,1860,2016,2248,2622,11738,12050,13047,14761,16587,
#Partially deleted in new
chr20	33657676	33663719	chr20:33657676-33663719	0	-	33657676	33657676	8553170	9	181,92,78,113,80,119,137,30,186,	0,265,800,1045,1976,2208,2582,4535,5857,
#Partially deleted in new
chr20	33657729	33662237	chr20:33657729-33662237	0	-	33657729	33657729	8553170	9	128,92,78,113,54,80,119,137,26,	0,212,747,992,1767,1923,2155,2529,4482,
#Partially deleted in new
chr20	33657756	33669428	chr20:33657756-33669428	0	-	33657756	33657756	8553170	9	101,92,78,113,54,80,150,137,54,	0,185,720,965,1740,1896,2128,2502,11618,
#Partially deleted in new
chr20	33657944	33662184	chr20:33657944-33662184	0	-	33657944	33657944	8553170	7	89,78,113,80,119,137,150,	0,532,777,1708,1940,2314,4090,
#Partially deleted in new
chr20	33657961	33666659	chr20:33657961-33666659	0	-	33657961	33659712	789624	8	72,78,113,54,80,119,137,79,	0,515,760,1535,1691,1923,2297,8619,
#Partially deleted in new
chr20	33658479	33674359	chr20:33658479-33674359	0	-	33658479	33674352	789624	10	75,95,80,119,137,98,26,109,25,136,	0,242,1173,1405,1779,10895,11207,12204,13918,15744,
#Partially deleted in new
chr20	33658522	33674409	chr20:33658522-33674409	0	-	33658522	33674352	789624	10	32,113,80,119,137,98,26,109,25,186,	0,199,1130,1362,1736,10852,11164,12161,13875,15701,
#Partially deleted in new
chr20	33658526	33674408	chr20:33658526-33674408	0	-	33659889	33674352	789624	11	28,113,54,80,114,137,98,26,109,25,185,	0,195,970,1126,1358,1732,10848,11160,12157,13871,15697,
#Partially deleted in new
chr20	33659658	33662423	chr20:33659658-33662423	0	-	33659658	33659658	8553170	4	74,174,137,212,	0,226,600,2553,
#Partially deleted in new
chr20	33659884	33674366	chr20:33659884-33674366	0	-	33670698	33674352	789624	7	119,137,98,26,77,25,143,	0,374,9490,9802,10799,12513,14339,
#Partially deleted in new
chr20	33659926	33666702	chr20:33659926-33666702	0	-	33659926	33659926	8553170	2	469,122,	0,6654,
#Partially deleted in new
chr20	33660250	33674420	chr20:33660250-33674420	0	-	33660250	33660250	8553170	6	145,338,208,109,25,197,	0,9124,9963,10433,12147,13973,
#Partially deleted in new
chr20	33662283	33663914	chr20:33662283-33663914	3	+	33662345	33663867	789624	2	188,383,	0,1248,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	33663365	33665619	chr20:33663365-33665619	0	+	33663365	33663365	8553170	1	2254,	0,
#Deleted in new
chr20	33666497	33668525	chr20:33666497-33668525	3	+	33667497	33668235	789624	1	2028,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	33669142	33670765	chr20:33669142-33670765	0	-	33669293	33670765	789624	3	330,26,82,	0,544,1541,
#Deleted in new
chr20	33669447	33674420	chr20:33669447-33674420	0	-	33669447	33669447	8553170	4	265,109,25,197,	0,1236,2950,4776,
#Deleted in new
chr20	33672033	33674388	chr20:33672033-33674388	0	-	33672033	33672033	8553170	2	389,165,	0,2190,
#Deleted in new
chr20	33674516	33675380	chr20:33674516-33675380	3	+	33674516	33674516	8553170	2	311,129,	0,735,
#Partially deleted in new
chr20	33675682	33686404	chr20:33675682-33686404	3	-	33676731	33686264	0	7	1297,226,115,153,220,91,401,	0,1422,1743,2518,4072,4643,10321,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	33702753	33720300	chr20:33702753-33720300	3	-	33707705	33720207	789624	4	5216,199,63,206,	0,7801,11920,17341,
#Partially deleted in new
chr20	33707268	33720319	chr20:33707268-33720319	1	-	33707929	33720207	789624	3	701,63,225,	0,7405,12826,
#Partially deleted in new
chr20	33707488	33720310	chr20:33707488-33720310	1	-	33707929	33720207	789624	4	481,219,63,216,	0,3066,7185,12606,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	33728930	33731828	chr20:33728930-33731828	3	-	33728930	33728930	8553170	2	231,170,	0,2728,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr20	33731656	33792269	chr20:33731656-33792269	3	+	33732021	33791517	789624	15	396,111,197,150,252,175,91,194,191,209,97,133,112,71,1282,	0,9245,13446,17266,21515,25491,27059,30205,35194,38427,49634,52075,57206,57861,59331,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr20	33731759	33792269	chr20:33731759-33792269	1	+	33732021	33791517	789624	15	293,111,197,150,252,196,91,194,191,209,97,133,112,71,1282,	0,9142,13343,17163,21412,25388,26956,30102,35091,38324,49531,51972,57103,57758,59228,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	33732001	33792269	chr20:33732001-33792269	0	+	33732021	33748999	789624	14	51,111,150,252,196,91,194,191,209,97,133,112,71,1282,	0,8900,16921,21170,25146,26714,29860,34849,38082,49289,51730,56861,57516,58986,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	33732009	33792269	chr20:33732009-33792269	0	+	33732021	33788922	789624	14	43,111,197,150,252,196,91,194,191,209,133,112,71,1282,	0,8892,13093,16913,21162,25138,26706,29852,34841,38074,51722,56853,57508,58978,
#Partially deleted in new
chr20	33752166	33752543	chr20:33752166-33752543	7	-	33752166	33752166	16724991	1	377,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	33787087	33792269	chr20:33787087-33792269	0	+	33787087	33787087	8553170	3	1887,71,1282,	0,2430,3900,
#Partially deleted in new
chr20	33787372	33793027	chr20:33787372-33793027	0	-	33787372	33787372	8553170	2	405,59,	0,5596,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	33787374	33811097	chr20:33787374-33811097	3	-	33787374	33787374	789624	4	403,103,78,58,	0,8139,10543,23665,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	33787446	33811074	chr20:33787446-33811074	0	-	33787446	33787446	8553170	4	211,103,78,35,	0,8067,10471,23593,
#Partially deleted in new
chr20	33811303	33854366	chr20:33811303-33854366	3	+	33811468	33853560	0	5	355,178,115,127,871,	0,37163,39648,40773,42192,
#Partially deleted in new
chr20	33912322	33913336	chr20:33912322-33913336	7	-	33912322	33912322	16724991	2	434,289,	0,725,
#Deleted in new
chr20	33965161	33965576	chr20:33965161-33965576	7	+	33965161	33965161	16724991	1	415,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	33980686	33993134	chr20:33980686-33993134	3	-	33980686	33980686	8553170	2	2910,1360,	0,11088,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	33983051	33993124	chr20:33983051-33993124	0	-	33983051	33983051	8553170	2	545,65,	0,10008,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	33985616	33991818	chr20:33985616-33991818	1	-	33985616	33985616	8553170	2	4397,44,	0,6158,
#Deleted in new
chr20	33992487	33994357	chr20:33992487-33994357	0	-	33992487	33992487	789624	2	418,153,	0,1717,
#Deleted in new
chr20	33992487	33994355	chr20:33992487-33994355	1	-	33992487	33992487	789624	3	418,91,151,	0,572,1717,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	33993645	34084884	chr20:33993645-34084884	1	+	34072074	34078549	0	9	486,83,265,73,167,114,218,49,4975,	0,37876,78420,79917,82228,83056,83382,84859,86264,
#Partially deleted in new
chr20	33993679	34076039	chr20:33993679-34076039	0	+	34072074	34076039	789624	7	452,83,117,265,73,48,166,	0,37842,71364,78386,79883,80139,82194,
#Partially deleted in new
chr20	33993721	34080271	chr20:33993721-34080271	3	+	34072074	34078549	0	10	410,83,265,73,48,167,114,218,49,362,	0,37800,78344,79841,80097,82152,82980,83306,84783,86188,
#Partially deleted in new
chr20	33993801	34073574	chr20:33993801-34073574	0	+	34072074	34073574	789624	5	330,83,76,265,12,	0,37720,39362,78264,79761,
#Partially deleted in new
chr20	33993952	34077082	chr20:33993952-34077082	0	+	34072074	34077082	789624	7	179,83,140,48,167,114,55,	0,37569,78113,79866,81921,82749,83075,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	34014968	34017749	chr20:34014968-34017749	3	-	34014968	34014968	8553170	3	139,141,323,	0,1489,2458,
#Partially deleted in new
chr20	34029860	34077129	chr20:34029860-34077129	0	+	34072074	34077129	789624	7	67,83,265,73,167,114,102,	0,1661,42205,43702,46013,46841,47167,
#Deleted in new
chr20	34049118	34049190	chr20:34049118-34049190	3	+	34049118	34049118	5263520	1	72,	0,
#Deleted in new
chr20	34072065	34077046	chr20:34072065-34077046	0	+	34072065	34072065	8553170	5	140,73,167,114,19,	0,1497,3808,4636,4962,
#Deleted in new
chr20	34073609	34076229	chr20:34073609-34076229	0	+	34073609	34073609	8553170	3	26,48,356,	0,209,2264,
#Deleted in new
chr20	34076695	34077680	chr20:34076695-34077680	0	+	34076695	34076695	8553170	2	120,653,	0,332,
#Partially deleted in new
chr20	34077212	34108308	chr20:34077212-34108308	0	+	34077212	34077212	8553170	3	33,49,145,	0,1292,30951,
#Partially deleted in new
chr20	34088297	34112332	chr20:34088297-34112332	3	-	34089729	34112110	789624	9	1608,86,57,149,101,136,104,178,237,	0,2219,5377,8359,9118,10200,15164,17070,23798,
#Deleted in new
chr20	34122469	34123290	chr20:34122469-34123290	7	+	34122469	34122469	16724991	1	821,	0,
#Partially deleted in new
chr20	34194568	34269176	chr20:34194568-34269176	3	+	34260374	34269167	0	4	192,170,62,186,	0,65796,68263,74422,
#Deleted in new
chr20	34213494	34215892	chr20:34213494-34215892	7	-	34213494	34213494	16724991	1	2398,	0,
#Deleted in new
chr20	34245952	34246537	chr20:34245952-34246537	7	-	34245952	34245952	16724991	1	585,	0,
#Partially deleted in new
chr20	34260364	34269344	chr20:34260364-34269344	1	+	34260374	34269167	0	3	170,62,354,	0,2467,8626,
#Partially deleted in new
chr20	34280267	34303348	chr20:34280267-34303348	3	-	34281033	34303270	0	10	898,195,118,88,208,113,150,76,191,106,	0,5172,10064,10283,10463,11151,12090,13813,15127,22975,
#Partially deleted in new
chr20	34280269	34303317	chr20:34280269-34303317	0	-	34280269	34280269	8553170	9	896,195,307,208,113,150,76,191,75,	0,5170,10062,10461,11149,12088,13811,15125,22973,
#Partially deleted in new
chr20	34280269	34311802	chr20:34280269-34311802	1	-	34281033	34295529	0	10	896,195,118,88,208,113,150,76,191,331,	0,5170,10062,10281,10461,11149,12088,13811,15125,31202,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	34281631	34286466	chr20:34281631-34286466	3	-	34281631	34281631	8553170	2	147,439,	0,4396,
#Partially deleted in new
chr20	34291464	34301948	chr20:34291464-34301948	0	-	34291464	34291464	8553170	5	67,150,76,191,191,	0,893,2616,3930,10293,
#Partially deleted in new
chr20	34293465	34303357	chr20:34293465-34303357	0	-	34293465	34293465	8553170	3	691,364,115,	0,1756,9777,
#Partially deleted in new
chr20	34295428	34302675	chr20:34295428-34302675	0	-	34295428	34295428	8553170	2	157,331,	0,6916,
#Deleted in new
chr20	34347670	34347785	chr20:34347670-34347785	7	-	34347670	34347670	16724991	1	115,	0,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr20	34363234	34511393	chr20:34363234-34511393	3	+	34393811	34507794	0	25	115,77,91,142,125,138,46,158,190,96,175,70,85,129,73,72,89,160,134,141,121,105,97,73,3699,	0,6159,30556,45416,49280,50507,61245,75239,76920,78973,82052,86176,94155,98858,106813,108209,114537,116395,117364,117831,126031,126587,129266,141096,144460,
#Partially deleted in new
chr20	34363240	34413879	chr20:34363240-34413879	0	+	34393811	34413879	789624	6	109,77,112,142,125,138,	0,6153,30529,45410,49274,50501,
#Partially deleted in new
chr20	34363275	34508115	chr20:34363275-34508115	1	+	34412632	34507794	0	24	74,77,91,125,138,46,158,190,96,175,70,85,129,73,72,89,160,134,141,121,105,97,73,421,	0,6118,30515,49239,50466,61204,75198,76879,78932,82011,86135,94114,98817,106772,108168,114496,116354,117323,117790,125990,126546,129225,141055,144419,
#Partially deleted in new
chr20	34363294	34369543	chr20:34363294-34369543	0	+	34363294	34363294	8553170	2	55,150,	0,6099,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr20	34363311	34508035	chr20:34363311-34508035	1	+	34393811	34507794	0	26	38,77,91,142,125,138,123,46,158,190,96,175,70,85,129,73,72,89,160,134,141,121,105,97,73,341,	0,6082,30479,45339,49203,50430,53805,61168,75162,76843,78896,81975,86099,94078,98781,106736,108132,114460,116318,117287,117754,125954,126510,129189,141019,144383,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	34384164	34384265	chr20:34384164-34384265	3	-	34384164	34384164	8553170	1	101,	0,
#Partially deleted in new
chr20	34402148	34402696	chr20:34402148-34402696	7	-	34402148	34402148	16724991	1	548,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	34441591	34442025	chr20:34441591-34442025	3	-	34441591	34441591	8553170	2	104,195,	0,239,
#Partially deleted in new
chr20	34445360	34481176	chr20:34445360-34481176	0	+	34445360	34445360	8553170	10	101,70,85,129,73,72,135,160,134,111,	0,4050,12029,16732,24687,26083,32411,34269,35238,35705,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	34450929	34454552	chr20:34450929-34454552	3	+	34450929	34450929	8553170	2	70,138,	0,3485,
#Deleted in new
chr20	34466324	34466418	chr20:34466324-34466418	3	+	34466324	34466324	5263520	1	94,	0,
#Partially deleted in new
chr20	34471500	34481182	chr20:34471500-34481182	0	+	34471500	34479704	789624	5	15,89,95,134,117,	0,6271,8194,9098,9565,
#Deleted in new
chr20	34475923	34476474	chr20:34475923-34476474	7	-	34475923	34475923	16724991	1	551,	0,
#Deleted in new
chr20	34476204	34476787	chr20:34476204-34476787	3	+	34476204	34476204	8553170	1	583,	0,
#Partially deleted in new
chr20	34516408	34540958	chr20:34516408-34540958	3	+	34516458	34540624	0	4	53,76,168,378,	0,9859,18219,24172,
#Partially deleted in new
chr20	34516413	34540958	chr20:34516413-34540958	0	+	34516413	34516413	8553170	5	48,76,383,168,378,	0,9854,13438,18214,24167,
#Partially deleted in new
chr20	34516443	34531221	chr20:34516443-34531221	1	+	34516458	34529916	0	3	18,76,1370,	0,9824,13408,
#Partially deleted in new
chr20	34516454	34540958	chr20:34516454-34540958	1	+	34516717	34540624	789624	4	422,76,168,378,	0,9813,18173,24126,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	34526509	34526606	chr20:34526509-34526606	3	-	34526509	34526509	8553170	1	97,	0,
#Partially deleted in new
chr20	34546853	34560345	chr20:34546853-34560345	1	+	34549977	34559898	0	5	63,125,56,107,610,	0,3051,12354,12493,12882,
#Deleted in new
chr20	34558107	34560345	chr20:34558107-34560345	3	+	34558868	34559898	0	4	801,56,107,610,	0,1100,1239,1628,
#Deleted in new
chr20	34558717	34560345	chr20:34558717-34560345	1	+	34558868	34559898	0	5	191,56,107,170,174,	0,490,629,1018,1454,
#Deleted in new
chr20	34558774	34560345	chr20:34558774-34560345	0	+	34558774	34558774	8553170	3	134,107,610,	0,572,961,
#Partially deleted in new
chr20	34560541	34677085	chr20:34560541-34677085	2	-	34560865	34677085	789624	12	438,143,125,144,155,98,101,110,63,60,65,130,	0,14562,21006,24895,27911,55500,74073,77334,83622,84733,96638,116414,
#Partially deleted in new
chr20	34560865	34677085	chr20:34560865-34677085	1	-	34560865	34677085	789624	11	114,143,125,144,155,98,101,110,63,65,130,	0,14238,20682,24571,27587,55176,73749,77010,83298,96314,116090,
#Partially deleted in new
chr20	34560902	34616093	chr20:34560902-34616093	0	-	34560902	34616093	789624	6	77,143,125,44,68,52,	0,14201,20645,24534,27637,55139,
#Partially deleted in new
chr20	34579018	34634703	chr20:34579018-34634703	0	-	34579018	34579018	8553170	4	375,125,155,89,	0,2529,9434,55596,
#Partially deleted in new
chr20	34616041	34698790	chr20:34616041-34698790	0	-	34616041	34616041	8553170	7	98,101,110,63,60,65,96,	0,18573,21834,28122,29233,41138,82653,
#Partially deleted in new
chr20	34643566	34677090	chr20:34643566-34677090	0	-	34643566	34643566	8553170	4	660,60,65,135,	0,1708,13613,33389,
#Deleted in new
chr20	34688687	34688978	chr20:34688687-34688978	7	+	34688687	34688687	16724991	1	291,	0,
#Partially deleted in new
chr20	34689096	34698803	chr20:34689096-34698803	0	-	34689096	34689096	8553170	3	464,103,109,	0,998,9598,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	34696917	34714628	chr20:34696917-34714628	0	-	34696917	34696917	8553170	3	326,154,39,	0,1777,17672,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	34697140	34715156	chr20:34697140-34715156	0	-	34697140	34697140	8553170	3	106,154,567,	0,1554,17449,
#Partially deleted in new
chr20	34697140	34749582	chr20:34697140-34749582	0	-	34697140	34749582	789624	6	103,149,37,69,122,180,	0,30118,35418,39549,49666,52262,
#Partially deleted in new
chr20	34704289	34713439	chr20:34704289-34713439	3	+	34708739	34710307	789624	5	223,117,173,289,3382,	0,1068,4401,4946,5768,
#Partially deleted in new
chr20	34704338	34713439	chr20:34704338-34713439	1	+	34708739	34710307	789624	4	174,173,289,3382,	0,4352,4897,5719,
#Partially deleted in new
chr20	34704349	34709496	chr20:34704349-34709496	0	+	34708739	34709496	789624	3	163,173,141,	0,4341,5006,
#Partially deleted in new
chr20	34704734	34709343	chr20:34704734-34709343	0	+	34708739	34709343	789624	4	44,117,173,108,	0,623,3956,4501,
#Partially deleted in new
chr20	34714773	34825649	chr20:34714773-34825649	3	-	34715321	34782355	789624	15	592,149,37,69,2979,122,1117,147,885,129,123,156,284,114,178,	0,12485,17785,21916,25589,32033,34629,39948,42446,44031,53690,61519,67347,77676,110698,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr20	34714773	34821639	chr20:34714773-34821639	1	-	34715321	34782355	789624	16	592,149,37,69,2979,122,1117,147,885,129,123,156,284,114,70,2338,	0,12485,17785,21916,25589,32033,34629,39948,42446,44031,53690,61519,67347,77676,94679,104528,
#Partially deleted in new
chr20	34714774	34825630	chr20:34714774-34825630	1	-	34715321	34782355	789624	14	591,149,37,69,122,1117,147,885,129,123,156,284,114,159,	0,12484,17784,21915,32032,34628,39947,42445,44030,53689,61518,67346,77675,110697,
#Partially deleted in new
chr20	34715066	34732968	chr20:34715066-34732968	0	-	34715066	34715066	8553170	3	299,149,410,	0,12192,17492,
#Partially deleted in new
chr20	34738897	34825630	chr20:34738897-34825630	1	-	34738897	34782355	789624	11	35,122,1117,147,885,129,123,156,284,114,159,	0,7909,10505,15824,18322,19907,29566,37395,43223,53552,86574,
#Partially deleted in new
chr20	34833574	34834462	chr20:34833574-34834462	7	-	34833574	34833574	16724991	2	405,168,	0,720,
#Partially deleted in new
chr20	34844719	34872860	chr20:34844719-34872860	3	-	34845327	34872815	789624	15	772,100,138,118,150,89,128,88,197,74,68,118,152,236,214,	0,5241,6511,7435,7669,9811,10076,12086,14723,15249,15534,16725,18094,18593,27927,
#Partially deleted in new
chr20	34845012	34852481	chr20:34845012-34852481	0	-	34850812	34852481	789624	6	479,100,136,138,118,93,	0,4948,5769,6218,7142,7376,
#Partially deleted in new
chr20	34850026	34852272	chr20:34850026-34852272	0	-	34850188	34852272	789624	3	171,138,118,	0,1204,2128,
#Partially deleted in new
chr20	34862813	34872822	chr20:34862813-34872822	0	-	34862813	34872815	789624	4	152,236,51,176,	0,499,866,9833,
#Partially deleted in new
chr20	34872145	34882990	chr20:34872145-34882990	0	+	34872145	34872145	8553170	2	258,197,	0,10648,
#Partially deleted in new
chr20	34872881	34913810	chr20:34872881-34913810	0	+	34872881	34872881	8553170	5	120,196,92,104,58,	0,9912,40214,40511,40871,
#Partially deleted in new
chr20	34874941	34913822	chr20:34874941-34913822	0	+	34875099	34913822	789624	5	186,196,92,104,70,	0,7852,38154,38451,38811,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	34874941	34908903	chr20:34874941-34908903	0	+	34874941	34874941	8553170	3	196,196,188,	0,7852,33774,
#Partially deleted in new
chr20	34874962	34927962	chr20:34874962-34927962	0	+	34875099	34882869	789624	18	175,196,92,104,73,76,115,138,171,134,133,57,81,109,69,177,75,876,	0,7831,38133,38430,38790,39133,39360,44472,45576,46043,46367,46581,46823,48360,50735,51142,51914,52124,
#Partially deleted in new
chr20	34874978	34920613	chr20:34874978-34920613	0	+	34875099	34919435	789624	4	149,196,138,75,	0,7815,44456,45560,
#Partially deleted in new
chr20	34875016	34882996	chr20:34875016-34882996	0	+	34875016	34875016	8553170	3	121,79,203,	0,836,7777,
#Partially deleted in new
chr20	34876434	34927962	chr20:34876434-34927962	3	+	34876645	34927214	789624	18	389,196,92,104,73,76,115,138,171,134,133,57,81,109,69,177,75,876,	0,6359,36661,36958,37318,37661,37888,43000,44104,44571,44895,45109,45351,46888,49263,49670,50442,50652,
#Partially deleted in new
chr20	34876571	34913188	chr20:34876571-34913188	0	+	34876645	34913188	789624	3	252,172,93,	0,6246,36524,
#Partially deleted in new
chr20	34876579	34913503	chr20:34876579-34913503	0	+	34876645	34882874	789624	4	168,196,92,111,	0,6214,36516,36813,
#Partially deleted in new
chr20	34876589	34913496	chr20:34876589-34913496	0	+	34876645	34913496	789624	5	234,196,39,92,104,	0,6204,32315,36506,36803,
#Partially deleted in new
chr20	34876589	34927962	chr20:34876589-34927962	0	+	34876645	34919435	789624	13	234,196,138,171,134,133,57,81,109,69,177,75,876,	0,6204,42845,43949,44416,44740,44954,45196,46733,49108,49515,50287,50497,
#Partially deleted in new
chr20	34876592	34926938	chr20:34876592-34926938	0	+	34876645	34926116	789624	6	231,196,109,69,177,62,	0,6201,46730,49105,49512,50284,
#Partially deleted in new
chr20	34876611	34913949	chr20:34876611-34913949	0	+	34876611	34876611	8553170	3	212,196,96,	0,6182,37242,
#Partially deleted in new
chr20	34876613	34927962	chr20:34876613-34927962	1	+	34876645	34927214	789624	19	210,196,92,104,73,76,115,39,138,171,134,133,57,81,109,69,177,75,876,	0,6180,36482,36779,37139,37482,37709,38604,42821,43925,44392,44716,44930,45172,46709,49084,49491,50263,50473,
#Partially deleted in new
chr20	34876621	34927962	chr20:34876621-34927962	0	+	34876621	34876621	8553170	6	202,196,109,69,75,876,	0,6172,46701,49076,50255,50465,
#Partially deleted in new
chr20	34882826	34913805	chr20:34882826-34913805	0	+	34882826	34882826	8553170	4	163,86,56,53,	0,30269,30614,30926,
#Partially deleted in new
chr20	34913092	34919572	chr20:34913092-34919572	0	+	34913092	34913092	8553170	6	95,104,73,22,115,138,	0,300,660,1003,1230,6342,
#Partially deleted in new
chr20	34913902	34920709	chr20:34913902-34920709	0	+	34913902	34913902	8553170	4	269,115,138,171,	0,420,5532,6636,
#Partially deleted in new
chr20	34920531	34926276	chr20:34920531-34926276	0	+	34920531	34920531	8553170	8	178,134,133,57,81,109,69,172,	0,474,798,1012,1254,2791,5166,5573,
#Deleted in new
chr20	34920948	34921418	chr20:34920948-34921418	0	+	34920948	34920948	8553170	2	191,89,	0,381,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	34921647	34922366	chr20:34921647-34922366	0	+	34921647	34921647	8553170	2	219,404,	0,315,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	34922841	34927205	chr20:34922841-34927205	0	+	34922841	34922841	8553170	5	590,69,177,75,119,	0,2856,3263,4035,4245,
#Partially deleted in new
chr20	34928432	34955817	chr20:34928432-34955817	1	-	34928827	34951852	0	13	519,190,82,195,67,78,81,117,140,76,146,137,91,	0,968,2903,3506,7143,8330,8510,13280,14055,14498,17520,23291,27294,
#Partially deleted in new
chr20	34928432	34955785	chr20:34928432-34955785	1	-	34928827	34951852	0	10	519,190,82,195,67,78,81,146,137,59,	0,968,2903,3506,7143,8330,8510,17520,23291,27294,
#Partially deleted in new
chr20	34928443	34955783	chr20:34928443-34955783	0	-	34941805	34951852	789624	11	508,190,82,195,78,81,117,76,146,137,57,	0,957,2892,3495,8319,8499,13269,14487,17509,23280,27283,
#Partially deleted in new
chr20	34928472	34955783	chr20:34928472-34955783	1	-	34929185	34951852	789624	13	765,190,82,195,67,78,81,117,140,76,146,137,57,	0,928,2863,3466,7103,8290,8470,13240,14015,14458,17480,23251,27254,
#Partially deleted in new
chr20	34928472	34955778	chr20:34928472-34955778	0	-	34928472	34928472	8553170	10	479,190,82,195,81,117,519,146,137,52,	0,928,2863,3466,8470,13240,14015,17480,23251,27254,
#Partially deleted in new
chr20	34928472	34955643	chr20:34928472-34955643	0	-	34928472	34928472	8553170	12	479,190,82,195,67,78,81,117,519,146,137,928,	0,928,2863,3466,7103,8290,8470,13240,14015,17480,23251,26243,
#Partially deleted in new
chr20	34928478	34956027	chr20:34928478-34956027	3	-	34928827	34951852	0	13	473,190,82,195,67,78,81,117,140,76,146,137,158,	0,922,2857,3460,7097,8284,8464,13234,14009,14452,17474,23245,27391,
#Partially deleted in new
chr20	34928478	34955635	chr20:34928478-34955635	1	-	34928827	34951852	0	13	473,190,82,195,67,78,81,117,140,76,146,137,920,	0,922,2857,3460,7097,8284,8464,13234,14009,14452,17474,23245,26237,
#Partially deleted in new
chr20	34928491	34951762	chr20:34928491-34951762	0	-	34928491	34928491	8553170	10	460,190,82,195,78,81,117,519,146,39,	0,909,2844,3447,8271,8451,13221,13996,17461,23232,
#Partially deleted in new
chr20	34928570	34937009	chr20:34928570-34937009	0	-	34928931	34937009	789624	6	381,82,195,67,78,67,	0,2765,3368,7005,8192,8372,
#Partially deleted in new
chr20	34928599	34942980	chr20:34928599-34942980	0	-	34928827	34942980	789624	10	352,190,82,195,67,78,81,117,98,50,	0,801,2736,3339,6976,8163,8343,13113,13888,14331,
#Partially deleted in new
chr20	34928749	34946729	chr20:34928749-34946729	0	-	34928749	34928749	8553170	11	202,190,82,195,67,78,81,117,519,146,103,	0,651,2586,3189,6826,8013,8193,12963,13738,17203,17877,
#Partially deleted in new
chr20	34928805	34955755	chr20:34928805-34955755	0	-	34942988	34951852	789624	13	146,190,82,195,67,78,81,117,140,76,99,137,29,	0,595,2530,3133,6770,7957,8137,12907,13682,14125,17147,22918,26921,
#Partially deleted in new
chr20	34928827	34951852	chr20:34928827-34951852	1	-	34928827	34951852	0	9	124,190,82,195,67,78,81,146,129,	0,573,2508,3111,6748,7935,8115,17125,22896,
#Partially deleted in new
chr20	34928974	34955788	chr20:34928974-34955788	0	-	34936975	34951852	789624	10	616,82,195,67,78,81,76,146,137,62,	0,2361,2964,6601,7788,7968,13956,16978,22749,26752,
#Partially deleted in new
chr20	34929091	34931583	chr20:34929091-34931583	0	-	34929091	34929091	8553170	2	499,248,	0,2244,
#Partially deleted in new
chr20	34929404	34942578	chr20:34929404-34942578	0	-	34932033	34942578	789624	7	186,82,195,78,81,117,91,	0,1931,2534,7358,7538,12308,13083,
#Partially deleted in new
chr20	34932012	34946702	chr20:34932012-34946702	0	-	34932012	34932012	8553170	9	121,67,76,81,117,140,76,146,76,	0,3563,4752,4930,9700,10475,10918,13940,14614,
#Partially deleted in new
chr20	34932025	34955756	chr20:34932025-34955756	0	-	34942988	34951852	789624	8	108,78,81,117,140,76,137,30,	0,4737,4917,9687,10462,10905,19698,23701,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	34933595	34955409	chr20:34933595-34955409	0	-	34933595	34933595	8553170	11	554,67,78,81,117,140,76,146,137,277,197,	0,1980,3167,3347,8117,8892,9335,12357,18128,20673,21617,
#Partially deleted in new
chr20	34935613	34951864	chr20:34935613-34951864	0	-	34942608	34951852	789624	7	29,78,81,117,140,146,141,	0,1149,1329,6099,6874,10339,16110,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	34942576	34952843	chr20:34942576-34952843	0	-	34942576	34951852	789624	5	51,76,146,137,177,	0,354,3376,9147,10090,
#Partially deleted in new
chr20	34942625	34955790	chr20:34942625-34955790	0	-	34942625	34942625	8553170	4	381,146,137,64,	0,3327,9098,13101,
#Partially deleted in new
chr20	34942660	34955783	chr20:34942660-34955783	0	-	34942660	34942660	8553170	4	346,99,71,57,	0,3292,9129,13066,
#Partially deleted in new
chr20	34942943	34952317	chr20:34942943-34952317	0	-	34942943	34951852	789624	4	63,146,137,166,	0,3009,8780,9208,
#Partially deleted in new
chr20	34949428	34955783	chr20:34949428-34955783	0	-	34949428	34949428	8553170	3	726,137,57,	0,2295,6298,
#Partially deleted in new
chr20	34951481	34955808	chr20:34951481-34955808	0	-	34951481	34951481	8553170	2	379,82,	0,4245,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	34951761	34955798	chr20:34951761-34955798	0	-	34951761	34951852	789624	3	99,279,72,	0,2507,3965,
#Boundary problem: need 43, got 0, diff 43, mapped 0.0
chr20	34975402	35002437	chr20:34975402-35002437	3	+	34975494	35002188	789624	43	97,49,163,107,144,157,28,97,24,93,64,99,104,139,119,150,171,180,133,77,88,118,124,137,256,243,177,146,91,390,127,119,197,350,125,116,397,126,171,105,96,138,261,	0,2229,2531,3987,4258,5175,5630,7056,9289,9451,9663,10697,11483,11746,12154,12362,12689,14337,14611,14831,15335,15601,17699,17931,18743,19933,20943,21210,21680,21848,22892,23108,23316,23653,24168,24388,24890,25365,25585,25842,26028,26545,26774,
#Partially deleted in new
chr20	34977629	35002436	chr20:34977629-35002436	1	+	34977629	35002188	789624	42	51,163,107,144,157,28,97,24,93,64,99,104,139,119,150,171,180,133,77,88,118,124,137,256,243,177,146,91,390,127,119,197,350,125,116,397,126,171,105,96,138,260,	0,304,1760,2031,2948,3403,4829,7062,7224,7436,8470,9256,9519,9927,10135,10462,12110,12384,12604,13108,13374,15472,15704,16516,17706,18716,18983,19453,19621,20665,20881,21089,21426,21941,22161,22663,23138,23358,23615,23801,24318,24547,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	34977666	34982025	chr20:34977666-34982025	0	+	34977666	34977666	8553170	6	14,163,107,144,157,993,	0,267,1723,1994,2911,3366,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	34980046	34981275	chr20:34980046-34981275	0	+	34980046	34980046	8553170	3	433,157,243,	0,531,986,
#Deleted in new
chr20	34990375	34990497	chr20:34990375-34990497	3	+	34990375	34990375	5263520	1	122,	0,
#Deleted in new
chr20	34990399	34990472	chr20:34990399-34990472	3	-	34990399	34990399	5263520	1	73,	0,
#Deleted in new
chr20	35001244	35002437	chr20:35001244-35002437	0	+	35001244	35002188	789624	3	282,138,261,	0,703,932,
#Deleted in new
chr20	35001244	35002437	chr20:35001244-35002437	0	+	35001244	35002188	789624	3	282,138,279,	0,703,914,
#Deleted in new
chr20	35001244	35002437	chr20:35001244-35002437	0	+	35001244	35002188	789624	4	105,162,138,279,	0,186,703,914,
#Deleted in new
chr20	35001244	35002437	chr20:35001244-35002437	0	+	35001244	35002188	789624	4	105,96,138,279,	0,186,703,914,
#Deleted in new
chr20	35001244	35002437	chr20:35001244-35002437	0	+	35001244	35002196	789624	3	105,96,490,	0,186,703,
#Partially deleted in new
chr20	35002403	35092871	chr20:35002403-35092871	3	-	35003145	35092781	789624	19	880,207,113,109,141,91,84,102,59,132,167,186,208,129,56,58,117,129,258,	0,1006,2054,3291,4031,5146,6260,7783,10604,13604,18786,32719,42101,47462,52572,55110,66892,75642,90210,
#Partially deleted in new
chr20	35002403	35092807	chr20:35002403-35092807	1	-	35003145	35092781	789624	19	880,207,113,109,141,91,84,102,59,132,143,186,208,129,56,58,117,129,194,	0,1006,2054,3291,4031,5146,6260,7783,10604,13604,18786,32719,42101,47462,52572,55110,66892,75642,90210,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	35030316	35030420	chr20:35030316-35030420	3	-	35030316	35030316	8553170	1	104,	0,
#Partially deleted in new
chr20	35115356	35147364	chr20:35115356-35147364	3	-	35115432	35147258	789624	11	577,122,145,125,142,212,126,106,40,111,213,	0,3241,8533,10894,16285,19381,22523,27016,29622,31468,31795,
#Partially deleted in new
chr20	35115363	35147319	chr20:35115363-35147319	1	-	35115432	35147258	789624	10	570,122,145,125,142,212,126,106,40,168,	0,3234,8526,10887,16278,19374,22516,27009,29615,31788,
#Partially deleted in new
chr20	35117135	35117207	chr20:35117135-35117207	3	-	35117135	35117135	8553170	1	72,	0,
#Partially deleted in new
chr20	35172072	35177362	chr20:35172072-35177362	3	+	35172154	35176813	0	4	152,252,279,665,	0,2629,4095,4625,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	35174354	35174919	chr20:35174354-35174919	3	-	35174354	35174354	8553170	1	565,	0,
#Partially deleted in new
chr20	35174731	35215904	chr20:35174731-35215904	0	+	35174731	35215903	789624	4	222,279,129,12,	0,1436,2355,41161,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	35176352	35216240	chr20:35176352-35216240	0	+	35176352	35215903	789624	2	94,348,	0,39540,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	35195305	35195423	chr20:35195305-35195423	7	+	35195305	35195305	16724991	1	118,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	35201744	35278101	chr20:35201744-35278101	0	-	35201744	35201744	8553170	5	656,124,250,141,56,	0,15003,16067,70260,76301,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	35201746	35203288	chr20:35201746-35203288	0	-	35201746	35201746	8553170	1	1542,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	35216461	35278122	chr20:35216461-35278122	0	-	35216461	35216461	8553170	4	410,250,141,114,	0,1350,55543,61547,
#Partially deleted in new
chr20	35217824	35278125	chr20:35217824-35278125	0	-	35217824	35217824	8553170	4	237,111,141,80,	0,18256,54180,60221,
#Deleted in new
chr20	35218008	35218185	chr20:35218008-35218185	7	+	35218008	35218008	16724991	1	177,	0,
#Partially deleted in new
chr20	35224519	35278104	chr20:35224519-35278104	0	-	35224519	35224519	8553170	3	433,141,96,	0,47485,53489,
#Partially deleted in new
chr20	35224743	35278131	chr20:35224743-35278131	0	-	35224743	35224743	8553170	4	209,111,141,86,	0,11337,47261,53302,
#Partially deleted in new
chr20	35225599	35278103	chr20:35225599-35278103	0	-	35225599	35225599	8553170	3	398,141,95,	0,46405,52409,
#Partially deleted in new
chr20	35226653	35277000	chr20:35226653-35277000	3	+	35226738	35274609	789624	9	331,149,117,305,162,215,139,267,2729,	0,20186,25251,27796,37137,40551,43106,44915,47618,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	35256036	35272056	chr20:35256036-35272056	0	-	35256036	35256036	8553170	2	370,52,	0,15968,
#Duplicated in new
chr20	35262726	35264187	chr20:35262726-35264187	3	-	35262726	35262726	8553170	1	1461,	0,
#Partially deleted in new
chr20	35267884	35280043	chr20:35267884-35280043	3	-	35272096	35280043	789624	4	104,141,182,102,	0,4120,11681,12057,
#Partially deleted in new
chr20	35272004	35278103	chr20:35272004-35278103	0	-	35272004	35272004	8553170	3	141,159,95,	0,4151,6004,
#Deleted in new
chr20	35276360	35278027	chr20:35276360-35278027	0	-	35277713	35277929	789624	3	937,543,19,	0,1029,1648,
#Deleted in new
chr20	35277149	35278129	chr20:35277149-35278129	3	-	35277713	35277929	789624	2	783,84,	0,896,
#Deleted in new
chr20	35277341	35278129	chr20:35277341-35278129	1	-	35277713	35277929	789624	2	591,121,	0,667,
#Partially deleted in new
chr20	35278910	35284715	chr20:35278910-35284715	1	-	35279196	35284487	789624	6	296,182,177,176,86,335,	0,655,1031,1743,5265,5470,
#Partially deleted in new
chr20	35278910	35284770	chr20:35278910-35284770	1	-	35279196	35284487	789624	5	296,182,177,317,45,	0,655,1031,5265,5815,
#Partially deleted in new
chr20	35278910	35284985	chr20:35278910-35284985	3	-	35279196	35284487	789624	7	296,182,177,176,86,112,260,	0,655,1031,1743,5265,5470,5815,
#Partially deleted in new
chr20	35278910	35284523	chr20:35278910-35284523	0	-	35280045	35284487	789624	4	296,182,177,143,	0,655,1031,5470,
#Partially deleted in new
chr20	35278910	35284804	chr20:35278910-35284804	0	-	35279984	35284487	789624	6	296,182,177,86,112,79,	0,655,1031,5265,5470,5815,
#Partially deleted in new
chr20	35279739	35284786	chr20:35279739-35284786	0	-	35280045	35284487	789624	5	8,177,176,317,61,	0,202,914,4436,4986,
#Partially deleted in new
chr20	35280073	35284702	chr20:35280073-35284702	0	-	35280073	35280073	8553170	3	45,86,322,	0,4102,4307,
#Partially deleted in new
chr20	35280697	35284985	chr20:35280697-35284985	0	-	35280697	35284487	789624	4	132,86,112,221,	0,3478,3683,4067,
#Deleted in new
chr20	35285250	35285756	chr20:35285250-35285756	3	+	35285250	35285250	789624	2	65,287,	0,219,
#Partially deleted in new
chr20	35285730	35292401	chr20:35285730-35292401	3	-	35286534	35292304	789624	4	2242,125,168,610,	0,2730,3060,6061,
#Partially deleted in new
chr20	35302565	35411963	chr20:35302565-35411963	1	-	35303934	35411963	789624	9	1504,114,78,109,58,100,96,105,24,	0,4100,12122,44598,63991,79360,81472,91526,109374,
#Partially deleted in new
chr20	35302565	35411970	chr20:35302565-35411970	1	-	35303934	35411963	789624	7	1504,114,78,108,96,105,31,	0,4100,12122,79352,81472,91526,109374,
#Partially deleted in new
chr20	35302565	35412031	chr20:35302565-35412031	1	-	35303934	35411963	789624	8	1504,114,78,109,58,73,105,92,	0,4100,12122,44598,63991,71618,91526,109374,
#Partially deleted in new
chr20	35302565	35411973	chr20:35302565-35411973	1	-	35303934	35411963	789624	9	1504,114,109,58,73,108,96,105,34,	0,4100,44598,63991,71618,79352,81472,91526,109374,
#Partially deleted in new
chr20	35302565	35412141	chr20:35302565-35412141	3	-	35303934	35411963	789624	10	1504,114,78,109,58,73,108,96,105,202,	0,4100,12122,44598,63991,71618,79352,81472,91526,109374,
#Partially deleted in new
chr20	35302565	35411958	chr20:35302565-35411958	0	-	35366572	35411958	789624	7	1504,114,78,109,58,105,19,	0,4100,12122,44598,63991,91526,109374,
#Deleted in new
chr20	35302565	35307082	chr20:35302565-35307082	0	-	35302565	35302565	8553170	2	1504,417,	0,4100,
#Partially deleted in new
chr20	35303432	35411960	chr20:35303432-35411960	0	-	35306682	35411960	789624	7	637,114,20,42,96,105,21,	0,3233,11255,78551,80605,90659,108507,
#Partially deleted in new
chr20	35303452	35394203	chr20:35303452-35394203	1	-	35303934	35384124	789624	8	617,114,78,109,58,100,96,112,	0,3213,11235,43711,63104,78473,80585,90639,
#Deleted in new
chr20	35303453	35307055	chr20:35303453-35307055	0	-	35303453	35303453	8553170	3	616,114,71,	0,3212,3531,
#Deleted in new
chr20	35303793	35304656	chr20:35303793-35304656	0	-	35303793	35303793	8553170	2	276,30,	0,833,
#Partially deleted in new
chr20	35303970	35315436	chr20:35303970-35315436	0	-	35303970	35303970	8553170	4	99,114,78,260,	0,2695,10717,11206,
#Partially deleted in new
chr20	35303990	35411973	chr20:35303990-35411973	0	-	35303990	35411963	789624	9	79,114,78,109,58,73,108,105,34,	0,2675,10697,43173,62566,70193,77927,90101,107949,
#Partially deleted in new
chr20	35306449	35347226	chr20:35306449-35347226	0	-	35306449	35306449	8553170	3	330,78,63,	0,8238,40714,
#Partially deleted in new
chr20	35306672	35411970	chr20:35306672-35411970	0	-	35366572	35411963	789624	8	107,78,109,58,108,96,105,31,	0,8015,40491,59884,75245,77365,87419,105267,
#Partially deleted in new
chr20	35306742	35411969	chr20:35306742-35411969	0	-	35306742	35411963	789624	10	37,78,109,58,73,108,96,42,105,30,	0,7945,40421,59814,67441,75175,77295,85493,87349,105197,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	35344109	35411974	chr20:35344109-35411974	1	-	35347070	35411963	789624	7	3163,58,73,108,96,105,35,	0,22447,30074,37808,39928,49982,67830,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	35345715	35347189	chr20:35345715-35347189	0	-	35345715	35345715	8553170	3	708,47,26,	0,985,1448,
#Partially deleted in new
chr20	35346746	35411973	chr20:35346746-35411973	0	-	35386383	35411963	789624	7	526,58,73,108,113,105,34,	0,19810,27437,35171,39530,47345,65193,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	35381917	35410155	chr20:35381917-35410155	0	-	35381917	35381917	8553170	4	108,96,105,101,	0,2120,12174,28137,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	35433028	35435450	chr20:35433028-35435450	3	+	35433028	35433028	8553170	2	135,1599,	0,823,
#Partially deleted in new
chr20	35433346	35438243	chr20:35433346-35438243	1	-	35433908	35437928	789624	2	1437,946,	0,3951,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	35433346	35454746	chr20:35433346-35454746	3	-	35433908	35437928	789624	4	1437,872,156,107,	0,3951,7885,21293,
#Deleted in new
chr20	35453953	35454097	chr20:35453953-35454097	3	-	35453953	35453953	5263520	1	144,	0,
#Partially deleted in new
chr20	35455163	35466204	chr20:35455163-35466204	0	+	35462367	35466204	789624	7	79,71,123,289,57,83,166,	0,3140,4819,7101,8411,10579,10875,
#Partially deleted in new
chr20	35455174	35466054	chr20:35455174-35466054	0	+	35462367	35466054	789624	7	63,71,123,289,57,83,16,	0,3129,4808,7090,8400,10568,10864,
#Partially deleted in new
chr20	35455200	35462304	chr20:35455200-35462304	0	+	35455200	35455200	8553170	4	316,71,123,40,	0,3103,4782,7064,
#Boundary problem: need 35, got 0, diff 35, mapped 0.0
chr20	35455328	35519280	chr20:35455328-35519280	3	+	35462367	35511626	789624	35	423,71,123,289,57,83,166,107,252,97,102,159,179,183,145,147,231,194,128,170,168,135,144,134,139,349,122,121,122,2616,114,156,102,57,7918,	0,2975,4654,6936,8246,10414,10710,11637,11975,14561,16721,17344,18045,18541,20173,21120,22542,23902,24317,24647,35308,35883,38100,39195,41248,42390,43266,44720,46516,47061,52409,52706,53614,54669,56034,
#Partially deleted in new
chr20	35455596	35478066	chr20:35455596-35478066	0	+	35462367	35476494	789624	15	155,123,289,57,83,166,107,252,97,102,159,179,183,147,196,	0,4386,6668,7978,10146,10442,11369,11707,14293,16453,17076,17777,18273,20852,22274,
#Partially deleted in new
chr20	35455723	35470132	chr20:35455723-35470132	1	+	35462367	35470058	789624	10	28,71,123,289,57,83,166,107,252,243,	0,2580,4259,6541,7851,10019,10315,11242,11580,14166,
#Partially deleted in new
chr20	35462264	35478063	chr20:35462264-35478063	0	+	35462367	35478063	789624	14	289,57,83,166,107,252,97,99,159,179,183,145,147,193,	0,1310,3478,3774,4701,5039,7625,9788,10408,11109,11605,13237,14184,15606,
#Deleted in new
chr20	35465763	35467316	chr20:35465763-35467316	0	+	35465763	35465763	8553170	4	62,166,107,45,	0,275,1202,1508,
#Partially deleted in new
chr20	35469845	35472785	chr20:35469845-35472785	0	+	35469845	35469845	8553170	3	141,102,113,	0,2204,2827,
#Partially deleted in new
chr20	35474000	35478096	chr20:35474000-35478096	0	+	35474000	35478096	789624	5	52,59,145,147,226,	0,793,1501,2448,3870,
#Partially deleted in new
chr20	35476202	35490982	chr20:35476202-35490982	3	-	35476202	35476202	8553170	2	473,127,	0,14653,
#Partially deleted in new
chr20	35476373	35490919	chr20:35476373-35490919	1	-	35476373	35476373	8553170	3	302,120,64,	0,1452,14482,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	35476373	35490917	chr20:35476373-35490917	0	-	35476373	35476373	8553170	3	302,119,62,	0,4759,14482,
#Partially deleted in new
chr20	35494377	35496637	chr20:35494377-35496637	0	+	35494377	35494377	8553170	2	280,61,	0,2199,
#Partially deleted in new
chr20	35497808	35502804	chr20:35497808-35502804	0	+	35497808	35501880	789624	4	259,122,122,415,	0,786,4036,4581,
#Partially deleted in new
chr20	35502905	35511640	chr20:35502905-35511640	0	+	35502905	35511626	789624	4	2100,114,156,278,	0,4832,5129,8457,
#Partially deleted in new
chr20	35509997	35517531	chr20:35509997-35517531	0	+	35509997	35517029	789624	2	57,550,	0,6984,
#Partially deleted in new
chr20	35520851	35528255	chr20:35520851-35528255	7	-	35520851	35520851	16724991	8	292,120,49,199,188,231,205,23,	0,1119,1338,1539,1821,2157,6194,7381,
#Partially deleted in new
chr20	35521083	35523173	chr20:35521083-35523173	5	-	35521083	35521083	16724991	5	60,120,160,89,112,	0,887,1346,1589,1978,
#Deleted in new
chr20	35522235	35523259	chr20:35522235-35523259	4	-	35522235	35522235	16724991	4	3,199,188,251,	0,155,437,773,
#Partially deleted in new
chr20	35523185	35529652	chr20:35523185-35529652	3	-	35528257	35529373	789624	6	206,52,94,179,360,94,	0,5047,5265,5515,5879,6373,
#Partially deleted in new
chr20	35526970	35529619	chr20:35526970-35529619	1	-	35528257	35529029	789624	5	280,52,94,547,61,	0,1262,1480,1730,2588,
#Partially deleted in new
chr20	35526970	35529652	chr20:35526970-35529652	1	-	35528257	35529373	789624	6	280,52,94,179,360,94,	0,1262,1480,1730,2094,2588,
#Deleted in new
chr20	35528744	35529623	chr20:35528744-35529623	0	-	35528744	35529124	789624	3	135,183,65,	0,320,814,
#Partially deleted in new
chr20	35542020	35557634	chr20:35542020-35557634	1	+	35542097	35557504	789624	13	165,71,88,120,94,166,58,32,97,65,137,56,210,	0,302,492,801,5391,6488,6787,13023,14012,14186,14952,15173,15404,
#Partially deleted in new
chr20	35542037	35557634	chr20:35542037-35557634	3	+	35542097	35557504	789624	14	148,71,88,120,94,166,58,15,32,97,65,137,56,210,	0,285,475,784,5374,6471,6770,12334,13006,13995,14169,14935,15156,15387,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	35542068	35549783	chr20:35542068-35549783	0	+	35542068	35542068	8553170	7	117,71,88,120,94,166,976,	0,254,444,753,5343,6440,6739,
#Partially deleted in new
chr20	35542078	35547471	chr20:35542078-35547471	0	+	35542097	35543665	789624	6	107,71,88,120,144,60,	0,244,434,743,1582,5333,
#Deleted in new
chr20	35542078	35543139	chr20:35542078-35543139	0	+	35542078	35542078	8553170	4	107,71,88,318,	0,244,434,743,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	35542081	35545404	chr20:35542081-35545404	0	+	35542081	35542081	8553170	4	104,71,88,2583,	0,241,431,740,
#Partially deleted in new
chr20	35542101	35557546	chr20:35542101-35557546	0	+	35542101	35557504	789624	14	84,71,88,120,94,166,58,45,32,97,65,137,56,122,	0,221,411,720,5310,6407,6706,7061,12942,13931,14105,14871,15092,15323,
#Partially deleted in new
chr20	35542104	35557633	chr20:35542104-35557633	1	+	35542328	35557485	789624	10	81,26,30,166,58,32,97,65,83,194,	0,218,5371,6404,6703,12939,13928,14102,14868,15335,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	35542115	35543909	chr20:35542115-35543909	0	+	35542115	35543665	789624	5	70,71,88,120,252,	0,207,397,706,1542,
#Partially deleted in new
chr20	35542129	35557066	chr20:35542129-35557066	0	+	35542129	35557066	789624	11	56,71,88,156,94,166,58,32,97,65,94,	0,193,383,656,5282,6379,6678,12914,13903,14077,14843,
#Partially deleted in new
chr20	35542191	35548865	chr20:35542191-35548865	0	+	35542191	35542191	8553170	6	202,88,120,94,166,58,	0,321,630,5220,6317,6616,
#Partially deleted in new
chr20	35542442	35556262	chr20:35542442-35556262	0	+	35542442	35542442	8553170	8	158,120,94,166,58,32,97,56,	0,379,4969,6066,6365,12601,13590,13764,
#Deleted in new
chr20	35544429	35544747	chr20:35544429-35544747	7	-	35544429	35544429	16724991	1	318,	0,
#Partially deleted in new
chr20	35547261	35548979	chr20:35547261-35548979	0	+	35547261	35547261	8553170	3	244,166,172,	0,1247,1546,
#Partially deleted in new
chr20	35547486	35556432	chr20:35547486-35556432	0	+	35547486	35547486	8553170	6	19,166,58,32,97,226,	0,1022,1321,7557,8546,8720,
#Partially deleted in new
chr20	35554856	35557096	chr20:35554856-35557096	0	+	35554856	35554856	8553170	4	219,97,65,124,	0,1176,1350,2116,
#Partially deleted in new
chr20	35554915	35556560	chr20:35554915-35556560	0	+	35554915	35554915	8553170	2	160,354,	0,1291,
#Deleted in new
chr20	35556042	35557455	chr20:35556042-35557455	0	+	35556042	35557455	789624	5	87,65,233,56,31,	0,164,834,1151,1382,
#Deleted in new
chr20	35556094	35557633	chr20:35556094-35557633	0	+	35556094	35557504	789624	5	35,65,155,56,209,	0,112,860,1099,1330,
#Deleted in new
chr20	35556578	35557450	chr20:35556578-35557450	0	+	35556578	35556578	8553170	4	170,137,56,26,	0,394,615,846,
#Deleted in new
chr20	35556609	35557634	chr20:35556609-35557634	0	+	35556609	35556609	8553170	3	500,56,210,	0,584,815,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr20	35558736	35599672	chr20:35558736-35599672	5	-	35558736	35558736	16724991	15	316,101,1298,86,1065,128,54,117,138,101,43,117,88,101,107,	0,419,604,3115,5117,6363,8864,17430,17644,17859,18049,36740,36930,40277,40829,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	35558736	35564540	chr20:35558736-35564540	5	-	35558736	35558736	16724991	7	316,101,287,242,99,86,687,	0,419,604,1386,1803,3115,5117,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	35558736	35578930	chr20:35558736-35578930	5	-	35558736	35558736	16724991	13	316,101,287,202,99,86,1065,128,117,138,101,43,95,	0,419,604,1426,1803,3115,5117,6363,17430,17644,17859,18049,20099,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr20	35558741	35582615	chr20:35558741-35582615	4	-	35558741	35558741	16724991	16	311,101,287,516,86,1065,128,117,138,45,43,132,59,199,162,321,	0,414,599,1381,3110,5112,6358,17425,17639,17910,18044,20094,20314,20516,23297,23553,
#Partially deleted in new
chr20	35558743	35583967	chr20:35558743-35583967	4	-	35558743	35558743	16724991	22	309,472,242,99,86,161,155,171,128,117,138,101,43,132,59,199,162,117,174,135,125,28,	0,412,1379,1796,3108,4065,5110,6004,6356,17423,17637,17852,18042,20092,20312,20514,23295,23551,24095,24384,24942,25196,
#Partially deleted in new
chr20	35558865	35607494	chr20:35558865-35607494	7	-	35558865	35558865	16724991	45	187,101,287,242,99,86,161,155,171,128,117,138,101,43,132,59,199,162,117,174,135,125,154,153,117,88,101,121,172,109,362,187,184,160,85,63,132,61,171,42,92,100,89,56,80,	0,290,475,1257,1674,2986,3943,4988,5882,6234,17301,17515,17730,17920,19970,20190,20392,23173,23429,23973,24262,24820,25074,26258,36611,36801,40148,40700,40907,41247,41697,42666,42940,43241,43657,43823,44144,44393,44931,45438,45664,47256,47452,48235,48549,
#Partially deleted in new
chr20	35576175	35579261	chr20:35576175-35579261	4	-	35576175	35576175	16724991	6	108,138,101,43,59,4,	0,205,420,610,2880,3082,
#Deleted in new
chr20	35576229	35576586	chr20:35576229-35576586	4	-	35576229	35576229	16724991	2	54,206,	0,151,
#Partially deleted in new
chr20	35582118	35607562	chr20:35582118-35607562	5	-	35582118	35582118	16724991	26	82,117,135,154,153,117,88,101,121,172,109,362,187,184,160,85,63,132,61,171,42,92,100,89,56,148,	0,176,1009,1821,3005,13358,13548,16895,17447,17654,17994,18444,19413,19687,19988,20404,20570,20891,21140,21678,22185,22411,24003,24199,24982,25296,
#Partially deleted in new
chr20	35588323	35588607	chr20:35588323-35588607	7	+	35588323	35588323	16724991	1	284,	0,
#Deleted in new
chr20	35599710	35600774	chr20:35599710-35600774	4	-	35599710	35599710	16724991	2	511,212,	0,852,
#Partially deleted in new
chr20	35600698	35605326	chr20:35600698-35605326	4	-	35600698	35600698	16724991	9	226,187,946,132,61,171,42,92,225,	0,833,1107,2311,2560,3098,3605,3831,4403,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	35603103	35606540	chr20:35603103-35606540	4	-	35603103	35603103	16724991	7	38,61,171,42,92,100,223,	0,155,693,1200,1426,3018,3214,
#Partially deleted in new
chr20	35603920	35607529	chr20:35603920-35607529	4	-	35603920	35603920	16724991	7	47,42,92,100,89,66,115,	0,383,609,2201,2397,3180,3494,
#Partially deleted in new
chr20	35615891	35621049	chr20:35615891-35621049	3	+	35616003	35621022	789624	12	416,105,67,62,44,26,109,76,116,168,90,174,	0,1244,1628,1887,2195,2558,2720,3031,3303,3687,4792,4984,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	35616879	35618896	chr20:35616879-35618896	0	+	35616879	35616879	8553170	5	361,67,62,44,447,	0,640,899,1207,1570,
#Deleted in new
chr20	35617023	35619688	chr20:35617023-35619688	0	+	35617206	35619688	789624	9	217,67,62,44,26,109,76,116,110,	0,496,755,1063,1426,1588,1899,2171,2555,
#Deleted in new
chr20	35617023	35618852	chr20:35617023-35618852	0	+	35617023	35617023	8553170	3	217,67,84,	0,496,1745,
#Deleted in new
chr20	35617045	35619736	chr20:35617045-35619736	0	+	35617045	35617045	8553170	7	195,321,44,271,76,116,158,	0,474,1041,1404,1877,2149,2533,
#Partially deleted in new
chr20	35617688	35620934	chr20:35617688-35620934	0	+	35617688	35617688	8553170	7	152,26,76,116,168,90,59,	0,761,1234,1506,1890,2995,3187,
#Partially deleted in new
chr20	35619584	35621049	chr20:35619584-35621049	0	+	35619584	35621022	789624	3	162,117,174,	0,1072,1291,
#Partially deleted in new
chr20	35626030	35664886	chr20:35626030-35664886	3	-	35626240	35632923	789624	18	351,237,134,52,55,134,60,87,87,90,81,72,75,180,129,143,53,127,	0,536,1249,4408,4710,4870,5083,5237,5461,5657,5914,6132,6280,6486,6764,29171,32899,38729,
#Partially deleted in new
chr20	35626043	35653677	chr20:35626043-35653677	1	-	35626240	35653542	789624	16	338,237,134,52,55,134,60,87,87,90,81,72,75,180,129,150,	0,523,1236,4395,4697,4857,5070,5224,5448,5644,5901,6119,6267,6473,6751,27484,
#Partially deleted in new
chr20	35626043	35664876	chr20:35626043-35664876	0	-	35626240	35632923	789624	16	338,237,134,52,55,134,60,87,87,90,81,72,75,180,129,117,	0,523,1236,4395,4697,4857,5070,5224,5448,5644,5901,6119,6267,6473,6751,38716,
#Partially deleted in new
chr20	35626043	35630456	chr20:35626043-35630456	0	-	35626148	35630456	789624	4	338,241,134,18,	0,519,1236,4395,
#Deleted in new
chr20	35626043	35626853	chr20:35626043-35626853	0	-	35626043	35626043	8553170	2	338,287,	0,523,
#Partially deleted in new
chr20	35626043	35627340	chr20:35626043-35627340	0	-	35626043	35626043	8553170	2	760,61,	0,1236,
#Partially deleted in new
chr20	35626043	35627399	chr20:35626043-35627399	0	-	35626043	35626043	8553170	3	338,92,120,	0,691,1236,
#Partially deleted in new
chr20	35626057	35664861	chr20:35626057-35664861	0	-	35626057	35626057	8553170	15	324,237,134,52,55,134,60,87,87,90,81,223,180,129,102,	0,509,1222,4381,4683,4843,5056,5210,5434,5630,5887,6105,6459,6737,38702,
#Partially deleted in new
chr20	35626065	35664875	chr20:35626065-35664875	1	-	35626240	35632923	789624	16	316,69,134,52,55,134,60,87,87,90,81,72,75,180,129,74,	0,669,1214,4373,4675,4835,5048,5202,5426,5622,5879,6097,6245,6451,6729,38736,
#Partially deleted in new
chr20	35626085	35632554	chr20:35626085-35632554	0	-	35626085	35626085	8553170	12	296,237,134,596,60,87,87,90,81,72,75,38,	0,481,1194,4353,5028,5182,5406,5602,5859,6077,6225,6431,
#Partially deleted in new
chr20	35626158	35664877	chr20:35626158-35664877	0	-	35626778	35632923	789624	16	223,260,134,52,55,134,60,87,87,90,81,72,75,180,129,76,	0,408,1121,4280,4582,4742,4955,5109,5333,5529,5786,6004,6152,6358,6636,38643,
#Partially deleted in new
chr20	35626251	35664956	chr20:35626251-35664956	0	-	35626251	35632923	789624	16	130,234,134,52,55,134,60,87,87,90,81,72,75,180,129,155,	0,315,1028,4187,4489,4649,4862,5016,5240,5436,5693,5911,6059,6265,6543,38550,
#Partially deleted in new
chr20	35626693	35627531	chr20:35626693-35627531	0	-	35626693	35626693	8553170	2	110,252,	0,586,
#Partially deleted in new
chr20	35627284	35664932	chr20:35627284-35664932	0	-	35627284	35632923	789624	13	129,52,55,134,60,87,87,90,81,75,180,129,173,	0,3154,3456,3616,3829,3983,4207,4403,4660,5026,5232,5510,37475,
#Partially deleted in new
chr20	35630907	35664883	chr20:35630907-35664883	0	-	35630907	35632923	789624	10	127,60,87,87,90,81,75,180,129,82,	0,206,360,584,780,1037,1403,1609,1887,33894,
#Deleted in new
chr20	35630957	35632049	chr20:35630957-35632049	0	-	35630957	35630957	8553170	6	77,60,87,87,90,105,	0,156,310,534,730,987,
#Partially deleted in new
chr20	35630982	35664916	chr20:35630982-35664916	0	-	35630982	35632923	789624	11	52,60,87,87,90,81,72,75,180,129,157,	0,131,285,509,705,962,1180,1328,1534,1812,33777,
#Partially deleted in new
chr20	35631493	35664863	chr20:35631493-35664863	0	-	35631493	35632923	789624	7	85,90,81,75,180,129,104,	0,194,451,817,1023,1301,33266,
#Partially deleted in new
chr20	35631511	35664932	chr20:35631511-35664932	0	-	35631511	35632923	789624	8	67,90,81,72,75,180,129,54,	0,176,433,651,799,1005,1283,33367,
#Partially deleted in new
chr20	35631558	35664882	chr20:35631558-35664882	0	-	35632215	35632923	789624	8	20,90,81,86,75,180,129,123,	0,129,386,604,752,958,1236,33201,
#Partially deleted in new
chr20	35631687	35664900	chr20:35631687-35664900	0	-	35631687	35632923	789624	8	90,81,72,75,180,129,53,141,	0,257,475,623,829,1107,27242,33072,
#Partially deleted in new
chr20	35631709	35664900	chr20:35631709-35664900	0	-	35631709	35632923	789624	8	68,81,72,75,180,129,85,141,	0,235,453,601,807,1085,27220,33050,
#Partially deleted in new
chr20	35631959	35664882	chr20:35631959-35664882	0	-	35631959	35632923	789624	7	66,72,75,180,129,143,81,	0,203,351,557,835,23242,32842,
#Partially deleted in new
chr20	35631996	35664889	chr20:35631996-35664889	0	-	35631996	35632923	789624	6	29,75,180,129,53,130,	0,314,520,798,26933,32763,
#Partially deleted in new
chr20	35632162	35664901	chr20:35632162-35664901	0	-	35632162	35632923	789624	7	72,75,180,129,143,85,142,	0,148,354,632,23039,26767,32597,
#Partially deleted in new
chr20	35632209	35664837	chr20:35632209-35664837	0	-	35632209	35632923	789624	7	25,75,180,129,143,85,36,	0,101,307,585,22992,26720,32592,
#Partially deleted in new
chr20	35632339	35674400	chr20:35632339-35674400	0	-	35658996	35674400	789624	7	46,180,143,85,90,16,51,	0,177,22862,26590,40415,41261,42010,
#Partially deleted in new
chr20	35632339	35674400	chr20:35632339-35674400	0	-	35655233	35674400	789624	7	46,180,143,85,90,84,51,	0,177,22862,26590,40415,41261,42010,
#Partially deleted in new
chr20	35632339	35674544	chr20:35632339-35674544	3	-	35655233	35674544	789624	9	46,180,129,143,85,90,84,82,33,	0,177,455,22862,26590,40415,41261,42010,42172,
#Partially deleted in new
chr20	35632625	35664558	chr20:35632625-35664558	0	-	35632625	35632923	789624	3	71,129,200,	0,169,31733,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	35643142	35643462	chr20:35643142-35643462	3	+	35643142	35643142	8553170	1	320,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	35647327	35647430	chr20:35647327-35647430	3	-	35647327	35647327	8553170	1	103,	0,
#Partially deleted in new
chr20	35648924	35664916	chr20:35648924-35664916	3	-	35652523	35655322	0	3	6420,85,157,	0,10005,15835,
#Partially deleted in new
chr20	35650141	35664888	chr20:35650141-35664888	1	-	35652523	35655322	0	2	5203,129,	0,14618,
#Partially deleted in new
chr20	35650325	35664900	chr20:35650325-35664900	1	-	35652523	35655322	0	3	5019,53,141,	0,8604,14434,
#Partially deleted in new
chr20	35654449	35664889	chr20:35654449-35664889	0	-	35654449	35655322	789624	3	895,85,88,	0,4480,10352,
#Partially deleted in new
chr20	35654892	35664956	chr20:35654892-35664956	0	-	35654892	35655322	789624	3	452,53,78,	0,4037,9986,
#Partially deleted in new
chr20	35654920	35664934	chr20:35654920-35664934	0	-	35654920	35655322	789624	3	424,85,56,	0,4009,9958,
#Partially deleted in new
chr20	35658929	35664900	chr20:35658929-35664900	0	-	35658929	35658929	8553170	2	85,542,	0,5429,
#Partially deleted in new
chr20	35668054	35699359	chr20:35668054-35699359	3	-	35669621	35699288	0	13	1631,90,84,82,106,158,135,94,153,84,117,110,168,	0,4700,5546,6295,6457,6990,12682,13833,22358,28322,29629,30426,31137,
#Partially deleted in new
chr20	35668698	35699189	chr20:35668698-35699189	1	-	35669621	35698507	0	13	987,90,84,82,106,158,135,94,153,84,117,110,445,	0,4056,4902,5651,5813,6346,12038,13189,21714,27678,28985,29782,30046,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	35668963	35676186	chr20:35668963-35676186	0	-	35668963	35668963	8553170	5	722,90,84,82,1675,	0,3791,4637,5386,5548,
#Partially deleted in new
chr20	35668963	35674066	chr20:35668963-35674066	0	-	35668963	35668963	8553170	4	722,90,84,81,	0,3791,4637,5022,
#Partially deleted in new
chr20	35668982	35699349	chr20:35668982-35699349	1	-	35669621	35698507	0	13	703,90,84,82,106,158,135,94,153,84,117,110,40,	0,3772,4618,5367,5529,6062,11754,12905,21430,27394,28701,29498,30327,
#Partially deleted in new
chr20	35668992	35699355	chr20:35668992-35699355	0	-	35674612	35698507	789624	12	693,90,84,82,106,135,94,153,84,117,110,46,	0,3762,4608,5357,5519,11744,12895,21420,27384,28691,29488,30317,
#Partially deleted in new
chr20	35669470	35699352	chr20:35669470-35699352	1	-	35669621	35699288	0	12	215,90,84,82,106,158,135,94,84,117,110,161,	0,3284,4130,4879,5041,5574,11266,12417,26906,28213,29010,29721,
#Deleted in new
chr20	35673757	35674798	chr20:35673757-35674798	0	-	35673757	35673757	8553170	2	674,287,	0,754,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	35674530	35682791	chr20:35674530-35682791	0	-	35674530	35674530	8553170	5	87,158,135,94,128,	0,514,6206,7357,8133,
#Partially deleted in new
chr20	35690470	35699189	chr20:35690470-35699189	0	-	35690470	35698507	789624	5	95,84,117,110,145,	0,5906,7213,8010,8574,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	35694571	35699304	chr20:35694571-35699304	1	-	35694723	35699288	789624	5	314,84,117,110,113,	0,1805,3112,3909,4620,
#Deleted in new
chr20	35699271	35700984	chr20:35699271-35700984	3	+	35699632	35700906	789624	3	180,131,187,	0,361,1526,
#Deleted in new
chr20	35699352	35700984	chr20:35699352-35700984	1	+	35699632	35700906	789624	3	104,131,187,	0,280,1445,
#Deleted in new
chr20	35699441	35700978	chr20:35699441-35700978	1	+	35699632	35700823	789624	3	15,131,204,	0,191,1333,
#Deleted in new
chr20	35699450	35700980	chr20:35699450-35700980	1	+	35699632	35700906	789624	2	313,183,	0,1347,
#Deleted in new
chr20	35699450	35700910	chr20:35699450-35700910	1	+	35699632	35700906	789624	3	44,131,113,	0,182,1347,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr20	35701346	35742236	chr20:35701346-35742236	0	-	35701346	35701346	8553170	18	3235,79,106,82,33,78,205,66,138,153,118,54,66,195,896,50,64,296,	0,3321,3878,5773,7877,11672,12838,15393,20393,23223,23691,27965,28115,30594,32839,37621,39477,40594,
#Partially deleted in new
chr20	35703608	35742236	chr20:35703608-35742236	0	-	35703608	35703608	8553170	16	973,79,106,82,51,78,205,66,138,153,118,54,66,195,1920,296,	0,1059,1616,3511,5615,9410,10576,13131,18131,20961,21429,25703,25853,28332,35359,38332,
#Partially deleted in new
chr20	35703609	35741951	chr20:35703609-35741951	3	-	35704480	35740874	0	17	972,79,106,82,51,78,205,66,138,153,118,54,66,195,50,64,11,	0,1058,1615,3510,5614,9409,10575,13130,18130,20960,21428,25702,25852,28331,35358,37214,38331,
#Partially deleted in new
chr20	35703609	35742312	chr20:35703609-35742312	1	-	35704480	35740874	0	17	972,79,106,82,33,78,205,66,138,153,118,54,66,195,50,64,372,	0,1058,1615,3510,5614,9409,10575,13130,18130,20960,21428,25702,25852,28331,35358,37214,38331,
#Partially deleted in new
chr20	35703609	35739037	chr20:35703609-35739037	0	-	35703609	35703609	8553170	15	972,79,106,82,33,78,205,66,138,153,118,54,66,195,70,	0,1058,1615,3510,5614,9409,10575,13130,18130,20960,21428,25702,25852,28331,35358,
#Partially deleted in new
chr20	35703610	35742221	chr20:35703610-35742221	0	-	35707189	35740874	789624	18	971,79,106,82,53,33,78,205,66,138,153,118,54,66,195,50,64,281,	0,1057,1614,3509,4329,5613,9408,10574,13129,18129,20959,21427,25701,25851,28330,35357,37213,38330,
#Partially deleted in new
chr20	35703610	35742274	chr20:35703610-35742274	0	-	35740525	35740874	789624	18	971,79,106,82,51,78,205,66,138,153,118,54,66,195,50,73,64,334,	0,1057,1614,3509,5613,9408,10574,13129,18129,20959,21427,25701,25851,28330,35357,36914,37213,38330,
#Partially deleted in new
chr20	35703897	35742238	chr20:35703897-35742238	1	-	35704480	35740874	0	16	684,79,106,82,51,78,205,66,138,153,118,54,195,50,64,298,	0,770,1327,3222,5326,9121,10287,12842,17842,20672,21140,25414,28043,35070,36926,38043,
#Partially deleted in new
chr20	35704325	35742256	chr20:35704325-35742256	0	-	35734214	35740874	789624	18	256,79,106,82,51,78,205,66,138,153,118,54,66,195,72,50,64,316,	0,342,899,2794,4898,8693,9859,12414,17414,20244,20712,24986,25136,27615,29860,34642,36498,37615,
#Partially deleted in new
chr20	35704325	35742248	chr20:35704325-35742248	0	-	35740525	35740874	789624	18	256,79,106,82,33,78,205,66,138,153,118,54,66,195,50,73,64,308,	0,342,899,2794,4898,8693,9859,12414,17414,20244,20712,24986,25136,27615,34642,36199,36498,37615,
#Partially deleted in new
chr20	35704325	35714251	chr20:35704325-35714251	0	-	35709274	35714251	789624	7	256,79,106,82,86,78,67,	0,342,899,2794,4898,8693,9859,
#Partially deleted in new
chr20	35704325	35713203	chr20:35704325-35713203	0	-	35704325	35704325	8553170	6	256,79,106,82,51,185,	0,342,899,2794,4898,8693,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	35704327	35732806	chr20:35704327-35732806	0	-	35704327	35704327	8553170	14	254,79,106,82,51,78,205,66,138,153,118,54,66,866,	0,340,897,2792,4896,8691,9857,12412,17412,20242,20710,24984,25134,27613,
#Partially deleted in new
chr20	35704376	35707988	chr20:35704376-35707988	0	-	35704376	35704376	8553170	3	205,663,869,	0,291,2743,
#Partially deleted in new
chr20	35704376	35707361	chr20:35704376-35707361	0	-	35704376	35704376	8553170	4	205,79,106,242,	0,291,848,2743,
#Deleted in new
chr20	35704399	35705399	chr20:35704399-35705399	0	-	35704399	35704399	8553170	3	182,79,175,	0,268,825,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	35704404	35713366	chr20:35704404-35713366	0	-	35704404	35704404	8553170	6	177,79,106,82,33,348,	0,263,820,2715,4819,8614,
#Partially deleted in new
chr20	35704702	35729344	chr20:35704702-35729344	0	-	35704702	35729344	789624	10	44,106,82,51,78,205,138,153,118,33,	0,522,2417,4521,8316,9482,17037,19867,20335,24609,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	35705261	35713415	chr20:35705261-35713415	0	-	35705261	35705261	8553170	5	69,82,33,78,122,	0,1858,3962,7757,8032,
#Partially deleted in new
chr20	35707135	35721839	chr20:35707135-35721839	0	-	35710379	35721839	789624	7	66,33,138,78,205,66,100,	0,2088,3147,5883,7049,9604,14604,
#Partially deleted in new
chr20	35708803	35713096	chr20:35708803-35713096	0	-	35708803	35708803	8553170	2	471,78,	0,4215,
#Deleted in new
chr20	35708991	35710566	chr20:35708991-35710566	0	-	35708991	35708991	8553170	2	265,284,	0,1291,
#Partially deleted in new
chr20	35709032	35716787	chr20:35709032-35716787	0	-	35709032	35709032	8553170	4	224,78,205,48,	0,3986,5152,7707,
#Partially deleted in new
chr20	35713018	35725112	chr20:35713018-35725112	0	-	35713756	35725112	789624	7	78,156,205,66,138,153,75,	0,683,1166,3721,8721,11551,12019,
#Partially deleted in new
chr20	35721866	35742258	chr20:35721866-35742258	0	-	35721866	35740874	789624	9	11,153,118,51,66,195,50,64,318,	0,2703,3171,7445,7595,10074,17101,18957,20074,
#Partially deleted in new
chr20	35724569	35742113	chr20:35724569-35742113	0	-	35740525	35740874	789624	10	153,118,54,66,195,72,50,73,64,173,	0,468,4742,4892,7371,9616,14398,15955,16254,17371,
#Partially deleted in new
chr20	35724675	35741609	chr20:35724675-35741609	0	-	35724675	35740874	789624	8	47,118,54,66,195,50,64,122,	0,362,4636,4786,7265,14292,16148,16812,
#Partially deleted in new
chr20	35725064	35740597	chr20:35725064-35740597	0	-	35740525	35740597	789624	6	91,51,66,195,50,73,	0,4247,4397,6876,13903,15460,
#Partially deleted in new
chr20	35725123	35739283	chr20:35725123-35739283	0	-	35725123	35725123	8553170	5	32,54,90,195,316,	0,4188,4338,6817,13844,
#Partially deleted in new
chr20	35729321	35741958	chr20:35729321-35741958	0	-	35740525	35740874	789624	6	41,195,50,73,64,18,	0,2619,9646,11203,11502,12619,
#Partially deleted in new
chr20	35729471	35741626	chr20:35729471-35741626	0	-	35740525	35740874	789624	6	56,195,50,73,64,139,	0,2469,9496,11053,11352,12016,
#Partially deleted in new
chr20	35731359	35740837	chr20:35731359-35740837	0	-	35731939	35740837	789624	3	776,50,14,	0,7608,9464,
#Partially deleted in new
chr20	35731359	35739140	chr20:35731359-35739140	0	-	35731359	35731359	8553170	2	776,173,	0,7608,
#Partially deleted in new
chr20	35731915	35742178	chr20:35731915-35742178	0	-	35731915	35731915	8553170	5	220,72,50,64,238,	0,2270,7052,8908,10025,
#Partially deleted in new
chr20	35731945	35740887	chr20:35731945-35740887	0	-	35740525	35740874	789624	5	190,55,50,73,64,	0,4567,7022,8579,8878,
#Partially deleted in new
chr20	35732044	35742219	chr20:35732044-35742219	0	-	35736548	35740874	789624	6	91,72,55,50,64,279,	0,2141,4468,6923,8779,9896,
#Partially deleted in new
chr20	35732059	35739189	chr20:35732059-35739189	0	-	35732059	35732059	8553170	3	76,72,222,	0,2126,6908,
#Partially deleted in new
chr20	35734518	35742258	chr20:35734518-35742258	0	-	35740525	35740874	789624	5	563,50,73,64,318,	0,4449,6006,6305,7422,
#Deleted in new
chr20	35734766	35736641	chr20:35734766-35736641	0	-	35734766	35734766	8553170	2	315,129,	0,1746,
#Partially deleted in new
chr20	35734795	35741979	chr20:35734795-35741979	0	-	35739409	35740874	789624	5	286,50,155,64,39,	0,4172,4597,6028,7145,
#Partially deleted in new
chr20	35734875	35742232	chr20:35734875-35742232	1	-	35734894	35740874	789624	4	206,50,64,292,	0,4092,5948,7065,
#Partially deleted in new
chr20	35739102	35742227	chr20:35739102-35742227	0	-	35739102	35739102	8553170	4	445,73,64,287,	0,1422,1721,2838,
#Partially deleted in new
chr20	35740098	35742238	chr20:35740098-35742238	0	-	35740098	35740098	8553170	3	499,64,298,	0,725,1842,
#Partially deleted in new
chr20	35740457	35741598	chr20:35740457-35741598	0	-	35740457	35740457	8553170	2	430,137,	0,1004,
#Deleted in new
chr20	35752813	35753719	chr20:35752813-35753719	7	+	35752813	35752813	16724991	1	906,	0,
#Partially deleted in new
chr20	35769784	35769867	chr20:35769784-35769867	3	-	35769784	35769784	8553170	1	83,	0,
#Partially deleted in new
chr20	35771973	35863400	chr20:35771973-35863400	0	+	35771973	35771973	8553170	6	106,88,172,85,80,388,	0,66381,70599,75376,86328,91039,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr20	35771982	35950381	chr20:35771982-35950381	3	+	35801522	35947627	0	18	97,115,172,85,80,388,114,180,180,279,99,165,179,100,196,412,184,2897,	0,29508,70590,75367,86319,91030,97455,98972,99667,127387,141266,142050,145501,155797,159266,166714,168881,175502,
#Partially deleted in new
chr20	35772011	35801972	chr20:35772011-35801972	0	+	35772011	35772011	8553170	2	68,482,	0,29479,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	35772021	35847430	chr20:35772021-35847430	0	+	35801522	35845441	789624	6	58,282,115,172,124,81,	0,10306,29469,70551,73363,75328,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	35772025	35913316	chr20:35772025-35913316	0	+	35801522	35913316	789624	12	54,282,115,172,85,80,388,114,180,180,279,68,	0,10302,29465,70547,75324,86276,90987,97412,98929,99624,127344,141223,
#Partially deleted in new
chr20	35772025	35913335	chr20:35772025-35913335	0	+	35801522	35913335	789624	12	54,80,115,172,85,80,388,114,180,180,279,87,	0,28068,29465,70547,75324,86276,90987,97412,98929,99624,127344,141223,
#Partially deleted in new
chr20	35772025	35913316	chr20:35772025-35913316	0	+	35772025	35772025	8553170	10	54,115,172,85,388,114,180,180,279,68,	0,29465,70547,75324,90987,97412,98929,99624,127344,141223,
#Partially deleted in new
chr20	35772032	35775058	chr20:35772032-35775058	0	+	35772032	35772032	8553170	2	47,571,	0,2455,
#Partially deleted in new
chr20	35849388	35863376	chr20:35849388-35863376	0	+	35849464	35863376	789624	3	95,80,364,	0,8913,13624,
#Partially deleted in new
chr20	35850673	35850915	chr20:35850673-35850915	7	-	35850673	35850673	16724991	1	242,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	35853251	35853364	chr20:35853251-35853364	3	-	35853251	35853251	8553170	1	113,	0,
#Partially deleted in new
chr20	35855230	35871120	chr20:35855230-35871120	0	+	35855230	35855230	8553170	5	61,80,388,114,166,	0,3071,7782,14207,15724,
#Partially deleted in new
chr20	35855253	35899525	chr20:35855253-35899525	0	+	35855253	35855253	8553170	5	38,80,114,180,156,	0,3048,14184,16396,44116,
#Partially deleted in new
chr20	35855300	35863248	chr20:35855300-35863248	0	+	35855300	35855300	8553170	3	272,80,236,	0,3001,7712,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	35856355	35863400	chr20:35856355-35863400	0	+	35856355	35856355	8553170	3	175,80,388,	0,1946,6657,
#Partially deleted in new
chr20	35869529	35871893	chr20:35869529-35871893	0	+	35869529	35869529	8553170	3	22,180,244,	0,1425,2120,
#Partially deleted in new
chr20	35878475	35878733	chr20:35878475-35878733	7	+	35878475	35878475	16724991	1	258,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	35887658	35887801	chr20:35887658-35887801	3	+	35887658	35887658	8553170	1	143,	0,
#Deleted in new
chr20	35917179	35917659	chr20:35917179-35917659	0	+	35917371	35917659	789624	2	208,176,	0,304,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	35928569	35928675	chr20:35928569-35928675	3	-	35928569	35928569	8553170	1	106,	0,
#Deleted in new
chr20	35938631	35940929	chr20:35938631-35940929	0	+	35938631	35938631	8553170	2	477,66,	0,2232,
#Partially deleted in new
chr20	35953616	35954626	chr20:35953616-35954626	1	-	35953744	35954284	789624	2	723,179,	0,831,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	35953616	35955359	chr20:35953616-35955359	1	-	35953744	35954284	789624	3	723,40,608,	0,831,1135,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	35953628	35959472	chr20:35953628-35959472	3	-	35953744	35954284	789624	3	1474,193,60,	0,5233,5784,
#Partially deleted in new
chr20	35954563	35980581	chr20:35954563-35980581	0	+	35954579	35980581	789624	5	190,54,138,54,123,	0,3157,18065,21385,25895,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	35954706	35955368	chr20:35954706-35955368	0	+	35954706	35954783	789624	1	662,	0,
#Partially deleted in new
chr20	35968589	36030700	chr20:35968589-36030700	1	+	35968762	36030648	789624	12	224,138,54,164,157,152,139,115,178,121,170,344,	0,4039,7359,11869,15392,16037,18805,26448,39707,42547,55012,61767,
#Partially deleted in new
chr20	35968606	36030700	chr20:35968606-36030700	3	+	35968762	36030648	789624	12	207,138,54,164,157,152,139,115,178,121,158,344,	0,4022,7342,11852,15375,16020,18788,26431,39690,42530,55007,61750,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	35968610	35974956	chr20:35968610-35974956	1	+	35968762	35972880	789624	2	203,2328,	0,4018,
#Partially deleted in new
chr20	35968622	36030669	chr20:35968622-36030669	0	+	35968762	35984654	789624	9	191,138,54,164,152,115,178,121,313,	0,4006,7326,11836,16004,26415,39674,42514,61734,
#Partially deleted in new
chr20	35968622	36030669	chr20:35968622-36030669	1	+	35968762	36030359	789624	11	191,138,54,164,157,152,139,115,178,121,313,	0,4006,7326,11836,15359,16004,18772,26415,39674,42514,61734,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	36045621	36050960	chr20:36045621-36050960	3	-	36045621	36045621	789624	1	5339,	0,
#Deleted in new
chr20	36064242	36064563	chr20:36064242-36064563	3	-	36064242	36064242	8553170	1	321,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	36072440	36074909	chr20:36072440-36074909	1	+	36072440	36072440	8553170	2	404,54,	0,2415,
#Partially deleted in new
chr20	36072677	36085260	chr20:36072677-36085260	3	+	36072677	36072677	8553170	3	133,142,82,	0,1629,12501,
#Deleted in new
chr20	36076017	36076601	chr20:36076017-36076601	7	-	36076017	36076017	16724991	1	584,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	36086251	36088192	chr20:36086251-36088192	3	-	36086251	36086251	8553170	2	136,480,	0,1461,
#Partially deleted in new
chr20	36091503	36230341	chr20:36091503-36230341	1	+	36175559	36229340	789624	20	109,55,165,105,43,76,219,88,153,98,176,149,183,411,105,87,84,81,117,1010,	0,20922,84047,86448,87126,90768,93613,96172,96843,98773,99118,102708,106355,117984,120768,127372,128257,130360,130774,137828,
#Partially deleted in new
chr20	36091841	36175671	chr20:36091841-36175671	0	+	36175559	36175671	789624	3	34,55,121,	0,20584,83709,
#Partially deleted in new
chr20	36092679	36182285	chr20:36092679-36182285	0	+	36173777	36182285	789624	6	134,191,165,105,43,14,	0,81084,82871,85272,85950,89592,
#Partially deleted in new
chr20	36092697	36188430	chr20:36092697-36188430	0	+	36175559	36188430	789624	8	116,165,105,43,76,219,88,84,	0,82853,85254,85932,89574,92419,94978,95649,
#Partially deleted in new
chr20	36092709	36232799	chr20:36092709-36232799	1	+	36173777	36229340	789624	23	104,107,191,165,105,43,76,219,88,153,98,176,149,36,183,411,105,81,87,84,81,117,3468,	0,20983,81054,82841,85242,85920,89562,92407,94966,95637,97567,97912,101502,102619,105149,116778,119562,121650,126166,127051,129154,129568,136622,
#Partially deleted in new
chr20	36092709	36230327	chr20:36092709-36230327	1	+	36175559	36229340	789624	21	104,55,157,165,43,76,219,88,153,98,176,149,183,411,105,84,87,84,81,117,996,	0,19716,28950,82841,85920,89562,92407,94966,95637,97567,97912,101502,105149,116778,119562,121647,126166,127051,129154,129568,136622,
#Partially deleted in new
chr20	36092709	36232799	chr20:36092709-36232799	1	+	36175559	36229340	789624	20	104,55,165,105,43,76,219,88,153,98,176,149,183,411,105,87,84,81,117,3468,	0,19716,82841,85242,85920,89562,92407,94966,95637,97567,97912,101502,105149,116778,119562,126166,127051,129154,129568,136622,
#Partially deleted in new
chr20	36092711	36230343	chr20:36092711-36230343	1	+	36125443	36229340	789624	21	102,55,105,165,105,43,76,219,88,153,98,176,149,183,105,84,87,84,81,117,1012,	0,19714,32711,82839,85240,85918,89560,92405,94964,95635,97565,97910,101500,105147,119560,121645,126164,127049,129152,129566,136620,
#Partially deleted in new
chr20	36092731	36182347	chr20:36092731-36182347	0	+	36173777	36182347	789624	7	82,107,191,165,105,43,76,	0,20961,81032,82819,85220,85898,89540,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	36092836	36175715	chr20:36092836-36175715	0	+	36173777	36175715	789624	6	133,214,138,55,191,165,	0,16836,17860,19589,80927,82714,
#Partially deleted in new
chr20	36121721	36173954	chr20:36121721-36173954	0	+	36173777	36173954	789624	4	95,69,105,191,	0,957,3701,52042,
#Partially deleted in new
chr20	36148725	36155760	chr20:36148725-36155760	0	-	36148725	36148725	8553170	4	33,88,192,165,	0,1097,6337,6870,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	36150412	36155733	chr20:36150412-36155733	3	-	36150412	36150412	8553170	4	2239,132,192,138,	0,2542,4650,5183,
#Partially deleted in new
chr20	36154741	36185335	chr20:36154741-36185335	0	+	36175559	36185335	789624	6	155,165,105,43,76,219,	0,20809,23210,23888,27530,30375,
#Partially deleted in new
chr20	36154749	36232799	chr20:36154749-36232799	3	+	36173777	36229340	789624	22	147,191,165,105,43,76,219,88,153,98,176,149,36,183,411,105,84,87,84,81,117,3468,	0,19014,20801,23202,23880,27522,30367,32926,33597,35527,35872,39462,40579,43109,54738,57522,59607,64126,65011,67114,67528,74582,
#Partially deleted in new
chr20	36173768	36229340	chr20:36173768-36229340	1	+	36173777	36229340	789624	21	186,165,105,43,76,219,88,153,98,176,149,36,183,411,105,81,87,84,81,117,9,	0,1782,4183,4861,8503,11348,13907,14578,16508,16853,20443,21560,24090,35719,38503,40591,45107,45992,48095,48509,55563,
#Partially deleted in new
chr20	36190764	36221944	chr20:36190764-36221944	0	+	36190764	36221944	789624	8	33,149,183,105,81,87,84,81,	0,3447,7094,21507,23595,28111,28996,31099,
#Partially deleted in new
chr20	36197879	36221934	chr20:36197879-36221934	0	+	36197879	36221934	789624	6	162,105,84,87,84,71,	0,14392,16477,20996,21881,23984,
#Partially deleted in new
chr20	36197955	36232799	chr20:36197955-36232799	0	+	36197955	36229340	789624	12	86,105,1932,108,411,105,81,87,84,81,117,3468,	0,2917,7893,10345,11532,14316,16404,20920,21805,23908,24322,31376,
#Partially deleted in new
chr20	36207450	36212376	chr20:36207450-36212376	0	+	36207450	36207450	8553170	3	330,411,105,	0,2037,4821,
#Partially deleted in new
chr20	36214372	36229845	chr20:36214372-36229845	0	+	36214372	36229340	789624	5	68,84,81,117,514,	0,5388,7491,7905,14959,
#Deleted in new
chr20	36233850	36234297	chr20:36233850-36234297	3	+	36233850	36233850	8553170	1	447,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	36236458	36270918	chr20:36236458-36270918	1	+	36239868	36270742	789624	4	45,805,230,386,	0,3362,8238,34074,
#Partially deleted in new
chr20	36236464	36256933	chr20:36236464-36256933	3	+	36239868	36255745	789624	4	39,805,230,1356,	0,3356,8232,19113,
#Partially deleted in new
chr20	36236484	36256933	chr20:36236484-36256933	1	+	36239868	36255745	789624	4	298,805,230,1356,	0,3336,8212,19093,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	36306335	36528637	chr20:36306335-36528637	3	+	36431717	36527031	789624	13	177,231,1071,242,115,51,241,362,80,413,92,156,1825,	0,60709,125310,129773,133418,136391,140361,190369,192906,193863,217914,219515,220477,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	36306380	36528633	chr20:36306380-36528633	1	+	36431717	36527031	789624	13	132,231,1071,242,115,51,241,362,89,413,92,156,1821,	0,60664,125265,129728,133373,136346,140316,190324,193207,193818,217869,219470,220432,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	36367040	36528635	chr20:36367040-36528635	1	+	36431717	36527031	789624	12	235,1071,242,115,51,241,362,80,413,92,156,1823,	0,64605,69068,72713,75686,79656,129664,132201,133158,157209,158810,159772,
#Partially deleted in new
chr20	36367148	36527190	chr20:36367148-36527190	1	+	36431717	36527031	789624	12	127,1071,242,115,51,241,362,89,413,92,156,378,	0,64497,68960,72605,75578,79548,129556,132439,133050,157101,158702,159664,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	36461337	36528637	chr20:36461337-36528637	1	+	36500220	36527031	789624	7	173,362,89,413,92,156,1825,	0,35367,38250,38861,62912,64513,65475,
#Partially deleted in new
chr20	36461467	36500360	chr20:36461467-36500360	0	+	36500220	36500360	789624	6	43,103,362,80,89,162,	0,3797,35237,37774,38120,38731,
#Partially deleted in new
chr20	36461477	36500597	chr20:36461477-36500597	0	+	36500220	36500597	789624	3	33,362,399,	0,35227,38721,
#Partially deleted in new
chr20	36461479	36499317	chr20:36461479-36499317	0	+	36461479	36461479	8553170	3	31,362,76,	0,35225,37762,
#Partially deleted in new
chr20	36461491	36500203	chr20:36461491-36500203	0	+	36461491	36461491	8553170	5	19,128,362,89,5,	0,31566,35213,38096,38707,
#Partially deleted in new
chr20	36461746	36527239	chr20:36461746-36527239	1	+	36462568	36527031	789624	7	853,362,89,413,92,156,427,	0,34958,37841,38452,62503,64104,65066,
#Partially deleted in new
chr20	36473118	36500270	chr20:36473118-36500270	0	+	36473118	36473118	8553170	4	54,362,89,72,	0,23586,26469,27080,
#Partially deleted in new
chr20	36492382	36527231	chr20:36492382-36527231	1	+	36499304	36526063	789624	7	803,362,80,413,92,227,419,	0,4322,6859,7816,31867,33468,34430,
#Deleted in new
chr20	36496994	36500527	chr20:36496994-36500527	0	+	36496994	36496994	8553170	4	72,156,74,329,	0,452,2608,3204,
#Partially deleted in new
chr20	36497816	36527231	chr20:36497816-36527231	0	+	36497816	36497816	8553170	6	1505,89,413,92,156,419,	0,1771,2382,26433,28034,28996,
#Partially deleted in new
chr20	36500196	36526847	chr20:36500196-36526847	0	+	36500196	36500196	8553170	5	79,105,92,156,35,	0,310,24053,25654,26616,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	36507701	36573275	chr20:36507701-36573275	3	-	36507701	36507701	789624	5	573,14,153,103,364,	0,1110,3178,63739,65210,
#Partially deleted in new
chr20	36512608	36526130	chr20:36512608-36526130	1	-	36512608	36512608	8553170	3	117,66,410,	0,12892,13112,
#Partially deleted in new
chr20	36524325	36527059	chr20:36524325-36527059	0	+	36524325	36524325	8553170	3	16,227,247,	0,1525,2487,
#Partially deleted in new
chr20	36525500	36572984	chr20:36525500-36572984	0	-	36525500	36525500	8553170	4	66,201,103,73,	0,2223,45940,47411,
#Partially deleted in new
chr20	36541483	36551447	chr20:36541483-36551447	3	+	36544884	36549249	789624	4	78,210,162,2371,	0,3375,6548,7593,
#Partially deleted in new
chr20	36541496	36549825	chr20:36541496-36549825	1	+	36544884	36549249	789624	3	65,210,749,	0,3362,7580,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	36561236	36561530	chr20:36561236-36561530	3	-	36561236	36561236	8553170	1	294,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	36573487	36593950	chr20:36573487-36593950	3	+	36578774	36591431	789624	3	165,226,3041,	0,5253,17422,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	36573606	36593950	chr20:36573606-36593950	1	+	36578774	36591431	789624	3	139,226,3041,	0,5134,17303,
#Partially deleted in new
chr20	36574552	36612384	chr20:36574552-36612384	3	+	36578774	36612051	789624	5	83,226,104,130,375,	0,4188,33162,35048,37457,
#Partially deleted in new
chr20	36574553	36591239	chr20:36574553-36591239	0	+	36578774	36591239	789624	3	82,226,330,	0,4187,16356,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	36574553	36593945	chr20:36574553-36593945	1	+	36578774	36591431	789624	3	82,226,3036,	0,4187,16356,
#Partially deleted in new
chr20	36574671	36591429	chr20:36574671-36591429	0	+	36578774	36591429	789624	3	177,226,520,	0,4069,16238,
#Partially deleted in new
chr20	36578806	36592141	chr20:36578806-36592141	0	+	36578806	36591621	789624	2	160,637,	0,12698,
#Partially deleted in new
chr20	36578826	36591923	chr20:36578826-36591923	0	+	36578826	36591599	789624	3	140,100,419,	0,12083,12678,
#Partially deleted in new
chr20	36578924	36592298	chr20:36578924-36592298	0	+	36578924	36591621	789624	2	42,743,	0,12631,
#Partially deleted in new
chr20	36605733	36612557	chr20:36605733-36612557	3	+	36605951	36612051	789624	4	332,104,130,548,	0,1981,3867,6276,
#Partially deleted in new
chr20	36605784	36612557	chr20:36605784-36612557	0	+	36605951	36607935	789624	4	281,104,111,548,	0,1930,2105,6225,
#Partially deleted in new
chr20	36605788	36612557	chr20:36605788-36612557	0	+	36605951	36607935	789624	5	277,104,111,130,548,	0,1926,2101,3812,6221,
#Partially deleted in new
chr20	36605810	36608193	chr20:36605810-36608193	0	+	36605810	36605810	8553170	2	255,479,	0,1904,
#Partially deleted in new
chr20	36605816	36612557	chr20:36605816-36612557	1	+	36605951	36612047	789624	4	249,104,158,548,	0,1898,3784,6193,
#Partially deleted in new
chr20	36605821	36612557	chr20:36605821-36612557	1	+	36605951	36612223	789624	3	244,104,548,	0,1893,6188,
#Partially deleted in new
chr20	36605996	36609790	chr20:36605996-36609790	1	+	36605996	36609790	789624	9	12,33,6,15,104,121,12,12,36,	0,13,47,54,1718,3604,3727,3744,3758,
#Partially deleted in new
chr20	36607804	36612557	chr20:36607804-36612557	0	+	36607804	36607804	8553170	3	196,130,548,	0,1796,4205,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	36612317	36646216	chr20:36612317-36646216	3	-	36613865	36641335	0	8	1669,133,150,104,87,100,134,380,	0,1987,2907,20277,21225,22172,28927,33519,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	36612518	36645881	chr20:36612518-36645881	1	-	36613968	36641335	0	8	1468,83,150,104,87,100,134,45,	0,1786,2706,20076,21024,21971,28726,33318,
#Partially deleted in new
chr20	36620402	36621423	chr20:36620402-36621423	7	+	36620402	36620402	16724991	2	108,554,	0,467,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr20	36651765	36746078	chr20:36651765-36746078	3	-	36653519	36721735	789624	16	1936,52,36,48,52,66,104,57,87,61,63,121,106,36,105,34,	0,4594,4731,8571,13280,13470,14523,19575,29050,30752,32647,35726,36913,55206,69913,94279,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr20	36651765	36746067	chr20:36651765-36746067	1	-	36653519	36721735	789624	15	1936,52,36,48,52,66,104,57,87,61,63,121,106,105,23,	0,4594,4731,8571,13280,13470,14523,19575,29050,30752,32647,35726,36913,69913,94279,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr20	36651765	36746053	chr20:36651765-36746053	1	-	36653519	36721735	789624	17	1936,39,52,36,48,52,66,104,57,87,61,63,121,106,36,105,9,	0,3035,4594,4731,8571,13280,13470,14523,19575,29050,30752,32647,35726,36913,55206,69913,94279,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	36652374	36721787	chr20:36652374-36721787	1	-	36653519	36707006	789624	13	1327,52,36,48,52,66,104,57,87,61,63,36,109,	0,3985,4122,7962,12671,12861,13914,18966,28441,30143,32038,54597,69304,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	36668558	36668670	chr20:36668558-36668670	3	-	36668558	36668558	8553170	1	112,	0,
#Partially deleted in new
chr20	36671340	36700675	chr20:36671340-36700675	0	-	36671340	36700500	789624	7	57,87,61,63,121,106,241,	0,9475,11177,13072,16151,17338,29094,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	36751790	36773751	chr20:36751790-36773751	1	-	36752787	36771458	0	11	1107,88,148,75,60,88,73,74,321,49,358,	0,2972,3891,6296,6767,10670,14978,16178,19082,19634,21603,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	36751794	36773818	chr20:36751794-36773818	1	-	36752787	36771458	0	10	1103,88,148,75,60,88,73,74,49,157,	0,2968,3887,6292,6763,10666,14974,16174,19630,21867,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	36751794	36773720	chr20:36751794-36773720	1	-	36752787	36771458	789624	11	1103,88,148,75,60,88,73,74,105,49,59,	0,2968,3887,6292,6763,10666,14974,16174,19078,19630,21867,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	36751794	36773815	chr20:36751794-36773815	3	-	36752787	36771458	0	11	1103,88,148,75,60,88,73,74,321,49,154,	0,2968,3887,6292,6763,10666,14974,16174,19078,19630,21867,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	36751794	36773760	chr20:36751794-36773760	1	-	36752787	36771179	0	10	1103,88,148,75,60,88,73,74,321,99,	0,2968,3887,6292,6763,10666,14974,16174,19078,21867,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	36751794	36773797	chr20:36751794-36773797	0	-	36751794	36751794	8553170	12	1103,88,148,75,60,88,73,74,102,79,49,136,	0,2968,3887,6292,6763,10666,14974,16174,19078,19320,19630,21867,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	36751794	36773798	chr20:36751794-36773798	0	-	36751794	36751794	8553170	10	1103,88,148,75,60,88,73,74,601,137,	0,2968,3887,6292,6763,10666,14974,16174,19078,21867,
#Partially deleted in new
chr20	36758086	36773770	chr20:36758086-36773770	0	-	36758086	36770927	789624	7	75,60,88,73,74,152,109,	0,471,4374,8682,9882,12786,15575,
#Partially deleted in new
chr20	36758086	36773799	chr20:36758086-36773799	0	-	36758086	36771458	789624	8	75,60,88,73,74,321,49,406,	0,471,4374,8682,9882,12786,13338,15307,
#Partially deleted in new
chr20	36758086	36773749	chr20:36758086-36773749	0	-	36758086	36758086	8553170	6	75,60,88,73,74,356,	0,471,4374,8682,9882,15307,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr20	36777441	36863686	chr20:36777441-36863686	1	-	36786484	36863344	789624	15	9196,1351,71,72,252,168,105,231,126,141,1182,63,159,225,1029,	0,15807,19440,20060,25414,27293,28411,31071,32540,35262,37684,39965,51612,61775,85216,
#Partially deleted in new
chr20	36777448	36859873	chr20:36777448-36859873	3	-	36777773	36839414	789624	15	383,225,71,72,252,168,105,231,126,141,1182,63,159,225,300,	0,16926,19433,20053,25407,27286,28404,31064,32533,35255,37677,39958,51605,61768,82125,
#Partially deleted in new
chr20	36783781	36816281	chr20:36783781-36816281	0	-	36786484	36816281	789624	12	577,228,1351,71,72,252,168,105,231,126,141,1156,	0,2628,9467,13100,13720,19074,20953,22071,24731,26200,28922,31344,
#Partially deleted in new
chr20	36828596	36839402	chr20:36828596-36839402	0	-	36828596	36828596	8553170	2	616,186,	0,10620,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	36870098	36870402	chr20:36870098-36870402	3	+	36870098	36870098	8553170	1	304,	0,
#Partially deleted in new
chr20	36876120	36889863	chr20:36876120-36889863	1	+	36876174	36889386	789624	6	87,156,153,96,74,613,	0,1778,2920,4534,11334,13130,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	36876130	36894235	chr20:36876130-36894235	3	+	36876174	36889386	789624	7	77,156,153,96,74,153,1374,	0,1768,2910,4524,11324,13120,16731,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	36887454	36894235	chr20:36887454-36894235	0	+	36887454	36892871	789624	2	74,1374,	0,5407,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr20	36889772	36951901	chr20:36889772-36951901	3	-	36892931	36951643	0	16	3294,138,105,93,140,116,92,109,101,156,71,116,161,73,67,466,	0,8049,8667,14384,15591,21445,22688,26949,27176,29591,37409,40987,45256,51266,56965,61663,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr20	36890250	36951714	chr20:36890250-36951714	0	-	36917078	36951643	789624	16	2816,138,105,93,140,116,92,109,148,156,71,116,161,73,67,279,	0,7571,8189,13906,15113,20967,22210,26471,26698,29113,36931,40509,44778,50788,56487,61185,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr20	36890268	36951707	chr20:36890268-36951707	0	-	36917209	36951643	789624	17	2798,138,105,93,140,116,92,109,101,64,156,71,116,161,73,67,272,	0,7553,8171,13888,15095,20949,22192,26453,26680,26883,29095,36913,40491,44760,50770,56469,61167,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	36890418	36893066	chr20:36890418-36893066	0	-	36892931	36893066	789624	2	1376,448,	0,2200,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr20	36890438	36951714	chr20:36890438-36951714	0	-	36935367	36951643	789624	17	2628,138,105,93,140,116,92,109,101,156,71,116,161,63,73,67,279,	0,7383,8001,13718,14925,20779,22022,26283,26510,28925,36743,40321,44590,44902,50600,56299,60997,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr20	36890518	36951714	chr20:36890518-36951714	0	-	36890518	36890518	8553170	15	2548,138,105,93,140,1335,109,101,156,71,116,161,73,67,279,	0,7303,7921,13638,14845,20699,26203,26430,28845,36663,40241,44510,50520,56219,60917,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr20	36890523	36951708	chr20:36890523-36951708	0	-	36917078	36951643	789624	17	1278,304,138,105,93,140,116,92,109,148,156,71,116,161,73,67,273,	0,2239,7298,7916,13633,14840,20694,21937,26198,26425,28840,36658,40236,44505,50515,56214,60912,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr20	36890573	36951843	chr20:36890573-36951843	1	-	36892931	36951643	0	15	2493,138,93,140,116,92,109,101,156,71,116,161,73,67,408,	0,7248,13583,14790,20644,21887,26148,26375,28790,36608,40186,44455,50465,56164,60862,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr20	36890903	36951714	chr20:36890903-36951714	0	-	36892931	36951643	0	17	904,488,138,105,93,140,116,92,109,101,156,71,116,161,73,67,279,	0,1675,6918,7536,13253,14460,20314,21557,25818,26045,28460,36278,39856,44125,50135,55834,60532,
#Partially deleted in new
chr20	36892715	36951670	chr20:36892715-36951670	0	-	36892715	36892715	8553170	14	351,138,93,140,1335,109,101,156,71,116,161,73,67,235,	0,5106,11441,12648,18502,24006,24233,26648,34466,38044,42313,48323,54022,58720,
#Partially deleted in new
chr20	36892739	36951708	chr20:36892739-36951708	0	-	36917078	36951643	789624	15	327,138,105,93,140,1335,109,148,156,71,116,161,73,67,273,	0,5082,5700,11417,12624,18478,23982,24209,26624,34442,38020,42289,48299,53998,58696,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr20	36892746	36951681	chr20:36892746-36951681	1	-	36893905	36951643	789624	16	1183,138,105,93,140,116,92,109,101,156,71,116,161,73,67,246,	0,5075,5693,11410,12617,18471,19714,23975,24202,26617,34435,38013,42282,48292,53991,58689,
#Partially deleted in new
chr20	36892770	36951569	chr20:36892770-36951569	0	-	36898500	36951569	789624	14	296,138,105,116,92,109,101,156,71,116,161,73,67,134,	0,5051,5669,18447,19690,23951,24178,26593,34411,37989,42258,48268,53967,58665,
#Partially deleted in new
chr20	36892931	36951643	chr20:36892931-36951643	1	-	36892931	36951643	0	14	135,138,105,93,140,116,92,156,71,116,161,73,67,208,	0,4890,5508,11225,12432,18286,19529,26432,34250,37828,42097,48107,53806,58504,
#Partially deleted in new
chr20	36897570	36905394	chr20:36897570-36905394	0	-	36897770	36905394	789624	3	389,93,31,	0,6586,7793,
#Partially deleted in new
chr20	36897668	36905396	chr20:36897668-36905396	0	-	36897770	36905396	789624	4	291,105,93,33,	0,771,6488,7695,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	36903952	36946780	chr20:36903952-36946780	0	-	36917078	36946780	789624	10	1551,1335,109,148,156,71,116,161,73,43,	0,7265,12769,12996,15411,23229,26807,31076,37086,42785,
#Partially deleted in new
chr20	36904021	36927190	chr20:36904021-36927190	0	-	36904021	36904021	8553170	8	228,140,116,92,109,101,156,9,	0,1342,7196,8439,12700,12927,15342,23160,
#Partially deleted in new
chr20	36912247	36951705	chr20:36912247-36951705	0	-	36930861	36951643	789624	10	305,109,148,156,71,116,109,73,67,270,	0,4474,4701,7116,14934,18512,22833,28791,34490,39188,
#Partially deleted in new
chr20	36912347	36951708	chr20:36912347-36951708	0	-	36935367	36951643	789624	11	205,109,101,156,71,116,161,63,73,67,273,	0,4374,4601,7016,14834,18412,22681,22993,28691,34390,39088,
#Partially deleted in new
chr20	36916530	36931049	chr20:36916530-36931049	0	-	36916530	36916530	8553170	6	300,101,156,71,116,72,	0,418,2833,10651,14229,14447,
#Partially deleted in new
chr20	36916722	36951671	chr20:36916722-36951671	0	-	36930833	36951643	789624	8	108,148,156,71,116,73,67,236,	0,226,2641,10459,14037,24316,30015,34713,
#Partially deleted in new
chr20	36926951	36951521	chr20:36926951-36951521	0	-	36930833	36951521	789624	5	301,116,73,67,86,	0,3808,14087,19786,24484,
#Partially deleted in new
chr20	36930798	36947059	chr20:36930798-36947059	0	-	36930798	36930798	8553170	5	77,161,73,67,149,	0,4230,10240,15939,16112,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	36934657	36935203	chr20:36934657-36935203	0	-	36934657	36934657	8553170	1	546,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	36940164	36951681	chr20:36940164-36951681	0	-	36940164	36940164	8553170	3	947,67,246,	0,6573,11271,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	36946408	36951579	chr20:36946408-36951579	0	-	36946408	36946408	8553170	2	396,144,	0,5027,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr20	36996348	37095995	chr20:36996348-37095995	3	-	36998758	37095928	0	22	2581,165,149,91,72,177,212,267,133,165,138,104,113,167,187,50,161,129,65,201,134,223,	0,7353,11062,21930,24310,26301,36316,38893,43804,47737,50704,59204,59797,64754,65735,69075,70375,70644,70884,71637,92640,99424,
#Partially deleted in new
chr20	37003573	37095989	chr20:37003573-37095989	1	-	37003692	37095928	0	21	293,149,91,72,177,212,267,133,165,138,104,113,167,187,50,161,129,65,201,134,217,	0,3837,14705,17085,19076,29091,31668,36579,40512,43479,51979,52572,57529,58510,61850,63150,63419,63659,64412,85415,92199,
#Partially deleted in new
chr20	37021742	37021984	chr20:37021742-37021984	7	-	37021742	37021742	16724991	1	242,	0,
#Deleted in new
chr20	37049253	37049707	chr20:37049253-37049707	7	+	37049253	37049253	16724991	1	454,	0,
#Partially deleted in new
chr20	37056159	37068055	chr20:37056159-37068055	0	-	37056159	37068055	789624	7	99,167,187,50,161,29,70,	0,4943,5924,9264,10564,10833,11826,
#Partially deleted in new
chr20	37068086	37095995	chr20:37068086-37095995	0	-	37081977	37095928	789624	4	100,142,134,223,	0,13801,20902,27686,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	37095784	37097178	chr20:37095784-37097178	3	+	37095784	37095784	8553170	1	1394,	0,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr20	37101225	37179559	chr20:37101225-37179559	0	-	37102686	37179559	789624	24	193,172,66,100,123,156,165,141,115,138,191,136,161,153,125,136,105,96,145,80,123,146,122,337,	0,1438,7373,9030,11098,12764,13947,18472,19278,19673,22383,27806,36584,39936,42491,46548,53837,56634,57666,58871,66895,70686,72769,77997,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr20	37101225	37158904	chr20:37101225-37158904	0	-	37102686	37158904	789624	17	193,172,66,100,123,156,165,141,115,138,191,136,161,125,136,96,13,	0,1438,7373,9030,11098,12764,13947,18472,19278,19673,22383,27806,36584,42491,46548,56634,57666,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr20	37101226	37179480	chr20:37101226-37179480	3	-	37110329	37179480	789624	25	192,172,66,101,123,156,165,141,115,138,191,136,161,153,125,136,105,96,145,80,123,146,122,164,93,	0,1437,7372,9029,11097,12763,13946,18471,19277,19672,22382,27805,36583,39935,42490,46547,53836,56633,57665,58870,66894,70685,72768,77996,78161,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	37101229	37108664	chr20:37101229-37108664	0	-	37101229	37101229	8553170	3	189,216,66,	0,1434,7369,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	37128820	37179571	chr20:37128820-37179571	0	-	37129019	37179571	789624	13	347,161,153,125,136,105,96,145,80,123,146,122,349,	0,8989,12341,14896,18953,26242,29039,30071,31276,39300,43091,45174,50402,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	37128820	37179588	chr20:37128820-37179588	0	-	37129019	37179588	789624	12	347,161,153,125,136,96,145,80,123,146,122,366,	0,8989,12341,14896,18953,29039,30071,31276,39300,43091,45174,50402,
#Partially deleted in new
chr20	37158970	37179338	chr20:37158970-37179338	0	-	37158970	37160134	789624	5	66,80,123,146,116,	0,1126,9150,12941,20252,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	37159000	37178966	chr20:37159000-37178966	0	-	37159000	37160134	789624	6	36,80,123,146,122,168,	0,1096,9120,12911,14994,19798,
#Partially deleted in new
chr20	37165773	37166312	chr20:37165773-37166312	7	-	37165773	37165773	16724991	1	539,	0,
#Partially deleted in new
chr20	37178409	37210150	chr20:37178409-37210150	0	+	37184365	37210150	789624	6	105,194,76,135,177,104,	0,5770,25475,26357,28863,31637,
#Partially deleted in new
chr20	37179045	37241623	chr20:37179045-37241623	3	+	37179356	37241315	789624	17	324,194,96,176,76,135,177,119,106,92,115,195,87,96,76,130,321,	0,5134,19351,20004,24839,25721,28227,31001,34714,44832,46642,49504,50927,53250,54974,57534,62257,
#Partially deleted in new
chr20	37179160	37241619	chr20:37179160-37241619	1	+	37179356	37241315	789624	17	209,194,176,76,135,177,119,106,92,115,195,87,96,76,130,48,317,	0,5019,19889,24724,25606,28112,30886,34599,44717,46527,49389,50812,53135,54859,57419,59241,62142,
#Partially deleted in new
chr20	37179317	37210165	chr20:37179317-37210165	0	+	37179356	37210165	789624	9	52,194,96,176,48,76,135,177,119,	0,4862,19079,19732,21129,24567,25449,27955,30729,
#Partially deleted in new
chr20	37179329	37207443	chr20:37179329-37207443	0	+	37184365	37207443	789624	6	40,194,96,76,135,171,	0,4850,19067,24555,25437,27943,
#Partially deleted in new
chr20	37228633	37241418	chr20:37228633-37241418	0	+	37228633	37241315	789624	5	111,87,76,130,116,	0,1339,5386,7946,12669,
#Partially deleted in new
chr20	37228677	37241429	chr20:37228677-37241429	0	+	37228677	37241418	789624	5	67,87,96,76,127,	0,1295,3618,5342,12625,
#Partially deleted in new
chr20	37229869	37241417	chr20:37229869-37241417	0	+	37229869	37229869	8553170	4	190,76,130,115,	0,4150,6710,11433,
#Partially deleted in new
chr20	37251081	37261835	chr20:37251081-37261835	3	-	37251212	37256889	0	5	150,120,105,102,93,	0,3128,5312,5725,10661,
#Partially deleted in new
chr20	37251085	37256896	chr20:37251085-37256896	1	-	37251212	37256889	0	4	146,120,105,90,	0,3124,5308,5721,
#Partially deleted in new
chr20	37251159	37256889	chr20:37251159-37256889	1	-	37251212	37256889	0	4	69,120,105,83,	0,3050,5234,5647,
#Partially deleted in new
chr20	37289637	37317260	chr20:37289637-37317260	3	+	37301263	37316415	789624	3	49,206,953,	0,11570,26670,
#Partially deleted in new
chr20	37289648	37316639	chr20:37289648-37316639	1	+	37301263	37302300	789624	4	38,206,44,332,	0,11559,12631,26659,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	37289662	37317260	chr20:37289662-37317260	1	+	37301263	37316415	789624	5	24,239,117,206,953,	0,7633,9100,11545,26645,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	37296895	37317260	chr20:37296895-37317260	1	+	37301263	37316415	789624	4	639,117,206,953,	0,1867,4312,19412,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	37297344	37317260	chr20:37297344-37317260	1	+	37301263	37316415	789624	4	190,117,243,953,	0,1418,3826,18963,
#Partially deleted in new
chr20	37344684	37382787	chr20:37344684-37382787	0	+	37344684	37344684	8553170	3	203,74,169,	0,20519,37934,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	37346153	37406050	chr20:37346153-37406050	3	+	37384153	37403379	0	14	102,74,168,254,100,99,104,150,156,180,77,154,132,2880,	0,19050,36465,37996,39921,47741,48020,50008,51545,53961,55448,56281,56595,57017,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	37382603	37405432	chr20:37382603-37405432	1	+	37384153	37403379	0	12	183,254,100,99,104,150,156,180,77,154,132,2262,	0,1546,3471,11291,11570,13558,15095,17511,18998,19831,20145,20567,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	37383667	37406050	chr20:37383667-37406050	1	+	37384153	37403379	0	12	35,254,100,99,104,150,156,180,77,154,132,2880,	0,482,2407,10227,10506,12494,14031,16447,17934,18767,19081,19503,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	37384149	37406050	chr20:37384149-37406050	1	+	37384153	37403379	0	12	254,100,18,99,104,150,156,180,77,154,132,2880,	0,1925,2310,9745,10024,12012,13549,15965,17452,18285,18599,19021,
#Partially deleted in new
chr20	37384322	37394174	chr20:37384322-37394174	0	+	37384322	37384322	8553170	3	81,100,280,	0,1752,9572,
#Partially deleted in new
chr20	37393744	37397746	chr20:37393744-37397746	0	+	37393744	37393744	8553170	4	249,104,150,48,	0,429,2417,3954,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	37396425	37405422	chr20:37396425-37405422	0	+	37396425	37396425	8553170	7	349,156,180,77,154,132,2252,	0,1273,3689,5176,6009,6323,6745,
#Partially deleted in new
chr20	37400148	37401957	chr20:37400148-37401957	0	+	37400148	37400148	8553170	2	146,356,	0,1453,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	37400250	37402292	chr20:37400250-37402292	0	+	37400250	37400250	8553170	3	44,77,463,	0,1351,1579,
#Deleted in new
chr20	37402312	37403031	chr20:37402312-37403031	0	+	37402312	37402312	8553170	2	276,283,	0,436,
#Partially deleted in new
chr20	37444732	37445534	chr20:37444732-37445534	7	-	37444732	37444732	16724991	1	802,	0,
#Partially deleted in new
chr20	37492471	37509231	chr20:37492471-37509231	0	-	37492471	37492471	8553170	3	478,108,128,	0,3113,16632,
#Partially deleted in new
chr20	37492533	37495762	chr20:37492533-37495762	0	-	37492533	37492533	8553170	2	416,178,	0,3051,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	37499892	37503975	chr20:37499892-37503975	0	-	37499892	37499892	8553170	1	4083,	0,
#Partially deleted in new
chr20	37502413	37527862	chr20:37502413-37527862	0	-	37502413	37502413	8553170	4	141,109,119,70,	0,6690,16818,25379,
#Deleted in new
chr20	37517416	37527931	chr20:37517416-37527931	3	-	37518910	37519174	789624	2	1934,139,	0,10376,
#Deleted in new
chr20	37517416	37527732	chr20:37517416-37527732	1	-	37518910	37519174	789624	2	1934,102,	0,10214,
#Deleted in new
chr20	37517416	37527875	chr20:37517416-37527875	1	-	37518910	37519174	789624	2	1934,83,	0,10376,
#Deleted in new
chr20	37517417	37527931	chr20:37517417-37527931	1	-	37518910	37519174	789624	3	1933,133,139,	0,3901,10375,
#Deleted in new
chr20	37518815	37527723	chr20:37518815-37527723	1	-	37518910	37519174	789624	2	535,150,	0,8758,
#Deleted in new
chr20	37518852	37520303	chr20:37518852-37520303	1	-	37518910	37519174	789624	2	498,68,	0,1383,
#Deleted in new
chr20	37518892	37524551	chr20:37518892-37524551	1	-	37518910	37519174	789624	2	458,175,	0,5484,
#Deleted in new
chr20	37518911	37520589	chr20:37518911-37520589	0	-	37518911	37519174	789624	2	439,152,	0,1526,
#Deleted in new
chr20	37518939	37527878	chr20:37518939-37527878	0	-	37518939	37519174	789624	3	411,91,86,	0,2379,8853,
#Deleted in new
chr20	37518988	37527878	chr20:37518988-37527878	0	-	37518988	37519174	789624	3	362,133,86,	0,2330,8804,
#Deleted in new
chr20	37519153	37521693	chr20:37519153-37521693	0	-	37519153	37519174	789624	2	197,375,	0,2165,
#Deleted in new
chr20	37521205	37523690	chr20:37521205-37523690	1	+	37521331	37522759	789624	2	198,1024,	0,1461,
#Deleted in new
chr20	37521214	37523693	chr20:37521214-37523693	3	+	37521331	37522759	789624	3	189,81,1027,	0,1143,1452,
#Deleted in new
chr20	37521240	37523474	chr20:37521240-37523474	1	+	37521331	37522759	8553170	3	163,27,808,	0,1117,1426,
#Deleted in new
chr20	37521249	37523690	chr20:37521249-37523690	1	+	37521331	37522759	8553170	3	154,81,1024,	0,1108,1417,
#Deleted in new
chr20	37521250	37523013	chr20:37521250-37523013	1	+	37521331	37522907	8553170	2	153,373,	0,1390,
#Deleted in new
chr20	37521260	37523342	chr20:37521260-37523342	1	+	37521331	37522896	789624	3	143,76,676,	0,1097,1406,
#Deleted in new
chr20	37526641	37527060	chr20:37526641-37527060	3	-	37526641	37526641	8553170	1	419,	0,
#Deleted in new
chr20	37530038	37530543	chr20:37530038-37530543	7	+	37530038	37530038	16724991	1	505,	0,
#Deleted in new
chr20	37602851	37603185	chr20:37602851-37603185	7	-	37602851	37602851	16724991	1	334,	0,
#Partially deleted in new
chr20	37619297	37623119	chr20:37619297-37623119	3	-	37619297	37619297	789624	3	142,110,291,	0,2793,3531,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	37676909	37683234	chr20:37676909-37683234	3	+	37676909	37676909	789624	4	177,661,111,1163,	0,1048,2006,5162,
#Partially deleted in new
chr20	37693954	37872128	chr20:37693954-37872128	1	+	37732929	37872013	0	17	198,101,189,107,142,96,94,92,73,59,149,182,98,81,138,73,204,	0,33347,38924,43423,52513,63606,71242,73998,83390,83699,85232,108912,146147,148384,165944,166317,177970,
#Partially deleted in new
chr20	37693954	37872128	chr20:37693954-37872128	1	+	37694122	37872013	789624	17	198,189,107,163,4,86,94,92,73,59,149,182,98,81,138,73,204,	0,38924,43423,52513,63091,63616,71242,73998,83390,83699,85232,108912,146147,148384,165944,166317,177970,
#Partially deleted in new
chr20	37694005	37872129	chr20:37694005-37872129	3	+	37694122	37872013	0	16	147,189,107,140,98,94,92,73,59,149,182,98,81,138,73,205,	0,38873,43372,52462,63553,71191,73947,83339,83648,85181,108861,146096,148333,165893,166266,177919,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	37694031	37765212	chr20:37694031-37765212	0	+	37732929	37765212	789624	7	121,107,189,107,140,98,16,	0,895,38847,43346,52436,63527,71165,
#Partially deleted in new
chr20	37694061	37872117	chr20:37694061-37872117	1	+	37732929	37872013	0	17	91,101,189,107,140,98,94,92,73,59,149,182,98,81,138,73,193,	0,33240,38817,43316,52406,63497,71135,73891,83283,83592,85125,108805,146040,148277,165837,166210,177863,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	37744644	37872129	chr20:37744644-37872129	1	+	37746644	37872013	0	13	69,180,94,92,73,59,149,182,98,81,138,73,205,	0,1823,20552,23308,32700,33009,34542,58222,95457,97694,115254,115627,127280,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr20	37749850	37872129	chr20:37749850-37872129	0	+	37749850	37749850	8553170	16	1280,181,101,86,94,92,73,59,149,182,98,98,81,138,73,205,	0,1635,6440,7720,15346,18102,27494,27803,29336,53016,82397,90251,92488,110048,110421,122074,
#Partially deleted in new
chr20	37777272	37872129	chr20:37777272-37872129	1	+	37777350	37872013	0	9	145,59,149,182,98,81,138,73,205,	0,381,1914,25594,62829,65066,82626,82999,94652,
#Partially deleted in new
chr20	37842253	37872129	chr20:37842253-37872129	0	+	37842253	37842253	8553170	4	166,138,73,205,	0,17645,18018,29671,
#Partially deleted in new
chr20	37847857	37872129	chr20:37847857-37872129	0	+	37847857	37847857	8553170	4	34,138,73,205,	0,12041,12414,24067,
#Partially deleted in new
chr20	37903103	37945350	chr20:37903103-37945350	3	+	37903350	37944253	789624	4	368,170,51,1370,	0,28531,30435,40877,
#Partially deleted in new
chr20	37903110	37944450	chr20:37903110-37944450	1	+	37903350	37944258	789624	2	361,470,	0,40870,
#Partially deleted in new
chr20	37903141	37944136	chr20:37903141-37944136	0	+	37903350	37944136	789624	3	330,170,156,	0,28493,40839,
#Partially deleted in new
chr20	37983006	38033468	chr20:37983006-38033468	3	-	37983455	38013816	789624	8	633,88,205,141,149,201,2343,65,	0,13368,13742,16181,19621,23190,28508,50397,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	37983006	38033461	chr20:37983006-38033461	1	-	37983455	38013816	789624	9	633,88,205,141,149,201,2343,140,58,	0,13368,13742,16181,19621,23190,28508,35998,50397,
#Partially deleted in new
chr20	37983021	38013903	chr20:37983021-38013903	1	-	37983455	38013816	789624	7	618,88,205,141,149,201,2389,	0,13353,13727,16166,19606,23175,28493,
#Partially deleted in new
chr20	37996374	38000515	chr20:37996374-38000515	0	-	37996374	37996374	8553170	4	88,205,141,111,	0,374,2813,4030,
#Deleted in new
chr20	38005839	38006271	chr20:38005839-38006271	0	-	38006173	38006271	789624	1	432,	0,
#Deleted in new
chr20	38011807	38013857	chr20:38011807-38013857	0	-	38011807	38011807	8553170	3	415,188,158,	0,543,1892,
#Partially deleted in new
chr20	38033545	38092366	chr20:38033545-38092366	3	+	38033947	38089875	0	7	553,130,134,113,127,176,2641,	0,6889,14802,23986,25848,32535,56180,
#Partially deleted in new
chr20	38033724	38091237	chr20:38033724-38091237	0	+	38033947	38048379	789624	6	374,134,113,127,176,1512,	0,14623,23807,25669,32356,56001,
#Partially deleted in new
chr20	38033831	38059425	chr20:38033831-38059425	0	+	38033947	38057592	789624	4	267,130,113,32,	0,6603,23700,25562,
#Partially deleted in new
chr20	38049752	38089839	chr20:38049752-38089839	0	+	38049752	38089839	789624	5	61,113,127,176,114,	0,7779,9641,16328,39973,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	38065877	38125081	chr20:38065877-38125081	0	+	38065877	38065877	8553170	3	79,176,312,	0,203,58892,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	38066081	38127780	chr20:38066081-38127780	0	+	38066081	38127311	789624	2	175,484,	0,61215,
#Partially deleted in new
chr20	38066180	38070617	chr20:38066180-38070617	0	+	38066180	38070251	789624	2	76,393,	0,4044,
#Partially deleted in new
chr20	38083895	38090259	chr20:38083895-38090259	0	+	38083895	38083895	8553170	2	37,534,	0,5830,
#Partially deleted in new
chr20	38085375	38090008	chr20:38085375-38090008	0	+	38085375	38085375	8553170	2	271,283,	0,4350,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	38098413	38098700	chr20:38098413-38098700	3	-	38098413	38098413	8553170	1	287,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	38103523	38104961	chr20:38103523-38104961	3	-	38103523	38103523	8553170	1	1438,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	38127386	38165372	chr20:38127386-38165372	3	-	38130218	38165198	0	13	2983,137,161,273,243,104,136,178,129,119,243,180,184,	0,3706,4953,10726,12025,13895,14677,19330,20574,23552,28460,34033,37802,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	38128460	38133760	chr20:38128460-38133760	0	-	38128460	38128460	8553170	3	1909,137,1421,	0,2632,3879,
#Partially deleted in new
chr20	38137949	38165282	chr20:38137949-38165282	0	-	38137949	38137949	8553170	10	436,243,104,136,178,129,119,243,180,94,	0,1462,3332,4114,8767,10011,12989,17897,23470,27239,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	38145349	38165259	chr20:38145349-38165259	0	-	38145349	38145349	8553170	6	1545,129,119,243,180,71,	0,2611,5589,10497,16070,19839,
#Partially deleted in new
chr20	38146733	38166508	chr20:38146733-38166508	0	-	38146733	38165198	789624	7	161,129,119,243,180,80,106,	0,1227,4205,9113,14686,18455,19669,
#Partially deleted in new
chr20	38151011	38166578	chr20:38151011-38166578	0	-	38151011	38165198	789624	5	46,243,180,80,144,	0,4835,10408,14177,15423,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	38210487	38260772	chr20:38210487-38260772	3	-	38213041	38260500	789624	14	3256,222,123,139,149,99,117,87,94,124,198,1348,198,275,	0,6765,7756,9142,11961,13050,15177,16666,17659,20714,29040,30094,35441,50010,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	38212471	38218183	chr20:38212471-38218183	0	-	38212471	38212471	8553170	3	1272,146,931,	0,4388,4781,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	38212471	38223144	chr20:38212471-38223144	0	-	38212471	38212471	8553170	5	1272,222,123,139,696,	0,4781,5772,7158,9977,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	38212475	38218105	chr20:38212475-38218105	0	-	38212475	38212475	8553170	2	1268,853,	0,4777,
#Partially deleted in new
chr20	38217252	38227219	chr20:38217252-38227219	0	-	38217252	38227219	789624	6	222,123,139,149,99,66,	0,991,2377,5196,6285,9901,
#Partially deleted in new
chr20	38225548	38260772	chr20:38225548-38260772	1	-	38225634	38260500	789624	8	233,87,94,124,198,1348,198,275,	0,1605,2598,5653,13979,15033,20380,34949,
#Deleted in new
chr20	38233250	38233799	chr20:38233250-38233799	3	-	38233250	38233250	8553170	1	549,	0,
#Partially deleted in new
chr20	38236805	38239599	chr20:38236805-38239599	0	-	38236897	38239599	789624	2	136,72,	0,2722,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	38260148	38304332	chr20:38260148-38304332	3	+	38260148	38260148	8553170	3	208,131,168,	0,28878,44016,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	38260174	38293892	chr20:38260174-38293892	3	+	38260174	38260174	8553170	3	182,131,2544,	0,28852,31174,
#Partially deleted in new
chr20	38260205	38288947	chr20:38260205-38288947	0	+	38260205	38260205	789624	2	151,232,	0,28510,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	38270777	38274020	chr20:38270777-38274020	3	+	38270777	38270777	8553170	1	3243,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	38288330	38326536	chr20:38288330-38326536	3	-	38288330	38288330	8553170	3	457,166,183,	0,1250,38023,
#Partially deleted in new
chr20	38304122	38337505	chr20:38304122-38337505	1	+	38320184	38337184	789624	15	231,115,129,162,64,64,92,177,60,168,68,43,64,77,360,	0,3444,4807,6368,7751,14290,16060,19747,20651,22142,23465,26925,30307,31475,33023,
#Partially deleted in new
chr20	38304149	38337503	chr20:38304149-38337503	3	+	38304211	38337184	0	15	204,115,129,162,64,64,92,177,60,168,68,43,64,77,358,	0,3417,4780,6341,7724,14263,16033,19720,20624,22115,23438,26898,30280,31448,32996,
#Partially deleted in new
chr20	38317648	38337325	chr20:38317648-38337325	1	+	38317728	38337184	789624	11	89,64,92,177,60,168,68,43,64,77,180,	0,764,2534,6221,7125,8616,9939,13399,16781,17949,19497,
#Partially deleted in new
chr20	38317671	38335641	chr20:38317671-38335641	0	+	38317728	38323924	789624	10	66,64,92,125,60,168,68,43,64,44,	0,741,2511,6250,7102,8593,9916,13376,16758,17926,
#Partially deleted in new
chr20	38319785	38321808	chr20:38319785-38321808	0	+	38319785	38319785	8553170	3	196,147,172,	0,342,1851,
#Deleted in new
chr20	38335472	38337261	chr20:38335472-38337261	0	+	38335472	38335472	8553170	2	202,116,	0,1673,
#Partially deleted in new
chr20	38346355	38377023	chr20:38346355-38377023	3	+	38346516	38376669	789624	15	285,115,129,156,64,64,92,177,60,168,68,43,64,77,399,	0,3192,4455,7928,8990,14348,17619,18220,20413,22639,24382,24924,26716,27581,30269,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	38378824	38383179	chr20:38378824-38383179	3	+	38378824	38378824	8553170	2	48,330,	0,4025,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	38406010	38416797	chr20:38406010-38416797	3	-	38406010	38406010	8553170	2	312,1692,	0,9095,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	38418482	38419202	chr20:38418482-38419202	3	-	38418482	38418482	8553170	1	720,	0,
#Partially deleted in new
chr20	38420587	38431066	chr20:38420587-38431066	1	-	38420587	38420587	8553170	4	313,93,85,26,	0,418,5831,10453,
#Partially deleted in new
chr20	38420587	38435333	chr20:38420587-38435333	3	-	38420587	38420587	789624	7	313,93,150,85,72,123,137,	0,418,1504,5831,10453,13916,14609,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	38420591	38429330	chr20:38420591-38429330	0	-	38420591	38420591	8553170	4	309,93,85,1651,	0,414,5827,7088,
#Deleted in new
chr20	38421646	38421774	chr20:38421646-38421774	3	-	38421646	38421646	8553170	1	128,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	38425082	38425354	chr20:38425082-38425354	3	-	38425082	38425082	8553170	1	272,	0,
#Deleted in new
chr20	38425197	38425331	chr20:38425197-38425331	0	-	38425197	38425197	789624	1	134,	0,
#Partially deleted in new
chr20	38426459	38435333	chr20:38426459-38435333	1	-	38426459	38426459	8553170	4	44,72,123,307,	0,4581,8044,8567,
#Deleted in new
chr20	38427308	38427442	chr20:38427308-38427442	3	-	38427308	38427308	789624	1	134,	0,
#Partially deleted in new
chr20	38429669	38429803	chr20:38429669-38429803	3	-	38429669	38429669	789624	1	134,	0,
#Partially deleted in new
chr20	38430779	38435334	chr20:38430779-38435334	0	-	38430779	38430779	8553170	3	333,123,308,	0,3724,4247,
#Deleted in new
chr20	38433864	38433998	chr20:38433864-38433998	3	-	38433864	38433864	789624	1	134,	0,
#Deleted in new
chr20	38442035	38442169	chr20:38442035-38442169	3	+	38442035	38442035	8553170	1	134,	0,
#Deleted in new
chr20	38446577	38450921	chr20:38446577-38450921	0	+	38446577	38446577	8553170	4	435,158,69,660,	0,888,2084,3684,
#Deleted in new
chr20	38446653	38450921	chr20:38446653-38450921	0	+	38446653	38446653	8553170	3	2077,186,389,	0,3608,3879,
#Deleted in new
chr20	38446684	38450921	chr20:38446684-38450921	0	+	38446684	38446684	8553170	4	939,69,112,389,	0,1977,3651,3848,
#Deleted in new
chr20	38446690	38450921	chr20:38446690-38450921	3	+	38446690	38446690	8553170	5	322,158,65,112,389,	0,775,1975,3645,3842,
#Deleted in new
chr20	38446700	38450921	chr20:38446700-38450921	1	+	38446700	38446700	8553170	5	152,158,69,186,389,	0,765,1961,3561,3832,
#Deleted in new
chr20	38446709	38450921	chr20:38446709-38450921	1	+	38446709	38446709	789624	5	303,158,69,112,389,	0,756,1952,3626,3823,
#Deleted in new
chr20	38446709	38450857	chr20:38446709-38450857	1	+	38446709	38446709	8553170	5	303,158,69,112,78,	0,756,1952,3626,4070,
#Deleted in new
chr20	38446715	38450363	chr20:38446715-38450363	1	+	38446715	38446715	8553170	5	137,158,164,69,28,	0,750,1214,1946,3620,
#Deleted in new
chr20	38446723	38450921	chr20:38446723-38450921	1	+	38446723	38446723	8553170	6	289,158,164,69,112,389,	0,742,1206,1938,3612,3809,
#Deleted in new
chr20	38446726	38450921	chr20:38446726-38450921	0	+	38446726	38446726	8553170	4	286,158,65,660,	0,739,1939,3535,
#Deleted in new
chr20	38446756	38450921	chr20:38446756-38450921	1	+	38446756	38446756	8553170	5	256,158,69,186,389,	0,709,1905,3505,3776,
#Deleted in new
chr20	38446886	38448011	chr20:38446886-38448011	0	+	38446886	38446886	8553170	2	737,82,	0,1043,
#Deleted in new
chr20	38447313	38450921	chr20:38447313-38450921	1	+	38447313	38447313	8553170	4	310,69,112,389,	0,1348,3022,3219,
#Deleted in new
chr20	38447537	38450921	chr20:38447537-38450921	0	+	38447537	38447537	8553170	3	86,69,586,	0,1124,2798,
#Deleted in new
chr20	38448083	38448215	chr20:38448083-38448215	3	+	38448083	38448083	5263520	1	132,	0,
#Deleted in new
chr20	38448610	38450921	chr20:38448610-38450921	1	+	38448610	38448610	8553170	3	120,112,389,	0,1725,1922,
#Deleted in new
chr20	38449369	38449503	chr20:38449369-38449503	3	+	38449369	38449369	5263520	1	134,	0,
#Partially deleted in new
chr20	38472815	38578861	chr20:38472815-38578861	3	+	38488432	38574967	789624	30	254,216,203,164,187,132,179,149,217,202,168,115,148,65,130,134,183,152,188,107,153,210,159,166,120,137,109,79,149,4088,	0,15587,20114,24537,26631,36261,43376,44690,44968,48681,51962,52588,53079,58351,59914,62258,66960,68225,73427,75873,78255,81051,85479,89716,92543,94280,97072,97953,101334,101958,
#Partially deleted in new
chr20	38472815	38578859	chr20:38472815-38578859	1	+	38488432	38574967	789624	30	254,216,203,164,187,132,179,149,217,202,168,115,148,65,130,122,183,152,188,107,153,210,159,166,123,137,109,79,149,4086,	0,15587,20114,24537,26631,36261,43376,44690,44968,48681,51962,52588,53079,58351,59914,62270,66960,68225,73427,75873,78255,81051,85479,89716,92540,94280,97072,97953,101334,101958,
#Partially deleted in new
chr20	38472899	38578859	chr20:38472899-38578859	1	+	38488432	38574967	789624	30	28,216,203,164,187,132,179,149,217,202,168,115,148,65,130,134,183,152,188,107,153,210,159,166,120,137,109,79,149,4086,	0,15503,20030,24453,26547,36177,43292,44606,44884,48597,51878,52504,52995,58267,59830,62174,66876,68141,73343,75789,78171,80967,85395,89632,92459,94196,96988,97869,101250,101874,
#Partially deleted in new
chr20	38497437	38500003	chr20:38497437-38500003	0	+	38497437	38497437	8553170	2	79,557,	0,2009,
#Partially deleted in new
chr20	38497479	38575070	chr20:38497479-38575070	0	+	38497479	38574967	789624	27	37,187,132,179,149,217,202,168,115,148,65,130,134,183,152,188,107,153,210,159,166,123,137,109,79,149,297,	0,1967,11597,18712,20026,20304,24017,27298,27924,28415,33687,35250,37594,42296,43561,48763,51209,53591,56387,60815,65052,67876,69616,72408,73289,76670,77294,
#Partially deleted in new
chr20	38509084	38548106	chr20:38509084-38548106	0	+	38509084	38509084	8553170	14	124,179,149,217,202,168,115,148,65,130,134,183,152,1864,	0,7107,8421,8699,12412,15693,16319,16810,22082,23645,25989,30691,31956,37158,
#Partially deleted in new
chr20	38525514	38577226	chr20:38525514-38577226	0	+	38525514	38574967	789624	20	4,148,65,130,9,134,183,152,188,107,153,210,159,166,123,137,109,79,149,2453,	0,380,5652,7215,8870,9559,14261,15526,20728,23174,25556,28352,32780,37017,39841,41581,44373,45254,48635,49259,
#Partially deleted in new
chr20	38537757	38538458	chr20:38537757-38538458	7	+	38537757	38537757	16724991	1	701,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	38568466	38578065	chr20:38568466-38578065	0	+	38568466	38568466	8553170	4	1530,79,149,3292,	0,2302,5683,6307,
#Deleted in new
chr20	38573658	38575993	chr20:38573658-38575993	0	+	38573658	38573658	8553170	3	640,167,121,	0,1115,2214,
#Partially deleted in new
chr20	38581194	38588463	chr20:38581194-38588463	0	+	38581250	38586147	789624	3	180,229,363,	0,4834,6906,
#Partially deleted in new
chr20	38581194	38588461	chr20:38581194-38588461	3	+	38581250	38586147	789624	3	180,229,361,	0,4834,6906,
#Partially deleted in new
chr20	38581205	38585695	chr20:38581205-38585695	1	+	38581250	38585490	789624	2	169,261,	0,4229,
#Partially deleted in new
chr20	38581305	38588463	chr20:38581305-38588463	0	+	38581305	38588455	789624	3	69,115,363,	0,4723,6795,
#Partially deleted in new
chr20	38601933	38650652	chr20:38601933-38650652	3	+	38623380	38649848	789624	15	146,200,221,76,149,166,92,78,160,83,207,141,170,56,896,	0,21425,25061,26993,27568,32686,35774,36827,37293,39792,41770,44113,45023,46709,47823,
#Deleted in new
chr20	38614912	38615476	chr20:38614912-38615476	7	-	38614912	38614912	16724991	1	564,	0,
#Partially deleted in new
chr20	38626995	38650508	chr20:38626995-38650508	0	+	38626995	38650460	789624	14	220,76,149,166,92,78,160,83,207,141,170,56,60,167,	0,1931,2506,7624,10712,11765,12231,14730,16708,19051,19961,21647,22761,23346,
#Partially deleted in new
chr20	38643906	38650379	chr20:38643906-38650379	0	+	38643906	38649848	789624	5	4,141,170,56,623,	0,2140,3050,4736,5850,
#Partially deleted in new
chr20	38647062	38651035	chr20:38647062-38651035	0	+	38647062	38650719	789624	4	64,56,60,354,	0,1580,2694,3619,
#Deleted in new
chr20	38724461	38729372	chr20:38724461-38729372	3	+	38724724	38728639	789624	2	653,1921,	0,2990,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	38748441	38772520	chr20:38748441-38772520	3	+	38748478	38771816	0	9	412,230,170,218,183,117,140,133,962,	0,1568,3689,6515,7415,16960,17796,19022,23117,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	38761527	38761842	chr20:38761527-38761842	3	+	38761527	38761527	8553170	1	315,	0,
#Partially deleted in new
chr20	38805704	38923024	chr20:38805704-38923024	3	+	38835925	38918666	789624	11	88,351,71,146,104,125,126,76,130,166,4868,	0,30120,83890,89860,94876,96963,100264,101274,102101,102323,112452,
#Partially deleted in new
chr20	38805723	38923024	chr20:38805723-38923024	1	+	38835925	38918666	789624	10	69,351,71,146,104,125,76,130,166,4868,	0,30101,83871,89841,94857,96944,101255,102082,102304,112433,
#Partially deleted in new
chr20	38836115	38895646	chr20:38836115-38895646	0	+	38836115	38836115	8553170	4	60,86,71,82,	0,1997,53479,59449,
#Partially deleted in new
chr20	38838447	38895698	chr20:38838447-38895698	0	+	38838447	38838447	8553170	3	63,71,134,	0,51147,57117,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	38872769	38873074	chr20:38872769-38873074	3	+	38872769	38872769	8553170	1	305,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	38926311	38953106	chr20:38926311-38953106	1	+	38926352	38952520	789624	4	614,168,125,1568,	0,15647,21564,25227,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	38926425	38953106	chr20:38926425-38953106	3	+	38926442	38952520	0	4	500,168,125,1568,	0,15533,21450,25113,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	38955909	38956547	chr20:38955909-38956547	3	+	38955909	38955909	8553170	1	638,	0,
#Deleted in new
chr20	38961924	38962111	chr20:38961924-38962111	3	-	38961924	38961924	8553170	1	187,	0,
#Partially deleted in new
chr20	38962298	39039721	chr20:38962298-39039721	1	+	38962367	39038543	789624	21	109,134,93,78,105,62,70,60,113,97,159,211,125,55,96,95,78,130,82,112,1223,	0,6782,10260,21400,26514,29155,30057,32522,39431,40473,41450,43847,47981,52581,56505,59542,61391,62931,66119,71907,76200,
#Partially deleted in new
chr20	38962334	39039723	chr20:38962334-39039723	3	+	38962367	39038543	789624	22	73,134,93,78,105,62,70,60,113,97,159,211,125,55,96,95,78,130,82,72,112,1225,	0,6746,10224,21364,26478,29119,30021,32486,39395,40437,41414,43811,47945,52545,56469,59506,61355,62895,66083,68369,71871,76164,
#Partially deleted in new
chr20	38962343	39038847	chr20:38962343-39038847	1	+	38962367	39038543	789624	21	64,134,78,105,62,70,60,113,97,159,211,125,55,96,95,78,130,82,72,112,349,	0,6737,21355,26469,29110,30012,32477,39386,40428,41405,43802,47936,52536,56460,59497,61346,62886,66074,68360,71862,76155,
#Partially deleted in new
chr20	38962359	39039721	chr20:38962359-39039721	0	+	38962367	38988828	789624	22	48,134,93,78,125,62,70,60,113,97,159,211,125,55,96,95,78,130,82,72,112,1223,	0,6721,10199,21339,26433,29094,29996,32461,39370,40412,41389,43786,47920,52520,56444,59481,61330,62870,66058,68344,71846,76139,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	38962471	38962993	chr20:38962471-38962993	3	+	38962471	38962471	8553170	1	522,	0,
#Partially deleted in new
chr20	38977710	38978422	chr20:38977710-38978422	7	-	38977710	38977710	16724991	1	712,	0,
#Partially deleted in new
chr20	39021872	39038646	chr20:39021872-39038646	0	+	39021872	39038543	789624	6	63,130,82,72,112,148,	0,3357,6545,8831,12333,16626,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	39029177	39039723	chr20:39029177-39039723	0	+	39029177	39029177	8553170	3	1598,135,1225,	0,5005,9321,
#Partially deleted in new
chr20	39030359	39038636	chr20:39030359-39038636	0	+	39030359	39030359	8553170	3	416,112,138,	0,3846,8139,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	39213776	39224748	chr20:39213776-39224748	3	-	39213776	39213776	5263520	4	1042,116,166,194,	0,1770,2170,10778,
#Deleted in new
chr20	39329013	39329924	chr20:39329013-39329924	7	-	39329013	39329013	16724991	1	911,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	39349093	39349392	chr20:39349093-39349392	3	-	39349093	39349093	8553170	1	299,	0,
#Partially deleted in new
chr20	39785720	39813229	chr20:39785720-39813229	3	+	39785720	39785720	8553170	2	211,269,	0,27240,
#Partially deleted in new
chr20	39932921	39933239	chr20:39932921-39933239	7	-	39932921	39932921	16724991	1	318,	0,
#Partially deleted in new
chr20	40004476	40008245	chr20:40004476-40008245	0	+	40004476	40004476	789624	3	15,180,343,	0,1786,3426,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	40004483	40008529	chr20:40004483-40008529	3	+	40004483	40004483	789624	3	8,96,627,	0,1779,3419,
#Partially deleted in new
chr20	40031584	40043889	chr20:40031584-40043889	3	+	40031584	40031584	8553170	3	103,119,418,	0,2576,11887,
#Partially deleted in new
chr20	40121040	40126357	chr20:40121040-40126357	3	+	40121040	40121040	8553170	3	38,225,163,	0,3349,5154,
#Deleted in new
chr20	40685847	40689240	chr20:40685847-40689240	3	-	40687878	40688850	789624	1	3393,	0,
#Deleted in new
chr20	40696498	40698616	chr20:40696498-40698616	3	-	40696498	40696498	8553170	2	1624,45,	0,2073,
#Deleted in new
chr20	40854118	40854229	chr20:40854118-40854229	7	-	40854118	40854118	16724991	1	111,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	41024204	41024394	chr20:41024204-41024394	3	+	41024204	41024204	8553170	1	190,	0,
#Partially deleted in new
chr20	41028817	41124487	chr20:41028817-41124487	3	+	41029067	41123297	0	21	283,25,97,124,56,96,76,107,116,122,123,188,145,144,186,69,115,128,95,150,1293,	0,613,32576,47353,48764,51267,52347,55644,63654,68402,69397,71238,72391,83964,85152,86553,87460,89351,92878,93188,94377,
#Partially deleted in new
chr20	41136959	41175721	chr20:41136959-41175721	3	+	41137641	41174509	0	33	76,338,153,94,48,85,84,35,73,102,119,86,121,169,123,102,188,201,120,181,78,104,97,70,158,97,225,149,115,162,89,188,1255,	0,561,22646,22910,23146,25492,25682,25998,26243,26418,26755,26961,27121,27973,28285,28490,28679,29234,29516,29719,30892,31807,32119,32497,33152,35233,35461,35769,36460,36692,36963,37164,37507,
#Partially deleted in new
chr20	41137236	41177626	chr20:41137236-41177626	1	+	41137641	41174509	0	32	622,153,94,48,85,84,35,73,102,119,86,121,169,123,102,188,201,120,181,78,104,97,70,158,97,225,149,115,162,89,185,3160,	0,22369,22633,22869,25215,25405,25721,25966,26141,26478,26684,26844,27696,28008,28213,28402,28957,29239,29442,30615,31530,31842,32220,32875,34956,35184,35492,36183,36415,36686,36890,37230,
#Partially deleted in new
chr20	41137549	41159823	chr20:41137549-41159823	0	+	41137549	41137549	8553170	2	309,218,	0,22056,
#Partially deleted in new
chr20	41137731	41162647	chr20:41137731-41162647	0	+	41137731	41137731	8553170	6	127,153,94,48,163,6,	0,21874,22138,22374,24642,24910,
#Deleted in new
chr20	41162961	41163982	chr20:41162961-41163982	0	+	41162961	41162961	8553170	4	314,102,119,62,	0,416,753,959,
#Deleted in new
chr20	41163173	41164005	chr20:41163173-41164005	0	+	41163173	41163173	8553170	3	306,119,85,	0,541,747,
#Deleted in new
chr20	41165279	41165860	chr20:41165279-41165860	0	+	41165279	41165279	8553170	3	88,102,222,	0,170,359,
#Deleted in new
chr20	41165806	41166880	chr20:41165806-41166880	0	+	41165806	41165806	8553170	4	20,201,120,202,	0,387,669,872,
#Deleted in new
chr20	41166727	41169628	chr20:41166727-41169628	0	+	41166727	41166727	8553170	5	132,78,104,97,172,	0,1124,2039,2351,2729,
#Deleted in new
chr20	41167656	41170618	chr20:41167656-41170618	0	+	41167656	41167656	8553170	5	273,104,97,70,507,	0,1110,1422,1800,2455,
#Deleted in new
chr20	41167915	41170910	chr20:41167915-41170910	0	+	41167915	41167915	8553170	5	14,104,97,70,799,	0,851,1163,1541,2196,
#Deleted in new
chr20	41168798	41170251	chr20:41168798-41170251	0	+	41168798	41168798	8553170	4	72,97,70,91,	0,280,658,1362,
#Partially deleted in new
chr20	41168840	41176281	chr20:41168840-41176281	0	+	41168840	41176134	789624	5	30,97,70,158,189,	0,238,616,1271,7252,
#Deleted in new
chr20	41169022	41169078	chr20:41169022-41169078	3	+	41169022	41169022	5263520	1	56,	0,
#Partially deleted in new
chr20	41170188	41182989	chr20:41170188-41182989	0	+	41170188	41172492	789624	7	81,225,149,115,162,89,59,	0,2232,2540,3231,3463,3734,12742,
#Deleted in new
chr20	41172410	41174312	chr20:41172410-41174312	0	+	41172410	41172410	8553170	6	235,149,115,162,89,186,	0,318,1009,1241,1512,1716,
#Partially deleted in new
chr20	41172438	41182989	chr20:41172438-41182989	0	+	41172438	41172438	8553170	7	207,149,115,162,89,188,59,	0,290,981,1213,1484,1685,10492,
#Partially deleted in new
chr20	41172515	41182989	chr20:41172515-41182989	0	+	41172515	41180518	789624	7	130,149,115,162,89,161,59,	0,213,904,1136,1407,7988,10415,
#Partially deleted in new
chr20	41173506	41182960	chr20:41173506-41182960	0	+	41173506	41173506	8553170	6	28,162,89,188,73,30,	0,145,416,617,960,9424,
#Partially deleted in new
chr20	41173730	41182960	chr20:41173730-41182960	0	+	41173730	41174509	789624	6	83,89,185,501,68,30,	0,192,396,736,2022,9200,
#Partially deleted in new
chr20	41173803	41182989	chr20:41173803-41182989	0	+	41173803	41174509	789624	6	10,89,185,501,161,59,	0,119,323,663,6700,9127,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	41178447	41300078	chr20:41178447-41300078	1	-	41185190	41204916	0	5	6754,3010,48,105,113,	0,23609,76140,90531,121518,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	41178447	41204041	chr20:41178447-41204041	0	-	41201334	41204041	789624	3	6754,99,1985,	0,22838,23609,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	41182113	41300087	chr20:41182113-41300087	1	-	41184925	41204916	789624	6	3088,822,109,48,94,122,	0,22131,56574,72474,86876,117852,
#Partially deleted in new
chr20	41182114	41317602	chr20:41182114-41317602	3	-	41185190	41204916	0	4	3087,3010,105,94,	0,19942,86864,135394,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	41184367	41272258	chr20:41184367-41272258	1	-	41184925	41204916	0	5	834,2784,166,94,55,	0,17915,29366,84622,87836,
#Partially deleted in new
chr20	41184819	41202396	chr20:41184819-41202396	0	-	41184925	41202396	789624	2	376,114,	0,17463,
#Partially deleted in new
chr20	41184820	41317186	chr20:41184820-41317186	1	-	41184925	41204916	789624	3	381,822,325,	0,19424,132041,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	41184826	41300094	chr20:41184826-41300094	1	-	41185190	41204916	0	8	375,3010,166,109,107,150,94,129,	0,17230,28907,53861,54771,82636,84163,115139,
#Partially deleted in new
chr20	41184915	41300126	chr20:41184915-41300126	1	-	41185190	41204916	0	4	286,3010,94,161,	0,17141,84074,115050,
#Deleted in new
chr20	41196646	41196938	chr20:41196646-41196938	7	-	41196646	41196646	16724991	1	292,	0,
#Deleted in new
chr20	41196690	41197157	chr20:41196690-41197157	7	+	41196690	41196690	16724991	1	467,	0,
#Partially deleted in new
chr20	41204561	41317597	chr20:41204561-41317597	0	-	41204561	41204916	789624	3	505,94,89,	0,64428,112947,
#Partially deleted in new
chr20	41204627	41300078	chr20:41204627-41300078	0	-	41204627	41204916	789624	3	439,105,113,	0,64351,95338,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	41204647	41300078	chr20:41204647-41300078	0	-	41204647	41204916	789624	4	419,166,94,113,	0,9086,64342,95318,
#Partially deleted in new
chr20	41204773	41300074	chr20:41204773-41300074	0	-	41204773	41204916	789624	5	293,109,107,94,109,	0,33914,34824,64216,95192,
#Partially deleted in new
chr20	41204777	41272253	chr20:41204777-41272253	0	-	41204777	41204916	789624	4	289,94,75,115,	0,64212,64633,67361,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	41213757	41300090	chr20:41213757-41300090	0	-	41213757	41213757	8553170	4	142,150,105,125,	0,53705,55221,86208,
#Partially deleted in new
chr20	41238726	41272245	chr20:41238726-41272245	0	-	41238726	41238726	8553170	5	70,107,150,94,107,	0,871,28736,30263,33412,
#Partially deleted in new
chr20	41268980	41300117	chr20:41268980-41300117	0	-	41268980	41268980	8553170	2	103,152,	0,30985,
#Partially deleted in new
chr20	41268989	41300127	chr20:41268989-41300127	0	-	41268989	41268989	8553170	2	94,162,	0,30976,
#Partially deleted in new
chr20	41268989	41317672	chr20:41268989-41317672	0	-	41268989	41268989	8553170	2	94,164,	0,48519,
#Partially deleted in new
chr20	41268989	41272273	chr20:41268989-41272273	0	-	41268989	41268989	8553170	2	94,347,	0,2937,
#Partially deleted in new
chr20	41268989	41272264	chr20:41268989-41272264	0	-	41268989	41268989	8553170	3	94,75,61,	0,421,3214,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	41290279	41290577	chr20:41290279-41290577	3	-	41290279	41290279	8553170	1	298,	0,
#Deleted in new
chr20	41331122	41331660	chr20:41331122-41331660	7	+	41331122	41331122	16724991	1	538,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr20	41340919	41360582	chr20:41340919-41360582	1	+	41345803	41358866	789624	20	83,200,96,269,81,121,343,100,161,94,70,93,44,139,149,87,153,115,104,1861,	0,4876,6632,7699,8172,8854,9135,10901,11140,11686,11878,13725,13900,14976,16120,16441,16962,17317,17519,17802,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr20	41340971	41360400	chr20:41340971-41360400	3	+	41345803	41358866	789624	20	31,200,96,269,84,121,343,100,161,94,70,93,44,139,149,87,153,115,104,1679,	0,4824,6580,7647,8117,8802,9083,10849,11088,11634,11826,13673,13848,14924,16068,16389,16910,17265,17467,17750,
#Partially deleted in new
chr20	41352680	41358470	chr20:41352680-41358470	0	+	41352680	41358470	789624	9	19,70,44,139,149,87,153,115,32,	0,117,2139,3215,4359,4680,5201,5556,5758,
#Deleted in new
chr20	41357110	41358829	chr20:41357110-41358829	0	+	41357110	41357110	8553170	6	78,87,76,115,104,108,	0,250,771,1126,1328,1611,
#Deleted in new
chr20	41357975	41358893	chr20:41357975-41358893	0	+	41357975	41357975	8553170	3	376,104,172,	0,463,746,
#Partially deleted in new
chr20	41359965	41366827	chr20:41359965-41366827	3	-	41361267	41366634	789624	4	3089,224,123,360,	0,3672,5069,6502,
#Deleted in new
chr20	41382382	41383107	chr20:41382382-41383107	7	+	41382382	41382382	16724991	1	725,	0,
#Partially deleted in new
chr20	41402100	41618494	chr20:41402100-41618494	3	-	41404592	41551337	0	37	3389,120,192,453,207,152,1572,209,217,61,61,130,104,90,160,200,203,111,180,165,196,211,256,144,177,244,122,135,87,118,59,63,150,148,521,56,155,	0,10043,11223,13085,14487,15097,18407,21391,23077,23992,35173,37899,43564,45781,48845,49725,50639,52525,53699,55163,71221,81208,82251,85564,86327,87677,89597,91437,91757,95283,96067,97194,110745,112704,130949,149204,216239,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	41404522	41415065	chr20:41404522-41415065	0	-	41404522	41404522	8553170	3	967,120,1742,	0,7621,8801,
#Partially deleted in new
chr20	41426141	41499317	chr20:41426141-41499317	0	-	41437319	41499317	789624	15	12,59,130,104,90,160,200,92,244,122,135,87,118,59,23,	0,11132,13858,19523,21740,24804,25684,62371,63636,65556,67396,67716,71242,72026,73153,
#Partially deleted in new
chr20	41437261	41499317	chr20:41437261-41499317	1	-	41437319	41497473	789624	14	71,130,104,90,160,200,92,244,122,135,87,118,59,23,	0,2738,8403,10620,13684,14564,51251,52516,54436,56276,56596,60122,60906,62033,
#Partially deleted in new
chr20	41459353	41461944	chr20:41459353-41461944	7	-	41459353	41459353	16724991	2	96,227,	0,2364,
#Partially deleted in new
chr20	41473022	41484507	chr20:41473022-41484507	0	-	41473022	41473022	8553170	3	495,211,156,	0,10286,11329,
#Deleted in new
chr20	41485570	41486225	chr20:41485570-41486225	3	-	41485570	41485570	8553170	1	655,	0,
#Partially deleted in new
chr20	41496808	41618375	chr20:41496808-41618375	1	-	41498124	41564148	0	7	1418,63,150,148,521,141,36,	0,2486,16037,17996,36241,67202,121531,
#Partially deleted in new
chr20	41496808	41533285	chr20:41496808-41533285	0	-	41496808	41496808	8553170	6	693,59,63,150,148,236,	0,1359,2486,16037,17996,36241,
#Partially deleted in new
chr20	41514919	41618384	chr20:41514919-41618384	0	-	41514919	41514919	8553170	3	33,521,45,	0,18130,103420,
#Partially deleted in new
chr20	41533155	41614773	chr20:41533155-41614773	0	-	41533155	41551337	789624	3	415,56,65,	0,18149,81553,
#Deleted in new
chr20	41547421	41547922	chr20:41547421-41547922	7	+	41547421	41547421	16724991	1	501,	0,
#Partially deleted in new
chr20	41684985	41685091	chr20:41684985-41685091	3	-	41684985	41684985	8553170	1	106,	0,
#Deleted in new
chr20	41712478	41712600	chr20:41712478-41712600	3	-	41712478	41712478	8553170	1	122,	0,
#Partially deleted in new
chr20	41991139	42063969	chr20:41991139-42063969	3	+	41991139	41991139	8553170	2	131,463,	0,72367,
#Deleted in new
chr20	41997130	41999397	chr20:41997130-41999397	7	-	41997130	41997130	16724991	1	2267,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	42014033	42015478	chr20:42014033-42015478	3	-	42014033	42014033	8553170	3	224,136,57,	0,507,1388,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr20	42072751	43189733	chr20:42072751-43189733	1	-	42080878	43189733	789624	31	8181,136,164,126,132,174,150,136,155,117,98,37,77,88,191,149,136,57,37,274,103,202,110,297,294,175,116,82,272,126,88,	0,9130,11930,12976,25669,29372,31817,34034,37581,42447,45651,47183,56002,69163,88600,126488,175935,197645,209737,242971,277876,279332,375468,399514,605114,683710,698683,707466,718443,813055,1116894,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr20	42072751	43189733	chr20:42072751-43189733	1	-	42080878	43189733	789624	31	8181,136,164,126,132,174,150,136,155,117,60,98,37,77,88,191,149,136,37,274,103,202,110,297,294,175,116,82,272,126,88,	0,9130,11930,12976,25669,29372,31817,34034,37581,42447,43287,45651,47183,56002,69163,88600,126488,175935,209737,242971,277876,279332,375468,399514,605114,683710,698683,707466,718443,813055,1116894,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr20	42072751	43189733	chr20:42072751-43189733	3	-	42080878	43189733	0	31	8181,136,164,126,132,174,150,136,155,117,98,37,77,88,191,149,30,136,37,274,103,202,110,297,294,175,116,82,272,126,88,	0,9130,11930,12976,25669,29372,31817,34034,37581,42447,45651,47183,56002,69163,88600,126488,163477,175935,209737,242971,277876,279332,375468,399514,605114,683710,698683,707466,718443,813055,1116894,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr20	42072751	43189842	chr20:42072751-43189842	1	-	42080878	43189733	789624	31	8181,136,164,126,132,174,150,136,155,117,98,37,77,88,188,149,30,136,37,274,103,202,110,297,294,175,116,82,272,126,197,	0,9130,11930,12976,25669,29372,31817,34034,37581,42447,45651,47183,56002,69163,88600,126488,163477,175935,209737,242971,277876,279332,375468,399514,605114,683710,698683,707466,718443,813055,1116894,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr20	42072751	43189969	chr20:42072751-43189969	1	-	42080878	43189733	789624	32	8181,136,164,126,132,174,150,136,155,117,98,37,77,88,191,149,30,136,57,37,274,103,202,110,297,294,175,116,82,272,126,324,	0,9130,11930,12976,25669,29372,31817,34034,37581,42447,45651,47183,56002,69163,88600,126488,163477,175935,197645,209737,242971,277876,279332,375468,399514,605114,683710,698683,707466,718443,813055,1116894,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr20	42072751	43189970	chr20:42072751-43189970	1	-	42080878	43189733	789624	30	8181,136,164,126,132,174,150,136,155,117,98,37,77,88,191,149,136,37,274,103,202,110,297,294,175,116,82,272,126,325,	0,9130,11930,12976,25669,29372,31817,34034,37581,42447,45651,47183,56002,69163,88600,126488,175935,209737,242971,277876,279332,375468,399514,605114,683710,698683,707466,718443,813055,1116894,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr20	42072773	43189917	chr20:42072773-43189917	1	-	42080878	43189733	0	32	8159,136,164,126,132,174,150,136,155,117,98,37,77,88,191,158,30,136,57,37,274,103,202,110,297,294,175,116,82,272,126,272,	0,9108,11908,12954,25647,29350,31795,34012,37559,42425,45629,47161,55980,69141,88578,126466,163455,175913,197623,209715,242949,277854,279310,375446,399492,605092,683688,698661,707444,718421,813033,1116872,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr20	42072773	42472569	chr20:42072773-42472569	1	-	42080878	42472569	789624	24	8159,136,164,126,132,174,150,136,155,117,98,37,77,88,191,149,30,136,37,274,103,202,110,304,	0,9108,11908,12954,25647,29350,31795,34012,37559,42425,45629,47161,55980,69141,88578,126466,163455,175913,209715,242949,277854,279310,375446,399492,
#Partially deleted in new
chr20	42080878	43189917	chr20:42080878-43189917	0	-	42885878	43189733	789624	31	54,136,164,126,132,174,150,136,155,117,98,37,77,88,191,158,30,136,37,274,103,202,110,297,294,175,116,82,272,126,274,	0,1003,3803,4849,17542,21245,23690,25907,29454,34320,37524,39056,47875,61036,80473,118361,155350,167808,201610,234844,269749,271205,367341,391387,596987,675583,690556,699339,710316,804928,1108765,
#Partially deleted in new
chr20	42080878	42472562	chr20:42080878-42472562	1	-	42080878	42472562	789624	25	54,136,164,126,132,174,150,136,155,117,98,37,77,88,191,149,30,136,57,37,274,103,202,110,297,	0,1003,3803,4849,17542,21245,23690,25907,29454,34320,37524,39056,47875,61036,80473,118361,155350,167808,189518,201610,234844,269749,271205,367341,391387,
#Partially deleted in new
chr20	42606693	42607559	chr20:42606693-42607559	7	+	42606693	42606693	16724991	2	182,166,	0,700,
#Partially deleted in new
chr20	42677865	42791467	chr20:42677865-42791467	1	-	42677865	42791467	789624	5	294,175,116,82,273,	0,78596,93569,102352,113329,
#Deleted in new
chr20	42685403	42686217	chr20:42685403-42686217	0	+	42685403	42685403	8553170	3	329,174,70,	0,482,744,
#Partially deleted in new
chr20	42685482	42688562	chr20:42685482-42688562	3	+	42685482	42685482	789624	4	349,115,165,1366,	0,462,665,1714,
#Partially deleted in new
chr20	42885841	42966419	chr20:42885841-42966419	0	-	42885841	42885841	8553170	2	91,117,	0,80461,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	42968742	42971492	chr20:42968742-42971492	3	+	42968742	42968742	789624	2	919,667,	0,2083,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	43063325	43063609	chr20:43063325-43063609	3	+	43063325	43063325	8553170	1	284,	0,
#Partially deleted in new
chr20	43190100	43202599	chr20:43190100-43202599	3	+	43190100	43190100	8553170	3	150,78,2004,	0,4876,10495,
#Partially deleted in new
chr20	43190221	43201371	chr20:43190221-43201371	0	+	43190221	43190221	8553170	2	29,776,	0,10374,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	43222205	43222509	chr20:43222205-43222509	3	+	43222205	43222205	8553170	1	304,	0,
#Deleted in new
chr20	43230759	43231260	chr20:43230759-43231260	7	+	43230759	43230759	16724991	1	501,	0,
#Deleted in new
chr20	43304554	43304679	chr20:43304554-43304679	3	+	43304554	43304554	8553170	1	125,	0,
#Deleted in new
chr20	43388641	43389041	chr20:43388641-43389041	7	-	43388641	43388641	16724991	1	400,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	43405472	43405578	chr20:43405472-43405578	3	+	43405472	43405472	8553170	1	106,	0,
#Deleted in new
chr20	43423195	43423538	chr20:43423195-43423538	7	-	43423195	43423195	16724991	1	343,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	43451158	43451260	chr20:43451158-43451260	3	-	43451158	43451158	8553170	1	102,	0,
#Deleted in new
chr20	43457927	43464247	chr20:43457927-43464247	3	+	43458033	43461063	789624	6	213,149,125,209,84,3545,	0,433,1843,2105,2587,2775,
#Deleted in new
chr20	43457927	43461334	chr20:43457927-43461334	0	+	43458033	43459304	789624	7	213,149,268,125,209,84,632,	0,433,1225,1843,2105,2587,2775,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	43473012	43473119	chr20:43473012-43473119	3	+	43473012	43473012	8553170	1	107,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr20	43489441	43541813	chr20:43489441-43541813	2	+	43514544	43532822	8553170	19	6,332,151,124,85,89,105,136,152,77,86,111,115,100,198,50,158,63,880,	0,25003,25567,25850,26651,39215,39822,40842,43331,43900,44566,44842,45386,46395,46655,46967,50709,51311,51492,
#Partially deleted in new
chr20	43507679	43515150	chr20:43507679-43515150	0	+	43514664	43515150	789624	4	65,224,142,142,	0,6158,6955,7329,
#Partially deleted in new
chr20	43507685	43540934	chr20:43507685-43540934	0	+	43513503	43518701	789624	23	59,164,224,142,151,124,85,97,89,105,136,92,152,77,86,111,115,100,198,50,158,63,1,	0,5790,6152,6949,7323,7606,8407,10921,20971,21578,22598,23112,25087,25656,26322,26598,27142,28151,28411,28723,32465,33067,33248,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr20	43507687	43541836	chr20:43507687-43541836	1	+	43513503	43541128	0	22	57,164,224,142,151,124,85,89,105,136,92,152,77,86,111,115,100,198,50,158,63,903,	0,5788,6150,6947,7321,7604,8405,20969,21576,22596,23110,25085,25654,26320,26596,27140,28149,28409,28721,32463,33065,33246,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr20	43507695	43541852	chr20:43507695-43541852	1	+	43529305	43540908	8553170	15	49,89,105,136,92,152,77,86,111,115,100,198,50,158,1100,	0,20961,21568,22588,23102,25077,25646,26312,26588,27132,28141,28401,28713,32455,33057,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr20	43507709	43541603	chr20:43507709-43541603	1	+	43513569	43541128	789624	22	35,81,224,142,151,124,85,89,105,136,92,152,77,86,111,115,100,198,50,158,63,670,	0,5849,6128,6925,7299,7582,8383,20947,21554,22574,23088,25063,25632,26298,26574,27118,28127,28387,28699,32441,33043,33224,
#Partially deleted in new
chr20	43507713	43550910	chr20:43507713-43550910	1	+	43513503	43548245	8553170	21	31,164,224,142,151,124,85,89,105,136,92,152,77,86,111,115,100,198,50,158,2800,	0,5762,6124,6921,7295,7578,8379,20943,21550,22570,23084,25059,25628,26294,26570,27114,28123,28383,28695,32437,40397,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr20	43513954	43541876	chr20:43513954-43541876	0	+	43513954	43529220	8553170	19	107,142,151,124,85,89,166,606,152,77,86,130,115,100,198,50,158,63,943,	0,680,1054,1337,2138,14702,15248,16329,18818,19387,20053,20310,20873,21882,22142,22454,26196,26798,26979,
#Partially deleted in new
chr20	43514407	43550681	chr20:43514407-43550681	0	+	43514544	43515964	8553170	16	369,151,259,89,166,136,77,86,111,115,100,194,50,158,63,2571,	0,601,1511,14249,14795,15876,18934,19600,19876,20420,21429,21693,22001,25743,26345,33703,
#Partially deleted in new
chr20	43514442	43550950	chr20:43514442-43550950	1	+	43514544	43548245	789624	19	334,151,124,85,89,105,136,92,152,77,86,111,115,100,198,50,158,63,2840,	0,566,849,1650,14214,14821,15841,16355,18330,18899,19565,19841,20385,21394,21654,21966,25708,26310,33668,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	43514442	43531589	chr20:43514442-43531589	0	+	43514442	43514442	8553170	5	334,1169,89,105,1306,	0,566,14214,14821,15841,
#Partially deleted in new
chr20	43514450	43515565	chr20:43514450-43515565	0	+	43514450	43514450	8553170	3	326,151,274,	0,558,841,
#Partially deleted in new
chr20	43514468	43541163	chr20:43514468-43541163	0	+	43514468	43514468	8553170	16	308,151,124,85,712,136,152,77,86,111,115,100,198,50,158,411,	0,540,823,1624,14188,15815,18304,18873,19539,19815,20359,21368,21628,21940,25682,26284,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr20	43514470	43550941	chr20:43514470-43550941	0	+	43514470	43514470	8553170	17	306,151,124,85,89,105,2641,77,86,111,115,100,198,50,158,63,2795,	0,538,821,1622,14186,14793,15813,18871,19537,19813,20357,21366,21626,21938,25680,26282,33676,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr20	43514471	43542581	chr20:43514471-43542581	0	+	43514544	43532822	8553170	17	305,151,124,85,89,105,136,152,77,86,111,115,100,198,50,158,1829,	0,537,820,1621,14185,14792,15812,18301,18870,19536,19812,20356,21365,21625,21937,25679,26281,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	43514495	43531987	chr20:43514495-43531987	0	+	43514495	43514495	8553170	7	281,151,124,85,89,105,1596,	0,513,796,1597,14161,14768,15896,
#Partially deleted in new
chr20	43514510	43541120	chr20:43514510-43541120	0	+	43514544	43529220	8553170	17	266,151,124,85,89,166,136,152,77,86,111,115,100,198,50,287,368,	0,498,781,1582,14146,14692,15773,18262,18831,19497,19773,20317,21326,21586,21898,25511,26242,
#Partially deleted in new
chr20	43514518	43541163	chr20:43514518-43541163	0	+	43514544	43529220	8553170	16	258,151,124,85,89,166,136,152,77,86,111,115,100,362,158,411,	0,490,773,1574,14138,14684,15765,18254,18823,19489,19765,20309,21318,21578,25632,26234,
#Partially deleted in new
chr20	43514520	43541189	chr20:43514520-43541189	1	+	43514544	43541128	0	19	256,151,124,85,89,105,136,92,152,77,86,111,115,100,198,50,158,63,256,	0,488,771,1572,14136,14743,15763,16277,18252,18821,19487,19763,20307,21316,21576,21888,25630,26232,26413,
#Partially deleted in new
chr20	43514525	43541189	chr20:43514525-43541189	1	+	43514544	43540908	789624	18	251,151,124,85,89,105,136,92,152,77,86,111,115,100,213,50,158,437,	0,483,766,1567,14131,14738,15758,16272,18247,18816,19482,19758,20302,21311,21556,21883,25625,26227,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	43514538	43518830	chr20:43514538-43518830	0	+	43514538	43514538	8553170	3	238,151,3539,	0,470,753,
#Partially deleted in new
chr20	43514548	43529231	chr20:43514548-43529231	0	+	43514548	43514548	8553170	5	228,151,85,89,29,	0,460,1544,14108,14654,
#Partially deleted in new
chr20	43514707	43540997	chr20:43514707-43540997	0	+	43514707	43515921	8553170	16	69,151,124,259,89,166,136,77,86,111,115,100,198,50,158,245,	0,301,584,1211,13949,14495,15576,18634,19300,19576,20120,21129,21389,21701,25443,26045,
#Partially deleted in new
chr20	43514953	43550927	chr20:43514953-43550927	0	+	43514953	43514953	8553170	17	206,124,85,89,105,136,152,77,86,111,115,100,198,50,287,63,2817,	0,338,1139,13703,14310,15330,17819,18388,19054,19330,19874,20883,21143,21455,25068,25799,33157,
#Partially deleted in new
chr20	43515025	43541173	chr20:43515025-43541173	0	+	43515025	43529220	789624	16	134,124,85,89,166,136,152,77,86,111,115,100,198,50,158,421,	0,266,1067,13631,14177,15258,17747,18316,18982,19258,19802,20811,21071,21383,25125,25727,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr20	43515054	43541836	chr20:43515054-43541836	0	+	43515054	43536206	8553170	17	105,124,85,89,105,136,92,152,77,86,111,115,100,358,158,63,903,	0,237,1038,13602,14209,15229,15743,17718,18287,18953,19229,19773,20782,21046,25096,25698,25879,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	43515848	43541017	chr20:43515848-43541017	0	+	43515848	43515848	8553170	13	329,89,166,2641,77,86,659,100,198,50,158,63,84,	0,12808,13354,14435,17493,18159,18435,19988,20248,20560,24302,24904,25085,
#Partially deleted in new
chr20	43523260	43523572	chr20:43523260-43523572	7	-	43523260	43523260	16724991	1	312,	0,
#Partially deleted in new
chr20	43528656	43534403	chr20:43528656-43534403	0	+	43528656	43528656	8553170	3	89,77,396,	0,4685,5351,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	43530971	43541189	chr20:43530971-43541189	0	+	43530971	43530971	8553170	10	1953,77,86,111,115,100,198,50,158,437,	0,2370,3036,3312,3856,4865,5125,5437,9179,9781,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	43536132	43541871	chr20:43536132-43541871	0	+	43536132	43541128	8553170	5	162,50,158,45,938,	0,276,4018,4638,4801,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	43538974	43541894	chr20:43538974-43541894	0	+	43538974	43538974	8553170	3	1334,63,961,	0,1778,1959,
#Partially deleted in new
chr20	43540150	43548306	chr20:43540150-43548306	0	+	43540150	43540150	8553170	2	158,160,	0,7996,
#Partially deleted in new
chr20	43540170	43569498	chr20:43540170-43569498	3	+	43540170	43566499	789624	7	138,63,59,50,58,84,114,	0,582,26302,26897,27494,27745,29214,
#Deleted in new
chr20	43549388	43550949	chr20:43549388-43550949	3	-	43549388	43549388	8553170	2	173,345,	0,1216,
#Partially deleted in new
chr20	43558967	43566531	chr20:43558967-43566531	0	+	43566495	43566531	8553170	3	192,245,59,	0,6074,7505,
#Partially deleted in new
chr20	43559026	43585300	chr20:43559026-43585300	0	+	43566495	43583320	789624	14	133,59,50,58,84,132,113,37,87,96,156,90,192,449,	0,7446,8041,8638,8889,10358,11590,11997,13024,15882,17197,20945,24156,25825,
#Partially deleted in new
chr20	43559032	43570998	chr20:43559032-43570998	1	+	43566495	43570733	8553170	7	127,59,50,58,84,129,382,	0,7440,8035,8632,8883,10355,11584,
#Partially deleted in new
chr20	43559036	43585677	chr20:43559036-43585677	3	+	43566495	43585016	789624	13	123,59,50,58,84,132,113,37,87,96,156,90,826,	0,7436,8031,8628,8879,10348,11580,11987,13014,15872,17187,20935,25815,
#Partially deleted in new
chr20	43559041	43576378	chr20:43559041-43576378	0	+	43566495	43576378	8553170	11	118,59,50,58,84,129,113,37,87,96,155,	0,7431,8026,8623,8874,10346,11575,11982,13009,15867,17182,
#Partially deleted in new
chr20	43559065	43588237	chr20:43559065-43588237	0	+	43566495	43579976	789624	14	94,59,50,58,84,132,113,37,87,96,160,90,718,593,	0,7407,8002,8599,8850,10319,11551,11958,12985,15843,17158,20906,25786,28579,
#Partially deleted in new
chr20	43559071	43585627	chr20:43559071-43585627	1	+	43566495	43585016	789624	13	88,59,50,58,84,132,113,37,87,96,156,90,776,	0,7401,7996,8593,8844,10313,11545,11952,12979,15837,17152,20900,25780,
#Partially deleted in new
chr20	43559075	43570998	chr20:43559075-43570998	1	+	43566495	43570733	8553170	7	84,59,50,58,84,132,382,	0,7397,7992,8589,8840,10309,11541,
#Deleted in new
chr20	43564785	43566525	chr20:43564785-43566525	0	+	43566495	43566525	789624	2	501,53,	0,1687,
#Partially deleted in new
chr20	43565114	43585632	chr20:43565114-43585632	1	+	43566495	43585016	789624	13	172,59,50,58,84,132,113,37,87,96,156,90,781,	0,1358,1953,2550,2801,4270,5502,5909,6936,9794,11109,14857,19737,
#Partially deleted in new
chr20	43565184	43569643	chr20:43565184-43569643	0	+	43565184	43565184	8553170	6	102,59,50,58,84,259,	0,1288,1883,2480,2731,4200,
#Partially deleted in new
chr20	43565236	43572072	chr20:43565236-43572072	0	+	43566495	43572072	789624	9	50,59,50,58,48,132,113,37,22,	0,1236,1831,2428,2679,4148,5380,5787,6814,
#Partially deleted in new
chr20	43566096	43585633	chr20:43566096-43585633	1	+	43566315	43585016	789624	12	435,50,58,84,132,113,37,87,96,156,90,782,	0,971,1568,1819,3288,4520,4927,5954,8812,10127,13875,18755,
#Partially deleted in new
chr20	43566315	43585016	chr20:43566315-43585016	1	+	43566315	43585016	789624	13	55,59,50,58,84,132,113,37,87,96,156,90,165,	0,157,752,1349,1600,3069,4301,4708,5735,8593,9908,13656,18536,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	43574376	43580671	chr20:43574376-43580671	0	+	43574376	43574376	8553170	3	628,156,700,	0,1847,5595,
#Deleted in new
chr20	43590008	43590596	chr20:43590008-43590596	3	-	43590008	43590008	8553170	1	588,	0,
#Partially deleted in new
chr20	43590930	43647296	chr20:43590930-43647296	3	+	43594698	43646983	789624	14	124,125,88,130,76,72,127,87,69,155,88,109,146,361,	0,3762,5504,12829,13252,14071,22919,28009,29926,32960,44995,46214,51548,56005,
#Partially deleted in new
chr20	43590989	43647222	chr20:43590989-43647222	1	+	43594698	43646983	789624	14	40,125,88,130,76,72,127,87,69,155,88,109,146,287,	0,3703,5445,12770,13193,14012,22860,27950,29867,32901,44936,46155,51489,55946,
#Partially deleted in new
chr20	43594721	43605073	chr20:43594721-43605073	0	+	43594721	43594721	8553170	3	96,88,72,	0,1713,10280,
#Partially deleted in new
chr20	43603873	43605216	chr20:43603873-43605216	0	+	43603873	43603873	8553170	3	16,76,215,	0,309,1128,
#Partially deleted in new
chr20	43613849	43624122	chr20:43613849-43624122	0	+	43613849	43613849	8553170	4	127,87,69,232,	0,5090,7007,10041,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	43613898	43637204	chr20:43613898-43637204	0	+	43613898	43613898	8553170	7	78,111,87,69,155,88,60,	0,4344,5041,6958,9992,22027,23246,
#Partially deleted in new
chr20	43613965	43621058	chr20:43613965-43621058	0	+	43613965	43613965	8553170	3	11,87,202,	0,4974,6891,
#Partially deleted in new
chr20	43637146	43647227	chr20:43637146-43647227	0	+	43637146	43637146	8553170	2	107,292,	0,9789,
#Partially deleted in new
chr20	43642157	43647217	chr20:43642157-43647217	0	+	43642157	43642157	8553170	2	467,282,	0,4778,
#Partially deleted in new
chr20	43652522	43653291	chr20:43652522-43653291	7	+	43652522	43652522	16724991	2	183,252,	0,517,
#Partially deleted in new
chr20	43667018	43716495	chr20:43667018-43716495	1	+	43667283	43716087	789624	13	285,94,93,221,163,288,414,140,100,114,105,150,537,	0,6787,15775,19833,25138,32738,35471,38200,42944,44469,45983,48115,48940,
#Partially deleted in new
chr20	43667156	43716496	chr20:43667156-43716496	3	+	43667283	43716087	789624	14	147,94,72,93,221,163,288,414,140,100,114,105,150,538,	0,6649,14627,15637,19695,25000,32600,35333,38062,42806,44331,45845,47977,48802,
#Deleted in new
chr20	43726163	43726998	chr20:43726163-43726998	3	-	43726247	43726694	789624	1	835,	0,
#Deleted in new
chr20	43726163	43726697	chr20:43726163-43726697	1	-	43726247	43726694	789624	2	177,282,	0,252,
#Deleted in new
chr20	43894719	43895468	chr20:43894719-43895468	3	+	43894719	43894719	789624	2	78,446,	0,303,
#Partially deleted in new
chr20	43914863	44069017	chr20:43914863-44069017	1	+	43914891	44068686	789624	9	127,66,246,240,228,81,396,128,368,	0,58503,91683,136442,139435,149913,150848,151866,153786,
#Partially deleted in new
chr20	43916149	44068914	chr20:43916149-44068914	1	+	43973393	44068686	789624	9	59,66,246,240,228,81,396,128,265,	0,57217,90397,135156,138149,148627,149562,150580,152500,
#Partially deleted in new
chr20	43916166	44069616	chr20:43916166-44069616	3	+	43973393	44068686	789624	10	42,125,66,246,240,228,81,396,128,967,	0,38981,57200,90380,135139,138132,148610,149545,150563,152483,
#Partially deleted in new
chr20	43945704	44069616	chr20:43945704-44069616	1	+	43945912	44068686	789624	8	334,66,246,240,228,396,128,967,	0,27662,60842,105601,108594,120007,121025,122945,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	44007247	44007537	chr20:44007247-44007537	3	+	44007247	44007247	8553170	1	290,	0,
#Partially deleted in new
chr20	44039003	44069612	chr20:44039003-44069612	0	+	44039003	44039003	8553170	7	226,240,228,81,396,128,963,	0,12302,15295,25773,26708,27726,29646,
#Partially deleted in new
chr20	44054350	44069616	chr20:44054350-44069616	0	+	44054350	44068936	789624	3	176,128,967,	0,12379,14299,
#Partially deleted in new
chr20	44111694	44187578	chr20:44111694-44187578	3	-	44114795	44186705	789624	6	1809,95,722,119,790,1252,	0,3087,3970,6810,47923,74632,
#Partially deleted in new
chr20	44176816	44187093	chr20:44176816-44187093	1	-	44177961	44186705	789624	2	1156,767,	0,9510,
#Partially deleted in new
chr20	44196495	44210791	chr20:44196495-44210791	3	-	44197051	44206957	789624	4	1244,114,118,96,	0,6465,10385,14200,
#Partially deleted in new
chr20	44196495	44210076	chr20:44196495-44210076	1	-	44197051	44206957	789624	6	1244,114,118,35,40,65,	0,6465,10385,10789,11058,13516,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	44210959	44226027	chr20:44210959-44226027	0	+	44210959	44210959	789624	3	118,116,1207,	0,3928,13861,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	44210991	44226027	chr20:44210991-44226027	3	+	44210991	44210991	8553170	4	86,116,154,1207,	0,3896,12727,13829,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	44211081	44226027	chr20:44211081-44226027	0	+	44211081	44211081	8553170	2	275,1207,	0,13739,
#Partially deleted in new
chr20	44247098	44280917	chr20:44247098-44280917	1	+	44257239	44279300	789624	6	104,193,174,98,115,1961,	0,10054,11335,16131,17346,31858,
#Partially deleted in new
chr20	44247246	44280373	chr20:44247246-44280373	3	+	44247334	44279300	789624	6	268,193,174,98,115,1417,	0,9906,11187,15983,17198,31710,
#Partially deleted in new
chr20	44247257	44280917	chr20:44247257-44280917	1	+	44247334	44279300	789624	6	257,193,231,98,115,1961,	0,9895,11119,15972,17187,31699,
#Partially deleted in new
chr20	44247257	44280917	chr20:44247257-44280917	1	+	44247334	44279300	789624	4	257,193,174,1961,	0,9895,11176,31699,
#Partially deleted in new
chr20	44247319	44279235	chr20:44247319-44279235	0	+	44247334	44279235	789624	5	195,193,98,115,279,	0,9833,15910,17125,31637,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	44247332	44258535	chr20:44247332-44258535	1	+	44247334	44258259	789624	3	182,193,347,	0,9820,10856,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	44247495	44264786	chr20:44247495-44264786	0	+	44247495	44264714	789624	5	19,193,174,98,342,	0,9657,10938,15734,16949,
#Partially deleted in new
chr20	44264453	44279933	chr20:44264453-44279933	0	+	44264453	44279767	789624	4	106,179,39,214,	0,14503,15129,15266,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	44302837	44311169	chr20:44302837-44311169	3	-	44306624	44311148	789624	2	4403,194,	0,8138,
#Partially deleted in new
chr20	44336985	44351235	chr20:44336985-44351235	3	+	44337157	44350792	789624	5	433,119,133,116,576,	0,4210,6391,8277,13674,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	44344838	44344933	chr20:44344838-44344933	3	+	44344838	44344838	8553170	1	95,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	44347551	44355185	chr20:44347551-44355185	3	-	44347551	44347551	8553170	4	267,237,83,167,	0,3068,4316,7467,
#Partially deleted in new
chr20	44350706	44352102	chr20:44350706-44352102	0	-	44350706	44350706	8553170	2	150,235,	0,1161,
#Partially deleted in new
chr20	44355699	44429671	chr20:44355699-44429671	1	+	44355804	44429665	0	10	154,175,95,107,156,88,156,237,153,149,	0,50358,51681,57994,58807,62725,64021,68318,72635,73823,
#Partially deleted in new
chr20	44355800	44429671	chr20:44355800-44429671	1	+	44355804	44429665	0	10	53,175,95,107,156,88,156,237,123,149,	0,50257,51580,57893,58706,62624,63920,68217,72534,73722,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	44355800	44424379	chr20:44355800-44424379	3	+	44355804	44424379	0	8	53,175,95,107,156,88,156,362,	0,50257,51580,57893,58706,62624,63920,68217,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	44355800	44432843	chr20:44355800-44432843	1	+	44390639	44429665	789624	11	53,222,175,95,107,156,88,156,237,153,3321,	0,34657,50257,51580,57893,58706,62624,63920,68217,72534,73722,
#Partially deleted in new
chr20	44355804	44407474	chr20:44355804-44407474	0	+	44390639	44407474	789624	4	49,222,175,94,	0,34653,50253,51576,
#Partially deleted in new
chr20	44372745	44384671	chr20:44372745-44384671	1	-	44372745	44372745	8553170	2	264,149,	0,11777,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	44377742	44395706	chr20:44377742-44395706	3	-	44377742	44377742	789624	4	142,150,102,254,	0,6780,14266,17710,
#Partially deleted in new
chr20	44389623	44391537	chr20:44389623-44391537	3	-	44389623	44389623	8553170	2	301,102,	0,1812,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	44401269	44431386	chr20:44401269-44431386	0	+	44401372	44406175	789624	11	218,91,175,95,107,156,88,156,237,153,1864,	0,1284,4788,6111,12424,13237,17155,18451,22748,27065,28253,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	44401283	44434596	chr20:44401283-44434596	1	+	44401372	44429665	0	10	204,175,95,107,156,88,156,237,153,5074,	0,4774,6097,12410,13223,17141,18437,22734,27051,28239,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	44401283	44424639	chr20:44401283-44424639	1	+	44401372	44424379	0	8	204,175,95,107,156,88,156,622,	0,4774,6097,12410,13223,17141,18437,22734,
#Partially deleted in new
chr20	44401300	44430500	chr20:44401300-44430500	1	+	44401372	44429665	0	10	187,175,95,107,156,88,156,237,123,978,	0,4757,6080,12393,13206,17124,18420,22717,27034,28222,
#Deleted in new
chr20	44408119	44408203	chr20:44408119-44408203	3	+	44408119	44408119	5263520	1	84,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	44436171	44450557	chr20:44436171-44450557	1	-	44436171	44436171	8553170	3	394,131,21,	0,13788,14365,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	44448776	44450548	chr20:44448776-44450548	0	-	44448776	44448776	789624	3	278,131,12,	0,1183,1760,
#Partially deleted in new
chr20	44448800	44465349	chr20:44448800-44465349	3	-	44448800	44448800	8553170	4	254,151,59,185,	0,3222,13423,16364,
#Partially deleted in new
chr20	44451983	44465328	chr20:44451983-44465328	0	-	44451983	44451983	789624	3	190,59,164,	0,10240,13181,
#Partially deleted in new
chr20	44461762	44465344	chr20:44461762-44465344	1	-	44461762	44461762	789624	2	520,180,	0,3402,
#Deleted in new
chr20	44466563	44466842	chr20:44466563-44466842	7	-	44466563	44466563	16724991	1	279,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	44475885	44494603	chr20:44475885-44494603	3	+	44479999	44489541	789624	5	106,460,194,111,5341,	0,4099,8451,10710,13377,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	44475887	44494603	chr20:44475887-44494603	1	+	44479999	44489541	789624	6	104,24,460,194,111,5341,	0,2736,4097,8449,10708,13375,
#Partially deleted in new
chr20	44475903	44489836	chr20:44475903-44489836	1	+	44479999	44489282	789624	3	88,477,574,	0,4064,13359,
#Partially deleted in new
chr20	44475919	44489453	chr20:44475919-44489453	0	+	44479999	44489453	789624	5	72,460,92,111,191,	0,4065,8417,10676,13343,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	44485804	44491815	chr20:44485804-44491815	0	+	44485804	44485804	8553170	2	902,2553,	0,3458,
#Partially deleted in new
chr20	44496220	44504891	chr20:44496220-44504891	0	-	44500295	44504891	789624	5	135,177,228,181,91,	0,4037,4852,7594,8580,
#Partially deleted in new
chr20	44496223	44522085	chr20:44496223-44522085	3	-	44500295	44521951	789624	11	132,177,228,181,91,170,138,80,194,162,173,	0,4034,4849,7591,8577,10603,13667,15065,16577,17655,25689,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	44497430	44522109	chr20:44497430-44522109	1	-	44500295	44521951	789624	10	3004,228,181,91,170,138,80,194,162,197,	0,3642,6384,7370,9396,12460,13858,15370,16448,24482,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	44513892	44522054	chr20:44513892-44522054	0	-	44513892	44513892	8553170	3	148,103,142,	0,5419,8020,
#Partially deleted in new
chr20	44531784	44619037	chr20:44531784-44619037	1	+	44614556	44618364	789624	6	194,147,105,70,174,753,	0,50800,53315,58012,82749,86500,
#Partially deleted in new
chr20	44531784	44619037	chr20:44531784-44619037	1	+	44614556	44618364	789624	5	194,147,70,174,753,	0,50800,58012,82749,86500,
#Partially deleted in new
chr20	44531784	44619037	chr20:44531784-44619037	3	+	44614556	44618364	789624	4	194,70,174,753,	0,58012,82749,86500,
#Partially deleted in new
chr20	44531908	44619037	chr20:44531908-44619037	1	+	44614556	44618364	789624	6	70,147,70,275,174,753,	0,50676,57888,66707,82625,86376,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	44531915	44624247	chr20:44531915-44624247	1	+	44614556	44623976	789624	5	63,147,70,174,315,	0,50669,57881,82618,92017,
#Partially deleted in new
chr20	44564200	44614768	chr20:44564200-44614768	0	+	44564200	44564200	8553170	3	140,70,235,	0,25596,50333,
#Partially deleted in new
chr20	44582548	44619037	chr20:44582548-44619037	1	+	44614556	44618364	789624	4	183,70,174,753,	0,7248,31985,35736,
#Partially deleted in new
chr20	44614307	44619037	chr20:44614307-44619037	1	+	44614556	44618364	789624	2	400,753,	0,3977,
#Partially deleted in new
chr20	44619521	44651742	chr20:44619521-44651742	3	-	44619833	44651607	0	12	326,103,130,65,102,72,128,116,144,123,62,168,	0,777,1496,3066,3307,3485,4680,6047,6934,9525,16705,32053,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	44619521	44626491	chr20:44619521-44626491	0	-	44619521	44619521	8553170	7	326,849,65,250,128,116,36,	0,777,3066,3307,4680,6047,6934,
#Partially deleted in new
chr20	44619578	44651681	chr20:44619578-44651681	0	-	44621135	44651607	789624	11	269,103,130,102,72,128,116,144,123,62,107,	0,720,1439,3250,3428,4623,5990,6877,9468,16648,31996,
#Partially deleted in new
chr20	44619809	44651691	chr20:44619809-44651691	0	-	44619809	44619809	8553170	11	38,103,130,65,250,128,116,144,123,62,117,	0,489,1208,2778,3019,4392,5759,6646,9237,16417,31765,
#Partially deleted in new
chr20	44619809	44651691	chr20:44619809-44651691	1	-	44619833	44651607	789624	11	38,103,130,65,102,128,116,144,123,62,117,	0,489,1208,2778,3019,4392,5759,6646,9237,16417,31765,
#Partially deleted in new
chr20	44619809	44651691	chr20:44619809-44651691	0	-	44623068	44651607	789624	9	38,103,130,65,102,72,123,62,117,	0,489,1208,2778,3019,3197,9237,16417,31765,
#Partially deleted in new
chr20	44626322	44651661	chr20:44626322-44651661	0	-	44626322	44626322	8553170	4	277,123,62,87,	0,2724,9904,25252,
#Partially deleted in new
chr20	44626516	44652114	chr20:44626516-44652114	0	-	44626516	44626516	8553170	4	83,123,62,213,	0,2530,9710,25385,
#Partially deleted in new
chr20	44636070	44652233	chr20:44636070-44652233	0	-	44636070	44636070	8553170	2	218,332,	0,15831,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	44656450	44663498	chr20:44656450-44663498	3	-	44656450	44656450	789624	4	601,187,68,145,	0,2544,3260,6903,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	44656450	44696096	chr20:44656450-44696096	3	-	44656450	44656450	8553170	6	601,187,68,349,117,94,	0,2544,3260,6754,38940,39552,
#Partially deleted in new
chr20	44694891	44738896	chr20:44694891-44738896	3	-	44694891	44694891	8553170	3	616,169,77,	0,21733,43928,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	44695075	44696084	chr20:44695075-44696084	0	-	44695075	44695075	8553170	2	432,82,	0,927,
#Partially deleted in new
chr20	44695201	44745995	chr20:44695201-44745995	0	-	44695201	44695201	8553170	3	306,115,31,	0,43618,50763,
#Partially deleted in new
chr20	44711861	44746021	chr20:44711861-44746021	1	-	44711861	44711861	789624	5	127,169,60,115,57,	0,4763,25649,26958,34103,
#Partially deleted in new
chr20	44714843	44727811	chr20:44714843-44727811	3	+	44715390	44727307	789624	5	318,85,217,255,725,	0,522,5053,9894,12243,
#Partially deleted in new
chr20	44714882	44727811	chr20:44714882-44727811	1	+	44715390	44727458	789624	3	568,225,725,	0,5014,12204,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	44714921	44721511	chr20:44714921-44721511	0	+	44714921	44714921	8553170	2	529,1615,	0,4975,
#Partially deleted in new
chr20	44715244	44727811	chr20:44715244-44727811	1	+	44715390	44727307	789624	4	206,217,255,725,	0,4652,9493,11842,
#Partially deleted in new
chr20	44719986	44727481	chr20:44719986-44727481	0	+	44719986	44719986	8553170	3	135,255,395,	0,4751,7100,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	44723656	44728509	chr20:44723656-44728509	0	+	44723656	44723656	8553170	2	1336,1423,	0,3430,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	44745779	44752313	chr20:44745779-44752313	3	+	44745910	44750838	789624	2	414,2185,	0,4349,
#Deleted in new
chr20	44746641	44747201	chr20:44746641-44747201	3	+	44746641	44746641	8553170	1	560,	0,
#Partially deleted in new
chr20	44751807	44810338	chr20:44751807-44810338	3	-	44756133	44810271	789624	6	4545,140,102,113,139,164,	0,5090,5862,6264,19467,58367,
#Partially deleted in new
chr20	44755910	44810271	chr20:44755910-44810271	1	-	44756133	44810271	789624	6	442,140,102,113,142,97,	0,987,1759,2161,15364,54264,
#Partially deleted in new
chr20	44841924	44842539	chr20:44841924-44842539	7	-	44841924	44841924	16724991	1	615,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	44885675	44908532	chr20:44885675-44908532	3	+	44901533	44906438	0	6	211,303,124,164,96,2151,	0,15855,18317,19292,20325,20706,
#Partially deleted in new
chr20	44885701	44906520	chr20:44885701-44906520	0	+	44901533	44904056	789624	7	185,303,86,124,164,96,139,	0,15829,17334,18291,19266,20299,20680,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	44885710	44908532	chr20:44885710-44908532	1	+	44901533	44906438	0	7	176,95,303,124,164,96,2151,	0,1937,15820,18282,19257,20290,20671,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	44885713	44906504	chr20:44885713-44906504	0	+	44885713	44885713	8553170	4	2029,2586,1129,123,	0,15817,19254,20668,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	44885739	44901833	chr20:44885739-44901833	0	+	44901533	44901833	789624	3	147,198,303,	0,1805,15791,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	44885751	44901756	chr20:44885751-44901756	0	+	44901533	44901756	789624	4	135,100,95,226,	0,1127,1896,15779,
#Partially deleted in new
chr20	44901610	44905085	chr20:44901610-44905085	0	+	44901610	44902918	789624	4	223,224,124,118,	0,1287,2382,3357,
#Deleted in new
chr20	44903818	44905079	chr20:44903818-44905079	0	+	44903818	44903818	8553170	2	298,112,	0,1149,
#Partially deleted in new
chr20	44910061	44930726	chr20:44910061-44930726	1	+	44910143	44930538	789624	8	275,194,116,140,95,138,96,209,	0,2598,6694,8844,9121,11532,14099,20456,
#Partially deleted in new
chr20	44910061	44939321	chr20:44910061-44939321	3	+	44910143	44938742	789624	15	275,194,116,140,95,138,96,267,91,114,107,94,131,75,196,	0,2598,6694,8844,9121,11532,14099,20398,22280,23010,25329,26575,27999,28612,29064,
#Partially deleted in new
chr20	44910123	44939313	chr20:44910123-44939313	1	+	44910143	44930538	789624	14	213,194,116,140,95,138,96,209,114,107,94,131,75,188,	0,2536,6632,8782,9059,11470,14037,20394,22948,25267,26513,27937,28550,29002,
#Partially deleted in new
chr20	44910143	44938748	chr20:44910143-44938748	1	+	44910143	44938742	789624	14	193,194,116,140,95,138,96,267,91,114,107,94,131,75,	0,2516,6612,8762,9039,11450,14017,20316,22198,22928,25247,26493,27917,28530,
#Partially deleted in new
chr20	44918993	44930726	chr20:44918993-44930726	0	+	44918993	44918993	8553170	5	52,20,111,96,209,	0,189,2627,5167,11524,
#Partially deleted in new
chr20	44921610	44959035	chr20:44921610-44959035	0	+	44921610	44921610	8553170	6	121,96,267,107,94,699,	0,2550,8849,13780,15026,36726,
#Partially deleted in new
chr20	44921624	44939317	chr20:44921624-44939317	0	+	44921624	44921624	8553170	9	107,96,267,129,107,94,147,75,192,	0,2536,8835,11432,13766,15012,16420,17049,17501,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	44931561	44939317	chr20:44931561-44939317	1	+	44933079	44938742	789624	6	1624,107,94,131,75,192,	0,3829,5075,6499,7112,7564,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	44932178	44959035	chr20:44932178-44959035	1	+	44933079	44952654	789624	6	1007,107,94,131,62,699,	0,3212,4458,5882,20464,26158,
#Partially deleted in new
chr20	44932681	44939317	chr20:44932681-44939317	1	+	44933079	44939203	789624	6	32,114,107,94,131,192,	0,390,2709,3955,5379,6444,
#Partially deleted in new
chr20	44932689	44939317	chr20:44932689-44939317	0	+	44933079	44938677	789624	7	496,107,94,83,131,75,192,	0,2701,3947,4204,5371,5984,6436,
#Partially deleted in new
chr20	44933042	44937187	chr20:44933042-44937187	0	+	44933042	44933042	8553170	3	143,107,551,	0,2348,3594,
#Partially deleted in new
chr20	44933134	44958807	chr20:44933134-44958807	0	+	44933134	44958411	789624	5	51,107,94,131,471,	0,2256,3502,4926,25202,
#Partially deleted in new
chr20	44935396	44938696	chr20:44935396-44938696	0	+	44935396	44935396	8553170	4	101,94,90,23,	0,1240,2705,3277,
#Partially deleted in new
chr20	44935430	44939184	chr20:44935430-44939184	0	+	44935430	44935430	8553170	5	67,94,147,75,59,	0,1206,2614,3243,3695,
#Partially deleted in new
chr20	44935461	44939317	chr20:44935461-44939317	0	+	44935461	44939186	789624	5	36,94,83,131,192,	0,1175,1432,2599,3664,
#Deleted in new
chr20	44937842	44939317	chr20:44937842-44939317	0	+	44937842	44937842	8553170	2	349,192,	0,1283,
#Partially deleted in new
chr20	44942129	44960486	chr20:44942129-44960486	3	-	44943108	44960333	789624	7	1084,127,148,170,153,100,280,	0,1323,6600,9703,12938,14256,18077,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	44963793	44966402	chr20:44963793-44966402	3	-	44963793	44963793	789624	3	1655,124,286,	0,1768,2323,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	44963799	44965617	chr20:44963799-44965617	0	-	44963799	44963799	8553170	3	451,46,56,	0,1603,1762,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	44966473	45079959	chr20:44966473-45079959	3	+	44966568	45075176	0	11	130,81,129,115,165,168,138,129,187,158,4942,	0,5604,11969,15355,20658,28616,30695,33918,34693,58499,108544,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	44966478	45079948	chr20:44966478-45079948	1	+	44966568	45075176	789624	10	125,81,129,115,168,138,129,187,158,4931,	0,5599,11964,15350,28611,30690,33913,34688,58494,108539,
#Partially deleted in new
chr20	44966514	44972920	chr20:44966514-44972920	0	+	44966514	44966514	8553170	2	89,843,	0,5563,
#Partially deleted in new
chr20	44966521	45075608	chr20:44966521-45075608	1	+	44966568	45053169	0	12	82,81,129,115,165,168,138,129,187,158,95,591,	0,5556,11921,15307,20610,28568,30647,33870,34645,58451,86564,108496,
#Partially deleted in new
chr20	44966538	44974404	chr20:44966538-44974404	0	+	44966538	44966538	8553170	4	65,81,227,176,	0,5539,6668,7690,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	44966552	44975684	chr20:44966552-44975684	0	+	44966568	44973379	789624	4	51,81,133,1585,	0,5525,6748,7547,
#Partially deleted in new
chr20	44970541	44995257	chr20:44970541-44995257	0	+	44978554	44995257	789624	6	64,81,129,115,165,168,	0,1536,7901,11287,16590,24548,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	45004347	45004454	chr20:45004347-45004454	3	+	45004347	45004347	8553170	1	107,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	45092309	45101112	chr20:45092309-45101112	3	-	45094869	45099236	789624	5	3031,1034,79,202,192,	0,5352,6851,7850,8611,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	45094364	45100967	chr20:45094364-45100967	1	-	45094869	45099236	789624	4	976,1034,79,47,	0,3297,4796,6556,
#Partially deleted in new
chr20	45109451	45115162	chr20:45109451-45115162	1	-	45109731	45115083	789624	4	562,167,141,164,	0,922,1183,5547,
#Partially deleted in new
chr20	45109451	45115172	chr20:45109451-45115172	3	-	45110008	45115083	789624	4	562,141,141,174,	0,948,1183,5547,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	45123424	45124465	chr20:45123424-45124465	3	-	45123845	45124447	789624	3	519,159,97,	0,682,944,
#Deleted in new
chr20	45137705	45138976	chr20:45137705-45138976	7	-	45137705	45137705	16724991	3	192,158,164,	0,811,1107,
#Deleted in new
chr20	45138517	45138897	chr20:45138517-45138897	5	-	45138517	45138517	16724991	2	157,85,	0,295,
#Deleted in new
chr20	45174875	45176544	chr20:45174875-45176544	3	+	45174922	45176135	0	3	126,276,175,	0,985,1494,
#Deleted in new
chr20	45206996	45209772	chr20:45206996-45209772	3	+	45207053	45208686	789624	3	133,1357,172,	0,377,2604,
#Deleted in new
chr20	45221299	45224458	chr20:45221299-45224458	3	+	45221389	45223381	789624	3	166,1717,168,	0,409,2991,
#Deleted in new
chr20	45229816	45230191	chr20:45229816-45230191	7	+	45229816	45229816	16724991	2	87,135,	0,240,
#Partially deleted in new
chr20	45230941	45231432	chr20:45230941-45231432	5	+	45230941	45230941	16724991	2	85,157,	0,334,
#Deleted in new
chr20	45252238	45254564	chr20:45252238-45254564	3	-	45252414	45254543	0	4	181,150,159,106,	0,763,1336,2220,
#Partially deleted in new
chr20	45293444	45305591	chr20:45293444-45305591	3	-	45293766	45305582	789624	10	381,108,153,414,123,123,123,123,570,82,	0,463,4473,4725,7442,7657,7876,9944,10783,12065,
#Partially deleted in new
chr20	45293444	45305591	chr20:45293444-45305591	1	-	45293766	45305582	789624	9	381,108,153,414,123,123,123,570,82,	0,463,4473,4725,7442,7657,7876,10783,12065,
#Partially deleted in new
chr20	45293449	45308327	chr20:45293449-45308327	1	-	45293766	45305582	789624	9	376,108,153,414,123,123,570,107,153,	0,458,4468,4720,7437,7652,10778,12060,14725,
#Partially deleted in new
chr20	45293766	45308297	chr20:45293766-45308297	1	-	45293766	45305582	789624	8	60,107,153,414,123,570,107,123,	0,142,4151,4403,7120,10461,11743,14408,
#Partially deleted in new
chr20	45293766	45308529	chr20:45293766-45308529	1	-	45293766	45305582	789624	11	60,107,153,414,123,123,123,570,107,123,88,	0,142,4151,4403,7120,7335,7554,10461,11743,14408,14675,
#Partially deleted in new
chr20	45306850	45317822	chr20:45306850-45317822	3	+	45306922	45316959	789624	12	94,109,126,71,116,175,138,110,153,156,104,1137,	0,1292,2716,4738,4988,5370,6617,7184,7562,9336,9626,9835,
#Partially deleted in new
chr20	45306850	45316959	chr20:45306850-45316959	1	+	45306922	45316811	789624	12	94,109,126,71,116,175,138,110,153,156,114,274,	0,1292,2716,4738,4988,5370,6617,7184,7562,9336,9626,9835,
#Partially deleted in new
chr20	45306850	45316959	chr20:45306850-45316959	1	+	45306922	45316959	789624	12	94,109,126,71,116,175,138,110,153,156,104,271,	0,1292,2716,4738,4988,5370,6617,7184,7562,9336,9626,9838,
#Partially deleted in new
chr20	45314034	45316959	chr20:45314034-45316959	0	+	45314034	45316811	789624	5	110,153,61,104,274,	0,378,2247,2442,2651,
#Deleted in new
chr20	45315924	45317824	chr20:45315924-45317824	0	+	45315924	45315924	8553170	3	418,104,1139,	0,552,761,
#Partially deleted in new
chr20	45325287	45348424	chr20:45325287-45348424	3	-	45327263	45348384	0	5	2128,199,47,139,100,	0,5078,7735,10494,23037,
#Deleted in new
chr20	45345114	45345823	chr20:45345114-45345823	3	-	45345114	45345114	8553170	1	709,	0,
#Partially deleted in new
chr20	45361936	45367214	chr20:45361936-45367214	1	+	45363531	45367115	789624	5	93,147,165,68,340,	0,1232,1592,3682,4938,
#Partially deleted in new
chr20	45361950	45367225	chr20:45361950-45367225	1	+	45363594	45367115	789624	5	79,147,150,68,351,	0,1218,1593,3668,4924,
#Partially deleted in new
chr20	45363027	45369215	chr20:45363027-45369215	3	+	45363531	45367115	789624	4	288,165,68,2341,	0,501,2591,3847,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	45363138	45376798	chr20:45363138-45376798	1	+	45363531	45374294	789624	4	177,165,68,2505,	0,390,2480,11155,
#Partially deleted in new
chr20	45363154	45365868	chr20:45363154-45365868	0	+	45363154	45363154	8553170	3	161,165,250,	0,374,2464,
#Partially deleted in new
chr20	45363199	45410610	chr20:45363199-45410610	0	+	45363531	45408466	789624	6	116,165,68,147,138,679,	0,329,2419,45260,45601,46732,
#Partially deleted in new
chr20	45363215	45410007	chr20:45363215-45410007	0	+	45363215	45363215	8553170	5	100,68,147,138,76,	0,2403,45244,45585,46716,
#Partially deleted in new
chr20	45363229	45367424	chr20:45363229-45367424	0	+	45363531	45365558	789624	4	86,165,140,550,	0,299,2317,3645,
#Partially deleted in new
chr20	45363453	45366999	chr20:45363453-45366999	0	+	45363531	45366999	789624	3	240,68,125,	0,2165,3421,
#Partially deleted in new
chr20	45363509	45410068	chr20:45363509-45410068	1	+	45363531	45408466	789624	5	184,68,147,138,137,	0,2109,44950,45291,46422,
#Partially deleted in new
chr20	45365218	45367428	chr20:45365218-45367428	0	+	45365218	45365218	8553170	2	468,554,	0,1656,
#Partially deleted in new
chr20	45372562	45378393	chr20:45372562-45378393	3	-	45373906	45378236	789624	5	1449,514,131,75,205,	0,2476,4649,4976,5626,
#Partially deleted in new
chr20	45375476	45407889	chr20:45375476-45407889	0	-	45375476	45375476	8553170	6	76,131,75,55,104,141,	0,1735,2062,28776,30240,32272,
#Partially deleted in new
chr20	45377196	45405994	chr20:45377196-45405994	0	-	45377196	45377196	8553170	4	146,75,55,278,	0,342,27056,28520,
#Deleted in new
chr20	45388346	45388705	chr20:45388346-45388705	7	-	45388346	45388346	16724991	1	359,	0,
#Partially deleted in new
chr20	45404075	45407877	chr20:45404075-45407877	0	-	45404075	45404075	8553170	3	232,104,129,	0,1641,3673,
#Partially deleted in new
chr20	45406056	45410610	chr20:45406056-45410610	3	+	45408467	45410140	789624	4	154,147,138,679,	0,2403,2744,3875,
#Partially deleted in new
chr20	45406070	45410610	chr20:45406070-45410610	1	+	45408467	45409000	789624	4	140,147,236,679,	0,2389,2730,3861,
#Partially deleted in new
chr20	45406183	45410610	chr20:45406183-45410610	1	+	45408467	45410140	789624	4	72,147,138,679,	0,2276,2617,3748,
#Partially deleted in new
chr20	45406220	45410610	chr20:45406220-45410610	1	+	45406451	45410140	789624	4	390,274,138,679,	0,2112,2580,3711,
#Partially deleted in new
chr20	45406587	45410610	chr20:45406587-45410610	1	+	45408467	45409000	789624	4	145,147,236,679,	0,1872,2213,3344,
#Partially deleted in new
chr20	45406618	45410610	chr20:45406618-45410610	1	+	45408467	45410140	789624	4	114,147,138,679,	0,1841,2182,3313,
#Partially deleted in new
chr20	45407206	45410610	chr20:45407206-45410610	1	+	45408467	45410140	789624	4	573,147,138,679,	0,1253,1594,2725,
#Partially deleted in new
chr20	45408006	45410610	chr20:45408006-45410610	1	+	45408161	45410140	789624	3	600,138,679,	0,794,1925,
#Partially deleted in new
chr20	45408288	45410610	chr20:45408288-45410610	0	+	45408288	45409000	789624	3	318,236,679,	0,512,1643,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	45416066	45426244	chr20:45416066-45426244	3	+	45416156	45425826	789624	12	277,178,128,101,87,88,98,166,201,166,84,671,	0,450,2785,3228,3437,4069,4265,4461,5316,8149,8429,9507,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	45416083	45426202	chr20:45416083-45426202	1	+	45416156	45425826	789624	10	260,101,87,88,98,166,201,166,84,629,	0,3211,3420,4052,4248,4444,5299,8132,8412,9490,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	45416096	45426189	chr20:45416096-45426189	0	+	45416156	45419301	789624	11	247,178,101,87,88,98,166,201,166,84,616,	0,420,3198,3407,4039,4235,4431,5286,8119,8399,9477,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	45416106	45426244	chr20:45416106-45426244	1	+	45416156	45425826	789624	11	237,138,101,87,88,98,166,201,166,84,671,	0,410,3188,3397,4029,4225,4421,5276,8109,8389,9467,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	45416121	45426241	chr20:45416121-45426241	0	+	45416156	45419608	789624	12	222,178,128,101,135,88,98,166,201,166,84,668,	0,395,2730,3173,3382,4014,4210,4406,5261,8094,8374,9452,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	45416122	45430149	chr20:45416122-45430149	0	+	45416156	45427437	789624	13	221,178,128,101,87,88,98,166,201,166,84,124,669,	0,394,2729,3172,3381,4013,4209,4405,5260,8093,8373,11299,13358,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	45416122	45426196	chr20:45416122-45426196	0	+	45416156	45424321	789624	12	221,178,128,101,87,88,98,166,151,166,84,623,	0,394,2729,3172,3381,4013,4209,4405,5260,8093,8373,9451,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	45416122	45426202	chr20:45416122-45426202	0	+	45416156	45420152	789624	11	221,128,101,83,88,98,166,201,166,84,629,	0,2729,3172,3385,4013,4209,4405,5260,8093,8373,9451,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	45416122	45426206	chr20:45416122-45426206	0	+	45416122	45416122	8553170	11	221,178,128,101,87,88,98,1056,166,84,633,	0,394,2729,3172,3381,4013,4209,4405,8093,8373,9451,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	45416126	45426196	chr20:45416126-45426196	0	+	45416126	45416126	8553170	11	217,2463,101,87,88,98,186,201,166,84,623,	0,390,3168,3377,4009,4205,4381,5256,8089,8369,9447,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	45416131	45426133	chr20:45416131-45426133	0	+	45416156	45418797	789624	12	212,138,208,101,87,88,98,166,201,166,84,560,	0,385,2640,3163,3372,4004,4200,4396,5251,8084,8364,9442,
#Partially deleted in new
chr20	45416132	45456926	chr20:45416132-45456926	0	+	45416156	45427437	789624	16	211,178,128,101,87,88,98,166,201,166,84,124,190,182,180,318,	0,384,2719,3162,3371,4003,4199,4395,5250,8083,8363,11289,13348,31502,35865,40476,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	45416132	45426184	chr20:45416132-45426184	0	+	45416156	45418829	789624	12	211,178,208,101,87,88,98,186,201,166,84,611,	0,384,2639,3162,3371,4003,4199,4375,5250,8083,8363,9441,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	45416136	45426241	chr20:45416136-45426241	1	+	45416156	45425826	789624	11	207,178,128,101,87,88,98,166,166,84,668,	0,380,2715,3158,3367,3999,4195,4391,8079,8359,9437,
#Partially deleted in new
chr20	45416140	45425977	chr20:45416140-45425977	0	+	45416156	45419301	789624	11	203,178,101,118,88,98,166,201,166,84,404,	0,376,3154,3332,3995,4191,4387,5242,8075,8355,9433,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	45416140	45426203	chr20:45416140-45426203	0	+	45416156	45420616	789624	12	203,178,128,101,87,88,118,186,201,166,84,630,	0,376,2711,3154,3363,3995,4171,4367,5242,8075,8355,9433,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	45416140	45426201	chr20:45416140-45426201	0	+	45416156	45419525	789624	12	203,138,128,101,87,88,98,166,201,166,84,628,	0,376,2711,3154,3363,3995,4191,4387,5242,8075,8355,9433,
#Partially deleted in new
chr20	45416140	45448578	chr20:45416140-45448578	1	+	45416156	45448277	789624	12	203,178,128,101,87,88,98,166,201,166,84,335,	0,376,2711,3154,3363,3995,4191,4387,5242,8075,8355,32103,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	45416140	45426195	chr20:45416140-45426195	0	+	45416156	45419525	789624	11	203,128,101,87,88,98,166,201,166,84,622,	0,2711,3154,3363,3995,4191,4387,5242,8075,8355,9433,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr20	45416140	45456907	chr20:45416140-45456907	0	+	45416156	45419525	789624	15	203,128,101,87,88,98,166,201,166,84,124,226,182,3934,299,	0,2711,3154,3363,3995,4191,4387,5242,8075,8355,11281,13304,31494,32103,40468,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	45416140	45426179	chr20:45416140-45426179	0	+	45416156	45418829	789624	11	203,178,208,101,87,88,98,166,166,84,606,	0,376,2631,3154,3363,3995,4191,4387,8075,8355,9433,
#Partially deleted in new
chr20	45416140	45425100	chr20:45416140-45425100	1	+	45416156	45424583	789624	11	203,178,128,101,87,88,98,166,201,166,605,	0,376,2711,3154,3363,3995,4191,4387,5242,8075,8355,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	45416140	45426200	chr20:45416140-45426200	0	+	45416156	45420152	789624	12	203,178,128,101,118,88,98,166,201,166,84,627,	0,376,2711,3154,3332,3995,4191,4387,5242,8075,8355,9433,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	45416140	45426195	chr20:45416140-45426195	0	+	45416156	45420194	789624	12	203,178,128,101,87,71,98,166,201,166,84,622,	0,376,2711,3154,3363,4012,4191,4387,5242,8075,8355,9433,
#Partially deleted in new
chr20	45416140	45425909	chr20:45416140-45425909	0	+	45416156	45420152	789624	9	203,87,88,98,166,201,166,84,336,	0,3363,3995,4191,4387,5242,8075,8355,9433,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	45416140	45426189	chr20:45416140-45426189	0	+	45416156	45419525	789624	12	203,178,128,101,83,88,98,166,201,166,84,616,	0,376,2711,3154,3367,3995,4191,4387,5242,8075,8355,9433,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	45416140	45426196	chr20:45416140-45426196	0	+	45416156	45418829	789624	12	203,178,208,101,87,88,98,166,201,166,84,623,	0,376,2631,3154,3363,3995,4191,4387,5242,8075,8355,9433,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	45416140	45426202	chr20:45416140-45426202	0	+	45416156	45420543	789624	11	203,178,128,101,87,88,98,186,166,84,629,	0,376,2711,3154,3363,3995,4191,4367,8075,8355,9433,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	45416140	45426240	chr20:45416140-45426240	0	+	45416156	45420543	789624	12	203,178,128,101,87,88,98,186,201,166,84,667,	0,376,2711,3154,3363,3995,4191,4367,5242,8075,8355,9433,
#Partially deleted in new
chr20	45416141	45421583	chr20:45416141-45421583	0	+	45416156	45421583	789624	7	202,128,87,88,98,166,201,	0,2710,3362,3994,4190,4386,5241,
#Partially deleted in new
chr20	45416141	45420632	chr20:45416141-45420632	0	+	45416156	45420632	789624	8	202,148,128,101,87,88,98,105,	0,375,2710,3153,3362,3994,4190,4386,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	45416141	45426189	chr20:45416141-45426189	0	+	45416156	45419525	789624	10	202,178,87,88,98,166,201,166,84,616,	0,375,3362,3994,4190,4386,5241,8074,8354,9432,
#Partially deleted in new
chr20	45416142	45420424	chr20:45416142-45420424	0	+	45416156	45418829	789624	7	201,178,208,101,83,88,93,	0,374,2629,3152,3365,3993,4189,
#Partially deleted in new
chr20	45416142	45425867	chr20:45416142-45425867	0	+	45416156	45420152	789624	11	201,178,128,87,88,98,166,201,166,84,294,	0,374,2709,3361,3993,4189,4385,5240,8073,8353,9431,
#Partially deleted in new
chr20	45416142	45448581	chr20:45416142-45448581	0	+	45416156	45427437	789624	14	201,178,128,101,87,88,98,166,166,84,124,190,220,338,	0,374,2709,3152,3361,3993,4189,4385,8073,8353,11279,13338,31454,32101,
#Partially deleted in new
chr20	45416143	45424302	chr20:45416143-45424302	0	+	45416156	45424302	789624	9	200,138,128,87,88,98,166,201,87,	0,373,2708,3360,3992,4188,4384,5239,8072,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	45416143	45426202	chr20:45416143-45426202	1	+	45416156	45425826	789624	9	200,83,88,98,166,201,166,84,629,	0,3364,3992,4188,4384,5239,8072,8352,9430,
#Partially deleted in new
chr20	45416144	45421518	chr20:45416144-45421518	0	+	45416156	45421518	789624	8	199,178,128,83,88,98,166,136,	0,372,2707,3363,3991,4187,4383,5238,
#Partially deleted in new
chr20	45416144	45421409	chr20:45416144-45421409	0	+	45416156	45421409	789624	8	199,178,118,87,88,98,166,27,	0,372,3133,3359,3991,4187,4383,5238,
#Partially deleted in new
chr20	45416149	45421493	chr20:45416149-45421493	0	+	45416156	45419525	789624	7	194,101,83,88,98,186,111,	0,3145,3358,3986,4182,4358,5233,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	45416150	45426202	chr20:45416150-45426202	0	+	45416156	45419301	789624	10	193,178,101,87,88,98,186,166,84,629,	0,366,3144,3353,3985,4181,4357,8065,8345,9423,
#Partially deleted in new
chr20	45416151	45424315	chr20:45416151-45424315	0	+	45416156	45424315	789624	7	192,101,87,88,98,166,100,	0,3143,3352,3984,4180,4376,8064,
#Partially deleted in new
chr20	45416153	45425826	chr20:45416153-45425826	1	+	45416156	45425826	789624	7	190,98,166,201,166,84,253,	0,4178,4374,5229,8062,8342,9420,
#Partially deleted in new
chr20	45416153	45424262	chr20:45416153-45424262	0	+	45416156	45420616	789624	6	190,178,98,166,201,47,	0,363,4178,4374,5229,8062,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	45416174	45426181	chr20:45416174-45426181	0	+	45416174	45425826	789624	11	169,178,253,87,88,98,166,201,166,84,608,	0,342,2968,3329,3961,4157,4353,5208,8041,8321,9399,
#Partially deleted in new
chr20	45416312	45420151	chr20:45416312-45420151	0	+	45416312	45418797	789624	5	31,208,101,83,16,	0,2459,2982,3195,3823,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	45416474	45426240	chr20:45416474-45426240	0	+	45416474	45416474	8553170	10	220,101,87,88,98,166,201,166,84,667,	0,2820,3029,3661,3857,4053,4908,7741,8021,9099,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	45416518	45426210	chr20:45416518-45426210	0	+	45416518	45418829	789624	10	176,624,87,88,98,166,201,166,84,637,	0,2253,2985,3617,3813,4009,4864,7697,7977,9055,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	45416550	45426167	chr20:45416550-45426167	0	+	45416550	45425826	789624	11	144,128,101,87,88,98,166,282,166,84,594,	0,2301,2744,2953,3585,3781,3977,4832,7665,7945,9023,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	45416664	45430073	chr20:45416664-45430073	0	+	45416664	45419301	789624	11	30,101,87,88,98,166,201,166,84,124,593,	0,2630,2839,3471,3667,3863,4718,7551,7831,10757,12816,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	45418240	45426202	chr20:45418240-45426202	0	+	45418240	45418240	8553170	8	1155,87,88,98,1056,166,84,629,	0,1263,1895,2091,2287,5975,6255,7333,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	45418381	45426202	chr20:45418381-45426202	0	+	45418381	45418381	8553170	11	154,128,101,87,88,98,166,201,166,84,629,	0,470,913,1122,1754,1950,2146,3001,5834,6114,7192,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	45418526	45426219	chr20:45418526-45426219	0	+	45418526	45418526	8553170	10	453,101,87,88,98,166,201,166,84,646,	0,768,977,1609,1805,2001,2856,5689,5969,7047,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	45418534	45426191	chr20:45418534-45426191	0	+	45418534	45418534	8553170	11	27,128,101,87,88,98,166,201,166,84,618,	0,317,760,969,1601,1797,1993,2848,5681,5961,7039,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	45419311	45431284	chr20:45419311-45431284	0	+	45419311	45427437	789624	11	84,87,88,98,166,201,166,84,124,226,113,	0,192,824,1020,1216,2071,4904,5184,8110,10133,11860,
#Partially deleted in new
chr20	45419905	45426018	chr20:45419905-45426018	0	+	45419905	45419905	8553170	7	318,98,186,201,166,84,445,	0,426,602,1477,4310,4590,5668,
#Partially deleted in new
chr20	45419941	45420683	chr20:45419941-45420683	0	+	45419941	45419941	8553170	3	282,98,156,	0,390,586,
#Partially deleted in new
chr20	45420420	45448578	chr20:45420420-45448578	0	+	45420420	45427437	789624	9	9,166,201,166,84,124,190,182,335,	0,107,962,3795,4075,7001,9060,27214,27823,
#Partially deleted in new
chr20	45420600	45421794	chr20:45420600-45421794	0	+	45420600	45421675	789624	2	93,412,	0,782,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	45421353	45423517	chr20:45421353-45423517	0	+	45421353	45421353	8553170	1	2164,	0,
#Partially deleted in new
chr20	45421415	45452108	chr20:45421415-45452108	0	+	45421415	45427437	789624	6	168,166,84,124,226,111,	0,2800,3080,6006,8029,30582,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	45423103	45426217	chr20:45423103-45426217	0	+	45423103	45423103	8553170	3	1278,84,644,	0,1392,2470,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	45423767	45426179	chr20:45423767-45426179	0	+	45423767	45423767	8553170	2	812,606,	0,1806,
#Deleted in new
chr20	45423813	45425123	chr20:45423813-45425123	0	+	45423813	45423813	8553170	2	568,628,	0,682,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	45424224	45426239	chr20:45424224-45426239	0	+	45424224	45425826	789624	2	157,666,	0,1349,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	45424245	45448581	chr20:45424245-45448581	0	+	45424245	45427437	789624	6	136,84,124,190,1174,338,	0,250,3176,5235,22397,23998,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	45424269	45426189	chr20:45424269-45426189	0	+	45424269	45424533	789624	3	112,119,616,	0,191,1304,
#Deleted in new
chr20	45425509	45425573	chr20:45425509-45425573	3	+	45425509	45425509	5263520	1	64,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	45425915	45430044	chr20:45425915-45430044	0	+	45425915	45425915	8553170	2	1630,564,	0,3565,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	45427426	45431335	chr20:45427426-45431335	0	+	45427426	45427437	8553170	3	119,190,164,	0,2054,3745,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	45435271	45448325	chr20:45435271-45448325	3	-	45435271	45435271	8553170	2	700,1094,	0,11960,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	45441910	45448561	chr20:45441910-45448561	0	+	45441910	45441910	8553170	2	1340,1107,	0,5544,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	45445430	45448580	chr20:45445430-45448580	0	+	45445430	45445430	8553170	1	3150,	0,
#Partially deleted in new
chr20	45451934	45456934	chr20:45451934-45456934	0	+	45451934	45451934	8553170	2	243,326,	0,4674,
#Partially deleted in new
chr20	45469705	45481532	chr20:45469705-45481532	3	+	45469781	45480093	789624	4	155,144,153,162,	0,683,10236,11665,
#Partially deleted in new
chr20	45469755	45479748	chr20:45469755-45479748	1	+	45469781	45479727	789624	3	105,144,107,	0,633,9886,
#Partially deleted in new
chr20	45469755	45481532	chr20:45469755-45481532	1	+	45469781	45480093	789624	3	105,153,162,	0,10186,11615,
#Partially deleted in new
chr20	45469755	45481531	chr20:45469755-45481531	0	+	45469781	45471169	789624	5	105,144,129,153,161,	0,633,1397,10186,11615,
#Partially deleted in new
chr20	45471272	45481532	chr20:45471272-45481532	0	+	45471272	45471272	8553170	3	145,153,162,	0,8669,10098,
#Partially deleted in new
chr20	45479438	45481532	chr20:45479438-45481532	1	+	45479871	45480093	789624	2	656,162,	0,1932,
#Partially deleted in new
chr20	45479438	45481532	chr20:45479438-45481532	0	+	45479438	45479438	8553170	3	331,153,162,	0,503,1932,
#Partially deleted in new
chr20	45487612	45490248	chr20:45487612-45490248	3	+	45487612	45487612	8553170	2	98,257,	0,2379,
#Deleted in new
chr20	45490817	45491671	chr20:45490817-45491671	7	-	45490817	45490817	16724991	1	854,	0,
#Deleted in new
chr20	45512460	45515624	chr20:45512460-45515624	3	-	45512650	45515608	789624	2	384,92,	0,3072,
#Partially deleted in new
chr20	45534195	45539495	chr20:45534195-45539495	3	-	45534466	45539407	789624	3	310,131,179,	0,3768,5121,
#Partially deleted in new
chr20	45535157	45539407	chr20:45535157-45539407	0	-	45535157	45539407	789624	3	172,131,91,	0,2806,4159,
#Deleted in new
chr20	45536795	45537014	chr20:45536795-45537014	7	-	45536795	45536795	16724991	1	219,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	45536985	45547426	chr20:45536985-45547426	3	-	45537532	45547357	789624	5	565,131,168,132,160,	0,978,5714,8653,10281,
#Deleted in new
chr20	45539982	45540227	chr20:45539982-45540227	7	-	45539982	45539982	16724991	1	245,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	45540625	45547424	chr20:45540625-45547424	3	-	45542143	45547357	789624	4	1529,168,132,158,	0,2074,5013,6641,
#Partially deleted in new
chr20	45541832	45547752	chr20:45541832-45547752	1	-	45542746	45547357	789624	4	322,58,132,486,	0,867,3806,5434,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	45541844	45546377	chr20:45541844-45546377	1	-	45542143	45545813	789624	3	310,168,739,	0,855,3794,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	45541844	45547357	chr20:45541844-45547357	0	-	45541844	45541844	8553170	2	3926,91,	0,5422,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	45551152	45579326	chr20:45551152-45579326	3	-	45552025	45579247	789624	7	460,143,141,168,141,110,105,	0,870,1983,4548,7699,10957,28069,
#Partially deleted in new
chr20	45551761	45579326	chr20:45551761-45579326	1	-	45552025	45579247	789624	6	404,141,168,141,110,105,	0,1374,3939,7090,10348,27460,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	45559757	45559876	chr20:45559757-45559876	7	-	45559757	45559757	16724991	1	119,	0,
#Deleted in new
chr20	45567989	45568807	chr20:45567989-45568807	7	-	45567989	45567989	16724991	1	818,	0,
#Partially deleted in new
chr20	45607938	45631268	chr20:45607938-45631268	3	-	45608109	45610181	789624	5	202,148,149,94,66,	0,724,2152,6689,23264,
#Deleted in new
chr20	45629525	45631196	chr20:45629525-45631196	3	+	45629813	45631018	789624	2	379,327,	0,1344,
#Partially deleted in new
chr20	45640485	45641370	chr20:45640485-45641370	7	-	45640485	45640485	16724991	1	885,	0,
#Partially deleted in new
chr20	45648562	45667177	chr20:45648562-45667177	1	-	45648718	45650600	789624	4	177,143,151,90,	0,694,1938,18525,
#Partially deleted in new
chr20	45684652	45705019	chr20:45684652-45705019	1	-	45684829	45685992	789624	4	308,155,65,102,	0,1249,19844,20265,
#Partially deleted in new
chr20	45684652	45705019	chr20:45684652-45705019	3	-	45684829	45704991	789624	3	308,65,102,	0,19844,20265,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	45702015	45708817	chr20:45702015-45708817	3	+	45702123	45705905	789624	4	196,151,65,960,	0,2428,3847,5842,
#Deleted in new
chr20	45705101	45705180	chr20:45705101-45705180	3	-	45705101	45705101	5263520	1	79,	0,
#Partially deleted in new
chr20	45722350	45725830	chr20:45722350-45725830	3	+	45722367	45725635	789624	3	132,178,202,	0,1529,3278,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	45745736	45746287	chr20:45745736-45746287	7	-	45745736	45745736	16724991	1	551,	0,
#Partially deleted in new
chr20	45747943	45791932	chr20:45747943-45791932	0	-	45747943	45747943	8553170	6	471,40,45,186,147,101,	0,10448,26456,27473,39892,43888,
#Partially deleted in new
chr20	45749919	45750074	chr20:45749919-45750074	7	+	45749919	45749919	16724991	1	155,	0,
#Partially deleted in new
chr20	45774207	45791908	chr20:45774207-45791908	3	-	45774427	45789975	789624	7	237,186,135,147,129,89,77,	0,1209,2867,13628,14723,15686,17624,
#Partially deleted in new
chr20	45774207	45790940	chr20:45774207-45790940	0	-	45774427	45790940	789624	7	237,186,135,147,129,52,11,	0,1209,2867,13628,14723,15686,16722,
#Partially deleted in new
chr20	45774212	45790072	chr20:45774212-45790072	1	-	45774427	45789975	789624	3	232,186,179,	0,1204,15681,
#Partially deleted in new
chr20	45774212	45790050	chr20:45774212-45790050	1	-	45774427	45789975	789624	4	232,186,129,157,	0,1204,14718,15681,
#Partially deleted in new
chr20	45774212	45791881	chr20:45774212-45791881	0	-	45774212	45774212	8553170	3	232,186,50,	0,1204,17619,
#Partially deleted in new
chr20	45774212	45779893	chr20:45774212-45779893	0	-	45774212	45774212	8553170	3	232,186,49,	0,1204,5632,
#Partially deleted in new
chr20	45774212	45791900	chr20:45774212-45791900	0	-	45774212	45774212	8553170	5	232,186,147,129,69,	0,1204,13623,14718,17619,
#Partially deleted in new
chr20	45774304	45791903	chr20:45774304-45791903	0	-	45774304	45774304	8553170	4	140,186,147,72,	0,1112,13531,17527,
#Partially deleted in new
chr20	45774304	45791903	chr20:45774304-45791903	0	-	45774304	45774304	8553170	6	140,186,135,147,129,72,	0,1112,2770,13531,14626,17527,
#Partially deleted in new
chr20	45775416	45791915	chr20:45775416-45791915	0	-	45775416	45775416	8553170	4	186,132,129,84,	0,1658,13514,16415,
#Partially deleted in new
chr20	45775510	45791875	chr20:45775510-45791875	0	-	45775510	45775510	8553170	4	92,135,129,44,	0,1564,13420,16321,
#Deleted in new
chr20	45778697	45778823	chr20:45778697-45778823	3	+	45778697	45778697	8553170	1	126,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	45788210	45791868	chr20:45788210-45791868	0	-	45788210	45788210	8553170	2	849,37,	0,3621,
#Partially deleted in new
chr20	45791936	45811427	chr20:45791936-45811427	3	+	45792004	45811195	0	13	173,71,97,99,69,57,59,46,59,61,72,56,371,	0,740,1984,3408,9137,9465,10062,11396,13209,13369,17177,18948,19120,
#Partially deleted in new
chr20	45792019	45796573	chr20:45792019-45796573	0	+	45792019	45796553	789624	5	90,71,97,99,116,	0,657,1901,3325,4438,
#Partially deleted in new
chr20	45792054	45811427	chr20:45792054-45811427	0	+	45792054	45811195	789624	12	55,71,97,69,57,59,46,59,61,72,56,371,	0,622,1866,9019,9347,9944,11278,13091,13251,17059,18830,19002,
#Partially deleted in new
chr20	45792535	45802055	chr20:45792535-45802055	0	+	45792691	45802055	789624	6	212,97,99,69,57,57,	0,1385,2809,8538,8866,9463,
#Partially deleted in new
chr20	45793964	45811427	chr20:45793964-45811427	0	+	45793964	45811195	789624	10	53,99,69,57,59,46,59,61,56,371,	0,1380,7109,7437,8034,9368,11181,11341,16920,17092,
#Deleted in new
chr20	45802996	45805366	chr20:45802996-45805366	0	+	45802996	45802996	8553170	3	382,59,61,	0,2149,2309,
#Partially deleted in new
chr20	45812575	45816957	chr20:45812575-45816957	3	+	45812695	45816767	0	6	221,28,87,205,60,249,	0,861,1808,2965,3278,4133,
#Partially deleted in new
chr20	45812575	45816953	chr20:45812575-45816953	1	+	45812695	45815877	789624	5	221,28,87,60,245,	0,861,1808,3278,4133,
#Partially deleted in new
chr20	45812575	45816953	chr20:45812575-45816953	1	+	45812695	45816767	789624	5	221,28,151,60,245,	0,861,2814,3278,4133,
#Partially deleted in new
chr20	45812634	45816957	chr20:45812634-45816957	1	+	45812695	45816767	0	6	162,28,87,151,60,249,	0,802,1749,2755,3219,4074,
#Partially deleted in new
chr20	45812657	45816957	chr20:45812657-45816957	1	+	45812695	45815877	789624	4	139,28,60,249,	0,779,3196,4051,
#Partially deleted in new
chr20	45812673	45816957	chr20:45812673-45816957	1	+	45812695	45816767	0	5	123,28,205,60,249,	0,763,2867,3180,4035,
#Partially deleted in new
chr20	45813005	45816957	chr20:45813005-45816957	1	+	45813452	45816767	0	6	285,28,87,205,60,249,	0,431,1378,2535,2848,3703,
#Partially deleted in new
chr20	45814409	45816802	chr20:45814409-45816802	0	+	45814409	45814409	8553170	4	61,303,60,94,	0,1033,1444,2299,
#Partially deleted in new
chr20	45823213	45827341	chr20:45823213-45827341	3	-	45823347	45827248	789624	6	166,137,115,144,52,96,	0,777,1078,1281,1569,4032,
#Partially deleted in new
chr20	45823213	45833745	chr20:45823213-45833745	1	-	45823347	45824792	789624	7	166,137,115,144,52,78,88,	0,777,1078,1281,1569,10037,10444,
#Deleted in new
chr20	45833809	45835055	chr20:45833809-45835055	0	+	45833809	45833809	8553170	3	209,268,97,	0,391,1149,
#Partially deleted in new
chr20	45833830	45841134	chr20:45833830-45841134	1	+	45833919	45840657	789624	5	110,268,158,11,496,	0,370,1128,6617,6808,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	45833830	45841730	chr20:45833830-45841730	0	+	45833830	45833830	8553170	6	110,268,158,93,137,1092,	0,370,1128,4437,6491,6808,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	45833830	45838318	chr20:45833830-45838318	1	+	45833919	45838318	789624	4	110,268,158,51,	0,370,1128,4437,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	45833851	45842881	chr20:45833851-45842881	1	+	45833919	45842043	789624	5	89,268,158,142,849,	0,349,1107,6787,8181,
#Partially deleted in new
chr20	45833851	45841730	chr20:45833851-45841730	1	+	45833919	45841313	789624	4	89,268,158,1092,	0,349,1107,6787,
#Partially deleted in new
chr20	45833894	45841730	chr20:45833894-45841730	3	+	45834206	45841313	789624	3	574,158,1092,	0,1064,6744,
#Partially deleted in new
chr20	45834135	45840907	chr20:45834135-45840907	1	+	45834206	45840657	789624	4	333,158,11,269,	0,823,6312,6503,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	45834150	45843275	chr20:45834150-45843275	0	+	45834150	45834150	8553170	3	318,151,2637,	0,808,6488,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	45834356	45841171	chr20:45834356-45841171	0	+	45834356	45834356	8553170	5	112,158,93,11,533,	0,602,3911,6091,6282,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	45834576	45842881	chr20:45834576-45842881	0	+	45834576	45834576	8553170	3	540,11,2243,	0,5871,6062,
#Partially deleted in new
chr20	45834748	45840971	chr20:45834748-45840971	0	+	45834748	45834748	8553170	2	368,333,	0,5890,
#Partially deleted in new
chr20	45835032	45841090	chr20:45835032-45841090	0	+	45835032	45835032	8553170	3	84,137,452,	0,5289,5606,
#Partially deleted in new
chr20	45841720	45857406	chr20:45841720-45857406	3	-	45841837	45857315	789624	6	236,195,158,226,134,219,	0,1806,2542,6729,13438,15467,
#Partially deleted in new
chr20	45841725	45857389	chr20:45841725-45857389	0	-	45843737	45857315	789624	6	231,246,158,226,134,202,	0,1801,2537,6724,13433,15462,
#Partially deleted in new
chr20	45841737	45857402	chr20:45841737-45857402	0	-	45848479	45857315	789624	5	219,195,158,226,215,	0,1789,2525,6712,15450,
#Partially deleted in new
chr20	45841764	45855284	chr20:45841764-45855284	0	-	45841837	45855284	789624	4	192,158,226,126,	0,2498,6685,13394,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	45842022	45849110	chr20:45842022-45849110	0	-	45842022	45842022	8553170	2	2398,661,	0,6427,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	45842022	45857371	chr20:45842022-45857371	0	-	45842022	45842022	8553170	3	2398,226,184,	0,6427,15165,
#Partially deleted in new
chr20	45842746	45857369	chr20:45842746-45857369	0	-	45843363	45857315	789624	4	652,195,158,182,	0,780,1516,14441,
#Partially deleted in new
chr20	45843722	45857397	chr20:45843722-45857397	0	-	45843722	45843722	8553170	4	698,226,134,210,	0,4727,11436,13465,
#Partially deleted in new
chr20	45844262	45857371	chr20:45844262-45857371	0	-	45848600	45857315	789624	5	158,226,62,134,184,	0,4187,9660,10896,12925,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	45847629	45847940	chr20:45847629-45847940	3	-	45847629	45847629	8553170	1	311,	0,
#Partially deleted in new
chr20	45848532	45857405	chr20:45848532-45857405	0	-	45853956	45857315	789624	4	143,57,134,218,	0,5390,6626,8655,
#Partially deleted in new
chr20	45853419	45857196	chr20:45853419-45857196	0	-	45853904	45857196	789624	3	565,134,9,	0,1739,3768,
#Partially deleted in new
chr20	45853421	45857309	chr20:45853421-45857309	0	-	45853956	45857309	789624	3	558,134,122,	0,1737,3766,
#Partially deleted in new
chr20	45857616	45879122	chr20:45857616-45879122	3	+	45857825	45878649	789624	2	364,2409,	0,19097,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	45881226	45885266	chr20:45881226-45885266	3	+	45882592	45884050	789624	2	35,2734,	0,1306,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	45881240	45885265	chr20:45881240-45885265	1	+	45882592	45884050	789624	3	21,1866,281,	0,1292,3744,
#Deleted in new
chr20	45886488	45887635	chr20:45886488-45887635	3	-	45886516	45887590	789624	2	657,100,	0,1047,
#Partially deleted in new
chr20	45888624	45890476	chr20:45888624-45890476	0	-	45888843	45890476	789624	2	263,227,	0,1625,
#Partially deleted in new
chr20	45888633	45891287	chr20:45888633-45891287	3	-	45888757	45890991	789624	2	240,1038,	0,1616,
#Partially deleted in new
chr20	45890143	45898820	chr20:45890143-45898820	0	+	45891325	45893254	789624	15	1236,194,112,51,87,163,92,85,92,79,140,76,90,105,454,	0,1425,1772,2129,2254,2581,3076,3844,4506,4679,4850,6821,7573,7861,8223,
#Partially deleted in new
chr20	45891043	45898820	chr20:45891043-45898820	3	+	45891325	45898450	789624	15	336,194,112,51,87,156,92,85,92,79,140,76,90,105,454,	0,525,872,1229,1354,1681,2176,2944,3606,3779,3950,5921,6673,6961,7323,
#Deleted in new
chr20	45891312	45893299	chr20:45891312-45893299	0	+	45891325	45892398	789624	5	67,194,87,156,80,	0,256,1085,1412,1907,
#Partially deleted in new
chr20	45891321	45898820	chr20:45891321-45898820	1	+	45891325	45898450	789624	14	58,194,112,87,156,92,85,92,79,140,76,90,105,454,	0,247,594,1076,1403,1898,2666,3328,3501,3672,5643,6395,6683,7045,
#Deleted in new
chr20	45891334	45892764	chr20:45891334-45892764	0	+	45891334	45891334	8553170	5	45,194,112,212,40,	0,234,581,938,1390,
#Deleted in new
chr20	45891334	45892247	chr20:45891334-45892247	0	+	45891334	45891334	8553170	3	45,194,332,	0,234,581,
#Partially deleted in new
chr20	45891334	45898820	chr20:45891334-45898820	1	+	45891568	45898450	0	15	45,194,112,51,87,156,92,85,92,79,140,76,90,105,454,	0,234,581,938,1063,1390,1885,2653,3315,3488,3659,5630,6382,6670,7032,
#Partially deleted in new
chr20	45891340	45898820	chr20:45891340-45898820	1	+	45891568	45898450	0	15	85,194,112,51,87,156,92,85,92,79,140,76,90,105,454,	0,228,575,932,1057,1384,1879,2647,3309,3482,3653,5624,6376,6664,7026,
#Deleted in new
chr20	45891354	45892372	chr20:45891354-45892372	0	+	45891354	45891354	8553170	3	25,459,100,	0,214,918,
#Deleted in new
chr20	45891356	45892454	chr20:45891356-45892454	0	+	45891356	45891356	8553170	4	23,459,51,57,	0,212,916,1041,
#Partially deleted in new
chr20	45891375	45898786	chr20:45891375-45898786	1	+	45891568	45898450	0	14	387,112,51,87,156,92,85,92,79,140,76,90,105,420,	0,540,897,1022,1349,1844,2612,3274,3447,3618,5589,6341,6629,6991,
#Deleted in new
chr20	45891375	45892295	chr20:45891375-45892295	0	+	45891568	45892295	789624	4	74,194,112,23,	0,193,540,897,
#Partially deleted in new
chr20	45892305	45894329	chr20:45892305-45894329	0	+	45892305	45892305	8553170	5	18,87,156,92,342,	0,92,419,914,1682,
#Deleted in new
chr20	45892407	45893229	chr20:45892407-45893229	0	+	45892407	45892407	8553170	2	77,505,	0,317,
#Deleted in new
chr20	45892693	45893419	chr20:45892693-45893419	3	-	45892693	45892693	8553170	2	198,371,	0,355,
#Partially deleted in new
chr20	45892751	45895132	chr20:45892751-45895132	0	+	45892751	45895132	789624	6	129,92,85,92,69,139,	0,468,1236,1898,2081,2242,
#Partially deleted in new
chr20	45892960	45897794	chr20:45892960-45897794	0	+	45892960	45892960	8553170	7	351,85,92,79,140,76,78,	0,1027,1689,1862,2033,4004,4756,
#Deleted in new
chr20	45893987	45895250	chr20:45893987-45895250	0	+	45893987	45893987	8553170	4	85,92,79,257,	0,662,835,1006,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	45896380	45898820	chr20:45896380-45898820	0	+	45896380	45896380	8553170	2	1729,454,	0,1986,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	45896598	45897783	chr20:45896598-45897783	0	+	45896598	45896598	8553170	2	442,67,	0,1118,
#Deleted in new
chr20	45897625	45898627	chr20:45897625-45898627	0	+	45897625	45897625	8553170	3	181,202,261,	0,282,741,
#Partially deleted in new
chr20	45898620	45912152	chr20:45898620-45912152	1	-	45898940	45911452	789624	15	443,77,64,43,68,165,60,177,92,64,64,129,100,111,74,	0,841,1001,1215,3646,3819,6179,6321,7647,9071,9220,11321,12531,12732,13458,
#Partially deleted in new
chr20	45898759	45910937	chr20:45898759-45910937	1	-	45898940	45910006	789624	14	304,77,64,43,68,165,60,177,92,64,64,156,129,67,	0,702,862,1076,3507,3680,6040,6182,7508,8932,9081,10756,11182,12111,
#Partially deleted in new
chr20	45898759	45912147	chr20:45898759-45912147	3	-	45898940	45911452	789624	16	304,77,64,43,68,165,60,177,92,64,64,156,129,100,111,69,	0,702,862,1076,3507,3680,6040,6182,7508,8932,9081,10756,11182,12392,12593,13319,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr20	45898762	45912047	chr20:45898762-45912047	1	-	45898940	45911452	789624	15	301,77,64,43,68,165,60,177,92,64,64,156,129,100,695,	0,699,859,1073,3504,3677,6037,6179,7505,8929,9078,10753,11179,12389,12590,
#Partially deleted in new
chr20	45898805	45912155	chr20:45898805-45912155	1	-	45898940	45911452	789624	14	258,77,64,43,68,165,60,177,92,64,64,100,111,77,	0,656,816,1030,3461,3634,5994,6136,7462,8886,9035,12346,12547,13273,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	45926517	45935055	chr20:45926517-45935055	3	-	45926517	45926517	8553170	1	8538,	0,
#Partially deleted in new
chr20	45934627	45948023	chr20:45934627-45948023	3	+	45938999	45947755	0	17	177,168,143,125,138,131,155,148,84,100,163,173,87,185,94,176,500,	0,2790,4353,4587,5847,6181,6425,8469,8712,9038,10240,11083,11401,11572,12445,12635,12896,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	45934732	45937972	chr20:45934732-45937972	0	+	45934732	45934732	8553170	2	72,555,	0,2685,
#Deleted in new
chr20	45945006	45948023	chr20:45945006-45948023	0	+	45945006	45947613	789624	6	24,173,87,185,94,761,	0,704,1022,1193,2066,2256,
#Partially deleted in new
chr20	45948652	45972172	chr20:45948652-45972172	3	-	45948952	45971410	789624	28	428,82,66,84,78,104,155,143,375,112,260,95,94,233,161,77,117,19,113,178,253,147,141,294,78,241,251,51,	0,517,680,832,1147,1313,1566,1800,3494,3945,5036,8933,9182,10548,11555,11796,11963,12211,13417,14820,15085,16975,18841,19081,19632,20798,22557,23469,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	45961505	45964516	chr20:45961505-45964516	0	-	45961505	45961505	8553170	2	677,1044,	0,1967,
#Partially deleted in new
chr20	45965692	45970225	chr20:45965692-45970225	0	-	45965692	45965692	8553170	5	82,141,294,78,775,	0,1801,2041,2592,3758,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	45966866	45968858	chr20:45966866-45968858	0	-	45966866	45966866	8553170	2	768,1125,	0,867,
#Partially deleted in new
chr20	45975248	45976075	chr20:45975248-45976075	7	-	45975248	45975248	16724991	2	254,272,	0,555,
#Partially deleted in new
chr20	46008907	46016561	chr20:46008907-46016561	3	+	46008926	46016368	0	13	157,233,149,129,174,174,177,156,280,140,151,104,312,	0,958,1575,2014,2235,2666,3229,3519,4347,4749,5216,5463,7342,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	46013499	46022073	chr20:46013499-46022073	3	-	46013499	46013499	789624	3	1289,118,550,	0,6231,8024,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	46020618	46021727	chr20:46020618-46021727	0	-	46020618	46020618	8553170	2	287,204,	0,905,
#Partially deleted in new
chr20	46021689	46057702	chr20:46021689-46057702	1	+	46021765	46057605	789624	26	197,95,132,147,55,131,242,212,171,99,58,175,119,99,120,105,169,196,170,132,108,123,200,15,134,189,	0,13258,13714,14087,15051,15565,18683,19639,21463,21943,22186,23276,24188,24648,25764,26291,27932,29985,31267,31888,33226,34460,34675,35207,35480,35824,
#Deleted in new
chr20	46021698	46023581	chr20:46021698-46023581	1	+	46021765	46023409	789624	2	188,213,	0,1670,
#Deleted in new
chr20	46021711	46023581	chr20:46021711-46023581	1	+	46021765	46023381	789624	3	175,229,213,	0,1131,1657,
#Partially deleted in new
chr20	46021775	46027799	chr20:46021775-46027799	0	+	46021775	46021775	8553170	2	111,137,	0,5887,
#Deleted in new
chr20	46021838	46023589	chr20:46021838-46023589	0	+	46021838	46023381	789624	3	48,142,221,	0,1091,1530,
#Deleted in new
chr20	46022708	46023396	chr20:46022708-46023396	0	+	46022708	46022708	8553170	2	363,28,	0,660,
#Deleted in new
chr20	46029008	46037275	chr20:46029008-46037275	0	+	46035027	46037275	789624	6	121,95,132,147,55,21,	0,5939,6395,6768,7732,8246,
#Partially deleted in new
chr20	46029181	46060152	chr20:46029181-46060152	3	+	46029344	46057605	789624	26	215,95,132,147,55,131,242,212,171,99,58,175,119,99,120,105,169,196,170,132,108,123,200,15,134,2639,	0,5766,6222,6595,7559,8073,11191,12147,13971,14451,14694,15784,16696,17156,18272,18799,20440,22493,23775,24396,25734,26968,27183,27715,27988,28332,
#Partially deleted in new
chr20	46029181	46060150	chr20:46029181-46060150	1	+	46029344	46058738	789624	11	215,95,132,147,55,131,242,212,171,60,1495,	0,5766,6222,6595,7559,8073,11191,12147,13971,14451,29474,
#Partially deleted in new
chr20	46029181	46060150	chr20:46029181-46060150	1	+	46029344	46058738	789624	7	215,95,132,147,55,131,1670,	0,5766,6222,6595,7559,8073,29299,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	46029181	46041183	chr20:46029181-46041183	0	+	46029181	46029181	8553170	6	215,95,132,147,55,811,	0,5766,6222,6595,7559,11191,
#Partially deleted in new
chr20	46029181	46060150	chr20:46029181-46060150	1	+	46029344	46059632	789624	7	215,95,132,147,55,28,552,	0,5766,6222,6595,7559,8073,30417,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	46029181	46041183	chr20:46029181-46041183	0	+	46029181	46029181	8553170	6	215,588,147,55,131,811,	0,5766,6595,7559,8073,11191,
#Deleted in new
chr20	46029183	46035889	chr20:46029183-46035889	0	+	46029344	46035403	789624	4	213,95,162,113,	0,5764,6190,6593,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	46029195	46041160	chr20:46029195-46041160	0	+	46029195	46029195	8553170	7	201,95,132,147,55,131,788,	0,5752,6208,6581,7545,8059,11177,
#Partially deleted in new
chr20	46029223	46049653	chr20:46029223-46049653	0	+	46029344	46045929	789624	11	173,95,132,147,55,28,119,99,120,105,32,	0,5724,6180,6553,7517,8031,16654,17114,18230,18757,20398,
#Deleted in new
chr20	46029331	46034957	chr20:46029331-46034957	0	+	46029331	46029331	8553170	2	65,35,	0,5591,
#Deleted in new
chr20	46036147	46037263	chr20:46036147-46037263	0	+	46036147	46036147	8553170	3	36,55,9,	0,593,1107,
#Deleted in new
chr20	46036570	46036770	chr20:46036570-46036770	0	+	46036570	46036570	8553170	2	70,30,	0,170,
#Deleted in new
chr20	46043192	46043864	chr20:46043192-46043864	0	+	46043192	46043192	8553170	2	131,232,	0,440,
#Deleted in new
chr20	46044760	46045929	chr20:46044760-46045929	0	+	46044760	46044760	8553170	2	380,52,	0,1117,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	46055846	46056510	chr20:46055846-46056510	0	+	46055846	46055846	8553170	2	426,146,	0,518,
#Deleted in new
chr20	46057232	46058300	chr20:46057232-46058300	0	+	46057232	46058273	789624	2	71,29,	0,1039,
#Partially deleted in new
chr20	46060984	46089952	chr20:46060984-46089952	3	-	46062299	46079424	0	8	1905,321,200,127,137,327,67,136,	0,2375,4044,6070,7517,9225,18402,28832,
#Partially deleted in new
chr20	46067054	46089952	chr20:46067054-46089952	0	-	46067054	46070259	789624	4	127,137,327,136,	0,1447,3155,22762,
#Deleted in new
chr20	46099517	46100176	chr20:46099517-46100176	7	+	46099517	46099517	16724991	1	659,	0,
#Partially deleted in new
chr20	46118271	46129863	chr20:46118271-46129863	3	+	46118343	46129040	0	9	123,79,126,147,94,62,87,29,982,	0,3548,3961,4338,4854,8368,9866,10058,10610,
#Partially deleted in new
chr20	46118277	46129659	chr20:46118277-46129659	1	+	46118343	46128031	789624	7	117,79,126,147,246,29,778,	0,3542,3955,4332,9701,10052,10604,
#Partially deleted in new
chr20	46118315	46129863	chr20:46118315-46129863	1	+	46118343	46128357	0	8	79,79,126,147,94,87,29,982,	0,3504,3917,4294,4810,9822,10014,10566,
#Partially deleted in new
chr20	46118347	46129126	chr20:46118347-46129126	0	+	46118347	46128155	789624	8	47,79,126,147,62,87,29,245,	0,3472,3885,4262,8292,9790,9982,10534,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	46118350	46129863	chr20:46118350-46129863	0	+	46118350	46118350	8553170	10	44,79,126,147,94,62,83,87,29,982,	0,3469,3882,4259,4775,8289,8856,9787,9979,10531,
#Partially deleted in new
chr20	46118372	46129004	chr20:46118372-46129004	0	+	46118372	46118372	8553170	8	22,175,126,147,62,87,29,123,	0,3351,3860,4237,8267,9765,9957,10509,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	46122317	46127161	chr20:46122317-46127161	0	+	46122317	46122317	8553170	3	41,147,522,	0,292,4322,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	46168403	46171237	chr20:46168403-46171237	3	-	46168403	46168403	8553170	2	1672,465,	0,2369,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	46173732	46251695	chr20:46173732-46251695	1	-	46174505	46251294	789624	11	1345,252,118,122,137,254,194,168,120,295,656,	0,4213,12855,13093,25690,36574,39262,43093,53775,67230,77307,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	46173733	46308498	chr20:46173733-46308498	3	-	46174505	46251294	789624	12	1344,252,118,122,137,254,194,168,120,295,654,244,	0,4212,12854,13092,25689,36573,39261,43092,53774,67229,77306,134521,
#Partially deleted in new
chr20	46209820	46220849	chr20:46209820-46220849	0	-	46209820	46209820	8553170	5	740,194,168,116,422,	0,3174,7005,9977,10607,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	46345979	46364404	chr20:46345979-46364404	1	-	46350393	46358506	789624	10	4545,130,176,84,106,73,64,151,377,34,	0,4781,6071,8902,9093,9822,10594,11643,12407,18391,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	46349527	46364401	chr20:46349527-46364401	3	-	46350393	46358506	789624	10	997,130,176,84,169,73,64,151,572,31,	0,1233,2523,5354,5545,6274,7046,8095,8859,14843,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	46349527	46363174	chr20:46349527-46363174	1	-	46350393	46358506	789624	10	997,130,176,84,169,73,64,151,572,89,	0,1233,2523,5354,5545,6274,7046,8095,8859,13558,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	46349527	46364395	chr20:46349527-46364395	1	-	46350393	46358506	789624	10	997,130,176,84,169,73,64,151,377,25,	0,1233,2523,5354,5545,6274,7046,8095,8859,14843,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	46349527	46353197	chr20:46349527-46353197	0	-	46349527	46349527	8553170	2	1363,1147,	0,2523,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	46349529	46364458	chr20:46349529-46364458	1	-	46350393	46358725	789624	11	995,130,176,84,169,73,64,151,172,73,88,	0,1231,2521,5352,5543,6272,7044,8093,8857,9161,14841,
#Partially deleted in new
chr20	46350354	46355195	chr20:46350354-46355195	0	-	46350354	46350354	8553170	4	536,176,84,123,	0,1696,4527,4718,
#Partially deleted in new
chr20	46350770	46357701	chr20:46350770-46357701	0	-	46350770	46350770	8553170	7	120,176,84,207,73,64,79,	0,1280,4111,4302,5031,5803,6852,
#Partially deleted in new
chr20	46352122	46364390	chr20:46352122-46364390	0	-	46352122	46352122	8553170	8	104,84,169,73,64,80,377,20,	0,2759,2950,3679,4451,5500,6264,12248,
#Partially deleted in new
chr20	46352149	46364381	chr20:46352149-46364381	0	-	46352149	46352149	8553170	8	77,84,106,73,64,80,377,11,	0,2732,2923,3652,4424,5473,6237,12221,
#Partially deleted in new
chr20	46352163	46358506	chr20:46352163-46358506	0	-	46352163	46358506	789624	6	63,84,106,64,151,120,	0,2718,2909,4410,5459,6223,
#Partially deleted in new
chr20	46355103	46358764	chr20:46355103-46358764	0	-	46355103	46358506	789624	4	138,64,151,378,	0,1470,2519,3283,
#Partially deleted in new
chr20	46358426	46364361	chr20:46358426-46364361	0	-	46358426	46358426	8553170	2	532,322,	0,5613,
#Partially deleted in new
chr20	46364550	46390885	chr20:46364550-46390885	3	+	46364550	46364550	8553170	5	170,72,123,91,138,	0,2414,15448,23149,26197,
#Partially deleted in new
chr20	46366048	46406617	chr20:46366048-46406617	1	-	46367359	46394482	789624	22	1512,78,83,108,113,164,137,109,105,135,123,51,79,152,100,182,51,73,41,128,75,70,	0,2842,4394,5303,5530,5757,7350,8283,8487,9187,9619,14204,17367,20075,21289,22990,27044,27480,28000,28356,32648,40499,
#Partially deleted in new
chr20	46366049	46406559	chr20:46366049-46406559	1	-	46367359	46389199	789624	22	1511,78,83,108,113,164,137,109,105,135,123,51,79,152,100,182,51,73,109,128,75,12,	0,2841,4393,5302,5529,5756,7349,8282,8486,9186,9618,14203,17366,20074,21288,22989,27043,27479,27931,28355,32647,40498,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	46366049	46375771	chr20:46366049-46375771	0	-	46370175	46375771	789624	10	1511,1635,108,113,164,137,109,105,135,104,	0,2841,5302,5529,5756,7349,8282,8486,9186,9618,
#Partially deleted in new
chr20	46366053	46373515	chr20:46366053-46373515	0	-	46367359	46373515	789624	7	1507,78,71,108,113,164,117,	0,2837,4389,5298,5525,5752,7345,
#Partially deleted in new
chr20	46366054	46406632	chr20:46366054-46406632	3	-	46367359	46394482	789624	21	1506,78,83,108,113,164,137,109,105,135,123,51,79,152,100,182,51,73,41,99,85,	0,2836,4388,5297,5524,5751,7344,8277,8481,9181,9613,14198,17361,20069,21283,22984,27038,27474,27994,28350,40493,
#Partially deleted in new
chr20	46367359	46394482	chr20:46367359-46394482	1	-	46367359	46394482	789624	20	201,78,83,108,113,164,137,109,105,135,123,51,79,152,94,182,51,73,41,78,	0,1531,3083,3992,4219,4446,6039,6972,7176,7876,8308,12893,16056,18764,19978,21679,25733,26169,26689,27045,
#Partially deleted in new
chr20	46370442	46373495	chr20:46370442-46373495	0	-	46370442	46370442	8553170	5	71,108,113,164,97,	0,909,1136,1363,2956,
#Partially deleted in new
chr20	46372834	46386164	chr20:46372834-46386164	0	-	46373374	46386164	789624	8	701,109,105,135,123,51,79,41,	0,1497,1701,2401,2833,7418,10581,13289,
#Partially deleted in new
chr20	46373240	46386164	chr20:46373240-46386164	0	-	46373240	46373240	8553170	8	295,109,105,135,123,51,79,41,	0,1091,1295,1995,2427,7012,10175,12883,
#Deleted in new
chr20	46374350	46376967	chr20:46374350-46376967	0	-	46374350	46374350	8553170	5	90,105,135,123,264,	0,185,885,1317,2353,
#Partially deleted in new
chr20	46374437	46406599	chr20:46374437-46406599	0	-	46374437	46374437	8553170	14	3,105,135,123,51,79,152,182,51,73,41,128,75,52,	0,98,798,1230,5815,8978,11686,14601,18655,19091,19611,19967,24259,32110,
#Partially deleted in new
chr20	46375285	46406604	chr20:46375285-46406604	0	-	46375285	46394482	789624	13	85,123,51,79,152,100,182,51,73,41,99,75,57,	0,382,4967,8130,10838,12052,13753,17807,18243,18763,19119,23411,31262,
#Partially deleted in new
chr20	46379918	46386165	chr20:46379918-46386165	0	-	46379918	46379918	8553170	3	385,79,42,	0,3497,6205,
#Partially deleted in new
chr20	46383415	46406615	chr20:46383415-46406615	0	-	46383415	46383415	8553170	9	79,152,100,182,51,73,41,128,68,	0,2708,3922,5623,9677,10113,10633,10989,23132,
#Partially deleted in new
chr20	46383467	46406615	chr20:46383467-46406615	0	-	46383467	46383467	8553170	8	27,152,100,182,51,41,128,68,	0,2656,3870,5571,9625,10581,10937,23080,
#Partially deleted in new
chr20	46386123	46406624	chr20:46386123-46406624	0	-	46386123	46386123	8553170	8	152,100,182,51,41,99,75,77,	0,1214,2915,6969,7925,8281,12573,20424,
#Partially deleted in new
chr20	46387426	46432985	chr20:46387426-46432985	0	-	46387426	46387426	8553170	8	11,182,51,73,41,128,75,92,	0,1612,5666,6102,6622,6978,11270,45467,
#Partially deleted in new
chr20	46387504	46394437	chr20:46387504-46394437	0	-	46387504	46387504	8553170	6	118,182,51,73,41,33,	0,1534,5588,6024,6544,6900,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	46414227	46459276	chr20:46414227-46459276	7	-	46414227	46414227	16724991	4	737,1609,318,58,	0,41667,43369,44991,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	46455032	46481357	chr20:46455032-46481357	3	-	46455032	46455032	8553170	5	2882,404,188,94,308,	0,4186,19468,21199,26017,
#Deleted in new
chr20	46455954	46457085	chr20:46455954-46457085	5	-	46455954	46455954	16724991	1	1131,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	46456598	46496731	chr20:46456598-46496731	0	-	46456598	46456598	8553170	6	1316,188,94,140,236,21,	0,17902,19633,28930,36083,40112,
#Partially deleted in new
chr20	46463718	46477232	chr20:46463718-46477232	7	-	46463718	46463718	16724991	3	1323,188,254,	0,10782,13260,
#Deleted in new
chr20	46463899	46465270	chr20:46463899-46465270	5	-	46463899	46463899	16724991	1	1371,	0,
#Partially deleted in new
chr20	46484460	46492640	chr20:46484460-46492640	7	+	46484460	46484460	16724991	3	127,96,1773,	0,539,6407,
#Partially deleted in new
chr20	46499629	46509622	chr20:46499629-46509622	1	-	46501295	46509622	789624	4	3468,93,127,18,	0,4584,4984,9975,
#Partially deleted in new
chr20	46499631	46513554	chr20:46499631-46513554	3	-	46501295	46512102	789624	5	3466,93,127,59,145,	0,4582,4982,12450,13778,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	46501061	46513559	chr20:46501061-46513559	1	-	46501295	46504647	789624	6	2036,93,127,152,59,1020,	0,3152,3552,5245,11020,11478,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	46501067	46506638	chr20:46501067-46506638	1	-	46501295	46506343	789624	4	2030,146,127,332,	0,3146,3546,5239,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	46501087	46513555	chr20:46501087-46513555	1	-	46501295	46509622	789624	6	2010,93,127,147,59,59,	0,3126,3526,8517,10994,12409,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	46502704	46506370	chr20:46502704-46506370	0	-	46502704	46504647	789624	3	393,93,1757,	0,1509,1909,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	46540945	46550574	chr20:46540945-46550574	3	-	46541273	46550560	789624	3	982,1003,58,	0,4381,9571,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	46557822	46670139	chr20:46557822-46670139	1	-	46560021	46613695	789624	13	2376,138,162,113,98,105,96,126,186,67,164,266,97,	0,5591,8406,17750,25749,30236,31337,34581,38334,42148,52623,55637,112220,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	46557832	46651440	chr20:46557832-46651440	3	-	46560021	46651421	789624	13	2366,138,162,113,98,105,96,126,186,67,164,266,130,	0,5581,8396,17740,25739,30226,31327,34571,38324,42138,52613,55627,93478,
#Partially deleted in new
chr20	46558428	46670139	chr20:46558428-46670139	1	-	46560021	46613695	789624	12	1770,138,162,113,98,96,126,186,67,164,266,97,	0,4985,7800,17144,25143,30731,33975,37728,41542,52017,55031,111614,
#Partially deleted in new
chr20	46559710	46651459	chr20:46559710-46651459	1	-	46560021	46651421	789624	12	488,138,162,113,98,105,96,43,186,164,266,149,	0,3703,6518,15862,23861,28348,29449,32693,36446,50735,53749,91600,
#Partially deleted in new
chr20	46559993	46613886	chr20:46559993-46613886	1	-	46560021	46613695	789624	12	205,138,162,113,98,105,96,126,186,67,164,427,	0,3420,6235,15579,23578,28065,29166,32410,36163,39977,50452,53466,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	46566355	46676075	chr20:46566355-46676075	0	-	46566355	46613695	789624	13	35,113,98,105,96,126,186,67,164,266,97,115,129,	0,9217,17216,21703,22804,26048,29801,33615,44090,47104,103687,107308,109591,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	46582910	46588091	chr20:46582910-46588091	0	-	46582910	46582910	8553170	2	759,33,	0,5148,
#Partially deleted in new
chr20	46583571	46600616	chr20:46583571-46600616	0	-	46583571	46600616	789624	7	98,105,96,126,186,67,29,	0,4487,5588,8832,12585,16399,17016,
#Partially deleted in new
chr20	46585347	46613725	chr20:46585347-46613725	0	-	46585697	46613725	789624	7	396,105,96,43,186,164,266,	0,2711,3812,7056,10809,25098,28112,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	46588142	46684467	chr20:46588142-46684467	0	-	46588142	46613695	789624	7	21,96,43,186,164,266,72,	0,1017,4261,8014,22303,25317,96253,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	46608708	46670139	chr20:46608708-46670139	1	-	46608899	46613695	789624	4	349,164,266,97,	0,1737,4751,61334,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	46681675	46682375	chr20:46681675-46682375	3	-	46681675	46681675	8553170	1	700,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	46684364	46689779	chr20:46684364-46689779	2	-	46686752	46689414	789624	2	2867,648,	0,4767,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	46685533	46689440	chr20:46685533-46689440	1	-	46687153	46689414	789624	2	1698,314,	0,3593,
#Deleted in new
chr20	46689658	46690289	chr20:46689658-46690289	3	+	46689658	46689658	8553170	1	631,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	46709486	46736347	chr20:46709486-46736347	3	+	46709736	46733834	789624	5	254,1284,123,136,2592,	0,15554,17377,19866,24269,
#Deleted in new
chr20	46709698	46710437	chr20:46709698-46710437	1	+	46709736	46710020	789624	2	42,455,	0,284,
#Partially deleted in new
chr20	46714466	46725470	chr20:46714466-46725470	0	+	46714466	46714466	8553170	2	156,430,	0,10574,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	46859332	46859672	chr20:46859332-46859672	3	+	46859332	46859332	8553170	1	340,	0,
#Deleted in new
chr20	46863562	46864104	chr20:46863562-46864104	7	-	46863562	46863562	16724991	1	542,	0,
#Partially deleted in new
chr20	46894623	47188844	chr20:46894623-47188844	3	+	46990010	47188133	0	16	364,119,46,143,117,68,178,143,84,90,59,161,115,122,101,792,	0,95377,106804,110318,121557,177561,179534,194615,202461,248435,274515,278083,285174,286191,288667,293429,
#Partially deleted in new
chr20	46894623	47188844	chr20:46894623-47188844	1	+	46990010	47188133	0	14	364,119,46,143,117,68,178,143,84,90,59,161,101,792,	0,95377,106804,110318,121557,177561,179534,194615,202461,248435,274515,278083,288667,293429,
#Partially deleted in new
chr20	46894623	47188844	chr20:46894623-47188844	1	+	46990010	47188133	789624	15	364,119,46,143,117,68,178,143,84,59,161,115,122,101,792,	0,95377,106804,110318,121557,177561,179534,194615,202461,274515,278083,285174,286191,288667,293429,
#Partially deleted in new
chr20	46894869	47188844	chr20:46894869-47188844	1	+	46990010	47188133	0	16	118,119,46,138,50,68,178,143,84,90,59,161,115,122,101,792,	0,95131,106558,110072,121378,177315,179288,194369,202215,248189,274269,277837,284928,285945,288421,293183,
#Deleted in new
chr20	46901142	46901726	chr20:46901142-46901726	3	-	46901142	46901142	8553170	2	123,300,	0,284,
#Partially deleted in new
chr20	46978234	46990070	chr20:46978234-46990070	0	+	46978234	46978234	8553170	2	402,70,	0,11766,
#Partially deleted in new
chr20	46979482	46990025	chr20:46979482-46990025	0	+	46979482	46979482	8553170	2	148,25,	0,10518,
#Partially deleted in new
chr20	46979691	46990025	chr20:46979691-46990025	0	+	46979691	46979691	8553170	2	98,25,	0,10309,
#Partially deleted in new
chr20	46990000	47188136	chr20:46990000-47188136	1	+	46990010	47188133	789624	14	119,46,143,117,68,178,143,84,59,161,115,122,101,84,	0,11427,14941,26180,82184,84157,99238,107084,179138,182706,189797,190814,193290,198052,
#Deleted in new
chr20	46997595	46998488	chr20:46997595-46998488	7	+	46997595	46997595	16724991	1	893,	0,
#Partially deleted in new
chr20	47001459	47143149	chr20:47001459-47143149	0	+	47001459	47143149	789624	6	14,143,117,143,84,91,	0,3482,14721,87779,95625,141599,
#Deleted in new
chr20	47071864	47072236	chr20:47071864-47072236	7	+	47071864	47071864	16724991	1	372,	0,
#Partially deleted in new
chr20	47089238	47096080	chr20:47089238-47096080	0	+	47089238	47089238	8553170	2	143,267,	0,6575,
#Deleted in new
chr20	47160837	47161700	chr20:47160837-47161700	7	-	47160837	47160837	16724991	1	863,	0,
#Deleted in new
chr20	47166966	47167058	chr20:47166966-47167058	3	+	47166966	47166966	5263520	1	92,	0,
#Partially deleted in new
chr20	47209213	47355657	chr20:47209213-47355657	1	-	47210760	47347880	0	22	1684,67,161,240,79,81,191,381,510,153,141,482,116,78,56,88,93,114,219,149,71,208,	0,11044,12100,15103,17989,20512,27112,29544,36794,40073,53074,67100,72888,74357,78015,80973,82582,85452,89515,100842,138642,146236,
#Partially deleted in new
chr20	47209213	47356889	chr20:47209213-47356889	1	-	47210760	47347880	0	24	1684,84,67,161,240,79,81,191,381,510,153,141,482,116,78,56,88,93,114,219,149,71,71,233,	0,3428,11044,12100,15103,17989,20512,27112,29544,36794,40073,53074,67100,72888,74357,78015,80973,82582,85452,89515,100842,138642,146236,147443,
#Partially deleted in new
chr20	47209213	47356706	chr20:47209213-47356706	1	-	47210760	47356670	0	22	1684,67,161,240,79,81,191,243,510,153,141,482,116,78,56,88,93,114,144,149,71,50,	0,11044,12100,15103,17989,20512,27112,29682,36794,40073,53074,67100,72888,74357,78015,80973,82582,85452,89515,100842,138642,147443,
#Partially deleted in new
chr20	47209213	47356889	chr20:47209213-47356889	1	-	47210760	47347880	0	22	1684,84,67,161,240,79,81,191,243,510,153,141,482,116,78,56,88,93,144,149,71,233,	0,3428,11044,12100,15103,17989,20512,27112,29682,36794,40073,53074,67100,72888,74357,78015,80973,82582,89515,100842,138642,147443,
#Partially deleted in new
chr20	47209213	47356889	chr20:47209213-47356889	1	-	47210760	47349889	0	24	1684,67,161,240,79,81,191,381,510,153,141,482,116,78,56,88,93,114,144,149,71,128,71,233,	0,11044,12100,15103,17989,20512,27112,29544,36794,40073,53074,67100,72888,74357,78015,80973,82582,85452,89515,100842,138642,140647,146236,147443,
#Partially deleted in new
chr20	47209213	47356889	chr20:47209213-47356889	1	-	47210760	47347880	0	23	1684,84,67,161,240,79,81,191,381,510,153,141,482,116,78,56,88,93,114,219,149,71,233,	0,3428,11044,12100,15103,17989,20512,27112,29544,36794,40073,53074,67100,72888,74357,78015,80973,82582,85452,89515,100842,138642,147443,
#Partially deleted in new
chr20	47209213	47356414	chr20:47209213-47356414	1	-	47210760	47356414	0	23	1684,84,67,161,240,79,81,191,381,510,153,141,482,116,78,56,88,93,114,219,149,71,35,	0,3428,11044,12100,15103,17989,20512,27112,29544,36794,40073,53074,67100,72888,74357,78015,80973,82582,85452,89515,100842,138642,147166,
#Partially deleted in new
chr20	47209213	47356889	chr20:47209213-47356889	1	-	47210760	47347880	789624	22	1684,84,67,161,240,79,81,191,510,153,141,482,116,78,56,88,93,114,219,149,71,233,	0,3428,11044,12100,15103,17989,20512,27112,36794,40073,53074,67100,72888,74357,78015,80973,82582,85452,89515,100842,138642,147443,
#Partially deleted in new
chr20	47209213	47356889	chr20:47209213-47356889	1	-	47210657	47347880	789624	15	1684,425,153,141,482,116,78,56,88,93,114,144,149,71,233,	0,36879,40073,53074,67100,72888,74357,78015,80973,82582,85452,89515,100842,138642,147443,
#Partially deleted in new
chr20	47210246	47356720	chr20:47210246-47356720	1	-	47210760	47356670	0	21	651,67,161,240,79,81,191,510,153,141,482,116,78,56,88,93,114,144,149,71,64,	0,10011,11067,14070,16956,19479,26079,35761,39040,52041,66067,71855,73324,76982,79940,81549,84419,88482,99809,137609,146410,
#Partially deleted in new
chr20	47210412	47356823	chr20:47210412-47356823	1	-	47210760	47347880	0	24	485,84,67,161,240,79,81,191,243,510,153,141,482,116,78,56,88,93,114,219,149,71,71,167,	0,2229,9845,10901,13904,16790,19313,25913,28483,35595,38874,51875,65901,71689,73158,76816,79774,81383,84253,88316,99643,137443,145037,146244,
#Partially deleted in new
chr20	47210412	47298900	chr20:47210412-47298900	0	-	47210760	47298900	789624	20	485,84,67,161,240,79,81,191,243,510,153,141,482,116,78,56,88,93,114,172,	0,2229,9845,10901,13904,16790,19313,25913,28483,35595,38874,51875,65901,71689,73158,76816,79774,81383,84253,88316,
#Partially deleted in new
chr20	47210439	47356697	chr20:47210439-47356697	1	-	47210760	47356670	0	23	458,84,67,161,240,79,81,191,381,510,153,141,482,116,78,56,88,93,114,219,149,71,41,	0,2202,9818,10874,13877,16763,19286,25886,28318,35568,38847,51848,65874,71662,73131,76789,79747,81356,84226,88289,99616,137416,146217,
#Partially deleted in new
chr20	47210440	47356699	chr20:47210440-47356699	1	-	47210760	47356670	0	22	457,67,161,240,79,81,191,243,510,153,141,482,116,78,56,88,93,114,219,149,71,43,	0,9817,10873,13876,16762,19285,25885,28455,35567,38846,51847,65873,71661,73130,76788,79746,81355,84225,88288,99615,137415,146216,
#Partially deleted in new
chr20	47210760	47356670	chr20:47210760-47356670	3	-	47210760	47356670	0	23	137,84,67,161,240,79,81,191,243,510,153,141,482,116,78,56,88,93,114,219,149,71,14,	0,1881,9497,10553,13556,16442,18965,25565,28135,35247,38526,51527,65553,71341,72810,76468,79426,81035,83905,87968,99295,137095,145896,
#Partially deleted in new
chr20	47210760	47356670	chr20:47210760-47356670	1	-	47210760	47356670	0	21	137,67,161,240,79,81,191,381,510,153,482,116,78,56,88,93,114,144,149,71,14,	0,9497,10553,13556,16442,18965,25565,27997,35247,38526,65553,71341,72810,76468,79426,81035,83905,87968,99295,137095,145896,
#Partially deleted in new
chr20	47210760	47356670	chr20:47210760-47356670	1	-	47210760	47356670	789624	22	137,84,67,161,240,79,191,243,510,153,141,482,116,78,56,88,93,114,144,149,71,14,	0,1881,9497,10553,13556,16442,25565,28135,35247,38526,51527,65553,71341,72810,76468,79426,81035,83905,87968,99295,137095,145896,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	47237309	47319061	chr20:47237309-47319061	0	-	47237309	47237309	8553170	14	1829,510,153,141,482,116,78,56,88,93,114,144,149,111,	0,8698,11977,24978,39004,44792,46261,49919,52877,54486,57356,61419,72746,81641,
#Partially deleted in new
chr20	47291795	47356684	chr20:47291795-47356684	0	-	47291795	47347880	789624	7	93,114,144,149,71,71,28,	0,2870,6933,18260,56060,63654,64861,
#Partially deleted in new
chr20	47310102	47351877	chr20:47310102-47351877	0	-	47310102	47347880	789624	3	102,71,168,	0,37753,41607,
#Partially deleted in new
chr20	47310156	47348072	chr20:47310156-47348072	0	-	47310156	47347880	789624	3	48,71,56,	0,37699,37860,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	47318501	47320754	chr20:47318501-47320754	3	+	47318501	47318501	5263520	1	2253,	0,
#Deleted in new
chr20	47348136	47349142	chr20:47348136-47349142	3	-	47348136	47348136	8553170	1	1006,	0,
#Deleted in new
chr20	47352560	47354633	chr20:47352560-47354633	3	+	47352560	47352560	789624	2	180,1629,	0,444,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	47391928	47412327	chr20:47391928-47412327	3	-	47391928	47391928	8553170	4	169,197,126,258,	0,5220,19339,20141,
#Partially deleted in new
chr20	47478213	47479010	chr20:47478213-47479010	7	-	47478213	47478213	16724991	2	306,20,	0,777,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	47484277	47484381	chr20:47484277-47484381	3	-	47484277	47484277	8553170	1	104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	47492977	47493085	chr20:47492977-47493085	3	-	47492977	47492977	8553170	1	108,	0,
#Partially deleted in new
chr20	47501901	47656877	chr20:47501901-47656877	1	+	47622247	47653417	0	23	118,79,102,173,101,175,189,102,141,148,392,872,136,195,246,127,172,294,93,295,175,142,3472,	0,81281,120327,122009,123479,125100,125659,126020,131594,132146,133420,133989,135746,137106,137675,138023,140311,145171,147103,149080,150504,151029,151504,
#Partially deleted in new
chr20	47501926	47653619	chr20:47501926-47653619	3	+	47622247	47653417	0	23	93,79,102,173,101,175,189,102,141,148,392,872,136,195,246,127,172,294,105,295,175,142,214,	0,81256,120302,121984,123454,125075,125634,125995,131569,132121,133395,133964,135721,137081,137650,137998,140286,145146,147078,149055,150479,151004,151479,
#Partially deleted in new
chr20	47501940	47655742	chr20:47501940-47655742	1	+	47622247	47653417	0	23	79,79,102,173,101,175,189,102,141,178,392,872,136,195,201,127,172,294,93,295,175,142,2337,	0,81242,120288,121970,123440,125061,125620,125981,131555,132077,133381,133950,135707,137067,137681,137984,140272,145132,147064,149041,150465,150990,151465,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	47622957	47624073	chr20:47622957-47624073	0	+	47622957	47622957	8553170	2	63,163,	0,953,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	47627001	47628790	chr20:47627001-47628790	0	+	47627001	47627001	8553170	4	175,189,102,358,	0,559,920,1431,
#Partially deleted in new
chr20	47630265	47631438	chr20:47630265-47631438	7	-	47630265	47630265	16724991	2	191,669,	0,504,
#Deleted in new
chr20	47656347	47657567	chr20:47656347-47657567	0	-	47656347	47656347	8553170	2	96,316,	0,904,
#Partially deleted in new
chr20	47656911	47786586	chr20:47656911-47786586	3	-	47658361	47757363	789624	21	1481,54,34,124,143,170,60,95,97,229,196,130,57,129,176,151,170,152,240,275,752,	0,2487,2785,4861,6158,6541,7218,8287,8945,9348,15286,19582,20166,21764,26082,27519,33214,45607,79791,100277,128923,
#Deleted in new
chr20	47657405	47659730	chr20:47657405-47659730	0	-	47657405	47657405	8553170	2	987,332,	0,1993,
#Partially deleted in new
chr20	47657405	47786616	chr20:47657405-47786616	1	-	47658361	47757363	789624	21	987,54,34,124,143,170,60,95,97,229,196,130,57,129,176,151,170,152,240,275,569,	0,1993,2291,4367,5664,6047,6724,7793,8451,8854,14792,19088,19672,21270,25588,27025,32720,45113,79297,99783,128642,
#Partially deleted in new
chr20	47657434	47665259	chr20:47657434-47665259	0	-	47658361	47665259	789624	7	958,34,124,143,170,60,61,	0,2262,4338,5635,6018,6695,7764,
#Partially deleted in new
chr20	47657667	47786554	chr20:47657667-47786554	1	-	47658361	47757363	789624	21	725,54,25,124,143,170,60,95,97,229,196,130,57,129,176,151,170,152,240,275,507,	0,1731,2029,4105,5402,5785,6462,7531,8189,8592,14530,18826,19410,21008,25326,26763,32458,44851,79035,99521,128380,
#Deleted in new
chr20	47661433	47663554	chr20:47661433-47663554	0	-	47661433	47661433	8553170	4	183,124,143,102,	0,339,1636,2019,
#Partially deleted in new
chr20	47672194	47676692	chr20:47672194-47676692	0	-	47672194	47672194	8553170	2	199,199,	0,4299,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	47677900	47686297	chr20:47677900-47686297	3	+	47677900	47677900	8553170	4	372,3,106,1956,	0,630,730,6441,
#Partially deleted in new
chr20	47684513	47757331	chr20:47684513-47757331	0	-	47684513	47684513	8553170	3	68,152,143,	0,18005,72675,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	47689547	47786054	chr20:47689547-47786054	0	-	47689547	47689547	8553170	5	748,152,240,275,220,	0,12971,47155,67641,96287,
#Partially deleted in new
chr20	47702518	47785489	chr20:47702518-47785489	0	-	47702518	47757363	789624	4	152,240,275,147,	0,34184,54670,82824,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	47706512	47736943	chr20:47706512-47736943	0	-	47706512	47706512	8553170	2	391,241,	0,30190,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	47826968	47827044	chr20:47826968-47827044	3	-	47826968	47826968	8553170	1	76,	0,
#Deleted in new
chr20	47859787	47860672	chr20:47859787-47860672	7	+	47859787	47859787	16724991	1	885,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	47873190	47873273	chr20:47873190-47873273	7	+	47873190	47873190	16724991	1	83,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	47904347	47904423	chr20:47904347-47904423	3	+	47904347	47904347	8553170	1	76,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	47950798	47952055	chr20:47950798-47952055	3	+	47950798	47950798	8553170	2	126,299,	0,958,
#Deleted in new
chr20	47958021	47958603	chr20:47958021-47958603	3	+	47958021	47958021	8553170	2	115,341,	0,241,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	47980487	47988744	chr20:47980487-47988744	3	-	47980487	47980487	8553170	2	291,138,	0,8119,
#Deleted in new
chr20	47983403	47984313	chr20:47983403-47984313	3	+	47983403	47983403	789624	2	118,332,	0,578,
#Deleted in new
chr20	48073868	48074188	chr20:48073868-48074188	3	+	48073868	48073868	8553170	1	320,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	48359949	48370629	chr20:48359949-48370629	3	+	48359949	48359949	789624	5	201,309,160,324,2550,	0,4939,6524,6786,8130,
#Deleted in new
chr20	48360011	48360904	chr20:48360011-48360904	0	+	48360011	48360011	8553170	2	139,299,	0,594,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	48364888	48370629	chr20:48364888-48370629	0	+	48364888	48364888	8553170	4	309,160,324,2550,	0,1585,1847,3191,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	48365646	48370629	chr20:48365646-48370629	0	+	48365646	48365646	8553170	3	361,160,2550,	0,827,2433,
#Deleted in new
chr20	48383322	48384895	chr20:48383322-48384895	3	-	48383322	48383322	8553170	2	148,256,	0,1317,
#Partially deleted in new
chr20	48407366	48410716	chr20:48407366-48410716	3	+	48407366	48407366	8553170	3	38,10,270,	0,2202,3080,
#Deleted in new
chr20	48471307	48472414	chr20:48471307-48472414	3	+	48471307	48471307	8553170	2	179,463,	0,644,
#Deleted in new
chr20	48476998	48477553	chr20:48476998-48477553	3	+	48476998	48476998	8553170	1	555,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	48494233	48494309	chr20:48494233-48494309	3	-	48494233	48494233	8553170	1	76,	0,
#Partially deleted in new
chr20	48624251	48827883	chr20:48624251-48827883	3	-	48625884	48827860	0	40	1676,68,103,173,67,115,144,100,221,42,129,91,83,89,207,277,211,162,188,121,137,86,149,93,143,73,76,50,104,101,148,150,119,134,162,102,105,123,72,242,	0,3296,3609,5197,6476,8025,8244,10424,12211,13459,15514,17916,18155,20157,21599,25048,25744,26642,27144,28334,29109,31038,32788,33884,35667,42031,51941,55108,55399,56983,64405,66695,68420,76501,84008,102038,110294,120773,123557,203390,
#Partially deleted in new
chr20	48624251	48657127	chr20:48624251-48657127	0	-	48630738	48657127	789624	22	1676,68,103,173,67,363,100,221,42,129,91,83,89,207,277,211,162,188,121,137,86,88,	0,3296,3609,5197,6476,8025,10424,12211,13459,15514,17916,18155,20157,21599,25048,25744,26642,27144,28334,29109,31038,32788,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	48642112	48642738	chr20:48642112-48642738	0	-	48642112	48642112	8553170	2	146,332,	0,294,
#Deleted in new
chr20	48692322	48692684	chr20:48692322-48692684	0	-	48692645	48692684	789624	1	362,	0,
#Partially deleted in new
chr20	48821687	48849458	chr20:48821687-48849458	3	-	48821687	48821687	8553170	2	342,24,	0,27747,
#Partially deleted in new
chr20	48921889	49036693	chr20:48921889-49036693	3	+	48921889	49033199	0	39	121,31,124,147,180,235,69,152,131,235,100,140,109,184,112,206,85,172,152,129,159,148,100,41,170,152,173,161,131,130,136,139,55,115,131,169,139,118,3671,	0,19309,19974,29433,30815,31666,41940,43982,47257,49230,50436,51255,52876,54126,62839,63518,66414,66601,67395,67666,69150,72561,73893,76303,76446,83180,88342,90034,91674,91941,94390,95359,95606,96994,101161,103423,106640,110159,111133,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	48998099	48998446	chr20:48998099-48998446	0	+	48998099	48998099	8553170	2	134,111,	0,236,
#Deleted in new
chr20	49038356	49038602	chr20:49038356-49038602	7	-	49038356	49038356	16724991	1	246,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	49040462	49046044	chr20:49040462-49046044	3	-	49040462	49040462	789624	3	148,223,185,	0,2687,5397,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	49040462	49046044	chr20:49040462-49046044	0	-	49040462	49040462	789624	2	148,185,	0,5397,
#Partially deleted in new
chr20	49046245	49096960	chr20:49046245-49096960	1	+	49058463	49096438	789624	24	178,96,143,102,146,91,108,93,130,66,203,85,62,137,104,98,151,209,98,86,82,147,232,612,	0,12207,16956,19946,20119,20944,22469,23959,26322,28539,29072,30734,32315,37780,39037,41763,43001,43292,44496,44691,45800,47894,48486,50103,
#Partially deleted in new
chr20	49046311	49096952	chr20:49046311-49096952	3	+	49058463	49096438	789624	25	112,96,143,102,146,91,108,93,168,130,66,203,85,62,137,104,98,151,209,98,86,82,147,232,604,	0,12141,16890,19880,20053,20878,22403,23893,25974,26256,28473,29006,30668,32249,37714,38971,41697,42935,43226,44430,44625,45734,47828,48420,50037,
#Partially deleted in new
chr20	49090762	49096952	chr20:49090762-49096952	0	+	49090762	49090762	8553170	6	77,86,82,147,232,777,	0,174,1283,3377,3969,5413,
#Partially deleted in new
chr20	49113338	49188367	chr20:49113338-49188367	3	-	49114877	49166201	0	14	1555,86,123,320,76,147,144,213,99,166,139,289,75,252,	0,2443,3787,4438,4994,6643,9753,11036,22494,38243,40594,52658,60856,74777,
#Partially deleted in new
chr20	49113340	49188367	chr20:49113340-49188367	1	-	49114877	49154033	0	13	1553,86,123,320,76,147,144,231,99,166,139,75,252,	0,2441,3785,4436,4992,6641,9751,11034,22492,38241,40592,60854,74775,
#Partially deleted in new
chr20	49113340	49154068	chr20:49113340-49154068	1	-	49114877	49154033	789624	15	1553,86,123,320,7,18,44,31,6,108,144,213,99,166,136,	0,2441,3785,4436,4992,5001,5024,6641,6673,6680,9751,11034,22492,38241,40592,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	49113522	49188367	chr20:49113522-49188367	1	-	49114877	49154033	0	14	1371,86,123,320,76,147,144,213,99,166,139,75,123,252,	0,2259,3603,4254,4810,6459,9569,10852,22310,38059,40410,60672,65599,74593,
#Partially deleted in new
chr20	49113522	49188367	chr20:49113522-49188367	1	-	49114877	49154033	0	12	1371,86,123,320,76,147,144,213,99,166,139,252,	0,2259,3603,4254,4810,6459,9569,10852,22310,38059,40410,74593,
#Partially deleted in new
chr20	49113522	49188367	chr20:49113522-49188367	1	-	49114877	49154033	0	13	1371,86,123,320,76,147,144,213,99,166,139,75,252,	0,2259,3603,4254,4810,6459,9569,10852,22310,38059,40410,60672,74593,
#Partially deleted in new
chr20	49113522	49188367	chr20:49113522-49188367	1	-	49114877	49154033	789624	12	1371,86,123,320,76,147,138,213,99,166,139,252,	0,2259,3603,4254,4810,6459,9569,10852,22310,38059,40410,74593,
#Partially deleted in new
chr20	49113522	49188367	chr20:49113522-49188367	1	-	49114877	49154033	0	12	1371,86,123,320,76,147,144,231,99,166,139,252,	0,2259,3603,4254,4810,6459,9569,10852,22310,38059,40410,74593,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	49124374	49188367	chr20:49124374-49188367	0	-	49124374	49154033	789624	7	231,99,166,139,75,123,252,	0,11458,27207,29558,49820,54747,63741,
#Deleted in new
chr20	49134479	49135012	chr20:49134479-49135012	7	+	49134479	49134479	16724991	1	533,	0,
#Partially deleted in new
chr20	49151581	49174263	chr20:49151581-49174263	0	-	49151581	49158959	789624	5	166,139,61,208,69,	0,2351,6855,7357,22613,
#Partially deleted in new
chr20	49219294	49244075	chr20:49219294-49244075	3	+	49219355	49243834	789624	21	247,147,60,166,47,87,106,174,151,100,142,154,82,178,107,103,95,124,88,75,260,	0,2157,3662,3973,5650,5818,7135,9420,10904,14011,14273,15640,16855,17038,19654,19941,22598,22788,23299,24334,24521,
#Partially deleted in new
chr20	49219346	49244077	chr20:49219346-49244077	1	+	49219355	49243834	789624	21	195,147,60,166,47,87,106,174,151,100,142,154,82,178,107,103,95,124,88,75,262,	0,2105,3610,3921,5598,5766,7083,9368,10852,13959,14221,15588,16803,16986,19602,19889,22546,22736,23247,24282,24469,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr20	49219346	49244077	chr20:49219346-49244077	0	+	49219346	49219346	8553170	19	195,147,60,166,47,87,106,174,151,100,2664,178,107,103,95,124,88,75,262,	0,2105,3610,3921,5598,5766,7083,9368,10852,13959,14221,16986,19602,19889,22546,22736,23247,24282,24469,
#Partially deleted in new
chr20	49219415	49244070	chr20:49219415-49244070	1	+	49219448	49243834	789624	21	126,147,60,166,47,87,106,174,151,100,142,154,82,178,107,103,95,124,88,75,255,	0,2036,3541,3852,5529,5697,7014,9299,10783,13890,14152,15519,16734,16917,19533,19820,22477,22667,23178,24213,24400,
#Partially deleted in new
chr20	49219431	49226466	chr20:49219431-49226466	0	+	49219448	49224818	789624	7	110,147,60,166,217,87,37,	0,2020,3525,3836,5343,5681,6998,
#Partially deleted in new
chr20	49224953	49233643	chr20:49224953-49233643	0	+	49224953	49233643	789624	8	38,87,106,174,151,93,100,76,	0,159,1476,3761,5245,6069,8352,8614,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	49233837	49244077	chr20:49233837-49244077	0	+	49233837	49233837	8553170	7	2673,107,103,95,124,88,449,	0,5111,5398,8055,8245,8756,9791,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr20	49237945	49278426	chr20:49237945-49278426	1	-	49238913	49275839	789624	15	1355,114,96,111,146,155,140,248,115,150,149,132,1809,109,406,	0,3864,13581,14774,15720,16549,17862,19471,22517,25388,26770,28189,31996,37833,40075,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	49238942	49244752	chr20:49238942-49244752	0	-	49238942	49238942	8553170	3	358,114,168,	0,2867,5642,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	49245896	49278065	chr20:49245896-49278065	1	-	49247266	49275839	789624	14	3815,96,111,146,155,140,248,115,150,149,132,1809,101,45,	0,5630,6823,7769,8598,9911,11520,14566,17437,18819,20238,24045,29882,32124,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	49245899	49278219	chr20:49245899-49278219	3	-	49247266	49275839	789624	14	3812,96,111,146,155,140,248,115,150,149,132,1809,109,199,	0,5627,6820,7766,8595,9908,11517,14563,17434,18816,20235,24042,29879,32121,
#Partially deleted in new
chr20	49255807	49278041	chr20:49255807-49278041	0	-	49255807	49275839	789624	9	140,248,115,150,149,132,1809,109,112,	0,1609,4655,7526,8908,10327,14134,19971,22122,
#Partially deleted in new
chr20	49255932	49271223	chr20:49255932-49271223	0	-	49255932	49271223	789624	7	46,248,115,150,149,132,1282,	0,1484,4530,7401,8783,10202,14009,
#Partially deleted in new
chr20	49278177	49289260	chr20:49278177-49289260	0	+	49278177	49278177	789624	5	539,105,86,62,216,	0,926,2307,2725,10867,
#Partially deleted in new
chr20	49278177	49289260	chr20:49278177-49289260	0	+	49278177	49278177	789624	3	539,105,216,	0,926,10867,
#Partially deleted in new
chr20	49278177	49289260	chr20:49278177-49289260	0	+	49278177	49278177	789624	4	539,105,86,216,	0,926,2307,10867,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	49278177	49289260	chr20:49278177-49289260	3	+	49278177	49278177	8553170	6	539,105,86,62,67,216,	0,926,2307,2725,3574,10867,
#Partially deleted in new
chr20	49278270	49289260	chr20:49278270-49289260	0	+	49278270	49278270	789624	5	127,105,86,62,216,	0,833,2214,2632,10774,
#Deleted in new
chr20	49278426	49278624	chr20:49278426-49278624	3	+	49278426	49278426	8553170	1	198,	0,
#Partially deleted in new
chr20	49278641	49289260	chr20:49278641-49289260	0	+	49278641	49278641	789624	4	97,105,86,216,	0,462,1843,10403,
#Partially deleted in new
chr20	49278641	49289260	chr20:49278641-49289260	0	+	49278641	49278641	8553170	5	97,105,86,62,216,	0,462,1843,2261,10403,
#Partially deleted in new
chr20	49278653	49295594	chr20:49278653-49295594	0	+	49278653	49278653	8553170	5	63,105,86,62,192,	0,450,1831,2249,16749,
#Deleted in new
chr20	49278939	49279028	chr20:49278939-49279028	3	+	49278939	49278939	789624	1	89,	0,
#Deleted in new
chr20	49279115	49279208	chr20:49279115-49279208	3	+	49279115	49279115	8553170	1	93,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	49279173	49281181	chr20:49279173-49281181	1	+	49279173	49279173	8553170	2	35,697,	0,1311,
#Deleted in new
chr20	49280318	49280409	chr20:49280318-49280409	3	+	49280318	49280318	789624	1	91,	0,
#Deleted in new
chr20	49280484	49280571	chr20:49280484-49280571	3	+	49280484	49280484	8553170	1	87,	0,
#Deleted in new
chr20	49280682	49280772	chr20:49280682-49280772	3	+	49280682	49280682	789624	1	90,	0,
#Partially deleted in new
chr20	49290887	49295738	chr20:49290887-49295738	1	+	49290887	49290887	8553170	2	261,336,	0,4515,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	49293393	49372950	chr20:49293393-49372950	0	-	49293393	49293393	8553170	2	4721,610,	0,78947,
#Partially deleted in new
chr20	49298106	49482009	chr20:49298106-49482009	0	-	49299350	49482009	789624	3	8,69,96,	0,1208,183807,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	49310512	49373103	chr20:49310512-49373103	0	-	49372982	49373103	789624	2	287,763,	0,61828,
#Partially deleted in new
chr20	49318336	49340437	chr20:49318336-49340437	5	+	49318336	49318336	16724991	5	249,189,79,177,118,	0,10156,13609,17183,21983,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	49318474	49441654	chr20:49318474-49441654	7	+	49318474	49318474	16724991	8	127,79,161,167,81,116,93,864,	0,13471,104617,105928,106626,108177,120113,122316,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	49318485	49370654	chr20:49318485-49370654	4	+	49318485	49318485	16724991	6	116,131,27,76,79,153,	0,11046,12218,12894,13460,52016,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	49318534	49371908	chr20:49318534-49371908	4	+	49318534	49318534	16724991	4	67,76,79,1407,	0,12845,13411,51967,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	49363876	49482676	chr20:49363876-49482676	3	-	49372982	49482480	789624	2	11116,763,	0,118037,
#Partially deleted in new
chr20	49371967	49484297	chr20:49371967-49484297	1	-	49372982	49482480	789624	3	3025,733,356,	0,109946,111974,
#Partially deleted in new
chr20	49374799	49387005	chr20:49374799-49387005	0	-	49374799	49374799	8553170	2	193,143,	0,12063,
#Partially deleted in new
chr20	49451332	49482000	chr20:49451332-49482000	0	-	49451332	49451332	8553170	2	85,87,	0,30581,
#Partially deleted in new
chr20	49476360	49482000	chr20:49476360-49482000	0	-	49476360	49476360	8553170	2	99,87,	0,5553,
#Deleted in new
chr20	49482570	49483334	chr20:49482570-49483334	0	-	49482570	49482570	8553170	2	76,94,	0,670,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	49503873	49568146	chr20:49503873-49568146	3	-	49507919	49568116	0	10	4191,152,182,169,182,152,144,179,124,104,	0,7154,9206,10353,20184,35696,40431,43967,46192,64169,
#Partially deleted in new
chr20	49507900	49568116	chr20:49507900-49568116	0	-	49507900	49507900	8553170	9	164,152,182,169,182,152,144,124,74,	0,3127,5179,6326,16157,31669,36404,42165,60142,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	49632944	49713878	chr20:49632944-49713878	3	-	49636311	49713690	789624	9	3515,102,123,188,117,125,114,135,303,	0,4396,6733,7533,9523,10581,14020,23623,80631,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	49721948	49722247	chr20:49721948-49722247	3	+	49721948	49721948	8553170	1	299,	0,
#Partially deleted in new
chr20	49729590	49729842	chr20:49729590-49729842	7	-	49729590	49729590	16724991	1	252,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	49794810	49794914	chr20:49794810-49794914	3	+	49794810	49794810	8553170	1	104,	0,
#Partially deleted in new
chr20	49812712	49892241	chr20:49812712-49892241	1	+	49812922	49887936	789624	16	236,182,81,59,84,102,83,144,139,106,117,83,112,221,147,4413,	0,2295,10348,26828,32323,36866,38049,42725,50216,52026,61992,65268,68211,71133,74039,75116,
#Partially deleted in new
chr20	49812880	49892242	chr20:49812880-49892242	3	+	49812922	49887936	789624	16	68,182,81,59,84,102,35,144,139,106,117,83,112,221,147,4414,	0,2127,10180,26660,32155,36698,37929,42557,50048,51858,61824,65100,68043,70965,73871,74948,
#Partially deleted in new
chr20	49812893	49815444	chr20:49812893-49815444	0	+	49812893	49812893	8553170	2	55,437,	0,2114,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	49829124	49831085	chr20:49829124-49831085	7	+	49829124	49829124	16724991	2	114,1539,	0,422,
#Deleted in new
chr20	49886370	49892242	chr20:49886370-49892242	0	+	49886370	49886370	8553170	2	528,4414,	0,1458,
#Partially deleted in new
chr20	49903390	49915508	chr20:49903390-49915508	3	-	49905618	49908490	0	3	3455,438,129,	0,4764,11989,
#Partially deleted in new
chr20	49903393	49913739	chr20:49903393-49913739	1	-	49905618	49908490	0	3	3452,438,248,	0,4761,10098,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	49920596	49920694	chr20:49920596-49920694	3	-	49920596	49920596	8553170	1	98,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	49932794	49933078	chr20:49932794-49933078	3	+	49932794	49932794	8553170	1	284,	0,
#Partially deleted in new
chr20	49936335	49952152	chr20:49936335-49952152	0	+	49936412	49945454	789624	5	217,107,115,108,77,	0,9046,9800,12912,15740,
#Partially deleted in new
chr20	49936347	49953892	chr20:49936347-49953892	3	+	49936412	49952141	789624	6	205,151,107,115,108,1817,	0,5213,9034,9788,12900,15728,
#Partially deleted in new
chr20	49936376	49953878	chr20:49936376-49953878	0	+	49936412	49941592	789624	6	176,129,107,115,108,1803,	0,5206,9005,9759,12871,15699,
#Partially deleted in new
chr20	49936398	49946178	chr20:49936398-49946178	0	+	49936412	49941218	789624	5	154,114,151,107,43,	0,4708,5162,8983,9737,
#Partially deleted in new
chr20	49936398	49941971	chr20:49936398-49941971	0	+	49936398	49936398	8553170	2	154,411,	0,5162,
#Partially deleted in new
chr20	49936398	49952128	chr20:49936398-49952128	0	+	49936412	49952128	789624	5	154,151,107,115,53,	0,5162,8983,9737,15677,
#Partially deleted in new
chr20	49936406	49952899	chr20:49936406-49952899	1	+	49936412	49952242	789624	5	146,151,107,119,761,	0,5154,8975,9729,15732,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	49943930	49952300	chr20:49943930-49952300	0	+	49943930	49943930	8553170	4	1558,115,108,225,	0,2205,5317,8145,
#Deleted in new
chr20	49956744	49958032	chr20:49956744-49958032	7	+	49956744	49956744	16724991	1	1288,	0,
#Partially deleted in new
chr20	49982998	49988886	chr20:49982998-49988886	3	+	49983059	49988056	0	3	143,528,1015,	0,825,4873,
#Deleted in new
chr20	50040715	50041504	chr20:50040715-50041504	3	-	50040715	50040715	789624	2	334,128,	0,661,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	50081123	50115954	chr20:50081123-50115954	1	-	50082767	50115575	0	4	1791,126,149,470,	0,3005,15548,34361,
#Partially deleted in new
chr20	50081123	50153637	chr20:50081123-50153637	3	-	50082767	50153637	789624	8	1791,126,149,213,145,92,120,121,	0,3005,15548,46851,48422,49732,62378,72393,
#Partially deleted in new
chr20	50081123	50113139	chr20:50081123-50113139	1	-	50082767	50113128	0	3	1791,149,33,	0,15548,31983,
#Partially deleted in new
chr20	50081123	50113173	chr20:50081123-50113173	3	-	50082767	50113128	0	4	1791,126,149,67,	0,3005,15548,31983,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	50081123	50115954	chr20:50081123-50115954	1	-	50082767	50115575	0	5	1791,126,149,137,256,	0,3005,15548,34361,34575,
#Partially deleted in new
chr20	50081123	50113172	chr20:50081123-50113172	0	-	50081123	50081123	789624	3	1791,126,66,	0,3005,31983,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	50081123	50115954	chr20:50081123-50115954	1	-	50082767	50115523	0	3	1791,126,470,	0,3005,34361,
#Partially deleted in new
chr20	50081123	50084751	chr20:50081123-50084751	1	-	50082767	50084751	789624	5	1791,126,5,23,11,	0,3005,3256,3360,3617,
#Partially deleted in new
chr20	50081123	50113198	chr20:50081123-50113198	1	-	50082767	50096716	789624	5	1791,126,149,100,92,	0,3005,15548,17758,31983,
#Partially deleted in new
chr20	50081123	50113198	chr20:50081123-50113198	1	-	50082767	50096716	789624	5	1791,126,149,274,92,	0,3005,15548,30165,31983,
#Partially deleted in new
chr20	50081123	50113198	chr20:50081123-50113198	1	-	50082767	50096716	789624	5	1791,126,149,139,92,	0,3005,15548,27849,31983,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	50082559	50115957	chr20:50082559-50115957	0	-	50096504	50115575	789624	5	355,126,52,149,473,	0,1569,13923,14112,32925,
#Partially deleted in new
chr20	50082767	50115954	chr20:50082767-50115954	0	-	50082767	50082767	8553170	4	147,126,137,125,	0,1361,32717,33062,
#Partially deleted in new
chr20	50082795	50113136	chr20:50082795-50113136	0	-	50082795	50082795	8553170	5	119,126,149,139,30,	0,1333,13876,26177,30311,
#Partially deleted in new
chr20	50082856	50113133	chr20:50082856-50113133	0	-	50082856	50082856	8553170	4	58,126,338,27,	0,1272,13626,30250,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	50083731	50113146	chr20:50083731-50113146	0	-	50083731	50083731	8553170	2	523,40,	0,29375,
#Partially deleted in new
chr20	50083877	50113146	chr20:50083877-50113146	0	-	50083877	50083877	8553170	3	377,149,40,	0,12794,29229,
#Partially deleted in new
chr20	50084126	50113167	chr20:50084126-50113167	0	-	50084126	50084126	8553170	4	128,149,83,61,	0,12545,14755,28980,
#Partially deleted in new
chr20	50084147	50113145	chr20:50084147-50113145	0	-	50084147	50084147	8553170	4	107,149,274,39,	0,12524,27141,28959,
#Partially deleted in new
chr20	50094914	50113165	chr20:50094914-50113165	0	-	50094914	50094914	8553170	4	468,52,149,59,	0,1568,1757,18192,
#Partially deleted in new
chr20	50094943	50113146	chr20:50094943-50113146	0	-	50094943	50094943	8553170	3	439,149,40,	0,1728,18163,
#Partially deleted in new
chr20	50095789	50113125	chr20:50095789-50113125	0	-	50095789	50095789	8553170	3	481,149,19,	0,882,17317,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	50095789	50115949	chr20:50095789-50115949	0	-	50095789	50095789	8553170	3	481,149,465,	0,882,19695,
#Partially deleted in new
chr20	50096058	50111566	chr20:50096058-50111566	0	-	50096058	50096058	8553170	3	212,149,278,	0,613,15230,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	50118253	50153734	chr20:50118253-50153734	3	-	50125057	50153637	789624	6	6926,213,145,92,120,218,	0,9721,11292,12602,25248,35263,
#Partially deleted in new
chr20	50123736	50153734	chr20:50123736-50153734	1	-	50125057	50153637	789624	6	1443,213,145,83,120,218,	0,4238,5809,7128,19765,29780,
#Partially deleted in new
chr20	50123769	50131132	chr20:50123769-50131132	1	-	50125057	50131035	789624	5	1410,213,145,92,113,	0,4205,5776,7086,7250,
#Partially deleted in new
chr20	50124043	50153734	chr20:50124043-50153734	0	-	50151298	50153637	789624	7	1136,213,145,92,120,104,218,	0,3931,5502,6812,19458,27168,29473,
#Partially deleted in new
chr20	50124968	50153640	chr20:50124968-50153640	0	-	50129655	50153637	789624	5	211,213,145,120,124,	0,3006,4577,18533,28548,
#Partially deleted in new
chr20	50162764	50166101	chr20:50162764-50166101	3	-	50162764	50162764	8553170	2	331,72,	0,3265,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	50163463	50166102	chr20:50163463-50166102	1	-	50163463	50163463	8553170	2	660,73,	0,2566,
#Partially deleted in new
chr20	50166361	50169495	chr20:50166361-50169495	3	+	50166361	50166361	8553170	2	275,150,	0,2984,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	50172549	50173370	chr20:50172549-50173370	0	+	50172549	50172549	8553170	3	239,95,169,	0,373,652,
#Partially deleted in new
chr20	50172589	50176671	chr20:50172589-50176671	3	+	50172589	50172589	789624	3	199,95,391,	0,333,3691,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	50184597	50191498	chr20:50184597-50191498	3	-	50184597	50184597	789624	6	1823,115,85,106,288,231,	0,2415,3945,4858,5400,6670,
#Deleted in new
chr20	50190733	50192689	chr20:50190733-50192689	3	+	50191033	50192071	0	1	1956,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	50267485	50279795	chr20:50267485-50279795	3	+	50267485	50267485	8553170	4	178,90,123,1619,	0,8160,10005,10691,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	50267498	50278427	chr20:50267498-50278427	0	+	50267498	50267498	8553170	3	165,123,251,	0,9992,10678,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	50275669	50279795	chr20:50275669-50279795	0	+	50275669	50275669	8553170	3	66,123,1619,	0,1821,2507,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	50276316	50279037	chr20:50276316-50279037	0	+	50276316	50276316	8553170	3	74,123,861,	0,1174,1860,
#Partially deleted in new
chr20	50277533	50278415	chr20:50277533-50278415	0	+	50277533	50277533	8553170	2	447,239,	0,643,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	50292719	50314922	chr20:50292719-50314922	3	+	50292719	50292719	5263520	5	111,258,210,79,1623,	0,5436,19085,19632,20580,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	50310710	50321342	chr20:50310710-50321342	3	-	50310710	50310710	789624	3	539,1443,268,	0,2203,10364,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	50310973	50312014	chr20:50310973-50312014	1	+	50310973	50310973	8553170	2	733,210,	0,831,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	50429189	50429483	chr20:50429189-50429483	3	-	50429189	50429189	8553170	1	294,	0,
#Partially deleted in new
chr20	50479766	50479991	chr20:50479766-50479991	7	+	50479766	50479766	16724991	1	225,	0,
#Partially deleted in new
chr20	50510320	50584760	chr20:50510320-50584760	1	+	50565033	50582715	789624	9	270,101,99,138,210,162,224,196,2069,	0,54648,58059,64196,68099,68847,69382,70944,72371,
#Partially deleted in new
chr20	50510353	50585241	chr20:50510353-50585241	3	+	50510527	50582715	0	10	237,91,101,99,138,210,162,224,196,2550,	0,51009,54615,58026,64163,68066,68814,69349,70911,72338,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	50557681	50557998	chr20:50557681-50557998	3	-	50557681	50557681	8553170	1	317,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	50563008	50563110	chr20:50563008-50563110	3	+	50563008	50563008	8553170	1	102,	0,
#Partially deleted in new
chr20	50570974	50578041	chr20:50570974-50578041	3	-	50570974	50570974	8553170	2	4039,548,	0,6519,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	50585785	50585879	chr20:50585785-50585879	3	+	50585785	50585785	5263520	1	94,	0,
#Partially deleted in new
chr20	50586107	50691528	chr20:50586107-50691528	3	-	50587231	50630847	789624	22	1225,91,84,203,162,162,136,124,131,573,130,146,126,44,64,150,54,24,79,147,119,403,	0,1694,3578,6236,6927,8445,9261,10032,11472,15964,18537,22281,22505,22804,23185,23465,24745,25073,29894,33878,44630,105018,
#Partially deleted in new
chr20	50586111	50636889	chr20:50586111-50636889	1	-	50587231	50630847	789624	22	1221,91,84,203,162,162,136,124,131,573,130,146,126,44,64,150,54,24,79,147,119,309,	0,1690,3574,6232,6923,8441,9257,10028,11468,15960,18533,22277,22501,22800,23181,23461,24741,25069,29890,33874,44626,50469,
#Partially deleted in new
chr20	50586664	50590012	chr20:50586664-50590012	0	-	50586664	50586664	8553170	3	668,91,327,	0,1137,3021,
#Partially deleted in new
chr20	50589716	50597609	chr20:50589716-50597609	0	-	50589716	50589716	8553170	7	53,203,162,245,136,124,30,	0,2627,3318,4836,5652,6423,7863,
#Partially deleted in new
chr20	50592537	50595192	chr20:50592537-50595192	0	-	50592537	50592537	8553170	3	9,162,640,	0,497,2015,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	50596977	50636889	chr20:50596977-50636889	0	-	50596977	50596977	8553170	14	733,573,130,146,126,44,64,150,54,24,79,147,119,309,	0,5094,7667,11411,11635,11934,12315,12595,13875,14203,19024,23008,33760,39603,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	50614635	50614785	chr20:50614635-50614785	3	-	50614635	50614635	5263520	1	150,	0,
#Deleted in new
chr20	50620762	50621077	chr20:50620762-50621077	7	+	50620762	50620762	16724991	1	315,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	50645470	50660291	chr20:50645470-50660291	3	+	50645470	50645470	789624	3	23,189,426,	0,227,14395,
#Partially deleted in new
chr20	50653201	50662275	chr20:50653201-50662275	1	+	50653201	50653201	8553170	4	21,50,213,255,	0,744,6664,8819,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	50731543	50753741	chr20:50731543-50753741	3	+	50731786	50750488	789624	3	309,223,4083,	0,6313,18115,
#Partially deleted in new
chr20	50731664	50756795	chr20:50731664-50756795	1	+	50731786	50756743	789624	3	188,223,111,	0,6192,25020,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	50794893	50877177	chr20:50794893-50877177	1	+	50794993	50876535	789624	6	280,72,102,135,97,692,	0,23317,35385,46872,81103,81592,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	50794993	50882676	chr20:50794993-50882676	3	+	50794993	50876608	789624	5	180,72,102,135,6191,	0,23217,35285,46772,81492,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	50795030	50876723	chr20:50795030-50876723	1	+	50795083	50876535	789624	6	143,72,102,135,97,238,	0,23180,35248,46735,80966,81455,
#Partially deleted in new
chr20	50795069	50876572	chr20:50795069-50876572	0	+	50795083	50876572	789624	4	104,72,102,87,	0,23141,35209,81416,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	50795070	50877177	chr20:50795070-50877177	0	+	50795083	50840542	789624	6	103,72,102,394,135,692,	0,23140,35208,45466,46695,81415,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	50795099	50833020	chr20:50795099-50833020	0	+	50795099	50795099	8553170	4	74,72,102,312,	0,23111,35179,37609,
#Partially deleted in new
chr20	50840614	50840749	chr20:50840614-50840749	7	-	50840614	50840614	16724991	1	135,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	50888915	50905558	chr20:50888915-50905558	1	-	50891404	50903996	789624	3	5597,93,1670,	0,13101,14973,
#Partially deleted in new
chr20	50888918	50930990	chr20:50888918-50930990	1	-	50891404	50903996	789624	6	5594,93,113,84,175,165,	0,13098,14970,15847,39732,41907,
#Partially deleted in new
chr20	50889047	50931375	chr20:50889047-50931375	3	-	50891404	50903996	789624	5	5465,93,113,175,550,	0,12969,14841,39603,41778,
#Partially deleted in new
chr20	50889047	50928732	chr20:50889047-50928732	1	-	50889822	50903996	789624	4	910,93,113,82,	0,12969,14841,39603,
#Partially deleted in new
chr20	50890335	50931421	chr20:50890335-50931421	1	-	50891404	50903996	789624	4	4177,93,113,596,	0,11681,13553,40490,
#Partially deleted in new
chr20	50890348	50909791	chr20:50890348-50909791	1	-	50891404	50903996	789624	4	4164,93,113,292,	0,11668,13540,19151,
#Partially deleted in new
chr20	50890371	50931364	chr20:50890371-50931364	1	-	50891404	50894029	789624	3	4141,93,539,	0,11645,40454,
#Partially deleted in new
chr20	50894062	50928735	chr20:50894062-50928735	0	-	50894062	50928735	789624	3	450,93,85,	0,7954,34588,
#Partially deleted in new
chr20	50894195	50928816	chr20:50894195-50928816	0	-	50894195	50903996	789624	5	317,93,113,84,166,	0,7821,9693,10570,34455,
#Deleted in new
chr20	50913730	50914411	chr20:50913730-50914411	7	+	50913730	50913730	16724991	1	681,	0,
#Partially deleted in new
chr20	50930983	50945134	chr20:50930983-50945134	3	+	50930983	50930983	789624	3	71,78,778,	0,388,13373,
#Partially deleted in new
chr20	50931027	50944717	chr20:50931027-50944717	0	+	50931027	50931027	8553170	3	27,75,361,	0,347,13329,
#Partially deleted in new
chr20	50934866	50958550	chr20:50934866-50958550	3	-	50935131	50958523	789624	9	370,115,69,96,26,77,34,100,188,	0,1281,5998,7164,10870,10980,13762,20319,23496,
#Partially deleted in new
chr20	50934866	50958550	chr20:50934866-50958550	0	-	50934866	50934866	789624	9	370,115,91,96,26,77,34,100,188,	0,1281,5998,7164,10870,10980,13762,20319,23496,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	50934895	50945861	chr20:50934895-50945861	0	-	50934895	50934895	8553170	7	341,115,91,105,96,26,15,	0,1252,5969,6209,7135,10841,10951,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	50934944	50958521	chr20:50934944-50958521	0	-	50935131	50958521	789624	10	292,115,69,105,96,26,77,34,100,159,	0,1203,5920,6160,7086,10792,10902,13684,20241,23418,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	50958825	50963931	chr20:50958825-50963931	3	+	50958842	50960225	0	1	5106,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	50999369	51010019	chr20:50999369-51010019	3	+	50999369	50999369	8553170	3	110,258,434,	0,1140,10216,
#Partially deleted in new
chr20	51003655	51023129	chr20:51003655-51023129	3	-	51004038	51010338	789624	3	1151,800,260,	0,5909,19214,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	51003656	51008040	chr20:51003656-51008040	0	-	51003656	51003656	8553170	2	3617,105,	0,4279,
#Partially deleted in new
chr20	51009564	51023107	chr20:51009564-51023107	0	-	51009564	51010338	789624	3	800,58,238,	0,2794,13305,
#Partially deleted in new
chr20	51009796	51023094	chr20:51009796-51023094	0	-	51009796	51010338	789624	4	568,58,116,225,	0,2562,3932,13073,
#Partially deleted in new
chr20	51010048	51023081	chr20:51010048-51023081	0	-	51010048	51010338	789624	3	316,58,428,	0,2310,12605,
#Partially deleted in new
chr20	51010194	51014108	chr20:51010194-51014108	0	-	51010194	51010338	789624	3	170,58,380,	0,2164,3534,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	51098137	51098845	chr20:51098137-51098845	3	+	51098137	51098137	8553170	1	708,	0,
#Deleted in new
chr20	51130787	51131667	chr20:51130787-51131667	7	-	51130787	51130787	16724991	1	880,	0,
#Partially deleted in new
chr20	51386956	51542719	chr20:51386956-51542719	1	-	51398686	51542499	0	11	4495,88,690,127,56,141,173,203,172,1030,350,	0,11686,45110,48231,48749,67591,87023,88501,129827,136124,155413,
#Partially deleted in new
chr20	51386956	51542719	chr20:51386956-51542719	3	-	51391395	51542499	0	10	4495,690,127,56,141,173,203,172,1030,350,	0,45110,48231,48749,67591,87023,88501,129827,136124,155413,
#Partially deleted in new
chr20	51388625	51562831	chr20:51388625-51562831	1	-	51391395	51562629	0	10	2826,690,127,56,141,173,203,172,1030,272,	0,43441,46562,47080,65922,85354,86832,128158,134455,173934,
#Partially deleted in new
chr20	51391227	51562629	chr20:51391227-51562629	1	-	51398686	51562629	0	11	224,88,690,127,56,141,173,203,172,1030,70,	0,7415,40839,43960,44478,63320,82752,84230,125556,131853,171332,
#Partially deleted in new
chr20	51391227	51562831	chr20:51391227-51562831	1	-	51398686	51523583	0	11	224,88,690,127,56,141,173,203,172,516,272,	0,7415,40839,43960,44478,63320,82752,84230,125556,131853,171332,
#Partially deleted in new
chr20	51391227	51542719	chr20:51391227-51542719	1	-	51398686	51523583	0	11	224,88,690,127,56,141,173,203,172,516,350,	0,7415,40839,43960,44478,63320,82752,84230,125556,131853,151142,
#Partially deleted in new
chr20	51391408	51399219	chr20:51391408-51399219	0	-	51391408	51391408	8553170	2	43,577,	0,7234,
#Deleted in new
chr20	51452904	51452977	chr20:51452904-51452977	3	-	51452904	51452904	5263520	1	73,	0,
#Partially deleted in new
chr20	51596513	51768328	chr20:51596513-51768328	1	-	51601210	51768324	789624	23	4834,204,58,109,65,156,65,145,90,99,171,84,93,162,213,113,143,161,77,109,114,145,27,	0,8303,11013,12004,13587,17163,20976,22148,22440,25560,28678,31086,32466,42829,60424,73483,74601,77639,79618,116452,129305,133320,171788,
#Partially deleted in new
chr20	51596513	51768634	chr20:51596513-51768634	3	-	51601210	51768369	789624	28	4834,204,58,109,65,156,65,145,90,99,171,84,93,162,213,113,143,161,77,76,81,95,52,59,109,114,145,333,	0,8303,11013,12004,13587,17163,20976,22148,22440,25560,28678,31086,32466,42829,60424,73483,74601,77639,79618,92550,94225,97494,99579,100910,116452,129305,133320,171788,
#Partially deleted in new
chr20	51725818	51732587	chr20:51725818-51732587	0	-	51725818	51725818	8553170	3	114,145,211,	0,4015,6558,
#Partially deleted in new
chr20	51734532	51735067	chr20:51734532-51735067	7	+	51734532	51734532	16724991	2	76,383,	0,152,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	51782330	51802520	chr20:51782330-51802520	3	-	51784264	51802408	789624	4	2354,281,2331,242,	0,6530,7691,19948,
#Partially deleted in new
chr20	51784045	51802509	chr20:51784045-51802509	1	-	51784264	51802408	789624	3	639,281,231,	0,4815,18233,
#Partially deleted in new
chr20	51784264	51802475	chr20:51784264-51802475	1	-	51784264	51802408	789624	4	420,281,1020,197,	0,4596,7068,18014,
#Partially deleted in new
chr20	51791982	51801586	chr20:51791982-51801586	0	-	51791982	51791982	8553170	4	370,168,148,96,	0,776,5443,9508,
#Partially deleted in new
chr20	51792067	51793078	chr20:51792067-51793078	0	-	51792067	51792067	8553170	2	285,320,	0,691,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	51831796	51862912	chr20:51831796-51862912	3	-	51831796	51831796	789624	3	2173,65,88,	0,10888,31028,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	51902290	51902395	chr20:51902290-51902395	3	+	51902290	51902290	8553170	1	105,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	51904968	51905030	chr20:51904968-51905030	3	+	51904968	51904968	8553170	1	62,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	52051662	52191779	chr20:52051662-52191779	1	-	52052112	52191636	789624	9	470,252,63,150,252,63,162,240,189,	0,36729,45710,46775,108460,113032,114201,135169,139928,
#Partially deleted in new
chr20	52084010	52191697	chr20:52084010-52191697	3	-	52084556	52191636	789624	9	1256,252,63,150,252,63,162,240,107,	0,4381,13362,14427,76112,80684,81853,102821,107580,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	52084010	52105644	chr20:52084010-52105644	1	-	52084556	52105237	789624	5	1256,252,63,150,513,	0,4381,13362,14427,21121,
#Partially deleted in new
chr20	52084968	52098466	chr20:52084968-52098466	0	-	52085052	52098466	789624	4	101,252,63,29,	0,3423,12404,13469,
#Partially deleted in new
chr20	52085240	52104923	chr20:52085240-52104923	0	-	52085240	52104824	789624	5	26,252,63,150,271,	0,3151,12132,13197,19412,
#Partially deleted in new
chr20	52088264	52098587	chr20:52088264-52098587	0	-	52088264	52088264	8553170	3	379,63,150,	0,9108,10173,
#Partially deleted in new
chr20	52088959	52176037	chr20:52088959-52176037	0	-	52088959	52088959	8553170	7	108,63,150,252,63,162,111,	0,8413,9478,71163,75735,76904,86967,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	52096807	52104850	chr20:52096807-52104850	0	-	52097095	52104824	789624	4	299,63,150,198,	0,565,1630,7845,
#Deleted in new
chr20	52110343	52111049	chr20:52110343-52111049	7	-	52110343	52110343	16724991	1	706,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	52151277	52191986	chr20:52151277-52191986	1	-	52152145	52191636	0	6	2151,252,63,162,240,396,	0,8845,13417,14586,35554,40313,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	52151277	52191760	chr20:52151277-52191760	1	-	52152145	52191636	0	5	2151,252,63,240,170,	0,8845,13417,35554,40313,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	52151277	52191768	chr20:52151277-52191768	1	-	52152145	52191636	789624	6	2151,252,63,162,234,178,	0,8845,13417,14586,35554,40313,
#Partially deleted in new
chr20	52160260	52204308	chr20:52160260-52204308	0	-	52160260	52160260	8553170	5	114,63,162,240,113,	0,4434,5603,26571,43935,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	52210644	52646741	chr20:52210644-52646741	1	+	52210644	52210644	8553170	7	96,164,37,38,61,97,252,	0,24124,94310,144677,320243,339386,435845,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	52451463	52455619	chr20:52451463-52455619	3	-	52451463	52451463	8553170	3	180,209,42,	0,855,4114,
#Deleted in new
chr20	52482800	52482991	chr20:52482800-52482991	3	-	52482800	52482800	8553170	1	191,	0,
#Partially deleted in new
chr20	52487921	52500591	chr20:52487921-52500591	3	-	52487921	52487921	8553170	2	341,232,	0,12438,
#Deleted in new
chr20	52511251	52511568	chr20:52511251-52511568	7	+	52511251	52511251	16724991	1	317,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	52620837	52650431	chr20:52620837-52650431	3	+	52620837	52620837	789624	3	309,139,3942,	0,1024,25652,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	52671916	52690608	chr20:52671916-52690608	3	+	52671916	52671916	8553170	5	44,127,89,139,87,	0,2468,5103,13158,18605,
#Partially deleted in new
chr20	52674410	52681578	chr20:52674410-52681578	1	+	52674410	52674410	8553170	4	101,101,89,174,	0,799,2609,6994,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	52681427	52690580	chr20:52681427-52690580	0	+	52681427	52681427	8553170	3	123,139,59,	0,3647,9094,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	52681427	52690580	chr20:52681427-52690580	0	+	52681427	52681427	8553170	2	123,59,	0,9094,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	52681427	52690580	chr20:52681427-52690580	1	+	52681427	52681427	8553170	4	123,139,217,59,	0,3647,6521,9094,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	52685121	52690929	chr20:52685121-52690929	0	+	52685121	52685121	8553170	3	92,93,189,	0,5400,5619,
#Partially deleted in new
chr20	52858337	52862855	chr20:52858337-52862855	3	-	52858337	52858337	8553170	2	170,289,	0,4229,
#Deleted in new
chr20	52890161	52890386	chr20:52890161-52890386	7	+	52890161	52890161	16724991	1	225,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	52972406	53495330	chr20:52972406-53495330	3	+	52973293	53256563	789624	3	927,3073,8187,	0,281092,514737,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	53097651	53097984	chr20:53097651-53097984	3	+	53097651	53097651	8553170	1	333,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	53168642	53179550	chr20:53168642-53179550	3	-	53168642	53168642	8553170	2	207,1413,	0,9495,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	53185282	53487479	chr20:53185282-53487479	1	+	53185645	53256563	789624	3	394,3073,336,	0,68216,301861,
#Partially deleted in new
chr20	53185645	53256560	chr20:53185645-53256560	1	+	53185645	53256560	789624	2	31,3062,	0,67853,
#Partially deleted in new
chr20	53196228	53208705	chr20:53196228-53208705	3	-	53196228	53196228	8553170	5	136,43,128,61,117,	0,262,1951,10314,12360,
#Partially deleted in new
chr20	53255978	53491063	chr20:53255978-53491063	0	+	53255978	53256563	789624	3	593,189,198,	0,231165,234887,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	53397660	53412910	chr20:53397660-53412910	3	-	53397660	53397660	8553170	3	2827,102,351,	0,3472,14899,
#Deleted in new
chr20	53421198	53421656	chr20:53421198-53421656	7	+	53421198	53421198	16724991	1	458,	0,
#Deleted in new
chr20	53488955	53489625	chr20:53488955-53489625	1	+	53488977	53489202	789624	1	670,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	53544614	53544725	chr20:53544614-53544725	3	+	53544614	53544614	8553170	1	111,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	53552769	53575863	chr20:53552769-53575863	3	+	53552769	53552769	789624	6	318,118,119,232,209,1506,	0,3868,9979,17502,19878,21588,
#Partially deleted in new
chr20	53567064	53593839	chr20:53567064-53593839	3	-	53571743	53582826	0	6	2200,133,1554,117,1708,84,	0,4656,8662,11269,14396,26691,
#Partially deleted in new
chr20	53567072	53583097	chr20:53567072-53583097	1	-	53571743	53582826	0	5	2192,133,1554,117,1637,	0,4648,8654,11261,14388,
#Partially deleted in new
chr20	53568819	53576027	chr20:53568819-53576027	0	-	53569115	53576027	789624	2	445,301,	0,6907,
#Partially deleted in new
chr20	53582541	53608892	chr20:53582541-53608892	0	-	53582541	53582826	789624	3	627,91,61,	0,25812,26290,
#Partially deleted in new
chr20	53582924	53609907	chr20:53582924-53609907	0	-	53582924	53582924	8553170	4	244,73,91,160,	0,14706,25429,26823,
#Partially deleted in new
chr20	53608353	53634590	chr20:53608353-53634590	3	+	53608353	53608353	789624	3	158,162,61,	0,9483,26176,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	53668696	53668758	chr20:53668696-53668758	3	-	53668696	53668696	8553170	1	62,	0,
#Partially deleted in new
chr20	53799822	53801318	chr20:53799822-53801318	3	-	53799822	53799822	8553170	2	169,176,	0,1320,
#Deleted in new
chr20	53875251	53875557	chr20:53875251-53875557	7	-	53875251	53875251	16724991	1	306,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	53936776	54028700	chr20:53936776-54028700	0	-	53941457	54028700	789624	9	4748,71,264,168,213,135,45,159,309,	0,8149,16655,30129,48510,55735,58235,59115,91615,
#Deleted in new
chr20	53940159	53942508	chr20:53940159-53942508	3	+	53940159	53940159	8553170	3	439,111,334,	0,1125,2015,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	53943540	54070545	chr20:53943540-54070545	1	-	53944921	54058718	789624	10	1456,264,42,213,45,159,581,70,77,113,	0,9891,31848,41746,51471,52351,84851,114544,115106,126892,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	53943540	54070594	chr20:53943540-54070594	3	-	53944921	54058718	789624	12	1456,264,66,168,42,213,45,159,581,70,77,162,	0,9891,13891,23365,31848,41746,51471,52351,84851,114544,115106,126892,
#Partially deleted in new
chr20	53944782	53995929	chr20:53944782-53995929	0	-	53944921	53995929	789624	7	214,264,66,42,213,45,38,	0,8649,12649,30606,40504,50229,51109,
#Deleted in new
chr20	54068407	54068485	chr20:54068407-54068485	3	-	54068407	54068407	5263520	1	78,	0,
#Partially deleted in new
chr20	54153448	54173973	chr20:54153448-54173973	3	-	54157178	54173579	789624	12	1313,121,198,79,167,146,112,92,97,94,191,652,	0,3720,3939,4637,5508,9268,11003,12293,16143,18128,19460,19873,
#Partially deleted in new
chr20	54153961	54173649	chr20:54153961-54173649	1	-	54157178	54173579	789624	11	800,121,79,167,146,112,92,97,94,191,328,	0,3207,4124,4995,8755,10490,11780,15630,17615,18947,19360,
#Partially deleted in new
chr20	54154369	54157298	chr20:54154369-54157298	0	-	54154369	54154369	8553170	2	564,130,	0,2799,
#Partially deleted in new
chr20	54154712	54171953	chr20:54154712-54171953	1	-	54157178	54171693	789624	10	49,121,198,79,167,146,112,92,97,377,	0,2456,2675,3373,4244,8004,9739,11029,14879,16864,
#Partially deleted in new
chr20	54162579	54164548	chr20:54162579-54164548	0	-	54162579	54162579	8553170	2	283,97,	0,1872,
#Deleted in new
chr20	54172799	54173416	chr20:54172799-54173416	0	-	54172799	54172799	8553170	2	300,95,	0,522,
#Partially deleted in new
chr20	54207846	54219953	chr20:54207846-54219953	3	+	54208100	54219150	789624	4	278,108,141,935,	0,6504,7453,11172,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	54208094	54228052	chr20:54208094-54228052	0	+	54208100	54224237	789624	6	30,108,141,127,73,100,	0,6256,7205,10924,16132,19858,
#Partially deleted in new
chr20	54208299	54219285	chr20:54208299-54219285	0	+	54208299	54208299	8553170	4	143,108,141,267,	0,6051,7000,10719,
#Partially deleted in new
chr20	54208311	54219203	chr20:54208311-54219203	0	+	54208311	54208311	8553170	5	247,81,108,141,185,	0,523,6039,6988,10707,
#Partially deleted in new
chr20	54208427	54214410	chr20:54208427-54214410	0	+	54208427	54208427	8553170	2	131,60,	0,5923,
#Partially deleted in new
chr20	54475596	54651171	chr20:54475596-54651171	3	+	54475946	54650479	0	8	416,108,115,120,190,136,121,757,	0,79336,112886,113090,116019,134791,167861,174818,
#Partially deleted in new
chr20	54475625	54495154	chr20:54475625-54495154	0	+	54475625	54475625	8553170	2	387,355,	0,19174,
#Partially deleted in new
chr20	54475717	54650890	chr20:54475717-54650890	1	+	54588721	54650479	0	8	187,108,115,120,190,136,121,476,	0,79215,112765,112969,115898,134670,167740,174697,
#Deleted in new
chr20	54554932	54555557	chr20:54554932-54555557	0	+	54554932	54554932	8553170	2	108,286,	0,339,
#Deleted in new
chr20	54859687	54859812	chr20:54859687-54859812	3	-	54859687	54859687	8553170	1	125,	0,
#Deleted in new
chr20	55074643	55075140	chr20:55074643-55075140	7	+	55074643	55074643	16724991	1	497,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	55408897	55426642	chr20:55408897-55426642	0	+	55408897	55408897	8553170	5	27,88,89,200,83,	0,349,1139,16973,17662,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	55408897	55426642	chr20:55408897-55426642	1	+	55408897	55408897	8553170	6	27,88,89,54,200,83,	0,349,1139,3032,16973,17662,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	55420335	55427197	chr20:55420335-55427197	3	-	55420335	55420335	789624	3	2027,134,129,	0,3141,6733,
#Deleted in new
chr20	55423010	55426790	chr20:55423010-55426790	0	+	55423010	55423010	789624	3	236,200,231,	0,2860,3549,
#Deleted in new
chr20	55423019	55426692	chr20:55423019-55426692	0	+	55423019	55423019	8553170	3	508,200,133,	0,2851,3540,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	55423042	55468214	chr20:55423042-55468214	1	+	55423042	55423042	8553170	8	204,200,175,105,311,97,124,124,	0,2828,15086,25822,28496,29294,43774,45048,
#Deleted in new
chr20	55423054	55426680	chr20:55423054-55426680	0	+	55423054	55423054	8553170	3	192,200,295,	0,2816,3331,
#Deleted in new
chr20	55423060	55426421	chr20:55423060-55426421	1	+	55423060	55423060	8553170	2	186,551,	0,2810,
#Deleted in new
chr20	55423369	55426692	chr20:55423369-55426692	1	+	55423369	55423369	8553170	3	672,200,133,	0,2501,3190,
#Partially deleted in new
chr20	55425882	55482777	chr20:55425882-55482777	3	+	55425882	55425882	8553170	4	188,124,124,263,	0,40934,42208,56632,
#Deleted in new
chr20	55504905	55505215	chr20:55504905-55505215	3	-	55504905	55504905	8553170	1	310,	0,
#Partially deleted in new
chr20	55997439	56005472	chr20:55997439-56005472	3	-	55998556	56004171	789624	3	1315,117,1592,	0,3291,6441,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	56205051	56205173	chr20:56205051-56205173	7	-	56205051	56205051	16724991	1	122,	0,
#Deleted in new
chr20	56248731	56249815	chr20:56248731-56249815	3	+	56248843	56249815	789624	1	1084,	0,
#Partially deleted in new
chr20	56267871	56269231	chr20:56267871-56269231	7	+	56267871	56267871	16724991	2	237,858,	0,502,
#Deleted in new
chr20	56295966	56299160	chr20:56295966-56299160	3	-	56295966	56295966	8553170	2	381,72,	0,3122,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	56358914	56368663	chr20:56358914-56368663	3	+	56359005	56366287	789624	3	277,176,2593,	0,6172,7156,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	56359108	56360712	chr20:56359108-56360712	0	+	56359108	56360256	789624	2	83,531,	0,1073,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	56369388	56392295	chr20:56369388-56392295	1	-	56370157	56388197	789624	10	952,175,149,139,192,55,277,47,110,142,	0,1096,4019,12044,13596,14881,16868,18767,21167,22765,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	56369389	56392295	chr20:56369389-56392295	1	-	56370157	56388197	789624	10	951,175,149,139,192,55,277,47,110,128,	0,1095,4018,12043,13595,14880,16867,18766,21166,22778,
#Partially deleted in new
chr20	56369389	56392205	chr20:56369389-56392205	1	-	56370157	56388197	789624	9	951,175,149,139,192,55,277,47,263,	0,1095,4018,12043,13595,14880,16867,18766,22553,
#Partially deleted in new
chr20	56369389	56392337	chr20:56369389-56392337	3	-	56370157	56388197	789624	9	951,175,149,139,192,55,277,47,184,	0,1095,4018,12043,13595,14880,16867,18766,22764,
#Partially deleted in new
chr20	56369389	56392296	chr20:56369389-56392296	1	-	56370157	56388197	789624	9	951,175,149,139,192,55,277,47,129,	0,1095,4018,12043,13595,14880,16867,18766,22778,
#Partially deleted in new
chr20	56369664	56392215	chr20:56369664-56392215	1	-	56370469	56388197	789624	8	995,149,139,192,55,277,47,48,	0,3743,11768,13320,14605,16592,18491,22503,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	56373447	56392215	chr20:56373447-56392215	0	-	56373447	56388197	789624	8	109,139,192,55,277,47,110,62,	0,7985,9537,10822,12809,14708,17108,18706,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	56383110	56392131	chr20:56383110-56392131	0	-	56383110	56388197	789624	6	66,55,277,47,110,189,	0,1159,3146,5045,7445,8832,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	56386336	56392202	chr20:56386336-56392202	0	-	56386336	56388197	789624	5	197,47,195,110,35,	0,1819,1975,4219,5831,
#Partially deleted in new
chr20	56392370	56399357	chr20:56392370-56399357	0	+	56395552	56399357	789624	5	168,201,278,198,391,	0,3150,4836,5273,6596,
#Partially deleted in new
chr20	56392370	56395937	chr20:56392370-56395937	0	+	56392370	56392370	8553170	2	168,417,	0,3150,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	56392393	56406369	chr20:56392393-56406369	3	+	56395552	56403727	0	6	320,201,278,198,391,2902,	0,3127,4813,5250,6573,11074,
#Partially deleted in new
chr20	56392410	56397463	chr20:56392410-56397463	0	+	56395552	56397463	789624	3	128,169,257,	0,3142,4796,
#Partially deleted in new
chr20	56392521	56397086	chr20:56392521-56397086	0	+	56392521	56392521	8553170	3	192,201,169,	0,2999,4396,
#Partially deleted in new
chr20	56392650	56399357	chr20:56392650-56399357	0	+	56395552	56399357	789624	5	165,201,278,198,391,	0,2870,4556,4993,6316,
#Partially deleted in new
chr20	56392682	56404462	chr20:56392682-56404462	0	+	56395552	56395732	789624	6	133,239,278,198,391,995,	0,2838,4524,4961,6284,10785,
#Partially deleted in new
chr20	56392694	56399161	chr20:56392694-56399161	0	+	56395552	56395732	789624	5	19,239,278,198,195,	0,2826,4512,4949,6272,
#Partially deleted in new
chr20	56412111	56458780	chr20:56412111-56458780	3	+	56412458	56458747	0	7	103,158,423,102,81,1311,441,	0,225,25052,33788,38487,39707,46228,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	56412260	56460387	chr20:56412260-56460387	1	+	56412458	56458747	0	5	234,423,102,81,2048,	0,24903,33639,38338,46079,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	56412307	56453896	chr20:56412307-56453896	0	+	56412307	56412307	8553170	5	187,423,102,81,2078,	0,24856,33592,38291,39511,
#Deleted in new
chr20	56459427	56459583	chr20:56459427-56459583	7	-	56459427	56459427	16724991	1	156,	0,
#Partially deleted in new
chr20	56468584	56518886	chr20:56468584-56518886	1	+	56468697	56518265	789624	10	182,90,95,94,140,79,114,55,96,800,	0,3741,4716,6093,8400,15526,44730,48350,48521,49502,
#Partially deleted in new
chr20	56468590	56519449	chr20:56468590-56519449	3	+	56468697	56518265	789624	9	176,95,94,140,79,114,55,96,1363,	0,4710,6087,8394,15520,44724,48344,48515,49496,
#Partially deleted in new
chr20	56468613	56518887	chr20:56468613-56518887	1	+	56468697	56518092	789624	8	153,95,94,140,79,114,96,801,	0,4687,6064,8371,15497,44701,48492,49473,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	56468657	56473360	chr20:56468657-56473360	0	+	56468657	56468657	8553170	5	109,342,56,90,60,	0,1942,2956,3668,4643,
#Partially deleted in new
chr20	56468677	56517201	chr20:56468677-56517201	0	+	56468697	56517201	789624	9	89,90,95,94,140,79,114,55,96,	0,3648,4623,6000,8307,15433,44637,48257,48428,
#Partially deleted in new
chr20	56468678	56474759	chr20:56468678-56474759	0	+	56468678	56468678	8553170	5	88,56,90,95,82,	0,2935,3647,4622,5999,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	56468685	56477032	chr20:56468685-56477032	0	+	56468685	56468685	8553170	7	81,152,56,90,95,94,48,	0,1914,2928,3640,4615,5992,8299,
#Partially deleted in new
chr20	56491491	56525925	chr20:56491491-56525925	1	-	56491556	56497242	789624	7	292,96,1030,240,42,221,143,	0,3710,5147,12563,22304,22593,34291,
#Partially deleted in new
chr20	56491491	56497608	chr20:56491491-56497608	3	-	56491556	56497608	789624	4	292,96,775,192,	0,3710,5147,5925,
#Partially deleted in new
chr20	56513390	56518245	chr20:56513390-56518245	0	+	56513390	56513390	8553170	3	38,267,159,	0,3544,4696,
#Deleted in new
chr20	56515693	56518887	chr20:56515693-56518887	0	+	56515693	56515693	8553170	3	1296,96,801,	0,1412,2393,
#Partially deleted in new
chr20	56517186	56526075	chr20:56517186-56526075	0	+	56517186	56517186	8553170	4	15,211,168,272,	0,900,7703,8617,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	56522251	56523499	chr20:56522251-56523499	3	+	56522251	56522251	8553170	1	1248,	0,
#Partially deleted in new
chr20	56524485	56526142	chr20:56524485-56526142	3	+	56524808	56526070	789624	2	572,339,	0,1318,
#Partially deleted in new
chr20	56533245	56536520	chr20:56533245-56536520	3	+	56533341	56536438	789624	2	345,349,	0,2926,
#Partially deleted in new
chr20	56577562	56596126	chr20:56577562-56596126	3	+	56577562	56577562	789624	6	50,209,163,135,68,73,	0,179,1828,2638,17500,18491,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	56596309	56598621	chr20:56596309-56598621	1	+	56596309	56596309	8553170	2	179,119,	0,2193,
#Deleted in new
chr20	56601700	56602113	chr20:56601700-56602113	7	+	56601700	56601700	16724991	1	413,	0,
#Partially deleted in new
chr20	56629301	56639283	chr20:56629301-56639283	3	+	56629544	56638013	789624	7	291,486,52,217,119,145,1556,	0,1903,2503,4051,4848,7308,8426,
#Deleted in new
chr20	56630233	56631547	chr20:56630233-56631547	0	+	56630360	56631547	789624	2	139,343,	0,971,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	56667429	56667531	chr20:56667429-56667531	3	+	56667429	56667429	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	56688400	56688695	chr20:56688400-56688695	3	+	56688400	56688400	8553170	1	295,	0,
#Partially deleted in new
chr20	56700836	56701514	chr20:56700836-56701514	7	-	56700836	56700836	16724991	2	157,170,	0,508,
#Deleted in new
chr20	56730396	56731460	chr20:56730396-56731460	3	+	56730396	56730396	8553170	2	55,428,	0,636,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	57105740	57107128	chr20:57105740-57107128	3	+	57105740	57105740	8553170	3	77,114,186,	0,348,1202,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	57114914	57122092	chr20:57114914-57122092	3	+	57114914	57114914	8553170	3	199,81,490,	0,2200,6688,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	57161821	57163775	chr20:57161821-57163775	3	+	57161821	57161821	8553170	1	1954,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	57168747	57266628	chr20:57168747-57266628	3	-	57170958	57266122	0	7	2361,111,77,198,149,193,924,	0,4452,6183,14974,33727,59481,96957,
#Partially deleted in new
chr20	57170530	57266342	chr20:57170530-57266342	1	-	57170958	57266122	789624	6	578,111,77,149,193,638,	0,2669,4400,31944,57698,95174,
#Partially deleted in new
chr20	57170916	57173589	chr20:57170916-57173589	0	-	57170916	57170916	8553170	2	192,390,	0,2283,
#Partially deleted in new
chr20	57171038	57224685	chr20:57171038-57224685	0	-	57171038	57171038	8553170	6	70,111,77,198,149,111,	0,2161,3892,12683,31436,53536,
#Partially deleted in new
chr20	57172995	57266629	chr20:57172995-57266629	1	-	57173106	57266122	789624	6	315,77,198,149,193,925,	0,1935,10726,29479,55233,92709,
#Partially deleted in new
chr20	57173219	57265778	chr20:57173219-57265778	0	-	57173219	57265778	789624	7	91,77,198,149,108,193,74,	0,1711,10502,29255,52635,55009,92485,
#Partially deleted in new
chr20	57177695	57187156	chr20:57177695-57187156	0	-	57177695	57177695	8553170	3	342,198,107,	0,6026,9354,
#Partially deleted in new
chr20	57202473	57224840	chr20:57202473-57224840	0	-	57202473	57202473	8553170	2	150,81,	0,22286,
#Partially deleted in new
chr20	57202473	57244034	chr20:57202473-57244034	0	-	57202473	57202473	8553170	3	150,193,171,	0,25755,41390,
#Deleted in new
chr20	57214871	57215866	chr20:57214871-57215866	3	+	57214871	57214871	8553170	2	77,359,	0,636,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	57266796	57282998	chr20:57266796-57282998	3	+	57266796	57266796	8553170	2	410,756,	0,15446,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	57266801	57280485	chr20:57266801-57280485	1	+	57266801	57266801	8553170	3	125,55,72,	0,5196,13612,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	57311853	57311958	chr20:57311853-57311958	3	+	57311853	57311853	8553170	1	105,	0,
#Deleted in new
chr20	57321501	57321591	chr20:57321501-57321591	3	-	57321501	57321501	5263520	1	90,	0,
#Deleted in new
chr20	57328545	57328696	chr20:57328545-57328696	7	+	57328545	57328545	16724991	1	151,	0,
#Partially deleted in new
chr20	57329758	57343994	chr20:57329758-57343994	3	+	57329867	57343460	789624	13	240,114,89,67,109,87,37,110,100,38,77,112,654,	0,2074,3429,3928,4228,4991,5660,6039,8517,9230,10343,12970,13582,
#Partially deleted in new
chr20	57329812	57343994	chr20:57329812-57343994	1	+	57329867	57343460	789624	12	186,89,67,109,87,37,110,100,38,77,112,654,	0,3375,3874,4174,4937,5606,5985,8463,9176,10289,12916,13528,
#Partially deleted in new
chr20	57329858	57343994	chr20:57329858-57343994	1	+	57329867	57343460	789624	12	140,89,67,109,87,37,98,100,38,77,112,654,	0,3329,3828,4128,4891,5560,5951,8417,9130,10243,12870,13482,
#Partially deleted in new
chr20	57329933	57339026	chr20:57329933-57339026	0	+	57329933	57339026	789624	10	65,114,89,67,109,87,37,104,100,38,	0,1899,3254,3753,4053,4816,5485,5870,8342,9055,
#Partially deleted in new
chr20	57334749	57343994	chr20:57334749-57343994	0	+	57334749	57342733	789624	7	87,37,110,33,100,112,654,	0,669,1048,2989,3526,7979,8591,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	57351009	57379211	chr20:57351009-57379211	3	+	57354038	57378099	0	12	413,97,105,93,87,87,72,108,107,76,195,1199,	0,3022,3702,5436,14346,15797,15998,17695,22465,22653,23597,27003,
#Partially deleted in new
chr20	57351222	57379211	chr20:57351222-57379211	1	+	57354038	57378099	0	12	136,97,105,93,87,87,72,108,107,76,195,1199,	0,2809,3489,5223,14133,15584,15785,17482,22252,22440,23384,26790,
#Partially deleted in new
chr20	57351251	57375106	chr20:57351251-57375106	1	+	57354038	57375095	789624	11	171,97,105,93,87,87,72,108,107,76,500,	0,2780,3460,5194,14104,15555,15756,17453,22223,22411,23355,
#Partially deleted in new
chr20	57351273	57378099	chr20:57351273-57378099	0	+	57354038	57373674	789624	11	149,97,105,93,87,87,72,108,76,195,87,	0,2758,3438,5172,14082,15533,15734,17431,22389,23333,26739,
#Partially deleted in new
chr20	57351509	57366843	chr20:57351509-57366843	0	+	57354038	57366843	789624	7	61,108,97,105,93,87,37,	0,381,2522,3202,4936,13846,15297,
#Partially deleted in new
chr20	57351509	57366843	chr20:57351509-57366843	0	+	57354038	57366843	789624	6	61,97,105,93,87,37,	0,2522,3202,4936,13846,15297,
#Partially deleted in new
chr20	57351543	57379211	chr20:57351543-57379211	1	+	57354038	57378099	0	12	376,97,105,93,87,87,72,108,107,76,195,1199,	0,2488,3168,4902,13812,15263,15464,17161,21931,22119,23063,26469,
#Deleted in new
chr20	57351576	57356512	chr20:57351576-57356512	0	+	57354038	57356512	789624	4	422,97,105,67,	0,2455,3135,4869,
#Deleted in new
chr20	57357425	57358369	chr20:57357425-57358369	7	-	57357425	57357425	16724991	1	944,	0,
#Deleted in new
chr20	57358441	57359980	chr20:57358441-57359980	3	-	57358964	57359039	789624	1	1539,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	57371133	57378463	chr20:57371133-57378463	0	+	57371133	57371133	8553170	3	2605,195,451,	0,3473,6879,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	57384159	57393062	chr20:57384159-57393062	3	-	57384159	57384159	789624	2	756,784,	0,8119,
#Partially deleted in new
chr20	57391406	57409333	chr20:57391406-57409333	3	+	57391581	57407846	0	4	412,124,55,1791,	0,1247,1872,16136,
#Partially deleted in new
chr20	57391427	57407713	chr20:57391427-57407713	1	+	57391581	57407547	0	3	391,124,171,	0,1226,16115,
#Partially deleted in new
chr20	57391452	57407776	chr20:57391452-57407776	0	+	57391581	57392416	789624	5	343,96,124,55,234,	0,944,1201,1826,16090,
#Partially deleted in new
chr20	57391636	57409333	chr20:57391636-57409333	0	+	57391650	57399952	789624	5	182,124,55,41,1791,	0,1017,1642,8291,15906,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	57392229	57407860	chr20:57392229-57407860	1	+	57392659	57407846	789624	4	263,124,55,318,	0,424,1049,15313,
#Deleted in new
chr20	57488391	57489027	chr20:57488391-57489027	7	-	57488391	57488391	16724991	1	636,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	57495965	57525107	chr20:57495965-57525107	1	-	57496249	57524205	789624	12	399,148,166,183,161,150,121,134,171,211,554,80,	0,2588,7470,12640,16626,18626,19748,22792,23241,27102,27697,29062,
#Partially deleted in new
chr20	57497163	57525652	chr20:57497163-57525652	1	-	57498549	57524205	789624	10	1538,166,183,161,121,134,171,211,554,625,	0,6272,11442,15428,18550,21594,22043,25904,26499,27864,
#Partially deleted in new
chr20	57497163	57524867	chr20:57497163-57524867	1	-	57498549	57524205	789624	10	1538,166,183,161,150,121,134,171,211,1205,	0,6272,11442,15428,17428,18550,21594,22043,25904,26499,
#Partially deleted in new
chr20	57497163	57525652	chr20:57497163-57525652	3	-	57498549	57524205	789624	12	1538,166,183,161,150,121,134,171,211,554,100,179,	0,6272,11442,15428,17428,18550,21594,22043,25904,26499,27864,28310,
#Partially deleted in new
chr20	57497167	57525209	chr20:57497167-57525209	1	-	57498549	57524205	789624	11	1534,166,183,161,150,121,134,171,211,554,182,	0,6268,11438,15424,17424,18546,21590,22039,25900,26495,27860,
#Partially deleted in new
chr20	57497167	57525579	chr20:57497167-57525579	1	-	57498549	57524205	789624	11	1534,166,183,161,150,121,134,171,211,554,106,	0,6268,11438,15424,17424,18546,21590,22039,25900,26495,28306,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	57499553	57524867	chr20:57499553-57524867	0	-	57503596	57524205	789624	8	857,166,99,121,134,171,211,1205,	0,3882,9052,16160,19204,19653,23514,24109,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	57499553	57524867	chr20:57499553-57524867	0	-	57513846	57524205	789624	11	857,166,183,161,637,150,121,134,171,211,1205,	0,3882,9052,13038,13682,15038,16160,19204,19653,23514,24109,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	57499553	57525107	chr20:57499553-57525107	1	-	57500252	57523206	789624	10	857,166,183,161,150,121,134,171,211,80,	0,3882,9052,13038,15038,16160,19204,19653,23514,25474,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	57499553	57525107	chr20:57499553-57525107	1	-	57500252	57519345	789624	9	857,166,183,161,150,121,134,171,80,	0,3882,9052,13038,15038,16160,19204,19653,25474,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	57499553	57524257	chr20:57499553-57524257	1	-	57500252	57524205	789624	10	857,166,183,161,150,121,134,171,211,595,	0,3882,9052,13038,15038,16160,19204,19653,23514,24109,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	57506741	57525652	chr20:57506741-57525652	1	-	57507795	57524205	789624	10	1102,183,161,150,121,134,171,211,554,179,	0,1864,5850,7850,8972,12016,12465,16326,16921,18732,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	57506741	57524867	chr20:57506741-57524867	1	-	57507582	57524205	789624	6	1051,183,134,171,211,1205,	0,1864,12016,12465,16326,16921,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	57506741	57525107	chr20:57506741-57525107	1	-	57507582	57523206	789624	9	1051,183,161,150,121,134,171,211,80,	0,1864,5850,7850,8972,12016,12465,16326,18286,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	57506741	57525652	chr20:57506741-57525652	1	-	57507582	57524205	789624	10	1051,183,161,150,121,134,171,211,554,179,	0,1864,5850,7850,8972,12016,12465,16326,16921,18732,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	57506741	57525107	chr20:57506741-57525107	1	-	57507864	57519345	789624	8	1135,183,161,150,121,134,171,80,	0,1864,5850,7850,8972,12016,12465,18286,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	57514591	57524867	chr20:57514591-57524867	0	-	57514591	57514591	8553170	5	1243,134,171,211,1205,	0,4166,4615,8476,9071,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	57514591	57525107	chr20:57514591-57525107	0	-	57514591	57514591	8553170	4	1243,134,171,80,	0,4166,4615,10436,
#Partially deleted in new
chr20	57514591	57524867	chr20:57514591-57524867	0	-	57515612	57524205	789624	6	150,370,134,171,211,1205,	0,873,4166,4615,8476,9071,
#Partially deleted in new
chr20	57514591	57525107	chr20:57514591-57525107	0	-	57514591	57514591	8553170	5	150,370,134,171,80,	0,873,4166,4615,10436,
#Partially deleted in new
chr20	57518494	57525652	chr20:57518494-57525652	1	-	57518601	57524205	789624	5	397,171,211,554,179,	0,712,4573,5168,6979,
#Partially deleted in new
chr20	57518494	57524867	chr20:57518494-57524867	1	-	57518601	57524205	789624	4	397,171,211,1205,	0,712,4573,5168,
#Deleted in new
chr20	57561079	57568112	chr20:57561079-57568112	3	+	57561411	57565804	0	10	124,264,182,204,188,163,225,132,96,2763,	0,292,991,1616,1948,2485,3089,3402,3960,4270,
#Deleted in new
chr20	57561079	57566367	chr20:57561079-57566367	0	+	57561079	57561079	8553170	2	4056,1018,	0,4270,
#Deleted in new
chr20	57561102	57562307	chr20:57561102-57562307	0	+	57561102	57561102	8553170	2	101,936,	0,269,
#Deleted in new
chr20	57562347	57563607	chr20:57562347-57563607	0	+	57562347	57562347	8553170	3	552,188,43,	0,680,1217,
#Deleted in new
chr20	57562833	57563591	chr20:57562833-57563591	0	+	57562833	57562833	8553170	2	382,27,	0,731,
#Deleted in new
chr20	57564083	57565392	chr20:57564083-57565392	0	+	57564083	57564083	8553170	4	310,132,96,43,	0,398,956,1266,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	57599694	57601200	chr20:57599694-57601200	3	-	57599694	57599694	8553170	2	534,289,	0,1217,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	57603845	57620473	chr20:57603845-57620473	3	-	57604572	57620295	0	8	924,219,204,168,174,69,225,212,	0,6303,7881,9317,11041,11666,12398,16416,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	57603845	57620576	chr20:57603845-57620576	1	-	57604572	57620295	0	7	924,219,204,168,174,69,315,	0,6303,7881,9317,11041,11666,16416,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	57604054	57618081	chr20:57604054-57618081	0	-	57604054	57604054	8553170	7	715,219,163,204,168,174,2570,	0,6094,6478,7672,9108,10832,11457,
#Partially deleted in new
chr20	57612890	57620427	chr20:57612890-57620427	0	-	57612890	57612890	8553170	4	440,174,957,166,	0,1996,2621,7371,
#Partially deleted in new
chr20	57612890	57620394	chr20:57612890-57620394	1	-	57613085	57620295	0	5	440,174,69,225,133,	0,1996,2621,3353,7371,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	57614903	57620480	chr20:57614903-57620480	0	-	57614903	57614903	8553170	3	270,69,219,	0,608,5358,
#Partially deleted in new
chr20	57615025	57620478	chr20:57615025-57620478	0	-	57615025	57615025	8553170	4	35,69,225,260,	0,486,1218,5193,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	57615123	57620490	chr20:57615123-57620490	0	-	57615123	57615123	8553170	4	50,69,225,229,	0,388,1120,5138,
#Partially deleted in new
chr20	57648391	57709902	chr20:57648391-57709902	1	-	57652052	57709582	789624	4	4207,54,155,429,	0,4641,11151,61082,
#Partially deleted in new
chr20	57648391	57710589	chr20:57648391-57710589	1	-	57652052	57710463	789624	4	4207,54,155,130,	0,4641,11151,62068,
#Partially deleted in new
chr20	57648391	57710569	chr20:57648391-57710569	1	-	57652052	57659656	789624	4	4207,54,155,103,	0,4641,11151,62075,
#Partially deleted in new
chr20	57648393	57711536	chr20:57648393-57711536	3	-	57652052	57659656	789624	4	4205,54,155,213,	0,4639,11149,62930,
#Partially deleted in new
chr20	57652036	57691830	chr20:57652036-57691830	1	-	57652052	57659656	789624	4	562,54,155,29,	0,996,7506,39765,
#Partially deleted in new
chr20	57652207	57690624	chr20:57652207-57690624	0	-	57652207	57690418	789624	4	391,54,155,231,	0,825,7335,38186,
#Partially deleted in new
chr20	57652406	57709760	chr20:57652406-57709760	0	-	57652406	57709582	789624	5	192,54,155,171,287,	0,626,7136,47609,57067,
#Partially deleted in new
chr20	57659549	57711536	chr20:57659549-57711536	0	-	57659549	57659549	8553170	2	148,213,	0,51774,
#Deleted in new
chr20	57710182	57711366	chr20:57710182-57711366	1	+	57710182	57710182	8553170	2	432,105,	0,1079,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	57710182	57712780	chr20:57710182-57712780	3	+	57710182	57710182	789624	1	2598,	0,
#Deleted in new
chr20	57895393	57895444	chr20:57895393-57895444	3	+	57895393	57895393	5263520	1	51,	0,
#Deleted in new
chr20	57957125	57959660	chr20:57957125-57959660	3	-	57957125	57957125	8553170	2	364,1490,	0,1045,
#Deleted in new
chr20	58003903	58004648	chr20:58003903-58004648	3	+	58003903	58003903	789624	2	164,464,	0,281,
#Deleted in new
chr20	58069053	58072060	chr20:58069053-58072060	3	-	58069053	58069053	8553170	2	674,340,	0,2667,
#Deleted in new
chr20	58069053	58072070	chr20:58069053-58072070	0	-	58069053	58069053	8553170	2	674,70,	0,2947,
#Deleted in new
chr20	58097266	58097591	chr20:58097266-58097591	7	+	58097266	58097266	16724991	1	325,	0,
#Partially deleted in new
chr20	58150903	58161150	chr20:58150903-58161150	3	+	58150964	58160822	789624	4	129,82,102,490,	0,2640,4564,9757,
#Partially deleted in new
chr20	58218494	58228653	chr20:58218494-58228653	3	-	58218494	58228653	789624	4	311,166,131,430,	0,2843,4557,9729,
#Partially deleted in new
chr20	58228939	58246244	chr20:58228939-58246244	5	-	58228939	58228939	16724991	10	2988,235,135,121,101,162,186,96,194,462,	0,3748,6300,7214,9271,10301,10720,11575,14572,16843,
#Partially deleted in new
chr20	58231788	58286399	chr20:58231788-58286399	5	-	58231788	58231788	16724991	18	139,142,135,121,101,162,186,96,194,470,185,159,66,108,146,143,107,86,	0,899,3451,4365,6422,7452,7871,8726,11723,13994,15533,16326,19098,19968,31583,39574,40980,54525,
#Partially deleted in new
chr20	58232776	58240548	chr20:58232776-58240548	4	-	58232776	58232776	16724991	7	146,98,121,101,162,186,34,	0,2500,3377,5434,6464,6883,7738,
#Partially deleted in new
chr20	58232803	58235887	chr20:58232803-58235887	4	-	58232803	58232803	16724991	2	119,648,	0,2436,
#Partially deleted in new
chr20	58237918	58309439	chr20:58237918-58309439	7	-	58237918	58237918	16724991	14	393,162,186,96,194,470,185,159,66,108,107,133,45,21,	0,1322,1741,2596,5593,7864,9403,10196,12968,13838,34850,48395,71307,71500,
#Deleted in new
chr20	58239504	58239987	chr20:58239504-58239987	4	-	58239504	58239504	16724991	1	483,	0,
#Deleted in new
chr20	58239754	58243705	chr20:58239754-58243705	4	-	58239754	58239754	16724991	3	91,196,194,	0,760,3757,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	58242369	58272825	chr20:58242369-58272825	4	-	58242369	58242369	16724991	7	1336,1724,159,66,108,143,57,	0,3413,5745,8517,9387,28993,30399,
#Partially deleted in new
chr20	58245745	58309439	chr20:58245745-58309439	5	-	58245745	58245745	16724991	10	507,185,159,66,108,143,107,133,45,21,	0,1576,2369,5141,6011,25617,27023,40568,63480,63673,
#Partially deleted in new
chr20	58247055	58251766	chr20:58247055-58251766	4	-	58247055	58247055	16724991	4	451,159,66,10,	0,1059,3831,4701,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	58309695	58367507	chr20:58309695-58367507	3	+	58309976	58359703	789624	7	317,80,82,72,107,110,7902,	0,1347,34022,43577,43736,44460,49910,
#Partially deleted in new
chr20	58309757	58346048	chr20:58309757-58346048	0	+	58309757	58309757	8553170	4	255,80,82,615,	0,1285,33960,35676,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	58389121	58451101	chr20:58389121-58451101	3	+	58389459	58444235	0	6	396,153,104,81,177,7025,	0,29089,45480,49823,51785,54955,
#Partially deleted in new
chr20	58389312	58445552	chr20:58389312-58445552	1	+	58389459	58444165	0	3	205,153,1476,	0,28898,54764,
#Partially deleted in new
chr20	58389365	58444531	chr20:58389365-58444531	0	+	58389459	58440911	789624	4	152,153,177,455,	0,28845,51541,54711,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	58389374	58446905	chr20:58389374-58446905	0	+	58389374	58389374	8553170	6	143,213,153,81,177,2829,	0,753,28836,49570,51532,54702,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	58431032	58445552	chr20:58431032-58445552	0	+	58431032	58431032	8553170	6	485,70,104,81,177,1476,	0,1314,3569,7912,9874,13044,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	58438976	58445552	chr20:58438976-58445552	0	+	58438976	58438976	8553170	2	2107,1476,	0,5100,
#Partially deleted in new
chr20	58459100	58514938	chr20:58459100-58514938	3	-	58460789	58514707	789624	4	2454,553,139,280,	0,8005,11508,55558,
#Deleted in new
chr20	58461124	58461980	chr20:58461124-58461980	0	-	58461124	58461124	8553170	2	430,152,	0,704,
#Partially deleted in new
chr20	58467639	58515131	chr20:58467639-58515131	0	-	58467639	58513898	789624	4	19,139,171,473,	0,2969,46177,47019,
#Partially deleted in new
chr20	58515378	58619888	chr20:58515378-58619888	3	+	58515378	58515378	789624	7	362,96,162,113,93,117,1149,	0,4125,6011,7790,8335,32433,103361,
#Partially deleted in new
chr20	58515498	58547822	chr20:58515498-58547822	1	+	58515498	58515498	8553170	5	242,96,113,93,11,	0,4005,7670,8215,32313,
#Partially deleted in new
chr20	58515498	58523802	chr20:58515498-58523802	1	+	58515498	58515498	8553170	4	242,122,113,89,	0,4005,7670,8215,
#Partially deleted in new
chr20	58515498	58524728	chr20:58515498-58524728	1	+	58515498	58515498	8553170	4	242,113,93,98,	0,7670,8215,9132,
#Partially deleted in new
chr20	58515542	58526032	chr20:58515542-58526032	0	+	58515542	58515542	8553170	3	198,113,2319,	0,7626,8171,
#Partially deleted in new
chr20	58515567	58522492	chr20:58515567-58522492	1	+	58515567	58515567	8553170	3	173,96,192,	0,3936,6733,
#Partially deleted in new
chr20	58515726	58573970	chr20:58515726-58573970	1	+	58515726	58515726	8553170	4	14,122,117,395,	0,3777,32085,57849,
#Partially deleted in new
chr20	58523159	58573824	chr20:58523159-58573824	1	+	58523159	58523159	8553170	4	122,93,117,249,	0,554,24652,50416,
#Partially deleted in new
chr20	58594416	58603973	chr20:58594416-58603973	3	+	58594416	58594416	8553170	2	130,377,	0,9180,
#Deleted in new
chr20	58634771	58635738	chr20:58634771-58635738	3	+	58634771	58634771	789624	1	967,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	58651252	58679524	chr20:58651252-58679524	1	+	58667504	58676291	789624	9	182,66,111,141,163,92,144,81,3338,	0,820,16234,16734,18038,19259,19901,22378,24934,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	58651271	58679526	chr20:58651271-58679526	1	+	58652006	58676291	789624	9	816,12,108,141,163,92,144,81,3340,	0,8351,16218,16715,18019,19240,19882,22359,24915,
#Partially deleted in new
chr20	58651271	58669424	chr20:58651271-58669424	0	+	58667504	58669424	789624	6	143,15,12,108,141,134,	0,801,8351,16218,16715,18019,
#Partially deleted in new
chr20	58651272	58671277	chr20:58651272-58671277	0	+	58667504	58671277	789624	7	142,15,108,141,163,92,124,	0,800,16217,16714,18018,19239,19881,
#Partially deleted in new
chr20	58651278	58669418	chr20:58651278-58669418	0	+	58667504	58669418	789624	6	156,15,12,108,141,128,	0,794,8344,16211,16708,18012,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	58651282	58679500	chr20:58651282-58679500	1	+	58667504	58676291	789624	10	152,66,12,108,141,163,92,144,81,3314,	0,790,8340,16207,16704,18008,19229,19871,22348,24904,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr20	58651282	58679526	chr20:58651282-58679526	3	+	58652006	58676291	789624	9	856,12,108,141,163,92,144,81,3340,	0,8340,16207,16704,18008,19229,19871,22348,24904,
#Partially deleted in new
chr20	58651282	58670547	chr20:58651282-58670547	0	+	58667504	58668023	789624	6	249,15,12,119,141,36,	0,790,8340,16207,16704,19229,
#Partially deleted in new
chr20	58651302	58676291	chr20:58651302-58676291	0	+	58667504	58670517	789624	9	132,15,118,108,141,92,144,81,105,	0,770,15898,16187,16684,19209,19851,22328,24884,
#Partially deleted in new
chr20	58651303	58676348	chr20:58651303-58676348	0	+	58667504	58670517	789624	8	131,15,108,141,92,144,81,162,	0,769,16186,16683,19208,19850,22327,24883,
#Partially deleted in new
chr20	58651312	58671219	chr20:58651312-58671219	0	+	58651312	58651312	8553170	7	94,15,12,108,141,92,66,	0,760,8310,16177,16674,19199,19841,
#Partially deleted in new
chr20	58651315	58676396	chr20:58651315-58676396	0	+	58651315	58651315	8553170	6	119,15,92,144,81,210,	0,757,19196,19838,22315,24871,
#Partially deleted in new
chr20	58651433	58715410	chr20:58651433-58715410	3	+	58652006	58691486	789624	23	705,12,108,141,163,92,144,81,194,158,57,186,171,90,82,143,72,78,101,124,177,111,243,	0,8189,16056,16553,17857,19078,19720,22197,39600,39971,40290,42303,42988,47250,47763,49582,54064,55689,61045,61986,62483,63126,63734,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	58651604	58679526	chr20:58651604-58679526	1	+	58652006	58676291	789624	8	483,108,141,163,92,144,81,3340,	0,15885,16382,17686,18907,19549,22026,24582,
#Partially deleted in new
chr20	58651745	58673711	chr20:58651745-58673711	0	+	58651745	58651745	8553170	5	393,108,141,92,81,	0,15744,16241,18766,21885,
#Partially deleted in new
chr20	58651865	58676328	chr20:58651865-58676328	0	+	58652006	58670517	789624	8	222,12,108,141,92,144,81,142,	0,7757,15624,16121,18646,19288,21765,24321,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	58651878	58679526	chr20:58651878-58679526	1	+	58652006	58676291	789624	8	260,108,141,163,92,144,81,3340,	0,15611,16108,17412,18633,19275,21752,24308,
#Partially deleted in new
chr20	58652006	58673711	chr20:58652006-58673711	0	+	58652006	58671175	789624	8	81,12,108,141,163,92,134,81,	0,7616,15483,15980,17284,18505,19157,21624,
#Partially deleted in new
chr20	58652025	58671284	chr20:58652025-58671284	0	+	58652025	58670517	789624	6	113,12,108,141,92,131,	0,7597,15464,15961,18486,19128,
#Partially deleted in new
chr20	58652096	58671297	chr20:58652096-58671297	0	+	58652096	58652096	8553170	7	42,12,108,141,152,92,144,	0,7526,15393,15890,17205,18415,19057,
#Partially deleted in new
chr20	58667519	58676486	chr20:58667519-58676486	0	+	58667519	58676291	789624	6	78,141,163,92,81,300,	0,467,1771,2992,6111,8667,
#Partially deleted in new
chr20	58673637	58692206	chr20:58673637-58692206	0	+	58673637	58673637	8553170	2	74,483,	0,18086,
#Partially deleted in new
chr20	58689130	58715633	chr20:58689130-58715633	1	+	58691764	58715326	789624	13	81,107,186,171,90,82,143,78,101,124,177,111,466,	0,2593,4606,5291,9553,10066,11885,17992,23348,24289,24786,25429,26037,
#Partially deleted in new
chr20	58689134	58715550	chr20:58689134-58715550	1	+	58691774	58715326	789624	13	77,57,186,171,90,82,143,78,101,124,177,111,383,	0,2589,4602,5287,9549,10062,11881,17988,23344,24285,24782,25425,26033,
#Partially deleted in new
chr20	58692612	58715844	chr20:58692612-58715844	3	+	58692900	58715326	789624	12	438,186,171,90,82,143,78,101,124,177,111,677,	0,1124,1809,6071,6584,8403,14510,19866,20807,21304,21947,22555,
#Partially deleted in new
chr20	58693168	58715844	chr20:58693168-58715844	0	+	58693168	58693168	8553170	7	754,171,90,82,143,78,3366,	0,1253,5515,6028,7847,13954,19310,
#Partially deleted in new
chr20	58693178	58719238	chr20:58693178-58719238	0	+	58693178	58693178	8553170	12	744,171,90,82,143,78,101,674,111,1144,136,1159,	0,1243,5505,6018,7837,13944,19300,20241,21381,21989,24681,24901,
#Partially deleted in new
chr20	58694420	58713580	chr20:58694420-58713580	0	+	58694420	58705551	789624	8	172,90,82,143,72,78,101,161,	0,4263,4776,6595,11077,12702,18058,18999,
#Deleted in new
chr20	58710794	58711633	chr20:58710794-58711633	3	+	58710794	58710794	8553170	2	121,456,	0,383,
#Deleted in new
chr20	58712820	58715844	chr20:58712820-58715844	0	+	58712820	58712820	8553170	3	1273,111,677,	0,1739,2347,
#Deleted in new
chr20	58713730	58714964	chr20:58713730-58714964	0	+	58713730	58713730	8553170	2	363,405,	0,829,
#Deleted in new
chr20	58717363	58719231	chr20:58717363-58719231	0	+	58717363	58717363	8553170	2	632,1152,	0,716,
#Partially deleted in new
chr20	58740531	58783821	chr20:58740531-58783821	7	-	58740531	58740531	16724991	14	184,148,15,212,203,128,244,158,145,149,81,181,185,147,	0,657,3373,6030,8827,22307,25556,28221,29479,31616,33652,37829,42120,43143,
#Deleted in new
chr20	58754350	58756838	chr20:58754350-58756838	3	+	58754350	58754350	8553170	3	72,130,1417,	0,284,1071,
#Deleted in new
chr20	58817131	58817725	chr20:58817131-58817725	3	-	58817131	58817131	8553170	1	594,	0,
#Deleted in new
chr20	58817614	58817694	chr20:58817614-58817694	3	-	58817614	58817614	5263520	1	80,	0,
#Deleted in new
chr20	58818225	58818313	chr20:58818225-58818313	3	-	58818225	58818225	5263520	1	88,	0,
#Partially deleted in new
chr20	58818918	58850903	chr20:58818918-58850903	3	-	58818918	58818918	789624	5	337,293,113,39,374,	0,23018,23514,29960,31611,
#Partially deleted in new
chr20	58819077	58840175	chr20:58819077-58840175	0	-	58819077	58819077	8553170	3	178,113,171,	0,6947,20927,
#Partially deleted in new
chr20	58824026	58850878	chr20:58824026-58850878	1	-	58824026	58824026	8553170	4	47,113,39,349,	0,1998,24852,26503,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	58826735	58840844	chr20:58826735-58840844	1	-	58826735	58826735	8553170	2	221,2120,	0,11989,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	58833808	58836529	chr20:58833808-58836529	3	-	58833808	58833808	8553170	2	860,293,	0,2428,
#Partially deleted in new
chr20	58839717	58911192	chr20:58839717-58911192	1	+	58840106	58840844	789624	13	1169,73,45,55,120,98,55,74,59,121,131,68,510,	0,55894,59223,63813,63954,65665,69444,69632,69803,69966,70233,70616,70965,
#Partially deleted in new
chr20	58839747	58911192	chr20:58839747-58911192	1	+	58840106	58840844	789624	13	1139,73,45,58,120,98,55,74,59,121,131,68,510,	0,55864,59193,63780,63924,65635,69414,69602,69773,69936,70203,70586,70935,
#Partially deleted in new
chr20	58839747	58900410	chr20:58839747-58900410	1	+	58840106	58840844	789624	4	1139,73,45,462,	0,55864,59193,60201,
#Partially deleted in new
chr20	58840343	58903543	chr20:58840343-58903543	0	+	58840343	58840844	789624	3	543,73,16,	0,55268,63184,
#Partially deleted in new
chr20	58840503	58905480	chr20:58840503-58905480	0	+	58840503	58840844	789624	5	383,73,55,120,98,	0,55108,63027,63168,64879,
#Partially deleted in new
chr20	58841342	58900410	chr20:58841342-58900410	0	+	58841342	58841342	8553170	3	533,73,462,	0,54269,58606,
#Partially deleted in new
chr20	58841484	58909423	chr20:58841484-58909423	0	+	58841484	58841484	8553170	8	391,73,45,55,120,98,55,74,	0,54127,57456,62046,62187,63898,67677,67865,
#Partially deleted in new
chr20	58841617	58903774	chr20:58841617-58903774	0	+	58841617	58841617	8553170	4	258,73,58,103,	0,53994,61910,62054,
#Partially deleted in new
chr20	58841617	58909394	chr20:58841617-58909394	0	+	58841617	58841617	8553170	7	258,73,55,120,98,55,45,	0,53994,61913,62054,63765,67544,67732,
#Partially deleted in new
chr20	58841621	58909188	chr20:58841621-58909188	0	+	58841621	58841621	8553170	7	254,73,45,58,120,98,27,	0,53990,57319,61906,62050,63761,67540,
#Partially deleted in new
chr20	58841643	58900410	chr20:58841643-58900410	0	+	58841643	58841643	8553170	4	232,73,45,462,	0,53968,57297,58305,
#Deleted in new
chr20	58842029	58842132	chr20:58842029-58842132	3	+	58842029	58842029	8553170	1	103,	0,
#Deleted in new
chr20	58842432	58842546	chr20:58842432-58842546	3	+	58842432	58842432	8553170	1	114,	0,
#Partially deleted in new
chr20	58843324	58909366	chr20:58843324-58909366	0	+	58843324	58843324	8553170	8	77,45,73,58,120,98,55,17,	0,705,52287,60203,60347,62058,65837,66025,
#Deleted in new
chr20	58850529	58850641	chr20:58850529-58850641	3	+	58850529	58850529	8553170	1	112,	0,
#Deleted in new
chr20	58850782	58850903	chr20:58850782-58850903	3	+	58850782	58850782	8553170	1	121,	0,
#Partially deleted in new
chr20	58852713	58911192	chr20:58852713-58911192	1	+	58853265	58910829	789624	13	2620,73,45,55,120,98,55,74,59,121,131,68,510,	0,42898,46227,50817,50958,52669,56448,56636,56807,56970,57237,57620,57969,
#Deleted in new
chr20	58853262	58857191	chr20:58853262-58857191	1	+	58853265	58855648	789624	2	2071,1638,	0,2291,
#Partially deleted in new
chr20	58853262	58911192	chr20:58853262-58911192	3	+	58853265	58910829	789624	12	2071,73,58,120,98,55,74,59,121,131,68,510,	0,42349,50265,50409,52120,55899,56087,56258,56421,56688,57071,57420,
#Partially deleted in new
chr20	58853262	58911192	chr20:58853262-58911192	0	+	58853262	58853262	8553170	14	2071,284,73,45,55,120,98,55,74,59,121,131,68,510,	0,38319,42349,45678,50268,50409,52120,55899,56087,56258,56421,56688,57071,57420,
#Deleted in new
chr20	58853455	58855333	chr20:58853455-58855333	1	+	58853455	58855333	789624	1	1878,	0,
#Partially deleted in new
chr20	58854168	58900410	chr20:58854168-58900410	0	+	58854168	58854168	8553170	6	1165,91,67,73,45,462,	0,1385,1978,41443,44772,45780,
#Deleted in new
chr20	58854940	58856213	chr20:58854940-58856213	0	+	58854940	58856213	789624	3	393,91,67,	0,613,1206,
#Partially deleted in new
chr20	58855106	58909183	chr20:58855106-58909183	0	+	58855106	58909183	789624	6	227,73,55,120,98,22,	0,40505,48424,48565,50276,54055,
#Partially deleted in new
chr20	58855146	58905480	chr20:58855146-58905480	0	+	58855146	58905480	789624	6	187,73,45,58,120,98,	0,40465,43794,48381,48525,50236,
#Partially deleted in new
chr20	58855177	58900410	chr20:58855177-58900410	0	+	58855177	58899955	789624	4	156,73,45,462,	0,40434,43763,44771,
#Partially deleted in new
chr20	58863527	58888792	chr20:58863527-58888792	3	-	58863527	58863527	789624	5	611,87,63,113,19,	0,3958,18208,19389,25246,
#Deleted in new
chr20	58876591	58876981	chr20:58876591-58876981	3	-	58876591	58876591	8553170	1	390,	0,
#Partially deleted in new
chr20	58881749	58888809	chr20:58881749-58888809	1	-	58881749	58881749	8553170	4	49,113,169,36,	0,1167,3097,7024,
#Deleted in new
chr20	58884404	58884981	chr20:58884404-58884981	1	-	58884404	58884404	8553170	1	577,	0,
#Deleted in new
chr20	58888412	58900410	chr20:58888412-58900410	0	+	58888412	58888412	789624	4	406,73,45,462,	0,7199,10528,11536,
#Partially deleted in new
chr20	58888778	58910401	chr20:58888778-58910401	0	+	58888778	58888778	8553170	11	40,73,58,120,98,55,74,59,121,131,68,	0,6833,14749,14893,16604,20383,20571,20742,20905,21172,21555,
#Partially deleted in new
chr20	58888848	58909804	chr20:58888848-58909804	0	+	58888848	58888848	8553170	10	56,73,45,55,120,98,55,74,59,121,	0,6763,10092,14682,14823,16534,20313,20501,20672,20835,
#Partially deleted in new
chr20	58888858	58909575	chr20:58888858-58909575	0	+	58888858	58888858	8553170	8	50,73,58,120,98,55,74,55,	0,6753,14669,14813,16524,20303,20491,20662,
#Partially deleted in new
chr20	58888892	58909579	chr20:58888892-58909579	0	+	58888892	58888892	8553170	9	154,73,45,55,120,98,55,74,59,	0,6719,10048,14638,14779,16490,20269,20457,20628,
#Partially deleted in new
chr20	58889099	58911192	chr20:58889099-58911192	0	+	58889099	58889099	8553170	13	254,73,45,55,120,98,55,74,59,121,131,68,510,	0,6512,9841,14431,14572,16283,20062,20250,20421,20584,20851,21234,21583,
#Partially deleted in new
chr20	58889123	58905420	chr20:58889123-58905420	0	+	58889123	58889123	8553170	5	426,73,58,120,38,	0,6488,14404,14548,16259,
#Partially deleted in new
chr20	58889143	58909804	chr20:58889143-58909804	0	+	58889143	58889143	8553170	10	210,73,45,58,120,98,55,74,59,121,	0,6468,9797,14384,14528,16239,20018,20206,20377,20540,
#Partially deleted in new
chr20	58889146	58909419	chr20:58889146-58909419	0	+	58889146	58889146	8553170	8	67,73,45,55,120,98,55,70,	0,6465,9794,14384,14525,16236,20015,20203,
#Partially deleted in new
chr20	58889150	58909216	chr20:58889150-58909216	0	+	58889150	58889150	8553170	7	256,73,45,55,120,98,55,	0,6461,9790,14380,14521,16232,20011,
#Partially deleted in new
chr20	58889159	58905480	chr20:58889159-58905480	0	+	58889159	58889159	8553170	5	194,73,58,120,98,	0,6452,14368,14512,16223,
#Partially deleted in new
chr20	58889159	58909423	chr20:58889159-58909423	0	+	58895649	58909423	789624	8	173,73,45,55,120,98,55,74,	0,6452,9781,14371,14512,16223,20002,20190,
#Partially deleted in new
chr20	58889170	58911179	chr20:58889170-58911179	0	+	58889170	58889170	8553170	12	183,73,55,120,98,55,74,59,121,131,68,497,	0,6441,14360,14501,16212,19991,20179,20350,20513,20780,21163,21512,
#Partially deleted in new
chr20	58889222	58909985	chr20:58889222-58909985	0	+	58889222	58889222	8553170	12	131,24,73,45,58,120,98,55,74,59,121,35,	0,303,6389,9718,14305,14449,16160,19939,20127,20298,20461,20728,
#Deleted in new
chr20	58889226	58900410	chr20:58889226-58900410	0	+	58889226	58889226	8553170	3	127,73,462,	0,6385,10722,
#Partially deleted in new
chr20	58890642	58903585	chr20:58890642-58903585	0	+	58890642	58890642	8553170	3	147,73,58,	0,4969,12885,
#Partially deleted in new
chr20	58891301	58911192	chr20:58891301-58911192	1	+	58891726	58910829	0	12	564,73,58,120,98,55,74,59,121,131,68,510,	0,4310,12226,12370,14081,17860,18048,18219,18382,18649,19032,19381,
#Partially deleted in new
chr20	58891302	58911192	chr20:58891302-58911192	1	+	58891726	58910829	0	13	563,73,45,58,120,98,55,74,59,121,131,68,510,	0,4309,7638,12225,12369,14080,17859,18047,18218,18381,18648,19031,19380,
#Partially deleted in new
chr20	58891302	58911192	chr20:58891302-58911192	1	+	58891726	58910829	0	13	563,73,45,55,120,98,55,74,59,121,131,68,510,	0,4309,7638,12228,12369,14080,17859,18047,18218,18381,18648,19031,19380,
#Partially deleted in new
chr20	58891363	58911192	chr20:58891363-58911192	1	+	58891726	58910829	0	12	502,73,55,120,98,55,74,59,121,131,68,510,	0,4248,12167,12308,14019,17798,17986,18157,18320,18587,18970,19319,
#Deleted in new
chr20	58891715	58900410	chr20:58891715-58900410	1	+	58891726	58899955	789624	4	150,73,45,462,	0,3896,7225,8233,
#Partially deleted in new
chr20	58891726	58910829	chr20:58891726-58910829	1	+	58891726	58910829	789624	5	93,38,131,68,147,	0,18040,18224,18607,18956,
#Deleted in new
chr20	58891759	58900410	chr20:58891759-58900410	0	+	58891759	58899955	789624	3	106,73,462,	0,3852,8189,
#Partially deleted in new
chr20	58891980	58909974	chr20:58891980-58909974	0	+	58891980	58891980	8553170	11	229,73,45,55,120,98,55,74,59,121,24,	0,3631,6960,11550,11691,13402,17181,17369,17540,17703,17970,
#Partially deleted in new
chr20	58892036	58909804	chr20:58892036-58909804	0	+	58892036	58892036	8553170	9	173,73,55,120,98,55,74,59,121,	0,3575,11494,11635,13346,17125,17313,17484,17647,
#Partially deleted in new
chr20	58892077	58909804	chr20:58892077-58909804	0	+	58892077	58892077	8553170	9	132,73,58,120,98,55,74,59,121,	0,3534,11450,11594,13305,17084,17272,17443,17606,
#Partially deleted in new
chr20	58892332	58909169	chr20:58892332-58909169	0	+	58895649	58909169	789624	7	174,73,45,55,120,98,8,	0,3279,6608,11198,11339,13050,16829,
#Partially deleted in new
chr20	58895162	58903556	chr20:58895162-58903556	0	+	58895162	58895162	8553170	3	522,45,26,	0,3778,8368,
#Partially deleted in new
chr20	58895196	58911192	chr20:58895196-58911192	0	+	58895196	58895196	8553170	11	488,58,120,98,55,74,59,121,131,68,510,	0,8331,8475,10186,13965,14153,14324,14487,14754,15137,15486,
#Partially deleted in new
chr20	58897439	58911192	chr20:58897439-58911192	0	+	58897439	58897439	8553170	11	1546,55,120,98,55,74,59,121,131,68,510,	0,6091,6232,7943,11722,11910,12081,12244,12511,12894,13243,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	58902980	58911190	chr20:58902980-58911190	0	+	58902980	58902980	8553170	10	605,120,98,55,74,59,121,131,68,508,	0,691,2402,6181,6369,6540,6703,6970,7353,7702,
#Partially deleted in new
chr20	58903530	58910365	chr20:58903530-58910365	0	+	58903530	58903530	8553170	6	55,120,98,121,131,32,	0,141,1852,6153,6420,6803,
#Partially deleted in new
chr20	58903536	58909712	chr20:58903536-58909712	0	+	58903536	58903536	8553170	6	49,120,98,55,230,29,	0,135,1846,5625,5813,6147,
#Partially deleted in new
chr20	58903740	58909776	chr20:58903740-58909776	0	+	58903740	58903740	8553170	5	51,98,55,74,256,	0,1642,5421,5609,5780,
#Deleted in new
chr20	58908915	58909715	chr20:58908915-58909715	0	+	58908915	58908915	8553170	4	301,74,59,32,	0,434,605,768,
#Deleted in new
chr20	58910007	58910781	chr20:58910007-58910781	0	+	58910007	58910007	8553170	2	394,99,	0,675,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	58915999	58981169	chr20:58915999-58981169	3	-	58915999	58915999	8553170	5	361,169,194,71,1130,	0,28989,32660,46088,64040,
#Partially deleted in new
chr20	58948088	58948267	chr20:58948088-58948267	7	-	58948088	58948088	16724991	1	179,	0,
#Partially deleted in new
chr20	58981207	58995133	chr20:58981207-58995133	3	+	58981255	58994676	789624	15	162,116,110,110,108,153,131,166,135,140,115,96,141,130,492,	0,4885,5546,6500,7706,8280,8650,9702,10104,10673,11790,12241,12416,12902,13434,
#Partially deleted in new
chr20	58981251	58987421	chr20:58981251-58987421	0	+	58981251	58981251	8553170	3	118,116,668,	0,4841,5502,
#Partially deleted in new
chr20	58981251	58987969	chr20:58981251-58987969	0	+	58981251	58981251	8553170	4	118,116,110,262,	0,4841,5502,6456,
#Partially deleted in new
chr20	58981274	58995133	chr20:58981274-58995133	0	+	58981274	58994676	789624	16	95,116,110,110,108,153,131,166,135,140,115,96,141,130,183,208,	0,4818,5479,6433,7639,8213,8583,9635,10037,10606,11723,12174,12349,12835,13367,13651,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	58981274	58986761	chr20:58981274-58986761	0	+	58981274	58981274	8553170	2	95,669,	0,4818,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	58981274	58990400	chr20:58981274-58990400	0	+	58981274	58981274	8553170	6	95,116,110,110,727,543,	0,4818,5479,6433,7639,8583,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	58987709	58995133	chr20:58987709-58995133	0	+	58987709	58987709	8553170	12	108,108,153,375,166,135,140,115,96,52,130,492,	0,1204,1778,2148,3200,3602,4171,5288,5739,5914,6400,6932,
#Partially deleted in new
chr20	58989018	58995133	chr20:58989018-58995133	0	+	58989018	58989018	8553170	10	3,153,131,166,135,140,115,96,616,492,	0,469,839,1891,2293,2862,3979,4430,4605,5623,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	58990094	58995133	chr20:58990094-58995133	0	+	58990094	58990094	8553170	4	1926,547,616,492,	0,2903,3529,4547,
#Partially deleted in new
chr20	58990895	58993544	chr20:58990895-58993544	0	+	58990895	58990895	8553170	5	180,135,140,115,96,	0,416,985,2102,2553,
#Deleted in new
chr20	58991036	58991922	chr20:58991036-58991922	0	+	58991036	58991036	8553170	2	39,611,	0,275,
#Partially deleted in new
chr20	58991311	58995133	chr20:58991311-58995133	0	+	58991311	58991311	8553170	7	135,140,115,96,52,82,492,	0,569,1686,2137,2312,2798,3330,
#Partially deleted in new
chr20	58993922	58995133	chr20:58993922-58995133	0	+	58993922	58993922	8553170	3	317,183,208,	0,719,1003,
#Partially deleted in new
chr20	58995184	59007247	chr20:58995184-59007247	3	-	58995648	59007128	0	6	575,163,151,180,164,262,	0,1454,2418,6280,11137,11801,
#Partially deleted in new
chr20	58996586	59007230	chr20:58996586-59007230	0	-	58996586	58996586	8553170	5	215,151,180,164,245,	0,1016,4878,9735,10399,
#Partially deleted in new
chr20	58997391	59006426	chr20:58997391-59006426	0	-	58997391	58997391	8553170	3	362,180,105,	0,4073,8930,
#Deleted in new
chr20	59006041	59007105	chr20:59006041-59007105	0	-	59006041	59006041	8553170	2	444,120,	0,944,
#Partially deleted in new
chr20	59019253	59026654	chr20:59019253-59026654	3	+	59019522	59024783	789624	4	326,109,111,2950,	0,3591,4236,4451,
#Deleted in new
chr20	59025466	59032382	chr20:59025466-59032382	3	-	59030305	59032251	789624	3	3375,127,163,	0,4836,6753,
#Deleted in new
chr20	59025972	59032292	chr20:59025972-59032292	1	-	59030305	59032251	789624	3	497,127,73,	0,4330,6247,
#Deleted in new
chr20	59028677	59032345	chr20:59028677-59032345	1	-	59030305	59032251	789624	2	1752,126,	0,3542,
#Partially deleted in new
chr20	59033144	59042909	chr20:59033144-59042909	3	-	59035006	59042730	789624	6	1982,103,71,90,169,211,	0,3326,3545,4046,5321,9554,
#Partially deleted in new
chr20	59034633	59042805	chr20:59034633-59042805	1	-	59035006	59042730	789624	5	493,103,71,169,107,	0,1837,2056,3832,8065,
#Partially deleted in new
chr20	59034908	59042732	chr20:59034908-59042732	0	-	59037293	59042730	789624	6	218,103,71,109,169,34,	0,1562,1781,2282,3557,7790,
#Partially deleted in new
chr20	59038133	59042809	chr20:59038133-59042809	0	-	59038133	59038133	8553170	2	501,111,	0,4565,
#Deleted in new
chr20	59113223	59113631	chr20:59113223-59113631	7	+	59113223	59113223	16724991	1	408,	0,
#Partially deleted in new
chr20	59123380	59259113	chr20:59123380-59259113	3	+	59191019	59254743	789624	8	125,144,1244,3774,137,152,161,5216,	0,22850,36271,67603,72488,83524,129597,130517,
#Partially deleted in new
chr20	59123403	59147026	chr20:59123403-59147026	0	+	59123403	59123403	8553170	2	102,796,	0,22827,
#Partially deleted in new
chr20	59191019	59259110	chr20:59191019-59259110	1	+	59191019	59254743	789624	5	3738,137,152,161,5213,	0,4849,15885,61958,62878,
#Partially deleted in new
chr20	59300426	59325992	chr20:59300426-59325992	3	+	59300812	59324459	789624	5	438,313,177,46,1662,	0,983,20590,21945,23904,
#Partially deleted in new
chr20	59300442	59325992	chr20:59300442-59325992	1	+	59300812	59324367	789624	5	422,313,177,81,1662,	0,967,20574,21929,23888,
#Partially deleted in new
chr20	59300443	59325991	chr20:59300443-59325991	1	+	59300812	59324459	789624	6	421,313,177,46,144,1296,	0,966,20573,21928,23887,24252,
#Partially deleted in new
chr20	59300546	59325962	chr20:59300546-59325962	1	+	59300812	59323674	789624	6	318,313,177,46,58,1632,	0,863,20470,21825,23119,23784,
#Partially deleted in new
chr20	59300617	59324746	chr20:59300617-59324746	1	+	59300812	59324367	789624	4	247,313,177,416,	0,792,20399,23713,
#Partially deleted in new
chr20	59300702	59325992	chr20:59300702-59325992	1	+	59300812	59324459	789624	4	162,313,177,1666,	0,707,20314,23624,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	59352194	59357774	chr20:59352194-59357774	3	-	59352194	59352194	8553170	2	127,466,	0,5114,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	59360926	59364773	chr20:59360926-59364773	3	-	59360926	59360926	8553170	2	465,155,	0,3692,
#Deleted in new
chr20	59460618	59460837	chr20:59460618-59460837	7	-	59460618	59460618	16724991	1	219,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	59515190	59516039	chr20:59515190-59516039	3	+	59515190	59515190	8553170	2	143,423,	0,426,
#Partially deleted in new
chr20	59577508	59847711	chr20:59577508-59847711	1	+	59577508	59847130	789624	13	109,162,78,183,210,175,248,154,56,62,141,77,597,	0,165598,170249,177673,189677,195770,196734,228532,258996,262860,263886,267680,269606,
#Partially deleted in new
chr20	59603504	59743113	chr20:59603504-59743113	0	+	59605014	59743113	789624	4	102,229,201,7,	0,212,1427,139602,
#Partially deleted in new
chr20	59604547	59847711	chr20:59604547-59847711	3	+	59605014	59847130	789624	13	585,162,78,183,210,175,248,154,56,62,141,77,597,	0,138559,143210,150634,162638,168731,169695,201493,231957,235821,236847,240641,242567,
#Partially deleted in new
chr20	59626463	59628279	chr20:59626463-59628279	3	-	59626463	59626463	789624	2	486,182,	0,1634,
#Partially deleted in new
chr20	59626480	59628289	chr20:59626480-59628289	0	-	59626480	59626480	8553170	2	469,196,	0,1613,
#Partially deleted in new
chr20	59628608	59847709	chr20:59628608-59847709	1	+	59743111	59847130	789624	13	208,162,78,183,210,175,248,154,56,62,141,77,595,	0,114498,119149,126573,138577,144670,145634,177432,207896,211760,212786,216580,218506,
#Partially deleted in new
chr20	59676660	59847711	chr20:59676660-59847711	1	+	59743111	59847130	789624	13	104,162,78,183,210,175,248,154,56,62,141,77,597,	0,66446,71097,78521,90525,96618,97582,129380,159844,163708,164734,168528,170454,
#Partially deleted in new
chr20	59721209	59847711	chr20:59721209-59847711	1	+	59743111	59847130	789624	12	229,162,78,183,175,248,154,56,62,141,77,597,	0,21897,26548,33972,52069,53033,84831,115295,119159,120185,123979,125905,
#Partially deleted in new
chr20	59721209	59847711	chr20:59721209-59847711	1	+	59743111	59847130	789624	13	229,162,78,183,210,175,248,154,56,62,141,77,597,	0,21897,26548,33972,45976,52069,53033,84831,115295,119159,120185,123979,125905,
#Partially deleted in new
chr20	59835852	59847711	chr20:59835852-59847711	0	+	59835852	59835852	8553170	5	708,62,141,77,597,	0,4516,5542,9336,11262,
#Deleted in new
chr20	59843454	59847711	chr20:59843454-59847711	0	+	59843454	59843454	8553170	2	1811,597,	0,3660,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	59852666	59852728	chr20:59852666-59852728	3	-	59852666	59852666	8553170	1	62,	0,
#Partially deleted in new
chr20	59863562	59933655	chr20:59863562-59933655	3	-	59864310	59922413	789624	45	826,57,79,59,100,95,137,156,91,186,206,199,171,38,169,58,56,58,71,37,128,437,134,58,70,161,100,147,75,149,61,96,46,53,143,35,86,86,25,105,129,144,70,93,87,	0,1825,2010,2244,2730,2932,4148,4850,5272,6235,10293,11708,13822,14445,16740,17403,17874,18382,18532,22365,23144,28427,29005,29579,29961,31874,32866,36575,37181,38099,43801,48187,48810,50412,50546,51602,51902,52923,55595,55930,56796,57747,58827,68499,70006,
#Partially deleted in new
chr20	59863563	59932154	chr20:59863563-59932154	1	-	59864310	59922413	789624	44	825,57,79,59,100,95,137,156,91,186,206,199,171,38,169,58,56,58,71,37,128,437,134,58,70,161,100,147,75,149,61,96,46,53,143,35,86,86,25,105,129,144,70,93,	0,1824,2009,2243,2729,2931,4147,4849,5271,6234,10292,11707,13821,14444,16739,17402,17873,18381,18531,22364,23143,28426,29004,29578,29960,31873,32865,36574,37180,38098,43800,48186,48809,50411,50545,51601,51901,52922,55594,55929,56795,57746,58826,68498,
#Deleted in new
chr20	59864336	59868880	chr20:59864336-59868880	0	-	59864336	59868880	789624	8	52,57,79,59,100,95,137,46,	0,1051,1236,1470,1956,2158,3374,4498,
#Partially deleted in new
chr20	59877463	59933361	chr20:59877463-59933361	0	-	59877463	59922413	789624	33	92,38,169,58,56,58,71,37,128,437,134,58,70,161,100,147,75,149,61,96,46,53,143,35,86,86,25,105,129,144,70,93,131,	0,544,2839,3502,3973,4481,4631,8464,9243,14526,15104,15678,16060,17973,18965,22674,23280,24198,29900,34286,34909,36511,36645,37701,38001,39022,41694,42029,42895,43846,44926,54598,55767,
#Partially deleted in new
chr20	59880318	59886811	chr20:59880318-59886811	0	-	59880318	59880318	8553170	8	153,58,56,58,71,42,37,105,	0,647,1118,1626,1776,4784,5609,6388,
#Partially deleted in new
chr20	59900776	59912226	chr20:59900776-59912226	0	-	59900776	59900776	8553170	4	42,149,61,477,	0,885,6587,10973,
#Partially deleted in new
chr20	59911768	59915689	chr20:59911768-59915689	0	-	59911768	59911768	8553170	6	77,46,53,143,35,225,	0,604,2206,2340,3396,3696,
#Deleted in new
chr20	59919316	59921483	chr20:59919316-59921483	0	-	59919316	59919316	8553170	3	281,129,174,	0,1042,1993,
#Partially deleted in new
chr20	59919536	59933655	chr20:59919536-59933655	0	-	59919536	59922413	789624	5	61,129,141,70,87,	0,822,1773,2853,14032,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	59933763	59948680	chr20:59933763-59948680	3	+	59943943	59945095	789624	5	90,123,112,86,4741,	0,4226,8434,8663,10176,
#Deleted in new
chr20	59936667	59940297	chr20:59936667-59940297	3	-	59939031	59939931	789624	1	3630,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	59940438	59948680	chr20:59940438-59948680	1	+	59943943	59945095	789624	4	97,112,86,4741,	0,1759,1988,3501,
#Deleted in new
chr20	59940458	59945000	chr20:59940458-59945000	0	+	59940458	59940458	8553170	4	77,112,86,605,	0,1739,1968,3937,
#Deleted in new
chr20	59942123	59944086	chr20:59942123-59944086	0	+	59943943	59944086	789624	3	186,86,147,	0,303,1816,
#Partially deleted in new
chr20	59958426	60013113	chr20:59958426-60013113	3	+	59958726	60012730	789624	18	369,57,105,162,148,167,129,186,260,143,240,222,131,78,69,54,75,587,	0,10540,11655,13535,24496,26212,26574,29026,30477,33951,35823,37406,38204,41159,42916,44386,48286,54100,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	59986013	59989153	chr20:59986013-59989153	0	+	59986013	59986013	8553170	3	161,186,250,	0,1439,2890,
#Partially deleted in new
chr20	59989105	60034011	chr20:59989105-60034011	0	+	59989105	60033676	789624	9	58,143,240,222,131,78,75,196,526,	0,3272,5144,6727,7525,10480,17607,42125,44380,
#Partially deleted in new
chr20	59994207	60013113	chr20:59994207-60013113	0	+	59994207	59994207	8553170	7	282,222,131,78,54,75,587,	0,1625,2423,5378,8605,12505,18319,
#Partially deleted in new
chr20	59996363	60014079	chr20:59996363-60014079	1	+	59996570	60012730	789624	4	225,78,75,1553,	0,3222,10349,16163,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	59996373	60014529	chr20:59996373-60014529	1	+	59996570	60012730	789624	6	215,78,69,54,75,2003,	0,3212,4969,6439,10339,16153,
#Partially deleted in new
chr20	59996393	60012542	chr20:59996393-60012542	0	+	59996570	60012542	789624	5	195,78,54,75,16,	0,3192,6419,10319,16133,
#Partially deleted in new
chr20	60055924	60072953	chr20:60055924-60072953	3	+	60055924	60055924	8553170	4	84,80,211,2357,	0,2982,13908,14672,
#Partially deleted in new
chr20	60055950	60057917	chr20:60055950-60057917	0	+	60055950	60055950	789624	2	58,588,	0,1379,
#Deleted in new
chr20	60083359	60083872	chr20:60083359-60083872	3	-	60083359	60083359	8553170	1	513,	0,
#Partially deleted in new
chr20	60087839	60101372	chr20:60087839-60101372	1	+	60087839	60087839	789624	5	161,125,35,49,281,	0,757,11089,12331,13252,
#Partially deleted in new
chr20	60087856	60101372	chr20:60087856-60101372	0	+	60087856	60087856	8553170	3	144,49,278,	0,12314,13238,
#Partially deleted in new
chr20	60087863	60246129	chr20:60087863-60246129	1	+	60087863	60087863	8553170	8	137,125,150,64,94,115,81,92,	0,733,29494,29880,33164,35628,35916,158174,
#Partially deleted in new
chr20	60087887	60180913	chr20:60087887-60180913	0	+	60087887	60087887	8553170	6	113,104,49,94,95,79,	0,11041,12283,33140,66519,92947,
#Partially deleted in new
chr20	60087947	60101372	chr20:60087947-60101372	0	+	60087947	60087947	8553170	4	53,35,49,278,	0,10981,12223,13147,
#Partially deleted in new
chr20	60088638	60101372	chr20:60088638-60101372	0	+	60088638	60088638	8553170	4	83,35,49,278,	0,10290,11532,12456,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	60138491	60322256	chr20:60138491-60322256	3	+	60138491	60138491	789624	5	153,100,79,87,1624,	0,15915,42343,180429,182141,
#Partially deleted in new
chr20	60180877	60527458	chr20:60180877-60527458	0	+	60180877	60180877	8553170	5	36,78,87,226,72,	0,132432,138043,139755,346509,
#Partially deleted in new
chr20	60180878	60331584	chr20:60180878-60331584	0	+	60180878	60180878	8553170	3	35,78,712,	0,132431,149994,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	60180887	60250002	chr20:60180887-60250002	1	+	60180887	60180887	8553170	4	26,135,135,509,	0,65905,66667,68606,
#Deleted in new
chr20	60308473	60308567	chr20:60308473-60308567	3	+	60308473	60308473	5263520	1	94,	0,
#Partially deleted in new
chr20	60414395	60414872	chr20:60414395-60414872	7	-	60414395	60414395	16724991	1	477,	0,
#Deleted in new
chr20	60478110	60478181	chr20:60478110-60478181	3	+	60478110	60478110	5263520	1	71,	0,
#Deleted in new
chr20	60564561	60564625	chr20:60564561-60564625	3	+	60564561	60564561	5263520	1	64,	0,
#Deleted in new
chr20	60761873	60767279	chr20:60761873-60767279	3	+	60761873	60761873	8553170	4	121,201,79,58,	0,413,2979,5348,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	60812003	60814211	chr20:60812003-60814211	3	-	60812003	60812003	8553170	1	2208,	0,
#Deleted in new
chr20	61077223	61077816	chr20:61077223-61077816	3	-	61077223	61077223	8553170	2	393,107,	0,486,
#Deleted in new
chr20	61079139	61080179	chr20:61079139-61080179	3	+	61079139	61079139	789624	2	191,200,	0,840,
#Partially deleted in new
chr20	61252425	61940617	chr20:61252425-61940617	3	+	61252513	61936943	789624	16	145,112,227,180,156,145,173,138,186,254,143,234,234,140,165,3881,	0,2400,491137,520577,592242,600328,621302,642484,657996,671025,671908,675764,677183,680559,681630,684311,
#Deleted in new
chr20	61369878	61370855	chr20:61369878-61370855	3	+	61369878	61369878	8553170	1	977,	0,
#Partially deleted in new
chr20	61434624	61437367	chr20:61434624-61437367	0	-	61434624	61434624	8553170	2	251,327,	0,2416,
#Partially deleted in new
chr20	61435638	61437547	chr20:61435638-61437547	3	-	61435638	61435638	8553170	2	156,507,	0,1402,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	61436498	61437541	chr20:61436498-61437541	0	-	61436498	61436498	8553170	2	107,501,	0,542,
#Partially deleted in new
chr20	61570134	61937218	chr20:61570134-61937218	1	+	61570694	61936943	789624	15	609,65,180,156,145,173,138,186,254,143,234,234,140,165,482,	0,173428,202868,274533,282619,303593,324775,340287,353316,354199,358055,359474,362850,363921,366602,
#Partially deleted in new
chr20	61599760	61937249	chr20:61599760-61937249	1	+	61743615	61936943	789624	15	229,227,180,156,145,173,138,186,254,143,234,234,140,165,513,	0,143802,173242,244907,252993,273967,295149,310661,323690,324573,328429,329848,333224,334295,336976,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	61717505	61719748	chr20:61717505-61719748	3	-	61717505	61717505	789624	2	1881,119,	0,2124,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	61738218	61755056	chr20:61738218-61755056	3	-	61738218	61738218	8553170	2	872,65,	0,16773,
#Partially deleted in new
chr20	61953468	61998187	chr20:61953468-61998187	0	-	61953762	61998187	789624	3	360,120,52,	0,44081,44667,
#Deleted in new
chr20	61953545	61953662	chr20:61953545-61953662	3	-	61953545	61953545	5263520	1	117,	0,
#Partially deleted in new
chr20	61974797	62065810	chr20:61974797-62065810	3	-	61976167	62065810	0	15	1538,120,57,126,131,170,115,148,249,90,123,120,120,161,1360,	0,22752,23338,24185,25326,25754,28362,28933,31712,32749,34254,35248,38017,39749,89653,
#Partially deleted in new
chr20	61975356	62008187	chr20:61975356-62008187	0	-	61975356	61975356	8553170	11	979,120,57,126,131,170,115,148,249,90,255,	0,22193,22779,23626,24767,25195,27803,28374,31153,32190,32576,
#Deleted in new
chr20	61975858	61981432	chr20:61975858-61981432	0	-	61975858	61975858	8553170	3	477,365,1305,	0,3078,4269,
#Partially deleted in new
chr20	62000567	62007561	chr20:62000567-62007561	0	-	62000567	62007561	789624	5	154,115,148,213,15,	0,2592,3163,5978,6979,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	62004508	62006995	chr20:62004508-62006995	0	-	62004508	62004508	8553170	1	2487,	0,
#Deleted in new
chr20	62008850	62010133	chr20:62008850-62010133	0	-	62008850	62008850	8553170	2	324,88,	0,1195,
#Deleted in new
chr20	62010066	62012883	chr20:62010066-62012883	0	-	62010066	62010066	8553170	4	99,276,118,69,	0,2037,2415,2748,
#Partially deleted in new
chr20	62012873	62064366	chr20:62012873-62064366	0	-	62012873	62012873	8553170	3	61,161,62,	0,1673,51431,
#Deleted in new
chr20	62037428	62037956	chr20:62037428-62037956	7	-	62037428	62037428	16724991	1	528,	0,
#Deleted in new
chr20	62064801	62064885	chr20:62064801-62064885	3	+	62064801	62064801	5263520	1	84,	0,
#Deleted in new
chr20	62066829	62068437	chr20:62066829-62068437	3	+	62066829	62066829	8553170	1	1608,	0,
#Partially deleted in new
chr20	62122460	62128030	chr20:62122460-62128030	1	+	62122666	62127823	789624	4	333,164,136,446,	0,2156,3843,5124,
#Partially deleted in new
chr20	62122481	62130666	chr20:62122481-62130666	0	+	62122666	62130666	789624	6	312,164,214,168,78,137,	0,2135,3744,7303,7737,8048,
#Partially deleted in new
chr20	62122506	62135378	chr20:62122506-62135378	3	+	62122666	62133461	789624	9	287,164,136,168,78,162,151,186,1216,	0,2110,3797,7278,7712,8023,8849,10783,11656,
#Partially deleted in new
chr20	62122526	62130605	chr20:62122526-62130605	0	+	62122666	62130605	789624	5	267,164,136,168,76,	0,2090,3777,7258,8003,
#Partially deleted in new
chr20	62123151	62131506	chr20:62123151-62131506	0	+	62126369	62131506	789624	8	263,164,136,117,168,78,162,151,	0,1465,3152,4433,6633,7067,7378,8204,
#Partially deleted in new
chr20	62136734	62143430	chr20:62136734-62143430	3	-	62136856	62143303	0	7	215,63,120,123,125,127,223,	0,629,1436,2340,3046,4083,6473,
#Partially deleted in new
chr20	62136734	62139905	chr20:62136734-62139905	0	-	62136856	62139905	789624	5	215,102,120,123,125,	0,629,1436,2340,3046,
#Partially deleted in new
chr20	62136802	62143440	chr20:62136802-62143440	0	-	62136802	62136802	8553170	7	147,63,120,123,210,127,233,	0,561,1368,2272,2893,4015,6405,
#Partially deleted in new
chr20	62136856	62142596	chr20:62136856-62142596	1	-	62136856	62140830	0	7	93,63,120,123,125,127,122,	0,507,1314,2218,2924,3961,5618,
#Partially deleted in new
chr20	62136906	62139396	chr20:62136906-62139396	0	-	62136906	62136906	8553170	4	43,63,120,322,	0,457,1264,2168,
#Partially deleted in new
chr20	62139330	62143430	chr20:62139330-62143430	1	-	62139678	62143303	0	3	575,127,223,	0,1487,3877,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	62143794	62182484	chr20:62143794-62182484	3	+	62143820	62179208	789624	11	95,77,85,145,180,165,102,93,120,128,3303,	0,14877,16082,17641,18957,19663,20350,21627,28887,30722,35387,
#Partially deleted in new
chr20	62143794	62161580	chr20:62143794-62161580	0	+	62158787	62161580	789624	5	95,185,271,85,145,	0,10486,14877,16082,17641,
#Partially deleted in new
chr20	62161417	62180280	chr20:62161417-62180280	1	+	62161450	62179208	789624	9	163,180,165,102,93,120,128,175,112,	0,1334,2040,2727,4004,11264,13099,17764,18751,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	62162547	62163529	chr20:62162547-62163529	0	+	62162547	62162547	8553170	2	384,72,	0,910,
#Partially deleted in new
chr20	62163457	62180284	chr20:62163457-62180284	0	+	62163457	62179208	789624	7	165,102,93,120,128,175,116,	0,687,1964,9224,11059,15724,16711,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	62183028	62194053	chr20:62183028-62194053	0	+	62183028	62183028	8553170	2	29,638,	0,10387,
#Partially deleted in new
chr20	62183041	62198263	chr20:62183041-62198263	0	+	62183041	62183041	8553170	4	16,209,148,412,	0,10374,12760,14810,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	62183043	62202767	chr20:62183043-62202767	0	+	62193420	62198701	789624	6	14,209,148,219,139,2085,	0,10372,12758,15590,16075,17639,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	62183044	62202767	chr20:62183044-62202767	3	+	62193420	62201077	789624	7	13,209,148,116,219,139,2085,	0,10371,12757,14807,15589,16074,17638,
#Partially deleted in new
chr20	62183050	62199130	chr20:62183050-62199130	0	+	62193420	62199130	789624	7	7,16,209,148,116,219,12,	0,5739,10365,12751,14801,15583,16068,
#Partially deleted in new
chr20	62193530	62200751	chr20:62193530-62200751	0	+	62193530	62193530	8553170	5	94,148,116,139,69,	0,2271,4321,5588,7152,
#Partially deleted in new
chr20	62193597	62200204	chr20:62193597-62200204	0	+	62193597	62193597	8553170	6	27,148,116,219,139,156,	0,2204,4254,5036,5521,6451,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	62197214	62198853	chr20:62197214-62198853	0	+	62197214	62197214	8553170	2	753,220,	0,1419,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	62198677	62200266	chr20:62198677-62200266	0	+	62198677	62198677	8553170	3	175,165,298,	0,441,1291,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	62202738	62203568	chr20:62202738-62203568	0	+	62202738	62202738	8553170	2	105,485,	0,345,
#Deleted in new
chr20	62214969	62220255	chr20:62214969-62220255	3	-	62216005	62219970	789624	3	1957,167,535,	0,3521,4751,
#Deleted in new
chr20	62215378	62220267	chr20:62215378-62220267	1	-	62215378	62219970	789624	5	28,273,404,167,547,	0,631,1144,3112,4342,
#Deleted in new
chr20	62216331	62220267	chr20:62216331-62220267	1	-	62216331	62219970	789624	4	95,91,167,547,	0,504,2159,3389,
#Deleted in new
chr20	62231921	62236299	chr20:62231921-62236299	0	+	62231921	62231921	8553170	3	2062,358,828,	0,3084,3550,
#Partially deleted in new
chr20	62234977	62260011	chr20:62234977-62260011	0	+	62256184	62260011	789624	3	386,165,31,	0,21079,25003,
#Partially deleted in new
chr20	62236917	62279205	chr20:62236917-62279205	0	+	62256184	62279205	789624	7	86,165,145,76,135,98,49,	0,19139,23063,26698,35207,36391,42239,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	62238484	62296213	chr20:62238484-62296213	3	+	62256184	62293887	789624	14	113,165,145,76,135,98,183,108,90,124,129,124,91,2429,	0,17572,21496,25131,33640,34824,40672,42573,43305,45561,48098,50722,53218,55300,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	62238484	62296213	chr20:62238484-62296213	1	+	62272142	62293957	789624	13	113,165,145,76,135,98,183,108,90,124,129,91,2429,	0,17572,21496,25131,33640,34824,40672,42573,43305,45561,48098,53218,55300,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr20	62238504	62295950	chr20:62238504-62295950	0	+	62256184	62286450	789624	15	93,165,145,76,135,98,183,108,90,124,152,129,124,91,2166,	0,17552,21476,25111,33620,34804,40652,42553,43285,45541,47832,48078,50702,53198,55280,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	62238520	62296211	chr20:62238520-62296211	1	+	62256184	62293887	789624	14	77,165,109,76,135,98,183,108,90,124,129,124,91,2427,	0,17536,21496,25095,33604,34788,40636,42537,43269,45525,48062,50686,53182,55264,
#Partially deleted in new
chr20	62238520	62273406	chr20:62238520-62273406	0	+	62256184	62273406	789624	7	77,341,165,145,76,135,98,	0,3800,17536,21460,25095,33604,34788,
#Partially deleted in new
chr20	62238523	62294201	chr20:62238523-62294201	1	+	62272142	62293957	789624	13	74,165,76,90,135,98,183,108,90,124,129,91,417,	0,17533,25092,26105,33601,34785,40633,42534,43266,45522,48059,53179,55261,
#Partially deleted in new
chr20	62238541	62294865	chr20:62238541-62294865	0	+	62256184	62280066	789624	14	56,165,145,76,135,98,183,114,822,124,129,124,91,1081,	0,17515,21439,25074,33583,34767,40615,41467,42516,45504,48041,50665,53161,55243,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr20	62238548	62294860	chr20:62238548-62294860	0	+	62256184	62285652	789624	16	49,165,145,76,135,98,183,108,90,124,682,152,129,124,91,1076,	0,17508,21432,25067,33576,34760,40608,42509,43241,45497,46987,47788,48034,50658,53154,55236,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr20	62238552	62296203	chr20:62238552-62296203	0	+	62256184	62271681	789624	15	45,165,145,76,98,135,98,183,108,90,124,129,124,91,2419,	0,17504,21428,25063,33081,33572,34756,40604,42505,43237,45493,48030,50654,53150,55232,
#Partially deleted in new
chr20	62238552	62294865	chr20:62238552-62294865	1	+	62263634	62293887	789624	13	45,165,76,135,98,183,108,90,124,129,124,91,1081,	0,17504,25063,33572,34756,40604,42505,43237,45493,48030,50654,53150,55232,
#Partially deleted in new
chr20	62238560	62294865	chr20:62238560-62294865	0	+	62272142	62293887	789624	13	37,91,15,135,98,183,108,90,124,129,124,91,1081,	0,17496,25116,33564,34748,40596,42497,43229,45485,48022,50646,53142,55224,
#Partially deleted in new
chr20	62238563	62294851	chr20:62238563-62294851	1	+	62256184	62293887	789624	15	34,114,165,145,76,135,98,183,108,90,124,129,124,91,1067,	0,3757,17493,21417,25052,33561,34745,40593,42494,43226,45482,48019,50643,53139,55221,
#Partially deleted in new
chr20	62238563	62259222	chr20:62238563-62259222	0	+	62238563	62238563	8553170	3	34,165,269,	0,17493,20390,
#Partially deleted in new
chr20	62238563	62294860	chr20:62238563-62294860	0	+	62256184	62273402	789624	12	34,165,112,98,183,108,90,124,129,124,91,1076,	0,17493,21417,34745,40593,42494,43226,45482,48019,50643,53139,55221,
#Partially deleted in new
chr20	62238563	62294873	chr20:62238563-62294873	0	+	62256184	62279243	789624	12	34,165,145,76,183,108,90,124,129,124,91,1089,	0,17493,21417,25052,40593,42494,43226,45482,48019,50643,53139,55221,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	62238573	62296158	chr20:62238573-62296158	0	+	62256184	62279343	789624	13	24,165,145,76,135,98,363,822,124,129,124,91,2374,	0,17483,21407,25042,33551,34735,40583,42484,45472,48009,50633,53129,55211,
#Partially deleted in new
chr20	62238589	62294856	chr20:62238589-62294856	1	+	62260039	62293887	789624	13	8,145,76,135,98,183,108,90,124,129,124,91,1072,	0,21391,25026,33535,34719,40567,42468,43200,45456,47993,50617,53113,55195,
#Partially deleted in new
chr20	62238948	62282091	chr20:62238948-62282091	1	+	62256184	62281883	789624	9	117,165,145,76,135,98,183,108,302,	0,17108,21032,24667,33176,34360,40208,42109,42841,
#Partially deleted in new
chr20	62260086	62294865	chr20:62260086-62294865	0	+	62260086	62293805	789624	13	39,76,135,98,183,108,90,124,129,124,100,91,1081,	0,3529,12038,13222,19070,20971,21703,23959,26496,29120,31158,31616,33698,
#Partially deleted in new
chr20	62273308	62282093	chr20:62273308-62282093	0	+	62273308	62273308	8553170	4	98,183,108,304,	0,5848,7749,8481,
#Partially deleted in new
chr20	62273362	62280221	chr20:62273362-62280221	0	+	62273362	62279343	789624	3	44,193,213,	0,5794,6646,
#Deleted in new
chr20	62278275	62282092	chr20:62278275-62282092	0	+	62278275	62278275	8553170	2	1064,1035,	0,2782,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	62279113	62286449	chr20:62279113-62286449	0	+	62279113	62279113	8553170	4	236,108,90,2404,	0,1944,2676,4932,
#Partially deleted in new
chr20	62291561	62294114	chr20:62291561-62294114	0	+	62291561	62291561	8553170	2	232,330,	0,2223,
#Deleted in new
chr20	62302092	62308862	chr20:62302092-62308862	3	+	62303568	62308761	0	11	50,154,214,117,124,87,82,233,158,103,208,	0,803,1475,2368,4104,4555,5278,5503,5928,6275,6562,
#Deleted in new
chr20	62302895	62308860	chr20:62302895-62308860	1	+	62303568	62308761	0	10	154,214,117,124,87,82,233,158,103,206,	0,672,1565,3301,3752,4475,4700,5125,5472,5759,
#Deleted in new
chr20	62302895	62308860	chr20:62302895-62308860	1	+	62303568	62308761	789624	9	154,214,124,87,82,233,158,103,206,	0,672,3301,3752,4475,4700,5125,5472,5759,
#Deleted in new
chr20	62303257	62306734	chr20:62303257-62306734	0	+	62303568	62306734	789624	3	524,124,87,	0,2939,3390,
#Deleted in new
chr20	62304158	62306734	chr20:62304158-62306734	0	+	62304158	62304158	8553170	3	419,124,87,	0,2038,2489,
#Deleted in new
chr20	62305431	62306325	chr20:62305431-62306325	3	-	62305431	62305431	8553170	2	395,286,	0,608,
#Deleted in new
chr20	62307954	62309257	chr20:62307954-62309257	0	-	62307954	62307954	8553170	2	492,402,	0,901,
#Deleted in new
chr20	62309058	62314879	chr20:62309058-62314879	0	-	62309058	62309058	8553170	17	417,120,94,134,165,193,146,136,171,131,144,133,149,163,134,154,576,	0,657,929,1119,1606,1843,2103,2342,2555,2861,3114,3341,3573,4029,4268,4590,5245,
#Boundary problem: need 80, got 0, diff 80, mapped 0.0
chr20	62309064	62367312	chr20:62309064-62367312	3	-	62309335	62367245	0	80	411,120,94,134,154,165,193,146,136,171,131,144,133,149,123,163,134,154,137,171,149,180,111,103,142,155,117,197,171,112,111,152,150,181,101,215,81,125,114,231,84,102,174,141,145,205,212,116,140,127,202,98,109,161,154,107,143,139,157,100,106,53,106,53,138,135,135,138,141,60,135,91,119,116,98,171,119,118,153,364,	0,651,923,1113,1354,1600,1837,2097,2336,2549,2855,3108,3335,3567,3823,4023,4262,4584,5239,5490,5734,5963,6883,7606,7817,8280,8597,9389,9778,10619,11494,11674,12954,13204,13593,14391,14711,15015,15376,16251,17612,17800,18168,18464,18801,19176,19779,20073,20712,21423,21678,21967,23307,23492,24025,24310,24499,24836,25121,25457,25956,26152,27275,27669,28525,28739,28951,29167,29403,36753,37016,37441,37617,37848,42639,42844,43177,44069,53335,57884,
#Deleted in new
chr20	62309144	62310412	chr20:62309144-62310412	0	-	62309144	62309144	8553170	4	331,120,94,235,	0,571,843,1033,
#Deleted in new
chr20	62311256	62312146	chr20:62311256-62312146	0	-	62311256	62311256	8553170	4	51,136,171,227,	0,144,357,663,
#Deleted in new
chr20	62311929	62312961	chr20:62311929-62312961	0	-	62311929	62311929	8553170	4	121,144,133,330,	0,243,470,702,
#Deleted in new
chr20	62313179	62313580	chr20:62313179-62313580	0	-	62313179	62313179	8553170	2	71,254,	0,147,
#Deleted in new
chr20	62315095	62316322	chr20:62315095-62316322	0	-	62315095	62315095	8553170	2	112,375,	0,852,
#Deleted in new
chr20	62318534	62319112	chr20:62318534-62319112	0	-	62318534	62318534	8553170	2	116,270,	0,308,
#Deleted in new
chr20	62323775	62324871	chr20:62323775-62324871	0	-	62323775	62323775	8553170	3	81,125,431,	0,304,665,
#Partially deleted in new
chr20	62325139	62326631	chr20:62325139-62326631	0	-	62325139	62325139	8553170	2	407,172,	0,1320,
#Deleted in new
chr20	62332486	62332557	chr20:62332486-62332557	3	-	62332486	62332486	5263520	1	71,	0,
#Deleted in new
chr20	62334301	62337626	chr20:62334301-62337626	0	-	62336906	62337626	789624	8	41,100,106,53,106,53,83,37,	0,220,719,915,2038,2432,2602,3288,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr20	62345413	62367270	chr20:62345413-62367270	0	-	62345413	62345413	8553170	12	172,60,135,91,119,116,98,171,119,118,153,322,	0,404,667,1092,1268,1499,6290,6495,6828,7720,16986,21535,
#Partially deleted in new
chr20	62346557	62351989	chr20:62346557-62351989	0	-	62346557	62351989	789624	6	39,119,116,270,98,81,	0,124,355,4430,5146,5351,
#Deleted in new
chr20	62352994	62356469	chr20:62352994-62356469	0	+	62352994	62352994	789624	2	214,278,	0,3197,
#Deleted in new
chr20	62353009	62356215	chr20:62353009-62356215	0	+	62353009	62353009	8553170	3	326,213,24,	0,2258,3182,
#Deleted in new
chr20	62353011	62356471	chr20:62353011-62356471	3	+	62353011	62353011	789624	3	197,213,280,	0,2256,3180,
#Deleted in new
chr20	62353012	62356480	chr20:62353012-62356480	0	+	62353012	62353012	8553170	2	323,289,	0,3179,
#Deleted in new
chr20	62386302	62386970	chr20:62386302-62386970	3	-	62386302	62386302	8553170	1	668,	0,
#Deleted in new
chr20	62387115	62388519	chr20:62387115-62388519	3	+	62387338	62388466	0	6	21,68,64,72,56,63,	0,205,495,727,1193,1341,
#Deleted in new
chr20	62387122	62388519	chr20:62387122-62388519	0	+	62387122	62387122	8553170	5	14,68,64,72,211,	0,198,488,720,1186,
#Deleted in new
chr20	62387296	62388520	chr20:62387296-62388520	1	+	62387338	62387761	789624	2	92,910,	0,314,
#Deleted in new
chr20	62387317	62388519	chr20:62387317-62388519	1	+	62387338	62388368	789624	4	71,64,72,211,	0,293,525,991,
#Deleted in new
chr20	62387324	62388115	chr20:62387324-62388115	0	+	62387338	62388001	789624	3	64,64,273,	0,286,518,
#Partially deleted in new
chr20	62388631	62407285	chr20:62388631-62407285	3	-	62390970	62407276	789624	10	2480,205,107,104,166,109,78,93,72,371,	0,2617,3757,4288,4808,5525,6305,7683,7889,18283,
#Deleted in new
chr20	62391013	62396331	chr20:62391013-62396331	0	-	62391013	62396331	789624	7	98,205,107,104,166,78,17,	0,235,1375,1906,2426,3923,5301,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	62402235	62405935	chr20:62402235-62405935	3	-	62402235	62402235	8553170	1	3700,	0,
#Partially deleted in new
chr20	62410236	62427533	chr20:62410236-62427533	3	-	62410877	62419647	789624	14	760,130,71,145,736,167,83,158,73,113,96,43,144,74,	0,2387,2593,3164,3584,4884,5341,5551,5927,6523,6987,8186,9350,17223,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	62427826	62431344	chr20:62427826-62431344	3	+	62427826	62427826	8553170	4	147,244,201,85,	0,1248,3037,3433,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	62429120	62447621	chr20:62429120-62447621	0	+	62429120	62429120	8553170	2	198,222,	0,18279,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	62429546	62431509	chr20:62429546-62431509	1	+	62429546	62429546	8553170	2	225,250,	0,1713,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	62430772	62431515	chr20:62430772-62431515	1	+	62430772	62430772	8553170	2	292,256,	0,487,
#Partially deleted in new
chr20	62463496	62475970	chr20:62463496-62475970	3	-	62464835	62475521	789624	7	1495,125,88,126,176,544,41,	0,1843,2337,2929,9906,11502,12433,
#Deleted in new
chr20	62477869	62478594	chr20:62477869-62478594	3	+	62477869	62477869	8553170	1	725,	0,
#Deleted in new
chr20	62513908	62516096	chr20:62513908-62516096	3	-	62513908	62513908	8553170	1	2188,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	62544342	62551526	chr20:62544342-62551526	3	-	62544342	62544342	789624	7	421,148,1153,155,174,150,101,	0,877,1363,3205,3484,3969,7083,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	62544546	62551524	chr20:62544546-62551524	1	-	62544546	62544546	8553170	3	2312,174,99,	0,3280,6879,
#Deleted in new
chr20	62546215	62546675	chr20:62546215-62546675	0	-	62546215	62546215	8553170	1	460,	0,
#Deleted in new
chr20	62546813	62551511	chr20:62546813-62551511	1	-	62546813	62546813	8553170	6	45,155,174,197,104,86,	0,734,1013,2631,3000,4612,
#Deleted in new
chr20	62550452	62570764	chr20:62550452-62570764	3	+	62550452	62550452	8553170	4	586,201,112,321,	0,3012,14536,19991,
#Deleted in new
chr20	62553560	62570764	chr20:62553560-62570764	0	+	62553560	62553560	8553170	2	105,321,	0,16883,
#Deleted in new
chr20	62554305	62554376	chr20:62554305-62554376	3	+	62554305	62554305	5263520	1	71,	0,
#Deleted in new
chr20	62564911	62565013	chr20:62564911-62565013	3	+	62564911	62564911	5263520	1	102,	0,
#Deleted in new
chr20	62572670	62573384	chr20:62572670-62573384	7	+	62572670	62572670	16724991	1	714,	0,
#Deleted in new
chr20	62575589	62577507	chr20:62575589-62577507	3	+	62575589	62575589	8553170	1	1918,	0,
#Partially deleted in new
chr20	62596731	62603115	chr20:62596731-62603115	3	-	62596731	62596731	8553170	2	487,138,	0,6246,
#Deleted in new
chr20	62633680	62635504	chr20:62633680-62635504	3	-	62633680	62633680	8553170	4	288,126,69,16,	0,402,1661,1808,
#Deleted in new
chr20	62633771	62635862	chr20:62633771-62635862	3	+	62633771	62633771	8553170	2	96,365,	0,1726,
#Deleted in new
chr20	62640718	62643304	chr20:62640718-62643304	3	-	62640718	62640718	8553170	2	1642,291,	0,2295,
#Partially deleted in new
chr20	62642444	62672295	chr20:62642444-62672295	3	+	62656454	62671893	789624	12	109,892,91,122,112,155,196,166,173,65,149,546,	0,13914,16232,17967,18619,22489,23935,25300,25567,26032,26485,29305,
#Partially deleted in new
chr20	62642519	62672293	chr20:62642519-62672293	0	+	62656454	62668135	789624	10	34,892,91,122,112,155,196,797,149,544,	0,13839,16157,17892,18544,22414,23860,25225,26410,29230,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	62648960	62650767	chr20:62648960-62650767	3	-	62648960	62648960	8553170	1	1807,	0,
#Deleted in new
chr20	62651271	62652186	chr20:62651271-62652186	3	-	62651271	62651271	8553170	2	237,377,	0,538,
#Partially deleted in new
chr20	62656358	62672293	chr20:62656358-62672293	1	+	62656454	62671893	789624	11	892,91,122,112,155,196,166,173,65,149,544,	0,2318,4053,4705,8575,10021,11386,11653,12118,12571,15391,
#Deleted in new
chr20	62663018	62666724	chr20:62663018-62666724	0	-	62663018	62663018	8553170	2	469,340,	0,3366,
#Deleted in new
chr20	62663018	62666627	chr20:62663018-62666627	0	-	62663018	62663018	8553170	2	406,243,	0,3366,
#Deleted in new
chr20	62663030	62666622	chr20:62663030-62666622	3	-	62663030	62663030	789624	4	457,574,151,238,	0,1893,2829,3354,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	62666414	62670222	chr20:62666414-62670222	0	+	62666414	62666414	8553170	6	161,166,173,65,149,272,	0,1330,1597,2062,2515,3536,
#Partially deleted in new
chr20	62667477	62672607	chr20:62667477-62672607	0	+	62667477	62667477	8553170	6	109,41,27,65,149,152,	0,392,680,999,1452,4978,
#Partially deleted in new
chr20	62667740	62672154	chr20:62667740-62672154	0	+	62667740	62667740	8553170	5	170,30,65,149,405,	0,414,736,1189,4009,
#Partially deleted in new
chr20	62667812	62672293	chr20:62667812-62672293	0	+	62667812	62671893	789624	4	98,65,149,544,	0,664,1117,3937,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	62668418	62670118	chr20:62668418-62670118	0	+	62668418	62668418	8553170	3	123,149,168,	0,511,1532,
#Partially deleted in new
chr20	62668479	62685785	chr20:62668479-62685785	0	+	62668479	62668479	8553170	3	62,149,345,	0,450,16961,
#Partially deleted in new
chr20	62695023	62700480	chr20:62695023-62700480	3	-	62695023	62695023	8553170	2	240,92,	0,5365,
#Partially deleted in new
chr20	62708836	62762771	chr20:62708836-62762771	3	+	62709207	62760267	0	4	1085,202,91,2754,	0,45848,49429,51181,
#Deleted in new
chr20	62732565	62735347	chr20:62732565-62735347	3	-	62732565	62732565	8553170	2	617,122,	0,2660,
#Partially deleted in new
chr20	62756630	62762771	chr20:62756630-62762771	0	+	62756630	62756630	8553170	3	105,91,2754,	0,1635,3387,
#Deleted in new
chr20	62774127	62775412	chr20:62774127-62775412	3	-	62774127	62774127	789624	2	442,98,	0,1187,
#Deleted in new
chr20	62796452	62801738	chr20:62796452-62801738	3	+	62796523	62799643	0	5	219,122,82,75,2283,	0,657,2134,2522,3003,
#Deleted in new
chr20	62800626	62805587	chr20:62800626-62805587	3	-	62800626	62800626	789624	3	453,95,120,	0,1388,4841,
#Partially deleted in new
chr20	62804834	62814000	chr20:62804834-62814000	3	+	62804859	62813649	789624	7	196,69,79,79,67,149,1771,	0,2702,3412,4750,5664,6627,7395,
#Partially deleted in new
chr20	62804852	62813998	chr20:62804852-62813998	1	+	62804859	62813984	789624	13	178,69,79,79,67,149,326,99,8,18,36,36,50,	0,2684,3394,4732,5646,6609,7377,8645,8991,9000,9019,9058,9096,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	62805885	62814000	chr20:62805885-62814000	1	+	62808162	62813649	789624	5	2440,79,67,149,1771,	0,3699,4613,5576,6344,
#Partially deleted in new
chr20	62807272	62810560	chr20:62807272-62810560	0	+	62807542	62810560	789624	4	333,79,79,62,	0,974,2312,3226,
#Partially deleted in new
chr20	62816243	62825030	chr20:62816243-62825030	0	+	62816243	62816243	8553170	12	74,69,36,72,54,36,24,54,54,42,57,63,	0,1323,2274,2978,3685,4937,5263,5513,5867,6347,8201,8724,
#Partially deleted in new
chr20	62817049	62841159	chr20:62817049-62841159	3	+	62817064	62840732	8553170	32	93,69,36,72,54,36,24,54,54,42,57,54,54,54,54,54,54,54,54,45,54,54,54,72,36,45,33,147,55,183,78,618,	0,517,1468,2172,2879,4131,4457,4707,5061,5541,7395,7918,8767,9154,9717,10191,10873,11714,11873,12405,12578,12716,13310,13467,15104,15970,18871,19137,19428,20033,21634,23492,
#Partially deleted in new
chr20	62817061	62841159	chr20:62817061-62841159	1	+	62817064	62840732	0	32	81,69,36,72,54,36,24,54,54,42,57,54,54,54,54,54,54,54,54,45,54,54,54,72,36,45,33,147,55,183,78,618,	0,505,1456,2160,2867,4119,4445,4695,5049,5529,7383,7906,8755,9142,9705,10179,10861,11702,11861,12393,12566,12704,13298,13455,15092,15958,18859,19125,19416,20021,21622,23480,
#Partially deleted in new
chr20	62817442	62826820	chr20:62817442-62826820	0	+	62817442	62817442	8553170	14	193,36,72,54,36,24,54,54,42,57,54,54,54,54,	0,1075,1779,2486,3738,4064,4314,4668,5148,7002,7525,8374,8761,9324,
#Partially deleted in new
chr20	62817789	62825870	chr20:62817789-62825870	0	+	62817833	62825870	789624	12	80,36,72,54,36,24,54,54,42,57,54,54,	0,728,1432,2139,3391,3717,3967,4321,4801,6655,7178,8027,
#Partially deleted in new
chr20	62822608	62828976	chr20:62822608-62828976	0	+	62822608	62822608	8553170	11	24,57,54,203,54,54,54,54,54,54,54,	0,1836,2359,2855,3208,3595,4158,4632,5314,6155,6314,
#Partially deleted in new
chr20	62831139	62841144	chr20:62831139-62841144	0	+	62831139	62831139	8553170	8	1050,45,33,147,55,183,78,603,	0,1880,4781,5047,5338,5943,7544,9402,
#Partially deleted in new
chr20	62831570	62836157	chr20:62831570-62836157	0	+	62831570	62831570	8553170	3	619,45,237,	0,1449,4350,
#Partially deleted in new
chr20	62831657	62836251	chr20:62831657-62836251	0	+	62831657	62831657	8553170	4	84,36,45,331,	0,496,1362,4263,
#Partially deleted in new
chr20	62831727	62836127	chr20:62831727-62836127	0	+	62831727	62831727	8553170	4	260,36,45,207,	0,426,1292,4193,
#Partially deleted in new
chr20	62832844	62836659	chr20:62832844-62836659	0	+	62832844	62832844	8553170	2	220,739,	0,3076,
#Partially deleted in new
chr20	62832849	62837168	chr20:62832849-62837168	0	+	62832849	62832849	8553170	4	215,33,346,86,	0,3071,3337,4233,
#Partially deleted in new
chr20	62832886	62841159	chr20:62832886-62841159	0	+	62832886	62832886	8553170	6	178,33,147,183,78,618,	0,3034,3300,4196,5797,7655,
#Partially deleted in new
chr20	62836418	62841159	chr20:62836418-62841159	0	+	62836418	62836418	8553170	4	114,183,78,618,	0,664,2265,4123,
#Partially deleted in new
chr20	62836921	62840658	chr20:62836921-62840658	0	+	62836921	62836921	8553170	3	344,78,117,	0,1762,3620,
#Partially deleted in new
chr20	62841114	62861763	chr20:62841114-62861763	3	-	62841974	62861670	789624	6	983,142,244,163,184,740,	0,12901,16280,18249,19010,19909,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	62845137	62861763	chr20:62845137-62861763	1	-	62845901	62861526	789624	6	980,142,244,163,184,740,	0,8878,12257,14226,14987,15886,
#Deleted in new
chr20	62845663	62845912	chr20:62845663-62845912	7	+	62845663	62845663	16724991	1	249,	0,
#Partially deleted in new
chr20	62872249	62873076	chr20:62872249-62873076	7	-	62872249	62872249	16724991	2	361,165,	0,662,
#Partially deleted in new
chr20	62877737	62937952	chr20:62877737-62937952	1	-	62879232	62911612	0	16	4677,196,90,154,529,136,105,117,160,466,214,213,322,841,197,157,	0,13222,14249,15071,15928,16675,17072,17311,18495,18793,28149,29409,31961,33036,36472,60058,
#Partially deleted in new
chr20	62877742	62926503	chr20:62877742-62926503	1	-	62879232	62911612	0	16	4672,196,90,154,529,136,105,117,160,466,214,213,322,841,197,65,	0,13217,14244,15066,15923,16670,17067,17306,18490,18788,28144,29404,31956,33031,36467,48696,
#Partially deleted in new
chr20	62887213	62926503	chr20:62887213-62926503	3	-	62890930	62911612	0	15	3942,90,154,529,136,105,117,160,466,214,213,322,841,197,65,	0,4773,5595,6452,7199,7596,7835,9019,9317,18673,19933,22485,23560,26996,39225,
#Partially deleted in new
chr20	62904997	62937952	chr20:62904997-62937952	1	-	62905785	62911612	0	6	1103,213,322,841,197,157,	0,2149,4701,5776,9212,32798,
#Partially deleted in new
chr20	62905002	62926471	chr20:62905002-62926471	1	-	62905785	62911612	0	6	1098,213,322,841,197,33,	0,2144,4696,5771,9207,21436,
#Partially deleted in new
chr20	62905004	62926469	chr20:62905004-62926469	1	-	62905785	62911612	0	6	1096,213,322,841,197,38,	0,2142,4694,5769,9205,21427,
#Partially deleted in new
chr20	62905005	62914406	chr20:62905005-62914406	1	-	62905554	62911612	0	6	596,214,213,322,841,197,	0,881,2141,4693,5768,9204,
#Deleted in new
chr20	62928620	62929297	chr20:62928620-62929297	3	-	62928620	62928620	8553170	1	677,	0,
#Partially deleted in new
chr20	62938118	62948475	chr20:62938118-62948475	3	+	62941502	62944912	789624	5	135,130,197,198,3737,	0,3372,4868,5376,6620,
#Partially deleted in new
chr20	62938152	62938824	chr20:62938152-62938824	0	+	62938152	62938152	8553170	2	101,225,	0,447,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr20	62952646	62969585	chr20:62952646-62969585	3	+	62952830	62967500	789624	13	243,198,140,100,131,97,97,88,35,116,56,30,2249,	0,4118,4794,7857,9977,10626,10937,11581,12485,12963,13878,14056,14690,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	62952706	62968597	chr20:62952706-62968597	1	+	62953231	62967500	789624	14	183,62,198,140,100,131,97,97,88,35,116,56,30,1261,	0,504,4058,4734,7797,9917,10566,10877,11521,12425,12903,13818,13996,14630,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr20	62952710	62968597	chr20:62952710-62968597	0	+	62952710	62952710	8553170	11	179,198,140,100,746,439,88,35,116,56,1895,	0,4054,4730,7793,9913,10873,11517,12421,12899,13814,13992,
#Partially deleted in new
chr20	62953045	62957580	chr20:62953045-62957580	0	+	62953153	62957580	789624	3	227,198,140,	0,3719,4395,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr20	62962281	62968597	chr20:62962281-62968597	0	+	62962281	62962281	8553170	10	124,111,97,97,88,35,116,56,30,1261,	0,342,991,1302,1946,2850,3328,4243,4421,5055,
#Deleted in new
chr20	62963128	62963849	chr20:62963128-62963849	0	+	62963128	62963128	8553170	2	241,266,	0,455,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr20	62965005	62968597	chr20:62965005-62968597	0	+	62965005	62965005	8553170	5	161,116,56,30,1261,	0,604,1519,1697,2331,
#Deleted in new
chr20	63005926	63007035	chr20:63005926-63007035	3	-	63006048	63006774	789624	1	1109,	0,
#Deleted in new
chr20	63005978	63007035	chr20:63005978-63007035	1	-	63006048	63006726	789624	1	1057,	0,
#Partially deleted in new
chr20	63009382	63084133	chr20:63009382-63084133	0	+	63009382	63009382	8553170	2	91,852,	0,73899,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	63009382	63085071	chr20:63009382-63085071	3	+	63009382	63009382	5263520	4	91,955,1161,1201,	0,70609,72799,74488,
#Deleted in new
chr20	63034216	63037028	chr20:63034216-63037028	3	-	63034216	63034216	8553170	3	493,157,981,	0,1348,1831,
#Deleted in new
chr20	63034216	63036396	chr20:63034216-63036396	1	-	63034216	63034216	5263520	4	452,159,157,349,	0,1066,1348,1831,
#Deleted in new
chr20	63034382	63036353	chr20:63034382-63036353	0	-	63034382	63034382	8553170	2	327,306,	0,1665,
#Partially deleted in new
chr20	63038010	63053863	chr20:63038010-63053863	3	+	63038010	63038010	5263520	6	175,70,145,130,362,352,	0,10845,11501,13611,14894,15501,
#Partially deleted in new
chr20	63095492	63102319	chr20:63095492-63102319	0	-	63095492	63095492	789624	2	691,205,	0,6622,
#Partially deleted in new
chr20	63095492	63102319	chr20:63095492-63102319	3	-	63095492	63095492	789624	3	421,147,205,	0,544,6622,
#Deleted in new
chr20	63102141	63102259	chr20:63102141-63102259	3	+	63102141	63102141	8553170	1	118,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	63102204	63104386	chr20:63102204-63104386	3	+	63102204	63102204	789624	2	1050,832,	0,1350,
#Deleted in new
chr20	63127494	63129459	chr20:63127494-63129459	3	-	63127494	63127494	8553170	1	1965,	0,
#Deleted in new
chr20	63166796	63180903	chr20:63166796-63180903	3	-	63166796	63166796	8553170	2	354,188,	0,13919,
#Deleted in new
chr20	63178499	63178586	chr20:63178499-63178586	3	+	63178499	63178499	5263520	1	87,	0,
#Partially deleted in new
chr20	63195428	63216234	chr20:63195428-63216234	3	-	63196707	63215892	0	5	1306,1521,80,25,369,	0,6858,18435,20148,20437,
#Partially deleted in new
chr20	63196366	63216139	chr20:63196366-63216139	1	-	63196707	63215892	789624	4	368,80,25,274,	0,17497,19210,19499,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	63218040	63218502	chr20:63218040-63218502	3	+	63218040	63218040	8553170	1	462,	0,
#Deleted in new
chr20	63235882	63240507	chr20:63235882-63240507	3	+	63236096	63239605	0	7	563,100,82,46,72,253,252,	0,2020,2513,2686,3279,3475,4373,
#Deleted in new
chr20	63235882	63240495	chr20:63235882-63240495	1	+	63236096	63239605	0	7	563,100,82,46,72,199,240,	0,2020,2513,2686,3279,3529,4373,
#Deleted in new
chr20	63238201	63239610	chr20:63238201-63239610	1	+	63238207	63239605	789624	4	276,46,72,199,	0,367,960,1210,
#Deleted in new
chr20	63238778	63238842	chr20:63238778-63238842	3	+	63238778	63238778	5263520	1	64,	0,
#Partially deleted in new
chr20	63240783	63253437	chr20:63240783-63253437	1	-	63241492	63249940	789624	6	723,61,198,81,138,220,	0,3240,6794,8031,9151,12434,
#Partially deleted in new
chr20	63240783	63254540	chr20:63240783-63254540	3	-	63241496	63254450	789624	7	723,85,61,198,81,138,144,	0,1755,3240,6794,8031,9151,13613,
#Partially deleted in new
chr20	63241141	63248533	chr20:63241141-63248533	0	-	63241141	63241141	8553170	5	365,85,61,198,88,	0,1397,2882,6436,7304,
#Partially deleted in new
chr20	63241276	63247151	chr20:63241276-63247151	0	-	63241276	63241276	8553170	4	230,85,61,86,	0,1262,2747,5789,
#Partially deleted in new
chr20	63241389	63272694	chr20:63241389-63272694	1	-	63241496	63249940	789624	7	117,85,61,198,81,138,113,	0,1149,2634,6188,7425,8545,31192,
#Partially deleted in new
chr20	63241727	63248877	chr20:63241727-63248877	0	-	63241729	63248877	789624	6	25,85,61,74,198,63,	0,811,2296,2742,5850,7087,
#Partially deleted in new
chr20	63243849	63253437	chr20:63243849-63253437	0	-	63243849	63243849	8553170	5	235,198,81,138,220,	0,3728,4965,6085,9368,
#Partially deleted in new
chr20	63244071	63249266	chr20:63244071-63249266	0	-	63244071	63244071	8553170	3	13,198,452,	0,3506,4743,
#Deleted in new
chr20	63248138	63249262	chr20:63248138-63249262	0	-	63248138	63248138	8553170	2	87,448,	0,676,
#Deleted in new
chr20	63253977	63261615	chr20:63253977-63261615	3	+	63253977	63253977	5263520	1	7638,	0,
#Partially deleted in new
chr20	63272784	63289793	chr20:63272784-63289793	1	+	63275580	63287873	0	13	136,64,110,172,101,87,97,57,33,57,60,77,2230,	0,2792,3306,3695,4420,5332,6114,8506,10034,12081,12869,13581,14779,
#Partially deleted in new
chr20	63272784	63289789	chr20:63272784-63289789	1	+	63276547	63287873	0	12	136,64,110,172,87,97,57,33,57,60,77,2226,	0,2792,3306,3695,5332,6114,8506,10034,12081,12869,13581,14779,
#Partially deleted in new
chr20	63272784	63289789	chr20:63272784-63289789	1	+	63275629	63287873	0	13	136,64,172,101,87,97,57,33,30,57,60,71,2226,	0,2792,3695,4420,5332,6114,8506,10034,11066,12081,12869,13587,14779,
#Deleted in new
chr20	63272794	63276547	chr20:63272794-63276547	0	+	63275580	63276547	789624	5	126,211,64,110,68,	0,1205,2782,3296,3685,
#Partially deleted in new
chr20	63272796	63287937	chr20:63272796-63287937	1	+	63276531	63287873	789624	13	124,64,172,101,87,97,57,33,30,57,60,71,374,	0,2780,3683,4408,5320,6102,8494,10022,11054,12069,12857,13575,14767,
#Deleted in new
chr20	63272801	63276742	chr20:63272801-63276742	0	+	63272801	63272801	8553170	4	119,64,110,263,	0,2775,3289,3678,
#Partially deleted in new
chr20	63272810	63287688	chr20:63272810-63287688	0	+	63276531	63287688	789624	12	110,64,172,101,87,97,57,33,57,60,77,125,	0,2766,3669,4394,5306,6088,8480,10008,12055,12843,13555,14753,
#Partially deleted in new
chr20	63272812	63287844	chr20:63272812-63287844	0	+	63275580	63287844	789624	5	108,46,60,77,281,	0,2764,12841,13553,14751,
#Partially deleted in new
chr20	63272815	63288192	chr20:63272815-63288192	0	+	63275580	63278167	789624	12	105,64,110,172,87,97,57,33,57,60,77,629,	0,2761,3275,3664,5301,6083,8475,10003,12050,12838,13550,14748,
#Deleted in new
chr20	63272824	63278553	chr20:63272824-63278553	0	+	63272824	63272824	8553170	6	96,64,110,172,101,437,	0,2752,3266,3655,4380,5292,
#Partially deleted in new
chr20	63272828	63283528	chr20:63272828-63283528	0	+	63272828	63272828	8553170	9	92,64,110,172,101,87,97,57,710,	0,2748,3262,3651,4376,5288,6070,8462,9990,
#Partially deleted in new
chr20	63272832	63289788	chr20:63272832-63289788	1	+	63275580	63287625	0	14	88,64,110,172,101,87,97,57,33,57,60,239,77,2225,	0,2744,3258,3647,4372,5284,6066,8458,9986,12033,12821,13147,13533,14731,
#Partially deleted in new
chr20	63272864	63289344	chr20:63272864-63289344	3	+	63275580	63287873	0	14	56,64,110,172,101,87,97,57,33,30,57,60,71,1781,	0,2712,3226,3615,4340,5252,6034,8426,9954,10986,12001,12789,13507,14699,
#Partially deleted in new
chr20	63273203	63285663	chr20:63273203-63285663	0	+	63275580	63285663	789624	11	207,64,110,172,101,87,97,57,33,57,10,	0,2373,2887,3276,4001,4913,5695,8087,9615,11662,12450,
#Deleted in new
chr20	63273317	63277229	chr20:63273317-63277229	0	+	63275580	63277229	789624	5	201,64,110,172,25,	0,2259,2773,3162,3887,
#Deleted in new
chr20	63284114	63289345	chr20:63284114-63289345	0	+	63284114	63284114	789624	4	808,60,77,1782,	0,1539,2251,3449,
#Deleted in new
chr20	63284291	63289788	chr20:63284291-63289788	0	+	63284291	63284291	789624	5	221,57,60,77,2225,	0,574,1362,2074,3272,
#Deleted in new
chr20	63284307	63285949	chr20:63284307-63285949	0	+	63284307	63284307	8553170	3	205,57,296,	0,558,1346,
#Deleted in new
chr20	63284434	63286327	chr20:63284434-63286327	0	+	63284434	63284434	8553170	2	488,674,	0,1219,
#Deleted in new
chr20	63285485	63288245	chr20:63285485-63288245	0	+	63285485	63285485	8553170	3	485,77,682,	0,880,2078,
#Deleted in new
chr20	63285789	63289788	chr20:63285789-63289788	0	+	63285789	63285789	8553170	3	653,1933,111,	0,1774,3888,
#Deleted in new
chr20	63286807	63286866	chr20:63286807-63286866	3	+	63286807	63286807	5263520	1	59,	0,
#Deleted in new
chr20	63287655	63289130	chr20:63287655-63289130	0	+	63287655	63288531	789624	2	92,821,	0,654,
#Partially deleted in new
chr20	63293185	63330933	chr20:63293185-63330933	3	+	63295107	63329658	0	36	90,92,111,144,159,159,120,165,165,158,130,146,124,140,130,143,133,149,130,36,139,143,110,159,78,87,54,54,54,54,72,36,49,168,77,214,	0,1912,4724,12231,12695,14304,14785,15356,16147,16572,17195,18208,18439,18730,19234,19606,19931,20557,20886,22218,23367,25872,26301,26853,27105,27827,28872,32255,32482,32910,33566,34766,34893,35145,36399,37534,
#Partially deleted in new
chr20	63293223	63330933	chr20:63293223-63330933	0	+	63293223	63293223	8553170	36	52,92,111,144,159,159,120,165,165,161,130,146,124,140,126,143,133,149,130,39,139,539,159,78,87,54,96,54,54,54,72,36,67,168,77,214,	0,1874,4686,12193,12657,14266,14747,15318,16109,16531,17157,18170,18401,18692,19200,19568,19893,20519,20848,22177,23329,25834,26815,27067,27789,28834,32045,32217,32444,32872,33528,34728,34855,35107,36361,37496,
#Boundary problem: need 35, got 0, diff 35, mapped 0.0
chr20	63295039	63334851	chr20:63295039-63334851	1	+	63295107	63329658	0	35	150,111,144,180,159,120,165,165,158,130,146,124,140,130,143,133,149,130,36,139,143,110,159,78,87,54,54,54,54,72,36,67,168,77,4132,	0,2870,10377,10841,12450,12931,13502,14293,14718,15341,16354,16585,16876,17380,17752,18077,18703,19032,20364,21513,24018,24447,24999,25251,25973,27018,30401,30628,31056,31712,32912,33039,33291,34545,35680,
#Deleted in new
chr20	63319085	63328498	chr20:63319085-63328498	0	+	63319085	63328498	789624	14	115,110,159,78,87,54,96,54,54,54,72,36,67,168,	0,401,953,1205,1927,2972,6183,6355,6582,7010,7666,8866,8993,9245,
#Deleted in new
chr20	63320098	63328479	chr20:63320098-63328479	0	+	63320098	63328479	789624	10	99,78,87,54,54,54,72,36,67,149,	0,192,914,5342,5569,5997,6653,7853,7980,8232,
#Deleted in new
chr20	63324312	63330933	chr20:63324312-63330933	0	+	63324312	63324312	8553170	9	1182,54,54,72,36,67,168,77,214,	0,1355,1783,2439,3639,3766,4018,5272,6407,
#Deleted in new
chr20	63327201	63330933	chr20:63327201-63330933	0	+	63327201	63327201	8553170	4	786,420,77,214,	0,877,2383,3518,
#Deleted in new
chr20	63329152	63330933	chr20:63329152-63330933	0	+	63329152	63329152	8553170	2	509,214,	0,1567,
#Deleted in new
chr20	63337338	63337449	chr20:63337338-63337449	3	+	63337338	63337338	8553170	1	111,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	63343222	63361343	chr20:63343222-63361343	3	-	63346737	63361165	0	6	3641,1375,110,45,152,254,	0,6430,12752,13148,16325,17867,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	63343309	63361396	chr20:63343309-63361396	1	-	63346737	63356044	0	7	3554,1375,100,110,45,152,307,	0,6343,12186,12665,13061,16238,17780,
#Deleted in new
chr20	63344068	63377993	chr20:63344068-63377993	0	-	63344068	63344068	8553170	5	2795,1375,652,140,239,	0,5584,29812,31184,33686,
#Deleted in new
chr20	63346095	63346935	chr20:63346095-63346935	0	-	63346095	63346095	8553170	1	840,	0,
#Deleted in new
chr20	63346593	63361304	chr20:63346593-63361304	0	-	63346593	63346593	8553170	6	270,1375,128,45,152,128,	0,3059,9363,9777,12954,14583,
#Deleted in new
chr20	63346593	63359699	chr20:63346593-63359699	0	-	63351021	63359699	789624	6	270,1375,100,110,45,152,	0,3059,8902,9381,9777,12954,
#Deleted in new
chr20	63346593	63361304	chr20:63346593-63361304	0	-	63356046	63361165	789624	6	270,1375,135,45,152,215,	0,3059,9381,9777,12954,14496,
#Deleted in new
chr20	63349528	63351131	chr20:63349528-63351131	0	-	63349528	63349528	8553170	1	1603,	0,
#Deleted in new
chr20	63350907	63361190	chr20:63350907-63361190	0	-	63350907	63350907	8553170	5	120,128,45,152,101,	0,5049,5463,8640,10182,
#Deleted in new
chr20	63350976	63354566	chr20:63350976-63354566	0	-	63350976	63350976	8553170	2	51,34,	0,3556,
#Deleted in new
chr20	63354655	63356070	chr20:63354655-63356070	0	-	63354655	63354655	8553170	2	99,96,	0,1319,
#Deleted in new
chr20	63355376	63356041	chr20:63355376-63356041	0	-	63355376	63355376	8553170	2	33,67,	0,598,
#Deleted in new
chr20	63355642	63356138	chr20:63355642-63356138	0	-	63355642	63355642	8553170	1	496,	0,
#Deleted in new
chr20	63356448	63359583	chr20:63356448-63359583	0	-	63356448	63356448	8553170	2	90,36,	0,3099,
#Deleted in new
chr20	63356537	63359580	chr20:63356537-63359580	0	-	63356537	63356537	8553170	2	67,33,	0,3010,
#Deleted in new
chr20	63359398	63359839	chr20:63359398-63359839	0	-	63359398	63359398	8553170	1	441,	0,
#Deleted in new
chr20	63359656	63360136	chr20:63359656-63360136	0	-	63359656	63359656	8553170	2	43,77,	0,403,
#Deleted in new
chr20	63359987	63371177	chr20:63359987-63371177	3	+	63359987	63359987	789624	5	182,124,63,2578,317,	0,1830,4227,6495,10873,
#Deleted in new
chr20	63360982	63361165	chr20:63360982-63361165	0	-	63360982	63360982	8553170	1	183,	0,
#Deleted in new
chr20	63368881	63371172	chr20:63368881-63371172	0	+	63368881	63368881	8553170	3	179,146,188,	0,1545,2103,
#Deleted in new
chr20	63370752	63378137	chr20:63370752-63378137	0	-	63370752	63370752	8553170	4	1326,1811,140,383,	0,1969,4500,7002,
#Deleted in new
chr20	63374420	63378401	chr20:63374420-63378401	0	-	63374420	63374420	8553170	4	112,140,116,178,	0,832,3334,3803,
#Partially deleted in new
chr20	63400209	63472677	chr20:63400209-63472677	1	-	63406643	63472463	0	16	7166,124,132,106,224,30,69,30,95,96,111,126,176,127,91,510,	0,8203,13240,13878,14693,23967,28157,31130,33599,38415,39388,42196,44449,45028,46537,71958,
#Partially deleted in new
chr20	63400215	63472598	chr20:63400215-63472598	1	-	63400783	63472463	789624	17	628,330,124,108,132,106,224,30,69,95,96,111,126,176,127,91,431,	0,6830,8197,11559,13234,13872,14687,23961,28151,33593,38409,39382,42190,44443,45022,46531,71952,
#Partially deleted in new
chr20	63400215	63472555	chr20:63400215-63472555	1	-	63400783	63472463	789624	17	628,330,124,108,132,106,188,30,69,95,96,111,126,176,127,91,388,	0,6830,8197,11559,13234,13872,14687,23961,28151,33593,38409,39382,42190,44443,45022,46531,71952,
#Partially deleted in new
chr20	63400215	63472555	chr20:63400215-63472555	1	-	63400783	63472463	789624	16	628,330,124,132,106,224,30,69,95,96,111,126,176,127,91,388,	0,6830,8197,13234,13872,14687,23961,28151,33593,38409,39382,42190,44443,45022,46531,71952,
#Partially deleted in new
chr20	63400215	63472555	chr20:63400215-63472555	1	-	63400584	63472463	789624	14	628,132,106,224,30,69,95,96,111,126,176,127,91,388,	0,13234,13872,14687,23961,28151,33593,38409,39382,42190,44443,45022,46531,71952,
#Partially deleted in new
chr20	63406078	63463862	chr20:63406078-63463862	1	-	63406643	63444829	789624	15	1297,124,132,106,224,30,69,95,96,111,126,176,127,91,179,	0,2334,7371,8009,8824,18098,22288,27730,32546,33519,36327,38580,39159,40668,57605,
#Partially deleted in new
chr20	63406136	63472590	chr20:63406136-63472590	3	-	63406643	63472463	0	17	1239,124,132,106,224,54,30,69,30,95,96,111,126,176,127,91,423,	0,2276,7313,7951,8766,13482,18040,22230,25203,27672,32488,33461,36269,38522,39101,40610,66031,
#Partially deleted in new
chr20	63406236	63446791	chr20:63406236-63446791	0	-	63406643	63446791	789624	15	1139,124,132,106,188,30,69,30,95,96,111,126,176,127,45,	0,2176,7213,7851,8666,17940,22130,25103,27572,32388,33361,36169,38422,39001,40510,
#Partially deleted in new
chr20	63406445	63472505	chr20:63406445-63472505	1	-	63406643	63472463	0	15	930,124,132,106,224,30,69,95,96,111,126,176,127,91,338,	0,1967,7004,7642,8457,17731,21921,27363,32179,33152,35960,38213,38792,40301,65722,
#Partially deleted in new
chr20	63406465	63472509	chr20:63406465-63472509	1	-	63406643	63472463	0	16	910,124,132,103,188,30,69,30,95,96,111,126,176,127,91,342,	0,1947,6984,7622,8437,17711,21901,24874,27343,32159,33132,35940,38193,38772,40281,65702,
#Deleted in new
chr20	63407319	63408012	chr20:63407319-63408012	0	-	63407319	63407319	8553170	2	56,44,	0,649,
#Deleted in new
chr20	63408001	63408484	chr20:63408001-63408484	0	-	63408001	63408001	8553170	2	28,72,	0,411,
#Deleted in new
chr20	63408212	63408455	chr20:63408212-63408455	0	-	63408212	63408212	8553170	2	57,43,	0,200,
#Deleted in new
chr20	63408474	63411814	chr20:63408474-63411814	0	-	63408474	63411814	789624	3	62,49,40,	0,1486,3300,
#Deleted in new
chr20	63412191	63413439	chr20:63412191-63413439	0	-	63412191	63412191	8553170	2	68,32,	0,1216,
#Deleted in new
chr20	63413275	63415035	chr20:63413275-63415035	0	-	63413280	63415035	789624	3	306,106,133,	0,812,1627,
#Partially deleted in new
chr20	63414087	63439668	chr20:63414087-63439668	0	-	63414087	63439668	789624	7	103,224,30,69,95,96,71,	0,815,10089,14279,19721,24537,25510,
#Deleted in new
chr20	63415064	63424160	chr20:63415064-63424160	0	-	63415064	63415064	8553170	2	26,74,	0,9022,
#Deleted in new
chr20	63419643	63422689	chr20:63419643-63422689	0	-	63419643	63419643	8553170	2	29,71,	0,2975,
#Deleted in new
chr20	63422268	63424555	chr20:63422268-63424555	3	+	63422268	63422268	8553170	3	71,290,158,	0,1246,2129,
#Partially deleted in new
chr20	63422687	63428422	chr20:63422687-63428422	0	-	63422687	63422687	8553170	3	22,30,56,	0,1489,5679,
#Partially deleted in new
chr20	63423933	63472589	chr20:63423933-63472589	0	-	63423933	63423933	8553170	11	273,69,30,95,96,111,126,176,127,91,422,	0,4433,7406,9875,14691,15664,18472,20725,21304,22813,48234,
#Deleted in new
chr20	63428366	63433476	chr20:63428366-63433476	0	-	63428366	63428366	8553170	2	69,31,	0,5079,
#Deleted in new
chr20	63433508	63433876	chr20:63433508-63433876	0	-	63433508	63433508	8553170	2	32,68,	0,300,
#Deleted in new
chr20	63433612	63433841	chr20:63433612-63433841	0	-	63433612	63433612	8553170	2	67,33,	0,196,
#Partially deleted in new
chr20	63433677	63472640	chr20:63433677-63472640	1	-	63433744	63472463	0	8	226,96,111,126,176,127,91,473,	0,4947,5920,8728,10981,11560,13069,38490,
#Deleted in new
chr20	63433677	63434730	chr20:63433677-63434730	0	-	63433677	63433677	8553170	3	226,223,151,	0,535,902,
#Partially deleted in new
chr20	63433680	63453713	chr20:63433680-63453713	0	-	63433680	63433680	8553170	8	223,96,111,126,176,127,91,34,	0,4944,5917,8725,10978,11557,13066,19999,
#Partially deleted in new
chr20	63433683	63444769	chr20:63433683-63444769	0	-	63438658	63444769	789624	5	220,66,193,126,111,	0,4941,5914,8722,10975,
#Partially deleted in new
chr20	63437352	63438673	chr20:63437352-63438673	0	-	63437352	63437352	8553170	2	51,49,	0,1272,
#Partially deleted in new
chr20	63438208	63444713	chr20:63438208-63444713	0	-	63438435	63444713	789624	4	512,111,126,55,	0,1389,4197,6450,
#Partially deleted in new
chr20	63438688	63445576	chr20:63438688-63445576	0	-	63438688	63438688	8553170	5	32,111,126,176,339,	0,909,3717,5970,6549,
#Deleted in new
chr20	63442437	63443700	chr20:63442437-63443700	0	-	63442437	63442437	8553170	2	94,70,	0,1193,
#Partially deleted in new
chr20	63442523	63460048	chr20:63442523-63460048	0	-	63442523	63442523	8553170	5	8,176,127,91,138,	0,2135,2714,4223,17387,
#Deleted in new
chr20	63443677	63444742	chr20:63443677-63444742	0	-	63443677	63443677	8553170	2	75,84,	0,981,
#Deleted in new
chr20	63445283	63446216	chr20:63445283-63446216	0	-	63445283	63445283	8553170	2	81,95,	0,838,
#Deleted in new
chr20	63445286	63446226	chr20:63445286-63446226	0	-	63445286	63445286	8553170	2	78,22,	0,918,
#Partially deleted in new
chr20	63446758	63471763	chr20:63446758-63471763	0	-	63446758	63446758	8553170	2	79,69,	0,24936,
#Partially deleted in new
chr20	63446766	63466654	chr20:63446766-63466654	0	-	63446766	63446766	8553170	2	71,29,	0,19859,
#Partially deleted in new
chr20	63446771	63470958	chr20:63446771-63470958	0	-	63446771	63446771	8553170	2	66,94,	0,24093,
#Partially deleted in new
chr20	63446774	63459077	chr20:63446774-63459077	0	-	63446774	63446774	8553170	2	63,82,	0,12221,
#Partially deleted in new
chr20	63446775	63471235	chr20:63446775-63471235	0	-	63446775	63446775	8553170	2	62,57,	0,24403,
#Partially deleted in new
chr20	63446809	63466504	chr20:63446809-63466504	0	-	63446809	63446809	8553170	2	28,72,	0,19623,
#Deleted in new
chr20	63446810	63447451	chr20:63446810-63447451	0	-	63446810	63446810	8553170	2	27,76,	0,565,
#Partially deleted in new
chr20	63446812	63461014	chr20:63446812-63461014	0	-	63446812	63446812	8553170	2	25,88,	0,14114,
#Deleted in new
chr20	63448050	63449329	chr20:63448050-63449329	3	+	63448050	63448050	8553170	2	520,269,	0,1010,
#Partially deleted in new
chr20	63459041	63460934	chr20:63459041-63460934	0	-	63459041	63459041	8553170	2	92,8,	0,1885,
#Partially deleted in new
chr20	63461010	63472232	chr20:63461010-63472232	0	-	63461010	63461010	8553170	2	35,65,	0,11157,
#Partially deleted in new
chr20	63488011	63499322	chr20:63488011-63499322	3	-	63488297	63497763	0	8	414,235,257,151,297,180,215,265,	0,906,2467,5125,6793,7844,9608,11046,
#Partially deleted in new
chr20	63488013	63499083	chr20:63488013-63499083	0	-	63488013	63497763	789624	9	139,86,235,257,151,297,180,215,26,	0,326,904,2465,5123,6791,7842,9606,11044,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	63490080	63498748	chr20:63490080-63498748	0	-	63490080	63490080	8553170	4	655,151,297,2893,	0,3056,4724,5775,
#Deleted in new
chr20	63494904	63499083	chr20:63494904-63499083	0	-	63494904	63497763	789624	4	197,180,309,26,	0,951,2715,4153,
#Deleted in new
chr20	63494967	63499177	chr20:63494967-63499177	0	-	63494967	63497763	789624	4	134,180,184,120,	0,888,2652,4090,
#Deleted in new
chr20	63495861	63499184	chr20:63495861-63499184	0	-	63495861	63497763	789624	3	174,164,127,	0,1758,3196,
#Deleted in new
chr20	63497453	63499185	chr20:63497453-63499185	0	-	63497453	63497453	8553170	2	381,128,	0,1604,
#Partially deleted in new
chr20	63502286	63505111	chr20:63502286-63505111	3	+	63502286	63502286	8553170	2	168,208,	0,2617,
#Deleted in new
chr20	63520723	63522206	chr20:63520723-63522206	3	+	63521308	63521879	789624	4	171,80,78,539,	0,560,788,944,
#Deleted in new
chr20	63520764	63521526	chr20:63520764-63521526	0	+	63520764	63520764	8553170	2	130,243,	0,519,
#Deleted in new
chr20	63520774	63521938	chr20:63520774-63521938	1	+	63521308	63521879	789624	3	120,80,427,	0,509,737,
#Deleted in new
chr20	63520776	63521949	chr20:63520776-63521949	0	+	63520776	63520776	8553170	3	118,78,282,	0,735,891,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr20	63528000	63537354	chr20:63528000-63537354	3	-	63529535	63537314	0	8	1723,154,182,162,154,164,122,270,	0,2077,2745,4525,5550,6151,6937,9084,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr20	63528424	63537370	chr20:63528424-63537370	1	-	63533693	63537314	0	7	1299,154,182,162,154,164,286,	0,1653,2321,4101,5126,5727,8660,
#Deleted in new
chr20	63540809	63547504	chr20:63540809-63547504	3	-	63540817	63547463	789624	8	190,157,182,159,142,167,122,397,	0,381,629,1353,1630,2504,3417,6298,
#Deleted in new
chr20	63543410	63543738	chr20:63543410-63543738	3	+	63543410	63543410	8553170	1	328,	0,
#Partially deleted in new
chr20	63547890	63555908	chr20:63547890-63555908	0	+	63555663	63555908	789624	2	549,255,	0,7763,
#Deleted in new
chr20	63553019	63556683	chr20:63553019-63556683	3	+	63555663	63556620	789624	2	82,1030,	0,2634,
#Deleted in new
chr20	63553714	63556668	chr20:63553714-63556668	1	+	63555663	63556620	789624	1	2954,	0,
#Deleted in new
chr20	63554142	63556708	chr20:63554142-63556708	1	+	63555663	63556620	789624	2	64,1055,	0,1511,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr20	63558085	63568074	chr20:63558085-63568074	1	-	63559245	63567650	789624	14	1285,168,157,219,135,193,117,145,162,132,95,3712,76,1231,	0,1842,2085,2393,2709,2996,3264,3515,3737,3986,4202,4434,8292,8758,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	63558661	63561605	chr20:63558661-63561605	0	-	63558661	63558661	8553170	6	274,109,135,193,117,5,	0,1927,2133,2420,2688,2939,
#Partially deleted in new
chr20	63559201	63572455	chr20:63559201-63572455	3	-	63559245	63572385	789624	19	169,168,157,219,135,193,117,145,162,132,95,3712,76,784,642,518,108,184,348,	0,726,969,1277,1593,1880,2148,2399,2621,2870,3086,3318,7176,7642,9156,9946,11302,11483,12906,
#Deleted in new
chr20	63567440	63568605	chr20:63567440-63568605	0	-	63567440	63567440	8553170	2	187,248,	0,917,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	63570125	63574239	chr20:63570125-63574239	0	-	63570125	63570125	8553170	3	486,2537,56,	0,559,4058,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr20	63570138	63574239	chr20:63570138-63574239	0	-	63570138	63570138	8553170	4	473,184,1114,56,	0,546,1969,4045,
#Partially deleted in new
chr20	63587601	63619876	chr20:63587601-63619876	1	-	63590088	63619397	789624	9	3128,123,138,72,158,104,128,98,610,	0,4420,4931,5409,8008,10155,15363,17141,31665,
#Partially deleted in new
chr20	63587601	63604902	chr20:63587601-63604902	1	-	63590088	63604818	789624	8	3128,123,138,72,158,104,128,160,	0,4420,4931,5409,8008,10155,15363,17141,
#Partially deleted in new
chr20	63587601	63627041	chr20:63587601-63627041	3	-	63590088	63619397	789624	10	3128,123,138,72,158,104,128,98,188,86,	0,4420,4931,5409,8008,10155,15363,17141,31665,39354,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	63627226	63628824	chr20:63627226-63628824	3	+	63627226	63627226	789624	2	166,635,	0,963,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	63627249	63628707	chr20:63627249-63628707	0	+	63627249	63627249	789624	2	143,439,	0,1019,
#Partially deleted in new
chr20	63639704	63652766	chr20:63639704-63652766	1	-	63641337	63644295	789624	5	1693,192,176,96,194,	0,2403,4051,4509,12868,
#Partially deleted in new
chr20	63639707	63653427	chr20:63639707-63653427	3	-	63641337	63653345	789624	5	1690,192,176,96,101,	0,2400,4048,4506,13619,
#Partially deleted in new
chr20	63641085	63652766	chr20:63641085-63652766	0	-	63641337	63652766	789624	5	312,192,176,96,194,	0,1022,2670,3128,11487,
#Partially deleted in new
chr20	63643755	63652394	chr20:63643755-63652394	0	-	63643755	63644295	789624	3	176,96,247,	0,458,8392,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	63643755	63657682	chr20:63643755-63657682	0	-	63643755	63644295	789624	3	176,96,333,	0,458,13594,
#Partially deleted in new
chr20	63657809	63696253	chr20:63657809-63696253	3	+	63659402	63695785	789624	35	657,272,199,94,82,61,76,85,66,154,39,79,98,56,75,82,133,114,41,86,78,78,147,116,124,148,143,96,199,141,117,234,156,153,476,	0,1423,3488,4040,4736,5019,8194,9659,14746,16130,20335,20458,22039,22854,27713,27981,29828,30127,30329,30491,30718,31245,31692,31940,32277,32484,32995,33932,34995,35333,36562,36931,37256,37518,37968,
#Partially deleted in new
chr20	63658290	63695980	chr20:63658290-63695980	1	+	63659402	63695785	789624	35	176,272,199,94,154,61,76,85,66,154,39,79,98,56,75,82,133,114,41,86,78,78,147,116,124,148,143,96,199,141,117,234,156,153,203,	0,942,3007,3559,4183,4538,7713,9178,14265,15649,19854,19977,21558,22373,27232,27500,29347,29646,29848,30010,30237,30764,31211,31459,31796,32003,32514,33451,34514,34852,36081,36450,36775,37037,37487,
#Partially deleted in new
chr20	63658293	63696242	chr20:63658293-63696242	1	+	63659402	63695858	789624	35	173,272,199,94,82,61,76,85,66,154,39,79,98,56,75,82,133,114,41,86,78,78,147,116,124,148,143,96,199,141,117,234,156,323,465,	0,939,3004,3556,4252,4535,7710,9175,14262,15646,19851,19974,21555,22370,27229,27497,29344,29643,29845,30007,30234,30761,31208,31456,31793,32000,32511,33448,34511,34849,36078,36447,36772,37034,37484,
#Partially deleted in new
chr20	63658293	63661332	chr20:63658293-63661332	0	+	63659402	63660720	789624	4	173,272,121,35,	0,939,2382,3004,
#Partially deleted in new
chr20	63658313	63696243	chr20:63658313-63696243	1	+	63667523	63695785	789624	34	146,199,94,82,61,76,85,66,154,39,79,98,56,75,82,133,114,41,86,78,78,147,116,124,148,143,96,199,141,117,234,156,153,466,	0,2984,3536,4232,4515,7690,9155,14242,15626,19831,19954,21535,22350,27209,27477,29324,29623,29825,29987,30214,30741,31188,31436,31773,31980,32491,33428,34491,34829,36058,36427,36752,37014,37464,
#Partially deleted in new
chr20	63658314	63694787	chr20:63658314-63694787	0	+	63659402	63694398	789624	32	152,272,199,94,82,61,76,85,66,154,39,79,98,56,75,82,133,114,41,86,78,78,147,116,124,148,143,96,199,141,113,47,	0,918,2983,3535,4231,4514,7689,9154,14241,15625,19830,19953,21534,22349,27208,27476,29323,29622,29824,29986,30213,30740,31187,31435,31772,31979,32490,33427,34490,34828,36061,36426,
#Partially deleted in new
chr20	63658359	63674093	chr20:63658359-63674093	0	+	63659402	63674093	789624	10	100,272,199,94,232,61,76,85,66,154,	0,873,2938,3490,4036,4469,7644,9109,14196,15580,
#Partially deleted in new
chr20	63658619	63661462	chr20:63658619-63661462	0	+	63659402	63661462	789624	3	133,272,165,	0,613,2678,
#Partially deleted in new
chr20	63658629	63661857	chr20:63658629-63661857	0	+	63658629	63658629	8553170	4	84,272,199,114,	0,603,2668,3114,
#Partially deleted in new
chr20	63659299	63698684	chr20:63659299-63698684	3	+	63659402	63690426	789624	35	205,199,94,82,61,76,85,66,154,202,98,56,75,82,133,114,41,86,78,78,147,116,148,143,96,199,141,117,234,156,153,77,432,195,405,	0,1998,2550,3246,3529,6704,8169,13256,14640,18845,20549,21364,26223,26491,28338,28637,28839,29001,29228,29755,30202,30450,30994,31505,32442,33505,33843,35072,35441,35766,36028,36478,37460,38028,38980,
#Deleted in new
chr20	63662453	63662985	chr20:63662453-63662985	0	+	63662453	63662453	8553170	2	174,157,	0,375,
#Partially deleted in new
chr20	63665065	63674052	chr20:63665065-63674052	0	+	63665065	63665065	8553170	5	235,76,85,66,113,	0,938,2403,7490,8874,
#Partially deleted in new
chr20	63682536	63686050	chr20:63682536-63686050	0	+	63682536	63682536	8553170	3	122,75,260,	0,2986,3254,
#Deleted in new
chr20	63686370	63698684	chr20:63686370-63698684	0	+	63686370	63686370	8553170	20	1680,41,86,78,78,147,116,124,148,143,96,199,141,117,234,156,153,1414,195,405,	0,1768,1930,2157,2684,3131,3379,3716,3923,4434,5371,6434,6772,8001,8370,8695,8957,9407,10957,11909,
#Deleted in new
chr20	63688169	63698680	chr20:63688169-63698680	0	+	63688169	63688169	8553170	16	10,86,605,147,461,148,143,1262,141,117,234,156,323,1414,195,401,	0,131,358,1332,1580,2124,2635,3572,4973,6202,6571,6896,7158,7608,9158,10110,
#Deleted in new
chr20	63688338	63690876	chr20:63688338-63690876	0	+	63688338	63690876	789624	7	48,78,78,116,124,148,72,	0,189,716,1411,1748,1955,2466,
#Deleted in new
chr20	63689845	63696245	chr20:63689845-63696245	0	+	63689845	63694398	789624	12	20,124,148,143,96,199,141,170,234,156,323,468,	0,241,448,959,1896,2959,3297,4473,4895,5220,5482,5932,
#Deleted in new
chr20	63689965	63696248	chr20:63689965-63696248	0	+	63689965	63689965	8553170	11	245,148,143,96,199,141,117,234,156,323,471,	0,328,839,1776,2839,3177,4406,4775,5100,5362,5812,
#Deleted in new
chr20	63696650	63698684	chr20:63696650-63698684	3	+	63696767	63698563	0	3	541,195,405,	0,677,1629,
#Partially deleted in new
chr20	63698641	63707658	chr20:63698641-63707658	1	-	63700442	63706690	789624	7	1889,101,71,82,83,88,660,	0,1960,3188,3494,7715,8009,8357,
#Partially deleted in new
chr20	63698642	63708013	chr20:63698642-63708013	1	-	63700682	63707091	789624	6	2060,82,83,88,94,147,	0,3493,7714,8008,8356,9224,
#Partially deleted in new
chr20	63698642	63707853	chr20:63698642-63707853	1	-	63700442	63707091	789624	8	1888,101,71,82,83,88,99,44,	0,1959,3187,3493,7714,8008,8356,9167,
#Partially deleted in new
chr20	63698642	63708013	chr20:63698642-63708013	3	-	63700442	63707091	789624	8	1888,101,71,82,83,88,99,147,	0,1959,3187,3493,7714,8008,8356,9224,
#Deleted in new
chr20	63699455	63700777	chr20:63699455-63700777	0	-	63699455	63699455	8553170	2	1075,176,	0,1146,
#Deleted in new
chr20	63699455	63701388	chr20:63699455-63701388	0	-	63699455	63699455	8553170	3	1075,101,199,	0,1146,1734,
#Partially deleted in new
chr20	63699455	63707838	chr20:63699455-63707838	1	-	63700442	63707091	789624	8	1075,101,71,82,83,88,94,29,	0,1146,2374,2680,6901,7195,7543,8354,
#Partially deleted in new
chr20	63699477	63707916	chr20:63699477-63707916	1	-	63700597	63707091	789624	7	1225,71,82,83,88,99,50,	0,2352,2658,6879,7173,7521,8389,
#Partially deleted in new
chr20	63699496	63707996	chr20:63699496-63707996	0	-	63700682	63707091	789624	7	1034,101,82,83,88,94,130,	0,1105,2639,6860,7154,7502,8370,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	63699511	63706053	chr20:63699511-63706053	0	-	63699511	63699511	8553170	3	1191,69,3918,	0,2318,2624,
#Deleted in new
chr20	63699610	63700301	chr20:63699610-63700301	0	-	63699610	63699610	8553170	2	90,135,	0,556,
#Partially deleted in new
chr20	63700053	63708025	chr20:63700053-63708025	1	-	63700442	63706690	789624	7	477,101,71,82,83,88,159,	0,548,1776,2082,6303,6597,7813,
#Partially deleted in new
chr20	63701696	63706874	chr20:63701696-63706874	0	-	63701696	63701696	8553170	4	204,82,83,224,	0,439,4660,4954,
#Partially deleted in new
chr20	63705578	63706738	chr20:63705578-63706738	0	-	63705578	63705578	8553170	3	213,83,88,	0,778,1072,
#Partially deleted in new
chr20	63707464	63736141	chr20:63707464-63736141	1	+	63708580	63735919	0	7	95,612,134,153,120,406,361,	0,1088,25754,26122,27240,27694,28316,
#Partially deleted in new
chr20	63708034	63736142	chr20:63708034-63736142	1	+	63708580	63735919	0	7	84,612,134,153,120,406,362,	0,518,25184,25552,26670,27124,27746,
#Partially deleted in new
chr20	63708038	63736141	chr20:63708038-63736141	0	+	63708038	63708038	8553170	6	80,612,134,1238,406,361,	0,514,25180,25548,27120,27742,
#Partially deleted in new
chr20	63708052	63736142	chr20:63708052-63736142	1	+	63708580	63735919	0	7	136,612,134,126,120,406,362,	0,500,25166,25534,26652,27106,27728,
#Deleted in new
chr20	63708061	63708871	chr20:63708061-63708871	0	+	63708580	63708871	789624	2	108,319,	0,491,
#Partially deleted in new
chr20	63708085	63736142	chr20:63708085-63736142	1	+	63708580	63735919	0	7	103,612,134,153,120,406,362,	0,467,25133,25501,26619,27073,27695,
#Partially deleted in new
chr20	63708089	63736141	chr20:63708089-63736141	3	+	63708580	63735919	0	7	99,612,134,153,180,406,361,	0,463,25129,25497,26555,27069,27691,
#Partially deleted in new
chr20	63708863	63739103	chr20:63708863-63739103	1	+	63708863	63735919	789624	11	301,134,153,120,406,932,115,82,53,317,506,	0,24355,24723,25841,26295,26917,28669,28957,29144,29319,29734,
#Partially deleted in new
chr20	63708880	63734824	chr20:63708880-63734824	0	+	63708880	63708880	8553170	4	284,134,189,180,	0,24338,24706,25764,
#Partially deleted in new
chr20	63708997	63735185	chr20:63708997-63735185	0	+	63708997	63708997	8553170	4	167,134,153,481,	0,24221,24589,25707,
#Partially deleted in new
chr20	63709088	63733970	chr20:63709088-63733970	0	+	63709088	63709088	8553170	3	76,134,384,	0,24130,24498,
#Deleted in new
chr20	63730071	63730377	chr20:63730071-63730377	3	-	63730071	63730071	8553170	1	306,	0,
#Deleted in new
chr20	63733218	63738481	chr20:63733218-63738481	0	+	63733218	63738480	789624	6	134,189,115,82,53,299,	0,368,4314,4602,4789,4964,
#Deleted in new
chr20	63734153	63735236	chr20:63734153-63735236	0	+	63734153	63734153	8553170	2	671,78,	0,1005,
#Deleted in new
chr20	63735462	63738441	chr20:63735462-63738441	2	+	63735462	63738441	789624	4	102,58,88,259,	0,2382,2510,2720,
#Deleted in new
chr20	63736282	63738234	chr20:63736282-63738234	0	+	63737549	63738234	789624	5	114,115,82,88,52,	0,1250,1538,1690,1900,
#Deleted in new
chr20	63736317	63739103	chr20:63736317-63739103	0	+	63736317	63736317	8553170	4	1330,82,492,506,	0,1503,1690,2280,
#Deleted in new
chr20	63736459	63738132	chr20:63736459-63738132	0	+	63736459	63736459	8553170	3	253,115,312,	0,1073,1361,
#Deleted in new
chr20	63736642	63739103	chr20:63736642-63739103	3	+	63737549	63738900	789624	6	70,115,82,88,317,506,	0,890,1178,1330,1540,1955,
#Deleted in new
chr20	63736656	63738674	chr20:63736656-63738674	1	+	63737549	63738480	789624	5	56,115,240,317,77,	0,876,1164,1526,1941,
#Deleted in new
chr20	63736668	63738805	chr20:63736668-63738805	1	+	63737549	63738480	789624	6	44,115,82,53,317,208,	0,864,1152,1339,1514,1929,
#Deleted in new
chr20	63737283	63738344	chr20:63737283-63738344	0	+	63737549	63738344	789624	4	364,82,53,162,	0,537,724,899,
#Deleted in new
chr20	63737498	63738794	chr20:63737498-63738794	0	+	63737549	63738794	789624	5	149,58,88,317,197,	0,346,474,684,1099,
#Deleted in new
chr20	63737498	63738359	chr20:63737498-63738359	0	+	63737498	63737498	8553170	3	149,58,352,	0,346,509,
#Deleted in new
chr20	63738204	63739103	chr20:63738204-63739103	0	+	63738204	63738204	8553170	2	163,228,	0,671,
#Deleted in new
chr20	63738269	63740398	chr20:63738269-63740398	3	+	63738269	63740398	789624	2	230,22,	0,2107,
#Deleted in new
chr20	63738409	63740398	chr20:63738409-63740398	0	+	63738409	63738409	8553170	3	90,334,22,	0,188,1967,
#Deleted in new
chr20	63739860	63743505	chr20:63739860-63743505	3	+	63739912	63742990	789624	8	178,155,110,188,101,280,92,627,	0,516,1509,2008,2269,2475,2838,3018,
#Deleted in new
chr20	63740242	63742166	chr20:63740242-63742166	0	+	63740242	63740242	8553170	4	289,110,188,37,	0,1127,1626,1887,
#Deleted in new
chr20	63740379	63742490	chr20:63740379-63742490	0	+	63740379	63740379	8553170	4	152,110,101,155,	0,990,1750,1956,
#Deleted in new
chr20	63741251	63743505	chr20:63741251-63743505	0	+	63741251	63741251	8553170	5	228,101,280,92,627,	0,878,1084,1447,1627,
#Deleted in new
chr20	63741403	63742534	chr20:63741403-63742534	0	+	63741403	63741403	8553170	3	76,362,199,	0,465,932,
#Deleted in new
chr20	63741914	63743505	chr20:63741914-63743505	0	+	63741914	63741914	8553170	5	142,101,29,92,627,	0,215,421,784,964,
#Deleted in new
chr20	63741921	63742535	chr20:63741921-63742535	0	+	63741921	63741921	8553170	2	135,406,	0,208,
#Deleted in new
chr20	63742527	63743117	chr20:63742527-63743117	0	+	63742527	63742527	8553170	2	263,239,	0,351,
#Partially deleted in new
chr20	63743665	63831214	chr20:63743665-63831214	3	-	63746929	63790757	789624	5	3636,176,285,970,118,	0,9020,32012,46155,87431,
#Partially deleted in new
chr20	63743667	63790923	chr20:63743667-63790923	1	-	63746929	63790757	789624	4	3634,176,285,1103,	0,9018,32010,46153,
#Partially deleted in new
chr20	63744524	63831244	chr20:63744524-63831244	1	-	63746929	63790757	789624	7	157,169,430,176,285,970,148,	0,618,2347,8161,31153,45296,86572,
#Deleted in new
chr20	63744688	63745951	chr20:63744688-63745951	3	+	63744688	63744688	8553170	2	40,424,	0,839,
#Deleted in new
chr20	63745545	63745958	chr20:63745545-63745958	0	+	63745545	63745545	8553170	2	130,136,	0,277,
#Deleted in new
chr20	63775255	63775962	chr20:63775255-63775962	0	-	63775255	63775255	8553170	2	146,285,	0,422,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	63787719	63789859	chr20:63787719-63789859	0	-	63787719	63787719	8553170	2	590,39,	0,2101,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	63808075	63816521	chr20:63808075-63816521	3	+	63808075	63808075	8553170	3	80,284,169,	0,6811,8277,
#Deleted in new
chr20	63843435	63843915	chr20:63843435-63843915	3	-	63843435	63843435	8553170	1	480,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	63861211	63864293	chr20:63861211-63864293	3	-	63861211	63861211	8553170	1	3082,	0,
#Deleted in new
chr20	63861497	63862988	chr20:63861497-63862988	3	+	63861540	63862950	789624	1	1491,	0,
#Partially deleted in new
chr20	63865227	63891545	chr20:63865227-63891545	1	+	63865365	63889945	789624	5	157,146,149,49,1696,	0,4068,8440,23962,24622,
#Partially deleted in new
chr20	63865227	63891545	chr20:63865227-63891545	1	+	63865365	63890042	789624	6	157,146,149,60,102,1696,	0,4068,8440,10588,17491,24622,
#Partially deleted in new
chr20	63865242	63890424	chr20:63865242-63890424	1	+	63865365	63889945	789624	6	142,77,149,102,49,575,	0,4122,8425,17476,23947,24607,
#Partially deleted in new
chr20	63865289	63891545	chr20:63865289-63891545	1	+	63865365	63889945	789624	7	95,146,149,60,102,49,1696,	0,4006,8378,10526,17429,23900,24560,
#Partially deleted in new
chr20	63865289	63891545	chr20:63865289-63891545	1	+	63865365	63889945	789624	6	95,146,149,102,49,1696,	0,4006,8378,17429,23900,24560,
#Partially deleted in new
chr20	63865289	63891545	chr20:63865289-63891545	1	+	63865365	63889945	789624	8	95,146,149,60,102,42,49,1696,	0,4006,8378,10526,17429,22274,23900,24560,
#Partially deleted in new
chr20	63865293	63891545	chr20:63865293-63891545	1	+	63865365	63889945	789624	9	91,146,149,60,102,27,42,49,1696,	0,4002,8374,10522,17425,20722,22270,23896,24556,
#Partially deleted in new
chr20	63865293	63891545	chr20:63865293-63891545	3	+	63865365	63889945	789624	8	91,146,149,102,27,42,49,1696,	0,4002,8374,17425,20722,22270,23896,24556,
#Partially deleted in new
chr20	63865293	63891545	chr20:63865293-63891545	1	+	63865365	63889945	789624	7	91,146,149,102,42,49,1696,	0,4002,8374,17425,22270,23896,24556,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr20	63886881	63891545	chr20:63886881-63891545	0	+	63886881	63886881	8553170	2	2357,1696,	0,2968,
#Partially deleted in new
chr20	63895181	63936031	chr20:63895181-63936031	3	+	63928345	63931568	0	5	142,118,214,172,4567,	0,33153,34130,35669,36283,
#Partially deleted in new
chr20	63895181	63936031	chr20:63895181-63936031	0	+	63928345	63931119	0	6	142,118,214,172,74,4567,	0,33153,34130,35669,35927,36283,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	63908954	63909119	chr20:63908954-63909119	3	+	63908954	63908954	8553170	1	165,	0,
#Deleted in new
chr20	63919448	63919520	chr20:63919448-63919520	3	+	63919448	63919448	5263520	1	72,	0,
#Deleted in new
chr20	63919504	63919576	chr20:63919504-63919576	3	+	63919504	63919504	5263520	1	72,	0,
#Deleted in new
chr20	63919560	63919632	chr20:63919560-63919632	3	+	63919560	63919560	5263520	1	72,	0,
#Deleted in new
chr20	63919755	63919827	chr20:63919755-63919827	3	+	63919755	63919755	5263520	1	72,	0,
#Deleted in new
chr20	63919867	63919939	chr20:63919867-63919939	3	+	63919867	63919867	5263520	1	72,	0,
#Partially deleted in new
chr20	63939828	63956415	chr20:63939828-63956415	1	-	63939975	63956372	789624	15	227,157,108,123,63,94,99,17,62,190,72,171,107,191,156,	0,321,549,765,965,1121,1281,3824,4568,4716,5822,5976,6332,6624,16431,
#Partially deleted in new
chr20	63939839	63956385	chr20:63939839-63956385	1	-	63940684	63956372	789624	13	216,157,108,123,63,259,62,190,72,171,107,191,126,	0,310,538,754,954,1110,4557,4705,5811,5965,6321,6613,16420,
#Partially deleted in new
chr20	63939923	63951126	chr20:63939923-63951126	3	-	63939975	63950826	789624	15	132,157,108,123,63,94,99,17,62,190,72,171,107,191,368,	0,226,454,670,870,1026,1186,3729,4473,4621,5727,5881,6237,6529,10835,
#Deleted in new
chr20	63940096	63946643	chr20:63940096-63946643	0	-	63940096	63940096	8553170	14	210,108,123,63,94,99,23,17,62,190,72,171,107,191,	0,281,497,697,853,1013,2373,3556,4300,4448,5554,5708,6064,6356,
#Deleted in new
chr20	63940377	63941609	chr20:63940377-63941609	0	-	63940377	63941126	789624	5	108,123,63,94,500,	0,216,416,572,732,
#Deleted in new
chr20	63941464	63941544	chr20:63941464-63941544	3	-	63941464	63941464	5263520	1	80,	0,
#Deleted in new
chr20	63942630	63942726	chr20:63942630-63942726	3	-	63942630	63942630	5263520	1	96,	0,
#Deleted in new
chr20	63945696	63946508	chr20:63945696-63946508	0	-	63945696	63945696	8553170	3	26,463,56,	0,108,756,
#Partially deleted in new
chr20	63946452	63956341	chr20:63946452-63956341	0	-	63946452	63946452	8553170	3	191,251,82,	0,1772,9807,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr20	63953383	63956985	chr20:63953383-63956985	3	+	63953383	63953383	789624	1	3602,	0,
#Deleted in new
chr20	63956701	63969865	chr20:63956701-63969865	3	-	63959887	63967950	0	17	3438,99,63,102,195,171,99,93,125,147,72,227,641,129,143,123,52,	0,4607,5240,5571,5885,6393,6640,6916,7087,7369,7618,7788,9439,10174,10679,11128,13112,
#Partially deleted in new
chr20	63974112	63979642	chr20:63974112-63979642	3	-	63975509	63979467	789624	5	1420,141,172,182,266,	0,1579,2858,3112,5264,
#Partially deleted in new
chr20	63975359	63980008	chr20:63975359-63980008	0	-	63975359	63975359	8553170	5	173,141,172,182,155,	0,332,1611,1865,4494,
#Partially deleted in new
chr20	63975474	63979984	chr20:63975474-63979984	0	-	63975474	63975474	8553170	6	58,141,172,182,117,131,	0,217,1496,1750,2770,4379,
#Deleted in new
chr20	63977296	63979642	chr20:63977296-63979642	0	-	63977296	63979467	789624	3	110,117,266,	0,948,2080,
#Partially deleted in new
chr20	63981134	64033100	chr20:63981134-64033100	3	+	63981245	64032993	0	21	182,169,119,79,177,156,95,157,163,119,219,123,122,139,120,177,134,92,115,127,260,	0,1912,3772,12272,13781,14192,17910,18468,19942,29065,30150,35588,41622,43420,44804,45847,46468,47343,48242,50783,51706,
#Deleted in new
chr20	64034343	64039001	chr20:64034343-64039001	0	+	64034343	64034343	5263520	4	1704,2066,153,380,	0,1793,3952,4278,
#Deleted in new
chr20	64035662	64039001	chr20:64035662-64039001	0	+	64035662	64035662	8553170	3	385,2066,503,	0,474,2836,
#Deleted in new
chr20	64036174	64039001	chr20:64036174-64039001	3	+	64036323	64038759	789624	4	152,276,153,380,	0,1752,2121,2447,
#Deleted in new
chr20	64038131	64039962	chr20:64038131-64039962	0	+	64038131	64038759	789624	2	71,1341,	0,490,
#Deleted in new
chr20	64038139	64039778	chr20:64038139-64039778	0	+	64038139	64038139	8553170	2	309,1157,	0,482,
#Deleted in new
chr20	64047581	64049641	chr20:64047581-64049641	3	-	64048165	64049516	789624	2	1381,483,	0,1577,
#Partially deleted in new
chr20	64049835	64062867	chr20:64049835-64062867	0	+	64049835	64049835	8553170	2	217,438,	0,12594,
#Deleted in new
chr20	64056802	64057084	chr20:64056802-64057084	3	+	64056802	64056802	8553170	2	75,113,	0,169,
#Partially deleted in new
chr20	64057292	64072346	chr20:64057292-64072346	1	+	64066484	64072180	0	11	359,74,63,106,88,131,57,155,147,72,175,	0,5137,9183,9622,10754,12068,12472,12967,13196,14577,14879,
#Partially deleted in new
chr20	64063143	64072346	chr20:64063143-64072346	3	+	64063312	64072180	0	10	241,63,106,88,131,57,155,147,72,175,	0,3332,3771,4903,6217,6621,7116,7345,8726,9028,
#Partially deleted in new
chr20	64063157	64072346	chr20:64063157-64072346	1	+	64063312	64070033	789624	8	227,63,106,88,131,871,72,175,	0,3318,3757,4889,6203,6607,8712,9014,
#Deleted in new
chr20	64063157	64070209	chr20:64063157-64070209	0	+	64063157	64063157	8553170	6	227,63,106,88,131,445,	0,3318,3757,4889,6203,6607,
#Deleted in new
chr20	64063195	64064123	chr20:64063195-64064123	0	+	64063195	64063195	8553170	2	189,232,	0,696,
#Deleted in new
chr20	64063236	64070635	chr20:64063236-64070635	0	+	64066484	64070635	789624	9	148,58,63,106,88,131,57,155,147,	0,655,3239,3678,4810,6124,6528,7023,7252,
#Deleted in new
chr20	64063480	64068134	chr20:64063480-64068134	0	+	64066484	64068134	789624	4	469,63,106,88,	0,2995,3434,4566,
#Deleted in new
chr20	64064086	64070635	chr20:64064086-64070635	0	+	64066484	64070635	789624	8	266,133,106,88,131,57,155,147,	0,2319,2828,3960,5274,5678,6173,6402,
#Deleted in new
chr20	64064325	64069372	chr20:64064325-64069372	0	+	64064325	64064325	8553170	5	27,63,106,88,12,	0,2150,2589,3721,5035,
#Partially deleted in new
chr20	64065549	64072345	chr20:64065549-64072345	0	+	64065549	64065549	8553170	8	989,106,88,131,650,147,72,174,	0,1365,2497,3811,4215,4939,6320,6622,
#Partially deleted in new
chr20	64066210	64071941	chr20:64066210-64071941	0	+	64066484	64071941	789624	9	122,63,106,88,131,57,155,147,72,	0,265,704,1836,3150,3554,4049,4278,5659,
#Partially deleted in new
chr20	64069463	64072347	chr20:64069463-64072347	0	+	64069463	64069463	8553170	6	28,57,155,144,84,176,	0,301,796,1028,2394,2708,
#Partially deleted in new
chr20	64069764	64072347	chr20:64069764-64072347	0	+	64069764	64069764	8553170	5	57,155,147,84,176,	0,495,724,2093,2407,
#Partially deleted in new
chr20	64070213	64072347	chr20:64070213-64072347	0	+	64070213	64070213	8553170	3	422,72,176,	0,1656,1958,
#Partially deleted in new
chr20	64070290	64072346	chr20:64070290-64072346	0	+	64070290	64070290	8553170	2	345,477,	0,1579,
#Partially deleted in new
chr20	64070327	64072346	chr20:64070327-64072346	0	+	64070327	64070327	8553170	3	87,147,477,	0,161,1542,
#Partially deleted in new
chr20	64073180	64079988	chr20:64073180-64079988	3	-	64073852	64076886	0	6	864,235,75,122,98,116,	0,963,1286,3344,3676,6692,
#Partially deleted in new
chr20	64073180	64079492	chr20:64073180-64079492	1	-	64073852	64076886	0	6	864,235,75,122,98,199,	0,963,1286,3344,3676,6113,
#Partially deleted in new
chr20	64074466	64079811	chr20:64074466-64079811	0	-	64074466	64074466	8553170	4	75,122,98,518,	0,2058,2390,4827,
#Deleted in new
chr20	64076563	64079425	chr20:64076563-64079425	0	-	64076563	64076563	8553170	2	83,132,	0,2730,
#Deleted in new
chr20	64076954	64077010	chr20:64076954-64077010	3	-	64076954	64076954	5263520	1	56,	0,
#Deleted in new
chr20	64080172	64100643	chr20:64080172-64100643	3	+	64092720	64098799	0	5	180,151,266,356,2368,	0,11793,12515,17629,18103,
#Deleted in new
chr20	64080195	64100643	chr20:64080195-64100643	1	+	64092720	64098799	0	4	157,266,356,2368,	0,12492,17606,18080,
#Deleted in new
chr20	64083379	64084359	chr20:64083379-64084359	3	-	64083384	64084219	789624	2	326,542,	0,438,
#Deleted in new
chr20	64083398	64084359	chr20:64083398-64084359	1	-	64083434	64084219	789624	3	96,123,542,	0,184,419,
#Deleted in new
chr20	64085015	64100643	chr20:64085015-64100643	1	+	64092720	64098799	0	6	133,95,151,266,356,2368,	0,1489,6950,7672,12786,13260,
#Partially deleted in new
chr20	64102393	64190160	chr20:64102393-64190160	0	+	64102533	64190160	789624	2	162,98,	0,87669,
#Deleted in new
chr20	64105819	64107171	chr20:64105819-64107171	3	-	64105829	64106831	789624	1	1352,	0,
#Partially deleted in new
chr20	64151790	64228102	chr20:64151790-64228102	1	+	64198861	64228035	789624	16	120,98,55,31,63,248,135,91,114,215,125,270,155,63,63,215,	0,38272,47071,48101,53244,53762,59415,60257,61743,65276,67120,67922,70102,71320,75624,76097,
#Partially deleted in new
chr20	64164473	64242253	chr20:64164473-64242253	3	+	64198861	64240448	789624	23	266,98,55,31,63,248,894,135,91,114,215,125,270,155,63,69,63,84,222,92,104,144,1934,	0,25589,34388,35418,40561,41079,43120,46732,47574,49060,52593,54437,55239,57419,58637,58817,62941,63414,67690,72081,72813,75286,75846,
#Partially deleted in new
chr20	64164473	64242251	chr20:64164473-64242251	1	+	64198861	64240448	789624	23	266,98,55,31,63,248,894,135,91,114,215,206,270,155,63,69,63,84,222,92,104,144,1932,	0,25589,34388,35418,40561,41079,43120,46732,47574,49060,52593,54356,55239,57419,58637,58817,62941,63414,67690,72081,72813,75286,75846,
#Partially deleted in new
chr20	64164473	64228035	chr20:64164473-64228035	1	+	64198861	64228035	789624	16	266,98,55,31,63,248,135,91,114,215,125,270,155,63,63,148,	0,25589,34388,35418,40561,41079,46732,47574,49060,52593,54437,55239,57419,58637,62941,63414,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	64164611	64191884	chr20:64164611-64191884	0	+	64164611	64164611	8553170	3	128,98,398,	0,25451,26875,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr20	64255694	64287821	chr20:64255694-64287821	1	+	64259965	64287821	789624	6	176,331,103,172,124,143,	0,4247,8734,9563,12192,31984,
#Partially deleted in new
chr20	64255740	64275653	chr20:64255740-64275653	1	+	64259965	64273600	789624	6	130,331,103,172,43,2433,	0,4201,8688,9517,12227,17480,
#Partially deleted in new
chr20	64255748	64274139	chr20:64255748-64274139	1	+	64259965	64273600	789624	4	122,237,43,919,	0,4193,12219,17472,
#Partially deleted in new
chr20	64255755	64260248	chr20:64255755-64260248	0	+	64259965	64260248	789624	2	169,307,	0,4186,
#Partially deleted in new
chr20	64255767	64276230	chr20:64255767-64276230	3	+	64259965	64273600	789624	6	103,331,103,172,124,3010,	0,4174,8661,9490,12119,17453,
#Partially deleted in new
chr20	64255843	64264526	chr20:64255843-64264526	0	+	64259965	64264526	789624	4	27,116,331,98,	0,2923,4098,8585,
#Partially deleted in new
chr20	64256585	64260059	chr20:64256585-64260059	0	+	64256585	64256585	8553170	2	466,118,	0,3356,
#Partially deleted in new
chr20	64259830	64264527	chr20:64259830-64264527	0	+	64259965	64264527	789624	2	442,99,	0,4598,
#Partially deleted in new
chr20	64260084	64262950	chr20:64260084-64262950	0	+	64260084	64262553	789624	3	188,160,180,	0,2443,2686,
#Partially deleted in new
chr20	64265511	64273545	chr20:64265511-64273545	0	+	64265511	64273545	789624	3	102,124,325,	0,2375,7709,
#Partially deleted in new
chr20	64271481	64274842	chr20:64271481-64274842	0	+	64271481	64271481	8553170	2	749,1622,	0,1739,
#Deleted in new
chr20	64278305	64278561	chr20:64278305-64278561	7	+	64278305	64278305	16724991	1	256,	0,
#Deleted in new
chr20	64290186	64292998	chr20:64290186-64292998	7	-	64290186	64290186	16724991	1	2812,	0,
#Partially deleted in new
chr20	64290384	64303559	chr20:64290384-64303559	1	+	64290384	64290384	5263520	3	350,169,409,	0,4506,12766,
#Partially deleted in new
chr20	64294896	64311371	chr20:64294896-64311371	0	+	64294896	64294896	8553170	3	163,208,105,	0,8254,16370,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr20	64294940	64313132	chr20:64294940-64313132	3	+	64294940	64294940	8553170	3	119,105,405,	0,16326,17787,
#Deleted in new
chr20	64327417	64327972	chr20:64327417-64327972	7	-	64327417	64327417	16724991	1	555,	0,
#Deleted in new
chr20_GL383577v2_alt	43506	43937	chr20_GL383577v2_alt:43506-43937	3	-	43506	43506	8553170	1	431,	0,
#Deleted in new
chr20_GL383577v2_alt	101479	102106	chr20_GL383577v2_alt:101479-102106	3	+	101479	101479	8553170	2	146,390,	0,237,
#Deleted in new
chr20_GL383577v2_alt	101526	107244	chr20_GL383577v2_alt:101526-107244	0	+	101526	101526	8553170	2	99,127,	0,5591,
#Deleted in new
chr20_GL383577v2_alt	122277	123075	chr20_GL383577v2_alt:122277-123075	3	-	122277	122277	8553170	2	442,190,	0,608,
#Deleted in new
chr20_KI270869v1_alt	8604	54269	chr20_KI270869v1_alt:8604-54269	3	+	8604	50593	789624	9	138,186,254,143,234,234,140,165,3883,	0,15512,28520,29404,33263,34684,38060,39131,41782,
#Deleted in new
chr20_KI270869v1_alt	8604	50900	chr20_KI270869v1_alt:8604-50900	0	+	8604	50593	789624	9	138,186,254,143,234,234,140,165,514,	0,15512,28520,29404,33263,34684,38060,39131,41782,
#Deleted in new
chr20_KI270869v1_alt	8604	50868	chr20_KI270869v1_alt:8604-50868	0	+	8604	50593	789624	9	138,186,254,143,234,234,140,165,482,	0,15512,28520,29404,33263,34684,38060,39131,41782,
#Deleted in new
chr20_KI270869v1_alt	64039	108774	chr20_KI270869v1_alt:64039-108774	2	-	64333	108774	789624	3	360,120,52,	0,44097,44683,
#Deleted in new
chr20_KI270869v1_alt	85384	118223	chr20_KI270869v1_alt:85384-118223	1	-	86754	118223	789624	10	1538,120,57,126,131,170,115,148,249,90,	0,22752,23338,24185,25326,25754,28362,28933,31712,32749,
#Deleted in new
chr20_KI270869v1_alt	85943	118774	chr20_KI270869v1_alt:85943-118774	0	-	85943	85943	8553170	11	979,120,57,126,131,170,115,148,249,90,255,	0,22193,22779,23626,24767,25195,27803,28374,31153,32190,32576,
#Deleted in new
chr20_KI270869v1_alt	86445	92019	chr20_KI270869v1_alt:86445-92019	0	-	86445	86445	8553170	3	477,365,1305,	0,3078,4269,
#Deleted in new
chr20_KI270869v1_alt	111154	118148	chr20_KI270869v1_alt:111154-118148	0	-	111154	118148	789624	5	154,115,148,213,15,	0,2592,3163,5978,6979,
#Deleted in new
chr20_KI270869v1_alt	115095	117582	chr20_KI270869v1_alt:115095-117582	0	-	115095	115095	8553170	1	2487,	0,
#Deleted in new
chr20_KI270870v1_alt	2747	5056	chr20_KI270870v1_alt:2747-5056	0	+	2747	3745	789624	2	356,1835,	0,474,
#Deleted in new
chr20_KI270870v1_alt	2747	5589	chr20_KI270870v1_alt:2747-5589	0	+	2747	3745	789624	2	356,2368,	0,474,
#Deleted in new
chr20_KI270870v1_alt	2747	5589	chr20_KI270870v1_alt:2747-5589	3	+	2747	3745	789624	2	356,2368,	0,474,
#Deleted in new
chr20_KI270870v1_alt	10765	12117	chr20_KI270870v1_alt:10765-12117	3	-	10775	11777	789624	1	1352,	0,
#Deleted in new
chr20_KI270870v1_alt	48725	52236	chr20_KI270870v1_alt:48725-52236	3	-	48725	48725	8553170	4	119,217,78,147,	0,333,738,3364,
#Deleted in new
chr20_KI270870v1_alt	60382	136693	chr20_KI270870v1_alt:60382-136693	1	+	107452	136626	789624	16	120,98,55,31,63,248,135,91,114,215,125,270,155,63,63,215,	0,38271,47070,48100,53243,53761,59414,60256,61742,65275,67119,67921,70101,71319,75623,76096,
#Deleted in new
chr20_KI270870v1_alt	73064	150844	chr20_KI270870v1_alt:73064-150844	3	+	107452	149039	789624	23	266,98,55,31,63,248,894,135,91,114,215,125,270,155,63,69,63,84,222,92,104,144,1934,	0,25589,34388,35418,40561,41079,43120,46732,47574,49060,52593,54437,55239,57419,58637,58817,62941,63414,67690,72081,72813,75286,75846,
#Deleted in new
chr20_KI270870v1_alt	73064	150842	chr20_KI270870v1_alt:73064-150842	1	+	107452	149039	789624	23	266,98,55,31,63,248,894,135,91,114,215,206,270,155,63,69,63,84,222,92,104,144,1932,	0,25589,34388,35418,40561,41079,43120,46732,47574,49060,52593,54356,55239,57419,58637,58817,62941,63414,67690,72081,72813,75286,75846,
#Deleted in new
chr20_KI270870v1_alt	73064	136626	chr20_KI270870v1_alt:73064-136626	1	+	107452	136626	789624	16	266,98,55,31,63,248,135,91,114,215,125,270,155,63,63,148,	0,25589,34388,35418,40561,41079,46732,47574,49060,52593,54437,55239,57419,58637,62941,63414,
#Deleted in new
chr20_KI270870v1_alt	73202	100475	chr20_KI270870v1_alt:73202-100475	0	+	73202	73202	8553170	3	128,98,398,	0,25451,26875,
#Deleted in new
chr20_KI270870v1_alt	116663	183433	chr20_KI270870v1_alt:116663-183433	3	+	116663	149039	789624	22	415,135,91,114,215,125,270,155,63,69,63,84,222,92,104,144,441,331,103,172,124,1622,	0,3133,3975,5461,8994,10838,11640,13820,15038,15218,19342,19815,24091,28482,29214,31687,32247,51869,56356,57185,59814,65148,
#Deleted in new
chr20_KI270870v1_alt	164331	183433	chr20_KI270870v1_alt:164331-183433	3	+	168556	182191	789624	6	130,331,103,172,43,1622,	0,4201,8688,9517,12227,17480,
#Deleted in new
chr20_KI270870v1_alt	164339	182730	chr20_KI270870v1_alt:164339-182730	1	+	168556	182191	789624	4	122,237,43,919,	0,4193,12219,17472,
#Deleted in new
chr20_KI270870v1_alt	164346	168839	chr20_KI270870v1_alt:164346-168839	0	+	168556	168839	789624	2	169,307,	0,4186,
#Deleted in new
chr20_KI270870v1_alt	164358	182645	chr20_KI270870v1_alt:164358-182645	1	+	168720	182191	789624	6	103,221,80,172,124,834,	0,4174,8684,9490,12119,17453,
#Deleted in new
chr20_KI270870v1_alt	164358	183433	chr20_KI270870v1_alt:164358-183433	1	+	168556	182191	789624	6	103,331,103,172,124,1622,	0,4174,8661,9490,12119,17453,
#Deleted in new
chr20_KI270870v1_alt	164434	173117	chr20_KI270870v1_alt:164434-173117	0	+	168556	173117	789624	4	27,116,331,98,	0,2923,4098,8585,
#Deleted in new
chr20_KI270870v1_alt	164851	166085	chr20_KI270870v1_alt:164851-166085	0	+	164851	164851	8553170	1	1234,	0,
#Deleted in new
chr20_KI270870v1_alt	165176	168650	chr20_KI270870v1_alt:165176-168650	0	+	168556	168650	789624	2	466,118,	0,3356,
#Deleted in new
chr20_KI270870v1_alt	168421	173118	chr20_KI270870v1_alt:168421-173118	0	+	168556	173118	789624	2	442,99,	0,4598,
#Deleted in new
chr20_KI270870v1_alt	168556	182645	chr20_KI270870v1_alt:168556-182645	1	+	168556	182191	789624	5	307,103,172,124,834,	0,4463,5292,7921,13255,
#Deleted in new
chr20_KI270870v1_alt	168675	171541	chr20_KI270870v1_alt:168675-171541	0	+	168675	168675	8553170	3	188,160,180,	0,2443,2686,
#Deleted in new
chr20_KI270870v1_alt	174102	182136	chr20_KI270870v1_alt:174102-182136	0	+	174102	174102	8553170	3	102,124,325,	0,2375,7709,
#Deleted in new
chr20_KI270870v1_alt	180072	183433	chr20_KI270870v1_alt:180072-183433	0	+	180072	180072	8553170	2	749,1622,	0,1739,
#Deleted in new
chr20_KI270871v1_alt	182	33239	chr20_KI270871v1_alt:182-33239	0	-	182	33239	789624	10	224,30,69,95,96,111,126,176,127,91,	0,9274,13464,18906,23725,24698,28845,30598,31177,32966,
#Deleted in new
chr20_KI270871v1_alt	182	33239	chr20_KI270871v1_alt:182-33239	0	-	182	33239	789624	11	188,30,69,30,95,96,111,126,176,127,91,	0,9274,13464,16437,18906,23725,24698,28845,30598,31177,32966,
#Deleted in new
chr20_KI270871v1_alt	182	33239	chr20_KI270871v1_alt:182-33239	0	-	182	33239	789624	10	188,30,69,95,96,111,126,176,127,91,	0,9274,13464,18906,23725,24698,28845,30598,31177,32966,
#Deleted in new
chr20_KI270871v1_alt	182	33239	chr20_KI270871v1_alt:182-33239	3	-	182	33239	789624	12	224,54,30,69,30,95,96,111,126,176,127,91,	0,4716,9274,13464,16437,18906,23725,24698,28845,30598,31177,32966,
#Deleted in new
chr20_KI270871v1_alt	182	33239	chr20_KI270871v1_alt:182-33239	0	-	182	33239	789624	10	224,30,69,95,96,111,126,176,127,91,	0,9274,13464,18906,23725,24698,28845,30598,31177,32966,
#Deleted in new
chr20_KI270871v1_alt	182	24951	chr20_KI270871v1_alt:182-24951	0	-	182	24951	789624	6	224,30,69,95,96,71,	0,9274,13464,18906,23725,24698,
#Deleted in new
chr20_KI270871v1_alt	182	33239	chr20_KI270871v1_alt:182-33239	0	-	182	33239	789624	11	224,30,69,30,95,96,111,126,176,127,91,	0,9274,13464,16437,18906,23725,24698,28845,30598,31177,32966,
#Deleted in new
chr20_KI270871v1_alt	182	33193	chr20_KI270871v1_alt:182-33193	0	-	182	33193	789624	11	188,30,69,30,95,96,111,126,176,127,45,	0,9274,13464,16437,18906,23725,24698,28845,30598,31177,32966,
#Deleted in new
chr20_KI270871v1_alt	182	33239	chr20_KI270871v1_alt:182-33239	0	-	182	33239	789624	10	224,30,69,95,96,111,126,176,127,91,	0,9274,13464,18906,23725,24698,28845,30598,31177,32966,
#Deleted in new
chr20_KI270871v1_alt	182	33239	chr20_KI270871v1_alt:182-33239	0	-	182	33239	789624	10	224,30,69,95,96,111,126,176,127,91,	0,9274,13464,18906,23725,24698,28845,30598,31177,32966,
#Deleted in new
chr20_KI270871v1_alt	182	315	chr20_KI270871v1_alt:182-315	0	-	182	315	789624	1	133,	0,
#Deleted in new
chr20_KI270871v1_alt	7548	9835	chr20_KI270871v1_alt:7548-9835	3	+	7548	7548	8553170	3	71,290,158,	0,1246,2129,
#Deleted in new
chr20_KI270871v1_alt	9213	33239	chr20_KI270871v1_alt:9213-33239	0	-	9213	9213	8553170	10	273,69,30,95,96,111,126,176,127,91,	0,4433,7406,9875,14694,15667,19814,21567,22146,23935,
#Deleted in new
chr20_KI270871v1_alt	18957	20010	chr20_KI270871v1_alt:18957-20010	0	-	18957	18957	8553170	3	226,223,151,	0,535,902,
#Deleted in new
chr20_KI270871v1_alt	18960	33239	chr20_KI270871v1_alt:18960-33239	0	-	19024	33239	789624	7	223,96,111,126,176,127,91,	0,4947,5920,10067,11820,12399,14188,
#Deleted in new
chr20_KI270871v1_alt	18963	30891	chr20_KI270871v1_alt:18963-30891	0	-	23941	30891	789624	5	220,66,193,126,111,	0,4944,5917,10064,11817,
#Deleted in new
chr20_KI270871v1_alt	23491	30835	chr20_KI270871v1_alt:23491-30835	0	-	23491	23491	8553170	4	512,111,126,55,	0,1389,5536,7289,
#Deleted in new
chr20_KI270871v1_alt	23971	31708	chr20_KI270871v1_alt:23971-31708	0	-	23971	23971	8553170	5	32,111,126,176,349,	0,909,5056,6809,7388,
#Deleted in new
chr20_KI270871v1_alt	29145	47614	chr20_KI270871v1_alt:29145-47614	0	-	29145	29145	8553170	5	8,176,127,91,138,	0,1635,2214,4003,18331,
#Deleted in new
chr20_KI270871v1_alt	34452	35731	chr20_KI270871v1_alt:34452-35731	3	+	34452	34452	8553170	2	520,269,	0,1010,
#Deleted in new
chr20_KI270871v1_alt	47038	51430	chr20_KI270871v1_alt:47038-51430	0	-	47038	47038	8553170	3	29,58,181,	0,438,4211,
#Partially deleted in new
chr21	5011798	5017145	chr21:5011798-5017145	3	+	5011798	5017100	789624	4	76,140,86,211,	0,749,2587,5136,
#Partially deleted in new
chr21	5022492	5040661	chr21:5022492-5040661	3	+	5022679	5040616	8553170	7	201,41,351,291,165,36,77,	0,2516,3787,5442,9560,10915,18092,
#Partially deleted in new
chr21	5022492	5040666	chr21:5022492-5040666	1	+	5022679	5040616	789624	6	201,41,291,165,36,82,	0,2516,5442,9560,10915,18092,
#Partially deleted in new
chr21	5022493	5036771	chr21:5022493-5036771	1	+	5022679	5034592	789624	7	200,41,351,291,165,36,2190,	0,2515,3786,5441,9559,10914,12088,
#Partially deleted in new
chr21	5022530	5034684	chr21:5022530-5034684	0	+	5022679	5026610	789624	7	163,41,199,291,165,36,103,	0,2478,3901,5404,9522,10877,12051,
#Partially deleted in new
chr21	5022532	5036125	chr21:5022532-5036125	1	+	5022679	5034592	8553170	6	161,41,291,165,36,1544,	0,2476,5402,9520,10875,12049,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	5073457	5087867	chr21:5073457-5087867	3	+	5073457	5073457	8553170	2	228,251,	0,14159,
#Partially deleted in new
chr21	5079293	5127927	chr21:5079293-5127927	0	-	5079293	5127927	789624	6	3,51,93,120,114,30,	0,390,42417,45462,46585,48604,
#Partially deleted in new
chr21	5079293	5127927	chr21:5079293-5127927	0	-	5079293	5127927	789624	5	3,51,120,114,30,	0,390,45462,46585,48604,
#Partially deleted in new
chr21	5116340	5127143	chr21:5116340-5127143	1	-	5117102	5125928	789624	6	891,157,93,120,114,60,	0,2350,5370,8415,9538,10743,
#Partially deleted in new
chr21	5116340	5128425	chr21:5116340-5128425	3	-	5117102	5128354	789624	7	891,157,93,120,114,53,212,	0,2350,5370,8415,9538,11557,11873,
#Partially deleted in new
chr21	5116342	5133805	chr21:5116342-5133805	3	-	5117102	5133805	789624	7	889,157,93,120,114,75,151,	0,2348,5368,8413,9536,17083,17312,
#Partially deleted in new
chr21	5116936	5128372	chr21:5116936-5128372	1	-	5117102	5128354	789624	6	295,157,120,114,53,159,	0,1754,7819,8942,10961,11277,
#Partially deleted in new
chr21	5120633	5128273	chr21:5120633-5128273	0	-	5120654	5128273	789624	6	256,93,120,114,53,60,	0,1077,4122,5245,7264,7580,
#Partially deleted in new
chr21	5120633	5124868	chr21:5120633-5124868	0	-	5120633	5120633	8553170	3	478,93,113,	0,1077,4122,
#Partially deleted in new
chr21	5120635	5128413	chr21:5120635-5128413	0	-	5125959	5128354	789624	5	254,93,120,114,200,	0,1075,4120,5243,7578,
#Partially deleted in new
chr21	5121448	5128378	chr21:5121448-5128378	0	-	5121448	5121448	8553170	5	355,120,114,53,165,	0,3307,4430,6449,6765,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	5122012	5127927	chr21:5122012-5127927	0	-	5122012	5122012	8553170	4	188,120,114,30,	0,2743,3866,5885,
#Deleted in new
chr21	5124485	5125178	chr21:5124485-5125178	0	-	5124485	5124485	8553170	2	390,154,	0,539,
#Partially deleted in new
chr21	5130870	5154734	chr21:5130870-5154734	3	-	5131280	5154640	789624	21	585,75,151,219,66,109,148,181,151,148,149,137,71,144,230,136,144,100,95,113,112,	0,2555,2784,3031,4218,5064,6456,8827,10082,10406,10688,11661,12351,13220,15266,15787,16418,16908,17339,22090,23752,
#Deleted in new
chr21	5133452	5136043	chr21:5133452-5136043	0	-	5134414	5136043	789624	6	48,151,219,119,66,109,	0,202,449,908,1636,2482,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	5134198	5142896	chr21:5134198-5142896	0	-	5134198	5134198	8553170	6	956,1540,1406,148,149,365,	0,1736,5499,7078,7360,8333,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	5136987	5137939	chr21:5136987-5137939	0	-	5136987	5136987	8553170	2	487,62,	0,890,
#Partially deleted in new
chr21	5143221	5144724	chr21:5143221-5144724	0	-	5143221	5143221	8553170	3	71,144,301,	0,869,1202,
#Partially deleted in new
chr21	5143221	5145445	chr21:5143221-5145445	0	-	5143221	5143221	8553170	3	71,144,208,	0,869,2016,
#Partially deleted in new
chr21	5147348	5154527	chr21:5147348-5154527	0	-	5147348	5147348	8553170	5	84,100,95,113,167,	0,430,861,5612,7012,
#Partially deleted in new
chr21	5147389	5154247	chr21:5147389-5154247	0	-	5147389	5147389	8553170	5	43,100,95,113,188,	0,389,820,5571,6670,
#Partially deleted in new
chr21	5155498	5163695	chr21:5155498-5163695	3	-	5158520	5163695	789624	3	3261,195,178,	0,3581,8019,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	5157011	5165472	chr21:5157011-5165472	0	-	5157011	5157011	8553170	3	1748,195,1955,	0,2068,6506,
#Partially deleted in new
chr21	5232667	5243833	chr21:5232667-5243833	3	-	5232667	5232667	8553170	2	257,131,	0,11035,
#Partially deleted in new
chr21	5499150	5502542	chr21:5499150-5502542	0	-	5499150	5499150	8553170	3	659,103,174,	0,848,3218,
#Partially deleted in new
chr21	5499154	5502497	chr21:5499154-5502497	3	-	5499154	5499154	8553170	3	813,35,129,	0,912,3214,
#Partially deleted in new
chr21	5499556	5502497	chr21:5499556-5502497	0	-	5499556	5499556	8553170	2	545,129,	0,2812,
#Partially deleted in new
chr21	5553636	5590200	chr21:5553636-5590200	0	+	5553636	5553636	8553170	3	202,165,182,	0,32186,36382,
#Partially deleted in new
chr21	5553658	5590178	chr21:5553658-5590178	1	+	5553658	5553658	8553170	4	180,165,55,160,	0,32164,32786,36360,
#Partially deleted in new
chr21	5553668	5590683	chr21:5553668-5590683	0	+	5553668	5553668	8553170	2	170,665,	0,36350,
#Partially deleted in new
chr21	5553668	5591228	chr21:5553668-5591228	3	+	5553668	5553668	8553170	4	170,59,165,1210,	0,12456,32154,36350,
#Partially deleted in new
chr21	5553678	5588646	chr21:5553678-5588646	1	+	5553678	5553678	8553170	5	160,139,166,165,510,	0,25991,31131,32144,34458,
#Partially deleted in new
chr21	5553702	5614880	chr21:5553702-5614880	0	+	5553702	5553702	8553170	4	136,166,165,129,	0,31107,32120,61049,
#Partially deleted in new
chr21	5553706	5586369	chr21:5553706-5586369	0	+	5553706	5553706	8553170	2	132,547,	0,32116,
#Partially deleted in new
chr21	5553709	5588786	chr21:5553709-5588786	0	+	5553709	5553709	8553170	3	129,165,650,	0,32113,34427,
#Partially deleted in new
chr21	5553716	5588184	chr21:5553716-5588184	0	+	5553716	5553716	8553170	4	122,254,165,48,	0,31093,32106,34420,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	5565962	5591234	chr21:5565962-5591234	0	+	5565962	5565962	8553170	3	221,165,1216,	0,19860,24056,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	5582227	5592004	chr21:5582227-5592004	1	+	5582227	5582227	8553170	2	3760,3868,	0,5909,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	5583465	5589528	chr21:5583465-5589528	0	+	5583465	5583465	8553170	2	1792,182,	0,5881,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	5585777	5592003	chr21:5585777-5592003	0	+	5585777	5585777	8553170	2	210,1985,	0,4241,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	5597389	5597490	chr21:5597389-5597490	3	+	5597389	5597389	8553170	1	101,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	5703181	5705637	chr21:5703181-5705637	3	-	5703181	5703181	8553170	1	2456,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	5705344	5707160	chr21:5705344-5707160	3	+	5705344	5705344	8553170	2	109,198,	0,1618,
#Deleted in new
chr21	5707003	5709456	chr21:5707003-5709456	3	-	5707003	5707003	8553170	2	154,303,	0,2150,
#Partially deleted in new
chr21	5972923	5973383	chr21:5972923-5973383	3	-	5972952	5973333	8553170	1	460,	0,
#Deleted in new
chr21	6008603	6008810	chr21:6008603-6008810	7	+	6008603	6008603	16724991	1	207,	0,
#Deleted in new
chr21	6034689	6036093	chr21:6034689-6036093	3	+	6034689	6034689	8553170	1	1404,	0,
#Partially deleted in new
chr21	6060339	6076305	chr21:6060339-6076305	3	+	6060339	6060339	789624	4	160,68,183,302,	0,2184,6527,15664,
#Partially deleted in new
chr21	6066968	6068128	chr21:6066968-6068128	1	+	6066968	6066968	8553170	2	81,424,	0,736,
#Partially deleted in new
chr21	6073291	6076135	chr21:6073291-6076135	0	+	6073291	6073291	8553170	2	101,132,	0,2712,
#Partially deleted in new
chr21	6073347	6076153	chr21:6073347-6076153	1	+	6073347	6073347	8553170	4	45,150,68,150,	0,1428,2392,2656,
#Partially deleted in new
chr21	6073448	6076103	chr21:6073448-6076103	0	+	6073448	6073448	8553170	3	225,150,100,	0,1327,2555,
#Deleted in new
chr21	6081192	6082585	chr21:6081192-6082585	3	+	6081192	6081192	8553170	2	92,384,	0,1009,
#Deleted in new
chr21	6084363	6088242	chr21:6084363-6088242	0	-	6084363	6084363	8553170	3	782,1333,898,	0,1397,2981,
#Partially deleted in new
chr21	6084380	6091407	chr21:6084380-6091407	3	-	6084380	6084380	8553170	4	2713,183,304,41,	0,2964,4815,6986,
#Partially deleted in new
chr21	6111133	6123739	chr21:6111133-6123739	3	+	6112083	6121519	789624	14	119,170,117,64,162,125,124,224,147,126,217,282,232,2596,	0,936,1605,5090,5328,5760,5994,6670,7122,7649,7890,8586,9353,10010,
#Deleted in new
chr21	6111169	6112956	chr21:6111169-6112956	0	+	6111169	6111169	8553170	3	83,170,218,	0,900,1569,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	6223479	6223580	chr21:6223479-6223580	3	-	6223479	6223479	8553170	1	101,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	6228965	6267304	chr21:6228965-6267304	3	-	6228965	6228965	8553170	4	1986,165,59,170,	0,6017,25825,38169,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	6228966	6235192	chr21:6228966-6235192	0	-	6228966	6228966	8553170	2	1985,210,	0,6016,
#Partially deleted in new
chr21	6230398	6267275	chr21:6230398-6267275	0	-	6230398	6230398	8553170	3	553,165,141,	0,4584,36736,
#Partially deleted in new
chr21	6230665	6267313	chr21:6230665-6267313	0	-	6230665	6230665	8553170	2	286,179,	0,36469,
#Partially deleted in new
chr21	6230695	6267278	chr21:6230695-6267278	0	-	6230695	6230695	8553170	3	256,172,144,	0,5293,36439,
#Partially deleted in new
chr21	6232565	6267280	chr21:6232565-6267280	0	-	6232565	6232565	8553170	3	268,165,146,	0,2417,34569,
#Partially deleted in new
chr21	6232596	6267317	chr21:6232596-6267317	0	-	6232596	6232596	8553170	4	237,165,172,183,	0,2386,3392,34538,
#Partially deleted in new
chr21	6272134	6276532	chr21:6272134-6276532	7	-	6272134	6272134	16724991	10	30,99,60,111,99,105,99,147,117,156,	0,647,832,1787,2016,2802,3138,3732,3952,4242,
#Deleted in new
chr21	6309160	6312948	chr21:6309160-6312948	7	+	6309160	6309160	16724991	6	144,117,108,91,169,112,	0,539,1511,2305,2518,3676,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	6318433	6360415	chr21:6318433-6360415	3	+	6318433	6318433	8553170	4	171,60,165,1861,	0,11114,35924,40121,
#Partially deleted in new
chr21	6318439	6356986	chr21:6318439-6356986	0	+	6318439	6318439	8553170	4	165,103,98,299,	0,2432,4160,38248,
#Partially deleted in new
chr21	6318494	6321717	chr21:6318494-6321717	0	+	6318494	6318494	8553170	3	110,103,554,	0,2377,2669,
#Partially deleted in new
chr21	6318494	6359184	chr21:6318494-6359184	0	+	6318494	6318494	8553170	3	110,165,630,	0,35863,40060,
#Partially deleted in new
chr21	6354263	6359767	chr21:6354263-6359767	1	+	6354263	6354263	8553170	4	259,20,162,1027,	0,4291,4313,4477,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	6365954	6366055	chr21:6365954-6366055	3	+	6365954	6365954	8553170	1	101,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr21	6444868	6467532	chr21:6444868-6467532	1	-	6445557	6463871	789624	17	793,85,109,135,78,106,85,126,92,70,135,80,135,107,217,76,85,	0,3612,4954,5643,6035,7250,9120,9762,10709,12012,12196,12425,13052,15318,18794,20075,22579,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr21	6444868	6468040	chr21:6444868-6468040	3	-	6445557	6463871	789624	18	457,122,85,109,135,78,106,85,126,92,70,135,80,135,107,217,76,138,	0,671,3612,4954,5643,6035,7250,9120,9762,10709,12012,12196,12425,13052,15318,18794,20075,23034,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr21	6444868	6467509	chr21:6444868-6467509	1	-	6445557	6463871	789624	17	793,85,109,135,78,106,85,126,92,70,135,80,135,107,217,38,62,	0,3612,4954,5643,6035,7250,9120,9762,10709,12012,12196,12425,13052,15318,18794,20075,22579,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr21	6444868	6460082	chr21:6444868-6460082	0	-	6444868	6444868	8553170	14	793,85,109,135,78,106,85,126,92,70,135,80,135,627,	0,3612,4954,5643,6035,7250,9120,9762,10709,12012,12196,12425,13052,14587,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr21	6444872	6468040	chr21:6444872-6468040	1	-	6445557	6463871	789624	17	789,85,109,135,78,106,85,126,92,70,135,80,135,107,217,76,138,	0,3608,4950,5639,6031,7246,9116,9758,10705,12008,12192,12421,13048,15314,18790,20071,23030,
#Partially deleted in new
chr21	6445432	6467532	chr21:6445432-6467532	1	-	6445557	6463871	8553170	18	229,42,85,109,135,78,106,85,126,92,70,135,80,135,107,217,76,85,	0,2303,3048,4390,5079,5471,6686,8556,9198,10145,11448,11632,11861,12488,14754,18230,19511,22015,
#Partially deleted in new
chr21	6447131	6467534	chr21:6447131-6467534	0	-	6447131	6447131	8553170	2	641,87,	0,20316,
#Deleted in new
chr21	6447260	6450632	chr21:6447260-6450632	0	-	6447260	6447260	8553170	5	319,42,85,109,121,	0,475,1220,2562,3251,
#Partially deleted in new
chr21	6456879	6461713	chr21:6456879-6461713	0	-	6456879	6456879	8553170	6	71,135,80,135,107,56,	0,185,414,1041,3307,4778,
#Partially deleted in new
chr21	6457900	6467483	chr21:6457900-6467483	0	-	6457900	6457900	8553170	6	155,183,107,217,76,36,	0,1555,2286,5762,7043,9547,
#Partially deleted in new
chr21	6484622	6499200	chr21:6484622-6499200	3	-	6484768	6499172	789624	8	294,93,134,99,50,67,88,72,	0,1515,1699,2484,2740,7508,11370,14506,
#Partially deleted in new
chr21	6484622	6496930	chr21:6484622-6496930	1	-	6484768	6487392	8553170	7	294,93,134,99,50,67,938,	0,1515,1699,2484,2740,7508,11370,
#Partially deleted in new
chr21	6484622	6487612	chr21:6484622-6487612	0	-	6484622	6484622	8553170	3	294,93,1291,	0,1515,1699,
#Partially deleted in new
chr21	6484623	6499256	chr21:6484623-6499256	1	-	6484768	6487392	789624	9	293,93,134,99,50,67,67,88,128,	0,1514,1698,2483,2739,7507,8420,11369,14505,
#Partially deleted in new
chr21	6484625	6499202	chr21:6484625-6499202	0	-	6492168	6499172	8553170	9	291,93,134,99,50,67,67,88,74,	0,1512,1696,2481,2737,7505,8418,11367,14503,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	6484629	6488059	chr21:6484629-6488059	0	-	6484629	6484629	8553170	2	1601,1738,	0,1692,
#Partially deleted in new
chr21	6484660	6499261	chr21:6484660-6499261	0	-	6484660	6484660	8553170	7	256,93,134,99,50,3950,133,	0,1477,1661,2446,2702,7470,14468,
#Partially deleted in new
chr21	6484708	6499202	chr21:6484708-6499202	1	-	6484768	6499172	789624	8	208,93,134,99,50,67,88,74,	0,1429,1613,2398,2654,8335,11284,14420,
#Partially deleted in new
chr21	6484854	6499204	chr21:6484854-6499204	0	-	6492286	6499172	789624	8	62,93,134,99,50,38,88,76,	0,1283,1467,2252,2508,7400,11138,14274,
#Partially deleted in new
chr21	6487370	6496154	chr21:6487370-6496154	0	-	6487370	6487370	8553170	4	42,67,67,162,	0,4760,5673,8622,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	6489290	6499202	chr21:6489290-6499202	0	-	6489290	6489290	8553170	3	3820,88,74,	0,6702,9838,
#Deleted in new
chr21	6492129	6493585	chr21:6492129-6493585	0	-	6492129	6492129	8553170	2	68,542,	0,914,
#Partially deleted in new
chr21	6507016	6507389	chr21:6507016-6507389	7	-	6507016	6507016	16724991	1	373,	0,
#Deleted in new
chr21	6520343	6520670	chr21:6520343-6520670	3	-	6520343	6520343	8553170	1	327,	0,
#Partially deleted in new
chr21	6550748	6553955	chr21:6550748-6553955	3	-	6550748	6550748	8553170	3	702,164,186,	0,2018,3021,
#Deleted in new
chr21	6560713	6564489	chr21:6560713-6564489	3	+	6560782	6563964	789624	3	258,123,735,	0,1487,3041,
#Deleted in new
chr21	6561283	6563978	chr21:6561283-6563978	1	+	6561486	6563964	789624	3	254,123,224,	0,917,2471,
#Deleted in new
chr21	6561910	6564084	chr21:6561910-6564084	0	+	6561910	6561910	8553170	2	413,330,	0,1844,
#Deleted in new
chr21	6561953	6564203	chr21:6561953-6564203	1	+	6562015	6563964	789624	3	140,123,449,	0,247,1801,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	6630181	6638337	chr21:6630181-6638337	1	-	6630181	6630181	8553170	2	2256,3734,	0,4422,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	6630181	6659740	chr21:6630181-6659740	0	-	6630181	6630181	8553170	3	389,165,222,	0,4422,29337,
#Partially deleted in new
chr21	6630181	6670692	chr21:6630181-6670692	3	-	6630181	6630181	8553170	4	389,165,60,171,	0,4422,29337,40340,
#Partially deleted in new
chr21	6631797	6670650	chr21:6631797-6670650	0	-	6631797	6631797	8553170	3	640,165,129,	0,2806,38724,
#Partially deleted in new
chr21	6632152	6670642	chr21:6632152-6670642	1	-	6632152	6632152	8553170	4	285,98,92,121,	0,34276,35999,38369,
#Partially deleted in new
chr21	6632362	6635776	chr21:6632362-6635776	0	-	6632362	6632362	8553170	3	75,165,166,	0,2241,3248,
#Partially deleted in new
chr21	6634357	6670611	chr21:6634357-6670611	0	-	6634357	6634357	8553170	3	411,60,90,	0,25161,36164,
#Partially deleted in new
chr21	6667303	6670667	chr21:6667303-6670667	3	-	6667303	6667303	8553170	3	659,92,146,	0,848,3218,
#Partially deleted in new
chr21	6667303	6670695	chr21:6667303-6670695	1	-	6667303	6667303	8553170	3	659,103,174,	0,848,3218,
#Partially deleted in new
chr21	6667709	6670650	chr21:6667709-6670650	0	-	6667709	6667709	8553170	2	545,129,	0,2812,
#Deleted in new
chr21	6676177	6679962	chr21:6676177-6679962	7	-	6676177	6676177	16724991	9	122,78,135,91,103,130,130,91,151,	0,199,1133,1393,2170,2482,3103,3367,3634,
#Deleted in new
chr21	6712595	6716361	chr21:6712595-6716361	7	+	6712595	6712595	16724991	8	142,106,112,94,94,91,61,118,	0,330,543,1161,1494,2283,3501,3648,
#Partially deleted in new
chr21	6721811	6725209	chr21:6721811-6725209	3	+	6721811	6721811	8553170	3	180,35,817,	0,2447,2581,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	6789591	6812297	chr21:6789591-6812297	3	+	6789591	6789591	8553170	3	115,56,1441,	0,8138,21265,
#Partially deleted in new
chr21	6858538	6897263	chr21:6858538-6897263	3	+	6858538	6858538	8553170	3	105,179,269,	0,499,38456,
#Deleted in new
chr21	6859170	6859256	chr21:6859170-6859256	3	+	6859170	6859170	5263520	1	86,	0,
#Deleted in new
chr21	6897290	6899280	chr21:6897290-6899280	7	+	6897290	6897290	16724991	1	1990,	0,
#Deleted in new
chr21	6904883	6906692	chr21:6904883-6906692	3	+	6904883	6904883	8553170	2	282,176,	0,1633,
#Partially deleted in new
chr21	6986449	6997699	chr21:6986449-6997699	3	-	6986449	6986449	8553170	5	199,213,98,92,108,	0,5660,7049,8772,11142,
#Partially deleted in new
chr21	6993156	6997740	chr21:6993156-6997740	0	-	6993156	6993156	8553170	3	440,92,149,	0,2065,4435,
#Partially deleted in new
chr21	6994373	6997737	chr21:6994373-6997737	3	-	6994373	6994373	8553170	3	659,92,146,	0,848,3218,
#Partially deleted in new
chr21	6994373	6997765	chr21:6994373-6997765	1	-	6994373	6994373	8553170	3	659,103,174,	0,848,3218,
#Deleted in new
chr21	7003247	7007022	chr21:7003247-7007022	7	-	7003247	7003247	16724991	9	118,67,55,91,112,133,115,91,142,	0,195,1215,1392,2163,2478,3132,3363,3633,
#Partially deleted in new
chr21	7020598	7025166	chr21:7020598-7025166	3	+	7020598	7020598	8553170	2	51,542,	0,4026,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	7048890	7087097	chr21:7048890-7087097	3	+	7048890	7048890	8553170	4	170,59,165,1853,	0,12456,32158,36354,
#Partially deleted in new
chr21	7048916	7085500	chr21:7048916-7085500	0	+	7048916	7048916	8553170	3	144,172,256,	0,31119,36328,
#Partially deleted in new
chr21	7048919	7085797	chr21:7048919-7085797	0	+	7048919	7048919	8553170	3	141,165,553,	0,32129,36325,
#Partially deleted in new
chr21	7048938	7083598	chr21:7048938-7083598	0	+	7048938	7048938	8553170	4	122,254,165,236,	0,31097,32110,34424,
#Partially deleted in new
chr21	7048981	7083742	chr21:7048981-7083742	0	+	7048981	7048981	8553170	3	79,165,380,	0,32067,34381,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	7081003	7087229	chr21:7081003-7087229	0	+	7081003	7081003	8553170	2	210,1985,	0,4241,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	7092615	7092716	chr21:7092615-7092716	3	+	7092615	7092615	8553170	1	101,	0,
#Deleted in new
chr21	7129102	7130287	chr21:7129102-7130287	7	+	7129102	7129102	16724991	1	1185,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	7135333	7137789	chr21:7135333-7137789	3	-	7135333	7135333	8553170	1	2456,	0,
#Deleted in new
chr21	7385057	7388799	chr21:7385057-7388799	7	-	7385057	7385057	16724991	9	85,61,55,91,103,133,130,91,130,	0,171,1182,1362,2139,2448,3072,3333,3612,
#Partially deleted in new
chr21	7421441	7425839	chr21:7421441-7425839	7	-	7421441	7421441	16724991	10	156,117,147,99,105,105,111,60,99,30,	0,329,519,1161,1491,2277,2500,3506,3652,4368,
#Partially deleted in new
chr21	7430658	7467182	chr21:7430658-7467182	0	+	7430658	7430658	8553170	4	180,165,55,160,	0,32168,32790,36364,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	7430668	7468875	chr21:7430668-7468875	3	+	7430668	7430668	8553170	4	170,59,165,1853,	0,12456,32158,36354,
#Partially deleted in new
chr21	7430694	7467278	chr21:7430694-7467278	0	+	7430694	7430694	8553170	3	144,172,256,	0,31119,36328,
#Partially deleted in new
chr21	7430716	7465376	chr21:7430716-7465376	1	+	7430716	7430716	8553170	4	122,254,165,236,	0,31097,32110,34424,
#Partially deleted in new
chr21	7430729	7467742	chr21:7430729-7467742	0	+	7430729	7430729	8553170	3	109,165,720,	0,32097,36293,
#Partially deleted in new
chr21	7430759	7465784	chr21:7430759-7465784	0	+	7430759	7430759	8553170	3	79,165,644,	0,32067,34381,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	7462781	7469007	chr21:7462781-7469007	0	+	7462781	7462781	8553170	2	210,1985,	0,4241,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	7474393	7474494	chr21:7474393-7474494	3	+	7474393	7474393	8553170	1	101,	0,
#Deleted in new
chr21	7626343	7627528	chr21:7626343-7627528	7	-	7626343	7626343	16724991	1	1185,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	7663910	7664011	chr21:7663910-7664011	3	-	7663910	7663910	8553170	1	101,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	7669396	7679177	chr21:7669396-7679177	3	-	7669396	7669396	8553170	2	3868,3764,	0,6017,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	7669529	7676444	chr21:7669529-7676444	0	-	7669529	7669529	8553170	3	130,165,107,	0,5884,6808,
#Partially deleted in new
chr21	7670166	7675666	chr21:7670166-7675666	0	-	7670166	7670166	8553170	2	1216,253,	0,5247,
#Partially deleted in new
chr21	7671126	7676592	chr21:7671126-7676592	0	-	7671126	7671126	8553170	2	256,173,	0,5293,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	7671872	7677935	chr21:7671872-7677935	0	-	7671872	7671872	8553170	2	182,1792,	0,4271,
#Partially deleted in new
chr21	7672754	7681742	chr21:7672754-7681742	1	-	7672754	7672754	8553170	4	510,165,166,146,	0,2659,3671,8842,
#Partially deleted in new
chr21	7673073	7676627	chr21:7673073-7676627	0	-	7673073	7673073	8553170	3	191,165,202,	0,2340,3352,
#Partially deleted in new
chr21	7673216	7676592	chr21:7673216-7676592	0	-	7673216	7673216	8553170	3	48,165,255,	0,2197,3121,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	7744961	7749394	chr21:7744961-7749394	0	+	7744961	7744961	8553170	2	77,496,	0,3937,
#Partially deleted in new
chr21	7744970	7772246	chr21:7744970-7772246	1	+	7748975	7755116	8553170	5	68,89,167,189,680,	0,3928,9981,24216,26596,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	7744974	7758627	chr21:7744974-7758627	1	+	7748975	7755116	789624	4	64,89,167,523,	0,3924,9977,13130,
#Partially deleted in new
chr21	7744982	7772253	chr21:7744982-7772253	1	+	7748975	7771572	789624	4	56,89,189,687,	0,3916,24204,26584,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	7745038	7756113	chr21:7745038-7756113	1	+	7748975	7755116	8553170	3	612,89,1162,	0,3860,9913,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	7745074	7758629	chr21:7745074-7758629	1	+	7748975	7755116	8553170	4	293,89,167,525,	0,3824,9877,13030,
#Partially deleted in new
chr21	7748898	7777853	chr21:7748898-7777853	3	+	7748975	7755116	8553170	5	89,167,189,390,186,	0,6053,20288,25300,28769,
#Deleted in new
chr21	7768883	7770591	chr21:7768883-7770591	3	-	7769792	7770548	8553170	1	1708,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	7784481	7789509	chr21:7784481-7789509	0	-	7785872	7789509	789624	2	1419,36,	0,4992,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	7785186	7789509	chr21:7785186-7789509	0	-	7789205	7789509	789624	2	714,649,	0,3674,
#Partially deleted in new
chr21	7788702	7793954	chr21:7788702-7793954	3	-	7789205	7793827	789624	2	916,134,	0,5118,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	7816674	7829926	chr21:7816674-7829926	1	-	7819232	7819622	789624	3	2998,111,40,	0,11967,13212,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	7816677	7829592	chr21:7816677-7829592	3	-	7819232	7819631	789624	3	2995,83,76,	0,11964,12839,
#Partially deleted in new
chr21	7819043	7829587	chr21:7819043-7829587	1	-	7819232	7819631	789624	3	629,111,71,	0,9598,10473,
#Partially deleted in new
chr21	7819360	7825797	chr21:7819360-7825797	0	-	7819360	7819631	789624	2	312,424,	0,6013,
#Deleted in new
chr21	7826097	7826225	chr21:7826097-7826225	3	-	7826097	7826097	8553170	1	128,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	8101250	8103706	chr21:8101250-8103706	3	-	8101250	8101250	8553170	1	2456,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	8197619	8227646	chr21:8197619-8227646	3	+	8197619	8197619	8553170	7	308,315,97,1001,92,218,467,	0,3118,25341,25565,26727,28554,29560,
#Deleted in new
chr21	8205314	8205406	chr21:8205314-8205406	3	+	8205314	8205314	5263520	1	92,	0,
#Deleted in new
chr21	8205850	8205940	chr21:8205850-8205940	3	+	8205850	8205850	8553170	1	90,	0,
#Deleted in new
chr21	8208472	8208652	chr21:8208472-8208652	3	+	8208472	8208472	5263520	1	180,	0,
#Deleted in new
chr21	8208843	8208904	chr21:8208843-8208904	3	+	8208843	8208843	5263520	1	61,	0,
#Deleted in new
chr21	8212571	8212724	chr21:8212571-8212724	3	+	8212571	8212571	789624	1	153,	0,
#Deleted in new
chr21	8249504	8249596	chr21:8249504-8249596	3	+	8249504	8249504	5263520	1	92,	0,
#Deleted in new
chr21	8250059	8250149	chr21:8250059-8250149	3	+	8250059	8250059	8553170	1	90,	0,
#Deleted in new
chr21	8256780	8256933	chr21:8256780-8256933	3	+	8256780	8256780	789624	1	153,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	8380664	8410645	chr21:8380664-8410645	3	+	8380664	8380664	8553170	7	308,315,97,1001,92,218,467,	0,3119,25295,25519,26681,28508,29514,
#Deleted in new
chr21	8388361	8388453	chr21:8388361-8388453	3	+	8388361	8388361	5263520	1	92,	0,
#Deleted in new
chr21	8388897	8388987	chr21:8388897-8388987	3	+	8388897	8388897	8553170	1	90,	0,
#Deleted in new
chr21	8395606	8395759	chr21:8395606-8395759	3	+	8395606	8395606	789624	1	153,	0,
#Deleted in new
chr21	8432529	8432621	chr21:8432529-8432621	3	+	8432529	8432529	5263520	1	92,	0,
#Deleted in new
chr21	8433084	8433174	chr21:8433084-8433174	3	+	8433084	8433084	8553170	1	90,	0,
#Deleted in new
chr21	8439822	8439975	chr21:8439822-8439975	3	+	8439822	8439822	789624	1	153,	0,
#Deleted in new
chr21	8603546	8603984	chr21:8603546-8603984	7	+	8603546	8603546	16724991	1	438,	0,
#Deleted in new
chr21	8680537	8680934	chr21:8680537-8680934	7	-	8680537	8680537	16724991	1	397,	0,
#Deleted in new
chr21	8701460	8701562	chr21:8701460-8701562	7	+	8701460	8701460	16724991	1	102,	0,
#Deleted in new
chr21	8759076	8761335	chr21:8759076-8761335	3	+	8759076	8759076	8553170	2	785,60,	0,2199,
#Deleted in new
chr21	8759080	8761335	chr21:8759080-8761335	0	+	8759080	8759080	8553170	2	181,60,	0,2195,
#Deleted in new
chr21	8801361	8801880	chr21:8801361-8801880	7	-	8801361	8801361	16724991	1	519,	0,
#Deleted in new
chr21	8845565	8846646	chr21:8845565-8846646	7	+	8845565	8845565	16724991	1	1081,	0,
#Partially deleted in new
chr21	8857259	8880976	chr21:8857259-8880976	7	+	8857259	8857259	16724991	9	59,70,82,29,73,71,164,180,965,	0,2737,6741,9611,9731,15757,19871,21404,22752,
#Deleted in new
chr21	8986998	8987178	chr21:8986998-8987178	3	+	8986998	8986998	5263520	1	180,	0,
#Deleted in new
chr21	8987369	8987430	chr21:8987369-8987430	3	+	8987369	8987369	5263520	1	61,	0,
#Partially deleted in new
chr21	8996495	9018670	chr21:8996495-9018670	3	-	8996495	8996495	8553170	2	104,123,	0,22052,
#Deleted in new
chr21	9026820	9027329	chr21:9026820-9027329	7	-	9026820	9026820	16724991	1	509,	0,
#Partially deleted in new
chr21	9053121	9059060	chr21:9053121-9059060	7	+	9053121	9053121	16724991	2	272,238,	0,5701,
#Partially deleted in new
chr21	9068360	9129752	chr21:9068360-9129752	7	-	9068360	9068360	16724991	4	1239,231,59,70,	0,1853,59128,61322,
#Deleted in new
chr21	9068413	9073609	chr21:9068413-9073609	5	-	9068413	9068413	16724991	6	216,155,231,121,74,515,	0,1031,1800,2714,3195,4681,
#Deleted in new
chr21	9082600	9083101	chr21:9082600-9083101	7	-	9082600	9082600	16724991	1	501,	0,
#Deleted in new
chr21	9088187	9088391	chr21:9088187-9088391	7	+	9088187	9088187	16724991	1	204,	0,
#Deleted in new
chr21	9325023	9327299	chr21:9325023-9327299	0	+	9325023	9325023	8553170	2	200,60,	0,2216,
#Deleted in new
chr21	9325051	9327298	chr21:9325051-9327298	0	+	9325051	9325051	8553170	3	49,88,59,	0,822,2188,
#Deleted in new
chr21	9325058	9327777	chr21:9325058-9327777	1	+	9325058	9325058	8553170	2	42,538,	0,2181,
#Deleted in new
chr21	9325366	9327299	chr21:9325366-9327299	0	+	9325366	9325366	8553170	2	457,60,	0,1873,
#Deleted in new
chr21	9364466	9365225	chr21:9364466-9365225	7	-	9364466	9364466	16724991	1	759,	0,
#Partially deleted in new
chr21	9369284	9376645	chr21:9369284-9376645	7	-	9369284	9369284	16724991	4	42,220,212,294,	0,4662,6223,7067,
#Deleted in new
chr21	9558969	9559155	chr21:9558969-9559155	7	+	9558969	9558969	16724991	1	186,	0,
#Deleted in new
chr21	9580023	9580415	chr21:9580023-9580415	7	-	9580023	9580023	16724991	1	392,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	9646824	9647000	chr21:9646824-9647000	3	+	9646824	9646824	8553170	1	176,	0,
#Partially deleted in new
chr21	9781917	9812602	chr21:9781917-9812602	3	-	9781917	9781917	789624	6	387,58,88,240,188,176,	0,1330,10637,25817,26256,30509,
#Deleted in new
chr21	9806093	9814009	chr21:9806093-9814009	1	-	9806093	9806093	8553170	3	1009,240,173,	0,1641,7743,
#Deleted in new
chr21	9806874	9809723	chr21:9806874-9809723	1	-	9806874	9806874	8553170	5	228,86,188,115,51,	0,860,1299,2192,2798,
#Deleted in new
chr21	9810380	9810503	chr21:9810380-9810503	7	-	9810380	9810380	16724991	1	123,	0,
#Deleted in new
chr21	9810500	9810848	chr21:9810500-9810848	7	+	9810500	9810500	16724991	1	348,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	9902343	9902627	chr21:9902343-9902627	3	-	9902343	9902343	8553170	1	284,	0,
#Deleted in new
chr21	9907915	9908010	chr21:9907915-9908010	3	+	9907915	9907915	8553170	1	95,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	9913116	9914713	chr21:9913116-9914713	0	+	9913116	9913116	8553170	2	390,307,	0,1290,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	9913360	9914846	chr21:9913360-9914846	3	+	9913360	9913360	8553170	3	146,90,440,	0,732,1046,
#Deleted in new
chr21	9997486	9998033	chr21:9997486-9998033	5	-	9997486	9997486	16724991	1	547,	0,
#Deleted in new
chr21	10028360	10029855	chr21:10028360-10029855	3	-	10028360	10028360	8553170	1	1495,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	10122272	10129029	chr21:10122272-10129029	3	+	10122272	10122272	8553170	2	60,1882,	0,4875,
#Deleted in new
chr21	10136418	10137004	chr21:10136418-10137004	7	+	10136418	10136418	16724991	1	586,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	10328410	10342669	chr21:10328410-10342669	3	-	10328410	10328410	8553170	4	628,112,65,54,	0,10044,12003,14205,
#Partially deleted in new
chr21	10328935	10342737	chr21:10328935-10342737	0	-	10328935	10328935	8553170	2	103,122,	0,13680,
#Deleted in new
chr21	10330731	10331537	chr21:10330731-10331537	7	+	10330731	10330731	16724991	1	806,	0,
#Partially deleted in new
chr21	10357399	10358620	chr21:10357399-10358620	7	+	10357399	10357399	16724991	2	237,666,	0,555,
#Partially deleted in new
chr21	10397643	10397778	chr21:10397643-10397778	7	+	10397643	10397643	16724991	1	135,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	10413476	10452529	chr21:10413476-10452529	5	+	10413476	10413476	16724991	3	278,101,1103,	0,1334,37950,
#Partially deleted in new
chr21	10413531	10491615	chr21:10413531-10491615	4	+	10413531	10413531	16724991	10	223,101,163,172,115,702,120,117,102,76,	0,1279,40602,49304,51330,59496,69208,72086,77714,78008,
#Partially deleted in new
chr21	10454133	10516431	chr21:10454133-10516431	7	+	10454133	10454133	16724991	15	163,172,115,720,120,117,102,105,187,165,110,66,213,129,114,	0,8702,10728,18876,28606,31484,37112,37406,42779,43221,44723,45341,46673,59988,62184,
#Partially deleted in new
chr21	10482737	10605716	chr21:10482737-10605716	3	+	10482737	10482737	8553170	32	122,117,102,105,197,165,130,66,213,129,120,109,58,54,54,54,60,51,162,120,100,64,65,61,82,89,62,81,80,93,71,300,	0,2880,8508,8802,14175,14617,16119,16737,18069,31384,33580,41842,44617,55943,58374,59657,69919,76756,78292,84932,86699,86945,87747,94722,95599,95779,107724,109555,115277,119320,120824,122679,
#Partially deleted in new
chr21	10521552	10606140	chr21:10521552-10606140	1	+	10538723	10605552	789624	23	142,109,58,54,54,54,60,51,162,120,100,64,65,61,82,89,62,81,106,80,93,71,724,	0,3027,5802,17128,19559,20842,31104,37941,39477,46117,47884,48130,48932,55907,56784,56964,68909,70740,74429,76462,80505,82009,83864,
#Partially deleted in new
chr21	10521571	10567699	chr21:10521571-10567699	0	+	10538723	10567699	789624	10	123,109,58,54,54,54,60,51,162,30,	0,3008,5783,17109,19540,21757,31085,37922,39458,46098,
#Partially deleted in new
chr21	10521574	10605716	chr21:10521574-10605716	1	+	10538723	10605552	789624	22	120,109,58,54,54,54,51,162,120,100,64,65,61,82,89,62,81,106,80,93,71,300,	0,3005,5780,17106,19537,20820,37919,39455,46095,47862,48108,48910,55885,56762,56942,68887,70718,74407,76440,80483,81987,83842,
#Partially deleted in new
chr21	10521574	10605716	chr21:10521574-10605716	1	+	10561159	10605552	789624	19	120,109,58,51,162,120,100,64,65,61,82,89,62,81,106,80,93,71,300,	0,3005,5780,37919,39455,46095,47862,48108,48910,55885,56762,56942,68887,70718,74407,76440,80483,81987,83842,
#Partially deleted in new
chr21	10521574	10605716	chr21:10521574-10605716	3	+	10538723	10605552	789624	24	120,109,58,54,54,54,54,60,51,162,120,100,64,65,61,82,89,62,81,106,80,93,71,300,	0,3005,5780,17106,19537,20820,21754,31082,37919,39455,46095,47862,48108,48910,55885,56762,56942,68887,70718,74407,76440,80483,81987,83842,
#Deleted in new
chr21	10576291	10576587	chr21:10576291-10576587	7	+	10576291	10576291	16724991	1	296,	0,
#Deleted in new
chr21	10612454	10613379	chr21:10612454-10613379	7	-	10612454	10612454	16724991	2	122,167,	0,758,
#Deleted in new
chr21	10640027	10640338	chr21:10640027-10640338	7	-	10640027	10640027	16724991	1	311,	0,
#Deleted in new
chr21	10649399	10649835	chr21:10649399-10649835	3	-	10649399	10649835	789624	2	307,46,	0,390,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	12999675	13016692	chr21:12999675-13016692	3	-	12999675	12999675	8553170	2	251,72,	0,16945,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	13038159	13052118	chr21:13038159-13052118	5	+	13038159	13038159	16724991	5	265,115,2492,65,323,	0,4342,4619,10805,13636,
#Partially deleted in new
chr21	13038207	13067033	chr21:13038207-13067033	7	+	13038207	13038207	16724991	11	217,115,174,108,138,65,94,307,68,142,182,	0,4294,4571,6955,8028,10757,13588,22369,26967,27350,28644,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	13038329	13046421	chr21:13038329-13046421	4	+	13038329	13038329	16724991	2	95,1259,	0,6833,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	13042783	13052118	chr21:13042783-13052118	4	+	13042783	13042783	16724991	4	169,108,65,323,	0,2379,6181,9012,
#Deleted in new
chr21	13047582	13047689	chr21:13047582-13047689	3	+	13047582	13047582	8553170	1	107,	0,
#Partially deleted in new
chr21	13095304	13113790	chr21:13095304-13113790	7	-	13095304	13095304	16724991	3	3022,68,126,	0,17776,18360,
#Deleted in new
chr21	13120243	13120807	chr21:13120243-13120807	7	+	13120243	13120243	16724991	1	564,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	13305151	13314944	chr21:13305151-13314944	3	+	13305151	13305151	8553170	2	70,537,	0,9256,
#Partially deleted in new
chr21	13349264	13350648	chr21:13349264-13350648	7	+	13349264	13349264	16724991	2	104,192,	0,1192,
#Partially deleted in new
chr21	13384248	13427773	chr21:13384248-13427773	7	-	13384248	13384248	16724991	18	912,164,214,73,29,90,62,79,73,31,73,29,91,62,73,29,73,29,	0,2033,3474,9297,9468,11719,14721,15108,20932,24071,29347,29513,37351,38878,41897,42063,43331,43496,
#Deleted in new
chr21	13406383	13406460	chr21:13406383-13406460	3	-	13406383	13406383	5263520	1	77,	0,
#Partially deleted in new
chr21	13443372	13489176	chr21:13443372-13489176	7	-	13443372	13443372	16724991	6	59,76,186,134,143,99,	0,7937,8184,8818,14417,45705,
#Deleted in new
chr21	13476370	13477263	chr21:13476370-13477263	7	+	13476370	13476370	16724991	1	893,	0,
#Deleted in new
chr21	13525598	13528579	chr21:13525598-13528579	7	+	13525598	13525598	16724991	1	2981,	0,
#Deleted in new
chr21	13544209	13545185	chr21:13544209-13545185	7	-	13544209	13544209	16724991	1	976,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	13546032	13558461	chr21:13546032-13558461	3	+	13546032	13546032	789624	4	91,149,119,145,	0,947,10360,12284,
#Deleted in new
chr21	13581059	13582004	chr21:13581059-13582004	7	-	13581059	13581059	16724991	1	945,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr21	13609857	13625542	chr21:13609857-13625542	1	+	13610228	13624332	789624	8	892,115,174,107,138,71,221,270,	0,5265,5539,8491,10300,12947,14455,15415,
#Partially deleted in new
chr21	13610176	13641585	chr21:13610176-13641585	3	+	13610228	13641566	789624	11	573,115,174,107,138,71,71,45,167,124,241,	0,4946,5220,8172,9981,12628,18205,19679,20764,29338,31168,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	13621576	13621683	chr21:13621576-13621683	3	+	13621576	13621576	8553170	1	107,	0,
#Deleted in new
chr21	13644774	13644850	chr21:13644774-13644850	3	-	13644774	13644774	5263520	1	76,	0,
#Deleted in new
chr21	13654072	13654356	chr21:13654072-13654356	7	+	13654072	13654072	16724991	1	284,	0,
#Deleted in new
chr21	13665867	13667546	chr21:13665867-13667546	7	-	13665867	13665867	16724991	2	662,448,	0,1231,
#Deleted in new
chr21	13676021	13677116	chr21:13676021-13677116	7	+	13676021	13676021	16724991	1	1095,	0,
#Deleted in new
chr21	13679299	13681138	chr21:13679299-13681138	3	-	13679299	13679299	8553170	1	1839,	0,
#Deleted in new
chr21	13704852	13705518	chr21:13704852-13705518	7	+	13704852	13704852	16724991	1	666,	0,
#Deleted in new
chr21	13724188	13724274	chr21:13724188-13724274	3	+	13724188	13724188	5263520	1	86,	0,
#Deleted in new
chr21	13762337	13764332	chr21:13762337-13764332	7	+	13762337	13762337	16724991	1	1995,	0,
#Deleted in new
chr21	13769931	13771740	chr21:13769931-13771740	3	+	13769931	13769931	8553170	2	282,176,	0,1633,
#Deleted in new
chr21	13776085	13777266	chr21:13776085-13777266	7	+	13776085	13776085	16724991	1	1181,	0,
#Deleted in new
chr21	13792634	13793141	chr21:13792634-13793141	7	+	13792634	13792634	16724991	1	507,	0,
#Deleted in new
chr21	13824405	13825635	chr21:13824405-13825635	7	-	13824405	13824405	16724991	1	1230,	0,
#Deleted in new
chr21	13826695	13827627	chr21:13826695-13827627	7	+	13826695	13826695	16724991	1	932,	0,
#Deleted in new
chr21	13839117	13839409	chr21:13839117-13839409	7	+	13839117	13839117	16724991	1	292,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	13843132	13848364	chr21:13843132-13848364	7	-	13843132	13843132	16724991	6	300,114,270,129,191,275,	0,889,1872,2880,3626,4957,
#Deleted in new
chr21	13846758	13847713	chr21:13846758-13847713	5	-	13846758	13846758	16724991	3	121,61,264,	0,304,691,
#Deleted in new
chr21	13846758	13848205	chr21:13846758-13848205	4	-	13846758	13846758	16724991	3	365,143,116,	0,691,1331,
#Deleted in new
chr21	13905959	13906488	chr21:13905959-13906488	7	-	13905959	13905959	16724991	1	529,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	13909573	13935655	chr21:13909573-13935655	5	-	13909573	13909573	16724991	7	120,54,46,282,130,147,141,	0,922,2144,7981,15590,22654,25941,
#Partially deleted in new
chr21	13909573	13979911	chr21:13909573-13979911	7	-	13909573	13909573	16724991	25	81,54,46,223,212,282,130,113,147,390,533,183,164,71,73,29,85,70,31,56,138,107,174,115,210,	0,922,2144,5613,7173,7981,15590,17761,22654,24264,27961,29672,31241,35465,41493,41658,44492,48542,51235,57807,60399,61593,65610,65946,70128,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	13936992	13937325	chr21:13936992-13937325	7	-	13936992	13936992	16724991	1	333,	0,
#Partially deleted in new
chr21	13937945	13970003	chr21:13937945-13970003	4	-	13937945	13937945	16724991	7	122,183,164,71,73,29,31,	0,1300,2869,7093,13121,13286,32027,
#Partially deleted in new
chr21	13939373	13962785	chr21:13939373-13962785	4	-	13939373	13939373	16724991	6	55,164,105,73,29,46,	0,1441,5665,11693,11858,23366,
#Partially deleted in new
chr21	13943743	13972129	chr21:13943743-13972129	4	-	13943743	13943743	16724991	8	119,71,73,29,132,56,138,134,	0,1295,7323,7488,18996,23637,26229,28252,
#Partially deleted in new
chr21	13943768	13980437	chr21:13943768-13980437	5	-	13943768	13943768	16724991	6	94,71,73,29,85,736,	0,1270,7298,7463,10297,35933,
#Deleted in new
chr21	13968488	13968595	chr21:13968488-13968595	3	-	13968488	13968488	8553170	1	107,	0,
#Partially deleted in new
chr21	14000926	14005279	chr21:14000926-14005279	7	+	14000926	14000926	16724991	4	174,121,75,80,	0,615,983,4273,
#Deleted in new
chr21	14007133	14014880	chr21:14007133-14014880	7	+	14007133	14007133	16724991	11	65,116,85,75,98,58,115,163,155,88,257,	0,1053,2455,3109,3643,4228,4562,4986,6369,6627,7490,
#Deleted in new
chr21	14019059	14020725	chr21:14019059-14020725	7	-	14019059	14019059	16724991	4	518,79,78,181,	0,800,1111,1485,
#Partially deleted in new
chr21	14027420	14144468	chr21:14027420-14144468	3	+	14027420	14027420	8553170	3	177,195,960,	0,56529,116088,
#Partially deleted in new
chr21	14027420	14144468	chr21:14027420-14144468	0	+	14027420	14027420	8553170	3	177,195,712,	0,56529,116336,
#Partially deleted in new
chr21	14027450	14089046	chr21:14027450-14089046	0	+	14027450	14027450	8553170	3	147,195,438,	0,56499,61158,
#Partially deleted in new
chr21	14064324	14069087	chr21:14064324-14069087	7	+	14064324	14064324	16724991	3	203,115,174,	0,4312,4589,
#Deleted in new
chr21	14070870	14070986	chr21:14070870-14070986	7	+	14070870	14070870	16724991	1	116,	0,
#Deleted in new
chr21	14075949	14076038	chr21:14075949-14076038	3	-	14075949	14075949	8553170	1	89,	0,
#Partially deleted in new
chr21	14108812	14206949	chr21:14108812-14206949	3	-	14108992	14206923	789624	10	268,177,112,105,168,90,102,109,386,135,	0,35810,43760,54606,56410,57549,72945,77148,80221,98002,
#Partially deleted in new
chr21	14108892	14210891	chr21:14108892-14210891	1	-	14108992	14210818	789624	10	188,177,112,105,168,90,102,109,386,92,	0,35730,43680,54526,56330,57469,72865,77068,80141,101907,
#Partially deleted in new
chr21	14108892	14210891	chr21:14108892-14210891	1	-	14108992	14210818	789624	9	188,177,112,105,168,102,109,386,92,	0,35730,43680,54526,56330,72865,77068,80141,101907,
#Deleted in new
chr21	14143580	14144158	chr21:14143580-14144158	7	+	14143580	14143580	16724991	1	578,	0,
#Partially deleted in new
chr21	14165250	14189103	chr21:14165250-14189103	0	-	14165250	14189103	789624	4	140,102,109,70,	0,16507,20710,23783,
#Partially deleted in new
chr21	14216129	14228372	chr21:14216129-14228372	0	+	14216129	14216129	789624	5	153,173,73,100,1493,	0,3423,4967,8308,10750,
#Partially deleted in new
chr21	14216144	14227054	chr21:14216144-14227054	0	+	14216144	14216144	8553170	5	138,173,73,100,196,	0,3408,4952,8293,10714,
#Partially deleted in new
chr21	14216152	14228173	chr21:14216152-14228173	0	+	14216152	14216152	789624	4	130,73,100,1294,	0,4944,8285,10727,
#Partially deleted in new
chr21	14216153	14221453	chr21:14216153-14221453	0	+	14216153	14216153	8553170	3	129,163,357,	0,3409,4943,
#Partially deleted in new
chr21	14216177	14228372	chr21:14216177-14228372	3	+	14216186	14227293	0	5	105,163,73,100,1493,	0,3385,4919,8260,10702,
#Partially deleted in new
chr21	14224374	14227384	chr21:14224374-14227384	0	+	14224374	14224374	8553170	2	163,505,	0,2505,
#Partially deleted in new
chr21	14273798	14338017	chr21:14273798-14338017	4	+	14273798	14273798	16724991	14	359,62,148,143,178,147,85,67,188,1435,76,178,61,237,	0,5797,13751,14605,17771,31897,34572,34754,39145,42402,49713,62281,63381,63982,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	14273879	14299685	chr21:14273879-14299685	4	+	14273879	14273879	16724991	5	278,62,148,3344,248,	0,5716,13670,14524,25558,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	14273890	14301386	chr21:14273890-14301386	4	+	14273890	14273890	16724991	6	267,62,148,143,178,1949,	0,5705,13659,14513,17679,25547,
#Partially deleted in new
chr21	14273935	14291399	chr21:14273935-14291399	4	+	14273935	14273935	16724991	5	222,62,148,143,114,	0,5660,13614,14468,17350,
#Partially deleted in new
chr21	14274091	14362754	chr21:14274091-14362754	7	+	14274091	14274091	16724991	28	66,62,148,143,178,244,66,138,147,85,67,127,177,168,163,76,61,220,155,156,200,127,102,144,160,164,195,103,	0,5504,13458,14312,17478,25346,27983,30131,31604,34279,34461,34880,38852,42109,43381,49420,63088,63689,71064,73924,78537,79462,80949,83639,85058,86748,87940,88560,
#Partially deleted in new
chr21	14371114	14383187	chr21:14371114-14383187	3	-	14373616	14383119	789624	5	3170,168,214,341,93,	0,4537,7084,10088,11980,
#Partially deleted in new
chr21	14378341	14383484	chr21:14378341-14383484	0	-	14378341	14378341	8553170	3	71,341,208,	0,2861,4935,
#Partially deleted in new
chr21	14485227	14546341	chr21:14485227-14546341	1	-	14485911	14546261	0	4	887,151,207,137,	0,13214,15301,60977,
#Partially deleted in new
chr21	14485227	14546343	chr21:14485227-14546343	3	-	14485911	14546261	0	8	887,151,207,152,130,150,72,139,	0,13214,15301,25082,27216,31664,35922,60977,
#Partially deleted in new
chr21	14485227	14583402	chr21:14485227-14583402	0	-	14485227	14485227	8553170	9	887,151,207,152,130,150,72,353,83,	0,13214,15301,25082,27216,31664,35922,96908,98092,
#Partially deleted in new
chr21	14485227	14658821	chr21:14485227-14658821	1	-	14485911	14658771	789624	16	887,151,207,152,130,150,72,353,127,66,77,87,38,41,132,74,	0,13214,15301,25082,27216,31664,35922,96908,98422,108785,116795,124254,127648,130748,157774,173520,
#Partially deleted in new
chr21	14485228	14583402	chr21:14485228-14583402	1	-	14485911	14582396	0	9	886,151,207,152,130,150,72,353,83,	0,13213,15300,25081,27215,31663,35921,96907,98091,
#Partially deleted in new
chr21	14485228	14546360	chr21:14485228-14546360	1	-	14485911	14516963	789624	9	886,151,207,152,130,150,72,124,156,	0,13213,15300,25081,27215,31663,35921,38042,60976,
#Partially deleted in new
chr21	14495699	14500606	chr21:14495699-14500606	0	-	14495699	14495699	8553170	3	704,151,78,	0,2742,4829,
#Partially deleted in new
chr21	14521172	14546313	chr21:14521172-14546313	0	-	14521172	14521172	8553170	3	49,124,109,	0,2098,25032,
#Partially deleted in new
chr21	14582201	14598303	chr21:14582201-14598303	3	+	14582201	14582201	5263520	5	90,177,147,47,379,	0,3160,9120,12492,15723,
#Partially deleted in new
chr21	14591929	14643133	chr21:14591929-14643133	0	-	14591929	14591929	8553170	7	710,66,77,87,38,41,132,	0,2083,10093,17552,20946,24046,51072,
#Partially deleted in new
chr21	14593719	14658821	chr21:14593719-14658821	0	-	14593719	14593719	8553170	7	359,77,87,38,41,132,74,	0,8303,15762,19156,22256,49282,65028,
#Partially deleted in new
chr21	14612504	14616016	chr21:14612504-14616016	0	-	14612504	14612504	8553170	2	409,41,	0,3471,
#Partially deleted in new
chr21	14612504	14616016	chr21:14612504-14616016	0	-	14612504	14612504	8553170	3	141,38,41,	0,371,3471,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	14746761	14753863	chr21:14746761-14753863	3	-	14746761	14746761	8553170	3	1614,47,63,	0,4101,7039,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	14747745	14753462	chr21:14747745-14753462	0	-	14747745	14747745	8553170	3	630,47,139,	0,3117,5578,
#Partially deleted in new
chr21	14757587	14758352	chr21:14757587-14758352	7	+	14757587	14757587	16724991	1	765,	0,
#Deleted in new
chr21	14761709	14763090	chr21:14761709-14763090	3	-	14761709	14761709	8553170	2	442,253,	0,1128,
#Deleted in new
chr21	14774300	14775262	chr21:14774300-14775262	7	+	14774300	14774300	16724991	1	962,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	14818842	15014430	chr21:14818842-15014430	3	-	14818842	14818842	8553170	4	5573,102,167,87,	0,6680,38699,195501,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	14819698	14823309	chr21:14819698-14823309	1	-	14819698	14819698	8553170	2	332,192,	0,3419,
#Deleted in new
chr21	14821207	14821806	chr21:14821207-14821806	0	-	14821207	14821207	8553170	1	599,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	14824253	14833656	chr21:14824253-14833656	1	-	14824253	14824253	8553170	3	162,102,153,	0,1269,9250,
#Partially deleted in new
chr21	14824326	14918552	chr21:14824326-14918552	3	-	14824326	14824326	8553170	4	89,102,167,382,	0,1196,33215,93844,
#Deleted in new
chr21	14829153	14829989	chr21:14829153-14829989	7	-	14829153	14829153	16724991	1	836,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	14837181	14881910	chr21:14837181-14881910	1	-	14837181	14837181	8553170	4	642,158,167,24,	0,16092,20360,44705,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	14852970	14881975	chr21:14852970-14881975	1	-	14852970	14852970	8553170	3	461,167,89,	0,4571,28916,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	14918533	14947096	chr21:14918533-14947096	3	+	14918533	14918533	8553170	2	239,542,	0,28021,
#Partially deleted in new
chr21	14961234	15064805	chr21:14961234-15064805	1	-	14964715	14968192	0	4	7292,123,80,61,	0,53109,82260,103510,
#Partially deleted in new
chr21	14961234	15064934	chr21:14961234-15064934	1	-	14964715	14968192	0	3	7292,80,190,	0,82260,103510,
#Partially deleted in new
chr21	14961234	15065000	chr21:14961234-15065000	3	-	14964715	14968192	0	3	7292,123,256,	0,53109,103510,
#Deleted in new
chr21	14961308	14964233	chr21:14961308-14964233	3	+	14961308	14961308	8553170	2	413,149,	0,2776,
#Partially deleted in new
chr21	14967995	15002368	chr21:14967995-15002368	0	-	14967995	14968192	789624	2	531,189,	0,34184,
#Partially deleted in new
chr21	14968154	15065815	chr21:14968154-15065815	0	-	14968154	14968192	789624	3	372,80,91,	0,75340,97570,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	14971469	14992854	chr21:14971469-14992854	3	+	14971469	14971469	8553170	3	100,103,621,	0,2745,20764,
#Partially deleted in new
chr21	14987953	15065903	chr21:14987953-15065903	0	-	14987953	14987953	8553170	3	239,80,179,	0,55541,77771,
#Partially deleted in new
chr21	14988140	15065936	chr21:14988140-15065936	0	-	14988140	14988140	8553170	5	52,106,123,80,212,	0,3060,26203,55354,77584,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	15050188	15052379	chr21:15050188-15052379	3	+	15050188	15050188	8553170	1	2191,	0,
#Deleted in new
chr21	15067069	15067837	chr21:15067069-15067837	3	+	15067069	15067069	8553170	2	143,303,	0,465,
#Deleted in new
chr21	15346651	15346738	chr21:15346651-15346738	3	+	15346651	15346651	8553170	1	87,	0,
#Partially deleted in new
chr21	15370499	15444366	chr21:15370499-15444366	0	-	15370499	15370499	8553170	7	412,41,34,130,35,52,343,	0,20078,23973,24500,24963,29998,73524,
#Partially deleted in new
chr21	15370510	15444723	chr21:15370510-15444723	1	-	15370510	15370510	8553170	9	401,68,41,34,130,35,52,58,350,	0,15111,20067,23962,24489,24952,29987,73513,73863,
#Partially deleted in new
chr21	15370521	15402305	chr21:15370521-15402305	0	-	15370521	15370521	8553170	7	390,41,34,130,35,52,318,	0,20056,23951,24478,24941,29976,31466,
#Deleted in new
chr21	15436681	15442362	chr21:15436681-15442362	1	-	15436681	15436681	8553170	3	220,110,197,	0,4544,5484,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	15490529	15490767	chr21:15490529-15490767	7	-	15490529	15490529	16724991	1	238,	0,
#Deleted in new
chr21	15493931	15496124	chr21:15493931-15496124	3	-	15493931	15493931	8553170	2	967,409,	0,1784,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	15522858	15627162	chr21:15522858-15627162	1	-	15522858	15522858	8553170	3	3865,141,117,	0,52411,104187,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	15560715	15627342	chr21:15560715-15627342	1	-	15560715	15560715	8553170	5	18,312,165,141,297,	0,485,10476,14554,66330,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	15567181	15627115	chr21:15567181-15627115	0	-	15567181	15567181	8553170	4	807,165,141,70,	0,4010,8088,59864,
#Deleted in new
chr21	15614282	15614389	chr21:15614282-15614389	3	+	15614282	15614282	8553170	1	107,	0,
#Partially deleted in new
chr21	15694299	15696581	chr21:15694299-15696581	7	-	15694299	15694299	16724991	2	455,697,	0,1585,
#Partially deleted in new
chr21	15730024	15878911	chr21:15730024-15878911	3	+	15730393	15878475	0	24	414,78,145,124,163,87,138,77,74,149,128,96,162,227,71,229,201,143,179,79,80,124,196,609,	0,32866,35972,47879,61477,69732,75096,78784,81112,88673,94014,94941,96179,96952,100506,101376,103323,112373,134243,136241,140043,144378,147771,148278,
#Partially deleted in new
chr21	15730024	15880058	chr21:15730024-15880058	1	+	15730393	15878475	0	25	414,78,145,124,163,87,138,77,74,149,128,96,162,227,71,229,201,143,96,179,79,80,124,196,1756,	0,32866,35972,47879,61477,69732,75096,78784,81112,88673,94014,94941,96179,96952,100506,101376,103323,112373,119752,134243,136241,140043,144378,147771,148278,
#Partially deleted in new
chr21	15730024	15878911	chr21:15730024-15878911	1	+	15730393	15878475	789624	11	414,78,145,124,163,87,138,80,124,196,609,	0,32866,35972,47879,61477,69732,75096,140043,144378,147771,148278,
#Partially deleted in new
chr21	15730024	15880069	chr21:15730024-15880069	1	+	15730393	15878475	0	26	414,78,145,124,163,87,138,77,74,149,128,96,162,227,71,229,201,143,114,96,179,79,80,124,196,1767,	0,32866,35972,47879,61477,69732,75096,78784,81112,88673,94014,94941,96179,96952,100506,101376,103323,112373,117638,119752,134243,136241,140043,144378,147771,148278,
#Partially deleted in new
chr21	15744003	15745080	chr21:15744003-15745080	7	-	15744003	15744003	16724991	2	313,189,	0,888,
#Partially deleted in new
chr21	15773255	15818729	chr21:15773255-15818729	0	+	15773255	15773255	8553170	8	62,124,163,87,138,77,74,32,	0,4648,18246,26501,31865,35553,37881,45442,
#Partially deleted in new
chr21	15773255	15818729	chr21:15773255-15818729	0	+	15773255	15773255	8553170	6	62,124,163,87,138,32,	0,4648,18246,26501,31865,45442,
#Partially deleted in new
chr21	15799533	15805655	chr21:15799533-15805655	0	+	15799533	15799533	8553170	2	310,535,	0,5587,
#Partially deleted in new
chr21	15825009	15833379	chr21:15825009-15833379	0	+	15825009	15833379	789624	5	52,227,71,229,32,	0,1967,5521,6391,8338,
#Partially deleted in new
chr21	15842517	15874518	chr21:15842517-15874518	0	+	15842517	15874518	789624	7	23,114,96,179,79,80,116,	0,5145,7259,21750,23748,27550,31885,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	15875995	15878911	chr21:15875995-15878911	0	+	15875995	15875995	8553170	2	1996,609,	0,2307,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	15928295	16488329	chr21:15928295-16488329	1	+	15928295	15928295	8553170	6	234,285,97,60,72,840,	0,142818,253295,302760,463318,559194,
#Partially deleted in new
chr21	16035412	16035509	chr21:16035412-16035509	3	-	16035412	16035412	8553170	1	97,	0,
#Partially deleted in new
chr21	16070521	16487508	chr21:16070521-16487508	0	+	16070521	16070521	8553170	6	27,285,97,60,72,19,	0,592,111069,160534,321092,416968,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr21	16070521	16609775	chr21:16070521-16609775	1	+	16070521	16070521	789624	8	27,285,97,60,49,61,115,2782,	0,592,111069,160534,416968,466857,523818,536472,
#Partially deleted in new
chr21	16070532	16487494	chr21:16070532-16487494	2	+	16070532	16070532	8553170	6	35,285,97,60,72,5,	0,581,111058,160523,321081,416957,
#Partially deleted in new
chr21	16071113	16607130	chr21:16071113-16607130	0	+	16071113	16071113	789624	6	285,97,60,72,49,137,	0,110477,159942,320500,416376,535880,
#Partially deleted in new
chr21	16071232	16607136	chr21:16071232-16607136	0	+	16071232	16071232	789624	7	166,97,60,72,49,61,143,	0,110358,159823,320381,416257,466146,535761,
#Deleted in new
chr21	16094414	16095372	chr21:16094414-16095372	7	-	16094414	16094414	16724991	1	958,	0,
#Deleted in new
chr21	16121309	16121644	chr21:16121309-16121644	7	-	16121309	16121309	16724991	1	335,	0,
#Partially deleted in new
chr21	16181590	16607118	chr21:16181590-16607118	0	+	16181590	16181590	789624	7	97,60,72,49,61,115,125,	0,49465,210023,305899,355788,412749,425403,
#Partially deleted in new
chr21	16194394	16607222	chr21:16194394-16607222	0	+	16194394	16194394	789624	6	239,60,72,49,61,229,	0,36661,197219,293095,342984,412599,
#Partially deleted in new
chr21	16194564	16487537	chr21:16194564-16487537	0	+	16194564	16194564	8553170	3	69,72,48,	0,197049,292925,
#Partially deleted in new
chr21	16231078	16607130	chr21:16231078-16607130	0	+	16231078	16231078	8553170	5	37,72,49,61,137,	0,160535,256411,306300,375915,
#Deleted in new
chr21	16284695	16284768	chr21:16284695-16284768	3	-	16284695	16284695	5263520	1	73,	0,
#Partially deleted in new
chr21	16330603	16607268	chr21:16330603-16607268	0	+	16330603	16330603	8553170	5	108,72,49,61,275,	0,61010,156886,206775,276390,
#Partially deleted in new
chr21	16419327	16607151	chr21:16419327-16607151	0	+	16419327	16419327	8553170	3	414,49,158,	0,68162,187666,
#Partially deleted in new
chr21	16419431	16487895	chr21:16419431-16487895	0	+	16419431	16419431	8553170	2	310,406,	0,68058,
#Partially deleted in new
chr21	16419517	16607103	chr21:16419517-16607103	0	+	16419517	16419517	789624	5	224,49,61,115,110,	0,67972,117861,174822,187476,
#Partially deleted in new
chr21	16420454	16607137	chr21:16420454-16607137	0	+	16420454	16420454	8553170	4	118,49,61,144,	0,67035,116924,186539,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	16525918	16527019	chr21:16525918-16527019	3	+	16525918	16525918	8553170	1	1101,	0,
#Partially deleted in new
chr21	16537280	16607249	chr21:16537280-16607249	0	+	16537280	16537280	8553170	3	159,115,256,	0,57059,69713,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr21	16537305	16645065	chr21:16537305-16645065	1	+	16537305	16537305	8553170	8	134,115,94,323,18,177,49,4836,	0,57034,69688,89871,90698,93490,94135,102924,
#Deleted in new
chr21	16539088	16539169	chr21:16539088-16539169	3	+	16539088	16539088	5263520	1	81,	0,
#Deleted in new
chr21	16539827	16539911	chr21:16539827-16539911	3	+	16539827	16539827	5263520	1	84,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	16574717	16582637	chr21:16574717-16582637	3	-	16574717	16574717	8553170	2	555,174,	0,7746,
#Partially deleted in new
chr21	16588688	16627195	chr21:16588688-16627195	0	+	16588688	16588688	8553170	5	59,188,115,94,19,	0,664,5651,18305,38488,
#Deleted in new
chr21	16590236	16590325	chr21:16590236-16590325	3	+	16590236	16590236	5263520	1	89,	0,
#Partially deleted in new
chr21	16630826	16640633	chr21:16630826-16640633	0	+	16630826	16630826	8553170	2	146,404,	0,9403,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	16718997	16719157	chr21:16718997-16719157	3	+	16718997	16718997	8553170	1	160,	0,
#Partially deleted in new
chr21	16862874	16873691	chr21:16862874-16873691	3	-	16862874	16862874	8553170	4	102,131,95,49,	0,2827,3707,10768,
#Partially deleted in new
chr21	17210468	17211347	chr21:17210468-17211347	7	-	17210468	17210468	16724991	1	879,	0,
#Partially deleted in new
chr21	17296218	17296596	chr21:17296218-17296596	7	+	17296218	17296218	16724991	1	378,	0,
#Deleted in new
chr21	17431546	17431647	chr21:17431546-17431647	3	+	17431546	17431546	8553170	1	101,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	17438889	17449185	chr21:17438889-17449185	3	+	17438889	17438889	789624	4	108,167,118,321,	0,2787,5193,9975,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	17441780	17448908	chr21:17441780-17448908	0	+	17441780	17441780	8553170	3	63,118,38,	0,2302,7090,
#Partially deleted in new
chr21	17500678	17500824	chr21:17500678-17500824	7	-	17500678	17500678	16724991	1	146,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	17506452	17506728	chr21:17506452-17506728	3	+	17506452	17506452	8553170	1	276,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	17512381	17570100	chr21:17512381-17570100	3	+	17513129	17565692	0	7	791,167,205,156,123,139,4673,	0,34645,39367,46594,48320,48956,53046,
#Partially deleted in new
chr21	17513045	17565852	chr21:17513045-17565852	1	+	17513129	17565615	0	5	127,167,205,156,425,	0,33981,38703,45930,52382,
#Partially deleted in new
chr21	17513129	17565487	chr21:17513129-17565487	1	+	17513129	17565487	0	3	43,167,60,	0,33897,52298,
#Partially deleted in new
chr21	17513129	17565615	chr21:17513129-17565615	1	+	17513129	17565615	0	4	43,167,205,188,	0,33897,38619,52298,
#Partially deleted in new
chr21	17513129	17593579	chr21:17513129-17593579	1	+	17513129	17593193	0	8	43,167,205,156,123,139,184,428,	0,33897,38619,45846,47572,48208,52298,80022,
#Partially deleted in new
chr21	17518525	17518993	chr21:17518525-17518993	7	-	17518525	17518525	16724991	1	468,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	17527139	17527247	chr21:17527139-17527247	3	-	17527139	17527139	8553170	1	108,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	17576797	17576906	chr21:17576797-17576906	3	+	17576797	17576797	8553170	1	109,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	17593652	17612844	chr21:17593652-17612844	1	-	17594092	17609144	789624	6	680,208,132,138,181,146,	0,4964,10492,11207,15319,19046,
#Partially deleted in new
chr21	17593652	17612947	chr21:17593652-17612947	3	-	17594092	17609144	789624	5	680,208,138,181,249,	0,4964,11207,15319,19046,
#Partially deleted in new
chr21	17594089	17599091	chr21:17594089-17599091	0	-	17594089	17594089	8553170	2	243,475,	0,4527,
#Partially deleted in new
chr21	17598720	17605133	chr21:17598720-17605133	0	-	17598720	17598720	8553170	2	104,274,	0,6139,
#Partially deleted in new
chr21	17608774	17612851	chr21:17608774-17612851	0	-	17608774	17608774	8553170	2	378,153,	0,3924,
#Partially deleted in new
chr21	17609006	17612945	chr21:17609006-17612945	0	-	17609006	17609144	789624	3	146,118,247,	0,2650,3692,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	17611743	17633199	chr21:17611743-17633199	3	+	17611743	17611743	8553170	3	344,157,51,	0,15149,21405,
#Deleted in new
chr21	17611772	17614113	chr21:17611772-17614113	0	+	17611772	17611772	789624	1	2341,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	17659275	17660384	chr21:17659275-17660384	3	-	17659275	17659275	8553170	2	394,122,	0,987,
#Partially deleted in new
chr21	17763314	17792523	chr21:17763314-17792523	3	-	17763314	17763314	8553170	5	273,101,113,183,47,	0,446,4271,23713,29162,
#Partially deleted in new
chr21	17777403	17792509	chr21:17777403-17792509	0	-	17777403	17777403	789624	3	216,183,33,	0,9624,15073,
#Partially deleted in new
chr21	17788966	17819386	chr21:17788966-17819386	3	-	17793414	17818318	789624	5	4615,63,537,134,84,	0,6241,7615,29225,30336,
#Partially deleted in new
chr21	17792803	17819386	chr21:17792803-17819386	1	-	17793414	17818318	789624	5	775,63,537,134,84,	0,2404,3778,25388,26499,
#Partially deleted in new
chr21	17793246	17819386	chr21:17793246-17819386	1	-	17793579	17818318	789624	4	335,537,134,84,	0,3335,24945,26056,
#Partially deleted in new
chr21	17793487	17810845	chr21:17793487-17810845	3	+	17793487	17793487	8553170	2	71,351,	0,17007,
#Partially deleted in new
chr21	17795207	17819019	chr21:17795207-17819019	0	-	17795207	17818318	789624	4	63,537,134,162,	0,1374,22984,23650,
#Partially deleted in new
chr21	17796722	17819347	chr21:17796722-17819347	0	-	17796722	17796722	8553170	5	396,116,53,134,45,	0,14633,17154,21469,22580,
#Partially deleted in new
chr21	17817720	17819362	chr21:17817720-17819362	0	-	17817720	17817720	8553170	2	605,60,	0,1582,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	17835015	17885608	chr21:17835015-17885608	3	-	17835015	17835015	789624	3	811,159,147,	0,5479,50446,
#Deleted in new
chr21	17894192	17894485	chr21:17894192-17894485	7	-	17894192	17894192	16724991	1	293,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	17917339	18267373	chr21:17917339-18267373	1	+	18256552	18266038	789624	7	61,100,310,158,87,103,1420,	0,110532,339169,339630,342860,345451,348614,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	17917339	18267373	chr21:17917339-18267373	1	+	18256552	18266153	789624	5	61,310,158,87,1420,	0,339169,339630,342860,348614,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	17917339	18267373	chr21:17917339-18267373	1	+	18256552	18266153	789624	6	61,100,310,158,87,1420,	0,110532,339169,339630,342860,348614,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	18022369	18114904	chr21:18022369-18114904	3	-	18022369	18022369	8553170	5	73,71,110,86,138,	0,2310,12150,77563,92397,
#Partially deleted in new
chr21	18244832	18267373	chr21:18244832-18267373	3	+	18245223	18266038	789624	6	470,310,158,87,103,1420,	0,11676,12137,15367,17958,21121,
#Partially deleted in new
chr21	18245874	18266837	chr21:18245874-18266837	1	+	18245947	18266038	789624	6	95,310,158,87,103,884,	0,10634,11095,14325,16916,20079,
#Partially deleted in new
chr21	18256501	18267365	chr21:18256501-18267365	1	+	18256552	18266153	789624	4	317,158,87,1412,	0,468,3698,9452,
#Partially deleted in new
chr21	18269115	18403656	chr21:18269115-18403656	3	-	18269968	18403622	0	25	1009,140,96,182,175,50,96,133,111,141,126,90,136,151,106,150,141,107,109,132,36,152,68,131,179,	0,6081,9848,11924,25154,25487,28618,43829,46030,57316,60053,62968,72297,74390,74839,83787,84607,90641,96024,103077,110167,114511,128763,129083,134362,
#Partially deleted in new
chr21	18477357	18486599	chr21:18477357-18486599	3	-	18477357	18477357	8553170	2	353,108,	0,9134,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	18561264	18760003	chr21:18561264-18760003	3	-	18561264	18561264	789624	4	427,94,102,230,	0,28262,176659,198509,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	18614430	18650360	chr21:18614430-18650360	3	+	18614430	18614430	8553170	3	135,151,593,	0,26258,35337,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	18686089	18686164	chr21:18686089-18686164	3	-	18686089	18686089	5263520	1	75,	0,
#Deleted in new
chr21	18857778	18858276	chr21:18857778-18858276	7	+	18857778	18857778	16724991	1	498,	0,
#Deleted in new
chr21	18917212	18917429	chr21:18917212-18917429	3	+	18917212	18917212	8553170	1	217,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	18917933	18935859	chr21:18917933-18935859	3	-	18917933	18917933	8553170	2	284,500,	0,17426,
#Partially deleted in new
chr21	18953263	18967058	chr21:18953263-18967058	3	-	18953263	18953263	8553170	2	313,111,	0,13684,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	19130522	19134423	chr21:19130522-19134423	3	+	19130522	19130522	8553170	2	169,300,	0,3601,
#Partially deleted in new
chr21	19244542	19246392	chr21:19244542-19246392	7	+	19244542	19244542	16724991	1	1850,	0,
#Deleted in new
chr21	19301612	19303739	chr21:19301612-19303739	3	+	19301612	19301612	8553170	2	265,371,	0,1756,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	19345147	19345312	chr21:19345147-19345312	3	+	19345147	19345147	8553170	1	165,	0,
#Deleted in new
chr21	19593840	19594108	chr21:19593840-19594108	7	+	19593840	19593840	16724991	1	268,	0,
#Deleted in new
chr21	19620694	19621545	chr21:19620694-19621545	7	+	19620694	19620694	16724991	1	851,	0,
#Deleted in new
chr21	19739708	19740150	chr21:19739708-19740150	7	+	19739708	19739708	16724991	1	442,	0,
#Partially deleted in new
chr21	19759358	19760128	chr21:19759358-19760128	7	-	19759358	19759358	16724991	1	770,	0,
#Partially deleted in new
chr21	19893278	19899755	chr21:19893278-19899755	3	-	19893278	19893278	789624	3	295,62,55,	0,4744,6422,
#Deleted in new
chr21	20355747	20355852	chr21:20355747-20355852	3	-	20355747	20355747	8553170	1	105,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	20356652	20356896	chr21:20356652-20356896	3	+	20356652	20356652	8553170	1	244,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	20388333	20388845	chr21:20388333-20388845	7	+	20388333	20388333	16724991	1	512,	0,
#Deleted in new
chr21	20424948	20426206	chr21:20424948-20426206	7	-	20424948	20424948	16724991	1	1258,	0,
#Deleted in new
chr21	20430442	20430762	chr21:20430442-20430762	7	-	20430442	20430442	16724991	1	320,	0,
#Deleted in new
chr21	20597952	20598163	chr21:20597952-20598163	7	+	20597952	20597952	16724991	1	211,	0,
#Deleted in new
chr21	20828126	20828622	chr21:20828126-20828622	7	-	20828126	20828126	16724991	1	496,	0,
#Partially deleted in new
chr21	20998314	21543329	chr21:20998314-21543329	3	+	20998563	21537957	0	18	304,75,207,144,138,118,161,146,151,188,97,174,120,122,181,205,120,5484,	0,282263,285879,287954,293789,326068,337190,340074,375548,411959,420158,433793,468291,470347,478976,510536,536222,539531,
#Partially deleted in new
chr21	21223294	21226829	chr21:21223294-21226829	3	-	21223294	21223294	8553170	2	453,182,	0,3353,
#Partially deleted in new
chr21	21239341	21292190	chr21:21239341-21292190	0	+	21239341	21239341	8553170	5	70,75,207,144,87,	0,41236,44852,46927,52762,
#Partially deleted in new
chr21	21280575	21540195	chr21:21280575-21540195	1	+	21280576	21537957	789624	17	77,207,144,138,118,161,146,151,188,97,174,120,122,181,205,120,2350,	0,3618,5693,11528,43807,54929,57813,93287,129698,137897,151532,186030,188086,196715,228275,253961,257270,
#Partially deleted in new
chr21	21290076	21338478	chr21:21290076-21338478	0	+	21290076	21290076	8553170	5	75,138,118,161,90,	0,2027,34306,45428,48312,
#Partially deleted in new
chr21	21463740	21468783	chr21:21463740-21468783	0	+	21463740	21463740	8553170	3	98,120,122,	0,2865,4921,
#Partially deleted in new
chr21	21566762	21615437	chr21:21566762-21615437	3	+	21566762	21566762	8553170	2	201,408,	0,48267,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	21746984	21797415	chr21:21746984-21797415	3	+	21746984	21746984	789624	5	59,290,81,93,237,	0,1410,37988,39314,50194,
#Partially deleted in new
chr21	22041173	22054369	chr21:22041173-22054369	1	-	22041173	22041173	8553170	3	262,143,60,	0,1771,13136,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	22134697	22136083	chr21:22134697-22136083	7	-	22134697	22134697	16724991	1	1386,	0,
#Deleted in new
chr21	22153949	22154299	chr21:22153949-22154299	7	-	22153949	22153949	16724991	1	350,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	22205191	22205332	chr21:22205191-22205332	3	+	22205191	22205191	8553170	1	141,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	22209938	22420819	chr21:22209938-22420819	3	+	22209938	22209938	8553170	3	306,79,50,	0,2796,210831,
#Deleted in new
chr21	22436289	22438349	chr21:22436289-22438349	7	-	22436289	22436289	16724991	1	2060,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	22500603	22520058	chr21:22500603-22520058	3	-	22500603	22500603	8553170	3	707,79,191,	0,18140,19264,
#Partially deleted in new
chr21	22882581	22884000	chr21:22882581-22884000	7	+	22882581	22882581	16724991	3	307,215,107,	0,621,1312,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	23065490	23131206	chr21:23065490-23131206	3	+	23065490	23065490	8553170	5	179,118,183,98,184,	0,2428,43329,63150,65532,
#Partially deleted in new
chr21	23090027	23091831	chr21:23090027-23091831	7	-	23090027	23090027	16724991	1	1804,	0,
#Partially deleted in new
chr21	23101222	23103074	chr21:23101222-23103074	7	+	23101222	23101222	16724991	3	224,254,890,	0,362,962,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	23281735	23281909	chr21:23281735-23281909	3	-	23281735	23281735	8553170	1	174,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	23361103	23384861	chr21:23361103-23384861	3	-	23361103	23361103	789624	5	1136,156,122,137,174,	0,2934,11223,11844,23584,
#Deleted in new
chr21	23390257	23390996	chr21:23390257-23390996	7	+	23390257	23390257	16724991	1	739,	0,
#Partially deleted in new
chr21	23407657	23409128	chr21:23407657-23409128	7	-	23407657	23407657	16724991	2	706,646,	0,825,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	23432180	23432282	chr21:23432180-23432282	3	-	23432180	23432180	8553170	1	102,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	23477640	23490724	chr21:23477640-23490724	3	+	23477640	23477640	8553170	2	131,730,	0,12354,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	23888797	23890541	chr21:23888797-23890541	3	-	23888797	23888797	8553170	3	328,217,135,	0,712,1609,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	24043256	24043626	chr21:24043256-24043626	0	+	24043256	24043256	8553170	2	80,137,	0,233,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	24043256	24050286	chr21:24043256-24050286	3	+	24043256	24043256	8553170	2	80,767,	0,6263,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	24155169	24188342	chr21:24155169-24188342	3	-	24155169	24155169	8553170	3	560,90,43,	0,32101,33130,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	24304545	24309894	chr21:24304545-24309894	1	-	24304545	24304545	8553170	5	753,68,141,118,60,	0,1556,3073,3670,5289,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	24304549	24321377	chr21:24304549-24321377	3	-	24304549	24304549	789624	4	1620,141,118,128,	0,3069,3666,16700,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	24428739	24490307	chr21:24428739-24490307	1	+	24428739	24428739	789624	6	165,181,185,119,63,2195,	0,9513,12429,13055,56883,59373,
#Partially deleted in new
chr21	24428757	24441324	chr21:24428757-24441324	0	+	24428757	24428757	8553170	3	147,191,156,	0,9495,12411,
#Partially deleted in new
chr21	24428780	24547942	chr21:24428780-24547942	3	+	24428780	24428780	789624	3	124,104,1948,	0,101883,117214,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	24840549	25057746	chr21:24840549-25057746	3	+	24840549	24840549	789624	4	179,151,76,2313,	0,4229,189234,214884,
#Partially deleted in new
chr21	24886675	24902756	chr21:24886675-24902756	3	-	24886675	24886675	8553170	2	461,79,	0,16002,
#Partially deleted in new
chr21	24938430	24952157	chr21:24938430-24952157	1	-	24938430	24938430	8553170	2	194,247,	0,13480,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	24938430	24992817	chr21:24938430-24992817	3	-	24938430	24938430	8553170	2	194,115,	0,54272,
#Deleted in new
chr21	25031004	25031529	chr21:25031004-25031529	7	-	25031004	25031004	16724991	1	525,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	25055534	25069906	chr21:25055534-25069906	3	+	25055534	25055534	8553170	4	50,86,152,191,	0,6091,13192,14181,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	25095021	25103670	chr21:25095021-25103670	0	+	25095021	25095021	8553170	3	132,62,383,	0,6237,8266,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	25095041	25103670	chr21:25095041-25103670	3	+	25095041	25095041	8553170	3	112,189,383,	0,6090,8246,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	25101131	25101415	chr21:25101131-25101415	3	+	25101131	25101131	8553170	1	284,	0,
#Partially deleted in new
chr21	25127468	25135247	chr21:25127468-25135247	3	+	25127468	25127468	8553170	4	49,108,94,40,	0,6175,7489,7739,
#Partially deleted in new
chr21	25169430	25333825	chr21:25169430-25333825	3	-	25169430	25169430	8553170	4	319,150,205,89,	0,1326,5810,164306,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	25202206	25202315	chr21:25202206-25202315	7	+	25202206	25202206	16724991	1	109,	0,
#Deleted in new
chr21	25361820	25362431	chr21:25361820-25362431	7	+	25361820	25361820	16724991	1	611,	0,
#Deleted in new
chr21	25371826	25372043	chr21:25371826-25372043	3	+	25371826	25371826	8553170	1	217,	0,
#Partially deleted in new
chr21	25385819	25431701	chr21:25385819-25431701	3	-	25385819	25385819	789624	5	519,93,96,244,524,	0,34888,38734,43946,45358,
#Partially deleted in new
chr21	25385819	25431701	chr21:25385819-25431701	0	-	25385819	25385819	8553170	4	519,93,244,524,	0,34888,43946,45358,
#Partially deleted in new
chr21	25396193	25424709	chr21:25396193-25424709	1	-	25396193	25396193	8553170	3	491,93,156,	0,24514,28360,
#Partially deleted in new
chr21	25396486	25430009	chr21:25396486-25430009	0	-	25396486	25396486	8553170	4	198,93,96,244,	0,24221,28067,33279,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	25515472	25518338	chr21:25515472-25518338	3	-	25515472	25515472	8553170	2	983,63,	0,2803,
#Partially deleted in new
chr21	25561908	25575168	chr21:25561908-25575168	3	+	25561908	25561908	789624	4	106,133,85,1276,	0,216,7928,11984,
#Deleted in new
chr21	25573979	25574044	chr21:25573979-25574044	3	+	25573979	25573979	789624	1	65,	0,
#Deleted in new
chr21	25582769	25583326	chr21:25582769-25583326	3	-	25582769	25582769	789624	1	557,	0,
#Partially deleted in new
chr21	25585655	25607517	chr21:25585655-25607517	1	-	25585750	25607475	0	11	99,89,48,154,66,113,68,100,140,207,115,	0,2045,3179,7156,8237,11646,14143,15712,18140,20793,21747,
#Partially deleted in new
chr21	25585655	25607517	chr21:25585655-25607517	3	-	25585706	25607475	0	10	99,48,154,66,113,68,100,140,207,115,	0,3179,7156,8237,11646,14143,15712,18140,20793,21747,
#Partially deleted in new
chr21	25592811	25607484	chr21:25592811-25607484	0	-	25592811	25607475	789624	8	154,66,113,38,100,140,207,82,	0,1081,4490,6987,8556,10984,13637,14591,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr21	25639271	25714573	chr21:25639271-25714573	1	+	25639821	25714305	789624	10	617,66,108,153,203,100,108,16,43,343,	0,44611,50594,54484,59405,62898,66707,70162,73068,74959,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr21	25639271	25717562	chr21:25639271-25717562	3	+	25639821	25714672	789624	10	617,66,108,153,203,100,108,16,43,2923,	0,44611,50594,54484,59405,62898,66707,70162,73068,75368,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr21	25639281	25717552	chr21:25639281-25717552	1	+	25639821	25714672	789624	9	607,66,153,203,100,108,16,43,2913,	0,44601,54474,59395,62888,66697,70152,73058,75358,
#Deleted in new
chr21	25643488	25644216	chr21:25643488-25644216	7	+	25643488	25643488	16724991	1	728,	0,
#Partially deleted in new
chr21	25689865	25714731	chr21:25689865-25714731	0	+	25689865	25711463	789624	9	108,153,203,100,108,16,202,43,92,	0,3890,8811,12304,16113,19568,21501,22474,24774,
#Deleted in new
chr21	25692179	25692554	chr21:25692179-25692554	7	+	25692179	25692179	16724991	1	375,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	25702177	25710179	chr21:25702177-25710179	0	+	25702177	25702177	8553170	3	92,108,746,	0,3801,7256,
#Partially deleted in new
chr21	25711387	25714739	chr21:25711387-25714739	0	+	25711387	25711387	8553170	3	168,43,100,	0,952,3252,
#Partially deleted in new
chr21	25712018	25714889	chr21:25712018-25714889	0	+	25712018	25712018	8553170	2	364,250,	0,2621,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	25716502	25735027	chr21:25716502-25735027	1	-	25717688	25729794	789624	5	58,99,125,171,39,	0,1158,8723,13128,18486,
#Partially deleted in new
chr21	25724479	25734972	chr21:25724479-25734972	1	-	25724639	25729794	789624	4	198,125,171,120,	0,746,5151,10373,
#Partially deleted in new
chr21	25724479	25735646	chr21:25724479-25735646	1	-	25724639	25729794	789624	4	198,125,171,332,	0,746,5151,10835,
#Partially deleted in new
chr21	25724479	25735639	chr21:25724479-25735639	1	-	25724639	25729794	789624	4	198,125,171,153,	0,746,5151,11007,
#Partially deleted in new
chr21	25724479	25735673	chr21:25724479-25735673	3	-	25724639	25729794	789624	4	198,125,171,685,	0,746,5151,10509,
#Partially deleted in new
chr21	25724479	25734904	chr21:25724479-25734904	1	-	25724639	25729794	789624	5	198,125,171,43,52,	0,746,5151,9853,10373,
#Partially deleted in new
chr21	25724479	25735033	chr21:25724479-25735033	1	-	25724639	25734955	789624	4	198,125,171,95,	0,746,5151,10459,
#Partially deleted in new
chr21	25724697	25734904	chr21:25724697-25734904	0	-	25724697	25724697	8553170	3	653,171,52,	0,4933,10155,
#Partially deleted in new
chr21	25734569	25772460	chr21:25734569-25772460	3	+	25741598	25769232	789624	10	501,103,145,85,246,195,54,141,193,3457,	0,7003,10640,14466,17419,23440,27742,29640,30025,34434,
#Partially deleted in new
chr21	25735383	25772460	chr21:25735383-25772460	1	+	25741598	25769232	789624	10	195,103,145,85,246,195,54,141,193,3457,	0,6189,9826,13652,16605,22626,26928,28826,29211,33620,
#Partially deleted in new
chr21	25735388	25752348	chr21:25735388-25752348	0	+	25735388	25735388	8553170	4	190,145,85,360,	0,9821,13647,16600,
#Deleted in new
chr21	25762937	25763333	chr21:25762937-25763333	7	-	25762937	25762937	16724991	1	396,	0,
#Partially deleted in new
chr21	25880549	26170654	chr21:25880549-26170654	3	-	25881669	26170620	0	18	1222,147,101,54,222,100,129,159,75,134,57,168,203,194,113,130,168,91,	0,11172,17023,24474,31191,74040,75077,94520,95404,101794,116810,119465,141290,170450,172686,209393,231429,290014,
#Partially deleted in new
chr21	25880549	26170767	chr21:25880549-26170767	1	-	25881669	26170620	0	16	1222,147,101,54,222,100,129,159,75,134,203,194,113,130,168,204,	0,11172,17023,24474,31191,74040,75077,94520,95404,101794,141290,170450,172686,209393,231429,290014,
#Partially deleted in new
chr21	25880549	26170747	chr21:25880549-26170747	1	-	25881669	26170620	0	15	1222,147,101,54,222,100,129,159,75,134,203,194,113,130,184,	0,11172,17023,24474,31191,74040,75077,94520,95404,101794,141290,170450,172686,209393,290014,
#Partially deleted in new
chr21	25880549	26170787	chr21:25880549-26170787	1	-	25881669	26170620	0	17	1222,147,101,54,222,100,129,159,75,134,168,203,194,113,130,168,224,	0,11172,17023,24474,31191,74040,75077,94520,95404,101794,119465,141290,170450,172686,209393,231429,290014,
#Partially deleted in new
chr21	25880550	26171128	chr21:25880550-26171128	1	-	25881669	26112098	789624	16	1221,147,101,54,222,100,129,159,75,134,203,194,113,130,168,144,	0,11171,17022,24473,31190,74039,75076,94519,95403,101793,141289,170449,172685,209392,231428,290434,
#Partially deleted in new
chr21	25881330	26140460	chr21:25881330-26140460	1	-	25881669	26140194	0	17	441,147,101,54,222,100,129,159,75,134,168,203,194,113,130,168,308,	0,10391,16242,23693,30410,73259,74296,93739,94623,101013,118684,140509,169669,171905,208612,230648,258822,
#Partially deleted in new
chr21	25881331	26170654	chr21:25881331-26170654	1	-	25881669	26170620	789624	17	440,147,101,54,222,100,129,159,75,134,57,168,203,194,113,130,91,	0,10390,16241,23692,30409,73258,74295,93738,94622,101012,116028,118683,140508,169668,171904,208611,289232,
#Partially deleted in new
chr21	25881513	25897983	chr21:25881513-25897983	0	-	25881513	25881513	8553170	3	258,147,411,	0,10208,16059,
#Partially deleted in new
chr21	25881609	26170667	chr21:25881609-26170667	1	-	25881669	26170620	0	17	162,147,101,222,100,129,159,75,134,57,168,203,194,113,130,168,104,	0,10112,15963,30131,72980,74017,93460,94344,100734,115750,118405,140230,169390,171626,208333,230369,288954,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	25928753	25935126	chr21:25928753-25935126	1	+	25928753	25928753	8553170	2	244,415,	0,5958,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	25933815	25935270	chr21:25933815-25935270	0	+	25933815	25933815	8553170	2	551,361,	0,1094,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	25934086	25941641	chr21:25934086-25941641	1	+	25934086	25934086	8553170	4	280,139,123,334,	0,823,3703,7221,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	25934088	25935178	chr21:25934088-25935178	0	+	25934088	25934088	8553170	2	101,269,	0,821,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	25934305	25941803	chr21:25934305-25941803	0	+	25934305	25934305	8553170	2	61,496,	0,7002,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	25934311	25942686	chr21:25934311-25942686	3	+	25934311	25934311	8553170	3	55,139,1379,	0,598,6996,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	25934340	25935178	chr21:25934340-25935178	0	+	25934340	25934340	8553170	1	838,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	25943043	25943145	chr21:25943043-25943145	3	-	25943043	25943043	8553170	1	102,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr21	25945523	26090061	chr21:25945523-26090061	0	-	25945913	26090061	789624	11	452,100,129,159,75,134,168,203,194,113,119,	0,9066,10103,29546,30430,36820,54491,76316,105476,107712,144419,
#Partially deleted in new
chr21	25975189	26051032	chr21:25975189-26051032	0	-	25975189	26051032	789624	6	39,75,134,57,203,33,	0,764,7154,22170,46650,75810,
#Partially deleted in new
chr21	25997187	26051018	chr21:25997187-26051018	0	-	25997187	25997187	8553170	4	229,168,203,19,	0,2827,24652,53812,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	26009595	26170746	chr21:26009595-26170746	0	-	26009595	26009595	8553170	7	318,203,194,113,130,168,183,	0,12244,41404,43640,80347,102383,160968,
#Partially deleted in new
chr21	26021921	26053502	chr21:26021921-26053502	0	-	26021921	26021921	8553170	3	121,194,267,	0,29078,31314,
#Partially deleted in new
chr21	26051159	26068338	chr21:26051159-26068338	0	-	26051159	26051159	8553170	3	34,113,214,	0,2076,16965,
#Partially deleted in new
chr21	26089510	26112083	chr21:26089510-26112083	0	-	26089510	26089510	8553170	2	562,105,	0,22468,
#Partially deleted in new
chr21	26111984	26169429	chr21:26111984-26169429	0	-	26111984	26111984	8553170	2	162,212,	0,57233,
#Partially deleted in new
chr21	26158090	26175824	chr21:26158090-26175824	3	+	26158090	26158090	8553170	2	177,215,	0,17519,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	26170870	26217381	chr21:26170870-26217381	3	+	26170870	26170870	8553170	3	182,117,1680,	0,43874,44831,
#Partially deleted in new
chr21	26190706	26190813	chr21:26190706-26190813	3	+	26190706	26190706	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	26349779	26350634	chr21:26349779-26350634	3	-	26349779	26349779	8553170	2	148,368,	0,487,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	26378551	26471102	chr21:26378551-26471102	3	+	26378551	26378551	8553170	6	153,72,58,59,87,352,	0,3973,8449,9172,92008,92199,
#Partially deleted in new
chr21	26387725	26418087	chr21:26387725-26418087	1	+	26387725	26387725	8553170	4	57,215,227,145,	0,25326,28984,30217,
#Partially deleted in new
chr21	26390135	26471698	chr21:26390135-26471698	1	+	26390135	26390135	8553170	2	130,948,	0,80615,
#Partially deleted in new
chr21	26416508	26471198	chr21:26416508-26471198	0	+	26416508	26416508	8553170	2	153,448,	0,54242,
#Partially deleted in new
chr21	26459902	26460214	chr21:26459902-26460214	3	-	26459902	26459902	8553170	1	312,	0,
#Partially deleted in new
chr21	26466208	26573284	chr21:26466208-26573284	3	-	26468500	26572940	789624	4	2423,158,103,417,	0,14063,100057,106659,
#Partially deleted in new
chr21	26477970	26573176	chr21:26477970-26573176	1	-	26478070	26572940	789624	4	165,158,103,309,	0,2301,88295,94897,
#Partially deleted in new
chr21	26835746	26845409	chr21:26835746-26845409	3	-	26837578	26844954	0	9	2532,176,176,187,287,168,133,347,1185,	0,2692,3840,4128,4529,5251,6111,6592,8478,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	26836286	26841711	chr21:26836286-26841711	0	-	26836286	26836286	8553170	4	1992,1324,688,714,	0,2152,3588,4711,
#Deleted in new
chr21	26838092	26840489	chr21:26838092-26840489	0	-	26838092	26838092	8553170	4	186,176,176,615,	0,346,1494,1782,
#Partially deleted in new
chr21	26841076	26843018	chr21:26841076-26843018	0	-	26841076	26842629	789624	4	89,133,347,29,	0,781,1262,1913,
#Partially deleted in new
chr21	26841119	26843540	chr21:26841119-26843540	0	-	26841119	26843540	789624	4	46,133,347,75,	0,738,1219,2346,
#Deleted in new
chr21	26841968	26843777	chr21:26841968-26843777	0	-	26841968	26843757	789624	3	22,347,36,	0,370,1773,
#Partially deleted in new
chr21	26889375	26939742	chr21:26889375-26939742	3	+	26889375	26889375	8553170	3	69,165,127,	0,20490,50240,
#Partially deleted in new
chr21	26917911	26966513	chr21:26917911-26966513	3	-	26924052	26966391	0	8	6709,176,176,184,284,168,133,1226,	0,11974,14092,14949,16554,25468,36827,47376,
#Deleted in new
chr21	26953960	26954043	chr21:26953960-26954043	3	+	26953960	26953960	5263520	1	83,	0,
#Deleted in new
chr21	27143343	27143949	chr21:27143343-27143949	7	-	27143343	27143343	16724991	1	606,	0,
#Partially deleted in new
chr21	27358884	27448579	chr21:27358884-27448579	3	-	27358884	27358884	8553170	4	2272,86,43,202,	0,39595,40647,89493,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	27361163	27395787	chr21:27361163-27395787	3	+	27361163	27361163	8553170	5	290,101,194,162,207,	0,1549,26303,30226,34417,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	27367013	27367947	chr21:27367013-27367947	7	-	27367013	27367013	16724991	1	934,	0,
#Deleted in new
chr21	27420379	27421023	chr21:27420379-27421023	7	-	27420379	27420379	16724991	1	644,	0,
#Deleted in new
chr21	27492117	27492261	chr21:27492117-27492261	7	+	27492117	27492117	16724991	1	144,	0,
#Partially deleted in new
chr21	27638692	27653491	chr21:27638692-27653491	3	+	27638692	27638692	8553170	3	231,101,136,	0,9972,14663,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	27722397	27751233	chr21:27722397-27751233	0	+	27722397	27722397	8553170	4	16,112,219,162,	0,20995,23420,28674,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	27954921	27985295	chr21:27954921-27985295	3	+	27954921	27954921	8553170	3	102,214,256,	0,22987,30118,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	28013362	28023233	chr21:28013362-28023233	3	+	28013362	28013362	789624	2	70,537,	0,9334,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	28048403	28137611	chr21:28048403-28137611	3	+	28048403	28048403	789624	5	134,220,93,395,922,	0,54146,82126,86910,88286,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	28048446	28103580	chr21:28048446-28103580	1	+	28048446	28048446	8553170	2	91,1031,	0,54103,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	28116093	28228667	chr21:28116093-28228667	3	-	28116093	28116093	789624	6	3781,116,66,109,108,306,	0,47508,53984,96146,109790,112268,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	28130118	28135572	chr21:28130118-28135572	0	+	28130118	28130118	8553170	2	504,259,	0,5195,
#Duplicated in new
chr21	28163601	28170143	chr21:28163601-28170143	0	-	28163601	28163601	8553170	3	116,94,66,	0,3624,6476,
#Partially deleted in new
chr21	28212305	28228480	chr21:28212305-28228480	0	-	28212305	28212305	8553170	4	46,170,108,119,	0,4872,13578,16056,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	28439345	28674848	chr21:28439345-28674848	3	-	28439345	28439345	8553170	5	5464,183,162,92,202,	0,6944,137873,187239,235301,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	28539317	28540355	chr21:28539317-28540355	3	+	28539317	28539317	789624	2	567,303,	0,735,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	28539317	28540355	chr21:28539317-28540355	0	+	28539317	28539317	789624	2	211,303,	0,735,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	28670980	28674773	chr21:28670980-28674773	0	-	28670980	28670980	8553170	2	316,127,	0,3666,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	28743207	28743291	chr21:28743207-28743291	3	+	28743207	28743207	8553170	1	84,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	28872190	28885371	chr21:28872190-28885371	3	-	28876384	28885345	789624	6	4301,142,84,91,87,160,	0,6001,7679,9969,10794,13021,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	28872190	28885371	chr21:28872190-28885371	1	-	28876384	28885345	789624	5	4301,142,91,87,160,	0,6001,9969,10794,13021,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	28872190	28885371	chr21:28872190-28885371	0	-	28876384	28885345	789624	7	549,180,142,84,91,87,160,	0,4121,6001,7679,9969,10794,13021,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	28887279	28889272	chr21:28887279-28889272	7	-	28887279	28887279	16724991	2	1054,632,	0,1361,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	28901778	28903697	chr21:28901778-28903697	7	-	28901778	28901778	16724991	3	275,151,615,	0,593,1304,
#Partially deleted in new
chr21	28928143	28992885	chr21:28928143-28992885	1	-	28930447	28992805	0	30	2367,168,195,221,172,187,75,238,214,145,136,143,105,160,187,145,154,240,190,42,810,136,191,174,181,53,231,99,204,122,	0,3011,4326,6965,8382,13076,15118,15523,16239,17663,18008,19320,24016,25073,28618,29188,30242,31314,32373,37721,38226,41322,42408,43127,52975,54172,56548,57995,58587,64620,
#Partially deleted in new
chr21	28928143	28992949	chr21:28928143-28992949	1	-	28930447	28992943	0	30	2367,168,195,221,172,187,75,238,214,145,136,143,105,160,187,145,154,240,190,42,810,136,191,174,181,53,231,99,204,186,	0,3011,4326,6965,8382,13076,15118,15523,16239,17663,18008,19320,24016,25073,28618,29188,30242,31314,32373,37721,38226,41322,42408,43127,52975,54172,56548,57995,58587,64620,
#Partially deleted in new
chr21	28928143	28992956	chr21:28928143-28992956	3	-	28930447	28992943	0	30	2367,168,195,221,172,187,75,238,214,145,136,143,105,160,187,145,154,240,190,42,810,136,191,174,181,53,231,99,204,193,	0,3011,4326,6965,8382,13076,15118,15523,16239,17663,18008,19320,24016,25073,28618,29188,30242,31314,32373,37721,38226,41322,42408,43127,52975,54172,56548,57995,58587,64620,
#Deleted in new
chr21	28958405	28959862	chr21:28958405-28959862	0	-	28958405	28958405	8553170	2	134,405,	0,1052,
#Partially deleted in new
chr21	28958449	28960821	chr21:28958449-28960821	0	-	28958449	28958449	8553170	3	90,301,305,	0,947,2067,
#Partially deleted in new
chr21	28961316	28992949	chr21:28961316-28992949	1	-	28964625	28992943	789624	13	217,190,42,810,136,191,174,181,53,231,99,204,186,	0,3260,4548,5053,8149,9235,9954,19802,20999,23375,24822,25414,31447,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr21	28966894	28986761	chr21:28966894-28986761	0	-	28967970	28986761	789624	10	285,372,136,191,174,181,53,231,99,31,	0,707,2571,3657,4376,14224,15421,17797,19244,19836,
#Deleted in new
chr21	28997612	28998033	chr21:28997612-28998033	7	-	28997612	28997612	16724991	1	421,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	29004383	29019378	chr21:29004383-29019378	3	-	29006416	29019277	0	5	2268,363,68,227,168,	0,3377,3856,4011,14827,
#Partially deleted in new
chr21	29005758	29019352	chr21:29005758-29019352	0	-	29005758	29005758	8553170	4	893,363,227,142,	0,2002,2636,13452,
#Partially deleted in new
chr21	29005758	29019359	chr21:29005758-29019359	0	-	29005758	29005758	8553170	4	893,363,382,149,	0,2002,2481,13452,
#Partially deleted in new
chr21	29007875	29019306	chr21:29007875-29019306	0	-	29007875	29007875	8553170	2	746,96,	0,11335,
#Deleted in new
chr21	29024254	29024890	chr21:29024254-29024890	3	-	29024254	29024254	8553170	1	636,	0,
#Partially deleted in new
chr21	29024628	29054488	chr21:29024628-29054488	1	+	29027913	29054187	0	18	149,102,179,104,104,185,96,131,88,79,92,57,177,655,95,87,157,423,	0,3244,5966,10208,11642,12650,13706,14397,14852,15980,17384,17843,18794,22038,24132,25463,29173,29437,
#Partially deleted in new
chr21	29024628	29054488	chr21:29024628-29054488	3	+	29027913	29054187	0	18	149,102,179,104,104,188,96,131,88,79,92,57,177,655,95,87,157,423,	0,3244,5966,10208,11642,12647,13706,14397,14852,15980,17384,17843,18794,22038,24132,25463,29173,29437,
#Partially deleted in new
chr21	29024650	29054488	chr21:29024650-29054488	1	+	29027913	29054187	0	19	127,63,102,179,104,104,188,96,131,88,79,92,57,177,655,95,87,157,423,	0,1058,3222,5944,10186,11620,12625,13684,14375,14830,15958,17362,17821,18772,22016,24110,25441,29151,29415,
#Partially deleted in new
chr21	29024650	29054488	chr21:29024650-29054488	0	+	29024650	29024650	8553170	17	127,102,179,104,104,188,96,131,88,79,92,1128,655,95,87,157,423,	0,3222,5944,10186,11620,12625,13684,14375,14830,15958,17362,17821,22016,24110,25441,29151,29415,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	29024655	29034919	chr21:29024655-29034919	0	+	29027913	29034919	789624	5	122,95,102,179,83,	0,1911,3217,5939,10181,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	29052122	29054488	chr21:29052122-29054488	0	+	29052122	29052122	8553170	2	1836,423,	0,1943,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	29055804	29061376	chr21:29055804-29061376	0	-	29056474	29061376	789624	4	215,97,120,124,	0,651,4736,5448,
#Partially deleted in new
chr21	29056321	29073797	chr21:29056321-29073797	1	-	29056474	29070258	789624	14	231,120,165,72,116,88,67,179,138,62,181,150,91,267,	0,4219,4931,5174,5806,6006,6168,7030,8646,10394,10569,11234,13925,17209,
#Partially deleted in new
chr21	29056323	29073797	chr21:29056323-29073797	3	-	29056474	29073590	789624	15	229,120,165,72,116,88,67,179,138,62,181,150,80,91,267,	0,4217,4929,5172,5804,6004,6166,7028,8644,10392,10567,11232,13099,13923,17207,
#Partially deleted in new
chr21	29056323	29073639	chr21:29056323-29073639	0	-	29056323	29056323	8553170	15	229,120,165,72,116,88,67,179,138,62,181,150,80,91,134,	0,4217,4929,5172,5804,6004,6166,7028,8644,10392,10567,11232,13099,13923,17182,
#Partially deleted in new
chr21	29056323	29062867	chr21:29056323-29062867	0	-	29056323	29056323	8553170	5	229,120,165,72,740,	0,4217,4929,5172,5804,
#Partially deleted in new
chr21	29056328	29073351	chr21:29056328-29073351	1	-	29056474	29071954	789624	16	224,120,165,72,116,88,67,179,138,62,181,150,80,91,37,92,	0,4212,4924,5167,5799,5999,6161,7023,8639,10387,10562,11227,13094,13918,15623,16931,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	29058072	29060095	chr21:29058072-29060095	3	-	29058072	29058072	8553170	2	120,674,	0,1349,
#Deleted in new
chr21	29062127	29062737	chr21:29062127-29062737	0	-	29062127	29062127	8553170	3	116,88,248,	0,200,362,
#Deleted in new
chr21	29062168	29063468	chr21:29062168-29063468	0	-	29062168	29062168	8553170	3	247,67,117,	0,321,1183,
#Partially deleted in new
chr21	29062208	29073565	chr21:29062208-29073565	0	-	29062208	29073565	789624	10	35,88,67,179,62,181,150,80,91,35,	0,119,281,1143,4507,4682,5347,7214,8038,11322,
#Partially deleted in new
chr21	29065059	29073615	chr21:29065059-29073615	0	-	29065059	29065059	8553170	6	46,356,150,80,91,85,	0,1656,2496,4363,5187,8471,
#Partially deleted in new
chr21	29065075	29072236	chr21:29065075-29072236	0	-	29065075	29065075	8553170	7	30,62,181,150,80,91,285,	0,1640,1815,2480,4347,5171,6876,
#Partially deleted in new
chr21	29067589	29073432	chr21:29067589-29073432	0	-	29067589	29067589	8553170	4	116,80,91,227,	0,1833,2657,5616,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	29077470	29109791	chr21:29077470-29109791	0	+	29077470	29077470	8553170	7	243,157,105,76,94,143,752,	0,3081,8342,14030,14197,14968,31569,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	29077474	29091576	chr21:29077474-29091576	0	+	29085860	29091576	789624	4	239,157,105,76,	0,3077,8338,14026,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	29077495	29102640	chr21:29077495-29102640	0	+	29077495	29077495	8553170	6	218,105,76,94,143,133,	0,8317,14005,14172,14943,25012,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr21	29077632	29175889	chr21:29077632-29175889	1	+	29085860	29174892	789624	8	81,105,76,94,143,62,116,1178,	0,8180,13868,14035,14806,71556,82308,97079,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr21	29077632	29175889	chr21:29077632-29175889	1	+	29133344	29174892	789624	9	81,105,76,94,143,109,62,116,1178,	0,8180,13868,14035,14806,55673,71556,82308,97079,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr21	29077632	29175889	chr21:29077632-29175889	3	+	29133344	29174892	789624	10	81,105,76,94,143,129,109,62,116,1178,	0,8180,13868,14035,14806,53162,55673,71556,82308,97079,
#Partially deleted in new
chr21	29080551	29175889	chr21:29080551-29175889	1	+	29085860	29174892	789624	9	157,72,105,76,94,143,62,116,1178,	0,4520,5261,10949,11116,11887,68637,79389,94160,
#Partially deleted in new
chr21	29085860	29175888	chr21:29085860-29175888	1	+	29085860	29174892	789624	7	57,76,94,143,62,116,1177,	0,5640,5807,6578,63328,74080,88851,
#Partially deleted in new
chr21	29092253	29175889	chr21:29092253-29175889	1	+	29133344	29174892	789624	7	328,144,129,109,62,116,1178,	0,16786,38541,41052,56935,67687,82458,
#Partially deleted in new
chr21	29109131	29175888	chr21:29109131-29175888	1	+	29109131	29174892	789624	4	52,62,116,1177,	0,40057,50809,65580,
#Partially deleted in new
chr21	29122054	29175029	chr21:29122054-29175029	0	+	29122054	29122054	8553170	4	159,62,116,318,	0,27134,37886,52657,
#Deleted in new
chr21	29127700	29128188	chr21:29127700-29128188	7	-	29127700	29127700	16724991	1	488,	0,
#Partially deleted in new
chr21	29130484	29175889	chr21:29130484-29175889	1	+	29133344	29174892	789624	5	439,109,62,116,1178,	0,2821,18704,29456,44227,
#Partially deleted in new
chr21	29130637	29175014	chr21:29130637-29175014	1	+	29133344	29174892	789624	6	30,129,109,62,116,303,	0,157,2668,18551,29303,44074,
#Partially deleted in new
chr21	29130960	29175026	chr21:29130960-29175026	1	+	29133344	29174892	789624	5	90,109,62,116,315,	0,2345,18228,28980,43751,
#Partially deleted in new
chr21	29131256	29174745	chr21:29131256-29174745	0	+	29133344	29174745	789624	5	235,109,62,116,34,	0,2049,17932,28684,43455,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	29139282	29139384	chr21:29139282-29139384	3	-	29139282	29139282	8553170	1	102,	0,
#Partially deleted in new
chr21	29145558	29175219	chr21:29145558-29175219	0	+	29145558	29145558	8553170	4	149,62,116,508,	0,3630,14382,29153,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	29180424	29180639	chr21:29180424-29180639	3	-	29180424	29180424	8553170	1	215,	0,
#Partially deleted in new
chr21	29182026	29187795	chr21:29182026-29187795	3	-	29182026	29182026	8553170	2	204,123,	0,5646,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	29193479	29288205	chr21:29193479-29288205	3	+	29193479	29193479	8553170	3	231,330,222,	0,451,94504,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	29193493	29288205	chr21:29193493-29288205	1	+	29193493	29193493	5263520	2	767,222,	0,94490,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	29194036	29284207	chr21:29194036-29284207	1	+	29194036	29194036	8553170	3	224,66,18,	0,34924,90153,
#Partially deleted in new
chr21	29194070	29321355	chr21:29194070-29321355	0	+	29321280	29321355	789624	2	190,135,	0,127150,
#Partially deleted in new
chr21	29194146	29321355	chr21:29194146-29321355	0	+	29321280	29321355	789624	4	114,112,124,135,	0,93837,111052,127074,
#Partially deleted in new
chr21	29194146	29321355	chr21:29194146-29321355	0	+	29321280	29321355	789624	3	114,66,135,	0,24714,127074,
#Deleted in new
chr21	29222320	29223257	chr21:29222320-29223257	7	+	29222320	29222320	16724991	1	937,	0,
#Partially deleted in new
chr21	29298870	29346148	chr21:29298870-29346148	1	+	29321280	29342833	0	5	83,294,1335,207,3750,	0,22350,27188,30616,43528,
#Partially deleted in new
chr21	29299415	29346148	chr21:29299415-29346148	1	+	29321280	29342833	0	5	183,294,1335,207,3750,	0,21805,26643,30071,42983,
#Partially deleted in new
chr21	29299682	29321355	chr21:29299682-29321355	0	+	29321280	29321355	789624	2	82,135,	0,21538,
#Partially deleted in new
chr21	29300132	29326498	chr21:29300132-29326498	0	+	29321280	29326498	789624	3	43,294,440,	0,21088,25926,
#Partially deleted in new
chr21	29300801	29326484	chr21:29300801-29326484	0	+	29321280	29326484	789624	3	31,294,426,	0,20419,25257,
#Partially deleted in new
chr21	29305202	29326336	chr21:29305202-29326336	0	+	29321280	29326336	789624	3	120,294,278,	0,16018,20856,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	29327128	29630751	chr21:29327128-29630751	0	+	29327128	29630556	789624	5	265,207,40,125,213,	0,2358,255183,270441,303410,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	29327275	29630751	chr21:29327275-29630751	2	+	29327275	29597659	789624	4	118,207,125,213,	0,2211,270294,303263,
#Partially deleted in new
chr21	29351633	29361894	chr21:29351633-29361894	3	+	29351633	29351633	8553170	4	180,85,213,343,	0,945,9397,9918,
#Partially deleted in new
chr21	29359001	29359453	chr21:29359001-29359453	3	+	29359001	29359001	8553170	1	452,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	29370018	29371226	chr21:29370018-29371226	0	-	29370018	29370018	8553170	2	102,139,	0,1069,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	29370058	29376339	chr21:29370058-29376339	3	-	29370058	29370058	8553170	2	158,542,	0,5739,
#Deleted in new
chr21	29370496	29370973	chr21:29370496-29370973	0	+	29370496	29370496	8553170	1	477,	0,
#Partially deleted in new
chr21	29370622	29373302	chr21:29370622-29373302	1	+	29370622	29370622	8553170	4	533,35,62,61,	0,1112,1879,2619,
#Partially deleted in new
chr21	29370946	29373709	chr21:29370946-29373709	3	+	29370946	29370946	8553170	3	209,129,468,	0,1488,2295,
#Partially deleted in new
chr21	29496046	29500386	chr21:29496046-29500386	3	+	29496046	29496046	789624	2	192,214,	0,4126,
#Partially deleted in new
chr21	29536932	29939532	chr21:29536932-29939532	1	-	29537229	29939500	789624	18	453,87,251,226,218,119,224,204,114,45,108,144,174,54,182,258,168,150,	0,865,18119,24691,40031,44492,50433,51906,54179,59593,61897,105893,114185,117877,136050,152795,156963,402450,
#Partially deleted in new
chr21	29536932	29939625	chr21:29536932-29939625	3	-	29537229	29939500	0	16	453,251,226,218,119,224,204,114,108,144,174,54,182,258,168,243,	0,18119,24691,40031,44492,50433,51906,54179,61897,105893,114185,117877,136050,152795,156963,402450,
#Partially deleted in new
chr21	29536932	29939674	chr21:29536932-29939674	1	-	29537229	29939500	789624	17	453,251,226,218,119,224,204,114,45,108,144,174,54,182,258,168,292,	0,18119,24691,40031,44492,50433,51906,54179,59593,61897,105893,114185,117877,136050,152795,156963,402450,
#Partially deleted in new
chr21	29536932	29940022	chr21:29536932-29940022	1	-	29537229	29939500	789624	17	453,87,251,226,218,119,224,204,114,108,144,174,54,182,258,168,640,	0,865,18119,24691,40031,44492,50433,51906,54179,61897,105893,114185,117877,136050,152795,156963,402450,
#Partially deleted in new
chr21	29537705	29939532	chr21:29537705-29939532	1	-	29537769	29939500	789624	17	73,251,226,218,119,224,204,114,45,108,144,174,54,182,258,168,150,	0,17346,23918,39258,43719,49660,51133,53406,58820,61124,105120,113412,117104,135277,152022,156190,401677,
#Partially deleted in new
chr21	29553251	29939912	chr21:29553251-29939912	1	-	29553554	29939500	0	17	453,251,226,218,119,224,204,114,45,108,144,174,54,182,258,168,530,	0,1800,8372,23712,28173,34114,35587,37860,43274,45578,89574,97866,101558,119731,136476,140644,386131,
#Partially deleted in new
chr21	29553251	29939912	chr21:29553251-29939912	1	-	29553554	29939500	789624	16	453,251,226,218,119,224,204,114,108,144,174,54,182,258,168,530,	0,1800,8372,23712,28173,34114,35587,37860,45578,89574,97866,101558,119731,136476,140644,386131,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	29596039	29630747	chr21:29596039-29630747	0	+	29596039	29596039	5263520	3	739,125,209,	0,1530,34499,
#Partially deleted in new
chr21	29598793	29940033	chr21:29598793-29940033	0	-	29598793	29598793	8553170	8	144,144,174,54,182,258,168,651,	0,44032,52324,56016,74189,90934,95102,340589,
#Deleted in new
chr21	29657405	29657831	chr21:29657405-29657831	3	+	29657405	29657405	8553170	1	426,	0,
#Partially deleted in new
chr21	29748174	29763680	chr21:29748174-29763680	3	+	29748174	29748174	5263520	5	126,312,180,46,103,	0,659,10656,11845,15403,
#Partially deleted in new
chr21	29748937	29764002	chr21:29748937-29764002	0	+	29748937	29748937	8553170	3	208,180,425,	0,9893,14640,
#Partially deleted in new
chr21	29748946	29764002	chr21:29748946-29764002	0	+	29748946	29748946	8553170	2	199,425,	0,14631,
#Partially deleted in new
chr21	29758830	29764002	chr21:29758830-29764002	1	+	29758830	29758830	8553170	4	184,46,163,425,	0,1189,2426,4747,
#Partially deleted in new
chr21	29760393	29764002	chr21:29760393-29764002	0	+	29760393	29760393	8553170	2	74,425,	0,3184,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	30089716	30097836	chr21:30089716-30097836	3	+	30089716	30089716	8553170	2	275,169,	0,7951,
#Deleted in new
chr21	30165563	30166756	chr21:30165563-30166756	3	-	30165942	30166617	789624	1	1193,	0,
#Deleted in new
chr21	30209150	30211783	chr21:30209150-30211783	3	-	30209150	30209150	789624	3	186,188,50,	0,587,2583,
#Deleted in new
chr21	30214005	30216073	chr21:30214005-30216073	3	-	30215247	30215925	789624	1	2068,	0,
#Deleted in new
chr21	30263379	30263881	chr21:30263379-30263881	7	-	30263379	30263379	16724991	1	502,	0,
#Deleted in new
chr21	30281308	30282958	chr21:30281308-30282958	3	-	30282167	30282932	789624	1	1650,	0,
#Deleted in new
chr21	30289144	30289514	chr21:30289144-30289514	3	-	30289181	30289490	789624	1	370,	0,
#Deleted in new
chr21	30319123	30320316	chr21:30319123-30320316	3	-	30319402	30320035	789624	1	1193,	0,
#Deleted in new
chr21	30337012	30337694	chr21:30337012-30337694	3	-	30337044	30337668	789624	1	682,	0,
#Deleted in new
chr21	30348398	30348609	chr21:30348398-30348609	3	-	30348408	30348606	789624	1	211,	0,
#Deleted in new
chr21	30356514	30356885	chr21:30356514-30356885	7	-	30356514	30356514	16724991	1	371,	0,
#Deleted in new
chr21	30371390	30372257	chr21:30371390-30372257	3	-	30371685	30372213	789624	1	867,	0,
#Deleted in new
chr21	30375293	30375378	chr21:30375293-30375378	3	-	30375293	30375293	5263520	1	85,	0,
#Deleted in new
chr21	30396073	30396822	chr21:30396073-30396822	3	+	30396086	30396605	789624	1	749,	0,
#Deleted in new
chr21	30425264	30425968	chr21:30425264-30425968	3	-	30425393	30425912	789624	1	704,	0,
#Deleted in new
chr21	30430229	30431026	chr21:30430229-30431026	3	+	30430275	30430758	789624	1	797,	0,
#Deleted in new
chr21	30436465	30436964	chr21:30436465-30436964	7	-	30436465	30436465	16724991	1	499,	0,
#Deleted in new
chr21	30440274	30440945	chr21:30440274-30440945	3	+	30440327	30440741	789624	1	671,	0,
#Partially deleted in new
chr21	30479698	30480344	chr21:30479698-30480344	3	-	30480044	30480317	789624	1	646,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	30487056	30487436	chr21:30487056-30487436	3	-	30487189	30487348	789624	1	380,	0,
#Partially deleted in new
chr21	30491463	30491985	chr21:30491463-30491985	3	-	30491711	30491957	789624	1	522,	0,
#Partially deleted in new
chr21	30496823	30497133	chr21:30496823-30497133	3	-	30496855	30497110	789624	1	310,	0,
#Partially deleted in new
chr21	30501656	30502117	chr21:30501656-30502117	3	-	30501871	30502090	789624	1	461,	0,
#Deleted in new
chr21	30510306	30510497	chr21:30510306-30510497	7	-	30510306	30510306	16724991	1	191,	0,
#Deleted in new
chr21	30514612	30514799	chr21:30514612-30514799	7	-	30514612	30514612	16724991	1	187,	0,
#Deleted in new
chr21	30526545	30526701	chr21:30526545-30526701	7	-	30526545	30526545	16724991	1	156,	0,
#Deleted in new
chr21	30537277	30537381	chr21:30537277-30537381	7	-	30537277	30537277	16724991	1	104,	0,
#Deleted in new
chr21	30541534	30541864	chr21:30541534-30541864	3	-	30541656	30541833	789624	1	330,	0,
#Deleted in new
chr21	30560874	30561314	chr21:30560874-30561314	3	-	30561097	30561289	789624	1	440,	0,
#Deleted in new
chr21	30590104	30590397	chr21:30590104-30590397	3	-	30590236	30590374	789624	1	293,	0,
#Deleted in new
chr21	30592439	30593075	chr21:30592439-30593075	3	+	30592445	30592778	789624	1	636,	0,
#Deleted in new
chr21	30598589	30598902	chr21:30598589-30598902	3	-	30598685	30598874	789624	1	313,	0,
#Deleted in new
chr21	30601086	30601382	chr21:30601086-30601382	3	+	30601120	30601267	789624	1	296,	0,
#Deleted in new
chr21	30613430	30613930	chr21:30613430-30613930	3	-	30613688	30613904	789624	1	500,	0,
#Deleted in new
chr21	30616424	30616699	chr21:30616424-30616699	3	+	30616454	30616625	789624	1	275,	0,
#Deleted in new
chr21	30620626	30620850	chr21:30620626-30620850	3	+	30620657	30620792	789624	1	224,	0,
#Deleted in new
chr21	30635235	30635619	chr21:30635235-30635619	3	+	30635263	30635461	789624	1	384,	0,
#Deleted in new
chr21	30642863	30643136	chr21:30642863-30643136	3	+	30642888	30643023	789624	1	273,	0,
#Deleted in new
chr21	30718524	30718777	chr21:30718524-30718777	3	-	30718582	30718759	789624	1	253,	0,
#Deleted in new
chr21	30741779	30742595	chr21:30741779-30742595	7	-	30741779	30741779	16724991	1	816,	0,
#Deleted in new
chr21	30746793	30747233	chr21:30746793-30747233	3	-	30746950	30747202	789624	1	440,	0,
#Deleted in new
chr21	30754829	30755428	chr21:30754829-30755428	3	-	30755138	30755378	789624	1	599,	0,
#Deleted in new
chr21	30762681	30762882	chr21:30762681-30762882	7	-	30762681	30762681	16724991	1	201,	0,
#Deleted in new
chr21	30802241	30802427	chr21:30802241-30802427	7	-	30802241	30802241	16724991	1	186,	0,
#Deleted in new
chr21	30806931	30807119	chr21:30806931-30807119	7	-	30806931	30806931	16724991	1	188,	0,
#Deleted in new
chr21	30812696	30813252	chr21:30812696-30813252	3	-	30813028	30813220	789624	1	556,	0,
#Deleted in new
chr21	30829038	30829759	chr21:30829038-30829759	3	-	30829434	30829698	789624	1	721,	0,
#Deleted in new
chr21	30880643	30881555	chr21:30880643-30881555	3	-	30881032	30881524	789624	1	912,	0,
#Deleted in new
chr21	31038158	31038476	chr21:31038158-31038476	3	-	31038251	31038443	789624	1	318,	0,
#Partially deleted in new
chr21	31060599	31063168	chr21:31060599-31063168	7	-	31060599	31060599	16724991	2	812,1447,	0,1122,
#Partially deleted in new
chr21	31118415	31558977	chr21:31118415-31558977	3	-	31120367	31266972	0	29	2422,173,88,103,59,109,119,180,109,126,69,180,104,225,87,82,105,171,75,147,186,225,173,448,974,177,180,53,51,	0,6106,8649,11797,12474,17517,22702,22909,28479,34220,34650,35831,46546,64005,68585,76808,84492,91629,94982,99137,104990,107310,127072,133326,147594,158316,220827,345567,440511,
#Partially deleted in new
chr21	31118417	31130221	chr21:31118417-31130221	0	-	31118542	31130221	789624	4	253,173,88,9,	0,6104,8647,11795,
#Partially deleted in new
chr21	31118417	31558977	chr21:31118417-31558977	1	-	31120367	31266972	0	27	2420,173,88,103,59,109,119,180,109,126,69,180,104,225,87,82,171,147,186,225,173,448,974,177,180,53,51,	0,6104,8647,11795,12472,17515,22700,22907,28477,34218,34648,35829,46544,64003,68583,76806,91627,99135,104988,107308,127070,133324,147592,158314,220825,345565,440509,
#Partially deleted in new
chr21	31118457	31160909	chr21:31118457-31160909	1	-	31120367	31160534	789624	13	2380,173,88,103,59,109,119,180,109,126,69,180,465,	0,6064,8607,11755,12432,17475,22660,22867,28437,34178,34608,35789,41987,
#Partially deleted in new
chr21	31123938	31130306	chr21:31123938-31130306	0	-	31123938	31123938	8553170	3	756,88,94,	0,3126,6274,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr21	31212630	31559977	chr21:31212630-31559977	0	-	31212630	31212630	8553170	9	842,147,186,225,173,448,180,53,59,	0,4922,10775,13095,32857,39111,126612,251352,347288,
#Partially deleted in new
chr21	31266295	31344279	chr21:31266295-31344279	0	-	31266295	31266972	789624	4	688,177,180,142,	0,10436,72947,77842,
#Deleted in new
chr21	31452465	31453223	chr21:31452465-31453223	7	+	31452465	31452465	16724991	1	758,	0,
#Deleted in new
chr21	31559244	31560487	chr21:31559244-31560487	3	+	31559244	31559244	8553170	2	351,471,	0,772,
#Partially deleted in new
chr21	31627126	31628600	chr21:31627126-31628600	7	-	31627126	31627126	16724991	1	1474,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	31653592	31659500	chr21:31653592-31659500	3	-	31653592	31653592	8553170	3	1835,294,104,	0,4341,5804,
#Partially deleted in new
chr21	31659621	31668931	chr21:31659621-31668931	3	+	31659769	31668578	0	5	220,97,70,118,461,	0,4168,6827,7636,8849,
#Partially deleted in new
chr21	31659665	31668931	chr21:31659665-31668931	1	+	31659769	31668578	789624	5	119,97,70,118,461,	0,4124,6783,7592,8805,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	31659692	31667341	chr21:31659692-31667341	0	+	31659692	31659692	8553170	5	149,186,97,70,84,	0,1856,4097,6756,7565,
#Partially deleted in new
chr21	31659708	31668931	chr21:31659708-31668931	0	+	31659708	31659708	8553170	5	1000,97,70,118,461,	0,4081,6740,7549,8762,
#Deleted in new
chr21	31664305	31664482	chr21:31664305-31664482	3	+	31664305	31664305	8553170	1	177,	0,
#Deleted in new
chr21	31666727	31667247	chr21:31666727-31667247	3	-	31666727	31666727	8553170	1	520,	0,
#Partially deleted in new
chr21	31671032	31732075	chr21:31671032-31732075	3	-	31671398	31731692	789624	20	1322,192,87,166,158,157,114,101,191,86,168,109,182,177,143,136,162,45,84,413,	0,14016,14365,14535,17274,19764,20784,21316,22261,23171,23780,25080,25536,29962,30743,31211,32732,34390,35241,60630,
#Partially deleted in new
chr21	31671032	31732075	chr21:31671032-31732075	1	-	31671398	31731692	789624	20	1322,126,87,166,158,157,114,101,191,86,168,109,182,177,143,136,162,45,84,413,	0,14016,14365,14535,17274,19764,20784,21316,22261,23171,23780,25080,25536,29962,30743,31211,32732,34390,35241,60630,
#Partially deleted in new
chr21	31671227	31731968	chr21:31671227-31731968	1	-	31671398	31731692	789624	19	1127,192,87,166,158,157,114,101,191,86,168,109,182,177,143,136,162,84,306,	0,13821,14170,14340,17079,19569,20589,21121,22066,22976,23585,24885,25341,29767,30548,31016,32537,35046,60435,
#Partially deleted in new
chr21	31683994	31701823	chr21:31683994-31701823	0	-	31683994	31683994	8553170	14	1246,87,166,158,157,114,101,191,86,168,109,168,177,48,	0,1403,1573,4312,6802,7822,8354,9299,10209,10818,12118,12574,17000,17781,
#Deleted in new
chr21	31690820	31693330	chr21:31690820-31693330	0	-	31690820	31690820	8553170	3	133,626,37,	0,996,2473,
#Partially deleted in new
chr21	31700758	31731961	chr21:31700758-31731961	0	-	31700758	31700758	8553170	7	413,143,136,162,45,84,299,	0,1017,1485,3006,4664,5515,30904,
#Deleted in new
chr21	31706554	31706864	chr21:31706554-31706864	7	+	31706554	31706554	16724991	1	310,	0,
#Deleted in new
chr21	31735731	31736407	chr21:31735731-31736407	3	+	31735731	31735731	8553170	1	676,	0,
#Deleted in new
chr21	31840340	31840858	chr21:31840340-31840858	7	+	31840340	31840340	16724991	1	518,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr21	31873314	32004064	chr21:31873314-32004064	3	+	31873674	31999184	789624	11	621,293,56,136,128,136,163,84,48,181,5539,	0,51153,66850,72721,85528,94935,101240,110211,116814,122453,125211,
#Partially deleted in new
chr21	31924551	31968334	chr21:31924551-31968334	0	+	31924551	31968334	789624	4	209,56,136,85,	0,15613,21484,43698,
#Partially deleted in new
chr21	31974177	31995927	chr21:31974177-31995927	0	+	31974177	31974177	8553170	4	540,84,48,160,	0,9348,15951,21590,
#Partially deleted in new
chr21	31974702	32044633	chr21:31974702-32044633	0	+	31974702	32044112	789624	5	15,84,48,181,532,	0,8823,15426,21065,69399,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	32020965	32021782	chr21:32020965-32021782	3	-	32020965	32020965	8553170	2	313,303,	0,514,
#Partially deleted in new
chr21	32080315	32086295	chr21:32080315-32086295	1	-	32080315	32080315	8553170	3	202,144,92,	0,3158,5888,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	32259803	32261585	chr21:32259803-32261585	3	-	32259803	32259803	8553170	1	1782,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	32268218	32279069	chr21:32268218-32279069	3	-	32269036	32279014	789624	5	899,97,123,67,389,	0,1488,2188,6611,10462,
#Partially deleted in new
chr21	32269607	32270578	chr21:32269607-32270578	0	-	32269607	32269607	8553170	2	196,172,	0,799,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	32277862	32280988	chr21:32277862-32280988	3	+	32277862	32277862	8553170	3	222,151,396,	0,518,2730,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	32291812	32312290	chr21:32291812-32312290	3	+	32298971	32311996	789624	5	37,140,116,100,607,	0,1180,7149,14827,19871,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	32291812	32312290	chr21:32291812-32312290	0	+	32291812	32291812	8553170	4	37,140,100,607,	0,1180,14827,19871,
#Partially deleted in new
chr21	32298849	32312290	chr21:32298849-32312290	1	+	32298971	32311996	789624	3	228,100,607,	0,7790,12834,
#Partially deleted in new
chr21	32298971	32314784	chr21:32298971-32314784	1	+	32298971	32314653	789624	3	106,100,234,	0,7668,15579,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	32306463	32308737	chr21:32306463-32308737	3	-	32306463	32306463	8553170	2	363,219,	0,2055,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr21	32311017	32393026	chr21:32311017-32393026	3	-	32314917	32392910	789624	39	4082,600,242,198,110,144,107,112,161,103,172,64,111,194,59,187,202,856,180,219,197,171,139,117,120,113,117,130,174,138,196,125,126,86,97,133,152,140,258,	0,5448,6658,8199,9513,10783,11460,13473,14211,22299,23145,26076,26386,27689,30448,33552,34356,35938,38286,39686,41692,42915,43841,44431,46519,48778,49989,50874,52138,55600,57385,61489,62629,64380,67427,72404,73295,74527,81751,
#Partially deleted in new
chr21	32333112	32334334	chr21:32333112-32334334	0	-	32333112	32333112	8553170	2	307,172,	0,1050,
#Deleted in new
chr21	32334208	32335630	chr21:32334208-32335630	0	-	32334208	32334208	8553170	2	126,425,	0,997,
#Partially deleted in new
chr21	32377186	32377322	chr21:32377186-32377322	3	-	32377186	32377186	5263520	1	136,	0,
#Deleted in new
chr21	32393129	32393960	chr21:32393129-32393960	3	+	32393129	32393129	789624	1	831,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	32412005	32468055	chr21:32412005-32468055	0	+	32412005	32412005	8553170	4	1008,197,124,360,	0,41306,45591,55690,
#Partially deleted in new
chr21	32412041	32501455	chr21:32412041-32501455	0	+	32412041	32412041	8553170	5	152,197,153,144,41,	0,41270,55654,82985,89373,
#Partially deleted in new
chr21	32412380	32515389	chr21:32412380-32515389	3	+	32412853	32515190	789624	8	633,197,124,153,144,81,90,576,	0,40931,45216,55315,82646,89034,91545,102433,
#Partially deleted in new
chr21	32412436	32515389	chr21:32412436-32515389	0	+	32412853	32457649	789624	6	577,124,153,81,90,576,	0,45160,55259,88978,91489,102377,
#Partially deleted in new
chr21	32412436	32515389	chr21:32412436-32515389	0	+	32412853	32457649	789624	7	577,124,153,144,81,90,576,	0,45160,55259,82590,88978,91489,102377,
#Partially deleted in new
chr21	32412552	32515389	chr21:32412552-32515389	0	+	32412853	32501536	789624	6	461,153,144,124,90,576,	0,55143,82474,88862,91373,102261,
#Partially deleted in new
chr21	32412684	32515397	chr21:32412684-32515397	1	+	32412853	32515190	789624	7	329,197,124,153,81,90,584,	0,40627,44912,55011,88730,91241,102129,
#Partially deleted in new
chr21	32412701	32515389	chr21:32412701-32515389	1	+	32412853	32515190	789624	8	312,197,124,153,144,72,90,576,	0,40610,44895,54994,82325,88713,91224,102112,
#Partially deleted in new
chr21	32412763	32433284	chr21:32412763-32433284	0	+	32412763	32412763	8553170	2	250,134,	0,20387,
#Partially deleted in new
chr21	32428333	32495137	chr21:32428333-32495137	0	+	32453436	32495137	789624	5	351,197,124,153,111,	0,24978,29263,39362,66693,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	32452184	32515389	chr21:32452184-32515389	0	+	32452184	32452184	8553170	7	1324,124,153,144,81,90,576,	0,5412,15511,42842,49230,51741,62629,
#Partially deleted in new
chr21	32493652	32514880	chr21:32493652-32514880	0	+	32493652	32493652	8553170	5	110,144,81,90,67,	0,1374,7762,10273,21161,
#Partially deleted in new
chr21	32495116	32515389	chr21:32495116-32515389	0	+	32495116	32495116	8553170	3	54,90,576,	0,8809,19697,
#Deleted in new
chr21	32496811	32497311	chr21:32496811-32497311	7	+	32496811	32496811	16724991	1	500,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	32538298	32538434	chr21:32538298-32538434	3	+	32538298	32538298	8553170	1	136,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	32563074	32563210	chr21:32563074-32563210	7	+	32563074	32563074	16724991	1	136,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	32572237	32575881	chr21:32572237-32575881	3	-	32572237	32572237	8553170	4	358,85,29,1306,	0,1046,1858,2338,
#Partially deleted in new
chr21	32574840	32585533	chr21:32574840-32585533	3	-	32576773	32584304	789624	5	2083,138,216,145,113,	0,3853,7359,9320,10580,
#Partially deleted in new
chr21	32576658	32585533	chr21:32576658-32585533	1	-	32576773	32582301	789624	4	265,138,216,113,	0,2035,5541,8762,
#Partially deleted in new
chr21	32576658	32582434	chr21:32576658-32582434	0	-	32577589	32582301	789624	4	265,251,138,235,	0,767,2035,5541,
#Partially deleted in new
chr21	32576847	32587373	chr21:32576847-32587373	0	-	32576847	32584304	789624	5	76,138,216,145,61,	0,1846,5352,7313,10465,
#Partially deleted in new
chr21	32578821	32612146	chr21:32578821-32612146	2	-	32578821	32612146	789624	8	10,216,96,132,159,68,168,42,	0,3378,23450,24339,25303,28827,31016,33283,
#Partially deleted in new
chr21	32578822	32612281	chr21:32578822-32612281	1	-	32578822	32612243	789624	7	9,216,132,159,68,168,177,	0,3377,24338,25302,28826,31015,33282,
#Partially deleted in new
chr21	32592078	32603237	chr21:32592078-32603237	0	-	32592256	32603237	789624	2	340,77,	0,11082,
#Partially deleted in new
chr21	32601666	32612866	chr21:32601666-32612866	3	-	32601862	32612243	789624	7	307,96,132,159,68,168,762,	0,605,1494,2458,5982,8171,10438,
#Partially deleted in new
chr21	32601666	32612586	chr21:32601666-32612586	1	-	32603088	32612243	789624	5	1626,159,68,168,482,	0,2458,5982,8171,10438,
#Partially deleted in new
chr21	32601666	32612352	chr21:32601666-32612352	0	-	32601862	32612243	789624	6	307,132,159,68,168,248,	0,1494,2458,5982,8171,10438,
#Deleted in new
chr21	32601702	32604200	chr21:32601702-32604200	0	-	32602223	32604200	789624	3	665,132,76,	0,1458,2422,
#Partially deleted in new
chr21	32601784	32612603	chr21:32601784-32612603	0	-	32604173	32612243	789624	6	189,96,132,159,168,499,	0,487,1376,2340,8053,10320,
#Deleted in new
chr21	32601809	32604513	chr21:32601809-32604513	0	-	32601809	32601809	8553170	2	1483,389,	0,2315,
#Partially deleted in new
chr21	32603224	32612555	chr21:32603224-32612555	0	-	32603224	32612243	789624	5	68,159,68,117,451,	0,900,4424,6613,8880,
#Deleted in new
chr21	32621083	32622083	chr21:32621083-32622083	7	+	32621083	32621083	16724991	1	1000,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	32624415	32625096	chr21:32624415-32625096	7	-	32624415	32624415	16724991	2	78,312,	0,369,
#Partially deleted in new
chr21	32628758	32727939	chr21:32628758-32727939	1	-	32634863	32726895	789624	32	3043,24,218,109,71,39,39,144,210,163,79,216,118,157,159,193,141,85,192,24,157,153,82,170,97,62,84,226,268,87,146,103,	0,6102,10149,10912,13137,13336,16209,16887,17634,21425,24529,27928,28244,28957,36154,37184,37674,41529,44581,47573,49886,52737,55279,56989,58219,59547,65469,66298,71079,73202,98013,99078,
#Partially deleted in new
chr21	32628758	32728040	chr21:32628758-32728040	1	-	32634863	32726895	789624	29	3043,24,218,109,71,144,210,163,79,216,118,157,159,193,141,85,192,166,153,82,170,97,62,84,226,268,87,146,95,	0,6102,10149,10912,13137,16887,17634,21425,24529,27928,28244,28957,36154,37184,37674,41529,44581,49886,52737,55279,56989,58219,59547,65469,66298,71079,73202,98013,99187,
#Partially deleted in new
chr21	32628762	32645710	chr21:32628762-32645710	0	-	32634863	32645710	789624	8	3039,24,218,109,71,39,39,65,	0,6098,10145,10908,13133,13332,16205,16883,
#Partially deleted in new
chr21	32628763	32728040	chr21:32628763-32728040	1	-	32634863	32728040	789624	33	3038,24,218,109,71,39,48,39,144,210,163,79,216,118,157,159,193,141,85,192,24,157,153,82,170,97,62,84,226,268,87,146,95,	0,6097,10144,10907,13132,13331,14646,16204,16882,17629,21420,24524,27923,28239,28952,36149,37179,37669,41524,44576,47568,49881,52732,55274,56984,58214,59542,65464,66293,71074,73197,98008,99182,
#Partially deleted in new
chr21	32628763	32727900	chr21:32628763-32727900	1	-	32630994	32726895	789624	28	3038,218,109,71,144,210,163,79,216,118,157,159,193,141,85,192,166,153,82,170,97,62,84,226,268,87,146,64,	0,10144,10907,13132,16882,17629,21420,24524,27923,28239,28952,36149,37179,37669,41524,44576,49881,52732,55274,56984,58214,59542,65464,66293,71074,73197,98008,99073,
#Partially deleted in new
chr21	32630989	32728048	chr21:32630989-32728048	3	-	32630994	32728040	789624	32	812,218,109,71,39,48,39,144,210,163,79,216,118,157,159,193,141,85,192,24,157,153,82,170,97,62,84,226,268,87,146,103,	0,7918,8681,10906,11105,12420,13978,14656,15403,19194,22298,25697,26013,26726,33923,34953,35443,39298,42350,45342,47655,50506,53048,54758,55988,57316,63238,64067,68848,70971,95782,96956,
#Partially deleted in new
chr21	32631777	32641945	chr21:32631777-32641945	0	-	32634863	32641945	789624	5	24,21,218,109,50,	0,3083,7130,7893,10118,
#Partially deleted in new
chr21	32650183	32654101	chr21:32650183-32654101	0	-	32650183	32650183	8553170	2	163,814,	0,3104,
#Partially deleted in new
chr21	32665985	32727939	chr21:32665985-32727939	0	-	32665985	32726895	789624	16	150,141,85,192,166,153,82,170,97,62,84,226,268,87,146,103,	0,447,4302,7354,12659,15510,18052,19762,20992,22320,28242,29071,33852,35975,60786,61851,
#Partially deleted in new
chr21	32695225	32726942	chr21:32695225-32726942	0	-	32695225	32726895	789624	4	57,268,87,171,	0,4612,6735,31546,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	32728114	32732916	chr21:32728114-32732916	0	+	32728114	32728114	789624	2	2547,398,	0,4404,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	32728138	32743122	chr21:32728138-32743122	3	+	32728138	32728138	789624	4	2523,69,70,861,	0,5450,10133,14123,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	32730351	32737473	chr21:32730351-32737473	0	+	32730351	32730351	8553170	3	310,69,101,	0,3237,7021,
#Partially deleted in new
chr21	32733898	32771858	chr21:32733898-32771858	3	-	32734949	32771668	789624	18	1169,155,147,67,77,122,145,200,116,100,124,190,218,104,222,177,129,533,	0,3355,4274,9349,9779,10893,11675,14600,17018,17220,21331,25181,25878,27160,28197,30449,35915,37427,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr21	32733899	32756794	chr21:32733899-32756794	0	-	32733899	32733899	8553170	11	1168,155,147,67,77,122,145,200,116,100,1582,	0,3354,4273,9348,9778,10892,11674,14599,17017,17219,21313,
#Partially deleted in new
chr21	32734819	32771687	chr21:32734819-32771687	0	-	32751206	32771668	789624	18	248,155,147,67,77,122,145,200,116,100,141,190,218,104,222,177,129,362,	0,2434,3353,8428,8858,9972,10754,13679,16097,16299,20393,24260,24957,26239,27276,29528,34994,36506,
#Partially deleted in new
chr21	32734825	32752124	chr21:32734825-32752124	0	-	32734825	32734825	8553170	10	242,155,147,67,77,122,145,200,116,1006,	0,2428,3347,8422,8852,9966,10748,13673,16091,16293,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr21	32741392	32771668	chr21:32741392-32771668	1	-	32741508	32771668	789624	16	230,67,77,122,145,200,116,100,124,190,218,104,222,177,129,343,	0,1855,2285,3399,4181,7106,9524,9726,13837,17687,18384,19666,20703,22955,28421,29933,
#Partially deleted in new
chr21	32748558	32755311	chr21:32748558-32755311	0	-	32751206	32755311	789624	3	140,100,99,	0,2560,6654,
#Partially deleted in new
chr21	32756341	32771668	chr21:32756341-32771668	0	-	32756341	32756341	8553170	8	27,190,218,104,222,177,129,343,	0,2738,3435,4717,5754,8006,13472,14984,
#Partially deleted in new
chr21	32759401	32771792	chr21:32759401-32771792	0	-	32759401	32759401	8553170	6	593,104,222,177,129,467,	0,1657,2694,4946,10412,11924,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	32772099	32798969	chr21:32772099-32798969	3	+	32772099	32772099	789624	4	209,123,90,2031,	0,12697,16512,24839,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	32772124	32797707	chr21:32772124-32797707	0	+	32772124	32772124	8553170	2	148,769,	0,24814,
#Partially deleted in new
chr21	32772149	32893735	chr21:32772149-32893735	0	+	32772149	32772149	8553170	4	123,145,137,158,	0,12625,113782,121428,
#Partially deleted in new
chr21	32772160	32852470	chr21:32772160-32852470	0	+	32772160	32772160	8553170	3	148,123,722,	0,12636,79588,
#Partially deleted in new
chr21	32772161	32797168	chr21:32772161-32797168	0	+	32772161	32772161	8553170	4	159,123,90,230,	0,12635,16450,24777,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	32772173	32797446	chr21:32772173-32797446	0	+	32772173	32772173	8553170	3	135,90,508,	0,16438,24765,
#Partially deleted in new
chr21	32772187	32797094	chr21:32772187-32797094	0	+	32772187	32772187	8553170	3	121,123,156,	0,12609,24751,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	32790672	32791504	chr21:32790672-32791504	3	-	32790672	32790672	8553170	1	832,	0,
#Partially deleted in new
chr21	32793563	32813743	chr21:32793563-32813743	3	-	32793761	32794421	789624	3	922,81,152,	0,17010,20028,
#Partially deleted in new
chr21	32793564	32813679	chr21:32793564-32813679	1	-	32793761	32794421	789624	2	921,88,	0,20027,
#Partially deleted in new
chr21	32793684	32813689	chr21:32793684-32813689	0	-	32793761	32813689	789624	3	699,81,98,	0,16889,19907,
#Partially deleted in new
chr21	32793720	32813634	chr21:32793720-32813634	1	-	32793761	32794421	789624	4	765,75,81,43,	0,13921,16853,19871,
#Partially deleted in new
chr21	32841495	32841811	chr21:32841495-32841811	7	-	32841495	32841495	16724991	1	316,	0,
#Partially deleted in new
chr21	32841860	32841995	chr21:32841860-32841995	3	-	32841860	32841860	8553170	1	135,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	32844366	32849934	chr21:32844366-32849934	3	-	32844366	32844366	8553170	2	344,40,	0,5528,
#Partially deleted in new
chr21	32913648	33071104	chr21:32913648-33071104	3	-	32913648	32913648	8553170	2	481,201,	0,157255,
#Partially deleted in new
chr21	32958887	32960566	chr21:32958887-32960566	3	+	32958887	32958887	789624	2	202,374,	0,1305,
#Deleted in new
chr21	33025844	33029196	chr21:33025844-33029196	3	+	33026862	33027834	789624	2	182,2396,	0,956,
#Deleted in new
chr21	33025934	33029196	chr21:33025934-33029196	1	+	33026862	33027834	789624	1	3262,	0,
#Deleted in new
chr21	33025934	33027049	chr21:33025934-33027049	0	+	33026862	33027049	789624	2	326,249,	0,866,
#Partially deleted in new
chr21	33057828	33064983	chr21:33057828-33064983	3	+	33057828	33057828	789624	5	70,104,25,173,381,	0,272,4963,6447,6774,
#Deleted in new
chr21	33070143	33072420	chr21:33070143-33072420	3	+	33070246	33071062	789624	1	2277,	0,
#Deleted in new
chr21	33070964	33072413	chr21:33070964-33072413	0	+	33070964	33071062	789624	2	721,362,	0,1087,
#Deleted in new
chr21	33071667	33072413	chr21:33071667-33072413	0	+	33071667	33071667	8553170	2	38,362,	0,384,
#Partially deleted in new
chr21	33111698	33123703	chr21:33111698-33123703	3	-	33111698	33111698	789624	3	1031,238,92,	0,2687,11913,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	33156631	33159110	chr21:33156631-33159110	3	+	33156631	33156631	8553170	2	114,335,	0,2144,
#Partially deleted in new
chr21	33165469	33170649	chr21:33165469-33170649	3	-	33165469	33165469	8553170	5	222,139,138,111,86,	0,2973,4226,4671,5094,
#Partially deleted in new
chr21	33165610	33170236	chr21:33165610-33170236	0	-	33165610	33165610	789624	4	81,139,138,96,	0,2832,4085,4530,
#Partially deleted in new
chr21	33229900	33262756	chr21:33229900-33262756	1	+	33241922	33262716	0	9	316,92,42,124,173,146,169,131,196,	0,11985,13772,15050,16817,18808,22761,30696,32660,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr21	33229900	33297160	chr21:33229900-33297160	1	+	33241922	33263500	8553170	15	316,92,42,124,173,146,169,131,845,124,158,167,148,158,977,	0,11985,13772,15050,16817,18808,22761,30696,32892,38493,46695,49851,53193,58203,66283,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr21	33229970	33265675	chr21:33229970-33265675	1	+	33241922	33262716	0	9	246,138,42,124,173,146,169,131,3115,	0,11869,13702,14980,16747,18738,22691,30626,32590,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr21	33229973	33264525	chr21:33229973-33264525	3	+	33241922	33263500	0	9	243,138,42,124,173,146,169,131,1733,	0,11866,13699,14977,16744,18735,22688,30623,32819,
#Partially deleted in new
chr21	33229981	33246853	chr21:33229981-33246853	0	+	33229981	33229981	8553170	4	235,92,42,136,	0,11904,13691,16736,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr21	33230135	33264525	chr21:33230135-33264525	1	+	33241922	33262803	0	8	81,138,42,124,173,146,169,1733,	0,11704,13537,14815,16582,18573,22526,32657,
#Partially deleted in new
chr21	33230140	33262855	chr21:33230140-33262855	0	+	33241922	33252191	789624	10	76,92,42,124,173,146,111,169,131,63,	0,11745,13532,14810,16577,18568,21997,22521,30456,32652,
#Partially deleted in new
chr21	33230181	33262855	chr21:33230181-33262855	1	+	33245069	33262803	789624	6	35,124,173,146,169,63,	0,14769,16536,18527,22480,32611,
#Partially deleted in new
chr21	33230181	33262855	chr21:33230181-33262855	0	+	33245069	33262855	789624	7	35,124,173,146,169,131,63,	0,14769,16536,18527,22480,30415,32611,
#Partially deleted in new
chr21	33230408	33248854	chr21:33230408-33248854	0	+	33230522	33248854	789624	6	149,92,42,124,173,146,	0,11477,13264,14542,16309,18300,
#Partially deleted in new
chr21	33246773	33283212	chr21:33246773-33283212	2	+	33246773	33283212	789624	7	117,146,169,124,158,167,119,	0,1935,5888,21620,29822,32978,36320,
#Partially deleted in new
chr21	33248714	33283212	chr21:33248714-33283212	0	+	33248714	33276624	789624	5	140,169,158,167,119,	0,3947,27881,31037,34379,
#Partially deleted in new
chr21	33248743	33262757	chr21:33248743-33262757	0	+	33248743	33252191	789624	5	111,111,169,131,197,	0,3394,3918,11853,13817,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	33263872	33266260	chr21:33263872-33266260	3	-	33263872	33263872	8553170	2	2030,198,	0,2190,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	33266357	33297234	chr21:33266357-33297234	3	+	33266465	33296357	0	7	157,124,158,167,148,158,1051,	0,2036,10238,13394,16736,21746,29826,
#Partially deleted in new
chr21	33266381	33296239	chr21:33266381-33296239	0	+	33266465	33279794	789624	6	133,124,167,148,158,56,	0,2012,13370,16712,21722,29802,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	33267927	33296953	chr21:33267927-33296953	0	+	33267927	33267927	8553170	6	590,158,167,148,158,770,	0,8668,11824,15166,20176,28256,
#Partially deleted in new
chr21	33268281	33288120	chr21:33268281-33288120	0	+	33268281	33268281	8553170	4	236,167,148,17,	0,11470,14812,19822,
#Partially deleted in new
chr21	33276611	33296350	chr21:33276611-33296350	0	+	33276611	33294047	789624	6	142,167,148,158,116,167,	0,3140,6482,11492,17400,19572,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	33288132	33310187	chr21:33288132-33310187	0	+	33288132	33308981	789624	2	129,1212,	0,20843,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	33288132	33310187	chr21:33288132-33310187	0	+	33288132	33308322	789624	2	129,2003,	0,20052,
#Partially deleted in new
chr21	33324476	33335611	chr21:33324476-33335611	0	+	33324476	33324476	8553170	2	162,88,	0,11047,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr21	33324903	33359862	chr21:33324903-33359862	3	+	33325055	33355549	0	11	228,124,176,155,142,115,200,155,151,146,4547,	0,10620,16095,18364,18631,20342,24187,24485,27854,28734,30412,
#Partially deleted in new
chr21	33324972	33345277	chr21:33324972-33345277	0	+	33325055	33345277	789624	4	159,124,176,32,	0,10551,16026,20273,
#Deleted in new
chr21	33334570	33335096	chr21:33334570-33335096	7	+	33334570	33334570	16724991	1	526,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	33402895	33437521	chr21:33402895-33437521	3	+	33403543	33436962	0	7	721,133,206,149,160,158,694,	0,11992,18584,23988,29281,29818,33932,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	33403426	33432216	chr21:33403426-33432216	0	+	33403543	33411527	789624	7	190,57,131,133,206,149,40,	0,7409,8018,11461,18053,23457,28750,
#Partially deleted in new
chr21	33403431	33437521	chr21:33403431-33437521	1	+	33403543	33436962	789624	8	185,57,133,206,149,160,158,694,	0,7404,11456,18048,23452,28745,29282,33396,
#Partially deleted in new
chr21	33403440	33436944	chr21:33403440-33436944	0	+	33403543	33421520	789624	6	176,206,149,160,158,117,	0,18039,23443,28736,29273,33387,
#Partially deleted in new
chr21	33403465	33437502	chr21:33403465-33437502	1	+	33421510	33436962	789624	8	151,52,133,206,149,160,158,675,	0,7375,11422,18014,23418,28711,29248,33362,
#Partially deleted in new
chr21	33432318	33479348	chr21:33432318-33479348	0	+	33432318	33478803	789624	3	18,158,551,	0,395,46479,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr21	33432484	33479943	chr21:33432484-33479943	2	-	33450817	33468885	789624	9	318,84,2082,58,93,68,113,140,106,	0,6729,16297,23242,27928,32857,34525,36302,47353,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	33432484	33448964	chr21:33432484-33448964	0	-	33432484	33432484	8553170	4	318,110,84,183,	0,4398,6729,16297,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	33432797	33449410	chr21:33432797-33449410	0	-	33432797	33432797	8553170	4	5,84,98,177,	0,6416,15984,16436,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	33449134	33480011	chr21:33449134-33480011	1	-	33450817	33468885	789624	7	1729,58,93,68,113,140,174,	0,6592,11278,16207,17875,19652,30703,
#Partially deleted in new
chr21	33450520	33468926	chr21:33450520-33468926	0	-	33460469	33468885	789624	4	343,58,93,140,	0,5206,9892,18266,
#Partially deleted in new
chr21	33450546	33479936	chr21:33450546-33479936	0	-	33456014	33468885	789624	8	317,58,94,93,68,113,140,99,	0,5180,5457,9866,14795,16463,18240,29291,
#Partially deleted in new
chr21	33465017	33467135	chr21:33465017-33467135	0	-	33465017	33465017	8553170	2	392,126,	0,1992,
#Partially deleted in new
chr21	33465377	33479289	chr21:33465377-33479289	0	-	33465377	33468885	789624	5	32,113,140,153,181,	0,1632,3409,4153,13731,
#Partially deleted in new
chr21	33468419	33479948	chr21:33468419-33479948	0	-	33468419	33468419	8553170	2	507,111,	0,11418,
#Deleted in new
chr21	33481579	33482195	chr21:33481579-33482195	7	-	33481579	33481579	16724991	1	616,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	33485529	33491473	chr21:33485529-33491473	3	-	33488226	33489393	789624	3	219,1610,408,	0,2285,5536,
#Partially deleted in new
chr21	33488189	33491720	chr21:33488189-33491720	1	-	33488226	33489393	789624	2	1235,119,	0,3412,
#Partially deleted in new
chr21	33488207	33491473	chr21:33488207-33491473	1	-	33488226	33489393	789624	2	1217,408,	0,2858,
#Partially deleted in new
chr21	33488218	33491691	chr21:33488218-33491691	1	-	33488226	33489393	789624	2	1206,274,	0,3199,
#Partially deleted in new
chr21	33503930	33542138	chr21:33503930-33542138	1	-	33504123	33539315	0	22	385,116,142,131,138,207,153,252,199,110,95,232,169,86,88,126,69,112,175,96,186,74,	0,481,1630,2043,5852,7321,13058,13426,16433,16975,18257,20838,24236,24588,24919,26828,27558,28414,30648,31294,35240,38134,
#Partially deleted in new
chr21	33503930	33542842	chr21:33503930-33542842	1	-	33504123	33539315	0	22	385,116,142,131,138,207,153,252,199,110,95,232,169,86,88,126,69,112,175,96,153,256,	0,481,1630,2043,5852,7321,13058,13426,16433,16975,18257,20838,24236,24588,24919,26828,27558,28414,30648,31294,35240,38656,
#Partially deleted in new
chr21	33503930	33542861	chr21:33503930-33542861	3	-	33504123	33539315	0	22	385,116,142,131,138,207,153,252,199,110,95,232,169,86,88,126,69,112,175,96,186,202,	0,481,1630,2043,5852,7321,13058,13426,16433,16975,18257,20838,24236,24588,24919,26828,27558,28414,30648,31294,35240,38729,
#Partially deleted in new
chr21	33503932	33542892	chr21:33503932-33542892	0	-	33528315	33539315	789624	22	383,116,142,131,138,207,153,252,199,110,95,232,169,90,88,126,69,112,175,96,186,302,	0,479,1628,2041,5850,7319,13056,13424,16431,16973,18255,20836,24234,24582,24917,26826,27556,28412,30646,31292,35238,38658,
#Partially deleted in new
chr21	33506039	33510333	chr21:33506039-33510333	0	-	33506039	33506039	8553170	2	65,551,	0,3743,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	33509187	33511304	chr21:33509187-33511304	0	-	33509187	33509187	8553170	2	733,53,	0,2064,
#Deleted in new
chr21	33518609	33519108	chr21:33518609-33519108	7	-	33518609	33518609	16724991	1	499,	0,
#Partially deleted in new
chr21	33520521	33524828	chr21:33520521-33524828	0	-	33520521	33520521	8553170	4	124,110,95,60,	0,384,1666,4247,
#Partially deleted in new
chr21	33522190	33528764	chr21:33522190-33528764	0	-	33522190	33522190	8553170	3	92,232,598,	0,2578,5976,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr21	33524008	33542114	chr21:33524008-33542114	1	-	33524764	33539315	0	11	992,169,86,88,126,69,112,175,96,186,50,	0,4158,4510,4841,6750,7480,8336,10570,11216,15162,18056,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr21	33528265	33534630	chr21:33528265-33534630	0	-	33529690	33534630	789624	8	70,86,88,202,126,69,112,52,	0,253,584,1301,2493,3223,4079,6313,
#Partially deleted in new
chr21	33528562	33531282	chr21:33528562-33531282	0	-	33528562	33528562	8553170	3	42,88,524,	0,287,2196,
#Partially deleted in new
chr21	33530709	33534679	chr21:33530709-33534679	0	-	33530709	33530709	8553170	4	175,69,112,101,	0,779,1635,3869,
#Partially deleted in new
chr21	33530758	33543491	chr21:33530758-33543491	0	-	33530758	33539315	789624	7	126,69,112,175,96,186,272,	0,730,1586,3820,4466,8412,12461,
#Partially deleted in new
chr21	33530786	33542793	chr21:33530786-33542793	0	-	33530786	33539315	789624	7	98,69,112,175,96,153,134,	0,702,1558,3792,4438,8384,11873,
#Partially deleted in new
chr21	33531335	33542079	chr21:33531335-33542079	0	-	33531335	33531335	8553170	6	222,112,175,96,186,15,	0,1009,3243,3889,7835,10729,
#Partially deleted in new
chr21	33531772	33534672	chr21:33531772-33534672	0	-	33531772	33531772	8553170	2	684,94,	0,2806,
#Partially deleted in new
chr21	33534578	33542820	chr21:33534578-33542820	0	-	33534578	33539315	789624	4	175,96,153,273,	0,646,4592,7969,
#Partially deleted in new
chr21	33534586	33542363	chr21:33534586-33542363	0	-	33534586	33539315	789624	4	167,96,153,299,	0,638,4584,7478,
#Partially deleted in new
chr21	33542617	33577481	chr21:33542617-33577481	3	+	33543092	33576424	789624	12	552,167,5916,161,147,189,111,117,148,72,116,1117,	0,3595,6858,14538,16612,16969,24539,26353,30690,32978,33160,33747,
#Partially deleted in new
chr21	33543051	33577481	chr21:33543051-33577481	1	+	33543092	33576424	789624	11	118,167,161,147,189,111,117,148,72,116,1117,	0,3161,14104,16178,16535,24105,25919,30256,32544,32726,33313,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	33543051	33546752	chr21:33543051-33546752	0	+	33543051	33543051	8553170	2	118,540,	0,3161,
#Partially deleted in new
chr21	33543063	33560667	chr21:33543063-33560667	1	+	33543092	33560131	789624	7	106,167,5916,161,147,189,791,	0,3149,6412,14092,16166,16523,16813,
#Partially deleted in new
chr21	33543063	33577481	chr21:33543063-33577481	0	+	33543092	33573320	789624	13	106,167,5916,161,147,189,111,117,80,148,72,116,1064,	0,3149,6412,14092,16166,16523,24093,25907,29487,30244,32532,32714,33354,
#Partially deleted in new
chr21	33543064	33559056	chr21:33543064-33559056	1	+	33543092	33557551	789624	5	105,167,5916,161,1511,	0,3148,6411,14091,14481,
#Deleted in new
chr21	33550661	33550728	chr21:33550661-33550728	3	+	33550661	33550661	5263520	1	67,	0,
#Partially deleted in new
chr21	33552247	33577481	chr21:33552247-33577481	0	+	33552247	33576576	789624	10	3144,161,147,189,111,117,148,72,116,1064,	0,4908,6982,7339,14909,16723,21060,23348,23530,24170,
#Partially deleted in new
chr21	33555048	33567467	chr21:33555048-33567467	0	+	33555048	33567348	789624	5	343,161,147,189,311,	0,2107,4181,4538,12108,
#Partially deleted in new
chr21	33559541	33578363	chr21:33559541-33578363	0	-	33578306	33578363	789624	4	166,214,83,65,	0,1199,13748,18757,
#Partially deleted in new
chr21	33567159	33570198	chr21:33567159-33570198	0	+	33567159	33569629	789624	4	108,117,355,104,	0,1811,2416,2935,
#Partially deleted in new
chr21	33567178	33569283	chr21:33567178-33569283	0	+	33567178	33567178	8553170	2	89,313,	0,1792,
#Partially deleted in new
chr21	33567184	33576513	chr21:33567184-33576513	0	+	33567184	33573320	789624	7	83,117,80,148,72,116,149,	0,1786,5366,6123,8411,8593,9180,
#Partially deleted in new
chr21	33569775	33576484	chr21:33569775-33576484	0	+	33569775	33569775	8553170	7	155,38,80,148,72,116,67,	0,1975,2775,3532,5820,6002,6642,
#Partially deleted in new
chr21	33571734	33576469	chr21:33571734-33576469	0	+	33571734	33571734	8553170	6	54,80,148,72,116,105,	0,816,1573,3861,4043,4630,
#Partially deleted in new
chr21	33571734	33576447	chr21:33571734-33576447	0	+	33571734	33571734	8553170	6	54,80,148,72,116,30,	0,816,1573,3861,4043,4683,
#Partially deleted in new
chr21	33571868	33576764	chr21:33571868-33576764	0	+	33571868	33571868	8553170	6	35,80,148,72,116,347,	0,682,1439,3727,3909,4549,
#Partially deleted in new
chr21	33572212	33577481	chr21:33572212-33577481	0	+	33572212	33572212	8553170	5	418,148,72,116,1064,	0,1095,3383,3565,4205,
#Partially deleted in new
chr21	33572526	33576881	chr21:33572526-33576881	0	+	33572526	33572526	8553170	5	104,148,72,116,517,	0,781,3069,3251,3838,
#Partially deleted in new
chr21	33573024	33576516	chr21:33573024-33576516	0	+	33573024	33573024	8553170	4	431,72,116,152,	0,2571,2753,3340,
#Partially deleted in new
chr21	33573213	33576982	chr21:33573213-33576982	0	+	33573213	33573213	8553170	4	242,72,116,565,	0,2382,2564,3204,
#Partially deleted in new
chr21	33575476	33588670	chr21:33575476-33588670	1	-	33578306	33588641	789624	11	332,146,213,199,105,82,179,137,204,81,350,	0,2822,3873,5825,6474,6688,8011,9113,10501,12045,12844,
#Partially deleted in new
chr21	33577535	33588646	chr21:33577535-33588646	1	-	33578335	33588641	789624	10	909,68,199,105,82,179,179,204,81,326,	0,1814,3766,4415,4629,5952,7054,8442,9986,10785,
#Partially deleted in new
chr21	33577560	33588646	chr21:33577560-33588646	0	-	33583639	33588641	789624	9	884,213,199,105,82,179,204,81,326,	0,1789,3741,4390,4604,5927,8417,9961,10760,
#Partially deleted in new
chr21	33577904	33588708	chr21:33577904-33588708	3	-	33578306	33588641	789624	10	540,213,199,105,82,179,179,204,81,388,	0,1445,3397,4046,4260,5583,6685,8073,9617,10416,
#Partially deleted in new
chr21	33577916	33588670	chr21:33577916-33588670	0	-	33586051	33588641	789624	9	528,213,199,105,82,179,83,81,350,	0,1433,3385,4034,4248,6673,8061,9605,10404,
#Partially deleted in new
chr21	33577923	33579614	chr21:33577923-33579614	0	-	33577923	33577923	8553170	2	521,265,	0,1426,
#Partially deleted in new
chr21	33577941	33587602	chr21:33577941-33587602	0	-	33582239	33587602	789624	8	503,213,199,105,82,179,204,81,	0,1408,3360,4009,4223,6648,8036,9580,
#Partially deleted in new
chr21	33577941	33587602	chr21:33577941-33587602	0	-	33579549	33587602	789624	5	503,213,179,204,81,	0,1408,6648,8036,9580,
#Partially deleted in new
chr21	33578200	33588634	chr21:33578200-33588634	0	-	33578306	33588634	789624	9	244,213,199,105,82,179,179,204,314,	0,1149,3101,3750,3964,5287,6389,7777,10120,
#Partially deleted in new
chr21	33578241	33588706	chr21:33578241-33588706	1	-	33578306	33588641	789624	9	203,199,105,82,179,179,204,81,386,	0,3060,3709,3923,5246,6348,7736,9280,10079,
#Partially deleted in new
chr21	33579523	33586158	chr21:33579523-33586158	0	-	33579523	33586158	789624	5	39,199,105,179,181,	0,1778,2427,5066,6454,
#Deleted in new
chr21	33581174	33582054	chr21:33581174-33582054	0	-	33581174	33581174	8553170	2	326,104,	0,776,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr21	33584686	33931607	chr21:33584686-33931607	3	-	33584686	33915763	789624	8	82,204,113,130,111,51,250,137,	0,1291,322654,324395,327602,329763,331041,346784,
#Partially deleted in new
chr21	33589340	33641760	chr21:33589340-33641760	3	-	33589821	33631551	789624	13	581,46,106,122,99,112,134,69,45,73,78,72,80,	0,1821,6390,7939,9809,12893,14063,24197,27365,32655,35342,42145,52340,
#Partially deleted in new
chr21	33589385	33641918	chr21:33589385-33641918	1	-	33589821	33631551	789624	12	536,46,106,122,99,112,134,69,73,78,72,238,	0,1776,6345,7894,9764,12848,14018,24152,32610,35297,42100,52295,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	33589460	33591718	chr21:33589460-33591718	0	-	33589460	33589460	8553170	2	461,557,	0,1701,
#Partially deleted in new
chr21	33589466	33641747	chr21:33589466-33641747	1	-	33589906	33631551	789624	13	455,50,106,122,99,112,134,69,45,73,78,72,67,	0,1695,6264,7813,9683,12767,13937,24071,27239,32529,35216,42019,52214,
#Partially deleted in new
chr21	33589467	33613560	chr21:33589467-33613560	0	-	33599265	33613560	789624	9	454,210,259,106,122,136,112,134,23,	0,1694,5888,6263,7812,9682,12766,13936,24070,
#Partially deleted in new
chr21	33589544	33597401	chr21:33589544-33597401	0	-	33589744	33597401	789624	4	261,46,106,122,	0,1617,6186,7735,
#Partially deleted in new
chr21	33589559	33597400	chr21:33589559-33597400	0	-	33589559	33589559	8553170	4	362,67,106,121,	0,1602,6171,7720,
#Partially deleted in new
chr21	33589616	33641730	chr21:33589616-33641730	1	-	33589790	33631551	789624	7	305,112,134,73,78,72,50,	0,12617,13787,32379,35066,41869,52064,
#Partially deleted in new
chr21	33589768	33602265	chr21:33589768-33602265	0	-	33599265	33602265	789624	6	153,46,106,122,136,32,	0,1393,5962,7511,9381,12465,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr21	33594506	33641759	chr21:33594506-33641759	1	-	33595612	33641244	789624	13	1108,106,122,99,112,134,69,45,73,78,72,127,79,	0,1224,2773,4643,7727,8897,19031,22199,27489,30176,36979,46672,47174,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr21	33594642	33641741	chr21:33594642-33641741	0	-	33599265	33631551	789624	11	972,106,122,136,112,134,69,73,78,72,61,	0,1088,2637,4507,7591,8761,18895,27353,30040,36843,47038,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr21	33594661	33642338	chr21:33594661-33642338	0	-	33599265	33631551	789624	12	953,106,122,136,112,134,69,45,73,78,72,658,	0,1069,2618,4488,7572,8742,18876,22044,27334,30021,36824,47019,
#Partially deleted in new
chr21	33595130	33622042	chr21:33595130-33622042	0	-	33595432	33622042	789624	8	398,122,99,112,134,69,45,47,	0,2149,4019,7103,8273,18407,21575,26865,
#Partially deleted in new
chr21	33595336	33602256	chr21:33595336-33602256	0	-	33595336	33595336	8553170	4	278,106,99,23,	0,394,3813,6897,
#Partially deleted in new
chr21	33596061	33603448	chr21:33596061-33603448	0	-	33596175	33603448	789624	4	152,99,112,45,	0,3088,6172,7342,
#Partially deleted in new
chr21	33599195	33641745	chr21:33599195-33641745	0	-	33599195	33622056	789624	8	53,112,134,69,45,73,78,65,	0,3038,4208,14342,17510,22800,25487,42485,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	33602331	33617176	chr21:33602331-33617176	0	-	33602331	33602331	8553170	4	14,134,69,471,	0,1072,11206,14374,
#Partially deleted in new
chr21	33602332	33641730	chr21:33602332-33641730	0	-	33602332	33622056	789624	8	13,134,69,45,73,78,42,50,	0,1071,11205,14373,19663,22350,29153,39348,
#Partially deleted in new
chr21	33603155	33641720	chr21:33603155-33641720	0	-	33603155	33603155	8553170	7	382,69,45,73,78,72,40,	0,10382,13550,18840,21527,28330,38525,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	33616286	33641722	chr21:33616286-33641722	1	-	33616523	33631551	789624	6	317,45,73,78,72,42,	0,419,5709,8396,15199,25394,
#Partially deleted in new
chr21	33631492	33643926	chr21:33631492-33643926	0	-	33631492	33631551	789624	2	65,555,	0,11879,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	33639744	33641721	chr21:33639744-33641721	1	-	33640179	33641244	789624	3	444,127,41,	0,1434,1936,
#Partially deleted in new
chr21	33642399	33837018	chr21:33642399-33837018	1	+	33718828	33836988	0	29	314,60,93,64,161,69,97,101,64,138,116,263,150,141,88,140,128,230,122,248,160,206,83,167,46,122,118,192,32,	0,76397,78778,80188,92644,107854,109410,112897,119523,123475,125313,129661,132329,132568,139061,139594,151941,154979,157408,168575,171513,175867,176841,181087,184418,187224,191907,194041,194587,
#Partially deleted in new
chr21	33642451	33735204	chr21:33642451-33735204	0	+	33718828	33735204	789624	7	262,62,125,60,93,64,161,	0,46870,73979,76345,78726,80136,92592,
#Boundary problem: need 40, got 0, diff 40, mapped 0.0
chr21	33642457	33899861	chr21:33642457-33899861	3	+	33718828	33888300	0	40	256,60,93,64,161,180,97,101,64,138,116,263,150,141,88,140,128,230,122,15,248,160,206,83,167,46,122,118,192,122,107,184,99,168,213,122,83,84,174,11710,	0,76339,78720,80130,92586,107685,109352,112839,119465,123417,125255,129603,132271,132510,139003,139536,151883,154921,157350,159972,168517,171455,175809,176783,181029,184360,187166,191849,193983,214278,216228,222693,224775,232896,239785,241092,242583,242981,243829,245694,
#Partially deleted in new
chr21	33642477	33889305	chr21:33642477-33889305	1	+	33718828	33819273	789624	38	236,60,93,64,161,69,97,101,64,138,116,263,150,141,88,140,128,230,122,248,160,83,167,46,122,118,192,122,107,184,99,168,213,122,83,84,174,1154,	0,76319,78700,80110,92566,107776,109332,112819,119445,123397,125235,129583,132251,132490,138983,139516,151863,154901,157330,168497,171435,176763,181009,184340,187146,191829,193963,214258,216208,222673,224755,232876,239765,241072,242563,242961,243809,245674,
#Partially deleted in new
chr21	33642477	33838494	chr21:33642477-33838494	1	+	33718828	33836988	0	30	236,60,93,64,161,180,97,101,64,138,116,263,150,141,88,140,128,230,122,15,248,160,206,83,167,46,122,118,192,1508,	0,76319,78700,80110,92566,107665,109332,112819,119445,123397,125235,129583,132251,132490,138983,139516,151863,154901,157330,159952,168497,171435,175789,176763,181009,184340,187146,191829,193963,194509,
#Partially deleted in new
chr21	33642482	33888608	chr21:33642482-33888608	1	+	33718828	33888300	0	39	231,60,93,64,161,180,97,101,64,138,116,263,150,141,88,140,128,230,122,248,160,206,83,167,46,122,118,192,122,107,184,99,168,213,122,83,84,174,457,	0,76314,78695,80105,92561,107660,109327,112814,119440,123392,125230,129578,132246,132485,138978,139511,151858,154896,157325,168492,171430,175784,176758,181004,184335,187141,191824,193958,214253,216203,222668,224750,232871,239760,241067,242558,242956,243804,245669,
#Partially deleted in new
chr21	33642495	33838498	chr21:33642495-33838498	1	+	33718828	33836988	0	29	218,60,93,64,161,180,97,101,64,138,116,263,150,141,88,140,128,230,122,248,160,206,83,167,46,122,118,192,1512,	0,76301,78682,80092,92548,107647,109314,112801,119427,123379,125217,129565,132233,132472,138965,139498,151845,154883,157312,168479,171417,175771,176745,180991,184322,187128,191811,193945,194491,
#Partially deleted in new
chr21	33642497	33838496	chr21:33642497-33838496	1	+	33718828	33836988	0	27	216,60,93,64,161,180,97,101,64,138,116,263,150,141,88,140,128,230,122,248,160,206,83,122,118,192,1510,	0,76299,78680,80090,92546,107645,109312,112799,119425,123377,125215,129563,132231,132470,138963,139496,151843,154881,157310,168477,171415,175769,176743,187126,191809,193943,194489,
#Partially deleted in new
chr21	33642497	33837293	chr21:33642497-33837293	1	+	33718828	33836988	789624	28	216,60,93,64,161,180,97,101,64,138,116,263,150,141,88,140,128,230,122,15,248,160,206,83,122,118,192,307,	0,76299,78680,80090,92546,107645,109312,112799,119425,123377,125215,129563,132231,132470,138963,139496,151843,154881,157310,159932,168477,171415,175769,176743,187126,191809,193943,194489,
#Partially deleted in new
chr21	33642541	33735093	chr21:33642541-33735093	0	+	33718828	33735093	789624	6	172,62,60,93,64,50,	0,46780,76255,78636,80046,92502,
#Partially deleted in new
chr21	33718796	33772282	chr21:33718796-33772282	0	+	33718828	33772282	789624	10	60,93,64,161,97,101,64,138,116,222,	0,2381,3791,16247,33013,36500,43126,47078,48916,53264,
#Partially deleted in new
chr21	33718809	33817614	chr21:33718809-33817614	1	+	33718828	33817581	0	21	47,93,64,161,180,97,101,64,138,116,263,150,141,88,140,128,230,122,248,160,384,	0,2368,3778,16234,31333,33000,36487,43113,47065,48903,53251,55919,56158,62651,63184,75531,78569,80998,92165,95103,98421,
#Deleted in new
chr21	33735040	33735626	chr21:33735040-33735626	0	+	33735040	33735322	789624	2	164,321,	0,265,
#Partially deleted in new
chr21	33750106	33836635	chr21:33750106-33836635	1	+	33750144	33772058	789624	20	216,97,101,64,138,116,285,150,141,88,140,128,230,122,248,160,206,83,118,195,	0,1703,5190,11816,15768,17606,21932,24622,24861,31354,31887,44234,47272,49701,60868,63806,68160,69134,84200,86334,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	33754182	33772300	chr21:33754182-33772300	0	+	33754182	33754182	8553170	7	40,101,287,64,138,116,240,	0,1114,2604,7740,11692,13530,17878,
#Deleted in new
chr21	33774362	33775079	chr21:33774362-33775079	0	+	33774362	33774362	8553170	2	516,112,	0,605,
#Partially deleted in new
chr21	33797553	33817416	chr21:33797553-33817416	0	+	33797553	33811023	789624	6	55,122,8,248,160,186,	0,2254,4883,13421,16359,19677,
#Partially deleted in new
chr21	33799922	33817736	chr21:33799922-33817736	0	+	33799922	33817581	789624	5	7,15,248,160,506,	0,2507,11052,13990,17308,
#Partially deleted in new
chr21	33811203	33814507	chr21:33811203-33814507	0	+	33811203	33811203	8553170	2	19,595,	0,2709,
#Partially deleted in new
chr21	33818025	33829029	chr21:33818025-33829029	0	+	33818025	33818025	8553170	5	447,83,167,46,62,	0,1215,5461,8792,10942,
#Partially deleted in new
chr21	33818382	33834396	chr21:33818382-33834396	0	+	33818382	33828980	789624	6	90,83,46,83,122,90,	0,858,8435,10585,11241,15924,
#Partially deleted in new
chr21	33818451	33829686	chr21:33818451-33829686	0	+	33818451	33818451	8553170	4	21,83,46,63,	0,789,8366,11172,
#Partially deleted in new
chr21	33829005	33837038	chr21:33829005-33837038	0	+	33829005	33829005	8553170	4	740,118,192,52,	0,5301,7435,7981,
#Partially deleted in new
chr21	33829005	33837038	chr21:33829005-33837038	0	+	33829005	33829005	8553170	5	45,122,118,192,52,	0,618,5301,7435,7981,
#Partially deleted in new
chr21	33829005	33856793	chr21:33829005-33856793	0	+	33829005	33829005	8553170	2	740,58,	0,27730,
#Partially deleted in new
chr21	33829005	33837038	chr21:33829005-33837038	0	+	33829005	33829005	8553170	5	163,122,118,192,52,	0,618,5301,7435,7981,
#Partially deleted in new
chr21	33829005	33856793	chr21:33829005-33856793	0	+	33829005	33829005	8553170	4	740,118,192,58,	0,5301,7435,27730,
#Partially deleted in new
chr21	33829005	33856793	chr21:33829005-33856793	0	+	33829005	33829005	8553170	5	45,122,118,192,58,	0,618,5301,7435,27730,
#Partially deleted in new
chr21	33858696	33886354	chr21:33858696-33886354	0	+	33858696	33886354	789624	8	96,184,99,213,122,83,84,68,	0,6454,8536,23546,24853,26344,26742,27590,
#Partially deleted in new
chr21	33875357	33886377	chr21:33875357-33886377	0	+	33875357	33885076	789624	4	164,83,84,91,	0,9683,10081,10929,
#Partially deleted in new
chr21	33875359	33886354	chr21:33875359-33886354	0	+	33875359	33886354	789624	5	162,122,83,84,68,	0,8190,9681,10079,10927,
#Partially deleted in new
chr21	33903452	33915980	chr21:33903452-33915980	3	-	33903525	33915763	789624	7	187,87,113,130,111,51,253,	0,482,3888,5629,8836,10997,12275,
#Partially deleted in new
chr21	33903452	33915761	chr21:33903452-33915761	0	-	33907426	33915761	789624	6	187,87,113,111,51,34,	0,482,3888,8836,10997,12275,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	33903452	33915768	chr21:33903452-33915768	0	-	33903452	33903452	8553170	6	187,87,1005,130,111,1319,	0,482,2996,5629,8836,10997,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	33903455	33907412	chr21:33903455-33907412	0	-	33906743	33907412	789624	5	184,87,52,67,72,	0,479,2993,3272,3885,
#Partially deleted in new
chr21	33903455	33909095	chr21:33903455-33909095	0	-	33903611	33909095	789624	4	201,87,113,14,	0,479,3885,5626,
#Partially deleted in new
chr21	33903456	33907416	chr21:33903456-33907416	0	-	33906818	33907416	789624	4	183,87,96,76,	0,478,3269,3884,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	33908813	33915753	chr21:33908813-33915753	0	-	33908813	33908813	8553170	4	398,111,51,26,	0,3475,5636,6914,
#Partially deleted in new
chr21	33912366	33915724	chr21:33912366-33915724	0	-	33912366	33912366	8553170	3	33,51,73,	0,2083,3285,
#Partially deleted in new
chr21	33912366	33915724	chr21:33912366-33915724	0	-	33912366	33912366	8553170	3	33,51,589,	0,2083,2769,
#Partially deleted in new
chr21	33912377	33915779	chr21:33912377-33915779	0	-	33912377	33912377	8553170	3	22,51,396,	0,2072,3006,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	33915533	33969586	chr21:33915533-33969586	0	+	33915533	33915533	8553170	3	246,86,350,	0,30276,53703,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	33915547	33969358	chr21:33915547-33969358	1	+	33915547	33915547	8553170	6	117,54,121,112,86,122,	0,1465,7790,27486,30262,53689,
#Partially deleted in new
chr21	33915549	33969598	chr21:33915549-33969598	1	+	33915549	33915549	8553170	3	115,237,362,	0,51732,53687,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	33915877	33923479	chr21:33915877-33923479	0	+	33915877	33915877	8553170	2	54,142,	0,7460,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	33918994	33919338	chr21:33918994-33919338	3	-	33918994	33918994	8553170	1	344,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	33923432	33943130	chr21:33923432-33943130	1	+	33923432	33923432	8553170	3	26,415,97,	0,464,19601,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	33931159	33977691	chr21:33931159-33977691	1	+	33931159	33931159	789624	3	583,86,8455,	0,14650,38077,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	33931162	33938372	chr21:33931162-33938372	0	+	33931162	33931162	789624	2	580,148,	0,7062,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	33931213	33971186	chr21:33931213-33971186	0	+	33931213	33931213	789624	3	54,86,1950,	0,14596,38023,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	33939407	33969569	chr21:33939407-33969569	0	+	33939407	33939407	8553170	3	206,86,333,	0,6402,29829,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	33943555	33969598	chr21:33943555-33969598	0	+	33943555	33943555	8553170	3	41,86,362,	0,2254,25681,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	33943624	33969598	chr21:33943624-33969598	2	+	33943624	33943624	8553170	3	252,86,362,	0,2185,25612,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	33945809	33951297	chr21:33945809-33951297	0	+	33945809	33945809	8553170	2	86,174,	0,5314,
#Partially deleted in new
chr21	33948725	33969590	chr21:33948725-33969590	1	+	33948725	33948725	8553170	3	55,231,354,	0,2398,20511,
#Partially deleted in new
chr21	33948787	33969598	chr21:33948787-33969598	1	+	33948787	33948787	8553170	3	505,245,358,	0,2322,20453,
#Partially deleted in new
chr21	33948925	33963958	chr21:33948925-33963958	0	+	33948925	33948925	8553170	2	367,1894,	0,13139,
#Partially deleted in new
chr21	33962228	33969594	chr21:33962228-33969594	0	+	33962228	33962228	8553170	2	421,358,	0,7008,
#Partially deleted in new
chr21	33967023	33969568	chr21:33967023-33969568	0	+	33967023	33967023	8553170	2	495,332,	0,2213,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	33967100	33968573	chr21:33967100-33968573	3	-	33967100	33967100	8553170	2	250,341,	0,1132,
#Partially deleted in new
chr21	33969518	33977104	chr21:33969518-33977104	1	+	33969518	33969518	8553170	3	124,167,377,	0,6866,7209,
#Partially deleted in new
chr21	34073223	34143034	chr21:34073223-34143034	0	+	34073223	34073223	8553170	5	45,74,23,140,627,	0,29611,30273,52117,69184,
#Partially deleted in new
chr21	34073522	34143034	chr21:34073522-34143034	3	+	34073700	34142600	0	3	223,140,627,	0,51818,68885,
#Partially deleted in new
chr21	34073548	34143034	chr21:34073548-34143034	0	+	34073548	34073548	8553170	5	197,74,23,140,627,	0,29286,29948,51792,68859,
#Partially deleted in new
chr21	34073569	34106262	chr21:34073569-34106262	3	+	34095198	34097355	789624	2	176,11400,	0,21293,
#Partially deleted in new
chr21	34073591	34360033	chr21:34073591-34360033	3	+	34073591	34073591	8553170	6	154,140,41,102,76,128,	0,51749,141908,189228,220089,286314,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	34122173	34143034	chr21:34122173-34143034	0	+	34122173	34122173	8553170	2	3307,627,	0,20234,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	34123952	34143034	chr21:34123952-34143034	0	+	34123952	34123952	8553170	3	1189,140,627,	0,1388,18455,
#Deleted in new
chr21	34135431	34136071	chr21:34135431-34136071	7	-	34135431	34135431	16724991	1	640,	0,
#Partially deleted in new
chr21	34157723	34188917	chr21:34157723-34188917	0	+	34157723	34157723	8553170	3	129,446,150,	0,30493,31044,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	34180184	34190244	chr21:34180184-34190244	3	+	34180184	34180184	8553170	2	609,1477,	0,8583,
#Partially deleted in new
chr21	34180676	34183245	chr21:34180676-34183245	0	+	34180676	34180676	789624	2	117,538,	0,2031,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	34180714	34189066	chr21:34180714-34189066	1	+	34180714	34180714	8553170	3	79,485,299,	0,1993,8053,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	34180728	34189183	chr21:34180728-34189183	1	+	34180728	34180728	8553170	3	65,411,416,	0,1979,8039,
#Partially deleted in new
chr21	34180743	34188562	chr21:34180743-34188562	0	+	34180743	34180743	8553170	2	50,346,	0,7473,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	34180759	34189197	chr21:34180759-34189197	1	+	34180759	34180759	8553170	3	34,446,430,	0,7457,8008,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	34185865	34188877	chr21:34185865-34188877	0	+	34185865	34185865	8553170	3	81,446,110,	0,2351,2902,
#Partially deleted in new
chr21	34205054	34325034	chr21:34205054-34325034	3	+	34205054	34205054	8553170	5	270,41,119,76,299,	0,10445,57765,88626,119681,
#Partially deleted in new
chr21	34364023	34371389	chr21:34364023-34371389	3	+	34370478	34370850	0	2	128,923,	0,6443,
#Partially deleted in new
chr21	34370801	34375348	chr21:34370801-34375348	3	-	34370801	34370801	8553170	2	359,112,	0,4435,
#Partially deleted in new
chr21	34375479	34402777	chr21:34375479-34402777	0	+	34375479	34375479	8553170	5	88,89,167,189,687,	0,3948,9998,24231,26611,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	34375499	34389154	chr21:34375499-34389154	3	+	34379504	34385642	789624	4	68,89,167,526,	0,3928,9978,13129,
#Partially deleted in new
chr21	34375499	34402777	chr21:34375499-34402777	1	+	34379504	34402096	8553170	4	68,89,189,687,	0,3928,24211,26591,
#Partially deleted in new
chr21	34375508	34400175	chr21:34375508-34400175	0	+	34375508	34375508	8553170	4	59,89,167,465,	0,3919,9969,24202,
#Partially deleted in new
chr21	34375560	34407866	chr21:34375560-34407866	0	+	34375560	34375560	8553170	6	7,89,167,189,390,187,	0,3867,9917,24150,29162,32119,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	34375567	34386633	chr21:34375567-34386633	0	+	34375567	34375567	8553170	3	612,89,1156,	0,3860,9910,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	34375603	34389153	chr21:34375603-34389153	1	+	34379504	34385642	789624	4	293,89,167,525,	0,3824,9874,13025,
#Deleted in new
chr21	34400316	34401072	chr21:34400316-34401072	3	-	34400316	34401072	789624	1	756,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	34412199	34412587	chr21:34412199-34412587	3	+	34412199	34412199	8553170	1	388,	0,
#Partially deleted in new
chr21	34418714	34423966	chr21:34418714-34423966	3	-	34419217	34423839	789624	2	916,134,	0,5118,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	34425507	34426017	chr21:34425507-34426017	3	+	34425507	34425507	8553170	1	510,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	34446687	34511339	chr21:34446687-34511339	3	-	34449244	34449634	0	3	2997,111,239,	0,11966,64413,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	34446687	34459604	chr21:34446687-34459604	1	-	34449244	34449634	0	3	2997,111,76,	0,11966,12841,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	34446687	34511325	chr21:34446687-34511325	1	-	34449244	34449634	0	2	2997,225,	0,64413,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	34446687	34459938	chr21:34446687-34459938	1	-	34449244	34449634	0	3	2997,111,40,	0,11966,13211,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	34446689	34459604	chr21:34446689-34459604	1	-	34449244	34449634	0	3	2995,83,76,	0,11964,12839,
#Partially deleted in new
chr21	34449055	34512275	chr21:34449055-34512275	1	-	34449244	34449634	0	4	629,111,215,249,	0,9598,62045,62971,
#Partially deleted in new
chr21	34449244	34511243	chr21:34449244-34511243	1	-	34449244	34449634	0	3	440,83,143,	0,9409,61856,
#Partially deleted in new
chr21	34449244	34455741	chr21:34449244-34455741	1	-	34449244	34449634	0	2	440,356,	0,6141,
#Deleted in new
chr21	34456109	34456237	chr21:34456109-34456237	3	-	34456109	34456109	8553170	1	128,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	34509455	34512207	chr21:34509455-34512207	0	-	34509455	34509455	8553170	2	1860,181,	0,2571,
#Partially deleted in new
chr21	34513141	34521583	chr21:34513141-34521583	0	-	34513141	34513141	8553170	2	215,85,	0,8357,
#Partially deleted in new
chr21	34516444	34525467	chr21:34516444-34525467	1	-	34518083	34525414	789624	4	1812,160,174,380,	0,5054,7092,8643,
#Partially deleted in new
chr21	34516444	34614446	chr21:34516444-34614446	1	-	34518083	34523557	789624	4	1812,160,174,169,	0,5054,7092,97833,
#Partially deleted in new
chr21	34516444	34524637	chr21:34516444-34524637	1	-	34518083	34523557	789624	4	1812,160,174,111,	0,5054,7092,8082,
#Partially deleted in new
chr21	34516483	34615142	chr21:34516483-34615142	1	-	34518083	34615011	789624	4	1773,160,174,383,	0,5015,7053,98276,
#Partially deleted in new
chr21	34516483	34526963	chr21:34516483-34526963	1	-	34518083	34526749	789624	4	1773,160,174,301,	0,5015,7053,10179,
#Partially deleted in new
chr21	34516483	34613843	chr21:34516483-34613843	3	-	34518083	34613795	789624	4	1773,160,174,57,	0,5015,7053,97303,
#Partially deleted in new
chr21	34516483	34526850	chr21:34516483-34526850	1	-	34518083	34525309	789624	5	1773,160,174,521,188,	0,5015,7053,8604,10179,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	34516483	34524289	chr21:34516483-34524289	1	-	34518083	34523557	789624	3	1773,160,753,	0,5015,7053,
#Partially deleted in new
chr21	34516483	34560179	chr21:34516483-34560179	1	-	34518083	34523557	789624	4	1773,160,174,413,	0,5015,7053,43283,
#Partially deleted in new
chr21	34516483	34614446	chr21:34516483-34614446	0	-	34516483	34516483	8553170	4	1773,160,174,169,	0,5015,7053,97794,
#Partially deleted in new
chr21	34521059	34526824	chr21:34521059-34526824	1	-	34521301	34526749	789624	3	599,174,162,	0,2477,5603,
#Deleted in new
chr21	34521070	34523117	chr21:34521070-34523117	0	-	34521070	34521070	8553170	1	2047,	0,
#Partially deleted in new
chr21	34523545	34615083	chr21:34523545-34615083	0	-	34523545	34523545	8553170	3	165,197,324,	0,35677,91214,
#Partially deleted in new
chr21	34669388	34718227	chr21:34669388-34718227	3	+	34669388	34716482	789624	6	1374,110,126,107,182,1907,	0,37891,38555,39311,39968,46932,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	34669388	34718227	chr21:34669388-34718227	1	+	34669388	34716482	789624	7	1374,54,110,126,107,182,1907,	0,36638,37891,38555,39311,39968,46932,
#Partially deleted in new
chr21	34723806	34737181	chr21:34723806-34737181	3	-	34723806	34723806	789624	6	147,151,171,81,71,72,	0,239,9102,10154,10879,13303,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	34745756	34784886	chr21:34745756-34784886	3	+	34745756	34745756	789624	3	260,66,2306,	0,36368,36824,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	34745836	34748367	chr21:34745836-34748367	0	+	34745836	34745836	789624	2	180,587,	0,1944,
#Partially deleted in new
chr21	34787800	35049344	chr21:34787800-35049344	3	-	34792134	35048899	0	8	4810,162,192,105,157,254,39,503,	0,11500,46609,71673,92756,99042,105124,261041,
#Partially deleted in new
chr21	34787800	34888690	chr21:34787800-34888690	1	-	34792134	34887112	0	6	4810,162,192,105,157,1848,	0,11500,46609,71673,92756,99042,
#Partially deleted in new
chr21	34787800	35049298	chr21:34787800-35049298	1	-	34792134	35048899	0	9	4810,162,192,105,157,254,39,117,131,	0,11500,46609,71673,92756,99042,105124,261041,261367,
#Partially deleted in new
chr21	34791754	35049288	chr21:34791754-35049288	0	-	34880654	35048899	789624	7	856,162,192,105,157,117,121,	0,7546,42655,67719,88802,257087,257413,
#Partially deleted in new
chr21	34791785	34887183	chr21:34791785-34887183	1	-	34792134	34887112	789624	5	825,162,105,157,341,	0,7515,67688,88771,95057,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	34821278	34888690	chr21:34821278-34888690	1	-	34821667	34887112	0	5	418,192,105,157,1848,	0,13131,38195,59278,65564,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	34821278	34829970	chr21:34821278-34829970	0	-	34821278	34821278	8553170	2	418,119,	0,8573,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	34832960	34856447	chr21:34832960-34856447	0	-	34832960	34832960	8553170	2	1641,149,	0,23338,
#Partially deleted in new
chr21	34834409	34889790	chr21:34834409-34889790	0	-	34834409	34889737	789624	5	192,105,157,254,114,	0,25064,46147,52433,55267,
#Partially deleted in new
chr21	34856288	34859578	chr21:34856288-34859578	0	-	34856288	34856288	8553170	2	159,105,	0,3185,
#Partially deleted in new
chr21	34880605	35049298	chr21:34880605-35049298	0	-	34880605	35048899	789624	4	108,254,117,131,	0,6237,168236,168562,
#Partially deleted in new
chr21	34892924	35049270	chr21:34892924-35049270	0	-	34892924	35048899	789624	3	39,117,190,	0,155917,156156,
#Deleted in new
chr21	35064715	35065072	chr21:35064715-35065072	0	-	35064715	35064715	8553170	2	114,137,	0,220,
#Partially deleted in new
chr21	35136637	35139222	chr21:35136637-35139222	3	+	35136637	35136637	8553170	2	212,486,	0,2099,
#Partially deleted in new
chr21	35372506	35580760	chr21:35372506-35580760	0	-	35372506	35372506	789624	3	287,65,101,	0,89454,208153,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	35435660	35465329	chr21:35435660-35465329	0	-	35435660	35435660	8553170	3	3411,65,146,	0,26300,29523,
#Deleted in new
chr21	35472094	35472432	chr21:35472094-35472432	7	-	35472094	35472094	16724991	1	338,	0,
#Deleted in new
chr21	35599731	35600022	chr21:35599731-35600022	7	-	35599731	35599731	16724991	1	291,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	35713138	35732942	chr21:35713138-35732942	3	-	35713138	35713138	8553170	2	309,40,	0,19764,
#Deleted in new
chr21	35720714	35720808	chr21:35720714-35720808	3	+	35720714	35720714	5263520	1	94,	0,
#Deleted in new
chr21	35724746	35725100	chr21:35724746-35725100	7	-	35724746	35724746	16724991	1	354,	0,
#Deleted in new
chr21	35887194	35887807	chr21:35887194-35887807	7	+	35887194	35887194	16724991	1	613,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	36005337	36007838	chr21:36005337-36007838	3	+	36005337	36005337	789624	2	528,520,	0,1981,
#Deleted in new
chr21	36016078	36016546	chr21:36016078-36016546	7	-	36016078	36016078	16724991	1	468,	0,
#Partially deleted in new
chr21	36034540	36060550	chr21:36034540-36060550	3	-	36036116	36058888	789624	12	1420,167,124,81,82,175,430,89,38,96,109,204,	0,1544,3609,6034,7266,9241,11041,13767,19042,22568,24275,25806,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr21	36034540	36060526	chr21:36034540-36060526	1	-	36036116	36057384	789624	12	1711,124,81,82,175,430,89,38,96,94,158,180,	0,3609,6034,7266,9241,11041,13767,19042,22568,22843,24275,25806,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr21	36034540	36060261	chr21:36034540-36060261	1	-	36036116	36058888	789624	10	1711,124,81,82,175,430,89,38,96,1446,	0,3609,6034,7266,9241,11041,13767,19042,22568,24275,
#Partially deleted in new
chr21	36034540	36060385	chr21:36034540-36060385	0	-	36034540	36034540	789624	11	1420,167,124,81,82,175,430,38,96,109,39,	0,1544,3609,6034,7266,9241,11041,19042,22568,24275,25806,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	36034541	36043373	chr21:36034541-36043373	0	-	36034541	36034541	8553170	5	1419,167,124,81,1567,	0,1543,3608,6033,7265,
#Partially deleted in new
chr21	36036084	36043648	chr21:36036084-36043648	0	-	36036084	36036084	8553170	5	167,124,81,82,248,	0,2065,4490,5722,7316,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr21	36043685	36079389	chr21:36043685-36079389	1	-	36043758	36057384	789624	8	271,430,89,38,96,94,109,85,	0,1896,4622,9897,13423,13698,15130,35619,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr21	36043685	36060313	chr21:36043685-36060313	1	-	36043758	36057384	789624	8	271,430,89,38,96,94,158,32,	0,1896,4622,9897,13423,13698,15130,16596,
#Partially deleted in new
chr21	36043685	36060364	chr21:36043685-36060364	1	-	36043758	36058888	789624	7	271,430,89,38,96,158,83,	0,1896,4622,9897,13423,15130,16596,
#Partially deleted in new
chr21	36043697	36060245	chr21:36043697-36060245	1	-	36043758	36058888	789624	7	259,430,89,38,96,109,139,	0,1884,4610,9885,13411,15118,16409,
#Partially deleted in new
chr21	36045613	36060363	chr21:36045613-36060363	0	-	36045613	36058888	789624	6	398,89,38,96,158,17,	0,2694,7969,11495,13202,14733,
#Partially deleted in new
chr21	36045630	36060313	chr21:36045630-36060313	0	-	36045630	36058888	789624	6	381,89,38,96,109,32,	0,2677,7952,11478,13185,14651,
#Partially deleted in new
chr21	36045782	36057301	chr21:36045782-36057301	0	-	36045782	36045782	8553170	4	229,89,38,193,	0,2525,7800,11326,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	36045863	36060526	chr21:36045863-36060526	0	-	36045863	36057384	789624	7	148,89,38,96,94,109,180,	0,2444,7719,11245,11520,12952,14483,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	36048321	36060300	chr21:36048321-36060300	0	-	36048321	36057384	789624	6	75,38,96,94,109,19,	0,5261,8787,9062,10494,11960,
#Deleted in new
chr21	36050213	36051377	chr21:36050213-36051377	7	+	36050213	36050213	16724991	1	1164,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	36052916	36057199	chr21:36052916-36057199	0	-	36052916	36052916	8553170	2	704,91,	0,4192,
#Partially deleted in new
chr21	36053588	36060242	chr21:36053588-36060242	0	-	36053588	36058888	789624	4	32,96,158,421,	0,3520,5227,6233,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	36066544	36066652	chr21:36066544-36066652	3	+	36066544	36066544	8553170	1	108,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	36069641	36126640	chr21:36069641-36126640	3	-	36069641	36069641	789624	4	844,87,136,154,	0,5239,28482,56845,
#Deleted in new
chr21	36069940	36073166	chr21:36069940-36073166	3	+	36070115	36072882	0	3	464,108,721,	0,1009,2505,
#Deleted in new
chr21	36069940	36071216	chr21:36069940-36071216	0	+	36069940	36069940	8553170	3	464,108,23,	0,1009,1253,
#Deleted in new
chr21	36069940	36073166	chr21:36069940-36073166	1	+	36070115	36071939	0	3	464,108,1352,	0,1009,1874,
#Deleted in new
chr21	36070014	36071583	chr21:36070014-36071583	1	+	36070115	36071197	789624	2	390,634,	0,935,
#Deleted in new
chr21	36070034	36072533	chr21:36070034-36072533	1	+	36070115	36072445	789624	3	370,108,360,	0,915,2139,
#Partially deleted in new
chr21	36074880	36075602	chr21:36074880-36075602	0	-	36074880	36074880	8553170	2	87,72,	0,650,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	36082858	36090414	chr21:36082858-36090414	3	+	36082858	36082858	8553170	2	41,307,	0,7249,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	36104880	36109690	chr21:36104880-36109690	3	+	36104880	36104880	789624	2	243,2093,	0,2717,
#Partially deleted in new
chr21	36130488	36131376	chr21:36130488-36131376	7	+	36130488	36130488	16724991	1	888,	0,
#Partially deleted in new
chr21	36131766	36156307	chr21:36131766-36156307	1	-	36131766	36131766	789624	3	1308,100,91,	0,14489,24450,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	36131785	36156295	chr21:36131785-36156295	1	-	36131785	36131785	789624	4	1289,75,100,79,	0,1901,14470,24431,
#Partially deleted in new
chr21	36132449	36133032	chr21:36132449-36133032	7	+	36132449	36132449	16724991	1	583,	0,
#Partially deleted in new
chr21	36132772	36156317	chr21:36132772-36156317	1	-	36132772	36132772	8553170	4	302,83,100,101,	0,4321,13483,23444,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	36132772	36156268	chr21:36132772-36156268	1	-	36132772	36132772	8553170	4	302,136,100,52,	0,4321,13483,23444,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	36132774	36156317	chr21:36132774-36156317	1	-	36132774	36132774	8553170	5	300,75,83,100,101,	0,912,4319,13481,23442,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	36132779	36137385	chr21:36132779-36137385	0	-	36132779	36132779	8553170	3	295,75,292,	0,907,4314,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	36132788	36156317	chr21:36132788-36156317	1	-	36132788	36132788	8553170	5	286,75,215,100,101,	0,898,4305,13467,23428,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	36132799	36146865	chr21:36132799-36146865	1	-	36132799	36132799	8553170	2	275,610,	0,13456,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	36132799	36175815	chr21:36132799-36175815	3	-	36132799	36132799	8553170	3	674,98,50,	0,37671,42966,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	36132799	36138464	chr21:36132799-36138464	1	-	36132799	36132799	8553170	3	275,298,170,	0,4294,5495,
#Partially deleted in new
chr21	36132799	36134873	chr21:36132799-36134873	1	-	36132799	36132799	8553170	2	275,242,	0,1832,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	36132800	36134006	chr21:36132800-36134006	1	-	36132800	36132800	8553170	2	274,320,	0,886,
#Partially deleted in new
chr21	36132800	36135589	chr21:36132800-36135589	1	-	36132800	36132800	8553170	2	274,290,	0,2499,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	36132801	36138868	chr21:36132801-36138868	1	-	36132801	36132801	8553170	3	273,122,420,	0,4292,5647,
#Partially deleted in new
chr21	36132802	36156336	chr21:36132802-36156336	1	-	36132802	36132802	8553170	2	272,120,	0,23414,
#Partially deleted in new
chr21	36134911	36146566	chr21:36134911-36146566	3	+	36135192	36146512	0	3	570,108,491,	0,2913,11164,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	36141395	36156306	chr21:36141395-36156306	1	-	36141395	36141395	789624	3	551,100,90,	0,4860,14821,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	36141406	36150710	chr21:36141406-36150710	0	-	36141406	36141406	8553170	3	540,1370,2741,	0,4849,6563,
#Partially deleted in new
chr21	36156781	36200445	chr21:36156781-36200445	0	+	36164733	36200445	789624	4	162,164,182,115,	0,7926,42288,43549,
#Boundary problem: need 37, got 0, diff 37, mapped 0.0
chr21	36164534	36294274	chr21:36164534-36294274	3	+	36164733	36293571	789624	37	59,164,182,171,190,99,124,110,115,121,120,103,192,685,272,153,101,191,1630,112,189,123,138,56,105,67,145,80,110,147,62,129,137,56,162,130,955,	0,173,34535,35796,44180,47018,47439,49546,49907,54837,58696,61030,63151,65915,68269,72727,74066,75230,80513,82982,83845,86627,89237,96142,99011,99213,105478,112486,113440,113674,115750,116948,123479,124221,124510,127569,128785,
#Partially deleted in new
chr21	36164835	36212048	chr21:36164835-36212048	0	+	36164835	36164835	8553170	4	36,190,99,75,	0,43879,46717,47138,
#Partially deleted in new
chr21	36168969	36170180	chr21:36168969-36170180	7	-	36168969	36168969	16724991	1	1211,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	36246300	36261915	chr21:36246300-36261915	0	+	36246300	36246300	8553170	6	377,112,189,123,138,1239,	0,1216,2079,4861,7471,14376,
#Deleted in new
chr21	36295172	36295702	chr21:36295172-36295702	7	-	36295172	36295172	16724991	1	530,	0,
#Deleted in new
chr21	36319791	36320670	chr21:36319791-36320670	3	-	36319791	36319791	8553170	1	879,	0,
#Partially deleted in new
chr21	36320188	36376646	chr21:36320188-36376646	3	+	36320264	36375296	0	17	115,73,133,215,148,148,129,120,98,105,123,75,46,167,889,158,1504,	0,13457,16685,17543,18585,21210,24390,24723,29122,36431,39766,39995,41994,43904,48799,52185,54954,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	36320188	36339527	chr21:36320188-36339527	0	+	36320188	36320188	8553170	5	115,73,133,215,754,	0,13457,16685,17543,18585,
#Partially deleted in new
chr21	36320230	36376646	chr21:36320230-36376646	0	+	36320230	36320230	8553170	16	73,133,215,148,148,129,120,98,105,123,75,46,167,889,158,1504,	0,16643,17501,18543,21168,24348,24681,29080,36389,39724,39953,41952,43862,48757,52143,54912,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	36333418	36336990	chr21:36333418-36336990	0	+	36333418	36333418	8553170	2	300,117,	0,3455,
#Partially deleted in new
chr21	36347871	36360049	chr21:36347871-36360049	0	+	36347871	36347871	8553170	4	389,98,105,95,	0,1439,8748,12083,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	36360629	36362040	chr21:36360629-36362040	3	+	36360629	36360629	8553170	2	229,367,	0,1044,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	36361835	36369115	chr21:36361835-36369115	0	+	36361835	36361835	8553170	3	393,167,128,	0,2257,7152,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr21	36369610	36386148	chr21:36369610-36386148	0	+	36369612	36375296	789624	8	266,158,166,88,137,24,100,89,	0,2763,5532,10620,12408,14576,15119,16449,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	36369610	36386148	chr21:36369610-36386148	0	+	36369610	36369610	8553170	5	266,158,137,100,89,	0,2763,12408,15119,16449,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	36369610	36386148	chr21:36369610-36386148	0	+	36369612	36375296	789624	7	266,158,166,98,57,100,89,	0,2763,5532,7799,11015,15119,16449,
#Partially deleted in new
chr21	36369610	36386148	chr21:36369610-36386148	0	+	36369610	36369610	8553170	3	266,158,89,	0,2763,16449,
#Partially deleted in new
chr21	36369610	36386148	chr21:36369610-36386148	0	+	36369612	36375296	789624	6	266,158,166,88,100,89,	0,2763,5532,10620,15119,16449,
#Partially deleted in new
chr21	36369610	36386148	chr21:36369610-36386148	0	+	36369610	36380312	789624	7	266,158,76,98,88,100,89,	0,2763,5532,7799,10620,15119,16449,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr21	36385377	36419015	chr21:36385377-36419015	3	+	36386136	36416366	789624	14	74,203,133,118,104,97,85,94,70,92,142,432,95,2741,	0,682,2220,6173,9169,12037,14143,17380,23383,23996,26085,27506,29917,30897,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	36386059	36398239	chr21:36386059-36398239	0	+	36386059	36386059	8553170	6	203,133,118,104,97,497,	0,1538,5491,8487,11355,11683,
#Deleted in new
chr21	36388877	36389112	chr21:36388877-36389112	7	-	36388877	36388877	16724991	1	235,	0,
#Partially deleted in new
chr21	36399501	36412962	chr21:36399501-36412962	0	+	36399501	36399501	8553170	4	104,94,142,201,	0,3256,11961,13260,
#Partially deleted in new
chr21	36430359	36481070	chr21:36430359-36481070	3	+	36430359	36430359	8553170	2	53,840,	0,49871,
#Partially deleted in new
chr21	36445730	36532408	chr21:36445730-36532408	3	+	36445730	36445730	8553170	2	277,438,	0,86240,
#Partially deleted in new
chr21	36445821	36460752	chr21:36445821-36460752	1	+	36445821	36445821	8553170	2	186,463,	0,14468,
#Partially deleted in new
chr21	36460620	36576569	chr21:36460620-36576569	3	-	36460975	36461695	789624	3	1156,138,159,	0,49742,115790,
#Partially deleted in new
chr21	36460620	36480090	chr21:36460620-36480090	1	-	36460975	36461695	789624	2	1156,596,	0,18874,
#Partially deleted in new
chr21	36460620	36542600	chr21:36460620-36542600	1	-	36460975	36461695	789624	3	1156,138,36,	0,49742,81944,
#Partially deleted in new
chr21	36460620	36480090	chr21:36460620-36480090	1	-	36460975	36461695	789624	3	1156,190,596,	0,16753,18874,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	36485866	36487760	chr21:36485866-36487760	3	+	36485866	36485866	8553170	1	1894,	0,
#Partially deleted in new
chr21	36485982	36487411	chr21:36485982-36487411	7	-	36485982	36485982	16724991	2	989,120,	0,1309,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	36526279	36542855	chr21:36526279-36542855	0	-	36526279	36526279	8553170	2	248,291,	0,16285,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	36632680	36637033	chr21:36632680-36637033	3	-	36632680	36632680	8553170	2	890,243,	0,4110,
#Deleted in new
chr21	36698772	36701564	chr21:36698772-36701564	3	-	36698772	36698772	8553170	2	71,268,	0,2524,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	36699132	36710613	chr21:36699132-36710613	0	+	36699132	36699132	8553170	2	789,1446,	0,10035,
#Partially deleted in new
chr21	36699133	36749917	chr21:36699133-36749917	3	+	36699746	36748092	789624	11	788,83,90,109,86,200,107,148,169,409,2253,	0,10034,13399,20687,23911,26985,31911,42583,44253,45594,48531,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr21	36699133	36746324	chr21:36699133-36746324	0	+	36699133	36699133	8553170	10	788,83,90,109,86,200,107,148,169,1597,	0,10034,13399,20687,23911,26985,31911,42583,44253,45594,
#Partially deleted in new
chr21	36709180	36745871	chr21:36709180-36745871	0	+	36709180	36745847	789624	10	70,90,109,86,200,107,148,169,409,77,	0,3352,10640,13864,16938,21864,32536,34206,35547,36614,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	36712565	36720587	chr21:36712565-36720587	0	+	36712565	36719985	789624	2	57,767,	0,7255,
#Partially deleted in new
chr21	36750887	36990236	chr21:36750887-36990236	3	-	36754245	36938883	789624	12	3530,214,115,161,68,272,183,944,163,146,135,79,	0,5654,8839,14124,16330,145972,179363,185561,187944,195121,211148,239270,
#Partially deleted in new
chr21	36750887	36980964	chr21:36750887-36980964	1	-	36754245	36938883	789624	12	3530,214,115,161,68,272,183,944,163,146,135,181,	0,5654,8839,14124,16330,145972,179363,185561,187944,195121,211148,229896,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr21	36751191	36966473	chr21:36751191-36966473	1	-	36754245	36938883	789624	12	3226,214,115,161,68,272,183,944,163,955,135,30,	0,5350,8535,13820,16026,145668,179059,185257,187640,196141,210844,215252,
#Deleted in new
chr21	36803983	36806284	chr21:36803983-36806284	3	-	36803983	36803983	8553170	2	282,249,	0,2052,
#Partially deleted in new
chr21	36851910	36852028	chr21:36851910-36852028	7	+	36851910	36851910	16724991	1	118,	0,
#Partially deleted in new
chr21	36896569	36930417	chr21:36896569-36930417	0	-	36896569	36896569	8553170	2	562,167,	0,33681,
#Partially deleted in new
chr21	36937167	36980628	chr21:36937167-36980628	0	-	36937167	36938883	789624	4	225,163,135,257,	0,1664,24868,43204,
#Partially deleted in new
chr21	36937184	36966639	chr21:36937184-36966639	0	-	36937184	36966638	789624	4	208,163,135,196,	0,1647,24851,29259,
#Partially deleted in new
chr21	36943266	36944125	chr21:36943266-36944125	7	+	36943266	36943266	16724991	2	250,289,	0,570,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	36966491	36975164	chr21:36966491-36975164	3	+	36966491	36966491	8553170	4	120,254,243,1565,	0,2062,5515,7108,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	36986738	36986851	chr21:36986738-36986851	3	-	36986738	36986738	8553170	1	113,	0,
#Deleted in new
chr21	36994642	36995075	chr21:36994642-36995075	7	+	36994642	36994642	16724991	1	433,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	37006149	37019659	chr21:37006149-37019659	0	+	37006149	37006149	8553170	4	84,67,68,1786,	0,2007,7401,11724,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	37006201	37019659	chr21:37006201-37019659	0	+	37006201	37006201	8553170	3	32,67,1786,	0,1955,11672,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	37006562	37019659	chr21:37006562-37019659	3	+	37006772	37018207	789624	4	314,67,68,1786,	0,1594,6988,11311,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	37045529	37045636	chr21:37045529-37045636	3	+	37045529	37045529	8553170	1	107,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	37059169	37073158	chr21:37059169-37073158	3	-	37065581	37072515	789624	5	6543,119,73,104,159,	0,8092,10382,13264,13830,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	37062845	37072811	chr21:37062845-37072811	1	-	37065581	37072587	789624	4	2867,119,73,378,	0,4416,6706,9588,
#Partially deleted in new
chr21	37065373	37072537	chr21:37065373-37072537	0	-	37065373	37065373	8553170	3	339,119,104,	0,1888,7060,
#Partially deleted in new
chr21	37065373	37073170	chr21:37065373-37073170	1	-	37065581	37072148	789624	6	339,119,73,166,104,171,	0,1888,4178,6771,7060,7626,
#Partially deleted in new
chr21	37065373	37072900	chr21:37065373-37072900	1	-	37065581	37072515	789624	5	339,119,73,104,53,	0,1888,4178,7060,7474,
#Partially deleted in new
chr21	37065373	37073011	chr21:37065373-37073011	1	-	37065581	37072515	789624	5	339,119,73,104,21,	0,1888,4178,7060,7617,
#Partially deleted in new
chr21	37069266	37072723	chr21:37069266-37072723	0	-	37069266	37069266	8553170	2	358,290,	0,3167,
#Partially deleted in new
chr21	37069551	37072997	chr21:37069551-37072997	0	-	37069551	37072148	789624	3	73,166,564,	0,2593,2882,
#Partially deleted in new
chr21	37073225	37135411	chr21:37073225-37135411	0	+	37073225	37073225	8553170	9	139,55,163,46,124,64,61,85,32,	0,35166,48591,49757,51393,52854,55777,59456,62154,
#Partially deleted in new
chr21	37073250	37165751	chr21:37073250-37165751	0	+	37087257	37165751	789624	33	223,155,43,151,88,54,121,86,95,63,55,163,46,124,64,61,85,135,81,113,121,123,102,93,65,137,327,252,47,57,74,165,202,	0,13996,14582,14945,15548,16982,18042,20754,22099,23330,35141,48566,49732,51368,52829,55752,59431,62129,65383,67310,71274,74230,75295,76827,77569,78642,79700,83404,86448,87551,88739,90800,92299,
#Partially deleted in new
chr21	37073257	37165765	chr21:37073257-37165765	0	+	37073257	37073257	8553170	32	107,155,151,88,54,121,86,95,63,55,163,46,124,64,61,85,135,81,113,121,123,102,93,65,137,327,252,47,57,74,165,216,	0,13989,14938,15541,16975,18035,20747,22092,23323,35134,48559,49725,51361,52822,55745,59424,62122,65376,67303,71267,74223,75288,76820,77562,78635,79693,83397,86441,87544,88732,90793,92292,
#Partially deleted in new
chr21	37073266	37165765	chr21:37073266-37165765	0	+	37087257	37165765	789624	32	98,155,43,151,88,121,86,95,63,55,163,46,124,64,61,85,135,81,113,121,123,102,93,65,137,327,252,47,57,74,165,216,	0,13980,14566,14929,15532,18026,20738,22083,23314,35125,48550,49716,51352,52813,55736,59415,62113,65367,67294,71258,74214,75279,76811,77553,78626,79684,83388,86432,87535,88723,90784,92283,
#Partially deleted in new
chr21	37073266	37151958	chr21:37073266-37151958	0	+	37087257	37151958	789624	26	98,155,43,151,88,54,121,86,95,63,55,163,46,124,64,61,85,135,81,113,121,123,102,93,65,66,	0,13980,14566,14929,15532,16966,18026,20738,22083,23314,35125,48550,49716,51352,52813,55736,59415,62113,65367,67294,71258,74214,75279,76811,77553,78626,
#Partially deleted in new
chr21	37073270	37203103	chr21:37073270-37203103	3	+	37087257	37201574	789624	46	94,155,43,151,88,54,121,86,95,63,55,163,46,124,64,61,85,135,81,113,121,123,102,93,65,137,327,252,47,57,74,165,1066,66,150,140,69,97,101,91,102,362,127,144,93,1664,	0,13976,14562,14925,15528,16962,18022,20734,22079,23310,35121,48546,49712,51348,52809,55732,59411,62109,65363,67290,71254,74210,75275,76807,77549,78622,79680,83384,86428,87531,88719,90780,92279,94284,99324,109503,112435,113778,115224,118063,118841,122404,124299,124611,126961,128169,
#Partially deleted in new
chr21	37073276	37135426	chr21:37073276-37135426	0	+	37073276	37073276	8553170	9	197,55,163,46,124,64,61,85,47,	0,35115,48540,49706,51342,52803,55726,59405,62103,
#Partially deleted in new
chr21	37073276	37151967	chr21:37073276-37151967	0	+	37073276	37073276	8553170	16	197,55,46,124,64,61,85,135,81,113,121,123,102,93,65,75,	0,35115,49706,51342,52803,55726,59405,62103,65357,67284,71248,74204,75269,76801,77543,78616,
#Partially deleted in new
chr21	37073280	37135452	chr21:37073280-37135452	0	+	37073280	37073280	8553170	10	84,55,106,163,46,124,64,61,85,73,	0,35111,47956,48536,49702,51338,52799,55722,59401,62099,
#Partially deleted in new
chr21	37073280	37153323	chr21:37073280-37153323	1	+	37121846	37153306	789624	18	84,55,163,46,124,64,61,85,135,81,113,121,123,102,93,65,137,373,	0,35111,48536,49702,51338,52799,55722,59401,62099,65353,67280,71244,74200,75265,76797,77539,78612,79670,
#Partially deleted in new
chr21	37073289	37099098	chr21:37073289-37099098	1	+	37087257	37097972	789624	11	75,155,43,151,88,54,121,86,95,63,1184,	0,13957,14543,14906,15509,16943,18003,20715,22060,23291,24625,
#Boundary problem: need 46, got 0, diff 46, mapped 0.0
chr21	37081595	37203112	chr21:37081595-37203112	1	+	37087257	37201574	789624	46	2736,155,43,151,88,54,121,86,95,63,55,163,46,124,64,61,85,135,81,113,121,123,102,93,65,137,327,252,47,57,74,165,1066,66,150,140,69,97,101,91,102,362,127,144,93,1673,	0,5651,6237,6600,7203,8637,9697,12409,13754,14985,26796,40221,41387,43023,44484,47407,51086,53784,57038,58965,62929,65885,66950,68482,69224,70297,71355,75059,78103,79206,80394,82455,83954,85959,90999,101178,104110,105453,106899,109738,110516,114079,115974,116286,118636,119844,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	37083625	37093402	chr21:37083625-37093402	0	+	37083625	37083625	8553170	7	706,155,514,88,54,334,94,	0,3621,4207,5173,6607,7667,9683,
#Partially deleted in new
chr21	37085789	37203112	chr21:37085789-37203112	1	+	37087257	37201574	789624	45	1612,43,151,88,54,121,86,95,63,55,163,46,124,64,61,85,135,81,113,121,123,102,93,65,137,327,252,47,57,74,165,1066,66,150,140,69,97,101,91,102,362,127,144,93,1673,	0,2043,2406,3009,4443,5503,8215,9560,10791,22602,36027,37193,38829,40290,43213,46892,49590,52844,54771,58735,61691,62756,64288,65030,66103,67161,70865,73909,75012,76200,78261,79760,81765,86805,96984,99916,101259,102705,105544,106322,109885,111780,112092,114442,115650,
#Partially deleted in new
chr21	37085789	37203112	chr21:37085789-37203112	0	+	37085789	37085789	8553170	44	1612,43,151,88,54,121,95,63,55,163,46,124,64,61,85,135,81,113,121,123,102,93,65,137,327,252,47,57,74,165,1066,66,150,140,69,97,101,91,102,362,127,144,93,1673,	0,2043,2406,3009,4443,5503,9560,10791,22602,36027,37193,38829,40290,43213,46892,49590,52844,54771,58735,61691,62756,64288,65030,66103,67161,70865,73909,75012,76200,78261,79760,81765,86805,96984,99916,101259,102705,105544,106322,109885,111780,112092,114442,115650,
#Partially deleted in new
chr21	37091326	37096885	chr21:37091326-37096885	0	+	37091326	37091326	8553170	4	87,86,95,305,	0,2678,4023,5254,
#Partially deleted in new
chr21	37091393	37095490	chr21:37091393-37095490	0	+	37091393	37091393	8553170	3	20,86,141,	0,2611,3956,
#Deleted in new
chr21	37100813	37101343	chr21:37100813-37101343	3	+	37100813	37100813	8553170	1	530,	0,
#Boundary problem: need 36, got 0, diff 36, mapped 0.0
chr21	37107737	37203112	chr21:37107737-37203112	0	+	37107737	37107737	8553170	36	709,163,46,124,64,61,85,135,81,113,121,123,102,93,65,137,327,252,47,57,74,165,1066,66,150,140,69,97,101,91,102,362,127,144,93,1673,	0,14079,15245,16881,18342,21265,24944,27642,30896,32823,36787,39743,40808,42340,43082,44155,45213,48917,51961,53064,54252,56313,57812,59817,64857,75036,77968,79311,80757,83596,84374,87937,89832,90144,92494,93702,
#Partially deleted in new
chr21	37144559	37153277	chr21:37144559-37153277	0	+	37144559	37153277	789624	6	86,123,93,65,137,327,	0,2921,5518,6260,7333,8391,
#Partially deleted in new
chr21	37153124	37165640	chr21:37153124-37165640	0	+	37153124	37165640	789624	8	153,252,54,47,57,74,165,91,	0,3530,4036,6574,7677,8865,10926,12425,
#Partially deleted in new
chr21	37153236	37165765	chr21:37153236-37165765	0	+	37153236	37153236	8553170	8	41,252,73,47,57,74,165,216,	0,3418,4894,6462,7565,8753,10814,12313,
#Partially deleted in new
chr21	37156740	37186079	chr21:37156740-37186079	0	+	37156740	37156740	8553170	10	166,47,57,74,165,1066,66,150,140,374,	0,2958,4061,5249,7310,8809,10814,15854,26033,28965,
#Partially deleted in new
chr21	37159518	37165765	chr21:37159518-37165765	0	+	37159518	37159518	8553170	5	227,57,74,165,216,	0,1283,2471,4532,6031,
#Partially deleted in new
chr21	37187665	37193926	chr21:37187665-37193926	3	-	37187665	37187665	789624	2	978,119,	0,6142,
#Partially deleted in new
chr21	37191333	37201621	chr21:37191333-37201621	0	+	37191333	37201574	789624	6	91,362,127,144,93,182,	0,4341,6236,6548,8898,10106,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	37194452	37197947	chr21:37194452-37197947	0	+	37194452	37194452	8553170	5	246,52,362,127,66,	0,513,1222,3117,3429,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	37208502	37221736	chr21:37208502-37221736	1	+	37208502	37208502	789624	3	42,103,1499,	0,151,11735,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	37208502	37220695	chr21:37208502-37220695	0	+	37208502	37208502	8553170	4	42,103,58,458,	0,151,5593,11735,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	37208502	37220688	chr21:37208502-37220688	3	+	37208502	37208502	8553170	5	42,103,110,89,128,	0,151,1502,7902,12058,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	37208502	37220697	chr21:37208502-37220697	0	+	37208502	37208502	8553170	4	42,103,89,460,	0,151,7902,11735,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	37208502	37220696	chr21:37208502-37220696	1	+	37208502	37208502	8553170	5	42,103,58,89,459,	0,151,5593,7902,11735,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	37215604	37215903	chr21:37215604-37215903	3	+	37215604	37215604	8553170	1	299,	0,
#Partially deleted in new
chr21	37221418	37237744	chr21:37221418-37237744	3	+	37221418	37221418	8553170	2	179,341,	0,15985,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr21	37223419	37267532	chr21:37223419-37267532	3	-	37225543	37267294	789624	8	2207,153,151,75,81,150,144,295,	0,4234,4803,8957,9942,15040,17076,43818,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr21	37223419	37267919	chr21:37223419-37267919	0	-	37223419	37223419	8553170	10	2207,153,151,78,483,269,81,150,144,682,	0,4234,4803,5725,8073,8957,9942,15040,17076,43818,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	37223419	37229483	chr21:37223419-37229483	0	-	37223419	37223419	8553170	2	4387,1261,	0,4803,
#Partially deleted in new
chr21	37225298	37267351	chr21:37225298-37267351	1	-	37225543	37267294	789624	5	328,153,151,75,114,	0,2355,2924,7078,41939,
#Partially deleted in new
chr21	37225471	37267346	chr21:37225471-37267346	1	-	37225543	37267294	789624	7	155,153,151,75,150,144,109,	0,2182,2751,6905,12988,15024,41766,
#Partially deleted in new
chr21	37225515	37267329	chr21:37225515-37267329	0	-	37225515	37225515	8553170	9	111,153,151,75,81,150,144,56,92,	0,2138,2707,6861,7846,12944,14980,41276,41722,
#Partially deleted in new
chr21	37225543	37267532	chr21:37225543-37267532	1	-	37225543	37267294	789624	7	83,153,151,75,81,150,295,	0,2110,2679,6833,7818,12916,41694,
#Partially deleted in new
chr21	37230517	37233442	chr21:37230517-37233442	0	-	37230517	37230517	8553170	4	301,98,75,81,	0,975,1859,2844,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	37233291	37267318	chr21:37233291-37267318	0	-	37233291	37233291	8553170	4	151,150,144,81,	0,5168,7204,33946,
#Partially deleted in new
chr21	37238204	37267403	chr21:37238204-37267403	0	-	37238204	37238204	8553170	3	405,144,166,	0,2291,29033,
#Partially deleted in new
chr21	37238355	37267301	chr21:37238355-37267301	0	-	37238355	37238355	8553170	2	254,64,	0,28882,
#Partially deleted in new
chr21	37261081	37267153	chr21:37261081-37267153	0	-	37261081	37261081	8553170	2	856,362,	0,5710,
#Partially deleted in new
chr21	37261081	37267340	chr21:37261081-37267340	0	-	37261081	37261081	8553170	2	856,103,	0,6156,
#Partially deleted in new
chr21	37267783	37268497	chr21:37267783-37268497	3	+	37267783	37267783	8553170	1	714,	0,
#Partially deleted in new
chr21	37365476	37365932	chr21:37365476-37365932	3	-	37365476	37365476	8553170	1	456,	0,
#Partially deleted in new
chr21	37365572	37512054	chr21:37365572-37512054	0	+	37420374	37512054	789624	12	262,86,197,120,189,148,287,147,141,307,125,144,	0,54726,107111,112608,115065,120894,124602,127444,130545,139710,140526,146338,
#Partially deleted in new
chr21	37365789	37512531	chr21:37365789-37512531	3	+	37420374	37512531	0	12	396,86,197,93,189,148,287,147,141,307,125,621,	0,54509,106894,112418,114848,120677,124385,127227,130328,139493,140309,146121,
#Partially deleted in new
chr21	37366933	37515172	chr21:37366933-37515172	1	+	37472760	37512531	789624	11	695,197,93,189,148,287,147,141,307,125,3262,	0,105750,111274,113704,119533,123241,126083,129184,138349,139165,144977,
#Partially deleted in new
chr21	37367100	37512772	chr21:37367100-37512772	1	+	37420374	37512531	0	12	528,86,197,120,189,148,287,147,141,307,125,862,	0,53198,105583,111080,113537,119366,123074,125916,129017,138182,138998,144810,
#Partially deleted in new
chr21	37367516	37512918	chr21:37367516-37512918	1	+	37420374	37512531	0	12	112,86,197,93,189,148,287,147,141,307,125,1008,	0,52782,105167,110691,113121,118950,122658,125500,128601,137766,138582,144394,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr21	37367556	37515377	chr21:37367556-37515377	1	+	37420374	37506307	0	13	72,101,86,197,120,189,148,287,147,141,307,256,3467,	0,43013,52742,105127,110624,113081,118910,122618,125460,128561,137726,138542,144354,
#Partially deleted in new
chr21	37368015	37480669	chr21:37368015-37480669	0	+	37420374	37480669	789624	5	117,86,197,93,32,	0,52283,104668,110192,112622,
#Partially deleted in new
chr21	37368058	37486493	chr21:37368058-37486493	0	+	37420374	37486493	789624	6	74,86,197,120,189,27,	0,52240,104625,110122,112579,118408,
#Partially deleted in new
chr21	37375093	37512921	chr21:37375093-37512921	1	+	37420374	37512531	0	12	24,86,197,120,189,148,287,147,141,307,125,1011,	0,45205,97590,103087,105544,111373,115081,117923,121024,130189,131005,136817,
#Partially deleted in new
chr21	37418904	37515376	chr21:37418904-37515376	1	+	37420374	37512531	0	11	1480,197,120,189,148,287,147,141,307,125,3466,	0,53779,59276,61733,67562,71270,74112,77213,86378,87194,93006,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr21	37418904	37526358	chr21:37418904-37526358	1	+	37420374	37512531	0	11	1480,197,93,189,148,287,147,141,307,125,14448,	0,53779,59303,61733,67562,71270,74112,77213,86378,87194,93006,
#Partially deleted in new
chr21	37420298	37472829	chr21:37420298-37472829	0	+	37472760	37472829	789624	3	86,132,146,	0,9970,52385,
#Partially deleted in new
chr21	37420298	37506302	chr21:37420298-37506302	1	+	37420374	37506302	0	10	86,197,120,189,148,287,147,141,307,32,	0,52385,57882,60339,66168,69876,72718,75819,84984,85972,
#Partially deleted in new
chr21	37420327	37505554	chr21:37420327-37505554	0	+	37456277	37505554	789624	10	57,179,197,120,189,148,287,147,168,272,	0,35802,52356,57853,60310,66139,69847,72689,75763,84955,
#Partially deleted in new
chr21	37420374	37511954	chr21:37420374-37511954	1	+	37420374	37511954	0	10	10,197,120,189,148,287,147,141,307,44,	0,52309,57806,60263,66092,69800,72642,75743,84908,91536,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	37472779	37481649	chr21:37472779-37481649	0	+	37472779	37472779	8553170	3	101,120,1012,	0,5401,7858,
#Partially deleted in new
chr21	37478284	37488127	chr21:37478284-37488127	0	+	37478284	37478284	8553170	3	16,189,1661,	0,2353,8182,
#Partially deleted in new
chr21	37486147	37505357	chr21:37486147-37505357	0	+	37486147	37486147	8553170	5	467,287,147,141,75,	0,4027,6869,9970,19135,
#Partially deleted in new
chr21	37486639	37505475	chr21:37486639-37505475	0	+	37486639	37486639	8553170	5	28,287,147,141,193,	0,3535,6377,9478,18643,
#Partially deleted in new
chr21	37488784	37512559	chr21:37488784-37512559	0	+	37488784	37488784	8553170	7	79,287,147,141,307,125,649,	0,1390,4232,7333,16498,17314,23126,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	37501325	37512064	chr21:37501325-37512064	0	+	37501325	37501325	8553170	3	4264,125,154,	0,4773,10585,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	37607375	37916446	chr21:37607375-37916446	1	-	37625158	37840682	789624	4	18109,921,52,563,	0,106835,233282,308508,
#Partially deleted in new
chr21	37717101	37719569	chr21:37717101-37719569	3	-	37717101	37717101	8553170	2	134,223,	0,2245,
#Partially deleted in new
chr21	38006543	38010618	chr21:38006543-38010618	3	-	38006543	38006543	8553170	2	283,141,	0,3934,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	38121450	38156511	chr21:38121450-38156511	0	+	38121450	38121450	789624	3	151,357,208,	0,861,34853,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	38121472	38156511	chr21:38121472-38156511	0	+	38121472	38121472	789624	4	129,100,115,208,	0,839,32942,34831,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	38121472	38156511	chr21:38121472-38156511	0	+	38121472	38121472	789624	3	129,100,208,	0,839,34831,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	38122331	38156511	chr21:38122331-38156511	0	+	38122331	38122331	8553170	3	80,115,208,	0,32083,33972,
#Partially deleted in new
chr21	38155548	38188016	chr21:38155548-38188016	0	+	38155548	38155548	8553170	5	304,125,152,100,85,	0,755,1385,13620,32383,
#Partially deleted in new
chr21	38157033	38299406	chr21:38157033-38299406	0	+	38299261	38299406	789624	5	52,140,142,98,163,	0,100012,134572,139892,142210,
#Partially deleted in new
chr21	38157033	38299406	chr21:38157033-38299406	0	+	38299261	38299406	789624	3	52,98,163,	0,139892,142210,
#Partially deleted in new
chr21	38157033	38299406	chr21:38157033-38299406	0	+	38299261	38299406	789624	3	52,98,154,	0,139892,142219,
#Partially deleted in new
chr21	38157033	38299337	chr21:38157033-38299337	0	+	38299261	38299337	789624	6	52,100,140,142,98,94,	0,12135,100012,134572,139892,142210,
#Partially deleted in new
chr21	38157033	38299406	chr21:38157033-38299406	0	+	38299261	38299406	789624	7	52,100,45,140,142,98,163,	0,12135,99709,100012,134572,139892,142210,
#Partially deleted in new
chr21	38157033	38299406	chr21:38157033-38299406	0	+	38299261	38299406	789624	5	52,100,142,98,163,	0,12135,134572,139892,142210,
#Partially deleted in new
chr21	38157033	38299406	chr21:38157033-38299406	0	+	38299261	38299406	789624	4	52,100,98,163,	0,12135,139892,142210,
#Deleted in new
chr21	38204140	38206080	chr21:38204140-38206080	7	-	38204140	38204140	16724991	1	1940,	0,
#Deleted in new
chr21	38204543	38205606	chr21:38204543-38205606	5	-	38204543	38204543	16724991	1	1063,	0,
#Deleted in new
chr21	38206155	38208644	chr21:38206155-38208644	3	+	38206155	38206155	789624	3	205,145,510,	0,316,1979,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	38237216	38238201	chr21:38237216-38238201	3	-	38237216	38237216	8553170	2	198,89,	0,896,
#Deleted in new
chr21	38238226	38238664	chr21:38238226-38238664	7	-	38238226	38238226	16724991	1	438,	0,
#Partially deleted in new
chr21	38256697	38301822	chr21:38256697-38301822	1	+	38299261	38300389	789624	5	90,140,98,139,2579,	0,348,40228,41446,42546,
#Partially deleted in new
chr21	38256697	38301822	chr21:38256697-38301822	1	+	38299261	38300389	789624	5	90,140,142,98,2579,	0,348,34908,40228,42546,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	38256740	38307357	chr21:38256740-38307357	3	+	38299261	38300389	789624	4	47,140,98,8114,	0,305,40185,42503,
#Partially deleted in new
chr21	38256740	38299445	chr21:38256740-38299445	0	+	38299261	38299445	789624	5	47,82,103,98,202,	0,363,28846,40185,42503,
#Partially deleted in new
chr21	38256740	38299731	chr21:38256740-38299731	0	+	38299261	38299731	789624	4	47,82,98,488,	0,363,40185,42503,
#Partially deleted in new
chr21	38256741	38299380	chr21:38256741-38299380	0	+	38299261	38299380	789624	7	46,140,44,148,98,98,137,	0,304,10557,12152,28850,40184,42502,
#Partially deleted in new
chr21	38256874	38299319	chr21:38256874-38299319	0	+	38299261	38299319	789624	5	311,103,98,139,76,	0,28712,40051,41269,42369,
#Partially deleted in new
chr21	38256947	38301490	chr21:38256947-38301490	1	+	38299261	38300389	789624	3	238,98,2247,	0,39978,42296,
#Partially deleted in new
chr21	38272249	38301490	chr21:38272249-38301490	1	+	38299261	38300389	789624	4	308,103,98,2238,	0,13337,24676,27003,
#Partially deleted in new
chr21	38272294	38299997	chr21:38272294-38299997	0	+	38299261	38299997	789624	3	263,98,754,	0,24631,26949,
#Partially deleted in new
chr21	38272419	38301822	chr21:38272419-38301822	1	+	38299261	38300389	789624	3	138,98,2579,	0,24506,26824,
#Partially deleted in new
chr21	38272422	38301821	chr21:38272422-38301821	1	+	38299261	38300389	789624	4	135,103,98,2578,	0,13164,24503,26821,
#Deleted in new
chr21	38296556	38299731	chr21:38296556-38299731	0	+	38299261	38299731	789624	3	79,98,488,	0,369,2687,
#Deleted in new
chr21	38296925	38299678	chr21:38296925-38299678	0	+	38299261	38299678	789624	2	86,435,	0,2318,
#Duplicated in new
chr21	38323634	38333364	chr21:38323634-38333364	3	-	38323634	38323634	8553170	5	264,172,52,71,49,	0,2148,8791,9327,9681,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	38326351	38333421	chr21:38326351-38333421	1	-	38326351	38326351	8553170	4	194,52,71,106,	0,6074,6610,6964,
#Partially deleted in new
chr21	38380026	38498483	chr21:38380026-38498483	3	-	38383402	38498380	0	10	3897,48,57,69,72,81,204,152,218,121,	0,10968,11632,12349,20547,22530,23479,43383,65377,118336,
#Partially deleted in new
chr21	38380026	38584900	chr21:38380026-38584900	1	-	38383402	38423521	0	9	3897,48,57,69,81,204,152,86,57,	0,10968,11632,12349,22530,23479,43383,195635,204817,
#Partially deleted in new
chr21	38380026	38498442	chr21:38380026-38498442	1	-	38383402	38498380	789624	9	3897,48,57,69,81,204,152,218,80,	0,10968,11632,12349,22530,23479,43383,65377,118336,
#Partially deleted in new
chr21	38380026	38498442	chr21:38380026-38498442	1	-	38383402	38498380	789624	9	3897,48,57,72,81,204,152,218,80,	0,10968,11632,20547,22530,23479,43383,65377,118336,
#Partially deleted in new
chr21	38380026	38661694	chr21:38380026-38661694	1	-	38383402	38575700	789624	11	3897,48,57,72,81,204,152,218,86,102,37,	0,10968,11632,20547,22530,23479,43383,65377,195635,204817,281631,
#Partially deleted in new
chr21	38380026	38584945	chr21:38380026-38584945	1	-	38383402	38575700	0	10	3897,48,57,69,81,204,152,218,86,102,	0,10968,11632,12349,22530,23479,43383,65377,195635,204817,
#Partially deleted in new
chr21	38380026	38661694	chr21:38380026-38661694	1	-	38383402	38575700	0	12	3897,48,57,69,72,81,204,152,218,86,102,37,	0,10968,11632,12349,20547,22530,23479,43383,65377,195635,204817,281631,
#Partially deleted in new
chr21	38380029	38661780	chr21:38380029-38661780	1	-	38383402	38575700	0	11	3894,48,57,69,81,204,152,218,86,102,123,	0,10965,11629,12346,22527,23476,43380,65374,195632,204814,281628,
#Partially deleted in new
chr21	38383125	38498476	chr21:38383125-38498476	1	-	38383402	38423521	789624	9	798,48,57,69,72,81,204,152,114,	0,7869,8533,9250,17448,19431,20380,40284,115237,
#Partially deleted in new
chr21	38383290	38660667	chr21:38383290-38660667	1	-	38383402	38575700	0	12	633,48,57,69,72,81,204,152,218,86,102,146,	0,7704,8368,9085,17283,19266,20215,40119,62113,192371,201553,277231,
#Partially deleted in new
chr21	38391658	38498456	chr21:38391658-38498456	0	-	38391658	38391658	8553170	8	57,69,81,204,152,218,95,94,	0,717,10898,11847,31751,53745,82368,106704,
#Partially deleted in new
chr21	38395369	38445621	chr21:38395369-38445621	0	-	38395369	38395369	8553170	6	211,72,81,204,152,218,	0,5204,7187,8136,28040,50034,
#Partially deleted in new
chr21	38400007	38661780	chr21:38400007-38661780	1	-	38400007	38445543	789624	9	14,72,81,204,152,218,86,102,123,	0,566,2549,3498,23402,45396,175654,184836,261650,
#Partially deleted in new
chr21	38400071	38661694	chr21:38400071-38661694	0	-	38400071	38400071	8553170	8	574,81,204,152,218,86,102,37,	0,2485,3434,23338,45332,175590,184772,261586,
#Partially deleted in new
chr21	38403603	38449105	chr21:38403603-38449105	0	-	38403603	38403603	8553170	4	106,152,218,84,	0,19806,41800,45418,
#Partially deleted in new
chr21	38470774	38661694	chr21:38470774-38661694	0	-	38470774	38470774	789624	5	1306,95,86,102,37,	0,3252,104887,114069,190883,
#Deleted in new
chr21	38502444	38502621	chr21:38502444-38502621	7	+	38502444	38502444	16724991	1	177,	0,
#Deleted in new
chr21	38739020	38742517	chr21:38739020-38742517	1	-	38739020	38739020	8553170	4	309,99,185,1197,	0,1295,1863,2300,
#Deleted in new
chr21	38739020	38742053	chr21:38739020-38742053	0	-	38739020	38739020	8553170	5	309,99,185,52,36,	0,1295,1863,2300,2997,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr21	38805306	38824955	chr21:38805306-38824955	3	+	38810034	38822889	0	11	310,150,72,112,120,201,84,222,264,119,2282,	0,664,4728,7696,8966,9474,11701,13118,14196,16279,17367,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr21	38805830	38824955	chr21:38805830-38824955	1	+	38810034	38822889	0	10	290,72,112,120,201,84,222,264,119,2282,	0,4204,7172,8442,8950,11177,12594,13672,15755,16843,
#Partially deleted in new
chr21	38805950	38814981	chr21:38805950-38814981	0	+	38810034	38814981	789624	6	170,358,72,112,120,201,	0,500,4084,7052,8322,8830,
#Partially deleted in new
chr21	38809635	38818646	chr21:38809635-38818646	0	+	38810034	38818646	789624	7	161,72,112,120,201,84,222,	0,399,3367,4637,5145,7372,8789,
#Partially deleted in new
chr21	38846246	38848644	chr21:38846246-38848644	3	+	38846246	38846246	8553170	2	71,416,	0,1982,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	38876086	38938429	chr21:38876086-38938429	1	-	38876086	38876086	789624	4	4286,65,56,620,	0,25814,47551,61723,
#Deleted in new
chr21	38894784	38894867	chr21:38894784-38894867	3	+	38894784	38894784	8553170	1	83,	0,
#Deleted in new
chr21	38894916	38895252	chr21:38894916-38895252	7	+	38894916	38894916	16724991	1	336,	0,
#Deleted in new
chr21	38912737	38915148	chr21:38912737-38915148	0	-	38912737	38912737	8553170	2	680,158,	0,2253,
#Partially deleted in new
chr21	38913186	38926180	chr21:38913186-38926180	1	-	38913186	38913186	8553170	8	231,104,101,199,98,88,56,156,	0,1804,4113,6131,7555,10239,10451,12838,
#Partially deleted in new
chr21	38913312	38926277	chr21:38913312-38926277	1	-	38913312	38913312	8553170	4	105,104,268,253,	0,1678,10113,12712,
#Deleted in new
chr21	38919060	38919521	chr21:38919060-38919521	0	-	38919060	38919060	8553170	1	461,	0,
#Deleted in new
chr21	38974428	38977774	chr21:38974428-38977774	3	-	38974428	38974428	789624	3	1419,115,64,	0,3024,3282,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	38988706	39006153	chr21:38988706-39006153	3	-	38988706	38988706	8553170	3	720,198,494,	0,2120,16953,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	39006647	39011329	chr21:39006647-39011329	3	-	39006647	39006647	8553170	3	137,130,242,	0,1454,4440,
#Deleted in new
chr21	39028535	39029128	chr21:39028535-39029128	3	-	39028535	39028535	8553170	2	164,128,	0,465,
#Deleted in new
chr21	39127567	39128040	chr21:39127567-39128040	7	+	39127567	39127567	16724991	1	473,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	39171129	39172106	chr21:39171129-39172106	7	-	39171129	39171129	16724991	1	977,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	39174768	39183851	chr21:39174768-39183851	3	-	39175589	39183385	789624	7	896,137,199,63,152,107,600,	0,2666,3680,5155,5516,7003,8483,
#Deleted in new
chr21	39175457	39178820	chr21:39175457-39178820	0	-	39175457	39175457	8553170	3	207,137,372,	0,1977,2991,
#Partially deleted in new
chr21	39175587	39183287	chr21:39175587-39183287	0	-	39183247	39183287	789624	7	77,137,199,63,152,107,224,	0,1847,2861,4336,4697,6184,7476,
#Partially deleted in new
chr21	39175589	39183488	chr21:39175589-39183488	1	-	39175589	39183385	789624	6	75,137,199,152,107,237,	0,1845,2859,4695,6182,7662,
#Partially deleted in new
chr21	39175589	39183385	chr21:39175589-39183385	0	-	39180378	39183385	789624	6	75,137,199,63,152,134,	0,1845,2859,4334,4695,7662,
#Partially deleted in new
chr21	39184175	39313819	chr21:39184175-39313819	3	-	39187025	39313491	0	42	3242,918,900,168,221,167,153,144,42,73,126,121,156,62,112,83,125,108,126,190,95,132,94,184,186,226,129,135,151,99,41,101,71,101,222,161,99,151,60,30,59,377,	0,12322,14587,16043,18149,21932,25819,26610,28490,29305,31061,33976,34329,40232,40910,44324,45136,48001,48197,52419,54303,63525,66620,71469,74311,80284,80715,85723,86107,90198,91997,93075,94567,95972,109635,111567,112089,114256,128665,128896,129065,129267,
#Deleted in new
chr21	39184468	39184899	chr21:39184468-39184899	3	+	39184468	39184468	8553170	1	431,	0,
#Partially deleted in new
chr21	39187245	39264941	chr21:39187245-39264941	0	-	39215345	39264941	789624	26	172,918,900,168,221,167,153,144,42,73,126,132,62,112,83,125,108,126,190,95,132,94,184,186,226,51,	0,9252,11517,12973,15079,18862,22749,23540,25420,26235,27991,31283,37162,37840,41254,42066,44931,45127,49349,51233,60455,63550,68399,71241,77214,77645,
#Partially deleted in new
chr21	39190218	39313570	chr21:39190218-39313570	1	-	39196258	39313491	0	41	7197,900,168,221,167,153,144,42,73,126,121,156,62,112,83,125,108,126,190,95,132,94,184,186,226,129,135,151,99,41,101,71,101,222,161,99,151,60,30,59,128,	0,8544,10000,12106,15889,19776,20567,22447,23262,25018,27933,28286,34189,34867,38281,39093,41958,42154,46376,48260,57482,60577,65426,68268,74241,74672,79680,80064,84155,85954,87032,88524,89929,103592,105524,106046,108213,122622,122853,123022,123224,
#Partially deleted in new
chr21	39193816	39313590	chr21:39193816-39313590	1	-	39194722	39313491	0	42	935,918,900,168,221,167,153,144,42,73,126,121,156,62,112,83,125,108,126,190,95,132,94,184,186,226,129,135,151,99,41,101,71,101,222,161,99,151,60,30,59,148,	0,2681,4946,6402,8508,12291,16178,16969,18849,19664,21420,24335,24688,30591,31269,34683,35495,38360,38556,42778,44662,53884,56979,61828,64670,70643,71074,76082,76466,80557,82356,83434,84926,86331,99994,101926,102448,104615,119024,119255,119424,119626,
#Partially deleted in new
chr21	39199418	39200496	chr21:39199418-39200496	0	-	39199418	39199418	8553170	2	244,278,	0,800,
#Partially deleted in new
chr21	39202365	39229392	chr21:39202365-39229392	0	-	39202365	39229392	789624	12	180,167,153,42,73,126,121,156,62,112,83,81,	0,3742,7629,10300,11115,12871,15786,16139,22042,22720,26134,26946,
#Partially deleted in new
chr21	39209785	39218660	chr21:39209785-39218660	0	-	39209785	39209785	8553170	7	362,64,42,73,126,121,156,	0,1080,2880,3695,5451,8366,8719,
#Partially deleted in new
chr21	39216623	39217506	chr21:39216623-39217506	7	+	39216623	39216623	16724991	2	160,106,	0,777,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	39217092	39219805	chr21:39217092-39219805	3	-	39217092	39217092	8553170	2	85,404,	0,2309,
#Deleted in new
chr21	39235385	39236020	chr21:39235385-39236020	7	-	39235385	39235385	16724991	1	635,	0,
#Partially deleted in new
chr21	39236717	39280213	chr21:39236717-39280213	0	-	39264558	39280213	789624	15	67,95,132,94,184,186,105,129,135,151,99,41,101,71,66,	0,1761,10983,14078,18927,21769,27742,28173,33181,33565,37656,39455,40533,42025,43430,
#Partially deleted in new
chr21	39236717	39280213	chr21:39236717-39280213	0	-	39264677	39280213	789624	15	67,95,132,94,184,186,226,34,135,151,99,41,101,71,66,	0,1761,10983,14078,18927,21769,27742,28268,33181,33565,37656,39455,40533,42025,43430,
#Partially deleted in new
chr21	39236717	39280213	chr21:39236717-39280213	0	-	39250866	39280213	789624	14	67,95,132,94,186,226,129,135,151,99,41,101,71,66,	0,1761,10983,14078,21769,27742,28173,33181,33565,37656,39455,40533,42025,43430,
#Partially deleted in new
chr21	39236718	39280213	chr21:39236718-39280213	0	-	39250856	39280213	789624	15	66,95,132,94,164,186,226,129,135,151,99,41,101,71,66,	0,1760,10982,14077,18946,21768,27741,28172,33180,33564,37655,39454,40532,42024,43429,
#Partially deleted in new
chr21	39236718	39280213	chr21:39236718-39280213	0	-	39236718	39280213	789624	14	66,95,94,184,186,226,129,135,151,99,41,101,71,66,	0,1760,14077,18926,21768,27741,28172,33180,33564,37655,39454,40532,42024,43429,
#Partially deleted in new
chr21	39278496	39280207	chr21:39278496-39280207	0	-	39278496	39278496	8553170	2	317,60,	0,1651,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	39296436	39313642	chr21:39296436-39313642	1	-	39298417	39313491	0	5	2146,60,30,59,200,	0,16404,16635,16804,17006,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	39298089	39321559	chr21:39298089-39321559	0	-	39298089	39298089	8553170	5	493,60,30,59,534,	0,14751,14982,15151,22936,
#Partially deleted in new
chr21	39312562	39313301	chr21:39312562-39313301	0	-	39312562	39312562	8553170	3	338,30,61,	0,509,678,
#Partially deleted in new
chr21	39313934	39314962	chr21:39313934-39314962	3	+	39313934	39313934	789624	1	1028,	0,
#Partially deleted in new
chr21	39315706	39323218	chr21:39315706-39323218	3	+	39315706	39315706	789624	3	109,165,417,	0,1338,7095,
#Partially deleted in new
chr21	39342314	39348991	chr21:39342314-39348991	0	-	39345937	39348917	789624	7	845,129,129,48,30,33,89,	0,2831,3515,5977,6107,6230,6588,
#Partially deleted in new
chr21	39342314	39349200	chr21:39342314-39349200	3	-	39343111	39348917	789624	6	845,129,48,30,33,298,	0,2831,5977,6107,6230,6588,
#Partially deleted in new
chr21	39342314	39349140	chr21:39342314-39349140	0	-	39347466	39348917	789624	8	845,129,129,100,48,30,33,238,	0,2831,3515,5064,5977,6107,6230,6588,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	39342314	39349099	chr21:39342314-39349099	0	-	39342314	39342314	8553170	5	845,3194,30,33,197,	0,2831,6107,6230,6588,
#Partially deleted in new
chr21	39342314	39349344	chr21:39342314-39349344	0	-	39342314	39342314	8553170	8	845,129,1463,105,48,30,33,54,	0,2831,3515,5064,5977,6107,6230,6976,
#Partially deleted in new
chr21	39342645	39349088	chr21:39342645-39349088	0	-	39347474	39348917	789624	7	514,129,105,48,30,33,186,	0,2500,4733,5646,5776,5899,6257,
#Partially deleted in new
chr21	39342691	39349053	chr21:39342691-39349053	1	-	39343111	39348917	789624	5	468,129,48,33,151,	0,2454,5600,5853,6211,
#Partially deleted in new
chr21	39342787	39349040	chr21:39342787-39349040	0	-	39347466	39348917	789624	7	372,129,100,48,30,33,138,	0,2358,4591,5504,5634,5757,6115,
#Partially deleted in new
chr21	39342799	39348862	chr21:39342799-39348862	0	-	39342799	39342799	8553170	6	360,129,129,48,30,318,	0,2346,3030,5492,5622,5745,
#Partially deleted in new
chr21	39342803	39348623	chr21:39342803-39348623	0	-	39342803	39342803	8553170	7	356,129,46,105,48,30,79,	0,2342,4443,4575,5488,5618,5741,
#Partially deleted in new
chr21	39342878	39349647	chr21:39342878-39349647	1	-	39343111	39349522	789624	6	281,129,48,30,33,188,	0,2267,5413,5543,5666,6581,
#Partially deleted in new
chr21	39342908	39348597	chr21:39342908-39348597	0	-	39342908	39342908	8553170	7	251,129,129,105,48,30,53,	0,2237,2921,4470,5383,5513,5636,
#Partially deleted in new
chr21	39342977	39348339	chr21:39342977-39348339	0	-	39342977	39342977	8553170	4	182,129,46,48,	0,2168,4269,5314,
#Partially deleted in new
chr21	39343008	39349054	chr21:39343008-39349054	0	-	39347474	39348917	789624	9	151,129,129,46,105,48,30,33,152,	0,2137,2821,4238,4370,5283,5413,5536,5894,
#Partially deleted in new
chr21	39343136	39349054	chr21:39343136-39349054	0	-	39343136	39343136	8553170	5	23,129,48,156,152,	0,2009,5155,5285,5766,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	39344536	39344628	chr21:39344536-39344628	3	+	39344536	39344536	8553170	1	92,	0,
#Deleted in new
chr21	39347146	39349067	chr21:39347146-39349067	0	-	39347146	39347146	8553170	6	146,105,48,30,33,165,	0,232,1145,1275,1398,1756,
#Deleted in new
chr21	39347335	39349015	chr21:39347335-39349015	0	-	39347335	39347335	8553170	5	617,48,30,33,113,	0,956,1086,1209,1567,
#Deleted in new
chr21	39347491	39348620	chr21:39347491-39348620	0	-	39347491	39347491	8553170	4	461,48,30,76,	0,800,930,1053,
#Deleted in new
chr21	39347994	39349020	chr21:39347994-39349020	0	-	39347994	39347994	8553170	2	583,118,	0,908,
#Deleted in new
chr21	39348064	39349054	chr21:39348064-39349054	0	-	39348064	39348064	8553170	3	275,156,152,	0,357,838,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	39373762	39377066	chr21:39373762-39377066	7	-	39373762	39373762	16724991	5	656,156,251,252,469,	0,980,1517,2071,2835,
#Partially deleted in new
chr21	39377697	39406615	chr21:39377697-39406615	1	+	39390697	39405984	789624	5	127,166,68,115,702,	0,13000,14071,15468,28216,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	39379538	39397887	chr21:39379538-39397887	1	+	39393174	39396939	8553170	4	232,68,115,1022,	0,12230,13627,17327,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	39379570	39397743	chr21:39379570-39397743	1	+	39390697	39396939	8553170	5	200,166,68,115,878,	0,11127,12198,13595,17295,
#Partially deleted in new
chr21	39380243	39397889	chr21:39380243-39397889	1	+	39380384	39396939	789624	5	243,166,68,115,1024,	0,10454,11525,12922,16622,
#Partially deleted in new
chr21	39380325	39397889	chr21:39380325-39397889	1	+	39380384	39396939	8553170	5	161,166,68,115,1024,	0,10372,11443,12840,16540,
#Partially deleted in new
chr21	39380331	39515506	chr21:39380331-39515506	3	+	39380384	39511775	789624	9	155,166,68,186,81,93,30,130,419,	0,10366,11437,82043,94803,119491,128666,131348,134756,
#Partially deleted in new
chr21	39380348	39515321	chr21:39380348-39515321	0	+	39380384	39405984	8553170	14	138,166,68,115,145,170,94,275,186,81,93,30,130,234,	0,10349,11420,12817,25565,26213,30495,45411,82026,94786,119474,128649,131331,134739,
#Partially deleted in new
chr21	39380353	39414288	chr21:39380353-39414288	0	+	39380384	39406629	789624	9	133,166,68,115,170,125,72,94,449,	0,10344,11415,12812,26208,27439,28252,30490,33486,
#Partially deleted in new
chr21	39380367	39428481	chr21:39380367-39428481	0	+	39380384	39390907	789624	9	119,779,68,115,385,170,94,275,250,	0,10330,11401,12798,25546,26194,30476,45392,47864,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr21	39380371	39415390	chr21:39380371-39415390	2	+	39380384	39390907	789624	9	115,222,68,115,818,125,72,94,1518,	0,10326,11397,12794,25542,27421,28234,30472,33501,
#Partially deleted in new
chr21	39380393	39392046	chr21:39380393-39392046	0	+	39380393	39380393	8553170	3	93,166,278,	0,10304,11375,
#Partially deleted in new
chr21	39380413	39391205	chr21:39380413-39391205	0	+	39380413	39380413	8553170	2	73,508,	0,10284,
#Partially deleted in new
chr21	39380413	39397485	chr21:39380413-39397485	0	+	39390697	39391468	8553170	6	73,166,250,68,115,620,	0,10284,10813,11355,12752,16452,
#Partially deleted in new
chr21	39380457	39397116	chr21:39380457-39397116	1	+	39390697	39396939	789624	5	99,166,68,115,251,	0,10240,11311,12708,16408,
#Partially deleted in new
chr21	39380477	39397888	chr21:39380477-39397888	0	+	39380477	39390907	8553170	5	9,222,68,115,1023,	0,10220,11291,12688,16388,
#Partially deleted in new
chr21	39380486	39390803	chr21:39380486-39390803	0	+	39390697	39390803	789624	2	435,106,	0,10211,
#Partially deleted in new
chr21	39386092	39393280	chr21:39386092-39393280	0	+	39390697	39393280	789624	4	419,166,68,115,	0,4605,5676,7073,
#Partially deleted in new
chr21	39387764	39397889	chr21:39387764-39397889	1	+	39390697	39396939	789624	5	91,166,68,115,1024,	0,2933,4004,5401,9101,
#Partially deleted in new
chr21	39387790	39397254	chr21:39387790-39397254	0	+	39390697	39390907	789624	5	65,779,68,115,389,	0,2907,3978,5375,9075,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr21	39390828	39428504	chr21:39390828-39428504	0	+	39390828	39405984	8553170	10	35,68,115,145,170,72,94,782,275,273,	0,940,2337,15085,15733,17777,20015,22981,34931,37403,
#Partially deleted in new
chr21	39390859	39428326	chr21:39390859-39428326	0	+	39390859	39390859	8553170	8	4,68,145,170,72,94,275,95,	0,909,15054,15702,17746,19984,34900,37372,
#Partially deleted in new
chr21	39392895	39397104	chr21:39392895-39397104	0	+	39392895	39392895	8553170	2	385,239,	0,3970,
#Partially deleted in new
chr21	39405843	39445777	chr21:39405843-39445777	3	-	39405881	39428493	789624	11	769,118,104,85,138,515,332,81,154,67,53,	0,4135,4420,5874,14862,17132,22328,23287,29576,38291,39881,
#Partially deleted in new
chr21	39405843	39428522	chr21:39405843-39428522	1	-	39405881	39428493	789624	7	769,118,104,85,138,515,351,	0,4135,4420,5874,14862,17132,22328,
#Partially deleted in new
chr21	39405859	39445733	chr21:39405859-39445733	1	-	39405881	39428493	789624	10	753,118,104,85,138,515,332,81,154,284,	0,4119,4404,5858,14846,17116,22312,23271,29560,39590,
#Partially deleted in new
chr21	39405977	39411147	chr21:39405977-39411147	0	-	39405977	39405977	8553170	4	635,118,104,115,	0,4001,4286,5055,
#Partially deleted in new
chr21	39410868	39428528	chr21:39410868-39428528	0	+	39410868	39410914	789624	2	69,297,	0,17363,
#Partially deleted in new
chr21	39411717	39445752	chr21:39411717-39445752	0	-	39411717	39411717	8553170	8	85,138,108,24,154,71,67,28,	0,8988,11258,17470,23702,24379,32417,34007,
#Partially deleted in new
chr21	39412417	39428500	chr21:39412417-39428500	0	+	39412417	39412417	8553170	4	1587,275,54,177,	0,13342,14381,15906,
#Partially deleted in new
chr21	39421559	39445777	chr21:39421559-39445777	1	-	39422945	39428493	789624	5	1931,332,81,154,53,	0,6612,7571,13860,24165,
#Partially deleted in new
chr21	39422411	39445805	chr21:39422411-39445805	0	-	39422411	39422411	8553170	4	1079,81,67,81,	0,6719,21723,23313,
#Partially deleted in new
chr21	39422987	39445761	chr21:39422987-39445761	0	-	39422987	39422987	8553170	4	503,81,154,37,	0,6143,12432,22737,
#Partially deleted in new
chr21	39423239	39445775	chr21:39423239-39445775	0	-	39423239	39423239	8553170	7	251,147,81,154,67,102,51,	0,4519,5891,12180,20895,21404,22485,
#Partially deleted in new
chr21	39423244	39445760	chr21:39423244-39445760	0	-	39423244	39428493	789624	6	246,332,81,123,67,36,	0,4927,5886,12175,20890,22480,
#Partially deleted in new
chr21	39423419	39445733	chr21:39423419-39445733	0	-	39423419	39423419	8553170	5	71,264,123,67,284,	0,5711,12000,20715,22030,
#Partially deleted in new
chr21	39425870	39428528	chr21:39425870-39428528	0	+	39425870	39425870	8553170	2	164,297,	0,2361,
#Partially deleted in new
chr21	39425918	39428528	chr21:39425918-39428528	0	+	39425918	39425918	8553170	2	116,205,	0,2405,
#Partially deleted in new
chr21	39428171	39445778	chr21:39428171-39445778	0	-	39428171	39428493	789624	4	332,264,154,54,	0,959,7248,17553,
#Partially deleted in new
chr21	39428207	39445803	chr21:39428207-39445803	0	-	39428207	39428493	789624	4	296,81,67,79,	0,923,15927,17517,
#Partially deleted in new
chr21	39428209	39445719	chr21:39428209-39445719	0	-	39428209	39428493	789624	6	294,81,35,67,102,270,	0,921,10474,15925,16434,17240,
#Partially deleted in new
chr21	39428214	39445733	chr21:39428214-39445733	0	-	39428214	39428493	789624	4	289,81,154,284,	0,916,7205,17235,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	39428221	39438936	chr21:39428221-39438936	0	-	39428221	39428221	8553170	3	282,81,253,	0,909,10462,
#Partially deleted in new
chr21	39428284	39445769	chr21:39428284-39445769	0	-	39428284	39428493	789624	6	219,81,154,140,67,45,	0,846,7135,11349,15850,17440,
#Partially deleted in new
chr21	39428304	39445769	chr21:39428304-39445769	0	-	39428304	39428493	789624	6	199,81,154,71,140,45,	0,826,7115,7792,11329,17420,
#Partially deleted in new
chr21	39428401	39445780	chr21:39428401-39445780	0	-	39428401	39428493	789624	5	102,264,123,67,56,	0,729,7018,15733,17323,
#Partially deleted in new
chr21	39428461	39445752	chr21:39428461-39445752	0	-	39428461	39428493	789624	6	42,264,154,67,102,28,	0,669,6958,15673,16182,17263,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	39443458	39445753	chr21:39443458-39445753	0	-	39443458	39443458	8553170	2	743,29,	0,2266,
#Partially deleted in new
chr21	39445854	39515506	chr21:39445854-39515506	1	+	39462473	39511775	789624	7	75,186,81,93,30,130,419,	0,16520,29280,53968,63143,65825,69233,
#Partially deleted in new
chr21	39445864	39515355	chr21:39445864-39515355	1	+	39462473	39511775	789624	7	28,186,81,93,30,130,268,	0,16510,29270,53958,63133,65815,69223,
#Partially deleted in new
chr21	39445874	39515270	chr21:39445874-39515270	1	+	39462473	39511775	789624	6	207,181,81,30,130,183,	0,16505,29260,63123,65805,69213,
#Partially deleted in new
chr21	39445930	39511706	chr21:39445930-39511706	0	+	39462473	39511706	789624	6	168,186,81,93,30,27,	0,16444,29204,53892,63067,65749,
#Partially deleted in new
chr21	39445941	39515207	chr21:39445941-39515207	1	+	39462473	39511775	789624	7	140,186,81,93,30,130,120,	0,16433,29193,53881,63056,65738,69146,
#Deleted in new
chr21	39447009	39447069	chr21:39447009-39447069	3	+	39447009	39447009	5263520	1	60,	0,
#Partially deleted in new
chr21	39451829	39515506	chr21:39451829-39515506	3	+	39451907	39511775	789624	7	312,186,81,93,30,130,419,	0,10545,23305,47993,57168,59850,63258,
#Partially deleted in new
chr21	39452122	39515506	chr21:39452122-39515506	0	+	39452122	39511775	789624	6	19,186,81,30,130,419,	0,10252,23012,56875,59557,62965,
#Partially deleted in new
chr21	39462533	39511775	chr21:39462533-39511775	0	+	39462533	39511775	789624	4	27,93,30,96,	0,37289,46464,49146,
#Deleted in new
chr21	39488326	39488760	chr21:39488326-39488760	7	+	39488326	39488326	16724991	1	434,	0,
#Deleted in new
chr21	39491543	39491898	chr21:39491543-39491898	7	-	39491543	39491543	16724991	1	355,	0,
#Partially deleted in new
chr21	39499822	39515506	chr21:39499822-39515506	0	+	39499822	39515159	789624	2	93,419,	0,15265,
#Partially deleted in new
chr21	39525582	39529855	chr21:39525582-39529855	7	+	39525582	39525582	16724991	2	483,3497,	0,776,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	39556441	39673137	chr21:39556441-39673137	3	+	39660559	39661492	789624	5	69,132,231,160,12578,	0,48652,89950,103311,104118,
#Partially deleted in new
chr21	39556483	39563584	chr21:39556483-39563584	0	+	39556483	39556483	8553170	2	27,631,	0,6470,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	39597146	39612441	chr21:39597146-39612441	0	-	39597146	39597146	789624	3	843,83,145,	0,12436,15150,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	39597146	39599656	chr21:39597146-39599656	1	-	39597146	39597146	8553170	2	843,316,	0,2194,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	39605598	39612821	chr21:39605598-39612821	3	-	39605598	39605598	789624	3	749,83,525,	0,3984,6698,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	39605598	39612441	chr21:39605598-39612441	0	-	39605598	39605598	8553170	3	404,83,145,	0,3984,6698,
#Partially deleted in new
chr21	39612939	39662888	chr21:39612939-39662888	1	+	39660559	39661492	789624	3	128,160,2329,	0,46813,47620,
#Partially deleted in new
chr21	39630270	39726085	chr21:39630270-39726085	3	+	39630270	39630270	8553170	3	220,76,248,	0,92205,95567,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	39657326	39662889	chr21:39657326-39662889	1	+	39660559	39661492	789624	3	273,160,2330,	0,2426,3233,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	39657776	39662888	chr21:39657776-39662888	1	+	39660559	39661492	789624	3	117,160,2329,	0,1976,2783,
#Partially deleted in new
chr21	39657881	39662888	chr21:39657881-39662888	1	+	39657881	39661492	789624	2	12,2329,	0,2678,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	39727754	39730680	chr21:39727754-39730680	3	+	39727754	39727754	8553170	3	238,127,1177,	0,1378,1749,
#Partially deleted in new
chr21	39727845	39729684	chr21:39727845-39729684	0	+	39727845	39727845	8553170	2	147,552,	0,1287,
#Partially deleted in new
chr21	39751171	39788188	chr21:39751171-39788188	0	+	39751171	39751171	8553170	5	206,318,300,216,22,	0,14363,19744,27918,36995,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	39791629	39801435	chr21:39791629-39801435	0	+	39791629	39791629	8553170	3	470,80,174,	0,1904,9632,
#Partially deleted in new
chr21	39867316	39929397	chr21:39867316-39929397	3	+	39867501	39929111	0	3	194,52,414,	0,31159,61667,
#Partially deleted in new
chr21	39867438	39929397	chr21:39867438-39929397	0	+	39867501	39926081	789624	4	72,52,145,414,	0,31037,58608,61545,
#Partially deleted in new
chr21	39867450	39929397	chr21:39867450-39929397	0	+	39867450	39867450	8553170	4	60,180,52,414,	0,16002,31025,61533,
#Partially deleted in new
chr21	39898475	39929397	chr21:39898475-39929397	0	+	39898475	39898475	8553170	3	52,121,414,	0,17590,30508,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr21	40010998	40847139	chr21:40010998-40847139	3	-	40013033	40846661	789624	33	2388,303,198,150,116,31,177,291,189,99,164,118,154,134,156,147,241,71,168,129,97,197,174,120,279,276,297,276,279,147,147,318,521,	0,31372,33079,40959,44726,51870,64038,67688,69153,72909,74603,76171,82722,113196,122855,131559,133492,156219,167928,176132,176892,178043,265098,285056,301082,327102,328120,336671,342466,358100,681811,697455,835620,
#Partially deleted in new
chr21	40012413	40369270	chr21:40012413-40369270	1	-	40013033	40369258	789624	30	973,303,198,150,116,31,177,291,189,99,164,118,154,134,156,147,241,71,168,129,97,197,174,120,279,276,297,276,279,172,	0,29957,31664,39544,43311,50455,62623,66273,67738,71494,73188,74756,81307,111781,121440,130144,132077,154804,166513,174717,175477,176628,263683,283641,299667,325687,326705,335256,341051,356685,
#Partially deleted in new
chr21	40012900	40353654	chr21:40012900-40353654	0	-	40013033	40353654	789624	29	432,303,198,150,116,31,177,291,189,99,164,118,154,134,156,147,241,71,168,129,97,197,174,120,279,276,297,276,190,	0,29470,31177,39057,42824,49968,62136,65786,67251,71007,72701,74269,80820,111294,120953,129657,131590,154317,166026,174230,174990,176141,263196,283154,299180,325200,326218,334769,340564,
#Deleted in new
chr21	40212351	40212431	chr21:40212351-40212431	3	-	40212351	40212351	5263520	1	80,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	40383082	40385358	chr21:40383082-40385358	0	+	40383082	40383082	789624	3	326,79,780,	0,423,1496,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	40383082	40385358	chr21:40383082-40385358	3	+	40383082	40383082	789624	3	373,487,780,	0,569,1496,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	40383082	40385358	chr21:40383082-40385358	0	+	40383082	40383082	789624	2	373,780,	0,1496,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	40383082	40385358	chr21:40383082-40385358	0	+	40383082	40383082	789624	2	502,780,	0,1496,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	40513143	40513279	chr21:40513143-40513279	3	+	40513143	40513143	8553170	1	136,	0,
#Partially deleted in new
chr21	40615377	40630767	chr21:40615377-40630767	0	-	40615377	40615377	8553170	4	106,146,102,110,	0,5877,14162,15280,
#Partially deleted in new
chr21	40618506	40630767	chr21:40618506-40630767	3	-	40618506	40618506	5263520	4	362,146,102,110,	0,2748,11033,12151,
#Partially deleted in new
chr21	40863993	40864473	chr21:40863993-40864473	7	+	40863993	40863993	16724991	1	480,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	41141492	41148133	chr21:41141492-41148133	3	-	41141492	41141492	5263520	2	1923,172,	0,6469,
#Partially deleted in new
chr21	41143141	41147423	chr21:41143141-41147423	0	-	41143141	41143141	8553170	2	274,75,	0,4207,
#Partially deleted in new
chr21	41143179	41147433	chr21:41143179-41147433	1	-	41143179	41143179	8553170	3	236,259,85,	0,1897,4169,
#Deleted in new
chr21	41167556	41167629	chr21:41167556-41167629	3	+	41167556	41167556	5263520	1	73,	0,
#Partially deleted in new
chr21	41167800	41276597	chr21:41167800-41276597	1	+	41168263	41275427	0	8	775,89,217,129,135,102,150,1227,	0,58465,69712,74018,75575,78161,82951,107570,
#Partially deleted in new
chr21	41167800	41276597	chr21:41167800-41276597	3	+	41168263	41275624	0	9	775,89,217,129,135,102,150,169,1227,	0,58465,69712,74018,75575,78161,82951,89357,107570,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr21	41167800	41282518	chr21:41167800-41282518	1	+	41168263	41275624	0	8	775,89,217,129,135,102,169,7148,	0,58465,69712,74018,75575,78161,89357,107570,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	41175230	41180818	chr21:41175230-41180818	0	-	41175230	41175230	8553170	1	5588,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	41175230	41185239	chr21:41175230-41185239	1	-	41175230	41175230	789624	1	10009,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	41176321	41186773	chr21:41176321-41186773	3	-	41176321	41176321	8553170	3	465,220,326,	0,9801,10126,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	41180096	41180626	chr21:41180096-41180626	3	+	41180096	41180096	8553170	2	188,194,	0,336,
#Partially deleted in new
chr21	41225475	41241839	chr21:41225475-41241839	0	+	41225475	41225475	8553170	4	220,89,217,21,	0,790,12037,16343,
#Partially deleted in new
chr21	41226265	41275381	chr21:41226265-41275381	0	+	41226265	41226265	8553170	8	89,217,121,135,102,150,169,11,	0,11247,15553,17110,19696,24486,30892,49105,
#Partially deleted in new
chr21	41226302	41246271	chr21:41226302-41246271	0	+	41226302	41226302	8553170	5	52,217,129,135,310,	0,11210,15516,17073,19659,
#Partially deleted in new
chr21	41230117	41276597	chr21:41230117-41276597	0	+	41230117	41230117	8553170	8	106,217,129,135,102,150,169,1227,	0,7395,11701,13258,15844,20634,27040,45253,
#Partially deleted in new
chr21	41236627	41257326	chr21:41236627-41257326	0	+	41236627	41236627	8553170	7	37,217,129,135,102,150,169,	0,885,5191,6748,9334,14124,20530,
#Partially deleted in new
chr21	41241744	41275624	chr21:41241744-41275624	0	+	41241744	41241744	8553170	6	203,135,102,150,169,254,	0,1631,4217,9007,15413,33626,
#Partially deleted in new
chr21	41252464	41257326	chr21:41252464-41257326	0	+	41252464	41252464	8553170	2	60,169,	0,4693,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr21	41304211	41357431	chr21:41304211-41357431	0	+	41304211	41304211	8553170	10	99,1521,144,124,59,51,199,88,133,324,	0,15246,18711,34166,40264,41474,41997,42801,44380,52896,
#Partially deleted in new
chr21	41304249	41346349	chr21:41304249-41346349	0	+	41304249	41304249	8553170	5	61,144,124,59,664,	0,18673,34128,40226,41436,
#Partially deleted in new
chr21	41316733	41357431	chr21:41316733-41357431	3	+	41316879	41357197	789624	8	165,144,124,59,51,88,133,324,	0,6189,21644,27742,28952,30279,31858,40374,
#Partially deleted in new
chr21	41316813	41357431	chr21:41316813-41357431	1	+	41316879	41357197	789624	7	85,124,59,51,88,133,324,	0,21564,27662,28872,30199,31778,40294,
#Partially deleted in new
chr21	41316813	41357431	chr21:41316813-41357431	1	+	41316879	41357197	789624	9	85,117,144,124,59,51,88,133,324,	0,5774,6109,21564,27662,28872,30199,31778,40294,
#Partially deleted in new
chr21	41322819	41357431	chr21:41322819-41357431	1	+	41322834	41357197	789624	7	247,124,59,51,88,133,324,	0,15558,21656,22866,24193,25772,34288,
#Partially deleted in new
chr21	41361942	41408943	chr21:41361942-41408943	3	+	41376906	41408233	0	14	113,320,193,135,155,139,199,79,123,142,159,77,255,953,	0,14893,15846,18074,20467,28622,33644,35670,36954,37253,40027,41324,44801,46048,
#Partially deleted in new
chr21	41361998	41377927	chr21:41361998-41377927	0	+	41376906	41377927	789624	4	57,66,320,139,	0,10935,14837,15790,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	41362006	41377916	chr21:41362006-41377916	0	+	41376906	41377916	789624	4	49,121,320,128,	0,1262,14829,15782,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	41362026	41364666	chr21:41362026-41364666	0	+	41362026	41362026	8553170	3	29,148,263,	0,1242,2377,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	41362029	41367306	chr21:41362029-41367306	0	+	41362029	41362029	8553170	2	26,4038,	0,1239,
#Partially deleted in new
chr21	41370212	41376949	chr21:41370212-41376949	0	+	41376906	41376949	789624	4	433,66,230,114,	0,2721,3685,6623,
#Partially deleted in new
chr21	41370513	41377940	chr21:41370513-41377940	0	+	41376906	41377940	789624	3	132,320,152,	0,6322,7275,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr21	41389542	41409390	chr21:41389542-41409390	0	+	41389542	41389542	8553170	9	1161,199,79,123,142,159,77,255,1400,	0,6044,8070,9354,9653,12427,13724,17201,18448,
#Partially deleted in new
chr21	41390650	41402200	chr21:41390650-41402200	0	+	41390650	41390650	8553170	6	53,199,79,123,142,231,	0,4936,6962,8246,8545,11319,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	41397630	41399766	chr21:41397630-41399766	0	+	41397630	41397630	8553170	3	61,123,571,	0,1266,1565,
#Partially deleted in new
chr21	41398984	41408026	chr21:41398984-41408026	0	+	41398984	41398984	8553170	5	35,159,77,255,36,	0,2985,4282,7759,9006,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	41400864	41404873	chr21:41400864-41404873	0	+	41400864	41400864	8553170	2	1264,1607,	0,2402,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	41402633	41408943	chr21:41402633-41408943	0	+	41402633	41402633	8553170	3	1003,255,953,	0,4110,5357,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	41420303	41427866	chr21:41420303-41427866	0	+	41420303	41420303	8553170	5	137,258,156,99,112,	0,1534,2452,6902,7451,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	41420365	41423277	chr21:41420365-41423277	0	+	41420365	41420365	8553170	4	75,34,121,522,	0,1472,1609,2390,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr21	41420514	41459214	chr21:41420514-41459214	3	+	41432070	41458758	0	19	303,258,156,99,112,76,126,193,138,155,139,199,79,123,142,159,77,249,687,	0,1323,2241,6691,7240,10018,11535,15322,16500,19179,20372,21201,23273,24933,25485,28622,30652,32106,38013,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr21	41421328	41435935	chr21:41421328-41435935	0	+	41432070	41435935	789624	9	45,34,121,156,99,112,76,145,99,	0,509,646,1427,5877,6426,9204,10702,14508,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	41426030	41432147	chr21:41426030-41432147	0	+	41432070	41432147	789624	5	131,99,112,76,98,	0,1175,1724,4502,6019,
#Partially deleted in new
chr21	41426030	41459213	chr21:41426030-41459213	1	+	41432070	41458758	0	15	233,112,126,193,138,155,139,199,79,123,142,159,77,249,686,	0,1724,6019,9806,10984,13663,14856,15685,17757,19417,19969,23106,25136,26590,32497,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr21	41426166	41459214	chr21:41426166-41459214	1	+	41432070	41458758	0	17	97,99,112,76,126,193,138,155,139,199,79,123,142,159,77,249,687,	0,1039,1588,4366,5883,9670,10848,13527,14720,15549,17621,19281,19833,22970,25000,26454,32361,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	41426177	41439848	chr21:41426177-41439848	0	+	41432070	41439848	789624	7	86,112,76,145,193,138,155,	0,1577,4355,5853,9659,10837,13516,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	41426191	41428070	chr21:41426191-41428070	0	+	41426191	41426191	8553170	2	72,316,	0,1563,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr21	41426204	41440899	chr21:41426204-41440899	0	+	41432070	41440899	789624	8	59,112,76,126,193,138,155,13,	0,1550,4328,5845,9632,10810,13489,14682,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	41426240	41435964	chr21:41426240-41435964	0	+	41432070	41435964	789624	6	23,99,112,76,145,128,	0,965,1514,4292,5790,9596,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	41426269	41429921	chr21:41426269-41429921	0	+	41426269	41426269	8553170	2	1035,2167,	0,1485,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	41429480	41432175	chr21:41429480-41432175	0	+	41432070	41432175	789624	3	79,76,126,	0,1052,2569,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr21	41431713	41459214	chr21:41431713-41459214	1	+	41432070	41458758	789624	13	462,124,138,155,139,199,79,123,142,159,77,249,687,	0,4123,5301,7980,9173,10002,12074,13734,14286,17423,19453,20907,26814,
#Partially deleted in new
chr21	41432049	41459213	chr21:41432049-41459213	1	+	41432070	41458781	0	10	126,193,138,155,139,199,79,123,142,686,	0,3787,4965,7644,8837,9666,11738,13398,13950,26478,
#Partially deleted in new
chr21	41441055	41445708	chr21:41441055-41445708	3	-	41441055	41441055	8553170	3	815,82,219,	0,1609,4434,
#Partially deleted in new
chr21	41443478	41445486	chr21:41443478-41445486	0	+	41443478	41443478	8553170	2	388,39,	0,1969,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	41445469	41449785	chr21:41445469-41449785	0	+	41445469	41445469	8553170	3	101,142,649,	0,530,3667,
#Partially deleted in new
chr21	41450927	41452820	chr21:41450927-41452820	0	+	41450927	41450927	8553170	2	316,200,	0,1693,
#Partially deleted in new
chr21	41464550	41508159	chr21:41464550-41508159	3	-	41466141	41498133	789624	14	1603,153,143,96,176,172,44,111,127,120,87,223,71,79,	0,3183,3845,6097,7255,8774,12026,14621,15925,23843,24956,29805,33568,43530,
#Partially deleted in new
chr21	41464552	41508065	chr21:41464552-41508065	1	-	41466141	41508004	789624	14	1601,153,143,96,176,172,44,111,127,120,87,223,71,116,	0,3181,3843,6095,7253,8772,12024,14619,15923,23841,24954,29803,33566,43397,
#Partially deleted in new
chr21	41465889	41468102	chr21:41465889-41468102	0	-	41465889	41465889	8553170	2	264,369,	0,1844,
#Partially deleted in new
chr21	41466008	41507982	chr21:41466008-41507982	1	-	41466141	41498133	789624	14	145,153,143,96,176,172,44,111,127,120,87,223,71,33,	0,1725,2387,4639,5797,7316,10568,13163,14467,22385,23498,28347,32110,41941,
#Partially deleted in new
chr21	41467733	41531116	chr21:41467733-41531116	0	-	41467733	41498133	789624	14	153,143,96,176,172,44,111,127,120,87,223,71,246,132,	0,662,2914,4072,5591,8843,11438,12742,20660,21773,26622,30385,62239,63251,
#Deleted in new
chr21	41467765	41468837	chr21:41467765-41468837	0	-	41467765	41467765	8553170	2	121,442,	0,630,
#Partially deleted in new
chr21	41473445	41508092	chr21:41473445-41508092	0	-	41473445	41498133	789624	8	51,44,111,127,87,223,71,12,	0,3131,5726,7030,16061,20910,24673,34635,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	41486466	41508158	chr21:41486466-41508158	0	-	41486466	41486466	8553170	3	1559,71,78,	0,11652,21614,
#Partially deleted in new
chr21	41488488	41508114	chr21:41488488-41508114	0	-	41488488	41488488	8553170	4	25,87,71,34,	0,1018,9630,19592,
#Partially deleted in new
chr21	41494355	41506604	chr21:41494355-41506604	0	-	41494355	41498133	789624	3	223,71,160,	0,3763,12089,
#Deleted in new
chr21	41529788	41531098	chr21:41529788-41531098	0	-	41529788	41529788	8553170	2	430,114,	0,1196,
#Deleted in new
chr21	41539205	41539326	chr21:41539205-41539326	3	+	41539205	41539205	8553170	1	121,	0,
#Partially deleted in new
chr21	41559124	41562958	chr21:41559124-41562958	3	-	41559124	41559124	8553170	3	249,121,52,	0,1207,3782,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	41576134	41581319	chr21:41576134-41581319	3	-	41576134	41576134	8553170	2	291,55,	0,5130,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	41711519	41715775	chr21:41711519-41715775	3	-	41711519	41711519	789624	6	1481,122,113,119,164,34,	0,2031,2500,2714,3600,4222,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	41712156	41714055	chr21:41712156-41714055	0	-	41712156	41712156	8553170	4	217,185,122,36,	0,659,1394,1863,
#Partially deleted in new
chr21	41712855	41715753	chr21:41712855-41715753	0	-	41712855	41712855	8553170	3	116,164,12,	0,2264,2886,
#Partially deleted in new
chr21	41712855	41715753	chr21:41712855-41715753	1	-	41712855	41712855	8553170	7	145,122,81,113,81,164,12,	0,695,1000,1164,1378,2264,2886,
#Partially deleted in new
chr21	41716435	41717580	chr21:41716435-41717580	3	+	41716435	41716435	789624	3	109,174,239,	0,565,906,
#Partially deleted in new
chr21	41739368	41767106	chr21:41739368-41767106	3	-	41740837	41767041	789624	8	2629,259,104,159,50,149,292,247,	0,4513,6390,7244,9785,11728,17156,27491,
#Partially deleted in new
chr21	41739368	41767089	chr21:41739368-41767089	1	-	41740837	41767041	789624	9	2629,259,146,102,159,50,149,292,230,	0,4513,6390,6701,7244,9785,11728,17156,27491,
#Deleted in new
chr21	41739372	41741308	chr21:41739372-41741308	3	+	41739372	41739372	8553170	2	299,162,	0,1774,
#Deleted in new
chr21	41746771	41746841	chr21:41746771-41746841	3	-	41746771	41746771	5263520	1	70,	0,
#Partially deleted in new
chr21	41798224	41879473	chr21:41798224-41879473	1	-	41801239	41879371	789624	24	3498,210,81,176,84,132,120,80,164,135,132,95,168,88,95,182,130,231,102,253,154,94,46,204,	0,4487,6309,11929,12528,17480,21357,21870,22842,23678,25093,27735,29941,37212,37888,38243,39709,41398,48865,56341,58951,61367,62102,81045,
#Partially deleted in new
chr21	41798224	41879473	chr21:41798224-41879473	1	-	41801239	41879371	789624	25	3498,210,81,176,84,132,120,80,164,135,132,95,168,60,88,95,182,130,231,102,253,154,94,46,204,	0,4487,6309,11929,12528,17480,21357,21870,22842,23678,25093,27735,29941,36280,37212,37888,38243,39709,41398,48865,56341,58951,61367,62102,81045,
#Partially deleted in new
chr21	41798224	41879482	chr21:41798224-41879482	0	-	41801239	41879371	789624	33	272,161,1539,210,81,176,84,132,120,80,164,135,132,95,168,88,95,182,130,231,102,253,154,198,94,46,189,83,78,128,166,145,213,	0,358,1959,4487,6309,11929,12528,17480,21357,21870,22842,23678,25093,27735,29941,37212,37888,38243,39709,41398,48865,56341,58951,60806,61367,62102,63338,63700,69075,73269,80470,80771,81045,
#Partially deleted in new
chr21	41798224	41879473	chr21:41798224-41879473	0	-	41826039	41860363	789624	24	3498,210,81,176,84,132,120,80,164,135,132,95,116,88,95,122,130,231,102,253,154,94,46,204,	0,4487,6309,11929,12528,17480,21357,21870,22842,23678,25093,27735,29941,37212,37888,38243,39709,41398,48865,56341,58951,61367,62102,81045,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr21	41798224	41863302	chr21:41798224-41863302	0	-	41801239	41860363	789624	26	272,161,1539,210,81,176,84,132,120,80,164,135,132,95,168,88,95,182,130,231,102,253,154,94,46,68,	0,358,1959,4487,6309,11929,12528,17480,21357,21870,22842,23678,25093,27735,29941,37212,37888,38243,39709,41398,48865,56341,58951,61367,62102,65010,
#Partially deleted in new
chr21	41798224	41879473	chr21:41798224-41879473	0	-	41826039	41879371	789624	25	3498,210,81,176,84,132,120,80,164,135,132,95,116,60,88,95,182,130,231,102,253,154,94,46,204,	0,4487,6309,11929,12528,17480,21357,21870,22842,23678,25093,27735,29941,36280,37212,37888,38243,39709,41398,48865,56341,58951,61367,62102,81045,
#Partially deleted in new
chr21	41798224	41810466	chr21:41798224-41810466	0	-	41798224	41798224	8553170	7	272,161,517,729,210,81,313,	0,358,1959,2769,4487,6309,11929,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	41798224	41814962	chr21:41798224-41814962	0	-	41798224	41798224	8553170	6	272,161,1539,210,81,4809,	0,358,1959,4487,6309,11929,
#Partially deleted in new
chr21	41798226	41860378	chr21:41798226-41860378	1	-	41801239	41860363	789624	25	270,161,1539,210,81,176,84,132,120,80,164,135,132,95,168,88,95,182,130,231,102,253,154,94,52,	0,356,1957,4485,6307,11927,12526,17478,21355,21868,22840,23676,25091,27733,29939,37210,37886,38241,39707,41396,48863,56339,58949,61365,62100,
#Partially deleted in new
chr21	41800993	41879482	chr21:41800993-41879482	3	-	41801239	41879371	789624	31	729,210,81,176,84,132,120,80,164,135,132,95,168,88,95,182,130,231,102,253,154,198,94,46,189,83,78,128,166,145,213,	0,1718,3540,9160,9759,14711,18588,19101,20073,20909,22324,24966,27172,34443,35119,35474,36940,38629,46096,53572,56182,58037,58598,59333,60569,60931,66306,70500,77701,78002,78276,
#Deleted in new
chr21	41801627	41803118	chr21:41801627-41803118	0	-	41801627	41801627	8553170	2	95,407,	0,1084,
#Partially deleted in new
chr21	41801656	41804723	chr21:41801656-41804723	0	-	41801656	41801656	8553170	3	66,210,190,	0,1055,2877,
#Partially deleted in new
chr21	41802893	41819783	chr21:41802893-41819783	0	-	41802893	41802893	8553170	6	28,81,176,84,132,202,	0,1640,7260,7859,12811,16688,
#Partially deleted in new
chr21	41821190	41835518	chr21:41821190-41835518	0	-	41821190	41821190	8553170	5	40,135,95,168,82,	0,712,4769,6975,14246,
#Partially deleted in new
chr21	41825976	41836894	chr21:41825976-41836894	0	-	41825976	41825976	8553170	5	78,168,88,95,427,	0,2189,9460,10136,10491,
#Partially deleted in new
chr21	41828320	41836932	chr21:41828320-41836932	0	-	41828320	41828320	8553170	5	13,88,95,182,57,	0,7116,7792,8147,8555,
#Deleted in new
chr21	41870632	41872054	chr21:41870632-41872054	3	+	41870632	41870632	8553170	2	267,320,	0,1102,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	41874755	41877613	chr21:41874755-41877613	3	-	41874755	41874755	8553170	3	279,88,80,	0,2516,2778,
#Deleted in new
chr21	41882204	41882300	chr21:41882204-41882300	3	+	41882204	41882204	8553170	1	96,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr21	41885111	41926690	chr21:41885111-41926690	1	-	41889123	41921998	789624	13	4233,310,128,114,175,125,65,109,124,123,105,114,119,	0,13941,16510,20612,21880,22548,24347,27220,29486,32993,33744,36860,41460,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr21	41885111	41953890	chr21:41885111-41953890	3	-	41889123	41953648	789624	14	4233,310,128,114,175,125,65,109,124,123,105,114,99,521,	0,13941,16510,20612,21880,22548,24347,27220,29486,32993,33744,36860,57035,68258,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	41885111	41901652	chr21:41885111-41901652	0	-	41889123	41901652	789624	3	4233,295,31,	0,13941,16510,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr21	41886672	41919033	chr21:41886672-41919033	0	-	41886672	41886672	8553170	11	2672,310,128,114,175,125,65,109,124,123,178,	0,12380,14949,19051,20319,20987,22786,25659,27925,31432,32183,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	41886672	41908802	chr21:41886672-41908802	0	-	41886672	41886672	8553170	6	2672,310,128,114,175,1143,	0,12380,14949,19051,20319,20987,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr21	41900952	41926672	chr21:41900952-41926672	0	-	41900952	41900952	8553170	11	797,114,175,125,65,109,124,123,105,114,101,	0,4771,6039,6707,8506,11379,13645,17152,17903,21019,25619,
#Partially deleted in new
chr21	41912159	41942160	chr21:41912159-41942160	0	-	41912159	41912159	8553170	6	281,124,123,105,114,14,	0,2438,5945,6696,9812,29987,
#Deleted in new
chr21	41952945	41953519	chr21:41952945-41953519	0	-	41952945	41952945	8553170	2	206,150,	0,424,
#Partially deleted in new
chr21	41986830	42010357	chr21:41986830-42010357	3	-	41990894	41994095	0	3	7278,65,106,	0,16066,23421,
#Partially deleted in new
chr21	41986830	42010357	chr21:41986830-42010357	1	-	41990894	41994095	0	4	5059,1616,65,106,	0,5662,16066,23421,
#Partially deleted in new
chr21	41988636	42010366	chr21:41988636-42010366	1	-	41990894	41994095	0	4	5472,154,65,115,	0,13713,14260,21615,
#Partially deleted in new
chr21	41988636	42010387	chr21:41988636-42010387	1	-	41990894	41994095	0	2	5472,136,	0,21615,
#Partially deleted in new
chr21	41991405	42010333	chr21:41991405-42010333	0	-	41991405	41991405	8553170	3	484,65,82,	0,11491,18846,
#Partially deleted in new
chr21	41993739	42008057	chr21:41993739-42008057	0	-	41993739	41994095	789624	2	369,238,	0,14080,
#Partially deleted in new
chr21	41993947	42010366	chr21:41993947-42010366	0	-	41993947	41994095	789624	4	161,214,65,115,	0,8402,8949,16304,
#Partially deleted in new
chr21	41993947	42010357	chr21:41993947-42010357	0	-	41993947	41994095	789624	4	161,65,131,106,	0,8949,15519,16304,
#Partially deleted in new
chr21	42009193	42024866	chr21:42009193-42024866	3	+	42009193	42009193	789624	2	391,561,	0,15112,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	42022022	42024866	chr21:42022022-42024866	0	+	42022022	42022022	789624	2	189,561,	0,2283,
#Partially deleted in new
chr21	42022266	42024924	chr21:42022266-42024924	1	+	42022266	42022266	789624	2	164,619,	0,2039,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr21	42062958	42143453	chr21:42062958-42143453	1	+	42076144	42137620	789624	23	256,243,162,122,187,141,255,113,220,138,242,205,258,113,214,138,320,146,237,160,85,203,1358,	0,13046,21125,22332,25335,27339,35967,39207,40909,46603,47921,48547,50614,52914,56152,58128,59872,63386,64047,64713,66754,74480,79137,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr21	42062958	42142995	chr21:42062958-42142995	1	+	42076144	42137620	789624	22	256,243,162,122,187,141,255,113,220,138,831,258,113,214,138,320,146,237,160,85,203,900,	0,13046,21125,22332,25335,27339,35967,39207,40909,46603,47921,50614,52914,56152,58128,59872,63386,64047,64713,66754,74480,79137,
#Partially deleted in new
chr21	42071316	42142995	chr21:42071316-42142995	1	+	42071316	42137620	789624	23	76,243,162,122,187,141,255,113,220,138,242,205,258,113,214,138,320,146,237,160,85,203,900,	0,4688,12767,13974,16977,18981,27609,30849,32551,38245,39563,40189,42256,44556,47794,49770,51514,55028,55689,56355,58396,66122,70779,
#Partially deleted in new
chr21	42071316	42142995	chr21:42071316-42142995	3	+	42071316	42137620	789624	22	76,243,162,122,187,141,255,113,220,138,831,258,113,214,138,320,146,237,160,85,203,900,	0,4688,12767,13974,16977,18981,27609,30849,32551,38245,39563,42256,44556,47794,49770,51514,55028,55689,56355,58396,66122,70779,
#Partially deleted in new
chr21	42085302	42104057	chr21:42085302-42104057	0	+	42085302	42101742	789624	7	110,187,141,255,110,113,190,	0,2991,4995,13623,16405,16863,18565,
#Partially deleted in new
chr21	42085302	42104057	chr21:42085302-42104057	0	+	42085302	42093956	789624	7	110,187,141,154,255,113,190,	0,2991,4995,8568,13623,16863,18565,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	42085302	42104057	chr21:42085302-42104057	0	+	42085302	42088415	789624	7	110,97,187,141,255,113,190,	0,1227,2991,4995,13623,16863,18565,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	42085302	42104057	chr21:42085302-42104057	0	+	42085302	42090423	789624	7	110,141,119,154,255,113,190,	0,4995,8101,8568,13623,16863,18565,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr21	42085302	42104057	chr21:42085302-42104057	0	+	42085302	42090423	789624	8	110,180,141,119,154,255,113,190,	0,2991,4995,8101,8568,13623,16863,18565,
#Partially deleted in new
chr21	42085302	42104057	chr21:42085302-42104057	0	+	42085302	42088462	789624	5	172,187,255,113,190,	0,2991,13623,16863,18565,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	42102133	42108534	chr21:42102133-42108534	3	-	42102133	42102133	789624	2	1902,239,	0,6162,
#Deleted in new
chr21	42111396	42115934	chr21:42111396-42115934	0	+	42111396	42111396	8553170	4	314,185,258,62,	0,1537,2176,4476,
#Partially deleted in new
chr21	42120518	42142995	chr21:42120518-42142995	0	+	42120518	42120518	8553170	9	433,138,320,146,237,160,85,203,900,	0,568,2312,5826,6487,7153,9194,16920,21577,
#Deleted in new
chr21	42120518	42126396	chr21:42120518-42126396	0	+	42120518	42120518	8553170	3	433,138,52,	0,568,5826,
#Partially deleted in new
chr21	42127677	42137631	chr21:42127677-42137631	0	+	42127677	42127677	8553170	4	154,142,85,193,	0,326,2035,9761,
#Partially deleted in new
chr21	42199688	42297244	chr21:42199688-42297244	1	+	42201675	42296392	789624	16	161,147,244,118,133,51,146,124,115,149,102,169,101,159,119,1081,	0,1888,25982,71381,73614,77206,82585,84871,86191,88200,88522,90361,91403,91809,94853,96475,
#Partially deleted in new
chr21	42219116	42284648	chr21:42219116-42284648	0	+	42219262	42284648	789624	6	188,244,118,133,146,89,	0,6554,51953,54186,63157,65443,
#Partially deleted in new
chr21	42219117	42297244	chr21:42219117-42297244	1	+	42219262	42296392	789624	15	187,244,118,133,51,146,124,115,185,102,169,101,159,119,1081,	0,6553,51952,54185,57777,63156,65442,66762,68771,69093,70932,71974,72380,75424,77046,
#Partially deleted in new
chr21	42219117	42297244	chr21:42219117-42297244	3	+	42219262	42296392	789624	15	187,244,118,133,51,146,124,115,149,102,169,101,159,119,1081,	0,6553,51952,54185,57777,63156,65442,66762,68771,69093,70932,71974,72380,75424,77046,
#Partially deleted in new
chr21	42219820	42297244	chr21:42219820-42297244	1	+	42219971	42296392	789624	15	226,244,118,133,51,146,124,115,149,102,169,101,159,119,1081,	0,5850,51249,53482,57074,62453,64739,66059,68068,68390,70229,71271,71677,74721,76343,
#Deleted in new
chr21	42221172	42221286	chr21:42221172-42221286	7	+	42221172	42221172	16724991	1	114,	0,
#Partially deleted in new
chr21	42256083	42297244	chr21:42256083-42297244	1	+	42256231	42296392	789624	16	533,188,151,118,133,51,146,124,115,185,102,169,101,159,119,1081,	0,3231,3905,14986,17219,20811,26190,28476,29796,31805,32127,33966,35008,35414,38458,40080,
#Partially deleted in new
chr21	42276343	42297244	chr21:42276343-42297244	0	+	42276343	42276343	8553170	11	602,146,124,115,185,102,169,101,159,119,1081,	0,5930,8216,9536,11545,11867,13706,14748,15154,18198,19820,
#Partially deleted in new
chr21	42276685	42286141	chr21:42276685-42286141	0	+	42276685	42276685	8553170	4	260,146,124,262,	0,5588,7874,9194,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	42285933	42295352	chr21:42285933-42295352	0	+	42285933	42285933	8553170	6	61,424,169,101,159,811,	0,1955,4116,5158,5564,8608,
#Partially deleted in new
chr21	42311666	42315651	chr21:42311666-42315651	3	-	42312255	42315416	0	3	603,147,359,	0,1818,3626,
#Partially deleted in new
chr21	42312052	42315336	chr21:42312052-42315336	0	-	42312128	42315336	789624	3	217,191,44,	0,1432,3240,
#Deleted in new
chr21	42312052	42313686	chr21:42312052-42313686	0	-	42312052	42312052	8553170	2	217,202,	0,1432,
#Partially deleted in new
chr21	42312073	42315353	chr21:42312073-42315353	1	-	42312255	42315353	789624	4	200,9,137,61,	0,1411,1421,3219,
#Partially deleted in new
chr21	42346356	42351128	chr21:42346356-42351128	3	-	42346532	42350957	789624	4	190,147,150,250,	0,1129,3524,4522,
#Partially deleted in new
chr21	42346373	42350997	chr21:42346373-42350997	0	-	42346373	42346373	8553170	4	173,147,113,119,	0,1112,3507,4505,
#Partially deleted in new
chr21	42362281	42366594	chr21:42362281-42366594	3	-	42362478	42366495	0	3	214,153,184,	0,973,4129,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr21	42371836	42396059	chr21:42371836-42396059	1	-	42372761	42395417	789624	13	943,153,143,96,170,166,44,126,124,117,111,145,118,	0,3879,4704,8280,10228,11196,12133,13572,16566,17092,18090,23487,24105,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr21	42371886	42396846	chr21:42371886-42396846	3	-	42372761	42395417	789624	13	893,153,146,96,170,166,44,126,124,117,111,145,905,	0,3829,4654,8230,10178,11146,12083,13522,16516,17042,18040,23437,24055,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr21	42371886	42396052	chr21:42371886-42396052	1	-	42372761	42395417	789624	13	893,153,146,96,170,166,44,126,124,117,111,145,111,	0,3829,4654,8230,10178,11146,12083,13522,16516,17042,18040,23437,24055,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr21	42371889	42395943	chr21:42371889-42395943	1	-	42372761	42395417	789624	12	890,153,143,96,170,166,44,126,124,117,105,620,	0,3826,4651,8227,10175,11143,12080,13519,16513,17039,18037,23434,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr21	42371889	42389118	chr21:42371889-42389118	0	-	42371889	42371889	8553170	10	890,153,146,96,170,166,44,126,124,190,	0,3826,4651,8227,10175,11143,12080,13519,16513,17039,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	42371889	42383751	chr21:42371889-42383751	0	-	42371889	42371889	8553170	5	890,153,143,96,1687,	0,3826,4651,8227,10175,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr21	42371889	42390418	chr21:42371889-42390418	0	-	42371889	42371889	8553170	11	890,153,146,96,170,166,44,126,124,117,492,	0,3826,4651,8227,10175,11143,12080,13519,16513,17039,18037,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr21	42381875	42396091	chr21:42381875-42396091	1	-	42381981	42395417	789624	9	359,166,44,126,124,117,111,145,150,	0,1157,2094,3533,6527,7053,8051,13448,14066,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	42381877	42382753	chr21:42381877-42382753	0	-	42381877	42381877	8553170	2	357,59,	0,817,
#Partially deleted in new
chr21	42403446	42413176	chr21:42403446-42413176	0	+	42403945	42413176	789624	5	30,143,54,187,153,	0,469,2861,5975,9577,
#Partially deleted in new
chr21	42403861	42447243	chr21:42403861-42447243	3	+	42403945	42447194	0	14	197,54,187,199,170,209,124,100,123,93,145,107,110,187,	0,2446,5560,9162,12580,14539,22835,28241,30970,33626,38590,39450,40672,43195,
#Partially deleted in new
chr21	42403880	42413208	chr21:42403880-42413208	0	+	42403945	42409454	789624	4	178,54,155,185,	0,2427,5573,9143,
#Partially deleted in new
chr21	42403880	42447194	chr21:42403880-42447194	0	+	42403945	42443202	789624	14	178,54,187,199,170,209,124,100,123,93,145,265,110,138,	0,2427,5541,9143,12561,14520,22816,28222,30951,33607,38571,39273,40653,43176,
#Partially deleted in new
chr21	42403901	42410588	chr21:42403901-42410588	0	+	42403901	42403901	8553170	4	157,54,187,473,	0,2406,5520,6214,
#Partially deleted in new
chr21	42403911	42413205	chr21:42403911-42413205	0	+	42403945	42404062	789624	4	273,54,187,182,	0,2396,5510,9112,
#Partially deleted in new
chr21	42403914	42447681	chr21:42403914-42447681	1	+	42403945	42447194	0	15	144,54,187,199,114,170,209,124,100,123,93,145,107,110,625,	0,2393,5507,9109,9495,12527,14486,22782,28188,30917,33573,38537,39397,40619,43142,
#Partially deleted in new
chr21	42403916	42447243	chr21:42403916-42447243	1	+	42403945	42447120	0	12	142,54,187,199,170,209,124,100,123,93,145,187,	0,2391,5505,9107,12525,14484,22780,28186,30915,33571,38535,43140,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr21	42403916	42447530	chr21:42403916-42447530	0	+	42403945	42435031	789624	14	142,54,187,199,170,209,124,100,678,55,145,107,110,474,	0,2391,5505,9107,12525,14484,22780,28186,30915,33625,38535,39395,40617,43140,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	42417496	42417593	chr21:42417496-42417593	3	-	42417496	42417496	8553170	1	97,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr21	42472485	42496354	chr21:42472485-42496354	3	-	42472817	42496186	789624	9	385,150,154,72,136,91,106,114,222,	0,3412,4805,10151,13183,13885,20272,20480,23647,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr21	42472485	42496246	chr21:42472485-42496246	0	-	42472485	42472485	8553170	8	385,150,154,72,1785,106,114,114,	0,3412,4805,10151,12191,20272,20480,23647,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr21	42472696	42496186	chr21:42472696-42496186	1	-	42472817	42496186	789624	8	174,150,154,72,136,91,106,54,	0,3201,4594,9940,12972,13674,20061,23436,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	42496007	42498203	chr21:42496007-42498203	0	+	42496007	42496007	8553170	2	222,1381,	0,815,
#Partially deleted in new
chr21	42496017	42518510	chr21:42496017-42518510	0	+	42518454	42518510	789624	3	212,122,234,	0,6278,22259,
#Deleted in new
chr21	42496538	42497443	chr21:42496538-42497443	3	+	42496538	42496538	789624	3	127,111,211,	0,284,694,
#Partially deleted in new
chr21	42499631	42581440	chr21:42499631-42581440	3	+	42518454	42580360	789624	21	112,122,234,82,133,79,136,77,167,38,81,132,91,63,86,49,74,79,98,65,1096,	0,2664,18645,26144,35066,35840,39880,42772,43804,47471,54430,59326,62446,64183,65076,66195,67353,68728,75186,80104,80713,
#Partially deleted in new
chr21	42499706	42502974	chr21:42499706-42502974	0	+	42499706	42499706	8553170	3	37,122,286,	0,2589,2982,
#Partially deleted in new
chr21	42508623	42509661	chr21:42508623-42509661	2	+	42508623	42508623	8553170	2	46,341,	0,697,
#Partially deleted in new
chr21	42508633	42509658	chr21:42508633-42509658	1	+	42508633	42508633	8553170	2	36,414,	0,611,
#Partially deleted in new
chr21	42513891	42526038	chr21:42513891-42526038	0	+	42513891	42513891	8553170	4	33,87,234,263,	0,739,4385,11884,
#Partially deleted in new
chr21	42513913	42581440	chr21:42513913-42581440	1	+	42518454	42580360	789624	20	804,234,82,133,79,136,77,167,38,81,132,91,63,86,49,74,79,98,65,1096,	0,4363,11862,20784,21558,25598,28490,29522,33189,40148,45044,48164,49901,50794,51913,53071,54446,60904,65822,66431,
#Partially deleted in new
chr21	42514523	42518510	chr21:42514523-42518510	0	+	42518454	42518510	789624	3	194,66,234,	0,346,3753,
#Deleted in new
chr21	42543516	42547717	chr21:42543516-42547717	0	+	42543516	42543516	8553170	2	86,615,	0,3586,
#Partially deleted in new
chr21	42560373	42561934	chr21:42560373-42561934	3	-	42560373	42560373	8553170	2	76,499,	0,1062,
#Deleted in new
chr21	42565826	42575947	chr21:42565826-42575947	0	+	42565826	42565826	8553170	5	49,74,79,98,181,	0,1158,2533,8991,9940,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	42599279	42615058	chr21:42599279-42615058	3	-	42599279	42599279	789624	2	1569,206,	0,15573,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	42648270	42651244	chr21:42648270-42651244	3	-	42648270	42648270	8553170	2	2173,681,	0,2293,
#Partially deleted in new
chr21	42653635	42754064	chr21:42653635-42754064	0	+	42653635	42653635	8553170	7	248,99,55,71,85,82,75,	0,45277,78434,79720,90140,97480,100354,
#Partially deleted in new
chr21	42653748	42699038	chr21:42653748-42699038	0	+	42653748	42653748	8553170	5	135,71,78,76,71,	0,32443,34168,43666,45219,
#Partially deleted in new
chr21	42653749	42775509	chr21:42653749-42775509	1	+	42653814	42775293	0	19	134,71,78,44,55,71,85,82,75,87,105,83,157,114,105,129,96,82,230,	0,32442,34167,45218,78320,79606,90026,97366,100240,105249,106578,107075,108333,111631,114438,115277,116953,118689,121530,
#Partially deleted in new
chr21	42653754	42775509	chr21:42653754-42775509	3	+	42653814	42775293	0	20	129,71,78,44,180,55,71,85,82,75,87,105,83,157,114,105,129,96,82,230,	0,32437,34162,45213,78015,78315,79601,90021,97361,100235,105244,106573,107070,108328,111626,114433,115272,116948,118684,121525,
#Partially deleted in new
chr21	42653754	42775509	chr21:42653754-42775509	0	+	42653754	42653754	8553170	20	129,71,78,76,44,55,71,85,82,75,87,105,83,157,114,105,129,96,82,230,	0,32437,34162,43660,45213,78315,79601,90021,97361,100235,105244,106573,107070,108328,111626,114433,115272,116948,118684,121525,
#Partially deleted in new
chr21	42653754	42775509	chr21:42653754-42775509	0	+	42653754	42653754	8553170	17	129,180,55,71,85,82,75,87,105,83,157,114,105,129,96,82,230,	0,78015,78315,79601,90021,97361,100235,105244,106573,107070,108328,111626,114433,115272,116948,118684,121525,
#Partially deleted in new
chr21	42653778	42775509	chr21:42653778-42775509	1	+	42653814	42775293	0	19	105,71,44,180,55,71,85,82,75,87,105,83,157,114,105,129,96,82,230,	0,32413,45189,77991,78291,79577,89997,97337,100211,105220,106549,107046,108304,111602,114409,115248,116924,118660,121501,
#Partially deleted in new
chr21	42653778	42775509	chr21:42653778-42775509	1	+	42653814	42775293	0	17	105,78,44,71,85,82,75,87,105,83,157,114,105,129,96,82,230,	0,34138,45189,79577,89997,97337,100211,105220,106549,107046,108304,111602,114409,115248,116924,118660,121501,
#Partially deleted in new
chr21	42653778	42775509	chr21:42653778-42775509	1	+	42653814	42775293	0	19	105,71,78,76,44,71,85,82,75,87,105,83,157,114,105,129,96,82,230,	0,32413,34138,43636,45189,79577,89997,97337,100211,105220,106549,107046,108304,111602,114409,115248,116924,118660,121501,
#Partially deleted in new
chr21	42653778	42775509	chr21:42653778-42775509	1	+	42653866	42775293	0	19	105,78,44,180,55,71,85,82,75,87,105,83,157,114,105,129,96,82,230,	0,34138,45189,77991,78291,79577,89997,97337,100211,105220,106549,107046,108304,111602,114409,115248,116924,118660,121501,
#Partially deleted in new
chr21	42653778	42775509	chr21:42653778-42775509	1	+	42653866	42775293	0	15	105,71,85,82,75,87,105,83,157,114,105,129,96,82,230,	0,79577,89997,97337,100211,105220,106549,107046,108304,111602,114409,115248,116924,118660,121501,
#Partially deleted in new
chr21	42653778	42775509	chr21:42653778-42775509	1	+	42653866	42775293	0	16	105,78,71,85,82,75,87,105,83,157,114,105,129,96,82,230,	0,34138,79577,89997,97337,100211,105220,106549,107046,108304,111602,114409,115248,116924,118660,121501,
#Partially deleted in new
chr21	42653778	42775509	chr21:42653778-42775509	1	+	42653866	42775293	0	18	105,44,180,55,71,85,82,75,87,105,83,157,114,105,129,96,82,230,	0,45189,77991,78291,79577,89997,97337,100211,105220,106549,107046,108304,111602,114409,115248,116924,118660,121501,
#Partially deleted in new
chr21	42653778	42775509	chr21:42653778-42775509	1	+	42653866	42775293	0	18	105,78,44,55,71,85,82,75,87,105,83,157,114,105,129,96,82,230,	0,34138,45189,78291,79577,89997,97337,100211,105220,106549,107046,108304,111602,114409,115248,116924,118660,121501,
#Partially deleted in new
chr21	42653778	42775509	chr21:42653778-42775509	1	+	42653814	42775293	0	18	105,71,44,55,71,85,82,75,87,105,83,157,114,105,129,96,82,230,	0,32413,45189,78291,79577,89997,97337,100211,105220,106549,107046,108304,111602,114409,115248,116924,118660,121501,
#Partially deleted in new
chr21	42653778	42775509	chr21:42653778-42775509	0	+	42653778	42653778	8553170	14	105,71,82,75,87,105,83,157,114,105,129,96,82,230,	0,79577,97337,100211,105220,106549,107046,108304,111602,114409,115248,116924,118660,121501,
#Partially deleted in new
chr21	42653778	42775509	chr21:42653778-42775509	0	+	42653778	42653778	8553170	18	105,44,79,55,71,85,82,75,87,105,83,157,114,105,129,96,82,230,	0,45189,70777,78291,79577,89997,97337,100211,105220,106549,107046,108304,111602,114409,115248,116924,118660,121501,
#Partially deleted in new
chr21	42653778	42775509	chr21:42653778-42775509	0	+	42653778	42653778	8553170	16	105,55,71,85,82,75,87,105,83,157,114,105,129,96,82,230,	0,78291,79577,89997,97337,100211,105220,106549,107046,108304,111602,114409,115248,116924,118660,121501,
#Partially deleted in new
chr21	42653778	42775509	chr21:42653778-42775509	0	+	42653778	42653778	8553170	17	105,71,44,71,85,82,75,87,105,83,157,114,105,129,96,82,230,	0,32413,45189,79577,89997,97337,100211,105220,106549,107046,108304,111602,114409,115248,116924,118660,121501,
#Partially deleted in new
chr21	42653778	42701189	chr21:42653778-42701189	0	+	42653778	42653778	8553170	5	105,71,78,44,496,	0,32413,34138,45189,46915,
#Partially deleted in new
chr21	42653778	42775509	chr21:42653778-42775509	0	+	42653778	42653778	8553170	15	105,44,71,82,75,87,105,83,157,114,105,129,96,82,230,	0,45189,79577,97337,100211,105220,106549,107046,108304,111602,114409,115248,116924,118660,121501,
#Partially deleted in new
chr21	42653778	42775509	chr21:42653778-42775509	0	+	42653778	42653778	8553170	18	105,78,44,180,71,85,82,75,87,105,83,157,114,105,129,96,82,230,	0,34138,45189,77991,79577,89997,97337,100211,105220,106549,107046,108304,111602,114409,115248,116924,118660,121501,
#Partially deleted in new
chr21	42653812	42775509	chr21:42653812-42775509	1	+	42653814	42775293	0	16	71,44,71,85,82,75,87,105,83,157,114,105,129,96,82,230,	0,45155,79543,89963,97303,100177,105186,106515,107012,108270,111568,114375,115214,116890,118626,121467,
#Partially deleted in new
chr21	42653812	42775509	chr21:42653812-42775509	1	+	42653866	42775293	0	17	71,44,55,71,85,82,75,87,105,83,157,114,105,129,96,82,230,	0,45155,78257,79543,89963,97303,100177,105186,106515,107012,108270,111568,114375,115214,116890,118626,121467,
#Partially deleted in new
chr21	42686196	42762139	chr21:42686196-42762139	0	+	42686196	42686196	8553170	11	66,78,44,55,71,82,75,87,105,83,57,	0,1720,12771,45873,47159,64919,67793,72802,74131,74628,75886,
#Partially deleted in new
chr21	42731757	42775509	chr21:42731757-42775509	0	+	42731757	42731757	8553170	15	192,55,71,82,75,87,105,83,157,114,105,129,96,82,230,	0,312,1598,19358,22232,27241,28570,29067,30325,33623,36430,37269,38945,40681,43522,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	42733593	42741758	chr21:42733593-42741758	3	-	42733593	42733593	8553170	2	1089,665,	0,7500,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr21	42756774	42775509	chr21:42756774-42775509	0	+	42756774	42756774	8553170	10	2311,105,83,157,114,105,129,96,82,230,	0,3553,4050,5308,8606,11413,12252,13928,15664,18505,
#Partially deleted in new
chr21	42762213	42768412	chr21:42762213-42768412	0	+	42762213	42762213	8553170	3	26,114,225,	0,3167,5974,
#Partially deleted in new
chr21	42777818	42779994	chr21:42777818-42779994	3	-	42777818	42777818	789624	3	179,221,113,	0,278,2063,
#Deleted in new
chr21	42781073	42782229	chr21:42781073-42782229	3	-	42781073	42781073	8553170	2	705,79,	0,1077,
#Partially deleted in new
chr21	42843093	42879531	chr21:42843093-42879531	3	-	42850048	42879495	789624	12	188,202,70,184,65,99,61,113,157,141,66,125,	0,6947,9161,10475,11468,12588,16568,19188,20346,30457,33608,36313,
#Partially deleted in new
chr21	42849225	42879555	chr21:42849225-42879555	1	-	42850048	42879495	789624	11	1017,70,184,65,99,61,113,157,141,66,149,	0,3029,4343,5336,6456,10436,13056,14214,24325,27476,30181,
#Partially deleted in new
chr21	42849225	42879568	chr21:42849225-42879568	0	-	42849225	42849225	789624	11	1017,70,184,65,99,61,113,157,89,66,56,	0,3029,4343,5336,6456,10436,13056,14214,24377,27476,30287,
#Partially deleted in new
chr21	42849225	42879275	chr21:42849225-42879275	0	-	42849225	42849225	8553170	11	1017,70,184,65,99,61,113,157,89,66,284,	0,3029,4343,5336,6456,10436,13056,14214,24377,27476,29766,
#Partially deleted in new
chr21	42854561	42879515	chr21:42854561-42879515	0	-	42854561	42854561	8553170	8	65,99,61,113,157,89,66,109,	0,1120,5100,7720,8878,19041,22140,24845,
#Partially deleted in new
chr21	42855683	42879546	chr21:42855683-42879546	0	-	42855683	42855683	8553170	7	97,61,113,157,89,66,26,	0,3978,6598,7756,17919,21018,23837,
#Partially deleted in new
chr21	42862281	42879510	chr21:42862281-42879510	0	-	42862281	42862281	8553170	5	113,157,141,66,424,	0,1158,11269,14420,16805,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	42879643	42909105	chr21:42879643-42909105	0	+	42879643	42879643	8553170	6	222,190,159,121,1095,242,	0,3962,7157,17283,23538,29220,
#Partially deleted in new
chr21	42893264	42909105	chr21:42893264-42909105	1	+	42893333	42909021	0	4	117,121,1095,242,	0,3662,9917,15599,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	42893267	42913304	chr21:42893267-42913304	3	+	42893333	42909021	0	3	114,121,4441,	0,3659,15596,
#Partially deleted in new
chr21	42893320	42903931	chr21:42893320-42903931	0	+	42893320	42893320	8553170	2	61,750,	0,9861,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	42916802	42925646	chr21:42916802-42925646	3	-	42916802	42916802	8553170	2	2489,301,	0,8543,
#Deleted in new
chr21	42950927	42951014	chr21:42950927-42951014	3	-	42950927	42950927	5263520	1	87,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	42964638	42965363	chr21:42964638-42965363	3	-	42964638	42964638	8553170	2	176,261,	0,464,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr21	42974509	43033582	chr21:42974509-43033582	3	+	43004381	43030101	0	11	155,107,128,172,171,100,98,129,77,173,3693,	0,29816,32981,35543,38558,42398,43623,46793,50361,54192,55380,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr21	42974509	43033931	chr21:42974509-43033931	1	+	43013067	43030101	789624	10	155,107,128,171,100,98,129,77,173,4042,	0,29816,32981,38558,42398,43623,46793,50361,54192,55380,
#Partially deleted in new
chr21	42974534	43007712	chr21:42974534-43007712	0	+	42974534	42974534	8553170	3	130,107,222,	0,29791,32956,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	42974661	43018051	chr21:42974661-43018051	0	+	42974661	42974661	8553170	6	3,107,128,172,171,1144,	0,29664,32829,35391,38406,42246,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	43003888	43007515	chr21:43003888-43007515	0	+	43003888	43003888	8553170	2	544,25,	0,3602,
#Partially deleted in new
chr21	43004321	43030331	chr21:43004321-43030331	0	+	43004381	43013074	789624	9	111,128,171,100,98,129,77,173,442,	0,3169,8746,12586,13811,16981,20549,24380,25568,
#Partially deleted in new
chr21	43018130	43030162	chr21:43018130-43030162	0	+	43018130	43018130	8553170	4	100,129,260,273,	0,3172,10484,11759,
#Partially deleted in new
chr21	43020450	43029949	chr21:43020450-43029949	0	+	43020450	43020450	8553170	5	98,129,77,173,60,	0,852,4420,8251,9439,
#Partially deleted in new
chr21	43021150	43028781	chr21:43021150-43028781	0	+	43021150	43021150	8553170	3	281,77,80,	0,3720,7551,
#Partially deleted in new
chr21	43024434	43028875	chr21:43024434-43028875	0	+	43024434	43024434	8553170	3	300,77,174,	0,436,4267,
#Partially deleted in new
chr21	43024816	43030214	chr21:43024816-43030214	0	+	43024816	43024816	8553170	3	131,173,325,	0,3885,5073,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr21	43053190	43076378	chr21:43053190-43076378	3	-	43053879	43072193	0	17	793,85,109,135,78,106,85,126,92,70,135,80,135,107,217,76,154,	0,3612,4954,5643,6035,7250,9120,9762,10709,12012,12196,12425,13052,15318,18794,20075,23034,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr21	43053190	43076362	chr21:43053190-43076362	1	-	43053879	43072193	0	18	457,122,85,109,135,78,106,85,126,92,70,135,80,135,107,217,76,138,	0,671,3612,4954,5643,6035,7250,9120,9762,10709,12012,12196,12425,13052,15318,18794,20075,23034,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr21	43053190	43075831	chr21:43053190-43075831	1	-	43053879	43072193	0	17	793,85,109,135,78,106,85,126,92,70,135,80,135,107,217,38,62,	0,3612,4954,5643,6035,7250,9120,9762,10709,12012,12196,12425,13052,15318,18794,20075,22579,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr21	43053190	43075945	chr21:43053190-43075945	1	-	43053879	43072193	0	17	793,85,109,135,78,106,85,126,92,70,135,80,135,107,217,76,176,	0,3612,4954,5643,6035,7250,9120,9762,10709,12012,12196,12425,13052,15318,18794,20075,22579,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr21	43053190	43068404	chr21:43053190-43068404	0	-	43053190	43053190	8553170	14	793,85,109,135,78,106,85,126,92,70,135,80,135,627,	0,3612,4954,5643,6035,7250,9120,9762,10709,12012,12196,12425,13052,14587,
#Partially deleted in new
chr21	43053754	43058941	chr21:43053754-43058941	0	-	43053879	43058941	789624	5	229,42,85,109,108,	0,2303,3048,4390,5079,
#Partially deleted in new
chr21	43053788	43059739	chr21:43053788-43059739	0	-	43053788	43053788	8553170	5	195,85,109,135,514,	0,3014,4356,5045,5437,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	43055071	43060520	chr21:43055071-43060520	0	-	43055071	43055071	8553170	6	1028,85,109,135,78,80,	0,1731,3073,3762,4154,5369,
#Deleted in new
chr21	43055582	43058954	chr21:43055582-43058954	0	-	43055779	43058954	789624	5	319,42,85,109,121,	0,475,1220,2562,3251,
#Deleted in new
chr21	43055597	43060546	chr21:43055597-43060546	0	-	43055751	43060546	789624	7	273,42,85,109,135,78,106,	0,460,1205,2547,3236,3628,4843,
#Partially deleted in new
chr21	43059275	43064227	chr21:43059275-43064227	0	-	43059275	43059275	8553170	5	28,106,85,126,328,	0,1165,3035,3677,4624,
#Deleted in new
chr21	43061918	43063248	chr21:43061918-43063248	0	-	43061918	43061918	8553170	2	477,296,	0,1034,
#Partially deleted in new
chr21	43065615	43076943	chr21:43065615-43076943	0	-	43065615	43072193	789624	6	80,135,107,217,76,204,	0,627,2893,6369,7650,11124,
#Partially deleted in new
chr21	43066242	43075945	chr21:43066242-43075945	0	-	43066242	43066242	8553170	6	135,183,107,217,76,176,	0,1535,2266,5742,7023,9527,
#Partially deleted in new
chr21	43068320	43075864	chr21:43068320-43075864	0	-	43068320	43068320	8553170	4	295,217,76,95,	0,3664,4945,7449,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	43068403	43073508	chr21:43068403-43073508	0	-	43068403	43068403	8553170	3	212,217,243,	0,3581,4862,
#Deleted in new
chr21	43075106	43076288	chr21:43075106-43076288	0	-	43075106	43075106	8553170	2	663,64,	0,1118,
#Partially deleted in new
chr21	43092955	43107587	chr21:43092955-43107587	3	-	43093101	43107494	0	8	294,93,134,99,50,67,88,137,	0,1515,1699,2482,2738,7497,11359,14495,
#Partially deleted in new
chr21	43092955	43107565	chr21:43092955-43107565	1	-	43093101	43107494	0	8	294,93,134,99,50,67,88,115,	0,1515,1699,2482,2738,8410,11359,14495,
#Partially deleted in new
chr21	43092955	43105252	chr21:43092955-43105252	1	-	43093101	43095723	0	7	294,93,134,99,50,67,938,	0,1515,1699,2482,2738,7497,11359,
#Partially deleted in new
chr21	43092955	43107524	chr21:43092955-43107524	0	-	43100490	43107494	0	9	294,93,134,99,50,67,67,88,74,	0,1515,1699,2482,2738,7497,8410,11359,14495,
#Partially deleted in new
chr21	43092955	43095943	chr21:43092955-43095943	0	-	43092955	43092955	8553170	3	294,93,1289,	0,1515,1699,
#Partially deleted in new
chr21	43092955	43107524	chr21:43092955-43107524	0	-	43092955	43092955	8553170	7	294,93,134,99,50,3950,74,	0,1515,1699,2482,2738,7497,14495,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	43092955	43096390	chr21:43092955-43096390	0	-	43092955	43092955	8553170	2	1608,1736,	0,1699,
#Partially deleted in new
chr21	43092956	43107578	chr21:43092956-43107578	1	-	43093101	43095723	0	9	293,93,134,99,50,67,67,88,128,	0,1514,1698,2481,2737,7496,8409,11358,14494,
#Partially deleted in new
chr21	43093189	43107570	chr21:43093189-43107570	0	-	43100608	43107494	789624	8	60,93,134,99,50,38,88,120,	0,1281,1465,2248,2504,7387,11125,14261,
#Partially deleted in new
chr21	43095701	43104476	chr21:43095701-43104476	0	-	43095701	43095701	8553170	4	42,67,67,162,	0,4751,5664,8613,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	43097621	43107524	chr21:43097621-43107524	0	-	43097621	43097621	8553170	3	3811,88,74,	0,6693,9829,
#Deleted in new
chr21	43100452	43101907	chr21:43100452-43101907	0	-	43100452	43100452	8553170	2	67,542,	0,913,
#Partially deleted in new
chr21	43115333	43115709	chr21:43115333-43115709	7	-	43115333	43115333	16724991	1	376,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	43140522	43141092	chr21:43140522-43141092	3	-	43140522	43140522	789624	2	291,131,	0,439,
#Partially deleted in new
chr21	43159065	43162277	chr21:43159065-43162277	3	-	43159065	43159065	8553170	3	702,164,186,	0,2023,3026,
#Deleted in new
chr21	43169007	43172805	chr21:43169007-43172805	3	+	43169099	43172280	789624	3	281,123,735,	0,1509,3063,
#Deleted in new
chr21	43169086	43172805	chr21:43169086-43172805	0	+	43169086	43169086	8553170	4	202,68,123,735,	0,446,1430,2984,
#Deleted in new
chr21	43169600	43172294	chr21:43169600-43172294	1	+	43169724	43172280	789624	3	253,123,224,	0,916,2470,
#Deleted in new
chr21	43170155	43172519	chr21:43170155-43172519	1	+	43170331	43172280	8553170	3	254,123,449,	0,361,1915,
#Deleted in new
chr21	43170226	43172638	chr21:43170226-43172638	0	+	43170226	43170226	8553170	2	413,568,	0,1844,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	43322416	43332039	chr21:43322416-43332039	3	-	43322416	43322416	789624	3	433,82,184,	0,3742,9439,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	43358146	43362349	chr21:43358146-43362349	3	-	43358146	43358146	789624	2	1340,1458,	0,2745,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	43363331	43366566	chr21:43363331-43366566	3	+	43363331	43363331	8553170	2	2356,460,	0,2775,
#Partially deleted in new
chr21	43414482	43427189	chr21:43414482-43427189	3	-	43416741	43426178	789624	14	2635,232,282,217,126,147,224,124,125,162,64,117,170,180,	0,3060,3777,4538,4870,5376,5751,6527,6760,7155,7491,10924,11540,12527,
#Deleted in new
chr21	43419293	43419922	chr21:43419293-43419922	0	-	43419293	43419293	8553170	2	185,64,	0,565,
#Deleted in new
chr21	43420437	43422112	chr21:43420437-43422112	0	-	43420437	43420437	8553170	5	20,124,125,162,139,	0,572,805,1200,1536,
#Deleted in new
chr21	43421111	43422005	chr21:43421111-43422005	0	-	43421111	43421111	8553170	3	22,125,368,	0,131,526,
#Partially deleted in new
chr21	43421675	43426853	chr21:43421675-43426853	0	-	43421675	43426178	789624	5	124,64,117,170,54,	0,298,3731,4347,5124,
#Deleted in new
chr21	43425305	43427092	chr21:43425305-43427092	0	-	43425305	43425305	8553170	3	218,170,83,	0,717,1704,
#Partially deleted in new
chr21	43446600	43453893	chr21:43446600-43453893	3	+	43446600	43446600	8553170	4	299,304,183,2721,	0,2166,4138,4572,
#Deleted in new
chr21	43450023	43453893	chr21:43450023-43453893	0	+	43450023	43450023	5263520	3	898,1333,773,	0,1149,3097,
#Partially deleted in new
chr21	43462093	43478223	chr21:43462093-43478223	3	-	43462093	43462093	5263520	4	168,183,68,160,	0,9418,13878,15970,
#Partially deleted in new
chr21	43462093	43464973	chr21:43462093-43464973	0	-	43462093	43462093	8553170	2	168,101,	0,2779,
#Partially deleted in new
chr21	43462111	43464816	chr21:43462111-43464816	0	-	43462111	43462111	8553170	3	150,150,225,	0,1228,2480,
#Partially deleted in new
chr21	43462111	43464917	chr21:43462111-43464917	0	-	43462111	43462111	8553170	3	150,150,45,	0,1228,2761,
#Partially deleted in new
chr21	43462111	43464917	chr21:43462111-43464917	1	-	43462111	43462111	8553170	4	150,68,150,45,	0,346,1228,2761,
#Partially deleted in new
chr21	43465308	43467298	chr21:43465308-43467298	3	+	43465308	43465308	8553170	2	39,241,	0,1749,
#Partially deleted in new
chr21	43470432	43471592	chr21:43470432-43471592	1	-	43470432	43470432	8553170	2	886,81,	0,1079,
#Partially deleted in new
chr21	43475924	43479534	chr21:43475924-43479534	1	-	43475924	43475924	8553170	4	115,212,86,35,	0,615,2139,3575,
#Partially deleted in new
chr21	43529191	43659493	chr21:43529191-43659493	3	-	43529753	43658096	789624	9	771,104,118,133,150,104,151,260,108,	0,63033,84638,101130,104080,115097,127395,128869,130194,
#Deleted in new
chr21	43551228	43551600	chr21:43551228-43551600	7	+	43551228	43551228	16724991	1	372,	0,
#Partially deleted in new
chr21	43565188	43565648	chr21:43565188-43565648	3	+	43565238	43565619	789624	1	460,	0,
#Deleted in new
chr21	43609886	43609989	chr21:43609886-43609989	3	-	43609886	43609886	5263520	1	103,	0,
#Partially deleted in new
chr21	43613850	43659470	chr21:43613850-43659470	0	-	43613850	43658096	789624	7	97,133,159,104,151,260,85,	0,16471,19412,30438,42736,44210,45535,
#Partially deleted in new
chr21	43659547	43696079	chr21:43659547-43696079	3	+	43659664	43693383	789624	16	247,83,58,86,62,130,65,182,95,98,20,132,725,153,64,2890,	0,10336,12760,14322,15088,15486,16724,17185,23731,25005,26222,27256,27968,30740,31891,33642,
#Partially deleted in new
chr21	43686131	43696077	chr21:43686131-43696077	0	+	43686131	43686131	8553170	5	804,725,153,64,2888,	0,1384,4156,5307,7058,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	43719093	43738861	chr21:43719093-43738861	1	+	43719294	43737075	789624	3	288,55,1908,	0,14975,17860,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr21	43719096	43762307	chr21:43719096-43762307	1	+	43719294	43756063	0	10	285,55,105,47,86,46,112,137,67,6357,	0,14972,22570,26982,29898,31403,33421,34486,36601,36854,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr21	43719111	43762307	chr21:43719111-43762307	3	+	43719294	43756063	0	11	270,55,105,84,47,86,46,112,137,67,6357,	0,14957,22555,24612,26967,29883,31388,33406,34471,36586,36839,
#Partially deleted in new
chr21	43719175	43752629	chr21:43719175-43752629	0	+	43719175	43719175	8553170	8	206,55,105,139,47,86,46,112,	0,14893,22491,24493,26903,29819,31324,33342,
#Partially deleted in new
chr21	43719176	43723893	chr21:43719176-43723893	0	+	43719176	43719176	8553170	2	205,397,	0,4320,
#Partially deleted in new
chr21	43719222	43744650	chr21:43719222-43744650	0	+	43719222	43719222	8553170	5	159,55,105,84,180,	0,14846,22444,24501,25248,
#Partially deleted in new
chr21	43721691	43732265	chr21:43721691-43732265	0	+	43721691	43721691	8553170	2	215,127,	0,10447,
#Partially deleted in new
chr21	43728729	43753654	chr21:43728729-43753654	0	+	43728729	43728729	8553170	9	281,55,105,84,47,86,46,112,72,	0,5339,12937,14994,17349,20265,21770,23788,24853,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	43728899	43738861	chr21:43728899-43738861	1	+	43732377	43737075	789624	4	111,509,55,1908,	0,3239,5169,8054,
#Partially deleted in new
chr21	43728912	43747186	chr21:43728912-43747186	0	+	43728912	43728912	8553170	6	98,55,105,84,47,71,	0,5156,12754,14811,17166,18203,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	43728916	43738831	chr21:43728916-43738831	0	+	43728916	43728916	8553170	4	94,304,55,1251,	0,3222,5152,8664,
#Partially deleted in new
chr21	43733670	43753594	chr21:43733670-43753594	0	+	43733670	43733670	8553170	9	36,55,105,84,47,86,46,112,12,	0,398,7996,10053,12408,15324,16829,18847,19912,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	43734061	43738858	chr21:43734061-43738858	1	+	43737147	43737636	789624	2	62,1905,	0,2892,
#Partially deleted in new
chr21	43741015	43753654	chr21:43741015-43753654	0	+	43741015	43741015	8553170	8	25,105,84,47,86,46,112,72,	0,651,2708,5063,7979,9484,11502,12567,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr21	43741419	43762307	chr21:43741419-43762307	1	+	43741550	43756063	789624	10	153,105,84,47,86,46,112,137,67,6357,	0,247,2304,4659,7575,9080,11098,12163,14278,14531,
#Partially deleted in new
chr21	43741464	43756255	chr21:43741464-43756255	0	+	43741464	43741464	8553170	10	112,105,84,47,86,46,112,137,67,305,	0,202,2259,4614,7530,9035,11053,12118,14233,14486,
#Partially deleted in new
chr21	43741475	43756144	chr21:43741475-43756144	0	+	43741475	43741475	8553170	9	296,84,47,86,46,112,137,67,194,	0,2248,4603,7519,9024,11042,12107,14222,14475,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	43745702	43756173	chr21:43745702-43756173	0	+	43745702	43745702	8553170	7	423,86,46,112,137,67,223,	0,3292,4797,6815,7880,9995,10248,
#Deleted in new
chr21	43753582	43756162	chr21:43753582-43756162	0	+	43753582	43753582	8553170	3	137,288,212,	0,1894,2368,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	43772510	43776445	chr21:43772510-43776445	3	-	43774201	43776269	0	3	1820,102,242,	0,2147,3693,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	43772510	43776238	chr21:43772510-43776238	0	-	43774201	43776238	789624	2	1820,35,	0,3693,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	43772520	43776318	chr21:43772520-43776318	1	-	43774573	43776269	789624	2	2239,115,	0,3683,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	43772524	43776268	chr21:43772524-43776268	0	-	43772524	43772524	8553170	1	3744,	0,
#Deleted in new
chr21	43783122	43783573	chr21:43783122-43783573	7	+	43783122	43783122	16724991	1	451,	0,
#Partially deleted in new
chr21	43789512	43797537	chr21:43789512-43797537	0	+	43789512	43789512	8553170	6	183,83,58,86,62,116,	0,1837,3159,3806,5676,7909,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr21	43789512	43805293	chr21:43789512-43805293	3	+	43789629	43803774	789624	13	250,83,58,86,62,130,65,194,80,98,20,114,1782,	0,1837,3159,3806,5676,7909,8118,8394,10057,11004,11349,12761,13999,
#Partially deleted in new
chr21	43789558	43797982	chr21:43789558-43797982	0	+	43789629	43791020	789624	9	204,41,83,58,86,62,130,65,76,	0,1457,1791,3113,3760,5630,7863,8072,8348,
#Partially deleted in new
chr21	43789576	43793419	chr21:43789576-43793419	0	+	43789576	43789576	8553170	3	186,83,748,	0,1773,3095,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	43790492	43791412	chr21:43790492-43791412	0	+	43790492	43790492	8553170	2	564,63,	0,857,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr21	43792930	43805293	chr21:43792930-43805293	0	+	43792930	43792930	8553170	10	474,62,130,65,194,80,98,20,114,1782,	0,2258,4491,4700,4976,6639,7586,7931,9343,10581,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr21	43797360	43805293	chr21:43797360-43805293	0	+	43797360	43797360	8553170	8	191,65,194,80,98,20,114,1782,	0,270,546,2209,3156,3501,4913,6151,
#Partially deleted in new
chr21	43805757	43812567	chr21:43805757-43812567	3	-	43805757	43805757	789624	2	831,3767,	0,3043,
#Partially deleted in new
chr21	43805757	43810331	chr21:43805757-43810331	0	-	43805757	43805757	8553170	2	831,101,	0,4473,
#Partially deleted in new
chr21	43805757	43810361	chr21:43805757-43810361	1	-	43805757	43805757	8553170	4	831,276,651,131,	0,1206,3043,4473,
#Partially deleted in new
chr21	43855889	43856342	chr21:43855889-43856342	7	-	43855889	43855889	16724991	1	453,	0,
#Partially deleted in new
chr21	43865185	43986536	chr21:43865185-43986536	3	+	43959681	43982392	789624	10	160,63,226,170,162,154,103,76,199,4233,	0,38771,94448,102760,103932,105467,106202,112860,115803,117118,
#Deleted in new
chr21	43866618	43867746	chr21:43866618-43867746	0	+	43866618	43866618	8553170	4	47,208,102,70,	0,520,874,1058,
#Partially deleted in new
chr21	43867241	43968005	chr21:43867241-43968005	0	+	43959681	43968005	789624	4	105,63,226,60,	0,36715,92392,100704,
#Partially deleted in new
chr21	43882543	43984673	chr21:43882543-43984673	1	+	43959681	43982392	789624	10	72,63,226,170,162,154,103,76,199,2370,	0,21413,77090,85402,86574,88109,88844,95502,98445,99760,
#Partially deleted in new
chr21	43903890	43984673	chr21:43903890-43984673	1	+	43959681	43982392	789624	9	129,226,170,162,154,103,76,199,2370,	0,55743,64055,65227,66762,67497,74155,77098,78413,
#Partially deleted in new
chr21	43916271	43969153	chr21:43916271-43969153	0	+	43959681	43969153	789624	4	150,226,170,36,	0,43362,51674,52846,
#Deleted in new
chr21	43919794	43919901	chr21:43919794-43919901	3	-	43919794	43919794	8553170	1	107,	0,
#Partially deleted in new
chr21	43925007	43986536	chr21:43925007-43986536	1	+	43959681	43982392	789624	9	444,226,170,162,154,103,76,199,4233,	0,34626,42938,44110,45645,46380,53038,55981,57296,
#Partially deleted in new
chr21	43946929	43984673	chr21:43946929-43984673	1	+	43959681	43982392	789624	11	129,56,693,226,170,162,154,103,76,199,2370,	0,1344,7620,12704,21016,22188,23723,24458,31116,34059,35374,
#Partially deleted in new
chr21	43946949	43971490	chr21:43946949-43971490	0	+	43959681	43971490	789624	6	109,226,170,162,154,103,	0,12684,20996,22168,23703,24438,
#Partially deleted in new
chr21	43947005	43959796	chr21:43947005-43959796	0	+	43959681	43959796	789624	3	53,176,163,	0,1148,12628,
#Partially deleted in new
chr21	43947009	43955102	chr21:43947009-43955102	0	+	43947009	43947009	8553170	3	49,189,553,	0,1144,7540,
#Partially deleted in new
chr21	43950686	43971490	chr21:43950686-43971490	0	+	43959681	43971490	789624	6	188,226,170,162,154,103,	0,8947,17259,18431,19966,20701,
#Partially deleted in new
chr21	43950712	43955160	chr21:43950712-43955160	0	+	43950712	43950712	8553170	2	162,611,	0,3837,
#Partially deleted in new
chr21	43954547	43982717	chr21:43954547-43982717	1	+	43959681	43982392	789624	9	695,226,170,162,154,103,76,199,414,	0,5086,13398,14570,16105,16840,23498,26441,27756,
#Partially deleted in new
chr21	43959782	43982724	chr21:43959782-43982724	0	+	43959782	43959782	8553170	9	77,148,170,162,154,103,76,199,421,	0,849,8163,9335,10870,11605,18263,21206,22521,
#Partially deleted in new
chr21	43959788	43969267	chr21:43959788-43969267	0	+	43959788	43959788	8553170	4	71,148,247,150,	0,843,8080,9329,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	43964928	43982377	chr21:43964928-43982377	0	+	43964928	43964928	8553170	7	3187,162,154,103,76,199,74,	0,4189,5724,6459,13117,16060,17375,
#Partially deleted in new
chr21	43971402	43981412	chr21:43971402-43981412	0	+	43971402	43971402	8553170	3	88,76,424,	0,6643,9586,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	43996321	43996420	chr21:43996321-43996420	3	-	43996321	43996321	8553170	1	99,	0,
#Partially deleted in new
chr21	44012318	44106552	chr21:44012318-44106552	3	+	44012493	44103531	789624	23	242,82,136,197,196,112,248,147,115,77,92,141,113,515,142,159,230,101,127,171,178,195,3260,	0,19772,25473,39961,43379,46784,51219,62005,62720,64233,65374,67245,67696,70469,71803,74483,75380,77514,79604,81744,86038,90459,90974,
#Partially deleted in new
chr21	44012318	44060262	chr21:44012318-44060262	1	+	44012493	44059505	789624	7	242,82,136,197,196,112,798,	0,19772,25473,39961,43379,46784,47146,
#Partially deleted in new
chr21	44012324	44104733	chr21:44012324-44104733	0	+	44012493	44063060	789624	24	236,82,136,197,196,112,116,248,147,115,77,92,141,113,515,142,159,230,101,127,171,178,195,1441,	0,19766,25467,39955,43373,46778,50728,51213,61999,62714,64227,65368,67239,67690,70463,71797,74477,75374,77508,79598,81738,86032,90453,90968,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	44046346	44047041	chr21:44046346-44047041	7	-	44046346	44046346	16724991	2	160,235,	0,460,
#Partially deleted in new
chr21	44079475	44082900	chr21:44079475-44082900	0	+	44079475	44079475	8553170	3	229,113,113,	0,539,3312,
#Partially deleted in new
chr21	44079792	44083015	chr21:44079792-44083015	0	+	44079792	44079792	8553170	2	335,228,	0,2995,
#Partially deleted in new
chr21	44088038	44106552	chr21:44088038-44106552	0	+	44088038	44088038	8553170	6	1895,127,171,178,195,3260,	0,3884,6024,10318,14739,15254,
#Partially deleted in new
chr21	44089484	44098424	chr21:44089484-44098424	0	+	44089484	44089484	8553170	5	96,101,127,171,68,	0,348,2438,4578,8872,
#Partially deleted in new
chr21	44089500	44096704	chr21:44089500-44096704	0	+	44089500	44089500	8553170	5	80,101,127,171,100,	0,332,2422,4562,7104,
#Partially deleted in new
chr21	44089700	44098434	chr21:44089700-44098434	0	+	44089700	44089700	8553170	5	53,101,127,171,78,	0,132,2222,4362,8656,
#Partially deleted in new
chr21	44089759	44098534	chr21:44089759-44098534	0	+	44089759	44089759	8553170	5	174,127,171,109,178,	0,2163,4303,6845,8597,
#Partially deleted in new
chr21	44091752	44098425	chr21:44091752-44098425	0	+	44091752	44091752	8553170	3	297,171,69,	0,2310,6604,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	44096579	44105051	chr21:44096579-44105051	0	+	44096579	44096579	8553170	3	1955,195,1759,	0,6198,6713,
#Partially deleted in new
chr21	44107289	44131181	chr21:44107289-44131181	3	+	44107416	44130771	789624	21	145,113,95,100,144,136,230,144,71,137,149,148,151,181,148,109,66,219,151,75,585,	0,1694,6463,6889,7335,7974,8401,10530,11473,12097,13058,13341,13662,14887,17290,18721,19610,20642,20957,21262,23307,
#Partially deleted in new
chr21	44107372	44115744	chr21:44107372-44115744	0	+	44107416	44115744	789624	6	62,113,95,144,136,54,	0,1611,6380,7252,7891,8318,
#Deleted in new
chr21	44114575	44117843	chr21:44114575-44117843	0	+	44114575	44114575	8553170	4	193,136,230,24,	0,688,1115,3244,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	44119158	44127855	chr21:44119158-44127855	0	+	44119158	44119158	8553170	6	365,149,148,1406,1540,956,	0,1189,1472,1793,5421,7741,
#Deleted in new
chr21	44126010	44128599	chr21:44126010-44128599	0	+	44126010	44126010	8553170	6	109,66,119,219,151,48,	0,889,1564,1921,2236,2541,
#Deleted in new
chr21	44127798	44128651	chr21:44127798-44128651	0	+	44127798	44127798	8553170	3	352,151,100,	0,448,753,
#Partially deleted in new
chr21	44133604	44145723	chr21:44133604-44145723	3	+	44133697	44144949	789624	7	234,53,114,120,93,157,903,	0,497,2455,3572,6645,9600,11216,
#Partially deleted in new
chr21	44133609	44203064	chr21:44133609-44203064	1	+	44133697	44202113	789624	5	229,53,114,120,1015,	0,492,2450,3567,68440,
#Partially deleted in new
chr21	44133609	44197892	chr21:44133609-44197892	0	+	44133697	44136092	789624	4	229,114,120,722,	0,2450,3567,63561,
#Partially deleted in new
chr21	44133615	44145012	chr21:44133615-44145012	0	+	44133615	44133615	8553170	6	539,114,120,93,157,192,	0,2444,3561,6634,9589,11205,
#Partially deleted in new
chr21	44133617	44141417	chr21:44133617-44141417	1	+	44133697	44141074	789624	6	221,53,114,120,93,476,	0,484,2442,3559,6632,7324,
#Partially deleted in new
chr21	44133638	44141417	chr21:44133638-44141417	0	+	44133638	44133638	8553170	5	200,114,120,93,254,	0,2421,3538,6611,7525,
#Partially deleted in new
chr21	44133673	44140604	chr21:44133673-44140604	0	+	44133673	44133673	8553170	5	165,53,114,120,355,	0,428,2386,3503,6576,
#Partially deleted in new
chr21	44133679	44145723	chr21:44133679-44145723	1	+	44133697	44144949	789624	6	159,53,114,120,157,903,	0,422,2380,3497,9525,11141,
#Partially deleted in new
chr21	44133778	44141417	chr21:44133778-44141417	0	+	44133778	44141398	789624	6	60,53,114,120,93,254,	0,323,2281,3398,6471,7385,
#Partially deleted in new
chr21	44136074	44210114	chr21:44136074-44210114	0	+	44136074	44208171	789624	5	99,120,93,307,1646,	0,1102,4175,71838,72394,
#Deleted in new
chr21	44136106	44137575	chr21:44136106-44137575	0	+	44136106	44136106	8553170	2	67,399,	0,1070,
#Partially deleted in new
chr21	44136118	44145723	chr21:44136118-44145723	0	+	44136118	44145624	789624	6	55,120,93,157,96,153,	0,1058,4131,7086,8702,9452,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	44136150	44194535	chr21:44136150-44194535	0	+	44136150	44193689	789624	6	23,120,93,157,96,912,	0,1026,4099,7054,8670,57473,
#Deleted in new
chr21	44136873	44137566	chr21:44136873-44137566	0	+	44136873	44136873	8553170	2	154,390,	0,303,
#Partially deleted in new
chr21	44136982	44162823	chr21:44136982-44162823	0	+	44136982	44136982	8553170	4	45,120,93,242,	0,194,3267,25599,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	44158739	44160072	chr21:44158739-44160072	3	-	44158739	44158739	8553170	2	615,248,	0,1085,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	44159014	44160076	chr21:44159014-44160076	1	-	44159014	44159014	8553170	3	147,76,252,	0,264,810,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	44172168	44194338	chr21:44172168-44194338	3	-	44172168	44172168	8553170	6	2186,335,140,162,380,348,	0,2649,5311,16289,18179,21822,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	44175488	44176453	chr21:44175488-44176453	3	+	44175488	44175488	8553170	2	47,774,	0,191,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	44200615	44202864	chr21:44200615-44202864	1	-	44200615	44200615	8553170	2	1342,299,	0,1950,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	44200912	44207399	chr21:44200912-44207399	3	-	44200912	44200912	8553170	4	103,135,262,197,	0,910,5616,6290,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	44217013	44230089	chr21:44217013-44230089	0	-	44218056	44230089	789624	2	1231,36,	0,13040,
#Partially deleted in new
chr21	44222990	44240840	chr21:44222990-44240840	1	-	44223046	44240817	789624	7	88,36,165,291,351,41,37,	0,7063,8289,12281,13876,15457,17813,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	44222990	44240945	chr21:44222990-44240945	3	-	44229033	44240817	789624	7	6054,36,165,291,351,41,142,	0,7063,8289,12281,13876,15457,17813,
#Partially deleted in new
chr21	44226833	44240966	chr21:44226833-44240966	1	-	44229033	44240817	789624	6	2211,36,165,291,41,163,	0,3220,4446,8438,11614,13970,
#Partially deleted in new
chr21	44226833	44240945	chr21:44226833-44240945	1	-	44229529	44240817	789624	6	3256,165,291,351,41,142,	0,4446,8438,10033,11614,13970,
#Deleted in new
chr21	44241846	44242081	chr21:44241846-44242081	3	+	44241846	44241846	8553170	1	235,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	44244544	44244993	chr21:44244544-44244993	3	+	44244544	44244544	8553170	1	449,	0,
#Partially deleted in new
chr21	44246338	44262216	chr21:44246338-44262216	3	-	44246396	44261259	0	12	227,86,140,76,89,88,172,113,80,45,113,477,	0,2687,4471,5284,8278,9728,12184,13098,13293,14456,14815,15401,
#Partially deleted in new
chr21	44246338	44251238	chr21:44246338-44251238	0	-	44246396	44251238	789624	4	224,86,140,153,	0,2687,4471,4747,
#Partially deleted in new
chr21	44246351	44261890	chr21:44246351-44261890	1	-	44246396	44261259	0	12	211,86,140,76,89,88,172,113,80,45,113,151,	0,2674,4458,5271,8265,9715,12171,13085,13280,14443,14802,15388,
#Partially deleted in new
chr21	44250809	44261882	chr21:44250809-44261882	0	-	44250809	44261259	789624	9	140,76,89,88,172,113,80,113,143,	0,813,3807,5257,7713,8627,8822,10344,10930,
#Deleted in new
chr21	44250812	44251520	chr21:44250812-44251520	3	+	44250812	44250812	789624	2	129,394,	0,314,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr21	44285837	44298648	chr21:44285837-44298648	0	+	44285837	44285837	8553170	12	301,175,614,1458,81,113,100,183,122,103,63,993,	0,719,1140,2507,4150,5260,6464,7155,7951,8563,10545,11818,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr21	44285845	44297739	chr21:44285845-44297739	0	+	44285845	44285845	8553170	14	293,175,614,114,189,146,81,113,100,183,122,132,63,84,	0,711,1132,2499,3382,3811,4142,5252,6456,7147,7943,8526,10537,11810,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr21	44285879	44298219	chr21:44285879-44298219	3	+	44286006	44297727	0	14	259,175,156,75,114,146,81,116,100,183,122,103,63,564,	0,677,1098,1637,2465,3777,4108,5215,6422,7113,7909,8521,10503,11776,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	44290754	44297989	chr21:44290754-44297989	0	+	44290754	44290754	8553170	7	456,100,183,122,103,63,334,	0,1547,2238,3034,3646,5628,6901,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr21	44290754	44297989	chr21:44290754-44297989	0	+	44290754	44290754	8553170	8	456,100,33,68,122,103,63,334,	0,1547,2238,2353,3034,3646,5628,6901,
#Partially deleted in new
chr21	44300050	44327376	chr21:44300050-44327376	3	+	44300105	44326862	789624	22	140,74,78,190,166,45,109,96,93,126,65,64,147,71,88,153,165,62,112,100,106,662,	0,6630,10955,12054,12927,13587,13862,16193,16381,18419,19300,20033,21678,22082,22911,23715,24440,24805,25102,25910,26108,26664,
#Partially deleted in new
chr21	44300050	44327376	chr21:44300050-44327376	0	+	44300105	44304318	789624	25	140,181,161,136,74,78,190,166,45,109,96,93,126,65,64,147,71,88,153,165,62,112,100,106,662,	0,4224,5206,5749,6630,10955,12054,12927,13587,13862,16193,16381,18419,19300,20033,21678,22082,22911,23715,24440,24805,25102,25910,26108,26664,
#Partially deleted in new
chr21	44300066	44316339	chr21:44300066-44316339	0	+	44300066	44300066	8553170	9	124,181,74,78,190,166,45,109,96,	0,4208,6614,10939,12038,12911,13571,13846,16177,
#Partially deleted in new
chr21	44300095	44327376	chr21:44300095-44327376	0	+	44300095	44300095	8553170	20	95,74,78,190,166,45,2427,93,126,797,147,71,88,153,165,62,112,329,106,662,	0,6585,10910,12009,12882,13542,13817,16336,18374,19255,21633,22037,22866,23670,24395,24760,25057,25636,26063,26619,
#Partially deleted in new
chr21	44300105	44304318	chr21:44300105-44304318	1	+	44300105	44304318	789624	2	85,44,	0,4169,
#Partially deleted in new
chr21	44305193	44313954	chr21:44305193-44313954	0	+	44305193	44305193	8553170	7	224,74,78,190,166,45,42,	0,1487,5812,6911,7784,8444,8719,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr21	44315526	44327376	chr21:44315526-44327376	0	+	44315526	44315526	8553170	11	813,93,126,2525,71,88,153,165,1205,106,662,	0,905,2943,3824,6606,7435,8239,8964,9329,10632,11188,
#Partially deleted in new
chr21	44319622	44327376	chr21:44319622-44327376	0	+	44319622	44319622	8553170	9	525,147,71,88,153,165,1205,106,662,	0,2106,2510,3339,4143,4868,5233,6536,7092,
#Partially deleted in new
chr21	44319840	44324543	chr21:44319840-44324543	0	+	44319840	44319840	8553170	6	307,147,71,88,153,124,	0,1888,2292,3121,3925,4579,
#Partially deleted in new
chr21	44319866	44327376	chr21:44319866-44327376	0	+	44319866	44319866	8553170	11	281,147,71,88,153,165,62,112,100,106,662,	0,1862,2266,3095,3899,4624,4989,5286,6094,6292,6848,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr21	44320576	44327376	chr21:44320576-44327376	0	+	44320576	44320576	8553170	10	1299,71,88,153,165,62,112,100,106,662,	0,1556,2385,3189,3914,4279,4576,5384,5582,6138,
#Deleted in new
chr21	44322961	44325635	chr21:44322961-44325635	0	+	44322961	44322961	8553170	5	88,153,165,62,483,	0,804,1529,1894,2191,
#Partially deleted in new
chr21	44328943	44339402	chr21:44328943-44339402	3	-	44330197	44339194	789624	7	1383,97,172,230,47,19,285,	0,1879,2899,4089,6814,8705,10174,
#Deleted in new
chr21	44328943	44330046	chr21:44328943-44330046	1	-	44328943	44328943	8553170	2	288,416,	0,687,
#Deleted in new
chr21	44328943	44330221	chr21:44328943-44330221	3	-	44328943	44328943	8553170	3	288,189,142,	0,687,1136,
#Partially deleted in new
chr21	44329890	44339402	chr21:44329890-44339402	1	-	44330197	44339194	789624	7	436,94,172,230,47,19,285,	0,932,1952,3142,5867,7758,9227,
#Partially deleted in new
chr21	44329890	44339393	chr21:44329890-44339393	1	-	44330197	44339194	789624	7	436,454,172,230,47,19,276,	0,572,1952,3142,5867,7758,9227,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	44329890	44338784	chr21:44329890-44338784	0	-	44329890	44329890	8553170	6	436,1552,230,1744,19,551,	0,572,3142,4170,7758,8343,
#Deleted in new
chr21	44329890	44331968	chr21:44329890-44331968	0	-	44329890	44329890	8553170	3	436,97,121,	0,932,1957,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	44331233	44335851	chr21:44331233-44335851	3	+	44331233	44331233	8553170	2	1704,2650,	0,1968,
#Deleted in new
chr21	44331961	44333464	chr21:44331961-44333464	0	-	44331961	44331961	8553170	2	53,432,	0,1071,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	44347766	44348295	chr21:44347766-44348295	3	-	44347766	44347766	8553170	1	529,	0,
#Partially deleted in new
chr21	44350162	44443081	chr21:44350162-44443081	3	+	44353700	44441817	789624	33	113,265,89,169,181,167,181,62,201,103,122,354,138,130,146,113,217,119,133,172,184,182,133,88,88,158,77,102,87,106,102,117,1390,	0,3438,4485,13951,16591,19014,25670,27549,28834,32555,40741,41109,45251,47584,49133,50096,51518,54979,55742,56431,63728,67764,68260,73482,74689,75507,76497,76847,84968,86899,88904,90626,91529,
#Partially deleted in new
chr21	44350303	44366761	chr21:44350303-44366761	0	+	44353700	44366761	789624	5	51,265,89,169,8,	0,3297,4344,13810,16450,
#Partially deleted in new
chr21	44353255	44443081	chr21:44353255-44443081	1	+	44353700	44441817	789624	32	610,89,169,181,167,181,62,201,103,122,354,138,130,146,113,217,119,133,172,184,182,133,88,88,158,77,102,87,106,102,117,1390,	0,1392,10858,13498,15921,22577,24456,25741,29462,37648,38016,42158,44491,46040,47003,48425,51886,52649,53338,60635,64671,65167,70389,71596,72414,73404,73754,81875,83806,85811,87533,88436,
#Partially deleted in new
chr21	44353687	44443081	chr21:44353687-44443081	1	+	44353700	44441817	789624	32	178,89,169,181,167,181,62,201,103,122,171,123,138,130,146,113,217,119,133,172,184,182,133,88,88,158,77,87,106,102,117,1390,	0,960,10426,13066,15489,22145,24024,25309,29030,37216,37584,37815,41726,44059,45608,46571,47993,51454,52217,52906,60203,64239,64735,69957,71164,71982,72972,81443,83374,85379,87101,88004,
#Partially deleted in new
chr21	44353687	44442358	chr21:44353687-44442358	1	+	44353700	44441817	789624	33	178,89,169,181,167,181,62,201,103,122,354,138,130,146,113,217,119,133,172,184,182,133,150,88,88,158,77,102,87,106,102,117,667,	0,960,10426,13066,15489,22145,24024,25309,29030,37216,37584,41726,44059,45608,46571,47993,51454,52217,52906,60203,64239,64735,68582,69957,71164,71982,72972,73322,81443,83374,85379,87101,88004,
#Partially deleted in new
chr21	44369120	44443081	chr21:44369120-44443081	0	+	44369120	44369120	8553170	28	223,181,62,201,103,122,354,138,130,146,113,217,119,133,172,184,182,133,88,88,158,77,102,87,106,102,117,1390,	0,6712,8591,9876,13597,21783,22151,26293,28626,30175,31138,32560,36021,36784,37473,44770,48806,49302,54524,55731,56549,57539,57889,66010,67941,69946,71668,72571,
#Partially deleted in new
chr21	44424868	44442644	chr21:44424868-44442644	1	+	44425696	44441817	789624	10	71,42,30,84,77,87,106,102,117,953,	0,801,844,875,1791,10262,12193,14198,15920,16823,
#Partially deleted in new
chr21	44425555	44441874	chr21:44425555-44441874	0	+	44425555	44425555	8553170	7	272,37,87,106,102,117,183,	0,1144,9575,11506,13511,15233,16136,
#Deleted in new
chr21	44437120	44437175	chr21:44437120-44437175	3	+	44437120	44437120	8553170	1	55,	0,
#Deleted in new
chr21	44439034	44439110	chr21:44439034-44439110	3	+	44439034	44439034	8553170	1	76,	0,
#Partially deleted in new
chr21	44450985	44455284	chr21:44450985-44455284	3	-	44450985	44450985	789624	4	304,363,76,41,	0,421,3991,4258,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	44455485	44462196	chr21:44455485-44462196	3	+	44456644	44457418	789624	2	170,5699,	0,1012,
#Partially deleted in new
chr21	44469928	44472516	chr21:44469928-44472516	7	-	44469928	44469928	16724991	3	436,258,419,	0,741,2169,
#Partially deleted in new
chr21	44472894	44473739	chr21:44472894-44473739	7	+	44472894	44472894	16724991	2	353,129,	0,716,
#Deleted in new
chr21	44473722	44475097	chr21:44473722-44475097	7	-	44473722	44473722	16724991	1	1375,	0,
#Deleted in new
chr21	44477849	44478493	chr21:44477849-44478493	3	+	44477849	44477849	8553170	1	644,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	44485576	44490288	chr21:44485576-44490288	3	+	44485576	44485576	8553170	2	654,258,	0,4454,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	44494873	44495519	chr21:44494873-44495519	3	+	44494873	44494873	8553170	1	646,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr21	44497891	44711580	chr21:44497891-44711580	3	-	44499782	44711514	789624	12	2045,102,188,230,187,227,132,157,91,239,221,148,	0,6888,11307,23991,27761,29400,30560,31906,33151,35793,69893,213541,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr21	44497891	44711572	chr21:44497891-44711572	1	-	44499782	44711514	789624	12	2045,102,188,230,187,227,132,157,91,239,221,140,	0,6888,11307,23991,27761,29400,30560,31906,33151,35793,69893,213541,
#Partially deleted in new
chr21	44499097	44711547	chr21:44499097-44711547	0	-	44690571	44711514	789624	13	839,102,188,230,187,227,132,157,91,239,221,62,115,	0,5682,10101,22785,26555,28194,29354,30700,31945,34587,68687,191447,212335,
#Deleted in new
chr21	44506806	44516575	chr21:44506806-44516575	3	+	44506806	44506806	789624	6	293,273,203,155,105,1079,	0,1230,1920,2445,3016,8690,
#Partially deleted in new
chr21	44508506	44573816	chr21:44508506-44573816	0	-	44508506	44508506	8553170	11	405,188,230,187,227,132,157,91,239,221,37,	0,692,13376,17146,18785,19945,21291,22536,25178,59278,65273,
#Deleted in new
chr21	44510685	44515623	chr21:44510685-44515623	0	+	44510685	44510685	8553170	3	114,133,127,	0,253,4811,
#Deleted in new
chr21	44517215	44518756	chr21:44517215-44518756	1	+	44517215	44517215	789624	3	620,74,129,	0,1043,1412,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	44517616	44520830	chr21:44517616-44520830	3	+	44517616	44517616	8553170	2	219,2203,	0,1011,
#Partially deleted in new
chr21	44517619	44525952	chr21:44517619-44525952	0	+	44517619	44517619	8553170	2	216,129,	0,8204,
#Deleted in new
chr21	44538980	44540195	chr21:44538980-44540195	3	-	44539301	44540150	789624	1	1215,	0,
#Deleted in new
chr21	44550356	44551505	chr21:44550356-44551505	3	-	44550690	44551458	789624	1	1149,	0,
#Deleted in new
chr21	44550434	44551505	chr21:44550434-44551505	0	-	44550434	44550434	789624	2	240,126,	0,945,
#Deleted in new
chr21	44557789	44558760	chr21:44557789-44558760	3	-	44558049	44558715	789624	1	971,	0,
#Partially deleted in new
chr21	44573723	44638284	chr21:44573723-44638284	1	+	44573743	44638173	789624	5	735,5,74,45,385,	0,27357,53889,63945,64176,
#Deleted in new
chr21	44573728	44575371	chr21:44573728-44575371	3	+	44573758	44574964	789624	1	1643,	0,
#Deleted in new
chr21	44573746	44574964	chr21:44573746-44574964	1	+	44573746	44574964	789624	4	30,225,84,258,	0,75,783,960,
#Deleted in new
chr21	44579454	44580604	chr21:44579454-44580604	3	-	44579762	44580578	789624	1	1150,	0,
#Deleted in new
chr21	44591267	44592505	chr21:44591267-44592505	3	-	44591386	44592484	789624	1	1238,	0,
#Deleted in new
chr21	44600596	44602174	chr21:44600596-44602174	3	+	44600621	44601734	789624	1	1578,	0,
#Deleted in new
chr21	44612078	44612954	chr21:44612078-44612954	3	+	44612100	44612880	789624	1	876,	0,
#Partially deleted in new
chr21	44627122	44628293	chr21:44627122-44628293	3	+	44627171	44628050	789624	1	1171,	0,
#Partially deleted in new
chr21	44627122	44628293	chr21:44627122-44628293	0	+	44627122	44627122	8553170	2	226,227,	0,944,
#Partially deleted in new
chr21	44627147	44628062	chr21:44627147-44628062	1	+	44627171	44628050	789624	3	365,151,99,	0,584,816,
#Deleted in new
chr21	44637355	44638455	chr21:44637355-44638455	3	+	44637417	44638173	789624	1	1100,	0,
#Deleted in new
chr21	44646413	44647650	chr21:44646413-44647650	3	+	44646458	44647355	789624	1	1237,	0,
#Deleted in new
chr21	44654212	44654659	chr21:44654212-44654659	3	-	44654275	44654614	789624	1	447,	0,
#Deleted in new
chr21	44657931	44658341	chr21:44657931-44658341	3	+	44657979	44658270	789624	1	410,	0,
#Deleted in new
chr21	44666188	44666927	chr21:44666188-44666927	3	-	44666445	44666886	789624	1	739,	0,
#Partially deleted in new
chr21	44675867	44678086	chr21:44675867-44678086	7	-	44675867	44675867	16724991	1	2219,	0,
#Partially deleted in new
chr21	44681575	44682163	chr21:44681575-44682163	3	-	44681832	44682123	789624	1	588,	0,
#Partially deleted in new
chr21	44686357	44686629	chr21:44686357-44686629	7	+	44686357	44686357	16724991	1	272,	0,
#Partially deleted in new
chr21	44697171	44698044	chr21:44697171-44698044	3	+	44697201	44697939	789624	1	873,	0,
#Partially deleted in new
chr21	44697426	44697807	chr21:44697426-44697807	1	+	44697426	44697807	789624	3	126,90,66,	0,177,315,
#Deleted in new
chr21	44702220	44702791	chr21:44702220-44702791	7	+	44702220	44702220	16724991	1	571,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	44768579	44802019	chr21:44768579-44802019	3	-	44771376	44801748	0	6	2910,141,119,46,36,314,	0,4967,8719,19340,19480,33126,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	44769039	44775436	chr21:44769039-44775436	0	-	44769039	44769039	8553170	2	2450,1890,	0,4507,
#Partially deleted in new
chr21	44770930	44801819	chr21:44770930-44801819	0	-	44770930	44770930	8553170	4	559,141,119,114,	0,2616,6368,30775,
#Partially deleted in new
chr21	44770971	44801779	chr21:44770971-44801779	0	-	44770971	44770971	8553170	7	518,141,100,119,46,36,74,	0,2575,3749,6327,16948,17088,30734,
#Partially deleted in new
chr21	44771278	44801823	chr21:44771278-44801823	0	-	44779194	44801748	789624	7	211,141,119,73,46,36,118,	0,2268,6020,7865,16641,16781,30427,
#Partially deleted in new
chr21	44771294	44801774	chr21:44771294-44801774	1	-	44771376	44787960	0	7	195,141,119,46,36,115,69,	0,2252,6004,16625,16765,29989,30411,
#Partially deleted in new
chr21	44773547	44801826	chr21:44773547-44801826	0	-	44774685	44801748	789624	6	140,175,119,46,36,121,	0,1019,3751,14372,14512,28158,
#Partially deleted in new
chr21	44774530	44801804	chr21:44774530-44801804	0	-	44774530	44774530	8553170	5	290,119,46,36,99,	0,2768,13389,13529,27175,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	44776833	44801801	chr21:44776833-44801801	0	-	44776833	44776833	8553170	4	584,46,36,96,	0,11086,11226,24872,
#Partially deleted in new
chr21	44777253	44801768	chr21:44777253-44801768	0	-	44777253	44777253	8553170	5	164,46,36,115,63,	0,10666,10806,24030,24452,
#Partially deleted in new
chr21	44777376	44801744	chr21:44777376-44801744	0	-	44777376	44777376	8553170	5	41,126,46,36,39,	0,8289,10543,10683,24329,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	44799989	44801808	chr21:44799989-44801808	0	-	44799989	44799989	8553170	2	1409,103,	0,1716,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	44802576	44804717	chr21:44802576-44804717	3	+	44802576	44802576	8553170	2	60,971,	0,1170,
#Partially deleted in new
chr21	44805616	44818129	chr21:44805616-44818129	3	-	44806950	44817968	0	4	1424,72,129,182,	0,3430,8359,12331,
#Partially deleted in new
chr21	44805616	44818051	chr21:44805616-44818051	1	-	44806904	44817968	789624	4	1424,122,129,104,	0,3380,8359,12331,
#Partially deleted in new
chr21	44805616	44818129	chr21:44805616-44818129	1	-	44806950	44817968	0	4	1424,72,243,182,	0,3430,8245,12331,
#Partially deleted in new
chr21	44805616	44818779	chr21:44805616-44818779	0	-	44805616	44805616	8553170	4	1424,72,129,111,	0,3430,8359,13052,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	44808270	44817968	chr21:44808270-44817968	1	-	44808346	44817968	789624	4	298,72,129,21,	0,776,5705,9677,
#Partially deleted in new
chr21	44813509	44818105	chr21:44813509-44818105	0	-	44813509	44813509	8553170	2	595,158,	0,4438,
#Partially deleted in new
chr21	44849584	44873837	chr21:44849584-44873837	3	-	44851580	44873616	789624	6	2043,47,172,109,53,336,	0,5625,6608,11578,15810,23917,
#Partially deleted in new
chr21	44849584	44873709	chr21:44849584-44873709	1	-	44851580	44873616	789624	4	2043,109,53,208,	0,11578,15810,23917,
#Partially deleted in new
chr21	44849585	44873903	chr21:44849585-44873903	1	-	44851366	44873616	789624	3	2042,53,402,	0,15809,23916,
#Partially deleted in new
chr21	44851406	44861933	chr21:44851406-44861933	1	-	44851580	44861832	789624	5	221,47,172,109,206,	0,3803,4786,9756,10321,
#Partially deleted in new
chr21	44855227	44865896	chr21:44855227-44865896	0	-	44855227	44855227	8553170	4	29,172,53,326,	0,965,10167,10343,
#Partially deleted in new
chr21	44855237	44873032	chr21:44855237-44873032	0	-	44855237	44855237	8553170	6	19,172,109,53,80,179,	0,955,5925,10157,10333,17616,
#Partially deleted in new
chr21	44861173	44873668	chr21:44861173-44873668	0	-	44861173	44861173	8553170	4	98,53,80,167,	0,4221,4397,12328,
#Partially deleted in new
chr21	44885952	44928838	chr21:44885952-44928838	1	-	44886367	44910782	789624	16	478,167,203,220,245,188,141,90,96,156,242,171,181,89,61,185,	0,783,2740,3323,4025,5856,7451,9018,13114,14367,15539,17412,20962,24331,24772,42701,
#Partially deleted in new
chr21	44885952	44928873	chr21:44885952-44928873	3	-	44886367	44910782	789624	17	478,167,203,220,245,188,141,90,96,156,242,171,181,89,61,230,220,	0,783,2740,3323,4025,5856,7451,9018,13114,14367,15539,17412,20962,24331,24772,34868,42701,
#Partially deleted in new
chr21	44885952	44910826	chr21:44885952-44910826	1	-	44886367	44910782	789624	15	478,167,203,220,245,188,141,90,96,156,242,171,181,89,102,	0,783,2740,3323,4025,5856,7451,9018,13114,14367,15539,17412,20962,24331,24772,
#Partially deleted in new
chr21	44885952	44920855	chr21:44885952-44920855	1	-	44886367	44910782	789624	15	478,167,203,220,245,188,141,90,96,156,242,181,89,61,35,	0,783,2740,3323,4025,5856,7451,9018,13114,14367,15539,20962,24331,24772,34868,
#Partially deleted in new
chr21	44885952	44911460	chr21:44885952-44911460	1	-	44886367	44910782	789624	16	478,167,203,220,245,188,141,90,96,156,242,171,181,89,61,85,	0,783,2740,3323,4025,5856,7451,9018,13114,14367,15539,17412,20962,24331,24772,25423,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	44885952	44894027	chr21:44885952-44894027	0	-	44885952	44885952	8553170	7	478,167,203,220,245,188,624,	0,783,2740,3323,4025,5856,7451,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr21	44885952	44920960	chr21:44885952-44920960	0	-	44885952	44885952	8553170	15	478,167,203,220,245,188,2144,96,156,242,171,181,89,61,140,	0,783,2740,3323,4025,5856,6964,13114,14367,15539,17412,20962,24331,24772,34868,
#Partially deleted in new
chr21	44885955	44921050	chr21:44885955-44921050	1	-	44886367	44910782	789624	16	475,167,203,220,245,188,141,90,96,156,242,171,181,89,61,230,	0,780,2737,3320,4022,5853,7448,9015,13111,14364,15536,17409,20959,24328,24769,34865,
#Partially deleted in new
chr21	44885955	44920875	chr21:44885955-44920875	0	-	44907069	44910782	789624	16	475,167,203,220,245,188,141,90,96,156,242,171,181,132,61,55,	0,780,2737,3320,4022,5853,7448,9015,13111,14364,15536,17409,20959,24328,24769,34865,
#Deleted in new
chr21	44886332	44889131	chr21:44886332-44889131	0	-	44886332	44886332	8553170	3	98,167,439,	0,403,2360,
#Partially deleted in new
chr21	44899066	44910630	chr21:44899066-44910630	0	-	44899066	44910630	789624	7	96,156,242,171,181,89,31,	0,1253,2425,4298,7848,11217,11533,
#Partially deleted in new
chr21	44901550	44920932	chr21:44901550-44920932	0	-	44901550	44901550	8553170	3	280,171,112,	0,1814,19270,
#Partially deleted in new
chr21	44903364	44911177	chr21:44903364-44911177	0	-	44903364	44910782	789624	5	171,181,89,61,178,	0,3550,6919,7360,7635,
#Partially deleted in new
chr21	44903383	44914283	chr21:44903383-44914283	0	-	44903383	44910782	789624	5	152,181,89,61,90,	0,3531,6900,7341,10810,
#Partially deleted in new
chr21	44903502	44928718	chr21:44903502-44928718	0	-	44903502	44910782	789624	6	33,181,89,61,142,65,	0,3412,6781,7222,17318,25151,
#Partially deleted in new
chr21	44903507	44920942	chr21:44903507-44920942	0	-	44903507	44907035	789624	5	28,181,89,186,122,	0,3407,6776,7092,17313,
#Partially deleted in new
chr21	44903514	44920927	chr21:44903514-44920927	0	-	44907069	44910782	789624	6	21,181,109,89,61,107,	0,3400,4559,6769,7210,17306,
#Partially deleted in new
chr21	44906924	44920899	chr21:44906924-44920899	0	-	44906924	44907035	789624	4	171,132,186,79,	0,3359,3675,13896,
#Partially deleted in new
chr21	44907031	44921133	chr21:44907031-44921133	0	-	44907031	44910782	789624	4	64,89,61,313,	0,3252,3693,13789,
#Partially deleted in new
chr21	44907986	44920896	chr21:44907986-44920896	1	-	44908002	44910782	789624	4	196,89,61,76,	0,2297,2738,12834,
#Partially deleted in new
chr21	44907986	44910741	chr21:44907986-44910741	0	-	44907986	44907986	8553170	3	196,89,142,	0,2297,2613,
#Deleted in new
chr21	44909319	44910688	chr21:44909319-44910688	0	-	44909319	44909319	8553170	2	172,405,	0,964,
#Partially deleted in new
chr21	44910283	44931989	chr21:44910283-44931989	0	-	44910283	44910782	789624	4	89,61,230,176,	0,441,10537,21530,
#Partially deleted in new
chr21	44910320	44920927	chr21:44910320-44920927	0	-	44910320	44910320	8553170	2	465,107,	0,10500,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	44921050	44929678	chr21:44921050-44929678	1	+	44921050	44921050	789624	4	277,137,43,1825,	0,5817,6574,6803,
#Partially deleted in new
chr21	44921072	44927970	chr21:44921072-44927970	1	+	44921072	44921072	8553170	3	279,112,91,	0,5734,6807,
#Partially deleted in new
chr21	44921072	44927902	chr21:44921072-44927902	3	+	44921072	44921072	789624	5	255,71,137,43,49,	0,1840,5795,6552,6781,
#Partially deleted in new
chr21	44921075	44927944	chr21:44921075-44927944	0	+	44921075	44921075	789624	4	252,71,137,91,	0,1837,5792,6778,
#Partially deleted in new
chr21	44921075	44927942	chr21:44921075-44927942	0	+	44921075	44921075	8553170	3	252,137,89,	0,5792,6778,
#Partially deleted in new
chr21	44921325	44928028	chr21:44921325-44928028	0	+	44921325	44921325	8553170	3	26,137,175,	0,5542,6528,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	44929652	44930112	chr21:44929652-44930112	3	-	44929652	44929652	8553170	1	460,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	44932813	44939913	chr21:44932813-44939913	3	-	44932813	44932813	789624	4	1555,163,264,321,	0,2120,2813,6779,
#Deleted in new
chr21	44932813	44934973	chr21:44932813-44934973	0	-	44932813	44932813	8553170	2	1555,40,	0,2120,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	44934724	44939845	chr21:44934724-44939845	0	-	44934724	44934724	789624	4	372,264,144,253,	0,902,2814,4868,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	44936302	44936954	chr21:44936302-44936954	3	+	44936302	44936302	8553170	1	652,	0,
#Partially deleted in new
chr21	44940009	44976989	chr21:44940009-44976989	1	+	44940057	44976803	789624	6	177,154,69,148,69,310,	0,3674,20090,27024,33187,36670,
#Partially deleted in new
chr21	44940011	44976989	chr21:44940011-44976989	3	+	44940057	44976803	789624	6	175,109,69,148,69,310,	0,3672,20088,27022,33185,36668,
#Partially deleted in new
chr21	44940024	44969264	chr21:44940024-44969264	0	+	44940057	44969264	789624	5	162,109,69,148,155,	0,3659,20075,27009,29085,
#Partially deleted in new
chr21	44958245	44976973	chr21:44958245-44976973	0	+	44958245	44958245	8553170	5	179,69,148,69,294,	0,1854,8788,14951,18434,
#Partially deleted in new
chr21	44973055	44976973	chr21:44973055-44976973	0	+	44973055	44973055	8553170	2	210,294,	0,3624,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	44978831	44979274	chr21:44978831-44979274	3	+	44978831	44978831	8553170	1	443,	0,
#Deleted in new
chr21	44989863	44994086	chr21:44989863-44994086	3	-	44989863	44989863	789624	2	1972,183,	0,4040,
#Deleted in new
chr21	44989863	44994069	chr21:44989863-44994069	0	-	44989863	44989863	8553170	2	1969,166,	0,4040,
#Deleted in new
chr21	44994361	44995185	chr21:44994361-44995185	3	-	44994361	44994361	8553170	1	824,	0,
#Deleted in new
chr21	44999207	45004727	chr21:44999207-45004727	3	-	44999207	44999207	789624	2	449,284,	0,5236,
#Deleted in new
chr21	45070951	45073211	chr21:45070951-45073211	5	-	45070951	45070951	16724991	1	2260,	0,
#Deleted in new
chr21	45071732	45074165	chr21:45071732-45074165	7	-	45071732	45071732	16724991	2	591,376,	0,2057,
#Deleted in new
chr21	45071827	45072239	chr21:45071827-45072239	5	-	45071827	45071827	16724991	1	412,	0,
#Partially deleted in new
chr21	45073852	45137326	chr21:45073852-45137326	0	+	45073852	45073852	8553170	4	51,172,118,246,	0,54549,60862,63228,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr21	45074568	45146295	chr21:45074568-45146295	0	+	45074568	45074568	8553170	10	225,106,56,166,172,92,124,118,332,1132,	0,42364,43995,46225,53833,57646,58990,60146,70062,70595,
#Partially deleted in new
chr21	45074599	45226560	chr21:45074599-45226560	3	+	45171656	45222197	0	11	194,172,75,935,115,169,149,169,182,179,4543,	0,53802,97010,101130,105730,107985,108762,110323,129955,146236,147418,
#Partially deleted in new
chr21	45074599	45226560	chr21:45074599-45226560	0	+	45074599	45074599	789624	13	194,172,118,75,935,115,169,149,169,182,179,1560,1014,	0,53802,60115,97010,101130,105730,107985,108762,110323,129955,146236,147418,150947,
#Partially deleted in new
chr21	45074599	45226560	chr21:45074599-45226560	0	+	45171656	45222197	0	12	194,172,75,935,115,169,149,169,182,179,1560,1014,	0,53802,97010,101130,105730,107985,108762,110323,129955,146236,147418,150947,
#Deleted in new
chr21	45100486	45101094	chr21:45100486-45101094	3	-	45100486	45100486	8553170	1	608,	0,
#Partially deleted in new
chr21	45120899	45176126	chr21:45120899-45176126	0	+	45171656	45176126	789624	4	60,172,75,397,	0,7502,50710,54830,
#Partially deleted in new
chr21	45128452	45171759	chr21:45128452-45171759	0	+	45128452	45128452	8553170	3	121,118,150,	0,6262,43157,
#Partially deleted in new
chr21	45134725	45144682	chr21:45134725-45144682	1	+	45134725	45144682	789624	2	107,52,	0,9905,
#Partially deleted in new
chr21	45134795	45226559	chr21:45134795-45226559	1	+	45134795	45222197	0	11	37,75,935,115,169,149,169,182,179,1560,1013,	0,36814,40934,45534,47789,48566,50127,69759,86040,87222,90751,
#Deleted in new
chr21	45176409	45177547	chr21:45176409-45177547	0	+	45176409	45176409	8553170	2	255,481,	0,657,
#Partially deleted in new
chr21	45180435	45183447	chr21:45180435-45183447	0	+	45180435	45180435	8553170	4	9,37,169,86,	0,1044,2149,2926,
#Partially deleted in new
chr21	45234339	45257267	chr21:45234339-45257267	0	+	45234339	45234339	8553170	3	137,95,357,	0,9192,22571,
#Partially deleted in new
chr21	45234339	45264548	chr21:45234339-45264548	3	+	45234339	45234339	8553170	4	137,95,835,310,	0,9192,24111,29899,
#Partially deleted in new
chr21	45234351	45258730	chr21:45234351-45258730	0	+	45234351	45234351	789624	3	155,95,280,	0,9180,24099,
#Partially deleted in new
chr21	45263927	45287898	chr21:45263927-45287898	1	-	45267450	45287871	0	8	3786,181,126,67,111,145,251,158,	0,5911,13089,14175,18421,19455,21750,23813,
#Partially deleted in new
chr21	45263927	45287898	chr21:45263927-45287898	0	-	45266220	45287871	0	10	1708,206,124,181,126,67,111,145,251,158,	0,2094,3662,5911,13089,14175,18421,19455,21750,23813,
#Partially deleted in new
chr21	45263927	45287898	chr21:45263927-45287898	3	-	45265481	45287871	0	9	1708,124,181,126,67,111,145,251,158,	0,3662,5911,13089,14175,18421,19455,21750,23813,
#Partially deleted in new
chr21	45263927	45283494	chr21:45263927-45283494	0	-	45263927	45263927	8553170	9	1708,206,124,181,126,541,67,111,112,	0,2094,3662,5911,13089,13305,14175,18421,19455,
#Partially deleted in new
chr21	45263928	45287896	chr21:45263928-45287896	1	-	45282438	45287871	789624	10	1707,124,181,126,67,111,176,60,251,156,	0,3661,5910,13088,14174,18420,19423,21340,21749,23812,
#Partially deleted in new
chr21	45263978	45277410	chr21:45263978-45277410	1	-	45266220	45277130	789624	6	1657,206,124,181,126,178,	0,2043,3611,5860,13038,13254,
#Deleted in new
chr21	45265373	45266375	chr21:45265373-45266375	0	-	45265373	45265373	8553170	2	262,354,	0,648,
#Partially deleted in new
chr21	45265399	45270094	chr21:45265399-45270094	0	-	45265399	45265399	8553170	3	236,124,256,	0,2190,4439,
#Partially deleted in new
chr21	45267525	45270091	chr21:45267525-45270091	0	-	45267525	45267525	8553170	2	188,253,	0,2313,
#Partially deleted in new
chr21	45267697	45285691	chr21:45267697-45285691	0	-	45267697	45285691	789624	8	16,181,126,67,111,135,145,14,	0,2141,9319,10405,14651,15106,15685,17980,
#Partially deleted in new
chr21	45269840	45287896	chr21:45269840-45287896	0	-	45269840	45269840	8553170	6	179,126,67,111,251,156,	0,7176,8262,12508,15837,17900,
#Partially deleted in new
chr21	45269850	45287884	chr21:45269850-45287884	0	-	45269850	45269850	8553170	5	169,126,67,251,144,	0,7166,8252,15827,17890,
#Partially deleted in new
chr21	45282368	45287891	chr21:45282368-45287891	0	-	45282368	45282368	8553170	4	30,145,251,151,	0,1014,3309,5372,
#Partially deleted in new
chr21	45285482	45287892	chr21:45285482-45287892	0	-	45285482	45285482	8553170	2	446,152,	0,2258,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	45288049	45297806	chr21:45288049-45297806	3	+	45288049	45288049	5263520	3	116,88,7336,	0,1301,2421,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	45288061	45297354	chr21:45288061-45297354	0	+	45288061	45288061	8553170	4	104,88,3052,1153,	0,1289,2409,8140,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	45294777	45297351	chr21:45294777-45297351	0	+	45294777	45294777	8553170	2	130,1327,	0,1247,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	45300244	45305257	chr21:45300244-45305257	3	-	45300244	45300244	8553170	3	295,1258,770,	0,2013,4243,
#Partially deleted in new
chr21	45336706	45338665	chr21:45336706-45338665	3	+	45336706	45336706	8553170	2	109,270,	0,1689,
#Partially deleted in new
chr21	45338589	45341990	chr21:45338589-45341990	3	-	45338589	45338589	789624	2	289,166,	0,3235,
#Deleted in new
chr21	45376190	45376382	chr21:45376190-45376382	7	-	45376190	45376190	16724991	1	192,	0,
#Deleted in new
chr21	45378200	45379624	chr21:45378200-45379624	3	-	45378200	45378200	8553170	2	227,92,	0,1332,
#Deleted in new
chr21	45378335	45379635	chr21:45378335-45379635	0	-	45378335	45378335	8553170	2	85,103,	0,1197,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	45403808	45404369	chr21:45403808-45404369	3	-	45403808	45403808	8553170	1	561,	0,
#Partially deleted in new
chr21	45405136	45513720	chr21:45405136-45513720	1	+	45405230	45512398	0	42	105,95,545,87,60,130,77,216,27,63,87,54,159,63,27,132,63,27,36,72,36,90,30,27,63,75,27,54,75,69,43,63,44,141,145,74,129,33,246,198,116,1533,	0,242,63105,68758,70339,71214,72274,72613,73190,74765,74933,75330,75563,76826,77658,81724,82310,83281,84349,85138,85699,86088,87398,87550,88026,88364,89408,89725,90221,91363,91913,92462,98874,99279,99997,100221,100701,102424,104219,104927,105974,107051,
#Deleted in new
chr21	45407385	45410065	chr21:45407385-45410065	3	-	45407385	45407385	789624	4	235,92,107,118,	0,622,1071,2562,
#Partially deleted in new
chr21	45419715	45425040	chr21:45419715-45425040	3	-	45419715	45419715	789624	3	1904,250,1271,	0,2696,4054,
#Partially deleted in new
chr21	45419715	45425070	chr21:45419715-45425070	0	-	45419715	45419715	789624	3	1904,250,187,	0,2696,5168,
#Partially deleted in new
chr21	45455488	45513720	chr21:45455488-45513720	3	+	45455530	45512398	0	41	688,545,87,60,130,77,216,27,63,87,54,159,63,27,132,63,27,36,72,36,90,30,27,63,75,27,54,75,69,43,63,44,141,145,74,129,33,246,198,116,1533,	0,12753,18406,19987,20862,21922,22261,22838,24413,24581,24978,25211,26474,27306,31372,31958,32929,33997,34786,35347,35736,37046,37198,37674,38012,39056,39373,39869,41011,41561,42110,48522,48927,49645,49869,50349,52072,53867,54575,55622,56699,
#Partially deleted in new
chr21	45455530	45513719	chr21:45455530-45513719	1	+	45455530	45512398	0	41	1351,545,87,60,130,77,216,27,63,87,54,159,63,27,132,63,27,36,72,36,90,30,27,63,75,27,54,75,69,43,63,44,141,145,74,129,33,246,198,116,1532,	0,12711,18364,19945,20820,21880,22219,22796,24371,24539,24936,25169,26432,27264,31330,31916,32887,33955,34744,35305,35694,37004,37156,37632,37970,39014,39331,39827,40969,41519,42068,48480,48885,49603,49827,50307,52030,53825,54533,55580,56657,
#Deleted in new
chr21	45478265	45478326	chr21:45478265-45478326	3	+	45478265	45478265	5263520	1	61,	0,
#Partially deleted in new
chr21	45490274	45513720	chr21:45490274-45513720	0	+	45490274	45512398	789624	23	72,36,90,30,27,63,75,27,54,75,69,43,63,44,141,145,74,132,33,246,198,116,1533,	0,561,950,2260,2412,2888,3226,4270,4587,5083,6225,6775,7324,13736,14141,14859,15083,15560,17286,19081,19789,20836,21913,
#Deleted in new
chr21	45493194	45497812	chr21:45493194-45497812	0	+	45493194	45493194	8553170	8	31,75,27,54,75,69,43,214,	0,306,1350,1667,2163,3305,3855,4404,
#Partially deleted in new
chr21	45493571	45531541	chr21:45493571-45531541	0	-	45496334	45531541	789624	5	2808,267,142,202,153,	0,4774,32245,37198,37817,
#Partially deleted in new
chr21	45498200	45544411	chr21:45498200-45544411	3	-	45498267	45537959	789624	6	412,142,202,760,238,275,	0,27616,32569,33188,39570,45936,
#Partially deleted in new
chr21	45502512	45504121	chr21:45502512-45504121	0	-	45502512	45502512	8553170	2	457,189,	0,1420,
#Deleted in new
chr21	45505357	45512263	chr21:45505357-45512263	0	+	45505357	45512263	789624	6	74,129,246,198,116,76,	0,480,3998,4706,5753,6830,
#Deleted in new
chr21	45506018	45512567	chr21:45506018-45512567	0	+	45506018	45506018	8553170	5	1575,246,198,116,380,	0,3337,4045,5092,6169,
#Deleted in new
chr21	45512361	45515133	chr21:45512361-45515133	0	-	45512361	45512361	8553170	2	1197,238,	0,2534,
#Deleted in new
chr21	45512824	45515768	chr21:45512824-45515768	0	-	45512824	45512824	8553170	4	74,140,257,129,	0,594,2071,2815,
#Partially deleted in new
chr21	45513775	45542471	chr21:45513775-45542471	1	-	45515657	45537959	789624	6	2365,142,202,760,238,104,	0,12041,16994,17613,23995,28592,
#Partially deleted in new
chr21	45514714	45542471	chr21:45514714-45542471	1	-	45514975	45537959	789624	6	438,142,202,760,238,104,	0,11102,16055,16674,23056,27653,
#Partially deleted in new
chr21	45515517	45534706	chr21:45515517-45534706	1	-	45515657	45534606	789624	5	623,142,202,760,169,	0,10299,15252,15871,19020,
#Partially deleted in new
chr21	45531790	45541838	chr21:45531790-45541838	0	-	45531790	45537959	789624	3	358,238,52,	0,5980,9996,
#Partially deleted in new
chr21	45531873	45544400	chr21:45531873-45544400	0	-	45531873	45537959	789624	3	275,238,264,	0,5897,12263,
#Deleted in new
chr21	45535983	45537933	chr21:45535983-45537933	0	-	45535983	45535983	8553170	2	545,163,	0,1787,
#Deleted in new
chr21	45537777	45544402	chr21:45537777-45544402	0	-	45537777	45537959	789624	3	231,83,266,	0,5999,6359,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	45593653	45603056	chr21:45593653-45603056	3	+	45593653	45593653	789624	2	55,6666,	0,2737,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	45593677	45597091	chr21:45593677-45597091	1	+	45593677	45593677	8553170	3	31,89,701,	0,1895,2713,
#Partially deleted in new
chr21	45643693	45942454	chr21:45643693-45942454	3	+	45850085	45941706	789624	16	175,38,135,155,24,33,117,132,129,75,42,79,60,53,170,785,	0,91698,206267,252514,255905,256897,257303,265661,267208,270257,273894,286223,287092,291559,296336,297976,
#Partially deleted in new
chr21	45643693	45788739	chr21:45643693-45788739	0	+	45643693	45643693	8553170	4	175,73,38,442,	0,84982,91698,144604,
#Partially deleted in new
chr21	45643709	45669032	chr21:45643709-45669032	0	+	45643709	45643709	8553170	2	159,159,	0,25164,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	45673554	45751056	chr21:45673554-45751056	0	+	45673554	45673554	8553170	6	181,38,107,95,215,54,	0,61837,70676,75826,76572,77448,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	45732724	45750030	chr21:45732724-45750030	0	+	45732724	45732724	8553170	4	32,38,107,650,	0,2667,11506,16656,
#Partially deleted in new
chr21	45735391	45749899	chr21:45735391-45749899	0	+	45735391	45735391	8553170	2	38,519,	0,13989,
#Partially deleted in new
chr21	45748022	45749956	chr21:45748022-45749956	0	+	45748022	45748022	8553170	2	117,576,	0,1358,
#Partially deleted in new
chr21	45749392	45750475	chr21:45749392-45750475	0	+	45749392	45749392	8553170	2	83,603,	0,480,
#Partially deleted in new
chr21	45749683	45751478	chr21:45749683-45751478	0	+	45749683	45749683	8553170	3	620,84,13,	0,1319,1782,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	45750193	45752986	chr21:45750193-45752986	0	+	45750193	45750193	8553170	3	893,153,137,	0,1272,2656,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	45759803	45763758	chr21:45759803-45763758	3	-	45759803	45759803	8553170	1	3955,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	45827960	45836419	chr21:45827960-45836419	3	-	45827960	45827960	789624	3	3281,51,134,	0,4647,8325,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr21	45848162	45942454	chr21:45848162-45942454	1	+	45850085	45941706	789624	14	239,135,155,24,33,117,132,129,75,42,79,53,170,785,	0,1798,48045,51436,52428,52834,61192,62739,65788,69425,81754,87090,91867,93507,
#Partially deleted in new
chr21	45849960	45942454	chr21:45849960-45942454	1	+	45850085	45941706	789624	13	135,155,24,33,117,132,129,42,76,60,53,170,785,	0,46247,49638,50630,51036,59394,60941,67627,79959,80825,85292,90069,91709,
#Partially deleted in new
chr21	45849960	45942454	chr21:45849960-45942454	1	+	45850085	45941706	789624	14	135,155,24,33,117,132,129,75,42,76,60,53,170,785,	0,46247,49638,50630,51036,59394,60941,63990,67627,79959,80825,85292,90069,91709,
#Partially deleted in new
chr21	45849989	45941706	chr21:45849989-45941706	1	+	45896293	45941706	789624	14	106,155,24,33,117,132,129,144,42,76,60,53,170,37,	0,46218,49609,50601,51007,59365,60912,63961,67598,79930,80796,85263,90040,91680,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	45853970	45859777	chr21:45853970-45859777	0	+	45853970	45853970	8553170	5	38,123,130,109,76,	0,4365,4710,4924,5731,
#Deleted in new
chr21	45870853	45873345	chr21:45870853-45873345	3	+	45870853	45870853	8553170	1	2492,	0,
#Deleted in new
chr21	45893876	45896309	chr21:45893876-45896309	0	+	45896293	45896309	8553170	2	141,102,	0,2331,
#Partially deleted in new
chr21	45896269	45942454	chr21:45896269-45942454	0	+	45896269	45941706	789624	12	93,24,33,117,132,129,42,79,60,53,170,785,	0,3329,4321,4727,13085,14632,21318,33647,34516,38983,43760,45400,
#Partially deleted in new
chr21	45896293	45941706	chr21:45896293-45941706	1	+	45896293	45941706	789624	13	69,24,33,117,132,129,144,42,76,60,53,170,37,	0,3305,4297,4703,13061,14608,17657,21294,33626,34492,38959,43736,45376,
#Partially deleted in new
chr21	45901014	45940199	chr21:45901014-45940199	0	+	45901014	45901014	8553170	9	99,132,129,75,42,76,60,53,163,	0,8340,9887,12936,16573,28905,29771,34238,39022,
#Partially deleted in new
chr21	45914037	45941883	chr21:45914037-45941883	0	+	45914037	45914037	8553170	5	57,42,53,170,214,	0,3550,21215,25992,27632,
#Deleted in new
chr21	45914295	45919483	chr21:45914295-45919483	3	+	45914295	45914295	8553170	3	3104,1060,643,	0,3292,4545,
#Deleted in new
chr21	45974488	45974953	chr21:45974488-45974953	3	+	45974488	45974488	8553170	1	465,	0,
#Partially deleted in new
chr21	45981736	46005050	chr21:45981736-46005050	3	+	45981850	46004013	789624	35	211,130,201,160,129,21,21,45,54,45,27,27,45,54,63,63,54,36,63,63,63,63,51,36,63,66,36,37,9,134,110,184,184,30,1660,	0,897,2532,4789,5207,5418,5762,5873,7347,7871,8015,8521,8641,9036,9242,10273,10427,10626,11011,12430,15684,15963,16384,16661,17160,17416,17920,18594,19022,19516,20224,20481,20790,21383,21654,
#Partially deleted in new
chr21	45981768	46004101	chr21:45981768-46004101	1	+	45981850	46004013	789624	34	179,130,201,160,129,21,21,45,54,45,27,27,45,54,63,63,54,36,63,63,63,63,51,36,63,66,36,40,134,110,184,184,30,711,	0,865,2500,4757,5175,5386,5730,5841,7315,7839,7983,8489,8609,9004,9210,10241,10395,10594,10979,12398,15652,15931,16352,16629,17128,17384,17888,18562,19484,20192,20449,20758,21351,21622,
#Deleted in new
chr21	45987108	45987633	chr21:45987108-45987633	0	+	45987108	45987108	8553170	2	411,24,	0,501,
#Deleted in new
chr21	45999399	46000928	chr21:45999399-46000928	0	+	45999399	45999399	8553170	3	293,37,170,	0,931,1359,
#Deleted in new
chr21	46000930	46003149	chr21:46000930-46003149	0	+	46000930	46000930	8553170	6	221,134,110,184,184,30,	0,322,1030,1287,1596,2189,
#Deleted in new
chr21	46001196	46005050	chr21:46001196-46005050	0	+	46001196	46001196	8553170	6	190,110,184,184,30,1660,	0,764,1021,1330,1923,2194,
#Deleted in new
chr21	46002488	46004106	chr21:46002488-46004106	0	+	46002488	46002488	8553170	3	222,30,716,	0,631,902,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	46037051	46039807	chr21:46037051-46039807	3	+	46037051	46037051	8553170	2	847,1351,	0,1405,
#Deleted in new
chr21	46052595	46053105	chr21:46052595-46053105	3	+	46052595	46052595	8553170	2	108,307,	0,203,
#Deleted in new
chr21	46056515	46057567	chr21:46056515-46057567	3	+	46056515	46056515	8553170	2	77,278,	0,774,
#Deleted in new
chr21	46072084	46072248	chr21:46072084-46072248	7	-	46072084	46072084	16724991	1	164,	0,
#Partially deleted in new
chr21	46093263	46097530	chr21:46093263-46097530	3	-	46093263	46093263	8553170	2	613,59,	0,4208,
#Partially deleted in new
chr21	46098096	46132849	chr21:46098096-46132849	3	+	46111476	46132552	789624	28	77,142,599,21,66,54,45,27,27,45,54,63,63,90,63,63,63,63,51,36,63,63,36,46,153,453,39,896,	0,13353,13882,14707,15911,17775,17912,18280,18554,18673,19303,19777,20517,20933,21691,22418,22964,23459,24011,24399,24778,26554,26788,27169,27368,27688,28406,33857,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr21	46098118	46129805	chr21:46098118-46129805	1	+	46111476	46128928	789624	28	55,142,599,21,66,54,45,27,27,45,54,63,63,90,63,63,63,63,51,36,63,63,36,46,153,453,39,903,	0,13331,13860,14685,15889,17753,17890,18258,18532,18651,19281,19755,20495,20911,21669,22396,22942,23437,23989,24377,24756,26532,26766,27147,27346,27666,28384,30784,
#Partially deleted in new
chr21	46098796	46112404	chr21:46098796-46112404	0	+	46111476	46112404	789624	3	351,142,426,	0,12653,13182,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr21	46111413	46129808	chr21:46111413-46129808	1	+	46111476	46128928	789624	27	178,599,21,66,54,45,27,27,45,54,63,63,90,63,63,63,63,51,36,63,63,36,46,153,453,39,906,	0,565,1390,2594,4458,4595,4963,5237,5356,5986,6460,7200,7616,8374,9101,9647,10142,10694,11082,11461,13237,13471,13852,14051,14371,15089,17489,
#Partially deleted in new
chr21	46111449	46129808	chr21:46111449-46129808	1	+	46111476	46129491	789624	27	142,599,21,66,54,45,27,27,45,54,63,63,90,63,63,63,63,51,36,63,63,36,46,153,453,39,613,	0,529,1354,2558,4422,4559,4927,5201,5320,5950,6424,7164,7580,8338,9065,9611,10106,10658,11046,11425,13201,13435,13816,14015,14335,15053,17746,
#Deleted in new
chr21	46112417	46112949	chr21:46112417-46112949	0	+	46112417	46112417	8553170	2	160,146,	0,386,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	46113616	46117521	chr21:46113616-46117521	0	+	46113616	46113616	8553170	7	457,54,45,27,27,45,122,	0,2255,2392,2760,3034,3153,3783,
#Deleted in new
chr21	46120559	46125894	chr21:46120559-46125894	0	+	46120559	46125894	789624	11	18,63,63,51,36,63,63,36,46,201,110,	0,501,996,1548,1936,2315,4091,4325,4706,4857,5225,
#Partially deleted in new
chr21	46136261	46155567	chr21:46136261-46155567	1	-	46136986	46155523	789624	15	233,89,96,139,44,162,130,62,132,138,180,89,129,184,98,	0,723,977,2246,2618,9155,9556,10004,13857,14126,15296,15630,16645,17887,19208,
#Partially deleted in new
chr21	46136261	46155567	chr21:46136261-46155567	1	-	46136453	46155523	789624	15	233,139,96,139,44,162,130,62,132,138,180,89,129,184,98,	0,653,977,2246,2618,9155,9556,10004,13857,14126,15296,15630,16645,17887,19208,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	46136261	46142741	chr21:46136261-46142741	0	-	46136261	46136261	8553170	5	233,159,96,139,633,	0,653,977,2246,5847,
#Deleted in new
chr21	46136261	46137334	chr21:46136261-46137334	0	-	46136261	46136261	8553170	3	233,69,96,	0,723,977,
#Partially deleted in new
chr21	46136261	46155567	chr21:46136261-46155567	2	-	46136261	46136261	8553170	15	233,95,96,139,44,162,130,62,132,138,180,114,129,184,98,	0,717,977,2246,2618,9155,9556,10004,13857,14126,15296,15630,16645,17887,19208,
#Partially deleted in new
chr21	46136778	46155567	chr21:46136778-46155567	1	-	46137245	46155523	789624	13	295,96,139,162,130,62,132,138,180,89,129,184,98,	0,460,1729,8638,9039,9487,13340,13609,14779,15113,16128,17370,18691,
#Partially deleted in new
chr21	46136778	46155567	chr21:46136778-46155567	1	-	46136986	46155523	789624	14	295,96,139,44,162,130,62,132,138,180,89,129,184,98,	0,460,1729,2101,8638,9039,9487,13340,13609,14779,15113,16128,17370,18691,
#Partially deleted in new
chr21	46136778	46138572	chr21:46136778-46138572	0	-	46136813	46138572	789624	3	275,96,65,	0,460,1729,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	46137238	46142669	chr21:46137238-46142669	0	-	46137238	46137238	8553170	4	96,139,44,561,	0,1269,1641,4870,
#Partially deleted in new
chr21	46138529	46145573	chr21:46138529-46145573	0	-	46138529	46138529	8553170	3	117,173,157,	0,350,6887,
#Deleted in new
chr21	46145827	46146926	chr21:46145827-46146926	0	-	46145827	46145827	8553170	3	120,62,136,	0,438,963,
#Deleted in new
chr21	46145828	46146604	chr21:46145828-46146604	0	-	46145828	46145828	8553170	2	119,339,	0,437,
#Deleted in new
chr21	46151613	46152647	chr21:46151613-46152647	3	+	46151613	46151613	8553170	2	146,354,	0,680,
#Partially deleted in new
chr21	46161147	46184476	chr21:46161147-46184476	1	-	46161378	46168389	789624	4	558,152,351,121,	0,768,7160,23208,
#Partially deleted in new
chr21	46161160	46184459	chr21:46161160-46184459	3	-	46161378	46182816	789624	5	545,152,351,1151,104,	0,755,7147,21463,23195,
#Partially deleted in new
chr21	46185078	46188941	chr21:46185078-46188941	3	+	46185078	46185078	8553170	2	109,448,	0,3415,
#Partially deleted in new
chr21	46188140	46228822	chr21:46188140-46228822	3	-	46191103	46228745	0	23	681,170,79,171,81,66,106,97,150,51,72,57,28,98,119,109,136,97,122,109,139,166,91,	0,2925,3740,6350,7535,8061,17695,18531,19287,20110,21413,22547,24884,25597,27039,27544,28248,31335,33713,34489,39411,40293,40591,
#Partially deleted in new
chr21	46188445	46228824	chr21:46188445-46228824	1	-	46191103	46228745	0	22	2790,79,171,81,66,106,97,150,51,72,57,28,98,119,109,136,97,122,109,139,166,93,	0,3435,6045,7230,7756,17390,18226,18982,19805,21108,22242,24579,25292,26734,27239,27943,31030,33408,34184,39106,39988,40286,
#Deleted in new
chr21	46188445	46193487	chr21:46188445-46193487	0	-	46188445	46188445	8553170	3	376,160,1607,	0,2630,3435,
#Deleted in new
chr21	46188473	46194580	chr21:46188473-46194580	0	-	46188581	46194580	789624	3	348,79,90,	0,3407,6017,
#Partially deleted in new
chr21	46189123	46228824	chr21:46189123-46228824	1	-	46191103	46227630	0	21	2112,79,171,81,66,106,97,150,51,72,57,28,98,119,109,136,97,122,109,139,391,	0,2757,5367,6552,7078,16712,17548,18304,19127,20430,21564,23901,24614,26056,26561,27265,30352,32730,33506,38428,39310,
#Deleted in new
chr21	46189124	46193370	chr21:46189124-46193370	0	-	46189124	46189124	8553170	2	2111,1490,	0,2756,
#Partially deleted in new
chr21	46190782	46228781	chr21:46190782-46228781	1	-	46191103	46228745	0	22	453,79,171,81,66,106,97,150,51,72,57,28,98,119,109,136,97,122,76,139,166,50,	0,1098,3708,4893,5419,15053,15889,16645,17468,18771,19905,22242,22955,24397,24902,25606,28693,31071,31880,36769,37651,37949,
#Deleted in new
chr21	46195675	46196371	chr21:46195675-46196371	0	-	46195675	46195675	8553170	2	81,170,	0,526,
#Partially deleted in new
chr21	46215684	46228762	chr21:46215684-46228762	0	-	46215684	46215684	8553170	7	109,136,97,122,109,139,329,	0,704,3791,6169,6945,11867,12749,
#Partially deleted in new
chr21	46216388	46228768	chr21:46216388-46228768	0	-	46216388	46228701	789624	7	136,97,122,109,139,166,84,	0,3087,5465,6241,11163,12045,12296,
#Partially deleted in new
chr21	46220268	46222341	chr21:46220268-46222341	0	+	46220268	46220268	8553170	2	209,579,	0,1494,
#Deleted in new
chr21	46227318	46228774	chr21:46227318-46228774	0	-	46227318	46227318	8553170	3	372,166,43,	0,1115,1413,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	46229216	46259390	chr21:46229216-46259390	2	+	46229216	46229216	8553170	3	50,186,467,	0,11617,29707,
#Partially deleted in new
chr21	46229224	46243750	chr21:46229224-46243750	0	+	46229224	46229224	8553170	3	42,186,344,	0,11609,14182,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	46229230	46251701	chr21:46229230-46251701	1	+	46229230	46229230	789624	4	36,201,186,2116,	0,1096,11603,20355,
#Partially deleted in new
chr21	46229233	46242999	chr21:46229233-46242999	1	+	46229233	46229233	789624	3	33,103,2166,	0,6990,11600,
#Partially deleted in new
chr21	46229239	46242999	chr21:46229239-46242999	0	+	46229239	46229239	8553170	2	27,2166,	0,11594,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	46229243	46251701	chr21:46229243-46251701	0	+	46229243	46229243	789624	3	23,186,2116,	0,11590,20342,
#Partially deleted in new
chr21	46229246	46242999	chr21:46229246-46242999	1	+	46229246	46229246	789624	2	117,2163,	0,11590,
#Partially deleted in new
chr21	46229272	46244865	chr21:46229272-46244865	1	+	46229272	46229272	8553170	3	91,183,315,	0,11564,15278,
#Partially deleted in new
chr21	46229523	46235453	chr21:46229523-46235453	1	+	46229523	46229523	8553170	2	1004,943,	0,4987,
#Partially deleted in new
chr21	46235125	46285394	chr21:46235125-46285394	1	-	46235267	46285286	0	28	301,151,207,130,258,391,98,259,154,135,69,198,153,114,132,101,203,242,161,163,269,198,140,191,145,79,224,1327,	0,1703,5685,7676,8339,9681,11181,11502,16403,19266,19650,21663,23813,25667,26154,28991,30195,30799,31856,35275,37435,38262,40060,42401,44867,45371,48489,48942,
#Partially deleted in new
chr21	46235132	46286297	chr21:46235132-46286297	3	-	46235267	46285286	0	29	294,151,207,130,258,391,98,259,154,135,69,198,153,114,132,101,203,242,161,163,269,198,140,191,145,79,224,1327,147,	0,1696,5678,7669,8332,9674,11174,11495,16396,19259,19643,21656,23806,25660,26147,28984,30188,30792,31849,35268,37428,38255,40053,42394,44860,45364,48482,48935,51018,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr21	46235132	46259265	chr21:46235132-46259265	0	-	46235132	46235132	8553170	13	294,151,207,130,258,391,98,259,154,135,69,198,327,	0,1696,5678,7669,8332,9674,11174,11495,16396,19259,19643,21656,23806,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr21	46235132	46268062	chr21:46235132-46268062	0	-	46235132	46235132	8553170	18	294,151,207,130,258,391,580,154,135,69,198,153,114,132,101,203,242,1081,	0,1696,5678,7669,8332,9674,11174,16396,19259,19643,21656,23806,25660,26147,28984,30188,30792,31849,
#Partially deleted in new
chr21	46235132	46266952	chr21:46235132-46266952	0	-	46235132	46235132	8553170	18	294,151,207,130,258,391,98,259,154,135,69,198,153,114,132,101,203,1028,	0,1696,5678,7669,8332,9674,11174,11495,16396,19259,19643,21656,23806,25660,26147,28984,30188,30792,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	46246889	46247682	chr21:46246889-46247682	3	+	46246889	46246889	8553170	2	342,48,	0,745,
#Partially deleted in new
chr21	46251514	46256986	chr21:46251514-46256986	0	-	46251514	46251514	8553170	4	168,135,69,198,	0,2877,3261,5274,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	46251548	46252834	chr21:46251548-46252834	0	-	46251548	46251548	8553170	2	281,405,	0,881,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	46251811	46254133	chr21:46251811-46254133	3	-	46251811	46251811	8553170	2	310,1704,	0,618,
#Partially deleted in new
chr21	46256475	46259096	chr21:46256475-46259096	0	-	46256475	46256475	8553170	2	511,158,	0,2463,
#Partially deleted in new
chr21	46270262	46272623	chr21:46270262-46272623	0	-	46270262	46270262	8553170	2	301,63,	0,2298,
#Partially deleted in new
chr21	46285004	46286184	chr21:46285004-46286184	0	-	46285004	46285286	789624	2	390,486,	0,694,
#Partially deleted in new
chr21	46285290	46285897	chr21:46285290-46285897	0	-	46285290	46285290	8553170	2	104,95,	0,512,
#Partially deleted in new
chr21	46286336	46297751	chr21:46286336-46297751	3	+	46286913	46297634	789624	5	79,254,129,69,213,	0,533,4997,9825,11202,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	46286354	46291930	chr21:46286354-46291930	0	+	46286354	46286354	8553170	3	61,254,597,	0,515,4979,
#Partially deleted in new
chr21	46286383	46297751	chr21:46286383-46297751	1	+	46286913	46297634	789624	5	354,254,129,69,213,	0,486,4950,9778,11155,
#Partially deleted in new
chr21	46286383	46297751	chr21:46286383-46297751	1	+	46286913	46297634	789624	4	354,254,69,213,	0,486,9778,11155,
#Partially deleted in new
chr21	46286383	46297751	chr21:46286383-46297751	1	+	46286913	46297634	789624	4	32,119,69,213,	0,486,9778,11155,
#Partially deleted in new
chr21	46286383	46297723	chr21:46286383-46297723	1	+	46286913	46297634	789624	5	32,119,129,69,185,	0,486,4950,9778,11155,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr21	46286453	46292197	chr21:46286453-46292197	0	+	46286453	46286453	8553170	3	284,254,864,	0,416,4880,
#Partially deleted in new
chr21	46286644	46297751	chr21:46286644-46297751	1	+	46286913	46297634	789624	5	99,254,129,69,213,	0,225,4689,9517,10894,
#Partially deleted in new
chr21	46300510	46318206	chr21:46300510-46318206	0	-	46301998	46318206	789624	8	215,158,92,112,165,74,61,195,	0,1486,1974,10945,14205,14963,16697,17501,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr21	46301129	46323875	chr21:46301129-46323875	3	-	46301998	46322738	789624	8	1025,92,112,165,74,61,209,1237,	0,1355,10326,13586,14344,16078,16882,21509,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr21	46301129	46323875	chr21:46301129-46323875	1	-	46301998	46315006	789624	9	584,158,92,112,334,74,141,209,1237,	0,867,1355,10326,13586,14344,16078,16882,21509,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	46301133	46319137	chr21:46301133-46319137	1	-	46301998	46315006	789624	7	1021,92,112,334,74,141,1126,	0,1351,10322,13582,14340,16074,16878,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr21	46301133	46323857	chr21:46301133-46323857	1	-	46301998	46315006	789624	8	1021,92,112,334,74,61,209,721,	0,1351,10322,13582,14340,16074,16878,22003,
#Partially deleted in new
chr21	46301709	46311631	chr21:46301709-46311631	0	-	46301709	46301709	8553170	3	445,92,176,	0,775,9746,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr21	46314870	46323869	chr21:46314870-46323869	0	-	46314870	46315006	789624	6	179,74,61,209,177,1231,	0,603,2337,3141,3914,7768,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	46314870	46323869	chr21:46314870-46323869	0	-	46314870	46314870	8553170	4	677,61,209,1231,	0,2337,3141,7768,
#Partially deleted in new
chr21	46324121	46445769	chr21:46324121-46445769	3	+	46324228	46445327	789624	47	161,213,372,81,256,56,175,137,112,223,82,175,218,455,556,147,152,143,233,163,213,230,117,21,207,171,153,879,156,771,103,155,141,174,196,223,151,687,245,103,174,120,230,77,139,128,486,	0,2255,10275,22006,22621,23335,24890,25562,27307,28982,29865,31330,32852,39358,42462,57572,61710,64620,65077,66548,67042,73143,73892,74113,75468,77429,78209,87067,88715,91947,94082,97848,101709,103500,104273,105888,106385,107407,111782,112857,114042,115961,116733,118375,119688,120572,121162,
#Partially deleted in new
chr21	46324140	46349800	chr21:46324140-46349800	0	+	46324140	46324140	8553170	8	142,213,372,81,259,56,175,117,	0,2236,10256,21987,22582,23316,24871,25543,
#Partially deleted in new
chr21	46324887	46445769	chr21:46324887-46445769	0	+	46324887	46324887	8553170	47	323,213,372,81,256,56,175,137,112,223,82,175,218,455,556,147,152,143,233,163,213,230,117,21,207,171,153,879,156,771,103,155,141,174,196,223,151,450,245,103,174,120,230,77,139,128,486,	0,1489,9509,21240,21855,22569,24124,24796,26541,28216,29099,30564,32086,38592,41696,56806,60944,63854,64311,65782,66276,72377,73126,73347,74702,76663,77443,86301,87949,91181,93316,97082,100943,102734,103507,105122,105619,106641,111016,112091,113276,115195,115967,117609,118922,119806,120396,
#Partially deleted in new
chr21	46346137	46353303	chr21:46346137-46353303	0	+	46346137	46346137	8553170	6	71,256,56,175,137,200,	0,605,1319,2874,3546,6966,
#Partially deleted in new
chr21	46348238	46353326	chr21:46348238-46353326	0	+	46348238	46348238	8553170	5	87,175,137,112,223,	0,773,1445,3190,4865,
#Deleted in new
chr21	46420552	46421034	chr21:46420552-46421034	7	-	46420552	46420552	16724991	1	482,	0,
#Deleted in new
chr21	46431258	46432035	chr21:46431258-46432035	0	+	46431258	46431258	8553170	2	71,507,	0,270,
#Partially deleted in new
chr21	46437040	46445437	chr21:46437040-46445437	0	+	46437040	46445327	789624	6	41,174,120,230,77,154,	0,1123,3042,3814,5456,8243,
#Deleted in new
chr21	46440993	46443172	chr21:46440993-46443172	0	+	46440993	46440993	8553170	2	91,676,	0,1503,
#Boundary problem: need 38, got 0, diff 38, mapped 0.0
chr21	46458898	46569708	chr21:46458898-46569708	1	+	46459131	46567622	789624	38	324,72,120,120,252,129,120,186,92,111,124,110,103,65,94,120,115,140,137,81,128,115,202,110,81,124,122,112,110,131,169,171,62,58,75,175,124,2339,	0,25858,31701,38089,39683,45462,50358,52530,70193,73228,74625,75105,75686,78325,78547,79584,80978,82857,86238,86982,88016,90872,91644,92735,92925,95270,95676,95923,97083,98040,98686,99324,101823,102849,104959,106814,107661,108471,
#Partially deleted in new
chr21	46458949	46550110	chr21:46458949-46550110	1	+	46459131	46549918	789624	22	273,72,120,120,252,129,120,198,92,111,124,110,103,65,94,120,115,140,137,81,128,340,	0,25807,31650,38038,39632,45411,50307,52467,70142,73177,74574,75054,75635,78274,78496,79533,80927,82806,86187,86931,87965,90821,
#Partially deleted in new
chr21	46458976	46547205	chr21:46458976-46547205	1	+	46459131	46547046	789624	20	246,72,120,120,252,120,198,92,111,124,110,103,65,94,120,115,140,137,81,291,	0,25780,31623,38011,39605,50280,52440,70115,73150,74547,75027,75608,78247,78469,79506,80900,82779,86160,86904,87938,
#Partially deleted in new
chr21	46459056	46547205	chr21:46459056-46547205	1	+	46459131	46547046	789624	21	166,72,120,120,252,129,120,198,92,111,124,110,103,65,94,120,115,140,137,81,291,	0,25700,31543,37931,39525,45304,50200,52360,70035,73070,74467,74947,75528,78167,78389,79426,80820,82699,86080,86824,87858,
#Boundary problem: need 38, got 0, diff 38, mapped 0.0
chr21	46459110	46569852	chr21:46459110-46569852	3	+	46459131	46567622	789624	38	112,72,120,120,252,129,120,198,92,111,124,110,103,65,94,120,115,140,137,81,128,115,202,110,81,124,122,112,110,131,169,171,62,58,75,175,124,2483,	0,25646,31489,37877,39471,45250,50146,52306,69981,73016,74413,74893,75474,78113,78335,79372,80766,82645,86026,86770,87804,90660,91432,92523,92713,95058,95464,95711,96871,97828,98474,99112,101611,102637,104747,106602,107449,108259,
#Partially deleted in new
chr21	46462470	46469306	chr21:46462470-46469306	3	+	46462470	46462470	789624	4	52,52,163,161,	0,241,595,6675,
#Partially deleted in new
chr21	46504312	46545205	chr21:46504312-46545205	0	+	46504312	46504312	8553170	14	177,120,198,92,111,124,110,103,65,94,120,115,140,69,	0,4944,7104,24779,27814,29211,29691,30272,32911,33133,34170,35564,37443,40824,
#Partially deleted in new
chr21	46504379	46546304	chr21:46504379-46546304	0	+	46504379	46504379	8553170	15	110,120,198,92,111,124,110,103,65,94,120,115,140,137,424,	0,4877,7037,24712,27747,29144,29624,30205,32844,33066,34103,35497,37376,40757,41501,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr21	46525617	46525722	chr21:46525617-46525722	3	+	46525617	46525617	8553170	1	105,	0,
#Partially deleted in new
chr21	46538734	46547205	chr21:46538734-46547205	0	+	46538734	46538734	8553170	5	1257,140,137,81,291,	0,3021,6402,7146,8180,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr21	46552910	46558738	chr21:46552910-46558738	0	+	46552910	46552910	8553170	7	1382,122,112,110,131,169,516,	0,1664,1911,3071,4028,4674,5312,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr21	46555518	46559106	chr21:46555518-46559106	0	+	46555518	46555518	8553170	2	2235,884,	0,2704,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr21	46561284	46569708	chr21:46561284-46569708	0	+	46561284	46561284	8553170	5	521,75,175,124,2339,	0,2573,4428,5275,6085,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	46563659	46569708	chr21:46563659-46569708	0	+	46563659	46563659	8553170	4	273,175,124,2339,	0,2053,2900,3710,
#Partially deleted in new
chr21	46598961	46605208	chr21:46598961-46605208	3	-	46599362	46602415	0	3	542,139,196,	0,3316,6051,
#Partially deleted in new
chr21	46599280	46602893	chr21:46599280-46602893	1	-	46599362	46602415	0	2	223,616,	0,2997,
#Partially deleted in new
chr21	46635166	46664951	chr21:46635166-46664951	3	+	46636951	46664327	0	12	597,109,95,105,183,162,165,176,130,137,172,657,	0,1272,1729,8368,9139,13291,14408,23578,25666,26633,28216,29128,
#Partially deleted in new
chr21	46635594	46665117	chr21:46635594-46665117	1	+	46636951	46664334	0	8	169,95,105,183,162,165,176,823,	0,1301,7940,8711,12863,13980,23150,28700,
#Partially deleted in new
chr21	46635594	46665117	chr21:46635594-46665117	1	+	46636951	46664374	0	8	169,95,105,183,162,165,172,823,	0,1301,7940,8711,12863,13980,27788,28700,
#Partially deleted in new
chr21	46635614	46664951	chr21:46635614-46664951	1	+	46636951	46664327	0	11	149,95,105,183,162,165,176,130,137,172,657,	0,1281,7920,8691,12843,13960,23130,25218,26185,27768,28680,
#Partially deleted in new
chr21	46635641	46664473	chr21:46635641-46664473	1	+	46636951	46664327	0	7	122,95,105,183,162,165,179,	0,1254,7893,8664,12816,13933,28653,
#Partially deleted in new
chr21	46635649	46664951	chr21:46635649-46664951	1	+	46636951	46664327	0	11	898,95,105,183,162,165,176,130,137,172,657,	0,1246,7885,8656,12808,13925,23095,25183,26150,27733,28645,
#Partially deleted in new
chr21	46635652	46652318	chr21:46635652-46652318	1	+	46636951	46652006	0	7	111,95,105,183,162,165,513,	0,1243,7882,8653,12805,13922,16153,
#Partially deleted in new
chr21	46635673	46649893	chr21:46635673-46649893	1	+	46636951	46649847	789624	6	90,95,105,183,162,319,	0,1222,7861,8632,12784,13901,
#Partially deleted in new
chr21	46635680	46665124	chr21:46635680-46665124	1	+	46636951	46664327	0	9	83,95,105,183,162,165,137,172,830,	0,1215,7854,8625,12777,13894,26119,27702,28614,
#Partially deleted in new
chr21	46643285	46661270	chr21:46643285-46661270	0	+	46643285	46643285	8553170	6	354,183,162,165,176,438,	0,1020,5172,6289,15459,17547,
#Partially deleted in new
chr21	46643533	46659430	chr21:46643533-46659430	1	+	46648472	46658919	789624	7	106,183,81,80,166,54,631,	0,772,4924,5006,6040,15211,15266,
#Partially deleted in new
chr21	46643534	46659430	chr21:46643534-46659430	0	+	46643534	46643534	8553170	5	105,183,162,165,686,	0,771,4923,6040,15210,
#Partially deleted in new
chr21	46644342	46652952	chr21:46644342-46652952	0	+	46644342	46652952	789624	4	146,162,165,108,	0,4115,5232,8502,
#Deleted in new
chr21	46648317	46649888	chr21:46648317-46649888	0	+	46648317	46648317	8553170	2	302,314,	0,1257,
#Deleted in new
chr21	46648507	46649893	chr21:46648507-46649893	0	+	46648507	46648507	8553170	2	112,381,	0,1005,
#Deleted in new
chr21	46653557	46654022	chr21:46653557-46654022	7	-	46653557	46653557	16724991	1	465,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr21	46656822	46664951	chr21:46656822-46664951	0	+	46656822	46656822	8553170	4	2098,1104,172,657,	0,4010,6560,7472,
#Partially deleted in new
chr21	46690763	46691226	chr21:46690763-46691226	7	+	46690763	46690763	16724991	1	463,	0,
#Deleted in new
chr21_GL383579v2_alt	6977	14055	chr21_GL383579v2_alt:6977-14055	3	+	6977	6977	789624	5	103,56,139,135,193,	0,2320,5309,5527,6885,
#Deleted in new
chr21_GL383579v2_alt	32224	33610	chr21_GL383579v2_alt:32224-33610	7	-	32224	32224	16724991	1	1386,	0,
#Deleted in new
chr21_GL383579v2_alt	51476	51826	chr21_GL383579v2_alt:51476-51826	7	-	51476	51476	16724991	1	350,	0,
#Deleted in new
chr21_GL383579v2_alt	102718	102859	chr21_GL383579v2_alt:102718-102859	3	+	102718	102718	8553170	1	141,	0,
#Deleted in new
chr21_GL383579v2_alt	107465	110340	chr21_GL383579v2_alt:107465-110340	3	+	107465	107465	8553170	2	306,79,	0,2796,
#Deleted in new
chr21_GL383580v2_alt	735	2590	chr21_GL383580v2_alt:735-2590	0	-	735	2590	789624	2	129,343,	0,1512,
#Deleted in new
chr21_GL383580v2_alt	735	2780	chr21_GL383580v2_alt:735-2780	3	-	735	2590	789624	2	129,533,	0,1512,
#Deleted in new
chr21_GL383580v2_alt	735	2714	chr21_GL383580v2_alt:735-2714	0	-	735	735	8553170	2	129,467,	0,1512,
#Deleted in new
chr21_GL383580v2_alt	735	2590	chr21_GL383580v2_alt:735-2590	0	-	735	735	8553170	2	129,343,	0,1512,
#Deleted in new
chr21_GL383580v2_alt	735	2609	chr21_GL383580v2_alt:735-2609	0	-	735	735	8553170	2	129,362,	0,1512,
#Deleted in new
chr21_GL383580v2_alt	3021	29891	chr21_GL383580v2_alt:3021-29891	3	+	3021	3021	789624	4	209,123,90,2031,	0,12697,16512,24839,
#Deleted in new
chr21_GL383580v2_alt	3046	28629	chr21_GL383580v2_alt:3046-28629	0	+	3046	3046	8553170	2	148,769,	0,24814,
#Deleted in new
chr21_GL383580v2_alt	3071	15841	chr21_GL383580v2_alt:3071-15841	0	+	3071	3071	8553170	2	123,145,	0,12625,
#Deleted in new
chr21_GL383580v2_alt	3082	15841	chr21_GL383580v2_alt:3082-15841	0	+	3082	3082	8553170	2	148,123,	0,12636,
#Deleted in new
chr21_GL383580v2_alt	3083	28090	chr21_GL383580v2_alt:3083-28090	0	+	3083	3083	8553170	4	159,123,90,230,	0,12635,16450,24777,
#Deleted in new
chr21_GL383580v2_alt	3095	28368	chr21_GL383580v2_alt:3095-28368	0	+	3095	3095	8553170	3	135,90,508,	0,16438,24765,
#Deleted in new
chr21_GL383580v2_alt	3109	28016	chr21_GL383580v2_alt:3109-28016	0	+	3109	3109	8553170	3	121,123,156,	0,12609,24751,
#Deleted in new
chr21_GL383580v2_alt	21594	22426	chr21_GL383580v2_alt:21594-22426	3	-	21594	21594	8553170	1	832,	0,
#Deleted in new
chr21_GL383580v2_alt	24485	44650	chr21_GL383580v2_alt:24485-44650	3	-	24683	25343	789624	3	922,81,152,	0,16995,20013,
#Deleted in new
chr21_GL383580v2_alt	24486	44586	chr21_GL383580v2_alt:24486-44586	1	-	24683	25343	789624	2	921,88,	0,20012,
#Deleted in new
chr21_GL383580v2_alt	24606	44596	chr21_GL383580v2_alt:24606-44596	0	-	24683	44596	789624	3	699,81,98,	0,16874,19892,
#Deleted in new
chr21_GL383580v2_alt	24642	44541	chr21_GL383580v2_alt:24642-44541	1	-	24683	25343	789624	4	765,75,81,43,	0,13921,16838,19856,
#Deleted in new
chr21_GL383581v2_alt	5407	26788	chr21_GL383581v2_alt:5407-26788	0	+	5407	6099	789624	6	57,131,133,206,149,40,	0,609,4052,10644,16048,21341,
#Deleted in new
chr21_GL383581v2_alt	5407	32093	chr21_GL383581v2_alt:5407-32093	3	+	5407	31534	789624	7	57,133,206,149,160,158,694,	0,4052,10644,16048,21341,21878,25992,
#Deleted in new
chr21_GL383581v2_alt	5412	32074	chr21_GL383581v2_alt:5412-32074	0	+	5412	31534	789624	7	52,133,206,149,160,158,675,	0,4047,10639,16043,21336,21873,25987,
#Deleted in new
chr21_GL383581v2_alt	9459	32093	chr21_GL383581v2_alt:9459-32093	0	+	9459	31534	0	6	133,206,149,160,158,694,	0,6592,11996,17289,17826,21940,
#Deleted in new
chr21_GL383581v2_alt	16051	31516	chr21_GL383581v2_alt:16051-31516	0	+	16051	16092	789624	5	206,149,160,158,117,	0,5404,10697,11234,15348,
#Deleted in new
chr21_GL383581v2_alt	26890	83477	chr21_GL383581v2_alt:26890-83477	0	+	26890	82932	789624	3	18,158,551,	0,395,56036,
#Deleted in new
chr21_GL383581v2_alt	27056	84072	chr21_GL383581v2_alt:27056-84072	0	-	45389	63466	789624	9	318,84,2082,58,93,68,113,140,106,	0,6729,16297,23242,27928,32858,34526,36311,56910,
#Deleted in new
chr21_GL383581v2_alt	27056	43536	chr21_GL383581v2_alt:27056-43536	0	-	27056	27056	8553170	4	318,110,84,183,	0,4398,6729,16297,
#Deleted in new
chr21_GL383581v2_alt	27369	43982	chr21_GL383581v2_alt:27369-43982	0	-	27369	27369	8553170	4	5,84,98,177,	0,6416,15984,16436,
#Deleted in new
chr21_GL383581v2_alt	31455	43761	chr21_GL383581v2_alt:31455-43761	0	-	31455	31455	8553170	4	109,84,123,408,	0,2330,10134,11898,
#Deleted in new
chr21_GL383581v2_alt	43706	84140	chr21_GL383581v2_alt:43706-84140	3	-	45389	63466	789624	7	1729,58,93,68,113,140,174,	0,6592,11278,16208,17876,19661,40260,
#Deleted in new
chr21_GL383581v2_alt	45092	63507	chr21_GL383581v2_alt:45092-63507	0	-	55041	63466	789624	4	343,58,93,140,	0,5206,9892,18275,
#Deleted in new
chr21_GL383581v2_alt	45118	84065	chr21_GL383581v2_alt:45118-84065	0	-	50586	63466	789624	8	317,58,94,93,68,113,140,99,	0,5180,5457,9866,14796,16464,18249,38848,
#Deleted in new
chr21_GL383581v2_alt	59590	61708	chr21_GL383581v2_alt:59590-61708	0	-	59590	59590	8553170	2	392,126,	0,1992,
#Deleted in new
chr21_GL383581v2_alt	59950	83418	chr21_GL383581v2_alt:59950-83418	0	-	59950	63466	789624	5	32,113,140,153,181,	0,1632,3417,4161,23287,
#Deleted in new
chr21_GL383581v2_alt	63000	84077	chr21_GL383581v2_alt:63000-84077	0	-	63000	63000	8553170	2	507,111,	0,20966,
#Deleted in new
chr21_GL383581v2_alt	85708	86324	chr21_GL383581v2_alt:85708-86324	7	-	85708	85708	16724991	1	616,	0,
#Deleted in new
chr21_GL383581v2_alt	86627	88387	chr21_GL383581v2_alt:86627-88387	3	-	86627	86627	8553170	3	90,54,522,	0,507,1238,
#Deleted in new
chr21_GL383581v2_alt	89658	95603	chr21_GL383581v2_alt:89658-95603	3	-	92355	93522	789624	3	219,1610,408,	0,2285,5537,
#Deleted in new
chr21_GL383581v2_alt	92318	95850	chr21_GL383581v2_alt:92318-95850	1	-	92355	93522	789624	2	1235,119,	0,3413,
#Deleted in new
chr21_GL383581v2_alt	92336	95603	chr21_GL383581v2_alt:92336-95603	1	-	92355	93522	789624	2	1217,408,	0,2859,
#Deleted in new
chr21_GL383581v2_alt	92347	95821	chr21_GL383581v2_alt:92347-95821	1	-	92355	93522	789624	2	1206,274,	0,3200,
#Deleted in new
chr21_GL383581v2_alt	102652	115487	chr21_GL383581v2_alt:102652-115487	0	-	103188	115487	789624	6	575,116,142,131,138,106,	0,5889,7038,7451,11260,12729,
#Deleted in new
chr21_GL383581v2_alt	102762	102810	chr21_GL383581v2_alt:102762-102810	0	-	102762	102762	8553170	1	48,	0,
#Deleted in new
chr21_GL383581v2_alt	108060	115588	chr21_GL383581v2_alt:108060-115588	0	-	108253	115588	0	6	385,116,142,131,138,207,	0,481,1630,2043,5852,7321,
#Deleted in new
chr21_GL383581v2_alt	108060	115588	chr21_GL383581v2_alt:108060-115588	3	-	108253	115588	0	6	385,116,142,131,138,207,	0,481,1630,2043,5852,7321,
#Deleted in new
chr21_GL383581v2_alt	108060	115588	chr21_GL383581v2_alt:108060-115588	0	-	108253	115588	0	6	385,116,142,131,138,207,	0,481,1630,2043,5852,7321,
#Deleted in new
chr21_GL383581v2_alt	108062	115588	chr21_GL383581v2_alt:108062-115588	0	-	108062	108062	8553170	6	383,116,142,131,138,207,	0,479,1628,2041,5850,7319,
#Deleted in new
chr21_GL383581v2_alt	110169	114463	chr21_GL383581v2_alt:110169-114463	0	-	110169	110169	8553170	2	65,551,	0,3743,
#Deleted in new
chr21_GL383581v2_alt	113317	115434	chr21_GL383581v2_alt:113317-115434	0	-	113317	113317	8553170	2	733,53,	0,2064,
#Deleted in new
chr21_KI270872v1_alt	1167	1800	chr21_KI270872v1_alt:1167-1800	0	-	1167	1167	8553170	1	633,	0,
#Deleted in new
chr21_KI270872v1_alt	1167	1728	chr21_KI270872v1_alt:1167-1728	0	-	1167	1167	8553170	1	561,	0,
#Deleted in new
chr21_KI270872v1_alt	4475	14626	chr21_KI270872v1_alt:4475-14626	0	-	4475	14582	789624	10	162,130,62,132,138,180,89,129,184,98,	0,401,849,4702,4971,6141,6475,7490,8732,10053,
#Deleted in new
chr21_KI270872v1_alt	4475	14626	chr21_KI270872v1_alt:4475-14626	0	-	4475	14582	789624	10	162,130,62,132,138,180,89,129,184,98,	0,401,849,4702,4971,6141,6475,7490,8732,10053,
#Deleted in new
chr21_KI270872v1_alt	4475	14626	chr21_KI270872v1_alt:4475-14626	3	-	4475	14582	789624	10	162,130,62,132,138,180,89,129,184,98,	0,401,849,4702,4971,6141,6475,7490,8732,10053,
#Deleted in new
chr21_KI270872v1_alt	4475	4632	chr21_KI270872v1_alt:4475-4632	0	-	4475	4475	8553170	1	157,	0,
#Deleted in new
chr21_KI270872v1_alt	4475	14626	chr21_KI270872v1_alt:4475-14626	0	-	4475	4475	8553170	10	162,130,62,132,138,180,114,129,184,98,	0,401,849,4702,4971,6141,6475,7490,8732,10053,
#Deleted in new
chr21_KI270872v1_alt	4475	14626	chr21_KI270872v1_alt:4475-14626	0	-	4475	14582	789624	10	162,130,62,132,138,180,89,129,184,98,	0,401,849,4702,4971,6141,6475,7490,8732,10053,
#Deleted in new
chr21_KI270872v1_alt	4886	5985	chr21_KI270872v1_alt:4886-5985	0	-	4886	4886	8553170	3	120,62,136,	0,438,963,
#Deleted in new
chr21_KI270872v1_alt	4887	5663	chr21_KI270872v1_alt:4887-5663	0	-	4887	4887	8553170	2	119,339,	0,437,
#Deleted in new
chr21_KI270872v1_alt	10672	11706	chr21_KI270872v1_alt:10672-11706	3	+	10672	10672	8553170	2	146,354,	0,680,
#Deleted in new
chr21_KI270872v1_alt	20584	45846	chr21_KI270872v1_alt:20584-45846	3	-	20815	27832	789624	4	558,152,351,121,	0,768,7166,25141,
#Deleted in new
chr21_KI270872v1_alt	20597	45829	chr21_KI270872v1_alt:20597-45829	1	-	20815	44186	789624	5	545,152,351,1151,104,	0,755,7153,23396,25128,
#Deleted in new
chr21_KI270872v1_alt	46448	50311	chr21_KI270872v1_alt:46448-50311	3	+	46448	46448	8553170	2	109,448,	0,3415,
#Deleted in new
chr21_KI270872v1_alt	49510	80942	chr21_KI270872v1_alt:49510-80942	0	-	52473	80942	789624	18	681,170,79,171,81,66,106,97,150,51,72,57,28,98,119,109,136,97,	0,2925,3740,6350,7535,8061,17695,18531,19287,20110,21413,22547,24884,25597,27039,27544,28248,31335,
#Deleted in new
chr21_KI270872v1_alt	49815	54857	chr21_KI270872v1_alt:49815-54857	0	-	49815	49815	8553170	3	376,160,1607,	0,2630,3435,
#Deleted in new
chr21_KI270872v1_alt	49815	80942	chr21_KI270872v1_alt:49815-80942	3	-	52473	80942	789624	17	2790,79,171,81,66,106,97,150,51,72,57,28,98,119,109,136,97,	0,3435,6045,7230,7756,17390,18226,18982,19805,21108,22242,24579,25292,26734,27239,27943,31030,
#Deleted in new
chr21_KI270872v1_alt	49843	55950	chr21_KI270872v1_alt:49843-55950	0	-	49951	55950	789624	3	348,79,90,	0,3407,6017,
#Deleted in new
chr21_KI270872v1_alt	50494	54740	chr21_KI270872v1_alt:50494-54740	0	-	50494	50494	8553170	2	2111,1490,	0,2756,
#Deleted in new
chr21_KI270872v1_alt	52152	80942	chr21_KI270872v1_alt:52152-80942	0	-	52473	80942	789624	17	453,79,171,81,66,106,97,150,51,72,57,28,98,119,109,136,97,	0,1098,3708,4893,5419,15053,15889,16645,17468,18771,19905,22242,22955,24397,24902,25606,28693,
#Deleted in new
chr21_KI270872v1_alt	57045	57741	chr21_KI270872v1_alt:57045-57741	0	-	57045	57045	8553170	2	81,170,	0,526,
#Deleted in new
chr21_KI270872v1_alt	77054	80942	chr21_KI270872v1_alt:77054-80942	0	-	77054	77054	8553170	3	109,136,97,	0,704,3791,
#Deleted in new
chr21_KI270872v1_alt	77758	80942	chr21_KI270872v1_alt:77758-80942	0	-	77758	80942	789624	2	136,97,	0,3087,
#Deleted in new
chr21_KI270873v1_alt	450	9150	chr21_KI270873v1_alt:450-9150	3	-	450	5450	789624	4	132,138,181,146,	0,715,4827,8554,
#Deleted in new
chr21_KI270873v1_alt	1165	9253	chr21_KI270873v1_alt:1165-9253	0	-	1165	5450	789624	3	138,181,249,	0,4112,7839,
#Deleted in new
chr21_KI270873v1_alt	1165	1439	chr21_KI270873v1_alt:1165-1439	0	-	1165	1165	8553170	1	274,	0,
#Deleted in new
chr21_KI270873v1_alt	3802	9203	chr21_KI270873v1_alt:3802-9203	0	-	3802	3802	8553170	3	171,181,199,	0,1475,5202,
#Deleted in new
chr21_KI270873v1_alt	5080	9157	chr21_KI270873v1_alt:5080-9157	0	-	5080	5080	8553170	2	378,153,	0,3924,
#Deleted in new
chr21_KI270873v1_alt	5312	9251	chr21_KI270873v1_alt:5312-9251	0	-	5312	5450	789624	3	146,118,247,	0,2650,3692,
#Deleted in new
chr21_KI270873v1_alt	8049	29505	chr21_KI270873v1_alt:8049-29505	3	+	8049	8049	8553170	3	344,157,51,	0,15149,21405,
#Deleted in new
chr21_KI270873v1_alt	8078	10419	chr21_KI270873v1_alt:8078-10419	0	+	8078	8078	789624	1	2341,	0,
#Deleted in new
chr21_KI270873v1_alt	55581	56690	chr21_KI270873v1_alt:55581-56690	3	-	55581	55581	8553170	2	394,122,	0,987,
#Deleted in new
chr21_KI270873v1_alt	101713	103761	chr21_KI270873v1_alt:101713-103761	3	+	101713	101713	8553170	1	2048,	0,
#Deleted in new
chr21_KI270873v1_alt	128745	138502	chr21_KI270873v1_alt:128745-138502	3	-	128745	128745	8553170	2	518,331,	0,9426,
#Deleted in new
chr21_KI270873v1_alt	128920	129930	chr21_KI270873v1_alt:128920-129930	0	-	128920	128920	8553170	2	343,75,	0,935,
#Deleted in new
chr21_KI270874v1_alt	63576	64455	chr21_KI270874v1_alt:63576-64455	7	-	63576	63576	16724991	1	879,	0,
#Deleted in new
chr21_KI270874v1_alt	152528	152906	chr21_KI270874v1_alt:152528-152906	7	+	152528	152528	16724991	1	378,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	10736170	10736283	chr22:10736170-10736283	3	-	10736170	10736170	8553170	1	113,	0,
#Partially deleted in new
chr22	10939387	10961338	chr22:10939387-10961338	7	-	10939387	10939387	16724991	9	36,111,90,87,115,58,126,70,56,	0,1209,2303,5579,7916,9824,10661,19679,21895,
#Deleted in new
chr22	11066417	11068174	chr22:11066417-11068174	3	+	11066417	11066417	8553170	2	98,190,	0,1567,
#Deleted in new
chr22	11124336	11125705	chr22:11124336-11125705	7	+	11124336	11124336	16724991	2	43,1198,	0,171,
#Deleted in new
chr22	11249808	11249959	chr22:11249808-11249959	3	-	11249808	11249808	8553170	1	151,	0,
#Partially deleted in new
chr22	12602465	12626642	chr22:12602465-12626642	7	+	12602465	12602465	16724991	9	62,70,126,58,119,101,90,112,36,	0,2204,12943,13848,15705,18372,21776,22851,24141,
#Deleted in new
chr22	15273854	15273961	chr22:15273854-15273961	3	+	15273854	15273854	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	15282556	15288670	chr22:15282556-15288670	3	-	15282556	15282556	8553170	1	6114,	0,
#Partially deleted in new
chr22	15290717	15297196	chr22:15290717-15297196	7	+	15290717	15290717	16724991	5	119,30,79,103,40,	0,277,4614,5012,6439,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	15298377	15304556	chr22:15298377-15304556	3	-	15298377	15298377	8553170	1	6179,	0,
#Partially deleted in new
chr22	15326036	15343065	chr22:15326036-15343065	7	-	15326036	15326036	16724991	3	1720,67,121,	0,16323,16908,
#Deleted in new
chr22	15349466	15350043	chr22:15349466-15350043	7	+	15349466	15349466	16724991	1	577,	0,
#Partially deleted in new
chr22	15489989	15492564	chr22:15489989-15492564	7	+	15489989	15489989	16724991	3	142,76,79,	0,882,2496,
#Deleted in new
chr22	15528158	15529139	chr22:15528158-15529139	3	+	15528158	15529139	789624	1	981,	0,
#Deleted in new
chr22	15528191	15529139	chr22:15528191-15529139	1	+	15528191	15529139	789624	1	948,	0,
#Partially deleted in new
chr22	15541435	15578006	chr22:15541435-15578006	7	+	15541435	15541435	16724991	4	172,181,175,40,	0,17010,34176,36531,
#Partially deleted in new
chr22	15550903	15553838	chr22:15550903-15553838	7	-	15550903	15550903	16724991	3	1984,376,148,	0,2307,2787,
#Deleted in new
chr22	15557576	15560694	chr22:15557576-15560694	3	-	15557576	15557576	8553170	3	1015,109,170,	0,2579,2948,
#Deleted in new
chr22	15562016	15564276	chr22:15562016-15564276	7	-	15562016	15562016	16724991	1	2260,	0,
#Partially deleted in new
chr22	15572088	15573265	chr22:15572088-15573265	7	-	15572088	15572088	16724991	1	1177,	0,
#Deleted in new
chr22	15588360	15588478	chr22:15588360-15588478	7	+	15588360	15588360	16724991	1	118,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	15600907	15604882	chr22:15600907-15604882	3	-	15600907	15600907	8553170	3	1607,82,41,	0,3144,3934,
#Deleted in new
chr22	15611758	15613096	chr22:15611758-15613096	7	-	15611758	15611758	16724991	1	1338,	0,
#Deleted in new
chr22	15615401	15615578	chr22:15615401-15615578	7	-	15615401	15615401	16724991	1	177,	0,
#Partially deleted in new
chr22	15622600	15632051	chr22:15622600-15632051	7	-	15622600	15622600	16724991	11	112,85,136,139,430,79,67,205,154,109,133,	0,1386,1938,2355,2871,4731,5049,5781,7137,8829,9318,
#Partially deleted in new
chr22	15635179	15644330	chr22:15635179-15644330	7	-	15635179	15635179	16724991	7	132,57,169,66,79,192,127,	0,831,1366,1620,2201,3672,9024,
#Partially deleted in new
chr22	15690025	15721522	chr22:15690025-15721522	3	+	15690077	15719777	789624	11	684,115,174,107,138,71,71,45,167,119,237,	0,5345,5619,8636,10052,12660,17994,19756,20842,29634,31260,
#Partially deleted in new
chr22	15690077	15721631	chr22:15690077-15721631	1	+	15690077	15719777	789624	12	237,284,115,174,107,138,71,71,45,167,119,346,	0,348,5293,5567,8584,10000,12608,17942,19704,20790,29582,31208,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	15690245	15721522	chr22:15690245-15721522	0	+	15690245	15697532	789624	12	464,115,174,256,107,138,71,71,45,167,119,237,	0,5125,5399,7128,8416,9832,12440,17774,19536,20622,29414,31040,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	15699360	15703403	chr22:15699360-15703403	3	-	15699360	15699360	789624	2	2122,444,	0,3599,
#Deleted in new
chr22	15701458	15701565	chr22:15701458-15701565	3	+	15701458	15701458	8553170	1	107,	0,
#Deleted in new
chr22	15721485	15722608	chr22:15721485-15722608	7	+	15721485	15721485	16724991	1	1123,	0,
#Partially deleted in new
chr22	15746629	15778297	chr22:15746629-15778297	1	+	15746629	15746629	789624	3	270,66,288,	0,7758,31380,
#Deleted in new
chr22	15749155	15750825	chr22:15749155-15750825	7	-	15749155	15749155	16724991	2	643,454,	0,1216,
#Partially deleted in new
chr22	15765686	15778297	chr22:15765686-15778297	3	+	15765686	15765686	8553170	3	94,137,288,	0,9025,12323,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	15784991	15829984	chr22:15784991-15829984	1	+	15784991	15784991	8553170	4	66,136,91,3843,	0,6025,30484,41150,
#Deleted in new
chr22	15796958	15798346	chr22:15796958-15798346	3	+	15796958	15796958	8553170	1	1388,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	15805262	15815897	chr22:15805262-15815897	5	-	15805262	15805262	16724991	3	749,88,323,	0,8131,10312,
#Partially deleted in new
chr22	15805811	15820884	chr22:15805811-15820884	7	-	15805811	15805811	16724991	3	200,88,264,	0,7582,14809,
#Partially deleted in new
chr22	15805846	15806503	chr22:15805846-15806503	5	-	15805846	15805846	16724991	2	165,148,	0,509,
#Deleted in new
chr22	15818492	15819134	chr22:15818492-15819134	0	+	15818492	15818492	8553170	1	642,	0,
#Deleted in new
chr22	15823196	15823890	chr22:15823196-15823890	3	+	15823196	15823196	8553170	1	694,	0,
#Deleted in new
chr22	15826565	15827187	chr22:15826565-15827187	7	+	15826565	15826565	16724991	1	622,	0,
#Partially deleted in new
chr22	15852989	15893942	chr22:15852989-15893942	7	+	15852989	15852989	16724991	5	232,122,199,134,806,	0,6060,23499,24325,40147,
#Deleted in new
chr22	15854194	15855243	chr22:15854194-15855243	7	-	15854194	15854194	16724991	1	1049,	0,
#Deleted in new
chr22	15901790	15901911	chr22:15901790-15901911	7	+	15901790	15901790	16724991	1	121,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	15914720	15915800	chr22:15914720-15915800	3	-	15914720	15914720	8553170	2	426,160,	0,920,
#Deleted in new
chr22	16141766	16141872	chr22:16141766-16141872	3	+	16141766	16141766	8553170	1	106,	0,
#Partially deleted in new
chr22	16387693	16390887	chr22:16387693-16390887	7	+	16387693	16387693	16724991	4	146,85,126,247,	0,2442,2676,2947,
#Deleted in new
chr22	16405329	16405417	chr22:16405329-16405417	7	+	16405329	16405329	16724991	1	88,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	16423942	16426031	chr22:16423942-16426031	7	+	16423942	16423942	16724991	4	166,688,244,514,	0,582,1302,1575,
#Partially deleted in new
chr22	16428946	16476870	chr22:16428946-16476870	7	-	16428946	16428946	16724991	9	215,136,91,151,79,175,127,142,172,	0,4379,5417,9340,10366,30983,43905,45141,47752,
#Deleted in new
chr22	16486984	16488322	chr22:16486984-16488322	7	+	16486984	16486984	16724991	1	1338,	0,
#Partially deleted in new
chr22	16503303	16509475	chr22:16503303-16509475	7	+	16503303	16503303	16724991	3	73,85,88,	0,4851,6084,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	16521058	16527237	chr22:16521058-16527237	3	+	16521058	16521058	8553170	3	231,167,263,	0,4888,5916,
#Deleted in new
chr22	16572026	16574637	chr22:16572026-16574637	7	+	16572026	16572026	16724991	5	124,46,169,106,172,	0,681,1017,1395,2439,
#Partially deleted in new
chr22	16575362	16582707	chr22:16575362-16582707	7	-	16575362	16575362	16724991	3	2711,477,201,	0,5448,7144,
#Deleted in new
chr22	16581076	16582602	chr22:16581076-16582602	4	-	16581076	16581076	16724991	2	211,96,	0,1430,
#Partially deleted in new
chr22	16590750	16592810	chr22:16590750-16592810	3	-	16590876	16592550	789624	1	2060,	0,
#Partially deleted in new
chr22	16595088	16595485	chr22:16595088-16595485	7	-	16595088	16595088	16724991	1	397,	0,
#Partially deleted in new
chr22	16601886	16698742	chr22:16601886-16698742	7	+	16601886	16601886	16724991	3	329,162,1247,	0,36692,95609,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	16601910	16648830	chr22:16601910-16648830	4	+	16601910	16601910	16724991	9	305,236,102,57,51,162,90,123,304,	0,9747,12166,20930,35129,36668,45257,45752,46616,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	16601910	16615111	chr22:16601910-16615111	3	+	16601910	16601910	8553170	3	305,236,1035,	0,9747,12166,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	16601947	16615111	chr22:16601947-16615111	1	+	16601947	16601947	8553170	4	268,236,102,413,	0,9710,12129,12751,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	16602043	16653809	chr22:16602043-16653809	4	+	16602043	16602043	16724991	5	172,57,51,162,5283,	0,20797,34996,36535,46483,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	16612581	16615104	chr22:16612581-16615104	1	+	16612581	16612581	8553170	1	2523,	0,
#Deleted in new
chr22	16616169	16617114	chr22:16616169-16617114	3	+	16616169	16616169	8553170	2	177,369,	0,576,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	16619614	16653692	chr22:16619614-16653692	4	+	16619614	16619614	16724991	8	106,109,57,51,162,181,122,183,	0,437,3226,17425,18964,27990,28912,33895,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	16637019	16638980	chr22:16637019-16638980	4	+	16637019	16637019	16724991	2	71,402,	0,1559,
#Partially deleted in new
chr22	16637039	16638740	chr22:16637039-16638740	5	+	16637039	16637039	16724991	2	51,162,	0,1539,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	16638578	16640737	chr22:16638578-16640737	4	+	16638578	16638578	16724991	2	162,1440,	0,719,
#Deleted in new
chr22	16645694	16646581	chr22:16645694-16646581	7	-	16645694	16645694	16724991	2	119,134,	0,753,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	16649929	16653805	chr22:16649929-16653805	4	+	16649929	16649929	16724991	3	32,162,873,	0,2392,3003,
#Partially deleted in new
chr22	16653891	16659628	chr22:16653891-16659628	7	-	16653891	16653891	16724991	2	185,132,	0,5605,
#Partially deleted in new
chr22	16669463	16675452	chr22:16669463-16675452	0	-	16669463	16669463	8553170	4	157,45,71,330,	0,753,2054,5659,
#Partially deleted in new
chr22	16671089	16679493	chr22:16671089-16679493	7	-	16671089	16671089	16724991	6	89,71,153,924,184,202,	0,428,2510,4033,6103,8202,
#Partially deleted in new
chr22	16676015	16694648	chr22:16676015-16694648	3	-	16676015	16676015	8553170	7	31,184,202,178,44,165,71,	0,1177,3276,14087,14557,15959,18562,
#Partially deleted in new
chr22	16690102	16704477	chr22:16690102-16704477	7	-	16690102	16690102	16724991	12	178,44,165,144,141,117,1379,136,159,161,114,169,	0,470,1872,4475,4901,5139,6675,10211,11051,11940,13890,14206,
#Deleted in new
chr22	16746868	16748645	chr22:16746868-16748645	3	-	16746868	16746868	789624	2	871,370,	0,1407,
#Partially deleted in new
chr22	16783411	16821699	chr22:16783411-16821699	3	-	16783618	16808073	789624	4	998,254,345,93,	0,16359,24327,38195,
#Deleted in new
chr22	16827473	16829335	chr22:16827473-16829335	7	+	16827473	16827473	16724991	2	587,794,	0,1068,
#Deleted in new
chr22	16827550	16829209	chr22:16827550-16829209	5	+	16827550	16827550	16724991	2	510,668,	0,991,
#Deleted in new
chr22	16837521	16837666	chr22:16837521-16837666	7	+	16837521	16837521	16724991	1	145,	0,
#Deleted in new
chr22	16844398	16846357	chr22:16844398-16846357	7	+	16844398	16844398	16724991	4	127,212,163,53,	0,466,1520,1906,
#Deleted in new
chr22	16855803	16856162	chr22:16855803-16856162	7	+	16855803	16855803	16724991	1	359,	0,
#Deleted in new
chr22	16857618	16860718	chr22:16857618-16860718	7	-	16857618	16857618	16724991	1	3100,	0,
#Partially deleted in new
chr22	16869477	16871126	chr22:16869477-16871126	3	+	16869477	16869477	8553170	2	149,351,	0,1298,
#Deleted in new
chr22	16876217	16876421	chr22:16876217-16876421	7	-	16876217	16876217	16724991	1	204,	0,
#Deleted in new
chr22	16876551	16876902	chr22:16876551-16876902	7	-	16876551	16876551	16724991	1	351,	0,
#Deleted in new
chr22	16897444	16897546	chr22:16897444-16897546	7	+	16897444	16897444	16724991	1	102,	0,
#Deleted in new
chr22	16904218	16904696	chr22:16904218-16904696	7	-	16904218	16904218	16724991	2	298,56,	0,422,
#Deleted in new
chr22	16914234	16914981	chr22:16914234-16914981	7	-	16914234	16914234	16724991	2	316,51,	0,696,
#Deleted in new
chr22	16921442	16922173	chr22:16921442-16922173	7	-	16921442	16921442	16724991	2	311,49,	0,682,
#Deleted in new
chr22	16925951	16926444	chr22:16925951-16926444	7	-	16925951	16925951	16724991	2	246,67,	0,426,
#Deleted in new
chr22	16933520	16934003	chr22:16933520-16934003	7	-	16933520	16933520	16724991	2	305,55,	0,428,
#Partially deleted in new
chr22	16953894	16956808	chr22:16953894-16956808	7	+	16953894	16953894	16724991	3	196,64,592,	0,1899,2322,
#Partially deleted in new
chr22	16961935	17008222	chr22:16961935-17008222	3	-	16962732	17008114	789624	10	941,105,97,91,265,86,251,208,304,282,	0,1789,2830,3242,4164,6362,8007,26024,29937,46005,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	16962459	17007999	chr22:16962459-17007999	0	-	16968328	17007999	789624	9	417,105,97,91,1382,86,157,304,59,	0,1265,2306,2718,3640,5838,25500,29413,45481,
#Partially deleted in new
chr22	16962732	17008114	chr22:16962732-17008114	1	-	16962732	17008114	789624	10	144,105,97,91,265,86,581,208,304,174,	0,992,2033,2445,3367,5565,6880,25227,29140,45208,
#Partially deleted in new
chr22	16966099	16968383	chr22:16966099-16968383	0	-	16966099	16966099	8553170	2	84,86,	0,2198,
#Partially deleted in new
chr22	16967300	17007999	chr22:16967300-17007999	0	-	16967300	16967300	8553170	4	145,86,304,59,	0,997,24572,40640,
#Deleted in new
chr22	17012403	17012932	chr22:17012403-17012932	7	+	17012403	17012403	16724991	1	529,	0,
#Partially deleted in new
chr22	17021397	17022570	chr22:17021397-17022570	7	-	17021397	17021397	16724991	2	645,222,	0,951,
#Partially deleted in new
chr22	17036569	17058792	chr22:17036569-17058792	5	+	17036569	17036569	16724991	4	775,128,103,1720,	0,8303,10754,20503,
#Partially deleted in new
chr22	17037211	17056558	chr22:17037211-17056558	4	+	17037211	17037211	16724991	4	133,128,103,182,	0,7661,10112,19165,
#Partially deleted in new
chr22	17037238	17060825	chr22:17037238-17060825	7	+	17037238	17037238	16724991	4	106,128,103,231,	0,7634,10085,23356,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	17037285	17060003	chr22:17037285-17060003	4	+	17037285	17037285	16724991	4	59,128,107,1989,	0,7587,10038,20729,
#Partially deleted in new
chr22	17044872	17047426	chr22:17044872-17047426	5	+	17044872	17044872	16724991	3	128,99,103,	0,1473,2451,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	17067820	17070675	chr22:17067820-17070675	3	+	17067820	17067820	8553170	1	2855,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	17080700	17081456	chr22:17080700-17081456	3	+	17080700	17080700	8553170	1	756,	0,
#Partially deleted in new
chr22	17084953	17100469	chr22:17084953-17100469	0	+	17084953	17084953	8553170	4	276,147,113,115,	0,12843,13821,15401,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	17084958	17115693	chr22:17084958-17115693	3	+	17085091	17109820	0	13	271,25,147,113,127,48,164,84,85,12,102,42,7387,	0,12103,12838,13816,15396,17037,17180,18535,19767,20632,20894,22768,23348,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	17084958	17115694	chr22:17084958-17115694	1	+	17085091	17109820	0	12	271,25,147,113,127,48,164,84,85,12,42,7388,	0,12103,12838,13816,15396,17037,17180,18535,19767,20632,22768,23348,
#Partially deleted in new
chr22	17085056	17097509	chr22:17085056-17097509	0	+	17085056	17085056	8553170	2	173,448,	0,12005,
#Deleted in new
chr22	17093611	17093939	chr22:17093611-17093939	7	-	17093611	17093611	16724991	1	328,	0,
#Deleted in new
chr22	17116298	17121367	chr22:17116298-17121367	1	-	17119390	17120062	789624	2	3845,116,	0,4953,
#Deleted in new
chr22	17116299	17121253	chr22:17116299-17121253	3	-	17119390	17121127	789624	1	4954,	0,
#Partially deleted in new
chr22	17121585	17130443	chr22:17121585-17130443	0	+	17121585	17121585	8553170	4	454,170,117,82,	0,983,3069,8776,
#Partially deleted in new
chr22	17121594	17132104	chr22:17121594-17132104	3	+	17121594	17121594	789624	4	445,117,123,490,	0,3060,8767,10020,
#Partially deleted in new
chr22	17137510	17165287	chr22:17137510-17165287	3	-	17138020	17165244	789624	8	847,189,175,34,94,113,204,79,	0,1039,3548,5587,7513,10937,12031,27698,
#Partially deleted in new
chr22	17137519	17159277	chr22:17137519-17159277	1	-	17138020	17159251	789624	8	838,189,175,34,94,113,204,152,	0,1030,3539,5578,7504,10928,12022,21606,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	17137521	17143647	chr22:17137521-17143647	0	-	17137521	17137521	8553170	3	836,189,2589,	0,1028,3537,
#Partially deleted in new
chr22	17137578	17159255	chr22:17137578-17159255	1	-	17138020	17159251	789624	4	779,175,34,130,	0,3480,5519,21547,
#Partially deleted in new
chr22	17137581	17141843	chr22:17137581-17141843	0	-	17137581	17137581	8553170	4	776,189,175,451,	0,968,3477,3811,
#Partially deleted in new
chr22	17148447	17158986	chr22:17148447-17158986	0	-	17148447	17148447	8553170	2	113,530,	0,10009,
#Partially deleted in new
chr22	17148448	17159168	chr22:17148448-17159168	0	-	17148448	17148448	8553170	3	112,204,712,	0,1093,10008,
#Partially deleted in new
chr22	17159383	17165439	chr22:17159383-17165439	0	+	17159383	17159383	789624	2	168,171,	0,5885,
#Partially deleted in new
chr22	17159398	17165445	chr22:17159398-17165445	3	+	17159398	17159398	789624	2	439,177,	0,5870,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	17178789	17219585	chr22:17178789-17219585	1	-	17181482	17207252	789624	9	2787,203,158,109,91,128,211,220,230,	0,3030,3814,9549,11152,12893,24773,28281,40566,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	17179302	17219434	chr22:17179302-17219434	1	-	17181482	17209677	0	10	2274,203,158,109,91,128,211,220,368,79,	0,2517,3301,9036,10639,12380,24260,27768,30053,40053,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	17179303	17221989	chr22:17179303-17221989	3	-	17181482	17209677	0	10	2273,203,158,109,91,128,211,220,330,263,	0,2516,3300,9035,10638,12379,24259,27767,30052,42423,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	17179305	17209889	chr22:17179305-17209889	1	-	17181482	17209677	0	9	2271,203,158,109,91,128,211,220,534,	0,2514,3298,9033,10636,12377,24257,27765,30050,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	17179305	17199783	chr22:17179305-17199783	1	-	17181482	17199578	0	7	2271,203,158,109,91,128,235,	0,2514,3298,9033,10636,12377,20243,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	17179316	17198789	chr22:17179316-17198789	0	-	17179316	17179316	8553170	7	2260,203,158,109,91,128,191,	0,2503,3287,9022,10625,12366,19282,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	17179321	17199596	chr22:17179321-17199596	0	-	17188395	17199578	8553170	6	2255,203,158,109,128,48,	0,2498,3282,9017,12361,20227,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	17180883	17219585	chr22:17180883-17219585	1	-	17181482	17209677	789624	10	693,203,158,109,91,128,211,220,368,230,	0,936,1720,7455,9058,10799,22679,26187,28472,38472,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	17180989	17221848	chr22:17180989-17221848	1	-	17181482	17209551	789624	10	587,203,158,109,91,128,211,220,243,122,	0,830,1614,7349,8952,10693,22573,26081,28366,40737,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	17181086	17219434	chr22:17181086-17219434	1	-	17181482	17209551	789624	10	490,203,158,109,91,128,211,220,243,79,	0,733,1517,7252,8855,10596,22476,25984,28269,38269,
#Partially deleted in new
chr22	17181382	17209504	chr22:17181382-17209504	0	-	17203867	17209504	8553170	9	194,203,158,109,1869,211,36,220,149,	0,437,1221,6956,8559,22180,22471,25688,27973,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	17182640	17188727	chr22:17182640-17188727	0	-	17182640	17182640	8553170	2	121,389,	0,5698,
#Partially deleted in new
chr22	17189783	17198791	chr22:17189783-17198791	0	-	17189783	17189783	8553170	3	249,128,193,	0,1899,8815,
#Partially deleted in new
chr22	17191594	17219434	chr22:17191594-17219434	0	-	17191594	17191594	8553170	5	216,211,220,243,79,	0,11968,15476,17761,27761,
#Deleted in new
chr22	17192935	17193308	chr22:17192935-17193308	7	+	17192935	17192935	16724991	1	373,	0,
#Deleted in new
chr22	17198856	17199595	chr22:17198856-17199595	0	-	17198856	17198856	8553170	2	423,47,	0,692,
#Partially deleted in new
chr22	17207156	17219435	chr22:17207156-17219435	0	-	17207156	17209677	789624	3	134,335,80,	0,2199,12199,
#Partially deleted in new
chr22	17207205	17221854	chr22:17207205-17221854	0	-	17207205	17209677	789624	3	85,368,128,	0,2150,14521,
#Partially deleted in new
chr22	17209605	17258235	chr22:17209605-17258235	0	-	17209605	17209677	8553170	2	118,68,	0,48562,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	17209605	17258235	chr22:17209605-17258235	0	-	17209605	17209677	8553170	4	118,375,611,72,	0,12121,46662,48558,
#Partially deleted in new
chr22	17213515	17214155	chr22:17213515-17214155	7	+	17213515	17213515	16724991	2	241,92,	0,548,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	17256858	17266733	chr22:17256858-17266733	3	-	17256858	17256858	789624	3	1448,256,211,	0,3931,9664,
#Partially deleted in new
chr22	17329033	17329232	chr22:17329033-17329232	3	+	17329033	17329033	8553170	1	199,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	17352880	17353177	chr22:17352880-17353177	3	-	17352880	17352880	8553170	1	297,	0,
#Partially deleted in new
chr22	17359948	17553332	chr22:17359948-17553332	3	+	17499493	17552840	789624	19	75,95,184,140,105,50,170,84,154,130,38,92,127,389,129,847,1414,112,498,	0,117639,137454,139461,140682,143133,144898,151864,164169,177154,178571,178691,179044,180463,181890,182208,188202,192082,192886,
#Partially deleted in new
chr22	17369887	17553332	chr22:17369887-17553332	1	+	17499493	17552840	789624	19	22,95,184,140,105,50,170,84,154,130,38,92,127,389,129,847,1417,112,498,	0,107700,127515,129522,130743,133194,134959,141925,154230,167215,168632,168752,169105,170524,171951,172269,178260,182143,182947,
#Deleted in new
chr22	17418696	17419828	chr22:17418696-17419828	7	+	17418696	17418696	16724991	1	1132,	0,
#Deleted in new
chr22	17424387	17424775	chr22:17424387-17424775	7	-	17424387	17424387	16724991	1	388,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	17428272	17499458	chr22:17428272-17499458	0	+	17428272	17428272	8553170	4	268,95,184,49,	0,49315,69130,71137,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr22	17477092	17558149	chr22:17477092-17558149	1	+	17477099	17552840	789624	19	67,95,184,140,105,50,170,84,154,130,38,92,127,389,129,847,1417,112,5315,	0,495,20310,22317,23538,25989,27754,34720,47025,60010,61427,61547,61900,63319,64746,65064,71055,74938,75742,
#Deleted in new
chr22	17518675	17519029	chr22:17518675-17519029	7	-	17518675	17518675	16724991	1	354,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	17548998	17554133	chr22:17548998-17554133	0	+	17548998	17550333	789624	4	566,167,112,1299,	0,1244,3032,3836,
#Partially deleted in new
chr22	17563438	17590994	chr22:17563438-17590994	3	+	17579944	17590236	789624	11	275,63,220,123,56,91,119,166,155,76,900,	0,6485,16306,17598,17919,19124,19977,23697,24486,26151,26656,
#Partially deleted in new
chr22	17563449	17590881	chr22:17563449-17590881	1	+	17579944	17590236	789624	10	264,220,123,56,91,119,166,155,76,787,	0,16295,17587,17908,19113,19966,23686,24475,26140,26645,
#Partially deleted in new
chr22	17563463	17570256	chr22:17563463-17570256	0	+	17563463	17563463	8553170	2	250,333,	0,6460,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	17563588	17582208	chr22:17563588-17582208	0	+	17563588	17563588	8553170	4	125,63,1415,851,	0,6335,16156,17769,
#Partially deleted in new
chr22	17569700	17583484	chr22:17569700-17583484	0	+	17569700	17569700	8553170	6	286,220,123,56,91,69,	0,10044,11336,11657,12862,13715,
#Partially deleted in new
chr22	17569706	17570393	chr22:17569706-17570393	0	+	17569706	17569706	8553170	2	90,470,	0,217,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	17580156	17589192	chr22:17580156-17589192	3	-	17580156	17580156	8553170	4	175,215,122,1326,	0,1177,2094,7710,
#Partially deleted in new
chr22	17592135	17628818	chr22:17592135-17628818	3	-	17592673	17628635	789624	9	601,88,95,69,90,67,110,66,216,	0,2393,6058,7891,8956,20676,21075,27325,36467,
#Partially deleted in new
chr22	17592168	17628747	chr22:17592168-17628747	1	-	17592673	17628635	789624	8	568,88,95,69,67,110,66,145,	0,2360,6025,7858,20643,21042,27292,36434,
#Partially deleted in new
chr22	17592408	17628749	chr22:17592408-17628749	1	-	17592673	17628635	789624	8	328,88,95,69,90,67,110,147,	0,2120,5785,7618,8683,20403,20802,36194,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	17592668	17595292	chr22:17592668-17595292	0	-	17592668	17592668	8553170	2	68,764,	0,1860,
#Partially deleted in new
chr22	17598000	17619528	chr22:17598000-17619528	0	-	17598000	17598000	8553170	6	288,69,90,67,110,68,	0,2026,3091,14811,15210,21460,
#Partially deleted in new
chr22	17600679	17619528	chr22:17600679-17619528	0	-	17600679	17600679	8553170	4	502,67,110,68,	0,12132,12531,18781,
#Partially deleted in new
chr22	17612613	17628748	chr22:17612613-17628748	0	-	17612613	17612613	8553170	4	265,110,66,146,	0,597,6847,15989,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	17612975	17628749	chr22:17612975-17628749	0	-	17612975	17612975	8553170	3	345,66,147,	0,6485,15627,
#Partially deleted in new
chr22	17628854	17696209	chr22:17628854-17696209	0	+	17628854	17628854	8553170	5	52,599,171,108,69,	0,9247,26807,54359,67286,
#Partially deleted in new
chr22	17628915	17702428	chr22:17628915-17702428	1	+	17655711	17702392	0	7	90,599,171,108,157,70,186,	0,9186,26746,54298,60070,67225,73327,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	17638583	17730855	chr22:17638583-17730855	1	+	17655711	17726690	789624	5	303,171,108,144,4179,	0,17078,44630,63659,88093,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	17638583	17730855	chr22:17638583-17730855	1	+	17702272	17727534	0	6	303,171,108,157,144,4179,	0,17078,44630,50402,63659,88093,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	17638583	17730855	chr22:17638583-17730855	1	+	17655711	17726690	789624	4	303,171,144,4179,	0,17078,63659,88093,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	17638583	17730855	chr22:17638583-17730855	1	+	17702272	17727534	0	6	303,171,108,70,144,4179,	0,17078,44630,57557,63659,88093,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	17638583	17730855	chr22:17638583-17730855	1	+	17638693	17727534	789624	5	303,108,157,70,4179,	0,44630,50402,57557,88093,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	17638583	17730855	chr22:17638583-17730855	1	+	17655711	17726690	789624	4	303,171,108,4179,	0,17078,44630,88093,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	17638583	17730855	chr22:17638583-17730855	1	+	17638693	17727534	789624	6	303,108,157,70,144,4179,	0,44630,50402,57557,63659,88093,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	17638589	17728721	chr22:17638589-17728721	3	+	17655711	17727534	0	7	297,171,108,157,70,144,2045,	0,17072,44624,50396,57551,63653,88087,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	17638740	17728699	chr22:17638740-17728699	0	+	17655711	17696148	789624	6	146,171,108,70,144,2023,	0,16921,44473,57400,63502,87936,
#Partially deleted in new
chr22	17638756	17692395	chr22:17638756-17692395	0	+	17638756	17638756	8553170	4	130,108,157,40,	0,44457,50229,53599,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	17638771	17703733	chr22:17638771-17703733	1	+	17655711	17702392	0	6	115,171,108,157,70,1491,	0,16890,44442,50214,57369,63471,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	17638810	17730622	chr22:17638810-17730622	1	+	17655711	17726806	789624	5	76,171,108,157,3946,	0,16851,44403,50175,87866,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	17689073	17729140	chr22:17689073-17729140	0	+	17689073	17702288	789624	3	69,144,2464,	0,13169,37603,
#Partially deleted in new
chr22	17695737	17702363	chr22:17695737-17702363	0	+	17695737	17695737	8553170	2	473,121,	0,6505,
#Partially deleted in new
chr22	17706709	17727670	chr22:17706709-17727670	0	+	17706709	17706709	8553170	2	116,994,	0,19967,
#Partially deleted in new
chr22	17734137	17774016	chr22:17734137-17774016	3	-	17735579	17773689	0	6	1454,213,140,211,70,407,	0,3879,5211,9665,15967,39472,
#Partially deleted in new
chr22	17734141	17774495	chr22:17734141-17774495	1	-	17735579	17739423	0	5	1450,213,140,211,115,	0,3875,5207,9661,40239,
#Partially deleted in new
chr22	17734141	17774495	chr22:17734141-17774495	1	-	17735579	17739423	0	5	1450,213,140,70,115,	0,3875,5207,15963,40239,
#Partially deleted in new
chr22	17734141	17774042	chr22:17734141-17774042	1	-	17735579	17739423	0	4	1450,213,140,433,	0,3875,5207,39468,
#Partially deleted in new
chr22	17734141	17774495	chr22:17734141-17774495	1	-	17735579	17750116	0	6	1450,213,140,211,70,115,	0,3875,5207,9661,15963,40239,
#Partially deleted in new
chr22	17734170	17774492	chr22:17734170-17774492	1	-	17735579	17750116	0	6	1421,213,140,211,70,112,	0,3846,5178,9632,15934,40210,
#Partially deleted in new
chr22	17734174	17774489	chr22:17734174-17774489	1	-	17735579	17739423	0	4	1417,213,140,109,	0,3842,5174,40206,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	17735221	17741194	chr22:17735221-17741194	0	-	17735221	17735221	8553170	3	370,213,1846,	0,2795,4127,
#Partially deleted in new
chr22	17735498	17774412	chr22:17735498-17774412	1	-	17739392	17750116	0	7	93,213,140,95,211,70,32,	0,2518,3850,4583,8304,14606,38882,
#Partially deleted in new
chr22	17735551	17774412	chr22:17735551-17774412	0	-	17735551	17735551	8553170	6	40,213,828,211,70,32,	0,2465,3797,8251,14553,38829,
#Partially deleted in new
chr22	17735551	17774665	chr22:17735551-17774665	1	-	17735579	17750116	0	6	40,213,140,211,70,26,	0,2465,3797,8251,14553,39088,
#Partially deleted in new
chr22	17735551	17774665	chr22:17735551-17774665	1	-	17735579	17739423	0	4	40,213,140,26,	0,2465,3797,39088,
#Partially deleted in new
chr22	17738057	17774495	chr22:17738057-17774495	0	-	17738057	17738057	8553170	4	172,140,211,115,	0,1291,5745,36323,
#Partially deleted in new
chr22	17739447	17774770	chr22:17739447-17774770	0	-	17739447	17739447	8553170	3	41,211,78,	0,4355,35245,
#Partially deleted in new
chr22	17740030	17774495	chr22:17740030-17774495	1	-	17740030	17750116	789624	4	146,211,70,115,	0,3772,10074,34350,
#Partially deleted in new
chr22	17764179	17764259	chr22:17764179-17764259	3	-	17764179	17764179	5263520	1	80,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	17777321	17779481	chr22:17777321-17779481	3	+	17777321	17777321	789624	1	2160,	0,
#Partially deleted in new
chr22	17787648	18024559	chr22:17787648-18024559	3	-	17790731	17906812	0	32	3268,74,100,94,111,95,1819,83,141,114,138,254,196,88,89,187,174,63,113,197,148,97,127,116,258,101,156,102,117,208,338,279,	0,3349,3553,21195,23054,29041,29662,33778,34381,35298,39995,44205,54173,77250,78275,84188,98229,99521,99674,101385,103836,106159,107635,108597,109075,111799,113193,114229,114982,116983,118900,236632,
#Partially deleted in new
chr22	17787651	17811497	chr22:17787651-17811497	3	-	17787651	17787651	8553170	5	3265,74,100,94,795,	0,3346,3550,21192,23051,
#Deleted in new
chr22	17790539	17791667	chr22:17790539-17791667	0	-	17790539	17790539	8553170	3	377,74,466,	0,458,662,
#Partially deleted in new
chr22	17790836	17815669	chr22:17790836-17815669	0	-	17790836	17790836	8553170	6	80,74,100,94,111,3163,	0,161,365,18007,19866,21670,
#Partially deleted in new
chr22	17790945	17817489	chr22:17790945-17817489	0	-	17790945	17817489	789624	8	126,100,51,94,111,51,95,179,	0,256,12865,17898,19757,21561,25744,26365,
#Partially deleted in new
chr22	17791263	17817425	chr22:17791263-17817425	0	-	17791263	17817425	789624	6	38,66,94,111,95,115,	0,2465,17580,19439,25426,26047,
#Partially deleted in new
chr22	17803553	17810736	chr22:17803553-17810736	0	-	17803571	17810736	789624	3	308,94,34,	0,5290,7149,
#Partially deleted in new
chr22	17819021	17832000	chr22:17819021-17832000	0	-	17819021	17832000	789624	5	108,83,141,114,147,	0,2405,3008,3925,12832,
#Partially deleted in new
chr22	17819035	17831927	chr22:17819035-17831927	0	-	17819035	17831927	789624	6	94,83,141,114,63,74,	0,2391,2994,3911,7418,12818,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr22	17834327	17906835	chr22:17834327-17906835	1	-	17834449	17906812	0	20	222,196,88,89,187,174,63,113,197,148,97,127,116,258,101,156,102,117,208,287,	0,7494,30571,31596,37509,51550,52842,52995,54706,57157,59480,60956,61918,62396,65120,66514,67550,68303,70304,72221,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr22	17839591	18001501	chr22:17839591-18001501	0	-	17896820	17906812	789624	19	2426,88,89,187,174,63,113,197,148,97,127,116,258,156,102,117,208,338,109,	0,25307,26332,32245,46286,47578,47731,49442,51893,54216,55692,56654,57132,61250,62286,63039,65040,66957,161801,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr22	17839950	17906812	chr22:17839950-17906812	1	-	17841775	17906812	0	20	2067,88,89,187,84,174,63,113,197,148,97,127,116,258,101,156,102,117,208,264,	0,24948,25973,31886,44324,45927,47219,47372,49083,51534,53857,55333,56295,56773,59497,60891,61927,62680,64681,66598,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	17839950	17842482	chr22:17839950-17842482	0	-	17839950	17839950	8553170	1	2532,	0,
#Partially deleted in new
chr22	17841674	17906827	chr22:17841674-17906827	1	-	17841775	17906812	0	19	343,88,89,187,174,63,113,197,148,97,127,116,258,101,156,102,117,208,279,	0,23224,24249,30162,44203,45495,45648,47359,49810,52133,53609,54571,55049,57773,59167,60203,60956,62957,64874,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr22	17860162	17895288	chr22:17860162-17895288	0	-	17864653	17895288	789624	11	4824,89,187,84,174,63,113,197,148,97,5,	0,5761,11674,24112,25715,27007,27160,28871,31322,33645,35121,
#Partially deleted in new
chr22	17864614	17906874	chr22:17864614-17906874	1	-	17864653	17906812	0	22	372,89,187,108,108,57,99,174,63,113,197,148,97,127,116,258,101,156,102,117,208,326,	0,1309,7222,8132,10832,14731,16590,21263,22555,22708,24419,26870,29193,30669,31631,32109,34833,36227,37263,38016,40017,41934,
#Deleted in new
chr22	17865923	17876703	chr22:17865923-17876703	0	-	17865923	17865923	8553170	3	89,187,296,	0,5913,10484,
#Deleted in new
chr22	17871929	17876872	chr22:17871929-17876872	0	-	17871929	17871929	8553170	2	94,465,	0,4478,
#Deleted in new
chr22	17871933	17876739	chr22:17871933-17876739	0	-	17871933	17871933	8553170	3	90,116,332,	0,3277,4474,
#Partially deleted in new
chr22	17904727	18001180	chr22:17904727-18001180	0	-	17904727	17906812	789624	3	112,338,92,	0,1821,96361,
#Partially deleted in new
chr22	17980867	17980961	chr22:17980867-17980961	3	-	17980867	17980867	5263520	1	94,	0,
#Deleted in new
chr22	17983204	17983619	chr22:17983204-17983619	3	-	17983204	17983204	8553170	2	83,278,	0,137,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	18004269	18007308	chr22:18004269-18007308	3	-	18004269	18004269	8553170	2	2346,147,	0,2892,
#Partially deleted in new
chr22	18019213	18020200	chr22:18019213-18020200	7	+	18019213	18019213	16724991	3	198,66,87,	0,522,900,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	18029384	18037968	chr22:18029384-18037968	3	+	18029384	18029384	5263520	2	170,2209,	0,6375,
#Deleted in new
chr22	18076526	18077797	chr22:18076526-18077797	1	-	18076526	18076526	8553170	2	536,269,	0,1002,
#Deleted in new
chr22	18077185	18078884	chr22:18077185-18078884	3	-	18077185	18077185	8553170	1	1699,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	18077919	18091019	chr22:18077919-18091019	1	+	18078376	18088075	789624	5	128,311,141,296,3048,	0,376,1954,5517,10052,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	18077922	18105396	chr22:18077922-18105396	3	+	18078376	18088075	789624	6	125,311,141,296,147,17425,	0,373,1951,5514,7189,10049,
#Partially deleted in new
chr22	18078007	18088460	chr22:18078007-18088460	1	+	18078376	18088075	789624	5	599,141,296,147,489,	0,1866,5429,7104,9964,
#Partially deleted in new
chr22	18078014	18131138	chr22:18078014-18131138	0	+	18078376	18121677	789624	6	592,141,223,149,681,296,	0,1859,43464,46141,48339,52828,
#Deleted in new
chr22	18078054	18078775	chr22:18078054-18078775	0	-	18078054	18078054	8553170	1	721,	0,
#Partially deleted in new
chr22	18078376	18088119	chr22:18078376-18088119	1	+	18078376	18088075	789624	4	230,141,296,148,	0,1497,5060,9595,
#Partially deleted in new
chr22	18081465	18081675	chr22:18081465-18081675	7	-	18081465	18081465	16724991	1	210,	0,
#Deleted in new
chr22	18101611	18101888	chr22:18101611-18101888	7	+	18101611	18101611	16724991	1	277,	0,
#Partially deleted in new
chr22	18102456	18103649	chr22:18102456-18103649	7	-	18102456	18102456	16724991	2	338,193,	0,1000,
#Partially deleted in new
chr22	18110330	18124268	chr22:18110330-18124268	0	+	18121673	18124268	789624	3	246,223,113,	0,11148,13825,
#Partially deleted in new
chr22	18110686	18131154	chr22:18110686-18131154	1	+	18121673	18131136	789624	5	153,223,149,681,312,	0,10792,13469,15667,20156,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	18110758	18131154	chr22:18110758-18131154	3	-	18110758	18110758	8553170	1	20396,	0,
#Partially deleted in new
chr22	18110792	18131731	chr22:18110792-18131731	3	+	18110865	18131136	789624	5	76,223,149,681,889,	0,10686,13363,15561,20050,
#Partially deleted in new
chr22	18121106	18131117	chr22:18121106-18131117	0	+	18121403	18131117	789624	4	595,149,681,275,	0,3049,5247,9736,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	18126706	18146554	chr22:18126706-18146554	0	+	18126706	18145989	789624	3	328,164,899,	0,4136,18949,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr22	18149898	18177397	chr22:18149898-18177397	3	+	18157663	18176817	789624	11	324,263,97,146,80,147,96,168,132,50,626,	0,7659,10273,11891,17356,17991,19945,20854,23251,23894,26873,
#Partially deleted in new
chr22	18178037	18205915	chr22:18178037-18205915	3	-	18178037	18178037	789624	9	428,957,34,62,66,87,25,59,141,	0,5072,10585,11084,13145,18119,21152,21645,27737,
#Partially deleted in new
chr22	18340144	18345899	chr22:18340144-18345899	7	+	18340144	18340144	16724991	7	172,137,188,127,113,114,147,	0,695,4347,4767,4996,5190,5608,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	18361822	18386597	chr22:18361822-18386597	3	-	18361822	18361822	8553170	12	435,155,41,73,2323,34,62,66,87,25,59,212,	0,5078,5695,5962,6568,11100,11599,13661,18633,21664,22157,24563,
#Partially deleted in new
chr22	18361829	18386526	chr22:18361829-18386526	1	-	18361829	18361829	789624	9	428,957,34,62,66,87,25,59,141,	0,5071,11093,11592,13654,18626,21657,22150,24556,
#Partially deleted in new
chr22	18370584	18386480	chr22:18370584-18386480	0	-	18370584	18370584	8553170	8	129,34,62,66,87,25,59,95,	0,2338,2837,4899,9871,12902,13395,15801,
#Partially deleted in new
chr22	18370665	18391105	chr22:18370665-18391105	0	-	18370665	18370665	8553170	9	48,34,62,66,87,25,59,59,287,	0,2257,2756,4818,9790,12821,13314,19243,20153,
#Partially deleted in new
chr22	18374105	18375689	chr22:18374105-18375689	3	+	18374105	18374105	8553170	2	116,259,	0,1325,
#Deleted in new
chr22	18400406	18404206	chr22:18400406-18404206	7	-	18400406	18400406	16724991	1	3800,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	18422243	18500594	chr22:18422243-18500594	3	+	18422243	18422243	789624	12	104,59,25,87,66,62,34,2041,73,41,155,439,	0,2733,3260,6231,64895,66961,67488,69742,72316,72615,73118,77912,
#Partially deleted in new
chr22	18424976	18490146	chr22:18424976-18490146	1	+	18424976	18424976	8553170	6	59,25,87,66,62,415,	0,527,3498,62162,64228,64755,
#Partially deleted in new
chr22	18486998	18488582	chr22:18486998-18488582	1	-	18486998	18486998	8553170	2	259,116,	0,1468,
#Partially deleted in new
chr22	18487125	18489905	chr22:18487125-18489905	0	+	18487125	18487125	8553170	3	79,62,174,	0,2079,2606,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	18487868	18491247	chr22:18487868-18491247	3	-	18487868	18487868	8553170	2	715,105,	0,3274,
#Partially deleted in new
chr22	18501793	18512187	chr22:18501793-18512187	3	-	18501793	18501793	8553170	2	56,302,	0,10092,
#Deleted in new
chr22	18516343	18518161	chr22:18516343-18518161	3	-	18516500	18517897	789624	6	304,114,113,128,210,99,	0,608,803,1018,1378,1719,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	18524619	18524935	chr22:18524619-18524935	3	+	18524619	18524619	8553170	1	316,	0,
#Deleted in new
chr22	18527156	18527626	chr22:18527156-18527626	7	+	18527156	18527156	16724991	1	470,	0,
#Deleted in new
chr22	18527801	18530459	chr22:18527801-18530459	3	+	18527980	18530459	789624	9	475,124,51,75,57,119,73,41,205,	0,757,1015,1217,1639,1804,2134,2354,2453,
#Deleted in new
chr22	18527801	18530571	chr22:18527801-18530571	0	+	18527801	18527801	8553170	5	475,535,57,403,416,	0,757,1639,1804,2354,
#Deleted in new
chr22	18528946	18530222	chr22:18528946-18530222	0	+	18528946	18528946	8553170	5	147,57,119,73,67,	0,494,659,989,1209,
#Deleted in new
chr22	18529041	18530178	chr22:18529041-18530178	0	+	18529041	18530178	789624	6	52,57,84,65,73,23,	0,399,564,750,894,1114,
#Deleted in new
chr22	18529065	18530204	chr22:18529065-18530204	0	+	18529065	18529065	8553170	4	28,57,119,269,	0,375,540,870,
#Deleted in new
chr22	18529408	18530573	chr22:18529408-18530573	0	+	18529408	18529408	8553170	4	89,119,261,319,	0,197,527,846,
#Deleted in new
chr22	18529809	18530459	chr22:18529809-18530459	1	+	18529809	18530459	789624	4	47,73,41,205,	0,126,346,445,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	18533645	18537791	chr22:18533645-18537791	5	-	18533645	18533645	16724991	3	408,84,1933,	0,1599,2213,
#Partially deleted in new
chr22	18533656	18548353	chr22:18533656-18548353	4	-	18533656	18533656	16724991	14	397,84,90,763,126,105,110,71,73,71,130,176,108,36,	0,1588,2202,2993,4776,4983,5571,6745,6916,10010,10995,13589,14354,14661,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	18533656	18537865	chr22:18533656-18537865	4	-	18533656	18533656	16724991	4	397,84,90,1216,	0,1588,2202,2993,
#Partially deleted in new
chr22	18533670	18548828	chr22:18533670-18548828	4	-	18533670	18533670	16724991	15	383,84,90,763,126,105,110,71,73,71,130,128,108,152,159,	0,1574,2188,2979,4762,4969,5557,6731,6902,9996,10981,13575,14340,14647,14999,
#Partially deleted in new
chr22	18534004	18548798	chr22:18534004-18548798	5	-	18534004	18534004	16724991	16	49,84,90,159,118,126,105,110,71,73,71,130,128,108,152,129,	0,1240,1854,2645,3290,4428,4635,5223,6397,6568,9662,10647,13241,14006,14313,14665,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	18538022	18574700	chr22:18538022-18574700	4	-	18538022	18538022	16724991	13	536,105,110,71,73,71,130,128,108,152,158,101,126,	0,617,1205,2379,2550,5644,6629,9223,9988,10295,10647,14450,36552,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	18538055	18577968	chr22:18538055-18577968	7	-	18538055	18538055	16724991	13	503,105,110,71,73,71,130,128,108,152,158,101,196,	0,584,1172,2346,2517,5611,6596,9190,9955,10262,10614,14417,39717,
#Deleted in new
chr22	18548010	18548770	chr22:18548010-18548770	4	-	18548010	18548010	16724991	2	459,101,	0,659,
#Deleted in new
chr22	18605354	18605497	chr22:18605354-18605497	3	+	18605354	18605354	8553170	1	143,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	18605801	18606102	chr22:18605801-18606102	3	-	18605801	18605801	8553170	1	301,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	18605814	18611919	chr22:18605814-18611919	3	-	18606514	18611434	0	1	6105,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	18615580	18615900	chr22:18615580-18615900	3	+	18615580	18615580	8553170	1	320,	0,
#Deleted in new
chr22	18623338	18625289	chr22:18623338-18625289	7	-	18623338	18623338	16724991	4	173,164,145,276,	0,637,1289,1675,
#Deleted in new
chr22	18636444	18638405	chr22:18636444-18638405	7	-	18636444	18636444	16724991	5	361,69,65,171,168,	0,467,879,1047,1793,
#Deleted in new
chr22	18650022	18653617	chr22:18650022-18653617	7	-	18650022	18650022	16724991	1	3595,	0,
#Deleted in new
chr22	18715814	18719341	chr22:18715814-18719341	7	+	18715814	18715814	16724991	1	3527,	0,
#Partially deleted in new
chr22	18733913	18757894	chr22:18733913-18757894	3	+	18733913	18733913	789624	9	141,59,25,87,66,62,34,957,428,	0,2118,2645,5616,10596,12660,13187,17955,23553,
#Deleted in new
chr22	18756347	18757906	chr22:18756347-18757906	1	+	18756347	18756347	8553170	1	1559,	0,
#Partially deleted in new
chr22	18773664	18805479	chr22:18773664-18805479	5	-	18773664	18773664	16724991	15	304,114,113,127,210,137,150,158,193,168,77,87,72,379,51,	0,608,803,1018,1377,5065,5725,7924,8474,17394,18108,18303,18597,20748,31764,
#Partially deleted in new
chr22	18773824	18791223	chr22:18773824-18791223	5	-	18773824	18773824	16724991	12	144,114,113,76,191,137,150,158,193,87,136,165,	0,448,643,858,1217,4905,5565,7764,8314,13706,13920,17234,
#Deleted in new
chr22	18794413	18794804	chr22:18794413-18794804	7	-	18794413	18794413	16724991	1	391,	0,
#Partially deleted in new
chr22	18794530	18843399	chr22:18794530-18843399	7	-	18794530	18794530	16724991	2	261,107,	0,48762,
#Partially deleted in new
chr22	18794597	18825001	chr22:18794597-18825001	4	-	18794597	18794597	16724991	2	194,74,	0,30330,
#Deleted in new
chr22	18833693	18834438	chr22:18833693-18834438	7	+	18833693	18833693	16724991	1	745,	0,
#Partially deleted in new
chr22	18846810	18856684	chr22:18846810-18856684	5	+	18846810	18846810	16724991	5	1516,207,106,129,110,	0,4826,6839,8979,9764,
#Partially deleted in new
chr22	18846931	18848320	chr22:18846931-18848320	5	+	18846931	18846931	16724991	1	1389,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	18850117	18861049	chr22:18850117-18861049	7	+	18850117	18850117	16724991	6	1726,376,106,129,915,2668,	0,2101,3532,5672,6457,8264,
#Partially deleted in new
chr22	18852875	18854933	chr22:18852875-18854933	4	+	18852875	18852875	16724991	3	67,106,186,	0,774,1872,
#Partially deleted in new
chr22	18855620	18858640	chr22:18855620-18858640	7	-	18855620	18855620	16724991	4	163,106,135,140,	0,639,1690,2880,
#Partially deleted in new
chr22	18873542	18894407	chr22:18873542-18894407	3	-	18873542	18873542	8553170	8	123,34,62,66,87,25,59,79,	0,2336,2835,4896,9870,12903,13396,20786,
#Deleted in new
chr22	18883501	18884682	chr22:18883501-18884682	3	-	18883501	18883501	8553170	1	1181,	0,
#Deleted in new
chr22	18906027	18912088	chr22:18906027-18912088	1	+	18910923	18911689	789624	5	87,161,101,141,549,	0,537,4144,4860,5512,
#Deleted in new
chr22	18906222	18912088	chr22:18906222-18912088	3	+	18906374	18911689	789624	5	262,161,101,141,549,	0,342,3949,4665,5317,
#Deleted in new
chr22	18906324	18914238	chr22:18906324-18914238	0	+	18906374	18910232	789624	5	143,161,101,141,2699,	0,240,3847,4563,5215,
#Deleted in new
chr22	18906350	18912082	chr22:18906350-18912082	0	+	18906374	18910270	789624	6	134,161,119,101,141,543,	0,214,3629,3821,4537,5189,
#Deleted in new
chr22	18906352	18908269	chr22:18906352-18908269	1	+	18906374	18906889	789624	2	132,1705,	0,212,
#Deleted in new
chr22	18906354	18912087	chr22:18906354-18912087	0	+	18906374	18906889	789624	5	130,522,94,141,548,	0,210,3824,4533,5185,
#Deleted in new
chr22	18906780	18910389	chr22:18906780-18910389	0	+	18906780	18906780	8553170	2	306,218,	0,3391,
#Deleted in new
chr22	18908662	18912078	chr22:18908662-18912078	0	+	18908662	18908662	8553170	4	31,101,141,539,	0,1509,2225,2877,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr22	18912776	18936553	chr22:18912776-18936553	3	-	18913174	18936287	789624	15	586,89,99,176,147,93,82,80,117,65,150,35,209,313,164,	0,661,4113,5539,6674,6929,8565,9548,10040,10338,12274,12911,18213,23238,23613,
#Partially deleted in new
chr22	18912780	18936296	chr22:18912780-18936296	1	-	18913174	18931147	789624	14	582,89,99,176,147,93,82,80,117,65,150,35,192,127,	0,657,4109,5535,6670,6925,8561,9544,10036,10334,12270,12907,18209,23389,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	18912780	18936295	chr22:18912780-18936295	0	-	18912780	18912780	8553170	13	582,89,99,176,147,93,1063,117,65,150,35,209,281,	0,657,4109,5535,6670,6925,8561,10036,10334,12270,12907,18209,23234,
#Partially deleted in new
chr22	18912781	18921574	chr22:18912781-18921574	0	-	18912781	18912781	8553170	6	581,89,99,176,147,1869,	0,656,4108,5534,6669,6924,
#Partially deleted in new
chr22	18912781	18936451	chr22:18912781-18936451	1	-	18913174	18931147	789624	14	581,89,99,176,147,93,82,80,117,65,150,35,209,62,	0,656,4108,5534,6669,6924,8560,9543,10035,10333,12269,12906,18208,23608,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr22	18912781	18936553	chr22:18912781-18936553	1	-	18913174	18936287	789624	14	581,89,99,176,147,93,82,80,117,65,150,35,209,539,	0,656,4108,5534,6669,6924,8560,9543,10035,10333,12269,12906,18208,23233,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	18912781	18924002	chr22:18912781-18924002	0	-	18912781	18912781	8553170	9	581,89,99,176,181,93,82,80,1186,	0,656,4108,5534,6669,6924,8560,9543,10035,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr22	18912781	18936142	chr22:18912781-18936142	0	-	18912781	18912781	8553170	11	581,89,99,176,147,2699,363,150,35,209,128,	0,656,4108,5534,6669,6924,10035,12269,12906,18208,23233,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	18914529	18921554	chr22:18914529-18921554	0	-	18914529	18914529	8553170	3	2459,176,2104,	0,3786,4921,
#Deleted in new
chr22	18919555	18921539	chr22:18919555-18921539	0	-	18919555	18919555	8553170	2	243,198,	0,1786,
#Partially deleted in new
chr22	18921380	18936142	chr22:18921380-18936142	0	-	18921380	18936142	789624	6	43,80,117,150,35,128,	0,944,1436,3670,4307,14634,
#Deleted in new
chr22	18922245	18923310	chr22:18922245-18923310	0	-	18922245	18922245	8553170	3	159,117,196,	0,571,869,
#Partially deleted in new
chr22	18922371	18934828	chr22:18922371-18934828	0	-	18922371	18930994	789624	7	33,117,65,150,35,127,67,	0,445,743,2679,3316,8618,12390,
#Partially deleted in new
chr22	18922879	18936266	chr22:18922879-18936266	0	-	18922879	18936266	789624	4	54,150,35,252,	0,2171,2808,13135,
#Partially deleted in new
chr22	18924724	18931110	chr22:18924724-18931110	0	-	18924724	18924724	8553170	3	476,35,121,	0,963,6265,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	18951933	18959512	chr22:18951933-18959512	3	-	18951933	18951933	8553170	1	7579,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	18970513	18994628	chr22:18970513-18994628	7	+	18970513	18970513	16724991	5	145,144,105,49,5049,	0,17243,17577,18903,19066,
#Partially deleted in new
chr22	18970524	19031242	chr22:18970524-19031242	0	+	18970524	18970524	789624	6	134,144,205,201,154,461,	0,17232,20195,21292,43828,60257,
#Partially deleted in new
chr22	18970582	18990883	chr22:18970582-18990883	4	+	18970582	18970582	16724991	4	76,184,144,164,	0,15253,17174,20137,
#Partially deleted in new
chr22	18980694	18981325	chr22:18980694-18981325	7	-	18980694	18980694	16724991	2	86,90,	0,541,
#Partially deleted in new
chr22	18985835	18994501	chr22:18985835-18994501	5	+	18985835	18985835	16724991	5	184,144,205,201,128,	0,1921,4884,5981,8538,
#Partially deleted in new
chr22	18989918	19020248	chr22:18989918-19020248	1	+	18989918	18989918	8553170	7	46,205,201,59,107,154,2952,	0,801,1898,12948,15917,24434,27378,
#Deleted in new
chr22	18997137	18997595	chr22:18997137-18997595	7	-	18997137	18997137	16724991	1	458,	0,
#Partially deleted in new
chr22	18998273	19014786	chr22:18998273-19014786	2	+	18998273	18998273	8553170	5	256,59,110,154,189,	0,4593,7559,16079,16324,
#Deleted in new
chr22	19014352	19014506	chr22:19014352-19014506	7	+	19014352	19014352	16724991	1	154,	0,
#Deleted in new
chr22	19018042	19018916	chr22:19018042-19018916	7	-	19018042	19018042	16724991	1	874,	0,
#Deleted in new
chr22	19023055	19023550	chr22:19023055-19023550	3	+	19023055	19023055	8553170	1	495,	0,
#Partially deleted in new
chr22	19031563	19034564	chr22:19031563-19034564	7	-	19031563	19031563	16724991	8	120,87,158,67,107,170,160,36,	0,433,635,902,1270,1480,2228,2965,
#Partially deleted in new
chr22	19036281	19122454	chr22:19036281-19122454	1	-	19038864	19122206	789624	9	2840,237,153,204,177,77,220,126,327,	0,4776,5525,12158,20704,26920,28566,31818,85846,
#Partially deleted in new
chr22	19036281	19122454	chr22:19036281-19122454	1	-	19038864	19122206	789624	11	2840,237,153,204,177,77,211,5,130,123,327,	0,4776,5525,12158,20704,26920,28566,28903,31814,53086,85846,
#Partially deleted in new
chr22	19036285	19122454	chr22:19036285-19122454	3	-	19038864	19122206	789624	10	2836,237,153,204,177,77,220,126,123,327,	0,4772,5521,12154,20700,26916,28562,31814,53082,85842,
#Partially deleted in new
chr22	19036285	19122407	chr22:19036285-19122407	0	-	19038864	19057115	789624	11	2836,237,153,204,177,390,77,211,126,123,280,	0,4772,5521,12154,20700,24280,26916,28562,31814,53082,85842,
#Partially deleted in new
chr22	19037836	19057053	chr22:19037836-19057053	0	-	19037836	19037836	8553170	4	1285,902,204,68,	0,3221,10603,19149,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	19046161	19048375	chr22:19046161-19048375	3	-	19046161	19046161	789624	1	2214,	0,
#Partially deleted in new
chr22	19048378	19063277	chr22:19048378-19063277	0	-	19048378	19048378	8553170	3	265,177,76,	0,8607,14823,
#Partially deleted in new
chr22	19055800	19056512	chr22:19055800-19056512	7	+	19055800	19055800	16724991	2	223,180,	0,532,
#Partially deleted in new
chr22	19056993	19065904	chr22:19056993-19065904	0	-	19056993	19056993	8553170	4	169,77,211,149,	0,6208,7854,8762,
#Deleted in new
chr22	19061040	19061843	chr22:19061040-19061843	3	-	19061040	19061040	8553170	1	803,	0,
#Partially deleted in new
chr22	19121528	19124503	chr22:19121528-19124503	3	+	19121528	19121528	8553170	2	424,158,	0,2817,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	19124308	19128449	chr22:19124308-19128449	3	-	19124308	19124308	8553170	3	984,173,357,	0,1360,3784,
#Deleted in new
chr22	19124878	19125646	chr22:19124878-19125646	7	+	19124878	19124878	16724991	1	768,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	19130278	19144684	chr22:19130278-19144684	3	-	19134195	19144640	789624	10	4197,116,110,103,134,118,170,96,169,179,	0,4781,7044,7936,8880,9333,9576,12259,12447,14227,
#Deleted in new
chr22	19130807	19132623	chr22:19130807-19132623	3	+	19131399	19132476	789624	1	1816,	0,
#Partially deleted in new
chr22	19133936	19144684	chr22:19133936-19144684	0	-	19138419	19144640	789624	10	539,116,110,177,134,118,170,96,169,179,	0,1123,3386,4366,5222,5675,5918,8601,8789,10569,
#Partially deleted in new
chr22	19133967	19144633	chr22:19133967-19144633	0	-	19133967	19133967	8553170	10	508,116,110,103,134,118,170,96,169,577,	0,1092,3355,4247,5191,5644,5887,8570,8758,10089,
#Partially deleted in new
chr22	19142849	19144659	chr22:19142849-19144659	0	-	19142849	19142849	8553170	2	45,536,	0,1274,
#Deleted in new
chr22	19148575	19150283	chr22:19148575-19150283	3	-	19148990	19150283	789624	3	520,254,259,	0,1087,1449,
#Deleted in new
chr22	19171394	19172839	chr22:19171394-19172839	3	+	19171394	19171394	789624	1	1445,	0,
#Deleted in new
chr22	19175574	19178830	chr22:19175574-19178830	3	-	19176129	19178673	789624	9	670,74,116,105,85,139,100,108,251,	0,846,1003,1271,1545,2152,2367,2558,3005,
#Deleted in new
chr22	19175592	19178521	chr22:19175592-19178521	1	-	19176129	19177858	789624	9	652,74,116,105,85,139,100,108,135,	0,828,985,1253,1527,2134,2349,2540,2794,
#Deleted in new
chr22	19175609	19178739	chr22:19175609-19178739	0	-	19175609	19175609	8553170	8	635,74,116,105,85,315,108,160,	0,811,968,1236,1510,2117,2523,2970,
#Deleted in new
chr22	19176666	19178480	chr22:19176666-19178480	0	-	19176666	19176666	8553170	6	27,105,85,139,100,348,	0,179,453,1060,1275,1466,
#Deleted in new
chr22	19177989	19178635	chr22:19177989-19178635	0	-	19177989	19177989	8553170	2	251,56,	0,590,
#Partially deleted in new
chr22	19179472	19291714	chr22:19179472-19291714	3	-	19180218	19291641	789624	33	497,40,76,222,171,111,132,150,168,108,165,158,193,184,146,123,235,143,126,164,181,165,138,123,153,201,198,174,114,162,269,208,115,	0,726,1258,3917,8085,8508,11831,16793,17016,20261,21856,28681,29449,30853,36638,40412,41904,42478,43211,44418,45980,46746,50365,53003,53693,53949,55036,56223,59802,63302,74486,96150,112127,
#Partially deleted in new
chr22	19179472	19291685	chr22:19179472-19291685	1	-	19180218	19291641	789624	32	497,40,76,222,111,132,150,168,108,165,158,193,184,146,123,235,143,126,164,181,165,138,123,153,201,198,174,114,162,269,208,86,	0,726,1258,3917,8508,11831,16793,17016,20261,21856,28681,29449,30853,36638,40412,41904,42478,43211,44418,45980,46746,50365,53003,53693,53949,55036,56223,59802,63302,74486,96150,112127,
#Deleted in new
chr22	19179475	19184831	chr22:19179475-19184831	0	-	19179475	19179475	8553170	3	494,40,4101,	0,723,1255,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	19179475	19207676	chr22:19179475-19207676	1	-	19180218	19207586	789624	10	494,40,76,222,132,150,168,108,165,159,	0,723,1255,3914,11828,16790,17013,20258,21853,28042,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	19179774	19207674	chr22:19179774-19207674	1	-	19180218	19207586	789624	12	195,40,76,222,171,111,132,150,168,108,165,157,	0,424,956,3615,7783,8206,11529,16491,16714,19959,21554,27743,
#Partially deleted in new
chr22	19180732	19291661	chr22:19180732-19291661	0	-	19180732	19180732	8553170	30	74,222,171,111,132,391,108,165,158,193,184,146,123,235,143,126,164,181,165,138,123,153,201,198,174,114,162,269,208,62,	0,2657,6825,7248,10571,15533,19001,20596,27421,28189,29593,35378,39152,40644,41218,41951,43158,44720,45486,49105,51743,52433,52689,53776,54963,58542,62042,73226,94890,110867,
#Partially deleted in new
chr22	19180732	19291661	chr22:19180732-19291661	0	-	19199761	19291641	789624	31	74,222,171,111,132,150,168,108,103,158,193,184,146,123,235,143,126,164,181,165,138,123,153,201,198,174,114,162,269,208,62,	0,2657,6825,7248,10571,15533,15756,19001,20658,27421,28189,29593,35378,39152,40644,41218,41951,43158,44720,45486,49105,51743,52433,52689,53776,54963,58542,62042,73226,94890,110867,
#Partially deleted in new
chr22	19183475	19187728	chr22:19183475-19187728	0	-	19184503	19187728	789624	3	136,141,171,	0,920,4082,
#Partially deleted in new
chr22	19196362	19209327	chr22:19196362-19209327	0	-	19196362	19196362	8553170	5	53,168,108,103,406,	0,126,3371,5028,12559,
#Partially deleted in new
chr22	19221572	19226320	chr22:19221572-19226320	0	-	19224024	19226320	789624	5	39,143,126,164,102,	0,378,1111,2318,4646,
#Partially deleted in new
chr22	19229844	19232821	chr22:19229844-19232821	0	-	19229844	19229844	8553170	2	131,346,	0,2631,
#Deleted in new
chr22	19238442	19238739	chr22:19238442-19238739	7	-	19238442	19238442	16724991	1	297,	0,
#Partially deleted in new
chr22	19249872	19249966	chr22:19249872-19249966	3	+	19249872	19249872	8553170	1	94,	0,
#Partially deleted in new
chr22	19254033	19291716	chr22:19254033-19291716	0	-	19254033	19291641	789624	4	194,63,208,117,	0,3771,21589,37566,
#Deleted in new
chr22	19257519	19258806	chr22:19257519-19258806	7	+	19257519	19257519	16724991	1	1287,	0,
#Partially deleted in new
chr22	19330697	19431733	chr22:19330697-19431733	3	-	19331439	19431476	0	25	859,89,164,123,106,59,162,149,105,205,162,198,86,216,106,71,114,168,161,96,95,91,111,63,294,	0,20660,22658,23298,25062,25532,26192,28638,30539,31029,44933,47171,52922,54823,57013,57786,61403,63644,66089,67294,75088,76486,77785,80018,100742,
#Partially deleted in new
chr22	19330697	19431696	chr22:19330697-19431696	1	-	19331439	19431476	0	21	859,89,164,123,106,59,162,198,86,216,106,71,114,168,161,96,95,91,111,63,257,	0,20660,22658,23298,25062,25532,44933,47171,52922,54823,57013,57786,61403,63644,66089,67294,75088,76486,77785,80018,100742,
#Partially deleted in new
chr22	19351367	19447691	chr22:19351367-19447691	0	-	19408569	19447688	789624	24	79,164,123,59,162,149,105,205,162,198,86,216,106,71,114,168,161,96,95,91,111,63,168,27,	0,1988,2628,4862,5522,7968,9869,10359,24263,26501,32252,34153,36343,37116,40733,42974,45419,46624,54418,55816,57115,59348,96010,96297,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	19365765	19366044	chr22:19365765-19366044	3	+	19365765	19365765	8553170	1	279,	0,
#Partially deleted in new
chr22	19398060	19430263	chr22:19398060-19430263	0	-	19398060	19398060	8553170	6	27,95,91,111,63,173,	0,7725,9123,10422,12655,32030,
#Partially deleted in new
chr22	19398067	19447450	chr22:19398067-19447450	0	-	19408569	19447450	789624	6	20,95,91,111,63,73,	0,7718,9116,10415,12648,49310,
#Partially deleted in new
chr22	19431901	19436075	chr22:19431901-19436075	3	+	19432554	19435962	0	4	706,84,159,438,	0,1363,2834,3736,
#Partially deleted in new
chr22	19432578	19436067	chr22:19432578-19436067	0	+	19432578	19432578	8553170	4	281,84,159,430,	0,686,2157,3059,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	19432938	19436010	chr22:19432938-19436010	0	+	19432938	19432938	8553170	3	410,159,373,	0,1797,2699,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	19440885	19447692	chr22:19440885-19447692	1	-	19441643	19447688	789624	3	809,168,28,	0,6492,6779,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	19440907	19448232	chr22:19440907-19448232	1	-	19441643	19447799	789624	3	787,168,568,	0,6470,6757,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	19441776	19448232	chr22:19441776-19448232	1	-	19444264	19447799	789624	3	2614,168,568,	0,5601,5888,
#Partially deleted in new
chr22	19443149	19448232	chr22:19443149-19448232	1	-	19444264	19447799	789624	3	1241,168,568,	0,4228,4515,
#Partially deleted in new
chr22	19443370	19447697	chr22:19443370-19447697	3	-	19444264	19447688	789624	3	1020,168,33,	0,4007,4294,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	19447892	19450105	chr22:19447892-19450105	3	+	19447892	19447892	8553170	2	433,1664,	0,549,
#Partially deleted in new
chr22	19449909	19479215	chr22:19449909-19479215	3	-	19450669	19479085	0	12	835,82,89,48,66,69,73,131,122,33,133,133,	0,4839,5770,6677,6943,8161,15292,17963,21777,25158,25560,29173,
#Partially deleted in new
chr22	19450620	19479172	chr22:19450620-19479172	1	-	19450739	19479085	0	12	124,29,89,48,66,69,73,131,122,33,133,90,	0,4181,5059,5966,6232,7450,14581,17252,21066,24447,24849,28462,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr22	19450620	19479172	chr22:19450620-19479172	0	-	19450620	19450620	8553170	11	4210,89,48,66,69,73,131,122,33,107,90,	0,5059,5966,6232,7450,14581,17252,21066,24447,24875,28462,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	19450624	19467716	chr22:19450624-19467716	0	-	19450624	19450624	8553170	8	120,123,29,89,48,66,69,2515,	0,1253,4177,5055,5962,6228,7446,14577,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	19454178	19454605	chr22:19454178-19454605	3	+	19454178	19454178	8553170	1	427,	0,
#Partially deleted in new
chr22	19455679	19479202	chr22:19455679-19479202	0	-	19455679	19479085	789624	7	89,48,66,69,73,131,120,	0,907,1173,2391,9522,12193,23403,
#Deleted in new
chr22	19456502	19456962	chr22:19456502-19456962	3	+	19456502	19456502	8553170	1	460,	0,
#Partially deleted in new
chr22	19456879	19479185	chr22:19456879-19479185	0	-	19456879	19479085	789624	7	39,69,73,131,122,133,103,	0,1191,8322,10993,14807,18590,22203,
#Partially deleted in new
chr22	19465201	19479083	chr22:19465201-19479083	0	-	19465201	19465201	8553170	6	73,131,122,33,133,259,	0,2671,6485,9866,10268,13623,
#Partially deleted in new
chr22	19467402	19479187	chr22:19467402-19479187	0	-	19467402	19467402	8553170	5	601,122,33,133,105,	0,4284,7665,8067,11680,
#Partially deleted in new
chr22	19467872	19478931	chr22:19467872-19478931	0	-	19467872	19475590	789624	5	131,122,33,133,169,	0,3814,7195,7597,10890,
#Partially deleted in new
chr22	19467894	19479144	chr22:19467894-19479144	0	-	19467894	19471785	789624	3	109,122,62,	0,3792,11188,
#Partially deleted in new
chr22	19479458	19520612	chr22:19479458-19520612	3	+	19479968	19518908	789624	20	113,194,60,93,138,144,56,49,62,51,120,132,99,162,139,84,119,77,66,132,	0,367,699,1494,3231,4403,14868,16522,17927,19642,25903,27927,28307,29071,35290,35506,37068,37358,39385,41022,
#Partially deleted in new
chr22	19479481	19494353	chr22:19479481-19494353	0	+	19479556	19494353	789624	6	90,60,93,138,144,27,	0,676,1471,3208,4380,14845,
#Partially deleted in new
chr22	19479737	19482822	chr22:19479737-19482822	0	+	19479968	19482822	789624	4	282,60,93,133,	0,420,1215,2952,
#Partially deleted in new
chr22	19479737	19483873	chr22:19479737-19483873	0	+	19479737	19479737	8553170	4	480,93,138,12,	0,1215,2952,4124,
#Partially deleted in new
chr22	19479825	19520611	chr22:19479825-19520611	1	+	19479968	19518908	789624	19	194,60,93,138,144,56,49,62,51,120,132,99,162,139,84,119,77,66,131,	0,332,1127,2864,4036,14501,16155,17560,19275,25536,27560,27940,28704,34923,35139,36701,36991,39018,40655,
#Partially deleted in new
chr22	19479825	19520611	chr22:19479825-19520611	1	+	19479968	19518908	789624	20	194,60,93,138,144,56,96,49,62,51,120,132,99,162,139,84,119,77,66,131,	0,332,1127,2864,4036,14501,14681,16155,17560,19275,25536,27560,27940,28704,34923,35139,36701,36991,39018,40655,
#Partially deleted in new
chr22	19479900	19495986	chr22:19479900-19495986	0	+	19479900	19479900	8553170	8	119,60,93,138,144,56,96,6,	0,257,1052,2789,3961,14426,14606,16080,
#Partially deleted in new
chr22	19479937	19520578	chr22:19479937-19520578	1	+	19479968	19518908	789624	18	82,60,93,144,56,49,62,51,120,132,99,162,139,84,119,77,66,98,	0,220,1015,3924,14389,16043,17448,19163,25424,27448,27828,28592,34811,35027,36589,36879,38906,40543,
#Partially deleted in new
chr22	19480149	19497444	chr22:19480149-19497444	0	+	19480149	19480149	8553170	8	68,93,138,144,56,129,49,59,	0,803,2540,3712,14177,14324,15831,17236,
#Partially deleted in new
chr22	19482750	19505370	chr22:19482750-19505370	0	+	19482750	19494486	789624	8	77,144,56,129,49,62,51,9,	0,1111,11576,11723,13230,14635,16350,22611,
#Partially deleted in new
chr22	19505053	19514784	chr22:19505053-19514784	0	+	19505053	19505053	8553170	5	428,132,99,162,36,	0,2332,2712,3476,9695,
#Partially deleted in new
chr22	19516433	19520594	chr22:19516433-19520594	0	+	19516433	19516433	8553170	4	212,77,66,114,	0,383,2410,4047,
#Deleted in new
chr22	19523023	19527545	chr22:19523023-19527545	1	-	19523598	19524510	789624	2	1519,1029,	0,3493,
#Deleted in new
chr22	19523026	19525383	chr22:19523026-19525383	1	-	19523598	19524510	789624	1	2357,	0,
#Deleted in new
chr22	19523026	19524400	chr22:19523026-19524400	3	-	19523598	19524255	789624	1	1374,	0,
#Deleted in new
chr22	19523051	19525423	chr22:19523051-19525423	1	-	19523598	19524510	789624	2	1491,269,	0,2103,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	19565202	19566839	chr22:19565202-19566839	3	-	19565202	19565202	8553170	1	1637,	0,
#Partially deleted in new
chr22	19630749	19633574	chr22:19630749-19633574	7	-	19630749	19630749	16724991	3	378,448,127,	0,970,2698,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	19667022	19667555	chr22:19667022-19667555	3	+	19667022	19667022	8553170	2	177,110,	0,423,
#Deleted in new
chr22	19714463	19723319	chr22:19714463-19723319	3	+	19714588	19722484	789624	12	168,11,97,87,124,135,118,102,97,136,103,892,	0,317,5138,5342,5651,5856,6085,6304,7176,7358,7773,7964,
#Deleted in new
chr22	19714503	19723274	chr22:19714503-19723274	1	+	19714588	19722311	789624	12	128,11,97,87,124,135,118,102,97,125,103,847,	0,277,5098,5302,5611,5816,6045,6264,7136,7329,7733,7924,
#Deleted in new
chr22	19714528	19723319	chr22:19714528-19723319	0	+	19714588	19721851	789624	10	103,11,97,87,124,135,118,102,136,1083,	0,252,5073,5277,5586,5791,6020,6239,7293,7708,
#Deleted in new
chr22	19714674	19722331	chr22:19714674-19722331	0	+	19719688	19722331	789624	10	117,97,87,124,135,118,102,97,136,95,	0,4927,5131,5440,5645,5874,6093,6965,7147,7562,
#Deleted in new
chr22	19717219	19724216	chr22:19717219-19724216	3	+	19718737	19722484	789624	12	1599,97,87,124,135,118,102,97,136,103,1152,363,	0,2382,2586,2895,3100,3329,3548,4420,4602,5017,5208,6634,
#Deleted in new
chr22	19717269	19721720	chr22:19717269-19721720	0	+	19717277	19721720	789624	8	176,97,87,124,135,118,102,81,	0,2332,2536,2845,3050,3279,3498,4370,
#Deleted in new
chr22	19718158	19719055	chr22:19718158-19719055	0	+	19718158	19718158	8553170	2	660,114,	0,783,
#Deleted in new
chr22	19718431	19722629	chr22:19718431-19722629	1	+	19718737	19722484	789624	11	387,97,87,124,135,118,102,97,136,103,202,	0,1170,1374,1683,1888,2117,2336,3208,3390,3805,3996,
#Deleted in new
chr22	19718457	19723319	chr22:19718457-19723319	1	+	19718737	19722311	789624	11	361,97,87,124,135,118,102,97,125,103,892,	0,1144,1348,1657,1862,2091,2310,3182,3375,3779,3970,
#Deleted in new
chr22	19718468	19724772	chr22:19718468-19724772	0	+	19719688	19722484	789624	12	103,97,87,124,135,118,102,97,136,103,1152,919,	0,1133,1337,1646,1851,2080,2299,3171,3353,3768,3959,5385,
#Deleted in new
chr22	19719434	19720833	chr22:19719434-19720833	0	+	19719688	19720833	789624	6	264,87,124,135,118,66,	0,371,680,885,1114,1333,
#Deleted in new
chr22	19719529	19720213	chr22:19719529-19720213	0	+	19719529	19719529	8553170	2	169,408,	0,276,
#Deleted in new
chr22	19720187	19720874	chr22:19720187-19720874	0	+	19720187	19720874	789624	4	51,135,25,107,	0,132,454,580,
#Deleted in new
chr22	19720341	19721869	chr22:19720341-19721869	0	+	19720341	19720341	8553170	4	113,118,102,230,	0,207,426,1298,
#Deleted in new
chr22	19720553	19724224	chr22:19720553-19724224	0	+	19720553	19720553	8553170	6	113,102,97,518,1152,371,	0,214,1086,1268,1874,3300,
#Deleted in new
chr22	19722944	19724771	chr22:19722944-19724771	3	+	19723569	19724464	0	2	635,918,	0,909,
#Partially deleted in new
chr22	19756702	19779546	chr22:19756702-19779546	1	+	19759643	19779407	0	9	43,120,376,102,172,156,68,101,327,	0,2855,4202,6538,7452,8255,9055,9199,22517,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	19756702	19767334	chr22:19756702-19767334	3	+	19759643	19766867	0	9	43,120,376,102,172,156,68,101,946,	0,2855,4202,6538,7452,8255,9055,9199,9686,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	19756702	19783593	chr22:19756702-19783593	1	+	19759643	19783022	0	10	43,120,376,102,172,156,68,101,120,280,	0,2855,4202,6538,7452,8255,9055,9199,26210,26611,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	19760820	19767332	chr22:19760820-19767332	1	+	19760843	19766867	8553170	7	460,102,172,156,68,101,944,	0,2420,3334,4137,4937,5081,5568,
#Deleted in new
chr22	19761196	19763702	chr22:19761196-19763702	0	+	19761196	19761196	8553170	2	84,462,	0,2044,
#Deleted in new
chr22	19765078	19766327	chr22:19765078-19766327	0	+	19765078	19765078	8553170	3	35,68,426,	0,679,823,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	19783223	19854939	chr22:19783223-19854939	3	-	19788708	19821355	789624	8	5737,216,99,163,126,148,97,120,	0,18777,23435,29061,37374,38004,71219,71596,
#Partially deleted in new
chr22	19788414	19854843	chr22:19788414-19854843	1	-	19788708	19821355	789624	7	546,216,99,163,126,148,401,	0,13586,18244,23870,32183,32813,66028,
#Partially deleted in new
chr22	19788417	19854939	chr22:19788417-19854939	1	-	19788617	19821355	789624	8	209,114,99,163,126,148,97,120,	0,13685,18241,23867,32180,32810,66025,66402,
#Partially deleted in new
chr22	19788463	19854806	chr22:19788463-19854806	0	-	19788463	19788463	8553170	6	497,216,99,163,97,125,	0,13537,18195,23821,65979,66218,
#Deleted in new
chr22	19792293	19793094	chr22:19792293-19793094	7	+	19792293	19792293	16724991	1	801,	0,
#Partially deleted in new
chr22	19801998	19854816	chr22:19801998-19854816	0	-	19801998	19801998	8553170	4	218,99,163,374,	0,4660,10286,52444,
#Partially deleted in new
chr22	19812294	19854843	chr22:19812294-19854843	0	-	19812294	19821355	789624	3	153,148,401,	0,8933,42148,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	19846137	19854896	chr22:19846137-19854896	3	-	19851166	19852261	789624	3	6349,97,77,	0,8305,8682,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	19846145	19854840	chr22:19846145-19854840	1	-	19851166	19852261	789624	3	6341,97,181,	0,8297,8514,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	19846145	19854886	chr22:19846145-19854886	1	-	19851166	19852261	789624	2	6341,444,	0,8297,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	19846145	19854863	chr22:19846145-19854863	0	-	19846145	19846145	8553170	3	1244,97,44,	0,8297,8674,
#Deleted in new
chr22	19851988	19854816	chr22:19851988-19854816	0	-	19851988	19852261	789624	3	498,97,135,	0,2454,2693,
#Partially deleted in new
chr22	19875516	19932553	chr22:19875516-19932553	1	-	19877104	19932369	789624	18	291,195,98,72,93,96,137,175,92,20,71,63,79,75,145,57,69,197,	0,1523,2573,2849,4662,5105,7808,19890,22522,23532,35860,39697,40248,42626,43343,44026,55513,56840,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	19875517	19916366	chr22:19875517-19916366	0	-	19875517	19875517	8553170	13	290,195,98,72,93,96,137,175,92,20,71,63,602,	0,1522,2572,2848,4661,5104,7807,19889,22521,23531,35859,39696,40247,
#Partially deleted in new
chr22	19875518	19941807	chr22:19875518-19941807	0	-	19877208	19941803	789624	17	289,173,98,72,93,96,137,175,92,20,71,63,79,75,145,69,107,	0,1521,2571,2847,4660,5103,7806,19888,22520,23530,35858,39695,40246,42624,43341,55511,66182,
#Partially deleted in new
chr22	19875521	19941803	chr22:19875521-19941803	1	-	19877104	19941803	789624	17	1713,98,72,93,96,137,175,92,20,71,63,79,75,145,57,66,103,	0,2568,2844,4657,5100,7803,19885,22517,23527,35855,39692,40243,42621,43338,44021,55508,66179,
#Partially deleted in new
chr22	19875521	19941992	chr22:19875521-19941992	3	-	19877104	19941803	0	18	286,195,98,72,93,96,137,175,92,20,71,63,79,75,145,57,69,292,	0,1518,2568,2844,4657,5100,7803,19885,22517,23527,35855,39692,40243,42621,43338,44021,55508,66179,
#Partially deleted in new
chr22	19875521	19941820	chr22:19875521-19941820	1	-	19877104	19941803	789624	17	286,195,98,72,93,96,137,175,92,20,71,63,79,75,145,57,120,	0,1518,2568,2844,4657,5100,7803,19885,22517,23527,35855,39692,40243,42621,43338,44021,66179,
#Deleted in new
chr22	19875521	19881369	chr22:19875521-19881369	1	-	19877104	19881089	789624	7	286,195,98,72,93,96,289,	0,1518,2568,2844,4657,5100,5559,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	19875521	19884504	chr22:19875521-19884504	0	-	19875521	19875521	8553170	7	286,195,98,72,93,96,1180,	0,1518,2568,2844,4657,5100,7803,
#Partially deleted in new
chr22	19875521	19898041	chr22:19875521-19898041	0	-	19875521	19898041	789624	9	286,126,98,72,93,96,137,175,3,	0,1587,2568,2844,4657,5100,7803,19885,22517,
#Deleted in new
chr22	19875523	19881347	chr22:19875523-19881347	0	-	19875523	19875523	8553170	5	1711,98,72,93,726,	0,2566,2842,4655,5098,
#Deleted in new
chr22	19875640	19881164	chr22:19875640-19881164	1	-	19877104	19881089	789624	7	167,195,98,72,93,96,129,	0,1399,2449,2725,4538,4981,5395,
#Deleted in new
chr22	19875691	19881154	chr22:19875691-19881154	0	-	19875691	19880891	789624	8	116,126,98,72,93,96,90,119,	0,1417,2398,2674,4487,4930,5164,5344,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	19875760	19883567	chr22:19875760-19883567	0	-	19875760	19875760	8553170	6	47,195,98,72,93,243,	0,1279,2329,2605,4418,7564,
#Deleted in new
chr22	19887288	19887970	chr22:19887288-19887970	7	+	19887288	19887288	16724991	1	682,	0,
#Partially deleted in new
chr22	19891437	19918177	chr22:19891437-19918177	0	-	19891437	19891437	8553170	8	323,175,92,20,71,63,79,35,	0,3969,6601,7611,19939,23776,24327,26705,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	19893901	19933526	chr22:19893901-19933526	1	-	19895132	19933440	789624	12	1299,175,92,20,71,63,79,75,145,57,69,93,	0,1505,4137,5147,17475,21312,21863,24241,24958,25641,37128,39532,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	19894257	19941804	chr22:19894257-19941804	1	-	19895132	19941803	789624	12	943,175,92,20,71,63,79,75,145,57,69,104,	0,1149,3781,4791,17119,20956,21507,23885,24602,25285,36772,47443,
#Partially deleted in new
chr22	19895015	19915789	chr22:19895015-19915789	0	-	19895252	19915789	789624	7	305,175,92,20,71,63,25,	0,391,3023,4033,16361,20198,20749,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	19910934	19918221	chr22:19910934-19918221	0	-	19910934	19910934	8553170	5	137,71,63,79,79,	0,442,4279,4830,7208,
#Partially deleted in new
chr22	19911257	19915837	chr22:19911257-19915837	0	-	19911257	19911257	8553170	3	190,63,73,	0,3956,4507,
#Partially deleted in new
chr22	19914899	19941808	chr22:19914899-19941808	0	-	19914899	19914899	8553170	7	377,79,75,145,57,69,108,	0,865,3243,3960,4643,16130,26801,
#Partially deleted in new
chr22	19941606	19969975	chr22:19941606-19969975	3	+	19962526	19968736	0	6	291,91,289,194,132,1440,	0,19592,20920,21959,22561,26929,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	19941732	19965645	chr22:19941732-19965645	1	+	19962526	19964392	789624	5	165,91,289,194,1478,	0,19466,20794,21833,22435,
#Partially deleted in new
chr22	19941772	19968958	chr22:19941772-19968958	1	+	19962526	19968736	0	6	125,91,583,194,132,423,	0,19426,20460,21793,22395,26763,
#Partially deleted in new
chr22	19941787	19968998	chr22:19941787-19968998	1	+	19962526	19968736	0	7	110,91,178,289,194,132,463,	0,19411,19909,20739,21778,22380,26748,
#Partially deleted in new
chr22	19941792	19962876	chr22:19941792-19962876	0	+	19941792	19941792	8553170	3	105,91,350,	0,19406,20734,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	19950941	19968589	chr22:19950941-19968589	0	+	19962526	19968589	789624	6	111,91,289,194,132,54,	0,10257,11585,12624,13226,17594,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	19950978	19969016	chr22:19950978-19969016	0	+	19962526	19964226	789624	6	74,91,289,194,190,481,	0,10220,11548,12587,13131,17557,
#Partially deleted in new
chr22	19951502	19969016	chr22:19951502-19969016	1	+	19962526	19968736	0	6	152,91,289,194,132,481,	0,9696,11024,12063,12665,17033,
#Partially deleted in new
chr22	19962569	19968998	chr22:19962569-19968998	1	+	19962676	19968736	0	4	246,194,132,463,	0,996,1598,5966,
#Deleted in new
chr22	19963344	19964300	chr22:19963344-19964300	0	+	19963344	19963344	8553170	3	27,194,133,	0,221,823,
#Partially deleted in new
chr22	19963698	19967694	chr22:19963698-19967694	0	+	19963698	19967427	789624	3	61,132,531,	0,469,3465,
#Deleted in new
chr22	19963752	19963834	chr22:19963752-19963834	3	+	19963752	19963752	5263520	1	82,	0,
#Partially deleted in new
chr22	19969895	20016808	chr22:19969895-20016808	3	-	19971227	19990794	789624	20	848,120,86,54,91,112,199,151,128,72,18,172,118,184,500,527,159,228,54,220,	0,1320,1990,2462,2841,3029,3223,3747,4216,5790,6810,7519,8062,9001,9847,11315,12037,20689,40559,46693,
#Deleted in new
chr22	19969897	19979416	chr22:19969897-19979416	0	-	19969897	19969897	8553170	12	846,86,54,91,112,199,151,128,72,172,118,520,	0,1988,2460,2839,3027,3221,3745,4214,5788,7517,8060,8999,
#Partially deleted in new
chr22	19971227	19987093	chr22:19971227-19987093	1	-	19971227	19987093	789624	17	108,86,54,91,112,199,151,128,72,18,172,118,184,500,527,159,21,	0,658,1130,1509,1697,1891,2415,2884,4458,5478,6187,6730,7669,8515,9983,10705,15845,
#Partially deleted in new
chr22	19971227	19990794	chr22:19971227-19990794	1	-	19971227	19990794	789624	16	108,86,54,91,112,199,151,128,72,172,118,184,500,527,159,210,	0,658,1130,1509,1697,1891,2415,2884,4458,6187,6730,7669,8515,9983,10705,19357,
#Partially deleted in new
chr22	19971227	19987093	chr22:19971227-19987093	1	-	19971227	19987093	789624	16	108,86,54,91,112,199,151,128,72,172,118,184,500,527,159,21,	0,658,1130,1509,1697,1891,2415,2884,4458,6187,6730,7669,8515,9983,10705,15845,
#Deleted in new
chr22	19973161	19975762	chr22:19973161-19975762	0	-	19973161	19973161	8553170	4	156,151,167,77,	0,481,950,2524,
#Partially deleted in new
chr22	19979996	19990792	chr22:19979996-19990792	0	-	19979996	19979996	8553170	3	1741,159,208,	0,1936,10588,
#Partially deleted in new
chr22	19981151	19987190	chr22:19981151-19987190	0	-	19981151	19981151	8553170	3	586,159,118,	0,781,5921,
#Partially deleted in new
chr22	19981381	19987155	chr22:19981381-19987155	0	-	19981381	19981381	8553170	4	356,159,33,83,	0,551,5269,5691,
#Partially deleted in new
chr22	19981544	19983753	chr22:19981544-19983753	0	-	19981544	19981544	8553170	3	193,159,81,	0,388,2128,
#Partially deleted in new
chr22	19981990	20016745	chr22:19981990-20016745	0	-	19981990	19981990	8553170	2	101,157,	0,34598,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	20017013	20065358	chr22:20017013-20065358	1	+	20036798	20064662	789624	7	179,95,89,120,154,105,817,	0,19746,26341,35451,44516,46324,47528,
#Partially deleted in new
chr22	20017013	20056204	chr22:20017013-20056204	0	+	20017013	20017013	8553170	5	179,95,89,120,262,	0,19746,26341,35451,38929,
#Partially deleted in new
chr22	20017030	20052584	chr22:20017030-20052584	0	+	20036798	20052584	789624	5	162,119,95,89,120,	0,2150,19729,26324,35434,
#Partially deleted in new
chr22	20021068	20061656	chr22:20021068-20061656	0	+	20021068	20021068	8553170	6	66,95,89,120,71,127,	0,15691,22286,31396,34874,40461,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	20021068	20065925	chr22:20021068-20065925	1	+	20036798	20063396	789624	6	66,95,89,120,105,1384,	0,15691,22286,31396,42269,43473,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	20021068	20065925	chr22:20021068-20065925	1	+	20052498	20064662	789624	8	66,95,89,120,71,154,105,1384,	0,15691,22286,31396,34874,40461,42269,43473,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	20021068	20065925	chr22:20021068-20065925	1	+	20036915	20064564	789624	7	66,335,89,120,115,71,1384,	0,15691,22286,31396,32368,34874,43473,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	20021068	20065925	chr22:20021068-20065925	1	+	20036798	20064662	789624	7	178,95,89,120,115,105,1384,	0,15691,22286,31396,32368,42269,43473,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	20021068	20065925	chr22:20021068-20065925	1	+	20036915	20064662	789624	9	66,335,89,120,115,71,154,105,1384,	0,15691,22286,31396,32368,34874,40461,42269,43473,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	20021071	20065926	chr22:20021071-20065926	1	+	20036798	20064662	789624	7	63,95,89,120,154,105,1385,	0,15688,22283,31393,40458,42266,43470,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	20021088	20065862	chr22:20021088-20065862	0	+	20036915	20056007	789624	8	46,335,89,120,71,154,105,1321,	0,15671,22266,31376,34854,40441,42249,43453,
#Partially deleted in new
chr22	20021101	20061576	chr22:20021101-20061576	0	+	20036798	20061574	789624	7	33,95,89,120,115,71,47,	0,15658,22253,31363,32335,34841,40428,
#Partially deleted in new
chr22	20021106	20065264	chr22:20021106-20065264	0	+	20036798	20053460	789624	9	140,95,89,120,192,71,154,105,723,	0,15653,22248,31358,32253,34836,40423,42231,43435,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	20021107	20065926	chr22:20021107-20065926	3	+	20036798	20064662	789624	9	139,95,89,120,115,71,154,105,1385,	0,15652,22247,31357,32329,34835,40422,42230,43434,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	20021121	20053542	chr22:20021121-20053542	0	+	20021121	20021121	8553170	6	125,95,89,359,120,106,	0,15638,22233,26848,31343,32315,
#Partially deleted in new
chr22	20021126	20063421	chr22:20021126-20063421	0	+	20036798	20056007	789624	7	120,95,89,120,71,154,84,	0,15633,22228,31338,34816,40403,42211,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	20021138	20065364	chr22:20021138-20065364	1	+	20036915	20064662	789624	9	108,335,89,120,115,71,154,105,823,	0,15621,22216,31326,32298,34804,40391,42199,43403,
#Partially deleted in new
chr22	20021154	20063411	chr22:20021154-20063411	0	+	20036798	20063411	789624	8	144,95,89,120,115,71,154,74,	0,15605,22200,31310,32282,34788,40375,42183,
#Deleted in new
chr22	20033138	20033220	chr22:20033138-20033220	3	+	20033138	20033138	5263520	1	82,	0,
#Partially deleted in new
chr22	20036758	20064907	chr22:20036758-20064907	0	+	20036798	20056007	789624	6	96,89,120,71,105,366,	0,6596,15706,19184,26579,27783,
#Partially deleted in new
chr22	20036758	20061802	chr22:20036758-20061802	0	+	20036758	20036758	8553170	5	96,89,120,71,273,	0,6596,15706,19184,24771,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	20036759	20056241	chr22:20036759-20056241	0	+	20036759	20036759	8553170	4	95,89,120,2805,	0,6595,15705,16677,
#Partially deleted in new
chr22	20036759	20063383	chr22:20036759-20063383	0	+	20036759	20036759	8553170	6	95,89,120,115,152,46,	0,6595,15705,16677,24770,26578,
#Partially deleted in new
chr22	20053434	20064959	chr22:20053434-20064959	0	+	20053434	20053434	8553170	5	117,71,177,105,418,	0,2508,8095,9903,11107,
#Partially deleted in new
chr22	20055942	20061227	chr22:20055942-20061227	0	+	20055942	20055942	8553170	2	71,54,	0,5231,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	20058029	20065251	chr22:20058029-20065251	1	-	20058029	20058029	8553170	2	444,106,	0,7116,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	20062979	20066077	chr22:20062979-20066077	0	-	20062979	20062979	8553170	3	174,135,199,	0,2166,2899,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	20063010	20070261	chr22:20063010-20070261	0	-	20063010	20063010	8553170	4	118,135,122,291,	0,2135,6032,6960,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	20063010	20070569	chr22:20063010-20070569	3	-	20063010	20063010	8553170	4	140,135,122,599,	0,2135,6032,6960,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	20063010	20070522	chr22:20063010-20070522	1	-	20063010	20063010	8553170	3	118,135,552,	0,2135,6960,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	20063010	20070454	chr22:20063010-20070454	1	-	20063010	20063010	8553170	4	137,135,122,484,	0,2135,6032,6960,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	20063010	20069162	chr22:20063010-20069162	0	-	20063010	20063010	8553170	4	140,135,236,120,	0,2135,4003,6032,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	20063010	20070500	chr22:20063010-20070500	1	-	20063010	20063010	8553170	4	143,135,122,530,	0,2135,6032,6960,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	20063010	20066434	chr22:20063010-20066434	0	-	20063010	20063010	8553170	3	140,135,556,	0,2135,2868,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	20063033	20070543	chr22:20063033-20070543	1	-	20063033	20063033	8553170	3	120,135,573,	0,2112,6937,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	20063033	20069165	chr22:20063033-20069165	1	-	20063033	20063033	8553170	4	95,135,236,123,	0,2112,3980,6009,
#Deleted in new
chr22	20063572	20064929	chr22:20063572-20064929	0	+	20063572	20063572	8553170	2	26,388,	0,969,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	20064551	20065705	chr22:20064551-20065705	3	-	20064551	20064551	8553170	2	373,210,	0,944,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	20070715	20070965	chr22:20070715-20070965	3	+	20070715	20070715	8553170	1	250,	0,
#Partially deleted in new
chr22	20080231	20111871	chr22:20080231-20111871	3	+	20085963	20110108	0	14	152,997,160,143,283,198,102,99,83,101,107,128,114,1847,	0,5455,6930,9437,9744,11203,11637,12577,14481,25945,26360,27039,28658,29793,
#Partially deleted in new
chr22	20080231	20111875	chr22:20080231-20111875	1	+	20085963	20110108	0	13	152,997,160,143,283,198,102,83,101,107,128,114,1851,	0,5455,6930,9437,9744,11203,11637,14481,25945,26360,27039,28658,29793,
#Partially deleted in new
chr22	20080568	20086339	chr22:20080568-20086339	0	+	20085963	20086339	789624	2	117,653,	0,5118,
#Partially deleted in new
chr22	20085745	20085833	chr22:20085745-20085833	3	+	20085745	20085745	5263520	1	88,	0,
#Partially deleted in new
chr22	20085819	20111872	chr22:20085819-20111872	0	+	20085819	20085819	8553170	12	1502,143,283,198,102,99,83,101,94,128,114,1848,	0,3849,4156,5615,6049,6989,8893,20357,20772,21451,23070,24205,
#Partially deleted in new
chr22	20085821	20111872	chr22:20085821-20111872	1	+	20085963	20110108	0	12	862,160,143,283,198,102,83,101,107,128,114,1848,	0,1340,3847,4154,5613,6047,8891,20355,20770,21449,23068,24203,
#Partially deleted in new
chr22	20086057	20086142	chr22:20086057-20086142	3	+	20086057	20086057	5263520	1	85,	0,
#Partially deleted in new
chr22	20087035	20111877	chr22:20087035-20111877	0	+	20087035	20087035	8553170	11	286,590,198,102,99,83,101,107,128,114,1853,	0,2633,4399,4833,5773,7677,19141,19556,20235,21854,22989,
#Partially deleted in new
chr22	20094711	20107036	chr22:20094711-20107036	0	+	20094711	20094711	8553170	3	84,101,445,	0,11465,11880,
#Deleted in new
chr22	20106181	20107575	chr22:20106181-20107575	0	+	20106181	20106181	8553170	3	96,107,305,	0,410,1089,
#Deleted in new
chr22	20106566	20109184	chr22:20106566-20109184	0	+	20106566	20106566	8553170	3	132,128,295,	0,704,2323,
#Deleted in new
chr22	20107571	20111261	chr22:20107571-20111261	0	+	20107571	20107571	8553170	2	1432,1237,	0,2453,
#Deleted in new
chr22	20110820	20111875	chr22:20110820-20111875	3	-	20110820	20110820	8553170	2	439,87,	0,968,
#Deleted in new
chr22	20111865	20117295	chr22:20111865-20117295	1	-	20112562	20116906	789624	12	929,97,117,76,123,112,116,115,182,109,575,413,	0,1045,1252,1566,1820,2708,2895,3099,3400,3806,4172,5017,
#Deleted in new
chr22	20111874	20117392	chr22:20111874-20117392	3	-	20112562	20116906	789624	13	920,97,117,76,123,112,116,115,182,109,575,90,296,	0,1036,1243,1557,1811,2699,2886,3090,3391,3797,4163,5008,5222,
#Deleted in new
chr22	20112300	20113507	chr22:20112300-20113507	0	-	20112562	20113507	789624	4	494,52,117,76,	0,655,817,1131,
#Deleted in new
chr22	20112300	20113178	chr22:20112300-20113178	0	-	20112300	20112300	8553170	2	494,268,	0,610,
#Deleted in new
chr22	20112303	20117245	chr22:20112303-20117245	1	-	20112773	20116906	789624	12	513,97,117,76,123,112,116,115,182,109,575,363,	0,607,814,1128,1382,2270,2457,2661,2962,3368,3734,4579,
#Deleted in new
chr22	20112327	20113798	chr22:20112327-20113798	0	-	20112327	20112327	8553170	4	680,117,130,113,	0,790,1104,1358,
#Deleted in new
chr22	20112337	20117222	chr22:20112337-20117222	1	-	20112562	20116906	789624	12	457,97,117,130,123,112,116,115,182,109,575,340,	0,573,780,1094,1348,2236,2423,2627,2928,3334,3700,4545,
#Deleted in new
chr22	20112498	20113378	chr22:20112498-20113378	0	-	20112498	20112498	8553170	3	296,97,261,	0,412,619,
#Deleted in new
chr22	20112567	20113808	chr22:20112567-20113808	0	-	20112567	20113808	789624	3	227,76,123,	0,864,1118,
#Deleted in new
chr22	20112891	20115812	chr22:20112891-20115812	0	-	20112891	20112891	8553170	9	116,117,76,123,112,116,115,182,141,	0,226,540,794,1682,1869,2073,2374,2780,
#Deleted in new
chr22	20113117	20115688	chr22:20113117-20115688	0	-	20113117	20113117	8553170	8	117,76,123,108,116,115,182,17,	0,314,568,1456,1643,1847,2148,2554,
#Deleted in new
chr22	20113485	20115439	chr22:20113485-20115439	0	-	20113485	20113485	8553170	5	22,123,112,116,475,	0,200,1088,1275,1479,
#Deleted in new
chr22	20113649	20114868	chr22:20113649-20114868	0	-	20113649	20113649	8553170	3	159,112,108,	0,924,1111,
#Deleted in new
chr22	20113703	20115392	chr22:20113703-20115392	0	-	20113703	20113703	8553170	4	105,108,116,428,	0,870,1057,1261,
#Deleted in new
chr22	20114685	20114751	chr22:20114685-20114751	3	-	20114685	20114685	5263520	1	66,	0,
#Deleted in new
chr22	20114766	20115622	chr22:20114766-20115622	0	-	20114766	20114766	8553170	3	110,115,357,	0,198,499,
#Deleted in new
chr22	20115336	20116550	chr22:20115336-20116550	0	-	20115336	20115336	8553170	2	444,513,	0,701,
#Deleted in new
chr22	20115348	20116100	chr22:20115348-20116100	0	-	20115348	20115348	8553170	3	206,109,63,	0,323,689,
#Deleted in new
chr22	20115576	20117183	chr22:20115576-20117183	0	-	20115576	20115576	8553170	3	204,555,301,	0,481,1306,
#Deleted in new
chr22	20115609	20117203	chr22:20115609-20117203	0	-	20115609	20115609	8553170	4	171,575,90,107,	0,428,1273,1487,
#Partially deleted in new
chr22	20115937	20127357	chr22:20115937-20127357	1	+	20116184	20127052	789624	6	493,137,158,129,66,406,	0,3075,6326,9370,10365,11014,
#Partially deleted in new
chr22	20115937	20122377	chr22:20115937-20122377	0	+	20116184	20122377	789624	3	493,137,114,	0,3075,6326,
#Partially deleted in new
chr22	20115937	20127181	chr22:20115937-20127181	0	+	20116184	20119023	789624	6	458,137,158,118,129,879,	0,3075,6326,6642,9370,10365,
#Deleted in new
chr22	20116241	20117239	chr22:20116241-20117239	0	-	20116241	20116600	789624	2	371,211,	0,787,
#Partially deleted in new
chr22	20117423	20127355	chr22:20117423-20127355	1	+	20117649	20127052	0	6	241,137,158,129,66,401,	0,1589,4840,7884,8879,9531,
#Partially deleted in new
chr22	20117523	20122684	chr22:20117523-20122684	0	+	20117523	20117523	8553170	3	141,137,421,	0,1489,4740,
#Partially deleted in new
chr22	20117547	20127181	chr22:20117547-20127181	3	+	20117649	20127052	0	6	117,137,158,129,66,230,	0,1465,4716,7760,8755,9404,
#Partially deleted in new
chr22	20117556	20125488	chr22:20117556-20125488	0	+	20117649	20125488	789624	4	108,137,158,181,	0,1456,4707,7751,
#Deleted in new
chr22	20117652	20119529	chr22:20117652-20119529	0	+	20117652	20117652	8553170	2	12,517,	0,1360,
#Partially deleted in new
chr22	20117781	20122421	chr22:20117781-20122421	0	+	20119147	20122421	789624	3	350,137,158,	0,1231,4482,
#Partially deleted in new
chr22	20117874	20122421	chr22:20117874-20122421	0	+	20119147	20122421	789624	3	38,137,158,	0,1138,4389,
#Partially deleted in new
chr22	20117933	20126627	chr22:20117933-20126627	0	+	20119147	20126627	789624	5	83,137,158,129,325,	0,1079,4330,7374,8369,
#Partially deleted in new
chr22	20117952	20127035	chr22:20117952-20127035	0	+	20119147	20127035	789624	6	361,137,158,129,66,81,	0,1060,4311,7355,8350,9002,
#Deleted in new
chr22	20122606	20127353	chr22:20122606-20127353	0	+	20122606	20122606	8553170	4	91,129,66,402,	0,2701,3696,4345,
#Deleted in new
chr22	20124138	20127181	chr22:20124138-20127181	0	+	20124138	20124138	8553170	2	1298,879,	0,2164,
#Deleted in new
chr22	20126401	20126526	chr22:20126401-20126526	3	+	20126401	20126401	8553170	1	125,	0,
#Partially deleted in new
chr22	20129455	20139909	chr22:20129455-20139909	0	+	20129471	20139909	789624	4	87,122,158,190,	0,9738,10022,10264,
#Partially deleted in new
chr22	20131806	20148007	chr22:20131806-20148007	3	+	20131947	20145400	789624	11	245,122,158,173,103,92,142,121,110,1001,2779,	0,7387,7671,7913,8308,8810,9064,9410,9614,10949,13422,
#Partially deleted in new
chr22	20131947	20146450	chr22:20131947-20146450	1	+	20131947	20145400	789624	9	104,122,158,92,142,121,110,1001,1222,	0,7246,7530,8669,8923,9269,9473,10808,13281,
#Partially deleted in new
chr22	20131947	20148006	chr22:20131947-20148006	1	+	20131947	20147231	789624	11	104,122,158,173,103,92,142,121,110,1001,986,	0,7246,7530,7772,8167,8669,8923,9269,9473,10808,15073,
#Partially deleted in new
chr22	20131994	20141532	chr22:20131994-20141532	0	+	20131994	20131994	8553170	5	57,92,142,121,112,	0,8622,8876,9222,9426,
#Deleted in new
chr22	20139936	20141326	chr22:20139936-20141326	0	+	20139936	20139936	8553170	4	281,92,142,110,	0,680,934,1280,
#Deleted in new
chr22	20140404	20142987	chr22:20140404-20142987	0	+	20140404	20140404	8553170	5	304,142,121,110,232,	0,466,812,1016,2351,
#Deleted in new
chr22	20148426	20151065	chr22:20148426-20151065	3	-	20148613	20150986	789624	9	374,50,58,65,60,57,105,108,598,	0,448,760,985,1154,1297,1528,1716,2041,
#Deleted in new
chr22	20148585	20149903	chr22:20148585-20149903	0	-	20148585	20148585	8553170	6	215,50,58,65,60,180,	0,289,601,826,995,1138,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	20198728	20204918	chr22:20198728-20204918	3	-	20198728	20198728	789624	4	523,1272,167,266,	0,1326,5604,5924,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	20206396	20208524	chr22:20206396-20208524	3	+	20206396	20206396	789624	1	2128,	0,
#Deleted in new
chr22	20206576	20207183	chr22:20206576-20207183	0	+	20206576	20206576	8553170	1	607,	0,
#Partially deleted in new
chr22	20241414	20268531	chr22:20241414-20268531	3	-	20241710	20268092	0	2	1696,461,	0,26656,
#Partially deleted in new
chr22	20241414	20267689	chr22:20241414-20267689	0	-	20241710	20267689	789624	2	1696,81,	0,26194,
#Deleted in new
chr22	20241416	20243684	chr22:20241416-20243684	0	-	20241710	20243684	789624	2	1694,279,	0,1989,
#Partially deleted in new
chr22	20242596	20271747	chr22:20242596-20271747	0	-	20242596	20242596	8553170	2	514,158,	0,28993,
#Partially deleted in new
chr22	20242848	20283246	chr22:20242848-20283246	0	-	20242848	20242848	8553170	3	262,93,204,	0,34892,40194,
#Partially deleted in new
chr22	20243019	20269365	chr22:20243019-20269365	0	-	20243019	20243019	8553170	2	91,367,	0,25979,
#Deleted in new
chr22	20249133	20249211	chr22:20249133-20249211	3	-	20249133	20249133	5263520	1	78,	0,
#Partially deleted in new
chr22	20299759	20313216	chr22:20299759-20313216	7	+	20299759	20299759	16724991	10	273,38,80,82,93,147,176,99,78,174,	0,3509,3961,5076,6705,6919,8026,9530,13129,13283,
#Deleted in new
chr22	20314275	20320080	chr22:20314275-20320080	3	-	20314674	20319988	789624	5	549,141,101,161,202,	0,1060,1843,5363,5603,
#Deleted in new
chr22	20314282	20320009	chr22:20314282-20320009	1	-	20314674	20319988	789624	4	542,141,148,131,	0,1053,5356,5596,
#Deleted in new
chr22	20314393	20320080	chr22:20314393-20320080	0	-	20315453	20319988	789624	4	431,141,161,202,	0,942,5245,5485,
#Deleted in new
chr22	20318118	20318749	chr22:20318118-20318749	3	-	20318118	20318118	8553170	1	631,	0,
#Deleted in new
chr22	20320738	20321203	chr22:20320738-20321203	3	+	20320738	20320738	8553170	1	465,	0,
#Partially deleted in new
chr22	20338804	20354372	chr22:20338804-20354372	3	+	20338804	20338804	8553170	8	212,59,25,87,66,62,34,33,	0,2192,2719,5689,10681,12750,13277,15535,
#Partially deleted in new
chr22	20340995	20352255	chr22:20340995-20352255	1	+	20340995	20340995	789624	6	60,25,87,66,62,174,	0,528,3498,8490,10559,11086,
#Partially deleted in new
chr22	20340996	20354047	chr22:20340996-20354047	1	+	20340996	20340996	8553170	7	59,25,87,66,62,34,1537,	0,527,3497,8489,10558,11085,11514,
#Deleted in new
chr22	20343202	20344365	chr22:20343202-20344365	3	-	20343202	20343202	8553170	2	313,133,	0,1030,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	20350577	20372696	chr22:20350577-20372696	0	-	20350577	20350577	8553170	8	354,50,132,168,96,147,80,161,	0,13047,13608,15989,16970,18851,19542,21958,
#Partially deleted in new
chr22	20363620	20377251	chr22:20363620-20377251	0	-	20363620	20377251	789624	8	54,132,168,96,147,80,146,97,	0,565,2946,3927,5808,6499,11869,13534,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	20363620	20390758	chr22:20363620-20390758	3	-	20363620	20390758	789624	13	54,132,168,96,147,80,146,97,45,8,10,74,20,	0,565,2946,3927,5808,6499,11869,13534,17155,23805,25985,26876,27118,
#Deleted in new
chr22	20363624	20364317	chr22:20363624-20364317	0	-	20363624	20363624	8553170	2	50,132,	0,561,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	20394114	20407678	chr22:20394114-20407678	1	+	20394628	20406968	789624	5	548,86,127,96,2302,	0,1218,6517,7162,11262,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	20394114	20408461	chr22:20394114-20408461	3	+	20394628	20406968	789624	6	220,100,86,127,96,3085,	0,448,1218,6517,7162,11262,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	20394127	20407407	chr22:20394127-20407407	1	+	20394628	20405656	789624	4	535,127,96,2031,	0,6504,7149,11249,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	20394160	20407681	chr22:20394160-20407681	1	+	20394284	20405656	789624	5	174,86,127,96,2305,	0,1172,6471,7116,11216,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	20394187	20407680	chr22:20394187-20407680	0	+	20394187	20394187	8553170	4	1231,127,96,2304,	0,6444,7089,11189,
#Partially deleted in new
chr22	20394188	20405493	chr22:20394188-20405493	0	+	20394628	20405493	789624	2	474,117,	0,11188,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	20394402	20408455	chr22:20394402-20408455	0	+	20394628	20399684	789624	6	260,86,96,127,96,3079,	0,930,5192,6229,6874,10974,
#Partially deleted in new
chr22	20394628	20406968	chr22:20394628-20406968	1	+	20394628	20406968	789624	4	34,86,127,1592,	0,704,6003,10748,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	20399510	20407393	chr22:20399510-20407393	0	+	20399510	20399510	8553170	2	1862,2017,	0,5866,
#Partially deleted in new
chr22	20424814	20437825	chr22:20424814-20437825	1	-	20425374	20437754	789624	11	1468,153,116,118,104,129,219,520,102,59,244,	0,2583,4410,4721,4915,5614,5875,6203,6930,7115,12767,
#Partially deleted in new
chr22	20424814	20437826	chr22:20424814-20437826	3	-	20425374	20437754	789624	11	1468,153,131,118,104,129,219,520,102,59,245,	0,2583,4410,4721,4915,5614,5875,6203,6930,7115,12767,
#Partially deleted in new
chr22	20426086	20429926	chr22:20426086-20429926	0	-	20426086	20426086	8553170	5	196,153,116,118,197,	0,1311,3138,3449,3643,
#Partially deleted in new
chr22	20429240	20446620	chr22:20429240-20446620	3	-	20430539	20446620	789624	5	115,118,104,129,178,	0,295,489,1188,17202,
#Partially deleted in new
chr22	20441518	20495883	chr22:20441518-20495883	3	-	20442072	20489211	789624	7	920,234,193,719,166,260,124,	0,4924,16289,23339,29831,47466,54241,
#Partially deleted in new
chr22	20450121	20451824	chr22:20450121-20451824	7	+	20450121	20450121	16724991	1	1703,	0,
#Partially deleted in new
chr22	20456217	20465486	chr22:20456217-20465486	0	-	20456217	20456217	8553170	3	250,193,153,	0,1590,9116,
#Partially deleted in new
chr22	20457789	20495792	chr22:20457789-20495792	0	-	20457789	20457789	8553170	5	211,719,166,260,33,	0,7068,13560,31195,37970,
#Partially deleted in new
chr22	20465061	20495802	chr22:20465061-20495802	0	-	20465061	20471511	789624	3	515,166,43,	0,6288,30698,
#Partially deleted in new
chr22	20465264	20495795	chr22:20465264-20495795	0	-	20465264	20489211	789624	4	312,166,228,36,	0,6085,23720,30495,
#Partially deleted in new
chr22	20465316	20495795	chr22:20465316-20495795	0	-	20465316	20493216	789624	5	260,166,260,70,36,	0,6033,23668,27831,30443,
#Partially deleted in new
chr22	20465391	20495817	chr22:20465391-20495817	0	-	20465391	20465391	8553170	3	232,260,58,	0,23593,30368,
#Partially deleted in new
chr22	20465541	20495823	chr22:20465541-20495823	0	-	20465541	20489211	789624	4	82,166,260,64,	0,5808,23443,30218,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	20475202	20475311	chr22:20475202-20475311	3	-	20475202	20475202	8553170	1	109,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	20481157	20481268	chr22:20481157-20481268	3	+	20481157	20481157	8553170	1	111,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	20481934	20482213	chr22:20481934-20482213	3	-	20481934	20481934	8553170	1	279,	0,
#Partially deleted in new
chr22	20482814	20484105	chr22:20482814-20484105	7	-	20482814	20482814	16724991	1	1291,	0,
#Partially deleted in new
chr22	20483627	20495844	chr22:20483627-20495844	0	-	20483627	20483627	8553170	3	479,260,85,	0,5357,12132,
#Partially deleted in new
chr22	20488530	20492053	chr22:20488530-20492053	0	-	20488530	20488530	8553170	2	505,203,	0,3320,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	20488984	20491557	chr22:20488984-20491557	0	-	20488984	20489830	789624	3	260,85,424,	0,783,2149,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	20495912	20555135	chr22:20495912-20555135	0	+	20537126	20555135	789624	6	124,96,88,52,30,200,	0,4828,41204,55523,57232,59023,
#Partially deleted in new
chr22	20507540	20564493	chr22:20507540-20564493	0	+	20507678	20554944	789624	4	206,88,213,44,	0,29576,47395,56909,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	20507581	20564500	chr22:20507581-20564500	0	+	20537126	20564500	789624	7	165,118,88,52,30,213,51,	0,11296,29535,43854,45563,47354,56868,
#Partially deleted in new
chr22	20507581	20551748	chr22:20507581-20551748	0	+	20507581	20507581	8553170	3	165,99,313,	0,29535,43854,
#Partially deleted in new
chr22	20507584	20587619	chr22:20507584-20587619	0	+	20507678	20551436	789624	17	162,99,52,30,213,239,351,111,137,128,135,64,67,161,167,99,1052,	0,29532,43851,45560,47351,56865,58882,60936,75026,75255,75528,75745,76774,77270,77516,78143,78983,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	20507593	20564606	chr22:20507593-20564606	0	+	20537126	20564606	789624	6	153,118,88,52,30,157,	0,11284,29523,43842,45551,56856,
#Partially deleted in new
chr22	20507601	20587632	chr22:20507601-20587632	3	+	20507678	20586704	0	17	145,88,52,30,213,239,351,111,137,128,135,64,67,161,167,99,1065,	0,29515,43834,45543,47334,56848,58865,60919,75009,75238,75511,75728,76757,77253,77499,78126,78966,
#Partially deleted in new
chr22	20507609	20587619	chr22:20507609-20587619	1	+	20507678	20586704	0	18	137,88,52,30,213,239,351,111,120,137,128,135,64,67,161,167,99,1052,	0,29507,43826,45535,47326,56840,58857,60911,67503,75001,75230,75503,75720,76749,77245,77491,78118,78958,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	20507611	20564466	chr22:20507611-20564466	0	+	20507611	20507611	8553170	5	135,118,88,213,17,	0,11266,29505,47324,56838,
#Partially deleted in new
chr22	20507617	20587617	chr22:20507617-20587617	1	+	20537126	20586704	789624	17	118,88,52,30,213,239,351,111,137,128,135,64,67,161,167,99,1050,	0,29499,43818,45527,47318,56832,58849,60903,74993,75222,75495,75712,76741,77237,77483,78110,78950,
#Partially deleted in new
chr22	20507640	20586867	chr22:20507640-20586867	1	+	20507678	20586704	0	16	106,88,52,30,239,351,111,137,128,135,64,67,161,167,99,300,	0,29476,43795,45504,56809,58826,60880,74970,75199,75472,75689,76718,77214,77460,78087,78927,
#Duplicated in new
chr22	20508047	20564509	chr22:20508047-20564509	0	+	20508272	20537130	789624	6	397,88,52,30,213,60,	0,29069,43388,45097,46888,56402,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	20508056	20537183	chr22:20508056-20537183	0	+	20508272	20537183	789624	3	388,118,67,	0,10821,29060,
#Partially deleted in new
chr22	20522069	20523870	chr22:20522069-20523870	3	-	20522069	20522069	8553170	3	138,296,218,	0,661,1583,
#Partially deleted in new
chr22	20523642	20555148	chr22:20523642-20555148	0	+	20537126	20555148	789624	5	213,88,52,30,213,	0,13474,27793,29502,31293,
#Partially deleted in new
chr22	20524274	20555091	chr22:20524274-20555091	0	+	20537126	20555091	789624	5	92,88,52,30,156,	0,12842,27161,28870,30661,
#Partially deleted in new
chr22	20524286	20564624	chr22:20524286-20564624	0	+	20524286	20524286	8553170	4	80,88,213,175,	0,12830,30649,40163,
#Partially deleted in new
chr22	20550986	20564597	chr22:20550986-20564597	0	+	20551127	20564597	789624	5	180,52,30,213,148,	0,449,2158,3949,13463,
#Partially deleted in new
chr22	20551006	20564598	chr22:20551006-20564598	0	+	20551332	20564598	789624	4	341,52,30,149,	0,429,2138,13443,
#Partially deleted in new
chr22	20551240	20564636	chr22:20551240-20564636	0	+	20551332	20564636	789624	5	107,52,30,213,187,	0,195,1904,3695,13209,
#Partially deleted in new
chr22	20551289	20566536	chr22:20551289-20566536	0	+	20551289	20566536	789624	7	58,52,30,60,72,239,70,	0,146,1855,3646,3787,13160,15177,
#Partially deleted in new
chr22	20551312	20555077	chr22:20551312-20555077	0	+	20551332	20552582	789624	5	35,52,171,30,142,	0,123,1226,1832,3623,
#Partially deleted in new
chr22	20551406	20566490	chr22:20551406-20566490	0	+	20551406	20551406	8553170	5	81,30,213,239,24,	0,1738,3529,13043,15060,
#Partially deleted in new
chr22	20553096	20566526	chr22:20553096-20566526	0	+	20553096	20553096	8553170	4	78,213,239,60,	0,1839,11353,13370,
#Partially deleted in new
chr22	20554238	20587617	chr22:20554238-20587617	0	+	20554238	20554238	8553170	13	910,239,351,111,137,128,135,64,67,161,167,99,1050,	0,10211,12228,14282,28372,28601,28874,29091,30120,30616,30862,31489,32329,
#Partially deleted in new
chr22	20566464	20583227	chr22:20566464-20583227	0	+	20566464	20566464	8553170	4	353,111,128,115,	0,2056,16375,16648,
#Partially deleted in new
chr22	20573677	20587617	chr22:20573677-20587617	0	+	20573677	20573677	8553170	10	1555,137,128,135,64,67,161,167,99,1050,	0,8933,9162,9435,9652,10681,11177,11423,12050,12890,
#Deleted in new
chr22	20581900	20587632	chr22:20581900-20587632	0	+	20581900	20581900	8553170	9	847,128,135,64,67,161,167,99,1065,	0,939,1212,1429,2458,2954,3200,3827,4667,
#Deleted in new
chr22	20582093	20587617	chr22:20582093-20587617	0	+	20582093	20582093	8553170	3	1154,2497,1050,	0,1236,4474,
#Deleted in new
chr22	20582929	20583749	chr22:20582929-20583749	0	+	20582929	20582929	8553170	3	38,135,420,	0,183,400,
#Deleted in new
chr22	20583337	20585803	chr22:20583337-20585803	0	+	20583337	20583337	8553170	3	56,67,703,	0,1021,1763,
#Deleted in new
chr22	20584945	20585423	chr22:20584945-20585423	0	+	20584945	20584945	8553170	2	70,323,	0,155,
#Deleted in new
chr22	20587495	20592218	chr22:20587495-20592218	7	-	20587495	20587495	16724991	6	251,182,220,179,28,263,	0,333,1311,2335,3383,4460,
#Partially deleted in new
chr22	20602594	20626134	chr22:20602594-20626134	5	-	20602594	20602594	16724991	18	278,129,136,233,204,99,90,146,87,73,133,155,53,103,75,143,87,39,	0,436,1333,1721,2302,3583,4138,4816,8034,11068,13715,18668,18947,19104,19890,20114,21504,23501,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	20616229	20656914	chr22:20616229-20656914	7	-	20616229	20616229	16724991	9	213,53,103,200,143,84,651,610,51,	0,5312,5469,5697,6479,9866,10933,22381,40634,
#Deleted in new
chr22	20632618	20632751	chr22:20632618-20632751	7	+	20632618	20632618	16724991	1	133,	0,
#Deleted in new
chr22	20638360	20639135	chr22:20638360-20639135	4	-	20638360	20638360	16724991	3	71,166,246,	0,250,529,
#Deleted in new
chr22	20652729	20654750	chr22:20652729-20654750	7	+	20652729	20652729	16724991	1	2021,	0,
#Deleted in new
chr22	20667835	20670984	chr22:20667835-20670984	7	-	20667835	20667835	16724991	2	385,524,	0,2625,
#Partially deleted in new
chr22	20689928	20698938	chr22:20689928-20698938	7	+	20689928	20689928	16724991	5	1496,204,63,107,21,	0,4865,6106,6876,8989,
#Deleted in new
chr22	20690030	20691317	chr22:20690030-20691317	4	+	20690030	20690030	16724991	1	1287,	0,
#Partially deleted in new
chr22	20697961	20698934	chr22:20697961-20698934	7	-	20697961	20697961	16724991	2	90,163,	0,810,
#Deleted in new
chr22	20701113	20704606	chr22:20701113-20704606	7	+	20701113	20701113	16724991	8	1193,124,117,57,60,73,41,296,	0,1472,1892,2354,2519,2854,3074,3197,
#Deleted in new
chr22	20702006	20704490	chr22:20702006-20704490	5	+	20702006	20702006	16724991	10	300,124,50,117,57,60,65,73,41,180,	0,579,837,999,1461,1626,1812,1961,2181,2304,
#Deleted in new
chr22	20702311	20704340	chr22:20702311-20704340	4	+	20702311	20702311	16724991	7	149,124,117,57,408,41,30,	0,274,694,1156,1321,1876,1999,
#Deleted in new
chr22	20702676	20704602	chr22:20702676-20704602	4	+	20702676	20702676	16724991	8	33,64,117,57,60,73,41,292,	0,153,329,791,956,1291,1511,1634,
#Deleted in new
chr22	20702840	20704505	chr22:20702840-20704505	4	+	20702840	20702840	16724991	7	53,117,57,119,89,41,195,	0,165,627,792,1127,1347,1470,
#Deleted in new
chr22	20702920	20704606	chr22:20702920-20704606	5	+	20702920	20702920	16724991	6	202,57,119,73,41,296,	0,547,712,1047,1267,1390,
#Deleted in new
chr22	20702972	20704254	chr22:20702972-20704254	4	+	20702972	20702972	16724991	5	150,57,119,73,67,	0,495,660,995,1215,
#Deleted in new
chr22	20702974	20704119	chr22:20702974-20704119	4	+	20702974	20702974	16724991	3	148,119,152,	0,658,993,
#Deleted in new
chr22	20703051	20704606	chr22:20703051-20704606	5	+	20703051	20703051	16724991	7	71,57,60,65,73,41,296,	0,416,581,767,916,1136,1259,
#Deleted in new
chr22	20703094	20704234	chr22:20703094-20704234	4	+	20703094	20703094	16724991	4	28,57,119,267,	0,373,538,873,
#Deleted in new
chr22	20703715	20704558	chr22:20703715-20704558	4	+	20703715	20703715	16724991	3	325,41,248,	0,472,595,
#Partially deleted in new
chr22	20707690	20858812	chr22:20707690-20858812	3	-	20708046	20858725	0	55	408,84,90,160,121,126,105,110,71,73,71,130,121,54,168,91,194,80,120,128,108,152,159,128,157,93,120,90,84,82,125,71,83,134,137,109,51,169,104,184,96,133,130,101,192,97,66,149,67,260,73,89,94,117,243,	0,1605,2217,3008,3650,4795,5002,5590,6767,6937,10017,11002,13607,18797,19539,20083,21622,21941,22201,25280,26045,26352,26704,34537,34917,36937,39892,42214,43602,43983,45212,45419,53613,57126,57409,57894,85502,88455,90893,91402,91980,94282,95500,96609,97283,99671,103276,105667,110792,111950,112848,116635,126871,130924,150879,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	20707692	20722009	chr22:20707692-20722009	0	-	20707692	20707692	8553170	10	406,84,1554,126,698,71,73,71,130,712,	0,1603,2215,4793,5000,6765,6935,10015,11000,13605,
#Partially deleted in new
chr22	20707702	20734667	chr22:20707702-20734667	0	-	20707702	20707702	8553170	23	396,84,90,160,121,126,105,110,71,73,71,130,121,54,168,91,194,80,120,128,108,152,273,	0,1593,2205,2996,3638,4783,4990,5578,6755,6925,10005,10990,13595,18785,19527,20071,21610,21929,22189,25268,26033,26340,26692,
#Partially deleted in new
chr22	20707703	20727357	chr22:20707703-20727357	0	-	20707703	20707703	8553170	13	395,204,1531,126,105,110,71,73,71,130,121,44,128,	0,1592,2204,4782,4989,5577,6754,6924,10004,10989,13594,18794,19526,
#Partially deleted in new
chr22	20707718	20721418	chr22:20707718-20721418	0	-	20708046	20721418	789624	13	380,84,90,160,137,104,105,110,71,73,71,130,121,	0,1577,2189,2980,3622,4789,4974,5562,6739,6909,9989,10974,13579,
#Partially deleted in new
chr22	20710751	20712993	chr22:20710751-20712993	0	-	20710751	20710751	8553170	4	107,121,126,301,	0,589,1734,1941,
#Partially deleted in new
chr22	20711301	20717844	chr22:20711301-20717844	0	-	20711301	20711301	8553170	7	160,126,105,110,71,73,137,	0,1184,1391,1979,3156,3326,6406,
#Deleted in new
chr22	20726315	20727293	chr22:20726315-20727293	0	-	20726315	20726315	8553170	2	226,64,	0,914,
#Deleted in new
chr22	20727568	20729471	chr22:20727568-20729471	0	-	20727568	20727568	8553170	2	296,159,	0,1744,
#Deleted in new
chr22	20733735	20734495	chr22:20733735-20734495	0	-	20733735	20733735	8553170	2	459,101,	0,659,
#Deleted in new
chr22	20734476	20736866	chr22:20734476-20736866	0	-	20734476	20734476	8553170	2	77,458,	0,1932,
#Partially deleted in new
chr22	20734476	20742917	chr22:20734476-20742917	0	-	20734476	20734476	8553170	3	77,128,310,	0,7751,8131,
#Partially deleted in new
chr22	20747483	20751680	chr22:20747483-20751680	0	-	20747483	20747483	8553170	4	219,90,84,7,	0,2421,3809,4190,
#Partially deleted in new
chr22	20753145	20793374	chr22:20753145-20793374	0	-	20753145	20753145	8553170	7	35,83,134,137,109,51,40,	0,8158,11671,11954,12439,40047,40189,
#Partially deleted in new
chr22	20764614	20796158	chr22:20764614-20796158	0	-	20764614	20764614	8553170	5	336,137,109,51,13,	0,485,970,28578,31531,
#Partially deleted in new
chr22	20773878	20787720	chr22:20773878-20787720	3	+	20779312	20787066	0	5	267,905,274,145,846,	0,5418,10093,12125,12996,
#Partially deleted in new
chr22	20779180	20787232	chr22:20779180-20787232	1	+	20779312	20787066	0	4	1021,274,145,358,	0,4791,6823,7694,
#Partially deleted in new
chr22	20798477	20858812	chr22:20798477-20858812	0	-	20798477	20798477	8553170	17	210,184,96,133,130,101,192,97,66,149,67,260,73,89,94,117,243,	0,615,1193,3495,4713,5822,6496,8884,12489,14880,20005,21163,22061,25848,36084,40137,60092,
#Partially deleted in new
chr22	20798939	20802018	chr22:20798939-20802018	0	-	20798939	20798939	8553170	3	337,96,46,	0,731,3033,
#Partially deleted in new
chr22	20824346	20859417	chr22:20824346-20859417	0	-	20824346	20838713	789624	4	68,94,117,295,	0,10215,14268,34776,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	20858982	20891218	chr22:20858982-20891218	3	+	20859110	20887836	0	5	365,197,86,99,3540,	0,11354,22066,24488,28696,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	20859080	20871041	chr22:20859080-20871041	0	+	20859080	20859080	8553170	2	267,705,	0,11256,
#Partially deleted in new
chr22	20859482	20887819	chr22:20859482-20887819	0	+	20870378	20887819	789624	5	158,197,86,99,141,	0,10854,21566,23988,28196,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	20889205	20891214	chr22:20889205-20891214	3	-	20889205	20889205	8553170	2	58,315,	0,1694,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	20917425	20953749	chr22:20917425-20953749	3	+	20917934	20949845	0	3	820,466,4039,	0,16353,32285,
#Partially deleted in new
chr22	20917433	20953747	chr22:20917433-20953747	0	+	20917934	20949845	0	4	812,466,217,542,	0,16345,32277,35772,
#Partially deleted in new
chr22	20957091	20964679	chr22:20957091-20964679	3	+	20957091	20957091	789624	2	395,289,	0,7299,
#Partially deleted in new
chr22	20965107	20981360	chr22:20965107-20981360	3	+	20967944	20981031	789624	21	100,171,214,110,110,45,97,113,87,92,131,116,72,64,77,118,99,76,105,21,369,	0,2697,8199,8650,8955,9144,9417,9596,10584,11107,11300,11543,11759,11924,12592,12780,14163,14519,14912,15639,15884,
#Partially deleted in new
chr22	20965162	20981358	chr22:20965162-20981358	1	+	20967944	20981031	789624	20	45,171,214,110,110,45,97,113,87,92,131,116,72,64,77,118,99,76,105,367,	0,2642,8144,8595,8900,9089,9362,9541,10529,11052,11245,11488,11704,11869,12537,12725,14108,14464,14857,15829,
#Partially deleted in new
chr22	20965166	20974814	chr22:20965166-20974814	0	+	20967944	20974262	789624	7	41,171,214,110,45,97,111,	0,2638,8140,8896,9085,9358,9537,
#Partially deleted in new
chr22	20965171	20974096	chr22:20965171-20974096	0	+	20967944	20974096	789624	6	36,41,171,214,110,34,	0,1334,2633,8135,8586,8891,
#Partially deleted in new
chr22	20965171	20973645	chr22:20965171-20973645	0	+	20965171	20965171	8553170	3	36,171,339,	0,2633,8135,
#Partially deleted in new
chr22	20965176	20973619	chr22:20965176-20973619	0	+	20965176	20965176	8553170	4	31,41,171,313,	0,1329,2628,8130,
#Deleted in new
chr22	20965176	20967036	chr22:20965176-20967036	0	+	20965176	20965176	8553170	2	31,531,	0,1329,
#Deleted in new
chr22	20965267	20966798	chr22:20965267-20966798	0	+	20965267	20965267	8553170	2	208,293,	0,1238,
#Partially deleted in new
chr22	20967158	20975778	chr22:20967158-20975778	0	+	20967944	20975778	789624	9	145,171,214,110,110,45,97,113,87,	0,646,6148,6599,6904,7093,7366,7545,8533,
#Partially deleted in new
chr22	20967247	20974096	chr22:20967247-20974096	0	+	20967944	20973801	789624	5	56,171,150,110,34,	0,557,6123,6510,6815,
#Partially deleted in new
chr22	20967248	20974297	chr22:20967248-20974297	0	+	20967248	20967248	8553170	5	55,171,214,110,46,	0,556,6058,6814,7003,
#Partially deleted in new
chr22	20967254	20981360	chr22:20967254-20981360	1	+	20967944	20981031	789624	20	49,171,232,110,110,45,97,113,87,92,131,116,72,64,77,118,99,76,105,369,	0,550,6034,6503,6808,6997,7270,7449,8437,8960,9153,9396,9612,9777,10445,10633,12016,12372,12765,13737,
#Partially deleted in new
chr22	20967254	20973678	chr22:20967254-20973678	0	+	20967254	20967254	8553170	3	49,171,372,	0,550,6052,
#Partially deleted in new
chr22	20967262	20974267	chr22:20967262-20974267	0	+	20967262	20967262	8553170	5	41,183,214,110,16,	0,530,6044,6800,6989,
#Partially deleted in new
chr22	20967723	20981360	chr22:20967723-20981360	1	+	20967944	20981031	789624	20	252,214,110,110,45,97,113,87,92,131,116,72,64,77,118,99,76,105,21,369,	0,5583,6034,6339,6528,6801,6980,7968,8491,8684,8927,9143,9308,9976,10164,11547,11903,12296,13023,13268,
#Partially deleted in new
chr22	20974512	20981348	chr22:20974512-20981348	0	+	20974512	20974512	8553170	14	109,89,87,92,131,116,72,64,77,118,99,76,105,357,	0,215,1179,1702,1895,2138,2354,2519,3187,3375,4758,5114,5507,6479,
#Deleted in new
chr22	20975691	20981356	chr22:20975691-20981356	0	+	20975691	20975691	8553170	11	87,92,131,116,72,64,118,99,76,105,365,	0,523,716,959,1175,1340,2196,3579,3935,4328,5300,
#Deleted in new
chr22	20976872	20981355	chr22:20976872-20981355	0	+	20976872	20976872	8553170	4	904,118,99,1729,	0,1015,2398,2754,
#Partially deleted in new
chr22	20979461	20998121	chr22:20979461-20998121	3	+	20979461	20979461	8553170	22	241,105,63,57,80,109,84,58,140,202,156,111,93,96,166,170,157,127,150,106,81,890,	0,558,3565,6379,8042,8548,9327,10163,10924,12166,12752,13332,14200,14462,14642,15096,15408,16284,16501,17234,17424,17770,
#Deleted in new
chr22	20981360	20981755	chr22:20981360-20981755	3	-	20981360	20981360	8553170	1	395,	0,
#Partially deleted in new
chr22	20982012	20999038	chr22:20982012-20999038	3	+	20982371	20997348	789624	21	559,63,57,80,109,84,58,140,202,156,111,93,96,166,170,157,127,150,106,81,1807,	0,1014,3828,5491,5997,6776,7612,8373,9615,10201,10781,11649,11911,12091,12545,12857,13733,13950,14683,14873,15219,
#Partially deleted in new
chr22	20982268	20991685	chr22:20982268-20991685	0	+	20982371	20988043	789624	8	303,63,57,109,84,58,140,58,	0,758,3572,5741,6520,7356,8117,9359,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	20982296	20987162	chr22:20982296-20987162	0	+	20982296	20982296	8553170	3	275,63,1322,	0,730,3544,
#Partially deleted in new
chr22	20982297	20999032	chr22:20982297-20999032	1	+	20982371	20997348	789624	21	274,63,57,80,109,84,58,140,202,156,111,93,96,166,170,157,127,150,106,81,1801,	0,729,3543,5206,5712,6491,7327,8088,9330,9916,10496,11364,11626,11806,12260,12572,13448,13665,14398,14588,14934,
#Partially deleted in new
chr22	20982322	20989675	chr22:20982322-20989675	0	+	20982371	20985878	789624	7	254,63,57,80,109,84,51,	0,704,3518,5181,5687,6466,7302,
#Partially deleted in new
chr22	20982330	20988113	chr22:20982330-20988113	0	+	20982371	20988113	789624	4	241,63,80,104,	0,696,5173,5679,
#Partially deleted in new
chr22	20982465	20990474	chr22:20982465-20990474	0	+	20982465	20990474	789624	7	106,63,57,80,109,58,89,	0,561,3375,5038,5544,7159,7920,
#Partially deleted in new
chr22	20982493	20998659	chr22:20982493-20998659	0	+	20982493	20983093	789624	20	78,96,57,109,84,58,140,202,156,111,93,96,166,170,157,127,150,106,81,1428,	0,533,3347,5516,6295,7131,7892,9134,9720,10300,11168,11430,11610,12064,12376,13252,13469,14202,14392,14738,
#Partially deleted in new
chr22	20986078	20991679	chr22:20986078-20991679	0	+	20986078	20986078	8553170	6	96,109,84,58,140,52,	0,1931,2710,3546,4307,5549,
#Partially deleted in new
chr22	20988030	20999016	chr22:20988030-20999016	0	+	20988030	20988030	8553170	16	88,84,58,140,202,156,111,93,96,624,157,127,150,106,81,1785,	0,758,1594,2355,3597,4183,4763,5631,5893,6073,6839,7715,7932,8665,8855,9201,
#Deleted in new
chr22	20989648	20992848	chr22:20989648-20992848	0	+	20989648	20990488	789624	5	34,584,202,156,55,	0,737,1979,2565,3145,
#Deleted in new
chr22	20990814	20999016	chr22:20990814-20999016	0	+	20990814	20990814	8553170	13	1015,156,111,93,96,166,170,157,127,150,106,81,1785,	0,1399,1979,2847,3109,3289,3743,4055,4931,5148,5881,6071,6417,
#Deleted in new
chr22	20991491	20998972	chr22:20991491-20998972	0	+	20991491	20991491	8553170	11	338,156,111,93,96,624,1003,150,106,81,1741,	0,722,1302,2170,2432,2612,3378,4471,5204,5394,5740,
#Deleted in new
chr22	20991735	20992532	chr22:20991735-20992532	0	+	20991735	20991735	8553170	2	94,319,	0,478,
#Deleted in new
chr22	20991780	20994300	chr22:20991780-20994300	0	+	20991780	20991780	8553170	6	49,156,104,93,96,197,	0,433,1013,1881,2143,2323,
#Deleted in new
chr22	20993347	20998821	chr22:20993347-20998821	0	+	20993347	20993347	8553170	11	121,93,96,166,170,157,127,150,106,81,1590,	0,314,576,756,1210,1522,2398,2615,3348,3538,3884,
#Deleted in new
chr22	20994226	20996112	chr22:20994226-20996112	0	+	20994226	20995407	789624	6	43,54,157,117,127,150,	0,447,643,1141,1519,1736,
#Deleted in new
chr22	20994476	20995999	chr22:20994476-20995999	0	+	20994476	20994476	8553170	4	251,112,127,37,	0,438,1269,1486,
#Deleted in new
chr22	20994585	20998924	chr22:20994585-20998924	0	+	20994585	20995477	789624	8	142,112,117,127,150,106,81,1693,	0,329,782,1160,1377,2110,2300,2646,
#Deleted in new
chr22	20994660	20996712	chr22:20994660-20996712	0	+	20994660	20995477	789624	6	67,157,117,127,150,17,	0,209,707,1085,1302,2035,
#Deleted in new
chr22	20994905	20997541	chr22:20994905-20997541	0	+	20994905	20995806	789624	6	121,110,150,106,81,310,	0,857,1057,1790,1980,2326,
#Deleted in new
chr22	20995088	20999032	chr22:20995088-20999032	0	+	20995088	20995088	8553170	4	784,839,81,1801,	0,874,1797,2143,
#Deleted in new
chr22	20995787	20997769	chr22:20995787-20997769	0	+	20995787	20995787	8553170	4	85,150,271,538,	0,175,908,1444,
#Deleted in new
chr22	20999103	21001742	chr22:20999103-21001742	0	-	20999103	20999103	8553170	3	1329,141,487,	0,1543,2152,
#Deleted in new
chr22	20999771	21002086	chr22:20999771-21002086	1	-	20999879	21001911	789624	4	661,141,156,255,	0,875,1484,2060,
#Deleted in new
chr22	20999772	21001795	chr22:20999772-21001795	0	-	20999772	20999772	8553170	2	660,1149,	0,874,
#Deleted in new
chr22	20999776	21002196	chr22:20999776-21002196	3	-	20999879	21001911	789624	5	656,141,156,80,111,	0,870,1479,2055,2309,
#Deleted in new
chr22	20999801	21002106	chr22:20999801-21002106	0	-	20999801	20999801	8553170	3	631,765,275,	0,845,2030,
#Deleted in new
chr22	21000229	21002117	chr22:21000229-21002117	0	-	21000229	21000229	8553170	4	203,765,80,32,	0,417,1602,1856,
#Deleted in new
chr22	21000271	21001518	chr22:21000271-21001518	0	-	21000271	21000271	8553170	3	161,83,263,	0,375,984,
#Deleted in new
chr22	21001291	21002118	chr22:21001291-21002118	0	-	21001291	21001291	8553170	2	620,33,	0,794,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	21001885	21010125	chr22:21001885-21010125	0	+	21001885	21001885	8553170	2	944,776,	0,7464,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	21001921	21003272	chr22:21001921-21003272	0	+	21001921	21001921	789624	2	908,355,	0,996,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	21002207	21010342	chr22:21002207-21010342	3	+	21002207	21002207	789624	2	622,1676,	0,6459,
#Partially deleted in new
chr22	21002894	21009453	chr22:21002894-21009453	7	-	21002894	21002894	16724991	2	283,675,	0,5884,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	21008192	21014287	chr22:21008192-21014287	3	-	21008192	21008192	789624	3	1261,207,506,	0,3191,5589,
#Partially deleted in new
chr22	21008636	21014292	chr22:21008636-21014292	0	-	21008636	21008636	8553170	4	817,207,143,511,	0,2747,4405,5145,
#Partially deleted in new
chr22	21009807	21017942	chr22:21009807-21017942	0	+	21009807	21009807	8553170	3	69,151,22,	0,6134,8113,
#Partially deleted in new
chr22	21011383	21014217	chr22:21011383-21014217	7	-	21011383	21011383	16724991	4	207,132,143,139,	0,1143,1658,2695,
#Partially deleted in new
chr22	21015026	21028830	chr22:21015026-21028830	3	+	21015174	21026617	789624	12	312,151,72,76,94,81,142,110,94,66,78,2411,	0,915,2962,7649,7915,8091,8248,8482,10778,10984,11225,11393,
#Partially deleted in new
chr22	21015152	21028008	chr22:21015152-21028008	0	+	21015174	21022947	789624	10	108,151,94,81,142,110,94,66,78,1589,	0,789,7789,7965,8122,8356,10652,10858,11099,11267,
#Partially deleted in new
chr22	21015169	21027198	chr22:21015169-21027198	1	+	21015174	21026617	789624	12	91,151,72,76,94,81,142,110,94,66,78,779,	0,772,2819,7506,7772,7948,8105,8339,10635,10841,11082,11250,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	21015174	21018791	chr22:21015174-21018791	0	+	21015174	21015174	8553170	3	164,151,871,	0,767,2746,
#Partially deleted in new
chr22	21015182	21023152	chr22:21015182-21023152	0	+	21015182	21017974	789624	5	156,151,140,94,35,	0,759,2738,7759,7935,
#Partially deleted in new
chr22	21015186	21028008	chr22:21015186-21028008	0	+	21015186	21022698	789624	13	147,151,72,76,94,81,142,110,94,66,78,538,501,	0,755,2802,7489,7755,7931,8088,8322,10618,10824,11065,11233,12321,
#Partially deleted in new
chr22	21015189	21028013	chr22:21015189-21028013	0	+	21015189	21022947	789624	11	149,151,94,81,142,110,94,66,78,538,506,	0,752,7752,7928,8085,8319,10615,10821,11062,11230,12318,
#Partially deleted in new
chr22	21023348	21026597	chr22:21023348-21026597	0	+	21023348	21023348	8553170	5	68,110,94,319,178,	0,160,2456,2662,3071,
#Deleted in new
chr22	21028717	21032558	chr22:21028717-21032558	3	-	21029054	21031812	789624	5	513,109,641,1022,28,	0,618,993,2113,3813,
#Deleted in new
chr22	21028717	21032549	chr22:21028717-21032549	1	-	21029054	21031812	789624	5	513,109,641,1025,19,	0,618,993,2113,3813,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	21031356	21043969	chr22:21031356-21043969	3	+	21031356	21031356	8553170	3	147,353,63,	0,11346,12550,
#Deleted in new
chr22	21031567	21032840	chr22:21031567-21032840	0	-	21031567	21031812	789624	2	285,131,	0,1142,
#Deleted in new
chr22	21034175	21034272	chr22:21034175-21034272	3	-	21034175	21034175	5263520	1	97,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	21035242	21045012	chr22:21035242-21045012	7	-	21035242	21035242	16724991	4	194,72,151,51,	0,7100,8906,9719,
#Partially deleted in new
chr22	21042342	21045017	chr22:21042342-21045017	5	-	21042342	21042342	16724991	3	72,151,134,	0,1806,2541,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	21045959	21064168	chr22:21045959-21064168	0	+	21045959	21045959	789624	9	166,143,1274,110,116,79,265,205,2445,	0,1396,1924,6289,7400,9138,10976,14413,15764,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr22	21045980	21062276	chr22:21045980-21062276	0	+	21045980	21045980	789624	11	145,143,1274,143,110,116,190,79,265,205,553,	0,1375,1903,3333,6268,7379,7827,9117,10955,14392,15743,
#Partially deleted in new
chr22	21045986	21060528	chr22:21045986-21060528	3	+	21045986	21060528	789624	9	139,143,133,207,110,116,79,96,156,	0,1369,1897,2964,6262,7373,9111,11118,14386,
#Partially deleted in new
chr22	21056529	21060397	chr22:21056529-21060397	0	+	21056529	21056529	8553170	2	671,25,	0,3843,
#Partially deleted in new
chr22	21065461	21070097	chr22:21065461-21070097	7	+	21065461	21065461	16724991	4	225,142,661,297,	0,1489,1954,4339,
#Partially deleted in new
chr22	21071081	21081018	chr22:21071081-21081018	7	-	21071081	21071081	16724991	2	134,138,	0,9799,
#Partially deleted in new
chr22	21103015	21121784	chr22:21103015-21121784	7	+	21103015	21103015	16724991	6	211,73,135,269,163,981,	0,12913,14108,15025,15771,17788,
#Deleted in new
chr22	21114489	21117524	chr22:21114489-21117524	4	+	21114489	21114489	16724991	1	3035,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	21114606	21124451	chr22:21114606-21124451	3	-	21114606	21114606	8553170	6	1581,915,129,107,376,1725,	0,2473,4045,6207,7369,8120,
#Partially deleted in new
chr22	21115928	21119758	chr22:21115928-21119758	5	+	21115928	21115928	16724991	5	140,135,106,163,90,	0,1195,2275,2858,3740,
#Partially deleted in new
chr22	21118589	21122285	chr22:21118589-21122285	5	+	21118589	21118589	16724991	2	360,1482,	0,2214,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	21125659	21128063	chr22:21125659-21128063	7	-	21125659	21125659	16724991	1	2404,	0,
#Deleted in new
chr22	21141623	21142371	chr22:21141623-21142371	7	-	21141623	21141623	16724991	1	748,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	21167757	21192156	chr22:21167757-21192156	1	+	21167757	21167757	789624	12	212,59,25,87,66,62,34,2317,73,41,155,435,	0,2188,2715,5686,10673,12738,13265,15513,18363,18662,19165,23964,
#Partially deleted in new
chr22	21167828	21192149	chr22:21167828-21192149	1	+	21167828	21167828	8553170	9	141,59,25,87,66,62,34,957,428,	0,2117,2644,5615,10602,12667,13194,18292,23893,
#Partially deleted in new
chr22	21167852	21173530	chr22:21167852-21173530	1	+	21167852	21167852	8553170	4	117,59,133,87,	0,2093,2620,5591,
#Partially deleted in new
chr22	21167852	21170852	chr22:21167852-21170852	0	+	21167852	21167852	8553170	3	117,59,380,	0,2093,2620,
#Partially deleted in new
chr22	21167884	21183322	chr22:21167884-21183322	1	+	21167884	21167884	8553170	9	85,59,25,128,87,66,62,34,52,	0,2061,2588,3196,5559,10546,12611,13138,15386,
#Partially deleted in new
chr22	21169812	21181056	chr22:21169812-21181056	0	+	21169812	21169812	8553170	6	192,25,87,66,62,34,	0,660,3631,8618,10683,11210,
#Deleted in new
chr22	21169864	21170655	chr22:21169864-21170655	0	+	21169864	21169864	8553170	2	140,183,	0,608,
#Partially deleted in new
chr22	21169945	21182974	chr22:21169945-21182974	3	+	21169945	21169945	8553170	7	59,25,87,66,62,34,1523,	0,527,3498,8485,10550,11077,11506,
#Partially deleted in new
chr22	21177891	21179875	chr22:21177891-21179875	3	-	21177891	21177891	8553170	2	658,116,	0,1868,
#Partially deleted in new
chr22	21193359	21203755	chr22:21193359-21203755	7	-	21193359	21193359	16724991	2	56,302,	0,10094,
#Deleted in new
chr22	21203453	21203631	chr22:21203453-21203631	5	-	21203453	21203453	16724991	1	178,	0,
#Partially deleted in new
chr22	21207972	21225554	chr22:21207972-21225554	1	-	21208137	21225554	789624	12	312,114,113,98,188,137,150,154,197,87,131,164,	0,616,811,1026,1386,5092,5752,7952,8498,13893,14111,17418,
#Partially deleted in new
chr22	21207973	21227637	chr22:21207973-21227637	3	-	21208137	21225554	789624	15	311,114,113,128,188,137,150,154,197,87,131,171,174,69,242,	0,615,810,1025,1385,5091,5751,7951,8497,13892,14110,17417,18131,18620,19422,
#Deleted in new
chr22	21228759	21229138	chr22:21228759-21229138	7	-	21228759	21228759	16724991	1	379,	0,
#Deleted in new
chr22	21268160	21268903	chr22:21268160-21268903	7	+	21268160	21268160	16724991	1	743,	0,
#Partially deleted in new
chr22	21282880	21284161	chr22:21282880-21284161	7	+	21282880	21282880	16724991	1	1281,	0,
#Partially deleted in new
chr22	21290759	21294586	chr22:21290759-21294586	7	-	21290759	21290759	16724991	5	87,163,106,136,140,	0,806,1446,2497,3687,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	21300989	21325042	chr22:21300989-21325042	3	-	21300989	21300989	789624	12	435,155,41,73,1966,34,62,66,87,25,59,212,	0,5079,5696,5963,6569,10750,11249,13310,18280,21313,21806,23841,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	21300990	21309881	chr22:21300990-21309881	1	-	21300990	21300990	8553170	3	434,957,2323,	0,5078,6568,
#Partially deleted in new
chr22	21300996	21325042	chr22:21300996-21325042	1	-	21300996	21300996	8553170	9	428,957,34,62,66,87,25,59,212,	0,5072,10743,11242,13303,18273,21306,21799,23834,
#Partially deleted in new
chr22	21309820	21322854	chr22:21309820-21322854	0	-	21309820	21309820	8553170	7	1524,34,62,66,87,25,59,	0,1919,2418,4479,9449,12482,12975,
#Partially deleted in new
chr22	21311739	21325042	chr22:21311739-21325042	0	-	21311739	21311739	8553170	8	34,62,66,87,128,25,59,212,	0,499,2560,7530,9852,10563,11056,13091,
#Partially deleted in new
chr22	21311739	21324937	chr22:21311739-21324937	0	-	21311739	21311739	8553170	7	34,62,66,87,25,189,107,	0,499,2560,7530,10563,11056,13091,
#Partially deleted in new
chr22	21312919	21314904	chr22:21312919-21314904	3	+	21312919	21312919	8553170	2	117,658,	0,1327,
#Partially deleted in new
chr22	21319269	21324967	chr22:21319269-21324967	0	-	21319269	21319269	8553170	4	87,133,59,137,	0,2925,3526,5561,
#Partially deleted in new
chr22	21321947	21324967	chr22:21321947-21324967	1	-	21321947	21321947	8553170	3	380,59,137,	0,848,2883,
#Deleted in new
chr22	21322140	21322935	chr22:21322140-21322935	0	-	21322140	21322140	8553170	2	187,140,	0,655,
#Deleted in new
chr22	21341594	21345258	chr22:21341594-21345258	7	+	21341594	21341594	16724991	1	3664,	0,
#Partially deleted in new
chr22	21354562	21355763	chr22:21354562-21355763	3	+	21354562	21354562	8553170	2	287,63,	0,1138,
#Deleted in new
chr22	21370063	21371945	chr22:21370063-21371945	7	+	21370063	21370063	16724991	4	211,145,164,169,	0,452,1085,1713,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	21379381	21379701	chr22:21379381-21379701	3	-	21379381	21379381	8553170	1	320,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	21383373	21389478	chr22:21383373-21389478	3	+	21383858	21388778	789624	1	6105,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	21389190	21389491	chr22:21389190-21389491	3	+	21389190	21389190	8553170	1	301,	0,
#Partially deleted in new
chr22	21389795	21389938	chr22:21389795-21389938	3	-	21389795	21389795	8553170	1	143,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	21396272	21396590	chr22:21396272-21396590	3	-	21396272	21396272	8553170	1	318,	0,
#Partially deleted in new
chr22	21417403	21451463	chr22:21417403-21451463	3	+	21442831	21446743	789624	3	157,99,6542,	0,25355,27518,
#Partially deleted in new
chr22	21420635	21449434	chr22:21420635-21449434	1	+	21442831	21446743	789624	3	122,99,4513,	0,22123,24286,
#Deleted in new
chr22	21442459	21451463	chr22:21442459-21451463	1	+	21442831	21446743	789624	2	398,6542,	0,2462,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	21463962	21464279	chr22:21463962-21464279	3	+	21463962	21463962	8553170	1	317,	0,
#Partially deleted in new
chr22	21466422	21469935	chr22:21466422-21469935	0	+	21467318	21468353	789624	8	1192,124,117,57,60,73,41,294,	0,1471,1892,2356,2521,2851,3071,3219,
#Partially deleted in new
chr22	21466449	21467023	chr22:21466449-21467023	1	+	21466493	21466976	789624	1	574,	0,
#Partially deleted in new
chr22	21467139	21469935	chr22:21467139-21469935	3	+	21467318	21469821	789624	9	475,124,51,78,57,119,73,41,319,	0,754,1012,1214,1639,1804,2134,2354,2477,
#Partially deleted in new
chr22	21467261	21469933	chr22:21467261-21469933	0	+	21467261	21467261	8553170	5	353,538,57,403,440,	0,632,1517,1682,2232,
#Partially deleted in new
chr22	21467318	21469925	chr22:21467318-21469925	1	+	21467318	21469651	789624	10	296,124,51,78,57,60,65,73,41,284,	0,575,833,1035,1460,1625,1811,1955,2175,2323,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	21467390	21471269	chr22:21467390-21471269	0	+	21467390	21467390	8553170	8	224,309,117,57,119,73,41,1653,	0,503,924,1388,1553,1883,2103,2226,
#Partially deleted in new
chr22	21467391	21469933	chr22:21467391-21469933	0	+	21467391	21467391	8553170	7	377,538,57,119,73,41,317,	0,502,1387,1552,1882,2102,2225,
#Partially deleted in new
chr22	21467464	21469925	chr22:21467464-21469925	0	+	21467464	21468353	789624	10	150,124,51,117,57,60,65,73,41,284,	0,429,687,850,1314,1479,1665,1809,2029,2177,
#Partially deleted in new
chr22	21467619	21469267	chr22:21467619-21469267	0	+	21467619	21467619	8553170	5	149,124,117,57,324,	0,274,695,1159,1324,
#Partially deleted in new
chr22	21468097	21469925	chr22:21468097-21469925	0	+	21468097	21468097	8553170	8	105,78,57,60,65,73,41,284,	0,256,681,846,1032,1176,1396,1544,
#Partially deleted in new
chr22	21468287	21469919	chr22:21468287-21469919	0	+	21468287	21468287	8553170	5	144,57,119,261,303,	0,491,656,986,1329,
#Partially deleted in new
chr22	21468746	21469935	chr22:21468746-21469935	0	+	21468746	21468746	8553170	4	89,119,261,319,	0,197,527,870,
#Partially deleted in new
chr22	21468755	21469717	chr22:21468755-21469717	0	+	21468755	21468755	8553170	4	80,119,73,224,	0,188,518,738,
#Partially deleted in new
chr22	21469147	21469935	chr22:21469147-21469935	1	+	21469147	21469821	789624	4	47,73,41,319,	0,126,346,469,
#Partially deleted in new
chr22	21472999	21484134	chr22:21472999-21484134	5	-	21472999	21472999	16724991	9	406,84,1554,126,698,71,73,71,130,	0,1597,2211,4790,4997,6759,6930,10020,11005,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	21473008	21477143	chr22:21473008-21477143	4	-	21473008	21473008	16724991	3	397,84,1933,	0,1588,2202,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	21473008	21477217	chr22:21473008-21477217	4	-	21473008	21473008	16724991	4	397,84,90,1216,	0,1588,2202,2993,
#Partially deleted in new
chr22	21473010	21484134	chr22:21473010-21484134	4	-	21473010	21473010	16724991	10	395,204,1531,126,105,110,71,73,71,130,	0,1586,2200,4779,4986,5574,6748,6919,10009,10994,
#Partially deleted in new
chr22	21473022	21488382	chr22:21473022-21488382	4	-	21473022	21473022	16724991	15	383,84,90,763,126,105,110,71,73,71,130,128,108,152,159,	0,1574,2188,2979,4767,4974,5562,6736,6907,9997,10982,13777,14542,14849,15201,
#Partially deleted in new
chr22	21473034	21517533	chr22:21473034-21517533	5	-	21473034	21473034	16724991	17	371,84,90,159,126,105,110,71,73,71,130,176,108,152,158,101,209,	0,1562,2176,2967,4755,4962,5550,6724,6895,9985,10970,13765,14530,14837,15189,18959,44290,
#Partially deleted in new
chr22	21473058	21488358	chr22:21473058-21488358	7	-	21473058	21473058	16724991	16	347,84,90,169,121,126,165,110,71,73,71,130,128,108,152,135,	0,1538,2152,2933,3585,4731,4938,5526,6700,6871,9961,10946,13741,14506,14813,15165,
#Partially deleted in new
chr22	21473075	21487907	chr22:21473075-21487907	4	-	21473075	21473075	16724991	14	330,84,90,763,126,105,110,71,73,71,130,176,108,36,	0,1521,2135,2926,4714,4921,5509,6683,6854,9944,10929,13724,14489,14796,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	21477379	21514255	chr22:21477379-21514255	4	-	21477379	21477379	16724991	13	536,105,110,71,73,71,130,128,108,152,158,101,126,	0,617,1205,2379,2550,5640,6625,9420,10185,10492,10844,14614,36750,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr22	21477379	21490611	chr22:21477379-21490611	4	-	21477379	21477379	16724991	11	536,105,110,71,73,71,130,128,108,152,2388,	0,617,1205,2379,2550,5640,6625,9420,10185,10492,10844,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	21477412	21517520	chr22:21477412-21517520	4	-	21477412	21477412	16724991	13	503,105,110,71,73,71,130,128,108,152,158,101,196,	0,584,1172,2346,2517,5607,6592,9387,10152,10459,10811,14581,39912,
#Partially deleted in new
chr22	21491975	21517481	chr22:21491975-21517481	4	-	21491975	21491975	16724991	2	119,157,	0,25349,
#Partially deleted in new
chr22	21491975	21514223	chr22:21491975-21514223	4	-	21491975	21491975	16724991	2	119,90,	0,22158,
#Deleted in new
chr22	21544896	21545039	chr22:21544896-21545039	3	+	21544896	21544896	8553170	1	143,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	21545343	21545644	chr22:21545343-21545644	3	-	21545343	21545343	8553170	1	301,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	21545356	21550831	chr22:21545356-21550831	1	-	21546056	21550694	789624	1	5475,	0,
#Deleted in new
chr22	21545677	21551461	chr22:21545677-21551461	3	-	21546056	21550976	789624	1	5784,	0,
#Partially deleted in new
chr22	21549446	21624034	chr22:21549446-21624034	1	+	21549449	21621669	0	4	204,96,187,2520,	0,43414,61410,72068,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	21555137	21555457	chr22:21555137-21555457	3	+	21555137	21555137	8553170	1	320,	0,
#Partially deleted in new
chr22	21567546	21624034	chr22:21567546-21624034	3	+	21567744	21621669	0	4	225,96,187,2520,	0,25314,43310,53968,
#Partially deleted in new
chr22	21567546	21624034	chr22:21567546-21624034	1	+	21567744	21621669	0	3	225,187,2520,	0,43310,53968,
#Partially deleted in new
chr22	21567729	21624034	chr22:21567729-21624034	0	+	21567729	21567729	789624	4	648,96,187,2520,	0,25131,43127,53785,
#Deleted in new
chr22	21628088	21630064	chr22:21628088-21630064	3	-	21628417	21630014	789624	5	699,178,100,160,214,	0,921,1219,1513,1762,
#Deleted in new
chr22	21628088	21630064	chr22:21628088-21630064	0	-	21629379	21630014	789624	5	699,178,100,219,214,	0,921,1219,1454,1762,
#Deleted in new
chr22	21628088	21630012	chr22:21628088-21630012	0	-	21628088	21628088	8553170	3	699,752,162,	0,921,1762,
#Deleted in new
chr22	21628088	21630031	chr22:21628088-21630031	0	-	21628088	21628088	8553170	2	699,724,	0,1219,
#Deleted in new
chr22	21628113	21630038	chr22:21628113-21630038	0	-	21628113	21628113	8553170	4	674,178,454,188,	0,896,1194,1737,
#Deleted in new
chr22	21628121	21630014	chr22:21628121-21630014	0	-	21628121	21628121	8553170	4	666,398,160,164,	0,888,1480,1729,
#Deleted in new
chr22	21628166	21630035	chr22:21628166-21630035	1	-	21628761	21630014	789624	4	621,100,160,185,	0,1141,1435,1684,
#Deleted in new
chr22	21632715	21635802	chr22:21632715-21635802	1	+	21633181	21635644	789624	4	112,134,549,1118,	0,404,1306,1969,
#Deleted in new
chr22	21632717	21634209	chr22:21632717-21634209	0	+	21632983	21634209	789624	3	110,274,188,	0,262,1304,
#Deleted in new
chr22	21632728	21637327	chr22:21632728-21637327	3	+	21633181	21637070	789624	5	99,134,549,582,896,	0,391,1293,1956,3703,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	21640843	21641284	chr22:21640843-21641284	3	+	21640843	21640843	8553170	1	441,	0,
#Deleted in new
chr22	21642260	21644298	chr22:21642260-21644298	3	+	21642336	21644175	789624	3	263,197,405,	0,601,1633,
#Deleted in new
chr22	21642353	21643292	chr22:21642353-21643292	0	+	21642353	21642353	8553170	2	170,431,	0,508,
#Partially deleted in new
chr22	21652269	21670237	chr22:21652269-21670237	3	+	21652269	21652269	8553170	7	62,125,155,197,44,185,325,	0,1072,1743,5996,6373,8567,17643,
#Deleted in new
chr22	21652980	21653058	chr22:21652980-21653058	3	+	21652980	21652980	5263520	1	78,	0,
#Deleted in new
chr22	21653303	21653385	chr22:21653303-21653385	3	+	21653303	21653303	5263520	1	82,	0,
#Partially deleted in new
chr22	21657810	21661021	chr22:21657810-21661021	7	+	21657810	21657810	16724991	3	162,124,185,	0,455,3026,
#Deleted in new
chr22	21661241	21661295	chr22:21661241-21661295	7	-	21661241	21661241	16724991	1	54,	0,
#Deleted in new
chr22	21661475	21661593	chr22:21661475-21661593	7	-	21661475	21661475	16724991	1	118,	0,
#Deleted in new
chr22	21661858	21661929	chr22:21661858-21661929	7	-	21661858	21661858	16724991	1	71,	0,
#Deleted in new
chr22	21661933	21662363	chr22:21661933-21662363	3	+	21661933	21661933	8553170	1	430,	0,
#Partially deleted in new
chr22	21666008	21700015	chr22:21666008-21700015	3	+	21666099	21695490	0	21	123,50,46,63,52,52,92,90,76,161,76,107,90,34,118,57,73,63,134,103,3269,	0,3904,4557,4988,6321,9055,15290,16428,17173,18744,20474,20883,21634,22064,22723,27807,28584,28746,28928,29385,30738,
#Partially deleted in new
chr22	21666008	21670283	chr22:21666008-21670283	0	+	21666008	21666008	8553170	2	123,371,	0,3904,
#Partially deleted in new
chr22	21666021	21696423	chr22:21666021-21696423	1	+	21666099	21695490	0	20	110,50,46,63,52,52,92,90,76,161,76,107,90,34,118,57,73,63,134,1030,	0,3891,4544,4975,6308,9042,15277,16415,17160,18731,20461,20870,21621,22051,22710,27794,28571,28733,28915,29372,
#Partially deleted in new
chr22	21666021	21697866	chr22:21666021-21697866	1	+	21666099	21696903	0	21	110,50,46,63,52,52,92,90,76,161,76,107,90,34,118,57,73,63,134,99,982,	0,3891,4544,4975,6308,9042,15277,16415,17160,18731,20461,20870,21621,22051,22710,27794,28571,28733,28915,29376,30863,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr22	21666022	21697912	chr22:21666022-21697912	0	+	21666099	21670342	789624	22	109,50,62,46,63,52,52,92,90,76,161,89,76,107,90,34,118,57,73,63,134,2519,	0,3890,4276,4543,4974,6307,9041,15276,16414,17159,18730,19615,20460,20869,21620,22050,22709,27793,28570,28732,28914,29371,
#Partially deleted in new
chr22	21666028	21684878	chr22:21666028-21684878	0	+	21666028	21666028	8553170	11	103,50,113,46,63,52,52,92,90,76,126,	0,3884,4235,4537,4968,6301,9035,15270,16408,17153,18724,
#Partially deleted in new
chr22	21666039	21698276	chr22:21666039-21698276	1	+	21666099	21695490	0	21	92,50,46,63,52,52,92,90,76,161,76,107,90,34,118,57,73,63,134,103,2246,	0,3873,4526,4957,6290,9024,15259,16397,17142,18713,20443,20852,21603,22033,22692,27776,28553,28715,28897,29354,29991,
#Partially deleted in new
chr22	21666078	21671025	chr22:21666078-21671025	0	+	21666078	21666078	8553170	3	53,50,460,	0,3834,4487,
#Partially deleted in new
chr22	21672329	21673609	chr22:21672329-21673609	0	+	21672329	21672329	8553170	2	52,97,	0,1183,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	21685672	21697901	chr22:21685672-21697901	0	+	21685672	21685672	8553170	12	54,76,107,90,34,118,57,73,63,134,103,1017,	0,810,1219,1970,2400,3059,8143,8920,9082,9264,9721,11212,
#Deleted in new
chr22	21694660	21697902	chr22:21694660-21697902	0	+	21694660	21694660	8553170	3	157,560,1018,	0,276,2224,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	21697543	21735834	chr22:21697543-21735834	3	-	21701128	21710744	789624	5	3675,109,44,281,220,	0,5826,6295,13084,38071,
#Partially deleted in new
chr22	21700864	21735761	chr22:21700864-21735761	0	-	21700864	21700864	8553170	5	354,109,287,422,147,	0,2505,2974,9622,34750,
#Partially deleted in new
chr22	21704081	21735755	chr22:21704081-21735755	1	-	21704107	21710744	789624	3	44,281,141,	0,6546,31533,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	21722894	21723182	chr22:21722894-21723182	3	-	21722894	21722894	8553170	1	288,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	21754499	21867629	chr22:21754499-21867629	3	-	21769203	21867440	0	9	9741,126,110,132,115,117,190,183,308,	0,14695,18373,33757,34194,44512,51350,53164,112822,
#Partially deleted in new
chr22	21763983	21769428	chr22:21763983-21769428	0	-	21763983	21763983	8553170	2	257,234,	0,5211,
#Partially deleted in new
chr22	21769039	21867680	chr22:21769039-21867680	1	-	21769203	21867440	0	8	281,110,132,115,117,190,183,359,	0,3833,19217,19654,29972,36810,38624,98282,
#Partially deleted in new
chr22	21769203	21867440	chr22:21769203-21867440	1	-	21769203	21867440	0	7	117,110,115,117,190,183,119,	0,3669,19490,29808,36646,38460,98118,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	21792433	21792524	chr22:21792433-21792524	7	+	21792433	21792433	16724991	1	91,	0,
#Partially deleted in new
chr22	21885281	21885673	chr22:21885281-21885673	7	-	21885281	21885281	16724991	1	392,	0,
#Partially deleted in new
chr22	21919419	21952837	chr22:21919419-21952837	3	-	21923091	21946048	789624	8	4052,94,144,189,203,149,266,46,	0,6149,11728,13971,14604,20112,26423,33372,
#Partially deleted in new
chr22	21919426	21938584	chr22:21919426-21938584	1	-	21923091	21934077	789624	6	4045,94,144,189,203,912,	0,6142,11721,13964,14597,18246,
#Partially deleted in new
chr22	21923124	21926062	chr22:21923124-21926062	0	-	21923124	21923124	8553170	3	347,94,103,	0,2444,2835,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	21924875	21952831	chr22:21924875-21952831	1	-	21925467	21946048	789624	7	787,144,189,203,149,266,40,	0,6272,8515,9148,14656,20967,27916,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	21924875	21931248	chr22:21924875-21931248	0	-	21924875	21924875	8553170	3	153,94,101,	0,693,6272,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	21932713	21936929	chr22:21932713-21936929	0	-	21932713	21932713	8553170	3	62,189,2906,	0,677,1310,
#Partially deleted in new
chr22	21934023	21938576	chr22:21934023-21938576	0	-	21934023	21938246	789624	2	203,373,	0,4180,
#Deleted in new
chr22	21936961	21938531	chr22:21936961-21938531	0	-	21936961	21936961	8553170	2	255,328,	0,1242,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	21938292	21977632	chr22:21938292-21977632	3	+	21938292	21938292	8553170	2	1321,36531,	0,2809,
#Deleted in new
chr22	21952019	21952821	chr22:21952019-21952821	0	-	21952019	21952019	8553170	2	129,30,	0,772,
#Partially deleted in new
chr22	21957024	21982816	chr22:21957024-21982816	3	-	21957113	21975709	0	18	571,202,101,150,129,174,147,106,155,91,114,157,197,75,107,132,168,87,	0,1467,2107,2562,3296,5404,5722,6898,7136,8260,10578,11594,13185,14852,15587,17332,18615,25705,
#Partially deleted in new
chr22	21957026	21982790	chr22:21957026-21982790	0	-	21971055	21975709	789624	18	569,202,101,150,129,465,106,155,91,114,157,197,82,75,107,132,168,61,	0,1465,2105,2560,3294,5402,6896,7134,8258,10576,11592,13183,13953,14850,15585,17330,18613,25703,
#Partially deleted in new
chr22	21957026	21968740	chr22:21957026-21968740	0	-	21958405	21968740	789624	11	1667,101,150,129,174,147,106,155,91,114,122,	0,2105,2560,3294,5402,5720,6896,7134,8258,10576,11592,
#Partially deleted in new
chr22	21957030	21982750	chr22:21957030-21982750	1	-	21957113	21975709	0	18	565,202,101,150,129,174,147,106,155,91,114,157,197,75,107,132,168,337,	0,1461,2101,2556,3290,5398,5716,6892,7130,8254,10572,11588,13179,14846,15581,17326,18609,25383,
#Partially deleted in new
chr22	21957030	21982790	chr22:21957030-21982790	0	-	21971055	21975709	789624	17	1663,605,129,174,147,106,155,91,114,157,197,82,75,107,132,168,61,	0,2101,3290,5398,5716,6892,7130,8254,10572,11588,13179,13949,14846,15581,17326,18609,25699,
#Partially deleted in new
chr22	21957031	21967650	chr22:21957031-21967650	0	-	21962913	21967650	789624	10	1662,101,150,129,174,274,106,155,91,48,	0,2100,2555,3289,5397,5715,6891,7129,8253,10571,
#Deleted in new
chr22	21962127	21962895	chr22:21962127-21962895	0	-	21962127	21962127	8553170	2	475,149,	0,619,
#Partially deleted in new
chr22	21968618	21982780	chr22:21968618-21982780	0	-	21968618	21975709	789624	7	157,197,75,107,132,105,51,	0,1591,3258,3993,5738,7021,14111,
#Partially deleted in new
chr22	21970334	21971632	chr22:21970334-21971632	0	-	21970334	21970334	8553170	2	72,653,	0,645,
#Partially deleted in new
chr22	21971894	21982766	chr22:21971894-21982766	0	-	21971894	21975709	789624	6	57,107,132,168,49,37,	0,717,2462,3745,4010,10835,
#Partially deleted in new
chr22	21971896	21982813	chr22:21971896-21982813	0	-	21971896	21975709	789624	6	55,107,132,168,36,84,	0,715,2460,3743,10517,10833,
#Partially deleted in new
chr22	21972218	21975796	chr22:21972218-21975796	0	-	21972218	21972218	8553170	3	500,132,157,	0,2138,3421,
#Partially deleted in new
chr22	21974375	21982766	chr22:21974375-21982766	0	-	21974375	21975709	789624	5	113,168,207,36,37,	0,1264,1605,8038,8354,
#Partially deleted in new
chr22	21974378	21982787	chr22:21974378-21982787	0	-	21974378	21975709	789624	4	110,168,207,58,	0,1261,1602,8351,
#Partially deleted in new
chr22	21974418	21975969	chr22:21974418-21975969	0	-	21974418	21975709	789624	2	70,330,	0,1221,
#Partially deleted in new
chr22	21974432	21982793	chr22:21974432-21982793	0	-	21974432	21975709	789624	4	56,168,283,64,	0,1207,1472,8297,
#Partially deleted in new
chr22	21975645	21982773	chr22:21975645-21982773	0	-	21975645	21975709	789624	2	162,574,	0,6554,
#Partially deleted in new
chr22	21991098	22043858	chr22:21991098-22043858	5	-	21991098	21991098	16724991	5	656,630,300,106,177,	0,3045,4034,35123,52583,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	21991099	22043934	chr22:21991099-22043934	7	-	21991099	21991099	16724991	7	655,630,300,137,957,106,253,	0,3044,4033,32194,34073,35122,52582,
#Partially deleted in new
chr22	21991235	21995428	chr22:21991235-21995428	5	-	21991235	21991235	16724991	3	519,630,296,	0,2908,3897,
#Deleted in new
chr22	22026075	22026593	chr22:22026075-22026593	7	+	22026075	22026075	16724991	2	46,344,	0,174,
#Deleted in new
chr22	22030933	22031472	chr22:22030933-22031472	3	+	22030993	22031472	789624	2	109,310,	0,229,
#Deleted in new
chr22	22032744	22033194	chr22:22032744-22033194	7	+	22032744	22032744	16724991	2	52,293,	0,157,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	22036343	22040065	chr22:22036343-22040065	3	+	22036343	22036343	8553170	2	151,629,	0,3093,
#Deleted in new
chr22	22038642	22039126	chr22:22038642-22039126	7	+	22038642	22038642	16724991	2	46,329,	0,155,
#Partially deleted in new
chr22	22038642	22215269	chr22:22038642-22215269	1	+	22038642	22215269	789624	4	46,128,28,149,	0,48073,48204,176478,
#Deleted in new
chr22	22043617	22043942	chr22:22043617-22043942	7	+	22043617	22043617	16724991	1	325,	0,
#Deleted in new
chr22	22046429	22046591	chr22:22046429-22046591	7	+	22046429	22046429	16724991	1	162,	0,
#Deleted in new
chr22	22058432	22058892	chr22:22058432-22058892	7	+	22058432	22058432	16724991	1	460,	0,
#Deleted in new
chr22	22061076	22061538	chr22:22061076-22061538	7	+	22061076	22061076	16724991	2	48,293,	0,169,
#Deleted in new
chr22	22070224	22070707	chr22:22070224-22070707	7	+	22070224	22070224	16724991	2	46,314,	0,169,
#Deleted in new
chr22	22075365	22075666	chr22:22075365-22075666	7	+	22075365	22075365	16724991	1	301,	0,
#Deleted in new
chr22	22079769	22080263	chr22:22079769-22080263	7	+	22079769	22079769	16724991	2	46,338,	0,156,
#Deleted in new
chr22	22086560	22087110	chr22:22086560-22087110	7	+	22086560	22086560	16724991	2	46,395,	0,155,
#Deleted in new
chr22	22087923	22088085	chr22:22087923-22088085	7	+	22087923	22087923	16724991	1	162,	0,
#Partially deleted in new
chr22	22098699	22099212	chr22:22098699-22099212	3	+	22098745	22099212	789624	2	107,307,	0,206,
#Partially deleted in new
chr22	22103218	22104857	chr22:22103218-22104857	7	+	22103218	22103218	16724991	2	829,433,	0,1206,
#Deleted in new
chr22	22114843	22118005	chr22:22114843-22118005	7	-	22114843	22114843	16724991	2	402,521,	0,2641,
#Deleted in new
chr22	22155581	22155942	chr22:22155581-22155942	7	+	22155581	22155581	16724991	2	130,151,	0,210,
#Deleted in new
chr22	22157381	22157631	chr22:22157381-22157631	7	+	22157381	22157381	16724991	1	250,	0,
#Deleted in new
chr22	22162198	22162681	chr22:22162198-22162681	3	+	22162198	22162681	789624	2	52,310,	0,173,
#Deleted in new
chr22	22168288	22168634	chr22:22168288-22168634	7	+	22168288	22168288	16724991	1	346,	0,
#Deleted in new
chr22	22170982	22171556	chr22:22170982-22171556	7	-	22170982	22170982	16724991	1	574,	0,
#Deleted in new
chr22	22179227	22179477	chr22:22179227-22179477	7	+	22179227	22179227	16724991	1	250,	0,
#Deleted in new
chr22	22182581	22182885	chr22:22182581-22182885	7	+	22182581	22182581	16724991	1	304,	0,
#Deleted in new
chr22	22185940	22186619	chr22:22185940-22186619	7	+	22185940	22185940	16724991	1	679,	0,
#Deleted in new
chr22	22195798	22196276	chr22:22195798-22196276	3	+	22195798	22196276	0	2	46,307,	0,171,
#Deleted in new
chr22	22198559	22199011	chr22:22198559-22199011	7	+	22198559	22198559	16724991	2	45,297,	0,155,
#Deleted in new
chr22	22201662	22202161	chr22:22201662-22202161	3	+	22201674	22202161	789624	2	58,323,	0,176,
#Deleted in new
chr22	22214793	22215270	chr22:22214793-22215270	2	+	22214806	22215270	789624	2	59,306,	0,171,
#Deleted in new
chr22	22219646	22220133	chr22:22219646-22220133	7	+	22219646	22219646	16724991	2	43,324,	0,163,
#Deleted in new
chr22	22223186	22224566	chr22:22223186-22224566	7	-	22223186	22223186	16724991	1	1380,	0,
#Partially deleted in new
chr22	22228718	22230469	chr22:22228718-22230469	7	-	22228718	22228718	16724991	2	607,635,	0,1116,
#Deleted in new
chr22	22244674	22245515	chr22:22244674-22245515	3	+	22244813	22245337	0	2	185,570,	0,271,
#Deleted in new
chr22	22244779	22245505	chr22:22244779-22245505	1	+	22244802	22245337	789624	2	80,546,	0,180,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	22264600	22273020	chr22:22264600-22273020	3	+	22264600	22264600	8553170	1	8420,	0,
#Deleted in new
chr22	22283927	22287220	chr22:22283927-22287220	3	-	22283927	22283927	8553170	1	3293,	0,
#Deleted in new
chr22	22293732	22294794	chr22:22293732-22294794	3	+	22293732	22293732	8553170	2	349,175,	0,887,
#Partially deleted in new
chr22	22303223	22310401	chr22:22303223-22310401	7	+	22303223	22303223	16724991	8	74,172,189,180,59,123,148,176,	0,719,3609,3882,4309,5473,6512,7002,
#Deleted in new
chr22	22318726	22319226	chr22:22318726-22319226	3	+	22318731	22319226	789624	2	51,328,	0,172,
#Deleted in new
chr22	22322471	22322969	chr22:22322471-22322969	3	+	22322507	22322969	789624	2	82,307,	0,191,
#Deleted in new
chr22	22327299	22327814	chr22:22327299-22327814	3	+	22327350	22327814	789624	2	97,308,	0,207,
#Deleted in new
chr22	22339572	22341214	chr22:22339572-22341214	7	+	22339572	22339572	16724991	1	1642,	0,
#Deleted in new
chr22	22343186	22343732	chr22:22343186-22343732	3	+	22343223	22343732	789624	2	83,326,	0,220,
#Deleted in new
chr22	22347806	22348164	chr22:22347806-22348164	7	+	22347806	22347806	16724991	1	358,	0,
#Deleted in new
chr22	22352939	22353433	chr22:22352939-22353433	3	+	22352939	22353382	789624	2	46,323,	0,171,
#Deleted in new
chr22	22357738	22358260	chr22:22357738-22358260	3	+	22357794	22358260	0	2	102,305,	0,217,
#Partially deleted in new
chr22	22366209	22367770	chr22:22366209-22367770	7	+	22366209	22366209	16724991	1	1561,	0,
#Partially deleted in new
chr22	22369613	22370087	chr22:22369613-22370087	3	+	22369647	22370087	789624	2	80,305,	0,169,
#Partially deleted in new
chr22	22370828	22371120	chr22:22370828-22371120	7	+	22370828	22370828	16724991	1	292,	0,
#Partially deleted in new
chr22	22375985	22376505	chr22:22375985-22376505	3	+	22376013	22376505	789624	2	74,323,	0,197,
#Partially deleted in new
chr22	22380765	22381347	chr22:22380765-22381347	3	+	22380879	22381347	789624	2	160,307,	0,275,
#Deleted in new
chr22	22395017	22395489	chr22:22395017-22395489	3	+	22395051	22395489	789624	2	80,305,	0,167,
#Deleted in new
chr22	22397031	22397524	chr22:22397031-22397524	7	+	22397031	22397031	16724991	2	45,336,	0,157,
#Deleted in new
chr22	22398848	22398999	chr22:22398848-22398999	7	+	22398848	22398848	16724991	1	151,	0,
#Deleted in new
chr22	22404206	22404721	chr22:22404206-22404721	7	+	22404206	22404206	16724991	2	99,307,	0,208,
#Deleted in new
chr22	22409765	22410282	chr22:22409765-22410282	3	+	22409816	22410282	789624	2	97,310,	0,207,
#Deleted in new
chr22	22420325	22421310	chr22:22420325-22421310	7	+	22420325	22420325	16724991	1	985,	0,
#Deleted in new
chr22	22425820	22426314	chr22:22425820-22426314	7	+	22425820	22425820	16724991	2	49,336,	0,158,
#Deleted in new
chr22	22427539	22428035	chr22:22427539-22428035	3	+	22427544	22428035	789624	2	51,323,	0,173,
#Deleted in new
chr22	22431957	22432465	chr22:22431957-22432465	3	+	22431997	22432465	789624	2	86,307,	0,201,
#Deleted in new
chr22	22446685	22448336	chr22:22446685-22448336	7	+	22446685	22446685	16724991	1	1651,	0,
#Deleted in new
chr22	22450201	22450652	chr22:22450201-22450652	7	+	22450201	22450201	16724991	2	34,306,	0,145,
#Deleted in new
chr22	22465658	22465986	chr22:22465658-22465986	7	+	22465658	22465658	16724991	1	328,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	22484420	22509154	chr22:22484420-22509154	3	-	22487766	22489398	789624	4	5046,118,61,496,	0,9642,23389,24238,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	22484857	22508733	chr22:22484857-22508733	0	-	22487766	22489398	789624	5	1121,2606,118,61,75,	0,2003,9205,22952,23801,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	22484872	22489468	chr22:22484872-22489468	1	-	22487766	22489398	789624	2	1106,2608,	0,1988,
#Partially deleted in new
chr22	22513735	22520270	chr22:22513735-22520270	3	-	22514001	22515630	789624	2	1966,182,	0,6353,
#Partially deleted in new
chr22	22547700	22559340	chr22:22547700-22559340	3	-	22548066	22556832	789624	6	943,609,323,119,36,166,	0,2025,3066,9111,9844,11474,
#Partially deleted in new
chr22	22547700	22559361	chr22:22547700-22559361	0	-	22547700	22547700	8553170	5	943,609,323,769,187,	0,2025,3066,9111,11474,
#Partially deleted in new
chr22	22547701	22559143	chr22:22547701-22559143	1	-	22548066	22556832	789624	6	942,609,323,119,36,173,	0,2024,3065,9110,9843,11269,
#Partially deleted in new
chr22	22547701	22559289	chr22:22547701-22559289	1	-	22548066	22556832	789624	5	942,609,323,769,115,	0,2024,3065,9110,11473,
#Partially deleted in new
chr22	22547703	22559143	chr22:22547703-22559143	1	-	22548066	22556832	789624	6	940,609,323,98,36,173,	0,2022,3063,9108,9841,11267,
#Partially deleted in new
chr22	22547766	22559288	chr22:22547766-22559288	1	-	22548066	22556832	789624	6	877,609,323,98,36,114,	0,1959,3000,9045,9778,11408,
#Partially deleted in new
chr22	22550073	22559279	chr22:22550073-22559279	0	-	22550073	22556832	789624	5	261,323,166,36,105,	0,693,6738,7471,9101,
#Partially deleted in new
chr22	22550182	22555926	chr22:22550182-22555926	0	-	22550182	22555926	789624	3	152,323,91,	0,584,5653,
#Partially deleted in new
chr22	22550220	22559083	chr22:22550220-22559083	0	-	22550220	22556832	789624	5	114,323,119,36,113,	0,546,6591,7324,8750,
#Partially deleted in new
chr22	22550245	22557721	chr22:22550245-22557721	0	-	22550245	22550245	8553170	3	89,323,177,	0,521,7299,
#Partially deleted in new
chr22	22550298	22554179	chr22:22550298-22554179	0	-	22550298	22550298	8553170	3	36,323,350,	0,468,3531,
#Partially deleted in new
chr22	22550753	22559267	chr22:22550753-22559267	1	-	22550762	22556832	789624	4	336,275,36,93,	0,6058,6791,8421,
#Partially deleted in new
chr22	22550818	22557592	chr22:22550818-22557592	0	-	22551058	22556832	789624	4	271,143,119,48,	0,1990,5993,6726,
#Partially deleted in new
chr22	22550851	22557754	chr22:22550851-22557754	0	-	22550851	22556832	789624	3	238,119,210,	0,5960,6693,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	22559342	22566602	chr22:22559342-22566602	3	+	22559342	22559342	789624	3	65,110,2936,	0,3520,4324,
#Deleted in new
chr22	22580013	22580296	chr22:22580013-22580296	7	+	22580013	22580013	16724991	1	283,	0,
#Deleted in new
chr22	22588154	22588688	chr22:22588154-22588688	3	+	22588212	22588688	789624	2	104,308,	0,226,
#Deleted in new
chr22	22594527	22595056	chr22:22594527-22595056	3	+	22594566	22595056	789624	2	82,301,	0,228,
#Deleted in new
chr22	22604444	22605165	chr22:22604444-22605165	7	+	22604444	22604444	16724991	2	36,261,	0,460,
#Deleted in new
chr22	22618571	22619163	chr22:22618571-22619163	7	+	22618571	22618571	16724991	2	40,258,	0,334,
#Partially deleted in new
chr22	22630064	22636153	chr22:22630064-22636153	7	+	22630064	22630064	16724991	7	60,110,140,135,106,163,90,	0,896,2257,3452,4532,5116,5999,
#Partially deleted in new
chr22	22639176	22644473	chr22:22639176-22644473	7	-	22639176	22639176	16724991	2	152,1782,	0,3515,
#Deleted in new
chr22	22642250	22644085	chr22:22642250-22644085	5	-	22642250	22642250	16724991	1	1835,	0,
#Partially deleted in new
chr22	22644474	22647903	chr22:22644474-22647903	3	+	22646345	22647741	789624	6	173,210,128,113,114,309,	0,1837,2279,2508,2702,3120,
#Deleted in new
chr22	22646081	22647903	chr22:22646081-22647903	1	+	22646345	22647741	789624	6	99,210,128,113,114,309,	0,230,672,901,1095,1513,
#Deleted in new
chr22	22646309	22647898	chr22:22646309-22647898	0	+	22646309	22646309	8553170	4	212,128,308,304,	0,444,673,1285,
#Deleted in new
chr22	22646345	22647741	chr22:22646345-22647741	1	+	22646345	22647741	789624	5	176,128,113,114,147,	0,408,637,831,1249,
#Deleted in new
chr22	22646345	22647741	chr22:22646345-22647741	1	+	22646345	22647741	789624	5	176,128,56,150,147,	0,408,637,795,1249,
#Deleted in new
chr22	22661298	22661542	chr22:22661298-22661542	7	+	22661298	22661298	16724991	1	244,	0,
#Deleted in new
chr22	22664472	22664907	chr22:22664472-22664907	7	+	22664472	22664472	16724991	2	46,258,	0,177,
#Deleted in new
chr22	22668287	22668806	chr22:22668287-22668806	3	+	22668325	22668806	789624	2	84,293,	0,226,
#Deleted in new
chr22	22673151	22673602	chr22:22673151-22673602	7	+	22673151	22673151	16724991	2	58,244,	0,207,
#Deleted in new
chr22	22679096	22679345	chr22:22679096-22679345	7	+	22679096	22679096	16724991	1	249,	0,
#Deleted in new
chr22	22686725	22687271	chr22:22686725-22687271	3	+	22686768	22687271	789624	2	89,291,	0,255,
#Deleted in new
chr22	22689830	22689978	chr22:22689830-22689978	7	+	22689830	22689830	16724991	1	148,	0,
#Deleted in new
chr22	22692777	22693312	chr22:22692777-22693312	3	-	22692777	22692777	8553170	2	285,166,	0,369,
#Deleted in new
chr22	22694438	22694952	chr22:22694438-22694952	7	+	22694438	22694438	16724991	2	40,157,	0,357,
#Deleted in new
chr22	22697788	22698407	chr22:22697788-22698407	3	+	22697950	22698407	789624	2	208,294,	0,325,
#Deleted in new
chr22	22700759	22700970	chr22:22700759-22700970	7	+	22700759	22700759	16724991	1	211,	0,
#Deleted in new
chr22	22704264	22704822	chr22:22704264-22704822	3	+	22704328	22704822	789624	2	110,299,	0,259,
#Deleted in new
chr22	22711688	22713203	chr22:22711688-22713203	3	+	22712418	22713203	0	3	117,180,305,	0,596,1210,
#Deleted in new
chr22	22715289	22715419	chr22:22715289-22715419	7	+	22715289	22715289	16724991	1	130,	0,
#Deleted in new
chr22	22720622	22721145	chr22:22720622-22721145	3	+	22720662	22721145	789624	2	86,291,	0,232,
#Deleted in new
chr22	22730724	22731090	chr22:22730724-22731090	7	-	22730724	22730724	16724991	1	366,	0,
#Deleted in new
chr22	22734606	22735089	chr22:22734606-22735089	3	+	22734619	22735089	789624	2	59,308,	0,175,
#Deleted in new
chr22	22738943	22739187	chr22:22738943-22739187	7	+	22738943	22738943	16724991	1	244,	0,
#Deleted in new
chr22	22747382	22747921	chr22:22747382-22747921	3	+	22747420	22747921	789624	2	84,301,	0,238,
#Deleted in new
chr22	22755553	22755797	chr22:22755553-22755797	7	+	22755553	22755553	16724991	1	244,	0,
#Deleted in new
chr22	22758699	22759218	chr22:22758699-22759218	3	+	22758740	22759218	0	2	87,315,	0,204,
#Deleted in new
chr22	22762293	22762516	chr22:22762293-22762516	7	+	22762293	22762293	16724991	1	223,	0,
#Deleted in new
chr22	22771823	22772582	chr22:22771823-22772582	3	+	22771832	22772582	789624	2	55,301,	0,458,
#Deleted in new
chr22	22774528	22774691	chr22:22774528-22774691	7	+	22774528	22774528	16724991	1	163,	0,
#Partially deleted in new
chr22	22785642	22787268	chr22:22785642-22787268	7	-	22785642	22785642	16724991	2	913,93,	0,1533,
#Deleted in new
chr22	22792490	22793007	chr22:22792490-22793007	3	+	22792532	22793007	789624	2	88,312,	0,205,
#Deleted in new
chr22	22803075	22803360	chr22:22803075-22803360	7	+	22803075	22803075	16724991	1	285,	0,
#Deleted in new
chr22	22811746	22812281	chr22:22811746-22812281	3	+	22811781	22812281	789624	2	81,301,	0,234,
#Deleted in new
chr22	22814670	22814926	chr22:22814670-22814926	7	+	22814670	22814670	16724991	1	256,	0,
#Deleted in new
chr22	22819009	22819756	chr22:22819009-22819756	3	+	22819124	22819756	789624	2	161,300,	0,447,
#Deleted in new
chr22	22822657	22823289	chr22:22822657-22823289	3	+	22822820	22823289	0	2	209,308,	0,324,
#Deleted in new
chr22	22822775	22822871	chr22:22822775-22822871	3	+	22822775	22822775	5263520	1	96,	0,
#Deleted in new
chr22	22834864	22835117	chr22:22834864-22835117	7	+	22834864	22834864	16724991	1	253,	0,
#Deleted in new
chr22	22838601	22838872	chr22:22838601-22838872	7	+	22838601	22838601	16724991	1	271,	0,
#Deleted in new
chr22	22850374	22850624	chr22:22850374-22850624	7	+	22850374	22850374	16724991	1	250,	0,
#Deleted in new
chr22	22856761	22857038	chr22:22856761-22857038	7	+	22856761	22856761	16724991	1	277,	0,
#Deleted in new
chr22	22858024	22858268	chr22:22858024-22858268	7	+	22858024	22858024	16724991	1	244,	0,
#Deleted in new
chr22	22871506	22872035	chr22:22871506-22872035	3	+	22871538	22872033	789624	2	78,325,	0,204,
#Deleted in new
chr22	22873211	22873440	chr22:22873211-22873440	7	+	22873211	22873211	16724991	1	229,	0,
#Deleted in new
chr22	22880705	22881396	chr22:22880705-22881396	3	+	22880757	22881396	789624	2	98,300,	0,391,
#Deleted in new
chr22	22886266	22886379	chr22:22886266-22886379	3	+	22886266	22886266	5263520	1	113,	0,
#Partially deleted in new
chr22	22887779	22895825	chr22:22887779-22895825	3	+	22888053	22895694	789624	3	480,119,451,	0,5920,7595,
#Partially deleted in new
chr22	22887779	22896107	chr22:22887779-22896107	1	+	22888053	22895694	789624	3	480,122,733,	0,5917,7595,
#Partially deleted in new
chr22	22887828	22895825	chr22:22887828-22895825	1	+	22888053	22895423	789624	2	431,451,	0,7546,
#Deleted in new
chr22	22893691	22893818	chr22:22893691-22893818	3	+	22893691	22893818	789624	1	127,	0,
#Deleted in new
chr22	22895374	22895834	chr22:22895374-22895834	3	+	22895374	22895694	8553170	1	460,	0,
#Deleted in new
chr22	22899480	22899655	chr22:22899480-22899655	3	+	22899513	22899655	789624	1	175,	0,
#Deleted in new
chr22	22900975	22901437	chr22:22900975-22901437	3	+	22900975	22901295	789624	1	462,	0,
#Deleted in new
chr22	22904849	22905025	chr22:22904849-22905025	3	+	22904874	22905025	789624	1	176,	0,
#Deleted in new
chr22	22906341	22906803	chr22:22906341-22906803	3	+	22906341	22906661	789624	1	462,	0,
#Deleted in new
chr22	22910573	22910606	chr22:22910573-22910606	3	+	22910573	22910606	789624	1	33,	0,
#Deleted in new
chr22	22910827	22911075	chr22:22910827-22911075	7	+	22910827	22910827	16724991	1	248,	0,
#Deleted in new
chr22	22914236	22914308	chr22:22914236-22914308	3	+	22914236	22914308	789624	1	72,	0,
#Deleted in new
chr22	22915634	22915927	chr22:22915634-22915927	7	+	22915634	22915634	16724991	1	293,	0,
#Deleted in new
chr22	22918131	22918201	chr22:22918131-22918201	3	+	22918131	22918201	789624	1	70,	0,
#Deleted in new
chr22	22919534	22919851	chr22:22919534-22919851	7	+	22919534	22919534	16724991	1	317,	0,
#Deleted in new
chr22	22921389	22921435	chr22:22921389-22921435	3	+	22921389	22921435	789624	1	46,	0,
#Deleted in new
chr22	22922593	22923034	chr22:22922593-22923034	3	+	22922593	22922913	8553170	1	441,	0,
#Deleted in new
chr22	22988262	22988581	chr22:22988262-22988581	7	+	22988262	22988262	16724991	1	319,	0,
#Partially deleted in new
chr22	22990689	23008356	chr22:22990689-23008356	7	+	22990689	22990689	16724991	3	88,67,103,	0,3472,17564,
#Partially deleted in new
chr22	23059414	23142093	chr22:23059414-23142093	3	-	23059461	23140420	789624	7	304,137,232,119,103,251,145,	0,2394,4487,74611,79425,80807,82534,
#Partially deleted in new
chr22	23070360	23125037	chr22:23070360-23125037	3	+	23095695	23123431	789624	3	210,1172,1951,	0,24886,52726,
#Partially deleted in new
chr22	23070573	23095716	chr22:23070573-23095716	0	+	23070573	23070573	8553170	2	182,470,	0,24673,
#Deleted in new
chr22	23122377	23123342	chr22:23122377-23123342	0	+	23122377	23122377	8553170	2	325,256,	0,709,
#Partially deleted in new
chr22	23124226	23134074	chr22:23124226-23134074	0	-	23124327	23134074	789624	2	274,49,	0,9799,
#Partially deleted in new
chr22	23131176	23138914	chr22:23131176-23138914	0	-	23131669	23138914	789624	3	501,119,75,	0,2849,7663,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	23132729	23133005	chr22:23132729-23133005	3	-	23132729	23132729	8553170	1	276,	0,
#Partially deleted in new
chr22	23135992	23140300	chr22:23135992-23140300	0	-	23136297	23140300	789624	3	327,103,79,	0,2847,4229,
#Partially deleted in new
chr22	23136197	23145021	chr22:23136197-23145021	1	-	23136297	23140420	789624	4	125,103,251,40,	0,2642,4024,8784,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	23137804	23137864	chr22:23137804-23137864	3	-	23137804	23137804	8553170	1	60,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr22	23145325	23164350	chr22:23145325-23164350	3	+	23145365	23161564	789624	11	226,81,92,66,102,65,52,82,91,120,2851,	0,1279,4737,7135,7707,10642,12666,13572,13837,15553,16174,
#Partially deleted in new
chr22	23145365	23161564	chr22:23145365-23161564	1	+	23145365	23161564	789624	10	186,81,92,102,65,52,82,91,120,65,	0,1239,4697,7667,10602,12626,13532,13797,15513,16134,
#Partially deleted in new
chr22	23150112	23156311	chr22:23150112-23156311	0	+	23150112	23156154	789624	4	42,66,102,344,	0,2348,2920,5855,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	23179703	23261428	chr22:23179703-23261428	0	+	23179703	23179703	8553170	5	129,168,182,105,74,	0,63114,74095,81246,81651,
#Deleted in new
chr22	23179917	23180172	chr22:23179917-23180172	7	-	23179917	23179917	16724991	1	255,	0,
#Partially deleted in new
chr22	23180209	23318037	chr22:23180209-23318037	3	+	23180960	23315522	0	23	2030,182,105,186,108,61,53,141,122,169,120,76,105,75,98,132,60,110,140,135,106,163,2605,	0,73589,80740,81145,88198,91322,92871,93424,103767,104823,106949,107887,109307,110129,112331,114814,129214,130114,131487,132677,133758,134342,135223,
#Partially deleted in new
chr22	23180364	23315950	chr22:23180364-23315950	1	+	23180960	23315522	0	22	1875,182,105,186,108,61,53,141,122,169,120,76,105,75,98,60,110,140,135,106,163,518,	0,73434,80585,80990,88043,91167,92716,93269,103612,104668,106794,107732,109152,109974,112176,129059,129959,131332,132522,133603,134187,135068,
#Partially deleted in new
chr22	23198252	23253833	chr22:23198252-23253833	0	+	23198252	23198252	8553170	2	133,35,	0,55546,
#Partially deleted in new
chr22	23198331	23253833	chr22:23198331-23253833	0	+	23198331	23198331	8553170	3	54,142,35,	0,879,55467,
#Partially deleted in new
chr22	23251031	23261393	chr22:23251031-23261393	0	+	23251031	23251031	8553170	4	209,182,105,39,	0,2767,9918,10323,
#Partially deleted in new
chr22	23253959	23285114	chr22:23253959-23285114	0	+	23253959	23285114	789624	8	21,105,186,61,53,141,122,82,	0,6990,7395,17572,19121,19674,30017,31073,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	23261781	23262071	chr22:23261781-23262071	3	-	23261781	23261781	8553170	1	290,	0,
#Deleted in new
chr22	23262766	23265005	chr22:23262766-23265005	7	+	23262766	23262766	16724991	1	2239,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	23283208	23291131	chr22:23283208-23291131	0	+	23283208	23283208	8553170	5	890,169,120,76,1615,	0,1824,3950,4888,6308,
#Partially deleted in new
chr22	23283787	23287173	chr22:23283787-23287173	0	+	23283787	23283787	8553170	3	311,169,15,	0,1245,3371,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	23289614	23310433	chr22:23289614-23310433	0	+	23289614	23289614	8553170	5	7,98,132,60,491,	0,2926,5409,19809,20328,
#Partially deleted in new
chr22	23295040	23302863	chr22:23295040-23302863	0	+	23295040	23295040	8553170	2	115,523,	0,7300,
#Partially deleted in new
chr22	23306153	23310433	chr22:23306153-23310433	0	+	23306153	23306153	8553170	4	96,197,60,110,	0,1414,3270,4170,
#Partially deleted in new
chr22	23306744	23313999	chr22:23306744-23313999	0	+	23306744	23306744	8553170	6	86,60,110,140,135,32,	0,2679,3579,4952,6142,7223,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	23309473	23318034	chr22:23309473-23318034	0	+	23309473	23309473	8553170	6	960,222,135,106,163,2602,	0,2223,3413,4494,5078,5959,
#Deleted in new
chr22	23312387	23314695	chr22:23312387-23314695	0	+	23312387	23312387	8553170	2	634,144,	0,2164,
#Partially deleted in new
chr22	23322542	23322927	chr22:23322542-23322927	7	-	23322542	23322542	16724991	1	385,	0,
#Partially deleted in new
chr22	23326615	23328493	chr22:23326615-23328493	3	+	23326615	23326615	789624	2	176,170,	0,1708,
#Partially deleted in new
chr22	23359602	23377014	chr22:23359602-23377014	5	-	23359602	23359602	16724991	7	151,69,141,105,105,154,134,	0,3501,6675,9177,10755,13992,17278,
#Partially deleted in new
chr22	23366301	23376896	chr22:23366301-23376896	4	-	23366301	23366301	16724991	4	117,105,119,16,	0,4056,7328,10579,
#Partially deleted in new
chr22	23370094	23387731	chr22:23370094-23387731	7	-	23370094	23370094	16724991	5	368,119,134,317,36,	0,3535,6786,11868,17601,
#Partially deleted in new
chr22	23370094	23380752	chr22:23370094-23380752	4	-	23370094	23370094	16724991	4	368,119,134,28,	0,3535,6786,10630,
#Partially deleted in new
chr22	23373647	23377071	chr22:23373647-23377071	4	-	23373647	23373647	16724991	2	101,191,	0,3233,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	23390605	23402567	chr22:23390605-23402567	5	-	23390605	23390605	16724991	5	1119,824,113,119,207,	0,9154,11235,11431,11755,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	23390605	23402726	chr22:23390605-23402726	7	-	23390605	23390605	16724991	3	1119,824,366,	0,9154,11755,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	23391376	23402572	chr22:23391376-23402572	4	-	23391376	23391376	16724991	6	348,107,132,824,113,212,	0,1350,2549,8383,10464,10984,
#Deleted in new
chr22	23392552	23394792	chr22:23392552-23394792	7	+	23392552	23392552	16724991	9	521,108,105,57,60,65,58,50,178,	0,621,812,1086,1225,1389,1627,1938,2062,
#Deleted in new
chr22	23392584	23399608	chr22:23392584-23399608	4	-	23392584	23392584	16724991	4	249,132,29,25,	0,1341,5493,6999,
#Deleted in new
chr22	23397937	23402157	chr22:23397937-23402157	5	-	23397937	23397937	16724991	4	169,1000,113,121,	0,1646,3903,4099,
#Partially deleted in new
chr22	23433563	23435071	chr22:23433563-23435071	3	+	23433563	23433563	789624	3	498,171,248,	0,996,1260,
#Partially deleted in new
chr22	23434170	23434731	chr22:23434170-23434731	0	+	23434170	23434170	8553170	2	165,172,	0,389,
#Partially deleted in new
chr22	23446597	23460788	chr22:23446597-23460788	7	+	23446597	23446597	16724991	2	205,436,	0,13755,
#Deleted in new
chr22	23458378	23460833	chr22:23458378-23460833	5	+	23458378	23458378	16724991	2	105,481,	0,1974,
#Deleted in new
chr22	23460348	23460511	chr22:23460348-23460511	5	+	23460348	23460348	16724991	1	163,	0,
#Partially deleted in new
chr22	23462085	23486980	chr22:23462085-23486980	3	-	23462085	23462085	789624	12	593,42,151,42,22,356,34,62,84,31,59,102,	0,5189,7251,7910,8229,8722,11292,11791,18331,20489,20982,24793,
#Deleted in new
chr22	23512493	23513602	chr22:23512493-23513602	3	-	23512493	23512493	8553170	2	150,327,	0,782,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	23536880	23539480	chr22:23536880-23539480	1	+	23536880	23536880	8553170	2	256,720,	0,1880,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	23543862	23547797	chr22:23543862-23547797	1	+	23543862	23543862	8553170	1	3935,	0,
#Partially deleted in new
chr22	23567063	23573122	chr22:23567063-23573122	3	+	23567063	23567063	8553170	5	261,46,83,79,100,	0,988,1496,5482,5959,
#Partially deleted in new
chr22	23567063	23573507	chr22:23567063-23573507	0	+	23567063	23567063	8553170	4	261,46,83,43,	0,988,1496,6401,
#Partially deleted in new
chr22	23573124	23580239	chr22:23573124-23580239	1	-	23573536	23580190	0	2	461,255,	0,6860,
#Partially deleted in new
chr22	23573124	23580308	chr22:23573124-23580308	3	-	23573265	23580190	0	3	461,116,324,	0,1842,6860,
#Partially deleted in new
chr22	23573368	23580302	chr22:23573368-23580302	0	-	23573368	23580190	789624	3	217,119,318,	0,1598,6616,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	23580879	23583859	chr22:23580879-23583859	3	-	23580879	23580879	8553170	3	684,346,51,	0,2253,2929,
#Deleted in new
chr22	23607040	23608407	chr22:23607040-23608407	7	+	23607040	23607040	16724991	2	136,245,	0,1122,
#Partially deleted in new
chr22	23608451	23632321	chr22:23608451-23632321	3	-	23608763	23632023	789624	12	317,42,22,80,22,83,30,22,86,22,68,506,	0,4837,5187,5683,8401,9123,10912,12142,13639,16431,17529,23364,
#Deleted in new
chr22	23610328	23610538	chr22:23610328-23610538	7	+	23610328	23610328	16724991	1	210,	0,
#Partially deleted in new
chr22	23613286	23632023	chr22:23613286-23632023	1	-	23613286	23632023	789624	11	44,22,80,22,83,30,22,86,22,68,208,	0,352,848,3566,4288,6077,7307,8804,11596,12694,18529,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	23638486	23717356	chr22:23638486-23717356	0	-	23638486	23638486	8553170	10	456,136,143,345,113,112,82,156,186,326,	0,21378,45238,56686,66942,70643,71299,75700,76522,78544,
#Partially deleted in new
chr22	23638486	23652886	chr22:23638486-23652886	0	-	23638486	23638486	8553170	4	456,116,98,26,	0,1821,13992,14374,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	23638486	23717356	chr22:23638486-23717356	0	-	23638486	23638486	789624	12	456,136,143,121,1399,120,113,112,82,156,186,326,	0,21378,45238,51749,55632,62239,66942,70643,71299,75700,76522,78544,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	23638486	23717321	chr22:23638486-23717321	0	-	23638486	23638486	8553170	12	456,116,136,143,121,1399,113,112,82,156,186,214,	0,1821,21378,45238,51749,55632,66942,70643,71299,75700,76522,78621,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	23638486	23717321	chr22:23638486-23717321	0	-	23638486	23638486	8553170	10	456,136,143,120,113,112,82,100,186,214,	0,21378,45238,62239,66942,70643,71299,75700,76522,78621,
#Partially deleted in new
chr22	23638486	23693151	chr22:23638486-23693151	3	-	23638486	23638486	8553170	5	456,136,143,165,2916,	0,21378,45238,48344,51749,
#Partially deleted in new
chr22	23638491	23640762	chr22:23638491-23640762	7	-	23638491	23638491	16724991	2	451,455,	0,1816,
#Partially deleted in new
chr22	23638677	23640425	chr22:23638677-23640425	5	-	23638677	23638677	16724991	2	265,118,	0,1630,
#Partially deleted in new
chr22	23649212	23653334	chr22:23649212-23653334	7	-	23649212	23649212	16724991	6	143,128,98,58,84,126,	0,217,3269,3503,3648,3996,
#Partially deleted in new
chr22	23652859	23690293	chr22:23652859-23690293	0	-	23652859	23652859	8553170	5	85,136,143,158,62,	0,7005,30865,33978,37372,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	23653168	23717347	chr22:23653168-23717347	3	-	23653168	23653168	8553170	12	184,136,143,165,125,1399,113,112,82,156,186,240,	0,6696,30556,33662,37063,40950,52260,55961,56617,61018,61840,63939,
#Partially deleted in new
chr22	23653169	23686914	chr22:23653169-23686914	0	-	23653169	23653169	8553170	3	183,136,84,	0,6695,33661,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	23658093	23693185	chr22:23658093-23693185	5	-	23658093	23658093	16724991	3	1907,143,2954,	0,25631,32138,
#Partially deleted in new
chr22	23659868	23717295	chr22:23659868-23717295	5	-	23659868	23659868	16724991	5	136,133,185,183,210,	0,54342,54648,55143,57217,
#Partially deleted in new
chr22	23659875	23690491	chr22:23659875-23690491	4	-	23659875	23659875	16724991	3	125,158,260,	0,26962,30356,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	23678609	23690297	chr22:23678609-23690297	4	-	23678609	23678609	16724991	3	233,143,62,	0,5115,11626,
#Partially deleted in new
chr22	23683724	23687980	chr22:23683724-23687980	4	-	23683724	23683724	16724991	3	143,165,346,	0,3106,3910,
#Partially deleted in new
chr22	23683743	23687819	chr22:23683743-23687819	4	-	23683743	23683743	16724991	3	124,206,185,	0,3046,3891,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr22	23688135	23699176	chr22:23688135-23699176	0	+	23692030	23696668	789624	14	170,181,1436,194,323,216,104,70,167,75,75,24,122,622,	0,586,2638,4199,4533,5623,6211,6814,8192,8478,9035,9702,10076,10419,
#Partially deleted in new
chr22	23688141	23699176	chr22:23688141-23699176	1	+	23692703	23698883	789624	12	710,174,194,323,216,104,70,75,75,24,122,333,	0,2632,4193,4527,5617,6205,6808,8472,9029,9696,10070,10702,
#Partially deleted in new
chr22	23690860	23699176	chr22:23690860-23699176	3	+	23692030	23698883	789624	11	1349,194,323,216,104,70,75,75,24,122,333,	0,1474,1808,2898,3486,4089,5753,6310,6977,7351,7983,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr22	23690860	23698651	chr22:23690860-23698651	1	+	23692703	23698651	789624	11	1349,194,323,216,104,70,75,75,24,122,97,	0,1474,1808,2898,3486,4089,5753,6310,6977,7351,7694,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	23690860	23699171	chr22:23690860-23699171	1	+	23692703	23698968	789624	12	1349,194,323,216,104,70,75,75,24,122,134,328,	0,1474,1808,2898,3486,4089,5753,6310,6977,7351,7554,7983,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	23691305	23698978	chr22:23691305-23698978	0	+	23692030	23698978	789624	12	904,194,323,216,104,70,75,75,24,122,91,135,	0,1029,1363,2453,3041,3644,5308,5865,6532,6906,7249,7538,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	23691305	23698978	chr22:23691305-23698978	0	+	23691305	23691305	8553170	10	1223,323,216,104,70,75,75,24,122,424,	0,1363,2453,3041,3644,5308,5865,6532,6906,7249,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr22	23691305	23699176	chr22:23691305-23699176	0	+	23691305	23691305	8553170	11	1223,323,216,104,70,75,75,24,122,134,333,	0,1363,2453,3041,3644,5308,5865,6532,6906,7109,7538,
#Partially deleted in new
chr22	23696483	23699176	chr22:23696483-23699176	0	+	23696483	23698883	789624	5	205,75,24,122,333,	0,687,1354,1728,2360,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	23698069	23698544	chr22:23698069-23698544	0	+	23698069	23698069	8553170	2	264,130,	0,345,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	23700788	23717267	chr22:23700788-23717267	6	-	23700788	23700788	16724991	5	57,113,112,82,237,	0,4640,8341,8997,16242,
#Partially deleted in new
chr22	23709840	23717327	chr22:23709840-23717327	4	-	23709840	23709840	16724991	4	27,108,186,297,	0,4346,5168,7190,
#Partially deleted in new
chr22	23714185	23717356	chr22:23714185-23717356	5	-	23714185	23714185	16724991	3	157,151,249,	0,823,2922,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	23738677	23751092	chr22:23738677-23751092	3	-	23743799	23745140	789624	2	6542,382,	0,12033,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	23752742	23754468	chr22:23752742-23754468	3	-	23752875	23754363	789624	2	456,154,	0,1572,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	23752742	23754409	chr22:23752742-23754409	1	-	23752875	23754363	789624	2	408,95,	0,1572,
#Partially deleted in new
chr22	23763020	23765861	chr22:23763020-23765861	0	+	23763020	23763020	8553170	3	311,87,1623,	0,1066,1218,
#Partially deleted in new
chr22	23763020	23764363	chr22:23763020-23764363	0	+	23763020	23763020	8553170	2	311,277,	0,1066,
#Partially deleted in new
chr22	23763053	23765861	chr22:23763053-23765861	3	+	23763306	23765732	789624	6	278,87,138,75,110,141,	0,1033,1206,1585,1739,2667,
#Partially deleted in new
chr22	23763206	23765861	chr22:23763206-23765861	1	+	23763306	23765754	789624	6	125,87,143,75,110,141,	0,880,1053,1432,1586,2514,
#Partially deleted in new
chr22	23763222	23765861	chr22:23763222-23765861	1	+	23763306	23765728	789624	6	109,87,153,75,81,141,	0,864,1037,1416,2154,2498,
#Partially deleted in new
chr22	23765833	23767942	chr22:23765833-23767942	1	-	23766006	23767874	789624	4	193,169,220,109,	0,294,1540,2000,
#Partially deleted in new
chr22	23765833	23768443	chr22:23765833-23768443	3	-	23766006	23767874	789624	4	193,148,220,610,	0,294,1540,2000,
#Partially deleted in new
chr22	23765833	23767876	chr22:23765833-23767876	1	-	23766148	23767874	789624	3	193,148,43,	0,294,2000,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	23765873	23766464	chr22:23765873-23766464	0	-	23765873	23765873	8553170	2	153,337,	0,254,
#Partially deleted in new
chr22	23765934	23767920	chr22:23765934-23767920	0	-	23766183	23767874	789624	4	92,148,167,87,	0,193,1439,1899,
#Partially deleted in new
chr22	23768225	23784316	chr22:23768225-23784316	0	+	23768225	23768225	8553170	8	568,182,1316,134,242,217,258,906,	0,2892,10961,12356,12633,12967,14000,15185,
#Partially deleted in new
chr22	23768642	23781007	chr22:23768642-23781007	0	+	23768642	23768642	8553170	6	151,121,230,144,134,149,	0,2544,10544,11716,11939,12216,
#Partially deleted in new
chr22	23768659	23780666	chr22:23768659-23780666	0	+	23768659	23768659	8553170	4	134,230,144,85,	0,10527,11699,11922,
#Partially deleted in new
chr22	23772818	23784316	chr22:23772818-23784316	3	+	23772870	23783544	789624	8	160,230,144,134,242,217,258,906,	0,6368,7540,7763,8040,8374,9407,10592,
#Partially deleted in new
chr22	23772845	23780484	chr22:23772845-23780484	0	+	23772870	23779420	789624	3	133,278,126,	0,6341,7513,
#Partially deleted in new
chr22	23772845	23779697	chr22:23772845-23779697	0	+	23772845	23772845	8553170	2	133,511,	0,6341,
#Partially deleted in new
chr22	23772848	23784316	chr22:23772848-23784316	0	+	23772870	23782405	789624	8	130,182,144,134,242,217,116,906,	0,6338,7510,7733,8010,8344,9519,10562,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	23777640	23781100	chr22:23777640-23781100	0	+	23777640	23777640	8553170	5	168,230,144,134,242,	0,1546,2718,2941,3218,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	23780879	23783441	chr22:23780879-23783441	0	+	23780879	23781861	789624	4	221,217,696,31,	0,313,908,2531,
#Partially deleted in new
chr22	23780940	23782315	chr22:23780940-23782315	0	+	23780940	23780940	8553170	2	469,90,	0,1285,
#Deleted in new
chr22	23780956	23781751	chr22:23780956-23781751	0	+	23780956	23780956	8553170	2	144,559,	0,236,
#Partially deleted in new
chr22	23781263	23782628	chr22:23781263-23782628	0	+	23781263	23781263	8553170	2	146,403,	0,962,
#Partially deleted in new
chr22	23781813	23782483	chr22:23781813-23782483	0	+	23781813	23781813	8553170	2	112,258,	0,412,
#Partially deleted in new
chr22	23786930	23834540	chr22:23786930-23834540	1	+	23787169	23834180	0	9	332,112,130,138,128,167,191,132,400,	0,4825,6628,14013,16364,29839,38294,46641,47210,
#Partially deleted in new
chr22	23786945	23838008	chr22:23786945-23838008	3	+	23787169	23834180	0	9	317,139,130,138,128,167,191,132,3868,	0,4810,6613,13998,16349,29824,38279,46626,47195,
#Partially deleted in new
chr22	23786962	23834505	chr22:23786962-23834505	1	+	23787169	23834180	789624	9	300,112,130,192,128,167,191,132,365,	0,4793,6596,13981,16332,29807,38262,46609,47178,
#Partially deleted in new
chr22	23786977	23802275	chr22:23786977-23802275	0	+	23786977	23786977	8553170	3	285,1933,1332,	0,4778,13966,
#Partially deleted in new
chr22	23786979	23802060	chr22:23786979-23802060	0	+	23786979	23786979	8553170	4	283,112,130,1117,	0,4776,6579,13964,
#Partially deleted in new
chr22	23786982	23834505	chr22:23786982-23834505	0	+	23787169	23803300	789624	7	280,138,128,167,191,132,365,	0,13961,16312,29787,38242,46589,47158,
#Partially deleted in new
chr22	23787000	23816927	chr22:23787000-23816927	0	+	23787169	23801397	789624	6	262,139,130,1021,128,158,	0,4755,6558,13943,16294,29769,
#Partially deleted in new
chr22	23787010	23834501	chr22:23787010-23834501	1	+	23787169	23834180	789624	8	252,139,130,128,167,191,132,361,	0,4745,6548,16284,29759,38214,46561,47130,
#Partially deleted in new
chr22	23787016	23803401	chr22:23787016-23803401	0	+	23787169	23803401	789624	4	246,112,130,107,	0,4739,6542,16278,
#Partially deleted in new
chr22	23787026	23816833	chr22:23787026-23816833	0	+	23787169	23816833	789624	6	236,139,130,192,128,64,	0,4729,6532,13917,16268,29743,
#Partially deleted in new
chr22	23787181	23834270	chr22:23787181-23834270	0	+	23787181	23787181	8553170	8	81,139,130,2479,312,191,132,130,	0,4574,6377,13762,29443,38043,46390,46959,
#Partially deleted in new
chr22	23787201	23804383	chr22:23787201-23804383	0	+	23787201	23787201	8553170	5	61,139,130,138,1089,	0,4554,6357,13742,16093,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	23787257	23826248	chr22:23787257-23826248	0	+	23787257	23787257	8553170	7	5,139,130,138,128,167,1024,	0,4498,6301,13686,16037,29512,37967,
#Partially deleted in new
chr22	23791800	23834358	chr22:23791800-23834358	0	+	23791800	23801397	789624	8	67,130,1021,128,167,191,132,218,	0,1758,9143,11494,24969,33424,41771,42340,
#Partially deleted in new
chr22	23791810	23803322	chr22:23791810-23803322	0	+	23791810	23803322	789624	4	84,130,27,28,	0,1748,9133,11484,
#Partially deleted in new
chr22	23791810	23803322	chr22:23791810-23803322	0	+	23791810	23803322	789624	4	57,130,27,28,	0,1748,9133,11484,
#Deleted in new
chr22	23801298	23803629	chr22:23801298-23803629	0	+	23801298	23801397	789624	2	666,335,	0,1996,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	23802000	23818669	chr22:23802000-23818669	0	+	23802000	23802000	8553170	2	1422,1900,	0,14769,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	23802546	23818580	chr22:23802546-23818580	0	+	23802546	23802546	8553170	3	876,167,242,	0,14223,15792,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	23814990	23833587	chr22:23814990-23833587	0	+	23814990	23814990	8553170	3	1946,191,16,	0,10234,18581,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	23823107	23834353	chr22:23823107-23834353	0	+	23823107	23823107	8553170	3	2308,132,213,	0,10464,11033,
#Deleted in new
chr22	23834502	23839128	chr22:23834502-23839128	0	-	23834502	23834502	8553170	5	2652,73,308,74,418,	0,3156,3635,4061,4208,
#Deleted in new
chr22	23834502	23839006	chr22:23834502-23839006	1	-	23837059	23838987	789624	5	2715,39,94,153,112,	0,3313,3849,4061,4392,
#Deleted in new
chr22	23834502	23839006	chr22:23834502-23839006	1	-	23834826	23838987	789624	7	430,91,196,94,74,66,112,	0,2561,3156,3849,4061,4208,4392,
#Deleted in new
chr22	23834502	23836514	chr22:23834502-23836514	0	-	23834502	23834502	8553170	2	430,215,	0,1797,
#Deleted in new
chr22	23836464	23837684	chr22:23836464-23837684	0	-	23836464	23836464	8553170	3	55,91,26,	0,599,1194,
#Deleted in new
chr22	23836733	23839004	chr22:23836733-23839004	3	-	23836868	23838987	789624	7	229,91,196,94,74,66,110,	0,330,925,1618,1830,1977,2161,
#Deleted in new
chr22	23836733	23837698	chr22:23836733-23837698	0	-	23836733	23836733	8553170	3	229,91,52,	0,330,913,
#Deleted in new
chr22	23836733	23839012	chr22:23836733-23839012	1	-	23837059	23838987	789624	6	421,196,94,74,66,118,	0,925,1618,1830,1977,2161,
#Deleted in new
chr22	23836733	23838203	chr22:23836733-23838203	0	-	23836733	23836733	8553170	4	229,91,73,66,	0,330,925,1404,
#Deleted in new
chr22	23836766	23839004	chr22:23836766-23839004	0	-	23836766	23836766	8553170	3	388,73,294,	0,892,1944,
#Partially deleted in new
chr22	23856426	23857039	chr22:23856426-23857039	3	-	23856426	23856426	8553170	1	613,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	23856702	23886309	chr22:23856702-23886309	3	+	23856970	23884849	789624	12	289,99,161,125,130,149,188,111,102,76,128,1661,	0,5401,11778,18414,20339,21018,25756,26056,27069,27246,27599,27946,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	23856862	23870182	chr22:23856862-23870182	1	+	23856970	23870041	789624	4	129,99,161,175,	0,5241,11618,13145,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	23856871	23885536	chr22:23856871-23885536	1	+	23857489	23884849	789624	13	120,111,99,161,125,130,149,188,111,102,76,128,888,	0,549,5232,11609,18245,20170,20849,25587,25887,26900,27077,27430,27777,
#Partially deleted in new
chr22	23856933	23877328	chr22:23856933-23877328	1	+	23856970	23877175	789624	5	58,99,161,125,287,	0,5170,11547,18183,20108,
#Partially deleted in new
chr22	23856945	23882952	chr22:23856945-23882952	0	+	23856945	23856945	789624	9	46,111,99,161,125,130,149,188,194,	0,475,5158,11535,18171,20096,20775,25513,25813,
#Partially deleted in new
chr22	23856950	23882951	chr22:23856950-23882951	0	+	23856950	23856950	8553170	8	41,111,99,161,125,130,188,193,	0,470,5153,11530,18166,20091,25508,25808,
#Partially deleted in new
chr22	23856956	23884933	chr22:23856956-23884933	0	+	23856970	23875136	789624	11	35,99,161,121,130,188,111,102,76,128,285,	0,5147,11524,18164,20085,25502,25802,26815,26992,27345,27692,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	23856956	23885551	chr22:23856956-23885551	0	+	23856956	23856956	8553170	9	35,99,161,121,130,188,111,658,903,	0,5147,11524,18164,20085,25502,25802,26815,27692,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	23856961	23866806	chr22:23856961-23866806	0	+	23856961	23856961	8553170	4	30,111,99,384,	0,459,5142,9461,
#Partially deleted in new
chr22	23856999	23875211	chr22:23856999-23875211	0	+	23856999	23856999	8553170	4	532,99,161,95,	0,5104,11481,18117,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr22	23856999	23886112	chr22:23856999-23886112	1	+	23857489	23884946	789624	11	532,99,161,125,130,149,188,111,151,128,1490,	0,5104,11481,18117,20042,20721,25459,25759,26874,27302,27623,
#Partially deleted in new
chr22	23857335	23862325	chr22:23857335-23862325	0	+	23857335	23857335	8553170	2	196,222,	0,4768,
#Partially deleted in new
chr22	23857416	23877287	chr22:23857416-23877287	0	+	23857489	23875136	789624	5	115,99,161,121,246,	0,4687,11064,17704,19625,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	23857470	23875189	chr22:23857470-23875189	0	+	23857489	23867740	789624	5	61,99,165,161,73,	0,4633,10264,11010,17646,
#Partially deleted in new
chr22	23857874	23868796	chr22:23857874-23868796	0	+	23857874	23857874	8553170	3	155,99,316,	0,4229,10606,
#Partially deleted in new
chr22	23857894	23877172	chr22:23857894-23877172	0	+	23857999	23875136	789624	5	135,99,161,157,131,	0,4209,10586,17190,19147,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	23857918	23885553	chr22:23857918-23885553	0	+	23858135	23877517	789624	12	238,99,161,125,130,485,188,111,102,76,128,905,	0,4185,10562,17198,19123,19466,24540,24840,25853,26030,26383,26730,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	23857960	23885536	chr22:23857960-23885536	0	+	23857960	23857960	8553170	9	69,99,161,125,130,188,1266,128,888,	0,4143,10520,17156,19081,24498,24798,26341,26688,
#Partially deleted in new
chr22	23857962	23884867	chr22:23857962-23884867	1	+	23857999	23884849	789624	12	67,99,161,125,130,149,188,111,102,76,128,219,	0,4141,10518,17154,19079,19758,24496,24796,25809,25986,26339,26686,
#Partially deleted in new
chr22	23862187	23895223	chr22:23862187-23895223	3	+	23862187	23895065	789624	6	15,161,125,130,173,184,	0,6293,12929,14854,32584,32852,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	23865247	23873277	chr22:23865247-23873277	3	-	23865247	23865247	8553170	1	8030,	0,
#Partially deleted in new
chr22	23875159	23882952	chr22:23875159-23882952	0	+	23875159	23875159	8553170	4	82,130,152,194,	0,1882,7335,7599,
#Partially deleted in new
chr22	23877857	23884784	chr22:23877857-23884784	0	+	23877857	23877857	8553170	6	12,188,111,76,128,136,	0,4601,4901,6091,6444,6791,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	23879492	23879790	chr22:23879492-23879790	3	-	23879492	23879492	8553170	1	298,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	23880408	23883307	chr22:23880408-23883307	0	+	23880408	23880408	8553170	2	2238,549,	0,2350,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	23882959	23885536	chr22:23882959-23885536	0	+	23882959	23882959	8553170	2	1470,888,	0,1689,
#Deleted in new
chr22	23894003	23895226	chr22:23894003-23895226	3	+	23894474	23895106	0	3	579,173,187,	0,768,1036,
#Deleted in new
chr22	23894425	23898930	chr22:23894425-23898930	3	-	23894425	23894425	789624	3	1107,282,87,	0,1403,4418,
#Deleted in new
chr22	23894449	23895227	chr22:23894449-23895227	0	+	23894449	23894449	8553170	2	133,456,	0,322,
#Deleted in new
chr22	23894697	23895227	chr22:23894697-23895227	0	+	23894697	23894697	8553170	2	247,188,	0,342,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	23901431	23907068	chr22:23901431-23907068	3	-	23901431	23901431	8553170	1	5637,	0,
#Partially deleted in new
chr22	23926899	23929574	chr22:23926899-23929574	7	+	23926899	23926899	16724991	3	430,972,361,	0,727,2314,
#Partially deleted in new
chr22	23939997	23942798	chr22:23939997-23942798	7	+	23939997	23939997	16724991	3	154,180,198,	0,1074,2603,
#Partially deleted in new
chr22	23949917	23954042	chr22:23949917-23954042	7	+	23949917	23949917	16724991	3	88,45,156,	0,2256,3969,
#Partially deleted in new
chr22	23957413	23961186	chr22:23957413-23961186	3	-	23957722	23961131	0	5	519,174,151,88,167,	0,871,1137,2880,3606,
#Partially deleted in new
chr22	23957618	23961153	chr22:23957618-23961153	1	-	23957722	23961131	789624	5	314,132,151,88,134,	0,708,932,2675,3401,
#Deleted in new
chr22	23963779	23964374	chr22:23963779-23964374	7	+	23963779	23963779	16724991	2	139,115,	0,480,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	23966900	23972532	chr22:23966900-23972532	3	+	23966914	23971406	789624	3	122,176,1247,	0,485,4385,
#Deleted in new
chr22	23969210	23969873	chr22:23969210-23969873	3	+	23969210	23969210	8553170	1	663,	0,
#Partially deleted in new
chr22	23971364	23979828	chr22:23971364-23979828	3	-	23971550	23974414	0	4	259,176,133,103,	0,2403,2942,8361,
#Partially deleted in new
chr22	23971364	23974584	chr22:23971364-23974584	1	-	23971550	23974414	0	3	259,176,278,	0,2403,2942,
#Partially deleted in new
chr22	23971369	23973183	chr22:23971369-23973183	0	-	23971550	23973183	789624	2	254,79,	0,1735,
#Partially deleted in new
chr22	23971377	23980469	chr22:23971377-23980469	3	-	23971550	23976892	789624	5	246,176,133,192,58,	0,2390,2929,5498,9034,
#Deleted in new
chr22	23973080	23974491	chr22:23973080-23974491	0	-	23973080	23973080	8553170	2	863,185,	0,1226,
#Deleted in new
chr22	23973103	23974459	chr22:23973103-23974459	1	-	23973126	23974414	789624	3	240,176,153,	0,664,1203,
#Deleted in new
chr22	23973103	23974459	chr22:23973103-23974459	1	-	23973307	23974414	0	3	244,176,153,	0,664,1203,
#Partially deleted in new
chr22	23976871	23991421	chr22:23976871-23991421	7	-	23976871	23976871	16724991	5	196,177,151,89,86,	0,529,10447,12255,14464,
#Deleted in new
chr22	23976903	23977585	chr22:23976903-23977585	7	-	23976903	23976903	16724991	2	166,181,	0,501,
#Partially deleted in new
chr22	23980057	23983710	chr22:23980057-23983710	1	+	23980197	23983606	8553170	5	252,88,151,132,314,	0,890,2570,2813,3339,
#Partially deleted in new
chr22	23980057	23983915	chr22:23980057-23983915	1	+	23980197	23983606	789624	5	252,88,151,174,519,	0,890,2570,2813,3339,
#Partially deleted in new
chr22	23980122	23983911	chr22:23980122-23983911	3	+	23980197	23983606	789624	6	187,88,151,174,60,452,	0,825,2505,2748,3274,3337,
#Partially deleted in new
chr22	23998400	24005361	chr22:23998400-24005361	0	-	24000244	24005356	789624	4	339,177,88,117,	0,1674,5359,6844,
#Partially deleted in new
chr22	23998400	24005409	chr22:23998400-24005409	3	-	23998541	24005356	789624	5	339,177,151,88,165,	0,1674,2774,5359,6844,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	23998489	24005453	chr22:23998489-24005453	0	-	23998489	23998489	8553170	4	250,177,88,1273,	0,1585,5270,5691,
#Partially deleted in new
chr22	24000149	24005361	chr22:24000149-24005361	0	-	24004305	24005356	789624	4	102,88,142,117,	0,3610,4031,5095,
#Partially deleted in new
chr22	24006304	24008258	chr22:24006304-24008258	7	-	24006304	24006304	16724991	3	85,151,31,	0,699,1923,
#Partially deleted in new
chr22	24011191	24056304	chr22:24011191-24056304	0	+	24035517	24056304	789624	9	176,77,93,114,181,130,150,287,113,	0,24252,24897,27156,31712,37899,39633,43681,45000,
#Partially deleted in new
chr22	24011314	24178628	chr22:24011314-24178628	3	+	24035517	24178196	0	37	53,77,93,114,135,181,130,150,287,169,137,218,79,188,153,195,243,157,116,162,207,146,262,261,152,179,183,332,114,164,97,675,75,283,165,314,576,	0,24129,24774,27033,29824,31589,37776,39510,43558,44877,47912,48609,50632,51644,52720,55672,59485,61039,64854,71913,73264,73691,76137,80268,84616,86699,102251,108052,122987,153085,154215,155324,157132,160398,164796,166189,166738,
#Partially deleted in new
chr22	24011314	24178628	chr22:24011314-24178628	1	+	24035517	24178196	789624	36	53,77,93,114,135,181,130,287,169,137,218,79,188,153,195,243,157,116,162,207,146,262,261,152,179,183,332,114,164,97,675,75,283,165,314,576,	0,24129,24774,27033,29824,31589,37776,43558,44877,47912,48609,50632,51644,52720,55672,59485,61039,64854,71913,73264,73691,76137,80268,84616,86699,102251,108052,122987,153085,154215,155324,157132,160398,164796,166189,166738,
#Partially deleted in new
chr22	24011347	24178628	chr22:24011347-24178628	1	+	24035517	24178196	0	36	20,77,93,114,135,181,130,287,169,137,218,79,188,153,195,243,157,116,162,207,146,262,261,152,92,183,332,114,164,97,675,75,283,165,314,576,	0,24096,24741,27000,29791,31556,37743,43525,44844,47879,48576,50599,51611,52687,55639,59452,61006,64821,71880,73231,73658,76104,80235,84583,86666,102218,108019,122954,153052,154182,155291,157099,160365,164763,166156,166705,
#Partially deleted in new
chr22	24011415	24056318	chr22:24011415-24056318	0	+	24035517	24056318	789624	9	313,77,93,114,181,130,150,287,127,	0,24028,24673,26932,31488,37675,39409,43457,44776,
#Partially deleted in new
chr22	24011417	24178628	chr22:24011417-24178628	1	+	24035517	24178196	0	37	311,77,93,114,135,181,130,150,287,169,137,218,79,188,153,195,243,157,116,162,207,146,262,261,152,179,183,332,114,164,97,675,75,283,165,314,576,	0,24026,24671,26930,29721,31486,37673,39407,43455,44774,47809,48506,50529,51541,52617,55569,59382,60936,64751,71810,73161,73588,76034,80165,84513,86596,102148,107949,122884,152982,154112,155221,157029,160295,164693,166086,166635,
#Deleted in new
chr22	24055067	24056525	chr22:24055067-24056525	0	+	24055067	24055067	8553170	2	92,334,	0,1124,
#Deleted in new
chr22	24067004	24071183	chr22:24067004-24071183	0	+	24067004	24067004	8553170	2	177,384,	0,3795,
#Partially deleted in new
chr22	24087587	24092013	chr22:24087587-24092013	0	+	24087587	24087587	8553170	2	126,431,	0,3995,
#Partially deleted in new
chr22	24098112	24119606	chr22:24098112-24119606	0	+	24098112	24098112	8553170	3	170,183,240,	0,15453,21254,
#Deleted in new
chr22	24101688	24103354	chr22:24101688-24103354	3	+	24101688	24101688	8553170	3	49,191,318,	0,523,1348,
#Partially deleted in new
chr22	24155837	24178627	chr22:24155837-24178627	1	+	24156055	24178196	789624	8	239,164,97,675,75,283,314,575,	0,8562,9692,10801,12609,15875,21666,22215,
#Deleted in new
chr22	24156532	24164489	chr22:24156532-24164489	0	+	24156532	24156532	8553170	4	44,77,150,90,	0,3797,5533,7867,
#Deleted in new
chr22	24167222	24173398	chr22:24167222-24173398	0	+	24167222	24167222	8553170	4	91,75,283,322,	0,1224,4490,5854,
#Deleted in new
chr22	24175778	24177538	chr22:24175778-24177538	0	+	24175778	24175778	8553170	2	497,35,	0,1725,
#Deleted in new
chr22	24181258	24189110	chr22:24181258-24189110	3	+	24181519	24188436	789624	15	337,211,152,168,175,202,86,269,144,159,249,273,177,103,699,	0,1798,2236,2877,3507,3835,4227,4402,4757,4998,5943,6312,6700,6966,7153,
#Deleted in new
chr22	24182576	24189106	chr22:24182576-24189106	0	+	24182576	24182576	8553170	11	691,809,175,202,86,269,144,1587,177,103,695,	0,918,2189,2517,2909,3084,3439,3680,5382,5648,5835,
#Partially deleted in new
chr22	24219653	24245078	chr22:24219653-24245078	1	-	24219969	24244725	789624	11	463,111,167,107,191,137,147,158,196,131,526,	0,5342,5591,5892,6422,6977,11730,12397,13169,14220,24899,
#Partially deleted in new
chr22	24219653	24245142	chr22:24219653-24245142	3	-	24219969	24244725	789624	12	463,111,167,107,191,137,147,158,196,96,131,590,	0,5342,5591,5892,6422,6977,11730,12397,13169,13844,14220,24899,
#Partially deleted in new
chr22	24219659	24245059	chr22:24219659-24245059	1	-	24219969	24244725	789624	12	457,111,170,107,191,137,147,158,196,96,131,507,	0,5336,5585,5886,6416,6971,11724,12391,13163,13838,14214,24893,
#Partially deleted in new
chr22	24219659	24226112	chr22:24219659-24226112	0	-	24219969	24226112	789624	6	457,93,111,167,107,37,	0,832,5336,5585,5886,6416,
#Partially deleted in new
chr22	24232972	24245082	chr22:24232972-24245082	0	-	24232972	24244725	789624	2	46,530,	0,11580,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	24241088	24245108	chr22:24241088-24245108	0	-	24241088	24241088	8553170	1	4020,	0,
#Deleted in new
chr22	24248073	24249466	chr22:24248073-24249466	7	-	24248073	24248073	16724991	5	148,154,58,128,176,	0,449,701,857,1217,
#Partially deleted in new
chr22	24251827	24265525	chr22:24251827-24265525	7	+	24251827	24251827	16724991	7	1571,207,63,107,129,915,2026,	0,4925,6169,6939,9080,9865,11672,
#Deleted in new
chr22	24252004	24253289	chr22:24252004-24253289	5	+	24252004	24252004	16724991	1	1285,	0,
#Partially deleted in new
chr22	24256633	24261900	chr22:24256633-24261900	4	+	24256633	24256633	16724991	4	326,107,129,208,	0,2133,4274,5059,
#Partially deleted in new
chr22	24259928	24263764	chr22:24259928-24263764	7	-	24259928	24259928	16724991	5	90,163,106,135,197,	0,810,1449,2500,3639,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	24269345	24270134	chr22:24269345-24270134	7	-	24269345	24269345	16724991	2	330,126,	0,663,
#Partially deleted in new
chr22	24270816	24417739	chr22:24270816-24417739	3	+	24302231	24414623	789624	16	167,190,154,1631,208,74,176,164,92,91,84,157,103,117,60,3206,	0,31378,42496,50471,53403,58029,59439,63593,67569,76269,92444,94659,98401,140771,141831,143717,
#Partially deleted in new
chr22	24270821	24330401	chr22:24270821-24330401	0	+	24302231	24330401	789624	7	162,190,154,1631,208,74,146,	0,31373,42491,50466,53398,58024,59434,
#Partially deleted in new
chr22	24270839	24417740	chr22:24270839-24417740	1	+	24302231	24414623	789624	17	144,104,190,154,1631,208,74,176,164,92,91,84,157,103,117,60,3207,	0,5860,31355,42473,50448,53380,58006,59416,63570,67546,76246,92421,94636,98378,140748,141808,143694,
#Partially deleted in new
chr22	24270882	24324304	chr22:24270882-24324304	0	+	24270882	24270882	8553170	5	101,190,154,36,85,	0,31312,42430,50405,53337,
#Partially deleted in new
chr22	24270882	24414773	chr22:24270882-24414773	1	+	24302231	24414623	789624	15	101,190,154,1631,208,74,176,164,92,91,84,157,103,60,240,	0,31312,42430,50405,53337,57963,59373,63527,67503,76203,92378,94593,98335,141765,143651,
#Partially deleted in new
chr22	24304395	24321688	chr22:24304395-24321688	0	+	24313342	24321688	789624	3	57,154,401,	0,8917,16892,
#Deleted in new
chr22	24412159	24414752	chr22:24412159-24414752	0	+	24412159	24412159	8553170	2	548,219,	0,2374,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	24417878	24433192	chr22:24417878-24433192	0	+	24417878	24417878	8553170	3	381,106,62,	0,14742,15252,
#Partially deleted in new
chr22	24422487	24433208	chr22:24422487-24433208	0	+	24422487	24422487	8553170	4	212,187,101,78,	0,1283,9046,10643,
#Partially deleted in new
chr22	24423596	24433667	chr22:24423596-24433667	0	+	24433404	24433667	789624	2	32,537,	0,9534,
#Partially deleted in new
chr22	24423596	24442356	chr22:24423596-24442356	3	+	24433404	24441489	0	3	32,606,1774,	0,9534,16986,
#Partially deleted in new
chr22	24423630	24433729	chr22:24423630-24433729	0	+	24433404	24433729	789624	2	327,599,	0,9500,
#Partially deleted in new
chr22	24424397	24433423	chr22:24424397-24433423	0	+	24433404	24433423	8553170	3	159,106,293,	0,8223,8733,
#Partially deleted in new
chr22	24424408	24441345	chr22:24424408-24441345	0	+	24433404	24441345	789624	3	148,606,763,	0,8722,16174,
#Partially deleted in new
chr22	24427561	24442360	chr22:24427561-24442360	1	+	24433404	24441489	0	3	185,606,1778,	0,5569,13021,
#Partially deleted in new
chr22	24427561	24433654	chr22:24427561-24433654	0	+	24433404	24433654	789624	2	165,524,	0,5569,
#Partially deleted in new
chr22	24427626	24441173	chr22:24427626-24441173	0	+	24427626	24427626	8553170	2	100,591,	0,12956,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	24429205	24494800	chr22:24429205-24494800	3	-	24429205	24429205	789624	7	1159,666,173,149,128,171,111,	0,1691,3056,12786,42562,45777,65484,
#Deleted in new
chr22	24432118	24433492	chr22:24432118-24433492	0	+	24433404	24433492	789624	3	250,106,362,	0,502,1012,
#Partially deleted in new
chr22	24432118	24442356	chr22:24432118-24442356	1	+	24433404	24441489	0	4	250,106,606,1774,	0,502,1012,8464,
#Partially deleted in new
chr22	24432118	24442356	chr22:24432118-24442356	1	+	24433404	24441489	0	3	250,606,1774,	0,1012,8464,
#Deleted in new
chr22	24432166	24433597	chr22:24432166-24433597	0	+	24433404	24433597	789624	2	202,467,	0,964,
#Deleted in new
chr22	24432839	24433634	chr22:24432839-24433634	0	+	24433404	24433634	789624	2	56,504,	0,291,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	24438275	24495074	chr22:24438275-24495074	1	-	24438275	24438275	789624	8	483,274,149,118,319,128,171,385,	0,1018,3716,13935,22177,33492,36707,56414,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	24460496	24494795	chr22:24460496-24494795	0	-	24460496	24460496	8553170	3	275,171,106,	0,14486,34193,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	24494106	24526668	chr22:24494106-24526668	0	+	24495403	24502150	789624	9	1401,88,95,162,170,82,43,155,958,	0,8019,16642,19217,21094,26280,27879,29512,31604,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	24495059	24526585	chr22:24495059-24526585	3	+	24495403	24525794	789624	10	448,172,88,95,162,170,82,43,155,875,	0,5047,7066,15689,18264,20141,25327,26926,28559,30651,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	24495241	24503738	chr22:24495241-24503738	1	+	24495403	24502533	789624	4	266,172,88,1402,	0,4865,6884,7095,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	24516507	24518386	chr22:24516507-24518386	3	+	24516507	24516507	8553170	2	245,235,	0,1644,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	24519800	24528390	chr22:24519800-24528390	0	+	24519800	24519800	8553170	4	130,82,155,2680,	0,586,3818,5910,
#Partially deleted in new
chr22	24520173	24523700	chr22:24520173-24523700	0	+	24520173	24520173	8553170	3	295,43,82,	0,1812,3445,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	24540422	24555935	chr22:24540422-24555935	1	-	24543005	24555825	789624	6	2678,242,92,166,85,321,	0,3419,6491,7485,8494,15192,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	24540437	24555182	chr22:24540437-24555182	3	-	24543005	24554991	789624	6	2663,242,92,166,85,234,	0,3404,6476,7470,8479,14511,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	24540437	24555316	chr22:24540437-24555316	1	-	24543005	24554991	789624	6	2660,242,92,166,85,368,	0,3404,6476,7470,8479,14511,
#Partially deleted in new
chr22	24540441	24555171	chr22:24540441-24555171	0	-	24543005	24554991	789624	7	621,164,242,92,166,85,223,	0,2492,3400,6472,7466,8475,14507,
#Partially deleted in new
chr22	24540531	24548032	chr22:24540531-24548032	0	-	24540531	24540531	8553170	2	442,125,	0,7376,
#Partially deleted in new
chr22	24542397	24555935	chr22:24542397-24555935	1	-	24543005	24555825	789624	6	700,242,92,166,85,321,	0,1444,4516,5510,6519,13217,
#Partially deleted in new
chr22	24542686	24555089	chr22:24542686-24555089	1	-	24543072	24554991	789624	5	411,92,166,85,141,	0,4227,5221,6230,12262,
#Partially deleted in new
chr22	24542755	24555125	chr22:24542755-24555125	1	-	24543072	24554991	789624	5	345,92,166,85,177,	0,4158,5152,6161,12193,
#Deleted in new
chr22	24542829	24544083	chr22:24542829-24544083	0	-	24542829	24542829	8553170	2	268,242,	0,1012,
#Partially deleted in new
chr22	24544044	24547390	chr22:24544044-24547390	0	-	24544044	24544044	8553170	2	39,477,	0,2869,
#Partially deleted in new
chr22	24546916	24555859	chr22:24546916-24555859	0	-	24546916	24554991	789624	5	89,166,85,188,245,	0,991,2000,8032,8698,
#Partially deleted in new
chr22	24547715	24555124	chr22:24547715-24555124	0	-	24547715	24547715	8553170	3	358,85,176,	0,1201,7233,
#Deleted in new
chr22	24547772	24548961	chr22:24547772-24548961	0	-	24547772	24547772	8553170	2	301,45,	0,1144,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	24555502	24572772	chr22:24555502-24572772	3	+	24557674	24571977	0	4	569,144,193,857,	0,2154,12481,16413,
#Partially deleted in new
chr22	24555957	24558086	chr22:24555957-24558086	0	+	24555957	24555957	8553170	2	114,430,	0,1699,
#Partially deleted in new
chr22	24556006	24582052	chr22:24556006-24582052	1	+	24557674	24572061	0	5	65,144,193,44,121,	0,1650,11977,16011,25925,
#Partially deleted in new
chr22	24556008	24609980	chr22:24556008-24609980	0	+	24557674	24571977	0	7	63,144,193,102,127,70,16,	0,1648,11975,15907,27673,51945,53956,
#Partially deleted in new
chr22	24556031	24609150	chr22:24556031-24609150	0	+	24557674	24572026	789624	7	40,144,54,44,127,70,161,	0,1625,11952,15986,27650,51922,52958,
#Partially deleted in new
chr22	24583749	24628968	chr22:24583749-24628968	3	+	24611081	24628839	0	16	59,70,69,282,171,131,87,193,158,150,137,188,128,113,114,276,	0,24204,26215,26500,27325,31026,31291,36578,37163,39357,40030,43682,44102,44331,44525,44943,
#Partially deleted in new
chr22	24585619	24593063	chr22:24585619-24593063	3	-	24585885	24593039	789624	4	792,116,129,201,	0,2594,4201,7243,
#Partially deleted in new
chr22	24585619	24593066	chr22:24585619-24593066	0	-	24589244	24593039	789624	5	792,116,587,129,204,	0,2594,3059,4201,7243,
#Partially deleted in new
chr22	24585634	24593073	chr22:24585634-24593073	0	-	24585634	24585634	8553170	4	777,1180,129,857,	0,2579,4186,6582,
#Partially deleted in new
chr22	24585648	24593064	chr22:24585648-24593064	0	-	24592375	24593039	789624	5	763,116,129,207,202,	0,2565,4172,6568,7214,
#Partially deleted in new
chr22	24585661	24593079	chr22:24585661-24593079	0	-	24585661	24585661	8553170	4	750,1180,129,217,	0,2552,4159,7201,
#Partially deleted in new
chr22	24588681	24592285	chr22:24588681-24592285	0	-	24588681	24588681	8553170	3	584,129,69,	0,1139,3535,
#Partially deleted in new
chr22	24589164	24593034	chr22:24589164-24593034	0	-	24589164	24589164	8553170	2	785,172,	0,3698,
#Partially deleted in new
chr22	24589405	24593208	chr22:24589405-24593208	0	-	24589405	24589405	8553170	4	208,129,207,31,	0,415,2811,3772,
#Partially deleted in new
chr22	24594810	24611171	chr22:24594810-24611171	0	+	24611081	24611171	789624	5	76,70,72,282,97,	0,13143,15151,15439,16264,
#Partially deleted in new
chr22	24594813	24615107	chr22:24594813-24615107	0	+	24611081	24615107	789624	7	73,70,72,174,171,131,67,	0,13140,15148,15544,16261,19962,20227,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	24598053	24599398	chr22:24598053-24599398	3	+	24598053	24598053	8553170	2	153,211,	0,1134,
#Partially deleted in new
chr22	24603146	24628134	chr22:24603146-24628134	0	+	24611081	24628134	789624	14	381,70,69,174,171,131,87,193,158,150,137,188,128,54,	0,4807,6818,7211,7928,11629,11894,17181,17766,19960,20633,24285,24705,24934,
#Partially deleted in new
chr22	24603183	24614814	chr22:24603183-24614814	0	+	24611081	24614814	789624	5	152,70,174,171,39,	0,4770,7174,7891,11592,
#Partially deleted in new
chr22	24603197	24620468	chr22:24603197-24620468	0	+	24611081	24620468	789624	8	124,70,72,282,171,131,87,141,	0,4756,6764,7052,7877,11578,11843,17130,
#Partially deleted in new
chr22	24603200	24629002	chr22:24603200-24629002	1	+	24611081	24628839	0	16	327,70,69,282,171,131,87,193,158,150,137,188,128,113,114,310,	0,4753,6764,7049,7874,11575,11840,17127,17712,19906,20579,24231,24651,24880,25074,25492,
#Partially deleted in new
chr22	24603212	24611192	chr22:24603212-24611192	0	+	24611081	24611192	789624	5	109,70,69,174,115,	0,4741,6752,7145,7865,
#Partially deleted in new
chr22	24603212	24615127	chr22:24603212-24615127	0	+	24611081	24615127	789624	7	109,70,69,174,171,131,87,	0,4741,6752,7145,7862,11563,11828,
#Partially deleted in new
chr22	24603214	24614851	chr22:24603214-24614851	0	+	24611081	24614851	789624	6	313,69,87,118,168,76,	0,6750,7035,7199,7863,11561,
#Partially deleted in new
chr22	24603215	24629001	chr22:24603215-24629001	1	+	24611081	24628839	0	17	106,70,242,69,174,171,131,87,193,158,150,137,188,128,113,114,309,	0,4738,5774,6749,7142,7859,11560,11825,17112,17697,19891,20564,24216,24636,24865,25059,25477,
#Partially deleted in new
chr22	24603216	24614904	chr22:24603216-24614904	0	+	24611081	24614904	789624	4	105,174,171,129,	0,7141,7858,11559,
#Partially deleted in new
chr22	24603234	24615071	chr22:24603234-24615071	0	+	24611081	24615071	789624	8	293,70,69,87,77,171,131,31,	0,4719,6730,7015,7220,7840,11541,11806,
#Partially deleted in new
chr22	24607620	24615125	chr22:24607620-24615125	0	+	24611081	24615125	789624	6	112,70,174,171,131,85,	0,333,2737,3454,7155,7420,
#Partially deleted in new
chr22	24607638	24615078	chr22:24607638-24615078	0	+	24611081	24615078	789624	7	94,70,69,174,171,131,38,	0,315,2326,2719,3436,7137,7402,
#Partially deleted in new
chr22	24607658	24615093	chr22:24607658-24615093	0	+	24611081	24615093	789624	7	74,70,72,282,171,131,53,	0,295,2303,2591,3416,7117,7382,
#Partially deleted in new
chr22	24607663	24615125	chr22:24607663-24615125	0	+	24611081	24615125	789624	7	69,70,69,282,168,131,85,	0,290,2301,2586,3414,7112,7377,
#Partially deleted in new
chr22	24609461	24628996	chr22:24609461-24628996	0	+	24611081	24627490	0	15	572,87,77,171,131,87,193,158,150,137,210,128,113,114,304,	0,788,993,1613,5314,5579,10866,11451,13645,14318,17948,18390,18619,18813,19231,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	24610365	24615972	chr22:24610365-24615972	0	+	24610365	24610365	8553170	4	166,171,87,111,	0,709,4675,5496,
#Partially deleted in new
chr22	24614861	24620833	chr22:24614861-24620833	0	+	24614861	24614861	8553170	3	45,87,506,	0,179,5466,
#Partially deleted in new
chr22	24620407	24628976	chr22:24620407-24628976	0	+	24620407	24620407	8553170	8	113,150,137,210,128,113,114,284,	0,2699,3372,7002,7444,7673,7867,8285,
#Deleted in new
chr22	24627179	24628996	chr22:24627179-24628996	1	+	24627443	24628839	0	6	99,210,128,113,114,304,	0,230,672,901,1095,1513,
#Deleted in new
chr22	24627251	24628975	chr22:24627251-24628975	1	+	24627443	24628839	0	6	27,188,128,113,114,283,	0,180,600,829,1023,1441,
#Deleted in new
chr22	24627254	24629005	chr22:24627254-24629005	1	+	24627443	24628839	0	5	365,128,113,114,313,	0,597,826,1020,1438,
#Deleted in new
chr22	24627407	24628996	chr22:24627407-24628996	1	+	24627443	24628839	789624	4	212,128,308,304,	0,444,673,1285,
#Deleted in new
chr22	24627443	24628839	chr22:24627443-24628839	1	+	24627443	24628839	789624	5	176,128,56,150,147,	0,408,637,795,1249,
#Deleted in new
chr22	24627875	24628976	chr22:24627875-24628976	0	+	24627875	24627875	8553170	3	104,150,284,	0,363,817,
#Partially deleted in new
chr22	24632914	24647760	chr22:24632914-24647760	0	+	24632914	24632914	8553170	4	529,60,110,758,	0,11825,12721,14088,
#Partially deleted in new
chr22	24632953	24650012	chr22:24632953-24650012	3	+	24632953	24632953	789624	6	490,60,110,73,135,153,	0,11786,12682,14049,15244,16906,
#Deleted in new
chr22	24633271	24633443	chr22:24633271-24633443	7	+	24633271	24633271	16724991	1	172,	0,
#Partially deleted in new
chr22	24644790	24650832	chr22:24644790-24650832	7	+	24644790	24644790	16724991	7	9,110,140,135,106,163,90,	0,845,2212,3407,4487,5069,5952,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	24645170	24651657	chr22:24645170-24651657	3	-	24645170	24645170	8553170	4	2091,915,129,1499,	0,2983,4554,4988,
#Deleted in new
chr22	24647698	24650003	chr22:24647698-24650003	4	+	24647698	24647698	16724991	2	634,144,	0,2161,
#Partially deleted in new
chr22	24648245	24653356	chr22:24648245-24653356	5	+	24648245	24648245	16724991	3	87,163,351,	0,1614,4760,
#Deleted in new
chr22	24657480	24658765	chr22:24657480-24658765	7	-	24657480	24657480	16724991	1	1285,	0,
#Deleted in new
chr22	24686167	24686679	chr22:24686167-24686679	7	+	24686167	24686167	16724991	1	512,	0,
#Deleted in new
chr22	24686922	24688087	chr22:24686922-24688087	7	+	24686922	24686922	16724991	1	1165,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	24691121	24696003	chr22:24691121-24696003	3	-	24691121	24691121	8553170	2	440,157,	0,4725,
#Deleted in new
chr22	24703347	24703503	chr22:24703347-24703503	7	+	24703347	24703347	16724991	1	156,	0,
#Deleted in new
chr22	24712291	24712520	chr22:24712291-24712520	7	+	24712291	24712291	16724991	1	229,	0,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr22	24719033	24774716	chr22:24719033-24774716	3	-	24719471	24762499	789624	21	555,148,126,151,71,104,225,73,185,115,118,127,112,204,81,122,215,132,121,124,395,	0,714,4096,5853,6411,8916,9143,15050,16674,29873,30370,30659,32353,34980,35750,36750,37457,38874,40835,43364,55288,
#Partially deleted in new
chr22	24719033	24762523	chr22:24719033-24762523	1	-	24719471	24762499	789624	20	555,148,126,151,71,104,225,73,185,115,118,127,112,204,81,122,215,132,121,126,	0,714,4096,5853,6411,8916,9143,15050,16674,29873,30370,30659,32353,34980,35750,36750,37457,38874,40835,43364,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr22	24719249	24774477	chr22:24719249-24774477	1	-	24719471	24757935	789624	22	339,148,126,151,71,104,198,73,185,115,118,127,112,204,81,122,215,132,121,83,124,156,	0,498,3880,5637,6195,8700,8927,14834,16458,29657,30154,30443,32137,34764,35534,36534,37241,38658,40619,42629,43148,55072,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr22	24719249	24774477	chr22:24719249-24774477	1	-	24719471	24757935	789624	22	339,148,126,151,71,104,198,73,185,115,118,127,112,204,81,122,215,132,121,215,119,156,	0,498,3880,5637,6195,8700,8927,14834,16458,29657,30154,30443,32137,34764,35534,36534,37241,38658,40619,43057,50421,55072,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr22	24719471	24774720	chr22:24719471-24774720	0	-	24719471	24719471	8553170	21	117,148,126,151,71,104,198,73,185,115,118,127,112,204,81,122,215,132,121,124,399,	0,276,3658,5415,5973,8478,8705,14612,16236,29435,29932,30221,31915,34542,35312,36312,37019,38436,40397,42926,54850,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr22	24806168	24926844	chr22:24806168-24926844	1	+	24806325	24924274	789624	25	176,44,76,163,153,68,146,132,125,68,164,133,165,139,65,146,129,69,588,125,83,110,97,168,2659,	0,272,38728,41465,44111,48827,49116,49380,53547,60924,62207,62554,68246,70408,73293,77884,80431,89054,91803,95664,98936,106474,111489,113657,118017,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr22	24806268	24927578	chr22:24806268-24927578	1	+	24806325	24924274	789624	25	76,44,76,163,153,68,146,132,125,68,164,133,139,65,146,129,183,69,588,125,83,110,97,168,3393,	0,172,38628,41365,44011,48727,49016,49280,53447,60824,62107,62454,70308,73193,77784,80331,87162,88954,91703,95564,98836,106374,111389,113557,117917,
#Partially deleted in new
chr22	24806306	24814192	chr22:24806306-24814192	0	+	24806306	24806306	8553170	4	38,44,78,184,	0,134,7371,7702,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr22	24806318	24925137	chr22:24806318-24925137	3	+	24806325	24924274	789624	26	26,44,76,163,153,68,146,132,125,68,164,133,165,139,65,146,129,183,69,588,125,83,110,97,168,952,	0,122,38578,41315,43961,48677,48966,49230,53397,60774,62057,62404,68096,70258,73143,77734,80281,87112,88904,91653,95514,98786,106324,111339,113507,117867,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr22	24843459	24925137	chr22:24843459-24925137	0	+	24843459	24843459	8553170	22	1513,163,153,68,146,132,125,68,164,133,139,65,146,129,69,588,125,83,110,97,168,952,	0,4174,6820,11536,11825,12089,16256,23633,24916,25263,33117,36002,40593,43140,51763,54512,58373,61645,69183,74198,76366,80726,
#Partially deleted in new
chr22	24844740	24924593	chr22:24844740-24924593	0	+	24844740	24844740	8553170	23	232,163,153,68,146,132,125,68,164,133,139,65,146,129,183,69,588,125,83,110,97,168,408,	0,2893,5539,10255,10544,10808,14975,22352,23635,23982,31836,34721,39312,41859,48690,50482,53231,57092,60364,67902,72917,75085,79445,
#Deleted in new
chr22	24901146	24901214	chr22:24901146-24901214	3	-	24901146	24901146	8553170	1	68,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	24934953	24946694	chr22:24934953-24946694	3	-	24935332	24939535	789624	4	642,139,218,123,	0,3195,4381,11618,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	24935109	24946695	chr22:24935109-24946695	1	-	24935332	24938275	789624	4	486,139,117,124,	0,3039,4225,11462,
#Partially deleted in new
chr22	24935240	24939535	chr22:24935240-24939535	1	-	24935332	24939535	789624	3	355,139,201,	0,2908,4094,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr22	24952729	25194457	chr22:24952729-25194457	3	+	25027999	25190780	789624	14	43,137,152,1596,88,2766,135,119,250,175,125,143,83,2052,	0,61700,72903,75215,79879,86030,96500,218090,221510,224618,228969,232247,237972,239676,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	25009684	25015072	chr22:25009684-25015072	3	-	25009684	25009684	8553170	1	5388,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	25022593	25024652	chr22:25022593-25024652	3	-	25022593	25022593	8553170	1	2059,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr22	25027973	25197444	chr22:25027973-25197444	1	+	25027999	25190780	789624	11	1567,88,2766,135,119,250,175,125,143,83,5039,	0,4635,10786,21256,142846,146266,149374,153725,157003,162728,164432,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	25040580	25186451	chr22:25040580-25186451	0	+	25040580	25040580	8553170	6	945,135,119,3283,125,1475,	0,8649,130239,133659,141118,144396,
#Partially deleted in new
chr22	25041312	25049689	chr22:25041312-25049689	0	+	25041312	25041312	8553170	2	213,460,	0,7917,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	25048966	25051966	chr22:25048966-25051966	3	-	25048966	25048966	8553170	1	3000,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	25052121	25065241	chr22:25052121-25065241	3	-	25052121	25052121	8553170	1	13120,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	25069968	25197448	chr22:25069968-25197448	1	+	25070365	25190780	789624	8	448,119,250,175,125,143,83,5043,	0,100851,104271,107379,111730,115008,120733,122437,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	25102432	25112692	chr22:25102432-25112692	3	-	25102432	25102432	789624	5	486,118,40,237,76,	0,7568,8525,9754,10184,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	25111841	25197399	chr22:25111841-25197399	1	+	25112177	25190780	789624	8	621,119,250,175,125,143,83,4994,	0,58978,62398,65506,69857,73135,78860,80564,
#Deleted in new
chr22	25179308	25179554	chr22:25179308-25179554	7	-	25179308	25179308	16724991	1	246,	0,
#Partially deleted in new
chr22	25199849	25207363	chr22:25199849-25207363	3	+	25201396	25207212	0	6	60,95,119,133,143,317,	0,1527,2824,3913,5370,7197,
#Partially deleted in new
chr22	25199872	25207267	chr22:25199872-25207267	1	+	25201396	25207061	789624	5	37,91,119,133,221,	0,1508,2801,3890,7174,
#Deleted in new
chr22	25212741	25213685	chr22:25212741-25213685	3	+	25212741	25212741	8553170	2	99,383,	0,561,
#Partially deleted in new
chr22	25219521	25231869	chr22:25219521-25231869	3	+	25221429	25231772	0	6	145,80,119,133,143,266,	0,1882,5396,8331,9914,12082,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	25251522	25252602	chr22:25251522-25252602	3	-	25251522	25251522	8553170	1	1080,	0,
#Partially deleted in new
chr22	25279528	25282291	chr22:25279528-25282291	3	-	25279528	25279528	8553170	2	167,261,	0,2502,
#Deleted in new
chr22	25281285	25282674	chr22:25281285-25282674	1	-	25281285	25281285	8553170	3	100,261,65,	0,745,1324,
#Partially deleted in new
chr22	25282612	25320086	chr22:25282612-25320086	3	+	25282612	25282612	8553170	4	443,77,119,320,	0,18102,35644,37154,
#Partially deleted in new
chr22	25282942	25300791	chr22:25282942-25300791	7	+	25282942	25282942	16724991	2	113,77,	0,17772,
#Deleted in new
chr22	25318255	25320080	chr22:25318255-25320080	7	+	25318255	25318255	16724991	2	120,314,	0,1511,
#Partially deleted in new
chr22	25327251	25339975	chr22:25327251-25339975	7	+	25327251	25327251	16724991	4	487,68,22,86,	0,8881,10020,12638,
#Deleted in new
chr22	25349542	25350322	chr22:25349542-25350322	7	-	25349542	25349542	16724991	1	780,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	25351417	25362557	chr22:25351417-25362557	0	-	25351417	25351417	8553170	4	485,217,172,2731,	0,3178,5837,8409,
#Partially deleted in new
chr22	25351420	25381577	chr22:25351420-25381577	3	-	25351798	25360092	789624	6	482,217,172,397,196,197,	0,3175,5834,8406,24392,29960,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	25351420	25362557	chr22:25351420-25362557	1	-	25351798	25360092	789624	4	482,217,172,2731,	0,3175,5834,8406,
#Partially deleted in new
chr22	25351456	25405377	chr22:25351456-25405377	0	-	25351456	25351456	8553170	7	358,217,172,397,196,198,176,	0,3139,5798,8370,24356,29924,53745,
#Partially deleted in new
chr22	25351456	25405377	chr22:25351456-25405377	0	-	25351456	25351456	8553170	8	358,217,172,397,132,196,198,176,	0,3139,5798,8370,22711,24356,29924,53745,
#Partially deleted in new
chr22	25351461	25360189	chr22:25351461-25360189	0	-	25351461	25351461	8553170	4	441,217,172,363,	0,3134,5793,8365,
#Partially deleted in new
chr22	25351611	25381578	chr22:25351611-25381578	4	-	25351611	25351611	16724991	7	291,217,172,397,132,196,198,	0,2984,5643,8215,22556,24201,29769,
#Partially deleted in new
chr22	25351787	25360225	chr22:25351787-25360225	0	-	25351787	25351787	8553170	4	115,217,172,310,	0,2808,5467,8128,
#Partially deleted in new
chr22	25354756	25357806	chr22:25354756-25357806	0	-	25354756	25354756	8553170	2	56,552,	0,2498,
#Partially deleted in new
chr22	25360081	25381531	chr22:25360081-25381531	0	-	25360081	25360081	8553170	4	142,111,196,151,	0,1127,15731,21299,
#Deleted in new
chr22	25434323	25435070	chr22:25434323-25435070	3	-	25434323	25434323	8553170	1	747,	0,
#Deleted in new
chr22	25436311	25436915	chr22:25436311-25436915	3	+	25436311	25436311	8553170	1	604,	0,
#Deleted in new
chr22	25437305	25437823	chr22:25437305-25437823	7	-	25437305	25437305	16724991	2	351,46,	0,472,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	25448104	25461678	chr22:25448104-25461678	5	+	25448104	25448104	16724991	5	180,129,143,100,812,	0,7607,9154,11311,12762,
#Deleted in new
chr22	25455645	25455711	chr22:25455645-25455711	3	+	25455645	25455645	5263520	1	66,	0,
#Partially deleted in new
chr22	25455711	25459681	chr22:25455711-25459681	5	+	25455711	25455711	16724991	3	129,143,266,	0,1547,3704,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	25455717	25511628	chr22:25455717-25511628	4	+	25455717	25455717	16724991	6	123,143,100,160,34,1000,	0,1541,3698,53465,54319,54911,
#Partially deleted in new
chr22	25455795	25520854	chr22:25455795-25520854	7	+	25455795	25455795	16724991	5	45,143,100,240,173,	0,1463,3620,64127,64886,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	25459975	25461668	chr22:25459975-25461668	4	+	25459975	25459975	16724991	1	1693,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	25476217	25479971	chr22:25476217-25479971	3	+	25476217	25476217	8553170	1	3754,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	25518034	25520853	chr22:25518034-25520853	4	+	25518034	25518034	16724991	1	2819,	0,
#Partially deleted in new
chr22	25561116	25564462	chr22:25561116-25564462	3	-	25561116	25561116	8553170	2	382,106,	0,3240,
#Partially deleted in new
chr22	25561123	25564150	chr22:25561123-25564150	0	-	25561123	25561123	8553170	2	375,61,	0,2966,
#Deleted in new
chr22	25563100	25564259	chr22:25563100-25564259	1	-	25563100	25563100	8553170	3	102,179,170,	0,202,989,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr22	25564848	25729294	chr22:25564848-25729294	3	+	25565040	25722450	789624	21	305,77,74,102,75,62,52,92,100,79,131,95,108,67,101,67,96,163,137,114,7006,	0,39528,79743,96727,98781,102890,107447,109588,113967,120321,122688,125340,130258,138661,139260,145049,146219,149559,153396,156435,157440,
#Partially deleted in new
chr22	25564911	25723018	chr22:25564911-25723018	1	+	25565040	25702845	789624	23	67,134,77,74,102,75,62,52,92,100,79,131,95,108,150,67,101,67,96,163,137,114,730,	0,108,39465,79680,96664,98718,102827,107384,109525,113904,120258,122625,125277,130195,137930,138598,139197,144986,146156,149496,153333,156372,157377,
#Partially deleted in new
chr22	25565106	25684568	chr22:25565106-25684568	0	+	25565106	25661589	789624	9	47,77,102,75,62,52,92,100,50,	0,39270,96469,98523,102632,107189,109330,113709,119412,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	25580240	25581382	chr22:25580240-25581382	3	-	25580240	25580240	8553170	2	344,316,	0,826,
#Partially deleted in new
chr22	25647260	25649232	chr22:25647260-25649232	7	+	25647260	25647260	16724991	2	532,1096,	0,876,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	25715040	25715169	chr22:25715040-25715169	7	-	25715040	25715040	16724991	1	129,	0,
#Partially deleted in new
chr22	25742143	26027766	chr22:25742143-26027766	1	+	25761092	26027678	789624	43	150,148,159,1314,67,113,177,199,143,101,64,145,174,91,193,81,148,160,184,223,110,66,129,144,90,120,109,125,155,124,201,111,105,153,114,117,84,138,186,131,45,138,1322,	0,18840,21087,25971,27966,28728,30190,35439,37912,39590,43284,55809,81361,84265,86632,90773,93152,101591,103956,105286,109326,126176,132142,134045,135815,148612,149160,153012,156163,160469,161487,166178,168802,179113,203993,205568,208223,210142,213035,250219,261121,262574,284301,
#Partially deleted in new
chr22	25742152	26031041	chr22:25742152-26031041	3	+	25761092	26027678	789624	44	141,148,159,1314,67,113,177,199,143,101,64,145,174,91,193,81,148,160,184,223,110,66,129,144,90,120,109,125,155,124,201,111,105,153,114,117,84,138,186,131,45,138,1246,599,	0,18831,21078,25962,27957,28719,30181,35430,37903,39581,43275,55800,81352,84256,86623,90764,93143,101582,103947,105277,109317,126167,132133,134036,135806,148603,149151,153003,156154,160460,161478,166169,168793,179104,203984,205559,208214,210133,213026,250210,261112,262565,284292,288290,
#Partially deleted in new
chr22	25742233	26030644	chr22:25742233-26030644	1	+	25761092	26027678	789624	44	60,148,159,1314,67,113,177,199,143,101,64,145,174,91,193,81,151,160,184,223,110,66,129,144,90,120,109,125,155,124,201,111,105,153,114,117,84,138,186,131,45,138,1246,202,	0,18750,20997,25881,27876,28638,30100,35349,37822,39500,43194,55719,81271,84175,86542,90683,93059,101501,103866,105196,109236,126086,132052,133955,135725,148522,149070,152922,156073,160379,161397,166088,168712,179023,203903,205478,208133,210052,212945,250129,261031,262484,284211,288209,
#Deleted in new
chr22	25756317	25756669	chr22:25756317-25756669	3	-	25756317	25756317	8553170	1	352,	0,
#Partially deleted in new
chr22	25761033	26030586	chr22:25761033-26030586	0	+	25761092	25823525	789624	42	98,159,1314,67,113,177,199,143,101,64,174,91,193,81,148,160,184,223,110,66,129,144,90,120,109,125,155,124,201,111,105,153,114,117,84,138,186,131,45,138,1246,144,	0,2197,7081,9076,9838,11300,16549,19022,20700,24394,62471,65375,67742,71883,74262,82701,85066,86396,90436,107286,113252,115155,116925,129722,130270,134122,137273,141579,142597,147288,149912,160223,185103,186678,189333,191252,194145,231329,242231,243684,265411,269409,
#Partially deleted in new
chr22	25770026	26027766	chr22:25770026-26027766	0	+	25770026	25770026	8553170	39	150,113,177,199,143,101,64,145,174,91,193,81,148,160,184,223,110,66,129,144,90,120,109,125,155,124,201,111,105,153,114,117,84,138,186,131,45,138,1322,	0,845,2307,7556,10029,11707,15401,27926,53478,56382,58749,62890,65269,73708,76073,77403,81443,98293,104259,106162,107932,120729,121277,125129,128280,132586,133604,138295,140919,151230,176110,177685,180340,182259,185152,222336,233238,234691,256418,
#Partially deleted in new
chr22	25876853	25901042	chr22:25876853-25901042	0	-	25876853	25876853	8553170	6	448,168,414,158,169,218,	0,7862,15373,18257,22862,23971,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	25883395	25901050	chr22:25883395-25901050	1	-	25883395	25883395	8553170	5	305,168,414,169,226,	0,1320,8831,16320,17429,
#Partially deleted in new
chr22	25892225	25901033	chr22:25892225-25901033	1	-	25892225	25892225	8553170	4	415,58,169,209,	0,6158,7490,8599,
#Partially deleted in new
chr22	25892362	25898998	chr22:25892362-25898998	1	-	25892362	25892362	8553170	3	278,58,395,	0,6021,6241,
#Deleted in new
chr22	25892397	25895595	chr22:25892397-25895595	0	-	25892397	25892397	8553170	2	243,485,	0,2713,
#Partially deleted in new
chr22	25892397	25900622	chr22:25892397-25900622	0	-	25892397	25892397	8553170	3	243,158,353,	0,2713,7872,
#Partially deleted in new
chr22	25892397	25901010	chr22:25892397-25901010	1	-	25892397	25892397	8553170	5	243,158,58,169,186,	0,2713,5986,7318,8427,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	25892399	25896847	chr22:25892399-25896847	1	-	25892399	25892399	8553170	2	241,575,	0,3873,
#Partially deleted in new
chr22	25892399	25901067	chr22:25892399-25901067	0	-	25892399	25892399	8553170	4	241,169,60,243,	0,7316,7870,8425,
#Partially deleted in new
chr22	25892404	25900630	chr22:25892404-25900630	1	-	25892404	25892404	8553170	3	236,169,361,	0,7311,7865,
#Deleted in new
chr22	25892413	25895643	chr22:25892413-25895643	1	-	25892413	25892413	8553170	2	227,546,	0,2684,
#Partially deleted in new
chr22	25892436	25901016	chr22:25892436-25901016	0	-	25892436	25892436	8553170	4	204,58,169,338,	0,5947,7279,8242,
#Partially deleted in new
chr22	25892436	25903247	chr22:25892436-25903247	0	-	25892436	25892436	8553170	3	204,169,262,	0,7279,10549,
#Partially deleted in new
chr22	25892436	25898994	chr22:25892436-25898994	0	-	25892436	25892436	8553170	4	204,158,58,391,	0,2674,5947,6167,
#Deleted in new
chr22	25892436	25896756	chr22:25892436-25896756	1	-	25892436	25892436	8553170	3	204,171,481,	0,2661,3839,
#Partially deleted in new
chr22	25892436	25901067	chr22:25892436-25901067	1	-	25892436	25892436	8553170	6	204,260,58,169,60,243,	0,2674,5947,7279,7833,8388,
#Partially deleted in new
chr22	25892436	25901036	chr22:25892436-25901036	0	-	25892436	25892436	8553170	3	204,260,212,	0,2674,8388,
#Deleted in new
chr22	25892436	25896744	chr22:25892436-25896744	1	-	25892436	25892436	8553170	3	204,161,472,	0,2901,3836,
#Partially deleted in new
chr22	25892436	25903246	chr22:25892436-25903246	0	-	25892436	25892436	8553170	4	204,58,169,261,	0,5947,7279,10549,
#Partially deleted in new
chr22	25892437	25897596	chr22:25892437-25897596	1	-	25892437	25892437	8553170	2	203,601,	0,4558,
#Partially deleted in new
chr22	25892443	25900473	chr22:25892443-25900473	0	-	25892443	25892443	8553170	3	197,169,109,	0,7272,7921,
#Partially deleted in new
chr22	25892444	25900537	chr22:25892444-25900537	0	-	25892444	25892444	8553170	2	196,173,	0,7920,
#Partially deleted in new
chr22	25892464	25898916	chr22:25892464-25898916	0	-	25892464	25892464	8553170	2	176,533,	0,5919,
#Partially deleted in new
chr22	25894693	25899820	chr22:25894693-25899820	0	-	25894693	25894693	8553170	2	575,105,	0,5022,
#Partially deleted in new
chr22	25894849	25899827	chr22:25894849-25899827	0	-	25894849	25894849	8553170	2	521,112,	0,4866,
#Partially deleted in new
chr22	25895141	25898752	chr22:25895141-25898752	0	-	25895141	25895141	8553170	2	357,369,	0,3242,
#Partially deleted in new
chr22	25897463	25898633	chr22:25897463-25898633	2	-	25897463	25897463	8553170	3	581,58,30,	0,920,1140,
#Deleted in new
chr22	25898932	25899827	chr22:25898932-25899827	1	-	25898932	25898932	8553170	2	686,112,	0,783,
#Partially deleted in new
chr22	25901177	25903764	chr22:25901177-25903764	0	+	25901177	25901177	8553170	3	349,124,134,	0,1435,2453,
#Partially deleted in new
chr22	25901177	25903797	chr22:25901177-25903797	0	+	25901177	25901177	8553170	3	324,124,167,	0,1435,2453,
#Partially deleted in new
chr22	25953534	25965071	chr22:25953534-25965071	0	+	25953534	25953534	8553170	3	86,186,280,	0,1644,11257,
#Partially deleted in new
chr22	25955314	26030645	chr22:25955314-26030645	0	+	25955314	26027678	789624	5	50,131,138,1246,203,	0,37048,49403,71130,75128,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	25959073	25983526	chr22:25959073-25983526	3	-	25959073	25959073	8553170	2	250,222,	0,24231,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	25963982	25964273	chr22:25963982-25964273	3	-	25963982	25963982	8553170	1	291,	0,
#Deleted in new
chr22	26006388	26006532	chr22:26006388-26006532	7	-	26006388	26006388	16724991	1	144,	0,
#Partially deleted in new
chr22	26027048	26030644	chr22:26027048-26030644	0	+	26027048	26027678	789624	3	642,255,202,	0,1292,3394,
#Deleted in new
chr22	26161833	26164303	chr22:26161833-26164303	3	+	26161833	26161833	8553170	2	46,142,	0,2328,
#Deleted in new
chr22	26161909	26163214	chr22:26161909-26163214	3	-	26161909	26161909	8553170	3	233,54,70,	0,319,1235,
#Partially deleted in new
chr22	26169473	26380471	chr22:26169473-26380471	1	+	26169669	26380295	0	17	290,741,134,193,186,166,167,195,139,197,195,192,195,33,112,103,206,	0,122932,124818,127414,129510,136505,141196,142294,144290,170962,178245,181578,195898,203977,206104,208199,210792,
#Partially deleted in new
chr22	26169473	26383597	chr22:26169473-26383597	1	+	26169669	26380295	789624	16	290,741,134,193,186,166,167,195,139,197,195,192,195,109,103,3332,	0,122932,124818,127414,129510,136505,141196,142294,144290,170962,178245,181578,195898,206107,208199,210792,
#Partially deleted in new
chr22	26169513	26383596	chr22:26169513-26383596	1	+	26169669	26380295	0	15	250,741,134,193,186,166,167,195,139,197,195,195,115,103,3331,	0,122892,124778,127374,129470,136465,141156,142254,144250,170922,178205,195858,206061,208159,210752,
#Partially deleted in new
chr22	26169574	26380373	chr22:26169574-26380373	3	+	26169669	26380295	0	17	189,741,134,193,186,166,167,195,139,197,195,192,195,33,115,103,108,	0,122831,124717,127313,129409,136404,141095,142193,144189,170861,178144,181477,195797,203876,206000,208098,210691,
#Partially deleted in new
chr22	26169574	26380373	chr22:26169574-26380373	1	+	26169669	26380295	0	16	189,741,134,193,186,166,167,195,139,197,195,192,195,115,103,108,	0,122831,124717,127313,129409,136404,141095,142193,144189,170861,178144,181477,195797,206000,208098,210691,
#Partially deleted in new
chr22	26169657	26380334	chr22:26169657-26380334	1	+	26169669	26380295	0	15	106,741,134,193,186,166,167,195,139,197,195,192,115,103,69,	0,122748,124634,127230,129326,136321,141012,142110,144106,170778,178061,181394,205917,208015,210608,
#Partially deleted in new
chr22	26241330	26254092	chr22:26241330-26254092	3	-	26241330	26241330	8553170	5	81,104,159,72,119,	0,1421,3006,3287,12643,
#Partially deleted in new
chr22	26292250	26380468	chr22:26292250-26380468	1	+	26292992	26380295	789624	16	896,134,193,186,166,167,195,139,197,195,192,195,33,112,103,203,	0,2041,4637,6733,13728,18419,19517,21513,48185,55468,58801,73121,81200,83327,85422,88015,
#Partially deleted in new
chr22	26292250	26380468	chr22:26292250-26380468	1	+	26292992	26380295	789624	14	896,134,193,186,166,167,195,139,197,195,192,112,103,203,	0,2041,4637,6733,13728,18419,19517,21513,48185,55468,58801,83327,85422,88015,
#Partially deleted in new
chr22	26347788	26351456	chr22:26347788-26351456	0	+	26347788	26347788	8553170	2	125,405,	0,3263,
#Partially deleted in new
chr22	26364748	26377720	chr22:26364748-26377720	0	+	26364748	26364748	8553170	4	208,195,112,48,	0,623,10829,12924,
#Deleted in new
chr22	26390666	26390776	chr22:26390666-26390776	7	-	26390666	26390666	16724991	1	110,	0,
#Partially deleted in new
chr22	26422070	26423193	chr22:26422070-26423193	7	-	26422070	26422070	16724991	2	159,648,	0,475,
#Partially deleted in new
chr22	26429272	26445015	chr22:26429272-26445015	3	+	26433615	26443206	789624	4	214,1110,114,1919,	0,4119,13186,13824,
#Partially deleted in new
chr22	26443422	26464015	chr22:26443422-26464015	0	-	26443422	26443422	8553170	4	130,109,133,99,	0,14436,15022,20494,
#Partially deleted in new
chr22	26444226	26464192	chr22:26444226-26464192	0	-	26444226	26444226	8553170	4	468,109,133,276,	0,13632,14218,19690,
#Partially deleted in new
chr22	26451479	26483812	chr22:26451479-26483812	3	-	26453232	26481762	789624	14	1925,109,133,910,97,37,73,95,117,108,144,91,519,139,	0,6379,6965,12437,13975,14746,17071,19239,20822,21352,25513,27785,30242,32194,
#Deleted in new
chr22	26451479	26452892	chr22:26451479-26452892	0	-	26451479	26451479	8553170	2	342,144,	0,1269,
#Partially deleted in new
chr22	26452082	26483795	chr22:26452082-26483795	1	-	26453232	26481762	789624	14	1322,109,133,910,97,37,73,95,117,108,144,91,519,31,	0,5776,6362,11834,13372,14143,16468,18636,20219,20749,24910,27182,29639,31682,
#Partially deleted in new
chr22	26452082	26479681	chr22:26452082-26479681	1	-	26453232	26479381	789624	12	1322,109,133,910,97,37,73,95,117,108,144,417,	0,5776,6362,11834,13372,14143,16468,18636,20219,20749,24910,27182,
#Partially deleted in new
chr22	26452082	26479448	chr22:26452082-26479448	0	-	26470832	26479381	789624	13	1322,109,133,910,97,54,37,73,204,117,108,144,184,	0,5776,6362,11834,13372,13968,14143,16468,18636,20219,20749,24910,27182,
#Partially deleted in new
chr22	26452082	26483836	chr22:26452082-26483836	0	-	26470832	26481762	789624	14	1322,109,133,910,97,37,73,204,117,108,144,91,519,72,	0,5776,6362,11834,13372,14143,16468,18636,20219,20749,24910,27182,29639,31682,
#Partially deleted in new
chr22	26452082	26479546	chr22:26452082-26479546	0	-	26471370	26479381	789624	12	1322,109,133,910,808,73,95,176,117,108,144,282,	0,5776,6362,11834,13372,16468,18636,19130,20219,20749,24910,27182,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	26452082	26483837	chr22:26452082-26483837	0	-	26452082	26452082	8553170	13	1322,109,133,910,97,2398,95,117,108,144,91,519,93,	0,5776,6362,11834,13372,14143,18636,20219,20749,24910,27182,29639,31662,
#Partially deleted in new
chr22	26453111	26479488	chr22:26453111-26479488	0	-	26453111	26453111	8553170	9	293,910,808,73,95,117,108,144,224,	0,10805,12343,15439,17607,19190,19720,23881,26153,
#Partially deleted in new
chr22	26453645	26472950	chr22:26453645-26472950	0	-	26453645	26453645	8553170	7	327,109,133,73,95,117,119,	0,4213,4799,14905,17073,18656,19186,
#Partially deleted in new
chr22	26464238	26483783	chr22:26464238-26483783	0	-	26464238	26481762	789624	12	588,97,54,37,73,95,117,108,144,91,519,19,	0,1216,1812,1987,4312,6480,8063,8593,12754,15026,17483,19526,
#Partially deleted in new
chr22	26465520	26477011	chr22:26465520-26477011	0	-	26465520	26465520	8553170	8	31,37,73,95,76,117,108,19,	0,705,3030,5198,5692,6781,7311,11472,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	26475369	26479411	chr22:26475369-26479411	0	-	26475369	26475369	8553170	2	1767,147,	0,3895,
#Partially deleted in new
chr22	26476990	26483836	chr22:26476990-26483836	0	-	26476990	26476990	8553170	3	146,519,72,	0,4731,6774,
#Deleted in new
chr22	26481834	26483836	chr22:26481834-26483836	0	-	26481834	26481834	8553170	3	406,128,163,	0,911,1839,
#Deleted in new
chr22	26481857	26483828	chr22:26481857-26483828	0	-	26481857	26481857	8553170	3	383,128,64,	0,888,1907,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	26483876	26494658	chr22:26483876-26494658	3	+	26483890	26491672	789624	7	223,41,260,99,155,46,3196,	0,2146,4152,4513,6167,7148,7586,
#Partially deleted in new
chr22	26487981	26491070	chr22:26487981-26491070	0	+	26487981	26487981	8553170	4	307,99,155,46,	0,408,2062,3043,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	26490772	26491832	chr22:26490772-26491832	0	+	26490772	26490772	8553170	2	298,370,	0,690,
#Partially deleted in new
chr22	26491224	26512505	chr22:26491224-26512505	3	-	26492012	26510272	789624	15	1144,166,143,244,169,107,528,153,128,157,154,218,86,77,112,	0,2914,3572,4848,5496,7644,7879,10675,12441,15078,15550,18839,19392,20874,21169,
#Partially deleted in new
chr22	26491224	26510707	chr22:26491224-26510707	1	-	26492012	26510272	789624	13	1144,166,143,244,169,107,528,153,128,157,154,218,91,	0,2914,3572,4848,5496,7644,7879,10675,12441,15078,15550,18839,19392,
#Partially deleted in new
chr22	26491926	26512496	chr22:26491926-26512496	1	-	26492012	26510272	789624	14	442,166,143,244,169,107,528,153,128,157,154,218,77,103,	0,2212,2870,4146,4794,6942,7177,9973,11739,14376,14848,18137,20172,20467,
#Partially deleted in new
chr22	26491926	26512377	chr22:26491926-26512377	1	-	26492012	26510272	789624	14	442,166,143,244,169,107,528,153,128,157,154,218,86,279,	0,2212,2870,4146,4794,6942,7177,9973,11739,14376,14848,18137,18690,20172,
#Partially deleted in new
chr22	26491926	26494619	chr22:26491926-26494619	0	-	26491926	26491926	8553170	2	442,481,	0,2212,
#Deleted in new
chr22	26498702	26499391	chr22:26498702-26499391	0	-	26498702	26498702	8553170	2	273,288,	0,401,
#Partially deleted in new
chr22	26499413	26506332	chr22:26499413-26506332	0	-	26499413	26506332	789624	4	218,195,128,30,	0,2486,4252,6889,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	26499536	26506105	chr22:26499536-26506105	0	-	26499536	26499536	8553170	4	95,153,128,196,	0,2363,4129,6373,
#Partially deleted in new
chr22	26502035	26506712	chr22:26502035-26506712	0	-	26502035	26502035	8553170	3	17,128,410,	0,1630,4267,
#Partially deleted in new
chr22	26506672	26512505	chr22:26506672-26512505	0	-	26506672	26506672	8553170	5	256,218,86,77,112,	0,3391,3944,5426,5721,
#Partially deleted in new
chr22	26506737	26512478	chr22:26506737-26512478	0	-	26506737	26506737	8553170	4	191,218,77,85,	0,3326,5361,5656,
#Partially deleted in new
chr22	26506877	26512496	chr22:26506877-26512496	0	-	26506877	26510272	789624	5	51,218,76,77,103,	0,3186,3739,5221,5516,
#Deleted in new
chr22	26511688	26512495	chr22:26511688-26512495	0	-	26511688	26511688	8553170	2	487,102,	0,705,
#Deleted in new
chr22	26512536	26514568	chr22:26512536-26514568	3	+	26512536	26512536	8553170	1	2032,	0,
#Deleted in new
chr22	26512554	26513912	chr22:26512554-26513912	1	+	26512554	26512554	8553170	2	480,501,	0,857,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	26521982	26590163	chr22:26521982-26590163	1	-	26528220	26541630	0	7	4285,49,51,199,930,72,111,	0,6231,10712,14305,18806,22621,68070,
#Partially deleted in new
chr22	26525745	26565368	chr22:26525745-26565368	1	-	26528220	26541630	0	7	522,49,51,199,930,72,145,	0,2468,6949,10542,15043,18858,39478,
#Partially deleted in new
chr22	26525745	26596717	chr22:26525745-26596717	3	-	26528220	26541630	0	8	522,49,51,199,930,170,72,91,	0,2468,6949,10542,15043,17362,18858,70881,
#Partially deleted in new
chr22	26535894	26540871	chr22:26535894-26540871	0	-	26536062	26540871	789624	2	592,83,	0,4894,
#Partially deleted in new
chr22	26541205	26590125	chr22:26541205-26590125	0	-	26541205	26541630	789624	2	513,73,	0,48847,
#Partially deleted in new
chr22	26541270	26550653	chr22:26541270-26550653	0	-	26541270	26541630	789624	3	448,72,62,	0,3333,9321,
#Partially deleted in new
chr22	26541438	26590125	chr22:26541438-26590125	0	-	26541438	26541630	789624	4	280,72,119,73,	0,3165,6061,48614,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	26541484	26565726	chr22:26541484-26565726	0	-	26541484	26541630	789624	2	234,280,	0,23962,
#Partially deleted in new
chr22	26541489	26590125	chr22:26541489-26590125	0	-	26541489	26541630	789624	4	229,170,72,73,	0,1618,3114,48563,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	26555211	26555323	chr22:26555211-26555323	3	-	26555211	26555211	5263520	1	112,	0,
#Deleted in new
chr22	26560525	26561088	chr22:26560525-26561088	7	+	26560525	26560525	16724991	1	563,	0,
#Partially deleted in new
chr22	26599277	26618088	chr22:26599277-26618088	3	-	26599489	26616319	0	6	396,143,133,119,199,112,	0,2601,8611,12794,16862,18699,
#Partially deleted in new
chr22	26599277	26618027	chr22:26599277-26618027	1	-	26599489	26616319	789624	6	396,143,133,119,199,51,	0,2601,8611,12794,16862,18699,
#Partially deleted in new
chr22	26601948	26608329	chr22:26601948-26608329	0	-	26601948	26601948	8553170	3	73,133,111,	0,5940,6270,
#Partially deleted in new
chr22	26621963	26630672	chr22:26621963-26630672	3	+	26622596	26630487	0	6	23,51,119,142,143,333,	0,621,1270,3517,6324,8376,
#Partially deleted in new
chr22	26621982	26630641	chr22:26621982-26630641	0	+	26621982	26621982	8553170	5	4,51,142,143,302,	0,602,3498,6305,8357,
#Partially deleted in new
chr22	26644888	26645336	chr22:26644888-26645336	7	-	26644888	26644888	16724991	1	448,	0,
#Partially deleted in new
chr22	26646427	26665877	chr22:26646427-26665877	0	+	26646427	26646427	8553170	3	532,83,347,	0,16888,19103,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	26646451	26669655	chr22:26646451-26669655	1	+	26646451	26646451	8553170	6	508,138,83,1407,126,1498,	0,722,16864,19079,20733,21706,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	26646473	26650519	chr22:26646473-26650519	0	+	26646473	26646473	8553170	3	486,138,287,	0,700,3759,
#Partially deleted in new
chr22	26646639	26665639	chr22:26646639-26665639	0	+	26646639	26646639	8553170	3	320,83,183,	0,16676,18817,
#Partially deleted in new
chr22	26647223	26665909	chr22:26647223-26665909	0	+	26647223	26647223	8553170	3	117,83,379,	0,16092,18307,
#Partially deleted in new
chr22	26647227	26665809	chr22:26647227-26665809	0	+	26647227	26647227	8553170	4	113,118,83,279,	0,13471,16088,18303,
#Partially deleted in new
chr22	26657225	26665872	chr22:26657225-26665872	0	+	26657225	26657225	8553170	3	129,83,416,	0,6090,8231,
#Partially deleted in new
chr22	26657255	26665769	chr22:26657255-26665769	0	+	26657255	26657255	8553170	4	99,173,83,239,	0,226,6060,8275,
#Partially deleted in new
chr22	26657255	26666195	chr22:26657255-26666195	0	+	26657255	26657255	8553170	3	99,83,665,	0,6060,8275,
#Partially deleted in new
chr22	26657266	26665815	chr22:26657266-26665815	0	+	26657266	26657266	8553170	3	88,194,285,	0,6049,8264,
#Partially deleted in new
chr22	26657279	26665949	chr22:26657279-26665949	0	+	26657279	26657279	8553170	2	75,493,	0,8177,
#Partially deleted in new
chr22	26657279	26665918	chr22:26657279-26665918	0	+	26657279	26657279	8553170	3	75,83,454,	0,6036,8185,
#Partially deleted in new
chr22	26657283	26666023	chr22:26657283-26666023	0	+	26657283	26657283	8553170	4	71,173,83,567,	0,198,6032,8173,
#Partially deleted in new
chr22	26657457	26666180	chr22:26657457-26666180	0	+	26657457	26657457	8553170	3	197,194,650,	0,5858,8073,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	26657467	26676475	chr22:26657467-26676475	0	+	26657467	26657467	789624	4	187,83,1481,8318,	0,5848,7989,10690,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	26657519	26676475	chr22:26657519-26676475	1	+	26657519	26657519	789624	5	135,83,1481,126,8318,	0,5796,7937,9665,10638,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	26657519	26676475	chr22:26657519-26676475	2	+	26657519	26657519	8553170	4	135,83,1407,8318,	0,5796,8011,10638,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	26657519	26676475	chr22:26657519-26676475	0	+	26657519	26657519	789624	5	135,83,1407,126,8318,	0,5796,8011,9665,10638,
#Deleted in new
chr22	26657520	26657655	chr22:26657520-26657655	3	+	26657520	26657520	8553170	1	135,	0,
#Partially deleted in new
chr22	26657587	26665852	chr22:26657587-26665852	0	+	26657587	26657587	8553170	4	67,118,83,322,	0,3111,5728,7943,
#Partially deleted in new
chr22	26657588	26666038	chr22:26657588-26666038	0	+	26657588	26657588	8553170	2	66,508,	0,7942,
#Partially deleted in new
chr22	26657610	26665679	chr22:26657610-26665679	0	+	26657610	26657610	8553170	4	44,157,83,223,	0,572,5705,7846,
#Partially deleted in new
chr22	26657613	26665793	chr22:26657613-26665793	0	+	26657613	26657613	8553170	3	41,194,337,	0,5702,7843,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	26667692	26672654	chr22:26667692-26672654	3	-	26667692	26667692	8553170	3	1197,439,977,	0,1307,3985,
#Deleted in new
chr22	26671401	26671550	chr22:26671401-26671550	3	+	26671401	26671401	8553170	1	149,	0,
#Deleted in new
chr22	26672163	26672248	chr22:26672163-26672248	3	+	26672163	26672163	8553170	1	85,	0,
#Partially deleted in new
chr22	26672766	26734455	chr22:26672766-26734455	1	+	26672766	26672766	8553170	5	221,156,207,151,183,	0,20914,44486,53877,61506,
#Partially deleted in new
chr22	26672776	26776848	chr22:26672776-26776848	0	+	26672776	26672776	8553170	5	211,156,207,62,22,	0,20904,44476,101379,104050,
#Partially deleted in new
chr22	26672790	26717459	chr22:26672790-26717459	0	+	26672790	26672790	8553170	3	197,179,207,	0,39039,44462,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	26672804	26778635	chr22:26672804-26778635	0	+	26672804	26672804	789624	5	183,207,62,128,180,	0,44448,101351,104022,105651,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	26672804	26780207	chr22:26672804-26780207	3	+	26672804	26672804	8553170	6	183,179,62,128,130,324,	0,65257,101351,104022,105651,107079,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	26672813	26776882	chr22:26672813-26776882	0	+	26672813	26672813	8553170	5	174,207,92,62,56,	0,44439,45326,101342,104013,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	26672855	26718392	chr22:26672855-26718392	0	+	26672855	26672855	8553170	3	132,207,253,	0,44397,45284,
#Deleted in new
chr22	26673253	26673630	chr22:26673253-26673630	3	+	26673253	26673253	8553170	1	377,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	26717368	26722172	chr22:26717368-26722172	1	+	26717368	26717368	8553170	3	91,92,523,	0,771,4281,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	26858633	26865786	chr22:26858633-26865786	3	+	26858633	26858633	8553170	3	2389,124,3530,	0,3348,3623,
#Deleted in new
chr22	26886908	26887548	chr22:26886908-26887548	7	-	26886908	26886908	16724991	2	408,170,	0,470,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	26903291	26908113	chr22:26903291-26908113	1	+	26903291	26903291	8553170	3	140,190,179,	0,3286,4643,
#Partially deleted in new
chr22	26903339	26920611	chr22:26903339-26920611	3	+	26903339	26903339	789624	3	92,190,235,	0,3238,17037,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	27019368	27024550	chr22:27019368-27024550	3	+	27019368	27019368	8553170	1	5182,	0,
#Partially deleted in new
chr22	27035886	27035991	chr22:27035886-27035991	3	+	27035886	27035886	8553170	1	105,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	27040196	27041494	chr22:27040196-27041494	3	+	27040196	27040196	8553170	1	1298,	0,
#Deleted in new
chr22	27044000	27045315	chr22:27044000-27045315	3	+	27044000	27044000	8553170	1	1315,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	27048143	27060518	chr22:27048143-27060518	3	-	27048143	27048143	8553170	2	1973,410,	0,11965,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	27102765	27107019	chr22:27102765-27107019	3	+	27102765	27102765	8553170	1	4254,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	27143477	27159878	chr22:27143477-27159878	3	+	27143477	27143477	8553170	2	52,421,	0,15980,
#Deleted in new
chr22	27204210	27205126	chr22:27204210-27205126	3	+	27204210	27204210	8553170	2	150,158,	0,758,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	27221348	27224727	chr22:27221348-27224727	3	-	27221348	27221348	8553170	3	353,79,205,	0,2881,3174,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	27223296	27224657	chr22:27223296-27224657	1	-	27223296	27223296	8553170	3	338,79,135,	0,933,1226,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	27276239	27286349	chr22:27276239-27286349	3	+	27276239	27276239	8553170	3	105,114,55,	0,6214,10055,
#Partially deleted in new
chr22	27307482	27318538	chr22:27307482-27318538	3	-	27307482	27307482	8553170	3	83,109,386,	0,10036,10670,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	27310650	27317456	chr22:27310650-27317456	3	+	27310650	27310650	789624	2	4399,653,	0,6153,
#Partially deleted in new
chr22	27331786	27379265	chr22:27331786-27379265	3	+	27331786	27331786	8553170	4	152,173,166,80,	0,3371,4310,47399,
#Deleted in new
chr22	27414461	27415205	chr22:27414461-27415205	1	-	27414461	27414461	8553170	1	744,	0,
#Partially deleted in new
chr22	27414492	27419713	chr22:27414492-27419713	3	-	27414492	27414492	8553170	2	155,300,	0,4921,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	27457246	27460060	chr22:27457246-27460060	3	-	27457246	27457246	8553170	2	484,286,	0,2528,
#Partially deleted in new
chr22	27563838	27573573	chr22:27563838-27573573	3	-	27563838	27563838	8553170	3	84,427,66,	0,168,9669,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	27676558	27714970	chr22:27676558-27714970	3	-	27676558	27676558	8553170	5	329,166,111,123,90,	0,13161,21032,30135,38322,
#Partially deleted in new
chr22	27707579	27709931	chr22:27707579-27709931	3	+	27707579	27707579	8553170	2	74,41,	0,2311,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	27716479	27721677	chr22:27716479-27721677	3	+	27716479	27716479	8553170	2	84,367,	0,4831,
#Partially deleted in new
chr22	27748276	27801498	chr22:27748276-27801498	3	-	27750914	27800543	789624	2	2820,4736,	0,48486,
#Partially deleted in new
chr22	27750063	27796896	chr22:27750063-27796896	0	-	27750914	27796896	789624	3	165,321,134,	0,712,46699,
#Partially deleted in new
chr22	27750677	27791883	chr22:27750677-27791883	0	-	27750677	27750677	8553170	2	419,137,	0,41069,
#Partially deleted in new
chr22	27851668	27919268	chr22:27851668-27919268	3	-	27854891	27919191	789624	12	1995,86,123,111,78,84,75,8,92,146,31,97,	0,3185,6718,8462,22069,42886,44883,45461,46132,59295,62648,67503,
#Partially deleted in new
chr22	27851669	27919255	chr22:27851669-27919255	1	-	27853612	27919191	789624	11	1994,123,111,78,84,75,8,92,146,31,84,	0,6717,8461,22068,42885,44882,45460,46131,59294,62647,67502,
#Partially deleted in new
chr22	27851669	27919306	chr22:27851669-27919306	1	-	27854891	27919191	789624	11	1994,86,123,111,78,84,83,92,146,31,135,	0,3184,6717,8461,22068,42885,44882,46131,59294,62647,67502,
#Partially deleted in new
chr22	27853578	27919199	chr22:27853578-27919199	1	-	27854891	27919127	789624	12	85,86,123,111,78,84,75,8,92,146,31,98,	0,1275,4808,6552,20159,40976,42973,43551,44222,57385,60738,65523,
#Partially deleted in new
chr22	27854905	27898073	chr22:27854905-27898073	0	-	27854905	27854905	8553170	8	34,123,111,78,84,75,8,273,	0,3481,5225,18832,39649,41646,42224,42895,
#Deleted in new
chr22	27858430	27860615	chr22:27858430-27860615	0	-	27858430	27858430	8553170	2	79,485,	0,1700,
#Partially deleted in new
chr22	27860195	27920134	chr22:27860195-27920134	0	-	27860195	27897870	789624	9	46,78,84,75,8,92,146,31,324,	0,13542,34359,36356,36934,37605,50768,54121,59615,
#Partially deleted in new
chr22	27873774	27919214	chr22:27873774-27919214	0	-	27873774	27919127	789624	8	41,84,75,8,92,146,31,113,	0,20780,22777,23355,24026,37189,40542,45327,
#Partially deleted in new
chr22	27894160	27896702	chr22:27894160-27896702	0	-	27894160	27894160	8553170	2	478,151,	0,2391,
#Partially deleted in new
chr22	27896899	27919256	chr22:27896899-27919256	0	-	27896899	27896899	8553170	5	238,92,146,31,85,	0,901,14064,17417,22272,
#Partially deleted in new
chr22	27910447	27919244	chr22:27910447-27919244	0	-	27910447	27910447	8553170	3	662,31,73,	0,3869,8724,
#Partially deleted in new
chr22	27919375	27993292	chr22:27919375-27993292	0	+	27919375	27919375	8553170	4	170,80,145,169,	0,15775,70506,73748,
#Deleted in new
chr22	27919383	27919545	chr22:27919383-27919545	3	+	27919383	27919383	8553170	1	162,	0,
#Partially deleted in new
chr22	27919391	27997631	chr22:27919391-27997631	0	+	27919391	27919391	8553170	3	154,181,221,	0,75081,78019,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	27919400	27986392	chr22:27919400-27986392	0	+	27919400	27919400	8553170	2	145,701,	0,66291,
#Partially deleted in new
chr22	27919420	28002679	chr22:27919420-28002679	3	+	27919420	27919420	789624	5	125,80,181,1428,3250,	0,15730,75052,77990,80009,
#Partially deleted in new
chr22	27919428	27997775	chr22:27919428-27997775	0	+	27919428	27919428	8553170	3	117,80,365,	0,15722,77982,
#Partially deleted in new
chr22	27919436	27922570	chr22:27919436-27922570	0	+	27919436	27919436	8553170	2	109,553,	0,2581,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	27919439	27986342	chr22:27919439-27986342	0	+	27919439	27919439	8553170	3	106,80,651,	0,15711,66252,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	27919456	27924963	chr22:27919456-27924963	0	+	27919456	27919456	8553170	2	89,617,	0,4890,
#Partially deleted in new
chr22	27919456	27997700	chr22:27919456-27997700	1	+	27919456	27919456	8553170	4	89,412,181,290,	0,73667,75016,77954,
#Partially deleted in new
chr22	27919456	27997667	chr22:27919456-27997667	0	+	27919456	27919456	8553170	4	89,80,152,257,	0,15694,20563,77954,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	27919469	27924963	chr22:27919469-27924963	1	+	27919469	27919469	789624	3	76,161,617,	0,2548,4877,
#Partially deleted in new
chr22	27919471	27922087	chr22:27919471-27922087	0	+	27919471	27919471	8553170	2	495,70,	0,2546,
#Partially deleted in new
chr22	27919483	27922263	chr22:27919483-27922263	0	+	27919483	27919483	8553170	3	62,244,246,	0,239,2534,
#Partially deleted in new
chr22	27919483	27993505	chr22:27919483-27993505	0	+	27919483	27919483	8553170	3	62,80,382,	0,15667,73640,
#Partially deleted in new
chr22	27919490	27999476	chr22:27919490-27999476	0	+	27919490	27919490	8553170	5	55,80,329,235,47,	0,15660,77920,79113,79939,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	27919517	27986229	chr22:27919517-27986229	0	+	27919517	27919517	8553170	4	28,161,80,538,	0,2500,15633,66174,
#Deleted in new
chr22	27920524	27920612	chr22:27920524-27920612	3	-	27920524	27920524	5263520	1	88,	0,
#Deleted in new
chr22	27920525	27920611	chr22:27920525-27920611	3	+	27920525	27920525	5263520	1	86,	0,
#Deleted in new
chr22	27922021	27922178	chr22:27922021-27922178	3	+	27922021	27922021	8553170	1	157,	0,
#Partially deleted in new
chr22	27935160	27999657	chr22:27935160-27999657	0	+	27935160	27935160	8553170	3	70,329,228,	0,62250,64269,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr22	27978013	28679865	chr22:27978013-28679865	3	-	27982220	28679723	789624	23	5838,108,130,24,77,232,125,721,180,145,141,166,219,130,110,524,1342,508,131,273,148,279,244,	0,7235,11864,12775,14573,15273,18121,20526,23360,36234,52212,116066,118176,120901,123157,127265,129048,185078,318184,319566,328482,651538,701608,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr22	27978013	28306645	chr22:27978013-28306645	1	-	27982220	28306643	789624	21	5838,108,130,24,77,232,125,721,180,145,141,166,219,130,110,524,1342,508,131,273,150,	0,7235,11864,12775,14573,15273,18121,20526,23360,36234,52212,116066,118176,120901,123157,127265,129048,185078,318184,319566,328482,
#Partially deleted in new
chr22	27983598	27996239	chr22:27983598-27996239	0	-	27983598	27996239	789624	6	253,108,130,77,232,105,	0,1650,6279,8988,9688,12536,
#Partially deleted in new
chr22	27983751	27990076	chr22:27983751-27990076	0	-	27983751	27983751	8553170	3	100,108,199,	0,1497,6126,
#Partially deleted in new
chr22	27992468	28008581	chr22:27992468-28008581	1	+	27992468	27992468	8553170	5	1067,181,329,2229,2053,	0,2004,4942,6961,14060,
#Partially deleted in new
chr22	27992611	27996424	chr22:27992611-27996424	0	-	27992611	27992611	8553170	3	52,232,290,	0,675,3523,
#Partially deleted in new
chr22	27992927	27997423	chr22:27992927-27997423	0	+	27992927	27992927	8553170	3	608,181,13,	0,1545,4483,
#Partially deleted in new
chr22	27993112	28000723	chr22:27993112-28000723	1	+	27993112	27993112	8553170	5	423,181,329,853,1294,	0,1360,4298,4873,6317,
#Deleted in new
chr22	27994473	27994654	chr22:27994473-27994654	3	+	27994473	27994473	8553170	1	181,	0,
#Deleted in new
chr22	27997576	27998782	chr22:27997576-27998782	0	+	27997576	27997576	8553170	3	163,167,179,	0,409,1027,
#Deleted in new
chr22	28002483	28002595	chr22:28002483-28002595	3	+	28002483	28002483	8553170	1	112,	0,
#Partially deleted in new
chr22	28028814	28094135	chr22:28028814-28094135	0	-	28028986	28094135	789624	3	302,141,56,	0,1411,65265,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	28056152	28056453	chr22:28056152-28056453	3	-	28056152	28056152	8553170	1	301,	0,
#Deleted in new
chr22	28232755	28232823	chr22:28232755-28232823	3	-	28232755	28232755	8553170	1	68,	0,
#Partially deleted in new
chr22	28296213	28443073	chr22:28296213-28443073	0	-	28296213	28296213	8553170	4	115,273,148,188,	0,1366,10282,146672,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	28303753	28303850	chr22:28303753-28303850	3	+	28303753	28303753	8553170	1	97,	0,
#Partially deleted in new
chr22	28459868	28459948	chr22:28459868-28459948	3	+	28459868	28459868	5263520	1	80,	0,
#Partially deleted in new
chr22	28629427	28679812	chr22:28629427-28679812	0	-	28629427	28629427	8553170	2	403,191,	0,50194,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	28642978	28643270	chr22:28642978-28643270	3	-	28642978	28642978	8553170	1	292,	0,
#Partially deleted in new
chr22	28687742	28741834	chr22:28687742-28741834	1	-	28687896	28734721	0	14	244,81,86,116,164,100,62,54,109,91,148,125,325,66,	0,1392,6289,7384,7967,12095,15762,22263,24166,31652,37234,37500,46660,54026,
#Partially deleted in new
chr22	28687742	28741820	chr22:28687742-28741820	1	-	28687896	28734721	0	15	244,81,86,116,164,87,100,62,54,109,91,148,125,325,52,	0,1392,6289,7384,7967,9158,12095,15762,22263,24166,31652,37234,37500,46660,54026,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr22	28687742	28742422	chr22:28687742-28742422	0	-	28721599	28734721	789624	16	244,81,86,116,164,87,100,62,54,109,91,114,148,125,325,654,	0,1392,6289,7384,7967,9158,12095,15762,22263,24166,31652,33775,37234,37500,46660,54026,
#Partially deleted in new
chr22	28687742	28711931	chr22:28687742-28711931	0	-	28687896	28711931	789624	10	244,81,86,83,164,87,100,62,54,23,	0,1392,6289,7384,7967,9158,12095,15762,22263,24166,
#Partially deleted in new
chr22	28687742	28711955	chr22:28687742-28711955	0	-	28687896	28711955	789624	6	244,81,100,62,54,47,	0,1392,12095,15762,22263,24166,
#Partially deleted in new
chr22	28687743	28741844	chr22:28687743-28741844	3	-	28687896	28734721	0	15	243,81,86,116,164,87,100,62,54,109,91,148,125,325,76,	0,1391,6288,7383,7966,9157,12094,15761,22262,24165,31651,37233,37499,46659,54025,
#Partially deleted in new
chr22	28687743	28712495	chr22:28687743-28712495	0	-	28687743	28687743	8553170	11	243,81,86,116,164,87,100,62,54,109,235,	0,1391,6288,7383,7966,9157,12094,15761,22262,24165,24517,
#Partially deleted in new
chr22	28687748	28689410	chr22:28687748-28689410	0	-	28687748	28687748	8553170	2	238,276,	0,1386,
#Partially deleted in new
chr22	28687750	28741806	chr22:28687750-28741806	1	-	28687896	28719414	789624	12	236,81,86,116,164,87,100,62,54,109,91,38,	0,1384,6281,7376,7959,9150,12087,15754,22255,24158,31644,54018,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr22	28687761	28741800	chr22:28687761-28741800	1	-	28687896	28734721	0	16	225,81,86,116,164,87,100,62,54,109,91,148,125,325,154,32,	0,1373,6270,7365,7948,9139,12076,15743,22244,24147,31633,37215,37481,46641,50123,54007,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr22	28687762	28741838	chr22:28687762-28741838	1	-	28687896	28734721	0	16	224,81,86,116,164,87,100,62,54,109,91,148,125,129,325,70,	0,1372,6269,7364,7947,9138,12075,15742,22243,24146,31632,37214,37480,42657,46640,54006,
#Partially deleted in new
chr22	28687886	28734721	chr22:28687886-28734721	0	-	28711997	28734721	0	13	100,81,86,116,164,87,100,62,54,109,148,125,319,	0,1248,6145,7240,7823,9014,11951,15618,22119,24022,37090,37356,46516,
#Partially deleted in new
chr22	28687886	28734721	chr22:28687886-28734721	0	-	28699913	28734721	0	13	100,81,86,116,164,87,100,54,109,91,148,125,319,	0,1248,6145,7240,7823,9014,11951,22119,24022,31508,37090,37356,46516,
#Partially deleted in new
chr22	28687886	28734721	chr22:28687886-28734721	0	-	28719469	28734721	0	14	100,81,86,116,164,87,100,62,54,109,91,38,125,319,	0,1248,6145,7240,7823,9014,11951,15618,22119,24022,31508,36999,37356,46516,
#Partially deleted in new
chr22	28687896	28734721	chr22:28687896-28734721	1	-	28687896	28734721	0	13	90,81,86,116,164,100,62,54,109,91,148,125,319,	0,1238,6135,7230,7813,11941,15608,22109,24012,31498,37080,37346,46506,
#Partially deleted in new
chr22	28687896	28734721	chr22:28687896-28734721	1	-	28687896	28734721	0	12	90,81,86,116,164,87,100,62,54,109,91,319,	0,1238,6135,7230,7813,9004,11941,15608,22109,24012,31498,46506,
#Partially deleted in new
chr22	28696900	28734727	chr22:28696900-28734727	0	-	28696900	28734721	789624	8	87,100,62,54,109,38,125,325,	0,2937,6604,13105,15008,27985,28342,37502,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	28696901	28741806	chr22:28696901-28741806	0	-	28724881	28734721	789624	10	86,100,62,54,109,91,359,125,325,38,	0,2936,6603,13104,15007,22493,27663,28341,37501,44867,
#Partially deleted in new
chr22	28696922	28712146	chr22:28696922-28712146	0	-	28696922	28712134	789624	6	65,100,62,54,109,35,	0,2915,6582,13083,14986,15189,
#Partially deleted in new
chr22	28696943	28712257	chr22:28696943-28712257	0	-	28696943	28696943	8553170	5	44,100,62,54,349,	0,2894,6561,13062,14965,
#Partially deleted in new
chr22	28696967	28741811	chr22:28696967-28741811	0	-	28696967	28719414	789624	9	20,100,62,54,109,91,148,125,43,	0,2870,6537,13038,14941,22427,28009,28275,44801,
#Partially deleted in new
chr22	28699763	28725248	chr22:28699763-28725248	0	-	28711997	28725248	789624	6	174,62,54,109,148,6,	0,3741,10242,12145,25213,25479,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	28711908	28741783	chr22:28711908-28741783	0	-	28711908	28734721	789624	7	109,91,148,125,93,325,15,	0,7486,13068,13334,18547,22494,29860,
#Partially deleted in new
chr22	28721599	28741834	chr22:28721599-28741834	1	-	28721599	28734721	789624	5	32,148,125,325,66,	0,3377,3643,12803,20169,
#Partially deleted in new
chr22	28725040	28741820	chr22:28725040-28741820	0	-	28725040	28734721	8553170	4	84,125,325,39,	0,202,9362,16741,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	28725082	28741802	chr22:28725082-28741802	0	-	28725082	28734721	789624	6	42,125,325,64,123,34,	0,160,9320,12177,12833,16686,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	28742030	28757510	chr22:28742030-28757510	3	+	28742095	28757169	0	6	301,97,90,145,48,433,	0,1851,2584,3833,9210,15047,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	28742041	28757510	chr22:28742041-28757510	0	+	28742095	28744654	789624	6	290,42,90,145,48,433,	0,1840,2573,3822,9199,15036,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	28742054	28757515	chr22:28742054-28757515	1	+	28742095	28751244	789624	5	277,97,95,48,438,	0,1827,2560,9186,15023,
#Partially deleted in new
chr22	28742060	28757213	chr22:28742060-28757213	0	+	28742095	28745867	789624	6	271,97,95,145,48,136,	0,1821,2554,3803,9180,15017,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	28742150	28745543	chr22:28742150-28745543	0	+	28742150	28742150	8553170	4	181,97,90,288,	0,1731,2464,3105,
#Partially deleted in new
chr22	28742678	28757210	chr22:28742678-28757210	0	+	28742678	28742678	8553170	6	50,97,90,145,48,133,	0,1203,1936,3185,8562,14399,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	28742700	28757510	chr22:28742700-28757510	0	+	28742700	28742700	8553170	6	28,97,95,145,48,433,	0,1181,1914,3163,8540,14377,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	28772673	28789295	chr22:28772673-28789295	3	+	28772849	28786326	789624	5	361,54,225,138,3207,	0,1051,8274,10834,13415,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	28772673	28789301	chr22:28772673-28789301	1	+	28772849	28786326	789624	4	361,54,138,3213,	0,1051,10834,13415,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	28772673	28789301	chr22:28772673-28789301	1	+	28772849	28786326	789624	4	361,225,138,3213,	0,8274,10834,13415,
#Partially deleted in new
chr22	28772703	28786177	chr22:28772703-28786177	0	+	28772849	28773038	789624	5	520,54,225,138,89,	0,1021,8244,10804,13385,
#Partially deleted in new
chr22	28772727	28781103	chr22:28772727-28781103	0	+	28772849	28781103	789624	2	307,156,	0,8220,
#Partially deleted in new
chr22	28773240	28786093	chr22:28773240-28786093	0	+	28781104	28786093	789624	5	146,54,225,138,5,	0,484,7707,10267,12848,
#Partially deleted in new
chr22	28794554	28800597	chr22:28794554-28800597	3	-	28795545	28800524	789624	5	1178,146,129,97,300,	0,1492,2522,4502,5743,
#Partially deleted in new
chr22	28794556	28800558	chr22:28794556-28800558	1	-	28795545	28800524	789624	5	1176,146,129,112,261,	0,1490,2520,4485,5741,
#Deleted in new
chr22	28794558	28797045	chr22:28794558-28797045	0	-	28794558	28794558	8553170	2	1174,999,	0,1488,
#Partially deleted in new
chr22	28794559	28800572	chr22:28794559-28800572	1	-	28795174	28800524	789624	6	1173,77,43,129,97,275,	0,1487,1590,2517,4497,5738,
#Partially deleted in new
chr22	28794588	28800133	chr22:28794588-28800133	1	-	28795545	28800036	789624	5	1144,146,129,97,174,	0,1458,2488,4468,5371,
#Partially deleted in new
chr22	28795174	28800524	chr22:28795174-28800524	1	-	28795174	28800524	789624	6	558,75,45,129,97,227,	0,872,973,1902,3882,5123,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	28798905	28800569	chr22:28798905-28800569	0	-	28798905	28798905	8553170	2	248,272,	0,1392,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	28800682	28848559	chr22:28800682-28848559	3	+	28800682	28800682	8553170	4	55,208,73,169,	0,21289,43444,47708,
#Partially deleted in new
chr22	28800703	28839033	chr22:28800703-28839033	1	+	28800703	28800703	8553170	2	34,174,	0,38156,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	28800708	28801224	chr22:28800708-28801224	1	+	28800708	28800708	8553170	1	516,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	28801891	28822215	chr22:28801891-28822215	0	+	28801891	28801891	8553170	2	103,244,	0,20080,
#Deleted in new
chr22	28814913	28815662	chr22:28814913-28815662	3	+	28814913	28814913	8553170	1	749,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	28818330	28822215	chr22:28818330-28822215	1	+	28818330	28818330	8553170	2	165,244,	0,3641,
#Deleted in new
chr22	28835892	28836137	chr22:28835892-28836137	7	-	28835892	28835892	16724991	1	245,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	28883591	29057487	chr22:28883591-29057487	1	+	28883766	29053622	789624	9	475,126,75,132,111,168,103,1752,3909,	0,103484,158903,159707,161188,163124,164797,165605,169987,
#Partially deleted in new
chr22	28917388	29053685	chr22:28917388-29053685	3	+	28987075	29053622	789624	9	93,126,75,132,111,168,103,1752,107,	0,69687,125106,125910,127391,129327,131000,131808,136190,
#Partially deleted in new
chr22	28987051	29053965	chr22:28987051-29053965	1	+	28987075	29053622	789624	8	150,75,132,111,168,103,1752,387,	0,55443,56247,57728,59664,61337,62145,66527,
#Partially deleted in new
chr22	28992720	29018620	chr22:28992720-29018620	3	+	28992720	28992720	8553170	2	217,457,	0,25443,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	29024998	29031476	chr22:29024998-29031476	3	-	29024998	29024998	5263520	3	2011,73,86,	0,6085,6392,
#Partially deleted in new
chr22	29058671	29061844	chr22:29058671-29061844	3	-	29058741	29061792	789624	3	511,429,55,	0,1743,3118,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	29073077	29146820	chr22:29073077-29146820	3	+	29073130	29142112	0	9	150,163,92,125,154,333,159,85,4877,	0,21180,25784,48279,52185,64264,65546,67204,68866,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	29073117	29168333	chr22:29073117-29168333	1	+	29073130	29167106	0	10	110,163,92,125,154,333,210,85,157,1290,	0,21140,25744,48239,52145,64224,65506,67164,68826,93926,
#Partially deleted in new
chr22	29073130	29142112	chr22:29073130-29142112	1	+	29073130	29142112	0	9	91,163,92,125,154,333,210,85,169,	0,21127,25731,48226,52132,64211,65493,67151,68813,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	29099040	29111683	chr22:29099040-29111683	3	-	29099040	29099040	8553170	2	436,103,	0,12540,
#Partially deleted in new
chr22	29121440	29138771	chr22:29121440-29138771	0	+	29121440	29137554	789624	4	41,154,173,148,	0,3822,16061,17183,
#Partially deleted in new
chr22	29125196	29138642	chr22:29125196-29138642	0	+	29125196	29125196	8553170	3	220,333,19,	0,12145,13427,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	29134013	29134120	chr22:29134013-29134120	3	+	29134013	29134013	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	29142029	29154769	chr22:29142029-29154769	0	+	29142029	29142029	8553170	2	71,432,	0,12308,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	29191696	29191808	chr22:29191696-29191808	3	-	29191696	29191696	8553170	1	112,	0,
#Partially deleted in new
chr22	29205850	29259597	chr22:29205850-29259597	3	+	29206038	29258944	789624	15	289,114,104,84,62,121,90,147,90,53,63,45,45,85,781,	0,9075,9676,19282,20639,25169,25742,26405,27528,27763,28286,28454,37594,48352,52966,
#Partially deleted in new
chr22	29205905	29233428	chr22:29205905-29233428	0	+	29206038	29233428	789624	7	234,114,104,84,62,121,50,	0,9020,9621,19227,20584,25114,27473,
#Partially deleted in new
chr22	29205911	29259597	chr22:29205911-29259597	1	+	29206038	29258944	789624	14	228,114,104,84,62,121,90,147,90,53,45,45,85,781,	0,9014,9615,19221,20578,25108,25681,26344,27467,27702,28393,37533,48291,52905,
#Partially deleted in new
chr22	29205911	29259597	chr22:29205911-29259597	1	+	29206038	29258944	789624	15	228,114,104,84,62,121,90,147,90,53,63,45,45,91,781,	0,9014,9615,19221,20578,25108,25681,26344,27467,27702,28225,28393,37533,49359,52905,
#Partially deleted in new
chr22	29205922	29231615	chr22:29205922-29231615	0	+	29206038	29231615	789624	6	217,114,104,62,121,23,	0,9003,9604,20567,25097,25670,
#Partially deleted in new
chr22	29205958	29232345	chr22:29205958-29232345	0	+	29206038	29231023	789624	4	181,121,90,90,	0,25061,25634,26297,
#Partially deleted in new
chr22	29215576	29233667	chr22:29215576-29233667	0	+	29215576	29215576	8553170	8	54,84,130,121,90,147,90,54,	0,9556,10845,15443,16016,16679,17802,18037,
#Partially deleted in new
chr22	29231017	29243489	chr22:29231017-29243489	0	+	29231017	29243489	789624	9	123,51,90,147,90,53,63,45,45,	0,440,575,1238,2361,2596,3119,3287,12427,
#Partially deleted in new
chr22	29231681	29233862	chr22:29231681-29233862	0	+	29231681	29231681	8553170	2	1787,249,	0,1932,
#Partially deleted in new
chr22	29232335	29255612	chr22:29232335-29255612	0	+	29232335	29232335	8553170	8	67,90,53,63,45,45,85,342,	0,1043,1278,1801,1969,11109,21867,22935,
#Partially deleted in new
chr22	29233345	29254805	chr22:29233345-29254805	0	+	29233345	29233345	8553170	6	123,53,63,45,45,603,	0,268,791,959,10099,20857,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	29259851	29267978	chr22:29259851-29267978	3	-	29260059	29265626	789624	7	386,288,163,384,190,152,231,	0,474,850,3983,5627,7574,7896,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	29259903	29267945	chr22:29259903-29267945	0	-	29261303	29265626	789624	7	334,288,167,226,190,152,198,	0,422,798,1296,5575,7522,7844,
#Partially deleted in new
chr22	29260498	29264401	chr22:29260498-29264401	0	-	29260498	29260498	8553170	3	115,167,567,	0,203,3336,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	29260811	29268209	chr22:29260811-29268209	0	-	29260811	29265626	789624	5	53,384,190,152,121,	0,3023,4667,6614,7277,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	29260888	29262037	chr22:29260888-29262037	3	+	29260888	29260888	8553170	2	191,194,	0,955,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	29263956	29267728	chr22:29263956-29267728	0	-	29263956	29265626	789624	3	262,190,303,	0,1522,3469,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	29265034	29267960	chr22:29265034-29267960	0	-	29265034	29265034	8553170	3	634,152,213,	0,2391,2713,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	29265445	29267921	chr22:29265445-29267921	0	-	29265445	29265445	8553170	3	223,243,174,	0,1889,2302,
#Partially deleted in new
chr22	29268008	29300522	chr22:29268008-29300522	1	+	29268336	29300161	789624	17	341,37,52,124,187,168,212,76,35,33,119,130,123,163,98,253,401,	0,4207,4371,5732,10021,14381,18914,20978,23556,24128,24479,28230,29818,30724,31225,31590,32113,
#Partially deleted in new
chr22	29268008	29278041	chr22:29268008-29278041	0	+	29268336	29278041	789624	5	341,37,46,124,12,	0,4207,4377,5732,10021,
#Partially deleted in new
chr22	29268008	29300524	chr22:29268008-29300524	1	+	29268336	29300161	789624	15	341,37,52,127,187,168,212,33,119,130,123,163,98,253,403,	0,4207,4371,5729,10021,14381,18914,24128,24479,28230,29818,30724,31225,31590,32113,
#Partially deleted in new
chr22	29268017	29300525	chr22:29268017-29300525	1	+	29268336	29300161	0	17	332,37,52,124,187,168,212,181,38,33,119,130,123,163,98,253,404,	0,4198,4362,5723,10012,14372,18905,20588,23544,24119,24470,28221,29809,30715,31216,31581,32104,
#Partially deleted in new
chr22	29268252	29282424	chr22:29268252-29282424	0	+	29268336	29282424	789624	7	97,37,52,127,18,187,35,	0,3963,4127,5485,6012,9777,14137,
#Partially deleted in new
chr22	29268252	29282456	chr22:29268252-29282456	0	+	29268336	29282456	789624	7	97,37,52,127,15,187,67,	0,3963,4127,5485,6015,9777,14137,
#Partially deleted in new
chr22	29268272	29300336	chr22:29268272-29300336	1	+	29268336	29300161	0	17	77,37,52,124,187,168,212,181,35,33,119,130,123,163,98,253,215,	0,3943,4107,5468,9757,14117,18650,20333,23292,23864,24215,27966,29554,30460,30961,31326,31849,
#Deleted in new
chr22	29268272	29274453	chr22:29268272-29274453	0	+	29268272	29268272	8553170	5	77,37,52,124,189,	0,3943,4107,5468,5992,
#Partially deleted in new
chr22	29268281	29288687	chr22:29268281-29288687	0	+	29268336	29288687	789624	8	68,37,52,127,187,168,212,82,	0,3934,4098,5456,9748,14108,18641,20324,
#Partially deleted in new
chr22	29268289	29287106	chr22:29268289-29287106	0	+	29268336	29287106	789624	6	60,37,52,86,168,184,	0,3926,4090,9841,14100,18633,
#Partially deleted in new
chr22	29268290	29300525	chr22:29268290-29300525	1	+	29268336	29300161	789624	15	59,37,52,124,187,168,212,150,107,130,123,163,98,253,404,	0,3925,4089,5450,9739,14099,18632,20315,24209,27948,29536,30442,30943,31308,31831,
#Partially deleted in new
chr22	29268312	29291019	chr22:29268312-29291019	0	+	29268312	29268312	8553170	8	37,37,52,124,187,168,212,2414,	0,3903,4067,5428,9717,14077,18610,20293,
#Partially deleted in new
chr22	29268315	29300343	chr22:29268315-29300343	3	+	29268336	29300161	0	18	34,37,52,124,18,187,168,212,181,35,33,119,130,123,163,98,253,222,	0,3900,4064,5425,5949,9714,14074,18607,20290,23249,23821,24172,27923,29511,30417,30918,31283,31806,
#Partially deleted in new
chr22	29268317	29290684	chr22:29268317-29290684	1	+	29268336	29290503	0	9	32,37,52,124,187,168,212,181,272,	0,3898,4062,5423,9712,14072,18605,20288,22095,
#Partially deleted in new
chr22	29268325	29300336	chr22:29268325-29300336	1	+	29268336	29300161	0	16	24,37,52,124,187,212,181,38,33,119,130,123,163,98,253,215,	0,3890,4054,5415,9704,18597,20280,23236,23811,24162,27913,29501,30407,30908,31273,31796,
#Partially deleted in new
chr22	29268325	29288679	chr22:29268325-29288679	0	+	29268336	29288679	789624	7	24,37,52,124,187,212,74,	0,3890,4054,5415,9704,18597,20280,
#Deleted in new
chr22	29269222	29273792	chr22:29269222-29273792	0	+	29269222	29269222	8553170	4	440,37,52,52,	0,2993,3157,4518,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	29275628	29300525	chr22:29275628-29300525	0	+	29275628	29275628	8553170	12	2588,168,212,2994,33,119,130,123,163,98,253,404,	0,6761,11294,12977,16508,16859,20610,22198,23104,23605,23970,24493,
#Partially deleted in new
chr22	29290829	29300525	chr22:29290829-29300525	0	+	29290829	29290829	8553170	8	1340,119,130,123,163,98,253,404,	0,1658,5409,6997,7903,8404,8769,9292,
#Partially deleted in new
chr22	29291928	29300525	chr22:29291928-29300525	0	+	29291928	29291928	8553170	7	241,119,130,123,548,253,404,	0,559,4310,5898,6804,7670,8193,
#Partially deleted in new
chr22	29292158	29300525	chr22:29292158-29300525	0	+	29292158	29300161	789624	8	11,119,130,123,163,86,253,404,	0,329,4080,5668,6574,7036,7440,7963,
#Partially deleted in new
chr22	29295525	29300336	chr22:29295525-29300336	0	+	29295525	29295525	8553170	4	843,123,1119,215,	0,2301,3207,4596,
#Partially deleted in new
chr22	29306581	29312785	chr22:29306581-29312785	3	+	29308105	29312497	789624	6	572,652,108,97,172,1324,	0,1505,3857,4056,4245,4880,
#Partially deleted in new
chr22	29306617	29308520	chr22:29306617-29308520	0	+	29308105	29308520	789624	3	152,159,434,	0,377,1469,
#Partially deleted in new
chr22	29306649	29308535	chr22:29306649-29308535	0	+	29308105	29308535	789624	2	120,449,	0,1437,
#Partially deleted in new
chr22	29307022	29312785	chr22:29307022-29312785	1	+	29308105	29312497	789624	6	131,652,108,97,172,643,	0,1064,3416,3615,3804,5120,
#Partially deleted in new
chr22	29307040	29312094	chr22:29307040-29312094	1	+	29308105	29311002	789624	5	113,652,108,97,1268,	0,1046,3398,3597,3786,
#Partially deleted in new
chr22	29307051	29312785	chr22:29307051-29312785	1	+	29308105	29312497	789624	6	102,680,108,97,172,1324,	0,1007,3387,3586,3775,4410,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	29307057	29307799	chr22:29307057-29307799	0	+	29307057	29307057	8553170	2	96,454,	0,288,
#Partially deleted in new
chr22	29307057	29312785	chr22:29307057-29312785	1	+	29308105	29312497	789624	6	129,652,108,97,172,1324,	0,1029,3381,3580,3769,4404,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	29307057	29312785	chr22:29307057-29312785	1	+	29308105	29312497	789624	5	1681,108,97,172,1324,	0,3381,3580,3769,4404,
#Deleted in new
chr22	29310278	29311107	chr22:29310278-29311107	0	+	29310278	29310278	8553170	3	268,97,281,	0,359,548,
#Deleted in new
chr22	29312932	29315756	chr22:29312932-29315756	3	-	29313300	29315246	789624	3	636,125,729,	0,930,2095,
#Deleted in new
chr22	29312932	29315692	chr22:29312932-29315692	1	-	29313858	29315246	789624	2	1055,665,	0,2095,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	29313502	29319679	chr22:29313502-29319679	0	-	29313502	29313502	8553170	3	66,125,371,	0,360,5806,
#Deleted in new
chr22	29313534	29314306	chr22:29313534-29314306	0	-	29313534	29313534	8553170	2	453,85,	0,687,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	29316743	29317220	chr22:29316743-29317220	3	-	29316743	29316743	8553170	1	477,	0,
#Deleted in new
chr22	29327679	29332321	chr22:29327679-29332321	0	-	29327679	29327679	8553170	4	2853,87,85,535,	0,2943,3769,4107,
#Partially deleted in new
chr22	29327681	29388583	chr22:29327681-29388583	3	-	29328820	29367243	789624	23	1214,9,155,87,85,130,146,144,21,202,260,99,166,116,96,121,222,191,246,136,106,64,160,	0,2030,2696,2941,3767,4105,6583,11308,12072,12974,13819,14603,21536,22353,23489,24023,26968,28744,31044,32142,35319,39525,60742,
#Partially deleted in new
chr22	29327681	29388583	chr22:29327681-29388583	1	-	29328820	29367243	789624	21	1214,155,87,85,130,146,144,202,260,99,166,116,96,121,222,191,246,136,106,64,160,	0,2696,2941,3767,4105,6583,11308,12974,13819,14603,21536,22353,23489,24023,26968,28744,31044,32142,35319,39525,60742,
#Partially deleted in new
chr22	29327864	29388583	chr22:29327864-29388583	1	-	29328820	29367243	789624	21	1031,155,87,85,130,86,144,202,260,99,166,116,96,121,222,191,246,136,106,64,160,	0,2513,2758,3584,3922,6400,11125,12791,13636,14420,21353,22170,23306,23840,26785,28561,30861,31959,35136,39342,60559,
#Partially deleted in new
chr22	29327864	29367275	chr22:29327864-29367275	1	-	29328820	29367243	789624	22	1031,9,155,87,85,130,146,144,21,202,260,99,166,116,96,121,222,191,246,136,106,69,	0,1847,2513,2758,3584,3922,6400,11125,11889,12791,13636,14420,21353,22170,23306,23840,26785,28561,30861,31959,35136,39342,
#Partially deleted in new
chr22	29328737	29367275	chr22:29328737-29367275	1	-	29328820	29367243	789624	20	158,155,87,85,130,146,144,202,260,99,166,116,96,121,222,191,246,136,106,69,	0,1640,1885,2711,3049,5527,10252,11918,12763,13547,20480,21297,22433,22967,25912,27688,29988,31086,34263,38469,
#Partially deleted in new
chr22	29328820	29423179	chr22:29328820-29423179	1	-	29328820	29423161	789624	20	75,155,87,85,130,146,144,202,260,99,166,116,96,121,222,191,246,136,106,55,	0,1557,1802,2628,2966,5444,10169,11835,12680,13464,20397,21214,22350,22884,25829,27605,29905,31003,90334,94304,
#Partially deleted in new
chr22	29331456	29340837	chr22:29331456-29340837	0	-	29331456	29331456	8553170	5	125,130,146,144,182,	0,330,2808,7533,9199,
#Deleted in new
chr22	29333157	29333267	chr22:29333157-29333267	3	-	29333157	29333157	5263520	1	110,	0,
#Deleted in new
chr22	29333162	29333258	chr22:29333162-29333258	3	-	29333162	29333162	789624	1	96,	0,
#Partially deleted in new
chr22	29341562	29370659	chr22:29341562-29370659	0	-	29341562	29367243	789624	13	198,99,166,116,96,121,222,191,246,136,106,64,147,	0,722,7655,8472,9608,10142,13087,14863,17163,18261,21438,25644,28950,
#Partially deleted in new
chr22	29349272	29351747	chr22:29349272-29351747	0	-	29349272	29351747	789624	4	111,116,249,43,	0,762,1898,2432,
#Partially deleted in new
chr22	29359672	29388529	chr22:29359672-29388529	0	-	29359672	29359672	8553170	4	287,106,61,106,	0,3328,7534,28751,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	29387908	29417757	chr22:29387908-29417757	7	+	29387908	29387908	16724991	7	188,75,65,65,28,481,746,	0,18894,20594,21665,22268,22789,29103,
#Partially deleted in new
chr22	29419154	29423193	chr22:29419154-29423193	7	-	29419154	29419154	16724991	2	106,69,	0,3970,
#Partially deleted in new
chr22	29432943	29435005	chr22:29432943-29435005	7	+	29432943	29432943	16724991	3	55,217,574,	0,387,1488,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	29436533	29478175	chr22:29436533-29478175	0	-	29436533	29436533	8553170	3	5596,141,166,	0,35772,41476,
#Partially deleted in new
chr22	29438582	29442455	chr22:29438582-29442455	3	+	29438791	29442122	789624	2	582,914,	0,2959,
#Deleted in new
chr22	29441339	29441678	chr22:29441339-29441678	7	-	29441339	29441339	16724991	4	50,42,81,157,	0,54,98,182,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	29471940	29478070	chr22:29471940-29478070	0	-	29471940	29471940	8553170	2	509,61,	0,6069,
#Deleted in new
chr22	29480219	29481113	chr22:29480219-29481113	3	-	29480219	29480219	8553170	2	23,320,	0,574,
#Partially deleted in new
chr22	29480229	29491390	chr22:29480229-29491390	3	+	29480262	29490703	789624	4	916,200,125,2542,	0,3145,5493,8619,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr22	29505878	29553782	chr22:29505878-29553782	3	-	29508456	29549147	789624	20	2642,191,116,88,104,115,97,102,109,100,41,78,133,115,147,98,114,144,107,112,	0,5227,6142,11150,11384,13127,14129,15119,19959,22199,22547,23283,25952,30745,33451,36980,37550,38581,43173,47792,
#Partially deleted in new
chr22	29508167	29553655	chr22:29508167-29553655	1	-	29508456	29549147	789624	20	353,191,116,88,104,115,97,102,109,100,41,78,133,115,147,98,114,144,107,208,	0,2938,3853,8861,9095,10838,11840,12830,17670,19910,20258,20994,23663,28456,31162,34691,35261,36292,40884,45280,
#Partially deleted in new
chr22	29508167	29553655	chr22:29508167-29553655	1	-	29508456	29549147	789624	21	353,191,116,88,104,115,97,102,109,100,41,78,133,115,147,98,114,144,107,116,208,	0,2938,3853,8861,9095,10838,11840,12830,17670,19910,20258,20994,23663,28456,31162,34691,35261,36292,40884,42560,45280,
#Partially deleted in new
chr22	29508326	29554254	chr22:29508326-29554254	0	-	29528326	29549147	789624	23	194,191,116,88,104,115,97,102,109,100,86,41,78,33,133,115,147,98,114,144,107,116,584,	0,2779,3694,8702,8936,10679,11681,12671,17511,19751,19947,20099,20835,22751,23504,28297,31003,34532,35102,36133,40725,42401,45344,
#Partially deleted in new
chr22	29508328	29511442	chr22:29508328-29511442	0	-	29508328	29508328	8553170	2	192,337,	0,2777,
#Partially deleted in new
chr22	29508330	29549157	chr22:29508330-29549157	0	-	29542940	29549147	789624	19	190,191,116,88,104,115,97,102,109,100,41,303,133,115,147,98,128,144,106,	0,2775,3690,8698,8932,10675,11677,12667,17507,19747,20095,20606,23500,28293,30999,34528,35084,36129,40721,
#Partially deleted in new
chr22	29508357	29553766	chr22:29508357-29553766	1	-	29508456	29549147	789624	21	163,191,116,88,104,115,97,102,109,100,41,78,133,115,147,98,114,144,107,116,96,	0,2748,3663,8671,8905,10648,11650,12640,17480,19720,20068,20804,23473,28266,30972,34501,35071,36102,40694,42370,45313,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	29513888	29535390	chr22:29513888-29535390	3	-	29513888	29513888	8553170	2	128,161,	0,21341,
#Partially deleted in new
chr22	29519005	29536738	chr22:29519005-29536738	0	-	29519005	29519005	8553170	8	115,97,102,109,100,193,78,115,	0,1002,1992,6832,9072,9268,10156,17618,
#Partially deleted in new
chr22	29525837	29542888	chr22:29525837-29542888	0	-	29525837	29542888	789624	9	109,100,41,78,33,133,115,147,30,	0,2240,2588,3324,5240,5993,10786,13492,17021,
#Partially deleted in new
chr22	29528382	29539469	chr22:29528382-29539469	0	-	29528382	29528382	8553170	5	84,78,133,115,140,	0,779,3448,8241,10947,
#Partially deleted in new
chr22	29531552	29536738	chr22:29531552-29536738	0	-	29531552	29531552	8553170	2	411,115,	0,5071,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	29534537	29549144	chr22:29534537-29549144	0	-	29534537	29534537	8553170	7	394,945,147,98,114,144,93,	0,1256,4792,8321,8891,9922,14514,
#Partially deleted in new
chr22	29536666	29553655	chr22:29536666-29553655	0	-	29536666	29549147	789624	8	72,147,98,114,144,107,116,208,	0,2663,6192,6762,7793,12385,14061,16781,
#Partially deleted in new
chr22	29539443	29553680	chr22:29539443-29553680	0	-	29539443	29549147	789624	6	33,98,114,144,107,233,	0,3415,3985,5016,9608,14004,
#Partially deleted in new
chr22	29542953	29553741	chr22:29542953-29553741	0	-	29544496	29549147	789624	7	3,114,49,24,107,116,71,	0,475,1506,1626,6098,7774,10717,
#Partially deleted in new
chr22	29543502	29555216	chr22:29543502-29555216	0	-	29543502	29549147	789624	6	40,144,107,116,173,158,	0,957,5549,7225,10168,11556,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	29554807	29581337	chr22:29554807-29581337	3	-	29555934	29581082	789624	10	1192,84,95,32,141,71,95,46,128,353,	0,4062,5926,6363,6698,6984,14385,15354,15597,26177,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	29560807	29581327	chr22:29560807-29581327	0	-	29560807	29561824	789624	8	21,32,141,71,95,46,128,140,	0,363,698,984,8385,9354,9597,20380,
#Partially deleted in new
chr22	29561169	29581074	chr22:29561169-29581074	0	-	29561169	29581074	789624	8	33,141,71,95,46,128,57,90,	0,336,622,8023,8992,9235,18929,19815,
#Partially deleted in new
chr22	29561629	29581093	chr22:29561629-29581093	0	-	29564351	29581082	789624	7	17,71,134,95,46,128,109,	0,162,2608,7563,8532,8775,19355,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	29569865	29581100	chr22:29569865-29581100	0	-	29569865	29569865	8553170	3	342,128,116,	0,539,11119,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	29579756	29581026	chr22:29579756-29581026	0	-	29579756	29579756	8553170	2	399,42,	0,1228,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	29603555	29698594	chr22:29603555-29698594	1	+	29603998	29694802	0	5	557,126,123,84,3843,	0,33195,35534,38646,91196,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr22	29603557	29698598	chr22:29603557-29698598	3	+	29603998	29694802	0	16	555,126,123,84,69,83,76,135,75,114,123,218,106,128,163,3847,	0,33193,35532,38644,51099,52036,54631,57647,61432,64775,68268,69711,71278,74638,77881,91194,
#Partially deleted in new
chr22	29603587	29684162	chr22:29603587-29684162	1	+	29603998	29683055	0	17	525,126,123,84,69,83,76,135,75,114,36,218,106,128,163,45,462,	0,33163,35502,38614,51069,52006,54601,57617,61402,64745,68325,69681,71248,74608,77851,79432,80113,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr22	29603616	29698594	chr22:29603616-29698594	1	+	29603998	29683055	0	16	496,126,84,69,83,76,135,75,114,123,218,106,128,163,45,3843,	0,33134,38585,51040,51977,54572,57588,61373,64716,68209,69652,71219,74579,77822,79403,91135,
#Partially deleted in new
chr22	29603632	29683915	chr22:29603632-29683915	1	+	29603998	29683055	0	16	480,126,123,84,69,83,76,135,75,114,123,218,106,128,163,896,	0,33118,35457,38569,51024,51961,54556,57572,61357,64700,68193,69636,71203,74563,77806,79387,
#Partially deleted in new
chr22	29603726	29683915	chr22:29603726-29683915	1	+	29603998	29683055	0	15	386,84,69,83,76,135,75,114,123,218,106,128,163,45,215,	0,38475,50930,51867,54462,57478,61263,64606,68099,69542,71109,74469,77712,79293,79974,
#Partially deleted in new
chr22	29603746	29694811	chr22:29603746-29694811	1	+	29603998	29683055	0	15	366,84,69,83,76,135,75,114,123,218,106,128,163,45,60,	0,38455,50910,51847,54442,57458,61243,64586,68079,69522,71089,74449,77692,79273,91005,
#Partially deleted in new
chr22	29603948	29694945	chr22:29603948-29694945	0	+	29603998	29678230	0	8	164,84,135,75,114,106,128,194,	0,38253,57256,61041,64384,70887,74247,90803,
#Partially deleted in new
chr22	29603998	29694806	chr22:29603998-29694806	1	+	29603998	29683055	0	17	114,126,123,84,69,83,76,135,75,114,123,218,106,128,163,45,55,	0,32752,35091,38203,50658,51595,54190,57206,60991,64334,67827,69270,70837,74197,77440,79021,90753,
#Partially deleted in new
chr22	29603998	29694811	chr22:29603998-29694811	1	+	29603998	29683055	0	16	114,123,84,69,83,76,135,75,114,123,218,106,128,163,45,60,	0,35091,38203,50658,51595,54190,57206,60991,64334,67827,69270,70837,74197,77440,79021,90753,
#Partially deleted in new
chr22	29603998	29694811	chr22:29603998-29694811	1	+	29603998	29683055	0	17	114,126,123,84,69,83,76,135,75,114,123,218,106,128,163,60,60,	0,32752,35091,38203,50658,51595,54190,57206,60991,64334,67827,69270,70837,74197,77440,79021,90753,
#Deleted in new
chr22	29608899	29609501	chr22:29608899-29609501	7	+	29608899	29608899	16724991	1	602,	0,
#Partially deleted in new
chr22	29705255	29719859	chr22:29705255-29719859	3	-	29705255	29705255	8553170	3	174,104,312,	0,875,14292,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	29711812	29719748	chr22:29711812-29719748	0	-	29711812	29711812	8553170	2	183,201,	0,7735,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	29711819	29719714	chr22:29711819-29719714	3	-	29711819	29711819	8553170	2	98,146,	0,7749,
#Partially deleted in new
chr22	29720083	29731839	chr22:29720083-29731839	3	+	29720424	29729569	0	5	450,144,113,154,2398,	0,7578,8546,8971,9358,
#Partially deleted in new
chr22	29730955	29766961	chr22:29730955-29766961	3	-	29731224	29748544	789624	6	399,112,81,63,154,90,	0,7374,9694,11462,17462,35916,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	29746166	29767011	chr22:29746166-29767011	0	-	29746166	29746166	8553170	2	2405,63,	0,20782,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	29758757	29758859	chr22:29758757-29758859	3	+	29758757	29758757	8553170	1	102,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	29767368	29770413	chr22:29767368-29770413	3	+	29767398	29769719	0	2	180,736,	0,2309,
#Partially deleted in new
chr22	29767373	29770027	chr22:29767373-29770027	1	+	29767398	29767587	0	2	234,350,	0,2304,
#Partially deleted in new
chr22	29788607	29838274	chr22:29788607-29838274	3	-	29789012	29832325	0	20	577,80,103,131,100,120,215,193,75,69,108,75,113,111,68,130,171,159,98,97,	0,1861,3825,4752,4969,12383,13386,16030,17608,17877,18189,19503,24822,26049,27398,33727,36479,37014,43637,49570,
#Partially deleted in new
chr22	29788608	29838304	chr22:29788608-29838304	1	-	29789012	29832325	0	19	576,80,103,131,100,120,215,193,75,69,108,75,113,111,68,61,171,98,127,	0,1860,3824,4751,4968,12382,13385,16029,17607,17876,18188,19502,24821,26048,27397,33726,36478,43636,49569,
#Partially deleted in new
chr22	29788610	29804824	chr22:29788610-29804824	0	-	29788610	29788610	8553170	7	574,80,103,317,120,215,187,	0,1858,3822,4749,12380,13383,16027,
#Partially deleted in new
chr22	29788612	29813542	chr22:29788612-29813542	0	-	29788612	29788612	8553170	4	240,108,75,113,	0,18184,19498,24817,
#Partially deleted in new
chr22	29788615	29834550	chr22:29788615-29834550	0	-	29827567	29832325	789624	21	569,80,103,131,100,120,94,193,75,69,108,75,113,111,68,130,171,159,124,98,62,	0,1853,3817,4744,4961,12375,13499,16022,17600,17869,18181,19495,24814,26041,27390,33719,36471,37006,38861,43629,45873,
#Partially deleted in new
chr22	29788641	29838276	chr22:29788641-29838276	1	-	29789012	29832325	0	21	543,80,103,131,100,120,215,193,75,69,108,75,113,111,68,130,171,159,98,62,99,	0,1827,3791,4718,4935,12349,13352,15996,17574,17843,18155,19469,24788,26015,27364,33693,36445,36980,43603,45847,49536,
#Partially deleted in new
chr22	29793576	29802102	chr22:29793576-29802102	0	-	29793576	29802102	789624	3	100,120,41,	0,7414,8485,
#Partially deleted in new
chr22	29793586	29799302	chr22:29793586-29799302	0	-	29793586	29793586	8553170	2	90,108,	0,5608,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	29806213	29816740	chr22:29806213-29816740	0	-	29806213	29806213	8553170	9	77,69,108,75,113,111,118,68,88,	0,271,583,1897,7216,8443,8958,9792,10439,
#Partially deleted in new
chr22	29806835	29810288	chr22:29806835-29810288	0	-	29806835	29806835	8553170	3	69,75,394,	0,1275,3059,
#Partially deleted in new
chr22	29813470	29838272	chr22:29813470-29838272	0	-	29814679	29832325	789624	7	72,111,68,98,74,62,95,	0,1186,2535,18774,20070,21018,24707,
#Partially deleted in new
chr22	29814656	29834550	chr22:29814656-29834550	0	-	29814656	29832325	789624	8	111,68,130,171,159,98,74,62,	0,1349,7678,10430,10965,17588,18884,19832,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	29815205	29838274	chr22:29815205-29838274	0	-	29815205	29815205	8553170	5	88,68,130,171,97,	0,800,7129,9881,22972,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	29821891	29832342	chr22:29821891-29832342	0	-	29821891	29821891	8553170	5	184,130,171,159,98,	0,443,3195,3730,10353,
#Partially deleted in new
chr22	29822141	29838228	chr22:29822141-29838228	0	-	29822141	29822141	8553170	6	323,171,159,98,74,51,	0,2945,3480,10103,11399,16036,
#Partially deleted in new
chr22	29822351	29825358	chr22:29822351-29825358	0	-	29822351	29822351	8553170	2	113,272,	0,2735,
#Partially deleted in new
chr22	29825086	29838274	chr22:29825086-29838274	0	-	29825086	29825086	8553170	4	171,159,109,97,	0,535,9355,13091,
#Partially deleted in new
chr22	29825102	29832580	chr22:29825102-29832580	0	-	29825102	29825102	8553170	2	155,336,	0,7142,
#Partially deleted in new
chr22	29825107	29838261	chr22:29825107-29838261	0	-	29833597	29838261	789624	5	150,159,74,62,84,	0,514,8433,9381,13070,
#Partially deleted in new
chr22	29825160	29838282	chr22:29825160-29838282	0	-	29825160	29825160	8553170	5	97,159,98,109,105,	0,461,7084,9281,13017,
#Deleted in new
chr22	29825213	29826131	chr22:29825213-29826131	0	-	29825213	29825213	8553170	2	44,510,	0,408,
#Partially deleted in new
chr22	29825693	29838274	chr22:29825693-29838274	0	-	29827567	29832325	789624	5	87,124,98,63,97,	0,1783,6551,10744,12484,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	29834085	29838274	chr22:29834085-29838274	0	-	29834085	29834085	8553170	2	465,97,	0,4092,
#Partially deleted in new
chr22	29883154	30027880	chr22:29883154-30027880	3	+	29971059	30025801	789624	20	205,53,87,90,117,83,167,97,114,206,132,112,196,186,171,146,1405,111,89,2251,	0,73881,87821,95287,95781,105325,108349,115606,119725,123959,124746,125863,129213,130201,133373,134772,136325,138874,139454,142475,
#Partially deleted in new
chr22	29883168	30030866	chr22:29883168-30030866	1	+	29971059	30025801	789624	20	191,53,87,90,117,83,167,97,114,206,132,112,196,186,171,146,1405,89,27,5237,	0,73867,87807,95273,95767,105311,108335,115592,119711,123945,124732,125849,129199,130187,133359,134758,136311,139440,140288,142461,
#Partially deleted in new
chr22	29883178	29978968	chr22:29883178-29978968	0	+	29883178	29883178	8553170	5	181,53,87,107,33,	0,73857,87797,95246,95757,
#Partially deleted in new
chr22	29883196	29991628	chr22:29883196-29991628	0	+	29971059	29991628	789624	6	163,87,90,117,83,125,	0,87779,95245,95739,105283,108307,
#Partially deleted in new
chr22	29883197	30027858	chr22:29883197-30027858	1	+	29991618	30025801	789624	19	162,53,90,117,83,167,97,114,206,132,112,196,186,171,146,1405,111,89,2229,	0,73838,95244,95738,105282,108306,115563,119682,123916,124703,125820,129170,130158,133330,134729,136282,138831,139411,142432,
#Partially deleted in new
chr22	29883212	30026495	chr22:29883212-30026495	1	+	29971059	30025801	789624	19	147,53,87,90,117,83,167,97,114,206,132,112,196,186,171,146,1405,89,866,	0,73823,87763,95229,95723,105267,108291,115548,119667,123901,124688,125805,129155,130143,133315,134714,136267,139396,142417,
#Partially deleted in new
chr22	29883268	29991669	chr22:29883268-29991669	0	+	29883268	29883268	8553170	6	91,53,87,90,117,166,	0,73767,87707,95173,95667,108235,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	29899586	29899693	chr22:29899586-29899693	3	-	29899586	29899586	8553170	1	107,	0,
#Partially deleted in new
chr22	29971050	30026037	chr22:29971050-30026037	1	+	29971059	30025801	789624	18	12,90,117,83,167,97,114,206,132,112,196,186,171,146,1405,89,27,408,	0,7391,7885,17429,20453,27710,31829,36063,36850,37967,41317,42305,45477,46876,48429,51558,52406,54579,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	29978086	29979037	chr22:29978086-29979037	0	+	29978086	29978086	8553170	2	445,102,	0,849,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	29978949	30028236	chr22:29978949-30028236	3	-	29978949	29978949	8553170	1	49287,	0,
#Partially deleted in new
chr22	30003894	30007975	chr22:30003894-30007975	0	+	30003894	30003894	8553170	3	127,206,75,	0,3219,4006,
#Deleted in new
chr22	30007048	30007113	chr22:30007048-30007113	3	+	30007048	30007048	5263520	1	65,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	30008741	30080230	chr22:30008741-30080230	3	-	30008741	30008741	789624	5	455,113,102,129,103,	0,9875,31435,41719,71386,
#Partially deleted in new
chr22	30017682	30019651	chr22:30017682-30019651	0	+	30017682	30017682	8553170	2	390,172,	0,1797,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30018631	30080480	chr22:30018631-30080480	0	-	30018631	30018631	8553170	3	98,129,353,	0,31829,61496,
#Partially deleted in new
chr22	30022462	30025963	chr22:30022462-30025963	0	+	30022462	30022462	8553170	2	235,334,	0,3167,
#Deleted in new
chr22	30046275	30047193	chr22:30046275-30047193	7	-	30046275	30046275	16724991	1	918,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30047624	30080438	chr22:30047624-30080438	1	-	30047624	30047624	8553170	3	287,129,311,	0,2836,32503,
#Partially deleted in new
chr22	30080173	30177075	chr22:30080173-30177075	3	+	30093952	30176167	789624	11	318,88,142,64,37,21,27,68,158,251,1013,	0,13742,18678,23263,24227,31622,32322,38806,41458,41790,95889,
#Partially deleted in new
chr22	30080471	30122033	chr22:30080471-30122033	0	+	30093952	30111814	789624	9	20,88,142,64,21,27,68,158,70,	0,13444,18380,22965,31324,32024,38508,41160,41492,
#Partially deleted in new
chr22	30081010	30177073	chr22:30081010-30177073	1	+	30093952	30176167	789624	11	248,88,142,64,37,21,27,68,158,251,1011,	0,12905,17841,22426,23390,30785,31485,37969,40621,40953,95052,
#Partially deleted in new
chr22	30093957	30104577	chr22:30093957-30104577	0	+	30093957	30093957	8553170	4	46,142,64,177,	0,4894,9479,10443,
#Deleted in new
chr22	30105093	30105408	chr22:30105093-30105408	7	-	30105093	30105093	16724991	1	315,	0,
#Partially deleted in new
chr22	30136672	30137681	chr22:30136672-30137681	7	-	30136672	30136672	16724991	2	714,75,	0,934,
#Partially deleted in new
chr22	30184643	30207109	chr22:30184643-30207109	3	-	30184643	30184643	8553170	3	138,98,62,	0,7489,22404,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30239193	30240538	chr22:30239193-30240538	3	+	30239193	30239193	789624	3	85,131,592,	0,497,753,
#Deleted in new
chr22	30240446	30246851	chr22:30240446-30246851	3	-	30243650	30246695	0	3	3615,179,175,	0,4308,6230,
#Deleted in new
chr22	30243532	30246739	chr22:30243532-30246739	1	-	30243813	30246695	0	2	529,63,	0,3144,
#Deleted in new
chr22	30246204	30246998	chr22:30246204-30246998	3	+	30246204	30246204	789624	1	794,	0,
#Partially deleted in new
chr22	30262828	30266840	chr22:30262828-30266840	3	-	30263882	30266799	0	3	1636,143,75,	0,2173,3937,
#Partially deleted in new
chr22	30263867	30265818	chr22:30263867-30265818	1	-	30263882	30265115	789624	3	597,143,260,	0,1134,1691,
#Partially deleted in new
chr22	30264074	30266839	chr22:30264074-30266839	1	-	30264435	30266799	789624	2	390,74,	0,2691,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	30275214	30276951	chr22:30275214-30276951	3	-	30275214	30275214	8553170	1	1737,	0,
#Partially deleted in new
chr22	30285116	30289627	chr22:30285116-30289627	3	-	30285619	30289497	0	9	572,95,83,114,124,133,188,71,243,	0,715,899,1146,1708,2038,2256,3589,4268,
#Deleted in new
chr22	30285116	30287390	chr22:30285116-30287390	0	-	30285116	30285116	8553170	3	318,66,18,	0,2105,2256,
#Partially deleted in new
chr22	30285145	30289607	chr22:30285145-30289607	1	-	30285619	30289497	789624	8	543,95,83,124,133,188,71,223,	0,686,870,1679,2009,2227,3560,4239,
#Partially deleted in new
chr22	30285237	30295843	chr22:30285237-30295843	0	-	30288756	30295843	789624	14	451,95,83,114,127,133,188,71,79,155,190,66,115,107,	0,594,778,1025,1587,1917,2135,3468,7535,8413,8683,9558,9703,10499,
#Partially deleted in new
chr22	30285237	30299476	chr22:30285237-30299476	0	-	30288743	30299476	789624	13	451,95,83,124,133,188,71,155,190,66,115,107,33,	0,594,778,1587,1917,2135,3468,8413,8683,9558,9703,10499,14206,
#Partially deleted in new
chr22	30285244	30299482	chr22:30285244-30299482	2	-	30285619	30299482	789624	13	444,95,83,124,133,188,79,155,190,66,115,107,39,	0,587,771,1580,1910,2128,7528,8406,8676,9551,9696,10492,14199,
#Partially deleted in new
chr22	30285246	30299482	chr22:30285246-30299482	0	-	30287530	30299482	789624	12	442,95,127,124,133,188,155,190,66,115,107,39,	0,585,769,1578,1908,2126,8404,8674,9549,9694,10490,14197,
#Partially deleted in new
chr22	30285246	30299482	chr22:30285246-30299482	1	-	30287530	30299482	789624	13	442,95,83,114,124,133,188,155,190,66,115,107,39,	0,585,769,1016,1578,1908,2126,8404,8674,9549,9694,10490,14197,
#Partially deleted in new
chr22	30285496	30289569	chr22:30285496-30289569	0	-	30287544	30289497	789624	5	192,95,133,188,185,	0,335,1658,1876,3888,
#Partially deleted in new
chr22	30285831	30289622	chr22:30285831-30289622	0	-	30287544	30289497	789624	7	95,83,114,124,133,188,238,	0,184,431,993,1323,1541,3553,
#Partially deleted in new
chr22	30286273	30289531	chr22:30286273-30289531	0	-	30286273	30286273	8553170	4	675,133,188,147,	0,881,1099,3111,
#Partially deleted in new
chr22	30286346	30289540	chr22:30286346-30289540	0	-	30289308	30289497	789624	6	30,124,133,188,71,248,	0,478,808,1026,2359,2946,
#Partially deleted in new
chr22	30286541	30289531	chr22:30286541-30289531	0	-	30286541	30286541	8553170	5	410,133,188,71,147,	0,613,831,2164,2843,
#Partially deleted in new
chr22	30286671	30289546	chr22:30286671-30289546	0	-	30286671	30286671	8553170	3	616,188,162,	0,701,2713,
#Partially deleted in new
chr22	30287084	30289179	chr22:30287084-30289179	0	-	30287084	30287084	8553170	3	476,71,157,	0,1621,1938,
#Partially deleted in new
chr22	30287166	30289496	chr22:30287166-30289496	0	-	30289308	30289496	789624	4	121,188,71,200,	0,206,1539,2130,
#Partially deleted in new
chr22	30287197	30287950	chr22:30287197-30287950	0	-	30287197	30287197	8553170	3	90,188,62,	0,175,691,
#Partially deleted in new
chr22	30287438	30289546	chr22:30287438-30289546	0	-	30287438	30287438	8553170	2	122,250,	0,1858,
#Partially deleted in new
chr22	30291989	30327046	chr22:30291989-30327046	3	-	30292374	30326881	789624	9	862,155,190,66,115,107,108,100,374,	0,1661,1931,2806,2951,3747,7454,12541,34683,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	30291990	30299796	chr22:30291990-30299796	0	-	30291990	30291990	8553170	5	861,460,66,115,4060,	0,1660,2805,2950,3746,
#Deleted in new
chr22	30291990	30297480	chr22:30291990-30297480	0	-	30291990	30291990	8553170	6	861,155,190,66,115,1744,	0,1660,1930,2805,2950,3746,
#Partially deleted in new
chr22	30291992	30326901	chr22:30291992-30326901	1	-	30292374	30326881	789624	9	859,155,190,66,115,107,108,121,229,	0,1658,1928,2803,2948,3744,7451,12538,34680,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	30292007	30307890	chr22:30292007-30307890	1	-	30292374	30304575	789624	9	844,155,190,66,115,107,108,100,148,	0,1643,1913,2788,2933,3729,7436,12523,15735,
#Partially deleted in new
chr22	30292009	30318835	chr22:30292009-30318835	0	-	30293277	30318666	789624	10	842,161,155,190,66,115,107,108,100,177,	0,1149,1641,1911,2786,2931,3727,7434,12521,26649,
#Deleted in new
chr22	30293398	30294849	chr22:30293398-30294849	0	-	30293398	30293398	8553170	3	407,190,54,	0,522,1397,
#Partially deleted in new
chr22	30293920	30326947	chr22:30293920-30326947	0	-	30299472	30326881	789624	6	190,66,115,107,108,275,	0,875,1020,1816,5523,32752,
#Partially deleted in new
chr22	30294088	30305631	chr22:30294088-30305631	0	-	30294088	30304575	789624	7	22,66,115,107,108,100,60,	0,707,852,1648,5355,10442,11483,
#Partially deleted in new
chr22	30300470	30326901	chr22:30300470-30326901	0	-	30300470	30300470	8553170	3	191,100,229,	0,4060,26202,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr22	30331987	30356947	chr22:30331987-30356947	3	-	30334593	30356792	0	16	2708,72,102,155,208,246,122,186,118,194,151,75,258,208,122,218,	0,3479,3664,5038,5702,6801,7142,8208,8707,9704,10212,10817,12945,14324,20963,24742,
#Partially deleted in new
chr22	30337800	30356884	chr22:30337800-30356884	0	-	30339030	30356792	789624	4	97,246,50,155,	0,988,1329,18929,
#Partially deleted in new
chr22	30337816	30341850	chr22:30337816-30341850	0	-	30337816	30341850	789624	5	81,246,173,118,159,	0,972,2392,2878,3875,
#Partially deleted in new
chr22	30338839	30340471	chr22:30338839-30340471	0	-	30338839	30338839	8553170	3	195,122,276,	0,290,1356,
#Partially deleted in new
chr22	30338960	30340779	chr22:30338960-30340779	0	-	30338960	30338960	8553170	2	291,584,	0,1235,
#Partially deleted in new
chr22	30342319	30356919	chr22:30342319-30356919	0	-	30342872	30356792	789624	4	31,75,122,190,	0,485,10631,14410,
#Deleted in new
chr22	30342546	30345154	chr22:30342546-30345154	0	-	30342546	30342546	8553170	2	333,222,	0,2386,
#Deleted in new
chr22	30344909	30346489	chr22:30344909-30346489	0	-	30344909	30344909	8553170	2	281,178,	0,1402,
#Partially deleted in new
chr22	30346220	30356891	chr22:30346220-30356891	0	-	30346220	30346220	8553170	3	299,122,162,	0,6730,10509,
#Partially deleted in new
chr22	30352544	30356894	chr22:30352544-30356894	0	-	30352544	30352544	8553170	2	528,165,	0,4185,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30356634	30367096	chr22:30356634-30367096	1	+	30366000	30366252	789624	3	498,154,1107,	0,5326,9355,
#Partially deleted in new
chr22	30356634	30376829	chr22:30356634-30376829	3	+	30366000	30376745	789624	12	498,154,305,172,625,78,212,168,169,185,89,397,	0,5326,9309,12797,13691,15015,15440,16962,17288,18844,19624,19798,
#Partially deleted in new
chr22	30356637	30376827	chr22:30356637-30376827	1	+	30366000	30376745	789624	12	495,154,259,172,625,78,212,168,169,185,89,395,	0,5323,9352,12794,13688,15012,15437,16959,17285,18841,19621,19795,
#Partially deleted in new
chr22	30357000	30370494	chr22:30357000-30370494	0	+	30366000	30370494	789624	4	132,259,172,169,	0,8989,12431,13325,
#Partially deleted in new
chr22	30357006	30370508	chr22:30357006-30370508	0	+	30366000	30370508	789624	5	126,154,259,172,183,	0,4954,8983,12425,13319,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	30357113	30378658	chr22:30357113-30378658	0	+	30357113	30357113	8553170	10	19,154,172,1402,212,168,169,178,89,2226,	0,4847,12318,13212,14961,16483,16809,18372,19145,19319,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30368810	30379780	chr22:30368810-30379780	0	-	30379603	30379780	789624	3	7210,632,299,	0,8700,10671,
#Partially deleted in new
chr22	30373691	30376827	chr22:30373691-30376827	0	+	30373691	30373691	8553170	3	400,89,395,	0,2567,2741,
#Deleted in new
chr22	30374323	30374878	chr22:30374323-30374878	1	-	30374386	30374794	789624	1	555,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30377819	30379780	chr22:30377819-30379780	0	-	30379599	30379780	789624	3	323,141,70,	0,1662,1891,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30377819	30379780	chr22:30377819-30379780	0	-	30379599	30379780	789624	3	323,75,70,	0,1728,1891,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	30377845	30379774	chr22:30377845-30379774	0	-	30378101	30379774	789624	2	297,64,	0,1865,
#Partially deleted in new
chr22	30378816	30387388	chr22:30378816-30387388	3	-	30379599	30387313	789624	9	806,103,144,120,157,86,72,144,360,	0,894,1245,1465,5522,7087,7253,7799,8212,
#Partially deleted in new
chr22	30378982	30387125	chr22:30378982-30387125	0	-	30379603	30387125	789624	8	831,144,120,157,86,72,144,97,	0,1079,1299,5356,6921,7087,7633,8046,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	30379589	30384834	chr22:30379589-30384834	0	-	30379589	30379589	8553170	5	33,103,144,120,496,	0,121,472,692,4749,
#Partially deleted in new
chr22	30384369	30386886	chr22:30384369-30386886	0	-	30384369	30384369	8553170	4	126,86,72,271,	0,1534,1700,2246,
#Partially deleted in new
chr22	30396856	30425317	chr22:30396856-30425317	3	+	30397116	30422407	0	12	314,76,44,60,189,96,61,84,107,140,170,3041,	0,2786,9485,10238,10558,12330,12569,13739,18902,19091,19377,25420,
#Partially deleted in new
chr22	30396940	30415865	chr22:30396940-30415865	0	+	30406373	30415865	789624	8	230,44,60,189,96,61,84,107,	0,9401,10154,10474,12246,12485,13655,18818,
#Partially deleted in new
chr22	30396991	30423838	chr22:30396991-30423838	1	+	30406373	30422407	789624	10	179,44,189,96,61,84,107,140,170,1562,	0,9350,10423,12195,12434,13604,18767,18956,19242,25285,
#Partially deleted in new
chr22	30396994	30423840	chr22:30396994-30423840	0	+	30396994	30396994	8553170	11	176,76,44,60,80,96,61,84,329,170,1564,	0,2648,9347,10100,10529,12192,12431,13601,18764,19239,25282,
#Partially deleted in new
chr22	30397017	30409136	chr22:30397017-30409136	0	+	30397017	30397017	8553170	6	153,76,44,60,189,30,	0,2625,9324,10077,10397,12089,
#Partially deleted in new
chr22	30397017	30409249	chr22:30397017-30409249	0	+	30397116	30407544	789624	6	153,76,44,60,80,143,	0,2625,9324,10077,10506,12089,
#Partially deleted in new
chr22	30397017	30409477	chr22:30397017-30409477	0	+	30397116	30407418	789624	6	153,44,60,189,176,52,	0,9324,10077,10397,12089,12408,
#Partially deleted in new
chr22	30397036	30416975	chr22:30397036-30416975	1	+	30397116	30416501	0	11	134,76,44,60,189,96,61,84,107,140,742,	0,2606,9305,10058,10378,12150,12389,13559,18722,18911,19197,
#Partially deleted in new
chr22	30397044	30422601	chr22:30397044-30422601	1	+	30397116	30422407	0	10	126,76,44,96,61,84,107,140,170,325,	0,2598,9297,12142,12381,13551,18714,18903,19189,25232,
#Partially deleted in new
chr22	30397050	30409282	chr22:30397050-30409282	0	+	30397050	30397050	8553170	7	120,122,76,44,60,189,96,	0,698,2592,9291,10044,10364,12136,
#Partially deleted in new
chr22	30397537	30407542	chr22:30397537-30407542	0	+	30397848	30407542	789624	4	333,44,60,128,	0,8804,9557,9877,
#Partially deleted in new
chr22	30398576	30407477	chr22:30398576-30407477	0	+	30398686	30407477	789624	5	242,76,44,60,63,	0,1066,7765,8518,8838,
#Partially deleted in new
chr22	30399683	30416673	chr22:30399683-30416673	0	+	30399683	30399683	8553170	9	35,44,60,189,96,61,84,140,440,	0,6658,7411,7731,9503,9742,10912,16264,16550,
#Deleted in new
chr22	30399683	30400467	chr22:30399683-30400467	0	+	30399683	30399683	8553170	2	35,131,	0,653,
#Deleted in new
chr22	30399683	30400467	chr22:30399683-30400467	0	+	30399683	30399683	8553170	2	35,209,	0,575,
#Partially deleted in new
chr22	30409021	30416007	chr22:30409021-30416007	0	+	30409021	30409021	8553170	5	261,61,84,107,60,	0,404,1574,6737,6926,
#Partially deleted in new
chr22	30409114	30423838	chr22:30409114-30423838	0	+	30409114	30409114	8553170	6	168,61,84,140,170,1562,	0,311,1481,6833,7119,13162,
#Partially deleted in new
chr22	30409254	30428990	chr22:30409254-30428990	0	+	30409254	30416283	789624	5	28,61,84,170,529,	0,171,1341,6979,19207,
#Partially deleted in new
chr22	30409261	30428987	chr22:30409261-30428987	3	+	30409261	30428534	789624	9	21,61,84,107,140,170,128,233,526,	0,164,1334,6497,6686,6972,17455,17909,19200,
#Partially deleted in new
chr22	30409262	30428990	chr22:30409262-30428990	0	+	30409262	30428730	789624	4	20,61,84,529,	0,163,1333,19199,
#Deleted in new
chr22	30420511	30420912	chr22:30420511-30420912	3	+	30420511	30420511	8553170	1	401,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	30421044	30421148	chr22:30421044-30421148	3	+	30421044	30421044	8553170	1	104,	0,
#Deleted in new
chr22	30421205	30421536	chr22:30421205-30421536	3	-	30421205	30421205	8553170	1	331,	0,
#Partially deleted in new
chr22	30425529	30429053	chr22:30425529-30429053	3	+	30425879	30428534	789624	4	417,128,233,592,	0,1187,1641,2932,
#Partially deleted in new
chr22	30425622	30427151	chr22:30425622-30427151	1	+	30425879	30427151	789624	3	324,128,30,	0,1094,1499,
#Partially deleted in new
chr22	30425774	30427192	chr22:30425774-30427192	0	+	30425774	30425774	8553170	2	172,476,	0,942,
#Partially deleted in new
chr22	30425775	30429053	chr22:30425775-30429053	1	+	30425879	30428674	789624	3	171,128,592,	0,941,2686,
#Partially deleted in new
chr22	30425779	30428643	chr22:30425779-30428643	0	+	30425879	30427151	789624	4	167,128,282,182,	0,937,1342,2682,
#Partially deleted in new
chr22	30425816	30428951	chr22:30425816-30428951	1	+	30425879	30428534	789624	4	130,128,164,490,	0,900,1423,2645,
#Deleted in new
chr22	30435543	30436244	chr22:30435543-30436244	7	+	30435543	30435543	16724991	2	370,326,	0,375,
#Deleted in new
chr22	30435543	30436247	chr22:30435543-30436247	0	+	30435543	30435543	8553170	1	704,	0,
#Partially deleted in new
chr22	30439836	30440318	chr22:30439836-30440318	7	+	30439836	30439836	16724991	1	482,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	30447958	30472017	chr22:30447958-30472017	1	-	30449086	30470075	789624	13	1286,170,140,107,84,61,96,189,60,44,76,48,113,	0,13351,13596,14127,16861,18375,19023,20549,22060,22253,22548,23201,23946,
#Partially deleted in new
chr22	30459228	30472049	chr22:30459228-30472049	3	-	30460020	30471958	0	12	914,170,140,107,84,61,96,189,60,44,76,145,	0,2081,2326,2857,5591,7105,7753,9279,10790,10983,11278,12676,
#Partially deleted in new
chr22	30459229	30470585	chr22:30459229-30470585	1	-	30460020	30468791	0	12	913,170,140,107,84,61,96,189,170,60,44,79,	0,2080,2325,2856,5590,7104,7752,9278,9559,10789,10982,11277,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	30459505	30471986	chr22:30459505-30471986	1	-	30460020	30470075	0	13	637,170,140,107,84,61,96,189,60,44,76,48,82,	0,1804,2049,2580,5314,6828,7476,9002,10513,10706,11001,11654,12399,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr22	30459505	30471986	chr22:30459505-30471986	1	-	30460020	30468791	0	14	637,170,140,107,84,61,96,189,170,60,44,76,48,82,	0,1804,2049,2580,5314,6828,7476,9002,9283,10513,10706,11001,11654,12399,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	30459505	30471986	chr22:30459505-30471986	0	-	30471175	30471958	789624	13	637,170,140,107,84,61,96,189,60,44,76,118,82,	0,1804,2049,2580,5314,6828,7476,9002,10513,10706,11001,11654,12399,
#Partially deleted in new
chr22	30461669	30470577	chr22:30461669-30470577	0	-	30461669	30470577	789624	8	25,107,84,61,96,189,60,71,	0,416,3150,4664,5312,6838,8349,8837,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	30475363	30492616	chr22:30475363-30492616	3	+	30475363	30475363	8553170	7	45,367,128,62,169,60,174,	0,3266,7764,8414,16060,16514,17079,
#Partially deleted in new
chr22	30481310	30481911	chr22:30481310-30481911	7	-	30481310	30481310	16724991	1	601,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30483138	30486366	chr22:30483138-30486366	0	+	30483138	30483138	8553170	3	117,62,620,	0,639,2608,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30483353	30492768	chr22:30483353-30492768	0	+	30483353	30483353	8553170	3	486,60,330,	0,8524,9085,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30483412	30492788	chr22:30483412-30492788	1	+	30483412	30483412	8553170	3	427,241,350,	0,8284,9026,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	30488912	30505695	chr22:30488912-30505695	3	-	30490106	30505611	0	12	1334,170,140,107,84,61,96,189,60,44,76,138,	0,2660,2921,3136,3561,5237,5953,6341,6670,7015,14764,16645,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	30488912	30505711	chr22:30488912-30505711	0	-	30503705	30505611	789624	12	1378,170,140,107,84,61,96,189,60,44,92,154,	0,2660,2921,3136,3561,5237,5953,6341,6670,7015,14764,16645,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	30488912	30505711	chr22:30488912-30505711	0	-	30495583	30505611	789624	13	1334,170,140,107,84,61,96,189,60,49,44,76,154,	0,2660,2921,3136,3561,5237,5953,6341,6670,6829,7015,14764,16645,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	30489395	30505650	chr22:30489395-30505650	1	-	30489876	30505611	0	12	483,170,140,107,84,61,96,189,60,44,76,93,	0,2177,2438,2653,3078,4754,5470,5858,6187,6532,14281,16162,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	30491801	30492804	chr22:30491801-30492804	0	+	30491801	30491801	8553170	2	136,366,	0,637,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	30522798	30546682	chr22:30522798-30546682	3	-	30524996	30546682	789624	12	2311,170,140,107,84,61,96,189,60,44,76,54,	0,2551,2812,3027,6288,6490,9104,9726,9998,11197,16028,23830,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	30524645	30529163	chr22:30524645-30529163	0	-	30525066	30529163	789624	4	464,140,107,77,	0,965,1180,4441,
#Deleted in new
chr22	30542535	30544305	chr22:30542535-30544305	7	+	30542535	30542535	16724991	1	1770,	0,
#Partially deleted in new
chr22	30554634	30565133	chr22:30554634-30565133	1	-	30554952	30557392	789624	3	1459,140,309,	0,2627,10190,
#Partially deleted in new
chr22	30554634	30574578	chr22:30554634-30574578	3	-	30554952	30557392	789624	3	1459,140,113,	0,2627,19831,
#Partially deleted in new
chr22	30554634	30560776	chr22:30554634-30560776	1	-	30554952	30557392	789624	3	1459,140,36,	0,2627,6106,
#Partially deleted in new
chr22	30554636	30557586	chr22:30554636-30557586	1	-	30554952	30557392	789624	2	1457,325,	0,2625,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	30554636	30564889	chr22:30554636-30564889	1	-	30554952	30557392	789624	4	1457,140,129,65,	0,2625,3623,10188,
#Partially deleted in new
chr22	30555387	30566161	chr22:30555387-30566161	0	-	30555387	30557392	789624	3	706,140,48,	0,1874,10726,
#Partially deleted in new
chr22	30555431	30574511	chr22:30555431-30574511	0	-	30555431	30557392	789624	3	665,140,46,	0,1830,19034,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	30555626	30560759	chr22:30555626-30560759	0	-	30555626	30557392	789624	4	467,140,129,19,	0,1635,2633,5114,
#Partially deleted in new
chr22	30555713	30572864	chr22:30555713-30572864	0	-	30555713	30557392	789624	3	380,140,62,	0,1548,17089,
#Partially deleted in new
chr22	30555736	30560773	chr22:30555736-30560773	0	-	30555736	30557392	789624	3	360,140,33,	0,1525,5004,
#Partially deleted in new
chr22	30555793	30572830	chr22:30555793-30572830	0	-	30555793	30557392	789624	3	300,140,144,	0,1468,16893,
#Partially deleted in new
chr22	30555923	30557730	chr22:30555923-30557730	0	-	30555923	30557392	789624	2	170,469,	0,1338,
#Partially deleted in new
chr22	30555969	30572869	chr22:30555969-30572869	0	-	30555969	30557392	789624	4	124,140,125,183,	0,1292,9107,16717,
#Partially deleted in new
chr22	30576624	30591940	chr22:30576624-30591940	3	-	30577045	30591833	0	15	505,162,167,185,126,131,90,75,117,90,172,110,154,80,131,	0,2212,2512,3126,3428,3946,4387,4709,4903,7740,7921,10661,11396,12566,15185,
#Partially deleted in new
chr22	30576627	30607083	chr22:30576627-30607083	1	-	30577045	30584668	789624	17	502,162,167,185,126,131,90,75,117,90,172,110,154,80,267,57,275,	0,2209,2509,3123,3425,3943,4384,4706,4900,7737,7918,10658,11393,12563,15504,28833,30181,
#Partially deleted in new
chr22	30576629	30579923	chr22:30576629-30579923	0	-	30577045	30579923	789624	4	500,159,167,173,	0,2207,2507,3121,
#Partially deleted in new
chr22	30576631	30606988	chr22:30576631-30606988	1	-	30577045	30584668	789624	17	498,162,167,185,126,131,90,75,117,90,172,110,154,80,267,104,180,	0,2205,2505,3119,3421,3939,4380,4702,4896,7733,7914,10654,11389,12559,15500,28782,30177,
#Partially deleted in new
chr22	30576635	30580074	chr22:30576635-30580074	0	-	30576635	30576635	8553170	2	494,1238,	0,2201,
#Partially deleted in new
chr22	30576664	30591880	chr22:30576664-30591880	1	-	30577045	30591833	789624	15	465,162,167,185,126,131,90,75,117,39,172,110,154,80,71,	0,2172,2472,3086,3388,3906,4347,4669,4863,7751,7881,10621,11356,12526,15145,
#Partially deleted in new
chr22	30576834	30591858	chr22:30576834-30591858	1	-	30577045	30591833	0	15	295,162,167,185,126,116,90,75,117,90,172,110,154,80,49,	0,2002,2302,2916,3218,3736,4177,4499,4693,7530,7711,10451,11186,12356,14975,
#Partially deleted in new
chr22	30581333	30591866	chr22:30581333-30591866	0	-	30581333	30584668	789624	8	75,117,90,172,110,154,80,73,	0,194,3031,3212,5952,6687,7857,10460,
#Partially deleted in new
chr22	30584226	30588023	chr22:30584226-30588023	0	-	30584226	30584226	8553170	4	228,172,110,3,	0,319,3059,3794,
#Partially deleted in new
chr22	30585223	30591878	chr22:30585223-30591878	0	-	30585223	30585223	8553170	5	147,110,154,80,69,	0,2062,2797,3967,6586,
#Partially deleted in new
chr22	30586997	30591890	chr22:30586997-30591890	0	-	30586997	30586997	8553170	4	398,154,80,81,	0,1023,2193,4812,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30598308	30606687	chr22:30598308-30606687	3	+	30598308	30598308	8553170	3	55,98,96,	0,3509,8283,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30603777	30606869	chr22:30603777-30606869	0	-	30603777	30603777	8553170	3	325,104,61,	0,1636,3031,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30603779	30607058	chr22:30603779-30607058	0	-	30603779	30603779	8553170	3	323,57,250,	0,1681,3029,
#Partially deleted in new
chr22	30606837	30627278	chr22:30606837-30627278	3	+	30607331	30626521	0	9	558,193,170,153,173,187,166,116,819,	0,4033,6035,7511,8463,8763,10492,16130,19622,
#Partially deleted in new
chr22	30607002	30611114	chr22:30607002-30611114	0	+	30607002	30607002	8553170	2	393,244,	0,3868,
#Partially deleted in new
chr22	30607082	30627046	chr22:30607082-30627046	1	+	30610881	30626521	789624	10	313,101,193,170,153,173,187,166,116,587,	0,3152,3788,5790,7266,8218,8518,10247,15885,19377,
#Partially deleted in new
chr22	30607151	30627005	chr22:30607151-30627005	1	+	30607331	30626521	789624	9	244,193,158,153,173,187,166,116,546,	0,3719,5733,7197,8149,8449,10178,15816,19308,
#Partially deleted in new
chr22	30607203	30627060	chr22:30607203-30627060	1	+	30607331	30626521	0	9	192,193,89,153,173,187,166,116,601,	0,3667,5669,7145,8097,8397,10126,15764,19256,
#Partially deleted in new
chr22	30615691	30617717	chr22:30615691-30617717	0	+	30615691	30615691	8553170	2	96,388,	0,1638,
#Partially deleted in new
chr22	30615715	30623296	chr22:30615715-30623296	0	+	30615715	30615715	8553170	3	72,166,329,	0,1614,7252,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	30635651	30647893	chr22:30635651-30647893	3	+	30636450	30647031	789624	2	1418,1296,	0,10946,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30636322	30663299	chr22:30636322-30663299	1	+	30636450	30649245	789624	3	747,94,1240,	0,12837,25737,
#Partially deleted in new
chr22	30636522	30669016	chr22:30636522-30669016	0	+	30636522	30665557	789624	3	547,67,1416,	0,28970,31078,
#Partially deleted in new
chr22	30653876	30654814	chr22:30653876-30654814	7	-	30653876	30653876	16724991	2	95,517,	0,421,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30654145	30667809	chr22:30654145-30667809	0	-	30663436	30664003	0	3	316,1068,348,	0,8867,13316,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	30654183	30663457	chr22:30654183-30663457	0	-	30663436	30663457	8553170	2	254,445,	0,8829,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30661444	30667855	chr22:30661444-30667855	1	-	30663539	30664003	789624	3	2284,242,394,	0,2394,6017,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	30662030	30667890	chr22:30662030-30667890	1	-	30663436	30664003	0	2	2050,429,	0,5431,
#Partially deleted in new
chr22	30663514	30667885	chr22:30663514-30667885	0	-	30663514	30664003	789624	3	566,167,424,	0,1440,3947,
#Partially deleted in new
chr22	30663970	30667353	chr22:30663970-30667353	0	-	30663970	30664003	789624	2	110,547,	0,2836,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr22	30693781	30906554	chr22:30693781-30906554	1	+	30694060	30906339	789624	15	291,137,209,254,193,118,55,147,246,121,104,96,185,233,358,	0,426,47379,176647,193644,194441,195398,195708,196946,199340,199681,199856,200035,212055,212415,
#Partially deleted in new
chr22	30694075	30907632	chr22:30694075-30907632	1	+	30694219	30906339	789624	14	269,209,254,193,118,58,147,246,121,104,96,185,233,1436,	0,47085,176353,193350,194147,195101,195414,196652,199046,199387,199562,199741,211761,212121,
#Partially deleted in new
chr22	30694205	30907824	chr22:30694205-30907824	1	+	30741353	30906339	789624	14	139,209,254,197,114,55,147,246,121,104,96,185,233,1628,	0,46955,176223,193220,194021,194974,195284,196522,198916,199257,199432,199611,211631,211991,
#Partially deleted in new
chr22	30694805	30907824	chr22:30694805-30907824	3	+	30694909	30906339	789624	14	748,209,254,193,118,58,147,246,121,104,96,185,233,1628,	0,46355,175623,192620,193417,194371,194684,195922,198316,198657,198832,199011,211031,211391,
#Partially deleted in new
chr22	30694888	30906406	chr22:30694888-30906406	1	+	30694909	30906339	789624	14	665,209,254,193,118,55,147,246,121,104,96,185,233,210,	0,46272,175540,192537,193334,194291,194601,195839,198233,198574,198749,198928,210948,211308,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	30731556	30731641	chr22:30731556-30731641	3	+	30731556	30731556	5263520	1	85,	0,
#Partially deleted in new
chr22	30764252	30906772	chr22:30764252-30906772	1	+	30870673	30906339	789624	13	140,254,193,118,55,147,246,121,104,96,185,233,576,	0,106176,123173,123970,124927,125237,126475,128869,129210,129385,129564,141584,141944,
#Partially deleted in new
chr22	30764252	30887491	chr22:30764252-30887491	0	+	30870673	30887491	789624	4	140,99,254,66,	0,6330,106176,123173,
#Partially deleted in new
chr22	30770659	30872523	chr22:30770659-30872523	0	+	30770659	30770659	8553170	3	22,254,215,	0,99769,101649,
#Partially deleted in new
chr22	30803085	30889635	chr22:30803085-30889635	0	+	30870673	30889635	789624	6	92,254,193,118,58,146,	0,67343,84340,85137,86091,86404,
#Partially deleted in new
chr22	30822515	30907824	chr22:30822515-30907824	1	+	30822630	30906339	789624	13	194,254,193,118,58,147,246,121,104,96,185,233,1631,	0,47913,64910,65707,66661,66974,68212,70606,70947,71122,71301,83321,83678,
#Partially deleted in new
chr22	30881680	30907623	chr22:30881680-30907623	0	+	30881680	30906339	789624	12	122,193,118,58,147,246,121,104,96,185,233,1427,	0,5745,6542,7496,7809,9047,11441,11782,11957,12136,24156,24516,
#Partially deleted in new
chr22	30881680	30893135	chr22:30881680-30893135	0	+	30881680	30893135	789624	7	122,193,118,55,147,246,14,	0,5745,6542,7499,7809,9047,11441,
#Partially deleted in new
chr22	30881680	30889617	chr22:30881680-30889617	0	+	30881680	30889617	789624	5	122,193,118,58,98,	0,5745,6542,7496,7839,
#Partially deleted in new
chr22	30881680	30907824	chr22:30881680-30907824	1	+	30888287	30906339	789624	12	122,193,118,55,147,246,121,104,96,185,233,1628,	0,5745,6542,7499,7809,9047,11441,11782,11957,12136,24156,24516,
#Partially deleted in new
chr22	30887425	30907643	chr22:30887425-30907643	0	+	30887425	30906233	789624	10	193,118,58,147,246,121,104,96,233,1447,	0,797,1751,2064,3302,5696,6037,6212,18411,18771,
#Deleted in new
chr22	30890948	30894261	chr22:30890948-30894261	0	+	30890948	30890948	8553170	3	25,104,624,	0,2514,2689,
#Deleted in new
chr22	30893462	30894463	chr22:30893462-30894463	0	+	30893462	30893757	789624	2	104,826,	0,175,
#Partially deleted in new
chr22	30902218	30902781	chr22:30902218-30902781	7	+	30902218	30902218	16724991	1	563,	0,
#Partially deleted in new
chr22	30922307	30926550	chr22:30922307-30926550	0	+	30922307	30922307	789624	2	208,1822,	0,2421,
#Partially deleted in new
chr22	30922344	30926654	chr22:30922344-30926654	3	+	30922344	30922344	8553170	3	171,177,1926,	0,901,2384,
#Partially deleted in new
chr22	30922409	30925192	chr22:30922409-30925192	0	+	30922409	30922409	8553170	2	106,490,	0,2293,
#Partially deleted in new
chr22	30925129	30968298	chr22:30925129-30968298	3	-	30926802	30967889	0	26	1742,189,94,225,142,55,132,381,75,133,106,129,155,141,86,83,80,126,112,160,109,91,69,35,54,477,	0,2889,7229,7415,7759,8336,8930,9651,10118,11381,11802,12453,12685,12935,14491,14829,15628,16303,16761,16982,21211,24622,25247,31633,33511,42692,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr22	30926610	30968201	chr22:30926610-30968201	1	-	30926802	30950416	0	27	261,189,94,225,142,55,132,381,75,133,106,129,155,141,86,83,80,126,112,160,109,91,69,35,54,110,1136,	0,1408,5748,5934,6278,6855,7449,8170,8637,9900,10321,10972,11204,11454,13010,13348,14147,14822,15280,15501,19730,23141,23766,30152,32030,36614,40455,
#Deleted in new
chr22	30926610	30928228	chr22:30926610-30928228	0	-	30926802	30928228	789624	2	261,201,	0,1417,
#Partially deleted in new
chr22	30926610	30932894	chr22:30926610-30932894	0	-	30926802	30932894	789624	5	261,180,94,225,6,	0,1417,5748,5934,6278,
#Partially deleted in new
chr22	30936577	30942251	chr22:30936577-30942251	0	-	30936577	30936577	8553170	6	66,71,80,126,112,140,	0,354,4180,4855,5313,5534,
#Partially deleted in new
chr22	30941899	30958884	chr22:30941899-30958884	0	-	30941899	30941899	8553170	7	103,160,109,91,69,35,244,	0,212,4441,7852,8477,14863,16741,
#Partially deleted in new
chr22	30969244	30971483	chr22:30969244-30971483	0	+	30969244	30969244	8553170	2	142,233,	0,2006,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	30969268	30978843	chr22:30969268-30978843	0	+	30969268	30969268	8553170	4	118,125,733,3674,	0,2779,3586,5901,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30969269	30979395	chr22:30969269-30979395	1	+	30969269	30969269	789624	3	2510,733,4226,	0,3585,5900,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30969271	30978578	chr22:30969271-30978578	0	+	30969271	30969271	8553170	3	115,733,3366,	0,3583,5941,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30969277	30978831	chr22:30969277-30978831	0	+	30969277	30969277	8553170	3	109,678,3662,	0,3646,5892,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	30969294	30976022	chr22:30969294-30976022	0	+	30969294	30969294	8553170	4	92,125,747,853,	0,2753,3560,5875,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	30969471	30978848	chr22:30969471-30978848	0	+	30969471	30969471	8553170	4	62,529,747,3679,	0,1779,3383,5698,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30969852	30975997	chr22:30969852-30975997	0	+	30969852	30969852	8553170	3	1927,664,828,	0,3071,5317,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	30969931	30974103	chr22:30969931-30974103	0	+	30969931	30969931	8553170	2	1848,1180,	0,2992,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30969958	30978824	chr22:30969958-30978824	0	+	30969958	30969958	8553170	3	1821,678,3655,	0,2965,5211,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30970093	30976058	chr22:30970093-30976058	0	+	30970093	30970093	8553170	3	1686,733,889,	0,2761,5076,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	30970181	30978847	chr22:30970181-30978847	2	+	30970181	30970181	789624	2	3406,3678,	0,4988,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30970301	30978819	chr22:30970301-30978819	0	+	30970301	30970301	8553170	3	1478,747,3650,	0,2553,4868,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30970689	30978823	chr22:30970689-30978823	0	+	30970689	30970689	8553170	3	1080,678,3654,	0,2234,4480,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	30970757	30976039	chr22:30970757-30976039	0	+	30970757	30970757	8553170	2	1022,3185,	0,2097,
#Deleted in new
chr22	30971004	30971149	chr22:30971004-30971149	3	+	30971004	30971004	8553170	1	145,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	30971063	30976114	chr22:30971063-30976114	0	+	30971063	30971063	8553170	3	1109,733,945,	0,1791,4106,
#Deleted in new
chr22	30971196	30973372	chr22:30971196-30973372	0	+	30971196	30971196	8553170	2	414,518,	0,1658,
#Deleted in new
chr22	30971295	30971382	chr22:30971295-30971382	3	+	30971295	30971295	8553170	1	87,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	30971366	30976063	chr22:30971366-30976063	0	+	30971366	30971366	8553170	4	413,125,678,894,	0,681,1557,3803,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	30971438	30978722	chr22:30971438-30978722	0	+	30971438	30971438	8553170	4	341,125,733,3553,	0,609,1416,3731,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	30972262	30976063	chr22:30972262-30976063	0	+	30972262	30972262	8553170	2	1339,894,	0,2907,
#Deleted in new
chr22	30972856	30973093	chr22:30972856-30973093	3	+	30972856	30972856	8553170	1	237,	0,
#Deleted in new
chr22	30973416	30973597	chr22:30973416-30973597	3	+	30973416	30973416	8553170	1	181,	0,
#Deleted in new
chr22	30977515	30977858	chr22:30977515-30977858	3	-	30977515	30977515	8553170	2	222,42,	0,301,
#Duplicated in new
chr22	31051629	31068327	chr22:31051629-31068327	3	+	31051629	31051629	8553170	1	16698,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	31059988	31060285	chr22:31059988-31060285	3	+	31059988	31059988	8553170	1	297,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	31064104	31088025	chr22:31064104-31088025	0	+	31082920	31088025	789624	6	83,120,79,93,131,61,	0,16345,16571,18805,19074,23860,
#Partially deleted in new
chr22	31064117	31088024	chr22:31064117-31088024	0	+	31083258	31088024	789624	4	70,305,131,60,	0,16332,19061,23847,
#Partially deleted in new
chr22	31081317	31088574	chr22:31081317-31088574	0	+	31082920	31088574	789624	5	139,93,131,149,62,	0,1592,1861,6647,7195,
#Partially deleted in new
chr22	31081317	31088605	chr22:31081317-31088605	0	+	31082920	31088605	789624	5	139,87,131,149,93,	0,1598,1861,6647,7195,
#Partially deleted in new
chr22	31081317	31088724	chr22:31081317-31088724	0	+	31081317	31081317	8553170	5	139,131,149,153,26,	0,1861,6647,7136,7381,
#Partially deleted in new
chr22	31081317	31088591	chr22:31081317-31088591	0	+	31088576	31088591	8553170	4	139,131,181,138,	0,1861,6615,7136,
#Partially deleted in new
chr22	31081318	31104624	chr22:31081318-31104624	1	+	31083258	31101029	0	21	138,131,149,94,79,98,321,73,72,522,173,153,76,165,63,70,174,118,152,165,309,	0,1860,6646,7194,7380,7553,8380,8789,9489,9642,10356,13984,14215,15414,15679,15950,17348,17743,18426,19566,22997,
#Partially deleted in new
chr22	31081318	31104624	chr22:31081318-31104624	1	+	31083258	31104466	0	20	138,131,149,94,79,98,321,73,72,522,173,153,76,165,63,70,174,118,152,309,	0,1860,6646,7194,7380,7553,8380,8789,9489,9642,10356,13984,14215,15414,15679,15950,17348,17743,18426,22997,
#Partially deleted in new
chr22	31081318	31104623	chr22:31081318-31104623	3	+	31083258	31104466	0	21	138,131,149,94,79,98,321,73,72,522,173,153,76,165,63,70,174,118,152,69,308,	0,1860,6646,7194,7380,7553,8380,8789,9489,9642,10356,13984,14215,15414,15679,15950,17348,17743,18426,19566,22997,
#Partially deleted in new
chr22	31081318	31088253	chr22:31081318-31088253	0	+	31081318	31081318	8553170	3	138,131,289,	0,1860,6646,
#Partially deleted in new
chr22	31081319	31104623	chr22:31081319-31104623	0	+	31081319	31081319	8553170	20	137,131,149,153,79,98,321,73,72,522,173,153,76,165,341,174,118,152,165,308,	0,1859,6645,7134,7379,7552,8379,8788,9488,9641,10355,13983,14214,15413,15678,17347,17742,18425,19565,22996,
#Deleted in new
chr22	31082155	31083565	chr22:31082155-31083565	3	-	31082155	31082155	8553170	1	1410,	0,
#Partially deleted in new
chr22	31082484	31088880	chr22:31082484-31088880	0	+	31083258	31088880	789624	6	83,131,149,94,79,9,	0,694,5480,6028,6214,6387,
#Partially deleted in new
chr22	31082859	31104623	chr22:31082859-31104623	1	+	31082920	31104466	789624	21	143,131,149,94,79,98,321,73,72,522,173,93,153,76,165,63,70,174,118,152,308,	0,319,5105,5653,5839,6012,6839,7248,7948,8101,8815,10924,12443,12674,13873,14138,14409,15807,16202,16885,21456,
#Partially deleted in new
chr22	31084995	31104623	chr22:31084995-31104623	1	+	31085072	31101029	789624	20	296,149,94,79,98,321,73,72,522,173,153,76,165,63,70,174,118,152,165,308,	0,2969,3517,3703,3876,4703,5112,5812,5965,6679,10307,10538,11737,12002,12273,13671,14066,14749,15889,19320,
#Partially deleted in new
chr22	31085093	31089785	chr22:31085093-31089785	0	+	31088576	31089785	789624	7	198,118,149,94,79,98,87,	0,1989,2871,3419,3605,3778,4605,
#Deleted in new
chr22	31087877	31089725	chr22:31087877-31089725	0	+	31087937	31089725	789624	5	236,94,79,98,27,	0,635,821,994,1821,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr22	31088101	31101783	chr22:31088101-31101783	0	+	31088101	31088101	8553170	15	12,94,79,98,321,73,72,522,173,1595,63,70,174,835,899,	0,411,597,770,1597,2006,2706,2859,3573,7201,8896,9167,10565,10960,12783,
#Deleted in new
chr22	31089655	31091027	chr22:31089655-31091027	0	+	31089655	31089655	8553170	4	364,73,72,67,	0,452,1152,1305,
#Partially deleted in new
chr22	31092467	31099173	chr22:31092467-31099173	0	+	31092467	31099173	789624	6	63,153,76,70,174,112,	0,2835,3066,4801,6199,6594,
#Partially deleted in new
chr22	31093357	31104623	chr22:31093357-31104623	1	+	31093447	31101029	789624	9	519,153,76,70,174,118,152,165,308,	0,1945,2176,3911,5309,5704,6387,7527,10958,
#Partially deleted in new
chr22	31093367	31104623	chr22:31093367-31104623	0	+	31093367	31093367	8553170	11	311,93,153,76,1046,341,174,118,152,165,308,	0,416,1935,2166,2484,3630,5299,5694,6377,7517,10948,
#Partially deleted in new
chr22	31095559	31104624	chr22:31095559-31104624	0	+	31095559	31101029	789624	9	50,165,63,70,174,115,152,165,309,	0,1173,1438,1709,3107,3505,4185,5325,8756,
#Partially deleted in new
chr22	31099661	31104623	chr22:31099661-31104623	0	+	31099661	31099661	8553170	2	235,308,	0,4654,
#Deleted in new
chr22	31101875	31104757	chr22:31101875-31104757	0	+	31101875	31101875	8553170	2	123,2485,	0,397,
#Partially deleted in new
chr22	31104771	31120069	chr22:31104771-31120069	3	-	31104969	31107505	789624	7	357,79,35,36,157,203,187,	0,436,886,1158,2605,2912,15111,
#Partially deleted in new
chr22	31104776	31107568	chr22:31104776-31107568	1	-	31104969	31107505	789624	5	352,79,35,36,192,	0,431,881,1153,2600,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	31104776	31107533	chr22:31104776-31107533	0	-	31104776	31104776	8553170	4	352,79,35,1604,	0,431,881,1153,
#Partially deleted in new
chr22	31104778	31107568	chr22:31104778-31107568	1	-	31104969	31107505	789624	6	350,79,35,21,12,192,	0,429,879,1151,1175,2598,
#Partially deleted in new
chr22	31104925	31107528	chr22:31104925-31107528	0	-	31104925	31104925	8553170	5	203,79,35,234,152,	0,282,732,1004,2451,
#Partially deleted in new
chr22	31105000	31107553	chr22:31105000-31107553	0	-	31105000	31105000	8553170	5	128,79,35,186,177,	0,207,657,929,2376,
#Deleted in new
chr22	31105012	31105764	chr22:31105012-31105764	0	-	31105012	31105012	8553170	2	116,557,	0,195,
#Partially deleted in new
chr22	31105024	31107541	chr22:31105024-31107541	0	-	31105024	31105024	8553170	5	104,79,35,117,165,	0,183,633,905,2352,
#Partially deleted in new
chr22	31105113	31107466	chr22:31105113-31107466	0	-	31105113	31105113	8553170	4	173,35,36,90,	0,544,816,2263,
#Partially deleted in new
chr22	31105438	31107556	chr22:31105438-31107556	0	-	31105438	31105438	8553170	2	527,180,	0,1938,
#Deleted in new
chr22	31113016	31113396	chr22:31113016-31113396	7	+	31113016	31113016	16724991	1	380,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	31122730	31124881	chr22:31122730-31124881	0	+	31122730	31122730	8553170	5	60,197,110,122,37,	0,192,1165,1411,2114,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr22	31122922	31134696	chr22:31122922-31134696	1	+	31124940	31134419	789624	14	197,122,1166,114,109,117,176,112,110,184,138,78,105,784,	0,1219,1922,3453,3690,3998,4434,5028,5291,5548,10175,10483,10687,10990,
#Partially deleted in new
chr22	31122922	31134696	chr22:31122922-31134696	1	+	31126409	31134419	789624	12	197,196,109,117,176,112,110,184,138,78,105,784,	0,3371,3690,3998,4434,5028,5291,5548,10175,10483,10687,10990,
#Partially deleted in new
chr22	31122965	31134696	chr22:31122965-31134696	1	+	31123014	31134419	789624	13	154,1166,114,109,117,176,112,110,184,138,78,105,784,	0,1879,3410,3647,3955,4391,4985,5248,5505,10132,10440,10644,10947,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	31122965	31125373	chr22:31122965-31125373	0	+	31124940	31125373	789624	3	154,122,529,	0,1176,1879,
#Partially deleted in new
chr22	31122974	31134696	chr22:31122974-31134696	0	+	31122974	31122974	8553170	8	145,114,920,112,110,184,138,1087,	0,3401,3638,4976,5239,5496,10123,10635,
#Partially deleted in new
chr22	31122983	31127037	chr22:31122983-31127037	0	+	31126409	31127037	789624	4	136,196,109,117,	0,3310,3629,3937,
#Partially deleted in new
chr22	31122993	31134696	chr22:31122993-31134696	1	+	31125840	31134419	789624	14	126,62,178,114,109,117,176,112,110,184,138,78,105,784,	0,1851,2839,3382,3619,3927,4363,4957,5220,5477,10104,10412,10616,10919,
#Partially deleted in new
chr22	31122993	31134696	chr22:31122993-31134696	3	+	31123014	31134419	789624	13	126,62,114,109,117,176,112,110,184,138,78,105,784,	0,1851,3382,3619,3927,4363,4957,5220,5477,10104,10412,10616,10919,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr22	31122993	31134696	chr22:31122993-31134696	1	+	31125840	31134419	789624	15	126,122,62,178,114,109,117,176,112,110,184,138,78,105,784,	0,1148,1851,2839,3382,3619,3927,4363,4957,5220,5477,10104,10412,10616,10919,
#Partially deleted in new
chr22	31127759	31134636	chr22:31127759-31134636	1	+	31128219	31134419	789624	6	303,110,184,138,105,724,	0,454,711,5338,5850,6153,
#Partially deleted in new
chr22	31127788	31134636	chr22:31127788-31134636	1	+	31128219	31134419	789624	7	274,110,184,138,78,105,724,	0,425,682,5309,5617,5821,6124,
#Partially deleted in new
chr22	31127801	31134636	chr22:31127801-31134636	1	+	31128219	31134419	789624	6	522,184,138,78,105,724,	0,669,5296,5604,5808,6111,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	31134808	31140607	chr22:31134808-31140607	3	-	31135722	31140354	789624	7	1128,117,133,284,135,133,767,	0,1874,2099,2901,3467,3858,5032,
#Partially deleted in new
chr22	31155965	31156647	chr22:31155965-31156647	7	-	31155965	31155965	16724991	1	682,	0,
#Deleted in new
chr22	31160061	31160119	chr22:31160061-31160119	3	-	31160061	31160061	5263520	1	58,	0,
#Partially deleted in new
chr22	31160182	31204571	chr22:31160182-31204571	0	+	31160182	31160182	8553170	5	121,19,222,118,83,	0,32501,36753,41315,44306,
#Partially deleted in new
chr22	31160192	31207019	chr22:31160192-31207019	3	+	31187094	31204586	789624	7	111,224,19,113,55,118,2531,	0,26854,32491,35276,36743,41305,44296,
#Partially deleted in new
chr22	31160207	31207013	chr22:31160207-31207013	0	+	31160207	31160207	789624	6	96,19,113,222,118,2525,	0,32476,35261,36728,41290,44281,
#Partially deleted in new
chr22	31160210	31207013	chr22:31160210-31207013	1	+	31187094	31197101	789624	7	93,224,19,113,223,118,2525,	0,26836,32473,35258,36725,41287,44278,
#Partially deleted in new
chr22	31160210	31207013	chr22:31160210-31207013	0	+	31187094	31204586	789624	8	93,224,19,113,55,118,478,1637,	0,26836,32473,35258,36725,41287,44278,45166,
#Partially deleted in new
chr22	31160242	31207012	chr22:31160242-31207012	1	+	31187094	31204586	789624	5	61,224,19,118,2524,	0,26804,32441,41255,44246,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	31160242	31197045	chr22:31160242-31197045	0	+	31160242	31160242	8553170	5	61,98,224,19,110,	0,22726,26804,32441,36693,
#Deleted in new
chr22	31205263	31205616	chr22:31205263-31205616	3	-	31205263	31205263	8553170	1	353,	0,
#Partially deleted in new
chr22	31212238	31259046	chr22:31212238-31259046	0	+	31212238	31212238	8553170	3	186,100,756,	0,13481,46052,
#Partially deleted in new
chr22	31212273	31277638	chr22:31212273-31277638	1	+	31258408	31277140	789624	15	151,136,110,189,106,197,187,87,132,57,66,175,56,158,850,	0,46017,46847,47615,49860,50321,53672,54710,55502,55870,58862,60256,61178,62877,64515,
#Partially deleted in new
chr22	31212294	31280080	chr22:31212294-31280080	3	+	31212408	31278441	0	16	130,100,136,110,189,106,197,187,87,132,57,66,175,56,158,1784,	0,13425,45996,46826,47594,49839,50300,53651,54689,55481,55849,58841,60235,61157,62856,66002,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	31222744	31222853	chr22:31222744-31222853	3	-	31222744	31222744	8553170	1	109,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	31230070	31230172	chr22:31230070-31230172	3	-	31230070	31230070	8553170	1	102,	0,
#Partially deleted in new
chr22	31248357	31258484	chr22:31248357-31258484	0	+	31248716	31258484	789624	2	412,194,	0,9933,
#Partially deleted in new
chr22	31248401	31279734	chr22:31248401-31279734	1	+	31248716	31278441	0	15	368,136,110,189,106,197,187,87,132,57,66,175,56,158,1438,	0,9889,10719,11487,13732,14193,17544,18582,19374,19742,22734,24128,25050,26749,29895,
#Partially deleted in new
chr22	31248486	31277638	chr22:31248486-31277638	1	+	31248716	31277140	0	15	283,136,110,189,106,197,187,87,132,57,66,175,56,158,850,	0,9804,10634,11402,13647,14108,17459,18497,19289,19657,22649,24043,24965,26664,28302,
#Partially deleted in new
chr22	31258958	31266132	chr22:31258958-31266132	0	+	31258958	31258958	8553170	5	272,189,106,197,187,	0,930,3175,3636,6987,
#Partially deleted in new
chr22	31272470	31275665	chr22:31272470-31275665	0	+	31272470	31272470	8553170	3	234,56,515,	0,981,2680,
#Partially deleted in new
chr22	31272673	31278586	chr22:31272673-31278586	0	+	31272673	31272673	8553170	5	31,72,56,158,290,	0,171,778,2477,5623,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	31281592	31292528	chr22:31281592-31292528	3	-	31283083	31292344	789624	6	1696,79,201,120,117,254,	0,7722,7906,9372,9587,10682,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	31281593	31290754	chr22:31281593-31290754	0	-	31281593	31281593	8553170	3	1695,79,1256,	0,7721,7905,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	31281612	31292534	chr22:31281612-31292534	1	-	31283274	31292344	789624	5	1676,201,120,117,260,	0,7886,9352,9567,10662,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	31281678	31290726	chr22:31281678-31290726	0	-	31281678	31281678	8553170	4	1610,79,201,794,	0,7636,7820,8254,
#Partially deleted in new
chr22	31289037	31292479	chr22:31289037-31292479	1	-	31289196	31292344	789624	5	356,201,120,117,205,	0,461,1927,2142,3237,
#Partially deleted in new
chr22	31289640	31292488	chr22:31289640-31292488	0	-	31289640	31292344	789624	4	127,120,117,214,	0,1324,1539,2634,
#Partially deleted in new
chr22	31292498	31338021	chr22:31292498-31338021	3	+	31292498	31292498	8553170	2	200,354,	0,45169,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	31305403	31305512	chr22:31305403-31305512	7	+	31305403	31305403	16724991	1	109,	0,
#Partially deleted in new
chr22	31325803	31346232	chr22:31325803-31346232	3	-	31326890	31345602	0	5	1506,138,172,64,1901,	0,2983,9888,17093,18528,
#Partially deleted in new
chr22	31325808	31346232	chr22:31325808-31346232	1	-	31326890	31345602	0	4	1501,172,64,1901,	0,9883,17088,18523,
#Partially deleted in new
chr22	31325808	31346232	chr22:31325808-31346232	1	-	31327275	31345602	0	5	1501,73,172,64,1901,	0,2978,9883,17088,18523,
#Partially deleted in new
chr22	31335348	31338021	chr22:31335348-31338021	0	+	31335348	31335348	789624	2	68,354,	0,2319,
#Partially deleted in new
chr22	31335417	31343285	chr22:31335417-31343285	0	-	31335417	31335417	8553170	2	446,389,	0,7479,
#Deleted in new
chr22	31340676	31345776	chr22:31340676-31345776	1	-	31341404	31345602	0	3	1007,64,1445,	0,2220,3655,
#Deleted in new
chr22	31340676	31343591	chr22:31340676-31343591	0	-	31340676	31340676	8553170	2	1007,695,	0,2220,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	31346776	31348719	chr22:31346776-31348719	3	+	31346776	31346776	8553170	1	1943,	0,
#Deleted in new
chr22	31346885	31347406	chr22:31346885-31347406	0	+	31346885	31346885	8553170	1	521,	0,
#Partially deleted in new
chr22	31399522	31434452	chr22:31399522-31434452	3	+	31399683	31433971	0	9	203,124,176,70,170,131,168,123,581,	0,1097,3506,11489,20733,23757,27092,27537,34349,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	31399609	31423319	chr22:31399609-31423319	0	+	31399683	31411037	789624	6	116,124,70,170,92,40,	0,1010,11402,20646,21698,23670,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	31399616	31423346	chr22:31399616-31423346	0	+	31399616	31399616	8553170	7	109,124,176,70,170,92,67,	0,1003,3412,11395,20639,21691,23663,
#Partially deleted in new
chr22	31399632	31411060	chr22:31399632-31411060	0	+	31399632	31399632	8553170	3	93,176,49,	0,3396,11379,
#Partially deleted in new
chr22	31426512	31434155	chr22:31426512-31434155	0	+	31426512	31426512	8553170	3	270,123,284,	0,547,7359,
#Partially deleted in new
chr22	31426740	31528740	chr22:31426740-31528740	0	+	31426740	31508258	789624	4	42,123,122,51,	0,319,81514,101949,
#Partially deleted in new
chr22	31436976	31439907	chr22:31436976-31439907	0	-	31436976	31436976	8553170	3	366,133,98,	0,709,2833,
#Partially deleted in new
chr22	31439358	31489824	chr22:31439358-31489824	1	-	31439879	31488718	0	17	763,165,345,133,85,143,80,184,72,197,180,136,176,128,74,123,131,	0,1345,2415,3603,5247,8067,8794,9989,10930,14821,15777,16493,19116,28816,32485,49264,50335,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	31439364	31451260	chr22:31439364-31451260	0	-	31439364	31439364	8553170	9	757,165,345,133,85,143,80,184,972,	0,1339,2409,3597,5241,8061,8788,9983,10924,
#Partially deleted in new
chr22	31439366	31489587	chr22:31439366-31489587	1	-	31439879	31488718	0	19	755,165,345,133,85,140,80,184,72,233,180,136,176,202,287,128,74,123,197,	0,1337,2407,3595,5239,8059,8786,9981,10922,14777,15769,16485,19108,23565,24314,28808,32477,49256,50024,
#Partially deleted in new
chr22	31439368	31489741	chr22:31439368-31489741	3	-	31439879	31488718	0	19	753,165,345,133,85,140,80,184,72,233,180,136,176,202,287,128,74,123,48,	0,1335,2405,3593,5237,8057,8784,9979,10920,14775,15767,16483,19106,23563,24312,28806,32475,49254,50325,
#Partially deleted in new
chr22	31439372	31488745	chr22:31439372-31488745	1	-	31439879	31488718	789624	17	749,165,345,133,85,140,80,184,233,180,136,176,202,287,128,74,123,	0,1331,2401,3589,5233,8053,8780,9975,14771,15763,16479,19102,23559,24308,28802,32471,49250,
#Partially deleted in new
chr22	31441802	31449383	chr22:31441802-31449383	0	-	31446980	31449383	789624	7	316,133,85,71,140,80,36,	0,1159,2803,5135,5623,6350,7545,
#Partially deleted in new
chr22	31442034	31443419	chr22:31442034-31443419	0	-	31442034	31442034	8553170	2	84,458,	0,927,
#Partially deleted in new
chr22	31444437	31449490	chr22:31444437-31449490	0	-	31444437	31444437	8553170	4	253,143,80,143,	0,2988,3715,4910,
#Partially deleted in new
chr22	31444631	31455208	chr22:31444631-31455208	0	-	31444631	31455208	789624	7	59,140,80,61,72,233,73,	0,2794,3521,4716,5657,9512,10504,
#Partially deleted in new
chr22	31454250	31464056	chr22:31454250-31464056	0	+	31454250	31454250	8553170	2	173,327,	0,9479,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	31461663	31464204	chr22:31461663-31464204	3	+	31461663	31461663	8553170	2	140,475,	0,2066,
#Partially deleted in new
chr22	31463699	31489242	chr22:31463699-31489242	0	-	31463699	31488718	789624	5	268,128,74,123,95,	0,4475,8144,24923,25448,
#Partially deleted in new
chr22	31468281	31489937	chr22:31468281-31489937	0	-	31468281	31488718	789624	4	21,74,123,33,	0,3562,20341,21623,
#Partially deleted in new
chr22	31468281	31496108	chr22:31468281-31496108	0	-	31468281	31488718	789624	4	21,74,123,156,	0,3562,20341,27671,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	31479382	31479489	chr22:31479382-31479489	3	-	31479382	31479382	8553170	1	107,	0,
#Partially deleted in new
chr22	31488687	31529067	chr22:31488687-31529067	0	+	31488687	31488687	8553170	3	96,122,378,	0,19567,40002,
#Partially deleted in new
chr22	31496138	31618551	chr22:31496138-31618551	1	+	31508284	31618418	0	31	499,122,174,111,95,118,103,157,162,71,98,67,131,82,179,76,96,77,103,97,161,75,75,177,254,72,232,133,79,112,238,	0,12116,32551,50722,54115,60803,65151,76919,79092,82243,87736,88929,93308,106073,106468,107605,108170,108730,110189,111798,115004,115627,117003,117215,117463,118650,118909,120606,120861,121976,122175,
#Partially deleted in new
chr22	31496274	31618551	chr22:31496274-31618551	1	+	31508284	31618418	0	32	363,122,174,72,111,95,118,103,157,162,71,98,67,131,82,179,76,96,77,103,97,161,75,75,177,254,72,232,133,79,112,238,	0,11980,32415,34783,50586,53979,60667,65015,76783,78956,82107,87600,88793,93172,105937,106332,107469,108034,108594,110053,111662,114868,115491,116867,117079,117327,118514,118773,120470,120725,121840,122039,
#Partially deleted in new
chr22	31496386	31618446	chr22:31496386-31618446	1	+	31508284	31618418	789624	29	251,122,111,103,157,162,71,93,98,67,131,82,179,76,96,77,103,97,161,75,75,177,254,72,232,133,79,112,133,	0,11868,50474,64903,76671,78844,81995,83885,87488,88681,93060,105825,106220,107357,107922,108482,109941,111550,114756,115379,116755,116967,117215,118402,118661,120358,120613,121728,121927,
#Partially deleted in new
chr22	31496463	31528866	chr22:31496463-31528866	0	+	31496463	31496463	8553170	4	174,122,86,177,	0,11791,24771,32226,
#Partially deleted in new
chr22	31496518	31531105	chr22:31496518-31531105	0	+	31508284	31530634	789624	5	119,122,174,193,48,	0,11736,32171,34073,34539,
#Partially deleted in new
chr22	31496537	31618548	chr22:31496537-31618548	1	+	31508284	31618418	0	31	100,118,111,95,118,103,157,162,71,93,98,67,131,82,179,76,96,77,103,97,161,75,75,177,254,72,232,133,79,112,235,	0,11721,50323,53716,60404,64752,76520,78693,81844,83734,87337,88530,92909,105674,106069,107206,107771,108331,109790,111399,114605,115228,116604,116816,117064,118251,118510,120207,120462,121577,121776,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	31496557	31528835	chr22:31496557-31528835	0	+	31508284	31528835	789624	4	80,101,122,146,	0,690,11697,32132,
#Partially deleted in new
chr22	31496562	31618586	chr22:31496562-31618586	3	+	31508284	31618418	0	33	75,122,174,72,111,95,118,103,157,162,71,93,98,67,131,82,179,76,96,77,103,97,161,75,75,177,254,72,232,133,79,112,273,	0,11692,32127,34495,50298,53691,60379,64727,76495,78668,81819,83709,87312,88505,92884,105649,106044,107181,107746,108306,109765,111374,114580,115203,116579,116791,117039,118226,118485,120182,120437,121552,121751,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr22	31496582	31618548	chr22:31496582-31618548	0	+	31496582	31496582	8553170	31	55,122,174,72,111,95,118,103,157,162,71,93,98,67,131,82,179,96,1562,97,161,75,75,177,254,72,232,133,79,112,235,	0,11672,32107,34475,50278,53671,60359,64707,76475,78648,81799,83689,87292,88485,92864,105629,106024,107726,108286,111354,114560,115183,116559,116771,117019,118206,118465,120162,120417,121532,121731,
#Partially deleted in new
chr22	31508254	31613453	chr22:31508254-31613453	0	+	31508284	31602641	789624	19	122,174,72,111,95,118,103,157,131,82,179,76,77,103,97,161,75,75,100,	0,20435,22803,38606,41999,48687,53035,64803,81192,93957,94352,95489,96614,98073,99682,102888,103511,104887,105099,
#Partially deleted in new
chr22	31508284	31530634	chr22:31508284-31530634	1	+	31508284	31530634	789624	3	92,174,43,	0,20405,22307,
#Deleted in new
chr22	31521198	31521592	chr22:31521198-31521592	7	-	31521198	31521198	16724991	1	394,	0,
#Partially deleted in new
chr22	31528744	31561333	chr22:31528744-31561333	0	+	31528744	31561333	789624	5	119,72,95,118,44,	0,2313,21509,28197,32545,
#Partially deleted in new
chr22	31528819	31550677	chr22:31528819-31550677	0	+	31528819	31528819	8553170	4	44,72,111,424,	0,2238,18041,21434,
#Partially deleted in new
chr22	31538351	31538589	chr22:31538351-31538589	7	-	31538351	31538351	16724991	1	238,	0,
#Partially deleted in new
chr22	31559482	31559939	chr22:31559482-31559939	7	+	31559482	31559482	16724991	1	457,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	31572762	31583934	chr22:31572762-31583934	0	+	31572762	31572762	8553170	4	452,162,71,60,	0,2468,5619,11112,
#Partially deleted in new
chr22	31572976	31583877	chr22:31572976-31583877	0	+	31572976	31572976	8553170	5	238,162,71,93,3,	0,2254,5405,7295,10898,
#Partially deleted in new
chr22	31573173	31618547	chr22:31573173-31618547	0	+	31573173	31613489	789624	21	41,162,71,93,98,67,131,82,179,97,161,75,75,177,254,72,232,133,79,112,234,	0,2057,5208,7098,10701,11894,16273,29038,29433,34763,37969,38592,39968,40180,40428,41615,41874,43571,43826,44941,45140,
#Partially deleted in new
chr22	31577947	31585126	chr22:31577947-31585126	0	+	31577947	31577947	8553170	3	505,98,59,	0,5927,7120,
#Partially deleted in new
chr22	31580087	31583969	chr22:31580087-31583969	0	+	31580087	31580087	8553170	2	277,95,	0,3787,
#Partially deleted in new
chr22	31580271	31614860	chr22:31580271-31614860	0	+	31580271	31614860	789624	16	93,98,67,131,82,179,76,77,103,97,161,75,75,177,254,72,	0,3603,4796,9175,21940,22335,23472,24597,26056,27665,30871,31494,32870,33082,33330,34517,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	31583905	31587912	chr22:31583905-31587912	0	+	31583905	31587366	789624	3	67,67,585,	0,1162,3422,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	31604313	31606726	chr22:31604313-31606726	0	+	31604313	31604313	8553170	3	91,77,399,	0,555,2014,
#Partially deleted in new
chr22	31604568	31611769	chr22:31604568-31611769	0	+	31604568	31604568	8553170	6	103,77,103,97,161,4,	0,300,1759,3368,6574,7197,
#Partially deleted in new
chr22	31607650	31611801	chr22:31607650-31611801	0	+	31607650	31607650	8553170	3	383,161,36,	0,3492,4115,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	31611765	31612442	chr22:31611765-31612442	0	+	31611765	31611765	8553170	2	75,444,	0,233,
#Deleted in new
chr22	31612772	31613715	chr22:31612772-31613715	0	+	31612772	31612772	8553170	3	444,177,114,	0,581,829,
#Partially deleted in new
chr22	31613834	31618548	chr22:31613834-31618548	0	+	31613834	31613834	8553170	6	21,72,232,133,15,235,	0,954,1213,2910,4377,4479,
#Partially deleted in new
chr22	31614166	31618548	chr22:31614166-31618548	0	+	31614166	31614166	8553170	6	694,232,133,79,112,235,	0,881,2578,2833,3948,4147,
#Partially deleted in new
chr22	31614370	31618547	chr22:31614370-31618547	0	+	31614370	31614370	8553170	3	2507,79,433,	0,2629,3744,
#Partially deleted in new
chr22	31614385	31618548	chr22:31614385-31618548	0	+	31614385	31614385	8553170	5	894,133,79,112,235,	0,2359,2614,3729,3928,
#Deleted in new
chr22	31618490	31628221	chr22:31618490-31628221	1	-	31619611	31625815	789624	8	1346,161,147,139,237,166,254,219,	0,2062,2505,2843,3158,5193,7272,9512,
#Partially deleted in new
chr22	31618490	31662215	chr22:31618490-31662215	0	-	31618490	31618490	8553170	7	1346,161,147,552,176,80,72,	0,2062,2505,2843,29610,32208,43653,
#Partially deleted in new
chr22	31618510	31662221	chr22:31618510-31662221	0	-	31648170	31662208	789624	7	1326,161,147,139,237,176,78,	0,2042,2485,2823,3138,29590,43633,
#Deleted in new
chr22	31618514	31630824	chr22:31618514-31630824	1	-	31619611	31625815	789624	9	1322,161,147,139,237,166,254,208,21,	0,2038,2481,2819,3134,5169,7248,9488,12289,
#Deleted in new
chr22	31618558	31630862	chr22:31618558-31630862	0	-	31618558	31618558	8553170	6	1278,161,477,237,166,59,	0,1994,2437,3090,5125,12245,
#Deleted in new
chr22	31618613	31630831	chr22:31618613-31630831	1	-	31619789	31625815	789624	7	1223,147,139,237,166,254,28,	0,2382,2720,3035,5070,7149,12190,
#Partially deleted in new
chr22	31618976	31662180	chr22:31618976-31662180	0	-	31619611	31662180	789624	8	860,47,147,139,237,176,80,37,	0,1576,2019,2357,2672,29124,31722,43167,
#Partially deleted in new
chr22	31619102	31662432	chr22:31619102-31662432	1	-	31619611	31662208	789624	8	734,161,147,139,237,176,80,289,	0,1450,1893,2231,2546,28998,31596,43041,
#Partially deleted in new
chr22	31619443	31662203	chr22:31619443-31662203	0	-	31619443	31619443	8553170	6	393,161,890,176,80,60,	0,1109,1552,28657,31255,42700,
#Deleted in new
chr22	31620552	31625786	chr22:31620552-31625786	0	-	31620552	31620552	8553170	6	161,147,139,237,166,206,	0,443,781,1096,3131,5028,
#Partially deleted in new
chr22	31620577	31638398	chr22:31620577-31638398	2	-	31620577	31620577	8553170	5	136,147,139,237,33,	0,418,756,1071,17788,
#Deleted in new
chr22	31621053	31628982	chr22:31621053-31628982	0	-	31621053	31625815	789624	6	89,139,237,166,254,130,	0,280,595,2630,4709,7799,
#Deleted in new
chr22	31621466	31621531	chr22:31621466-31621531	3	-	31621466	31621466	5263520	1	65,	0,
#Deleted in new
chr22	31621861	31626294	chr22:31621861-31626294	0	-	31621861	31625815	789624	3	24,166,532,	0,1822,3901,
#Partially deleted in new
chr22	31623683	31638445	chr22:31623683-31638445	0	-	31623683	31625815	789624	4	166,254,109,80,	0,2079,8499,14682,
#Partially deleted in new
chr22	31623683	31638405	chr22:31623683-31638405	0	-	31623683	31625815	789624	3	166,254,40,	0,2079,14682,
#Deleted in new
chr22	31625821	31630006	chr22:31625821-31630006	0	-	31625821	31625821	8553170	4	195,208,129,305,	0,2181,3031,3880,
#Deleted in new
chr22	31625877	31630799	chr22:31625877-31630799	0	-	31625877	31625877	8553170	4	139,129,109,278,	0,2975,3898,4644,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	31676255	31712745	chr22:31676255-31712745	0	-	31676747	31712745	789624	6	763,72,107,172,72,663,	0,11900,25400,27294,28399,35827,
#Partially deleted in new
chr22	31681346	31750131	chr22:31681346-31750131	3	-	31685526	31738860	789624	9	4457,72,107,172,72,5209,73,525,139,	0,6809,20309,22203,23308,30736,44191,57040,68646,
#Partially deleted in new
chr22	31681349	31703718	chr22:31681349-31703718	0	-	31685526	31703718	789624	5	785,2175,72,107,169,	0,2279,6806,20306,22200,
#Partially deleted in new
chr22	31685041	31713845	chr22:31685041-31713845	0	-	31688206	31713845	789624	5	762,72,172,72,1763,	0,3114,18508,19613,27041,
#Partially deleted in new
chr22	31704443	31712347	chr22:31704443-31712347	0	-	31704443	31704443	8553170	2	283,265,	0,7639,
#Partially deleted in new
chr22	31716726	31750072	chr22:31716726-31750072	0	-	31716726	31716726	8553170	3	565,73,80,	0,8811,33266,
#Partially deleted in new
chr22	31725543	31750140	chr22:31725543-31750140	0	-	31725543	31738860	789624	3	67,525,69,	0,12843,24528,
#Partially deleted in new
chr22	31753866	31906992	chr22:31753866-31906992	1	+	31754921	31906497	0	40	130,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,66,184,161,118,168,220,134,109,155,78,133,109,228,170,172,61,83,788,	0,995,4679,6789,11108,12718,14947,24232,30040,30947,38166,38878,43733,44715,48837,50295,50975,52255,55744,56654,61125,65155,80048,83105,84818,89228,89778,91151,92967,103578,116723,119388,120406,122290,125658,139715,143615,147875,152117,152338,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr22	31753897	31837324	chr22:31753897-31837324	1	+	31754921	31837291	789624	26	99,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,136,98,66,353,	0,964,4648,6758,11077,12687,14916,24201,30009,30916,38135,38847,43702,44684,48806,50264,50944,52224,55713,56623,61094,65124,67604,68795,80017,83074,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr22	31753897	31837279	chr22:31753897-31837279	0	+	31754921	31837279	789624	24	99,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,66,308,	0,964,4648,6758,11077,12687,14916,24201,30009,30916,38135,38847,43702,44684,48806,50264,50944,52224,55713,56623,61094,65124,80017,83074,
#Partially deleted in new
chr22	31753899	31907005	chr22:31753899-31907005	1	+	31754921	31906497	0	43	97,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,136,98,66,157,161,118,168,220,134,109,66,155,78,133,109,228,170,172,61,83,801,	0,962,4646,6756,11075,12685,14914,24199,30007,30914,38133,38845,43700,44682,48804,50262,50942,52222,55711,56621,61092,65122,67602,68793,80015,83099,84785,89195,89745,91118,92934,103545,107468,116690,119355,120373,122257,125625,139682,143582,147842,152084,152305,
#Partially deleted in new
chr22	31753911	31906989	chr22:31753911-31906989	1	+	31754921	31906497	0	42	85,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,136,98,66,184,161,118,168,220,134,109,155,78,133,109,228,170,172,61,83,785,	0,950,4634,6744,11063,12673,14902,24187,29995,30902,38121,38833,43688,44670,48792,50250,50930,52210,55699,56609,61080,65110,67590,68781,80003,83060,84773,89183,89733,91106,92922,103533,116678,119343,120361,122245,125613,139670,143570,147830,152072,152293,
#Partially deleted in new
chr22	31753931	31907001	chr22:31753931-31907001	1	+	31754921	31906497	789624	41	65,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,66,184,161,118,168,220,134,109,66,155,78,133,109,228,170,172,61,83,797,	0,930,4614,6724,11043,12653,14882,24167,29975,30882,38101,38813,43668,44650,48772,50230,50910,52190,55679,56589,61060,65090,79983,83040,84753,89163,89713,91086,92902,103513,107436,116658,119323,120341,122225,125593,139650,143550,147810,152052,152273,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	31753943	31784788	chr22:31753943-31784788	1	+	31754921	31784005	789624	9	53,118,88,47,86,84,50,70,882,	0,918,4602,6712,11031,12641,14870,24155,29963,
#Partially deleted in new
chr22	31753954	31906998	chr22:31753954-31906998	1	+	31754921	31906497	789624	42	42,118,88,47,86,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,136,98,66,184,161,118,168,220,134,109,66,155,78,133,109,228,170,172,61,83,794,	0,907,4591,6701,11020,14859,24144,29952,30859,38078,38790,43645,44627,48749,50207,50887,52167,55656,56566,61037,65067,67547,68738,79960,83017,84730,89140,89690,91063,92879,103490,107413,116635,119300,120318,122202,125570,139627,143527,147787,152029,152250,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	31753954	31769772	chr22:31753954-31769772	0	+	31753954	31753954	8553170	7	42,118,88,47,86,84,959,	0,907,4591,6701,11020,12630,14859,
#Partially deleted in new
chr22	31753954	31906989	chr22:31753954-31906989	0	+	31754921	31802763	789624	42	42,118,88,47,86,84,50,70,79,62,70,73,100,75,135,62,74,70,37,121,221,204,136,98,66,62,161,118,168,220,134,109,155,78,133,109,228,170,172,61,83,785,	0,907,4591,6701,11020,12630,14859,24144,29952,30859,38078,38790,43645,44627,48749,50207,50887,52167,55656,56566,61037,65067,67547,68738,79960,83139,84730,89140,89690,91063,92879,103490,116635,119300,120318,122202,125570,139627,143527,147787,152029,152250,
#Partially deleted in new
chr22	31753963	31906970	chr22:31753963-31906970	0	+	31754921	31810568	789624	41	33,118,88,47,86,50,70,79,62,70,73,104,75,135,62,74,37,121,221,204,136,98,66,184,161,118,168,220,134,109,66,155,78,133,109,228,170,172,61,83,766,	0,898,4582,6692,11011,14850,24135,29943,30850,38069,38781,43636,44618,48740,50198,50878,55647,56557,61028,65058,67538,68729,79951,83008,84721,89131,89681,91054,92870,103481,107404,116626,119291,120309,122193,125561,139618,143518,147778,152020,152241,
#Partially deleted in new
chr22	31753963	31815973	chr22:31753963-31815973	1	+	31754921	31815429	0	22	33,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,558,	0,898,4582,6692,11011,12621,14850,24135,29943,30850,38069,38781,43636,44618,48740,50198,50878,52158,55647,56557,61028,61452,
#Partially deleted in new
chr22	31753967	31755511	chr22:31753967-31755511	0	+	31753967	31753967	8553170	2	29,650,	0,894,
#Partially deleted in new
chr22	31753970	31906989	chr22:31753970-31906989	1	+	31754921	31906497	0	43	26,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,136,98,66,184,161,118,168,220,134,109,66,155,78,133,109,228,170,172,61,83,785,	0,891,4575,6685,11004,12614,14843,24128,29936,30843,38062,38774,43629,44611,48733,50191,50871,52151,55640,56550,61021,65051,67531,68722,79944,83001,84714,89124,89674,91047,92863,103474,107397,116619,119284,120302,122186,125554,139611,143511,147771,152013,152234,
#Partially deleted in new
chr22	31753973	31907014	chr22:31753973-31907014	1	+	31754921	31906497	0	42	23,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,136,98,66,157,161,118,168,220,134,109,155,78,133,109,228,170,172,61,83,810,	0,888,4572,6682,11001,12611,14840,24125,29933,30840,38059,38771,43626,44608,48730,50188,50868,52148,55637,56547,61018,65048,67528,68719,79941,83025,84711,89121,89671,91044,92860,103471,116616,119281,120299,122183,125551,139608,143508,147768,152010,152231,
#Partially deleted in new
chr22	31753973	31815971	chr22:31753973-31815971	1	+	31754921	31815429	789624	21	23,118,88,47,86,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,556,	0,888,4572,6682,11001,14840,24125,29933,30840,38059,38771,43626,44608,48730,50188,50868,52148,55637,56547,61018,61442,
#Partially deleted in new
chr22	31753974	31906976	chr22:31753974-31906976	0	+	31754921	31831110	789624	42	22,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,162,66,184,161,118,168,220,134,109,66,155,78,133,109,228,170,172,61,83,772,	0,887,4571,6681,11000,12610,14839,24124,29932,30839,38058,38770,43625,44607,48729,50187,50867,52147,55636,56546,61017,65047,77089,79940,82997,84710,89120,89670,91043,92859,103470,107393,116615,119280,120298,122182,125550,139607,143507,147767,152009,152230,
#Partially deleted in new
chr22	31753976	31906994	chr22:31753976-31906994	0	+	31754921	31873283	789624	43	20,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,136,98,66,184,161,118,168,220,134,109,66,155,161,133,109,228,170,172,61,83,790,	0,885,4569,6679,10998,12608,14837,24122,29930,30837,38056,38768,43623,44605,48727,50185,50865,52145,55634,56544,61015,65045,67525,68716,79938,82995,84708,89118,89668,91041,92857,103468,107391,116613,119195,120296,122180,125548,139605,143505,147765,152007,152228,
#Partially deleted in new
chr22	31753978	31778137	chr22:31753978-31778137	0	+	31766644	31778137	789624	8	18,118,107,47,86,84,50,39,	0,883,4548,6677,10996,12606,14835,24120,
#Partially deleted in new
chr22	31753984	31906603	chr22:31753984-31906603	0	+	31754921	31879603	789624	40	12,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,136,98,66,184,161,118,168,220,134,109,66,155,228,170,172,61,83,399,	0,877,4561,6671,10990,12600,14829,24114,29922,30829,38048,38760,43615,44597,48719,50177,50857,52137,55626,56536,61007,65037,67517,68708,79930,82987,84700,89110,89660,91033,92849,103460,107383,116605,125540,139597,143497,147757,151999,152220,
#Partially deleted in new
chr22	31753994	31906975	chr22:31753994-31906975	1	+	31754921	31906497	789624	41	170,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,66,184,161,118,168,220,134,109,66,155,78,133,109,228,170,172,61,83,771,	0,867,4551,6661,10980,12590,14819,24104,29912,30819,38038,38750,43605,44587,48709,50167,50847,52127,55616,56526,60997,65027,79920,82977,84690,89100,89650,91023,92839,103450,107373,116595,119260,120278,122162,125530,139587,143487,147747,151989,152210,
#Boundary problem: need 42, got 0, diff 42, mapped 0.0
chr22	31754000	31908033	chr22:31754000-31908033	3	+	31754921	31906497	0	42	164,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,136,98,66,157,161,118,168,220,134,109,155,78,133,109,228,170,172,61,83,1829,	0,861,4545,6655,10974,12584,14813,24098,29906,30813,38032,38744,43599,44581,48703,50161,50841,52121,55610,56520,60991,65021,67501,68692,79914,82998,84684,89094,89644,91017,92833,103444,116589,119254,120272,122156,125524,139581,143481,147741,151983,152204,
#Partially deleted in new
chr22	31754013	31906222	chr22:31754013-31906222	0	+	31754921	31906222	789624	42	151,118,88,47,86,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,136,98,66,184,161,118,168,220,134,109,66,155,78,133,109,228,170,172,61,83,18,	0,848,4532,6642,10961,14800,24085,29893,30800,38019,38731,43586,44568,48690,50148,50828,52108,55597,56507,60978,65008,67488,68679,79901,82958,84671,89081,89631,91004,92820,103431,107354,116576,119241,120259,122143,125511,139568,143468,147728,151970,152191,
#Partially deleted in new
chr22	31754014	31906975	chr22:31754014-31906975	0	+	31754921	31766612	789624	42	150,118,88,47,86,65,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,136,98,66,184,161,118,168,220,134,109,155,78,128,109,228,170,172,61,83,771,	0,847,4531,6641,10960,12589,14799,24084,29892,30799,38018,38730,43585,44567,48689,50147,50827,52107,55596,56506,60977,65007,67487,68678,79900,82957,84670,89080,89630,91003,92819,103430,116575,119240,120263,122142,125510,139567,143467,147727,151969,152190,
#Partially deleted in new
chr22	31754018	31815991	chr22:31754018-31815991	1	+	31754921	31815429	0	22	146,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,576,	0,843,4527,6637,10956,12566,14795,24080,29888,30795,38014,38726,43581,44563,48685,50143,50823,52103,55592,56502,60973,61397,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	31754027	31784504	chr22:31754027-31784504	1	+	31754921	31784005	789624	9	137,118,88,47,86,84,50,70,598,	0,834,4518,6628,10947,12557,14786,24071,29879,
#Partially deleted in new
chr22	31754042	31906980	chr22:31754042-31906980	0	+	31754921	31879752	789624	41	122,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,136,98,66,184,161,118,168,220,134,109,155,78,133,228,170,172,61,83,776,	0,819,4503,6613,10932,12542,14771,24056,29864,30771,37990,38702,43557,44539,48661,50119,50799,52079,55568,56478,60949,64979,67459,68650,79872,82929,84642,89052,89602,90975,92791,103402,116547,119212,120230,125482,139539,143439,147699,151941,152162,
#Partially deleted in new
chr22	31754053	31834257	chr22:31754053-31834257	0	+	31754053	31754053	8553170	22	111,118,88,47,86,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,343,	0,808,4492,6602,10921,14760,24045,29853,30760,37979,38691,43546,44528,48650,50108,50788,52068,55557,56467,60938,64968,79861,
#Partially deleted in new
chr22	31754058	31906943	chr22:31754058-31906943	1	+	31754921	31906497	0	43	106,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,136,98,66,184,161,118,168,220,134,109,66,155,78,133,109,228,170,172,61,83,739,	0,803,4487,6597,10916,12526,14755,24040,29848,30755,37974,38686,43541,44523,48645,50103,50783,52063,55552,56462,60933,64963,67443,68634,79856,82913,84626,89036,89586,90959,92775,103386,107309,116531,119196,120214,122098,125466,139523,143423,147683,151925,152146,
#Partially deleted in new
chr22	31754058	31906989	chr22:31754058-31906989	0	+	31754921	31831110	789624	42	106,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,162,66,157,161,118,168,220,134,109,66,155,78,133,109,228,170,172,61,83,785,	0,803,4487,6597,10916,12526,14755,24040,29848,30755,37974,38686,43541,44523,48645,50103,50783,52063,55552,56462,60933,64963,77005,79856,82940,84626,89036,89586,90959,92775,103386,107309,116531,119196,120214,122098,125466,139523,143423,147683,151925,152146,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr22	31754067	31837279	chr22:31754067-31837279	0	+	31754921	31837279	789624	25	97,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,136,98,281,	0,794,4478,6588,10907,12517,14746,24031,29839,30746,37965,38677,43532,44514,48636,50094,50774,52054,55543,56453,60924,64954,67434,68625,82931,
#Partially deleted in new
chr22	31754067	31906992	chr22:31754067-31906992	1	+	31754921	31906382	789624	41	97,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,66,184,161,118,168,220,134,109,66,155,78,133,109,228,170,172,61,111,788,	0,794,4478,6588,10907,12517,14746,24031,29839,30746,37965,38677,43532,44514,48636,50094,50774,52054,55543,56453,60924,64954,79847,82904,84617,89027,89577,90950,92766,103377,107300,116522,119187,120205,122089,125457,139514,143414,147674,151916,152137,
#Partially deleted in new
chr22	31754108	31906768	chr22:31754108-31906768	0	+	31754921	31879752	789624	39	56,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,66,184,161,118,168,220,134,109,155,78,133,228,170,172,61,83,564,	0,753,4437,6547,10866,12476,14705,23990,29798,30705,37924,38636,43491,44473,48595,50053,50733,52013,55502,56412,60883,64913,79806,82863,84576,88986,89536,90909,92725,103336,116481,119146,120164,125416,139473,143373,147633,151875,152096,
#Partially deleted in new
chr22	31754132	31907009	chr22:31754132-31907009	1	+	31754921	31906497	0	42	32,118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,136,98,66,184,161,118,168,220,134,109,155,78,133,109,228,170,172,61,83,805,	0,729,4413,6523,10842,12452,14681,23966,29774,30681,37900,38612,43467,44449,48571,50029,50709,51989,55478,56388,60859,64889,67369,68560,79782,82839,84552,88962,89512,90885,92701,103312,116457,119122,120140,122024,125392,139449,143349,147609,151851,152072,
#Partially deleted in new
chr22	31754861	31906898	chr22:31754861-31906898	1	+	31754921	31906405	0	41	118,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,136,98,66,184,161,118,168,220,134,109,66,155,78,133,109,228,170,172,83,694,	0,3684,5794,10113,11723,13952,23237,29045,29952,37171,37883,42738,43720,47842,49300,49980,51260,54749,55659,60130,64160,66640,67831,79053,82110,83823,88233,88783,90156,91972,102583,106506,115728,118393,119411,121295,124663,138720,142620,151122,151343,
#Partially deleted in new
chr22	31754861	31819040	chr22:31754861-31819040	0	+	31754921	31783955	789624	20	118,88,47,86,84,50,79,62,70,73,104,75,135,62,74,70,37,121,221,19,	0,3684,5794,10113,11723,13952,29045,29952,37171,37883,42738,43720,47842,49300,49980,51260,54749,55659,60130,64160,
#Partially deleted in new
chr22	31754898	31956243	chr22:31754898-31956243	3	+	31754921	31956155	789624	21	81,88,47,86,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,105,	0,3647,5757,10076,13915,23200,29008,29915,37134,37846,42701,43683,47805,49263,49943,51223,54712,55622,60093,64123,201240,
#Partially deleted in new
chr22	31754914	31906730	chr22:31754914-31906730	1	+	31754921	31906497	789624	41	65,88,47,86,84,50,70,79,62,70,73,104,75,135,62,74,70,37,145,221,204,136,98,66,184,161,118,168,220,134,109,155,78,133,109,228,170,172,61,83,526,	0,3631,5741,10060,11670,13899,23184,28992,29899,37118,37830,42685,43667,47789,49247,49927,51207,54696,55606,60077,64107,66587,67778,79000,82057,83770,88180,88730,90103,91919,102530,115675,118340,119358,121242,124610,138667,142567,146827,151069,151290,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	31757201	31757498	chr22:31757201-31757498	3	+	31757201	31757201	8553170	1	297,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	31758577	31784511	chr22:31758577-31784511	0	+	31758577	31784005	789624	6	56,47,86,50,70,605,	0,2078,6397,10236,19521,25329,
#Partially deleted in new
chr22	31760643	31792768	chr22:31760643-31792768	0	+	31760643	31760643	8553170	9	59,86,84,50,70,79,62,70,24,	0,4331,5941,8170,17455,23263,24170,31389,32101,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr22	31765045	31859069	chr22:31765045-31859069	0	+	31765045	31765045	8553170	28	15,84,50,70,79,62,70,73,104,75,135,62,74,70,37,121,221,204,136,98,66,184,161,118,168,220,134,1625,	0,1539,3768,13053,18861,19768,26987,27699,32554,33536,37658,39116,39796,41076,44565,45475,49946,53976,56456,57647,68869,71926,73639,78049,78599,79972,81788,92399,
#Partially deleted in new
chr22	31766638	31802738	chr22:31766638-31802738	0	+	31766638	31784935	789624	10	30,50,70,79,294,70,73,104,75,35,	0,2175,11460,17268,18175,25394,26106,30961,31943,36065,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	31778025	31784504	chr22:31778025-31784504	0	+	31778025	31778025	8553170	2	143,598,	0,5881,
#Partially deleted in new
chr22	31792686	31804219	chr22:31792686-31804219	0	+	31802750	31804219	789624	5	131,104,75,135,58,	0,4913,5895,10017,11475,
#Partially deleted in new
chr22	31804135	31805109	chr22:31804135-31805109	0	+	31804135	31804135	8553170	2	88,268,	0,706,
#Partially deleted in new
chr22	31804841	31880237	chr22:31804841-31880237	0	+	31804841	31804841	8553170	22	74,70,37,121,221,204,136,98,66,184,161,118,168,220,134,109,66,155,78,133,109,713,	0,1280,4769,5679,10150,14180,16660,17851,29073,32130,33843,38253,38803,40176,41992,52603,56526,65748,68413,69431,71315,74683,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	31813915	31823167	chr22:31813915-31823167	0	+	31813915	31813915	8553170	4	1297,204,136,475,	0,5106,7586,8777,
#Partially deleted in new
chr22	31816378	31817491	chr22:31816378-31817491	7	-	31816378	31816378	16724991	3	39,360,78,	0,351,1035,
#Partially deleted in new
chr22	31819065	31906994	chr22:31819065-31906994	0	+	31819065	31879752	789624	19	160,66,184,161,118,168,220,134,109,66,155,78,133,228,170,172,61,83,790,	0,14849,17906,19619,24029,24579,25952,27768,38379,42302,51524,54189,55207,60459,74516,78416,82676,86918,87139,
#Partially deleted in new
chr22	31833848	31838721	chr22:31833848-31838721	0	+	31833848	31833848	8553170	3	132,62,37,	0,3245,4836,
#Partially deleted in new
chr22	31833865	31843662	chr22:31833865-31843662	0	+	31833865	31833865	8553170	5	115,157,161,118,18,	0,3133,4819,9229,9779,
#Partially deleted in new
chr22	31836847	31843659	chr22:31836847-31843659	0	+	31836847	31836847	8553170	4	308,161,118,15,	0,1837,6247,6797,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	31837237	31837298	chr22:31837237-31837298	3	+	31837237	31837237	8553170	1	61,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr22	31844744	31906989	chr22:31844744-31906989	0	+	31844744	31844744	8553170	14	493,134,109,66,155,78,133,109,228,170,172,61,83,785,	0,2089,12700,16623,25845,28510,29528,31412,34780,48837,52737,56997,61239,61460,
#Partially deleted in new
chr22	31846938	31875443	chr22:31846938-31875443	0	+	31846938	31846938	8553170	6	29,109,155,78,133,246,	0,10506,23651,26316,27334,28259,
#Partially deleted in new
chr22	31852906	31906965	chr22:31852906-31906965	0	+	31852906	31852906	8553170	13	86,109,66,155,78,133,109,228,170,172,61,83,761,	0,4538,8461,17683,20348,21366,23250,26618,40675,44575,48835,53077,53298,
#Partially deleted in new
chr22	31852906	31906338	chr22:31852906-31906338	0	+	31852906	31852906	8553170	12	86,109,155,78,133,109,228,170,172,61,83,134,	0,4538,17683,20348,21366,23250,26618,40675,44575,48835,53077,53298,
#Partially deleted in new
chr22	31852915	31906798	chr22:31852915-31906798	0	+	31852915	31852915	8553170	12	77,109,155,161,133,109,228,170,172,61,83,594,	0,4529,17674,20256,21357,23241,26609,40666,44566,48826,53068,53289,
#Partially deleted in new
chr22	31853247	31906975	chr22:31853247-31906975	0	+	31853247	31853247	8553170	12	180,109,155,78,133,109,228,170,172,61,83,771,	0,4197,17342,20007,21025,22909,26277,40334,44234,48494,52736,52957,
#Partially deleted in new
chr22	31861363	31906342	chr22:31861363-31906342	0	+	31861363	31861363	8553170	11	70,155,78,133,109,228,170,172,61,83,138,	0,9226,11891,12909,14793,18161,32218,36118,40378,44620,44841,
#Partially deleted in new
chr22	31861370	31906966	chr22:31861370-31906966	0	+	31861370	31879603	789624	11	63,155,78,133,179,228,170,172,61,83,762,	0,9219,11884,12902,14716,18154,32211,36111,40371,44613,44834,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	31873826	31906975	chr22:31873826-31906975	0	+	31873826	31873826	8553170	8	579,109,228,170,172,61,83,771,	0,2330,5698,19755,23655,27915,32157,32378,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	31873867	31906975	chr22:31873867-31906975	0	+	31873867	31873867	8553170	8	538,109,228,170,172,61,111,771,	0,2289,5657,19714,23614,27874,32116,32337,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	31875738	31907587	chr22:31875738-31907587	0	+	31875738	31875738	8553170	7	527,228,170,172,61,83,1383,	0,3786,17843,21743,26003,30245,30466,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	31875750	31894902	chr22:31875750-31894902	0	+	31875750	31875750	8553170	3	515,228,1321,	0,3774,17831,
#Partially deleted in new
chr22	31890343	31891434	chr22:31890343-31891434	7	-	31890343	31890343	16724991	2	82,408,	0,683,
#Partially deleted in new
chr22	31897634	31907012	chr22:31897634-31907012	0	+	31897634	31906817	789624	3	19,61,208,	0,4107,9170,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	31933520	31945350	chr22:31933520-31945350	3	-	31933520	31933520	789624	3	929,200,118,	0,4395,11712,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	31934010	31938417	chr22:31934010-31938417	0	-	31934010	31934010	8553170	2	439,502,	0,3905,
#Partially deleted in new
chr22	31934039	31945518	chr22:31934039-31945518	0	-	31934039	31934039	8553170	3	410,127,286,	0,3949,11193,
#Partially deleted in new
chr22	31934347	31938454	chr22:31934347-31938454	0	-	31934347	31934347	8553170	2	102,466,	0,3641,
#Partially deleted in new
chr22	31944460	31957603	chr22:31944460-31957603	3	+	31944733	31956792	0	2	360,1465,	0,11678,
#Partially deleted in new
chr22	31944521	31957603	chr22:31944521-31957603	1	+	31944733	31956155	789624	3	299,115,1465,	0,5786,11617,
#Partially deleted in new
chr22	31944521	31956482	chr22:31944521-31956482	0	+	31944733	31945532	789624	3	299,179,344,	0,978,11617,
#Partially deleted in new
chr22	31944746	31956604	chr22:31944746-31956604	0	+	31944746	31944746	8553170	3	74,122,466,	0,810,11392,
#Partially deleted in new
chr22	31944965	31957603	chr22:31944965-31957603	0	+	31944965	31944965	8553170	2	270,1465,	0,11173,
#Partially deleted in new
chr22	31947421	31956576	chr22:31947421-31956576	0	+	31947437	31956576	789624	2	64,438,	0,8717,
#Partially deleted in new
chr22	31963356	31970400	chr22:31963356-31970400	3	+	31963356	31963356	8553170	2	58,415,	0,6629,
#Partially deleted in new
chr22	31970822	31973474	chr22:31970822-31973474	0	+	31970822	31970822	8553170	2	90,88,	0,2564,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	31970860	31973475	chr22:31970860-31973475	3	+	31970860	31970860	8553170	3	52,157,89,	0,1715,2526,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	31981146	31981427	chr22:31981146-31981427	3	-	31981146	31981146	8553170	1	281,	0,
#Deleted in new
chr22	32039489	32039896	chr22:32039489-32039896	7	+	32039489	32039489	16724991	1	407,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr22	32043031	32113029	chr22:32043031-32113029	3	+	32043281	32110213	789624	15	385,72,105,60,105,106,81,221,136,108,151,169,216,106,3040,	0,6911,23903,24935,25464,38834,40042,41407,41868,43188,48580,56151,58990,61754,66958,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr22	32059169	32113002	chr22:32059169-32113002	1	+	32068504	32110213	789624	14	175,105,60,105,106,81,221,136,108,151,169,216,106,3013,	0,7765,8797,9326,22696,23904,25269,25730,27050,32442,40013,42852,45616,50820,
#Partially deleted in new
chr22	32083050	32086326	chr22:32083050-32086326	0	+	32083050	32083050	8553170	4	104,221,136,107,	0,1388,1849,3169,
#Partially deleted in new
chr22	32084848	32102207	chr22:32084848-32102207	0	+	32084848	32084848	8553170	5	187,108,151,169,186,	0,1371,6763,14334,17173,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	32121976	32133469	chr22:32121976-32133469	7	+	32121976	32121976	16724991	4	141,141,287,258,	0,1917,10244,11235,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	32129688	32130612	chr22:32129688-32130612	7	+	32129688	32129688	16724991	2	330,300,	0,624,
#Deleted in new
chr22	32132316	32132507	chr22:32132316-32132507	5	+	32132316	32132316	16724991	1	191,	0,
#Deleted in new
chr22	32134027	32134133	chr22:32134027-32134133	7	+	32134027	32134027	16724991	1	106,	0,
#Deleted in new
chr22	32141266	32143272	chr22:32141266-32143272	3	+	32141266	32141266	8553170	2	73,201,	0,1805,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	32149005	32159288	chr22:32149005-32159288	3	-	32149539	32159215	789624	9	608,28,161,28,65,28,65,75,305,	0,747,1313,1986,2481,3061,3556,5238,9978,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	32149005	32159322	chr22:32149005-32159322	0	-	32149005	32149005	8553170	8	608,28,701,65,28,65,75,339,	0,747,1313,2481,3061,3556,5238,9978,
#Deleted in new
chr22	32149179	32149926	chr22:32149179-32149926	0	-	32149179	32149179	8553170	2	434,174,	0,573,
#Deleted in new
chr22	32159453	32160392	chr22:32159453-32160392	3	-	32159453	32159453	8553170	2	70,492,	0,447,
#Deleted in new
chr22	32188399	32188487	chr22:32188399-32188487	3	-	32188399	32188399	8553170	1	88,	0,
#Partially deleted in new
chr22	32190434	32193479	chr22:32190434-32193479	1	-	32190771	32193274	789624	2	918,578,	0,2467,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	32190434	32202451	chr22:32190434-32202451	1	-	32190771	32202451	789624	4	918,291,146,119,	0,2467,3910,11898,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	32190437	32203477	chr22:32190437-32203477	3	-	32190771	32202451	789624	5	915,291,146,218,837,	0,2464,3907,11895,12203,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	32190437	32202571	chr22:32190437-32202571	0	-	32193080	32202451	789624	3	915,291,239,	0,2464,11895,
#Partially deleted in new
chr22	32190703	32193401	chr22:32190703-32193401	0	-	32190703	32190703	8553170	2	649,500,	0,2198,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	32190705	32202511	chr22:32190705-32202511	0	-	32193080	32202451	789624	4	647,291,54,179,	0,2196,3639,11627,
#Deleted in new
chr22	32199918	32200234	chr22:32199918-32200234	7	+	32199918	32199918	16724991	1	316,	0,
#Partially deleted in new
chr22	32205114	32269666	chr22:32205114-32269666	3	+	32205114	32205114	8553170	4	133,141,292,310,	0,2021,63173,64242,
#Partially deleted in new
chr22	32218475	32255341	chr22:32218475-32255341	3	-	32218513	32255329	789624	15	250,103,216,169,151,108,136,221,81,106,105,60,105,72,147,	0,2444,5791,7179,10718,12492,14423,16397,18768,20509,28935,30267,33294,35666,36719,
#Partially deleted in new
chr22	32269380	32273110	chr22:32269380-32273110	7	+	32269380	32269380	16724991	1	3730,	0,
#Partially deleted in new
chr22	32273419	32277186	chr22:32273419-32277186	3	+	32273419	32273419	8553170	2	88,502,	0,3265,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	32284682	32285131	chr22:32284682-32285131	3	+	32284682	32284682	8553170	1	449,	0,
#Partially deleted in new
chr22	32327170	32343105	chr22:32327170-32343105	3	-	32327170	32327170	8553170	2	267,94,	0,15841,
#Partially deleted in new
chr22	32354884	32361161	chr22:32354884-32361161	3	+	32358158	32360832	789624	3	13,291,910,	0,3269,5367,
#Deleted in new
chr22	32356675	32356988	chr22:32356675-32356988	7	-	32356675	32356675	16724991	1	313,	0,
#Partially deleted in new
chr22	32357866	32361161	chr22:32357866-32361161	1	+	32358071	32360832	789624	2	578,910,	0,2385,
#Partially deleted in new
chr22	32359905	32370985	chr22:32359905-32370985	0	-	32359905	32359905	789624	4	934,25,71,87,	0,7784,8591,10993,
#Partially deleted in new
chr22	32359905	32371076	chr22:32359905-32371076	1	-	32359905	32359905	789624	5	934,87,25,71,178,	0,3066,7784,8591,10993,
#Deleted in new
chr22	32360003	32360436	chr22:32360003-32360436	0	-	32360003	32360003	8553170	1	433,	0,
#Partially deleted in new
chr22	32360651	32363117	chr22:32360651-32363117	0	-	32360651	32360651	8553170	2	188,146,	0,2320,
#Partially deleted in new
chr22	32362800	32370999	chr22:32362800-32370999	0	-	32362800	32362800	8553170	4	258,25,71,101,	0,4889,5696,8098,
#Deleted in new
chr22	32362971	32363059	chr22:32362971-32363059	3	+	32362971	32362971	8553170	1	88,	0,
#Deleted in new
chr22	32368496	32368567	chr22:32368496-32368567	3	+	32368496	32368496	8553170	1	71,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	32376663	32384343	chr22:32376663-32384343	3	+	32376663	32376663	789624	3	58,412,1088,	0,662,6592,
#Deleted in new
chr22	32376681	32377135	chr22:32376681-32377135	7	+	32376681	32376681	16724991	2	40,290,	0,164,
#Partially deleted in new
chr22	32383785	32385631	chr22:32383785-32385631	3	+	32383785	32383785	8553170	2	268,176,	0,1670,
#Deleted in new
chr22	32386667	32386868	chr22:32386667-32386868	7	+	32386667	32386667	16724991	1	201,	0,
#Partially deleted in new
chr22	32387581	32412255	chr22:32387581-32412255	3	-	32387991	32412156	789624	12	518,120,111,189,176,160,157,157,100,68,79,192,	0,4658,6310,7444,8492,10359,12021,14165,19080,20593,21173,24482,
#Partially deleted in new
chr22	32397947	32399985	chr22:32397947-32399985	0	-	32397947	32397947	8553170	2	153,383,	0,1655,
#Partially deleted in new
chr22	32398041	32407526	chr22:32398041-32407526	0	-	32398041	32398041	8553170	5	59,157,157,100,121,	0,1561,3705,8620,9364,
#Partially deleted in new
chr22	32398047	32407409	chr22:32398047-32407409	0	-	32398047	32398047	8553170	5	53,157,157,100,97,	0,1555,3699,8614,9265,
#Partially deleted in new
chr22	32401561	32412241	chr22:32401561-32412241	0	-	32401561	32401561	8553170	5	342,100,68,79,178,	0,5100,6613,7193,10502,
#Partially deleted in new
chr22	32407878	32412248	chr22:32407878-32412248	0	-	32407878	32407878	8553170	3	364,79,185,	0,876,4185,
#Partially deleted in new
chr22	32413846	32457386	chr22:32413846-32457386	1	-	32414302	32457386	789624	15	579,77,64,43,68,171,54,177,92,61,64,156,129,121,124,	0,2068,3238,5515,17500,18526,19872,21857,23913,28824,31788,31994,33365,39536,43416,
#Partially deleted in new
chr22	32413846	32464484	chr22:32413846-32464484	3	-	32414302	32457386	789624	16	579,77,64,43,68,171,54,177,92,61,64,156,129,121,124,111,	0,2068,3238,5515,17500,18526,19872,21857,23913,28824,31788,31994,33365,39536,43416,50527,
#Partially deleted in new
chr22	32413846	32457386	chr22:32413846-32457386	1	-	32414302	32445670	789624	14	579,77,64,43,68,54,177,92,61,64,156,129,121,124,	0,2068,3238,5515,17500,19872,21857,23913,28824,31788,31994,33365,39536,43416,
#Partially deleted in new
chr22	32453333	32464449	chr22:32453333-32464449	1	-	32453378	32457386	789624	4	170,124,88,76,	0,3929,8240,11040,
#Partially deleted in new
chr22	32474675	32498829	chr22:32474675-32498829	3	+	32475002	32498530	0	9	449,295,228,142,84,96,177,38,686,	0,4305,9221,10392,13069,16410,18429,20817,23468,
#Partially deleted in new
chr22	32474675	32498829	chr22:32474675-32498829	0	+	32475002	32483900	789624	8	449,228,142,84,96,177,38,686,	0,9221,10392,13069,16410,18429,20817,23468,
#Partially deleted in new
chr22	32474797	32498829	chr22:32474797-32498829	0	+	32475002	32479160	789624	9	327,143,228,142,84,96,177,38,686,	0,4335,9099,10270,12947,16288,18307,20695,23346,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	32475014	32498829	chr22:32475014-32498829	0	+	32475014	32475014	8553170	7	110,143,228,142,5537,38,686,	0,4118,8882,10053,12730,20478,23129,
#Partially deleted in new
chr22	32475236	32498608	chr22:32475236-32498608	1	+	32475361	32498530	0	9	162,143,228,142,84,96,177,38,465,	0,3896,8660,9831,12508,15849,17868,20256,22907,
#Partially deleted in new
chr22	32475256	32498829	chr22:32475256-32498829	1	+	32479200	32498530	0	9	142,295,228,142,84,96,177,38,686,	0,3724,8640,9811,12488,15829,17848,20236,22887,
#Partially deleted in new
chr22	32475592	32483983	chr22:32475592-32483983	0	+	32479200	32483983	789624	3	365,295,87,	0,3388,8304,
#Partially deleted in new
chr22	32478034	32479231	chr22:32478034-32479231	0	+	32478034	32478034	8553170	2	162,251,	0,946,
#Partially deleted in new
chr22	32487287	32491113	chr22:32487287-32491113	0	+	32487287	32487287	8553170	2	541,28,	0,3798,
#Partially deleted in new
chr22	32512551	33058372	chr22:32512551-33058372	3	-	32513691	33006662	0	14	1273,292,88,135,103,75,143,63,90,160,92,58,473,81,	0,5491,15366,16322,21241,25484,29019,84122,352363,356414,418838,468093,493800,545740,
#Partially deleted in new
chr22	32513575	32529071	chr22:32513575-32529071	0	-	32513575	32513575	8553170	4	249,292,88,198,	0,4467,14342,15298,
#Partially deleted in new
chr22	32513674	32519686	chr22:32513674-32519686	0	-	32513674	32513674	8553170	3	150,292,300,	0,4368,5712,
#Partially deleted in new
chr22	32513691	32541716	chr22:32513691-32541716	1	-	32513691	32541716	789624	7	133,292,88,135,103,75,146,	0,4351,14226,15182,20101,24344,27879,
#Partially deleted in new
chr22	32514438	32529082	chr22:32514438-32529082	0	-	32514438	32514438	8553170	3	212,292,209,	0,3604,14435,
#Partially deleted in new
chr22	32518051	32530202	chr22:32518051-32530202	0	-	32518051	32518051	8553170	3	283,135,156,	0,10822,11995,
#Partially deleted in new
chr22	32518192	32530188	chr22:32518192-32530188	0	-	32518192	32518192	8553170	4	142,88,135,142,	0,9725,10681,11854,
#Partially deleted in new
chr22	32527671	32541716	chr22:32527671-32541716	1	-	32527671	32541716	789624	6	14,88,135,103,75,146,	0,246,1202,6121,10364,13899,
#Partially deleted in new
chr22	32629605	32869100	chr22:32629605-32869100	0	-	32629605	32629605	8553170	3	263,90,135,	0,235309,239360,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	32635101	32635198	chr22:32635101-32635198	7	-	32635101	32635101	16724991	1	97,	0,
#Partially deleted in new
chr22	32783176	32784982	chr22:32783176-32784982	3	+	32783176	32783176	8553170	2	61,86,	0,1720,
#Partially deleted in new
chr22	32801700	32863043	chr22:32801700-32863043	3	+	32802001	32859377	0	5	422,83,112,122,3864,	0,47751,55548,56316,57479,
#Partially deleted in new
chr22	32864574	32869058	chr22:32864574-32869058	0	-	32864574	32864574	8553170	2	430,93,	0,4391,
#Partially deleted in new
chr22	32930994	32947579	chr22:32930994-32947579	0	-	32930994	32930994	8553170	2	487,108,	0,16477,
#Partially deleted in new
chr22	32980644	33057858	chr22:32980644-33057858	0	-	32980644	33006662	789624	3	58,473,324,	0,25707,76890,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	32980672	33014529	chr22:32980672-33014529	0	-	32980672	33006662	789624	3	30,473,129,	0,25679,33728,
#Partially deleted in new
chr22	33014979	33015461	chr22:33014979-33015461	7	+	33014979	33014979	16724991	2	55,210,	0,272,
#Deleted in new
chr22	33105382	33106059	chr22:33105382-33106059	3	-	33105382	33105382	8553170	2	351,86,	0,591,
#Partially deleted in new
chr22	33108528	33116294	chr22:33108528-33116294	3	+	33108528	33108528	789624	4	97,131,235,87,	0,574,1880,7679,
#Deleted in new
chr22	33137139	33137338	chr22:33137139-33137338	7	+	33137139	33137139	16724991	1	199,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	33162225	33384227	chr22:33162225-33384227	0	-	33166762	33384227	789624	6	4607,279,164,156,126,36,	0,142003,153859,175420,219693,221966,
#Partially deleted in new
chr22	33164062	33166439	chr22:33164062-33166439	3	+	33164062	33164062	8553170	2	308,259,	0,2118,
#Partially deleted in new
chr22	33166004	33384227	chr22:33166004-33384227	0	-	33166762	33384227	789624	7	828,147,279,164,156,126,36,	0,117197,138224,150080,171641,215914,218187,
#Partially deleted in new
chr22	33166386	33221751	chr22:33166386-33221751	0	-	33166386	33166386	8553170	2	446,150,	0,55215,
#Partially deleted in new
chr22	33166733	33384227	chr22:33166733-33384227	0	-	33166762	33384227	789624	5	99,164,156,126,36,	0,149351,170912,215185,217458,
#Partially deleted in new
chr22	33272860	33920421	chr22:33272860-33920421	3	-	33274426	33761476	789624	16	1764,196,147,279,164,156,126,113,105,172,124,83,302,188,63,427,	0,4199,10341,31368,43224,64785,109058,111331,159300,291987,331574,353383,377506,488510,583879,647134,
#Partially deleted in new
chr22	33273075	33920428	chr22:33273075-33920428	1	-	33274426	33761476	789624	15	1549,196,147,279,164,156,126,113,105,172,124,83,302,188,434,	0,3984,10126,31153,43009,64570,108843,111116,159085,291772,331359,353168,377291,488295,646919,
#Partially deleted in new
chr22	33273088	33920414	chr22:33273088-33920414	1	-	33274426	33761476	789624	14	1536,196,147,279,164,126,113,105,172,124,83,302,188,420,	0,3971,10113,31140,42996,108830,111103,159072,291759,331346,353155,377278,488282,646906,
#Partially deleted in new
chr22	33320864	33322813	chr22:33320864-33322813	3	+	33320864	33320864	8553170	2	175,309,	0,1640,
#Partially deleted in new
chr22	33337768	33572253	chr22:33337768-33572253	0	-	33337768	33572156	789624	6	33,126,113,105,172,109,	0,44150,46423,94392,227079,234376,
#Deleted in new
chr22	33436581	33436669	chr22:33436581-33436669	3	-	33436581	33436581	5263520	1	88,	0,
#Deleted in new
chr22	33562912	33565019	chr22:33562912-33565019	0	-	33562912	33562912	8553170	2	351,172,	0,1935,
#Partially deleted in new
chr22	33650366	33861624	chr22:33650366-33861624	0	-	33650366	33761476	789624	3	302,188,69,	0,111004,211189,
#Partially deleted in new
chr22	33650367	33922841	chr22:33650367-33922841	0	-	33650367	33761476	789624	4	301,188,63,221,	0,111003,206372,272253,
#Partially deleted in new
chr22	33650374	33657216	chr22:33650374-33657216	0	-	33650374	33650374	8553170	2	294,255,	0,6587,
#Partially deleted in new
chr22	33650439	33922596	chr22:33650439-33922596	0	-	33650439	33650439	8553170	3	229,188,120,	0,110931,272037,
#Partially deleted in new
chr22	33650448	33889228	chr22:33650448-33889228	0	-	33650448	33761476	789624	4	220,188,63,91,	0,110922,206291,238689,
#Partially deleted in new
chr22	33650594	33873405	chr22:33650594-33873405	0	-	33650594	33761476	789624	3	74,188,298,	0,110776,222513,
#Partially deleted in new
chr22	33650631	33873387	chr22:33650631-33873387	0	-	33650631	33761476	789624	4	37,188,63,280,	0,110739,206108,222476,
#Deleted in new
chr22	33704785	33704920	chr22:33704785-33704920	3	-	33704785	33704785	789624	1	135,	0,
#Deleted in new
chr22	33704785	33704922	chr22:33704785-33704922	3	-	33704785	33704785	789624	1	137,	0,
#Deleted in new
chr22	33723831	33724912	chr22:33723831-33724912	3	-	33723831	33723831	8553170	2	448,110,	0,971,
#Partially deleted in new
chr22	33725013	33737775	chr22:33725013-33737775	0	+	33725013	33725013	8553170	6	88,145,82,98,1430,212,	0,598,1102,2477,7242,12550,
#Partially deleted in new
chr22	33725026	33750843	chr22:33725026-33750843	3	+	33725026	33725026	789624	7	75,145,142,220,200,43,240,	0,585,2464,12537,19102,21388,25577,
#Partially deleted in new
chr22	33725039	33750742	chr22:33725039-33750742	1	+	33725039	33725039	789624	10	62,145,82,142,1430,220,200,43,155,139,	0,572,1076,2451,7216,12524,19089,21375,22630,25564,
#Partially deleted in new
chr22	33725068	33732502	chr22:33725068-33732502	0	+	33725068	33725068	8553170	4	33,145,142,247,	0,543,2422,7187,
#Partially deleted in new
chr22	33744008	33750657	chr22:33744008-33750657	0	+	33744008	33744008	8553170	4	320,43,155,54,	0,2406,3661,6595,
#Partially deleted in new
chr22	33744128	33750683	chr22:33744128-33750683	0	+	33744128	33744128	8553170	3	200,155,80,	0,3541,6475,
#Deleted in new
chr22	33922421	33922766	chr22:33922421-33922766	3	+	33922421	33922421	8553170	1	345,	0,
#Partially deleted in new
chr22	34017472	34188425	chr22:34017472-34188425	3	+	34017472	34017472	8553170	8	55,59,84,63,196,66,138,96,	0,66496,82885,134392,144123,154240,156837,170857,
#Partially deleted in new
chr22	34208140	34209262	chr22:34208140-34209262	3	-	34208140	34208140	8553170	2	448,71,	0,1051,
#Deleted in new
chr22	34589084	34591278	chr22:34589084-34591278	7	-	34589084	34589084	16724991	1	2194,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	34641178	34651862	chr22:34641178-34651862	3	+	34641178	34641178	8553170	1	10684,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	34703125	34704885	chr22:34703125-34704885	3	-	34703125	34703125	8553170	3	298,293,177,	0,945,1583,
#Partially deleted in new
chr22	34711907	34724919	chr22:34711907-34724919	3	-	34711907	34711907	8553170	4	196,177,112,64,	0,813,1954,12948,
#Partially deleted in new
chr22	34997718	35002862	chr22:34997718-35002862	3	-	34997718	34997718	8553170	2	140,62,	0,5082,
#Partially deleted in new
chr22	35066135	35087387	chr22:35066135-35087387	3	+	35067087	35085693	789624	4	1181,152,117,1934,	0,16382,18247,19318,
#Partially deleted in new
chr22	35066135	35087386	chr22:35066135-35087386	1	+	35067087	35085693	789624	5	327,565,152,117,1933,	0,616,16382,18247,19318,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	35119823	35231056	chr22:35119823-35231056	7	-	35119823	35119823	16724991	6	81,55,168,122,163,59,	0,189,51611,52515,75033,111174,
#Partially deleted in new
chr22	35122660	35127419	chr22:35122660-35127419	3	+	35122660	35122660	8553170	2	86,278,	0,4481,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	35164303	35165347	chr22:35164303-35165347	7	+	35164303	35164303	16724991	2	178,202,	0,842,
#Deleted in new
chr22	35194698	35194942	chr22:35194698-35194942	5	-	35194698	35194698	16724991	1	244,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	35249771	35249833	chr22:35249771-35249833	3	+	35249771	35249771	8553170	1	62,	0,
#Partially deleted in new
chr22	35257451	35265570	chr22:35257451-35265570	0	+	35264715	35265570	789624	4	106,149,79,923,	0,5626,6344,7196,
#Partially deleted in new
chr22	35257486	35295807	chr22:35257486-35295807	0	+	35262390	35264001	789624	12	71,99,149,79,115,956,82,65,106,170,123,2201,	0,4836,5591,6309,6495,7161,26475,28510,29860,30751,35505,36120,
#Partially deleted in new
chr22	35257488	35258588	chr22:35257488-35258588	0	+	35257488	35257488	8553170	2	69,506,	0,594,
#Partially deleted in new
chr22	35257495	35265567	chr22:35257495-35265567	0	+	35264715	35265567	789624	5	62,149,79,115,920,	0,5582,6300,6486,7152,
#Partially deleted in new
chr22	35257497	35295764	chr22:35257497-35295764	3	+	35262390	35293651	789624	11	60,99,149,79,956,82,65,106,170,123,2158,	0,4825,5580,6298,7150,26464,28499,29849,30740,35494,36109,
#Partially deleted in new
chr22	35261853	35264052	chr22:35261853-35264052	0	+	35261853	35261853	8553170	4	568,149,79,71,	0,1224,1942,2128,
#Partially deleted in new
chr22	35262762	35264663	chr22:35262762-35264663	0	+	35262762	35262762	8553170	3	464,79,16,	0,1033,1885,
#Partially deleted in new
chr22	35286881	35293028	chr22:35286881-35293028	0	+	35286881	35286881	8553170	3	571,170,37,	0,1356,6110,
#Deleted in new
chr22	35298837	35299541	chr22:35298837-35299541	3	-	35298837	35298837	8553170	2	297,88,	0,616,
#Partially deleted in new
chr22	35299274	35347992	chr22:35299274-35347992	1	+	35317923	35347209	0	15	104,85,79,150,135,147,117,134,34,94,121,76,60,43,938,	0,18602,22684,23753,24221,24493,27996,31072,33706,34129,35053,39438,46450,47655,47780,
#Partially deleted in new
chr22	35299274	35323630	chr22:35299274-35323630	0	+	35317923	35323630	789624	5	104,85,79,150,135,	0,18602,22684,23753,24221,
#Partially deleted in new
chr22	35299375	35323603	chr22:35299375-35323603	0	+	35317923	35323603	789624	5	119,85,79,150,108,	0,18501,22583,23652,24120,
#Partially deleted in new
chr22	35299799	35333492	chr22:35299799-35333492	0	+	35299928	35333492	789624	10	181,85,61,150,135,147,117,134,34,89,	0,18077,22159,23228,23696,23968,27471,30547,33181,33604,
#Partially deleted in new
chr22	35299803	35347992	chr22:35299803-35347992	1	+	35299928	35347209	0	15	177,85,79,150,135,147,117,134,34,94,121,76,60,43,938,	0,18073,22155,23224,23692,23964,27467,30543,33177,33600,34524,38909,45921,47126,47251,
#Partially deleted in new
chr22	35299803	35347992	chr22:35299803-35347992	1	+	35299928	35347209	0	14	177,85,79,150,147,117,134,34,94,121,76,60,40,938,	0,18073,22155,23224,23964,27467,30543,33177,33600,34524,38909,45921,47126,47251,
#Partially deleted in new
chr22	35299803	35347994	chr22:35299803-35347994	3	+	35299928	35347209	0	15	177,85,79,150,135,147,117,134,34,94,121,76,60,40,940,	0,18073,22155,23224,23692,23964,27467,30543,33177,33600,34524,38909,45921,47126,47251,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr22	35299855	35347973	chr22:35299855-35347973	0	+	35299928	35321814	789624	17	125,85,106,79,150,135,147,117,134,200,34,94,121,76,60,40,919,	0,18021,21886,22103,23172,23640,23912,27415,30491,31440,33125,33548,34472,38857,45869,47074,47199,
#Partially deleted in new
chr22	35299865	35318316	chr22:35299865-35318316	0	+	35299865	35299865	8553170	2	115,440,	0,18011,
#Partially deleted in new
chr22	35299868	35347972	chr22:35299868-35347972	1	+	35299928	35323897	789624	10	112,85,79,150,126,8,147,117,42,434,	0,18008,22090,23159,23627,23754,23899,27402,30478,47670,
#Partially deleted in new
chr22	35299870	35322612	chr22:35299870-35322612	0	+	35299870	35299870	8553170	3	110,85,654,	0,18006,22088,
#Partially deleted in new
chr22	35299873	35327338	chr22:35299873-35327338	0	+	35299928	35323034	789624	7	107,85,79,179,135,147,68,	0,18003,22085,23125,23622,23894,27397,
#Partially deleted in new
chr22	35299883	35347981	chr22:35299883-35347981	0	+	35299928	35321984	789624	14	97,79,150,135,147,117,134,34,94,121,76,60,40,927,	0,22075,23144,23612,23884,27387,30463,33097,33520,34444,38829,45841,47046,47171,
#Partially deleted in new
chr22	35299889	35323810	chr22:35299889-35323810	0	+	35299928	35323554	789624	6	91,85,79,150,112,43,	0,17987,22069,23138,23629,23878,
#Partially deleted in new
chr22	35299893	35323874	chr22:35299893-35323874	0	+	35299928	35323155	789624	5	87,85,179,135,107,	0,17983,23105,23602,23874,
#Partially deleted in new
chr22	35311061	35323819	chr22:35311061-35323819	0	+	35317923	35323819	789624	6	66,85,79,150,135,52,	0,6815,10897,11966,12434,12706,
#Deleted in new
chr22	35323339	35323914	chr22:35323339-35323914	0	+	35323339	35323339	8553170	2	291,147,	0,428,
#Partially deleted in new
chr22	35323867	35338788	chr22:35323867-35338788	0	+	35323867	35323867	8553170	7	47,117,134,34,323,121,76,	0,3403,6479,9113,9307,10460,14845,
#Deleted in new
chr22	35335639	35335758	chr22:35335639-35335758	3	+	35335639	35335639	5263520	1	119,	0,
#Deleted in new
chr22	35336720	35336799	chr22:35336720-35336799	3	-	35336720	35336720	5263520	1	79,	0,
#Deleted in new
chr22	35344185	35347983	chr22:35344185-35347983	0	+	35344185	35344185	8553170	3	1599,40,929,	0,2744,2869,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	35372173	35372621	chr22:35372173-35372621	3	+	35372173	35372173	8553170	1	448,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	35376421	35377261	chr22:35376421-35377261	3	+	35376421	35376421	8553170	1	840,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	35380360	35387101	chr22:35380360-35387101	0	+	35381173	35387101	789624	4	120,263,121,417,	0,573,2745,6324,
#Partially deleted in new
chr22	35380834	35394214	chr22:35380834-35394214	3	+	35381173	35393598	0	5	362,121,492,100,747,	0,2271,5850,9029,12633,
#Partially deleted in new
chr22	35381092	35386908	chr22:35381092-35386908	0	+	35381092	35381092	8553170	3	237,121,224,	0,2013,5592,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	35387039	35390293	chr22:35387039-35390293	0	+	35387039	35387039	8553170	2	137,430,	0,2824,
#Partially deleted in new
chr22	35400062	35425430	chr22:35400062-35425430	3	+	35400438	35424255	789624	17	146,175,127,129,173,156,167,172,112,144,66,177,113,129,143,128,1277,	0,368,3144,3351,6490,8345,10681,12447,13812,15766,16276,16575,17681,19821,21255,23151,24091,
#Partially deleted in new
chr22	35400133	35403257	chr22:35400133-35403257	0	+	35400438	35401672	789624	4	75,175,149,51,	0,297,1532,3073,
#Partially deleted in new
chr22	35400136	35424501	chr22:35400136-35424501	1	+	35400438	35424255	789624	16	72,175,127,173,156,167,172,112,144,66,177,113,129,143,128,348,	0,294,3070,6416,8271,10607,12373,13738,15692,16202,16501,17607,19747,21181,23077,24017,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	35400141	35410008	chr22:35400141-35410008	0	+	35400141	35400141	8553170	2	26,531,	0,9336,
#Partially deleted in new
chr22	35400169	35406725	chr22:35400169-35406725	0	+	35400438	35406725	789624	6	39,175,96,127,129,173,	0,261,1201,3037,3244,6383,
#Partially deleted in new
chr22	35400430	35410872	chr22:35400430-35410872	0	+	35406558	35410872	789624	5	68,25,173,156,129,	0,3087,6122,7977,10313,
#Partially deleted in new
chr22	35410358	35415908	chr22:35410358-35415908	0	+	35410358	35410358	8553170	5	23,167,172,112,80,	0,385,2151,3516,5470,
#Partially deleted in new
chr22	35410408	35424501	chr22:35410408-35424501	0	+	35410408	35410408	8553170	9	502,172,112,144,66,177,113,129,3184,	0,2101,3466,5420,5930,6229,7335,9475,10909,
#Partially deleted in new
chr22	35411243	35415965	chr22:35411243-35415965	0	+	35411243	35411243	8553170	4	47,172,112,137,	0,1266,2631,4585,
#Partially deleted in new
chr22	35411438	35416672	chr22:35411438-35416672	0	+	35411438	35411438	8553170	6	58,172,112,144,66,35,	0,1071,2436,4390,4900,5199,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	35501860	35503586	chr22:35501860-35503586	7	-	35501860	35501860	16724991	1	1726,	0,
#Partially deleted in new
chr22	35526931	35527415	chr22:35526931-35527415	3	+	35526931	35526931	8553170	1	484,	0,
#Partially deleted in new
chr22	35540867	35554001	chr22:35540867-35554001	3	+	35546809	35552032	789624	3	633,280,2499,	0,5933,10635,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	35606763	35623354	chr22:35606763-35623354	3	-	35607296	35617257	0	4	680,223,103,164,	0,4120,10399,16427,
#Partially deleted in new
chr22	35606763	35617456	chr22:35606763-35617456	1	-	35607296	35617257	0	3	680,223,294,	0,4120,10399,
#Partially deleted in new
chr22	35606763	35617508	chr22:35606763-35617508	1	-	35607296	35617257	0	4	680,223,103,147,	0,4120,10399,10598,
#Partially deleted in new
chr22	35606763	35615713	chr22:35606763-35615713	1	-	35607296	35611036	789624	3	680,223,140,	0,4120,8810,
#Partially deleted in new
chr22	35607271	35622561	chr22:35607271-35622561	1	-	35607296	35617257	0	4	172,223,103,84,	0,3612,9891,15206,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	35607332	35623401	chr22:35607332-35623401	0	-	35607332	35617257	789624	4	111,223,103,211,	0,3551,9830,15858,
#Partially deleted in new
chr22	35607374	35617329	chr22:35607374-35617329	0	-	35607374	35611036	789624	3	69,223,253,	0,3509,9702,
#Partially deleted in new
chr22	35610883	35637951	chr22:35610883-35637951	0	-	35610883	35617257	789624	4	223,103,103,86,	0,6279,26222,26982,
#Partially deleted in new
chr22	35610883	35617586	chr22:35610883-35617586	0	-	35610883	35617257	789624	3	223,103,225,	0,6279,6478,
#Partially deleted in new
chr22	35610969	35622524	chr22:35610969-35622524	0	-	35610969	35617257	789624	4	137,103,131,47,	0,6193,10996,11508,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	35626987	35635134	chr22:35626987-35635134	3	-	35626987	35626987	8553170	2	672,180,	0,7967,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	35648394	35668409	chr22:35648394-35668409	3	+	35656425	35659596	789624	3	229,97,9795,	0,7984,10220,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	35685939	35689373	chr22:35685939-35689373	3	+	35685939	35685939	8553170	2	75,526,	0,2908,
#Deleted in new
chr22	35703802	35704176	chr22:35703802-35704176	7	+	35703802	35703802	16724991	1	374,	0,
#Partially deleted in new
chr22	35717871	35729483	chr22:35717871-35729483	3	+	35717871	35728898	789624	5	55,87,984,182,130,	0,2696,8339,10851,11482,
#Partially deleted in new
chr22	35738735	35840587	chr22:35738735-35840587	1	-	35744194	35840218	789624	12	5514,73,89,133,93,54,61,93,54,147,225,396,	0,7187,7737,21152,22466,22679,26687,29521,39289,42864,71044,101456,
#Partially deleted in new
chr22	35743601	35840218	chr22:35743601-35840218	1	-	35744194	35840218	789624	12	648,73,89,145,93,54,61,93,54,144,225,27,	0,2321,2871,16286,17600,17813,21821,24655,34423,37998,66178,96590,
#Partially deleted in new
chr22	35743601	35840407	chr22:35743601-35840407	1	-	35744204	35840218	789624	13	648,73,89,40,145,93,54,61,93,54,144,225,216,	0,2321,2871,12503,16286,17600,17813,21821,24655,34423,37998,66178,96590,
#Partially deleted in new
chr22	35743932	35840407	chr22:35743932-35840407	1	-	35744204	35840218	789624	12	317,73,89,40,133,93,54,61,93,144,225,216,	0,1990,2540,12172,15955,17269,17482,21490,24324,37667,65847,96259,
#Partially deleted in new
chr22	35743957	35810004	chr22:35743957-35810004	1	-	35744204	35809971	789624	12	292,73,89,40,133,93,54,61,93,54,147,225,	0,1965,2515,12147,15930,17244,17457,21465,24299,34067,37642,65822,
#Partially deleted in new
chr22	35743982	35938897	chr22:35743982-35938897	1	-	35744194	35809971	789624	14	267,73,89,32,40,133,93,54,61,93,54,144,225,51,	0,1940,2490,6443,12122,15905,17219,17432,21440,24274,34042,37617,65797,194864,
#Deleted in new
chr22	35744086	35748632	chr22:35744086-35748632	0	-	35744086	35744086	8553170	3	163,73,2160,	0,1836,2386,
#Partially deleted in new
chr22	35744147	35840284	chr22:35744147-35840284	1	-	35744204	35840218	789624	13	102,73,89,40,133,93,54,61,93,54,144,225,93,	0,1775,2325,11957,15740,17054,17267,21275,24109,33877,37452,65632,96044,
#Partially deleted in new
chr22	35744163	35778032	chr22:35744163-35778032	0	-	35744204	35778032	789624	10	86,73,89,43,133,93,54,61,93,8,	0,1759,2309,8449,15724,17038,17251,21259,24093,33861,
#Partially deleted in new
chr22	35744204	36028425	chr22:35744204-36028425	3	-	35744204	36028425	789624	14	45,73,89,40,145,93,54,61,93,54,147,225,51,186,	0,1718,2268,11900,15683,16997,17210,21218,24052,33820,37395,65575,194642,284035,
#Partially deleted in new
chr22	35760009	35824373	chr22:35760009-35824373	0	-	35760009	35809971	789624	9	11,93,54,61,93,54,144,225,54,	0,1192,1405,5413,8247,18015,21590,49770,64310,
#Partially deleted in new
chr22	35768267	35961666	chr22:35768267-35961666	0	-	35768267	35961604	789624	6	82,54,147,225,51,104,	0,9757,13332,41512,170579,193295,
#Partially deleted in new
chr22	35777655	35840403	chr22:35777655-35840403	0	-	35777655	35777655	8553170	4	423,144,225,212,	0,3944,32124,62536,
#Partially deleted in new
chr22	35778027	35840413	chr22:35778027-35840413	0	-	35778027	35809971	789624	5	48,144,225,120,222,	0,3572,31752,58292,62164,
#Deleted in new
chr22	35897269	35898404	chr22:35897269-35898404	7	-	35897269	35897269	16724991	1	1135,	0,
#Duplicated in new
chr22	35992320	36000469	chr22:35992320-36000469	3	+	35992320	35992320	8553170	1	8149,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	36066532	36070110	chr22:36066532-36070110	3	+	36066532	36066532	8553170	1	3578,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	36070999	36085573	chr22:36070999-36085573	3	+	36070999	36070999	8553170	1	14574,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	36091147	36093352	chr22:36091147-36093352	3	+	36091147	36091147	8553170	1	2205,	0,
#Partially deleted in new
chr22	36137429	36139350	chr22:36137429-36139350	3	-	36137429	36137429	8553170	1	1921,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	36140329	36160929	chr22:36140329-36160929	3	-	36141199	36160891	789624	3	1729,127,261,	0,5143,20339,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	36140329	36166177	chr22:36140329-36166177	1	-	36141199	36141808	789624	4	1729,127,121,1586,	0,5143,20339,24262,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	36140329	36166177	chr22:36140329-36166177	1	-	36141199	36141808	789624	5	1729,127,121,63,1586,	0,5143,20339,21154,24262,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	36140329	36160929	chr22:36140329-36160929	0	-	36149071	36160891	789624	4	1729,127,97,261,	0,5143,8716,20339,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	36140329	36160929	chr22:36140329-36160929	1	-	36141199	36141808	789624	4	1729,127,97,261,	0,5143,8716,20339,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	36140329	36160929	chr22:36140329-36160929	0	-	36149345	36160891	789624	5	1729,127,97,113,261,	0,5143,8716,8929,20339,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	36140329	36160929	chr22:36140329-36160929	0	-	36149345	36160891	789624	4	1729,127,326,261,	0,5143,8716,20339,
#Partially deleted in new
chr22	36141026	36149126	chr22:36141026-36149126	1	-	36141199	36149055	789624	3	1032,127,81,	0,4446,8019,
#Partially deleted in new
chr22	36141527	36160755	chr22:36141527-36160755	0	-	36156992	36160755	789624	5	531,127,97,163,87,	0,3945,7518,15316,19141,
#Partially deleted in new
chr22	36141702	36156936	chr22:36141702-36156936	0	-	36141702	36141702	8553170	3	356,127,93,	0,3770,15141,
#Partially deleted in new
chr22	36141715	36160754	chr22:36141715-36160754	0	-	36149071	36160754	789624	5	343,27,23,97,86,	0,3757,3861,7330,18953,
#Partially deleted in new
chr22	36141862	36156949	chr22:36141862-36156949	0	-	36141862	36141862	8553170	4	196,127,140,106,	0,3610,7183,14981,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	36145482	36160754	chr22:36145482-36160754	0	-	36149071	36160754	789624	4	117,269,97,86,	0,657,3563,15186,
#Partially deleted in new
chr22	36145488	36160755	chr22:36145488-36160755	0	-	36153391	36160755	789624	5	111,97,113,139,87,	0,3557,3770,7796,15180,
#Partially deleted in new
chr22	36145506	36156885	chr22:36145506-36156885	0	-	36145506	36145506	8553170	3	93,97,137,	0,3539,11242,
#Partially deleted in new
chr22	36145543	36156938	chr22:36145543-36156938	0	-	36145543	36145543	8553170	3	56,326,95,	0,3502,11300,
#Partially deleted in new
chr22	36146258	36160755	chr22:36146258-36160755	0	-	36149345	36160755	789624	3	150,326,87,	0,2787,14410,
#Partially deleted in new
chr22	36149074	36160755	chr22:36149074-36160755	0	-	36149791	36160755	789624	4	68,113,194,87,	0,184,696,11594,
#Partially deleted in new
chr22	36154448	36160783	chr22:36154448-36160783	0	-	36154620	36160783	789624	2	180,115,	0,6220,
#Partially deleted in new
chr22	36155719	36156886	chr22:36155719-36156886	0	-	36155719	36155719	8553170	2	318,43,	0,1124,
#Partially deleted in new
chr22	36159229	36160755	chr22:36159229-36160755	0	-	36159229	36159229	8553170	2	451,87,	0,1439,
#Deleted in new
chr22	36172421	36172779	chr22:36172421-36172779	7	+	36172421	36172421	16724991	1	358,	0,
#Partially deleted in new
chr22	36172933	36173948	chr22:36172933-36173948	7	+	36172933	36172933	16724991	2	96,577,	0,438,
#Deleted in new
chr22	36174260	36174822	chr22:36174260-36174822	7	+	36174260	36174260	16724991	1	562,	0,
#Deleted in new
chr22	36175166	36175854	chr22:36175166-36175854	7	+	36175166	36175166	16724991	1	688,	0,
#Deleted in new
chr22	36175856	36176526	chr22:36175856-36176526	7	+	36175856	36175856	16724991	1	670,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	36178553	36179385	chr22:36178553-36179385	7	+	36178553	36178553	16724991	1	832,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	36189123	36204806	chr22:36189123-36204806	0	-	36189123	36189123	8553170	4	2789,127,47,179,	0,6187,10206,15504,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	36189128	36204833	chr22:36189128-36204833	3	-	36191074	36202036	789624	5	2784,127,47,63,206,	0,6182,10201,12864,15499,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	36189128	36204840	chr22:36189128-36204840	1	-	36191074	36201734	789624	6	2784,127,47,189,63,213,	0,6182,10201,12571,12864,15499,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	36190796	36204806	chr22:36190796-36204806	1	-	36191074	36201734	789624	5	1116,127,47,356,179,	0,4514,8533,10903,13831,
#Partially deleted in new
chr22	36191258	36204808	chr22:36191258-36204808	0	-	36191258	36191258	8553170	4	654,127,90,181,	0,4052,8071,13369,
#Partially deleted in new
chr22	36191864	36201877	chr22:36191864-36201877	0	-	36195306	36201734	789624	4	48,343,47,178,	0,3230,7465,9835,
#Partially deleted in new
chr22	36191905	36204806	chr22:36191905-36204806	0	-	36191905	36201734	789624	6	7,127,47,97,63,179,	0,3405,7424,9794,10087,12722,
#Partially deleted in new
chr22	36195325	36204806	chr22:36195325-36204806	0	-	36195325	36201734	789624	5	112,47,142,63,179,	0,4004,6374,6667,9302,
#Partially deleted in new
chr22	36197454	36204743	chr22:36197454-36204743	1	-	36197642	36201734	789624	6	377,47,53,189,63,116,	0,1875,2101,4245,4538,7173,
#Partially deleted in new
chr22	36197455	36204743	chr22:36197455-36204743	1	-	36197642	36201734	789624	6	376,46,54,189,63,116,	0,1874,2099,4244,4537,7172,
#Partially deleted in new
chr22	36199334	36204806	chr22:36199334-36204806	0	-	36199334	36201734	789624	4	42,189,102,179,	0,2365,2658,5293,
#Partially deleted in new
chr22	36201583	36204715	chr22:36201583-36204715	0	-	36201583	36201583	8553170	2	472,88,	0,3044,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	36226202	36239643	chr22:36226202-36239643	1	-	36227403	36233162	789624	5	2078,127,89,54,203,	0,5137,6950,7199,13238,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	36226209	36239954	chr22:36226209-36239954	3	-	36227403	36233162	789624	6	2071,127,89,54,121,223,	0,5130,6943,7192,13231,13522,
#Partially deleted in new
chr22	36227341	36239527	chr22:36227341-36239527	1	-	36227403	36239518	789624	6	939,127,89,54,125,87,	0,3998,5811,6060,9719,12099,
#Partially deleted in new
chr22	36228031	36239227	chr22:36228031-36239227	0	-	36228031	36233162	789624	5	249,127,89,54,92,	0,3308,5121,5370,11104,
#Partially deleted in new
chr22	36228194	36239561	chr22:36228194-36239561	0	-	36228194	36233162	789624	6	86,127,89,54,100,121,	0,3145,4958,5207,6041,11246,
#Partially deleted in new
chr22	36236884	36239239	chr22:36236884-36239239	0	-	36236884	36236884	8553170	2	479,104,	0,2251,
#Partially deleted in new
chr22	36236926	36239582	chr22:36236926-36239582	0	-	36236926	36236926	8553170	2	437,142,	0,2514,
#Partially deleted in new
chr22	36236932	36239673	chr22:36236932-36239673	0	-	36236932	36236932	8553170	3	431,121,27,	0,2508,2714,
#Partially deleted in new
chr22	36236963	36239570	chr22:36236963-36239570	0	-	36236963	36236963	8553170	2	397,130,	0,2477,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	36253009	36267525	chr22:36253009-36267525	1	+	36254955	36266033	789624	6	210,63,54,89,127,2375,	0,1927,4073,4309,8586,12141,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	36253070	36267530	chr22:36253070-36267530	1	+	36254955	36266033	789624	6	149,102,54,89,127,2380,	0,1827,4012,4248,8525,12080,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	36253070	36267530	chr22:36253070-36267530	3	+	36254955	36266033	789624	5	149,63,89,127,2380,	0,1866,4248,8525,12080,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	36253077	36267521	chr22:36253077-36267521	1	+	36253962	36266033	789624	7	142,154,63,54,89,127,2371,	0,760,1859,4005,4241,8518,12073,
#Partially deleted in new
chr22	36253130	36261673	chr22:36253130-36261673	0	+	36254955	36261646	789624	6	89,63,54,89,188,78,	0,1806,3952,4188,6538,8465,
#Partially deleted in new
chr22	36253132	36265315	chr22:36253132-36265315	0	+	36254955	36265315	789624	6	87,102,54,89,127,165,	0,1765,3950,4186,8463,12018,
#Partially deleted in new
chr22	36253132	36261675	chr22:36253132-36261675	0	+	36253962	36261675	789624	6	87,154,102,54,89,80,	0,705,1765,3950,4186,8463,
#Partially deleted in new
chr22	36253132	36261699	chr22:36253132-36261699	0	+	36254955	36261646	789624	5	87,63,89,188,104,	0,1804,4186,6536,8463,
#Partially deleted in new
chr22	36253132	36257560	chr22:36253132-36257560	0	+	36253132	36253132	8553170	5	87,154,63,54,242,	0,705,1804,3950,4186,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	36253140	36267083	chr22:36253140-36267083	1	+	36254955	36266033	789624	7	79,63,54,89,127,957,195,	0,1796,3942,4178,8455,12010,13748,
#Partially deleted in new
chr22	36253160	36261644	chr22:36253160-36261644	0	+	36254955	36261644	789624	6	59,102,54,89,188,49,	0,1737,3922,4158,6508,8435,
#Partially deleted in new
chr22	36253163	36261633	chr22:36253163-36261633	0	+	36254955	36259910	789624	6	56,63,54,89,250,38,	0,1773,3919,4155,6505,8432,
#Partially deleted in new
chr22	36281276	36388067	chr22:36281276-36388067	3	-	36282667	36349236	0	41	1509,173,109,209,124,89,129,162,213,213,249,153,105,207,145,213,172,124,138,207,132,109,161,70,122,194,115,174,174,153,119,96,144,99,64,93,94,28,157,352,261,	0,2816,3126,3844,4381,4588,5441,6975,7450,7808,10709,12052,12482,12815,13655,14228,15566,17642,18850,19574,20257,21291,22718,23756,24653,25137,28005,30772,32868,35240,36930,38263,38943,39521,40481,41152,45291,46184,60093,67627,106530,
#Deleted in new
chr22	36284161	36286044	chr22:36284161-36286044	0	-	36284161	36284161	8553170	5	146,109,209,124,180,	0,241,959,1496,1703,
#Deleted in new
chr22	36284213	36286021	chr22:36284213-36286021	0	-	36284213	36284213	8553170	4	298,209,124,157,	0,907,1444,1651,
#Deleted in new
chr22	36286846	36286907	chr22:36286846-36286907	3	-	36286846	36286846	5263520	1	61,	0,
#Partially deleted in new
chr22	36295511	36297323	chr22:36295511-36297323	0	-	36295511	36295511	8553170	2	206,481,	0,1331,
#Deleted in new
chr22	36300909	36301714	chr22:36300909-36301714	0	-	36300909	36300909	8553170	2	148,181,	0,624,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	36302307	36304025	chr22:36302307-36304025	0	-	36302307	36302307	8553170	2	369,31,	0,1687,
#Partially deleted in new
chr22	36316512	36319835	chr22:36316512-36319835	0	-	36316512	36316512	8553170	3	157,119,296,	0,1694,3027,
#Partially deleted in new
chr22	36320240	36321922	chr22:36320240-36321922	0	-	36320240	36320240	8553170	3	123,99,165,	0,557,1517,
#Partially deleted in new
chr22	36320273	36328952	chr22:36320273-36328952	0	-	36320273	36320273	8553170	7	90,99,64,93,94,28,94,	0,524,1484,2155,6294,7187,8585,
#Partially deleted in new
chr22	36325032	36365112	chr22:36325032-36365112	1	-	36325078	36349236	789624	6	91,94,28,157,352,67,	0,1535,2428,16337,23871,40013,
#Partially deleted in new
chr22	36348927	36365111	chr22:36348927-36365111	0	-	36348927	36349236	789624	3	328,55,66,	0,15851,16118,
#Partially deleted in new
chr22	36388625	36396517	chr22:36388625-36396517	3	+	36388625	36388625	8553170	2	110,400,	0,7492,
#Deleted in new
chr22	36421272	36421644	chr22:36421272-36421644	7	-	36421272	36421272	16724991	1	372,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	36440879	36440970	chr22:36440879-36440970	3	-	36440879	36440879	8553170	1	91,	0,
#Partially deleted in new
chr22	36445394	36454944	chr22:36445394-36454944	3	-	36445394	36445394	8553170	2	210,162,	0,9388,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	36467035	36482030	chr22:36467035-36482030	3	-	36467803	36480837	0	4	882,124,263,467,	0,9697,13539,14528,
#Partially deleted in new
chr22	36467045	36481634	chr22:36467045-36481634	1	-	36467803	36476813	789624	4	872,124,213,71,	0,9687,13529,14518,
#Partially deleted in new
chr22	36467548	36481632	chr22:36467548-36481632	0	-	36467548	36467548	8553170	4	369,124,174,69,	0,9184,13026,14015,
#Partially deleted in new
chr22	36467590	36481340	chr22:36467590-36481340	1	-	36467803	36480837	0	4	327,124,263,198,	0,9142,12984,13552,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	36487189	36507101	chr22:36487189-36507101	3	-	36490007	36506422	789624	9	3078,171,242,166,167,270,252,528,93,	0,6443,8777,10801,14051,16908,17325,18706,19819,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	36488241	36507022	chr22:36488241-36507022	1	-	36490007	36506422	789624	9	2026,171,242,166,167,270,252,528,111,	0,5391,7725,9749,12999,15856,16273,17654,18670,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	36488598	36498397	chr22:36488598-36498397	0	-	36488598	36488598	8553170	4	1669,171,242,407,	0,5034,7368,9392,
#Partially deleted in new
chr22	36489986	36506530	chr22:36489986-36506530	1	-	36490007	36506422	789624	8	281,171,242,166,167,270,252,635,	0,3646,5980,8004,11254,14111,14528,15909,
#Deleted in new
chr22	36506163	36507043	chr22:36506163-36507043	0	-	36506163	36506422	789624	2	532,35,	0,845,
#Partially deleted in new
chr22	36510849	36529436	chr22:36510849-36529436	3	-	36510986	36526121	789624	15	151,284,143,130,86,131,148,133,113,73,86,137,46,133,361,	0,653,1610,5628,5855,6451,7913,8555,9726,12359,13045,13746,14814,15149,18226,
#Deleted in new
chr22	36510855	36511641	chr22:36510855-36511641	0	-	36511157	36511641	789624	2	313,139,	0,647,
#Partially deleted in new
chr22	36510867	36512929	chr22:36510867-36512929	0	-	36510867	36510867	8553170	3	133,284,470,	0,635,1592,
#Partially deleted in new
chr22	36510898	36528897	chr22:36510898-36528897	1	-	36510986	36526121	789624	15	102,284,143,130,86,131,148,133,113,73,86,137,46,133,106,	0,604,1561,5579,5806,6402,7864,8506,9677,12310,12996,13697,14765,15100,17893,
#Partially deleted in new
chr22	36511576	36516931	chr22:36511576-36516931	0	-	36511576	36511576	8553170	4	210,143,130,227,	0,883,4901,5128,
#Partially deleted in new
chr22	36511700	36519501	chr22:36511700-36519501	0	-	36517422	36519501	789624	7	86,143,130,86,193,148,97,	0,759,4777,5004,5600,7062,7704,
#Deleted in new
chr22	36516062	36516923	chr22:36516062-36516923	0	-	36516062	36516062	8553170	2	545,219,	0,642,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	36518812	36529166	chr22:36518812-36529166	0	-	36518812	36526121	789624	10	98,133,113,73,86,137,46,133,86,91,	0,592,1763,4396,5082,5783,6851,7186,8007,10263,
#Partially deleted in new
chr22	36520632	36529077	chr22:36520632-36529077	0	-	36520632	36526121	789624	7	56,73,86,137,46,133,198,	0,2576,3262,3963,5031,5366,8247,
#Partially deleted in new
chr22	36523114	36529184	chr22:36523114-36529184	0	-	36523114	36523114	8553170	6	167,86,137,46,133,109,	0,780,1481,2549,2884,5961,
#Partially deleted in new
chr22	36523915	36528942	chr22:36523915-36528942	0	-	36523915	36526121	789624	5	65,137,46,133,200,	0,680,1748,2083,4827,
#Partially deleted in new
chr22	36524694	36529173	chr22:36524694-36529173	0	-	36524694	36524694	8553170	3	38,468,98,	0,969,4381,
#Deleted in new
chr22	36536655	36537604	chr22:36536655-36537604	7	-	36536655	36536655	16724991	2	105,339,	0,610,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	36552164	36552700	chr22:36552164-36552700	3	+	36552164	36552164	8553170	2	143,262,	0,274,
#Deleted in new
chr22	36560869	36562915	chr22:36560869-36562915	3	-	36560869	36560869	8553170	1	2046,	0,
#Partially deleted in new
chr22	36563920	36703558	chr22:36563920-36703558	3	-	36564350	36702576	789624	4	966,141,84,1193,	0,2432,23544,138445,
#Deleted in new
chr22	36584488	36585454	chr22:36584488-36585454	0	-	36584488	36584488	8553170	2	470,370,	0,596,
#Partially deleted in new
chr22	36703917	36721472	chr22:36703917-36721472	3	+	36703917	36703917	8553170	2	75,557,	0,16998,
#Partially deleted in new
chr22	36758201	36776153	chr22:36758201-36776153	3	-	36758310	36775707	789624	7	208,110,118,60,60,77,480,	0,4702,5717,7936,9104,9581,17472,
#Partially deleted in new
chr22	36758202	36776133	chr22:36758202-36776133	1	-	36758310	36775707	789624	7	207,110,118,60,60,80,460,	0,4701,5716,7935,9103,9580,17471,
#Partially deleted in new
chr22	36758210	36767819	chr22:36758210-36767819	0	-	36760916	36767819	789624	7	199,76,110,118,60,60,37,	0,2633,4693,5708,7927,9095,9572,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	36758210	36776125	chr22:36758210-36776125	0	-	36758210	36758210	8553170	5	5826,60,60,77,452,	0,7927,9095,9572,17463,
#Deleted in new
chr22	36758210	36761102	chr22:36758210-36761102	0	-	36758210	36758210	8553170	2	199,259,	0,2633,
#Partially deleted in new
chr22	36758210	36766454	chr22:36758210-36766454	0	-	36758210	36758210	8553170	4	199,110,118,317,	0,4693,5708,7927,
#Deleted in new
chr22	36758210	36760907	chr22:36758210-36760907	0	-	36758210	36758210	8553170	2	199,162,	0,2535,
#Partially deleted in new
chr22	36762932	36776103	chr22:36762932-36776103	0	-	36762932	36775707	789624	7	81,118,60,60,80,117,430,	0,986,3205,4373,4850,5050,12741,
#Partially deleted in new
chr22	36763918	36776125	chr22:36763918-36776125	0	-	36763918	36775707	789624	6	118,60,60,77,121,95,	0,2219,3387,3864,11755,12112,
#Deleted in new
chr22	36763995	36768554	chr22:36763995-36768554	0	-	36763995	36767356	789624	5	41,60,60,80,572,	0,2142,3310,3787,3987,
#Partially deleted in new
chr22	36767062	36775699	chr22:36767062-36775699	0	-	36767062	36767062	8553170	3	303,77,26,	0,720,8611,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	36772402	36776256	chr22:36772402-36776256	0	-	36772402	36772402	789624	2	319,583,	0,3271,
#Partially deleted in new
chr22	36800683	36819479	chr22:36800683-36819479	3	-	36800889	36817005	0	5	235,110,133,68,49,	0,12962,14419,16261,18747,
#Partially deleted in new
chr22	36800683	36817035	chr22:36800683-36817035	1	-	36800889	36817005	0	4	235,110,133,91,	0,12962,14419,16261,
#Partially deleted in new
chr22	36800700	36817001	chr22:36800700-36817001	0	-	36811504	36817001	789624	5	218,50,110,133,57,	0,10774,12945,14402,16244,
#Partially deleted in new
chr22	36800766	36815391	chr22:36800766-36815391	1	-	36800889	36815200	789624	4	152,110,133,27,	0,12879,14336,14598,
#Deleted in new
chr22	36813449	36817035	chr22:36813449-36817035	0	-	36813449	36813449	8553170	3	306,133,91,	0,1653,3495,
#Deleted in new
chr22	36813645	36817514	chr22:36813645-36817514	0	-	36813645	36817005	789624	4	110,133,68,159,	0,1457,3299,3710,
#Partially deleted in new
chr22	36816325	36819736	chr22:36816325-36819736	3	+	36816325	36816325	8553170	3	115,398,36,	0,2056,3375,
#Partially deleted in new
chr22	36847371	36870441	chr22:36847371-36870441	3	-	36847371	36847371	789624	2	646,349,	0,22721,
#Partially deleted in new
chr22	36858020	36870380	chr22:36858020-36870380	0	-	36858020	36858020	8553170	2	223,288,	0,12072,
#Partially deleted in new
chr22	36860987	36878015	chr22:36860987-36878015	3	+	36861171	36877823	0	10	216,85,154,71,128,58,99,131,66,388,	0,3057,3931,6404,9427,10664,11339,14665,15041,16640,
#Partially deleted in new
chr22	36860987	36878015	chr22:36860987-36878015	1	+	36861171	36876072	0	9	216,85,154,71,128,58,99,442,388,	0,3057,3931,6404,9427,10664,11339,14665,16640,
#Partially deleted in new
chr22	36860987	36875832	chr22:36860987-36875832	0	+	36867429	36875832	789624	7	216,154,71,128,58,99,180,	0,3931,6404,9427,10664,11339,14665,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	36872136	36877764	chr22:36872136-36877764	0	+	36872136	36872136	8553170	4	118,99,442,137,	0,190,3516,5491,
#Partially deleted in new
chr22	36913627	36940449	chr22:36913627-36940449	3	+	36922207	36938502	0	14	50,248,124,191,158,169,136,158,140,163,91,58,104,3073,	0,8408,9616,12359,15774,16011,16747,17045,19137,20204,21723,22002,22921,23749,
#Partially deleted in new
chr22	36913632	36940433	chr22:36913632-36940433	1	+	36922207	36939233	789624	15	45,248,124,191,158,169,136,158,140,163,91,58,104,1060,1242,	0,8403,9611,12354,15769,16006,16742,17040,19132,20199,21718,21997,22916,23744,25559,
#Partially deleted in new
chr22	36922133	36938611	chr22:36922133-36938611	1	+	36922207	36938502	0	13	150,124,191,158,169,136,176,140,163,91,58,104,1235,	0,1110,3853,7268,7505,8241,8521,10631,11698,13217,13496,14415,15243,
#Deleted in new
chr22	36922611	36930744	chr22:36922611-36930744	0	+	36926026	36930744	789624	7	119,124,191,158,169,136,72,	0,632,3375,6790,7027,7763,8061,
#Deleted in new
chr22	36950528	36953723	chr22:36950528-36953723	7	-	36950528	36950528	16724991	3	191,124,76,	0,2383,3119,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	36965247	36968172	chr22:36965247-36968172	3	+	36965247	36965247	789624	4	266,118,421,187,	0,1142,1920,2738,
#Partially deleted in new
chr22	36991119	37002256	chr22:36991119-37002256	0	-	36991178	37002256	789624	4	157,111,145,64,	0,361,8720,11073,
#Partially deleted in new
chr22	36991124	37007798	chr22:36991124-37007798	3	-	36991178	37002070	789624	6	152,111,145,448,60,70,	0,356,8715,10712,12841,16604,
#Partially deleted in new
chr22	36991124	37007841	chr22:36991124-37007841	1	-	36991178	37003987	789624	7	152,111,145,467,60,96,118,	0,356,8715,10712,12841,16347,16599,
#Partially deleted in new
chr22	36991155	37007802	chr22:36991155-37007802	1	-	36991178	37003987	789624	6	121,111,145,467,60,74,	0,325,8684,10681,12810,16573,
#Partially deleted in new
chr22	37010858	37019527	chr22:37010858-37019527	1	-	37011026	37018732	789624	3	467,616,128,	0,7279,8541,
#Partially deleted in new
chr22	37010858	37019467	chr22:37010858-37019467	1	-	37011026	37018732	789624	2	467,1330,	0,7279,
#Partially deleted in new
chr22	37010858	37020183	chr22:37010858-37020183	3	-	37011026	37018732	789624	3	467,616,22,	0,7279,9303,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	37013224	37013319	chr22:37013224-37013319	3	+	37013224	37013224	8553170	1	95,	0,
#Deleted in new
chr22	37018360	37019640	chr22:37018360-37019640	0	-	37018360	37018732	789624	2	393,58,	0,1222,
#Partially deleted in new
chr22	37019634	37029801	chr22:37019634-37029801	3	+	37024215	37029514	0	3	140,619,586,	0,4557,9581,
#Partially deleted in new
chr22	37019695	37029794	chr22:37019695-37029794	1	+	37024215	37029514	0	4	79,176,619,579,	0,4056,4496,9520,
#Partially deleted in new
chr22	37019767	37029819	chr22:37019767-37029819	1	+	37024215	37029514	0	4	105,176,619,604,	0,3984,4424,9448,
#Partially deleted in new
chr22	37019767	37029822	chr22:37019767-37029822	1	+	37019836	37029514	0	3	105,619,607,	0,4424,9448,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	37019771	37029796	chr22:37019771-37029796	1	+	37024215	37025081	789624	4	3,619,126,581,	0,4420,5230,9444,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	37019797	37029812	chr22:37019797-37029812	0	+	37019797	37019797	8553170	3	75,176,5621,	0,3954,4394,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	37023036	37029821	chr22:37023036-37029821	1	+	37024215	37029514	0	3	891,619,606,	0,1155,6179,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	37024192	37025081	chr22:37024192-37025081	1	+	37024215	37025081	789624	2	618,80,	0,809,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	37051735	37063389	chr22:37051735-37063389	1	+	37051739	37062554	789624	6	214,109,92,96,126,865,	0,1364,4584,5662,7577,10789,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	37051738	37063390	chr22:37051738-37063390	3	+	37051739	37062594	0	8	211,109,92,96,126,100,91,866,	0,1361,4581,5659,7574,9084,9800,10786,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	37051738	37063390	chr22:37051738-37063390	1	+	37051739	37062594	0	9	211,109,92,96,126,100,72,91,866,	0,1361,4581,5659,7574,9084,9365,9800,10786,
#Partially deleted in new
chr22	37051851	37059338	chr22:37051851-37059338	0	+	37051851	37057382	789624	5	98,109,92,126,26,	0,1248,4468,5516,7461,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	37051875	37063374	chr22:37051875-37063374	0	+	37051875	37061583	789624	7	74,109,92,96,126,91,850,	0,1224,4444,5522,7437,9663,10649,
#Partially deleted in new
chr22	37051904	37059516	chr22:37051904-37059516	0	+	37051904	37051904	8553170	5	45,109,92,96,204,	0,1195,4415,5493,7408,
#Deleted in new
chr22	37052169	37053195	chr22:37052169-37053195	0	+	37052539	37053195	789624	2	463,96,	0,930,
#Partially deleted in new
chr22	37053064	37061564	chr22:37053064-37061564	0	+	37053064	37053064	8553170	6	144,92,96,126,100,26,	0,3255,4333,6248,7758,8474,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	37055032	37055347	chr22:37055032-37055347	3	-	37055032	37055032	8553170	1	315,	0,
#Partially deleted in new
chr22	37057397	37061408	chr22:37057397-37061408	0	+	37057397	37057397	8553170	3	96,126,586,	0,1915,3425,
#Partially deleted in new
chr22	37065435	37103653	chr22:37065435-37103653	1	-	37066079	37103539	789624	18	803,137,272,169,117,114,99,146,110,113,137,205,42,185,68,134,203,140,	0,1390,3637,5048,5480,8096,9174,9699,18859,19291,20847,24142,30115,30470,31212,32980,37780,38078,
#Partially deleted in new
chr22	37065435	37103653	chr22:37065435-37103653	1	-	37066079	37103417	789624	19	803,137,66,272,169,117,114,99,146,110,113,137,205,42,185,68,134,203,140,	0,1390,3180,3637,5048,5480,8096,9174,9699,18859,19291,20847,24142,30115,30470,31212,32980,37780,38078,
#Partially deleted in new
chr22	37065435	37109409	chr22:37065435-37109409	3	-	37066079	37103417	789624	18	803,137,272,169,117,114,99,146,110,113,137,205,42,185,68,134,203,71,	0,1390,3637,5048,5480,8096,9174,9699,18859,19291,20847,24142,30115,30470,31212,32980,37780,43903,
#Partially deleted in new
chr22	37065435	37109713	chr22:37065435-37109713	1	-	37066079	37103417	789624	19	803,137,66,272,169,117,114,99,146,110,113,137,205,42,185,68,134,203,211,	0,1390,3180,3637,5048,5480,8096,9174,9699,18859,19291,20847,24142,30115,30470,31212,32980,37780,44067,
#Deleted in new
chr22	37080067	37082847	chr22:37080067-37082847	3	+	37080067	37080067	8553170	3	193,80,191,	0,2411,2589,
#Deleted in new
chr22	37082849	37084825	chr22:37082849-37084825	0	-	37083079	37084825	789624	3	237,110,99,	0,1445,1877,
#Partially deleted in new
chr22	37083939	37103656	chr22:37083939-37103656	1	-	37084131	37103539	789624	10	465,113,137,205,42,185,68,134,203,143,	0,787,2343,5638,11611,11966,12708,14476,19276,19574,
#Partially deleted in new
chr22	37096069	37103518	chr22:37096069-37103518	0	-	37096069	37103417	789624	4	21,68,134,303,	0,578,2346,7146,
#Partially deleted in new
chr22	37125837	37149990	chr22:37125837-37149990	3	-	37128095	37144172	0	10	3011,85,115,166,149,106,79,115,121,166,	0,6546,9490,10390,11749,13279,16596,17683,18247,23987,
#Partially deleted in new
chr22	37128521	37136408	chr22:37128521-37136408	0	-	37128521	37128521	8553170	4	327,85,115,181,	0,3862,6806,7706,
#Partially deleted in new
chr22	37139142	37143621	chr22:37139142-37143621	0	-	37142534	37143621	789624	3	80,318,101,	0,3291,4378,
#Partially deleted in new
chr22	37166756	37182850	chr22:37166756-37182850	3	+	37166756	37166756	8553170	2	208,422,	0,15672,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	37180166	37188289	chr22:37180166-37188289	3	-	37182187	37188213	789624	3	2569,238,127,	0,5051,7996,
#Partially deleted in new
chr22	37180166	37188286	chr22:37180166-37188286	1	-	37182187	37188213	789624	4	701,584,238,124,	0,1985,5051,7996,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	37180166	37198301	chr22:37180166-37198301	0	-	37180166	37180166	8553170	9	701,431,92,238,176,314,64,66,2921,	0,1985,2569,5051,5704,7996,10698,11505,15214,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	37180170	37185948	chr22:37180170-37185948	0	-	37180170	37180170	8553170	2	2565,731,	0,5047,
#Partially deleted in new
chr22	37182173	37188236	chr22:37182173-37188236	1	-	37184375	37188213	789624	4	562,101,238,74,	0,2163,3044,5989,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	37204237	37212322	chr22:37204237-37212322	3	-	37206546	37207803	789624	2	3602,498,	0,7587,
#Partially deleted in new
chr22	37206479	37210965	chr22:37206479-37210965	1	-	37206546	37207803	789624	2	1360,421,	0,4065,
#Deleted in new
chr22	37215737	37215891	chr22:37215737-37215891	7	-	37215737	37215737	16724991	1	154,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	37225260	37244270	chr22:37225260-37244270	3	-	37226672	37244148	0	7	779,133,160,63,118,72,157,	0,1410,5970,6671,7540,16326,18853,
#Partially deleted in new
chr22	37225851	37244448	chr22:37225851-37244448	1	-	37226672	37232893	789624	7	188,133,160,63,118,72,159,	0,819,5379,6080,6949,15735,18438,
#Deleted in new
chr22	37225965	37231503	chr22:37225965-37231503	0	-	37225965	37225965	8553170	3	74,133,273,	0,705,5265,
#Partially deleted in new
chr22	37226672	37244432	chr22:37226672-37244432	1	-	37226672	37244148	789624	6	131,160,63,118,72,298,	0,4558,5259,6128,14914,17462,
#Partially deleted in new
chr22	37226752	37244441	chr22:37226752-37244441	0	-	37226752	37244148	789624	7	51,160,63,118,72,89,152,	0,4478,5179,6048,14834,17361,17537,
#Partially deleted in new
chr22	37232403	37244278	chr22:37232403-37244278	0	-	37232403	37232403	8553170	3	515,72,165,	0,9183,11710,
#Partially deleted in new
chr22	37240804	37244248	chr22:37240804-37244248	1	-	37241012	37244148	789624	3	362,72,135,	0,782,3309,
#Partially deleted in new
chr22	37282026	37297682	chr22:37282026-37297682	0	+	37282569	37297682	789624	6	170,148,83,65,67,119,	0,414,10594,12633,13972,15537,
#Partially deleted in new
chr22	37282382	37315345	chr22:37282382-37315345	3	+	37282569	37313511	789624	13	206,83,65,67,119,81,113,149,112,77,72,155,1907,	0,10238,12277,13616,15181,16843,18524,20871,26829,28605,29073,29637,31056,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	37282474	37300173	chr22:37282474-37300173	1	+	37282569	37300100	789624	7	114,83,65,67,119,81,104,	0,10146,12185,13524,15089,16751,17595,
#Partially deleted in new
chr22	37282486	37300271	chr22:37282486-37300271	1	+	37282569	37300192	789624	7	102,83,65,67,119,81,119,	0,10134,12173,13512,15077,16739,17666,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	37282514	37298402	chr22:37282514-37298402	0	+	37282514	37282514	8553170	5	74,83,65,67,839,	0,10106,12145,13484,15049,
#Partially deleted in new
chr22	37282524	37315341	chr22:37282524-37315341	0	+	37282524	37282524	8553170	13	64,83,65,67,119,81,113,149,115,112,77,719,1903,	0,10096,12135,13474,15039,16701,18382,20729,21647,26687,28463,28931,30914,
#Partially deleted in new
chr22	37282526	37296603	chr22:37282526-37296603	0	+	37282526	37282526	8553170	4	62,83,65,605,	0,10094,12133,13472,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	37282530	37302019	chr22:37282530-37302019	0	+	37282530	37282530	8553170	8	58,83,65,67,119,81,113,139,	0,10090,12129,13468,15033,16695,18376,19350,
#Deleted in new
chr22	37292143	37294692	chr22:37292143-37294692	0	+	37292143	37292143	8553170	2	560,33,	0,2516,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	37300881	37303295	chr22:37300881-37303295	0	+	37300881	37300881	8553170	3	138,97,42,	0,1053,2372,
#Partially deleted in new
chr22	37309967	37313638	chr22:37309967-37313638	0	+	37309967	37313511	789624	5	65,77,72,155,200,	0,1020,1488,2052,3471,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	37339582	37385283	chr22:37339582-37385283	3	-	37339582	37339582	8553170	3	1433,103,434,	0,3018,45267,
#Partially deleted in new
chr22	37340643	37427445	chr22:37340643-37427445	0	-	37340643	37340643	789624	3	326,103,148,	0,1957,86654,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	37352189	37354839	chr22:37352189-37354839	3	-	37352189	37352189	789624	2	251,1714,	0,936,
#Partially deleted in new
chr22	37367959	37427470	chr22:37367959-37427470	3	-	37373071	37375534	789624	3	8037,151,173,	0,49809,59338,
#Partially deleted in new
chr22	37367960	37427470	chr22:37367960-37427470	1	-	37373071	37375534	789624	3	8036,151,173,	0,49808,59337,
#Deleted in new
chr22	37371683	37372858	chr22:37371683-37372858	3	+	37371683	37371683	8553170	2	85,825,	0,350,
#Partially deleted in new
chr22	37375704	37418953	chr22:37375704-37418953	0	-	37375704	37375704	8553170	3	292,151,89,	0,42064,43160,
#Partially deleted in new
chr22	37375704	37420491	chr22:37375704-37420491	0	-	37375704	37375704	8553170	3	292,151,38,	0,42064,44749,
#Partially deleted in new
chr22	37375730	37420445	chr22:37375730-37420445	0	-	37375730	37375730	8553170	3	266,151,162,	0,42038,44553,
#Partially deleted in new
chr22	37375762	37427470	chr22:37375762-37427470	0	-	37375762	37375762	8553170	3	234,151,173,	0,42006,51535,
#Partially deleted in new
chr22	37375762	37427003	chr22:37375762-37427003	0	-	37375762	37375762	8553170	3	234,151,132,	0,42006,51109,
#Partially deleted in new
chr22	37469062	37486387	chr22:37469062-37486387	1	-	37469962	37486177	789624	7	967,86,166,86,154,103,472,	0,3380,5449,7833,10282,11134,16853,
#Partially deleted in new
chr22	37469064	37486401	chr22:37469064-37486401	3	-	37469962	37486177	789624	8	965,86,166,86,154,103,49,479,	0,3378,5447,7831,10280,11132,11656,16858,
#Partially deleted in new
chr22	37469067	37472724	chr22:37469067-37472724	0	-	37469067	37469067	8553170	3	245,88,282,	0,874,3375,
#Partially deleted in new
chr22	37469512	37474564	chr22:37469512-37474564	0	-	37469819	37474564	789624	2	517,53,	0,4999,
#Partially deleted in new
chr22	37474511	37486379	chr22:37474511-37486379	0	-	37479463	37486177	789624	5	166,86,154,103,457,	0,2384,4833,5685,11411,
#Partially deleted in new
chr22	37474562	37481371	chr22:37474562-37481371	0	-	37474562	37480237	789624	6	115,86,154,103,49,137,	0,2333,4782,5634,6158,6672,
#Partially deleted in new
chr22	37476895	37486387	chr22:37476895-37486387	0	-	37480226	37486177	789624	5	86,154,103,49,472,	0,2449,3301,3825,9020,
#Partially deleted in new
chr22	37479411	37484629	chr22:37479411-37484629	0	-	37479411	37480237	789624	5	87,103,49,101,184,	0,785,1309,4826,5034,
#Deleted in new
chr22	37480210	37481067	chr22:37480210-37481067	0	-	37480210	37480210	8553170	2	89,347,	0,510,
#Partially deleted in new
chr22	37480278	37486393	chr22:37480278-37486393	0	-	37480278	37486177	789624	3	50,49,471,	0,442,5644,
#Partially deleted in new
chr22	37490361	37519542	chr22:37490361-37519542	3	-	37491158	37519200	789624	21	1032,113,116,159,103,70,244,112,160,124,29,116,135,192,126,156,210,326,138,252,200,	0,1393,2073,2282,3724,5155,5398,6087,6657,12240,12823,13824,14273,15830,17467,18165,19850,25611,27609,28604,28981,
#Partially deleted in new
chr22	37490361	37496780	chr22:37490361-37496780	0	-	37490361	37490361	8553170	8	1032,113,116,159,103,70,244,332,	0,1393,2073,2282,3724,5155,5398,6087,
#Deleted in new
chr22	37490362	37494576	chr22:37490362-37494576	0	-	37490362	37490362	8553170	5	1031,113,116,159,491,	0,1392,2072,2281,3723,
#Partially deleted in new
chr22	37490363	37519240	chr22:37490363-37519240	1	-	37491158	37519200	789624	20	1030,113,116,159,103,70,244,112,160,124,29,116,135,192,126,156,210,326,138,275,	0,1391,2071,2280,3722,5153,5396,6085,6655,12238,12821,13822,14271,15828,17465,18163,19848,25609,27607,28602,
#Partially deleted in new
chr22	37490363	37509149	chr22:37490363-37509149	1	-	37491158	37509058	789624	17	1030,113,116,159,103,70,244,112,160,124,29,116,135,192,126,156,142,	0,1391,2071,2280,3722,5153,5396,6085,6655,12238,12821,13822,14271,15828,17465,18163,18644,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr22	37492760	37512241	chr22:37492760-37512241	0	-	37492760	37507942	789624	15	42,103,70,244,112,160,124,29,116,135,192,126,156,210,321,	0,1325,2756,2999,3688,4258,9841,10424,11425,11874,13431,15068,15766,17451,19160,
#Deleted in new
chr22	37495849	37497235	chr22:37495849-37497235	0	-	37495849	37495849	8553170	3	154,175,217,	0,599,1169,
#Partially deleted in new
chr22	37495900	37504080	chr22:37495900-37504080	0	-	37495900	37504080	789624	6	103,112,160,124,29,50,	0,548,1118,6701,7284,8130,
#Partially deleted in new
chr22	37507881	37510565	chr22:37507881-37510565	0	-	37507881	37507881	8553170	3	73,156,354,	0,645,2330,
#Partially deleted in new
chr22	37508526	37514805	chr22:37508526-37514805	0	-	37508526	37508526	8553170	3	156,210,194,	0,1685,6085,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	37550025	37551735	chr22:37550025-37551735	3	+	37550025	37550025	8553170	2	59,439,	0,1271,
#Partially deleted in new
chr22	37560446	37569405	chr22:37560446-37569405	3	+	37566349	37568820	789624	3	142,741,1298,	0,5625,7661,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	37563653	37566530	chr22:37563653-37566530	0	+	37566349	37566530	789624	2	129,459,	0,2418,
#Partially deleted in new
chr22	37564405	37566495	chr22:37564405-37566495	0	+	37566349	37566495	789624	2	140,424,	0,1666,
#Partially deleted in new
chr22	37570245	37580080	chr22:37570245-37580080	3	-	37570262	37579905	0	4	167,160,83,181,	0,330,1603,9654,
#Partially deleted in new
chr22	37571848	37582616	chr22:37571848-37582616	0	-	37571848	37579905	789624	4	83,86,58,179,	0,8051,8375,10589,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	37578668	37578922	chr22:37578668-37578922	3	+	37578668	37578668	8553170	1	254,	0,
#Partially deleted in new
chr22	37608474	37633564	chr22:37608474-37633564	3	+	37608860	37632711	0	17	429,85,76,99,124,101,81,141,82,108,153,65,173,197,170,111,964,	0,5715,8447,9973,11763,12338,13141,14852,15077,16494,17322,20987,21523,22428,23521,23930,24126,
#Partially deleted in new
chr22	37608724	37632711	chr22:37608724-37632711	1	+	37608860	37632711	0	17	179,85,127,99,124,101,81,141,82,108,153,65,173,197,170,111,111,	0,5465,8197,9723,11513,12088,12891,14602,14827,16244,17072,20737,21273,22178,23271,23680,23876,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	37608829	37618146	chr22:37608829-37618146	0	+	37608829	37608829	8553170	3	74,85,1225,	0,5360,8092,
#Partially deleted in new
chr22	37608833	37620044	chr22:37608833-37620044	1	+	37608860	37619814	789624	5	70,85,76,99,245,	0,5356,8088,9614,10966,
#Partially deleted in new
chr22	37608834	37621631	chr22:37608834-37621631	0	+	37618462	37621631	789624	7	69,81,76,99,124,101,16,	0,5359,8087,9613,11403,11978,12781,
#Partially deleted in new
chr22	37608844	37633564	chr22:37608844-37633564	1	+	37608860	37632711	0	15	59,85,76,99,124,101,81,141,82,65,173,197,170,111,964,	0,5345,8077,9603,11393,11968,12771,14482,14707,20617,21153,22058,23151,23560,23756,
#Partially deleted in new
chr22	37608934	37620332	chr22:37608934-37620332	0	+	37618462	37620332	789624	6	49,168,81,76,99,95,	0,4089,5259,7987,9513,11303,
#Partially deleted in new
chr22	37608947	37623564	chr22:37608947-37623564	0	+	37609135	37623564	789624	9	207,85,76,99,124,101,81,141,13,	0,5242,7974,9500,11290,11865,12668,14379,14604,
#Partially deleted in new
chr22	37608959	37620275	chr22:37608959-37620275	0	+	37618462	37620275	789624	6	195,168,85,76,99,38,	0,4064,5230,7962,9488,11278,
#Partially deleted in new
chr22	37608976	37620816	chr22:37608976-37620816	0	+	37618462	37620816	789624	7	178,73,85,76,99,124,4,	0,4142,5213,7945,9471,11261,11836,
#Partially deleted in new
chr22	37609039	37633563	chr22:37609039-37633563	1	+	37618462	37632711	0	18	317,159,85,76,99,124,101,81,141,82,108,153,65,173,197,170,111,963,	0,3993,5150,7882,9408,11198,11773,12576,14287,14512,15929,16757,20422,20958,21863,22956,23365,23561,
#Partially deleted in new
chr22	37609039	37618546	chr22:37609039-37618546	0	+	37618462	37618546	789624	4	317,85,76,99,	0,5150,7882,9408,
#Partially deleted in new
chr22	37609059	37618515	chr22:37609059-37618515	0	+	37618462	37618515	789624	5	95,159,85,76,68,	0,3973,5130,7862,9388,
#Partially deleted in new
chr22	37609065	37614274	chr22:37609065-37614274	0	+	37609065	37609065	8553170	3	291,73,85,	0,4053,5124,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	37610141	37614195	chr22:37610141-37614195	0	+	37610141	37610141	8553170	4	345,123,73,6,	0,435,2977,4048,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	37612535	37620267	chr22:37612535-37620267	0	+	37618462	37620267	789624	5	656,85,76,99,30,	0,1654,4386,5912,7702,
#Partially deleted in new
chr22	37613969	37621632	chr22:37613969-37621632	0	+	37618462	37621632	789624	7	63,85,76,99,124,101,17,	0,220,2952,4478,6268,6843,7646,
#Partially deleted in new
chr22	37614132	37621632	chr22:37614132-37621632	0	+	37618462	37621632	789624	6	142,76,99,124,101,17,	0,2789,4315,6105,6680,7483,
#Partially deleted in new
chr22	37618402	37620249	chr22:37618402-37620249	0	+	37618402	37618402	8553170	2	144,450,	0,1397,
#Partially deleted in new
chr22	37620853	37623916	chr22:37620853-37623916	0	+	37620853	37620853	8553170	4	60,81,141,365,	0,762,2473,2698,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	37623828	37627162	chr22:37623828-37627162	0	+	37623828	37623828	8553170	2	1248,1366,	0,1968,
#Deleted in new
chr22	37629461	37630299	chr22:37629461-37630299	0	+	37629461	37629461	8553170	2	65,302,	0,536,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	37630667	37632677	chr22:37630667-37632677	0	+	37630667	37630667	8553170	4	432,170,111,77,	0,1328,1737,1933,
#Partially deleted in new
chr22	37634653	37656042	chr22:37634653-37656042	0	+	37639787	37650128	0	20	200,797,43,105,77,112,77,145,69,91,146,112,82,81,117,164,184,95,44,117,	0,4396,6472,6720,7885,8241,8444,8990,9983,10216,10711,12164,12613,12787,13665,15432,15888,19125,20618,21272,
#Partially deleted in new
chr22	37639474	37656119	chr22:37639474-37656119	3	+	37639787	37655684	0	18	372,43,105,77,112,77,145,69,91,146,112,82,81,117,98,184,95,848,	0,1651,1899,3064,3420,3623,4169,5162,5395,5890,7343,7792,7966,8844,10677,11067,14304,15797,
#Partially deleted in new
chr22	37639668	37656119	chr22:37639668-37656119	1	+	37639787	37655684	789624	18	178,43,105,77,112,77,145,69,91,146,112,82,81,117,98,184,95,848,	0,1457,1705,2870,3226,3429,3975,4968,5201,5696,7149,7598,7772,8650,10483,10873,14110,15603,
#Partially deleted in new
chr22	37639692	37666932	chr22:37639692-37666932	3	+	37641463	37665871	789624	17	154,105,77,112,77,145,69,91,146,112,82,81,117,98,184,95,1378,	0,1681,2846,3202,3405,3951,4944,5177,5672,7125,7574,7748,8626,10459,10849,14086,25862,
#Partially deleted in new
chr22	37640385	37656041	chr22:37640385-37656041	0	+	37640385	37640385	8553170	17	783,105,199,112,77,145,69,91,146,112,82,81,117,98,184,95,116,	0,988,2153,2509,2712,3258,4251,4484,4979,6432,6881,7055,7933,9766,10156,13393,15540,
#Partially deleted in new
chr22	37641381	37647291	chr22:37641381-37647291	0	+	37641381	37641381	8553170	10	97,77,108,77,145,69,91,146,112,25,	0,1157,1517,1716,2262,3255,3488,3983,5436,5885,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	37641831	37658377	chr22:37641831-37658377	3	-	37641831	37641831	789624	6	1133,135,100,72,382,123,	0,1795,6491,8022,8499,16423,
#Partially deleted in new
chr22	37643454	37647506	chr22:37643454-37647506	0	+	37643454	37643454	8553170	7	334,69,91,146,112,82,66,	0,1182,1415,1910,3363,3812,3986,
#Partially deleted in new
chr22	37643713	37645055	chr22:37643713-37645055	0	+	37643713	37643713	8553170	3	75,69,186,	0,923,1156,
#Partially deleted in new
chr22	37646767	37650778	chr22:37646767-37650778	0	+	37646767	37646767	8553170	6	162,82,81,117,98,237,	0,499,673,1551,3384,3774,
#Partially deleted in new
chr22	37646817	37655684	chr22:37646817-37655684	0	+	37646817	37655684	789624	8	112,82,81,117,98,184,95,395,	0,449,623,1501,3334,3724,6961,8472,
#Partially deleted in new
chr22	37647512	37656038	chr22:37647512-37656038	0	+	37647512	37656038	8553170	6	9,117,98,184,95,113,	0,806,2639,3029,6266,8413,
#Partially deleted in new
chr22	37658726	37666934	chr22:37658726-37666934	3	+	37658782	37665871	0	2	630,1380,	0,6828,
#Partially deleted in new
chr22	37664910	37666932	chr22:37664910-37666932	1	+	37665631	37665871	789624	2	193,1378,	0,644,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	37669463	37669739	chr22:37669463-37669739	3	-	37669463	37669463	8553170	1	276,	0,
#Partially deleted in new
chr22	37675607	37679806	chr22:37675607-37679806	3	+	37675702	37679749	0	4	104,80,172,204,	0,1378,2875,3995,
#Deleted in new
chr22	37675651	37677228	chr22:37675651-37677228	0	+	37675651	37675651	8553170	2	60,243,	0,1334,
#Partially deleted in new
chr22	37675656	37679802	chr22:37675656-37679802	0	+	37675702	37677056	789624	4	55,210,172,200,	0,1199,2826,3946,
#Deleted in new
chr22	37675681	37677596	chr22:37675681-37677596	0	+	37675681	37675681	8553170	3	30,80,75,	0,1304,1840,
#Partially deleted in new
chr22	37675687	37679640	chr22:37675687-37679640	0	+	37675702	37678493	789624	5	24,80,17,172,38,	0,1298,2688,2795,3915,
#Partially deleted in new
chr22	37676124	37679802	chr22:37676124-37679802	0	+	37676124	37676124	8553170	4	64,80,172,200,	0,861,2358,3478,
#Partially deleted in new
chr22	37676998	37679802	chr22:37676998-37679802	0	+	37676998	37676998	8553170	3	67,279,200,	0,1377,2604,
#Partially deleted in new
chr22	37681672	37693475	chr22:37681672-37693475	0	+	37681672	37681672	8553170	7	220,106,49,143,98,251,144,	0,6237,6639,7177,9024,9501,11659,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	37686322	37693478	chr22:37686322-37693478	3	+	37686392	37691336	789624	6	153,106,49,143,98,2305,	0,1587,1989,2527,4374,4851,
#Partially deleted in new
chr22	37686322	37693476	chr22:37686322-37693476	0	+	37686392	37691336	789624	7	153,106,49,143,98,251,145,	0,1587,1989,2527,4374,4851,7009,
#Partially deleted in new
chr22	37686342	37688299	chr22:37686342-37688299	0	+	37686342	37686342	8553170	2	133,390,	0,1567,
#Partially deleted in new
chr22	37686345	37690900	chr22:37686345-37690900	0	+	37686345	37686345	8553170	5	130,106,49,143,204,	0,1564,1966,2504,4351,
#Partially deleted in new
chr22	37686359	37693471	chr22:37686359-37693471	1	+	37686392	37691336	789624	7	116,106,49,143,98,251,140,	0,1550,1952,2490,4337,4814,6972,
#Partially deleted in new
chr22	37686413	37726503	chr22:37686413-37726503	3	+	37686413	37691336	789624	13	62,106,49,143,98,251,79,109,174,140,202,172,3319,	0,1496,1898,2436,4283,4760,6918,11174,14892,24013,26796,29349,36771,
#Partially deleted in new
chr22	37687784	37691465	chr22:37687784-37691465	0	+	37687784	37687784	8553170	5	231,49,143,98,292,	0,527,1065,2912,3389,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr22	37696987	37776556	chr22:37696987-37776556	1	+	37701365	37772762	789624	24	102,109,174,140,202,172,3319,115,1044,78,138,57,108,90,110,526,111,148,103,160,114,87,164,2774,	0,600,4318,13439,16222,18775,26197,36310,37411,41654,43907,54784,57889,58113,58562,60625,62166,68682,71086,72040,72274,74662,75613,76795,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr22	37697047	37776556	chr22:37697047-37776556	1	+	37701365	37772762	789624	24	42,109,174,140,202,172,3319,115,1044,78,138,57,108,90,110,526,111,148,103,160,114,87,164,2774,	0,540,4258,13379,16162,18715,26137,36250,37351,41594,43847,54724,57829,58053,58502,60565,62106,68622,71026,71980,72214,74602,75553,76735,
#Partially deleted in new
chr22	37697620	37774048	chr22:37697620-37774048	0	+	37701365	37715823	789624	22	76,174,140,172,3319,115,1044,78,138,57,108,90,110,526,111,148,103,160,114,87,164,266,	0,3685,12806,18142,25564,35677,36778,41021,43274,54151,57256,57480,57929,59992,61533,68049,70453,71407,71641,74029,74980,76162,
#Partially deleted in new
chr22	37697620	37726570	chr22:37697620-37726570	0	+	37697620	37697620	8553170	5	76,174,140,172,3386,	0,3685,12806,18142,25564,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	37746227	37760346	chr22:37746227-37760346	3	+	37746237	37759527	789624	8	193,57,108,90,110,526,111,930,	0,5544,8649,8873,9322,11385,12926,13189,
#Partially deleted in new
chr22	37746232	37774140	chr22:37746232-37774140	1	+	37746237	37772762	789624	14	188,57,108,90,110,526,111,148,103,160,114,87,164,358,	0,5539,8644,8868,9317,11380,12921,19437,21841,22795,23029,25417,26368,27550,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	37746237	37759954	chr22:37746237-37759954	1	+	37746237	37759527	789624	8	183,57,108,90,110,526,111,538,	0,5534,8639,8863,9312,11375,12916,13179,
#Partially deleted in new
chr22	37746269	37758135	chr22:37746269-37758135	0	+	37746269	37758135	789624	5	151,57,90,110,523,	0,5502,8831,9280,11343,
#Partially deleted in new
chr22	37746321	37757963	chr22:37746321-37757963	0	+	37746321	37754940	789624	7	99,89,57,108,90,110,351,	0,4320,5450,8555,8779,9228,11291,
#Partially deleted in new
chr22	37750996	37757982	chr22:37750996-37757982	0	+	37751140	37757982	789624	6	204,57,108,90,110,370,	0,775,3880,4104,4553,6616,
#Partially deleted in new
chr22	37751384	37755574	chr22:37751384-37755574	0	+	37751801	37755574	789624	5	306,57,108,90,25,	0,387,3492,3716,4165,
#Partially deleted in new
chr22	37751397	37758047	chr22:37751397-37758047	0	+	37751801	37758047	789624	6	119,57,108,90,110,435,	0,374,3479,3703,4152,6215,
#Deleted in new
chr22	37754881	37755510	chr22:37754881-37755510	0	+	37754881	37754881	8553170	2	103,410,	0,219,
#Deleted in new
chr22	37805092	37807436	chr22:37805092-37807436	3	+	37805544	37806129	789624	1	2344,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	37807904	37817176	chr22:37807904-37817176	1	+	37807967	37816718	789624	10	259,209,102,147,155,83,172,122,159,248,	0,2044,4982,5558,7221,7513,7758,8295,8662,9024,
#Partially deleted in new
chr22	37807911	37816899	chr22:37807911-37816899	3	+	37807967	37816718	789624	9	252,131,102,147,155,83,172,122,333,	0,2115,4975,5551,7214,7506,7751,8288,8655,
#Partially deleted in new
chr22	37807915	37813300	chr22:37807915-37813300	0	+	37807967	37813300	789624	4	248,209,102,24,	0,2033,4971,5361,
#Partially deleted in new
chr22	37807922	37813485	chr22:37807922-37813485	0	+	37807922	37807922	8553170	3	241,102,209,	0,4964,5354,
#Partially deleted in new
chr22	37807933	37813076	chr22:37807933-37813076	0	+	37807933	37807933	8553170	3	230,131,190,	0,2093,4953,
#Partially deleted in new
chr22	37807937	37815208	chr22:37807937-37815208	0	+	37807967	37812966	789624	4	226,102,147,83,	0,4949,5525,7188,
#Partially deleted in new
chr22	37808013	37813609	chr22:37808013-37813609	0	+	37808013	37813609	789624	4	150,131,102,333,	0,2013,4873,5263,
#Partially deleted in new
chr22	37823381	37825495	chr22:37823381-37825495	3	+	37823406	37825470	789624	2	384,773,	0,1341,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	37830854	37844431	chr22:37830854-37844431	3	-	37831942	37844238	789624	8	1163,108,125,48,72,99,48,521,	0,1782,2103,2304,2829,7645,9332,13056,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	37830855	37834728	chr22:37830855-37834728	0	-	37830855	37830855	8553170	5	1162,108,249,72,812,	0,1781,2102,2828,3061,
#Partially deleted in new
chr22	37831824	37843882	chr22:37831824-37843882	1	-	37831942	37840207	789624	8	193,108,125,48,72,94,48,266,	0,812,1133,1334,1859,6675,8362,11792,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	37831859	37849327	chr22:37831859-37849327	1	-	37831942	37840207	789624	6	158,108,48,72,48,391,	0,777,1299,1824,8327,17077,
#Partially deleted in new
chr22	37831934	37844321	chr22:37831934-37844321	1	-	37831942	37844238	789624	7	83,108,125,48,72,99,411,	0,702,1023,1224,1749,6565,11976,
#Partially deleted in new
chr22	37831969	37844006	chr22:37831969-37844006	0	-	37831969	37844006	789624	7	48,108,152,72,99,48,96,	0,667,988,1714,6530,8217,11941,
#Partially deleted in new
chr22	37831978	37844170	chr22:37831978-37844170	0	-	37831978	37838580	789624	8	39,108,125,48,67,94,48,260,	0,658,979,1180,1705,6521,8208,11932,
#Partially deleted in new
chr22	37832675	37840234	chr22:37832675-37840234	0	-	37832675	37832675	8553170	6	69,125,48,72,94,48,	0,282,483,1008,5824,7511,
#Partially deleted in new
chr22	37832992	37844276	chr22:37832992-37844276	0	-	37833727	37844276	789624	5	214,67,99,48,366,	0,691,5507,7194,10918,
#Partially deleted in new
chr22	37833008	37843882	chr22:37833008-37843882	0	-	37833008	37838580	789624	6	74,48,67,94,48,266,	0,150,675,5491,7178,10608,
#Partially deleted in new
chr22	37833040	37844323	chr22:37833040-37844323	0	-	37833040	37844238	789624	6	55,48,72,99,48,413,	0,118,643,5459,7146,10870,
#Deleted in new
chr22	37844271	37844371	chr22:37844271-37844371	3	-	37844271	37844271	5263520	1	100,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	37847677	37847774	chr22:37847677-37847774	3	-	37847677	37847677	5263520	1	97,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	37848178	37849318	chr22:37848178-37849318	0	-	37848178	37848178	8553170	1	1140,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	37848867	37889407	chr22:37848867-37889407	1	+	37849320	37888464	789624	13	615,49,211,80,62,70,74,172,155,171,498,81,982,	0,1147,2412,6697,9811,14101,14404,21308,25502,26973,28806,37897,39558,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	37849371	37888782	chr22:37849371-37888782	3	+	37849449	37888464	0	13	111,49,211,80,62,70,74,172,155,171,498,81,357,	0,643,1908,6193,9307,13597,13900,20804,24998,26469,28302,37393,39054,
#Partially deleted in new
chr22	37849410	37870273	chr22:37849410-37870273	0	+	37849410	37851542	789624	8	72,49,282,80,62,70,74,98,	0,604,1869,6154,9268,13558,13861,20765,
#Partially deleted in new
chr22	37849416	37888479	chr22:37849416-37888479	1	+	37849449	37888464	0	11	66,49,211,80,62,172,155,171,498,81,54,	0,598,1863,6148,9262,20759,24953,26424,28257,37348,39009,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	37849416	37871284	chr22:37849416-37871284	0	+	37849416	37849416	8553170	5	66,49,211,172,85,	0,598,1863,20759,21783,
#Partially deleted in new
chr22	37849419	37870189	chr22:37849419-37870189	0	+	37849419	37851339	789624	7	63,211,80,62,70,74,14,	0,1860,6145,9259,13549,13852,20756,
#Partially deleted in new
chr22	37849420	37886868	chr22:37849420-37886868	0	+	37849420	37849420	8553170	12	62,49,211,80,62,70,74,172,155,171,498,104,	0,594,1859,6144,9258,13548,13851,20755,24949,26420,28253,37344,
#Partially deleted in new
chr22	37849480	37888630	chr22:37849480-37888630	1	+	37851411	37888464	789624	11	583,211,62,70,74,172,155,171,498,81,205,	0,1799,9198,13488,13791,20695,24889,26360,28193,37284,38945,
#Partially deleted in new
chr22	37849619	37863288	chr22:37849619-37863288	0	+	37850053	37863288	789624	7	94,49,211,80,62,70,17,	0,395,1660,5945,9059,13349,13652,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	37858564	37871290	chr22:37858564-37871290	0	+	37858564	37858564	8553170	5	176,70,74,172,91,	0,4404,4707,11611,12635,
#Partially deleted in new
chr22	37870164	37888631	chr22:37870164-37888631	0	+	37870164	37870164	8553170	6	183,155,171,498,81,206,	0,4205,5676,7509,16600,18261,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	37876147	37895563	chr22:37876147-37895563	3	+	37876147	37876147	8553170	1	19416,	0,
#Partially deleted in new
chr22	37886703	37888631	chr22:37886703-37888631	0	+	37886703	37886703	8553170	2	142,206,	0,1722,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	37891346	37891448	chr22:37891346-37891448	3	+	37891346	37891346	8553170	1	102,	0,
#Partially deleted in new
chr22	37905656	37922286	chr22:37905656-37922286	0	+	37912407	37922286	789624	6	70,49,142,89,143,315,	0,6295,6694,12050,13379,16315,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr22	37906296	37942822	chr22:37906296-37942822	3	+	37906422	37940830	0	16	272,49,142,89,143,455,58,383,416,135,127,91,74,115,47,2114,	0,5655,6054,11410,12739,15675,18363,19364,21114,25502,26256,26501,26742,30783,31449,34412,
#Partially deleted in new
chr22	37906881	37922036	chr22:37906881-37922036	0	+	37906881	37906881	8553170	4	597,49,142,65,	0,5070,5469,15090,
#Partially deleted in new
chr22	37925846	37937153	chr22:37925846-37937153	0	+	37925846	37937153	789624	7	197,410,135,127,91,74,74,	0,1564,5952,6706,6951,7192,11233,
#Partially deleted in new
chr22	37926562	37942009	chr22:37926562-37942009	0	+	37926562	37926562	8553170	10	564,416,135,127,91,74,115,47,825,340,	0,848,5236,5990,6235,6476,10517,11183,14146,15107,
#Partially deleted in new
chr22	37932594	37941187	chr22:37932594-37941187	0	+	37932594	37940830	789624	6	85,91,74,115,74,479,	0,203,444,4485,5151,8114,
#Partially deleted in new
chr22	37943049	37953669	chr22:37943049-37953669	1	-	37944174	37953149	789624	6	1197,101,132,183,112,52,	0,1367,1992,4231,9997,10568,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	37943049	37944898	chr22:37943049-37944898	3	+	37943049	37943049	8553170	1	1849,	0,
#Partially deleted in new
chr22	37943520	37953647	chr22:37943520-37953647	3	-	37944174	37953149	789624	7	726,101,132,183,63,112,200,	0,896,1521,3760,7939,9526,9927,
#Partially deleted in new
chr22	37943525	37953596	chr22:37943525-37953596	1	-	37944174	37953149	789624	7	721,101,132,183,63,112,248,	0,891,1516,3755,7934,9521,9823,
#Partially deleted in new
chr22	37944124	37953669	chr22:37944124-37953669	1	-	37944174	37953149	789624	7	122,101,132,183,63,112,52,	0,292,917,3156,7335,8922,9493,
#Partially deleted in new
chr22	37944512	37953601	chr22:37944512-37953601	0	-	37944512	37953149	789624	6	5,132,183,63,112,68,	0,529,2768,6947,8534,9021,
#Partially deleted in new
chr22	37945160	37953545	chr22:37945160-37953545	0	-	37945160	37953149	789624	4	13,183,63,499,	0,2120,6299,7886,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	37950964	37951778	chr22:37950964-37951778	3	+	37950964	37950964	8553170	1	814,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	37952606	37972298	chr22:37952606-37972298	0	+	37952606	37952606	8553170	5	209,70,131,72,69,	0,4166,6739,14492,19623,
#Partially deleted in new
chr22	37953662	37969312	chr22:37953662-37969312	3	+	37953787	37967715	0	5	145,70,131,72,1688,	0,3110,5683,13436,13962,
#Partially deleted in new
chr22	37953696	38041106	chr22:37953696-38041106	1	+	37953787	38041092	789624	6	111,70,131,72,159,39,	0,3076,5649,13402,32457,87371,
#Partially deleted in new
chr22	37953696	37967376	chr22:37953696-37967376	1	+	37953787	37967174	789624	3	111,129,278,	0,3076,13402,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	37953698	37988334	chr22:37953698-37988334	0	+	37953787	37972272	789624	8	109,70,131,72,81,171,212,1044,	0,3074,5647,13400,18531,31353,32402,33592,
#Partially deleted in new
chr22	37953698	37967798	chr22:37953698-37967798	0	+	37953787	37959427	789624	5	109,129,131,72,174,	0,3074,5647,13400,13926,
#Partially deleted in new
chr22	37953698	37967293	chr22:37953698-37967293	1	+	37953787	37959427	789624	4	109,129,131,195,	0,3074,5647,13400,
#Partially deleted in new
chr22	37953710	38025768	chr22:37953710-38025768	1	+	37953787	38025666	789624	5	97,70,131,72,190,	0,3062,5635,13388,71868,
#Partially deleted in new
chr22	37953710	37967560	chr22:37953710-37967560	1	+	37953787	37967174	789624	4	97,70,131,462,	0,3062,5635,13388,
#Partially deleted in new
chr22	37953726	37967801	chr22:37953726-37967801	1	+	37953855	37967715	789624	5	134,70,131,72,177,	0,3046,5619,13372,13898,
#Deleted in new
chr22	37967562	37967624	chr22:37967562-37967624	3	+	37967562	37967562	5263520	1	62,	0,
#Partially deleted in new
chr22	37970685	37983414	chr22:37970685-37983414	0	-	37971241	37983414	789624	4	613,155,269,58,	0,3358,7181,12671,
#Partially deleted in new
chr22	37972299	37987422	chr22:37972299-37987422	3	-	37973494	37983784	789624	5	1899,269,512,103,78,	0,5567,11057,12039,15045,
#Partially deleted in new
chr22	37972299	37984537	chr22:37972299-37984537	1	-	37973494	37983784	789624	4	1899,269,512,199,	0,5567,11057,12039,
#Partially deleted in new
chr22	37977922	37984346	chr22:37977922-37984346	0	-	37977922	37983784	789624	3	213,512,148,	0,5434,6276,
#Partially deleted in new
chr22	37978081	37984408	chr22:37978081-37984408	0	-	37978081	37978081	8553170	2	54,70,	0,6257,
#Partially deleted in new
chr22	37986192	38026685	chr22:37986192-38026685	0	+	37986192	38026310	789624	3	120,279,412,	0,39676,40081,
#Partially deleted in new
chr22	37986198	38026637	chr22:37986198-38026637	0	+	37986198	38026035	789624	2	114,769,	0,39670,
#Deleted in new
chr22	37988793	37988853	chr22:37988793-37988853	3	+	37988793	37988793	5263520	1	60,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	38032164	38034228	chr22:38032164-38034228	3	-	38032164	38032164	8553170	2	991,64,	0,2000,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	38040303	38041915	chr22:38040303-38041915	0	+	38040303	38040303	8553170	1	1612,	0,
#Deleted in new
chr22	38043229	38043920	chr22:38043229-38043920	3	+	38043229	38043229	8553170	1	691,	0,
#Partially deleted in new
chr22	38056310	38059306	chr22:38056310-38059306	0	+	38057809	38059306	789624	4	288,172,98,73,	0,954,1442,2923,
#Partially deleted in new
chr22	38057179	38073940	chr22:38057179-38073940	3	-	38057179	38057179	8553170	2	338,76,	0,16685,
#Partially deleted in new
chr22	38057199	38075701	chr22:38057199-38075701	3	+	38057809	38075132	0	13	290,98,112,129,67,90,54,63,134,93,51,145,838,	0,553,2034,7802,10504,11833,13638,14482,15277,15800,16573,17107,17664,
#Partially deleted in new
chr22	38057227	38072608	chr22:38057227-38072608	0	+	38057809	38072608	789624	9	209,98,112,129,67,90,54,63,132,	0,525,2006,7774,10476,11805,13610,14454,15249,
#Partially deleted in new
chr22	38057254	38075693	chr22:38057254-38075693	0	+	38057254	38057254	8553170	12	182,98,112,129,67,90,54,63,134,93,679,830,	0,498,1979,7747,10449,11778,13583,14427,15222,15745,16518,17609,
#Partially deleted in new
chr22	38057394	38068114	chr22:38057394-38068114	0	+	38057809	38068114	789624	6	95,98,112,129,67,43,	0,358,1839,7607,10309,10677,
#Partially deleted in new
chr22	38057403	38070891	chr22:38057403-38070891	0	+	38057809	38065116	789624	5	184,98,129,90,54,	0,349,7598,11629,13434,
#Partially deleted in new
chr22	38057403	38070891	chr22:38057403-38070891	0	+	38057403	38057403	8553170	7	86,31,112,129,67,90,54,	0,416,1830,7598,10300,11629,13434,
#Deleted in new
chr22	38057403	38058158	chr22:38057403-38058158	0	+	38057403	38057403	8553170	2	184,406,	0,349,
#Partially deleted in new
chr22	38057406	38075701	chr22:38057406-38075701	1	+	38057809	38075132	0	13	181,98,112,129,67,90,54,63,134,93,51,145,838,	0,346,1827,7595,10297,11626,13431,14275,15070,15593,16366,16900,17457,
#Partially deleted in new
chr22	38057406	38065226	chr22:38057406-38065226	0	+	38057406	38057406	8553170	4	181,98,112,225,	0,346,1827,7595,
#Partially deleted in new
chr22	38057482	38068085	chr22:38057482-38068085	0	+	38057482	38057482	8553170	5	105,98,112,129,382,	0,270,1751,7519,10221,
#Partially deleted in new
chr22	38057652	38069085	chr22:38057652-38069085	0	+	38057809	38069085	789624	5	198,112,129,67,53,	0,1581,7349,10051,11380,
#Partially deleted in new
chr22	38057655	38071728	chr22:38057655-38071728	0	+	38057809	38065116	789624	6	195,129,67,90,54,47,	0,7346,10048,11377,13182,14026,
#Partially deleted in new
chr22	38065112	38072007	chr22:38065112-38072007	0	+	38065112	38065112	8553170	5	18,67,90,54,326,	0,2591,3920,5725,6569,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	38067476	38072534	chr22:38067476-38072534	0	+	38067476	38067476	8553170	5	294,90,54,63,58,	0,1556,3361,4205,5000,
#Partially deleted in new
chr22	38078133	38083142	chr22:38078133-38083142	3	-	38078387	38082873	789624	5	571,840,144,222,101,	0,2706,3755,4526,4908,
#Partially deleted in new
chr22	38078133	38084093	chr22:38078133-38084093	0	-	38078133	38078133	8553170	2	571,106,	0,5854,
#Deleted in new
chr22	38081954	38084093	chr22:38081954-38084093	0	-	38081954	38082873	789624	4	78,222,320,106,	0,705,1087,2033,
#Partially deleted in new
chr22	38084888	38110670	chr22:38084888-38110670	3	-	38085299	38110525	789624	14	487,47,208,141,217,136,153,147,117,72,62,87,76,196,	0,797,1353,2235,3859,4207,4633,12143,13174,13522,22963,23366,24244,25586,
#Partially deleted in new
chr22	38084902	38110645	chr22:38084902-38110645	1	-	38085299	38110525	789624	15	473,47,106,60,141,217,136,153,147,117,72,62,87,76,171,	0,783,1339,1487,2221,3845,4193,4619,12129,13160,13508,22949,23352,24230,25572,
#Partially deleted in new
chr22	38085164	38088938	chr22:38085164-38088938	0	-	38085324	38088938	789624	4	211,208,141,191,	0,1077,1959,3583,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	38090126	38091559	chr22:38090126-38091559	3	+	38090126	38090126	8553170	1	1433,	0,
#Partially deleted in new
chr22	38111494	38181802	chr22:38111494-38181802	3	-	38112160	38169426	789624	17	811,74,168,155,137,151,164,79,162,109,183,97,188,184,216,254,139,	0,1009,1992,4032,4580,9264,11600,14876,16774,17959,21336,23493,28487,31610,33943,57723,70169,
#Partially deleted in new
chr22	38111495	38181754	chr22:38111495-38181754	1	-	38112160	38169426	789624	16	810,74,168,155,137,151,164,79,109,183,97,188,184,216,254,91,	0,1008,1991,4031,4579,9263,11599,14875,17958,21335,23492,28486,31609,33942,57722,70168,
#Partially deleted in new
chr22	38111499	38181829	chr22:38111499-38181829	1	-	38112160	38169426	789624	16	806,74,168,155,137,151,164,79,109,183,97,188,184,216,254,46,	0,1004,1987,4027,4575,9259,11595,14871,17954,21331,23488,28482,31605,33938,57718,70284,
#Deleted in new
chr22	38111871	38112855	chr22:38111871-38112855	0	-	38111871	38111871	8553170	2	434,352,	0,632,
#Partially deleted in new
chr22	38113537	38121040	chr22:38113537-38121040	0	-	38113537	38113537	8553170	4	117,323,137,282,	0,1989,2537,7221,
#Partially deleted in new
chr22	38115555	38126442	chr22:38115555-38126442	0	-	38116184	38126442	789624	6	126,137,91,151,164,72,	0,519,764,5203,7539,10815,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	38116093	38135063	chr22:38116093-38135063	0	-	38125670	38135062	789624	10	118,151,164,53,79,52,162,109,183,76,	0,4665,7001,9545,10277,11313,12175,13360,16737,18894,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	38120758	38126755	chr22:38120758-38126755	0	-	38120758	38120758	8553170	4	151,164,53,385,	0,2336,4880,5612,
#Partially deleted in new
chr22	38123203	38127228	chr22:38123203-38127228	0	-	38123203	38123203	8553170	3	55,79,467,	0,3167,3558,
#Partially deleted in new
chr22	38126370	38181814	chr22:38126370-38181814	0	-	38126370	38126370	8553170	5	157,36,91,254,31,	0,13763,19192,42847,55413,
#Partially deleted in new
chr22	38126995	38132877	chr22:38126995-38132877	0	-	38127402	38132877	789624	4	463,162,109,47,	0,1273,2458,5835,
#Deleted in new
chr22	38128160	38129506	chr22:38128160-38129506	0	-	38128160	38128160	8553170	2	270,53,	0,1293,
#Partially deleted in new
chr22	38128342	38145464	chr22:38128342-38145464	0	-	38128342	38145464	789624	6	88,109,183,97,184,27,	0,1111,4488,6645,14762,17095,
#Partially deleted in new
chr22	38129540	38143214	chr22:38129540-38143214	0	-	38129540	38143214	789624	5	22,183,97,188,101,	0,3290,5447,10441,13573,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	38130215	38150612	chr22:38130215-38150612	3	+	38130215	38130215	8553170	1	20397,	0,
#Partially deleted in new
chr22	38134987	38143494	chr22:38134987-38143494	0	-	38134987	38143179	789624	3	97,188,390,	0,4994,8117,
#Partially deleted in new
chr22	38140064	38181780	chr22:38140064-38181780	0	-	38140064	38169426	789624	4	105,184,250,117,	0,3040,29153,41599,
#Partially deleted in new
chr22	38140133	38168077	chr22:38140133-38168077	0	-	38140133	38140133	8553170	4	36,184,216,135,	0,2971,5304,27809,
#Partially deleted in new
chr22	38140134	38181830	chr22:38140134-38181830	1	-	38140138	38169426	789624	4	35,216,254,47,	0,5303,29083,41649,
#Partially deleted in new
chr22	38143228	38163672	chr22:38143228-38163672	0	-	38143228	38143228	8553170	3	60,216,258,	0,2209,20186,
#Partially deleted in new
chr22	38143236	38168090	chr22:38143236-38168090	0	-	38143236	38143236	8553170	4	52,83,216,173,	0,1659,2201,24681,
#Partially deleted in new
chr22	38145492	38181808	chr22:38145492-38181808	1	-	38148532	38169426	789624	4	161,131,250,25,	0,3000,23725,36291,
#Partially deleted in new
chr22	38145591	38181828	chr22:38145591-38181828	1	-	38148532	38169426	789624	4	62,131,254,165,	0,2901,23626,36072,
#Partially deleted in new
chr22	38145605	38192100	chr22:38145605-38192100	1	-	38148532	38169426	789624	4	48,131,254,68,	0,2887,23612,46427,
#Partially deleted in new
chr22	38145623	38180404	chr22:38145623-38180404	0	-	38145623	38169426	789624	3	30,254,80,	0,23594,34701,
#Partially deleted in new
chr22	38147367	38181829	chr22:38147367-38181829	0	-	38147367	38147367	8553170	4	108,131,254,46,	0,1125,21850,34416,
#Partially deleted in new
chr22	38147378	38181783	chr22:38147378-38181783	0	-	38147378	38147378	8553170	3	97,254,120,	0,21839,34285,
#Partially deleted in new
chr22	38169274	38205690	chr22:38169274-38205690	0	-	38169274	38169426	789624	2	197,398,	0,36018,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	38200766	38204050	chr22:38200766-38204050	0	+	38200766	38200766	8553170	1	3284,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	38201881	38216511	chr22:38201881-38216511	3	+	38213853	38214878	789624	3	331,67,2092,	0,11941,12538,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	38201931	38216503	chr22:38201931-38216503	1	+	38213853	38214878	789624	3	307,67,2084,	0,11891,12488,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	38201931	38216503	chr22:38201931-38216503	1	+	38214470	38214878	789624	2	281,2084,	0,12488,
#Partially deleted in new
chr22	38201995	38214750	chr22:38201995-38214750	0	+	38214470	38214750	789624	2	217,331,	0,12424,
#Partially deleted in new
chr22	38202795	38214760	chr22:38202795-38214760	0	+	38213853	38214760	789624	3	289,67,341,	0,11027,11624,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	38203019	38216503	chr22:38203019-38216503	1	+	38213853	38214878	789624	3	65,67,2084,	0,10803,11400,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	38213534	38216505	chr22:38213534-38216505	1	+	38213853	38214878	789624	3	172,67,2086,	0,288,885,
#Partially deleted in new
chr22	38219290	38273034	chr22:38219290-38273034	3	-	38221468	38247961	789624	9	2420,195,170,92,76,91,166,250,151,	0,5494,6133,7488,11378,11953,26644,28479,53593,
#Partially deleted in new
chr22	38219311	38273010	chr22:38219311-38273010	0	-	38246858	38247961	789624	10	2399,195,170,92,76,91,166,101,250,127,	0,5473,6112,7467,11357,11932,26623,27473,28458,53572,
#Deleted in new
chr22	38219311	38224103	chr22:38219311-38224103	0	-	38219311	38219311	8553170	1	4792,	0,
#Partially deleted in new
chr22	38219323	38272664	chr22:38219323-38272664	1	-	38221468	38247961	789624	9	2387,195,170,92,76,91,166,250,166,	0,5461,6100,7455,11345,11920,26611,28446,53175,
#Deleted in new
chr22	38220974	38222932	chr22:38220974-38222932	0	-	38220974	38220974	8553170	2	772,291,	0,1667,
#Partially deleted in new
chr22	38221144	38246092	chr22:38221144-38246092	0	-	38221468	38246092	789624	8	566,21,195,170,92,76,91,158,	0,1497,3640,4279,5634,9524,10099,24790,
#Partially deleted in new
chr22	38225519	38239502	chr22:38225519-38239502	0	-	38225519	38225519	8553170	5	74,92,76,91,97,	0,1259,5149,5724,13886,
#Partially deleted in new
chr22	38225577	38246738	chr22:38225577-38246738	0	-	38225577	38225577	8553170	6	16,92,76,91,166,145,	0,1201,5091,5666,20357,21016,
#Partially deleted in new
chr22	38226379	38231318	chr22:38226379-38231318	0	-	38226379	38226379	8553170	2	491,75,	0,4864,
#Partially deleted in new
chr22	38226598	38231456	chr22:38226598-38231456	0	-	38226598	38226598	8553170	3	272,76,213,	0,4070,4645,
#Partially deleted in new
chr22	38230717	38273005	chr22:38230717-38273005	0	-	38231363	38247961	789624	4	27,156,250,122,	0,526,17052,42166,
#Partially deleted in new
chr22	38231319	38232248	chr22:38231319-38232248	3	+	38231319	38231319	8553170	2	96,201,	0,728,
#Partially deleted in new
chr22	38231330	38272938	chr22:38231330-38272938	0	-	38246858	38247961	789624	5	4,166,80,250,55,	0,14604,15475,16439,41553,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	38231719	38231993	chr22:38231719-38231993	3	+	38231719	38231719	8553170	1	274,	0,
#Partially deleted in new
chr22	38246715	38273005	chr22:38246715-38273005	0	-	38246715	38246715	8553170	3	170,250,122,	0,1054,26168,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	38281027	38281289	chr22:38281027-38281289	3	-	38281027	38281027	8553170	1	262,	0,
#Partially deleted in new
chr22	38290690	38318084	chr22:38290690-38318084	3	-	38293286	38314157	0	11	1248,65,140,193,149,171,229,149,111,88,99,	0,2564,3418,3651,8095,9204,10033,12170,12447,23391,27295,
#Partially deleted in new
chr22	38290691	38317408	chr22:38290691-38317408	1	-	38293286	38314157	0	11	1247,65,140,193,149,171,229,149,111,88,249,	0,2563,3417,3650,8094,9203,10032,12169,12446,23390,26468,
#Partially deleted in new
chr22	38291917	38398522	chr22:38291917-38398522	3	-	38293286	38314157	789624	15	21,65,140,193,149,171,229,149,111,88,99,162,54,54,85,	0,1337,2191,2424,6868,7977,8806,10943,11220,22164,44690,69481,88452,89019,106520,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	38291929	38294527	chr22:38291929-38294527	0	-	38293286	38294527	789624	4	614,65,140,186,	0,1325,2179,2412,
#Partially deleted in new
chr22	38292313	38298852	chr22:38292313-38298852	0	-	38293286	38298852	789624	5	298,65,140,193,67,	0,941,1795,2028,6472,
#Deleted in new
chr22	38292908	38294459	chr22:38292908-38294459	0	-	38292908	38292908	8553170	3	411,140,118,	0,1200,1433,
#Partially deleted in new
chr22	38293249	38317439	chr22:38293249-38317439	1	-	38293286	38314157	0	10	70,140,193,149,171,229,149,111,88,280,	0,859,1092,5536,6645,7474,9611,9888,20832,23910,
#Partially deleted in new
chr22	38293259	38300763	chr22:38293259-38300763	0	-	38298790	38300763	789624	7	60,140,193,61,149,171,40,	0,849,1082,2127,5526,6635,7464,
#Deleted in new
chr22	38293902	38294534	chr22:38293902-38294534	0	-	38293902	38293902	8553170	2	346,193,	0,439,
#Partially deleted in new
chr22	38296204	38317411	chr22:38296204-38317411	1	-	38296560	38314157	789624	8	482,149,171,229,149,111,88,252,	0,2581,3690,4519,6656,6933,17877,20955,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	38296205	38317439	chr22:38296205-38317439	1	-	38297104	38314157	789624	8	950,149,171,229,149,111,88,280,	0,2580,3689,4518,6655,6932,17876,20954,
#Partially deleted in new
chr22	38296625	38300065	chr22:38296625-38300065	0	-	38296625	38296625	8553170	3	61,149,171,	0,2160,3269,
#Partially deleted in new
chr22	38297601	38300025	chr22:38297601-38300025	0	-	38298790	38300025	789624	4	397,110,149,131,	0,492,1184,2293,
#Partially deleted in new
chr22	38298028	38303009	chr22:38298028-38303009	0	-	38298089	38303009	789624	5	175,149,171,229,149,	0,757,1866,2695,4832,
#Partially deleted in new
chr22	38298579	38302990	chr22:38298579-38302990	0	-	38298579	38298579	8553170	4	355,171,229,130,	0,1315,2144,4281,
#Partially deleted in new
chr22	38299955	38316973	chr22:38299955-38316973	0	-	38299955	38314157	789624	6	110,229,149,111,88,309,	0,768,2905,3182,14126,16709,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	38335761	38398916	chr22:38335761-38398916	5	-	38335761	38335761	16724991	8	48,49,99,97,162,54,54,137,	0,363,846,11727,25637,44608,45175,63018,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	38336336	38344434	chr22:38336336-38344434	4	-	38336336	38336336	16724991	3	370,98,156,	0,7530,7942,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	38344531	38398873	chr22:38344531-38398873	6	-	38344531	38344531	16724991	5	210,162,54,54,94,	0,16867,35838,36405,54248,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	38344623	38398873	chr22:38344623-38398873	4	-	38344623	38344623	16724991	6	118,97,162,54,54,94,	0,2865,16775,35746,36313,54156,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	38350376	38398860	chr22:38350376-38398860	4	-	38350376	38350376	16724991	5	623,162,54,54,81,	0,11022,29993,30560,48403,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	38360398	38397445	chr22:38360398-38397445	4	-	38360398	38360398	16724991	6	470,162,60,54,54,138,	0,1000,9587,19971,20538,36909,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	38361139	38398929	chr22:38361139-38398929	5	-	38361139	38361139	16724991	4	421,54,54,150,	0,19230,19797,37640,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	38361380	38384096	chr22:38361380-38384096	5	-	38361380	38361380	16724991	7	180,51,60,54,54,54,47,	0,1673,8605,18989,19556,20550,22669,
#Partially deleted in new
chr22	38368897	38398921	chr22:38368897-38398921	4	-	38368897	38368897	16724991	5	482,60,54,54,142,	0,1088,11472,12039,29882,
#Partially deleted in new
chr22	38380150	38398920	chr22:38380150-38398920	4	-	38380150	38380150	16724991	3	273,54,141,	0,786,18629,
#Deleted in new
chr22	38387917	38388857	chr22:38387917-38388857	3	-	38387917	38387917	8553170	2	361,180,	0,760,
#Partially deleted in new
chr22	38424287	38427336	chr22:38424287-38427336	3	+	38424287	38424287	8553170	3	136,160,260,	0,525,2789,
#Partially deleted in new
chr22	38426326	38455199	chr22:38426326-38455199	3	-	38426794	38428132	0	2	1845,220,	0,28653,
#Partially deleted in new
chr22	38468061	38483447	chr22:38468061-38483447	3	+	38468233	38482536	789624	5	263,101,159,253,952,	0,6461,11531,13150,14434,
#Partially deleted in new
chr22	38468077	38481635	chr22:38468077-38481635	1	+	38468233	38481523	789624	4	247,101,159,424,	0,6445,11515,13134,
#Partially deleted in new
chr22	38474328	38482922	chr22:38474328-38482922	0	+	38474328	38474328	8553170	5	30,101,159,253,427,	0,194,5264,6883,8167,
#Partially deleted in new
chr22	38483439	38506337	chr22:38483439-38506337	1	-	38485934	38506237	789624	13	3001,243,60,62,111,173,161,142,66,134,100,151,387,	0,4433,8616,10270,10581,11190,11446,12356,14645,15000,15960,17690,22511,
#Partially deleted in new
chr22	38485676	38488961	chr22:38485676-38488961	0	-	38485676	38485676	8553170	2	764,1089,	0,2196,
#Partially deleted in new
chr22	38485680	38506294	chr22:38485680-38506294	0	-	38485680	38485680	8553170	12	760,4237,62,111,173,161,142,66,134,100,151,344,	0,2198,8029,8340,8949,9205,10115,12404,12759,13719,15449,20270,
#Partially deleted in new
chr22	38485877	38506312	chr22:38485877-38506312	0	-	38485934	38506237	789624	13	563,237,60,62,111,173,161,142,66,134,100,151,362,	0,2001,6178,7832,8143,8752,9008,9918,12207,12562,13522,15252,20073,
#Partially deleted in new
chr22	38485934	38506237	chr22:38485934-38506237	3	-	38485934	38506237	789624	13	506,237,60,62,111,173,161,142,66,134,100,151,287,	0,1944,6121,7775,8086,8695,8951,9861,12150,12505,13465,15195,20016,
#Partially deleted in new
chr22	38485934	38506237	chr22:38485934-38506237	1	-	38485934	38506237	789624	13	506,243,60,62,111,173,161,142,66,134,100,151,287,	0,1938,6121,7775,8086,8695,8951,9861,12150,12505,13465,15195,20016,
#Partially deleted in new
chr22	38488025	38493771	chr22:38488025-38493771	0	-	38489411	38493771	789624	4	90,231,60,62,	0,1202,4030,5684,
#Partially deleted in new
chr22	38490312	38507660	chr22:38490312-38507660	0	-	38490312	38490312	8553170	12	124,60,62,111,173,161,142,66,134,100,151,70,	0,1743,3397,3708,4317,4573,5483,7772,8127,9087,10817,17278,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	38493360	38495046	chr22:38493360-38495046	0	-	38493360	38493360	8553170	4	411,111,173,161,	0,660,1269,1525,
#Deleted in new
chr22	38494309	38495046	chr22:38494309-38495046	0	-	38494309	38494309	8553170	2	493,161,	0,576,
#Partially deleted in new
chr22	38498552	38505901	chr22:38498552-38505901	0	-	38498552	38498552	8553170	4	21,100,151,440,	0,847,2577,6909,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	38505164	38506306	chr22:38505164-38506306	0	-	38505164	38505164	8553170	2	85,356,	0,786,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr22	38518948	38570286	chr22:38518948-38570286	3	-	38520019	38568256	0	14	1141,117,61,115,74,92,73,42,53,83,147,45,84,244,	0,2659,18643,19346,19590,20372,30976,33717,36408,43338,47641,48634,49257,51094,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr22	38518948	38568409	chr22:38518948-38568409	1	-	38520019	38568256	0	11	1141,117,61,115,74,42,53,83,147,45,204,	0,2659,18643,19346,19590,33717,36408,43338,47641,48634,49257,
#Partially deleted in new
chr22	38538294	38570131	chr22:38538294-38570131	0	-	38538294	38568256	789624	9	115,74,42,53,83,147,45,84,78,	0,244,14371,17062,23992,28295,29288,29911,31759,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	38545767	38570184	chr22:38545767-38570184	1	-	38549920	38568256	789624	9	363,636,42,53,83,147,45,84,142,	0,3594,6898,9589,16519,20822,21815,22438,24275,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	38549497	38570184	chr22:38549497-38570184	0	-	38549497	38549497	8553170	8	500,42,53,83,147,45,84,142,	0,3168,5859,12789,17092,18085,18708,20545,
#Partially deleted in new
chr22	38552670	38568409	chr22:38552670-38568409	0	-	38552670	38568256	789624	6	37,53,83,147,45,204,	0,2686,9616,13919,14912,15535,
#Deleted in new
chr22	38569283	38570204	chr22:38569283-38570204	0	-	38569283	38569283	789624	2	107,162,	0,759,
#Partially deleted in new
chr22	38574930	38575431	chr22:38574930-38575431	7	-	38574930	38574930	16724991	2	60,104,	0,397,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr22	38578119	38656629	chr22:38578119-38656629	1	-	38586124	38650168	789624	17	8080,106,152,159,95,88,80,108,124,105,102,147,77,70,83,236,510,	0,13315,19084,21643,27134,29269,42092,45052,48060,50118,50714,58331,60626,61535,67443,71907,78000,
#Partially deleted in new
chr22	38582168	38656303	chr22:38582168-38656303	3	-	38582348	38650150	789624	19	233,56,135,180,153,158,95,88,80,109,126,105,102,147,77,70,83,236,184,	0,693,3896,9192,15035,17595,23085,25220,38043,41003,44009,46069,46665,54282,56577,57486,63394,67858,73951,
#Partially deleted in new
chr22	38582168	38586145	chr22:38582168-38586145	0	-	38582168	38582168	8553170	3	233,183,81,	0,693,3896,
#Partially deleted in new
chr22	38586023	38656629	chr22:38586023-38656629	1	-	38586042	38650168	789624	17	176,180,153,158,95,88,80,108,124,105,102,147,77,70,83,236,510,	0,5337,11180,13740,19230,21365,34188,37148,40156,42214,42810,50427,52722,53631,59539,64003,70096,
#Partially deleted in new
chr22	38591433	38656303	chr22:38591433-38656303	0	-	38591433	38591433	8553170	16	107,153,158,95,88,80,108,124,105,102,147,77,110,83,236,184,	0,5770,8330,13820,15955,28778,31738,34746,36804,37400,45017,47312,48181,54129,58593,64686,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr22	38597206	38636551	chr22:38597206-38636551	0	-	38597206	38597206	8553170	11	150,158,95,88,148,80,108,124,105,102,101,	0,2557,8047,10182,21189,23005,25965,28973,31031,31627,39244,
#Partially deleted in new
chr22	38620215	38629002	chr22:38620215-38629002	0	-	38620215	38620215	8553170	5	76,108,124,105,169,	0,2956,5964,8022,8618,
#Partially deleted in new
chr22	38636545	38653853	chr22:38636545-38653853	0	-	38636545	38636545	8553170	6	52,77,70,83,236,44,	0,2200,3109,9017,13481,17264,
#Partially deleted in new
chr22	38636556	38656278	chr22:38636556-38656278	0	-	38636556	38636556	8553170	5	41,77,83,236,159,	0,2189,9006,13470,19563,
#Partially deleted in new
chr22	38638771	38656281	chr22:38638771-38656281	0	-	38638771	38638771	8553170	5	51,110,83,236,162,	0,843,6791,11255,17348,
#Partially deleted in new
chr22	38649944	38656362	chr22:38649944-38656362	0	-	38649944	38649944	8553170	2	318,243,	0,6175,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	38656635	38668467	chr22:38656635-38668467	0	+	38656635	38656635	8553170	2	115,451,	0,11381,
#Partially deleted in new
chr22	38656635	38671235	chr22:38656635-38671235	0	+	38656635	38656635	8553170	3	115,116,352,	0,11381,14248,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	38656639	38670989	chr22:38656639-38670989	0	+	38668054	38670989	789624	5	111,188,94,116,106,	0,316,10929,11377,14244,
#Partially deleted in new
chr22	38656650	38673846	chr22:38656650-38673846	0	+	38668054	38673236	0	6	100,140,116,106,119,688,	0,8895,11366,14233,14419,16508,
#Partially deleted in new
chr22	38656654	38673854	chr22:38656654-38673854	3	+	38668054	38673236	0	5	96,116,106,119,696,	0,11362,14229,14415,16504,
#Partially deleted in new
chr22	38656670	38671309	chr22:38656670-38671309	0	+	38656670	38656670	8553170	4	80,116,106,240,	0,11346,14213,14399,
#Partially deleted in new
chr22	38656675	38671188	chr22:38656675-38671188	0	+	38668054	38671188	789624	6	75,188,140,116,106,119,	0,280,8870,11341,14208,14394,
#Partially deleted in new
chr22	38656675	38671136	chr22:38656675-38671136	0	+	38656675	38656675	8553170	4	75,140,116,253,	0,8870,11341,14208,
#Partially deleted in new
chr22	38656687	38673413	chr22:38656687-38673413	0	+	38656687	38656687	8553170	5	63,116,223,119,255,	0,11329,14079,14382,16471,
#Partially deleted in new
chr22	38665594	38673844	chr22:38665594-38673844	1	+	38665594	38673236	789624	5	91,116,106,119,686,	0,2422,5289,5475,7564,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	38666507	38668750	chr22:38666507-38668750	3	-	38666507	38666507	8553170	2	229,181,	0,2062,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	38667584	38681770	chr22:38667584-38681770	3	-	38667584	38667584	8553170	2	741,45,	0,14141,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	38667861	38670303	chr22:38667861-38670303	1	-	38667861	38667861	8553170	2	464,616,	0,1826,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	38667895	38670945	chr22:38667895-38670945	0	+	38667895	38667895	8553170	2	237,179,	0,2871,
#Partially deleted in new
chr22	38670467	38681820	chr22:38670467-38681820	1	-	38670467	38670467	8553170	2	1230,95,	0,11258,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	38675813	38681787	chr22:38675813-38681787	0	-	38675813	38675813	8553170	2	676,62,	0,5912,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	38681947	38685421	chr22:38681947-38685421	3	+	38681978	38683841	789624	4	148,119,118,1655,	0,375,931,1819,
#Partially deleted in new
chr22	38682171	38684160	chr22:38682171-38684160	0	+	38682171	38682171	8553170	3	270,118,394,	0,707,1595,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	38685542	38700667	chr22:38685542-38700667	3	-	38687901	38699987	789624	4	2459,195,129,865,	0,3392,3753,14260,
#Partially deleted in new
chr22	38687717	38699970	chr22:38687717-38699970	0	-	38687901	38699970	789624	3	284,195,168,	0,1217,12085,
#Partially deleted in new
chr22	38687923	38689323	chr22:38687923-38689323	0	-	38687923	38687923	8553170	2	78,389,	0,1011,
#Partially deleted in new
chr22	38689073	38701030	chr22:38689073-38701030	0	-	38689073	38699987	789624	4	56,129,321,65,	0,222,10729,11892,
#Partially deleted in new
chr22	38689295	38700940	chr22:38689295-38700940	0	-	38689295	38699987	789624	3	129,321,79,	0,10507,11566,
#Deleted in new
chr22	38699800	38701556	chr22:38699800-38701556	0	-	38699800	38699987	789624	2	323,300,	0,1456,
#Deleted in new
chr22	38699802	38700930	chr22:38699802-38700930	0	-	38699802	38699987	789624	2	816,27,	0,1101,
#Deleted in new
chr22	38700160	38701032	chr22:38700160-38701032	0	-	38700160	38700160	8553170	2	458,67,	0,805,
#Deleted in new
chr22	38700275	38701418	chr22:38700275-38701418	0	-	38700275	38700275	8553170	2	343,162,	0,981,
#Deleted in new
chr22	38700281	38700942	chr22:38700281-38700942	0	-	38700281	38700281	8553170	2	337,143,	0,518,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	38705722	38733587	chr22:38705722-38733587	3	+	38705955	38730704	789624	12	425,112,181,349,124,115,145,183,136,179,201,2976,	0,3122,10184,10929,16019,18574,20283,20535,21490,22260,23739,24889,
#Partially deleted in new
chr22	38705741	38716867	chr22:38705741-38716867	0	+	38708895	38716867	789624	4	76,112,181,216,	0,3103,10165,10910,
#Partially deleted in new
chr22	38705948	38721822	chr22:38705948-38721822	0	+	38705955	38715927	789624	4	199,181,349,81,	0,9958,10703,15793,
#Partially deleted in new
chr22	38706117	38716240	chr22:38706117-38716240	0	+	38706117	38706117	8553170	3	30,112,334,	0,2727,9789,
#Partially deleted in new
chr22	38706510	38716669	chr22:38706510-38716669	0	+	38708895	38716669	789624	4	271,112,181,18,	0,2334,9396,10141,
#Partially deleted in new
chr22	38706519	38715962	chr22:38706519-38715962	0	+	38708895	38715962	789624	3	337,112,56,	0,2325,9387,
#Deleted in new
chr22	38722742	38723505	chr22:38722742-38723505	7	-	38722742	38722742	16724991	1	763,	0,
#Deleted in new
chr22	38725175	38726428	chr22:38725175-38726428	0	+	38725175	38725175	8553170	3	265,145,171,	0,830,1082,
#Deleted in new
chr22	38725806	38726388	chr22:38725806-38726388	0	+	38725806	38725806	8553170	2	344,131,	0,451,
#Partially deleted in new
chr22	38726305	38738299	chr22:38726305-38738299	0	+	38726305	38737999	789624	8	135,136,179,201,48,74,228,349,	0,907,1677,3156,4306,8018,9723,11645,
#Deleted in new
chr22	38728255	38732239	chr22:38728255-38732239	0	+	38728255	38728255	8553170	2	1407,1628,	0,2356,
#Partially deleted in new
chr22	38730612	38736184	chr22:38730612-38736184	0	+	38730612	38730704	789624	4	269,83,74,156,	0,3537,3711,5416,
#Deleted in new
chr22	38734323	38736175	chr22:38734323-38736175	0	+	38734323	38736090	789624	3	74,137,147,	0,850,1705,
#Partially deleted in new
chr22	38734324	38738295	chr22:38734324-38738295	0	+	38734324	38737999	789624	2	73,345,	0,3626,
#Partially deleted in new
chr22	38734724	38755528	chr22:38734724-38755528	1	-	38736266	38752628	0	19	1656,93,168,116,85,222,166,44,78,255,128,71,94,96,138,164,159,65,257,	0,3448,3862,4148,4617,4997,5542,6282,6769,7576,10959,13988,15041,15500,16173,16485,17782,19917,20547,
#Partially deleted in new
chr22	38734724	38738765	chr22:38734724-38738765	3	+	38734724	38734724	8553170	2	317,144,	0,3897,
#Partially deleted in new
chr22	38734729	38738990	chr22:38734729-38738990	3	+	38734729	38734729	8553170	3	85,316,126,	0,3697,4135,
#Partially deleted in new
chr22	38734735	38755999	chr22:38734735-38755999	1	-	38736266	38752628	0	18	1645,93,168,116,85,222,166,44,78,255,128,71,94,159,138,164,159,237,	0,3437,3851,4137,4606,4986,5531,6271,6758,7565,10948,13977,15030,15489,16162,16474,17771,21027,
#Partially deleted in new
chr22	38735908	38794143	chr22:38735908-38794143	3	-	38736266	38752628	0	19	472,93,168,116,85,222,166,44,78,255,128,71,94,96,138,164,159,100,76,	0,2264,2678,2964,3433,3813,4358,5098,5585,6392,9775,12804,13857,14316,14989,15301,16598,30325,58159,
#Deleted in new
chr22	38736609	38736792	chr22:38736609-38736792	3	-	38736609	38736609	8553170	1	183,	0,
#Deleted in new
chr22	38737759	38739423	chr22:38737759-38739423	0	-	38738034	38739423	789624	4	506,168,116,82,	0,827,1113,1582,
#Deleted in new
chr22	38738237	38739247	chr22:38738237-38739247	0	-	38738237	38738237	8553170	3	28,168,375,	0,349,635,
#Partially deleted in new
chr22	38738925	38742438	chr22:38738925-38742438	0	-	38738925	38738925	8553170	7	63,85,222,166,162,78,138,	0,416,796,1341,1963,2568,3375,
#Partially deleted in new
chr22	38739002	38749041	chr22:38739002-38749041	3	+	38739002	38739002	8553170	2	165,335,	0,9704,
#Partially deleted in new
chr22	38739340	38742481	chr22:38739340-38742481	0	-	38739340	38739340	8553170	5	86,222,784,78,181,	0,381,926,2153,2960,
#Partially deleted in new
chr22	38740291	38742578	chr22:38740291-38742578	0	-	38740291	38740291	8553170	4	141,44,78,278,	0,715,1202,2009,
#Deleted in new
chr22	38742624	38743115	chr22:38742624-38743115	3	+	38742624	38742624	8553170	1	491,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	38743494	38743910	chr22:38743494-38743910	3	+	38743494	38743494	8553170	1	416,	0,
#Partially deleted in new
chr22	38745686	38756000	chr22:38745686-38756000	0	-	38745686	38752628	789624	8	125,71,94,96,164,159,65,238,	0,3026,4079,4538,5523,6820,8955,10076,
#Partially deleted in new
chr22	38748712	38754993	chr22:38748712-38754993	0	-	38748712	38752628	789624	7	71,94,96,138,164,159,352,	0,1053,1512,2185,2497,3794,5929,
#Deleted in new
chr22	38749765	38751441	chr22:38749765-38751441	0	-	38749765	38749765	8553170	4	94,96,138,232,	0,459,1132,1444,
#Partially deleted in new
chr22	38750224	38754951	chr22:38750224-38754951	0	-	38750224	38752628	789624	5	96,164,159,65,54,	0,985,2282,4417,4673,
#Partially deleted in new
chr22	38750887	38754982	chr22:38750887-38754982	0	-	38750887	38752628	789624	5	148,164,159,65,85,	0,322,1619,3754,4010,
#Partially deleted in new
chr22	38750897	38754943	chr22:38750897-38754943	0	-	38750897	38750897	8553170	4	476,159,65,46,	0,1609,3744,4000,
#Partially deleted in new
chr22	38750991	38755634	chr22:38750991-38755634	0	-	38750991	38752628	789624	4	44,164,159,77,	0,218,1515,4566,
#Partially deleted in new
chr22	38751006	38754775	chr22:38751006-38754775	0	-	38751006	38752628	789624	4	88,164,159,134,	0,203,1500,3635,
#Partially deleted in new
chr22	38751019	38755429	chr22:38751019-38755429	0	-	38751019	38752628	789624	5	16,164,159,49,158,	0,190,1487,3622,4252,
#Partially deleted in new
chr22	38778507	38794173	chr22:38778507-38794173	3	-	38779448	38782731	789624	4	1106,84,208,106,	0,2418,4155,15560,
#Partially deleted in new
chr22	38778852	38794148	chr22:38778852-38794148	0	-	38778852	38778852	8553170	2	761,81,	0,15215,
#Partially deleted in new
chr22	38780717	38794198	chr22:38780717-38794198	1	-	38780871	38782731	789624	3	292,208,131,	0,1945,13350,
#Partially deleted in new
chr22	38785304	38794132	chr22:38785304-38794132	0	-	38785304	38785304	8553170	2	693,65,	0,8763,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	38818451	38843982	chr22:38818451-38843982	1	-	38822608	38843858	789624	5	4382,180,248,226,748,	0,4631,8048,9835,24783,
#Partially deleted in new
chr22	38822608	38843858	chr22:38822608-38843858	3	-	38822608	38843858	789624	5	225,180,248,226,624,	0,474,3891,5678,20626,
#Deleted in new
chr22	38861449	38872314	chr22:38861449-38872314	3	-	38866208	38872190	0	5	5752,67,66,44,193,	0,10030,10242,10452,10672,
#Deleted in new
chr22	38864228	38872216	chr22:38864228-38872216	1	-	38866208	38872190	789624	5	2919,67,66,44,95,	0,7251,7463,7673,7893,
#Deleted in new
chr22	38869571	38872249	chr22:38869571-38872249	0	-	38869571	38869571	8553170	4	1975,66,44,128,	0,2120,2330,2550,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	38921226	38924708	chr22:38921226-38924708	3	+	38921226	38921226	8553170	2	86,592,	0,2890,
#Deleted in new
chr22	38952740	38953416	chr22:38952740-38953416	0	+	38952740	38952740	8553170	2	110,456,	0,220,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	38952750	38963183	chr22:38952750-38963183	1	+	38957691	38962509	0	6	100,133,145,295,116,689,	0,4837,6791,8636,9347,9744,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	38957521	38963183	chr22:38957521-38963183	1	+	38957691	38962509	0	5	199,145,295,116,689,	0,2020,3865,4576,4973,
#Deleted in new
chr22	38957521	38959686	chr22:38957521-38959686	0	+	38957521	38957521	8553170	2	199,145,	0,2020,
#Partially deleted in new
chr22	38957521	38992778	chr22:38957521-38992778	3	+	38957691	38992445	0	5	199,145,295,116,348,	0,2020,3865,4576,34909,
#Partially deleted in new
chr22	38982346	38992546	chr22:38982346-38992546	1	+	38982453	38992445	0	8	124,157,280,115,154,220,116,116,	0,1728,3465,3951,7110,9060,9687,10084,
#Partially deleted in new
chr22	38982398	38992804	chr22:38982398-38992804	1	+	38982453	38992488	789624	7	72,157,280,115,154,295,771,	0,1676,3413,3899,7058,8933,9635,
#Partially deleted in new
chr22	38982405	38992761	chr22:38982405-38992761	0	+	38982453	38991518	0	7	65,157,280,115,295,116,331,	0,1669,3406,3892,8926,9628,10025,
#Partially deleted in new
chr22	38982408	38992784	chr22:38982408-38992784	3	+	38982453	38992445	0	8	62,157,280,115,154,295,116,354,	0,1666,3403,3889,7048,8923,9625,10022,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	38991558	38998209	chr22:38991558-38998209	3	-	38991558	38991558	789624	5	60,184,66,257,124,	0,839,1379,5922,6527,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	39014082	39020352	chr22:39014082-39020352	3	+	39014362	39018387	0	4	297,157,280,2084,	0,1512,3683,4186,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	39014261	39018926	chr22:39014261-39018926	0	+	39014362	39017934	789624	3	118,280,658,	0,3504,4007,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	39014362	39033276	chr22:39014362-39033276	3	+	39014362	39032316	8553170	7	17,193,280,115,157,280,1079,	0,8459,10707,11194,15000,17331,17835,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	39021112	39033276	chr22:39021112-39033276	3	+	39021519	39032316	789624	7	424,193,280,115,157,280,1079,	0,1709,3957,4444,8250,10581,11085,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	39021112	39033261	chr22:39021112-39033261	1	+	39021519	39032316	789624	4	424,193,280,1064,	0,1709,10581,11085,
#Partially deleted in new
chr22	39021501	39032316	chr22:39021501-39032316	1	+	39021519	39032316	789624	4	35,157,280,119,	0,7861,10192,10696,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	39040603	39053910	chr22:39040603-39053910	3	+	39040960	39052695	0	7	374,154,280,115,157,280,1334,	0,2333,4337,4824,8821,11470,11973,
#Partially deleted in new
chr22	39040603	39045192	chr22:39040603-39045192	0	+	39040603	39040603	8553170	3	164,154,252,	0,2333,4337,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	39040856	39044423	chr22:39040856-39044423	1	+	39040960	39044217	0	3	121,154,341,	0,2080,3226,
#Partially deleted in new
chr22	39045183	39052287	chr22:39045183-39052287	0	+	39045183	39045183	8553170	3	359,157,214,	0,4241,6890,
#Partially deleted in new
chr22	39070413	39070671	chr22:39070413-39070671	7	+	39070413	39070413	16724991	1	258,	0,
#Partially deleted in new
chr22	39077004	39087743	chr22:39077004-39087743	3	+	39077361	39087421	0	8	374,154,295,115,154,289,116,337,	0,1927,3928,4466,6726,9274,10006,10402,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	39077066	39079700	chr22:39077066-39079700	0	+	39077066	39077066	8553170	2	312,769,	0,1865,
#Partially deleted in new
chr22	39077078	39081687	chr22:39077078-39081687	0	+	39077078	39077078	8553170	3	300,295,217,	0,3854,4392,
#Partially deleted in new
chr22	39077083	39083884	chr22:39077083-39083884	0	+	39077083	39077083	8553170	5	85,154,295,115,154,	0,1848,3849,4387,6647,
#Partially deleted in new
chr22	39078511	39081194	chr22:39078511-39081194	0	+	39078511	39078511	8553170	3	127,154,262,	0,420,2421,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	39079661	39082679	chr22:39079661-39082679	0	+	39079661	39079661	8553170	2	1566,1209,	0,1809,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	39080634	39083214	chr22:39080634-39083214	0	+	39080634	39080634	8553170	2	593,1744,	0,836,
#Deleted in new
chr22	39091585	39092110	chr22:39091585-39092110	5	+	39091585	39091585	16724991	2	211,103,	0,422,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	39091633	39092855	chr22:39091633-39092855	7	+	39091633	39091633	16724991	3	163,103,326,	0,374,896,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	39097223	39104067	chr22:39097223-39104067	1	+	39100278	39103697	789624	5	120,157,268,125,376,	0,3048,4013,4694,6468,
#Partially deleted in new
chr22	39097223	39102558	chr22:39097223-39102558	1	+	39100278	39102558	789624	4	120,157,268,47,	0,3048,4013,5288,
#Partially deleted in new
chr22	39097223	39102571	chr22:39097223-39102571	1	+	39100278	39102571	789624	5	120,157,268,125,60,	0,3048,4013,4694,5288,
#Partially deleted in new
chr22	39097270	39100536	chr22:39097270-39100536	0	+	39097270	39097270	8553170	2	73,265,	0,3001,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	39097274	39103998	chr22:39097274-39103998	1	+	39100278	39102571	789624	6	69,157,268,125,94,310,	0,2997,3962,4643,5237,6414,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	39097284	39104067	chr22:39097284-39104067	3	+	39100278	39103697	789624	5	59,157,268,125,379,	0,2987,3952,4633,6404,
#Partially deleted in new
chr22	39100278	39102558	chr22:39100278-39102558	1	+	39100278	39102558	789624	3	150,268,47,	0,958,2233,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	39120166	39149832	chr22:39120166-39149832	0	-	39120166	39120166	8553170	2	407,44,	0,29622,
#Deleted in new
chr22	39120292	39120566	chr22:39120292-39120566	7	-	39120292	39120292	16724991	1	274,	0,
#Partially deleted in new
chr22	39130771	39152650	chr22:39130771-39152650	3	-	39133890	39152444	0	6	3277,352,67,66,44,275,	0,3629,7864,10599,19017,21604,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	39133089	39136760	chr22:39133089-39136760	3	+	39133089	39133089	8553170	1	3671,	0,
#Partially deleted in new
chr22	39133583	39152444	chr22:39133583-39152444	1	-	39133890	39152444	789624	6	465,73,67,66,44,69,	0,817,5052,7787,16205,18792,
#Deleted in new
chr22	39133690	39134779	chr22:39133690-39134779	0	-	39133690	39133690	8553170	2	355,379,	0,710,
#Partially deleted in new
chr22	39134568	39152552	chr22:39134568-39152552	0	-	39134568	39152444	789624	4	184,67,44,177,	0,4067,15220,17807,
#Partially deleted in new
chr22	39141119	39152540	chr22:39141119-39152540	0	-	39141119	39141119	8553170	3	317,44,165,	0,8669,11256,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	39147117	39152674	chr22:39147117-39152674	0	-	39147117	39147117	8553170	2	2715,299,	0,5258,
#Deleted in new
chr22	39155524	39155945	chr22:39155524-39155945	7	+	39155524	39155524	16724991	1	421,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	39223358	39244751	chr22:39223358-39244751	3	-	39225722	39243963	0	7	1955,153,145,206,90,97,851,	0,2336,6725,8263,10076,12419,20542,
#Partially deleted in new
chr22	39224934	39240909	chr22:39224934-39240909	1	-	39225722	39240872	0	7	379,153,145,206,90,97,55,	0,760,5149,6687,8500,10843,15920,
#Partially deleted in new
chr22	39230158	39243016	chr22:39230158-39243016	0	-	39230158	39235844	789624	5	70,206,90,97,91,	0,1463,3276,5619,12767,
#Partially deleted in new
chr22	39230183	39241130	chr22:39230183-39241130	0	-	39230183	39235844	789624	5	45,206,90,97,118,	0,1438,3251,5594,10829,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	39242187	39279897	chr22:39242187-39279897	2	+	39242187	39242187	8553170	3	109,1548,817,	0,34388,36893,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	39242224	39251814	chr22:39242224-39251814	1	+	39242224	39242224	8553170	2	72,1665,	0,7925,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	39264986	39279897	chr22:39264986-39279897	1	+	39264986	39264986	8553170	3	382,1548,817,	0,11589,14094,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	39292987	39295563	chr22:39292987-39295563	3	+	39292987	39292987	8553170	2	17,1761,	0,815,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	39294141	39295589	chr22:39294141-39295589	1	+	39294141	39294141	8553170	3	365,219,261,	0,617,1187,
#Partially deleted in new
chr22	39312881	39318614	chr22:39312881-39318614	1	-	39312939	39318439	789624	9	103,120,96,102,161,187,136,169,215,	0,309,752,1225,1804,2487,3824,4579,5518,
#Partially deleted in new
chr22	39312883	39319771	chr22:39312883-39319771	3	-	39312939	39319597	0	10	101,120,96,102,161,187,136,169,193,177,	0,307,750,1223,1802,2485,3822,4577,5516,6711,
#Deleted in new
chr22	39312883	39313705	chr22:39312883-39313705	0	-	39312883	39312883	8553170	2	101,515,	0,307,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	39312883	39320389	chr22:39312883-39320389	0	-	39312883	39312883	8553170	10	101,120,96,102,161,187,316,169,193,663,	0,307,750,1223,1802,2485,3822,4577,5516,6843,
#Deleted in new
chr22	39312883	39313729	chr22:39312883-39313729	0	-	39312883	39312883	8553170	2	427,96,	0,750,
#Deleted in new
chr22	39312886	39314965	chr22:39312886-39314965	0	-	39312886	39312886	8553170	3	98,1018,280,	0,304,1799,
#Partially deleted in new
chr22	39313706	39319623	chr22:39313706-39319623	0	-	39313706	39318439	789624	8	23,102,161,187,136,169,193,234,	0,400,979,1662,2999,3754,4693,5683,
#Deleted in new
chr22	39313818	39313911	chr22:39313818-39313911	3	-	39313818	39313818	789624	1	93,	0,
#Deleted in new
chr22	39313930	39315486	chr22:39313930-39315486	0	-	39313930	39313930	8553170	3	278,161,118,	0,755,1438,
#Deleted in new
chr22	39314149	39315429	chr22:39314149-39315429	0	-	39314149	39314149	8553170	3	259,161,61,	0,536,1219,
#Partially deleted in new
chr22	39314699	39319111	chr22:39314699-39319111	0	-	39314699	39319111	789624	6	147,187,136,169,193,84,	0,669,2006,2761,3700,4328,
#Deleted in new
chr22	39315212	39315307	chr22:39315212-39315307	3	-	39315212	39315212	789624	1	95,	0,
#Partially deleted in new
chr22	39315361	39317068	chr22:39315361-39317068	0	-	39315361	39315361	8553170	2	194,363,	0,1344,
#Partially deleted in new
chr22	39315368	39319595	chr22:39315368-39319595	0	-	39315368	39319595	789624	5	187,136,169,193,97,	0,1337,2092,3031,4130,
#Partially deleted in new
chr22	39315551	39319623	chr22:39315551-39319623	0	-	39316843	39319597	789624	5	4,316,169,193,29,	0,1154,1909,2848,4043,
#Deleted in new
chr22	39317050	39319649	chr22:39317050-39319649	0	-	39317050	39317050	8553170	3	579,193,55,	0,1349,2544,
#Deleted in new
chr22	39317395	39319592	chr22:39317395-39319592	0	-	39317395	39317395	8553170	3	234,193,203,	0,1004,1994,
#Deleted in new
chr22	39317854	39319623	chr22:39317854-39319623	0	-	39317854	39317854	8553170	2	738,29,	0,1740,
#Deleted in new
chr22	39318111	39319577	chr22:39318111-39319577	0	-	39318111	39318111	8553170	2	481,188,	0,1278,
#Deleted in new
chr22	39318399	39319625	chr22:39318399-39319625	0	-	39318399	39318399	8553170	2	193,254,	0,972,
#Deleted in new
chr22	39319049	39319113	chr22:39319049-39319113	3	-	39319049	39319049	789624	1	64,	0,
#Partially deleted in new
chr22	39349924	39378389	chr22:39349924-39378389	1	+	39350010	39377690	789624	4	185,238,146,792,	0,24391,26127,27673,
#Partially deleted in new
chr22	39349948	39376033	chr22:39349948-39376033	1	+	39350010	39375955	789624	3	161,238,98,	0,24367,25987,
#Partially deleted in new
chr22	39349986	39377911	chr22:39349986-39377911	0	+	39350010	39374651	789624	4	123,345,146,314,	0,24329,26065,27611,
#Partially deleted in new
chr22	39349990	39377075	chr22:39349990-39377075	1	+	39350010	39377041	789624	4	119,238,146,61,	0,24325,26061,27024,
#Partially deleted in new
chr22	39349995	39385588	chr22:39349995-39385588	3	+	39350010	39381914	789624	4	114,238,146,3893,	0,24320,26056,31700,
#Partially deleted in new
chr22	39350005	39376210	chr22:39350005-39376210	0	+	39350005	39350005	8553170	2	104,1895,	0,24310,
#Partially deleted in new
chr22	39364169	39378381	chr22:39364169-39378381	1	+	39364194	39377690	789624	4	127,238,146,784,	0,10146,11882,13428,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	39379609	39380015	chr22:39379609-39380015	3	+	39379609	39379609	8553170	1	406,	0,
#Partially deleted in new
chr22	39399740	39431882	chr22:39399740-39431882	3	+	39399802	39430222	0	11	95,137,154,87,139,114,112,145,223,163,1868,	0,15265,15759,17050,17970,18991,19778,22086,26962,28280,30274,
#Partially deleted in new
chr22	39399777	39416849	chr22:39399777-39416849	0	+	39399777	39399777	8553170	4	58,263,154,59,	0,15102,15722,17013,
#Partially deleted in new
chr22	39399783	39436823	chr22:39399783-39436823	1	+	39399802	39436571	0	11	52,137,154,87,139,114,112,145,223,163,334,	0,15222,15716,17007,17927,18948,19735,22043,26919,28237,36706,
#Deleted in new
chr22	39414729	39416796	chr22:39414729-39416796	0	+	39414729	39414729	8553170	3	413,154,6,	0,770,2061,
#Partially deleted in new
chr22	39416743	39417816	chr22:39416743-39417816	0	+	39416743	39416743	8553170	2	134,106,	0,967,
#Partially deleted in new
chr22	39421734	39428134	chr22:39421734-39428134	0	+	39421734	39421734	8553170	3	237,223,114,	0,4968,6286,
#Partially deleted in new
chr22	39432430	39437060	chr22:39432430-39437060	0	+	39432430	39432430	8553170	2	233,571,	0,4059,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	39457343	39492194	chr22:39457343-39492194	3	+	39487347	39488949	789624	2	214,4848,	0,30003,
#Partially deleted in new
chr22	39472787	39487830	chr22:39472787-39487830	0	+	39487347	39487830	789624	2	85,484,	0,14559,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	39475806	39476822	chr22:39475806-39476822	3	-	39475806	39475806	789624	2	133,365,	0,651,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	39477512	39487588	chr22:39477512-39487588	0	+	39486165	39487588	789624	3	227,83,242,	0,8653,9834,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	39499431	39504302	chr22:39499431-39504302	0	+	39499431	39499431	8553170	3	291,182,100,	0,4264,4771,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	39500099	39515708	chr22:39500099-39515708	1	+	39511294	39515373	789624	7	158,332,151,178,263,708,479,	0,4103,11188,11749,12132,13417,15130,
#Partially deleted in new
chr22	39500346	39504454	chr22:39500346-39504454	0	+	39500346	39500346	8553170	4	149,47,125,252,	0,1331,1966,3856,
#Deleted in new
chr22	39501730	39502385	chr22:39501730-39502385	0	+	39501730	39501730	8553170	2	290,73,	0,582,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	39502210	39503862	chr22:39502210-39503862	0	+	39502210	39502210	8553170	3	227,196,167,	0,831,1485,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	39502251	39504534	chr22:39502251-39504534	0	+	39502251	39502251	8553170	3	186,182,332,	0,1444,1951,
#Partially deleted in new
chr22	39502301	39516380	chr22:39502301-39516380	0	+	39511294	39512442	0	6	136,332,151,178,177,2864,	0,1901,8986,9547,10016,11215,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	39502352	39518132	chr22:39502352-39518132	3	+	39511294	39514323	0	6	85,332,151,178,263,4616,	0,1850,8935,9496,9879,11164,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	39502354	39504711	chr22:39502354-39504711	0	+	39502354	39502354	8553170	2	83,509,	0,1848,
#Partially deleted in new
chr22	39502376	39516178	chr22:39502376-39516178	1	+	39511294	39514323	0	7	61,332,150,151,178,263,2662,	0,1826,7045,8911,9472,9855,11140,
#Partially deleted in new
chr22	39502394	39511422	chr22:39502394-39511422	0	+	39511294	39511422	789624	4	43,332,234,135,	0,1808,6943,8893,
#Partially deleted in new
chr22	39502396	39513866	chr22:39502396-39513866	0	+	39511294	39512442	0	7	41,332,150,151,178,177,350,	0,1806,7025,8891,9452,9921,11120,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	39503456	39504510	chr22:39503456-39504510	0	+	39503456	39503456	8553170	3	64,182,308,	0,239,746,
#Deleted in new
chr22	39504230	39504443	chr22:39504230-39504443	3	+	39504230	39504443	0	1	213,	0,
#Deleted in new
chr22	39519694	39522683	chr22:39519694-39522683	3	+	39521445	39522602	0	4	107,574,318,911,	0,483,1659,2078,
#Deleted in new
chr22	39520563	39522683	chr22:39520563-39522683	1	+	39521445	39522602	0	2	1108,911,	0,1209,
#Deleted in new
chr22	39520563	39522685	chr22:39520563-39522685	1	+	39521445	39522602	0	3	188,318,913,	0,790,1209,
#Partially deleted in new
chr22	39529092	39532855	chr22:39529092-39532855	3	-	39529491	39532738	789624	4	531,98,129,169,	0,727,3302,3594,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	39529096	39532093	chr22:39529096-39532093	0	-	39529096	39529096	8553170	2	527,2274,	0,723,
#Partially deleted in new
chr22	39529213	39532738	chr22:39529213-39532738	0	-	39529213	39529213	8553170	3	410,98,344,	0,606,3181,
#Partially deleted in new
chr22	39529445	39532732	chr22:39529445-39532732	0	-	39529445	39529445	8553170	3	472,129,46,	0,2949,3241,
#Deleted in new
chr22	39531728	39532760	chr22:39531728-39532760	0	-	39531728	39531728	8553170	2	795,74,	0,958,
#Partially deleted in new
chr22	39570752	39685211	chr22:39570752-39685211	1	+	39570752	39684522	789624	36	236,112,134,98,160,316,93,313,105,425,152,186,118,156,94,203,471,101,124,69,185,127,126,90,193,152,110,134,71,79,122,339,147,123,166,910,	0,27398,29767,48557,63812,70114,72044,75816,77069,78748,87399,88178,88680,88944,89591,90355,91212,92023,92965,93338,93986,94745,95128,97539,99285,100050,101446,102196,103210,106588,107234,108354,108969,110177,111743,113549,
#Partially deleted in new
chr22	39570752	39689737	chr22:39570752-39689737	3	+	39570752	39686405	789624	37	236,112,134,98,160,316,93,313,105,425,152,186,118,156,94,203,471,101,124,69,185,127,126,90,193,152,110,134,71,79,122,339,147,123,166,197,3977,	0,27398,29767,48557,63812,70114,72044,75816,77069,78748,87399,88178,88680,88944,89591,90355,91212,92023,92965,93338,93986,94745,95128,97539,99285,100050,101446,102196,103210,106588,107234,108354,108969,110177,111743,113549,115008,
#Partially deleted in new
chr22	39570752	39689730	chr22:39570752-39689730	1	+	39570752	39686405	789624	36	236,112,134,98,160,316,93,313,425,152,186,118,156,94,203,471,101,124,69,185,127,126,90,193,152,110,134,71,79,122,339,147,123,166,197,3970,	0,27398,29767,48557,63812,70114,72044,75816,78748,87399,88178,88680,88944,89591,90355,91212,92023,92965,93338,93986,94745,95128,97539,99285,100050,101446,102196,103210,106588,107234,108354,108969,110177,111743,113549,115008,
#Partially deleted in new
chr22	39570752	39684528	chr22:39570752-39684528	1	+	39570752	39684522	789624	35	236,112,134,98,160,316,93,313,425,152,186,118,156,94,203,471,101,124,69,185,127,126,90,193,152,110,134,71,79,122,339,147,123,166,227,	0,27398,29767,48557,63812,70114,72044,75816,78748,87399,88178,88680,88944,89591,90355,91212,92023,92965,93338,93986,94745,95128,97539,99285,100050,101446,102196,103210,106588,107234,108354,108969,110177,111743,113549,
#Deleted in new
chr22	39642796	39643512	chr22:39642796-39643512	0	+	39642796	39642796	8553170	2	93,75,	0,641,
#Partially deleted in new
chr22	39743043	39893790	chr22:39743043-39893790	3	-	39743678	39887748	789624	7	1240,387,121,119,243,504,96,	0,22179,77949,92796,118721,144356,150651,
#Deleted in new
chr22	39750126	39751293	chr22:39750126-39751293	7	+	39750126	39750126	16724991	1	1167,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	39874254	39874515	chr22:39874254-39874515	3	-	39874254	39874254	8553170	1	261,	0,
#Deleted in new
chr22	39875288	39876108	chr22:39875288-39876108	7	+	39875288	39875288	16724991	1	820,	0,
#Deleted in new
chr22	39893214	39893864	chr22:39893214-39893864	0	-	39893214	39893214	8553170	2	284,170,	0,480,
#Partially deleted in new
chr22	39901081	39973721	chr22:39901081-39973721	3	+	39947106	39971084	0	8	249,92,92,120,169,231,123,2817,	0,46011,54737,58973,64908,66960,68329,69823,
#Partially deleted in new
chr22	39926590	39960175	chr22:39926590-39960175	0	+	39947106	39960175	789624	4	263,92,92,121,	0,20502,29228,33464,
#Partially deleted in new
chr22	39926602	39966109	chr22:39926602-39966109	0	+	39926602	39926602	8553170	4	251,92,120,120,	0,29216,33452,39387,
#Partially deleted in new
chr22	39926648	39948481	chr22:39926648-39948481	0	+	39926648	39926648	8553170	2	205,1389,	0,20444,
#Partially deleted in new
chr22	39946816	39971105	chr22:39946816-39971105	1	+	39947106	39971084	0	7	368,92,120,169,231,123,201,	0,9002,13238,19173,21225,22594,24088,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	39960396	39964718	chr22:39960396-39964718	3	+	39964374	39964569	789624	2	523,799,	0,3523,
#Partially deleted in new
chr22	39966049	39968696	chr22:39966049-39968696	0	+	39966049	39966049	8553170	2	109,655,	0,1992,
#Partially deleted in new
chr22	39969374	39971187	chr22:39969374-39971187	0	+	39969374	39969374	8553170	2	159,283,	0,1530,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	39994948	40043529	chr22:39994948-40043529	3	+	39995042	40029565	789624	5	583,168,122,674,14014,	0,24219,24938,26341,34567,
#Partially deleted in new
chr22	39995361	39999125	chr22:39995361-39999125	0	+	39995361	39995361	8553170	3	170,61,330,	0,2537,3434,
#Partially deleted in new
chr22	40009687	40030031	chr22:40009687-40030031	1	+	40019182	40029565	789624	5	437,168,122,674,516,	0,9480,10199,11602,19828,
#Deleted in new
chr22	40043067	40044530	chr22:40043067-40044530	3	-	40043067	40043067	8553170	1	1463,	0,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr22	40044816	40335807	chr22:40044816-40335807	1	+	40125817	40323241	789624	24	182,74,91,68,88,22,342,159,176,75,46,149,126,132,96,184,138,177,147,96,225,71,140,12954,	0,72238,80955,111298,201198,206362,217015,225305,228608,232260,233182,235178,240828,255638,256093,256333,263695,266000,267688,268085,270466,271125,276273,278037,
#Partially deleted in new
chr22	40044816	40156182	chr22:40044816-40156182	0	+	40125817	40156182	789624	4	182,74,91,68,	0,72238,80955,111298,
#Partially deleted in new
chr22	40045473	40323360	chr22:40045473-40323360	1	+	40125817	40323241	789624	24	115,74,91,68,88,22,342,159,176,75,46,149,126,132,96,184,138,177,147,96,225,71,140,507,	0,71581,80298,110641,200541,205705,216358,224648,227951,231603,232525,234521,240171,254981,255436,255676,263038,265343,267031,267428,269809,270468,275616,277380,
#Deleted in new
chr22	40106324	40107066	chr22:40106324-40107066	7	-	40106324	40106324	16724991	1	742,	0,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr22	40177924	40335807	chr22:40177924-40335807	1	+	40178135	40323241	789624	23	216,88,22,342,2349,159,176,75,46,149,171,126,132,96,184,138,177,147,96,225,71,140,12954,	0,68090,73254,83907,86763,92197,95500,99152,100074,102070,103194,107720,122530,122985,123225,130587,132892,134580,134977,137358,138017,143165,144929,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	40177924	40246362	chr22:40177924-40246362	0	+	40177924	40177924	8553170	2	216,348,	0,68090,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr22	40177941	40335808	chr22:40177941-40335808	3	+	40178135	40323241	789624	21	199,88,22,342,2349,176,75,46,149,126,132,96,184,138,177,147,96,225,71,140,12955,	0,68073,73237,83890,86746,95483,99135,100057,102053,107703,122513,122968,123208,130570,132875,134563,134960,137341,138000,143148,144912,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr22	40265002	40321799	chr22:40265002-40321799	0	+	40265002	40321233	789624	17	2034,159,176,75,46,149,126,132,96,184,138,177,147,96,225,71,710,	0,5119,8422,12074,12996,14992,20642,35452,35907,36147,43509,45814,47502,47899,50280,50939,56087,
#Partially deleted in new
chr22	40276839	40300498	chr22:40276839-40300498	0	+	40276839	40276839	8553170	6	142,75,46,149,126,44,	0,237,1159,3155,8805,23615,
#Deleted in new
chr22	40300855	40301495	chr22:40300855-40301495	0	+	40300855	40300855	8553170	2	150,346,	0,294,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	40346499	40369367	chr22:40346499-40369367	3	+	40346558	40366522	0	13	212,204,45,80,172,47,91,70,148,91,90,177,2932,	0,3332,6573,7748,12364,12760,13902,14773,14988,16481,17776,18380,19936,
#Partially deleted in new
chr22	40346499	40361313	chr22:40346499-40361313	0	+	40346558	40361313	789624	7	212,204,80,172,47,91,41,	0,3332,7748,12364,12760,13902,14773,
#Partially deleted in new
chr22	40346502	40366996	chr22:40346502-40366996	1	+	40346558	40366522	0	12	209,204,45,80,172,47,91,70,148,91,90,561,	0,3329,6570,7745,12361,12757,13899,14770,14985,16478,17773,19933,
#Partially deleted in new
chr22	40346513	40387476	chr22:40346513-40387476	1	+	40346558	40387230	789624	14	198,204,45,80,172,47,91,70,148,91,90,177,63,258,	0,3318,6559,7734,12350,12746,13888,14759,14974,16467,17762,18366,19922,40705,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	40346517	40350323	chr22:40346517-40350323	0	+	40346517	40346517	8553170	2	194,492,	0,3314,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	40346517	40352055	chr22:40346517-40352055	0	+	40346558	40350062	789624	3	194,435,125,	0,3314,5413,
#Partially deleted in new
chr22	40346523	40387489	chr22:40346523-40387489	0	+	40346558	40373357	789624	15	188,204,45,80,172,47,91,70,148,91,90,177,63,190,271,	0,3308,6549,7724,12340,12736,13878,14749,14964,16457,17752,18356,19912,26822,40695,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	40346527	40366614	chr22:40346527-40366614	1	+	40346558	40366522	789624	13	184,204,87,80,172,47,91,70,148,91,90,177,179,	0,3304,6805,7720,12336,12732,13874,14745,14960,16453,17748,18352,19908,
#Partially deleted in new
chr22	40346528	40359302	chr22:40346528-40359302	0	+	40346528	40346528	8553170	3	183,204,439,	0,3303,12335,
#Partially deleted in new
chr22	40346528	40361566	chr22:40346528-40361566	0	+	40358921	40361566	789624	8	128,45,80,172,47,91,70,79,	0,6544,7719,12335,12731,13873,14744,14959,
#Partially deleted in new
chr22	40346528	40364362	chr22:40346528-40364362	0	+	40346558	40364362	789624	11	183,204,45,80,172,47,91,70,148,112,87,	0,3303,6544,7719,12335,12731,13873,14744,14959,16452,17747,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr22	40346528	40410054	chr22:40346528-40410054	3	+	40346558	40349857	789624	31	183,250,204,172,47,91,70,148,91,90,177,63,118,83,67,209,108,144,196,146,225,55,128,156,55,50,153,71,579,61,373,	0,1868,3303,12335,12731,13873,14744,14959,16452,17747,18351,19907,54167,55064,55610,57718,58028,58612,59120,59549,59909,60488,60672,60884,61260,61542,61748,62098,62265,62936,63153,
#Partially deleted in new
chr22	40346529	40361577	chr22:40346529-40361577	0	+	40346558	40358956	789624	7	182,204,172,47,91,70,90,	0,3302,12334,12730,13872,14743,14958,
#Partially deleted in new
chr22	40346531	40360431	chr22:40346531-40360431	0	+	40346558	40358956	789624	6	180,204,45,172,47,30,	0,3300,6541,12332,12728,13870,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr22	40346554	40363014	chr22:40346554-40363014	0	+	40346558	40363014	789624	11	157,204,45,87,80,172,47,91,70,148,34,	0,3277,6518,6778,7693,12309,12705,13847,14718,14933,16426,
#Partially deleted in new
chr22	40347303	40358969	chr22:40347303-40358969	0	+	40347303	40347303	8553170	4	49,45,80,106,	0,5769,6944,11560,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	40348638	40358912	chr22:40348638-40358912	0	+	40348638	40348638	8553170	5	290,204,45,80,49,	0,1193,4434,5609,10225,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	40353823	40366489	chr22:40353823-40366489	0	+	40353823	40353823	8553170	10	504,172,47,91,70,148,91,90,177,54,	0,5040,5436,6578,7449,7664,9157,10452,11056,12612,
#Partially deleted in new
chr22	40354258	40366517	chr22:40354258-40366517	0	+	40354258	40366517	789624	10	69,172,47,91,70,190,91,90,177,82,	0,4605,5001,6143,7014,7229,8722,10017,10621,12177,
#Partially deleted in new
chr22	40358967	40363053	chr22:40358967-40363053	0	+	40358967	40361117	789624	6	68,47,91,255,179,73,	0,292,1434,2120,2520,4013,
#Partially deleted in new
chr22	40364557	40366556	chr22:40364557-40366556	0	+	40364557	40364557	8553170	2	499,121,	0,1878,
#Partially deleted in new
chr22	40364961	40368038	chr22:40364961-40368038	0	+	40364961	40367618	789624	3	95,63,570,	0,1474,2507,
#Partially deleted in new
chr22	40364961	40368105	chr22:40364961-40368105	0	+	40364961	40367618	789624	2	95,637,	0,2507,
#Partially deleted in new
chr22	40365030	40390463	chr22:40365030-40390463	0	+	40365030	40390313	789624	3	26,63,234,	0,1405,25199,
#Partially deleted in new
chr22	40370590	40406223	chr22:40370590-40406223	0	+	40404290	40406223	789624	8	98,118,67,209,108,144,196,146,	0,30105,31548,33656,33966,34550,35058,35487,
#Partially deleted in new
chr22	40370610	40410289	chr22:40370610-40410289	3	+	40400806	40409759	789624	22	78,118,83,67,209,108,144,196,146,225,55,128,156,55,50,153,71,49,86,123,61,608,	0,30085,30982,31528,33636,33946,34530,35038,35467,35827,36406,36590,36802,37178,37460,37666,38016,38183,38322,38639,38854,39071,
#Partially deleted in new
chr22	40370638	40410108	chr22:40370638-40410108	0	+	40370638	40370638	8553170	20	50,118,83,67,209,108,144,196,146,225,552,55,50,153,71,49,86,123,61,427,	0,30057,30954,31500,33608,33918,34502,35010,35439,35799,36378,37150,37432,37638,37988,38155,38294,38611,38826,39043,
#Partially deleted in new
chr22	40372663	40388290	chr22:40372663-40388290	0	-	40372663	40372663	8553170	2	286,146,	0,15481,
#Partially deleted in new
chr22	40372731	40388217	chr22:40372731-40388217	3	-	40372731	40372731	8553170	4	218,252,115,73,	0,3532,6620,15413,
#Deleted in new
chr22	40404112	40410103	chr22:40404112-40410103	0	+	40404112	40404112	8553170	9	343,108,144,196,146,1992,71,579,639,	0,444,1028,1536,1965,2325,4514,4681,5352,
#Deleted in new
chr22	40406112	40408409	chr22:40406112-40408409	0	+	40406112	40406112	8553170	7	111,225,55,368,55,50,133,	0,325,904,1088,1676,1958,2164,
#Deleted in new
chr22	40406437	40408429	chr22:40406437-40408429	0	+	40406437	40406437	8553170	6	225,312,156,55,50,153,	0,579,975,1351,1633,1839,
#Deleted in new
chr22	40407250	40407701	chr22:40407250-40407701	0	+	40407250	40407250	8553170	2	78,289,	0,162,
#Deleted in new
chr22	40407276	40409116	chr22:40407276-40409116	0	+	40407276	40407276	8553170	7	292,55,50,153,71,49,184,	0,512,794,1000,1350,1517,1656,
#Deleted in new
chr22	40407338	40408687	chr22:40407338-40408687	0	+	40407338	40407338	8553170	4	505,50,153,61,	0,732,938,1288,
#Deleted in new
chr22	40408312	40409811	chr22:40408312-40409811	0	+	40408312	40409657	789624	6	117,71,49,86,123,347,	0,314,481,620,937,1152,
#Deleted in new
chr22	40408387	40410047	chr22:40408387-40410047	0	+	40408387	40408387	8553170	6	42,71,49,440,61,366,	0,239,406,545,1077,1294,
#Deleted in new
chr22	40408626	40409785	chr22:40408626-40409785	0	+	40408626	40408626	8553170	4	71,49,440,321,	0,167,306,838,
#Deleted in new
chr22	40408793	40410118	chr22:40408793-40410118	0	+	40408793	40409759	789624	5	49,86,33,61,437,	0,139,546,671,888,
#Partially deleted in new
chr22	40410280	40636685	chr22:40410280-40636685	1	-	40411389	40463227	0	15	1627,61,153,1011,172,254,150,176,162,76,56,66,262,62,208,	0,6705,7060,8093,10124,10566,13255,13925,19325,21124,25218,52940,141825,184393,226197,
#Partially deleted in new
chr22	40410281	40636685	chr22:40410281-40636685	1	-	40411798	40463227	789624	15	1626,71,153,1011,172,254,150,176,162,76,56,66,262,62,208,	0,6694,7059,8092,10123,10565,13254,13924,19324,21123,25217,52939,141824,184392,226196,
#Partially deleted in new
chr22	40410281	40436310	chr22:40410281-40436310	1	-	40411798	40436310	789624	12	1626,71,153,1011,172,254,150,176,162,76,56,10,	0,6694,7059,8092,10123,10565,13254,13924,19324,21123,25217,26019,
#Partially deleted in new
chr22	40410281	40436310	chr22:40410281-40436310	1	-	40411389	40436310	789624	11	1626,61,153,1011,172,254,176,162,76,56,10,	0,6704,7059,8092,10123,10565,13924,19324,21123,25217,26019,
#Partially deleted in new
chr22	40410289	40636691	chr22:40410289-40636691	1	-	40411389	40463227	789624	14	1618,61,153,1011,172,254,176,162,76,56,66,262,62,214,	0,6696,7051,8084,10115,10557,13916,19316,21115,25209,52931,141816,184384,226188,
#Partially deleted in new
chr22	40410301	40463434	chr22:40410301-40463434	1	-	40411389	40463227	0	12	1606,61,153,1011,172,254,150,176,162,76,56,214,	0,6684,7039,8072,10103,10545,13234,13904,19304,21103,25197,52919,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	40411143	40552311	chr22:40411143-40552311	1	-	40411389	40411647	789624	2	1749,93,	0,141075,
#Partially deleted in new
chr22	40411389	40533635	chr22:40411389-40533635	3	-	40411389	40533635	789624	13	518,61,153,1011,172,254,150,176,162,76,56,66,46,	0,5596,5951,6984,9015,9457,12146,12816,18216,20015,24109,51831,122200,
#Partially deleted in new
chr22	40411838	40417734	chr22:40411838-40417734	0	-	40411838	40411838	8553170	3	69,61,394,	0,5147,5502,
#Deleted in new
chr22	40415002	40415445	chr22:40415002-40415445	3	+	40415002	40415002	8553170	1	443,	0,
#Partially deleted in new
chr22	40429350	40463418	chr22:40429350-40463418	1	-	40429420	40463227	789624	4	417,76,56,198,	0,2054,6148,33870,
#Partially deleted in new
chr22	40431404	40533811	chr22:40431404-40533811	0	-	40431404	40519485	789624	5	76,56,66,149,222,	0,4094,31816,88059,102185,
#Partially deleted in new
chr22	40433135	40433641	chr22:40433135-40433641	7	+	40433135	40433135	16724991	2	189,166,	0,340,
#Partially deleted in new
chr22	40463227	40636687	chr22:40463227-40636687	0	-	40463227	40463227	8553170	3	59,262,210,	0,88878,173250,
#Partially deleted in new
chr22	40519584	40636702	chr22:40519584-40636702	0	-	40519584	40519584	8553170	4	28,262,62,225,	0,32521,75089,116893,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	40521799	40526707	chr22:40521799-40526707	3	+	40521799	40521799	789624	4	1174,75,194,489,	0,1566,1725,4419,
#Partially deleted in new
chr22	40569285	40569895	chr22:40569285-40569895	7	+	40569285	40569285	16724991	2	147,113,	0,497,
#Deleted in new
chr22	40586699	40588003	chr22:40586699-40588003	7	-	40586699	40586699	16724991	1	1304,	0,
#Partially deleted in new
chr22	40673483	40674451	chr22:40673483-40674451	7	-	40673483	40673483	16724991	1	968,	0,
#Deleted in new
chr22	40678749	40682814	chr22:40678749-40682814	3	+	40679445	40681928	789624	2	985,1866,	0,2199,
#Deleted in new
chr22	40679272	40682083	chr22:40679272-40682083	1	+	40679445	40681928	789624	3	462,176,581,	0,1676,2230,
#Deleted in new
chr22	40679272	40682083	chr22:40679272-40682083	0	+	40679272	40679272	8553170	2	132,1135,	0,1676,
#Deleted in new
chr22	40680106	40681412	chr22:40680106-40681412	0	+	40680106	40680106	8553170	2	110,464,	0,842,
#Partially deleted in new
chr22	40769629	40819330	chr22:40769629-40819330	0	-	40779115	40819248	789624	8	1352,83,96,146,117,67,61,136,	0,4307,7410,7598,9379,24884,29393,49565,
#Partially deleted in new
chr22	40769629	40819382	chr22:40769629-40819382	3	-	40770833	40819248	789624	9	1352,83,96,146,117,152,67,61,188,	0,4307,7410,7598,9379,22895,24884,29393,49565,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr22	40769629	40819338	chr22:40769629-40819338	0	-	40769629	40769629	789624	11	1352,83,96,146,117,137,152,67,61,175,144,	0,4307,7410,7598,9379,10128,22895,24884,29393,47573,49565,
#Partially deleted in new
chr22	40769629	40819399	chr22:40769629-40819399	1	-	40770833	40819248	789624	7	1352,83,96,146,117,61,205,	0,4307,7410,7598,9379,29393,49565,
#Partially deleted in new
chr22	40770087	40780194	chr22:40770087-40780194	1	-	40770833	40779213	789624	5	894,83,96,146,1186,	0,3849,6952,7140,8921,
#Partially deleted in new
chr22	40770488	40819350	chr22:40770488-40819350	0	-	40792598	40819248	789624	7	493,83,96,146,117,152,156,	0,3448,6551,6739,8520,22036,48706,
#Partially deleted in new
chr22	40770894	40819326	chr22:40770894-40819326	0	-	40776281	40819248	789624	10	87,83,119,96,146,117,152,67,61,132,	0,3042,5295,6145,6333,8114,21630,23619,28128,48300,
#Partially deleted in new
chr22	40773936	40819316	chr22:40773936-40819316	0	-	40792598	40819248	789624	7	83,96,146,117,152,18,122,	0,3103,3291,5072,18588,25086,45258,
#Partially deleted in new
chr22	40777059	40819367	chr22:40777059-40819367	0	-	40792644	40819248	789624	7	76,146,117,152,67,18,173,	0,168,1949,15465,17454,21963,42135,
#Partially deleted in new
chr22	40777227	40819399	chr22:40777227-40819399	0	-	40797313	40819248	789624	7	146,117,152,67,53,61,205,	0,1781,15297,17286,20056,21795,41967,
#Partially deleted in new
chr22	40777298	40819380	chr22:40777298-40819380	0	-	40797313	40819248	789624	6	75,117,71,83,61,186,	0,1710,15226,19955,21724,41896,
#Partially deleted in new
chr22	40777337	40819389	chr22:40777337-40819389	0	-	40792644	40819248	789624	5	36,117,152,61,195,	0,1671,15187,21685,41857,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	40777359	40819332	chr22:40777359-40819332	0	-	40779104	40819248	789624	7	14,117,92,152,67,61,138,	0,1649,7153,15165,17154,21663,41835,
#Partially deleted in new
chr22	40779033	40819337	chr22:40779033-40819337	0	-	40797313	40819248	789624	6	92,152,67,83,61,143,	0,13491,15480,18220,19989,40161,
#Deleted in new
chr22	40779061	40780255	chr22:40779061-40780255	0	-	40779061	40779061	8553170	2	64,498,	0,696,
#Partially deleted in new
chr22	40779077	40819346	chr22:40779077-40819346	0	-	40797313	40819248	789624	6	48,152,67,53,61,152,	0,13447,15436,18206,19945,40117,
#Deleted in new
chr22	40788776	40789267	chr22:40788776-40789267	7	-	40788776	40788776	16724991	1	491,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	40792531	40819375	chr22:40792531-40819375	0	-	40792531	40799563	789624	5	145,67,61,111,181,	0,1982,6491,7029,26663,
#Partially deleted in new
chr22	40798038	40798285	chr22:40798038-40798285	7	+	40798038	40798038	16724991	1	247,	0,
#Partially deleted in new
chr22	40813882	40813958	chr22:40813882-40813958	3	-	40813882	40813882	5263520	1	76,	0,
#Partially deleted in new
chr22	40824534	40857022	chr22:40824534-40857022	3	-	40826537	40856540	0	12	2132,134,49,117,103,111,85,67,71,76,58,592,	0,2561,5091,6305,8034,11025,11268,16091,20304,23759,26288,31896,
#Partially deleted in new
chr22	40826420	40856565	chr22:40826420-40856565	1	-	40827132	40856540	789624	10	246,48,47,111,85,67,71,76,58,135,	0,675,6204,9139,9382,14205,18418,21873,24402,30010,
#Partially deleted in new
chr22	40827149	40835905	chr22:40827149-40835905	0	-	40827149	40827149	8553170	4	80,49,117,346,	0,2476,3690,8410,
#Partially deleted in new
chr22	40827220	40856616	chr22:40827220-40856616	0	-	40844902	40856540	789624	9	9,49,117,103,111,85,67,71,186,	0,2405,3619,5348,8339,8582,13405,17618,29210,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	40830874	40844890	chr22:40830874-40844890	0	-	40832195	40844890	789624	7	82,130,103,111,85,67,52,	0,1212,1694,4685,4928,9751,13964,
#Partially deleted in new
chr22	40832651	40854598	chr22:40832651-40854598	0	-	40832651	40850879	789624	8	20,111,85,67,71,76,58,61,	0,2908,3151,7974,12187,15642,18171,21886,
#Deleted in new
chr22	40835392	40835949	chr22:40835392-40835949	0	-	40835392	40835392	8553170	2	278,147,	0,410,
#Partially deleted in new
chr22	40857076	40870343	chr22:40857076-40870343	0	+	40857076	40857076	8553170	3	169,117,296,	0,11922,12971,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	40857096	40862770	chr22:40857096-40862770	0	+	40857096	40857096	8553170	3	149,116,1153,	0,3581,4521,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	40857097	40932815	chr22:40857097-40932815	3	+	40857181	40926435	0	10	148,117,408,203,63,114,86,181,121,6547,	0,11901,24672,29215,50489,52024,57141,65235,67264,69171,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	40857119	40860781	chr22:40857119-40860781	1	+	40857181	40860781	789624	2	126,104,	0,3558,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr22	40857130	40927505	chr22:40857130-40927505	0	+	40857181	40870076	789624	11	115,117,92,408,203,63,114,86,181,121,1237,	0,11868,12917,24639,29182,50456,51991,57108,65202,67231,69138,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	40859548	40862126	chr22:40859548-40862126	3	-	40861064	40861994	789624	1	2578,	0,
#Partially deleted in new
chr22	40862265	40881924	chr22:40862265-40881924	0	+	40862265	40862265	8553170	3	414,117,155,	0,6733,19504,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	40917110	40917381	chr22:40917110-40917381	3	+	40917110	40917110	8553170	1	271,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	40917742	40917846	chr22:40917742-40917846	3	+	40917742	40917742	8553170	1	104,	0,
#Partially deleted in new
chr22	40951346	40964411	chr22:40951346-40964411	0	+	40951346	40951346	8553170	3	130,79,365,	0,2208,12700,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	40951358	40973309	chr22:40951358-40973309	3	+	40951398	40972488	0	5	118,79,71,86,834,	0,2196,12688,16440,21117,
#Partially deleted in new
chr22	40966200	40972662	chr22:40966200-40972662	0	+	40966200	40966200	8553170	2	1684,187,	0,6275,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	41045496	41045591	chr22:41045496-41045591	3	+	41045496	41045496	8553170	1	95,	0,
#Partially deleted in new
chr22	41064051	41064633	chr22:41064051-41064633	7	+	41064051	41064051	16724991	1	582,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	41065553	41065646	chr22:41065553-41065646	3	-	41065553	41065553	8553170	1	93,	0,
#Deleted in new
chr22	41074179	41075239	chr22:41074179-41075239	7	-	41074179	41074179	16724991	1	1060,	0,
#Partially deleted in new
chr22	41091785	41180079	chr22:41091785-41180079	3	+	41093004	41178956	0	31	1313,635,177,262,114,246,94,138,118,175,78,110,138,438,180,145,119,240,89,81,57,78,68,151,147,114,166,165,162,282,3307,	0,25401,34078,35701,38104,39602,44027,45867,48354,49262,54953,56051,57252,57975,60047,60420,63209,65383,66626,68856,70937,72267,74813,76663,76935,77717,78620,80713,81837,84461,84987,
#Deleted in new
chr22	41092512	41092566	chr22:41092512-41092566	3	+	41092512	41092512	5263520	1	54,	0,
#Partially deleted in new
chr22	41108024	41117212	chr22:41108024-41117212	0	+	41108024	41108024	8553170	2	74,26,	0,9162,
#Partially deleted in new
chr22	41117770	41126308	chr22:41117770-41126308	0	+	41117770	41117770	8553170	2	51,445,	0,8093,
#Partially deleted in new
chr22	41125851	41127725	chr22:41125851-41127725	0	+	41125851	41125851	8553170	2	189,239,	0,1635,
#Partially deleted in new
chr22	41131532	41146809	chr22:41131532-41146809	0	+	41131532	41146809	789624	5	101,94,118,175,71,	0,4280,8607,9515,15206,
#Partially deleted in new
chr22	41141047	41149153	chr22:41141047-41149153	0	+	41141047	41149153	789624	3	175,110,116,	0,6789,7990,
#Partially deleted in new
chr22	41146552	41147890	chr22:41146552-41147890	0	+	41146552	41146552	8553170	2	264,54,	0,1284,
#Deleted in new
chr22	41148818	41149891	chr22:41148818-41149891	0	+	41148818	41148818	8553170	2	357,131,	0,942,
#Partially deleted in new
chr22	41157199	41158604	chr22:41157199-41158604	0	+	41157199	41157199	8553170	2	209,193,	0,1212,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	41158467	41160419	chr22:41158467-41160419	0	+	41158467	41158467	8553170	1	1952,	0,
#Partially deleted in new
chr22	41162726	41169329	chr22:41162726-41169329	0	+	41162726	41162726	8553170	6	53,78,68,151,147,47,	0,1326,3872,5722,5994,6556,
#Deleted in new
chr22	41168216	41168316	chr22:41168216-41168316	3	+	41168216	41168216	8553170	1	100,	0,
#Partially deleted in new
chr22	41169189	41183144	chr22:41169189-41183144	3	-	41169189	41169189	8553170	3	215,60,82,	0,332,13873,
#Partially deleted in new
chr22	41174590	41197456	chr22:41174590-41197456	3	-	41174590	41174590	8553170	3	234,40,183,	0,20891,22683,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	41176058	41176915	chr22:41176058-41176915	0	+	41176058	41176058	8553170	2	470,143,	0,714,
#Deleted in new
chr22	41189726	41190188	chr22:41189726-41190188	7	-	41189726	41189726	16724991	1	462,	0,
#Partially deleted in new
chr22	41205204	41231271	chr22:41205204-41231271	3	+	41205362	41230251	0	17	182,238,134,124,80,118,135,89,232,77,105,148,83,235,66,117,1133,	0,4491,8688,10934,11918,14214,15529,15994,18815,19520,19762,20589,21457,21884,22599,24335,24934,
#Partially deleted in new
chr22	41205281	41227810	chr22:41205281-41227810	0	+	41205281	41205281	8553170	14	105,238,176,124,80,118,135,89,232,77,105,148,83,722,	0,4414,8569,10857,11841,14137,15452,15917,18738,19443,19685,20512,21380,21807,
#Partially deleted in new
chr22	41205308	41230654	chr22:41205308-41230654	0	+	41205308	41205308	8553170	16	78,238,134,124,80,118,135,89,232,77,105,148,83,781,117,516,	0,4387,8584,10830,11814,14110,15425,15890,18711,19416,19658,20485,21353,21780,24231,24830,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	41205311	41210008	chr22:41205311-41210008	0	+	41205362	41208413	789624	3	75,143,313,	0,3003,4384,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr22	41205320	41231270	chr22:41205320-41231270	0	+	41205320	41205320	8553170	15	66,238,134,124,2414,135,89,232,77,105,148,83,781,117,1132,	0,4375,8572,10818,11802,15413,15878,18699,19404,19646,20473,21341,21768,24219,24818,
#Partially deleted in new
chr22	41205323	41231271	chr22:41205323-41231271	0	+	41205362	41227597	0	18	63,238,134,124,80,118,135,89,232,77,105,148,83,235,105,66,117,1133,	0,4372,8569,10815,11799,14095,15410,15875,18696,19401,19643,20470,21338,21765,22251,22480,24216,24815,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	41209121	41217627	chr22:41209121-41217627	3	-	41209121	41209121	789624	3	830,1074,596,	0,4508,7910,
#Partially deleted in new
chr22	41209681	41217623	chr22:41209681-41217623	0	-	41209681	41209681	8553170	3	270,279,231,	0,7350,7711,
#Partially deleted in new
chr22	41209695	41221367	chr22:41209695-41221367	0	+	41209695	41221367	789624	6	238,124,80,118,135,169,	0,6443,7427,9723,11038,11503,
#Partially deleted in new
chr22	41209695	41224165	chr22:41209695-41224165	0	+	41209695	41220856	789624	7	238,134,124,80,135,89,146,	0,4197,6443,7427,11038,11503,14324,
#Partially deleted in new
chr22	41229509	41239621	chr22:41229509-41239621	0	-	41229703	41239621	789624	5	221,52,86,1710,179,	0,5635,7055,7666,9933,
#Partially deleted in new
chr22	41229512	41240934	chr22:41229512-41240934	3	-	41229703	41240881	789624	6	218,199,167,1710,178,61,	0,5632,6971,7663,9930,11361,
#Partially deleted in new
chr22	41235139	41240894	chr22:41235139-41240894	0	-	41235139	41240894	789624	4	204,167,309,78,	0,1344,2036,5677,
#Partially deleted in new
chr22	41245610	41286251	chr22:41245610-41286251	3	-	41246602	41281044	0	16	1062,122,89,103,120,187,85,100,114,159,135,180,60,128,150,266,	0,3719,4118,5396,7261,8697,10410,10580,11100,12337,15835,19053,22486,28989,35322,40375,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr22	41245610	41285965	chr22:41245610-41285965	1	-	41246602	41281044	0	17	1062,122,89,103,120,187,85,100,114,159,135,180,60,128,150,253,422,	0,3719,4118,5396,7261,8697,10410,10580,11100,12337,15835,19053,22486,28989,35322,39290,39933,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr22	41245614	41282514	chr22:41245614-41282514	1	-	41246602	41281044	0	15	1058,122,89,103,120,187,85,100,114,159,135,180,60,128,1582,	0,3715,4114,5392,7257,8693,10406,10576,11096,12333,15831,19049,22482,28985,35318,
#Deleted in new
chr22	41252991	41253050	chr22:41252991-41253050	3	-	41252991	41252991	5263520	1	59,	0,
#Partially deleted in new
chr22	41256020	41274660	chr22:41256020-41274660	0	-	41256020	41274660	789624	7	85,100,114,159,180,60,61,	0,170,690,1927,8643,12076,18579,
#Partially deleted in new
chr22	41264743	41281621	chr22:41264743-41281621	0	-	41264743	41281044	789624	5	100,60,128,150,165,	0,3353,9856,16189,16713,
#Partially deleted in new
chr22	41268096	41281638	chr22:41268096-41281638	0	-	41268096	41281044	789624	4	60,128,280,182,	0,6503,12836,13360,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	41280932	41285905	chr22:41280932-41285905	0	-	41280932	41281044	789624	3	150,253,543,	0,3968,4430,
#Partially deleted in new
chr22	41301521	41360147	chr22:41301521-41360147	3	+	41320660	41357429	789624	23	251,59,34,198,159,81,57,43,191,322,59,100,162,206,101,182,86,134,106,109,134,164,2971,	0,19133,24042,24199,25684,28501,30649,36791,37479,38294,39566,41007,41893,44481,46545,47598,50039,53947,54235,54432,54821,55123,55655,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	41301714	41336843	chr22:41301714-41336843	0	+	41301714	41301714	8553170	7	58,59,34,198,159,81,4673,	0,18940,23849,24006,25491,28308,30456,
#Partially deleted in new
chr22	41367332	41399324	chr22:41367332-41399324	1	+	41367532	41395960	789624	4	267,318,221,3580,	0,20018,26763,28412,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	41377176	41377283	chr22:41377176-41377283	3	-	41377176	41377176	8553170	1	107,	0,
#Partially deleted in new
chr22	41381928	41399326	chr22:41381928-41399326	3	+	41382044	41395960	789624	4	273,318,221,3582,	0,5422,12167,13816,
#Partially deleted in new
chr22	41382934	41394274	chr22:41382934-41394274	0	+	41382934	41394274	789624	3	54,318,179,	0,4416,11161,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	41430933	41431375	chr22:41430933-41431375	3	+	41430933	41430933	8553170	1	442,	0,
#Partially deleted in new
chr22	41433491	41447023	chr22:41433491-41447023	3	-	41436310	41437345	789624	2	3916,645,	0,12887,
#Partially deleted in new
chr22	41437041	41446785	chr22:41437041-41446785	0	-	41437041	41437345	789624	2	366,411,	0,9333,
#Partially deleted in new
chr22	41459716	41468725	chr22:41459716-41468725	3	-	41460397	41468653	0	4	771,167,24,124,	0,7731,8407,8885,
#Partially deleted in new
chr22	41460302	41468625	chr22:41460302-41468625	0	-	41460302	41460302	8553170	4	185,167,128,24,	0,7145,7717,8299,
#Partially deleted in new
chr22	41460431	41468499	chr22:41460431-41468499	0	-	41460431	41460431	8553170	4	56,167,24,45,	0,7016,7692,8023,
#Partially deleted in new
chr22	41469124	41528989	chr22:41469124-41528989	3	+	41469146	41528613	789624	18	58,137,259,93,159,151,105,92,106,158,74,112,123,156,192,133,122,511,	0,30601,38666,42751,46252,46642,48402,49356,51046,53705,54080,54705,55721,56068,57137,58163,58776,59354,
#Partially deleted in new
chr22	41469129	41528989	chr22:41469129-41528989	1	+	41469146	41528613	789624	18	53,137,259,93,159,226,105,92,106,158,74,112,123,156,192,133,122,511,	0,30596,38661,42746,46247,46637,48397,49351,51041,53700,54075,54700,55716,56063,57132,58158,58771,59349,
#Partially deleted in new
chr22	41469159	41511966	chr22:41469159-41511966	0	+	41469159	41469159	8553170	3	349,259,91,	0,38631,42716,
#Partially deleted in new
chr22	41507837	41512287	chr22:41507837-41512287	0	+	41507837	41507837	8553170	2	212,412,	0,4038,
#Partially deleted in new
chr22	41508014	41516123	chr22:41508014-41516123	0	+	41508014	41508014	8553170	4	35,93,159,357,	0,3861,7362,7752,
#Partially deleted in new
chr22	41515512	41517452	chr22:41515512-41517452	0	+	41515512	41515512	8553170	3	23,151,156,	0,254,1784,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	41515765	41521590	chr22:41515765-41521590	0	+	41515765	41515765	8553170	5	152,105,92,106,292,	0,1761,2715,4405,5533,
#Partially deleted in new
chr22	41525803	41544489	chr22:41525803-41544489	3	-	41529282	41544101	789624	7	3533,202,64,87,97,131,62,	0,4883,6290,6855,14895,18187,18624,
#Partially deleted in new
chr22	41525825	41544445	chr22:41525825-41544445	1	-	41529282	41544101	789624	6	3511,202,64,87,97,455,	0,4861,6268,6833,14873,18165,
#Partially deleted in new
chr22	41528841	41544462	chr22:41528841-41544462	1	-	41529282	41544101	789624	5	495,202,64,97,472,	0,1845,3252,11857,15149,
#Partially deleted in new
chr22	41528842	41544455	chr22:41528842-41544455	0	-	41532135	41544101	789624	6	494,202,64,142,97,465,	0,1844,3251,3761,11856,15148,
#Partially deleted in new
chr22	41528864	41544427	chr22:41528864-41544427	0	-	41532709	41544101	789624	6	472,202,64,87,97,676,	0,1822,3229,3794,11834,14887,
#Partially deleted in new
chr22	41529211	41544606	chr22:41529211-41544606	1	-	41529282	41544101	789624	7	125,202,64,87,97,131,96,	0,1475,2882,3447,11487,14779,15299,
#Partially deleted in new
chr22	41532118	41544460	chr22:41532118-41544460	0	-	41533682	41544101	789624	6	39,87,166,97,131,33,	0,540,1403,8580,11872,12309,
#Partially deleted in new
chr22	41532624	41544386	chr22:41532624-41544386	0	-	41532624	41532624	8553170	2	121,396,	0,11366,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	41539142	41544472	chr22:41539142-41544472	0	-	41539142	41539142	8553170	3	1653,131,45,	0,4848,5285,
#Partially deleted in new
chr22	41560762	41576666	chr22:41560762-41576666	3	+	41571965	41574895	789624	4	421,299,123,1934,	0,11080,12892,13970,
#Partially deleted in new
chr22	41572016	41577741	chr22:41572016-41577741	0	+	41572016	41577476	789624	3	125,123,473,	0,1638,5252,
#Partially deleted in new
chr22	41576893	41589890	chr22:41576893-41589890	3	-	41577317	41589805	0	8	547,116,76,100,92,77,118,172,	0,914,1912,7065,7387,7633,9182,12825,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	41576902	41580689	chr22:41576902-41580689	0	-	41576902	41576902	8553170	3	538,116,1884,	0,905,1903,
#Partially deleted in new
chr22	41576902	41585402	chr22:41576902-41585402	0	-	41576902	41576902	8553170	5	538,116,76,414,876,	0,905,1903,7056,7624,
#Partially deleted in new
chr22	41576930	41589871	chr22:41576930-41589871	0	-	41576930	41576930	8553170	8	510,116,76,414,77,118,112,153,	0,877,1875,7028,7596,9145,12121,12788,
#Partially deleted in new
chr22	41576936	41589818	chr22:41576936-41589818	0	-	41576936	41576936	8553170	7	504,116,76,414,77,118,100,	0,871,1869,7022,7590,9139,12782,
#Partially deleted in new
chr22	41583982	41589796	chr22:41583982-41589796	0	-	41583982	41583982	8553170	6	76,92,77,118,134,78,	0,298,544,2093,2314,5736,
#Partially deleted in new
chr22	41584005	41589825	chr22:41584005-41589825	0	-	41584005	41584005	8553170	3	598,118,107,	0,2070,5713,
#Partially deleted in new
chr22	41584019	41589847	chr22:41584019-41589847	0	-	41586185	41589805	789624	6	39,92,77,118,112,129,	0,261,507,2056,5032,5699,
#Partially deleted in new
chr22	41586105	41589829	chr22:41586105-41589829	0	-	41586105	41586105	8553170	2	88,778,	0,2946,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	41598027	41621096	chr22:41598027-41621096	3	-	41601096	41620839	0	6	3163,123,110,70,22,345,	0,5231,6016,9234,9812,22724,
#Partially deleted in new
chr22	41600892	41602523	chr22:41600892-41602523	0	-	41600892	41600892	8553170	2	298,100,	0,1531,
#Deleted in new
chr22	41602000	41604225	chr22:41602000-41604225	0	-	41602000	41602000	8553170	3	783,123,182,	0,1258,2043,
#Deleted in new
chr22	41602974	41604087	chr22:41602974-41604087	0	-	41602974	41602974	8553170	2	407,44,	0,1069,
#Partially deleted in new
chr22	41621118	41664039	chr22:41621118-41664039	3	+	41622004	41663815	0	13	227,97,113,139,255,184,187,169,162,130,101,114,418,	0,871,6999,14994,15397,16489,25777,29604,32410,35784,37133,40212,42503,
#Partially deleted in new
chr22	41621162	41664048	chr22:41621162-41664048	1	+	41622041	41663815	789624	12	183,97,139,255,184,187,169,162,130,101,114,427,	0,827,14950,15353,16445,25733,29560,32366,35740,37089,40168,42459,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	41621284	41628318	chr22:41621284-41628318	0	+	41621284	41621284	8553170	3	61,97,201,	0,705,6833,
#Partially deleted in new
chr22	41621294	41664048	chr22:41621294-41664048	1	+	41622004	41663815	0	13	51,97,113,16,255,184,187,169,162,130,101,114,427,	0,695,6823,14941,15221,16313,25601,29428,32234,35608,36957,40036,42327,
#Partially deleted in new
chr22	41621349	41664039	chr22:41621349-41664039	1	+	41622004	41663815	0	12	737,113,139,255,184,187,169,162,130,101,114,418,	0,6768,14763,15166,16258,25546,29373,32179,35553,36902,39981,42272,
#Partially deleted in new
chr22	41621460	41664039	chr22:41621460-41664039	1	+	41622004	41663815	0	13	131,97,113,139,255,184,187,169,162,130,101,114,418,	0,529,6657,14652,15055,16147,25435,29262,32068,35442,36791,39870,42161,
#Partially deleted in new
chr22	41621982	41664034	chr22:41621982-41664034	1	+	41622041	41663815	789624	11	104,139,255,184,187,169,162,130,101,114,413,	0,14130,14533,15625,24913,28740,31546,34920,36269,39348,41639,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	41648088	41648190	chr22:41648088-41648190	3	-	41648088	41648088	8553170	1	102,	0,
#Partially deleted in new
chr22	41656952	41661699	chr22:41656952-41661699	0	+	41656952	41656952	8553170	3	80,101,369,	0,1299,4378,
#Partially deleted in new
chr22	41673929	41688909	chr22:41673929-41688909	3	-	41674932	41688796	0	3	1266,121,116,	0,6314,14864,
#Partially deleted in new
chr22	41673932	41688867	chr22:41673932-41688867	1	-	41674932	41688796	0	3	1263,121,74,	0,6311,14861,
#Partially deleted in new
chr22	41673933	41676323	chr22:41673933-41676323	0	-	41673933	41673933	8553170	2	1262,78,	0,2312,
#Partially deleted in new
chr22	41674614	41688895	chr22:41674614-41688895	1	-	41674932	41682358	789624	4	581,121,232,102,	0,5629,7741,14179,
#Partially deleted in new
chr22	41674706	41682622	chr22:41674706-41682622	1	-	41674932	41682358	0	3	489,121,267,	0,5537,7649,
#Partially deleted in new
chr22	41674788	41688804	chr22:41674788-41688804	1	-	41674932	41675154	8553170	4	407,121,249,11,	0,5455,13290,14005,
#Partially deleted in new
chr22	41674816	41690462	chr22:41674816-41690462	1	-	41674932	41690449	8553170	5	379,121,232,188,28,	0,5427,7539,13977,15618,
#Partially deleted in new
chr22	41674816	41688825	chr22:41674816-41688825	1	-	41674932	41675154	8553170	4	379,121,176,32,	0,5427,13335,13977,
#Partially deleted in new
chr22	41674924	41690504	chr22:41674924-41690504	1	-	41674932	41690449	789624	3	271,121,70,	0,5319,15510,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	41675030	41688799	chr22:41675030-41688799	0	-	41675030	41675154	8553170	4	165,121,606,6,	0,5213,12691,13763,
#Partially deleted in new
chr22	41675032	41690504	chr22:41675032-41690504	0	-	41680363	41690449	8553170	4	163,121,188,70,	0,5211,13761,15402,
#Partially deleted in new
chr22	41675151	41682456	chr22:41675151-41682456	0	-	41675151	41675151	8553170	4	44,121,334,101,	0,5092,6074,7204,
#Deleted in new
chr22	41676744	41677125	chr22:41676744-41677125	7	-	41676744	41676744	16724991	1	381,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	41687741	41688847	chr22:41687741-41688847	1	-	41688264	41688796	8553170	2	586,54,	0,1052,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	41688938	41693851	chr22:41688938-41693851	0	+	41688938	41688938	8553170	3	366,60,389,	0,1845,4524,
#Partially deleted in new
chr22	41690542	41698136	chr22:41690542-41698136	3	+	41690627	41693978	789624	2	301,4674,	0,2920,
#Partially deleted in new
chr22	41699498	41799454	chr22:41699498-41799454	3	+	41699538	41799299	789624	31	214,124,51,74,106,204,131,115,117,100,135,115,92,142,112,61,98,169,148,276,166,105,111,161,82,176,82,107,132,113,201,	0,3832,6005,14503,16542,18572,24444,30166,31022,32746,32970,43581,45474,46386,48608,53092,54450,58866,63675,71187,76603,79209,81785,82186,84840,85109,94330,94872,95912,96236,99755,
#Partially deleted in new
chr22	41699513	41767608	chr22:41699513-41767608	1	+	41723989	41767608	789624	20	199,124,51,74,106,204,131,115,117,100,135,115,92,142,112,61,98,169,148,33,	0,3817,5990,14488,16527,18557,24429,30151,31007,32731,32955,43566,45459,46371,48593,53077,54435,58851,63660,68062,
#Partially deleted in new
chr22	41709224	41709489	chr22:41709224-41709489	7	-	41709224	41709224	16724991	1	265,	0,
#Partially deleted in new
chr22	41722042	41722131	chr22:41722042-41722131	3	-	41722042	41722042	8553170	1	89,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	41747311	41747413	chr22:41747311-41747413	3	+	41747311	41747311	8553170	1	102,	0,
#Partially deleted in new
chr22	41752503	41770809	chr22:41752503-41770809	0	+	41752503	41752503	8553170	4	148,169,148,124,	0,5861,10670,18182,
#Partially deleted in new
chr22	41752516	41770706	chr22:41752516-41770706	0	+	41752516	41752516	8553170	5	135,98,169,148,21,	0,1432,5848,10657,18169,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	41753582	41758478	chr22:41753582-41758478	0	+	41753582	41753582	8553170	2	464,114,	0,4782,
#Partially deleted in new
chr22	41774179	41781737	chr22:41774179-41781737	0	+	41774179	41774179	8553170	5	319,166,105,111,53,	0,1922,4528,7104,7505,
#Partially deleted in new
chr22	41776046	41781363	chr22:41776046-41781363	0	+	41776046	41776046	8553170	3	221,170,80,	0,2661,5237,
#Partially deleted in new
chr22	41776048	41781824	chr22:41776048-41781824	0	+	41776048	41776048	8553170	4	219,105,111,140,	0,2659,5235,5636,
#Partially deleted in new
chr22	41776110	41784360	chr22:41776110-41784360	0	+	41776110	41776110	8553170	5	157,170,111,161,22,	0,2597,5173,5574,8228,
#Partially deleted in new
chr22	41781350	41799340	chr22:41781350-41799340	0	+	41781350	41781350	8553170	6	495,82,107,132,113,87,	0,12478,13020,14060,14384,17903,
#Partially deleted in new
chr22	41781398	41799305	chr22:41781398-41799305	0	+	41781398	41781398	8553170	8	447,82,176,82,107,132,113,52,	0,2940,3209,12430,12972,14012,14336,17855,
#Partially deleted in new
chr22	41781445	41795773	chr22:41781445-41795773	0	+	41781445	41781445	8553170	6	400,82,82,107,132,39,	0,2893,12383,12925,13965,14289,
#Partially deleted in new
chr22	41781734	41799456	chr22:41781734-41799456	0	+	41781734	41799299	789624	7	111,82,176,82,107,113,203,	0,2604,2873,12094,12636,14000,17519,
#Partially deleted in new
chr22	41795421	41799455	chr22:41795421-41799455	0	+	41795421	41799299	789624	3	31,113,202,	0,313,3832,
#Partially deleted in new
chr22	41800678	41826299	chr22:41800678-41826299	3	+	41808890	41825823	789624	7	88,119,122,85,182,72,602,	0,8196,9200,9528,12585,13072,25019,
#Partially deleted in new
chr22	41800678	41825893	chr22:41800678-41825893	1	+	41808890	41825823	789624	4	88,119,122,196,	0,8196,9200,25019,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	41831214	41834665	chr22:41831214-41834665	3	-	41831214	41831214	789624	2	2766,223,	0,3228,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr22	41833078	41907307	chr22:41833078-41907307	1	+	41866832	41880909	789624	20	280,450,182,147,222,115,182,193,182,100,277,170,169,118,110,133,169,186,112,1868,	0,33752,35532,37810,40719,42258,42464,44150,44863,45580,47637,51763,60038,61741,63973,65570,67251,69891,71784,72361,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr22	41833104	41907308	chr22:41833104-41907308	3	+	41833270	41905660	0	19	254,450,182,147,222,115,182,193,182,277,170,169,118,110,133,169,186,112,1869,	0,33726,35506,37784,40693,42232,42438,44124,44837,47611,51737,60012,61715,63947,65544,67225,69865,71758,72335,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr22	41833163	41907306	chr22:41833163-41907306	0	+	41833270	41880909	789624	22	195,450,182,147,222,115,182,193,182,100,277,170,169,118,110,133,317,103,169,186,112,1867,	0,33667,35447,37725,40634,42173,42379,44065,44778,45495,47552,51678,59953,61656,63888,65485,66073,66856,67166,69806,71699,72276,
#Partially deleted in new
chr22	41873688	41877396	chr22:41873688-41877396	0	+	41873688	41873688	8553170	4	331,115,182,168,	0,1648,1854,3540,
#Deleted in new
chr22	41875430	41877366	chr22:41875430-41877366	0	+	41875430	41875430	8553170	2	294,138,	0,1798,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	41885595	41907306	chr22:41885595-41907306	0	+	41885595	41885595	8553170	13	569,40,150,169,118,110,133,317,103,169,186,112,1867,	0,673,5654,7521,9224,11456,13053,13641,14424,14734,17374,19267,19844,
#Partially deleted in new
chr22	41897067	41899188	chr22:41897067-41899188	0	+	41897067	41897067	8553170	2	94,540,	0,1581,
#Partially deleted in new
chr22	41898675	41904973	chr22:41898675-41904973	0	+	41898675	41904973	789624	5	106,169,186,198,111,	0,1654,4294,5859,6187,
#Partially deleted in new
chr22	41900082	41903003	chr22:41900082-41903003	0	+	41900082	41900082	8553170	2	416,34,	0,2887,
#Deleted in new
chr22	41900943	41901012	chr22:41900943-41901012	3	+	41900943	41900943	5263520	1	69,	0,
#Partially deleted in new
chr22	41909553	41914667	chr22:41909553-41914667	3	-	41909764	41914667	789624	4	594,147,134,530,	0,854,1662,4584,
#Partially deleted in new
chr22	41911292	41914566	chr22:41911292-41914566	0	-	41911292	41914566	789624	2	57,429,	0,2845,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	41922022	41926818	chr22:41922022-41926818	3	-	41925366	41926773	0	3	3532,231,181,	0,4078,4615,
#Deleted in new
chr22	41923221	41923297	chr22:41923221-41923297	3	-	41923221	41923221	5263520	1	76,	0,
#Partially deleted in new
chr22	41938720	41947164	chr22:41938720-41947164	3	-	41939055	41947076	0	6	476,92,80,93,80,145,	0,4889,6504,7192,7696,8299,
#Partially deleted in new
chr22	41938736	41946693	chr22:41938736-41946693	1	-	41939055	41946451	789624	5	460,92,80,93,277,	0,4873,6488,7176,7680,
#Partially deleted in new
chr22	41938736	41946688	chr22:41938736-41946688	1	-	41939182	41946451	789624	4	460,80,93,272,	0,6488,7176,7680,
#Deleted in new
chr22	41938736	41940219	chr22:41938736-41940219	1	-	41939055	41940174	0	2	460,81,	0,1402,
#Partially deleted in new
chr22	41938748	41947136	chr22:41938748-41947136	1	-	41939182	41947076	0	5	448,80,93,80,117,	0,6476,7164,7668,8271,
#Partially deleted in new
chr22	41939171	41946729	chr22:41939171-41946729	1	-	41943616	41946451	789624	5	25,92,165,93,313,	0,4438,6053,6741,7245,
#Partially deleted in new
chr22	41944920	41947151	chr22:41944920-41947151	0	-	41944920	41944920	8553170	4	384,93,80,132,	0,992,1496,2099,
#Deleted in new
chr22	41946307	41947133	chr22:41946307-41947133	0	-	41946307	41946307	8553170	2	189,114,	0,712,
#Partially deleted in new
chr22	41952164	41957831	chr22:41952164-41957831	5	+	41952164	41952164	16724991	2	60,162,	0,5505,
#Partially deleted in new
chr22	41952173	41958933	chr22:41952173-41958933	7	+	41952173	41952173	16724991	2	248,1262,	0,5498,
#Partially deleted in new
chr22	41969474	41998221	chr22:41969474-41998221	1	+	41971492	41996967	789624	12	203,1523,192,129,82,138,118,96,100,52,94,1320,	0,1999,12170,16509,17731,18147,20092,22098,23189,24815,25146,27427,
#Partially deleted in new
chr22	41976271	41989589	chr22:41976271-41989589	0	+	41981673	41989589	789624	6	312,192,129,82,138,23,	0,5373,9712,10934,11350,13295,
#Partially deleted in new
chr22	41976809	41998221	chr22:41976809-41998221	3	+	41977064	41996967	0	11	265,192,129,82,138,118,96,100,52,94,1320,	0,4835,9174,10396,10812,12757,14763,15854,17480,17811,20092,
#Partially deleted in new
chr22	41976844	41997728	chr22:41976844-41997728	1	+	41977064	41996967	789624	10	230,129,82,138,118,96,100,52,94,827,	0,9139,10361,10777,12722,14728,15819,17445,17776,20057,
#Partially deleted in new
chr22	41976933	41998221	chr22:41976933-41998221	1	+	41977064	41994756	0	10	141,192,129,82,138,118,96,100,52,3601,	0,4711,9050,10272,10688,12633,14639,15730,17356,17687,
#Partially deleted in new
chr22	41977049	41998066	chr22:41977049-41998066	0	+	41977064	41987671	0	9	25,192,138,43,87,100,52,94,1165,	0,4595,10572,12517,14532,15614,17240,17571,19852,
#Deleted in new
chr22	41981303	41982217	chr22:41981303-41982217	3	-	41981303	41981303	8553170	3	252,193,70,	0,442,844,
#Partially deleted in new
chr22	41985641	41987689	chr22:41985641-41987689	0	+	41985641	41985641	8553170	3	471,82,68,	0,1564,1980,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	41998724	42032929	chr22:41998724-42032929	0	+	41998818	42027181	789624	8	156,109,142,93,108,497,88,2210,	0,20586,20937,21279,23524,28041,31214,31995,
#Partially deleted in new
chr22	41998724	42032769	chr22:41998724-42032769	0	+	41998818	42027181	789624	9	156,109,142,93,497,88,104,95,139,	0,20586,20937,21279,28041,31214,31995,33668,33906,
#Partially deleted in new
chr22	41998771	42058456	chr22:41998771-42058456	0	+	41998818	42027181	789624	9	109,109,142,93,108,497,88,104,167,	0,20539,20890,21232,23477,27994,31167,31948,59518,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	41998787	42028475	chr22:41998787-42028475	3	+	41998818	42027181	789624	6	93,109,142,93,108,1710,	0,20523,20874,21216,23461,27978,
#Partially deleted in new
chr22	41998787	42027040	chr22:41998787-42027040	0	+	41998787	41998787	8553170	4	93,93,108,275,	0,21216,23461,27978,
#Partially deleted in new
chr22	41998792	42026794	chr22:41998792-42026794	0	+	41998818	42020036	789624	6	88,109,48,93,108,29,	0,20518,20963,21211,23456,27973,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	41998792	42003463	chr22:41998792-42003463	0	+	41998792	41998792	8553170	4	88,238,179,804,	0,2307,2728,3867,
#Deleted in new
chr22	42001068	42001966	chr22:42001068-42001966	7	-	42001068	42001068	16724991	1	898,	0,
#Partially deleted in new
chr22	42019712	42032650	chr22:42019712-42032650	1	+	42019712	42027181	789624	7	91,93,108,497,88,104,20,	0,291,2536,7053,10226,11007,12918,
#Partially deleted in new
chr22	42027162	42032769	chr22:42027162-42032769	0	+	42027162	42027162	8553170	4	100,88,104,139,	0,2776,3557,5468,
#Partially deleted in new
chr22	42030545	42032931	chr22:42030545-42032931	0	+	42030545	42030545	8553170	2	278,301,	0,2085,
#Partially deleted in new
chr22	42058353	42070830	chr22:42058353-42070830	3	-	42060278	42070297	0	9	2060,144,198,162,95,178,172,136,549,	0,2570,4473,7384,8356,8759,9411,10085,11928,
#Partially deleted in new
chr22	42059795	42070830	chr22:42059795-42070830	1	-	42060278	42070297	0	10	618,144,198,162,95,178,172,136,85,68,	0,1128,3031,5942,6914,7317,7969,8643,10486,10967,
#Partially deleted in new
chr22	42059801	42070842	chr22:42059801-42070842	1	-	42060278	42070297	0	10	612,144,198,162,95,178,172,136,92,80,	0,1122,3025,5936,6908,7311,7963,8637,10480,10961,
#Partially deleted in new
chr22	42074250	42079441	chr22:42074250-42079441	3	+	42077293	42078073	789624	3	91,82,2162,	0,1320,3029,
#Partially deleted in new
chr22	42074356	42077618	chr22:42074356-42077618	0	+	42077293	42077618	789624	3	116,82,339,	0,1214,2923,
#Partially deleted in new
chr22	42079690	42083353	chr22:42079690-42083353	0	+	42079768	42081961	789624	3	215,141,235,	0,2234,3428,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	42079694	42084284	chr22:42079694-42084284	3	+	42079768	42082062	789624	3	260,141,1166,	0,2230,3424,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	42079699	42082225	chr22:42079699-42082225	0	+	42079699	42079699	8553170	2	255,301,	0,2225,
#Partially deleted in new
chr22	42085524	42090955	chr22:42085524-42090955	3	-	42086182	42090744	8553170	3	790,116,350,	0,1535,5081,
#Partially deleted in new
chr22	42085526	42090884	chr22:42085526-42090884	1	-	42086182	42090822	8553170	3	788,116,279,	0,1533,5079,
#Deleted in new
chr22	42086115	42087335	chr22:42086115-42087335	1	-	42086182	42087143	789624	2	199,276,	0,944,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	42089629	42090028	chr22:42089629-42090028	3	-	42089629	42089629	8553170	1	399,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	42090955	42125349	chr22:42090955-42125349	0	+	42090955	42090955	789624	4	226,304,516,475,	0,341,33091,33919,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	42090966	42124959	chr22:42090966-42124959	0	+	42090966	42090966	8553170	5	215,304,84,86,85,	0,330,33080,33510,33908,
#Deleted in new
chr22	42090966	42091596	chr22:42090966-42091596	0	+	42090966	42090966	8553170	2	215,295,	0,335,
#Partially deleted in new
chr22	42107764	42108953	chr22:42107764-42108953	7	-	42107764	42107764	16724991	1	1189,	0,
#Partially deleted in new
chr22	42118255	42124899	chr22:42118255-42124899	0	+	42118255	42118255	8553170	4	237,84,43,25,	0,5791,6264,6619,
#Partially deleted in new
chr22	42118325	42124899	chr22:42118325-42124899	0	+	42118325	42118325	8553170	3	167,516,25,	0,5721,6549,
#Partially deleted in new
chr22	42118346	42124899	chr22:42118346-42124899	0	+	42118346	42118346	8553170	5	146,66,84,43,25,	0,5179,5700,6173,6528,
#Partially deleted in new
chr22	42118346	42124562	chr22:42118346-42124562	0	+	42118346	42118346	8553170	3	146,93,516,	0,1689,5700,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	42121196	42124884	chr22:42121196-42124884	0	+	42121196	42121196	8553170	7	539,96,66,39,84,43,10,	0,1596,2329,2569,2850,3323,3678,
#Deleted in new
chr22	42123733	42125028	chr22:42123733-42125028	0	+	42123733	42123733	8553170	3	397,43,154,	0,786,1141,
#Deleted in new
chr22	42126498	42129909	chr22:42126498-42129909	0	-	42127901	42129909	789624	7	254,142,188,93,177,161,172,	0,352,948,1343,1675,2285,3239,
#Deleted in new
chr22	42126498	42130906	chr22:42126498-42130906	3	-	42126573	42130791	0	9	254,142,188,142,177,161,153,172,295,	0,352,948,1343,1675,2285,2534,3239,4113,
#Deleted in new
chr22	42126498	42130805	chr22:42126498-42130805	1	-	42126573	42130791	0	9	254,142,188,142,177,161,153,172,194,	0,352,948,1343,1675,2285,2534,3239,4113,
#Deleted in new
chr22	42126498	42130881	chr22:42126498-42130881	1	-	42126573	42130791	0	9	254,142,188,142,177,161,153,172,270,	0,352,948,1343,1675,2285,2534,3239,4113,
#Deleted in new
chr22	42126500	42130881	chr22:42126500-42130881	1	-	42126573	42130725	789624	10	252,142,216,29,142,177,161,153,172,270,	0,350,946,1280,1341,1673,2283,2532,3237,4111,
#Deleted in new
chr22	42126534	42130813	chr22:42126534-42130813	0	-	42126534	42126534	8553170	8	218,142,188,142,177,161,153,1076,	0,316,912,1307,1639,2249,2498,3203,
#Deleted in new
chr22	42126555	42130865	chr22:42126555-42130865	1	-	42126573	42130791	0	8	197,142,188,142,177,161,172,254,	0,295,891,1286,1618,2228,3182,4056,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	42132030	42135239	chr22:42132030-42135239	0	+	42132030	42132030	8553170	5	160,233,51,81,105,	0,339,1009,1299,3104,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	42132030	42137050	chr22:42132030-42137050	1	+	42132030	42132030	8553170	8	160,233,51,105,66,84,43,24,	0,339,1009,3104,3647,4168,4641,4996,
#Partially deleted in new
chr22	42132542	42132998	chr22:42132542-42132998	7	+	42132542	42132542	16724991	1	456,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	42136432	42139927	chr22:42136432-42139927	3	-	42136432	42136432	8553170	3	232,119,316,	0,1554,3179,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	42138059	42139726	chr22:42138059-42139726	3	+	42138059	42138059	8553170	2	223,408,	0,1259,
#Deleted in new
chr22	42140202	42144549	chr22:42140202-42144549	1	-	42140279	42144464	789624	9	254,142,188,142,177,161,153,172,266,	0,352,949,1331,1665,2276,2525,3207,4081,
#Deleted in new
chr22	42140202	42144577	chr22:42140202-42144577	1	-	42140279	42144464	8553170	9	254,142,245,142,177,161,153,172,294,	0,352,949,1331,1665,2276,2525,3207,4081,
#Deleted in new
chr22	42140202	42141924	chr22:42140202-42141924	0	-	42141309	42141924	789624	5	254,142,188,51,57,	0,352,949,1422,1665,
#Deleted in new
chr22	42140204	42144577	chr22:42140204-42144577	3	-	42140277	42144464	789624	11	252,142,216,26,142,177,161,153,172,45,248,	0,350,947,1166,1329,1663,2274,2523,3205,4079,4125,
#Deleted in new
chr22	42140204	42144554	chr22:42140204-42144554	1	-	42140277	42144464	789624	9	252,142,188,142,177,161,172,45,225,	0,350,947,1329,1663,2274,3205,4079,4125,
#Deleted in new
chr22	42141241	42144549	chr22:42141241-42144549	0	-	42141241	42141241	8553170	6	434,177,161,153,172,266,	0,626,1237,1486,2168,3042,
#Deleted in new
chr22	42142736	42143999	chr22:42142736-42143999	0	-	42142736	42142736	8553170	3	144,172,257,	0,673,1006,
#Deleted in new
chr22	42143283	42144549	chr22:42143283-42144549	0	-	42143283	42143283	8553170	2	298,266,	0,1000,
#Partially deleted in new
chr22	42149885	42155001	chr22:42149885-42155001	7	-	42149885	42149885	16724991	9	179,142,185,142,177,163,153,172,177,	0,277,869,1258,1586,2210,2461,3143,4939,
#Partially deleted in new
chr22	42160012	42215442	chr22:42160012-42215442	3	-	42168652	42215305	789624	5	1346,128,50,94,5792,	0,8596,9834,19596,49638,
#Partially deleted in new
chr22	42161055	42215440	chr22:42161055-42215440	1	-	42161340	42215305	789624	4	303,50,94,5790,	0,8791,18553,48595,
#Partially deleted in new
chr22	42161097	42210208	chr22:42161097-42210208	1	-	42168652	42210208	789624	5	261,95,50,94,558,	0,7511,8749,18511,48553,
#Partially deleted in new
chr22	42214846	42343616	chr22:42214846-42343616	0	-	42214846	42215305	789624	2	495,138,	0,128632,
#Partially deleted in new
chr22	42269752	42274862	chr22:42269752-42274862	1	+	42269752	42269752	789624	2	273,969,	0,4141,
#Partially deleted in new
chr22	42269759	42275196	chr22:42269759-42275196	0	+	42269759	42269759	8553170	2	266,209,	0,5228,
#Partially deleted in new
chr22	42269767	42275033	chr22:42269767-42275033	3	+	42269767	42269767	8553170	4	258,81,166,46,	0,4126,4888,5220,
#Partially deleted in new
chr22	42276354	42277052	chr22:42276354-42277052	3	+	42276354	42276354	8553170	2	188,357,	0,341,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	42278187	42278846	chr22:42278187-42278846	3	+	42278187	42278187	8553170	1	659,	0,
#Deleted in new
chr22	42364399	42369168	chr22:42364399-42369168	0	-	42364399	42364399	789624	2	326,454,	0,4315,
#Deleted in new
chr22	42364401	42369208	chr22:42364401-42369208	0	-	42364401	42364401	789624	2	324,151,	0,4656,
#Deleted in new
chr22	42364524	42369236	chr22:42364524-42369236	3	-	42364524	42364524	789624	2	620,522,	0,4190,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	42380409	42432395	chr22:42380409-42432395	3	-	42385160	42432357	789624	6	4811,90,99,113,330,159,	0,6579,17448,29025,30997,51827,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	42410276	42432362	chr22:42410276-42432362	0	-	42410447	42432357	789624	3	215,330,126,	0,1130,21960,
#Partially deleted in new
chr22	42438022	42446195	chr22:42438022-42446195	3	+	42438022	42438022	8553170	4	310,114,115,33,	0,2468,7679,8140,
#Partially deleted in new
chr22	42500578	42512559	chr22:42500578-42512559	7	+	42500578	42500578	16724991	10	114,150,114,418,75,110,83,94,112,442,	0,1046,1340,1772,2620,4454,8449,10052,11237,11539,
#Partially deleted in new
chr22	42500589	42512560	chr22:42500589-42512560	5	+	42500589	42500589	16724991	11	103,150,114,42,20,75,110,83,94,112,443,	0,1035,1329,1761,2159,2609,4443,8438,10041,11226,11528,
#Partially deleted in new
chr22	42500670	42512237	chr22:42500670-42512237	5	+	42500670	42500670	16724991	10	22,150,114,42,20,75,110,83,94,120,	0,954,1248,1680,2078,2528,4362,8357,9960,11447,
#Deleted in new
chr22	42501595	42502653	chr22:42501595-42502653	4	+	42501595	42501595	16724991	3	179,114,303,	0,323,755,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	42509967	42519802	chr22:42509967-42519802	3	-	42512909	42519786	789624	7	3028,199,98,118,126,143,89,	0,4138,4714,5183,6043,8037,9746,
#Partially deleted in new
chr22	42514676	42519794	chr22:42514676-42519794	0	-	42518639	42519786	789624	6	103,118,126,143,116,81,	0,474,1334,3328,3936,5037,
#Partially deleted in new
chr22	42515200	42519796	chr22:42515200-42519796	0	-	42515200	42515200	8553170	4	68,286,143,83,	0,810,2804,4513,
#Partially deleted in new
chr22	42553616	42558412	chr22:42553616-42558412	0	+	42555248	42558412	789624	7	97,150,114,42,20,75,65,	0,1321,1615,2047,2447,2897,4731,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr22	42553858	42574381	chr22:42553858-42574381	0	+	42554020	42571137	789624	11	184,150,114,42,20,75,110,80,781,94,446,	0,1079,1373,1805,2205,2655,4489,6327,17262,18577,20077,
#Partially deleted in new
chr22	42553861	42574381	chr22:42553861-42574381	1	+	42554020	42571199	789624	10	181,150,114,42,20,75,110,83,94,446,	0,1076,1370,1802,2202,2652,4486,17259,18574,20074,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	42553884	42571664	chr22:42553884-42571664	0	+	42553884	42553884	8553170	10	158,150,114,20,75,110,80,93,35,544,	0,1053,1347,2179,2629,4463,6301,9504,12419,17236,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr22	42553917	42573997	chr22:42553917-42573997	0	+	42554020	42556545	789624	11	125,150,114,42,36,75,110,80,781,94,62,	0,1020,1314,1746,2130,2596,4430,6268,17203,18518,20018,
#Partially deleted in new
chr22	42553918	42574382	chr22:42553918-42574382	3	+	42554020	42574055	789624	12	124,150,114,42,20,75,110,80,35,83,94,447,	0,1019,1313,1745,2145,2595,4429,6267,12385,17202,18517,20017,
#Partially deleted in new
chr22	42553934	42574381	chr22:42553934-42574381	0	+	42553934	42553934	8553170	10	108,150,114,420,75,110,83,94,112,446,	0,1003,1297,1729,2579,4413,17186,18501,19699,20001,
#Partially deleted in new
chr22	42554014	42574165	chr22:42554014-42574165	1	+	42554020	42574055	789624	7	28,14,37,35,83,94,230,	0,923,6214,12289,17106,18421,19921,
#Partially deleted in new
chr22	42554020	42574055	chr22:42554020-42574055	1	+	42554020	42574055	789624	10	22,114,20,75,110,80,35,83,94,120,	0,1211,2043,2493,4327,6165,12283,17100,18415,19915,
#Deleted in new
chr22	42554908	42555966	chr22:42554908-42555966	0	+	42554908	42554908	8553170	3	179,114,303,	0,323,755,
#Partially deleted in new
chr22	42555222	42582038	chr22:42555222-42582038	7	-	42555222	42555222	16724991	8	1452,139,196,98,118,119,143,110,	0,19457,20708,21289,21758,22621,24994,26706,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	42565047	42565330	chr22:42565047-42565330	3	-	42565047	42565047	8553170	1	283,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	42569128	42582009	chr22:42569128-42582009	4	-	42569128	42569128	16724991	8	884,139,196,98,118,119,143,81,	0,5551,6802,7383,7852,8715,11088,12800,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	42569146	42569250	chr22:42569146-42569250	3	-	42569146	42569146	8553170	1	104,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	42573243	42582011	chr22:42573243-42582011	4	-	42573243	42573243	16724991	7	1575,196,98,118,119,143,83,	0,2687,3268,3737,4600,6973,8685,
#Partially deleted in new
chr22	42574732	42582001	chr22:42574732-42582001	5	-	42574732	42574732	16724991	7	86,196,98,118,119,143,73,	0,1198,1779,2248,3111,5484,7196,
#Partially deleted in new
chr22	42577097	42581997	chr22:42577097-42581997	4	-	42577097	42577097	16724991	4	398,119,143,69,	0,746,3119,4831,
#Partially deleted in new
chr22	42583720	42614962	chr22:42583720-42614962	3	-	42585790	42614857	789624	9	2248,67,130,78,180,96,87,391,164,	0,3785,8234,11816,12465,15977,18249,19049,31078,
#Partially deleted in new
chr22	42583720	42614931	chr22:42583720-42614931	1	-	42585790	42614857	789624	8	2248,67,130,78,180,96,391,133,	0,3785,8234,11816,12465,15977,19049,31078,
#Partially deleted in new
chr22	42583720	42614869	chr22:42583720-42614869	0	-	42595570	42614857	789624	9	2248,67,130,67,180,96,87,391,71,	0,3785,8234,11816,12465,15977,18249,19049,31078,
#Partially deleted in new
chr22	42583721	42614962	chr22:42583721-42614962	1	-	42585790	42614857	789624	9	2247,67,130,78,180,96,138,391,164,	0,3784,8233,11815,12464,15976,18248,19048,31077,
#Partially deleted in new
chr22	42583721	42614911	chr22:42583721-42614911	1	-	42584983	42614857	789624	5	1294,112,96,391,113,	0,12532,15976,19048,31077,
#Partially deleted in new
chr22	42584983	42614857	chr22:42584983-42614857	1	-	42585208	42614857	789624	3	333,391,59,	0,17786,29815,
#Partially deleted in new
chr22	42585886	42603012	chr22:42585886-42603012	0	-	42585886	42585886	8553170	9	82,67,130,78,180,65,96,87,243,	0,1619,6068,9650,10299,11786,13811,16083,16883,
#Partially deleted in new
chr22	42597707	42614860	chr22:42597707-42614860	0	-	42597713	42614857	789624	4	30,96,391,62,	0,1990,5062,17091,
#Partially deleted in new
chr22	42602767	42614877	chr22:42602767-42614877	0	-	42602767	42602767	8553170	3	393,91,79,	0,828,12031,
#Deleted in new
chr22	42615243	42615393	chr22:42615243-42615393	3	+	42615243	42615243	789624	1	150,	0,
#Deleted in new
chr22	42615243	42615907	chr22:42615243-42615907	3	+	42615243	42615243	8553170	1	664,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	42617839	42644509	chr22:42617839-42644509	1	-	42619772	42644509	0	9	2106,100,86,84,130,107,73,132,120,	0,5949,9464,9765,10312,13042,13538,18875,26550,
#Partially deleted in new
chr22	42618807	42649568	chr22:42618807-42649568	3	-	42619772	42649315	0	9	1138,100,86,84,130,107,73,132,274,	0,4981,8496,8797,9344,12074,12570,17907,30487,
#Partially deleted in new
chr22	42618841	42646977	chr22:42618841-42646977	1	-	42619772	42636798	0	9	1104,100,86,84,130,107,73,132,337,	0,4947,8462,8763,9310,12040,12536,17873,27799,
#Partially deleted in new
chr22	42618852	42636890	chr22:42618852-42636890	1	-	42619772	42636798	0	8	1093,100,86,84,130,107,73,176,	0,4936,8451,8752,9299,12029,12525,17862,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	42618874	42633348	chr22:42618874-42633348	0	-	42618874	42618874	8553170	6	1071,100,86,84,130,2467,	0,4914,8429,8730,9277,12007,
#Partially deleted in new
chr22	42619743	42646960	chr22:42619743-42646960	1	-	42619772	42636798	0	10	202,100,86,84,130,107,73,132,61,75,	0,4045,7560,7861,8408,11138,11634,16971,26897,27142,
#Partially deleted in new
chr22	42627640	42647070	chr22:42627640-42647070	0	-	42627640	42636798	789624	6	48,130,107,73,132,185,	0,511,3241,3737,9074,19245,
#Partially deleted in new
chr22	42631040	42646679	chr22:42631040-42646679	0	-	42631040	42631040	8553170	3	410,132,39,	0,5674,15600,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	42639802	42640601	chr22:42639802-42640601	3	-	42639971	42640274	789624	1	799,	0,
#Partially deleted in new
chr22	42692111	42720910	chr22:42692111-42720910	3	-	42692889	42693951	789624	3	1886,141,114,	0,3379,28685,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	42692120	42694986	chr22:42692120-42694986	1	-	42692889	42693951	789624	2	1877,444,	0,2422,
#Partially deleted in new
chr22	42692121	42695633	chr22:42692121-42695633	1	-	42692889	42693951	789624	2	1876,143,	0,3369,
#Partially deleted in new
chr22	42692121	42720819	chr22:42692121-42720819	1	-	42692889	42693951	789624	3	1876,57,23,	0,3453,28675,
#Partially deleted in new
chr22	42693970	42720829	chr22:42693970-42720829	0	-	42693970	42693970	8553170	3	27,486,33,	0,1175,26826,
#Partially deleted in new
chr22	42695170	42721298	chr22:42695170-42721298	0	-	42695170	42695170	8553170	2	461,134,	0,25994,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	42718245	42720862	chr22:42718245-42720862	0	-	42718245	42718245	8553170	2	341,66,	0,2551,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	42762859	42762959	chr22:42762859-42762959	3	-	42762859	42762859	8553170	1	100,	0,
#Deleted in new
chr22	42776405	42777296	chr22:42776405-42777296	7	-	42776405	42776405	16724991	1	891,	0,
#Deleted in new
chr22	42784461	42787100	chr22:42784461-42787100	7	+	42784461	42784461	16724991	7	105,93,147,135,147,72,78,	0,355,473,926,1371,1800,2561,
#Deleted in new
chr22	42791813	42794313	chr22:42791813-42794313	7	-	42791813	42791813	16724991	3	1390,127,79,	0,1722,2421,
#Partially deleted in new
chr22	42796501	42857402	chr22:42796501-42857402	3	-	42797587	42857182	0	16	1104,122,91,124,132,123,129,140,47,60,88,84,132,73,119,289,	0,2537,10571,12265,14311,20640,21227,25768,27154,30438,35047,37740,38860,44442,51012,60612,
#Partially deleted in new
chr22	42797413	42857239	chr22:42797413-42857239	1	-	42797587	42857182	0	15	192,122,91,124,132,123,129,140,47,60,88,84,73,119,126,	0,1625,9659,11353,13399,19728,20315,24856,26242,29526,34135,36828,43530,50100,59700,
#Partially deleted in new
chr22	42807073	42831652	chr22:42807073-42831652	0	-	42807073	42831652	789624	8	90,124,123,129,140,47,60,104,	0,1693,10068,10655,15196,16582,19866,24475,
#Partially deleted in new
chr22	42823655	42857268	chr22:42823655-42857268	0	-	42823655	42857182	789624	6	47,60,88,73,119,155,	0,3284,7893,17288,23858,33458,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	42835411	42876207	chr22:42835411-42876207	0	-	42858415	42876207	789624	4	82,73,136,71,	0,5532,22975,40725,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	42835412	42858106	chr22:42835412-42858106	0	-	42835412	42857881	789624	4	81,73,119,228,	0,5531,12101,22466,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	42847233	42857294	chr22:42847233-42857294	0	-	42847233	42847233	8553170	2	399,181,	0,9880,
#Deleted in new
chr22	42853402	42853799	chr22:42853402-42853799	7	-	42853402	42853402	16724991	1	397,	0,
#Partially deleted in new
chr22	42869767	42947041	chr22:42869767-42947041	1	-	42871356	42912080	0	10	1702,197,122,121,176,156,236,157,137,145,	0,6369,9280,12416,14618,18875,21179,23689,42253,77129,
#Partially deleted in new
chr22	42869770	43015145	chr22:42869770-43015145	3	-	42871356	42912080	0	11	1699,197,123,122,121,176,156,236,157,137,125,	0,6366,7117,9277,12413,14615,18872,21176,23686,42250,145250,
#Partially deleted in new
chr22	42869774	42959881	chr22:42869774-42959881	1	-	42871356	42912080	0	10	1695,197,122,121,176,156,236,157,137,83,	0,6362,9273,12409,14611,18868,21172,23682,42246,90024,
#Partially deleted in new
chr22	42870929	42947041	chr22:42870929-42947041	1	-	42871356	42912080	0	11	540,197,123,122,121,176,156,236,157,137,145,	0,5207,5958,8118,11254,13456,17713,20017,22527,41091,75967,
#Partially deleted in new
chr22	42871127	42959878	chr22:42871127-42959878	1	-	42871356	42912080	0	11	342,197,123,122,121,176,156,236,157,137,116,	0,5009,5760,7920,11056,13258,17515,19819,22329,40893,88635,
#Partially deleted in new
chr22	42876136	42912157	chr22:42876136-42912157	0	-	42876136	42912080	789624	10	197,123,122,6,121,176,156,236,157,137,	0,751,2911,4480,6047,8249,12506,14810,17320,35884,
#Partially deleted in new
chr22	42890934	43015135	chr22:42890934-43015135	0	-	42890934	42912080	789624	5	248,157,137,161,115,	0,2522,21086,102685,124086,
#Partially deleted in new
chr22	42890943	42945873	chr22:42890943-42945873	0	-	42890943	42912080	789624	4	239,157,137,89,	0,2513,21077,54841,
#Partially deleted in new
chr22	42890943	43002440	chr22:42890943-43002440	0	-	42890943	42912080	789624	4	239,157,137,131,	0,2513,21077,111366,
#Partially deleted in new
chr22	42893456	43015098	chr22:42893456-43015098	0	-	42893456	42893456	8553170	4	157,139,137,78,	0,15970,18564,121564,
#Partially deleted in new
chr22	42893573	42959899	chr22:42893573-42959899	0	-	42893573	42912080	789624	3	40,137,328,	0,18447,65998,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	43038584	43052366	chr22:43038584-43052366	3	+	43038584	43038584	789624	3	1680,91,312,	0,2626,13470,
#Partially deleted in new
chr22	43039643	43089428	chr22:43039643-43089428	3	-	43039775	43075586	789624	11	262,164,87,144,109,135,181,209,117,85,152,	0,6766,12157,19740,24169,24546,28766,29992,35830,40258,49633,
#Partially deleted in new
chr22	43039643	43089338	chr22:43039643-43089338	0	-	43070175	43075586	789624	12	262,164,87,144,109,135,181,241,72,117,85,62,	0,6766,12157,19740,24169,24546,28766,29960,30527,35830,40258,49633,
#Partially deleted in new
chr22	43039668	43089419	chr22:43039668-43089419	0	-	43070175	43075586	789624	12	237,164,87,144,109,135,181,209,72,117,85,143,	0,6741,12132,19715,24144,24521,28741,29967,30502,35805,40233,49608,
#Partially deleted in new
chr22	43039775	43075586	chr22:43039775-43075586	1	-	43039775	43075586	789624	8	130,164,144,109,135,181,209,113,	0,6634,19608,24037,24414,28634,29860,35698,
#Deleted in new
chr22	43092166	43092524	chr22:43092166-43092524	7	+	43092166	43092166	16724991	1	358,	0,
#Partially deleted in new
chr22	43110747	43129712	chr22:43110747-43129712	3	+	43124022	43129305	0	5	56,168,99,130,500,	0,13268,16949,17748,18465,
#Partially deleted in new
chr22	43132205	43143394	chr22:43132205-43143394	3	-	43133042	43143348	0	4	1281,218,88,469,	0,4875,8956,10720,
#Partially deleted in new
chr22	43132879	43143364	chr22:43132879-43143364	1	-	43133454	43143348	0	3	607,88,439,	0,8282,10046,
#Partially deleted in new
chr22	43140829	43142964	chr22:43140829-43142964	0	-	43141024	43142964	789624	2	420,39,	0,2096,
#Partially deleted in new
chr22	43141055	43143280	chr22:43141055-43143280	0	-	43141055	43141055	8553170	2	194,355,	0,1870,
#Partially deleted in new
chr22	43151513	43163242	chr22:43151513-43163242	3	+	43159238	43162991	789624	4	91,211,139,440,	0,7696,9538,11289,
#Partially deleted in new
chr22	43151546	43163241	chr22:43151546-43163241	1	+	43161181	43162991	789624	3	58,139,439,	0,9505,11256,
#Partially deleted in new
chr22	43151572	43159672	chr22:43151572-43159672	0	+	43151572	43151572	8553170	2	32,463,	0,7637,
#Partially deleted in new
chr22	43151898	43161190	chr22:43151898-43161190	0	+	43159238	43161190	789624	3	322,211,139,	0,7311,9153,
#Partially deleted in new
chr22	43151930	43163210	chr22:43151930-43163210	1	+	43159238	43162991	789624	4	197,211,139,408,	0,7279,9121,10872,
#Partially deleted in new
chr22	43151934	43163241	chr22:43151934-43163241	1	+	43159238	43162991	789624	4	286,211,139,439,	0,7275,9117,10868,
#Partially deleted in new
chr22	43166621	43187133	chr22:43166621-43187133	3	-	43168007	43187069	789624	14	1538,139,69,82,152,112,195,117,77,134,160,199,170,241,	0,2152,2878,5197,5781,7093,7587,7877,9698,12997,13219,14120,16358,20271,
#Deleted in new
chr22	43166622	43170274	chr22:43166622-43170274	0	-	43166622	43166622	8553170	3	1537,139,775,	0,2151,2877,
#Partially deleted in new
chr22	43167602	43171750	chr22:43167602-43171750	1	-	43168007	43168819	789624	4	557,139,69,123,	0,1171,1897,4025,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	43174292	43175678	chr22:43174292-43175678	0	-	43174292	43174292	8553170	3	111,117,408,	0,206,978,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr22	43197282	43343388	chr22:43197282-43343388	3	-	43203996	43343261	789624	22	6867,80,153,198,162,168,162,204,138,117,105,120,123,117,123,117,117,126,135,129,132,215,	0,10251,10789,12760,13639,15142,16807,20972,23167,23890,25355,25814,30091,31789,34470,41555,60936,65437,93763,122654,141821,145891,
#Partially deleted in new
chr22	43203991	43343283	chr22:43203991-43343283	1	-	43203996	43343261	789624	10	57,73,123,117,117,126,135,129,132,110,	0,25124,27761,34846,54227,58728,87054,115945,135112,139182,
#Partially deleted in new
chr22	43212673	43213661	chr22:43212673-43213661	3	+	43212673	43212673	789624	2	24,507,	0,481,
#Partially deleted in new
chr22	43231755	43262799	chr22:43231755-43262799	0	-	43231755	43262799	789624	5	120,117,90,117,80,	0,7082,23732,26463,30964,
#Partially deleted in new
chr22	43232140	43239010	chr22:43232140-43239010	3	+	43232140	43232140	8553170	3	378,197,413,	0,1287,6457,
#Partially deleted in new
chr22	43237575	43343323	chr22:43237575-43343323	1	-	43238727	43343261	789624	8	1379,90,117,126,135,129,132,150,	0,17912,20643,25144,53470,82361,101528,105598,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	43270131	43272539	chr22:43270131-43272539	0	-	43270131	43270131	8553170	2	458,31,	0,2377,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	43270136	43272514	chr22:43270136-43272514	0	-	43270136	43270136	8553170	2	453,91,	0,2287,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	43275954	43283830	chr22:43275954-43283830	3	+	43275954	43275954	789624	2	57,1894,	0,5982,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	43316836	43320065	chr22:43316836-43320065	0	-	43316836	43316836	8553170	3	274,127,129,	0,1386,3100,
#Partially deleted in new
chr22	43316957	43320065	chr22:43316957-43320065	0	-	43316957	43316957	8553170	2	153,129,	0,2979,
#Partially deleted in new
chr22	43400330	43409681	chr22:43400330-43409681	3	+	43400330	43400330	789624	4	124,127,104,596,	0,1774,4448,8755,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	43411195	43507848	chr22:43411195-43507848	3	+	43424985	43505616	789624	7	366,302,182,226,116,114,2351,	0,13712,23838,63540,87039,91448,94302,
#Partially deleted in new
chr22	43412012	43435167	chr22:43412012-43435167	0	+	43424985	43435167	789624	3	146,302,134,	0,12895,23021,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	43412013	43506919	chr22:43412013-43506919	1	+	43424985	43505616	789624	7	145,302,182,226,116,114,1422,	0,12894,23020,62722,86221,90630,93484,
#Partially deleted in new
chr22	43416454	43425209	chr22:43416454-43425209	0	+	43424985	43425209	789624	3	59,367,302,	0,193,8453,
#Deleted in new
chr22	43416615	43419200	chr22:43416615-43419200	0	+	43416615	43416615	8553170	2	399,1544,	0,1041,
#Partially deleted in new
chr22	43416754	43425225	chr22:43416754-43425225	0	+	43416754	43416754	8553170	2	260,318,	0,8153,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	43516106	43537117	chr22:43516106-43537117	3	+	43516106	43516106	789624	3	270,121,2265,	0,2370,18746,
#Partially deleted in new
chr22	43528743	43812277	chr22:43528743-43812277	3	-	43528852	43782318	0	32	232,150,185,169,231,228,192,196,156,195,119,97,233,134,115,169,174,161,60,168,109,111,149,125,113,137,67,89,212,146,137,110,	0,2071,5944,8633,11383,26125,47553,51720,61330,71325,79738,87082,97703,103361,106358,138360,140128,143229,143502,149252,155003,158727,182731,188104,202955,207113,227022,236561,244148,253436,280251,283424,
#Partially deleted in new
chr22	43528743	43812190	chr22:43528743-43812190	1	-	43528852	43755816	0	30	232,150,185,169,231,228,192,196,156,195,119,97,233,134,115,169,174,161,60,168,109,111,149,125,113,137,67,89,137,23,	0,2071,5944,8633,11383,26125,47553,51720,61330,71325,79738,87082,97703,103361,106358,138360,140128,143229,143502,149252,155003,158727,182731,188104,202955,207113,227022,236561,280251,283424,
#Partially deleted in new
chr22	43528743	43570143	chr22:43528743-43570143	0	-	43528743	43528743	8553170	7	232,150,185,169,231,228,57,	0,2071,5944,8633,11383,26125,41343,
#Partially deleted in new
chr22	43528777	43533505	chr22:43528777-43533505	0	-	43528777	43528777	8553170	3	198,150,135,	0,2037,4593,
#Partially deleted in new
chr22	43528779	43532061	chr22:43528779-43532061	0	-	43528779	43528779	8553170	3	196,150,46,	0,2035,3236,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	43551845	43672270	chr22:43551845-43672270	0	-	43551845	43551845	8553170	13	3251,192,196,156,195,119,233,134,115,169,174,161,25,	0,24451,28618,38228,48223,56636,74601,80259,83256,115258,117026,120127,120400,
#Partially deleted in new
chr22	43683663	43812337	chr22:43683663-43812337	0	-	43683663	43683663	8553170	12	192,111,149,125,113,137,67,89,212,146,137,170,	0,3807,27811,33184,48035,52193,72102,81641,89228,98516,125331,128504,
#Partially deleted in new
chr22	43716670	43812305	chr22:43716670-43812305	1	-	43716808	43782212	789624	8	302,113,137,67,89,146,137,138,	0,15028,19186,39095,48634,65509,92324,95497,
#Deleted in new
chr22	43759198	43759910	chr22:43759198-43759910	7	-	43759198	43759198	16724991	1	712,	0,
#Partially deleted in new
chr22	43765304	43812253	chr22:43765304-43812253	0	-	43765304	43765304	8553170	4	89,107,137,86,	0,31940,43690,46863,
#Partially deleted in new
chr22	43782209	43812274	chr22:43782209-43812274	0	-	43782209	43782209	8553170	4	116,107,137,107,	0,15035,26785,29958,
#Partially deleted in new
chr22	43802543	43802772	chr22:43802543-43802772	7	+	43802543	43802543	16724991	1	229,	0,
#Partially deleted in new
chr22	43812455	43817394	chr22:43812455-43817394	3	+	43812455	43812455	8553170	2	378,481,	0,4458,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	43812492	43813955	chr22:43812492-43813955	1	+	43812492	43812492	8553170	1	1463,	0,
#Partially deleted in new
chr22	43824508	43862503	chr22:43824508-43862503	3	-	43826000	43862382	0	7	1605,139,95,127,81,131,290,	0,4551,9131,14358,15436,17293,37705,
#Partially deleted in new
chr22	43824509	43862470	chr22:43824509-43862470	0	-	43827599	43862382	0	8	1604,127,139,95,127,81,131,257,	0,3004,4550,9130,14357,15435,17292,37704,
#Partially deleted in new
chr22	43824509	43862406	chr22:43824509-43862406	0	-	43839966	43862382	789624	6	1604,139,95,127,81,193,	0,4550,9130,14357,15435,37704,
#Deleted in new
chr22	43828805	43838913	chr22:43828805-43838913	0	-	43828805	43828805	8553170	3	393,95,47,	0,4834,10061,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	43879677	43892010	chr22:43879677-43892010	1	-	43880794	43891880	789624	9	1208,117,133,186,57,214,66,233,323,	0,1880,4535,6625,7913,9647,10121,11384,12010,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	43879678	43892013	chr22:43879678-43892013	3	-	43880794	43891880	789624	9	1207,117,133,186,61,210,66,233,326,	0,1879,4534,6624,7912,9650,10120,11383,12009,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	43879678	43892013	chr22:43879678-43892013	1	-	43880794	43891880	789624	7	1207,117,133,186,61,167,326,	0,1879,4534,6624,7912,9650,12009,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	43879875	43892013	chr22:43879875-43892013	1	-	43880794	43891880	789624	7	1010,117,133,186,57,171,326,	0,1682,4337,6427,7715,9449,11812,
#Partially deleted in new
chr22	43884212	43891995	chr22:43884212-43891995	0	-	43884212	43891880	789624	5	133,186,61,233,308,	0,2090,3378,6849,7475,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	43923738	43947568	chr22:43923738-43947568	3	+	43923911	43946382	789624	9	360,233,66,210,61,222,133,105,1415,	0,3196,5085,9139,10867,13312,16254,20952,22415,
#Partially deleted in new
chr22	43923791	43964488	chr22:43923791-43964488	0	+	43923911	43927115	789624	10	307,228,66,210,61,222,133,105,111,37,	0,3148,5032,9086,10814,13259,16201,20899,39494,40660,
#Partially deleted in new
chr22	43923802	43947061	chr22:43923802-43947061	1	+	43923911	43946382	789624	9	284,233,66,210,61,222,133,105,908,	0,3132,5021,9075,10803,13248,16190,20888,22351,
#Partially deleted in new
chr22	43924113	43933087	chr22:43924113-43933087	0	+	43924113	43924113	8553170	4	221,233,66,210,	0,2821,4710,8764,
#Partially deleted in new
chr22	43933006	43939393	chr22:43933006-43939393	0	+	43933006	43933006	8553170	4	81,61,222,58,	0,1599,4044,6329,
#Partially deleted in new
chr22	43955420	43996533	chr22:43955420-43996533	3	+	43955577	43996383	789624	15	178,111,102,88,107,131,88,129,72,87,71,68,147,142,196,	0,7865,9031,13310,16815,17450,17815,20634,21329,22451,25970,28512,33690,34844,40917,
#Partially deleted in new
chr22	43955441	43973322	chr22:43955441-43973322	0	+	43955441	43955441	8553170	7	157,157,102,88,107,131,87,	0,7628,9010,13289,16794,17429,17794,
#Partially deleted in new
chr22	43957026	43957348	chr22:43957026-43957348	7	+	43957026	43957026	16724991	1	322,	0,
#Partially deleted in new
chr22	43974594	43996529	chr22:43974594-43996529	0	+	43974594	43974594	8553170	8	1589,72,87,71,68,147,142,192,	0,2155,3277,6796,9338,14516,15670,21743,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	43986343	43996529	chr22:43986343-43996529	0	+	43986343	43986343	8553170	3	2914,142,192,	0,3921,9994,
#Partially deleted in new
chr22	43990327	44010531	chr22:43990327-44010531	0	+	43990327	43990327	8553170	3	79,50,40,	0,19149,20164,
#Deleted in new
chr22	43995390	43996376	chr22:43995390-43996376	0	+	43995390	43995390	8553170	2	100,183,	0,803,
#Partially deleted in new
chr22	43999210	44168923	chr22:43999210-44168923	1	+	43999340	44168678	0	14	201,140,90,71,103,141,116,59,20,62,69,102,73,322,	0,323,94717,100842,119827,132276,133683,137249,140913,148650,152272,158771,164647,169391,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	44024276	44172949	chr22:44024276-44172949	3	+	44024339	44168678	0	13	175,90,71,103,141,116,59,20,62,69,102,73,4348,	0,69651,75776,94761,107210,108617,112183,115847,123584,127206,133705,139581,144325,
#Partially deleted in new
chr22	44024301	44119934	chr22:44024301-44119934	0	+	44024301	44024301	8553170	5	150,90,71,103,146,	0,69626,75751,94736,95487,
#Partially deleted in new
chr22	44026303	44169221	chr22:44026303-44169221	1	+	44093971	44168678	789624	12	73,90,71,103,141,116,59,20,62,102,73,620,	0,67624,73749,92734,105183,106590,110156,113820,121557,131678,137554,142298,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	44031364	44132965	chr22:44031364-44132965	0	+	44039851	44132965	789624	7	143,122,90,71,103,141,72,	0,8471,62563,68688,87673,100122,101529,
#Partially deleted in new
chr22	44069060	44169184	chr22:44069060-44169184	1	+	44069161	44168678	0	13	102,90,71,103,141,116,59,20,62,69,102,73,583,	0,24867,30992,49977,62426,63833,67399,71063,78800,82422,88921,94797,99541,
#Partially deleted in new
chr22	44086683	44100089	chr22:44086683-44100089	0	+	44086683	44086683	8553170	4	328,185,86,37,	0,2671,7248,13369,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	44102778	44116232	chr22:44102778-44116232	3	+	44102778	44102778	8553170	1	13454,	0,
#Partially deleted in new
chr22	44136463	44139124	chr22:44136463-44139124	0	+	44136463	44136463	8553170	2	55,141,	0,2520,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	44139364	44153626	chr22:44139364-44153626	3	+	44139364	44139364	8553170	1	14262,	0,
#Partially deleted in new
chr22	44162733	44168243	chr22:44162733-44168243	0	+	44162733	44162733	8553170	3	118,73,245,	0,1124,5265,
#Partially deleted in new
chr22	44168178	44168927	chr22:44168178-44168927	0	+	44168178	44168178	8553170	2	95,326,	0,423,
#Partially deleted in new
chr22	44172955	44208468	chr22:44172955-44208468	3	+	44183329	44206426	789624	14	236,176,91,65,103,141,116,56,23,59,69,102,73,2152,	0,8786,10362,12852,14820,16158,17595,19093,20845,23199,23391,25665,32801,33361,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	44172983	44187172	chr22:44172983-44187172	0	+	44172983	44172983	8553170	4	208,91,65,596,	0,10334,12824,13593,
#Partially deleted in new
chr22	44180889	44208469	chr22:44180889-44208469	1	+	44183329	44206426	789624	14	296,176,91,65,103,141,116,56,23,59,69,102,73,2153,	0,852,2428,4918,6886,8224,9661,11159,12911,15265,15457,17731,24867,25427,
#Deleted in new
chr22	44181021	44183408	chr22:44181021-44183408	0	+	44183329	44183408	789624	3	164,54,91,	0,842,2296,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	44181335	44206622	chr22:44181335-44206622	0	+	44181335	44181335	8553170	13	35,176,91,65,1302,141,116,81,57,69,102,73,306,	0,406,1982,4472,5241,7778,9215,10713,14821,15011,17285,24421,24981,
#Deleted in new
chr22	44181397	44183419	chr22:44181397-44183419	0	+	44183329	44183419	789624	2	520,102,	0,1920,
#Partially deleted in new
chr22	44181399	44206635	chr22:44181399-44206635	0	+	44183329	44192108	789624	13	32,176,91,65,103,141,116,81,57,69,102,73,319,	0,342,1918,4408,6376,7714,9151,10649,14757,14947,17221,24357,24917,
#Partially deleted in new
chr22	44181738	44198717	chr22:44181738-44198717	1	+	44183329	44192108	789624	10	179,91,65,103,141,116,81,57,69,97,	0,1579,4069,6037,7375,8812,10310,14418,14608,16882,
#Partially deleted in new
chr22	44181749	44186114	chr22:44181749-44186114	0	+	44181749	44181749	8553170	3	168,91,307,	0,1568,4058,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	44181860	44184261	chr22:44181860-44184261	1	+	44183329	44183615	789624	3	57,91,672,	0,1457,1729,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	44183030	44187739	chr22:44183030-44187739	3	-	44183030	44183030	8553170	1	4709,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	44185525	44207155	chr22:44185525-44207155	0	+	44185525	44185525	8553170	8	3729,116,81,57,69,102,73,839,	0,5025,6523,10631,10821,13095,20231,20791,
#Partially deleted in new
chr22	44196097	44219533	chr22:44196097-44219533	0	+	44196097	44196097	8553170	4	116,102,283,50,	0,2523,22393,23386,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	44210441	44229512	chr22:44210441-44229512	3	-	44210441	44210441	8553170	1	19071,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	44243666	44312851	chr22:44243666-44312851	3	-	44249684	44300945	789624	5	6019,318,214,99,101,	0,41761,53005,57212,69084,
#Partially deleted in new
chr22	44413484	44414814	chr22:44413484-44414814	7	-	44413484	44413484	16724991	2	382,70,	0,1260,
#Deleted in new
chr22	44443326	44444788	chr22:44443326-44444788	3	+	44443326	44443326	789624	3	75,150,405,	0,315,1057,
#Deleted in new
chr22	44483494	44483717	chr22:44483494-44483717	7	-	44483494	44483494	16724991	1	223,	0,
#Deleted in new
chr22	44486294	44486914	chr22:44486294-44486914	3	-	44486294	44486294	8553170	1	620,	0,
#Deleted in new
chr22	44492571	44498298	chr22:44492571-44498298	3	-	44496836	44497556	789624	2	5240,255,	0,5472,
#Deleted in new
chr22	44566964	44568247	chr22:44566964-44568247	7	+	44566964	44566964	16724991	1	1283,	0,
#Partially deleted in new
chr22	44569338	44572210	chr22:44569338-44572210	0	+	44569338	44569338	789624	4	103,89,117,172,	0,1161,2037,2700,
#Partially deleted in new
chr22	44569351	44572341	chr22:44569351-44572341	0	+	44569351	44569351	789624	4	90,125,117,303,	0,1148,2024,2687,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	44569351	44572341	chr22:44569351-44572341	3	+	44569351	44569351	789624	5	90,67,89,117,303,	0,245,1148,2024,2687,
#Partially deleted in new
chr22	44570050	44571028	chr22:44570050-44571028	0	+	44570050	44570050	8553170	3	82,125,117,	0,449,861,
#Partially deleted in new
chr22	44606938	44625419	chr22:44606938-44625419	3	-	44606938	44606938	789624	4	110,170,117,103,	0,15348,15668,18378,
#Partially deleted in new
chr22	44651834	44652379	chr22:44651834-44652379	7	+	44651834	44651834	16724991	1	545,	0,
#Partially deleted in new
chr22	44668546	44737681	chr22:44668546-44737681	1	+	44702501	44737247	789624	9	259,117,81,49,58,92,141,136,910,	0,33945,46044,56697,58030,63183,63704,66480,68225,
#Partially deleted in new
chr22	44668546	44737681	chr22:44668546-44737681	1	+	44726597	44737247	789624	8	259,81,49,58,92,141,136,910,	0,46044,56697,58030,63183,63704,66480,68225,
#Partially deleted in new
chr22	44668712	44736909	chr22:44668712-44736909	0	+	44702501	44736909	789624	9	93,117,81,49,58,92,141,136,138,	0,33779,45878,56531,57864,63017,63538,66314,68059,
#Partially deleted in new
chr22	44676807	44737681	chr22:44676807-44737681	1	+	44726597	44737247	789624	8	433,81,49,58,92,141,136,910,	0,37783,48436,49769,54922,55443,58219,59964,
#Partially deleted in new
chr22	44676980	44736874	chr22:44676980-44736874	0	+	44676980	44676980	8553170	8	260,81,49,58,92,141,136,103,	0,37610,48263,49596,54749,55270,58046,59791,
#Partially deleted in new
chr22	44677056	44737680	chr22:44677056-44737680	1	+	44702501	44737247	789624	9	184,117,81,49,58,92,141,136,909,	0,25435,37534,48187,49520,54673,55194,57970,59715,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	44677084	44737681	chr22:44677084-44737681	1	+	44679799	44737247	789624	10	156,539,117,81,49,58,92,141,136,910,	0,2262,25407,37506,48159,49492,54645,55166,57942,59687,
#Partially deleted in new
chr22	44677084	44729408	chr22:44677084-44729408	0	+	44677084	44677084	8553170	6	156,117,81,53,58,95,	0,25407,37506,48159,49492,52229,
#Partially deleted in new
chr22	44677133	44730932	chr22:44677133-44730932	0	+	44677133	44677133	8553170	6	107,117,81,49,58,323,	0,25358,37457,48110,49443,53476,
#Partially deleted in new
chr22	44702197	44737681	chr22:44702197-44737681	3	+	44702474	44737247	789624	8	411,81,49,58,92,141,136,910,	0,12393,23046,24379,29532,30053,32829,34574,
#Partially deleted in new
chr22	44702217	44732317	chr22:44702217-44732317	0	+	44702474	44732317	789624	6	391,81,49,58,143,67,	0,12373,23026,24359,29461,30033,
#Partially deleted in new
chr22	44702217	44736786	chr22:44702217-44736786	0	+	44702501	44736786	789624	9	192,117,81,49,58,92,141,136,15,	0,274,12373,23026,24359,29512,30033,32809,34554,
#Partially deleted in new
chr22	44702218	44737441	chr22:44702218-44737441	0	+	44702474	44731781	789624	8	390,81,49,58,87,141,136,670,	0,12372,23025,24358,29516,30032,32808,34553,
#Partially deleted in new
chr22	44702232	44862671	chr22:44702232-44862671	3	+	44702474	44862595	789624	15	376,81,49,58,150,88,132,87,99,111,74,78,129,104,397,	0,12358,23011,24344,84224,99844,106074,112439,120138,123250,143036,145740,146699,157498,160042,
#Partially deleted in new
chr22	44702474	44862706	chr22:44702474-44862706	1	+	44702474	44862595	789624	17	134,81,49,58,92,141,136,150,88,87,99,111,74,78,129,104,432,	0,12116,22769,24102,29255,29776,32552,83982,99602,112197,119896,123008,142794,145498,146457,157256,159800,
#Partially deleted in new
chr22	44702485	44737662	chr22:44702485-44737662	0	+	44702501	44731781	789624	7	123,81,49,58,87,141,891,	0,12105,22758,24091,29249,29765,34286,
#Partially deleted in new
chr22	44702519	44737215	chr22:44702519-44737215	0	+	44702519	44702519	8553170	7	89,81,58,92,141,136,444,	0,12071,24057,29210,29731,32507,34252,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	44725245	44809801	chr22:44725245-44809801	0	+	44725245	44725245	8553170	6	47,58,150,88,132,796,	0,1331,61211,76831,83061,83760,
#Partially deleted in new
chr22	44725260	44862671	chr22:44725260-44862671	0	+	44725260	44862595	789624	13	32,58,150,88,132,87,99,111,74,78,129,155,397,	0,1316,61196,76816,83046,89411,97110,100222,120008,122712,123671,134419,137014,
#Partially deleted in new
chr22	44730803	44737632	chr22:44730803-44737632	0	+	44730803	44730803	8553170	5	201,92,141,136,861,	0,926,1447,4223,5968,
#Partially deleted in new
chr22	44730883	44737681	chr22:44730883-44737681	0	+	44730883	44730883	8553170	4	938,141,136,910,	0,1367,4143,5888,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	44734107	44737681	chr22:44734107-44737681	0	+	44734107	44734107	8553170	2	1055,910,	0,2664,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	44752573	44850963	chr22:44752573-44850963	0	+	44752573	44752573	8553170	10	54,150,88,132,87,99,111,74,78,2032,	0,33883,49503,55733,62098,69797,72909,92695,95399,96358,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	44752585	44825591	chr22:44752585-44825591	0	+	44786527	44822415	789624	8	42,150,88,132,61,87,99,109,	0,33871,49491,55721,56086,62086,69785,72897,
#Partially deleted in new
chr22	44752602	44862788	chr22:44752602-44862788	1	+	44786527	44862315	789624	11	25,150,88,132,87,99,111,74,78,129,514,	0,33854,49474,55704,62069,69768,72880,92666,95370,96329,109672,
#Partially deleted in new
chr22	44752605	44862784	chr22:44752605-44862784	3	+	44786527	44862595	789624	12	22,150,88,132,87,99,111,74,78,129,104,510,	0,33851,49471,55701,62066,69765,72877,92663,95367,96326,107125,109669,
#Partially deleted in new
chr22	44752704	44814718	chr22:44752704-44814718	0	+	44786527	44814718	789624	7	36,68,60,150,88,132,47,	0,24457,33337,33752,49372,55602,61967,
#Partially deleted in new
chr22	44765228	44786508	chr22:44765228-44786508	0	+	44765228	44765228	8553170	3	171,325,52,	0,636,21228,
#Partially deleted in new
chr22	44786456	44862784	chr22:44786456-44862784	0	+	44786527	44808314	789624	10	150,132,87,99,111,74,78,129,104,510,	0,21850,28215,35914,39026,58812,61516,62475,73274,75818,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	44786551	44808809	chr22:44786551-44808809	0	+	44786551	44786551	8553170	3	55,88,503,	0,15525,21755,
#Partially deleted in new
chr22	44801819	44825551	chr22:44801819-44825551	0	+	44801819	44801819	8553170	5	345,132,87,99,69,	0,6487,12852,20551,23663,
#Partially deleted in new
chr22	44859660	44862463	chr22:44859660-44862463	0	+	44859660	44859660	8553170	2	174,189,	0,2614,
#Partially deleted in new
chr22	44881161	45009700	chr22:44881161-45009700	1	-	44883085	45009549	789624	13	2143,104,76,159,23,55,77,52,267,351,93,66,205,	0,4264,4701,6801,8598,10144,12295,14870,32660,35118,39236,127383,128334,
#Partially deleted in new
chr22	44881161	45008993	chr22:44881161-45008993	1	-	44883085	45008811	789624	13	2143,104,76,159,23,55,77,52,141,351,93,66,200,	0,4264,4701,6801,8598,10144,12295,14870,32660,35118,39236,127383,127632,
#Partially deleted in new
chr22	44881161	45008993	chr22:44881161-45008993	1	-	44883085	44916357	789624	14	2143,104,76,159,23,55,77,52,141,351,93,46,66,200,	0,4264,4701,6801,8598,10144,12295,14870,32660,35118,39236,52311,127383,127632,
#Partially deleted in new
chr22	44881164	45009649	chr22:44881164-45009649	3	-	44883085	45009549	789624	13	2140,104,76,159,23,55,77,52,141,351,93,66,154,	0,4261,4698,6798,8595,10141,12292,14867,32657,35115,39233,127380,128331,
#Partially deleted in new
chr22	44889772	45009999	chr22:44889772-45009999	0	-	44889772	44916357	789624	7	10,55,77,52,141,171,51,	0,1533,3684,6259,24049,26507,120176,
#Deleted in new
chr22	44901546	44902471	chr22:44901546-44902471	7	+	44901546	44901546	16724991	1	925,	0,
#Deleted in new
chr22	44901591	44902430	chr22:44901591-44902430	5	+	44901591	44901591	16724991	1	839,	0,
#Partially deleted in new
chr22	44913915	45008986	chr22:44913915-45008986	0	-	44913915	45008811	789624	5	47,351,93,66,193,	0,2364,6482,94629,94878,
#Partially deleted in new
chr22	44916320	45009321	chr22:44916320-45009321	0	-	44916320	44916320	8553170	4	310,93,66,84,	0,4077,92224,92917,
#Partially deleted in new
chr22	44916454	44969083	chr22:44916454-44969083	0	-	44916454	44916454	8553170	4	176,93,150,89,	0,3943,50560,52540,
#Partially deleted in new
chr22	44916594	45009592	chr22:44916594-45009592	0	-	44916594	44916594	8553170	5	36,93,46,66,97,	0,3803,16878,91950,92901,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	44968987	44971470	chr22:44968987-44971470	0	-	44968987	44968987	8553170	2	218,531,	0,1952,
#Partially deleted in new
chr22	44989121	45009547	chr22:44989121-45009547	0	-	44989121	44989121	8553170	3	410,66,52,	0,19423,20374,
#Deleted in new
chr22	45000564	45003619	chr22:45000564-45003619	3	-	45000564	45000564	789624	3	722,156,755,	0,1302,2300,
#Deleted in new
chr22	45008152	45009612	chr22:45008152-45009612	0	-	45008152	45008152	8553170	2	458,117,	0,1343,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	45133019	45163781	chr22:45133019-45163781	3	-	45133019	45133019	789624	3	1778,93,205,	0,5804,30557,
#Partially deleted in new
chr22	45134289	45163659	chr22:45134289-45163659	0	-	45134289	45134289	8553170	2	508,88,	0,29282,
#Deleted in new
chr22	45155538	45156011	chr22:45155538-45156011	3	-	45155538	45155538	8553170	1	473,	0,
#Partially deleted in new
chr22	45163840	45188015	chr22:45163840-45188015	3	+	45168177	45184655	0	8	456,79,84,187,663,82,119,3563,	0,4327,7759,12053,14397,17445,19561,20612,
#Partially deleted in new
chr22	45163985	45184830	chr22:45163985-45184830	1	+	45171614	45184655	0	9	311,79,156,84,187,663,82,119,378,	0,4182,7002,7614,11908,14252,17300,19416,20467,
#Partially deleted in new
chr22	45163996	45171639	chr22:45163996-45171639	0	+	45171614	45171639	789624	4	300,79,165,40,	0,4171,6991,7603,
#Partially deleted in new
chr22	45163996	45172206	chr22:45163996-45172206	0	+	45163996	45163996	8553170	3	300,79,607,	0,4171,7603,
#Partially deleted in new
chr22	45163999	45178314	chr22:45163999-45178314	0	+	45168177	45178314	789624	4	297,79,84,77,	0,4168,7600,14238,
#Partially deleted in new
chr22	45163999	45176006	chr22:45163999-45176006	0	+	45168177	45171011	789624	5	297,79,190,84,113,	0,4168,6988,7600,11894,
#Partially deleted in new
chr22	45164281	45171746	chr22:45164281-45171746	0	+	45164281	45164281	8553170	4	15,79,190,147,	0,3886,6706,7318,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	45164607	45168207	chr22:45164607-45168207	0	+	45168177	45168207	789624	3	151,252,40,	0,1257,3560,
#Partially deleted in new
chr22	45164634	45184504	chr22:45164634-45184504	0	+	45164634	45164634	8553170	5	124,101,82,119,52,	0,15585,16651,18767,19818,
#Partially deleted in new
chr22	45164645	45184830	chr22:45164645-45184830	1	+	45171614	45184655	0	9	113,79,190,84,187,663,82,119,378,	0,3522,6342,6954,11248,13592,16640,18756,19807,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	45164665	45171143	chr22:45164665-45171143	0	+	45164665	45164665	8553170	4	63,252,79,156,	0,1199,3502,6322,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	45164679	45168190	chr22:45164679-45168190	0	+	45168177	45168190	8553170	3	276,252,23,	0,1185,3488,
#Partially deleted in new
chr22	45168165	45178900	chr22:45168165-45178900	0	+	45168177	45171011	789624	4	81,190,84,663,	0,2822,3434,10072,
#Partially deleted in new
chr22	45168170	45183515	chr22:45168170-45183515	0	+	45168177	45183515	789624	5	76,84,187,82,114,	0,3429,7723,13115,15231,
#Partially deleted in new
chr22	45171049	45178430	chr22:45171049-45178430	0	+	45171049	45171049	8553170	5	128,84,229,187,193,	0,550,759,4844,7188,
#Partially deleted in new
chr22	45175817	45178467	chr22:45175817-45178467	0	+	45175817	45175817	8553170	2	263,230,	0,2420,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	45177698	45185624	chr22:45177698-45185624	0	+	45177698	45177698	8553170	3	1202,82,2223,	0,3587,5703,
#Partially deleted in new
chr22	45178989	45179310	chr22:45178989-45179310	3	+	45178989	45178989	8553170	1	321,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	45190337	45240769	chr22:45190337-45240769	3	-	45197175	45240703	789624	10	6879,159,163,195,141,102,78,120,152,130,	0,7452,9535,12652,13507,14879,15292,15455,21618,50302,
#Partially deleted in new
chr22	45195827	45212488	chr22:45195827-45212488	1	-	45197175	45212343	789624	10	1389,159,163,195,141,102,78,120,152,224,	0,1962,4045,7162,8017,9389,9802,9965,16128,16437,
#Partially deleted in new
chr22	45195827	45226903	chr22:45195827-45226903	1	-	45197175	45212069	789624	10	1389,159,163,195,141,102,78,120,152,124,	0,1962,4045,7162,8017,9389,9802,9965,16128,30952,
#Partially deleted in new
chr22	45195827	45205849	chr22:45195827-45205849	0	-	45197175	45205849	789624	8	1389,159,163,195,141,102,12,57,	0,1962,4045,7162,8017,9389,9802,9965,
#Partially deleted in new
chr22	45196037	45212457	chr22:45196037-45212457	0	-	45196037	45196037	8553170	9	1179,159,163,195,141,102,78,120,502,	0,1752,3835,6952,7807,9179,9592,9755,15918,
#Partially deleted in new
chr22	45196701	45198033	chr22:45196701-45198033	0	-	45196701	45196701	8553170	2	515,244,	0,1088,
#Partially deleted in new
chr22	45196748	45200209	chr22:45196748-45200209	0	-	45196748	45196748	8553170	3	468,159,337,	0,1041,3124,
#Partially deleted in new
chr22	45196963	45202684	chr22:45196963-45202684	0	-	45196963	45196963	8553170	4	253,159,163,91,	0,826,2909,5630,
#Partially deleted in new
chr22	45197105	45202715	chr22:45197105-45202715	0	-	45197105	45197105	8553170	4	111,159,163,153,	0,684,2767,5457,
#Partially deleted in new
chr22	45200953	45201019	chr22:45200953-45201019	3	-	45200953	45200953	5263520	1	66,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	45203130	45212081	chr22:45203130-45212081	0	-	45207685	45212081	789624	7	54,141,102,78,120,200,126,	0,714,2086,2499,2662,4442,8825,
#Partially deleted in new
chr22	45205220	45236277	chr22:45205220-45236277	0	-	45205220	45212069	789624	5	98,78,120,152,108,	0,409,572,6735,30949,
#Partially deleted in new
chr22	45205222	45213499	chr22:45205222-45213499	0	-	45205222	45213330	789624	5	96,78,120,152,179,	0,407,570,6733,8098,
#Partially deleted in new
chr22	45205259	45235413	chr22:45205259-45235413	0	-	45205259	45205259	8553170	5	59,78,120,152,165,	0,370,533,6696,29989,
#Partially deleted in new
chr22	45205883	45240742	chr22:45205883-45240742	0	-	45226192	45240703	789624	4	29,152,232,103,	0,6072,20268,34756,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	45211333	45212445	chr22:45211333-45212445	1	-	45211405	45212198	789624	2	99,490,	0,622,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	45211334	45212417	chr22:45211334-45212417	1	-	45211405	45212343	789624	3	98,152,153,	0,621,930,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	45262272	45263585	chr22:45262272-45263585	3	-	45262272	45262272	8553170	1	1313,	0,
#Deleted in new
chr22	45275598	45276085	chr22:45275598-45276085	7	+	45275598	45275598	16724991	1	487,	0,
#Partially deleted in new
chr22	45284981	45295874	chr22:45284981-45295874	3	+	45285013	45295719	789624	6	84,156,280,83,133,315,	0,959,2190,4079,8199,10578,
#Partially deleted in new
chr22	45284990	45295822	chr22:45284990-45295822	1	+	45285013	45295719	789624	4	75,156,133,263,	0,950,8190,10569,
#Deleted in new
chr22	45308967	45310173	chr22:45308967-45310173	0	+	45308967	45308967	8553170	3	114,451,146,	0,232,1060,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	45308981	45341955	chr22:45308981-45341955	3	+	45322379	45340405	789624	10	669,156,56,253,222,129,286,33,84,1570,	0,1046,13389,14193,18860,21621,23443,26368,27346,31404,
#Deleted in new
chr22	45309040	45310100	chr22:45309040-45310100	0	+	45309040	45309040	8553170	3	41,147,73,	0,159,987,
#Partially deleted in new
chr22	45309846	45340761	chr22:45309846-45340761	1	+	45322379	45340405	789624	9	337,56,253,222,129,286,33,84,376,	0,12524,13328,17995,20756,22578,25503,26481,30539,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	45310123	45329412	chr22:45310123-45329412	1	+	45322379	45328478	789624	5	60,56,253,222,1021,	0,12247,13051,17718,18268,
#Partially deleted in new
chr22	45310136	45328241	chr22:45310136-45328241	0	+	45310136	45310136	8553170	4	47,56,253,400,	0,12234,13038,17705,
#Partially deleted in new
chr22	45318419	45327960	chr22:45318419-45327960	0	+	45322379	45327960	789624	4	93,56,253,119,	0,3951,4755,9422,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	45318479	45322426	chr22:45318479-45322426	0	+	45322182	45322426	789624	4	161,192,174,56,	0,3122,3562,3891,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	45318790	45322383	chr22:45318790-45322383	0	+	45322182	45322383	789624	4	170,192,174,13,	0,2811,3251,3580,
#Partially deleted in new
chr22	45329147	45330719	chr22:45329147-45330719	0	+	45329147	45329147	8553170	2	237,117,	0,1455,
#Partially deleted in new
chr22	45329634	45332691	chr22:45329634-45332691	0	+	45329634	45329634	8553170	3	299,129,267,	0,968,2790,
#Partially deleted in new
chr22	45329643	45332655	chr22:45329643-45332655	0	+	45329643	45329643	8553170	3	290,154,231,	0,959,2781,
#Partially deleted in new
chr22	45330456	45336410	chr22:45330456-45336410	0	+	45330456	45330456	8553170	4	275,286,33,83,	0,1968,4893,5871,
#Partially deleted in new
chr22	45335024	45340761	chr22:45335024-45340761	0	+	45335024	45335024	8553170	4	164,33,84,376,	0,325,1303,5361,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	45335215	45340846	chr22:45335215-45340846	0	+	45335215	45335215	8553170	3	167,84,461,	0,1112,5170,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	45336394	45340882	chr22:45336394-45340882	0	+	45336394	45336394	8553170	3	17,135,497,	0,1439,3991,
#Partially deleted in new
chr22	45344062	45413567	chr22:45344062-45413567	3	-	45344555	45413567	789624	25	595,111,70,152,155,157,99,154,146,142,107,117,138,147,180,186,208,83,141,259,239,204,113,189,109,	0,1396,5665,8388,9915,10896,14634,15742,17776,18822,25891,27408,28092,39404,42804,45649,49571,50622,52283,55032,58270,62397,62690,64647,69396,
#Partially deleted in new
chr22	45344457	45413619	chr22:45344457-45413619	1	-	45344555	45413567	789624	23	200,111,155,157,99,154,146,142,107,117,138,147,180,186,208,83,141,259,239,204,113,189,161,	0,1001,9520,10501,14239,15347,17381,18427,25496,27013,27697,39009,42409,45254,49176,50227,51888,54637,57875,62002,62295,64252,69001,
#Partially deleted in new
chr22	45413690	45432496	chr22:45413690-45432496	3	+	45413886	45432362	789624	7	325,82,345,119,228,167,213,	0,631,3911,8599,12257,17209,18593,
#Partially deleted in new
chr22	45414322	45422506	chr22:45414322-45422506	0	+	45414322	45414322	8553170	3	81,345,217,	0,3279,7967,
#Partially deleted in new
chr22	45418006	45431016	chr22:45418006-45431016	0	+	45418006	45418006	8553170	4	238,119,228,117,	0,4283,7941,12893,
#Partially deleted in new
chr22	45435863	45448743	chr22:45435863-45448743	3	-	45435863	45435863	8553170	2	172,373,	0,12507,
#Partially deleted in new
chr22	45502237	45531324	chr22:45502237-45531324	0	+	45502237	45531324	789624	5	103,106,136,163,60,	0,16444,23305,25609,29027,
#Partially deleted in new
chr22	45502276	45525678	chr22:45502276-45525678	0	+	45518728	45525678	789624	4	212,58,106,136,	0,15364,16405,23266,
#Partially deleted in new
chr22	45502831	45533095	chr22:45502831-45533095	0	+	45502985	45533095	789624	5	233,106,136,163,33,	0,15850,22711,25015,30231,
#Partially deleted in new
chr22	45502882	45563362	chr22:45502882-45563362	1	+	45502985	45563266	789624	15	182,106,136,163,60,102,138,138,144,129,126,120,132,124,451,	0,15799,22660,24964,28382,30180,30878,32317,38346,39272,40518,44202,45730,47609,60029,
#Partially deleted in new
chr22	45502882	45563352	chr22:45502882-45563352	1	+	45502985	45563266	789624	16	182,106,114,136,163,60,102,138,138,144,129,126,120,132,124,441,	0,15799,20208,22660,24964,28382,30180,30878,32317,38346,39272,40518,44202,45730,47609,60029,
#Partially deleted in new
chr22	45502890	45601135	chr22:45502890-45601135	3	+	45502985	45600446	789624	17	174,106,136,163,60,102,138,138,144,129,126,120,132,124,143,132,829,	0,15791,22652,24956,28374,30172,30870,32309,38338,39264,40510,44194,45722,47601,71620,74086,97416,
#Partially deleted in new
chr22	45502969	45565701	chr22:45502969-45565701	1	+	45502985	45564992	789624	15	95,106,136,163,60,102,138,138,144,129,126,120,132,124,818,	0,15712,22573,24877,28295,30093,30791,32230,38259,39185,40431,44115,45643,47522,61914,
#Partially deleted in new
chr22	45503045	45525563	chr22:45503045-45525563	0	+	45503045	45503324	789624	3	445,106,21,	0,15636,22497,
#Partially deleted in new
chr22	45517344	45518786	chr22:45517344-45518786	0	+	45517344	45517344	8553170	2	354,105,	0,1337,
#Partially deleted in new
chr22	45518581	45531324	chr22:45518581-45531324	0	+	45518728	45531324	789624	4	206,136,163,60,	0,6961,9265,12683,
#Partially deleted in new
chr22	45518782	45533898	chr22:45518782-45533898	0	+	45518782	45533898	789624	5	5,136,163,102,138,	0,6760,9064,14280,14978,
#Partially deleted in new
chr22	45525674	45542214	chr22:45525674-45542214	0	+	45525674	45541229	789624	8	4,163,60,102,138,82,144,60,	0,2172,5590,7388,8086,9581,15554,16480,
#Partially deleted in new
chr22	45532892	45541279	chr22:45532892-45541279	0	+	45532892	45532892	8553170	4	272,138,82,51,	0,868,2363,8336,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	45533150	45535584	chr22:45533150-45535584	0	+	45533150	45533150	8553170	3	14,138,329,	0,610,2105,
#Deleted in new
chr22	45533780	45535431	chr22:45533780-45535431	0	+	45533780	45533780	8553170	2	118,232,	0,1419,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	45541228	45551129	chr22:45541228-45551129	0	+	45541228	45541228	8553170	6	144,129,126,120,124,229,	0,926,2172,5856,9263,9672,
#Deleted in new
chr22	45577038	45578434	chr22:45577038-45578434	0	+	45577038	45578018	789624	2	70,529,	0,867,
#Partially deleted in new
chr22	45604431	45605621	chr22:45604431-45605621	3	-	45604431	45604431	789624	2	327,221,	0,969,
#Deleted in new
chr22	45624530	45624632	chr22:45624530-45624632	3	-	45624530	45624530	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	45657018	45680130	chr22:45657018-45680130	3	+	45657018	45657018	8553170	1	23112,	0,
#Partially deleted in new
chr22	45671797	45845304	chr22:45671797-45845304	1	+	45672063	45843671	789624	11	382,83,97,159,81,166,109,170,64,188,1636,	0,21198,28484,30891,46615,57627,66933,68571,135161,171193,171871,
#Partially deleted in new
chr22	45671798	45845307	chr22:45671798-45845307	3	+	45672063	45843671	789624	12	381,192,83,97,159,81,166,109,170,64,188,1639,	0,17913,21197,28483,30890,46614,57626,66932,68570,135160,171192,171870,
#Partially deleted in new
chr22	45672063	45740541	chr22:45672063-45740541	1	+	45672063	45740541	789624	10	116,192,83,97,159,81,166,29,89,173,	0,17648,20932,28218,30625,46349,57361,62325,66687,68305,
#Partially deleted in new
chr22	45672187	45718464	chr22:45672187-45718464	0	+	45672187	45672187	8553170	6	290,192,83,97,159,52,	0,17524,20808,28094,30501,46225,
#Partially deleted in new
chr22	45689465	45700322	chr22:45689465-45700322	0	+	45689465	45689465	8553170	4	75,192,83,41,	0,246,3530,10816,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	45703972	45738839	chr22:45703972-45738839	0	+	45703972	45703972	8553170	4	126,81,166,109,	0,14440,25452,34758,
#Partially deleted in new
chr22	45718422	45740800	chr22:45718422-45740800	0	+	45718422	45718422	8553170	4	71,166,109,432,	0,11002,20308,21946,
#Partially deleted in new
chr22	45729440	45823277	chr22:45729440-45823277	0	+	45729440	45823218	789624	5	150,109,170,64,160,	0,9290,10928,77518,93677,
#Partially deleted in new
chr22	45738473	45843671	chr22:45738473-45843671	0	+	45738473	45738473	8553170	6	83,109,170,64,188,3,	0,257,1895,68485,104517,105195,
#Partially deleted in new
chr22	45738738	45811794	chr22:45738738-45811794	0	+	45738738	45738738	8553170	4	101,170,146,97,	0,1630,68220,72959,
#Partially deleted in new
chr22	45740509	45744817	chr22:45740509-45744817	0	+	45740509	45740509	8553170	2	29,410,	0,3898,
#Deleted in new
chr22	45760523	45760598	chr22:45760523-45760598	3	+	45760523	45760523	5263520	1	75,	0,
#Deleted in new
chr22	45792417	45793636	chr22:45792417-45793636	7	-	45792417	45792417	16724991	1	1219,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	45793595	45843797	chr22:45793595-45843797	1	+	45793652	45843671	789624	4	183,64,188,129,	0,13363,49395,50073,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	45875931	45879247	chr22:45875931-45879247	3	+	45875931	45875931	8553170	1	3316,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	45875998	45887748	chr22:45875998-45887748	0	-	45875998	45875998	8553170	3	543,159,103,	0,3092,11647,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	45876127	45891438	chr22:45876127-45891438	3	-	45876127	45876127	8553170	4	414,147,114,34,	0,1086,2963,15277,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	45920361	45977129	chr22:45920361-45977129	3	-	45922855	45976754	789624	4	2974,272,227,446,	0,10736,29558,56322,
#Partially deleted in new
chr22	45922110	45972715	chr22:45922110-45972715	1	-	45922855	45972237	789624	4	1225,272,227,561,	0,8987,27809,50044,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	45922110	45976022	chr22:45922110-45976022	1	-	45922855	45975567	789624	4	1225,272,227,478,	0,8987,27809,53434,
#Partially deleted in new
chr22	45927481	45976805	chr22:45927481-45976805	1	-	45927526	45976754	789624	4	93,272,227,122,	0,3616,22438,49202,
#Partially deleted in new
chr22	45931295	45975909	chr22:45931295-45975909	0	-	45931295	45950016	789624	3	74,227,220,	0,18624,44394,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	46006615	46010777	chr22:46006615-46010777	3	+	46006615	46006615	5263520	1	4162,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	46013605	46015498	chr22:46013605-46015498	3	+	46013605	46013605	8553170	2	205,1002,	0,891,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	46039906	46044064	chr22:46039906-46044064	0	-	46039906	46039906	8553170	1	4158,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	46040265	46044610	chr22:46040265-46044610	0	-	46040265	46040265	8553170	3	787,1126,671,	0,2308,3674,
#Partially deleted in new
chr22	46041008	46044853	chr22:46041008-46044853	3	-	46041008	46041008	789624	4	44,67,137,245,	0,1565,2554,3600,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	46049477	46054144	chr22:46049477-46054144	0	-	46049477	46049477	8553170	2	2422,395,	0,4272,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	46050458	46054144	chr22:46050458-46054144	3	-	46051826	46054093	789624	2	1441,395,	0,3291,
#Deleted in new
chr22	46053092	46053560	chr22:46053092-46053560	3	+	46053092	46053092	8553170	1	468,	0,
#Partially deleted in new
chr22	46053704	46057210	chr22:46053704-46057210	0	+	46053704	46053704	8553170	3	216,99,149,	0,3142,3357,
#Partially deleted in new
chr22	46053868	46106023	chr22:46053868-46106023	0	+	46053868	46053868	8553170	5	52,85,65,58,615,	0,44057,44625,49323,51540,
#Partially deleted in new
chr22	46054459	46057210	chr22:46054459-46057210	3	+	46054459	46054459	8553170	4	494,135,99,149,	0,1139,2387,2602,
#Partially deleted in new
chr22	46054914	46057210	chr22:46054914-46057210	0	+	46054914	46054914	8553170	3	39,99,149,	0,1932,2147,
#Deleted in new
chr22	46055739	46058160	chr22:46055739-46058160	3	-	46055739	46055739	8553170	2	776,405,	0,2016,
#Deleted in new
chr22	46067355	46069891	chr22:46067355-46069891	3	-	46067355	46067355	8553170	3	516,119,232,	0,615,2304,
#Partially deleted in new
chr22	46080311	46098558	chr22:46080311-46098558	0	+	46080311	46080311	8553170	3	344,85,65,	0,17614,18182,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	46085996	46111475	chr22:46085996-46111475	1	+	46085996	46085996	789624	6	164,85,65,58,87,1805,	0,11929,12497,17195,23270,23674,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	46086002	46113928	chr22:46086002-46113928	3	+	46086002	46086002	789624	5	158,85,65,87,4165,	0,11923,12491,23264,23761,
#Deleted in new
chr22	46091043	46091126	chr22:46091043-46091126	3	+	46091043	46091043	5263520	1	83,	0,
#Deleted in new
chr22	46112748	46112822	chr22:46112748-46112822	3	+	46112748	46112748	5263520	1	74,	0,
#Deleted in new
chr22	46113565	46113657	chr22:46113565-46113657	3	+	46113565	46113565	5263520	1	92,	0,
#Deleted in new
chr22	46113685	46113768	chr22:46113685-46113768	3	+	46113685	46113685	5263520	1	83,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	46150520	46198410	chr22:46150520-46198410	0	+	46198383	46198410	789624	4	132,83,84,69,	0,1367,26232,47821,
#Partially deleted in new
chr22	46150551	46198591	chr22:46150551-46198591	0	+	46198383	46198591	789624	4	101,83,100,247,	0,1336,38171,47793,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	46150595	46243756	chr22:46150595-46243756	3	+	46198383	46235380	0	8	57,83,250,161,139,203,448,8624,	0,1292,47746,64577,67667,69216,81196,84537,
#Partially deleted in new
chr22	46150605	46215364	chr22:46150605-46215364	0	+	46198383	46215364	789624	4	47,83,250,192,	0,1282,47736,64567,
#Deleted in new
chr22	46150827	46151970	chr22:46150827-46151970	0	+	46150827	46150827	8553170	2	350,83,	0,1060,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	46151883	46243755	chr22:46151883-46243755	1	+	46198383	46235380	0	8	87,84,250,161,139,203,448,8623,	0,24869,46458,63289,66379,67928,79908,83249,
#Partially deleted in new
chr22	46151885	46156593	chr22:46151885-46156593	0	+	46151885	46151885	8553170	2	85,364,	0,4344,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	46154996	46156552	chr22:46154996-46156552	0	+	46154996	46154996	8553170	1	1556,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	46163302	46165347	chr22:46163302-46165347	3	+	46163302	46163302	8553170	1	2045,	0,
#Partially deleted in new
chr22	46171283	46198410	chr22:46171283-46198410	0	+	46171283	46171283	8553170	2	209,69,	0,27058,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	46171331	46198410	chr22:46171331-46198410	0	+	46171331	46171331	8553170	5	161,156,84,100,66,	0,4657,5421,17391,27013,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	46176747	46235403	chr22:46176747-46235403	1	+	46198383	46235380	0	7	89,247,161,139,203,448,271,	0,21597,38425,41515,43064,55044,58385,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	46176765	46220657	chr22:46176765-46220657	0	+	46176765	46176765	8553170	6	71,100,247,161,139,846,	0,11957,21579,38407,41497,43046,
#Deleted in new
chr22	46244010	46248285	chr22:46244010-46248285	1	-	46245091	46248284	789624	3	1228,97,114,	0,3114,4161,
#Partially deleted in new
chr22	46244012	46250679	chr22:46244012-46250679	3	-	46245091	46248284	789624	4	1226,112,113,424,	0,3097,4159,6243,
#Partially deleted in new
chr22	46244020	46250289	chr22:46244020-46250289	0	-	46246750	46248284	789624	5	1218,123,112,113,34,	0,2652,3089,4151,6235,
#Deleted in new
chr22	46244050	46248285	chr22:46244050-46248285	1	-	46246676	46248284	789624	4	1188,123,116,114,	0,2622,3055,4121,
#Partially deleted in new
chr22	46244622	46250294	chr22:46244622-46250294	0	-	46244622	46244622	8553170	2	616,39,	0,5633,
#Partially deleted in new
chr22	46244908	46250311	chr22:46244908-46250311	0	-	46244908	46244908	8553170	3	330,112,56,	0,2201,5347,
#Deleted in new
chr22	46255662	46263355	chr22:46255662-46263355	3	-	46256560	46263322	789624	1	7693,	0,
#Partially deleted in new
chr22	46267960	46275285	chr22:46267960-46275285	0	+	46268039	46269192	789624	6	112,78,148,82,172,38,	0,553,1181,4374,5937,7287,
#Partially deleted in new
chr22	46267963	46294008	chr22:46267963-46294008	3	+	46268039	46292884	789624	14	109,78,82,172,174,76,120,60,39,82,166,160,74,1218,	0,550,4371,5934,7284,10622,13635,16009,17277,19109,20459,21438,21862,24827,
#Partially deleted in new
chr22	46268007	46280242	chr22:46268007-46280242	0	+	46268039	46280242	789624	7	65,78,82,172,174,76,174,	0,506,4327,5890,7240,10578,12061,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	46268007	46268927	chr22:46268007-46268927	0	+	46268007	46268007	8553170	2	65,414,	0,506,
#Partially deleted in new
chr22	46268039	46269192	chr22:46268039-46269192	1	+	46268039	46269192	789624	3	33,78,51,	0,474,1102,
#Partially deleted in new
chr22	46272371	46284032	chr22:46272371-46284032	0	+	46272371	46282012	789624	7	45,172,174,76,120,181,60,	0,1526,2876,6214,9227,9599,11601,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	46288509	46292933	chr22:46288509-46292933	0	+	46288509	46292248	789624	5	79,160,74,126,143,	0,892,1316,3693,4281,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	46295142	46296660	chr22:46295142-46296660	3	-	46295142	46295142	789624	1	1518,	0,
#Deleted in new
chr22	46295694	46296000	chr22:46295694-46296000	0	-	46295694	46295694	8553170	1	306,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	46296740	46330810	chr22:46296740-46330810	3	+	46297400	46330130	789624	12	191,100,58,625,165,124,381,73,219,202,210,764,	0,639,11409,11578,15400,17149,19291,26449,29695,31947,32617,33306,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	46316036	46327316	chr22:46316036-46327316	0	+	46316036	46316036	8553170	3	376,73,881,	0,7153,10399,
#Partially deleted in new
chr22	46316036	46329130	chr22:46316036-46329130	0	+	46316036	46316036	8553170	4	376,73,219,443,	0,7153,10399,12651,
#Deleted in new
chr22	46328922	46330152	chr22:46328922-46330152	0	+	46328922	46328922	8553170	2	645,106,	0,1124,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	46330874	46333699	chr22:46330874-46333699	0	+	46330874	46330874	8553170	2	858,618,	0,2207,
#Partially deleted in new
chr22	46331446	46352330	chr22:46331446-46352330	0	+	46331446	46331446	8553170	6	286,166,123,118,54,67,	0,6332,14975,18899,20674,20817,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	46335400	46357335	chr22:46335400-46357335	0	+	46335764	46346473	789624	10	446,166,123,114,54,67,101,145,83,494,	0,2378,11021,14949,16720,16863,18366,20043,20589,21441,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr22	46335424	46357340	chr22:46335424-46357340	3	+	46335764	46357006	789624	11	422,166,107,123,173,54,67,101,145,83,499,	0,2354,7837,10997,14866,16696,16839,18342,20019,20565,21417,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	46335424	46357337	chr22:46335424-46357337	0	+	46335764	46346473	789624	10	422,166,123,173,54,67,101,145,83,496,	0,2354,10997,14866,16696,16839,18342,20019,20565,21417,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	46335424	46357337	chr22:46335424-46357337	0	+	46335764	46346473	789624	10	422,166,123,118,54,67,101,145,83,496,	0,2354,10997,14921,16696,16839,18342,20019,20565,21417,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	46335424	46357337	chr22:46335424-46357337	0	+	46335764	46346473	789624	9	422,166,123,114,54,67,101,145,496,	0,2354,10997,14925,16696,16839,18342,20019,21417,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr22	46335424	46357337	chr22:46335424-46357337	0	+	46335764	46350368	789624	11	422,166,107,123,118,54,67,101,145,83,496,	0,2354,7837,10997,14921,16696,16839,18342,20019,20565,21417,
#Deleted in new
chr22	46335688	46338211	chr22:46335688-46338211	0	+	46335688	46335688	8553170	2	158,433,	0,2090,
#Partially deleted in new
chr22	46335713	46354319	chr22:46335713-46354319	0	+	46335713	46335713	8553170	8	133,166,107,123,173,54,67,553,	0,2065,7548,10708,14577,16407,16550,18053,
#Partially deleted in new
chr22	46335713	46357340	chr22:46335713-46357340	1	+	46335764	46357006	789624	11	133,166,107,123,173,54,67,101,145,83,499,	0,2065,7548,10708,14577,16407,16550,18053,19730,20276,21128,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr22	46335715	46357311	chr22:46335715-46357311	0	+	46335764	46350368	789624	12	131,166,107,123,123,118,54,67,101,145,83,470,	0,2063,7546,10706,11657,14630,16405,16548,18051,19728,20274,21126,
#Partially deleted in new
chr22	46335724	46350392	chr22:46335724-46350392	0	+	46335764	46350392	789624	3	122,123,102,	0,10697,14566,
#Partially deleted in new
chr22	46335744	46357184	chr22:46335744-46357184	1	+	46335764	46356954	789624	10	102,166,107,123,173,54,67,101,145,343,	0,2034,7517,10677,14546,16376,16519,18022,19699,21097,
#Partially deleted in new
chr22	46335892	46356071	chr22:46335892-46356071	0	+	46337801	46356071	789624	10	214,166,107,123,173,54,67,101,145,82,	0,1886,7369,10529,14398,16228,16371,17874,19551,20097,
#Partially deleted in new
chr22	46335894	46350420	chr22:46335894-46350420	0	+	46335894	46335894	8553170	4	212,166,123,75,	0,1884,10527,14451,
#Partially deleted in new
chr22	46335921	46352911	chr22:46335921-46352911	0	+	46335921	46335921	8553170	7	185,166,107,123,118,54,648,	0,1857,7340,10500,14424,16199,16342,
#Partially deleted in new
chr22	46335950	46356979	chr22:46335950-46356979	0	+	46337801	46350368	789624	11	156,166,107,123,118,54,67,101,145,83,138,	0,1828,7311,10471,14395,16170,16313,17816,19493,20039,20891,
#Partially deleted in new
chr22	46335957	46352329	chr22:46335957-46352329	0	+	46335957	46335957	8553170	6	149,166,123,173,54,66,	0,1821,10464,14333,16163,16306,
#Partially deleted in new
chr22	46336144	46357016	chr22:46336144-46357016	1	+	46337801	46356954	789624	10	522,166,107,123,173,54,67,101,145,175,	0,1634,7117,10277,14146,15976,16119,17622,19299,20697,
#Deleted in new
chr22	46350344	46352841	chr22:46350344-46352841	0	+	46350344	46350344	8553170	4	119,54,67,317,	0,1776,1919,2180,
#Deleted in new
chr22	46351649	46352312	chr22:46351649-46352312	0	+	46351649	46351649	8553170	2	525,49,	0,614,
#Partially deleted in new
chr22	46352828	46357337	chr22:46352828-46357337	0	+	46352828	46352828	8553170	2	1039,1894,	0,2615,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	46353516	46357339	chr22:46353516-46357339	0	+	46353516	46353516	8553170	3	2072,83,498,	0,2473,3325,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	46354709	46357338	chr22:46354709-46357338	0	+	46354709	46354709	8553170	2	1363,497,	0,2132,
#Boundary problem: need 35, got 0, diff 35, mapped 0.0
chr22	46360833	46537170	chr22:46360833-46537170	3	-	46363177	46537170	789624	35	2354,256,225,150,104,95,126,127,80,113,175,201,127,168,205,144,184,210,95,102,184,121,142,175,114,186,167,126,164,158,89,116,223,639,3544,	0,3162,3678,4397,4752,5552,6159,6895,8345,8858,12049,16227,17757,19954,21012,23709,25568,28456,29558,30352,30799,33308,35771,36840,37690,38883,48162,48921,49564,50768,72559,75340,78355,102873,172793,
#Deleted in new
chr22	46361173	46365380	chr22:46361173-46365380	0	-	46361173	46361173	8553170	3	3078,225,150,	0,3338,4057,
#Partially deleted in new
chr22	46372912	46377624	chr22:46372912-46377624	0	-	46372912	46372912	8553170	3	145,201,277,	0,4148,4435,
#Partially deleted in new
chr22	46462779	46535294	chr22:46462779-46535294	0	-	46462907	46535294	789624	3	139,639,1668,	0,927,70847,
#Deleted in new
chr22	46481328	46481760	chr22:46481328-46481760	7	-	46481328	46481328	16724991	1	432,	0,
#Partially deleted in new
chr22	46530307	46534200	chr22:46530307-46534200	0	-	46530307	46530307	8553170	2	193,574,	0,3319,
#Partially deleted in new
chr22	46541494	46548196	chr22:46541494-46548196	3	+	46541494	46541494	8553170	2	1440,1509,	0,5193,
#Partially deleted in new
chr22	46576011	46637936	chr22:46576011-46637936	0	+	46626799	46637936	789624	3	67,211,97,	0,50739,61828,
#Partially deleted in new
chr22	46577128	46626899	chr22:46577128-46626899	0	+	46626799	46626899	789624	2	162,149,	0,49622,
#Partially deleted in new
chr22	46620401	46679785	chr22:46620401-46679785	3	+	46626799	46677251	789624	19	164,211,121,121,62,133,26,92,92,49,72,44,110,155,145,94,85,69,2639,	0,6349,17438,37785,40979,42638,43436,43624,45213,46423,47694,48287,48397,52441,53268,54255,55066,56198,56745,
#Partially deleted in new
chr22	46626760	46679790	chr22:46626760-46679790	1	+	46626799	46677251	789624	18	201,121,121,62,133,26,92,92,49,72,44,110,155,145,94,85,69,2644,	0,11079,31426,34620,36279,37077,37265,38854,40064,41335,41928,42038,46082,46909,47896,48707,49839,50386,
#Partially deleted in new
chr22	46626842	46637958	chr22:46626842-46637958	0	+	46626842	46626842	8553170	2	74,119,	0,10997,
#Partially deleted in new
chr22	46663106	46671167	chr22:46663106-46671167	0	+	46663106	46671167	789624	9	66,26,92,92,49,72,44,110,118,	0,731,919,2508,3718,4989,5582,5692,7943,
#Deleted in new
chr22	46674607	46679683	chr22:46674607-46679683	1	+	46674703	46677251	789624	4	143,85,69,2537,	0,860,1992,2539,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr22	46684410	46738261	chr22:46684410-46738261	3	-	46687133	46738148	789624	13	2796,209,206,77,106,153,75,146,64,126,123,114,255,	0,5581,7161,9016,10799,14902,17225,23432,26675,27757,35675,36491,53596,
#Partially deleted in new
chr22	46686982	46738207	chr22:46686982-46738207	0	-	46707935	46738148	789624	12	224,209,206,77,106,153,75,146,126,123,114,201,	0,3009,4589,6444,8227,12330,14653,20860,25185,33103,33919,51024,
#Partially deleted in new
chr22	46690054	46693812	chr22:46690054-46693812	0	-	46690054	46690054	8553170	4	146,206,77,138,	0,1517,3372,3620,
#Partially deleted in new
chr22	46735158	46738090	chr22:46735158-46738090	0	-	46735158	46735158	8553170	2	350,84,	0,2848,
#Deleted in new
chr22	46761893	46762563	chr22:46761893-46762563	3	-	46761893	46761893	8553170	1	670,	0,
#Partially deleted in new
chr22	46762616	47175699	chr22:46762616-47175699	1	+	46792775	47173626	789624	14	232,57,137,341,177,71,129,63,115,110,76,128,96,2202,	0,29903,30051,30884,34827,116036,128649,132167,149457,211673,235017,274454,348891,410881,
#Partially deleted in new
chr22	46762620	47175693	chr22:46762620-47175693	3	+	46762786	47173626	0	13	228,57,341,177,71,129,63,115,110,76,128,96,2196,	0,29899,30880,34823,116032,128645,132163,149453,211669,235013,274450,348887,410877,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	46762650	46793675	chr22:46762650-46793675	0	+	46762786	46789426	789624	4	198,160,57,175,	0,26661,29869,30850,
#Partially deleted in new
chr22	46762658	46793671	chr22:46762658-46793671	0	+	46762658	46762658	8553170	4	190,57,95,171,	0,29861,30009,30842,
#Partially deleted in new
chr22	46762671	47174083	chr22:46762671-47174083	1	+	46762786	47173626	789624	12	177,57,341,71,129,63,115,110,76,128,96,586,	0,29848,30829,115981,128594,132112,149402,211618,234962,274399,348836,410826,
#Partially deleted in new
chr22	46762680	47174086	chr22:46762680-47174086	1	+	46762786	47173626	0	11	168,341,71,129,63,115,110,76,128,96,589,	0,30820,115972,128585,132103,149393,211609,234953,274390,348827,410817,
#Partially deleted in new
chr22	46762682	47174087	chr22:46762682-47174087	0	+	46762786	46891342	789624	12	166,57,341,177,129,63,115,110,76,128,96,590,	0,29837,30818,34761,128583,132101,149391,211607,234951,274388,348825,410815,
#Partially deleted in new
chr22	46762686	46793616	chr22:46762686-46793616	0	+	46762686	46762686	8553170	5	162,58,57,137,116,	0,26293,29833,29981,30814,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	46763265	46793775	chr22:46763265-46793775	0	+	46763265	46763265	8553170	4	66,160,57,275,	0,26046,29254,30235,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr22	46763741	47174092	chr22:46763741-47174092	0	+	46793522	46913434	0	14	545,130,57,341,177,71,129,63,115,113,76,128,96,595,	0,4306,28778,29759,33702,114911,127524,131042,148332,149592,233892,273329,347766,409756,
#Partially deleted in new
chr22	46773926	47174092	chr22:46773926-47174092	1	+	46793522	47173626	0	13	309,57,341,177,71,129,63,115,110,76,128,96,595,	0,18593,19574,23517,104726,117339,120857,138147,200363,223707,263144,337581,399571,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	46914091	46916042	chr22:46914091-46916042	3	-	46914091	46914091	789624	1	1951,	0,
#Deleted in new
chr22	46915327	46915908	chr22:46915327-46915908	0	-	46915327	46915327	8553170	1	581,	0,
#Deleted in new
chr22	47115837	47117217	chr22:47115837-47117217	3	-	47115837	47115837	8553170	1	1380,	0,
#Deleted in new
chr22	47115837	47117215	chr22:47115837-47117215	0	-	47115837	47115837	8553170	1	1378,	0,
#Deleted in new
chr22	47259365	47261007	chr22:47259365-47261007	3	+	47259365	47259365	8553170	1	1642,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	47345568	47373541	chr22:47345568-47373541	3	+	47345568	47345568	789624	4	156,118,48,4042,	0,18023,21199,23931,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	47461298	47487111	chr22:47461298-47487111	3	-	47461298	47461298	789624	3	531,71,382,	0,2019,25431,
#Partially deleted in new
chr22	47463466	47487088	chr22:47463466-47487088	0	-	47463466	47463466	8553170	2	106,359,	0,23263,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	47621042	47631569	chr22:47621042-47631569	3	-	47621042	47621042	789624	6	59,497,1166,81,140,2242,	0,1413,3425,6119,6395,8285,
#Deleted in new
chr22	47625229	47629902	chr22:47625229-47629902	0	-	47625229	47625229	8553170	3	404,269,575,	0,2079,4098,
#Deleted in new
chr22	47625234	47629902	chr22:47625234-47629902	0	-	47625234	47625234	8553170	3	399,140,575,	0,2203,4093,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	47631689	47635624	chr22:47631689-47635624	0	+	47631689	47631689	8553170	2	197,445,	0,3490,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	47662558	47663603	chr22:47662558-47663603	7	-	47662558	47662558	16724991	2	362,378,	0,667,
#Partially deleted in new
chr22	47686240	47690847	chr22:47686240-47690847	0	+	47686240	47686240	8553170	5	72,121,136,70,186,	0,334,562,900,4421,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	47860670	47862062	chr22:47860670-47862062	3	+	47860670	47860670	8553170	2	148,71,	0,1321,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	47916727	47926264	chr22:47916727-47926264	3	+	47916727	47916727	8553170	1	9537,	0,
#Partially deleted in new
chr22	48044709	48048549	chr22:48044709-48048549	3	-	48044709	48044709	8553170	2	292,80,	0,3760,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	48052645	48058275	chr22:48052645-48058275	3	+	48052645	48052645	8553170	1	5630,	0,
#Deleted in new
chr22	48139460	48141001	chr22:48139460-48141001	3	-	48139460	48139460	8553170	2	236,262,	0,1279,
#Deleted in new
chr22	48141541	48143229	chr22:48141541-48143229	3	+	48141541	48141541	8553170	4	268,39,120,241,	0,464,1033,1447,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	48254902	48259116	chr22:48254902-48259116	3	-	48254902	48254902	8553170	3	1672,509,335,	0,2291,3879,
#Deleted in new
chr22	48274363	48274415	chr22:48274363-48274415	3	+	48274363	48274363	5263520	1	52,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	48403461	48415571	chr22:48403461-48415571	3	+	48403461	48403461	8553170	5	249,151,108,103,173,	0,1827,10193,11266,11937,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	48448889	48451217	chr22:48448889-48451217	3	+	48448889	48448889	8553170	2	450,118,	0,2210,
#Partially deleted in new
chr22	48489459	48750823	chr22:48489459-48750823	3	+	48489592	48749847	789624	4	245,150,128,985,	0,157137,218257,260379,
#Partially deleted in new
chr22	48489591	48850912	chr22:48489591-48850912	0	+	48489592	48850912	789624	4	113,150,128,155,	0,157005,218125,361166,
#Deleted in new
chr22	48538899	48547387	chr22:48538899-48547387	3	-	48538899	48538899	789624	5	549,254,91,320,194,	0,5772,7613,7793,8294,
#Deleted in new
chr22	48538901	48547342	chr22:48538901-48547342	1	-	48538901	48538901	8553170	2	547,120,	0,8321,
#Deleted in new
chr22	48543320	48547348	chr22:48543320-48547348	0	-	48543320	48543320	8553170	3	2386,500,126,	0,3192,3902,
#Partially deleted in new
chr22	48576305	48751932	chr22:48576305-48751932	1	+	48576480	48749847	789624	4	266,150,128,2094,	0,70291,131411,173533,
#Partially deleted in new
chr22	48576452	48750488	chr22:48576452-48750488	0	+	48576452	48576452	8553170	3	119,128,650,	0,131264,173386,
#Partially deleted in new
chr22	48693246	48750408	chr22:48693246-48750408	1	+	48693356	48749847	789624	3	135,128,570,	0,14470,56592,
#Deleted in new
chr22	48780294	48780353	chr22:48780294-48780353	3	+	48780294	48780294	5263520	1	59,	0,
#Partially deleted in new
chr22	48866769	48898386	chr22:48866769-48898386	3	+	48866769	48866769	789624	7	78,60,200,467,212,1409,1589,	0,18283,20243,25896,27634,27965,30028,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	49166420	49188062	chr22:49166420-49188062	3	-	49166420	49166420	8553170	3	323,604,61,	0,1704,21581,
#Deleted in new
chr22	49213910	49214247	chr22:49213910-49214247	7	-	49213910	49213910	16724991	1	337,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	49264200	49266080	chr22:49264200-49266080	3	+	49264200	49264200	8553170	1	1880,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	49372923	49377119	chr22:49372923-49377119	3	+	49372923	49372923	8553170	2	1540,800,	0,3396,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	49414523	49657504	chr22:49414523-49657504	3	-	49414523	49414523	789624	5	1512,134,114,337,100,	0,2078,2291,26352,242881,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	49500567	49501585	chr22:49500567-49501585	3	+	49500567	49500567	8553170	1	1018,	0,
#Deleted in new
chr22	49534061	49534926	chr22:49534061-49534926	3	+	49534061	49534061	8553170	1	865,	0,
#Partially deleted in new
chr22	49543392	49543466	chr22:49543392-49543466	3	-	49543392	49543392	5263520	1	74,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	49548680	49556473	chr22:49548680-49556473	3	+	49548680	49548680	8553170	2	72,3822,	0,3971,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	49572263	49575426	chr22:49572263-49575426	3	-	49572263	49572263	8553170	2	2297,82,	0,3081,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	49612656	49615716	chr22:49612656-49615716	3	-	49612656	49612656	8553170	2	2834,141,	0,2919,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	49619641	49624920	chr22:49619641-49624920	1	-	49619641	49619641	8553170	5	628,205,1416,504,63,	0,814,2553,4536,5216,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	49619643	49657542	chr22:49619643-49657542	0	-	49619643	49619643	8553170	4	1017,235,79,138,	0,4803,5214,37761,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	49620470	49657430	chr22:49620470-49657430	1	-	49620470	49620470	8553170	5	190,312,79,205,807,	0,3899,4387,6372,36153,
#Partially deleted in new
chr22	49624166	49626894	chr22:49624166-49626894	0	-	49624166	49624166	8553170	4	87,235,79,52,	0,280,691,2676,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	49718052	49724506	chr22:49718052-49724506	3	-	49718052	49718052	8553170	2	2779,996,	0,5458,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	49738676	49739003	chr22:49738676-49739003	3	+	49738676	49738676	8553170	1	327,	0,
#Partially deleted in new
chr22	49757626	49758980	chr22:49757626-49758980	7	-	49757626	49757626	16724991	3	86,46,684,	0,329,670,
#Partially deleted in new
chr22	49773282	49824804	chr22:49773282-49824804	1	-	49774232	49824317	0	12	1134,155,110,128,136,105,261,313,129,132,157,1854,	0,2308,2767,3751,4395,14107,20751,24522,25275,25705,30921,49668,
#Partially deleted in new
chr22	49773282	49825900	chr22:49773282-49825900	3	-	49774232	49824317	0	13	1134,155,110,128,136,105,261,313,129,132,157,1381,171,	0,2308,2767,3751,4395,14107,20751,24522,25275,25705,30921,49668,52447,
#Partially deleted in new
chr22	49773282	49827512	chr22:49773282-49827512	1	-	49774232	49824317	0	13	1134,155,110,128,136,498,261,313,129,132,157,1381,16,	0,2308,2767,3751,4395,14107,20751,24522,25275,25705,30921,49668,54214,
#Partially deleted in new
chr22	49773282	49823213	chr22:49773282-49823213	0	-	49777155	49823213	789624	12	1134,155,110,128,136,133,261,313,129,132,157,263,	0,2308,2767,3751,4395,14107,20751,24522,25275,25705,30921,49668,
#Partially deleted in new
chr22	49773292	49824804	chr22:49773292-49824804	1	-	49774232	49824317	0	12	1124,155,110,128,136,498,261,313,129,132,157,1854,	0,2298,2757,3741,4385,14097,20741,24512,25265,25695,30911,49658,
#Deleted in new
chr22	49775260	49776115	chr22:49775260-49776115	0	-	49775260	49775260	8553170	2	485,66,	0,789,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	49805451	49807208	chr22:49805451-49807208	3	+	49805451	49805451	8553170	1	1757,	0,
#Partially deleted in new
chr22	49817247	49817712	chr22:49817247-49817712	7	+	49817247	49817247	16724991	1	465,	0,
#Partially deleted in new
chr22	49818211	49823301	chr22:49818211-49823301	0	-	49818211	49818211	8553170	2	172,351,	0,4739,
#Partially deleted in new
chr22	49820832	49823205	chr22:49820832-49823205	0	-	49820832	49820832	8553170	2	154,255,	0,2118,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	49832615	49837786	chr22:49832615-49837786	3	-	49832615	49832615	8553170	2	1072,495,	0,4676,
#Deleted in new
chr22	49845928	49846090	chr22:49845928-49846090	7	+	49845928	49845928	16724991	1	162,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	49846455	49846720	chr22:49846455-49846720	3	+	49846455	49846455	8553170	1	265,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	49851424	49853364	chr22:49851424-49853364	3	+	49851424	49851424	8553170	1	1940,	0,
#Partially deleted in new
chr22	49853841	49890078	chr22:49853841-49890078	3	+	49883662	49887178	789624	2	148,6745,	0,29492,
#Partially deleted in new
chr22	49900228	49918458	chr22:49900228-49918458	3	-	49903837	49913765	789624	10	3838,76,170,224,104,195,174,133,240,196,	0,3950,4108,7492,9015,9665,10205,13156,13375,18034,
#Deleted in new
chr22	49902227	49904576	chr22:49902227-49904576	3	+	49902227	49902227	8553170	1	2349,	0,
#Partially deleted in new
chr22	49903649	49907918	chr22:49903649-49907918	0	-	49903707	49907918	789624	4	230,76,170,198,	0,529,687,4071,
#Partially deleted in new
chr22	49903960	49910088	chr22:49903960-49910088	0	-	49904235	49910088	789624	6	106,76,48,224,104,195,	0,218,376,3760,5283,5933,
#Partially deleted in new
chr22	49918166	49922707	chr22:49918166-49922707	0	+	49918769	49922707	789624	7	264,140,83,111,92,177,96,	0,592,1063,1563,1989,3418,4445,
#Partially deleted in new
chr22	49918634	49927540	chr22:49918634-49927540	1	+	49918769	49927307	789624	11	264,83,111,92,177,147,96,84,96,141,286,	0,595,1095,1521,2950,3662,3977,4599,5725,6782,8620,
#Partially deleted in new
chr22	49918695	49927528	chr22:49918695-49927528	3	+	49918769	49927307	789624	10	203,83,111,92,177,96,84,96,141,274,	0,534,1034,1460,2889,3916,4538,5664,6721,8559,
#Partially deleted in new
chr22	49918732	49927534	chr22:49918732-49927534	1	+	49918769	49927307	789624	9	166,83,111,92,177,96,96,141,280,	0,497,997,1423,2852,3879,5627,6684,8522,
#Partially deleted in new
chr22	49918732	49927534	chr22:49918732-49927534	1	+	49918769	49927307	789624	9	166,83,111,92,177,96,84,141,280,	0,497,997,1423,2852,3879,4501,6684,8522,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	49918732	49926505	chr22:49918732-49926505	0	+	49918732	49918732	8553170	9	166,83,111,92,177,96,84,96,1089,	0,497,997,1423,2852,3879,4501,5627,6684,
#Partially deleted in new
chr22	49918769	49923400	chr22:49918769-49923400	0	+	49918769	49918769	8553170	7	129,83,111,92,177,96,167,	0,460,960,1386,2815,3842,4464,
#Deleted in new
chr22	49921288	49922033	chr22:49921288-49922033	0	+	49921288	49921288	8553170	3	185,177,163,	0,296,582,
#Deleted in new
chr22	49921306	49923264	chr22:49921306-49923264	0	+	49921306	49921306	8553170	4	167,177,96,31,	0,278,1305,1927,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	49923209	49927528	chr22:49923209-49927528	0	+	49923209	49923209	8553170	2	2348,274,	0,4045,
#Deleted in new
chr22	49933197	49934074	chr22:49933197-49934074	3	-	49933197	49933197	8553170	1	877,	0,
#Deleted in new
chr22	49960512	49964080	chr22:49960512-49964080	3	+	49960947	49963127	789624	6	520,110,51,370,177,1141,	0,612,805,929,2176,2427,
#Deleted in new
chr22	49960767	49961646	chr22:49960767-49961646	0	+	49960767	49960767	8553170	3	467,51,205,	0,550,674,
#Deleted in new
chr22	49962865	49962939	chr22:49962865-49962939	3	+	49962865	49962865	5263520	1	74,	0,
#Partially deleted in new
chr22	49994512	50008692	chr22:49994512-50008692	1	-	49997037	50001190	789624	13	2348,81,97,58,45,173,55,72,140,115,110,150,56,	0,2481,2807,3172,3512,3624,4778,4918,5315,5965,6241,6569,14124,
#Partially deleted in new
chr22	49994512	50012659	chr22:49994512-50012659	3	-	49997037	50001190	789624	15	2348,81,97,58,45,173,55,72,140,115,110,150,28,81,115,	0,2481,2807,3172,3512,3624,4778,4918,5315,5965,6241,6569,14124,14470,18032,
#Partially deleted in new
chr22	50015122	50054626	chr22:50015122-50054626	3	-	50015122	50054626	789624	14	161,141,496,424,244,118,91,187,135,115,129,74,139,51,	0,1299,15307,16563,18079,19222,26064,26498,30132,30733,32045,34126,34986,39453,
#Partially deleted in new
chr22	50015126	50056935	chr22:50015126-50056935	0	-	50015126	50056935	789624	14	157,141,496,424,244,149,187,135,115,129,74,139,92,67,	0,1295,15303,16559,18075,19230,26494,30128,30729,32041,34122,34982,40107,41742,
#Partially deleted in new
chr22	50047167	50050218	chr22:50047167-50050218	0	-	50047167	50047167	8553170	3	124,74,110,	0,2081,2941,
#Partially deleted in new
chr22	50059390	50085902	chr22:50059390-50085902	3	-	50061582	50084902	789624	12	2267,165,123,57,117,72,102,102,54,90,236,548,	0,4643,9042,11136,14825,17450,18010,20527,20953,23693,25335,25964,
#Partially deleted in new
chr22	50059390	50085354	chr22:50059390-50085354	1	-	50061582	50084902	789624	12	2267,165,123,57,117,72,102,102,54,90,236,216,	0,4643,9042,11136,14825,17450,18010,20527,20953,23693,25335,25748,
#Partially deleted in new
chr22	50061460	50072815	chr22:50061460-50072815	0	-	50061460	50061460	8553170	5	197,165,123,57,71,	0,2573,6972,9066,11284,
#Partially deleted in new
chr22	50070538	50085384	chr22:50070538-50085384	0	-	50070538	50084902	789624	8	45,117,72,102,102,54,236,30,	0,3677,6302,6862,9379,9805,14187,14816,
#Partially deleted in new
chr22	50070541	50074684	chr22:50070541-50074684	0	-	50070541	50070541	8553170	3	42,117,77,	0,3674,4066,
#Partially deleted in new
chr22	50089878	50161618	chr22:50089878-50161618	3	+	50090088	50161449	789624	28	46,135,185,160,113,188,141,242,133,195,115,178,71,92,59,101,109,179,147,122,100,165,174,150,108,138,92,251,	0,172,2122,9564,18257,18778,23769,24502,25235,27278,30623,35513,36323,38537,44128,44651,52202,53164,54218,55810,59736,60856,63166,68178,69799,70809,71085,71489,
#Partially deleted in new
chr22	50090005	50161690	chr22:50090005-50161690	1	+	50090088	50161449	789624	27	180,185,160,113,188,141,242,133,195,115,178,71,92,59,101,109,179,147,122,100,165,174,150,108,138,92,323,	0,1995,9437,18130,18651,23642,24375,25108,27151,30496,35386,36196,38410,44001,44524,52075,53037,54091,55683,59609,60729,63039,68051,69672,70682,70958,71362,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	50090044	50108375	chr22:50090044-50108375	0	+	50090088	50090259	789624	4	1418,185,160,240,	0,1956,9398,18091,
#Partially deleted in new
chr22	50090053	50108375	chr22:50090053-50108375	0	+	50090088	50090259	789624	4	459,185,160,240,	0,1947,9389,18082,
#Partially deleted in new
chr22	50090064	50161690	chr22:50090064-50161690	1	+	50090088	50161449	789624	26	121,185,160,113,188,141,242,133,195,115,178,71,92,59,101,109,179,147,122,100,165,174,150,108,92,323,	0,1936,9378,18071,18592,23583,24316,25049,27092,30437,35327,36137,38351,43942,44465,52016,52978,54032,55624,59550,60670,62980,67992,69613,70899,71303,
#Partially deleted in new
chr22	50090255	50108184	chr22:50090255-50108184	0	+	50090255	50090255	8553170	4	142,185,160,49,	0,1745,9187,17880,
#Partially deleted in new
chr22	50090255	50161686	chr22:50090255-50161686	1	+	50090475	50161463	789624	26	257,185,160,113,188,141,242,133,195,115,178,71,92,59,101,109,179,147,122,100,165,174,150,108,138,319,	0,1745,9187,17880,18401,23392,24125,24858,26901,30246,35136,35946,38160,43751,44274,51825,52787,53841,55433,59359,60479,62789,67801,69422,70432,71112,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	50092744	50096437	chr22:50092744-50096437	3	+	50092744	50092744	8553170	1	3693,	0,
#Partially deleted in new
chr22	50114457	50142186	chr22:50114457-50142186	0	+	50114457	50125398	789624	7	165,133,195,178,59,101,106,	0,656,2699,10934,19549,20072,27623,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	50146964	50161677	chr22:50146964-50161677	1	+	50147141	50161449	789624	9	185,100,165,174,150,108,138,92,310,	0,2650,3770,6080,11092,12713,13723,13999,14403,
#Partially deleted in new
chr22	50149388	50159257	chr22:50149388-50159257	1	+	50149693	50158239	789624	3	326,174,1201,	0,3656,8668,
#Partially deleted in new
chr22	50170730	50180292	chr22:50170730-50180292	1	+	50170730	50179260	789624	4	226,1464,202,1072,	0,6208,8203,8490,
#Partially deleted in new
chr22	50170730	50180294	chr22:50170730-50180294	3	+	50170730	50179277	789624	3	226,1464,1361,	0,6208,8203,
#Partially deleted in new
chr22	50170760	50179598	chr22:50170760-50179598	0	+	50170760	50175469	789624	5	196,51,1464,202,378,	0,4671,6178,8173,8460,
#Partially deleted in new
chr22	50185914	50199564	chr22:50185914-50199564	1	+	50193060	50198519	789624	10	62,67,79,167,141,111,140,173,112,1220,	0,7112,7661,8425,8985,11326,11534,11908,12160,12430,
#Partially deleted in new
chr22	50185916	50199598	chr22:50185916-50199598	3	+	50193060	50198519	789624	10	85,67,79,167,141,111,140,173,112,1254,	0,7110,7659,8423,8983,11324,11532,11906,12158,12428,
#Partially deleted in new
chr22	50185917	50199595	chr22:50185917-50199595	0	+	50185917	50185917	8553170	9	84,67,79,167,141,111,140,364,1251,	0,7109,7658,8422,8982,11323,11531,11905,12427,
#Partially deleted in new
chr22	50190597	50199475	chr22:50190597-50199475	1	+	50193060	50198519	789624	10	51,67,79,167,141,111,140,173,112,1131,	0,2429,2978,3742,4302,6643,6851,7225,7477,7747,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	50191723	50192402	chr22:50191723-50192402	3	-	50191723	50191723	8553170	1	679,	0,
#Partially deleted in new
chr22	50193013	50199569	chr22:50193013-50199569	1	+	50193060	50199128	789624	10	80,79,167,141,111,140,173,112,171,454,	0,562,1326,1886,4227,4435,4809,5061,5331,6102,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	50196892	50198711	chr22:50196892-50198711	0	+	50196892	50196892	8553170	2	1294,367,	0,1452,
#Deleted in new
chr22	50199089	50200837	chr22:50199089-50200837	3	-	50199089	50199089	8553170	2	239,762,	0,986,
#Partially deleted in new
chr22	50200978	50217616	chr22:50200978-50217616	3	+	50201036	50217369	789624	9	612,204,181,131,281,151,186,157,412,	0,5338,7557,9202,9652,14738,15712,15993,16226,
#Partially deleted in new
chr22	50200978	50217615	chr22:50200978-50217615	1	+	50201036	50217369	789624	10	612,204,181,131,281,151,186,157,153,255,	0,5338,7557,9202,9652,14738,15712,15993,16226,16382,
#Deleted in new
chr22	50205584	50206062	chr22:50205584-50206062	3	-	50205584	50205584	8553170	1	478,	0,
#Partially deleted in new
chr22	50206441	50217616	chr22:50206441-50217616	0	+	50206441	50206441	8553170	8	79,229,131,281,151,186,157,412,	0,2046,3739,4189,9275,10249,10530,10763,
#Deleted in new
chr22	50208460	50209542	chr22:50208460-50209542	3	-	50208460	50208460	8553170	2	309,331,	0,751,
#Partially deleted in new
chr22	50217688	50244564	chr22:50217688-50244564	3	-	50217735	50244459	789624	25	139,200,214,133,195,142,169,148,59,1624,75,139,116,89,82,150,140,92,110,79,122,174,211,164,846,	0,229,500,799,1014,1379,1599,1955,2268,2562,4339,4765,6452,6643,6822,8105,8361,8598,9044,9310,10218,11715,15627,22515,26030,
#Partially deleted in new
chr22	50217688	50244971	chr22:50217688-50244971	1	-	50219348	50244459	789624	25	139,200,214,133,195,142,169,148,59,1683,75,139,116,89,82,150,140,92,110,79,122,174,211,164,1253,	0,229,500,799,1014,1379,1599,1955,2268,2503,4339,4765,6452,6643,6822,8105,8361,8598,9044,9310,10218,11715,15627,22515,26030,
#Partially deleted in new
chr22	50217688	50244992	chr22:50217688-50244992	0	-	50217688	50217688	8553170	23	139,485,133,195,142,504,59,600,75,139,116,89,82,150,140,92,110,79,122,174,211,164,1274,	0,229,799,1014,1379,1599,2268,3586,4339,4765,6452,6643,6822,8105,8361,8598,9044,9310,10218,11715,15627,22515,26030,
#Deleted in new
chr22	50217693	50220416	chr22:50217693-50220416	0	-	50217735	50220416	789624	10	134,181,182,133,195,142,169,148,59,166,	0,224,495,794,1009,1374,1594,1950,2263,2557,
#Partially deleted in new
chr22	50217693	50226189	chr22:50217693-50226189	0	-	50217693	50217693	8553170	16	134,200,214,133,195,142,169,148,1918,75,139,116,89,82,150,140,	0,224,495,794,1009,1374,1594,1950,2263,4334,4760,6447,6638,6817,8100,8356,
#Partially deleted in new
chr22	50221759	50224592	chr22:50221759-50224592	0	-	50221759	50221759	8553170	6	115,75,135,116,89,82,	0,268,694,2381,2572,2751,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr22	50222986	50226191	chr22:50222986-50226191	0	-	50222986	50222986	8553170	5	1270,89,82,150,142,	0,1345,1524,2807,3063,
#Partially deleted in new
chr22	50226734	50240360	chr22:50226734-50240360	0	-	50226734	50240360	789624	6	108,79,122,174,211,136,	0,264,1172,2669,6581,13490,
#Partially deleted in new
chr22	50245182	50251385	chr22:50245182-50251385	3	-	50245506	50251032	789624	20	348,153,183,79,57,92,85,256,68,107,90,60,66,127,69,105,98,97,135,412,	0,492,727,1115,1496,1692,2509,2707,3042,3183,3479,3648,3920,4145,4452,4677,4880,5244,5588,5791,
#Partially deleted in new
chr22	50245182	50251261	chr22:50245182-50251261	0	-	50250063	50251032	789624	18	348,153,183,79,57,92,85,256,68,90,60,66,127,85,105,98,135,288,	0,492,727,1115,1496,1692,2509,2707,3042,3479,3648,3920,4145,4452,4677,4880,5588,5791,
#Partially deleted in new
chr22	50245185	50251405	chr22:50245185-50251405	1	-	50250063	50251032	789624	19	345,153,183,79,57,92,85,256,68,107,90,60,66,127,69,105,98,135,432,	0,489,724,1112,1493,1689,2506,2704,3039,3180,3476,3645,3917,4142,4449,4674,4877,5585,5788,
#Partially deleted in new
chr22	50245404	50251079	chr22:50245404-50251079	0	-	50250063	50251032	789624	14	126,153,183,79,57,92,256,68,107,69,105,98,135,106,	0,270,505,893,1274,1470,2485,2820,2961,4230,4455,4658,5366,5569,
#Partially deleted in new
chr22	50245441	50251240	chr22:50245441-50251240	1	-	50245506	50251032	789624	18	89,153,183,79,57,92,85,256,68,107,66,127,69,105,98,97,135,267,	0,233,468,856,1237,1433,2250,2448,2783,2924,3661,3886,4193,4418,4621,4985,5329,5532,
#Partially deleted in new
chr22	50245441	50251032	chr22:50245441-50251032	0	-	50246962	50251032	789624	16	89,418,79,57,92,256,68,107,66,127,69,105,98,97,135,59,	0,233,856,1237,1433,2448,2783,2924,3661,3886,4193,4418,4621,4985,5329,5532,
#Partially deleted in new
chr22	50245441	50251242	chr22:50245441-50251242	0	-	50245441	50245441	8553170	19	89,153,183,79,57,92,85,256,68,107,90,29,66,189,69,105,98,135,141,	0,233,468,856,1237,1433,2250,2448,2783,2924,3220,3389,3661,3886,4193,4418,4621,5329,5660,
#Partially deleted in new
chr22	50245441	50251366	chr22:50245441-50251366	0	-	50245441	50245441	8553170	19	89,153,183,79,57,92,85,256,68,107,90,29,66,127,69,105,98,135,265,	0,233,468,856,1237,1433,2250,2448,2783,2924,3220,3389,3661,3886,4193,4418,4621,5329,5660,
#Partially deleted in new
chr22	50245449	50249208	chr22:50245449-50249208	0	-	50245449	50245449	8553170	10	81,418,79,57,92,85,256,248,90,378,	0,225,848,1229,1425,2242,2440,2775,3212,3381,
#Partially deleted in new
chr22	50245449	50261143	chr22:50245449-50261143	0	-	50245449	50245449	8553170	26	81,62,183,79,57,92,85,256,68,107,90,60,352,69,105,3418,174,79,80,72,115,48,30,112,59,315,	0,225,460,848,1229,1425,2242,2440,2775,2916,3212,3381,3653,4185,4410,4613,9747,10003,10165,10360,10635,11149,11485,11632,12793,15379,
#Partially deleted in new
chr22	50245506	50251032	chr22:50245506-50251032	1	-	50245506	50251032	789624	19	24,153,183,79,57,92,85,256,68,107,90,66,127,69,105,98,97,135,59,	0,168,403,791,1172,1368,2185,2383,2718,2859,3155,3596,3821,4128,4353,4556,4920,5264,5467,
#Partially deleted in new
chr22	50245790	50247948	chr22:50245790-50247948	0	-	50245790	50245790	8553170	5	302,438,92,85,59,	0,507,1084,1901,2099,
#Partially deleted in new
chr22	50245978	50248372	chr22:50245978-50248372	0	-	50245978	50245978	8553170	5	114,79,288,256,148,	0,319,700,1911,2246,
#Partially deleted in new
chr22	50246328	50249040	chr22:50246328-50249040	0	-	50246328	50246328	8553170	8	48,57,92,256,68,107,90,210,	0,350,546,1561,1896,2037,2333,2502,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	50247137	50248455	chr22:50247137-50248455	0	-	50247137	50247137	8553170	2	1008,231,	0,1087,
#Deleted in new
chr22	50247695	50249075	chr22:50247695-50249075	0	-	50247695	50247695	8553170	6	81,256,68,107,90,245,	0,194,529,670,966,1135,
#Deleted in new
chr22	50247907	50249203	chr22:50247907-50249203	0	-	50247907	50247907	8553170	3	385,107,542,	0,458,754,
#Deleted in new
chr22	50248694	50250890	chr22:50248694-50250890	0	-	50248694	50248694	8553170	8	57,60,96,127,69,105,98,120,	0,136,408,633,940,1165,1368,2076,
#Deleted in new
chr22	50249286	50250255	chr22:50249286-50250255	0	-	50249286	50249286	8553170	3	417,105,193,	0,573,776,
#Deleted in new
chr22	50249858	50251228	chr22:50249858-50251228	0	-	50249858	50249858	8553170	4	106,98,97,458,	0,204,568,912,
#Deleted in new
chr22	50249867	50251385	chr22:50249867-50251385	0	-	50249867	50249867	8553170	3	97,98,615,	0,195,903,
#Deleted in new
chr22	50250118	50251405	chr22:50250118-50251405	0	-	50250118	50250118	8553170	4	42,97,135,304,	0,308,652,983,
#Deleted in new
chr22	50250256	50250972	chr22:50250256-50250972	0	-	50250256	50250256	8553170	2	267,202,	0,514,
#Partially deleted in new
chr22	50252902	50261825	chr22:50252902-50261825	3	-	50253400	50261509	0	12	578,174,79,80,72,115,48,30,112,59,130,441,	0,2294,2550,2712,2907,3182,3696,4032,4179,5340,8264,8482,
#Partially deleted in new
chr22	50252902	50261308	chr22:50252902-50261308	1	-	50253400	50261181	789624	10	578,174,79,80,72,115,48,112,59,142,	0,2294,2550,2712,2907,3182,3696,4179,5340,8264,
#Partially deleted in new
chr22	50252902	50261545	chr22:50252902-50261545	0	-	50252902	50252902	8553170	12	578,174,79,80,72,115,48,177,112,59,130,161,	0,2294,2550,2712,2907,3182,3696,3885,4179,5340,8264,8482,
#Partially deleted in new
chr22	50252902	50261716	chr22:50252902-50261716	1	-	50253400	50261509	0	11	578,174,79,80,72,115,48,112,59,130,332,	0,2294,2550,2712,2907,3182,3696,4179,5340,8264,8482,
#Partially deleted in new
chr22	50252919	50261708	chr22:50252919-50261708	0	-	50252919	50252919	8553170	11	561,174,79,80,72,115,48,177,112,59,542,	0,2277,2533,2695,2890,3165,3679,3868,4162,5323,8247,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	50253780	50257107	chr22:50253780-50257107	0	-	50253780	50253780	8553170	4	1590,79,585,509,	0,1672,1834,2818,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	50253787	50261231	chr22:50253787-50261231	0	-	50253787	50253787	8553170	8	1583,79,80,72,115,48,59,65,	0,1665,1827,2022,2297,2811,4455,7379,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	50253852	50256153	chr22:50253852-50256153	0	-	50253852	50253852	8553170	4	1518,79,80,344,	0,1600,1762,1957,
#Partially deleted in new
chr22	50257562	50261169	chr22:50257562-50261169	0	-	50257562	50257562	8553170	3	98,59,341,	0,680,3266,
#Partially deleted in new
chr22	50257688	50261543	chr22:50257688-50261543	1	-	50257899	50261509	789624	4	257,59,130,159,	0,554,3478,3696,
#Deleted in new
chr22	50263712	50270393	chr22:50263712-50270393	3	-	50264947	50270292	0	12	1315,174,79,80,72,115,48,30,112,59,130,217,	0,1608,1869,2513,2827,3221,3414,3544,3658,3856,4107,6464,
#Deleted in new
chr22	50263714	50270393	chr22:50263714-50270393	0	-	50264947	50270292	0	13	163,233,174,79,80,72,115,48,30,112,59,130,217,	0,1080,1606,1867,2511,2825,3219,3412,3542,3656,3854,4105,6462,
#Deleted in new
chr22	50263738	50270393	chr22:50263738-50270393	0	-	50267133	50270292	789624	12	1289,174,79,80,72,115,48,34,112,59,130,217,	0,1582,1843,2487,2801,3195,3388,3514,3632,3830,4081,6438,
#Deleted in new
chr22	50267137	50270767	chr22:50267137-50270767	0	-	50267137	50267137	8553170	4	149,112,130,175,	0,233,682,3455,
#Partially deleted in new
chr22	50274978	50307572	chr22:50274978-50307572	1	-	50275703	50290584	0	37	830,75,76,65,148,161,155,85,101,157,147,67,182,230,101,140,177,228,130,171,137,109,149,158,82,93,102,109,115,154,127,101,129,183,1081,60,20,	0,910,1650,1863,2612,2874,3138,3456,3617,3876,4651,5026,5510,5765,6110,6381,6587,6875,7205,7732,8071,8358,8623,8854,9153,9594,10821,11011,11194,12132,12688,12958,13764,13981,14538,19740,32574,
#Partially deleted in new
chr22	50274978	50307627	chr22:50274978-50307627	3	-	50275703	50290584	0	37	830,75,76,65,148,161,155,85,101,157,147,67,182,230,101,140,177,228,130,171,137,109,149,158,82,93,102,109,115,154,127,101,129,183,1081,53,75,	0,910,1650,1863,2612,2874,3138,3456,3617,3876,4651,5026,5510,5765,6110,6381,6587,6875,7205,7732,8071,8358,8623,8854,9153,9594,10821,11011,11194,12132,12688,12958,13764,13981,14538,19747,32574,
#Partially deleted in new
chr22	50274978	50282562	chr22:50274978-50282562	0	-	50274978	50274978	8553170	19	830,75,76,65,148,161,155,85,101,157,147,67,182,230,101,140,177,228,379,	0,910,1650,1863,2612,2874,3138,3456,3617,3876,4651,5026,5510,5765,6110,6381,6587,6875,7205,
#Partially deleted in new
chr22	50274978	50278840	chr22:50274978-50278840	0	-	50274978	50274978	8553170	8	830,75,76,65,148,161,155,406,	0,910,1650,1863,2612,2874,3138,3456,
#Partially deleted in new
chr22	50274978	50283068	chr22:50274978-50283068	1	-	50277715	50278656	789624	22	830,75,76,65,148,112,47,155,85,101,157,147,67,182,230,101,140,177,228,130,171,19,	0,910,1650,1863,2612,2874,2988,3138,3456,3617,3876,4651,5026,5510,5765,6110,6381,6587,6875,7205,7732,8071,
#Partially deleted in new
chr22	50274984	50281934	chr22:50274984-50281934	0	-	50274984	50274984	8553170	17	824,75,76,65,148,161,155,85,101,157,147,67,182,230,101,383,81,	0,904,1644,1857,2606,2868,3132,3450,3611,3870,4645,5020,5504,5759,6104,6375,6869,
#Deleted in new
chr22	50277634	50280978	chr22:50277634-50280978	1	-	50277634	50280559	789624	16	39,64,107,53,148,6,3,80,70,30,27,129,147,67,182,235,	0,40,218,326,482,631,800,805,961,1032,1220,1248,1995,2370,2854,3109,
#Deleted in new
chr22	50277852	50289561	chr22:50277852-50289561	0	-	50277852	50289561	789624	6	161,155,85,101,157,45,	0,264,582,743,11133,11664,
#Deleted in new
chr22	50281126	50282006	chr22:50281126-50282006	0	-	50281126	50281126	8553170	3	63,140,441,	0,233,439,
#Deleted in new
chr22	50281573	50282880	chr22:50281573-50282880	0	-	50281573	50282880	789624	3	169,228,170,	0,280,1137,
#Deleted in new
chr22	50283337	50286253	chr22:50283337-50286253	0	-	50283337	50283337	8553170	8	108,149,158,113,93,102,109,81,	0,264,495,794,1235,2462,2652,2835,
#Deleted in new
chr22	50284166	50285843	chr22:50284166-50285843	0	-	50284166	50285843	789624	4	47,93,69,44,	0,406,678,1633,
#Partially deleted in new
chr22	50287986	50301462	chr22:50287986-50301462	0	-	50287986	50290584	789624	6	51,129,183,1081,60,116,	0,756,973,1530,6732,13360,
#Partially deleted in new
chr22	50290099	50307603	chr22:50290099-50307603	0	-	50290099	50290584	789624	3	498,60,51,	0,4619,17453,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr22	50309029	50327060	chr22:50309029-50327060	3	-	50312138	50326988	789624	20	3232,75,103,110,54,90,65,66,95,96,123,56,63,80,106,81,113,43,39,249,	0,3313,3493,3969,4416,4605,4784,5177,5370,5575,5769,6684,6995,7144,7340,8263,8878,9817,9935,17782,
#Partially deleted in new
chr22	50311965	50326977	chr22:50311965-50326977	0	-	50311965	50311965	8553170	17	296,75,103,110,54,90,459,95,96,123,56,451,81,113,43,39,166,	0,377,557,1033,1480,1669,1848,2434,2639,2833,3748,4059,5327,5942,6881,6999,14846,
#Partially deleted in new
chr22	50314202	50318967	chr22:50314202-50318967	0	-	50314202	50314202	8553170	13	70,95,96,123,56,63,80,106,61,81,113,43,3,	0,197,402,596,1511,1822,1971,2167,2363,3090,3705,4644,4762,
#Deleted in new
chr22	50314630	50316008	chr22:50314630-50316008	3	+	50314630	50314630	8553170	2	447,84,	0,1294,
#Partially deleted in new
chr22	50314821	50319095	chr22:50314821-50319095	0	-	50314821	50319069	789624	10	100,56,63,80,106,147,81,113,43,131,	0,892,1203,1352,1548,1744,2471,3086,4025,4143,
#Deleted in new
chr22	50316034	50317025	chr22:50316034-50317025	3	+	50316034	50316034	8553170	1	991,	0,
#Partially deleted in new
chr22	50316653	50318970	chr22:50316653-50318970	0	-	50316653	50316653	8553170	4	211,81,113,124,	0,639,1254,2193,
#Partially deleted in new
chr22	50343303	50445090	chr22:50343303-50445090	1	+	50393908	50444233	789624	23	247,131,243,187,138,66,113,114,127,153,210,65,116,86,98,58,125,164,160,89,205,252,888,	0,28716,50589,63385,71248,72788,75563,76045,78950,80158,87869,88961,91662,93063,94202,94539,94870,95295,96394,96657,97518,100562,100899,
#Partially deleted in new
chr22	50343316	50445090	chr22:50343316-50445090	1	+	50393908	50444247	789624	24	234,131,243,187,138,66,113,114,127,153,210,65,116,86,81,98,58,125,164,157,89,205,252,892,	0,28703,50576,63372,71235,72775,75550,76032,78937,80145,87856,88948,91649,93050,93671,94189,94526,94857,95282,96384,96644,97505,100549,100882,
#Partially deleted in new
chr22	50343322	50444374	chr22:50343322-50444374	1	+	50393908	50444247	789624	23	228,131,243,187,138,66,113,117,127,153,210,65,116,86,98,58,125,164,157,89,205,252,176,	0,28697,50570,63366,71229,72769,75544,76023,78931,80139,87850,88942,91643,93044,94183,94520,94851,95276,96378,96638,97499,100543,100876,
#Partially deleted in new
chr22	50343330	50444374	chr22:50343330-50444374	3	+	50393908	50444247	789624	23	220,131,243,187,138,66,113,114,127,153,210,65,116,86,98,58,125,164,157,89,205,252,176,	0,28689,50562,63358,71221,72761,75536,76018,78923,80131,87842,88934,91635,93036,94175,94512,94843,95268,96370,96630,97491,100535,100868,
#Partially deleted in new
chr22	50372071	50444391	chr22:50372071-50444391	1	+	50393908	50444247	789624	25	79,126,149,243,187,138,66,113,114,127,153,210,65,116,86,81,98,58,125,164,157,89,226,252,193,	0,16914,19795,21821,34617,42480,44020,46795,47277,50182,51390,59101,60193,62894,64295,64916,65434,65771,66102,66527,67629,67889,68729,71794,72127,
#Partially deleted in new
chr22	50419441	50444390	chr22:50419441-50444390	0	+	50419441	50444247	789624	17	21,127,153,210,65,116,86,81,98,58,125,164,157,89,205,252,192,	0,2812,4020,11731,12823,15524,16925,17546,18064,18401,18732,19157,20259,20519,21380,24424,24757,
#Partially deleted in new
chr22	50423604	50444371	chr22:50423604-50444371	0	+	50423604	50444247	789624	14	10,210,65,116,86,98,58,125,164,160,89,205,252,173,	0,7568,8660,11361,12762,13901,14238,14569,14994,16093,16356,17217,20261,20594,
#Deleted in new
chr22	50439752	50441074	chr22:50439752-50441074	0	+	50439752	50439752	8553170	2	297,253,	0,1069,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	50443086	50444378	chr22:50443086-50444378	0	+	50443086	50443086	8553170	2	1031,180,	0,1112,
#Partially deleted in new
chr22	50444999	50475024	chr22:50444999-50475024	3	-	50447141	50474840	789624	41	2241,132,88,212,108,231,131,127,186,102,180,182,78,138,197,208,137,179,128,196,74,173,269,159,69,150,113,205,99,129,114,78,114,109,133,106,111,159,138,86,239,	0,2322,2522,3233,3543,9512,9814,10016,10224,10481,11216,11492,12034,14255,14470,14952,15272,15534,16159,16523,16796,16947,17205,17559,17870,18283,19329,19534,19819,20001,20215,20763,20961,21150,21350,21605,22338,22532,22786,23376,29786,
#Partially deleted in new
chr22	50446805	50474942	chr22:50446805-50474942	1	-	50447141	50474840	789624	40	435,132,88,212,108,231,131,127,186,102,180,182,138,197,208,137,179,128,196,74,173,269,159,69,150,113,205,99,129,114,78,114,109,133,106,111,162,138,86,157,	0,516,716,1427,1737,7706,8008,8210,8418,8675,9410,9686,12449,12664,13146,13466,13728,14353,14717,14990,15141,15399,15753,16064,16477,17523,17728,18013,18195,18409,18957,19155,19344,19544,19799,20532,20726,20980,21570,27980,
#Partially deleted in new
chr22	50446809	50455377	chr22:50446809-50455377	0	-	50447141	50455377	789624	9	431,132,88,212,108,195,131,127,154,	0,512,712,1423,1733,7702,8004,8206,8414,
#Partially deleted in new
chr22	50446825	50455989	chr22:50446825-50455989	0	-	50446825	50446825	8553170	10	415,132,88,212,108,231,131,127,186,509,	0,496,696,1407,1717,7686,7988,8190,8398,8655,
#Deleted in new
chr22	50447082	50447609	chr22:50447082-50447609	0	-	50447082	50447082	8553170	2	158,288,	0,239,
#Deleted in new
chr22	50456588	50457347	chr22:50456588-50457347	0	-	50456588	50456588	8553170	2	85,314,	0,445,
#Deleted in new
chr22	50466195	50467355	chr22:50466195-50467355	0	-	50466195	50466195	8553170	3	63,133,751,	0,154,409,
#Partially deleted in new
chr22	50466430	50474849	chr22:50466430-50474849	0	-	50466430	50466430	8553170	6	52,106,111,392,86,64,	0,174,907,1101,1945,8355,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	50481555	50486440	chr22:50481555-50486440	3	+	50481847	50482903	789624	2	402,3874,	0,1011,
#Deleted in new
chr22	50481723	50482940	chr22:50481723-50482940	1	+	50481847	50482903	789624	3	40,121,374,	0,113,843,
#Deleted in new
chr22	50486783	50490036	chr22:50486783-50490036	1	+	50486897	50489825	0	8	129,81,81,163,100,110,68,289,	0,601,878,1102,1459,2256,2444,2964,
#Deleted in new
chr22	50486823	50490054	chr22:50486823-50490054	1	+	50486897	50489856	0	10	89,81,81,163,68,110,68,50,113,307,	0,561,838,1062,1451,2216,2404,2573,2708,2924,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	50486875	50490648	chr22:50486875-50490648	3	+	50486897	50489825	789624	10	37,81,81,163,68,110,68,50,99,901,	0,509,786,1010,1399,2164,2352,2521,2656,2872,
#Deleted in new
chr22	50487384	50489976	chr22:50487384-50489976	0	+	50487384	50489856	789624	9	81,81,163,68,65,68,50,113,229,	0,277,501,890,1700,1843,2012,2147,2363,
#Deleted in new
chr22	50502948	50507691	chr22:50502948-50507691	3	-	50503390	50507675	789624	14	751,97,112,169,183,97,106,135,142,179,218,29,254,110,	0,859,1391,1610,1853,2108,2280,2454,2725,3086,3336,3689,3833,4633,
#Deleted in new
chr22	50502950	50507684	chr22:50502950-50507684	1	-	50503390	50507054	789624	14	749,97,112,169,183,97,106,135,142,179,218,29,339,103,	0,857,1389,1608,1851,2106,2278,2452,2723,3084,3334,3687,3831,4631,
#Deleted in new
chr22	50503260	50505257	chr22:50503260-50505257	0	-	50503260	50503260	8553170	6	439,97,388,183,97,29,	0,547,1079,1541,1796,1968,
#Deleted in new
chr22	50504833	50506220	chr22:50504833-50506220	0	-	50504833	50504833	8553170	4	151,481,142,186,	0,223,840,1201,
#Deleted in new
chr22	50505695	50507166	chr22:50505695-50507166	0	-	50505695	50505695	8553170	6	120,179,218,29,254,24,	0,339,589,942,1086,1447,
#Deleted in new
chr22	50506395	50507250	chr22:50506395-50507250	0	-	50506395	50506395	8553170	3	107,29,469,	0,242,386,
#Partially deleted in new
chr22	50508215	50523472	chr22:50508215-50523472	3	+	50508337	50523375	789624	20	230,102,56,85,69,80,146,84,131,72,67,108,54,71,73,69,50,102,150,238,	0,8231,9211,9361,9525,9757,9917,10433,10974,12749,13327,13525,13770,13965,14127,14285,14455,14605,14801,15019,
#Partially deleted in new
chr22	50508242	50519752	chr22:50508242-50519752	1	+	50508337	50519359	789624	9	203,102,56,85,69,80,146,84,563,	0,8204,9184,9334,9498,9730,9890,10406,10947,
#Partially deleted in new
chr22	50508243	50523472	chr22:50508243-50523472	1	+	50508337	50523259	789624	19	202,102,56,85,69,80,146,84,131,72,67,108,54,71,73,69,50,102,456,	0,8203,9183,9333,9497,9729,9889,10405,10946,12721,13299,13497,13742,13937,14099,14257,14427,14577,14773,
#Partially deleted in new
chr22	50508244	50518276	chr22:50508244-50518276	0	+	50508337	50516472	789624	7	184,102,56,85,69,80,144,	0,8202,9182,9332,9496,9728,9888,
#Partially deleted in new
chr22	50508245	50521589	chr22:50508245-50521589	0	+	50508337	50521589	789624	10	200,56,85,69,80,146,84,131,72,47,	0,9181,9331,9495,9727,9887,10403,10944,12719,13297,
#Partially deleted in new
chr22	50508258	50518058	chr22:50508258-50518058	0	+	50508337	50516472	789624	7	187,55,102,56,85,69,86,	0,7461,8188,9168,9318,9482,9714,
#Partially deleted in new
chr22	50508259	50523472	chr22:50508259-50523472	1	+	50508337	50523375	789624	20	186,102,56,85,69,80,146,84,131,72,67,108,54,71,73,72,50,102,150,238,	0,8187,9167,9317,9481,9713,9873,10389,10930,12705,13283,13481,13726,13921,14083,14238,14411,14561,14757,14975,
#Partially deleted in new
chr22	50519546	50522418	chr22:50519546-50522418	0	+	50519546	50519546	8553170	7	91,72,67,108,54,71,76,	0,1418,1996,2194,2439,2634,2796,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	50520409	50522569	chr22:50520409-50522569	0	+	50520409	50520409	8553170	7	627,67,108,54,71,73,69,	0,1133,1331,1576,1771,1933,2091,
#Deleted in new
chr22	50522524	50523471	chr22:50522524-50523471	0	+	50522524	50523375	789624	5	45,50,102,87,237,	0,146,296,555,710,
#Deleted in new
chr22	50523567	50525606	chr22:50523567-50525606	3	-	50523610	50524411	0	2	857,135,	0,1904,
#Deleted in new
chr22	50523567	50526145	chr22:50523567-50526145	1	-	50523610	50524411	789624	2	857,145,	0,2433,
#Deleted in new
chr22	50523567	50526439	chr22:50523567-50526439	3	-	50523610	50524411	789624	2	857,194,	0,2678,
#Deleted in new
chr22	50523595	50525604	chr22:50523595-50525604	1	-	50523610	50524411	0	2	829,163,	0,1846,
#Deleted in new
chr22	50523905	50526145	chr22:50523905-50526145	0	-	50524398	50526145	789624	2	519,145,	0,2095,
#Deleted in new
chr22	50523925	50524780	chr22:50523925-50524780	3	+	50523925	50523925	8553170	1	855,	0,
#Deleted in new
chr22	50524001	50526439	chr22:50524001-50526439	0	-	50524398	50526439	789624	2	423,194,	0,2244,
#Partially deleted in new
chr22	50525751	50530056	chr22:50525751-50530056	3	-	50525769	50529709	0	10	167,141,231,163,119,130,99,203,224,153,	0,249,494,824,1413,1836,2760,3384,3744,4152,
#Partially deleted in new
chr22	50525751	50529999	chr22:50525751-50529999	1	-	50525769	50529709	0	10	167,141,231,163,119,130,99,203,259,96,	0,249,494,824,1413,1836,2760,3384,3744,4152,
#Partially deleted in new
chr22	50525751	50530015	chr22:50525751-50530015	1	-	50525769	50529709	0	10	167,156,231,163,119,130,99,203,224,112,	0,249,494,824,1413,1836,2760,3384,3744,4152,
#Partially deleted in new
chr22	50525754	50529996	chr22:50525754-50529996	0	-	50525754	50525754	8553170	9	164,141,231,163,119,130,99,203,501,	0,246,491,821,1410,1833,2757,3381,3741,
#Partially deleted in new
chr22	50525755	50530032	chr22:50525755-50530032	1	-	50525769	50529709	0	10	163,141,231,163,119,130,99,203,236,129,	0,245,490,820,1409,1832,2756,3380,3740,4148,
#Partially deleted in new
chr22	50525756	50530018	chr22:50525756-50530018	0	-	50525756	50525756	8553170	8	162,476,163,130,99,203,224,115,	0,244,819,1831,2755,3379,3739,4147,
#Partially deleted in new
chr22	50525784	50529990	chr22:50525784-50529990	0	-	50525784	50529709	789624	9	134,141,231,163,119,130,203,224,87,	0,216,461,791,1380,1803,3351,3711,4119,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	50527791	50530012	chr22:50527791-50530012	0	-	50527791	50527791	8553170	2	1940,109,	0,2112,
#Deleted in new
chr22	50529709	50531822	chr22:50529709-50531822	0	-	50529709	50529709	8553170	4	851,117,122,632,	0,1002,1227,1481,
#Deleted in new
chr22	50530408	50532579	chr22:50530408-50532579	3	-	50530479	50532077	789624	7	152,141,122,105,204,143,103,	0,303,528,782,1161,1560,2068,
#Deleted in new
chr22	50530408	50532184	chr22:50530408-50532184	1	-	50530441	50532077	789624	6	152,141,122,105,133,216,	0,303,528,782,1161,1560,
#Deleted in new
chr22	50530425	50532108	chr22:50530425-50532108	1	-	50530479	50532077	789624	5	135,141,122,105,140,	0,286,511,765,1543,
#Deleted in new
chr22	50530440	50532147	chr22:50530440-50532147	1	-	50530441	50532077	789624	6	120,141,122,151,204,179,	0,271,496,750,1129,1528,
#Deleted in new
chr22	50530479	50532077	chr22:50530479-50532077	1	-	50530479	50532077	789624	6	81,141,122,105,204,109,	0,232,457,711,1090,1489,
#Deleted in new
chr22	50530538	50531423	chr22:50530538-50531423	0	-	50530538	50530538	8553170	2	520,233,	0,652,
#Deleted in new
chr22	50530637	50531679	chr22:50530637-50531679	0	-	50530637	50530637	8553170	3	421,105,110,	0,553,932,
#Deleted in new
chr22	50531744	50532580	chr22:50531744-50532580	0	-	50531744	50532077	789624	3	29,143,104,	0,224,732,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	50542304	50542906	chr22:50542304-50542906	3	-	50542304	50542304	8553170	1	602,	0,
#Partially deleted in new
chr22	50542649	50543011	chr22:50542649-50543011	3	+	50542649	50542649	8553170	1	362,	0,
#Deleted in new
chr22	50545890	50551023	chr22:50545890-50551023	1	+	50546243	50549951	8553170	1	5133,	0,
#Deleted in new
chr22	50546414	50547652	chr22:50546414-50547652	0	+	50546414	50546414	8553170	2	72,85,	0,1153,
#Deleted in new
chr22	50548032	50551022	chr22:50548032-50551022	3	+	50548166	50549951	789624	1	2990,	0,
#Partially deleted in new
chr22	50551111	50562905	chr22:50551111-50562905	3	-	50551244	50556405	789624	3	291,109,48,	0,5185,11746,
#Partially deleted in new
chr22	50551196	50556432	chr22:50551196-50556432	1	-	50551244	50556405	789624	2	206,136,	0,5100,
#Partially deleted in new
chr22	50568860	50578020	chr22:50568860-50578020	1	-	50569337	50577915	789624	19	221,86,93,114,153,135,165,117,106,186,196,85,108,78,138,102,178,140,246,	0,475,715,1432,2030,2297,2514,3145,3342,4014,4659,5474,5632,7174,7337,7675,7996,8463,8914,
#Partially deleted in new
chr22	50568861	50578417	chr22:50568861-50578417	3	-	50569337	50577915	789624	20	220,86,93,114,153,135,165,117,106,186,196,85,108,78,138,102,178,140,160,32,	0,474,714,1431,2029,2296,2513,3144,3341,4013,4658,5473,5631,7173,7336,7674,7995,8462,8913,9524,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr22	50568868	50582965	chr22:50568868-50582965	0	-	50568868	50568868	789624	27	213,255,93,114,153,130,165,117,106,186,196,85,108,78,138,102,178,140,160,220,82,104,109,227,96,134,1217,	0,298,707,1424,2022,2289,2506,3137,3334,4006,4651,5466,5624,7166,7329,7667,7988,8455,8906,10167,10557,10858,11105,11321,11696,12551,12880,
#Partially deleted in new
chr22	50568994	50579752	chr22:50568994-50579752	3	-	50579180	50579752	789624	23	87,86,93,114,153,135,159,117,106,186,196,85,108,78,138,58,178,140,160,111,220,82,26,	0,341,581,1298,1896,2163,2380,3011,3208,3880,4525,5340,5498,7040,7203,7541,7862,8329,8780,9554,10041,10431,10732,
#Partially deleted in new
chr22	50569083	50578455	chr22:50569083-50578455	1	-	50569337	50577915	789624	19	338,93,114,153,135,165,117,106,186,196,85,108,78,138,102,178,140,160,70,	0,492,1209,1807,2074,2291,2922,3119,3791,4436,5251,5409,6951,7114,7452,7773,8240,8691,9302,
#Partially deleted in new
chr22	50569337	50577915	chr22:50569337-50577915	1	-	50569337	50577915	789624	18	84,93,114,153,135,165,117,106,186,196,85,108,78,138,102,178,140,141,	0,238,955,1553,1820,2037,2668,2865,3537,4182,4997,5155,6697,6860,7198,7519,7986,8437,
#Partially deleted in new
chr22	50569337	50577915	chr22:50569337-50577915	1	-	50569337	50577915	789624	17	84,93,114,153,135,165,117,106,186,196,85,108,78,138,178,140,141,	0,238,955,1553,1820,2037,2668,2865,3537,4182,4997,5155,6697,6860,7519,7986,8437,
#Deleted in new
chr22	50570347	50572297	chr22:50570347-50572297	0	-	50570347	50570347	8553170	5	59,153,382,117,95,	0,543,810,1658,1855,
#Partially deleted in new
chr22	50571882	50573100	chr22:50571882-50573100	0	-	50571882	50571882	8553170	3	240,106,226,	0,320,992,
#Partially deleted in new
chr22	50572874	50576064	chr22:50572874-50576064	0	-	50573865	50576064	789624	6	186,196,114,85,108,30,	0,645,933,1460,1618,3160,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	50574364	50574982	chr22:50574364-50574982	0	-	50574364	50574364	8553170	2	55,490,	0,128,
#Deleted in new
chr22	50576055	50576903	chr22:50576055-50576903	0	-	50576055	50576055	8553170	3	57,138,368,	0,142,480,
#Deleted in new
chr22	50576625	50578465	chr22:50576625-50578465	0	-	50576625	50576625	8553170	4	409,108,160,80,	0,730,1149,1760,
#Deleted in new
chr22	50576706	50577868	chr22:50576706-50577868	0	-	50576706	50576706	8553170	3	328,140,94,	0,617,1068,
#Deleted in new
chr22	50576939	50578246	chr22:50576939-50578246	0	-	50576939	50577915	789624	4	95,140,160,163,	0,384,835,1144,
#Deleted in new
chr22	50577818	50579999	chr22:50577818-50579999	0	-	50577818	50577818	8553170	6	116,111,220,33,40,26,	0,730,1217,1607,1972,2155,
#Partially deleted in new
chr22	50578948	50582999	chr22:50578948-50582999	3	-	50579180	50582781	0	11	307,82,104,109,82,59,96,134,114,109,442,	0,477,778,1025,1241,1409,1616,2471,2800,3300,3609,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	50578958	50582854	chr22:50578958-50582854	0	-	50578958	50578958	8553170	9	297,82,104,109,82,59,96,134,1106,	0,467,768,1015,1231,1399,1606,2461,2790,
#Deleted in new
chr22	50578962	50580253	chr22:50578962-50580253	0	-	50578962	50578962	8553170	5	293,82,76,109,64,	0,463,764,1011,1227,
#Deleted in new
chr22	50578962	50580603	chr22:50578962-50580603	0	-	50578962	50578962	8553170	7	293,82,76,26,82,59,39,	0,463,764,1094,1227,1395,1602,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	50578962	50582845	chr22:50578962-50582845	0	-	50578962	50578962	8553170	10	293,82,104,109,82,59,96,134,609,288,	0,463,764,1011,1227,1395,1602,2457,2786,3595,
#Partially deleted in new
chr22	50578962	50582824	chr22:50578962-50582824	0	-	50578962	50578962	8553170	8	293,82,104,109,82,59,96,576,	0,463,764,1011,1227,1395,1602,3286,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	50578965	50582820	chr22:50578965-50582820	0	-	50578965	50578965	8553170	8	290,82,104,109,227,96,134,1072,	0,460,761,1008,1224,1599,2454,2783,
#Partially deleted in new
chr22	50579449	50582458	chr22:50579449-50582458	0	-	50579449	50579449	8553170	8	58,104,109,227,96,134,114,210,	0,277,524,740,1115,1970,2299,2799,
#Deleted in new
chr22	50579803	50580780	chr22:50579803-50580780	0	-	50579803	50579803	8553170	3	279,227,216,	0,386,761,
#Partially deleted in new
chr22	50580356	50582854	chr22:50580356-50582854	0	-	50580356	50580356	8553170	5	60,96,134,114,606,	0,208,1063,1392,1892,
#Partially deleted in new
chr22	50581606	50582420	chr22:50581606-50582420	0	-	50581606	50581606	8553170	2	256,172,	0,642,
#Deleted in new
chr22	50583025	50583877	chr22:50583025-50583877	1	+	50583025	50583025	789624	2	298,280,	0,572,
#Partially deleted in new
chr22	50583155	50587640	chr22:50583155-50587640	3	+	50583155	50583155	8553170	4	168,110,110,371,	0,3374,3687,4114,
#Deleted in new
chr22	50597151	50597599	chr22:50597151-50597599	3	+	50597151	50597151	8553170	1	448,	0,
#Deleted in new
chr22	50600684	50611551	chr22:50600684-50611551	3	+	50600818	50610779	789624	12	199,106,276,94,1224,76,173,110,108,71,99,845,	0,1104,2538,2941,3156,4683,4877,5140,5973,6236,9527,10022,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	50603132	50613981	chr22:50603132-50613981	0	+	50603132	50603132	8553170	10	366,94,1224,76,173,110,108,71,99,3275,	0,493,708,2235,2429,2692,3525,3788,7079,7574,
#Partially deleted in new
chr22	50622753	50623326	chr22:50622753-50623326	0	-	50622753	50622753	8553170	1	573,	0,
#Deleted in new
chr22	50625017	50628172	chr22:50625017-50628172	3	-	50625144	50627779	789624	8	447,103,128,125,170,219,241,617,	0,561,918,1136,1573,1816,2148,2538,
#Deleted in new
chr22	50625017	50628170	chr22:50625017-50628170	1	-	50625144	50627779	789624	9	447,103,128,125,170,219,241,237,225,	0,561,918,1136,1573,1816,2148,2538,2928,
#Deleted in new
chr22	50625027	50628155	chr22:50625027-50628155	1	-	50625144	50627779	789624	9	437,103,128,125,170,219,241,237,258,	0,551,908,1126,1563,1806,2138,2528,2870,
#Deleted in new
chr22	50625028	50628173	chr22:50625028-50628173	1	-	50625144	50627372	789624	8	436,103,128,125,170,219,241,228,	0,550,907,1125,1562,1805,2137,2917,
#Deleted in new
chr22	50625032	50628159	chr22:50625032-50628159	1	-	50625144	50627779	789624	9	432,103,128,125,170,219,241,237,169,	0,546,903,1121,1558,1801,2133,2523,2958,
#Deleted in new
chr22	50626590	50628170	chr22:50626590-50628170	0	-	50626590	50626590	8553170	2	816,615,	0,965,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	50669803	50669901	chr22:50669803-50669901	3	+	50669803	50669803	8553170	1	98,	0,
#Partially deleted in new
chr22	50674414	50733298	chr22:50674414-50733298	0	+	50674414	50674414	8553170	23	290,204,72,109,152,168,117,78,67,274,152,114,76,83,125,133,81,24,131,85,2254,27,2578,	0,633,2207,4170,4354,4604,4897,8925,10170,20360,23149,24275,29445,29751,30323,30549,31657,37200,40502,41254,45769,49712,56306,
#Partially deleted in new
chr22	50674641	50733210	chr22:50674641-50733210	3	+	50674641	50731312	789624	25	63,204,72,109,152,168,117,78,67,274,5,11,24,151,114,76,83,125,133,81,24,131,85,2254,2490,	0,406,1980,3943,4127,4377,4670,8698,9943,20133,21286,22262,22602,22923,24048,29218,29524,30096,30322,31430,36973,40275,41027,45542,56079,
#Partially deleted in new
chr22	50674641	50731312	chr22:50674641-50731312	1	+	50674641	50731312	789624	23	63,204,72,109,152,168,117,78,67,275,20,152,114,76,83,125,133,81,24,131,85,2254,592,	0,406,1980,3943,4127,4377,4670,8698,9943,20133,20411,22922,24048,29218,29524,30096,30322,31430,36973,40275,41027,45542,56079,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr22	50691259	50691363	chr22:50691259-50691363	3	-	50691259	50691259	8553170	1	104,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr22	50735824	50738139	chr22:50735824-50738139	3	-	50735824	50735824	789624	2	1280,750,	0,1565,
#Partially deleted in new
chr22	50738195	50745334	chr22:50738195-50745334	3	+	50738235	50745207	789624	5	117,204,284,146,682,	0,1075,1498,5865,6457,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	50738195	50740359	chr22:50738195-50740359	0	+	50738195	50738195	8553170	3	117,204,666,	0,1075,1498,
#Partially deleted in new
chr22	50738229	50740757	chr22:50738229-50740757	1	+	50738235	50740694	789624	4	83,204,284,137,	0,1041,1464,2391,
#Partially deleted in new
chr22	50740592	50743520	chr22:50740592-50743520	3	-	50740592	50740592	8553170	2	248,36,	0,2892,
#Deleted in new
chr22	50744143	50744910	chr22:50744143-50744910	0	+	50744143	50744143	8553170	2	63,365,	0,402,
#Partially deleted in new
chr22	50754674	50755434	chr22:50754674-50755434	7	-	50754674	50754674	16724991	1	760,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr22	50756947	50789186	chr22:50756947-50789186	7	+	50756947	50756947	16724991	4	379,175,121,437,	0,26172,28225,31802,
#Partially deleted in new
chr22	50767500	50783662	chr22:50767500-50783662	3	-	50768775	50782294	789624	10	208,115,84,95,112,80,80,30,160,162,	0,1259,1540,1954,2404,8271,9169,10451,14687,16000,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	50767503	50783621	chr22:50767503-50783621	1	-	50768775	50782294	789624	9	1371,84,98,112,80,80,30,164,121,	0,1537,1951,2401,8268,9166,10448,14684,15997,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	50767505	50783662	chr22:50767505-50783662	1	-	50768775	50782294	789624	7	1369,84,98,80,30,164,162,	0,1535,1949,9164,10446,14682,15995,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	50767505	50783642	chr22:50767505-50783642	1	-	50768775	50782294	789624	10	1369,84,125,112,80,80,30,164,155,142,	0,1535,1919,2399,8266,9164,10446,14682,15385,15995,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr22	50767505	50783663	chr22:50767505-50783663	1	-	50768775	50782294	789624	10	1369,84,98,112,80,80,30,164,248,163,	0,1535,1949,2399,8266,9164,10446,14682,15533,15995,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr22	50767505	50783659	chr22:50767505-50783659	1	-	50768775	50782294	789624	9	1369,84,95,112,80,80,30,160,159,	0,1535,1949,2399,8266,9164,10446,14682,15995,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr22	50767505	50782314	chr22:50767505-50782314	0	-	50769543	50782294	789624	7	1369,84,98,80,80,30,127,	0,1535,1949,8266,9164,10446,14682,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	50767508	50770502	chr22:50767508-50770502	0	-	50767508	50767508	8553170	3	1366,84,1048,	0,1532,1946,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr22	50767529	50783638	chr22:50767529-50783638	0	-	50769543	50782294	789624	8	1345,84,128,80,80,30,164,138,	0,1511,1895,8242,9140,10422,14658,15971,
#Partially deleted in new
chr22	50769526	50775833	chr22:50769526-50775833	0	-	50769526	50769526	8553170	2	490,62,	0,6245,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	50769781	50783286	chr22:50769781-50783286	0	-	50769781	50769781	8553170	6	235,80,80,30,164,242,	0,5990,6888,8170,12406,13263,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr22	50771209	50783630	chr22:50771209-50783630	1	-	50773106	50782294	789624	6	1900,80,80,30,160,130,	0,4562,5460,6742,10978,12291,
#Partially deleted in new
chr22	50775770	50783600	chr22:50775770-50783600	0	-	50780705	50782294	789624	6	81,80,30,106,164,100,	0,899,2181,4842,6417,7730,
#Partially deleted in new
chr22	50777659	50783630	chr22:50777659-50783630	0	-	50777659	50777659	8553170	3	322,160,130,	0,4528,5841,
#Deleted in new
chr22	50782233	50783045	chr22:50782233-50783045	0	-	50782233	50782294	789624	2	114,277,	0,535,
#Partially deleted in new
chr22	50783253	50799305	chr22:50783253-50799305	4	+	50783253	50783253	16724991	3	41,121,651,	0,1919,15401,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	50783756	50799434	chr22:50783756-50799434	4	+	50783756	50783756	16724991	3	108,121,780,	0,1416,14898,
#Partially deleted in new
chr22	50783774	50788954	chr22:50783774-50788954	4	+	50783774	50783774	16724991	4	298,121,49,60,	0,1398,4975,5120,
#Partially deleted in new
chr22	50783796	50789353	chr22:50783796-50789353	4	+	50783796	50783796	16724991	4	225,121,49,462,	0,1376,4953,5095,
#Partially deleted in new
chr22	50783811	50789172	chr22:50783811-50789172	4	+	50783811	50783811	16724991	4	210,121,49,278,	0,1361,4938,5083,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr22	50783861	50801309	chr22:50783861-50801309	5	+	50783861	50783861	16724991	3	211,121,2655,	0,1311,14793,
#Partially deleted in new
chr22	50798654	50799123	chr22:50798654-50799123	5	+	50798654	50798654	16724991	1	469,	0,
#Deleted in new
chr22_GL383582v2_alt	2035	5698	chr22_GL383582v2_alt:2035-5698	0	+	2113	4306	789624	3	215,141,235,	0,2234,3428,
#Deleted in new
chr22_GL383582v2_alt	2039	6629	chr22_GL383582v2_alt:2039-6629	3	+	2113	4407	789624	3	260,141,1166,	0,2230,3424,
#Deleted in new
chr22_GL383582v2_alt	2244	46445	chr22_GL383582v2_alt:2244-46445	0	+	2244	2244	8553170	3	55,141,54,	0,2025,44147,
#Deleted in new
chr22_GL383582v2_alt	2244	46445	chr22_GL383582v2_alt:2244-46445	0	+	2244	2244	8553170	2	55,54,	0,44147,
#Deleted in new
chr22_GL383582v2_alt	7869	13300	chr22_GL383582v2_alt:7869-13300	3	-	8527	13167	0	3	790,116,350,	0,1535,5081,
#Deleted in new
chr22_GL383582v2_alt	8460	9680	chr22_GL383582v2_alt:8460-9680	1	-	8527	9488	789624	2	199,276,	0,944,
#Deleted in new
chr22_GL383582v2_alt	13300	47694	chr22_GL383582v2_alt:13300-47694	0	+	13300	13300	8553170	4	226,304,516,475,	0,341,33091,33919,
#Deleted in new
chr22_GL383582v2_alt	13358	47696	chr22_GL383582v2_alt:13358-47696	3	+	13358	13358	789624	5	168,304,114,516,477,	0,283,1105,33033,33861,
#Deleted in new
chr22_GL383582v2_alt	13746	47347	chr22_GL383582v2_alt:13746-47347	0	+	13746	13746	8553170	5	199,114,84,43,128,	0,717,32645,33118,33473,
#Deleted in new
chr22_GL383582v2_alt	30109	31298	chr22_GL383582v2_alt:30109-31298	7	-	30109	30109	16724991	1	1189,	0,
#Deleted in new
chr22_GL383582v2_alt	46625	50120	chr22_GL383582v2_alt:46625-50120	3	-	46625	46625	8553170	3	232,119,316,	0,1554,3179,
#Deleted in new
chr22_GL383582v2_alt	50395	54742	chr22_GL383582v2_alt:50395-54742	1	-	50470	54657	789624	9	254,142,188,142,177,161,153,172,266,	0,352,949,1331,1665,2276,2525,3207,4081,
#Deleted in new
chr22_GL383582v2_alt	50395	54768	chr22_GL383582v2_alt:50395-54768	1	-	50470	54657	8553170	9	254,142,245,142,177,161,153,172,292,	0,352,949,1331,1665,2276,2525,3207,4081,
#Deleted in new
chr22_GL383582v2_alt	50397	54747	chr22_GL383582v2_alt:50397-54747	1	-	50470	54657	789624	9	252,142,188,142,177,161,172,45,225,	0,350,947,1329,1663,2274,3205,4079,4125,
#Deleted in new
chr22_GL383582v2_alt	50397	54770	chr22_GL383582v2_alt:50397-54770	3	-	50470	54657	789624	11	252,142,216,26,142,177,161,153,172,45,248,	0,350,947,1166,1329,1663,2274,2523,3205,4079,4125,
#Deleted in new
chr22_GL383582v2_alt	52929	54192	chr22_GL383582v2_alt:52929-54192	0	-	52929	52929	8553170	3	144,172,257,	0,673,1006,
#Deleted in new
chr22_GL383582v2_alt	53476	54742	chr22_GL383582v2_alt:53476-54742	0	-	53476	53476	8553170	2	298,266,	0,1000,
#Deleted in new
chr22_GL383582v2_alt	60078	65195	chr22_GL383582v2_alt:60078-65195	7	-	60078	60078	16724991	9	179,142,185,142,177,163,153,172,177,	0,277,869,1258,1586,2210,2461,3143,4940,
#Deleted in new
chr22_GL383582v2_alt	70203	125638	chr22_GL383582v2_alt:70203-125638	3	-	78845	125501	789624	5	1346,128,50,94,5792,	0,8598,9835,19586,49643,
#Deleted in new
chr22_GL383582v2_alt	71246	125636	chr22_GL383582v2_alt:71246-125636	1	-	71531	125501	789624	4	303,50,94,5790,	0,8792,18543,48600,
#Deleted in new
chr22_GL383582v2_alt	71288	120404	chr22_GL383582v2_alt:71288-120404	1	-	78845	120404	789624	5	261,95,50,94,558,	0,7513,8750,18501,48558,
#Deleted in new
chr22_GL383582v2_alt	125042	125537	chr22_GL383582v2_alt:125042-125537	0	-	125042	125501	789624	1	495,	0,
#Deleted in new
chr22_GL383583v2_alt	36933	40415	chr22_GL383583v2_alt:36933-40415	3	+	36933	36933	8553170	2	86,592,	0,2890,
#Deleted in new
chr22_GL383583v2_alt	64819	64834	chr22_GL383583v2_alt:64819-64834	7	+	64819	64819	16724991	1	15,	0,
#Deleted in new
chr22_GL383583v2_alt	68448	69124	chr22_GL383583v2_alt:68448-69124	0	+	68448	68448	8553170	2	110,456,	0,220,
#Deleted in new
chr22_GL383583v2_alt	68458	78544	chr22_GL383583v2_alt:68458-78544	3	+	73399	78213	0	6	100,133,145,295,116,346,	0,4837,6787,8632,9343,9740,
#Deleted in new
chr22_GL383583v2_alt	73229	78546	chr22_GL383583v2_alt:73229-78546	1	+	73399	78213	0	5	199,145,295,116,348,	0,2016,3861,4572,4969,
#Deleted in new
chr22_GL383583v2_alt	73229	75390	chr22_GL383583v2_alt:73229-75390	0	+	73229	73229	8553170	2	199,145,	0,2016,
#Deleted in new
chr22_GL383583v2_alt	77317	83977	chr22_GL383583v2_alt:77317-83977	3	-	77317	77317	8553170	5	60,184,66,257,124,	0,848,1388,5931,6536,
#Deleted in new
chr22_KB663609v1_alt	2035	5698	chr22_KB663609v1_alt:2035-5698	0	+	2113	4306	789624	3	215,141,235,	0,2234,3428,
#Deleted in new
chr22_KB663609v1_alt	2039	6629	chr22_KB663609v1_alt:2039-6629	3	+	2113	4407	789624	3	260,141,1166,	0,2230,3424,
#Deleted in new
chr22_KB663609v1_alt	2044	4570	chr22_KB663609v1_alt:2044-4570	0	+	2044	2044	8553170	2	255,301,	0,2225,
#Deleted in new
chr22_KB663609v1_alt	7869	13300	chr22_KB663609v1_alt:7869-13300	3	-	8527	13167	8553170	3	790,116,350,	0,1535,5081,
#Deleted in new
chr22_KB663609v1_alt	7869	13124	chr22_KB663609v1_alt:7869-13124	1	-	8527	13089	0	3	790,116,174,	0,1535,5081,
#Deleted in new
chr22_KB663609v1_alt	8460	9680	chr22_KB663609v1_alt:8460-9680	1	-	8527	9488	789624	2	199,276,	0,944,
#Deleted in new
chr22_KB663609v1_alt	11974	12373	chr22_KB663609v1_alt:11974-12373	3	-	11974	11974	8553170	1	399,	0,
#Deleted in new
chr22_KB663609v1_alt	13275	71181	chr22_KB663609v1_alt:13275-71181	1	+	13275	13275	8553170	6	251,304,114,516,533,495,	0,366,1188,45255,46083,57411,
#Deleted in new
chr22_KB663609v1_alt	13311	13941	chr22_KB663609v1_alt:13311-13941	0	+	13311	13311	8553170	2	215,295,	0,335,
#Deleted in new
chr22_KB663609v1_alt	13311	47286	chr22_KB663609v1_alt:13311-47286	2	+	13311	13311	8553170	5	215,304,84,86,85,	0,330,33063,33492,33890,
#Deleted in new
chr22_KB663609v1_alt	13548	47286	chr22_KB663609v1_alt:13548-47286	0	+	13548	13548	8553170	6	397,85,96,84,86,85,	0,21102,31572,32826,33255,33653,
#Deleted in new
chr22_KB663609v1_alt	13696	47286	chr22_KB663609v1_alt:13696-47286	1	+	13696	13696	8553170	7	249,96,66,39,84,43,85,	0,31424,32157,32397,32678,33150,33505,
#Deleted in new
chr22_KB663609v1_alt	13746	47329	chr22_KB663609v1_alt:13746-47329	0	+	13746	13746	8553170	5	199,114,84,43,128,	0,717,32628,33100,33455,
#Deleted in new
chr22_KB663609v1_alt	30109	31298	chr22_KB663609v1_alt:30109-31298	7	-	30109	30109	16724991	1	1189,	0,
#Deleted in new
chr22_KB663609v1_alt	40600	47226	chr22_KB663609v1_alt:40600-47226	0	+	40600	40600	8553170	4	237,84,43,25,	0,5774,6246,6601,
#Deleted in new
chr22_KB663609v1_alt	40691	47226	chr22_KB663609v1_alt:40691-47226	0	+	40691	40691	8553170	5	146,66,84,43,25,	0,5162,5683,6155,6510,
#Deleted in new
chr22_KB663609v1_alt	40691	59046	chr22_KB663609v1_alt:40691-59046	0	+	40691	40691	8553170	3	146,93,516,	0,1671,17839,
#Deleted in new
chr22_KB663609v1_alt	40843	47226	chr22_KB663609v1_alt:40843-47226	0	+	40843	40843	8553170	5	38,96,84,43,25,	0,4277,5531,6003,6358,
#Deleted in new
chr22_KB663609v1_alt	46061	47355	chr22_KB663609v1_alt:46061-47355	0	+	46061	46061	8553170	3	397,43,154,	0,785,1140,
#Deleted in new
chr22_KB663609v1_alt	48825	53233	chr22_KB663609v1_alt:48825-53233	3	-	48900	53118	789624	9	254,142,188,142,177,161,153,172,295,	0,352,948,1343,1675,2285,2534,3239,4113,
#Deleted in new
chr22_KB663609v1_alt	48827	53208	chr22_KB663609v1_alt:48827-53208	1	-	48900	53118	789624	8	252,142,188,142,177,161,172,270,	0,350,946,1341,1673,2283,3237,4111,
#Deleted in new
chr22_KB663609v1_alt	54360	57571	chr22_KB663609v1_alt:54360-57571	0	+	54360	54360	8553170	5	160,233,51,81,105,	0,339,1009,1299,3106,
#Deleted in new
chr22_KB663609v1_alt	54379	59382	chr22_KB663609v1_alt:54379-59382	1	+	54379	54379	8553170	8	141,233,51,105,66,84,43,24,	0,320,990,3087,3630,4151,4624,4979,
#Deleted in new
chr22_KB663609v1_alt	54872	55328	chr22_KB663609v1_alt:54872-55328	7	+	54872	54872	16724991	1	456,	0,
#Deleted in new
chr22_KB663609v1_alt	60984	65365	chr22_KB663609v1_alt:60984-65365	1	-	61057	65275	789624	8	252,142,188,142,177,161,172,270,	0,350,946,1341,1673,2283,3237,4111,
#Deleted in new
chr22_KB663609v1_alt	60984	65365	chr22_KB663609v1_alt:60984-65365	3	-	61057	65275	789624	9	252,142,188,142,177,161,153,172,270,	0,350,946,1341,1673,2283,2532,3237,4111,
#Deleted in new
chr22_KB663609v1_alt	70920	72583	chr22_KB663609v1_alt:70920-72583	3	-	70920	70920	8553170	2	232,119,	0,1544,
#Deleted in new
chr22_KI270731v1_random	10597	13001	chr22_KI270731v1_random:10597-13001	3	-	11287	12574	8553170	1	2404,	0,
#Deleted in new
chr22_KI270731v1_random	26532	27138	chr22_KI270731v1_random:26532-27138	7	-	26532	26532	16724991	2	135,468,	0,138,
#Deleted in new
chr22_KI270733v1_random	122135	122225	chr22_KI270733v1_random:122135-122225	3	+	122135	122135	8553170	1	90,	0,
#Deleted in new
chr22_KI270733v1_random	128876	129029	chr22_KI270733v1_random:128876-129029	3	+	128876	128876	789624	1	153,	0,
#Deleted in new
chr22_KI270733v1_random	167217	167307	chr22_KI270733v1_random:167217-167307	3	+	167217	167217	8553170	1	90,	0,
#Deleted in new
chr22_KI270733v1_random	173955	174108	chr22_KI270733v1_random:173955-174108	3	+	173955	173955	789624	1	153,	0,
#Deleted in new
chr22_KI270734v1_random	59710	60316	chr22_KI270734v1_random:59710-60316	7	+	59710	59710	16724991	2	468,135,	0,471,
#Deleted in new
chr22_KI270734v1_random	72410	74814	chr22_KI270734v1_random:72410-74814	3	+	72837	74124	789624	1	2404,	0,
#Deleted in new
chr22_KI270734v1_random	131493	137392	chr22_KI270734v1_random:131493-137392	3	+	131645	136994	789624	5	262,161,101,141,548,	0,342,3949,4665,5351,
#Deleted in new
chr22_KI270734v1_random	138081	161750	chr22_KI270734v1_random:138081-161750	1	-	138479	156446	8553170	14	586,89,99,176,147,93,82,80,117,65,150,35,209,62,	0,661,4112,5532,6667,6922,8558,9542,10034,10332,12268,12905,18207,23607,
#Deleted in new
chr22_KI270734v1_random	138081	161852	chr22_KI270734v1_random:138081-161852	3	-	138479	161586	8553170	15	586,89,99,176,147,93,82,80,117,65,150,35,209,313,164,	0,661,4112,5532,6667,6922,8558,9542,10034,10332,12268,12905,18207,23232,23607,
#Deleted in new
chr22_KI270875v1_alt	2536	3056	chr22_KI270875v1_alt:2536-3056	3	+	2564	3056	789624	2	74,323,	0,197,
#Deleted in new
chr22_KI270875v1_alt	7317	7898	chr22_KI270875v1_alt:7317-7898	3	+	7431	7898	789624	2	160,306,	0,275,
#Deleted in new
chr22_KI270875v1_alt	21570	22042	chr22_KI270875v1_alt:21570-22042	3	+	21604	22042	789624	2	80,305,	0,167,
#Deleted in new
chr22_KI270875v1_alt	23581	24074	chr22_KI270875v1_alt:23581-24074	7	+	23581	23581	16724991	2	45,336,	0,157,
#Deleted in new
chr22_KI270875v1_alt	29139	29631	chr22_KI270875v1_alt:29139-29631	3	+	29139	29631	789624	2	46,323,	0,169,
#Deleted in new
chr22_KI270875v1_alt	34498	34649	chr22_KI270875v1_alt:34498-34649	7	+	34498	34498	16724991	1	151,	0,
#Deleted in new
chr22_KI270875v1_alt	39854	40369	chr22_KI270875v1_alt:39854-40369	7	+	39854	39854	16724991	2	99,307,	0,208,
#Deleted in new
chr22_KI270875v1_alt	45414	45931	chr22_KI270875v1_alt:45414-45931	3	+	45465	45931	789624	2	97,310,	0,207,
#Deleted in new
chr22_KI270875v1_alt	55963	56948	chr22_KI270875v1_alt:55963-56948	7	+	55963	55963	16724991	1	985,	0,
#Deleted in new
chr22_KI270875v1_alt	61458	61952	chr22_KI270875v1_alt:61458-61952	7	+	61458	61458	16724991	2	49,336,	0,158,
#Deleted in new
chr22_KI270875v1_alt	63176	63672	chr22_KI270875v1_alt:63176-63672	3	+	63181	63672	789624	2	51,323,	0,173,
#Deleted in new
chr22_KI270875v1_alt	67596	68104	chr22_KI270875v1_alt:67596-68104	3	+	67636	68104	789624	2	86,307,	0,201,
#Deleted in new
chr22_KI270875v1_alt	82324	83975	chr22_KI270875v1_alt:82324-83975	7	+	82324	82324	16724991	1	1651,	0,
#Deleted in new
chr22_KI270875v1_alt	85840	86291	chr22_KI270875v1_alt:85840-86291	7	+	85840	85840	16724991	2	34,306,	0,145,
#Deleted in new
chr22_KI270875v1_alt	101298	101626	chr22_KI270875v1_alt:101298-101626	7	+	101298	101298	16724991	1	328,	0,
#Deleted in new
chr22_KI270875v1_alt	120077	144811	chr22_KI270875v1_alt:120077-144811	3	-	123423	125055	789624	4	5046,118,61,496,	0,9642,23389,24238,
#Deleted in new
chr22_KI270875v1_alt	120514	144390	chr22_KI270875v1_alt:120514-144390	0	-	123423	125055	789624	5	1121,2606,118,61,75,	0,2003,9205,22952,23801,
#Deleted in new
chr22_KI270875v1_alt	120529	125125	chr22_KI270875v1_alt:120529-125125	1	-	123423	125055	789624	2	1106,2608,	0,1988,
#Deleted in new
chr22_KI270875v1_alt	149392	155927	chr22_KI270875v1_alt:149392-155927	3	-	149658	151287	789624	2	1966,182,	0,6353,
#Deleted in new
chr22_KI270875v1_alt	183357	194997	chr22_KI270875v1_alt:183357-194997	3	-	183723	192489	789624	6	943,609,323,119,36,166,	0,2025,3066,9111,9844,11474,
#Deleted in new
chr22_KI270875v1_alt	183357	195018	chr22_KI270875v1_alt:183357-195018	0	-	183357	183357	8553170	5	943,609,323,769,187,	0,2025,3066,9111,11474,
#Deleted in new
chr22_KI270875v1_alt	183358	194800	chr22_KI270875v1_alt:183358-194800	1	-	183723	192489	789624	6	942,609,323,119,36,173,	0,2024,3065,9110,9843,11269,
#Deleted in new
chr22_KI270875v1_alt	183360	194800	chr22_KI270875v1_alt:183360-194800	1	-	183723	192489	789624	6	940,609,323,98,36,173,	0,2022,3063,9108,9841,11267,
#Deleted in new
chr22_KI270875v1_alt	183423	194945	chr22_KI270875v1_alt:183423-194945	1	-	183723	192489	789624	6	877,609,323,98,36,114,	0,1959,3000,9045,9778,11408,
#Deleted in new
chr22_KI270875v1_alt	185730	194936	chr22_KI270875v1_alt:185730-194936	0	-	185730	192489	789624	5	261,323,166,36,105,	0,693,6738,7471,9101,
#Deleted in new
chr22_KI270875v1_alt	185839	191583	chr22_KI270875v1_alt:185839-191583	0	-	185839	186719	789624	3	152,323,91,	0,584,5653,
#Deleted in new
chr22_KI270875v1_alt	185877	194740	chr22_KI270875v1_alt:185877-194740	0	-	185877	192489	789624	5	114,323,119,36,113,	0,546,6591,7324,8750,
#Deleted in new
chr22_KI270875v1_alt	185902	193378	chr22_KI270875v1_alt:185902-193378	0	-	185902	185902	8553170	3	89,323,177,	0,521,7299,
#Deleted in new
chr22_KI270875v1_alt	185955	189836	chr22_KI270875v1_alt:185955-189836	0	-	185955	185955	8553170	3	36,323,350,	0,468,3531,
#Deleted in new
chr22_KI270875v1_alt	186423	194924	chr22_KI270875v1_alt:186423-194924	0	-	186423	192489	789624	4	323,275,36,93,	0,6045,6778,8408,
#Deleted in new
chr22_KI270875v1_alt	186475	193249	chr22_KI270875v1_alt:186475-193249	0	-	186475	186475	8553170	4	271,143,119,48,	0,1990,5993,6726,
#Deleted in new
chr22_KI270875v1_alt	186508	193411	chr22_KI270875v1_alt:186508-193411	0	-	186508	192489	789624	3	238,119,210,	0,5960,6693,
#Deleted in new
chr22_KI270875v1_alt	194999	202259	chr22_KI270875v1_alt:194999-202259	3	+	194999	194999	789624	3	65,110,2936,	0,3520,4324,
#Deleted in new
chr22_KI270875v1_alt	215498	215953	chr22_KI270875v1_alt:215498-215953	7	+	215498	215498	16724991	2	46,292,	0,163,
#Deleted in new
chr22_KI270875v1_alt	223811	224345	chr22_KI270875v1_alt:223811-224345	3	+	223869	224345	789624	2	104,308,	0,226,
#Deleted in new
chr22_KI270875v1_alt	230184	230713	chr22_KI270875v1_alt:230184-230713	3	+	230223	230713	789624	2	82,301,	0,228,
#Deleted in new
chr22_KI270875v1_alt	240101	240822	chr22_KI270875v1_alt:240101-240822	7	+	240101	240101	16724991	2	36,261,	0,460,
#Deleted in new
chr22_KI270875v1_alt	254228	254820	chr22_KI270875v1_alt:254228-254820	7	+	254228	254228	16724991	2	40,258,	0,334,
#Deleted in new
chr22_KI270876v1_alt	706	4140	chr22_KI270876v1_alt:706-4140	3	+	706	706	8553170	2	75,526,	0,2908,
#Deleted in new
chr22_KI270876v1_alt	18569	18943	chr22_KI270876v1_alt:18569-18943	7	+	18569	18569	16724991	1	374,	0,
#Deleted in new
chr22_KI270876v1_alt	32638	44250	chr22_KI270876v1_alt:32638-44250	3	+	32638	43665	789624	5	55,87,984,182,130,	0,2696,8339,10851,11482,
#Deleted in new
chr22_KI270876v1_alt	59733	161585	chr22_KI270876v1_alt:59733-161585	1	-	65192	161216	789624	12	5514,73,89,133,93,54,61,93,54,147,225,396,	0,7187,7737,21152,22466,22679,26687,29521,39289,42864,71044,101456,
#Deleted in new
chr22_KI270876v1_alt	64599	161405	chr22_KI270876v1_alt:64599-161405	1	-	65202	161216	789624	13	648,73,89,40,145,93,54,61,93,54,144,225,216,	0,2321,2871,12503,16286,17600,17813,21821,24655,34423,37998,66178,96590,
#Deleted in new
chr22_KI270876v1_alt	64599	161216	chr22_KI270876v1_alt:64599-161216	1	-	65192	161216	789624	12	648,73,89,145,93,54,61,93,54,144,225,27,	0,2321,2871,16286,17600,17813,21821,24655,34423,37998,66178,96590,
#Deleted in new
chr22_KI270876v1_alt	64931	161405	chr22_KI270876v1_alt:64931-161405	1	-	65202	161216	789624	12	316,73,89,40,133,93,54,61,93,144,225,216,	0,1989,2539,12171,15954,17268,17481,21489,24323,37666,65846,96258,
#Deleted in new
chr22_KI270876v1_alt	64955	131002	chr22_KI270876v1_alt:64955-131002	1	-	65202	130969	789624	12	292,73,89,40,133,93,54,61,93,54,147,225,	0,1965,2515,12147,15930,17244,17457,21465,24299,34067,37642,65822,
#Deleted in new
chr22_KI270876v1_alt	64980	259895	chr22_KI270876v1_alt:64980-259895	3	-	65192	130969	789624	14	267,73,89,32,40,133,93,54,61,93,54,144,225,51,	0,1940,2490,6443,12122,15905,17219,17432,21440,24274,34042,37617,65797,194864,
#Deleted in new
chr22_KI270876v1_alt	65075	89347	chr22_KI270876v1_alt:65075-89347	0	-	65202	89347	789624	9	172,73,89,43,133,93,54,61,93,	0,1845,2395,8535,15810,17124,17337,21345,24179,
#Deleted in new
chr22_KI270876v1_alt	65084	69630	chr22_KI270876v1_alt:65084-69630	0	-	65084	65084	8553170	3	163,73,2160,	0,1836,2386,
#Deleted in new
chr22_KI270876v1_alt	65145	161282	chr22_KI270876v1_alt:65145-161282	1	-	65202	161216	789624	13	102,73,89,40,133,93,54,61,93,54,144,225,93,	0,1775,2325,11957,15740,17054,17267,21275,24109,33877,37452,65632,96044,
#Deleted in new
chr22_KI270876v1_alt	65202	259895	chr22_KI270876v1_alt:65202-259895	0	-	65202	259895	789624	13	45,73,89,40,145,93,54,61,93,54,147,225,51,	0,1718,2268,11900,15683,16997,17210,21218,24052,33820,37395,65575,194642,
#Deleted in new
chr22_KI270876v1_alt	81007	145371	chr22_KI270876v1_alt:81007-145371	0	-	81007	130969	789624	9	11,93,54,61,93,54,144,225,54,	0,1192,1405,5413,8247,18015,21590,49770,64310,
#Deleted in new
chr22_KI270876v1_alt	89265	259895	chr22_KI270876v1_alt:89265-259895	0	-	89265	259895	789624	5	82,54,147,225,51,	0,9757,13332,41512,170579,
#Deleted in new
chr22_KI270876v1_alt	98653	161401	chr22_KI270876v1_alt:98653-161401	0	-	98653	98653	8553170	4	423,144,225,212,	0,3944,32124,62536,
#Deleted in new
chr22_KI270876v1_alt	99025	161411	chr22_KI270876v1_alt:99025-161411	0	-	99025	130969	789624	5	48,144,225,120,222,	0,3572,31752,58292,62164,
#Deleted in new
chr22_KI270877v1_alt	21470	40266	chr22_KI270877v1_alt:21470-40266	1	-	21676	37792	0	5	235,110,133,68,49,	0,12962,14419,16261,18747,
#Deleted in new
chr22_KI270877v1_alt	21470	37822	chr22_KI270877v1_alt:21470-37822	3	-	21676	37792	0	4	235,110,133,91,	0,12962,14419,16261,
#Deleted in new
chr22_KI270877v1_alt	21487	37788	chr22_KI270877v1_alt:21487-37788	0	-	32291	37788	789624	5	218,50,110,133,57,	0,10774,12945,14402,16244,
#Deleted in new
chr22_KI270877v1_alt	21553	36178	chr22_KI270877v1_alt:21553-36178	1	-	21676	35987	789624	4	152,110,133,27,	0,12879,14336,14598,
#Deleted in new
chr22_KI270877v1_alt	34236	37822	chr22_KI270877v1_alt:34236-37822	0	-	34236	34236	8553170	3	306,133,91,	0,1653,3495,
#Deleted in new
chr22_KI270877v1_alt	34432	38301	chr22_KI270877v1_alt:34432-38301	0	-	34432	37792	789624	4	110,133,68,159,	0,1457,3299,3710,
#Deleted in new
chr22_KI270877v1_alt	37112	40523	chr22_KI270877v1_alt:37112-40523	3	+	37112	37112	8553170	3	115,398,36,	0,2056,3375,
#Deleted in new
chr22_KI270877v1_alt	68158	94392	chr22_KI270877v1_alt:68158-94392	3	-	68158	68158	8553170	2	645,349,	0,25885,
#Deleted in new
chr22_KI270877v1_alt	78810	94331	chr22_KI270877v1_alt:78810-94331	0	-	78810	78810	8553170	2	223,288,	0,15233,
#Deleted in new
chr22_KI270877v1_alt	81781	101331	chr22_KI270877v1_alt:81781-101331	3	+	81965	99700	789624	9	216,85,154,71,128,58,99,442,77,	0,6206,7080,9561,12584,13821,14496,17499,19473,
#Deleted in new
chr22_KI270877v1_alt	81781	99460	chr22_KI270877v1_alt:81781-99460	0	+	91380	99460	789624	7	216,154,71,128,58,99,180,	0,7080,9561,12584,13821,14496,17499,
#Deleted in new
chr22_KI270877v1_alt	81781	101331	chr22_KI270877v1_alt:81781-101331	0	+	81965	101331	789624	10	216,85,154,71,128,58,99,131,66,77,	0,6206,7080,9561,12584,13821,14496,17499,17875,19473,
#Deleted in new
chr22_KI270877v1_alt	81965	99700	chr22_KI270877v1_alt:81965-99700	1	+	81965	99700	789624	8	32,85,154,71,128,58,99,420,	0,6022,6896,9377,12400,13637,14312,17315,
#Deleted in new
chr22_KI270877v1_alt	96087	101331	chr22_KI270877v1_alt:96087-101331	0	+	96087	96087	8553170	4	118,99,442,77,	0,190,3193,5167,
#Deleted in new
chr22_KI270878v1_alt	5560	22972	chr22_KI270878v1_alt:5560-22972	5	-	5560	5560	16724991	7	151,69,141,105,105,154,134,	0,3501,6675,9177,10755,13992,17278,
#Deleted in new
chr22_KI270878v1_alt	12259	22854	chr22_KI270878v1_alt:12259-22854	4	-	12259	12259	16724991	4	117,105,119,16,	0,4056,7328,10579,
#Deleted in new
chr22_KI270878v1_alt	16052	33689	chr22_KI270878v1_alt:16052-33689	7	-	16052	16052	16724991	5	368,119,134,317,36,	0,3535,6786,11868,17601,
#Deleted in new
chr22_KI270878v1_alt	16052	26710	chr22_KI270878v1_alt:16052-26710	4	-	16052	16052	16724991	4	368,119,134,28,	0,3535,6786,10630,
#Deleted in new
chr22_KI270878v1_alt	19605	23029	chr22_KI270878v1_alt:19605-23029	4	-	19605	19605	16724991	2	101,191,	0,3233,
#Deleted in new
chr22_KI270878v1_alt	36563	48684	chr22_KI270878v1_alt:36563-48684	7	-	36563	36563	16724991	3	1119,824,366,	0,9154,11755,
#Deleted in new
chr22_KI270878v1_alt	36563	48525	chr22_KI270878v1_alt:36563-48525	5	-	36563	36563	16724991	5	1119,824,113,119,207,	0,9154,11235,11431,11755,
#Deleted in new
chr22_KI270878v1_alt	37334	48530	chr22_KI270878v1_alt:37334-48530	4	-	37334	37334	16724991	6	348,107,132,824,113,212,	0,1350,2549,8383,10464,10984,
#Deleted in new
chr22_KI270878v1_alt	38542	45566	chr22_KI270878v1_alt:38542-45566	4	-	38542	38542	16724991	4	249,132,29,25,	0,1341,5493,6999,
#Deleted in new
chr22_KI270878v1_alt	38728	39797	chr22_KI270878v1_alt:38728-39797	7	+	38728	38728	16724991	5	303,108,99,58,61,	0,403,597,867,1008,
#Deleted in new
chr22_KI270878v1_alt	43895	48115	chr22_KI270878v1_alt:43895-48115	5	-	43895	43895	16724991	4	169,1000,113,121,	0,1646,3903,4099,
#Deleted in new
chr22_KI270878v1_alt	79521	81029	chr22_KI270878v1_alt:79521-81029	3	+	79521	79521	789624	3	498,171,248,	0,996,1260,
#Deleted in new
chr22_KI270878v1_alt	80128	80689	chr22_KI270878v1_alt:80128-80689	0	+	80128	80128	8553170	2	165,172,	0,389,
#Deleted in new
chr22_KI270878v1_alt	92555	106746	chr22_KI270878v1_alt:92555-106746	7	+	92555	92555	16724991	2	205,436,	0,13755,
#Deleted in new
chr22_KI270878v1_alt	104336	106791	chr22_KI270878v1_alt:104336-106791	5	+	104336	104336	16724991	2	105,481,	0,1974,
#Deleted in new
chr22_KI270878v1_alt	106306	106469	chr22_KI270878v1_alt:106306-106469	5	+	106306	106306	16724991	1	163,	0,
#Deleted in new
chr22_KI270878v1_alt	108043	132939	chr22_KI270878v1_alt:108043-132939	3	-	108043	108043	789624	12	593,42,151,42,22,356,34,62,84,31,59,102,	0,5189,7251,7910,8229,8722,11292,11791,18332,20490,20983,24794,
#Deleted in new
chr22_KI270878v1_alt	182693	183802	chr22_KI270878v1_alt:182693-183802	3	-	182693	182693	8553170	2	150,327,	0,782,
#Deleted in new
chr22_KI270879v1_alt	448	2223	chr22_KI270879v1_alt:448-2223	0	+	448	2116	789624	5	87,143,75,110,141,	0,173,552,706,1634,
#Deleted in new
chr22_KI270879v1_alt	448	2223	chr22_KI270879v1_alt:448-2223	0	+	448	2090	789624	5	87,153,75,81,141,	0,173,552,1290,1634,
#Deleted in new
chr22_KI270879v1_alt	448	725	chr22_KI270879v1_alt:448-725	0	+	448	448	8553170	1	277,	0,
#Deleted in new
chr22_KI270879v1_alt	448	2223	chr22_KI270879v1_alt:448-2223	0	+	448	448	8553170	2	87,1623,	0,152,
#Deleted in new
chr22_KI270879v1_alt	448	2223	chr22_KI270879v1_alt:448-2223	0	+	448	2094	789624	5	87,138,75,110,141,	0,173,552,706,1634,
#Deleted in new
chr22_KI270879v1_alt	840	1316	chr22_KI270879v1_alt:840-1316	3	+	895	1294	789624	1	476,	0,
#Deleted in new
chr22_KI270879v1_alt	2195	4304	chr22_KI270879v1_alt:2195-4304	1	-	2368	4236	789624	4	193,169,220,109,	0,294,1540,2000,
#Deleted in new
chr22_KI270879v1_alt	2195	4805	chr22_KI270879v1_alt:2195-4805	3	-	2368	4236	789624	4	193,148,220,610,	0,294,1540,2000,
#Deleted in new
chr22_KI270879v1_alt	2195	4238	chr22_KI270879v1_alt:2195-4238	1	-	2510	4236	789624	3	193,148,43,	0,294,2000,
#Deleted in new
chr22_KI270879v1_alt	2235	2826	chr22_KI270879v1_alt:2235-2826	0	-	2235	2235	8553170	2	153,337,	0,254,
#Deleted in new
chr22_KI270879v1_alt	2296	4282	chr22_KI270879v1_alt:2296-4282	0	-	2545	4236	789624	4	92,148,167,87,	0,193,1439,1899,
#Deleted in new
chr22_KI270879v1_alt	4587	20678	chr22_KI270879v1_alt:4587-20678	0	+	4587	4587	8553170	8	568,182,1316,134,242,217,258,906,	0,2892,10961,12356,12633,12967,14000,15185,
#Deleted in new
chr22_KI270879v1_alt	5004	17369	chr22_KI270879v1_alt:5004-17369	0	+	5004	5004	8553170	6	151,121,230,144,134,149,	0,2544,10544,11716,11939,12216,
#Deleted in new
chr22_KI270879v1_alt	5021	17028	chr22_KI270879v1_alt:5021-17028	0	+	5021	5021	8553170	4	134,230,144,85,	0,10527,11699,11922,
#Deleted in new
chr22_KI270879v1_alt	9180	20678	chr22_KI270879v1_alt:9180-20678	3	+	9232	19906	789624	8	160,230,144,134,242,217,258,906,	0,6368,7540,7763,8040,8374,9407,10592,
#Deleted in new
chr22_KI270879v1_alt	9207	16059	chr22_KI270879v1_alt:9207-16059	0	+	9207	9207	8553170	2	133,511,	0,6341,
#Deleted in new
chr22_KI270879v1_alt	9207	16846	chr22_KI270879v1_alt:9207-16846	0	+	9207	9207	8553170	3	133,278,126,	0,6341,7513,
#Deleted in new
chr22_KI270879v1_alt	9210	20678	chr22_KI270879v1_alt:9210-20678	0	+	9232	18767	789624	8	130,182,144,134,242,217,116,906,	0,6338,7510,7733,8010,8344,9519,10562,
#Deleted in new
chr22_KI270879v1_alt	14002	17462	chr22_KI270879v1_alt:14002-17462	0	+	14002	14002	8553170	5	168,230,144,134,242,	0,1546,2718,2941,3218,
#Deleted in new
chr22_KI270879v1_alt	17241	19803	chr22_KI270879v1_alt:17241-19803	0	+	17241	18223	789624	4	221,217,696,31,	0,313,908,2531,
#Deleted in new
chr22_KI270879v1_alt	17302	18677	chr22_KI270879v1_alt:17302-18677	0	+	17302	17302	8553170	2	469,90,	0,1285,
#Deleted in new
chr22_KI270879v1_alt	17318	18113	chr22_KI270879v1_alt:17318-18113	0	+	17318	17318	8553170	2	144,559,	0,236,
#Deleted in new
chr22_KI270879v1_alt	17625	18990	chr22_KI270879v1_alt:17625-18990	0	+	17625	17625	8553170	2	146,403,	0,962,
#Deleted in new
chr22_KI270879v1_alt	18175	18845	chr22_KI270879v1_alt:18175-18845	0	+	18175	18175	8553170	2	112,258,	0,412,
#Deleted in new
chr22_KI270879v1_alt	18644	20320	chr22_KI270879v1_alt:18644-20320	3	-	18644	20320	789624	3	141,58,548,	0,143,1128,
#Deleted in new
chr22_KI270879v1_alt	23324	39784	chr22_KI270879v1_alt:23324-39784	0	+	23531	39784	789624	5	300,139,130,192,128,	0,4793,6596,13981,16332,
#Deleted in new
chr22_KI270879v1_alt	23324	70878	chr22_KI270879v1_alt:23324-70878	3	+	23531	70542	789624	9	300,112,130,192,128,167,191,132,376,	0,4793,6596,13981,16332,29807,38262,46609,47178,
#Deleted in new
chr22_KI270879v1_alt	23335	70878	chr22_KI270879v1_alt:23335-70878	1	+	23531	70542	0	9	289,139,130,138,128,167,191,132,376,	0,4782,6585,13970,16321,29796,38251,46598,47167,
#Deleted in new
chr22_KI270879v1_alt	23355	70878	chr22_KI270879v1_alt:23355-70878	1	+	23531	70542	0	9	269,112,130,138,128,167,191,132,376,	0,4762,6565,13950,16301,29776,38231,46578,47147,
#Deleted in new
chr22_KI270879v1_alt	23372	70545	chr22_KI270879v1_alt:23372-70545	1	+	23531	70542	789624	8	252,139,130,128,167,191,132,43,	0,4745,6548,16284,29759,38214,46561,47130,
#Deleted in new
chr22_KI270879v1_alt	29962	37822	chr22_KI270879v1_alt:29962-37822	0	+	29962	29962	8553170	2	88,517,	0,7343,
#Deleted in new
chr22_KI270879v1_alt	52730	61678	chr22_KI270879v1_alt:52730-61678	0	+	52730	52730	8553170	2	568,92,	0,8856,
#Deleted in new
chr22_KI270879v1_alt	70864	75368	chr22_KI270879v1_alt:70864-75368	1	-	73421	75349	789624	5	2715,39,94,153,112,	0,3313,3849,4061,4392,
#Deleted in new
chr22_KI270879v1_alt	70864	75368	chr22_KI270879v1_alt:70864-75368	3	-	71188	75349	789624	7	430,91,196,94,74,66,112,	0,2561,3156,3849,4061,4208,4392,
#Deleted in new
chr22_KI270879v1_alt	70864	75490	chr22_KI270879v1_alt:70864-75490	0	-	70864	70864	8553170	5	2652,73,308,74,418,	0,3156,3635,4061,4208,
#Deleted in new
chr22_KI270879v1_alt	70864	72876	chr22_KI270879v1_alt:70864-72876	0	-	70864	70864	8553170	2	430,215,	0,1797,
#Deleted in new
chr22_KI270879v1_alt	72826	74046	chr22_KI270879v1_alt:72826-74046	0	-	72826	72826	8553170	3	55,91,26,	0,599,1194,
#Deleted in new
chr22_KI270879v1_alt	73095	74060	chr22_KI270879v1_alt:73095-74060	0	-	73095	73095	8553170	3	229,91,52,	0,330,913,
#Deleted in new
chr22_KI270879v1_alt	73095	74565	chr22_KI270879v1_alt:73095-74565	0	-	73095	73095	8553170	4	229,91,73,66,	0,330,925,1404,
#Deleted in new
chr22_KI270879v1_alt	73095	75374	chr22_KI270879v1_alt:73095-75374	1	-	73421	75349	789624	6	421,196,94,74,66,118,	0,925,1618,1830,1977,2161,
#Deleted in new
chr22_KI270879v1_alt	73095	75366	chr22_KI270879v1_alt:73095-75366	1	-	73230	75349	789624	7	229,91,196,94,74,66,110,	0,330,925,1618,1830,1977,2161,
#Deleted in new
chr22_KI270879v1_alt	73128	75366	chr22_KI270879v1_alt:73128-75366	0	-	73128	73128	8553170	3	388,73,294,	0,892,1944,
#Deleted in new
chr22_KI270879v1_alt	92788	93401	chr22_KI270879v1_alt:92788-93401	3	-	92788	92788	8553170	1	613,	0,
#Deleted in new
chr22_KI270879v1_alt	93064	122671	chr22_KI270879v1_alt:93064-122671	1	+	93332	121211	789624	12	289,99,161,125,130,149,188,111,102,76,128,1661,	0,5401,11778,18414,20339,21018,25756,26056,27069,27246,27599,27946,
#Deleted in new
chr22_KI270879v1_alt	93224	106544	chr22_KI270879v1_alt:93224-106544	0	+	93224	93224	8553170	4	129,99,161,175,	0,5241,11618,13145,
#Deleted in new
chr22_KI270879v1_alt	93233	121898	chr22_KI270879v1_alt:93233-121898	1	+	93851	121211	789624	13	120,111,99,161,125,130,149,188,111,102,76,128,888,	0,549,5232,11609,18245,20170,20849,25587,25887,26900,27077,27430,27777,
#Deleted in new
chr22_KI270879v1_alt	93295	113690	chr22_KI270879v1_alt:93295-113690	1	+	93332	113537	789624	5	58,99,161,125,287,	0,5170,11547,18183,20108,
#Deleted in new
chr22_KI270879v1_alt	93307	119314	chr22_KI270879v1_alt:93307-119314	0	+	93307	93307	789624	9	46,111,99,161,125,130,149,188,194,	0,475,5158,11535,18171,20096,20775,25513,25813,
#Deleted in new
chr22_KI270879v1_alt	93312	119313	chr22_KI270879v1_alt:93312-119313	0	+	93312	93312	8553170	8	41,111,99,161,125,130,188,193,	0,470,5153,11530,18166,20091,25508,25808,
#Deleted in new
chr22_KI270879v1_alt	93318	121913	chr22_KI270879v1_alt:93318-121913	0	+	93318	93318	8553170	9	35,99,161,121,130,188,111,658,903,	0,5147,11524,18164,20085,25502,25802,26815,27692,
#Deleted in new
chr22_KI270879v1_alt	93318	121295	chr22_KI270879v1_alt:93318-121295	0	+	93332	111498	789624	11	35,99,161,121,130,188,111,102,76,128,285,	0,5147,11524,18164,20085,25502,25802,26815,26992,27345,27692,
#Deleted in new
chr22_KI270879v1_alt	93361	122474	chr22_KI270879v1_alt:93361-122474	1	+	93851	121308	789624	11	532,99,161,125,130,149,188,111,151,128,1490,	0,5104,11481,18117,20042,20721,25459,25759,26874,27302,27623,
#Deleted in new
chr22_KI270879v1_alt	93361	111573	chr22_KI270879v1_alt:93361-111573	0	+	93361	93361	8553170	4	532,99,161,95,	0,5104,11481,18117,
#Deleted in new
chr22_KI270879v1_alt	93697	98687	chr22_KI270879v1_alt:93697-98687	0	+	93697	93697	8553170	2	196,222,	0,4768,
#Deleted in new
chr22_KI270879v1_alt	93778	113649	chr22_KI270879v1_alt:93778-113649	0	+	93851	111498	789624	5	115,99,161,121,246,	0,4687,11064,17704,19625,
#Deleted in new
chr22_KI270879v1_alt	93832	111551	chr22_KI270879v1_alt:93832-111551	0	+	93851	104102	789624	5	61,99,165,161,73,	0,4633,10264,11010,17646,
#Deleted in new
chr22_KI270879v1_alt	94236	105158	chr22_KI270879v1_alt:94236-105158	0	+	94236	94236	8553170	3	155,99,316,	0,4229,10606,
#Deleted in new
chr22_KI270879v1_alt	94256	113534	chr22_KI270879v1_alt:94256-113534	0	+	94361	111498	789624	5	135,99,161,157,131,	0,4209,10586,17190,19147,
#Deleted in new
chr22_KI270879v1_alt	94280	121915	chr22_KI270879v1_alt:94280-121915	0	+	94497	113879	789624	12	238,99,161,125,130,485,188,111,102,76,128,905,	0,4185,10562,17198,19123,19466,24540,24840,25853,26030,26383,26730,
#Deleted in new
chr22_KI270879v1_alt	94322	121898	chr22_KI270879v1_alt:94322-121898	0	+	94322	94322	8553170	9	69,99,161,125,130,188,1266,128,888,	0,4143,10520,17156,19081,24498,24798,26341,26688,
#Deleted in new
chr22_KI270879v1_alt	94324	121229	chr22_KI270879v1_alt:94324-121229	3	+	94361	121211	789624	12	67,99,161,125,130,149,188,111,102,76,128,219,	0,4141,10518,17154,19079,19758,24496,24796,25809,25986,26339,26686,
#Deleted in new
chr22_KI270879v1_alt	98549	131585	chr22_KI270879v1_alt:98549-131585	3	+	98549	131427	789624	6	15,161,125,130,173,184,	0,6293,12929,14854,32584,32852,
#Deleted in new
chr22_KI270879v1_alt	101609	109639	chr22_KI270879v1_alt:101609-109639	3	-	101609	101609	8553170	1	8030,	0,
#Deleted in new
chr22_KI270879v1_alt	111521	119314	chr22_KI270879v1_alt:111521-119314	0	+	111521	111521	8553170	4	82,130,152,194,	0,1882,7335,7599,
#Deleted in new
chr22_KI270879v1_alt	114219	121146	chr22_KI270879v1_alt:114219-121146	0	+	114219	114219	8553170	6	12,188,111,76,128,136,	0,4601,4901,6091,6444,6791,
#Deleted in new
chr22_KI270879v1_alt	115854	116152	chr22_KI270879v1_alt:115854-116152	3	-	115854	115854	8553170	1	298,	0,
#Deleted in new
chr22_KI270879v1_alt	116770	119669	chr22_KI270879v1_alt:116770-119669	0	+	116770	116770	8553170	2	2238,549,	0,2350,
#Deleted in new
chr22_KI270879v1_alt	119321	121898	chr22_KI270879v1_alt:119321-121898	0	+	119321	119321	8553170	2	1470,888,	0,1689,
#Deleted in new
chr22_KI270879v1_alt	130365	131588	chr22_KI270879v1_alt:130365-131588	1	+	130836	131468	0	3	579,173,187,	0,768,1036,
#Deleted in new
chr22_KI270879v1_alt	130787	135292	chr22_KI270879v1_alt:130787-135292	3	-	130787	130787	789624	3	1107,282,87,	0,1403,4418,
#Deleted in new
chr22_KI270879v1_alt	130811	131589	chr22_KI270879v1_alt:130811-131589	2	+	130811	130811	8553170	2	133,456,	0,322,
#Deleted in new
chr22_KI270879v1_alt	131059	131589	chr22_KI270879v1_alt:131059-131589	0	+	131059	131059	8553170	2	247,188,	0,342,
#Deleted in new
chr22_KI270879v1_alt	137793	143430	chr22_KI270879v1_alt:137793-143430	3	-	137793	137793	8553170	1	5637,	0,
#Deleted in new
chr22_KI270879v1_alt	163261	165936	chr22_KI270879v1_alt:163261-165936	7	+	163261	163261	16724991	3	430,972,361,	0,727,2314,
#Deleted in new
chr22_KI270879v1_alt	176359	179160	chr22_KI270879v1_alt:176359-179160	7	+	176359	176359	16724991	3	154,180,198,	0,1074,2603,
#Deleted in new
chr22_KI270879v1_alt	186279	190404	chr22_KI270879v1_alt:186279-190404	7	+	186279	186279	16724991	3	88,45,156,	0,2256,3969,
#Deleted in new
chr22_KI270879v1_alt	193779	197568	chr22_KI270879v1_alt:193779-197568	3	-	194084	197493	0	5	515,174,151,88,187,	0,867,1133,2876,3602,
#Deleted in new
chr22_KI270879v1_alt	200141	200736	chr22_KI270879v1_alt:200141-200736	7	+	200141	200141	16724991	2	139,115,	0,480,
#Deleted in new
chr22_KI270879v1_alt	203263	208896	chr22_KI270879v1_alt:203263-208896	3	+	203277	207770	789624	3	122,176,1247,	0,485,4386,
#Deleted in new
chr22_KI270879v1_alt	205574	206237	chr22_KI270879v1_alt:205574-206237	3	+	205574	205574	8553170	1	663,	0,
#Deleted in new
chr22_KI270879v1_alt	207728	216194	chr22_KI270879v1_alt:207728-216194	1	-	207914	210778	0	4	259,176,133,103,	0,2403,2942,8363,
#Deleted in new
chr22_KI270879v1_alt	207728	210948	chr22_KI270879v1_alt:207728-210948	1	-	207914	210778	0	3	259,176,278,	0,2403,2942,
#Deleted in new
chr22_KI270879v1_alt	207733	209547	chr22_KI270879v1_alt:207733-209547	0	-	207914	209547	789624	2	254,79,	0,1735,
#Deleted in new
chr22_KI270879v1_alt	207741	216835	chr22_KI270879v1_alt:207741-216835	3	-	207914	213258	789624	5	246,176,133,192,58,	0,2390,2929,5500,9036,
#Deleted in new
chr22_KI270879v1_alt	209438	210797	chr22_KI270879v1_alt:209438-210797	1	-	209671	210778	0	3	273,176,127,	0,693,1232,
#Deleted in new
chr22_KI270879v1_alt	209442	210855	chr22_KI270879v1_alt:209442-210855	0	-	209442	209442	8553170	2	865,185,	0,1228,
#Deleted in new
chr22_KI270879v1_alt	209467	210823	chr22_KI270879v1_alt:209467-210823	1	-	209490	210778	789624	3	240,176,153,	0,664,1203,
#Deleted in new
chr22_KI270879v1_alt	213266	213951	chr22_KI270879v1_alt:213266-213951	7	-	213266	213266	16724991	2	169,181,	0,504,
#Deleted in new
chr22_KI270879v1_alt	216513	220281	chr22_KI270879v1_alt:216513-220281	3	+	216563	219972	0	5	162,88,151,174,519,	0,800,2480,2723,3249,
#Deleted in new
chr22_KI270879v1_alt	223685	227790	chr22_KI270879v1_alt:223685-227790	7	-	223685	223685	16724991	3	154,79,82,	0,1821,4023,
#Deleted in new
chr22_KI270879v1_alt	234772	241428	chr22_KI270879v1_alt:234772-241428	3	-	234910	241428	789624	5	336,177,151,88,112,	0,1671,2771,5055,6544,
#Deleted in new
chr22_KI270879v1_alt	234858	241525	chr22_KI270879v1_alt:234858-241525	0	-	234858	234858	8553170	4	250,177,88,1277,	0,1585,4969,5390,
#Deleted in new
chr22_KI270879v1_alt	236518	241433	chr22_KI270879v1_alt:236518-241433	0	-	240373	241428	789624	4	102,88,142,117,	0,3309,3730,4798,
#Deleted in new
chr22_KI270879v1_alt	244898	246255	chr22_KI270879v1_alt:244898-246255	7	-	244898	244898	16724991	3	169,79,118,	0,1083,1239,
#Deleted in new
chr22_KI270879v1_alt	259291	259749	chr22_KI270879v1_alt:259291-259749	3	-	259291	259749	789624	2	83,28,	0,430,
#Deleted in new
chr22_KI270879v1_alt	260926	265059	chr22_KI270879v1_alt:260926-265059	7	+	260926	260926	16724991	3	93,89,153,	0,2219,3980,
#Deleted in new
chr22_KI270879v1_alt	267286	267961	chr22_KI270879v1_alt:267286-267961	7	+	267286	267286	16724991	2	134,177,	0,498,
#Deleted in new
chr22_KI270879v1_alt	270313	278459	chr22_KI270879v1_alt:270313-278459	3	-	270597	278406	0	5	479,177,151,88,165,	0,683,3222,5561,7981,
#Deleted in new
chr22_KI270879v1_alt	270313	278442	chr22_KI270879v1_alt:270313-278442	0	-	273663	278406	789624	4	479,177,151,148,	0,683,3222,7981,
#Deleted in new
chr22_KI270879v1_alt	270313	278434	chr22_KI270879v1_alt:270313-278434	0	-	271169	278406	789624	5	479,177,90,88,140,	0,683,3222,5561,7981,
#Deleted in new
chr22_KI270879v1_alt	270498	278440	chr22_KI270879v1_alt:270498-278440	0	-	271147	278406	789624	3	294,177,146,	0,498,7796,
#Deleted in new
chr22_KI270879v1_alt	270567	278421	chr22_KI270879v1_alt:270567-278421	1	-	270597	278406	789624	5	225,177,88,109,127,	0,429,5307,6580,7727,
#Deleted in new
chr22_KI270879v1_alt	270661	278423	chr22_KI270879v1_alt:270661-278423	1	-	270674	278406	789624	3	131,88,129,	0,5213,7633,
#Deleted in new
chr22_KI270879v1_alt	270707	278427	chr22_KI270879v1_alt:270707-278427	0	-	270707	278406	789624	2	85,133,	0,7587,
#Deleted in new
chr22_KI270879v1_alt	270707	278427	chr22_KI270879v1_alt:270707-278427	0	-	273596	278406	789624	4	85,177,90,133,	0,289,2828,7587,
#Deleted in new
chr22_KI270879v1_alt	271089	278446	chr22_KI270879v1_alt:271089-278446	0	-	273650	278406	789624	5	84,151,88,109,152,	0,2446,4785,6058,7205,
#Deleted in new
chr22_KI270879v1_alt	274048	278486	chr22_KI270879v1_alt:274048-278486	0	-	274048	274048	8553170	2	1914,192,	0,4246,
#Deleted in new
chr22_KI270879v1_alt	274059	278436	chr22_KI270879v1_alt:274059-278436	0	-	274059	274059	8553170	1	4377,	0,
#Deleted in new
chr22_KI270879v1_alt	275879	278855	chr22_KI270879v1_alt:275879-278855	0	-	275879	278406	789624	3	83,129,347,	0,2415,2629,
#Deleted in new
chr22_KI270879v1_alt	276444	278446	chr22_KI270879v1_alt:276444-278446	0	-	276444	276444	8553170	2	1097,152,	0,1850,
#Deleted in new
chr22_KI270879v1_alt	277107	278446	chr22_KI270879v1_alt:277107-278446	0	-	277107	277107	8553170	2	434,152,	0,1187,
#Deleted in new
chr22_KI270879v1_alt	277294	278445	chr22_KI270879v1_alt:277294-278445	0	-	277294	277294	8553170	2	271,151,	0,1000,
#Deleted in new
chr22_KI270879v1_alt	288826	295977	chr22_KI270879v1_alt:288826-295977	3	-	288826	295977	789624	5	198,177,151,88,112,	0,1547,2968,5554,7039,
#Deleted in new
chr22_KI270879v1_alt	296858	298919	chr22_KI270879v1_alt:296858-298919	7	-	296858	296858	16724991	4	148,122,68,96,	0,762,1790,1965,
#Deleted in new
chr22_KI270879v1_alt	301816	301992	chr22_KI270879v1_alt:301816-301992	0	+	301816	301816	8553170	1	176,	0,
#Deleted in new
chr22_KI270879v1_alt	301939	301992	chr22_KI270879v1_alt:301939-301992	0	+	301939	301939	8553170	1	53,	0,
#Deleted in new
chr22_KI270879v1_alt	301972	301992	chr22_KI270879v1_alt:301972-301992	0	+	301972	301972	8553170	1	20,	0,
#Deleted in new
chr22_KI270879v1_alt	302040	302353	chr22_KI270879v1_alt:302040-302353	3	+	302040	302040	8553170	1	313,	0,
#Deleted in new
chr22_KI270879v1_alt	302042	302353	chr22_KI270879v1_alt:302042-302353	0	+	302042	302042	8553170	1	311,	0,
#Deleted in new
chr22_KI270928v1_alt	2035	5698	chr22_KI270928v1_alt:2035-5698	0	+	2113	4306	789624	3	215,141,235,	0,2234,3428,
#Deleted in new
chr22_KI270928v1_alt	2039	6629	chr22_KI270928v1_alt:2039-6629	3	+	2113	4407	789624	3	260,141,1166,	0,2230,3424,
#Deleted in new
chr22_KI270928v1_alt	2044	4570	chr22_KI270928v1_alt:2044-4570	0	+	2044	2044	8553170	2	255,301,	0,2225,
#Deleted in new
chr22_KI270928v1_alt	7869	13300	chr22_KI270928v1_alt:7869-13300	3	-	8527	13167	8553170	3	790,116,350,	0,1535,5081,
#Deleted in new
chr22_KI270928v1_alt	7869	13124	chr22_KI270928v1_alt:7869-13124	1	-	8527	13089	0	3	790,116,174,	0,1535,5081,
#Deleted in new
chr22_KI270928v1_alt	8460	9680	chr22_KI270928v1_alt:8460-9680	1	-	8527	9488	789624	2	199,276,	0,944,
#Deleted in new
chr22_KI270928v1_alt	11974	12373	chr22_KI270928v1_alt:11974-12373	3	-	11974	11974	8553170	1	399,	0,
#Deleted in new
chr22_KI270928v1_alt	13277	59041	chr22_KI270928v1_alt:13277-59041	1	+	13277	13277	789624	6	249,304,114,516,533,495,	0,364,1186,33113,33941,45269,
#Deleted in new
chr22_KI270928v1_alt	13300	47693	chr22_KI270928v1_alt:13300-47693	1	+	13300	13300	8553170	4	226,304,516,475,	0,341,33090,33918,
#Deleted in new
chr22_KI270928v1_alt	13311	13941	chr22_KI270928v1_alt:13311-13941	0	+	13311	13311	8553170	2	215,295,	0,335,
#Deleted in new
chr22_KI270928v1_alt	13311	47303	chr22_KI270928v1_alt:13311-47303	0	+	13311	13311	8553170	5	215,304,84,86,85,	0,330,33079,33509,33907,
#Deleted in new
chr22_KI270928v1_alt	13548	47303	chr22_KI270928v1_alt:13548-47303	1	+	13548	13548	8553170	6	397,85,96,84,86,85,	0,21102,31587,32842,33272,33670,
#Deleted in new
chr22_KI270928v1_alt	13696	47303	chr22_KI270928v1_alt:13696-47303	1	+	13696	13696	8553170	7	249,96,66,39,84,43,85,	0,31439,32173,32413,32694,33167,33522,
#Deleted in new
chr22_KI270928v1_alt	13746	47346	chr22_KI270928v1_alt:13746-47346	0	+	13746	13746	8553170	5	199,114,84,43,128,	0,717,32644,33117,33472,
#Deleted in new
chr22_KI270928v1_alt	30109	31298	chr22_KI270928v1_alt:30109-31298	7	-	30109	30109	16724991	1	1189,	0,
#Deleted in new
chr22_KI270928v1_alt	40600	47243	chr22_KI270928v1_alt:40600-47243	2	+	40600	40600	8553170	4	237,84,43,25,	0,5790,6263,6618,
#Deleted in new
chr22_KI270928v1_alt	40670	47243	chr22_KI270928v1_alt:40670-47243	0	+	40670	40670	8553170	3	167,516,25,	0,5720,6548,
#Deleted in new
chr22_KI270928v1_alt	40691	46906	chr22_KI270928v1_alt:40691-46906	1	+	40691	40691	8553170	3	146,93,516,	0,1689,5699,
#Deleted in new
chr22_KI270928v1_alt	40691	47243	chr22_KI270928v1_alt:40691-47243	0	+	40691	40691	8553170	5	146,66,84,43,25,	0,5178,5699,6172,6527,
#Deleted in new
chr22_KI270928v1_alt	40843	47243	chr22_KI270928v1_alt:40843-47243	0	+	40843	40843	8553170	5	38,96,84,43,25,	0,4292,5547,6020,6375,
#Deleted in new
chr22_KI270928v1_alt	43539	46906	chr22_KI270928v1_alt:43539-46906	0	+	43539	43539	8553170	6	539,96,66,39,84,43,	0,1596,2330,2570,2851,3324,
#Deleted in new
chr22_KI270928v1_alt	46077	47372	chr22_KI270928v1_alt:46077-47372	0	+	46077	46077	8553170	3	397,43,154,	0,786,1141,
#Deleted in new
chr22_KI270928v1_alt	48839	53247	chr22_KI270928v1_alt:48839-53247	3	-	48914	53132	789624	9	254,142,188,142,177,161,153,172,295,	0,352,948,1343,1675,2285,2534,3239,4113,
#Deleted in new
chr22_KI270928v1_alt	48839	52250	chr22_KI270928v1_alt:48839-52250	0	-	50242	52250	789624	7	254,142,188,93,177,161,172,	0,352,948,1343,1675,2285,3239,
#Deleted in new
chr22_KI270928v1_alt	48875	53154	chr22_KI270928v1_alt:48875-53154	0	-	48875	48875	8553170	8	218,142,188,142,177,161,153,1076,	0,316,912,1307,1639,2249,2498,3203,
#Deleted in new
chr22_KI270928v1_alt	48896	53206	chr22_KI270928v1_alt:48896-53206	1	-	48914	53132	0	8	197,142,188,142,177,161,172,254,	0,295,891,1286,1618,2228,3182,4056,
#Deleted in new
chr22_KI270928v1_alt	54376	57587	chr22_KI270928v1_alt:54376-57587	0	+	54376	54376	8553170	5	160,233,51,81,105,	0,339,1009,1299,3106,
#Deleted in new
chr22_KI270928v1_alt	54395	59398	chr22_KI270928v1_alt:54395-59398	1	+	54395	54395	8553170	8	141,233,51,105,66,84,43,24,	0,320,990,3087,3630,4151,4624,4979,
#Deleted in new
chr22_KI270928v1_alt	58780	62277	chr22_KI270928v1_alt:58780-62277	3	-	58780	58780	8553170	3	232,119,316,	0,1554,3181,
#Deleted in new
chr22_KI270928v1_alt	60407	62076	chr22_KI270928v1_alt:60407-62076	3	+	60407	60407	8553170	2	223,408,	0,1261,
#Deleted in new
chr22_KI270928v1_alt	62552	64273	chr22_KI270928v1_alt:62552-64273	0	-	63658	64273	789624	5	254,142,188,51,57,	0,352,948,1421,1664,
#Deleted in new
chr22_KI270928v1_alt	62552	66915	chr22_KI270928v1_alt:62552-66915	1	-	62627	66804	789624	9	254,142,245,142,177,161,153,172,292,	0,352,948,1330,1664,2266,2515,3197,4071,
#Deleted in new
chr22_KI270928v1_alt	62552	66810	chr22_KI270928v1_alt:62552-66810	1	-	62627	66804	8553170	9	254,142,188,142,177,161,153,172,187,	0,352,948,1330,1664,2266,2515,3197,4071,
#Deleted in new
chr22_KI270928v1_alt	62554	66894	chr22_KI270928v1_alt:62554-66894	1	-	62627	66804	789624	9	252,142,188,142,177,161,172,45,225,	0,350,946,1328,1662,2264,3195,4069,4115,
#Deleted in new
chr22_KI270928v1_alt	62554	66917	chr22_KI270928v1_alt:62554-66917	3	-	62627	66804	789624	11	252,142,216,26,142,177,161,153,172,45,248,	0,350,946,1165,1328,1662,2264,2513,3195,4069,4115,
#Deleted in new
chr22_KI270928v1_alt	63590	66889	chr22_KI270928v1_alt:63590-66889	0	-	63590	63590	8553170	6	434,177,161,153,172,266,	0,626,1228,1477,2159,3033,
#Deleted in new
chr22_KI270928v1_alt	65076	66339	chr22_KI270928v1_alt:65076-66339	0	-	65076	65076	8553170	3	144,172,257,	0,673,1006,
#Deleted in new
chr22_KI270928v1_alt	65623	66889	chr22_KI270928v1_alt:65623-66889	0	-	65623	65623	8553170	2	298,266,	0,1000,
#Deleted in new
chr22_KI270928v1_alt	72215	77346	chr22_KI270928v1_alt:72215-77346	7	-	72215	72215	16724991	9	179,142,185,142,177,161,153,172,177,	0,277,869,1258,1586,2212,2461,3162,4954,
#Deleted in new
chr22_KI270928v1_alt	82357	137787	chr22_KI270928v1_alt:82357-137787	3	-	90997	137650	789624	5	1346,128,50,94,5792,	0,8596,9834,19596,49638,
#Deleted in new
chr22_KI270928v1_alt	83400	137785	chr22_KI270928v1_alt:83400-137785	1	-	83685	137650	789624	4	303,50,94,5790,	0,8791,18553,48595,
#Deleted in new
chr22_KI270928v1_alt	83442	132553	chr22_KI270928v1_alt:83442-132553	1	-	90997	132553	789624	5	261,95,50,94,558,	0,7511,8749,18511,48553,
#Deleted in new
chr22_KI270928v1_alt	137191	137686	chr22_KI270928v1_alt:137191-137686	0	-	137191	137650	789624	1	495,	0,
#Deleted in new
chr22_KN196485v1_alt	475	5916	chr22_KN196485v1_alt:475-5916	3	-	1133	5705	8553170	3	790,116,350,	0,1535,5091,
#Deleted in new
chr22_KN196485v1_alt	477	5845	chr22_KN196485v1_alt:477-5845	1	-	1133	5783	8553170	3	788,116,279,	0,1533,5089,
#Deleted in new
chr22_KN196485v1_alt	1066	2286	chr22_KN196485v1_alt:1066-2286	1	-	1133	2094	789624	2	199,276,	0,944,
#Deleted in new
chr22_KN196485v1_alt	4590	4989	chr22_KN196485v1_alt:4590-4989	3	-	4590	4590	8553170	1	399,	0,
#Deleted in new
chr22_KN196485v1_alt	22726	23915	chr22_KN196485v1_alt:22726-23915	7	-	22726	22726	16724991	1	1189,	0,
#Deleted in new
chr22_KN196485v1_alt	39242	42737	chr22_KN196485v1_alt:39242-42737	3	-	39242	39242	8553170	3	232,119,316,	0,1554,3179,
#Deleted in new
chr22_KN196485v1_alt	40869	42536	chr22_KN196485v1_alt:40869-42536	3	+	40869	40869	8553170	2	223,408,	0,1259,
#Deleted in new
chr22_KN196485v1_alt	44406	46383	chr22_KN196485v1_alt:44406-46383	1	-	44406	46383	789624	5	30,177,36,125,172,	0,271,873,910,1805,
#Deleted in new
chr22_KN196485v1_alt	44406	46383	chr22_KN196485v1_alt:44406-46383	3	-	44406	46383	789624	5	30,177,36,125,172,	0,271,873,910,1805,
#Deleted in new
chr22_KN196485v1_alt	52674	57805	chr22_KN196485v1_alt:52674-57805	7	-	52674	52674	16724991	9	179,142,185,142,177,163,153,172,177,	0,277,869,1258,1586,2210,2461,3162,4954,
#Deleted in new
chr22_KN196486v1_alt	12064	16472	chr22_KN196486v1_alt:12064-16472	1	-	12139	16357	789624	9	254,142,188,142,177,161,153,172,295,	0,352,948,1343,1675,2285,2534,3239,4113,
#Deleted in new
chr22_KN196486v1_alt	12064	15475	chr22_KN196486v1_alt:12064-15475	2	-	13467	15475	789624	7	254,142,188,93,177,161,172,	0,352,948,1343,1675,2285,3239,
#Deleted in new
chr22_KN196486v1_alt	12064	16371	chr22_KN196486v1_alt:12064-16371	1	-	12139	16357	789624	9	254,142,188,142,177,161,153,172,194,	0,352,948,1343,1675,2285,2534,3239,4113,
#Deleted in new
chr22_KN196486v1_alt	12064	16447	chr22_KN196486v1_alt:12064-16447	1	-	12139	16357	789624	9	254,142,188,142,177,161,153,172,270,	0,352,948,1343,1675,2285,2534,3239,4113,
#Deleted in new
chr22_KN196486v1_alt	12066	16447	chr22_KN196486v1_alt:12066-16447	1	-	12139	16291	789624	10	252,142,216,29,142,177,161,153,172,270,	0,350,946,1280,1341,1673,2283,2532,3237,4111,
#Deleted in new
chr22_KN196486v1_alt	12100	16379	chr22_KN196486v1_alt:12100-16379	0	-	12100	12100	8553170	8	218,142,188,142,177,161,153,1076,	0,316,912,1307,1639,2249,2498,3203,
#Deleted in new
chr22_KN196486v1_alt	12121	16431	chr22_KN196486v1_alt:12121-16431	1	-	12139	16357	789624	8	197,142,188,142,177,161,172,254,	0,295,891,1286,1618,2228,3182,4056,
#Deleted in new
chr22_KN196486v1_alt	31820	32276	chr22_KN196486v1_alt:31820-32276	7	+	31820	31820	16724991	1	456,	0,
#Deleted in new
chr22_KN196486v1_alt	35712	39209	chr22_KN196486v1_alt:35712-39209	3	-	35712	35712	8553170	3	232,119,316,	0,1554,3181,
#Deleted in new
chr22_KN196486v1_alt	37339	39008	chr22_KN196486v1_alt:37339-39008	3	+	37339	37339	8553170	2	223,408,	0,1261,
#Deleted in new
chr22_KN196486v1_alt	40877	42854	chr22_KN196486v1_alt:40877-42854	1	-	40877	42854	789624	5	30,177,36,125,172,	0,271,873,910,1805,
#Deleted in new
chr22_KN196486v1_alt	40877	42854	chr22_KN196486v1_alt:40877-42854	3	-	40877	42854	789624	5	30,177,36,125,172,	0,271,873,910,1805,
#Deleted in new
chr22_KN196486v1_alt	49174	54290	chr22_KN196486v1_alt:49174-54290	7	-	49174	49174	16724991	9	179,142,185,142,177,163,153,172,177,	0,277,869,1258,1586,2210,2461,3143,4939,
#Deleted in new
chr22_KQ458387v1_alt	12483	13672	chr22_KQ458387v1_alt:12483-13672	7	-	12483	12483	16724991	1	1189,	0,
#Deleted in new
chr22_KQ458387v1_alt	28999	32494	chr22_KQ458387v1_alt:28999-32494	3	-	28999	28999	8553170	3	232,119,316,	0,1554,3179,
#Deleted in new
chr22_KQ458387v1_alt	30626	32293	chr22_KQ458387v1_alt:30626-32293	3	+	30626	30626	8553170	2	223,408,	0,1259,
#Deleted in new
chr22_KQ458387v1_alt	32771	45770	chr22_KQ458387v1_alt:32771-45770	1	-	34160	45767	789624	7	252,142,188,93,177,161,175,	0,350,947,1329,1663,2274,12824,
#Deleted in new
chr22_KQ458387v1_alt	32771	45770	chr22_KQ458387v1_alt:32771-45770	3	-	34160	45767	789624	7	252,142,188,93,177,161,175,	0,350,947,1329,1663,2274,12824,
#Deleted in new
chr22_KQ458387v1_alt	52071	57187	chr22_KQ458387v1_alt:52071-57187	7	-	52071	52071	16724991	9	179,142,185,142,177,163,153,172,177,	0,277,869,1258,1586,2210,2461,3143,4939,
#Deleted in new
chr22_KQ458388v1_alt	1371	2560	chr22_KQ458388v1_alt:1371-2560	7	-	1371	1371	16724991	1	1189,	0,
#Deleted in new
chr22_KQ458388v1_alt	20087	24495	chr22_KQ458388v1_alt:20087-24495	1	-	20162	24380	789624	9	254,142,188,142,177,161,153,172,295,	0,352,948,1343,1675,2285,2534,3239,4113,
#Deleted in new
chr22_KQ458388v1_alt	20087	23498	chr22_KQ458388v1_alt:20087-23498	0	-	21490	23498	789624	7	254,142,188,93,177,161,172,	0,352,948,1343,1675,2285,3239,
#Deleted in new
chr22_KQ458388v1_alt	20087	24470	chr22_KQ458388v1_alt:20087-24470	3	-	20162	24380	789624	9	254,142,188,142,177,161,153,172,270,	0,352,948,1343,1675,2285,2534,3239,4113,
#Deleted in new
chr22_KQ458388v1_alt	20087	24394	chr22_KQ458388v1_alt:20087-24394	1	-	20162	24380	789624	9	254,142,188,142,177,161,153,172,194,	0,352,948,1343,1675,2285,2534,3239,4113,
#Deleted in new
chr22_KQ458388v1_alt	20089	24470	chr22_KQ458388v1_alt:20089-24470	1	-	20162	24314	789624	10	252,142,216,29,142,177,161,153,172,270,	0,350,946,1280,1341,1673,2283,2532,3237,4111,
#Deleted in new
chr22_KQ458388v1_alt	20123	24402	chr22_KQ458388v1_alt:20123-24402	0	-	20123	20123	8553170	8	218,142,188,142,177,161,153,1076,	0,316,912,1307,1639,2249,2498,3203,
#Deleted in new
chr22_KQ458388v1_alt	20144	24454	chr22_KQ458388v1_alt:20144-24454	1	-	20162	24380	789624	8	197,142,188,142,177,161,172,254,	0,295,891,1286,1618,2228,3182,4056,
#Deleted in new
chr22_KQ458388v1_alt	39843	40299	chr22_KQ458388v1_alt:39843-40299	7	+	39843	39843	16724991	1	456,	0,
#Deleted in new
chr22_KQ458388v1_alt	57440	60935	chr22_KQ458388v1_alt:57440-60935	3	-	57440	57440	8553170	3	232,119,316,	0,1554,3179,
#Deleted in new
chr22_KQ458388v1_alt	59067	60734	chr22_KQ458388v1_alt:59067-60734	3	+	59067	59067	8553170	2	223,408,	0,1259,
#Deleted in new
chr22_KQ458388v1_alt	61210	62932	chr22_KQ458388v1_alt:61210-62932	0	-	62317	62932	789624	5	254,142,188,51,57,	0,352,949,1422,1665,
#Deleted in new
chr22_KQ458388v1_alt	61210	65557	chr22_KQ458388v1_alt:61210-65557	1	-	61287	65472	789624	9	254,142,188,142,177,161,153,172,266,	0,352,949,1331,1665,2276,2525,3207,4081,
#Deleted in new
chr22_KQ458388v1_alt	61210	65585	chr22_KQ458388v1_alt:61210-65585	3	-	61287	65472	8553170	9	254,142,245,142,177,161,153,172,294,	0,352,949,1331,1665,2276,2525,3207,4081,
#Deleted in new
chr22_KQ458388v1_alt	61212	65585	chr22_KQ458388v1_alt:61212-65585	1	-	61285	65472	789624	11	252,142,216,26,142,177,161,153,172,45,248,	0,350,947,1166,1329,1663,2274,2523,3205,4079,4125,
#Deleted in new
chr22_KQ458388v1_alt	61212	65562	chr22_KQ458388v1_alt:61212-65562	1	-	61285	65472	789624	9	252,142,188,142,177,161,172,45,225,	0,350,947,1329,1663,2274,3205,4079,4125,
#Deleted in new
chr22_KQ458388v1_alt	62249	65557	chr22_KQ458388v1_alt:62249-65557	0	-	62249	62249	8553170	6	434,177,161,153,172,266,	0,626,1237,1486,2168,3042,
#Deleted in new
chr22_KQ458388v1_alt	63744	65007	chr22_KQ458388v1_alt:63744-65007	0	-	63744	63744	8553170	3	144,172,257,	0,673,1006,
#Deleted in new
chr22_KQ458388v1_alt	64291	65557	chr22_KQ458388v1_alt:64291-65557	0	-	64291	64291	8553170	2	298,266,	0,1000,
#Deleted in new
chr22_KQ458388v1_alt	70894	76012	chr22_KQ458388v1_alt:70894-76012	7	-	70894	70894	16724991	9	179,142,185,142,177,163,153,172,177,	0,277,869,1258,1586,2210,2461,3143,4941,
#Deleted in new
chr22_KQ759761v1_alt	4239	7650	chr22_KQ759761v1_alt:4239-7650	0	-	5642	7650	789624	7	254,142,188,93,177,161,172,	0,352,948,1343,1675,2285,3239,
#Deleted in new
chr22_KQ759761v1_alt	4239	8647	chr22_KQ759761v1_alt:4239-8647	1	-	4314	8532	789624	9	254,142,188,142,177,161,153,172,295,	0,352,948,1343,1675,2285,2534,3239,4113,
#Deleted in new
chr22_KQ759761v1_alt	4239	8622	chr22_KQ759761v1_alt:4239-8622	1	-	4314	8532	789624	9	254,142,188,142,177,161,153,172,270,	0,352,948,1343,1675,2285,2534,3239,4113,
#Deleted in new
chr22_KQ759761v1_alt	4239	8546	chr22_KQ759761v1_alt:4239-8546	1	-	4314	8532	789624	9	254,142,188,142,177,161,153,172,194,	0,352,948,1343,1675,2285,2534,3239,4113,
#Deleted in new
chr22_KQ759761v1_alt	4241	8622	chr22_KQ759761v1_alt:4241-8622	1	-	4314	8466	789624	10	252,142,216,29,142,177,161,153,172,270,	0,350,946,1280,1341,1673,2283,2532,3237,4111,
#Deleted in new
chr22_KQ759761v1_alt	4275	8554	chr22_KQ759761v1_alt:4275-8554	0	-	4275	4275	8553170	8	218,142,188,142,177,161,153,1076,	0,316,912,1307,1639,2249,2498,3203,
#Deleted in new
chr22_KQ759761v1_alt	4296	8606	chr22_KQ759761v1_alt:4296-8606	3	-	4314	8532	789624	8	197,142,188,142,177,161,172,254,	0,295,891,1286,1618,2228,3182,4056,
#Deleted in new
chr22_KQ759761v1_alt	10285	10741	chr22_KQ759761v1_alt:10285-10741	7	+	10285	10285	16724991	1	456,	0,
#Deleted in new
chr22_KQ759761v1_alt	14177	17674	chr22_KQ759761v1_alt:14177-17674	3	-	14177	14177	8553170	3	232,119,316,	0,1554,3181,
#Deleted in new
chr22_KQ759761v1_alt	15804	17473	chr22_KQ759761v1_alt:15804-17473	3	+	15804	15804	8553170	2	223,408,	0,1261,
#Deleted in new
chr22_KQ759761v1_alt	19342	21319	chr22_KQ759761v1_alt:19342-21319	1	-	19342	21319	789624	5	30,177,36,125,172,	0,271,873,910,1805,
#Deleted in new
chr22_KQ759761v1_alt	19342	21319	chr22_KQ759761v1_alt:19342-21319	3	-	19342	21319	789624	5	30,177,36,125,172,	0,271,873,910,1805,
#Deleted in new
chr22_KQ759761v1_alt	33001	34978	chr22_KQ759761v1_alt:33001-34978	1	-	33001	34978	789624	5	30,177,36,125,172,	0,271,873,910,1805,
#Deleted in new
chr22_KQ759761v1_alt	33001	34978	chr22_KQ759761v1_alt:33001-34978	3	-	33001	34978	789624	5	30,177,36,125,172,	0,271,873,910,1805,
#Deleted in new
chr22_KQ759761v1_alt	41304	46422	chr22_KQ759761v1_alt:41304-46422	7	-	41304	41304	16724991	9	179,142,185,142,177,163,153,172,177,	0,277,869,1258,1586,2210,2461,3143,4941,
#Deleted in new
chr22_KQ759762v1_fix	5897	5995	chr22_KQ759762v1_fix:5897-5995	3	+	5897	5897	8553170	1	98,	0,
#Deleted in new
chr22_KQ759762v1_fix	10730	69326	chr22_KQ759762v1_fix:10730-69326	1	+	10730	67428	789624	22	63,204,72,109,152,168,117,78,67,274,194,114,76,83,125,133,81,24,131,85,2254,2490,	0,406,1988,3951,4135,4385,4678,8356,9914,19955,22988,24155,29326,29632,30204,30430,31539,37082,40384,41136,45569,56106,
#Deleted in new
chr22_KQ759762v1_fix	10730	69326	chr22_KQ759762v1_fix:10730-69326	3	+	10730	67428	789624	22	63,204,72,109,152,168,117,78,67,274,194,114,76,83,125,133,81,24,131,85,2254,2490,	0,406,1988,3951,4135,4385,4678,8356,9914,19955,22988,24155,29326,29632,30204,30430,31539,37082,40384,41136,45569,56106,
#Deleted in new
chr22_KQ759762v1_fix	27170	27274	chr22_KQ759762v1_fix:27170-27274	3	-	27170	27170	8553170	1	104,	0,
#Deleted in new
chr22_KQ759762v1_fix	74312	81445	chr22_KQ759762v1_fix:74312-81445	3	+	74352	81318	789624	5	117,204,284,146,682,	0,1075,1498,5859,6451,
#Deleted in new
chr22_KQ759762v1_fix	74312	76476	chr22_KQ759762v1_fix:74312-76476	0	+	74312	74312	8553170	3	117,204,666,	0,1075,1498,
#Deleted in new
chr22_KQ759762v1_fix	74346	76874	chr22_KQ759762v1_fix:74346-76874	1	+	74352	76811	8553170	4	83,204,284,137,	0,1041,1464,2391,
#Deleted in new
chr22_KQ759762v1_fix	76709	79631	chr22_KQ759762v1_fix:76709-79631	3	-	76709	76709	8553170	2	248,36,	0,2886,
#Deleted in new
chr22_KQ759762v1_fix	80254	81021	chr22_KQ759762v1_fix:80254-81021	0	+	80254	80254	8553170	2	63,365,	0,402,
#Deleted in new
chr22_KQ759762v1_fix	90786	91546	chr22_KQ759762v1_fix:90786-91546	7	-	90786	90786	16724991	1	760,	0,
#Deleted in new
chr2_GL383521v1_alt	6692	6873	chr2_GL383521v1_alt:6692-6873	0	-	6692	6873	789624	1	181,	0,
#Deleted in new
chr2_GL383521v1_alt	6692	6845	chr2_GL383521v1_alt:6692-6845	0	-	6692	6845	789624	1	153,	0,
#Deleted in new
chr2_GL383521v1_alt	6692	7390	chr2_GL383521v1_alt:6692-7390	3	-	6692	7023	789624	1	698,	0,
#Deleted in new
chr2_GL383521v1_alt	8201	8571	chr2_GL383521v1_alt:8201-8571	3	+	8201	8201	8553170	1	370,	0,
#Deleted in new
chr2_GL383521v1_alt	69518	69961	chr2_GL383521v1_alt:69518-69961	7	+	69518	69518	16724991	1	443,	0,
#Deleted in new
chr2_GL383522v1_alt	1109	34695	chr2_GL383522v1_alt:1109-34695	0	+	1109	34610	789624	12	63,99,126,171,99,126,109,89,126,115,90,222,	0,2755,11520,19364,19612,19807,23880,25221,28043,29327,30492,33364,
#Deleted in new
chr2_GL383522v1_alt	1109	34694	chr2_GL383522v1_alt:1109-34694	0	+	1109	34610	789624	11	63,99,126,99,126,109,89,126,115,90,221,	0,2755,11520,19612,19807,23880,25221,28043,29327,30492,33364,
#Deleted in new
chr2_GL383522v1_alt	1109	1171	chr2_GL383522v1_alt:1109-1171	0	+	1109	1109	8553170	1	62,	0,
#Deleted in new
chr2_GL383522v1_alt	1109	34610	chr2_GL383522v1_alt:1109-34610	0	+	1109	34610	789624	11	63,99,126,99,126,109,89,126,115,90,137,	0,2755,11520,19612,19807,23880,25221,28043,29327,30492,33364,
#Deleted in new
chr2_GL383522v1_alt	1109	34610	chr2_GL383522v1_alt:1109-34610	0	+	1109	34610	789624	11	63,99,126,99,126,109,89,126,115,90,137,	0,2755,11520,19612,19807,23880,25221,28043,29327,30492,33364,
#Deleted in new
chr2_GL383522v1_alt	1109	35154	chr2_GL383522v1_alt:1109-35154	1	+	1109	34610	789624	11	63,99,126,99,126,109,89,126,115,90,681,	0,2755,11520,19612,19807,23880,25221,28043,29327,30492,33364,
#Deleted in new
chr2_GL383522v1_alt	1109	20820	chr2_GL383522v1_alt:1109-20820	0	+	1109	20820	789624	4	63,99,126,99,	0,2755,11520,19612,
#Deleted in new
chr2_GL383522v1_alt	1109	34610	chr2_GL383522v1_alt:1109-34610	0	+	1109	34610	789624	11	63,99,126,99,126,109,89,126,115,90,137,	0,2755,11520,19612,19807,23880,25221,28043,29327,30492,33364,
#Deleted in new
chr2_GL383522v1_alt	3769	75920	chr2_GL383522v1_alt:3769-75920	0	-	3769	3769	8553170	5	91,99,105,147,68,	0,56442,58929,60095,72083,
#Deleted in new
chr2_GL383522v1_alt	12689	25294	chr2_GL383522v1_alt:12689-25294	0	+	12689	12689	8553170	4	66,99,126,305,	0,8032,8227,12300,
#Deleted in new
chr2_GL383522v1_alt	25059	29174	chr2_GL383522v1_alt:25059-29174	2	+	25059	25548	789624	4	39,325,89,22,	0,466,1271,4093,
#Deleted in new
chr2_GL383522v1_alt	25325	34694	chr2_GL383522v1_alt:25325-34694	0	+	25325	25325	8553170	5	1094,126,115,90,221,	0,3827,5111,6276,9148,
#Deleted in new
chr2_GL383522v1_alt	28749	30480	chr2_GL383522v1_alt:28749-30480	0	+	28749	28749	8553170	2	529,44,	0,1687,
#Deleted in new
chr2_GL383522v1_alt	57522	77061	chr2_GL383522v1_alt:57522-77061	3	-	58060	76146	0	7	663,99,105,147,66,147,117,	0,2689,5176,6342,18330,18491,19422,
#Deleted in new
chr2_GL383522v1_alt	58060	76146	chr2_GL383522v1_alt:58060-76146	1	-	58060	76146	0	6	125,99,105,147,66,133,	0,2151,4638,5804,17792,17953,
#Deleted in new
chr2_GL383522v1_alt	63864	99904	chr2_GL383522v1_alt:63864-99904	0	-	63864	76146	789624	5	147,66,147,158,78,	0,11988,12149,13291,35962,
#Deleted in new
chr2_GL383522v1_alt	63864	99998	chr2_GL383522v1_alt:63864-99998	0	-	63864	63864	8553170	6	147,60,66,147,158,176,	0,7610,11988,12149,13291,35958,
#Deleted in new
chr2_GL383522v1_alt	87866	94760	chr2_GL383522v1_alt:87866-94760	3	+	87958	94706	789624	5	310,110,112,116,566,	0,1205,3265,5424,6328,
#Deleted in new
chr2_GL383522v1_alt	87917	94358	chr2_GL383522v1_alt:87917-94358	1	+	87958	94219	789624	4	259,110,112,164,	0,1154,3214,6277,
#Deleted in new
chr2_GL383522v1_alt	87919	96622	chr2_GL383522v1_alt:87919-96622	0	+	87958	91222	789624	4	257,112,116,2428,	0,3212,5371,6275,
#Deleted in new
chr2_GL383522v1_alt	87951	94463	chr2_GL383522v1_alt:87951-94463	1	+	87958	94219	789624	2	225,269,	0,6243,
#Deleted in new
chr2_GL383522v1_alt	89575	95322	chr2_GL383522v1_alt:89575-95322	0	+	89575	89575	8553170	3	44,112,1128,	0,1556,4619,
#Deleted in new
chr2_GL383522v1_alt	109564	123060	chr2_GL383522v1_alt:109564-123060	3	-	110248	123060	789624	7	885,147,207,198,157,242,204,	0,1719,4218,7727,9439,12246,13292,
#Deleted in new
chr2_GL383522v1_alt	110009	123060	chr2_GL383522v1_alt:110009-123060	0	-	110009	110009	8553170	7	440,147,135,198,157,242,204,	0,1274,3773,7282,8994,11801,12847,
#Deleted in new
chr2_GL582966v2_alt	3215	96131	chr2_GL582966v2_alt:3215-96131	3	+	3215	83688	789624	23	105,49,56,88,125,105,149,149,176,69,207,147,189,118,77,110,102,61,72,105,217,114,1042,	0,4325,4650,5388,9614,12553,13028,30771,42132,47718,50151,52416,59806,63217,66060,67196,69219,69518,74189,76759,78931,80366,91874,
#Deleted in new
chr2_GL582966v2_alt	13226	34095	chr2_GL582966v2_alt:13226-34095	0	+	13226	13226	8553170	4	142,105,149,109,	0,2542,3017,20760,
#Deleted in new
chr2_GL582966v2_alt	13829	95522	chr2_GL582966v2_alt:13829-95522	0	+	13829	13829	789624	20	61,105,149,149,176,69,207,147,189,118,77,110,102,61,72,105,217,114,207,433,	0,1939,2414,20157,31518,37104,39537,41802,49192,52603,55446,56582,58605,58904,63575,66145,68317,69752,78358,81260,
#Deleted in new
chr2_GL582966v2_alt	50941	70848	chr2_GL582966v2_alt:50941-70848	0	+	50941	50941	8553170	6	61,207,147,189,118,1573,	0,2425,4690,12080,15491,18334,
#Deleted in new
chr2_GL582966v2_alt	71946	96131	chr2_GL582966v2_alt:71946-96131	0	+	71946	71946	8553170	7	590,61,72,105,217,114,1042,	0,787,5458,8028,10200,11635,23143,
#Deleted in new
chr2_KI270767v1_alt	9377	15971	chr2_KI270767v1_alt:9377-15971	3	+	9377	9377	789624	6	599,119,91,57,105,1199,	0,692,1002,1430,1769,5395,
#Deleted in new
chr2_KI270767v1_alt	10732	13224	chr2_KI270767v1_alt:10732-13224	0	+	10732	10732	8553170	2	519,80,	0,2412,
#Deleted in new
chr2_KI270767v1_alt	42385	44708	chr2_KI270767v1_alt:42385-44708	3	+	42385	42385	8553170	1	2323,	0,
#Deleted in new
chr2_KI270767v1_alt	69252	70224	chr2_KI270767v1_alt:69252-70224	3	-	69252	69252	8553170	2	403,140,	0,832,
#Deleted in new
chr2_KI270767v1_alt	91753	128208	chr2_KI270767v1_alt:91753-128208	3	-	91753	91753	789624	4	80,226,223,43,	0,374,12613,36412,
#Deleted in new
chr2_KI270767v1_alt	138963	160302	chr2_KI270767v1_alt:138963-160302	7	+	138963	138963	16724991	3	134,103,50,	0,19745,21289,
#Deleted in new
chr2_KI270768v1_alt	25381	54549	chr2_KI270768v1_alt:25381-54549	5	+	25381	25381	16724991	6	231,139,120,147,198,134,	0,5654,11415,14122,28215,29034,
#Deleted in new
chr2_KI270768v1_alt	25454	71290	chr2_KI270768v1_alt:25454-71290	7	+	25454	25454	16724991	4	158,198,77,786,	0,28142,29018,45050,
#Deleted in new
chr2_KI270768v1_alt	26216	27243	chr2_KI270768v1_alt:26216-27243	7	-	26216	26216	16724991	1	1027,	0,
#Deleted in new
chr2_KI270768v1_alt	36619	54594	chr2_KI270768v1_alt:36619-54594	4	+	36619	36619	16724991	3	297,198,122,	0,16977,17853,
#Deleted in new
chr2_KI270768v1_alt	39515	53727	chr2_KI270768v1_alt:39515-53727	4	+	39515	39515	16724991	2	135,131,	0,14081,
#Deleted in new
chr2_KI270768v1_alt	60994	70993	chr2_KI270768v1_alt:60994-70993	4	+	60994	60994	16724991	2	507,489,	0,9510,
#Deleted in new
chr2_KI270768v1_alt	98953	105653	chr2_KI270768v1_alt:98953-105653	3	-	98953	98953	8553170	3	787,259,280,	0,5930,6420,
#Deleted in new
chr2_KI270769v1_alt	9879	89039	chr2_KI270769v1_alt:9879-89039	0	+	9879	88931	789624	10	117,114,139,113,73,74,99,101,88,351,	0,22061,24709,43368,57211,59853,65187,77285,78436,78809,
#Deleted in new
chr2_KI270769v1_alt	9879	94556	chr2_KI270769v1_alt:9879-94556	0	+	9879	94348	789624	10	117,114,139,113,73,92,99,101,88,367,	0,22061,24709,43368,57211,59835,65187,77285,78436,84310,
#Deleted in new
chr2_KI270769v1_alt	9879	41430	chr2_KI270769v1_alt:9879-41430	0	+	9879	9879	8553170	4	117,114,139,59,	0,22061,24709,31492,
#Deleted in new
chr2_KI270769v1_alt	9897	89041	chr2_KI270769v1_alt:9897-89041	3	+	9900	88931	789624	10	99,114,139,113,73,74,99,101,88,353,	0,22043,24691,43350,57193,59835,65169,77267,78418,78791,
#Deleted in new
chr2_KI270769v1_alt	35378	35988	chr2_KI270769v1_alt:35378-35988	3	+	35378	35378	8553170	1	610,	0,
#Deleted in new
chr2_KI270769v1_alt	64081	89034	chr2_KI270769v1_alt:64081-89034	0	+	64081	64081	8553170	7	2618,73,74,99,101,88,346,	0,3009,5651,10985,23083,24234,24607,
#Deleted in new
chr2_KI270769v1_alt	87597	89005	chr2_KI270769v1_alt:87597-89005	0	+	87597	87597	8553170	3	152,88,317,	0,718,1091,
#Deleted in new
chr2_KI270769v1_alt	93995	94564	chr2_KI270769v1_alt:93995-94564	0	+	93995	93995	8553170	1	569,	0,
#Deleted in new
chr2_KI270769v1_alt	106422	106898	chr2_KI270769v1_alt:106422-106898	3	+	106422	106422	8553170	1	476,	0,
#Deleted in new
chr2_KI270769v1_alt	106830	110463	chr2_KI270769v1_alt:106830-110463	3	-	108432	110463	789624	2	1722,180,	0,3453,
#Deleted in new
chr2_KI270770v1_alt	17083	25780	chr2_KI270770v1_alt:17083-25780	0	+	17083	17083	8553170	2	133,123,	0,8574,
#Deleted in new
chr2_KI270770v1_alt	17095	17871	chr2_KI270770v1_alt:17095-17871	1	+	17095	17095	8553170	2	271,166,	0,610,
#Deleted in new
chr2_KI270770v1_alt	17594	22870	chr2_KI270770v1_alt:17594-22870	3	+	17594	17594	8553170	2	425,110,	0,5166,
#Deleted in new
chr2_KI270770v1_alt	24751	25347	chr2_KI270770v1_alt:24751-25347	3	+	24751	24751	8553170	1	596,	0,
#Deleted in new
chr2_KI270770v1_alt	55779	130155	chr2_KI270770v1_alt:55779-130155	3	-	55779	55779	789624	3	752,221,237,	0,26189,74139,
#Deleted in new
chr2_KI270772v1_alt	34800	36761	chr2_KI270772v1_alt:34800-36761	3	-	34800	34800	8553170	1	1961,	0,
#Deleted in new
chr2_KI270772v1_alt	42646	42870	chr2_KI270772v1_alt:42646-42870	7	+	42646	42646	16724991	1	224,	0,
#Deleted in new
chr2_KI270772v1_alt	86686	87157	chr2_KI270772v1_alt:86686-87157	7	+	86686	86686	16724991	2	49,298,	0,173,
#Deleted in new
chr2_KI270772v1_alt	93189	93293	chr2_KI270772v1_alt:93189-93293	7	-	93189	93189	16724991	1	104,	0,
#Deleted in new
chr2_KI270773v1_alt	4167	64734	chr2_KI270773v1_alt:4167-64734	3	+	4167	64734	789624	6	128,130,39,117,72,207,	0,30883,32733,40322,52365,60360,
#Deleted in new
chr2_KI270774v1_alt	1088	50794	chr2_KI270774v1_alt:1088-50794	0	+	1088	50655	789624	2	111,271,	0,49435,
#Deleted in new
chr2_KI270774v1_alt	1088	50794	chr2_KI270774v1_alt:1088-50794	3	+	1088	50655	789624	2	111,271,	0,49435,
#Deleted in new
chr2_KI270774v1_alt	1088	50629	chr2_KI270774v1_alt:1088-50629	0	+	1088	1088	8553170	2	111,106,	0,49435,
#Deleted in new
chr2_KI270774v1_alt	25661	29587	chr2_KI270774v1_alt:25661-29587	3	-	25661	25661	8553170	2	656,194,	0,3732,
#Deleted in new
chr2_KI270774v1_alt	36705	50794	chr2_KI270774v1_alt:36705-50794	0	+	36705	36705	8553170	2	177,271,	0,13818,
#Deleted in new
chr2_KI270776v1_alt	11160	16264	chr2_KI270776v1_alt:11160-16264	3	+	11160	16264	789624	3	92,256,822,	0,2718,4282,
#Deleted in new
chr2_KI270776v1_alt	11162	16306	chr2_KI270776v1_alt:11162-16306	0	+	11162	16264	789624	3	90,256,864,	0,2716,4280,
#Deleted in new
chr2_KI270776v1_alt	13013	14005	chr2_KI270776v1_alt:13013-14005	3	-	13013	13013	8553170	2	473,266,	0,726,
#Deleted in new
chr2_KI270776v1_alt	20409	22735	chr2_KI270776v1_alt:20409-22735	3	-	20409	20409	8553170	2	1057,171,	0,2155,
#Deleted in new
chr2_KI270776v1_alt	20922	29511	chr2_KI270776v1_alt:20922-29511	3	+	26582	29146	789624	4	450,204,256,1363,	0,5657,6067,7226,
#Deleted in new
chr2_KI270776v1_alt	21162	28591	chr2_KI270776v1_alt:21162-28591	0	+	26582	28591	789624	3	210,207,443,	0,5414,6986,
#Deleted in new
chr2_KI270776v1_alt	21207	22721	chr2_KI270776v1_alt:21207-22721	1	-	21207	21207	8553170	3	259,48,24,	0,1357,1490,
#Deleted in new
chr2_KI270776v1_alt	21284	29504	chr2_KI270776v1_alt:21284-29504	1	+	26582	29146	789624	4	88,207,256,1356,	0,5292,5705,6864,
#Deleted in new
chr2_KI270776v1_alt	21290	27030	chr2_KI270776v1_alt:21290-27030	0	+	21290	21290	8553170	2	82,454,	0,5286,
#Deleted in new
chr2_KI270776v1_alt	21290	29506	chr2_KI270776v1_alt:21290-29506	0	+	26582	27658	789624	5	82,204,256,714,1025,	0,5289,5699,6348,7191,
#Deleted in new
chr2_KI270776v1_alt	21290	29507	chr2_KI270776v1_alt:21290-29507	0	+	21290	21290	8553170	2	82,2931,	0,5286,
#Deleted in new
chr2_KI270776v1_alt	21332	28257	chr2_KI270776v1_alt:21332-28257	0	+	26582	28257	789624	5	40,144,204,256,109,	0,547,5247,5657,6816,
#Deleted in new
chr2_KI270776v1_alt	21795	24114	chr2_KI270776v1_alt:21795-24114	1	-	21795	21795	8553170	3	109,771,313,	0,749,2006,
#Deleted in new
chr2_KI270776v1_alt	23029	29510	chr2_KI270776v1_alt:23029-29510	1	+	23526	29146	789624	4	530,204,256,1362,	0,3550,3960,5119,
#Deleted in new
chr2_KI270776v1_alt	23032	29506	chr2_KI270776v1_alt:23032-29506	1	+	26582	29146	789624	5	527,181,204,256,1358,	0,2398,3547,3957,5116,
#Deleted in new
chr2_KI270776v1_alt	23097	29511	chr2_KI270776v1_alt:23097-29511	1	+	23526	29146	789624	4	462,207,256,1363,	0,3479,3892,5051,
#Deleted in new
chr2_KI270776v1_alt	23487	26621	chr2_KI270776v1_alt:23487-26621	0	+	25653	26621	789624	3	72,337,42,	0,1943,3092,
#Deleted in new
chr2_KI270776v1_alt	23493	28554	chr2_KI270776v1_alt:23493-28554	0	+	23526	28554	789624	3	66,204,406,	0,3086,4655,
#Deleted in new
chr2_KI270776v1_alt	23493	27019	chr2_KI270776v1_alt:23493-27019	0	+	26582	27019	789624	4	66,181,207,30,	0,1937,3083,3496,
#Deleted in new
chr2_KI270776v1_alt	23494	28472	chr2_KI270776v1_alt:23494-28472	0	+	26582	28472	789624	4	58,207,256,324,	0,3082,3495,4654,
#Deleted in new
chr2_KI270776v1_alt	23506	25868	chr2_KI270776v1_alt:23506-25868	0	+	23506	23506	8553170	2	53,438,	0,1924,
#Deleted in new
chr2_KI270776v1_alt	23522	27080	chr2_KI270776v1_alt:23522-27080	0	+	23522	23522	8553170	2	37,504,	0,3054,
#Deleted in new
chr2_KI270776v1_alt	26114	27098	chr2_KI270776v1_alt:26114-27098	0	+	26186	27098	789624	3	192,204,109,	0,465,875,
#Deleted in new
chr2_KI270776v1_alt	56477	57134	chr2_KI270776v1_alt:56477-57134	3	+	56477	56477	8553170	2	99,472,	0,185,
#Deleted in new
chr2_KI270776v1_alt	61978	71006	chr2_KI270776v1_alt:61978-71006	3	-	63155	70936	0	5	1417,35,156,360,146,	0,2068,2317,2740,8882,
#Deleted in new
chr2_KI270776v1_alt	62794	70963	chr2_KI270776v1_alt:62794-70963	0	-	64450	70936	789624	5	601,35,156,124,103,	0,1252,1501,2160,8066,
#Deleted in new
chr2_KI270776v1_alt	63330	64984	chr2_KI270776v1_alt:63330-64984	0	-	63330	64984	789624	3	65,35,266,	0,716,1388,
#Deleted in new
chr2_KI270776v1_alt	81697	85917	chr2_KI270776v1_alt:81697-85917	0	+	81854	83098	789624	3	315,181,2106,	0,1391,2114,
#Deleted in new
chr2_KI270776v1_alt	81826	85921	chr2_KI270776v1_alt:81826-85921	3	+	81854	85372	789624	2	186,2110,	0,1985,
#Deleted in new
chr2_KI270776v1_alt	93460	147081	chr2_KI270776v1_alt:93460-147081	1	+	93460	93460	8553170	3	116,76,137,	0,1197,53484,
#Deleted in new
chr2_KI270776v1_alt	93464	94733	chr2_KI270776v1_alt:93464-94733	0	+	93464	93464	789624	2	108,76,	0,1193,
#Deleted in new
chr2_KI270776v1_alt	94045	171794	chr2_KI270776v1_alt:94045-171794	3	+	94045	94045	8553170	4	182,76,137,75,	0,612,52899,77674,
#Deleted in new
chr2_KI270776v1_alt	106086	111236	chr2_KI270776v1_alt:106086-111236	3	-	106086	106086	789624	3	351,149,24,	0,3197,5126,
#Deleted in new
chr2_KI270776v1_alt	106134	114649	chr2_KI270776v1_alt:106134-114649	0	-	106134	106134	789624	3	303,149,55,	0,3149,8460,
#Deleted in new
chr2_KI270776v1_alt	106238	112546	chr2_KI270776v1_alt:106238-112546	0	-	106238	106238	789624	3	199,149,91,	0,3045,6217,
#Deleted in new
chr2_KI270776v1_alt	146706	147081	chr2_KI270776v1_alt:146706-147081	1	+	146706	146706	8553170	1	375,	0,
#Deleted in new
chr2_KI270893v1_alt	9377	15971	chr2_KI270893v1_alt:9377-15971	3	+	9377	9377	789624	6	599,119,91,57,105,1199,	0,692,1002,1430,1769,5395,
#Deleted in new
chr2_KI270893v1_alt	10732	13224	chr2_KI270893v1_alt:10732-13224	0	+	10732	10732	8553170	2	519,80,	0,2412,
#Deleted in new
chr2_KI270893v1_alt	42385	44708	chr2_KI270893v1_alt:42385-44708	3	+	42385	42385	8553170	1	2323,	0,
#Deleted in new
chr2_KI270893v1_alt	68893	69865	chr2_KI270893v1_alt:68893-69865	3	-	68893	68893	8553170	2	403,140,	0,832,
#Deleted in new
chr2_KI270893v1_alt	91393	127848	chr2_KI270893v1_alt:91393-127848	3	-	91393	91393	789624	4	80,226,223,43,	0,374,12613,36412,
#Deleted in new
chr2_KI270893v1_alt	138603	159942	chr2_KI270893v1_alt:138603-159942	7	+	138603	138603	16724991	3	134,103,50,	0,19745,21289,
#Deleted in new
chr2_KI270894v1_alt	2390	3048	chr2_KI270894v1_alt:2390-3048	3	+	2571	3048	789624	2	236,298,	0,360,
#Deleted in new
chr2_KI270894v1_alt	27407	27884	chr2_KI270894v1_alt:27407-27884	3	+	27407	27884	789624	2	55,298,	0,179,
#Deleted in new
chr2_KI270894v1_alt	41172	41731	chr2_KI270894v1_alt:41172-41731	3	+	41197	41731	789624	2	83,301,	0,258,
#Deleted in new
chr2_KI270894v1_alt	122107	122211	chr2_KI270894v1_alt:122107-122211	7	+	122107	122107	16724991	1	104,	0,
#Deleted in new
chr2_KI270894v1_alt	128235	128706	chr2_KI270894v1_alt:128235-128706	7	-	128235	128235	16724991	2	298,49,	0,422,
#Deleted in new
chr2_KI270894v1_alt	171455	171679	chr2_KI270894v1_alt:171455-171679	7	-	171455	171455	16724991	1	224,	0,
#Deleted in new
chr2_KI270894v1_alt	177383	179346	chr2_KI270894v1_alt:177383-179346	3	+	177383	177383	8553170	1	1963,	0,
#Deleted in new
chr2_KN538362v1_fix	38052	38635	chr2_KN538362v1_fix:38052-38635	3	+	38052	38052	8553170	1	583,	0,
#Deleted in new
chr2_KN538362v1_fix	65956	105980	chr2_KN538362v1_fix:65956-105980	3	+	65956	65956	789624	3	73,122,3043,	0,17444,36981,
#Deleted in new
chr2_KN538363v1_fix	5304	153241	chr2_KN538363v1_fix:5304-153241	1	+	5816	152046	0	27	646,64,151,172,141,88,81,72,124,107,103,197,118,97,139,109,89,82,90,114,83,88,150,97,282,592,1198,	0,19368,62140,65781,70541,79875,86195,86400,87504,98346,101757,103740,104340,109338,110059,110529,111097,117298,122443,124441,125876,129883,133845,135432,138128,144159,146739,
#Deleted in new
chr2_KN538363v1_fix	5703	86946	chr2_KN538363v1_fix:5703-86946	0	+	5703	5703	8553170	6	247,64,151,175,141,1767,	0,18969,61741,65379,70142,79476,
#Deleted in new
chr2_KN538363v1_fix	5735	153240	chr2_KN538363v1_fix:5735-153240	1	+	5816	152046	0	27	215,64,151,175,141,88,81,72,124,107,103,197,118,97,139,109,89,82,90,114,83,88,150,97,282,592,1197,	0,18937,61709,65347,70110,79444,85764,85969,87073,97915,101326,103309,103909,108907,109628,110098,110666,116867,122012,124010,125445,129452,133414,135001,137697,143728,146308,
#Deleted in new
chr2_KN538363v1_fix	21599	71143	chr2_KN538363v1_fix:21599-71143	0	+	21599	21599	8553170	4	158,64,151,58,	0,3073,45845,49486,
#Deleted in new
chr2_KN538363v1_fix	65939	75986	chr2_KN538363v1_fix:65939-75986	2	+	65939	65939	8553170	4	104,151,172,141,	0,1505,5146,9906,
#Deleted in new
chr2_KN538363v1_fix	67553	76197	chr2_KN538363v1_fix:67553-76197	0	+	67553	67553	8553170	3	42,175,352,	0,3529,8292,
#Deleted in new
chr2_KN538363v1_fix	107061	153241	chr2_KN538363v1_fix:107061-153241	0	+	107061	152046	789624	17	103,197,118,97,139,109,89,82,90,114,83,88,150,97,282,592,1198,	0,1983,2583,7581,8302,8772,9340,15541,20686,22684,24119,28126,32088,33675,36371,42402,44982,
#Deleted in new
chr2_KN538363v1_fix	107126	114667	chr2_KN538363v1_fix:107126-114667	0	+	107126	107126	8553170	4	38,220,118,25,	0,1918,2518,7516,
#Deleted in new
chr2_KN538363v1_fix	109638	115914	chr2_KN538363v1_fix:109638-115914	0	+	109638	109638	8553170	5	124,86,97,139,81,	0,4519,5004,5725,6195,
#Deleted in new
chr2_KN538363v1_fix	114897	127820	chr2_KN538363v1_fix:114897-127820	0	+	114897	114897	8553170	5	605,109,89,82,73,	0,936,1504,7705,12850,
#Deleted in new
chr2_KN538363v1_fix	115358	116587	chr2_KN538363v1_fix:115358-116587	0	+	115358	115358	8553170	3	144,109,186,	0,475,1043,
#Deleted in new
chr2_KN538363v1_fix	115711	129821	chr2_KN538363v1_fix:115711-129821	0	+	115711	115711	8553170	5	231,89,82,90,76,	0,690,6891,12036,14034,
#Deleted in new
chr2_KN538363v1_fix	140774	152290	chr2_KN538363v1_fix:140774-152290	0	+	140774	152095	789624	3	59,282,247,	0,2658,11269,
#Deleted in new
chr2_KN538363v1_fix	149979	150990	chr2_KN538363v1_fix:149979-150990	0	+	149979	150109	789624	2	473,55,	0,956,
#Deleted in new
chr2_KN538363v1_fix	150536	150817	chr2_KN538363v1_fix:150536-150817	3	+	150536	150536	8553170	1	281,	0,
#Deleted in new
chr2_KN538363v1_fix	155388	210258	chr2_KN538363v1_fix:155388-210258	0	+	208510	210258	789624	6	29,257,94,106,74,29,	0,276,46051,53079,53941,54841,
#Deleted in new
chr2_KN538363v1_fix	196908	241012	chr2_KN538363v1_fix:196908-241012	3	+	197165	239688	0	18	372,94,106,74,252,66,87,57,103,106,71,72,121,106,150,48,102,1418,	0,4531,11559,12421,13321,18431,21395,22150,23105,25997,29534,31111,38283,38677,40557,40816,41685,42686,
#Deleted in new
chr2_KN538363v1_fix	196908	241011	chr2_KN538363v1_fix:196908-241011	1	+	197165	239688	0	14	372,94,66,87,103,106,71,72,121,106,150,48,102,1417,	0,4531,18431,21395,23105,25997,29534,31111,38283,38677,40557,40816,41685,42686,
#Deleted in new
chr2_KN538363v1_fix	197007	220076	chr2_KN538363v1_fix:197007-220076	0	+	197165	220076	789624	7	273,94,66,87,57,51,63,	0,4432,18332,21296,22051,22321,23006,
#Deleted in new
chr2_KN538363v1_fix	197009	241012	chr2_KN538363v1_fix:197009-241012	1	+	197165	239688	0	15	271,94,66,87,57,103,43,29,72,121,106,150,48,102,1418,	0,4430,18330,21294,22049,23004,25896,29475,31010,38182,38576,40456,40715,41584,42585,
#Deleted in new
chr2_KN538363v1_fix	197010	241012	chr2_KN538363v1_fix:197010-241012	0	+	197165	201443	789624	18	268,94,106,74,252,66,87,57,103,106,71,72,121,106,150,48,102,1418,	0,4429,11457,12319,13219,18329,21293,22048,23003,25895,29432,31009,38181,38575,40455,40714,41583,42584,
#Deleted in new
chr2_KN538363v1_fix	197013	222932	chr2_KN538363v1_fix:197013-222932	0	+	197165	222932	789624	6	267,94,66,87,103,27,	0,4426,18326,21290,23000,25892,
#Deleted in new
chr2_KN538363v1_fix	197019	241004	chr2_KN538363v1_fix:197019-241004	0	+	197019	197019	8553170	17	261,94,106,74,252,66,87,57,103,106,71,72,500,150,48,102,1410,	0,4420,11448,12310,13210,18320,21284,22039,22994,25886,29423,31000,38172,40446,40705,41574,42575,
#Deleted in new
chr2_KN538363v1_fix	197022	209439	chr2_KN538363v1_fix:197022-209439	0	+	197022	197022	8553170	4	258,94,106,110,	0,4417,11445,12307,
#Deleted in new
chr2_KN538363v1_fix	197038	241004	chr2_KN538363v1_fix:197038-241004	0	+	197038	197038	8553170	16	242,94,106,74,252,66,812,103,106,71,72,500,150,48,102,1410,	0,4401,11429,12291,13191,18301,21265,22975,25867,29404,30981,38153,40427,40686,41555,42556,
#Deleted in new
chr2_KN538363v1_fix	197042	219077	chr2_KN538363v1_fix:197042-219077	0	+	197165	219077	789624	7	238,94,106,74,66,87,19,	0,4397,11425,12287,18297,21261,22016,
#Deleted in new
chr2_KN538363v1_fix	197043	241012	chr2_KN538363v1_fix:197043-241012	1	+	197165	239688	0	17	237,94,106,74,252,66,87,103,106,71,72,121,106,150,48,102,1418,	0,4396,11424,12286,13186,18296,21260,22970,25862,29399,30976,38148,38542,40422,40681,41550,42551,
#Deleted in new
chr2_KN538363v1_fix	197051	241012	chr2_KN538363v1_fix:197051-241012	1	+	197165	239688	789624	19	229,94,106,74,252,66,87,57,51,103,106,71,72,121,106,150,48,102,1418,	0,4388,11416,12278,13178,18288,21252,22007,22277,22962,25854,29391,30968,38140,38534,40414,40673,41542,42543,
#Deleted in new
chr2_KN538363v1_fix	211292	235221	chr2_KN538363v1_fix:211292-235221	0	+	211292	211292	8553170	8	205,66,87,103,106,71,72,30,	0,4047,7011,8721,11613,15150,16727,23899,
#Deleted in new
chr2_KN538363v1_fix	219641	226452	chr2_KN538363v1_fix:219641-226452	0	+	219641	219641	8553170	3	475,106,10,	0,3264,6801,
#Deleted in new
chr2_KN538363v1_fix	220716	235686	chr2_KN538363v1_fix:220716-235686	0	+	220716	220716	8553170	6	89,106,71,72,121,101,	0,2189,5726,7303,14475,14869,
#Deleted in new
chr2_KN538363v1_fix	221064	221340	chr2_KN538363v1_fix:221064-221340	3	+	221064	221064	789624	1	276,	0,
#Deleted in new
chr2_KN538363v1_fix	222485	228333	chr2_KN538363v1_fix:222485-228333	0	+	222485	222485	8553170	3	526,71,314,	0,3957,5534,
#Deleted in new
chr2_KN538363v1_fix	234013	234278	chr2_KN538363v1_fix:234013-234278	3	+	234013	234013	789624	1	265,	0,
#Deleted in new
chr2_KN538363v1_fix	235444	239857	chr2_KN538363v1_fix:235444-239857	0	+	235444	235444	8553170	5	247,145,48,102,263,	0,2026,2280,3149,4150,
#Deleted in new
chr2_KN538363v1_fix	253153	292392	chr2_KN538363v1_fix:253153-292392	0	+	253153	253153	8553170	13	207,103,61,45,60,2457,3172,138,78,24,56,10,248,	0,1346,8259,10935,15130,19305,23824,27146,30860,32639,34455,38587,38991,
#Deleted in new
chr2_KN538363v1_fix	253153	272530	chr2_KN538363v1_fix:253153-272530	0	+	254527	272530	789624	7	207,152,61,45,194,60,72,	0,1297,8259,10935,12814,15130,19305,
#Deleted in new
chr2_KN538363v1_fix	253158	292393	chr2_KN538363v1_fix:253158-292393	3	+	254527	292250	789624	16	202,103,61,45,194,60,77,136,85,73,138,78,24,56,10,249,	0,1341,8254,10930,12809,15125,19300,20657,21672,23819,27141,30855,32634,34450,38582,38986,
#Deleted in new
chr2_KN538363v1_fix	253216	268307	chr2_KN538363v1_fix:253216-268307	0	+	253216	253216	8553170	5	144,61,45,194,24,	0,8196,10872,12751,15067,
#Deleted in new
chr2_KN538363v1_fix	253217	292392	chr2_KN538363v1_fix:253217-292392	0	+	253217	253217	8553170	16	143,103,61,45,194,60,1493,85,73,580,138,78,24,56,10,248,	0,1282,8195,10871,12750,15066,19241,21613,23760,26352,27082,30796,32575,34391,38523,38927,
#Deleted in new
chr2_KN538363v1_fix	253221	268342	chr2_KN538363v1_fix:253221-268342	0	+	253221	253221	8553170	2	139,59,	0,15062,
#Deleted in new
chr2_KN538363v1_fix	253222	264342	chr2_KN538363v1_fix:253222-264342	0	+	254527	264342	789624	4	138,103,61,254,	0,1277,8190,10866,
#Deleted in new
chr2_KN538363v1_fix	253269	292393	chr2_KN538363v1_fix:253269-292393	0	+	253269	253269	8553170	14	91,118,61,45,60,1493,85,73,138,78,24,56,10,249,	0,1230,8143,10819,15014,19189,21561,23708,27030,30744,32523,34339,38471,38875,
#Deleted in new
chr2_KN538363v1_fix	253311	272514	chr2_KN538363v1_fix:253311-272514	0	+	254527	264121	789624	6	49,152,45,194,60,56,	0,1139,10777,12656,14972,19147,
#Deleted in new
chr2_KN538363v1_fix	261427	273951	chr2_KN538363v1_fix:261427-273951	0	+	261427	261427	8553170	6	46,45,121,60,77,136,	0,2661,4613,6856,11031,12388,
#Deleted in new
chr2_KN538363v1_fix	264885	266062	chr2_KN538363v1_fix:264885-266062	0	+	264885	264885	8553170	2	476,95,	0,1082,
#Deleted in new
chr2_KN538363v1_fix	273286	291529	chr2_KN538363v1_fix:273286-291529	0	+	273286	273286	8553170	7	665,85,73,138,78,24,3921,	0,1544,3691,7013,10727,12506,14322,
#Deleted in new
chr2_KN538363v1_fix	276860	291750	chr2_KN538363v1_fix:276860-291750	0	+	276860	276860	8553170	6	190,138,78,24,56,10,	0,3439,7153,8932,10748,14880,
#Deleted in new
chr2_KN538363v1_fix	280053	285812	chr2_KN538363v1_fix:280053-285812	0	+	280053	280053	8553170	3	384,78,20,	0,3960,5739,
#Deleted in new
chr2_KN538363v1_fix	283863	292393	chr2_KN538363v1_fix:283863-292393	0	+	283863	283863	8553170	5	228,24,56,10,249,	0,1929,3745,7877,8281,
#Deleted in new
chr2_KN538363v1_fix	289025	292393	chr2_KN538363v1_fix:289025-292393	0	+	289025	289025	8553170	3	63,10,249,	0,2715,3119,
#Deleted in new
chr2_KN538363v1_fix	296469	298754	chr2_KN538363v1_fix:296469-298754	3	-	296469	296469	8553170	1	2285,	0,
#Deleted in new
chr2_KN538363v1_fix	325180	325293	chr2_KN538363v1_fix:325180-325293	3	-	325180	325180	8553170	1	113,	0,
#Deleted in new
chr2_KQ031384v1_fix	6057	6610	chr2_KQ031384v1_fix:6057-6610	3	+	6120	6610	789624	2	112,296,	0,257,
#Deleted in new
chr2_KQ031384v1_fix	23906	24204	chr2_KQ031384v1_fix:23906-24204	7	-	23906	23906	16724991	1	298,	0,
#Deleted in new
chr2_KQ031384v1_fix	31153	31579	chr2_KQ031384v1_fix:31153-31579	7	-	31153	31153	16724991	1	426,	0,
#Deleted in new
chr2_KQ031384v1_fix	40491	41206	chr2_KQ031384v1_fix:40491-41206	7	-	40491	40491	16724991	2	289,51,	0,664,
#Deleted in new
chr2_KQ031384v1_fix	56126	56783	chr2_KQ031384v1_fix:56126-56783	3	-	56126	56602	789624	2	296,236,	0,421,
#Deleted in new
chr2_KQ031384v1_fix	75087	75593	chr2_KQ031384v1_fix:75087-75593	3	-	75087	75564	789624	2	296,84,	0,422,
#Deleted in new
chr2_KQ031384v1_fix	87293	87907	chr2_KQ031384v1_fix:87293-87907	3	-	87293	87810	8553170	2	299,146,	0,468,
#Deleted in new
chr2_KQ031384v1_fix	101234	101757	chr2_KQ031384v1_fix:101234-101757	3	-	101234	101704	789624	2	296,102,	0,421,
#Deleted in new
chr2_KQ031384v1_fix	118807	119341	chr2_KQ031384v1_fix:118807-119341	3	-	118807	119283	789624	2	296,113,	0,421,
#Deleted in new
chr2_KQ031384v1_fix	128817	129512	chr2_KQ031384v1_fix:128817-129512	7	-	128817	128817	16724991	2	301,50,	0,645,
#Deleted in new
chr2_KQ031384v1_fix	135996	136557	chr2_KQ031384v1_fix:135996-136557	3	-	135996	136510	0	2	296,96,	0,465,
#Deleted in new
chr2_KQ031384v1_fix	149049	149571	chr2_KQ031384v1_fix:149049-149571	3	-	149049	149524	789624	2	296,102,	0,420,
#Deleted in new
chr2_KQ031384v1_fix	154820	155292	chr2_KQ031384v1_fix:154820-155292	7	-	154820	154820	16724991	2	292,55,	0,417,
#Deleted in new
chr2_KQ031384v1_fix	186835	187610	chr2_KQ031384v1_fix:186835-187610	7	-	186835	186835	16724991	2	301,46,	0,729,
#Deleted in new
chr2_KQ031384v1_fix	194002	194613	chr2_KQ031384v1_fix:194002-194613	3	-	194002	194516	789624	2	296,146,	0,465,
#Deleted in new
chr2_KQ031384v1_fix	208684	209187	chr2_KQ031384v1_fix:208684-209187	3	-	208684	209160	789624	2	296,82,	0,421,
#Deleted in new
chr2_KQ031384v1_fix	226167	226670	chr2_KQ031384v1_fix:226167-226670	3	-	226167	226643	789624	2	296,82,	0,421,
#Deleted in new
chr2_KQ031384v1_fix	237549	238309	chr2_KQ031384v1_fix:237549-238309	7	-	237549	237549	16724991	2	293,50,	0,710,
#Deleted in new
chr2_KQ031384v1_fix	243800	244083	chr2_KQ031384v1_fix:243800-244083	7	-	243800	243800	16724991	1	283,	0,
#Deleted in new
chr2_KQ031384v1_fix	251399	251986	chr2_KQ031384v1_fix:251399-251986	3	-	251399	251934	0	2	299,101,	0,486,
#Deleted in new
chr2_KQ031384v1_fix	268576	269192	chr2_KQ031384v1_fix:268576-269192	3	-	268576	269128	789624	2	296,110,	0,506,
#Deleted in new
chr2_KQ031384v1_fix	279600	280038	chr2_KQ031384v1_fix:279600-280038	7	-	279600	279600	16724991	2	270,56,	0,382,
#Deleted in new
chr2_KQ031384v1_fix	280847	281379	chr2_KQ031384v1_fix:280847-281379	7	-	280847	280847	16724991	2	112,211,	0,321,
#Deleted in new
chr2_KQ031384v1_fix	285153	285986	chr2_KQ031384v1_fix:285153-285986	3	-	285153	285956	789624	2	311,79,	0,754,
#Deleted in new
chr2_KQ031384v1_fix	301325	301578	chr2_KQ031384v1_fix:301325-301578	7	-	301325	301325	16724991	1	253,	0,
#Deleted in new
chr2_KQ031384v1_fix	304921	305655	chr2_KQ031384v1_fix:304921-305655	7	-	304921	304921	16724991	2	294,49,	0,685,
#Deleted in new
chr2_KQ031384v1_fix	312334	312732	chr2_KQ031384v1_fix:312334-312732	7	-	312334	312334	16724991	1	398,	0,
#Deleted in new
chr2_KQ031384v1_fix	322248	322754	chr2_KQ031384v1_fix:322248-322754	3	-	322248	322723	789624	2	296,86,	0,420,
#Deleted in new
chr2_KQ031384v1_fix	330523	331287	chr2_KQ031384v1_fix:330523-331287	3	-	330523	331257	789624	2	311,79,	0,685,
#Deleted in new
chr2_KQ031384v1_fix	342999	343738	chr2_KQ031384v1_fix:342999-343738	7	-	342999	342999	16724991	2	322,50,	0,689,
#Deleted in new
chr2_KQ031384v1_fix	353606	354422	chr2_KQ031384v1_fix:353606-354422	3	-	353606	354392	789624	2	311,79,	0,737,
#Deleted in new
chr2_KQ031384v1_fix	361036	361562	chr2_KQ031384v1_fix:361036-361562	7	-	361036	361036	16724991	2	283,46,	0,480,
#Deleted in new
chr2_KQ031384v1_fix	362396	362841	chr2_KQ031384v1_fix:362396-362841	7	-	362396	362396	16724991	2	262,49,	0,396,
#Deleted in new
chr2_KQ031384v1_fix	375319	377111	chr2_KQ031384v1_fix:375319-377111	3	-	375319	377111	8553170	2	33,291,	0,1501,
#Deleted in new
chr2_KQ031384v1_fix	376826	377332	chr2_KQ031384v1_fix:376826-377332	0	-	376826	377301	0	2	296,86,	0,420,
#Deleted in new
chr2_KQ031384v1_fix	384123	384613	chr2_KQ031384v1_fix:384123-384613	7	-	384123	384123	16724991	2	244,49,	0,441,
#Deleted in new
chr2_KQ031384v1_fix	395514	395799	chr2_KQ031384v1_fix:395514-395799	7	-	395514	395514	16724991	1	285,	0,
#Deleted in new
chr2_KQ031384v1_fix	404058	404281	chr2_KQ031384v1_fix:404058-404281	7	-	404058	404058	16724991	1	223,	0,
#Deleted in new
chr2_KQ031384v1_fix	406089	406611	chr2_KQ031384v1_fix:406089-406611	3	-	406089	406564	8553170	2	296,102,	0,420,
#Deleted in new
chr2_KQ031384v1_fix	418723	418970	chr2_KQ031384v1_fix:418723-418970	7	-	418723	418723	16724991	1	247,	0,
#Deleted in new
chr2_KQ031384v1_fix	428450	428972	chr2_KQ031384v1_fix:428450-428972	3	-	428450	428925	0	2	296,102,	0,420,
#Deleted in new
chr2_KQ031384v1_fix	438935	439247	chr2_KQ031384v1_fix:438935-439247	3	-	438935	439247	8553170	1	312,	0,
#Deleted in new
chr2_KQ031384v1_fix	438941	439255	chr2_KQ031384v1_fix:438941-439255	0	-	438941	439255	8553170	1	314,	0,
#Deleted in new
chr2_KQ983256v1_alt	9647	9976	chr2_KQ983256v1_alt:9647-9976	3	+	9647	9647	8553170	1	329,	0,
#Deleted in new
chr2_KQ983256v1_alt	58108	59163	chr2_KQ983256v1_alt:58108-59163	7	+	58108	58108	16724991	2	363,139,	0,916,
#Deleted in new
chr2_KQ983256v1_alt	98602	109876	chr2_KQ983256v1_alt:98602-109876	3	+	98602	98602	8553170	3	171,56,554,	0,6761,10720,
#Deleted in new
chr2_KQ983256v1_alt	102738	195200	chr2_KQ983256v1_alt:102738-195200	3	-	113385	172034	789624	11	11813,158,218,134,110,225,109,746,247,94,282,	0,13563,15856,23959,26015,34390,52783,62477,69078,69430,92180,
#Deleted in new
chr2_KQ983256v1_alt	116897	116992	chr2_KQ983256v1_alt:116897-116992	3	-	116897	116897	8553170	1	95,	0,
#Deleted in new
chr2_KQ983256v1_alt	118722	172262	chr2_KQ983256v1_alt:118722-172262	0	-	118722	165864	789624	8	90,134,110,225,109,746,156,94,	0,7975,10031,18406,36799,46493,53094,53446,
#Deleted in new
chr2_KQ983256v1_alt	134610	134715	chr2_KQ983256v1_alt:134610-134715	3	+	134610	134610	8553170	1	105,	0,
#Deleted in new
chr2_KQ983256v1_alt	149449	149863	chr2_KQ983256v1_alt:149449-149863	7	+	149449	149449	16724991	1	414,	0,
#Deleted in new
chr2_KQ983256v1_alt	171923	195321	chr2_KQ983256v1_alt:171923-195321	0	-	171923	172034	789624	4	140,94,116,403,	0,245,663,22995,
#Deleted in new
chr2_KQ983256v1_alt	193622	195582	chr2_KQ983256v1_alt:193622-195582	3	+	193622	193622	8553170	2	144,608,	0,1352,
#Deleted in new
chr2_KQ983256v1_alt	194539	195174	chr2_KQ983256v1_alt:194539-195174	1	+	194539	194539	8553170	2	282,200,	0,435,
#Deleted in new
chr2_KQ983256v1_alt	223834	268621	chr2_KQ983256v1_alt:223834-268621	1	-	233202	262696	0	19	9460,73,135,176,155,161,130,129,146,115,135,186,131,82,77,108,92,65,263,	0,11722,11893,12980,15271,18128,23668,27124,27869,29201,30075,32086,32714,32936,34203,35001,37602,38801,44524,
#Deleted in new
chr2_KQ983256v1_alt	224564	231341	chr2_KQ983256v1_alt:224564-231341	3	+	224564	224564	8553170	2	1204,207,	0,6570,
#Deleted in new
chr2_KQ983256v1_alt	225127	225518	chr2_KQ983256v1_alt:225127-225518	7	-	225127	225127	16724991	1	391,	0,
#Deleted in new
chr2_KQ983256v1_alt	232128	268212	chr2_KQ983256v1_alt:232128-268212	1	-	233202	268151	0	19	1166,73,135,176,155,161,130,129,146,115,135,186,131,82,77,108,92,65,99,	0,3428,3599,4686,6977,9834,15374,18830,19575,20907,21781,23792,24420,24642,25909,26707,29308,30507,35985,
#Deleted in new
chr2_KQ983256v1_alt	232836	268527	chr2_KQ983256v1_alt:232836-268527	1	-	233202	258925	0	18	458,73,135,176,155,161,130,129,146,115,135,186,131,82,77,108,65,169,	0,2720,2891,3978,6269,9126,14666,18122,18867,20199,21073,23084,23712,23934,25201,25999,29799,35522,
#Deleted in new
chr2_KQ983256v1_alt	232962	268443	chr2_KQ983256v1_alt:232962-268443	1	-	233202	256842	789624	15	332,73,135,176,155,161,130,129,146,115,135,186,131,82,85,	0,2594,2765,3852,6143,9000,14540,17996,18741,20073,20947,22958,23586,23808,35396,
#Deleted in new
chr2_KQ983256v1_alt	232973	268443	chr2_KQ983256v1_alt:232973-268443	1	-	233202	262696	0	18	321,73,135,176,155,161,130,129,146,115,135,186,131,82,77,92,65,85,	0,2583,2754,3841,6132,8989,14529,17985,18730,20062,20936,22947,23575,23797,25064,28463,29662,35385,
#Deleted in new
chr2_KQ983256v1_alt	233118	268212	chr2_KQ983256v1_alt:233118-268212	1	-	233202	262696	0	19	176,73,135,176,155,161,130,129,146,115,135,186,131,82,77,108,92,65,99,	0,2438,2609,3696,5987,8844,14384,17840,18585,19917,20791,22802,23430,23652,24919,25717,28318,29517,34995,
#Deleted in new
chr2_KQ983256v1_alt	233118	268443	chr2_KQ983256v1_alt:233118-268443	1	-	233202	262640	0	16	176,73,135,176,155,161,130,129,146,115,135,186,131,82,65,85,	0,2438,2609,3696,5987,8844,14384,17840,18585,19917,20791,22802,23430,23652,29517,35240,
#Deleted in new
chr2_KQ983256v1_alt	236577	241987	chr2_KQ983256v1_alt:236577-241987	0	-	236577	236577	8553170	3	413,155,25,	0,2528,5385,
#Deleted in new
chr2_KQ983256v1_alt	256663	268443	chr2_KQ983256v1_alt:256663-268443	0	-	258820	262696	789624	7	16,82,77,146,92,65,85,	0,107,1374,2134,4773,5972,11695,
#Deleted in new
chr2_KQ983256v1_alt	256799	268275	chr2_KQ983256v1_alt:256799-268275	2	-	256799	262696	789624	6	53,77,108,92,65,174,	0,1238,2036,4637,5836,11302,
#Deleted in new
chr2_KQ983256v1_alt	268602	271946	chr2_KQ983256v1_alt:268602-271946	3	+	268997	271901	0	7	100,101,123,127,67,126,200,	0,374,1003,1761,2453,2904,3144,
#Deleted in new
chr2_KQ983256v1_alt	268611	271945	chr2_KQ983256v1_alt:268611-271945	1	+	268997	271901	0	7	91,147,123,127,67,126,199,	0,319,994,1752,2444,2895,3135,
#Deleted in new
chr2_KQ983256v1_alt	268622	271946	chr2_KQ983256v1_alt:268622-271946	1	+	268997	271901	0	6	455,123,127,67,126,200,	0,983,1741,2433,2884,3124,
#Deleted in new
chr2_KQ983256v1_alt	268624	271095	chr2_KQ983256v1_alt:268624-271095	0	+	268997	271095	789624	5	78,147,123,127,40,	0,306,981,1739,2431,
#Deleted in new
chr2_KQ983256v1_alt	268632	270135	chr2_KQ983256v1_alt:268632-270135	0	+	268632	268632	8553170	3	70,101,530,	0,344,973,
#Deleted in new
chr2_KQ983256v1_alt	268653	271819	chr2_KQ983256v1_alt:268653-271819	0	+	268997	269908	789624	8	49,101,123,246,127,67,126,73,	0,323,952,1251,1710,2402,2853,3093,
#Deleted in new
chr2_KQ983256v1_alt	268655	270208	chr2_KQ983256v1_alt:268655-270208	0	+	268655	268655	8553170	2	422,603,	0,950,
#Deleted in new
chr2_KQ983256v1_alt	268944	270485	chr2_KQ983256v1_alt:268944-270485	0	+	268997	269908	789624	4	133,123,246,147,	0,661,960,1394,
#Deleted in new
chr2_KQ983256v1_alt	268951	271857	chr2_KQ983256v1_alt:268951-271857	0	+	268997	270377	789624	6	85,154,127,67,126,111,	0,623,1412,2104,2555,2795,
#Deleted in new
chr2_KQ983256v1_alt	268951	270472	chr2_KQ983256v1_alt:268951-270472	0	+	268997	269584	789624	3	126,154,109,	0,623,1412,
#Deleted in new
chr2_KQ983256v1_alt	269860	270042	chr2_KQ983256v1_alt:269860-270042	3	+	269860	269860	8553170	1	182,	0,
#Deleted in new
chr2_KQ983256v1_alt	270858	270947	chr2_KQ983256v1_alt:270858-270947	3	+	270858	270858	8553170	1	89,	0,
#Deleted in new
chr2_KQ983256v1_alt	270895	270975	chr2_KQ983256v1_alt:270895-270975	3	+	270895	270895	789624	1	80,	0,
#Deleted in new
chr2_KQ983256v1_alt	271245	271946	chr2_KQ983256v1_alt:271245-271946	0	+	271245	271245	8553170	2	387,200,	0,501,
#Deleted in new
chr2_KQ983256v1_alt	271245	271377	chr2_KQ983256v1_alt:271245-271377	3	+	271245	271245	789624	1	132,	0,
#Deleted in new
chr2_KQ983256v1_alt	280170	280548	chr2_KQ983256v1_alt:280170-280548	1	+	280170	280548	789624	1	378,	0,
#Deleted in new
chr2_KQ983256v1_alt	280170	280548	chr2_KQ983256v1_alt:280170-280548	3	+	280170	280548	789624	1	378,	0,
#Deleted in new
chr2_KQ983256v1_alt	284333	327042	chr2_KQ983256v1_alt:284333-327042	1	-	285197	286265	789624	3	1960,119,216,	0,37991,42493,
#Deleted in new
chr2_KQ983256v1_alt	284337	327065	chr2_KQ983256v1_alt:284337-327065	1	-	285197	286265	789624	4	1956,119,251,239,	0,37987,42043,42489,
#Deleted in new
chr2_KQ983256v1_alt	284337	322646	chr2_KQ983256v1_alt:284337-322646	1	-	285197	286265	789624	3	1956,119,81,	0,37987,38228,
#Deleted in new
chr2_KQ983256v1_alt	285197	326921	chr2_KQ983256v1_alt:285197-326921	1	-	285197	286265	789624	4	1096,115,251,95,	0,37127,41183,41629,
#Deleted in new
chr2_KQ983256v1_alt	285583	322389	chr2_KQ983256v1_alt:285583-322389	0	-	285583	286265	789624	3	710,55,65,	0,27328,36741,
#Deleted in new
chr2_KQ983256v1_alt	285730	322643	chr2_KQ983256v1_alt:285730-322643	0	-	285730	286265	789624	3	563,115,78,	0,36594,36835,
#Deleted in new
chr2_KQ983256v1_alt	285853	322456	chr2_KQ983256v1_alt:285853-322456	0	-	285853	286265	789624	2	440,132,	0,36471,
#Deleted in new
chr2_KQ983256v1_alt	286017	322762	chr2_KQ983256v1_alt:286017-322762	0	-	286017	286265	789624	3	276,119,197,	0,36307,36548,
#Deleted in new
chr2_KQ983256v1_alt	286044	327065	chr2_KQ983256v1_alt:286044-327065	2	-	286044	286265	789624	3	249,115,239,	0,36280,40782,
#Deleted in new
chr2_KQ983256v1_alt	286208	326918	chr2_KQ983256v1_alt:286208-326918	0	-	286208	286265	789624	4	85,119,251,92,	0,36116,40172,40618,
#Deleted in new
chr2_KQ983256v1_alt	312393	378964	chr2_KQ983256v1_alt:312393-378964	3	+	312393	312393	789624	6	302,146,117,93,185,1948,	0,41686,57110,57673,61075,64623,
#Deleted in new
chr2_KQ983256v1_alt	312560	378964	chr2_KQ983256v1_alt:312560-378964	0	+	312560	312560	8553170	6	135,146,117,93,185,1948,	0,41519,56943,57506,60908,64456,
#Deleted in new
chr2_KQ983256v1_alt	312595	377383	chr2_KQ983256v1_alt:312595-377383	0	+	312595	312595	8553170	5	100,117,93,185,367,	0,56908,57471,60873,64421,
#Deleted in new
chr2_KQ983256v1_alt	330333	330653	chr2_KQ983256v1_alt:330333-330653	3	+	330333	330333	8553170	1	320,	0,
#Deleted in new
chr2_KQ983256v1_alt	373047	377115	chr2_KQ983256v1_alt:373047-377115	0	+	373047	373047	8553170	2	606,99,	0,3969,
#Deleted in new
chr2_KQ983256v1_alt	373265	373556	chr2_KQ983256v1_alt:373265-373556	7	-	373265	373265	16724991	1	291,	0,
#Deleted in new
chr2_KQ983256v1_alt	373703	373852	chr2_KQ983256v1_alt:373703-373852	3	-	373703	373703	8553170	1	149,	0,
#Deleted in new
chr2_KQ983256v1_alt	388300	428076	chr2_KQ983256v1_alt:388300-428076	3	+	395487	425231	789624	5	284,53,109,128,9722,	0,4877,7138,22583,30054,
#Deleted in new
chr2_KQ983256v1_alt	388326	428065	chr2_KQ983256v1_alt:388326-428065	1	+	395487	425231	789624	6	258,53,44,109,128,9711,	0,4851,5861,7112,22557,30028,
#Deleted in new
chr2_KQ983256v1_alt	388519	418785	chr2_KQ983256v1_alt:388519-418785	0	+	395487	418785	8553170	6	65,53,44,109,128,431,	0,4658,5668,6919,22364,29835,
#Deleted in new
chr2_KQ983256v1_alt	388630	419496	chr2_KQ983256v1_alt:388630-419496	0	+	395487	410927	8553170	7	188,53,44,109,106,128,1142,	0,4547,5557,6808,17018,22253,29724,
#Deleted in new
chr2_KQ983256v1_alt	388647	420799	chr2_KQ983256v1_alt:388647-420799	1	+	395487	420686	8553170	7	171,53,44,109,128,2159,115,	0,4530,5540,6791,22236,29707,32037,
#Deleted in new
chr2_KQ983256v1_alt	388647	426938	chr2_KQ983256v1_alt:388647-426938	0	+	395487	410927	8553170	8	70,53,44,109,103,128,2159,6254,	0,4530,5540,6791,17004,22236,29707,32037,
#Deleted in new
chr2_KQ983256v1_alt	388647	422439	chr2_KQ983256v1_alt:388647-422439	0	+	395487	422439	8553170	6	70,53,44,109,128,4085,	0,4530,5540,6791,22236,29707,
#Deleted in new
chr2_KQ983256v1_alt	388681	427891	chr2_KQ983256v1_alt:388681-427891	1	+	395487	420686	8553170	6	137,53,109,41,2159,7207,	0,4496,6757,22289,29673,32003,
#Deleted in new
chr2_KQ983256v1_alt	389351	420682	chr2_KQ983256v1_alt:389351-420682	0	+	395487	420682	8553170	6	278,53,44,109,128,2328,	0,3826,4836,6087,21532,29003,
#Deleted in new
chr2_KQ983256v1_alt	393197	426834	chr2_KQ983256v1_alt:393197-426834	0	+	395487	410927	8553170	6	33,44,109,106,128,8480,	0,990,2241,12451,17686,25157,
#Deleted in new
chr2_KQ983256v1_alt	405700	428062	chr2_KQ983256v1_alt:405700-428062	1	+	405700	425231	789624	3	54,128,9708,	0,5183,12654,
#Deleted in new
chr2_KQ983256v1_alt	469376	469754	chr2_KQ983256v1_alt:469376-469754	1	+	469376	469754	789624	1	378,	0,
#Deleted in new
chr2_KQ983256v1_alt	469376	469754	chr2_KQ983256v1_alt:469376-469754	3	+	469376	469754	789624	1	378,	0,
#Deleted in new
chr2_KQ983256v1_alt	513842	514214	chr2_KQ983256v1_alt:513842-514214	1	+	513842	514214	789624	1	372,	0,
#Deleted in new
chr2_KQ983256v1_alt	513842	514214	chr2_KQ983256v1_alt:513842-514214	3	+	513842	514214	789624	1	372,	0,
#Deleted in new
chr2_KQ983256v1_alt	523724	524547	chr2_KQ983256v1_alt:523724-524547	7	-	523724	523724	16724991	1	823,	0,
#Deleted in new
chr2_KQ983256v1_alt	532929	533876	chr2_KQ983256v1_alt:532929-533876	7	-	532929	532929	16724991	1	947,	0,
#Deleted in new
chr2_KZ208907v1_alt	119382	163867	chr2_KZ208907v1_alt:119382-163867	3	+	119382	119382	8553170	3	136,237,231,	0,3794,44254,
#Deleted in new
chr2_KZ208907v1_alt	122341	122803	chr2_KZ208907v1_alt:122341-122803	7	-	122341	122341	16724991	1	462,	0,
#Deleted in new
chr2_KZ208907v1_alt	123289	149005	chr2_KZ208907v1_alt:123289-149005	1	+	123289	123289	8553170	2	124,316,	0,25400,
#Deleted in new
chr2_KZ208908v1_alt	11790	11894	chr2_KZ208908v1_alt:11790-11894	3	-	11790	11790	8553170	1	104,	0,
#Deleted in new
chr2_KZ208908v1_alt	23535	24106	chr2_KZ208908v1_alt:23535-24106	7	-	23535	23535	16724991	1	571,	0,
#Deleted in new
chr2_KZ208908v1_alt	46313	46411	chr2_KZ208908v1_alt:46313-46411	7	-	46313	46313	16724991	1	98,	0,
#Deleted in new
chr2_KZ208908v1_alt	49400	49898	chr2_KZ208908v1_alt:49400-49898	7	-	49400	49400	16724991	1	498,	0,
#Deleted in new
chr2_KZ208908v1_alt	106526	110805	chr2_KZ208908v1_alt:106526-110805	7	-	106526	106526	16724991	2	282,246,	0,4033,
#Deleted in new
chr2_KZ208908v1_alt	106610	110802	chr2_KZ208908v1_alt:106610-110802	4	-	106610	106610	16724991	2	180,243,	0,3949,
#Deleted in new
chr2_KZ208908v1_alt	119900	122795	chr2_KZ208908v1_alt:119900-122795	3	-	119966	122767	0	3	339,243,37,	0,2505,2858,
#Deleted in new
chr2_KZ208908v1_alt	126430	128124	chr2_KZ208908v1_alt:126430-128124	3	-	126496	128086	0	3	339,243,47,	0,1304,1647,
#Deleted in new
chr2_KZ208908v1_alt	133687	135991	chr2_KZ208908v1_alt:133687-135991	7	-	133687	133687	16724991	2	527,551,	0,1753,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	23756	24501	chr3:23756-24501	3	+	23756	23756	8553170	2	56,534,	0,211,
#Deleted in new
chr3	195757	197199	chr3:195757-197199	0	-	195757	195757	8553170	4	157,45,53,233,	0,238,698,1209,
#Deleted in new
chr3	195757	196859	chr3:195757-196859	0	-	195757	195757	8553170	4	157,45,53,253,	0,238,698,849,
#Deleted in new
chr3	195757	197341	chr3:195757-197341	3	-	195757	195757	789624	5	157,45,53,96,375,	0,238,698,849,1209,
#Partially deleted in new
chr3	196595	409417	chr3:196595-409417	3	+	319776	405711	789624	28	468,80,185,106,188,123,171,48,121,185,132,141,112,167,166,125,102,198,71,223,116,205,123,180,159,132,73,3923,	0,48017,123087,129363,131571,144198,145316,146388,147993,152763,158044,163688,165103,166621,169354,181222,185583,185878,187220,192656,194105,194359,195079,198097,201631,202421,205030,208899,
#Partially deleted in new
chr3	196770	406852	chr3:196770-406852	1	+	319776	405711	789624	27	293,80,185,106,188,123,171,121,185,132,141,112,167,166,125,102,198,71,223,116,205,123,180,159,132,73,1358,	0,47842,122912,129188,131396,144023,145141,147818,152588,157869,163513,164928,166446,169179,181047,185408,185703,187045,192481,193930,194184,194904,197922,201456,202246,204855,208724,
#Partially deleted in new
chr3	196770	246856	chr3:196770-246856	0	+	196770	196770	8553170	3	293,80,289,	0,47842,49797,
#Partially deleted in new
chr3	196782	326064	chr3:196782-326064	0	+	319776	326064	789624	3	281,185,106,	0,122900,129176,
#Partially deleted in new
chr3	197289	328259	chr3:197289-328259	0	+	319776	328259	789624	5	79,80,185,106,93,	0,47323,122393,128669,130877,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	197642	248601	chr3:197642-248601	0	+	197642	197642	789624	3	450,80,2034,	0,46970,48925,
#Partially deleted in new
chr3	197643	399148	chr3:197643-399148	0	+	197646	197928	789624	25	449,80,185,106,188,123,171,121,185,132,141,112,167,166,125,102,198,71,223,116,205,123,180,159,132,	0,46969,122039,128315,130523,143150,144268,146945,151715,156996,162640,164055,165573,168306,180174,184535,184830,186172,191608,193057,193311,194031,197049,200583,201373,
#Partially deleted in new
chr3	198006	341946	chr3:198006-341946	0	+	319776	341946	789624	6	86,185,106,188,123,35,	0,121676,127952,130160,142787,143905,
#Partially deleted in new
chr3	198013	213679	chr3:198013-213679	0	+	198013	198013	8553170	2	79,476,	0,15190,
#Partially deleted in new
chr3	217534	328223	chr3:217534-328223	0	+	319776	328223	789624	5	166,80,185,106,57,	0,27078,102148,108424,110632,
#Deleted in new
chr3	282688	282792	chr3:282688-282792	3	-	282688	282688	8553170	1	104,	0,
#Deleted in new
chr3	308713	309322	chr3:308713-309322	7	-	308713	308713	16724991	1	609,	0,
#Partially deleted in new
chr3	319682	409412	chr3:319682-409412	1	+	319776	405711	789624	25	185,106,188,123,171,48,121,185,132,141,112,167,166,125,102,198,71,223,116,205,123,180,132,73,3918,	0,6276,8484,21111,22229,23301,24906,29676,34957,40601,42016,43534,46267,58135,62496,62791,64133,69569,71018,71272,71992,75010,79334,81943,85812,
#Partially deleted in new
chr3	319803	328458	chr3:319803-328458	0	+	319803	319803	8553170	3	64,106,292,	0,6155,8363,
#Partially deleted in new
chr3	361697	363502	chr3:361697-363502	0	+	361697	361697	8553170	2	113,286,	0,1519,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	363834	374052	chr3:363834-374052	0	-	363834	363834	8553170	2	189,236,	0,9982,
#Deleted in new
chr3	382185	384665	chr3:382185-384665	0	+	382185	382185	8553170	4	95,198,71,343,	0,288,1630,2137,
#Partially deleted in new
chr3	389444	405739	chr3:389444-405739	0	+	389444	405711	789624	8	30,116,205,123,180,132,73,245,	0,1256,1510,2230,5248,9572,12181,16050,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	536230	846015	chr3:536230-846015	3	+	536230	536230	789624	5	97,79,36,96,3640,	0,55874,213984,304484,306145,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	536252	842644	chr3:536252-842644	0	+	536252	536252	8553170	5	75,79,36,127,269,	0,55852,213962,290754,306123,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	617788	618314	chr3:617788-618314	7	-	617788	617788	16724991	1	526,	0,
#Partially deleted in new
chr3	857123	858091	chr3:857123-858091	3	+	857123	857123	8553170	2	150,347,	0,621,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	1008134	1012934	chr3:1008134-1012934	3	+	1008134	1008134	8553170	2	132,3567,	0,1233,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	1065579	1065875	chr3:1065579-1065875	3	-	1065579	1065579	8553170	1	296,	0,
#Partially deleted in new
chr3	1092575	1404217	chr3:1092575-1404217	3	+	1148008	1403418	789624	23	545,137,127,176,96,204,103,185,137,130,151,128,176,118,159,150,71,235,116,187,113,169,900,	0,55351,128111,135242,185837,203025,205313,229074,233239,234881,237209,259748,279723,280262,281028,281348,284429,290366,290717,293035,308857,309742,310742,
#Partially deleted in new
chr3	1092657	1403442	chr3:1092657-1403442	0	+	1092735	1092927	789624	22	463,127,176,96,204,103,185,137,130,151,128,176,118,159,150,71,235,116,187,113,169,125,	0,128029,135160,185755,202943,205231,228992,233157,234799,237127,259666,279641,280180,280946,281266,284347,290284,290635,292953,308775,309660,310660,
#Partially deleted in new
chr3	1092660	1403594	chr3:1092660-1403594	1	+	1148008	1403418	789624	23	469,137,127,176,96,204,103,185,137,130,151,128,176,118,159,150,71,235,116,187,113,169,277,	0,55266,128026,135157,185752,202940,205228,228989,233154,234796,237124,259663,279638,280177,280943,281263,284344,290281,290632,292950,308772,309657,310657,
#Partially deleted in new
chr3	1092721	1147967	chr3:1092721-1147967	0	+	1092735	1092927	789624	3	399,111,41,	0,35545,55205,
#Partially deleted in new
chr3	1093023	1298369	chr3:1093023-1298369	0	+	1148019	1173285	789624	8	97,137,115,127,176,96,204,481,	0,54903,80180,127663,134794,185389,202577,204865,
#Deleted in new
chr3	1394172	1394448	chr3:1394172-1394448	7	-	1394172	1394172	16724991	1	276,	0,
#Deleted in new
chr3	1401284	1402801	chr3:1401284-1402801	0	+	1401284	1401284	8553170	2	261,484,	0,1033,
#Deleted in new
chr3	1595776	1596245	chr3:1595776-1596245	7	-	1595776	1595776	16724991	1	469,	0,
#Deleted in new
chr3	1730069	1730474	chr3:1730069-1730474	7	+	1730069	1730069	16724991	1	405,	0,
#Deleted in new
chr3	1905650	1906125	chr3:1905650-1906125	7	+	1905650	1905650	16724991	1	475,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	1962380	1987470	chr3:1962380-1987470	3	-	1962380	1962380	8553170	2	255,102,	0,24988,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	2088932	2089211	chr3:2088932-2089211	3	-	2088932	2088932	8553170	1	279,	0,
#Partially deleted in new
chr3	2098812	2745687	chr3:2098812-2745687	0	+	2571503	2745687	789624	5	166,56,143,127,166,	0,240365,472603,637402,646709,
#Partially deleted in new
chr3	2098865	3042995	chr3:2098865-3042995	0	+	2571503	2887086	789624	21	113,376,56,143,127,176,96,198,185,137,130,151,128,176,118,159,150,71,235,113,19,	0,408,240312,472550,637349,646656,720620,767886,788174,801819,804010,826763,889479,927236,931992,935766,938313,940067,941171,943444,944111,
#Partially deleted in new
chr3	2098887	2736323	chr3:2098887-2736323	0	+	2571503	2736323	789624	6	91,82,85,56,143,109,	0,1670,163458,240290,472528,637327,
#Partially deleted in new
chr3	2098925	3057953	chr3:2098925-3057953	3	+	2571503	3056220	789624	25	53,82,56,143,127,176,96,198,103,185,137,130,151,128,176,121,159,150,71,235,113,187,113,169,1834,	0,1632,240252,472490,637289,646596,720560,767826,784219,788114,801759,803950,826703,889419,927176,931929,935706,938253,940007,941111,943384,944051,944666,954881,957194,
#Deleted in new
chr3	2098927	2099773	chr3:2098927-2099773	0	+	2098927	2098927	8553170	2	51,500,	0,346,
#Partially deleted in new
chr3	2110408	2144241	chr3:2110408-2144241	3	-	2110408	2110408	789624	3	224,90,112,	0,21952,33721,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr3	2238828	3057953	chr3:2238828-3057953	1	+	2571503	3056220	789624	24	240,56,143,127,176,96,198,103,185,137,130,151,128,176,121,159,150,71,235,113,187,113,169,1834,	0,100349,332587,497386,506693,580657,627923,644316,648211,661856,664047,686800,749516,787273,792026,795803,798350,800104,801208,803481,804148,804763,814978,817291,
#Partially deleted in new
chr3	2362257	2362738	chr3:2362257-2362738	7	+	2362257	2362257	16724991	1	481,	0,
#Partially deleted in new
chr3	2511349	2989013	chr3:2511349-2989013	0	+	2511349	2511349	8553170	12	348,143,127,176,96,198,103,185,137,130,151,669,	0,60066,224865,234172,308136,355402,371795,375690,389335,391526,414279,476995,
#Partially deleted in new
chr3	2511588	3037676	chr3:2511588-3037676	0	+	2511588	2511588	8553170	16	109,143,127,176,96,198,103,185,137,130,151,128,176,121,159,498,	0,59827,224626,233933,307897,355163,371556,375451,389096,391287,414040,476756,514513,519266,523043,525590,
#Partially deleted in new
chr3	2511669	2745697	chr3:2511669-2745697	0	+	2571503	2745697	789624	5	28,143,54,127,176,	0,59746,117856,224545,233852,
#Partially deleted in new
chr3	2571340	3057956	chr3:2571340-3057956	1	+	2571503	3056220	789624	22	218,127,176,96,198,103,185,137,130,151,128,176,121,159,150,71,235,113,187,113,169,1837,	0,164874,174181,248145,295411,311804,315699,329344,331535,354288,417004,454761,459514,463291,465838,467592,468696,470969,471636,472251,482466,484779,
#Partially deleted in new
chr3	2735872	2745627	chr3:2735872-2745627	0	+	2735872	2735872	8553170	2	469,106,	0,9649,
#Partially deleted in new
chr3	2866419	2887224	chr3:2866419-2887224	0	+	2866419	2866419	8553170	4	82,198,103,185,	0,332,16725,20620,
#Partially deleted in new
chr3	2882738	2887095	chr3:2882738-2887095	0	+	2882738	2882738	8553170	2	509,56,	0,4301,
#Partially deleted in new
chr3	2892214	3056355	chr3:2892214-3056355	1	+	2900728	3056220	789624	16	46,137,130,151,128,176,121,159,150,71,235,113,187,113,169,236,	0,8470,10661,33414,96130,133887,138640,142417,144964,146718,147822,150095,150762,151377,161592,163905,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	2900710	2927631	chr3:2900710-2927631	0	+	2900710	2927337	789624	4	111,130,151,334,	0,2165,24918,26587,
#Partially deleted in new
chr3	2900713	2999144	chr3:2900713-2999144	0	+	2900713	2900713	8553170	5	108,130,151,128,97,	0,2162,24915,87631,98334,
#Deleted in new
chr3	2985230	2985575	chr3:2985230-2985575	7	-	2985230	2985230	16724991	1	345,	0,
#Partially deleted in new
chr3	3039032	3061145	chr3:3039032-3061145	3	-	3039032	3039032	789624	4	1350,110,101,79,	0,2012,3880,22034,
#Partially deleted in new
chr3	3039623	3057953	chr3:3039623-3057953	0	+	3039623	3039623	8553170	6	648,113,187,113,169,1834,	0,2686,3353,3968,14183,16496,
#Partially deleted in new
chr3	3042841	3069242	chr3:3042841-3069242	0	-	3042841	3042841	8553170	4	172,166,130,150,	0,16373,18225,26251,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	3066325	3110374	chr3:3066325-3110374	1	-	3070224	3104984	789624	11	3986,85,97,188,154,139,146,85,69,142,430,	0,8456,10205,31544,31811,35366,36349,38577,39142,42224,43619,
#Partially deleted in new
chr3	3069548	3110374	chr3:3069548-3110374	3	-	3070224	3104984	0	12	763,85,97,139,146,188,154,139,146,85,142,430,	0,5233,6982,22675,25750,28321,28588,32143,33126,35354,39001,40396,
#Partially deleted in new
chr3	3069725	3110374	chr3:3069725-3110374	1	-	3070265	3104984	0	11	586,97,139,146,188,154,139,146,85,142,430,	0,6805,22498,25573,28144,28411,31966,32949,35177,38824,40219,
#Partially deleted in new
chr3	3069736	3109980	chr3:3069736-3109980	1	-	3070224	3104984	0	13	575,85,97,139,146,188,154,139,146,85,69,142,36,	0,5045,6794,22487,25562,28133,28400,31955,32938,35166,35731,38813,40208,
#Partially deleted in new
chr3	3089970	3110347	chr3:3089970-3110347	1	-	3090242	3104984	0	10	286,139,146,188,154,139,146,85,142,403,	0,2253,5328,7899,8166,11721,12704,14932,18579,19974,
#Partially deleted in new
chr3	3090172	3109980	chr3:3090172-3109980	1	-	3090242	3104984	0	11	84,139,146,188,154,139,146,85,69,142,36,	0,2051,5126,7697,7964,11519,12502,14730,15295,18377,19772,
#Partially deleted in new
chr3	3091803	3109980	chr3:3091803-3109980	1	-	3092215	3104984	0	10	559,146,188,154,139,146,85,69,142,36,	0,3495,6066,6333,9888,10871,13099,13664,16746,18141,
#Partially deleted in new
chr3	3092012	3109983	chr3:3092012-3109983	1	-	3092215	3104984	0	9	350,146,188,154,139,146,85,142,39,	0,3286,5857,6124,9679,10662,12890,16537,17932,
#Partially deleted in new
chr3	3097989	3126613	chr3:3097989-3126613	0	-	3097989	3104984	789624	7	68,154,139,146,85,142,54,	0,147,3702,4685,6913,10560,28570,
#Partially deleted in new
chr3	3101731	3110366	chr3:3101731-3110366	0	-	3101731	3104984	789624	5	99,146,85,142,367,	0,943,3171,6818,8268,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	3102912	3103015	chr3:3102912-3103015	3	+	3102912	3102912	8553170	1	103,	0,
#Deleted in new
chr3	3108583	3110365	chr3:3108583-3110365	0	-	3108583	3108583	8553170	2	108,455,	0,1327,
#Partially deleted in new
chr3	3126915	3149023	chr3:3126915-3149023	3	+	3129040	3148154	0	8	75,175,194,139,127,194,254,1118,	0,2098,10344,13594,17668,19514,20534,20990,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	3126950	3130679	chr3:3126950-3130679	1	+	3129040	3129944	0	3	40,175,761,	0,2063,2968,
#Partially deleted in new
chr3	3126951	3149023	chr3:3126951-3149023	1	+	3129040	3148154	0	8	39,175,194,139,127,134,254,1118,	0,2062,10308,13558,17632,19478,20498,20954,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	3126953	3129496	chr3:3126953-3129496	0	+	3126953	3126953	8553170	2	37,483,	0,2060,
#Partially deleted in new
chr3	3126964	3150879	chr3:3126964-3150879	0	+	3129040	3148154	0	10	26,175,194,139,127,194,254,282,140,340,	0,2049,10295,13545,17619,19465,20485,20941,22129,23575,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	3127019	3130679	chr3:3127019-3130679	1	+	3129040	3129944	0	3	999,175,761,	0,1994,2899,
#Partially deleted in new
chr3	3127019	3137297	chr3:3127019-3137297	0	+	3129040	3137297	789624	3	270,175,38,	0,1994,10240,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	3127060	3131752	chr3:3127060-3131752	0	+	3127060	3127060	8553170	3	229,175,463,	0,1953,4229,
#Partially deleted in new
chr3	3129154	3140728	chr3:3129154-3140728	0	+	3129154	3129154	8553170	3	34,194,219,	0,8105,11355,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	3144627	3179727	chr3:3144627-3179727	1	-	3145337	3179687	789624	12	872,163,132,65,116,85,63,160,150,203,107,107,	0,6255,7828,8796,9332,10119,11591,23006,28148,29431,30535,34993,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	3148991	3179691	chr3:3148991-3179691	0	-	3148991	3148991	8553170	7	2054,132,2858,160,150,203,71,	0,3464,4432,18642,23784,25067,30629,
#Partially deleted in new
chr3	3150010	3179710	chr3:3150010-3179710	3	-	3150864	3179687	0	11	1035,132,65,116,85,63,160,150,203,107,90,	0,2445,3413,3949,4736,6208,17623,22765,24048,25152,29610,
#Partially deleted in new
chr3	3150010	3179674	chr3:3150010-3179674	0	-	3150864	3179674	789624	10	1035,65,116,85,63,160,150,203,107,54,	0,3413,3949,4736,6208,17623,22765,24048,25152,29610,
#Partially deleted in new
chr3	3150010	3179710	chr3:3150010-3179710	1	-	3150864	3179687	0	11	1035,132,65,116,85,63,160,150,203,104,90,	0,2445,3413,3949,4736,6208,17623,22765,24048,25152,29610,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	3150010	3156784	chr3:3150010-3156784	0	-	3150010	3150010	8553170	3	1035,132,3361,	0,2445,3413,
#Partially deleted in new
chr3	3150859	3154970	chr3:3150859-3154970	0	-	3150859	3150859	8553170	5	186,132,65,116,224,	0,1596,2564,3100,3887,
#Partially deleted in new
chr3	3150987	3154192	chr3:3150987-3154192	0	-	3150987	3150987	8553170	4	58,132,65,233,	0,1468,2436,2972,
#Deleted in new
chr3	3152941	3153435	chr3:3152941-3153435	3	+	3152941	3152941	8553170	1	494,	0,
#Partially deleted in new
chr3	3154549	3172923	chr3:3154549-3172923	0	-	3154549	3154549	8553170	4	282,63,160,148,	0,1669,13084,18226,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	3156089	3174121	chr3:3156089-3174121	0	-	3156089	3156089	8553170	4	192,160,150,63,	0,11544,16686,17969,
#Partially deleted in new
chr3	3167429	3179674	chr3:3167429-3179674	0	-	3167621	3179674	789624	5	364,150,203,107,54,	0,5346,6629,7733,12191,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	3172175	3179701	chr3:3172175-3179701	0	-	3172175	3172175	8553170	5	471,150,203,107,81,	0,600,1883,2987,7445,
#Partially deleted in new
chr3	3172716	3175250	chr3:3172716-3175250	0	-	3172716	3172716	8553170	3	209,203,88,	0,1342,2446,
#Partially deleted in new
chr3	3173886	3179704	chr3:3173886-3179704	0	-	3173886	3173886	8553170	3	375,107,84,	0,1276,5734,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	3260806	3484115	chr3:3260806-3484115	1	-	3260806	3260806	8553170	6	88,132,51,164,98,77,	0,4913,5281,76493,180101,223232,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	3315305	3484097	chr3:3315305-3484097	1	-	3315305	3315305	8553170	4	332,164,173,59,	0,21994,67172,168733,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	3700813	3800875	chr3:3700813-3800875	0	-	3700813	3700813	789624	6	1648,79,82,199,161,175,	0,76911,78427,81689,88100,99887,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr3	3781351	4467261	chr3:3781351-4467261	0	-	3827419	4467245	789624	13	1350,161,164,268,177,60,114,115,123,83,75,174,286,	0,7562,41382,45890,287217,594978,629513,635776,636658,638712,667914,671524,685624,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	3782637	3799896	chr3:3782637-3799896	0	-	3782637	3782637	8553170	4	64,161,133,185,	0,6276,12658,17074,
#Partially deleted in new
chr3	3795238	3798214	chr3:3795238-3798214	0	-	3795238	3795238	8553170	2	190,314,	0,2662,
#Partially deleted in new
chr3	3799436	3847703	chr3:3799436-3847703	3	+	3844641	3846792	789624	2	483,3340,	0,44927,
#Deleted in new
chr3	3799695	3804192	chr3:3799695-3804192	0	+	3799695	3799695	8553170	3	224,282,65,	0,1269,4432,
#Partially deleted in new
chr3	3800870	3844579	chr3:3800870-3844579	0	+	3800870	3800870	8553170	2	376,216,	0,43493,
#Partially deleted in new
chr3	3981980	3984295	chr3:3981980-3984295	7	-	3981980	3981980	16724991	1	2315,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	4303303	4317567	chr3:4303303-4317567	3	+	4303370	4317246	0	3	223,864,1356,	0,9594,12908,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	4303360	4314402	chr3:4303360-4314402	1	+	4303370	4313839	0	2	166,1505,	0,9537,
#Partially deleted in new
chr3	4303626	4313101	chr3:4303626-4313101	0	+	4303626	4303626	8553170	2	464,204,	0,9271,
#Partially deleted in new
chr3	4361145	4467281	chr3:4361145-4467281	3	-	4362143	4467245	0	9	1109,60,114,115,123,83,75,174,306,	0,15184,49719,55982,56864,58918,88120,91730,105830,
#Partially deleted in new
chr3	4361765	4467264	chr3:4361765-4467264	1	-	4362143	4467245	0	8	489,60,114,115,123,83,174,289,	0,14564,49099,55362,56244,58298,91110,105210,
#Partially deleted in new
chr3	4361794	4467269	chr3:4361794-4467269	1	-	4362143	4467245	789624	5	460,60,114,174,294,	0,14535,49070,91081,105181,
#Partially deleted in new
chr3	4362108	4467273	chr3:4362108-4467273	1	-	4362143	4467245	0	8	146,114,115,123,83,75,174,298,	0,48756,55019,55901,57955,87157,90767,104867,
#Deleted in new
chr3	4414579	4414960	chr3:4414579-4414960	7	-	4414579	4414579	16724991	1	381,	0,
#Deleted in new
chr3	4490890	4493163	chr3:4490890-4493163	3	-	4490890	4490890	789624	2	478,380,	0,1893,
#Partially deleted in new
chr3	4493344	4847506	chr3:4493344-4847506	3	+	4516491	4846225	789624	59	261,76,108,71,116,87,159,99,84,147,96,45,155,100,161,142,159,173,120,198,252,142,154,188,139,55,166,171,66,138,126,201,252,126,129,121,185,149,112,133,191,181,254,201,111,96,123,105,193,123,176,165,196,93,140,166,161,162,1368,	0,1086,23131,27679,134418,146039,148748,150791,152042,152237,158778,160497,164779,167643,168737,169720,171793,174032,176309,177384,179791,180857,181723,183269,187208,188019,190041,190283,190936,191724,195150,197799,200145,203802,206468,209485,212822,216980,218412,239743,241819,273185,275166,281897,283919,286205,289274,290471,294602,301720,307080,312758,317920,319797,321078,321708,324737,343429,352794,
#Partially deleted in new
chr3	4493344	4521164	chr3:4493344-4521164	0	+	4493344	4493344	8553170	4	261,76,108,141,	0,1086,23131,27679,
#Partially deleted in new
chr3	4493347	4847840	chr3:4493347-4847840	1	+	4516491	4846225	789624	61	258,76,108,71,116,87,159,99,84,147,96,155,100,161,142,159,173,120,198,252,142,181,188,139,55,166,171,66,138,126,201,252,126,129,121,185,149,112,33,36,48,133,191,181,254,201,111,96,123,105,193,123,176,165,196,93,140,166,161,162,1702,	0,1083,23128,27676,134415,146036,148745,150788,152039,152234,158775,164776,167640,168734,169717,171790,174029,176306,177381,179788,180854,181720,183266,187205,188016,190038,190280,190933,191721,195147,197796,200142,203799,206465,209482,212819,216977,218409,224019,232198,233778,239740,241816,273182,275163,281894,283916,286202,289271,290468,294599,301717,307077,312755,317917,319794,321075,321705,324734,343426,352791,
#Partially deleted in new
chr3	4493349	4647370	chr3:4493349-4647370	1	+	4516491	4645764	8553170	10	256,76,108,71,116,87,159,99,84,1789,	0,1081,23126,27674,134413,146034,148743,150786,152037,152232,
#Partially deleted in new
chr3	4493369	4847497	chr3:4493369-4847497	1	+	4516491	4846225	789624	62	236,76,108,71,116,87,159,99,84,147,96,45,155,100,161,142,159,173,120,198,252,142,154,188,139,55,166,171,66,138,126,201,252,126,129,121,185,149,112,33,36,51,133,191,181,254,201,111,96,123,105,193,123,176,165,196,93,140,166,161,162,1359,	0,1061,23106,27654,134393,146014,148723,150766,152017,152212,158753,160472,164754,167618,168712,169695,171768,174007,176284,177359,179766,180832,181698,183244,187183,187994,190016,190258,190911,191699,195125,197774,200120,203777,206443,209460,212797,216955,218387,223997,232176,233753,239718,241794,273160,275141,281872,283894,286180,289249,290446,294577,301695,307055,312733,317895,319772,321053,321683,324712,343404,352769,
#Partially deleted in new
chr3	4493451	4847397	chr3:4493451-4847397	1	+	4516491	4846225	789624	58	154,76,108,71,116,87,159,99,84,147,96,155,100,161,142,159,173,120,198,252,142,154,188,139,55,166,171,66,138,126,201,252,126,129,121,185,149,112,133,191,181,254,201,111,96,123,105,193,123,176,165,196,93,140,166,161,162,1259,	0,979,23024,27572,134311,145932,148641,150684,151935,152130,158671,164672,167536,168630,169613,171686,173925,176202,177277,179684,180750,181616,183162,187101,187912,189934,190176,190829,191617,195043,197692,200038,203695,206361,209378,212715,216873,218305,239636,241712,273078,275059,281790,283812,286098,289167,290364,294495,301613,306973,312651,317813,319690,320971,321601,324630,343322,352687,
#Partially deleted in new
chr3	4493453	4847498	chr3:4493453-4847498	1	+	4516491	4846225	8553170	62	152,76,108,71,116,87,159,99,84,147,96,45,155,100,161,142,159,173,120,198,252,142,154,188,139,55,166,171,66,138,126,201,252,126,129,121,185,149,112,33,36,48,133,191,181,254,201,111,96,123,105,193,123,176,165,196,93,140,166,161,162,1360,	0,977,23022,27570,134309,145930,148639,150682,151933,152128,158669,160388,164670,167534,168628,169611,171684,173923,176200,177275,179682,180748,181614,183160,187099,187910,189932,190174,190827,191615,195041,197690,200036,203693,206359,209376,212713,216871,218303,223913,232092,233672,239634,241710,273076,275057,281788,283810,286096,289165,290362,294493,301611,306971,312649,317811,319688,320969,321599,324628,343320,352685,
#Partially deleted in new
chr3	4493535	4673442	chr3:4493535-4673442	0	+	4493535	4493535	8553170	20	70,76,108,71,116,87,159,99,84,147,96,155,100,161,142,159,173,120,198,307,	0,895,22940,27488,134227,145848,148557,150600,151851,152046,158587,164588,167452,168546,169529,171602,173841,176118,177193,179600,
#Partially deleted in new
chr3	4493549	4846710	chr3:4493549-4846710	1	+	4516491	4846225	789624	20	56,76,108,71,116,87,159,99,84,147,96,45,165,196,93,140,166,161,162,572,	0,881,22926,27474,134213,145834,148543,150586,151837,152032,158573,160292,312553,317715,319592,320873,321503,324532,343224,352589,
#Partially deleted in new
chr3	4493560	4847206	chr3:4493560-4847206	1	+	4516491	4846225	8553170	61	45,76,108,71,116,87,159,99,84,147,96,155,100,161,142,159,173,120,198,252,142,181,188,139,55,166,171,66,138,126,201,252,126,129,121,185,149,112,33,36,51,133,191,181,254,201,111,96,123,105,193,123,176,165,196,93,140,166,161,162,1068,	0,870,22915,27463,134202,145823,148532,150575,151826,152021,158562,164563,167427,168521,169504,171577,173816,176093,177168,179575,180641,181507,183053,186992,187803,189825,190067,190720,191508,194934,197583,199929,203586,206252,209269,212606,216764,218196,223806,231985,233562,239527,241603,272969,274950,281681,283703,285989,289058,290255,294386,301504,306864,312542,317704,319581,320862,321492,324521,343213,352578,
#Partially deleted in new
chr3	4493582	4847422	chr3:4493582-4847422	1	+	4516491	4846225	8553170	62	23,76,108,71,116,87,159,99,84,147,96,45,155,100,161,142,159,173,120,198,252,142,181,188,139,55,166,171,66,138,126,201,252,126,129,121,185,149,112,33,36,48,133,191,181,254,201,111,96,123,105,193,123,176,165,196,93,140,166,161,162,1284,	0,848,22893,27441,134180,145801,148510,150553,151804,151999,158540,160259,164541,167405,168499,169482,171555,173794,176071,177146,179553,180619,181485,183031,186970,187781,189803,190045,190698,191486,194912,197561,199907,203564,206230,209247,212584,216742,218174,223784,231963,233543,239505,241581,272947,274928,281659,283681,285967,289036,290233,294364,301482,306842,312520,317682,319559,320840,321470,324499,343191,352556,
#Partially deleted in new
chr3	4516486	4847326	chr3:4516486-4847326	1	+	4516491	4846225	8553170	59	97,71,116,87,159,99,84,147,96,155,100,161,142,159,173,120,198,252,142,154,188,139,55,166,171,66,138,126,201,252,126,129,121,185,149,112,33,36,48,133,191,181,254,201,111,96,123,105,193,123,176,165,196,93,140,166,161,162,1188,	0,4537,111276,122897,125606,127649,128900,129095,135636,141637,144501,145595,146578,148651,150890,153167,154242,156649,157715,158581,160127,164066,164877,166899,167141,167794,168582,172008,174657,177003,180660,183326,186343,189680,193838,195270,200880,209059,210639,216601,218677,250043,252024,258755,260777,263063,266132,267329,271460,278578,283938,289616,294778,296655,297936,298566,301595,320287,329652,
#Partially deleted in new
chr3	4516491	4847395	chr3:4516491-4847395	1	+	4516491	4846225	789624	59	92,71,116,87,159,99,84,147,96,155,100,161,142,159,173,120,198,252,142,181,188,139,55,166,171,66,138,126,201,252,126,129,121,185,149,112,33,36,48,133,191,181,254,201,111,96,123,105,193,123,176,165,196,93,140,166,161,162,1257,	0,4532,111271,122892,125601,127644,128895,129090,135631,141632,144496,145590,146573,148646,150885,153162,154237,156644,157710,158576,160122,164061,164872,166894,167136,167789,168577,172003,174652,176998,180655,183321,186338,189675,193833,195265,200875,209054,210634,216596,218672,250038,252019,258750,260772,263058,266127,267324,271455,278573,283933,289611,294773,296650,297931,298561,301590,320282,329647,
#Partially deleted in new
chr3	4596139	4639409	chr3:4596139-4639409	0	+	4596139	4596139	8553170	3	45,116,26,	0,31623,43244,
#Partially deleted in new
chr3	4639383	4671786	chr3:4639383-4671786	0	+	4639383	4671786	8553170	15	87,159,99,84,147,96,155,100,161,142,159,173,120,198,262,	0,2709,4752,6003,6198,12739,18740,21604,22698,23681,25754,27993,30270,31345,32141,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	4644617	4649468	chr3:4644617-4649468	0	+	4644617	4644617	8553170	2	853,3887,	0,964,
#Partially deleted in new
chr3	4670885	4847184	chr3:4670885-4847184	0	+	4670885	4846225	8553170	42	41,252,142,154,188,139,55,166,171,66,138,126,201,252,126,129,121,185,149,112,33,36,133,191,181,254,201,111,96,123,105,193,123,176,165,196,93,140,166,161,162,1046,	0,2250,3316,4182,5728,9667,10478,12500,12742,13395,14183,17609,20258,22604,26261,28927,31944,35281,39439,40871,46481,54660,62202,64278,95644,97625,104356,106378,108664,111733,112930,117061,124179,129539,135217,140379,142256,143537,144167,147196,165888,175253,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	4673293	4676195	chr3:4673293-4676195	0	+	4673293	4675586	8553170	3	94,142,1128,	0,908,1774,
#Partially deleted in new
chr3	4674968	4847103	chr3:4674968-4847103	0	+	4674968	4674968	8553170	40	280,188,139,55,166,171,66,138,126,201,252,126,129,121,185,149,112,33,36,51,133,191,181,254,201,111,96,123,105,193,123,176,165,196,93,140,166,161,162,965,	0,1645,5584,6395,8417,8659,9312,10100,13526,16175,18521,22178,24844,27861,31198,35356,36788,42398,50577,52154,58119,60195,91561,93542,100273,102295,104581,107650,108847,112978,120096,125456,131134,136296,138173,139454,140084,143113,161805,171170,
#Partially deleted in new
chr3	4675140	4847286	chr3:4675140-4847286	0	+	4675140	4846225	8553170	39	81,188,139,55,166,171,66,138,126,201,252,126,129,121,185,149,112,33,36,48,133,191,181,254,201,111,96,123,105,193,176,165,196,93,140,166,161,162,1148,	0,1473,5412,6223,8245,8487,9140,9928,13354,16003,18349,22006,24672,27689,31026,35184,36616,42226,50405,51985,57947,60023,91389,93370,100101,102123,104409,107478,108675,112806,125284,130962,136124,138001,139282,139912,142941,161633,170998,
#Partially deleted in new
chr3	4680677	4847380	chr3:4680677-4847380	0	+	4680677	4846225	8553170	39	14,55,166,171,66,138,126,201,252,126,129,121,185,149,112,33,36,48,133,191,181,254,201,111,96,123,105,193,123,33,176,165,196,93,140,166,161,162,1242,	0,686,2708,2950,3603,4391,7817,10466,12812,16469,19135,22152,25489,29647,31079,36689,44868,46448,52410,54486,85852,87833,94564,96586,98872,101941,103138,107269,114387,118677,119747,125425,130587,132464,133745,134375,137404,156096,165461,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	4683512	4726869	chr3:4683512-4726869	0	+	4683512	4683512	8553170	15	39,171,66,138,126,201,252,126,129,121,185,149,112,33,1324,	0,115,768,1556,4982,7631,9977,13634,16300,19317,22654,26812,28244,33854,42033,
#Partially deleted in new
chr3	4685172	4847353	chr3:4685172-4847353	0	+	4685172	4846225	8553170	34	34,126,201,252,126,129,121,185,149,112,33,36,51,133,191,181,254,201,111,96,123,105,193,123,33,176,165,196,93,140,166,161,162,1215,	0,3322,5971,8317,11974,14640,17657,20994,25152,26584,32194,40373,41950,47915,49991,81357,83338,90069,92091,94377,97446,98643,102774,109892,114182,115252,120930,126092,127969,129250,129880,132909,151601,160966,
#Partially deleted in new
chr3	4691323	4713831	chr3:4691323-4713831	0	+	4691323	4691323	8553170	8	21,252,126,129,121,185,149,2075,	0,2166,5823,8489,11506,14843,19001,20433,
#Partially deleted in new
chr3	4693599	4847242	chr3:4693599-4847242	0	+	4693599	4711761	8553170	31	142,126,129,121,185,38,149,112,33,36,48,133,191,181,254,201,111,96,123,105,193,123,176,165,196,93,140,166,161,162,1104,	0,3547,6213,9230,12567,16092,16725,18157,23767,31946,33526,39488,41564,72930,74911,81642,83664,85950,89019,90216,94347,101465,106825,112503,117665,119542,120823,121453,124482,143174,152539,
#Partially deleted in new
chr3	4699830	4738325	chr3:4699830-4738325	0	+	4699830	4737286	8553170	11	111,121,185,149,112,33,36,48,133,191,1147,	0,2999,6336,10494,11926,17536,25715,27295,33257,35333,37348,
#Partially deleted in new
chr3	4706166	4847293	chr3:4706166-4847293	0	+	4706166	4846225	8553170	4	185,149,112,1155,	0,4158,5590,139972,
#Partially deleted in new
chr3	4706197	4735309	chr3:4706197-4735309	0	+	4706197	4735309	8553170	6	154,149,112,51,133,146,	0,4127,5559,20925,26890,28966,
#Partially deleted in new
chr3	4710432	4718226	chr3:4710432-4718226	0	+	4710432	4710432	8553170	3	41,112,860,	0,1324,6934,
#Partially deleted in new
chr3	4711585	4735210	chr3:4711585-4735210	0	+	4711585	4711585	8553170	6	283,33,36,48,133,47,	0,5781,13960,15540,21502,23578,
#Partially deleted in new
chr3	4711600	4847270	chr3:4711600-4847270	0	+	4711600	4711600	8553170	21	268,133,191,181,254,201,111,96,123,105,193,123,176,165,196,93,140,166,161,162,1132,	0,21487,23563,54929,56910,63641,65663,67949,71018,72215,76346,83464,88824,94502,99664,101541,102822,103452,106481,125173,134538,
#Partially deleted in new
chr3	4724376	4735625	chr3:4724376-4735625	0	+	4724376	4724376	8553170	3	102,133,462,	0,8711,10787,
#Partially deleted in new
chr3	4730382	4847370	chr3:4730382-4847370	0	+	4730382	4730382	8553170	20	2838,191,181,254,201,111,96,123,105,193,123,176,165,196,93,140,166,161,162,1232,	0,4781,36147,38128,44859,46881,49167,52236,53433,57564,64682,70042,75720,80882,82759,84040,84670,87699,106391,115756,
#Deleted in new
chr3	4749191	4751590	chr3:4749191-4751590	3	-	4749191	4749191	789624	2	819,645,	0,1754,
#Deleted in new
chr3	4750332	4750685	chr3:4750332-4750685	3	+	4750332	4750332	8553170	1	353,	0,
#Partially deleted in new
chr3	4768266	4775334	chr3:4768266-4775334	0	+	4768266	4768266	8553170	2	498,93,	0,6975,
#Partially deleted in new
chr3	4774631	4777810	chr3:4774631-4777810	0	+	4774631	4774631	8553170	2	811,547,	0,2632,
#Partially deleted in new
chr3	4775428	4797790	chr3:4775428-4797790	0	+	4775428	4775428	8553170	7	14,111,96,123,105,193,2726,	0,1835,4121,7190,8387,12518,19636,
#Partially deleted in new
chr3	4782339	4788458	chr3:4782339-4788458	0	+	4782339	4782339	8553170	3	402,105,512,	0,1476,5607,
#Partially deleted in new
chr3	4783295	4788432	chr3:4783295-4788432	0	+	4783295	4783295	8553170	3	72,105,486,	0,520,4651,
#Partially deleted in new
chr3	4794999	4846343	chr3:4794999-4846343	0	+	4794999	4794999	8553170	10	188,176,165,196,93,140,166,161,162,205,	0,5425,11103,16265,18142,19423,20053,23082,41774,51139,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	4798729	4847372	chr3:4798729-4847372	0	+	4798729	4798729	8553170	9	1871,165,196,93,140,166,161,162,1234,	0,7373,12535,14412,15693,16323,19352,38044,47409,
#Partially deleted in new
chr3	4799124	4847248	chr3:4799124-4847248	0	+	4799124	4799124	8553170	10	263,176,165,196,93,140,166,161,162,1110,	0,1300,6978,12140,14017,15298,15928,18957,37649,47014,
#Partially deleted in new
chr3	4799740	4847304	chr3:4799740-4847304	0	+	4799740	4799740	8553170	10	241,176,165,196,93,140,166,161,162,1166,	0,684,6362,11524,13401,14682,15312,18341,37033,46398,
#Partially deleted in new
chr3	4799783	4847270	chr3:4799783-4847270	0	+	4799783	4799783	8553170	10	248,176,165,196,93,140,166,161,162,1132,	0,641,6319,11481,13358,14639,15269,18298,36990,46355,
#Partially deleted in new
chr3	4799794	4847348	chr3:4799794-4847348	0	+	4799794	4799794	8553170	10	209,176,165,196,93,140,166,161,162,1210,	0,630,6308,11470,13347,14628,15258,18287,36979,46344,
#Partially deleted in new
chr3	4800204	4811460	chr3:4800204-4811460	0	+	4800204	4800204	8553170	4	95,176,165,196,	0,220,5898,11060,
#Partially deleted in new
chr3	4804168	4847381	chr3:4804168-4847381	0	+	4804168	4804168	8553170	9	118,165,196,93,140,166,161,162,1243,	0,1934,7096,8973,10254,10884,13913,32605,41970,
#Partially deleted in new
chr3	4804197	4847220	chr3:4804197-4847220	0	+	4804197	4804197	8553170	10	89,146,165,196,93,140,166,161,162,1082,	0,402,1905,7067,8944,10225,10855,13884,32576,41941,
#Partially deleted in new
chr3	4804212	4847353	chr3:4804212-4847353	0	+	4804212	4804212	8553170	9	533,165,196,93,140,166,161,162,1215,	0,1890,7052,8929,10210,10840,13869,32561,41926,
#Partially deleted in new
chr3	4804241	4847380	chr3:4804241-4847380	0	+	4804241	4804241	8553170	9	201,165,196,93,140,166,161,162,1242,	0,1861,7023,8900,10181,10811,13840,32532,41897,
#Partially deleted in new
chr3	4804915	4847256	chr3:4804915-4847256	0	+	4804915	4804915	8553170	9	127,165,196,93,140,166,161,162,1118,	0,1187,6349,8226,9507,10137,13166,31858,41223,
#Partially deleted in new
chr3	4813046	4818239	chr3:4813046-4818239	0	+	4813046	4813046	8553170	4	188,140,166,158,	0,1376,2006,5035,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	4814293	4856755	chr3:4814293-4856755	0	-	4814293	4814293	8553170	3	138,72,120,	0,16653,42342,
#Partially deleted in new
chr3	4814296	4887293	chr3:4814296-4887293	3	-	4814296	4814296	8553170	4	135,72,66,65,	0,16650,71426,72932,
#Partially deleted in new
chr3	4814296	4885788	chr3:4814296-4885788	0	-	4814296	4814296	8553170	4	135,117,72,66,	0,11449,16650,71426,
#Partially deleted in new
chr3	4814300	4831390	chr3:4814300-4831390	0	-	4814300	4814300	8553170	4	131,117,72,115,	0,11445,16646,16975,
#Partially deleted in new
chr3	4814304	4831349	chr3:4814304-4831349	1	-	4814304	4814304	8553170	5	127,119,117,72,74,	0,3128,11441,16642,16971,
#Deleted in new
chr3	4814311	4815173	chr3:4814311-4815173	1	-	4814311	4814311	8553170	2	120,335,	0,527,
#Partially deleted in new
chr3	4814311	4816276	chr3:4814311-4816276	0	-	4814311	4814311	8553170	2	120,104,	0,1861,
#Partially deleted in new
chr3	4814322	4847451	chr3:4814322-4847451	0	+	4814322	4814322	8553170	5	240,166,161,162,1313,	0,730,3759,22451,31816,
#Partially deleted in new
chr3	4814527	4836976	chr3:4814527-4836976	0	+	4814527	4836976	8553170	4	35,166,161,203,	0,525,3554,22246,
#Partially deleted in new
chr3	4814608	4847434	chr3:4814608-4847434	1	+	4815100	4846225	8553170	4	610,161,162,1296,	0,3473,22165,31530,
#Partially deleted in new
chr3	4814618	4847154	chr3:4814618-4847154	1	+	4815100	4846225	8553170	5	145,166,161,162,1016,	0,434,3463,22155,31520,
#Partially deleted in new
chr3	4814638	4847181	chr3:4814638-4847181	1	+	4815100	4846225	8553170	5	94,166,161,162,1043,	0,414,3443,22135,31500,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	4896808	4979961	chr3:4896808-4979961	0	-	4896808	4896808	789624	3	1891,157,167,	0,3732,82986,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	4896808	4979961	chr3:4896808-4979961	3	-	4896808	4896808	789624	4	1891,157,140,167,	0,3732,52750,82986,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	4898225	4906501	chr3:4898225-4906501	0	-	4898225	4898225	789624	3	710,157,126,	0,2315,8150,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	4898678	4979937	chr3:4898678-4979937	0	-	4898678	4898678	8553170	3	257,157,143,	0,1862,81116,
#Deleted in new
chr3	4979115	4985323	chr3:4979115-4985323	3	+	4979718	4983692	789624	5	683,70,108,124,2488,	0,846,1185,2276,3720,
#Deleted in new
chr3	4979436	4983268	chr3:4979436-4983268	0	+	4979436	4979436	8553170	4	362,447,124,433,	0,525,1955,3399,
#Deleted in new
chr3	4980231	4981610	chr3:4980231-4981610	0	+	4980231	4980231	8553170	2	177,219,	0,1160,
#Deleted in new
chr3	5068675	5069044	chr3:5068675-5069044	7	-	5068675	5068675	16724991	1	369,	0,
#Partially deleted in new
chr3	5080211	5084429	chr3:5080211-5084429	7	-	5080211	5080211	16724991	6	156,766,52,566,434,138,	0,464,1359,2348,3239,4080,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	5086177	5086279	chr3:5086177-5086279	3	-	5086177	5086177	8553170	1	102,	0,
#Deleted in new
chr3	5099626	5099861	chr3:5099626-5099861	7	+	5099626	5099626	16724991	1	235,	0,
#Partially deleted in new
chr3	5122219	5180911	chr3:5122219-5180911	3	+	5122465	5178713	0	7	369,81,74,94,68,71,2248,	0,48283,49930,50427,51797,52124,56444,
#Partially deleted in new
chr3	5122244	5180912	chr3:5122244-5180912	1	+	5122465	5178713	0	7	344,81,74,94,68,71,2249,	0,48258,49905,50402,51772,52099,56419,
#Partially deleted in new
chr3	5122248	5172735	chr3:5122248-5172735	0	+	5122293	5128473	789624	5	340,125,81,74,89,	0,6211,48254,49901,50398,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	5122291	5170937	chr3:5122291-5170937	0	+	5122291	5122291	8553170	2	297,435,	0,48211,
#Partially deleted in new
chr3	5122291	5179646	chr3:5122291-5179646	0	+	5122293	5170519	789624	7	297,54,74,94,68,71,983,	0,48211,49858,50355,51725,52052,56372,
#Partially deleted in new
chr3	5122295	5179805	chr3:5122295-5179805	1	+	5122465	5178783	0	5	293,81,74,94,1142,	0,48207,49854,50351,56368,
#Partially deleted in new
chr3	5156904	5187329	chr3:5156904-5187329	3	-	5156904	5156904	8553170	4	119,90,88,375,	0,857,29519,30050,
#Partially deleted in new
chr3	5170551	5178969	chr3:5170551-5178969	0	+	5170551	5170551	8553170	4	32,43,71,306,	0,3490,3792,8112,
#Partially deleted in new
chr3	5174252	5178708	chr3:5174252-5178708	0	+	5174252	5174252	8553170	2	162,45,	0,4411,
#Deleted in new
chr3	5187171	5188298	chr3:5187171-5188298	3	-	5187171	5187171	8553170	1	1127,	0,
#Partially deleted in new
chr3	5187645	5208172	chr3:5187645-5208172	0	+	5188192	5201794	789624	8	39,134,73,172,184,175,121,80,	0,535,7563,14107,15320,17421,19507,20447,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	5187672	5219957	chr3:5187672-5219957	3	+	5187805	5215918	789624	12	642,73,104,172,184,175,121,171,74,97,204,4129,	0,7536,11919,14080,15293,17394,19480,20420,22502,23447,25646,28156,
#Partially deleted in new
chr3	5187719	5211406	chr3:5187719-5211406	0	+	5187719	5187719	8553170	10	595,73,104,172,184,175,121,171,74,287,	0,7489,11872,14033,15246,17347,19433,20373,22455,23400,
#Deleted in new
chr3	5187763	5189583	chr3:5187763-5189583	0	+	5187782	5187944	789624	2	551,179,	0,1641,
#Partially deleted in new
chr3	5187805	5195284	chr3:5187805-5195284	0	+	5187805	5187805	8553170	2	509,76,	0,7403,
#Partially deleted in new
chr3	5188348	5211298	chr3:5188348-5211298	1	+	5199594	5211252	789624	10	110,73,104,172,184,175,121,171,74,179,	0,6860,11243,13404,14617,16718,18804,19744,21826,22771,
#Partially deleted in new
chr3	5195105	5201779	chr3:5195105-5201779	0	+	5195105	5195105	8553170	3	176,104,27,	0,4486,6647,
#Partially deleted in new
chr3	5250176	5250255	chr3:5250176-5250255	3	-	5250176	5250176	5263520	1	79,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	5252925	5253223	chr3:5252925-5253223	3	-	5252925	5252925	8553170	1	298,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	5255534	5256761	chr3:5255534-5256761	3	-	5255534	5255534	8553170	2	281,304,	0,923,
#Partially deleted in new
chr3	5962841	6124120	chr3:5962841-6124120	3	+	5962841	5962841	8553170	3	240,82,145,	0,592,161134,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	6148483	6365885	chr3:6148483-6365885	3	+	6148483	6148483	8553170	3	95,47,157,	0,210417,217245,
#Deleted in new
chr3	6208268	6208571	chr3:6208268-6208571	7	+	6208268	6208268	16724991	2	100,141,	0,162,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	6490733	6584090	chr3:6490733-6584090	1	+	6490733	6490733	8553170	3	209,93,459,	0,87311,92898,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	6490802	6557959	chr3:6490802-6557959	0	+	6490802	6490802	8553170	2	144,373,	0,66784,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	6507780	6694798	chr3:6507780-6694798	0	+	6507780	6507780	8553170	2	172,74,	0,186944,
#Partially deleted in new
chr3	6632357	6805449	chr3:6632357-6805449	0	-	6632357	6632357	789624	4	222,111,89,61,	0,2729,158695,173031,
#Partially deleted in new
chr3	6692318	6693088	chr3:6692318-6693088	7	+	6692318	6692318	16724991	2	311,121,	0,649,
#Partially deleted in new
chr3	6694722	6697870	chr3:6694722-6697870	1	+	6694722	6694722	8553170	2	155,475,	0,2673,
#Partially deleted in new
chr3	6721314	6791105	chr3:6721314-6791105	0	-	6721314	6721314	8553170	2	391,53,	0,69738,
#Partially deleted in new
chr3	6731171	6805438	chr3:6731171-6805438	3	-	6731171	6731171	789624	4	217,98,89,50,	0,5568,59881,74217,
#Partially deleted in new
chr3	6739537	6805427	chr3:6739537-6805427	1	-	6739537	6739537	8553170	5	49,117,192,89,39,	0,249,899,51515,65851,
#Partially deleted in new
chr3	6740366	6742687	chr3:6740366-6742687	0	-	6740366	6740366	8553170	2	250,159,	0,2162,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	6770000	7146656	chr3:6770000-7146656	0	+	6770052	6828676	789624	5	118,95,74,87,205,	0,16591,58630,114219,376451,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	6770068	7306609	chr3:6770068-7306609	0	+	7146556	7306609	789624	5	50,74,217,142,112,	0,58562,376383,528615,536429,
#Deleted in new
chr3	6773036	6773343	chr3:6773036-6773343	7	-	6773036	6773036	16724991	1	307,	0,
#Partially deleted in new
chr3	6788933	6805409	chr3:6788933-6805409	0	-	6788933	6788933	8553170	3	225,89,21,	0,2119,16455,
#Partially deleted in new
chr3	6861114	7741511	chr3:6861114-7741511	3	+	6861388	7740406	0	10	793,217,142,155,141,201,140,936,247,1155,	0,285337,437569,445383,553908,591492,600468,717307,818934,879242,
#Partially deleted in new
chr3	6861114	7693670	chr3:6861114-7693670	0	+	6861388	7686427	0	13	793,217,142,155,141,201,140,936,247,92,68,119,38,	0,285337,437569,445383,553908,591492,600468,717307,818934,825242,829924,830095,832518,
#Partially deleted in new
chr3	6861114	7741533	chr3:6861114-7741533	1	+	6861388	7686427	0	11	793,217,142,155,141,201,140,936,247,92,1177,	0,285337,437569,445383,553908,591492,600468,717307,818934,825242,879242,
#Partially deleted in new
chr3	6861239	7693686	chr3:6861239-7693686	0	+	6861388	7691247	0	11	668,217,142,155,141,201,140,936,247,119,54,	0,285212,437444,445258,553783,591367,600343,717182,818809,829970,832393,
#Partially deleted in new
chr3	6861239	7693686	chr3:6861239-7693686	1	+	6861388	7693655	0	10	668,217,142,155,141,201,140,936,247,54,	0,285212,437444,445258,553783,591367,600343,717182,818809,832393,
#Partially deleted in new
chr3	6861239	7693686	chr3:6861239-7693686	0	+	6861388	7691082	789624	12	668,217,142,155,141,201,140,936,247,68,119,54,	0,285212,437444,445258,553783,591367,600343,717182,818809,829799,829970,832393,
#Partially deleted in new
chr3	6862742	7306652	chr3:6862742-7306652	0	+	6862980	7146491	789624	5	259,53,217,142,155,	0,93824,283709,435941,443755,
#Deleted in new
chr3	6892631	6894022	chr3:6892631-6894022	3	-	6892631	6892631	789624	2	417,103,	0,1288,
#Partially deleted in new
chr3	7298576	7415164	chr3:7298576-7415164	0	+	7298576	7298576	8553170	3	249,155,142,	0,7921,116446,
#Partially deleted in new
chr3	7298682	7686427	chr3:7298682-7686427	1	+	7298682	7686427	789624	8	143,155,141,201,140,936,247,71,	0,7815,116340,153924,162900,279739,381366,387674,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	7298682	7682335	chr3:7298682-7682335	0	+	7298682	7298682	8553170	7	143,155,141,201,140,936,2287,	0,7815,116340,153924,162900,279739,381366,
#Partially deleted in new
chr3	7403049	7578490	chr3:7403049-7578490	0	+	7403177	7578490	789624	5	132,141,201,140,69,	0,11973,49557,58533,175372,
#Partially deleted in new
chr3	7451780	7636441	chr3:7451780-7636441	0	+	7451780	7451780	8553170	8	39,201,140,183,156,936,93,189,	0,826,9802,107380,109637,126641,156221,184472,
#Partially deleted in new
chr3	7519740	7535284	chr3:7519740-7535284	3	-	7519740	7519740	789624	3	275,117,38,	0,423,15506,
#Partially deleted in new
chr3	7520137	7560333	chr3:7520137-7560333	0	-	7520137	7520137	8553170	2	143,51,	0,40145,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	7606889	7607897	chr3:7606889-7607897	3	-	7606889	7606889	8553170	1	1008,	0,
#Partially deleted in new
chr3	7693632	7694463	chr3:7693632-7694463	0	+	7693632	7693632	8553170	2	64,96,	0,735,
#Partially deleted in new
chr3	7954638	8501598	chr3:7954638-8501598	3	-	7954638	7954638	8553170	6	184,157,77,86,300,128,	0,671,37587,540042,543911,546832,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	8079321	8112924	chr3:8079321-8112924	0	+	8079321	8079321	8553170	6	53,66,226,92,94,35,	0,10165,11890,17798,27790,33568,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	8089486	8125538	chr3:8089486-8125538	3	+	8089486	8089486	8553170	9	66,254,226,92,94,255,120,137,22,	0,417,1725,7633,17625,23403,30576,33162,36030,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	8221146	8501655	chr3:8221146-8501655	1	-	8221146	8221146	789624	4	1573,86,300,185,	0,273534,277403,280324,
#Deleted in new
chr3	8364528	8364648	chr3:8364528-8364648	3	-	8364528	8364528	8553170	1	120,	0,
#Deleted in new
chr3	8364706	8366392	chr3:8364706-8366392	3	-	8364706	8364706	8553170	3	670,206,62,	0,887,1624,
#Partially deleted in new
chr3	8498484	8501629	chr3:8498484-8501629	0	-	8498484	8498484	8553170	2	365,159,	0,2986,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	8501706	8574673	chr3:8501706-8574673	3	+	8501938	8567598	789624	6	274,89,256,336,216,7234,	0,31030,35478,46861,63725,65733,
#Partially deleted in new
chr3	8501806	8568125	chr3:8501806-8568125	1	+	8532774	8567598	789624	5	174,89,336,216,686,	0,30930,46761,63625,65633,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	8501806	8550449	chr3:8501806-8550449	1	+	8501938	8549894	789624	5	174,89,256,336,576,	0,30930,35378,46761,48067,
#Partially deleted in new
chr3	8501822	8548863	chr3:8501822-8548863	0	+	8514935	8548863	789624	5	158,71,89,256,296,	0,13102,30914,35362,46745,
#Partially deleted in new
chr3	8501824	8537518	chr3:8501824-8537518	0	+	8501824	8501824	8553170	3	156,89,334,	0,30912,35360,
#Partially deleted in new
chr3	8501857	8567621	chr3:8501857-8567621	1	+	8537272	8567598	789624	5	123,256,336,216,182,	0,35327,46710,63574,65582,
#Partially deleted in new
chr3	8501887	8567764	chr3:8501887-8567764	0	+	8501938	8548613	789624	5	93,89,336,216,325,	0,30849,46680,63544,65552,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	8573725	8593124	chr3:8573725-8593124	3	-	8573725	8573725	8553170	2	149,412,	0,18987,
#Partially deleted in new
chr3	8619399	8652074	chr3:8619399-8652074	1	-	8619867	8633938	789624	12	615,108,106,93,86,63,125,61,276,82,99,85,	0,4149,6142,6829,8298,10264,11405,12649,14266,15900,16359,32590,
#Partially deleted in new
chr3	8619399	8644798	chr3:8619399-8644798	3	-	8619867	8644758	789624	12	615,108,106,93,86,63,125,61,130,82,99,68,	0,4149,6142,6829,8298,10264,11405,12649,14266,15900,16359,25331,
#Partially deleted in new
chr3	8619405	8644794	chr3:8619405-8644794	0	-	8633781	8644758	789624	13	609,108,106,93,86,63,125,61,130,248,82,99,64,	0,4143,6136,6823,8292,10258,11399,12643,14260,14992,15894,16353,25325,
#Partially deleted in new
chr3	8619405	8652061	chr3:8619405-8652061	0	-	8633781	8635782	789624	12	609,108,106,93,86,63,125,61,130,82,99,72,	0,4143,6136,6823,8292,10258,11399,12643,14260,15894,16353,32584,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	8619582	8677408	chr3:8619582-8677408	0	-	8659740	8671023	789624	17	432,108,106,93,870,63,125,61,130,82,99,122,89,312,168,156,203,	0,3966,5959,6646,7331,10081,11222,12466,14083,15717,16176,20365,39342,39907,44161,51415,57623,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr3	8619594	8682071	chr3:8619594-8682071	1	-	8619867	8633938	789624	19	420,108,106,93,86,63,125,61,276,82,99,122,89,59,156,142,148,145,181,	0,3954,5947,6634,8103,10069,11210,12454,14071,15705,16164,20353,39330,44149,51403,52299,57611,60110,62296,
#Partially deleted in new
chr3	8619599	8640015	chr3:8619599-8640015	0	-	8619599	8619599	8553170	12	415,208,106,93,86,63,125,61,980,82,99,68,	0,3849,5942,6629,8098,10064,11205,12449,14066,15700,16159,20348,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr3	8619600	8745036	chr3:8619600-8745036	0	-	8715692	8742522	789624	18	414,108,106,93,86,63,125,61,276,82,99,89,59,148,207,285,144,187,	0,3948,5941,6628,8097,10063,11204,12448,14065,15699,16158,39324,44143,57605,83425,96001,122858,125249,
#Partially deleted in new
chr3	8619610	8658966	chr3:8619610-8658966	0	-	8623515	8633938	789624	12	404,208,106,93,86,63,125,61,276,82,99,42,	0,3838,5931,6618,8087,10053,11194,12438,14055,15689,16148,39314,
#Partially deleted in new
chr3	8627654	8633715	chr3:8627654-8633715	0	-	8627654	8627654	8553170	6	129,110,63,125,61,50,	0,1613,2009,3150,4394,6011,
#Partially deleted in new
chr3	8630810	8644798	chr3:8630810-8644798	0	-	8630810	8644758	789624	6	119,61,130,82,99,68,	0,1238,2855,4489,4948,13920,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	8632075	8677352	chr3:8632075-8677352	0	-	8632075	8632075	8553170	5	34,130,82,99,147,	0,1590,3224,3683,45130,
#Partially deleted in new
chr3	8632080	8644798	chr3:8632080-8644798	0	-	8632080	8632080	8553170	5	29,276,82,99,68,	0,1585,3219,3678,12650,
#Partially deleted in new
chr3	8633880	8644794	chr3:8633880-8644794	0	-	8633880	8633880	8553170	5	115,82,99,122,64,	0,1419,1878,6067,10850,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	8663740	8682079	chr3:8663740-8682079	0	-	8663740	8663740	8553170	4	62,148,145,189,	0,13465,15964,18150,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	8663743	8677403	chr3:8663743-8677403	0	-	8663743	8663743	8553170	4	59,156,142,198,	0,7254,8150,13462,
#Deleted in new
chr3	8688142	8689159	chr3:8688142-8689159	5	+	8688142	8688142	16724991	1	1017,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	8690634	8745040	chr3:8690634-8745040	0	-	8690634	8690634	8553170	5	358,207,285,144,191,	0,12391,24967,51824,54215,
#Partially deleted in new
chr3	8733799	8746765	chr3:8733799-8746765	3	+	8733876	8745867	789624	2	191,1240,	0,11726,
#Partially deleted in new
chr3	8733835	8841808	chr3:8733835-8841808	0	+	8733835	8733835	8553170	3	155,60,465,	0,43641,107508,
#Partially deleted in new
chr3	8733865	8746756	chr3:8733865-8746756	1	+	8733876	8745867	789624	3	125,348,787,	0,11660,12104,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	8750407	8769617	chr3:8750407-8769617	3	-	8752976	8768187	789624	4	2817,1064,96,387,	0,16858,18088,18823,
#Deleted in new
chr3	8767911	8768677	chr3:8767911-8768677	0	-	8767911	8768187	789624	2	418,182,	0,584,
#Deleted in new
chr3	8768057	8769628	chr3:8768057-8769628	0	-	8768057	8768187	789624	3	272,96,375,	0,438,1196,
#Deleted in new
chr3	8768442	8769613	chr3:8768442-8769613	0	-	8768442	8768442	8553170	2	149,383,	0,788,
#Partially deleted in new
chr3	8775401	8902456	chr3:8775401-8902456	0	-	8775564	8902456	789624	4	263,63,154,77,	0,114987,123492,126978,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr3	8877075	8963502	chr3:8877075-8963502	3	-	8881356	8963385	0	13	4384,63,154,141,61,77,185,100,338,71,62,82,168,	0,13313,21818,25304,35236,36568,58795,62478,64391,70144,71433,81844,86259,
#Partially deleted in new
chr3	8881263	8963431	chr3:8881263-8963431	0	-	8912328	8963385	789624	12	196,63,154,141,61,185,100,338,71,62,82,97,	0,9125,17630,21116,31048,54607,58290,60203,65956,67245,77656,82071,
#Partially deleted in new
chr3	8881419	8912469	chr3:8881419-8912469	0	-	8881419	8881419	8553170	5	40,63,154,141,158,	0,8969,17474,20960,30892,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	8890108	8902398	chr3:8890108-8902398	0	-	8890384	8902398	789624	3	343,154,19,	0,8785,12271,
#Deleted in new
chr3	8931494	8931632	chr3:8931494-8931632	3	+	8931494	8931494	8553170	1	138,	0,
#Deleted in new
chr3	8931505	8931631	chr3:8931505-8931631	3	+	8931505	8931505	8553170	1	126,	0,
#Partially deleted in new
chr3	8941512	8963502	chr3:8941512-8963502	0	-	8941512	8941512	8553170	4	292,71,62,168,	0,5707,6996,21822,
#Partially deleted in new
chr3	8941530	8963470	chr3:8941530-8963470	1	-	8947261	8963385	789624	4	274,71,82,136,	0,5689,17389,21804,
#Partially deleted in new
chr3	8941550	8963470	chr3:8941550-8963470	1	-	8941666	8963385	789624	5	254,48,62,82,136,	0,5692,6958,17369,21784,
#Partially deleted in new
chr3	8941795	8963773	chr3:8941795-8963773	0	-	8941795	8963385	789624	6	9,71,62,82,259,98,	0,5424,6713,17124,21539,21880,
#Partially deleted in new
chr3	8946951	8963443	chr3:8946951-8963443	0	-	8946951	8946951	8553170	4	339,62,82,109,	0,1557,11968,16383,
#Partially deleted in new
chr3	8980590	9249379	chr3:8980590-9249379	3	-	8985518	9248951	789624	22	5342,328,150,181,80,228,106,135,78,61,103,28,85,198,102,222,129,186,63,163,193,495,	0,9921,12315,13752,29717,32717,33146,35006,44670,46344,52059,57472,66800,72436,75642,77660,79640,83805,99434,124089,144134,268294,
#Partially deleted in new
chr3	8980593	9249213	chr3:8980593-9249213	1	-	8985518	9248951	789624	22	5339,328,150,181,80,228,106,135,78,61,31,28,85,198,102,222,129,186,63,163,193,329,	0,9918,12312,13749,29714,32714,33143,35003,44667,46341,47506,57469,66797,72433,75639,77657,79637,83802,99431,124086,144131,268291,
#Deleted in new
chr3	8992627	8994454	chr3:8992627-8994454	0	-	8992627	8992627	8553170	2	428,112,	0,1715,
#Partially deleted in new
chr3	8993958	9010374	chr3:8993958-9010374	0	-	8993958	8993958	8553170	3	174,181,67,	0,384,16349,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	9006962	9013842	chr3:9006962-9013842	0	-	9006962	9006962	8553170	4	1385,80,228,106,	0,3345,6345,6774,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr3	9006978	9124977	chr3:9006978-9124977	1	-	9049424	9104742	789624	21	1369,80,228,106,100,135,78,61,31,103,28,85,209,198,102,222,129,186,63,163,253,	0,3329,6329,6758,7763,8618,18282,19956,21121,25671,31084,40412,42282,46048,49254,51272,53252,57417,73046,97701,117746,
#Partially deleted in new
chr3	9013419	9049354	chr3:9013419-9049354	0	-	9013419	9013419	8553170	8	116,106,135,78,61,28,85,94,	0,317,2177,11841,13515,24643,33971,35841,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	9014122	9015979	chr3:9014122-9015979	3	+	9014122	9014122	8553170	2	169,259,	0,1598,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr3	9014741	9216760	chr3:9014741-9216760	0	-	9014741	9014741	8553170	18	100,135,78,61,31,103,28,85,209,198,102,222,129,186,63,163,193,136,	0,855,10519,12193,13358,17908,23321,32649,34519,38285,41491,43509,45489,49654,65283,89938,109983,201883,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	9033430	9081287	chr3:9033430-9081287	0	-	9033430	9033430	8553170	9	4660,85,198,102,222,129,186,63,32,	0,13960,19596,22802,24820,26800,30965,46594,47825,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	9058737	9248991	chr3:9058737-9248991	0	-	9058737	9058737	8553170	6	1622,186,63,163,193,107,	0,5658,21287,45942,65987,190147,
#Partially deleted in new
chr3	9060230	9065530	chr3:9060230-9065530	0	-	9060230	9060230	8553170	3	129,186,237,	0,4165,5063,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	9192492	9193746	chr3:9192492-9193746	0	+	9192492	9192492	8553170	3	503,62,21,	0,936,1233,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	9192493	9193764	chr3:9192493-9193764	0	+	9192493	9192493	8553170	3	502,208,39,	0,789,1232,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	9192496	9194347	chr3:9192496-9194347	3	+	9192496	9192496	789624	3	499,173,622,	0,821,1229,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	9192502	9193764	chr3:9192502-9193764	0	+	9192502	9192502	8553170	3	493,116,39,	0,872,1223,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	9192534	9194453	chr3:9192534-9194453	0	+	9192534	9192534	789624	2	461,728,	0,1191,
#Partially deleted in new
chr3	9216894	9219508	chr3:9216894-9219508	3	+	9216894	9216894	789624	5	95,115,823,148,42,	0,467,836,2314,2572,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	9235521	9249685	chr3:9235521-9249685	0	-	9235521	9235521	8553170	2	753,801,	0,13363,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	9256758	9257507	chr3:9256758-9257507	3	+	9256758	9256758	8553170	2	242,135,	0,614,
#Partially deleted in new
chr3	9337601	9363303	chr3:9337601-9363303	0	-	9337601	9337601	8553170	2	76,464,	0,25238,
#Partially deleted in new
chr3	9348442	9349192	chr3:9348442-9349192	7	+	9348442	9348442	16724991	1	750,	0,
#Partially deleted in new
chr3	9349684	9362941	chr3:9349684-9362941	0	-	9349684	9349684	8553170	2	382,102,	0,13155,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	9349688	9396654	chr3:9349688-9396654	1	-	9349688	9349688	8553170	3	378,208,2667,	0,40601,44299,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	9362841	9385702	chr3:9362841-9385702	1	+	9365068	9384688	789624	10	286,305,78,477,131,70,116,111,124,1179,	0,2174,4066,8218,11674,14977,17661,20357,21370,21682,
#Partially deleted in new
chr3	9362970	9365190	chr3:9362970-9365190	0	+	9365068	9365190	789624	2	555,175,	0,2045,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	9363051	9386791	chr3:9363051-9386791	3	+	9365068	9384688	789624	10	281,305,78,477,131,70,116,111,124,2268,	0,1964,3856,8008,11464,14767,17451,20147,21160,21472,
#Partially deleted in new
chr3	9363097	9384870	chr3:9363097-9384870	1	+	9365068	9384688	789624	10	631,305,78,477,131,70,116,111,124,347,	0,1918,3810,7962,11418,14721,17405,20101,21114,21426,
#Partially deleted in new
chr3	9371159	9380632	chr3:9371159-9380632	0	+	9371159	9380622	789624	4	377,131,70,130,	0,3356,6659,9343,
#Partially deleted in new
chr3	9371232	9384660	chr3:9371232-9384660	0	+	9371232	9384660	789624	5	304,131,111,124,137,	0,3283,11966,12979,13291,
#Partially deleted in new
chr3	9371453	9380888	chr3:9371453-9380888	0	+	9371453	9371453	8553170	4	83,131,70,386,	0,3062,6365,9049,
#Partially deleted in new
chr3	9382915	9384376	chr3:9382915-9384376	0	+	9382915	9382915	8553170	2	394,165,	0,1296,
#Partially deleted in new
chr3	9383179	9384870	chr3:9383179-9384870	0	+	9383179	9383179	8553170	3	130,124,347,	0,1032,1344,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	9385794	9397428	chr3:9385794-9397428	1	-	9385794	9385794	8553170	5	129,41,218,400,5,	0,2292,4485,5632,11629,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	9385821	9396623	chr3:9385821-9396623	0	-	9385821	9385821	789624	4	102,41,208,64,	0,2265,4468,10738,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	9385835	9390619	chr3:9385835-9390619	0	-	9385835	9385835	8553170	3	88,41,330,	0,2251,4454,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	9388848	9397493	chr3:9388848-9397493	2	-	9388848	9388848	789624	3	1649,148,70,	0,2830,8575,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	9388882	9397495	chr3:9388882-9397495	1	-	9388882	9388882	8553170	3	1615,122,72,	0,2822,8541,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	9389510	9396605	chr3:9389510-9396605	0	-	9389510	9389510	8553170	3	286,218,46,	0,769,7049,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	9389914	9391822	chr3:9389914-9391822	0	-	9389914	9389914	8553170	2	583,396,	0,1512,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	9391311	9397504	chr3:9391311-9397504	0	-	9391311	9391311	8553170	3	515,74,81,	0,4194,6112,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	9391346	9398367	chr3:9391346-9398367	0	-	9391346	9391346	8553170	2	480,69,	0,6952,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	9391364	9397032	chr3:9391364-9397032	0	-	9391364	9391364	8553170	2	462,31,	0,5637,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	9391380	9396624	chr3:9391380-9396624	0	-	9391380	9391380	8553170	2	446,65,	0,5179,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	9391719	9396658	chr3:9391719-9396658	0	-	9391719	9391719	8553170	2	107,2484,	0,2455,
#Partially deleted in new
chr3	9397614	9440698	chr3:9397614-9440698	0	+	9428938	9429914	789624	10	363,60,187,225,193,106,209,59,179,243,	0,26852,31208,32212,35755,36230,36662,37209,38113,42841,
#Partially deleted in new
chr3	9397718	9478154	chr3:9397718-9478154	3	+	9428938	9476091	789624	23	259,60,187,106,152,59,179,243,149,118,110,253,84,258,321,243,130,248,471,302,134,89,2672,	0,26748,31104,36126,36615,37105,38009,42737,43874,44409,45589,47329,47938,49331,49967,50669,56020,66706,72740,75517,76730,77349,77764,
#Partially deleted in new
chr3	9397718	9435825	chr3:9397718-9435825	0	+	9428938	9435825	789624	7	259,60,187,106,152,59,98,	0,26748,31104,36126,36615,37105,38009,
#Partially deleted in new
chr3	9397855	9429325	chr3:9397855-9429325	0	+	9397855	9397855	8553170	3	122,60,503,	0,26611,30967,
#Partially deleted in new
chr3	9397862	9433397	chr3:9397862-9433397	0	+	9397862	9397862	8553170	5	115,60,87,187,28,	0,26604,28226,30960,35507,
#Partially deleted in new
chr3	9397872	9433878	chr3:9397872-9433878	0	+	9428938	9433496	789624	5	105,60,187,193,34,	0,26594,30950,35497,35972,
#Partially deleted in new
chr3	9397899	9464753	chr3:9397899-9464753	0	+	9428938	9429914	789624	20	78,60,187,225,106,137,209,59,179,243,149,118,110,253,84,258,321,243,130,329,	0,26567,30923,31927,35945,36145,36377,36924,37828,42556,43693,44228,45408,47148,47757,49150,49786,50488,55839,66525,
#Partially deleted in new
chr3	9397903	9478154	chr3:9397903-9478154	1	+	9428938	9476091	789624	22	74,187,106,152,59,179,243,149,118,110,253,84,258,321,243,130,248,471,302,134,89,2672,	0,30919,35941,36430,36920,37824,42552,43689,44224,45404,47144,47753,49146,49782,50484,55835,66521,72555,75332,76545,77164,77579,
#Partially deleted in new
chr3	9423210	9429008	chr3:9423210-9429008	0	+	9423210	9423210	8553170	3	47,60,186,	0,1256,5612,
#Partially deleted in new
chr3	9428924	9478154	chr3:9428924-9478154	1	+	9428938	9476091	789624	21	85,106,209,59,179,243,149,118,110,253,84,258,321,243,130,248,471,302,134,89,2672,	0,4920,5352,5899,6803,11531,12668,13203,14383,16123,16732,18125,18761,19463,24814,35500,41534,44311,45524,46143,46558,
#Partially deleted in new
chr3	9429924	9441626	chr3:9429924-9441626	0	+	9434827	9441626	789624	7	127,106,152,59,179,243,34,	0,3920,4409,4899,5803,10531,11668,
#Partially deleted in new
chr3	9429949	9476478	chr3:9429949-9476478	1	+	9434827	9476091	789624	22	102,106,152,59,179,39,243,149,118,110,253,84,258,321,243,130,248,471,302,134,89,996,	0,3895,4384,4874,5778,6900,10506,11643,12178,13358,15098,15707,17100,17736,18438,23789,34475,40509,43286,44499,45118,45533,
#Deleted in new
chr3	9429972	9431876	chr3:9429972-9431876	0	+	9429972	9429972	8553170	2	79,169,	0,1735,
#Partially deleted in new
chr3	9433484	9440507	chr3:9433484-9440507	0	+	9433484	9433484	8553170	7	78,106,152,41,59,179,52,	0,360,849,1105,1339,2243,6971,
#Partially deleted in new
chr3	9433992	9476459	chr3:9433992-9476459	0	+	9433992	9433992	8553170	19	493,59,179,243,149,118,110,253,84,258,321,243,130,248,471,302,134,89,977,	0,831,1735,6463,7600,8135,9315,11055,11664,13057,13693,14395,19746,30432,36466,39243,40456,41075,41490,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	9442166	9479240	chr3:9442166-9479240	0	+	9442166	9478612	789624	14	79,110,253,84,258,321,243,130,248,471,302,134,89,640,	0,1141,2881,3490,4883,5519,6221,11572,22258,28292,31069,32282,32901,36434,
#Partially deleted in new
chr3	9442169	9476154	chr3:9442169-9476154	0	+	9442169	9445712	789624	14	76,110,253,121,258,321,243,130,248,471,302,134,89,672,	0,1138,2878,3450,4880,5516,6218,11569,22255,28289,31066,32279,32898,33313,
#Partially deleted in new
chr3	9442169	9445732	chr3:9442169-9445732	0	+	9442169	9442169	8553170	4	76,110,253,113,	0,1138,2878,3450,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr3	9442889	9476459	chr3:9442889-9476459	0	+	9442889	9442889	8553170	13	528,253,84,258,321,243,130,248,471,302,134,89,977,	0,2158,2767,4160,4796,5498,10849,21535,27569,30346,31559,32178,32593,
#Partially deleted in new
chr3	9445438	9447718	chr3:9445438-9447718	0	+	9445438	9445438	8553170	3	302,258,33,	0,1611,2247,
#Partially deleted in new
chr3	9447686	9464954	chr3:9447686-9464954	0	+	9447686	9447686	8553170	5	320,243,130,97,530,	0,701,6052,6318,16738,
#Partially deleted in new
chr3	9447969	9473372	chr3:9447969-9473372	0	+	9447969	9473372	789624	7	37,243,130,248,57,471,137,	0,418,5769,16455,20549,22489,25266,
#Partially deleted in new
chr3	9448474	9464810	chr3:9448474-9464810	0	+	9448474	9448474	8553170	3	156,130,386,	0,5264,15950,
#Partially deleted in new
chr3	9448558	9464693	chr3:9448558-9464693	0	+	9448558	9448558	8553170	4	72,113,130,269,	0,921,5180,15866,
#Partially deleted in new
chr3	9470666	9474769	chr3:9470666-9474769	0	+	9470666	9470666	8553170	3	263,302,321,	0,2569,3782,
#Deleted in new
chr3	9473235	9475265	chr3:9473235-9475265	0	+	9473235	9473235	8553170	3	302,134,198,	0,1213,1832,
#Deleted in new
chr3	9473394	9475705	chr3:9473394-9475705	0	+	9473394	9473394	8553170	3	143,708,223,	0,1054,2088,
#Deleted in new
chr3	9473422	9474971	chr3:9473422-9474971	0	+	9473422	9473422	8553170	3	115,134,178,	0,1026,1371,
#Deleted in new
chr3	9475049	9475659	chr3:9475049-9475659	0	+	9475049	9475049	8553170	2	107,177,	0,433,
#Partially deleted in new
chr3	9498360	9553802	chr3:9498360-9553802	3	-	9502210	9552679	789624	4	3951,237,574,118,	0,7606,53913,55324,
#Partially deleted in new
chr3	9550611	9552307	chr3:9550611-9552307	0	-	9550611	9550611	8553170	2	449,34,	0,1662,
#Partially deleted in new
chr3	9552571	9553795	chr3:9552571-9553795	0	-	9552571	9552571	8553170	2	191,111,	0,1113,
#Partially deleted in new
chr3	9600747	9602728	chr3:9600747-9602728	7	+	9600747	9600747	16724991	3	360,253,420,	0,966,1561,
#Partially deleted in new
chr3	9649432	9702393	chr3:9649432-9702393	1	+	9649583	9701973	789624	18	310,149,109,76,61,123,74,71,75,67,86,77,37,71,59,139,180,604,	0,4188,12834,19286,19999,21615,23252,27884,28551,33745,35152,35455,35778,38388,39263,39511,40531,52357,
#Partially deleted in new
chr3	9649449	9702387	chr3:9649449-9702387	1	+	9649583	9701973	789624	9	293,67,86,77,37,71,59,139,598,	0,33728,35135,35438,35761,38371,39246,39494,52340,
#Partially deleted in new
chr3	9649461	9702392	chr3:9649461-9702392	3	+	9649583	9701973	789624	19	281,149,109,76,61,123,74,71,75,67,86,77,37,71,59,139,180,156,603,	0,4159,12805,19257,19970,21586,23223,27855,28522,33716,35123,35426,35749,38359,39234,39482,40502,48249,52328,
#Partially deleted in new
chr3	9649472	9702216	chr3:9649472-9702216	0	+	9649583	9683236	789624	12	270,149,123,74,67,86,77,37,59,139,156,427,	0,4148,21575,23212,33705,35112,35415,35738,39223,39471,48238,52317,
#Partially deleted in new
chr3	9649504	9683728	chr3:9649504-9683728	0	+	9649583	9671136	789624	9	238,149,109,61,123,74,71,75,551,	0,4116,12762,19927,21543,23180,27812,28479,33673,
#Partially deleted in new
chr3	9649511	9702389	chr3:9649511-9702389	1	+	9649583	9701973	789624	17	231,149,109,76,61,123,74,71,75,67,86,77,37,71,59,139,600,	0,4109,12755,19207,19920,21536,23173,27805,28472,33666,35073,35376,35699,38309,39184,39432,52278,
#Partially deleted in new
chr3	9649514	9683217	chr3:9649514-9683217	0	+	9649583	9671136	789624	9	228,149,19,61,123,74,71,75,40,	0,4106,12752,19917,21533,23170,27802,28469,33663,
#Partially deleted in new
chr3	9649518	9668752	chr3:9649518-9668752	0	+	9649583	9650384	789624	5	224,202,149,109,34,	0,809,4102,12748,19200,
#Partially deleted in new
chr3	9649608	9653873	chr3:9649608-9653873	0	+	9649608	9649608	8553170	2	134,253,	0,4012,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	9659625	9678058	chr3:9659625-9678058	0	+	9659721	9662289	789624	8	184,109,76,61,123,74,71,75,	0,2641,9093,9806,11422,13059,17691,18358,
#Partially deleted in new
chr3	9668742	9702387	chr3:9668742-9702387	0	+	9668761	9671136	789624	15	52,61,123,74,71,75,67,86,77,37,71,59,139,156,598,	0,689,2305,3942,8574,9241,14435,15842,16145,16468,19078,19953,20201,28968,33047,
#Partially deleted in new
chr3	9675513	9685229	chr3:9675513-9685229	0	+	9675604	9685229	789624	7	158,71,75,67,86,77,19,	0,1803,2470,7664,9071,9374,9697,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	9699426	9702392	chr3:9699426-9702392	0	+	9699426	9699426	8553170	1	2966,	0,
#Partially deleted in new
chr3	9703806	9729908	chr3:9703806-9729908	3	+	9703996	9729692	789624	21	258,41,47,104,37,3,77,64,104,105,42,76,54,62,47,182,128,103,58,74,402,	0,780,942,1084,1657,1911,2180,8734,8918,9168,11107,11482,11666,12167,13251,14222,14668,22142,22858,23306,25700,
#Partially deleted in new
chr3	9703825	9727450	chr3:9703825-9727450	1	+	9703996	9727382	789624	21	239,41,47,104,37,3,77,64,104,105,42,76,54,62,47,182,128,103,58,74,104,	0,761,923,1065,1638,1892,2161,8715,8899,9149,11088,11463,11647,12148,13232,14203,14649,22123,22839,23287,23521,
#Partially deleted in new
chr3	9703825	9727441	chr3:9703825-9727441	1	+	9703996	9727382	789624	20	239,41,47,104,38,79,64,104,105,42,76,54,62,47,182,128,103,58,74,95,	0,761,923,1065,1638,2159,8715,8899,9149,11088,11463,11647,12148,13232,14203,14649,22123,22839,23287,23521,
#Deleted in new
chr3	9703832	9705033	chr3:9703832-9705033	0	+	9703832	9703832	8553170	3	232,209,143,	0,754,1058,
#Partially deleted in new
chr3	9715339	9726713	chr3:9715339-9726713	0	+	9715339	9726713	789624	7	25,54,47,182,128,103,49,	0,133,1718,2689,3135,10609,11325,
#Partially deleted in new
chr3	9731728	9747873	chr3:9731728-9747873	1	+	9734140	9747349	0	13	410,609,960,163,132,129,310,324,148,137,119,155,708,	0,2402,7270,9050,9579,10296,11215,11849,13279,13844,14083,14571,15437,
#Partially deleted in new
chr3	9731744	9748018	chr3:9731744-9748018	1	+	9734140	9747349	0	14	394,609,960,163,132,147,310,324,285,148,137,119,155,853,	0,2386,7254,9034,9563,10280,11199,11833,12479,13263,13828,14067,14555,15421,
#Partially deleted in new
chr3	9731744	9748015	chr3:9731744-9748015	1	+	9734140	9747349	0	14	394,609,960,163,132,129,310,321,285,148,137,119,155,850,	0,2386,7254,9034,9563,10280,11199,11836,12479,13263,13828,14067,14555,15421,
#Deleted in new
chr3	9731787	9734441	chr3:9731787-9734441	0	+	9734140	9734441	789624	3	351,198,311,	0,1385,2343,
#Deleted in new
chr3	9732479	9734456	chr3:9732479-9734456	0	+	9734140	9734456	789624	2	208,326,	0,1651,
#Partially deleted in new
chr3	9734129	9748001	chr3:9734129-9748001	3	+	9734140	9747349	0	13	610,960,163,132,129,310,324,285,148,137,119,155,836,	0,4869,6649,7178,7895,8814,9448,10094,10878,11443,11682,12170,13036,
#Deleted in new
chr3	9743255	9743795	chr3:9743255-9743795	0	+	9743255	9743255	8553170	2	216,215,	0,325,
#Deleted in new
chr3	9745043	9747229	chr3:9745043-9747229	0	+	9745043	9745043	8553170	4	112,358,155,64,	0,529,1256,2122,
#Partially deleted in new
chr3	9749943	9757407	chr3:9749943-9757407	1	+	9750286	9757328	0	7	480,248,180,182,151,50,364,	0,1001,1826,4760,6527,6823,7100,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	9749943	9766737	chr3:9749943-9766737	3	+	9750286	9766135	0	7	480,248,180,182,151,50,929,	0,1001,1826,4760,6527,6823,15865,
#Partially deleted in new
chr3	9749943	9757513	chr3:9749943-9757513	1	+	9750286	9757150	0	7	480,248,180,182,151,50,453,	0,1001,1826,4760,6527,6823,7117,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	9749943	9766668	chr3:9749943-9766668	1	+	9750286	9766135	0	5	480,248,180,182,860,	0,1001,1826,4760,15865,
#Partially deleted in new
chr3	9749980	9757377	chr3:9749980-9757377	1	+	9750286	9756843	0	6	443,248,180,182,151,611,	0,964,1789,4723,6490,6786,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	9750017	9751072	chr3:9750017-9751072	0	+	9750017	9750017	8553170	2	406,408,	0,647,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	9750071	9766540	chr3:9750071-9766540	1	+	9750286	9759254	0	8	352,248,180,182,151,50,53,732,	0,873,1698,4632,6399,6695,9162,15737,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	9750072	9766737	chr3:9750072-9766737	1	+	9750286	9765831	0	8	351,248,180,182,151,50,100,929,	0,872,1697,4631,6398,6694,9114,15736,
#Partially deleted in new
chr3	9750082	9757204	chr3:9750082-9757204	0	+	9750286	9756492	789624	3	341,151,438,	0,6388,6684,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	9750086	9766112	chr3:9750086-9766112	1	+	9750286	9765831	0	4	337,248,180,304,	0,858,1683,15722,
#Partially deleted in new
chr3	9750345	9757035	chr3:9750345-9757035	0	+	9750345	9756843	789624	5	78,180,182,151,269,	0,1424,4358,6125,6421,
#Partially deleted in new
chr3	9750354	9756865	chr3:9750354-9756865	0	+	9750354	9756478	789624	5	69,248,180,151,99,	0,590,1415,6116,6412,
#Deleted in new
chr3	9750963	9752094	chr3:9750963-9752094	0	+	9750963	9750963	8553170	2	229,325,	0,806,
#Partially deleted in new
chr3	9751078	9788219	chr3:9751078-9788219	0	+	9751078	9787731	789624	4	114,180,88,492,	0,691,30434,36649,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	9751091	9766737	chr3:9751091-9766737	0	+	9751091	9766135	789624	4	101,180,182,929,	0,678,3612,14717,
#Partially deleted in new
chr3	9751902	9757191	chr3:9751902-9757191	0	+	9751902	9751902	8553170	2	47,425,	0,4864,
#Partially deleted in new
chr3	9751902	9757191	chr3:9751902-9757191	0	+	9751902	9757191	789624	4	47,151,50,148,	0,4568,4864,5141,
#Partially deleted in new
chr3	9757341	9769977	chr3:9757341-9769977	3	-	9757538	9767749	0	12	280,118,88,79,113,76,127,139,75,132,115,146,	0,387,2146,2330,3314,4119,4289,5572,5797,8417,10325,12490,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	9757346	9760570	chr3:9757346-9760570	0	-	9757346	9757346	8553170	3	500,88,899,	0,2141,2325,
#Partially deleted in new
chr3	9757347	9761725	chr3:9757347-9761725	0	-	9757516	9761725	789624	6	499,88,79,113,76,95,	0,2140,2324,3308,4113,4283,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	9757347	9762324	chr3:9757347-9762324	0	+	9757347	9757347	8553170	1	4977,	0,
#Deleted in new
chr3	9757353	9758047	chr3:9757353-9758047	0	-	9757353	9757353	8553170	2	268,319,	0,375,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	9757391	9769961	chr3:9757391-9769961	0	-	9766176	9767749	789624	12	230,118,79,113,76,127,139,75,132,89,115,130,	0,337,2280,3264,4069,4239,5522,5747,8367,8733,10275,12440,
#Partially deleted in new
chr3	9761687	9769992	chr3:9761687-9769992	0	-	9761687	9767749	789624	5	70,139,75,115,161,	0,1226,1451,5979,8144,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	9779859	9792747	chr3:9779859-9792747	3	-	9780356	9791466	789624	9	690,186,110,104,142,106,251,234,532,	0,4168,5456,7146,7339,9649,9853,11400,12356,
#Partially deleted in new
chr3	9779966	9788083	chr3:9779966-9788083	0	-	9779966	9779966	8553170	5	583,186,110,104,885,	0,4061,5349,7039,7232,
#Partially deleted in new
chr3	9780255	9793011	chr3:9780255-9793011	1	-	9780356	9791466	789624	9	294,186,110,104,142,106,251,234,190,	0,3772,5060,6750,6943,9253,9457,11004,12566,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	9783127	9792736	chr3:9783127-9792736	1	-	9784023	9791466	789624	8	1086,110,104,142,106,251,234,521,	0,2188,3878,4071,6381,6585,8132,9088,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	9789702	9792408	chr3:9789702-9792408	0	-	9789702	9789702	8553170	3	261,122,193,	0,1557,2513,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	9789884	9792783	chr3:9789884-9792783	0	-	9789884	9791466	789624	3	79,226,568,	0,1375,2331,
#Partially deleted in new
chr3	9792494	9806442	chr3:9792494-9806442	1	+	9801696	9806215	789624	6	211,119,112,96,171,233,	0,5164,7690,9166,11348,13715,
#Partially deleted in new
chr3	9792557	9807726	chr3:9792557-9807726	3	+	9793121	9806215	789624	6	567,119,112,96,171,1517,	0,5101,7627,9103,11285,13652,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	9793081	9806436	chr3:9793081-9806436	0	+	9793121	9799891	789624	7	43,119,189,112,96,171,227,	0,4577,6797,7103,8579,10761,13128,
#Partially deleted in new
chr3	9793081	9813071	chr3:9793081-9813071	0	+	9793121	9803864	789624	5	43,119,171,89,129,	0,4577,10761,17539,19861,
#Partially deleted in new
chr3	9793081	9813351	chr3:9793081-9813351	0	+	9793121	9810665	789624	8	43,119,112,96,171,89,169,104,	0,4577,7103,8579,10761,17539,19861,20166,
#Partially deleted in new
chr3	9793081	9798121	chr3:9793081-9798121	0	+	9793081	9793081	8553170	2	43,463,	0,4577,
#Partially deleted in new
chr3	9793092	9806417	chr3:9793092-9806417	0	+	9793121	9803547	789624	7	32,119,112,96,172,171,208,	0,4566,7092,8568,10443,10750,13117,
#Partially deleted in new
chr3	9793094	9804214	chr3:9793094-9804214	0	+	9793094	9793094	8553170	5	30,119,112,96,372,	0,4564,7090,8566,10748,
#Partially deleted in new
chr3	9793095	9804013	chr3:9793095-9804013	0	+	9801696	9804013	789624	5	79,119,112,96,171,	0,4563,7089,8565,10747,
#Partially deleted in new
chr3	9793113	9835401	chr3:9793113-9835401	3	+	9793121	9834821	789624	12	11,119,112,96,169,98,115,196,149,244,436,721,	0,4545,7071,8547,19829,20134,24531,27432,32686,33883,35846,41567,
#Partially deleted in new
chr3	9793116	9806572	chr3:9793116-9806572	1	+	9793121	9806215	789624	6	65,119,112,96,171,363,	0,4542,7068,8544,10726,13093,
#Partially deleted in new
chr3	9797657	9813038	chr3:9797657-9813038	0	+	9797657	9813038	789624	4	120,112,171,96,	0,2527,6185,15285,
#Partially deleted in new
chr3	9808085	9816094	chr3:9808085-9816094	0	+	9810661	9816094	789624	6	53,119,89,169,98,21,	0,453,2535,4857,5162,7988,
#Partially deleted in new
chr3	9808516	9816179	chr3:9808516-9816179	0	+	9810661	9816179	789624	5	141,89,169,98,106,	0,2104,4426,4731,7557,
#Partially deleted in new
chr3	9809699	9817656	chr3:9809699-9817656	0	+	9810661	9817656	789624	5	223,89,169,98,12,	0,921,3243,3548,7945,
#Partially deleted in new
chr3	9809720	9818871	chr3:9809720-9818871	0	+	9810661	9818871	789624	6	44,89,169,98,115,50,	0,900,3222,3527,7924,9101,
#Partially deleted in new
chr3	9809720	9817658	chr3:9809720-9817658	0	+	9810661	9817658	789624	6	44,89,166,98,129,14,	0,900,3225,3527,6353,7924,
#Partially deleted in new
chr3	9809720	9817799	chr3:9809720-9817799	0	+	9809720	9809720	8553170	5	44,89,169,98,155,	0,900,3222,3527,7924,
#Partially deleted in new
chr3	9809739	9816125	chr3:9809739-9816125	0	+	9810661	9816125	789624	5	132,89,169,98,52,	0,881,3203,3508,6334,
#Partially deleted in new
chr3	9809739	9816105	chr3:9809739-9816105	0	+	9810661	9816105	789624	5	109,89,169,98,32,	0,881,3203,3508,6334,
#Partially deleted in new
chr3	9809873	9816204	chr3:9809873-9816204	0	+	9810661	9816204	789624	5	49,89,169,98,131,	0,747,3069,3374,6200,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	9809934	9835404	chr3:9809934-9835404	0	+	9810661	9818607	789624	11	775,169,98,129,115,366,196,149,76,436,724,	0,3008,3313,6139,7710,8620,10611,15865,17062,19025,24746,
#Partially deleted in new
chr3	9809987	9835489	chr3:9809987-9835489	3	+	9810006	9835489	789624	13	407,89,169,98,115,99,196,149,244,436,142,227,396,	0,633,2955,3260,7657,8834,10558,15812,17009,18972,23116,24693,25106,
#Partially deleted in new
chr3	9810246	9817767	chr3:9810246-9817767	0	+	9810661	9817767	789624	6	148,89,169,98,129,123,	0,374,2696,3001,5827,7398,
#Partially deleted in new
chr3	9810246	9829252	chr3:9810246-9829252	0	+	9810661	9827032	789624	6	148,89,169,98,244,293,	0,374,2696,3001,16750,18713,
#Partially deleted in new
chr3	9810601	9818921	chr3:9810601-9818921	0	+	9810661	9818921	789624	5	108,169,98,70,100,	0,2341,2646,7088,8220,
#Partially deleted in new
chr3	9810669	9835404	chr3:9810669-9835404	0	+	9810669	9825847	789624	8	40,169,98,149,244,436,227,311,	0,2273,2578,15130,16327,18290,24011,24424,
#Partially deleted in new
chr3	9812761	9813097	chr3:9812761-9813097	3	-	9812761	9812761	8553170	1	336,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	9813247	9836315	chr3:9813247-9836315	0	+	9813247	9813247	8553170	8	98,1276,196,149,244,436,142,1635,	0,4397,7298,12552,13749,15712,19856,21433,
#Partially deleted in new
chr3	9813293	9834821	chr3:9813293-9834821	0	+	9813293	9834821	789624	9	52,129,115,99,196,149,244,436,141,	0,2780,4351,5528,7252,12506,13703,15666,21387,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	9813302	9835403	chr3:9813302-9835403	0	+	9813302	9813302	8553170	12	43,129,3097,149,244,71,76,717,142,77,227,310,	0,2771,4342,12497,13694,15006,15197,15376,19801,21124,21378,21791,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	9813306	9820647	chr3:9813306-9820647	0	+	9813306	9818599	789624	3	39,366,102,	0,5248,7239,
#Partially deleted in new
chr3	9813308	9825901	chr3:9813308-9825901	0	+	9813308	9825901	789624	5	37,129,115,196,102,	0,2765,4336,7237,12491,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	9813308	9820616	chr3:9813308-9820616	0	+	9813308	9818599	789624	4	37,129,366,71,	0,2765,5246,7237,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	9816073	9835096	chr3:9816073-9835096	0	+	9816073	9834925	789624	10	129,115,99,196,149,244,436,170,77,416,	0,1571,2748,4472,9726,10923,12886,17030,18353,18607,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	9818371	9836315	chr3:9818371-9836315	1	+	9820652	9834821	789624	5	2370,149,244,436,1635,	0,7428,8625,10588,16309,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	9818560	9835404	chr3:9818560-9835404	0	+	9820652	9827227	789624	8	2181,149,76,26,436,142,77,724,	0,7239,8436,8654,10399,14543,15866,16120,
#Partially deleted in new
chr3	9819302	9855138	chr3:9819302-9855138	1	+	9820652	9854621	789624	5	1439,149,244,436,580,	0,6497,7694,9657,35256,
#Partially deleted in new
chr3	9820293	9835358	chr3:9820293-9835358	1	+	9820652	9834925	789624	6	448,149,244,436,142,678,	0,5506,6703,8666,12810,14387,
#Partially deleted in new
chr3	9820293	9835332	chr3:9820293-9835332	0	+	9820652	9834821	789624	6	448,149,244,436,227,239,	0,5506,6703,8666,14387,14800,
#Deleted in new
chr3	9820348	9821041	chr3:9820348-9821041	0	+	9820348	9820348	8553170	1	693,	0,
#Partially deleted in new
chr3	9825405	9829054	chr3:9825405-9829054	0	+	9825405	9825405	8553170	3	543,244,95,	0,1591,3554,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	9825565	9828162	chr3:9825565-9828162	0	+	9825565	9825565	8553170	2	383,1166,	0,1431,
#Partially deleted in new
chr3	9825860	9829335	chr3:9825860-9829335	0	+	9825860	9825860	8553170	3	88,152,376,	0,1136,3099,
#Partially deleted in new
chr3	9829162	9835403	chr3:9829162-9835403	0	+	9829162	9835403	789624	2	233,310,	0,5931,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	9834083	9835208	chr3:9834083-9835208	0	+	9834083	9834083	8553170	3	420,227,115,	0,597,1010,
#Partially deleted in new
chr3	9837848	9844016	chr3:9837848-9844016	3	-	9838015	9844014	789624	9	359,140,124,85,108,100,45,137,127,	0,1183,2335,2683,2849,4134,4350,5616,6041,
#Partially deleted in new
chr3	9837848	9840617	chr3:9837848-9840617	0	-	9838170	9840617	789624	4	359,187,124,86,	0,1136,2335,2683,
#Partially deleted in new
chr3	9837848	9844014	chr3:9837848-9844014	1	-	9838015	9844014	789624	8	359,140,124,85,108,100,137,125,	0,1183,2335,2683,2849,4134,5616,6041,
#Partially deleted in new
chr3	9837881	9840866	chr3:9837881-9840866	0	-	9837881	9837881	8553170	3	326,140,683,	0,1150,2302,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	9837893	9839713	chr3:9837893-9839713	0	-	9837893	9837893	8553170	2	314,682,	0,1138,
#Partially deleted in new
chr3	9838019	9843942	chr3:9838019-9843942	1	-	9838196	9843753	789624	8	188,124,85,108,100,45,137,218,	0,2164,2512,2678,3963,4179,5445,5705,
#Partially deleted in new
chr3	9838164	9843986	chr3:9838164-9843986	0	-	9839053	9843986	789624	9	43,140,152,85,108,100,45,137,97,	0,867,2019,2367,2533,3818,4034,5300,5725,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	9839900	9843571	chr3:9839900-9843571	0	-	9839900	9839900	8553170	3	716,108,1589,	0,797,2082,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	9839900	9844016	chr3:9839900-9844016	0	-	9839900	9839900	8553170	4	2182,45,137,127,	0,2298,3564,3989,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	9839940	9844002	chr3:9839940-9844002	0	-	9840154	9844002	789624	7	367,85,108,100,45,137,113,	0,591,757,2042,2258,3524,3949,
#Partially deleted in new
chr3	9840681	9844018	chr3:9840681-9844018	0	-	9840681	9840681	8553170	4	124,100,45,554,	0,1301,1517,2783,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	9841256	9844059	chr3:9841256-9844059	0	-	9841978	9844059	789624	4	826,45,137,170,	0,942,2208,2633,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	9841407	9843976	chr3:9841407-9843976	0	-	9841907	9843976	789624	3	675,45,87,	0,791,2482,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	9841697	9843995	chr3:9841697-9843995	0	-	9843885	9843995	789624	2	546,271,	0,2027,
#Partially deleted in new
chr3	9841853	9843737	chr3:9841853-9843737	0	-	9841853	9841853	8553170	3	229,45,273,	0,345,1611,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	9843150	9844016	chr3:9843150-9844016	0	-	9843150	9843150	8553170	2	451,127,	0,739,
#Partially deleted in new
chr3	9866710	9878812	chr3:9866710-9878812	1	-	9867133	9878792	789624	6	586,188,159,154,78,34,	0,3171,3453,10355,11723,12068,
#Partially deleted in new
chr3	9866710	9880254	chr3:9866710-9880254	1	-	9867133	9878486	789624	7	586,188,159,30,154,78,31,	0,3171,3453,3734,10355,11723,13513,
#Partially deleted in new
chr3	9866713	9879056	chr3:9866713-9879056	3	-	9867133	9878486	789624	6	583,188,159,154,78,115,	0,3168,3450,10352,11720,12228,
#Partially deleted in new
chr3	9866713	9880251	chr3:9866713-9880251	1	-	9867133	9870307	789624	5	583,188,159,78,28,	0,3168,3450,11720,13510,
#Partially deleted in new
chr3	9866713	9879056	chr3:9866713-9879056	1	-	9867133	9870307	789624	5	583,188,159,78,115,	0,3168,3450,11720,12228,
#Partially deleted in new
chr3	9867028	9878511	chr3:9867028-9878511	1	-	9867133	9878486	789624	6	268,188,159,30,154,78,	0,2853,3135,3416,10037,11405,
#Partially deleted in new
chr3	9867062	9878488	chr3:9867062-9878488	1	-	9867101	9878486	789624	3	234,154,55,	0,10003,11371,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	9877882	9880254	chr3:9877882-9880254	0	-	9877882	9877882	8553170	2	629,31,	0,2341,
#Partially deleted in new
chr3	9890571	9894349	chr3:9890571-9894349	3	+	9890722	9893377	789624	2	240,1435,	0,2343,
#Partially deleted in new
chr3	9890573	9893883	chr3:9890573-9893883	1	+	9890722	9892872	8553170	2	238,1075,	0,2235,
#Partially deleted in new
chr3	9890609	9894349	chr3:9890609-9894349	1	+	9890722	9893377	8553170	2	202,1435,	0,2305,
#Deleted in new
chr3	9902611	9903380	chr3:9902611-9903380	0	+	9902611	9902611	8553170	2	81,491,	0,278,
#Partially deleted in new
chr3	9902618	9915844	chr3:9902618-9915844	1	+	9902636	9915807	789624	17	74,175,16,120,98,160,140,69,67,176,48,46,155,69,52,99,594,	0,271,778,1413,3745,4087,4342,5620,6598,8246,8508,8636,8824,11337,11929,12060,12632,
#Partially deleted in new
chr3	9902827	9916402	chr3:9902827-9916402	3	+	9902932	9915807	789624	16	237,16,120,98,160,140,69,67,176,48,46,155,69,52,99,1152,	0,569,1204,3536,3878,4133,5411,6389,8037,8299,8427,8615,11128,11720,11851,12423,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	9902830	9910390	chr3:9902830-9910390	0	+	9902830	9902830	8553170	8	234,16,120,98,160,140,69,1174,	0,566,1201,3533,3875,4130,5408,6386,
#Partially deleted in new
chr3	9902847	9916395	chr3:9902847-9916395	0	+	9902932	9907011	789624	14	217,98,160,140,69,67,176,48,46,155,69,52,99,1145,	0,3516,3858,4113,5391,6369,8017,8279,8407,8595,11108,11700,11831,12403,
#Partially deleted in new
chr3	9902847	9911538	chr3:9902847-9911538	0	+	9902932	9910936	789624	8	217,160,140,69,176,48,46,96,	0,3858,4113,5391,8017,8279,8407,8595,
#Partially deleted in new
chr3	9902847	9916402	chr3:9902847-9916402	1	+	9902932	9915332	789624	16	217,16,120,98,160,140,69,67,176,48,46,155,69,125,99,1152,	0,549,1184,3516,3858,4113,5391,6369,8017,8279,8407,8595,11108,11627,11831,12403,
#Partially deleted in new
chr3	9902849	9916398	chr3:9902849-9916398	0	+	9902932	9907011	789624	15	215,120,98,160,140,69,67,176,48,46,155,69,198,99,1148,	0,1182,3514,3856,4111,5389,6367,8015,8277,8405,8593,11106,11552,11829,12401,
#Partially deleted in new
chr3	9902881	9907074	chr3:9902881-9907074	0	+	9902932	9907074	789624	5	183,16,98,160,114,	0,515,3482,3824,4079,
#Deleted in new
chr3	9910864	9911405	chr3:9910864-9911405	0	+	9910864	9910864	8553170	3	176,48,151,	0,262,390,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	9911256	9911814	chr3:9911256-9911814	0	+	9911256	9911256	8553170	2	44,372,	0,186,
#Partially deleted in new
chr3	9917073	9933621	chr3:9917073-9933621	3	+	9917315	9933593	789624	18	347,22,153,75,110,112,140,60,55,182,51,46,122,60,49,96,39,669,	0,639,849,1261,1426,3417,6807,7158,11092,11231,11506,12778,12954,13326,13821,15534,15746,15879,
#Partially deleted in new
chr3	9917073	9933620	chr3:9917073-9933620	1	+	9917315	9933593	789624	17	347,22,153,75,110,112,45,140,60,55,182,46,122,60,49,96,668,	0,639,849,1261,1426,3417,3851,6807,7158,11092,11231,12778,12954,13326,13821,15534,15879,
#Partially deleted in new
chr3	9917097	9933620	chr3:9917097-9933620	1	+	9917315	9933593	789624	19	536,22,153,75,110,112,45,140,60,55,182,51,46,122,60,49,96,39,668,	0,615,825,1237,1402,3393,3827,6783,7134,11068,11207,11482,12754,12930,13302,13797,15510,15722,15855,
#Partially deleted in new
chr3	9917097	9929880	chr3:9917097-9929880	0	+	9917315	9924107	789624	11	323,22,153,110,112,257,60,55,182,51,29,	0,615,825,1402,3393,6783,7134,11068,11207,11482,12754,
#Partially deleted in new
chr3	9917097	9928385	chr3:9917097-9928385	0	+	9917315	9920507	789624	8	323,22,153,112,140,60,55,81,	0,615,825,3393,6783,7134,11068,11207,
#Partially deleted in new
chr3	9917097	9928630	chr3:9917097-9928630	0	+	9917315	9928630	789624	10	323,22,153,110,112,140,60,55,182,51,	0,615,825,1402,3393,6783,7134,11068,11207,11482,
#Partially deleted in new
chr3	9917097	9933620	chr3:9917097-9933620	0	+	9917315	9920507	789624	15	323,22,153,75,112,140,60,55,182,46,122,60,49,96,668,	0,615,825,1437,3393,6783,7134,11068,11207,12754,12930,13302,13797,15510,15855,
#Partially deleted in new
chr3	9917097	9933593	chr3:9917097-9933593	0	+	9917097	9917097	789624	17	323,22,153,75,110,112,411,55,182,51,46,122,60,49,96,39,641,	0,615,825,1237,1402,3393,6783,11068,11207,11482,12754,12930,13302,13797,15510,15722,15855,
#Deleted in new
chr3	9917097	9917965	chr3:9917097-9917965	0	+	9917097	9917097	8553170	2	323,253,	0,615,
#Partially deleted in new
chr3	9917097	9933630	chr3:9917097-9933630	0	+	9917097	9917097	8553170	17	323,22,153,75,110,112,140,60,55,182,51,46,122,60,49,96,811,	0,615,825,1237,1402,3393,6783,7134,11068,11207,11482,12754,12930,13302,13797,15510,15722,
#Partially deleted in new
chr3	9917097	9933617	chr3:9917097-9933617	0	+	9917315	9918012	8553170	16	323,22,212,75,110,112,257,60,55,182,51,49,49,96,39,665,	0,615,766,1237,1402,3393,6783,7134,11068,11207,11482,12751,13797,15510,15722,15855,
#Deleted in new
chr3	9917101	9917957	chr3:9917101-9917957	0	+	9917101	9917101	8553170	2	319,245,	0,611,
#Partially deleted in new
chr3	9917108	9933616	chr3:9917108-9933616	0	+	9917108	9917108	8553170	16	312,22,153,75,110,112,411,55,182,51,46,122,49,96,39,664,	0,604,814,1226,1391,3382,6772,11057,11196,11471,12743,12919,13786,15499,15711,15844,
#Deleted in new
chr3	9917108	9918076	chr3:9917108-9918076	0	+	9917108	9917108	8553170	3	312,22,213,	0,604,755,
#Partially deleted in new
chr3	9917108	9933621	chr3:9917108-9933621	1	+	9917315	9933593	8553170	18	312,22,153,75,110,112,140,60,55,182,51,46,122,60,49,96,39,669,	0,604,814,1226,1391,3382,6772,7123,11057,11196,11471,12743,12919,13291,13786,15499,15711,15844,
#Partially deleted in new
chr3	9917118	9933621	chr3:9917118-9933621	1	+	9917315	9933593	789624	19	302,22,153,75,110,112,45,140,60,55,182,51,46,122,60,49,96,39,669,	0,594,804,1216,1381,3372,3806,6762,7113,11047,11186,11461,12733,12909,13281,13776,15489,15701,15834,
#Partially deleted in new
chr3	9917118	9930444	chr3:9917118-9930444	0	+	9917315	9930444	789624	14	302,22,153,110,112,45,140,60,55,182,51,46,122,45,	0,594,804,1381,3372,3806,6762,7113,11047,11186,11461,12733,12909,13281,
#Partially deleted in new
chr3	9917124	9933617	chr3:9917124-9933617	0	+	9917315	9918012	789624	17	296,22,149,75,110,112,45,140,60,55,182,46,122,60,49,96,665,	0,588,802,1210,1375,3366,3800,6756,7107,11041,11180,12727,12903,13275,13770,15483,15828,
#Partially deleted in new
chr3	9917124	9924045	chr3:9917124-9924045	0	+	9917315	9917548	789624	8	296,115,22,149,75,110,112,165,	0,394,588,802,1210,1375,3366,6756,
#Partially deleted in new
chr3	9917133	9924292	chr3:9917133-9924292	0	+	9917315	9920507	789624	8	287,22,153,75,99,112,140,61,	0,579,789,1201,1366,3357,6747,7098,
#Partially deleted in new
chr3	9917141	9924263	chr3:9917141-9924263	0	+	9917141	9917141	8553170	6	279,22,153,110,112,383,	0,571,781,1358,3349,6739,
#Partially deleted in new
chr3	9917154	9920600	chr3:9917154-9920600	0	+	9917315	9918095	789624	6	266,22,189,75,110,110,	0,558,768,1180,1345,3336,
#Partially deleted in new
chr3	9917162	9933617	chr3:9917162-9933617	1	+	9917315	9933593	789624	17	258,22,153,75,110,112,140,60,55,182,46,122,60,49,96,39,665,	0,550,760,1172,1337,3328,6718,7069,11003,11142,12689,12865,13237,13732,15445,15657,15790,
#Partially deleted in new
chr3	9917315	9933616	chr3:9917315-9933616	1	+	9917315	9933593	789624	18	105,22,153,75,110,112,45,140,60,55,182,51,46,122,60,49,96,664,	0,397,607,1019,1184,3175,3609,6565,6916,10850,10989,11264,12536,12712,13084,13579,15292,15637,
#Partially deleted in new
chr3	9917382	9924283	chr3:9917382-9924283	0	+	9917382	9924283	789624	8	38,22,153,75,110,43,140,52,	0,330,540,952,1117,3177,6498,6849,
#Deleted in new
chr3	9919050	9919153	chr3:9919050-9919153	3	-	9919050	9919050	8553170	1	103,	0,
#Partially deleted in new
chr3	9920393	9924268	chr3:9920393-9924268	0	+	9920393	9920393	8553170	2	209,388,	0,3487,
#Partially deleted in new
chr3	9924021	9932701	chr3:9924021-9932701	0	+	9924021	9924021	8553170	8	270,55,182,51,46,60,49,94,	0,4144,4283,4558,5830,6378,6873,8586,
#Partially deleted in new
chr3	9928160	9933148	chr3:9928160-9933148	0	+	9928160	9928160	8553170	9	60,182,51,46,122,60,49,96,196,	0,144,419,1691,1867,2239,2734,4447,4792,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	9929027	9933620	chr3:9929027-9933620	0	+	9929027	9929027	8553170	6	870,122,60,49,96,668,	0,1000,1372,1867,3580,3925,
#Partially deleted in new
chr3	9930581	9932703	chr3:9930581-9932703	0	+	9930581	9930581	8553170	2	362,96,	0,2026,
#Partially deleted in new
chr3	9930822	9932958	chr3:9930822-9932958	0	+	9930822	9930822	8553170	2	121,351,	0,1785,
#Partially deleted in new
chr3	9933821	9944994	chr3:9933821-9944994	1	+	9934438	9944579	789624	11	31,193,83,111,92,177,96,84,96,135,630,	0,598,1013,3740,4193,7028,7289,8991,9255,9559,10543,
#Partially deleted in new
chr3	9933839	9945413	chr3:9933839-9945413	3	+	9934438	9944579	789624	10	773,83,111,92,177,96,84,96,135,1049,	0,995,3722,4175,7010,7271,8973,9237,9541,10525,
#Partially deleted in new
chr3	9933844	9944999	chr3:9933844-9944999	1	+	9934438	9944579	789624	11	76,193,83,111,92,177,96,84,96,135,635,	0,575,990,3717,4170,7005,7266,8968,9232,9536,10520,
#Partially deleted in new
chr3	9933855	9945032	chr3:9933855-9945032	1	+	9934438	9944391	789624	12	65,193,83,111,92,177,96,84,96,135,194,668,	0,564,979,3706,4159,6994,7255,8957,9221,9525,10046,10509,
#Partially deleted in new
chr3	9934418	9943175	chr3:9934418-9943175	0	+	9934438	9940898	789624	6	194,83,167,96,84,99,	0,416,6431,6692,8394,8658,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	9934482	9938579	chr3:9934482-9938579	0	+	9934482	9934482	8553170	4	130,83,111,565,	0,352,3079,3532,
#Deleted in new
chr3	9934504	9935086	chr3:9934504-9935086	0	+	9934504	9934504	8553170	2	108,252,	0,330,
#Deleted in new
chr3	9935705	9936258	chr3:9935705-9936258	3	+	9935705	9935705	8553170	1	553,	0,
#Partially deleted in new
chr3	9941123	9944423	chr3:9941123-9944423	0	+	9941123	9941123	8553170	5	83,84,177,34,59,	0,1689,1953,2358,3241,
#Partially deleted in new
chr3	9941154	9943480	chr3:9941154-9943480	0	+	9941154	9941154	8553170	3	52,84,404,	0,1658,1922,
#Deleted in new
chr3	9942792	9945014	chr3:9942792-9945014	0	+	9942792	9943500	789624	4	104,77,135,650,	0,284,588,1572,
#Deleted in new
chr3	9942812	9944531	chr3:9942812-9944531	0	+	9942812	9942812	8553170	3	84,439,167,	0,264,1552,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	9945541	9952374	chr3:9945541-9952374	0	-	9946226	9950115	789624	5	170,1917,156,1072,53,	0,543,3216,3559,6780,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	9945541	9952394	chr3:9945541-9952394	3	-	9946226	9950115	789624	4	2460,156,1072,73,	0,3216,3559,6780,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	9947403	9954787	chr3:9947403-9954787	3	+	9947403	9947403	789624	4	201,114,115,184,	0,663,951,7200,
#Partially deleted in new
chr3	9948579	9952390	chr3:9948579-9952390	1	-	9948662	9950115	789624	3	334,1072,69,	0,521,3742,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	9958716	9962539	chr3:9958716-9962539	3	+	9958716	9958716	8553170	1	3823,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	9962536	9987120	chr3:9962536-9987120	3	-	9964068	9986661	789624	8	1661,83,80,82,105,94,58,614,	0,7182,8045,11091,11847,14420,14852,23970,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	9968643	9986838	chr3:9968643-9986838	0	-	9968643	9968643	8553170	7	1158,80,82,105,94,58,332,	0,1938,4984,5740,8313,8745,17863,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	9973505	9986682	chr3:9973505-9986682	1	-	9973623	9986661	789624	6	204,105,94,58,114,176,	0,878,3451,3883,8128,13001,
#Partially deleted in new
chr3	9977028	10011116	chr3:9977028-10011116	0	-	9977028	9986661	789624	4	22,58,396,94,	0,360,9478,33994,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	9986892	10002765	chr3:9986892-10002765	7	+	9986892	9986892	16724991	4	372,102,36,49,	0,1013,1819,15824,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	9986910	10005244	chr3:9986910-10005244	4	+	9986910	9986910	16724991	2	354,2528,	0,15806,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	9987214	10003097	chr3:9987214-10003097	4	+	9987214	9987214	16724991	4	50,91,36,381,	0,600,1497,15502,
#Partially deleted in new
chr3	9987903	9994331	chr3:9987903-9994331	5	+	9987903	9987903	16724991	5	104,106,37,143,144,	0,468,808,4965,6284,
#Partially deleted in new
chr3	9988704	10003106	chr3:9988704-10003106	4	+	9988704	9988704	16724991	2	43,390,	0,14012,
#Deleted in new
chr3	10000646	10000940	chr3:10000646-10000940	7	-	10000646	10000646	16724991	1	294,	0,
#Deleted in new
chr3	10004267	10006990	chr3:10004267-10006990	5	+	10004267	10004267	16724991	2	499,184,	0,2539,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	10006417	10011095	chr3:10006417-10011095	3	-	10006417	10006417	8553170	4	1206,249,232,210,	0,1986,3753,4468,
#Deleted in new
chr3	10006444	10009131	chr3:10006444-10009131	0	-	10006444	10006444	8553170	3	1179,249,138,	0,1959,2549,
#Deleted in new
chr3	10007343	10008480	chr3:10007343-10008480	0	-	10007343	10007343	8553170	2	280,77,	0,1060,
#Partially deleted in new
chr3	10007425	10011176	chr3:10007425-10011176	0	-	10007425	10007425	8553170	3	198,215,154,	0,978,3597,
#Partially deleted in new
chr3	10007461	10011209	chr3:10007461-10011209	0	-	10007461	10007461	8553170	3	162,249,187,	0,942,3561,
#Partially deleted in new
chr3	10008302	10011114	chr3:10008302-10011114	0	-	10008302	10008302	8553170	2	350,229,	0,2583,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	10009887	10011177	chr3:10009887-10011177	0	-	10009887	10009887	8553170	2	515,155,	0,1135,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	10014237	10026357	chr3:10014237-10026357	7	-	10014237	10014237	16724991	3	1289,188,317,	0,9322,11803,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	10015122	10026360	chr3:10015122-10026360	4	-	10015122	10015122	16724991	3	404,218,320,	0,8407,10918,
#Partially deleted in new
chr3	10017489	10023747	chr3:10017489-10023747	5	-	10017489	10017489	16724991	2	582,188,	0,6070,
#Partially deleted in new
chr3	10017496	10026365	chr3:10017496-10026365	5	-	10017496	10017496	16724991	3	575,188,325,	0,6063,8544,
#Partially deleted in new
chr3	10017752	10026357	chr3:10017752-10026357	4	-	10017752	10017752	16724991	3	319,218,317,	0,5777,8288,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	10022926	10026326	chr3:10022926-10026326	4	-	10022926	10022926	16724991	2	821,286,	0,3114,
#Boundary problem: need 43, got 0, diff 43, mapped 0.0
chr3	10026413	10099660	chr3:10026413-10099660	3	+	10028657	10098950	789624	43	60,97,141,68,104,61,53,79,125,88,105,101,109,36,144,135,132,111,110,61,120,74,147,101,116,109,111,110,144,117,129,119,111,131,94,123,94,72,39,75,75,147,941,	0,2211,6418,8055,8281,8759,9873,12865,13307,15209,16145,16636,17070,17415,20166,21503,22960,25973,33880,35737,37378,37942,38315,38980,39450,40795,46457,46839,48116,51667,54686,54932,59398,60720,62035,62414,63878,65767,66871,67875,68786,69912,72306,
#Boundary problem: need 44, got 0, diff 44, mapped 0.0
chr3	10026428	10101930	chr3:10026428-10101930	1	+	10028657	10101262	789624	44	45,97,141,68,104,61,53,79,125,88,105,101,109,36,144,135,132,111,110,61,120,74,147,101,116,109,111,110,144,117,129,119,111,131,94,123,94,72,39,75,75,147,96,743,	0,2196,6403,8040,8266,8744,9858,12850,13292,15194,16130,16621,17055,17400,20151,21488,22945,25958,33865,35722,37363,37927,38300,38965,39435,40780,46442,46824,48101,51652,54671,54917,59383,60705,62020,62399,63863,65752,66856,67860,68771,69897,72291,74759,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	10026467	10034513	chr3:10026467-10034513	0	+	10028657	10032351	789624	5	159,97,125,141,45,	0,2157,5831,6364,8001,
#Boundary problem: need 44, got 0, diff 44, mapped 0.0
chr3	10026498	10101930	chr3:10026498-10101930	1	+	10028657	10101262	789624	44	128,97,141,68,104,61,53,79,125,88,105,101,109,36,144,135,132,111,110,61,120,74,147,101,116,109,111,110,144,117,129,119,111,131,94,123,94,72,39,75,75,147,96,743,	0,2126,6333,7970,8196,8674,9788,12780,13222,15124,16060,16551,16985,17330,20081,21418,22875,25888,33795,35652,37293,37857,38230,38895,39365,40710,46372,46754,48031,51582,54601,54847,59313,60635,61950,62329,63793,65682,66786,67790,68701,69827,72221,74689,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	10028619	10041562	chr3:10028619-10041562	1	+	10028657	10039876	789624	8	102,141,68,104,61,53,79,1842,	0,4212,5849,6075,6553,7667,10659,11101,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	10028657	10032351	chr3:10028657-10032351	1	+	10028657	10032351	789624	2	64,53,	0,3641,
#Partially deleted in new
chr3	10034706	10040684	chr3:10034706-10040684	0	+	10034706	10034706	8553170	6	92,61,53,79,125,148,	0,466,1580,4572,5014,5830,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	10037551	10037655	chr3:10037551-10037655	3	+	10037551	10037551	8553170	1	104,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	10045526	10048059	chr3:10045526-10048059	0	+	10045526	10045526	8553170	3	218,144,143,	0,1053,2390,
#Partially deleted in new
chr3	10046426	10049504	chr3:10046426-10049504	0	+	10046426	10046426	8553170	3	297,135,131,	0,1490,2947,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr3	10049461	10101926	chr3:10049461-10101926	0	+	10049461	10092247	789624	27	44,111,110,61,120,74,147,101,116,109,111,110,144,117,129,119,111,131,94,123,72,39,75,75,147,96,739,	0,2925,10832,12689,14330,14894,15267,15932,16402,17747,23409,23791,25068,28619,31638,31884,36350,37672,38987,39366,42719,43823,44827,45738,46864,49258,51726,
#Partially deleted in new
chr3	10057972	10058287	chr3:10057972-10058287	7	-	10057972	10057972	16724991	1	315,	0,
#Partially deleted in new
chr3	10064354	10072978	chr3:10064354-10072978	0	+	10064354	10064354	8553170	5	75,147,101,116,108,	0,374,1039,1509,8516,
#Partially deleted in new
chr3	10064692	10072964	chr3:10064692-10072964	0	+	10064692	10064692	8553170	5	183,101,116,109,94,	0,701,1171,2516,8178,
#Partially deleted in new
chr3	10081316	10108084	chr3:10081316-10108084	0	-	10081316	10081316	8553170	4	215,109,25,70,	0,5815,13549,26698,
#Partially deleted in new
chr3	10081319	10095347	chr3:10081319-10095347	0	-	10081319	10081319	8553170	4	212,109,25,91,	0,5812,13546,13937,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	10081319	10085828	chr3:10081319-10085828	0	-	10081319	10081319	8553170	3	212,174,31,	0,2224,4478,
#Partially deleted in new
chr3	10081319	10108231	chr3:10081319-10108231	3	-	10104240	10104774	789624	3	212,585,217,	0,22878,26695,
#Partially deleted in new
chr3	10093287	10101282	chr3:10093287-10101282	0	+	10093287	10093287	8553170	5	36,75,147,96,95,	0,1912,3038,5432,7900,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	10102902	10104768	chr3:10102902-10104768	0	-	10102990	10104768	789624	2	187,195,	0,1671,
#Partially deleted in new
chr3	10103936	10108223	chr3:10103936-10108223	1	-	10104240	10104774	789624	2	846,209,	0,4078,
#Partially deleted in new
chr3	10115591	10127190	chr3:10115591-10127190	3	+	10115701	10126295	0	3	228,83,922,	0,10034,10677,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	10141007	10152220	chr3:10141007-10152220	3	+	10141847	10149965	0	3	1180,123,2434,	0,5506,8779,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	10141787	10152082	chr3:10141787-10152082	1	+	10141847	10149965	0	2	400,2296,	0,7999,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	10142545	10150145	chr3:10142545-10150145	0	+	10142545	10142545	8553170	3	476,123,359,	0,3968,7241,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr3	10164864	10243743	chr3:10164864-10243743	3	+	10164954	10242228	0	13	184,183,147,104,195,65,115,110,196,63,201,292,1628,	0,12973,35504,44724,48342,48619,52069,54815,57771,61506,69594,73883,77251,
#Partially deleted in new
chr3	10248022	10281216	chr3:10248022-10281216	3	+	10249200	10279025	789624	8	1045,420,534,885,128,184,150,1996,	0,1172,12114,22108,28338,30256,30862,31198,
#Partially deleted in new
chr3	10248911	10281218	chr3:10248911-10281218	1	+	10249200	10279025	789624	8	156,420,534,885,128,184,179,1998,	0,283,11225,21219,27449,29367,29973,30309,
#Partially deleted in new
chr3	10249371	10285796	chr3:10249371-10285796	2	+	10249371	10278687	789624	8	243,534,885,128,184,97,150,49,	0,10765,20759,26989,28907,29292,29513,36376,
#Partially deleted in new
chr3	10249371	10285796	chr3:10249371-10285796	1	+	10249371	10260278	789624	8	243,485,885,128,184,150,707,49,	0,10814,20759,26989,28907,29513,29849,36376,
#Partially deleted in new
chr3	10270919	10279165	chr3:10270919-10279165	0	+	10270919	10279025	789624	4	96,128,184,281,	0,5441,7359,7965,
#Partially deleted in new
chr3	10276376	10280133	chr3:10276376-10280133	0	+	10276376	10276376	8553170	5	112,184,97,150,913,	0,1902,2287,2508,2844,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	10284418	10285746	chr3:10284418-10285746	3	+	10284418	10284418	789624	1	1328,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	10284418	10285745	chr3:10284418-10285745	0	+	10284418	10284418	8553170	1	1327,	0,
#Deleted in new
chr3	10285674	10292947	chr3:10285674-10292947	3	-	10285874	10290180	0	6	220,109,117,137,736,106,	0,1029,4087,4398,5041,7167,
#Deleted in new
chr3	10285749	10292917	chr3:10285749-10292917	1	-	10285874	10290180	0	6	145,109,114,137,275,76,	0,954,4012,4323,4966,7092,
#Deleted in new
chr3	10285749	10290357	chr3:10285749-10290357	0	-	10285749	10285749	8553170	4	145,109,117,285,	0,954,4012,4323,
#Deleted in new
chr3	10285749	10290914	chr3:10285749-10290914	0	-	10285749	10285749	8553170	4	145,109,117,199,	0,954,4012,4966,
#Deleted in new
chr3	10285750	10290212	chr3:10285750-10290212	1	-	10285843	10290180	0	3	144,117,140,	0,4011,4322,
#Deleted in new
chr3	10285753	10292917	chr3:10285753-10292917	1	-	10285874	10290180	0	6	141,109,114,137,736,76,	0,950,4008,4319,4962,7088,
#Deleted in new
chr3	10285753	10292933	chr3:10285753-10292933	1	-	10285874	10290180	0	6	141,109,117,137,197,92,	0,950,4008,4319,4962,7088,
#Deleted in new
chr3	10285753	10292917	chr3:10285753-10292917	1	-	10285874	10292913	0	4	141,109,117,76,	0,950,4008,7088,
#Deleted in new
chr3	10285753	10293449	chr3:10285753-10293449	3	+	10285753	10285753	789624	4	100,68,158,1382,	0,1660,2191,6314,
#Deleted in new
chr3	10285753	10292917	chr3:10285753-10292917	1	-	10285874	10292913	0	3	141,109,76,	0,950,7088,
#Deleted in new
chr3	10285753	10292917	chr3:10285753-10292917	1	-	10285843	10292913	789624	2	141,76,	0,7088,
#Deleted in new
chr3	10285753	10292917	chr3:10285753-10292917	1	-	10285874	10292913	0	4	141,109,114,76,	0,950,4008,7088,
#Deleted in new
chr3	10285753	10292917	chr3:10285753-10292917	1	-	10285874	10290180	0	6	141,109,117,137,275,76,	0,950,4008,4319,4962,7088,
#Deleted in new
chr3	10285753	10292917	chr3:10285753-10292917	0	+	10285753	10285753	8553170	4	100,68,158,595,	0,1660,2191,6569,
#Deleted in new
chr3	10285753	10292917	chr3:10285753-10292917	0	+	10285753	10285753	8553170	2	100,850,	0,6314,
#Deleted in new
chr3	10285812	10289807	chr3:10285812-10289807	0	-	10285812	10285812	8553170	4	82,109,299,46,	0,891,1215,3949,
#Deleted in new
chr3	10285812	10289807	chr3:10285812-10289807	0	-	10285812	10285812	8553170	5	82,109,299,192,46,	0,891,1215,2212,3949,
#Deleted in new
chr3	10287412	10287482	chr3:10287412-10287482	3	+	10287412	10287412	8553170	1	70,	0,
#Deleted in new
chr3	10287977	10292580	chr3:10287977-10292580	0	+	10287977	10287977	8553170	2	129,513,	0,4090,
#Deleted in new
chr3	10290079	10292938	chr3:10290079-10292938	0	-	10290079	10290180	789624	2	130,97,	0,2762,
#Partially deleted in new
chr3	10293130	10305072	chr3:10293130-10305072	0	-	10293130	10293130	8553170	3	206,147,40,	0,10895,11902,
#Partially deleted in new
chr3	10300930	10321082	chr3:10300930-10321082	1	-	10301260	10319150	0	10	444,147,124,134,134,152,116,45,34,33,	0,3095,4102,4628,11034,11648,14390,17119,18208,20119,
#Partially deleted in new
chr3	10300930	10321178	chr3:10300930-10321178	3	-	10301260	10321052	0	9	444,147,124,134,134,152,116,45,129,	0,3095,4102,4628,11034,11648,14390,17119,20119,
#Partially deleted in new
chr3	10300930	10321041	chr3:10300930-10321041	1	-	10301260	10318055	0	9	444,147,124,134,134,152,116,45,171,	0,3095,4102,4628,11034,11648,14390,17119,19940,
#Partially deleted in new
chr3	10300932	10313971	chr3:10300932-10313971	0	-	10300932	10300932	8553170	6	442,147,124,134,134,1393,	0,3093,4100,4626,11032,11646,
#Partially deleted in new
chr3	10300949	10321061	chr3:10300949-10321061	1	-	10301105	10318055	789624	9	198,147,124,134,134,152,116,45,553,	0,3076,4083,4609,11015,11629,14371,17100,19559,
#Partially deleted in new
chr3	10300960	10321084	chr3:10300960-10321084	1	-	10301260	10319279	0	10	414,147,124,134,134,152,116,45,178,35,	0,3065,4072,4598,11004,11618,14360,17089,18178,20089,
#Partially deleted in new
chr3	10303550	10318080	chr3:10303550-10318080	0	-	10303550	10303550	8553170	7	622,124,134,134,152,116,31,	0,1482,2008,8414,9028,11770,14499,
#Deleted in new
chr3	10304034	10305910	chr3:10304034-10305910	0	-	10304034	10304034	8553170	3	138,124,352,	0,998,1524,
#Deleted in new
chr3	10304110	10305710	chr3:10304110-10305710	0	-	10304110	10304110	8553170	2	62,678,	0,922,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	10311572	10321093	chr3:10311572-10321093	0	-	10311572	10311572	8553170	5	526,152,116,45,44,	0,1006,3748,6477,9477,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	10311572	10312834	chr3:10311572-10312834	0	-	10311572	10311572	8553170	2	526,256,	0,1006,
#Partially deleted in new
chr3	10312645	10321060	chr3:10312645-10321060	0	-	10312645	10319150	789624	5	85,116,45,34,552,	0,2675,5404,6493,7863,
#Partially deleted in new
chr3	10313079	10321112	chr3:10313079-10321112	0	-	10313079	10313079	8553170	4	358,116,45,63,	0,2241,4970,7970,
#Partially deleted in new
chr3	10314952	10321112	chr3:10314952-10321112	0	-	10314952	10314952	8553170	3	484,45,63,	0,3097,6097,
#Partially deleted in new
chr3	10315141	10321086	chr3:10315141-10321086	0	-	10315141	10315141	8553170	4	295,45,178,37,	0,2908,3997,5908,
#Deleted in new
chr3	10318067	10321056	chr3:10318067-10321056	0	-	10318067	10319279	789624	4	27,34,60,446,	0,1071,1189,2543,
#Deleted in new
chr3	10318069	10321058	chr3:10318069-10321058	0	-	10318069	10319279	789624	4	25,34,60,550,	0,1069,1187,2439,
#Deleted in new
chr3	10319205	10321093	chr3:10319205-10321093	0	-	10319205	10319279	789624	2	111,483,	0,1405,
#Partially deleted in new
chr3	10324022	10505584	chr3:10324022-10505584	1	-	10328813	10449543	789624	23	5103,183,108,212,214,192,107,88,180,235,242,243,215,159,42,60,33,126,126,258,198,518,120,	0,14153,16219,16470,18729,21361,22008,26089,26375,34668,35859,47786,51407,54229,55220,61245,62457,64254,76930,78068,86595,125322,181442,
#Partially deleted in new
chr3	10324022	10505657	chr3:10324022-10505657	1	-	10328813	10449543	789624	20	5103,183,108,212,214,192,107,88,180,235,242,243,215,159,126,126,258,198,518,193,	0,14153,16219,16470,18729,21361,22008,26089,26375,34668,35859,47786,51407,54229,64254,76930,78068,86595,125322,181442,
#Partially deleted in new
chr3	10324022	10505536	chr3:10324022-10505536	1	-	10328813	10449543	789624	20	5103,183,108,212,214,192,107,88,180,235,242,243,215,159,126,126,258,198,518,72,	0,14153,16219,16470,18729,21361,22008,26089,26375,34668,35859,47786,51407,54229,64254,76930,78068,86595,125322,181442,
#Partially deleted in new
chr3	10324022	10534133	chr3:10324022-10534133	0	-	10332029	10449543	789624	22	5103,127,172,183,108,212,214,192,107,88,180,235,242,243,215,159,126,126,258,198,518,95,	0,7888,12106,14153,16219,16470,18729,21361,22008,26089,26375,34668,35859,47786,51407,54229,64254,76930,78068,86595,125322,210016,
#Partially deleted in new
chr3	10326077	10449543	chr3:10326077-10449543	1	-	10332029	10449543	789624	23	3048,55,172,183,108,212,214,192,107,88,180,235,242,243,215,159,42,60,126,126,258,198,199,	0,5905,10051,12098,14164,14415,16674,19306,19953,24034,24320,32613,33804,45731,49352,52174,53165,59190,62199,74875,76013,84540,123267,
#Partially deleted in new
chr3	10326227	10346069	chr3:10326227-10346069	0	-	10329099	10346069	789624	8	2898,183,190,108,212,214,192,39,	0,11948,12498,14014,14265,16524,19156,19803,
#Partially deleted in new
chr3	10326270	10401025	chr3:10326270-10401025	0	-	10328813	10401025	789624	18	2855,183,108,212,214,192,107,88,180,235,242,243,215,159,42,60,126,73,	0,11905,13971,14222,16481,19113,19760,23841,24127,32420,33611,45538,49159,51981,52972,58997,62006,74682,
#Partially deleted in new
chr3	10326274	10505531	chr3:10326274-10505531	1	-	10332029	10449543	789624	23	2851,55,172,183,108,212,214,192,107,88,180,235,242,243,215,159,42,126,126,258,198,518,67,	0,5708,9854,11901,13967,14218,16477,19109,19756,23837,24123,32416,33607,45534,49155,51977,52968,62002,74678,75816,84343,123070,179190,
#Partially deleted in new
chr3	10328007	10708007	chr3:10328007-10708007	3	-	10328813	10449543	789624	22	1118,183,108,212,214,192,107,88,180,235,242,243,215,159,126,126,258,198,518,95,45,93,	0,10168,12234,12485,14744,17376,18023,22104,22390,30683,31874,43801,47422,50244,60269,72945,74083,82610,121337,206031,291909,379907,
#Partially deleted in new
chr3	10328101	10449543	chr3:10328101-10449543	1	-	10328813	10449543	789624	20	1024,183,108,212,214,192,107,88,180,235,242,243,215,159,42,126,126,258,198,199,	0,10074,12140,12391,14650,17282,17929,22010,22296,30589,31780,43707,47328,50150,51141,60175,72851,73989,82516,121243,
#Partially deleted in new
chr3	10328101	10449613	chr3:10328101-10449613	1	-	10328813	10449543	789624	22	1024,183,108,212,214,192,107,88,180,235,242,243,215,159,42,60,33,126,126,258,198,269,	0,10074,12140,12391,14650,17282,17929,22010,22296,30589,31780,43707,47328,50150,51141,57166,58378,60175,72851,73989,82516,121243,
#Partially deleted in new
chr3	10328146	10449591	chr3:10328146-10449591	1	-	10329099	10449543	789624	20	979,172,183,108,212,214,192,107,88,180,235,242,243,215,159,126,126,258,198,247,	0,7982,10029,12095,12346,14605,17237,17884,21965,22251,30544,31735,43662,47283,50105,60130,72806,73944,82471,121198,
#Partially deleted in new
chr3	10328202	10449780	chr3:10328202-10449780	1	-	10332029	10449543	789624	21	923,55,172,183,108,212,214,192,107,88,180,235,242,243,215,159,126,126,258,198,436,	0,3780,7926,9973,12039,12290,14549,17181,17828,21909,22195,30488,31679,43606,47227,50049,60074,72750,73888,82415,121142,
#Partially deleted in new
chr3	10328810	10332324	chr3:10328810-10332324	0	-	10328810	10328810	8553170	2	315,181,	0,3333,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	10330228	10330285	chr3:10330228-10330285	3	+	10330228	10330228	5263520	1	57,	0,
#Partially deleted in new
chr3	10387883	10505584	chr3:10387883-10505584	0	-	10387883	10387883	8553170	6	519,126,258,198,518,120,	0,13069,14207,22734,61461,117581,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	10394488	10394562	chr3:10394488-10394562	3	-	10394488	10394488	5263520	1	74,	0,
#Deleted in new
chr3	10566254	10570375	chr3:10566254-10570375	3	-	10566254	10566254	8553170	2	217,255,	0,3866,
#Deleted in new
chr3	10626020	10626807	chr3:10626020-10626807	3	-	10626020	10626020	789624	2	465,42,	0,745,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	10759483	10764192	chr3:10759483-10764192	3	-	10759483	10759483	789624	3	2439,298,132,	0,3716,4577,
#Partially deleted in new
chr3	10761705	10764181	chr3:10761705-10764181	0	-	10761705	10761705	8553170	3	217,91,121,	0,1126,2355,
#Partially deleted in new
chr3	10767463	10771718	chr3:10767463-10771718	3	+	10767463	10767463	8553170	2	112,340,	0,3915,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	10816199	10940733	chr3:10816199-10940733	3	+	10816265	10938402	789624	14	322,135,141,91,133,135,104,125,113,138,103,101,171,2484,	0,3265,3512,7102,28014,58761,95890,102129,109804,113002,116951,117866,118829,122050,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	10816200	10825498	chr3:10816200-10825498	1	+	10816265	10823396	789624	4	321,135,141,2197,	0,3264,3511,7101,
#Deleted in new
chr3	10933965	10935397	chr3:10933965-10935397	0	+	10933965	10933965	8553170	2	201,369,	0,1063,
#Partially deleted in new
chr3	10992185	11039174	chr3:10992185-11039174	3	+	11017211	11036966	789624	16	120,62,391,132,101,110,133,135,104,125,113,132,103,101,168,2313,	0,23486,24873,25657,26412,28027,30150,33263,33587,34049,36549,37035,38991,41453,42345,44676,
#Partially deleted in new
chr3	10992695	11039249	chr3:10992695-11039249	1	+	11017211	11036966	789624	16	234,62,391,132,101,110,133,135,104,125,113,132,103,101,168,2388,	0,22976,24363,25147,25902,27517,29640,32753,33077,33539,36039,36525,38481,40943,41835,44166,
#Partially deleted in new
chr3	10992727	11039247	chr3:10992727-11039247	1	+	11017211	11036966	789624	16	202,62,330,132,101,110,133,135,104,125,113,132,103,101,168,2386,	0,22944,24392,25115,25870,27485,29608,32721,33045,33507,36007,36493,38449,40911,41803,44134,
#Partially deleted in new
chr3	10992733	11025470	chr3:10992733-11025470	0	+	11017964	11025470	789624	8	196,62,201,132,101,110,133,22,	0,22938,24325,25109,25864,27479,29602,32715,
#Partially deleted in new
chr3	10992746	11034540	chr3:10992746-11034540	0	+	11017211	11022371	789624	14	183,62,391,132,110,133,135,104,125,113,132,103,101,10,	0,22925,24312,25096,27466,29589,32702,33026,33488,35988,36474,38430,40892,41784,
#Partially deleted in new
chr3	10992747	11038482	chr3:10992747-11038482	1	+	11017211	11036966	789624	18	182,164,843,62,391,132,101,110,133,135,104,125,113,132,103,101,168,1621,	0,19851,21284,22924,24311,25095,25850,27465,29588,32701,33025,33487,35987,36473,38429,40891,41783,44114,
#Partially deleted in new
chr3	10992747	11039058	chr3:10992747-11039058	1	+	11017211	11036966	789624	17	182,52,62,391,132,101,110,133,135,104,125,113,132,103,101,168,2197,	0,15564,22924,24311,25095,25850,27465,29588,32701,33025,33487,35987,36473,38429,40891,41783,44114,
#Partially deleted in new
chr3	10992747	11039169	chr3:10992747-11039169	1	+	11020275	11036966	789624	15	182,62,201,101,110,133,135,104,125,113,132,103,101,168,2308,	0,22924,24311,25850,27465,29588,32701,33025,33487,35987,36473,38429,40891,41783,44114,
#Partially deleted in new
chr3	10992747	11039187	chr3:10992747-11039187	1	+	11017211	11036966	789624	18	182,164,145,62,391,132,101,110,133,135,104,125,113,132,103,101,168,2326,	0,19851,21292,22924,24311,25095,25850,27465,29588,32701,33025,33487,35987,36473,38429,40891,41783,44114,
#Partially deleted in new
chr3	10992750	11039148	chr3:10992750-11039148	1	+	11020275	11036966	789624	14	179,140,101,110,133,135,104,125,113,132,103,101,168,2287,	0,24369,25847,27462,29585,32698,33022,33484,35984,36470,38426,40888,41780,44111,
#Partially deleted in new
chr3	10992753	11039233	chr3:10992753-11039233	1	+	11017211	11036966	789624	17	176,119,62,391,132,101,110,133,135,104,125,113,132,103,101,168,2372,	0,21312,22918,24305,25089,25844,27459,29582,32695,33019,33481,35981,36467,38423,40885,41777,44108,
#Partially deleted in new
chr3	10992753	11039214	chr3:10992753-11039214	1	+	11017211	11036966	789624	17	176,190,62,391,132,101,110,133,135,104,125,113,132,103,101,168,2353,	0,21241,22918,24305,25089,25844,27459,29582,32695,33019,33481,35981,36467,38423,40885,41777,44108,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	10992753	11029948	chr3:10992753-11029948	0	+	10992753	10992753	8553170	12	176,62,391,132,101,110,133,135,104,125,113,728,	0,22918,24305,25089,25844,27459,29582,32695,33019,33481,35981,36467,
#Partially deleted in new
chr3	10992753	11039230	chr3:10992753-11039230	1	+	11017211	11036966	789624	17	176,157,62,391,132,101,110,133,135,104,125,113,132,103,101,168,2369,	0,21964,22918,24305,25089,25844,27459,29582,32695,33019,33481,35981,36467,38423,40885,41777,44108,
#Partially deleted in new
chr3	10992754	11039186	chr3:10992754-11039186	1	+	11017211	11036966	789624	16	175,62,263,132,101,110,133,135,104,125,113,132,103,101,168,2325,	0,22917,24432,25088,25843,27458,29581,32694,33018,33480,35980,36466,38422,40884,41776,44107,
#Partially deleted in new
chr3	10992757	11038648	chr3:10992757-11038648	1	+	11020275	11036966	789624	15	172,62,140,101,110,133,135,104,125,113,132,103,101,168,1787,	0,22914,24362,25840,27455,29578,32691,33015,33477,35977,36463,38419,40881,41773,44104,
#Partially deleted in new
chr3	10992761	11039169	chr3:10992761-11039169	1	+	11017211	11036966	789624	15	168,391,132,101,110,133,135,104,125,113,132,103,101,168,2308,	0,24297,25081,25836,27451,29574,32687,33011,33473,35973,36459,38415,40877,41769,44100,
#Partially deleted in new
chr3	10992761	11039230	chr3:10992761-11039230	1	+	11017211	11036966	789624	18	168,164,153,62,391,132,101,110,133,135,104,125,113,132,103,101,168,2369,	0,19837,21270,22910,24297,25081,25836,27451,29574,32687,33011,33473,35973,36459,38415,40877,41769,44100,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	10992761	11019762	chr3:10992761-11019762	0	+	10992761	10992761	8553170	3	168,62,2643,	0,22910,24358,
#Partially deleted in new
chr3	10992761	11039171	chr3:10992761-11039171	1	+	11017211	11036966	789624	17	168,153,62,391,132,101,110,133,135,104,125,113,132,103,101,168,2310,	0,21270,22910,24297,25081,25836,27451,29574,32687,33011,33473,35973,36459,38415,40877,41769,44100,
#Partially deleted in new
chr3	10992766	11039168	chr3:10992766-11039168	1	+	11017964	11036966	789624	16	163,62,140,132,101,110,133,135,104,125,113,132,103,101,168,2307,	0,22905,24353,25076,25831,27446,29569,32682,33006,33468,35968,36454,38410,40872,41764,44095,
#Partially deleted in new
chr3	10992769	11038729	chr3:10992769-11038729	1	+	11017211	11036966	789624	16	160,119,330,132,101,110,133,135,104,125,113,132,103,101,168,1868,	0,22902,24350,25073,25828,27443,29566,32679,33003,33465,35965,36451,38407,40869,41761,44092,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	10992789	11039148	chr3:10992789-11039148	0	+	10992789	10992789	8553170	15	140,62,391,132,101,2256,135,104,125,113,132,103,101,168,2287,	0,22882,24269,25053,25808,27423,32659,32983,33445,35945,36431,38387,40849,41741,44072,
#Partially deleted in new
chr3	10992792	11039169	chr3:10992792-11039169	1	+	11017211	11036966	789624	18	137,155,145,62,330,132,101,110,133,135,104,125,113,132,103,101,168,2308,	0,8356,21247,22879,24327,25050,25805,27420,29543,32656,32980,33442,35942,36428,38384,40846,41738,44069,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	10992796	11019750	chr3:10992796-11019750	0	+	10992796	10992796	8553170	3	133,62,2692,	0,22875,24262,
#Partially deleted in new
chr3	10992800	11039186	chr3:10992800-11039186	1	+	11017211	11036966	789624	15	129,263,132,101,110,133,135,104,125,113,132,103,101,168,2325,	0,24386,25042,25797,27412,29535,32648,32972,33434,35934,36420,38376,40838,41730,44061,
#Partially deleted in new
chr3	10992806	11039235	chr3:10992806-11039235	1	+	11017211	11036966	789624	14	123,62,201,110,133,135,104,125,113,132,103,101,168,2374,	0,22865,24252,27406,29529,32642,32966,33428,35928,36414,38370,40832,41724,44055,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	10992873	11039082	chr3:10992873-11039082	1	+	11017211	11036966	789624	17	56,39,62,391,132,101,110,133,135,104,125,113,132,103,101,168,2221,	0,18413,22798,24185,24969,25724,27339,29462,32575,32899,33361,35861,36347,38303,40765,41657,43988,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	10992921	11019776	chr3:10992921-11019776	1	+	11017211	11018782	789624	5	8,62,330,132,1179,	0,22750,24198,24921,25676,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	11006097	11019224	chr3:11006097-11019224	3	-	11006097	11006097	789624	3	291,188,105,	0,1094,13022,
#Partially deleted in new
chr3	11011658	11039192	chr3:11011658-11039192	1	+	11017211	11036966	789624	16	2526,62,391,132,101,110,133,135,104,125,113,132,103,101,168,2331,	0,4013,5400,6184,6939,8554,10677,13790,14114,14576,17076,17562,19518,21980,22872,25203,
#Partially deleted in new
chr3	11015446	11039179	chr3:11015446-11039179	1	+	11017211	11036966	789624	15	287,391,132,101,110,133,135,104,125,113,132,103,101,168,2318,	0,1612,2396,3151,4766,6889,10002,10326,10788,13288,13774,15730,18192,19084,21415,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	11015682	11019717	chr3:11015682-11019717	1	+	11017211	11018782	789624	4	51,391,132,1120,	0,1376,2160,2915,
#Partially deleted in new
chr3	11017080	11039101	chr3:11017080-11039101	1	+	11017211	11036966	789624	14	369,132,101,110,133,135,104,125,113,159,103,101,168,2240,	0,762,1517,3132,5255,8368,8692,9154,11654,12113,14096,16558,17450,19781,
#Partially deleted in new
chr3	11017130	11039037	chr3:11017130-11039037	1	+	11017211	11037625	789624	9	319,132,101,110,133,135,104,125,1477,	0,712,1467,3082,5205,8318,8642,9104,20430,
#Partially deleted in new
chr3	11017379	11025569	chr3:11017379-11025569	0	+	11017379	11022371	789624	5	70,132,101,133,121,	0,463,1218,4956,8069,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	11017379	11029832	chr3:11017379-11029832	0	+	11017379	11017379	8553170	9	70,132,101,110,133,135,104,125,1098,	0,463,1218,2833,4956,8069,8393,8855,11355,
#Partially deleted in new
chr3	11017402	11036917	chr3:11017402-11036917	0	+	11017402	11036917	789624	14	47,132,101,110,133,135,104,125,113,117,103,101,168,56,	0,440,1195,2810,4933,8046,8370,8832,11332,11833,13774,16236,17128,19459,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	11021119	11029942	chr3:11021119-11029942	0	+	11021119	11021119	8553170	5	4464,104,125,113,722,	0,4653,5115,7615,8101,
#Partially deleted in new
chr3	11030800	11039169	chr3:11030800-11039169	0	+	11030800	11030800	8553170	4	479,101,168,2308,	0,2838,3730,6061,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	11032190	11039169	chr3:11032190-11039169	0	+	11032190	11032190	8553170	3	1549,168,2308,	0,2340,4671,
#Partially deleted in new
chr3	11137092	11260775	chr3:11137092-11260775	3	+	11259037	11260501	0	2	307,1773,	0,121910,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	11154527	11263253	chr3:11154527-11263253	1	+	11259037	11260501	0	2	27,4251,	0,104475,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	11193438	11225877	chr3:11193438-11225877	3	-	11193438	11193438	8553170	4	449,212,157,178,	0,1554,13803,32261,
#Partially deleted in new
chr3	11226030	11259075	chr3:11226030-11259075	0	+	11259037	11259075	789624	2	501,73,	0,32972,
#Deleted in new
chr3	11234255	11234582	chr3:11234255-11234582	7	-	11234255	11234255	16724991	1	327,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	11252698	11263557	chr3:11252698-11263557	1	+	11259037	11260501	0	3	70,86,4555,	0,434,6304,
#Partially deleted in new
chr3	11272308	11313420	chr3:11272308-11313420	0	+	11298695	11313420	789624	8	122,66,246,170,55,118,78,117,	0,8728,9884,26377,27053,34634,36675,40995,
#Partially deleted in new
chr3	11272347	11299400	chr3:11272347-11299400	0	+	11298695	11299400	789624	5	83,109,246,170,39,	0,8646,9845,26338,27014,
#Partially deleted in new
chr3	11272347	11315388	chr3:11272347-11315388	0	+	11298695	11315388	789624	6	83,170,55,118,78,45,	0,26338,27014,34595,36636,42996,
#Partially deleted in new
chr3	11272374	11304667	chr3:11272374-11304667	0	+	11272374	11272374	8553170	5	56,95,170,55,164,	0,16271,26311,26987,32129,
#Partially deleted in new
chr3	11272381	11299170	chr3:11272381-11299170	0	+	11272381	11272381	8553170	2	49,485,	0,26304,
#Partially deleted in new
chr3	11272402	11307008	chr3:11272402-11307008	0	+	11298695	11307008	789624	5	28,246,170,55,66,	0,9790,26283,26959,34540,
#Partially deleted in new
chr3	11272405	11315482	chr3:11272405-11315482	0	+	11298695	11308999	789624	6	25,170,55,78,117,139,	0,26280,26956,36578,40898,42938,
#Partially deleted in new
chr3	11272415	11557665	chr3:11272415-11557665	3	+	11298695	11554843	789624	19	15,170,55,118,78,117,150,89,122,91,145,159,195,204,116,76,81,123,2855,	0,26270,26946,34527,36568,40888,42928,58924,60556,68229,69719,75461,86002,88165,90397,92243,107556,154388,282395,
#Partially deleted in new
chr3	11272415	11555083	chr3:11272415-11555083	1	+	11298695	11554843	789624	18	15,170,55,118,78,117,150,89,122,91,145,159,195,204,116,76,123,273,	0,26270,26946,34527,36568,40888,42928,58924,60556,68229,69719,75461,86002,88165,90397,92243,154388,282395,
#Partially deleted in new
chr3	11272415	11554988	chr3:11272415-11554988	1	+	11298695	11554843	789624	17	15,170,55,118,78,150,89,122,91,145,159,195,204,116,76,81,178,	0,26270,26946,34527,36568,42928,58924,60556,68229,69719,75461,86002,88165,90397,92243,107556,282395,
#Partially deleted in new
chr3	11272422	11306995	chr3:11272422-11306995	0	+	11298695	11306995	789624	4	287,170,55,53,	0,26263,26939,34520,
#Partially deleted in new
chr3	11272442	11304549	chr3:11272442-11304549	0	+	11272442	11272442	8553170	6	267,109,92,170,55,46,	0,8551,16206,26243,26919,32061,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	11277218	11309028	chr3:11277218-11309028	0	+	11298695	11309028	789624	5	201,170,55,118,45,	0,21467,22143,29724,31765,
#Deleted in new
chr3	11290405	11290663	chr3:11290405-11290663	7	-	11290405	11290405	16724991	1	258,	0,
#Partially deleted in new
chr3	11308441	11331393	chr3:11308441-11331393	0	+	11308441	11308441	8553170	5	171,78,117,150,54,	0,542,4862,6902,22898,
#Partially deleted in new
chr3	11308474	11313396	chr3:11308474-11313396	0	+	11308474	11308474	8553170	3	387,78,93,	0,509,4829,
#Partially deleted in new
chr3	11309008	11358610	chr3:11309008-11358610	0	+	11309008	11340707	789624	6	53,117,91,145,159,193,	0,4295,31636,33126,38868,49409,
#Partially deleted in new
chr3	11313342	11342279	chr3:11313342-11342279	0	+	11313342	11340645	789624	5	78,150,89,91,145,	0,2001,17997,27302,28792,
#Partially deleted in new
chr3	11331401	11347971	chr3:11331401-11347971	0	+	11331401	11331401	8553170	6	27,122,91,145,40,95,	0,1570,9243,10733,15124,16475,
#Partially deleted in new
chr3	11332712	11342207	chr3:11332712-11342207	0	+	11332712	11332712	8553170	3	381,91,73,	0,7932,9422,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	11342199	11348747	chr3:11342199-11348747	0	+	11342199	11342199	8553170	2	80,871,	0,5677,
#Partially deleted in new
chr3	11360580	11363096	chr3:11360580-11363096	0	+	11360580	11360580	8553170	2	204,284,	0,2232,
#Partially deleted in new
chr3	11364656	11446936	chr3:11364656-11446936	0	+	11364656	11446514	789624	4	78,81,123,428,	0,15315,62147,81852,
#Partially deleted in new
chr3	11364657	11477307	chr3:11364657-11477307	0	+	11364657	11477142	789624	4	77,81,123,174,	0,15314,62146,112476,
#Partially deleted in new
chr3	11364658	11510339	chr3:11364658-11510339	0	+	11364658	11510322	789624	4	76,81,123,155,	0,15313,62145,145526,
#Deleted in new
chr3	11488299	11488473	chr3:11488299-11488473	7	-	11488299	11488299	16724991	1	174,	0,
#Partially deleted in new
chr3	11529487	11529755	chr3:11529487-11529755	7	-	11529487	11529487	16724991	1	268,	0,
#Partially deleted in new
chr3	11556069	11720746	chr3:11556069-11720746	3	-	11558555	11703034	789624	6	2758,124,223,190,77,353,	0,3262,8727,45763,146901,164324,
#Partially deleted in new
chr3	11558068	11604581	chr3:11558068-11604581	1	-	11558555	11601909	789624	5	759,124,223,190,258,	0,1263,6728,43764,46255,
#Partially deleted in new
chr3	11558342	11582391	chr3:11558342-11582391	1	-	11558555	11582299	789624	4	485,124,223,106,	0,989,6454,23943,
#Partially deleted in new
chr3	11558469	11568924	chr3:11558469-11568924	1	-	11558555	11568606	789624	4	358,124,223,320,	0,862,6327,10135,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	11558475	11720722	chr3:11558475-11720722	1	-	11558555	11671340	789624	7	352,124,223,190,133,77,329,	0,856,6321,43357,112786,144495,161918,
#Partially deleted in new
chr3	11558475	11643924	chr3:11558475-11643924	1	-	11558555	11643518	789624	5	352,124,223,190,488,	0,856,6321,43357,84961,
#Partially deleted in new
chr3	11558757	11720729	chr3:11558757-11720729	0	-	11558757	11703034	789624	6	70,124,223,190,77,42,	0,574,6039,43075,144213,161930,
#Partially deleted in new
chr3	11559331	11719594	chr3:11559331-11719594	0	-	11559331	11703034	789624	5	124,223,190,77,178,	0,5465,42501,143639,160085,
#Partially deleted in new
chr3	11564765	11719638	chr3:11564765-11719638	0	-	11564765	11703034	789624	4	254,190,77,60,	0,37067,138205,154813,
#Partially deleted in new
chr3	11564851	11612667	chr3:11564851-11612667	0	-	11564851	11601909	789624	3	168,190,79,	0,36981,47737,
#Partially deleted in new
chr3	11564891	11710537	chr3:11564891-11710537	0	-	11564891	11703034	789624	4	128,190,77,71,	0,36941,138079,145575,
#Partially deleted in new
chr3	11564914	11610504	chr3:11564914-11610504	0	-	11564914	11601909	789624	3	105,190,249,	0,36918,45341,
#Partially deleted in new
chr3	11601909	11771350	chr3:11601909-11771350	0	-	11601909	11703034	789624	6	113,77,223,109,98,108,	0,101061,118484,119280,119926,169333,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	11601991	11633671	chr3:11601991-11633671	0	-	11601991	11601991	8553170	2	31,555,	0,31125,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	11607183	11610748	chr3:11607183-11610748	3	+	11607183	11607183	8553170	2	217,363,	0,3202,
#Deleted in new
chr3	11611601	11612197	chr3:11611601-11612197	3	+	11611601	11611601	8553170	1	596,	0,
#Deleted in new
chr3	11702695	11703034	chr3:11702695-11703034	1	-	11702695	11703034	789624	2	29,64,	0,275,
#Partially deleted in new
chr3	11720455	11724979	chr3:11720455-11724979	0	-	11720455	11720455	8553170	3	161,135,157,	0,1343,4367,
#Partially deleted in new
chr3	11790441	11846919	chr3:11790441-11846919	3	-	11790504	11846636	789624	7	140,166,146,151,93,183,418,	0,19075,26750,39272,48780,53587,56060,
#Partially deleted in new
chr3	11790441	11846772	chr3:11790441-11846772	1	-	11790504	11846636	789624	8	140,63,166,146,151,93,183,271,	0,17391,19075,26750,39272,48780,53587,56060,
#Partially deleted in new
chr3	11790441	11810059	chr3:11790441-11810059	0	-	11790441	11790441	8553170	3	140,63,543,	0,17391,19075,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	11790445	11846881	chr3:11790445-11846881	0	-	11833106	11846636	789624	10	136,63,249,1008,146,151,149,93,183,380,	0,17387,17889,18229,26746,39268,42557,48776,53583,56056,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	11790447	11811559	chr3:11790447-11811559	0	-	11790447	11790447	8553170	3	134,1850,784,	0,17385,20328,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	11790542	11817337	chr3:11790542-11817337	0	-	11817170	11817337	789624	5	39,63,166,122,258,	0,17290,18974,20233,26537,
#Partially deleted in new
chr3	11807293	11846779	chr3:11807293-11846779	1	-	11807410	11846636	789624	7	602,166,146,151,93,183,278,	0,2223,9898,22420,31928,36735,39208,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	11817087	11829910	chr3:11817087-11829910	0	-	11817087	11817087	8553170	3	250,88,197,	0,9630,12626,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	11829755	11846892	chr3:11829755-11846892	0	-	11833106	11846636	789624	6	109,153,149,93,183,391,	0,966,3247,9466,14273,16746,
#Partially deleted in new
chr3	11833025	11846885	chr3:11833025-11846885	0	-	11844907	11846636	789624	5	126,93,183,206,384,	0,6196,11003,11865,13476,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	11843538	11846864	chr3:11843538-11846864	0	-	11843538	11843538	8553170	2	673,363,	0,2963,
#Partially deleted in new
chr3	11844907	11846919	chr3:11844907-11846919	1	-	11844907	11846636	789624	2	189,418,	0,1594,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	11859673	11891172	chr3:11859673-11891172	7	+	11859673	11859673	16724991	14	94,108,31,132,111,110,61,120,74,147,101,116,119,76,	0,457,801,11623,13969,21203,21914,23341,23905,24278,25269,25739,27099,31423,
#Partially deleted in new
chr3	11878829	11879129	chr3:11878829-11879129	7	-	11878829	11878829	16724991	1	300,	0,
#Partially deleted in new
chr3	11900010	11901245	chr3:11900010-11901245	7	+	11900010	11900010	16724991	2	150,132,	0,1103,
#Partially deleted in new
chr3	11906526	11912313	chr3:11906526-11912313	7	+	11906526	11906526	16724991	3	149,410,69,	0,396,5718,
#Partially deleted in new
chr3	11909633	11910765	chr3:11909633-11910765	7	-	11909633	11909633	16724991	3	210,63,78,	0,241,1054,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	11952787	11953085	chr3:11952787-11953085	3	-	11952787	11952787	8553170	1	298,	0,
#Partially deleted in new
chr3	12004401	12191400	chr3:12004401-12191400	3	+	12004551	12190625	789624	13	527,58,92,157,90,63,143,75,103,150,61,244,911,	0,136249,137503,141277,146835,157144,157610,162832,163974,165355,178910,182967,186088,
#Partially deleted in new
chr3	12004405	12185728	chr3:12004405-12185728	1	+	12004551	12183440	789624	11	523,58,92,157,90,63,143,75,103,150,2417,	0,136245,137499,141273,146831,157140,157606,162828,163970,165351,178906,
#Partially deleted in new
chr3	12070194	12071360	chr3:12070194-12071360	7	+	12070194	12070194	16724991	1	1166,	0,
#Partially deleted in new
chr3	12071557	12151323	chr3:12071557-12151323	0	+	12071557	12071557	8553170	5	126,58,92,157,87,	0,69093,70347,74121,79679,
#Partially deleted in new
chr3	12148556	12191385	chr3:12148556-12191385	0	+	12148556	12148556	8553170	10	135,90,231,143,75,103,150,61,244,896,	0,2680,12989,13455,18677,19819,21200,34755,38812,41933,
#Partially deleted in new
chr3	12153050	12159351	chr3:12153050-12159351	3	-	12153514	12158840	789624	5	662,125,115,98,650,	0,1276,3769,4334,5651,
#Partially deleted in new
chr3	12158648	12168421	chr3:12158648-12168421	0	+	12158648	12158648	8553170	5	223,63,143,75,46,	0,2897,3363,8585,9727,
#Partially deleted in new
chr3	12161544	12185377	chr3:12161544-12185377	0	+	12161544	12183440	789624	7	64,143,75,103,150,273,1548,	0,467,5689,6831,8212,21767,22285,
#Deleted in new
chr3	12165298	12165642	chr3:12165298-12165642	7	-	12165298	12165298	16724991	1	344,	0,
#Partially deleted in new
chr3	12257800	12258460	chr3:12257800-12258460	7	-	12257800	12257800	16724991	1	660,	0,
#Partially deleted in new
chr3	12287367	12434344	chr3:12287367-12434344	1	+	12379705	12434145	0	8	308,74,228,170,139,200,451,447,	0,25012,92336,93954,105246,118514,129336,146530,
#Partially deleted in new
chr3	12287387	12381491	chr3:12287387-12381491	0	+	12379705	12381491	789624	3	288,228,170,	0,92316,93934,
#Partially deleted in new
chr3	12287859	12434344	chr3:12287859-12434344	1	+	12379705	12434145	0	8	161,74,228,170,139,200,451,447,	0,24520,91844,93462,104754,118022,128844,146038,
#Partially deleted in new
chr3	12287900	12434311	chr3:12287900-12434311	1	+	12379705	12434145	0	7	120,228,170,139,200,451,414,	0,91803,93421,104713,117981,128803,145997,
#Partially deleted in new
chr3	12287942	12434162	chr3:12287942-12434162	1	+	12379705	12434145	0	9	78,74,88,228,170,139,200,451,265,	0,24437,56864,91761,93379,104671,117939,128761,145955,
#Partially deleted in new
chr3	12287982	12434162	chr3:12287982-12434162	1	+	12379705	12434145	0	9	38,329,74,228,170,139,200,451,265,	0,13538,24397,91721,93339,104631,117899,128721,145915,
#Partially deleted in new
chr3	12287986	12434162	chr3:12287986-12434162	1	+	12379705	12434145	0	10	34,72,329,74,228,170,139,200,451,265,	0,9882,13534,24393,91717,93335,104627,117895,128717,145911,
#Partially deleted in new
chr3	12288837	12434344	chr3:12288837-12434344	1	+	12379705	12434145	0	8	297,74,228,170,139,200,451,447,	0,23542,90866,92484,103776,117044,127866,145060,
#Partially deleted in new
chr3	12288837	12379834	chr3:12288837-12379834	0	+	12379705	12379834	789624	2	297,131,	0,90866,
#Partially deleted in new
chr3	12289070	12434339	chr3:12289070-12434339	1	+	12372095	12434145	789624	9	64,74,261,228,170,139,200,451,442,	0,23309,82780,90633,92251,103543,116811,127633,144827,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	12289110	12406846	chr3:12289110-12406846	0	+	12289110	12289110	8553170	6	24,74,228,170,139,965,	0,23269,90593,92211,103503,116771,
#Partially deleted in new
chr3	12305772	12381392	chr3:12305772-12381392	0	+	12379705	12381392	789624	4	187,74,228,71,	0,6607,73931,75549,
#Partially deleted in new
chr3	12312387	12434216	chr3:12312387-12434216	1	+	12379705	12433915	789624	6	66,228,170,139,200,319,	0,67316,68934,80226,93494,121510,
#Deleted in new
chr3	12328002	12328274	chr3:12328002-12328274	7	+	12328002	12328002	16724991	1	272,	0,
#Partially deleted in new
chr3	12351471	12434356	chr3:12351471-12434356	3	+	12351592	12434145	0	7	203,228,170,139,200,451,459,	0,28232,29850,41142,54410,65232,82426,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	12351471	12406846	chr3:12351471-12406846	0	+	12351471	12351471	8553170	5	203,228,170,139,965,	0,28232,29850,41142,54410,
#Partially deleted in new
chr3	12351568	12434344	chr3:12351568-12434344	0	+	12351592	12371891	789624	8	106,261,228,170,139,200,451,447,	0,20282,28135,29753,41045,54313,65135,82329,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	12379705	12417154	chr3:12379705-12417154	0	+	12379705	12399373	0	6	226,170,139,143,200,451,	0,1616,12908,19642,26176,36998,
#Partially deleted in new
chr3	12484431	12528924	chr3:12484431-12528924	0	+	12489800	12528924	789624	9	86,206,82,37,523,78,51,139,37,	0,5352,7704,12086,18830,20722,32179,34627,44456,
#Partially deleted in new
chr3	12484442	12533317	chr3:12484442-12533317	1	+	12489800	12532721	789624	13	75,206,82,37,208,138,78,51,139,37,112,90,656,	0,5341,7693,12075,18819,19204,20711,32168,34616,44445,45319,47127,48219,
#Partially deleted in new
chr3	12484490	12533317	chr3:12484490-12533317	3	+	12489800	12532721	789624	12	138,206,82,37,523,78,51,139,37,112,90,656,	0,5293,7645,12027,18771,20663,32120,34568,44397,45271,47079,48171,
#Partially deleted in new
chr3	12484510	12533317	chr3:12484510-12533317	1	+	12489800	12532721	789624	12	370,206,82,37,523,78,51,139,37,112,90,656,	0,5273,7625,12007,18751,20643,32100,34548,44377,45251,47059,48151,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	12484510	12531013	chr3:12484510-12531013	1	+	12489800	12529912	789624	9	370,206,82,37,523,51,139,37,1252,	0,5273,7625,12007,18751,32100,34548,44377,45251,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	12484510	12539623	chr3:12484510-12539623	0	+	12484510	12484510	8553170	11	370,206,82,37,523,51,139,37,1898,112,463,	0,5273,7625,12007,18751,32100,34548,44377,45251,48151,54650,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	12489779	12533659	chr3:12489779-12533659	1	+	12489800	12532721	789624	10	210,82,37,523,51,139,37,112,90,998,	0,2356,6738,13482,26831,29279,39108,39982,41790,42882,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	12503445	12505574	chr3:12503445-12505574	0	+	12503445	12503445	8553170	2	339,421,	0,1708,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	12511094	12511213	chr3:12511094-12511213	7	-	12511094	12511094	16724991	1	119,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	12514705	12514807	chr3:12514705-12514807	3	+	12514705	12514705	8553170	1	102,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	12514933	12561059	chr3:12514933-12561059	0	-	12514933	12514933	8553170	6	83,91,108,163,50,303,	0,24573,25392,26926,28246,45823,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	12529778	12539288	chr3:12529778-12539288	0	+	12529778	12532721	789624	4	95,90,112,487,	0,1791,2883,9023,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	12529870	12539620	chr3:12529870-12539620	0	+	12529870	12539373	789624	3	3,90,460,	0,1699,9290,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	12530847	12533307	chr3:12530847-12533307	0	+	12530847	12530847	8553170	3	94,90,646,	0,722,1814,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	12539971	12545522	chr3:12539971-12545522	0	-	12542009	12545464	789624	3	462,163,276,	0,1888,5275,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	12539971	12545556	chr3:12539971-12545556	3	-	12540192	12545464	789624	4	462,163,50,310,	0,1888,3208,5275,
#Partially deleted in new
chr3	12553767	12561020	chr3:12553767-12561020	0	-	12553767	12553767	8553170	2	367,264,	0,6989,
#Partially deleted in new
chr3	12557013	12583713	chr3:12557013-12583713	3	+	12557150	12582253	789624	8	163,129,182,305,215,111,145,1598,	0,11861,13057,15055,17778,19617,24794,25102,
#Partially deleted in new
chr3	12557086	12582503	chr3:12557086-12582503	1	+	12557150	12582253	789624	7	90,182,305,215,111,145,388,	0,12984,14982,17705,19544,24721,25029,
#Partially deleted in new
chr3	12557089	12582626	chr3:12557089-12582626	1	+	12557150	12582253	789624	8	87,123,182,305,215,111,145,511,	0,11785,12981,14979,17702,19541,24718,25026,
#Partially deleted in new
chr3	12583600	12664226	chr3:12583600-12664226	3	-	12584513	12618721	0	17	1057,135,132,119,47,177,85,118,128,28,154,99,158,103,113,233,414,	0,1246,1521,2080,3990,7197,8107,16090,16551,16787,20535,22600,25165,25632,28349,34914,80212,
#Partially deleted in new
chr3	12583797	12664148	chr3:12583797-12664148	1	-	12584513	12618721	0	18	860,135,132,119,47,177,85,118,128,28,60,154,99,158,103,113,233,336,	0,1049,1324,1883,3793,7000,7910,15893,16354,16590,19680,20338,22403,24968,25435,28152,34717,80015,
#Partially deleted in new
chr3	12584266	12612005	chr3:12584266-12612005	0	-	12584513	12612005	789624	14	391,135,132,119,47,177,85,118,128,28,154,158,103,56,	0,580,855,1414,3324,6531,7441,15424,15885,16121,19869,24499,24966,27683,
#Partially deleted in new
chr3	12584332	12664125	chr3:12584332-12664125	0	-	12609332	12618721	789624	16	325,135,132,119,47,177,85,118,128,28,154,99,158,103,233,313,	0,514,789,1348,3258,6465,7375,15358,15819,16055,19803,21868,24433,24900,34182,79480,
#Deleted in new
chr3	12584345	12585905	chr3:12584345-12585905	0	-	12584345	12584345	8553170	4	312,135,132,225,	0,501,776,1335,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	12586846	12604213	chr3:12586846-12604213	0	-	12586846	12586846	8553170	8	791,177,85,113,118,128,28,78,	0,3951,4861,12266,12844,13305,13541,17289,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	12587576	12592068	chr3:12587576-12592068	0	-	12587576	12587576	8553170	3	61,177,361,	0,3221,4131,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	12587978	12591916	chr3:12587978-12591916	0	-	12587978	12587978	8553170	2	2996,209,	0,3729,
#Partially deleted in new
chr3	12590640	12599755	chr3:12590640-12599755	0	-	12590640	12590640	8553170	3	334,85,65,	0,1067,9050,
#Partially deleted in new
chr3	12600198	12608867	chr3:12600198-12608867	0	-	12600198	12600198	8553170	4	217,154,99,102,	0,3937,6002,8567,
#Partially deleted in new
chr3	12604134	12664125	chr3:12604134-12664125	0	-	12609332	12618721	789624	5	155,158,103,233,313,	0,4631,5098,14380,59678,
#Partially deleted in new
chr3	12608445	12612001	chr3:12608445-12612001	0	-	12608445	12608445	8553170	3	478,103,52,	0,787,3504,
#Deleted in new
chr3	12673698	12673883	chr3:12673698-12673883	7	+	12673698	12673698	16724991	1	185,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	12733524	12759539	chr3:12733524-12759539	1	-	12734773	12749832	789624	12	1269,63,75,72,48,33,36,54,90,138,81,349,	0,2030,3053,3239,4182,4611,5028,8929,10375,15130,16235,25666,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	12733557	12759277	chr3:12733557-12759277	1	-	12734773	12749832	789624	10	1236,63,75,72,48,33,36,54,81,87,	0,1997,3020,3206,4149,4578,4995,8896,16202,25633,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	12733915	12759259	chr3:12733915-12759259	1	-	12734773	12749832	789624	11	878,63,75,72,48,33,36,54,138,81,69,	0,1639,2662,2848,3791,4220,4637,8538,14739,15844,25275,
#Partially deleted in new
chr3	12734636	12742517	chr3:12734636-12742517	0	-	12734773	12742517	789624	5	157,63,75,72,64,	0,918,1941,2127,7817,
#Partially deleted in new
chr3	12734636	12741356	chr3:12734636-12741356	0	-	12734636	12734636	8553170	8	157,63,75,72,48,33,36,113,	0,918,1941,2127,3070,3499,3916,6607,
#Partially deleted in new
chr3	12734658	12737868	chr3:12734658-12737868	0	-	12734658	12734658	8553170	5	135,63,75,72,162,	0,896,1919,2105,3048,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	12734706	12769457	chr3:12734706-12769457	3	-	12734773	12749832	789624	12	87,63,75,72,48,33,36,54,90,138,81,207,	0,848,1871,2057,3000,3429,3846,7747,9193,13948,15053,34544,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	12737517	12739209	chr3:12737517-12739209	0	-	12737517	12737517	8553170	3	237,33,657,	0,618,1035,
#Partially deleted in new
chr3	12787392	12788671	chr3:12787392-12788671	7	-	12787392	12787392	16724991	1	1279,	0,
#Partially deleted in new
chr3	12796471	12834802	chr3:12796471-12834802	1	+	12796720	12833982	789624	13	317,144,266,106,143,293,142,1503,96,98,165,108,1048,	0,7016,13587,16518,16774,18669,19395,19902,23614,29070,30968,34993,37283,
#Partially deleted in new
chr3	12796671	12813092	chr3:12796671-12813092	0	+	12796720	12810038	789624	4	117,144,407,103,	0,6816,13246,16318,
#Partially deleted in new
chr3	12796679	12834803	chr3:12796679-12834803	3	+	12796720	12833982	789624	15	109,144,155,124,266,106,143,293,142,1503,96,170,165,108,1049,	0,6808,10626,11530,13379,16310,16566,18461,19187,19694,23406,28790,30760,34785,37075,
#Partially deleted in new
chr3	12796685	12834804	chr3:12796685-12834804	0	+	12796720	12806446	8553170	16	103,144,108,155,124,266,106,143,293,142,1503,96,170,165,108,1050,	0,6802,9703,10620,11524,13373,16304,16560,18455,19181,19688,23400,28784,30754,34779,37069,
#Partially deleted in new
chr3	12796720	12810038	chr3:12796720-12810038	1	+	12796720	12810038	789624	3	68,144,121,	0,6767,13197,
#Partially deleted in new
chr3	12807132	12810153	chr3:12807132-12810153	0	+	12807132	12807132	8553170	3	328,124,95,	0,1077,2926,
#Partially deleted in new
chr3	12827445	12871916	chr3:12827445-12871916	0	+	12827445	12871758	789624	4	159,108,202,181,	0,4019,23213,44290,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	12832218	12832728	chr3:12832218-12832728	3	-	12832218	12832218	8553170	1	510,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	12834484	12841588	chr3:12834484-12841588	3	-	12836093	12840237	0	4	1739,182,101,95,	0,4864,5657,7009,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	12834945	12841582	chr3:12834945-12841582	1	-	12836093	12840237	0	4	1278,182,200,89,	0,4403,5196,6548,
#Partially deleted in new
chr3	12836046	12841546	chr3:12836046-12841546	1	-	12836093	12840237	789624	4	177,236,101,53,	0,3302,4095,5447,
#Partially deleted in new
chr3	12836049	12841545	chr3:12836049-12841545	1	-	12836093	12840237	0	4	174,182,212,52,	0,3299,4092,5444,
#Partially deleted in new
chr3	12836059	12841529	chr3:12836059-12841529	1	-	12836093	12840237	0	3	164,182,1388,	0,3289,4082,
#Partially deleted in new
chr3	12836101	12841544	chr3:12836101-12841544	0	-	12836101	12840237	789624	4	122,182,200,51,	0,3247,4040,5392,
#Deleted in new
chr3	12839050	12841543	chr3:12839050-12841543	0	-	12839050	12839050	8553170	3	480,101,50,	0,1091,2443,
#Deleted in new
chr3	12839440	12840882	chr3:12839440-12840882	0	-	12839440	12840237	789624	3	90,101,248,	0,701,1194,
#Deleted in new
chr3	12840311	12840450	chr3:12840311-12840450	3	-	12840311	12840311	789624	1	139,	0,
#Deleted in new
chr3	12850658	12850860	chr3:12850658-12850860	7	+	12850658	12850658	16724991	1	202,	0,
#Partially deleted in new
chr3	12897219	12967668	chr3:12897219-12967668	3	-	12899389	12967451	0	14	2215,50,177,162,100,126,30,140,167,123,162,1250,295,282,	0,5553,11129,12053,14409,16208,17884,18374,23210,24900,27361,38228,44351,70167,
#Partially deleted in new
chr3	12897219	13022596	chr3:12897219-13022596	1	-	12899389	13022100	789624	14	2215,50,177,162,100,126,30,140,167,123,162,1250,295,564,	0,5553,11129,12053,14409,16208,17884,18374,23210,24900,27361,38228,44351,124813,
#Partially deleted in new
chr3	12900576	12987036	chr3:12900576-12987036	1	-	12901508	12936691	789624	13	946,177,162,100,126,30,140,167,123,162,1250,295,66,	0,7772,8696,11052,12851,14527,15017,19853,21543,24004,34871,40994,86394,
#Partially deleted in new
chr3	12900752	13283281	chr3:12900752-13283281	1	-	12900982	13282982	8553170	16	770,50,177,162,100,126,30,140,167,123,162,1250,295,45,30,571,	0,2020,7596,8520,10876,12675,14351,14841,19677,21367,23828,34695,40818,146725,263351,381958,
#Partially deleted in new
chr3	12900848	13073117	chr3:12900848-13073117	1	-	12900982	13073014	789624	14	674,50,177,162,100,126,30,140,167,123,162,1250,295,126,	0,1924,7500,8424,10780,12579,14255,14745,19581,21271,23732,34599,40722,172143,
#Partially deleted in new
chr3	12908348	12994384	chr3:12908348-12994384	0	-	12908348	12936691	8553170	12	177,162,100,126,30,140,167,123,162,1250,295,304,	0,924,3280,5079,6755,7245,12081,13771,16232,27099,33222,85732,
#Partially deleted in new
chr3	12913458	13042440	chr3:12913458-13042440	0	-	12913458	13042363	789624	9	95,30,140,167,123,162,1250,295,154,	0,1645,2135,6971,8661,11122,21989,28112,128828,
#Partially deleted in new
chr3	12936550	12995126	chr3:12936550-12995126	0	-	12936550	12936550	8553170	3	147,295,103,	0,5020,58473,
#Partially deleted in new
chr3	12960276	12967460	chr3:12960276-12967460	0	-	12960276	12960276	8553170	2	362,74,	0,7110,
#Deleted in new
chr3	13052966	13053122	chr3:13052966-13053122	7	-	13052966	13052966	16724991	1	156,	0,
#Partially deleted in new
chr3	13316234	13420309	chr3:13316234-13420309	3	-	13317680	13420226	789624	40	1547,84,96,217,251,147,124,137,221,176,175,92,159,132,81,180,63,136,128,129,102,105,107,193,174,222,146,199,156,138,141,107,69,159,133,151,97,132,137,250,	0,2837,2995,3528,5350,5958,7074,9560,10982,12536,14225,16058,19219,20552,21602,23619,24001,25513,25761,26940,35644,35845,37319,37680,41987,44035,49711,55599,57483,59269,60056,61221,62677,63328,70040,72068,74976,81122,83490,103825,
#Deleted in new
chr3	13336808	13341141	chr3:13336808-13341141	0	-	13336808	13336808	8553170	3	221,180,73,	0,3045,4260,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	13351660	13354694	chr3:13351660-13354694	0	-	13351660	13351660	8553170	4	320,105,107,780,	0,419,1893,2254,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr3	13351662	13420309	chr3:13351662-13420309	0	-	13351662	13351662	8553170	20	318,105,107,193,174,222,146,199,156,138,141,107,69,159,133,151,97,132,137,250,	0,417,1891,2252,6559,8607,14283,20171,22055,23841,24628,25793,27249,27900,34612,36640,39548,45694,48062,68397,
#Deleted in new
chr3	13460293	13460398	chr3:13460293-13460398	7	-	13460293	13460293	16724991	1	105,	0,
#Deleted in new
chr3	13460423	13460889	chr3:13460423-13460889	7	-	13460423	13460423	16724991	1	466,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	13476981	13480053	chr3:13476981-13480053	3	-	13476981	13476981	789624	2	104,411,	0,2661,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	13479723	13505334	chr3:13479723-13505334	1	+	13481327	13504477	789624	9	393,149,101,117,77,63,97,179,867,	0,1522,3740,17012,20989,22147,23160,24370,24744,
#Partially deleted in new
chr3	13480164	13506416	chr3:13480164-13506416	3	+	13480347	13504683	789624	10	185,149,101,117,43,77,63,97,179,1949,	0,1081,3299,16571,18348,20548,21706,22719,23929,24303,
#Partially deleted in new
chr3	13480214	13506424	chr3:13480214-13506424	1	+	13481327	13504477	789624	9	135,149,101,117,77,63,97,179,1957,	0,1031,3249,16521,20498,21656,22669,23879,24253,
#Partially deleted in new
chr3	13480281	13505071	chr3:13480281-13505071	1	+	13480347	13504683	789624	4	68,149,179,604,	0,964,23812,24186,
#Partially deleted in new
chr3	13480302	13504849	chr3:13480302-13504849	1	+	13480347	13504683	789624	7	47,149,101,63,97,179,382,	0,943,3161,21568,22581,23791,24165,
#Partially deleted in new
chr3	13480305	13504956	chr3:13480305-13504956	0	+	13480347	13501881	789624	6	44,149,63,97,179,489,	0,940,21565,22578,23788,24162,
#Partially deleted in new
chr3	13480323	13504882	chr3:13480323-13504882	1	+	13480347	13504683	789624	6	26,149,101,97,179,415,	0,922,3140,22560,23770,24144,
#Partially deleted in new
chr3	13480323	13504589	chr3:13480323-13504589	1	+	13480347	13504477	789624	5	26,149,101,179,122,	0,922,3140,23770,24144,
#Partially deleted in new
chr3	13480332	13501699	chr3:13480332-13501699	0	+	13480332	13480332	8553170	7	17,149,101,117,43,77,70,	0,913,3131,16403,18180,20380,21297,
#Partially deleted in new
chr3	13480343	13504142	chr3:13480343-13504142	0	+	13481327	13504142	789624	9	103,149,101,117,43,77,63,97,49,	0,902,3120,16392,18169,20369,21527,22540,23750,
#Partially deleted in new
chr3	13480375	13504543	chr3:13480375-13504543	1	+	13481327	13504477	789624	5	71,149,101,179,76,	0,870,3088,23718,24092,
#Partially deleted in new
chr3	13480380	13502588	chr3:13480380-13502588	0	+	13480380	13480380	8553170	7	66,149,101,117,43,77,718,	0,865,3083,16355,18132,20332,21490,
#Partially deleted in new
chr3	13480410	13505233	chr3:13480410-13505233	1	+	13481327	13504683	789624	10	36,149,101,48,43,77,63,97,179,766,	0,835,3053,16394,18102,20302,21460,22473,23683,24057,
#Partially deleted in new
chr3	13480456	13496748	chr3:13480456-13496748	0	+	13480714	13496748	789624	4	317,149,101,13,	0,789,3007,16279,
#Partially deleted in new
chr3	13480699	13502939	chr3:13480699-13502939	0	+	13480714	13502939	789624	6	74,149,101,77,63,56,	0,546,2764,20013,21171,22184,
#Partially deleted in new
chr3	13480796	13496842	chr3:13480796-13496842	0	+	13481327	13496842	789624	4	223,149,101,107,	0,449,2667,15939,
#Partially deleted in new
chr3	13481094	13502913	chr3:13481094-13502913	0	+	13481327	13502913	789624	7	300,101,117,43,77,63,30,	0,2369,15641,17418,19618,20776,21789,
#Partially deleted in new
chr3	13481245	13506407	chr3:13481245-13506407	1	+	13481327	13504683	789624	9	149,101,117,43,77,63,97,179,1940,	0,2218,15490,17267,19467,20625,21638,22848,23222,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	13481381	13503239	chr3:13481381-13503239	0	+	13481381	13481381	8553170	5	13,101,77,63,356,	0,2082,19331,20489,21502,
#Partially deleted in new
chr3	13496587	13504113	chr3:13496587-13504113	0	+	13496587	13496587	8553170	6	265,43,77,63,97,20,	0,1925,4125,5283,6296,7506,
#Partially deleted in new
chr3	13496825	13502948	chr3:13496825-13502948	0	+	13496825	13496825	8553170	4	27,43,63,65,	0,1687,5045,6058,
#Partially deleted in new
chr3	13549130	13638422	chr3:13549130-13638422	3	+	13570355	13637919	789624	18	78,1347,112,130,181,210,114,102,141,135,138,144,129,126,117,129,124,861,	0,21184,58931,60382,64853,68945,69773,70599,72644,77314,78701,79774,80033,80689,81568,82198,87314,88431,
#Partially deleted in new
chr3	13549180	13638422	chr3:13549180-13638422	1	+	13570355	13637919	789624	17	28,1347,112,130,181,210,114,102,135,138,144,129,126,117,129,124,861,	0,21134,58881,60332,64803,68895,69723,70549,77264,78651,79724,79983,80639,81518,82148,87264,88381,
#Partially deleted in new
chr3	13566475	13570831	chr3:13566475-13570831	0	+	13570355	13570831	789624	2	67,517,	0,3839,
#Partially deleted in new
chr3	13568739	13638034	chr3:13568739-13638034	1	+	13570355	13637919	789624	18	341,1347,112,130,181,210,114,102,141,135,138,144,129,126,117,129,124,473,	0,1575,39322,40773,45244,49336,50164,50990,53035,57705,59092,60165,60424,61080,61959,62589,67705,68822,
#Deleted in new
chr3	13613897	13618993	chr3:13613897-13618993	0	+	13613897	13613897	8553170	3	267,210,90,	0,4178,5006,
#Deleted in new
chr3	13631328	13638380	chr3:13631328-13638380	0	+	13631328	13638172	789624	3	129,124,284,	0,5116,6768,
#Deleted in new
chr3	13636444	13638407	chr3:13636444-13638407	0	+	13636444	13638285	789624	3	124,11,292,	0,1117,1671,
#Partially deleted in new
chr3	13650695	13746629	chr3:13650695-13746629	0	+	13650695	13650695	8553170	2	138,386,	0,95548,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	13816257	13880121	chr3:13816257-13880121	3	-	13818943	13879816	0	4	3166,272,227,376,	0,38274,58689,63488,
#Partially deleted in new
chr3	13863667	13875113	chr3:13863667-13875113	0	-	13863667	13863667	8553170	2	234,167,	0,11279,
#Deleted in new
chr3	13874945	13877220	chr3:13874945-13877220	0	-	13874945	13874945	8553170	3	228,52,251,	0,958,2024,
#Deleted in new
chr3	13926812	13927778	chr3:13926812-13927778	7	+	13926812	13926812	16724991	1	966,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	13933055	13936944	chr3:13933055-13936944	7	+	13933055	13933055	16724991	2	568,2806,	0,1083,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	13934254	13937477	chr3:13934254-13937477	5	+	13934254	13934254	16724991	3	1236,767,495,	0,1664,2728,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	13937272	14064237	chr3:13937272-14064237	5	+	13937272	13937272	16724991	5	207,111,93,130,213,	0,17933,18289,126106,126752,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	13937378	14064212	chr3:13937378-14064212	4	+	13937378	13937378	16724991	4	101,109,130,193,	0,90897,126000,126641,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	13937395	14064328	chr3:13937395-14064328	4	+	13937395	13937395	16724991	4	84,109,47,309,	0,90880,119742,126624,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	13937400	14065985	chr3:13937400-14065985	4	+	13937400	13937400	16724991	3	79,130,1961,	0,125978,126624,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	14002423	14064305	chr3:14002423-14064305	4	+	14002423	14002423	16724991	3	186,130,281,	0,60955,61601,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	14017552	14065984	chr3:14017552-14065984	4	+	14017552	14017552	16724991	4	113,47,130,1965,	0,39585,45826,46467,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	14019699	14064625	chr3:14019699-14064625	4	+	14019699	14019699	16724991	5	40,109,47,130,606,	0,8576,37438,43679,44320,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	14048201	14064238	chr3:14048201-14064238	4	+	14048201	14048201	16724991	3	164,130,214,	0,15177,15823,
#Deleted in new
chr3	14064202	14065442	chr3:14064202-14065442	5	+	14064202	14064202	16724991	2	71,580,	0,660,
#Partially deleted in new
chr3	14089106	14089871	chr3:14089106-14089871	7	-	14089106	14089106	16724991	1	765,	0,
#Partially deleted in new
chr3	14112076	14124870	chr3:14112076-14124870	3	-	14112886	14121977	0	4	1118,99,170,216,	0,4349,9840,12578,
#Partially deleted in new
chr3	14112092	14124858	chr3:14112092-14124858	1	-	14112886	14124676	0	3	1102,99,204,	0,4333,12562,
#Partially deleted in new
chr3	14113143	14124749	chr3:14113143-14124749	0	-	14113143	14113143	8553170	5	51,99,169,170,95,	0,3282,6001,8773,11511,
#Partially deleted in new
chr3	14124939	14143679	chr3:14124939-14143679	3	+	14125193	14141795	789624	12	266,150,135,95,50,70,71,122,75,102,118,2087,	0,4472,5882,6640,7606,7926,8799,9830,10218,10867,14240,16653,
#Partially deleted in new
chr3	14125014	14132921	chr3:14125014-14132921	0	+	14125193	14129043	789624	7	191,231,150,135,95,50,56,	0,3840,4397,5807,6565,7531,7851,
#Partially deleted in new
chr3	14135216	14148005	chr3:14135216-14148005	3	+	14135216	14145485	789624	5	16,102,118,362,55,	0,590,3963,10105,12734,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	14137143	14148048	chr3:14137143-14148048	0	+	14137143	14137143	8553170	5	88,121,118,362,98,	0,704,2036,8178,10807,
#Partially deleted in new
chr3	14141727	14148252	chr3:14141727-14148252	0	+	14141727	14141727	8553170	3	226,362,298,	0,3594,6227,
#Deleted in new
chr3	14144636	14148423	chr3:14144636-14148423	1	+	14144636	14144636	8553170	3	459,135,473,	0,685,3314,
#Deleted in new
chr3	14144722	14148162	chr3:14144722-14148162	0	+	14144722	14144722	8553170	3	373,362,212,	0,599,3228,
#Partially deleted in new
chr3	14145146	14178783	chr3:14145146-14178783	3	-	14145940	14178568	0	16	1013,90,94,170,135,82,161,882,90,121,158,85,124,113,196,318,	0,2143,2761,3415,3667,7188,11188,12864,14594,19666,20281,22022,23110,25291,27720,33319,
#Deleted in new
chr3	14145369	14147510	chr3:14145369-14147510	0	+	14145369	14145369	8553170	2	314,234,	0,1907,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	14145369	14151660	chr3:14145369-14151660	0	+	14145369	14145369	8553170	4	314,747,156,297,	0,2585,4472,5994,
#Partially deleted in new
chr3	14145369	14159892	chr3:14145369-14159892	0	+	14145369	14145369	8553170	2	87,167,	0,14356,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	14145372	14151656	chr3:14145372-14151656	0	+	14145372	14145372	8553170	3	84,156,293,	0,4469,5991,
#Deleted in new
chr3	14145372	14148252	chr3:14145372-14148252	0	+	14145372	14145372	8553170	2	592,298,	0,2582,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	14145372	14159891	chr3:14145372-14159891	0	+	14145372	14145372	8553170	3	311,156,166,	0,4469,14353,
#Deleted in new
chr3	14145372	14148531	chr3:14145372-14148531	0	+	14145372	14145372	8553170	2	84,577,	0,2582,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	14145372	14151657	chr3:14145372-14151657	0	+	14145372	14145372	8553170	3	311,156,294,	0,4469,5991,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	14145377	14152971	chr3:14145377-14152971	0	+	14145377	14145377	8553170	5	79,156,78,63,293,	0,4464,5986,7002,7301,
#Partially deleted in new
chr3	14145728	14178601	chr3:14145728-14178601	0	-	14167242	14178568	0	15	431,90,94,170,135,82,161,882,90,121,158,85,113,196,136,	0,1561,2179,2833,3085,6606,10606,12282,14012,19084,19699,21440,24709,27138,32737,
#Deleted in new
chr3	14147466	14148928	chr3:14147466-14148928	0	-	14147466	14147466	8553170	3	535,170,115,	0,1095,1347,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	14148285	14152878	chr3:14148285-14152878	1	+	14148285	14148285	8553170	5	416,156,78,63,200,	0,1556,3078,4094,4393,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	14148401	14165978	chr3:14148401-14165978	3	+	14148401	14148401	8553170	3	300,156,103,	0,1440,17474,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	14149841	14153449	chr3:14149841-14153449	0	+	14149841	14149841	8553170	3	156,63,771,	0,2538,2837,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	14149862	14152800	chr3:14149862-14152800	1	+	14149862	14149862	8553170	3	135,171,122,	0,2409,2816,
#Partially deleted in new
chr3	14158806	14167267	chr3:14158806-14167267	0	-	14158806	14158806	8553170	5	86,90,121,158,99,	0,934,6006,6621,8362,
#Partially deleted in new
chr3	14164365	14170460	chr3:14164365-14170460	0	-	14164365	14164365	8553170	5	568,158,85,124,23,	0,1062,2803,3891,6072,
#Partially deleted in new
chr3	14164906	14170614	chr3:14164906-14170614	0	-	14164906	14164906	8553170	5	27,158,85,124,177,	0,521,2262,3350,5531,
#Partially deleted in new
chr3	14168270	14178621	chr3:14168270-14178621	0	-	14168270	14178568	789624	4	110,113,196,138,	0,2167,4596,10213,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	14178357	14201119	chr3:14178357-14201119	3	+	14178860	14198116	0	4	524,111,96,3084,	0,3202,5579,19678,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	14272372	14303845	chr3:14272372-14303845	3	-	14272372	14272372	8553170	2	471,142,	0,31331,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	14348450	14352568	chr3:14348450-14352568	3	-	14348450	14348450	789624	3	323,113,1848,	0,902,2270,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	14394647	14394757	chr3:14394647-14394757	7	+	14394647	14394647	16724991	1	110,	0,
#Partially deleted in new
chr3	14402575	14478901	chr3:14402575-14478901	0	+	14402593	14443726	789624	11	272,42,240,135,235,133,135,104,113,138,436,	0,13836,41048,43141,45006,55374,63940,65277,69629,74629,75890,
#Partially deleted in new
chr3	14402575	14489349	chr3:14402575-14489349	1	+	14402593	14485007	789624	15	272,42,236,135,235,133,135,104,125,113,138,103,101,171,4483,	0,13836,41052,43141,45006,55374,63940,65277,65512,69629,74629,75890,76509,79095,82291,
#Partially deleted in new
chr3	14402575	14489349	chr3:14402575-14489349	0	+	14402593	14472313	789624	14	272,42,236,135,235,133,135,104,113,138,103,101,171,4483,	0,13836,41052,43141,45006,55374,63940,65277,69629,74629,75890,76509,79095,82291,
#Partially deleted in new
chr3	14402575	14489347	chr3:14402575-14489347	3	+	14443634	14485007	789624	15	272,42,240,135,235,133,135,104,125,113,138,103,101,171,4481,	0,13836,41048,43141,45006,55374,63940,65277,65512,69629,74629,75890,76509,79095,82291,
#Partially deleted in new
chr3	14402575	14411323	chr3:14402575-14411323	0	+	14402575	14402575	8553170	2	272,293,	0,8455,
#Partially deleted in new
chr3	14402583	14489307	chr3:14402583-14489307	0	+	14402593	14443726	8553170	15	264,42,240,135,235,133,135,104,125,113,138,103,101,171,4441,	0,13828,41040,43133,44998,55366,63932,65269,65504,69621,74621,75882,76501,79087,82283,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	14402619	14448188	chr3:14402619-14448188	1	+	14443634	14447820	789624	5	228,42,240,135,607,	0,13792,41004,43097,44962,
#Partially deleted in new
chr3	14402620	14444342	chr3:14402620-14444342	0	+	14402620	14402620	8553170	3	227,42,719,	0,13791,41003,
#Partially deleted in new
chr3	14402624	14458061	chr3:14402624-14458061	0	+	14402624	14443726	789624	7	223,42,240,129,135,235,112,	0,13787,40999,42113,43092,44957,55325,
#Partially deleted in new
chr3	14402647	14458026	chr3:14402647-14458026	0	+	14402647	14402647	8553170	5	200,42,135,235,77,	0,13764,43069,44934,55302,
#Partially deleted in new
chr3	14432669	14445816	chr3:14432669-14445816	0	+	14443634	14445816	789624	3	118,240,100,	0,10954,13047,
#Partially deleted in new
chr3	14472241	14484903	chr3:14472241-14484903	0	+	14472241	14484903	789624	3	76,171,37,	0,9429,12625,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr3	14489110	14542081	chr3:14489110-14542081	3	-	14493664	14542081	789624	25	4716,147,144,106,175,180,140,145,146,67,81,146,187,150,126,170,148,146,76,87,146,136,81,122,209,	0,5732,7306,14455,16504,17690,18450,20709,22054,22302,23666,24554,25181,27953,28661,30999,31279,32531,33889,34501,35282,36326,36740,51158,52762,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr3	14489110	14540374	chr3:14489110-14540374	1	-	14493664	14540308	0	24	4716,147,144,106,175,180,140,145,146,67,81,146,187,150,126,170,148,146,76,87,146,136,81,106,	0,5732,7306,14455,16504,17690,18450,20709,22054,22302,23666,24554,25181,27953,28661,30999,31279,32531,33889,34501,35282,36326,36740,51158,
#Partially deleted in new
chr3	14491169	14513678	chr3:14491169-14513678	0	-	14503904	14513678	789624	12	2657,147,144,388,175,180,140,145,146,67,81,14,	0,3673,5247,12396,14445,15631,16391,18650,19995,20243,21607,22495,
#Partially deleted in new
chr3	14493205	14556075	chr3:14493205-14556075	1	-	14493664	14555954	789624	24	621,147,144,106,175,180,140,145,146,67,81,146,187,150,126,170,148,146,76,87,146,136,81,176,	0,1637,3211,10360,12409,13595,14355,16614,17959,18207,19571,20459,21086,23858,24566,26904,27184,28436,29794,30406,31187,32231,32645,62694,
#Partially deleted in new
chr3	14520691	14540343	chr3:14520691-14540343	0	-	14520691	14520691	8553170	5	3007,146,136,81,75,	0,3701,4745,5159,19577,
#Partially deleted in new
chr3	14520691	14525983	chr3:14520691-14525983	0	-	14520691	14520691	8553170	3	3847,136,133,	0,4745,5159,
#Partially deleted in new
chr3	14524392	14556056	chr3:14524392-14556056	0	-	14524392	14555954	789624	4	146,136,81,163,	0,1044,1458,31501,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	14530981	14531088	chr3:14530981-14531088	3	-	14530981	14530981	8553170	1	107,	0,
#Deleted in new
chr3	14572851	14574792	chr3:14572851-14574792	7	-	14572851	14572851	16724991	1	1941,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	14602034	14641443	chr3:14602034-14641443	3	+	14602034	14602034	8553170	3	223,95,1302,	0,33428,38107,
#Deleted in new
chr3	14648193	14649432	chr3:14648193-14649432	3	-	14648193	14648193	8553170	2	376,70,	0,1169,
#Partially deleted in new
chr3	14651745	14672653	chr3:14651745-14672653	1	+	14658907	14671194	789624	13	133,105,101,59,110,24,30,5,31,68,143,153,1758,	0,2680,3783,7125,9784,9898,9923,10096,13277,13310,15059,18188,19150,
#Partially deleted in new
chr3	14651763	14672659	chr3:14651763-14672659	1	+	14651836	14671194	789624	9	115,105,101,59,178,96,143,153,1764,	0,2662,3765,7107,9766,13264,15041,18170,19132,
#Partially deleted in new
chr3	14651763	14672659	chr3:14651763-14672659	3	+	14651836	14671194	789624	11	115,105,101,59,178,96,143,95,133,153,1764,	0,2662,3765,7107,9766,13264,15041,15660,16285,18170,19132,
#Partially deleted in new
chr3	14651763	14661900	chr3:14651763-14661900	0	+	14651763	14651763	8553170	5	115,105,101,59,371,	0,2662,3765,7107,9766,
#Partially deleted in new
chr3	14651772	14667298	chr3:14651772-14667298	0	+	14651772	14651772	8553170	7	106,105,101,59,178,96,494,	0,2653,3756,7098,9757,13255,15032,
#Deleted in new
chr3	14668001	14671027	chr3:14668001-14671027	0	+	14668001	14668001	8553170	3	180,153,132,	0,1932,2894,
#Partially deleted in new
chr3	14675098	14773034	chr3:14675098-14773034	3	+	14682713	14772875	789624	17	154,162,620,141,120,133,282,153,121,132,124,250,304,108,143,135,244,	0,7071,7479,9143,14898,28031,29238,38908,40190,46554,51802,53340,82272,84792,86374,96968,97692,
#Partially deleted in new
chr3	14675140	14773005	chr3:14675140-14773005	1	+	14683079	14772875	789624	17	112,162,223,141,120,133,282,153,121,132,124,250,304,108,143,135,215,	0,7029,7834,9101,14856,27989,29196,38866,40148,46512,51760,53298,82230,84750,86332,96926,97650,
#Partially deleted in new
chr3	14675178	14773034	chr3:14675178-14773034	1	+	14683079	14772875	789624	17	74,57,223,141,120,133,282,153,121,132,124,250,304,108,143,135,244,	0,7096,7796,9063,14818,27951,29158,38828,40110,46474,51722,53260,82192,84712,86294,96888,97612,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	14704354	14722239	chr3:14704354-14722239	0	+	14704354	14704354	8553170	5	264,153,121,132,166,	0,9652,10934,17298,17719,
#Deleted in new
chr3	14764951	14767440	chr3:14764951-14767440	3	-	14764951	14764951	8553170	2	681,466,	0,2023,
#Partially deleted in new
chr3	14791533	14793504	chr3:14791533-14793504	3	+	14791533	14791533	8553170	2	249,952,	0,1019,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	14799330	14811414	chr3:14799330-14811414	3	-	14799330	14799330	789624	3	3691,82,57,	0,3884,12027,
#Partially deleted in new
chr3	14810852	14821624	chr3:14810852-14821624	0	+	14810852	14821624	789624	2	13,2669,	0,8103,
#Partially deleted in new
chr3	14818961	14934388	chr3:14818961-14934388	3	+	14819071	14933167	0	20	2635,133,59,31,161,157,88,51,59,72,69,84,80,100,138,130,131,129,155,1258,	0,45166,61610,61780,78547,78977,79777,81441,82041,88678,91899,98287,99792,102956,103449,104084,105046,107108,113615,114169,
#Partially deleted in new
chr3	14818961	14934565	chr3:14818961-14934565	1	+	14819794	14933167	789624	19	2635,133,59,31,161,157,88,51,59,72,69,84,80,100,138,130,131,155,1435,	0,45166,61610,61780,78547,78977,79777,81441,82041,88678,91899,98287,99792,102956,103449,104084,105046,113615,114169,
#Partially deleted in new
chr3	14821431	14900453	chr3:14821431-14900453	0	+	14821431	14900453	789624	6	165,133,161,157,88,51,	0,42696,76077,76507,77307,78971,
#Partially deleted in new
chr3	14882304	14933438	chr3:14882304-14933438	0	+	14882304	14882304	8553170	17	50,161,157,88,51,59,72,69,84,80,100,138,130,131,129,155,308,	0,15204,15634,16434,18098,18698,25335,28556,34944,36449,39613,40106,40741,41703,43765,50272,50826,
#Partially deleted in new
chr3	14896961	14933439	chr3:14896961-14933439	0	+	14896961	14896961	8553170	17	285,161,157,88,51,59,72,69,84,80,100,138,130,131,129,155,309,	0,547,977,1777,3441,4041,10678,13899,20287,21792,24956,25449,26084,27046,29108,35615,36169,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	14920346	14948424	chr3:14920346-14948424	3	-	14920346	14920346	8553170	6	137,151,104,258,122,412,	0,962,1954,2744,3630,27666,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	14930762	14933438	chr3:14930762-14933438	0	+	14930762	14930762	8553170	2	1969,308,	0,2368,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	14942783	14947507	chr3:14942783-14947507	1	-	14942783	14942783	789624	2	3371,421,	0,4303,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	14944679	14947893	chr3:14944679-14947893	0	-	14944679	14944679	789624	2	1475,155,	0,3059,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	14944692	14948424	chr3:14944692-14948424	0	-	14944692	14944692	789624	2	1462,412,	0,3320,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	14945023	14947505	chr3:14945023-14947505	0	-	14945023	14945023	8553170	2	1131,396,	0,2086,
#Partially deleted in new
chr3	14947583	15013718	chr3:14947583-15013718	0	+	15003914	15013718	789624	3	323,111,130,	0,56292,66005,
#Partially deleted in new
chr3	14947583	15043349	chr3:14947583-15043349	3	+	15003914	15043008	0	14	323,111,201,103,180,148,94,134,178,122,140,138,106,516,	0,56292,66005,68568,73169,75616,76531,81002,82691,84795,87086,90416,91538,95250,
#Partially deleted in new
chr3	14947704	15004592	chr3:14947704-15004592	0	+	15003914	15004592	789624	5	202,40,106,111,36,	0,11452,11831,56171,56852,
#Partially deleted in new
chr3	14947728	15043349	chr3:14947728-15043349	1	+	15003914	15043008	0	15	178,111,57,201,103,180,148,94,134,178,122,140,138,106,516,	0,56147,56828,65860,68423,73024,75471,76386,80857,82546,84650,86941,90271,91393,95105,
#Partially deleted in new
chr3	14948631	15043349	chr3:14948631-15043349	0	+	14948631	14948631	8553170	14	96,111,57,201,103,180,148,94,134,178,122,140,1228,516,	0,55244,55925,64957,67520,72121,74568,75483,79954,81643,83747,86038,89368,94202,
#Partially deleted in new
chr3	14962406	15043029	chr3:14962406-15043029	1	+	15003914	15043008	0	14	86,111,201,103,180,148,94,134,178,122,140,138,106,196,	0,41469,51182,53745,58346,60793,61708,66179,67868,69972,72263,75593,76715,80427,
#Partially deleted in new
chr3	14962408	15020935	chr3:14962408-15020935	0	+	15003914	15020935	789624	6	84,111,57,201,103,183,	0,41467,42148,51180,53743,58344,
#Partially deleted in new
chr3	15003914	15043008	chr3:15003914-15043008	1	+	15003914	15043008	0	13	72,201,103,180,148,94,134,178,122,140,138,106,175,	0,9674,12237,16838,19285,20200,24671,26360,28464,30755,34085,35207,38919,
#Partially deleted in new
chr3	15003914	15049273	chr3:15003914-15049273	1	+	15003914	15043008	0	14	72,57,201,103,180,148,94,134,178,122,140,138,106,6440,	0,642,9674,12237,16838,19285,20200,24671,26360,28464,30755,34085,35207,38919,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	15025564	15043337	chr3:15025564-15043337	0	+	15025564	15025564	8553170	8	1445,134,178,122,140,138,106,504,	0,3021,4710,6814,9105,12435,13557,17269,
#Partially deleted in new
chr3	15032426	15053600	chr3:15032426-15053600	0	+	15032426	15053571	789624	5	74,140,138,106,240,	0,2243,5573,6695,20934,
#Partially deleted in new
chr3	15034323	15038047	chr3:15034323-15038047	0	+	15034323	15034323	8553170	2	486,48,	0,3676,
#Partially deleted in new
chr3	15034652	15053600	chr3:15034652-15053600	0	+	15034652	15053571	789624	4	157,138,106,150,	0,3347,4469,18798,
#Deleted in new
chr3	15042459	15049967	chr3:15042459-15049967	0	-	15042459	15042459	8553170	2	563,260,	0,7248,
#Deleted in new
chr3	15045098	15050102	chr3:15045098-15050102	0	-	15045098	15045098	8553170	2	145,395,	0,4609,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	15048517	15065335	chr3:15048517-15065335	3	-	15052440	15065194	0	4	4116,88,107,275,	0,4862,10851,16543,
#Partially deleted in new
chr3	15049211	15065260	chr3:15049211-15065260	1	-	15049826	15065194	0	4	724,88,107,200,	0,4168,10157,15849,
#Partially deleted in new
chr3	15049880	15065311	chr3:15049880-15065311	0	-	15053375	15065194	789624	4	55,177,107,251,	0,3410,9488,15180,
#Partially deleted in new
chr3	15051716	15065317	chr3:15051716-15065317	1	-	15052484	15065194	0	3	917,107,257,	0,7652,13344,
#Partially deleted in new
chr3	15052434	15065300	chr3:15052434-15065300	0	-	15053375	15065194	789624	4	199,177,107,240,	0,856,6934,12626,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	15070072	15099148	chr3:15070072-15099148	3	-	15073781	15096120	0	14	4858,105,103,87,71,242,162,46,101,141,316,176,156,114,	0,5533,6989,8002,10659,12294,14662,14927,15788,20326,25900,26462,28046,28962,
#Partially deleted in new
chr3	15073604	15099163	chr3:15073604-15099163	1	-	15073781	15096120	0	13	1326,105,103,87,71,242,162,46,101,141,316,176,129,	0,2001,3457,4470,7127,8762,11130,11395,12256,16794,22368,22930,25430,
#Partially deleted in new
chr3	15074904	15082440	chr3:15074904-15082440	0	-	15075387	15082440	789624	8	26,70,128,105,103,87,71,74,	0,142,385,701,2157,3170,5827,7462,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	15078109	15081560	chr3:15078109-15081560	0	-	15078109	15078109	8553170	4	52,71,280,129,	0,2622,2945,3322,
#Partially deleted in new
chr3	15078156	15099148	chr3:15078156-15099148	0	-	15078156	15078156	8553170	9	5,71,162,46,101,141,316,176,114,	0,2575,6578,6843,7704,12242,17816,18378,20878,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	15082477	15086112	chr3:15082477-15086112	0	-	15082477	15082477	8553170	4	131,162,46,252,	0,2257,2522,3383,
#Partially deleted in new
chr3	15084734	15099133	chr3:15084734-15099133	0	-	15091473	15096120	789624	9	162,46,101,141,155,316,176,156,99,	0,265,1126,5664,6604,11238,11800,13384,14300,
#Partially deleted in new
chr3	15095670	15099143	chr3:15095670-15099143	1	-	15095853	15096120	789624	3	618,176,109,	0,864,3364,
#Partially deleted in new
chr3	15095997	15099136	chr3:15095997-15099136	0	-	15095997	15096120	789624	3	291,176,115,	0,537,3024,
#Partially deleted in new
chr3	15131847	15132208	chr3:15131847-15132208	7	-	15131847	15131847	16724991	1	361,	0,
#Partially deleted in new
chr3	15141379	15142157	chr3:15141379-15142157	7	+	15141379	15141379	16724991	1	778,	0,
#Partially deleted in new
chr3	15151832	15180961	chr3:15151832-15180961	5	-	15151832	15151832	16724991	13	54,93,146,79,335,421,134,546,638,606,589,603,73,	0,1630,1874,3994,5321,9756,12463,13161,18107,21623,22930,25752,29056,
#Partially deleted in new
chr3	15151842	15157318	chr3:15151842-15157318	4	-	15151842	15151842	16724991	5	44,93,146,79,165,	0,1620,1864,3984,5311,
#Partially deleted in new
chr3	15165274	15205959	chr3:15165274-15205959	7	-	15165274	15165274	16724991	5	265,630,589,603,249,	0,4673,9488,12310,40436,
#Partially deleted in new
chr3	15170273	15175103	chr3:15170273-15175103	4	-	15170273	15170273	16724991	3	304,606,341,	0,3182,4489,
#Partially deleted in new
chr3	15206151	15217529	chr3:15206151-15217529	0	+	15206495	15210810	789624	4	446,121,109,105,	0,4650,5952,11273,
#Partially deleted in new
chr3	15206220	15221031	chr3:15206220-15221031	0	+	15206495	15217451	789624	4	377,158,68,251,	0,11204,12252,14560,
#Partially deleted in new
chr3	15206242	15252918	chr3:15206242-15252918	3	+	15206495	15251260	0	21	355,109,158,68,201,87,127,86,94,147,107,121,145,100,136,76,146,63,131,93,1803,	0,5861,11182,12230,14538,17232,21596,22731,24199,26276,27624,28782,34230,34511,35210,35935,39283,40489,41084,44688,44873,
#Partially deleted in new
chr3	15227949	15240595	chr3:15227949-15240595	0	+	15227949	15240595	789624	8	16,86,94,48,147,107,121,123,	0,1024,2492,4161,4569,5917,7075,12523,
#Partially deleted in new
chr3	15240508	15251246	chr3:15240508-15251246	0	+	15240508	15245579	789624	8	109,100,76,146,63,131,49,131,	0,245,1669,5017,6223,6818,10466,10607,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	15245886	15252302	chr3:15245886-15252302	0	+	15245886	15245886	8553170	4	908,131,93,1187,	0,1440,5044,5229,
#Partially deleted in new
chr3	15247236	15251302	chr3:15247236-15251302	0	+	15247236	15247236	8553170	3	221,93,187,	0,3694,3879,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	15254183	15264493	chr3:15254183-15264493	1	+	15254183	15254183	789624	3	3423,1949,198,	0,4450,10112,
#Partially deleted in new
chr3	15254852	15332629	chr3:15254852-15332629	1	-	15256085	15332408	0	9	1451,261,220,43,131,165,129,63,359,	0,2000,3978,4908,7306,14860,49250,75651,77418,
#Partially deleted in new
chr3	15255003	15332556	chr3:15255003-15332556	0	-	15258847	15332408	789624	4	1300,261,53,286,	0,1849,3827,77267,
#Partially deleted in new
chr3	15255649	15341368	chr3:15255649-15341368	3	-	15256085	15269736	0	9	654,261,220,43,131,165,197,63,146,	0,1203,3181,4111,6509,14063,48453,74854,85573,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	15257450	15258953	chr3:15257450-15258953	0	+	15257450	15257450	8553170	2	156,408,	0,1095,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	15257454	15259056	chr3:15257454-15259056	2	+	15257454	15257454	8553170	3	152,75,511,	0,654,1091,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	15258864	15276045	chr3:15258864-15276045	0	-	15258864	15269736	789624	5	186,43,131,165,378,	0,896,3294,10848,16803,
#Partially deleted in new
chr3	15262157	15332476	chr3:15262157-15332476	0	-	15304290	15332408	789624	5	132,165,197,63,206,	0,7555,41945,68346,70113,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	15262160	15275909	chr3:15262160-15275909	0	-	15262160	15269736	789624	4	129,165,290,242,	0,7552,10955,13507,
#Partially deleted in new
chr3	15269842	15341237	chr3:15269842-15341237	0	-	15269842	15269842	8553170	5	35,290,129,63,15,	0,3273,34260,60661,71380,
#Partially deleted in new
chr3	15304101	15332063	chr3:15304101-15332063	0	-	15304101	15304101	8553170	3	130,63,280,	0,26402,27682,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	15339748	15339855	chr3:15339748-15339855	3	+	15339748	15339748	8553170	1	107,	0,
#Deleted in new
chr3	15375372	15375645	chr3:15375372-15375645	7	-	15375372	15375372	16724991	1	273,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	15381274	15427518	chr3:15381274-15427518	3	-	15411255	15426511	789624	7	2913,193,142,171,135,349,117,	0,29970,32746,34497,43680,45012,46127,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	15383642	15399491	chr3:15383642-15399491	0	-	15383642	15383642	8553170	3	545,93,104,	0,838,15745,
#Partially deleted in new
chr3	15383901	15415907	chr3:15383901-15415907	0	-	15384149	15415907	789624	3	286,142,136,	0,30119,31870,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	15411016	15427518	chr3:15411016-15427518	1	-	15411255	15426511	789624	6	421,142,171,135,349,117,	0,3004,4755,13938,15270,16385,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	15411017	15427540	chr3:15411017-15427540	1	-	15411255	15426511	789624	5	420,142,171,349,139,	0,3003,4754,15269,16384,
#Partially deleted in new
chr3	15411329	15425065	chr3:15411329-15425065	0	-	15411329	15411329	8553170	5	108,142,86,171,111,	0,2691,4168,4442,13625,
#Partially deleted in new
chr3	15413668	15425035	chr3:15413668-15425035	0	-	15413806	15425035	789624	4	277,86,171,81,	0,1829,2103,11286,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	15414373	15427532	chr3:15414373-15427532	1	-	15414808	15426511	789624	6	541,86,171,135,349,131,	0,1124,1398,10581,11913,13028,
#Partially deleted in new
chr3	15415566	15440566	chr3:15415566-15440566	0	-	15415566	15426511	789624	5	17,171,349,211,132,	0,205,10720,23611,24868,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	15427354	15442613	chr3:15427354-15442613	3	+	15427779	15439155	789624	6	528,95,137,191,234,3505,	0,2558,4732,6993,8987,11754,
#Partially deleted in new
chr3	15427597	15439340	chr3:15427597-15439340	0	+	15427779	15434353	789624	5	285,95,191,234,232,	0,2315,6750,8744,11511,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	15433109	15433216	chr3:15433109-15433216	3	-	15433109	15433109	8553170	1	107,	0,
#Partially deleted in new
chr3	15436170	15440566	chr3:15436170-15440566	0	-	15436170	15436170	8553170	3	484,200,132,	0,3007,4264,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	15438645	15440594	chr3:15438645-15440594	1	-	15438645	15438645	8553170	2	732,160,	0,1789,
#Deleted in new
chr3	15439063	15440566	chr3:15439063-15440566	0	-	15439063	15439063	8553170	2	325,306,	0,1197,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	15439198	15443477	chr3:15439198-15443477	0	-	15439198	15439198	8553170	3	190,181,407,	0,2290,3872,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	15439198	15444069	chr3:15439198-15444069	0	-	15439198	15439198	8553170	3	190,181,36,	0,2290,4835,
#Deleted in new
chr3	15439198	15440560	chr3:15439198-15440560	0	-	15439198	15439198	8553170	2	179,771,	0,591,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	15439198	15449994	chr3:15439198-15449994	0	-	15439198	15439198	8553170	5	179,181,637,162,48,	0,2290,5044,8485,10748,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	15439198	15455940	chr3:15439198-15455940	0	-	15439198	15439198	8553170	6	190,88,117,269,103,42,	0,2290,8530,12246,14630,16700,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	15439254	15444875	chr3:15439254-15444875	0	-	15439254	15439254	8553170	3	123,175,633,	0,2234,4988,
#Partially deleted in new
chr3	15439889	15443456	chr3:15439889-15443456	1	-	15439889	15439889	8553170	2	301,471,	0,3096,
#Partially deleted in new
chr3	15440700	15450635	chr3:15440700-15450635	0	+	15440700	15440700	8553170	2	94,462,	0,9473,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	15441511	15443560	chr3:15441511-15443560	1	-	15441511	15441511	8553170	2	158,158,	0,1891,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	15444535	15451499	chr3:15444535-15451499	3	-	15444535	15444535	8553170	3	344,162,55,	0,3148,6909,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	15447473	15453957	chr3:15447473-15453957	1	-	15447473	15447473	8553170	3	372,269,129,	0,3971,6355,
#Partially deleted in new
chr3	15450132	15521751	chr3:15450132-15521751	3	-	15451643	15521625	0	17	1581,103,121,120,140,97,81,36,45,27,63,72,27,45,102,113,232,	0,3696,5766,6327,8053,16208,20403,23867,24095,24792,25292,26993,28844,29205,38073,39392,71387,
#Deleted in new
chr3	15450165	15450879	chr3:15450165-15450879	0	-	15450165	15450165	8553170	2	153,397,	0,317,
#Partially deleted in new
chr3	15450482	15498872	chr3:15450482-15498872	1	-	15451643	15498587	0	17	1231,103,121,120,140,97,81,36,45,27,63,72,27,45,102,113,361,	0,3346,5416,5977,7703,15858,20053,23517,23745,24442,24942,26643,28494,28855,37723,39042,48029,
#Partially deleted in new
chr3	15451472	15521751	chr3:15451472-15521751	1	-	15451643	15521625	789624	17	241,102,125,120,140,97,81,36,45,27,63,72,27,45,102,113,232,	0,2356,4422,4987,6713,14868,19063,22527,22755,23452,23952,25653,27504,27865,36733,38052,70047,
#Partially deleted in new
chr3	15451538	15521736	chr3:15451538-15521736	1	-	15451643	15521625	0	16	175,103,121,120,140,97,81,36,45,27,63,72,27,45,113,217,	0,2290,4360,4921,6647,14802,18997,22461,22689,23386,23886,25587,27438,27799,37986,69981,
#Partially deleted in new
chr3	15466401	15498548	chr3:15466401-15498548	0	-	15466401	15498548	789624	11	36,81,36,45,27,63,72,27,45,113,37,	0,4134,7598,7826,8523,9023,10724,12575,12936,23123,32110,
#Partially deleted in new
chr3	15475227	15477586	chr3:15475227-15477586	0	-	15475227	15475227	8553170	2	260,461,	0,1898,
#Deleted in new
chr3	15478589	15479374	chr3:15478589-15479374	0	-	15478589	15478589	8553170	3	200,46,37,	0,368,748,
#Deleted in new
chr3	15496238	15496308	chr3:15496238-15496308	3	-	15496238	15496238	5263520	1	70,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	15506622	15506905	chr3:15506622-15506905	3	-	15506622	15506622	8553170	1	283,	0,
#Partially deleted in new
chr3	15560703	15601831	chr3:15560703-15601831	1	-	15560864	15601463	789624	17	194,187,108,159,155,102,84,106,136,113,95,78,73,81,41,105,449,	0,2654,3847,7140,7728,10964,12455,14273,19206,22173,24544,25821,28836,30896,35680,40386,40679,
#Partially deleted in new
chr3	15560703	15601852	chr3:15560703-15601852	3	-	15586550	15601463	789624	16	194,187,108,159,155,102,84,106,136,113,95,78,81,41,105,470,	0,2654,3847,7140,7728,10964,12455,14273,19206,22173,24544,25821,30896,35680,40386,40679,
#Partially deleted in new
chr3	15560715	15601569	chr3:15560715-15601569	1	-	15560864	15601463	789624	9	182,187,108,159,155,102,84,105,187,	0,2642,3835,7128,7716,10952,12443,40374,40667,
#Partially deleted in new
chr3	15560745	15601557	chr3:15560745-15601557	0	-	15586550	15601463	789624	15	152,187,108,159,155,102,84,136,113,95,78,81,41,105,175,	0,2612,3805,7098,7686,10922,12413,19164,22131,24502,25779,30854,35638,40344,40637,
#Partially deleted in new
chr3	15560745	15601587	chr3:15560745-15601587	1	-	15560864	15601463	789624	14	152,187,108,159,155,102,84,106,136,113,81,41,105,205,	0,2612,3805,7098,7686,10922,12413,14231,19164,22131,30854,35638,40344,40637,
#Partially deleted in new
chr3	15560746	15601569	chr3:15560746-15601569	1	-	15560864	15601463	789624	16	151,187,108,159,155,102,84,106,136,113,95,78,73,41,105,187,	0,2611,3804,7097,7685,10921,12412,14230,19163,22130,24501,25778,28793,35637,40343,40636,
#Partially deleted in new
chr3	15560806	15601569	chr3:15560806-15601569	1	-	15560864	15601463	789624	15	91,187,108,159,155,84,106,136,113,95,73,81,41,105,187,	0,2551,3744,7037,7625,12352,14170,19103,22070,24441,28733,30793,35577,40283,40576,
#Partially deleted in new
chr3	15563357	15601569	chr3:15563357-15601569	0	-	15582956	15601463	789624	14	187,108,159,155,102,84,106,136,113,73,81,41,105,187,	0,1193,4486,5074,8310,9801,11619,16552,19519,26182,28242,33026,37732,38025,
#Partially deleted in new
chr3	15579899	15601592	chr3:15579899-15601592	0	-	15579899	15601463	789624	8	146,113,95,78,73,41,105,210,	0,2977,5348,6625,9640,16484,21190,21483,
#Partially deleted in new
chr3	15582877	15601561	chr3:15582877-15601561	0	-	15582877	15601463	789624	5	112,95,78,105,179,	0,2370,3647,18212,18505,
#Partially deleted in new
chr3	15595914	15601185	chr3:15595914-15601185	0	-	15595914	15595914	8553170	2	510,96,	0,5175,
#Partially deleted in new
chr3	15596151	15601569	chr3:15596151-15601569	0	-	15596151	15596151	8553170	3	273,105,187,	0,4938,5231,
#Deleted in new
chr3	15600800	15601546	chr3:15600800-15601546	0	-	15600800	15600800	8553170	2	394,164,	0,582,
#Partially deleted in new
chr3	15601340	15645822	chr3:15601340-15645822	1	+	15635439	15645488	789624	4	307,265,150,1507,	0,34083,40567,42975,
#Partially deleted in new
chr3	15601369	15645582	chr3:15601369-15645582	1	+	15601720	15645488	789624	4	401,265,150,1267,	0,34054,40538,42946,
#Partially deleted in new
chr3	15601386	15647640	chr3:15601386-15647640	3	+	15601850	15645488	789624	4	508,265,150,3325,	0,34037,40521,42929,
#Partially deleted in new
chr3	15601735	15645729	chr3:15601735-15645729	1	+	15635439	15645488	789624	5	159,276,265,150,1414,	0,30855,33688,40172,42580,
#Partially deleted in new
chr3	15601744	15642252	chr3:15601744-15642252	1	+	15601850	15642138	789624	3	150,265,345,	0,33679,40163,
#Partially deleted in new
chr3	15601747	15606752	chr3:15601747-15606752	0	+	15601747	15601747	8553170	2	147,312,	0,4693,
#Partially deleted in new
chr3	15601751	15645797	chr3:15601751-15645797	1	+	15635439	15645488	789624	5	19,276,265,150,1482,	0,30839,33672,40156,42564,
#Partially deleted in new
chr3	15601763	15642215	chr3:15601763-15642215	0	+	15601763	15601763	8553170	4	547,276,265,308,	0,30827,33660,40144,
#Partially deleted in new
chr3	15601770	15635429	chr3:15601770-15635429	0	+	15601770	15601770	8553170	4	124,174,276,6,	0,366,30820,33653,
#Partially deleted in new
chr3	15601800	15645715	chr3:15601800-15645715	1	+	15631445	15645488	789624	6	94,119,69,265,150,1400,	0,28201,29626,33623,40107,42515,
#Partially deleted in new
chr3	15601968	15645819	chr3:15601968-15645819	1	+	15635439	15645488	789624	4	342,265,150,1504,	0,33455,39939,42347,
#Partially deleted in new
chr3	15601968	15644670	chr3:15601968-15644670	0	+	15635439	15644670	789624	4	342,265,150,355,	0,33455,39939,42347,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	15602137	15606911	chr3:15602137-15606911	0	+	15602137	15602137	8553170	2	173,471,	0,4303,
#Partially deleted in new
chr3	15630001	15642240	chr3:15630001-15642240	1	+	15635439	15642138	789624	3	119,265,333,	0,5422,11906,
#Partially deleted in new
chr3	15667235	15859771	chr3:15667235-15859771	3	-	15670269	15859403	789624	28	3321,92,83,83,146,84,88,220,118,88,202,75,27,112,141,69,64,83,115,79,213,143,88,201,71,79,84,395,	0,8662,9738,10244,10973,12065,12240,17990,18766,18986,22783,27503,27952,28898,40688,42432,43975,44904,46291,47342,53679,57146,68174,69797,84514,98998,127987,192141,
#Partially deleted in new
chr3	15667235	15798184	chr3:15667235-15798184	1	-	15670269	15735497	789624	28	3321,92,83,83,146,84,88,220,118,88,202,75,27,112,141,69,64,83,115,79,213,143,88,201,71,79,84,214,	0,8662,9738,10244,10973,12065,12240,17990,18766,18986,22783,27503,27952,28898,40688,42432,43975,44904,46291,47342,53679,57146,68174,69797,84514,98998,127987,130735,
#Partially deleted in new
chr3	15667238	15859422	chr3:15667238-15859422	0	-	15670269	15859403	789624	29	1067,447,92,83,83,146,84,88,220,118,88,202,75,27,112,141,69,64,83,115,79,213,143,88,201,71,79,84,46,	0,2871,8659,9735,10241,10970,12062,12237,17987,18763,18983,22780,27500,27949,28895,40685,42429,43972,44901,46288,47339,53676,57143,68171,69794,84511,98995,127984,192138,
#Partially deleted in new
chr3	15669791	15676223	chr3:15669791-15676223	0	-	15669791	15669791	8553170	2	765,326,	0,6106,
#Partially deleted in new
chr3	15670109	15798184	chr3:15670109-15798184	0	-	15670109	15670109	8553170	28	447,92,83,83,146,84,88,220,118,88,202,75,27,112,141,69,64,83,115,79,213,143,88,201,71,79,84,214,	0,5788,6864,7370,8099,9191,9366,15116,15892,16112,19909,24629,25078,26024,37814,39558,41101,42030,43417,44468,50805,54272,65300,66923,81640,96124,125113,127861,
#Partially deleted in new
chr3	15676595	15677606	chr3:15676595-15677606	0	-	15676595	15676595	8553170	2	461,127,	0,884,
#Partially deleted in new
chr3	15677535	15796506	chr3:15677535-15796506	0	-	15678316	15795236	789624	22	27,146,220,118,88,202,75,27,112,141,69,64,83,115,79,213,143,88,201,79,84,111,	0,673,7690,8466,8686,12483,17203,17652,18598,30388,32132,33675,34604,35991,37042,43379,46846,57874,59497,88698,117687,118860,
#Partially deleted in new
chr3	15679300	15686453	chr3:15679300-15686453	0	-	15679300	15679300	8553170	5	84,88,220,118,232,	0,175,5925,6701,6921,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr3	15683741	15796826	chr3:15683741-15796826	0	-	15683741	15683741	8553170	20	1704,308,202,75,27,112,141,69,64,83,115,79,213,143,88,201,71,79,84,431,	0,2260,6277,10997,11446,12392,24182,25926,27469,28398,29785,30836,37173,40640,51668,53291,68008,82492,111481,112654,
#Partially deleted in new
chr3	15689839	15696231	chr3:15689839-15696231	0	-	15689839	15689839	8553170	4	381,75,27,98,	0,4899,5348,6294,
#Deleted in new
chr3	15697297	15697371	chr3:15697297-15697371	3	-	15697297	15697297	5263520	1	74,	0,
#Partially deleted in new
chr3	15709667	15721122	chr3:15709667-15721122	0	-	15709667	15709667	8553170	5	69,64,83,115,208,	0,1543,2472,3859,11247,
#Partially deleted in new
chr3	15721100	15756547	chr3:15721100-15756547	0	-	15721100	15721100	8553170	6	27,143,88,201,71,64,	0,3281,14309,15932,30649,35383,
#Partially deleted in new
chr3	15724396	15756548	chr3:15724396-15756548	0	-	15724396	15724396	8553170	5	128,88,201,71,69,	0,11013,12636,27353,32083,
#Partially deleted in new
chr3	15731876	15732536	chr3:15731876-15732536	3	+	15731876	15731876	8553170	1	660,	0,
#Partially deleted in new
chr3	15732251	15733404	chr3:15732251-15733404	7	+	15732251	15732251	16724991	2	628,202,	0,951,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	15732826	15733470	chr3:15732826-15733470	5	+	15732826	15732826	16724991	1	644,	0,
#Partially deleted in new
chr3	15737038	15859469	chr3:15737038-15859469	0	-	15814291	15859403	789624	6	195,71,79,84,70,93,	0,14711,29195,58184,77201,122338,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	15738514	15738809	chr3:15738514-15738809	3	+	15738514	15738514	8553170	1	295,	0,
#Partially deleted in new
chr3	15781436	15797979	chr3:15781436-15797979	0	-	15781436	15781436	8553170	3	219,84,1575,	0,13786,14968,
#Deleted in new
chr3	15873770	15873849	chr3:15873770-15873849	3	+	15873770	15873770	5263520	1	79,	0,
#Deleted in new
chr3	15878046	15879571	chr3:15878046-15879571	7	+	15878046	15878046	16724991	1	1525,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	16174648	16229746	chr3:16174648-16229746	3	+	16175151	16227500	789624	10	1042,167,205,168,118,195,132,105,144,2393,	0,21111,25970,33854,36475,37920,44754,45261,47966,52705,
#Partially deleted in new
chr3	16174708	16231992	chr3:16174708-16231992	1	+	16175151	16231873	789624	10	982,167,205,168,118,195,132,105,144,200,	0,21051,25910,33794,36415,37860,44694,45201,47906,57084,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	16175416	16183253	chr3:16175416-16183253	0	+	16175416	16175416	8553170	2	274,541,	0,7296,
#Partially deleted in new
chr3	16175664	16208645	chr3:16175664-16208645	0	+	16175664	16200820	789624	4	26,198,205,143,	0,20095,24954,32838,
#Partially deleted in new
chr3	16212697	16220249	chr3:16212697-16220249	0	+	16212697	16212697	8553170	3	66,132,340,	0,6705,7212,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	16219399	16229745	chr3:16219399-16229745	1	+	16219420	16227582	789624	5	135,105,144,90,2301,	0,510,3215,7954,8045,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	16222668	16226762	chr3:16222668-16226762	0	+	16222668	16226589	8553170	2	90,334,	0,3760,
#Deleted in new
chr3	16252122	16253130	chr3:16252122-16253130	3	-	16252122	16252122	8553170	2	380,342,	0,666,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	16257977	16264972	chr3:16257977-16264972	3	-	16260763	16264876	0	3	2852,75,204,	0,6177,6791,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	16257978	16264969	chr3:16257978-16264969	1	-	16260763	16264876	0	2	2851,201,	0,6790,
#Partially deleted in new
chr3	16259909	16264777	chr3:16259909-16264777	0	-	16259909	16259909	8553170	3	920,75,183,	0,4245,4685,
#Partially deleted in new
chr3	16260423	16264587	chr3:16260423-16264587	0	-	16260423	16260423	8553170	3	406,75,257,	0,3731,3907,
#Partially deleted in new
chr3	16265159	16306086	chr3:16265159-16306086	1	+	16269245	16303562	789624	9	346,150,143,64,107,142,243,109,2679,	0,3966,5769,6499,21182,29696,36466,37480,38248,
#Partially deleted in new
chr3	16265198	16306087	chr3:16265198-16306087	1	+	16270952	16303562	789624	9	307,150,127,64,107,142,243,109,2680,	0,3927,5746,6460,21143,29657,36427,37441,38209,
#Partially deleted in new
chr3	16265201	16337361	chr3:16265201-16337361	3	+	16270952	16303562	789624	10	304,150,127,64,107,142,243,109,185,250,	0,3924,5743,6457,21140,29654,36424,37438,38206,71910,
#Partially deleted in new
chr3	16265206	16303983	chr3:16265206-16303983	0	+	16270952	16272177	789624	10	299,150,127,64,177,107,142,243,109,576,	0,3919,5738,6452,6938,21135,29649,36419,37433,38201,
#Partially deleted in new
chr3	16265209	16337315	chr3:16265209-16337315	1	+	16269245	16303562	789624	10	296,150,143,64,107,142,243,109,185,204,	0,3916,5719,6449,21132,29646,36416,37430,38198,71902,
#Partially deleted in new
chr3	16265231	16271195	chr3:16265231-16271195	0	+	16265231	16265231	8553170	3	274,150,251,	0,3894,5713,
#Partially deleted in new
chr3	16265232	16301786	chr3:16265232-16301786	0	+	16270952	16286393	789624	6	273,150,127,107,142,161,	0,3893,5712,21109,29623,36393,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	16265465	16350299	chr3:16265465-16350299	1	+	16270952	16303562	789624	10	40,150,127,64,107,142,243,109,182,1124,	0,3660,5479,6193,20876,29390,36160,37174,37945,83710,
#Partially deleted in new
chr3	16275059	16276632	chr3:16275059-16276632	7	-	16275059	16275059	16724991	3	226,406,460,	0,540,1113,
#Partially deleted in new
chr3	16313573	16326867	chr3:16313573-16326867	0	-	16315854	16326867	789624	5	119,262,58,82,95,	0,2051,3601,9802,13199,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	16314438	16314987	chr3:16314438-16314987	3	+	16314438	16314438	8553170	1	549,	0,
#Partially deleted in new
chr3	16315844	16482865	chr3:16315844-16482865	1	-	16316827	16482782	789624	9	1388,82,104,116,204,385,109,187,120,	0,7531,10928,42087,54231,61873,93530,118006,166901,
#Partially deleted in new
chr3	16315855	16513706	chr3:16315855-16513706	3	-	16316827	16493869	789624	10	1377,82,104,116,204,385,109,187,153,265,	0,7520,10917,42076,54220,61862,93519,117995,177869,197586,
#Partially deleted in new
chr3	16316529	16370966	chr3:16316529-16370966	0	-	16316529	16316529	8553170	6	703,82,104,116,204,105,	0,6846,10243,41402,53546,54332,
#Deleted in new
chr3	16339307	16339871	chr3:16339307-16339871	3	+	16339307	16339307	8553170	1	564,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	16347596	16349263	chr3:16347596-16349263	0	+	16347596	16347596	8553170	2	436,88,	0,1579,
#Partially deleted in new
chr3	16377718	16513374	chr3:16377718-16513374	0	-	16377718	16493869	789624	5	384,109,187,153,304,	0,31656,56132,116006,135352,
#Partially deleted in new
chr3	16377892	16434770	chr3:16377892-16434770	0	-	16377892	16377892	8553170	4	210,109,187,63,	0,31482,55958,56815,
#Partially deleted in new
chr3	16378052	16484835	chr3:16378052-16484835	0	-	16378052	16378052	8553170	4	50,109,187,167,	0,31322,55798,106616,
#Partially deleted in new
chr3	16378071	16472599	chr3:16378071-16472599	0	-	16378071	16378071	8553170	5	31,109,187,158,81,	0,31303,55779,93889,94447,
#Partially deleted in new
chr3	16378094	16512922	chr3:16378094-16512922	0	-	16378094	16493869	789624	5	8,109,187,156,139,	0,31280,55756,115630,134689,
#Partially deleted in new
chr3	16378094	16512904	chr3:16378094-16512904	0	-	16378094	16493869	789624	5	8,109,187,153,121,	0,31280,55756,115630,134689,
#Partially deleted in new
chr3	16409427	16513522	chr3:16409427-16513522	0	-	16416189	16493869	789624	5	56,100,187,153,81,	0,6684,24423,84297,104014,
#Partially deleted in new
chr3	16409472	16514026	chr3:16409472-16514026	0	-	16409472	16493869	789624	4	11,187,153,204,	0,24378,84252,104350,
#Deleted in new
chr3	16530770	16531802	chr3:16530770-16531802	3	+	16530770	16530770	8553170	2	129,316,	0,716,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	16536319	16541373	chr3:16536319-16541373	3	+	16536319	16536319	789624	3	175,151,1039,	0,3056,4015,
#Partially deleted in new
chr3	16586791	16604790	chr3:16586791-16604790	1	-	16588659	16604502	789624	11	1922,99,114,51,72,140,64,52,92,147,351,	0,5258,6863,7741,8522,9958,10196,10698,11295,11660,17648,
#Partially deleted in new
chr3	16586791	16605499	chr3:16586791-16605499	1	-	16588659	16605205	789624	11	1922,99,114,51,72,140,64,52,92,147,297,	0,5258,6863,7741,8522,9958,10196,10698,11295,11660,18411,
#Partially deleted in new
chr3	16596749	16670306	chr3:16596749-16670306	2	-	16596749	16638001	789624	7	140,64,52,92,147,201,29,	0,238,740,1337,1702,41135,73528,
#Partially deleted in new
chr3	16687985	16697479	chr3:16687985-16697479	3	-	16687985	16687985	8553170	3	226,84,101,	0,4303,9393,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	16692744	16694202	chr3:16692744-16694202	7	-	16692744	16692744	16724991	1	1458,	0,
#Partially deleted in new
chr3	16802650	17011084	chr3:16802650-17011084	0	+	16802650	16802650	8553170	3	438,413,180,	0,207023,208254,
#Partially deleted in new
chr3	16884958	17090594	chr3:16884958-17090594	1	+	16885039	17089912	789624	6	408,2487,204,76,110,862,	0,124715,129749,157915,182997,204774,
#Partially deleted in new
chr3	16933089	17090593	chr3:16933089-17090593	3	+	17009724	17089912	789624	6	202,2487,204,76,110,861,	0,76584,81618,109784,134866,156643,
#Partially deleted in new
chr3	16933195	16933260	chr3:16933195-16933260	3	+	16933195	16933195	5263520	1	65,	0,
#Partially deleted in new
chr3	17010493	17081546	chr3:17010493-17081546	0	+	17010493	17081244	789624	5	1667,204,76,110,359,	0,4214,32380,57462,70694,
#Partially deleted in new
chr3	17042741	17044192	chr3:17042741-17044192	3	-	17042741	17042741	8553170	2	172,139,	0,1312,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	17141014	17205165	chr3:17141014-17205165	3	+	17141014	17141014	8553170	5	77,448,173,78,584,	0,10433,14305,62708,63567,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr3	17157161	17740907	chr3:17157161-17740907	3	-	17160962	17508570	0	22	4095,162,80,100,164,257,86,107,143,173,70,51,89,103,68,75,90,109,70,132,65,1565,	0,9605,10587,27947,57045,81001,101344,134733,150830,214913,217309,217467,219363,226751,246019,247532,247710,249256,271288,351312,466687,582181,
#Partially deleted in new
chr3	17160371	18444817	chr3:17160371-18444817	0	-	17160371	17160371	8553170	9	885,162,80,100,164,257,86,143,211,	0,6395,7377,24737,53835,77791,98134,147620,1284235,
#Partially deleted in new
chr3	17160556	17700020	chr3:17160556-17700020	1	-	17160962	17508570	0	24	700,162,80,100,164,66,257,86,107,143,173,70,51,89,103,68,75,90,109,70,132,65,121,43,	0,6210,7192,24552,53650,73128,77606,97949,131338,147435,211518,213914,214072,215968,223356,242624,244137,244315,245861,267893,347917,463292,502433,539421,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	17184576	17406720	chr3:17184576-17406720	1	-	17185100	17406549	789624	16	632,164,66,257,86,107,143,173,70,51,89,103,68,75,90,303,	0,29630,49108,53586,73929,107318,123415,187498,189894,190052,191948,199336,218604,220117,220295,221841,
#Partially deleted in new
chr3	17333125	17333431	chr3:17333125-17333431	7	+	17333125	17333125	16724991	1	306,	0,
#Partially deleted in new
chr3	17337388	17372134	chr3:17337388-17372134	0	-	17337388	17337388	8553170	4	248,127,41,60,	0,1060,3266,34686,
#Partially deleted in new
chr3	17403200	17742607	chr3:17403200-17742607	0	-	17406500	17508570	789624	6	48,75,90,109,132,127,	0,1493,1671,3217,105273,339280,
#Partially deleted in new
chr3	17404693	17742601	chr3:17404693-17742601	0	-	17406500	17508570	789624	6	75,90,109,132,65,121,	0,178,1724,103780,219155,337787,
#Partially deleted in new
chr3	17404713	17742615	chr3:17404713-17742615	0	-	17404713	17508570	789624	6	55,90,109,70,132,135,	0,158,1704,23736,103760,337767,
#Partially deleted in new
chr3	17404731	17742604	chr3:17404731-17742604	0	-	17406500	17508570	789624	5	37,90,109,132,124,	0,140,1686,103742,337749,
#Partially deleted in new
chr3	17404746	17742615	chr3:17404746-17742615	0	-	17404746	17508570	789624	7	22,90,109,70,132,65,135,	0,125,1671,23703,103727,219102,337734,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	17404905	17742594	chr3:17404905-17742594	0	-	17404905	17508570	789624	7	56,109,70,132,110,96,114,	0,1512,23544,103568,119679,242055,337575,
#Partially deleted in new
chr3	17404909	17742615	chr3:17404909-17742615	0	-	17404909	17404909	8553170	7	52,109,70,132,118,65,135,	0,1508,23540,103564,217738,218939,337571,
#Partially deleted in new
chr3	17406417	17739479	chr3:17406417-17739479	0	-	17406417	17406417	8553170	5	109,132,118,65,137,	0,102056,216230,217431,332925,
#Partially deleted in new
chr3	17406417	17742601	chr3:17406417-17742601	0	-	17406417	17406417	8553170	5	109,132,118,65,121,	0,102056,216230,217431,336063,
#Partially deleted in new
chr3	17406429	17700006	chr3:17406429-17700006	0	-	17406429	17508570	789624	6	97,70,132,136,114,29,	0,22020,102044,169984,179923,293548,
#Partially deleted in new
chr3	17406471	17623916	chr3:17406471-17623916	0	-	17406471	17508570	789624	5	55,70,132,61,68,	0,21978,102002,140544,217377,
#Partially deleted in new
chr3	17465149	17465510	chr3:17465149-17465510	7	+	17465149	17465149	16724991	1	361,	0,
#Partially deleted in new
chr3	17508480	17702354	chr3:17508480-17702354	0	-	17508480	17508570	789624	4	125,118,65,163,	0,114167,115368,193711,
#Partially deleted in new
chr3	17508548	17742644	chr3:17508548-17742644	0	-	17508548	17508548	8553170	5	57,205,118,65,164,	0,77804,114099,115300,233932,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	17575202	17700014	chr3:17575202-17700014	0	-	17575202	17575202	8553170	6	108,136,118,65,96,37,	0,1211,47445,48646,71758,124775,
#Partially deleted in new
chr3	17576481	17742612	chr3:17576481-17742612	0	-	17576481	17576481	8553170	5	68,205,118,65,132,	0,9871,46166,47367,165999,
#Partially deleted in new
chr3	17586351	17742748	chr3:17586351-17742748	0	-	17586351	17586351	8553170	4	115,118,65,268,	0,36296,37497,156129,
#Partially deleted in new
chr3	17623714	17672675	chr3:17623714-17672675	0	-	17623714	17623714	8553170	2	199,131,	0,48830,
#Partially deleted in new
chr3	17644040	17742739	chr3:17644040-17742739	0	-	17644040	17644040	8553170	3	80,96,259,	0,2920,98440,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	17664962	17665025	chr3:17664962-17665025	3	+	17664962	17664962	8553170	1	63,	0,
#Deleted in new
chr3	17706057	17706233	chr3:17706057-17706233	7	-	17706057	17706057	16724991	1	176,	0,
#Deleted in new
chr3	17871728	17872598	chr3:17871728-17872598	7	-	17871728	17871728	16724991	1	870,	0,
#Partially deleted in new
chr3	17877454	17878169	chr3:17877454-17878169	7	-	17877454	17877454	16724991	1	715,	0,
#Partially deleted in new
chr3	17990022	17995544	chr3:17990022-17995544	3	+	17990022	17990022	8553170	2	155,303,	0,5219,
#Partially deleted in new
chr3	18345386	18425337	chr3:18345386-18425337	1	-	18349169	18420967	0	11	4296,204,156,213,455,112,124,127,177,235,1711,	0,6605,32783,41012,49075,51792,69724,70620,71515,75370,78240,
#Partially deleted in new
chr3	18347939	18424573	chr3:18347939-18424573	1	-	18349169	18420967	0	12	1743,96,204,156,213,455,112,124,127,177,235,947,	0,3373,4052,30230,38459,46522,49239,67171,68067,68962,72817,75687,
#Partially deleted in new
chr3	18347939	18438773	chr3:18347939-18438773	3	-	18349169	18420967	0	11	1743,204,156,213,455,112,124,127,177,235,209,	0,4052,30230,38459,46522,49239,67171,68067,68962,72817,90625,
#Deleted in new
chr3	18348884	18353084	chr3:18348884-18353084	0	-	18348884	18348884	8553170	1	4200,	0,
#Deleted in new
chr3	18349540	18351531	chr3:18349540-18351531	0	-	18349540	18349540	8553170	2	142,219,	0,1772,
#Partially deleted in new
chr3	18351802	18378327	chr3:18351802-18378327	0	-	18351802	18351802	8553170	2	393,158,	0,26367,
#Partially deleted in new
chr3	18397213	18417510	chr3:18397213-18417510	0	-	18397213	18417073	789624	5	77,124,127,177,53,	0,17897,18793,19688,20244,
#Partially deleted in new
chr3	18397255	18444883	chr3:18397255-18444883	0	-	18397255	18420967	789624	6	35,124,127,177,235,277,	0,17855,18751,19646,23501,47351,
#Deleted in new
chr3	18408679	18409635	chr3:18408679-18409635	3	-	18408679	18408679	8553170	1	956,	0,
#Partially deleted in new
chr3	18410797	18417393	chr3:18410797-18417393	1	-	18410964	18416977	789624	4	257,124,127,492,	0,4313,5209,6104,
#Deleted in new
chr3	18414948	18416126	chr3:18414948-18416126	0	-	18414948	18414948	8553170	2	286,120,	0,1058,
#Deleted in new
chr3	18416003	18421388	chr3:18416003-18421388	0	-	18416003	18420967	789624	3	130,177,632,	0,898,4753,
#Partially deleted in new
chr3	18416022	18445588	chr3:18416022-18445588	0	-	18416022	18420967	789624	4	111,177,235,71,	0,879,4734,29495,
#Deleted in new
chr3	18416900	18424740	chr3:18416900-18424740	0	-	18416900	18420967	789624	4	178,235,100,51,	0,3856,6726,7789,
#Partially deleted in new
chr3	18416941	18438692	chr3:18416941-18438692	0	-	18416941	18420967	789624	4	137,235,83,128,	0,3815,19847,21623,
#Partially deleted in new
chr3	18417575	18444873	chr3:18417575-18444873	1	-	18417661	18420967	789624	3	124,235,267,	0,3181,27031,
#Partially deleted in new
chr3	18420684	18438734	chr3:18420684-18438734	0	-	18420684	18420684	8553170	2	307,170,	0,17880,
#Partially deleted in new
chr3	18420755	18435253	chr3:18420755-18435253	0	-	18420755	18420967	789624	2	236,343,	0,14155,
#Deleted in new
chr3	18420943	18425369	chr3:18420943-18425369	0	-	18420943	18420967	789624	3	48,100,316,	0,2683,4110,
#Partially deleted in new
chr3	18445023	18526508	chr3:18445023-18526508	1	+	18445023	18445023	8553170	5	419,66,53,77,122,	0,18456,19263,20939,81363,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	18445236	18469702	chr3:18445236-18469702	1	+	18445236	18445236	8553170	5	206,66,53,77,717,	0,18243,19050,20726,23749,
#Partially deleted in new
chr3	18462810	18528032	chr3:18462810-18528032	0	+	18462810	18462810	8553170	6	735,53,77,154,153,82,	0,1476,3152,63576,64363,65140,
#Partially deleted in new
chr3	18462810	18466004	chr3:18462810-18466004	0	+	18462810	18462810	8553170	4	735,53,65,42,	0,1476,2483,3152,
#Partially deleted in new
chr3	18463645	18466250	chr3:18463645-18466250	0	+	18463645	18463645	8553170	2	694,288,	0,2317,
#Partially deleted in new
chr3	18464329	18530394	chr3:18464329-18530394	1	+	18464329	18464329	8553170	6	10,77,147,154,153,414,	0,1633,9382,62057,62844,65651,
#Partially deleted in new
chr3	18465982	18585762	chr3:18465982-18585762	0	+	18465982	18465982	8553170	7	57,98,147,154,153,56,143,	0,6379,7729,60404,61191,119404,119637,
#Partially deleted in new
chr3	18465982	18585762	chr3:18465982-18585762	0	+	18465982	18465982	8553170	5	57,97,154,153,143,	0,45549,60404,61191,119637,
#Partially deleted in new
chr3	18465982	18764059	chr3:18465982-18764059	2	+	18465982	18465982	8553170	5	57,154,153,117,307,	0,60404,61191,279971,297770,
#Partially deleted in new
chr3	18465982	18591770	chr3:18465982-18591770	0	+	18465982	18465982	8553170	8	57,154,153,130,56,143,39,136,	0,60404,61191,82081,119404,119637,120887,125652,
#Partially deleted in new
chr3	18465982	18534762	chr3:18465982-18534762	0	+	18465982	18465982	8553170	5	57,98,154,153,76,	0,6379,60404,61191,68704,
#Partially deleted in new
chr3	18465982	18591966	chr3:18465982-18591966	0	+	18465982	18465982	8553170	6	57,154,153,143,39,332,	0,60404,61191,119637,120887,125652,
#Partially deleted in new
chr3	18465982	18530049	chr3:18465982-18530049	0	+	18465982	18465982	8553170	5	57,115,153,189,69,	0,60443,61191,61968,63998,
#Partially deleted in new
chr3	18465982	18591984	chr3:18465982-18591984	0	+	18465982	18465982	8553170	4	57,154,153,350,	0,60404,61191,125652,
#Partially deleted in new
chr3	18465982	18534897	chr3:18465982-18534897	0	+	18465982	18465982	8553170	5	57,115,153,205,211,	0,60443,61191,63998,68704,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	18465982	18535024	chr3:18465982-18535024	0	+	18465982	18465982	8553170	4	57,154,153,338,	0,60404,61191,68704,
#Partially deleted in new
chr3	18465982	18527638	chr3:18465982-18527638	0	+	18465982	18465982	8553170	3	57,154,465,	0,60404,61191,
#Partially deleted in new
chr3	18465982	18604241	chr3:18465982-18604241	0	+	18465982	18465982	8553170	7	57,154,153,56,143,39,53,	0,60404,61191,119404,119637,120887,138206,
#Partially deleted in new
chr3	18465982	18607176	chr3:18465982-18607176	0	+	18465982	18465982	8553170	9	57,98,154,153,130,56,143,39,178,	0,6379,60404,61191,82081,119404,119637,120887,141016,
#Partially deleted in new
chr3	18465982	18591775	chr3:18465982-18591775	0	+	18465982	18465982	8553170	8	57,154,153,189,56,143,39,141,	0,60404,61191,61968,119404,119637,120887,125652,
#Partially deleted in new
chr3	18465982	18607137	chr3:18465982-18607137	0	+	18465982	18465982	8553170	6	57,154,153,143,39,139,	0,60404,61191,119637,120887,141016,
#Partially deleted in new
chr3	18465982	18607186	chr3:18465982-18607186	0	+	18465982	18465982	8553170	5	57,154,153,346,188,	0,60404,61191,63998,141016,
#Partially deleted in new
chr3	18465982	18506690	chr3:18465982-18506690	0	+	18465982	18465982	8553170	2	57,757,	0,39951,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	18465982	18500730	chr3:18465982-18500730	0	+	18465982	18465982	8553170	4	57,98,147,363,	0,6379,7729,34385,
#Partially deleted in new
chr3	18465982	18530234	chr3:18465982-18530234	0	+	18465982	18465982	8553170	6	57,98,147,154,153,254,	0,6379,7729,60404,61191,63998,
#Partially deleted in new
chr3	18465982	18530172	chr3:18465982-18530172	0	+	18465982	18465982	8553170	5	57,154,153,64,192,	0,60404,61191,62093,63998,
#Partially deleted in new
chr3	18465982	18764923	chr3:18465982-18764923	0	+	18465982	18465982	8553170	6	57,154,153,117,39,194,	0,60404,61191,279971,297770,298747,
#Partially deleted in new
chr3	18465982	18528031	chr3:18465982-18528031	0	+	18465982	18465982	8553170	6	57,98,147,154,153,81,	0,6379,7729,60404,61191,61968,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	18465982	18483733	chr3:18465982-18483733	1	+	18465982	18465982	8553170	3	57,147,385,	0,7729,17366,
#Partially deleted in new
chr3	18465982	18506134	chr3:18465982-18506134	0	+	18465982	18465982	8553170	4	57,98,147,201,	0,6379,7729,39951,
#Partially deleted in new
chr3	18465982	18534986	chr3:18465982-18534986	0	+	18465982	18465982	8553170	4	57,115,153,300,	0,60443,61191,68704,
#Partially deleted in new
chr3	18465982	18764914	chr3:18465982-18764914	0	+	18465982	18465982	8553170	7	57,154,153,56,117,39,185,	0,60404,61191,199857,279971,297770,298747,
#Partially deleted in new
chr3	18465982	18607179	chr3:18465982-18607179	0	+	18465982	18465982	8553170	6	57,115,153,162,130,181,	0,60443,61191,80808,82081,141016,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	18465982	18530370	chr3:18465982-18530370	0	+	18465982	18465982	8553170	5	57,134,154,153,390,	0,50062,60404,61191,63998,
#Partially deleted in new
chr3	18465982	18534911	chr3:18465982-18534911	0	+	18465982	18465982	8553170	6	57,154,153,189,205,225,	0,60404,61191,61968,63998,68704,
#Partially deleted in new
chr3	18465982	18512210	chr3:18465982-18512210	0	+	18465982	18465982	8553170	2	57,679,	0,45549,
#Partially deleted in new
chr3	18465982	18585631	chr3:18465982-18585631	0	+	18465982	18465982	8553170	8	57,98,147,154,153,205,56,12,	0,6379,7729,60404,61191,63998,119404,119637,
#Partially deleted in new
chr3	18465982	18506536	chr3:18465982-18506536	0	+	18465982	18465982	8553170	3	57,147,603,	0,7729,39951,
#Partially deleted in new
chr3	18465982	18530447	chr3:18465982-18530447	0	+	18465982	18465982	8553170	4	57,154,153,467,	0,60404,61191,63998,
#Partially deleted in new
chr3	18465982	18530727	chr3:18465982-18530727	0	+	18465982	18465982	8553170	4	57,115,73,747,	0,60443,61191,63998,
#Partially deleted in new
chr3	18465985	18534863	chr3:18465985-18534863	0	+	18465985	18465985	8553170	5	54,154,153,205,177,	0,60401,61188,63995,68701,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	18465986	18484088	chr3:18465986-18484088	0	+	18465986	18465986	8553170	2	53,740,	0,17362,
#Partially deleted in new
chr3	18465991	18530317	chr3:18465991-18530317	0	+	18465991	18465991	8553170	5	48,154,153,189,337,	0,60395,61182,61959,63989,
#Partially deleted in new
chr3	18465993	18534763	chr3:18465993-18534763	0	+	18465993	18465993	8553170	6	46,147,154,153,205,77,	0,7718,60393,61180,63987,68693,
#Partially deleted in new
chr3	18466000	18585677	chr3:18466000-18585677	0	+	18466000	18466000	8553170	7	39,154,153,189,205,56,58,	0,60386,61173,61950,63980,119386,119619,
#Partially deleted in new
chr3	18466012	18591826	chr3:18466012-18591826	0	+	18466012	18466012	8553170	8	27,154,153,48,56,143,39,192,	0,60374,61161,102094,119374,119607,120857,125622,
#Partially deleted in new
chr3	18466022	18607186	chr3:18466022-18607186	0	+	18466022	18466022	8553170	8	17,97,154,153,56,143,39,188,	0,45509,60364,61151,119364,119597,120847,140976,
#Partially deleted in new
chr3	18472361	18530351	chr3:18472361-18530351	1	+	18472361	18472361	8553170	4	98,154,153,371,	0,54025,54812,57619,
#Partially deleted in new
chr3	18472362	18476785	chr3:18472362-18476785	1	+	18472362	18472362	8553170	3	97,147,347,	0,1349,4076,
#Deleted in new
chr3	18525790	18527231	chr3:18525790-18527231	0	+	18525790	18525790	8553170	2	750,58,	0,1383,
#Partially deleted in new
chr3	18526386	18591793	chr3:18526386-18591793	1	+	18526386	18526386	8553170	6	154,153,205,143,39,159,	0,787,3594,59233,60483,65248,
#Deleted in new
chr3	18526393	18530132	chr3:18526393-18530132	1	+	18526393	18526393	8553170	4	147,153,355,152,	0,780,1391,3587,
#Partially deleted in new
chr3	18526395	18625427	chr3:18526395-18625427	1	+	18526395	18526395	8553170	3	145,153,312,	0,778,98720,
#Partially deleted in new
chr3	18526440	18607184	chr3:18526440-18607184	1	+	18526440	18526440	8553170	6	100,153,130,143,39,186,	0,733,21623,59179,60429,80558,
#Partially deleted in new
chr3	18526498	18902887	chr3:18526498-18902887	1	+	18526498	18526498	8553170	5	42,153,117,39,384,	0,675,219455,237254,376005,
#Partially deleted in new
chr3	18526509	18592193	chr3:18526509-18592193	1	+	18526509	18526509	8553170	3	31,153,559,	0,664,65125,
#Partially deleted in new
chr3	18526525	18920401	chr3:18526525-18920401	1	+	18526525	18526525	8553170	8	15,153,117,39,41,103,106,239,	0,648,219428,237227,316610,320325,380175,393637,
#Partially deleted in new
chr3	18527171	18607187	chr3:18527171-18607187	0	+	18527171	18527171	8553170	5	155,56,143,39,189,	0,58215,58448,59698,79827,
#Partially deleted in new
chr3	18527181	18555725	chr3:18527181-18555725	0	+	18527181	18527181	8553170	3	145,130,335,	0,20882,28209,
#Partially deleted in new
chr3	18527181	18607186	chr3:18527181-18607186	0	+	18527181	18527181	8553170	3	145,205,188,	0,2799,79817,
#Partially deleted in new
chr3	18527181	18534892	chr3:18527181-18534892	0	+	18527181	18527181	8553170	4	65,64,205,206,	0,894,2799,7505,
#Partially deleted in new
chr3	18527181	18592028	chr3:18527181-18592028	0	+	18527181	18527181	8553170	3	145,143,394,	0,58438,64453,
#Deleted in new
chr3	18527181	18530249	chr3:18527181-18530249	0	+	18527181	18527181	8553170	3	65,64,269,	0,894,2799,
#Deleted in new
chr3	18527181	18530546	chr3:18527181-18530546	0	+	18527181	18527181	8553170	3	145,64,566,	0,894,2799,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	18527181	18607068	chr3:18527181-18607068	1	+	18527181	18527181	8553170	7	145,205,101,56,143,39,70,	0,2799,3757,58205,58438,59688,79817,
#Partially deleted in new
chr3	18527181	18534883	chr3:18527181-18534883	0	+	18527181	18527181	8553170	4	145,189,205,197,	0,769,2799,7505,
#Partially deleted in new
chr3	18527182	18607130	chr3:18527182-18607130	0	+	18527182	18527182	8553170	4	144,189,202,132,	0,768,2801,79816,
#Partially deleted in new
chr3	18527182	18591844	chr3:18527182-18591844	0	+	18527182	18527182	8553170	5	144,56,143,39,210,	0,58204,58437,59687,64452,
#Partially deleted in new
chr3	18527186	18607178	chr3:18527186-18607178	0	+	18527186	18527186	8553170	2	140,180,	0,79812,
#Partially deleted in new
chr3	18527268	18591919	chr3:18527268-18591919	1	+	18527268	18527268	8553170	5	58,130,152,39,285,	0,20795,58342,59601,64366,
#Deleted in new
chr3	18538672	18539899	chr3:18538672-18539899	7	+	18538672	18538672	16724991	1	1227,	0,
#Partially deleted in new
chr3	18548117	18607179	chr3:18548117-18607179	1	+	18548117	18548117	8553170	6	76,127,56,143,39,181,	0,36799,37269,37502,38752,58881,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	18745743	18747491	chr3:18745743-18747491	1	+	18745743	18745743	8553170	3	98,117,511,	0,210,1237,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	18954942	18955049	chr3:18954942-18955049	3	-	18954942	18954942	8553170	1	107,	0,
#Partially deleted in new
chr3	19148453	19535646	chr3:19148453-19535646	3	+	19148719	19534099	789624	16	342,234,132,128,241,158,208,198,200,250,215,39,356,107,77,2252,	0,105200,132744,194133,199271,242027,246650,289710,301652,302701,308314,361909,364516,366868,369544,384941,
#Partially deleted in new
chr3	19148533	19534739	chr3:19148533-19534739	0	+	19148719	19346669	789624	16	262,234,132,128,83,241,158,208,198,1299,215,39,356,107,77,1345,	0,105120,132664,194053,198118,199191,241947,246570,289630,301572,308234,361829,364436,366788,369464,384861,
#Deleted in new
chr3	19314847	19314931	chr3:19314847-19314931	3	-	19314847	19314847	5263520	1	84,	0,
#Partially deleted in new
chr3	19347720	19395277	chr3:19347720-19395277	0	+	19347720	19347720	8553170	4	245,158,75,174,	0,42760,43970,47383,
#Partially deleted in new
chr3	19879471	19934180	chr3:19879471-19934180	3	-	19879630	19934018	789624	13	333,182,213,208,155,68,84,130,111,181,144,63,951,	0,3078,4931,8972,17215,19306,19960,26148,35831,38760,40361,41033,53758,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	19879475	19947009	chr3:19879475-19947009	1	-	19879630	19936303	789624	15	329,182,213,208,155,68,84,130,111,181,144,63,236,194,91,	0,3074,4927,8968,17211,19302,19956,26144,35827,38756,40357,41029,53754,56665,67443,
#Partially deleted in new
chr3	19884361	19898824	chr3:19884361-19898824	0	-	19884361	19884361	8553170	3	254,155,47,	0,12325,14416,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	19894490	19934214	chr3:19894490-19934214	0	-	19894490	19894490	8553170	10	466,155,68,84,130,111,181,144,63,985,	0,2196,4287,4941,11129,20812,23741,25342,26014,38739,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	19896540	19934224	chr3:19896540-19934224	0	-	19896540	19934018	789624	9	301,68,84,130,111,181,144,63,995,	0,2237,2891,9079,18762,21691,23292,23964,36689,
#Partially deleted in new
chr3	19898776	19933292	chr3:19898776-19933292	0	-	19898776	19933292	789624	7	69,84,130,111,181,144,63,	0,655,6843,16526,19455,21056,34453,
#Partially deleted in new
chr3	19940268	19943310	chr3:19940268-19943310	7	-	19940268	19940268	16724991	3	1310,255,363,	0,1908,2679,
#Deleted in new
chr3	19945913	19947025	chr3:19945913-19947025	0	-	19945913	19945913	8553170	2	341,107,	0,1005,
#Partially deleted in new
chr3	19947078	19985175	chr3:19947078-19985175	3	+	19950898	19983823	0	6	443,256,152,123,94,1468,	0,3727,28522,28968,31231,36629,
#Partially deleted in new
chr3	19947249	19950944	chr3:19947249-19950944	0	+	19950898	19950944	789624	2	614,139,	0,3556,
#Partially deleted in new
chr3	19947378	19976103	chr3:19947378-19976103	0	+	19950898	19975612	789624	4	143,256,166,57,	0,3427,28208,28668,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	19947398	19984147	chr3:19947398-19984147	0	+	19950898	19970582	789624	7	123,256,170,152,123,94,440,	0,3407,23149,28202,28648,30911,36309,
#Partially deleted in new
chr3	19947404	19984450	chr3:19947404-19984450	1	+	19950898	19983823	0	6	117,256,110,123,94,743,	0,3401,28238,28642,30905,36303,
#Partially deleted in new
chr3	19947409	19951225	chr3:19947409-19951225	0	+	19947409	19947409	8553170	2	112,420,	0,3396,
#Partially deleted in new
chr3	19951000	19978891	chr3:19951000-19978891	0	+	19951000	19951000	8553170	4	61,152,123,582,	0,24600,25046,27309,
#Partially deleted in new
chr3	19975515	19984121	chr3:19975515-19984121	0	+	19975515	19975515	8553170	4	237,123,94,414,	0,531,2794,8192,
#Partially deleted in new
chr3	19979960	20012267	chr3:19979960-20012267	0	-	19984255	20012072	789624	4	214,103,1067,218,	0,4233,21069,32089,
#Partially deleted in new
chr3	19985379	20012330	chr3:19985379-20012330	3	-	19985379	20012072	789624	3	803,1067,281,	0,15650,26670,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	19996802	19996925	chr3:19996802-19996925	3	+	19996802	19996802	8553170	1	123,	0,
#Partially deleted in new
chr3	20000974	20012257	chr3:20000974-20012257	0	-	20000974	20000974	8553170	2	1122,208,	0,11075,
#Deleted in new
chr3	20007851	20008247	chr3:20007851-20008247	7	-	20007851	20007851	16724991	1	396,	0,
#Deleted in new
chr3	20012451	20012606	chr3:20012451-20012606	7	+	20012451	20012451	16724991	1	155,	0,
#Partially deleted in new
chr3	20040022	20154404	chr3:20040022-20154404	3	+	20040477	20152525	0	18	758,127,146,93,182,192,107,126,137,209,127,111,144,115,37,64,85,2073,	0,32310,55240,59839,61264,71573,74859,79575,82645,85882,87400,96919,100198,106293,107940,108220,108380,112309,
#Partially deleted in new
chr3	20040697	20101113	chr3:20040697-20101113	0	+	20040697	20040697	8553170	5	83,127,146,93,122,	0,31635,54565,59164,60294,
#Partially deleted in new
chr3	20111593	20122795	chr3:20111593-20122795	0	+	20111593	20111593	8553170	4	50,90,126,128,	0,3305,8004,11074,
#Partially deleted in new
chr3	20127477	20146581	chr3:20127477-20146581	0	+	20127477	20127477	8553170	4	72,111,144,266,	0,9464,12743,18838,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	20137564	20137641	chr3:20137564-20137641	3	+	20137564	20137564	5263520	1	77,	0,
#Deleted in new
chr3	20148239	20149010	chr3:20148239-20149010	0	+	20148239	20148239	8553170	2	67,608,	0,163,
#Partially deleted in new
chr3	20160592	20186191	chr3:20160592-20186191	1	-	20161104	20184027	0	9	634,92,190,807,59,77,197,149,133,	0,10131,10450,13656,16008,17678,23015,23293,25466,
#Partially deleted in new
chr3	20160592	20186191	chr3:20160592-20186191	3	-	20161104	20184027	0	8	634,92,190,59,77,197,149,133,	0,10131,10450,16008,17678,23015,23293,25466,
#Partially deleted in new
chr3	20160592	20186191	chr3:20160592-20186191	1	-	20161104	20184027	0	9	634,92,190,51,59,77,197,149,133,	0,10131,10450,14412,16008,17678,23015,23293,25466,
#Partially deleted in new
chr3	20161008	20186127	chr3:20161008-20186127	1	-	20161104	20184027	0	9	218,92,190,807,59,77,197,149,180,	0,9715,10034,13240,15592,17262,22599,22877,24939,
#Partially deleted in new
chr3	20161008	20186127	chr3:20161008-20186127	1	-	20161104	20184027	0	9	218,92,190,51,59,77,197,149,180,	0,9715,10034,13996,15592,17262,22599,22877,24939,
#Partially deleted in new
chr3	20161008	20186127	chr3:20161008-20186127	1	-	20161104	20184027	0	7	218,51,59,77,197,149,180,	0,13996,15592,17262,22599,22877,24939,
#Partially deleted in new
chr3	20161008	20186127	chr3:20161008-20186127	1	-	20161104	20184027	0	8	218,92,190,59,77,197,149,180,	0,9715,10034,15592,17262,22599,22877,24939,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	20169480	20186206	chr3:20169480-20186206	1	-	20170703	20184027	0	7	1335,190,59,77,197,149,259,	0,1562,7120,8790,14127,14405,16467,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	20170052	20186292	chr3:20170052-20186292	1	-	20170703	20184027	0	8	763,190,807,59,77,197,149,345,	0,990,4196,6548,8218,13555,13833,15895,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	20170060	20171267	chr3:20170060-20171267	0	-	20170060	20170060	8553170	2	755,225,	0,982,
#Partially deleted in new
chr3	20170484	20186191	chr3:20170484-20186191	1	-	20170703	20184027	0	8	331,190,51,59,77,197,149,133,	0,558,4520,6116,7786,13123,13401,15574,
#Partially deleted in new
chr3	20170643	20186127	chr3:20170643-20186127	1	-	20170703	20184027	0	8	172,190,51,59,77,197,149,180,	0,399,4361,5957,7627,12964,13242,15304,
#Partially deleted in new
chr3	20174243	20186427	chr3:20174243-20186427	1	+	20174243	20174243	8553170	3	282,84,453,	0,491,11731,
#Partially deleted in new
chr3	20174285	20186115	chr3:20174285-20186115	1	+	20174285	20174285	789624	4	240,84,34,141,	0,449,2931,11689,
#Partially deleted in new
chr3	20174721	20184032	chr3:20174721-20184032	0	-	20178280	20184027	789624	5	334,59,77,46,147,	0,1879,3549,9037,9164,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	20186354	20878835	chr3:20186354-20878835	3	+	20186354	20186354	8553170	17	304,62,107,97,407,93,58,68,55,126,61,78,162,49,48,71,525,	0,7995,36380,48250,159305,161642,164360,173167,174275,194820,513030,625553,631531,661880,683934,685569,691956,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	20268964	20269070	chr3:20268964-20269070	3	-	20268964	20268964	8553170	1	106,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	20388248	20390562	chr3:20388248-20390562	3	+	20388248	20388248	8553170	1	2314,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	20507643	20507756	chr3:20507643-20507756	3	-	20507643	20507643	8553170	1	113,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	20732383	21145967	chr3:20732383-21145967	1	+	20732383	20732383	8553170	8	117,48,96,118,141,148,137,872,	0,137905,173128,301942,309368,310592,352911,412712,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	21006729	21226305	chr3:21006729-21226305	3	-	21006729	21006729	8553170	3	1748,149,221,	0,217958,219355,
#Deleted in new
chr3	21405736	21406508	chr3:21405736-21406508	7	+	21405736	21405736	16724991	1	772,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	21412221	21751435	chr3:21412221-21751435	3	-	21421213	21750916	789624	8	9226,102,179,234,163,111,143,541,	0,11741,13270,24748,98639,152352,252664,338673,
#Partially deleted in new
chr3	21421378	21431124	chr3:21421378-21431124	0	-	21421378	21421378	8553170	4	69,102,179,85,	0,2584,4113,9661,
#Partially deleted in new
chr3	21436819	21510986	chr3:21436819-21510986	0	-	21436913	21510986	8553170	3	384,57,126,	0,4866,74041,
#Partially deleted in new
chr3	21437011	22372632	chr3:21437011-22372632	0	-	21564659	22372555	789624	7	192,118,163,111,64,219,183,	0,22320,73849,127562,412644,731805,935438,
#Partially deleted in new
chr3	21437076	21751114	chr3:21437076-21751114	0	-	21511721	21750916	789624	6	127,163,136,111,143,220,	0,73784,74545,127497,227809,313818,
#Partially deleted in new
chr3	21510860	22373193	chr3:21510860-22373193	0	-	21510860	22372555	789624	6	163,111,143,219,388,139,	0,53713,154025,657956,861589,862194,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	21542815	21579959	chr3:21542815-21579959	3	+	21542815	21542815	789624	3	180,193,332,	0,36373,36812,
#Partially deleted in new
chr3	21561918	21564686	chr3:21561918-21564686	0	-	21561918	21561918	8553170	2	177,113,	0,2655,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	21561918	21777776	chr3:21561918-21777776	0	-	21561918	21561918	8553170	5	177,51,111,143,169,	0,1343,2655,102967,215689,
#Partially deleted in new
chr3	21877839	22168951	chr3:21877839-22168951	0	-	21877839	21877839	8553170	2	319,135,	0,290977,
#Partially deleted in new
chr3	22133581	22169016	chr3:22133581-22169016	0	-	22133581	22133581	8553170	3	411,73,200,	0,737,35235,
#Partially deleted in new
chr3	22168492	22373321	chr3:22168492-22373321	0	-	22168492	22168492	8553170	2	543,40,	0,204789,
#Deleted in new
chr3	22381818	22382460	chr3:22381818-22382460	5	+	22381818	22381818	16724991	1	642,	0,
#Deleted in new
chr3	22381944	22382929	chr3:22381944-22382929	7	+	22381944	22381944	16724991	1	985,	0,
#Partially deleted in new
chr3	22670200	22670711	chr3:22670200-22670711	7	-	22670200	22670200	16724991	3	81,227,110,	0,107,401,
#Deleted in new
chr3	22811389	22812047	chr3:22811389-22812047	7	-	22811389	22811389	16724991	2	235,370,	0,288,
#Partially deleted in new
chr3	22904134	22905151	chr3:22904134-22905151	7	+	22904134	22904134	16724991	2	148,496,	0,521,
#Deleted in new
chr3	22989822	22991582	chr3:22989822-22991582	7	+	22989822	22989822	16724991	1	1760,	0,
#Deleted in new
chr3	23134371	23134824	chr3:23134371-23134824	7	+	23134371	23134371	16724991	1	453,	0,
#Partially deleted in new
chr3	23195069	23202543	chr3:23195069-23202543	0	-	23195069	23195069	8553170	2	345,152,	0,7322,
#Partially deleted in new
chr3	23195069	23202578	chr3:23195069-23202578	3	-	23195069	23195069	789624	2	345,154,	0,7355,
#Partially deleted in new
chr3	23195069	23202533	chr3:23195069-23202533	0	-	23195069	23195069	8553170	2	345,142,	0,7322,
#Partially deleted in new
chr3	23203019	23590222	chr3:23203019-23590222	1	+	23208699	23589831	0	6	243,184,51,133,148,489,	0,5672,14242,296588,329534,386714,
#Partially deleted in new
chr3	23203099	23532615	chr3:23203099-23532615	0	+	23208699	23532615	789624	6	163,184,51,72,133,62,	0,5592,14162,120415,296508,329454,
#Partially deleted in new
chr3	23203161	23590579	chr3:23203161-23590579	0	+	23208699	23532605	789624	5	101,184,51,148,846,	0,5530,14100,329392,386572,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	23203292	23591793	chr3:23203292-23591793	3	+	23208699	23589831	0	6	172,184,51,133,148,2060,	0,5399,13969,296315,329261,386441,
#Partially deleted in new
chr3	23203329	23271158	chr3:23203329-23271158	0	+	23203329	23203329	8553170	4	135,184,51,209,	0,5362,13932,67620,
#Partially deleted in new
chr3	23208699	23270989	chr3:23208699-23270989	1	+	23208699	23270989	789624	3	176,51,40,	0,8562,62250,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	23273806	23273910	chr3:23273806-23273910	3	+	23273806	23273806	8553170	1	104,	0,
#Deleted in new
chr3	23389660	23389909	chr3:23389660-23389909	7	-	23389660	23389660	16724991	1	249,	0,
#Partially deleted in new
chr3	23499605	23532700	chr3:23499605-23532700	1	+	23499605	23532700	789624	2	135,147,	0,32948,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	23613660	23613759	chr3:23613660-23613759	3	-	23613660	23613660	8553170	1	99,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	23641488	23641592	chr3:23641488-23641592	3	-	23641488	23641488	8553170	1	104,	0,
#Deleted in new
chr3	23804023	23806905	chr3:23804023-23806905	3	-	23804023	23804023	789624	2	691,87,	0,2795,
#Partially deleted in new
chr3	23805902	23891316	chr3:23805902-23891316	3	+	23807269	23890606	0	6	186,185,51,133,148,808,	0,1334,5557,81664,83209,84606,
#Deleted in new
chr3	23805954	23807888	chr3:23805954-23807888	0	+	23805954	23805954	8553170	2	134,652,	0,1282,
#Partially deleted in new
chr3	23805964	23891316	chr3:23805964-23891316	1	+	23807269	23890606	0	5	124,185,133,148,808,	0,1272,81602,83147,84544,
#Partially deleted in new
chr3	23805965	23887789	chr3:23805965-23887789	0	+	23805965	23805965	8553170	4	123,185,51,223,	0,1271,5494,81601,
#Deleted in new
chr3	23805983	23808835	chr3:23805983-23808835	0	+	23805983	23805983	8553170	3	105,185,142,	0,1253,2710,
#Partially deleted in new
chr3	23807088	23889216	chr3:23807088-23889216	0	+	23807269	23889216	789624	4	333,51,133,105,	0,4371,80478,82023,
#Partially deleted in new
chr3	23810442	23891314	chr3:23810442-23891314	1	+	23810475	23890606	0	5	86,51,133,148,806,	0,1017,77124,78669,80066,
#Partially deleted in new
chr3	23810442	23889426	chr3:23810442-23889426	1	+	23810475	23889378	789624	4	86,51,133,315,	0,1017,77124,78669,
#Partially deleted in new
chr3	23810794	23891089	chr3:23810794-23891089	0	+	23810794	23810794	8553170	5	225,51,133,148,581,	0,665,76772,78317,79714,
#Partially deleted in new
chr3	23811457	23891316	chr3:23811457-23891316	0	+	23811457	23890606	789624	5	53,133,24,148,808,	0,76109,76780,77654,79051,
#Partially deleted in new
chr3	23866270	23890872	chr3:23866270-23890872	0	+	23866270	23866270	8553170	4	212,133,148,364,	0,21296,22841,24238,
#Deleted in new
chr3	23878980	23879498	chr3:23878980-23879498	7	-	23878980	23878980	16724991	1	518,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	23891659	23916969	chr3:23891659-23916969	1	-	23893094	23910904	789624	5	1678,242,111,118,186,	0,9148,19151,19669,25124,
#Partially deleted in new
chr3	23892060	23916715	chr3:23892060-23916715	1	-	23893094	23910904	789624	4	1277,242,111,761,	0,8747,18750,23894,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	23892063	23946591	chr3:23892063-23946591	3	-	23893094	23910904	789624	5	1274,242,111,122,269,	0,8744,18747,19265,54259,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	23892080	23917065	chr3:23892080-23917065	1	-	23893094	23910904	789624	5	1257,242,111,122,282,	0,8727,18730,19248,24703,
#Partially deleted in new
chr3	23892082	23910925	chr3:23892082-23910925	1	-	23893094	23910904	789624	3	1255,242,115,	0,8725,18728,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	23892096	23916969	chr3:23892096-23916969	1	-	23893094	23910904	789624	5	1237,246,111,118,186,	0,8707,18714,19232,24687,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	23892306	23916963	chr3:23892306-23916963	1	-	23893094	23910904	789624	5	1027,246,111,118,103,	0,8497,18504,19022,24554,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	23892309	23916924	chr3:23892309-23916924	1	-	23893094	23910904	789624	5	1024,246,111,122,141,	0,8494,18501,19019,24474,
#Partially deleted in new
chr3	23893064	23916952	chr3:23893064-23916952	1	-	23893094	23910904	789624	4	273,242,111,169,	0,7743,17746,23719,
#Deleted in new
chr3	23916544	23920977	chr3:23916544-23920977	3	+	23917859	23919501	0	4	629,182,137,1782,	0,1305,1895,2651,
#Deleted in new
chr3	23916590	23919286	chr3:23916590-23919286	0	+	23917859	23919286	789624	4	178,182,137,91,	0,1259,1849,2605,
#Deleted in new
chr3	23916803	23920856	chr3:23916803-23920856	1	+	23917859	23919501	0	4	370,195,137,1661,	0,1033,1636,2392,
#Deleted in new
chr3	23916978	23919409	chr3:23916978-23919409	0	+	23917859	23919409	789624	4	117,182,137,214,	0,871,1461,2217,
#Deleted in new
chr3	23917130	23919830	chr3:23917130-23919830	1	+	23917859	23919501	0	4	109,182,137,635,	0,719,1309,2065,
#Deleted in new
chr3	23917131	23920989	chr3:23917131-23920989	1	+	23917859	23919501	0	4	108,182,137,1794,	0,718,1308,2064,
#Deleted in new
chr3	23917137	23919393	chr3:23917137-23919393	0	+	23917859	23919393	789624	4	36,195,137,198,	0,699,1302,2058,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	23917138	23924374	chr3:23917138-23924374	1	+	23917859	23921675	0	5	35,182,137,51,2777,	0,711,1301,2057,4459,
#Deleted in new
chr3	23917146	23919411	chr3:23917146-23919411	0	+	23917859	23919411	789624	4	27,182,144,209,	0,703,1293,2056,
#Deleted in new
chr3	23917147	23919547	chr3:23917147-23919547	1	+	23917859	23919501	0	5	26,133,182,137,352,	0,385,702,1292,2048,
#Deleted in new
chr3	23917147	23919552	chr3:23917147-23919552	1	+	23919366	23919501	789624	4	26,85,137,357,	0,799,1292,2048,
#Deleted in new
chr3	23917147	23919552	chr3:23917147-23919552	0	+	23917147	23917147	8553170	2	26,1703,	0,702,
#Deleted in new
chr3	23917147	23919551	chr3:23917147-23919551	0	+	23917147	23917147	8553170	2	1429,356,	0,2048,
#Deleted in new
chr3	23917147	23919552	chr3:23917147-23919552	1	+	23917859	23919501	0	4	148,182,137,357,	0,702,1292,2048,
#Deleted in new
chr3	23917147	23919537	chr3:23917147-23919537	1	+	23919366	23919501	789624	4	26,59,137,342,	0,825,1292,2048,
#Deleted in new
chr3	23917298	23919301	chr3:23917298-23919301	0	+	23917859	23919301	789624	4	146,182,137,106,	0,551,1141,1897,
#Deleted in new
chr3	23917704	23919551	chr3:23917704-23919551	1	+	23917859	23919501	0	3	327,137,356,	0,735,1491,
#Partially deleted in new
chr3	23945259	23980618	chr3:23945259-23980618	3	+	23945578	23977419	789624	8	335,267,89,145,629,186,211,3396,	0,9277,10777,14411,16717,19717,22553,31963,
#Partially deleted in new
chr3	23945374	23978497	chr3:23945374-23978497	0	+	23945578	23963304	789624	9	220,267,89,145,629,107,186,211,1275,	0,9162,10662,14296,16602,17849,19602,22438,31848,
#Partially deleted in new
chr3	23946120	23977543	chr3:23946120-23977543	0	+	23946120	23946120	8553170	8	133,267,89,145,629,186,211,321,	0,8416,9916,13550,15856,18856,21692,31102,
#Partially deleted in new
chr3	23954625	23962334	chr3:23954625-23962334	0	+	23954625	23954625	8553170	4	178,89,254,358,	0,1411,5045,7351,
#Partially deleted in new
chr3	23964763	23968013	chr3:23964763-23968013	0	+	23964763	23964763	8553170	2	399,201,	0,3049,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	24096268	24103223	chr3:24096268-24103223	0	-	24096268	24096268	8553170	4	1165,49,1106,644,	0,3147,4172,6311,
#Deleted in new
chr3	24096511	24097360	chr3:24096511-24097360	7	-	24096511	24096511	16724991	1	849,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	24099973	24103238	chr3:24099973-24103238	3	-	24099973	24099973	5263520	2	1573,659,	0,2606,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	24117152	24494822	chr3:24117152-24494822	1	-	24122883	24228959	0	10	5973,259,147,206,148,101,261,64,72,171,	0,10346,16163,26348,29522,35237,72921,111785,220147,377499,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	24118213	24494803	chr3:24118213-24494803	1	-	24122883	24228959	0	11	4912,259,147,206,148,101,261,64,146,72,117,	0,9285,15102,25287,28461,34176,71860,110724,179012,219086,376473,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	24119042	24486595	chr3:24119042-24486595	1	-	24122883	24228959	0	11	4083,259,147,206,148,101,261,64,72,173,196,	0,8456,14273,24458,27632,33347,71031,109895,218257,364880,367357,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	24119055	24495532	chr3:24119055-24495532	1	-	24122883	24228959	0	11	4070,259,147,206,148,101,261,64,72,173,91,	0,8443,14260,24445,27619,33334,71018,109882,218244,364867,376386,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	24119067	24495756	chr3:24119067-24495756	1	-	24122883	24228959	0	10	4058,259,147,206,148,101,261,64,72,183,	0,8431,14248,24433,27607,33322,71006,109870,218232,376506,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	24119070	24495572	chr3:24119070-24495572	1	-	24122883	24228959	0	10	4055,259,147,206,148,101,261,64,72,131,	0,8428,14245,24430,27604,33319,71003,109867,218229,376371,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	24119071	24494880	chr3:24119071-24494880	1	-	24122883	24228959	0	11	4054,259,147,206,148,101,261,64,91,72,86,	0,8427,14244,24429,27603,33318,71002,109866,118919,218228,375723,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	24119168	24494881	chr3:24119168-24494881	0	-	24144867	24228959	789624	10	3957,259,147,1396,148,101,261,64,72,195,	0,8330,14147,24332,27506,33221,70905,109769,218131,375518,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	24119189	24494828	chr3:24119189-24494828	1	-	24122883	24228959	0	11	3936,259,147,206,148,101,261,64,146,72,177,	0,8309,14126,24311,27485,33200,70884,109748,178036,218110,375462,
#Partially deleted in new
chr3	24122207	24494811	chr3:24122207-24494811	1	-	24122883	24228959	0	12	918,259,147,206,148,101,261,64,98,137,72,160,	0,5291,11108,21293,24467,30182,67866,106730,175018,196150,215092,372444,
#Partially deleted in new
chr3	24122770	24494731	chr3:24122770-24494731	1	-	24122883	24228959	0	11	355,259,147,206,148,101,261,64,146,72,45,	0,4728,10545,20730,23904,29619,67303,106167,174455,214529,371916,
#Partially deleted in new
chr3	24122837	24165595	chr3:24122837-24165595	3	-	24122883	24165354	0	7	288,259,147,206,148,101,569,	0,4661,10478,20663,23837,29552,42189,
#Partially deleted in new
chr3	24146717	24495005	chr3:24146717-24495005	0	-	24146717	24190263	789624	6	105,101,261,146,72,211,	0,5672,43356,150508,190582,348077,
#Partially deleted in new
chr3	24152407	24494751	chr3:24152407-24494751	0	-	24152407	24228959	789624	7	83,261,64,137,72,72,65,	0,37666,76530,165950,184892,277693,342279,
#Partially deleted in new
chr3	24152430	24494797	chr3:24152430-24494797	0	-	24152430	24228959	789624	5	60,261,64,72,111,	0,37643,76507,184869,342256,
#Partially deleted in new
chr3	24152462	24495282	chr3:24152462-24495282	0	-	24152462	24228959	789624	5	28,261,64,72,150,	0,37611,76475,184837,342670,
#Partially deleted in new
chr3	24190153	24494771	chr3:24190153-24494771	0	-	24190153	24228959	789624	5	181,64,137,72,85,	0,38784,128204,147146,304533,
#Partially deleted in new
chr3	24190167	24494803	chr3:24190167-24494803	0	-	24190167	24228959	789624	5	167,64,137,72,152,	0,38770,128190,147132,304484,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	24228959	24348902	chr3:24228959-24348902	0	-	24228959	24228959	8553170	4	42,137,72,345,	0,89398,108340,119598,
#Deleted in new
chr3	24430747	24431107	chr3:24430747-24431107	7	+	24430747	24430747	16724991	1	360,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	24455135	24459434	chr3:24455135-24459434	3	-	24455135	24455135	8553170	2	296,1458,	0,2841,
#Partially deleted in new
chr3	24494086	24500342	chr3:24494086-24500342	1	+	24494086	24494086	789624	2	405,811,	0,5445,
#Deleted in new
chr3	24494307	24497181	chr3:24494307-24497181	1	+	24494307	24494307	8553170	2	184,518,	0,2356,
#Partially deleted in new
chr3	24494435	24499580	chr3:24494435-24499580	0	+	24494435	24494435	8553170	3	56,155,49,	0,2228,5096,
#Partially deleted in new
chr3	24494478	24523228	chr3:24494478-24523228	0	+	24494478	24494478	8553170	3	13,146,537,	0,5053,28213,
#Partially deleted in new
chr3	24494478	24516661	chr3:24494478-24516661	0	+	24494478	24494478	8553170	3	13,146,693,	0,5053,21490,
#Partially deleted in new
chr3	24495376	24499580	chr3:24495376-24499580	0	+	24495376	24495376	8553170	3	107,155,49,	0,1287,4155,
#Partially deleted in new
chr3	24495956	24499618	chr3:24495956-24499618	0	+	24495956	24495956	8553170	3	228,155,87,	0,707,3575,
#Partially deleted in new
chr3	24496183	24523228	chr3:24496183-24523228	3	+	24496183	24496183	8553170	3	635,146,537,	0,3348,26508,
#Partially deleted in new
chr3	24496271	24499580	chr3:24496271-24499580	3	-	24496271	24496271	8553170	2	742,67,	0,3242,
#Partially deleted in new
chr3	24496548	24516259	chr3:24496548-24516259	1	+	24496548	24496548	8553170	4	270,143,146,291,	0,2683,2983,19420,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	24498624	24499618	chr3:24498624-24499618	0	+	24498624	24498624	8553170	2	750,87,	0,907,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	24499543	24681711	chr3:24499543-24681711	0	+	24499543	24499543	8553170	5	134,345,60,57,1396,	0,34087,47648,89473,180772,
#Deleted in new
chr3	24521361	24521435	chr3:24521361-24521435	3	-	24521361	24521361	5263520	1	74,	0,
#Deleted in new
chr3	24555833	24556459	chr3:24555833-24556459	7	+	24555833	24555833	16724991	1	626,	0,
#Partially deleted in new
chr3	24687918	25174305	chr3:24687918-25174305	3	+	24687918	24687918	8553170	6	77,55,134,79,52,187,	0,74321,145170,170755,372206,486200,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	25020165	25020463	chr3:25020165-25020463	3	-	25020165	25020165	8553170	1	298,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	25025006	25025126	chr3:25025006-25025126	7	+	25025006	25025006	16724991	1	120,	0,
#Partially deleted in new
chr3	25174331	25596455	chr3:25174331-25596455	0	+	25174397	25596455	789624	8	244,149,142,161,177,205,159,36,	0,286861,326850,395426,406214,419171,420188,422088,
#Deleted in new
chr3	25324173	25324659	chr3:25324173-25324659	7	+	25324173	25324173	16724991	1	486,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	25352283	25352392	chr3:25352283-25352392	7	-	25352283	25352283	16724991	1	109,	0,
#Partially deleted in new
chr3	25428262	25597932	chr3:25428262-25597932	1	+	25501211	25596616	789624	8	269,149,142,161,177,205,159,1513,	0,32930,72919,141495,152283,165240,166257,168157,
#Partially deleted in new
chr3	25428310	25597932	chr3:25428310-25597932	3	+	25428731	25596616	789624	8	578,149,142,161,177,205,159,1513,	0,32882,72871,141447,152235,165192,166209,168109,
#Partially deleted in new
chr3	25428700	25462545	chr3:25428700-25462545	0	+	25428700	25428700	8553170	3	188,149,237,	0,32492,33608,
#Partially deleted in new
chr3	25428715	25596649	chr3:25428715-25596649	0	+	25428715	25428715	8553170	8	173,149,142,161,177,67,159,230,	0,32477,72466,141042,151830,164925,165804,167704,
#Partially deleted in new
chr3	25428715	25596649	chr3:25428715-25596649	0	+	25428715	25428715	8553170	7	173,149,142,177,205,159,230,	0,32477,72466,151830,164787,165804,167704,
#Partially deleted in new
chr3	25428715	25596649	chr3:25428715-25596649	0	+	25428715	25428715	8553170	7	173,149,142,161,177,159,230,	0,32477,72466,141042,151830,165804,167704,
#Deleted in new
chr3	25441163	25441502	chr3:25441163-25441502	7	-	25441163	25441163	16724991	1	339,	0,
#Partially deleted in new
chr3	25458309	25597932	chr3:25458309-25597932	1	+	25501211	25596616	789624	8	84,149,142,161,177,205,159,1513,	0,2883,42872,111448,122236,135193,136210,138110,
#Deleted in new
chr3	25555542	25555606	chr3:25555542-25555606	3	-	25555542	25555542	8553170	1	64,	0,
#Partially deleted in new
chr3	25597904	25664372	chr3:25597904-25664372	1	-	25598306	25664297	0	36	573,95,126,111,80,205,162,145,195,84,156,92,196,201,135,232,149,122,115,93,110,106,111,126,158,139,138,102,174,213,98,146,64,91,171,144,	0,1530,3195,6855,8138,9266,11278,11663,14610,17300,17526,20513,20749,21957,22777,25610,26392,26777,28655,28867,29282,30942,31130,32124,32407,32896,34541,34788,35936,38031,39310,40260,44417,45789,47395,66324,
#Partially deleted in new
chr3	25597983	25618849	chr3:25597983-25618849	0	-	25615569	25618849	789624	12	494,95,126,111,80,205,162,145,195,84,156,196,	0,1451,3116,6776,8059,9187,11199,11584,14531,17221,17447,20670,
#Partially deleted in new
chr3	25597985	25664499	chr3:25597985-25664499	3	-	25598306	25664297	0	36	492,95,126,111,80,205,162,145,195,84,156,92,196,201,135,232,149,122,115,93,110,106,111,126,158,139,138,102,174,213,98,146,64,91,156,271,	0,1449,3114,6774,8057,9185,11197,11582,14529,17219,17445,20432,20668,21876,22696,25529,26311,26696,28574,28786,29201,30861,31049,32043,32326,32815,34460,34707,35855,37950,39229,40179,44336,45708,47314,66243,
#Partially deleted in new
chr3	25612570	25615941	chr3:25612570-25615941	0	-	25612570	25612570	8553170	4	139,84,156,161,	0,2634,2860,3210,
#Partially deleted in new
chr3	25615472	25664907	chr3:25615472-25664907	0	-	25615472	25664297	789624	27	114,92,196,201,135,232,149,122,115,93,110,106,111,126,158,139,138,102,174,213,98,146,64,91,156,112,32,	0,2945,3181,4389,5209,8042,8824,9209,11087,11299,11714,13374,13562,14556,14839,15328,16973,17220,18368,20463,21742,22692,26849,28221,29827,48756,49403,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	25618131	25618312	chr3:25618131-25618312	3	-	25618131	25618131	8553170	1	181,	0,
#Deleted in new
chr3	25624351	25625038	chr3:25624351-25625038	0	-	25624351	25624351	8553170	2	94,357,	0,330,
#Partially deleted in new
chr3	25627056	25630155	chr3:25627056-25630155	0	-	25627056	25627056	8553170	4	240,106,111,127,	0,1790,1978,2972,
#Deleted in new
chr3	25664872	25664939	chr3:25664872-25664939	3	-	25664872	25664872	5263520	1	67,	0,
#Deleted in new
chr3	25686895	25687123	chr3:25686895-25687123	7	+	25686895	25686895	16724991	1	228,	0,
#Partially deleted in new
chr3	25718943	25730550	chr3:25718943-25730550	0	-	25718943	25718943	8553170	3	692,178,1418,	0,1070,10189,
#Partially deleted in new
chr3	25718944	25783498	chr3:25718944-25783498	1	-	25719459	25783390	0	12	691,178,186,165,111,92,122,223,166,246,115,239,	0,1069,10188,13374,14927,17364,18389,20632,32153,45121,59629,64315,
#Partially deleted in new
chr3	25719112	25783551	chr3:25719112-25783551	3	-	25719459	25783390	0	12	523,178,186,165,111,146,122,223,166,246,115,292,	0,901,10020,13206,14759,16891,18221,20464,31985,44953,59461,64147,
#Partially deleted in new
chr3	25719269	25783414	chr3:25719269-25783414	0	-	25719269	25719269	8553170	11	366,178,186,165,111,1147,223,166,246,115,155,	0,744,9863,13049,14602,17039,20307,31828,44796,59304,63990,
#Partially deleted in new
chr3	25719270	25783438	chr3:25719270-25783438	1	-	25719569	25783390	0	11	365,186,165,111,146,122,223,166,246,115,179,	0,9862,13048,14601,16733,18063,20306,31827,44795,59303,63989,
#Partially deleted in new
chr3	25719274	25733984	chr3:25719274-25733984	0	-	25719274	25719274	8553170	4	361,62,186,113,	0,855,9858,14597,
#Partially deleted in new
chr3	25719275	25783381	chr3:25719275-25783381	0	-	25719459	25783381	789624	12	360,178,186,165,111,92,122,223,166,246,115,122,	0,738,9857,13043,14596,17033,18058,20301,31822,44790,59298,63984,
#Partially deleted in new
chr3	25719278	25783364	chr3:25719278-25783364	0	-	25737366	25783364	789624	11	357,178,186,165,111,146,122,166,246,115,105,	0,735,9854,13040,14593,16725,18055,31819,44787,59295,63981,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	25719278	25736346	chr3:25719278-25736346	0	-	25719278	25719278	8553170	4	357,178,186,2475,	0,735,9854,14593,
#Partially deleted in new
chr3	25719410	25790039	chr3:25719410-25790039	1	-	25719459	25789865	0	12	225,178,186,165,111,146,122,223,166,246,115,179,	0,603,9722,12908,14461,16593,17923,20166,31687,44655,59163,70450,
#Partially deleted in new
chr3	25749487	25749896	chr3:25749487-25749896	7	+	25749487	25749487	16724991	1	409,	0,
#Partially deleted in new
chr3	25751180	25782872	chr3:25751180-25782872	0	-	25751180	25778588	789624	4	83,246,115,135,	0,12885,27393,31557,
#Deleted in new
chr3	25754924	25755670	chr3:25754924-25755670	7	+	25754924	25754924	16724991	1	746,	0,
#Partially deleted in new
chr3	25764128	25784156	chr3:25764128-25784156	0	-	25764128	25764128	8553170	4	183,140,115,114,	0,13572,14445,19914,
#Partially deleted in new
chr3	25777700	25783482	chr3:25777700-25783482	0	-	25777700	25777700	8553170	3	140,115,223,	0,873,5559,
#Partially deleted in new
chr3	25778261	25783414	chr3:25778261-25783414	0	-	25778261	25778261	8553170	2	427,155,	0,4998,
#Partially deleted in new
chr3	25778640	25783414	chr3:25778640-25783414	0	-	25778640	25778640	8553170	2	48,522,	0,4252,
#Deleted in new
chr3	25782916	25784109	chr3:25782916-25784109	0	+	25782916	25782916	8553170	2	364,46,	0,1147,
#Partially deleted in new
chr3	25783038	25789986	chr3:25783038-25789986	0	+	25783038	25783038	8553170	2	242,220,	0,6728,
#Partially deleted in new
chr3	25783072	25791680	chr3:25783072-25791680	0	+	25791020	25791680	789624	2	208,691,	0,7917,
#Partially deleted in new
chr3	25790079	25794534	chr3:25790079-25794534	3	+	25791020	25794494	0	3	68,1008,443,	0,910,4012,
#Partially deleted in new
chr3	25790089	25794523	chr3:25790089-25794523	0	+	25791020	25791783	789624	4	58,326,228,432,	0,900,1680,4002,
#Partially deleted in new
chr3	25790093	25794534	chr3:25790093-25794534	1	+	25791020	25794494	0	4	54,707,52,443,	0,896,1852,3998,
#Deleted in new
chr3	25790479	25791841	chr3:25790479-25791841	0	+	25790479	25790479	8553170	3	337,326,72,	0,510,1290,
#Deleted in new
chr3	25790785	25791714	chr3:25790785-25791714	0	+	25791020	25791714	789624	2	31,725,	0,204,
#Deleted in new
chr3	25791020	25791783	chr3:25791020-25791783	1	+	25791020	25791783	789624	2	295,14,	0,749,
#Partially deleted in new
chr3	25858653	25873700	chr3:25858653-25873700	0	-	25858653	25858653	8553170	5	145,121,96,132,60,	0,11361,13147,13661,14987,
#Deleted in new
chr3	26015668	26016369	chr3:26015668-26016369	7	+	26015668	26015668	16724991	1	701,	0,
#Partially deleted in new
chr3	26216321	26216877	chr3:26216321-26216877	7	+	26216321	26216321	16724991	1	556,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	26346680	26347638	chr3:26346680-26347638	7	-	26346680	26346680	16724991	1	958,	0,
#Partially deleted in new
chr3	26619329	26622690	chr3:26619329-26622690	3	-	26619329	26619329	8553170	4	177,147,40,90,	0,372,1603,3271,
#Partially deleted in new
chr3	26622805	26710776	chr3:26622805-26710776	3	+	26709672	26710452	0	2	432,1264,	0,86707,
#Partially deleted in new
chr3	26623699	26709836	chr3:26623699-26709836	0	+	26709672	26709836	789624	2	165,324,	0,85813,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	26623990	26717537	chr3:26623990-26717537	0	+	26709672	26710452	789624	5	62,895,3236,555,2165,	0,31919,85522,89234,91382,
#Partially deleted in new
chr3	26624080	26710161	chr3:26624080-26710161	0	+	26709672	26710161	789624	2	278,649,	0,85432,
#Partially deleted in new
chr3	26624666	26710776	chr3:26624666-26710776	1	+	26709672	26710452	0	3	103,328,1264,	0,517,84846,
#Partially deleted in new
chr3	26624677	26709583	chr3:26624677-26709583	0	+	26624677	26624677	8553170	2	834,71,	0,84835,
#Partially deleted in new
chr3	26694554	26710776	chr3:26694554-26710776	1	+	26709672	26710452	0	3	215,72,1264,	0,6670,14958,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	27110084	27216475	chr3:27110084-27216475	1	-	27111271	27215757	789624	17	1236,56,53,109,111,101,30,141,38,55,87,184,214,71,130,149,106,	0,5855,5990,9675,21795,31397,33360,52376,52616,61734,64354,64565,81944,91425,92343,105647,106285,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	27110902	27216475	chr3:27110902-27216475	1	-	27111271	27215757	789624	16	418,56,53,109,111,101,141,38,55,87,184,214,71,130,149,106,	0,5037,5172,8857,20977,30579,51558,51798,60916,63536,63747,81126,90607,91525,104829,105467,
#Partially deleted in new
chr3	27110903	27369392	chr3:27110903-27369392	3	-	27111271	27352882	789624	39	417,56,53,109,111,101,30,141,38,55,87,184,214,71,130,76,103,122,46,138,129,103,65,78,62,140,225,87,80,68,79,42,85,99,131,61,108,158,168,	0,5036,5171,8856,20976,30578,32541,51557,51797,60915,63535,63746,81125,90606,91524,145392,173698,173936,176794,179713,180358,180580,182684,184709,186275,190792,193843,196955,198022,200045,201195,203393,211273,233368,235182,241561,241908,252783,258321,
#Partially deleted in new
chr3	27111271	27202556	chr3:27111271-27202556	1	-	27111271	27202556	789624	13	49,56,53,109,111,101,38,55,87,184,214,71,129,	0,4668,4803,8488,20608,30210,51429,60547,63167,63378,80757,90238,91156,
#Partially deleted in new
chr3	27131951	27194676	chr3:27131951-27194676	0	-	27131951	27131951	8553170	8	39,101,38,55,87,184,214,140,	0,9530,30749,39867,42487,42698,60077,62585,
#Partially deleted in new
chr3	27162265	27291493	chr3:27162265-27291493	0	-	27162265	27162265	8553170	14	336,38,55,87,184,214,71,130,76,103,122,46,129,10,	0,435,9553,12173,12384,29763,39244,40162,94030,122336,122574,125432,128996,129218,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	27174440	27194231	chr3:27174440-27194231	0	-	27174440	27174440	8553170	4	85,184,214,171,	0,209,17588,19620,
#Deleted in new
chr3	27214815	27215018	chr3:27214815-27215018	7	-	27214815	27214815	16724991	1	203,	0,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr3	27215606	27369421	chr3:27215606-27369421	1	-	27215831	27352882	789624	25	274,76,103,122,46,138,129,103,65,78,62,140,225,87,80,68,79,42,85,99,131,61,108,40,197,	0,40689,68995,69233,72091,75010,75655,75877,77981,80006,81572,86089,89140,92252,93319,95342,96492,98690,106570,128665,130479,136858,137205,151916,153618,
#Partially deleted in new
chr3	27255111	27291557	chr3:27255111-27291557	0	-	27255264	27291557	789624	7	193,76,103,122,46,129,74,	0,1184,29490,29728,32586,36150,36372,
#Partially deleted in new
chr3	27255111	27290728	chr3:27255111-27290728	0	-	27255264	27290728	789624	6	193,76,103,122,46,112,	0,1184,29490,29728,32586,35505,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	27265579	27265683	chr3:27265579-27265683	3	-	27265579	27265579	8553170	1	104,	0,
#Partially deleted in new
chr3	27278687	27284901	chr3:27278687-27284901	0	-	27278687	27278687	8553170	3	286,103,62,	0,5914,6152,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	27309156	27369196	chr3:27309156-27369196	0	-	27309156	27309156	8553170	8	3021,42,85,99,131,61,108,166,	0,5140,13020,35115,36929,43308,43655,59874,
#Partially deleted in new
chr3	27322225	27369460	chr3:27322225-27369460	0	-	27322225	27352882	789624	6	36,99,131,61,108,236,	0,22046,23860,30239,30586,46999,
#Partially deleted in new
chr3	27372720	27484420	chr3:27372720-27484420	1	-	27376763	27484099	789624	28	4125,98,132,174,2,73,252,162,114,162,106,246,134,175,107,147,88,158,116,19,356,25,128,161,139,147,82,342,	0,10432,13171,17210,17590,19015,21797,22233,24963,25471,28043,30418,32109,36635,38921,45765,47979,48901,51316,55547,58593,60446,61256,63667,64667,75930,79696,111358,
#Partially deleted in new
chr3	27372722	27456754	chr3:27372722-27456754	1	-	27376763	27456683	789624	25	4123,98,132,174,69,252,162,114,162,106,246,134,175,107,147,88,158,116,372,189,161,139,147,82,104,	0,10430,13169,17208,19017,21795,22231,24961,25469,28041,30416,32107,36633,38919,45763,47977,48899,51314,58575,61193,63665,64665,75928,79694,83928,
#Partially deleted in new
chr3	27372722	27424086	chr3:27372722-27424086	0	-	27376763	27424086	789624	18	4123,108,98,132,174,69,252,162,114,162,106,246,134,175,107,147,88,50,	0,6526,10430,13169,17208,19017,21795,22231,24961,25469,28041,30416,32107,36633,38919,45763,47977,51314,
#Partially deleted in new
chr3	27372722	27456754	chr3:27372722-27456754	1	-	27376763	27456683	789624	24	4123,98,132,174,69,252,162,114,162,106,246,134,175,107,147,88,158,116,189,161,139,147,82,104,	0,10430,13169,17208,19017,21795,22231,24961,25469,28041,30416,32107,36633,38919,45763,47977,48899,51314,61193,63665,64665,75928,79694,83928,
#Partially deleted in new
chr3	27376605	27484347	chr3:27376605-27484347	3	-	27376763	27484126	789624	24	240,98,132,174,69,252,162,114,162,106,246,134,175,107,147,88,158,116,189,161,139,147,82,269,	0,6547,9286,13325,15134,17912,18348,21078,21586,24158,26533,28224,32750,35036,41880,44094,45016,47431,57310,59782,60782,72045,75811,107473,
#Partially deleted in new
chr3	27376605	27484347	chr3:27376605-27484347	0	-	27404953	27484126	789624	24	240,98,132,174,69,252,162,114,162,106,246,134,107,147,88,158,116,372,150,161,139,147,82,269,	0,6547,9286,13325,15134,17912,18348,21078,21586,24158,26533,28224,35036,41880,44094,45016,47431,54692,57349,59782,60782,72045,75811,107473,
#Partially deleted in new
chr3	27376605	27484347	chr3:27376605-27484347	1	-	27376763	27484126	789624	26	240,108,98,132,174,69,252,162,114,162,106,246,134,175,107,147,88,158,116,372,150,161,139,147,82,281,	0,2643,6547,9286,13325,15134,17912,18348,21078,21586,24158,26533,28224,32750,35036,41880,44094,45016,47431,54692,57349,59782,60782,72045,75811,107461,
#Partially deleted in new
chr3	27376605	27484396	chr3:27376605-27484396	1	-	27376763	27484126	789624	25	240,98,132,174,69,252,162,114,162,106,246,134,175,107,147,88,158,116,372,150,161,139,147,82,330,	0,6547,9286,13325,15134,17912,18348,21078,21586,24158,26533,28224,32750,35036,41880,44094,45016,47431,54692,57349,59782,60782,72045,75811,107461,
#Partially deleted in new
chr3	27376605	27484347	chr3:27376605-27484347	1	-	27376763	27484126	789624	25	240,98,132,174,69,252,162,114,162,106,246,134,175,107,147,88,158,116,372,150,161,139,147,82,269,	0,6547,9286,13325,15134,17912,18348,21078,21586,24158,26533,28224,32750,35036,41880,44094,45016,47431,54692,57349,59782,60782,72045,75811,107473,
#Partially deleted in new
chr3	27376605	27484347	chr3:27376605-27484347	1	-	27376763	27484126	789624	26	240,108,98,132,174,69,252,162,114,162,106,246,134,175,107,147,88,158,116,372,189,161,139,147,82,281,	0,2643,6547,9286,13325,15134,17912,18348,21078,21586,24158,26533,28224,32750,35036,41880,44094,45016,47431,54692,57310,59782,60782,72045,75811,107461,
#Partially deleted in new
chr3	27376605	27484347	chr3:27376605-27484347	1	-	27376763	27484126	789624	25	240,108,98,132,174,69,252,162,114,162,106,246,134,175,107,147,88,158,116,189,161,139,147,82,269,	0,2643,6547,9286,13325,15134,17912,18348,21078,21586,24158,26533,28224,32750,35036,41880,44094,45016,47431,57310,59782,60782,72045,75811,107473,
#Partially deleted in new
chr3	27376605	27484347	chr3:27376605-27484347	0	-	27404953	27484126	789624	24	240,108,98,132,174,69,252,162,114,162,106,246,134,107,147,88,158,116,189,161,139,147,82,269,	0,2643,6547,9286,13325,15134,17912,18348,21078,21586,24158,26533,28224,35036,41880,44094,45016,47431,57310,59782,60782,72045,75811,107473,
#Partially deleted in new
chr3	27376728	27391845	chr3:27376728-27391845	0	-	27376728	27376728	8553170	6	117,108,98,132,174,106,	0,2520,6424,9163,13202,15011,
#Partially deleted in new
chr3	27376763	27484420	chr3:27376763-27484420	0	-	27404953	27484126	789624	23	82,98,132,174,69,252,162,114,162,106,246,134,107,147,88,158,116,189,161,139,147,82,342,	0,6389,9128,13167,14976,17754,18190,20920,21428,24000,26375,28066,34878,41722,43936,44858,47273,57152,59624,60624,71887,75653,107315,
#Partially deleted in new
chr3	27385891	27456754	chr3:27385891-27456754	0	-	27385891	27456683	789624	23	132,174,69,252,162,114,162,106,246,134,175,107,147,88,158,60,116,189,161,139,147,82,104,	0,4039,5848,8626,9062,11792,12300,14872,17247,18938,23464,25750,32594,34808,35730,36889,38145,48024,50496,51496,62759,66525,70759,
#Partially deleted in new
chr3	27397864	27401044	chr3:27397864-27401044	0	-	27397864	27397864	8553170	2	489,281,	0,2899,
#Partially deleted in new
chr3	27421671	27424502	chr3:27421671-27424502	0	-	27421671	27421671	8553170	2	108,466,	0,2365,
#Partially deleted in new
chr3	27423640	27484420	chr3:27423640-27484420	0	-	27423640	27423640	8553170	7	512,189,161,139,147,82,342,	0,10275,12747,13747,25010,28776,60438,
#Partially deleted in new
chr3	27462505	27462816	chr3:27462505-27462816	7	+	27462505	27462505	16724991	1	311,	0,
#Deleted in new
chr3	27486246	27486617	chr3:27486246-27486617	7	+	27486246	27486246	16724991	1	371,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	27513870	27514032	chr3:27513870-27514032	3	+	27513870	27513870	8553170	1	162,	0,
#Deleted in new
chr3	27525352	27525394	chr3:27525352-27525394	7	+	27525352	27525352	16724991	1	42,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	27547756	27547858	chr3:27547756-27547858	3	-	27547756	27547756	8553170	1	102,	0,
#Deleted in new
chr3	27624201	27624456	chr3:27624201-27624456	7	-	27624201	27624201	16724991	1	255,	0,
#Partially deleted in new
chr3	27632975	27633720	chr3:27632975-27633720	5	+	27632975	27632975	16724991	1	745,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	27633597	27635427	chr3:27633597-27635427	7	+	27633597	27633597	16724991	1	1830,	0,
#Deleted in new
chr3	27638314	27638776	chr3:27638314-27638776	3	+	27638314	27638314	8553170	1	462,	0,
#Deleted in new
chr3	27703128	27703568	chr3:27703128-27703568	7	-	27703128	27703128	16724991	1	440,	0,
#Deleted in new
chr3	27712909	27714005	chr3:27712909-27714005	3	+	27712909	27712909	8553170	1	1096,	0,
#Deleted in new
chr3	27715948	27722498	chr3:27715948-27722498	3	-	27717069	27722294	789624	6	1803,62,159,122,155,1085,	0,2638,2786,3411,4222,5465,
#Deleted in new
chr3	27716376	27722312	chr3:27716376-27722312	1	-	27717069	27722294	789624	6	1432,62,159,122,155,899,	0,2210,2358,2983,3794,5037,
#Deleted in new
chr3	27716508	27722711	chr3:27716508-27722711	1	-	27717069	27720321	789624	6	1300,62,159,122,155,282,	0,2078,2226,2851,3662,5921,
#Partially deleted in new
chr3	27797562	27931579	chr3:27797562-27931579	3	+	27797562	27797562	8553170	8	349,87,99,65,89,140,259,731,	0,5201,27087,93532,98695,110385,116740,133286,
#Partially deleted in new
chr3	27802761	27860327	chr3:27802761-27860327	1	+	27802761	27802761	8553170	4	89,99,64,241,	0,21888,45939,57325,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	27821487	27891301	chr3:27821487-27891301	0	+	27821487	27821487	8553170	3	237,99,207,	0,3162,69607,
#Partially deleted in new
chr3	27821597	27860192	chr3:27821597-27860192	0	+	27821597	27821597	8553170	3	127,99,106,	0,3052,38489,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	27830887	27834136	chr3:27830887-27834136	3	-	27830887	27830887	789624	2	2695,138,	0,3111,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	27916773	28010564	chr3:27916773-28010564	3	-	27916773	27916773	8553170	7	209,148,90,121,123,40,95,	0,501,12283,14061,50512,70596,93696,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	27985566	27989314	chr3:27985566-27989314	1	-	27985566	27985566	8553170	3	957,40,234,	0,1803,3514,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	27997209	28059268	chr3:27997209-28059268	1	-	27997209	27997209	8553170	3	659,95,27,	0,31299,62032,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	27997543	28059268	chr3:27997543-28059268	0	-	27997543	27997543	8553170	4	325,95,95,27,	0,12926,30965,61698,
#Partially deleted in new
chr3	28241583	28319762	chr3:28241583-28319762	0	+	28241583	28241583	8553170	3	229,90,3430,	0,21707,74749,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	28241594	28325142	chr3:28241594-28325142	3	+	28241793	28319629	789624	4	218,90,91,5634,	0,21696,74738,77914,
#Partially deleted in new
chr3	28241617	28319771	chr3:28241617-28319771	1	+	28241793	28319629	789624	3	195,91,263,	0,74715,77891,
#Partially deleted in new
chr3	28241623	28319773	chr3:28241623-28319773	0	+	28241793	28263326	789624	4	278,90,91,265,	0,21667,74709,77885,
#Partially deleted in new
chr3	28241623	28319773	chr3:28241623-28319773	0	+	28241623	28241623	8553170	5	189,35,90,91,265,	0,12107,21667,74709,77885,
#Partially deleted in new
chr3	28263111	28319741	chr3:28263111-28319741	0	+	28263111	28263111	8553170	3	269,91,233,	0,53221,56397,
#Partially deleted in new
chr3	28291800	28316407	chr3:28291800-28316407	0	+	28291800	28291800	8553170	4	154,229,93,75,	0,935,2633,24532,
#Partially deleted in new
chr3	28291847	28319770	chr3:28291847-28319770	0	+	28291847	28291847	8553170	4	107,91,148,262,	0,24485,26884,27661,
#Partially deleted in new
chr3	28297100	28319773	chr3:28297100-28319773	0	+	28297100	28297100	8553170	4	61,132,91,265,	0,1118,19232,22408,
#Partially deleted in new
chr3	28315002	28332407	chr3:28315002-28332407	0	-	28319242	28332407	789624	4	169,112,119,39,	0,4199,11829,17366,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	28315900	28319773	chr3:28315900-28319773	0	+	28315900	28315900	8553170	2	523,265,	0,3608,
#Partially deleted in new
chr3	28316352	28319776	chr3:28316352-28319776	0	+	28316352	28316352	8553170	3	71,107,268,	0,400,3156,
#Partially deleted in new
chr3	28321046	28349127	chr3:28321046-28349127	3	-	28324041	28340617	0	8	3408,119,59,149,100,123,221,527,	0,5785,11322,15690,16890,17446,19355,27554,
#Partially deleted in new
chr3	28322352	28348790	chr3:28322352-28348790	0	-	28322352	28322352	8553170	9	2102,119,59,149,100,123,200,85,190,	0,4479,10016,14384,15584,16140,18049,19159,26248,
#Partially deleted in new
chr3	28324186	28327002	chr3:28324186-28327002	0	-	28324186	28324186	8553170	2	268,171,	0,2645,
#Partially deleted in new
chr3	28324305	28336953	chr3:28324305-28336953	0	-	28324305	28324305	8553170	4	149,119,59,217,	0,2526,8063,12431,
#Partially deleted in new
chr3	28326489	28348972	chr3:28326489-28348972	0	-	28326489	28326489	8553170	7	461,59,149,100,123,221,372,	0,5879,10247,11447,12003,13912,22111,
#Partially deleted in new
chr3	28331688	28348629	chr3:28331688-28348629	1	-	28331898	28340617	0	7	262,59,149,100,123,221,29,	0,680,5048,6248,6804,8713,16912,
#Partially deleted in new
chr3	28331689	28337122	chr3:28331689-28337122	0	-	28331689	28331689	8553170	3	265,59,386,	0,679,5047,
#Partially deleted in new
chr3	28331690	28349050	chr3:28331690-28349050	1	-	28331869	28340617	0	7	264,59,149,100,123,221,450,	0,678,5046,6246,6802,8711,16910,
#Partially deleted in new
chr3	28331690	28332437	chr3:28331690-28332437	0	-	28331690	28331690	8553170	2	260,69,	0,678,
#Partially deleted in new
chr3	28331825	28348819	chr3:28331825-28348819	1	-	28331869	28340617	0	8	129,59,149,100,123,221,136,219,	0,543,4911,6111,6667,8576,9686,16775,
#Partially deleted in new
chr3	28332368	28348924	chr3:28332368-28348924	0	-	28332368	28340617	789624	7	59,149,100,123,221,85,324,	0,4368,5568,6124,8033,9143,16232,
#Partially deleted in new
chr3	28336827	28338617	chr3:28336827-28338617	0	-	28336827	28336827	8553170	3	58,100,125,	0,1109,1665,
#Partially deleted in new
chr3	28338545	28348477	chr3:28338545-28348477	0	-	28338545	28340617	789624	3	70,221,317,	0,1856,9615,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	28349145	28435157	chr3:28349145-28435157	0	+	28413068	28435157	789624	6	58,50,120,195,345,48,	0,2428,41352,48892,63910,85964,
#Partially deleted in new
chr3	28349148	28525145	chr3:28349148-28525145	3	+	28413068	28524688	0	10	55,120,345,160,118,47,59,68,125,619,	0,41349,63907,85961,129665,142978,164915,166405,171843,175378,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	28349177	29767537	chr3:28349177-29767537	3	+	28413068	28521001	789624	14	26,345,160,47,125,224,69,174,173,59,92,158,80,1803,	0,63878,85932,142949,171814,227095,516046,833778,1085565,1139263,1237936,1390542,1413732,1416557,
#Partially deleted in new
chr3	28413118	28461740	chr3:28413118-28461740	0	+	28413118	28461021	789624	4	282,160,118,207,	0,21991,47849,48415,
#Deleted in new
chr3	28427962	28428444	chr3:28427962-28428444	7	-	28427962	28427962	16724991	1	482,	0,
#Partially deleted in new
chr3	28447724	28448073	chr3:28447724-28448073	7	+	28447724	28447724	16724991	1	349,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	28511002	28538122	chr3:28511002-28538122	0	+	28511002	28537938	789624	6	125,59,68,125,141,241,	0,3061,4551,9989,26108,26879,
#Partially deleted in new
chr3	28574790	28758340	chr3:28574790-28758340	0	+	28574790	28574790	789624	5	585,224,211,133,991,	0,1482,181967,182318,182559,
#Partially deleted in new
chr3	28576427	28757595	chr3:28576427-28757595	0	+	28576427	28576427	8553170	3	69,133,246,	0,180681,180922,
#Partially deleted in new
chr3	28576465	30004034	chr3:28576465-30004034	0	+	28576465	30003862	789624	17	31,69,174,170,59,92,158,80,107,47,97,51,111,48,81,128,179,	0,288758,606490,858280,911975,1010648,1163254,1186444,1292392,1307696,1320913,1323239,1359620,1367741,1411677,1414616,1427390,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	28835975	29252491	chr3:28835975-29252491	0	+	28835975	28835975	8553170	5	45,124,69,174,4250,	0,388,29248,346980,412266,
#Partially deleted in new
chr3	28838947	29200717	chr3:28838947-29200717	0	+	28838947	28838947	8553170	5	169,69,114,174,666,	0,26276,136657,344008,361104,
#Partially deleted in new
chr3	29087395	29088599	chr3:29087395-29088599	7	+	29087395	29087395	16724991	1	1204,	0,
#Partially deleted in new
chr3	29264193	29290726	chr3:29264193-29290726	0	-	29264193	29264193	8553170	2	564,49,	0,26484,
#Partially deleted in new
chr3	29264193	29280904	chr3:29264193-29280904	3	-	29264193	29264193	8553170	2	564,174,	0,16537,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	29280981	30010391	chr3:29280981-30010391	1	+	29281681	30003862	789624	15	775,170,59,92,158,80,107,47,97,51,111,48,81,128,6536,	0,153764,207459,306132,458738,481928,587876,603180,616397,618723,655104,663225,707161,710100,722874,
#Partially deleted in new
chr3	29281072	29435009	chr3:29281072-29435009	0	+	29281072	29281072	8553170	3	368,206,267,	0,478,153670,
#Partially deleted in new
chr3	29281345	30004076	chr3:29281345-30004076	3	+	29281681	30003862	789624	15	411,173,59,92,158,80,107,47,97,51,111,48,81,128,221,	0,153397,207095,305768,458374,481564,587512,602816,616033,618359,654740,662861,706797,709736,722510,
#Partially deleted in new
chr3	29281372	29884228	chr3:29281372-29884228	1	+	29281681	29884212	789624	8	384,173,59,92,158,80,107,67,	0,153370,207068,305741,458347,481537,587485,602789,
#Partially deleted in new
chr3	29281451	29991318	chr3:29281451-29991318	1	+	29281681	29991213	789624	13	305,173,59,92,158,80,107,47,97,51,111,81,237,	0,153291,206989,305662,458268,481458,587406,602710,615927,618253,654634,706691,709630,
#Partially deleted in new
chr3	29281451	30005129	chr3:29281451-30005129	1	+	29281681	30003862	789624	14	305,170,59,92,158,80,107,47,97,111,48,81,128,1274,	0,153294,206989,305662,458268,481458,587406,602710,615927,654634,662755,706691,709630,722404,
#Partially deleted in new
chr3	29281551	30004013	chr3:29281551-30004013	1	+	29281681	30003862	789624	14	205,173,59,92,158,80,107,47,97,51,111,81,128,158,	0,153191,206889,305562,458168,481358,587306,602610,615827,618153,654534,706591,709530,722304,
#Partially deleted in new
chr3	29281615	29991239	chr3:29281615-29991239	1	+	29281681	29991213	789624	14	141,173,59,92,158,80,107,39,47,97,51,111,81,158,	0,153127,206825,305498,458104,481294,587242,599163,602546,615763,618089,654470,706527,709466,
#Deleted in new
chr3	29390847	29391218	chr3:29390847-29391218	7	+	29390847	29390847	16724991	1	371,	0,
#Partially deleted in new
chr3	29434856	29739922	chr3:29434856-29739922	0	+	29434856	29434856	8553170	4	59,59,92,203,	0,53584,152257,304863,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	29615974	29642809	chr3:29615974-29642809	1	-	29615974	29615974	8553170	2	505,77,	0,26758,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	29616056	29617055	chr3:29616056-29617055	0	-	29616056	29616056	8553170	2	170,695,	0,304,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	29616056	29642806	chr3:29616056-29642806	0	-	29616056	29616056	8553170	3	423,54,148,	0,25037,26602,
#Partially deleted in new
chr3	29698192	29739849	chr3:29698192-29739849	0	+	29698192	29698192	8553170	2	426,130,	0,41527,
#Partially deleted in new
chr3	29762922	29903238	chr3:29762922-29903238	0	+	29762922	29762922	8553170	6	67,107,47,97,51,114,	0,105935,121239,134456,136782,140202,
#Partially deleted in new
chr3	29797651	29797825	chr3:29797651-29797825	7	-	29797651	29797651	16724991	1	174,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	29924750	29991197	chr3:29924750-29991197	0	+	29924750	29924750	8553170	5	493,111,48,81,116,	0,11335,19456,63392,66331,
#Partially deleted in new
chr3	29926810	29934156	chr3:29926810-29934156	3	-	29926810	29926810	789624	3	36,203,315,	0,160,7031,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	29988072	29991715	chr3:29988072-29991715	0	+	29988072	29988072	8553170	2	151,634,	0,3009,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	30304319	30304536	chr3:30304319-30304536	3	-	30304319	30304319	8553170	1	217,	0,
#Partially deleted in new
chr3	30524744	30527185	chr3:30524744-30527185	3	+	30524744	30524744	8553170	2	82,354,	0,2087,
#Partially deleted in new
chr3	30524989	30526213	chr3:30524989-30526213	3	-	30524989	30524989	8553170	2	458,59,	0,1165,
#Partially deleted in new
chr3	30606501	30694134	chr3:30606501-30694134	3	+	30606883	30691599	0	7	476,169,191,800,142,128,2715,	0,38245,43768,65136,67603,81882,84918,
#Partially deleted in new
chr3	30606600	30694142	chr3:30606600-30694142	1	+	30606883	30691599	0	8	377,75,169,191,800,142,128,2723,	0,16598,38146,43669,65037,67504,81783,84819,
#Deleted in new
chr3	30626422	30626797	chr3:30626422-30626797	7	-	30626422	30626422	16724991	1	375,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	30697660	30699576	chr3:30697660-30699576	3	+	30697660	30697660	8553170	1	1916,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	30726199	30894765	chr3:30726199-30894765	3	-	30728241	30894614	789624	15	2216,90,52,200,82,65,117,55,80,116,107,91,127,173,188,	0,51979,60155,74689,107653,108017,112797,118010,118187,123796,124635,128499,130815,135393,168378,
#Partially deleted in new
chr3	30728107	30779073	chr3:30728107-30779073	0	-	30728107	30728107	8553170	3	308,90,359,	0,50071,50607,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	30797676	30894661	chr3:30797676-30894661	1	-	30800881	30894614	789624	12	3412,82,65,117,55,80,116,107,91,127,173,84,	0,36176,36540,41320,46533,46710,52319,53158,57022,59338,63916,96901,
#Deleted in new
chr3	31161703	31161787	chr3:31161703-31161787	3	-	31161703	31161703	5263520	1	84,	0,
#Deleted in new
chr3	31181750	31182650	chr3:31181750-31182650	7	-	31181750	31181750	16724991	1	900,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	31228714	31228847	chr3:31228714-31228847	7	+	31228714	31228714	16724991	1	133,	0,
#Deleted in new
chr3	31269006	31269406	chr3:31269006-31269406	7	+	31269006	31269006	16724991	1	400,	0,
#Partially deleted in new
chr3	31452831	31455894	chr3:31452831-31455894	7	+	31452831	31452831	16724991	2	2110,676,	0,2387,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	31532637	31620274	chr3:31532637-31620274	0	+	31532637	31532637	8553170	10	675,109,288,66,100,99,147,49,45,310,	0,43758,47171,64160,67722,82467,84291,85302,87148,87327,
#Partially deleted in new
chr3	31532789	31637622	chr3:31532789-31637622	3	+	31532998	31636064	789624	16	523,109,288,66,100,99,147,49,155,212,188,172,174,114,213,1639,	0,43606,47019,64008,67570,82315,84139,85150,86886,89307,90884,92124,93164,96508,100145,103194,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	31532971	31620274	chr3:31532971-31620274	0	+	31532971	31532971	8553170	10	341,109,288,66,100,99,147,49,155,310,	0,43424,46837,63826,67388,82133,83957,84968,86704,86993,
#Partially deleted in new
chr3	31533624	31617005	chr3:31533624-31617005	0	+	31533624	31533624	8553170	7	62,109,288,66,100,99,77,	0,42771,46184,63173,66735,81480,83304,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	31596805	31620296	chr3:31596805-31620296	0	+	31596805	31596805	8553170	6	58,100,99,147,49,621,	0,3554,18299,20123,21134,22870,
#Partially deleted in new
chr3	31626060	31636464	chr3:31626060-31636464	0	+	31626060	31626060	8553170	4	67,114,250,481,	0,3237,6874,9923,
#Partially deleted in new
chr3	31629250	31636045	chr3:31629250-31636045	0	+	31629250	31629250	8553170	3	161,213,62,	0,3684,6733,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	31657889	31981302	chr3:31657889-31981302	3	-	31662071	31981179	789624	12	4227,154,183,187,481,150,155,211,192,80,176,404,	0,6189,10752,12907,25744,44469,75367,90020,172150,218543,221765,323009,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	31657911	31830074	chr3:31657911-31830074	0	-	31664018	31830074	789624	8	6321,183,187,481,150,155,211,35,	0,10730,12885,25722,44447,75345,89998,172128,
#Partially deleted in new
chr3	31661671	31981300	chr3:31661671-31981300	1	-	31662071	31981179	789624	11	445,154,183,187,481,150,155,211,80,176,402,	0,2407,6970,9125,21962,40687,71585,86238,214761,217983,319227,
#Deleted in new
chr3	31662073	31664619	chr3:31662073-31664619	0	-	31662073	31662073	8553170	2	43,541,	0,2005,
#Partially deleted in new
chr3	31683867	31704758	chr3:31683867-31704758	0	-	31683867	31683867	8553170	3	247,150,141,	0,18491,20750,
#Partially deleted in new
chr3	31683968	31703800	chr3:31683968-31703800	0	-	31683968	31683968	8553170	3	146,150,185,	0,18390,19647,
#Partially deleted in new
chr3	31700298	31702471	chr3:31700298-31702471	0	-	31700298	31700298	8553170	3	168,149,113,	0,1382,2060,
#Partially deleted in new
chr3	31702375	31709164	chr3:31702375-31709164	0	-	31702375	31702375	8553170	2	133,450,	0,6339,
#Partially deleted in new
chr3	31704057	31707420	chr3:31704057-31707420	1	+	31704057	31704057	8553170	2	182,229,	0,3134,
#Deleted in new
chr3	31704105	31704970	chr3:31704105-31704970	0	+	31704105	31704105	8553170	2	134,243,	0,622,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	31704216	31721576	chr3:31704216-31721576	1	+	31704216	31704216	8553170	4	23,128,122,185,	0,6721,13932,17175,
#Partially deleted in new
chr3	31709270	31714912	chr3:31709270-31714912	1	+	31709270	31709270	8553170	3	76,206,293,	0,4603,5349,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	31710606	31721574	chr3:31710606-31721574	1	+	31710606	31710606	8553170	3	170,122,183,	0,7542,10785,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	31716990	31721577	chr3:31716990-31721577	1	+	31716990	31716990	8553170	3	177,163,186,	0,1117,4401,
#Partially deleted in new
chr3	31732586	31830180	chr3:31732586-31830180	0	-	31732586	31732586	8553170	4	571,155,211,141,	0,670,15323,97453,
#Partially deleted in new
chr3	31733256	31830105	chr3:31733256-31830105	0	-	31733256	31830105	789624	4	155,211,87,66,	0,14653,64498,96783,
#Partially deleted in new
chr3	31747932	31980946	chr3:31747932-31980946	0	-	31747932	31747932	8553170	4	188,80,176,48,	0,128500,131722,232966,
#Partially deleted in new
chr3	31747971	31906996	chr3:31747971-31906996	0	-	31747971	31747971	8553170	4	149,192,80,149,	0,82068,128461,158876,
#Partially deleted in new
chr3	31748013	31919500	chr3:31748013-31919500	0	-	31748013	31748013	8553170	5	107,192,80,176,114,	0,82026,128419,131641,171373,
#Partially deleted in new
chr3	31794469	31796175	chr3:31794469-31796175	7	+	31794469	31794469	16724991	2	664,722,	0,984,
#Partially deleted in new
chr3	31822127	31960336	chr3:31822127-31960336	0	-	31822127	31822127	8553170	5	116,192,80,176,194,	0,7912,54305,57527,138015,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	31876432	31969555	chr3:31876432-31969555	0	-	31876432	31876432	8553170	4	80,124,176,153,	0,2997,3222,92970,
#Partially deleted in new
chr3	31876434	31981305	chr3:31876434-31981305	0	-	31876434	31876434	8553170	2	78,407,	0,104464,
#Partially deleted in new
chr3	31879405	31980946	chr3:31879405-31980946	0	-	31879405	31879405	8553170	2	425,48,	0,101493,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	31981770	31988925	chr3:31981770-31988925	0	+	31981770	31981770	8553170	3	132,162,266,	0,4477,6889,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	31981773	31991628	chr3:31981773-31991628	3	+	31989079	31990978	789624	2	129,2969,	0,6886,
#Deleted in new
chr3	32030195	32030678	chr3:32030195-32030678	7	+	32030195	32030195	16724991	1	483,	0,
#Deleted in new
chr3	32037525	32037653	chr3:32037525-32037653	3	+	32037525	32037525	8553170	1	128,	0,
#Deleted in new
chr3	32045872	32045979	chr3:32045872-32045979	3	+	32045872	32045872	8553170	1	107,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	32063973	32066611	chr3:32063973-32066611	7	-	32063973	32063973	16724991	4	28,160,549,97,	0,288,920,2541,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	32105688	32140361	chr3:32105688-32140361	0	+	32128145	32140361	789624	4	141,178,141,134,	0,22387,32898,34539,
#Partially deleted in new
chr3	32106510	32168713	chr3:32106510-32168713	3	+	32106711	32165910	0	8	248,178,141,139,113,234,107,2900,	0,21565,32076,33717,40111,52365,53057,59303,
#Partially deleted in new
chr3	32106611	32159615	chr3:32106611-32159615	0	+	32106711	32140234	789624	6	147,141,139,113,234,48,	0,31975,33616,40010,52264,52956,
#Partially deleted in new
chr3	32106632	32158918	chr3:32106632-32158918	0	+	32106711	32158918	789624	5	126,178,139,113,43,	0,21443,33595,39989,52243,
#Partially deleted in new
chr3	32106698	32146665	chr3:32106698-32146665	0	+	32128145	32146665	789624	5	119,178,141,139,44,	0,21377,31888,33529,39923,
#Partially deleted in new
chr3	32151082	32151895	chr3:32151082-32151895	7	-	32151082	32151082	16724991	2	363,109,	0,704,
#Partially deleted in new
chr3	32158333	32168706	chr3:32158333-32168706	0	+	32158333	32158333	8553170	3	776,107,2893,	0,1234,7480,
#Partially deleted in new
chr3	32158756	32165888	chr3:32158756-32165888	0	+	32158756	32158756	8553170	3	353,107,75,	0,811,7057,
#Deleted in new
chr3	32190746	32191627	chr3:32190746-32191627	7	+	32190746	32190746	16724991	1	881,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	32236687	32238578	chr3:32236687-32238578	3	-	32236687	32236687	8553170	1	1891,	0,
#Partially deleted in new
chr3	32238678	32370325	chr3:32238678-32370325	3	+	32238972	32369967	789624	4	441,174,117,442,	0,118694,129193,131205,
#Partially deleted in new
chr3	32238678	32370321	chr3:32238678-32370321	1	+	32238972	32369967	789624	3	441,117,438,	0,129193,131205,
#Deleted in new
chr3	32243846	32244018	chr3:32243846-32244018	7	-	32243846	32243846	16724991	1	172,	0,
#Deleted in new
chr3	32258939	32260230	chr3:32258939-32260230	7	+	32258939	32258939	16724991	1	1291,	0,
#Partially deleted in new
chr3	32391670	32455528	chr3:32391670-32455528	3	+	32391906	32454254	789624	5	395,174,99,82,1288,	0,50169,57783,60721,62570,
#Partially deleted in new
chr3	32391697	32454830	chr3:32391697-32454830	1	+	32391906	32454254	789624	4	368,174,82,590,	0,50142,60694,62543,
#Partially deleted in new
chr3	32391888	32454358	chr3:32391888-32454358	0	+	32391906	32452089	789624	5	177,174,99,408,118,	0,49951,57565,60177,62352,
#Partially deleted in new
chr3	32392038	32454819	chr3:32392038-32454819	0	+	32392038	32454531	789624	3	27,174,579,	0,49801,62202,
#Partially deleted in new
chr3	32449514	32483067	chr3:32449514-32483067	0	+	32449514	32454254	789624	4	38,82,302,324,	0,2877,4726,33229,
#Partially deleted in new
chr3	32451002	32454835	chr3:32451002-32454835	0	+	32451002	32451002	8553170	2	1471,595,	0,3238,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	32481311	32503408	chr3:32481311-32503408	3	-	32483959	32502745	789624	4	2786,99,177,801,	0,6626,10398,21296,
#Partially deleted in new
chr3	32483738	32488381	chr3:32483738-32488381	0	-	32483738	32483738	8553170	2	359,444,	0,4199,
#Partially deleted in new
chr3	32487732	32502796	chr3:32487732-32502796	0	-	32487732	32487732	8553170	3	304,177,189,	0,3977,14875,
#Deleted in new
chr3	32507954	32508325	chr3:32507954-32508325	7	+	32507954	32507954	16724991	1	371,	0,
#Partially deleted in new
chr3	32525970	32570874	chr3:32525970-32570874	3	-	32526798	32570770	0	13	938,156,121,45,60,112,136,94,170,231,117,74,250,	0,2475,3569,4313,4490,7015,8540,11040,15066,18905,19878,44375,44654,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	32526099	32570693	chr3:32526099-32570693	0	-	32526099	32526099	8553170	11	809,156,121,2814,136,94,170,231,117,74,69,	0,2346,3440,4184,8411,10911,14937,18776,19749,44246,44525,
#Partially deleted in new
chr3	32526283	32570858	chr3:32526283-32570858	1	-	32526798	32570770	789624	11	625,156,121,45,60,112,136,94,170,74,234,	0,2162,3256,4000,4177,6702,8227,10727,14753,44062,44341,
#Partially deleted in new
chr3	32529629	32537272	chr3:32529629-32537272	0	-	32529629	32529629	8553170	6	31,45,60,112,136,262,	0,654,831,3356,4881,7381,
#Partially deleted in new
chr3	32541051	32570253	chr3:32541051-32570253	0	-	32541051	32570207	789624	4	155,231,117,113,	0,3824,4797,29089,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	32544988	32570858	chr3:32544988-32570858	0	-	32544988	32570770	789624	5	118,117,123,74,234,	0,860,21624,25357,25636,
#Partially deleted in new
chr3	32545426	32570825	chr3:32545426-32570825	0	-	32545426	32545426	8553170	3	539,74,201,	0,24919,25198,
#Partially deleted in new
chr3	32545873	32570858	chr3:32545873-32570858	0	-	32545873	32545873	8553170	2	92,513,	0,24472,
#Deleted in new
chr3	32592971	32593312	chr3:32592971-32593312	7	-	32592971	32592971	16724991	1	341,	0,
#Deleted in new
chr3	32620902	32621902	chr3:32620902-32621902	7	-	32620902	32620902	16724991	1	1000,	0,
#Deleted in new
chr3	32635221	32635554	chr3:32635221-32635554	7	-	32635221	32635221	16724991	1	333,	0,
#Partially deleted in new
chr3	32685144	32773875	chr3:32685144-32773875	3	+	32685460	32773611	789624	19	338,95,162,151,143,87,84,118,150,203,122,177,81,114,131,36,128,76,419,	0,18723,19666,23525,28082,31080,32009,34969,40305,42523,48278,49655,52265,74313,77588,79310,79537,84742,88312,
#Partially deleted in new
chr3	32685144	32773714	chr3:32685144-32773714	1	+	32685460	32773611	789624	18	338,95,162,151,143,87,84,118,150,203,122,177,114,131,36,128,76,258,	0,18723,19666,23525,28082,31080,32009,34969,40305,42523,48278,49655,74313,77588,79310,79537,84742,88312,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	32685219	32773616	chr3:32685219-32773616	0	+	32685460	32765118	789624	17	263,95,151,143,87,84,118,150,203,122,177,114,131,36,128,128,160,	0,18648,23450,28007,31005,31934,34894,40230,42448,48203,49580,74238,77513,79235,79462,79830,88237,
#Partially deleted in new
chr3	32695540	32773871	chr3:32695540-32773871	1	+	32695625	32773611	789624	19	287,95,162,151,143,87,84,118,150,203,122,177,81,114,131,36,128,76,415,	0,8327,9270,13129,17686,20684,21613,24573,29909,32127,37882,39259,41869,63917,67192,68914,69141,74346,77916,
#Partially deleted in new
chr3	32695540	32708817	chr3:32695540-32708817	0	+	32695540	32695540	8553170	4	287,95,162,148,	0,8327,9270,13129,
#Partially deleted in new
chr3	32703790	32713349	chr3:32703790-32713349	0	+	32703790	32703790	8553170	4	172,162,151,123,	0,1020,4879,9436,
#Partially deleted in new
chr3	32703862	32708775	chr3:32703862-32708775	0	+	32703862	32703862	8553170	3	35,162,106,	0,948,4807,
#Partially deleted in new
chr3	32704817	32773714	chr3:32704817-32773714	0	+	32704817	32725461	789624	16	155,151,143,87,84,150,203,122,177,81,114,131,36,128,76,258,	0,3852,8409,11407,12336,20632,22850,28605,29982,32592,54640,57915,59637,59864,65069,68639,
#Partially deleted in new
chr3	32708696	32727874	chr3:32708696-32727874	0	+	32708696	32716232	789624	6	124,87,84,118,150,207,	0,7528,8457,11417,16753,18971,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	32715995	32727808	chr3:32715995-32727808	0	+	32715995	32715995	8553170	6	139,87,84,118,150,141,	0,229,1158,4118,9454,11672,
#Partially deleted in new
chr3	32730634	32737454	chr3:32730634-32737454	3	-	32730634	32730634	8553170	2	410,56,	0,6764,
#Partially deleted in new
chr3	32734821	32769964	chr3:32734821-32769964	0	+	32734821	32769964	789624	6	155,81,114,131,128,78,	0,2588,24636,27911,29860,35065,
#Deleted in new
chr3	32752909	32753901	chr3:32752909-32753901	7	+	32752909	32752909	16724991	1	992,	0,
#Partially deleted in new
chr3	32753260	32769960	chr3:32753260-32769960	0	+	32753260	32753260	8553170	6	67,114,131,36,128,74,	0,6197,9472,11194,11421,16626,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	32764131	32769964	chr3:32764131-32769964	0	+	32764131	32764131	8553170	2	678,78,	0,5755,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	32764220	32769962	chr3:32764220-32769962	0	+	32764220	32764220	8553170	3	270,128,76,	0,461,5666,
#Deleted in new
chr3	32769022	32769964	chr3:32769022-32769964	0	+	32769022	32769022	8553170	2	452,78,	0,864,
#Partially deleted in new
chr3	32769664	32773512	chr3:32769664-32773512	0	+	32769664	32769664	8553170	2	298,56,	0,3792,
#Partially deleted in new
chr3	32785645	32786116	chr3:32785645-32786116	7	+	32785645	32785645	16724991	1	471,	0,
#Partially deleted in new
chr3	32818017	32897826	chr3:32818017-32897826	3	+	32818080	32891811	789624	4	915,168,135,7467,	0,55800,67916,72342,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	32951573	32956349	chr3:32951573-32956349	3	+	32953422	32954505	789624	2	117,2978,	0,1798,
#Partially deleted in new
chr3	32996607	33097230	chr3:32996607-33097230	3	-	32997044	33097085	789624	16	737,255,132,114,90,75,113,41,122,59,181,95,61,151,170,220,	0,17448,20101,21840,24958,27643,49512,55150,55275,56883,61481,68855,71622,72212,75936,100403,
#Partially deleted in new
chr3	32996608	33096835	chr3:32996608-33096835	1	-	32997044	33072698	789624	16	736,255,132,114,90,75,113,41,122,59,181,95,61,151,170,117,	0,17447,20100,21839,24957,27642,49511,55149,55274,56882,61480,68854,71621,72211,75935,100110,
#Partially deleted in new
chr3	32996728	33097146	chr3:32996728-33097146	1	-	32997044	33097085	789624	13	616,255,132,114,90,75,113,41,122,59,95,170,136,	0,17327,19980,21719,24837,27522,49391,55029,55154,56762,68734,75815,100282,
#Partially deleted in new
chr3	33014072	33030198	chr3:33014072-33030198	0	-	33014072	33014072	8553170	6	238,132,114,90,75,167,	0,2636,4375,7493,10178,15959,
#Partially deleted in new
chr3	33014142	33034672	chr3:33014142-33034672	0	-	33014142	33014142	8553170	6	168,132,114,90,75,320,	0,2566,4305,7423,10108,20210,
#Partially deleted in new
chr3	33016707	33038019	chr3:33016707-33038019	0	-	33016707	33016707	8553170	5	133,114,90,75,105,	0,1740,4858,7543,21207,
#Partially deleted in new
chr3	33021253	33024425	chr3:33021253-33024425	0	-	33021253	33021253	8553170	2	402,175,	0,2997,
#Partially deleted in new
chr3	33021626	33097118	chr3:33021626-33097118	0	-	33021626	33021626	8553170	7	29,75,113,41,122,59,108,	0,2624,24493,30131,30256,31864,75384,
#Partially deleted in new
chr3	33024246	33097146	chr3:33024246-33097146	0	-	33024246	33024246	8553170	6	79,113,41,122,59,136,	0,21873,27511,27636,29244,72764,
#Partially deleted in new
chr3	33030141	33034503	chr3:33030141-33034503	0	-	33030141	33030141	8553170	3	55,113,151,	0,557,4211,
#Deleted in new
chr3	33033862	33034810	chr3:33033862-33034810	7	+	33033862	33033862	16724991	1	948,	0,
#Deleted in new
chr3	33045605	33046192	chr3:33045605-33046192	0	-	33045605	33045605	8553170	2	184,73,	0,514,
#Partially deleted in new
chr3	33046143	33097142	chr3:33046143-33097142	0	-	33046143	33046143	8553170	6	89,41,122,127,59,132,	0,5614,5739,6521,7347,50867,
#Partially deleted in new
chr3	33046155	33097121	chr3:33046155-33097121	0	-	33046155	33097085	789624	6	77,41,122,59,181,111,	0,5602,5727,7335,11933,50855,
#Partially deleted in new
chr3	33051880	33072715	chr3:33051880-33072715	0	-	33058264	33072698	789624	5	124,59,181,95,172,	0,1610,6208,13582,20663,
#Partially deleted in new
chr3	33051906	33097146	chr3:33051906-33097146	0	-	33065506	33097085	789624	5	98,59,181,95,136,	0,1584,6182,13556,45104,
#Partially deleted in new
chr3	33058086	33097146	chr3:33058086-33097146	0	-	33058086	33068822	789624	5	183,95,61,151,136,	0,7376,10143,10733,38924,
#Partially deleted in new
chr3	33061667	33097043	chr3:33061667-33097043	0	-	33061667	33061667	8553170	6	47,95,61,151,170,33,	0,3795,6562,7152,10876,35343,
#Partially deleted in new
chr3	33068818	33096792	chr3:33068818-33096792	0	-	33068818	33072698	789624	4	152,170,144,74,	0,3725,8275,27900,
#Partially deleted in new
chr3	33068918	33097202	chr3:33068918-33097202	0	-	33068918	33097085	789624	4	52,170,144,192,	0,3625,8175,28092,
#Deleted in new
chr3	33077203	33077491	chr3:33077203-33077491	7	+	33077203	33077203	16724991	1	288,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	33090420	33096801	chr3:33090420-33096801	1	-	33092833	33093784	789624	2	3368,83,	0,6298,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	33090424	33096801	chr3:33090424-33096801	3	-	33092833	33094195	789624	2	3879,83,	0,6294,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	33103007	33103306	chr3:33103007-33103306	3	+	33103007	33103007	8553170	1	299,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	33113978	33147773	chr3:33113978-33147773	3	+	33114077	33142448	789624	7	570,150,172,129,146,84,5379,	0,6365,10429,15960,18576,20203,28416,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	33114053	33143158	chr3:33114053-33143158	1	+	33114077	33142448	789624	6	495,150,172,146,84,764,	0,6290,10354,18501,20128,28341,
#Partially deleted in new
chr3	33115274	33132600	chr3:33115274-33132600	0	+	33115274	33115274	8553170	5	65,150,172,129,46,	0,5069,9133,14664,17280,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	33144103	33147721	chr3:33144103-33147721	3	-	33144103	33144103	8553170	2	139,166,	0,3452,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	33150041	33219215	chr3:33150041-33219215	3	-	33152741	33218797	789624	5	3992,189,119,178,530,	0,24844,57766,63886,68644,
#Partially deleted in new
chr3	33153709	33218793	chr3:33153709-33218793	0	-	33153709	33218793	789624	4	324,119,178,108,	0,54098,60218,64976,
#Deleted in new
chr3	33190232	33190328	chr3:33190232-33190328	7	-	33190232	33190232	16724991	1	96,	0,
#Partially deleted in new
chr3	33277024	33373295	chr3:33277024-33373295	0	+	33277024	33277024	8553170	8	72,62,94,55,75,95,69,36,	0,20639,20844,81942,82258,87600,96067,96235,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	33277421	33388092	chr3:33277421-33388092	3	+	33277512	33385608	789624	15	94,62,55,75,95,69,96,127,75,131,61,45,57,213,2592,	0,20242,81545,81861,87203,95670,95838,96156,96425,97866,99851,100681,101263,106567,108079,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	33277444	33385621	chr3:33277444-33385621	0	+	33277512	33317509	789624	17	71,62,94,137,55,75,95,69,96,127,75,131,61,45,57,213,121,	0,20219,20424,40032,81522,81838,87180,95647,95815,96133,96402,97843,99828,100658,101240,106544,108056,
#Partially deleted in new
chr3	33277444	33373601	chr3:33277444-33373601	0	+	33277444	33277444	8553170	8	71,140,55,75,95,69,96,24,	0,20219,81522,81838,87180,95647,95815,96133,
#Partially deleted in new
chr3	33277444	33387265	chr3:33277444-33387265	1	+	33277512	33385608	789624	14	71,62,55,75,95,69,43,51,131,61,45,57,213,1765,	0,20219,81522,81838,87180,95647,95815,96426,97843,99828,100658,101240,106544,108056,
#Partially deleted in new
chr3	33277445	33386476	chr3:33277445-33386476	0	+	33277445	33277445	8553170	14	70,62,75,95,69,96,127,75,131,61,45,57,213,976,	0,20218,81837,87179,95646,95814,96132,96401,97842,99827,100657,101239,106543,108055,
#Partially deleted in new
chr3	33277450	33386023	chr3:33277450-33386023	0	+	33277512	33373121	789624	13	65,62,94,69,96,127,75,131,61,45,57,213,523,	0,20213,20418,95641,95809,96127,96396,97837,99822,100652,101234,106538,108050,
#Partially deleted in new
chr3	33277452	33385948	chr3:33277452-33385948	0	+	33277512	33359338	789624	16	63,62,94,55,75,95,69,96,127,75,131,61,45,150,213,448,	0,20211,20416,81514,81830,87172,95639,95807,96125,96394,97835,99820,100650,101232,106536,108048,
#Partially deleted in new
chr3	33277465	33403662	chr3:33277465-33403662	0	+	33277465	33277465	789624	13	50,62,69,96,127,75,131,61,45,57,213,228,429,	0,20198,95626,95794,96112,96381,97822,99807,100637,101219,106523,108035,125768,
#Partially deleted in new
chr3	33277471	33373319	chr3:33277471-33373319	0	+	33277512	33303157	789624	7	44,62,94,87,95,69,60,	0,20192,20397,25602,87153,95620,95788,
#Partially deleted in new
chr3	33277475	33386633	chr3:33277475-33386633	0	+	33277512	33364670	789624	13	40,62,95,69,115,127,75,131,61,45,57,213,1133,	0,20188,87149,95616,95765,96102,96371,97812,99797,100627,101209,106513,108025,
#Partially deleted in new
chr3	33277476	33385862	chr3:33277476-33385862	0	+	33277512	33373271	789624	15	39,62,55,75,95,69,115,127,75,131,61,45,57,213,362,	0,20187,81490,81806,87148,95615,95764,96101,96370,97811,99796,100626,101208,106512,108024,
#Partially deleted in new
chr3	33278172	33359358	chr3:33278172-33359358	0	+	33278172	33278172	8553170	6	221,62,94,50,55,76,	0,19491,19696,22349,80794,81110,
#Partially deleted in new
chr3	33289649	33373311	chr3:33289649-33373311	0	+	33289649	33289649	8553170	8	146,62,94,55,75,95,69,52,	0,8014,8219,69317,69633,74975,83442,83610,
#Partially deleted in new
chr3	33289668	33373303	chr3:33289668-33373303	0	+	33289668	33289668	8553170	7	127,62,55,75,95,69,44,	0,7995,69298,69614,74956,83423,83591,
#Partially deleted in new
chr3	33364335	33373618	chr3:33364335-33373618	0	+	33364335	33364335	8553170	4	384,69,115,41,	0,8756,8905,9242,
#Partially deleted in new
chr3	33372340	33373639	chr3:33372340-33373639	0	+	33372340	33372340	8553170	4	335,69,96,62,	0,751,919,1237,
#Deleted in new
chr3	33372987	33375366	chr3:33372987-33375366	0	+	33372987	33372987	8553170	5	173,96,127,75,79,	0,272,590,859,2300,
#Deleted in new
chr3	33373020	33375407	chr3:33373020-33375407	0	+	33373020	33373020	8553170	5	140,96,127,71,120,	0,239,557,830,2267,
#Deleted in new
chr3	33373275	33373924	chr3:33373275-33373924	0	+	33373275	33373275	8553170	2	429,78,	0,571,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	33382551	33386625	chr3:33382551-33386625	0	+	33382551	33382551	8553170	2	1650,1125,	0,2949,
#Partially deleted in new
chr3	33388335	33440378	chr3:33388335-33440378	3	-	33390330	33439848	789624	16	2033,52,143,119,91,94,55,104,108,111,153,107,106,77,152,643,	0,4227,4976,7826,8709,11853,12626,14465,20354,20900,21113,23245,24386,28422,37254,51400,
#Partially deleted in new
chr3	33388337	33398438	chr3:33388337-33398438	0	-	33388337	33388337	8553170	2	5117,2277,	0,7824,
#Partially deleted in new
chr3	33388338	33440010	chr3:33388338-33440010	1	-	33390330	33439848	789624	15	2030,52,143,119,91,94,55,104,111,153,107,106,77,152,275,	0,4224,4973,7823,8706,11850,12623,14462,20897,21110,23242,24383,28419,37251,51397,
#Partially deleted in new
chr3	33390096	33396621	chr3:33390096-33396621	0	-	33390096	33390096	8553170	4	272,52,143,460,	0,2466,3215,6065,
#Partially deleted in new
chr3	33390133	33440510	chr3:33390133-33440510	1	-	33390330	33439848	789624	17	235,52,143,119,91,94,55,104,108,111,153,107,106,77,152,190,177,	0,2429,3178,6028,6911,10055,10828,12667,18556,19102,19315,21447,22588,26624,35456,49602,50200,
#Partially deleted in new
chr3	33390265	33408722	chr3:33390265-33408722	0	-	33390265	33390265	8553170	10	103,52,143,119,134,91,94,55,104,33,	0,2297,3046,5896,6479,6779,9923,10696,12535,18424,
#Partially deleted in new
chr3	33392362	33396302	chr3:33392362-33396302	0	-	33392362	33392362	8553170	3	252,143,141,	0,949,3799,
#Partially deleted in new
chr3	33396242	33411659	chr3:33396242-33411659	0	-	33396796	33409304	789624	9	38,134,91,94,55,104,111,153,79,	0,502,802,3946,4719,6558,12993,13206,15338,
#Partially deleted in new
chr3	33396581	33400267	chr3:33396581-33400267	0	-	33396581	33396581	8553170	2	554,79,	0,3607,
#Partially deleted in new
chr3	33400961	33412756	chr3:33400961-33412756	0	-	33400961	33400961	8553170	7	55,104,108,111,139,107,35,	0,1839,7728,8274,8487,10619,11760,
#Partially deleted in new
chr3	33409284	33416820	chr3:33409284-33416820	0	-	33409284	33409284	8553170	6	62,153,107,106,95,63,	0,164,2296,3437,6721,7473,
#Partially deleted in new
chr3	33412725	33440587	chr3:33412725-33440587	0	-	33412725	33439848	789624	5	102,77,152,121,129,	0,4032,12864,27010,27733,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	33414149	33414211	chr3:33414149-33414211	3	+	33414149	33414149	8553170	1	62,	0,
#Partially deleted in new
chr3	33416792	33441371	chr3:33416792-33441371	0	-	33416792	33416792	8553170	4	42,152,247,103,	0,8797,23884,24476,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	33491982	33492098	chr3:33491982-33492098	7	-	33491982	33491982	16724991	1	116,	0,
#Partially deleted in new
chr3	33496244	33718356	chr3:33496244-33718356	1	-	33498630	33718002	789624	39	2473,117,207,129,194,229,154,107,144,144,79,164,64,245,24,107,108,171,102,18,24,174,56,168,78,60,71,136,146,93,80,147,71,98,76,92,104,79,549,	0,5407,14313,19778,20736,38988,42544,47188,48453,55007,63062,64563,74482,76865,78228,79924,85576,88505,96150,98706,100466,106707,107909,110346,111139,112322,115756,123358,125890,130743,136047,148512,167200,188114,190815,192032,193584,200610,221563,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	33496244	33505451	chr3:33496244-33505451	0	-	33496244	33496244	8553170	2	2473,3800,	0,5407,
#Partially deleted in new
chr3	33496244	33718049	chr3:33496244-33718049	1	-	33498630	33718002	789624	39	2473,117,207,129,194,229,154,107,144,144,79,164,64,245,24,107,108,171,102,18,24,174,56,168,78,60,71,136,146,93,83,147,71,98,76,92,104,79,242,	0,5407,14313,19778,20736,38988,42544,47188,48453,55007,63062,64563,74482,76865,78228,79924,85576,88505,96150,98706,100466,106707,107909,110346,111139,112322,115756,123358,125890,130743,136047,148512,167200,188114,190815,192032,193584,200610,221563,
#Partially deleted in new
chr3	33496248	33718213	chr3:33496248-33718213	3	-	33498630	33718002	789624	40	2469,117,207,129,194,229,154,107,144,144,79,164,3,64,245,24,107,108,171,102,18,24,174,56,168,78,60,71,136,146,93,83,147,71,98,76,92,104,79,406,	0,5403,14309,19774,20732,38984,42540,47184,48449,55003,63058,64559,67715,74478,76861,78224,79920,85572,88501,96146,98702,100462,106703,107905,110342,111135,112318,115752,123354,125886,130739,136043,148508,167196,188110,190811,192028,193580,200606,221559,
#Partially deleted in new
chr3	33496992	33659441	chr3:33496992-33659441	1	-	33498630	33658989	789624	33	1725,117,207,129,194,229,154,107,144,144,79,164,64,245,107,63,108,171,102,18,24,174,56,168,78,60,71,136,146,93,80,147,468,	0,4659,13565,19030,19988,38240,41796,46440,47705,54259,62314,63815,73734,76117,79176,80209,84828,87757,95402,97958,99718,105959,107161,109598,110391,111574,115008,122610,125142,129995,135299,147764,161981,
#Partially deleted in new
chr3	33497754	33659105	chr3:33497754-33659105	1	-	33498630	33658989	789624	33	963,117,207,129,194,229,154,107,144,144,79,164,3,64,245,107,108,171,102,18,24,174,56,168,78,60,71,136,146,93,80,147,132,	0,3897,12803,18268,19226,37478,41034,45678,46943,53497,61552,63053,66209,72972,75355,78414,84066,86995,94640,97196,98956,105197,106399,108836,109629,110812,114246,121848,124380,129233,134537,147002,161219,
#Partially deleted in new
chr3	33498466	33535366	chr3:33498466-33535366	0	-	33498630	33535366	789624	5	251,117,129,194,134,	0,3185,17556,18514,36766,
#Partially deleted in new
chr3	33498512	33645458	chr3:33498512-33645458	1	-	33498630	33645315	789624	35	205,117,207,129,194,229,154,107,144,144,79,164,64,245,24,107,108,171,27,27,102,18,24,174,56,168,78,60,71,136,146,93,80,147,177,	0,3139,12045,17510,18468,36720,40276,44920,46185,52739,60794,62295,72214,74597,75960,77656,83308,86237,90192,93700,93882,96438,98198,104439,105641,108078,108871,110054,113488,121090,123622,128475,133779,146244,146769,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	33498583	33535448	chr3:33498583-33535448	0	-	33514664	33535448	789624	7	134,117,207,100,129,194,216,	0,3068,11974,15996,17439,18397,36649,
#Partially deleted in new
chr3	33535372	33545111	chr3:33535372-33545111	0	-	33535372	33535372	8553170	4	89,154,107,414,	0,3416,8060,9325,
#Partially deleted in new
chr3	33538922	33560876	chr3:33538922-33560876	0	-	33538922	33560876	789624	7	20,107,144,144,51,79,69,	0,4510,5775,12329,20202,20384,21885,
#Deleted in new
chr3	33554635	33554859	chr3:33554635-33554859	7	+	33554635	33554635	16724991	1	224,	0,
#Deleted in new
chr3	33558335	33559341	chr3:33558335-33559341	0	-	33558335	33558335	8553170	2	840,35,	0,971,
#Partially deleted in new
chr3	33570730	33576421	chr3:33570730-33576421	0	-	33570730	33570730	8553170	3	60,245,253,	0,2379,5438,
#Partially deleted in new
chr3	33573169	33584798	chr3:33573169-33584798	0	-	33573169	33584798	789624	6	185,24,107,63,108,49,	0,1303,2999,4032,8651,11580,
#Partially deleted in new
chr3	33602412	33645492	chr3:33602412-33645492	1	-	33602536	33645315	789624	13	177,174,56,168,78,60,71,136,146,93,80,147,211,	0,539,1741,4178,4971,6154,9588,17190,19722,24575,29879,42344,42869,
#Partially deleted in new
chr3	33602442	33645503	chr3:33602442-33645503	1	-	33602829	33645315	789624	12	683,56,168,78,60,71,136,146,93,80,147,222,	0,1711,4148,4941,6124,9558,17160,19692,24545,29849,42314,42839,
#Partially deleted in new
chr3	33602443	33645274	chr3:33602443-33645274	1	-	33602829	33645048	789624	12	682,56,168,78,60,71,136,146,93,80,147,272,	0,1710,4147,4940,6123,9557,17159,19691,24544,29848,42313,42559,
#Partially deleted in new
chr3	33612008	33645490	chr3:33612008-33645490	0	-	33612008	33645315	789624	7	63,136,146,93,80,147,209,	0,7594,10126,14979,20283,32748,33273,
#Partially deleted in new
chr3	33619689	33659140	chr3:33619689-33659140	0	-	33619689	33658989	789624	6	49,146,93,83,147,167,	0,2445,7298,12602,25067,39284,
#Partially deleted in new
chr3	33622152	33645469	chr3:33622152-33645469	0	-	33622152	33622152	8553170	5	128,93,80,147,126,	0,4835,10139,22604,23191,
#Partially deleted in new
chr3	33622186	33659672	chr3:33622186-33659672	0	-	33622186	33622186	8553170	5	94,93,80,147,166,	0,4801,10105,22570,37320,
#Partially deleted in new
chr3	33626987	33659602	chr3:33626987-33659602	0	-	33626987	33626987	8553170	5	93,80,147,36,96,	0,5304,17769,31986,32519,
#Partially deleted in new
chr3	33644381	33659107	chr3:33644381-33659107	0	-	33644381	33644381	8553170	2	522,134,	0,14592,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	33682978	33688368	chr3:33682978-33688368	0	-	33682978	33682978	8553170	4	626,98,76,92,	0,1380,4081,5298,
#Partially deleted in new
chr3	33689729	33718010	chr3:33689729-33718010	0	-	33689729	33689729	8553170	3	203,79,203,	0,7125,28078,
#Partially deleted in new
chr3	33727249	33727604	chr3:33727249-33727604	7	-	33727249	33727249	16724991	1	355,	0,
#Deleted in new
chr3	33771962	33772295	chr3:33771962-33772295	7	+	33771962	33771962	16724991	1	333,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	33793643	33798539	chr3:33793643-33798539	3	-	33793643	33793643	8553170	2	4379,145,	0,4751,
#Partially deleted in new
chr3	33798351	33869702	chr3:33798351-33869702	3	+	33798728	33866525	0	18	586,55,70,128,154,101,117,223,124,178,112,170,249,135,95,124,188,3352,	0,13720,15207,23603,26835,28128,30501,37692,39852,43545,45760,47067,54136,55527,56814,65654,66891,67999,
#Partially deleted in new
chr3	33798570	33869707	chr3:33798570-33869707	1	+	33798728	33866525	0	18	367,55,70,128,154,101,132,223,124,178,112,170,249,135,95,124,188,3357,	0,13501,14988,23384,26616,27909,30267,37473,39633,43326,45541,46848,53917,55308,56595,65435,66672,67780,
#Partially deleted in new
chr3	33798574	33869680	chr3:33798574-33869680	0	+	33798728	33828905	8553170	19	363,55,70,128,154,101,118,132,223,124,178,112,170,249,135,95,124,188,3330,	0,13497,14984,23380,26612,27905,29047,30263,37469,39629,43322,45537,46844,53913,55304,56591,65431,66668,67776,
#Partially deleted in new
chr3	33798610	33825248	chr3:33798610-33825248	0	+	33798728	33813568	789624	4	327,70,128,62,	0,14948,23344,26576,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	33798620	33821999	chr3:33798620-33821999	0	+	33798728	33811124	789624	5	317,95,55,70,45,	0,12476,13451,14938,23334,
#Partially deleted in new
chr3	33798622	33825334	chr3:33798622-33825334	0	+	33798728	33825334	789624	4	315,55,48,148,	0,13449,23412,26564,
#Partially deleted in new
chr3	33798629	33825340	chr3:33798629-33825340	0	+	33798629	33798629	8553170	4	308,55,70,154,	0,13442,14929,26557,
#Partially deleted in new
chr3	33798939	33822032	chr3:33798939-33822032	0	+	33798939	33798939	8553170	4	599,55,70,78,	0,13132,14619,23015,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	33811062	33826539	chr3:33811062-33826539	0	+	33811062	33811062	8553170	6	129,55,70,128,154,60,	0,1009,2496,10892,14124,15417,
#Partially deleted in new
chr3	33813276	33825325	chr3:33813276-33825325	0	+	33813276	33813276	8553170	3	352,128,139,	0,8678,11910,
#Partially deleted in new
chr3	33821972	33826877	chr3:33821972-33826877	0	+	33821972	33821972	8553170	3	110,154,398,	0,3214,4507,
#Partially deleted in new
chr3	33825240	33844223	chr3:33825240-33844223	0	+	33825294	33835277	789624	7	100,101,117,65,223,124,112,	0,1239,3612,10013,10803,12963,18871,
#Partially deleted in new
chr3	33827579	33836172	chr3:33827579-33836172	0	+	33827579	33827579	8553170	3	380,117,129,	0,1273,8464,
#Partially deleted in new
chr3	33828480	33838241	chr3:33828480-33838241	0	+	33828480	33828480	8553170	3	489,223,38,	0,7563,9723,
#Partially deleted in new
chr3	33844090	33864117	chr3:33844090-33864117	0	+	33844090	33844090	8553170	6	133,170,249,135,95,112,	0,1328,8397,9788,11075,19915,
#Partially deleted in new
chr3	33852607	33855329	chr3:33852607-33855329	0	+	33852607	33852607	8553170	3	129,135,164,	0,1271,2558,
#Partially deleted in new
chr3	33854617	33865317	chr3:33854617-33865317	0	+	33854617	33854617	8553170	3	643,124,75,	0,9388,10625,
#Deleted in new
chr3	33863895	33866468	chr3:33863895-33866468	0	+	33863895	33863895	8553170	3	234,188,118,	0,1347,2455,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	34159333	34562877	chr3:34159333-34562877	3	+	34159333	34159333	8553170	8	83,76,67,68,187,89,115,102,	0,11511,139519,186888,227557,249927,397254,403442,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	34159381	34361061	chr3:34159381-34361061	1	+	34159381	34159381	8553170	6	35,76,67,68,91,257,	0,11463,139471,186840,200889,201423,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	34203243	34268811	chr3:34203243-34268811	3	+	34203243	34203243	8553170	2	65,490,	0,65078,
#Partially deleted in new
chr3	34524817	34543880	chr3:34524817-34543880	3	-	34524817	34524817	8553170	3	244,130,200,	0,11128,18863,
#Deleted in new
chr3	34872640	34873854	chr3:34872640-34873854	7	+	34872640	34872640	16724991	1	1214,	0,
#Deleted in new
chr3	35215704	35217149	chr3:35215704-35217149	7	-	35215704	35215704	16724991	1	1445,	0,
#Deleted in new
chr3	35256839	35256946	chr3:35256839-35256946	3	-	35256839	35256839	8553170	1	107,	0,
#Partially deleted in new
chr3	35638944	35687789	chr3:35638944-35687789	0	+	35681751	35687789	789624	6	87,174,167,42,90,51,	0,40842,42769,43903,44781,48794,
#Partially deleted in new
chr3	35639588	35685887	chr3:35639588-35685887	1	+	35681751	35684029	789624	6	810,174,167,42,90,1867,	0,40198,42125,43259,44137,44432,
#Partially deleted in new
chr3	35640254	35681847	chr3:35640254-35681847	0	+	35681751	35681847	789624	4	144,174,92,134,	0,39532,40571,41459,
#Partially deleted in new
chr3	35640963	35794457	chr3:35640963-35794457	1	+	35681751	35793958	789624	19	89,174,167,42,90,145,79,60,141,109,38,230,234,185,105,261,127,149,757,	0,38823,40750,41884,42762,46775,48343,49117,49901,66010,74475,80641,88339,96214,97250,98353,102875,151418,152737,
#Partially deleted in new
chr3	35641420	35682880	chr3:35641420-35682880	0	+	35681751	35682880	789624	4	283,174,167,33,	0,38366,40293,41427,
#Partially deleted in new
chr3	35642164	35794496	chr3:35642164-35794496	3	+	35681751	35793958	789624	20	244,174,167,42,90,145,79,60,141,109,102,38,60,230,234,185,261,127,149,796,	0,37622,39549,40683,41561,45574,47142,47916,48700,64809,66804,73274,75133,79440,87138,95013,97152,101674,150217,151536,
#Partially deleted in new
chr3	35642289	35683843	chr3:35642289-35683843	0	+	35681751	35683843	789624	5	119,174,167,42,118,	0,37497,39424,40558,41436,
#Partially deleted in new
chr3	35642336	35687760	chr3:35642336-35687760	0	+	35681751	35687760	789624	6	95,174,167,42,90,22,	0,37450,39377,40511,41389,45402,
#Partially deleted in new
chr3	35642339	35690898	chr3:35642339-35690898	0	+	35681751	35689342	789624	8	69,174,167,42,90,79,60,34,	0,37447,39374,40508,41386,46967,47741,48525,
#Partially deleted in new
chr3	35643620	35681880	chr3:35643620-35681880	0	+	35681751	35681880	789624	3	202,174,167,	0,36166,38093,
#Deleted in new
chr3	35650196	35651961	chr3:35650196-35651961	3	-	35650196	35650196	8553170	2	288,254,	0,1511,
#Deleted in new
chr3	35678818	35684089	chr3:35678818-35684089	1	+	35681751	35684029	789624	6	26,174,167,42,90,69,	0,968,2895,4029,4907,5202,
#Deleted in new
chr3	35679619	35684046	chr3:35679619-35684046	1	+	35681751	35684029	789624	6	73,174,167,42,90,26,	0,167,2094,3228,4106,4401,
#Deleted in new
chr3	35679620	35685887	chr3:35679620-35685887	1	+	35681751	35684029	789624	5	340,167,42,90,1867,	0,2093,3227,4105,4400,
#Deleted in new
chr3	35679623	35685885	chr3:35679623-35685885	1	+	35681751	35684029	789624	6	78,174,167,42,90,1865,	0,163,2090,3224,4102,4397,
#Deleted in new
chr3	35679626	35684395	chr3:35679626-35684395	1	+	35681751	35684029	789624	7	75,174,92,167,42,90,375,	0,160,1199,2087,3221,4099,4394,
#Deleted in new
chr3	35679643	35683858	chr3:35679643-35683858	0	+	35681751	35683858	789624	5	58,174,167,42,133,	0,143,2070,3204,4082,
#Deleted in new
chr3	35679744	35687773	chr3:35679744-35687773	0	+	35681751	35687773	789624	5	216,167,42,90,35,	0,1969,3103,3981,7994,
#Partially deleted in new
chr3	35679784	35794388	chr3:35679784-35794388	1	+	35681751	35793958	789624	19	176,167,42,90,145,79,60,141,109,38,60,230,234,185,105,261,127,149,688,	0,1929,3063,3941,7954,9522,10296,11080,27189,35654,37513,41820,49518,57393,58429,59532,64054,112597,113916,
#Deleted in new
chr3	35680936	35684791	chr3:35680936-35684791	1	+	35681751	35684029	789624	5	234,167,42,90,771,	0,777,1911,2789,3084,
#Deleted in new
chr3	35680960	35685887	chr3:35680960-35685887	0	+	35680960	35680960	8553170	3	920,42,2162,	0,1887,2765,
#Deleted in new
chr3	35680999	35685887	chr3:35680999-35685887	1	+	35681751	35684029	789624	4	881,42,90,1867,	0,1848,2726,3021,
#Deleted in new
chr3	35681351	35684141	chr3:35681351-35684141	1	+	35681751	35684029	789624	5	141,167,42,90,121,	0,362,1496,2374,2669,
#Deleted in new
chr3	35681496	35684758	chr3:35681496-35684758	1	+	35681751	35684029	789624	5	66,167,42,90,738,	0,217,1351,2229,2524,
#Deleted in new
chr3	35682429	35684410	chr3:35682429-35684410	0	+	35682429	35682429	8553170	4	55,42,90,390,	0,418,1296,1591,
#Partially deleted in new
chr3	35689313	35721631	chr3:35689313-35721631	0	+	35689313	35707504	789624	9	72,60,141,109,91,102,38,60,27,	0,767,1551,17660,18137,19655,26125,27984,32291,
#Partially deleted in new
chr3	35690071	35729541	chr3:35690071-35729541	0	+	35690071	35729541	789624	6	69,141,38,64,230,239,	0,793,25367,27226,31533,39231,
#Partially deleted in new
chr3	35690074	35737252	chr3:35690074-35737252	0	+	35690074	35721732	789624	6	66,141,38,233,234,75,	0,790,25364,31530,39228,47103,
#Partially deleted in new
chr3	35690924	35729526	chr3:35690924-35729526	0	+	35690924	35690924	8553170	2	81,224,	0,38378,
#Partially deleted in new
chr3	35706973	35715795	chr3:35706973-35715795	0	+	35706973	35706973	8553170	2	109,357,	0,8465,
#Partially deleted in new
chr3	35714963	35729336	chr3:35714963-35729336	0	+	35714963	35714963	8553170	4	513,60,230,34,	0,2334,6641,14339,
#Partially deleted in new
chr3	35721635	35794459	chr3:35721635-35794459	0	+	35721635	35739324	789624	8	199,234,180,105,261,127,149,759,	0,7667,15547,16578,17681,22203,70746,72065,
#Partially deleted in new
chr3	35738231	35785232	chr3:35738231-35785232	0	+	35738231	35738231	8553170	4	87,57,127,376,	0,1289,5607,46625,
#Deleted in new
chr3	35744475	35744559	chr3:35744475-35744559	3	+	35744475	35744475	5263520	1	84,	0,
#Partially deleted in new
chr3	35774791	35793745	chr3:35774791-35793745	0	+	35774791	35774791	8553170	3	226,149,45,	0,17590,18909,
#Partially deleted in new
chr3	35781451	35793800	chr3:35781451-35793800	0	+	35781451	35781451	8553170	3	158,149,100,	0,10930,12249,
#Deleted in new
chr3	35792176	35794450	chr3:35792176-35794450	0	+	35792176	35792176	8553170	2	354,750,	0,1524,
#Deleted in new
chr3	35871865	35872198	chr3:35871865-35872198	7	+	35871865	35871865	16724991	1	333,	0,
#Deleted in new
chr3	36169766	36170448	chr3:36169766-36170448	7	-	36169766	36169766	16724991	1	682,	0,
#Partially deleted in new
chr3	36380343	36548007	chr3:36380343-36548007	3	+	36380643	36546289	0	11	411,277,101,82,116,79,65,89,52,138,1817,	0,63020,102648,104633,105790,112807,124049,125402,148352,148504,165847,
#Partially deleted in new
chr3	36380502	36546488	chr3:36380502-36546488	1	+	36380643	36546289	789624	9	252,277,116,79,65,89,52,138,298,	0,62861,105631,112648,123890,125243,148193,148345,165688,
#Partially deleted in new
chr3	36380527	36493229	chr3:36380527-36493229	0	+	36380643	36483036	789624	5	227,101,82,116,79,	0,102464,104449,105606,112623,
#Partially deleted in new
chr3	36380572	36528747	chr3:36380572-36528747	0	+	36380643	36528747	789624	7	182,244,116,79,65,89,52,	0,62824,105561,112578,123820,125173,148123,
#Partially deleted in new
chr3	36380668	36505786	chr3:36380668-36505786	0	+	36380668	36380668	8553170	10	86,220,277,101,82,163,116,79,65,41,	0,28833,62695,102323,104308,105094,105465,112482,123724,125077,
#Partially deleted in new
chr3	36380684	36459341	chr3:36380684-36459341	0	+	36380684	36380684	8553170	3	70,277,129,	0,62679,78528,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	36486170	36506237	chr3:36486170-36506237	0	+	36486170	36486170	8553170	4	79,79,65,492,	0,6980,18222,19575,
#Deleted in new
chr3	36528708	36529239	chr3:36528708-36529239	0	+	36528708	36528708	8553170	2	39,392,	0,139,
#Partially deleted in new
chr3	36616005	36637457	chr3:36616005-36637457	7	-	36616005	36616005	16724991	9	207,217,181,55,208,76,228,141,138,	0,2141,10580,12425,13529,14573,15685,17511,21314,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	36712421	36739861	chr3:36712421-36739861	3	-	36715327	36738659	789624	5	3100,168,133,1877,66,	0,5588,9105,24786,27374,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	36712421	36764349	chr3:36712421-36764349	1	-	36715327	36764263	789624	5	3100,168,133,1877,168,	0,5588,9105,24786,51760,
#Partially deleted in new
chr3	36718092	36729795	chr3:36718092-36729795	0	-	36718092	36718092	8553170	3	85,133,62,	0,3434,11641,
#Deleted in new
chr3	36767116	36768799	chr3:36767116-36768799	5	-	36767116	36767116	16724991	1	1683,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	36768724	36784167	chr3:36768724-36784167	7	-	36768724	36768724	16724991	2	536,35,	0,15408,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	36819275	36821433	chr3:36819275-36821433	3	-	36819275	36819275	8553170	2	357,135,	0,2023,
#Deleted in new
chr3	36820549	36822498	chr3:36820549-36822498	1	-	36820549	36820549	789624	2	868,103,	0,1846,
#Deleted in new
chr3	36823150	36825158	chr3:36823150-36825158	3	-	36823150	36823150	8553170	1	2008,	0,
#Partially deleted in new
chr3	36826819	36945057	chr3:36826819-36945057	1	-	36828274	36944809	789624	23	1556,99,3047,146,133,104,89,157,147,138,200,2877,177,255,162,171,132,139,84,119,151,127,271,	0,2744,4053,7942,11552,11793,15802,19428,20380,24899,25326,28353,31898,34086,37499,47306,63009,65382,66081,68820,72289,76329,117967,
#Partially deleted in new
chr3	36826825	36945098	chr3:36826825-36945098	3	-	36828274	36944809	789624	24	1550,99,3047,146,133,104,89,157,147,138,200,2877,177,255,162,171,132,139,84,119,151,127,132,312,	0,2738,4047,7936,11546,11787,15796,19422,20374,24893,25320,28347,31892,34080,37493,47300,63003,65376,66075,68814,72283,76323,81497,117961,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr3	36826825	36944861	chr3:36826825-36944861	0	-	36851390	36908453	789624	26	1550,99,3047,146,133,104,89,157,147,1264,138,200,2877,177,255,162,171,132,139,84,119,151,127,132,101,75,	0,2738,4047,7936,11546,11787,15796,19422,20374,23328,24893,25320,28347,31892,34080,37493,47300,63003,65376,66075,68814,72283,76323,81497,102489,117961,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	36826831	36857632	chr3:36826831-36857632	0	-	36851390	36857632	789624	14	1544,99,3047,89,146,133,104,89,157,147,1264,138,200,2460,	0,2732,4041,7555,7930,11540,11781,15790,19416,20368,23322,24887,25314,28341,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	36826831	36856645	chr3:36826831-36856645	0	-	36851390	36856645	789624	12	1544,99,3047,146,104,89,157,147,1264,138,200,1473,	0,2732,4041,7930,11781,15790,19416,20368,23322,24887,25314,28341,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	36842679	36850651	chr3:36842679-36850651	0	-	36842679	36842679	8553170	4	31,157,147,498,	0,3568,4520,7474,
#Deleted in new
chr3	36880183	36880729	chr3:36880183-36880729	7	-	36880183	36880183	16724991	1	546,	0,
#Partially deleted in new
chr3	36899106	36908518	chr3:36899106-36908518	0	-	36899106	36908453	789624	3	153,127,196,	0,4042,9216,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	36968190	36968316	chr3:36968190-36968316	3	-	36968190	36968190	8553170	1	126,	0,
#Deleted in new
chr3	36973116	36973672	chr3:36973116-36973672	3	-	36973116	36973116	8553170	1	556,	0,
#Deleted in new
chr3	36976315	36976840	chr3:36976315-36976840	7	+	36976315	36976315	16724991	1	525,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	36985042	36993168	chr3:36985042-36993168	3	-	36991253	36993077	789624	1	8126,	0,
#Deleted in new
chr3	36986809	36992940	chr3:36986809-36992940	0	-	36987225	36992940	789624	3	420,60,63,	0,3566,6068,
#Deleted in new
chr3	36990310	36992268	chr3:36990310-36992268	0	-	36990405	36992268	789624	2	125,388,	0,1570,
#Partially deleted in new
chr3	36993331	37050918	chr3:36993331-37050918	3	+	36993547	37050653	0	19	332,91,99,74,73,92,43,89,113,94,154,371,149,109,64,165,93,114,433,	0,3287,7623,11069,13659,15482,18488,18679,21100,24174,26978,32305,35452,46854,48936,54187,55185,55572,57154,
#Partially deleted in new
chr3	36993349	37050842	chr3:36993349-37050842	1	+	37014477	37050653	0	18	314,99,74,73,92,43,89,113,94,154,371,149,109,64,165,93,114,357,	0,7605,11051,13641,15464,18470,18661,21082,24156,26960,32287,35434,46836,48918,54169,55167,55554,57136,
#Partially deleted in new
chr3	36993515	37014494	chr3:36993515-37014494	0	+	36993547	36996624	789624	8	148,86,74,73,92,43,89,63,	0,3108,10885,13475,15298,18304,18495,20916,
#Partially deleted in new
chr3	36993523	37012099	chr3:36993523-37012099	0	+	36993547	36993694	789624	8	367,91,99,74,73,92,43,89,	0,3095,7431,10877,13467,15290,18296,18487,
#Partially deleted in new
chr3	36993532	37012056	chr3:36993532-37012056	0	+	36993547	37000955	789624	7	131,99,74,73,92,43,46,	0,7422,10868,13458,15281,18287,18478,
#Partially deleted in new
chr3	36993533	37011840	chr3:36993533-37011840	0	+	36993547	36996624	789624	7	130,86,94,74,73,92,21,	0,3090,7421,10867,13457,15280,18286,
#Partially deleted in new
chr3	36993572	37050844	chr3:36993572-37050844	0	+	36993572	37050653	789624	17	91,91,99,74,73,92,43,89,113,94,154,371,149,109,64,165,359,	0,3046,7382,10828,13418,15241,18247,18438,20859,23933,26737,32064,35211,46613,48695,53946,56913,
#Partially deleted in new
chr3	36993775	37050846	chr3:36993775-37050846	1	+	37014477	37050653	0	20	115,91,145,99,74,73,92,43,89,113,94,154,371,149,109,64,165,93,114,361,	0,2843,3380,7179,10625,13215,15038,18044,18235,20656,23730,26534,31861,35008,46410,48492,53743,54741,55128,56710,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	36993776	37001054	chr3:36993776-37001054	0	+	36993776	36993776	8553170	4	114,124,91,100,	0,1053,2842,7178,
#Partially deleted in new
chr3	36993776	37050842	chr3:36993776-37050842	1	+	37014477	37050653	0	18	114,91,99,74,73,43,89,113,94,154,371,149,109,64,165,93,114,357,	0,2842,7178,10624,13214,18043,18234,20655,23729,26533,31860,35007,46409,48491,53742,54740,55127,56709,
#Partially deleted in new
chr3	36993797	37050706	chr3:36993797-37050706	1	+	37014477	37050653	0	19	93,86,99,74,73,92,43,89,113,94,154,371,149,109,64,165,93,114,221,	0,2826,7157,10603,13193,15016,18022,18213,20634,23708,26512,31839,34986,46388,48470,53721,54719,55106,56688,
#Partially deleted in new
chr3	36993803	37050844	chr3:36993803-37050844	1	+	37001036	37050653	0	19	87,91,94,74,73,92,43,89,113,94,154,371,149,109,64,165,93,114,359,	0,2815,7151,10597,13187,15010,18016,18207,20628,23702,26506,31833,34980,46382,48464,53715,54713,55100,56682,
#Partially deleted in new
chr3	36993803	37020463	chr3:36993803-37020463	0	+	37014477	37020463	789624	10	87,91,99,74,73,43,89,113,94,154,	0,2815,7151,10597,13187,18016,18207,20628,23702,26506,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	36993825	37008904	chr3:36993825-37008904	0	+	37001036	37008904	789624	7	65,74,91,94,74,73,91,	0,1004,2793,7129,10575,13165,14988,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	36993825	37011840	chr3:36993825-37011840	0	+	36993825	36993825	8553170	8	65,74,91,99,74,73,92,21,	0,1004,2793,7129,10575,13165,14988,17994,
#Partially deleted in new
chr3	36993847	37008882	chr3:36993847-37008882	0	+	36993847	36993847	8553170	7	43,91,99,74,106,73,69,	0,2771,7107,10553,12013,13143,14966,
#Partially deleted in new
chr3	36994226	37011836	chr3:36994226-37011836	0	+	36994226	36994226	8553170	7	120,91,99,74,73,92,17,	0,2392,6728,10174,12764,14587,17593,
#Partially deleted in new
chr3	37012041	37025919	chr3:37012041-37025919	0	+	37012041	37020314	789624	4	58,113,154,283,	0,2390,8268,13595,
#Partially deleted in new
chr3	37012081	37028847	chr3:37012081-37028847	0	+	37012081	37025697	789624	5	18,113,94,371,64,	0,2350,5424,13555,16702,
#Partially deleted in new
chr3	37014431	37040236	chr3:37014431-37040236	0	+	37014431	37025680	789624	4	113,371,149,51,	0,11205,14352,25754,
#Deleted in new
chr3	37016522	37017014	chr3:37016522-37017014	7	-	37016522	37016522	16724991	1	492,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	37025830	37047740	chr3:37025830-37047740	0	+	37025830	37047689	789624	5	177,149,109,64,222,	0,2953,14355,16437,21688,
#Partially deleted in new
chr3	37025975	37050537	chr3:37025975-37050537	0	+	37025975	37050537	789624	4	32,149,109,52,	0,2808,14210,24510,
#Partially deleted in new
chr3	37025975	37050537	chr3:37025975-37050537	0	+	37025975	37050490	789624	3	32,149,52,	0,2808,24510,
#Partially deleted in new
chr3	37052655	37176360	chr3:37052655-37176360	3	-	37053850	37148983	789624	14	1306,105,80,121,50,133,93,171,117,45,87,145,67,301,	0,1755,2430,6134,11086,13154,22368,30980,42136,43960,76407,96238,121883,123404,
#Partially deleted in new
chr3	37052889	37174564	chr3:37052889-37174564	1	-	37053850	37148983	789624	28	1072,105,80,121,50,133,102,93,93,171,72,117,45,90,69,57,48,45,51,75,66,42,45,57,51,87,145,26,	0,1521,2196,5900,10852,12920,13334,19900,22134,30746,38577,41902,43726,50034,52565,55183,55747,56637,56763,58101,60025,62164,68602,68745,74740,76173,96004,121649,
#Partially deleted in new
chr3	37053003	37176337	chr3:37053003-37176337	1	-	37053850	37148983	789624	15	958,105,80,121,50,133,93,171,72,117,45,87,145,67,278,	0,1407,2082,5786,10738,12806,22020,30632,38463,41788,43612,76059,95890,121535,123056,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	37053003	37065334	chr3:37053003-37065334	0	-	37053003	37053003	8553170	5	958,105,80,121,1593,	0,1407,2082,5786,10738,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	37053686	37068763	chr3:37053686-37068763	0	-	37053686	37053686	8553170	6	275,105,80,121,50,2954,	0,724,1399,5103,10055,12123,
#Partially deleted in new
chr3	37053720	37175189	chr3:37053720-37175189	1	-	37053850	37148983	789624	19	241,105,80,121,50,133,93,93,171,117,45,48,66,45,57,87,145,67,27,	0,690,1365,5069,10021,12089,19069,21303,29915,41071,42895,54916,59194,67771,67914,75342,95173,120818,121442,
#Partially deleted in new
chr3	37053749	37176308	chr3:37053749-37176308	1	-	37053850	37148983	789624	15	212,105,80,121,50,133,93,171,72,117,45,87,145,67,491,	0,661,1336,5040,9992,12060,21274,29886,37717,41042,42866,75313,95144,120789,122068,
#Partially deleted in new
chr3	37058858	37083750	chr3:37058858-37083750	0	-	37058858	37083750	789624	6	52,50,133,102,93,115,	0,4883,6951,7365,16165,24777,
#Partially deleted in new
chr3	37063741	37066684	chr3:37063741-37066684	0	-	37063741	37063741	8553170	3	50,133,461,	0,2068,2482,
#Partially deleted in new
chr3	37075023	37176532	chr3:37075023-37176532	0	-	37075023	37148983	789624	9	93,171,72,117,45,87,145,67,164,	0,8612,16443,19768,21592,54039,73870,99515,101345,
#Partially deleted in new
chr3	37083644	37111915	chr3:37083644-37111915	0	-	37083644	37083644	8553170	6	162,72,117,45,75,90,	0,7822,11147,12971,27346,28181,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	37093132	37093234	chr3:37093132-37093234	3	-	37093132	37093132	8553170	1	102,	0,
#Partially deleted in new
chr3	37121463	37183689	chr3:37121463-37183689	0	-	37121463	37121463	8553170	6	73,87,145,43,67,148,	0,7599,27430,33150,53075,62078,
#Partially deleted in new
chr3	37121665	37176251	chr3:37121665-37176251	0	-	37121665	37148983	789624	6	26,87,145,43,67,192,	0,7397,27228,32948,52873,54394,
#Partially deleted in new
chr3	37129062	37175135	chr3:37129062-37175135	0	-	37129062	37148983	789624	4	87,145,67,419,	0,19831,45476,45654,
#Partially deleted in new
chr3	37129062	37175209	chr3:37129062-37175209	0	-	37129062	37148983	789624	5	87,145,43,67,47,	0,19831,25551,45476,46100,
#Partially deleted in new
chr3	37129062	37175215	chr3:37129062-37175215	0	-	37129062	37148983	789624	4	87,145,67,53,	0,19831,45476,46100,
#Deleted in new
chr3	37134657	37135102	chr3:37134657-37135102	7	+	37134657	37134657	16724991	1	445,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	37140326	37140430	chr3:37140326-37140430	3	+	37140326	37140326	8553170	1	104,	0,
#Deleted in new
chr3	37143511	37143958	chr3:37143511-37143958	7	-	37143511	37143511	16724991	1	447,	0,
#Partially deleted in new
chr3	37148926	37176057	chr3:37148926-37176057	0	-	37148926	37148926	8553170	4	112,43,67,240,	0,5687,25612,26891,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	37170332	37176302	chr3:37170332-37176302	0	-	37170332	37170332	8553170	3	734,67,243,	0,4206,5727,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	37172769	37176144	chr3:37172769-37176144	0	-	37172769	37172769	8553170	3	257,67,85,	0,1769,3290,
#Deleted in new
chr3	37174118	37176327	chr3:37174118-37176327	0	-	37174118	37174118	8553170	2	487,268,	0,1941,
#Partially deleted in new
chr3	37182106	37182734	chr3:37182106-37182734	3	+	37182106	37182106	8553170	1	628,	0,
#Deleted in new
chr3	37196203	37196666	chr3:37196203-37196666	7	+	37196203	37196203	16724991	1	463,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	37216778	37217988	chr3:37216778-37217988	3	+	37216778	37216778	8553170	1	1210,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	37241788	37244177	chr3:37241788-37244177	3	-	37241788	37241788	789624	1	2389,	0,
#Partially deleted in new
chr3	37243176	37366751	chr3:37243176-37366751	3	+	37243550	37361272	0	24	446,90,315,48,57,99,133,188,84,148,179,132,156,4238,122,131,114,21,69,76,104,87,63,672,	0,8218,38781,42837,46058,51802,52910,55656,56111,59008,72243,75886,78554,80411,85239,85786,91876,93966,94489,96947,104016,111924,118066,122903,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	37243190	37320382	chr3:37243190-37320382	0	+	37243190	37243190	8553170	16	432,119,907,73,181,48,86,57,99,133,188,84,148,98,179,1320,	0,2112,6510,8204,38901,42823,44336,46044,51788,52896,55642,56097,58994,70231,72229,75872,
#Partially deleted in new
chr3	37243246	37366749	chr3:37243246-37366749	1	+	37243550	37366103	789624	4	376,90,315,670,	0,8148,38711,122833,
#Partially deleted in new
chr3	37243251	37366745	chr3:37243251-37366745	1	+	37243550	37366103	0	23	371,90,66,315,48,57,99,133,188,84,148,179,132,156,4238,122,131,114,69,76,104,87,666,	0,8143,30284,38706,42762,45983,51727,52835,55581,56036,58933,72168,75811,78479,80336,85164,85711,91801,94414,96872,103941,111849,122828,
#Partially deleted in new
chr3	37243269	37315506	chr3:37243269-37315506	0	+	37243550	37315506	789624	11	353,90,66,315,57,96,133,188,84,148,87,	0,8125,30266,38688,45965,51712,52817,55563,56018,58915,72150,
#Partially deleted in new
chr3	37243269	37302769	chr3:37243269-37302769	1	+	37294987	37302769	789624	11	353,90,66,315,55,99,133,188,84,148,14,	0,8125,30266,38688,45965,51709,52817,55563,56018,58915,59486,
#Partially deleted in new
chr3	37243270	37324959	chr3:37243270-37324959	0	+	37243550	37324959	789624	5	352,90,66,156,1372,	0,8124,30265,78460,80317,
#Partially deleted in new
chr3	37243337	37281985	chr3:37243337-37281985	0	+	37243550	37281985	789624	5	285,90,99,66,28,	0,8057,23504,30198,38620,
#Partially deleted in new
chr3	37243423	37295077	chr3:37243423-37295077	0	+	37243423	37243423	8553170	5	199,90,315,57,99,	0,7971,38534,45811,51555,
#Deleted in new
chr3	37275692	37276598	chr3:37275692-37276598	7	+	37275692	37275692	16724991	1	906,	0,
#Partially deleted in new
chr3	37282182	37366750	chr3:37282182-37366750	0	+	37282182	37366103	789624	21	90,48,57,99,133,188,84,148,179,132,156,4238,122,131,114,21,69,76,104,87,671,	0,3831,7052,12796,13904,16650,17105,20002,33237,36880,39548,41405,46233,46780,52870,54960,55483,57941,65010,72918,83897,
#Partially deleted in new
chr3	37321588	37323621	chr3:37321588-37323621	0	+	37321588	37321588	8553170	2	298,34,	0,1999,
#Deleted in new
chr3	37327764	37329339	chr3:37327764-37329339	0	+	37327764	37327764	8553170	3	61,122,377,	0,651,1198,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	37341648	37341766	chr3:37341648-37341766	7	+	37341648	37341648	16724991	1	118,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	37399570	37418374	chr3:37399570-37418374	0	+	37399570	37399570	8553170	5	89,172,171,124,1122,	0,11567,16983,17448,17682,
#Partially deleted in new
chr3	37417266	37435130	chr3:37417266-37435130	0	+	37417266	37417266	8553170	2	226,287,	0,17577,
#Partially deleted in new
chr3	37452114	37629519	chr3:37452114-37629519	1	+	37452374	37629396	789624	16	445,128,107,124,68,130,86,69,138,106,95,91,46,155,161,333,	0,18892,21239,29369,42386,51063,53885,56444,61648,65389,67145,71406,73911,81199,90310,177072,
#Partially deleted in new
chr3	37452118	37823514	chr3:37452118-37823514	3	+	37452374	37818989	789624	28	441,128,107,124,68,130,86,69,138,106,95,91,46,155,161,150,77,151,87,80,90,109,108,126,120,102,120,4624,	0,18888,21235,29365,42382,51059,53881,56440,61644,65385,67141,71402,73907,81195,90306,177068,201595,231746,280593,284785,289611,291807,298343,325273,327783,332858,351704,366772,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	37573150	37573213	chr3:37573150-37573213	3	-	37573150	37573150	8553170	1	63,	0,
#Partially deleted in new
chr3	37683875	37732999	chr3:37683875-37732999	0	+	37683875	37683875	8553170	2	140,288,	0,48836,
#Partially deleted in new
chr3	37745431	37753997	chr3:37745431-37753997	1	-	37745431	37745431	8553170	3	528,129,69,	0,4104,8497,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	37748109	37748900	chr3:37748109-37748900	7	+	37748109	37748109	16724991	1	791,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	37749218	37834748	chr3:37749218-37834748	1	-	37749218	37749218	8553170	4	470,124,87,70,	0,4710,71795,85460,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	37753688	37861738	chr3:37753688-37861738	1	-	37753688	37753688	789624	4	364,87,89,38,	0,67325,80990,108012,
#Partially deleted in new
chr3	37780014	37819390	chr3:37780014-37819390	0	+	37780014	37818989	789624	3	7,102,500,	0,4962,38876,
#Deleted in new
chr3	37789920	37790445	chr3:37789920-37790445	7	-	37789920	37789920	16724991	1	525,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	37790750	37861748	chr3:37790750-37861748	1	-	37790750	37790750	8553170	5	161,177,87,89,48,	0,17953,30263,43928,70950,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	37790864	37861774	chr3:37790864-37861774	1	-	37790864	37790864	8553170	6	47,107,177,87,89,74,	0,15214,17839,30149,43814,70836,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	37805828	37821100	chr3:37805828-37821100	0	-	37805828	37805828	8553170	2	3052,87,	0,15185,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	37806077	37861728	chr3:37806077-37861728	1	-	37806077	37806077	8553170	5	151,177,87,89,28,	0,2626,14936,28601,55623,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	37808467	37835071	chr3:37808467-37835071	0	-	37808467	37808467	8553170	3	413,87,393,	0,12546,26211,
#Partially deleted in new
chr3	37808494	37821410	chr3:37808494-37821410	0	-	37808494	37808494	8553170	3	386,121,397,	0,10315,12519,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	37808495	37861720	chr3:37808495-37861720	1	-	37808495	37808495	8553170	5	385,121,87,89,20,	0,10314,12518,26183,53205,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	37808495	37851450	chr3:37808495-37851450	0	-	37808495	37808495	8553170	5	385,121,87,89,27,	0,10314,12518,26183,42928,
#Partially deleted in new
chr3	37808495	37861732	chr3:37808495-37861732	0	-	37808495	37808495	8553170	2	385,32,	0,53205,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	37808495	37861727	chr3:37808495-37861727	0	-	37808495	37808495	8553170	4	385,87,89,27,	0,12518,26183,53205,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	37808500	37860470	chr3:37808500-37860470	2	-	37808500	37808500	8553170	5	380,87,89,46,293,	0,12513,26178,42946,51677,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	37818276	37861765	chr3:37818276-37861765	1	-	37818276	37818276	8553170	4	654,87,89,65,	0,2737,16402,43424,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	37820915	37835163	chr3:37820915-37835163	1	-	37820915	37820915	8553170	2	185,485,	0,13763,
#Partially deleted in new
chr3	37861959	37984469	chr3:37861959-37984469	1	+	37862199	37980867	0	7	319,155,102,57,93,186,3728,	0,85097,102611,105866,109447,113749,118782,
#Partially deleted in new
chr3	37862173	37984469	chr3:37862173-37984469	3	+	37862199	37980867	0	8	105,155,33,102,57,93,186,3728,	0,84883,94937,102397,105652,109233,113535,118568,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	37862177	37947171	chr3:37862177-37947171	0	+	37862199	37911761	789624	3	101,155,115,	0,49495,84879,
#Partially deleted in new
chr3	37944713	37975786	chr3:37944713-37975786	0	+	37944713	37944713	8553170	7	91,155,33,102,57,93,78,	0,2343,12397,19857,23112,26693,30995,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	37954416	37981125	chr3:37954416-37981125	0	+	37954416	37954416	8553170	7	493,167,102,57,93,186,384,	0,574,10154,13409,16990,21292,26325,
#Partially deleted in new
chr3	37964578	37968432	chr3:37964578-37968432	0	+	37964578	37968344	789624	3	94,57,217,	0,3247,3637,
#Partially deleted in new
chr3	37964636	37984468	chr3:37964636-37984468	0	+	37964636	37984266	789624	7	36,57,93,186,122,78,221,	0,3189,6770,11072,16105,17929,19611,
#Deleted in new
chr3	37969403	37969480	chr3:37969403-37969480	3	+	37969403	37969403	5263520	1	77,	0,
#Partially deleted in new
chr3	37975772	37982384	chr3:37975772-37982384	0	+	37975772	37981891	789624	3	122,122,560,	0,4969,6052,
#Partially deleted in new
chr3	37988058	38007188	chr3:37988058-38007188	3	+	37993672	38007055	789624	20	180,146,75,206,109,111,203,79,99,139,101,138,159,180,146,145,183,72,252,247,	0,5528,5839,6202,7680,9018,9424,10031,10207,10853,11280,13397,13643,14337,15109,16196,17733,18122,18390,18883,
#Partially deleted in new
chr3	37990725	37995789	chr3:37990725-37995789	0	+	37993672	37995789	789624	5	104,146,75,206,51,	0,2861,3172,3535,5013,
#Partially deleted in new
chr3	37991133	37997187	chr3:37991133-37997187	0	+	37993672	37997187	789624	6	39,146,75,206,109,111,	0,2453,2764,3127,4605,5943,
#Deleted in new
chr3	37993392	37994005	chr3:37993392-37994005	0	+	37993392	37993392	8553170	2	340,108,	0,505,
#Partially deleted in new
chr3	37993586	38007185	chr3:37993586-38007185	1	+	37993672	38007055	789624	19	146,75,206,109,111,203,79,99,139,101,138,159,180,146,145,183,72,252,244,	0,311,674,2152,3490,3896,4503,4679,5325,5752,7869,8115,8809,9581,10668,12205,12594,12862,13355,
#Partially deleted in new
chr3	37994152	38007161	chr3:37994152-38007161	1	+	37994178	38007055	789624	12	140,121,101,138,159,180,146,145,183,72,252,220,	0,4777,5186,7303,7549,8243,9015,10102,11639,12028,12296,12789,
#Partially deleted in new
chr3	37994152	38002480	chr3:37994152-38002480	0	+	37994152	37994152	8553170	10	314,109,111,203,79,99,139,101,138,779,	0,1586,2924,3330,3937,4113,4759,5186,7303,7549,
#Deleted in new
chr3	37998317	38002545	chr3:37998317-38002545	0	+	37998317	38000939	789624	7	47,139,101,79,138,159,150,	0,594,1021,2604,3138,3384,4078,
#Deleted in new
chr3	37999231	38003313	chr3:37999231-38003313	0	+	37999231	37999231	8553170	5	208,138,159,180,146,	0,2224,2470,3164,3936,
#Deleted in new
chr3	38000906	38007184	chr3:38000906-38007184	0	+	38000906	38000906	8553170	4	3493,183,520,243,	0,4885,5274,6035,
#Deleted in new
chr3	38004063	38006204	chr3:38004063-38006204	0	+	38004063	38004063	8553170	3	336,183,24,	0,1728,2117,
#Deleted in new
chr3	38007495	38008335	chr3:38007495-38008335	0	-	38007495	38007495	8553170	2	363,322,	0,518,
#Partially deleted in new
chr3	38007495	38029559	chr3:38007495-38029559	0	-	38007495	38007495	8553170	12	363,150,133,701,540,372,202,232,130,229,165,54,	0,518,739,962,1776,2408,2865,3718,4048,8995,12692,22010,
#Partially deleted in new
chr3	38007497	38029762	chr3:38007497-38029762	3	-	38007772	38029539	789624	15	361,150,133,179,117,160,159,150,145,202,232,130,229,165,257,	0,516,737,960,1544,1774,2155,2406,2633,2863,3716,4046,8993,12690,22008,
#Partially deleted in new
chr3	38007497	38024787	chr3:38007497-38024787	1	-	38007772	38024433	789624	15	361,150,133,179,117,160,159,150,145,202,232,130,229,165,451,	0,516,737,960,1544,1774,2155,2406,2633,2863,3716,4046,8993,12690,16839,
#Deleted in new
chr3	38008273	38008764	chr3:38008273-38008764	0	-	38008273	38008273	8553170	2	94,307,	0,184,
#Deleted in new
chr3	38008462	38010422	chr3:38008462-38010422	0	-	38008462	38008462	8553170	6	174,117,160,159,372,62,	0,579,809,1190,1441,1898,
#Deleted in new
chr3	38008577	38009883	chr3:38008577-38009883	0	-	38008577	38008577	8553170	4	59,117,160,231,	0,464,694,1075,
#Partially deleted in new
chr3	38011292	38019034	chr3:38011292-38019034	0	-	38011292	38011292	8553170	4	153,130,229,65,	0,251,5198,7677,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	38014567	38014669	chr3:38014567-38014669	3	+	38014567	38014567	8553170	1	102,	0,
#Partially deleted in new
chr3	38020228	38024576	chr3:38020228-38024576	0	-	38020228	38020228	8553170	2	124,421,	0,3927,
#Boundary problem: need 37, got 0, diff 37, mapped 0.0
chr3	38039204	38123549	chr3:38039204-38123549	3	+	38039225	38122412	789624	37	432,151,111,200,221,79,88,174,137,93,91,163,193,59,169,94,131,159,140,154,111,131,183,71,152,119,71,206,117,126,95,85,219,162,154,124,1261,	0,6338,20537,22964,23376,24636,44953,46069,47036,49091,53585,54400,55674,56683,57364,57977,58302,58539,61081,68379,69200,70227,70894,72472,73005,75137,75778,77248,77568,77770,78003,78322,78601,81243,82423,82866,83084,
#Partially deleted in new
chr3	38039204	38122737	chr3:38039204-38122737	1	+	38039225	38122605	789624	36	432,151,111,200,221,79,88,174,137,93,91,163,193,59,169,94,131,159,140,154,111,131,183,71,152,119,71,206,117,126,95,85,219,162,154,449,	0,6338,20537,22964,23376,24636,44953,46069,47036,49091,53585,54400,55674,56683,57364,57977,58302,58539,61081,68379,69200,70227,70894,72472,73005,75137,75778,77248,77568,77770,78003,78322,78601,81243,82423,83084,
#Partially deleted in new
chr3	38039204	38097798	chr3:38039204-38097798	0	+	38039204	38039204	8553170	17	432,151,111,200,221,79,88,174,137,93,91,163,1068,169,94,131,55,	0,6338,20537,22964,23376,24636,44953,46069,47036,49091,53585,54400,55674,57364,57977,58302,58539,
#Deleted in new
chr3	38051758	38052395	chr3:38051758-38052395	7	+	38051758	38051758	16724991	1	637,	0,
#Partially deleted in new
chr3	38062745	38095941	chr3:38062745-38095941	0	+	38062745	38088321	789624	6	56,79,88,93,163,54,	0,1095,21412,25550,30859,33142,
#Partially deleted in new
chr3	38062777	38086269	chr3:38062777-38086269	0	+	38062777	38062777	8553170	4	24,79,88,29,	0,1063,21380,23463,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	38103128	38123083	chr3:38103128-38123083	0	-	38103128	38103128	8553170	3	665,112,187,	0,19135,19768,
#Partially deleted in new
chr3	38109809	38111737	chr3:38109809-38111737	0	+	38109809	38109809	8553170	2	472,61,	0,1867,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	38117042	38124025	chr3:38117042-38124025	0	+	38117042	38117042	8553170	5	569,219,162,154,1737,	0,763,3405,4585,5246,
#Partially deleted in new
chr3	38122709	38137242	chr3:38122709-38137242	1	-	38123046	38137035	0	10	413,146,56,191,81,43,80,58,94,378,	0,2855,3116,3800,5076,8886,9216,11242,13882,14155,
#Partially deleted in new
chr3	38122709	38137208	chr3:38122709-38137208	3	-	38123046	38137035	0	12	413,146,56,180,191,81,99,43,80,58,94,344,	0,2855,3116,3452,3800,5076,6580,8886,9216,11242,13882,14155,
#Partially deleted in new
chr3	38122709	38137242	chr3:38122709-38137242	0	-	38129329	38137035	789624	10	413,146,56,539,81,99,80,58,94,378,	0,2855,3116,3452,5076,6580,9216,11242,13882,14155,
#Partially deleted in new
chr3	38122710	38137242	chr3:38122710-38137242	1	-	38131928	38137035	789624	11	412,146,56,180,191,81,99,43,80,94,378,	0,2854,3115,3451,3799,5075,6579,8885,9215,13881,14154,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	38122715	38132552	chr3:38122715-38132552	0	-	38122715	38122715	8553170	6	2995,875,81,99,43,627,	0,3110,5070,6574,8880,9210,
#Partially deleted in new
chr3	38122718	38137125	chr3:38122718-38137125	1	-	38123046	38137035	789624	10	404,146,56,180,191,81,99,58,94,261,	0,2846,3107,3443,3791,5067,6571,11233,13873,14146,
#Partially deleted in new
chr3	38122718	38133582	chr3:38122718-38133582	0	-	38122718	38122718	8553170	9	404,146,56,539,81,99,43,80,92,	0,2846,3107,3443,5067,6571,8877,9207,10772,
#Partially deleted in new
chr3	38122832	38131946	chr3:38122832-38131946	0	-	38123046	38131946	789624	8	290,146,56,191,81,99,43,21,	0,2732,2993,3677,4953,6457,8763,9093,
#Partially deleted in new
chr3	38122909	38126342	chr3:38122909-38126342	0	-	38122909	38122909	8553170	3	213,146,517,	0,2655,2916,
#Partially deleted in new
chr3	38125291	38125394	chr3:38125291-38125394	3	-	38125291	38125291	8553170	1	103,	0,
#Partially deleted in new
chr3	38125563	38136624	chr3:38125563-38136624	0	-	38125563	38136624	789624	9	147,56,180,191,81,43,80,58,33,	0,262,598,946,2222,6032,6362,8388,11028,
#Partially deleted in new
chr3	38126450	38137137	chr3:38126450-38137137	0	-	38131928	38137035	789624	6	250,81,99,80,94,273,	0,1335,2839,5475,10141,10414,
#Partially deleted in new
chr3	38127630	38137092	chr3:38127630-38137092	0	-	38131928	38137035	789624	5	236,99,80,94,228,	0,1659,4295,8961,9234,
#Partially deleted in new
chr3	38129328	38134467	chr3:38129328-38134467	0	-	38129328	38129328	8553170	3	60,80,516,	0,2597,4623,
#Partially deleted in new
chr3	38133779	38137120	chr3:38133779-38137120	0	-	38133779	38133779	8553170	3	230,94,256,	0,2812,3085,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	38134395	38137081	chr3:38134395-38137081	0	-	38134395	38134395	8553170	4	157,111,94,217,	0,788,2196,2469,
#Partially deleted in new
chr3	38138477	38143022	chr3:38138477-38143022	3	+	38138700	38141286	789624	5	551,135,181,92,1891,	0,1386,1910,2279,2654,
#Partially deleted in new
chr3	38138477	38143019	chr3:38138477-38143019	1	+	38138661	38141286	789624	4	551,181,92,1888,	0,1910,2279,2654,
#Partially deleted in new
chr3	38138477	38143019	chr3:38138477-38143019	1	+	38138661	38141152	789624	3	551,92,1888,	0,2279,2654,
#Partially deleted in new
chr3	38138551	38141660	chr3:38138551-38141660	1	+	38138700	38141286	789624	4	477,181,92,529,	0,1836,2205,2580,
#Partially deleted in new
chr3	38138650	38143022	chr3:38138650-38143022	0	+	38138650	38138650	8553170	3	378,461,1891,	0,1737,2481,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	38138656	38140579	chr3:38138656-38140579	0	+	38138656	38138656	8553170	2	372,716,	0,1207,
#Partially deleted in new
chr3	38138656	38141643	chr3:38138656-38141643	1	+	38138700	38141152	0	3	372,92,512,	0,2100,2475,
#Partially deleted in new
chr3	38138660	38143022	chr3:38138660-38143022	1	+	38138661	38141286	789624	5	368,135,205,92,1891,	0,1203,1727,2096,2471,
#Partially deleted in new
chr3	38138660	38141450	chr3:38138660-38141450	1	+	38138661	38141152	0	4	368,135,92,319,	0,1203,2096,2471,
#Partially deleted in new
chr3	38138661	38141286	chr3:38138661-38141286	1	+	38138661	38141286	789624	5	367,135,181,92,155,	0,1202,1726,2095,2470,
#Partially deleted in new
chr3	38139151	38141314	chr3:38139151-38141314	0	+	38139151	38139151	8553170	5	121,135,181,92,183,	0,712,1236,1605,1980,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	38139422	38143019	chr3:38139422-38143019	0	+	38139422	38139422	8553170	2	1426,1888,	0,1709,
#Partially deleted in new
chr3	38139739	38141265	chr3:38139739-38141265	0	+	38139739	38139739	8553170	5	41,135,181,92,134,	0,124,648,1017,1392,
#Partially deleted in new
chr3	38165088	38183047	chr3:38165088-38183047	0	+	38165088	38165088	8553170	2	426,45,	0,17914,
#Partially deleted in new
chr3	38165504	38255488	chr3:38165504-38255488	3	+	38165876	38252891	0	18	442,113,109,142,56,110,102,134,49,66,123,36,147,65,53,69,65,2672,	0,17498,25226,33217,50591,56073,58307,59066,64182,64860,71334,77238,80570,82163,84461,85898,86823,87312,
#Partially deleted in new
chr3	38165504	38250179	chr3:38165504-38250179	1	+	38165876	38250050	789624	15	442,113,109,142,56,110,102,134,49,66,123,36,147,65,214,	0,17498,25226,33217,50591,56073,58307,59066,64182,64860,71334,77238,80570,82163,84461,
#Partially deleted in new
chr3	38165646	38230693	chr3:38165646-38230693	0	+	38165876	38193331	789624	11	300,113,109,137,142,56,110,102,134,49,329,	0,17356,25084,27635,33075,50449,55931,58165,58924,64040,64718,
#Partially deleted in new
chr3	38216093	38225069	chr3:38216093-38225069	0	+	38216093	38216093	8553170	4	58,110,102,499,	0,5484,7718,8477,
#Partially deleted in new
chr3	38236660	38251412	chr3:38236660-38251412	0	+	38236660	38236660	8553170	6	301,36,147,65,53,10,	0,6082,9414,11007,13305,14742,
#Partially deleted in new
chr3	38265811	38278315	chr3:38265811-38278315	3	+	38265860	38277465	789624	10	427,104,155,169,121,95,215,109,216,944,	0,8460,8792,9177,9558,9766,10070,10475,11100,11560,
#Partially deleted in new
chr3	38265905	38276328	chr3:38265905-38276328	0	+	38265905	38275459	789624	7	333,104,169,121,95,215,42,	0,8366,9083,9464,9672,9976,10381,
#Deleted in new
chr3	38270282	38270767	chr3:38270282-38270767	7	-	38270282	38270282	16724991	1	485,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	38276013	38278757	chr3:38276013-38278757	0	+	38276013	38277465	8553170	3	83,216,1386,	0,898,1358,
#Partially deleted in new
chr3	38282293	38307699	chr3:38282293-38307699	0	+	38306422	38307699	789624	4	46,239,104,134,	0,24010,24960,25272,
#Partially deleted in new
chr3	38282297	38318249	chr3:38282297-38318249	3	+	38306026	38318249	789624	11	42,516,104,155,169,121,98,215,154,201,52,	0,23729,24956,25268,26656,30701,31090,31429,33260,34026,35900,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	38303772	38303879	chr3:38303772-38303879	3	-	38303772	38303772	8553170	1	107,	0,
#Deleted in new
chr3	38305173	38308161	chr3:38305173-38308161	0	+	38305173	38305173	8553170	2	1369,908,	0,2080,
#Partially deleted in new
chr3	38305935	38318575	chr3:38305935-38318575	1	+	38306026	38318249	789624	10	607,104,155,169,121,98,215,154,201,378,	0,1318,1630,3018,7063,7452,7791,9622,10388,12262,
#Partially deleted in new
chr3	38325236	38329070	chr3:38325236-38329070	7	-	38325236	38325236	16724991	4	129,123,153,171,	0,197,996,3663,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	38346759	38357158	chr3:38346759-38357158	1	+	38346868	38355802	789624	3	166,83,1417,	0,1790,8982,
#Partially deleted in new
chr3	38346778	38414976	chr3:38346778-38414976	3	+	38346868	38413013	0	19	147,83,70,81,87,129,66,73,119,82,41,116,116,74,97,59,88,95,2041,	0,1771,13560,16158,18420,18829,20029,21406,23277,25876,27683,28365,29338,30139,32467,48726,50293,54112,66157,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr3	38346797	38420651	chr3:38346797-38420651	1	+	38346868	38420057	8553170	18	128,83,70,87,129,66,73,119,82,41,116,116,74,97,59,88,95,810,	0,1752,13541,18401,18810,20010,21387,23258,25857,27664,28346,29319,30120,32448,48707,50274,54093,73044,
#Partially deleted in new
chr3	38346807	38414976	chr3:38346807-38414976	0	+	38346868	38365244	789624	17	118,83,87,129,66,73,119,82,41,116,116,74,97,59,88,95,2041,	0,1742,18391,18800,20000,21377,23248,25847,27654,28336,29309,30110,32438,48697,50264,54083,66128,
#Partially deleted in new
chr3	38346814	38413289	chr3:38346814-38413289	0	+	38346868	38373197	8553170	20	111,83,70,81,87,129,66,73,119,82,165,41,116,116,74,97,59,88,95,354,	0,1735,13524,16122,18384,18793,19993,21370,23241,25840,26300,27647,28329,29302,30103,32431,48690,50257,54076,66121,
#Partially deleted in new
chr3	38366807	38370281	chr3:38366807-38370281	0	+	38366807	38366807	8553170	3	66,73,226,	0,1377,3248,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	38376920	38421348	chr3:38376920-38421348	0	+	38376920	38376920	8553170	6	71,97,59,88,95,136,	0,2325,18584,20151,23970,44292,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	38451026	38454820	chr3:38451026-38454820	3	-	38451026	38451026	789624	2	2199,318,	0,3476,
#Partially deleted in new
chr3	38453850	38493142	chr3:38453850-38493142	3	+	38454322	38483332	0	11	524,208,110,152,144,144,149,115,139,131,10005,	0,23436,24010,24290,24524,25277,25827,27500,28347,28579,29287,
#Partially deleted in new
chr3	38454318	38483373	chr3:38454318-38483373	0	+	38454318	38454318	8553170	10	56,208,110,378,144,149,115,139,131,236,	0,22968,23542,23822,24809,25359,27032,27879,28111,28819,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	38473445	38483374	chr3:38473445-38483374	0	+	38473445	38473445	8553170	10	4049,110,152,144,144,149,115,139,131,237,	0,4415,4695,4929,5682,6232,7905,8752,8984,9692,
#Partially deleted in new
chr3	38496126	38524413	chr3:38496126-38524413	0	+	38496367	38496850	789624	8	404,87,61,70,140,77,115,513,	0,716,1502,2640,5228,7488,10727,27774,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	38496271	38525951	chr3:38496271-38525951	3	+	38496367	38524362	0	6	259,150,140,77,115,2051,	0,1357,5083,7343,10582,27629,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	38496271	38524868	chr3:38496271-38524868	0	+	38496367	38498952	789624	7	259,56,64,140,77,115,968,	0,1357,2654,5083,7343,10582,27629,
#Partially deleted in new
chr3	38496339	38501502	chr3:38496339-38501502	0	+	38496367	38496850	789624	4	191,87,150,148,	0,503,1289,5015,
#Deleted in new
chr3	38496341	38496850	chr3:38496341-38496850	1	+	38496367	38496850	789624	2	189,8,	0,501,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	38496342	38524818	chr3:38496342-38524818	0	+	38496367	38496850	789624	8	188,87,150,75,140,77,115,918,	0,500,1286,3747,5012,7272,10511,27558,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	38496344	38524699	chr3:38496344-38524699	1	+	38496367	38524362	0	5	186,140,77,115,799,	0,5010,7270,10509,27556,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	38496344	38524950	chr3:38496344-38524950	0	+	38496367	38506858	789624	8	186,56,140,77,115,119,503,352,	0,1284,5010,7270,10509,17405,27556,28254,
#Deleted in new
chr3	38496344	38498022	chr3:38496344-38498022	0	+	38496344	38496344	8553170	2	186,394,	0,1284,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	38496364	38524568	chr3:38496364-38524568	0	+	38496367	38496850	789624	9	166,87,56,64,67,140,77,115,668,	0,478,1264,2561,3316,4990,7250,10489,27536,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	38496364	38525121	chr3:38496364-38525121	0	+	38496367	38499735	789624	9	166,150,64,67,75,140,77,115,1221,	0,1264,2561,3316,3725,4990,7250,10489,27536,
#Partially deleted in new
chr3	38496480	38523216	chr3:38496480-38523216	0	+	38496480	38523202	789624	6	50,150,140,77,115,44,	0,1148,4874,7134,10373,26692,
#Partially deleted in new
chr3	38496484	38524060	chr3:38496484-38524060	0	+	38496484	38506858	789624	7	46,56,140,77,115,116,160,	0,1144,4870,7130,10369,22777,27416,
#Partially deleted in new
chr3	38496491	38513851	chr3:38496491-38513851	0	+	38496491	38496850	789624	7	39,87,61,79,77,33,79,	0,351,1137,4924,7123,10362,17281,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	38496737	38542161	chr3:38496737-38542161	0	+	38496737	38496737	8553170	7	952,75,140,77,115,45,395,	0,3352,4617,6877,10116,27163,45029,
#Partially deleted in new
chr3	38501161	38524246	chr3:38501161-38524246	0	+	38501161	38501161	8553170	4	333,77,115,346,	0,2453,5692,22739,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	38505479	38505581	chr3:38505479-38505581	3	-	38505479	38505479	8553170	1	102,	0,
#Deleted in new
chr3	38515447	38515830	chr3:38515447-38515830	7	-	38515447	38515447	16724991	1	383,	0,
#Deleted in new
chr3	38526801	38527325	chr3:38526801-38527325	7	-	38526801	38526801	16724991	1	524,	0,
#Partially deleted in new
chr3	38548056	38633349	chr3:38548056-38633349	1	-	38550320	38633307	789624	26	3502,271,105,138,282,123,174,155,121,162,441,351,174,239,133,372,180,198,142,64,231,92,129,90,119,315,	0,6222,7599,8384,12090,14358,18352,27240,28604,31277,32874,37634,39343,49672,50861,55655,56672,57894,58612,60094,61677,65918,72786,74343,82254,84978,
#Partially deleted in new
chr3	38548061	38649672	chr3:38548061-38649672	1	-	38550320	38633307	789624	28	3497,271,105,138,54,282,123,174,155,121,162,441,351,174,239,133,372,180,198,142,64,231,92,129,90,119,325,142,	0,6217,7594,8379,9169,12085,14353,18347,27235,28599,31272,32869,37629,39338,49667,50856,55650,56667,57889,58607,60089,61672,65913,72781,74338,82249,84973,101469,
#Partially deleted in new
chr3	38548061	38633362	chr3:38548061-38633362	1	-	38550320	38633307	0	27	3497,271,105,138,54,282,123,174,155,121,159,441,351,174,239,133,372,180,198,142,64,231,92,129,90,119,328,	0,6217,7594,8379,9169,12085,14353,18347,27235,28599,31272,32869,37629,39338,49667,50856,55650,56667,57889,58607,60089,61672,65681,72781,74338,82249,84973,
#Partially deleted in new
chr3	38548061	38649672	chr3:38548061-38649672	1	-	38550320	38633307	789624	27	3497,271,105,138,282,123,174,155,121,162,441,351,174,239,133,372,180,198,142,64,231,92,129,90,119,325,142,	0,6217,7594,8379,12085,14353,18347,27235,28599,31272,32869,37629,39338,49667,50856,55650,56667,57889,58607,60089,61672,65913,72781,74338,82249,84973,101469,
#Partially deleted in new
chr3	38548061	38649673	chr3:38548061-38649673	1	-	38550320	38633307	789624	27	3497,271,105,138,54,282,123,174,155,121,441,351,174,239,133,372,180,198,142,64,231,92,129,90,119,325,143,	0,6217,7594,8379,9169,12085,14353,18347,27235,28599,32869,37629,39338,49667,50856,55650,56667,57889,58607,60089,61672,65913,72781,74338,82249,84973,101469,
#Partially deleted in new
chr3	38548065	38649628	chr3:38548065-38649628	3	-	38550320	38633307	0	28	3493,271,105,138,54,282,123,174,155,121,162,441,351,174,239,133,372,180,198,142,64,231,92,129,90,119,325,98,	0,6213,7590,8375,9165,12081,14349,18343,27231,28595,31268,32865,37625,39334,49663,50852,55646,56663,57885,58603,60085,61668,65677,72777,74334,82245,84969,101465,
#Partially deleted in new
chr3	38549127	38633332	chr3:38549127-38633332	1	-	38550320	38633307	789624	27	2431,175,105,138,54,282,123,174,155,121,159,441,351,174,239,133,372,180,198,142,64,231,92,129,90,119,298,	0,5247,6528,7313,8103,11019,13287,17281,26169,27533,30206,31803,36563,38272,48601,49790,54584,55601,56823,57541,59023,60606,64847,71715,73272,81183,83907,
#Partially deleted in new
chr3	38549967	38633349	chr3:38549967-38633349	1	-	38550320	38633307	789624	26	1591,271,105,138,54,282,123,174,155,121,441,351,174,239,133,372,180,198,142,64,231,92,129,90,119,315,	0,4311,5688,6473,7263,10179,12447,16441,25329,26693,30963,35723,37432,47761,48950,53744,54761,55983,56701,58183,59766,64007,70875,72432,80343,83067,
#Partially deleted in new
chr3	38550320	38633316	chr3:38550320-38633316	1	-	38550320	38633307	789624	26	1238,271,105,138,54,282,123,174,155,121,441,351,174,239,133,372,180,198,142,64,231,92,129,90,119,282,	0,3958,5335,6120,6910,9826,12094,16088,24976,26340,30610,35370,37079,47408,48597,53391,54408,55630,56348,57830,59413,63422,70522,72079,79990,82714,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	38552980	38554549	chr3:38552980-38554549	0	-	38552980	38552980	8553170	2	320,271,	0,1298,
#Partially deleted in new
chr3	38614027	38649673	chr3:38614027-38649673	0	-	38614027	38614027	8553170	6	576,129,90,119,325,143,	0,6815,8372,16283,19007,35503,
#Partially deleted in new
chr3	38614542	38633349	chr3:38614542-38633349	1	-	38614542	38633307	789624	5	61,129,89,120,315,	0,6300,7857,15767,18492,
#Deleted in new
chr3	38629841	38633220	chr3:38629841-38633220	0	-	38629841	38629841	8553170	2	588,186,	0,3193,
#Partially deleted in new
chr3	38633110	38645776	chr3:38633110-38645776	0	-	38633110	38633307	789624	2	249,86,	0,12580,
#Partially deleted in new
chr3	38696806	38816217	chr3:38696806-38816217	3	-	38697348	38794010	789624	28	1756,271,105,138,54,285,123,174,155,124,141,447,360,174,239,112,294,171,198,142,67,192,92,129,81,119,302,181,	0,5032,10472,12671,14037,15354,17151,21846,25451,26623,28367,29799,31735,42708,45484,53266,55412,58981,59867,60211,63874,64385,66698,74472,92149,95243,96934,119230,
#Partially deleted in new
chr3	38697345	38794010	chr3:38697345-38794010	1	-	38697348	38794010	789624	27	1217,271,101,142,54,285,123,174,155,124,141,447,360,174,239,112,294,171,198,142,67,192,92,129,81,119,270,	0,4493,9933,12128,13498,14815,16612,21307,24912,26084,27828,29260,31196,42169,44945,52727,54873,58442,59328,59672,63335,63846,66159,73933,91610,94704,96395,
#Partially deleted in new
chr3	38697345	38794042	chr3:38697345-38794042	1	-	38697348	38794010	789624	27	1217,271,105,138,54,285,123,174,155,124,138,447,360,174,239,112,294,171,198,142,67,192,92,129,81,119,302,	0,4493,9933,12132,13498,14815,16612,21307,24912,26084,27828,29260,31196,42169,44945,52727,54873,58442,59328,59672,63335,63846,66159,73933,91610,94704,96395,
#Partially deleted in new
chr3	38697345	38794010	chr3:38697345-38794010	1	-	38697348	38794010	789624	27	1217,271,105,138,54,285,123,174,155,124,141,447,360,174,239,112,294,171,198,142,67,192,92,129,81,119,270,	0,4493,9933,12132,13498,14815,16612,21307,24912,26084,27828,29260,31196,42169,44945,52727,54873,58442,59328,59672,63335,63846,66159,73933,91610,94704,96395,
#Deleted in new
chr3	38823901	38825302	chr3:38823901-38825302	3	+	38823901	38823901	8553170	3	38,251,119,	0,370,1282,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr3	38845768	38950561	chr3:38845768-38950561	3	-	38846693	38950362	789624	26	1974,271,105,138,54,264,102,174,155,115,114,432,381,180,239,130,174,198,142,67,180,95,129,102,119,466,	0,4712,17426,21552,24922,25676,26424,34181,37464,39519,40356,48764,51076,54125,58096,59423,62180,63228,64297,74166,75307,79646,81034,99642,101020,104327,
#Partially deleted in new
chr3	38846693	38950362	chr3:38846693-38950362	1	-	38846693	38950362	789624	25	1049,271,105,138,54,264,102,174,155,115,432,381,180,239,130,174,198,142,67,180,95,129,102,119,267,	0,3787,16501,20627,23997,24751,25499,33256,36539,38594,47839,50151,53200,57171,58498,61255,62303,63372,73241,74382,78721,80109,98717,100095,103402,
#Partially deleted in new
chr3	38849277	38950561	chr3:38849277-38950561	1	-	38850472	38950362	789624	25	1474,105,138,54,264,102,174,155,115,114,432,381,180,239,130,174,198,142,67,180,95,129,102,119,466,	0,13917,18043,21413,22167,22915,30672,33955,36010,36847,45255,47567,50616,54587,55914,58671,59719,60788,70657,71798,76137,77525,96133,97511,100818,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	39025986	39026093	chr3:39025986-39026093	3	+	39025986	39025986	8553170	1	107,	0,
#Partially deleted in new
chr3	39051997	39096388	chr3:39051997-39096388	3	+	39052025	39094743	0	19	76,141,79,83,130,89,102,225,75,103,98,108,97,96,106,88,77,193,1741,	0,11052,13813,14550,14748,16773,17645,22728,25141,26139,27713,32157,32647,33517,36130,37233,39627,41876,42650,
#Partially deleted in new
chr3	39052012	39068820	chr3:39052012-39068820	0	+	39052025	39066780	789624	6	61,141,79,83,149,50,	0,11037,13798,14535,14714,16758,
#Partially deleted in new
chr3	39052015	39095078	chr3:39052015-39095078	0	+	39052025	39066550	789624	18	58,141,83,130,89,102,225,75,103,98,108,97,96,106,88,77,193,431,	0,11034,14532,14730,16755,17627,22710,25123,26121,27695,32139,32629,33499,36112,37215,39609,41858,42632,
#Partially deleted in new
chr3	39052018	39069690	chr3:39052018-39069690	0	+	39052025	39065826	789624	7	55,141,99,83,130,89,48,	0,11031,13772,14529,14727,16752,17624,
#Partially deleted in new
chr3	39052019	39096671	chr3:39052019-39096671	0	+	39052025	39068782	789624	19	54,141,79,83,89,102,225,75,103,98,108,97,96,106,88,77,193,767,1191,	0,11030,13791,14528,16751,17623,22706,25119,26117,27691,32135,32625,33495,36108,37211,39605,41854,42628,43461,
#Partially deleted in new
chr3	39052300	39074749	chr3:39052300-39074749	0	+	39065831	39074749	789624	8	301,141,79,83,130,89,102,24,	0,10749,13510,14247,14445,16470,17342,22425,
#Partially deleted in new
chr3	39078010	39084187	chr3:39078010-39084187	0	+	39078010	39078010	8553170	3	229,98,33,	0,1700,6144,
#Partially deleted in new
chr3	39078160	39086384	chr3:39078160-39086384	0	+	39078160	39078160	8553170	6	79,98,108,97,96,84,	0,1550,5994,6484,7354,8140,
#Deleted in new
chr3	39087817	39091694	chr3:39087817-39091694	0	+	39087817	39087817	8553170	3	416,88,70,	0,1413,3807,
#Partially deleted in new
chr3	39089567	39096664	chr3:39089567-39096664	0	+	39089567	39089567	8553170	2	2134,2791,	0,4306,
#Partially deleted in new
chr3	39096658	39108363	chr3:39096658-39108363	3	-	39098235	39107541	0	9	1831,153,151,199,131,87,204,81,885,	0,2082,2694,3646,4088,4357,6019,6814,10820,
#Partially deleted in new
chr3	39096658	39107638	chr3:39096658-39107638	0	-	39096658	39096658	8553170	8	1831,153,151,573,87,204,81,160,	0,2082,2694,3646,4357,6019,6814,10820,
#Partially deleted in new
chr3	39096664	39107621	chr3:39096664-39107621	0	-	39100380	39107541	0	9	1825,153,151,199,90,87,204,81,143,	0,2076,2688,3640,4123,4351,6013,6808,10814,
#Partially deleted in new
chr3	39096664	39107569	chr3:39096664-39107569	0	-	39098809	39107541	789624	9	1825,153,151,150,131,87,204,81,91,	0,2076,2688,3640,4082,4351,6013,6808,10814,
#Partially deleted in new
chr3	39096667	39107638	chr3:39096667-39107638	1	-	39098235	39107541	789624	6	1822,153,151,150,87,160,	0,2073,2685,3637,4348,10811,
#Partially deleted in new
chr3	39097458	39107336	chr3:39097458-39107336	0	-	39098809	39102806	0	9	1031,113,151,199,131,87,204,81,349,	0,1282,1894,2846,3288,3557,5219,6014,9529,
#Partially deleted in new
chr3	39098027	39107640	chr3:39098027-39107640	1	-	39098235	39107541	789624	7	462,153,151,199,131,87,162,	0,713,1325,2277,2719,2988,9451,
#Deleted in new
chr3	39098386	39099209	chr3:39098386-39099209	0	-	39098386	39098386	8553170	2	103,469,	0,354,
#Partially deleted in new
chr3	39099167	39107608	chr3:39099167-39107608	0	-	39099167	39099167	8553170	3	336,87,130,	0,1848,8311,
#Partially deleted in new
chr3	39099398	39107579	chr3:39099398-39107579	0	-	39099398	39099398	8553170	6	105,199,315,204,81,101,	0,906,1389,3279,4074,8080,
#Partially deleted in new
chr3	39099410	39103511	chr3:39099410-39103511	0	-	39100842	39103511	789624	7	93,199,131,87,61,204,39,	0,894,1336,1605,2099,3267,4062,
#Deleted in new
chr3	39099434	39100636	chr3:39099434-39100636	0	-	39099434	39099434	8553170	2	69,332,	0,870,
#Partially deleted in new
chr3	39100434	39107638	chr3:39100434-39107638	0	-	39100434	39100434	8553170	3	69,315,160,	0,353,7044,
#Partially deleted in new
chr3	39100456	39107614	chr3:39100456-39107614	0	-	39100456	39100456	8553170	3	47,356,136,	0,290,7022,
#Partially deleted in new
chr3	39100661	39107611	chr3:39100661-39107611	0	-	39100661	39100661	8553170	2	441,133,	0,6817,
#Deleted in new
chr3	39100791	39101472	chr3:39100791-39101472	0	-	39100791	39100791	8553170	2	86,457,	0,224,
#Partially deleted in new
chr3	39100851	39107181	chr3:39100851-39107181	0	-	39100851	39107175	789624	5	26,87,204,81,189,	0,164,1826,2621,6141,
#Partially deleted in new
chr3	39101022	39107635	chr3:39101022-39107635	0	-	39101022	39101022	8553170	5	80,61,189,81,157,	0,487,1670,2450,6456,
#Partially deleted in new
chr3	39101022	39107140	chr3:39101022-39107140	0	-	39101022	39102806	789624	4	80,204,81,172,	0,1655,2450,5946,
#Partially deleted in new
chr3	39102479	39107585	chr3:39102479-39107585	0	-	39102479	39102479	8553170	3	402,81,107,	0,993,4999,
#Partially deleted in new
chr3	39102597	39107611	chr3:39102597-39107611	0	-	39102597	39102597	8553170	3	284,81,133,	0,875,4881,
#Partially deleted in new
chr3	39102677	39107633	chr3:39102677-39107633	0	-	39102677	39102677	8553170	3	322,81,155,	0,795,4801,
#Partially deleted in new
chr3	39102753	39107863	chr3:39102753-39107863	0	-	39102753	39107541	789624	3	128,75,385,	0,719,4725,
#Partially deleted in new
chr3	39102782	39107627	chr3:39102782-39107627	0	-	39102782	39102782	8553170	3	325,81,149,	0,690,4696,
#Partially deleted in new
chr3	39102827	39107627	chr3:39102827-39107627	0	-	39102827	39102827	8553170	3	124,81,149,	0,645,4651,
#Deleted in new
chr3	39102839	39103725	chr3:39102839-39103725	0	-	39102839	39102839	8553170	2	42,253,	0,633,
#Partially deleted in new
chr3	39103173	39107630	chr3:39103173-39107630	0	-	39103173	39103173	8553170	2	380,152,	0,4305,
#Partially deleted in new
chr3	39107703	39138900	chr3:39107703-39138900	3	+	39107837	39138788	789624	29	161,130,111,167,123,158,109,99,193,98,201,130,155,216,239,73,111,139,104,189,111,82,151,162,193,225,121,68,190,	0,1381,2325,3147,4754,6881,10365,12218,13293,17359,17628,18557,20630,21013,21368,22375,22544,22997,23288,25348,26514,27389,28653,29195,29491,29782,30563,30852,31007,
#Partially deleted in new
chr3	39107716	39119657	chr3:39107716-39119657	0	+	39107716	39107716	8553170	7	148,130,111,167,123,158,1589,	0,1368,2312,3134,4741,6868,10352,
#Partially deleted in new
chr3	39107728	39138859	chr3:39107728-39138859	0	+	39107837	39137601	789624	29	136,130,111,167,123,158,85,99,193,98,201,130,158,216,239,73,111,139,104,189,111,82,151,162,59,225,121,68,149,	0,1356,2300,3122,4729,6856,10340,12193,13268,17334,17603,18532,20602,20988,21343,22350,22519,22972,23263,25323,26489,27364,28628,29170,29466,29757,30538,30827,30982,
#Partially deleted in new
chr3	39107729	39119968	chr3:39107729-39119968	0	+	39107837	39118086	789624	5	135,130,158,85,47,	0,1355,6855,10339,12192,
#Partially deleted in new
chr3	39107729	39119631	chr3:39107729-39119631	0	+	39107729	39107729	8553170	4	135,130,158,1563,	0,1355,6855,10339,
#Deleted in new
chr3	39107731	39110375	chr3:39107731-39110375	0	+	39107731	39107731	8553170	3	133,130,347,	0,1353,2297,
#Partially deleted in new
chr3	39107742	39119669	chr3:39107742-39119669	0	+	39107742	39107742	8553170	5	122,130,167,158,1601,	0,1342,3108,6842,10326,
#Deleted in new
chr3	39107805	39111018	chr3:39107805-39111018	0	+	39107837	39110875	789624	4	59,130,205,168,	0,1279,2223,3045,
#Partially deleted in new
chr3	39107806	39138879	chr3:39107806-39138879	1	+	39107837	39138788	789624	28	58,130,111,167,158,85,99,193,98,201,130,158,216,239,73,111,139,104,189,111,82,151,162,193,225,121,68,169,	0,1278,2222,3044,6778,10262,12115,13190,17256,17525,18454,20524,20910,21265,22272,22441,22894,23185,25245,26411,27286,28550,29092,29388,29679,30460,30749,30904,
#Deleted in new
chr3	39128810	39130160	chr3:39128810-39130160	0	+	39128810	39128810	8553170	2	500,82,	0,1268,
#Deleted in new
chr3	39129091	39130428	chr3:39129091-39130428	0	+	39129091	39129091	8553170	3	219,73,181,	0,987,1156,
#Partially deleted in new
chr3	39130965	39134585	chr3:39130965-39134585	0	+	39130965	39130965	8553170	3	130,83,368,	0,2192,3252,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	39131520	39138899	chr3:39131520-39138899	0	+	39131520	39131520	8553170	11	126,189,111,82,151,162,193,225,121,68,189,	0,1531,2697,3572,4836,5378,5674,5965,6746,7035,7190,
#Partially deleted in new
chr3	39132720	39138902	chr3:39132720-39138902	0	+	39132720	39132720	8553170	10	520,111,82,151,162,193,225,121,68,192,	0,1497,2372,3636,4178,4474,4765,5546,5835,5990,
#Deleted in new
chr3	39132974	39134860	chr3:39132974-39134860	0	+	39132974	39132974	8553170	2	266,643,	0,1243,
#Deleted in new
chr3	39136196	39137027	chr3:39136196-39137027	0	+	39136196	39136196	8553170	2	311,129,	0,702,
#Deleted in new
chr3	39136731	39137793	chr3:39136731-39137793	0	+	39136731	39136731	8553170	3	329,193,308,	0,463,754,
#Deleted in new
chr3	39138205	39138266	chr3:39138205-39138266	3	+	39138205	39138205	5263520	1	61,	0,
#Deleted in new
chr3	39138263	39138903	chr3:39138263-39138903	0	+	39138263	39138263	8553170	2	124,348,	0,292,
#Partially deleted in new
chr3	39141854	39153575	chr3:39141854-39153575	1	-	39143054	39146682	789624	5	2190,315,260,245,138,	0,2282,3142,4623,11583,
#Partially deleted in new
chr3	39142337	39154562	chr3:39142337-39154562	3	-	39143054	39146682	789624	5	1707,315,260,245,66,	0,1799,2659,4140,12159,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	39148280	39172952	chr3:39148280-39172952	3	+	39148280	39148280	8553170	4	4240,175,137,423,	0,4416,21656,24249,
#Deleted in new
chr3	39152905	39154723	chr3:39152905-39154723	3	+	39152905	39152905	8553170	1	1818,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	39161269	39161520	chr3:39161269-39161520	3	+	39161269	39161269	8553170	1	251,	0,
#Deleted in new
chr3	39183209	39192596	chr3:39183209-39192596	1	-	39185652	39189445	789624	3	2452,3437,151,	0,2879,9236,
#Deleted in new
chr3	39183214	39192594	chr3:39183214-39192594	3	-	39183913	39189445	789624	2	6311,149,	0,9231,
#Deleted in new
chr3	39183215	39192595	chr3:39183215-39192595	1	-	39183913	39185494	789624	2	2446,150,	0,9230,
#Deleted in new
chr3	39214198	39214672	chr3:39214198-39214672	7	+	39214198	39214198	16724991	1	474,	0,
#Partially deleted in new
chr3	39263493	39280034	chr3:39263493-39280034	1	-	39265441	39266509	789624	2	3025,81,	0,16460,
#Partially deleted in new
chr3	39263494	39281735	chr3:39263494-39281735	1	-	39265441	39281695	789624	2	3024,127,	0,18114,
#Partially deleted in new
chr3	39263494	39281273	chr3:39263494-39281273	3	-	39265441	39266509	789624	2	3024,231,	0,17548,
#Partially deleted in new
chr3	39263494	39280439	chr3:39263494-39280439	1	-	39265441	39266509	789624	2	3024,191,	0,16754,
#Partially deleted in new
chr3	39266010	39280439	chr3:39266010-39280439	0	-	39266010	39266509	789624	2	508,191,	0,14238,
#Partially deleted in new
chr3	39266190	39281273	chr3:39266190-39281273	0	-	39266190	39266509	789624	2	328,231,	0,14852,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	39285984	39287920	chr3:39285984-39287920	7	+	39285984	39285984	16724991	1	1936,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	39329705	39333446	chr3:39329705-39333446	3	+	39332331	39333399	789624	2	124,1129,	0,2612,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	39329772	39333511	chr3:39329772-39333511	1	+	39332331	39332861	789624	3	57,114,907,	0,2545,2832,
#Partially deleted in new
chr3	39334978	39335939	chr3:39334978-39335939	7	+	39334978	39334978	16724991	1	961,	0,
#Partially deleted in new
chr3	39338128	39338879	chr3:39338128-39338879	7	-	39338128	39338128	16724991	2	319,157,	0,594,
#Deleted in new
chr3	39358544	39359922	chr3:39358544-39359922	7	+	39358544	39358544	16724991	1	1378,	0,
#Partially deleted in new
chr3	39383323	39397351	chr3:39383323-39397351	3	+	39383724	39396520	789624	7	470,122,85,180,169,167,954,	0,6171,7099,8117,8529,11086,13074,
#Partially deleted in new
chr3	39383369	39397351	chr3:39383369-39397351	1	+	39383724	39396520	789624	7	424,122,85,180,169,167,954,	0,6125,7053,8071,8483,11040,13028,
#Partially deleted in new
chr3	39383388	39391620	chr3:39383388-39391620	0	+	39383764	39391620	789624	5	405,28,122,85,180,	0,5973,6106,7034,8052,
#Partially deleted in new
chr3	39383396	39394418	chr3:39383396-39394418	0	+	39383724	39394418	789624	5	397,122,85,169,9,	0,6098,7026,8456,11013,
#Partially deleted in new
chr3	39383660	39394576	chr3:39383660-39394576	0	+	39383724	39394576	789624	6	133,122,37,180,169,167,	0,5834,6762,7780,8192,10749,
#Partially deleted in new
chr3	39384430	39396642	chr3:39384430-39396642	1	+	39389374	39396520	789624	8	64,28,122,85,180,169,167,245,	0,4931,5064,5992,7010,7422,9979,11967,
#Partially deleted in new
chr3	39384431	39397012	chr3:39384431-39397012	1	+	39384687	39396520	789624	7	274,122,85,180,169,167,615,	0,5063,5991,7009,7421,9978,11966,
#Partially deleted in new
chr3	39387807	39391510	chr3:39387807-39391510	0	+	39387842	39391510	789624	5	58,28,122,85,70,	0,1554,1687,2615,3633,
#Partially deleted in new
chr3	39388369	39390509	chr3:39388369-39390509	0	+	39388369	39388369	8553170	4	102,28,122,87,	0,992,1125,2053,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	39406688	39412542	chr3:39406688-39412542	3	+	39407653	39412368	0	7	76,166,119,246,129,166,269,	0,932,1917,4065,4960,5207,5585,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	39406715	39408986	chr3:39406715-39408986	0	+	39406715	39406715	8553170	3	49,166,381,	0,905,1890,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	39406717	39408195	chr3:39406717-39408195	0	+	39406717	39406717	8553170	2	47,575,	0,903,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	39406718	39408076	chr3:39406718-39408076	0	+	39406718	39406718	8553170	2	116,456,	0,902,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	39406732	39412059	chr3:39406732-39412059	0	+	39407653	39412059	789624	6	32,184,119,246,129,164,	0,870,1873,4021,4916,5163,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	39406734	39412434	chr3:39406734-39412434	1	+	39407653	39412368	789624	7	30,166,134,246,129,166,161,	0,886,1871,4019,4914,5161,5539,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	39406762	39410849	chr3:39406762-39410849	0	+	39407653	39410849	789624	4	320,166,119,96,	0,858,1843,3991,
#Partially deleted in new
chr3	39408203	39412438	chr3:39408203-39412438	0	+	39408203	39408203	8553170	5	521,246,129,166,165,	0,2550,3445,3692,4070,
#Partially deleted in new
chr3	39408388	39408539	chr3:39408388-39408539	3	+	39408388	39408388	789624	1	151,	0,
#Deleted in new
chr3	39410258	39412434	chr3:39410258-39412434	0	+	39410258	39410258	8553170	2	1519,539,	0,1637,
#Deleted in new
chr3	39411053	39411206	chr3:39411053-39411206	3	+	39411053	39411053	789624	1	153,	0,
#Partially deleted in new
chr3	39467197	39502244	chr3:39467197-39502244	0	+	39502069	39502244	789624	4	86,218,84,179,	0,325,12842,34868,
#Partially deleted in new
chr3	39467604	39516003	chr3:39467604-39516003	1	+	39502069	39513422	789624	4	136,84,210,2621,	0,12435,34461,45778,
#Partially deleted in new
chr3	39467604	39513547	chr3:39467604-39513547	1	+	39502069	39513422	789624	4	136,66,210,165,	0,31862,34461,45778,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	39467604	39513512	chr3:39467604-39513512	1	+	39502069	39502880	789624	5	136,84,210,380,130,	0,12435,34461,34930,45778,
#Partially deleted in new
chr3	39467604	39513447	chr3:39467604-39513447	1	+	39502069	39513422	789624	5	136,84,66,210,65,	0,12435,31862,34461,45778,
#Partially deleted in new
chr3	39467604	39513602	chr3:39467604-39513602	1	+	39502069	39513422	789624	3	136,210,220,	0,34461,45778,
#Partially deleted in new
chr3	39467679	39502224	chr3:39467679-39502224	0	+	39500038	39502224	789624	5	61,84,66,201,159,	0,12360,31787,32187,34386,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	39467679	39503027	chr3:39467679-39503027	1	+	39502069	39502880	789624	4	61,66,210,493,	0,31787,34386,34855,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	39467703	39529479	chr3:39467703-39529479	0	+	39502069	39513422	789624	6	37,84,210,224,84,5036,	0,12336,34362,45679,56539,56740,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	39494836	39502567	chr3:39494836-39502567	3	-	39494836	39494836	8553170	3	908,256,115,	0,7129,7616,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	39502062	39524882	chr3:39502062-39524882	0	+	39502069	39502880	789624	5	213,380,224,84,439,	0,472,11320,22180,22381,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	39502065	39524494	chr3:39502065-39524494	0	+	39502069	39513383	789624	5	210,342,224,84,51,	0,469,11317,22177,22378,
#Partially deleted in new
chr3	39502214	39524556	chr3:39502214-39524556	0	+	39502214	39502214	8553170	5	61,224,63,84,113,	0,11168,15508,22028,22229,
#Partially deleted in new
chr3	39643637	39644705	chr3:39643637-39644705	7	+	39643637	39643637	16724991	2	114,660,	0,408,
#Partially deleted in new
chr3	39808913	40258166	chr3:39808913-40258166	1	+	39900816	40258166	789624	17	68,140,222,137,81,98,81,144,154,638,240,195,162,105,61,119,33,	0,91873,235136,342134,353816,357932,358245,361036,373306,380912,400940,424945,435532,441308,441525,442967,449220,
#Partially deleted in new
chr3	39809604	40260321	chr3:39809604-40260321	3	+	39900816	40258166	789624	17	312,140,222,137,81,98,81,144,154,638,240,195,162,105,61,119,2188,	0,91182,234445,341443,353125,357241,357554,360345,372615,380221,400249,424254,434841,440617,440834,442276,448529,
#Partially deleted in new
chr3	39809659	40260313	chr3:39809659-40260313	1	+	40044069	40258166	789624	16	257,140,222,81,98,81,144,154,638,240,195,162,105,61,119,2180,	0,91127,234390,353070,357186,357499,360290,372560,380166,400194,424199,434786,440562,440779,442221,448474,
#Partially deleted in new
chr3	39809705	40258521	chr3:39809705-40258521	1	+	39900816	40258166	789624	16	211,140,222,137,81,98,81,144,154,638,240,162,105,61,119,388,	0,91081,234344,341342,353024,357140,357453,360244,372514,380120,400148,434740,440516,440733,442175,448428,
#Partially deleted in new
chr3	39809831	40258752	chr3:39809831-40258752	0	+	39900816	40233904	789624	17	85,140,222,137,81,98,81,144,154,638,240,158,162,105,61,119,619,	0,90955,234218,341216,352898,357014,357327,360118,372388,379994,400022,424064,434614,440390,440607,442049,448302,
#Partially deleted in new
chr3	39809831	40258752	chr3:39809831-40258752	0	+	39900816	40162745	789624	16	85,140,222,81,98,81,144,154,638,240,195,162,105,61,119,619,	0,90955,234218,352898,357014,357327,360118,372388,379994,400022,424027,434614,440390,440607,442049,448302,
#Partially deleted in new
chr3	39810486	40162962	chr3:39810486-40162962	0	+	39810486	39810486	8553170	5	229,140,222,137,233,	0,90300,233563,340561,352243,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	39970124	39970266	chr3:39970124-39970266	3	+	39970124	39970124	8553170	1	142,	0,
#Partially deleted in new
chr3	40071115	40259965	chr3:40071115-40259965	0	+	40071115	40071115	8553170	15	106,137,81,98,81,144,154,638,240,195,162,105,61,119,1832,	0,79932,91614,95730,96043,98834,111104,118710,138738,162743,173330,179106,179323,180765,187018,
#Partially deleted in new
chr3	40100010	40167224	chr3:40100010-40167224	0	+	40100010	40100010	8553170	5	240,137,81,98,66,	0,51037,62719,66835,67148,
#Partially deleted in new
chr3	40100010	40260313	chr3:40100010-40260313	1	+	40166856	40258166	789624	15	240,137,81,98,81,144,154,638,240,195,162,105,61,119,2180,	0,51037,62719,66835,67148,69939,82209,89815,109843,133848,144435,150211,150428,151870,158123,
#Partially deleted in new
chr3	40173144	40309542	chr3:40173144-40309542	3	-	40173144	40173144	789624	3	1578,160,220,	0,128092,136178,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	40209004	40209304	chr3:40209004-40209304	3	+	40209004	40209004	8553170	1	300,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	40232856	40309512	chr3:40232856-40309512	0	-	40232856	40232856	8553170	3	203,160,190,	0,68380,76466,
#Partially deleted in new
chr3	40238607	40238741	chr3:40238607-40238741	3	+	40238607	40238607	8553170	1	134,	0,
#Partially deleted in new
chr3	40242194	40309698	chr3:40242194-40309698	1	-	40242194	40242194	8553170	5	292,187,288,160,376,	0,2257,5989,59042,67128,
#Partially deleted in new
chr3	40244456	40309478	chr3:40244456-40309478	0	-	40244456	40244456	8553170	3	182,160,156,	0,56780,64866,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	40289127	40309461	chr3:40289127-40309461	1	-	40289127	40289127	8553170	3	2100,160,139,	0,12109,20195,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	40309073	40309488	chr3:40309073-40309488	0	-	40309073	40309073	8553170	1	415,	0,
#Partially deleted in new
chr3	40309683	40312424	chr3:40309683-40312424	3	+	40309941	40312014	789624	4	289,164,102,455,	0,1209,1786,2286,
#Partially deleted in new
chr3	40309721	40311514	chr3:40309721-40311514	0	+	40309721	40309721	8553170	2	251,622,	0,1171,
#Partially deleted in new
chr3	40309825	40311795	chr3:40309825-40311795	0	+	40309825	40309825	8553170	3	147,164,326,	0,1067,1644,
#Partially deleted in new
chr3	40310627	40311672	chr3:40310627-40311672	0	+	40310627	40310627	8553170	2	429,203,	0,842,
#Partially deleted in new
chr3	40313801	40453186	chr3:40313801-40453186	0	-	40313801	40313801	8553170	3	396,78,65,	0,137903,139320,
#Partially deleted in new
chr3	40322714	40323279	chr3:40322714-40323279	7	-	40322714	40322714	16724991	1	565,	0,
#Partially deleted in new
chr3	40387155	40428619	chr3:40387155-40428619	3	+	40388057	40427508	789624	11	106,52,128,118,151,160,234,273,111,138,1348,	0,890,4867,13738,24656,27525,28684,35694,36135,36670,40116,
#Partially deleted in new
chr3	40387197	40428744	chr3:40387197-40428744	0	+	40388057	40400970	8553170	12	64,52,128,124,118,151,160,234,273,111,138,1473,	0,848,4825,7432,13696,24614,27483,28642,35652,36093,36628,40074,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	40387244	40400994	chr3:40387244-40400994	0	+	40388057	40400994	789624	5	147,52,128,123,101,	0,801,4778,7064,13649,
#Partially deleted in new
chr3	40387244	40427508	chr3:40387244-40427508	1	+	40388057	40427508	789624	11	147,52,128,118,151,160,234,273,111,138,237,	0,801,4778,13649,24567,27436,28595,35605,36046,36581,40027,
#Partially deleted in new
chr3	40387996	40425010	chr3:40387996-40425010	1	+	40388057	40424772	789624	10	101,128,118,151,160,234,273,111,138,244,	0,4026,12897,23815,26684,27843,34853,35294,35829,36770,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	40390950	40453305	chr3:40390950-40453305	3	-	40390950	40390950	789624	4	1619,155,78,184,	0,8523,60754,62171,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	40391849	40453180	chr3:40391849-40453180	1	-	40391849	40391849	8553170	5	316,116,155,78,59,	0,604,7624,59855,61272,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	40446342	40453329	chr3:40446342-40453329	1	-	40446342	40446342	8553170	3	505,78,208,	0,5362,6779,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	40457291	40468587	chr3:40457291-40468587	3	+	40457360	40462232	0	6	72,102,95,100,54,6649,	0,598,1350,4115,4316,4647,
#Deleted in new
chr3	40457302	40458616	chr3:40457302-40458616	0	+	40457302	40457302	8553170	2	61,727,	0,587,
#Partially deleted in new
chr3	40457339	40462368	chr3:40457339-40462368	1	+	40457471	40462232	0	6	135,102,95,100,54,430,	0,550,1302,4067,4268,4599,
#Partially deleted in new
chr3	40457353	40462280	chr3:40457353-40462280	1	+	40457471	40461961	789624	6	121,102,95,100,54,340,	0,536,1288,4053,4254,4587,
#Partially deleted in new
chr3	40457362	40462168	chr3:40457362-40462168	0	+	40457471	40457630	789624	6	385,102,95,100,54,230,	0,527,1279,4044,4245,4576,
#Partially deleted in new
chr3	40457876	40462368	chr3:40457876-40462368	0	+	40457876	40457876	8553170	5	115,95,100,54,430,	0,765,3530,3731,4062,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	40457890	40459156	chr3:40457890-40459156	0	+	40457890	40457890	8553170	2	101,515,	0,751,
#Partially deleted in new
chr3	40457931	40462132	chr3:40457931-40462132	0	+	40457931	40457931	8553170	4	60,95,255,194,	0,710,3475,4007,
#Partially deleted in new
chr3	40458630	40461470	chr3:40458630-40461470	0	+	40458630	40458630	8553170	2	106,64,	0,2776,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	40477112	40490236	chr3:40477112-40490236	1	+	40481936	40488241	789624	6	245,86,154,117,71,3431,	0,805,4750,5475,6540,9693,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	40477112	40490236	chr3:40477112-40490236	3	+	40477979	40488241	789624	6	245,86,154,120,117,3431,	0,805,4750,5117,5475,9693,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	40477130	40517529	chr3:40477130-40517529	0	+	40506352	40507935	8553170	6	227,73,99,127,114,1670,	0,29173,30712,34339,35271,38729,
#Partially deleted in new
chr3	40477141	40488578	chr3:40477141-40488578	1	+	40477957	40488241	789624	4	216,86,117,1773,	0,776,5446,9664,
#Partially deleted in new
chr3	40477141	40482128	chr3:40477141-40482128	0	+	40477141	40477141	8553170	3	216,86,266,	0,776,4721,
#Partially deleted in new
chr3	40477141	40488578	chr3:40477141-40488578	0	+	40477141	40477141	8553170	4	216,86,117,1773,	0,776,5446,9664,
#Partially deleted in new
chr3	40477183	40488433	chr3:40477183-40488433	0	+	40477979	40482201	789624	6	174,86,154,150,117,1628,	0,734,4679,5016,5404,9622,
#Partially deleted in new
chr3	40477979	40488259	chr3:40477979-40488259	1	+	40477979	40488241	789624	4	24,154,117,1454,	0,3883,4608,8826,
#Partially deleted in new
chr3	40477979	40488259	chr3:40477979-40488259	1	+	40477979	40488241	789624	5	24,154,120,117,1454,	0,3883,4250,4608,8826,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	40498890	40499003	chr3:40498890-40499003	3	-	40498890	40498890	8553170	1	113,	0,
#Partially deleted in new
chr3	40505991	40515944	chr3:40505991-40515944	0	+	40506352	40515944	789624	5	134,73,127,114,85,	0,312,5478,6410,9868,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	40506038	40518736	chr3:40506038-40518736	3	+	40506352	40516863	789624	5	100,73,127,114,2877,	0,265,5431,6363,9821,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	40506039	40517709	chr3:40506039-40517709	1	+	40515936	40516863	789624	3	99,73,1850,	0,264,9820,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	40506107	40512472	chr3:40506107-40512472	0	+	40506352	40508766	789624	5	31,73,119,127,71,	0,196,2548,5362,6294,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	40524877	40539794	chr3:40524877-40539794	1	+	40525840	40538323	789624	6	397,86,127,108,177,1509,	0,901,4441,5331,7152,13408,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	40524877	40533526	chr3:40524877-40533526	1	+	40525840	40533090	789624	5	161,86,127,108,1497,	0,901,4441,5331,7152,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	40524884	40537696	chr3:40524884-40537696	3	+	40525840	40533090	789624	5	390,86,127,108,5667,	0,894,4434,5324,7145,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	40524897	40534071	chr3:40524897-40534071	1	+	40532103	40533090	789624	4	377,86,108,2042,	0,881,5311,7132,
#Partially deleted in new
chr3	40524982	40574685	chr3:40524982-40574685	0	+	40524982	40524982	8553170	5	292,86,127,108,303,	0,796,4336,5226,49400,
#Partially deleted in new
chr3	40525005	40532257	chr3:40525005-40532257	0	+	40525005	40525005	8553170	5	33,86,81,108,228,	0,773,4489,5203,7024,
#Partially deleted in new
chr3	40525415	40532228	chr3:40525415-40532228	0	+	40525840	40532228	789624	5	45,86,127,108,199,	0,363,3903,4793,6614,
#Partially deleted in new
chr3	40529287	40532861	chr3:40529287-40532861	0	+	40529287	40529287	8553170	3	158,108,832,	0,921,2742,
#Deleted in new
chr3	40586534	40587428	chr3:40586534-40587428	7	-	40586534	40586534	16724991	1	894,	0,
#Deleted in new
chr3	40596206	40597494	chr3:40596206-40597494	7	-	40596206	40596206	16724991	1	1288,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	40603124	40605427	chr3:40603124-40605427	3	-	40603124	40603124	8553170	2	92,625,	0,1678,
#Deleted in new
chr3	40699065	40699338	chr3:40699065-40699338	7	-	40699065	40699065	16724991	1	273,	0,
#Deleted in new
chr3	40761544	40761799	chr3:40761544-40761799	7	+	40761544	40761544	16724991	1	255,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	40970540	40971578	chr3:40970540-40971578	3	-	40970540	40970540	8553170	2	324,346,	0,692,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	41162286	41168547	chr3:41162286-41168547	3	-	41162286	41162286	8553170	4	74,211,168,157,	0,764,3791,6104,
#Deleted in new
chr3	41189040	41189236	chr3:41189040-41189236	7	+	41189040	41189040	16724991	1	196,	0,
#Partially deleted in new
chr3	41194740	41239949	chr3:41194740-41239949	3	+	41224068	41239342	0	16	201,76,61,228,254,239,202,145,104,339,159,120,151,122,61,816,	0,890,29280,29785,30213,30593,30919,32467,38600,38788,39398,40983,41608,41847,43275,44393,
#Partially deleted in new
chr3	41194836	41224711	chr3:41194836-41224711	0	+	41224533	41224711	789624	5	105,79,61,132,186,	0,791,29184,29353,29689,
#Partially deleted in new
chr3	41194847	41239970	chr3:41194847-41239970	1	+	41224068	41239342	0	16	94,79,61,228,254,239,202,145,104,339,159,120,151,122,61,837,	0,780,29173,29678,30106,30486,30812,32360,38493,38681,39291,40876,41501,41740,43168,44286,
#Partially deleted in new
chr3	41194852	41239900	chr3:41194852-41239900	1	+	41224533	41239342	789624	17	89,76,61,132,228,254,239,202,145,104,339,159,120,151,122,61,767,	0,778,29168,29337,29673,30101,30481,30807,32355,38488,38676,39286,40871,41496,41735,43163,44281,
#Partially deleted in new
chr3	41194867	41239904	chr3:41194867-41239904	1	+	41224068	41239342	0	17	74,76,61,228,254,239,202,145,104,339,159,120,151,122,61,221,86,	0,763,29153,29658,30086,30466,30792,32340,38473,38661,39271,40856,41481,41720,43148,44266,44951,
#Partially deleted in new
chr3	41194892	41239900	chr3:41194892-41239900	1	+	41224068	41239342	0	17	49,79,61,228,254,239,202,145,104,339,159,120,151,122,61,221,241,	0,735,29128,29633,30061,30441,30767,32315,38448,38636,39246,40831,41456,41695,43123,44241,44767,
#Partially deleted in new
chr3	41194993	41239971	chr3:41194993-41239971	1	+	41224068	41239342	0	16	713,61,228,254,239,202,145,104,339,159,120,151,122,61,221,312,	0,29027,29532,29960,30340,30666,32214,38347,38535,39145,40730,41355,41594,43022,44140,44666,
#Partially deleted in new
chr3	41198644	41239945	chr3:41198644-41239945	1	+	41224068	41239342	0	15	137,61,228,254,239,202,145,104,339,159,120,151,122,61,812,	0,25376,25881,26309,26689,27015,28563,34696,34884,35494,37079,37704,37943,39371,40489,
#Partially deleted in new
chr3	41198678	41239899	chr3:41198678-41239899	1	+	41224068	41239342	0	16	103,61,228,254,239,202,145,104,339,159,120,151,122,61,221,240,	0,25342,25847,26275,26655,26981,28529,34662,34850,35460,37045,37670,37909,39337,40455,40981,
#Partially deleted in new
chr3	41198704	41239971	chr3:41198704-41239971	1	+	41224533	41239342	789624	16	77,61,132,228,254,239,202,145,104,339,159,120,151,122,61,838,	0,25316,25485,25821,26249,26629,26955,28503,34636,34824,35434,37019,37644,37883,39311,40429,
#Partially deleted in new
chr3	41199228	41240453	chr3:41199228-41240453	1	+	41224068	41239342	0	15	442,61,228,254,239,202,145,104,339,159,120,151,122,61,1320,	0,24792,25297,25725,26105,26431,27979,34112,34300,34910,36495,37120,37359,38787,39905,
#Partially deleted in new
chr3	41199388	41240443	chr3:41199388-41240443	1	+	41224068	41239342	0	16	282,61,228,254,239,202,145,104,339,159,120,151,122,61,221,784,	0,24632,25137,25565,25945,26271,27819,33952,34140,34750,36335,36960,37199,38627,39745,40271,
#Partially deleted in new
chr3	41199416	41239971	chr3:41199416-41239971	1	+	41224533	41239342	789624	17	254,61,132,228,38,105,239,202,145,104,339,159,120,151,122,61,838,	0,24604,24773,25109,25537,25686,25917,26243,27791,33924,34112,34722,36307,36932,37171,38599,39717,
#Partially deleted in new
chr3	41199418	41239885	chr3:41199418-41239885	1	+	41224533	41239342	789624	16	252,61,132,228,254,239,202,145,104,339,159,120,151,122,61,752,	0,24602,24771,25107,25535,25915,26241,27789,33922,34110,34720,36305,36930,37169,38597,39715,
#Partially deleted in new
chr3	41199433	41240443	chr3:41199433-41240443	1	+	41224068	41239342	0	16	237,61,228,254,239,202,145,104,339,159,120,151,122,61,221,625,	0,24587,25092,25520,25900,26226,27774,33907,34095,34705,36290,36915,37154,38582,39700,40385,
#Partially deleted in new
chr3	41199433	41240445	chr3:41199433-41240445	1	+	41224068	41239342	0	16	237,61,228,254,239,202,145,104,339,159,120,151,122,61,221,624,	0,24587,25092,25520,25900,26226,27774,33907,34095,34705,36290,36915,37154,38582,39700,40388,
#Partially deleted in new
chr3	41199441	41239955	chr3:41199441-41239955	1	+	41224068	41239342	0	16	229,61,228,254,239,202,145,104,339,159,120,151,122,61,221,143,	0,24579,25084,25512,25892,26218,27766,33899,34087,34697,36282,36907,37146,38574,39692,40371,
#Partially deleted in new
chr3	41199444	41239947	chr3:41199444-41239947	1	+	41224533	41239342	789624	17	226,61,132,228,254,239,202,145,104,339,159,120,151,122,61,221,288,	0,24576,24745,25081,25509,25889,26215,27763,33896,34084,34694,36279,36904,37143,38571,39689,40215,
#Partially deleted in new
chr3	41199469	41239947	chr3:41199469-41239947	1	+	41224533	41239342	789624	16	153,61,132,228,254,239,202,145,104,339,159,120,151,122,61,814,	0,24551,24720,25056,25484,25864,26190,27738,33871,34059,34669,36254,36879,37118,38546,39664,
#Partially deleted in new
chr3	41199469	41239675	chr3:41199469-41239675	1	+	41224533	41239342	789624	16	201,61,132,228,254,239,202,145,104,339,93,120,151,122,61,542,	0,24551,24720,25056,25484,25864,26190,27738,33871,34059,34735,36254,36879,37118,38546,39664,
#Partially deleted in new
chr3	41199471	41239743	chr3:41199471-41239743	1	+	41224533	41239342	789624	14	199,228,254,239,202,145,104,339,159,120,151,122,61,610,	0,25054,25482,25862,26188,27736,33869,34057,34667,36252,36877,37116,38544,39662,
#Partially deleted in new
chr3	41199478	41239900	chr3:41199478-41239900	1	+	41224068	41239342	0	16	192,61,228,254,239,202,145,104,339,159,120,151,122,61,221,260,	0,24542,25047,25475,25855,26181,27729,33862,34050,34660,36245,36870,37109,38537,39655,40162,
#Partially deleted in new
chr3	41199485	41239913	chr3:41199485-41239913	1	+	41224068	41239342	789624	16	185,61,228,38,105,239,202,145,104,339,159,120,151,122,61,780,	0,24535,25040,25468,25617,25848,26174,27722,33855,34043,34653,36238,36863,37102,38530,39648,
#Partially deleted in new
chr3	41199485	41239900	chr3:41199485-41239900	1	+	41224068	41239342	0	16	137,61,228,254,239,202,145,104,339,159,120,151,122,61,221,241,	0,24535,25040,25468,25848,26174,27722,33855,34043,34653,36238,36863,37102,38530,39648,40174,
#Partially deleted in new
chr3	41199486	41239955	chr3:41199486-41239955	0	+	41199486	41199486	8553170	13	184,61,228,254,239,202,145,104,2315,151,122,61,822,	0,24534,25039,25467,25847,26173,27721,33854,34042,36862,37101,38529,39647,
#Partially deleted in new
chr3	41199499	41225200	chr3:41199499-41225200	0	+	41199499	41199499	8553170	4	171,61,228,98,	0,24521,25026,25603,
#Partially deleted in new
chr3	41199504	41239954	chr3:41199504-41239954	1	+	41224068	41239342	0	17	166,12,61,228,254,239,202,145,104,339,159,120,151,122,61,221,136,	0,22829,24516,25021,25449,25829,26155,27703,33836,34024,34634,36219,36844,37083,38511,39629,40314,
#Partially deleted in new
chr3	41199504	41237196	chr3:41199504-41237196	1	+	41224068	41236742	789624	13	166,61,228,254,239,202,145,104,339,159,120,151,609,	0,24516,25021,25449,25829,26155,27703,33836,34024,34634,36219,36844,37083,
#Partially deleted in new
chr3	41199504	41239903	chr3:41199504-41239903	1	+	41224068	41239342	789624	15	166,61,234,254,239,202,145,104,339,159,120,151,122,61,770,	0,24516,25021,25449,25829,26155,27703,33836,34024,34634,36219,36844,37083,38511,39629,
#Partially deleted in new
chr3	41199504	41239904	chr3:41199504-41239904	0	+	41224068	41238381	789624	16	166,61,228,254,239,202,145,104,339,159,120,151,122,61,75,771,	0,24516,25021,25449,25829,26155,27703,33836,34024,34634,36219,36844,37083,38511,38866,39629,
#Partially deleted in new
chr3	41199524	41239904	chr3:41199524-41239904	1	+	41224533	41239342	789624	17	146,61,132,228,254,239,202,145,104,339,159,120,151,122,61,221,86,	0,24496,24665,25001,25429,25809,26135,27683,33816,34004,34614,36199,36824,37063,38491,39609,40294,
#Partially deleted in new
chr3	41199537	41239904	chr3:41199537-41239904	1	+	41224068	41239342	789624	15	133,61,228,254,239,202,145,104,339,159,117,151,122,61,771,	0,24483,24988,25416,25796,26122,27670,33803,33991,34601,36189,36811,37050,38478,39596,
#Partially deleted in new
chr3	41199602	41238271	chr3:41199602-41238271	0	+	41199602	41199602	8553170	12	68,61,228,254,239,202,145,104,2315,151,122,256,	0,24418,24923,25351,25731,26057,27605,33738,33926,36746,36985,38413,
#Partially deleted in new
chr3	41199620	41239913	chr3:41199620-41239913	1	+	41224068	41239342	0	15	122,61,228,254,239,202,145,104,339,159,120,151,122,61,780,	0,24400,24905,25333,25713,26039,27587,33720,33908,34518,36103,36728,36967,38395,39513,
#Partially deleted in new
chr3	41199635	41239950	chr3:41199635-41239950	1	+	41224068	41239342	0	17	35,12,61,228,254,239,202,145,104,339,159,120,151,122,61,221,291,	0,22698,24385,24890,25318,25698,26024,27572,33705,33893,34503,36088,36713,36952,38380,39498,40024,
#Partially deleted in new
chr3	41199700	41239905	chr3:41199700-41239905	1	+	41224533	41239342	789624	16	107,61,132,228,254,239,202,145,104,339,159,120,151,122,61,772,	0,24320,24489,24825,25253,25633,25959,27507,33640,33828,34438,36023,36648,36887,38315,39433,
#Partially deleted in new
chr3	41199712	41239912	chr3:41199712-41239912	1	+	41224068	41239342	0	17	95,12,61,228,254,239,202,145,104,339,159,120,151,122,61,221,94,	0,22621,24308,24813,25241,25621,25947,27495,33628,33816,34426,36011,36636,36875,38303,39421,40106,
#Partially deleted in new
chr3	41199735	41239900	chr3:41199735-41239900	1	+	41224068	41239342	0	16	72,12,61,228,254,239,202,145,104,339,159,120,151,122,61,767,	0,22598,24285,24790,25218,25598,25924,27472,33605,33793,34403,35988,36613,36852,38280,39398,
#Partially deleted in new
chr3	41199735	41239334	chr3:41199735-41239334	0	+	41224068	41239334	789624	15	72,61,228,254,239,202,145,104,339,159,120,151,122,61,201,	0,24285,24790,25218,25598,25924,27472,33605,33793,34403,35988,36613,36852,38280,39398,
#Partially deleted in new
chr3	41200079	41239902	chr3:41200079-41239902	1	+	41224533	41239342	789624	16	302,61,132,228,254,239,202,145,104,339,159,120,151,122,61,769,	0,23941,24110,24446,24874,25254,25580,27128,33261,33449,34059,35644,36269,36508,37936,39054,
#Partially deleted in new
chr3	41200109	41239904	chr3:41200109-41239904	0	+	41200109	41200109	8553170	14	272,61,228,254,239,202,145,527,159,120,151,122,61,771,	0,23911,24416,24844,25224,25550,27098,33231,34029,35614,36239,36478,37906,39024,
#Partially deleted in new
chr3	41200110	41239960	chr3:41200110-41239960	1	+	41224068	41239342	0	15	271,61,228,254,239,202,145,104,339,159,120,151,122,61,827,	0,23910,24415,24843,25223,25549,27097,33230,33418,34028,35613,36238,36477,37905,39023,
#Partially deleted in new
chr3	41200111	41239906	chr3:41200111-41239906	1	+	41224068	41239342	0	16	270,61,228,254,239,202,145,104,339,159,120,151,122,61,221,88,	0,23909,24414,24842,25222,25548,27096,33229,33417,34027,35612,36237,36476,37904,39022,39707,
#Partially deleted in new
chr3	41200142	41239904	chr3:41200142-41239904	1	+	41224068	41239342	0	16	239,61,228,254,239,202,145,104,339,159,120,151,122,61,221,245,	0,23878,24383,24811,25191,25517,27065,33198,33386,33996,35581,36206,36445,37873,38991,39517,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	41220550	41239888	chr3:41220550-41239888	1	+	41224068	41239342	0	15	1795,61,228,254,239,202,145,104,339,159,120,151,122,61,755,	0,3470,3975,4403,4783,5109,6657,12790,12978,13588,15173,15798,16037,17465,18583,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	41220953	41239767	chr3:41220953-41239767	1	+	41224068	41239342	0	16	1392,61,228,254,239,202,145,104,339,159,120,151,122,61,221,108,	0,3067,3572,4000,4380,4706,6254,12387,12575,13185,14770,15395,15634,17062,18180,18706,
#Partially deleted in new
chr3	41223991	41239947	chr3:41223991-41239947	0	+	41223991	41223991	8553170	13	762,254,239,202,145,104,339,159,120,151,122,61,814,	0,962,1342,1668,3216,9349,9537,10147,11732,12357,12596,14024,15142,
#Partially deleted in new
chr3	41227257	41236695	chr3:41227257-41236695	0	+	41227257	41236695	789624	7	95,104,339,159,120,151,132,	0,6083,6271,6881,8466,9091,9306,
#Deleted in new
chr3	41233193	41237436	chr3:41233193-41237436	0	+	41233193	41233193	8553170	2	251,3908,	0,335,
#Deleted in new
chr3	41233408	41237466	chr3:41233408-41237466	0	+	41233408	41233408	8553170	1	4058,	0,
#Deleted in new
chr3	41233420	41236386	chr3:41233420-41236386	0	+	41233420	41236386	789624	4	24,339,159,38,	0,108,718,2928,
#Deleted in new
chr3	41233852	41235753	chr3:41233852-41235753	0	+	41233852	41233852	8553170	2	445,30,	0,1871,
#Deleted in new
chr3	41234153	41236967	chr3:41234153-41236967	0	+	41234153	41234153	8553170	3	144,120,619,	0,1570,2195,
#Deleted in new
chr3	41235596	41237467	chr3:41235596-41237467	0	+	41235596	41235596	8553170	2	247,1119,	0,752,
#Partially deleted in new
chr3	41236452	41260096	chr3:41236452-41260096	0	+	41236452	41239342	789624	6	47,122,61,221,153,232,	0,135,1563,2681,21879,23412,
#Deleted in new
chr3	41237733	41239939	chr3:41237733-41239939	0	+	41237733	41237733	8553170	2	343,806,	0,1400,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	41246598	41278151	chr3:41246598-41278151	0	-	41246598	41246598	8553170	4	394,86,202,346,	0,2890,4324,31207,
#Partially deleted in new
chr3	41246606	41962430	chr3:41246606-41962430	3	-	41246928	41954759	789624	37	386,86,186,99,167,106,49,93,145,52,95,52,57,122,134,128,183,162,84,108,79,47,182,61,105,97,70,119,93,76,84,102,163,140,100,186,415,	0,2882,151472,208890,216480,319418,369062,417000,434901,435146,458450,458647,468630,468840,471121,507754,543054,553525,572816,589257,637267,648911,650215,651825,654118,661238,664710,664934,666200,669370,671850,673110,685237,689194,691491,708015,715409,
#Partially deleted in new
chr3	41687867	41688033	chr3:41687867-41688033	3	-	41687867	41687867	8553170	1	166,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	41766614	41766919	chr3:41766614-41766919	3	-	41766614	41766614	8553170	1	305,	0,
#Partially deleted in new
chr3	41800132	41854911	chr3:41800132-41854911	0	-	41800132	41800132	8553170	5	161,84,108,95,42,	0,19290,35731,53949,54737,
#Partially deleted in new
chr3	41859349	41859594	chr3:41859349-41859594	7	-	41859349	41859349	16724991	1	245,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	41868997	41869095	chr3:41868997-41869095	3	-	41868997	41868997	8553170	1	98,	0,
#Partially deleted in new
chr3	41882149	41961994	chr3:41882149-41961994	1	-	41882193	41954759	789624	18	131,79,47,182,61,105,97,70,119,93,76,84,102,163,140,100,186,69,	0,1724,13368,14672,16282,18575,25695,29167,29391,30657,33827,36307,37567,49694,53651,55948,72472,79776,
#Deleted in new
chr3	41899110	41899253	chr3:41899110-41899253	3	-	41899110	41899110	8553170	1	143,	0,
#Partially deleted in new
chr3	41911551	41913204	chr3:41911551-41913204	0	-	41911551	41911551	8553170	2	108,398,	0,1255,
#Partially deleted in new
chr3	41919719	41962077	chr3:41919719-41962077	0	-	41919719	41919719	8553170	5	99,163,140,100,62,	0,12124,16081,18378,42296,
#Partially deleted in new
chr3	41931750	41954798	chr3:41931750-41954798	0	-	41931750	41931750	8553170	4	256,140,100,177,	0,4050,6347,22871,
#Partially deleted in new
chr3	41935861	41962115	chr3:41935861-41962115	0	-	41937323	41954759	789624	5	79,112,100,186,100,	0,1367,2236,18760,26154,
#Partially deleted in new
chr3	41935894	41962102	chr3:41935894-41962102	0	-	41937323	41954759	789624	5	46,46,100,186,87,	0,1400,2203,18727,26121,
#Partially deleted in new
chr3	41937094	41962130	chr3:41937094-41962130	1	-	41937323	41954759	789624	4	246,100,186,115,	0,1003,17527,24921,
#Partially deleted in new
chr3	41937858	41962055	chr3:41937858-41962055	0	-	41937858	41937858	8553170	3	339,186,40,	0,16763,24157,
#Partially deleted in new
chr3	41955444	41955763	chr3:41955444-41955763	7	+	41955444	41955444	16724991	1	319,	0,
#Partially deleted in new
chr3	41977007	41978034	chr3:41977007-41978034	7	+	41977007	41977007	16724991	2	215,500,	0,527,
#Partially deleted in new
chr3	42013801	42225889	chr3:42013801-42225889	1	+	42176839	42223737	789624	17	316,297,195,77,117,101,109,79,131,75,138,77,237,317,219,103,2948,	0,73302,111618,163012,170883,174243,175214,177756,179273,180022,181002,185375,187016,188634,195965,205692,209140,
#Deleted in new
chr3	42051180	42051694	chr3:42051180-42051694	7	-	42051180	42051180	16724991	1	514,	0,
#Partially deleted in new
chr3	42087199	42202906	chr3:42087199-42202906	1	+	42176839	42202901	789624	13	201,195,77,117,101,109,79,131,75,138,77,237,471,	0,38220,89614,97485,100845,101816,104358,105875,106624,107604,111977,113618,115236,
#Partially deleted in new
chr3	42091069	42225768	chr3:42091069-42225768	3	+	42091469	42223737	789624	16	491,195,77,117,101,109,79,131,75,138,77,237,317,219,103,2827,	0,34350,85744,93615,96975,97946,100488,102005,102754,103734,108107,109748,111366,118697,128424,131872,
#Deleted in new
chr3	42145645	42146371	chr3:42145645-42146371	7	-	42145645	42145645	16724991	1	726,	0,
#Partially deleted in new
chr3	42149234	42204189	chr3:42149234-42204189	1	+	42149535	42202901	789624	12	365,77,117,101,109,79,131,75,138,77,237,1754,	0,27579,35450,38810,39781,42323,43840,44589,45569,49942,51583,53201,
#Partially deleted in new
chr3	42149234	42212615	chr3:42149234-42212615	1	+	42149535	42210257	789624	13	365,77,117,101,109,79,131,75,138,77,237,317,2849,	0,27579,35450,38810,39781,42323,43840,44589,45569,49942,51583,53201,60532,
#Partially deleted in new
chr3	42149358	42184757	chr3:42149358-42184757	0	+	42149535	42151405	789624	4	241,98,77,73,	0,1976,27455,35326,
#Partially deleted in new
chr3	42160168	42212623	chr3:42160168-42212623	1	+	42160361	42210257	789624	13	305,77,117,101,109,79,131,75,138,77,237,317,2857,	0,16645,24516,27876,28847,31389,32906,33655,34635,39008,40649,42267,49598,
#Partially deleted in new
chr3	42160168	42225889	chr3:42160168-42225889	1	+	42160361	42223737	789624	15	305,77,117,101,109,79,131,75,138,77,237,317,219,103,2948,	0,16645,24516,27876,28847,31389,32906,33655,34635,39008,40649,42267,49598,59325,62773,
#Partially deleted in new
chr3	42160211	42184923	chr3:42160211-42184923	0	+	42160211	42160211	8553170	3	262,77,239,	0,16602,24473,
#Partially deleted in new
chr3	42193076	42202754	chr3:42193076-42202754	0	+	42193076	42202754	789624	5	129,138,77,237,319,	0,1727,6100,7741,9359,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	42221839	42221965	chr3:42221839-42221965	3	+	42221839	42221839	8553170	1	126,	0,
#Partially deleted in new
chr3	42257824	42264903	chr3:42257824-42264903	1	-	42258097	42263630	789624	3	407,216,207,	0,5592,6872,
#Partially deleted in new
chr3	42257824	42266207	chr3:42257824-42266207	3	-	42258097	42263630	789624	5	407,216,211,169,524,	0,5592,6872,7444,7859,
#Partially deleted in new
chr3	42257825	42263947	chr3:42257825-42263947	1	-	42258097	42263630	789624	3	406,216,125,	0,5591,5997,
#Deleted in new
chr3	42262983	42264765	chr3:42262983-42264765	0	-	42262983	42262983	8553170	2	649,69,	0,1713,
#Deleted in new
chr3	42264988	42266390	chr3:42264988-42266390	3	+	42264988	42264988	8553170	1	1402,	0,
#Deleted in new
chr3	42321004	42322695	chr3:42321004-42322695	7	+	42321004	42321004	16724991	1	1691,	0,
#Deleted in new
chr3	42340587	42342367	chr3:42340587-42342367	7	+	42340587	42340587	16724991	1	1780,	0,
#Partially deleted in new
chr3	42397077	42410600	chr3:42397077-42410600	3	-	42397264	42407251	789624	5	257,79,153,231,184,	0,6968,9768,10035,13339,
#Partially deleted in new
chr3	42397082	42410558	chr3:42397082-42410558	1	-	42397264	42407251	789624	5	252,79,153,212,142,	0,6963,9763,10030,13334,
#Partially deleted in new
chr3	42397096	42407508	chr3:42397096-42407508	0	-	42397096	42397096	8553170	5	238,79,153,60,109,	0,6949,9749,10016,10303,
#Deleted in new
chr3	42469639	42469879	chr3:42469639-42469879	7	+	42469639	42469639	16724991	1	240,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	42489298	42537567	chr3:42489298-42537567	1	+	42513793	42536281	0	14	380,199,106,108,107,104,133,154,61,67,92,130,42,1478,	0,23452,24450,29924,36588,38094,38692,41480,42172,42504,42943,45676,46044,46791,
#Partially deleted in new
chr3	42489479	42500416	chr3:42489479-42500416	0	+	42489479	42489479	8553170	2	199,373,	0,10564,
#Partially deleted in new
chr3	42489482	42500146	chr3:42489482-42500146	0	+	42489482	42489482	8553170	3	196,203,103,	0,2845,10561,
#Partially deleted in new
chr3	42489493	42519314	chr3:42489493-42519314	0	+	42489493	42489493	8553170	3	185,106,92,	0,24255,29729,
#Partially deleted in new
chr3	42501911	42527496	chr3:42501911-42527496	0	+	42513793	42527496	789624	5	318,106,108,107,104,	0,11837,17311,23975,25481,
#Partially deleted in new
chr3	42502611	42532310	chr3:42502611-42532310	0	+	42502735	42519282	789624	9	202,108,107,101,133,154,61,67,69,	0,16611,23275,24784,25379,28167,28859,29191,29630,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	42502611	42537573	chr3:42502611-42537573	1	+	42525967	42536281	0	10	202,108,107,134,61,67,92,130,42,1484,	0,16611,23275,28167,28859,29191,29630,32363,32731,33478,
#Partially deleted in new
chr3	42502611	42536394	chr3:42502611-42536394	0	+	42502735	42519282	789624	12	202,108,107,104,133,154,61,67,92,130,42,305,	0,16611,23275,24781,25379,28167,28859,29191,29630,32363,32731,33478,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	42502611	42537573	chr3:42502611-42537573	1	+	42502770	42536281	0	12	202,108,107,101,133,154,61,67,92,130,42,1484,	0,16611,23275,24784,25379,28167,28859,29191,29630,32363,32731,33478,
#Partially deleted in new
chr3	42502616	42536544	chr3:42502616-42536544	0	+	42502735	42519282	789624	10	197,108,107,134,61,67,92,130,42,455,	0,16606,23270,28162,28854,29186,29625,32358,32726,33473,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr3	42502622	42537567	chr3:42502622-42537567	3	+	42502735	42536281	0	13	191,106,108,107,104,133,154,61,67,92,130,42,1478,	0,11126,16600,23264,24770,25368,28156,28848,29180,29619,32352,32720,33467,
#Partially deleted in new
chr3	42502622	42530932	chr3:42502622-42530932	0	+	42502735	42530932	789624	6	191,106,108,107,104,154,	0,11126,16600,23264,24770,28156,
#Partially deleted in new
chr3	42502663	42532333	chr3:42502663-42532333	0	+	42502735	42519282	789624	8	150,108,107,104,133,61,67,92,	0,16559,23223,24729,25327,28807,29139,29578,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	42506464	42532062	chr3:42506464-42532062	0	-	42506464	42506464	8553170	6	378,195,55,110,99,42,	0,5250,10317,22084,24395,25556,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	42506522	42530948	chr3:42506522-42530948	0	-	42506522	42506522	8553170	3	320,143,89,	0,5535,24337,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	42506523	42532062	chr3:42506523-42532062	0	-	42506523	42506523	8553170	5	319,124,195,106,42,	0,2288,5191,22025,25497,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	42506527	42530920	chr3:42506527-42530920	0	-	42506527	42506527	8553170	4	315,55,110,61,	0,10254,22021,24332,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	42506546	42532062	chr3:42506546-42532062	0	-	42506546	42506546	8553170	8	296,235,55,89,59,101,110,42,	0,5511,10235,12704,14767,14930,22002,25474,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	42506548	42532062	chr3:42506548-42532062	0	-	42506548	42506548	8553170	5	294,254,59,110,42,	0,5509,14765,22000,25472,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	42506649	42533231	chr3:42506649-42533231	3	-	42506649	42506649	8553170	7	193,235,55,110,99,75,668,	0,5408,10132,21899,24210,25371,25914,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	42506691	42532062	chr3:42506691-42532062	0	-	42506691	42506691	8553170	7	151,254,55,89,59,110,42,	0,5366,10090,12559,14622,21857,25329,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	42506708	42511757	chr3:42506708-42511757	1	-	42506708	42506708	8553170	5	134,114,124,187,43,	0,1184,2103,2476,5006,
#Partially deleted in new
chr3	42506975	42532062	chr3:42506975-42532062	0	-	42506975	42506975	8553170	3	320,110,42,	0,21573,25045,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	42507085	42532062	chr3:42507085-42532062	0	-	42507085	42507085	8553170	6	210,254,55,89,59,42,	0,4972,9696,12165,14228,24935,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	42509182	42530948	chr3:42509182-42530948	0	-	42509182	42509182	8553170	5	168,254,55,110,28,	0,2875,7599,19366,21738,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	42509200	42528583	chr3:42509200-42528583	1	-	42509200	42509200	8553170	4	171,254,55,35,	0,2857,7581,19348,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	42509304	42532062	chr3:42509304-42532062	0	-	42509304	42509304	8553170	7	75,195,254,55,89,59,42,	0,2410,2753,7477,9946,12009,22716,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	42509724	42516818	chr3:42509724-42516818	1	-	42509724	42509724	8553170	4	31,129,254,37,	0,1990,2333,7057,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	42511959	42532057	chr3:42511959-42532057	0	-	42511959	42511959	8553170	5	352,55,110,99,37,	0,4822,16589,18900,20061,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	42511964	42530948	chr3:42511964-42530948	0	-	42511964	42511964	8553170	4	347,55,106,89,	0,4817,16584,18895,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	42512093	42532062	chr3:42512093-42532062	0	-	42512093	42512093	8553170	7	218,55,64,59,110,99,42,	0,4688,7295,9220,16455,18766,19927,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	42512137	42532056	chr3:42512137-42532056	0	-	42512137	42512137	8553170	8	174,55,89,59,110,26,99,36,	0,4644,7113,9176,16411,18439,18722,19883,
#Partially deleted in new
chr3	42512177	42532062	chr3:42512177-42532062	0	-	42512177	42512177	8553170	5	115,59,101,110,42,	0,9136,9299,16371,19843,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	42512183	42532062	chr3:42512183-42532062	0	-	42512183	42512183	8553170	7	109,55,89,59,110,99,42,	0,4598,7067,9130,16365,18676,19837,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	42512207	42530948	chr3:42512207-42530948	0	-	42512207	42512207	8553170	4	104,35,144,89,	0,4574,16307,18652,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	42513326	42532062	chr3:42513326-42532062	0	-	42513326	42513326	8553170	4	509,55,110,42,	0,3455,15222,18694,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	42513603	42532062	chr3:42513603-42532062	0	-	42513603	42513603	8553170	8	232,55,89,59,101,56,99,42,	0,3178,5647,7710,7873,14999,17256,18417,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	42513604	42532062	chr3:42513604-42532062	0	-	42513604	42513604	8553170	7	231,55,89,59,110,99,42,	0,3177,5646,7709,14944,17255,18416,
#Partially deleted in new
chr3	42513798	42527899	chr3:42513798-42527899	0	+	42513798	42513798	8553170	4	56,108,107,507,	0,5424,12088,13594,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	42516544	42532062	chr3:42516544-42532062	0	-	42516544	42516544	8553170	6	114,55,121,59,110,42,	0,237,2844,4769,12004,15476,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	42516630	42532056	chr3:42516630-42532056	0	-	42516630	42516630	8553170	7	206,89,59,101,110,99,36,	0,2620,4683,4846,11918,14229,15390,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	42516726	42532062	chr3:42516726-42532062	0	-	42516726	42516726	8553170	7	110,140,59,101,110,193,42,	0,2524,4587,4750,11822,14133,15294,
#Partially deleted in new
chr3	42527652	42530897	chr3:42527652-42530897	0	+	42527652	42527652	8553170	2	471,119,	0,3126,
#Partially deleted in new
chr3	42528414	42532062	chr3:42528414-42532062	0	-	42528414	42528414	8553170	3	244,99,42,	0,2445,3606,
#Deleted in new
chr3	42529733	42531526	chr3:42529733-42531526	0	+	42529733	42529733	8553170	3	518,154,56,	0,1045,1737,
#Deleted in new
chr3	42530121	42532062	chr3:42530121-42532062	0	-	42530121	42530121	8553170	3	481,99,42,	0,738,1899,
#Deleted in new
chr3	42530676	42532062	chr3:42530676-42532062	0	-	42530676	42530676	8553170	2	467,42,	0,1344,
#Deleted in new
chr3	42530714	42532062	chr3:42530714-42532062	0	-	42530714	42530714	8553170	2	611,42,	0,1306,
#Deleted in new
chr3	42532020	42533258	chr3:42532020-42533258	0	-	42532020	42532020	8553170	3	75,150,80,	0,543,1158,
#Deleted in new
chr3	42532028	42533257	chr3:42532028-42533257	0	-	42532028	42532028	8553170	3	67,105,79,	0,535,1150,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	42532865	42537567	chr3:42532865-42537567	0	+	42532865	42532865	8553170	3	2239,42,1478,	0,2477,3224,
#Partially deleted in new
chr3	42547968	42581942	chr3:42547968-42581942	1	-	42548615	42569046	789624	6	689,119,180,164,209,97,	0,9609,13148,15554,20896,33877,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	42547968	42563632	chr3:42547968-42563632	0	-	42553247	42563632	789624	5	5480,66,119,180,110,	0,7961,9609,13148,15554,
#Partially deleted in new
chr3	42547970	42582028	chr3:42547970-42582028	1	-	42548615	42569046	789624	7	687,66,119,180,164,209,183,	0,7959,9607,13146,15552,20894,33875,
#Partially deleted in new
chr3	42548003	42601080	chr3:42548003-42601080	1	-	42548615	42569046	789624	7	654,66,119,180,164,209,121,	0,7926,9574,13113,15519,20861,52956,
#Partially deleted in new
chr3	42548182	42581962	chr3:42548182-42581962	0	-	42563552	42569046	789624	8	475,66,119,180,164,116,209,117,	0,7747,9395,12934,15340,15582,20682,33663,
#Partially deleted in new
chr3	42552923	42581962	chr3:42552923-42581962	3	-	42553247	42569046	789624	7	525,66,119,180,164,209,117,	0,3006,4654,8193,10599,15941,28922,
#Partially deleted in new
chr3	42555930	42582327	chr3:42555930-42582327	0	-	42555930	42569046	789624	6	65,119,180,164,209,135,	0,1647,5186,7592,12934,26262,
#Partially deleted in new
chr3	42561114	42581901	chr3:42561114-42581901	0	-	42561114	42561114	8553170	5	182,164,216,209,56,	0,2408,2650,7750,20731,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	42561116	42581951	chr3:42561116-42581951	0	-	42566799	42569046	789624	5	180,164,93,209,106,	0,2406,5627,7748,20729,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	42561214	42600524	chr3:42561214-42600524	0	-	42561214	42569046	789624	5	82,164,209,152,114,	0,2308,7650,26196,39196,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	42563523	42581987	chr3:42563523-42581987	0	-	42566799	42569046	789624	5	163,216,93,209,142,	0,241,3220,5341,18322,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	42563544	42581950	chr3:42563544-42581950	0	-	42565879	42569046	789624	5	142,216,108,209,105,	0,220,2231,5320,18301,
#Partially deleted in new
chr3	42563546	42581960	chr3:42563546-42581960	0	-	42563546	42569046	789624	4	140,209,63,115,	0,5318,16896,18299,
#Deleted in new
chr3	42563608	42564415	chr3:42563608-42564415	0	-	42563608	42563608	8553170	2	78,651,	0,156,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	42563844	42581943	chr3:42563844-42581943	0	-	42563844	42569046	789624	5	44,209,148,54,98,	0,5020,9555,17467,18001,
#Partially deleted in new
chr3	42581839	42595114	chr3:42581839-42595114	3	+	42590897	42594509	789624	4	119,158,77,693,	0,8969,9685,12582,
#Partially deleted in new
chr3	42590837	42594996	chr3:42590837-42594996	1	+	42590897	42594509	789624	3	129,77,575,	0,687,3584,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	42591273	42594660	chr3:42591273-42594660	0	+	42591273	42591273	8553170	2	328,239,	0,3148,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	42600613	42648741	chr3:42600613-42648741	3	+	42601006	42645975	0	17	165,81,75,108,45,88,30,146,223,156,88,146,2883,96,57,102,2854,	0,370,16956,18406,19050,20815,29932,30557,31987,32966,33999,34607,36254,41887,42725,43288,45274,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	42600654	42638226	chr3:42600654-42638226	0	+	42600654	42600654	8553170	12	124,81,75,689,1501,3376,146,223,156,88,146,1359,	0,329,16915,18365,19361,26545,30516,31946,32925,33958,34566,36213,
#Partially deleted in new
chr3	42600659	42611184	chr3:42600659-42611184	0	+	42600659	42600659	8553170	3	119,81,82,	0,324,10443,
#Partially deleted in new
chr3	42600671	42627310	chr3:42600671-42627310	0	+	42600671	42600671	8553170	6	107,81,75,108,1853,111,	0,312,16898,18348,18992,26528,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr3	42600681	42648735	chr3:42600681-42648735	0	+	42601006	42621432	789624	19	97,81,75,108,45,28,88,28,30,146,223,156,88,146,2883,96,57,102,2848,	0,302,16888,18338,18982,19334,20747,26518,29864,30489,31919,32898,33931,34539,36186,41819,42657,43220,45206,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr3	42600685	42648733	chr3:42600685-42648733	1	+	42633706	42645975	789624	18	93,81,75,108,60,101,28,30,146,223,156,88,146,2883,96,57,102,2846,	0,298,16884,18334,18978,20730,26514,29860,30485,31915,32894,33927,34535,36182,41815,42653,43216,45202,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	42600717	42603056	chr3:42600717-42603056	0	+	42600717	42600717	8553170	2	61,2073,	0,266,
#Partially deleted in new
chr3	42600742	42620316	chr3:42600742-42620316	1	+	42601006	42620047	789624	6	36,81,75,108,45,301,	0,241,16827,18277,18921,19273,
#Partially deleted in new
chr3	42600760	42620043	chr3:42600760-42620043	0	+	42601006	42620043	789624	5	304,75,108,45,28,	0,16809,18259,18903,19255,
#Partially deleted in new
chr3	42600979	42627468	chr3:42600979-42627468	0	+	42600979	42600979	8553170	7	85,75,108,45,28,88,269,	0,16590,18040,18684,19036,20449,26220,
#Partially deleted in new
chr3	42601962	42654388	chr3:42601962-42654388	3	-	42601962	42601962	8553170	5	135,76,49,67,395,	0,10329,21801,30666,52031,
#Partially deleted in new
chr3	42612289	42654388	chr3:42612289-42654388	0	-	42612289	42612289	8553170	2	78,395,	0,41704,
#Partially deleted in new
chr3	42619818	42638219	chr3:42619818-42638219	0	+	42619818	42619818	8553170	8	1698,30,146,223,156,88,146,1352,	0,10727,11352,12782,13761,14794,15402,17049,
#Partially deleted in new
chr3	42621004	42631316	chr3:42621004-42631316	0	+	42621004	42621004	8553170	4	512,28,30,146,	0,6195,9541,10166,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	42627185	42637035	chr3:42627185-42637035	0	+	42627185	42627185	8553170	6	4131,223,156,88,146,168,	0,5415,6394,7427,8035,9682,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	42631032	42633112	chr3:42631032-42633112	0	+	42631032	42631032	8553170	2	284,512,	0,1568,
#Partially deleted in new
chr3	42632567	42654326	chr3:42632567-42654326	0	-	42632567	42632567	8553170	2	128,333,	0,21426,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	42633208	42637000	chr3:42633208-42637000	0	+	42633208	42633208	8553170	4	527,88,146,133,	0,1404,2012,3659,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	42633208	42635481	chr3:42633208-42635481	0	+	42633208	42633208	8553170	3	527,88,261,	0,1404,2012,
#Deleted in new
chr3	42633636	42635057	chr3:42633636-42635057	0	+	42633636	42633636	8553170	2	99,445,	0,976,
#Partially deleted in new
chr3	42635079	42637156	chr3:42635079-42637156	0	+	42635079	42635079	8553170	2	287,289,	0,1788,
#Partially deleted in new
chr3	42643651	42646116	chr3:42643651-42646116	0	+	42643651	42643651	8553170	2	352,229,	0,2236,
#Partially deleted in new
chr3	42653683	42665854	chr3:42653683-42665854	3	+	42658355	42664598	789624	6	200,1554,148,116,145,1618,	0,4591,7801,9328,10113,10553,
#Deleted in new
chr3	42658813	42665854	chr3:42658813-42665854	1	+	42659717	42664598	789624	7	34,203,192,148,116,145,1618,	0,222,823,2671,4198,4983,5423,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	42676188	42676491	chr3:42676188-42676491	3	-	42676188	42676188	8553170	1	303,	0,
#Partially deleted in new
chr3	42685518	42692544	chr3:42685518-42692544	3	+	42685618	42691993	0	6	1252,161,108,186,147,663,	0,2623,3091,3350,5340,6363,
#Partially deleted in new
chr3	42692662	42701521	chr3:42692662-42701521	1	-	42692750	42700826	789624	13	213,142,202,36,145,172,210,195,114,68,119,79,55,	0,414,954,4179,4338,4845,5479,6045,6369,7095,8058,8449,8804,
#Partially deleted in new
chr3	42692662	42697099	chr3:42692662-42697099	0	-	42692750	42697099	789624	4	213,113,36,99,	0,414,4179,4338,
#Partially deleted in new
chr3	42692662	42702827	chr3:42692662-42702827	3	-	42692750	42700826	789624	12	213,142,202,36,145,172,210,195,114,68,119,249,	0,414,954,4179,4338,4845,5479,6045,6369,7095,8058,9916,
#Deleted in new
chr3	42692662	42693963	chr3:42692662-42693963	0	-	42692662	42692662	8553170	3	213,142,347,	0,414,954,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	42692662	42714126	chr3:42692662-42714126	3	-	42692662	42692662	8553170	3	213,155,200,	0,20499,21264,
#Deleted in new
chr3	42692662	42693450	chr3:42692662-42693450	0	-	42692662	42692662	8553170	2	213,374,	0,414,
#Deleted in new
chr3	42693099	42694201	chr3:42693099-42694201	0	-	42693099	42693099	8553170	2	119,585,	0,517,
#Deleted in new
chr3	42697032	42702778	chr3:42697032-42702778	0	-	42697032	42700826	789624	7	113,172,210,114,68,119,200,	0,475,1109,1999,2725,3688,5546,
#Deleted in new
chr3	42698140	42702824	chr3:42698140-42702824	0	-	42698140	42700826	789624	6	211,195,114,68,119,208,	0,567,891,1617,2580,4476,
#Deleted in new
chr3	42698223	42701197	chr3:42698223-42701197	0	-	42698223	42700826	789624	6	128,195,114,68,119,66,	0,484,808,1534,2497,2908,
#Deleted in new
chr3	42698290	42702644	chr3:42698290-42702644	0	-	42698290	42700826	789624	6	61,114,68,119,59,66,	0,741,1467,2430,2841,4288,
#Partially deleted in new
chr3	42698707	42732922	chr3:42698707-42732922	0	-	42698707	42698707	8553170	3	195,155,36,	0,14454,34179,
#Deleted in new
chr3	42698837	42702644	chr3:42698837-42702644	0	-	42698837	42700826	789624	6	65,114,68,119,59,66,	0,194,920,1883,2294,3741,
#Deleted in new
chr3	42699052	42701521	chr3:42699052-42701521	0	-	42699052	42699052	8553170	4	93,68,119,410,	0,705,1668,2059,
#Deleted in new
chr3	42702652	42704628	chr3:42702652-42704628	3	+	42702652	42702652	8553170	2	77,480,	0,1496,
#Deleted in new
chr3	42702710	42706776	chr3:42702710-42706776	0	+	42702710	42702710	8553170	3	19,84,730,	0,1438,3336,
#Deleted in new
chr3	42704153	42704953	chr3:42704153-42704953	0	+	42704153	42704153	8553170	2	79,44,	0,756,
#Partially deleted in new
chr3	42705755	42804493	chr3:42705755-42804493	3	-	42708979	42794219	8553170	17	3384,115,155,123,84,140,207,177,162,105,117,90,143,149,227,119,58,	0,3928,7406,24711,27131,27714,29951,33878,37140,40167,41501,46180,46819,51310,52369,88401,98680,
#Partially deleted in new
chr3	42708268	42773253	chr3:42708268-42773253	3	-	42708979	42758345	789624	16	871,115,155,123,84,140,207,177,162,105,117,90,143,149,227,78,	0,1415,4893,22198,24618,25201,27438,31365,34627,37654,38988,43667,44306,48797,49856,64907,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	42709697	42714149	chr3:42709697-42714149	0	-	42709697	42709697	8553170	3	101,155,223,	0,3464,4229,
#Partially deleted in new
chr3	42713161	42733544	chr3:42713161-42733544	0	-	42713161	42713161	8553170	3	155,84,75,	0,19725,20308,
#Partially deleted in new
chr3	42732574	42745158	chr3:42732574-42745158	1	+	42732574	42732574	789624	4	84,113,141,216,	0,8400,10351,12368,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	42732576	42746768	chr3:42732576-42746768	3	+	42732576	42732576	8553170	3	82,141,1826,	0,10349,12366,
#Partially deleted in new
chr3	42745734	42757120	chr3:42745734-42757120	0	-	42745734	42745734	8553170	5	293,117,90,143,55,	0,1522,6201,6840,11331,
#Partially deleted in new
chr3	42746793	42773253	chr3:42746793-42773253	0	-	42746793	42746793	8553170	6	580,90,143,149,227,78,	0,5142,5781,10272,11331,26382,
#Partially deleted in new
chr3	42749814	42773243	chr3:42749814-42773243	0	-	42749814	42749814	8553170	6	144,90,143,149,227,68,	0,2121,2760,7251,8310,23361,
#Partially deleted in new
chr3	42757176	42804518	chr3:42757176-42804518	0	-	42758331	42794253	789624	5	38,227,135,119,83,	0,948,28851,36980,47259,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	42770611	42773635	chr3:42770611-42773635	3	+	42770611	42770611	789624	2	466,431,	0,2593,
#Partially deleted in new
chr3	42784297	42804531	chr3:42784297-42804531	3	-	42785270	42794253	0	4	1023,135,119,96,	0,1730,9859,20138,
#Partially deleted in new
chr3	42784329	42804488	chr3:42784329-42804488	1	-	42785270	42794253	0	4	991,135,143,53,	0,1698,9827,20106,
#Partially deleted in new
chr3	42784525	42804488	chr3:42784525-42804488	0	-	42784525	42784525	8553170	3	795,135,53,	0,1502,19910,
#Partially deleted in new
chr3	42784904	42804490	chr3:42784904-42804490	1	-	42785277	42794253	789624	4	432,135,119,55,	0,1123,9252,19531,
#Partially deleted in new
chr3	42785086	42852425	chr3:42785086-42852425	0	-	42785086	42785086	8553170	4	234,135,119,51,	0,941,9070,67288,
#Partially deleted in new
chr3	42785251	42804433	chr3:42785251-42804433	1	-	42785270	42804191	0	4	69,135,119,262,	0,776,8905,18920,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	42804939	42852428	chr3:42804939-42852428	0	-	42804939	42804939	8553170	2	698,54,	0,47435,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	42809444	42908105	chr3:42809444-42908105	0	+	42809444	42809444	8553170	4	88,81,186,84,	0,10186,29649,98577,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	42809445	43032335	chr3:42809445-43032335	0	+	42809445	42809445	8553170	6	87,81,82,127,114,69,	0,10185,129404,131780,132512,222821,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	42809455	42887640	chr3:42809455-42887640	0	+	42809455	42809455	8553170	3	77,394,103,	0,55010,78082,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	42809461	42887974	chr3:42809461-42887974	0	+	42809461	42809461	8553170	4	71,81,394,437,	0,10169,55004,78076,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	42809471	42867283	chr3:42809471-42867283	3	+	42864502	42865657	789624	2	61,2818,	0,54994,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	42809471	42900336	chr3:42809471-42900336	3	+	42809471	42809471	8553170	4	61,81,164,3299,	0,10159,78066,87566,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	42809475	42867283	chr3:42809475-42867283	1	+	42864502	42865657	789624	3	57,81,2818,	0,10155,54990,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	42809475	42843987	chr3:42809475-42843987	0	+	42809475	42809475	8553170	4	57,186,233,69,	0,29618,32062,34443,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	42809482	42942792	chr3:42809482-42942792	3	+	42938895	42942647	789624	7	50,81,117,82,127,114,255,	0,10148,99310,129367,131743,132475,133055,
#Partially deleted in new
chr3	42835243	42852425	chr3:42835243-42852425	3	-	42835243	42835243	8553170	2	716,51,	0,17131,
#Partially deleted in new
chr3	42843963	42864930	chr3:42843963-42864930	0	+	42864502	42864930	789624	2	102,465,	0,20502,
#Partially deleted in new
chr3	42850965	42865013	chr3:42850965-42865013	0	+	42864502	42865013	789624	3	90,159,548,	0,330,13500,
#Partially deleted in new
chr3	42856004	42875898	chr3:42856004-42875898	1	-	42856327	42875816	789624	2	467,1429,	0,18465,
#Partially deleted in new
chr3	42856036	42865201	chr3:42856036-42865201	0	+	42864502	42865201	789624	2	142,736,	0,8429,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	42872191	42876165	chr3:42872191-42876165	3	-	42874310	42875816	789624	1	3974,	0,
#Deleted in new
chr3	42889360	42890306	chr3:42889360-42890306	7	+	42889360	42889360	16724991	1	946,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	42905730	42917641	chr3:42905730-42917641	1	+	42908114	42915354	789624	5	438,127,117,102,3315,	0,2291,3062,7470,8596,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	42906165	42916995	chr3:42906165-42916995	3	+	42906351	42915354	789624	4	276,127,114,2669,	0,1856,2630,8161,
#Partially deleted in new
chr3	42906173	42915370	chr3:42906173-42915370	0	+	42906173	42906173	8553170	3	268,888,1044,	0,1848,8153,
#Partially deleted in new
chr3	42908021	42917640	chr3:42908021-42917640	1	+	42908114	42917618	789624	3	127,117,192,	0,771,9427,
#Partially deleted in new
chr3	42908801	42913303	chr3:42908801-42913303	0	+	42908801	42908801	8553170	3	108,53,103,	0,3215,4399,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	42934251	42936785	chr3:42934251-42936785	3	-	42934251	42934251	789624	2	1105,1029,	0,1505,
#Partially deleted in new
chr3	42936341	43032547	chr3:42936341-43032547	0	+	42936341	42936341	8553170	5	114,82,127,114,281,	0,2508,4884,5616,95925,
#Deleted in new
chr3	42936359	42942792	chr3:42936359-42942792	1	+	42938895	42942647	789624	5	96,82,127,114,255,	0,2490,4866,5598,6178,
#Partially deleted in new
chr3	42936391	43055871	chr3:42936391-43055871	3	+	42938895	43053564	8553170	6	64,82,127,114,123,440,	0,2458,4834,5566,117129,119040,
#Partially deleted in new
chr3	42936858	43032292	chr3:42936858-43032292	0	+	42938895	43032292	789624	5	205,82,127,114,26,	0,1991,4367,5099,95408,
#Deleted in new
chr3	42936861	42942792	chr3:42936861-42942792	1	+	42938895	42942647	789624	4	2070,127,114,255,	0,4364,5096,5676,
#Deleted in new
chr3	42941192	42942789	chr3:42941192-42942789	0	+	42941192	42941192	8553170	3	160,114,252,	0,765,1345,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	42979266	43060211	chr3:42979266-43060211	0	+	42979642	43056386	789624	6	379,1287,123,104,357,378,	0,53000,74254,76165,76909,80567,
#Partially deleted in new
chr3	42979280	43056366	chr3:42979280-43056366	0	+	42979642	43056366	789624	4	365,123,104,191,	0,74240,76151,76895,
#Partially deleted in new
chr3	42979312	43054121	chr3:42979312-43054121	0	+	42979312	42979312	8553170	3	52,1287,601,	0,52954,74208,
#Partially deleted in new
chr3	42979326	43054274	chr3:42979326-43054274	0	+	42979326	42979326	8553170	2	319,754,	0,74194,
#Partially deleted in new
chr3	42979547	43057684	chr3:42979547-43057684	3	+	42979642	43056386	789624	5	98,1287,123,104,1509,	0,52719,73973,75884,76628,
#Deleted in new
chr3	43037120	43037451	chr3:43037120-43037451	7	+	43037120	43037120	16724991	1	331,	0,
#Partially deleted in new
chr3	43079231	43105939	chr3:43079231-43105939	1	-	43079688	43081431	789624	3	2305,122,104,	0,11256,26604,
#Partially deleted in new
chr3	43079233	43106076	chr3:43079233-43106076	3	-	43079688	43081431	789624	2	2303,241,	0,26602,
#Deleted in new
chr3	43087478	43088068	chr3:43087478-43088068	3	+	43087478	43087478	8553170	2	252,257,	0,333,
#Deleted in new
chr3	43088235	43090443	chr3:43088235-43090443	3	+	43088235	43088235	8553170	2	616,85,	0,2123,
#Partially deleted in new
chr3	43286511	43348838	chr3:43286511-43348838	1	+	43303203	43348557	0	8	164,50,62,695,142,213,135,1500,	0,3228,13242,16586,45657,53775,56832,60827,
#Partially deleted in new
chr3	43286537	43351143	chr3:43286537-43351143	3	+	43303203	43348557	0	6	138,695,142,213,135,3805,	0,16560,45631,53749,56806,60801,
#Partially deleted in new
chr3	43286539	43351138	chr3:43286539-43351138	1	+	43303203	43348557	0	7	136,62,695,142,213,135,3800,	0,13214,16558,45629,53747,56804,60799,
#Partially deleted in new
chr3	43286585	43348753	chr3:43286585-43348753	1	+	43332197	43348557	789624	5	90,142,213,135,1415,	0,45583,53701,56758,60753,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	43303111	43333390	chr3:43303111-43333390	0	+	43303111	43303111	8553170	2	681,1222,	0,29057,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	43314950	43315255	chr3:43314950-43315255	3	+	43314950	43314950	8553170	1	305,	0,
#Partially deleted in new
chr3	43332165	43340681	chr3:43332165-43340681	0	+	43332165	43332165	8553170	2	145,395,	0,8121,
#Partially deleted in new
chr3	43343235	43347606	chr3:43343235-43347606	0	+	43343235	43343235	8553170	2	243,268,	0,4103,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	43343350	43424764	chr3:43343350-43424764	0	+	43343350	43343350	8553170	3	128,102,240,	0,18416,81174,
#Deleted in new
chr3	43346922	43352152	chr3:43346922-43352152	3	-	43346922	43346922	789624	3	1384,51,555,	0,4408,4675,
#Deleted in new
chr3	43349643	43351962	chr3:43349643-43351962	0	-	43349643	43349643	8553170	3	334,51,365,	0,1687,1954,
#Partially deleted in new
chr3	43354858	43366208	chr3:43354858-43366208	0	-	43354858	43354858	8553170	2	198,372,	0,10978,
#Partially deleted in new
chr3	43365847	43622068	chr3:43365847-43622068	3	-	43366905	43605852	789624	13	1127,117,129,192,183,75,56,570,120,135,198,150,160,	0,66763,183872,189430,195372,199805,208961,210844,214505,232684,234536,239866,256061,
#Partially deleted in new
chr3	43366347	43621965	chr3:43366347-43621965	1	-	43366905	43605852	789624	12	627,117,129,192,183,75,56,120,135,198,150,57,	0,66263,183372,188930,194872,199305,208461,214005,232184,234036,239366,255561,
#Partially deleted in new
chr3	43366358	43621984	chr3:43366358-43621984	1	-	43366905	43605852	789624	12	616,117,129,192,183,75,56,570,120,135,150,76,	0,66252,183361,188919,194861,199294,208450,210333,213994,232173,239355,255550,
#Partially deleted in new
chr3	43366555	43622011	chr3:43366555-43622011	1	-	43372760	43605852	789624	13	419,120,129,192,183,75,56,570,120,135,198,150,103,	0,6172,183164,188722,194664,199097,208253,210136,213797,231976,233828,239158,255353,
#Partially deleted in new
chr3	43366642	43622003	chr3:43366642-43622003	1	-	43366905	43605852	789624	11	332,117,129,192,183,75,56,570,120,150,95,	0,65968,183077,188635,194577,199010,208166,210049,213710,239071,255266,
#Partially deleted in new
chr3	43366888	43555411	chr3:43366888-43555411	0	-	43366905	43555411	789624	5	86,117,129,117,134,	0,65722,182831,184583,188389,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	43472476	43472596	chr3:43472476-43472596	3	+	43472476	43472476	8553170	1	120,	0,
#Partially deleted in new
chr3	43484971	43485880	chr3:43484971-43485880	7	-	43484971	43484971	16724991	2	271,244,	0,665,
#Partially deleted in new
chr3	43561372	43622066	chr3:43561372-43622066	0	-	43561372	43605852	789624	6	30,75,135,198,150,158,	0,4280,37159,39011,44341,60536,
#Partially deleted in new
chr3	43577034	43622003	chr3:43577034-43622003	0	-	43577034	43605852	789624	4	227,120,150,95,	0,3318,28679,44874,
#Partially deleted in new
chr3	43598564	43621897	chr3:43598564-43621897	0	-	43598564	43605852	789624	4	102,198,150,125,	0,1819,7149,23208,
#Partially deleted in new
chr3	43598580	43621952	chr3:43598580-43621952	0	-	43598580	43605852	789624	5	86,198,150,67,44,	0,1803,7133,19439,23328,
#Partially deleted in new
chr3	43598581	43691594	chr3:43598581-43691594	0	-	43598581	43605852	789624	4	85,198,150,78,	0,1802,7132,92935,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	43636308	43638894	chr3:43636308-43638894	0	-	43636308	43636308	8553170	3	230,181,220,	0,1294,2366,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	43638674	43691572	chr3:43638674-43691572	0	-	43638674	43638674	8553170	3	409,166,56,	0,50636,52842,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	43690107	43719541	chr3:43690107-43719541	0	+	43690107	43690107	8553170	8	95,86,373,118,155,112,187,1099,	0,9168,12107,17546,21601,24839,27563,28335,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	43690869	43722725	chr3:43690869-43722725	3	+	43690992	43718532	789624	7	170,86,373,155,112,187,4283,	0,8406,11345,20839,24077,26801,27573,
#Partially deleted in new
chr3	43690879	43718797	chr3:43690879-43718797	1	+	43690992	43718506	789624	6	160,86,373,155,112,355,	0,8396,11335,20829,24067,27563,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	43690891	43699745	chr3:43690891-43699745	0	+	43690891	43690891	8553170	2	148,470,	0,8384,
#Partially deleted in new
chr3	43690892	43734364	chr3:43690892-43734364	0	+	43690992	43718532	789624	9	147,86,373,155,112,187,119,84,315,	0,8383,11322,20816,24054,26778,27550,42987,43157,
#Partially deleted in new
chr3	43690899	43719905	chr3:43690899-43719905	0	+	43690992	43711728	789624	5	140,86,155,187,1463,	0,8376,20809,26771,27543,
#Partially deleted in new
chr3	43690905	43718762	chr3:43690905-43718762	0	+	43690992	43717696	789624	6	134,86,373,155,187,320,	0,8370,11309,20803,26765,27537,
#Partially deleted in new
chr3	43690950	43714956	chr3:43690950-43714956	0	+	43690992	43699503	789624	7	89,86,32,97,373,155,10,	0,8325,8551,10961,11264,20758,23996,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	43690968	43719837	chr3:43690968-43719837	0	+	43690992	43695056	789624	8	71,251,86,373,155,112,187,1395,	0,3934,8307,11246,20740,23978,26702,27474,
#Partially deleted in new
chr3	43690971	43720811	chr3:43690971-43720811	0	+	43690992	43702508	789624	6	68,86,201,155,187,2369,	0,8304,11415,20737,26699,27471,
#Partially deleted in new
chr3	43690983	43719013	chr3:43690983-43719013	0	+	43690992	43711728	789624	5	56,86,155,112,571,	0,8292,20725,23963,27459,
#Partially deleted in new
chr3	43691093	43734358	chr3:43691093-43734358	1	+	43699351	43718532	789624	8	416,86,373,155,112,187,119,479,	0,8182,11121,20615,23853,26577,27349,42786,
#Partially deleted in new
chr3	43691256	43719826	chr3:43691256-43719826	0	+	43699351	43718532	789624	7	253,86,373,155,112,187,1384,	0,8019,10958,20452,23690,26414,27186,
#Partially deleted in new
chr3	43711708	43718606	chr3:43711708-43718606	0	+	43711708	43718549	789624	4	155,112,92,164,	0,3238,6057,6734,
#Partially deleted in new
chr3	43717670	43734371	chr3:43717670-43734371	0	+	43717670	43718532	789624	3	187,119,322,	0,772,16379,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	43778960	43779982	chr3:43778960-43779982	3	-	43778960	43778960	8553170	3	177,123,111,	0,634,911,
#Deleted in new
chr3	43996895	43997443	chr3:43996895-43997443	3	+	43996895	43996895	8553170	1	548,	0,
#Deleted in new
chr3	43998080	43999149	chr3:43998080-43999149	3	-	43998080	43998080	8553170	1	1069,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	44071086	44071186	chr3:44071086-44071186	3	+	44071086	44071086	8553170	1	100,	0,
#Deleted in new
chr3	44114211	44114310	chr3:44114211-44114310	3	+	44114211	44114211	5263520	1	99,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	44115817	44117487	chr3:44115817-44117487	3	-	44115817	44115817	8553170	1	1670,	0,
#Deleted in new
chr3	44117298	44122365	chr3:44117298-44122365	3	+	44117298	44117298	8553170	1	5067,	0,
#Partially deleted in new
chr3	44241885	44332098	chr3:44241885-44332098	3	+	44242053	44332011	789624	20	514,2419,62,128,65,140,86,126,64,152,93,116,67,175,101,166,165,204,184,307,	0,967,13082,14265,20533,25111,27330,28799,40082,45503,45861,48885,62129,63261,64440,67939,79141,81206,86364,89906,
#Deleted in new
chr3	44337940	44338552	chr3:44337940-44338552	3	-	44337940	44337940	8553170	1	612,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	44338118	44359804	chr3:44338118-44359804	1	+	44354782	44358264	789624	4	201,73,136,1588,	0,16620,19622,20098,
#Partially deleted in new
chr3	44338118	44407790	chr3:44338118-44407790	1	+	44354782	44407682	789624	11	201,73,136,154,253,123,98,92,233,132,349,	0,16620,19622,23246,29337,54736,58281,58624,62236,63084,69323,
#Partially deleted in new
chr3	44338121	44367624	chr3:44338121-44367624	0	+	44338121	44338121	8553170	4	198,73,154,169,	0,16617,23243,29334,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	44338451	44409451	chr3:44338451-44409451	3	+	44354782	44407682	789624	11	383,73,136,154,253,123,98,92,233,132,2010,	0,16287,19289,22913,29004,54403,57948,58291,61903,62751,68990,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	44338451	44359802	chr3:44338451-44359802	1	+	44354782	44358264	789624	4	383,73,136,1586,	0,16287,19289,19765,
#Partially deleted in new
chr3	44338751	44367879	chr3:44338751-44367879	0	+	44338751	44338751	8553170	5	83,73,136,154,348,	0,15987,18989,22613,28780,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	44338756	44409451	chr3:44338756-44409451	0	+	44354782	44367560	789624	11	78,73,136,154,177,123,98,92,233,132,2010,	0,15982,18984,22608,28775,54098,57643,57986,61598,62446,68685,
#Partially deleted in new
chr3	44338759	44363037	chr3:44338759-44363037	1	+	44354782	44362448	789624	5	75,73,136,154,618,	0,15979,18981,22605,23660,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	44338782	44341425	chr3:44338782-44341425	0	+	44338782	44338782	8553170	2	52,1739,	0,904,
#Partially deleted in new
chr3	44338805	44400550	chr3:44338805-44400550	0	+	44354782	44367560	789624	9	29,73,136,154,177,123,98,92,196,	0,15933,18935,22559,28726,54049,57594,57937,61549,
#Partially deleted in new
chr3	44396786	44407740	chr3:44396786-44407740	0	+	44396786	44396786	8553170	4	48,66,132,299,	0,3735,4416,10655,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	44421126	44439917	chr3:44421126-44439917	5	-	44421126	44421126	16724991	2	687,121,	0,18670,
#Partially deleted in new
chr3	44421129	44424007	chr3:44421129-44424007	4	-	44421129	44421129	16724991	2	684,45,	0,2833,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	44421129	44422937	chr3:44421129-44422937	4	-	44421129	44421129	16724991	2	684,85,	0,1723,
#Deleted in new
chr3	44421315	44421811	chr3:44421315-44421811	5	-	44421315	44421315	16724991	1	496,	0,
#Partially deleted in new
chr3	44424133	44429528	chr3:44424133-44429528	3	+	44424133	44424133	8553170	5	179,114,70,95,463,	0,3911,4421,4713,4932,
#Partially deleted in new
chr3	44427976	44429529	chr3:44427976-44429529	0	+	44427976	44427976	789624	4	182,70,95,464,	0,578,870,1089,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	44431719	44477670	chr3:44431719-44477670	3	-	44446574	44455549	789624	8	17020,111,127,95,169,576,121,80,	0,17793,18727,19148,19594,23401,26524,45871,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	44439769	44455700	chr3:44439769-44455700	1	-	44446574	44455549	789624	6	8970,111,127,95,169,580,	0,9743,10677,11098,11544,15351,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	44450120	44455700	chr3:44450120-44455700	1	-	44450438	44455549	789624	10	453,95,118,36,13,53,309,33,3,178,	0,747,1193,1312,1349,5000,5054,5364,5398,5402,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	44450122	44458264	chr3:44450122-44458264	0	-	44450122	44450122	8553170	5	451,95,169,576,21,	0,745,1191,4998,8121,
#Partially deleted in new
chr3	44454878	44477649	chr3:44454878-44477649	0	-	44454878	44454878	8553170	2	818,59,	0,22712,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	44494846	44502641	chr3:44494846-44502641	0	-	44494937	44502641	8553170	3	255,744,100,	0,5047,7695,
#Partially deleted in new
chr3	44498969	44510636	chr3:44498969-44510636	3	-	44499144	44502979	789624	4	1665,127,92,84,	0,3572,3995,11583,
#Partially deleted in new
chr3	44499522	44510636	chr3:44499522-44510636	0	-	44499522	44499522	8553170	3	1115,127,84,	0,3019,11030,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	44499575	44503110	chr3:44499575-44503110	0	-	44499575	44499575	8553170	1	3535,	0,
#Deleted in new
chr3	44524743	44525805	chr3:44524743-44525805	7	-	44524743	44524743	16724991	1	1062,	0,
#Deleted in new
chr3	44528954	44529391	chr3:44528954-44529391	7	-	44528954	44528954	16724991	1	437,	0,
#Partially deleted in new
chr3	44555192	44571494	chr3:44555192-44571494	1	+	44557047	44571375	789624	6	289,541,169,92,127,1573,	0,1737,10294,12719,13114,14729,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	44555192	44583445	chr3:44555192-44583445	1	+	44557047	44582991	789624	6	289,541,169,92,127,474,	0,1737,10294,12719,13114,27779,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	44555202	44583483	chr3:44555202-44583483	1	+	44557047	44582991	789624	6	316,541,169,92,127,512,	0,1727,10284,12709,13104,27769,
#Partially deleted in new
chr3	44555207	44572158	chr3:44555207-44572158	3	+	44557047	44571375	789624	6	311,541,169,92,127,2237,	0,1722,10279,12704,13099,14714,
#Partially deleted in new
chr3	44555228	44570128	chr3:44555228-44570128	0	+	44557047	44568323	789624	5	253,541,169,127,204,	0,1701,10258,13078,14696,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	44555443	44583306	chr3:44555443-44583306	0	+	44565513	44582991	789624	6	38,169,92,127,741,335,	0,10043,12468,12863,14481,27528,
#Partially deleted in new
chr3	44557356	44685653	chr3:44557356-44685653	3	-	44557356	44557356	8553170	3	236,125,95,	0,103905,128202,
#Partially deleted in new
chr3	44557356	44568477	chr3:44557356-44568477	0	+	44557356	44557356	8553170	4	114,169,92,171,	0,8130,10555,10950,
#Partially deleted in new
chr3	44565558	44594173	chr3:44565558-44594173	0	+	44565558	44594063	789624	4	97,92,127,160,	0,2353,2748,28455,
#Partially deleted in new
chr3	44578222	44594311	chr3:44578222-44594311	0	+	44594193	44594311	789624	3	67,109,298,	0,7882,15791,
#Deleted in new
chr3	44579937	44581026	chr3:44579937-44581026	7	-	44579937	44579937	16724991	1	1089,	0,
#Partially deleted in new
chr3	44584887	44629390	chr3:44584887-44629390	0	+	44629154	44629390	789624	3	120,109,317,	0,1217,44186,
#Partially deleted in new
chr3	44584961	44586702	chr3:44584961-44586702	0	+	44584961	44584961	8553170	2	46,598,	0,1143,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	44584963	44599694	chr3:44584963-44599694	3	+	44594193	44595189	789624	3	44,109,5681,	0,1141,9050,
#Partially deleted in new
chr3	44584963	44594295	chr3:44584963-44594295	0	+	44594193	44594295	789624	4	44,109,121,282,	0,1141,2166,9050,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	44617127	44624797	chr3:44617127-44624797	3	-	44617127	44617127	789624	2	547,76,	0,7594,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	44625018	44647504	chr3:44625018-44647504	1	+	44629154	44646525	789624	6	125,471,160,92,127,1014,	0,4055,6043,7086,7454,21472,
#Partially deleted in new
chr3	44625039	44644220	chr3:44625039-44644220	3	+	44629154	44644220	789624	6	104,471,160,92,127,2321,	0,4034,6022,7065,7433,16860,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	44625048	44648471	chr3:44625048-44648471	1	+	44629154	44646525	789624	6	95,480,160,92,127,1981,	0,4016,6013,7056,7424,21442,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	44625094	44647778	chr3:44625094-44647778	0	+	44629154	44630945	789624	7	49,471,133,160,92,127,1288,	0,3979,5719,5967,7010,7378,21396,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	44628987	44645262	chr3:44628987-44645262	1	+	44629154	44644220	789624	5	557,160,92,127,3363,	0,2074,3117,3485,12912,
#Partially deleted in new
chr3	44648726	44660789	chr3:44648726-44660789	3	+	44651067	44659947	789624	4	108,319,145,2089,	0,2214,3830,9974,
#Partially deleted in new
chr3	44648740	44658765	chr3:44648740-44658765	0	+	44651067	44658765	789624	4	94,316,145,65,	0,2203,3816,9960,
#Partially deleted in new
chr3	44648740	44652701	chr3:44648740-44652701	0	+	44651067	44652701	789624	3	71,316,145,	0,2203,3816,
#Partially deleted in new
chr3	44648741	44660791	chr3:44648741-44660791	1	+	44651067	44658820	789624	3	93,319,2091,	0,2199,9959,
#Partially deleted in new
chr3	44648741	44658878	chr3:44648741-44658878	1	+	44651067	44658820	789624	3	70,316,178,	0,2202,9959,
#Partially deleted in new
chr3	44648744	44658895	chr3:44648744-44658895	1	+	44651067	44658820	789624	3	67,319,195,	0,2196,9956,
#Deleted in new
chr3	44667411	44669364	chr3:44667411-44669364	3	+	44667411	44667411	8553170	1	1953,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	44709310	44710886	chr3:44709310-44710886	7	-	44709310	44709310	16724991	1	1576,	0,
#Partially deleted in new
chr3	44712642	44723829	chr3:44712642-44723829	3	+	44720261	44722452	789624	3	102,114,2957,	0,7560,8230,
#Partially deleted in new
chr3	44712645	44723831	chr3:44712645-44723831	1	+	44720261	44722452	789624	4	99,98,114,2959,	0,1945,7557,8227,
#Partially deleted in new
chr3	44712645	44722977	chr3:44712645-44722977	1	+	44720261	44722452	789624	3	95,114,2105,	0,7557,8227,
#Partially deleted in new
chr3	44712675	44721282	chr3:44712675-44721282	0	+	44720261	44721282	789624	3	69,114,410,	0,7527,8197,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	44729595	44737083	chr3:44729595-44737083	3	+	44734421	44735237	789624	3	127,85,2887,	0,1880,4601,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	44729605	44737083	chr3:44729605-44737083	1	+	44734421	44735237	789624	3	410,85,2887,	0,1870,4591,
#Deleted in new
chr3	44729623	44731919	chr3:44729623-44731919	0	+	44729623	44729623	8553170	2	99,444,	0,1852,
#Partially deleted in new
chr3	44729630	44734299	chr3:44729630-44734299	0	+	44729630	44729630	8553170	3	385,85,103,	0,1845,4566,
#Deleted in new
chr3	44729780	44732265	chr3:44729780-44732265	0	+	44729780	44729780	8553170	3	235,85,159,	0,1695,2326,
#Partially deleted in new
chr3	44737660	44761511	chr3:44737660-44761511	0	-	44737660	44737660	8553170	4	137,208,145,17,	0,15684,16563,23834,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	44748743	44761662	chr3:44748743-44761662	3	-	44753340	44761602	789624	3	4809,145,168,	0,5480,12751,
#Partially deleted in new
chr3	44761716	44853261	chr3:44761716-44853261	3	+	44761865	44852735	0	35	168,43,184,77,38,98,180,210,126,123,124,77,210,178,142,142,198,108,106,166,151,86,70,87,105,123,147,102,165,110,73,38,166,132,589,	0,12678,13537,16398,19168,23128,24678,32500,35834,36117,38597,39733,40048,41097,43310,44128,49129,50465,51358,53194,64322,64658,65742,66497,68254,69179,76558,78638,79357,81408,86268,86804,90070,90491,90956,
#Partially deleted in new
chr3	44761720	44853261	chr3:44761720-44853261	0	+	44761865	44778163	789624	34	164,184,77,38,98,180,210,126,123,124,77,210,178,142,142,198,108,106,166,151,86,70,87,105,123,147,102,165,110,73,38,166,132,589,	0,13533,16394,19164,23124,24674,32496,35830,36113,38593,39729,40044,41093,43306,44124,49125,50461,51354,53190,64318,64654,65738,66493,68250,69175,76554,78634,79353,81404,86264,86800,90066,90487,90952,
#Partially deleted in new
chr3	44761861	44827490	chr3:44761861-44827490	0	+	44794261	44827490	789624	18	23,38,210,126,123,124,77,210,178,142,142,198,108,106,166,151,86,32,	0,19023,32355,35689,35972,38452,39588,39903,40952,43165,43983,48984,50320,51213,53049,64177,64513,65597,
#Partially deleted in new
chr3	44799186	44853021	chr3:44799186-44853021	1	+	44799288	44852735	789624	26	105,124,77,210,178,142,142,198,108,106,166,151,86,70,87,105,123,147,102,165,110,73,38,166,132,349,	0,1127,2263,2578,3627,5840,6658,11659,12995,13888,15724,26852,27188,28272,29027,30784,31709,39088,41168,41887,43938,48798,49334,52600,53021,53486,
#Partially deleted in new
chr3	44799212	44813270	chr3:44799212-44813270	0	+	44799212	44799212	8553170	10	79,124,77,210,178,142,142,198,108,196,	0,1101,2237,2552,3601,5814,6632,11633,12969,13862,
#Partially deleted in new
chr3	44814970	44853254	chr3:44814970-44853254	0	+	44814970	44827038	789624	17	106,151,86,198,70,87,105,123,147,102,165,110,73,38,166,132,582,	0,11068,11404,12025,12488,13243,15000,15925,23304,25384,26103,28154,33014,33550,36816,37237,37702,
#Partially deleted in new
chr3	44843122	44873376	chr3:44843122-44873376	0	+	44843122	44852735	789624	7	112,73,38,166,132,122,48,	0,4862,5398,8664,9085,9550,30206,
#Partially deleted in new
chr3	44861868	44865670	chr3:44861868-44865670	3	+	44861924	44865180	789624	3	248,147,631,	0,2328,3171,
#Deleted in new
chr3	44861887	44861981	chr3:44861887-44861981	3	+	44861887	44861887	5263520	1	94,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	44861903	44865670	chr3:44861903-44865670	0	+	44861903	44861903	8553170	2	2440,631,	0,3136,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	44874607	44889170	chr3:44874607-44889170	0	+	44874607	44874607	8553170	3	90,174,1482,	0,10717,13081,
#Partially deleted in new
chr3	44874610	44914990	chr3:44874610-44914990	3	+	44874678	44913725	789624	14	87,174,107,130,119,108,175,139,104,252,279,170,137,1407,	0,10714,13078,15992,18966,22098,26913,27182,29273,32338,35479,36347,36659,38973,
#Partially deleted in new
chr3	44874622	44876490	chr3:44874622-44876490	0	+	44874622	44874622	8553170	2	75,62,	0,1806,
#Partially deleted in new
chr3	44874634	44901570	chr3:44874634-44901570	0	+	44874678	44890685	789624	6	63,174,130,119,108,47,	0,10690,15968,18942,22074,26889,
#Partially deleted in new
chr3	44890338	44896739	chr3:44890338-44896739	0	+	44890338	44890338	8553170	3	394,119,31,	0,3238,6370,
#Partially deleted in new
chr3	44899177	44900925	chr3:44899177-44900925	3	+	44899177	44899177	8553170	2	472,97,	0,1651,
#Partially deleted in new
chr3	44903534	44907202	chr3:44903534-44907202	0	+	44903534	44903534	8553170	2	453,254,	0,3414,
#Partially deleted in new
chr3	44915256	44945196	chr3:44915256-44945196	0	-	44917894	44945196	789624	5	2887,131,82,97,29,	0,14049,17861,18631,29911,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	44917408	44919338	chr3:44917408-44919338	0	-	44917408	44917408	8553170	2	735,546,	0,1384,
#Partially deleted in new
chr3	44919977	44929352	chr3:44919977-44929352	0	-	44920202	44929352	789624	2	360,47,	0,9328,
#Partially deleted in new
chr3	44924845	44976182	chr3:44924845-44976182	1	-	44926688	44959436	789624	8	2002,131,84,82,97,125,330,250,	0,4460,8061,8272,9042,20322,34285,51087,
#Partially deleted in new
chr3	44925170	44976177	chr3:44925170-44976177	3	-	44926688	44959436	789624	7	1677,131,82,97,125,330,245,	0,4135,7947,8717,19997,33960,50762,
#Deleted in new
chr3	44926522	44933449	chr3:44926522-44933449	0	-	44926522	44926522	8553170	4	325,131,84,332,	0,2783,6384,6595,
#Partially deleted in new
chr3	44926612	44976166	chr3:44926612-44976166	1	-	44926688	44959436	789624	8	235,131,82,97,125,98,334,234,	0,2693,6505,7275,18555,31975,32514,49320,
#Partially deleted in new
chr3	44929305	44945329	chr3:44929305-44945329	0	-	44929305	44933959	789624	4	131,82,97,162,	0,3812,4582,15862,
#Partially deleted in new
chr3	44933137	44976185	chr3:44933137-44976185	0	-	44933137	44933959	789624	4	62,97,125,253,	0,750,12030,42795,
#Partially deleted in new
chr3	44933187	44959432	chr3:44933187-44959432	0	-	44945263	44959432	789624	4	12,97,125,306,	0,700,11980,25939,
#Partially deleted in new
chr3	44937672	44938482	chr3:44937672-44938482	7	+	44937672	44937672	16724991	2	310,192,	0,618,
#Partially deleted in new
chr3	44945167	44969931	chr3:44945167-44969931	0	-	44945167	44945167	8553170	3	125,330,323,	0,13963,24441,
#Partially deleted in new
chr3	44975240	45012666	chr3:44975240-45012666	0	+	44975240	44975240	8553170	9	236,102,95,166,71,124,156,159,484,	0,13899,14309,21846,26297,30050,32179,35994,36942,
#Partially deleted in new
chr3	44975356	44989242	chr3:44975356-44989242	0	+	44975356	44975356	8553170	2	120,99,	0,13787,
#Partially deleted in new
chr3	44975467	45005375	chr3:44975467-45005375	0	+	44975467	44975467	8553170	6	40,102,95,166,71,85,	0,13672,14082,21619,26070,29823,
#Partially deleted in new
chr3	44976229	45011470	chr3:44976229-45011470	3	+	44976277	45011339	0	8	105,102,95,166,71,124,156,236,	0,12910,13320,20857,25308,29061,31190,35005,
#Partially deleted in new
chr3	44976250	45002239	chr3:44976250-45002239	0	+	44976250	44976250	8553170	5	84,102,95,166,702,	0,12889,13299,20836,25287,
#Partially deleted in new
chr3	44976250	45012253	chr3:44976250-45012253	0	+	44976250	44976250	789624	7	84,166,71,124,156,159,71,	0,20836,25287,29040,31169,34984,35932,
#Partially deleted in new
chr3	44976263	45012633	chr3:44976263-45012633	0	+	44976263	44976263	8553170	9	71,102,95,166,71,124,156,159,451,	0,12876,13286,20823,25274,29027,31156,34971,35919,
#Partially deleted in new
chr3	44976275	45036066	chr3:44976275-45036066	0	+	44976275	44976275	8553170	3	59,166,543,	0,20811,59248,
#Partially deleted in new
chr3	44977091	44989242	chr3:44977091-44989242	0	+	44977091	44977091	8553170	2	326,103,	0,12048,
#Partially deleted in new
chr3	45001547	45036071	chr3:45001547-45036071	0	+	45001547	45001547	8553170	3	61,99,548,	0,29279,33976,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	45004159	45011470	chr3:45004159-45011470	0	+	45004159	45004159	8553170	3	1255,156,236,	0,3260,7075,
#Partially deleted in new
chr3	45011232	45012668	chr3:45011232-45012668	0	+	45011232	45011232	8553170	3	161,108,165,	0,950,1271,
#Partially deleted in new
chr3	45026182	45036071	chr3:45026182-45036071	3	+	45026362	45035924	0	3	289,99,548,	0,4644,9341,
#Partially deleted in new
chr3	45030129	45036068	chr3:45030129-45036068	1	+	45030843	45035924	789624	3	108,99,545,	0,697,5394,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	45034473	45034588	chr3:45034473-45034588	3	-	45034473	45034473	8553170	1	115,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	45082277	45146422	chr3:45082277-45146422	3	-	45085637	45146287	789624	9	3790,88,366,381,222,369,363,210,217,	0,6776,8895,10999,13069,28195,29805,36134,63928,
#Partially deleted in new
chr3	45110215	45146422	chr3:45110215-45146422	1	-	45110464	45146287	789624	4	626,363,210,217,	0,1867,8196,35990,
#Partially deleted in new
chr3	45112336	45139595	chr3:45112336-45139595	0	-	45112336	45112336	8553170	3	109,210,244,	0,6075,27015,
#Deleted in new
chr3	45159773	45160175	chr3:45159773-45160175	7	-	45159773	45159773	16724991	1	402,	0,
#Deleted in new
chr3	45224465	45226278	chr3:45224465-45226278	3	-	45225124	45226027	789624	1	1813,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	45255408	45255620	chr3:45255408-45255620	3	-	45255408	45255408	8553170	1	212,	0,
#Partially deleted in new
chr3	45388505	45548837	chr3:45388505-45548837	1	+	45394453	45547530	789624	22	175,66,255,129,92,61,90,144,108,160,105,116,284,99,138,101,183,170,78,112,128,1487,	0,3077,5927,11739,28976,31163,58385,70237,85737,87962,97186,100191,103011,107769,111936,124629,127588,129397,131713,135491,153323,158845,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr3	45388560	45549421	chr3:45388560-45549421	3	+	45394453	45547530	789624	21	120,255,129,92,61,90,144,108,160,105,116,284,99,138,101,183,170,78,112,128,2071,	0,5872,11684,28921,31108,58330,70182,85682,87907,97131,100136,102956,107714,111881,124574,127533,129342,131658,135436,153268,158790,
#Partially deleted in new
chr3	45388563	45547609	chr3:45388563-45547609	1	+	45394453	45547530	789624	20	117,255,92,61,90,144,108,160,105,116,284,99,138,101,183,170,78,112,128,259,	0,5869,28918,31105,58327,70179,85679,87904,97128,100133,102953,107711,111878,124571,127530,129339,131655,135433,153265,158787,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	45388575	45422409	chr3:45388575-45422409	0	+	45388575	45388575	8553170	6	105,255,129,92,61,1239,	0,5857,11669,28906,31093,32595,
#Partially deleted in new
chr3	45388575	45548837	chr3:45388575-45548837	1	+	45394453	45547530	789624	22	105,66,255,129,92,61,90,144,108,160,105,116,284,99,138,101,183,170,78,112,128,1487,	0,3007,5857,11669,28906,31093,58315,70167,85667,87892,97116,100121,102941,107699,111866,124559,127518,129327,131643,135421,153253,158775,
#Partially deleted in new
chr3	45388618	45400353	chr3:45388618-45400353	0	+	45394453	45400353	789624	5	62,74,66,255,109,	0,414,2964,5814,11626,
#Partially deleted in new
chr3	45388835	45548599	chr3:45388835-45548599	1	+	45394453	45547530	789624	22	271,66,255,129,92,61,90,144,108,160,105,116,284,99,138,101,183,170,78,112,128,1249,	0,2747,5597,11409,28646,30833,58055,69907,85407,87632,96856,99861,102681,107439,111606,124299,127258,129067,131383,135161,152993,158515,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	45483973	45509545	chr3:45483973-45509545	3	-	45483973	45483973	789624	4	58,257,71,189,	0,11270,22938,25383,
#Partially deleted in new
chr3	45500540	45538463	chr3:45500540-45538463	0	+	45500540	45500540	8553170	7	39,101,183,170,78,112,121,	0,12594,15553,17362,19678,23456,37802,
#Partially deleted in new
chr3	45541593	45547554	chr3:45541593-45547554	0	+	45541593	45541593	8553170	2	363,204,	0,5757,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	45594323	45673898	chr3:45594323-45673898	1	+	45594879	45673544	789624	6	1964,102,68,63,131,445,	0,41826,71326,73970,78366,79130,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	45594858	45686338	chr3:45594858-45686338	3	+	45594879	45677059	789624	8	1429,102,68,63,131,52,69,9417,	0,41291,70791,73435,77831,78595,79484,82063,
#Partially deleted in new
chr3	45665674	45674566	chr3:45665674-45674566	0	+	45665674	45665674	8553170	5	43,63,131,52,224,	0,2619,7015,7779,8668,
#Partially deleted in new
chr3	45679042	45688882	chr3:45679042-45688882	3	-	45679042	45679042	8553170	2	1029,507,	0,9333,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	45679231	45689134	chr3:45679231-45689134	0	-	45679231	45679231	8553170	2	840,115,	0,9788,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	45689055	45709648	chr3:45689055-45709648	0	+	45689055	45689055	8553170	6	79,40,98,75,128,151,	0,1292,14382,16079,17724,20442,
#Partially deleted in new
chr3	45689185	45745407	chr3:45689185-45745407	0	+	45706883	45735318	789624	20	1202,98,75,128,150,60,34,102,86,87,69,80,99,128,70,73,94,93,58,1875,	0,14252,15949,17594,20312,23951,24860,30314,32814,33683,34289,42115,42867,46060,48397,48586,49392,49595,50401,54347,
#Partially deleted in new
chr3	45689240	45743804	chr3:45689240-45743804	1	+	45706883	45743669	789624	21	257,40,98,75,128,150,60,34,102,86,87,69,80,99,139,70,73,94,93,58,272,	0,1107,14197,15894,17539,20257,23896,24805,30259,32759,33628,34234,42060,42812,45994,48342,48531,49337,49540,50346,54292,
#Partially deleted in new
chr3	45689261	45745424	chr3:45689261-45745424	3	+	45689465	45743669	789624	20	236,98,75,128,150,60,34,102,86,87,69,80,99,139,70,73,94,93,58,1892,	0,14176,15873,17518,20236,23875,24784,30238,32738,33607,34213,42039,42791,45973,48321,48510,49316,49519,50325,54271,
#Partially deleted in new
chr3	45689261	45713411	chr3:45689261-45713411	0	+	45689261	45689261	8553170	6	236,98,75,128,150,275,	0,14176,15873,17518,20236,23875,
#Partially deleted in new
chr3	45689354	45743935	chr3:45689354-45743935	0	+	45689465	45709508	789624	19	143,98,75,150,60,34,102,86,87,69,80,99,139,70,73,94,93,58,403,	0,14083,15780,20143,23782,24691,30145,32645,33514,34120,41946,42698,45880,48228,48417,49223,49426,50232,54178,
#Partially deleted in new
chr3	45689355	45707318	chr3:45689355-45707318	0	+	45689355	45689355	8553170	4	142,98,75,539,	0,14082,15779,17424,
#Partially deleted in new
chr3	45689356	45713174	chr3:45689356-45713174	0	+	45703460	45713174	789624	6	141,40,98,75,150,38,	0,991,14081,15778,20141,23780,
#Partially deleted in new
chr3	45689458	45714082	chr3:45689458-45714082	0	+	45689458	45689458	8553170	7	39,98,75,128,150,56,37,	0,13979,15676,17321,20039,23682,24587,
#Partially deleted in new
chr3	45689458	45709643	chr3:45689458-45709643	0	+	45689458	45689458	8553170	5	87,98,75,128,146,	0,13979,15676,17321,20039,
#Partially deleted in new
chr3	45713195	45719565	chr3:45713195-45719565	0	+	45713195	45713195	8553170	2	884,66,	0,6304,
#Partially deleted in new
chr3	45730602	45738835	chr3:45730602-45738835	0	+	45731348	45738835	789624	8	68,80,99,139,70,73,94,55,	0,698,1450,4632,6980,7169,7975,8178,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	45734594	45745408	chr3:45734594-45745408	0	+	45734594	45734594	8553170	7	779,70,73,94,93,58,1876,	0,2988,3177,3983,4186,4992,8938,
#Deleted in new
chr3	45737243	45738629	chr3:45737243-45738629	0	+	45737243	45737243	8553170	3	409,73,52,	0,528,1334,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	45737761	45739907	chr3:45737761-45739907	0	+	45737761	45737761	8553170	4	83,94,93,321,	0,816,1019,1825,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	45742674	45742970	chr3:45742674-45742970	3	+	45742674	45742674	8553170	1	296,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	45749626	45750651	chr3:45749626-45750651	3	+	45749626	45749626	8553170	1	1025,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	45755449	45796470	chr3:45755449-45796470	1	-	45758977	45796419	789624	10	3678,166,160,205,163,242,228,92,141,172,	0,4407,7463,10087,14759,15767,20311,24559,26633,40849,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	45755449	45796535	chr3:45755449-45796535	3	-	45758977	45796419	789624	11	3678,166,160,205,163,242,111,228,92,141,237,	0,4407,7463,10087,14759,15767,17055,20311,24559,26633,40849,
#Partially deleted in new
chr3	45756003	45796483	chr3:45756003-45796483	1	-	45758436	45796419	789624	12	755,214,166,160,205,163,242,111,228,92,141,185,	0,2234,3853,6909,9533,14205,15213,16501,19757,24005,26079,40295,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	45758503	45772339	chr3:45758503-45772339	0	-	45758503	45758503	8553170	6	624,166,160,205,163,1123,	0,1353,4409,7033,11705,12713,
#Partially deleted in new
chr3	45759979	45765770	chr3:45759979-45765770	0	-	45759979	45759979	8553170	3	43,160,234,	0,2933,5557,
#Partially deleted in new
chr3	45771216	45796535	chr3:45771216-45796535	0	-	45771216	45796419	789624	5	242,111,228,92,237,	0,1288,4544,8792,25082,
#Partially deleted in new
chr3	45823315	45842166	chr3:45823315-45842166	3	-	45826313	45841991	789624	10	3017,104,177,78,66,72,61,195,125,178,	0,4040,5123,7597,7757,9734,10922,12274,14611,18673,
#Partially deleted in new
chr3	45823319	45915724	chr3:45823319-45915724	1	-	45826313	45838003	789624	12	3013,104,177,78,66,72,61,195,125,89,58,304,	0,4036,5119,7593,7753,9730,10918,12270,14607,31666,89800,92101,
#Partially deleted in new
chr3	45823319	45915724	chr3:45823319-45915724	1	-	45826326	45913146	789624	10	3013,177,78,66,72,61,195,89,58,304,	0,5119,7593,7753,9730,10918,12270,31666,89800,92101,
#Partially deleted in new
chr3	45825965	45916042	chr3:45825965-45916042	0	-	45855003	45915618	789624	12	367,104,177,78,66,72,61,195,125,89,58,622,	0,1390,2473,4947,5107,7084,8272,9624,11961,29020,87154,89455,
#Partially deleted in new
chr3	45826056	45915724	chr3:45826056-45915724	0	-	45855003	45915618	789624	10	276,177,78,66,72,61,195,89,58,304,	0,2382,4856,5016,6993,8181,9533,28929,87063,89364,
#Partially deleted in new
chr3	45826240	45842129	chr3:45826240-45842129	0	-	45834287	45835758	789624	9	92,104,177,78,66,72,61,195,141,	0,1115,2198,4672,4832,6809,7997,9349,15748,
#Partially deleted in new
chr3	45826277	45842001	chr3:45826277-45842001	0	-	45826277	45826277	8553170	6	55,104,177,61,195,13,	0,1078,2161,7960,9312,15711,
#Partially deleted in new
chr3	45826301	45835784	chr3:45826301-45835784	0	-	45826313	45835784	789624	7	31,104,177,78,72,61,195,	0,1054,2137,4611,6748,7936,9288,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	45827127	45828573	chr3:45827127-45828573	0	-	45827127	45827127	8553170	2	332,135,	0,1311,
#Partially deleted in new
chr3	45830945	45841860	chr3:45830945-45841860	0	-	45830945	45830945	8553170	7	45,66,72,61,195,125,166,	0,127,2104,3292,4644,6981,10749,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	45832579	45842145	chr3:45832579-45842145	0	-	45832579	45832579	8553170	4	542,1547,125,157,	0,1658,5347,9409,
#Partially deleted in new
chr3	45832827	45842136	chr3:45832827-45842136	0	-	45832827	45832827	8553170	5	294,61,195,125,148,	0,1410,2762,5099,9161,
#Partially deleted in new
chr3	45835589	45842116	chr3:45835589-45842116	0	-	45835589	45838003	789624	3	195,121,128,	0,2337,6399,
#Partially deleted in new
chr3	45835669	45915659	chr3:45835669-45915659	0	-	45835669	45835669	8553170	4	115,125,58,239,	0,2257,77450,79751,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	45837940	45915643	chr3:45837940-45915643	0	-	45837940	45837940	8553170	5	111,89,77,58,223,	0,17045,20999,75179,77480,
#Partially deleted in new
chr3	45842264	45866571	chr3:45842264-45866571	3	+	45842264	45842264	8553170	4	35,39,506,136,	0,10785,22616,24171,
#Deleted in new
chr3	45883639	45884113	chr3:45883639-45884113	7	-	45883639	45883639	16724991	1	474,	0,
#Partially deleted in new
chr3	45886503	45903175	chr3:45886503-45903175	1	+	45900824	45901898	0	4	152,49,86,2366,	0,8402,11057,14306,
#Partially deleted in new
chr3	45886503	45903177	chr3:45886503-45903177	3	+	45894933	45901898	0	3	152,49,2368,	0,8402,14306,
#Partially deleted in new
chr3	45886508	45903174	chr3:45886508-45903174	1	+	45900824	45901898	0	2	147,2365,	0,14301,
#Partially deleted in new
chr3	45886509	45895108	chr3:45886509-45895108	0	+	45886509	45886509	8553170	2	146,203,	0,8396,
#Partially deleted in new
chr3	45886548	45901898	chr3:45886548-45901898	1	+	45894933	45901026	789624	4	107,49,86,1089,	0,8357,11012,14261,
#Partially deleted in new
chr3	45917898	45995824	chr3:45917898-45995824	1	-	45921764	45984910	0	19	3942,110,211,96,60,145,212,150,168,119,93,2427,91,144,107,126,107,167,103,	0,5757,13172,18549,20297,37350,40509,41494,44326,46437,47134,48378,51776,55189,57340,61806,63671,66957,77823,
#Partially deleted in new
chr3	45917903	45995815	chr3:45917903-45995815	3	-	45921764	45984910	0	18	3937,110,211,96,145,212,150,168,119,93,2427,91,144,107,126,107,167,94,	0,5752,13167,18544,37345,40504,41489,44321,46432,47129,48373,51771,55184,57335,61801,63666,66952,77818,
#Partially deleted in new
chr3	45917903	45958572	chr3:45917903-45958572	0	-	45921764	45958572	789624	7	1162,2428,110,211,96,145,165,	0,1509,5752,13167,18544,37345,40504,
#Partially deleted in new
chr3	45921584	45958661	chr3:45921584-45958661	1	-	45921764	45936500	789624	6	256,110,211,96,145,254,	0,2071,9486,14863,33664,36823,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	45940932	45948337	chr3:45940932-45948337	3	+	45946481	45947510	789624	2	365,1877,	0,5528,
#Deleted in new
chr3	45943471	45948353	chr3:45943471-45948353	1	+	45946481	45947510	789624	2	69,1893,	0,2989,
#Deleted in new
chr3	45945018	45947823	chr3:45945018-45947823	1	+	45946481	45947510	789624	1	2805,	0,
#Deleted in new
chr3	45945048	45947510	chr3:45945048-45947510	1	+	45946481	45947510	789624	2	134,1050,	0,1412,
#Partially deleted in new
chr3	45984580	45995824	chr3:45984580-45995824	0	-	45984580	45984580	8553170	2	442,103,	0,11141,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	46017023	46027742	chr3:46017023-46027742	3	-	46020945	46021947	789624	2	4955,326,	0,10393,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	46021839	46027487	chr3:46021839-46027487	0	-	46021839	46021947	789624	3	139,122,71,	0,316,5577,
#Deleted in new
chr3	46023295	46024156	chr3:46023295-46024156	7	+	46023295	46023295	16724991	1	861,	0,
#Deleted in new
chr3	46142357	46143677	chr3:46142357-46143677	7	-	46142357	46142357	16724991	1	1320,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	46163603	46266615	chr3:46163603-46266615	3	+	46265158	46266226	789624	4	259,217,56,1468,	0,47087,78798,101544,
#Partially deleted in new
chr3	46201708	46208396	chr3:46201708-46208396	3	-	46203245	46204313	0	2	2616,115,	0,6573,
#Partially deleted in new
chr3	46242380	46266706	chr3:46242380-46266706	1	+	46264403	46266226	789624	3	158,69,1559,	0,22006,22767,
#Partially deleted in new
chr3	46242430	46266620	chr3:46242430-46266620	1	+	46265158	46266226	789624	2	108,1473,	0,22717,
#Partially deleted in new
chr3	46242459	46265399	chr3:46242459-46265399	0	+	46265158	46265399	789624	3	79,69,252,	0,21927,22688,
#Partially deleted in new
chr3	46242460	46265221	chr3:46242460-46265221	0	+	46265158	46265221	789624	3	78,60,74,	0,21926,22687,
#Partially deleted in new
chr3	46242460	46264744	chr3:46242460-46264744	0	+	46242460	46242460	8553170	2	78,358,	0,21926,
#Partially deleted in new
chr3	46263389	46265365	chr3:46263389-46265365	0	+	46263389	46263389	8553170	2	1066,218,	0,1758,
#Partially deleted in new
chr3	46265127	46266328	chr3:46265127-46266328	1	+	46265158	46266226	789624	1	1201,	0,
#Partially deleted in new
chr3	46310590	46311922	chr3:46310590-46311922	7	-	46310590	46310590	16724991	1	1332,	0,
#Partially deleted in new
chr3	46353733	46359418	chr3:46353733-46359418	3	+	46357527	46358610	0	2	444,1942,	0,3743,
#Partially deleted in new
chr3	46353743	46360921	chr3:46353743-46360921	1	+	46357527	46359860	0	3	434,992,1245,	0,3733,5933,
#Partially deleted in new
chr3	46353863	46358688	chr3:46353863-46358688	0	+	46353863	46353863	8553170	2	314,572,	0,4253,
#Partially deleted in new
chr3	46354125	46357892	chr3:46354125-46357892	0	+	46357527	46357892	789624	3	52,95,416,	0,736,3351,
#Partially deleted in new
chr3	46357488	46360928	chr3:46357488-46360928	1	+	46357527	46359860	0	2	980,1252,	0,2188,
#Partially deleted in new
chr3	46370853	46376206	chr3:46370853-46376206	3	+	46372902	46373961	0	2	135,3315,	0,2038,
#Partially deleted in new
chr3	46372669	46373961	chr3:46372669-46373961	1	+	46372902	46373961	0	1	1292,	0,
#Deleted in new
chr3	46407162	46409523	chr3:46407162-46409523	3	+	46408079	46409114	789624	2	340,1456,	0,905,
#Deleted in new
chr3	46407165	46407962	chr3:46407165-46407962	0	+	46407165	46407165	8553170	2	26,574,	0,223,
#Deleted in new
chr3	46407557	46409523	chr3:46407557-46409523	1	+	46407670	46409114	789624	2	137,1456,	0,510,
#Deleted in new
chr3	46407582	46409114	chr3:46407582-46409114	1	+	46408079	46409114	789624	2	59,1047,	0,485,
#Deleted in new
chr3	46407618	46408731	chr3:46407618-46408731	0	+	46408079	46408731	789624	3	23,26,664,	0,137,449,
#Deleted in new
chr3	46407880	46409522	chr3:46407880-46409522	1	+	46408079	46409114	789624	1	1642,	0,
#Partially deleted in new
chr3	46409513	46412997	chr3:46409513-46412997	0	+	46409513	46409513	8553170	2	167,543,	0,2941,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	46435644	46465163	chr3:46435644-46465163	3	-	46436194	46464867	0	17	585,190,185,68,142,156,54,91,155,175,179,56,148,183,109,164,339,	0,2295,3651,5771,7796,9636,10795,11663,13218,14209,14850,18660,19650,20151,20645,24011,29180,
#Partially deleted in new
chr3	46436018	46463671	chr3:46436018-46463671	1	-	46436194	46459730	0	17	211,190,185,68,142,156,54,91,155,175,179,56,148,183,109,164,228,	0,1921,3277,5397,7422,9262,10421,11289,12844,13835,14476,18286,19276,19777,20271,23637,27425,
#Partially deleted in new
chr3	46436192	46464868	chr3:46436192-46464868	1	-	46436194	46464867	789624	17	37,190,185,68,142,156,54,91,149,175,179,56,148,183,109,164,44,	0,1747,3103,5223,7248,9088,10247,11115,12676,13661,14302,18112,19102,19603,20097,23463,28632,
#Partially deleted in new
chr3	46436200	46485234	chr3:46436200-46485234	0	-	46436200	46468255	789624	20	29,190,185,68,142,156,54,91,155,175,179,56,148,183,109,164,68,149,106,249,	0,1739,3095,5215,7240,9080,10239,11107,12662,13653,14294,18104,19094,19595,20089,23455,32051,33246,34160,48785,
#Partially deleted in new
chr3	46438033	46441905	chr3:46438033-46441905	0	-	46438033	46438033	8553170	4	96,185,68,144,	0,1262,3382,3728,
#Partially deleted in new
chr3	46438094	46463644	chr3:46438094-46463644	0	-	46438094	46438094	8553170	4	35,185,68,178,	0,1201,3321,25372,
#Deleted in new
chr3	46454013	46455823	chr3:46454013-46455823	0	-	46454013	46454013	8553170	3	347,148,28,	0,1281,1782,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	46455428	46464905	chr3:46455428-46464905	0	-	46455428	46464867	789624	6	14,183,109,164,33,81,	0,367,861,4227,5136,9396,
#Partially deleted in new
chr3	46459656	46485223	chr3:46459656-46485223	0	-	46459656	46459656	8553170	3	163,68,238,	0,8595,25329,
#Deleted in new
chr3	46497490	46500949	chr3:46497490-46500949	3	+	46498062	46500899	789624	2	727,594,	0,2865,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	46515422	46566550	chr3:46515422-46566550	1	-	46519013	46551591	789624	9	3641,137,156,146,137,157,208,144,374,	0,6099,12003,14482,17350,23622,29623,36044,50754,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	46518348	46580099	chr3:46518348-46580099	3	-	46519013	46551591	789624	9	715,137,156,146,137,157,208,144,163,	0,3173,9077,11556,14424,20696,26697,33118,61588,
#Partially deleted in new
chr3	46545150	46566524	chr3:46545150-46566524	0	-	46545150	46545150	8553170	2	103,348,	0,21026,
#Partially deleted in new
chr3	46551107	46566234	chr3:46551107-46566234	0	-	46551107	46551107	8553170	2	503,58,	0,15069,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	46557397	46559688	chr3:46557397-46559688	1	+	46557397	46557397	8553170	1	2291,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	46557403	46559694	chr3:46557403-46559694	3	+	46557403	46557403	789624	3	28,62,543,	0,270,1748,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	46574533	46581860	chr3:46574533-46581860	1	+	46579107	46581250	789624	6	50,53,135,115,110,729,	0,4561,4698,5205,5417,6598,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	46577236	46582463	chr3:46577236-46582463	3	+	46577969	46581250	789624	6	768,53,135,115,110,1332,	0,1858,1995,2502,2714,3895,
#Partially deleted in new
chr3	46577747	46579936	chr3:46577747-46579936	0	+	46577747	46577747	8553170	4	257,53,135,198,	0,1347,1484,1991,
#Partially deleted in new
chr3	46577764	46579642	chr3:46577764-46579642	0	+	46577764	46577764	8553170	3	240,53,411,	0,1330,1467,
#Deleted in new
chr3	46579141	46579779	chr3:46579141-46579779	0	+	46579141	46579141	8553170	2	225,41,	0,597,
#Partially deleted in new
chr3	46581149	46617226	chr3:46581149-46617226	3	+	46581149	46582586	789624	4	45,150,52,44,	0,1429,15435,36033,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	46612434	46626543	chr3:46612434-46626543	3	+	46612665	46625218	789624	3	264,146,1416,	0,4748,12693,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	46612434	46626543	chr3:46612434-46626543	1	+	46617185	46625218	789624	3	264,146,1416,	0,4748,12693,
#Deleted in new
chr3	46650509	46650590	chr3:46650509-46650590	3	+	46650509	46650509	8553170	1	81,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	46668996	46677455	chr3:46668996-46677455	0	-	46668996	46668996	8553170	9	2068,97,150,62,43,1411,158,381,61,	0,2491,2887,3143,4342,5569,7248,7645,8398,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr3	46669188	46693701	chr3:46669188-46693701	3	-	46670983	46689440	789624	26	1876,97,150,62,43,174,69,158,97,174,131,78,112,162,99,66,197,67,59,120,132,166,66,199,128,59,	0,2299,2695,2951,4150,5377,6429,7056,7453,7660,9070,10021,11241,12057,12311,12840,13941,14593,14800,16336,17119,17794,18430,18909,20149,24454,
#Partially deleted in new
chr3	46670281	46693704	chr3:46670281-46693704	0	-	46679223	46689440	789624	26	783,97,150,62,43,174,359,158,97,174,131,78,112,162,95,66,197,67,59,120,132,166,66,199,128,62,	0,1206,1602,1858,3057,4284,5336,5963,6360,6567,7977,8928,10148,10964,11222,11747,12848,13500,13707,15243,16026,16701,17337,17816,19056,23361,
#Partially deleted in new
chr3	46670564	46693653	chr3:46670564-46693653	1	-	46670983	46689440	789624	26	500,97,150,62,43,174,69,158,97,174,131,78,112,162,99,66,197,67,59,120,132,166,66,199,128,165,	0,923,1319,1575,2774,4001,5053,5680,6077,6284,7694,8645,9865,10681,10935,11464,12565,13217,13424,14960,15743,16418,17054,17533,18773,22924,
#Partially deleted in new
chr3	46670571	46677409	chr3:46670571-46677409	0	-	46670571	46670571	8553170	11	493,97,150,62,43,174,69,158,97,174,230,	0,916,1312,1568,2767,3994,5046,5673,6070,6277,6608,
#Partially deleted in new
chr3	46670598	46693676	chr3:46670598-46693676	0	-	46670598	46670598	8553170	22	466,97,150,62,43,1837,97,174,131,2198,74,66,197,67,59,120,132,166,66,199,128,34,	0,889,1285,1541,2740,3967,6043,6250,7660,8611,10901,11430,12531,13183,13390,14926,15709,16384,17020,17499,18739,23044,
#Partially deleted in new
chr3	46670598	46693681	chr3:46670598-46693681	0	-	46670598	46670598	8553170	22	466,97,150,62,43,1837,97,174,131,2198,99,66,197,67,59,120,132,166,66,199,128,39,	0,889,1285,1541,2740,3967,6043,6250,7660,8611,10901,11430,12531,13183,13390,14926,15709,16384,17020,17499,18739,23044,
#Partially deleted in new
chr3	46670599	46688191	chr3:46670599-46688191	0	-	46682083	46688191	789624	22	465,97,150,62,43,1837,97,174,131,78,112,162,99,66,193,67,59,120,132,166,66,94,	0,888,1284,1540,2739,3966,6042,6249,7659,8610,9830,10646,10900,11429,12534,13182,13389,14925,15708,16383,17019,17498,
#Partially deleted in new
chr3	46670783	46674698	chr3:46670783-46674698	0	-	46670783	46670783	8553170	5	281,546,62,43,133,	0,704,1356,2555,3782,
#Partially deleted in new
chr3	46671487	46674593	chr3:46671487-46674593	0	-	46671487	46671487	8553170	5	281,150,62,43,28,	0,396,652,1851,3078,
#Partially deleted in new
chr3	46694527	46710853	chr3:46694527-46710853	1	+	46705855	46709688	789624	4	91,118,150,1275,	0,11262,14598,15051,
#Deleted in new
chr3	46701311	46710886	chr3:46701311-46710886	3	+	46701487	46709688	789624	4	269,118,150,1308,	0,4478,7814,8267,
#Deleted in new
chr3	46701332	46710886	chr3:46701332-46710886	1	+	46701487	46709688	789624	4	248,118,150,1308,	0,4457,7793,8246,
#Partially deleted in new
chr3	46712114	46717907	chr3:46712114-46717907	3	-	46712245	46717824	789624	6	368,167,284,163,201,189,	0,786,2103,3420,5322,5604,
#Partially deleted in new
chr3	46712114	46812574	chr3:46712114-46812574	3	-	46712245	46717824	789624	11	368,167,284,163,201,588,60,27,161,588,353,	0,786,2103,3420,5322,5604,7829,36510,42373,43927,100107,
#Partially deleted in new
chr3	46719582	46736429	chr3:46719582-46736429	7	-	46719582	46719582	16724991	4	421,260,178,123,	0,14053,14482,16724,
#Partially deleted in new
chr3	46719748	46736388	chr3:46719748-46736388	5	-	46719748	46719748	16724991	4	255,260,178,82,	0,13887,14316,16558,
#Deleted in new
chr3	46742091	46744755	chr3:46742091-46744755	3	-	46742349	46744755	789624	4	492,161,275,113,	0,821,1774,2551,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	46742091	46812558	chr3:46742091-46812558	3	-	46743036	46744755	789624	10	492,170,174,148,27,161,263,588,768,337,	0,821,1875,2551,6533,12396,13318,13950,69014,70130,
#Deleted in new
chr3	46742349	46744755	chr3:46742349-46744755	1	-	46742349	46744755	789624	4	234,170,170,113,	0,563,1621,2293,
#Deleted in new
chr3	46798122	46798390	chr3:46798122-46798390	7	+	46798122	46798122	16724991	1	268,	0,
#Partially deleted in new
chr3	46809358	46812558	chr3:46809358-46812558	7	-	46809358	46809358	16724991	5	231,155,266,157,337,	0,797,1747,2358,2863,
#Deleted in new
chr3	46809497	46811341	chr3:46809497-46811341	4	-	46809497	46809497	16724991	2	92,236,	0,1608,
#Deleted in new
chr3	46829541	46833823	chr3:46829541-46833823	1	-	46830464	46833769	789624	3	952,215,113,	0,3450,4169,
#Deleted in new
chr3	46830403	46834095	chr3:46830403-46834095	3	-	46830403	46834095	789624	5	90,161,260,157,214,	0,1472,2543,3116,3478,
#Partially deleted in new
chr3	46857871	46863483	chr3:46857871-46863483	3	-	46858243	46863390	0	7	230,42,78,174,150,28,222,	0,359,512,1603,2804,3088,5390,
#Partially deleted in new
chr3	46857871	46863442	chr3:46857871-46863442	1	-	46858243	46863390	0	6	401,78,174,150,28,181,	0,512,1603,2804,3088,5390,
#Partially deleted in new
chr3	46860978	46882169	chr3:46860978-46882169	0	-	46860978	46863390	789624	4	9,135,211,96,	0,2283,5411,21095,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	46877745	46903794	chr3:46877745-46903794	3	+	46883559	46903656	0	16	98,57,123,103,135,111,119,95,196,154,61,67,95,142,42,525,	0,3316,5766,16161,17989,20109,20328,20632,20916,21557,23279,23668,24020,24780,25003,25524,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	46880244	46903795	chr3:46880244-46903795	1	+	46883559	46903656	0	16	44,57,123,103,135,111,119,95,196,154,61,67,95,142,42,526,	0,817,3267,13662,15490,17610,17829,18133,18417,19058,20780,21169,21521,22281,22504,23025,
#Partially deleted in new
chr3	46882179	46903455	chr3:46882179-46903455	0	+	46883559	46903455	789624	15	285,123,103,135,111,119,95,196,154,61,67,95,142,42,186,	0,1332,11727,13555,15675,15894,16198,16482,17123,18845,19234,19586,20346,20569,21090,
#Partially deleted in new
chr3	46882248	46903755	chr3:46882248-46903755	1	+	46883559	46903656	0	15	18,123,103,135,111,119,95,196,154,61,67,95,142,42,486,	0,1263,11658,13486,15606,15825,16129,16413,17054,18776,19165,19517,20277,20500,21021,
#Partially deleted in new
chr3	46883356	46903794	chr3:46883356-46903794	1	+	46883559	46903656	0	14	278,103,135,111,119,95,196,154,61,67,95,142,42,525,	0,10550,12378,14498,14717,15021,15305,15946,17668,18057,18409,19169,19392,19913,
#Partially deleted in new
chr3	46883356	46903795	chr3:46883356-46903795	0	+	46883559	46901427	789624	13	278,103,135,111,119,95,196,154,67,95,142,42,526,	0,10550,12378,14498,14717,15021,15305,15946,18057,18409,19169,19392,19913,
#Partially deleted in new
chr3	46892720	46898734	chr3:46892720-46898734	0	+	46892720	46892720	8553170	7	95,103,135,111,119,95,73,	0,1186,3014,5134,5353,5657,5941,
#Deleted in new
chr3	46902598	46903799	chr3:46902598-46903799	0	+	46902598	46903656	789624	4	69,42,51,530,	0,150,302,671,
#Deleted in new
chr3	46918806	46918935	chr3:46918806-46918935	7	-	46918806	46918806	16724991	1	129,	0,
#Partially deleted in new
chr3	46921725	46981982	chr3:46921725-46981982	3	-	46922056	46976732	789624	9	414,77,35,62,80,68,207,103,51,	0,510,1603,1881,3730,19272,54911,55212,60206,
#Partially deleted in new
chr3	46921730	46982010	chr3:46921730-46982010	1	-	46922056	46976771	789624	8	409,77,35,62,80,68,207,79,	0,505,1598,1876,3725,19267,54906,60201,
#Deleted in new
chr3	46921747	46924159	chr3:46921747-46924159	0	-	46921747	46921747	8553170	1	2412,	0,
#Partially deleted in new
chr3	46922304	46976501	chr3:46922304-46976501	0	-	46922304	46922304	789624	6	8,35,62,80,68,149,	0,1024,1302,3151,18693,54048,
#Partially deleted in new
chr3	46923042	46976759	chr3:46923042-46976759	0	-	46923042	46923042	8553170	4	626,80,68,123,	0,2413,17955,53594,
#Partially deleted in new
chr3	46923142	46976481	chr3:46923142-46976481	0	-	46923142	46923142	8553170	5	221,62,80,68,129,	0,464,2313,17855,53210,
#Partially deleted in new
chr3	46923645	46981965	chr3:46923645-46981965	0	-	46923645	46976732	789624	5	23,80,68,207,34,	0,1810,17352,52991,58286,
#Partially deleted in new
chr3	46924919	46976745	chr3:46924919-46976745	0	-	46924919	46924919	8553170	3	616,68,109,	0,16078,51717,
#Partially deleted in new
chr3	46925289	46976437	chr3:46925289-46976437	0	-	46925289	46925289	8553170	3	246,68,85,	0,15708,51063,
#Partially deleted in new
chr3	46925330	46976483	chr3:46925330-46976483	0	-	46925330	46925330	8553170	4	205,68,146,131,	0,15667,40653,51022,
#Partially deleted in new
chr3	46925455	46979561	chr3:46925455-46979561	0	-	46925455	46976732	789624	4	80,68,144,88,	0,15542,51181,54018,
#Partially deleted in new
chr3	46940614	46976757	chr3:46940614-46976757	0	-	46940614	46940614	8553170	2	451,121,	0,36022,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	46976006	46982010	chr3:46976006-46982010	0	-	46976006	46976006	8553170	2	774,79,	0,5925,
#Partially deleted in new
chr3	46979682	47009703	chr3:46979682-47009703	3	+	46979861	47009320	789624	54	230,89,129,82,122,83,86,283,107,81,84,99,602,133,120,322,83,93,175,134,160,103,163,159,160,86,516,179,160,138,369,150,158,125,136,161,317,96,125,141,131,110,118,98,117,90,110,173,95,117,159,149,136,485,	0,8986,9159,9402,9577,9828,11536,11723,12157,12792,14254,14772,15349,16031,16249,16588,17068,17271,17576,17878,18384,18780,19034,19276,19632,19947,20206,21318,21596,22006,22237,22688,22962,23274,23491,24133,24394,24812,25289,25498,25806,26055,26263,26482,26650,27383,27558,27842,28133,28387,28600,28837,29306,29536,
#Deleted in new
chr3	46995320	47009556	chr3:46995320-47009556	0	+	46995320	47009320	789624	40	313,133,120,322,83,93,175,134,160,103,163,160,209,179,160,138,369,150,158,125,136,161,317,96,125,141,131,110,118,98,117,90,110,173,95,117,159,149,136,338,	0,393,611,950,1430,1633,1938,2240,2746,3142,3396,3994,4875,5680,5958,6368,6599,7050,7324,7636,7853,8495,8756,9174,9651,9860,10168,10417,10625,10844,11012,11745,11920,12204,12495,12749,12962,13199,13668,13898,
#Deleted in new
chr3	47000949	47001969	chr3:47000949-47001969	0	+	47000949	47000949	8553170	3	489,138,50,	0,739,970,
#Deleted in new
chr3	47002032	47009548	chr3:47002032-47009548	0	+	47002032	47009320	789624	23	256,150,158,125,136,161,317,96,125,141,131,110,118,98,117,110,173,95,117,159,149,136,330,	0,338,612,924,1141,1783,2044,2462,2939,3148,3456,3705,3913,4132,4300,5208,5492,5783,6037,6250,6487,6956,7186,
#Deleted in new
chr3	47004171	47005783	chr3:47004171-47005783	0	+	47004171	47005186	789624	5	222,96,141,131,46,	0,323,1009,1317,1566,
#Deleted in new
chr3	47004618	47006262	chr3:47004618-47006262	0	+	47004618	47004618	8553170	6	478,141,131,110,118,98,	0,562,870,1119,1327,1546,
#Deleted in new
chr3	47005280	47007674	chr3:47005280-47007674	0	+	47005280	47007674	789624	7	41,131,110,118,98,117,150,	0,208,457,665,884,1052,2244,
#Deleted in new
chr3	47007050	47009127	chr3:47007050-47009127	0	+	47007050	47007050	8553170	6	300,95,117,159,149,139,	0,765,1019,1232,1469,1938,
#Deleted in new
chr3	47007116	47008104	chr3:47007116-47008104	0	+	47007116	47007116	8553170	3	39,457,289,	0,124,699,
#Deleted in new
chr3	47007322	47008600	chr3:47007322-47008600	0	+	47007322	47007322	8553170	5	375,95,117,159,81,	0,493,747,960,1197,
#Deleted in new
chr3	47007762	47008398	chr3:47007762-47008398	0	+	47007762	47007762	8553170	2	424,116,	0,520,
#Deleted in new
chr3	47010823	47013465	chr3:47010823-47013465	7	+	47010823	47010823	16724991	3	761,191,633,	0,1497,2009,
#Deleted in new
chr3	47011541	47013146	chr3:47011541-47013146	5	+	47011541	47011541	16724991	4	43,191,143,314,	0,779,1081,1291,
#Partially deleted in new
chr3	47016428	47123787	chr3:47016428-47123787	0	-	47103419	47123787	789624	19	826,102,81,112,140,135,670,184,49,168,663,120,135,127,98,78,129,132,3606,	0,1209,3331,21237,26132,30058,40392,45734,50641,64487,67291,69766,71684,81526,85029,86917,97447,100194,103753,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr3	47016435	47124250	chr3:47016435-47124250	0	-	47119752	47124250	789624	19	819,102,81,112,140,135,670,184,49,663,120,135,127,98,78,129,132,329,4069,	0,1202,3324,21230,26125,30051,40385,45727,50634,67284,69759,71677,81519,85022,86910,97440,100187,103016,103746,
#Partially deleted in new
chr3	47016688	47163967	chr3:47016688-47163967	3	-	47017092	47163924	0	21	566,102,81,112,140,135,670,184,49,663,120,135,127,98,78,124,129,132,4367,16,114,	0,949,3071,20977,25872,29798,40132,45474,50381,67031,69506,71424,81266,84769,86657,89308,97187,99934,103493,109959,147165,
#Partially deleted in new
chr3	47016688	47123535	chr3:47016688-47123535	0	-	47064613	47123535	789624	20	566,102,81,112,140,135,670,184,76,49,663,120,135,127,98,78,124,129,132,3354,	0,949,3071,20977,25872,29798,40132,45474,47866,50381,67031,69506,71424,81266,84769,86657,89308,97187,99934,103493,
#Deleted in new
chr3	47028854	47029030	chr3:47028854-47029030	7	+	47028854	47028854	16724991	1	176,	0,
#Partially deleted in new
chr3	47037664	47047027	chr3:47037664-47047027	0	-	47037664	47037664	8553170	3	113,140,541,	0,4896,8822,
#Partially deleted in new
chr3	47062159	47083946	chr3:47062159-47083946	0	-	47062159	47062159	8553170	4	187,49,283,227,	0,4910,18641,21560,
#Partially deleted in new
chr3	47066991	47120432	chr3:47066991-47120432	1	-	47067055	47120285	789624	13	127,663,120,137,7,3,115,98,78,124,129,132,251,	0,16728,19203,21121,30963,30971,30975,34466,36354,39005,46884,49631,53190,
#Partially deleted in new
chr3	47088183	47098451	chr3:47088183-47098451	0	-	47088183	47088183	8553170	2	64,497,	0,9771,
#Partially deleted in new
chr3	47120482	47163576	chr3:47120482-47163576	0	-	47120482	47124503	789624	3	4066,16,149,	0,6165,42945,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	47164496	47246601	chr3:47164496-47246601	3	+	47164496	47164496	789624	7	101,228,97,103,166,580,3623,	0,4672,67270,71560,73907,75118,78482,
#Partially deleted in new
chr3	47228025	47282847	chr3:47228025-47282847	1	-	47228651	47277374	0	21	677,105,116,177,215,195,134,91,56,105,69,78,65,148,93,84,225,107,166,98,353,	0,7487,8008,8417,12775,15025,16765,17395,18171,19347,19992,29457,36260,37704,38950,39154,43211,45526,47299,49256,54469,
#Partially deleted in new
chr3	47228394	47283451	chr3:47228394-47283451	3	-	47228651	47277374	0	22	308,105,116,177,215,195,134,91,56,105,69,78,65,148,93,84,225,107,166,98,625,51,	0,7118,7639,8048,12406,14656,16396,17026,17802,18978,19623,29088,35891,37335,38581,38785,42842,45157,46930,48887,54100,55006,
#Partially deleted in new
chr3	47228396	47282847	chr3:47228396-47282847	1	-	47228651	47277374	0	20	306,105,116,177,215,134,91,56,105,69,78,65,148,93,84,225,107,166,98,353,	0,7116,7637,8046,12404,16394,17024,17800,18976,19621,29086,35889,37333,38579,38783,42840,45155,46928,48885,54098,
#Partially deleted in new
chr3	47228651	47282577	chr3:47228651-47282577	1	-	47228651	47277374	0	22	51,105,116,177,215,195,134,91,56,105,69,78,65,148,93,84,225,107,166,98,246,83,	0,6861,7382,7791,12149,14399,16139,16769,17545,18721,19366,28831,35634,37078,38324,38528,42585,44900,46673,48630,53488,53843,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr3	47239562	47282847	chr3:47239562-47282847	0	-	47239562	47239562	8553170	18	353,215,195,134,91,56,105,69,78,65,148,93,84,225,107,166,98,353,	0,1238,3488,5228,5858,6634,7810,8455,17920,24723,26167,27413,27617,31674,33989,35762,37719,42932,
#Partially deleted in new
chr3	47246196	47282537	chr3:47246196-47282537	0	-	47263878	47277374	789624	14	56,105,186,78,67,65,148,93,84,225,107,166,98,43,	0,1176,1821,11286,17636,18089,19533,20779,20983,25040,27355,29128,31085,36298,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	47250522	47250626	chr3:47250522-47250626	3	-	47250522	47250522	8553170	1	104,	0,
#Partially deleted in new
chr3	47263638	47265788	chr3:47263638-47265788	0	-	47263638	47263638	8553170	2	712,59,	0,2091,
#Partially deleted in new
chr3	47265863	47277380	chr3:47265863-47277380	0	-	47265863	47265863	8553170	6	182,93,84,225,166,99,	0,1112,1316,5373,9461,11418,
#Partially deleted in new
chr3	47267040	47282752	chr3:47267040-47282752	0	-	47267040	47277374	789624	6	28,84,107,166,98,258,	0,139,6511,8284,10241,15454,
#Partially deleted in new
chr3	47275227	47282518	chr3:47275227-47282518	1	-	47275307	47277374	789624	3	263,98,379,	0,2054,6912,
#Partially deleted in new
chr3	47275227	47282766	chr3:47275227-47282766	1	-	47275307	47277374	789624	3	263,98,272,	0,2054,7267,
#Partially deleted in new
chr3	47275251	47282198	chr3:47275251-47282198	1	-	47275307	47280988	789624	4	239,98,244,59,	0,2030,5700,6888,
#Partially deleted in new
chr3	47277093	47282766	chr3:47277093-47282766	0	-	47277093	47277093	8553170	2	286,272,	0,5401,
#Partially deleted in new
chr3	47282916	47322707	chr3:47282916-47322707	0	+	47282965	47297624	789624	4	178,111,131,140,	0,14645,36736,39651,
#Partially deleted in new
chr3	47282945	47346816	chr3:47282945-47346816	3	+	47282965	47343941	789624	10	149,131,141,199,161,137,223,105,112,3262,	0,36707,39622,47005,50211,51737,53589,57626,59773,60609,
#Partially deleted in new
chr3	47282945	47329992	chr3:47282945-47329992	0	+	47282965	47329992	789624	4	149,131,141,42,	0,36707,39622,47005,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	47282945	47338822	chr3:47282945-47338822	0	+	47282945	47282945	8553170	7	149,131,141,199,161,137,2288,	0,36707,39622,47005,50211,51737,53589,
#Partially deleted in new
chr3	47282946	47344577	chr3:47282946-47344577	0	+	47282965	47322618	789624	9	148,141,199,161,137,223,105,112,1023,	0,39621,47004,50210,51736,53588,57625,59772,60608,
#Partially deleted in new
chr3	47282958	47287458	chr3:47282958-47287458	0	+	47282958	47282958	8553170	2	136,239,	0,4261,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	47346949	47349073	chr3:47346949-47349073	3	+	47346949	47346949	8553170	1	2124,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	47379088	47380999	chr3:47379088-47380999	3	-	47379088	47379088	8553170	1	1911,	0,
#Partially deleted in new
chr3	47381010	47413435	chr3:47381010-47413435	0	+	47381096	47405040	789624	24	170,75,77,50,132,81,132,48,57,59,80,115,66,146,312,155,152,180,1759,185,105,139,114,730,	0,15132,23994,24738,24904,25314,25470,25692,26119,26298,26494,26686,26879,27334,27765,28152,28406,28644,28917,30772,31083,31272,31503,31695,
#Partially deleted in new
chr3	47381013	47406392	chr3:47381013-47406392	0	+	47381096	47406392	789624	6	167,128,77,50,102,68,	0,23638,23991,24735,24931,25311,
#Partially deleted in new
chr3	47381019	47413441	chr3:47381019-47413441	3	+	47381096	47413185	0	25	161,75,128,77,50,132,81,132,48,57,59,80,115,66,146,312,155,152,180,1759,185,105,139,114,736,	0,15123,23632,23985,24729,24895,25305,25461,25683,26110,26289,26485,26677,26870,27325,27756,28143,28397,28635,28908,30763,31074,31263,31494,31686,
#Partially deleted in new
chr3	47381069	47396291	chr3:47381069-47396291	0	+	47381069	47381069	8553170	2	111,149,	0,15073,
#Deleted in new
chr3	47405279	47406750	chr3:47405279-47406750	0	+	47405279	47405279	8553170	5	519,102,81,132,48,	0,665,1045,1201,1423,
#Deleted in new
chr3	47409297	47410066	chr3:47409297-47410066	0	+	47409297	47409297	8553170	2	537,139,	0,630,
#Partially deleted in new
chr3	47413693	47475955	chr3:47413693-47475955	1	-	47417787	47425600	789624	22	406,207,81,167,83,86,523,116,202,96,183,99,95,113,127,173,106,221,158,130,220,157,	0,486,878,1133,1404,3428,3610,4440,4627,4961,6896,7237,8748,10239,11791,12303,13463,13753,14819,21314,29178,62105,
#Partially deleted in new
chr3	47413712	47476113	chr3:47413712-47476113	3	-	47413853	47442993	789624	23	387,207,81,167,83,86,523,116,202,189,377,219,99,95,113,127,173,106,221,158,130,220,315,	0,467,859,1114,1385,3409,3591,4421,4608,4942,5615,6841,7218,8729,10220,11772,12284,13444,13734,14800,21295,29159,62086,
#Partially deleted in new
chr3	47413712	47475937	chr3:47413712-47475937	0	-	47420991	47442993	789624	18	387,207,81,167,83,86,520,116,202,189,377,219,99,95,113,130,220,139,	0,467,859,1114,1385,3409,3591,4421,4608,4942,5615,6841,7218,8729,10220,21295,29159,62086,
#Partially deleted in new
chr3	47413712	47475955	chr3:47413712-47475955	0	-	47426055	47442993	789624	20	387,207,81,167,83,86,520,116,202,189,377,219,99,95,113,127,173,130,220,157,	0,467,859,1114,1385,3409,3591,4421,4608,4942,5615,6841,7218,8729,10220,11772,12284,21295,29159,62086,
#Partially deleted in new
chr3	47413720	47443092	chr3:47413720-47443092	1	-	47413853	47442993	789624	15	379,207,81,167,83,86,520,116,202,189,377,219,99,31,194,	0,459,851,1106,1377,3401,3583,4413,4600,4934,5607,6833,7210,8721,29178,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr3	47413735	47472830	chr3:47413735-47472830	1	-	47413853	47442993	8553170	24	364,207,81,167,83,86,523,116,202,189,377,219,99,95,113,127,173,106,221,158,130,220,72,60,	0,444,836,1091,1362,3386,3568,4398,4585,4919,5592,6818,7195,8706,10197,11749,12261,13421,13711,14777,21272,29136,52640,59035,
#Partially deleted in new
chr3	47419384	47475937	chr3:47419384-47475937	0	-	47422530	47442993	789624	7	320,219,99,95,130,220,139,	0,1169,1546,3057,15623,23487,56414,
#Deleted in new
chr3	47420618	47421365	chr3:47420618-47421365	0	-	47420618	47420618	8553170	2	154,435,	0,312,
#Deleted in new
chr3	47420653	47422793	chr3:47420653-47422793	0	-	47420653	47420653	8553170	3	119,99,352,	0,277,1788,
#Partially deleted in new
chr3	47425274	47427225	chr3:47425274-47427225	0	-	47425274	47425274	8553170	3	337,173,69,	0,722,1882,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	47427638	47429026	chr3:47427638-47429026	0	-	47427638	47427638	8553170	2	29,514,	0,874,
#Partially deleted in new
chr3	47428512	47475597	chr3:47428512-47475597	0	-	47428512	47442993	789624	4	158,130,220,175,	0,6495,14359,46910,
#Partially deleted in new
chr3	47428525	47443302	chr3:47428525-47443302	0	-	47428525	47442993	789624	3	145,130,431,	0,6482,14346,
#Partially deleted in new
chr3	47428560	47443094	chr3:47428560-47443094	0	-	47428560	47428560	8553170	3	110,213,223,	0,6364,14311,
#Partially deleted in new
chr3	47434852	47443094	chr3:47434852-47443094	0	-	47434852	47434852	8553170	2	285,223,	0,8019,
#Partially deleted in new
chr3	47434995	47477126	chr3:47434995-47477126	0	-	47434995	47442993	789624	3	142,220,188,	0,7876,41943,
#Deleted in new
chr3	47469776	47469987	chr3:47469776-47469987	7	+	47469776	47469776	16724991	1	211,	0,
#Partially deleted in new
chr3	47495639	47513761	chr3:47495639-47513761	3	-	47496068	47513590	789624	7	558,147,202,119,71,79,225,	0,2646,6010,8690,14544,15508,17897,
#Partially deleted in new
chr3	47495640	47513709	chr3:47495640-47513709	0	-	47504398	47513590	789624	6	557,147,202,119,79,173,	0,2645,6009,8689,15507,17896,
#Partially deleted in new
chr3	47495945	47511215	chr3:47495945-47511215	1	-	47496068	47504433	789624	6	252,147,202,119,106,68,	0,2340,5704,8384,14203,15202,
#Partially deleted in new
chr3	47496028	47513413	chr3:47496028-47513413	1	-	47496068	47504433	789624	7	169,147,202,119,71,79,93,	0,2257,5621,8301,14155,15119,17292,
#Partially deleted in new
chr3	47498265	47511378	chr3:47498265-47511378	0	-	47498265	47504433	789624	6	167,202,119,71,79,67,	0,3384,6064,11918,12882,13046,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	47498285	47513381	chr3:47498285-47513381	0	-	47498285	47504433	789624	6	147,202,119,71,79,390,	0,3364,6044,11898,12862,14706,
#Partially deleted in new
chr3	47498287	47513390	chr3:47498287-47513390	0	-	47503346	47504433	789624	7	145,202,325,119,71,79,70,	0,3362,4837,6042,11896,12860,15033,
#Deleted in new
chr3	47499840	47500090	chr3:47499840-47500090	5	+	47499840	47499840	16724991	1	250,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	47499840	47500407	chr3:47499840-47500407	7	+	47499840	47499840	16724991	1	567,	0,
#Partially deleted in new
chr3	47501526	47511226	chr3:47501526-47511226	0	-	47501526	47501526	8553170	4	325,119,71,79,	0,2803,8657,9621,
#Partially deleted in new
chr3	47501615	47511315	chr3:47501615-47511315	0	-	47501615	47504433	789624	4	236,119,71,168,	0,2714,8568,9532,
#Partially deleted in new
chr3	47501649	47513702	chr3:47501649-47513702	0	-	47501649	47501649	8553170	3	202,119,166,	0,2680,11887,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	47501658	47513339	chr3:47501658-47513339	0	-	47501658	47504433	789624	5	193,119,71,79,117,	0,2671,8525,9489,11564,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	47501715	47513342	chr3:47501715-47513342	0	-	47501715	47504433	789624	5	136,119,71,79,152,	0,2614,8468,9432,11475,
#Partially deleted in new
chr3	47504193	47513709	chr3:47504193-47513709	0	-	47504193	47504193	8553170	4	255,71,79,173,	0,5990,6954,9343,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	47509955	47513711	chr3:47509955-47513711	0	-	47509955	47509955	8553170	3	299,79,175,	0,1192,3581,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	47511768	47513361	chr3:47511768-47513361	0	-	47511768	47511768	8553170	2	506,43,	0,1550,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	47560228	47560524	chr3:47560228-47560524	3	-	47560228	47560228	8553170	1	296,	0,
#Partially deleted in new
chr3	47562238	47580792	chr3:47562238-47580792	1	-	47562599	47578693	789624	5	523,76,189,1096,2196,	0,6913,10447,14594,16358,
#Partially deleted in new
chr3	47562238	47580792	chr3:47562238-47580792	3	-	47562599	47578693	789624	5	523,157,189,1096,2196,	0,6832,10447,14594,16358,
#Partially deleted in new
chr3	47562238	47578133	chr3:47562238-47578133	1	-	47562599	47577611	789624	4	523,76,189,1301,	0,6913,10447,14594,
#Partially deleted in new
chr3	47562246	47578869	chr3:47562246-47578869	1	-	47562709	47578693	789624	4	515,189,1096,273,	0,10439,14586,16350,
#Deleted in new
chr3	47577686	47580240	chr3:47577686-47580240	0	-	47577686	47577686	8553170	2	242,351,	0,2203,
#Partially deleted in new
chr3	47585271	47781917	chr3:47585271-47781917	3	-	47588208	47781797	0	28	3035,177,262,135,155,115,56,162,259,60,114,154,114,72,122,38,60,125,122,126,76,70,70,93,82,86,120,315,	0,5389,24794,36935,49918,50750,53453,76022,77062,85386,90203,91357,92926,95165,100777,104115,107969,116006,121137,125411,129143,135394,143753,150762,152757,160636,187545,196331,
#Partially deleted in new
chr3	47587589	47782106	chr3:47587589-47782106	0	-	47587589	47587589	8553170	28	717,177,262,135,155,115,56,162,259,60,114,154,114,72,122,38,60,125,122,126,76,70,70,93,82,86,120,85,	0,3071,22476,34617,47600,48432,51135,73704,74744,83068,87885,89039,90608,92847,98459,101797,105651,113688,118819,123093,126825,133076,141435,148444,150439,158318,185227,194432,
#Partially deleted in new
chr3	47590805	47610798	chr3:47590805-47610798	0	-	47590805	47590805	8553170	3	32,262,274,	0,19260,19719,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	47601714	47604677	chr3:47601714-47604677	3	-	47601714	47601714	8553170	2	95,1333,	0,1630,
#Deleted in new
chr3	47663625	47663934	chr3:47663625-47663934	7	+	47663625	47663625	16724991	1	309,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	47670349	47678365	chr3:47670349-47678365	0	-	47670349	47670349	8553170	4	368,114,154,168,	0,5125,6279,7848,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	47678195	47701654	chr3:47678195-47701654	0	-	47678195	47678195	8553170	6	116,72,122,38,60,377,	0,2241,7853,11191,15045,23082,
#Partially deleted in new
chr3	47680222	47701402	chr3:47680222-47701402	0	-	47680222	47680222	8553170	5	286,122,38,60,125,	0,5826,9164,13018,21055,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	47729024	47746405	chr3:47729024-47746405	0	-	47729024	47729024	8553170	5	70,93,82,86,81,	0,7009,9004,16883,17300,
#Partially deleted in new
chr3	47729036	47781881	chr3:47729036-47781881	0	-	47736125	47781797	789624	5	58,93,86,120,279,	0,6997,16871,43780,52566,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	47802908	47816972	chr3:47802908-47816972	0	+	47802908	47802908	789624	4	304,95,55,1010,	0,2417,7748,13054,
#Partially deleted in new
chr3	47802927	47850193	chr3:47802927-47850193	3	+	47810683	47850120	0	22	285,95,55,96,131,111,302,121,150,153,837,76,105,176,207,82,194,160,158,104,140,327,	0,2398,7729,15094,24419,26096,37949,38689,40178,42772,43237,44345,44504,44853,45252,45541,45696,45992,46264,46523,46702,46939,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	47802949	47822310	chr3:47802949-47822310	0	+	47802949	47802949	8553170	6	263,95,55,96,29,214,	0,2376,7707,15072,16286,19147,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	47803106	47824863	chr3:47803106-47824863	0	+	47810683	47819240	789624	7	106,95,55,96,29,135,97,	0,2219,7550,14915,16129,18990,21660,
#Partially deleted in new
chr3	47803124	47825004	chr3:47803124-47825004	0	+	47803124	47803124	8553170	6	88,95,55,96,29,238,	0,2201,7532,14897,16111,21642,
#Partially deleted in new
chr3	47803133	47850192	chr3:47803133-47850192	0	+	47810683	47819240	789624	23	79,95,55,96,29,131,111,302,121,150,153,837,76,105,176,207,82,194,160,158,104,140,326,	0,2192,7523,14888,16102,24213,25890,37743,38483,39972,42566,43031,44139,44298,44647,45046,45335,45490,45786,46058,46317,46496,46733,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	47803137	47842679	chr3:47803137-47842679	0	+	47810683	47819240	789624	9	75,95,55,96,29,131,111,302,1063,	0,2188,7519,14884,16098,24209,25886,37739,38479,
#Partially deleted in new
chr3	47803164	47850193	chr3:47803164-47850193	1	+	47818077	47850120	789624	23	48,95,55,166,96,131,111,302,121,150,153,837,76,105,176,207,82,194,160,158,104,140,327,	0,2161,7492,12798,14857,24182,25859,37712,38452,39941,42535,43000,44108,44267,44616,45015,45304,45459,45755,46027,46286,46465,46702,
#Partially deleted in new
chr3	47810683	47850195	chr3:47810683-47850195	1	+	47810683	47850120	0	20	28,96,131,111,302,121,150,153,837,76,105,176,207,82,194,160,158,104,140,329,	0,7338,16663,18340,30193,30933,32422,35016,35481,36589,36748,37097,37496,37785,37940,38236,38508,38767,38946,39183,
#Deleted in new
chr3	47818004	47818128	chr3:47818004-47818128	3	+	47818004	47818004	8553170	1	124,	0,
#Partially deleted in new
chr3	47819226	47850195	chr3:47819226-47850195	1	+	47819257	47850120	0	19	38,131,111,302,121,150,153,837,76,105,176,207,82,194,160,158,104,140,329,	0,8120,9797,21650,22390,23879,26473,26938,28046,28205,28554,28953,29242,29397,29693,29965,30224,30403,30640,
#Partially deleted in new
chr3	47825027	47850187	chr3:47825027-47850187	1	+	47825039	47850120	0	19	220,131,111,302,121,150,153,837,76,105,176,207,82,194,160,158,104,140,321,	0,2319,3996,15849,16589,18078,20672,21137,22245,22404,22753,23152,23441,23596,23892,24164,24423,24602,24839,
#Partially deleted in new
chr3	47825911	47829135	chr3:47825911-47829135	0	+	47825911	47825911	8553170	3	221,131,112,	0,1435,3112,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	47827372	47831128	chr3:47827372-47831128	0	+	47827372	47827372	8553170	3	105,111,349,	0,1651,3407,
#Deleted in new
chr3	47845501	47846404	chr3:47845501-47846404	0	+	47845501	47845501	8553170	2	351,240,	0,663,
#Deleted in new
chr3	47847776	47848996	chr3:47847776-47848996	0	+	47847776	47847776	8553170	4	610,82,194,77,	0,692,847,1143,
#Deleted in new
chr3	47849554	47849629	chr3:47849554-47849629	3	+	47849554	47849554	5263520	1	75,	0,
#Partially deleted in new
chr3	47850689	47909267	chr3:47850689-47909267	0	-	47852933	47909267	789624	10	2249,190,113,82,293,60,184,216,107,230,	0,2473,4558,6741,20123,20537,21227,24995,26727,58348,
#Partially deleted in new
chr3	47850695	48088839	chr3:47850695-48088839	1	-	47852791	47998860	789624	18	2243,113,82,93,114,293,60,184,216,107,123,1224,123,114,123,69,242,67,	0,4552,6735,16550,18518,20117,20531,21221,24989,26721,64121,65255,68023,71069,77532,127169,147942,238077,
#Partially deleted in new
chr3	47851093	48088841	chr3:47851093-48088841	1	-	47853031	47998860	789624	21	1946,190,113,82,93,114,293,60,184,216,107,3384,123,1224,123,114,123,69,51,242,69,	0,2069,4154,6337,16152,18120,19719,20133,20823,24591,26323,57944,63723,64857,67625,70671,77134,126771,136289,147544,237679,
#Partially deleted in new
chr3	47851867	48089272	chr3:47851867-48089272	3	-	47853031	47998860	789624	19	1172,190,113,82,93,114,293,60,184,216,107,123,1224,123,114,123,69,242,500,	0,1295,3380,5563,15378,17346,18945,19359,20049,23817,25549,62949,64083,66851,69897,76360,125997,146770,236905,
#Partially deleted in new
chr3	47852144	47892835	chr3:47852144-47892835	1	-	47852791	47892491	789624	8	794,113,82,93,293,184,107,1812,	0,3103,5286,15101,18668,19772,25272,38879,
#Partially deleted in new
chr3	47852619	47891336	chr3:47852619-47891336	0	-	47852791	47891336	789624	9	319,113,82,93,293,60,184,107,313,	0,2628,4811,14626,18193,18607,19297,24797,38404,
#Partially deleted in new
chr3	47855124	47857478	chr3:47855124-47857478	0	-	47855124	47855124	8553170	2	236,48,	0,2306,
#Partially deleted in new
chr3	47869211	47910388	chr3:47869211-47910388	0	-	47869211	47910388	789624	7	116,248,60,184,216,107,1351,	0,1646,2015,2705,6473,8205,39826,
#Partially deleted in new
chr3	47871247	47877765	chr3:47871247-47877765	0	-	47871247	47871247	8553170	3	39,184,349,	0,669,6169,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	47876919	47892575	chr3:47876919-47892575	0	-	47876919	47876919	8553170	2	604,1552,	0,14104,
#Partially deleted in new
chr3	47877326	47928302	chr3:47877326-47928302	0	-	47877326	47877326	8553170	3	197,114,75,	0,44438,50901,
#Partially deleted in new
chr3	47916861	48088801	chr3:47916861-48088801	0	-	47916861	47998860	789624	6	313,123,123,69,242,29,	0,1857,11366,61003,81776,171911,
#Partially deleted in new
chr3	47928272	48016420	chr3:47928272-48016420	0	-	47928272	47998860	789624	6	78,69,51,242,43,87,	0,49592,59110,70365,85202,88061,
#Deleted in new
chr3	47960326	47961081	chr3:47960326-47961081	7	-	47960326	47960326	16724991	1	755,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	47973083	48016412	chr3:47973083-48016412	1	-	47975457	47998860	789624	4	2382,69,242,79,	0,4781,25554,43250,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	47973085	48088824	chr3:47973085-48088824	1	-	47975457	47998860	789624	4	2380,69,242,52,	0,4779,25552,115687,
#Partially deleted in new
chr3	47977928	48089203	chr3:47977928-48089203	0	-	47977928	47998860	789624	3	5,242,240,	0,20709,111035,
#Deleted in new
chr3	48039266	48039490	chr3:48039266-48039490	7	+	48039266	48039266	16724991	1	224,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	48094800	48095105	chr3:48094800-48095105	3	-	48094800	48094800	8553170	1	305,	0,
#Partially deleted in new
chr3	48120668	48121215	chr3:48120668-48121215	7	-	48120668	48120668	16724991	1	547,	0,
#Partially deleted in new
chr3	48157145	48188356	chr3:48157145-48188356	3	-	48158944	48187947	0	15	1940,112,131,99,63,99,174,72,135,120,102,37,43,77,579,	0,2198,7161,8490,8685,10700,17138,20225,20708,23575,25783,26654,27507,29557,30632,
#Partially deleted in new
chr3	48157145	48188356	chr3:48157145-48188356	1	-	48158944	48187947	0	14	1940,112,131,99,63,99,174,72,135,102,37,43,77,579,	0,2198,7161,8490,8685,10700,17138,20225,20708,25783,26654,27507,29557,30632,
#Partially deleted in new
chr3	48161175	48161417	chr3:48161175-48161417	7	+	48161175	48161175	16724991	1	242,	0,
#Partially deleted in new
chr3	48164401	48174753	chr3:48164401-48174753	0	-	48164401	48164401	8553170	5	36,99,63,99,470,	0,1234,1429,3444,9882,
#Partially deleted in new
chr3	48177365	48187966	chr3:48177365-48187966	0	-	48177365	48187947	789624	8	77,135,120,99,37,43,77,189,	0,488,3355,5563,6434,7287,9337,10412,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	48180327	48180389	chr3:48180327-48180389	3	+	48180327	48180327	8553170	1	62,	0,
#Deleted in new
chr3	48181546	48181726	chr3:48181546-48181726	7	+	48181546	48181546	16724991	1	180,	0,
#Partially deleted in new
chr3	48182928	48188402	chr3:48182928-48188402	0	-	48182928	48187947	789624	6	102,37,43,77,438,33,	0,871,1724,3774,4849,5441,
#Deleted in new
chr3	48196563	48196616	chr3:48196563-48196616	3	+	48196563	48196563	5263520	1	53,	0,
#Deleted in new
chr3	48223346	48225491	chr3:48223346-48225491	3	+	48223502	48225424	789624	4	366,108,72,199,	0,1007,1256,1946,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	48241099	48270987	chr3:48241099-48270987	3	+	48241171	48268786	789624	4	115,53,127,3073,	0,6525,19713,26815,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	48241099	48287627	chr3:48241099-48287627	1	+	48241171	48286313	789624	4	115,53,127,1382,	0,6525,19713,45146,
#Partially deleted in new
chr3	48241100	48299253	chr3:48241100-48299253	1	+	48241171	48298974	789624	4	114,53,127,299,	0,6524,19712,57854,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	48241105	48286630	chr3:48241105-48286630	1	+	48241171	48286313	789624	5	109,53,127,243,385,	0,6519,19707,26812,45140,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	48241128	48287627	chr3:48241128-48287627	0	+	48241171	48268786	789624	5	86,53,127,3055,1382,	0,6496,19684,26786,45117,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	48241154	48270990	chr3:48241154-48270990	0	+	48241171	48256884	789624	6	60,53,312,33,127,3073,	0,6470,15556,16774,19658,26763,
#Deleted in new
chr3	48256349	48256938	chr3:48256349-48256938	7	-	48256349	48256349	16724991	1	589,	0,
#Partially deleted in new
chr3	48256586	48267981	chr3:48256586-48267981	0	+	48256586	48256586	8553170	4	436,33,127,67,	0,1342,4226,11328,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	48290721	48301685	chr3:48290721-48301685	1	-	48294665	48298516	789624	5	4082,161,103,97,333,	0,4353,6005,7705,10631,
#Partially deleted in new
chr3	48290792	48291375	chr3:48290792-48291375	7	-	48290792	48290792	16724991	1	583,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	48292782	48301367	chr3:48292782-48301367	1	-	48294636	48301312	789624	3	2021,161,72,	0,2292,8513,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	48293263	48301358	chr3:48293263-48301358	3	-	48294636	48301312	789624	6	1540,161,40,103,97,63,	0,1811,2855,3463,5163,8032,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	48293994	48301388	chr3:48293994-48301388	1	-	48294636	48298516	789624	6	809,161,40,103,97,110,	0,1080,2124,2732,4432,7284,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	48293996	48298524	chr3:48293996-48298524	1	-	48294636	48298516	789624	5	807,161,40,103,98,	0,1078,2122,2730,4430,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	48294082	48301305	chr3:48294082-48301305	1	-	48294636	48298516	789624	7	721,161,40,103,97,204,27,	0,992,2036,2644,4344,6348,7196,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	48294082	48301409	chr3:48294082-48301409	1	-	48294636	48295174	789624	3	721,161,57,	0,992,7270,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	48294158	48301338	chr3:48294158-48301338	1	-	48294636	48295174	789624	3	645,161,60,	0,916,7120,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	48294196	48301394	chr3:48294196-48301394	1	-	48294636	48298516	789624	4	607,103,97,42,	0,2530,4230,7156,
#Partially deleted in new
chr3	48294446	48301325	chr3:48294446-48301325	1	-	48294636	48298516	789624	7	357,161,40,103,97,108,47,	0,628,1672,2280,3980,6080,6832,
#Partially deleted in new
chr3	48294518	48301423	chr3:48294518-48301423	1	-	48294636	48298516	789624	6	285,161,40,103,97,71,	0,556,1600,2208,3908,6834,
#Partially deleted in new
chr3	48294521	48301387	chr3:48294521-48301387	1	-	48294636	48296784	789624	5	282,161,40,103,35,	0,553,1597,2205,6831,
#Partially deleted in new
chr3	48294523	48301387	chr3:48294523-48301387	0	-	48296180	48298516	789624	6	280,161,118,103,97,35,	0,551,1595,2203,3903,6829,
#Partially deleted in new
chr3	48294654	48301367	chr3:48294654-48301367	1	-	48294665	48298516	789624	5	149,161,103,97,89,	0,420,2072,3772,6624,
#Partially deleted in new
chr3	48294675	48301353	chr3:48294675-48301353	0	-	48294675	48298516	789624	6	128,161,40,103,97,84,	0,399,1443,2051,3751,6594,
#Partially deleted in new
chr3	48295134	48301362	chr3:48295134-48301362	0	-	48295134	48298516	789624	6	101,40,103,97,204,93,	0,984,1592,3292,5296,6135,
#Partially deleted in new
chr3	48295144	48301387	chr3:48295144-48301387	0	-	48296180	48298516	789624	6	91,118,103,97,108,35,	0,974,1582,3282,5382,6208,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	48295204	48301388	chr3:48295204-48301388	0	-	48295204	48295204	8553170	4	1032,103,97,36,	0,1522,3222,6148,
#Partially deleted in new
chr3	48296755	48301319	chr3:48296755-48301319	0	-	48296755	48300290	789624	4	74,97,447,50,	0,1671,3521,4514,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	48297476	48301396	chr3:48297476-48301396	0	-	48297476	48297476	8553170	2	1047,44,	0,3876,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	48298106	48301368	chr3:48298106-48301368	0	-	48298106	48298106	8553170	2	417,73,	0,3189,
#Partially deleted in new
chr3	48298255	48301411	chr3:48298255-48301411	0	-	48298255	48298255	8553170	2	268,133,	0,3023,
#Partially deleted in new
chr3	48306841	48328341	chr3:48306841-48328341	3	-	48306991	48328341	789624	5	162,43,122,50,67,	0,3062,12655,14183,21433,
#Deleted in new
chr3	48316359	48316459	chr3:48316359-48316459	3	-	48316359	48316359	5263520	1	100,	0,
#Partially deleted in new
chr3	48372218	48394725	chr3:48372218-48394725	3	+	48372767	48394659	789624	11	102,174,38,158,119,210,159,211,179,131,166,	0,465,1089,1329,3135,6098,7181,8483,9481,9736,22341,
#Partially deleted in new
chr3	48372274	48394687	chr3:48372274-48394687	1	+	48372767	48394659	789624	10	46,201,38,158,119,159,211,179,131,128,	0,382,1033,1273,3079,7125,8427,9425,9680,22285,
#Partially deleted in new
chr3	48372274	48394687	chr3:48372274-48394687	1	+	48378382	48394659	789624	8	46,119,144,159,211,179,131,128,	0,3079,6108,7125,8427,9425,9680,22285,
#Partially deleted in new
chr3	48372274	48394687	chr3:48372274-48394687	1	+	48372287	48394659	789624	10	46,38,158,119,210,159,211,179,131,128,	0,1033,1273,3079,6042,7125,8427,9425,9680,22285,
#Partially deleted in new
chr3	48372274	48394687	chr3:48372274-48394687	0	+	48372274	48372274	8553170	9	46,201,398,119,210,159,211,386,128,	0,382,1033,3079,6042,7125,8427,9425,22285,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	48379736	48401259	chr3:48379736-48401259	0	+	48379736	48379736	8553170	9	78,211,386,55,461,284,64,185,464,	0,965,1963,14823,15470,17362,19778,19965,21059,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	48379833	48380132	chr3:48379833-48380132	3	+	48379833	48379833	8553170	1	299,	0,
#Partially deleted in new
chr3	48403853	48430051	chr3:48403853-48430051	3	-	48404485	48424611	0	38	737,75,76,65,148,161,173,85,104,169,147,67,179,218,101,149,177,243,172,177,137,106,152,173,94,123,123,681,109,109,157,133,101,129,183,1113,53,44,	0,1870,2969,3173,5475,5717,6051,6442,6601,7014,8009,8384,8588,8888,9215,9816,10041,10945,11322,11729,12177,12492,14057,14337,14595,15063,15390,15723,16811,16994,17374,17820,18251,18477,18911,19651,21427,26154,
#Partially deleted in new
chr3	48403855	48429463	chr3:48403855-48429463	1	-	48404485	48424611	0	38	735,75,76,65,148,161,173,85,104,169,147,67,179,218,101,149,177,243,172,177,137,106,152,173,94,123,123,681,109,109,157,133,101,129,183,1113,53,211,	0,1868,2967,3171,5473,5715,6049,6440,6599,7012,8007,8382,8586,8886,9213,9814,10039,10943,11320,11727,12175,12490,14055,14335,14593,15061,15388,15721,16809,16992,17372,17818,18249,18475,18909,19649,21425,25397,
#Partially deleted in new
chr3	48403855	48414006	chr3:48403855-48414006	0	-	48403855	48403855	8553170	16	735,75,76,65,148,161,173,85,104,169,147,67,179,218,750,112,	0,1868,2967,3171,5473,5715,6049,6440,6599,7012,8007,8382,8586,8886,9213,10039,
#Partially deleted in new
chr3	48404485	48424611	chr3:48404485-48424611	1	-	48404485	48424611	0	37	105,75,76,65,148,161,173,85,104,169,147,67,179,218,101,149,177,243,172,177,137,106,152,173,94,123,123,98,34,109,109,157,133,101,129,183,1107,	0,1238,2337,2541,4843,5085,5419,5810,5969,6382,7377,7752,7956,8256,8583,9184,9409,10313,10690,11097,11545,11860,13425,13705,13963,14431,14758,15091,15738,16179,16362,16742,17188,17619,17845,18279,19019,
#Deleted in new
chr3	48404508	48406065	chr3:48404508-48406065	0	-	48404508	48404508	8553170	2	82,342,	0,1215,
#Partially deleted in new
chr3	48406722	48409404	chr3:48406722-48409404	0	-	48406722	48406722	8553170	3	176,65,76,	0,304,2606,
#Partially deleted in new
chr3	48407021	48409719	chr3:48407021-48409719	0	-	48407021	48407021	8553170	3	70,148,149,	0,2307,2549,
#Deleted in new
chr3	48409398	48410365	chr3:48409398-48410365	0	-	48409398	48409398	8553170	3	333,173,70,	0,506,897,
#Deleted in new
chr3	48410014	48411967	chr3:48410014-48411967	0	-	48410014	48410014	8553170	4	63,85,582,105,	0,281,440,1848,
#Deleted in new
chr3	48411005	48412940	chr3:48411005-48412940	0	-	48411005	48411005	8553170	4	31,442,179,199,	0,857,1436,1736,
#Deleted in new
chr3	48413219	48414980	chr3:48413219-48414980	0	-	48413219	48413219	8553170	2	852,182,	0,1579,
#Partially deleted in new
chr3	48413758	48424611	chr3:48413758-48424611	0	-	48419302	48424611	0	21	60,177,243,172,177,137,106,152,173,94,123,123,98,109,109,157,133,101,129,183,1107,	0,136,1040,1417,1824,2272,2587,4152,4432,4690,5158,5485,5818,6906,7089,7469,7915,8346,8572,9006,9746,
#Deleted in new
chr3	48413907	48415666	chr3:48413907-48415666	0	-	48413907	48413907	8553170	4	164,243,136,84,	0,891,1304,1675,
#Deleted in new
chr3	48413986	48415535	chr3:48413986-48415535	0	-	48413986	48413986	8553170	3	85,243,360,	0,812,1189,
#Deleted in new
chr3	48414990	48416833	chr3:48414990-48416833	0	-	48414990	48414990	8553170	5	51,172,177,137,488,	0,185,592,1040,1355,
#Deleted in new
chr3	48418188	48419744	chr3:48418188-48419744	0	-	48418188	48418188	8553170	4	175,94,123,168,	0,260,1055,1388,
#Deleted in new
chr3	48418286	48419612	chr3:48418286-48419612	0	-	48418286	48418286	8553170	4	77,94,123,369,	0,162,630,957,
#Deleted in new
chr3	48420078	48429481	chr3:48420078-48429481	0	-	48420078	48420078	8553170	4	179,109,109,229,	0,586,769,9174,
#Deleted in new
chr3	48422412	48423574	chr3:48422412-48423574	0	-	48422412	48422412	8553170	3	31,183,70,	0,352,1092,
#Partially deleted in new
chr3	48432163	48440081	chr3:48432163-48440081	1	-	48432407	48433856	789624	4	1003,165,199,94,	0,1543,2653,7824,
#Partially deleted in new
chr3	48432169	48440065	chr3:48432169-48440065	3	-	48432407	48435128	789624	4	997,165,320,78,	0,1537,2647,7818,
#Partially deleted in new
chr3	48432169	48440119	chr3:48432169-48440119	1	-	48432407	48433856	789624	4	997,165,199,24,	0,1537,2647,7926,
#Partially deleted in new
chr3	48432194	48440100	chr3:48432194-48440100	1	-	48432407	48433856	789624	4	972,270,199,113,	0,1512,2622,7793,
#Partially deleted in new
chr3	48433706	48438218	chr3:48433706-48438218	0	-	48433706	48435128	789624	3	165,320,348,	0,1110,4164,
#Partially deleted in new
chr3	48434941	48440456	chr3:48434941-48440456	0	-	48434941	48435128	789624	2	195,361,	0,5154,
#Partially deleted in new
chr3	48440256	48444208	chr3:48440256-48444208	3	+	48440296	48443882	789624	4	56,56,88,361,	0,146,284,3591,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	48440256	48441034	chr3:48440256-48441034	0	+	48440256	48440256	8553170	2	56,632,	0,146,
#Partially deleted in new
chr3	48440283	48444203	chr3:48440283-48444203	0	+	48440283	48440283	8553170	3	175,88,356,	0,257,3564,
#Partially deleted in new
chr3	48440351	48446632	chr3:48440351-48446632	3	-	48440351	48440351	8553170	2	511,374,	0,5907,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	48440778	48446656	chr3:48440778-48446656	1	-	48440778	48440778	8553170	3	84,142,323,	0,4245,5555,
#Partially deleted in new
chr3	48446709	48465655	chr3:48446709-48465655	1	+	48451728	48465554	0	14	90,134,83,171,119,158,96,130,690,137,92,81,253,169,	0,3327,3783,5019,7590,10549,12649,13077,13400,17035,17331,17872,18121,18777,
#Partially deleted in new
chr3	48446709	48460162	chr3:48446709-48460162	0	+	48450068	48459362	789624	7	90,134,171,119,96,130,53,	0,3327,5019,7590,12649,13077,13400,
#Partially deleted in new
chr3	48446709	48459397	chr3:48446709-48459397	0	+	48450068	48459397	789624	6	90,134,171,119,158,39,	0,3327,5019,7590,10549,12649,
#Partially deleted in new
chr3	48446732	48467645	chr3:48446732-48467645	3	+	48446845	48465554	0	13	360,134,171,119,158,96,130,690,137,92,81,253,2159,	0,3304,4996,7567,10526,12626,13054,13377,17012,17308,17849,18098,18754,
#Partially deleted in new
chr3	48446732	48465655	chr3:48446732-48465655	1	+	48446845	48465554	0	12	360,134,171,119,158,96,130,690,137,92,253,169,	0,3304,4996,7567,10526,12626,13054,13377,17012,17308,18098,18754,
#Partially deleted in new
chr3	48446736	48465655	chr3:48446736-48465655	0	+	48450068	48450531	789624	14	63,134,83,171,119,158,96,130,690,137,92,81,253,169,	0,3300,3756,4992,7563,10522,12622,13050,13373,17008,17304,17845,18094,18750,
#Partially deleted in new
chr3	48446845	48467645	chr3:48446845-48467645	0	+	48446845	48460738	789624	16	247,134,171,119,158,96,130,310,91,85,137,92,81,253,823,1016,	0,3191,4883,7454,10413,12513,12941,13264,13863,14515,16899,17195,17736,17985,18641,19784,
#Partially deleted in new
chr3	48447092	48465716	chr3:48447092-48465716	1	+	48450068	48465554	0	13	430,134,171,119,158,96,130,690,137,92,81,253,230,	0,2944,4636,7207,10166,12266,12694,13017,16652,16948,17489,17738,18394,
#Partially deleted in new
chr3	48454309	48467645	chr3:48454309-48467645	0	+	48454309	48465554	789624	11	109,158,96,130,690,137,92,81,253,823,1016,	0,2949,5049,5477,5800,9435,9731,10272,10521,11177,12320,
#Partially deleted in new
chr3	48454357	48459684	chr3:48454357-48459684	0	+	48454357	48454357	8553170	3	61,158,326,	0,2901,5001,
#Deleted in new
chr3	48465810	48467645	chr3:48465810-48467645	1	+	48467072	48467600	789624	4	128,59,12,906,	0,440,819,929,
#Deleted in new
chr3	48465854	48467645	chr3:48465854-48467645	3	+	48466655	48467600	789624	2	455,1016,	0,775,
#Deleted in new
chr3	48465945	48467643	chr3:48465945-48467643	1	+	48466685	48467600	789624	2	224,976,	0,722,
#Deleted in new
chr3	48466251	48467643	chr3:48466251-48467643	1	+	48467072	48467600	789624	2	58,866,	0,526,
#Deleted in new
chr3	48466256	48467644	chr3:48466256-48467644	1	+	48467072	48467600	789624	2	53,905,	0,483,
#Deleted in new
chr3	48466261	48467645	chr3:48466261-48467645	1	+	48467072	48467600	789624	2	48,581,	0,803,
#Partially deleted in new
chr3	48467797	48504431	chr3:48467797-48504431	1	-	48469106	48504094	789624	6	1389,213,116,81,157,413,	0,1563,1930,11379,33339,36221,
#Partially deleted in new
chr3	48467797	48504050	chr3:48467797-48504050	1	-	48469106	48501276	789624	7	1389,213,116,81,157,99,330,	0,1563,1930,11379,33339,35297,35923,
#Partially deleted in new
chr3	48467869	48504826	chr3:48467869-48504826	3	-	48469106	48501276	789624	6	1317,213,116,81,157,197,	0,1491,1858,11307,33267,36760,
#Partially deleted in new
chr3	48467875	48473208	chr3:48467875-48473208	1	-	48469106	48473014	789624	4	1311,213,116,199,	0,1485,1852,5134,
#Partially deleted in new
chr3	48467875	48473532	chr3:48467875-48473532	0	-	48467875	48467875	8553170	4	1311,213,116,99,	0,1485,1852,5558,
#Deleted in new
chr3	48467875	48469845	chr3:48467875-48469845	0	-	48467875	48467875	8553170	3	342,213,118,	0,1485,1852,
#Partially deleted in new
chr3	48467875	48473103	chr3:48467875-48473103	0	-	48467875	48467875	8553170	3	1698,116,94,	0,1852,5134,
#Partially deleted in new
chr3	48467876	48504050	chr3:48467876-48504050	0	-	48503908	48504050	789624	7	1310,213,116,81,157,99,330,	0,1484,1851,11300,33260,35218,35844,
#Partially deleted in new
chr3	48467876	48504795	chr3:48467876-48504795	1	-	48469106	48501276	789624	6	1310,213,116,81,157,373,	0,1484,1851,11300,33260,36546,
#Deleted in new
chr3	48467876	48469923	chr3:48467876-48469923	1	-	48468737	48469466	789624	6	1106,97,66,90,122,196,	0,1146,1244,1484,1575,1851,
#Partially deleted in new
chr3	48467910	48504129	chr3:48467910-48504129	1	-	48469106	48504094	789624	6	1276,213,116,81,136,111,	0,1450,1817,11266,33247,36108,
#Partially deleted in new
chr3	48468664	48473127	chr3:48468664-48473127	0	-	48468664	48468664	8553170	2	1179,118,	0,4345,
#Partially deleted in new
chr3	48468767	48473079	chr3:48468767-48473079	0	-	48468767	48468767	8553170	3	419,483,70,	0,593,4242,
#Partially deleted in new
chr3	48469359	48479559	chr3:48469359-48479559	0	-	48469359	48469359	8553170	3	214,116,383,	0,368,9817,
#Partially deleted in new
chr3	48469462	48504165	chr3:48469462-48504165	0	-	48477033	48504094	789624	6	111,116,272,81,157,147,	0,265,7357,9714,31674,34556,
#Partially deleted in new
chr3	48469727	48504140	chr3:48469727-48504140	0	-	48469727	48501276	789624	5	116,81,157,99,122,	0,9449,31409,33367,34291,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	48469793	48504154	chr3:48469793-48504154	0	-	48502342	48504094	789624	5	50,81,157,132,136,	0,9383,31343,32527,34225,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	48501178	48504140	chr3:48501178-48504140	0	-	48503134	48504094	789624	4	115,223,99,122,	0,1142,1916,2840,
#Partially deleted in new
chr3	48501181	48504776	chr3:48501181-48504776	0	-	48501181	48501181	8553170	3	112,99,354,	0,1913,3241,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	48502360	48504802	chr3:48502360-48504802	0	-	48502360	48502360	8553170	3	92,99,380,	0,734,2062,
#Partially deleted in new
chr3	48517683	48556890	chr3:48517683-48556890	3	-	48519746	48556777	789624	14	2123,65,63,130,105,147,208,122,57,75,67,97,117,210,	0,4302,5853,6017,7881,17828,18572,20814,21570,22013,25896,32180,32434,38997,
#Partially deleted in new
chr3	48519673	48556890	chr3:48519673-48556890	1	-	48519746	48556777	789624	13	133,65,63,130,147,208,122,57,75,67,97,117,210,	0,2312,3863,4027,15838,16582,18824,19580,20023,23906,30190,30444,37007,
#Partially deleted in new
chr3	48519673	48556890	chr3:48519673-48556890	1	-	48519746	48556777	789624	14	133,65,63,130,105,126,208,122,57,75,67,97,117,210,	0,2312,3863,4027,5891,15859,16582,18824,19580,20023,23906,30190,30444,37007,
#Partially deleted in new
chr3	48519673	48556890	chr3:48519673-48556890	0	-	48556213	48556777	789624	15	133,65,63,130,105,147,208,122,57,75,67,97,117,148,210,	0,2312,3863,4027,5891,15838,16582,18824,19580,20023,23906,30190,30444,36412,37007,
#Partially deleted in new
chr3	48519673	48556890	chr3:48519673-48556890	0	-	48550225	48556777	789624	15	133,65,63,130,105,147,208,122,57,75,67,97,117,137,210,	0,2312,3863,4027,5891,15838,16582,18824,19580,20023,23906,30190,30444,36412,37007,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	48519673	48556923	chr3:48519673-48556923	0	-	48519673	48519673	8553170	15	133,65,63,130,105,147,208,122,57,75,67,128,97,117,243,	0,2312,3863,4027,5891,15838,16582,18824,19580,20023,23906,28858,30190,30444,37007,
#Deleted in new
chr3	48523759	48526072	chr3:48523759-48526072	0	-	48523759	48523759	8553170	2	71,508,	0,1805,
#Partially deleted in new
chr3	48535511	48561172	chr3:48535511-48561172	0	-	48535511	48561115	789624	9	147,208,122,57,75,67,97,117,121,	0,744,2986,3742,4185,8068,14352,14606,25540,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	48536444	48549895	chr3:48536444-48549895	0	-	48536444	48536444	8553170	8	19,76,122,57,75,67,128,32,	0,300,2053,2809,3252,7135,12087,13419,
#Partially deleted in new
chr3	48538500	48557017	chr3:48538500-48557017	0	-	48538500	48550229	789624	7	119,57,75,67,97,117,35,	0,753,1196,5079,11363,11617,18482,
#Partially deleted in new
chr3	48539410	48550145	chr3:48539410-48550145	0	-	48539410	48539410	8553170	4	361,67,97,28,	0,4169,10453,10707,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	48539696	48561972	chr3:48539696-48561972	0	-	48539696	48539696	8553170	7	75,67,128,97,117,82,213,	0,3883,8835,10167,10421,21890,22063,
#Partially deleted in new
chr3	48543579	48559854	chr3:48543579-48559854	0	-	48543579	48559605	789624	4	67,97,117,355,	0,6284,6538,15920,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	48547878	48550235	chr3:48547878-48550235	0	-	48547878	48547878	8553170	4	506,128,97,118,	0,653,1985,2239,
#Partially deleted in new
chr3	48549863	48562015	chr3:48549863-48562015	0	-	48549863	48549863	8553170	3	97,117,429,	0,254,11723,
#Deleted in new
chr3	48549960	48550021	chr3:48549960-48550021	3	-	48549960	48549960	5263520	1	61,	0,
#Deleted in new
chr3	48561726	48563773	chr3:48561726-48563773	3	-	48562785	48563124	0	2	1410,71,	0,1976,
#Partially deleted in new
chr3	48564072	48595267	chr3:48564072-48595267	3	-	48564405	48595159	789624	118	350,198,93,87,33,49,54,78,117,63,63,54,54,81,36,72,72,57,36,36,45,60,36,72,108,60,36,45,45,42,36,69,81,36,63,33,45,36,36,45,63,45,69,63,36,201,123,36,48,36,36,96,36,36,45,63,36,81,36,36,81,30,27,45,72,45,36,81,36,60,54,33,36,36,45,36,45,36,60,63,54,27,78,72,36,36,81,63,45,27,36,173,147,127,137,147,135,147,123,147,126,144,120,144,126,144,129,150,117,147,117,130,164,162,94,160,181,193,	0,710,1036,1337,1563,2194,2437,2587,2834,3055,3501,3637,3765,4017,4426,4711,5302,5519,5652,5807,6061,6202,6392,6566,6788,7028,7170,7928,8054,8307,8430,8598,8789,8948,9101,9243,9440,9617,9782,10189,10415,10604,10724,10991,11134,11266,11553,11794,12176,12327,12449,12603,12811,12919,14248,14380,14846,15124,15296,15407,15515,15712,15958,16227,16508,16809,17049,17187,17375,17500,17633,17838,18250,18405,18536,18940,19054,19320,19483,19645,19827,19962,20225,20412,20661,20837,20963,21484,21617,21757,21867,22001,22259,22490,22899,23117,23347,23720,24209,24569,24797,25254,25526,26140,26386,26600,27391,27600,27825,28029,28278,28497,28702,29029,29283,29464,30295,31002,
#Deleted in new
chr3	48564072	48565019	chr3:48564072-48565019	0	-	48564072	48564072	8553170	2	350,237,	0,710,
#Deleted in new
chr3	48564072	48564992	chr3:48564072-48564992	0	-	48564072	48564072	8553170	2	441,210,	0,710,
#Partially deleted in new
chr3	48564072	48584520	chr3:48564072-48584520	0	-	48564072	48564072	8553170	83	350,198,93,87,33,49,54,78,117,63,63,54,54,81,36,72,72,57,36,36,45,60,36,72,108,60,803,45,42,36,69,81,36,63,33,45,36,36,45,63,45,69,63,36,201,123,36,48,36,36,96,36,36,45,63,36,81,36,36,81,30,27,45,72,45,36,81,36,60,54,33,36,36,45,36,45,36,60,63,54,27,78,36,	0,710,1036,1337,1563,2194,2437,2587,2834,3055,3501,3637,3765,4017,4426,4711,5302,5519,5652,5807,6061,6202,6392,6566,6788,7028,7170,8054,8307,8430,8598,8789,8948,9101,9243,9440,9617,9782,10189,10415,10604,10724,10991,11134,11266,11553,11794,12176,12327,12449,12603,12811,12919,14248,14380,14846,15124,15296,15407,15515,15712,15958,16227,16508,16809,17049,17187,17375,17500,17633,17838,18250,18405,18536,18940,19054,19320,19483,19645,19827,19962,20225,20412,
#Deleted in new
chr3	48564073	48565339	chr3:48564073-48565339	0	-	48564073	48564073	8553170	3	349,198,231,	0,709,1035,
#Deleted in new
chr3	48566539	48567363	chr3:48566539-48567363	0	-	48566539	48566539	8553170	2	24,704,	0,120,
#Deleted in new
chr3	48567697	48570441	chr3:48567697-48570441	0	-	48567697	48567697	8553170	10	66,54,81,36,72,72,57,36,36,308,	0,140,392,801,1086,1677,1894,2027,2182,2436,
#Deleted in new
chr3	48568163	48570882	chr3:48568163-48570882	0	-	48568163	48568163	8553170	11	69,36,72,72,57,36,36,201,36,72,22,	0,335,620,1211,1428,1561,1716,1970,2301,2475,2697,
#Deleted in new
chr3	48569757	48571626	chr3:48569757-48571626	0	-	48569757	48571548	789624	10	3,36,45,60,36,72,108,60,36,141,	0,122,376,517,707,881,1103,1343,1485,1728,
#Deleted in new
chr3	48570893	48571330	chr3:48570893-48571330	0	-	48570893	48570893	8553170	2	75,230,	0,207,
#Deleted in new
chr3	48578901	48578977	chr3:48578901-48578977	3	-	48578901	48578901	5263520	1	76,	0,
#Deleted in new
chr3	48599001	48601425	chr3:48599001-48601425	0	-	48599001	48599001	8553170	6	191,76,89,86,439,74,	0,633,1061,1480,1678,2350,
#Partially deleted in new
chr3	48599002	48610037	chr3:48599002-48610037	3	-	48599127	48609620	0	13	190,76,89,86,161,144,116,80,199,130,87,141,486,	0,632,1060,1479,1677,1972,2349,4561,5230,5648,6767,10159,10549,
#Deleted in new
chr3	48599033	48600841	chr3:48599033-48600841	0	-	48599033	48599033	8553170	4	677,89,86,162,	0,1029,1448,1646,
#Partially deleted in new
chr3	48599053	48609626	chr3:48599053-48609626	0	-	48604356	48609620	789624	12	139,76,89,86,161,144,116,80,199,130,87,80,	0,581,1009,1428,1626,1921,2298,4510,5179,5597,6716,10493,
#Partially deleted in new
chr3	48600117	48603644	chr3:48600117-48603644	0	-	48600117	48600117	8553170	6	34,86,161,144,116,81,	0,364,562,857,1234,3446,
#Partially deleted in new
chr3	48601405	48604786	chr3:48601405-48604786	0	-	48601405	48601405	8553170	4	62,80,199,136,	0,2158,2827,3245,
#Partially deleted in new
chr3	48603562	48609636	chr3:48603562-48609636	0	-	48609219	48609620	789624	6	81,199,130,87,141,140,	0,670,1088,2207,5599,5934,
#Partially deleted in new
chr3	48603997	48609635	chr3:48603997-48609635	0	-	48603997	48603997	8553170	5	434,130,87,141,139,	0,653,1772,5164,5499,
#Partially deleted in new
chr3	48604262	48609631	chr3:48604262-48609631	0	-	48604262	48604262	8553170	3	518,141,80,	0,4899,5289,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	48609595	48610976	chr3:48609595-48610976	0	-	48609595	48609595	8553170	2	410,157,	0,1224,
#Deleted in new
chr3	48620758	48621855	chr3:48620758-48621855	3	-	48620841	48621756	789624	2	269,393,	0,704,
#Partially deleted in new
chr3	48625722	48635483	chr3:48625722-48635483	1	-	48625985	48635393	789624	21	278,137,55,177,93,108,93,70,107,96,78,114,148,83,153,165,152,111,140,159,113,	0,495,908,1153,2223,2711,2899,3919,4149,4339,4715,4884,5270,5501,5926,6157,6522,7251,7528,7754,9648,
#Partially deleted in new
chr3	48625724	48635454	chr3:48625724-48635454	0	-	48633084	48635393	789624	20	276,137,55,197,127,93,70,107,96,78,114,148,83,153,165,152,152,140,159,84,	0,493,906,1151,2690,2897,3917,4147,4337,4713,4882,5268,5499,5924,6155,6520,7249,7526,7752,9646,
#Partially deleted in new
chr3	48625724	48635493	chr3:48625724-48635493	1	-	48625985	48635393	789624	19	276,137,55,177,93,108,93,70,107,96,78,114,148,83,149,111,140,159,123,	0,493,906,1151,2221,2709,2897,3917,4147,4337,4713,4882,5268,5499,5924,7249,7526,7752,9646,
#Partially deleted in new
chr3	48625724	48633846	chr3:48625724-48633846	1	-	48625985	48633595	789624	20	276,137,55,180,93,108,93,70,107,96,78,114,148,83,153,165,152,111,140,370,	0,493,906,1151,2221,2709,2897,3917,4147,4337,4713,4882,5268,5499,5924,6155,6520,7249,7526,7752,
#Partially deleted in new
chr3	48625724	48635454	chr3:48625724-48635454	1	-	48625985	48635393	789624	20	276,137,55,197,127,93,70,107,96,78,114,148,83,153,165,152,111,140,159,84,	0,493,906,1151,2690,2897,3917,4147,4337,4713,4882,5268,5499,5924,6155,6520,7249,7526,7752,9646,
#Partially deleted in new
chr3	48625724	48635441	chr3:48625724-48635441	3	-	48625985	48635393	789624	21	276,137,55,180,93,108,93,70,107,96,78,114,148,83,153,165,152,111,140,159,71,	0,493,906,1151,2221,2709,2897,3917,4147,4337,4713,4882,5268,5499,5924,6155,6520,7249,7526,7752,9646,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	48625724	48634327	chr3:48625724-48634327	0	-	48625724	48625724	8553170	12	276,137,55,1666,70,107,96,78,114,2092,140,851,	0,493,906,1151,3917,4147,4337,4713,4882,5268,7526,7752,
#Partially deleted in new
chr3	48625726	48633846	chr3:48625726-48633846	0	-	48625726	48625726	8553170	20	274,137,55,180,93,108,93,70,107,96,78,114,148,83,153,165,152,111,140,370,	0,491,904,1149,2219,2707,2895,3915,4145,4335,4711,4880,5266,5497,5922,6153,6518,7247,7524,7750,
#Partially deleted in new
chr3	48625745	48635441	chr3:48625745-48635441	1	-	48625985	48635393	789624	20	255,137,55,180,93,108,93,70,107,96,78,114,148,83,149,213,111,140,159,71,	0,472,885,1130,2200,2688,2876,3896,4126,4316,4692,4861,5247,5478,5903,6134,7228,7505,7731,9625,
#Partially deleted in new
chr3	48626893	48628492	chr3:48626893-48628492	0	-	48626893	48626893	8553170	2	159,547,	0,1052,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	48627528	48629755	chr3:48627528-48629755	0	-	48627528	48627528	8553170	4	510,108,93,114,	0,905,1093,2113,
#Deleted in new
chr3	48628168	48629749	chr3:48628168-48629749	0	-	48628168	48628168	8553170	3	373,93,108,	0,453,1473,
#Deleted in new
chr3	48628468	48631347	chr3:48628468-48631347	0	-	48628468	48628468	8553170	8	73,93,337,96,78,114,148,95,	0,153,1173,1593,1969,2138,2524,2784,
#Deleted in new
chr3	48629914	48632367	chr3:48629914-48632367	0	-	48629914	48632367	789624	9	64,96,78,114,148,83,39,165,123,	0,147,523,692,1078,1309,1848,1965,2330,
#Deleted in new
chr3	48630451	48632337	chr3:48630451-48632337	0	-	48630694	48632337	789624	7	64,114,134,83,153,165,93,	0,155,541,772,1197,1428,1793,
#Deleted in new
chr3	48630462	48632285	chr3:48630462-48632285	0	-	48630694	48632285	789624	7	53,114,148,54,149,165,41,	0,144,530,790,1186,1417,1782,
#Deleted in new
chr3	48630713	48631400	chr3:48630713-48631400	0	-	48630713	48630713	8553170	2	427,148,	0,539,
#Deleted in new
chr3	48630925	48631292	chr3:48630925-48631292	0	-	48630925	48630925	8553170	2	215,40,	0,327,
#Deleted in new
chr3	48631648	48633831	chr3:48631648-48633831	0	-	48631648	48631648	8553170	7	153,165,152,152,140,159,108,	0,231,596,1325,1602,1828,2075,
#Deleted in new
chr3	48631744	48633380	chr3:48631744-48633380	0	-	48632311	48633380	789624	5	57,165,93,111,130,	0,135,500,1229,1506,
#Deleted in new
chr3	48631937	48635441	chr3:48631937-48635441	0	-	48631937	48635393	789624	5	107,111,140,159,71,	0,1036,1313,1539,3433,
#Deleted in new
chr3	48632018	48635441	chr3:48632018-48635441	0	-	48632018	48635393	789624	5	74,111,140,159,71,	0,955,1232,1458,3352,
#Deleted in new
chr3	48633635	48633698	chr3:48633635-48633698	3	-	48633635	48633635	5263520	1	63,	0,
#Partially deleted in new
chr3	48636468	48662915	chr3:48636468-48662915	3	-	48638204	48662634	789624	35	1764,886,201,159,110,149,117,124,80,113,175,207,127,168,166,156,196,210,95,102,184,121,142,172,117,186,170,126,164,158,89,116,226,651,4029,	0,3205,4855,5382,5889,6267,6498,7085,7747,8247,8566,8974,9273,9621,10294,11372,11797,12250,12652,14011,14423,14890,15108,15408,15968,16533,17150,17409,17820,18575,18837,19267,19671,20229,22418,
#Partially deleted in new
chr3	48636598	48643930	chr3:48636598-48643930	0	-	48636598	48636598	8553170	8	1634,886,201,159,110,149,117,377,	0,3075,4725,5252,5759,6137,6368,6955,
#Partially deleted in new
chr3	48636598	48643930	chr3:48636598-48643930	0	-	48636598	48636598	8553170	4	1634,1851,617,1195,	0,3075,5252,6137,
#Deleted in new
chr3	48640483	48642137	chr3:48640483-48642137	0	-	48640483	48640483	8553170	3	76,201,287,	0,840,1367,
#Deleted in new
chr3	48644193	48644280	chr3:48644193-48644280	3	-	48644193	48644193	5263520	1	87,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	48663775	48669174	chr3:48663775-48669174	3	+	48663775	48663775	789624	3	38,82,76,	0,1865,5323,
#Deleted in new
chr3	48672454	48672733	chr3:48672454-48672733	3	+	48672454	48672454	8553170	1	279,	0,
#Partially deleted in new
chr3	48673843	48685927	chr3:48673843-48685927	1	-	48674543	48685807	789624	13	904,173,93,129,81,139,87,171,494,112,205,110,291,	0,4720,5033,5211,5533,5731,5957,6215,7443,8201,8504,9059,11793,
#Partially deleted in new
chr3	48673843	48685884	chr3:48673843-48685884	3	-	48674543	48685807	789624	13	904,173,93,129,81,139,87,171,494,91,205,110,248,	0,4720,5033,5211,5533,5731,5957,6215,7443,8201,8504,9059,11793,
#Partially deleted in new
chr3	48674365	48679121	chr3:48674365-48679121	0	-	48674634	48679121	789624	4	382,183,93,67,	0,4188,4511,4689,
#Partially deleted in new
chr3	48674634	48679714	chr3:48674634-48679714	0	-	48674634	48674634	8553170	5	113,173,307,81,140,	0,3929,4242,4742,4940,
#Deleted in new
chr3	48679075	48681584	chr3:48679075-48681584	0	-	48679075	48681584	789624	5	108,139,87,171,298,	0,499,725,983,2211,
#Deleted in new
chr3	48681192	48685835	chr3:48681192-48685835	0	-	48681192	48685807	789624	5	588,112,205,110,199,	0,852,1155,1710,4444,
#Deleted in new
chr3	48681529	48685927	chr3:48681529-48685927	0	-	48683035	48685807	789624	5	251,112,205,139,291,	0,515,818,1373,4107,
#Deleted in new
chr3	48681533	48686364	chr3:48681533-48686364	0	-	48681533	48682485	789624	5	247,112,205,144,189,	0,511,814,1335,4642,
#Deleted in new
chr3	48681533	48686361	chr3:48681533-48686361	0	-	48681533	48682949	789624	5	247,112,205,139,186,	0,511,814,1369,4642,
#Partially deleted in new
chr3	48688002	48717250	chr3:48688002-48717250	3	-	48688272	48695291	789624	6	771,176,176,226,332,94,	0,1535,3304,4951,7087,29154,
#Partially deleted in new
chr3	48689537	48695588	chr3:48689537-48695588	0	-	48689537	48689537	8553170	4	176,176,226,499,	0,1769,3416,5552,
#Partially deleted in new
chr3	48689609	48693335	chr3:48689609-48693335	0	-	48689609	48689609	8553170	3	104,176,382,	0,1697,3344,
#Partially deleted in new
chr3	48693058	48717214	chr3:48693058-48717214	0	-	48693058	48695291	789624	4	121,69,332,58,	0,211,2031,24098,
#Partially deleted in new
chr3	48693067	48717166	chr3:48693067-48717166	0	-	48693067	48695291	789624	3	112,332,109,	0,2022,23990,
#Partially deleted in new
chr3	48693080	48717214	chr3:48693080-48717214	0	-	48693080	48695291	789624	4	99,329,93,58,	0,2009,18286,24076,
#Partially deleted in new
chr3	48693120	48717215	chr3:48693120-48717215	0	-	48693120	48695291	789624	4	59,332,93,59,	0,1969,18246,24036,
#Partially deleted in new
chr3	48693122	48717188	chr3:48693122-48717188	0	-	48693122	48715349	789624	4	57,329,213,32,	0,1967,22192,24034,
#Partially deleted in new
chr3	48693447	48717216	chr3:48693447-48717216	1	-	48694148	48695291	789624	3	793,332,60,	0,1642,23709,
#Partially deleted in new
chr3	48693452	48717278	chr3:48693452-48717278	1	-	48694463	48695291	789624	4	788,67,332,122,	0,1006,1637,23704,
#Duplicated in new
chr3	48693455	48740353	chr3:48693455-48740353	0	-	48694898	48695291	789624	9	785,728,331,20,110,123,85,160,148,	0,1238,23701,24414,25192,36199,45426,46131,46750,
#Partially deleted in new
chr3	48693487	48717203	chr3:48693487-48717203	0	-	48694813	48695291	789624	4	753,131,329,47,	0,1206,1602,23669,
#Partially deleted in new
chr3	48693520	48717216	chr3:48693520-48717216	1	-	48694898	48715349	789624	3	1901,213,60,	0,21794,23636,
#Partially deleted in new
chr3	48693784	48717192	chr3:48693784-48717192	1	-	48694898	48695291	789624	2	1637,36,	0,23372,
#Partially deleted in new
chr3	48693983	48715417	chr3:48693983-48715417	1	-	48694148	48715349	789624	3	257,329,103,	0,1106,21331,
#Partially deleted in new
chr3	48694050	48717214	chr3:48694050-48717214	1	-	48694898	48715435	789624	3	1368,139,58,	0,21338,23106,
#Partially deleted in new
chr3	48694171	48715529	chr3:48694171-48715529	0	-	48694171	48715435	789624	3	69,329,141,	0,918,21217,
#Partially deleted in new
chr3	48694174	48717249	chr3:48694174-48717249	0	-	48694813	48715435	789624	5	66,123,329,139,93,	0,527,915,21214,22982,
#Partially deleted in new
chr3	48694344	48717206	chr3:48694344-48717206	1	-	48694898	48695291	789624	2	1074,50,	0,22812,
#Partially deleted in new
chr3	48694623	48717192	chr3:48694623-48717192	1	-	48694898	48715435	789624	3	798,139,36,	0,20765,22533,
#Partially deleted in new
chr3	48694770	48717188	chr3:48694770-48717188	0	-	48694770	48694770	8553170	4	54,332,213,32,	0,319,20544,22386,
#Deleted in new
chr3	48694871	48695582	chr3:48694871-48695582	1	-	48694898	48695291	789624	2	547,24,	0,687,
#Partially deleted in new
chr3	48695168	48717215	chr3:48695168-48717215	0	-	48695168	48715349	789624	4	250,213,46,59,	0,20146,21263,21988,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	48699361	48717193	chr3:48699361-48717193	0	-	48699361	48699361	8553170	2	427,37,	0,17795,
#Partially deleted in new
chr3	48744596	48752318	chr3:48744596-48752318	0	-	48751584	48752318	789624	3	171,134,143,	0,6988,7579,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	48746578	48847846	chr3:48746578-48847846	3	-	48751584	48847596	0	11	5140,142,66,75,102,154,107,84,53,36,512,	0,5597,9800,18425,18669,26376,36407,43965,47418,61070,100756,
#Partially deleted in new
chr3	48747514	48847804	chr3:48747514-48847804	1	-	48751584	48847596	0	12	426,134,142,66,75,102,154,107,84,53,36,470,	0,4070,4661,8864,17489,17733,25440,35471,43029,46482,60134,99820,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	48749647	48847828	chr3:48749647-48847828	1	-	48751584	48847596	0	10	2071,142,75,102,154,107,84,53,36,494,	0,2528,15356,15600,23307,33338,40896,44349,58001,97687,
#Partially deleted in new
chr3	48751257	48794013	chr3:48751257-48794013	0	-	48751282	48794013	789624	6	163,102,154,107,84,17,	0,13990,21697,31728,39286,42739,
#Partially deleted in new
chr3	48751338	48765350	chr3:48751338-48765350	0	-	48751664	48765350	789624	4	380,66,75,103,	0,5040,13665,13909,
#Partially deleted in new
chr3	48790598	48847833	chr3:48790598-48847833	0	-	48790598	48847596	789624	3	29,53,499,	0,3398,56736,
#Deleted in new
chr3	48847571	48848493	chr3:48847571-48848493	0	+	48847571	48847571	8553170	2	454,389,	0,533,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	48847936	48849454	chr3:48847936-48849454	0	+	48847936	48847936	8553170	2	472,468,	0,1050,
#Deleted in new
chr3	48847936	48849185	chr3:48847936-48849185	1	+	48847936	48847936	8553170	3	89,304,199,	0,168,1050,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	48847956	48851981	chr3:48847956-48851981	3	+	48847956	48847956	789624	2	452,2995,	0,1030,
#Partially deleted in new
chr3	48856930	48898904	chr3:48856930-48898904	1	-	48857709	48898794	789624	7	842,125,110,73,118,93,215,	0,1576,2161,2624,5611,35049,41759,
#Partially deleted in new
chr3	48856935	48898993	chr3:48856935-48898993	3	-	48857709	48898794	789624	9	837,125,110,73,118,91,128,93,304,	0,1571,2156,2619,5606,22422,27061,35044,41754,
#Partially deleted in new
chr3	48857240	48858668	chr3:48857240-48858668	0	-	48857240	48857240	8553170	2	532,162,	0,1266,
#Partially deleted in new
chr3	48857391	48898892	chr3:48857391-48898892	0	-	48892007	48898794	789624	10	381,125,110,73,118,91,128,93,61,203,	0,1115,1700,2163,5150,21966,26605,34588,38363,41298,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	48917781	48918823	chr3:48917781-48918823	0	-	48917781	48917781	8553170	1	1042,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	48917787	48919385	chr3:48917787-48919385	3	-	48918276	48919149	789624	1	1598,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	48918820	48986382	chr3:48918820-48986382	3	+	48927558	48983270	789624	16	178,64,352,68,64,151,122,110,118,51,22,152,144,69,84,3184,	0,3927,8641,42791,46098,48304,49713,51774,54878,55996,56137,60661,61532,62839,64075,64378,
#Partially deleted in new
chr3	48918820	48967151	chr3:48918820-48967151	0	+	48927558	48967151	789624	6	178,64,352,68,64,27,	0,3927,8641,42791,46098,48304,
#Partially deleted in new
chr3	48918820	48961679	chr3:48918820-48961679	0	+	48927558	48961679	789624	3	178,352,68,	0,8641,42791,
#Partially deleted in new
chr3	48918820	48967275	chr3:48918820-48967275	0	+	48918820	48918820	8553170	5	178,46,68,64,151,	0,26315,42791,46098,48304,
#Partially deleted in new
chr3	48918822	48970666	chr3:48918822-48970666	0	+	48918822	48918822	8553170	6	176,64,64,151,122,72,	0,3925,46096,48302,49711,51772,
#Partially deleted in new
chr3	48918828	48964982	chr3:48918828-48964982	0	+	48918828	48918828	8553170	5	170,64,200,68,64,	0,3919,26153,42783,46090,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	48918831	48925217	chr3:48918831-48925217	0	+	48918831	48918831	8553170	3	167,64,500,	0,3916,5886,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	48918835	48983620	chr3:48918835-48983620	1	+	48927558	48983270	789624	17	163,64,122,352,68,64,151,122,110,118,51,22,152,144,69,84,422,	0,3912,5882,8626,42776,46083,48289,49698,51759,54863,55981,56122,60646,61517,62824,64060,64363,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	48918835	48925082	chr3:48918835-48925082	0	+	48918835	48918835	8553170	2	163,365,	0,5882,
#Partially deleted in new
chr3	48918835	48979613	chr3:48918835-48979613	0	+	48918835	48918835	8553170	10	163,68,64,151,122,110,118,51,22,132,	0,42776,46083,48289,49698,51759,54863,55981,56122,60646,
#Partially deleted in new
chr3	48918841	48974868	chr3:48918841-48974868	0	+	48918841	48918841	8553170	6	157,68,64,110,118,52,	0,42770,46077,51753,54857,55975,
#Partially deleted in new
chr3	48918843	48967283	chr3:48918843-48967283	0	+	48918843	48918843	8553170	6	155,64,46,68,64,159,	0,3904,26292,42768,46075,48281,
#Partially deleted in new
chr3	48918843	48970644	chr3:48918843-48970644	0	+	48918843	48918843	8553170	7	155,64,68,64,151,122,50,	0,3904,42768,46075,48281,49690,51751,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	48918847	48964984	chr3:48918847-48964984	0	+	48918847	48918847	8553170	6	151,64,122,46,68,66,	0,3900,5870,26288,42764,46071,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	48918852	48961679	chr3:48918852-48961679	0	+	48927558	48961679	789624	5	146,64,254,352,68,	0,3895,5865,8609,42759,
#Partially deleted in new
chr3	48918855	48968581	chr3:48918855-48968581	0	+	48918855	48918855	8553170	4	143,64,151,48,	0,46063,48269,49678,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	48918856	48927813	chr3:48918856-48927813	0	+	48927558	48927813	789624	4	142,120,64,352,	0,3492,3891,8605,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	48918894	48968655	chr3:48918894-48968655	0	+	48918894	48918894	8553170	7	104,64,122,68,64,151,122,	0,3853,5823,42717,46024,48230,49639,
#Partially deleted in new
chr3	48922760	48927956	chr3:48922760-48927956	0	+	48922760	48922760	8553170	2	51,495,	0,4701,
#Partially deleted in new
chr3	48922764	48967275	chr3:48922764-48967275	0	+	48922764	48922764	8553170	6	47,352,46,68,64,151,	0,4697,22371,38847,42154,44360,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	48924715	48945181	chr3:48924715-48945181	0	+	48924715	48924715	8553170	3	124,352,46,	0,2746,20420,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	48926717	48983679	chr3:48926717-48983679	0	+	48927558	48961631	789624	15	1096,46,68,64,151,122,110,118,51,22,152,144,69,84,481,	0,18418,34894,38201,40407,41816,43877,46981,48099,48240,52764,53635,54942,56178,56481,
#Partially deleted in new
chr3	48943185	48967170	chr3:48943185-48967170	0	+	48943185	48943185	8553170	5	348,46,68,64,46,	0,1950,18426,21733,23939,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	48964917	48968632	chr3:48964917-48968632	0	+	48964917	48964917	8553170	4	65,151,117,99,	0,2207,3143,3616,
#Partially deleted in new
chr3	48967205	48974695	chr3:48967205-48974695	0	+	48967205	48967205	8553170	5	70,122,247,118,31,	0,1328,3389,6493,7459,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	48968333	48970713	chr3:48968333-48970713	0	+	48968333	48968333	8553170	2	322,119,	0,2261,
#Partially deleted in new
chr3	48973614	48975111	chr3:48973614-48975111	0	+	48973614	48973614	8553170	3	202,51,154,	0,1202,1343,
#Partially deleted in new
chr3	48979917	48983985	chr3:48979917-48983985	0	-	48979917	48979917	8553170	2	429,91,	0,3977,
#Partially deleted in new
chr3	48979931	48983866	chr3:48979931-48983866	3	-	48979931	48979931	8553170	2	415,140,	0,3795,
#Deleted in new
chr3	48982709	48983422	chr3:48982709-48983422	0	+	48982709	48982709	8553170	2	270,224,	0,489,
#Partially deleted in new
chr3	48985048	48989988	chr3:48985048-48989988	3	-	48985048	48985048	8553170	2	341,441,	0,4499,
#Deleted in new
chr3	48985484	48985963	chr3:48985484-48985963	3	-	48985484	48985484	8553170	1	479,	0,
#Partially deleted in new
chr3	48989885	49007154	chr3:48989885-49007154	3	+	48990256	49006907	789624	9	725,82,191,97,163,186,91,124,468,	0,947,11552,12614,14212,14975,15891,16178,16801,
#Partially deleted in new
chr3	48989888	49007115	chr3:48989888-49007115	1	+	48990256	49006907	789624	9	722,82,191,97,163,310,150,124,429,	0,944,11549,12611,14209,14972,15829,16175,16798,
#Partially deleted in new
chr3	48989907	49007115	chr3:48989907-49007115	0	+	48989907	48989907	8553170	8	703,82,191,97,163,1007,124,429,	0,925,11530,12592,14190,14953,16156,16779,
#Partially deleted in new
chr3	48989937	49007115	chr3:48989937-49007115	0	+	48989937	48989937	8553170	4	977,191,3688,429,	0,11500,12562,16749,
#Deleted in new
chr3	48990261	48992229	chr3:48990261-48992229	0	+	48990261	48990261	8553170	1	1968,	0,
#Partially deleted in new
chr3	48990337	48999784	chr3:48990337-48999784	0	+	48990337	48999553	789624	3	273,82,296,	0,495,9151,
#Partially deleted in new
chr3	48990402	49004263	chr3:48990402-49004263	0	+	48990402	49004263	789624	5	208,82,125,97,166,	0,430,11035,12097,13695,
#Partially deleted in new
chr3	48990604	49004195	chr3:48990604-49004195	0	+	48990604	48990604	8553170	4	310,191,97,98,	0,10833,11895,13493,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	48996127	49002594	chr3:48996127-49002594	0	+	48996127	48996127	8553170	3	289,191,95,	0,5310,6372,
#Deleted in new
chr3	48997220	48999442	chr3:48997220-48999442	7	-	48997220	48997220	16724991	4	312,84,171,196,	0,651,962,2026,
#Deleted in new
chr3	49001072	49002976	chr3:49001072-49002976	0	+	49001072	49001072	8553170	2	556,477,	0,1427,
#Deleted in new
chr3	49001473	49007115	chr3:49001473-49007115	0	+	49001473	49006907	789624	3	155,97,429,	0,1026,5213,
#Deleted in new
chr3	49001625	49004595	chr3:49001625-49004595	0	+	49001625	49004264	789624	3	3,97,498,	0,874,2472,
#Partially deleted in new
chr3	49007061	49015953	chr3:49007061-49015953	3	+	49007341	49015288	789624	6	470,2482,84,117,119,1129,	0,4573,7148,7321,7538,7763,
#Partially deleted in new
chr3	49007203	49015953	chr3:49007203-49015953	1	+	49007341	49015288	789624	6	328,2482,84,117,119,1129,	0,4431,7006,7179,7396,7621,
#Partially deleted in new
chr3	49007389	49013350	chr3:49007389-49013350	0	+	49007389	49007389	8553170	4	142,893,60,60,	0,4632,5652,5901,
#Partially deleted in new
chr3	49007392	49012251	chr3:49007392-49012251	0	+	49007431	49012251	789624	3	139,96,617,	0,4028,4242,
#Partially deleted in new
chr3	49007392	49015953	chr3:49007392-49015953	1	+	49007431	49015288	789624	6	139,2482,84,117,119,1129,	0,4242,6817,6990,7207,7432,
#Partially deleted in new
chr3	49007395	49015425	chr3:49007395-49015425	1	+	49007431	49015288	789624	6	136,826,84,117,119,601,	0,5895,6814,6987,7204,7429,
#Partially deleted in new
chr3	49007396	49015589	chr3:49007396-49015589	0	+	49007431	49011527	789624	6	135,2696,84,117,119,765,	0,4024,6813,6986,7203,7428,
#Partially deleted in new
chr3	49007402	49015365	chr3:49007402-49015365	0	+	49007402	49007402	8553170	5	129,2659,117,119,541,	0,4232,6980,7197,7422,
#Partially deleted in new
chr3	49007431	49011527	chr3:49007431-49011527	1	+	49007431	49011527	789624	2	100,107,	0,3989,
#Partially deleted in new
chr3	49007607	49015347	chr3:49007607-49015347	1	+	49011687	49015288	789624	6	52,2482,84,117,119,523,	0,4027,6602,6775,6992,7217,
#Partially deleted in new
chr3	49007610	49011909	chr3:49007610-49011909	0	+	49011612	49011909	789624	2	49,489,	0,3810,
#Partially deleted in new
chr3	49007624	49012434	chr3:49007624-49012434	0	+	49007624	49007624	8553170	3	35,107,413,	0,4010,4397,
#Partially deleted in new
chr3	49008060	49012062	chr3:49008060-49012062	0	+	49011687	49012062	789624	2	136,428,	0,3574,
#Partially deleted in new
chr3	49008065	49011792	chr3:49008065-49011792	0	+	49011687	49011792	789624	2	333,158,	0,3569,
#Deleted in new
chr3	49011633	49015945	chr3:49011633-49015945	1	+	49014030	49015288	789624	6	245,263,84,117,119,1121,	0,2220,2576,2749,2966,3191,
#Deleted in new
chr3	49013904	49014719	chr3:49013904-49014719	0	+	49013904	49013904	8553170	3	389,117,120,	0,478,695,
#Deleted in new
chr3	49014238	49014981	chr3:49014238-49014981	0	+	49014238	49014238	8553170	3	261,119,157,	0,361,586,
#Deleted in new
chr3	49015487	49018571	chr3:49015487-49018571	1	-	49015587	49018564	789624	12	220,69,114,183,83,62,74,129,80,257,296,172,	0,316,485,670,941,1124,1286,1740,1946,2125,2535,2912,
#Deleted in new
chr3	49015487	49016511	chr3:49015487-49016511	0	-	49015587	49016511	789624	5	220,54,114,183,83,	0,331,485,670,941,
#Deleted in new
chr3	49015487	49018564	chr3:49015487-49018564	1	-	49015642	49018564	789624	12	220,69,88,183,83,62,74,129,80,257,296,165,	0,316,485,670,941,1124,1286,1740,1946,2125,2535,2912,
#Deleted in new
chr3	49015487	49018566	chr3:49015487-49018566	0	-	49015487	49015487	8553170	10	220,69,368,83,62,74,129,80,257,544,	0,316,485,941,1124,1286,1740,1946,2125,2535,
#Deleted in new
chr3	49015487	49016283	chr3:49015487-49016283	0	-	49015487	49015487	8553170	2	220,465,	0,331,
#Deleted in new
chr3	49015490	49017356	chr3:49015490-49017356	0	-	49015490	49015490	8553170	6	217,537,83,62,74,129,	0,313,938,1121,1283,1737,
#Deleted in new
chr3	49015490	49018576	chr3:49015490-49018576	0	-	49015490	49015490	8553170	2	2023,964,	0,2122,
#Partially deleted in new
chr3	49015492	49021251	chr3:49015492-49021251	3	-	49015587	49017829	789624	12	215,69,114,183,83,62,74,129,80,257,296,406,	0,311,480,665,936,1119,1281,1735,1941,2120,2530,5353,
#Partially deleted in new
chr3	49015492	49021058	chr3:49015492-49021058	1	-	49015642	49017829	789624	12	215,268,183,83,62,74,129,80,257,296,154,213,	0,326,665,936,1119,1281,1735,1941,2120,2530,2907,5353,
#Deleted in new
chr3	49015523	49016850	chr3:49015523-49016850	0	-	49015523	49015523	8553170	4	184,537,83,239,	0,280,905,1088,
#Deleted in new
chr3	49015524	49018021	chr3:49015524-49018021	0	-	49015524	49015524	8553170	6	816,83,74,129,80,409,	0,904,1249,1703,1909,2088,
#Deleted in new
chr3	49015576	49018571	chr3:49015576-49018571	0	-	49015576	49015576	8553170	11	131,69,114,183,83,62,74,286,257,296,172,	0,227,396,581,852,1035,1197,1651,2036,2446,2823,
#Deleted in new
chr3	49016788	49018564	chr3:49016788-49018564	0	-	49016788	49018564	789624	6	59,129,80,257,191,165,	0,439,645,824,1234,1611,
#Partially deleted in new
chr3	49017612	49022293	chr3:49017612-49022293	0	-	49017612	49017829	789624	3	257,296,286,	0,410,4395,
#Partially deleted in new
chr3	49018195	49022291	chr3:49018195-49022291	0	-	49018195	49018195	8553170	3	123,154,284,	0,204,3812,
#Deleted in new
chr3	49020147	49020234	chr3:49020147-49020234	3	-	49020147	49020147	5263520	1	87,	0,
#Deleted in new
chr3	49020458	49023287	chr3:49020458-49023287	1	+	49022439	49023172	789624	5	112,193,67,101,232,	0,1887,2243,2417,2597,
#Deleted in new
chr3	49020617	49020709	chr3:49020617-49020709	3	-	49020617	49020617	5263520	1	92,	0,
#Deleted in new
chr3	49021010	49023495	chr3:49021010-49023495	3	+	49022144	49023172	789624	5	1211,193,67,101,440,	0,1335,1691,1865,2045,
#Deleted in new
chr3	49021184	49023287	chr3:49021184-49023287	1	+	49022439	49023172	789624	5	215,193,67,101,232,	0,1161,1517,1691,1871,
#Deleted in new
chr3	49021604	49023288	chr3:49021604-49023288	1	+	49022439	49023172	789624	5	180,193,67,101,233,	0,741,1097,1271,1451,
#Deleted in new
chr3	49022112	49023287	chr3:49022112-49023287	0	+	49022112	49022112	8553170	4	426,67,101,232,	0,589,763,943,
#Deleted in new
chr3	49022120	49023176	chr3:49022120-49023176	0	+	49022120	49022120	8553170	3	101,193,475,	0,225,581,
#Partially deleted in new
chr3	49024324	49029390	chr3:49024324-49029390	3	-	49024382	49029350	0	14	80,84,144,145,144,96,91,200,88,207,75,102,49,138,	0,170,334,571,801,1999,2194,2362,2635,3385,3923,4106,4433,4928,
#Partially deleted in new
chr3	49024324	49028473	chr3:49024324-49028473	0	-	49024382	49028473	789624	13	80,84,144,145,144,72,96,91,200,88,207,75,43,	0,170,334,571,801,1670,1999,2194,2362,2635,3385,3923,4106,
#Deleted in new
chr3	49024324	49025193	chr3:49024324-49025193	0	-	49024324	49024324	8553170	3	478,145,68,	0,571,801,
#Deleted in new
chr3	49024324	49024976	chr3:49024324-49024976	0	-	49024324	49024324	8553170	3	80,308,81,	0,170,571,
#Deleted in new
chr3	49024328	49024838	chr3:49024328-49024838	0	-	49024328	49024328	8553170	2	76,344,	0,166,
#Deleted in new
chr3	49024342	49025243	chr3:49024342-49025243	0	-	49024342	49024342	8553170	4	236,144,145,118,	0,316,553,783,
#Deleted in new
chr3	49024490	49025415	chr3:49024490-49025415	0	-	49024490	49024490	8553170	2	550,290,	0,635,
#Partially deleted in new
chr3	49026323	49028142	chr3:49026323-49028142	0	-	49026323	49026323	8553170	5	96,91,200,88,433,	0,195,363,636,1386,
#Partially deleted in new
chr3	49026516	49029378	chr3:49026516-49029378	0	-	49026516	49029350	789624	7	93,200,88,207,102,49,126,	0,170,443,1193,1914,2241,2736,
#Partially deleted in new
chr3	49026544	49028127	chr3:49026544-49028127	0	-	49026544	49026544	8553170	3	65,361,418,	0,142,1165,
#Deleted in new
chr3	49027710	49029398	chr3:49027710-49029398	0	-	49027710	49027710	8553170	4	206,124,376,146,	0,488,720,1542,
#Deleted in new
chr3	49027869	49029408	chr3:49027869-49029408	0	-	49027869	49027869	8553170	4	453,102,49,156,	0,561,888,1383,
#Deleted in new
chr3	49029315	49029706	chr3:49029315-49029706	3	+	49029315	49029315	8553170	1	391,	0,
#Partially deleted in new
chr3	49029706	49094363	chr3:49029706-49094363	3	-	49030451	49077017	789624	10	938,91,152,109,115,155,178,1029,330,452,	0,2476,2915,3413,14683,16718,17362,27155,47002,64205,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	49029930	49033830	chr3:49029930-49033830	0	-	49029930	49029930	8553170	2	714,1648,	0,2252,
#Partially deleted in new
chr3	49029931	49094062	chr3:49029931-49094062	1	-	49030451	49077017	789624	11	713,91,152,109,115,155,178,1029,330,60,151,	0,2251,2690,3188,14458,16493,17137,26930,46777,62465,63980,
#Partially deleted in new
chr3	49030211	49093611	chr3:49030211-49093611	1	-	49030451	49077017	789624	11	433,91,152,109,115,155,178,1029,330,60,357,	0,1971,2410,2908,14178,16213,16857,26650,46497,62185,63043,
#Partially deleted in new
chr3	49030374	49044442	chr3:49030374-49044442	0	-	49030374	49030374	8553170	4	270,91,607,53,	0,1808,2247,14015,
#Deleted in new
chr3	49032182	49033201	chr3:49032182-49033201	0	-	49032182	49032182	8553170	3	91,152,303,	0,439,716,
#Deleted in new
chr3	49032618	49033168	chr3:49032618-49033168	0	-	49032618	49032618	8553170	2	155,49,	0,501,
#Partially deleted in new
chr3	49033046	49046458	chr3:49033046-49046458	0	-	49033046	49033046	8553170	3	182,115,34,	0,11343,13378,
#Partially deleted in new
chr3	49033082	49057875	chr3:49033082-49057875	0	-	49033082	49033082	8553170	6	146,115,155,178,182,84,	0,11307,13342,13986,23779,24709,
#Partially deleted in new
chr3	49076706	49094363	chr3:49076706-49094363	0	-	49076706	49077017	789624	2	332,27,	0,17630,
#Partially deleted in new
chr3	49076706	49094071	chr3:49076706-49094071	0	-	49076706	49077017	789624	2	332,178,	0,17187,
#Partially deleted in new
chr3	49076706	49094230	chr3:49076706-49094230	0	-	49076706	49077017	789624	2	332,94,	0,17430,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	49076872	49094051	chr3:49076872-49094051	0	-	49076872	49077017	789624	5	166,207,10,60,140,	0,10010,15411,15524,17039,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	49083232	49083532	chr3:49083232-49083532	3	+	49083232	49083232	8553170	1	300,	0,
#Partially deleted in new
chr3	49095931	49105135	chr3:49095931-49105135	3	-	49096028	49104733	0	24	148,126,67,128,93,105,144,88,138,93,131,109,79,100,87,86,72,61,54,65,76,110,148,519,	0,2060,2260,2421,2668,2953,3178,3412,3578,3829,4029,4258,4448,4643,5423,5688,5896,6273,6487,7413,7699,7931,8392,8685,
#Partially deleted in new
chr3	49095931	49099595	chr3:49095931-49099595	0	-	49096028	49099595	789624	8	148,67,128,93,105,144,88,86,	0,2260,2421,2668,2953,3178,3412,3578,
#Partially deleted in new
chr3	49095931	49099235	chr3:49095931-49099235	0	-	49095931	49095931	8553170	6	148,126,289,93,105,126,	0,2060,2260,2668,2953,3178,
#Partially deleted in new
chr3	49095931	49100241	chr3:49095931-49100241	0	-	49099337	49100241	789624	12	148,126,67,128,93,105,144,102,138,93,131,52,	0,2060,2260,2421,2668,2953,3178,3398,3578,3829,4029,4258,
#Partially deleted in new
chr3	49095932	49104757	chr3:49095932-49104757	0	-	49103885	49104733	789624	24	147,126,67,128,93,105,144,88,138,93,131,109,79,100,87,86,72,61,54,65,76,110,99,141,	0,2059,2259,2420,2667,2952,3177,3411,3577,3828,4028,4257,4447,4642,5422,5687,5895,6272,6486,7412,7698,7930,8440,8684,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	49095932	49098117	chr3:49095932-49098117	0	-	49097185	49098117	789624	3	147,178,126,	0,1177,2059,
#Partially deleted in new
chr3	49095932	49098524	chr3:49095932-49098524	0	-	49095932	49095932	8553170	3	147,67,172,	0,2259,2420,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr3	49095932	49104420	chr3:49095932-49104420	0	-	49097185	49104420	789624	24	147,154,126,67,128,93,105,144,88,138,93,131,109,79,100,87,86,72,61,54,65,76,110,97,	0,1201,2059,2259,2420,2667,2952,3177,3411,3577,3828,4028,4257,4447,4642,5422,5687,5895,6272,6486,7412,7698,7930,8391,
#Partially deleted in new
chr3	49095933	49098692	chr3:49095933-49098692	0	-	49095933	49095933	8553170	4	146,126,67,340,	0,2058,2258,2419,
#Partially deleted in new
chr3	49095936	49104758	chr3:49095936-49104758	1	-	49096028	49104733	0	24	143,126,67,128,93,105,144,88,138,93,131,109,79,100,87,86,72,61,54,65,76,110,115,142,	0,2055,2255,2416,2663,2948,3173,3407,3573,3824,4024,4253,4443,4638,5418,5683,5891,6268,6482,7408,7694,7926,8420,8680,
#Partially deleted in new
chr3	49095936	49099115	chr3:49095936-49099115	0	-	49098086	49099115	789624	7	143,101,67,128,93,105,6,	0,2055,2255,2416,2663,2948,3173,
#Partially deleted in new
chr3	49095938	49104532	chr3:49095938-49104532	1	-	49096028	49103646	789624	23	141,126,67,128,93,105,144,88,138,93,131,109,79,100,87,86,72,61,54,65,76,110,209,	0,2053,2253,2414,2661,2946,3171,3405,3571,3822,4022,4251,4441,4636,5416,5681,5889,6266,6480,7406,7692,7924,8385,
#Partially deleted in new
chr3	49095938	49098690	chr3:49095938-49098690	0	-	49098086	49098690	789624	4	141,126,128,91,	0,2053,2414,2661,
#Partially deleted in new
chr3	49095940	49100228	chr3:49095940-49100228	0	-	49095940	49095940	8553170	11	139,126,67,108,93,105,144,88,138,93,268,	0,2051,2251,2432,2659,2944,3169,3403,3569,3820,4020,
#Partially deleted in new
chr3	49095947	49099583	chr3:49095947-49099583	0	-	49095947	49095947	8553170	6	132,489,390,144,88,74,	0,2044,2652,3162,3396,3562,
#Partially deleted in new
chr3	49095953	49104420	chr3:49095953-49104420	0	-	49103885	49104420	789624	23	126,126,67,128,93,90,144,88,138,93,131,109,79,100,87,86,72,61,54,65,76,110,48,	0,2038,2238,2399,2646,2931,3156,3390,3556,3807,4007,4236,4426,4621,5401,5666,5874,6251,6465,7391,7677,7909,8419,
#Partially deleted in new
chr3	49095960	49099347	chr3:49095960-49099347	0	-	49095960	49095960	8553170	6	119,489,93,105,144,4,	0,2031,2639,2924,3149,3383,
#Partially deleted in new
chr3	49095993	49098989	chr3:49095993-49098989	0	-	49096051	49098989	789624	3	86,143,105,	0,2556,2891,
#Partially deleted in new
chr3	49098034	49103880	chr3:49098034-49103880	0	-	49098034	49098034	8553170	20	83,67,128,93,105,144,88,138,93,131,109,79,100,87,86,72,61,30,362,18,	0,157,318,565,850,1075,1309,1475,1726,1926,2155,2345,2540,3320,3585,3793,4170,4384,5310,5828,
#Deleted in new
chr3	49098093	49099426	chr3:49098093-49099426	0	-	49098093	49098093	8553170	7	24,60,128,93,105,144,83,	0,98,259,506,791,1016,1250,
#Deleted in new
chr3	49099239	49100421	chr3:49099239-49100421	0	-	49099239	49100421	789624	7	14,88,138,93,98,109,42,	0,104,270,521,754,950,1140,
#Deleted in new
chr3	49099402	49100102	chr3:49099402-49100102	0	-	49099402	49099402	8553170	4	29,138,93,142,	0,107,358,558,
#Deleted in new
chr3	49099589	49100667	chr3:49099589-49100667	0	-	49099589	49099589	8553170	5	58,331,109,79,93,	0,171,600,790,985,
#Deleted in new
chr3	49099853	49099914	chr3:49099853-49099914	3	-	49099853	49099853	5263520	1	61,	0,
#Partially deleted in new
chr3	49100083	49103868	chr3:49100083-49103868	0	-	49100083	49100083	8553170	11	8,109,79,100,87,86,72,61,54,65,238,	0,106,296,491,1271,1536,1744,2121,2335,3261,3547,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	49100198	49102732	chr3:49100198-49102732	0	-	49100198	49100198	8553170	8	100,79,100,87,72,61,54,138,	0,181,376,1156,1629,2006,2220,2396,
#Partially deleted in new
chr3	49100240	49104760	chr3:49100240-49104760	0	-	49100240	49104733	789624	12	58,79,100,86,72,61,54,65,76,110,148,144,	0,139,334,1379,1587,1964,2178,3104,3390,3622,4083,4376,
#Partially deleted in new
chr3	49100574	49104758	chr3:49100574-49104758	0	-	49103357	49104733	789624	11	100,87,86,72,61,54,87,76,110,148,142,	0,780,1045,1253,1630,1844,2770,3056,3288,3749,4042,
#Partially deleted in new
chr3	49100588	49104511	chr3:49100588-49104511	0	-	49100588	49103419	789624	10	86,87,86,72,61,54,87,76,110,188,	0,766,1031,1239,1616,1830,2756,3042,3274,3735,
#Partially deleted in new
chr3	49100607	49104752	chr3:49100607-49104752	0	-	49100607	49100607	8553170	10	67,87,72,61,54,65,76,110,148,136,	0,747,1220,1597,1811,2737,3023,3255,3716,4009,
#Partially deleted in new
chr3	49100630	49105123	chr3:49100630-49105123	0	-	49100630	49100630	8553170	10	110,87,72,61,54,65,76,110,148,507,	0,724,1197,1574,1788,2714,3000,3232,3693,3986,
#Partially deleted in new
chr3	49100659	49104760	chr3:49100659-49104760	0	-	49100659	49104733	789624	11	15,87,86,72,61,54,65,76,236,148,144,	0,695,960,1168,1545,1759,2685,2971,3203,3664,3957,
#Partially deleted in new
chr3	49101378	49104809	chr3:49101378-49104809	0	-	49101378	49101378	8553170	9	63,86,72,61,54,362,110,148,193,	0,241,449,826,1040,1966,2484,2945,3238,
#Partially deleted in new
chr3	49101626	49104532	chr3:49101626-49104532	0	-	49101626	49101626	8553170	7	79,72,61,54,362,110,209,	0,201,578,792,1718,2236,2697,
#Partially deleted in new
chr3	49101685	49105130	chr3:49101685-49105130	0	-	49101685	49103646	789624	9	20,72,61,54,65,76,110,148,126,	0,142,519,733,1659,1945,2177,2638,3319,
#Partially deleted in new
chr3	49101685	49104757	chr3:49101685-49104757	0	-	49103885	49104733	789624	8	20,72,61,54,65,76,110,141,	0,142,519,733,1659,1945,2177,2931,
#Partially deleted in new
chr3	49101863	49104757	chr3:49101863-49104757	0	-	49101863	49104733	789624	6	36,33,76,110,148,141,	0,1513,1767,1999,2460,2753,
#Partially deleted in new
chr3	49101883	49105071	chr3:49101883-49105071	0	-	49101883	49103419	789624	9	16,61,54,87,76,110,148,82,67,	0,321,535,1461,1747,1979,2440,2733,3121,
#Partially deleted in new
chr3	49101887	49104462	chr3:49101887-49104462	0	-	49101887	49104462	789624	7	12,61,54,122,76,110,139,	0,317,531,1457,1743,1975,2436,
#Partially deleted in new
chr3	49102251	49104763	chr3:49102251-49104763	0	-	49102251	49104733	789624	7	14,54,65,76,110,148,111,	0,167,1093,1379,1611,2072,2401,
#Partially deleted in new
chr3	49102262	49104757	chr3:49102262-49104757	0	-	49103885	49104733	789624	7	3,54,87,76,110,99,141,	0,156,1082,1368,1600,2110,2354,
#Partially deleted in new
chr3	49102419	49104752	chr3:49102419-49104752	0	-	49102419	49104733	789624	6	53,65,76,110,142,136,	0,925,1211,1443,1904,2197,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	49102606	49105101	chr3:49102606-49105101	0	-	49102606	49102606	8553170	6	81,65,76,110,148,97,	0,738,1024,1256,1717,2398,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	49102665	49104757	chr3:49102665-49104757	0	-	49103885	49104733	789624	6	67,65,76,110,99,141,	0,679,965,1197,1707,1951,
#Deleted in new
chr3	49103332	49104758	chr3:49103332-49104758	0	-	49103332	49103332	8553170	5	77,76,110,148,142,	0,298,530,991,1284,
#Deleted in new
chr3	49103344	49104444	chr3:49103344-49104444	0	-	49103344	49103344	8553170	4	87,76,236,121,	0,286,518,979,
#Deleted in new
chr3	49103344	49104759	chr3:49103344-49104759	0	-	49103885	49104733	789624	5	65,151,110,99,143,	0,211,518,1028,1272,
#Deleted in new
chr3	49103476	49104760	chr3:49103476-49104760	0	-	49103476	49103476	8553170	4	230,110,99,144,	0,386,896,1140,
#Deleted in new
chr3	49103477	49104757	chr3:49103477-49104757	0	-	49103477	49103477	8553170	4	229,236,148,141,	0,385,846,1139,
#Deleted in new
chr3	49103664	49104757	chr3:49103664-49104757	0	-	49103664	49103664	8553170	3	308,148,141,	0,659,952,
#Deleted in new
chr3	49103880	49105105	chr3:49103880-49105105	0	-	49103880	49103880	8553170	3	92,148,197,	0,443,1028,
#Deleted in new
chr3	49104014	49104759	chr3:49104014-49104759	0	-	49104014	49104014	8553170	2	457,143,	0,602,
#Partially deleted in new
chr3	49108045	49117978	chr3:49108045-49117978	0	-	49108411	49117978	789624	24	483,179,161,153,217,111,314,138,119,141,102,111,111,159,134,196,221,116,72,157,217,134,129,32,	0,2138,2398,2665,2904,3209,3454,3865,4238,4443,5946,6128,6717,6913,7182,7398,7678,8001,8234,8405,8681,9391,9611,9901,
#Partially deleted in new
chr3	49108045	49119287	chr3:49108045-49119287	1	-	49108411	49119145	789624	26	483,179,161,153,217,111,314,138,119,141,102,111,111,159,134,196,221,116,72,157,217,300,134,129,33,266,	0,2138,2398,2665,2904,3209,3454,3865,4238,4443,5946,6128,6717,6913,7182,7398,7678,8001,8234,8405,8681,9013,9391,9611,9901,10976,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr3	49108049	49120808	chr3:49108049-49120808	1	-	49108411	49119145	0	27	479,179,161,153,217,111,314,138,119,141,102,111,111,159,134,196,221,116,72,157,217,303,134,174,174,260,53,	0,2134,2394,2661,2900,3205,3450,3861,4234,4439,5942,6124,6713,6909,7178,7394,7674,7997,8230,8401,8677,9009,9387,9607,9897,10972,12706,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr3	49108130	49120938	chr3:49108130-49120938	1	-	49108411	49119145	0	27	398,179,161,153,217,111,314,138,119,141,102,111,111,159,134,196,215,116,72,157,217,303,104,174,174,260,183,	0,2053,2313,2580,2819,3124,3369,3780,4153,4358,5861,6043,6632,6828,7097,7313,7593,7916,8149,8320,8596,8928,9336,9526,9816,10891,12625,
#Partially deleted in new
chr3	49108672	49120879	chr3:49108672-49120879	1	-	49108957	49119145	789624	27	513,179,161,153,217,111,314,138,119,141,102,111,111,159,134,196,221,116,72,157,217,300,134,129,33,260,124,	0,1511,1771,2038,2277,2582,2827,3238,3611,3816,5319,5501,6090,6286,6555,6771,7051,7374,7607,7778,8054,8386,8764,8984,9274,10349,12083,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr3	49108674	49120938	chr3:49108674-49120938	3	-	49108957	49119145	0	26	511,179,161,153,217,111,314,138,119,141,102,111,111,159,134,196,215,116,72,157,217,134,174,174,260,183,	0,1509,1769,2036,2275,2580,2825,3236,3609,3814,5317,5499,6088,6284,6553,6769,7049,7372,7605,7776,8052,8762,8982,9272,10347,12081,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr3	49108752	49120831	chr3:49108752-49120831	1	-	49108957	49119145	0	27	433,179,161,153,217,111,314,138,119,141,102,111,111,159,134,196,215,116,72,157,217,303,134,174,174,260,76,	0,1431,1691,1958,2197,2502,2747,3158,3531,3736,5239,5421,6010,6206,6475,6691,6971,7294,7527,7698,7974,8306,8684,8904,9194,10269,12003,
#Deleted in new
chr3	49110012	49110757	chr3:49110012-49110757	0	-	49110012	49110012	8553170	3	350,161,47,	0,431,698,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	49115580	49120818	chr3:49115580-49120818	0	-	49115580	49119145	789624	12	59,221,116,72,157,217,303,134,129,174,260,63,	0,143,466,699,870,1146,1478,1856,2076,2366,3441,5175,
#Deleted in new
chr3	49116047	49117711	chr3:49116047-49117711	0	-	49116047	49116047	8553170	5	115,72,157,217,55,	0,232,403,679,1609,
#Deleted in new
chr3	49116733	49117358	chr3:49116733-49117358	0	-	49116733	49117358	789624	2	210,150,	0,475,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	49117118	49120931	chr3:49117118-49120931	0	-	49117118	49117118	8553170	6	243,134,129,174,260,176,	0,318,538,828,1903,3637,
#Deleted in new
chr3	49117200	49117788	chr3:49117200-49117788	0	-	49117200	49117200	8553170	3	161,104,132,	0,266,456,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	49117303	49120874	chr3:49117303-49120874	0	-	49117303	49117303	8553170	6	58,134,174,174,260,119,	0,133,353,643,1718,3452,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	49117964	49120668	chr3:49117964-49120668	0	-	49117964	49117964	8553170	3	156,260,201,	0,1057,2503,
#Partially deleted in new
chr3	49121113	49133118	chr3:49121113-49133118	3	-	49121225	49132867	789624	33	249,160,177,142,208,349,242,185,373,97,218,225,164,232,144,193,133,128,159,133,80,113,180,189,121,203,64,189,74,136,173,77,164,	0,319,570,830,1049,1590,2018,2333,2614,3076,3281,3587,3892,4139,4633,4853,5251,7344,7547,7906,8131,8490,8725,9117,9626,9836,10265,10421,11002,11156,11377,11678,11841,
#Deleted in new
chr3	49121113	49121976	chr3:49121113-49121976	0	-	49121113	49121113	8553170	3	479,177,33,	0,570,830,
#Deleted in new
chr3	49121114	49121596	chr3:49121114-49121596	0	-	49121114	49121114	8553170	2	248,164,	0,318,
#Partially deleted in new
chr3	49121132	49133020	chr3:49121132-49133020	1	-	49121225	49132867	789624	32	230,160,177,142,208,349,242,185,373,97,218,225,164,232,144,193,133,128,159,133,80,113,180,189,121,203,64,189,74,136,173,229,	0,300,551,811,1030,1571,1999,2314,2595,3057,3262,3568,3873,4120,4614,4834,5232,7325,7528,7887,8112,8471,8706,9098,9607,9817,10246,10402,10983,11137,11358,11659,
#Deleted in new
chr3	49121256	49122598	chr3:49121256-49122598	0	-	49121256	49121256	8553170	5	106,160,177,142,436,	0,176,427,687,906,
#Deleted in new
chr3	49122493	49123754	chr3:49122493-49123754	0	-	49122493	49122493	8553170	3	880,185,27,	0,953,1234,
#Deleted in new
chr3	49123324	49123955	chr3:49123324-49123955	0	-	49123324	49123324	8553170	2	307,228,	0,403,
#Deleted in new
chr3	49123719	49124479	chr3:49123719-49124479	0	-	49123719	49123719	8553170	3	381,97,85,	0,470,675,
#Deleted in new
chr3	49123958	49124623	chr3:49123958-49124623	0	-	49123958	49123958	8553170	2	142,434,	0,231,
#Deleted in new
chr3	49124442	49125204	chr3:49124442-49125204	0	-	49124442	49124442	8553170	3	170,225,199,	0,258,563,
#Deleted in new
chr3	49124680	49125379	chr3:49124680-49125379	0	-	49124680	49124680	8553170	3	245,164,127,	0,325,572,
#Deleted in new
chr3	49124810	49125721	chr3:49124810-49125721	0	-	49124810	49124810	8553170	3	115,164,453,	0,195,458,
#Deleted in new
chr3	49124851	49125572	chr3:49124851-49125572	0	-	49124851	49124851	8553170	3	74,164,320,	0,154,401,
#Partially deleted in new
chr3	49125004	49128556	chr3:49125004-49128556	0	-	49125004	49125004	8553170	4	165,193,133,99,	0,962,1360,3453,
#Deleted in new
chr3	49125286	49126183	chr3:49125286-49126183	0	-	49125286	49125286	8553170	3	198,144,217,	0,460,680,
#Deleted in new
chr3	49125539	49126425	chr3:49125539-49126425	0	-	49125539	49125539	8553170	3	351,193,61,	0,427,825,
#Partially deleted in new
chr3	49126362	49128740	chr3:49126362-49128740	0	-	49126362	49126362	8553170	3	135,128,80,	0,2095,2298,
#Deleted in new
chr3	49128572	49129272	chr3:49128572-49129272	0	-	49128572	49128572	8553170	3	247,133,28,	0,447,672,
#Deleted in new
chr3	49130964	49133056	chr3:49130964-49133056	0	-	49130964	49132127	789624	5	188,64,189,39,102,	0,414,570,1151,1990,
#Partially deleted in new
chr3	49140085	49160851	chr3:49140085-49160851	7	-	49140085	49140085	16724991	14	76,82,109,164,148,83,102,392,161,71,173,64,141,33,	0,2091,3432,3937,4212,4503,4695,13061,13567,13855,14039,18666,18801,20733,
#Deleted in new
chr3	49162534	49166321	chr3:49162534-49166321	3	-	49162804	49164208	789624	2	1726,55,	0,3732,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	49171610	49176486	chr3:49171610-49176486	3	+	49172769	49175801	789624	6	75,510,165,225,102,882,	0,1025,2628,3131,3451,3994,
#Deleted in new
chr3	49171621	49175167	chr3:49171621-49175167	0	+	49171621	49171621	8553170	5	64,166,165,225,106,	0,1014,2617,3120,3440,
#Deleted in new
chr3	49172712	49174966	chr3:49172712-49174966	0	+	49172712	49172712	8553170	3	463,165,225,	0,1526,2029,
#Deleted in new
chr3	49174187	49175186	chr3:49174187-49175186	0	+	49174187	49174187	8553170	2	216,445,	0,554,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	49174932	49176402	chr3:49174932-49176402	0	+	49174932	49174932	8553170	2	34,798,	0,672,
#Partially deleted in new
chr3	49177631	49191858	chr3:49177631-49191858	3	-	49177635	49191771	789624	4	421,57,114,114,	0,850,12393,14113,
#Partially deleted in new
chr3	49177635	49191822	chr3:49177635-49191822	1	-	49177635	49191771	789624	4	420,57,114,78,	0,846,12389,14109,
#Partially deleted in new
chr3	49177635	49190024	chr3:49177635-49190024	0	-	49177635	49177635	8553170	3	420,57,174,	0,846,12215,
#Partially deleted in new
chr3	49198886	49258104	chr3:49198886-49258104	1	+	49211780	49257282	789624	8	221,71,175,164,49,88,104,1971,	0,12879,37661,42339,45517,45759,56503,57247,
#Partially deleted in new
chr3	49199499	49257723	chr3:49199499-49257723	1	+	49211780	49257282	789624	8	74,71,175,164,49,88,104,1590,	0,12266,37048,41726,44904,45146,55890,56634,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	49199509	49245739	chr3:49199509-49245739	1	+	49211780	49244862	789624	5	64,71,175,164,1094,	0,12256,37038,41716,45136,
#Partially deleted in new
chr3	49199616	49236574	chr3:49199616-49236574	0	+	49199616	49199616	8553170	2	253,27,	0,36931,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	49252128	49252264	chr3:49252128-49252264	7	-	49252128	49252128	16724991	1	136,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	49260084	49261311	chr3:49260084-49261311	0	+	49260084	49260084	8553170	1	1227,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	49260084	49261316	chr3:49260084-49261316	3	+	49260084	49260084	8553170	1	1232,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	49268601	49274534	chr3:49268601-49274534	0	-	49268601	49268601	8553170	2	2844,486,	0,5447,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	49268785	49277909	chr3:49268785-49277909	3	-	49271179	49276872	789624	3	2660,92,1483,	0,5263,7641,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	49270131	49270239	chr3:49270131-49270239	3	+	49270131	49270131	8553170	1	108,	0,
#Partially deleted in new
chr3	49271202	49276842	chr3:49271202-49276842	0	-	49274110	49276842	789624	3	243,92,267,	0,2846,5373,
#Partially deleted in new
chr3	49271405	49277219	chr3:49271405-49277219	0	-	49271405	49277210	789624	4	40,92,415,34,	0,2643,5021,5780,
#Deleted in new
chr3	49274119	49274186	chr3:49274119-49274186	3	+	49274119	49274119	5263520	1	67,	0,
#Partially deleted in new
chr3	49277830	49340033	chr3:49277830-49340033	1	-	49278292	49340024	0	21	621,89,104,150,119,71,228,89,192,95,84,225,159,174,118,62,146,127,131,128,110,	0,983,2913,6156,6635,7018,8267,14679,16576,20039,20721,22636,24553,27884,32789,46871,47063,47888,49855,57638,62093,
#Partially deleted in new
chr3	49278105	49340071	chr3:49278105-49340071	3	-	49278292	49340024	0	22	346,89,104,150,119,71,228,89,192,95,84,225,159,174,118,141,62,146,127,131,128,148,	0,708,2638,5881,6360,6743,7992,14404,16301,19764,20446,22361,24278,27609,32514,33408,46596,46788,47613,49580,57363,61818,
#Partially deleted in new
chr3	49278142	49279231	chr3:49278142-49279231	0	-	49278142	49278142	8553170	2	309,418,	0,671,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	49278157	49312863	chr3:49278157-49312863	0	-	49278157	49278157	8553170	16	294,89,104,150,119,71,228,89,192,95,84,225,159,174,118,1350,	0,656,2586,5829,6308,6691,7940,14352,16249,19712,20394,22309,24226,27557,32462,33356,
#Partially deleted in new
chr3	49278169	49311618	chr3:49278169-49311618	0	-	49278446	49311618	789624	15	282,104,150,119,71,228,89,192,95,84,225,105,174,118,105,	0,2574,5817,6296,6679,7928,14340,16237,19700,20382,22297,24268,27545,32450,33344,
#Partially deleted in new
chr3	49297869	49340029	chr3:49297869-49340029	0	-	49297869	49297869	8553170	6	95,84,159,174,131,106,	0,682,4514,7845,29816,42054,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	49300594	49318774	chr3:49300594-49318774	0	-	49300594	49300594	8553170	6	97,159,174,118,141,466,	0,1789,5120,10025,10919,17714,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	49305777	49314044	chr3:49305777-49314044	0	-	49305777	49305777	8553170	4	111,118,141,174,	0,4842,5736,8093,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	49311784	49340036	chr3:49311784-49340036	1	-	49312366	49340024	0	7	829,62,146,127,131,128,113,	0,12917,13109,13934,15901,23684,28139,
#Partially deleted in new
chr3	49316731	49340036	chr3:49316731-49340036	1	-	49317081	49340024	789624	7	747,62,146,127,131,128,113,	0,7970,8162,8987,10954,18737,23192,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	49317118	49318657	chr3:49317118-49318657	0	-	49317118	49317118	8553170	2	360,349,	0,1190,
#Partially deleted in new
chr3	49324696	49340053	chr3:49324696-49340053	0	-	49324696	49324696	8553170	5	67,146,127,131,130,	0,197,1022,2989,15227,
#Partially deleted in new
chr3	49324703	49340712	chr3:49324703-49340712	0	-	49324703	49324703	8553170	6	60,146,127,131,128,229,	0,190,1015,2982,10765,15780,
#Deleted in new
chr3	49357170	49358600	chr3:49357170-49358600	3	-	49357387	49358278	0	2	577,574,	0,856,
#Deleted in new
chr3	49357177	49358312	chr3:49357177-49358312	1	-	49357981	49358278	0	1	1135,	0,
#Deleted in new
chr3	49357179	49358358	chr3:49357179-49358358	1	-	49357387	49358278	789624	3	568,105,224,	0,847,955,
#Deleted in new
chr3	49357200	49358325	chr3:49357200-49358325	1	-	49357387	49358278	789624	2	547,161,	0,964,
#Deleted in new
chr3	49357476	49358325	chr3:49357476-49358325	1	-	49357505	49358278	8553170	2	290,299,	0,550,
#Deleted in new
chr3	49357607	49358325	chr3:49357607-49358325	1	-	49357825	49358278	8553170	2	281,299,	0,419,
#Partially deleted in new
chr3	49359144	49412202	chr3:49359144-49412202	3	-	49360208	49375589	0	5	1238,131,121,158,383,	0,3351,9283,16289,52675,
#Partially deleted in new
chr3	49359891	49411928	chr3:49359891-49411928	1	-	49362509	49375589	789624	4	491,131,158,109,	0,2604,15542,51928,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	49360121	49411970	chr3:49360121-49411970	1	-	49360365	49375589	789624	6	261,139,131,121,158,151,	0,806,2374,8306,15312,51698,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	49362516	49411968	chr3:49362516-49411968	0	-	49362516	49375589	789624	5	110,121,158,95,149,	0,5911,12917,44195,49303,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	49365144	49367006	chr3:49365144-49367006	3	-	49365144	49365144	8553170	2	80,437,	0,1425,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	49373239	49412097	chr3:49373239-49412097	0	-	49373239	49373239	8553170	3	103,158,278,	0,2194,38580,
#Deleted in new
chr3	49411944	49412998	chr3:49411944-49412998	0	-	49411944	49411944	8553170	3	174,199,15,	0,459,1039,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	49412205	49416475	chr3:49412205-49416475	3	+	49412426	49414862	789624	3	435,55,1656,	0,850,2614,
#Deleted in new
chr3	49412211	49413426	chr3:49412211-49413426	0	+	49412211	49412211	8553170	2	429,371,	0,844,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	49412364	49415265	chr3:49412364-49415265	0	+	49412364	49412364	8553170	3	276,170,446,	0,576,2455,
#Deleted in new
chr3	49412390	49413272	chr3:49412390-49413272	0	+	49412390	49412390	8553170	2	250,340,	0,542,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	49412399	49415442	chr3:49412399-49415442	0	+	49412399	49412399	8553170	3	403,55,623,	0,656,2420,
#Deleted in new
chr3	49412416	49413133	chr3:49412416-49413133	0	+	49412416	49412416	8553170	2	386,201,	0,516,
#Partially deleted in new
chr3	49416774	49422753	chr3:49416774-49422753	3	-	49417539	49422450	0	9	944,156,181,146,79,132,81,168,393,	0,1043,2196,2485,2935,3436,4717,5329,5586,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	49416776	49429314	chr3:49416776-49429314	0	-	49424832	49429239	8553170	14	942,156,181,146,79,132,81,168,1893,105,72,114,177,207,	0,1041,2194,2483,2933,3434,4715,5327,6205,8172,8590,9106,9475,12331,
#Partially deleted in new
chr3	49416777	49422554	chr3:49416777-49422554	1	-	49417343	49422450	0	10	590,104,156,181,146,79,132,81,168,194,	0,837,1040,2193,2482,2932,3433,4714,5326,5583,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	49416777	49422469	chr3:49416777-49422469	0	-	49416777	49416777	8553170	5	941,156,2602,168,109,	0,1040,2193,5326,5583,
#Partially deleted in new
chr3	49416777	49422460	chr3:49416777-49422460	1	-	49417539	49422450	789624	5	941,156,181,168,100,	0,1040,2193,5326,5583,
#Partially deleted in new
chr3	49416778	49422469	chr3:49416778-49422469	1	-	49417539	49422450	0	8	940,156,181,146,79,81,168,109,	0,1039,2192,2481,2931,4713,5325,5582,
#Partially deleted in new
chr3	49416778	49422529	chr3:49416778-49422529	1	-	49417539	49422217	789624	9	940,156,181,146,79,132,81,154,169,	0,1039,2192,2481,2931,3432,4713,5325,5582,
#Partially deleted in new
chr3	49416779	49422457	chr3:49416779-49422457	1	-	49417539	49422450	789624	8	939,181,146,79,132,81,168,97,	0,2191,2480,2930,3431,4712,5324,5581,
#Partially deleted in new
chr3	49416790	49422454	chr3:49416790-49422454	0	-	49416790	49416790	8553170	7	928,156,181,1083,81,154,94,	0,1027,2180,2469,4701,5313,5570,
#Partially deleted in new
chr3	49416793	49422463	chr3:49416793-49422463	0	-	49416793	49416793	8553170	8	925,156,181,146,633,81,154,103,	0,1024,2177,2466,2916,4698,5310,5567,
#Partially deleted in new
chr3	49416793	49429310	chr3:49416793-49429310	3	-	49417539	49429239	789624	11	925,156,181,146,79,132,81,72,114,177,203,	0,1024,2177,2466,2916,3417,4698,8573,9089,9458,12314,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	49416793	49423643	chr3:49416793-49423643	0	-	49416793	49416793	8553170	8	925,156,181,146,79,132,81,1540,	0,1024,2177,2466,2916,3417,4698,5310,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	49416793	49418372	chr3:49416793-49418372	0	-	49416793	49416793	8553170	1	1579,	0,
#Partially deleted in new
chr3	49416793	49422393	chr3:49416793-49422393	0	-	49416793	49416793	8553170	9	574,104,156,181,146,633,81,168,33,	0,821,1024,2177,2466,2916,4698,5310,5567,
#Partially deleted in new
chr3	49416793	49422473	chr3:49416793-49422473	0	-	49416793	49416793	8553170	8	925,156,181,146,633,81,168,113,	0,1024,2177,2466,2916,4698,5310,5567,
#Partially deleted in new
chr3	49416793	49422172	chr3:49416793-49422172	0	-	49417339	49422172	789624	9	564,104,156,181,146,79,132,81,69,	0,821,1024,2177,2466,2916,3417,4698,5310,
#Partially deleted in new
chr3	49416793	49422463	chr3:49416793-49422463	0	-	49416793	49416793	8553170	7	925,156,435,79,132,81,360,	0,1024,2177,2916,3417,4698,5310,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	49416794	49423856	chr3:49416794-49423856	0	-	49416794	49416794	8553170	6	924,156,181,1083,81,1753,	0,1023,2176,2465,4697,5309,
#Partially deleted in new
chr3	49416796	49422353	chr3:49416796-49422353	0	-	49416796	49416796	8553170	6	922,156,181,633,81,250,	0,1021,2174,2913,4695,5307,
#Partially deleted in new
chr3	49416797	49422593	chr3:49416797-49422593	0	-	49416797	49416797	8553170	7	921,156,181,79,132,81,490,	0,1020,2173,2912,3413,4694,5306,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	49416797	49422469	chr3:49416797-49422469	0	-	49416797	49416797	8553170	7	921,156,62,1372,81,154,109,	0,1020,1369,2173,4694,5306,5563,
#Partially deleted in new
chr3	49416797	49422491	chr3:49416797-49422491	0	-	49416797	49416797	8553170	6	921,156,1372,81,154,131,	0,1020,2173,4694,5306,5563,
#Partially deleted in new
chr3	49416800	49422491	chr3:49416800-49422491	1	-	49417539	49422450	789624	6	918,79,132,81,168,131,	0,2909,3410,4691,5303,5560,
#Partially deleted in new
chr3	49416804	49429284	chr3:49416804-49429284	0	-	49424832	49429239	8553170	14	914,156,181,146,79,128,81,168,648,105,72,114,177,177,	0,1013,2166,2455,2905,3410,4687,5299,7422,8144,8562,9078,9447,12303,
#Partially deleted in new
chr3	49416821	49422469	chr3:49416821-49422469	0	-	49416821	49416821	8553170	9	546,104,156,181,146,633,81,154,109,	0,793,996,2149,2438,2888,4670,5282,5539,
#Partially deleted in new
chr3	49416821	49422454	chr3:49416821-49422454	0	-	49416821	49416821	8553170	6	897,156,1372,81,168,94,	0,996,2149,4670,5282,5539,
#Partially deleted in new
chr3	49416821	49419026	chr3:49416821-49419026	0	-	49417186	49419026	789624	4	488,104,156,56,	0,793,996,2149,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	49416823	49422463	chr3:49416823-49422463	0	-	49416823	49416823	8553170	3	895,156,3493,	0,994,2147,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	49416823	49429294	chr3:49416823-49429294	0	-	49416823	49416823	8553170	8	895,156,181,1083,3947,114,177,187,	0,994,2147,2436,4668,9059,9428,12284,
#Partially deleted in new
chr3	49416823	49422458	chr3:49416823-49422458	0	-	49416823	49416823	8553170	7	895,156,181,1083,81,168,98,	0,994,2147,2436,4668,5280,5537,
#Partially deleted in new
chr3	49416823	49422460	chr3:49416823-49422460	0	-	49416823	49416823	8553170	7	895,156,435,633,81,168,100,	0,994,2147,2886,4668,5280,5537,
#Partially deleted in new
chr3	49416823	49422454	chr3:49416823-49422454	0	-	49416823	49416823	8553170	7	895,156,435,633,81,154,94,	0,994,2147,2886,4668,5280,5537,
#Partially deleted in new
chr3	49416825	49422451	chr3:49416825-49422451	0	-	49422019	49422450	789624	9	893,156,181,146,79,132,81,68,91,	0,992,2145,2434,2884,3385,4666,5156,5535,
#Partially deleted in new
chr3	49416826	49422451	chr3:49416826-49422451	0	-	49419020	49422450	789624	8	892,156,181,79,132,81,168,91,	0,991,2144,2883,3384,4665,5277,5534,
#Partially deleted in new
chr3	49416828	49422238	chr3:49416828-49422238	0	-	49416828	49416828	8553170	7	890,156,181,76,633,81,135,	0,989,2142,2431,2881,4663,5275,
#Partially deleted in new
chr3	49416828	49422467	chr3:49416828-49422467	1	-	49417539	49422217	789624	9	890,156,181,134,79,132,81,154,107,	0,989,2142,2431,2881,3382,4663,5275,5532,
#Partially deleted in new
chr3	49416833	49419954	chr3:49416833-49419954	0	-	49416833	49416833	8553170	3	885,146,245,	0,2426,2876,
#Partially deleted in new
chr3	49416835	49422353	chr3:49416835-49422353	0	-	49416835	49416835	8553170	7	883,156,181,146,633,81,250,	0,982,2135,2424,2874,4656,5268,
#Partially deleted in new
chr3	49416836	49422473	chr3:49416836-49422473	1	-	49417343	49422450	789624	9	531,104,156,181,146,79,132,168,113,	0,778,981,2134,2423,2873,3374,5267,5524,
#Partially deleted in new
chr3	49416852	49422458	chr3:49416852-49422458	1	-	49417343	49422217	789624	10	515,104,156,181,146,79,132,81,154,98,	0,762,965,2118,2407,2857,3358,4639,5251,5508,
#Partially deleted in new
chr3	49416860	49422442	chr3:49416860-49422442	0	-	49416860	49416860	8553170	8	858,156,435,79,132,81,168,82,	0,957,2110,2849,3350,4631,5243,5500,
#Deleted in new
chr3	49416869	49418142	chr3:49416869-49418142	0	-	49416869	49416869	8553170	2	849,325,	0,948,
#Partially deleted in new
chr3	49416879	49422172	chr3:49416879-49422172	0	-	49419020	49422172	789624	5	839,156,181,79,69,	0,938,2091,2830,5224,
#Partially deleted in new
chr3	49416897	49422460	chr3:49416897-49422460	1	-	49417539	49422450	789624	8	821,156,181,146,79,132,168,100,	0,920,2073,2362,2812,3313,5206,5463,
#Partially deleted in new
chr3	49416901	49422454	chr3:49416901-49422454	0	-	49416901	49416901	8553170	9	466,104,156,181,76,633,81,154,94,	0,713,916,2069,2358,2808,4590,5202,5459,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	49416901	49425973	chr3:49416901-49425973	0	-	49424832	49425973	789624	12	466,230,156,181,146,79,132,81,2771,105,72,91,	0,587,916,2069,2358,2808,3309,4590,5202,8047,8465,8981,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	49416939	49422431	chr3:49416939-49422431	0	-	49416939	49416939	8553170	4	779,156,2602,328,	0,878,2031,5164,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	49416963	49422458	chr3:49416963-49422458	0	-	49416963	49416963	8553170	2	755,2749,	0,2746,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	49416968	49422469	chr3:49416968-49422469	0	-	49416968	49416968	8553170	6	750,156,181,2313,168,109,	0,849,2002,2291,5135,5392,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	49416984	49422473	chr3:49416984-49422473	0	-	49416984	49416984	8553170	9	734,156,62,181,146,633,81,154,113,	0,833,1182,1986,2275,2725,4507,5119,5376,
#Partially deleted in new
chr3	49416986	49422473	chr3:49416986-49422473	1	-	49417539	49422450	0	8	732,156,181,146,79,132,81,113,	0,831,1984,2273,2723,3224,4505,5374,
#Partially deleted in new
chr3	49416993	49422454	chr3:49416993-49422454	0	-	49416993	49416993	8553170	9	364,104,156,435,79,132,81,168,94,	0,621,824,1977,2716,3217,4498,5110,5367,
#Partially deleted in new
chr3	49417044	49422454	chr3:49417044-49422454	0	-	49422019	49422450	789624	7	674,41,435,633,81,68,94,	0,888,1926,2665,4447,4937,5316,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	49417202	49429238	chr3:49417202-49429238	0	-	49424832	49429238	789624	12	516,156,181,146,633,81,2771,105,72,114,177,131,	0,615,1768,2057,2507,4289,4901,7746,8164,8680,9049,11905,
#Partially deleted in new
chr3	49417433	49419850	chr3:49417433-49419850	0	-	49417433	49417433	8553170	2	285,591,	0,1826,
#Partially deleted in new
chr3	49417506	49422420	chr3:49417506-49422420	0	-	49419327	49422420	789624	8	212,156,181,76,79,132,81,60,	0,311,1464,1753,2203,2704,3985,4854,
#Partially deleted in new
chr3	49417529	49422451	chr3:49417529-49422451	0	-	49417529	49417529	8553170	5	189,146,79,81,348,	0,1730,2180,3962,4574,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	49418605	49422468	chr3:49418605-49422468	0	-	49418605	49418605	8553170	3	2967,168,108,	0,3498,3755,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	49418692	49422472	chr3:49418692-49422472	0	-	49418692	49418692	8553170	1	3780,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	49418782	49421803	chr3:49418782-49421803	0	-	49418782	49418782	8553170	2	1560,312,	0,2709,
#Partially deleted in new
chr3	49418990	49422469	chr3:49418990-49422469	0	-	49422019	49422450	789624	7	161,146,79,132,81,90,109,	0,269,719,1220,2501,2969,3370,
#Partially deleted in new
chr3	49419287	49422012	chr3:49419287-49422012	0	-	49419287	49419287	8553170	4	118,79,132,521,	0,422,923,2204,
#Partially deleted in new
chr3	49419770	49422685	chr3:49419770-49422685	0	-	49419770	49421539	789624	5	18,132,81,68,247,	0,440,1721,2211,2668,
#Partially deleted in new
chr3	49420215	49423301	chr3:49420215-49423301	0	-	49420215	49420215	8553170	4	127,81,168,220,	0,1276,1888,2866,
#Deleted in new
chr3	49421740	49422448	chr3:49421740-49422448	0	-	49421740	49421740	8553170	2	531,88,	0,620,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	49422945	49429326	chr3:49422945-49429326	3	-	49424832	49429239	789624	6	1929,105,72,114,177,219,	0,2003,2421,2937,3306,6162,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	49422946	49429288	chr3:49422946-49429288	1	-	49424832	49429239	789624	7	559,713,105,72,114,177,181,	0,1215,2002,2420,2936,3305,6161,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	49422992	49429308	chr3:49422992-49429308	0	-	49424832	49429239	789624	7	571,800,105,72,114,177,201,	0,1082,1956,2374,2890,3259,6115,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	49424074	49429275	chr3:49424074-49429275	0	-	49424074	49424074	8553170	5	800,490,114,171,168,	0,874,1808,2177,5033,
#Partially deleted in new
chr3	49424176	49429326	chr3:49424176-49429326	1	-	49424832	49429239	789624	5	698,105,72,177,219,	0,772,1190,2075,4931,
#Partially deleted in new
chr3	49424948	49429288	chr3:49424948-49429288	0	-	49424948	49424948	8553170	5	198,72,114,177,181,	0,418,934,1303,4159,
#Partially deleted in new
chr3	49425271	49429294	chr3:49425271-49429294	0	-	49425271	49425271	8553170	4	167,114,177,187,	0,611,980,3836,
#Deleted in new
chr3	49425297	49426407	chr3:49425297-49426407	0	-	49425297	49425297	8553170	3	141,114,156,	0,585,954,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	49467114	49467228	chr3:49467114-49467228	7	-	49467114	49467114	16724991	1	114,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	49468702	49535618	chr3:49468702-49535618	3	+	49510534	49533199	0	3	353,401,4822,	0,41716,62094,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	49468712	49510636	chr3:49468712-49510636	0	+	49468712	49468712	8553170	2	343,218,	0,41706,
#Partially deleted in new
chr3	49470131	49535615	chr3:49470131-49535615	1	+	49510534	49533199	0	3	302,401,4819,	0,40287,60665,
#Partially deleted in new
chr3	49470131	49530831	chr3:49470131-49530831	0	+	49510534	49530831	789624	3	143,401,35,	0,40287,60665,
#Partially deleted in new
chr3	49470131	49535618	chr3:49470131-49535618	1	+	49510534	49533199	0	4	302,57,401,4822,	0,6717,40287,60665,
#Partially deleted in new
chr3	49470131	49535618	chr3:49470131-49535618	1	+	49510534	49533199	0	3	442,401,4822,	0,40287,60665,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	49470131	49535618	chr3:49470131-49535618	1	+	49510534	49533199	0	4	302,151,401,4822,	0,22691,40287,60665,
#Partially deleted in new
chr3	49470131	49535618	chr3:49470131-49535618	1	+	49510534	49533199	0	6	302,85,57,162,401,4822,	0,833,6717,17122,40287,60665,
#Partially deleted in new
chr3	49470135	49510799	chr3:49470135-49510799	0	+	49510534	49510799	789624	3	298,52,381,	0,6713,40283,
#Partially deleted in new
chr3	49470246	49530864	chr3:49470246-49530864	0	+	49510534	49530864	789624	4	28,52,401,68,	0,6602,40172,60550,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	49470276	49510657	chr3:49470276-49510657	0	+	49510534	49510657	789624	3	157,151,239,	0,22546,40142,
#Partially deleted in new
chr3	49470278	49510794	chr3:49470278-49510794	0	+	49510534	49510794	789624	3	155,57,376,	0,6570,40140,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	49470288	49510490	chr3:49470288-49510490	0	+	49470288	49470288	8553170	3	145,147,72,	0,22538,40130,
#Partially deleted in new
chr3	49470299	49510821	chr3:49470299-49510821	0	+	49510534	49510821	789624	5	134,85,57,162,403,	0,665,6549,16954,40119,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	49470301	49487415	chr3:49470301-49487415	0	+	49470301	49470301	8553170	3	132,52,188,	0,6547,16926,
#Partially deleted in new
chr3	49470305	49531211	chr3:49470305-49531211	0	+	49470305	49470305	8553170	3	128,37,415,	0,40113,60491,
#Partially deleted in new
chr3	49470318	49510560	chr3:49470318-49510560	0	+	49510534	49510560	789624	2	255,142,	0,40100,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	49492715	49510741	chr3:49492715-49510741	0	+	49492715	49492715	8553170	2	258,323,	0,17703,
#Partially deleted in new
chr3	49510223	49530911	chr3:49510223-49530911	0	+	49510223	49510223	8553170	2	596,115,	0,20573,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	49549305	49554366	chr3:49549305-49554366	3	-	49549305	49549305	789624	3	2137,140,326,	0,4242,4735,
#Partially deleted in new
chr3	49551294	49554340	chr3:49551294-49554340	0	-	49551294	49551294	8553170	3	148,118,300,	0,2253,2746,
#Partially deleted in new
chr3	49554488	49671545	chr3:49554488-49671545	3	+	49554602	49664839	789624	12	338,409,885,468,6654,2077,791,100,132,55,90,3956,	0,70486,87779,96123,97054,105997,108387,109298,109934,110310,110740,113101,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	49640482	49641769	chr3:49640482-49641769	3	-	49640482	49640482	8553170	2	311,150,	0,1137,
#Deleted in new
chr3	49643028	49651349	chr3:49643028-49651349	0	+	49643028	49643028	8553170	2	124,738,	0,7583,
#Deleted in new
chr3	49674001	49683963	chr3:49674001-49683963	3	+	49674401	49683342	789624	22	412,133,127,94,76,164,138,92,41,122,61,98,52,89,139,84,81,89,191,103,107,727,	0,487,1181,1692,1889,2054,2376,2607,2775,2901,3571,4850,5591,6539,7099,7720,7885,8346,8544,8841,9038,9235,
#Deleted in new
chr3	49674013	49677025	chr3:49674013-49677025	0	+	49675724	49677025	789624	8	97,94,76,164,138,92,41,123,	0,1680,1877,2042,2364,2595,2763,2889,
#Deleted in new
chr3	49674033	49676352	chr3:49674033-49676352	0	+	49674033	49674033	8553170	4	77,605,76,297,	0,1149,1857,2022,
#Deleted in new
chr3	49674359	49679645	chr3:49674359-49679645	0	+	49674401	49675961	789624	10	54,94,76,164,92,41,122,61,98,53,	0,1334,1531,1696,2249,2417,2543,3213,4492,5233,
#Deleted in new
chr3	49674361	49676516	chr3:49674361-49676516	0	+	49674361	49674361	8553170	5	260,94,76,164,139,	0,1332,1529,1694,2016,
#Deleted in new
chr3	49674366	49683342	chr3:49674366-49683342	1	+	49674401	49683342	789624	22	47,133,127,94,76,164,138,92,41,122,61,98,52,89,139,84,81,89,191,118,107,106,	0,122,816,1327,1524,1689,2011,2242,2410,2536,3206,4485,5226,6174,6734,7355,7520,7981,8179,8461,8673,8870,
#Deleted in new
chr3	49674366	49678940	chr3:49674366-49678940	0	+	49674366	49678940	789624	10	47,94,76,164,138,92,41,122,61,89,	0,1327,1524,1689,2011,2242,2410,2536,3206,4485,
#Deleted in new
chr3	49674378	49676995	chr3:49674378-49676995	0	+	49674378	49674378	8553170	8	35,133,94,76,460,92,41,93,	0,110,1315,1512,1677,2230,2398,2524,
#Deleted in new
chr3	49674382	49676506	chr3:49674382-49676506	0	+	49674382	49674382	8553170	6	239,127,94,76,164,129,	0,800,1311,1508,1673,1995,
#Deleted in new
chr3	49674384	49679645	chr3:49674384-49679645	0	+	49674401	49675701	789624	11	29,133,94,76,164,92,41,122,61,98,53,	0,104,1309,1506,1671,2224,2392,2518,3188,4467,5208,
#Deleted in new
chr3	49674485	49677025	chr3:49674485-49677025	0	+	49674485	49677025	789624	8	136,127,94,76,164,92,41,123,	0,697,1208,1405,1570,2123,2291,2417,
#Deleted in new
chr3	49674485	49676232	chr3:49674485-49676232	0	+	49674485	49674485	8553170	4	136,127,94,342,	0,697,1208,1405,
#Deleted in new
chr3	49675693	49678935	chr3:49675693-49678935	0	+	49675693	49675961	789624	8	94,76,138,92,41,122,61,84,	0,197,684,915,1083,1209,1879,3158,
#Deleted in new
chr3	49676669	49680280	chr3:49676669-49680280	0	+	49676669	49676669	8553170	6	31,41,122,61,98,688,	0,107,233,903,2182,2923,
#Deleted in new
chr3	49678910	49682945	chr3:49678910-49682945	0	+	49678910	49681101	789624	9	39,24,80,139,84,81,89,191,103,	0,682,1639,2190,2811,2976,3437,3635,3932,
#Deleted in new
chr3	49682600	49683503	chr3:49682600-49683503	0	+	49682600	49682600	8553170	3	136,103,464,	0,242,439,
#Deleted in new
chr3	49683946	49685090	chr3:49683946-49685090	0	-	49684027	49685090	789624	5	243,140,107,98,79,	0,367,603,791,1065,
#Deleted in new
chr3	49683946	49689053	chr3:49683946-49689053	3	-	49684027	49688691	789624	18	243,140,107,147,78,121,36,137,103,131,169,119,121,137,115,113,148,456,	0,367,603,791,1065,1315,1524,1649,1913,2115,2366,2737,3000,3202,3417,3609,3803,4651,
#Deleted in new
chr3	49683975	49686852	chr3:49683975-49686852	0	-	49683975	49683975	8553170	6	214,140,107,769,886,169,	0,338,574,762,1620,2708,
#Deleted in new
chr3	49683975	49689493	chr3:49683975-49689493	0	-	49683975	49683975	8553170	13	214,140,107,147,74,121,36,886,119,121,330,113,1744,	0,338,574,762,1036,1286,1495,1620,2708,2971,3173,3580,3774,
#Deleted in new
chr3	49683975	49686960	chr3:49683975-49686960	0	-	49683975	49683975	8553170	9	214,140,107,147,78,121,36,886,277,	0,338,574,762,1036,1286,1495,1620,2708,
#Deleted in new
chr3	49684048	49685399	chr3:49684048-49685399	0	-	49684048	49684048	8553170	5	141,140,107,147,388,	0,265,501,689,963,
#Deleted in new
chr3	49684324	49685298	chr3:49684324-49685298	0	-	49684324	49684324	8553170	2	129,749,	0,225,
#Deleted in new
chr3	49684479	49684983	chr3:49684479-49684983	3	-	49684479	49684479	8553170	2	177,246,	0,258,
#Deleted in new
chr3	49684737	49685785	chr3:49684737-49685785	0	-	49684737	49684737	8553170	4	218,121,36,190,	0,524,733,858,
#Deleted in new
chr3	49684737	49687462	chr3:49684737-49687462	0	-	49684737	49684737	8553170	11	147,78,121,36,137,103,420,119,121,137,99,	0,274,524,733,858,1122,1324,1946,2209,2411,2626,
#Deleted in new
chr3	49684843	49685874	chr3:49684843-49685874	0	-	49684843	49684843	8553170	3	539,36,279,	0,627,752,
#Deleted in new
chr3	49684860	49686866	chr3:49684860-49686866	0	-	49684860	49684860	8553170	2	646,1271,	0,735,
#Deleted in new
chr3	49685406	49686270	chr3:49685406-49686270	0	-	49685406	49685406	8553170	3	100,137,411,	0,189,453,
#Deleted in new
chr3	49685481	49686857	chr3:49685481-49686857	0	-	49685481	49685481	8553170	5	25,137,103,420,174,	0,114,378,580,1202,
#Deleted in new
chr3	49685682	49686187	chr3:49685682-49686187	0	-	49685682	49685682	8553170	2	280,126,	0,379,
#Deleted in new
chr3	49685744	49686803	chr3:49685744-49686803	0	-	49685744	49685744	8553170	3	448,169,120,	0,568,939,
#Deleted in new
chr3	49685884	49688673	chr3:49685884-49688673	0	-	49685884	49685884	8553170	7	597,119,117,137,113,148,76,	0,799,1066,1264,1671,1865,2713,
#Deleted in new
chr3	49686167	49688673	chr3:49686167-49688673	0	-	49686167	49686167	8553170	5	900,137,113,148,76,	0,981,1388,1582,2430,
#Deleted in new
chr3	49686741	49688671	chr3:49686741-49688671	0	-	49686741	49686741	8553170	6	61,121,137,115,113,74,	0,205,407,622,814,1856,
#Deleted in new
chr3	49686967	49688658	chr3:49686967-49688658	0	-	49686967	49686967	8553170	4	100,520,148,61,	0,181,782,1630,
#Deleted in new
chr3	49687039	49688068	chr3:49687039-49688068	0	-	49687039	49687039	8553170	4	28,137,113,319,	0,109,516,710,
#Deleted in new
chr3	49687812	49689501	chr3:49687812-49689501	0	-	49687812	49687812	8553170	2	85,457,	0,1232,
#Partially deleted in new
chr3	49689498	49721527	chr3:49689498-49721527	3	+	49691165	49721305	0	39	108,118,85,80,95,55,86,87,68,126,115,105,126,93,74,118,100,62,72,121,102,107,199,146,84,108,178,75,88,88,85,140,189,76,85,143,95,86,343,	0,1631,1926,7644,7864,8386,8553,8941,9256,9481,9969,10169,10728,10973,11137,11992,12312,12584,12835,13134,13928,15151,15485,16035,16483,17292,22980,24014,24239,24411,24591,26076,26323,26603,26894,31012,31301,31521,31686,
#Partially deleted in new
chr3	49689537	49712830	chr3:49689537-49712830	1	+	49698092	49712709	789624	24	69,95,55,86,87,68,126,115,105,126,93,74,118,100,62,72,121,102,107,199,146,84,108,352,	0,7825,8347,8514,8902,9217,9442,9930,10130,10689,10934,11098,11953,12273,12545,12796,13095,13889,15112,15446,15996,16444,17253,22941,
#Partially deleted in new
chr3	49689543	49721527	chr3:49689543-49721527	0	+	49691165	49705537	789624	39	63,118,85,80,95,55,86,87,68,126,115,105,126,93,74,118,100,62,72,121,102,107,203,146,84,108,414,75,88,88,85,140,189,76,85,143,95,86,343,	0,1586,1881,7599,7819,8341,8508,8896,9211,9436,9924,10124,10683,10928,11092,11947,12267,12539,12790,13089,13883,15106,15440,15990,16438,17247,22935,23969,24194,24366,24546,26031,26278,26558,26849,30967,31256,31476,31641,
#Partially deleted in new
chr3	49689556	49697412	chr3:49689556-49697412	0	+	49691165	49697084	789624	5	50,118,85,178,50,	0,1573,1868,7488,7806,
#Partially deleted in new
chr3	49689556	49697204	chr3:49689556-49697204	0	+	49691165	49697204	789624	4	266,118,85,62,	0,1573,1868,7586,
#Partially deleted in new
chr3	49689561	49721529	chr3:49689561-49721529	0	+	49689561	49689561	8553170	38	45,118,85,80,95,55,86,87,68,126,115,105,126,93,74,118,100,62,72,121,102,537,146,84,108,178,75,88,88,85,223,189,76,85,143,95,86,345,	0,1568,1863,7581,7801,8323,8490,8878,9193,9418,9906,10106,10665,10910,11074,11929,12249,12521,12772,13071,13865,15088,15972,16420,17229,22917,23951,24176,24348,24528,25930,26260,26540,26831,30949,31238,31458,31623,
#Partially deleted in new
chr3	49689564	49721527	chr3:49689564-49721527	0	+	49689564	49689564	8553170	35	42,118,85,80,95,55,86,87,68,126,115,897,74,118,100,62,72,121,102,107,105,532,108,1109,88,88,85,140,189,76,85,143,95,86,343,	0,1565,1860,7578,7798,8320,8487,8875,9190,9415,9903,10103,11071,11926,12246,12518,12769,13068,13862,15085,15517,15969,17226,22914,24173,24345,24525,26010,26257,26537,26828,30946,31235,31455,31620,
#Partially deleted in new
chr3	49691165	49697084	chr3:49691165-49697084	1	+	49691165	49697084	789624	3	82,85,40,	0,259,5879,
#Deleted in new
chr3	49700499	49702110	chr3:49700499-49702110	0	+	49700499	49700499	8553170	4	65,74,118,300,	0,136,991,1311,
#Deleted in new
chr3	49712549	49716043	chr3:49712549-49716043	0	+	49712549	49712549	8553170	6	107,75,260,85,140,222,	0,963,1188,1540,3025,3272,
#Partially deleted in new
chr3	49712829	49721526	chr3:49712829-49721526	1	+	49712882	49721305	789624	13	63,75,88,88,85,140,189,76,85,143,95,86,342,	0,683,908,1080,1260,2745,2992,3272,3563,7681,7970,8190,8355,
#Deleted in new
chr3	49713526	49715889	chr3:49713526-49715889	0	+	49713526	49713926	789624	5	61,88,85,140,68,	0,383,563,2048,2295,
#Deleted in new
chr3	49716833	49719695	chr3:49716833-49719695	3	-	49717950	49719465	789624	1	2862,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	49716843	49723951	chr3:49716843-49723951	3	-	49721751	49723726	789624	10	5040,183,128,79,159,143,49,81,134,112,	0,5121,5387,5588,5752,6128,6410,6548,6754,6996,
#Partially deleted in new
chr3	49718103	49720890	chr3:49718103-49720890	0	+	49718103	49718103	8553170	4	159,213,143,91,	0,288,2407,2696,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	49719923	49723951	chr3:49719923-49723951	1	-	49721751	49723726	789624	8	2224,128,79,159,143,49,81,354,	0,2307,2508,2672,3048,3330,3468,3674,
#Deleted in new
chr3	49720558	49721529	chr3:49720558-49721529	0	+	49720558	49720558	8553170	3	95,306,345,	0,241,626,
#Deleted in new
chr3	49721475	49723949	chr3:49721475-49723949	1	-	49721751	49723726	789624	9	408,183,128,79,159,143,49,81,352,	0,489,755,956,1120,1496,1778,1916,2122,
#Deleted in new
chr3	49722731	49723943	chr3:49722731-49723943	0	-	49722731	49722731	8553170	3	383,215,346,	0,522,866,
#Deleted in new
chr3	49722991	49723916	chr3:49722991-49723916	0	-	49722991	49722991	8553170	3	311,81,319,	0,400,606,
#Partially deleted in new
chr3	49724293	49786527	chr3:49724293-49786527	3	-	49727121	49748040	789624	6	3362,176,182,211,351,174,	0,3809,8497,13918,23524,62060,
#Partially deleted in new
chr3	49724294	49786540	chr3:49724294-49786540	1	-	49727121	49732911	789624	5	3361,176,182,211,187,	0,3808,8496,13917,62059,
#Partially deleted in new
chr3	49724294	49786194	chr3:49724294-49786194	1	-	49727121	49748040	789624	6	3361,176,182,211,351,525,	0,3808,8496,13917,23523,61375,
#Partially deleted in new
chr3	49726912	49786540	chr3:49726912-49786540	1	-	49727587	49748040	789624	6	708,176,182,211,351,187,	0,1190,5878,11299,20905,59441,
#Partially deleted in new
chr3	49727027	49786542	chr3:49727027-49786542	1	-	49727121	49732911	789624	5	628,176,182,211,63,	0,1075,5763,11184,59452,
#Deleted in new
chr3	49727408	49728396	chr3:49727408-49728396	0	-	49727408	49727408	8553170	2	247,294,	0,694,
#Partially deleted in new
chr3	49748011	49786199	chr3:49748011-49786199	0	-	49748011	49748011	8553170	2	157,530,	0,37658,
#Partially deleted in new
chr3	49758482	49758656	chr3:49758482-49758656	7	+	49758482	49758482	16724991	1	174,	0,
#Partially deleted in new
chr3	49775284	49775614	chr3:49775284-49775614	7	+	49775284	49775284	16724991	1	330,	0,
#Partially deleted in new
chr3	49790731	49799821	chr3:49790731-49799821	3	-	49790831	49799812	789624	19	156,28,88,57,143,221,151,140,204,94,154,184,137,104,111,92,163,191,58,	0,709,982,1171,1736,2122,2429,2851,3071,3876,4215,4464,4896,5211,6190,8094,8262,8515,9032,
#Deleted in new
chr3	49790731	49793272	chr3:49790731-49793272	0	-	49791786	49793272	789624	6	156,31,88,57,221,112,	0,709,982,1171,2122,2429,
#Deleted in new
chr3	49790731	49792931	chr3:49790731-49792931	0	-	49790731	49790731	8553170	4	156,88,57,78,	0,982,1171,2122,
#Deleted in new
chr3	49790731	49792932	chr3:49790731-49792932	0	-	49790831	49792932	789624	6	156,31,88,57,143,79,	0,709,982,1171,1736,2122,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	49798231	49799835	chr3:49798231-49799835	1	-	49798796	49799812	789624	3	925,191,72,	0,1015,1532,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	49798326	49799835	chr3:49798326-49799835	1	-	49798765	49799812	789624	4	591,163,191,72,	0,667,920,1437,
#Deleted in new
chr3	49803253	49805030	chr3:49803253-49805030	3	+	49803386	49804987	789624	2	190,850,	0,927,
#Deleted in new
chr3	49805206	49813946	chr3:49805206-49813946	3	-	49805307	49813787	789624	24	231,101,93,192,93,83,184,75,184,65,206,166,156,81,108,183,147,98,136,91,107,135,169,215,	0,690,866,2529,2813,3179,3769,4183,4335,4608,4771,5056,5310,5545,5777,6066,6663,6902,7201,7441,7855,8042,8272,8525,
#Deleted in new
chr3	49805223	49806290	chr3:49805223-49806290	0	-	49805223	49805223	8553170	2	214,394,	0,673,
#Deleted in new
chr3	49806136	49806245	chr3:49806136-49806245	3	-	49806136	49806136	5263520	1	109,	0,
#Deleted in new
chr3	49808041	49809705	chr3:49808041-49809705	0	-	49808041	49808041	8553170	4	71,83,184,316,	0,344,934,1348,
#Deleted in new
chr3	49809007	49810047	chr3:49809007-49810047	0	-	49809007	49809007	8553170	3	718,65,70,	0,807,970,
#Deleted in new
chr3	49809183	49809887	chr3:49809183-49809887	0	-	49809183	49809183	8553170	2	542,73,	0,631,
#Deleted in new
chr3	49809574	49810350	chr3:49809574-49810350	0	-	49809574	49809574	8553170	3	151,65,373,	0,240,403,
#Deleted in new
chr3	49809978	49810564	chr3:49809978-49810564	0	-	49809978	49809978	8553170	2	450,48,	0,538,
#Deleted in new
chr3	49810459	49811455	chr3:49810459-49811455	0	-	49810459	49810459	8553170	4	213,81,108,183,	0,292,524,813,
#Deleted in new
chr3	49810525	49811792	chr3:49810525-49811792	0	-	49810525	49810525	8553170	3	147,81,809,	0,226,458,
#Deleted in new
chr3	49811369	49812471	chr3:49811369-49812471	0	-	49811369	49811369	8553170	3	647,98,64,	0,739,1038,
#Deleted in new
chr3	49812447	49813932	chr3:49812447-49813932	0	-	49812447	49812447	8553170	5	96,107,135,169,201,	0,614,801,1031,1284,
#Partially deleted in new
chr3	49828598	49856567	chr3:49828598-49856567	3	-	49829102	49856453	0	15	627,51,150,49,153,89,90,88,114,95,128,40,84,58,212,	0,859,1018,1421,3317,11173,11685,12386,13227,13854,15202,15942,18926,19544,27757,
#Deleted in new
chr3	49828620	49829774	chr3:49828620-49829774	0	-	49828620	49828620	8553170	2	888,158,	0,996,
#Partially deleted in new
chr3	49829087	49856549	chr3:49829087-49856549	0	-	49840353	49856453	789624	10	138,51,150,49,140,90,40,84,58,194,	0,370,529,932,10633,11196,15453,18437,19055,27268,
#Partially deleted in new
chr3	49829255	49856574	chr3:49829255-49856574	1	-	49829424	49856453	789624	9	253,150,49,153,89,90,84,58,219,	0,361,764,2660,10516,11028,18269,18887,27100,
#Partially deleted in new
chr3	49831915	49840552	chr3:49831915-49840552	0	-	49831915	49831915	8553170	3	153,89,269,	0,7856,8368,
#Partially deleted in new
chr3	49839808	49856474	chr3:49839808-49856474	0	-	49839808	49856453	789624	10	52,90,88,114,95,128,40,36,58,119,	0,475,1176,2017,2644,3992,4732,7716,8334,16547,
#Partially deleted in new
chr3	49842485	49844587	chr3:49842485-49844587	0	-	49842485	49842485	8553170	3	62,217,47,	0,1315,2055,
#Partially deleted in new
chr3	49842495	49856564	chr3:49842495-49856564	0	-	49842495	49856453	789624	6	52,128,40,84,64,209,	0,1305,2045,5029,5641,13860,
#Partially deleted in new
chr3	49843144	49856564	chr3:49843144-49856564	0	-	49843144	49843144	8553170	5	784,40,84,58,209,	0,1396,4380,4998,13211,
#Partially deleted in new
chr3	49843715	49856559	chr3:49843715-49856559	0	-	49843715	49843715	8553170	5	213,40,36,58,204,	0,825,3809,4427,12640,
#Partially deleted in new
chr3	49843850	49856559	chr3:49843850-49856559	0	-	49843850	49843850	8553170	5	167,40,84,58,204,	0,690,3674,4292,12505,
#Partially deleted in new
chr3	49857987	49869903	chr3:49857987-49869903	0	-	49857987	49857987	8553170	10	1894,88,79,137,358,139,75,132,109,146,	0,2183,2483,2728,2955,3451,3803,4057,4306,11770,
#Partially deleted in new
chr3	49857988	49869905	chr3:49857988-49869905	1	-	49859317	49862388	789624	10	1893,88,79,129,121,139,75,132,109,148,	0,2182,2482,2727,3191,3450,3802,4056,4305,11769,
#Partially deleted in new
chr3	49857988	49869931	chr3:49857988-49869931	1	-	49859313	49862388	789624	11	1688,88,79,137,76,121,139,75,132,109,174,	0,2182,2482,2727,2954,3191,3450,3802,4056,4305,11769,
#Partially deleted in new
chr3	49857988	49870222	chr3:49857988-49870222	3	-	49859317	49862388	789624	11	1893,88,79,137,76,121,139,75,132,109,465,	0,2182,2482,2727,2954,3191,3450,3802,4056,4305,11769,
#Partially deleted in new
chr3	49857988	49869906	chr3:49857988-49869906	1	-	49859317	49862388	789624	12	1688,112,88,79,137,76,121,139,75,132,109,149,	0,1781,2182,2482,2727,2954,3191,3450,3802,4056,4305,11769,
#Deleted in new
chr3	49859254	49862388	chr3:49859254-49862388	1	-	49859317	49862388	789624	9	627,88,79,129,121,139,75,132,95,	0,916,1216,1461,1925,2184,2536,2790,3039,
#Partially deleted in new
chr3	49859260	49869906	chr3:49859260-49869906	1	-	49859317	49862046	789624	11	621,88,79,137,76,121,139,75,132,71,149,	0,910,1210,1455,1682,1919,2178,2530,2784,3071,10497,
#Partially deleted in new
chr3	49859260	49869903	chr3:49859260-49869903	0	-	49861553	49862388	789624	12	416,112,88,79,137,76,121,139,75,91,109,146,	0,509,910,1210,1455,1682,1919,2178,2530,2825,3033,10497,
#Partially deleted in new
chr3	49859292	49869909	chr3:49859292-49869909	1	-	49859317	49862388	789624	12	384,112,88,79,137,76,121,10,75,132,109,152,	0,477,878,1178,1423,1650,1887,2146,2498,2752,3001,10465,
#Deleted in new
chr3	49859768	49861024	chr3:49859768-49861024	0	-	49859768	49859768	8553170	4	113,88,79,309,	0,402,702,947,
#Partially deleted in new
chr3	49860199	49869905	chr3:49860199-49869905	0	-	49861269	49862388	789624	10	59,79,137,76,121,99,75,132,109,148,	0,271,516,743,980,1239,1591,1845,2094,9558,
#Deleted in new
chr3	49860493	49862406	chr3:49860493-49862406	0	-	49860493	49860493	8553170	7	56,137,76,121,427,132,113,	0,222,449,686,945,1551,1800,
#Partially deleted in new
chr3	49860942	49869935	chr3:49860942-49869935	0	-	49860942	49862388	789624	5	76,113,123,71,178,	0,245,496,1389,8815,
#Deleted in new
chr3	49860958	49862406	chr3:49860958-49862406	0	-	49860958	49860958	8553170	4	342,427,132,113,	0,480,1086,1335,
#Partially deleted in new
chr3	49861129	49869905	chr3:49861129-49869905	0	-	49861129	49861129	8553170	4	171,123,71,148,	0,309,1202,8628,
#Partially deleted in new
chr3	49861463	49869905	chr3:49861463-49869905	0	-	49861463	49861463	8553170	5	114,75,132,129,148,	0,327,581,810,8294,
#Partially deleted in new
chr3	49861788	49869905	chr3:49861788-49869905	0	-	49861788	49861788	8553170	3	77,358,148,	0,256,7969,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	49863374	49863660	chr3:49863374-49863660	3	-	49863374	49863374	8553170	1	286,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	49873346	49877305	chr3:49873346-49877305	7	-	49873346	49873346	16724991	1	3959,	0,
#Partially deleted in new
chr3	49887001	49903637	chr3:49887001-49903637	3	-	49887306	49903609	0	20	561,137,166,110,182,81,207,102,166,147,210,94,162,137,166,161,171,129,189,1258,	0,2922,3483,4195,4397,4756,8165,8445,8713,8959,9193,9538,9727,10278,10518,11049,11516,11865,12073,15378,
#Partially deleted in new
chr3	49887004	49903866	chr3:49887004-49903866	0	-	49895259	49903609	789624	19	558,137,166,110,182,81,230,166,147,210,94,162,137,166,161,171,129,189,1487,	0,2919,3480,4192,4394,4753,8162,8710,8956,9190,9535,9724,10275,10515,11046,11513,11862,12070,15375,
#Partially deleted in new
chr3	49887006	49903609	chr3:49887006-49903609	1	-	49887306	49903609	789624	6	556,137,166,110,51,45,	0,2917,3478,4190,4392,16558,
#Partially deleted in new
chr3	49887006	49903609	chr3:49887006-49903609	1	-	49887306	49903609	789624	8	556,110,182,81,207,102,76,711,	0,4190,4392,4751,8160,8440,8708,15892,
#Partially deleted in new
chr3	49887006	49903873	chr3:49887006-49903873	1	-	49887306	49903609	0	18	556,137,166,110,182,81,207,102,166,147,210,94,162,137,166,161,171,1494,	0,2917,3478,4190,4392,4751,8160,8440,8708,8954,9188,9533,9722,10273,10513,11044,11511,15373,
#Partially deleted in new
chr3	49887164	49903609	chr3:49887164-49903609	1	-	49887306	49903609	0	19	398,137,166,110,182,81,207,102,166,210,94,162,137,166,161,171,129,189,1230,	0,2759,3320,4032,4234,4593,8002,8282,8550,9030,9375,9564,10115,10355,10886,11353,11702,11910,15215,
#Partially deleted in new
chr3	49889949	49895816	chr3:49889949-49895816	0	-	49889949	49895816	789624	7	111,166,110,182,81,102,102,	0,535,1247,1449,1808,5497,5765,
#Partially deleted in new
chr3	49890546	49896073	chr3:49890546-49896073	0	-	49890546	49896073	789624	7	104,110,182,81,207,13,113,	0,650,852,1211,4620,5321,5414,
#Partially deleted in new
chr3	49890569	49891942	chr3:49890569-49891942	0	-	49890569	49890569	8553170	4	81,110,182,185,	0,627,829,1188,
#Partially deleted in new
chr3	49891770	49895439	chr3:49891770-49895439	0	-	49891770	49891770	8553170	2	68,273,	0,3396,
#Deleted in new
chr3	49895430	49896138	chr3:49895430-49896138	0	-	49895430	49895430	8553170	2	118,424,	0,284,
#Partially deleted in new
chr3	49896119	49903609	chr3:49896119-49903609	0	-	49896119	49896119	8553170	10	288,94,162,137,166,161,171,129,189,1230,	0,420,609,1160,1400,1931,2398,2747,2955,6260,
#Partially deleted in new
chr3	49897986	49903609	chr3:49897986-49903609	0	-	49897986	49897986	8553170	5	225,171,129,189,1230,	0,531,880,1088,4393,
#Partially deleted in new
chr3	49897986	49903609	chr3:49897986-49903609	0	-	49897986	49897986	8553170	3	225,171,1230,	0,531,4393,
#Partially deleted in new
chr3	49899005	49903609	chr3:49899005-49903609	0	-	49899005	49899005	8553170	2	258,1230,	0,3374,
#Partially deleted in new
chr3	49899301	49903757	chr3:49899301-49903757	3	+	49899301	49899301	8553170	2	217,327,	0,4129,
#Partially deleted in new
chr3	49903844	49906237	chr3:49903844-49906237	1	+	49903844	49903844	8553170	2	246,176,	0,2217,
#Partially deleted in new
chr3	49903881	49906240	chr3:49903881-49906240	0	+	49903881	49903881	8553170	2	209,156,	0,2203,
#Partially deleted in new
chr3	49903986	49916937	chr3:49903986-49916937	3	+	49903986	49903986	8553170	2	104,496,	0,12455,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	49907159	49929541	chr3:49907159-49929541	3	-	49909013	49913346	789624	6	1995,148,766,486,140,173,	0,2093,2959,4366,6060,22209,
#Partially deleted in new
chr3	49908861	49930145	chr3:49908861-49930145	1	-	49909013	49929886	789624	6	293,148,766,486,140,537,	0,391,1257,2664,4358,20747,
#Partially deleted in new
chr3	49908872	49929889	chr3:49908872-49929889	1	-	49909013	49929886	789624	5	282,148,766,140,281,	0,380,1246,4347,20736,
#Partially deleted in new
chr3	49908874	49929889	chr3:49908874-49929889	0	-	49908874	49908874	8553170	3	2010,140,281,	0,4345,20734,
#Partially deleted in new
chr3	49911620	49929834	chr3:49911620-49929834	0	-	49911620	49911620	8553170	4	391,140,118,226,	0,1599,4252,17988,
#Partially deleted in new
chr3	49911765	49929605	chr3:49911765-49929605	0	-	49911765	49911765	8553170	3	246,140,176,	0,1454,17664,
#Partially deleted in new
chr3	49912396	49929887	chr3:49912396-49929887	0	-	49912396	49912396	8553170	2	963,279,	0,17212,
#Partially deleted in new
chr3	49940006	50077249	chr3:49940006-50077249	1	+	50048253	50077133	789624	17	219,110,75,61,276,161,98,43,82,86,147,96,261,75,98,130,242,	0,22569,108238,114328,117721,118395,119642,120949,121133,121455,121955,125024,126235,128683,130448,135194,137001,
#Partially deleted in new
chr3	49940032	50077252	chr3:49940032-50077252	3	+	49962641	50077133	789624	21	193,110,1279,90,70,74,75,61,276,161,98,43,82,86,147,96,261,75,98,130,245,	0,22543,27437,32026,35290,59407,108212,114302,117695,118369,119616,120923,121107,121429,121929,124998,126209,128657,130422,135168,136975,
#Partially deleted in new
chr3	49940040	50077248	chr3:49940040-50077248	1	+	49967821	50077133	789624	21	185,110,1551,90,70,74,75,61,276,161,98,43,82,86,147,96,261,75,98,130,241,	0,22535,27157,32018,35282,59399,108204,114294,117687,118361,119608,120915,121099,121421,121921,124990,126201,128649,130414,135160,136967,
#Partially deleted in new
chr3	49940062	50077248	chr3:49940062-50077248	0	+	49962641	50057730	789624	16	163,110,61,276,161,98,43,82,86,147,96,261,75,98,130,241,	0,22513,114272,117665,118339,119586,120893,121077,121399,121899,124968,126179,128627,130392,135138,136945,
#Partially deleted in new
chr3	49940073	50066442	chr3:49940073-50066442	0	+	49940073	49940073	8553170	17	152,110,90,70,74,75,61,276,161,98,43,82,86,147,96,54,201,	0,22502,31985,35249,59366,108171,114261,117654,118328,119575,120882,121066,121388,121888,124957,125505,126168,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	49940096	49963027	chr3:49940096-49963027	0	+	49940096	49940096	8553170	2	129,452,	0,22479,
#Partially deleted in new
chr3	49940101	50077248	chr3:49940101-50077248	1	+	50048253	50077133	789624	19	124,110,90,70,75,61,276,161,98,43,82,86,147,96,261,75,98,130,241,	0,22474,31957,35221,108143,114233,117626,118300,119547,120854,121038,121360,121860,124929,126140,128588,130353,135099,136906,
#Partially deleted in new
chr3	49940139	50077247	chr3:49940139-50077247	0	+	49967821	50061598	789624	20	86,110,1551,90,70,74,75,61,276,161,98,43,82,647,96,261,75,98,130,240,	0,22436,27058,31919,35183,59300,108105,114195,117588,118262,119509,120816,121000,121322,124891,126102,128550,130315,135061,136868,
#Partially deleted in new
chr3	49940150	50057853	chr3:49940150-50057853	0	+	49962641	50054339	789624	8	75,110,1279,90,70,75,61,126,	0,22425,27319,31908,35172,108094,114184,117577,
#Partially deleted in new
chr3	49940185	50100045	chr3:49940185-50100045	0	+	50048253	50059667	789624	21	40,110,90,70,75,61,276,161,115,43,82,86,147,96,261,75,98,70,166,156,64,	0,22390,31873,35137,108059,114149,117542,118216,119446,120770,120954,121276,121776,124845,126056,128504,130269,150196,151857,153534,159796,
#Partially deleted in new
chr3	49940460	49967654	chr3:49940460-49967654	0	+	49962641	49967654	789624	3	287,110,185,	0,22115,27009,
#Partially deleted in new
chr3	49940538	49967358	chr3:49940538-49967358	0	+	49940538	49940538	8553170	3	209,110,161,	0,22037,26659,
#Partially deleted in new
chr3	49940684	49967365	chr3:49940684-49967365	0	+	49940684	49940684	8553170	3	397,110,168,	0,21891,26513,
#Partially deleted in new
chr3	49981560	50057806	chr3:49981560-50057806	0	+	49981560	49981560	8553170	5	108,74,75,61,79,	0,17879,66684,72774,76167,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	49999451	50058915	chr3:49999451-50058915	0	+	49999451	49999451	8553170	5	62,75,61,276,514,	0,48793,54883,58276,58950,
#Partially deleted in new
chr3	50047108	50058466	chr3:50047108-50058466	0	+	50048253	50058466	789624	5	218,75,61,276,65,	0,1136,7226,10619,11293,
#Partially deleted in new
chr3	50054015	50057847	chr3:50054015-50057847	0	+	50054015	50054015	8553170	2	380,120,	0,3712,
#Partially deleted in new
chr3	50059342	50061172	chr3:50059342-50061172	0	+	50059342	50059342	8553170	3	404,43,33,	0,1613,1797,
#Partially deleted in new
chr3	50059697	50065061	chr3:50059697-50065061	0	+	50060983	50065061	789624	7	49,35,43,82,86,147,31,	0,1103,1258,1442,1764,2264,5333,
#Partially deleted in new
chr3	50066391	50077249	chr3:50066391-50077249	1	+	50070476	50077133	789624	5	111,75,98,158,242,	0,2298,4063,8781,10616,
#Partially deleted in new
chr3	50088907	50119021	chr3:50088907-50119021	3	+	50090434	50118456	0	25	122,70,166,156,70,74,84,61,66,161,98,88,78,73,86,85,92,162,150,72,180,75,98,130,691,	0,1474,3135,4812,11074,11624,14175,15340,16169,16641,17859,18574,19162,19324,20695,21471,21771,24475,25042,25272,26520,26998,28166,28342,29423,
#Partially deleted in new
chr3	50088918	50103107	chr3:50088918-50103107	0	+	50090434	50103107	789624	7	111,70,166,64,70,74,25,	0,1463,3124,4801,11063,11613,14164,
#Partially deleted in new
chr3	50088918	50102194	chr3:50088918-50102194	1	+	50090434	50100074	0	5	111,70,166,156,2213,	0,1463,3124,4801,11063,
#Partially deleted in new
chr3	50088953	50100172	chr3:50088953-50100172	0	+	50088953	50088953	8553170	5	76,70,166,64,191,	0,1428,3089,4766,11028,
#Partially deleted in new
chr3	50088953	50100054	chr3:50088953-50100054	0	+	50090434	50100054	789624	5	104,70,166,156,73,	0,1428,3089,4766,11028,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	50088954	50100010	chr3:50088954-50100010	0	+	50090434	50093041	789624	6	75,70,166,64,156,29,	0,1427,3088,4024,4765,11027,
#Partially deleted in new
chr3	50088962	50118957	chr3:50088962-50118957	0	+	50088962	50088962	8553170	25	67,70,166,156,70,2635,61,66,161,98,70,88,78,73,86,85,92,162,150,72,180,75,98,130,627,	0,1419,3080,4757,11019,11569,15285,16114,16586,17804,18055,18519,19107,19269,20640,21416,21716,24420,24987,25217,26465,26943,28111,28287,29368,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	50088974	50094330	chr3:50088974-50094330	0	+	50088974	50088974	8553170	4	55,70,166,611,	0,1407,3068,4745,
#Partially deleted in new
chr3	50089880	50093851	chr3:50089880-50093851	0	+	50090434	50093851	789624	4	214,70,166,132,	0,501,2162,3839,
#Partially deleted in new
chr3	50090369	50100004	chr3:50090369-50100004	0	+	50090434	50100004	789624	4	82,166,156,23,	0,1673,3350,9612,
#Partially deleted in new
chr3	50093717	50108305	chr3:50093717-50108305	0	+	50093717	50099994	789624	10	158,70,84,61,66,161,98,88,78,74,	0,6264,9365,10530,11359,11831,13049,13764,14352,14514,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	50099602	50100988	chr3:50099602-50100988	3	-	50099602	50099602	789624	1	1386,	0,
#Partially deleted in new
chr3	50102336	50108255	chr3:50102336-50108255	0	+	50102336	50102336	8553170	8	830,61,66,161,98,88,78,24,	0,1911,2740,3212,4430,5145,5733,5895,
#Partially deleted in new
chr3	50102725	50105614	chr3:50102725-50105614	0	+	50102725	50102725	8553170	3	441,66,66,	0,2351,2823,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	50104576	50106801	chr3:50104576-50106801	0	+	50104576	50104576	8553170	3	566,161,35,	0,972,2190,
#Partially deleted in new
chr3	50104973	50110757	chr3:50104973-50110757	0	+	50104973	50104973	8553170	8	169,161,98,88,78,73,86,79,	0,575,1793,2508,3096,3258,4629,5705,
#Partially deleted in new
chr3	50106739	50109823	chr3:50106739-50109823	0	+	50106739	50106739	8553170	5	125,88,78,73,221,	0,742,1330,1492,2863,
#Partially deleted in new
chr3	50107028	50113489	chr3:50107028-50113489	0	+	50107028	50107028	8553170	7	59,88,78,73,86,92,107,	0,453,1041,1203,2574,3650,6354,
#Partially deleted in new
chr3	50107480	50110892	chr3:50107480-50110892	0	+	50107480	50107480	8553170	6	89,78,73,86,85,214,	0,589,751,2122,2898,3198,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	50112063	50113492	chr3:50112063-50113492	0	+	50112063	50112063	8553170	2	65,369,	0,1060,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	50112613	50115943	chr3:50112613-50115943	0	+	50112613	50112613	8553170	5	931,150,72,180,38,	0,1336,1566,2814,3292,
#Deleted in new
chr3	50113361	50114242	chr3:50113361-50114242	0	+	50113361	50113361	8553170	2	183,293,	0,588,
#Partially deleted in new
chr3	50114028	50117379	chr3:50114028-50117379	0	+	50114028	50114028	8553170	5	71,72,180,75,306,	0,151,1399,1877,3045,
#Partially deleted in new
chr3	50114046	50116180	chr3:50114046-50116180	0	+	50114046	50114046	8553170	4	53,72,180,275,	0,133,1381,1859,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	50114250	50116231	chr3:50114250-50116231	0	+	50114250	50114250	8553170	2	1357,326,	0,1655,
#Partially deleted in new
chr3	50115351	50118570	chr3:50115351-50118570	0	+	50115351	50115351	8553170	4	256,75,306,240,	0,554,1722,2979,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	50116021	50156085	chr3:50116021-50156085	3	-	50116021	50116021	789624	4	2227,64,112,352,	0,6503,20435,39712,
#Deleted in new
chr3	50116544	50117175	chr3:50116544-50117175	0	+	50116544	50116544	8553170	2	173,102,	0,529,
#Partially deleted in new
chr3	50118164	50156020	chr3:50118164-50156020	0	-	50118164	50118164	8553170	2	278,287,	0,37569,
#Partially deleted in new
chr3	50155044	50182766	chr3:50155044-50182766	0	+	50159622	50182766	789624	8	103,152,161,63,120,94,120,123,	0,4538,18748,19007,19186,21723,27239,27599,
#Partially deleted in new
chr3	50155058	50183563	chr3:50155058-50183563	0	+	50159622	50183563	789624	11	506,160,161,63,120,94,120,140,115,70,144,	0,4516,18734,18993,19172,21709,27225,27585,27845,28127,28361,
#Partially deleted in new
chr3	50155090	50189074	chr3:50155090-50189074	1	+	50173884	50188115	789624	18	57,43,161,63,120,94,120,140,115,70,145,223,89,42,158,68,134,1370,	0,4601,18702,18961,19140,21677,27193,27553,27813,28095,28329,29501,30352,30575,30798,31190,31522,32614,
#Partially deleted in new
chr3	50155128	50189075	chr3:50155128-50189075	3	+	50159622	50188115	789624	19	436,160,161,63,120,93,94,120,140,115,70,145,223,89,42,158,68,134,1371,	0,4446,18664,18923,19102,19967,21639,27155,27515,27775,28057,28291,29463,30314,30537,30760,31152,31484,32576,
#Partially deleted in new
chr3	50155410	50173956	chr3:50155410-50173956	0	+	50159622	50173956	789624	3	433,160,164,	0,4164,18382,
#Partially deleted in new
chr3	50159018	50189073	chr3:50159018-50189073	1	+	50159622	50188115	789624	18	270,160,161,63,120,94,120,140,115,70,145,223,89,42,158,68,134,1369,	0,556,14774,15033,15212,17749,23265,23625,23885,24167,24401,25573,26424,26647,26870,27262,27594,28686,
#Partially deleted in new
chr3	50173806	50176861	chr3:50173806-50176861	0	+	50173806	50176861	789624	4	147,63,138,94,	0,245,406,2961,
#Deleted in new
chr3	50182637	50183608	chr3:50182637-50183608	0	+	50182637	50182637	8553170	4	146,115,70,189,	0,266,548,782,
#Deleted in new
chr3	50184271	50185465	chr3:50184271-50185465	0	+	50184271	50184271	8553170	2	543,23,	0,1171,
#Deleted in new
chr3	50191611	50196516	chr3:50191611-50196516	3	+	50191725	50194955	0	9	220,43,142,158,129,130,154,192,1249,	0,1521,1653,1894,2141,2480,2889,3153,3656,
#Deleted in new
chr3	50191669	50196515	chr3:50191669-50196515	1	+	50191725	50194955	0	9	162,43,142,158,129,130,154,192,114,	0,1463,1595,1836,2083,2422,2831,3095,4732,
#Deleted in new
chr3	50192671	50193837	chr3:50192671-50193837	0	+	50193170	50193837	789624	5	51,43,142,158,85,	0,461,593,834,1081,
#Deleted in new
chr3	50192697	50193173	chr3:50192697-50193173	0	+	50192697	50192697	8553170	2	287,41,	0,435,
#Deleted in new
chr3	50193571	50194182	chr3:50193571-50194182	0	+	50193571	50193571	8553170	3	92,129,115,	0,181,496,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	50205245	50214757	chr3:50205245-50214757	0	+	50214199	50214757	789624	5	103,142,152,82,105,	0,2090,8903,9156,9407,
#Partially deleted in new
chr3	50205245	50221486	chr3:50205245-50221486	3	+	50214199	50220177	789624	16	103,152,82,116,74,93,82,83,59,165,80,101,125,145,104,1414,	0,8903,9156,9407,10140,10298,10494,11992,12169,12430,12671,13024,13347,13558,14635,14827,
#Partially deleted in new
chr3	50205267	50217995	chr3:50205267-50217995	0	+	50214199	50215559	789624	10	81,152,82,116,93,82,83,59,165,79,	0,8881,9134,9385,10276,10472,11970,12147,12408,12649,
#Partially deleted in new
chr3	50205278	50214914	chr3:50205278-50214914	0	+	50205278	50205278	8553170	4	70,152,82,262,	0,8870,9123,9374,
#Partially deleted in new
chr3	50205285	50218672	chr3:50205285-50218672	0	+	50215741	50218672	789624	10	63,74,93,82,83,59,165,80,101,80,	0,10100,10258,10454,11952,12129,12390,12631,12984,13307,
#Partially deleted in new
chr3	50207682	50214768	chr3:50207682-50214768	0	+	50214199	50214768	789624	4	285,152,82,116,	0,6466,6719,6970,
#Partially deleted in new
chr3	50215266	50217293	chr3:50215266-50217293	0	+	50215266	50215266	8553170	4	193,93,82,56,	0,277,473,1971,
#Deleted in new
chr3	50217735	50218668	chr3:50217735-50218668	0	+	50217735	50217735	8553170	3	261,101,76,	0,534,857,
#Deleted in new
chr3	50217916	50218680	chr3:50217916-50218680	0	+	50217916	50217916	8553170	2	80,411,	0,353,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	50226291	50258898	chr3:50226291-50258898	1	+	50227123	50257690	789624	9	902,43,142,161,129,130,154,215,531,	0,25808,26105,26732,29900,30431,30645,31208,32076,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	50226736	50258898	chr3:50226736-50258898	0	+	50227123	50253085	789624	10	457,124,43,142,161,129,130,154,215,531,	0,24883,25363,25660,26287,29455,29986,30200,30763,31631,
#Deleted in new
chr3	50227435	50227490	chr3:50227435-50227490	3	+	50227435	50227435	5263520	1	55,	0,
#Partially deleted in new
chr3	50229064	50259345	chr3:50229064-50259345	0	+	50229064	50229064	8553170	9	1934,43,142,161,129,130,154,215,978,	0,23035,23332,23959,27127,27658,27872,28435,29303,
#Partially deleted in new
chr3	50230775	50259339	chr3:50230775-50259339	1	+	50252137	50257690	789624	9	223,43,142,161,129,130,154,215,972,	0,21324,21621,22248,25416,25947,26161,26724,27592,
#Partially deleted in new
chr3	50230809	50235290	chr3:50230809-50235290	0	+	50230809	50230809	8553170	2	189,95,	0,4386,
#Partially deleted in new
chr3	50235951	50259355	chr3:50235951-50259355	3	+	50236335	50257690	789624	9	502,43,142,161,129,130,154,215,988,	0,16148,16445,17072,20240,20771,20985,21548,22416,
#Partially deleted in new
chr3	50236203	50259354	chr3:50236203-50259354	0	+	50236335	50256199	789624	8	250,142,161,129,130,154,215,987,	0,16193,16820,19988,20519,20733,21296,22164,
#Partially deleted in new
chr3	50238111	50258751	chr3:50238111-50258751	1	+	50252137	50257690	789624	9	305,43,142,161,129,130,154,215,384,	0,13988,14285,14912,18080,18611,18825,19388,20256,
#Deleted in new
chr3	50239617	50239984	chr3:50239617-50239984	3	+	50239617	50239617	8553170	1	367,	0,
#Partially deleted in new
chr3	50246893	50258697	chr3:50246893-50258697	1	+	50247068	50257690	789624	9	182,43,142,161,129,130,154,215,330,	0,5206,5503,6130,9298,9829,10043,10606,11474,
#Partially deleted in new
chr3	50251408	50258893	chr3:50251408-50258893	0	+	50251408	50251408	8553170	7	1130,161,129,130,154,215,526,	0,1615,4783,5314,5528,6091,6959,
#Partially deleted in new
chr3	50253153	50256691	chr3:50253153-50256691	0	+	50253153	50253153	8553170	2	31,500,	0,3038,
#Deleted in new
chr3	50256282	50258166	chr3:50256282-50258166	0	+	50256282	50256282	8553170	4	38,130,154,667,	0,440,654,1217,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	50260302	50263358	chr3:50260302-50263358	3	+	50260302	50260302	8553170	2	2233,392,	0,2664,
#Deleted in new
chr3	50260413	50261407	chr3:50260413-50261407	0	+	50260413	50260413	8553170	2	150,275,	0,719,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	50261232	50263312	chr3:50261232-50263312	0	+	50261232	50261232	8553170	2	84,346,	0,1734,
#Deleted in new
chr3	50266640	50267371	chr3:50266640-50267371	3	-	50266640	50266640	789624	2	247,91,	0,640,
#Deleted in new
chr3	50267557	50271458	chr3:50267557-50271458	0	+	50269240	50271458	789624	7	212,189,158,63,120,94,98,	0,1603,2569,2875,3332,3530,3803,
#Partially deleted in new
chr3	50267607	50277139	chr3:50267607-50277139	3	+	50269240	50276706	789624	18	162,189,158,63,120,94,120,146,112,70,145,220,92,42,158,56,140,838,	0,1553,2519,2825,3282,3480,3753,5690,5927,6151,6305,6755,7235,7404,7694,7952,8097,8694,
#Partially deleted in new
chr3	50268873	50277139	chr3:50268873-50277139	0	+	50268873	50268873	8553170	16	476,158,63,120,90,120,146,294,145,220,92,42,158,56,140,838,	0,1253,1559,2016,2214,2487,4424,4661,5039,5489,5969,6138,6428,6686,6831,7428,
#Partially deleted in new
chr3	50269005	50277179	chr3:50269005-50277179	1	+	50269240	50276706	789624	17	344,158,63,120,94,120,146,112,70,145,220,92,42,158,56,140,878,	0,1121,1427,1884,2082,2355,4292,4529,4753,4907,5357,5837,6006,6296,6554,6699,7296,
#Partially deleted in new
chr3	50269164	50273680	chr3:50269164-50273680	0	+	50269164	50269164	8553170	7	185,250,120,94,120,146,146,	0,962,1725,1923,2196,4133,4370,
#Partially deleted in new
chr3	50269168	50277142	chr3:50269168-50277142	1	+	50269240	50276706	789624	17	181,158,63,120,94,120,146,112,70,142,220,92,42,158,56,140,841,	0,958,1264,1721,1919,2192,4129,4366,4590,4747,5194,5674,5843,6133,6391,6536,7133,
#Partially deleted in new
chr3	50269213	50276706	chr3:50269213-50276706	1	+	50269240	50276706	789624	17	136,158,63,120,94,120,146,112,85,145,220,92,42,158,56,140,405,	0,913,1219,1676,1874,2147,4084,4321,4530,4699,5149,5629,5798,6088,6346,6491,7088,
#Partially deleted in new
chr3	50270560	50277170	chr3:50270560-50277170	0	+	50270560	50270560	8553170	14	449,94,120,146,112,70,142,220,92,42,158,56,140,869,	0,527,800,2737,2974,3198,3355,3802,4282,4451,4741,4999,5144,5741,
#Deleted in new
chr3	50273118	50277165	chr3:50273118-50277165	1	+	50273949	50276706	789624	11	325,112,70,142,220,92,42,158,56,140,864,	0,416,640,797,1244,1724,1893,2183,2441,2586,3183,
#Deleted in new
chr3	50273129	50274530	chr3:50273129-50274530	0	+	50273129	50273129	8553170	3	314,112,168,	0,405,1233,
#Deleted in new
chr3	50273151	50274340	chr3:50273151-50274340	0	+	50273151	50273151	8553170	3	292,294,425,	0,383,764,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	50273156	50277546	chr3:50273156-50277546	0	+	50273156	50273156	789624	8	158,112,220,92,42,56,140,1245,	0,378,1206,1686,1855,2403,2548,3145,
#Deleted in new
chr3	50273159	50276876	chr3:50273159-50276876	1	+	50273949	50276706	789624	11	155,112,70,145,220,92,42,158,56,140,575,	0,375,599,753,1203,1683,1852,2142,2400,2545,3142,
#Deleted in new
chr3	50273235	50273297	chr3:50273235-50273297	3	+	50273235	50273235	5263520	1	62,	0,
#Deleted in new
chr3	50273345	50277161	chr3:50273345-50277161	0	+	50273345	50273345	8553170	5	483,670,617,56,1457,	0,567,1497,2214,2359,
#Deleted in new
chr3	50274633	50276444	chr3:50274633-50276444	0	+	50274633	50274633	8553170	5	301,448,56,140,143,	0,378,926,1071,1668,
#Partially deleted in new
chr3	50279026	50288114	chr3:50279026-50288114	3	+	50279113	50287202	789624	4	145,114,189,1046,	0,7444,7647,8042,
#Partially deleted in new
chr3	50287731	50292595	chr3:50287731-50292595	1	-	50288190	50292466	789624	12	540,96,129,138,106,182,51,158,125,85,120,379,	0,677,851,1068,1523,1715,1980,2197,2438,2656,2828,4485,
#Deleted in new
chr3	50287742	50288639	chr3:50287742-50288639	0	-	50288190	50288639	789624	3	529,78,57,	0,684,840,
#Partially deleted in new
chr3	50287742	50292918	chr3:50287742-50292918	3	-	50288190	50292274	789624	15	529,96,129,138,106,182,51,158,125,85,120,211,59,260,26,	0,666,840,1057,1512,1704,1969,2186,2427,2645,2817,4474,4739,4845,5150,
#Partially deleted in new
chr3	50287940	50292424	chr3:50287940-50292424	0	-	50287940	50287940	8553170	11	331,96,129,138,106,182,51,366,85,120,208,	0,468,642,859,1314,1506,1771,1988,2447,2619,4276,
#Deleted in new
chr3	50288130	50289601	chr3:50288130-50289601	0	-	50288130	50288130	8553170	5	374,129,138,106,155,	0,452,669,1124,1316,
#Deleted in new
chr3	50288370	50289060	chr3:50288370-50289060	0	-	50288370	50288370	8553170	3	134,129,261,	0,212,429,
#Deleted in new
chr3	50288429	50290251	chr3:50288429-50290251	0	-	50289316	50290251	789624	8	75,129,138,102,182,51,158,82,	0,153,370,825,1017,1282,1499,1740,
#Deleted in new
chr3	50288511	50289226	chr3:50288511-50289226	0	-	50288511	50288511	8553170	2	200,427,	0,288,
#Deleted in new
chr3	50288662	50289263	chr3:50288662-50289263	0	-	50288662	50288662	8553170	2	49,464,	0,137,
#Partially deleted in new
chr3	50288798	50292389	chr3:50288798-50292389	0	-	50290247	50292274	789624	7	139,106,316,158,125,120,173,	0,456,648,1130,1371,1761,3418,
#Deleted in new
chr3	50289207	50290070	chr3:50289207-50290070	0	-	50289207	50289207	8553170	3	153,182,359,	0,239,504,
#Partially deleted in new
chr3	50289247	50292420	chr3:50289247-50292420	0	-	50289247	50289247	8553170	5	113,51,158,510,204,	0,464,681,922,2969,
#Partially deleted in new
chr3	50290005	50292049	chr3:50290005-50292049	0	-	50290005	50290005	8553170	5	81,125,85,120,203,	0,164,382,554,1841,
#Partially deleted in new
chr3	50290008	50292436	chr3:50290008-50292436	0	-	50290008	50290008	8553170	2	671,220,	0,2208,
#Partially deleted in new
chr3	50290180	50292056	chr3:50290180-50292056	0	-	50290180	50290180	8553170	4	114,85,120,287,	0,207,379,1589,
#Partially deleted in new
chr3	50292830	50299468	chr3:50292830-50299468	3	-	50293245	50295602	789624	4	685,90,911,256,	0,801,1878,6382,
#Partially deleted in new
chr3	50292830	50298859	chr3:50292830-50298859	1	-	50293245	50295602	789624	3	685,911,39,	0,1878,5990,
#Partially deleted in new
chr3	50292831	50298831	chr3:50292831-50298831	1	-	50293245	50295602	789624	4	684,90,911,11,	0,800,1877,5989,
#Partially deleted in new
chr3	50292980	50299401	chr3:50292980-50299401	1	-	50293245	50299214	789624	4	535,90,145,189,	0,651,1728,6232,
#Partially deleted in new
chr3	50293044	50299232	chr3:50293044-50299232	1	-	50293245	50295602	789624	3	471,911,20,	0,1664,6168,
#Partially deleted in new
chr3	50293044	50299232	chr3:50293044-50299232	1	-	50293245	50299214	789624	3	471,145,20,	0,1664,6168,
#Deleted in new
chr3	50295123	50295773	chr3:50295123-50295773	0	-	50295123	50295602	789624	2	496,49,	0,601,
#Deleted in new
chr3	50296401	50299416	chr3:50296401-50299416	3	-	50296602	50299214	789624	2	1126,204,	0,2811,
#Deleted in new
chr3	50296403	50298859	chr3:50296403-50298859	1	-	50296602	50297463	789624	2	1124,39,	0,2417,
#Deleted in new
chr3	50296417	50299421	chr3:50296417-50299421	1	-	50296602	50297463	789624	2	1255,209,	0,2795,
#Deleted in new
chr3	50296451	50299400	chr3:50296451-50299400	1	-	50296602	50297463	789624	2	1632,188,	0,2761,
#Deleted in new
chr3	50297204	50299117	chr3:50297204-50299117	0	-	50297204	50297463	789624	2	468,297,	0,1616,
#Deleted in new
chr3	50297292	50298889	chr3:50297292-50298889	0	-	50297292	50297463	789624	2	791,69,	0,1528,
#Deleted in new
chr3	50297435	50298889	chr3:50297435-50298889	0	-	50297435	50297463	789624	3	237,277,69,	0,371,1385,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	50299888	50303620	chr3:50299888-50303620	1	-	50300482	50302956	0	4	912,90,924,155,	0,1099,2168,3577,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	50299889	50303572	chr3:50299889-50303572	1	-	50300482	50302956	0	3	911,90,1516,	0,1098,2167,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	50299889	50304087	chr3:50299889-50304087	1	-	50300482	50302956	0	4	911,90,924,300,	0,1098,2167,3898,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	50299893	50312381	chr3:50299893-50312381	3	-	50300482	50302956	0	6	907,90,924,166,119,118,	0,1094,2163,3894,9765,12370,
#Partially deleted in new
chr3	50300310	50303573	chr3:50300310-50303573	1	-	50300482	50302956	0	3	490,924,108,	0,1746,3155,
#Partially deleted in new
chr3	50300481	50303573	chr3:50300481-50303573	1	-	50300482	50302179	0	4	319,90,149,108,	0,506,1575,2984,
#Partially deleted in new
chr3	50300481	50303573	chr3:50300481-50303573	1	-	50300482	50302410	0	4	319,90,567,108,	0,506,1575,2984,
#Partially deleted in new
chr3	50302646	50303574	chr3:50302646-50303574	0	-	50302646	50302956	789624	2	458,109,	0,819,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	50302748	50304116	chr3:50302748-50304116	0	-	50302748	50302956	789624	2	232,329,	0,1039,
#Deleted in new
chr3	50317789	50322782	chr3:50317789-50322782	1	-	50318128	50320489	789624	3	750,90,3214,	0,1166,1779,
#Deleted in new
chr3	50317795	50322906	chr3:50317795-50322906	3	-	50318128	50320489	789624	4	744,90,967,254,	0,1160,1773,4857,
#Deleted in new
chr3	50317808	50321713	chr3:50317808-50321713	1	-	50318128	50320489	789624	4	731,90,967,348,	0,1147,1760,3557,
#Deleted in new
chr3	50317811	50322777	chr3:50317811-50322777	1	-	50318128	50320489	789624	5	728,90,967,408,125,	0,1144,1757,3554,4841,
#Deleted in new
chr3	50318588	50322741	chr3:50318588-50322741	0	-	50318588	50318588	8553170	3	457,967,89,	0,980,4064,
#Partially deleted in new
chr3	50320026	50328157	chr3:50320026-50328157	0	-	50320026	50320026	8553170	3	509,121,204,	0,6330,7927,
#Deleted in new
chr3	50320126	50321217	chr3:50320126-50321217	0	-	50320126	50320489	789624	2	409,336,	0,755,
#Deleted in new
chr3	50320136	50320987	chr3:50320136-50320987	0	-	50320136	50320489	789624	2	399,151,	0,700,
#Deleted in new
chr3	50320245	50320948	chr3:50320245-50320948	0	-	50320245	50320489	789624	2	290,67,	0,636,
#Deleted in new
chr3	50320259	50322741	chr3:50320259-50322741	0	-	50320259	50320489	789624	3	276,206,89,	0,1308,2393,
#Deleted in new
chr3	50320346	50321149	chr3:50320346-50321149	0	-	50320346	50320489	789624	2	189,112,	0,691,
#Partially deleted in new
chr3	50324906	50328243	chr3:50324906-50328243	3	-	50326120	50328099	789624	3	1280,121,290,	0,1450,3047,
#Partially deleted in new
chr3	50326007	50328251	chr3:50326007-50328251	0	-	50327167	50328099	789624	4	179,121,192,298,	0,349,1020,1946,
#Partially deleted in new
chr3	50326007	50328206	chr3:50326007-50328206	0	-	50327167	50328099	789624	4	179,121,182,253,	0,349,1030,1946,
#Partially deleted in new
chr3	50326089	50328238	chr3:50326089-50328238	0	-	50326089	50326089	8553170	3	97,93,285,	0,295,1864,
#Partially deleted in new
chr3	50326355	50328195	chr3:50326355-50328195	0	-	50327196	50328099	789624	3	122,197,242,	0,672,1598,
#Partially deleted in new
chr3	50329781	50337464	chr3:50329781-50337464	1	-	50330580	50337319	0	5	946,116,298,105,292,	0,1552,1777,2268,7391,
#Partially deleted in new
chr3	50329785	50340936	chr3:50329785-50340936	1	-	50330580	50332058	0	5	942,116,298,105,381,	0,1548,1773,2264,10770,
#Partially deleted in new
chr3	50329787	50340841	chr3:50329787-50340841	1	-	50330580	50340805	0	6	940,116,298,105,119,286,	0,1546,1771,2262,8117,10768,
#Partially deleted in new
chr3	50329787	50340912	chr3:50329787-50340912	3	-	50330580	50340805	0	6	940,116,298,105,107,357,	0,1546,1771,2262,8117,10768,
#Partially deleted in new
chr3	50329787	50340841	chr3:50329787-50340841	0	-	50332125	50340805	0	5	940,116,298,105,286,	0,1546,1771,2262,10768,
#Partially deleted in new
chr3	50329787	50338233	chr3:50329787-50338233	1	-	50330580	50332058	0	6	940,116,298,105,107,91,	0,1546,1771,2262,8117,8355,
#Partially deleted in new
chr3	50329787	50340912	chr3:50329787-50340912	0	-	50331647	50340805	0	4	940,116,298,357,	0,1546,1771,10768,
#Partially deleted in new
chr3	50336376	50340980	chr3:50336376-50340980	0	-	50336376	50336376	8553170	2	1635,425,	0,4179,
#Partially deleted in new
chr3	50336569	50340830	chr3:50336569-50340830	0	-	50336569	50336569	8553170	3	1003,107,275,	0,1335,3986,
#Deleted in new
chr3	50336799	50338288	chr3:50336799-50338288	0	-	50336799	50336799	8553170	2	1212,146,	0,1343,
#Deleted in new
chr3	50337510	50338300	chr3:50337510-50338300	3	+	50337510	50337510	789624	1	790,	0,
#Partially deleted in new
chr3	50341105	50345697	chr3:50341105-50345697	3	+	50341105	50341105	8553170	2	123,127,	0,4465,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	50341109	50346852	chr3:50341109-50346852	3	-	50341409	50345579	0	12	376,126,122,126,173,101,89,138,54,117,109,1365,	0,464,700,905,1287,1808,2008,2197,2453,2624,4014,4378,
#Deleted in new
chr3	50341109	50342448	chr3:50341109-50342448	0	-	50341109	50341109	8553170	4	376,126,122,52,	0,464,700,1287,
#Partially deleted in new
chr3	50341113	50345732	chr3:50341113-50345732	1	-	50341409	50345579	0	11	372,126,122,126,259,89,138,54,117,109,245,	0,460,696,901,1283,2004,2193,2449,2620,4010,4374,
#Deleted in new
chr3	50341114	50343168	chr3:50341114-50343168	0	-	50341114	50341114	8553170	4	371,126,122,1154,	0,459,695,900,
#Partially deleted in new
chr3	50342036	50345721	chr3:50342036-50345721	0	-	50342036	50345195	789624	9	104,173,101,89,138,54,117,109,187,	0,360,881,1081,1270,1526,1697,3087,3498,
#Partially deleted in new
chr3	50342521	50345672	chr3:50342521-50345672	0	-	50345214	50345579	789624	7	48,101,89,54,117,113,185,	0,396,596,1041,1212,2602,2966,
#Deleted in new
chr3	50343168	50344036	chr3:50343168-50344036	0	-	50343168	50343168	8553170	3	276,54,303,	0,394,565,
#Partially deleted in new
chr3	50343400	50345721	chr3:50343400-50345721	0	-	50345214	50345579	789624	5	44,54,117,113,234,	0,162,333,1723,2087,
#Deleted in new
chr3	50344838	50345681	chr3:50344838-50345681	0	-	50344838	50344838	8553170	3	120,109,194,	0,285,649,
#Deleted in new
chr3	50347329	50350779	chr3:50347329-50350779	0	-	50347329	50347329	8553170	10	344,143,118,94,37,98,137,109,358,205,	0,429,794,987,1197,1355,1544,2056,2335,3245,
#Deleted in new
chr3	50347487	50351091	chr3:50347487-50351091	3	-	50347605	50350652	0	11	186,143,118,94,37,98,137,109,169,92,517,	0,271,636,829,1039,1197,1386,1898,2177,2443,3087,
#Deleted in new
chr3	50347487	50350782	chr3:50347487-50350782	0	-	50347487	50347487	8553170	8	186,143,118,94,256,137,443,852,	0,271,636,829,1039,1386,1898,2443,
#Deleted in new
chr3	50347487	50350782	chr3:50347487-50350782	0	-	50347487	50347487	8553170	3	186,2075,852,	0,271,2443,
#Deleted in new
chr3	50347487	50350767	chr3:50347487-50350767	0	-	50347487	50347487	8553170	9	186,143,118,94,37,326,105,169,837,	0,271,636,829,1039,1197,1898,2177,2443,
#Deleted in new
chr3	50347489	50350704	chr3:50347489-50350704	0	-	50349490	50350652	789624	9	184,483,94,37,98,137,109,92,130,	0,269,827,1037,1195,1384,1896,2441,3085,
#Deleted in new
chr3	50347490	50350754	chr3:50347490-50350754	0	-	50349734	50350652	789624	9	183,483,94,37,98,137,443,92,180,	0,268,826,1036,1194,1383,1895,2440,3084,
#Deleted in new
chr3	50347490	50350365	chr3:50347490-50350365	0	-	50347490	50347490	8553170	5	183,483,94,260,1492,	0,268,826,1032,1383,
#Deleted in new
chr3	50347493	50348786	chr3:50347493-50348786	0	-	50347493	50347493	8553170	4	180,143,37,102,	0,265,1033,1191,
#Deleted in new
chr3	50347498	50350766	chr3:50347498-50350766	0	-	50347498	50347498	8553170	10	175,143,118,94,37,98,137,105,164,834,	0,260,625,818,1028,1186,1375,1887,2166,2434,
#Deleted in new
chr3	50347517	50350781	chr3:50347517-50350781	0	-	50349734	50350652	789624	10	156,483,94,37,98,137,105,164,92,207,	0,241,799,1009,1167,1356,1868,2147,2413,3057,
#Deleted in new
chr3	50348145	50350781	chr3:50348145-50350781	0	-	50349734	50350652	789624	9	96,94,37,98,137,105,164,92,207,	0,171,381,539,728,1240,1519,1785,2429,
#Deleted in new
chr3	50348160	50350745	chr3:50348160-50350745	0	-	50349926	50350652	789624	9	81,94,37,98,137,109,169,110,171,	0,156,366,524,713,1225,1504,1752,2414,
#Deleted in new
chr3	50348252	50349129	chr3:50348252-50349129	0	-	50348252	50348252	8553170	2	530,256,	0,621,
#Deleted in new
chr3	50348315	50350781	chr3:50348315-50350781	0	-	50349734	50350652	789624	8	95,37,98,137,109,164,92,207,	0,211,369,558,1070,1349,1615,2259,
#Deleted in new
chr3	50349155	50350775	chr3:50349155-50350775	0	-	50349155	50349155	8553170	3	678,92,201,	0,775,1419,
#Deleted in new
chr3	50349434	50350821	chr3:50349434-50350821	0	-	50349434	50349434	8553170	2	588,247,	0,1140,
#Partially deleted in new
chr3	50350694	50354079	chr3:50350694-50354079	3	+	50351433	50353744	789624	4	290,152,38,839,	0,714,1314,2546,
#Partially deleted in new
chr3	50350844	50354069	chr3:50350844-50354069	1	+	50351433	50353744	789624	4	140,218,38,829,	0,498,1164,2396,
#Partially deleted in new
chr3	50350844	50354052	chr3:50350844-50354052	1	+	50351433	50353744	789624	4	144,218,38,812,	0,498,1164,2396,
#Partially deleted in new
chr3	50350857	50354032	chr3:50350857-50354032	1	+	50351433	50353744	789624	3	703,38,792,	0,1151,2383,
#Partially deleted in new
chr3	50350872	50353393	chr3:50350872-50353393	0	+	50350872	50350872	8553170	2	688,153,	0,2368,
#Partially deleted in new
chr3	50350891	50367923	chr3:50350891-50367923	3	+	50351433	50366322	789624	4	93,152,35,128,	0,517,15405,16904,
#Partially deleted in new
chr3	50351196	50358460	chr3:50351196-50358460	0	+	50351196	50351196	8553170	2	364,343,	0,6921,
#Deleted in new
chr3	50354748	50359610	chr3:50354748-50359610	3	-	50355342	50359063	789624	2	799,1398,	0,3464,
#Partially deleted in new
chr3	50362798	50503423	chr3:50362798-50503423	1	-	50364665	50503423	789624	39	2008,89,110,127,56,53,153,72,51,89,99,104,63,91,98,61,21,77,62,72,72,75,75,72,90,50,79,108,159,100,51,58,132,142,45,60,117,82,206,	0,2089,2276,2557,2834,3011,3212,3468,3779,4032,4212,4595,4843,5013,5339,7521,10266,11938,12845,13010,13164,13315,14668,14933,15209,15485,16116,16293,16633,16926,17169,17949,18196,21397,24769,31310,71514,113319,140419,
#Partially deleted in new
chr3	50362801	50503597	chr3:50362801-50503597	1	-	50364665	50503423	789624	38	2005,89,110,127,56,53,153,72,48,89,99,104,63,91,98,61,77,62,72,72,75,75,72,90,50,79,108,159,100,51,58,132,142,45,60,117,82,380,	0,2086,2273,2554,2831,3008,3209,3465,3776,4029,4209,4592,4840,5010,5336,7518,11935,12842,13007,13161,13312,14665,14930,15206,15482,16113,16290,16630,16923,17166,17946,18193,21394,24766,31307,71511,113316,140416,
#Partially deleted in new
chr3	50362801	50504244	chr3:50362801-50504244	1	-	50364665	50476198	789624	38	2005,89,110,127,56,53,153,72,48,89,99,104,63,91,98,61,77,62,72,72,75,75,72,90,50,79,108,159,100,51,58,132,142,45,60,117,82,176,	0,2086,2273,2554,2831,3008,3209,3465,3776,4029,4209,4592,4840,5010,5336,7518,11935,12842,13007,13161,13312,14665,14930,15206,15482,16113,16290,16630,16923,17166,17946,18193,21394,24766,31307,71511,113316,141267,
#Partially deleted in new
chr3	50362801	50503428	chr3:50362801-50503428	1	-	50364665	50503423	789624	38	2005,83,110,127,56,53,153,72,51,89,99,104,63,91,98,61,77,62,72,72,75,75,72,90,50,79,108,159,100,51,58,132,142,45,60,117,82,211,	0,2086,2273,2554,2831,3008,3209,3465,3776,4029,4209,4592,4840,5010,5336,7518,11935,12842,13007,13161,13312,14665,14930,15206,15482,16113,16290,16630,16923,17166,17946,18193,21394,24766,31307,71511,113316,140416,
#Deleted in new
chr3	50362854	50365782	chr3:50362854-50365782	0	-	50362854	50362854	8553170	4	1952,297,127,150,	0,2033,2501,2778,
#Partially deleted in new
chr3	50362891	50503423	chr3:50362891-50503423	3	-	50364665	50503423	789624	38	1915,83,110,127,56,53,153,72,48,89,99,104,63,91,98,61,77,62,72,72,75,75,72,90,50,79,108,159,100,51,58,132,142,45,60,117,82,206,	0,1996,2183,2464,2741,2918,3119,3375,3686,3939,4119,4502,4750,4920,5246,7428,11845,12752,12917,13071,13222,14575,14840,15116,15392,16023,16200,16540,16833,17076,17856,18103,21304,24676,31217,71421,113226,140326,
#Partially deleted in new
chr3	50364665	50503423	chr3:50364665-50503423	1	-	50364665	50503423	789624	39	141,83,110,127,56,53,153,72,48,89,99,104,63,91,98,61,21,77,62,72,72,75,75,72,90,50,79,108,159,100,51,58,132,142,45,60,117,82,206,	0,222,409,690,967,1144,1345,1601,1912,2165,2345,2728,2976,3146,3472,5654,8399,10071,10978,11143,11297,11448,12801,13066,13342,13618,14249,14426,14766,15059,15302,16082,16329,19530,22902,29443,69647,111452,138552,
#Deleted in new
chr3	50365333	50367845	chr3:50365333-50367845	0	+	50365333	50365333	8553170	3	505,35,50,	0,963,2462,
#Deleted in new
chr3	50365373	50368197	chr3:50365373-50368197	3	+	50365373	50365373	8553170	3	567,35,402,	0,923,2422,
#Deleted in new
chr3	50365384	50368197	chr3:50365384-50368197	0	+	50365384	50365384	789624	3	473,35,402,	0,912,2411,
#Deleted in new
chr3	50365395	50367463	chr3:50365395-50367463	0	+	50365395	50365395	8553170	3	443,35,27,	0,901,2041,
#Deleted in new
chr3	50366222	50368197	chr3:50366222-50368197	0	+	50366222	50366222	8553170	2	109,402,	0,1573,
#Deleted in new
chr3	50367464	50368197	chr3:50367464-50368197	0	+	50367464	50367464	8553170	2	57,402,	0,331,
#Partially deleted in new
chr3	50415802	50503634	chr3:50415802-50503634	0	-	50415802	50415802	8553170	4	414,117,82,417,	0,18510,60315,87415,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	50419780	50419899	chr3:50419780-50419899	7	+	50419780	50419780	16724991	1	119,	0,
#Partially deleted in new
chr3	50558024	50567665	chr3:50558024-50567665	1	-	50559656	50565699	789624	5	1713,148,26,396,203,	0,2892,3697,7441,9438,
#Partially deleted in new
chr3	50558030	50567751	chr3:50558030-50567751	1	-	50559656	50565699	789624	6	1707,148,26,396,89,289,	0,2886,3691,7435,7975,9432,
#Partially deleted in new
chr3	50558031	50570991	chr3:50558031-50570991	3	-	50559656	50565699	789624	5	1706,148,26,396,89,	0,2885,3690,7434,12871,
#Partially deleted in new
chr3	50558810	50567676	chr3:50558810-50567676	1	-	50559656	50565699	789624	5	927,148,26,175,214,	0,2106,2911,6715,8652,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	50559221	50567680	chr3:50559221-50567680	0	-	50562507	50565699	789624	6	516,148,26,216,396,218,	0,1695,2500,3151,6244,8241,
#Partially deleted in new
chr3	50559279	50567642	chr3:50559279-50567642	0	-	50559279	50559279	8553170	2	458,180,	0,8183,
#Partially deleted in new
chr3	50559282	50567621	chr3:50559282-50567621	0	-	50559282	50559282	8553170	4	455,148,26,159,	0,1634,2439,8180,
#Partially deleted in new
chr3	50559453	50571027	chr3:50559453-50571027	0	-	50559453	50559453	8553170	4	284,148,26,125,	0,1463,2268,11449,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	50559524	50561911	chr3:50559524-50561911	1	-	50559656	50561825	789624	3	213,148,190,	0,1392,2197,
#Partially deleted in new
chr3	50559598	50567625	chr3:50559598-50567625	0	-	50559598	50559598	8553170	5	139,148,26,89,163,	0,1318,2123,6407,7864,
#Deleted in new
chr3	50565383	50567676	chr3:50565383-50567676	0	-	50565383	50565383	8553170	2	317,214,	0,2079,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	50569151	50596168	chr3:50569151-50596168	3	+	50571104	50580417	789624	11	122,402,92,94,135,65,50,106,96,114,15788,	0,1779,2558,2963,7900,8357,8674,9669,10692,10964,11229,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	50569196	50584935	chr3:50569196-50584935	1	+	50571104	50580417	789624	11	378,402,92,94,135,65,50,106,96,114,4555,	0,1734,2513,2918,7855,8312,8629,9624,10647,10919,11184,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	50569477	50584748	chr3:50569477-50584748	0	+	50571104	50571786	789624	10	97,364,92,94,135,65,50,106,386,4368,	0,1453,2232,2637,7574,8031,8348,9343,10366,10903,
#Partially deleted in new
chr3	50569492	50580672	chr3:50569492-50580672	1	+	50571104	50580417	789624	11	53,402,92,94,135,65,50,106,96,114,292,	0,1438,2217,2622,7559,8016,8333,9328,10351,10623,10888,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	50569566	50580673	chr3:50569566-50580673	0	+	50569566	50569566	8553170	4	2235,135,65,830,	0,7485,7942,10277,
#Partially deleted in new
chr3	50569569	50577132	chr3:50569569-50577132	0	+	50571104	50571786	789624	5	242,364,92,94,81,	0,1361,2140,2545,7482,
#Partially deleted in new
chr3	50577123	50580676	chr3:50577123-50580676	0	+	50577123	50580417	789624	5	63,65,96,114,296,	0,385,2720,2992,3257,
#Deleted in new
chr3	50599878	50601148	chr3:50599878-50601148	3	-	50599878	50599878	8553170	4	18,114,64,143,	0,289,980,1127,
#Deleted in new
chr3	50606489	50611761	chr3:50606489-50611761	0	-	50606489	50606489	8553170	2	1653,3389,	0,1883,
#Deleted in new
chr3	50606495	50611772	chr3:50606495-50611772	1	-	50607606	50610443	789624	4	1647,221,157,142,	0,1877,3877,5135,
#Deleted in new
chr3	50606521	50611831	chr3:50606521-50611831	3	-	50607606	50611650	789624	3	1621,221,201,	0,1851,5109,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	50611519	50613900	chr3:50611519-50613900	0	+	50611519	50611519	8553170	4	218,136,95,109,	0,474,1328,2272,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr3	50611907	50649289	chr3:50611907-50649289	3	+	50617565	50648046	0	13	222,95,227,271,140,65,80,124,76,125,86,81,1396,	0,940,1884,5606,28458,29799,30345,32501,33802,34232,34832,35215,35986,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	50612327	50614117	chr3:50612327-50614117	0	+	50612327	50612327	8553170	3	372,95,326,	0,520,1464,
#Partially deleted in new
chr3	50617130	50647204	chr3:50617130-50647204	0	+	50617565	50647204	789624	10	111,271,140,65,80,124,76,125,86,82,	0,383,23235,24576,25122,27278,28579,29009,29609,29992,
#Partially deleted in new
chr3	50617130	50649297	chr3:50617130-50649297	1	+	50617565	50648046	0	11	111,271,140,65,80,124,76,125,86,81,1404,	0,383,23235,24576,25122,27278,28579,29009,29609,29992,30763,
#Partially deleted in new
chr3	50617169	50649288	chr3:50617169-50649288	1	+	50617565	50648046	0	11	57,271,140,65,80,124,76,125,86,81,1395,	0,344,23196,24537,25083,27239,28540,28970,29570,29953,30724,
#Partially deleted in new
chr3	50617389	50640505	chr3:50617389-50640505	0	+	50617565	50640505	789624	2	395,140,	0,22976,
#Deleted in new
chr3	50646211	50648627	chr3:50646211-50648627	0	+	50646211	50648046	789624	3	53,86,734,	0,528,1682,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	50669988	50672048	chr3:50669988-50672048	3	+	50669988	50669988	8553170	1	2060,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	50670691	50671730	chr3:50670691-50671730	1	+	50670691	50670691	8553170	2	485,360,	0,679,
#Deleted in new
chr3	50675079	50675163	chr3:50675079-50675163	3	+	50675079	50675079	5263520	1	84,	0,
#Partially deleted in new
chr3	50675240	51384198	chr3:50675240-51384198	3	+	50675263	51381559	789624	53	60,84,41,56,97,149,85,42,155,82,61,148,89,126,125,163,107,172,98,84,101,82,171,193,128,147,99,95,76,101,59,149,86,27,96,61,94,149,87,105,142,167,87,180,84,117,122,139,148,119,88,83,3149,	0,103434,166434,214785,258740,389207,400115,414002,414989,471308,484003,485314,533533,538881,550408,552042,552741,553420,554271,561104,562249,571485,584915,595574,599838,602367,604865,634991,636763,637235,637603,639739,654897,657760,657917,663118,663694,665996,673611,675047,679641,680848,681166,681721,682517,682720,685270,686618,687286,699228,700507,704884,705809,
#Deleted in new
chr3	50685550	50685791	chr3:50685550-50685791	7	-	50685550	50685550	16724991	1	241,	0,
#Deleted in new
chr3	50719481	50719951	chr3:50719481-50719951	7	-	50719481	50719481	16724991	1	470,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	50786673	50788285	chr3:50786673-50788285	7	-	50786673	50786673	16724991	2	597,712,	0,900,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	50876711	50877657	chr3:50876711-50877657	7	-	50876711	50876711	16724991	2	145,589,	0,357,
#Partially deleted in new
chr3	51385046	51389397	chr3:51385046-51389397	3	+	51385333	51389089	789624	4	390,128,142,493,	0,1161,2690,3858,
#Partially deleted in new
chr3	51385356	51389262	chr3:51385356-51389262	0	+	51385356	51386914	789624	5	80,128,138,142,358,	0,851,1552,2380,3548,
#Partially deleted in new
chr3	51385408	51389344	chr3:51385408-51389344	0	+	51385408	51385408	8553170	3	927,142,440,	0,2328,3496,
#Partially deleted in new
chr3	51386636	51389344	chr3:51386636-51389344	0	+	51386636	51386636	8553170	3	410,142,440,	0,1100,2268,
#Deleted in new
chr3	51387687	51389149	chr3:51387687-51389149	0	+	51387687	51387687	8553170	2	191,245,	0,1217,
#Deleted in new
chr3	51391267	51397908	chr3:51391267-51397908	3	+	51391399	51394072	789624	1	6641,	0,
#Partially deleted in new
chr3	51395866	51499994	chr3:51395866-51499994	3	-	51398768	51483828	0	25	1258,93,253,102,74,105,94,234,85,83,199,1264,125,170,210,180,159,102,513,138,114,74,77,118,122,	0,2868,7276,16512,17126,17415,18083,18757,20920,22249,22811,23867,26440,31505,33394,34166,37239,45103,45518,47899,67247,70936,75062,87852,104006,
#Partially deleted in new
chr3	51395866	51500002	chr3:51395866-51500002	1	-	51398768	51483828	0	25	1258,93,253,102,74,105,94,234,85,83,199,1264,125,170,210,180,159,102,513,138,114,71,77,118,130,	0,2868,7276,16512,17126,17415,18083,18757,20920,22249,22811,23867,26440,31505,33394,34166,37239,45103,45518,47899,67247,70939,75062,87852,104006,
#Partially deleted in new
chr3	51397841	51483838	chr3:51397841-51483838	1	-	51398768	51483828	0	17	986,253,102,74,105,94,234,85,83,199,1217,159,138,114,74,77,120,	0,5301,14537,15151,15440,16108,16782,18945,20274,20836,21892,43897,45924,65272,68961,73087,85877,
#Deleted in new
chr3	51541143	51541870	chr3:51541143-51541870	0	+	51541143	51541143	8553170	1	727,	0,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr3	51541579	51668667	chr3:51541579-51668667	3	+	51590420	51663420	789624	22	71,193,202,140,117,227,183,134,197,343,178,252,119,119,100,206,173,197,200,90,93,6242,	0,48787,85973,87754,88692,89125,91997,92322,94013,95581,96564,97839,98301,100169,102295,103444,104011,104705,114391,116000,118446,120846,
#Partially deleted in new
chr3	51541579	51663594	chr3:51541579-51663594	0	+	51541579	51541579	8553170	22	71,193,202,140,117,227,183,134,197,422,178,252,119,119,100,206,173,197,200,90,93,1169,	0,48787,85973,87754,88692,89125,91997,92322,94013,95502,96564,97839,98301,100169,102295,103444,104011,104705,114391,116000,118446,120846,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	51611437	51611562	chr3:51611437-51611562	3	-	51611437	51611437	8553170	1	125,	0,
#Partially deleted in new
chr3	51629390	51663457	chr3:51629390-51663457	0	+	51629390	51663420	789624	18	83,227,183,134,197,343,178,252,119,119,100,206,173,197,200,90,93,1032,	0,1314,4186,4511,6202,7770,8753,10028,10490,12358,14484,15633,16200,16894,26580,28189,30635,33035,
#Partially deleted in new
chr3	51629392	51630931	chr3:51629392-51630931	0	+	51629392	51629392	8553170	2	81,660,	0,879,
#Partially deleted in new
chr3	51630321	51663594	chr3:51630321-51663594	0	+	51630321	51630321	8553170	17	67,227,183,119,197,343,1527,119,119,100,206,173,197,200,90,93,1169,	0,383,3255,3595,5271,6839,7822,9559,11427,13553,14702,15269,15963,25649,27258,29704,32104,
#Partially deleted in new
chr3	51662692	51684467	chr3:51662692-51684467	0	+	51674304	51684467	789624	3	184,292,55,	0,11578,21720,
#Partially deleted in new
chr3	51671174	51704322	chr3:51671174-51704322	1	+	51674304	51704016	789624	6	114,52,292,222,169,599,	0,1166,3096,13238,28231,32549,
#Partially deleted in new
chr3	51671174	51704018	chr3:51671174-51704018	0	+	51671174	51671174	789624	4	114,222,169,295,	0,13238,28231,32549,
#Partially deleted in new
chr3	51671174	51704322	chr3:51671174-51704322	3	+	51674304	51704016	789624	6	114,92,292,222,169,599,	0,1035,3096,13238,28231,32549,
#Partially deleted in new
chr3	51671174	51704322	chr3:51671174-51704322	1	+	51674304	51704016	789624	4	114,292,169,599,	0,3096,28231,32549,
#Partially deleted in new
chr3	51671231	51704323	chr3:51671231-51704323	1	+	51674304	51704016	789624	5	57,292,222,169,600,	0,3039,13181,28174,32492,
#Deleted in new
chr3	51671237	51684573	chr3:51671237-51684573	0	+	51674304	51684573	789624	4	51,92,292,161,	0,972,3033,13175,
#Deleted in new
chr3	51671244	51684607	chr3:51671244-51684607	0	+	51674304	51684607	789624	4	44,52,292,195,	0,1096,3026,13168,
#Partially deleted in new
chr3	51671254	51704283	chr3:51671254-51704283	1	+	51674304	51704016	789624	5	1047,292,222,169,560,	0,3016,13158,28151,32469,
#Partially deleted in new
chr3	51671273	51704321	chr3:51671273-51704321	1	+	51674304	51704016	789624	5	274,292,222,169,598,	0,2997,13139,28132,32450,
#Partially deleted in new
chr3	51671295	51704317	chr3:51671295-51704317	1	+	51674304	51704016	789624	5	36,292,222,169,594,	0,2975,13117,28110,32428,
#Partially deleted in new
chr3	51671626	51703809	chr3:51671626-51703809	0	+	51671626	51671626	789624	4	77,222,169,86,	0,12786,27779,32097,
#Partially deleted in new
chr3	51671827	51699572	chr3:51671827-51699572	0	+	51674304	51699572	789624	4	474,292,222,167,	0,2443,12585,27578,
#Partially deleted in new
chr3	51671894	51699575	chr3:51671894-51699575	0	+	51674304	51699575	789624	4	189,292,222,170,	0,2376,12518,27511,
#Deleted in new
chr3	51674476	51684559	chr3:51674476-51684559	0	+	51674476	51674476	8553170	3	86,89,147,	0,6865,9936,
#Partially deleted in new
chr3	51681460	51704317	chr3:51681460-51704317	0	+	51681460	51681460	8553170	3	3174,169,594,	0,17945,22263,
#Partially deleted in new
chr3	51707069	51718410	chr3:51707069-51718410	3	+	51708983	51718112	0	6	98,586,838,1076,181,372,	0,1778,5403,7992,10567,10969,
#Partially deleted in new
chr3	51707087	51718112	chr3:51707087-51718112	0	+	51708983	51713983	789624	7	80,586,838,158,1076,181,74,	0,1760,5385,6876,7974,10549,10951,
#Partially deleted in new
chr3	51707089	51718613	chr3:51707089-51718613	0	+	51707089	51707089	789624	4	78,1076,181,575,	0,7972,10547,10949,
#Partially deleted in new
chr3	51707304	51718613	chr3:51707304-51718613	0	+	51707304	51707304	8553170	4	2129,3665,181,575,	0,5168,10332,10734,
#Deleted in new
chr3	51707410	51709193	chr3:51707410-51709193	0	+	51708983	51709193	789624	2	244,346,	0,1437,
#Partially deleted in new
chr3	51708844	51718252	chr3:51708844-51718252	1	+	51708983	51718112	789624	6	589,838,122,120,181,214,	0,3628,6217,7173,8792,9194,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	51711271	51712581	chr3:51711271-51712581	0	+	51711271	51711271	8553170	2	448,109,	0,1201,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	51711271	51714068	chr3:51711271-51714068	0	+	51711271	51711271	8553170	3	448,838,105,	0,1201,2692,
#Partially deleted in new
chr3	51778560	51779187	chr3:51778560-51779187	1	-	51778622	51778946	789624	2	431,15,	0,612,
#Partially deleted in new
chr3	51778562	51779241	chr3:51778562-51779241	3	-	51778622	51779224	789624	2	429,32,	0,647,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	51798802	51830545	chr3:51798802-51830545	0	+	51829475	51830545	8553170	10	162,31,171,441,102,1934,33,71,48,143,	0,594,808,6785,19167,28071,30471,30620,30862,31600,
#Partially deleted in new
chr3	51817602	51819345	chr3:51817602-51819345	7	+	51817602	51817602	16724991	3	160,102,152,	0,367,1591,
#Partially deleted in new
chr3	51817603	51818314	chr3:51817603-51818314	4	+	51817603	51817603	16724991	2	468,106,	0,605,
#Partially deleted in new
chr3	51817614	51818339	chr3:51817614-51818339	4	+	51817614	51817614	16724991	3	148,102,131,	0,355,594,
#Partially deleted in new
chr3	51818031	51819635	chr3:51818031-51819635	5	+	51818031	51818031	16724991	3	40,263,442,	0,177,1162,
#Partially deleted in new
chr3	51819199	51819619	chr3:51819199-51819619	5	+	51819199	51819199	16724991	1	420,	0,
#Partially deleted in new
chr3	51829435	51830801	chr3:51829435-51830801	1	+	51829475	51830801	789624	3	58,48,399,	0,229,967,
#Partially deleted in new
chr3	51829435	51830856	chr3:51829435-51830856	1	+	51829475	51830728	789624	3	58,48,344,	0,229,1077,
#Partially deleted in new
chr3	51829829	51830856	chr3:51829829-51830856	0	+	51829829	51829829	8553170	2	24,454,	0,573,
#Partially deleted in new
chr3	51861628	51863423	chr3:51861628-51863423	0	+	51861628	51861628	8553170	3	97,93,437,	0,229,1358,
#Partially deleted in new
chr3	51861637	51863424	chr3:51861637-51863424	3	+	51861666	51863370	789624	3	47,93,438,	0,220,1349,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	51872177	51872464	chr3:51872177-51872464	3	+	51872177	51872177	8553170	1	287,	0,
#Deleted in new
chr3	51873595	51875767	chr3:51873595-51875767	3	+	51873595	51873595	789624	3	157,463,1380,	0,240,792,
#Deleted in new
chr3	51873720	51875584	chr3:51873720-51875584	3	-	51873732	51875531	789624	2	455,57,	0,1807,
#Partially deleted in new
chr3	51894875	51903335	chr3:51894875-51903335	3	-	51894889	51903272	789624	4	461,63,105,66,	0,1956,8109,8394,
#Partially deleted in new
chr3	51933429	51941941	chr3:51933429-51941941	3	-	51933505	51941867	0	15	170,74,80,146,63,135,101,93,125,127,42,68,110,83,161,	0,278,1042,1201,1767,1912,2162,2827,3001,3762,4115,4239,4665,7979,8351,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	51942344	51948862	chr3:51942344-51948862	1	+	51943355	51948480	0	12	364,117,190,129,189,133,227,150,87,178,156,552,	0,585,1004,1744,2045,2433,2653,3150,3508,3821,5395,5966,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	51942344	51948867	chr3:51942344-51948867	3	+	51943355	51948480	0	11	364,190,129,189,133,227,150,87,178,156,557,	0,1004,1744,2045,2433,2653,3150,3508,3821,5395,5966,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	51942358	51948862	chr3:51942358-51948862	1	+	51942689	51948480	0	11	350,185,129,189,133,227,150,87,178,156,552,	0,995,1730,2031,2419,2639,3136,3494,3807,5381,5952,
#Deleted in new
chr3	51942370	51948603	chr3:51942370-51948603	0	+	51942689	51943491	789624	11	338,190,129,189,133,227,150,87,178,156,293,	0,978,1718,2019,2407,2627,3124,3482,3795,5369,5940,
#Deleted in new
chr3	51942936	51944900	chr3:51942936-51944900	0	+	51942936	51942936	8553170	4	110,190,129,511,	0,412,1152,1453,
#Deleted in new
chr3	51943298	51944717	chr3:51943298-51944717	0	+	51943298	51943298	8553170	3	240,129,328,	0,790,1091,
#Deleted in new
chr3	51943310	51945628	chr3:51943310-51945628	0	+	51943355	51945628	789624	6	228,129,189,133,227,134,	0,778,1079,1467,1687,2184,
#Deleted in new
chr3	51944786	51946261	chr3:51944786-51946261	0	+	51944786	51944786	8553170	4	438,150,87,96,	0,708,1066,1379,
#Deleted in new
chr3	51947624	51948482	chr3:51947624-51948482	0	+	51947624	51947624	8553170	2	271,172,	0,686,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	51951848	51953902	chr3:51951848-51953902	3	-	51951848	51951848	8553170	1	2054,	0,
#Deleted in new
chr3	51955313	51957504	chr3:51955313-51957504	3	+	51955652	51956759	789624	1	2191,	0,
#Deleted in new
chr3	51957453	51967457	chr3:51957453-51967457	3	-	51958060	51961240	789624	13	896,170,53,64,45,75,129,132,117,33,24,145,132,	0,1336,1593,1775,1913,2123,2441,2735,3072,3412,3556,3706,9872,
#Deleted in new
chr3	51957455	51962892	chr3:51957455-51962892	1	-	51958060	51961240	789624	13	894,170,53,64,45,75,129,132,117,33,24,145,83,	0,1334,1591,1773,1911,2121,2439,2733,3070,3410,3554,3704,5354,
#Deleted in new
chr3	51957455	51962892	chr3:51957455-51962892	1	-	51958060	51961240	789624	12	894,170,53,64,45,75,132,117,33,24,145,83,	0,1334,1591,1773,1911,2121,2733,3070,3410,3554,3704,5354,
#Deleted in new
chr3	51957457	51967445	chr3:51957457-51967445	1	-	51958060	51961240	789624	14	892,170,53,64,45,75,129,132,117,33,24,145,148,120,	0,1332,1589,1771,1909,2119,2437,2731,3068,3408,3552,3702,4483,9868,
#Deleted in new
chr3	51957457	51968410	chr3:51957457-51968410	1	-	51958060	51961240	789624	14	892,170,53,64,45,75,132,117,33,24,145,83,109,67,	0,1332,1589,1771,1909,2119,2731,3068,3408,3552,3702,5352,9868,10886,
#Deleted in new
chr3	51957457	51961636	chr3:51957457-51961636	0	-	51957457	51957457	8553170	10	892,170,53,64,45,75,426,373,24,477,	0,1332,1589,1771,1909,2119,2437,3068,3552,3702,
#Deleted in new
chr3	51957457	51961636	chr3:51957457-51961636	0	-	51957457	51957457	8553170	11	892,170,53,64,45,75,129,132,373,24,477,	0,1332,1589,1771,1909,2119,2437,2731,3068,3552,3702,
#Deleted in new
chr3	51957458	51967448	chr3:51957458-51967448	0	-	51960601	51961240	789624	11	891,170,53,64,132,112,33,24,145,340,123,	0,1331,1588,1770,2730,3067,3407,3551,3701,4290,9867,
#Deleted in new
chr3	51957459	51963256	chr3:51957459-51963256	0	-	51957459	51957459	8553170	12	890,170,53,64,45,75,129,132,373,24,145,447,	0,1330,1587,1769,1907,2117,2435,2729,3066,3550,3700,5350,
#Deleted in new
chr3	51957494	51962079	chr3:51957494-51962079	1	-	51958103	51961240	789624	13	658,170,53,64,45,75,129,132,117,33,24,145,139,	0,1295,1552,1734,1872,2082,2400,2694,3031,3371,3515,3665,4446,
#Deleted in new
chr3	51959905	51968403	chr3:51959905-51968403	0	-	51959905	51961240	789624	8	118,132,117,33,24,111,109,60,	0,283,620,960,1104,1254,7420,8438,
#Deleted in new
chr3	51960201	51968184	chr3:51960201-51968184	0	-	51960201	51961240	789624	9	119,117,33,24,145,148,83,109,59,	0,324,664,808,958,1739,2608,7124,7924,
#Deleted in new
chr3	51960255	51968409	chr3:51960255-51968409	0	-	51960255	51961240	789624	7	65,117,33,24,145,109,66,	0,270,610,754,904,7070,8088,
#Partially deleted in new
chr3	51960300	51974016	chr3:51960300-51974016	0	-	51960300	51961240	789624	7	20,117,33,24,145,148,52,	0,225,565,709,859,1640,13664,
#Deleted in new
chr3	51960521	51968387	chr3:51960521-51968387	0	-	51960521	51961240	789624	6	121,33,24,145,109,78,	0,344,488,638,6804,7788,
#Deleted in new
chr3	51960556	51967454	chr3:51960556-51967454	0	-	51960556	51961240	789624	6	86,33,24,145,146,129,	0,309,453,603,1192,6769,
#Deleted in new
chr3	51960628	51967445	chr3:51960628-51967445	0	-	51960628	51960628	8553170	4	270,24,145,120,	0,381,531,6697,
#Deleted in new
chr3	51960865	51967454	chr3:51960865-51967454	0	-	51960865	51961240	789624	6	33,24,145,148,83,129,	0,144,294,1075,1944,6460,
#Partially deleted in new
chr3	51961211	51974031	chr3:51961211-51974031	3	-	51961211	51961211	8553170	4	93,148,239,67,	0,729,10248,12753,
#Partially deleted in new
chr3	51968509	51983409	chr3:51968509-51983409	3	-	51969425	51971670	0	5	1096,242,239,270,209,	0,1433,2950,5455,14691,
#Partially deleted in new
chr3	51968510	51974630	chr3:51968510-51974630	1	-	51969425	51971670	789624	6	1095,181,29,26,239,666,	0,1432,2095,2251,2949,5454,
#Partially deleted in new
chr3	51968515	51974630	chr3:51968515-51974630	0	-	51968515	51968515	8553170	3	1090,242,666,	0,1427,5449,
#Partially deleted in new
chr3	51968529	51974031	chr3:51968529-51974031	1	-	51969425	51971670	0	4	1076,242,433,67,	0,1413,2930,5435,
#Partially deleted in new
chr3	51968552	51974066	chr3:51968552-51974066	1	-	51969425	51971670	0	4	1053,242,239,102,	0,1390,2907,5412,
#Partially deleted in new
chr3	51969083	51974021	chr3:51969083-51974021	1	-	51969828	51971670	789624	3	1101,239,57,	0,2376,4881,
#Partially deleted in new
chr3	51969272	51974049	chr3:51969272-51974049	1	-	51969425	51971670	0	5	333,242,239,81,85,	0,670,2187,2539,4692,
#Partially deleted in new
chr3	51971336	51974079	chr3:51971336-51974079	0	-	51971336	51971336	8553170	2	362,115,	0,2628,
#Partially deleted in new
chr3	51971425	51980474	chr3:51971425-51980474	0	+	51971553	51980474	789624	4	392,212,116,82,	0,6445,6833,8967,
#Partially deleted in new
chr3	51973683	51980468	chr3:51973683-51980468	0	+	51973851	51980468	789624	4	222,212,116,76,	0,4187,4575,6709,
#Partially deleted in new
chr3	51974705	51987176	chr3:51974705-51987176	0	+	51977888	51984153	789624	10	135,212,116,112,105,95,77,90,57,189,	0,3165,3553,9341,10655,11146,11549,11709,11899,12282,
#Partially deleted in new
chr3	51975049	51989183	chr3:51975049-51989183	2	+	51975135	51984153	789624	17	155,212,116,112,65,105,95,77,90,57,74,50,145,69,80,61,273,	0,2821,3209,8997,10157,10311,10802,11205,11365,11555,11938,12097,12259,12506,13474,13716,13861,
#Partially deleted in new
chr3	51975049	51987188	chr3:51975049-51987188	0	+	51975135	51984153	789624	11	155,212,116,112,105,95,77,90,57,74,42,	0,2821,3209,8997,10311,10802,11205,11365,11555,11938,12097,
#Partially deleted in new
chr3	51975056	51989179	chr3:51975056-51989179	0	+	51975135	51984153	789624	16	148,212,116,112,65,105,95,77,90,457,50,145,69,80,61,269,	0,2814,3202,8990,10150,10304,10795,11198,11358,11548,12090,12252,12499,13467,13709,13854,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	51975056	51989134	chr3:51975056-51989134	0	+	51975135	51984153	789624	9	148,212,116,112,105,1602,1048,61,224,	0,2814,3202,8990,10304,10795,12499,13709,13854,
#Partially deleted in new
chr3	51975059	51989174	chr3:51975059-51989174	1	+	51975135	51989075	789624	16	145,212,116,65,105,95,77,90,57,74,50,145,69,80,61,264,	0,2811,3199,10147,10301,10792,11195,11355,11545,11928,12087,12249,12496,13464,13706,13851,
#Partially deleted in new
chr3	51975059	51986889	chr3:51975059-51986889	0	+	51975059	51975059	8553170	5	145,112,105,77,475,	0,8987,10301,11195,11355,
#Partially deleted in new
chr3	51975060	51989084	chr3:51975060-51989084	0	+	51975135	51984153	789624	16	144,212,116,112,105,95,77,90,57,109,50,145,69,80,61,174,	0,2810,3198,8986,10300,10791,11194,11354,11544,11892,12086,12248,12495,13463,13705,13850,
#Partially deleted in new
chr3	51975063	51989165	chr3:51975063-51989165	0	+	51975135	51984153	789624	15	141,212,116,112,65,105,95,77,647,50,145,69,80,61,255,	0,2807,3195,8983,10143,10297,10788,11191,11351,12083,12245,12492,13460,13702,13847,
#Partially deleted in new
chr3	51975063	51989176	chr3:51975063-51989176	0	+	51975135	51984153	789624	12	141,212,116,112,105,95,77,1039,69,80,61,266,	0,2807,3195,8983,10297,10788,11191,11351,12492,13460,13702,13847,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	51975065	51989084	chr3:51975065-51989084	0	+	51975135	51984153	789624	12	139,212,116,112,105,95,77,90,849,1048,61,174,	0,2805,3193,8981,10295,10786,11189,11349,11539,12490,13700,13845,
#Partially deleted in new
chr3	51975065	51989162	chr3:51975065-51989162	0	+	51975135	51984153	789624	11	139,212,116,112,105,95,77,1210,80,61,252,	0,2805,3193,8981,10295,10786,11189,11349,13458,13700,13845,
#Partially deleted in new
chr3	51975065	51989170	chr3:51975065-51989170	0	+	51975135	51984153	789624	14	139,212,116,112,105,95,77,647,50,145,69,80,61,260,	0,2805,3193,8981,10295,10786,11189,11349,12081,12243,12490,13458,13700,13845,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	51975065	51989170	chr3:51975065-51989170	0	+	51975135	51984153	789624	12	139,212,116,112,105,95,77,90,57,1616,61,260,	0,2805,3193,8981,10295,10786,11189,11349,11539,11922,13700,13845,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	51975065	51989176	chr3:51975065-51989176	0	+	51975135	51985877	789624	10	139,212,116,105,95,77,1039,1048,61,266,	0,2805,3193,10295,10786,11189,11349,12490,13700,13845,
#Partially deleted in new
chr3	51975065	51989036	chr3:51975065-51989036	0	+	51975135	51984153	789624	10	139,212,116,112,105,1602,69,80,61,126,	0,2805,3193,8981,10295,10786,12490,13458,13700,13845,
#Partially deleted in new
chr3	51975067	51981196	chr3:51975067-51981196	3	+	51975135	51981018	789624	5	137,212,116,236,361,	0,2803,3191,5325,5768,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	51975067	51989160	chr3:51975067-51989160	0	+	51975135	51985877	789624	9	137,112,105,95,77,90,1999,61,250,	0,8979,10293,10784,11187,11347,11537,13698,13843,
#Partially deleted in new
chr3	51975076	51987196	chr3:51975076-51987196	0	+	51975135	51987196	789624	10	128,112,65,105,95,77,90,57,74,50,	0,8970,10130,10284,10775,11178,11338,11528,11911,12070,
#Partially deleted in new
chr3	51975099	51989171	chr3:51975099-51989171	0	+	51975135	51985877	789624	10	105,212,116,105,1345,145,69,80,61,261,	0,2771,3159,10261,10752,12209,12456,13424,13666,13811,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	51975101	51979007	chr3:51975101-51979007	0	+	51975101	51975101	8553170	3	103,212,749,	0,2769,3157,
#Partially deleted in new
chr3	51975102	51981195	chr3:51975102-51981195	1	+	51975135	51980929	789624	3	102,212,360,	0,2768,5733,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	51975115	51984697	chr3:51975115-51984697	0	+	51975115	51975115	8553170	2	89,651,	0,8931,
#Partially deleted in new
chr3	51975117	51987428	chr3:51975117-51987428	0	+	51984064	51987428	789624	12	87,116,112,65,105,95,77,90,57,74,50,120,	0,3141,8929,10089,10243,10734,11137,11297,11487,11870,12029,12191,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	51975125	51989165	chr3:51975125-51989165	0	+	51975135	51984153	789624	14	79,212,116,112,65,105,95,77,647,50,145,1048,61,255,	0,2745,3133,8921,10081,10235,10726,11129,11289,12021,12183,12430,13640,13785,
#Partially deleted in new
chr3	51977883	51989037	chr3:51977883-51989037	0	+	51977883	51989037	789624	17	199,116,236,112,65,105,95,77,90,57,74,50,145,69,80,61,127,	0,375,2509,6163,7323,7477,7968,8371,8531,8721,9104,9263,9425,9672,10640,10882,11027,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr3	51977944	51989151	chr3:51977944-51989151	0	+	51977944	51984153	789624	13	138,116,112,105,95,77,90,457,50,145,1048,61,241,	0,314,6102,7416,7907,8310,8470,8660,9202,9364,9611,10821,10966,
#Partially deleted in new
chr3	51977986	51988789	chr3:51977986-51988789	0	+	51977986	51984153	789624	13	96,116,112,65,105,95,77,90,57,74,69,80,24,	0,272,6060,7220,7374,7865,8268,8428,8618,9001,9569,10537,10779,
#Partially deleted in new
chr3	51977986	51989134	chr3:51977986-51989134	0	+	51977986	51984153	789624	14	96,116,112,105,95,77,90,57,209,145,69,80,61,224,	0,272,6060,7374,7865,8268,8428,8618,9001,9322,9569,10537,10779,10924,
#Partially deleted in new
chr3	51978066	51989011	chr3:51978066-51989011	0	+	51978066	51986271	789624	12	16,116,105,77,90,57,209,145,69,80,61,101,	0,192,7294,8188,8348,8538,8921,9242,9489,10457,10699,10844,
#Partially deleted in new
chr3	51978079	51986436	chr3:51978079-51986436	0	+	51978079	51984068	789624	7	3,116,98,105,95,77,22,	0,179,5981,7281,7772,8175,8335,
#Partially deleted in new
chr3	51978368	51987123	chr3:51978368-51987123	0	+	51978368	51985877	789624	7	6,105,95,77,90,57,136,	0,6992,7483,7886,8046,8236,8619,
#Partially deleted in new
chr3	51983277	51989202	chr3:51983277-51989202	3	+	51984064	51989075	0	15	312,112,65,105,95,77,90,57,74,50,145,69,80,61,292,	0,769,1929,2083,2574,2977,3137,3327,3710,3869,4031,4278,5246,5488,5633,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	51983339	51984577	chr3:51983339-51984577	0	+	51983339	51983339	8553170	2	250,531,	0,707,
#Partially deleted in new
chr3	51983414	51987153	chr3:51983414-51987153	0	+	51984064	51985877	789624	8	175,112,95,77,90,57,74,7,	0,632,2437,2840,3000,3190,3573,3732,
#Partially deleted in new
chr3	51983434	51989197	chr3:51983434-51989197	0	+	51984064	51985877	789624	14	155,112,105,95,77,90,57,74,50,145,69,80,61,287,	0,612,1926,2417,2820,2980,3170,3553,3712,3874,4121,5089,5331,5476,
#Partially deleted in new
chr3	51983442	51989197	chr3:51983442-51989197	1	+	51984064	51989075	0	14	147,112,65,95,77,90,57,74,50,145,69,80,61,287,	0,604,1958,2409,2812,2972,3162,3545,3704,3866,4113,5081,5323,5468,
#Partially deleted in new
chr3	51983442	51989197	chr3:51983442-51989197	1	+	51984064	51989075	0	13	147,112,65,105,95,77,90,57,74,69,80,61,287,	0,604,1764,1918,2409,2812,2972,3162,3545,4113,5081,5323,5468,
#Partially deleted in new
chr3	51983442	51989197	chr3:51983442-51989197	0	+	51984064	51987331	789624	13	147,112,65,105,95,77,90,57,145,69,80,61,287,	0,604,1764,1918,2409,2812,2972,3162,3866,4113,5081,5323,5468,
#Partially deleted in new
chr3	51983442	51989197	chr3:51983442-51989197	1	+	51984064	51989075	0	13	147,112,65,105,46,57,74,50,145,69,80,61,287,	0,604,1764,1918,2409,3162,3545,3704,3866,4113,5081,5323,5468,
#Partially deleted in new
chr3	51983476	51989195	chr3:51983476-51989195	1	+	51984064	51989075	0	15	108,112,65,105,95,77,90,57,74,50,145,69,80,61,285,	0,570,1730,1884,2375,2778,2938,3128,3511,3670,3832,4079,5047,5289,5434,
#Partially deleted in new
chr3	51983522	51987611	chr3:51983522-51987611	0	+	51984064	51986415	789624	9	67,112,65,105,77,90,57,74,56,	0,524,1684,1838,2732,2892,3082,3465,4033,
#Partially deleted in new
chr3	51983526	51987339	chr3:51983526-51987339	0	+	51983526	51983526	8553170	9	63,112,65,105,95,77,57,117,193,	0,520,1680,1834,2325,2728,3078,3418,3620,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	51983534	51988230	chr3:51983534-51988230	0	+	51983534	51983534	8553170	12	55,112,65,105,95,77,90,57,74,50,145,675,	0,512,1672,1826,2317,2720,2880,3070,3453,3612,3774,4021,
#Partially deleted in new
chr3	51983534	51989174	chr3:51983534-51989174	1	+	51984064	51989075	789624	14	55,112,65,95,77,90,57,74,50,145,69,80,61,264,	0,512,1672,2317,2720,2880,3070,3453,3612,3774,4021,4989,5231,5376,
#Partially deleted in new
chr3	51983536	51987061	chr3:51983536-51987061	0	+	51984064	51987061	789624	9	53,112,65,132,95,77,90,57,74,	0,510,1670,1797,2315,2718,2878,3068,3451,
#Partially deleted in new
chr3	51984087	51986980	chr3:51984087-51986980	0	+	51984087	51984087	8553170	8	71,65,105,95,77,90,57,36,	0,1119,1273,1764,2167,2327,2517,2857,
#Partially deleted in new
chr3	51984136	51989153	chr3:51984136-51989153	0	+	51984136	51985877	789624	10	22,105,95,77,90,849,69,80,61,243,	0,1224,1715,2118,2278,2468,3419,4387,4629,4774,
#Deleted in new
chr3	51984844	51986281	chr3:51984844-51986281	0	+	51984844	51984844	8553170	4	427,105,95,27,	0,516,1007,1410,
#Deleted in new
chr3	51984862	51987070	chr3:51984862-51987070	0	+	51984862	51984862	8553170	3	603,480,656,	0,989,1552,
#Partially deleted in new
chr3	51984870	51989177	chr3:51984870-51989177	0	+	51984870	51984870	8553170	10	595,95,77,90,57,466,69,80,61,267,	0,981,1384,1544,1734,2117,2685,3653,3895,4040,
#Deleted in new
chr3	51986209	51987453	chr3:51986209-51987453	0	+	51986209	51986209	8553170	6	122,90,57,74,50,145,	0,205,395,778,937,1099,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	51986598	51988064	chr3:51986598-51988064	0	+	51986598	51986598	8553170	1	1466,	0,
#Partially deleted in new
chr3	51986931	51989165	chr3:51986931-51989165	0	+	51986931	51986931	8553170	7	130,50,145,69,80,61,255,	0,215,377,624,1592,1834,1979,
#Partially deleted in new
chr3	51987056	51989160	chr3:51987056-51989160	0	+	51987056	51987056	8553170	6	140,145,69,80,61,250,	0,252,499,1467,1709,1854,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	51987229	51988819	chr3:51987229-51988819	0	+	51987229	51987229	8553170	2	224,1264,	0,326,
#Partially deleted in new
chr3	51987330	51989160	chr3:51987330-51989160	0	+	51987330	51987330	8553170	4	294,80,61,250,	0,1193,1435,1580,
#Partially deleted in new
chr3	51987430	51989143	chr3:51987430-51989143	0	+	51987430	51988786	789624	4	23,69,61,233,	0,125,1335,1480,
#Deleted in new
chr3	51988301	51989197	chr3:51988301-51989197	0	+	51988301	51988301	8553170	2	525,287,	0,609,
#Deleted in new
chr3	51988472	51989174	chr3:51988472-51989174	0	+	51988472	51988472	8553170	3	131,61,264,	0,293,438,
#Deleted in new
chr3	51993521	51995857	chr3:51993521-51995857	1	-	51993748	51995678	8553170	4	605,65,45,195,	0,1520,1903,2141,
#Deleted in new
chr3	51993599	51995942	chr3:51993599-51995942	3	-	51993748	51995461	0	4	527,65,45,86,	0,1442,1825,2257,
#Deleted in new
chr3	51993627	51995863	chr3:51993627-51995863	1	-	51993748	51995461	0	4	499,65,45,133,	0,1414,1797,2103,
#Deleted in new
chr3	51993627	51995881	chr3:51993627-51995881	0	-	51994845	51995461	789624	5	499,85,65,45,25,	0,1145,1414,1797,2229,
#Deleted in new
chr3	51993628	51995830	chr3:51993628-51995830	1	-	51993748	51995461	0	4	498,65,45,62,	0,1413,1796,2140,
#Deleted in new
chr3	51993628	51995844	chr3:51993628-51995844	1	-	51993748	51995461	0	4	498,65,45,105,	0,1413,1796,2111,
#Deleted in new
chr3	51993722	51995815	chr3:51993722-51995815	1	-	51993748	51995461	0	4	404,65,45,37,	0,1319,1702,2056,
#Deleted in new
chr3	51993749	51995814	chr3:51993749-51995814	0	-	51993749	51995461	0	4	377,65,45,50,	0,1292,1675,2015,
#Deleted in new
chr3	51994296	51995881	chr3:51994296-51995881	1	-	51994960	51995461	789624	3	810,45,25,	0,1128,1560,
#Deleted in new
chr3	51994934	51995895	chr3:51994934-51995895	0	-	51994934	51994934	8553170	2	535,39,	0,922,
#Deleted in new
chr3	52046762	52048657	chr3:52046762-52048657	3	+	52046762	52046762	8553170	3	37,52,839,	0,508,1056,
#Deleted in new
chr3	52048918	52056550	chr3:52048918-52056550	3	-	52050814	52056366	0	3	2204,435,701,	0,5021,6931,
#Deleted in new
chr3	52051631	52056165	chr3:52051631-52056165	0	-	52053862	52056165	789624	2	2743,316,	0,4218,
#Partially deleted in new
chr3	52075252	52154412	chr3:52075252-52154412	3	-	52075886	52154372	789624	11	733,144,99,69,134,116,108,180,172,85,58,	0,21316,47126,49860,62916,70593,71735,73957,74563,75763,79102,
#Partially deleted in new
chr3	52075285	52154690	chr3:52075285-52154690	1	-	52075886	52154372	789624	10	700,99,69,134,116,108,180,172,85,336,	0,47093,49827,62883,70560,71702,73924,74530,75730,79069,
#Partially deleted in new
chr3	52075453	52154404	chr3:52075453-52154404	1	-	52075886	52149976	789624	11	532,144,99,69,134,116,108,180,172,156,50,	0,21115,46925,49659,62715,70392,71534,73756,74362,75562,78901,
#Partially deleted in new
chr3	52193169	52194785	chr3:52193169-52194785	7	+	52193169	52193169	16724991	3	502,262,314,	0,913,1302,
#Partially deleted in new
chr3	52198085	52214180	chr3:52198085-52214180	1	+	52199241	52214180	789624	11	170,231,228,150,223,185,180,165,269,163,161,	0,1124,4421,5777,6607,7753,8486,9997,13197,14172,15934,
#Partially deleted in new
chr3	52198093	52214327	chr3:52198093-52214327	3	+	52199241	52214180	789624	12	162,177,220,228,150,223,185,180,165,269,163,308,	0,578,1127,4413,5769,6599,7745,8478,9989,13189,14164,15926,
#Partially deleted in new
chr3	52198131	52214324	chr3:52198131-52214324	1	+	52199241	52214180	789624	11	124,220,228,150,223,185,180,165,269,163,305,	0,1089,4375,5731,6561,7707,8440,9951,13151,14126,15888,
#Partially deleted in new
chr3	52198143	52214292	chr3:52198143-52214292	1	+	52199241	52214180	789624	12	112,177,231,228,150,223,185,180,165,269,163,273,	0,528,1066,4363,5719,6549,7695,8428,9939,13139,14114,15876,
#Partially deleted in new
chr3	52206631	52214225	chr3:52206631-52214225	0	+	52206631	52214180	789624	4	120,269,163,206,	0,4651,5626,7388,
#Deleted in new
chr3	52211451	52212507	chr3:52211451-52212507	0	+	52211451	52212507	789624	2	100,250,	0,806,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	52217015	52219012	chr3:52217015-52219012	3	-	52217015	52217015	8553170	1	1997,	0,
#Partially deleted in new
chr3	52221079	52226163	chr3:52221079-52226163	3	-	52221216	52225529	789624	2	3233,637,	0,4447,
#Partially deleted in new
chr3	52221080	52231190	chr3:52221080-52231190	3	-	52221216	52231190	789624	5	3232,122,151,126,64,	0,8580,8839,9789,10046,
#Partially deleted in new
chr3	52223919	52229773	chr3:52223919-52229773	0	-	52225581	52229773	789624	3	348,109,113,	0,1607,5741,
#Partially deleted in new
chr3	52228609	52239260	chr3:52228609-52239260	3	-	52229033	52239016	0	9	592,122,151,126,105,96,179,78,269,	0,1051,1310,2260,2517,2834,3334,6419,10382,
#Partially deleted in new
chr3	52228647	52239142	chr3:52228647-52239142	1	-	52229196	52239016	789624	8	554,151,126,105,96,179,78,151,	0,1272,2222,2479,2796,3296,6381,10344,
#Deleted in new
chr3	52230897	52232228	chr3:52230897-52232228	0	-	52230897	52230897	8553170	4	98,105,96,285,	0,229,546,1046,
#Partially deleted in new
chr3	52239257	52241097	chr3:52239257-52241097	3	+	52239257	52239257	789624	2	178,923,	0,917,
#Partially deleted in new
chr3	52239299	52241097	chr3:52239299-52241097	0	+	52239299	52239299	8553170	2	136,920,	0,878,
#Deleted in new
chr3	52245792	52250595	chr3:52245792-52250595	3	+	52245824	52249814	789624	10	256,118,255,113,85,119,64,108,149,926,	0,902,1181,1889,2360,2542,2844,3163,3381,3877,
#Deleted in new
chr3	52245885	52249063	chr3:52245885-52249063	0	+	52245885	52249063	789624	7	163,118,113,85,119,64,108,	0,809,1796,2267,2449,2751,3070,
#Deleted in new
chr3	52245897	52250595	chr3:52245897-52250595	0	+	52245897	52245897	8553170	8	151,118,255,113,301,108,149,926,	0,797,1076,1784,2255,3058,3276,3772,
#Deleted in new
chr3	52246169	52250595	chr3:52246169-52250595	1	+	52247114	52249383	789624	9	145,118,255,113,85,119,64,108,1422,	0,525,804,1512,1983,2165,2467,2786,3004,
#Deleted in new
chr3	52246208	52250597	chr3:52246208-52250597	1	+	52247720	52249814	789624	9	106,118,113,85,119,64,108,149,928,	0,486,1473,1944,2126,2428,2747,2965,3461,
#Deleted in new
chr3	52246445	52250597	chr3:52246445-52250597	0	+	52246445	52246445	8553170	8	367,255,113,301,64,108,149,928,	0,528,1236,1707,2191,2510,2728,3224,
#Deleted in new
chr3	52247326	52248244	chr3:52247326-52248244	0	+	52247326	52247326	8553170	2	468,92,	0,826,
#Deleted in new
chr3	52248425	52250595	chr3:52248425-52250595	0	+	52248425	52248425	8553170	4	275,108,149,926,	0,530,748,1244,
#Deleted in new
chr3	52248960	52249790	chr3:52248960-52249790	0	+	52248960	52249756	789624	3	103,149,146,	0,213,684,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	52254420	52278643	chr3:52254420-52278643	3	-	52257489	52278361	789624	9	3099,143,70,156,117,100,67,98,443,	0,4115,4776,5296,5964,6959,12531,16291,23780,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	52254959	52268138	chr3:52254959-52268138	0	-	52254959	52254959	8553170	7	2560,143,70,156,117,100,1187,	0,3576,4237,4757,5425,6420,11992,
#Partially deleted in new
chr3	52259849	52278321	chr3:52259849-52278321	0	-	52259849	52261463	789624	6	23,117,100,67,98,182,	0,535,1530,7102,10862,18290,
#Partially deleted in new
chr3	52260444	52288020	chr3:52260444-52288020	0	-	52260444	52261463	789624	6	57,100,67,98,64,188,	0,935,6507,10267,24083,27388,
#Deleted in new
chr3	52268277	52268361	chr3:52268277-52268361	3	-	52268277	52268277	5263520	1	84,	0,
#Partially deleted in new
chr3	52287088	52293166	chr3:52287088-52293166	1	+	52287093	52293134	789624	5	130,152,176,310,121,	0,3871,4658,5171,5957,
#Partially deleted in new
chr3	52287819	52293005	chr3:52287819-52293005	1	+	52290342	52292435	789624	4	57,416,152,746,	0,2484,3140,4440,
#Partially deleted in new
chr3	52287819	52293469	chr3:52287819-52293469	1	+	52290342	52293134	789624	5	57,416,152,147,163,	0,2484,3140,5226,5487,
#Partially deleted in new
chr3	52287819	52293475	chr3:52287819-52293475	0	+	52290342	52291854	789624	5	57,416,152,178,1216,	0,2484,3140,3925,4440,
#Partially deleted in new
chr3	52287834	52293471	chr3:52287834-52293471	1	+	52290963	52293134	789624	6	42,152,176,310,147,165,	0,3125,3912,4425,5211,5472,
#Partially deleted in new
chr3	52287855	52293476	chr3:52287855-52293476	3	+	52290342	52293126	789624	5	21,416,152,176,1217,	0,2448,3104,3891,4404,
#Deleted in new
chr3	52288579	52289276	chr3:52288579-52289276	0	-	52288579	52288579	8553170	1	697,	0,
#Deleted in new
chr3	52288582	52299024	chr3:52288582-52299024	3	-	52288582	52288582	8553170	3	142,135,168,	0,4444,10274,
#Deleted in new
chr3	52290073	52292482	chr3:52290073-52292482	0	+	52290073	52290073	8553170	3	646,152,223,	0,886,2186,
#Deleted in new
chr3	52290313	52293005	chr3:52290313-52293005	1	+	52290342	52292435	789624	3	406,152,746,	0,646,1946,
#Deleted in new
chr3	52290683	52293475	chr3:52290683-52293475	0	+	52290683	52290683	8553170	4	36,963,915,169,	0,276,1576,2623,
#Deleted in new
chr3	52292729	52299067	chr3:52292729-52299067	0	-	52292729	52292729	8553170	2	432,211,	0,6127,
#Deleted in new
chr3	52294218	52294308	chr3:52294218-52294308	3	-	52294218	52294218	5263520	1	90,	0,
#Deleted in new
chr3	52296656	52298914	chr3:52296656-52298914	1	-	52296656	52296656	8553170	2	51,58,	0,2200,
#Partially deleted in new
chr3	52316318	52400491	chr3:52316318-52400491	3	+	52322442	52400446	789624	78	227,367,73,175,157,133,162,253,158,212,299,151,194,226,120,83,142,156,199,254,213,165,122,106,180,141,164,114,189,106,114,150,87,187,92,155,178,195,120,159,108,141,161,158,174,39,179,231,197,136,209,172,192,111,186,192,168,192,132,126,120,150,161,226,196,152,197,145,159,132,171,180,177,171,131,352,235,167,	0,6090,7489,9821,10416,11563,14829,15823,28171,29176,30153,31505,32569,32876,33670,34189,35643,36233,36784,37061,38524,40295,41295,41579,42239,42927,43597,43992,44845,45342,46069,46676,48319,48514,50138,50414,52422,53506,53791,54158,54399,55627,55908,56577,58921,59636,62283,63586,65321,66001,67067,67541,68467,69018,69841,70343,71848,72099,72487,73142,74616,74860,75124,76145,76511,77015,78146,78596,78989,79228,80049,80299,80549,81388,81713,82531,83226,84006,
#Partially deleted in new
chr3	52316318	52400491	chr3:52316318-52400491	0	+	52316318	52316318	8553170	77	227,367,73,175,157,133,162,253,158,212,299,151,194,226,120,83,142,156,199,254,213,165,122,106,180,141,164,114,189,106,114,150,87,187,92,155,178,195,120,159,108,141,161,158,174,39,179,231,197,136,209,172,192,111,186,192,168,520,126,120,150,161,226,196,152,197,145,159,132,171,180,177,171,131,352,235,167,	0,6090,7489,9821,10416,11563,14829,15823,28171,29176,30153,31505,32569,32876,33670,34189,35643,36233,36784,37061,38524,40295,41295,41579,42239,42927,43597,43992,44845,45342,46069,46676,48319,48514,50138,50414,52422,53506,53791,54158,54399,55627,55908,56577,58921,59636,62283,63586,65321,66001,67067,67541,68467,69018,69841,70343,71848,72099,73142,74616,74860,75124,76145,76511,77015,78146,78596,78989,79228,80049,80299,80549,81388,81713,82531,83226,84006,
#Partially deleted in new
chr3	52317870	52353821	chr3:52317870-52353821	0	+	52317870	52317870	8553170	21	33,98,367,73,175,157,133,162,253,158,212,299,151,194,226,120,83,142,156,199,442,	0,3777,4538,5937,8269,8864,10011,13277,14271,26619,27624,28601,29953,31017,31324,32118,32637,34091,34681,35232,35509,
#Deleted in new
chr3	52361218	52362476	chr3:52361218-52362476	0	+	52361218	52361218	8553170	2	134,89,	0,1169,
#Deleted in new
chr3	52373651	52374882	chr3:52373651-52374882	7	+	52373651	52373651	16724991	1	1231,	0,
#Partially deleted in new
chr3	52384873	52400487	chr3:52384873-52400487	0	+	52384873	52384873	8553170	25	104,111,186,192,168,520,126,120,150,161,226,196,152,197,145,159,132,171,180,177,171,131,352,159,163,	0,463,1286,1788,3293,3544,4587,6061,6305,6569,7590,7956,8460,9591,10041,10434,10673,11494,11744,11994,12833,13158,13976,14747,15451,
#Partially deleted in new
chr3	52388546	52400487	chr3:52388546-52400487	0	+	52388546	52398978	789624	20	63,132,126,120,150,161,226,196,152,197,145,159,132,171,180,177,171,352,235,163,	0,259,914,2388,2632,2896,3917,4283,4787,5918,6368,6761,7000,7821,8071,8321,9160,10303,10998,11778,
#Partially deleted in new
chr3	52388882	52392556	chr3:52388882-52392556	0	+	52388882	52392556	789624	5	55,120,150,161,93,	0,2052,2296,2560,3581,
#Deleted in new
chr3	52394596	52395409	chr3:52394596-52395409	0	+	52394596	52394596	8553170	2	463,102,	0,711,
#Deleted in new
chr3	52401012	52410350	chr3:52401012-52410350	3	-	52402287	52409878	789624	17	1409,73,93,161,479,134,185,148,124,79,143,62,120,133,55,30,509,	0,1589,1766,2125,2403,3440,4097,4752,5240,5816,6161,6386,6945,7461,8541,8701,8829,
#Deleted in new
chr3	52401022	52404477	chr3:52401022-52404477	0	-	52402287	52404477	789624	5	1399,73,63,94,25,	0,1579,1756,2778,3430,
#Deleted in new
chr3	52401025	52409914	chr3:52401025-52409914	1	-	52402287	52409878	789624	17	1396,73,93,161,479,134,185,148,70,79,143,62,120,133,55,30,73,	0,1576,1753,2112,2390,3427,4084,4739,5227,5803,6148,6373,6932,7448,8528,8688,8816,
#Deleted in new
chr3	52401672	52402161	chr3:52401672-52402161	1	-	52401672	52402161	789624	1	489,	0,
#Deleted in new
chr3	52401815	52403647	chr3:52401815-52403647	0	-	52402287	52403647	789624	5	606,73,162,161,232,	0,786,963,1322,1600,
#Deleted in new
chr3	52402023	52403551	chr3:52402023-52403551	0	-	52402023	52402023	8553170	4	398,73,520,136,	0,578,755,1392,
#Deleted in new
chr3	52403702	52405653	chr3:52403702-52405653	0	-	52403702	52403702	8553170	3	192,134,544,	0,750,1407,
#Deleted in new
chr3	52405810	52408047	chr3:52405810-52408047	0	-	52405810	52405810	8553170	5	102,655,143,62,90,	0,442,1363,1588,2147,
#Deleted in new
chr3	52406645	52409878	chr3:52406645-52409878	0	-	52406645	52406645	8553170	7	262,62,120,133,55,30,37,	0,753,1312,1828,2908,3068,3196,
#Deleted in new
chr3	52407172	52409951	chr3:52407172-52409951	0	-	52408073	52409878	789624	6	144,62,120,55,30,110,	0,226,785,2381,2541,2669,
#Deleted in new
chr3	52407178	52409783	chr3:52407178-52409783	0	-	52407178	52408491	789624	6	138,62,120,133,55,70,	0,220,779,1295,2375,2535,
#Partially deleted in new
chr3	52410656	52423641	chr3:52410656-52423641	3	+	52412879	52423317	789624	11	591,110,53,92,102,125,160,107,117,122,551,	0,2154,3339,3839,9176,9654,10246,10991,11565,12103,12434,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	52410889	52414844	chr3:52410889-52414844	0	+	52410889	52410889	8553170	4	450,110,53,349,	0,1921,3106,3606,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	52411035	52414836	chr3:52411035-52414836	0	+	52411035	52411035	8553170	5	212,110,53,92,109,	0,1775,2960,3460,3692,
#Partially deleted in new
chr3	52411196	52423640	chr3:52411196-52423640	1	+	52412879	52423317	789624	10	51,110,53,92,102,125,160,107,122,550,	0,1614,2799,3299,8636,9114,9706,10451,11563,11894,
#Partially deleted in new
chr3	52412810	52423640	chr3:52412810-52423640	1	+	52412879	52423317	789624	9	110,53,92,102,125,160,107,122,550,	0,1185,1685,7022,7500,8092,8837,9949,10280,
#Partially deleted in new
chr3	52412853	52420995	chr3:52412853-52420995	0	+	52412853	52412853	8553170	4	67,102,125,93,	0,6979,7457,8049,
#Partially deleted in new
chr3	52412900	52423640	chr3:52412900-52423640	1	+	52414505	52422828	789624	12	20,53,13,78,45,56,125,160,58,48,122,550,	0,1095,1595,1609,6932,6978,7410,8002,8747,8806,9859,10190,
#Partially deleted in new
chr3	52414522	52423640	chr3:52414522-52423640	0	+	52414522	52423317	789624	8	65,102,125,160,107,117,77,550,	0,5310,5788,6380,7125,7699,8237,8568,
#Deleted in new
chr3	52419919	52423283	chr3:52419919-52423283	0	+	52419919	52419919	8553170	5	15,125,160,1234,193,	0,391,983,1728,3171,
#Deleted in new
chr3	52420991	52423406	chr3:52420991-52423406	0	+	52420991	52423103	789624	3	71,107,316,	0,656,2099,
#Deleted in new
chr3	52421015	52422857	chr3:52421015-52422857	0	+	52421015	52421015	8553170	3	47,107,636,	0,632,1206,
#Deleted in new
chr3	52433052	52445027	chr3:52433052-52445027	3	-	52435602	52445027	789624	16	3021,140,229,42,92,232,145,70,115,146,117,91,120,63,161,115,	0,4474,4918,5867,6627,6814,7324,7701,7881,8211,8521,8766,9132,9506,9694,11860,
#Deleted in new
chr3	52440389	52444969	chr3:52440389-52444969	0	-	52441659	52444969	789624	8	132,70,115,146,117,91,120,57,	0,364,544,874,1184,1429,1795,4523,
#Deleted in new
chr3	52441864	52445085	chr3:52441864-52445085	0	-	52441864	52445027	789624	6	45,120,63,161,54,173,	0,320,694,882,1151,3048,
#Deleted in new
chr3	52451101	52454070	chr3:52451101-52454070	3	-	52451274	52454015	0	6	205,137,115,147,31,79,	0,289,642,1004,1381,2890,
#Deleted in new
chr3	52451414	52452834	chr3:52451414-52452834	0	-	52451414	52452175	789624	4	113,115,147,352,	0,329,691,1068,
#Deleted in new
chr3	52451438	52451991	chr3:52451438-52451991	0	-	52451438	52451438	8553170	2	89,248,	0,305,
#Partially deleted in new
chr3	52455117	52493068	chr3:52455117-52493068	3	+	52455641	52492482	0	22	36,129,84,183,49,164,96,96,153,69,186,129,114,112,125,50,1410,343,157,129,162,1197,	0,488,2725,3544,15741,16696,17185,18616,21329,22456,22979,23331,24631,25066,29395,30660,32078,34218,34957,35587,36234,36754,
#Partially deleted in new
chr3	52455507	52493071	chr3:52455507-52493071	1	+	52455641	52492482	0	21	227,84,183,49,164,96,96,153,69,186,129,114,112,125,50,1410,343,157,129,162,1200,	0,2335,3154,15351,16306,16795,18226,20939,22066,22589,22941,24241,24676,29005,30270,31688,33828,34567,35197,35844,36364,
#Partially deleted in new
chr3	52455616	52481914	chr3:52455616-52481914	1	+	52455641	52480898	0	14	118,84,183,49,164,96,96,153,69,186,129,114,112,1036,	0,2226,3045,15242,16197,16686,18117,20830,21957,22480,22832,24132,24567,25262,
#Partially deleted in new
chr3	52455616	52481910	chr3:52455616-52481910	1	+	52455641	52480519	789624	13	118,84,183,49,164,96,96,153,69,186,129,114,1727,	0,2226,3045,15242,16197,16686,18117,20830,21957,22480,22832,24132,24567,
#Partially deleted in new
chr3	52458691	52493068	chr3:52458691-52493068	0	+	52458691	52458691	8553170	18	153,49,164,96,96,153,709,129,114,112,159,125,50,1410,343,129,162,1197,	0,12167,13122,13611,15042,17755,18882,19757,21057,21492,22187,25821,27086,28504,30644,32013,32660,33180,
#Deleted in new
chr3	52470555	52472373	chr3:52470555-52472373	0	+	52470555	52470555	8553170	5	108,49,198,164,71,	0,303,735,1258,1747,
#Partially deleted in new
chr3	52470555	52476492	chr3:52470555-52476492	0	+	52470555	52470555	8553170	6	108,49,164,96,96,46,	0,303,1258,1747,3178,5891,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	52475615	52478583	chr3:52475615-52478583	0	+	52475615	52475615	8553170	5	290,153,69,186,135,	0,831,1958,2481,2833,
#Partially deleted in new
chr3	52476297	52478282	chr3:52476297-52478282	0	+	52476297	52476297	8553170	3	302,69,186,	0,1276,1799,
#Deleted in new
chr3	52478220	52480276	chr3:52478220-52480276	0	+	52478220	52478220	8553170	3	357,114,93,	0,1528,1963,
#Deleted in new
chr3	52480138	52485827	chr3:52480138-52485827	0	+	52480138	52480138	8553170	4	157,231,125,50,	0,740,4374,5639,
#Partially deleted in new
chr3	52484203	52487276	chr3:52484203-52487276	0	+	52484203	52484203	8553170	3	434,50,81,	0,1574,2992,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	52485784	52487653	chr3:52485784-52487653	0	+	52485784	52485784	8553170	3	43,83,458,	0,685,1411,
#Deleted in new
chr3	52489572	52491577	chr3:52489572-52491577	0	+	52489572	52489572	8553170	3	659,129,226,	0,1132,1779,
#Partially deleted in new
chr3	52495337	52524495	chr3:52495337-52524495	3	+	52495413	52524356	789624	69	154,137,116,86,70,96,111,197,131,128,89,138,141,63,114,54,81,159,63,96,87,112,187,94,159,96,96,48,131,112,78,99,99,132,129,57,84,196,96,46,77,126,74,75,123,48,78,147,141,60,177,87,150,57,202,150,105,108,194,145,134,166,110,120,150,105,147,114,196,	0,5828,6300,6668,6821,7294,7661,8006,8434,8690,9123,9401,9665,9981,10330,10545,10832,11354,12275,12593,12935,13872,14532,14804,15011,16312,17003,17258,17490,17792,18379,18545,18777,19027,19363,19651,20085,20705,21018,21204,21354,21646,21982,22212,22543,22974,23198,23385,23926,24167,24606,24866,25062,25304,25466,26023,26258,26506,26699,26992,27217,27437,27687,27884,28089,28314,28533,28762,28962,
#Partially deleted in new
chr3	52495358	52508543	chr3:52495358-52508543	0	+	52495358	52495358	8553170	21	133,137,116,86,70,96,111,197,131,128,89,138,141,63,114,54,81,159,63,96,271,	0,5807,6279,6647,6800,7273,7640,7985,8413,8669,9102,9380,9644,9960,10309,10524,10811,11333,12254,12572,12914,
#Partially deleted in new
chr3	52495368	52501630	chr3:52495368-52501630	0	+	52495368	52495368	8553170	2	123,465,	0,5797,
#Partially deleted in new
chr3	52507960	52509476	chr3:52507960-52509476	0	+	52507960	52507960	8553170	3	66,87,267,	0,312,1249,
#Deleted in new
chr3	52516177	52520246	chr3:52516177-52520246	0	+	52516177	52516177	8553170	10	274,46,408,74,75,733,147,141,616,43,	0,364,524,1142,1372,1703,2545,3086,3327,4026,
#Deleted in new
chr3	52518800	52523476	chr3:52518800-52523476	0	+	52518800	52518800	8553170	15	69,301,347,150,364,150,105,108,194,145,134,166,110,120,50,	0,463,1143,1599,1841,2560,2795,3043,3236,3529,3754,3974,4224,4421,4626,
#Deleted in new
chr3	52521360	52524493	chr3:52521360-52524493	0	+	52521360	52521360	8553170	12	150,356,194,145,134,166,110,120,330,147,114,194,	0,235,676,969,1194,1414,1664,1861,2066,2510,2739,2939,
#Deleted in new
chr3	52521567	52523323	chr3:52521567-52523323	0	+	52521567	52521567	8553170	4	1121,166,110,102,	0,1207,1457,1654,
#Deleted in new
chr3	52523277	52524495	chr3:52523277-52524495	0	+	52523277	52524356	789624	5	64,150,147,114,196,	0,149,593,822,1022,
#Partially deleted in new
chr3	52524384	52527684	chr3:52524384-52527684	0	-	52524469	52527684	789624	6	227,65,141,87,82,68,	0,432,578,824,2909,3232,
#Partially deleted in new
chr3	52524386	52535054	chr3:52524386-52535054	3	-	52524469	52534653	789624	14	345,65,141,87,82,102,103,61,129,94,56,75,185,522,	0,430,576,822,2907,3230,3442,3626,3796,4059,4250,4474,4763,10146,
#Deleted in new
chr3	52524386	52526491	chr3:52524386-52526491	0	-	52524386	52524386	8553170	4	225,65,141,1283,	0,430,576,822,
#Partially deleted in new
chr3	52524388	52533777	chr3:52524388-52533777	1	-	52524469	52533737	789624	14	343,65,141,87,82,102,103,61,129,94,56,75,185,272,	0,428,574,820,2905,3228,3440,3624,3794,4057,4248,4472,4761,9117,
#Deleted in new
chr3	52524400	52526290	chr3:52524400-52526290	0	-	52524400	52524400	8553170	4	331,65,141,1082,	0,416,562,808,
#Partially deleted in new
chr3	52524469	52533777	chr3:52524469-52533777	1	-	52524469	52533737	789624	13	262,65,141,87,82,102,103,61,129,94,56,185,272,	0,347,493,739,2824,3147,3359,3543,3713,3976,4167,4680,9036,
#Partially deleted in new
chr3	52524469	52535006	chr3:52524469-52535006	0	-	52529301	52534653	789624	13	262,65,141,87,82,102,103,61,129,56,75,185,656,	0,347,493,739,2824,3147,3359,3543,3713,4167,4391,4680,9881,
#Deleted in new
chr3	52524522	52525060	chr3:52524522-52525060	0	-	52524522	52524522	8553170	2	209,244,	0,294,
#Partially deleted in new
chr3	52524612	52527768	chr3:52524612-52527768	0	-	52524612	52524612	8553170	5	119,65,141,87,475,	0,204,350,596,2681,
#Partially deleted in new
chr3	52525059	52528074	chr3:52525059-52528074	0	-	52525059	52525059	8553170	5	44,87,82,315,62,	0,149,2234,2557,2953,
#Deleted in new
chr3	52527293	52533531	chr3:52527293-52533531	0	-	52527293	52533531	789624	9	82,102,103,61,129,28,56,185,26,	0,323,535,719,889,1218,1343,1856,6212,
#Deleted in new
chr3	52528006	52528765	chr3:52528006-52528765	0	-	52528006	52528006	8553170	4	67,129,94,129,	0,176,439,630,
#Deleted in new
chr3	52528020	52529944	chr3:52528020-52529944	0	-	52528020	52528683	789624	7	53,129,28,56,75,185,56,	0,162,491,616,840,1129,1868,
#Deleted in new
chr3	52528191	52534309	chr3:52528191-52534309	0	-	52528191	52528191	8553170	5	120,56,75,185,100,	0,445,669,958,6018,
#Deleted in new
chr3	52528912	52532514	chr3:52528912-52532514	0	-	52528912	52528912	8553170	3	23,185,352,	0,237,3250,
#Partially deleted in new
chr3	52534012	52540526	chr3:52534012-52540526	0	+	52534012	52534012	8553170	3	136,75,103,	0,790,6411,
#Partially deleted in new
chr3	52534524	52540526	chr3:52534524-52540526	0	+	52534524	52534524	8553170	2	353,103,	0,5899,
#Partially deleted in new
chr3	52536601	52540525	chr3:52536601-52540525	1	+	52536755	52540519	789624	2	172,102,	0,3822,
#Partially deleted in new
chr3	52536604	52579237	chr3:52536604-52579237	1	+	52536755	52579046	789624	2	302,220,	0,42413,
#Partially deleted in new
chr3	52536604	52541891	chr3:52536604-52541891	3	+	52536755	52540485	789624	2	302,1468,	0,3819,
#Partially deleted in new
chr3	52545351	52679714	chr3:52545351-52679714	1	-	52548062	52679711	0	28	2884,217,71,156,202,211,184,158,146,264,158,186,212,643,106,277,98,142,214,92,86,99,69,117,144,148,98,141,	0,5069,5395,9372,16415,17931,18698,31189,33702,41073,42001,43718,58169,63961,69999,71910,81921,83542,89250,96602,99352,102992,106390,112847,116781,123146,133148,134222,
#Partially deleted in new
chr3	52547840	52685836	chr3:52547840-52685836	3	-	52548062	52679711	0	30	395,217,71,156,202,130,184,158,146,264,83,186,212,643,106,277,98,142,214,92,96,86,99,69,117,144,148,98,150,88,	0,2580,2906,6883,13926,15523,16209,28700,31213,38584,39512,41229,55680,61472,67510,69421,79432,81053,86761,94113,95407,96863,100503,103901,110358,114292,120657,130659,131733,137908,
#Partially deleted in new
chr3	52547989	52679713	chr3:52547989-52679713	1	-	52548062	52679711	0	30	246,217,71,156,165,202,211,184,158,146,264,158,186,212,643,106,277,98,142,214,92,96,86,99,69,117,144,148,98,140,	0,2431,2757,6734,10259,13777,15293,16060,28551,31064,38435,39363,41080,55531,61323,67361,69272,79283,80904,86612,93964,95258,96714,100354,103752,110209,114143,120508,130510,131584,
#Partially deleted in new
chr3	52547989	52679714	chr3:52547989-52679714	1	-	52548062	52679711	0	28	246,217,71,202,211,184,158,146,264,158,186,212,643,106,277,98,142,214,92,96,86,99,69,117,144,148,98,141,	0,2431,2757,13777,15293,16060,28551,31064,38435,39363,41080,55531,61323,67361,69272,79283,80904,86612,93964,95258,96714,100354,103752,110209,114143,120508,130510,131584,
#Partially deleted in new
chr3	52547989	52679714	chr3:52547989-52679714	0	-	52589248	52679711	0	28	246,217,71,156,202,211,184,158,146,264,158,183,643,106,277,98,142,214,92,96,86,99,69,117,144,148,98,141,	0,2431,2757,6734,13777,15293,16060,28551,31064,38435,39363,41080,61323,67361,69272,79283,80904,86612,93964,95258,96714,100354,103752,110209,114143,120508,130510,131584,
#Partially deleted in new
chr3	52547990	52679714	chr3:52547990-52679714	1	-	52548062	52679711	0	29	245,217,71,156,202,211,184,158,146,264,158,186,212,643,106,277,98,142,214,92,96,86,99,69,117,144,148,98,141,	0,2430,2756,6733,13776,15292,16059,28550,31063,38434,39362,41079,55530,61322,67360,69271,79282,80903,86611,93963,95257,96713,100353,103751,110208,114142,120507,130509,131583,
#Partially deleted in new
chr3	52547990	52679714	chr3:52547990-52679714	1	-	52548062	52679711	0	29	245,217,71,156,202,211,184,158,146,264,83,186,212,643,106,277,98,142,214,92,96,86,99,69,117,144,148,98,141,	0,2430,2756,6733,13776,15292,16059,28550,31063,38434,39362,41079,55530,61322,67360,69271,79282,80903,86611,93963,95257,96713,100353,103751,110208,114142,120507,130509,131583,
#Partially deleted in new
chr3	52548009	52679714	chr3:52548009-52679714	1	-	52548062	52679711	0	30	226,217,71,165,202,211,184,158,146,264,158,186,212,643,106,277,45,98,142,214,92,96,86,99,69,117,144,148,98,141,	0,2411,2737,10239,13757,15273,16040,28531,31044,38415,39343,41060,55511,61303,67341,69252,76887,79263,80884,86592,93944,95238,96694,100334,103732,110189,114123,120488,130490,131564,
#Partially deleted in new
chr3	52548010	52679714	chr3:52548010-52679714	1	-	52548062	52679711	0	29	225,217,71,202,211,184,158,146,264,158,186,212,643,106,277,45,98,142,214,92,96,86,99,69,117,144,148,98,141,	0,2410,2736,13756,15272,16039,28530,31043,38414,39342,41059,55510,61302,67340,69251,76886,79262,80883,86591,93943,95237,96693,100333,103731,110188,114122,120487,130489,131563,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	52551845	52551943	chr3:52551845-52551943	3	-	52551845	52551845	8553170	1	98,	0,
#Partially deleted in new
chr3	52554782	52679714	chr3:52554782-52679714	0	-	52554782	52679711	789624	26	97,202,211,184,158,146,264,158,183,212,643,106,277,98,142,214,92,96,86,99,69,117,144,148,98,141,	0,6984,8500,9267,21758,24271,31642,32570,34287,48738,54530,60568,62479,72490,74111,79819,87171,88465,89921,93561,96959,103416,107350,113715,123717,124791,
#Deleted in new
chr3	52560569	52560707	chr3:52560569-52560707	3	+	52560569	52560569	8553170	1	138,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	52585472	52609461	chr3:52585472-52609461	0	-	52585472	52585472	8553170	5	1216,158,186,212,149,	0,1880,3597,18048,23840,
#Partially deleted in new
chr3	52586429	52678567	chr3:52586429-52678567	0	-	52586429	52678567	789624	20	259,158,183,212,643,106,277,45,98,142,214,92,96,86,99,69,117,144,148,68,	0,923,2640,17091,22883,28921,30832,38467,40843,42464,48172,55524,56818,58274,61914,65312,71769,75703,82068,92070,
#Partially deleted in new
chr3	52609085	52615399	chr3:52609085-52615399	0	-	52609085	52609085	8553170	2	870,49,	0,6265,
#Partially deleted in new
chr3	52651763	52685850	chr3:52651763-52685850	0	-	52651763	52679711	789624	7	47,117,144,148,98,153,102,	0,6435,10369,16734,26736,27810,33985,
#Partially deleted in new
chr3	52662203	52685917	chr3:52662203-52685917	0	-	52662203	52679711	789624	6	73,148,98,153,142,169,	0,6294,16296,17370,19888,23545,
#Partially deleted in new
chr3	52668526	52685582	chr3:52668526-52685582	0	-	52668526	52679711	789624	4	119,98,153,147,	0,9973,11047,16909,
#Partially deleted in new
chr3	52668620	52685850	chr3:52668620-52685850	0	-	52668620	52679711	789624	5	25,98,150,142,102,	0,9879,10953,13471,17128,
#Partially deleted in new
chr3	52679581	52685578	chr3:52679581-52685578	0	-	52679581	52679711	789624	4	145,117,142,143,	0,2122,2510,5854,
#Partially deleted in new
chr3	52679582	52685882	chr3:52679582-52685882	0	-	52679582	52679711	789624	4	141,142,59,134,	0,2509,5273,6166,
#Partially deleted in new
chr3	52679633	52685794	chr3:52679633-52685794	0	-	52679633	52679711	789624	5	93,117,142,59,46,	0,2070,2458,5222,6115,
#Partially deleted in new
chr3	52681155	52689105	chr3:52681155-52689105	0	+	52686791	52689105	789624	6	120,59,138,114,84,32,	0,5613,6090,6346,6953,7918,
#Partially deleted in new
chr3	52685919	52694492	chr3:52685919-52694492	3	+	52686092	52694275	789624	15	186,59,138,114,84,133,113,127,88,175,143,137,176,67,300,	0,849,1326,1582,2189,3154,4672,5025,5622,6952,7267,7488,7712,8117,8273,
#Partially deleted in new
chr3	52686004	52689086	chr3:52686004-52689086	0	+	52686004	52686004	8553170	6	101,59,138,114,84,37,	0,764,1241,1497,2104,3045,
#Partially deleted in new
chr3	52686015	52694492	chr3:52686015-52694492	1	+	52686791	52694275	789624	15	187,59,138,114,84,133,113,127,88,175,143,137,176,67,300,	0,753,1230,1486,2093,3058,4576,4929,5526,6856,7171,7392,7616,8021,8177,
#Deleted in new
chr3	52686029	52686955	chr3:52686029-52686955	0	+	52686029	52686029	8553170	2	76,187,	0,739,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	52686031	52687827	chr3:52686031-52687827	0	+	52686031	52686031	8553170	4	74,59,138,326,	0,737,1214,1470,
#Partially deleted in new
chr3	52686031	52690704	chr3:52686031-52690704	0	+	52686092	52688201	789624	7	74,59,138,114,98,133,113,	0,737,1214,1470,2077,3042,4560,
#Partially deleted in new
chr3	52686048	52694459	chr3:52686048-52694459	0	+	52686048	52686048	8553170	14	57,59,138,114,84,133,480,88,175,143,137,176,67,267,	0,720,1197,1453,2060,3025,4543,5493,6823,7138,7359,7583,7988,8144,
#Deleted in new
chr3	52686170	52687616	chr3:52686170-52687616	0	+	52686791	52687616	789624	4	255,59,138,115,	0,598,1075,1331,
#Partially deleted in new
chr3	52686176	52688190	chr3:52686176-52688190	0	+	52686176	52686176	8553170	4	249,138,114,82,	0,1069,1325,1932,
#Deleted in new
chr3	52688881	52688961	chr3:52688881-52688961	3	+	52688881	52688881	8553170	1	80,	0,
#Deleted in new
chr3	52688889	52688962	chr3:52688889-52688962	3	+	52688889	52688889	8553170	1	73,	0,
#Partially deleted in new
chr3	52688924	52692929	chr3:52688924-52692929	0	+	52688924	52688924	8553170	5	282,113,127,88,58,	0,1667,2020,2617,3947,
#Deleted in new
chr3	52689247	52689315	chr3:52689247-52689315	3	+	52689247	52689247	789624	1	68,	0,
#Deleted in new
chr3	52690743	52690827	chr3:52690743-52690827	3	+	52690743	52690743	789624	1	84,	0,
#Deleted in new
chr3	52691377	52691453	chr3:52691377-52691453	3	+	52691377	52691377	8553170	1	76,	0,
#Deleted in new
chr3	52692735	52692812	chr3:52692735-52692812	3	+	52692735	52692735	789624	1	77,	0,
#Deleted in new
chr3	52693169	52693779	chr3:52693169-52693779	0	+	52693169	52693169	8553170	2	375,148,	0,462,
#Partially deleted in new
chr3	52694487	52705786	chr3:52694487-52705786	1	-	52694844	52700460	789624	10	548,113,167,113,85,118,214,99,52,340,	0,702,933,1440,1746,2054,3233,5774,5957,10959,
#Partially deleted in new
chr3	52694488	52705791	chr3:52694488-52705791	3	-	52694844	52700460	789624	11	547,113,167,113,85,118,214,99,52,229,89,	0,701,932,1439,1745,2053,3232,5773,5956,10235,11214,
#Partially deleted in new
chr3	52694491	52703619	chr3:52694491-52703619	1	-	52694844	52700460	789624	10	544,113,167,113,85,118,214,99,52,116,	0,698,929,1436,1742,2050,3229,5770,5953,9012,
#Partially deleted in new
chr3	52694502	52705781	chr3:52694502-52705781	1	-	52694844	52700460	789624	10	533,113,167,113,85,118,214,99,52,83,	0,687,918,1425,1731,2039,3218,5759,5942,11196,
#Deleted in new
chr3	52694671	52696580	chr3:52694671-52696580	0	-	52696007	52696580	789624	5	364,113,167,113,39,	0,518,749,1256,1870,
#Partially deleted in new
chr3	52694801	52705682	chr3:52694801-52705682	0	-	52694801	52694801	8553170	8	234,851,85,118,214,99,52,236,	0,388,1432,1740,2919,5460,5643,10645,
#Deleted in new
chr3	52694898	52697534	chr3:52694898-52697534	0	-	52694898	52694898	8553170	7	137,113,167,113,85,118,30,	0,291,522,1029,1335,1643,2606,
#Deleted in new
chr3	52695239	52696637	chr3:52695239-52696637	0	-	52695239	52695239	8553170	2	801,96,	0,1302,
#Partially deleted in new
chr3	52696196	52700497	chr3:52696196-52700497	0	-	52696196	52696196	8553170	4	463,214,99,53,	0,1524,4065,4248,
#Partially deleted in new
chr3	52696242	52700657	chr3:52696242-52700657	0	-	52696242	52700460	789624	5	76,118,214,99,213,	0,299,1478,4019,4202,
#Partially deleted in new
chr3	52697781	52705840	chr3:52697781-52705840	0	-	52697781	52700460	789624	5	153,99,52,135,138,	0,2480,2663,3427,7921,
#Partially deleted in new
chr3	52697859	52705654	chr3:52697859-52705654	0	-	52697859	52700460	789624	6	75,99,52,130,225,208,	0,2402,2585,5939,6864,7587,
#Partially deleted in new
chr3	52697862	52705764	chr3:52697862-52705764	0	-	52697862	52700460	789624	5	72,99,52,229,318,	0,2399,2582,6861,7584,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	52700284	52705771	chr3:52700284-52705771	0	-	52700284	52700460	789624	4	76,52,169,325,	0,160,2802,5162,
#Deleted in new
chr3	52704812	52706032	chr3:52704812-52706032	0	-	52704812	52704812	8553170	2	140,586,	0,634,
#Partially deleted in new
chr3	52704954	52708157	chr3:52704954-52708157	1	+	52706673	52707812	789624	4	204,60,87,471,	0,1689,1838,2732,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	52705635	52711146	chr3:52705635-52711146	1	+	52706045	52707812	789624	4	647,60,87,3460,	0,1008,1157,2051,
#Partially deleted in new
chr3	52705840	52708179	chr3:52705840-52708179	1	+	52706045	52707812	789624	4	442,60,87,493,	0,803,952,1846,
#Partially deleted in new
chr3	52706077	52708166	chr3:52706077-52708166	3	+	52706246	52707812	789624	4	205,60,87,480,	0,566,715,1609,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	52706108	52707384	chr3:52706108-52707384	0	+	52706108	52706108	8553170	3	174,60,592,	0,535,684,
#Partially deleted in new
chr3	52706142	52708019	chr3:52706142-52708019	0	+	52706142	52706142	8553170	3	561,87,333,	0,650,1544,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	52708448	52770949	chr3:52708448-52770949	3	-	52711776	52770746	789624	16	3421,134,206,89,110,67,150,171,138,405,142,155,108,198,267,296,	0,29137,30980,32962,34903,35790,37612,38285,41243,43483,52346,55021,57438,57729,59889,62205,
#Deleted in new
chr3	52732546	52733867	chr3:52732546-52733867	7	+	52732546	52732546	16724991	1	1321,	0,
#Deleted in new
chr3	52734734	52735013	chr3:52734734-52735013	7	+	52734734	52734734	16724991	1	279,	0,
#Partially deleted in new
chr3	52737497	52770939	chr3:52737497-52770939	1	-	52737534	52770746	789624	14	222,206,89,110,67,150,171,405,142,155,108,198,267,286,	0,1931,3913,5854,6741,8563,9236,14434,23297,25972,28389,28680,30840,33156,
#Partially deleted in new
chr3	52743227	52746114	chr3:52743227-52746114	0	-	52743227	52743227	8553170	3	234,67,54,	0,1011,2833,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	52753525	52754690	chr3:52753525-52754690	7	+	52753525	52753525	16724991	2	364,520,	0,645,
#Partially deleted in new
chr3	52766315	52770946	chr3:52766315-52770946	0	-	52768545	52770746	789624	3	60,229,293,	0,2022,4338,
#Partially deleted in new
chr3	52777591	52792062	chr3:52777591-52792062	3	+	52777615	52791911	789624	22	141,21,167,105,163,114,126,117,169,126,182,186,140,155,15,21,81,114,202,173,112,281,	0,405,748,1350,1840,2677,4348,4559,5365,5622,6704,7452,8703,9353,9596,10000,10394,10640,12061,13157,13925,14190,
#Partially deleted in new
chr3	52777594	52780369	chr3:52777594-52780369	0	+	52777615	52779663	789624	6	138,21,167,105,446,101,	0,402,745,1347,1837,2674,
#Partially deleted in new
chr3	52778506	52792011	chr3:52778506-52792011	0	+	52778506	52778506	8553170	20	160,105,163,114,126,117,169,126,182,186,140,155,15,21,81,114,202,173,112,230,	0,435,925,1762,3433,3644,4450,4707,5789,6537,7788,8438,8681,9085,9479,9725,11146,12242,13010,13275,
#Partially deleted in new
chr3	52779920	52783003	chr3:52779920-52783003	0	+	52779920	52779920	8553170	5	173,114,126,117,47,	0,348,2019,2230,3036,
#Partially deleted in new
chr3	52779920	52792068	chr3:52779920-52792068	1	+	52782201	52791911	789624	18	173,114,126,117,169,126,182,186,140,155,15,21,81,114,202,173,112,287,	0,348,2019,2230,3036,3293,4375,5123,6374,7024,7267,7671,8065,8311,9732,10828,11596,11861,
#Partially deleted in new
chr3	52779925	52783088	chr3:52779925-52783088	0	+	52779925	52779925	8553170	5	59,114,126,117,132,	0,343,2014,2225,3031,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	52780116	52783067	chr3:52780116-52783067	0	+	52780116	52780116	8553170	4	266,126,117,111,	0,1823,2034,2840,
#Partially deleted in new
chr3	52784411	52792033	chr3:52784411-52792033	0	+	52784411	52791911	789624	11	66,186,140,170,21,81,114,202,173,112,252,	0,632,1883,2533,3180,3574,3820,5241,6337,7105,7370,
#Partially deleted in new
chr3	52786944	52789723	chr3:52786944-52789723	0	+	52786944	52788060	789624	6	155,15,21,38,114,71,	0,243,647,1084,1287,2708,
#Partially deleted in new
chr3	52787824	52792060	chr3:52787824-52792060	1	+	52787963	52791911	789624	6	242,114,202,173,112,279,	0,407,1828,2924,3692,3957,
#Partially deleted in new
chr3	52788283	52790422	chr3:52788283-52790422	0	+	52788283	52788283	8553170	2	62,770,	0,1369,
#Deleted in new
chr3	52790633	52792061	chr3:52790633-52792061	0	+	52790633	52790633	8553170	3	288,112,280,	0,883,1148,
#Deleted in new
chr3	52794767	52796041	chr3:52794767-52796041	0	+	52794767	52794767	8553170	2	129,439,	0,835,
#Partially deleted in new
chr3	52794767	52809009	chr3:52794767-52809009	1	+	52794803	52806362	789624	21	129,21,167,105,163,114,126,117,169,126,182,186,140,165,33,36,114,205,170,112,458,	0,835,1713,1971,2337,3049,4198,4604,4985,5770,6197,7566,7899,9087,11040,11335,11525,12133,12979,13342,13784,
#Partially deleted in new
chr3	52794795	52808796	chr3:52794795-52808796	1	+	52794803	52808681	789624	17	101,21,167,105,163,114,126,117,169,126,182,186,30,86,170,112,245,	0,807,1685,1943,2309,3021,4170,4576,4957,5742,6169,7538,7871,12224,12951,13314,13756,
#Partially deleted in new
chr3	52794797	52809009	chr3:52794797-52809009	3	+	52794803	52808681	789624	22	99,21,167,105,163,114,126,117,169,126,182,186,140,155,9,33,36,114,205,170,112,458,	0,805,1683,1941,2307,3019,4168,4574,4955,5740,6167,7536,7869,9057,9928,11010,11305,11495,12103,12949,13312,13754,
#Deleted in new
chr3	52798569	52801063	chr3:52798569-52801063	0	+	52798569	52798569	8553170	6	187,126,117,169,126,99,	0,396,802,1183,1968,2395,
#Deleted in new
chr3	52798611	52799876	chr3:52798611-52799876	0	+	52798611	52798611	8553170	4	162,126,117,124,	0,354,760,1141,
#Partially deleted in new
chr3	52800385	52802416	chr3:52800385-52802416	0	+	52800385	52800385	8553170	3	278,182,83,	0,579,1948,
#Deleted in new
chr3	52802203	52802806	chr3:52802203-52802806	0	+	52802203	52802203	8553170	2	316,140,	0,463,
#Partially deleted in new
chr3	52802501	52804254	chr3:52802501-52804254	0	+	52802501	52802501	8553170	3	18,140,400,	0,165,1353,
#Deleted in new
chr3	52804002	52806938	chr3:52804002-52806938	0	+	52804002	52804002	8553170	4	732,36,114,38,	0,2100,2290,2898,
#Deleted in new
chr3	52804805	52808796	chr3:52804805-52808796	0	+	52804805	52804805	8553170	6	1333,114,205,170,112,245,	0,1487,2095,2941,3304,3746,
#Partially deleted in new
chr3	52812974	52830739	chr3:52812974-52830739	3	-	52813420	52830642	789624	24	516,97,155,175,117,27,75,126,39,51,27,155,140,186,182,126,169,117,129,111,163,105,161,187,	0,1000,1234,3909,5077,5282,5487,6418,6779,6965,7316,7656,8016,10581,10848,11215,11422,11867,12911,13566,13816,14118,16144,17578,
#Partially deleted in new
chr3	52813269	52830673	chr3:52813269-52830673	1	-	52813420	52830642	789624	24	221,97,155,175,117,27,75,126,54,51,27,155,140,186,182,126,169,117,129,111,163,105,161,121,	0,705,939,3614,4782,4987,5192,6123,6484,6670,7021,7361,7721,10286,10553,10920,11127,11572,12616,13271,13521,13823,15849,17283,
#Partially deleted in new
chr3	52813281	52830672	chr3:52813281-52830672	1	-	52813420	52830642	789624	22	209,97,155,175,117,27,75,126,27,155,140,186,182,126,169,117,129,111,163,105,161,120,	0,693,927,3602,4770,4975,5180,6111,7009,7349,7709,10274,10541,10908,11115,11560,12604,13259,13509,13811,15837,17271,
#Partially deleted in new
chr3	52813281	52835729	chr3:52813281-52835729	3	-	52833146	52834948	789624	24	209,97,155,175,1939,27,155,140,186,182,126,169,117,129,111,163,105,161,118,71,134,48,133,790,	0,693,927,3602,4770,7009,7349,7709,10274,10541,10908,11115,11560,12604,13259,13509,13811,15837,17271,18126,19832,20101,20335,21658,
#Deleted in new
chr3	52813282	52814212	chr3:52813282-52814212	0	-	52813282	52813282	8553170	2	208,238,	0,692,
#Partially deleted in new
chr3	52813285	52826917	chr3:52813285-52826917	0	-	52813420	52826917	789624	18	205,97,155,175,27,75,126,27,155,140,186,182,126,169,117,93,111,127,	0,689,923,3598,4971,5176,6107,7005,7345,7705,10270,10537,10904,11111,11556,12600,13255,13505,
#Partially deleted in new
chr3	52813312	52830687	chr3:52813312-52830687	0	-	52813312	52813312	8553170	23	178,97,155,175,117,27,75,126,237,27,155,140,186,182,126,169,117,129,111,163,105,161,135,	0,662,896,3571,4739,4944,5149,6080,6441,6978,7318,7678,10243,10510,10877,11084,11529,12573,13228,13478,13780,15806,17240,
#Partially deleted in new
chr3	52814276	52819598	chr3:52814276-52819598	0	-	52814276	52814276	8553170	5	87,175,232,75,206,	0,2607,3775,4185,5116,
#Deleted in new
chr3	52818051	52819901	chr3:52818051-52819901	0	-	52818051	52818051	8553170	4	232,75,126,148,	0,410,1341,1702,
#Partially deleted in new
chr3	52818525	52830688	chr3:52818525-52830688	0	-	52818525	52818525	8553170	16	11,126,237,27,155,140,186,182,126,169,117,129,111,163,105,136,	0,867,1228,1765,2105,2465,5030,5297,5664,5871,6316,7360,8015,8265,8567,12027,
#Deleted in new
chr3	52820381	52821064	chr3:52820381-52821064	0	-	52820381	52820381	8553170	2	404,74,	0,609,
#Partially deleted in new
chr3	52820589	52823400	chr3:52820589-52823400	0	-	52820589	52820589	8553170	2	196,66,	0,2745,
#Partially deleted in new
chr3	52820990	52823817	chr3:52820990-52823817	0	-	52820990	52820990	8553170	2	140,262,	0,2565,
#Deleted in new
chr3	52823934	52825314	chr3:52823934-52825314	3	+	52823934	52823934	789624	3	59,226,110,	0,177,1270,
#Deleted in new
chr3	52824460	52825247	chr3:52824460-52825247	0	-	52824460	52824460	8553170	2	105,406,	0,381,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	52829859	52831479	chr3:52829859-52831479	0	-	52829859	52829859	8553170	2	811,72,	0,1548,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	52829877	52833645	chr3:52829877-52833645	0	-	52829877	52829877	8553170	4	793,134,48,29,	0,3236,3505,3739,
#Deleted in new
chr3	52833113	52834915	chr3:52833113-52834915	1	-	52833323	52834767	789624	3	317,133,172,	0,503,1630,
#Deleted in new
chr3	52833120	52840262	chr3:52833120-52840262	0	-	52833120	52833120	8553170	4	310,133,363,4474,	0,496,1819,2668,
#Partially deleted in new
chr3	52833120	52842947	chr3:52833120-52842947	0	-	52833429	52842947	789624	5	310,133,64,111,137,	0,496,1819,7379,9690,
#Deleted in new
chr3	52833122	52835219	chr3:52833122-52835219	3	-	52833323	52834948	789624	3	308,133,280,	0,494,1817,
#Partially deleted in new
chr3	52833149	52897562	chr3:52833149-52897562	3	-	52833323	52897450	789624	10	281,133,111,150,78,113,122,96,49,272,	0,467,7350,9661,10571,11679,16642,19453,22246,64141,
#Deleted in new
chr3	52836218	52840607	chr3:52836218-52840607	0	-	52836623	52840607	789624	2	417,108,	0,4281,
#Partially deleted in new
chr3	52836755	52897596	chr3:52836755-52897596	3	-	52840493	52897450	789624	8	3855,150,78,113,122,96,49,306,	0,6055,6965,8073,13036,15847,18640,60535,
#Partially deleted in new
chr3	52840217	52841784	chr3:52840217-52841784	0	-	52840217	52840217	8553170	2	393,95,	0,1472,
#Partially deleted in new
chr3	52840293	52843169	chr3:52840293-52843169	0	-	52840293	52840293	8553170	3	317,150,75,	0,2517,2801,
#Deleted in new
chr3	52846462	52846552	chr3:52846462-52846552	3	-	52846462	52846462	5263520	1	90,	0,
#Partially deleted in new
chr3	52847256	52852699	chr3:52847256-52852699	0	-	52847501	52852699	789624	3	295,122,97,	0,2535,5346,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	52848084	52848553	chr3:52848084-52848553	3	-	52848084	52848084	8553170	1	469,	0,
#Partially deleted in new
chr3	52852620	52897543	chr3:52852620-52897543	0	-	52895917	52897450	789624	4	78,49,78,253,	0,2775,43257,44670,
#Partially deleted in new
chr3	52903571	53046068	chr3:52903571-53046068	3	-	52905135	52969128	789624	21	1705,129,246,179,176,110,140,65,43,114,127,83,151,102,95,247,89,241,95,158,253,	0,2541,3497,3983,7431,8966,9906,12578,14912,16965,18133,22459,24619,26757,27369,28490,31241,39781,50745,65529,142244,
#Partially deleted in new
chr3	52921702	52928495	chr3:52921702-52928495	0	-	52921702	52921702	8553170	3	129,83,305,	0,4328,6488,
#Partially deleted in new
chr3	52943352	53046052	chr3:52943352-53046052	0	-	52943352	52969128	789624	5	241,95,158,119,237,	0,10964,25748,99783,102463,
#Partially deleted in new
chr3	52943433	53046663	chr3:52943433-53046663	0	-	52943433	52969128	789624	4	160,95,158,204,	0,10883,25667,103026,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	52943565	53046641	chr3:52943565-53046641	0	-	52943565	52969128	789624	6	28,95,158,143,93,182,	0,10751,25535,74520,75464,102894,
#Partially deleted in new
chr3	52954314	53045269	chr3:52954314-53045269	0	-	52954314	52954314	8553170	4	97,158,119,324,	0,14786,88821,90631,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	52969118	53099453	chr3:52969118-53099453	0	-	53078183	53099453	789624	6	140,143,93,141,233,73,	0,48967,49911,108569,108860,130262,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	52969232	53046750	chr3:52969232-53046750	0	-	52969232	52969232	8553170	4	26,143,119,291,	0,48853,73903,77227,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	53019015	53099453	chr3:53019015-53099453	2	-	53077780	53099453	789624	5	107,119,141,250,73,	0,24120,58672,73353,80365,
#Deleted in new
chr3	53043135	53046057	chr3:53043135-53046057	0	-	53043135	53043135	8553170	2	119,242,	0,2680,
#Deleted in new
chr3	53046165	53048122	chr3:53046165-53048122	3	+	53046165	53046165	8553170	1	1957,	0,
#Partially deleted in new
chr3	53046458	53099453	chr3:53046458-53099453	1	-	53085848	53099453	789624	5	331,120,141,103,73,	0,661,31229,39291,52922,
#Partially deleted in new
chr3	53064282	53065091	chr3:53064282-53065091	7	-	53064282	53064282	16724991	1	809,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr3	53088482	53130462	chr3:53088482-53130462	3	-	53091902	53130400	789624	13	3588,250,106,145,131,51,79,138,102,190,117,86,125,	0,3886,10898,15470,17190,18336,23347,31401,33216,33891,35241,37426,41855,
#Partially deleted in new
chr3	53091664	53130453	chr3:53091664-53130453	1	-	53091902	53130400	789624	12	406,250,106,145,131,51,79,138,102,190,86,116,	0,704,7716,12288,14008,15154,20165,28219,30034,30709,34244,38673,
#Partially deleted in new
chr3	53103572	53120021	chr3:53103572-53120021	0	-	53103572	53103572	8553170	5	525,131,51,79,138,	0,2100,3246,8257,16311,
#Partially deleted in new
chr3	53104041	53130411	chr3:53104041-53130411	0	-	53104041	53130400	789624	9	56,131,51,79,102,190,117,86,74,	0,1631,2777,7788,17657,18332,19682,21867,26296,
#Partially deleted in new
chr3	53156008	53179694	chr3:53156008-53179694	0	+	53178422	53179694	789624	4	191,146,134,118,	0,330,22395,23568,
#Partially deleted in new
chr3	53161119	53192717	chr3:53161119-53192717	3	+	53178422	53192266	0	18	309,134,200,61,163,32,86,130,101,97,101,174,92,63,139,189,129,610,	0,17284,18457,20087,20324,20581,22001,22332,23754,24484,24807,25047,25484,26220,27600,27938,28753,30988,
#Partially deleted in new
chr3	53161198	53192554	chr3:53161198-53192554	1	+	53178422	53192266	0	19	230,112,134,200,61,163,32,86,130,101,97,101,174,92,63,139,189,129,447,	0,3905,17205,18378,20008,20245,20502,21922,22253,23675,24405,24728,24968,25405,26141,27521,27859,28674,30909,
#Partially deleted in new
chr3	53161520	53181267	chr3:53161520-53181267	0	+	53178422	53181267	789624	5	55,112,134,200,61,	0,3583,16883,18056,19686,
#Partially deleted in new
chr3	53165128	53184973	chr3:53165128-53184973	0	+	53178422	53184973	789624	7	87,134,200,61,163,32,100,	0,13275,14448,16078,16315,16572,19745,
#Partially deleted in new
chr3	53224706	53256031	chr3:53224706-53256031	3	-	53225755	53255942	0	14	1225,123,94,84,131,157,165,194,119,192,98,114,118,196,	0,2049,3349,3569,4300,4573,5750,6650,8449,10276,15544,16425,17418,31129,
#Partially deleted in new
chr3	53224713	53256000	chr3:53224713-53256000	1	-	53225755	53255942	0	15	896,181,123,94,84,131,157,165,194,119,192,98,114,118,165,	0,1037,2042,3342,3562,4293,4566,5743,6643,8442,10269,15537,16418,17411,31122,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	53225651	53235607	chr3:53225651-53235607	0	-	53225651	53225651	8553170	6	2498,84,131,157,165,4251,	0,2624,3355,3628,4805,5705,
#Partially deleted in new
chr3	53225656	53256022	chr3:53225656-53256022	0	-	53235039	53255942	789624	14	275,123,94,84,131,157,165,194,119,82,98,114,118,187,	0,1099,2399,2619,3350,3623,4800,5700,7499,9326,14594,15475,16468,30179,
#Partially deleted in new
chr3	53225656	53232299	chr3:53225656-53232299	0	-	53225656	53225656	8553170	8	275,123,94,84,131,157,165,943,	0,1099,2399,2619,3350,3623,4800,5700,
#Partially deleted in new
chr3	53225658	53256013	chr3:53225658-53256013	1	-	53225755	53235113	789624	15	273,123,94,84,131,157,165,194,119,134,26,39,96,118,178,	0,1097,2397,2617,3348,3621,4798,5698,7497,9324,9490,14592,15491,16466,30177,
#Partially deleted in new
chr3	53225701	53255974	chr3:53225701-53255974	0	-	53230565	53255942	789624	13	230,123,84,131,157,165,201,119,192,98,114,118,139,	0,1054,2574,3305,3578,4755,5648,7454,9281,14549,15430,16423,30134,
#Deleted in new
chr3	53228680	53229437	chr3:53228680-53229437	0	-	53228680	53228680	8553170	2	457,158,	0,599,
#Deleted in new
chr3	53231459	53235019	chr3:53231459-53235019	0	-	53231459	53231459	8553170	2	91,1864,	0,1696,
#Deleted in new
chr3	53232759	53235160	chr3:53232759-53235160	0	-	53232759	53232759	8553170	2	515,178,	0,2223,
#Partially deleted in new
chr3	53234851	53242199	chr3:53234851-53242199	0	-	53234851	53234851	8553170	4	323,98,114,75,	0,5399,6280,7273,
#Partially deleted in new
chr3	53241894	53256052	chr3:53241894-53256052	0	-	53241894	53241894	8553170	2	348,217,	0,13941,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	53283427	53347610	chr3:53283427-53347610	3	-	53287579	53347517	789624	10	4233,219,66,759,114,139,67,128,41,228,	0,4637,7363,8641,20749,28813,35979,58716,61474,63955,
#Partially deleted in new
chr3	53287365	53288361	chr3:53287365-53288361	0	-	53287365	53287365	8553170	2	295,297,	0,699,
#Partially deleted in new
chr3	53287369	53347525	chr3:53287369-53347525	1	-	53287579	53347517	789624	9	291,219,66,759,139,67,128,41,143,	0,695,3421,4699,24871,32037,54774,57532,60013,
#Partially deleted in new
chr3	53292632	53347586	chr3:53292632-53347586	0	-	53292632	53347517	789624	7	195,114,139,67,128,41,165,	0,11544,19608,26774,49511,52269,54789,
#Partially deleted in new
chr3	53304220	53347524	chr3:53304220-53347524	0	-	53304220	53347517	789624	6	70,139,67,128,35,142,	0,8020,15186,37923,40681,43162,
#Partially deleted in new
chr3	53304256	53347543	chr3:53304256-53347543	0	-	53338140	53347517	789624	7	34,139,67,55,128,41,161,	0,7984,15150,33834,37887,40645,43126,
#Partially deleted in new
chr3	53328962	53811406	chr3:53328962-53811406	1	+	53329305	53811406	789624	47	482,310,106,140,143,153,197,104,170,88,27,161,226,208,121,115,70,67,148,130,60,107,88,108,53,147,202,159,111,84,129,66,92,160,128,97,103,102,131,117,368,27,150,164,122,321,294,	0,168189,172652,321816,331170,336697,337376,344750,373678,389338,390792,393351,394471,394829,397916,401479,402114,403053,403852,406411,411317,414048,415777,416661,416860,418339,420305,422786,424609,433035,441461,443870,445624,446923,447640,447897,451063,452603,457859,471286,472095,473184,474460,476020,479686,481015,482150,
#Deleted in new
chr3	53333059	53333128	chr3:53333059-53333128	3	-	53333059	53333059	8553170	1	69,	0,
#Deleted in new
chr3	53387712	53387836	chr3:53387712-53387836	3	-	53387712	53387712	8553170	1	124,	0,
#Deleted in new
chr3	53474699	53475089	chr3:53474699-53475089	7	-	53474699	53474699	16724991	1	390,	0,
#Partially deleted in new
chr3	53494655	53812465	chr3:53494655-53812465	1	+	53495166	53811406	0	48	578,310,106,140,143,153,197,104,170,88,27,161,226,208,121,115,70,67,148,130,60,107,88,108,53,147,202,159,111,84,45,129,66,92,160,128,97,103,102,131,117,368,27,150,164,122,321,1353,	0,2496,6959,156123,165477,171004,171683,178367,207985,223645,225099,227658,228778,229136,232223,235786,236421,237360,238159,240718,245624,248355,250084,250968,251167,252646,254612,257093,258916,267342,275317,275768,278177,279931,281230,281947,282204,285370,286910,292166,305593,306402,307491,308767,310327,313993,315322,316457,
#Boundary problem: need 41, got 0, diff 41, mapped 0.0
chr3	53494673	53792432	chr3:53494673-53792432	1	+	53495166	53791001	789624	41	560,310,106,140,143,153,197,104,170,88,27,161,226,208,121,115,70,67,148,130,60,107,88,108,53,147,202,159,111,84,45,129,66,92,160,128,97,103,102,131,1452,	0,2478,6941,156105,165459,170986,171665,179039,207967,223627,225081,227640,228760,229118,232205,235768,236403,237342,238141,240700,245606,248337,250066,250950,251149,252628,254594,257075,258898,267324,275299,275750,278159,279913,281212,281929,282186,285352,286892,292148,296307,
#Partially deleted in new
chr3	53495048	53813733	chr3:53495048-53813733	3	+	53495166	53811406	0	49	185,310,106,140,143,153,197,104,170,88,60,27,161,226,208,121,115,70,67,148,130,60,107,88,108,53,147,202,159,111,84,45,129,66,92,160,128,97,103,102,131,117,368,27,150,164,122,321,2621,	0,2103,6566,155730,165084,170611,171290,178664,207592,223252,223633,224706,227265,228385,228743,231830,235393,236028,236967,237766,240325,245231,247962,249691,250575,250774,252253,254219,256700,258523,266949,274924,275375,277784,279538,280837,281554,281811,284977,286517,291773,305200,306009,307098,308374,309934,313600,314929,316064,
#Partially deleted in new
chr3	53495048	53812465	chr3:53495048-53812465	1	+	53495166	53811406	0	49	185,310,106,140,143,153,197,104,170,88,60,27,161,226,208,121,115,70,67,148,130,60,107,88,108,53,147,202,159,111,84,45,129,66,92,160,128,97,103,102,131,117,368,27,150,164,122,321,1353,	0,2103,6566,155730,165084,170611,171290,178664,207592,223252,223633,224706,227265,228385,228743,231830,235393,236028,236967,237766,240325,245231,247962,249691,250575,250774,252253,254219,256700,258523,266949,274924,275375,277784,279538,280837,281554,281811,284977,286517,291773,305200,306009,307098,308374,309934,313600,314929,316064,
#Partially deleted in new
chr3	53495158	53650957	chr3:53495158-53650957	0	+	53495158	53495158	8553170	4	75,310,106,179,	0,1993,6456,155620,
#Partially deleted in new
chr3	53495166	53811406	chr3:53495166-53811406	1	+	53495166	53811406	0	46	67,310,106,140,143,153,197,104,170,88,27,161,226,208,121,115,70,67,148,130,60,107,88,108,53,147,202,159,111,84,129,66,92,160,128,97,103,102,131,117,368,150,164,122,321,294,	0,1985,6448,155612,164966,170493,171172,177856,207474,223134,224588,227147,228267,228625,231712,235275,235910,236849,237648,240207,245113,247844,249573,250457,250656,252135,254101,256582,258405,266831,275257,277666,279420,280719,281436,281693,284859,286399,291655,305082,305891,308256,309816,313482,314811,315946,
#Partially deleted in new
chr3	53495166	53811406	chr3:53495166-53811406	1	+	53495166	53811406	789624	47	67,310,106,140,143,153,197,104,170,88,27,161,226,208,121,115,70,67,148,130,60,107,88,108,53,147,202,159,111,84,129,66,92,160,128,97,103,102,131,117,368,27,150,164,122,321,294,	0,1985,6448,155612,164966,170493,171172,178546,207474,223134,224588,227147,228267,228625,231712,235275,235910,236849,237648,240207,245113,247844,249573,250457,250656,252135,254101,256582,258405,266831,275257,277666,279420,280719,281436,281693,284859,286399,291655,305082,305891,306980,308256,309816,313482,314811,315946,
#Partially deleted in new
chr3	53495193	53791742	chr3:53495193-53791742	0	+	53495193	53791001	789624	41	40,310,106,140,143,153,197,104,170,88,60,27,161,226,208,121,115,70,67,148,130,60,107,88,108,53,147,202,159,111,84,129,66,92,160,128,97,103,102,131,762,	0,1958,6421,155585,164939,170466,171145,178519,207447,223107,223488,224561,227120,228240,228598,231685,235248,235883,236822,237621,240180,245086,247817,249546,250430,250629,252108,254074,256555,258378,267357,275230,277639,279393,280692,281409,281666,284832,286372,291628,295787,
#Deleted in new
chr3	53530321	53530401	chr3:53530321-53530401	3	-	53530321	53530321	8553170	1	80,	0,
#Partially deleted in new
chr3	53660269	53781924	chr3:53660269-53781924	0	+	53660269	53781693	789624	36	6,153,197,104,170,88,60,27,161,226,208,121,115,70,67,148,130,60,107,88,108,53,147,202,159,111,84,45,129,66,92,160,128,97,103,359,	0,5390,6069,13443,42371,58031,58412,59485,62044,63164,63522,66609,70172,70807,71746,72545,75104,80010,82741,84470,85354,85553,87032,88998,91479,93302,102281,109703,110154,112563,114317,115616,116333,116590,119756,121296,
#Partially deleted in new
chr3	53666362	53722458	chr3:53666362-53722458	0	+	53666362	53722458	789624	7	173,104,170,84,88,27,145,	0,7350,36278,44032,51938,53392,55951,
#Partially deleted in new
chr3	53666377	53674047	chr3:53666377-53674047	0	+	53666377	53666377	8553170	2	158,335,	0,7335,
#Partially deleted in new
chr3	53666400	53811508	chr3:53666400-53811508	0	+	53666400	53811406	789624	43	135,104,170,88,60,27,161,226,208,121,115,70,67,148,130,60,107,88,108,53,147,202,159,111,84,45,129,66,92,160,128,97,103,102,131,117,368,27,150,164,122,321,396,	0,6622,36240,51900,52281,53354,55913,57033,57391,60478,64041,64676,65615,66414,68973,73879,76610,78339,79223,79422,80901,82867,85348,87171,96150,103572,104023,106432,108186,109485,110202,110459,113625,115165,120421,133848,134657,135746,137022,138582,142248,143577,144712,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	53673060	53679765	chr3:53673060-53679765	0	+	53673060	53673060	8553170	2	66,772,	0,5933,
#Partially deleted in new
chr3	53702776	53718691	chr3:53702776-53718691	0	+	53702776	53718691	789624	4	34,84,88,10,	0,7618,15524,15905,
#Partially deleted in new
chr3	53730484	53745865	chr3:53730484-53745865	0	+	53730484	53745865	789624	10	72,70,67,145,130,60,107,88,108,43,	0,592,1531,2333,4889,9934,12526,14255,15139,15338,
#Partially deleted in new
chr3	53731023	53745849	chr3:53731023-53745849	0	+	53731023	53731023	8553170	8	123,67,130,60,107,88,108,27,	0,992,4350,9256,11987,13716,14600,14799,
#Partially deleted in new
chr3	53731028	53743062	chr3:53731028-53743062	0	+	53731028	53731028	8553170	6	118,67,148,130,60,52,	0,987,1786,4345,9251,11982,
#Partially deleted in new
chr3	53745827	53772886	chr3:53745827-53772886	0	+	53745827	53772886	789624	7	48,147,202,159,111,129,54,	0,1474,3440,5921,7744,24596,27005,
#Partially deleted in new
chr3	53749079	53791179	chr3:53749079-53791179	1	+	53749379	53791001	789624	15	67,202,159,111,84,129,66,92,160,128,97,103,102,131,199,	0,188,2669,4492,12918,21344,23753,25507,26806,27523,27780,30946,32486,37742,41901,
#Partially deleted in new
chr3	53749373	53776030	chr3:53749373-53776030	0	+	53749373	53776030	789624	6	96,159,111,66,92,145,	0,2375,4198,23459,25213,26512,
#Partially deleted in new
chr3	53753621	53812777	chr3:53753621-53812777	0	+	53753621	53801256	789624	20	61,84,45,129,66,92,160,128,97,103,102,131,117,214,27,150,164,122,321,1665,	0,8929,16351,16802,19211,20965,22264,22981,23238,26404,27944,33200,46627,47590,48525,49801,51361,55027,56356,57491,
#Deleted in new
chr3	53753651	53766186	chr3:53753651-53766186	0	+	53753651	53753651	8553170	3	31,84,735,	0,8346,11800,
#Partially deleted in new
chr3	53773401	53783105	chr3:53773401-53783105	0	+	53773401	53773401	8553170	8	187,92,160,128,97,103,102,731,	0,1185,2484,3201,3458,6624,8164,8973,
#Partially deleted in new
chr3	53773817	53812315	chr3:53773817-53812315	0	+	53773817	53773817	8553170	15	861,160,128,97,103,102,131,611,214,27,150,164,122,321,1203,	0,2068,2785,3042,6208,7748,13004,26431,27394,28329,29605,31165,34831,36160,37295,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	53785522	53800344	chr3:53785522-53800344	0	+	53785522	53785522	8553170	2	1430,96,	0,14726,
#Partially deleted in new
chr3	53796121	53811297	chr3:53796121-53811297	0	+	53796121	53796121	8553170	9	279,117,368,27,150,164,122,337,185,	0,4127,4936,6025,7301,8861,12527,13840,14991,
#Deleted in new
chr3	53797763	53798019	chr3:53797763-53798019	3	-	53797763	53797763	8553170	1	256,	0,
#Partially deleted in new
chr3	53799898	53813705	chr3:53799898-53813705	0	+	53799898	53799898	8553170	8	467,368,27,150,164,122,321,2593,	0,1159,2248,3524,5084,8750,10079,11214,
#Partially deleted in new
chr3	53801263	53805218	chr3:53801263-53805218	0	+	53801263	53801263	8553170	3	162,150,236,	0,2159,3719,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	53807510	53812385	chr3:53807510-53812385	0	+	53807510	53807510	8553170	3	1260,321,1273,	0,2467,3602,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	53808569	53810556	chr3:53808569-53810556	0	+	53808569	53808569	8553170	1	1987,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	53812334	53846390	chr3:53812334-53846390	3	-	53817776	53824008	789624	9	5861,103,143,135,130,152,762,71,308,	0,6603,7197,8139,9312,10156,10971,28594,33748,
#Partially deleted in new
chr3	53823543	53844617	chr3:53823543-53844617	0	-	53823543	53824008	789624	3	524,71,36,	0,17385,21038,
#Partially deleted in new
chr3	53823630	53844769	chr3:53823630-53844769	0	-	53823630	53824008	789624	3	437,71,57,	0,17298,21082,
#Partially deleted in new
chr3	53846579	53865800	chr3:53846579-53865800	3	+	53846588	53865308	789624	11	69,25,141,128,127,48,143,75,100,99,1055,	0,2084,3075,5419,6291,8714,10264,11036,12139,13550,18166,
#Partially deleted in new
chr3	53846583	53865588	chr3:53846583-53865588	0	+	53846583	53846583	8553170	10	65,25,141,128,127,48,143,1203,99,843,	0,2080,3071,5415,6287,8710,10260,11032,13546,18162,
#Partially deleted in new
chr3	53846584	53864891	chr3:53846584-53864891	0	+	53846588	53864891	789624	10	64,25,141,128,127,143,75,100,99,146,	0,2079,3070,5414,6286,10259,11031,12134,13545,18161,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	53858993	53861576	chr3:53858993-53861576	3	-	53858993	53858993	8553170	1	2583,	0,
#Partially deleted in new
chr3	53867065	53882202	chr3:53867065-53882202	3	-	53868718	53882101	0	13	1797,164,265,141,96,154,133,94,174,105,111,171,224,	0,2916,4166,5318,5966,7145,8882,9554,10148,10581,11291,12873,14913,
#Partially deleted in new
chr3	53868495	53870297	chr3:53868495-53870297	0	-	53868495	53868495	8553170	2	367,316,	0,1486,
#Partially deleted in new
chr3	53868501	53881824	chr3:53868501-53881824	1	-	53868718	53878428	0	13	361,164,265,141,96,154,133,94,174,105,111,134,159,	0,1480,2730,3882,4530,5709,7446,8118,8712,9145,9855,11437,13164,
#Partially deleted in new
chr3	53868652	53877293	chr3:53868652-53877293	0	-	53868718	53877293	789624	8	210,164,265,141,115,133,94,80,	0,1329,2579,3731,4379,7295,7967,8561,
#Deleted in new
chr3	53871157	53873068	chr3:53871157-53873068	0	-	53871157	53871157	8553170	3	339,141,37,	0,1226,1874,
#Partially deleted in new
chr3	53877258	53881857	chr3:53877258-53881857	0	-	53877258	53878428	789624	5	129,105,111,171,192,	0,388,1098,2680,4407,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	53884409	53891988	chr3:53884409-53891988	3	-	53885557	53891788	789624	5	1152,87,84,91,219,	0,1416,2441,3983,7360,
#Partially deleted in new
chr3	53885199	53891962	chr3:53885199-53891962	1	-	53885557	53891788	789624	6	362,5,79,84,91,193,	0,626,634,1651,3193,6570,
#Partially deleted in new
chr3	53885300	53891865	chr3:53885300-53891865	0	-	53885879	53891788	789624	5	261,79,84,91,96,	0,525,1550,3092,6469,
#Partially deleted in new
chr3	53887995	53891855	chr3:53887995-53891855	0	-	53887995	53887995	8553170	2	488,86,	0,3774,
#Partially deleted in new
chr3	53888394	53891885	chr3:53888394-53891885	0	-	53888394	53888394	8553170	3	89,135,116,	0,2531,3375,
#Deleted in new
chr3	54047748	54048793	chr3:54047748-54048793	7	-	54047748	54047748	16724991	1	1045,	0,
#Partially deleted in new
chr3	54122546	55074473	chr3:54122546-55074473	3	+	54122713	55074206	789624	39	34,206,82,117,60,163,132,61,151,75,90,114,79,134,18,72,81,75,84,72,62,68,46,98,94,96,122,81,62,45,63,71,76,53,56,112,115,81,360,	0,83,966,197895,264168,380945,440253,447248,447407,459256,505240,519581,630052,641671,694306,714612,716021,723846,748992,756471,756803,758249,762734,762942,765412,768808,774202,777241,845903,847253,862061,865136,882216,885243,886841,895659,950898,951232,951567,
#Partially deleted in new
chr3	54122665	55074553	chr3:54122665-55074553	1	+	54122713	55074206	789624	38	170,82,117,60,163,132,61,151,75,90,114,79,134,18,72,81,75,84,72,62,68,46,98,94,96,122,81,62,45,63,71,76,53,56,112,115,81,440,	0,847,197776,264049,380826,440134,447129,447288,459137,505121,519462,629933,641552,694187,714493,715902,723727,748873,756352,756684,758130,762615,762823,765293,768689,774083,777122,845784,847134,861942,865017,882097,885124,886722,895540,950779,951113,951448,
#Partially deleted in new
chr3	54122665	55074557	chr3:54122665-55074557	1	+	54122713	55074206	789624	38	170,82,117,60,163,132,61,151,75,90,114,79,134,18,72,81,75,84,72,62,68,46,98,94,96,122,81,62,45,63,71,76,53,56,112,113,83,444,	0,847,197776,264049,380826,440134,447129,447288,459137,505121,519462,629933,641552,694187,714493,715902,723727,748873,756352,756684,758130,762615,762823,765293,768689,774083,777122,845784,847134,861942,865017,882097,885124,886722,895540,950779,951111,951448,
#Partially deleted in new
chr3	54123460	55074557	chr3:54123460-55074557	0	+	54320519	54885290	789624	35	134,117,60,163,132,61,151,75,90,114,79,134,72,81,75,84,72,68,46,98,94,96,122,81,62,45,63,71,76,53,56,112,113,83,444,	0,196981,263254,380031,439339,446334,446493,458342,504326,518667,629138,640757,713698,715107,722932,748078,755557,757335,761820,762028,764498,767894,773288,776327,844989,846339,861147,864222,881302,884329,885927,894745,949984,950316,950653,
#Partially deleted in new
chr3	54123460	55074557	chr3:54123460-55074557	1	+	54320519	55074206	789624	37	134,117,60,163,132,61,151,75,90,114,79,134,18,72,81,75,84,72,62,68,46,98,94,96,122,81,62,45,63,71,76,53,56,112,113,83,444,	0,196981,263254,380031,439339,446334,446493,458342,504326,518667,629138,640757,693392,713698,715107,722932,748078,755557,755889,757335,761820,762028,764498,767894,773288,776327,844989,846339,861147,864222,881302,884329,885927,894745,949984,950316,950653,
#Partially deleted in new
chr3	54123460	55074376	chr3:54123460-55074376	1	+	54320519	54885290	789624	35	134,117,60,163,132,61,151,75,90,114,79,134,72,81,75,84,72,68,46,98,94,96,122,81,62,45,63,71,76,53,56,112,115,81,263,	0,196981,263254,380031,439339,446334,446493,458342,504326,518667,629138,640757,713698,715107,722932,748078,755557,757335,761820,762028,764498,767894,773288,776327,844989,846339,861147,864222,881302,884329,885927,894745,949984,950318,950653,
#Partially deleted in new
chr3	54123478	54888024	chr3:54123478-54888024	0	+	54320519	54885290	789624	22	116,117,60,163,132,61,151,75,90,114,79,134,18,72,81,75,84,72,68,46,98,66,	0,196963,263236,380013,439321,446316,446475,458324,504308,518649,629120,640739,693374,713680,715089,722914,748060,755539,757317,761802,762010,764480,
#Partially deleted in new
chr3	54177795	54562915	chr3:54177795-54562915	0	+	54320519	54562915	789624	5	103,117,60,163,116,	0,142646,208919,325696,385004,
#Partially deleted in new
chr3	54197370	54885586	chr3:54197370-54885586	0	+	54320519	54562841	789624	21	137,117,60,132,61,151,75,90,114,79,134,18,72,81,75,84,72,62,68,46,98,	0,123071,189344,365429,372424,372583,384432,430416,444757,555228,566847,619482,639788,641197,649022,674168,681647,681979,683425,687910,688118,
#Partially deleted in new
chr3	54272773	54320541	chr3:54272773-54320541	0	+	54272773	54272773	8553170	2	395,100,	0,47668,
#Deleted in new
chr3	54626214	54626646	chr3:54626214-54626646	7	+	54626214	54626214	16724991	1	432,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	54874604	54901255	chr3:54874604-54901255	3	-	54874604	54874604	5263520	7	1106,43,139,257,143,293,97,	0,1664,2411,4083,20008,22061,26554,
#Partially deleted in new
chr3	54918236	54928074	chr3:54918236-54928074	3	-	54918458	54927911	789624	3	656,597,170,	0,6382,9668,
#Partially deleted in new
chr3	54918332	54967088	chr3:54918332-54967088	1	-	54918458	54924994	789624	3	560,597,161,	0,6286,48595,
#Partially deleted in new
chr3	54987677	55074216	chr3:54987677-55074216	0	+	54987677	54987677	8553170	7	76,76,53,56,112,284,103,	0,17085,20112,21710,30528,85898,86436,
#Partially deleted in new
chr3	55007775	55074203	chr3:55007775-55074203	0	+	55007775	55007775	8553170	5	67,56,112,415,90,	0,1612,10430,65669,66338,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	55166909	55175732	chr3:55166909-55175732	3	-	55166909	55166909	8553170	3	208,59,162,	0,4293,8661,
#Partially deleted in new
chr3	55178171	55189214	chr3:55178171-55189214	3	+	55178171	55178171	789624	3	245,110,119,	0,8546,10924,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	55296199	55300738	chr3:55296199-55300738	3	+	55296199	55296199	8553170	2	117,1485,	0,3054,
#Partially deleted in new
chr3	55335461	55350915	chr3:55335461-55350915	3	-	55335461	55335461	8553170	2	526,61,	0,15393,
#Deleted in new
chr3	55360442	55361829	chr3:55360442-55361829	3	-	55360442	55360442	8553170	2	273,111,	0,1276,
#Partially deleted in new
chr3	55465714	55489945	chr3:55465714-55489945	3	-	55470091	55486985	789624	6	4836,293,251,134,419,109,	0,8622,13599,15070,21265,24122,
#Partially deleted in new
chr3	55465715	55487642	chr3:55465715-55487642	1	-	55470091	55486985	789624	5	4835,293,251,134,663,	0,8621,13598,15069,21264,
#Deleted in new
chr3	55469387	55470141	chr3:55469387-55470141	0	-	55469387	55469387	8553170	2	230,291,	0,463,
#Partially deleted in new
chr3	55469992	55481393	chr3:55469992-55481393	1	-	55470091	55480879	789624	5	558,293,251,134,63,	0,4344,9321,10792,11338,
#Partially deleted in new
chr3	55474333	55481196	chr3:55474333-55481196	0	-	55474333	55480879	789624	3	296,251,412,	0,4980,6451,
#Deleted in new
chr3	55479039	55480920	chr3:55479039-55480920	0	-	55479039	55479039	8553170	2	525,136,	0,1745,
#Deleted in new
chr3	55487698	55488308	chr3:55487698-55488308	3	+	55487698	55487698	8553170	2	181,319,	0,291,
#Deleted in new
chr3	55489154	55490539	chr3:55489154-55490539	0	-	55489154	55489154	8553170	3	109,138,246,	0,875,1139,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	55493829	55505261	chr3:55493829-55505261	3	-	55493829	55493829	8553170	4	226,89,184,64,	0,3559,7769,11368,
#Partially deleted in new
chr3	55508307	56468363	chr3:55508307-56468363	3	-	55683832	56435007	789624	18	2969,66,135,148,161,136,12,194,141,141,138,168,168,156,75,417,797,116,	0,175486,191070,226463,380081,442117,477669,483749,498873,502141,510586,572509,631201,640669,665138,787711,926043,959940,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	55508310	55610910	chr3:55508310-55610910	0	-	55508310	55508310	8553170	3	2966,187,335,	0,98469,102265,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	55509233	55610910	chr3:55509233-55610910	0	-	55509233	55509233	8553170	3	2043,216,335,	0,97517,101342,
#Partially deleted in new
chr3	55510562	55647226	chr3:55510562-55647226	0	-	55510562	55510562	8553170	2	714,190,	0,136474,
#Partially deleted in new
chr3	55510562	55607910	chr3:55510562-55607910	0	-	55510562	55510562	8553170	3	714,216,38,	0,96188,97310,
#Partially deleted in new
chr3	55510775	56468337	chr3:55510775-56468337	0	-	55683832	56435007	789624	19	501,187,66,135,148,161,136,12,194,141,141,138,168,168,156,75,417,797,90,	0,96004,173018,188602,223995,377613,439649,475201,481281,496405,499673,508118,570041,628733,638201,662670,785243,923575,957472,
#Partially deleted in new
chr3	55510775	56468337	chr3:55510775-56468337	1	-	55683832	56435007	789624	19	501,187,66,135,148,161,136,12,194,141,141,138,168,168,156,75,417,797,90,	0,96004,173018,188602,223995,377613,439649,475201,481281,496405,499673,508118,570041,628733,638201,662670,785243,923575,957472,
#Partially deleted in new
chr3	55510903	55699518	chr3:55510903-55699518	0	-	55510903	55510903	8553170	3	373,66,141,	0,172890,188474,
#Partially deleted in new
chr3	55511139	55766799	chr3:55511139-55766799	0	-	55511139	55511139	8553170	4	137,135,144,116,	0,188238,223631,255544,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	55606595	55610893	chr3:55606595-55610893	0	-	55606595	55606595	8553170	2	371,318,	0,3980,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	55610602	55613104	chr3:55610602-55613104	3	+	55610602	55610602	8553170	3	278,42,233,	0,2092,2269,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	55657205	55659382	chr3:55657205-55659382	3	-	55657205	55657205	789624	1	2177,	0,
#Partially deleted in new
chr3	55734837	56173510	chr3:55734837-56173510	0	-	55734837	56173510	789624	12	81,161,136,194,36,141,141,138,168,168,156,65,	0,153551,215587,257219,268261,272343,275611,284056,345979,404671,414139,438608,
#Deleted in new
chr3	55852491	55852594	chr3:55852491-55852594	3	-	55852491	55852491	5263520	1	103,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	56072103	56072407	chr3:56072103-56072407	3	+	56072103	56072103	8553170	1	304,	0,
#Partially deleted in new
chr3	56148987	56173899	chr3:56148987-56173899	0	-	56148987	56148987	8553170	2	145,454,	0,24458,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	56185103	56185222	chr3:56185103-56185222	7	+	56185103	56185103	16724991	1	119,	0,
#Deleted in new
chr3	56433788	56434747	chr3:56433788-56434747	0	-	56433788	56433788	8553170	2	261,397,	0,562,
#Partially deleted in new
chr3	56434581	56467134	chr3:56434581-56467134	0	-	56434581	56434581	8553170	2	566,63,	0,32490,
#Partially deleted in new
chr3	56557160	56617301	chr3:56557160-56617301	0	+	56557242	56617301	789624	13	93,65,26,442,166,104,122,251,85,162,145,132,190,	0,1685,2408,6523,9433,9789,14020,36330,36783,56428,57967,58761,59951,
#Partially deleted in new
chr3	56557162	56564139	chr3:56557162-56564139	0	+	56557242	56560942	789624	6	91,65,26,151,142,234,	0,1683,2406,3699,6521,6743,
#Partially deleted in new
chr3	56557162	56566739	chr3:56557162-56566739	0	+	56557162	56557162	8553170	4	91,65,442,146,	0,1683,6521,9431,
#Partially deleted in new
chr3	56557172	56621797	chr3:56557172-56621797	1	+	56557242	56621618	789624	18	81,65,26,442,166,104,122,132,251,85,162,145,132,494,41,257,125,266,	0,1673,2396,6511,9421,9777,14008,35797,36318,36771,56416,57955,58749,59939,60999,62098,62604,64359,
#Partially deleted in new
chr3	56557187	56621762	chr3:56557187-56621762	3	+	56563683	56621618	789624	18	47,65,26,442,166,104,122,132,251,85,162,145,132,494,41,257,125,231,	0,1658,2381,6496,9406,9762,13993,35782,36303,36756,56401,57940,58734,59924,60984,62083,62589,64344,
#Partially deleted in new
chr3	56557190	56564125	chr3:56557190-56564125	0	+	56557190	56557190	8553170	4	63,65,26,474,	0,1655,2378,6461,
#Partially deleted in new
chr3	56557202	56566706	chr3:56557202-56566706	0	+	56557202	56557202	8553170	6	51,65,26,442,71,113,	0,1643,2366,6481,7931,9391,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	56557209	56570746	chr3:56557209-56570746	0	+	56557242	56560942	789624	8	44,65,26,151,442,147,104,1434,	0,1636,2359,3652,6474,9384,9740,12103,
#Partially deleted in new
chr3	56557210	56621808	chr3:56557210-56621808	0	+	56563683	56572366	789624	19	24,65,26,442,166,104,122,92,132,251,85,140,145,132,494,41,257,125,277,	0,1635,2358,6473,9383,9739,13970,15126,35759,36280,36733,56400,57917,58711,59901,60961,62060,62566,64321,
#Partially deleted in new
chr3	56557218	56621808	chr3:56557218-56621808	0	+	56557242	56566951	789624	18	35,65,26,442,147,104,122,132,251,85,162,145,132,494,41,257,125,277,	0,1627,2350,6465,9375,9731,13962,35751,36272,36725,56370,57909,58703,59893,60953,62052,62558,64313,
#Partially deleted in new
chr3	56557218	56565205	chr3:56557218-56565205	0	+	56557242	56561271	789624	6	35,65,26,122,442,72,	0,1627,2350,4038,6465,7915,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	56557227	56570671	chr3:56557227-56570671	0	+	56557227	56557227	8553170	7	26,65,26,442,166,104,1359,	0,1618,2341,6456,9366,9722,12085,
#Partially deleted in new
chr3	56557706	56564156	chr3:56557706-56564156	0	+	56557706	56557706	8553170	3	251,65,473,	0,1139,5977,
#Partially deleted in new
chr3	56558844	56615153	chr3:56558844-56615153	0	+	56558844	56558844	8553170	8	66,26,104,132,251,85,162,26,	0,724,8105,34125,34646,35099,54744,56283,
#Partially deleted in new
chr3	56558854	56561222	chr3:56558854-56561222	0	+	56558854	56558854	8553170	3	56,26,361,	0,714,2007,
#Deleted in new
chr3	56563515	56565177	chr3:56563515-56565177	0	+	56563515	56563515	8553170	2	610,44,	0,1618,
#Partially deleted in new
chr3	56566660	56572910	chr3:56566660-56572910	0	+	56566660	56566660	8553170	4	99,104,122,574,	0,289,4520,5676,
#Partially deleted in new
chr3	56566782	56593061	chr3:56566782-56593061	0	+	56566782	56566782	8553170	4	271,122,92,92,	0,4398,5554,26187,
#Partially deleted in new
chr3	56566950	56571379	chr3:56566950-56571379	0	+	56566950	56566950	8553170	2	103,199,	0,4230,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	56593711	56615417	chr3:56593711-56615417	0	+	56593711	56593711	8553170	4	30,85,162,290,	0,232,19877,21416,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	56615868	56621818	chr3:56615868-56621818	0	+	56615868	56615868	8553170	5	1737,41,257,125,287,	0,2303,3402,3908,5663,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	56617100	56621762	chr3:56617100-56621762	0	+	56617100	56617100	8553170	3	2427,125,231,	0,2676,4431,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	56620132	56633972	chr3:56620132-56633972	0	-	56620132	56620132	8553170	7	3434,165,179,109,160,123,929,	0,4346,4695,6904,7449,8359,12911,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	56620544	56664331	chr3:56620544-56664331	1	-	56623036	56660989	789624	17	3022,165,179,109,160,123,800,60,145,404,702,72,73,104,104,106,791,	0,3934,4283,6492,7037,7947,12499,18161,19441,20804,25977,28277,28440,40186,40369,41840,42996,
#Partially deleted in new
chr3	56622737	56683017	chr3:56622737-56683017	3	-	56623787	56683006	789624	24	1106,165,179,109,160,123,923,60,145,404,702,72,73,104,104,106,32,125,162,92,73,93,146,342,	0,1741,2090,4299,4844,5754,10306,15968,17248,18611,23784,26084,26247,37993,38176,39647,40803,43522,45659,46962,47335,48862,50842,59938,
#Partially deleted in new
chr3	56622858	56683237	chr3:56622858-56683237	1	-	56623036	56683006	789624	23	708,165,179,109,160,123,800,145,404,702,72,73,104,104,106,32,125,162,92,73,93,146,562,	0,1620,1969,4178,4723,5633,10185,17127,18490,23663,25963,26126,37872,38055,39526,40682,43401,45538,46841,47214,48741,50721,59817,
#Partially deleted in new
chr3	56622861	56647172	chr3:56622861-56647172	1	-	56623036	56647014	789624	10	705,165,179,109,160,123,800,145,404,651,	0,1617,1966,4175,4720,5630,10182,17124,18487,23660,
#Partially deleted in new
chr3	56623116	56627070	chr3:56623116-56627070	0	-	56623116	56623116	8553170	3	727,165,34,	0,1362,3920,
#Partially deleted in new
chr3	56624834	56628640	chr3:56624834-56628640	0	-	56624834	56624834	8553170	4	172,109,160,149,	0,2202,2747,3657,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	56627648	56629103	chr3:56627648-56629103	0	-	56627648	56627648	8553170	3	93,123,360,	0,843,1095,
#Partially deleted in new
chr3	56660968	56668489	chr3:56660968-56668489	0	-	56660968	56660968	8553170	4	49,32,125,93,	0,2572,5291,7428,
#Partially deleted in new
chr3	56671351	56673673	chr3:56671351-56673673	0	-	56671351	56671351	8553170	2	341,94,	0,2228,
#Partially deleted in new
chr3	56727417	56801967	chr3:56727417-56801967	3	-	56729269	56801798	789624	10	2205,187,171,258,77,97,63,171,108,265,	0,4820,9767,17787,23638,23882,26086,27563,46291,74285,
#Partially deleted in new
chr3	56727417	57079308	chr3:56727417-57079308	1	-	56729269	57035149	789624	13	2205,187,171,258,77,97,63,171,108,63,67,89,83,	0,4820,9767,17787,23638,23882,26086,27563,46291,154874,231405,307670,351808,
#Partially deleted in new
chr3	56727420	56775657	chr3:56727420-56775657	1	-	56729269	56775113	789624	10	2202,187,171,258,77,97,63,171,108,658,	0,4817,9764,17784,23635,23879,26083,27560,46288,47579,
#Partially deleted in new
chr3	56728231	56801949	chr3:56728231-56801949	0	-	56745439	56801949	789624	9	1391,187,171,258,97,63,171,108,247,	0,4006,8953,16973,23068,25272,26749,45477,73471,
#Partially deleted in new
chr3	56728986	56916471	chr3:56728986-56916471	1	-	56729269	56916359	789624	11	636,187,171,258,77,97,63,171,108,63,163,	0,3251,8198,16218,22069,22313,24517,25994,44722,153305,187322,
#Partially deleted in new
chr3	56729020	56775567	chr3:56729020-56775567	1	-	56729269	56775113	789624	10	602,187,171,258,77,97,63,171,108,463,	0,3217,8164,16184,22035,22279,24483,25960,44688,46084,
#Partially deleted in new
chr3	56731592	56801949	chr3:56731592-56801949	1	-	56732214	56801798	789624	9	832,171,258,77,97,63,171,108,247,	0,5592,13612,19463,19707,21911,23388,42116,70110,
#Partially deleted in new
chr3	56751117	57079308	chr3:56751117-57079308	0	-	56751117	56958858	789624	8	15,97,63,171,108,63,67,83,	0,182,2386,3863,22591,131174,207705,328108,
#Partially deleted in new
chr3	56751299	56977375	chr3:56751299-56977375	0	-	56751299	56977295	789624	7	97,63,171,108,63,67,100,	0,2204,3681,22409,130992,207523,225976,
#Partially deleted in new
chr3	56751348	56939909	chr3:56751348-56939909	0	-	56751348	56751348	8553170	6	48,63,171,108,63,114,	0,2155,3632,22360,130943,188447,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	56753493	56939907	chr3:56753493-56939907	0	-	56753493	56753493	8553170	6	73,171,108,63,260,112,	0,1487,20215,128798,185127,186302,
#Partially deleted in new
chr3	56754980	57079329	chr3:56754980-57079329	0	-	57007245	57035149	789624	7	171,108,63,67,155,89,104,	0,18728,127311,203842,252201,280107,324245,
#Partially deleted in new
chr3	56755071	57078815	chr3:56755071-57078815	0	-	56755071	56755071	8553170	5	80,108,63,67,269,	0,18637,127220,203751,323475,
#Partially deleted in new
chr3	56773708	57079265	chr3:56773708-57079265	0	-	56773708	57035149	789624	6	108,63,67,89,147,40,	0,108583,185114,261379,303037,305517,
#Partially deleted in new
chr3	56773766	56977375	chr3:56773766-56977375	0	-	56898571	56977295	789624	6	50,63,89,67,59,100,	0,108525,124783,185056,201995,203509,
#Partially deleted in new
chr3	56940039	56960854	chr3:56940039-56960854	3	+	56940039	56940039	789624	3	138,76,275,	0,541,20540,
#Deleted in new
chr3	56940075	56941048	chr3:56940075-56941048	1	+	56940075	56940075	8553170	3	102,76,158,	0,505,815,
#Partially deleted in new
chr3	57060440	57075432	chr3:57060440-57075432	3	+	57073694	57074267	789624	2	346,2067,	0,12925,
#Deleted in new
chr3	57078942	57080101	chr3:57078942-57080101	3	+	57078942	57078942	8553170	1	1159,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr3	57089981	57165375	chr3:57089981-57165375	3	-	57096392	57165286	789624	13	6524,943,185,111,55,66,152,45,121,119,126,58,215,	0,7614,11197,12497,13109,14360,15875,16128,19555,20211,24710,30274,75179,
#Partially deleted in new
chr3	57094249	57170306	chr3:57094249-57170306	1	-	57096392	57109654	789624	14	2256,943,185,111,55,66,152,45,121,119,126,58,163,74,	0,3346,6929,8229,8841,10092,11607,11860,15287,15943,20442,26006,74982,75983,
#Partially deleted in new
chr3	57096177	57142491	chr3:57096177-57142491	1	-	57096392	57109654	789624	13	328,943,185,111,55,66,152,45,121,119,126,58,39,	0,1418,5001,6301,6913,8164,9679,9932,13359,14015,18514,24078,46275,
#Partially deleted in new
chr3	57096180	57142491	chr3:57096180-57142491	1	-	57096392	57109654	789624	13	325,943,185,111,55,66,152,45,121,119,126,58,39,	0,1415,4998,6298,6910,8161,9676,9929,13356,14012,18511,24075,46272,
#Partially deleted in new
chr3	57097472	57170295	chr3:57097472-57170295	0	-	57097472	57097472	8553170	12	1066,185,111,55,66,152,45,121,119,126,58,63,	0,3706,5006,5618,6869,8384,8637,12064,12720,17219,22783,72760,
#Partially deleted in new
chr3	57105951	57170295	chr3:57105951-57170295	0	-	57105951	57109654	789624	7	57,45,121,119,126,58,63,	0,158,3585,4241,8740,14304,64281,
#Partially deleted in new
chr3	57114740	57165375	chr3:57114740-57165375	0	-	57114740	57114740	8553170	3	77,58,450,	0,5515,50185,
#Deleted in new
chr3	57134141	57134723	chr3:57134141-57134723	7	+	57134141	57134141	16724991	1	582,	0,
#Partially deleted in new
chr3	57150289	57165178	chr3:57150289-57165178	0	-	57150289	57150289	8553170	2	207,253,	0,14636,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	57197837	57227606	chr3:57197837-57227606	3	-	57198196	57199918	789624	7	458,102,200,267,168,41,72,	0,553,915,1924,13497,28458,29697,
#Partially deleted in new
chr3	57197842	57199987	chr3:57197842-57199987	1	-	57198196	57199918	0	4	453,102,200,226,	0,548,910,1919,
#Partially deleted in new
chr3	57197915	57199938	chr3:57197915-57199938	1	-	57198196	57199918	789624	3	380,200,177,	0,837,1846,
#Partially deleted in new
chr3	57198788	57226521	chr3:57198788-57226521	0	-	57198788	57199918	789624	3	164,267,226,	0,973,27507,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr3	57227725	57278105	chr3:57227725-57278105	0	+	57227883	57269687	8553170	24	212,99,60,72,88,42,59,147,83,159,189,43,57,95,183,53,175,37,147,51,90,211,156,313,	0,7840,9766,10319,12739,14375,15130,18350,19669,20467,21634,24543,25956,29231,29520,31302,32119,32391,32902,40016,40672,41815,48578,50067,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr3	57227736	57273468	chr3:57227736-57273468	3	+	57227883	57269687	0	22	201,99,60,72,88,42,59,147,83,159,189,43,57,95,183,53,175,37,147,51,90,3928,	0,7829,9755,10308,12728,14364,15119,18339,19658,20456,21623,24532,25945,29220,29509,31291,32108,32380,32891,40005,40661,41804,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr3	57227788	57268021	chr3:57227788-57268021	0	+	57227788	57227788	8553170	20	149,99,60,72,88,42,59,147,83,159,189,43,57,95,183,53,175,37,147,280,	0,7777,9703,10256,12676,14312,15067,18287,19606,20404,21571,24480,25893,29168,29457,31239,32056,32328,32839,39953,
#Partially deleted in new
chr3	57227830	57242142	chr3:57227830-57242142	0	+	57227883	57242142	789624	5	107,99,60,88,42,	0,7735,9661,12634,14270,
#Partially deleted in new
chr3	57227838	57238205	chr3:57227838-57238205	0	+	57227838	57227838	8553170	4	99,99,60,161,	0,7727,9653,10206,
#Partially deleted in new
chr3	57227873	57242892	chr3:57227873-57242892	0	+	57230764	57242892	789624	8	64,54,99,60,72,88,42,37,	0,2840,7692,9618,10171,12591,14227,14982,
#Partially deleted in new
chr3	57253681	57260439	chr3:57253681-57260439	0	+	57253681	57253681	8553170	6	57,95,183,53,175,323,	0,3275,3564,5346,6163,6435,
#Partially deleted in new
chr3	57258762	57267792	chr3:57258762-57267792	0	+	57258762	57258762	8553170	5	318,175,37,147,51,	0,1082,1354,1865,8979,
#Deleted in new
chr3	57259792	57260434	chr3:57259792-57260434	0	+	57259792	57259792	8553170	2	227,318,	0,324,
#Partially deleted in new
chr3	57268346	57292682	chr3:57268346-57292682	3	-	57276549	57292033	789624	11	1272,201,154,544,172,246,159,132,56,193,50,	0,8181,9420,10030,11955,14847,19554,19808,20721,23565,24286,
#Partially deleted in new
chr3	57276549	57278952	chr3:57276549-57278952	0	-	57276549	57276549	8553170	3	179,154,576,	0,1217,1827,
#Partially deleted in new
chr3	57293698	57544344	chr3:57293698-57544344	1	-	57293780	57542870	789624	59	273,68,92,138,205,104,189,234,138,141,254,151,145,159,141,38,193,179,300,256,167,139,152,212,126,172,84,141,184,110,120,246,240,153,173,157,120,283,122,195,201,149,212,194,135,126,136,179,92,157,189,196,159,73,190,27,82,203,148,	0,1826,2645,3148,8036,15452,15967,17018,20795,28644,29308,29770,40766,41083,58386,108693,109610,111270,111954,114581,120047,121727,125668,127819,134640,134951,135992,139668,139946,143252,150998,151475,152332,152838,159144,159548,161076,164022,164400,165893,167790,168991,175069,176744,177773,178847,189677,195810,207622,208624,210317,213944,214683,215441,217091,229884,230104,249002,250498,
#Partially deleted in new
chr3	57293698	57544344	chr3:57293698-57544344	3	-	57293780	57542870	789624	74	273,68,92,138,205,104,189,234,138,141,254,151,145,159,141,173,193,193,215,146,148,242,141,90,132,177,81,163,134,195,162,193,179,300,256,167,139,152,189,120,189,84,141,184,110,120,246,240,153,173,157,120,283,122,195,201,186,244,194,135,126,136,179,92,157,189,196,159,73,190,27,82,203,148,	0,1826,2645,3148,8036,15452,15967,17018,20795,28644,29308,29770,40766,41083,58386,63477,69895,73030,74347,81672,82119,83282,85459,86579,88563,91130,91650,92742,93387,98173,100472,109610,111270,111954,114581,120047,121727,125668,127819,131323,134934,135992,139668,139946,143252,150998,151475,152332,152838,159144,159548,161076,164022,164400,165893,167790,168991,175037,176744,177773,178847,189677,195810,207622,208624,210317,213944,214683,215441,217091,229884,230104,249002,250498,
#Partially deleted in new
chr3	57293699	57297308	chr3:57293699-57297308	0	-	57293699	57293699	8553170	5	272,68,92,138,176,	0,1825,2644,3147,3433,
#Partially deleted in new
chr3	57293699	57309245	chr3:57293699-57309245	0	-	57296914	57309245	789624	5	272,68,92,138,95,	0,1825,2644,3147,15451,
#Partially deleted in new
chr3	57293703	57297151	chr3:57293703-57297151	0	-	57293703	57293703	8553170	4	268,68,92,305,	0,1821,2640,3143,
#Partially deleted in new
chr3	57293748	57357185	chr3:57293748-57357185	0	-	57293780	57357185	789624	15	223,68,92,138,205,104,189,234,141,254,151,145,159,141,10,	0,1776,2595,3098,7986,15402,15917,16968,28594,29258,29720,40716,41033,58336,63427,
#Partially deleted in new
chr3	57468652	57544344	chr3:57468652-57544344	1	-	57468729	57542870	789624	17	327,194,135,126,136,179,92,157,189,196,159,73,190,27,82,203,148,	0,1790,2819,3893,14723,20856,32668,33670,35363,38990,39729,40487,42137,54930,55150,74048,75544,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	57493666	57493780	chr3:57493666-57493780	3	+	57493666	57493666	8553170	1	114,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	57498003	57544341	chr3:57498003-57544341	0	-	57498003	57498003	8553170	12	535,92,157,189,196,159,73,190,27,82,203,145,	0,3317,4319,6012,9639,10378,11136,12786,25579,25799,44697,46193,
#Partially deleted in new
chr3	57519668	57520010	chr3:57519668-57520010	7	-	57519668	57519668	16724991	1	342,	0,
#Partially deleted in new
chr3	57530344	57530967	chr3:57530344-57530967	7	-	57530344	57530344	16724991	1	623,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	57536251	57536358	chr3:57536251-57536358	3	-	57536251	57536251	8553170	1	107,	0,
#Partially deleted in new
chr3	57548837	57548945	chr3:57548837-57548945	3	+	57548837	57548837	8553170	1	108,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	57556275	57560937	chr3:57556275-57560937	1	+	57556379	57559420	789624	2	1412,1628,	0,3034,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	57556276	57566844	chr3:57556276-57566844	3	+	57556379	57560004	0	3	1411,79,7283,	0,3033,3285,
#Partially deleted in new
chr3	57571362	57597408	chr3:57571362-57597408	3	-	57572211	57597140	0	6	936,126,72,110,81,335,	0,4185,5953,12535,13021,25711,
#Partially deleted in new
chr3	57571391	57597325	chr3:57571391-57597325	1	-	57572211	57597140	789624	5	907,126,72,110,252,	0,4156,5924,12506,25682,
#Partially deleted in new
chr3	57571397	57597334	chr3:57571397-57597334	1	-	57572211	57577318	789624	4	901,126,72,261,	0,4150,5918,25676,
#Partially deleted in new
chr3	57571404	57597366	chr3:57571404-57597366	0	-	57584000	57597140	789624	6	894,126,72,135,81,293,	0,4143,5911,12493,12979,25669,
#Partially deleted in new
chr3	57575547	57597198	chr3:57575547-57597198	0	-	57575547	57575547	8553170	4	126,72,81,125,	0,1768,8836,21526,
#Partially deleted in new
chr3	57575622	57597508	chr3:57575622-57597508	0	-	57575622	57597140	789624	6	51,72,110,81,150,177,	0,1693,8275,8761,21451,21709,
#Partially deleted in new
chr3	57583924	57597404	chr3:57583924-57597404	0	-	57583924	57583924	8553170	3	136,81,331,	0,459,13149,
#Deleted in new
chr3	57596605	57597368	chr3:57596605-57597368	0	-	57596605	57596605	8553170	2	200,295,	0,468,
#Deleted in new
chr3	57597073	57598220	chr3:57597073-57598220	0	-	57597073	57597140	789624	2	150,582,	0,565,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	57597714	57600920	chr3:57597714-57600920	0	+	57597714	57597714	8553170	3	38,111,178,	0,2344,3028,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	57597788	57600916	chr3:57597788-57600916	0	+	57597788	57597788	789624	2	263,174,	0,2954,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	57597795	57600927	chr3:57597795-57600927	3	+	57597795	57597795	789624	3	256,111,185,	0,2263,2947,
#Partially deleted in new
chr3	57619446	57619572	chr3:57619446-57619572	3	+	57619446	57619446	8553170	1	126,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr3	57625456	57693089	chr3:57625456-57693089	3	-	57628213	57693018	789624	20	2889,75,103,110,54,90,65,66,95,96,123,56,63,80,106,81,113,43,39,308,	0,3354,4964,5258,5468,7808,9101,9247,16196,20204,20859,32223,33661,35303,35989,38179,40666,46799,46943,67325,
#Partially deleted in new
chr3	57628809	57654918	chr3:57628809-57654918	3	+	57628809	57628809	8553170	2	69,295,	0,25814,
#Partially deleted in new
chr3	57630348	57633331	chr3:57630348-57633331	0	-	57630378	57633331	789624	4	175,110,54,67,	0,366,576,2916,
#Deleted in new
chr3	57630738	57631184	chr3:57630738-57631184	0	-	57630738	57630738	8553170	2	86,260,	0,186,
#Partially deleted in new
chr3	57634703	57660826	chr3:57634703-57660826	0	-	57634703	57660826	789624	6	66,95,96,123,56,67,	0,6949,10957,11612,22976,26056,
#Partially deleted in new
chr3	57657650	57666194	chr3:57657650-57666194	0	-	57657650	57657650	8553170	6	85,63,80,106,81,72,	0,1467,3109,3795,5985,8472,
#Partially deleted in new
chr3	57665960	57692844	chr3:57665960-57692844	0	-	57665960	57665960	8553170	4	275,43,39,63,	0,6295,6439,26821,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	57693204	57696596	chr3:57693204-57696596	3	+	57693204	57693204	789624	2	138,2781,	0,611,
#Deleted in new
chr3	57755449	57757067	chr3:57755449-57757067	0	+	57755449	57755449	8553170	2	36,520,	0,1098,
#Partially deleted in new
chr3	57756229	57929168	chr3:57756229-57929168	3	+	57757651	57927388	789624	22	113,1302,148,73,37,63,96,72,141,138,169,63,60,81,60,123,75,321,118,172,135,1873,	0,318,75153,85069,90967,93524,101503,101858,104469,105719,108318,115406,133811,140281,140643,151654,152846,156151,156928,160676,166659,171066,
#Partially deleted in new
chr3	57757300	57891206	chr3:57757300-57891206	0	+	57757300	57757300	8553170	12	549,148,73,37,63,96,72,141,138,169,51,1161,	0,74082,83998,89896,92453,100432,100787,103398,104648,107247,107506,132745,
#Partially deleted in new
chr3	57757446	57929167	chr3:57757446-57929167	1	+	57757651	57927388	789624	21	403,148,73,37,63,96,72,141,138,169,63,60,81,60,123,75,321,118,172,135,1872,	0,73936,83852,89750,92307,100286,100641,103252,104502,107101,114189,132594,139064,139426,150437,151629,154934,155711,159459,165442,169849,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	57757553	57902145	chr3:57757553-57902145	1	+	57757651	57897015	789624	15	296,148,73,37,63,96,72,141,138,169,51,51,60,81,5273,	0,73829,83745,89643,92200,100179,100534,103145,104395,106994,107253,107688,132487,138957,139319,
#Partially deleted in new
chr3	57757557	57928939	chr3:57757557-57928939	1	+	57757651	57927388	789624	22	292,148,73,37,63,96,72,141,138,169,51,63,60,81,60,123,75,321,118,172,135,1644,	0,73825,83741,89639,92196,100175,100530,103141,104391,106990,107249,114078,132483,138953,139315,150326,151518,154823,155600,159348,165331,169738,
#Partially deleted in new
chr3	57757557	57928948	chr3:57757557-57928948	1	+	57757651	57927388	789624	20	292,148,73,37,63,96,72,141,138,169,60,81,60,123,75,321,118,172,135,1653,	0,73825,83741,89639,92196,100175,100530,103141,104391,106990,132483,138953,139315,150326,151518,154823,155600,159348,165331,169738,
#Partially deleted in new
chr3	57800055	57801448	chr3:57800055-57801448	7	-	57800055	57800055	16724991	2	91,979,	0,414,
#Partially deleted in new
chr3	57861999	57896591	chr3:57861999-57896591	0	+	57861999	57896591	789624	6	87,169,51,63,60,81,	0,2548,3242,9636,28041,34511,
#Partially deleted in new
chr3	57864556	57896590	chr3:57864556-57896590	0	+	57864556	57864556	8553170	4	160,51,60,80,	0,685,25484,31954,
#Partially deleted in new
chr3	57864585	57927559	chr3:57864585-57927559	0	+	57864585	57925928	789624	11	131,81,60,123,75,321,118,172,135,90,264,	0,31925,32287,43298,44490,47795,48572,52320,58303,61259,62710,
#Partially deleted in new
chr3	57889990	57912518	chr3:57889990-57912518	0	+	57889990	57889990	8553170	6	110,73,60,123,75,138,	0,6528,6882,17893,19085,22390,
#Partially deleted in new
chr3	57889990	57912688	chr3:57889990-57912688	0	+	57889990	57889990	8553170	4	110,81,60,308,	0,6520,6882,22390,
#Partially deleted in new
chr3	57890040	57929126	chr3:57890040-57929126	0	+	57890040	57925928	789624	11	60,81,60,123,75,321,118,172,135,90,1831,	0,6470,6832,17843,19035,22340,23117,26865,32848,35804,37255,
#Partially deleted in new
chr3	57890056	57918480	chr3:57890056-57918480	0	+	57890056	57917155	789624	7	44,81,60,75,321,118,1575,	0,6454,6816,19019,22324,23101,26849,
#Partially deleted in new
chr3	57896238	57927460	chr3:57896238-57927460	1	+	57896880	57927388	789624	10	133,81,60,123,75,321,118,172,135,165,	0,272,634,11645,12837,16142,16919,20667,26650,31057,
#Partially deleted in new
chr3	57896309	57927486	chr3:57896309-57927486	1	+	57896880	57925928	789624	10	62,81,60,75,321,118,172,135,90,191,	0,201,563,12766,16071,16848,20596,26579,29535,30986,
#Partially deleted in new
chr3	57896339	57912435	chr3:57896339-57912435	0	+	57896880	57912435	789624	5	252,60,123,75,55,	0,533,11544,12736,16041,
#Partially deleted in new
chr3	57896340	57912581	chr3:57896340-57912581	0	+	57896880	57912581	789624	4	251,60,75,201,	0,532,12735,16040,
#Partially deleted in new
chr3	57912294	57916971	chr3:57912294-57916971	0	+	57912294	57912294	8553170	3	407,118,66,	0,863,4611,
#Partially deleted in new
chr3	57916964	57927947	chr3:57916964-57927947	0	+	57916964	57925928	789624	3	113,90,652,	0,8880,10331,
#Partially deleted in new
chr3	57916980	57926290	chr3:57916980-57926290	0	+	57916980	57916980	8553170	3	97,135,446,	0,5908,8864,
#Deleted in new
chr3	57941817	57942304	chr3:57941817-57942304	7	+	57941817	57941817	16724991	1	487,	0,
#Partially deleted in new
chr3	58008399	58172251	chr3:58008399-58172251	3	+	58008564	58170762	0	46	457,249,98,148,119,78,163,198,138,127,137,194,114,144,124,161,91,170,118,263,598,174,163,161,168,124,157,190,248,72,103,141,129,174,159,204,153,123,267,138,116,133,177,219,204,1677,	0,68646,70317,73229,86436,87741,89415,90311,93803,95559,96680,98280,100058,100779,101176,101610,103391,103749,110472,112841,114693,115932,117181,118202,122341,124408,126216,127579,129882,133458,134250,135073,137521,138420,139806,140249,141450,141705,144975,146391,147560,151154,154754,160040,161190,162175,
#Partially deleted in new
chr3	58008399	58172251	chr3:58008399-58172251	1	+	58008564	58170762	0	45	457,249,98,148,119,78,163,198,138,127,137,194,114,144,124,161,91,170,118,263,598,174,163,161,168,124,157,190,248,103,141,129,174,159,204,153,123,267,138,116,133,177,219,204,1677,	0,68646,70317,73229,86436,87741,89415,90311,93803,95559,96680,98280,100058,100779,101176,101610,103391,103749,110472,112841,114693,115932,117181,118202,122341,124408,126216,127579,129882,134250,135073,137521,138420,139806,140249,141450,141705,144975,146391,147560,151154,154754,160040,161190,162175,
#Partially deleted in new
chr3	58008399	58172251	chr3:58008399-58172251	1	+	58008564	58170762	0	46	457,249,98,148,119,78,163,198,138,127,137,194,114,144,124,161,91,170,118,263,598,174,163,161,168,124,157,190,248,39,103,141,129,174,159,204,153,123,267,138,116,133,177,219,204,1677,	0,68646,70317,73229,86436,87741,89415,90311,93803,95559,96680,98280,100058,100779,101176,101610,103391,103749,110472,112841,114693,115932,117181,118202,122341,124408,126216,127579,129882,133458,134250,135073,137521,138420,139806,140249,141450,141705,144975,146391,147560,151154,154754,160040,161190,162175,
#Partially deleted in new
chr3	58008399	58170774	chr3:58008399-58170774	1	+	58008564	58170762	0	47	457,249,98,148,119,78,163,198,138,127,137,194,114,144,124,161,91,170,118,263,598,174,163,161,168,93,124,157,190,248,72,103,141,129,174,159,204,153,123,267,138,116,133,177,219,204,200,	0,68646,70317,73229,86436,87741,89415,90311,93803,95559,96680,98280,100058,100779,101176,101610,103391,103749,110472,112841,114693,115932,117181,118202,122341,123527,124408,126216,127579,129882,133458,134250,135073,137521,138420,139806,140249,141450,141705,144975,146391,147560,151154,154754,160040,161190,162175,
#Partially deleted in new
chr3	58078328	58170777	chr3:58078328-58170777	1	+	58078485	58170762	789624	44	191,98,148,119,78,163,198,138,127,137,194,114,144,124,161,91,170,118,263,598,174,163,161,168,124,157,190,248,103,141,129,174,159,204,153,123,267,138,116,133,177,219,204,203,	0,388,3300,16507,17812,19486,20382,23874,25630,26751,28351,30129,30850,31247,31681,33462,33820,40543,42912,44764,46003,47252,48273,52412,54479,56287,57650,59953,64321,65144,67592,68491,69877,70320,71521,71776,75046,76462,77631,81225,84825,90111,91261,92246,
#Partially deleted in new
chr3	58132077	58172251	chr3:58132077-58172251	0	+	58132077	58132077	8553170	19	854,157,190,248,103,141,129,174,159,204,153,123,267,138,116,133,177,1354,1677,	0,2538,3901,6204,10572,11395,13843,14742,16128,16571,17772,18027,21297,22713,23882,27476,31076,36362,38497,
#Partially deleted in new
chr3	58146677	58148364	chr3:58146677-58148364	0	+	58146677	58146677	8553170	2	316,159,	0,1528,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	58149231	58151391	chr3:58149231-58151391	0	+	58149231	58149231	8553170	2	771,1287,	0,873,
#Partially deleted in new
chr3	58149865	58153641	chr3:58149865-58153641	0	+	58149865	58153641	789624	2	137,267,	0,3509,
#Partially deleted in new
chr3	58149980	58153397	chr3:58149980-58153397	0	+	58149980	58152781	789624	4	22,123,147,23,	0,124,2727,3394,
#Partially deleted in new
chr3	58154609	58159691	chr3:58154609-58159691	0	+	58154609	58154609	8553170	3	319,116,138,	0,1350,4944,
#Partially deleted in new
chr3	58156026	58163512	chr3:58156026-58163512	0	+	58156026	58156026	8553170	3	49,133,359,	0,3527,7127,
#Partially deleted in new
chr3	58162546	58170636	chr3:58162546-58170636	3	-	58162546	58162546	789624	2	3569,140,	0,7950,
#Deleted in new
chr3	58163972	58165314	chr3:58163972-58165314	0	-	58163972	58163972	8553170	2	340,231,	0,1111,
#Partially deleted in new
chr3	58165475	58170978	chr3:58165475-58170978	0	+	58165475	58165475	8553170	4	105,219,204,404,	0,2964,4114,5099,
#Deleted in new
chr3	58168455	58172170	chr3:58168455-58172170	1	+	58168561	58170862	789624	4	203,204,140,1455,	0,1134,2119,2260,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	58174477	58178374	chr3:58174477-58178374	3	-	58174477	58174477	8553170	3	498,212,135,	0,1347,3762,
#Partially deleted in new
chr3	58180008	58183978	chr3:58180008-58183978	7	+	58180008	58180008	16724991	2	513,107,	0,3863,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	58183687	58187495	chr3:58183687-58187495	5	+	58183687	58183687	16724991	3	299,96,751,	0,2285,3057,
#Partially deleted in new
chr3	58192256	58210969	chr3:58192256-58210969	1	-	58192686	58210906	789624	7	547,97,158,113,113,89,204,	0,1086,5564,8740,12512,15961,18509,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	58192626	58214697	chr3:58192626-58214697	1	-	58193276	58210906	789624	9	813,158,113,113,90,89,238,89,396,	0,5194,8370,12142,12844,15591,18139,21481,21675,
#Partially deleted in new
chr3	58192627	58211223	chr3:58192627-58211223	3	-	58192686	58210906	789624	8	176,97,158,113,113,90,89,458,	0,715,5193,8369,12141,12843,15590,18138,
#Partially deleted in new
chr3	58192627	58204823	chr3:58192627-58204823	0	-	58192715	58204823	789624	4	176,158,113,55,	0,5193,8369,12141,
#Partially deleted in new
chr3	58201069	58211224	chr3:58201069-58211224	0	-	58201069	58210906	789624	6	40,113,90,89,238,65,	0,3699,4401,7148,9696,10090,
#Partially deleted in new
chr3	58205489	58214671	chr3:58205489-58214671	0	-	58205489	58210906	789624	5	71,89,167,89,370,	0,2728,5276,8618,8812,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	58207759	58210920	chr3:58207759-58210920	0	-	58207759	58207759	8553170	2	547,155,	0,3006,
#Partially deleted in new
chr3	58237505	58294732	chr3:58237505-58294732	3	+	58256586	58293765	789624	10	411,65,144,157,114,133,158,55,101,1144,	0,12372,19056,29683,31815,33426,37152,47579,47847,56083,
#Partially deleted in new
chr3	58237531	58294734	chr3:58237531-58294734	1	+	58256586	58293765	789624	9	385,144,157,114,133,158,55,101,1146,	0,19030,29657,31789,33400,37126,47553,47821,56057,
#Partially deleted in new
chr3	58237846	58267345	chr3:58237846-58267345	0	+	58256586	58258439	789624	4	70,144,222,157,	0,18715,20556,29342,
#Partially deleted in new
chr3	58238027	58274809	chr3:58238027-58274809	0	+	58256586	58274809	789624	7	156,65,144,157,114,133,152,	0,11850,18534,29161,31293,32904,36630,
#Partially deleted in new
chr3	58238421	58271061	chr3:58238421-58271061	0	+	58256586	58271061	789624	5	223,144,157,114,130,	0,18140,28767,30899,32510,
#Partially deleted in new
chr3	58285196	58293658	chr3:58285196-58293658	0	+	58285196	58285196	8553170	2	257,70,	0,8392,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	58294362	58295693	chr3:58294362-58295693	0	+	58294362	58294362	8553170	2	38,348,	0,983,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	58306261	58324695	chr3:58306261-58324695	3	+	58310329	58317496	789624	6	390,98,85,77,79,7256,	0,4047,4245,10253,10653,11178,
#Partially deleted in new
chr3	58306261	58317775	chr3:58306261-58317775	0	+	58317613	58317775	789624	4	156,77,79,336,	0,10253,10653,11178,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	58306271	58318484	chr3:58306271-58318484	3	+	58317613	58318120	0	6	146,85,82,94,79,1045,	0,4235,9450,10226,10643,11168,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	58306274	58320078	chr3:58306274-58320078	1	+	58310329	58317496	789624	6	143,98,85,77,79,2639,	0,4034,4232,10240,10640,11165,
#Partially deleted in new
chr3	58306309	58317778	chr3:58306309-58317778	1	+	58310329	58317496	789624	6	108,117,85,77,79,339,	0,3980,4197,10205,10605,11130,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	58306313	58318472	chr3:58306313-58318472	1	+	58317613	58318120	0	5	104,85,77,79,1033,	0,4193,10201,10601,11126,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	58306519	58318574	chr3:58306519-58318574	1	+	58317613	58318120	0	5	132,85,77,79,1135,	0,3987,9995,10395,10920,
#Partially deleted in new
chr3	58307762	58317828	chr3:58307762-58317828	0	+	58317613	58317828	789624	5	217,85,77,79,389,	0,2744,8752,9152,9677,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	58310053	58317503	chr3:58310053-58317503	0	+	58310053	58310053	8553170	5	353,85,77,79,64,	0,453,6461,6861,7386,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	58318522	58319509	chr3:58318522-58319509	0	+	58318522	58318522	8553170	2	53,741,	0,246,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	58329964	58330118	chr3:58329964-58330118	3	+	58329964	58329964	8553170	1	154,	0,
#Partially deleted in new
chr3	58332879	58425151	chr3:58332879-58425151	1	+	58332988	58424960	789624	17	211,51,48,187,78,74,75,105,102,162,118,79,49,78,87,70,400,	0,32994,36551,49634,57702,58267,58893,62118,62778,64159,64725,66419,70982,76044,76652,77210,91872,
#Partially deleted in new
chr3	58332879	58425151	chr3:58332879-58425151	3	+	58332988	58424960	789624	18	211,51,48,187,78,74,75,105,102,162,118,79,49,78,87,70,63,400,	0,32994,36551,49634,57702,58267,58893,62118,62778,64159,64725,66419,70982,76044,76652,77210,80021,91872,
#Partially deleted in new
chr3	58332884	58425058	chr3:58332884-58425058	0	+	58332988	58390650	789624	15	206,78,74,75,105,102,162,118,79,49,78,87,70,63,307,	0,57697,58262,58888,62113,62773,64154,64720,66414,70977,76039,76647,77205,80016,91867,
#Partially deleted in new
chr3	58332889	58426126	chr3:58332889-58426126	1	+	58332988	58420555	789624	19	201,51,48,187,78,74,75,105,102,162,118,79,49,78,87,70,63,33,1375,	0,32984,36541,49624,57692,58257,58883,62108,62768,64149,64715,66409,70972,76034,76642,77200,80011,87646,91862,
#Partially deleted in new
chr3	58332897	58426023	chr3:58332897-58426023	1	+	58332988	58420555	789624	17	193,187,78,74,75,105,102,162,118,79,49,78,87,70,63,33,1272,	0,49616,57684,58249,58875,62100,62760,64141,64707,66401,70964,76026,76634,77192,80003,87638,91854,
#Partially deleted in new
chr3	58332902	58420728	chr3:58332902-58420728	1	+	58332988	58420555	789624	17	188,48,187,78,74,75,105,102,162,118,79,49,78,87,70,63,193,	0,36528,49611,57679,58244,58870,62095,62755,64136,64702,66396,70959,76021,76629,77187,79998,87633,
#Partially deleted in new
chr3	58332910	58420960	chr3:58332910-58420960	1	+	58332988	58420555	789624	18	180,51,48,187,78,74,75,105,102,162,118,79,49,78,87,70,63,425,	0,32963,36520,49603,57671,58236,58862,62087,62747,64128,64694,66388,70951,76013,76621,77179,79990,87625,
#Partially deleted in new
chr3	58332947	58426019	chr3:58332947-58426019	1	+	58332988	58424935	789624	18	143,48,187,78,74,75,105,102,162,118,79,49,78,87,70,60,34,1268,	0,36483,49566,57634,58199,58825,62050,62710,64091,64657,66351,70914,75976,76584,77142,79956,90513,91804,
#Partially deleted in new
chr3	58332986	58425058	chr3:58332986-58425058	0	+	58332988	58395035	789624	15	104,51,48,187,105,102,162,118,79,49,78,87,70,63,307,	0,32887,36444,49527,62011,62671,64052,64618,66312,70875,75937,76545,77103,79914,91765,
#Partially deleted in new
chr3	58333305	58382678	chr3:58333305-58382678	0	+	58333549	58382678	789624	4	319,51,48,165,	0,32568,36125,49208,
#Partially deleted in new
chr3	58379216	58379525	chr3:58379216-58379525	7	-	58379216	58379216	16724991	1	309,	0,
#Partially deleted in new
chr3	58395673	58425874	chr3:58395673-58425874	0	+	58395673	58424960	789624	9	86,162,118,79,49,78,87,70,1123,	0,1365,1931,3625,8188,13250,13858,14416,29078,
#Partially deleted in new
chr3	58397137	58414527	chr3:58397137-58414527	0	+	58397137	58412968	789624	8	63,118,79,49,78,87,70,1627,	0,467,2161,6724,11786,12394,12952,15763,
#Partially deleted in new
chr3	58408978	58420735	chr3:58408978-58420735	0	+	58408978	58420555	789624	5	23,87,70,60,197,	0,553,1111,3925,11560,
#Partially deleted in new
chr3	58409615	58425175	chr3:58409615-58425175	0	+	58409615	58420555	789624	5	3,70,60,33,424,	0,474,3288,10920,15136,
#Partially deleted in new
chr3	58427629	58433852	chr3:58427629-58433852	3	-	58428033	58433809	0	10	550,142,92,111,286,36,63,108,54,85,	0,843,2078,2498,3027,3963,4101,4247,6001,6138,
#Partially deleted in new
chr3	58427629	58433857	chr3:58427629-58433857	1	-	58428033	58433809	0	9	550,142,92,111,286,36,63,108,90,	0,843,2078,2498,3027,3963,4101,4247,6138,
#Partially deleted in new
chr3	58427650	58433820	chr3:58427650-58433820	0	-	58429885	58433809	789624	10	529,142,234,111,286,36,63,108,54,53,	0,822,2057,2477,3006,3942,4080,4226,5980,6117,
#Partially deleted in new
chr3	58427671	58433818	chr3:58427671-58433818	1	-	58428033	58433809	0	11	508,142,92,111,132,100,36,63,108,54,51,	0,801,2036,2456,2985,3171,3921,4059,4205,5959,6096,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	58427680	58433816	chr3:58427680-58433816	0	-	58427680	58427680	8553170	5	934,531,1137,1808,49,	0,2027,2976,4196,6087,
#Partially deleted in new
chr3	58427682	58433814	chr3:58427682-58433814	1	-	58428127	58433809	789624	9	497,263,92,111,286,36,63,108,47,	0,669,2025,2445,2974,3910,4048,4194,6085,
#Partially deleted in new
chr3	58427691	58433839	chr3:58427691-58433839	0	-	58427691	58427691	789624	9	488,142,92,111,286,36,63,108,209,	0,781,2016,2436,2965,3901,4039,4185,5939,
#Deleted in new
chr3	58428254	58428815	chr3:58428254-58428815	3	+	58428254	58428254	8553170	1	561,	0,
#Partially deleted in new
chr3	58430209	58433818	chr3:58430209-58433818	0	-	58430209	58430209	8553170	6	29,286,36,254,54,51,	0,447,1383,1521,3421,3558,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	58431333	58433828	chr3:58431333-58433828	0	-	58431333	58431333	8553170	5	295,63,108,54,61,	0,397,543,2297,2434,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	58431431	58433829	chr3:58431431-58433829	0	-	58431431	58431431	8553170	4	362,108,54,62,	0,445,2199,2336,
#Deleted in new
chr3	58490829	58491291	chr3:58490829-58491291	3	-	58490829	58490829	8553170	1	462,	0,
#Partially deleted in new
chr3	58492113	58502352	chr3:58492113-58502352	3	+	58498755	58501632	789624	3	56,70,1407,	0,6599,8832,
#Partially deleted in new
chr3	58492118	58502327	chr3:58492118-58502327	1	+	58498755	58501632	789624	4	51,256,70,1382,	0,2034,6594,8827,
#Partially deleted in new
chr3	58493914	58498782	chr3:58493914-58498782	0	+	58498755	58498782	789624	2	494,70,	0,4798,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	58497772	58502360	chr3:58497772-58502360	1	+	58498755	58501632	789624	2	1010,1415,	0,3173,
#Partially deleted in new
chr3	58498427	58501092	chr3:58498427-58501092	0	+	58498427	58498427	8553170	2	355,119,	0,2546,
#Partially deleted in new
chr3	58505135	58537319	chr3:58505135-58537319	3	-	58505223	58535106	789624	15	151,133,218,106,180,191,163,173,116,120,108,152,163,251,201,	0,3757,12070,17360,19290,21330,23658,25330,26115,26557,28309,28858,29224,29811,31983,
#Partially deleted in new
chr3	58505135	58537283	chr3:58505135-58537283	1	-	58505223	58535106	789624	15	151,133,218,106,180,191,163,173,74,120,108,152,163,251,165,	0,3757,12070,17360,19290,21330,23658,25330,26157,26557,28309,28858,29224,29811,31983,
#Partially deleted in new
chr3	58505135	58526749	chr3:58505135-58526749	0	-	58505135	58505135	8553170	6	151,133,218,106,180,284,	0,3757,12070,17360,19290,21330,
#Partially deleted in new
chr3	58505135	58522987	chr3:58505135-58522987	0	-	58505135	58505135	8553170	5	151,133,218,106,34,	0,3757,12070,17360,17818,
#Partially deleted in new
chr3	58505137	58517387	chr3:58505137-58517387	0	-	58509001	58517387	789624	4	149,133,76,182,	0,3755,5841,12068,
#Deleted in new
chr3	58511309	58511676	chr3:58511309-58511676	7	+	58511309	58511309	16724991	1	367,	0,
#Partially deleted in new
chr3	58524461	58533553	chr3:58524461-58533553	0	-	58531297	58533553	789624	6	144,191,163,142,120,109,	0,2004,4332,6789,7231,8983,
#Partially deleted in new
chr3	58526504	58529206	chr3:58526504-58529206	0	-	58526504	58526504	8553170	2	152,413,	0,2289,
#Partially deleted in new
chr3	58531309	58533825	chr3:58531309-58533825	0	-	58531309	58531309	8553170	3	57,120,381,	0,383,2135,
#Partially deleted in new
chr3	58531320	58534979	chr3:58531320-58534979	0	-	58534600	58534979	789624	6	46,120,108,152,119,33,	0,372,2124,2673,3169,3626,
#Partially deleted in new
chr3	58533513	58537178	chr3:58533513-58537178	0	-	58533513	58535106	789624	5	39,152,163,294,60,	0,480,846,1433,3605,
#Partially deleted in new
chr3	58534057	58537172	chr3:58534057-58537172	0	-	58534057	58534057	8553170	4	88,33,251,54,	0,518,889,3061,
#Partially deleted in new
chr3	58534117	58537175	chr3:58534117-58537175	0	-	58534117	58534117	8553170	3	491,251,57,	0,829,3001,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	58534576	58537147	chr3:58534576-58537147	0	-	58534576	58534576	8553170	2	664,29,	0,2542,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	58564116	58577764	chr3:58564116-58577764	1	-	58566587	58569860	789624	4	2579,157,175,456,	0,3091,5574,13192,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	58564116	58577764	chr3:58564116-58577764	1	-	58566587	58569860	789624	5	2579,157,175,98,456,	0,3091,5574,6209,13192,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	58564125	58627577	chr3:58564125-58627577	3	-	58566587	58569860	789624	7	2570,157,175,98,132,64,607,	0,3082,5565,6200,13183,25080,62845,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	58565460	58577388	chr3:58565460-58577388	1	-	58567126	58569860	789624	3	1904,175,80,	0,4230,11848,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	58565460	58627610	chr3:58565460-58627610	1	-	58566587	58626994	789624	5	1235,157,175,64,640,	0,1747,4230,23745,61510,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	58565851	58587113	chr3:58565851-58587113	1	-	58566587	58586936	789624	4	844,157,175,256,	0,1356,3839,21006,
#Partially deleted in new
chr3	58567218	58627610	chr3:58567218-58627610	0	-	58567218	58569860	789624	4	146,175,64,195,	0,2472,21987,60197,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	58572743	58574319	chr3:58572743-58574319	3	+	58572743	58572743	8553170	3	47,174,129,	0,733,1447,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	58607092	58644491	chr3:58607092-58644491	3	+	58607092	58607092	8553170	4	37,264,209,782,	0,589,5848,36617,
#Partially deleted in new
chr3	58608873	58627420	chr3:58608873-58627420	0	-	58608873	58608873	8553170	2	384,450,	0,18097,
#Partially deleted in new
chr3	58633945	58666848	chr3:58633945-58666848	3	-	58634278	58655563	789624	10	423,127,85,51,59,118,24,108,51,273,	0,2348,3195,6181,9716,11563,15369,19728,21605,32630,
#Partially deleted in new
chr3	58637141	58657766	chr3:58637141-58657766	0	-	58637141	58655563	789624	8	84,51,59,118,21,108,51,245,	0,2985,6520,8367,12173,16532,18409,20380,
#Partially deleted in new
chr3	58637151	58666834	chr3:58637151-58666834	0	-	58637151	58655563	789624	7	74,51,59,118,21,51,259,	0,2975,6510,8357,12163,18399,29424,
#Partially deleted in new
chr3	58637154	58657696	chr3:58637154-58657696	0	-	58645619	58655563	789624	7	71,51,59,118,100,51,175,	0,2972,6507,8354,12160,18396,20367,
#Partially deleted in new
chr3	58643675	58657748	chr3:58643675-58657748	0	-	58643675	58655563	789624	7	45,118,24,108,51,50,53,	0,1833,5639,9998,11875,13846,14020,
#Partially deleted in new
chr3	58717364	58831725	chr3:58717364-58831725	0	-	58717587	58831725	789624	4	264,95,62,40,	0,36404,89030,114321,
#Partially deleted in new
chr3	58717366	58753843	chr3:58717366-58753843	0	-	58734553	58753843	789624	3	262,87,75,	0,17105,36402,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	58725867	58849226	chr3:58725867-58849226	0	-	58734553	58849226	789624	6	2270,87,95,62,204,195,	0,8604,27901,80527,105818,123164,
#Partially deleted in new
chr3	58727969	58753863	chr3:58727969-58753863	0	-	58737186	58753863	789624	4	168,87,69,95,	0,6502,9186,25799,
#Partially deleted in new
chr3	58742005	59050084	chr3:58742005-59050084	1	-	58742459	58937665	789624	16	567,95,62,204,335,123,120,163,137,165,157,115,73,94,90,150,	0,11763,64389,89680,121552,124560,125811,127322,128167,142539,171702,195642,297551,304223,305159,307929,
#Partially deleted in new
chr3	58742009	59050050	chr3:58742009-59050050	3	-	58742459	59049631	789624	17	563,95,62,204,378,335,123,120,163,137,165,157,115,73,94,90,440,	0,11759,64385,89676,107022,121548,124556,125807,127318,128163,142535,171698,195638,297547,304219,305155,307601,
#Partially deleted in new
chr3	58753699	59050032	chr3:58753699-59050032	0	-	58884678	59049631	789624	15	164,204,378,335,123,120,163,148,165,167,115,73,94,90,422,	0,77986,95332,109858,112866,114117,115628,116462,130845,159998,183948,285857,292529,293465,295911,
#Partially deleted in new
chr3	58753702	58831739	chr3:58753702-58831739	0	-	58794323	58831739	789624	4	161,151,62,54,	0,40477,52692,77983,
#Partially deleted in new
chr3	58824436	59017637	chr3:58824436-59017637	0	+	58824436	58824436	8553170	2	139,431,	0,192770,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	58824440	58970728	chr3:58824440-58970728	0	+	58824440	58824440	8553170	3	135,59,371,	0,90432,145917,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	58824470	58970660	chr3:58824470-58970660	1	+	58824470	58824470	8553170	4	105,95,59,303,	0,42071,90402,145887,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	58824470	59019093	chr3:58824470-59019093	3	+	58824470	58824470	789624	3	105,211,1887,	0,145887,192736,
#Partially deleted in new
chr3	58861227	59050012	chr3:58861227-59050012	1	-	58863491	58884644	789624	11	2665,123,81,163,137,165,115,73,94,90,402,	0,5338,6589,8100,8945,23317,76420,178329,185001,185937,188383,
#Partially deleted in new
chr3	58887345	59049759	chr3:58887345-59049759	0	-	58912716	59049631	789624	8	94,177,157,115,73,94,90,149,	0,25220,26362,50302,152211,158883,159819,162265,
#Partially deleted in new
chr3	58913569	59049991	chr3:58913569-59049991	1	-	58913657	58937665	789624	7	295,115,108,73,94,90,57,	0,24078,78938,125987,132659,133595,136365,
#Partially deleted in new
chr3	58953486	59046311	chr3:58953486-59046311	0	-	58953486	58953486	8553170	3	335,73,83,	0,86070,92742,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	59065149	59119509	chr3:59065149-59119509	3	+	59065149	59065149	8553170	2	117,564,	0,53796,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	59380023	59388704	chr3:59380023-59388704	3	-	59380023	59380023	8553170	3	560,102,34,	0,704,8647,
#Partially deleted in new
chr3	59464329	59510678	chr3:59464329-59510678	3	-	59464329	59464329	8553170	2	411,287,	0,46062,
#Deleted in new
chr3	59535862	59536415	chr3:59535862-59536415	7	+	59535862	59535862	16724991	1	553,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	59584168	59584445	chr3:59584168-59584445	3	+	59584168	59584168	8553170	1	277,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	59749701	60080840	chr3:59749701-60080840	0	-	59749701	59749701	789624	7	2620,68,69,30,69,157,50,	0,136518,172644,261669,264305,327668,331089,
#Partially deleted in new
chr3	59751406	61251459	chr3:59751406-61251459	1	-	59752225	60536962	0	9	915,69,30,146,120,93,53,49,159,	0,170939,259964,262600,785453,1070512,1290640,1449210,1499894,
#Partially deleted in new
chr3	60011370	60014150	chr3:60011370-60014150	1	-	60011370	60014150	789624	2	30,144,	0,2636,
#Partially deleted in new
chr3	60014019	61251413	chr3:60014019-61251413	0	-	60014019	60536962	789624	7	133,120,40,93,53,49,113,	0,522840,751504,807899,1028027,1186597,1237281,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	60535809	61251384	chr3:60535809-61251384	0	-	60535809	60535809	8553170	6	1170,93,254,70,49,84,	0,286109,629765,631163,664807,715491,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	60616821	60618079	chr3:60616821-60618079	7	+	60616821	60616821	16724991	1	1258,	0,
#Deleted in new
chr3	60690224	60690719	chr3:60690224-60690719	7	-	60690224	60690224	16724991	1	495,	0,
#Deleted in new
chr3	60730054	60730644	chr3:60730054-60730644	7	-	60730054	60730054	16724991	1	590,	0,
#Deleted in new
chr3	60732143	60732636	chr3:60732143-60732636	7	-	60732143	60732143	16724991	1	493,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	60856388	60856605	chr3:60856388-60856605	3	-	60856388	60856388	8553170	1	217,	0,
#Partially deleted in new
chr3	61244009	61251412	chr3:61244009-61251412	0	-	61244009	61244009	8553170	2	141,112,	0,7291,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	61561568	61771395	chr3:61561568-61771395	0	+	61561568	61561568	8553170	3	804,105,2102,	0,187309,207725,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	61561850	61751049	chr3:61561850-61751049	0	+	61561850	61561850	8553170	2	522,2172,	0,187027,
#Partially deleted in new
chr3	61561910	62293329	chr3:61561910-62293329	1	+	61562287	62293307	0	29	462,105,180,149,96,67,158,193,185,109,50,778,133,92,92,97,83,135,135,173,136,147,94,77,129,147,143,136,169,	0,186967,427714,441438,516252,570691,595156,606060,629558,633151,639594,641262,656940,681896,693213,700887,705499,705774,707124,709472,711035,711787,713962,715061,715640,719652,720816,730510,731250,
#Partially deleted in new
chr3	61561910	62297613	chr3:61561910-62297613	3	+	61562287	62293307	0	30	462,105,180,149,96,67,158,193,185,109,50,778,133,87,92,92,97,83,135,135,173,136,147,94,77,129,147,143,136,4453,	0,186967,427714,441438,516252,570691,595156,606060,629558,633151,639594,641262,656940,669314,681896,693213,700887,705499,705774,707124,709472,711035,711787,713962,715061,715640,719652,720816,730510,731250,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	61739126	61739229	chr3:61739126-61739229	3	-	61739126	61739126	8553170	1	103,	0,
#Deleted in new
chr3	61742454	61743106	chr3:61742454-61743106	7	-	61742454	61742454	16724991	1	652,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	62118299	62118510	chr3:62118299-62118510	3	-	62118299	62118299	8553170	1	211,	0,
#Deleted in new
chr3	62124203	62124608	chr3:62124203-62124608	7	-	62124203	62124203	16724991	1	405,	0,
#Partially deleted in new
chr3	62217582	62293551	chr3:62217582-62293551	0	+	62217582	62217582	8553170	18	295,133,92,92,97,83,135,135,173,136,147,94,77,129,147,143,136,391,	0,1268,26224,37541,45215,49827,50102,51452,53800,55363,56115,58290,59389,59968,63980,65144,74838,75578,
#Partially deleted in new
chr3	62243575	62267813	chr3:62243575-62267813	0	+	62243575	62243575	8553170	5	323,92,97,83,129,	0,11548,19222,23834,24109,
#Partially deleted in new
chr3	62243804	62263465	chr3:62243804-62263465	0	+	62243804	62243804	8553170	3	94,92,668,	0,11319,18993,
#Deleted in new
chr3	62260864	62262740	chr3:62260864-62262740	0	-	62260864	62260864	8553170	2	231,121,	0,1755,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	62261822	62318947	chr3:62261822-62318947	1	-	62261822	62261822	789624	5	2320,79,87,93,82,	0,32877,55283,55985,57043,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	62261824	62318923	chr3:62261824-62318923	0	-	62261824	62261824	789624	4	2318,87,93,58,	0,55281,55983,57041,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	62263874	62318892	chr3:62263874-62318892	3	-	62263874	62263874	8553170	6	268,104,79,87,93,102,	0,28739,30825,53231,53933,54916,
#Partially deleted in new
chr3	62276426	62318892	chr3:62276426-62318892	1	-	62276426	62276426	8553170	4	578,125,93,27,	0,40679,41381,42439,
#Partially deleted in new
chr3	62276774	62369326	chr3:62276774-62369326	0	-	62276774	62276774	8553170	4	230,87,93,135,	0,40331,41033,92417,
#Partially deleted in new
chr3	62294272	62318632	chr3:62294272-62318632	0	-	62294272	62294272	8553170	4	506,87,96,36,	0,22833,23535,24324,
#Partially deleted in new
chr3	62318972	62333426	chr3:62318972-62333426	1	+	62320471	62333389	789624	6	83,112,65,124,75,172,	0,748,1487,2957,12352,14282,
#Deleted in new
chr3	62319014	62324133	chr3:62319014-62324133	0	+	62319014	62319014	8553170	5	41,112,65,124,240,	0,706,1445,2915,4879,
#Partially deleted in new
chr3	62319021	62333646	chr3:62319021-62333646	1	+	62320471	62333389	789624	5	34,65,124,75,392,	0,1438,2908,12303,14233,
#Partially deleted in new
chr3	62319031	62331335	chr3:62319031-62331335	0	+	62320471	62331335	789624	6	24,129,112,65,124,11,	0,251,689,1428,2898,12293,
#Partially deleted in new
chr3	62319042	62336213	chr3:62319042-62336213	3	+	62320471	62333389	789624	6	190,112,65,124,75,2959,	0,678,1417,2887,12282,14212,
#Deleted in new
chr3	62319071	62322519	chr3:62319071-62322519	0	+	62319071	62319071	8553170	4	161,112,65,590,	0,649,1388,2858,
#Partially deleted in new
chr3	62319720	62333646	chr3:62319720-62333646	1	+	62320471	62333389	789624	5	112,65,124,75,392,	0,739,2209,11604,13534,
#Partially deleted in new
chr3	62369680	62374324	chr3:62369680-62374324	3	-	62370082	62372868	789624	6	662,133,135,910,134,27,	0,1536,1852,2336,3598,4617,
#Partially deleted in new
chr3	62369683	62373515	chr3:62369683-62373515	1	-	62370082	62372868	789624	5	659,133,135,910,237,	0,1533,1849,2333,3595,
#Partially deleted in new
chr3	62369691	62373015	chr3:62369691-62373015	1	-	62370082	62372868	789624	4	651,133,135,999,	0,1525,1841,2325,
#Partially deleted in new
chr3	62398345	62875389	chr3:62398345-62875389	1	-	62399405	62875029	789624	28	1240,105,108,33,84,75,148,156,142,157,107,124,64,102,159,188,137,213,109,67,140,112,122,234,81,333,114,801,	0,4735,39758,47419,67021,67993,75827,79915,92993,93944,100816,117713,118234,119803,132308,134525,138099,151557,159059,172526,186839,194291,247376,252501,263968,355095,367525,476243,
#Partially deleted in new
chr3	62398346	62875379	chr3:62398346-62875379	1	-	62399405	62875029	0	30	1239,105,108,33,84,75,148,156,147,142,157,21,107,18,124,64,102,188,137,213,109,67,140,112,122,234,81,333,114,791,	0,4734,39757,47418,67020,67992,75826,79914,83376,92992,93943,95298,100815,114404,117712,118233,119802,134524,138098,151556,159058,172525,186838,194290,247375,252500,263967,355094,367524,476242,
#Partially deleted in new
chr3	62398347	62481855	chr3:62398347-62481855	0	-	62399405	62481855	789624	10	1238,105,108,33,84,75,15,148,156,133,	0,4733,39756,47417,67019,67991,68950,75825,79913,83375,
#Partially deleted in new
chr3	62398347	62404875	chr3:62398347-62404875	0	-	62398347	62398347	8553170	2	1238,1795,	0,4733,
#Partially deleted in new
chr3	62398349	62875338	chr3:62398349-62875338	1	-	62399405	62875029	0	27	1236,105,108,33,84,75,148,156,142,157,107,124,64,102,188,86,213,109,67,140,112,122,234,81,333,114,750,	0,4731,39754,47415,67017,67989,75823,79911,92989,93940,100812,117709,118230,119799,134521,138146,151553,159055,172522,186835,194287,247372,252497,263964,355091,367521,476239,
#Partially deleted in new
chr3	62398351	62441135	chr3:62398351-62441135	0	-	62398351	62398351	8553170	3	1234,105,3032,	0,4729,39752,
#Partially deleted in new
chr3	62398354	62474325	chr3:62398354-62474325	1	-	62399405	62474241	789624	8	1231,105,108,33,84,75,15,153,	0,4726,39749,47410,67012,67984,68943,75818,
#Partially deleted in new
chr3	62398971	62875241	chr3:62398971-62875241	3	-	62399405	62875029	0	28	614,105,108,33,84,75,148,156,142,157,107,69,124,64,102,188,137,213,109,67,140,112,122,234,81,333,114,653,	0,4109,39132,46793,66395,67367,75201,79289,92367,93318,100190,114666,117087,117608,119177,133899,137473,150931,158433,171900,186213,193665,246750,251875,263342,354469,366899,475617,
#Partially deleted in new
chr3	62403093	62478323	chr3:62403093-62478323	0	-	62403093	62478323	789624	6	92,108,84,75,148,63,	0,35010,62273,63245,71079,75167,
#Partially deleted in new
chr3	62465366	62470754	chr3:62465366-62470754	0	-	62465366	62465366	8553170	3	84,75,129,	0,972,5259,
#Deleted in new
chr3	62465366	62466681	chr3:62465366-62466681	0	-	62465366	62465366	8553170	2	84,343,	0,972,
#Deleted in new
chr3	62473707	62478316	chr3:62473707-62478316	0	-	62473707	62473707	8553170	2	613,56,	0,4553,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	62474172	62500606	chr3:62474172-62500606	0	-	62474172	62474172	8553170	5	148,156,142,157,1445,	0,4088,17166,18117,24989,
#Partially deleted in new
chr3	62478005	62492346	chr3:62478005-62492346	0	-	62478005	62478005	8553170	3	411,142,57,	0,13333,14284,
#Partially deleted in new
chr3	62491338	62536466	chr3:62491338-62536466	0	-	62491338	62536466	789624	10	142,157,9,107,18,124,64,102,188,22,	0,951,6807,7823,21412,24720,25241,26810,41532,45106,
#Partially deleted in new
chr3	62516113	62536581	chr3:62516113-62536581	0	-	62516113	62536581	789624	6	69,64,102,159,188,137,	0,466,2035,14540,16757,20331,
#Partially deleted in new
chr3	62532918	62550889	chr3:62532918-62550889	0	-	62532918	62532918	8553170	4	140,137,213,45,	0,3526,16984,17926,
#Partially deleted in new
chr3	62533021	62585246	chr3:62533021-62585246	0	-	62533021	62585246	789624	7	37,137,12,213,109,67,62,	0,3423,11826,16881,24383,37850,52163,
#Partially deleted in new
chr3	62536015	62550114	chr3:62536015-62550114	0	-	62536015	62536015	8553170	2	566,212,	0,13887,
#Partially deleted in new
chr3	62625229	62875029	chr3:62625229-62875029	1	-	62626524	62875029	0	7	1344,122,234,81,333,114,441,	0,20492,25617,37084,128211,140641,249359,
#Deleted in new
chr3	62779175	62779785	chr3:62779175-62779785	7	-	62779175	62779175	16724991	1	610,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	62796123	62796419	chr3:62796123-62796419	3	-	62796123	62796123	8553170	1	296,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	62814381	62814491	chr3:62814381-62814491	3	+	62814381	62814381	8553170	1	110,	0,
#Deleted in new
chr3	62926370	62926882	chr3:62926370-62926882	7	+	62926370	62926370	16724991	1	512,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	62950429	63124212	chr3:62950429-63124212	1	+	62950429	62950429	8553170	7	89,77,84,132,120,126,130,	0,1577,34606,38704,155873,172893,173653,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	62950457	63125062	chr3:62950457-63125062	0	+	62950457	62950457	8553170	6	61,77,120,64,126,980,	0,1549,155845,171798,172865,173625,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	62950470	63113711	chr3:62950470-63113711	0	+	62950470	62950470	8553170	6	48,77,74,84,132,135,	0,1536,3236,34565,38663,163106,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	62950470	63125062	chr3:62950470-63125062	3	+	62950470	62950470	5263520	9	48,77,108,120,190,244,64,126,980,	0,1536,152221,155832,163106,168228,171785,172852,173612,
#Deleted in new
chr3	63096373	63097711	chr3:63096373-63097711	7	-	63096373	63096373	16724991	1	1338,	0,
#Partially deleted in new
chr3	63105974	63113895	chr3:63105974-63113895	0	+	63105974	63105974	8553170	2	448,319,	0,7602,
#Deleted in new
chr3	63203217	63203448	chr3:63203217-63203448	7	-	63203217	63203217	16724991	1	231,	0,
#Partially deleted in new
chr3	63228314	63556696	chr3:63228314-63556696	0	+	63228314	63228314	8553170	5	66,88,133,125,154,	0,24184,39002,252517,328228,
#Partially deleted in new
chr3	63278122	63616921	chr3:63278122-63616921	3	+	63278533	63615481	789624	6	429,66,125,199,192,1698,	0,554,202709,278420,331002,337101,
#Partially deleted in new
chr3	63278317	63615536	chr3:63278317-63615536	1	+	63278533	63556563	789624	5	234,66,199,192,313,	0,359,278225,330807,336906,
#Partially deleted in new
chr3	63278327	63615920	chr3:63278327-63615920	0	+	63278533	63609143	789624	5	224,66,125,192,697,	0,349,202504,330797,336896,
#Partially deleted in new
chr3	63278650	63556649	chr3:63278650-63556649	0	+	63278650	63278650	8553170	4	92,229,125,107,	0,51419,202181,277892,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	63278665	63556741	chr3:63278665-63556741	0	+	63278665	63278665	8553170	4	77,125,125,199,	0,10709,202166,277877,
#Partially deleted in new
chr3	63351428	63609316	chr3:63351428-63609316	0	+	63351428	63351428	8553170	4	187,125,199,192,	0,129403,205114,257696,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	63423595	63550051	chr3:63423595-63550051	3	-	63423595	63423595	5263520	5	170,94,151,69,74,	0,3117,3837,20675,126382,
#Partially deleted in new
chr3	63443076	63616921	chr3:63443076-63616921	1	+	63443445	63615481	789624	5	393,125,199,192,1698,	0,37755,113466,166048,172147,
#Partially deleted in new
chr3	63443076	63556722	chr3:63443076-63556722	0	+	63443076	63443076	8553170	3	201,125,180,	0,37755,113466,
#Partially deleted in new
chr3	63443113	63615846	chr3:63443113-63615846	0	+	63443445	63609143	789624	4	356,125,192,623,	0,37718,166011,172110,
#Partially deleted in new
chr3	63443309	63556741	chr3:63443309-63556741	1	+	63443445	63480920	789624	4	160,43,125,199,	0,8763,37522,113233,
#Partially deleted in new
chr3	63443327	63616921	chr3:63443327-63616921	1	+	63443445	63610542	789624	6	142,125,199,192,80,1698,	0,37504,113215,165797,167146,171896,
#Partially deleted in new
chr3	63443332	63616920	chr3:63443332-63616920	1	+	63443445	63615481	789624	6	137,33,125,199,192,1697,	0,2211,37499,113210,165792,171891,
#Partially deleted in new
chr3	63443332	63610513	chr3:63443332-63610513	0	+	63443332	63443332	8553170	6	137,125,199,112,192,40,	0,37499,113210,118067,165792,167141,
#Partially deleted in new
chr3	63443336	63615595	chr3:63443336-63615595	1	+	63443445	63615481	789624	4	133,125,199,372,	0,37495,113206,171887,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	63545439	63545535	chr3:63545439-63545535	7	+	63545439	63545439	16724991	1	96,	0,
#Partially deleted in new
chr3	63652667	63664721	chr3:63652667-63664721	3	+	63652687	63664095	789624	4	130,35,140,785,	0,2094,7057,11269,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	63652678	63664060	chr3:63652678-63664060	0	+	63652687	63664060	789624	5	119,35,140,90,124,	0,2083,7046,11018,11258,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	63652697	63679020	chr3:63652697-63679020	1	+	63652699	63675624	789624	4	100,35,140,3471,	0,2064,7027,22852,
#Partially deleted in new
chr3	63741826	63805093	chr3:63741826-63805093	7	-	63741826	63741826	16724991	15	519,49,65,200,245,172,233,99,103,125,178,136,107,95,56,	0,6309,7959,9208,10789,12223,16419,24846,28491,33033,35543,38000,40605,44150,63211,
#Partially deleted in new
chr3	63767066	63783099	chr3:63767066-63783099	4	-	63767066	63767066	16724991	3	118,107,254,	0,15365,15779,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	63785985	63827445	chr3:63785985-63827445	5	-	63785985	63785985	16724991	2	86,622,	0,40838,
#Partially deleted in new
chr3	63819361	63848636	chr3:63819361-63848636	1	+	63819471	63845052	789624	7	235,320,125,114,165,60,273,	0,3888,8239,11748,12318,25661,29002,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	63819361	63832106	chr3:63819361-63832106	3	+	63819471	63831877	789624	5	235,320,125,114,427,	0,3888,8239,11748,12318,
#Partially deleted in new
chr3	63819471	63833637	chr3:63819471-63833637	1	+	63819471	63833637	789624	7	125,320,125,114,165,15,12,	0,3778,8129,11638,12208,13381,14154,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	63823499	63832106	chr3:63823499-63832106	0	+	63823499	63831877	789624	4	70,125,114,427,	0,4101,7610,8180,
#Partially deleted in new
chr3	63833869	63863903	chr3:63833869-63863903	3	-	63834131	63863790	789624	8	330,70,67,58,87,128,118,132,	0,1284,1454,2431,4106,4502,5786,29902,
#Partially deleted in new
chr3	63833870	63863868	chr3:63833870-63863868	1	-	63834131	63838480	789624	7	329,70,67,58,87,128,97,	0,1283,1453,2430,4105,4501,29901,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	63835153	63854742	chr3:63835153-63854742	0	-	63835153	63835153	8553170	7	70,67,58,87,128,118,135,	0,170,1147,2822,3218,4502,19454,
#Partially deleted in new
chr3	63835164	63839773	chr3:63835164-63839773	0	-	63838498	63839773	789624	6	59,67,58,87,128,91,	0,159,1136,2811,3207,4518,
#Partially deleted in new
chr3	63835326	63863786	chr3:63835326-63863786	0	-	63835326	63835326	8553170	6	64,58,87,128,118,283,	0,974,2649,3045,4329,28177,
#Partially deleted in new
chr3	63837991	63863799	chr3:63837991-63863799	0	-	63837991	63838480	789624	5	71,128,118,114,28,	0,380,1664,8112,25780,
#Partially deleted in new
chr3	63838100	63839779	chr3:63838100-63839779	0	-	63838100	63838100	8553170	2	399,124,	0,1555,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	63860644	63861819	chr3:63860644-63861819	3	+	63860644	63860644	789624	2	352,321,	0,854,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	63863154	63902202	chr3:63863154-63902202	0	+	63863154	63863154	8553170	5	41,102,73,99,1644,	0,1743,3686,35244,37404,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	63863158	63905838	chr3:63863158-63905838	1	+	63863158	63863158	8553170	5	37,190,102,99,2134,	0,1340,1739,35240,40546,
#Partially deleted in new
chr3	63864556	63996636	chr3:63864556-63996636	1	+	63912598	63996501	789624	12	443,99,336,69,105,253,260,83,266,199,122,1132,	0,33842,48031,48600,87822,115358,117629,118382,123502,125619,126181,130948,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	63864556	63912675	chr3:63864556-63912675	0	+	63912598	63912675	789624	4	443,98,99,88,	0,9192,33842,48031,
#Partially deleted in new
chr3	63864559	64003462	chr3:63864559-64003462	3	+	63912598	63999467	0	13	440,99,336,69,105,253,260,83,266,199,122,979,4013,	0,33839,48028,48597,87819,115355,117626,118379,123499,125616,126178,130945,134890,
#Partially deleted in new
chr3	63864639	63867057	chr3:63864639-63867057	0	+	63864639	63864639	8553170	4	49,102,97,217,	0,258,646,2201,
#Partially deleted in new
chr3	63864639	63898497	chr3:63864639-63898497	0	+	63864639	63864639	8553170	3	49,88,99,	0,13822,33759,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	63864639	63903410	chr3:63864639-63903410	2	+	63864639	63864639	8553170	3	1153,44,81,	0,15344,38690,
#Partially deleted in new
chr3	63898398	64003453	chr3:63898398-64003453	1	+	63912598	63999559	0	13	99,336,69,105,253,260,83,266,199,122,979,67,4004,	0,14189,14758,53980,81516,83787,84540,89660,91777,92339,97106,99222,101051,
#Deleted in new
chr3	63911517	63911772	chr3:63911517-63911772	3	-	63911517	63911517	789624	1	255,	0,
#Partially deleted in new
chr3	63911928	64000207	chr3:63911928-64000207	3	+	63912598	63999467	0	12	253,336,69,105,253,260,83,266,199,122,979,758,	0,659,1228,40450,67986,70257,71010,76130,78247,78809,83576,87521,
#Partially deleted in new
chr3	63912587	63999559	chr3:63912587-63999559	1	+	63912598	63999559	0	12	336,69,105,253,260,83,266,199,122,979,67,110,	0,569,39791,67327,69598,70351,75471,77588,78150,82917,85033,86862,
#Partially deleted in new
chr3	63967743	63999796	chr3:63967743-63999796	1	+	63967911	63999467	0	9	232,253,260,83,266,199,122,979,347,	0,12171,14442,15195,20315,22432,22994,27761,31706,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	63967806	63980663	chr3:63967806-63980663	0	+	63967806	63967806	8553170	2	169,749,	0,12108,
#Partially deleted in new
chr3	63968368	63982423	chr3:63968368-63982423	0	+	63968368	63968368	8553170	3	94,253,238,	0,11546,13817,
#Partially deleted in new
chr3	63982186	63988474	chr3:63982186-63988474	0	+	63982186	63982186	8553170	3	259,83,416,	0,752,5872,
#Partially deleted in new
chr3	63982890	63988463	chr3:63982890-63988463	0	+	63982890	63982890	8553170	2	131,405,	0,5168,
#Partially deleted in new
chr3	63988198	63990985	chr3:63988198-63990985	0	+	63988198	63988198	8553170	3	126,199,248,	0,1977,2539,
#Partially deleted in new
chr3	63990509	63995877	chr3:63990509-63995877	0	+	63990509	63990509	8553170	2	350,373,	0,4995,
#Deleted in new
chr3	63998735	64002003	chr3:63998735-64002003	0	+	63998735	63998735	8553170	1	3268,	0,
#Partially deleted in new
chr3	64004021	64012148	chr3:64004021-64012148	3	+	64004021	64004021	789624	3	2047,57,352,	0,5675,7775,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	64008081	64008692	chr3:64008081-64008692	3	-	64008081	64008081	8553170	1	611,	0,
#Partially deleted in new
chr3	64010548	64023560	chr3:64010548-64023560	3	-	64010667	64023419	0	8	216,78,169,109,220,146,206,286,	0,329,2890,8050,8269,8747,11769,12726,
#Partially deleted in new
chr3	64010549	64024010	chr3:64010549-64024010	1	-	64010667	64023835	0	8	215,78,169,109,220,146,206,206,	0,328,2889,8049,8268,8746,11768,13255,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	64010553	64017732	chr3:64010553-64017732	0	-	64010553	64010553	8553170	3	211,78,4294,	0,324,2885,
#Partially deleted in new
chr3	64010553	64019334	chr3:64010553-64019334	0	-	64010908	64019334	789624	5	211,78,109,220,39,	0,324,8045,8264,8742,
#Deleted in new
chr3	64010554	64013288	chr3:64010554-64013288	0	-	64010554	64010554	8553170	2	210,2411,	0,323,
#Partially deleted in new
chr3	64010554	64023437	chr3:64010554-64023437	0	-	64010554	64010554	8553170	7	210,78,169,109,220,146,1120,	0,323,2884,8044,8263,8741,11763,
#Partially deleted in new
chr3	64010554	64023472	chr3:64010554-64023472	1	-	64010667	64023419	0	9	210,78,169,109,220,146,206,159,198,	0,323,2884,8044,8263,8741,11763,12088,12720,
#Partially deleted in new
chr3	64010583	64023458	chr3:64010583-64023458	1	-	64010667	64023419	0	8	181,78,169,109,220,146,206,67,	0,294,2855,8015,8234,8712,11734,12808,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	64011963	64016246	chr3:64011963-64016246	3	+	64011963	64011963	8553170	2	79,362,	0,3921,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	64018320	64019389	chr3:64018320-64019389	0	-	64018320	64018320	8553170	3	387,220,94,	0,497,975,
#Partially deleted in new
chr3	64018662	64023478	chr3:64018662-64023478	0	-	64018662	64018662	8553170	5	45,220,146,206,428,	0,155,633,3655,4388,
#Partially deleted in new
chr3	64018898	64023458	chr3:64018898-64023458	0	-	64018898	64023419	789624	5	139,146,206,159,67,	0,397,3419,3744,4493,
#Partially deleted in new
chr3	64019423	64023456	chr3:64019423-64023456	0	-	64019423	64023419	789624	4	18,206,63,182,	0,2894,3315,3851,
#Deleted in new
chr3	64019507	64019925	chr3:64019507-64019925	3	+	64019507	64019507	8553170	1	418,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	64067963	64103131	chr3:64067963-64103131	3	+	64067963	64067963	789624	3	198,98,6209,	0,27130,28959,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	64071806	64072019	chr3:64071806-64072019	3	-	64071806	64071806	8553170	1	213,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	64078360	64087363	chr3:64078360-64087363	3	-	64078360	64078360	789624	4	875,173,594,487,	0,1474,4730,8516,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	64092241	64225481	chr3:64092241-64225481	1	-	64099050	64198927	789624	8	7684,873,187,204,138,114,184,572,	0,54588,60940,64920,67698,70774,106542,132668,
#Partially deleted in new
chr3	64093869	64268174	chr3:64093869-64268174	3	-	64099050	64198927	789624	8	6056,873,187,204,138,114,184,276,	0,52960,59312,63292,66070,69146,104914,174029,
#Partially deleted in new
chr3	64093870	64445407	chr3:64093870-64445407	1	-	64099050	64445372	789624	9	6055,873,187,204,138,114,184,86,77,	0,52959,59311,63291,66069,69145,104913,350612,351460,
#Deleted in new
chr3	64095740	64100186	chr3:64095740-64100186	0	-	64095740	64095740	8553170	1	4446,	0,
#Partially deleted in new
chr3	64098520	64163912	chr3:64098520-64163912	0	-	64098520	64098520	8553170	6	1405,873,187,204,138,897,	0,48309,54661,58641,61419,64495,
#Deleted in new
chr3	64099272	64101122	chr3:64099272-64101122	3	+	64099272	64099272	8553170	2	307,316,	0,1534,
#Deleted in new
chr3	64099777	64101114	chr3:64099777-64101114	0	+	64099777	64099777	8553170	2	86,308,	0,1029,
#Partially deleted in new
chr3	64103469	64106056	chr3:64103469-64106056	3	+	64103469	64103469	789624	4	35,241,177,43,	0,1023,2249,2544,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	64145406	64155036	chr3:64145406-64155036	0	-	64145406	64145406	8553170	2	2296,1855,	0,7775,
#Deleted in new
chr3	64159913	64163438	chr3:64159913-64163438	0	-	64159913	64159913	8553170	2	164,423,	0,3102,
#Partially deleted in new
chr3	64160056	64445245	chr3:64160056-64445245	0	-	64160056	64445245	789624	5	21,114,184,86,23,	0,2959,38727,284426,285166,
#Deleted in new
chr3	64174400	64175147	chr3:64174400-64175147	7	+	64174400	64174400	16724991	1	747,	0,
#Partially deleted in new
chr3	64182647	64445476	chr3:64182647-64445476	0	-	64182647	64182647	8553170	4	14,184,86,254,	0,16136,261835,262575,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	64187543	64200965	chr3:64187543-64200965	3	+	64187543	64187543	789624	4	62,54,123,2257,	0,2750,6646,11165,
#Partially deleted in new
chr3	64445230	64454832	chr3:64445230-64454832	3	+	64445230	64445230	8553170	4	177,174,118,96,	0,3292,5283,9506,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	64511754	64511857	chr3:64511754-64511857	3	+	64511754	64511754	8553170	1	103,	0,
#Partially deleted in new
chr3	64515653	64688000	chr3:64515653-64688000	3	-	64522170	64687657	789624	40	1468,95,105,92,134,95,95,133,195,171,174,168,177,162,270,168,105,120,165,165,211,127,130,167,96,118,137,182,146,105,142,147,106,41,116,84,290,163,401,458,	0,6512,17512,23549,25441,25666,25872,26184,31104,35238,45924,52714,78604,81176,86290,88268,88573,91306,97691,99667,100306,105460,106544,106766,115801,116154,117818,118044,126194,132286,133983,135363,138699,138918,139922,140138,142848,165547,170914,171889,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	64515656	64522511	chr3:64515656-64522511	0	-	64515656	64515656	8553170	2	1465,346,	0,6509,
#Partially deleted in new
chr3	64515812	64687679	chr3:64515812-64687679	1	-	64522170	64687657	789624	39	1309,95,105,92,134,95,95,133,195,171,174,168,177,162,270,168,105,120,165,165,211,127,130,167,96,118,137,182,146,105,142,147,106,41,116,290,163,401,137,	0,6353,17353,23390,25282,25507,25713,26025,30945,35079,45765,52555,78445,81017,86131,88109,88414,91147,97532,99508,100147,105301,106385,106607,115642,115995,117659,117885,126035,132127,133824,135204,138540,138759,139763,142689,165388,170755,171730,
#Partially deleted in new
chr3	64550148	64686610	chr3:64550148-64686610	0	-	64550148	64550148	8553170	30	914,174,168,177,162,270,168,105,120,165,165,211,127,130,167,96,118,137,182,146,105,142,147,106,41,116,84,290,163,43,	0,11429,18219,44109,46681,51795,53773,54078,56811,63196,65172,65811,70965,72049,72271,81306,81659,83323,83549,91699,97791,99488,100868,104204,104423,105427,105643,108353,131052,136419,
#Partially deleted in new
chr3	64561321	64586845	chr3:64561321-64586845	0	+	64561321	64561321	8553170	4	447,129,239,29,	0,21196,21951,25495,
#Deleted in new
chr3	64561337	64563325	chr3:64561337-64563325	0	+	64561337	64561337	8553170	2	431,366,	0,1622,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	64561345	64583740	chr3:64561345-64583740	0	+	64561345	64561345	8553170	2	423,468,	0,21927,
#Partially deleted in new
chr3	64561349	64587296	chr3:64561349-64587296	1	+	64561349	64561349	8553170	5	419,413,129,239,480,	0,7309,21168,21923,25467,
#Partially deleted in new
chr3	64561353	64587272	chr3:64561353-64587272	1	+	64561353	64561353	8553170	4	415,401,239,456,	0,7305,21919,25463,
#Partially deleted in new
chr3	64561454	64583424	chr3:64561454-64583424	1	+	64561454	64561454	8553170	4	314,157,259,152,	0,3950,7204,21818,
#Partially deleted in new
chr3	64561623	64582658	chr3:64561623-64582658	0	+	64561623	64561623	8553170	3	145,413,141,	0,7035,20894,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	64561666	64590084	chr3:64561666-64590084	3	+	64561666	64561666	789624	3	102,239,3268,	0,21606,25150,
#Partially deleted in new
chr3	64561710	64587319	chr3:64561710-64587319	0	+	64561710	64561710	8553170	2	58,503,	0,25106,
#Partially deleted in new
chr3	64561730	64565797	chr3:64561730-64565797	0	+	64561730	64561730	8553170	2	38,393,	0,3674,
#Partially deleted in new
chr3	64569021	64587306	chr3:64569021-64587306	0	+	64569021	64569021	8553170	2	38,490,	0,17795,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	64582542	64587453	chr3:64582542-64587453	1	+	64582542	64582542	8553170	2	969,637,	0,4274,
#Partially deleted in new
chr3	64583150	64587221	chr3:64583150-64587221	0	+	64583150	64583150	8553170	2	361,461,	0,3610,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	64583150	64583913	chr3:64583150-64583913	0	+	64583150	64583150	8553170	1	763,	0,
#Partially deleted in new
chr3	64583150	64592439	chr3:64583150-64592439	0	+	64583150	64583150	8553170	3	361,215,66,	0,3572,9223,
#Partially deleted in new
chr3	64583150	64587201	chr3:64583150-64587201	0	+	64583150	64583150	8553170	2	361,479,	0,3572,
#Partially deleted in new
chr3	64583150	64592404	chr3:64583150-64592404	0	+	64583150	64583150	8553170	3	361,435,31,	0,3666,9223,
#Partially deleted in new
chr3	64583168	64592431	chr3:64583168-64592431	0	+	64583168	64583168	8553170	4	343,136,121,58,	0,797,3648,9205,
#Partially deleted in new
chr3	64583175	64592757	chr3:64583175-64592757	0	+	64583175	64583175	8553170	3	336,121,384,	0,3641,9198,
#Deleted in new
chr3	64583783	64587284	chr3:64583783-64587284	0	+	64583783	64583783	8553170	2	318,468,	0,3033,
#Deleted in new
chr3	64583852	64587209	chr3:64583852-64587209	0	+	64583852	64583852	8553170	2	249,487,	0,2870,
#Partially deleted in new
chr3	64614857	64687667	chr3:64614857-64687667	0	-	64614857	64614857	8553170	21	628,211,127,130,167,96,118,137,182,146,105,142,147,106,41,116,84,290,163,401,125,	0,1102,6256,7340,7562,16597,16950,18614,18840,26990,33082,34779,36159,39495,39714,40718,40934,43644,66343,71710,72685,
#Partially deleted in new
chr3	64649941	64687990	chr3:64649941-64687990	1	-	64651012	64687657	789624	9	1222,106,41,116,84,290,163,401,448,	0,4411,4630,5634,5850,8560,31259,36626,37601,
#Partially deleted in new
chr3	64650901	64654679	chr3:64650901-64654679	0	-	64650901	64650901	8553170	3	262,106,108,	0,3451,3670,
#Partially deleted in new
chr3	64654389	64656044	chr3:64654389-64656044	0	-	64654389	64654389	8553170	3	69,41,469,	0,182,1186,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	64684908	64802725	chr3:64684908-64802725	1	+	64684908	64684908	8553170	2	430,3261,	0,114556,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	64685103	64975536	chr3:64685103-64975536	0	+	64685103	64685103	8553170	5	235,281,57,90,1725,	0,114361,124691,182064,288708,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	64685103	64743438	chr3:64685103-64743438	1	+	64685103	64685103	8553170	3	235,141,197,	0,56370,58138,
#Partially deleted in new
chr3	65174957	65193499	chr3:65174957-65193499	3	+	65174957	65174957	8553170	4	119,44,164,229,	0,14311,16446,18313,
#Partially deleted in new
chr3	65353524	66038308	chr3:65353524-66038308	1	-	65357075	66038308	789624	25	3608,89,139,144,61,94,201,294,193,92,84,217,32,621,183,93,134,58,36,83,202,207,120,117,313,	0,5539,7674,9940,11140,11328,22220,25736,28352,30007,33618,37617,47914,75995,77174,83630,86354,89267,94497,99733,116758,125067,139987,268447,684471,
#Partially deleted in new
chr3	65354230	65622090	chr3:65354230-65622090	1	-	65357075	65470320	789624	24	2902,89,139,144,61,94,201,294,193,92,84,217,32,621,183,93,134,58,36,83,202,207,120,119,	0,4833,6968,9234,10434,10622,21514,25030,27646,29301,32912,36911,47208,75289,76468,82924,85648,88561,93791,99027,116052,124361,139281,267741,
#Partially deleted in new
chr3	65354230	65622090	chr3:65354230-65622090	1	-	65356377	65470320	789624	22	2902,139,144,61,94,201,294,193,92,217,32,621,183,93,134,58,36,83,202,207,120,119,	0,6968,9234,10434,10622,21514,25030,27646,29301,36911,47208,75289,76468,82924,85648,88561,93791,99027,116052,124361,139281,267741,
#Partially deleted in new
chr3	65356377	66038308	chr3:65356377-66038308	1	-	65356377	66038308	789624	23	755,139,144,61,94,201,294,193,92,217,32,621,183,93,134,58,36,83,202,207,120,117,313,	0,4821,7087,8287,8475,19367,22883,25499,27154,34764,45061,73142,74321,80777,83501,86414,91644,96880,113905,122214,137134,265594,681618,
#Deleted in new
chr3	65359267	65359717	chr3:65359267-65359717	3	-	65359267	65359267	8553170	1	450,	0,
#Partially deleted in new
chr3	65360351	65597735	chr3:65360351-65597735	0	-	65361148	65597735	789624	22	986,144,61,94,204,294,193,92,84,217,32,621,183,93,134,58,36,83,202,207,120,55,	0,3113,4313,4501,15393,18909,21525,23180,26791,30790,41087,69168,70347,76803,79527,82440,87670,92906,109931,118240,133160,237329,
#Partially deleted in new
chr3	65360370	66038550	chr3:65360370-66038550	3	-	65361148	66038308	789624	23	967,144,61,94,204,294,193,92,84,217,32,621,183,93,134,58,36,83,202,207,120,117,555,	0,3094,4294,4482,15374,18890,21506,23161,26772,30771,41068,69149,70328,76784,79508,82421,87651,92887,109912,118221,133141,261601,677625,
#Partially deleted in new
chr3	65360864	65597886	chr3:65360864-65597886	0	-	65361148	65597886	789624	22	473,144,61,94,201,294,193,92,84,217,32,621,183,93,134,58,36,83,202,207,120,72,	0,2600,3800,3988,14880,18396,21012,22667,26278,30277,40574,68655,69834,76290,79014,81927,87157,92393,109418,117727,132647,236950,
#Partially deleted in new
chr3	65361076	66038308	chr3:65361076-66038308	1	-	65361148	66038308	789624	21	261,144,61,94,294,193,92,217,32,621,183,93,134,58,36,83,202,207,120,117,313,	0,2388,3588,3776,18184,20800,22455,30065,40362,68443,69622,76078,78802,81715,86945,92181,109206,117515,132435,260895,676919,
#Partially deleted in new
chr3	65361148	65478706	chr3:65361148-65478706	0	-	65361148	65478706	789624	19	189,144,61,94,204,294,193,92,217,32,621,183,93,134,58,36,83,202,115,	0,2316,3516,3704,14596,18112,20728,22383,29993,40290,68371,69550,76006,78730,81643,86873,92109,109134,117443,
#Partially deleted in new
chr3	65375764	65380831	chr3:65375764-65380831	0	-	65375764	65375764	8553170	3	184,294,90,	0,3496,4977,
#Partially deleted in new
chr3	65379343	65401704	chr3:65379343-65401704	0	-	65379343	65379343	8553170	6	211,193,92,84,217,175,	0,2533,4188,7799,11798,22186,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	65430075	65907675	chr3:65430075-65907675	0	-	65430075	65430075	8553170	17	65,183,93,134,58,36,83,205,207,120,223,117,51,147,151,212,53,	0,623,7079,9803,12716,17946,23182,40207,48516,63436,179668,191896,287399,288392,289905,472521,477547,
#Partially deleted in new
chr3	65430794	65448237	chr3:65430794-65448237	0	-	65430794	65430794	8553170	5	87,93,134,58,216,	0,6360,9084,11997,17227,
#Partially deleted in new
chr3	65437211	65478634	chr3:65437211-65478634	0	-	65437211	65478634	789624	6	36,134,58,83,202,43,	0,2667,5580,16046,33071,41380,
#Partially deleted in new
chr3	65452581	66038834	chr3:65452581-66038834	0	-	65452581	65452581	8553170	6	759,205,207,120,117,839,	0,17701,26010,40930,169390,585414,
#Partially deleted in new
chr3	65469751	65478692	chr3:65469751-65478692	0	-	65469751	65469751	8553170	2	733,101,	0,8840,
#Partially deleted in new
chr3	65470282	65549500	chr3:65470282-65549500	0	-	65470282	65470282	8553170	4	202,207,120,93,	0,8309,23229,79125,
#Partially deleted in new
chr3	65470366	65532895	chr3:65470366-65532895	0	-	65470366	65470366	8553170	4	118,207,120,144,	0,8225,23145,62385,
#Deleted in new
chr3	65687300	65688468	chr3:65687300-65688468	7	+	65687300	65687300	16724991	1	1168,	0,
#Deleted in new
chr3	65843889	65844446	chr3:65843889-65844446	7	+	65843889	65843889	16724991	1	557,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	65872814	65954558	chr3:65872814-65954558	3	-	65872814	65872814	789624	3	2236,212,119,	0,29782,81625,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	65893815	65925297	chr3:65893815-65925297	3	+	65893815	65893815	789624	3	102,91,398,	0,20275,31084,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	66003838	66003940	chr3:66003838-66003940	3	-	66003838	66003838	8553170	1	102,	0,
#Deleted in new
chr3	66008769	66009200	chr3:66008769-66009200	7	-	66008769	66008769	16724991	1	431,	0,
#Partially deleted in new
chr3	66133609	66378927	chr3:66133609-66378927	3	+	66221094	66377807	789624	11	375,386,157,110,105,48,45,70,65,74,1238,	0,87132,102934,109593,128441,129722,212754,229250,235868,236919,244080,
#Partially deleted in new
chr3	66221011	66378079	chr3:66221011-66378079	1	+	66243276	66377807	789624	9	116,110,105,48,45,70,65,74,390,	0,22191,41039,42320,125352,141848,148466,149517,156678,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr3	66221063	66388116	chr3:66221063-66388116	0	+	66243276	66356057	789624	13	64,110,105,48,45,54,70,65,74,381,93,837,1933,	0,22139,40987,42268,125300,134967,141796,148414,149465,156626,157346,159053,165120,
#Partially deleted in new
chr3	66243202	66378056	chr3:66243202-66378056	1	+	66243276	66371391	789624	9	110,105,48,45,70,65,74,212,367,	0,18848,20129,103161,119657,126275,127326,127999,134487,
#Partially deleted in new
chr3	66243202	66378927	chr3:66243202-66378927	0	+	66243202	66304464	789624	9	110,105,48,85,45,70,65,74,1238,	0,18848,20129,61250,103161,119657,126275,127326,134487,
#Partially deleted in new
chr3	66261594	66370584	chr3:66261594-66370584	0	+	66261594	66261594	8553170	6	56,105,48,45,65,56,	0,456,1737,84769,107883,108934,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	66293113	66293220	chr3:66293113-66293220	3	-	66293113	66293113	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	66323854	66324152	chr3:66323854-66324152	3	+	66323854	66323854	8553170	1	298,	0,
#Partially deleted in new
chr3	66378796	66500932	chr3:66378796-66500932	3	-	66380262	66500407	0	19	1693,285,153,126,420,282,321,164,72,72,81,144,144,144,144,138,75,72,743,	0,1780,2682,3476,4185,5194,7184,15243,19315,20173,26401,28551,31332,34074,36123,38332,72762,83641,121393,
#Partially deleted in new
chr3	66378796	66501011	chr3:66378796-66501011	1	-	66380262	66500407	0	20	1693,285,153,126,420,141,321,164,72,72,72,81,144,144,144,144,138,75,72,822,	0,1780,2682,3476,4185,5335,7184,15243,19315,20173,22812,26401,28551,31332,34074,36123,38332,72762,83641,121393,
#Partially deleted in new
chr3	66378797	66406213	chr3:66378797-66406213	0	-	66378797	66378797	8553170	12	1692,285,153,126,420,282,321,164,72,72,81,461,	0,1779,2681,3475,4184,5193,7183,15242,19314,20172,26400,26955,
#Partially deleted in new
chr3	66380224	66404410	chr3:66380224-66404410	0	-	66380224	66380224	8553170	11	265,285,153,126,420,282,321,164,72,72,176,	0,352,1254,2048,2757,3766,5756,13815,17887,18745,24010,
#Partially deleted in new
chr3	66409753	66412931	chr3:66409753-66412931	0	-	66409753	66409753	8553170	2	519,61,	0,3117,
#Partially deleted in new
chr3	66410150	66417632	chr3:66410150-66417632	0	-	66410150	66410150	8553170	5	122,144,144,138,50,	0,2720,4769,6978,7432,
#Partially deleted in new
chr3	66412925	66501263	chr3:66412925-66501263	0	-	66412925	66412925	8553170	6	89,144,138,75,72,171,	0,1994,4203,38633,49512,88167,
#Partially deleted in new
chr3	66414957	66498259	chr3:66414957-66498259	0	-	66414957	66414957	8553170	5	106,138,75,72,113,	0,2171,36601,47480,83189,
#Partially deleted in new
chr3	66451557	66469245	chr3:66451557-66469245	0	-	66451557	66451557	8553170	3	76,72,261,	0,10880,17427,
#Deleted in new
chr3	66622759	66623102	chr3:66622759-66623102	7	-	66622759	66622759	16724991	1	343,	0,
#Deleted in new
chr3	66637148	66637412	chr3:66637148-66637412	7	+	66637148	66637148	16724991	1	264,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	66794040	66796921	chr3:66794040-66796921	3	+	66794040	66794040	8553170	2	104,2512,	0,369,
#Partially deleted in new
chr3	66998306	67011210	chr3:66998306-67011210	3	+	66998355	67008385	789624	4	65,211,1115,3289,	0,674,4888,9615,
#Partially deleted in new
chr3	66998306	67008840	chr3:66998306-67008840	1	+	66998355	67008385	789624	2	65,919,	0,9615,
#Partially deleted in new
chr3	66998306	67003828	chr3:66998306-67003828	0	+	66998306	66998306	8553170	3	65,211,291,	0,674,5231,
#Partially deleted in new
chr3	66998306	67003697	chr3:66998306-67003697	0	+	67003198	67003697	789624	2	65,503,	0,4888,
#Partially deleted in new
chr3	66998924	67003484	chr3:66998924-67003484	0	+	66999042	67003484	789624	2	267,290,	0,4270,
#Partially deleted in new
chr3	67225463	67225527	chr3:67225463-67225527	3	+	67225463	67225463	5263520	1	64,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	67296299	67306359	chr3:67296299-67306359	3	+	67296299	67296299	8553170	2	104,1980,	0,8080,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	67302878	67304905	chr3:67302878-67304905	0	+	67302878	67302878	8553170	2	26,526,	0,1501,
#Partially deleted in new
chr3	67360459	67654610	chr3:67360459-67654610	1	-	67360628	67654586	789624	11	309,121,143,162,97,90,153,91,100,142,108,	0,40271,135338,137674,148347,157787,160022,167672,168627,248995,294043,
#Partially deleted in new
chr3	67374718	67654614	chr3:67374718-67654614	3	-	67375743	67654586	789624	11	1141,121,143,162,97,90,153,91,100,142,112,	0,26012,121079,123415,134088,143528,145763,153413,154368,234736,279784,
#Partially deleted in new
chr3	67374718	67528222	chr3:67374718-67528222	0	-	67375743	67528222	789624	5	1141,121,90,153,91,	0,26012,143528,145763,153413,
#Partially deleted in new
chr3	67408605	67654607	chr3:67408605-67654607	1	-	67408956	67654586	789624	10	429,143,162,97,90,153,91,100,142,105,	0,87192,89528,100201,109641,111876,119526,120481,200849,245897,
#Deleted in new
chr3	67513939	67514320	chr3:67513939-67514320	7	+	67513939	67513939	16724991	1	381,	0,
#Partially deleted in new
chr3	67654696	67747110	chr3:67654696-67747110	0	+	67654696	67654696	789624	4	406,94,123,340,	0,15119,16185,92074,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	67654757	67947713	chr3:67654757-67947713	3	+	67654757	67654757	789624	7	345,94,176,818,120,100,573,	0,15058,16071,185264,189475,234252,292383,
#Partially deleted in new
chr3	68004215	68545625	chr3:68004215-68545625	3	+	68006626	68544503	789624	5	487,121,141,125,1140,	0,2408,413064,534540,540270,
#Partially deleted in new
chr3	68006229	68545621	chr3:68006229-68545621	1	+	68006626	68544503	789624	4	515,141,125,1136,	0,411050,532526,538256,
#Deleted in new
chr3	68145003	68145630	chr3:68145003-68145630	7	+	68145003	68145003	16724991	1	627,	0,
#Deleted in new
chr3	68192397	68192580	chr3:68192397-68192580	7	+	68192397	68192397	16724991	1	183,	0,
#Partially deleted in new
chr3	68246810	68417421	chr3:68246810-68417421	0	+	68246810	68246810	8553170	5	100,138,148,120,142,	0,549,847,3981,170469,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	68417275	68417601	chr3:68417275-68417601	1	+	68417275	68417601	789624	2	145,14,	0,312,
#Deleted in new
chr3	68633705	68634356	chr3:68633705-68634356	7	-	68633705	68633705	16724991	1	651,	0,
#Deleted in new
chr3	68635704	68637024	chr3:68635704-68637024	7	+	68635704	68635704	16724991	1	1320,	0,
#Partially deleted in new
chr3	68731765	68932610	chr3:68731765-68932610	3	-	68733141	68885188	789624	6	1388,125,156,116,136,371,	0,7309,21097,148964,153409,200474,
#Partially deleted in new
chr3	68752915	68932568	chr3:68752915-68932568	0	-	68752915	68885188	789624	4	103,116,136,247,	0,127814,132259,179406,
#Partially deleted in new
chr3	68752975	68953297	chr3:68752975-68953297	0	-	68752975	68885188	789624	7	43,116,136,93,150,84,678,	0,127754,132199,160625,163089,198815,199644,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	68882966	68883091	chr3:68882966-68883091	7	+	68882966	68882966	16724991	1	125,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr3	68975213	69013961	chr3:68975213-69013961	1	-	68977617	69009846	789624	18	2551,103,120,62,69,87,72,93,104,107,105,95,109,101,224,56,285,388,	0,3119,4454,7597,12231,13081,13292,13711,22797,26394,29164,29926,32499,33214,34423,36722,37301,38360,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	68975216	69013623	chr3:68975216-69013623	3	-	68977617	69009846	789624	15	2548,103,120,62,69,104,107,105,95,109,101,224,56,285,50,	0,3116,4451,7594,12228,22794,26391,29161,29923,32496,33211,34420,36719,37298,38357,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	68975226	68977157	chr3:68975226-68977157	1	-	68976708	68977116	789624	1	1931,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	68975231	69001641	chr3:68975231-69001641	0	-	68975231	68975231	8553170	9	2533,103,120,62,69,87,512,104,34,	0,3101,4436,7579,12213,13063,13274,22779,26376,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	68977179	69013650	chr3:68977179-69013650	0	-	68989016	69009846	789624	16	585,103,120,62,69,87,72,93,105,95,109,101,224,56,285,77,	0,1153,2488,5631,10265,11115,11326,11745,27198,27960,30533,31248,32457,34756,35335,36394,
#Partially deleted in new
chr3	68977617	69009846	chr3:68977617-69009846	1	-	68977617	69009846	789624	15	147,103,120,62,69,87,72,93,104,107,105,95,109,101,210,	0,715,2050,5193,9827,10677,10888,11307,20393,23990,26760,27522,30095,30810,32019,
#Partially deleted in new
chr3	68977617	69009846	chr3:68977617-69009846	1	-	68977617	69009846	789624	12	147,103,120,62,69,104,107,105,95,109,101,210,	0,715,2050,5193,9827,20393,23990,26760,27522,30095,30810,32019,
#Partially deleted in new
chr3	68982736	68987859	chr3:68982736-68987859	0	-	68982736	68982736	8553170	2	136,415,	0,4708,
#Partially deleted in new
chr3	69007736	69013599	chr3:69007736-69013599	0	-	69007736	69009846	789624	6	85,101,224,56,432,26,	0,691,1900,4199,4631,5837,
#Partially deleted in new
chr3	69007761	69013671	chr3:69007761-69013671	0	-	69007761	69009846	789624	6	60,101,224,56,197,98,	0,666,1875,4174,4841,5812,
#Partially deleted in new
chr3	69013940	69048888	chr3:69013940-69048888	3	+	69013940	69013940	8553170	2	261,701,	0,34247,
#Partially deleted in new
chr3	69013983	69048564	chr3:69013983-69048564	0	+	69013983	69013983	8553170	3	218,130,377,	0,15881,34204,
#Partially deleted in new
chr3	69013983	69048564	chr3:69013983-69048564	0	+	69013983	69013983	8553170	4	77,64,176,377,	0,154,20991,34204,
#Partially deleted in new
chr3	69013989	69048564	chr3:69013989-69048564	0	+	69013989	69013989	8553170	2	71,377,	0,34198,
#Partially deleted in new
chr3	69014000	69048564	chr3:69014000-69048564	0	+	69014000	69014000	8553170	3	60,176,377,	0,20974,34187,
#Partially deleted in new
chr3	69014163	69056622	chr3:69014163-69056622	0	+	69014163	69014163	8553170	3	38,117,590,	0,34024,41869,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	69014163	69017507	chr3:69014163-69017507	0	+	69014163	69014163	8553170	2	38,704,	0,2640,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	69014163	69030679	chr3:69014163-69030679	0	+	69014163	69014163	8553170	2	38,815,	0,15701,
#Partially deleted in new
chr3	69014163	69035459	chr3:69014163-69035459	0	+	69014163	69014163	8553170	2	38,485,	0,20811,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	69014163	69035152	chr3:69014163-69035152	0	+	69014163	69014163	8553170	4	38,130,107,178,	0,15701,19686,20811,
#Partially deleted in new
chr3	69014164	69048441	chr3:69014164-69048441	0	+	69014164	69014164	8553170	4	37,130,176,254,	0,15700,20810,34023,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	69019826	69052303	chr3:69019826-69052303	3	-	69023176	69052086	789624	17	3494,126,153,102,93,70,193,157,93,157,167,143,106,127,104,1205,359,	0,4228,5733,6169,8073,8399,9988,13721,15196,18737,19016,19724,22980,23923,24665,27531,32118,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	69019841	69052339	chr3:69019841-69052339	1	-	69023176	69052086	789624	15	3479,126,153,102,93,70,193,157,93,143,106,127,104,1205,395,	0,4213,5718,6154,8058,8384,9973,13706,15181,19709,22965,23908,24650,27516,32103,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	69021847	69052333	chr3:69021847-69052333	1	-	69023176	69052086	789624	17	1473,126,153,102,93,70,193,157,93,157,167,143,106,127,104,1214,389,	0,2207,3712,4148,6052,6378,7967,11700,13175,16716,16995,17703,20959,21902,22644,25501,30097,
#Partially deleted in new
chr3	69023076	69052290	chr3:69023076-69052290	0	-	69029893	69052086	789624	16	244,126,153,102,93,70,163,93,157,167,143,106,127,104,1205,346,	0,978,2483,2919,4823,5149,6738,11946,15487,15766,16474,19730,20673,21415,24281,28868,
#Partially deleted in new
chr3	69024281	69026100	chr3:69024281-69026100	0	-	69024281	69024281	8553170	3	114,153,105,	0,1278,1714,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	69024798	69028098	chr3:69024798-69028098	0	-	69024798	69024798	8553170	3	914,102,199,	0,1197,3101,
#Partially deleted in new
chr3	69035095	69048564	chr3:69035095-69048564	0	+	69035095	69035095	8553170	3	55,83,377,	0,5279,13092,
#Deleted in new
chr3	69043791	69044628	chr3:69043791-69044628	0	-	69043791	69043791	8553170	2	85,137,	0,700,
#Partially deleted in new
chr3	69048388	69056241	chr3:69048388-69056241	1	+	69048388	69048388	8553170	2	443,209,	0,7644,
#Deleted in new
chr3	69048957	69049035	chr3:69048957-69049035	3	-	69048957	69048957	5263520	1	78,	0,
#Partially deleted in new
chr3	69054729	69080408	chr3:69054729-69080408	1	-	69055436	69080353	0	17	796,55,64,101,82,37,54,114,103,156,65,44,81,83,81,121,75,	0,1121,1270,1453,1882,2049,2526,7084,7347,8252,8709,9338,13198,16805,20700,23068,25604,
#Partially deleted in new
chr3	69054729	69080408	chr3:69054729-69080408	3	-	69055436	69080353	0	18	796,55,64,101,82,37,54,114,103,156,65,44,81,83,81,121,42,75,	0,1121,1270,1453,1882,2049,2526,7084,7347,8252,8709,9338,13198,16805,20700,23068,25382,25604,
#Partially deleted in new
chr3	69054729	69080381	chr3:69054729-69080381	1	-	69055436	69080353	789624	16	796,55,64,101,82,37,54,114,103,156,65,44,81,83,121,48,	0,1121,1270,1453,1882,2049,2526,7084,7347,8252,8709,9338,13198,16805,23068,25604,
#Partially deleted in new
chr3	69055297	69080377	chr3:69055297-69080377	0	-	69063449	69080353	789624	13	228,55,64,101,82,37,54,114,103,156,65,121,44,	0,553,702,885,1314,1481,1958,6516,6779,7684,8141,22500,25036,
#Partially deleted in new
chr3	69055297	69080377	chr3:69055297-69080377	0	-	69063117	69080353	789624	15	228,55,64,101,82,37,54,114,103,156,65,83,81,121,44,	0,553,702,885,1314,1481,1958,6516,6779,7684,8141,16237,20132,22500,25036,
#Partially deleted in new
chr3	69061582	69064091	chr3:69061582-69064091	0	-	69061582	69061582	8553170	5	345,103,156,65,24,	0,494,1399,1856,2485,
#Partially deleted in new
chr3	69063117	69080353	chr3:69063117-69080353	1	-	69063117	69080353	789624	6	20,65,83,81,121,20,	0,321,8417,12312,14680,17216,
#Partially deleted in new
chr3	69071092	69080368	chr3:69071092-69080368	0	-	69071092	69071092	8553170	5	525,81,121,42,35,	0,4337,6705,9019,9241,
#Partially deleted in new
chr3	69075082	69080365	chr3:69075082-69080365	0	-	69075082	69075082	8553170	3	428,121,32,	0,2715,5251,
#Partially deleted in new
chr3	69075083	69080365	chr3:69075083-69080365	0	-	69075083	69075083	8553170	4	427,121,42,32,	0,2714,5028,5250,
#Partially deleted in new
chr3	69077338	69080363	chr3:69077338-69080363	0	-	69077338	69077338	8553170	3	580,42,30,	0,2773,2995,
#Deleted in new
chr3	69079743	69080354	chr3:69079743-69080354	0	-	69079743	69079743	8553170	2	410,21,	0,590,
#Partially deleted in new
chr3	69084943	69106066	chr3:69084943-69106066	3	+	69085047	69104636	789624	3	280,218,1603,	0,16895,19520,
#Partially deleted in new
chr3	69085020	69106064	chr3:69085020-69106064	1	+	69085047	69104909	789624	3	203,19,1227,	0,16818,19817,
#Partially deleted in new
chr3	69085035	69102230	chr3:69085035-69102230	0	+	69085035	69085035	8553170	2	188,392,	0,16803,
#Partially deleted in new
chr3	69085041	69101894	chr3:69085041-69101894	0	+	69085047	69089815	789624	3	182,149,56,	0,4770,16797,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	69106871	69122566	chr3:69106871-69122566	3	-	69109094	69122386	789624	3	2250,1362,474,	0,11827,15221,
#Partially deleted in new
chr3	69108671	69122595	chr3:69108671-69122595	1	-	69109094	69122386	789624	4	450,1362,317,92,	0,10027,13421,13832,
#Partially deleted in new
chr3	69108723	69123032	chr3:69108723-69123032	1	-	69109094	69122386	789624	4	398,1362,317,161,	0,9975,13369,14148,
#Partially deleted in new
chr3	69169989	69386073	chr3:69169989-69386073	3	-	69171860	69385989	789624	23	1992,133,812,120,148,57,226,120,134,142,139,77,87,58,66,84,23,57,85,93,95,66,246,	0,6534,10909,12608,17780,19906,23658,25032,25241,26265,26910,28708,46273,48332,51868,54617,79236,80053,117762,132353,141273,143462,215838,
#Partially deleted in new
chr3	69170806	69200848	chr3:69170806-69200848	1	-	69171860	69196947	789624	13	1175,133,812,120,148,57,226,120,134,142,139,77,478,	0,5717,10092,11791,16963,19089,22841,24215,24424,25448,26093,27891,29564,
#Partially deleted in new
chr3	69195248	69200898	chr3:69195248-69200898	0	-	69195248	69200820	789624	5	116,142,139,77,87,	0,1006,1651,3449,5563,
#Partially deleted in new
chr3	69196718	69200521	chr3:69196718-69200521	0	-	69196718	69196718	8553170	3	320,77,151,	0,1979,3652,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	69196895	69199270	chr3:69196895-69199270	0	-	69196895	69196947	789624	3	143,77,285,	0,1802,2090,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	69197714	69320944	chr3:69197714-69320944	0	-	69197714	69197714	8553170	12	1060,87,58,66,84,23,57,85,93,95,66,56,	0,18548,20607,24143,26892,51511,52328,90037,104628,113548,115737,123174,
#Partially deleted in new
chr3	69198696	69250212	chr3:69198696-69250212	0	-	69198696	69198696	8553170	7	78,87,58,66,84,23,170,	0,17566,19625,23161,25910,50529,51346,
#Partially deleted in new
chr3	69198725	69250248	chr3:69198725-69250248	0	-	69198725	69198725	8553170	6	49,87,58,66,84,206,	0,17537,19596,23132,25881,51317,
#Partially deleted in new
chr3	69216262	69293061	chr3:69216262-69293061	0	-	69216262	69293061	789624	8	87,58,66,84,23,57,85,89,	0,2059,5595,8344,32963,33780,71489,76710,
#Partially deleted in new
chr3	69224606	69320954	chr3:69224606-69320954	0	-	69224606	69313517	789624	8	84,23,57,85,93,95,66,66,	0,24619,25436,63145,77736,86656,88845,96282,
#Partially deleted in new
chr3	69224682	69353697	chr3:69224682-69353697	0	-	69224682	69313517	789624	8	8,23,57,85,93,95,66,154,	0,24543,25360,63069,77660,86580,88769,128861,
#Partially deleted in new
chr3	69287644	69386304	chr3:69287644-69386304	0	-	69287644	69287644	8553170	5	192,93,95,66,477,	0,14698,23618,25807,98183,
#Partially deleted in new
chr3	69287750	69542583	chr3:69287750-69542583	0	-	69287750	69313517	789624	6	86,93,95,66,128,378,	0,14592,23512,25701,144883,254455,
#Partially deleted in new
chr3	69306406	69320982	chr3:69306406-69320982	0	-	69306406	69306406	8553170	4	316,95,66,94,	0,4856,7045,14482,
#Partially deleted in new
chr3	69310437	69541340	chr3:69310437-69541340	0	-	69310437	69313517	789624	5	80,95,66,128,186,	0,825,3014,122196,230717,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	69333960	69433129	chr3:69333960-69433129	0	-	69333960	69333960	8553170	3	506,128,143,	0,98673,99026,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	69334171	69385927	chr3:69334171-69385927	0	-	69334171	69334171	8553170	3	295,82,100,	0,2333,51656,
#Partially deleted in new
chr3	69376806	69386088	chr3:69376806-69386088	0	-	69376806	69376806	8553170	2	313,261,	0,9021,
#Deleted in new
chr3	69471451	69472532	chr3:69471451-69472532	7	-	69471451	69471451	16724991	1	1081,	0,
#Deleted in new
chr3	69535663	69536693	chr3:69535663-69536693	7	-	69535663	69535663	16724991	1	1030,	0,
#Partially deleted in new
chr3	69564105	69571122	chr3:69564105-69571122	3	-	69564105	69564105	8553170	3	156,178,121,	0,5343,6896,
#Deleted in new
chr3	69591340	69593121	chr3:69591340-69593121	3	+	69591340	69591340	8553170	2	72,677,	0,1104,
#Partially deleted in new
chr3	69739434	69968336	chr3:69739434-69968336	3	+	69739597	69965248	0	10	267,250,228,84,96,118,57,76,148,3490,	0,139699,198387,199663,201801,209616,212395,217020,219838,225412,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	69739473	69752385	chr3:69739473-69752385	0	+	69739473	69739473	8553170	2	228,346,	0,12566,
#Partially deleted in new
chr3	69739481	69965647	chr3:69739481-69965647	1	+	69739597	69965248	0	10	220,250,228,84,96,118,75,76,148,801,	0,139652,198340,199616,201754,209569,212330,216973,219791,225365,
#Partially deleted in new
chr3	69739481	69879347	chr3:69739481-69879347	0	+	69739481	69739481	8553170	3	220,39,214,	0,99112,139652,
#Partially deleted in new
chr3	69739481	69968336	chr3:69739481-69968336	1	+	69739597	69965248	0	10	220,250,228,84,96,118,57,76,148,3490,	0,139652,198340,199616,201754,209569,212348,216973,219791,225365,
#Partially deleted in new
chr3	69758703	69937835	chr3:69758703-69937835	0	+	69879185	69937835	789624	4	53,225,250,14,	0,20114,120430,179118,
#Partially deleted in new
chr3	69762723	69949083	chr3:69762723-69949083	0	+	69879185	69949083	789624	6	66,250,60,84,96,33,	0,116410,175098,176374,178512,186327,
#Partially deleted in new
chr3	69763555	69965647	chr3:69763555-69965647	1	+	69879185	69965248	0	10	137,250,228,84,96,118,57,76,148,801,	0,115578,174266,175542,177680,185495,188274,192899,195717,201291,
#Partially deleted in new
chr3	69763810	69968337	chr3:69763810-69968337	1	+	69763841	69965248	0	10	132,250,228,84,96,118,57,76,148,3491,	0,115323,174011,175287,177425,185240,188019,192644,195462,201036,
#Partially deleted in new
chr3	69763810	69879383	chr3:69763810-69879383	0	+	69763841	69879383	789624	2	132,250,	0,115323,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	69769486	69769773	chr3:69769486-69769773	3	-	69769486	69769486	8553170	1	287,	0,
#Partially deleted in new
chr3	69866223	69968336	chr3:69866223-69968336	1	+	69866290	69965248	0	10	123,250,228,84,96,118,57,76,148,3490,	0,12910,71598,72874,75012,82827,85606,90231,93049,98623,
#Partially deleted in new
chr3	69866258	69959373	chr3:69866258-69959373	0	+	69866290	69959373	789624	9	88,250,228,84,96,118,75,76,101,	0,12875,71563,72839,74977,82792,85553,90196,93014,
#Partially deleted in new
chr3	69936586	69965668	chr3:69936586-69965668	1	+	69936722	69965248	0	9	169,228,84,96,118,57,76,148,822,	0,1235,2511,4649,12464,15243,19868,22686,28260,
#Partially deleted in new
chr3	69936591	69968336	chr3:69936591-69968336	1	+	69936722	69965248	0	9	164,228,84,96,118,75,76,148,3490,	0,1230,2506,4644,12459,15220,19863,22681,28255,
#Partially deleted in new
chr3	69936627	69965570	chr3:69936627-69965570	0	+	69936722	69941243	789624	9	128,228,49,96,118,75,76,148,724,	0,1194,2470,4608,12423,15184,19827,22645,28219,
#Partially deleted in new
chr3	69936628	69939065	chr3:69936628-69939065	1	+	69936722	69938366	789624	3	127,228,714,	0,1193,1723,
#Partially deleted in new
chr3	69936722	69965248	chr3:69936722-69965248	1	+	69936722	69965248	0	9	33,60,84,96,118,57,76,148,402,	0,1099,2375,4513,12328,15107,19732,22550,28124,
#Partially deleted in new
chr3	69936828	69941331	chr3:69936828-69941331	0	+	69936828	69936828	8553170	4	344,228,84,96,	0,993,2269,4407,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	69999549	70072666	chr3:69999549-70072666	0	+	69999549	69999549	8553170	4	71,242,153,1191,	0,12807,13970,71926,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	69999555	70068710	chr3:69999555-70068710	0	+	69999555	69999555	8553170	5	65,242,153,73,513,	0,12801,13964,65690,68642,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	69999556	70030724	chr3:69999556-70030724	0	+	69999556	69999556	8553170	4	64,242,153,390,	0,12800,13963,30778,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	69999571	70014782	chr3:69999571-70014782	0	+	69999571	69999571	8553170	4	49,242,153,989,	0,12785,13948,14222,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	69999571	70184197	chr3:69999571-70184197	0	+	69999571	69999571	8553170	6	49,242,153,90,104,849,	0,12785,13948,71904,85154,183777,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	69999571	70172924	chr3:69999571-70172924	0	+	69999571	69999571	8553170	5	49,242,153,90,628,	0,12785,13948,71904,172725,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	69999575	70127252	chr3:69999575-70127252	1	+	69999575	69999575	8553170	6	45,242,153,73,90,979,	0,12781,13944,65670,71900,126698,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	69999576	70205153	chr3:69999576-70205153	2	+	69999576	69999576	8553170	5	44,242,153,90,670,	0,12780,13943,71899,204907,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	69999582	70184202	chr3:69999582-70184202	0	+	69999582	69999582	8553170	5	38,242,153,90,854,	0,12774,13937,71893,183766,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	69999582	70120708	chr3:69999582-70120708	1	+	69999582	69999582	8553170	9	38,242,153,90,104,192,74,70,301,	0,12774,13937,71893,85143,95083,96385,120532,120825,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	69999586	70014764	chr3:69999586-70014764	1	+	69999586	69999586	8553170	3	34,242,1245,	0,12770,13933,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	69999593	70172924	chr3:69999593-70172924	0	+	69999593	69999593	8553170	6	27,242,153,73,90,628,	0,12763,13926,65652,71882,172703,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	69999598	70205148	chr3:69999598-70205148	1	+	69999598	69999598	8553170	7	22,242,153,90,98,38,665,	0,12758,13921,71877,128088,159985,204885,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	69999598	70172924	chr3:69999598-70172924	0	+	69999598	69999598	8553170	6	22,242,153,90,72,628,	0,12758,13921,71877,137997,172698,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	69999732	70015318	chr3:69999732-70015318	0	+	69999732	69999732	789624	4	135,242,153,1525,	0,12624,13787,14061,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	69999732	70014787	chr3:69999732-70014787	0	+	69999732	69999732	8553170	3	135,242,1268,	0,12624,13787,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	69999732	70075385	chr3:69999732-70075385	0	+	69999732	69999732	8553170	5	135,242,153,90,490,	0,12624,13787,71743,75163,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	69999732	70184202	chr3:69999732-70184202	1	+	69999732	69999732	8553170	6	135,242,153,90,72,854,	0,12624,13787,71743,137863,183616,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	69999733	70272334	chr3:69999733-70272334	0	+	69999733	69999733	8553170	5	134,242,153,90,550,	0,12623,13786,71742,272051,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	69999747	70070336	chr3:69999747-70070336	1	+	69999747	69999747	8553170	5	120,242,153,73,2139,	0,12609,13772,65498,68450,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	69999774	70184125	chr3:69999774-70184125	0	+	69999774	69999774	8553170	5	93,242,153,90,777,	0,12582,13745,71701,183574,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	69999783	70025206	chr3:69999783-70025206	0	+	69999783	69999783	8553170	4	84,242,153,389,	0,12573,13736,25034,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	69999845	70389859	chr3:69999845-70389859	1	+	69999845	69999845	8553170	10	22,242,153,90,90,77,65,103,71,286,	0,12511,13674,71630,249261,249748,291333,354329,358408,389728,
#Deleted in new
chr3	70125069	70126609	chr3:70125069-70126609	7	-	70125069	70125069	16724991	1	1540,	0,
#Partially deleted in new
chr3	70140216	70140488	chr3:70140216-70140488	7	+	70140216	70140216	16724991	1	272,	0,
#Partially deleted in new
chr3	70196893	70312726	chr3:70196893-70312726	3	-	70196925	70311973	789624	4	292,222,88,176,	0,9675,114992,115657,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	70283610	70425190	chr3:70283610-70425190	1	+	70283610	70283610	8553170	6	237,65,215,98,71,414,	0,7568,8220,18979,74643,141166,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	70332739	70518064	chr3:70332739-70518064	1	+	70332739	70332739	8553170	4	162,71,103,1180,	0,25514,129820,184145,
#Deleted in new
chr3	70751122	70751350	chr3:70751122-70751350	7	+	70751122	70751122	16724991	1	228,	0,
#Deleted in new
chr3	70753853	70754573	chr3:70753853-70754573	7	+	70753853	70753853	16724991	2	439,137,	0,583,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	70808349	70808452	chr3:70808349-70808452	3	+	70808349	70808349	8553170	1	103,	0,
#Partially deleted in new
chr3	70952816	71583993	chr3:70952816-71583993	3	-	70959246	71198381	0	21	6575,167,70,122,102,80,202,84,88,105,205,154,90,138,102,191,61,95,130,149,84,	0,13073,17919,19738,24124,24826,25011,35177,48155,62732,88511,94125,99720,100819,159719,245385,347003,406333,540609,628732,631093,
#Partially deleted in new
chr3	70954714	71583989	chr3:70954714-71583989	1	-	70959246	71198381	0	21	4677,167,70,170,102,80,202,84,88,105,205,154,90,138,102,191,61,95,130,149,80,	0,11175,16021,17296,22226,22928,23113,33279,46257,60834,86613,92227,97822,98921,157821,243487,345105,404435,538711,626834,629195,
#Partially deleted in new
chr3	70956744	71543557	chr3:70956744-71543557	1	-	70959246	71198381	0	20	2647,167,70,122,102,80,202,84,88,105,205,154,90,138,102,191,61,95,130,134,	0,9145,13991,15810,20196,20898,21083,31249,44227,58804,84583,90197,95792,96891,155791,241457,343075,402405,536681,586679,
#Partially deleted in new
chr3	70958138	71583756	chr3:70958138-71583756	1	-	70959246	71198381	0	21	1253,167,70,122,102,77,202,84,88,105,205,154,90,138,102,191,61,95,130,149,186,	0,7751,12597,14416,18802,19504,19689,29855,42833,57410,83189,88803,94398,95497,154397,240063,341681,401011,535287,623410,625432,
#Partially deleted in new
chr3	70958772	71583719	chr3:70958772-71583719	1	-	70959246	71198381	789624	21	619,167,70,122,102,80,202,84,88,105,205,154,90,138,102,191,61,95,130,149,149,	0,7117,11963,13782,18168,18870,19055,29221,42199,56776,82555,88169,93764,94863,153763,239429,341047,400377,534653,622776,624798,
#Partially deleted in new
chr3	70958778	71583599	chr3:70958778-71583599	1	-	70959246	71198381	8553170	21	613,167,70,122,102,77,202,84,88,105,205,154,87,138,102,191,61,95,130,149,29,	0,7111,11957,13776,18162,18864,19049,29215,42193,56770,82549,88163,93758,94857,153757,239423,341041,400371,534647,622770,624792,
#Partially deleted in new
chr3	70959180	71306033	chr3:70959180-71306033	1	-	70959246	71198381	8553170	19	211,167,70,122,102,77,202,84,88,105,205,154,87,138,93,191,13,61,156,	0,6709,11555,13374,17760,18462,18647,28813,41791,56368,82147,87761,93356,94455,153355,239021,337252,340639,346697,
#Partially deleted in new
chr3	70959188	71064926	chr3:70959188-71064926	1	-	70959246	71053755	789624	15	203,167,70,122,102,80,202,84,88,105,205,154,87,138,103,	0,6701,11547,13366,17752,18454,18639,28805,41783,56360,82139,87753,93348,94447,105635,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr3	70959190	71583698	chr3:70959190-71583698	0	-	70972131	71198381	789624	23	201,167,70,170,122,102,80,202,84,88,105,205,154,90,138,102,191,61,40,3088,95,130,128,	0,6699,11545,12820,13364,17750,18452,18637,28803,41781,56358,82137,87751,93346,94445,153345,239011,340629,370590,373003,399959,534235,624380,
#Partially deleted in new
chr3	70959190	70966352	chr3:70959190-70966352	0	-	70959190	70959190	8553170	2	201,463,	0,6699,
#Partially deleted in new
chr3	70959190	71130592	chr3:70959190-71130592	0	-	70959246	71130592	789624	14	201,167,70,122,102,80,202,84,88,105,205,154,102,95,	0,6699,11545,13364,17750,18452,18637,28803,41781,56358,82137,87751,153345,171307,
#Partially deleted in new
chr3	70959190	71198392	chr3:70959190-71198392	1	-	70959246	71198381	8553170	16	201,167,70,170,102,80,202,84,88,105,205,154,90,138,102,191,	0,6699,11545,12820,17750,18452,18637,28803,41781,56358,82137,87751,93346,94445,153345,239011,
#Partially deleted in new
chr3	70959190	71581948	chr3:70959190-71581948	1	-	70959246	71198381	8553170	21	201,167,70,122,102,77,202,84,88,105,205,154,87,138,102,191,13,61,95,130,361,	0,6699,11545,13364,17750,18452,18637,28803,41781,56358,82137,87751,93346,94445,153345,239011,337242,340629,399959,534235,622397,
#Partially deleted in new
chr3	70959203	71131005	chr3:70959203-71131005	1	-	70959246	71130683	789624	16	188,167,70,122,102,80,202,84,88,105,205,154,90,138,102,508,	0,6686,11532,13351,17737,18439,18624,28790,41768,56345,82124,87738,93333,94432,153332,171294,
#Partially deleted in new
chr3	70959205	71005336	chr3:70959205-71005336	0	-	70959205	70959205	8553170	10	186,167,70,122,102,73,202,84,88,2484,	0,6684,11530,13349,17735,18441,18622,28788,41766,43647,
#Partially deleted in new
chr3	70959205	70971167	chr3:70959205-70971167	0	-	70959205	70959205	8553170	3	186,167,432,	0,6684,11530,
#Partially deleted in new
chr3	70959205	71131387	chr3:70959205-71131387	1	-	70959246	71130683	8553170	16	186,167,70,122,102,77,202,84,88,105,205,154,90,138,102,890,	0,6684,11530,13349,17735,18437,18622,28788,41766,56343,82122,87736,93331,94430,153330,171292,
#Partially deleted in new
chr3	70959207	71245364	chr3:70959207-71245364	1	-	70959246	71198381	0	17	184,167,70,122,102,80,202,84,88,105,205,154,90,138,102,191,511,	0,6682,11528,13347,17733,18435,18620,28786,41764,56341,82120,87734,93329,94428,153328,238994,285646,
#Partially deleted in new
chr3	70959210	71304760	chr3:70959210-71304760	1	-	70959246	71198381	0	16	181,167,70,122,102,80,202,84,88,105,205,154,102,191,61,82,	0,6679,11525,13344,17730,18432,18617,28783,41761,56338,82117,87731,153325,238991,340609,345468,
#Partially deleted in new
chr3	70959210	71064983	chr3:70959210-71064983	1	-	70959246	71053755	789624	15	181,167,70,122,102,80,202,84,88,105,205,154,90,138,160,	0,6679,11525,13344,17730,18432,18617,28783,41761,56338,82117,87731,93326,94425,105613,
#Partially deleted in new
chr3	70959210	71064095	chr3:70959210-71064095	0	-	70970802	71053755	8553170	14	181,167,70,102,80,202,84,88,105,205,154,90,138,123,	0,6679,11525,17730,18432,18617,28783,41761,56338,82117,87731,93326,94425,104762,
#Partially deleted in new
chr3	70959223	71583638	chr3:70959223-71583638	0	-	70988043	71198381	8553170	20	168,167,70,122,102,80,202,84,105,205,154,90,138,102,191,61,95,130,149,68,	0,6666,11512,13331,17717,18419,18604,28770,56325,82104,87718,93313,94412,153312,238978,340596,399926,534202,622325,624347,
#Partially deleted in new
chr3	70959224	71359202	chr3:70959224-71359202	1	-	70959246	71198381	8553170	18	167,167,70,122,102,80,202,84,88,105,205,154,87,138,102,191,61,53,	0,6665,11511,13330,17716,18418,18603,28769,41747,56324,82103,87717,93312,94411,153311,238977,340595,399925,
#Partially deleted in new
chr3	70959230	71130892	chr3:70959230-71130892	1	-	70959246	71130683	0	16	161,167,70,122,102,80,202,84,88,105,205,154,87,138,102,395,	0,6659,11505,13324,17710,18412,18597,28763,41741,56318,82097,87711,93306,94405,153305,171267,
#Partially deleted in new
chr3	70959230	71583683	chr3:70959230-71583683	1	-	70959246	71198381	789624	20	161,167,70,122,102,80,202,84,88,105,205,154,90,138,102,191,61,130,149,113,	0,6659,11505,13324,17710,18412,18597,28763,41741,56318,82097,87711,93306,94405,153305,238971,340589,534195,622318,624340,
#Partially deleted in new
chr3	70959231	71583599	chr3:70959231-71583599	0	-	70988043	71198381	8553170	20	160,167,70,122,102,80,202,84,105,205,154,87,138,102,191,61,95,130,149,29,	0,6658,11504,13323,17709,18411,18596,28762,56317,82096,87710,93305,94404,153304,238970,340588,399918,534194,622317,624339,
#Partially deleted in new
chr3	70959236	71690165	chr3:70959236-71690165	0	-	71493457	71690165	8553170	21	155,167,70,122,102,77,202,84,88,105,205,154,90,138,102,191,61,95,65,130,156,	0,6653,11499,13318,17704,18406,18591,28757,41735,56312,82091,87705,93300,94399,153299,238965,340583,399913,508014,534189,730773,
#Partially deleted in new
chr3	70959236	71132099	chr3:70959236-71132099	1	-	70959246	71053755	8553170	17	155,167,70,122,102,77,202,84,88,105,205,154,90,138,102,87,9,	0,6653,11499,13318,17704,18406,18591,28757,41735,56312,82091,87705,93300,94399,153299,171261,172854,
#Partially deleted in new
chr3	70959241	71064928	chr3:70959241-71064928	0	-	70959241	70959241	8553170	15	150,167,70,666,102,80,202,84,88,105,205,154,90,138,105,	0,6648,11494,12769,17699,18401,18586,28752,41730,56307,82086,87700,93295,94394,105582,
#Partially deleted in new
chr3	70959246	71198381	chr3:70959246-71198381	1	-	70959246	71198381	789624	14	145,167,102,80,202,84,88,105,205,154,87,138,102,180,	0,6643,17694,18396,18581,28747,41725,56302,82081,87695,93290,94389,153289,238955,
#Partially deleted in new
chr3	70959246	71132211	chr3:70959246-71132211	1	-	70959246	71053755	8553170	16	145,167,70,122,102,80,202,84,88,105,205,154,90,138,102,121,	0,6643,11489,13308,17694,18396,18581,28747,41725,56302,82081,87695,93290,94389,153289,172844,
#Partially deleted in new
chr3	70959247	71132205	chr3:70959247-71132205	0	-	70959247	71053755	8553170	16	144,167,70,122,102,80,202,84,88,105,205,154,87,138,102,115,	0,6642,11488,13307,17693,18395,18580,28746,41724,56301,82080,87694,93289,94388,153288,172843,
#Partially deleted in new
chr3	70959315	71299840	chr3:70959315-71299840	0	-	70959315	71047044	8553170	14	76,167,70,122,102,80,202,84,88,105,205,154,102,21,	0,6574,11420,13239,17625,18327,18512,28678,41656,56233,82012,87626,153220,340504,
#Partially deleted in new
chr3	70965893	71581573	chr3:70965893-71581573	0	-	70965893	71198381	8553170	19	163,70,122,102,80,202,84,88,105,205,154,90,138,102,191,61,95,130,175,	0,4842,6661,11047,11749,11934,22100,35078,49655,75434,81048,86643,87742,146642,232308,333926,393256,527532,615505,
#Partially deleted in new
chr3	70968367	71041518	chr3:70968367-71041518	0	-	70968367	70968367	8553170	8	4309,102,77,202,84,88,105,191,	0,8573,9275,9460,19626,32604,47181,72960,
#Partially deleted in new
chr3	70968443	71003407	chr3:70968443-71003407	0	-	70968443	70968443	8553170	7	2362,122,102,80,202,84,2436,	0,4111,8497,9199,9384,19550,32528,
#Partially deleted in new
chr3	70968847	70978029	chr3:70968847-70978029	0	-	70968847	70968847	8553170	6	204,70,122,102,77,202,	0,1888,3707,8093,8795,8980,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	70976085	70979115	chr3:70976085-70979115	0	-	70976085	70976085	8553170	3	957,80,1288,	0,1557,1742,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	70977642	70979307	chr3:70977642-70979307	0	-	70977642	70977642	8553170	2	77,1480,	0,185,
#Partially deleted in new
chr3	70977984	71132127	chr3:70977984-71132127	0	-	70977984	71047044	8553170	8	45,84,88,105,205,154,102,37,	0,10009,22987,37564,63343,68957,134551,154106,
#Partially deleted in new
chr3	70977984	71064963	chr3:70977984-71064963	0	-	71015641	71053755	8553170	7	45,84,88,105,90,138,140,	0,10009,22987,37564,74552,75651,86839,
#Partially deleted in new
chr3	70986910	71047077	chr3:70986910-71047077	0	-	70986910	70986910	8553170	4	1167,105,205,136,	0,28638,54417,60031,
#Partially deleted in new
chr3	71001033	71064940	chr3:71001033-71064940	0	-	71001033	71053755	789624	7	26,105,205,148,90,138,117,	0,14515,40294,45908,51503,52602,63790,
#Partially deleted in new
chr3	71015589	71305986	chr3:71015589-71305986	0	-	71015589	71053755	8553170	8	64,205,154,87,138,13,61,109,	0,25738,31352,36947,38046,280843,284230,290288,
#Partially deleted in new
chr3	71040277	71112545	chr3:71040277-71112545	0	-	71040378	71112545	789624	6	126,205,154,90,138,10,	0,1050,6664,12259,13358,72258,
#Deleted in new
chr3	71041527	71065767	chr3:71041527-71065767	0	-	71041527	71053755	789624	5	5,154,90,138,143,	0,5414,11009,12108,24097,
#Deleted in new
chr3	71044694	71064930	chr3:71044694-71064930	0	-	71044694	71044694	8553170	5	688,154,90,138,107,	0,2247,7842,8941,20129,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	71047057	71186546	chr3:71047057-71186546	0	-	71047057	71047057	8553170	5	38,87,138,102,120,	0,5479,6578,65478,139369,
#Partially deleted in new
chr3	71052602	71306053	chr3:71052602-71306053	0	-	71052602	71198381	789624	6	24,138,102,191,61,176,	0,1033,59933,145599,247217,253275,
#Partially deleted in new
chr3	71053717	71095387	chr3:71053717-71095387	0	-	71053717	71053717	8553170	3	56,321,71,	0,1395,41599,
#Partially deleted in new
chr3	71112549	71493570	chr3:71112549-71493570	0	-	71112549	71198381	8553170	5	88,191,61,95,145,	0,85652,187270,246600,380876,
#Partially deleted in new
chr3	71112590	71582112	chr3:71112590-71582112	0	-	71112590	71198381	8553170	6	47,191,61,95,130,564,	0,85611,187229,246559,380835,468958,
#Deleted in new
chr3	71129976	71130759	chr3:71129976-71130759	0	-	71129976	71129976	8553170	2	350,262,	0,521,
#Partially deleted in new
chr3	71187649	71306033	chr3:71187649-71306033	0	-	71187649	71187649	8553170	5	354,191,13,61,156,	0,10552,108783,112170,118228,
#Partially deleted in new
chr3	71197881	71583939	chr3:71197881-71583939	1	-	71197903	71198381	0	7	187,191,61,95,130,149,30,	0,320,101938,161268,295544,383667,386028,
#Partially deleted in new
chr3	71197881	71210869	chr3:71197881-71210869	1	-	71197903	71198381	0	3	187,191,51,	0,320,12937,
#Partially deleted in new
chr3	71197885	71289713	chr3:71197885-71289713	1	-	71197903	71198381	8553170	3	183,191,171,	0,316,91657,
#Partially deleted in new
chr3	71197885	71288369	chr3:71197885-71288369	1	-	71197903	71198381	8553170	3	183,191,55,	0,316,90429,
#Partially deleted in new
chr3	71198209	71391564	chr3:71198209-71391564	0	-	71198209	71198381	8553170	5	183,13,61,95,79,	0,98223,101610,160940,193276,
#Partially deleted in new
chr3	71198274	71583739	chr3:71198274-71583739	0	-	71198274	71198381	8553170	5	118,61,95,130,169,	0,101545,160875,295151,385296,
#Partially deleted in new
chr3	71198274	71360769	chr3:71198274-71360769	0	-	71198274	71198381	8553170	4	118,61,95,290,	0,101545,160875,162205,
#Partially deleted in new
chr3	71198330	71583592	chr3:71198330-71583592	0	-	71198330	71198381	8553170	7	62,61,95,65,130,149,22,	0,101489,160819,268920,295095,383218,385240,
#Partially deleted in new
chr3	71276086	71289616	chr3:71276086-71289616	0	-	71276086	71276086	8553170	3	267,108,74,	0,12228,13456,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	71289768	71305853	chr3:71289768-71305853	3	+	71289768	71289768	789624	5	203,124,58,133,182,	0,2748,6681,12959,15903,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	71291872	71306022	chr3:71291872-71306022	0	-	71291872	71291872	8553170	3	348,61,145,	0,7947,14005,
#Partially deleted in new
chr3	71296084	71306015	chr3:71296084-71306015	0	-	71296084	71296084	8553170	3	361,61,138,	0,3735,9793,
#Partially deleted in new
chr3	71299694	71583586	chr3:71299694-71583586	0	-	71299694	71299694	8553170	4	186,95,149,16,	0,59455,281854,283876,
#Partially deleted in new
chr3	71299819	71725418	chr3:71299819-71725418	0	-	71690153	71725367	8553170	6	61,95,130,156,73,227,	0,59330,193606,390190,410592,425372,
#Partially deleted in new
chr3	71318201	71469567	chr3:71318201-71469567	0	-	71318201	71318201	8553170	3	517,95,122,	0,40948,151244,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	71356488	71581516	chr3:71356488-71581516	0	-	71356488	71356488	8553170	3	2756,130,118,	0,136937,224910,
#Partially deleted in new
chr3	71359227	71578266	chr3:71359227-71578266	0	-	71359227	71359227	8553170	3	17,130,162,	0,134198,218877,
#Partially deleted in new
chr3	71493149	71581556	chr3:71493149-71581556	0	-	71493149	71493149	8553170	2	406,158,	0,88249,
#Deleted in new
chr3	71541969	71542089	chr3:71541969-71542089	3	-	71541969	71541969	5263520	1	120,	0,
#Partially deleted in new
chr3	71567862	71571112	chr3:71567862-71571112	3	+	71567862	71567862	8553170	2	69,535,	0,2715,
#Deleted in new
chr3	71570254	71574457	chr3:71570254-71574457	3	-	71570254	71570254	8553170	2	2576,963,	0,3240,
#Deleted in new
chr3	71579644	71583712	chr3:71579644-71583712	0	-	71579644	71579644	8553170	3	521,149,142,	0,1904,3926,
#Deleted in new
chr3	71579662	71583762	chr3:71579662-71583762	0	-	71579662	71579662	8553170	2	2035,192,	0,3908,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	71581720	71628558	chr3:71581720-71628558	3	+	71581720	71581720	8553170	3	57,144,619,	0,45920,46219,
#Deleted in new
chr3	71584942	71587409	chr3:71584942-71587409	3	+	71584942	71584942	8553170	1	2467,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	71675415	71725375	chr3:71675415-71725375	3	-	71684681	71725367	789624	7	9313,156,67,61,95,73,184,	0,14594,18459,21044,24198,34996,49776,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	71679288	71754383	chr3:71679288-71754383	1	-	71684681	71699639	789624	8	5440,156,67,61,95,73,148,169,	0,10721,14586,17171,20325,31123,49187,74926,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	71679290	71729118	chr3:71679290-71729118	1	-	71684681	71699639	789624	8	5438,156,67,61,95,73,148,45,	0,10719,14584,17169,20323,31121,49185,49783,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	71682726	71753624	chr3:71682726-71753624	1	-	71684681	71699639	789624	8	2002,156,67,61,95,73,148,162,	0,7283,11148,13733,16887,27685,45749,70736,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	71684540	71728650	chr3:71684540-71728650	0	-	71684540	71684540	8553170	4	188,95,73,175,	0,15073,25871,43935,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	71684619	71728637	chr3:71684619-71728637	0	-	71684619	71684619	8553170	5	109,156,67,73,162,	0,5390,9255,25792,43856,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	71684681	71754773	chr3:71684681-71754773	1	-	71684681	71699639	789624	8	47,156,67,61,95,73,148,130,	0,5328,9193,11778,14932,25730,43794,69962,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	71690040	71729197	chr3:71690040-71729197	0	-	71690040	71699639	789624	7	125,67,61,95,73,148,124,	0,3834,6419,9573,20371,38435,39033,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	71693874	71754383	chr3:71693874-71754383	0	-	71693874	71699639	789624	6	67,61,95,73,148,169,	0,2585,5739,16537,34601,60340,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	71693896	71728720	chr3:71693896-71728720	0	-	71693896	71699639	789624	5	45,61,95,73,245,	0,2563,5717,16515,34579,
#Deleted in new
chr3	71754049	71756496	chr3:71754049-71756496	3	+	71754049	71755177	789624	1	2447,	0,
#Partially deleted in new
chr3	71771655	71785206	chr3:71771655-71785206	3	-	71772723	71785052	789624	3	1173,126,250,	0,9811,13301,
#Partially deleted in new
chr3	71772100	71785061	chr3:71772100-71785061	1	-	71772723	71785052	789624	4	728,63,126,105,	0,2344,9366,12856,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	71827176	71827471	chr3:71827176-71827471	3	+	71827176	71827176	8553170	1	295,	0,
#Deleted in new
chr3	72006773	72006975	chr3:72006773-72006975	7	+	72006773	72006773	16724991	1	202,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	72035299	72100427	chr3:72035299-72100427	1	-	72035299	72035299	789624	7	1221,102,423,102,292,107,259,	0,20561,24387,25210,25503,64604,64869,
#Partially deleted in new
chr3	72059821	72100112	chr3:72059821-72100112	0	-	72059821	72059821	8553170	3	288,292,209,	0,981,40082,
#Partially deleted in new
chr3	72060763	72100303	chr3:72060763-72100303	0	-	72060763	72060763	8553170	3	331,107,135,	0,39140,39405,
#Partially deleted in new
chr3	72060796	72234244	chr3:72060796-72234244	2	-	72060796	72060796	8553170	3	298,107,97,	0,39107,173351,
#Partially deleted in new
chr3	72060840	72242565	chr3:72060840-72242565	0	-	72060840	72060840	8553170	3	254,107,131,	0,39063,181594,
#Partially deleted in new
chr3	72060932	72100455	chr3:72060932-72100455	1	-	72060932	72060932	8553170	3	162,103,287,	0,38971,39236,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	72061060	72068020	chr3:72061060-72068020	0	+	72061060	72061060	8553170	3	113,79,109,	0,6063,6851,
#Partially deleted in new
chr3	72061060	72101074	chr3:72061060-72101074	0	-	72061060	72061060	8553170	3	34,107,287,	0,38843,39727,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	72061060	72069933	chr3:72061060-72069933	3	+	72061060	72061060	8553170	5	113,70,79,72,125,	0,835,6063,6851,8748,
#Partially deleted in new
chr3	72061060	72279503	chr3:72061060-72279503	0	-	72061060	72061060	8553170	5	34,107,97,245,113,	0,38843,173087,214047,218330,
#Partially deleted in new
chr3	72080563	72084641	chr3:72080563-72084641	3	-	72080563	72080563	8553170	2	85,221,	0,3857,
#Deleted in new
chr3	72085108	72085287	chr3:72085108-72085287	7	+	72085108	72085108	16724991	1	179,	0,
#Deleted in new
chr3	72086887	72087725	chr3:72086887-72087725	7	+	72086887	72086887	16724991	1	838,	0,
#Partially deleted in new
chr3	72092428	72100869	chr3:72092428-72100869	0	-	72092428	72092428	8553170	3	46,107,82,	0,7475,8359,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	72097727	72100957	chr3:72097727-72100957	1	-	72097727	72097727	8553170	3	1284,107,170,	0,2176,3060,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	72151256	72174332	chr3:72151256-72174332	1	+	72151256	72151256	789624	3	162,107,2424,	0,8104,20652,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	72151266	72207770	chr3:72151266-72207770	3	+	72151266	72151266	8553170	3	152,173,633,	0,54870,55871,
#Partially deleted in new
chr3	72152758	72172099	chr3:72152758-72172099	0	+	72152758	72152758	8553170	3	160,107,191,	0,6602,19150,
#Partially deleted in new
chr3	72152892	72172250	chr3:72152892-72172250	0	+	72152892	72152892	8553170	3	106,107,342,	0,6468,19016,
#Deleted in new
chr3	72178278	72178810	chr3:72178278-72178810	3	+	72178278	72178278	8553170	1	532,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	72202943	72209892	chr3:72202943-72209892	3	-	72202943	72202943	8553170	3	495,374,78,	0,967,6871,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	72321050	72324027	chr3:72321050-72324027	3	-	72321050	72321050	8553170	1	2977,	0,
#Partially deleted in new
chr3	72371824	72446621	chr3:72371824-72446621	3	-	72378384	72446621	0	4	6813,99,177,126,	0,7215,7426,74671,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	72504805	72550552	chr3:72504805-72550552	3	-	72504805	72504805	8553170	3	284,120,462,	0,44579,45285,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	72576690	72576854	chr3:72576690-72576854	3	+	72576690	72576690	8553170	1	164,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	72583369	72583535	chr3:72583369-72583535	7	+	72583369	72583369	16724991	1	166,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	72691704	72691811	chr3:72691704-72691811	7	-	72691704	72691704	16724991	1	107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	72749276	72795590	chr3:72749276-72795590	0	-	72749276	72749276	8553170	3	1560,121,2343,	0,43639,43971,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	72749278	72848480	chr3:72749278-72848480	3	-	72750283	72848340	0	11	1558,121,124,54,155,128,113,155,123,65,283,	0,43637,63392,66071,67951,75145,83090,91766,93001,95080,98919,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	72749278	72848415	chr3:72749278-72848415	0	-	72844443	72848340	789624	11	1558,121,124,54,155,128,113,155,123,95,218,	0,43637,63392,66071,67951,75145,83090,91766,93001,95080,98919,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	72749958	72846363	chr3:72749958-72846363	1	-	72750283	72846273	0	11	878,121,124,54,155,128,113,155,123,65,149,	0,42957,62712,65391,67271,74465,82410,91086,92321,94400,96256,
#Deleted in new
chr3	72772538	72773471	chr3:72772538-72773471	7	+	72772538	72772538	16724991	1	933,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	72809619	72817384	chr3:72809619-72817384	0	-	72809619	72809619	8553170	4	333,124,54,155,	0,3051,5730,7610,
#Deleted in new
chr3	72814496	72817250	chr3:72814496-72817250	0	-	72814496	72814496	8553170	3	59,54,21,	0,853,2733,
#Partially deleted in new
chr3	72832368	72861914	chr3:72832368-72861914	0	-	72832368	72842343	789624	5	113,155,123,65,46,	0,8676,9911,11990,29500,
#Partially deleted in new
chr3	72841044	72848472	chr3:72841044-72848472	0	-	72842353	72848340	789624	3	155,123,275,	0,1235,7153,
#Deleted in new
chr3	72876736	72878102	chr3:72876736-72878102	7	-	72876736	72876736	16724991	1	1366,	0,
#Deleted in new
chr3	72884233	72884679	chr3:72884233-72884679	7	+	72884233	72884233	16724991	1	446,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	72888072	72976926	chr3:72888072-72976926	3	+	72888233	72975159	789624	7	436,193,132,252,124,173,1950,	0,20294,34131,67025,69156,79474,86904,
#Partially deleted in new
chr3	72908021	72955181	chr3:72908021-72955181	0	+	72908469	72955181	789624	3	538,132,84,	0,14182,47076,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	72926954	72927237	chr3:72926954-72927237	3	-	72926954	72926954	8553170	1	283,	0,
#Deleted in new
chr3	72929043	72929593	chr3:72929043-72929593	7	+	72929043	72929043	16724991	1	550,	0,
#Partially deleted in new
chr3	72955214	72998138	chr3:72955214-72998138	0	+	72955214	72998138	789624	4	135,124,173,62,	0,2014,12332,42862,
#Partially deleted in new
chr3	72996784	73069199	chr3:72996784-73069199	3	+	72997037	73065722	789624	9	287,82,171,94,38,75,144,290,3803,	0,1292,50401,62252,64238,66888,67218,68067,68612,
#Partially deleted in new
chr3	72996802	73064982	chr3:72996802-73064982	0	+	72997037	73064092	789624	7	269,82,94,38,75,82,131,	0,1274,62234,64220,66870,67262,68049,
#Partially deleted in new
chr3	72996817	73061454	chr3:72996817-73061454	0	+	72996817	72996817	8553170	5	254,82,171,94,432,	0,1259,50368,62219,64205,
#Partially deleted in new
chr3	72996838	73064966	chr3:72996838-73064966	0	+	72997037	73064966	789624	7	233,82,171,94,38,144,115,	0,1238,50347,62198,64184,67164,68013,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	72996976	73016134	chr3:72996976-73016134	1	+	72997037	73015846	789624	4	95,82,69,313,	0,1100,17938,18845,
#Partially deleted in new
chr3	72997357	73059051	chr3:72997357-73059051	0	+	72998156	73059051	789624	4	55,82,171,15,	0,719,49828,61679,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	73027807	73027873	chr3:73027807-73027873	3	+	73027807	73027807	8553170	1	66,	0,
#Deleted in new
chr3	73061658	73063337	chr3:73061658-73063337	3	+	73062081	73062900	789624	1	1679,	0,
#Deleted in new
chr3	73064013	73065290	chr3:73064013-73065290	0	+	73064013	73065149	789624	2	133,439,	0,838,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	73092147	73092257	chr3:73092147-73092257	3	-	73092147	73092147	8553170	1	110,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	73110991	73111182	chr3:73110991-73111182	3	+	73110991	73110991	8553170	1	191,	0,
#Deleted in new
chr3	73182500	73183291	chr3:73182500-73183291	7	-	73182500	73182500	16724991	1	791,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	73241788	73241896	chr3:73241788-73241896	3	-	73241788	73241788	8553170	1	108,	0,
#Partially deleted in new
chr3	73382432	73624940	chr3:73382432-73624940	3	-	73383364	73624825	0	10	2498,117,102,63,99,88,248,108,87,838,	0,3236,5535,7383,8585,18489,21715,219921,226165,241670,
#Partially deleted in new
chr3	73382432	73400965	chr3:73382432-73400965	0	-	73383364	73400965	789624	7	1373,282,117,102,63,99,44,	0,2216,3236,5535,7383,8585,18489,
#Partially deleted in new
chr3	73382898	73474632	chr3:73382898-73474632	1	-	73383364	73404284	789624	8	2032,117,102,63,99,88,248,178,	0,2770,5069,6917,8119,18023,21249,91556,
#Partially deleted in new
chr3	73383078	73561618	chr3:73383078-73561618	1	-	73383364	73404284	789624	8	1852,117,102,63,99,88,248,168,	0,2590,4889,6737,7939,17843,21069,178372,
#Partially deleted in new
chr3	73383135	73433904	chr3:73383135-73433904	1	-	73383364	73433707	789624	8	1795,117,102,63,99,88,248,266,	0,2533,4832,6680,7882,17786,21012,50503,
#Partially deleted in new
chr3	73384182	73569461	chr3:73384182-73569461	0	-	73384182	73569162	789624	8	748,117,102,63,99,88,248,311,	0,1486,3785,5633,6835,16739,19965,184968,
#Partially deleted in new
chr3	73384469	73388146	chr3:73384469-73388146	0	-	73384469	73384469	8553170	3	461,117,179,	0,1199,3498,
#Partially deleted in new
chr3	73385697	73402503	chr3:73385697-73402503	0	-	73385697	73385697	8553170	7	88,102,63,99,88,145,60,	0,2270,4118,5320,15224,16071,16746,
#Partially deleted in new
chr3	73387986	73401082	chr3:73387986-73401082	0	-	73387986	73387986	8553170	4	83,63,99,161,	0,1829,3031,12935,
#Partially deleted in new
chr3	73391083	73404563	chr3:73391083-73404563	0	-	73391083	73391083	8553170	3	33,88,416,	0,9838,13064,
#Partially deleted in new
chr3	73391101	73556938	chr3:73391101-73556938	0	-	73391101	73391101	8553170	4	15,88,248,239,	0,9820,13046,165598,
#Partially deleted in new
chr3	73408057	73624840	chr3:73408057-73624840	1	-	73408095	73624825	0	4	203,108,87,738,	0,194296,200540,216045,
#Deleted in new
chr3	73593939	73594002	chr3:73593939-73594002	3	-	73593939	73593939	8553170	1	63,	0,
#Partially deleted in new
chr3	73621712	73625998	chr3:73621712-73625998	3	+	73621712	73621712	8553170	3	79,108,587,	0,2145,3699,
#Deleted in new
chr3	73623567	73625921	chr3:73623567-73625921	1	+	73623567	73623567	8553170	3	162,108,510,	0,290,1844,
#Deleted in new
chr3	73623627	73626570	chr3:73623627-73626570	0	+	73623627	73623627	8553170	4	102,108,95,308,	0,230,1784,2635,
#Deleted in new
chr3	73623633	73626796	chr3:73623633-73626796	0	+	73623633	73623633	8553170	3	332,95,534,	0,1778,2629,
#Deleted in new
chr3	73624409	73627626	chr3:73624409-73627626	3	+	73624409	73624409	8553170	1	3217,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	73648398	73648807	chr3:73648398-73648807	7	-	73648398	73648398	16724991	1	409,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	73959641	73959927	chr3:73959641-73959927	3	-	73959641	73959641	8553170	1	286,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	73999804	74005609	chr3:73999804-74005609	3	+	73999804	73999804	8553170	2	89,1282,	0,4523,
#Deleted in new
chr3	74101348	74103553	chr3:74101348-74103553	7	+	74101348	74101348	16724991	1	2205,	0,
#Deleted in new
chr3	74135958	74136892	chr3:74135958-74136892	7	+	74135958	74135958	16724991	1	934,	0,
#Partially deleted in new
chr3	74262567	74521140	chr3:74262567-74521140	3	-	74264400	74521112	0	22	1934,169,113,187,116,235,71,150,159,118,176,128,151,130,137,185,103,204,96,176,127,83,	0,3913,4698,22737,32553,35389,37300,38830,39079,40122,72167,73963,99322,101899,102998,106621,107321,108628,162277,223888,237091,258490,
#Partially deleted in new
chr3	74264384	74267539	chr3:74264384-74267539	0	-	74264384	74264384	8553170	3	117,169,274,	0,2096,2881,
#Deleted in new
chr3	75084154	75085237	chr3:75084154-75085237	7	+	75084154	75084154	16724991	1	1083,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	75182753	75183048	chr3:75182753-75183048	3	-	75182753	75182753	8553170	1	295,	0,
#Deleted in new
chr3	75214475	75214549	chr3:75214475-75214549	3	+	75214475	75214475	5263520	1	74,	0,
#Deleted in new
chr3	75214630	75215636	chr3:75214630-75215636	7	+	75214630	75214630	16724991	1	1006,	0,
#Partially deleted in new
chr3	75328548	75339071	chr3:75328548-75339071	7	-	75328548	75328548	16724991	5	918,76,250,198,138,	0,1342,7550,8494,10385,
#Deleted in new
chr3	75347832	75348787	chr3:75347832-75348787	7	-	75347832	75347832	16724991	1	955,	0,
#Deleted in new
chr3	75356466	75357501	chr3:75356466-75357501	5	-	75356466	75356466	16724991	1	1035,	0,
#Deleted in new
chr3	75370447	75371342	chr3:75370447-75371342	7	-	75370447	75370447	16724991	1	895,	0,
#Partially deleted in new
chr3	75384058	75391810	chr3:75384058-75391810	7	-	75384058	75384058	16724991	3	94,78,197,	0,2748,7555,
#Partially deleted in new
chr3	75395187	75395320	chr3:75395187-75395320	7	+	75395187	75395187	16724991	1	133,	0,
#Partially deleted in new
chr3	75395403	75395536	chr3:75395403-75395536	7	-	75395403	75395403	16724991	1	133,	0,
#Partially deleted in new
chr3	75415069	75422143	chr3:75415069-75422143	7	+	75415069	75415069	16724991	8	111,117,39,60,111,112,76,132,	0,856,1158,1842,3101,4755,5874,6942,
#Partially deleted in new
chr3	75421551	75435048	chr3:75421551-75435048	7	-	75421551	75421551	16724991	5	1510,172,83,63,324,	0,4898,9280,11256,13173,
#Partially deleted in new
chr3	75421559	75434957	chr3:75421559-75434957	4	-	75421559	75421559	16724991	7	1502,150,266,134,83,63,40,	0,4890,5867,6215,9272,11248,13358,
#Partially deleted in new
chr3	75421565	75435048	chr3:75421565-75435048	4	-	75421565	75421565	16724991	8	1496,150,266,134,102,83,63,131,	0,4884,5861,6209,7570,9266,11242,13352,
#Partially deleted in new
chr3	75422418	75435046	chr3:75422418-75435046	4	-	75422418	75422418	16724991	5	643,150,83,63,129,	0,4031,8413,10389,12499,
#Partially deleted in new
chr3	75422717	75435035	chr3:75422717-75435035	4	-	75422717	75422717	16724991	5	425,150,83,63,118,	0,3732,8114,10090,12200,
#Partially deleted in new
chr3	75422960	75435110	chr3:75422960-75435110	5	-	75422960	75422960	16724991	8	101,150,266,134,102,83,63,96,	0,3489,4466,4814,6175,7871,9847,12054,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	75425275	75434969	chr3:75425275-75434969	4	-	75425275	75425275	16724991	5	829,172,83,63,245,	0,1174,5556,7532,9449,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	75435347	75457486	chr3:75435347-75457486	3	+	75435347	75435347	789624	4	66,139,193,870,	0,8160,15862,21269,
#Partially deleted in new
chr3	75446768	75491202	chr3:75446768-75491202	7	-	75446768	75446768	16724991	3	625,153,165,	0,9892,44269,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	75447164	75452651	chr3:75447164-75452651	1	+	75447164	75447164	8553170	3	132,193,120,	0,4045,5367,
#Deleted in new
chr3	75452196	75452658	chr3:75452196-75452658	0	+	75452196	75452196	8553170	1	462,	0,
#Deleted in new
chr3	75521802	75522012	chr3:75521802-75522012	7	+	75521802	75521802	16724991	1	210,	0,
#Partially deleted in new
chr3	75540048	75579999	chr3:75540048-75579999	7	-	75540048	75540048	16724991	2	179,22,	0,39929,
#Deleted in new
chr3	75542148	75542929	chr3:75542148-75542929	7	-	75542148	75542148	16724991	1	781,	0,
#Partially deleted in new
chr3	75579977	75580199	chr3:75579977-75580199	5	-	75579977	75579977	16724991	1	222,	0,
#Deleted in new
chr3	75590297	75590649	chr3:75590297-75590649	7	-	75590297	75590297	16724991	1	352,	0,
#Deleted in new
chr3	75598651	75599673	chr3:75598651-75599673	7	-	75598651	75598651	16724991	1	1022,	0,
#Partially deleted in new
chr3	75619505	75623849	chr3:75619505-75623849	7	-	75619505	75619505	16724991	3	294,119,274,	0,2121,4070,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	75624274	75670156	chr3:75624274-75670156	7	-	75624274	75624274	16724991	3	879,122,137,	0,5805,45745,
#Partially deleted in new
chr3	75624685	75625153	chr3:75624685-75625153	5	-	75624685	75624685	16724991	1	468,	0,
#Partially deleted in new
chr3	75624898	75625188	chr3:75624898-75625188	7	+	75624898	75624898	16724991	1	290,	0,
#Deleted in new
chr3	75629992	75634057	chr3:75629992-75634057	7	+	75629992	75629992	16724991	9	157,44,139,104,95,140,96,123,82,	0,267,640,977,1723,1944,2965,3121,3983,
#Deleted in new
chr3	75630762	75630858	chr3:75630762-75630858	3	+	75630762	75630762	5263520	1	96,	0,
#Deleted in new
chr3	75653560	75654773	chr3:75653560-75654773	7	-	75653560	75653560	16724991	1	1213,	0,
#Deleted in new
chr3	75658533	75659014	chr3:75658533-75659014	7	+	75658533	75658533	16724991	1	481,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	75664329	75667220	chr3:75664329-75667220	3	+	75664379	75666041	789624	4	228,78,78,1694,	0,489,796,1197,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	75664329	75667220	chr3:75664329-75667220	1	+	75664379	75666041	789624	4	228,75,78,1694,	0,492,796,1197,
#Deleted in new
chr3	75668930	75670185	chr3:75668930-75670185	7	+	75668930	75668930	16724991	1	1255,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	75672390	75679303	chr3:75672390-75679303	3	+	75672390	75672390	789624	6	379,45,160,117,161,471,	0,803,1456,3373,3577,6442,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	75674412	75676625	chr3:75674412-75676625	1	+	75674412	75674412	8553170	2	1468,658,	0,1555,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	75678659	75785336	chr3:75678659-75785336	0	-	75678659	75678659	8553170	7	492,130,123,93,127,59,553,	0,32527,37759,62616,62950,104646,106124,
#Partially deleted in new
chr3	75729960	75785553	chr3:75729960-75785553	1	-	75730612	75783362	789624	6	658,62,93,127,59,170,	0,2099,11315,11649,53345,55423,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	75735874	75785567	chr3:75735874-75785567	3	-	75736877	75741643	789624	4	3471,93,127,184,	0,5401,5735,49509,
#Deleted in new
chr3	75738279	75738363	chr3:75738279-75738363	3	+	75738279	75738279	5263520	1	84,	0,
#Partially deleted in new
chr3	75739291	75785058	chr3:75739291-75785058	0	-	75739291	75783362	789624	5	54,93,127,59,275,	0,1984,2318,44014,45492,
#Partially deleted in new
chr3	75739291	75785583	chr3:75739291-75785583	0	-	75739291	75741643	789624	5	54,93,127,88,200,	0,1984,2318,45623,46092,
#Partially deleted in new
chr3	75906694	77647510	chr3:75906694-77647510	1	+	75937493	77646055	0	27	266,122,327,158,121,139,128,125,172,206,82,163,167,122,232,125,172,183,43,128,282,157,261,206,174,201,1457,	0,30786,1191319,1570719,1574404,1586549,1616080,1639643,1644123,1651249,1655956,1656472,1658259,1661618,1667804,1670795,1673252,1682056,1688447,1689928,1695515,1701103,1710818,1715532,1728175,1738009,1739359,
#Partially deleted in new
chr3	75906801	77607811	chr3:75906801-77607811	0	+	75937493	77607811	789624	23	159,122,327,158,121,139,128,12,125,172,206,82,163,167,122,232,125,172,183,43,128,282,14,	0,30679,1191212,1570612,1574297,1586442,1615973,1620601,1639536,1644016,1651142,1655849,1656365,1658152,1661511,1667697,1670688,1673145,1681949,1688340,1689821,1695408,1700996,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	75964979	75965069	chr3:75964979-75965069	3	-	75964979	75964979	8553170	1	90,	0,
#Partially deleted in new
chr3	76311095	77098213	chr3:76311095-77098213	0	+	76311095	76311095	8553170	2	322,200,	0,786918,
#Deleted in new
chr3	76434017	76435428	chr3:76434017-76435428	7	+	76434017	76434017	16724991	1	1411,	0,
#Partially deleted in new
chr3	77039885	77649964	chr3:77039885-77649964	3	+	77040785	77646055	0	26	961,327,158,121,139,128,125,172,206,82,163,167,122,232,125,172,183,43,128,282,157,261,206,174,201,3911,	0,58128,437528,441213,453358,482889,506452,510932,518058,522765,523281,525068,528427,534613,537604,540061,548865,555256,556737,562324,567912,577627,582341,594984,604818,606168,
#Partially deleted in new
chr3	77040729	77647116	chr3:77040729-77647116	1	+	77040785	77646055	789624	27	117,327,158,121,139,128,125,172,206,82,163,167,122,232,125,172,183,43,128,282,157,261,206,183,174,201,1063,	0,57284,436684,440369,452514,482045,505608,510088,517214,521921,522437,524224,527583,533769,536760,539217,548021,554412,555893,561480,567068,576783,581497,591744,594140,603974,605324,
#Partially deleted in new
chr3	77040729	77647116	chr3:77040729-77647116	0	+	77040785	77564462	789624	27	117,327,158,121,139,128,125,172,206,82,163,139,167,122,232,125,172,183,43,128,282,157,261,206,174,201,1063,	0,57284,436684,440369,452514,482045,505608,510088,517214,521921,522437,523720,524224,527583,533769,536760,539217,548021,554412,555893,561480,567068,576783,581497,594140,603974,605324,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	77092056	77092163	chr3:77092056-77092163	3	+	77092056	77092056	8553170	1	107,	0,
#Deleted in new
chr3	77316751	77317598	chr3:77316751-77317598	7	-	77316751	77316751	16724991	1	847,	0,
#Partially deleted in new
chr3	77477409	77649964	chr3:77477409-77649964	1	+	77477409	77646055	789624	24	162,121,139,128,125,172,206,82,163,167,122,232,125,172,183,43,128,282,157,261,206,174,201,3911,	0,3689,15834,45365,68928,73408,80534,85241,85757,87544,90903,97089,100080,102537,111341,117732,119213,124800,130388,140103,144817,157460,167294,168644,
#Partially deleted in new
chr3	77588780	77618180	chr3:77588780-77618180	0	+	77588780	77617777	789624	6	153,43,128,282,157,668,	0,6361,7842,13429,19017,28732,
#Partially deleted in new
chr3	77596673	77607954	chr3:77596673-77607954	0	+	77596673	77607954	789624	4	77,282,126,157,	0,5536,6261,11124,
#Partially deleted in new
chr3	77603743	77617837	chr3:77603743-77617837	0	+	77603743	77603743	8553170	3	298,157,325,	0,4054,13769,
#Partially deleted in new
chr3	77617725	77646119	chr3:77617725-77646119	0	+	77617725	77646058	789624	5	48,206,174,192,66,	0,4501,17144,26978,28328,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	77629121	77649500	chr3:77629121-77649500	0	+	77629121	77629121	8553170	3	5922,201,3447,	0,15582,16932,
#Partially deleted in new
chr3	77634924	77646265	chr3:77634924-77646265	0	+	77634924	77646055	789624	4	119,273,201,212,	0,7746,9779,11129,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	77811740	77811844	chr3:77811740-77811844	3	-	77811740	77811740	8553170	1	104,	0,
#Partially deleted in new
chr3	78038704	78046794	chr3:78038704-78046794	3	-	78038704	78038704	8553170	3	206,101,102,	0,3437,7988,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	78087403	78092270	chr3:78087403-78092270	3	+	78087403	78087403	8553170	3	235,171,148,	0,4126,4719,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	78115157	78115457	chr3:78115157-78115457	3	+	78115157	78115157	8553170	1	300,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	78161697	78161992	chr3:78161697-78161992	3	+	78161697	78161697	8553170	1	295,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	78266939	78291191	chr3:78266939-78291191	1	+	78266939	78266939	8553170	3	128,54,394,	0,13554,23858,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	78266942	78294056	chr3:78266942-78294056	0	+	78266942	78266942	8553170	3	125,54,363,	0,13551,26751,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	78267005	78294731	chr3:78267005-78294731	3	+	78267005	78267005	8553170	4	62,54,115,108,	0,13488,26688,27618,
#Partially deleted in new
chr3	78525100	78525485	chr3:78525100-78525485	7	+	78525100	78525100	16724991	1	385,	0,
#Partially deleted in new
chr3	78597239	79019459	chr3:78597239-79019459	1	-	78598912	79018461	789624	28	1688,197,309,153,407,249,145,108,336,155,43,198,172,122,232,122,167,169,82,206,172,134,128,139,121,158,327,1053,	0,2873,9493,17408,20395,30081,33921,36695,38533,42504,48908,54492,59858,62446,63790,64753,70643,70894,71244,72856,88506,91408,117157,120035,120523,149503,341361,421167,
#Partially deleted in new
chr3	78597240	79767815	chr3:78597240-79767815	1	-	78598912	79589911	0	31	1687,197,309,153,407,249,145,108,336,155,43,27,198,172,122,232,122,167,169,82,206,172,125,128,139,121,158,327,84,138,64,	0,2872,9492,17407,20394,30080,33920,36694,38532,42503,48907,50388,54491,59857,62445,63789,64752,70642,70893,71243,72855,88505,91407,117156,120034,120522,149502,341360,528215,992583,1170511,
#Partially deleted in new
chr3	78597245	79019459	chr3:78597245-79019459	1	-	78598912	78938742	789624	29	1682,197,309,153,407,249,141,112,336,155,43,27,198,172,115,236,122,167,169,82,206,172,125,128,139,121,158,327,1053,	0,2867,9487,17402,20389,30075,33915,36685,38527,42498,48902,50383,54486,59852,62440,63780,64747,70637,70888,71238,72850,88500,91402,117151,120029,120517,149497,341355,421161,
#Partially deleted in new
chr3	78597245	79019459	chr3:78597245-79019459	1	-	78598912	78938742	789624	29	1682,197,309,153,407,249,141,112,336,155,43,198,172,115,236,122,167,169,82,206,172,125,9,128,139,121,158,327,1053,	0,2867,9487,17402,20389,30075,33915,36685,38527,42498,48902,54486,59852,62440,63780,64747,70637,70888,71238,72850,88500,91402,96102,117151,120029,120517,149497,341355,421161,
#Partially deleted in new
chr3	78598687	79019015	chr3:78598687-79019015	3	-	78598912	79018461	0	29	240,197,309,153,407,249,145,108,336,155,43,198,172,122,232,122,167,169,82,206,172,125,9,128,139,121,158,327,609,	0,1425,8045,15960,18947,28633,32473,35247,37085,41056,47460,53044,58410,60998,62342,63305,69195,69446,69796,71408,87058,89960,94660,115709,118587,119075,148055,339913,419719,
#Partially deleted in new
chr3	78598810	79018544	chr3:78598810-79018544	1	-	78598912	79018461	0	29	117,197,309,153,407,249,145,108,171,155,43,198,172,122,232,122,167,169,82,206,172,125,9,128,139,121,158,327,138,	0,1302,7922,15837,18824,28510,32350,35124,36962,40933,47337,52921,58287,60875,62219,63182,69072,69323,69673,71285,86935,89837,94537,115586,118464,118952,147932,339790,419596,
#Partially deleted in new
chr3	78600112	78607289	chr3:78600112-78607289	0	-	78600112	78600112	8553170	3	197,309,44,	0,6620,7133,
#Partially deleted in new
chr3	78606807	78670540	chr3:78606807-78670540	0	-	78606807	78606807	8553170	19	234,153,407,249,145,108,336,155,43,27,198,172,122,232,122,167,169,82,445,	0,7840,10827,20513,24353,27127,28965,32936,39340,40821,44924,50290,52878,54222,55185,61075,61326,61676,63288,
#Partially deleted in new
chr3	78627406	78634580	chr3:78627406-78634580	0	-	78627406	78634580	789624	4	163,145,108,153,	0,3754,6528,7021,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	78659938	78715257	chr3:78659938-78715257	0	-	78659938	78659938	8553170	10	1323,122,167,169,82,206,172,125,9,861,	0,2054,7944,8195,8545,10157,25807,28709,33409,54458,
#Deleted in new
chr3	78667882	78670242	chr3:78667882-78670242	0	-	78667882	78670242	789624	4	167,169,94,147,	0,251,589,2213,
#Partially deleted in new
chr3	78692887	78714520	chr3:78692887-78714520	0	-	78692887	78692887	8553170	2	469,124,	0,21509,
#Deleted in new
chr3	78758973	78759374	chr3:78758973-78759374	7	+	78758973	78758973	16724991	1	401,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	78938008	78938292	chr3:78938008-78938292	3	-	78938008	78938008	8553170	1	284,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	79507886	79507969	chr3:79507886-79507969	3	+	79507886	79507886	5263520	1	83,	0,
#Partially deleted in new
chr3	79512804	79589942	chr3:79512804-79589942	0	-	79533071	79589911	789624	5	77,85,67,96,119,	0,13687,15016,20209,77019,
#Deleted in new
chr3	79957565	79958142	chr3:79957565-79958142	7	-	79957565	79957565	16724991	1	577,	0,
#Deleted in new
chr3	80163326	80164795	chr3:80163326-80164795	7	+	80163326	80163326	16724991	1	1469,	0,
#Deleted in new
chr3	80216260	80217234	chr3:80216260-80217234	7	+	80216260	80216260	16724991	1	974,	0,
#Deleted in new
chr3	80442080	80442305	chr3:80442080-80442305	7	+	80442080	80442080	16724991	1	225,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	80761041	80788963	chr3:80761041-80788963	3	-	80761041	80761041	8553170	3	164,116,123,	0,416,27799,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	80764896	80789354	chr3:80764896-80789354	3	+	80764896	80764896	789624	5	191,153,77,173,118,	0,15196,19144,23900,24340,
#Partially deleted in new
chr3	80993867	81095647	chr3:80993867-81095647	3	+	80993867	80993867	789624	2	60,536,	0,101244,
#Deleted in new
chr3	81366989	81368021	chr3:81366989-81368021	7	-	81366989	81366989	16724991	1	1032,	0,
#Partially deleted in new
chr3	81489698	81762161	chr3:81489698-81762161	3	-	81490406	81761517	0	16	765,118,131,185,172,111,99,128,116,210,91,136,126,116,170,787,	0,9411,45496,47212,88226,91466,96393,101338,104209,153082,156693,159157,160097,181139,215745,271676,
#Partially deleted in new
chr3	81489932	81743629	chr3:81489932-81743629	1	-	81490406	81743576	789624	16	531,118,131,185,172,111,99,128,116,210,91,136,126,116,170,73,	0,9177,45262,46978,87992,91232,96159,101104,103975,152848,156459,158923,159863,180905,215511,253624,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	81509475	81509664	chr3:81509475-81509664	3	+	81509475	81509475	8553170	1	189,	0,
#Partially deleted in new
chr3	81534666	81577943	chr3:81534666-81577943	0	-	81534666	81534666	8553170	3	659,185,19,	0,2244,43258,
#Deleted in new
chr3	81612237	81612805	chr3:81612237-81612805	7	-	81612237	81612237	16724991	1	568,	0,
#Deleted in new
chr3	81612789	81613075	chr3:81612789-81613075	7	+	81612789	81612789	16724991	1	286,	0,
#Partially deleted in new
chr3	81642570	81649878	chr3:81642570-81649878	0	-	81642570	81642570	8553170	4	420,113,136,83,	0,3821,6285,7225,
#Deleted in new
chr3	81648966	81650346	chr3:81648966-81650346	0	-	81648966	81648966	8553170	2	25,551,	0,829,
#Partially deleted in new
chr3	81654578	81670982	chr3:81654578-81670982	0	-	81654578	81654578	8553170	2	423,145,	0,16259,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	81762705	81764756	chr3:81762705-81764756	3	-	81762705	81762705	8553170	3	176,103,97,	0,1135,1954,
#Partially deleted in new
chr3	81840546	81922861	chr3:81840546-81922861	3	+	81840546	81840546	8553170	5	363,46,84,63,35,	0,79019,80145,81124,82280,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	81986137	82463675	chr3:81986137-82463675	3	+	81986137	81986137	789624	9	244,102,126,182,71,125,144,197,760,	0,199214,216191,429982,467344,468248,469534,471813,476778,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	81986151	82202454	chr3:81986151-82202454	0	+	81986151	81986151	8553170	4	230,66,102,126,	0,56573,199200,216177,
#Partially deleted in new
chr3	82319171	82320279	chr3:82319171-82320279	7	-	82319171	82319171	16724991	2	613,163,	0,945,
#Deleted in new
chr3	82806514	82808021	chr3:82806514-82808021	7	-	82806514	82806514	16724991	1	1507,	0,
#Deleted in new
chr3	83937044	83938236	chr3:83937044-83938236	7	+	83937044	83937044	16724991	1	1192,	0,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr3	84638405	84869575	chr3:84638405-84869575	3	-	84638405	84638405	789624	21	807,74,3457,120,285,70,141,151,173,184,293,135,124,74,109,99,221,300,71,122,298,	0,5807,27994,33178,34215,45203,47234,56959,57304,57752,107639,151232,153762,215536,221409,224317,224810,225300,230192,230497,230872,
#Deleted in new
chr3	84691680	84692591	chr3:84691680-84692591	7	-	84691680	84691680	16724991	1	911,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	84802448	84869628	chr3:84802448-84869628	1	-	84802448	84802448	8553170	4	304,71,122,38,	0,66149,66454,67142,
#Partially deleted in new
chr3	84868127	84881679	chr3:84868127-84881679	1	-	84868127	84868127	8553170	4	128,71,62,191,	0,470,654,13361,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	84884935	84893379	chr3:84884935-84893379	3	+	84884935	84884935	8553170	3	188,34,138,	0,7996,8306,
#Partially deleted in new
chr3	84958980	86074429	chr3:84958980-86074429	1	+	84959607	86066783	789624	10	688,27,150,153,138,171,91,179,126,7765,	0,767541,843066,924310,927209,953392,976786,1002488,1106624,1107684,
#Deleted in new
chr3	84958988	84959636	chr3:84958988-84959636	0	+	84958988	84958988	8553170	2	504,47,	0,601,
#Deleted in new
chr3	84959004	84960438	chr3:84959004-84960438	0	+	84959004	84959004	8553170	2	664,342,	0,1092,
#Partially deleted in new
chr3	84959545	86066835	chr3:84959545-86066835	3	+	84959607	86066783	789624	10	123,150,153,138,171,91,179,120,126,171,	0,842501,923745,926644,952827,976221,1001923,1019618,1106059,1107119,
#Deleted in new
chr3	85385709	85385792	chr3:85385709-85385792	3	+	85385709	85385709	5263520	1	83,	0,
#Partially deleted in new
chr3	85726481	86066783	chr3:85726481-86066783	1	+	85726481	86066783	789624	10	67,150,153,138,171,91,179,120,126,119,	0,75565,156809,159708,185891,209285,234987,252682,339123,340183,
#Partially deleted in new
chr3	85799986	85828050	chr3:85799986-85828050	3	-	85799986	85799986	5263520	4	437,149,132,50,	0,816,5467,28014,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	85992182	86028007	chr3:85992182-86028007	3	-	85992182	85992182	8553170	2	2532,124,	0,35701,
#Partially deleted in new
chr3	86012560	86015120	chr3:86012560-86015120	7	+	86012560	86012560	16724991	2	148,2119,	0,441,
#Deleted in new
chr3	86125215	86125287	chr3:86125215-86125287	3	+	86125215	86125215	8553170	1	72,	0,
#Deleted in new
chr3	86235320	86235424	chr3:86235320-86235424	3	+	86235320	86235320	8553170	1	104,	0,
#Partially deleted in new
chr3	86264554	86267361	chr3:86264554-86267361	3	-	86264554	86264554	8553170	2	339,366,	0,2441,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	86362131	86362474	chr3:86362131-86362474	3	+	86362131	86362131	8553170	1	343,	0,
#Partially deleted in new
chr3	86481942	86496996	chr3:86481942-86496996	3	+	86481942	86481942	789624	2	115,1206,	0,13848,
#Deleted in new
chr3	86816739	86817036	chr3:86816739-86817036	7	+	86816739	86816739	16724991	1	297,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	86876387	86968631	chr3:86876387-86968631	0	-	86947023	86968631	789624	6	701,136,230,73,58,42,	0,29631,31993,32598,70622,92202,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	86937968	86991107	chr3:86937968-86991107	3	-	86947023	86990743	789624	4	9099,534,277,490,	0,30621,40557,52649,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	86961905	86991119	chr3:86961905-86991119	1	-	86963041	86990743	789624	4	1162,534,277,502,	0,6684,16620,28712,
#Partially deleted in new
chr3	86968702	86990702	chr3:86968702-86990702	0	-	86968702	86990702	789624	3	421,118,85,	0,9823,21915,
#Deleted in new
chr3	87051191	87052738	chr3:87051191-87052738	7	-	87051191	87051191	16724991	1	1547,	0,
#Partially deleted in new
chr3	87089128	87140346	chr3:87089128-87140346	0	+	87089128	87089128	8553170	2	479,74,	0,51144,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	87089279	87098702	chr3:87089279-87098702	1	+	87089279	87089279	789624	2	328,3972,	0,5451,
#Partially deleted in new
chr3	87089302	87140352	chr3:87089302-87140352	1	+	87089302	87089302	8553170	3	305,140,80,	0,46882,50970,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	87089360	87157069	chr3:87089360-87157069	3	+	87089360	87089360	789624	3	247,62,278,	0,64977,67431,
#Deleted in new
chr3	87226188	87226277	chr3:87226188-87226277	3	-	87226188	87226188	5263520	1	89,	0,
#Partially deleted in new
chr3	87227270	87255548	chr3:87227270-87255548	1	+	87227553	87253822	0	5	286,195,103,107,1837,	0,18443,22604,26133,26441,
#Partially deleted in new
chr3	87227284	87255499	chr3:87227284-87255499	3	+	87227522	87253822	0	6	272,92,195,103,107,1788,	0,13414,18429,22590,26119,26427,
#Partially deleted in new
chr3	87227301	87254224	chr3:87227301-87254224	1	+	87227522	87253822	789624	6	255,92,105,103,107,513,	0,13397,18412,22573,26102,26410,
#Deleted in new
chr3	87253048	87253913	chr3:87253048-87253913	0	+	87253048	87253048	8553170	2	462,202,	0,663,
#Partially deleted in new
chr3	87259403	87276587	chr3:87259403-87276587	3	-	87259893	87276462	0	6	701,61,165,225,72,267,	0,1869,2667,4884,13943,16917,
#Partially deleted in new
chr3	87259740	87276504	chr3:87259740-87276504	1	-	87259893	87276462	0	6	364,61,165,225,150,184,	0,1532,2330,4547,13606,16580,
#Partially deleted in new
chr3	87259894	87276462	chr3:87259894-87276462	0	-	87259894	87276462	789624	5	210,61,165,72,142,	0,1378,2176,13452,16426,
#Partially deleted in new
chr3	87259896	87276462	chr3:87259896-87276462	1	-	87260033	87276462	789624	4	208,225,72,142,	0,4391,13450,16424,
#Partially deleted in new
chr3	87323267	87324723	chr3:87323267-87324723	7	+	87323267	87323267	16724991	1	1456,	0,
#Deleted in new
chr3	87594837	87595376	chr3:87594837-87595376	7	+	87594837	87594837	16724991	1	539,	0,
#Deleted in new
chr3	87630300	87631619	chr3:87630300-87631619	7	-	87630300	87630300	16724991	1	1319,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	87641411	87793629	chr3:87641411-87793629	3	-	87641411	87641411	8553170	5	3091,110,329,309,417,	0,38858,40994,90030,151801,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	87742542	87742649	chr3:87742542-87742649	3	-	87742542	87742542	8553170	1	107,	0,
#Deleted in new
chr3	87910219	87910345	chr3:87910219-87910345	3	+	87910219	87910219	8553170	1	126,	0,
#Deleted in new
chr3	87990695	87993835	chr3:87990695-87993835	3	+	87990749	87991850	789624	1	3140,	0,
#Deleted in new
chr3	88051943	88059048	chr3:88051943-88059048	1	-	88055472	88055976	789624	3	4056,205,234,	0,6075,6871,
#Deleted in new
chr3	88052011	88057309	chr3:88052011-88057309	1	-	88055472	88055976	789624	1	5298,	0,
#Deleted in new
chr3	88055413	88059068	chr3:88055413-88059068	1	-	88055472	88055976	789624	4	586,102,205,254,	0,1777,2605,3401,
#Partially deleted in new
chr3	88055425	88149885	chr3:88055425-88149885	3	-	88055472	88055976	789624	4	574,205,109,175,	0,2593,85544,94285,
#Partially deleted in new
chr3	88055657	88149815	chr3:88055657-88149815	0	-	88055657	88055976	789624	3	342,109,105,	0,85312,94053,
#Deleted in new
chr3	88057637	88058945	chr3:88057637-88058945	0	-	88057637	88057637	8553170	2	586,131,	0,1177,
#Partially deleted in new
chr3	88059273	88135498	chr3:88059273-88135498	0	+	88059273	88059273	8553170	7	232,146,82,136,203,140,438,	0,26983,53841,66860,69535,70413,75787,
#Partially deleted in new
chr3	88059273	88144665	chr3:88059273-88144665	3	+	88059319	88141652	789624	9	232,146,82,136,203,140,142,2344,3021,	0,26983,53841,66860,69535,70413,75787,79431,82371,
#Partially deleted in new
chr3	88086319	88129055	chr3:88086319-88129055	0	+	88086319	88086319	8553170	4	83,82,136,247,	0,26795,39814,42489,
#Deleted in new
chr3	88095407	88095968	chr3:88095407-88095968	7	-	88095407	88095407	16724991	1	561,	0,
#Deleted in new
chr3	88139111	88144664	chr3:88139111-88144664	1	+	88139310	88141652	789624	2	1937,3020,	0,2533,
#Partially deleted in new
chr3	88149742	88157968	chr3:88149742-88157968	3	+	88150052	88156635	789624	3	443,242,1948,	0,3487,6278,
#Partially deleted in new
chr3	88149986	88156944	chr3:88149986-88156944	1	+	88150052	88156174	789624	3	199,242,818,	0,3243,6140,
#Partially deleted in new
chr3	88150603	88153346	chr3:88150603-88153346	0	+	88150603	88150603	8553170	2	469,117,	0,2626,
#Partially deleted in new
chr3	88156888	88168729	chr3:88156888-88168729	0	+	88156888	88156888	8553170	2	57,376,	0,11465,
#Deleted in new
chr3	88317155	88319022	chr3:88317155-88319022	7	+	88317155	88317155	16724991	1	1867,	0,
#Partially deleted in new
chr3	88338412	88467562	chr3:88338412-88467562	3	+	88465357	88467562	789624	2	231,2475,	0,126675,
#Partially deleted in new
chr3	88338415	88399696	chr3:88338415-88399696	0	+	88338415	88338415	8553170	3	228,134,81,	0,4736,61200,
#Partially deleted in new
chr3	88338457	88465308	chr3:88338457-88465308	0	+	88338457	88338457	8553170	3	186,168,221,	0,61158,126630,
#Partially deleted in new
chr3	88338461	88465342	chr3:88338461-88465342	0	+	88338461	88338461	8553170	3	182,134,255,	0,4690,126626,
#Partially deleted in new
chr3	88338462	88465239	chr3:88338462-88465239	0	+	88338462	88338462	8553170	3	181,211,152,	0,61153,126625,
#Partially deleted in new
chr3	88338522	88382833	chr3:88338522-88382833	0	+	88338522	88338522	8553170	2	121,249,	0,44062,
#Partially deleted in new
chr3	88601060	88601402	chr3:88601060-88601402	7	+	88601060	88601060	16724991	1	342,	0,
#Partially deleted in new
chr3	88948141	88950928	chr3:88948141-88950928	7	+	88948141	88948141	16724991	1	2787,	0,
#Partially deleted in new
chr3	89047441	89048434	chr3:89047441-89048434	7	-	89047441	89047441	16724991	1	993,	0,
#Partially deleted in new
chr3	89107523	89482134	chr3:89107523-89482134	3	+	89107748	89479502	0	17	313,65,661,156,336,125,163,103,65,126,186,62,210,150,194,156,2738,	0,19685,102336,233392,234231,288313,291794,299745,300543,305617,311681,321582,323626,341701,342653,364940,371873,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	89107661	89400345	chr3:89107661-89400345	1	+	89107748	89399506	0	7	175,65,661,156,336,125,1028,	0,19547,102198,233254,234093,288175,291656,
#Partially deleted in new
chr3	89107675	89479659	chr3:89107675-89479659	1	+	89107748	89479404	789624	17	161,65,661,156,336,125,163,103,65,126,186,62,210,150,194,59,263,	0,19533,102184,233240,234079,288161,291642,299593,300391,305465,311529,321430,323474,341549,342501,364788,371721,
#Partially deleted in new
chr3	89283015	89314603	chr3:89283015-89314603	3	-	89283015	89283015	8553170	3	805,106,54,	0,29776,31534,
#Deleted in new
chr3	89587885	89588570	chr3:89587885-89588570	7	-	89587885	89587885	16724991	1	685,	0,
#Deleted in new
chr3	89588713	89590097	chr3:89588713-89590097	7	-	89588713	89588713	16724991	1	1384,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	90030283	90030495	chr3:90030283-90030495	3	+	90030283	90030283	8553170	1	212,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	90184633	90184733	chr3:90184633-90184733	3	+	90184633	90184633	8553170	1	100,	0,
#Partially deleted in new
chr3	90202315	90257415	chr3:90202315-90257415	7	-	90202315	90202315	16724991	14	161,226,152,169,168,188,116,122,126,132,123,87,25,156,	0,3698,5894,11497,13280,19602,23218,25096,27528,32058,32295,39660,52091,54944,
#Partially deleted in new
chr3	90261413	90261708	chr3:90261413-90261708	7	-	90261413	90261413	16724991	1	295,	0,
#Deleted in new
chr3	91356754	91356914	chr3:91356754-91356914	3	+	91356754	91356754	8553170	1	160,	0,
#Partially deleted in new
chr3	91374235	91513775	chr3:91374235-91513775	7	-	91374235	91374235	16724991	7	231,69,83,127,187,73,68,	0,13730,42311,47549,109532,114644,139472,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	93843763	93843862	chr3:93843763-93843862	3	+	93843763	93843763	8553170	1	99,	0,
#Partially deleted in new
chr3	93873032	93974089	chr3:93873032-93974089	3	-	93874244	93973749	0	15	1373,226,152,169,168,190,116,122,126,132,123,87,25,158,416,	0,3933,6130,11695,13303,19900,23543,25415,27771,32751,32988,37586,51207,54217,100641,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	93873108	93958754	chr3:93873108-93958754	0	-	93873108	93873108	8553170	15	1297,226,152,169,168,190,116,122,126,132,123,87,25,158,244,	0,3857,6054,11619,13227,19824,23467,25339,27695,32675,32912,37510,51131,54141,85402,
#Partially deleted in new
chr3	93873123	93980003	chr3:93873123-93980003	1	-	93874244	93979677	8553170	15	1282,226,152,169,168,190,116,122,126,132,123,87,25,158,360,	0,3842,6039,11604,13212,19809,23452,25324,27680,32660,32897,37495,51116,54126,106520,
#Partially deleted in new
chr3	93873123	93973933	chr3:93873123-93973933	1	-	93874244	93973749	789624	16	1282,226,152,169,168,190,116,122,126,132,123,87,25,158,96,260,	0,3842,6039,11604,13212,19809,23452,25324,27680,32660,32897,37495,51116,54126,55578,100550,
#Partially deleted in new
chr3	93873131	93973833	chr3:93873131-93973833	1	-	93874244	93973749	789624	16	282,162,226,152,169,168,190,116,122,126,132,123,87,25,158,160,	0,1112,3834,6031,11596,13204,19801,23444,25316,27672,32652,32889,37487,51108,54118,100542,
#Partially deleted in new
chr3	93873135	93973888	chr3:93873135-93973888	1	-	93874378	93973749	8553170	14	1270,152,169,168,190,116,122,126,132,123,87,25,158,215,	0,6027,11592,13200,19797,23440,25312,27668,32648,32885,37483,51104,54114,100538,
#Partially deleted in new
chr3	93873190	93973897	chr3:93873190-93973897	1	-	93874244	93973749	789624	15	1215,226,152,169,168,190,116,122,126,87,123,87,25,158,224,	0,3775,5972,11537,13145,19742,23385,25257,27613,32638,32830,37428,51049,54059,100483,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	93877002	93886413	chr3:93877002-93886413	0	-	93881253	93886413	8553170	5	189,152,188,169,78,	0,2160,4128,7725,9333,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	93877050	93973728	chr3:93877050-93973728	0	-	93923814	93973728	8553170	15	141,152,169,168,190,116,122,126,132,123,87,120,25,158,55,	0,2112,7677,9285,15882,19525,21397,23753,28733,28970,33568,46724,47189,50199,96623,
#Partially deleted in new
chr3	93905820	93973637	chr3:93905820-93973637	0	-	93905820	93906096	789624	6	95,123,87,25,158,75,	0,200,4798,18419,21429,67742,
#Partially deleted in new
chr3	93906039	93911157	chr3:93906039-93911157	0	-	93906039	93906039	8553170	2	104,539,	0,4579,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	93967925	93968020	chr3:93967925-93968020	3	+	93967925	93967925	8553170	1	95,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	93968491	93979884	chr3:93968491-93979884	0	-	93968491	93968491	8553170	4	232,75,94,241,	0,5071,10470,11152,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	93977028	93977135	chr3:93977028-93977135	3	+	93977028	93977028	8553170	1	107,	0,
#Partially deleted in new
chr3	93980138	94055668	chr3:93980138-94055668	1	+	94003837	94053263	789624	9	344,250,106,203,109,226,117,69,2482,	0,23520,55192,56413,59741,62876,69267,70685,73048,
#Partially deleted in new
chr3	93980141	94055279	chr3:93980141-94055279	3	+	93980423	94053263	789624	8	341,106,203,109,226,117,69,2093,	0,55189,56410,59738,62873,69264,70682,73045,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	93980141	93996684	chr3:93980141-93996684	0	+	93980141	93980141	8553170	4	341,40,71,122,	0,8530,15732,16421,
#Partially deleted in new
chr3	93980148	94054154	chr3:93980148-94054154	1	+	93980423	94053263	789624	10	334,71,250,106,203,109,226,117,69,968,	0,15725,23510,55182,56403,59731,62866,69257,70675,73038,
#Partially deleted in new
chr3	93980154	94054069	chr3:93980154-94054069	1	+	93980423	94053263	789624	11	328,71,250,106,203,109,226,117,69,114,613,	0,15719,23504,55176,56397,59725,62860,69251,70669,73032,73302,
#Partially deleted in new
chr3	93980169	94055281	chr3:93980169-94055281	0	+	93980423	94036592	789624	8	313,71,203,109,226,117,69,2095,	0,15704,56382,59710,62845,69236,70654,73017,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	93980189	94055279	chr3:93980189-94055279	0	+	93980423	94003676	789624	11	293,71,122,250,106,203,109,226,117,69,2093,	0,15684,16373,23469,55141,56362,59690,62825,69216,70634,72997,
#Partially deleted in new
chr3	93980213	94039915	chr3:93980213-94039915	0	+	93980213	93980213	8553170	5	269,67,106,203,36,	0,15664,55117,56338,59666,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	93980269	94003902	chr3:93980269-94003902	0	+	93980269	93980269	8553170	4	213,71,137,244,	0,15604,16278,23389,
#Partially deleted in new
chr3	93980287	94003908	chr3:93980287-94003908	0	+	93980287	93980287	8553170	2	195,250,	0,23371,
#Deleted in new
chr3	93988633	93988946	chr3:93988633-93988946	7	-	93988633	93988633	16724991	1	313,	0,
#Partially deleted in new
chr3	94014368	94028610	chr3:94014368-94028610	3	-	94014384	94015269	789624	2	914,244,	0,13998,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	94047835	94062841	chr3:94047835-94062841	0	-	94047835	94047835	8553170	3	343,193,96,	0,13578,14910,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	94057921	94062987	chr3:94057921-94062987	1	-	94060947	94061511	789624	2	3685,242,	0,4824,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	94057923	94063223	chr3:94057923-94063223	3	-	94060947	94061511	789624	2	3683,355,	0,4945,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	94058724	94062899	chr3:94058724-94062899	0	-	94060947	94061511	789624	3	172,1628,31,	0,1254,4144,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	94058753	94062899	chr3:94058753-94062899	1	-	94060947	94061511	789624	3	143,1628,31,	0,1225,4115,
#Partially deleted in new
chr3	94061168	94063389	chr3:94061168-94063389	0	-	94061168	94061511	789624	2	438,153,	0,2068,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	94062915	94128545	chr3:94062915-94128545	3	+	94063126	94126490	789624	6	223,110,344,155,122,2335,	0,1521,21191,31224,32117,63295,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	94062979	94064403	chr3:94062979-94064403	0	+	94062979	94062979	8553170	2	159,592,	0,832,
#Partially deleted in new
chr3	94062979	94095094	chr3:94062979-94095094	0	+	94063126	94094155	789624	5	159,110,96,155,62,	0,1457,21375,31160,32053,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	94062989	94085382	chr3:94062989-94085382	0	+	94062989	94062989	8553170	3	149,110,1276,	0,1447,21117,
#Partially deleted in new
chr3	94062997	94082173	chr3:94062997-94082173	0	+	94062997	94062997	8553170	3	141,110,565,	0,1439,18611,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	94063010	94064518	chr3:94063010-94064518	0	+	94063010	94063010	8553170	3	128,168,82,	0,801,1426,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	94063060	94084176	chr3:94063060-94084176	0	+	94063060	94063060	8553170	4	78,313,110,70,	0,751,1376,21046,
#Partially deleted in new
chr3	94075911	94077175	chr3:94075911-94077175	7	-	94075911	94075911	16724991	1	1264,	0,
#Partially deleted in new
chr3	94076341	94081821	chr3:94076341-94081821	0	+	94076341	94076341	8553170	2	257,213,	0,5267,
#Deleted in new
chr3	94506765	94507620	chr3:94506765-94507620	7	-	94506765	94506765	16724991	1	855,	0,
#Deleted in new
chr3	94935759	94936120	chr3:94935759-94936120	7	-	94935759	94935759	16724991	1	361,	0,
#Deleted in new
chr3	94937085	94938024	chr3:94937085-94938024	7	-	94937085	94937085	16724991	1	939,	0,
#Partially deleted in new
chr3	94938171	95152302	chr3:94938171-95152302	0	+	94938171	94938171	8553170	4	155,137,130,273,	0,149986,200014,213858,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	94938262	94991328	chr3:94938262-94991328	1	+	94938262	94938262	789624	8	64,198,84,170,134,106,168,117,	0,24636,33008,42107,50283,51066,51640,52949,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	94938273	94990070	chr3:94938273-94990070	0	+	94938273	94938273	8553170	5	53,170,134,106,168,	0,42096,50272,51055,51629,
#Partially deleted in new
chr3	94938276	95152509	chr3:94938276-95152509	3	+	94938276	94938276	8553170	4	50,137,90,480,	0,149881,199949,213753,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	94962929	94991243	chr3:94962929-94991243	0	+	94962929	94962929	8553170	6	167,170,134,106,168,32,	0,17440,25616,26399,26973,28282,
#Partially deleted in new
chr3	95171919	95172377	chr3:95171919-95172377	7	+	95171919	95171919	16724991	1	458,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	95654422	95683193	chr3:95654422-95683193	7	-	95654422	95654422	16724991	5	1425,97,356,124,593,	0,8821,13987,26579,28178,
#Deleted in new
chr3	95654967	95655838	chr3:95654967-95655838	5	-	95654967	95654967	16724991	1	871,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	95668319	95682721	chr3:95668319-95682721	4	-	95668319	95668319	16724991	3	446,24,121,	0,13138,14281,
#Partially deleted in new
chr3	96244731	96245335	chr3:96244731-96245335	7	-	96244731	96244731	16724991	2	61,235,	0,369,
#Deleted in new
chr3	96349553	96350939	chr3:96349553-96350939	7	+	96349553	96349553	16724991	1	1386,	0,
#Partially deleted in new
chr3	96359963	96360039	chr3:96359963-96360039	3	+	96359963	96359963	5263520	1	76,	0,
#Deleted in new
chr3	96566356	96567103	chr3:96566356-96567103	7	+	96566356	96566356	16724991	1	747,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	96608813	96608917	chr3:96608813-96608917	3	-	96608813	96608813	8553170	1	104,	0,
#Deleted in new
chr3	96617187	96618236	chr3:96617187-96618236	3	-	96617198	96617273	789624	1	1049,	0,
#Deleted in new
chr3	96619303	96619831	chr3:96619303-96619831	7	+	96619303	96619303	16724991	1	528,	0,
#Deleted in new
chr3	96753184	96754671	chr3:96753184-96754671	7	+	96753184	96753184	16724991	1	1487,	0,
#Partially deleted in new
chr3	96776944	96777683	chr3:96776944-96777683	7	+	96776944	96776944	16724991	1	739,	0,
#Partially deleted in new
chr3	96814580	97244696	chr3:96814580-97244696	1	+	96814623	97244325	789624	5	428,65,664,156,745,	0,52244,172749,411683,429371,
#Partially deleted in new
chr3	96814585	97749241	chr3:96814585-97749241	3	+	96814623	97748701	789624	18	423,65,664,156,336,125,163,109,71,126,186,126,62,210,150,194,150,655,	0,52239,172744,411678,429366,590564,633982,660766,664708,669348,717772,778026,796207,823287,905675,921339,932837,934001,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	96814790	97010134	chr3:96814790-97010134	0	+	96814790	97010029	789624	4	218,65,664,131,	0,52034,172539,195213,
#Partially deleted in new
chr3	97439609	97747531	chr3:97439609-97747531	0	+	97475359	97745380	789624	13	48,57,163,109,71,126,186,62,210,150,194,205,109,	0,1806,8958,35742,39684,44324,92748,171183,198263,280651,296315,305749,307813,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	97439609	97610824	chr3:97439609-97610824	0	+	97448724	97559655	789624	16	48,57,163,64,109,71,126,186,71,130,24,52,65,126,89,32,	0,1806,8958,26809,35742,39684,44324,92748,119981,120857,130314,133065,150606,153002,166550,171183,
#Partially deleted in new
chr3	97441415	97638063	chr3:97441415-97638063	0	+	97475359	97612431	789624	10	57,163,109,71,126,186,126,62,98,191,	0,7152,33936,37878,42518,90942,151196,169377,170962,196457,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	97481176	97481506	chr3:97481176-97481506	7	-	97481176	97481176	16724991	1	330,	0,
#Partially deleted in new
chr3	97747519	97752460	chr3:97747519-97752460	0	+	97747519	97748701	789624	3	53,356,272,	0,1067,4669,
#Partially deleted in new
chr3	97759522	97761532	chr3:97759522-97761532	3	+	97759522	97759522	8553170	1	2010,	0,
#Partially deleted in new
chr3	97764520	97798535	chr3:97764520-97798535	1	+	97768107	97798049	0	9	457,99,150,62,69,95,130,56,512,	0,1470,3560,15638,16094,20434,23469,27250,33503,
#Partially deleted in new
chr3	97764520	97798535	chr3:97764520-97798535	1	+	97768107	97798049	0	9	457,59,150,62,69,95,130,56,512,	0,2111,3560,15638,16094,20434,23469,27250,33503,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	97764520	97801109	chr3:97764520-97801109	0	+	97768107	97798049	0	10	457,99,150,62,69,95,130,56,180,407,	0,1470,3560,15638,16094,20434,23469,27250,33503,36182,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	97764527	97801242	chr3:97764527-97801242	3	+	97768107	97798049	0	8	450,150,62,69,95,130,56,3219,	0,3553,15631,16087,20427,23462,27243,33496,
#Partially deleted in new
chr3	97764532	97788003	chr3:97764532-97788003	0	+	97768107	97788003	789624	7	445,59,150,62,69,95,14,	0,2099,3548,15626,16082,20422,23457,
#Partially deleted in new
chr3	97764766	97791347	chr3:97764766-97791347	0	+	97764766	97764766	8553170	7	211,150,62,69,95,130,134,	0,3314,15392,15848,20188,23223,26447,
#Partially deleted in new
chr3	97780173	97798170	chr3:97780173-97798170	0	+	97780173	97798057	789624	7	47,69,95,130,56,13,147,	0,441,4781,7816,11597,11779,17850,
#Partially deleted in new
chr3	97785016	97798535	chr3:97785016-97798535	0	+	97785016	97798024	789624	3	33,130,512,	0,2973,13007,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	97793371	97801107	chr3:97793371-97801107	0	+	97793371	97793371	8553170	3	31,180,342,	0,4652,7394,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	97800732	97821884	chr3:97800732-97821884	3	-	97800732	97800732	8553170	3	162,100,198,	0,17671,20954,
#Partially deleted in new
chr3	97822039	97944963	chr3:97822039-97944963	3	+	97822206	97943314	789624	22	316,67,431,6196,45,116,148,137,115,36,134,127,143,127,33,110,127,140,124,159,160,1738,	0,21155,42177,49802,57664,57945,59032,64591,66301,67315,70820,73919,76843,77097,78413,90127,93570,111654,114745,119108,120244,121186,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	97836985	97874691	chr3:97836985-97874691	3	-	97836985	97836985	8553170	6	97,42,117,116,80,194,	0,3670,30067,36182,37231,37512,
#Partially deleted in new
chr3	97924211	97944957	chr3:97924211-97944957	0	+	97924211	97924211	8553170	7	200,140,124,159,160,345,124,	0,9482,12573,16936,18072,19014,20622,
#Partially deleted in new
chr3	97924211	97941261	chr3:97924211-97941261	0	+	97924396	97941261	789624	4	200,140,124,114,	0,9482,12573,16936,
#Partially deleted in new
chr3	97941817	97972457	chr3:97941817-97972457	1	-	97945183	97967593	0	10	3525,90,89,172,103,104,129,120,471,544,	0,3980,5543,8026,8968,12574,17233,19771,25344,30096,
#Partially deleted in new
chr3	97944350	97972451	chr3:97944350-97972451	1	-	97945183	97967593	0	10	992,90,89,172,103,104,129,120,471,71,	0,1447,3010,5493,6435,10041,14700,17238,22811,28030,
#Partially deleted in new
chr3	97944405	97950024	chr3:97944405-97950024	0	-	97944405	97944405	8553170	4	937,90,89,181,	0,1392,2955,5438,
#Partially deleted in new
chr3	97944559	97972087	chr3:97944559-97972087	3	-	97945183	97967593	0	10	783,90,89,169,103,104,129,120,471,174,	0,1238,2801,5284,6226,9832,14491,17029,22602,27354,
#Partially deleted in new
chr3	97945176	97951183	chr3:97945176-97951183	0	-	97945176	97945176	8553170	5	166,90,89,169,398,	0,621,2184,4667,5609,
#Deleted in new
chr3	97945337	97947401	chr3:97945337-97947401	0	-	97945844	97947401	789624	2	550,41,	0,2023,
#Partially deleted in new
chr3	97947415	97967623	chr3:97947415-97967623	0	-	97952194	97967593	0	8	34,172,103,101,104,129,120,462,	0,2428,3370,4736,6976,11635,14173,19746,
#Partially deleted in new
chr3	97954006	97961678	chr3:97954006-97961678	0	-	97954387	97961678	789624	3	489,129,90,	0,5044,7582,
#Partially deleted in new
chr3	97967256	97971877	chr3:97967256-97971877	0	-	97967256	97967593	789624	2	376,288,	0,4333,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	97973011	97975056	chr3:97973011-97975056	3	+	97973011	97973011	8553170	3	598,111,191,	0,1083,1854,
#Partially deleted in new
chr3	97986672	98034989	chr3:97986672-98034989	1	-	97986682	98034987	789624	9	310,197,153,141,83,224,68,113,127,	0,6179,14942,21091,22283,25671,30982,38894,48190,
#Partially deleted in new
chr3	97986682	98035304	chr3:97986682-98035304	3	-	97986682	98034987	789624	10	300,197,153,141,83,224,68,113,127,115,	0,6169,14932,21081,22273,25661,30972,38884,48180,48507,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	97997442	98035304	chr3:97997442-98035304	0	-	97997442	97997442	8553170	6	4325,78,68,113,127,115,	0,14901,20212,28124,37420,37747,
#Deleted in new
chr3	98053373	98053739	chr3:98053373-98053739	7	+	98053373	98053373	16724991	1	366,	0,
#Deleted in new
chr3	98064471	98065396	chr3:98064471-98065396	3	+	98064471	98065396	8553170	1	925,	0,
#Deleted in new
chr3	98087172	98088102	chr3:98087172-98088102	3	+	98087172	98088102	789624	1	930,	0,
#Partially deleted in new
chr3	98099907	98148134	chr3:98099907-98148134	3	-	98099907	98099907	8553170	2	373,94,	0,48133,
#Partially deleted in new
chr3	98100792	98105672	chr3:98100792-98105672	7	+	98100792	98100792	16724991	2	45,940,	0,3940,
#Deleted in new
chr3	98104753	98105672	chr3:98104753-98105672	5	+	98104753	98104753	16724991	1	919,	0,
#Deleted in new
chr3	98119190	98119731	chr3:98119190-98119731	7	+	98119190	98119190	16724991	1	541,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	98130720	98138548	chr3:98130720-98138548	3	+	98132697	98133639	789624	2	130,5869,	0,1959,
#Deleted in new
chr3	98132697	98133639	chr3:98132697-98133639	1	+	98132697	98133639	789624	1	942,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	98147478	98156614	chr3:98147478-98156614	3	+	98149385	98150318	789624	2	76,7247,	0,1889,
#Deleted in new
chr3	98149325	98150405	chr3:98149325-98150405	1	+	98149385	98150318	789624	1	1080,	0,
#Deleted in new
chr3	98166695	98169774	chr3:98166695-98169774	3	+	98168699	98169641	789624	2	136,1093,	0,1986,
#Deleted in new
chr3	98168699	98169733	chr3:98168699-98169733	1	+	98168699	98169733	789624	2	925,5,	0,1029,
#Partially deleted in new
chr3	98197210	98198138	chr3:98197210-98198138	7	+	98197210	98197210	16724991	1	928,	0,
#Partially deleted in new
chr3	98207422	98208341	chr3:98207422-98208341	7	+	98207422	98207422	16724991	1	919,	0,
#Partially deleted in new
chr3	98222043	98222966	chr3:98222043-98222966	7	+	98222043	98222043	16724991	1	923,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	98233650	98457898	chr3:98233650-98457898	3	+	98233650	98233650	8553170	4	26,123,39,204,	0,78235,108740,224044,
#Partially deleted in new
chr3	98238351	98239281	chr3:98238351-98239281	7	+	98238351	98238351	16724991	1	930,	0,
#Partially deleted in new
chr3	98263251	98265262	chr3:98263251-98265262	1	+	98264332	98265262	789624	2	84,948,	0,1063,
#Partially deleted in new
chr3	98264243	98265356	chr3:98264243-98265356	1	+	98264332	98265262	789624	1	1113,	0,
#Partially deleted in new
chr3	98264284	98265262	chr3:98264284-98265262	3	+	98264284	98265262	789624	1	978,	0,
#Partially deleted in new
chr3	98282887	98283832	chr3:98282887-98283832	1	+	98282887	98283832	789624	1	945,	0,
#Partially deleted in new
chr3	98282902	98283832	chr3:98282902-98283832	3	+	98282902	98283832	789624	1	930,	0,
#Partially deleted in new
chr3	98306751	98312843	chr3:98306751-98312843	3	+	98311912	98312843	8553170	2	87,958,	0,5134,
#Partially deleted in new
chr3	98353853	98354819	chr3:98353853-98354819	3	+	98353853	98354819	789624	1	966,	0,
#Deleted in new
chr3	98390665	98391631	chr3:98390665-98391631	3	+	98390665	98391631	789624	1	966,	0,
#Deleted in new
chr3	98434033	98434847	chr3:98434033-98434847	7	+	98434033	98434033	16724991	1	814,	0,
#Partially deleted in new
chr3	98463200	98472924	chr3:98463200-98472924	3	+	98469576	98470503	789624	2	107,3359,	0,6365,
#Deleted in new
chr3	98469479	98470576	chr3:98469479-98470576	1	+	98469576	98470503	789624	1	1097,	0,
#Deleted in new
chr3	98497603	98498663	chr3:98497603-98498663	3	+	98497680	98498631	789624	1	1060,	0,
#Partially deleted in new
chr3	98497911	98522887	chr3:98497911-98522887	1	-	98498175	98522855	789624	4	272,138,111,39,	0,19140,20973,24937,
#Partially deleted in new
chr3	98500839	98522922	chr3:98500839-98522922	1	-	98501428	98521424	789624	6	681,138,111,310,66,74,	0,16212,18045,20293,20813,22009,
#Partially deleted in new
chr3	98515472	98523043	chr3:98515472-98523043	1	-	98516658	98521424	789624	5	1407,138,111,310,195,	0,1579,3412,5660,7376,
#Partially deleted in new
chr3	98515479	98523066	chr3:98515479-98523066	3	-	98516658	98521424	789624	6	1400,138,111,310,51,218,	0,1572,3405,5653,6173,7369,
#Partially deleted in new
chr3	98515482	98523018	chr3:98515482-98523018	1	-	98516658	98522855	789624	6	1397,138,111,310,44,170,	0,1569,3402,5650,6170,7366,
#Partially deleted in new
chr3	98515482	98522985	chr3:98515482-98522985	1	-	98516658	98521424	789624	6	1397,138,111,310,66,137,	0,1569,3402,5650,6170,7366,
#Partially deleted in new
chr3	98515482	98522514	chr3:98515482-98522514	1	-	98516658	98521424	789624	5	1397,138,111,310,862,	0,1569,3402,5650,6170,
#Partially deleted in new
chr3	98515482	98521283	chr3:98515482-98521283	0	-	98515764	98521283	789624	4	350,138,111,151,	0,1569,3402,5650,
#Deleted in new
chr3	98515483	98517160	chr3:98515483-98517160	0	-	98515802	98517160	789624	3	349,80,109,	0,1316,1568,
#Partially deleted in new
chr3	98515486	98522959	chr3:98515486-98522959	1	-	98516658	98521424	789624	6	1393,138,111,305,66,111,	0,1565,3398,5646,6166,7362,
#Partially deleted in new
chr3	98516543	98522905	chr3:98516543-98522905	1	-	98516658	98522855	789624	4	336,138,111,57,	0,508,2341,6305,
#Partially deleted in new
chr3	98516652	98522754	chr3:98516652-98522754	1	-	98516658	98521424	789624	5	227,138,111,310,213,	0,399,2232,4480,5889,
#Deleted in new
chr3	98516653	98517345	chr3:98516653-98517345	0	-	98516653	98516653	8553170	2	226,294,	0,398,
#Partially deleted in new
chr3	98516684	98522964	chr3:98516684-98522964	0	-	98516684	98521358	789624	6	195,138,111,245,66,116,	0,367,2200,4448,4968,6164,
#Partially deleted in new
chr3	98516686	98522605	chr3:98516686-98522605	0	-	98516686	98521424	789624	6	193,138,111,305,51,64,	0,365,2198,4446,4966,5855,
#Partially deleted in new
chr3	98516702	98522931	chr3:98516702-98522931	0	-	98516702	98521424	789624	6	177,138,111,305,51,83,	0,349,2182,4430,4950,6146,
#Partially deleted in new
chr3	98516710	98523041	chr3:98516710-98523041	0	-	98516710	98521424	789624	5	169,138,111,305,193,	0,341,2174,4422,6138,
#Partially deleted in new
chr3	98516710	98522899	chr3:98516710-98522899	0	-	98516710	98518942	789624	5	169,138,111,113,51,	0,341,2174,4619,6138,
#Partially deleted in new
chr3	98516773	98522902	chr3:98516773-98522902	0	-	98516773	98518942	789624	6	106,138,111,113,51,54,	0,278,2111,4556,4879,6075,
#Partially deleted in new
chr3	98516776	98522955	chr3:98516776-98522955	0	-	98516776	98516776	8553170	6	103,32,111,310,44,107,	0,381,2108,4356,4876,6072,
#Partially deleted in new
chr3	98516781	98522846	chr3:98516781-98522846	0	-	98516781	98521424	789624	6	98,138,111,310,51,305,	0,270,2103,4351,4871,5760,
#Partially deleted in new
chr3	98516822	98522875	chr3:98516822-98522875	0	-	98516822	98516822	8553170	4	367,111,310,27,	0,2062,4310,6026,
#Partially deleted in new
chr3	98517051	98522606	chr3:98517051-98522606	0	-	98517051	98521424	789624	5	138,111,305,44,65,	0,1833,4081,4601,5490,
#Partially deleted in new
chr3	98517061	98522851	chr3:98517061-98522851	0	-	98517061	98521424	789624	5	128,111,310,44,310,	0,1823,4071,4591,5480,
#Partially deleted in new
chr3	98517075	98522955	chr3:98517075-98522955	0	-	98517075	98521424	789624	5	114,111,305,44,107,	0,1809,4057,4577,5773,
#Partially deleted in new
chr3	98517111	98522902	chr3:98517111-98522902	0	-	98517111	98521358	789624	5	78,111,245,51,54,	0,1773,4021,4541,5737,
#Partially deleted in new
chr3	98517138	98522875	chr3:98517138-98522875	0	-	98518985	98521424	789624	5	51,130,310,51,27,	0,1746,3994,4514,5710,
#Partially deleted in new
chr3	98517157	98522846	chr3:98517157-98522846	0	-	98517157	98521424	789624	5	32,111,310,44,59,	0,1727,3975,4495,5630,
#Deleted in new
chr3	98518734	98522875	chr3:98518734-98522875	0	-	98518734	98518734	8553170	3	261,310,27,	0,2398,4114,
#Deleted in new
chr3	98520718	98522902	chr3:98520718-98522902	0	-	98520718	98520718	8553170	2	724,54,	0,2130,
#Partially deleted in new
chr3	98521132	98585498	chr3:98521132-98585498	3	-	98562393	98585498	789624	4	310,119,105,58,	0,41191,60274,64308,
#Deleted in new
chr3	98521155	98522602	chr3:98521155-98522602	0	-	98521155	98521424	789624	3	287,66,61,	0,497,1386,
#Partially deleted in new
chr3	98522569	98525334	chr3:98522569-98525334	3	+	98522569	98522569	8553170	2	264,124,	0,2641,
#Deleted in new
chr3	98525060	98525274	chr3:98525060-98525274	7	-	98525060	98525060	16724991	1	214,	0,
#Deleted in new
chr3	98531898	98533150	chr3:98531898-98533150	3	+	98532033	98533116	789624	1	1252,	0,
#Partially deleted in new
chr3	98579445	98593723	chr3:98579445-98593723	3	-	98580682	98593504	0	7	1325,105,219,142,111,144,775,	0,1961,5995,9267,11186,11566,13503,
#Partially deleted in new
chr3	98579449	98593611	chr3:98579449-98593611	1	-	98580682	98593504	789624	7	1321,105,219,142,111,144,663,	0,1957,5991,9263,11182,11562,13499,
#Partially deleted in new
chr3	98581407	98585862	chr3:98581407-98585862	0	-	98581407	98581407	8553170	2	104,422,	0,4033,
#Partially deleted in new
chr3	98589661	98593648	chr3:98589661-98593648	0	-	98591044	98593504	789624	4	95,26,54,651,	0,970,1350,3336,
#Deleted in new
chr3	98590518	98593610	chr3:98590518-98593610	0	-	98590518	98590518	8553170	3	224,144,662,	0,493,2430,
#Deleted in new
chr3	98620064	98620618	chr3:98620064-98620618	7	+	98620064	98620064	16724991	1	554,	0,
#Deleted in new
chr3	98657801	98660570	chr3:98657801-98660570	7	+	98657801	98657801	16724991	1	2769,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	98714329	98732648	chr3:98714329-98732648	3	-	98714329	98714329	789624	5	169,146,128,103,223,	0,1046,1320,4089,18096,
#Partially deleted in new
chr3	98714331	98732508	chr3:98714331-98732508	0	-	98714331	98714331	8553170	4	167,146,128,83,	0,1044,1318,18094,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	98715304	98732651	chr3:98715304-98732651	0	-	98715304	98715304	8553170	4	217,128,98,226,	0,345,3119,17121,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	98732235	98795845	chr3:98732235-98795845	1	+	98772903	98793761	789624	10	297,100,78,70,104,64,187,138,153,2171,	0,36194,38643,38885,40577,41684,55800,56090,59605,61439,
#Partially deleted in new
chr3	98732235	98772969	chr3:98732235-98772969	0	+	98732235	98732235	8553170	5	297,172,100,78,157,	0,24133,36194,38643,40577,
#Partially deleted in new
chr3	98732254	98794362	chr3:98732254-98794362	1	+	98768440	98793761	789624	10	278,100,78,104,64,96,187,138,153,688,	0,36175,38624,40558,41665,52690,55781,56071,59586,61420,
#Partially deleted in new
chr3	98732264	98784976	chr3:98732264-98784976	0	+	98768440	98784976	789624	5	268,100,78,104,32,	0,36165,38614,40548,52680,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	98732265	98795254	chr3:98732265-98795254	0	+	98768440	98772848	789624	11	267,100,78,70,104,64,96,187,138,153,1580,	0,36164,38613,38855,40547,41654,52679,55770,56060,59575,61409,
#Partially deleted in new
chr3	98732368	98782917	chr3:98732368-98782917	0	+	98732368	98732368	8553170	6	164,78,70,104,64,60,	0,38510,38752,40444,41551,50489,
#Partially deleted in new
chr3	98732378	98793944	chr3:98732378-98793944	0	+	98732378	98732378	8553170	7	154,104,96,187,138,153,270,	0,40434,52566,55657,55947,59462,61296,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	98732449	98795845	chr3:98732449-98795845	0	+	98768440	98772848	789624	10	83,100,78,70,104,64,187,138,153,2171,	0,35980,38429,38671,40363,41470,55586,55876,59391,61225,
#Partially deleted in new
chr3	98732474	98788195	chr3:98732474-98788195	0	+	98768440	98788195	789624	6	58,100,78,104,64,160,	0,35955,38404,40338,41445,55561,
#Partially deleted in new
chr3	98732690	98788402	chr3:98732690-98788402	0	+	98768440	98788402	789624	8	53,91,78,104,64,96,187,77,	0,35748,38188,40122,41229,52254,55345,55635,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	98732703	98795845	chr3:98732703-98795845	3	+	98768440	98793761	789624	11	308,172,100,78,104,64,96,187,138,153,2171,	0,23665,35726,38175,40109,41216,52241,55332,55622,59137,60971,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	98732703	98795845	chr3:98732703-98795845	1	+	98732863	98793761	789624	10	308,100,78,104,64,96,187,138,153,2171,	0,35726,38175,40109,41216,52241,55332,55622,59137,60971,
#Partially deleted in new
chr3	98732713	98770940	chr3:98732713-98770940	0	+	98732713	98732713	8553170	2	298,62,	0,38165,
#Partially deleted in new
chr3	98732713	98794393	chr3:98732713-98794393	0	+	98732863	98756418	789624	11	298,172,100,78,104,64,96,187,138,153,719,	0,23655,35716,38165,40099,41206,52231,55322,55612,59127,60961,
#Partially deleted in new
chr3	98733455	98756546	chr3:98733455-98756546	0	+	98733455	98733455	8553170	2	136,178,	0,22913,
#Partially deleted in new
chr3	98763308	98782500	chr3:98763308-98782500	0	+	98768440	98772848	789624	7	123,100,78,70,104,64,294,	0,5121,7570,7812,9504,10611,18898,
#Partially deleted in new
chr3	98763316	98782460	chr3:98763316-98782460	1	+	98768440	98782312	789624	6	115,100,78,104,64,254,	0,5113,7562,9496,10603,18890,
#Partially deleted in new
chr3	98763320	98773105	chr3:98763320-98773105	0	+	98763320	98763320	8553170	4	111,100,78,293,	0,5109,7558,9492,
#Partially deleted in new
chr3	98763339	98788459	chr3:98763339-98788459	0	+	98768440	98788459	789624	7	100,100,78,104,64,187,134,	0,5090,7539,9473,10580,24696,24986,
#Partially deleted in new
chr3	98763347	98783739	chr3:98763347-98783739	0	+	98768440	98772848	789624	7	92,100,78,70,104,64,177,	0,5082,7531,7773,9465,10572,20215,
#Partially deleted in new
chr3	98763352	98788426	chr3:98763352-98788426	0	+	98763373	98788426	789624	8	79,100,78,104,64,96,187,101,	0,5077,7526,9460,10567,21592,24683,24973,
#Partially deleted in new
chr3	98770388	98788072	chr3:98770388-98788072	0	+	98770894	98788072	789624	6	110,78,104,64,96,37,	0,490,2424,3531,14556,17647,
#Partially deleted in new
chr3	98771054	98788438	chr3:98771054-98788438	0	+	98772903	98788438	789624	6	136,104,64,96,187,113,	0,1758,2865,13890,16981,17271,
#Partially deleted in new
chr3	98772241	98793765	chr3:98772241-98793765	0	+	98772241	98772241	8553170	5	190,104,76,64,91,	0,571,1179,1678,21433,
#Deleted in new
chr3	98782187	98783193	chr3:98782187-98783193	7	+	98782187	98782187	16724991	1	1006,	0,
#Partially deleted in new
chr3	98783510	98791993	chr3:98783510-98791993	0	+	98783510	98783510	8553170	5	229,96,187,138,153,	0,1434,4525,4815,8330,
#Partially deleted in new
chr3	98784429	98791997	chr3:98784429-98791997	0	+	98784429	98784429	8553170	5	119,96,187,138,157,	0,515,3606,3896,7411,
#Partially deleted in new
chr3	98791858	98820997	chr3:98791858-98820997	0	+	98791858	98791858	8553170	4	135,118,196,210,	0,1816,9563,28929,
#Partially deleted in new
chr3	98795940	98901689	chr3:98795940-98901689	3	-	98799371	98901326	789624	16	3901,138,50,94,126,87,151,125,216,41,134,73,52,138,228,568,	0,4638,5659,12140,15253,15527,16391,21828,23261,24307,26287,26728,29374,53520,85599,105181,
#Partially deleted in new
chr3	98797782	98901326	chr3:98797782-98901326	1	-	98799371	98901326	789624	16	2059,180,50,94,126,87,151,125,216,41,134,73,52,138,228,205,	0,2796,3817,10298,13411,13685,14549,19986,21419,22465,24445,24886,27532,51678,83757,103339,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	98799835	98801971	chr3:98799835-98801971	0	-	98799835	98799835	8553170	3	6,138,372,	0,743,1764,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	98801304	98821201	chr3:98801304-98821201	0	+	98801304	98801304	8553170	3	151,69,414,	0,244,19483,
#Partially deleted in new
chr3	98801382	98812484	chr3:98801382-98812484	0	-	98801382	98801382	8553170	5	267,94,126,87,153,	0,6698,9811,10085,10949,
#Partially deleted in new
chr3	98807906	98817828	chr3:98807906-98817828	0	-	98807906	98807906	8553170	5	268,126,87,151,60,	0,3287,3561,4425,9862,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	98807910	98816289	chr3:98807910-98816289	0	-	98807910	98807910	8553170	4	264,126,87,3958,	0,3283,3557,4421,
#Partially deleted in new
chr3	98812330	98819342	chr3:98812330-98819342	0	-	98812330	98812330	8553170	3	152,125,141,	0,5438,6871,
#Partially deleted in new
chr3	98822308	98900989	chr3:98822308-98900989	0	-	98822308	98822308	8553170	5	53,73,52,138,268,	0,360,3006,27152,78413,
#Partially deleted in new
chr3	98825333	98895412	chr3:98825333-98895412	0	-	98825333	98825333	8553170	4	33,138,228,183,	0,24127,56206,69896,
#Partially deleted in new
chr3	98849387	98901171	chr3:98849387-98901171	0	-	98849387	98881654	789624	4	211,228,65,50,	0,32152,41004,51734,
#Partially deleted in new
chr3	98902423	99018562	chr3:98902423-99018562	3	+	98902423	98902423	8553170	4	94,102,67,132,	0,2469,115632,116007,
#Deleted in new
chr3	98981057	98983096	chr3:98981057-98983096	3	+	98981057	98981057	8553170	2	329,633,	0,1406,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	98987386	98987449	chr3:98987386-98987449	3	+	98987386	98987386	8553170	1	63,	0,
#Deleted in new
chr3	99215223	99216266	chr3:99215223-99216266	7	-	99215223	99215223	16724991	1	1043,	0,
#Partially deleted in new
chr3	99326376	99326552	chr3:99326376-99326552	7	-	99326376	99326376	16724991	1	176,	0,
#Partially deleted in new
chr3	99500346	99505508	chr3:99500346-99505508	3	+	99500346	99500346	8553170	2	195,263,	0,4899,
#Partially deleted in new
chr3	99507186	99527113	chr3:99507186-99527113	3	-	99507186	99507186	8553170	2	400,65,	0,19862,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	99598063	99623820	chr3:99598063-99623820	3	+	99598063	99598063	8553170	2	436,1869,	0,23888,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	99638474	99799226	chr3:99638474-99799226	3	+	99790682	99796136	789624	5	190,62,125,331,4997,	0,37185,106422,152205,155755,
#Partially deleted in new
chr3	99638474	99794242	chr3:99638474-99794242	0	+	99790682	99794242	789624	4	190,125,331,13,	0,106422,152205,155755,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	99638474	99680462	chr3:99638474-99680462	0	+	99638474	99638474	8553170	3	190,62,2712,	0,37185,39276,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	99638474	99703618	chr3:99638474-99703618	0	+	99638474	99638474	8553170	5	190,62,107,170,312,	0,37185,46958,52924,64832,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	99638474	99691871	chr3:99638474-99691871	0	+	99638474	99638474	8553170	4	190,62,107,473,	0,37185,46958,52924,
#Partially deleted in new
chr3	99638595	99796733	chr3:99638595-99796733	1	+	99790682	99796136	789624	4	69,125,331,2504,	0,106301,152084,155634,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	99638621	99794508	chr3:99638621-99794508	0	+	99790682	99794508	789624	5	43,170,125,331,279,	0,52777,106275,152058,155608,
#Partially deleted in new
chr3	99707070	99744987	chr3:99707070-99744987	0	+	99707070	99707070	8553170	2	99,91,	0,37826,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	99802698	99806058	chr3:99802698-99806058	3	-	99802698	99802698	8553170	1	3360,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	99817833	100181732	chr3:99817833-100181732	3	+	99817979	100178388	789624	10	210,89,72,130,60,103,61,88,89,3428,	0,329139,342596,344469,348501,349904,354005,354482,358493,360471,
#Partially deleted in new
chr3	99817836	100160455	chr3:99817836-100160455	0	+	100147010	100160455	789624	4	207,75,89,26,	0,233395,329136,342593,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	99817882	100172404	chr3:99817882-100172404	0	+	99817979	100141582	789624	9	161,116,89,72,130,60,103,61,89,	0,323647,329090,342547,344420,348452,349855,353956,354433,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	99817911	100041396	chr3:99817911-100041396	0	+	99817911	99817911	8553170	5	132,56,204,131,1622,	0,193791,205407,207516,221863,
#Partially deleted in new
chr3	99830140	99876173	chr3:99830140-99876173	0	-	99830140	99830140	8553170	2	465,102,	0,45931,
#Partially deleted in new
chr3	99830478	99848612	chr3:99830478-99848612	0	-	99830478	99848612	789624	2	127,318,	0,17816,
#Partially deleted in new
chr3	99833143	100114513	chr3:99833143-100114513	3	-	99833234	99931020	789624	6	118,2776,179,174,262,461,	0,15151,91086,96712,97625,280909,
#Partially deleted in new
chr3	99833216	99876104	chr3:99833216-99876104	1	-	99833234	99850955	789624	3	45,2776,33,	0,15078,42855,
#Partially deleted in new
chr3	99833216	99851075	chr3:99833216-99851075	1	-	99833234	99850403	789624	3	45,2133,143,	0,15078,17716,
#Partially deleted in new
chr3	99847922	99876203	chr3:99847922-99876203	1	-	99848273	99850955	789624	2	3148,132,	0,28149,
#Partially deleted in new
chr3	99847927	100114513	chr3:99847927-100114513	1	-	99848273	99931020	789624	5	3143,179,174,262,461,	0,76302,81928,82841,266125,
#Partially deleted in new
chr3	99848444	99876144	chr3:99848444-99876144	0	-	99848444	99850955	789624	3	2626,199,73,	0,25843,27627,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	99898126	100114513	chr3:99898126-100114513	1	-	99898599	99931020	789624	5	636,179,174,262,461,	0,26103,31729,32642,215926,
#Deleted in new
chr3	99964313	99964398	chr3:99964313-99964398	3	-	99964313	99964313	5263520	1	85,	0,
#Partially deleted in new
chr3	100075570	100114264	chr3:100075570-100114264	0	-	100075570	100075570	8553170	3	62,62,212,	0,34397,38482,
#Partially deleted in new
chr3	100114929	100178599	chr3:100114929-100178599	1	+	100114988	100178388	789624	10	69,89,72,130,60,103,61,88,89,295,	0,32043,45500,47373,51405,52808,56909,57386,61397,63375,
#Partially deleted in new
chr3	100159817	100178355	chr3:100159817-100178355	0	+	100159895	100178355	789624	9	99,72,130,60,103,61,88,89,51,	0,612,2485,6517,7920,12021,12498,16509,18487,
#Partially deleted in new
chr3	100162352	100178599	chr3:100162352-100178599	0	+	100162352	100178308	789624	4	80,60,103,295,	0,3982,5385,15952,
#Partially deleted in new
chr3	100166332	100172327	chr3:100166332-100172327	0	+	100166332	100166332	8553170	3	62,103,489,	0,1405,5506,
#Partially deleted in new
chr3	100176237	100178603	chr3:100176237-100178603	0	+	100176237	100176237	8553170	2	178,299,	0,2067,
#Partially deleted in new
chr3	100185686	100211766	chr3:100185686-100211766	7	+	100185686	100185686	16724991	7	192,111,102,88,141,210,191,	0,4254,8291,9481,9999,22341,25889,
#Partially deleted in new
chr3	100185823	100190195	chr3:100185823-100190195	4	+	100185823	100185823	16724991	2	55,255,	0,4117,
#Partially deleted in new
chr3	100185823	100194191	chr3:100185823-100194191	4	+	100185823	100185823	16724991	3	55,111,214,	0,4117,8154,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	100221267	100223858	chr3:100221267-100223858	7	-	100221267	100221267	16724991	4	201,87,117,111,	0,830,2280,2480,
#Deleted in new
chr3	100225373	100226073	chr3:100225373-100226073	7	+	100225373	100225373	16724991	1	700,	0,
#Partially deleted in new
chr3	100260999	100290645	chr3:100260999-100290645	0	+	100261018	100290645	789624	5	72,112,130,205,68,	0,18649,20718,22607,29578,
#Partially deleted in new
chr3	100261000	100325251	chr3:100261000-100325251	3	+	100261018	100323668	789624	18	71,112,106,205,124,125,47,104,123,93,171,43,107,140,89,136,195,1665,	0,18648,20741,22606,29577,34086,34301,35171,36922,38238,41066,43845,45436,49402,55098,58068,59776,62586,
#Partially deleted in new
chr3	100261011	100325238	chr3:100261011-100325238	1	+	100261018	100323668	789624	19	60,112,106,205,124,125,47,104,123,93,171,43,107,140,45,89,136,195,1652,	0,18637,20730,22595,29566,34075,34290,35160,36911,38227,41055,43834,45425,49391,50821,55087,58057,59765,62575,
#Partially deleted in new
chr3	100261063	100325238	chr3:100261063-100325238	0	+	100261063	100261063	8553170	18	482,112,106,205,124,125,47,104,123,93,171,43,107,140,89,136,195,1652,	0,18585,20678,22543,29514,34023,34238,35108,36859,38175,41003,43782,45373,49339,55035,58005,59713,62523,
#Partially deleted in new
chr3	100267191	100290656	chr3:100267191-100290656	0	+	100267237	100290656	789624	5	57,112,106,205,79,	0,12457,14550,16415,23386,
#Partially deleted in new
chr3	100279439	100323691	chr3:100279439-100323691	1	+	100281782	100323668	789624	17	321,106,124,125,47,104,123,93,171,43,107,140,45,89,136,195,105,	0,2302,11138,15647,15862,16732,18483,19799,22627,25406,26997,30963,32393,36659,39629,41337,44147,
#Partially deleted in new
chr3	100279647	100284049	chr3:100279647-100284049	0	+	100279647	100279647	8553170	3	113,106,443,	0,2094,3959,
#Partially deleted in new
chr3	100301838	100310421	chr3:100301838-100310421	0	+	100301838	100301838	8553170	4	399,43,107,19,	0,3007,4598,8564,
#Partially deleted in new
chr3	100315862	100325234	chr3:100315862-100325234	0	+	100315862	100315862	8553170	4	325,136,195,1648,	0,3206,4914,7724,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	100334700	100361635	chr3:100334700-100361635	3	+	100334791	100355268	789624	10	98,119,121,89,94,75,79,99,56,6459,	0,4386,5114,6372,10884,11480,14102,17703,20071,20476,
#Partially deleted in new
chr3	100334738	100355351	chr3:100334738-100355351	0	+	100334738	100334738	8553170	9	60,119,121,89,671,79,99,56,175,	0,4348,5076,6334,10846,14064,17665,20033,20438,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	100334756	100350011	chr3:100334756-100350011	0	+	100334756	100334756	8553170	6	42,119,121,89,75,1209,	0,4330,5058,6316,11424,14046,
#Partially deleted in new
chr3	100334769	100348881	chr3:100334769-100348881	0	+	100334791	100341085	789624	7	29,119,140,89,94,75,79,	0,4317,5045,6303,10815,11411,14033,
#Partially deleted in new
chr3	100334775	100341143	chr3:100334775-100341143	0	+	100334791	100334926	789624	4	337,119,121,71,	0,4311,5039,6297,
#Partially deleted in new
chr3	100334810	100346265	chr3:100334810-100346265	0	+	100334810	100346265	789624	6	287,119,121,89,94,85,	0,4276,5004,6262,10774,11370,
#Partially deleted in new
chr3	100339093	100345823	chr3:100339093-100345823	0	+	100339093	100339093	8553170	4	112,140,89,239,	0,721,1979,6491,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	100363430	100401398	chr3:100363430-100401398	3	-	100365563	100400949	789624	12	2287,123,98,117,108,135,208,149,110,127,174,773,	0,4613,5607,9175,10107,11587,14274,18184,21048,22787,23374,37195,
#Deleted in new
chr3	100372005	100373725	chr3:100372005-100373725	0	-	100372005	100372005	8553170	2	717,188,	0,1532,
#Partially deleted in new
chr3	100377415	100381772	chr3:100377415-100381772	0	-	100377415	100377415	8553170	2	497,158,	0,4199,
#Partially deleted in new
chr3	100401192	100456319	chr3:100401192-100456319	3	+	100429729	100455926	789624	4	1247,189,231,543,	0,28504,50526,54584,
#Partially deleted in new
chr3	100401531	100456188	chr3:100401531-100456188	0	+	100429729	100451750	789624	4	908,189,214,412,	0,28165,50204,54245,
#Partially deleted in new
chr3	100401610	100456301	chr3:100401610-100456301	1	+	100429729	100455926	789624	4	829,189,270,525,	0,28086,50069,54166,
#Partially deleted in new
chr3	100492618	100577444	chr3:100492618-100577444	3	+	100555211	100577018	789624	6	310,193,213,185,146,520,	0,62590,64141,65786,76203,84306,
#Partially deleted in new
chr3	100492650	100577432	chr3:100492650-100577432	1	+	100519563	100577018	789624	8	278,240,147,193,213,185,146,508,	0,26426,26811,62558,64109,65754,76171,84274,
#Partially deleted in new
chr3	100492659	100558527	chr3:100492659-100558527	0	+	100519563	100558527	789624	5	269,76,193,213,123,	0,26873,62549,64100,65745,
#Partially deleted in new
chr3	100519238	100556972	chr3:100519238-100556972	0	+	100519238	100519238	8553170	4	78,76,193,213,	0,294,35970,37521,
#Partially deleted in new
chr3	100568821	100570914	chr3:100568821-100570914	0	+	100568821	100568821	8553170	2	146,306,	0,1787,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	100568923	100577444	chr3:100568923-100577444	0	+	100568923	100568923	8553170	3	44,4051,520,	0,1685,8001,
#Partially deleted in new
chr3	100571029	100577065	chr3:100571029-100577065	0	+	100571029	100571029	8553170	2	290,141,	0,5895,
#Partially deleted in new
chr3	100609588	100695479	chr3:100609588-100695479	3	+	100609856	100695001	789624	16	383,114,105,113,150,101,140,108,164,156,113,347,97,156,157,736,	0,20009,21116,23676,26088,27713,33677,33937,36356,36980,40106,45246,46310,50099,59360,85155,
#Partially deleted in new
chr3	100635537	100643608	chr3:100635537-100643608	0	+	100635537	100635537	8553170	4	289,101,140,83,	0,1764,7728,7988,
#Partially deleted in new
chr3	100635539	100637575	chr3:100635539-100637575	0	+	100635539	100635539	8553170	2	287,274,	0,1762,
#Partially deleted in new
chr3	100635597	100695258	chr3:100635597-100695258	1	+	100637341	100695001	789624	10	229,101,164,156,113,347,97,156,157,515,	0,1704,10347,10971,14097,19237,20301,24090,33351,59146,
#Partially deleted in new
chr3	100646120	100646197	chr3:100646120-100646197	3	+	100646120	100646120	8553170	1	77,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	100654195	100695338	chr3:100654195-100695338	0	+	100654195	100654195	8553170	5	986,97,156,157,595,	0,1703,5492,14753,40548,
#Partially deleted in new
chr3	100665049	100665476	chr3:100665049-100665476	7	-	100665049	100665049	16724991	1	427,	0,
#Partially deleted in new
chr3	100709330	100747448	chr3:100709330-100747448	1	+	100713685	100747448	789624	8	391,227,84,147,165,141,99,35,	0,4312,10644,19381,23177,27245,35502,38083,
#Partially deleted in new
chr3	100709360	100748942	chr3:100709360-100748942	1	+	100713685	100748531	789624	8	71,227,84,147,165,129,99,794,	0,4282,10614,19351,23147,27215,35472,38788,
#Partially deleted in new
chr3	100709377	100748927	chr3:100709377-100748927	3	+	100713685	100748531	789624	8	54,227,84,147,165,141,99,779,	0,4265,10597,19334,23130,27198,35455,38771,
#Partially deleted in new
chr3	100709424	100748966	chr3:100709424-100748966	1	+	100713685	100748531	789624	8	297,227,84,147,165,141,99,818,	0,4218,10550,19287,23083,27151,35408,38724,
#Partially deleted in new
chr3	100709471	100728828	chr3:100709471-100728828	0	+	100713685	100728828	789624	5	250,98,227,84,117,	0,1499,4171,10503,19240,
#Partially deleted in new
chr3	100709605	100748964	chr3:100709605-100748964	1	+	100713685	100748531	789624	8	116,227,84,147,165,129,99,816,	0,4037,10369,19106,22902,26970,35227,38543,
#Partially deleted in new
chr3	100709612	100732563	chr3:100709612-100732563	0	+	100713685	100732563	789624	5	209,227,84,147,56,	0,4030,10362,19099,22895,
#Partially deleted in new
chr3	100709969	100732636	chr3:100709969-100732636	0	+	100713685	100732636	789624	5	326,227,84,147,129,	0,3673,10005,18742,22538,
#Partially deleted in new
chr3	100713685	100748531	chr3:100713685-100748531	1	+	100713685	100747448	789624	8	184,84,147,165,141,99,41,383,	0,6289,15026,18822,22890,31147,33728,34463,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	100742475	100748963	chr3:100742475-100748963	0	+	100742475	100742475	8553170	2	2456,815,	0,5673,
#Partially deleted in new
chr3	100749155	100993515	chr3:100749155-100993515	1	-	100750494	100993405	789624	67	1455,123,162,30,80,109,210,69,129,93,78,75,63,78,81,60,75,75,66,48,72,57,75,60,81,60,57,84,60,84,57,84,60,60,84,57,87,33,90,60,48,75,63,48,93,39,42,75,72,75,75,75,66,75,72,75,75,78,93,72,49,53,182,133,69,180,210,	0,2396,3631,4663,5456,16685,21587,25449,26051,29128,30976,38572,40298,43535,45767,47253,55636,59005,61256,62074,62572,63311,64505,66756,67532,68280,69369,71064,71898,73433,74302,75702,76629,79237,80425,81422,83108,83969,85528,86445,87968,89054,89246,90413,90916,91664,92842,97216,98446,99645,100889,101504,102719,113155,113682,114846,115677,117723,125685,126352,127356,136380,136986,149606,153462,177146,244150,
#Partially deleted in new
chr3	100749334	100993515	chr3:100749334-100993515	3	-	100750494	100993405	789624	35	1276,123,162,30,80,109,210,69,129,93,78,63,78,81,60,75,75,75,72,75,75,75,66,75,75,78,93,72,49,53,182,133,69,180,210,	0,2217,3452,4484,5277,16506,21408,25270,25872,28949,30797,40119,43356,45588,47074,55457,58826,97037,98267,99466,100710,101325,102540,112976,115498,117544,125506,126173,127177,136201,136807,149427,153283,176967,243971,
#Partially deleted in new
chr3	100749334	100846549	chr3:100749334-100846549	0	-	100749334	100749334	8553170	18	1276,123,162,30,80,109,210,69,129,93,78,75,63,78,81,75,75,178,	0,2217,3452,4484,5277,16506,21408,25270,25872,28949,30797,38393,40119,43356,45588,55457,58826,97037,
#Partially deleted in new
chr3	100750239	100846428	chr3:100750239-100846428	0	-	100750494	100846428	789624	45	371,123,162,30,80,109,210,69,129,93,78,63,78,81,60,75,75,66,48,72,57,75,60,81,60,57,84,60,84,57,84,60,60,57,87,33,90,60,48,75,63,48,39,42,57,	0,1312,2547,3579,4372,15601,20503,24365,24967,28044,29892,39214,42451,44683,46169,54552,57921,60172,60990,61488,62227,63421,65672,66448,67196,68285,69980,70814,72349,73218,74618,75545,78153,80338,82024,82885,84444,85361,86884,87970,88162,89329,90580,91758,96132,
#Partially deleted in new
chr3	100750455	100837193	chr3:100750455-100837193	0	-	100750455	100750455	8553170	28	155,123,162,30,80,109,210,69,129,93,78,75,63,78,81,60,75,75,84,57,84,60,84,87,33,90,60,70,	0,1096,2331,3363,4156,15385,20287,24149,24751,27828,29676,37272,38998,42235,44467,45953,54336,57705,72133,73002,74402,75329,79125,81808,82669,84228,85145,86668,
#Partially deleted in new
chr3	100752506	100765906	chr3:100752506-100765906	0	-	100752506	100752506	8553170	4	442,30,80,66,	0,1312,2105,13334,
#Partially deleted in new
chr3	100770886	100804852	chr3:100770886-100804852	0	-	100770886	100804852	789624	9	66,69,129,93,78,63,81,60,61,	0,3718,4320,7397,9245,18567,24036,25522,33905,
#Partially deleted in new
chr3	100774603	100778627	chr3:100774603-100778627	0	-	100774603	100774603	8553170	3	70,129,344,	0,603,3680,
#Partially deleted in new
chr3	100775290	100804844	chr3:100775290-100804844	0	-	100775290	100804844	789624	8	45,93,78,75,63,78,81,53,	0,2993,4841,12437,14163,17400,19632,29501,
#Partially deleted in new
chr3	100780130	100832314	chr3:100780130-100832314	0	-	100780130	100832314	789624	13	79,75,63,78,81,60,75,75,60,84,57,84,51,	0,7597,9323,12560,14792,16278,24661,28030,40923,42458,43327,44727,52133,
#Partially deleted in new
chr3	100794922	100846430	chr3:100794922-100846430	0	-	100794922	100846430	789624	8	81,60,75,75,87,33,90,59,	0,1486,9869,13238,37341,38202,39761,51449,
#Partially deleted in new
chr3	100794922	100832305	chr3:100794922-100832305	0	-	100794922	100832305	789624	8	81,75,75,84,60,60,84,42,	0,9869,13238,29935,30862,33470,34658,37341,
#Partially deleted in new
chr3	100794922	100812524	chr3:100794922-100812524	0	-	100794922	100812524	789624	7	81,75,75,66,48,72,58,	0,9869,13238,15489,16307,16805,17544,
#Partially deleted in new
chr3	100794922	100811277	chr3:100794922-100811277	0	-	100794922	100811277	789624	7	81,48,60,75,75,66,48,	0,881,1486,9869,13238,15489,16307,
#Partially deleted in new
chr3	100808192	100840162	chr3:100808192-100840162	0	-	100808192	100840162	789624	9	43,87,33,90,60,48,63,48,91,	0,24071,24932,26491,27408,28931,30209,31376,31879,
#Partially deleted in new
chr3	100813660	100866956	chr3:100813660-100866956	0	-	100813660	100866956	789624	5	75,75,72,75,78,	0,48650,49177,51172,53218,
#Partially deleted in new
chr3	100816010	100993453	chr3:100816010-100993453	1	-	100816658	100993405	789624	39	758,60,57,84,60,84,57,84,87,33,90,60,48,75,63,48,93,39,42,75,72,75,75,75,66,75,72,75,75,78,93,72,49,53,182,133,69,180,148,	0,1425,2514,4209,5043,6578,7447,8847,16253,17114,18673,19590,21113,22199,22391,23558,24061,24809,25987,30361,31591,32790,34034,34649,35864,46300,46827,47991,48822,50868,58830,59497,60501,69525,70131,82751,86607,110291,177295,
#Partially deleted in new
chr3	100828392	100847673	chr3:100828392-100847673	0	-	100828392	100847673	789624	8	60,84,87,33,90,60,75,72,	0,1188,3871,4732,6291,7208,17979,19209,
#Partially deleted in new
chr3	100830577	100837323	chr3:100830577-100837323	0	-	100830577	100830577	8553170	6	57,87,33,90,60,200,	0,1686,2547,4106,5023,6546,
#Partially deleted in new
chr3	100832263	100840858	chr3:100832263-100840858	0	-	100832263	100840858	789624	7	87,33,90,60,48,93,39,	0,861,2420,3337,7305,7808,8556,
#Partially deleted in new
chr3	100837123	100842030	chr3:100837123-100842030	0	-	100837123	100842030	789624	5	48,48,93,39,33,	0,2445,2948,3696,4874,
#Partially deleted in new
chr3	100838406	100866920	chr3:100838406-100866920	0	-	100838406	100866920	789624	14	58,48,93,39,42,75,72,75,75,75,66,75,75,42,	0,1162,1665,2413,3591,7965,9195,10394,11638,12253,13468,23904,26426,28472,
#Partially deleted in new
chr3	100850044	100862863	chr3:100850044-100862863	0	-	100850044	100862863	789624	4	75,75,75,26,	0,615,12266,12793,
#Partially deleted in new
chr3	100862310	100885578	chr3:100862310-100885578	0	-	100862310	100885578	789624	8	75,75,75,78,93,72,49,43,	0,1691,2522,4568,12530,13197,14201,23225,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	100862417	100993450	chr3:100862417-100993450	0	-	100862417	100862417	8553170	11	2490,78,93,72,49,53,182,133,69,180,145,	0,4461,12423,13090,14094,23118,23724,36344,40200,63884,130888,
#Partially deleted in new
chr3	100875529	100914464	chr3:100875529-100914464	0	-	100875529	100914464	789624	7	50,49,53,182,133,69,37,	0,982,10006,10612,23232,27088,38898,
#Partially deleted in new
chr3	100886141	100993492	chr3:100886141-100993492	0	-	100886141	100993405	789624	4	182,133,69,187,	0,12620,16476,107164,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	100898803	100993421	chr3:100898803-100993421	0	-	100945593	100993405	789624	5	91,69,180,97,116,	0,3814,27498,46776,94502,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	100898836	100930994	chr3:100898836-100930994	0	-	100898836	100898836	8553170	4	58,69,180,279,	0,3781,27465,31879,
#Deleted in new
chr3	100910974	100912175	chr3:100910974-100912175	7	-	100910974	100910974	16724991	1	1201,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	100952626	100952733	chr3:100952626-100952733	3	+	100952626	100952626	8553170	1	107,	0,
#Deleted in new
chr3	101163093	101163986	chr3:101163093-101163986	7	+	101163093	101163093	16724991	1	893,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr3	101222545	101320560	chr3:101222545-101320560	3	-	101226968	101320372	789624	19	4436,80,211,189,211,220,1259,304,86,245,21,59,162,83,50,32,167,249,273,	0,6251,6834,8411,10235,20142,20983,23256,31150,34983,44965,46969,51035,53117,54118,68933,81600,97038,97742,
#Partially deleted in new
chr3	101324204	101513184	chr3:101324204-101513184	3	-	101325942	101513130	0	24	1876,151,69,44,53,125,93,123,117,134,269,180,34,147,158,340,182,119,195,198,98,96,50,94,	0,3461,4273,4441,6129,7780,8565,13304,15890,17441,19481,23667,27413,37510,40629,42225,43625,47803,74656,93388,134750,169668,176865,188886,
#Partially deleted in new
chr3	101324272	101513241	chr3:101324272-101513241	1	-	101325942	101513130	0	23	1808,151,69,44,53,125,93,123,117,134,269,180,34,147,158,340,182,119,195,98,96,50,151,	0,3393,4205,4373,6061,7712,8497,13236,15822,17373,19413,23599,27345,37442,40561,42157,43557,47735,74588,134682,169600,176797,188818,
#Partially deleted in new
chr3	101324272	101513184	chr3:101324272-101513184	1	-	101325942	101493959	0	21	1808,151,69,44,53,125,93,123,117,134,269,180,34,147,158,340,182,119,98,96,94,	0,3393,4205,4373,6061,7712,8497,13236,15822,17373,19413,23599,27345,37442,40561,42157,43557,47735,134682,169600,188818,
#Partially deleted in new
chr3	101324272	101513205	chr3:101324272-101513205	1	-	101325942	101513130	789624	23	1808,151,69,44,53,125,93,123,117,134,269,180,34,147,158,340,182,119,198,98,96,50,115,	0,3393,4205,4373,6061,7712,8497,13236,15822,17373,19413,23599,27345,37442,40561,42157,43557,47735,93320,134682,169600,176797,188818,
#Partially deleted in new
chr3	101325539	101333269	chr3:101325539-101333269	1	-	101325942	101332906	0	7	541,151,69,44,53,125,500,	0,2126,2938,3106,4794,6445,7230,
#Partially deleted in new
chr3	101325866	101513223	chr3:101325866-101513223	1	-	101325942	101493959	0	23	214,151,69,44,53,125,93,123,117,134,269,180,34,147,158,340,182,119,195,198,98,96,133,	0,1799,2611,2779,4467,6118,6903,11642,14228,15779,17819,22005,25751,35848,38967,40563,41963,46141,72994,91726,133088,168006,187224,
#Partially deleted in new
chr3	101337128	101340425	chr3:101337128-101340425	0	-	101337128	101337128	8553170	2	503,331,	0,2966,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	101347325	101347913	chr3:101347325-101347913	0	-	101347608	101347913	789624	2	393,42,	0,546,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	101357291	101359242	chr3:101357291-101359242	7	+	101357291	101357291	16724991	1	1951,	0,
#Deleted in new
chr3	101414227	101414633	chr3:101414227-101414633	7	+	101414227	101414227	16724991	1	406,	0,
#Deleted in new
chr3	101457240	101457732	chr3:101457240-101457732	7	-	101457240	101457240	16724991	1	492,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	101458529	101458626	chr3:101458529-101458626	3	+	101458529	101458529	8553170	1	97,	0,
#Deleted in new
chr3	101521890	101522979	chr3:101521890-101522979	7	+	101521890	101521890	16724991	1	1089,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	101561861	101566446	chr3:101561861-101566446	3	+	101564781	101565993	0	2	142,1677,	0,2908,
#Partially deleted in new
chr3	101562040	101565717	chr3:101562040-101565717	0	+	101564781	101565717	789624	2	69,948,	0,2729,
#Partially deleted in new
chr3	101574094	101594437	chr3:101574094-101594437	3	+	101574215	101592753	789624	5	185,215,75,56,1811,	0,5695,11342,16120,18532,
#Partially deleted in new
chr3	101574185	101592771	chr3:101574185-101592771	0	+	101574215	101579647	789624	5	94,416,75,56,145,	0,5403,11251,16029,18441,
#Partially deleted in new
chr3	101574189	101594407	chr3:101574189-101594407	0	+	101574215	101579951	789624	5	90,163,75,56,1781,	0,5652,11247,16025,18437,
#Partially deleted in new
chr3	101574193	101594437	chr3:101574193-101594437	1	+	101590229	101592753	789624	4	86,75,56,1811,	0,11243,16021,18433,
#Partially deleted in new
chr3	101574202	101579647	chr3:101574202-101579647	1	+	101574215	101579647	789624	2	77,59,	0,5386,
#Partially deleted in new
chr3	101574218	101593251	chr3:101574218-101593251	0	+	101574218	101574218	8553170	3	61,56,625,	0,15996,18408,
#Partially deleted in new
chr3	101574840	101592776	chr3:101574840-101592776	0	+	101574840	101574840	8553170	5	93,215,75,56,150,	0,4949,10596,15374,17786,
#Partially deleted in new
chr3	101576488	101576947	chr3:101576488-101576947	7	-	101576488	101576488	16724991	1	459,	0,
#Partially deleted in new
chr3	101589748	101592875	chr3:101589748-101592875	0	+	101589748	101589748	8553170	2	522,249,	0,2878,
#Deleted in new
chr3	101599242	101599644	chr3:101599242-101599644	7	-	101599242	101599242	16724991	1	402,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	101615825	101615928	chr3:101615825-101615928	3	+	101615825	101615825	8553170	1	103,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	101628309	101628406	chr3:101628309-101628406	3	-	101628309	101628309	8553170	1	97,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	101647420	101647522	chr3:101647420-101647522	3	+	101647420	101647420	8553170	1	102,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	101648888	101677495	chr3:101648888-101677495	3	-	101651165	101676914	789624	11	2795,176,159,118,145,246,177,845,232,236,891,	0,3607,3891,5815,7215,10894,15649,16075,22241,23089,27716,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	101655840	101659923	chr3:101655840-101659923	0	-	101655840	101655840	8553170	2	408,141,	0,3942,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	101662059	101662164	chr3:101662059-101662164	3	-	101662059	101662059	8553170	1	105,	0,
#Partially deleted in new
chr3	101670612	101677118	chr3:101670612-101677118	1	-	101671875	101676914	789624	2	1601,514,	0,5992,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	101676474	101679217	chr3:101676474-101679217	3	+	101676474	101676474	789624	1	2743,	0,
#Partially deleted in new
chr3	101681090	101686712	chr3:101681090-101686712	0	-	101681090	101681090	8553170	5	125,64,137,111,231,	0,1338,1680,4727,5391,
#Partially deleted in new
chr3	101681091	101686782	chr3:101681091-101686782	3	-	101681134	101686676	0	6	124,64,137,111,76,111,	0,1337,1679,4726,5390,5580,
#Partially deleted in new
chr3	101681095	101686705	chr3:101681095-101686705	1	-	101681178	101686676	789624	5	120,137,111,76,34,	0,1675,4722,5386,5576,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	101681122	101685889	chr3:101681122-101685889	0	-	101681122	101681122	8553170	2	1785,72,	0,4695,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	101682041	101686695	chr3:101682041-101686695	1	-	101682368	101686676	789624	5	451,137,111,76,24,	0,729,3776,4440,4630,
#Deleted in new
chr3	101686028	101686714	chr3:101686028-101686714	0	-	101686028	101686028	8553170	2	529,43,	0,643,
#Deleted in new
chr3	101712471	101713191	chr3:101712471-101713191	7	+	101712471	101712471	16724991	1	720,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	101723924	101770562	chr3:101723924-101770562	3	+	101724676	101765551	789624	11	795,143,159,102,114,167,165,134,790,76,5716,	0,2669,3458,4911,7915,8563,31505,33138,33709,38560,40922,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	101724592	101759512	chr3:101724592-101759512	0	+	101724592	101724592	8553170	8	127,143,159,114,167,165,134,1879,	0,2001,2790,7247,7895,30837,32470,33041,
#Partially deleted in new
chr3	101724654	101765978	chr3:101724654-101765978	1	+	101724676	101765551	789624	11	65,143,159,102,114,167,165,134,613,76,1132,	0,1939,2728,4181,7185,7833,30775,32408,33156,37830,40192,
#Partially deleted in new
chr3	101724657	101732654	chr3:101724657-101732654	0	+	101724676	101728855	789624	6	62,143,159,124,114,167,	0,1936,2725,4156,7182,7830,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	101727469	101765042	chr3:101727469-101765042	0	+	101727469	101757082	789624	9	72,114,167,165,124,790,76,78,196,	0,4370,5018,27960,29603,30164,35015,35639,37377,
#Partially deleted in new
chr3	101732610	101755478	chr3:101732610-101755478	0	+	101732610	101732610	8553170	2	44,49,	0,22819,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	101779229	101823623	chr3:101779229-101823623	1	+	101785596	101821954	789624	8	95,181,121,288,755,74,207,2220,	0,2880,3430,6172,22005,27823,37565,42174,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	101779441	101827392	chr3:101779441-101827392	3	+	101785596	101821954	789624	8	459,181,121,288,755,74,207,5989,	0,2668,3218,5960,21793,27611,37353,41962,
#Deleted in new
chr3	101779494	101782289	chr3:101779494-101782289	0	+	101779494	101779494	8553170	2	440,180,	0,2615,
#Partially deleted in new
chr3	101801859	101822825	chr3:101801859-101822825	1	+	101807068	101821409	789624	5	130,74,110,96,1422,	0,5193,14935,15046,19544,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	101823792	101824998	chr3:101823792-101824998	3	-	101823792	101823792	8553170	2	53,307,	0,899,
#Partially deleted in new
chr3	101827990	101852126	chr3:101827990-101852126	0	+	101849628	101852126	789624	4	194,76,1026,42,	0,1622,20901,24094,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr3	101827992	101861022	chr3:101827992-101861022	1	+	101852095	101859371	789624	13	192,76,140,31,104,773,106,147,64,170,111,168,1705,	0,1620,24092,24745,24893,25098,26585,27069,27402,27740,29080,29299,31325,
#Partially deleted in new
chr3	101827992	101857459	chr3:101827992-101857459	0	+	101852095	101857459	789624	11	192,140,31,104,773,106,147,64,170,111,168,	0,24092,24745,24893,25098,26585,27069,27402,27740,29080,29299,
#Partially deleted in new
chr3	101849513	101859523	chr3:101849513-101859523	1	+	101849628	101859371	789624	13	404,140,31,104,144,263,106,147,64,170,111,168,206,	0,2571,3224,3372,3577,4087,5064,5548,5881,6219,7559,7778,9804,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	101849513	101861022	chr3:101849513-101861022	3	+	101849628	101859371	789624	12	404,140,31,104,773,106,147,64,170,111,168,1705,	0,2571,3224,3372,3577,5064,5548,5881,6219,7559,7778,9804,
#Deleted in new
chr3	101849525	101852818	chr3:101849525-101852818	0	+	101849525	101849525	8553170	3	392,140,81,	0,2559,3212,
#Deleted in new
chr3	101850262	101853215	chr3:101850262-101853215	0	+	101852095	101853215	789624	5	164,140,31,104,125,	0,1822,2475,2623,2828,
#Deleted in new
chr3	101854647	101856017	chr3:101854647-101856017	0	+	101854647	101854647	8553170	3	36,147,623,	0,414,747,
#Partially deleted in new
chr3	101855732	101859527	chr3:101855732-101859527	0	+	101855732	101859371	789624	3	170,168,210,	0,1559,3585,
#Deleted in new
chr3	101856680	101859523	chr3:101856680-101859523	0	+	101856680	101856680	8553170	3	503,168,206,	0,611,2637,
#Deleted in new
chr3	101857199	101859539	chr3:101857199-101859539	0	+	101857199	101857199	8553170	2	260,222,	0,2118,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	101940858	101997926	chr3:101940858-101997926	3	+	101940858	101940858	5263520	4	167,101,337,1446,	0,19503,53702,55622,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	101955076	101955185	chr3:101955076-101955185	3	+	101955076	101955076	8553170	1	109,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	101960357	101997926	chr3:101960357-101997926	3	+	101960357	101960357	8553170	3	105,337,1446,	0,34203,36123,
#Partially deleted in new
chr3	101960385	101996532	chr3:101960385-101996532	0	+	101960385	101960385	8553170	3	346,108,52,	0,34175,36095,
#Partially deleted in new
chr3	102175682	102298173	chr3:102175682-102298173	0	+	102175682	102175682	8553170	3	126,388,9,	0,16661,122482,
#Partially deleted in new
chr3	102435014	102479841	chr3:102435014-102479841	1	+	102435114	102477618	789624	11	140,114,221,182,73,98,81,172,109,30,2399,	0,3465,17904,21178,22766,27266,29156,33949,35379,41997,42428,
#Partially deleted in new
chr3	102435032	102477657	chr3:102435032-102477657	1	+	102438487	102477618	789624	12	122,114,114,221,182,73,98,81,172,109,30,215,	0,1827,3447,17886,21160,22748,27248,29138,33931,35361,41979,42410,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	102663162	102673913	chr3:102663162-102673913	3	-	102663162	102663162	8553170	3	261,94,160,	0,4019,10591,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	102755063	102755170	chr3:102755063-102755170	3	-	102755063	102755063	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	103159959	103160124	chr3:103159959-103160124	3	+	103159959	103159959	8553170	1	165,	0,
#Deleted in new
chr3	103240986	103241230	chr3:103240986-103241230	7	+	103240986	103240986	16724991	1	244,	0,
#Deleted in new
chr3	103538634	103540487	chr3:103538634-103540487	7	-	103538634	103538634	16724991	1	1853,	0,
#Deleted in new
chr3	103630660	103630912	chr3:103630660-103630912	7	+	103630660	103630660	16724991	1	252,	0,
#Deleted in new
chr3	104063038	104063582	chr3:104063038-104063582	7	+	104063038	104063038	16724991	1	544,	0,
#Deleted in new
chr3	104502699	104503266	chr3:104502699-104503266	7	+	104502699	104502699	16724991	1	567,	0,
#Partially deleted in new
chr3	105366908	105576900	chr3:105366908-105576900	3	+	105367408	105571939	0	16	573,101,220,65,88,183,128,133,113,136,134,133,39,118,113,2424,	0,153158,157380,165093,166694,167754,173066,174724,178314,180240,180481,183218,185235,185559,204943,207568,
#Partially deleted in new
chr3	105366917	105525393	chr3:105366917-105525393	0	+	105366917	105366917	8553170	3	564,101,1105,	0,153149,157371,
#Partially deleted in new
chr3	105367342	105576861	chr3:105367342-105576861	1	+	105367408	105571939	0	15	139,101,220,65,88,183,128,133,113,136,134,133,118,113,2385,	0,152724,156946,164659,166260,167320,172632,174290,177880,179806,180047,182784,185125,204509,207134,
#Partially deleted in new
chr3	105439337	105545310	chr3:105439337-105545310	0	+	105439337	105439337	8553170	10	148,54,101,220,65,88,183,128,133,122,	0,1474,80729,84951,92664,94265,95325,100637,102295,105851,
#Partially deleted in new
chr3	105513324	105574552	chr3:105513324-105574552	1	+	105520146	105571939	789624	16	38,101,220,65,88,183,128,133,113,136,134,133,39,118,113,76,	0,6742,10964,18677,20278,21338,26650,28308,31898,33824,34065,36802,38819,39143,58527,61152,
#Partially deleted in new
chr3	105531234	105540057	chr3:105531234-105540057	0	+	105531234	105531234	8553170	5	145,65,88,183,83,	0,767,2368,3428,8740,
#Partially deleted in new
chr3	105533601	105575914	chr3:105533601-105575914	0	+	105533601	105571939	789624	10	89,183,113,136,134,133,39,118,113,1438,	0,1061,11621,13547,13788,16525,18542,18866,38250,40875,
#Partially deleted in new
chr3	105544601	105575914	chr3:105544601-105575914	0	+	105544601	105544601	8553170	8	734,136,134,133,39,118,113,1438,	0,2547,2788,5525,7542,7866,27250,29875,
#Deleted in new
chr3	105550219	105553171	chr3:105550219-105553171	0	+	105550219	105550219	8553170	3	40,39,704,	0,1924,2248,
#Partially deleted in new
chr3	105655460	105869043	chr3:105655460-105869043	3	-	105658969	105867577	0	19	3769,120,141,132,95,147,95,366,186,204,132,88,138,122,157,147,251,182,308,	0,14772,22970,26018,26263,29859,38033,46633,48527,64586,78548,81710,85033,90456,96001,120935,197953,211949,213275,
#Partially deleted in new
chr3	105655460	105869012	chr3:105655460-105869012	1	-	105658969	105867577	789624	19	3769,120,141,132,95,147,95,366,186,204,132,88,138,122,157,147,251,182,277,	0,14772,22970,26018,26263,29859,38033,46633,48527,64586,78548,81710,85033,90456,96001,120935,197953,211949,213275,
#Partially deleted in new
chr3	105655460	105869018	chr3:105655460-105869018	0	-	105749723	105867577	789624	20	3769,120,141,95,147,95,366,186,204,164,132,88,138,122,144,157,147,251,182,107,	0,14772,22970,26263,29859,38033,46633,48527,64586,68565,78548,81710,85033,90456,94161,96001,120935,197953,211949,213451,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	105658268	105673993	chr3:105658268-105673993	0	-	105658268	105658268	8553170	2	961,3761,	0,11964,
#Partially deleted in new
chr3	105658282	105868920	chr3:105658282-105868920	0	-	105670334	105867577	789624	20	947,120,26,141,132,95,147,95,366,186,204,132,88,138,122,157,147,251,182,185,	0,11950,12738,20148,23196,23441,27037,35211,43811,45705,61764,75726,78888,82211,87634,93179,118113,195131,209127,210453,
#Partially deleted in new
chr3	105658282	105868978	chr3:105658282-105868978	0	-	105839457	105867577	789624	21	947,120,23,141,132,95,147,95,366,186,204,132,88,138,122,157,147,48,251,182,243,	0,11950,12741,20148,23196,23441,27037,35211,43811,45705,61764,75726,78888,82211,87634,93179,118113,181140,195131,209127,210453,
#Partially deleted in new
chr3	105658330	105702176	chr3:105658330-105702176	0	-	105681473	105702176	789624	9	899,120,26,141,318,95,147,95,83,	0,11902,12690,20100,22962,23393,26989,35163,43763,
#Partially deleted in new
chr3	105658404	105682130	chr3:105658404-105682130	0	-	105658404	105658404	8553170	4	825,120,141,407,	0,11828,20026,23319,
#Partially deleted in new
chr3	105658414	105869039	chr3:105658414-105869039	0	-	105670334	105867577	789624	20	815,120,23,141,132,95,147,95,366,186,204,132,88,138,122,157,147,251,182,128,	0,11818,12609,20016,23064,23309,26905,35079,43679,45573,61632,75594,78756,82079,87502,93047,117981,194999,208995,210497,
#Partially deleted in new
chr3	105658440	105869401	chr3:105658440-105869401	0	-	105672457	105869388	789624	21	789,120,23,126,141,132,95,147,95,366,186,204,132,88,138,122,157,147,251,182,65,	0,11792,12583,13896,19990,23038,23283,26879,35053,43653,45547,61606,75568,78730,82053,87476,93021,117955,194973,208969,210896,
#Partially deleted in new
chr3	105680991	105869043	chr3:105680991-105869043	1	-	105681706	105867577	0	15	827,147,95,366,186,204,132,88,138,122,157,147,251,182,308,	0,4328,12502,21102,22996,39055,53017,56179,59502,64925,70470,95404,172422,186418,187744,
#Partially deleted in new
chr3	105680991	105869043	chr3:105680991-105869043	1	-	105681473	105867577	0	16	619,95,147,95,366,186,204,132,88,138,122,157,147,251,182,308,	0,732,4328,12502,21102,22996,39055,53017,56179,59502,64925,70470,95404,172422,186418,187744,
#Partially deleted in new
chr3	105751526	105869042	chr3:105751526-105869042	0	-	105751526	105867577	789624	5	92,147,251,182,131,	0,24869,101887,115883,117385,
#Partially deleted in new
chr3	105776464	105869422	chr3:105776464-105869422	0	-	105776464	105869388	789624	4	78,251,182,86,	0,76949,90945,92872,
#Partially deleted in new
chr3	105776521	105869552	chr3:105776521-105869552	0	-	105776521	105867577	789624	4	21,251,182,128,	0,76892,90888,92903,
#Partially deleted in new
chr3	105776522	105868559	chr3:105776522-105868559	0	-	105776522	105867577	789624	4	20,251,182,28,	0,76891,90887,92009,
#Partially deleted in new
chr3	105824182	105868972	chr3:105824182-105868972	0	-	105824182	105824182	8553170	4	59,251,182,61,	0,29231,43227,44729,
#Deleted in new
chr3	106325736	106326293	chr3:106325736-106326293	7	-	106325736	106325736	16724991	1	557,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	106515896	106515998	chr3:106515896-106515998	3	+	106515896	106515896	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	106688677	106688779	chr3:106688677-106688779	3	+	106688677	106688677	8553170	1	102,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	106836810	107240632	chr3:106836810-107240632	3	-	106836810	106836810	8553170	8	1972,118,95,36,160,42,105,190,	0,2664,84155,85247,91024,203264,293077,403632,
#Deleted in new
chr3	106848670	106849260	chr3:106848670-106849260	7	+	106848670	106848670	16724991	1	590,	0,
#Deleted in new
chr3	106894351	106895718	chr3:106894351-106895718	7	-	106894351	106894351	16724991	1	1367,	0,
#Partially deleted in new
chr3	106895728	106896408	chr3:106895728-106896408	7	-	106895728	106895728	16724991	2	162,114,	0,566,
#Deleted in new
chr3	106896482	106896821	chr3:106896482-106896821	7	-	106896482	106896482	16724991	1	339,	0,
#Deleted in new
chr3	106896890	106897671	chr3:106896890-106897671	7	-	106896890	106896890	16724991	1	781,	0,
#Deleted in new
chr3	106897670	106898268	chr3:106897670-106898268	7	-	106897670	106897670	16724991	1	598,	0,
#Deleted in new
chr3	106898888	106900591	chr3:106898888-106900591	7	+	106898888	106898888	16724991	1	1703,	0,
#Deleted in new
chr3	106900592	106900855	chr3:106900592-106900855	7	-	106900592	106900592	16724991	1	263,	0,
#Deleted in new
chr3	106900853	106901081	chr3:106900853-106901081	7	-	106900853	106900853	16724991	1	228,	0,
#Deleted in new
chr3	106901067	106901965	chr3:106901067-106901965	7	+	106901067	106901067	16724991	1	898,	0,
#Deleted in new
chr3	106902172	106902523	chr3:106902172-106902523	7	+	106902172	106902172	16724991	1	351,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	107007567	107007670	chr3:107007567-107007670	3	+	107007567	107007567	8553170	1	103,	0,
#Partially deleted in new
chr3	107104910	107107000	chr3:107104910-107107000	7	-	107104910	107104910	16724991	2	939,837,	0,1253,
#Partially deleted in new
chr3	107240691	107326701	chr3:107240691-107326701	0	+	107240691	107240691	8553170	3	396,169,236,	0,51070,85774,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	107240691	107248348	chr3:107240691-107248348	1	+	107240691	107240691	789624	2	396,2341,	0,5316,
#Partially deleted in new
chr3	107240691	107326964	chr3:107240691-107326964	3	+	107240691	107240691	789624	4	396,169,85,499,	0,51070,84915,85774,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	107240720	107245508	chr3:107240720-107245508	1	+	107240720	107240720	8553170	2	367,371,	0,4417,
#Partially deleted in new
chr3	107241021	107285664	chr3:107241021-107285664	1	+	107241021	107241021	8553170	2	66,345,	0,44298,
#Partially deleted in new
chr3	107272610	107322764	chr3:107272610-107322764	1	-	107272610	107272610	8553170	2	150,145,	0,50009,
#Partially deleted in new
chr3	107272629	107421221	chr3:107272629-107421221	0	-	107272629	107272629	8553170	5	131,251,124,254,27,	0,27272,107955,109293,148565,
#Partially deleted in new
chr3	107272666	107421304	chr3:107272666-107421304	0	-	107272666	107272666	8553170	4	94,124,254,110,	0,107918,109256,148528,
#Partially deleted in new
chr3	107289111	107322735	chr3:107289111-107322735	0	-	107289111	107289111	8553170	3	619,93,116,	0,31218,33508,
#Partially deleted in new
chr3	107289202	107322742	chr3:107289202-107322742	0	-	107289202	107289202	8553170	2	528,123,	0,33417,
#Partially deleted in new
chr3	107292556	107322744	chr3:107292556-107322744	0	-	107292556	107292556	8553170	3	97,142,125,	0,7345,30063,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	107317980	107322744	chr3:107317980-107322744	0	-	107317980	107317980	8553170	2	741,125,	0,4639,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	107318379	107322744	chr3:107318379-107322744	0	-	107318379	107318379	8553170	2	342,431,	0,3934,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	107321056	107322744	chr3:107321056-107322744	0	-	107321056	107321056	8553170	2	220,125,	0,1563,
#Partially deleted in new
chr3	107322468	107380607	chr3:107322468-107380607	3	-	107322468	107322468	8553170	3	301,195,23,	0,1839,58116,
#Deleted in new
chr3	107327829	107329197	chr3:107327829-107329197	7	-	107327829	107327829	16724991	1	1368,	0,
#Deleted in new
chr3	107329429	107329962	chr3:107329429-107329962	3	+	107329429	107329429	8553170	1	533,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	107377193	107378637	chr3:107377193-107378637	3	+	107377587	107378574	789624	1	1444,	0,
#Partially deleted in new
chr3	107522935	107811324	chr3:107522935-107811324	3	+	107710460	107805457	789624	17	172,72,74,171,243,196,68,81,75,81,1009,139,149,60,198,187,5955,	0,3391,122900,187516,193671,205829,210020,221694,225029,232662,249692,251783,255435,268304,275587,278159,282434,
#Partially deleted in new
chr3	107522960	107806342	chr3:107522960-107806342	1	+	107710460	107805457	789624	17	147,72,74,117,171,243,196,68,81,75,81,1009,139,149,198,187,973,	0,3366,122875,138867,187491,193646,205804,209995,221669,225004,232637,249667,251758,255410,275562,278134,282409,
#Partially deleted in new
chr3	107522975	107805861	chr3:107522975-107805861	1	+	107710460	107805457	789624	18	132,72,74,171,243,196,68,81,75,81,1009,139,149,90,60,198,187,492,	0,3351,122860,187476,193631,205789,209980,221654,224989,232622,249652,251743,255395,266811,268264,275547,278119,282394,
#Partially deleted in new
chr3	107522985	107526750	chr3:107522985-107526750	0	+	107522985	107522985	8553170	2	122,424,	0,3341,
#Partially deleted in new
chr3	107522990	107772682	chr3:107522990-107772682	0	+	107522990	107522990	8553170	7	117,72,74,81,75,81,55,	0,3336,122845,221639,224974,232607,249637,
#Partially deleted in new
chr3	107523002	107728940	chr3:107523002-107728940	0	+	107710460	107728940	789624	8	105,72,44,74,74,171,243,176,	0,3324,115499,118788,122833,187449,193604,205762,
#Partially deleted in new
chr3	107523042	107805598	chr3:107523042-107805598	1	+	107710460	107805527	789624	17	65,72,74,171,243,196,68,81,75,81,139,149,90,60,198,187,229,	0,3284,122793,187409,193564,205722,209913,221587,224922,232555,251676,255328,266744,268197,275480,278052,282327,
#Partially deleted in new
chr3	107523453	107710499	chr3:107523453-107710499	0	+	107710460	107710499	789624	4	198,72,74,48,	0,2873,122382,186998,
#Partially deleted in new
chr3	107524106	107716712	chr3:107524106-107716712	0	+	107710460	107716712	789624	6	88,72,74,171,90,106,	0,2220,121729,186345,187168,192500,
#Partially deleted in new
chr3	107524106	107728791	chr3:107524106-107728791	0	+	107710460	107728791	789624	6	88,72,74,171,243,27,	0,2220,121729,186345,192500,204658,
#Partially deleted in new
chr3	107524356	107716659	chr3:107524356-107716659	0	+	107710460	107716659	789624	5	211,72,74,171,53,	0,1970,121479,186095,192250,
#Partially deleted in new
chr3	107524356	107716737	chr3:107524356-107716737	0	+	107710460	107716737	789624	3	211,171,131,	0,186095,192250,
#Partially deleted in new
chr3	107525390	107732970	chr3:107525390-107732970	0	+	107710460	107732970	789624	7	100,72,74,171,243,196,15,	0,936,120445,185061,191216,203374,207565,
#Partially deleted in new
chr3	107525401	107773066	chr3:107525401-107773066	0	+	107710460	107773066	789624	11	86,72,74,171,243,196,68,81,75,81,439,	0,925,120434,185050,191205,203363,207554,219228,222563,230196,247226,
#Partially deleted in new
chr3	107599312	107805858	chr3:107599312-107805858	1	+	107710460	107805457	789624	16	276,252,171,243,196,68,81,75,81,1009,139,149,60,198,187,489,	0,46523,111139,117294,129452,133643,145317,148652,156285,173315,175406,179058,191927,199210,201782,206057,
#Partially deleted in new
chr3	107645835	107728806	chr3:107645835-107728806	0	+	107710460	107728806	789624	5	252,111,171,243,42,	0,11226,64616,70771,82929,
#Partially deleted in new
chr3	107645929	107716785	chr3:107645929-107716785	0	+	107710460	107716785	789624	4	158,44,171,179,	0,31497,64522,70677,
#Partially deleted in new
chr3	107645932	107710532	chr3:107645932-107710532	0	+	107710460	107710532	789624	4	155,111,203,81,	0,11129,13635,64519,
#Partially deleted in new
chr3	107645933	107728836	chr3:107645933-107728836	0	+	107710460	107728836	789624	5	154,203,171,243,72,	0,13634,64518,70673,82831,
#Partially deleted in new
chr3	107662588	107716699	chr3:107662588-107716699	0	+	107710460	107716699	789624	3	292,171,93,	0,47863,54018,
#Partially deleted in new
chr3	107674804	107728857	chr3:107674804-107728857	0	+	107710460	107728857	789624	4	32,171,243,93,	0,35647,41802,53960,
#Partially deleted in new
chr3	107684555	107772785	chr3:107684555-107772785	0	+	107684555	107684555	8553170	5	154,81,75,81,158,	0,60074,63409,71042,88072,
#Partially deleted in new
chr3	107716458	107728936	chr3:107716458-107728936	0	+	107716458	107716458	8553170	2	391,172,	0,12306,
#Partially deleted in new
chr3	107776204	107798659	chr3:107776204-107798659	0	+	107776204	107776204	8553170	5	145,149,90,60,137,	0,2166,13582,15035,22318,
#Partially deleted in new
chr3	107778502	107798671	chr3:107778502-107798671	0	+	107778502	107798671	789624	4	17,90,60,71,	0,11284,12737,20098,
#Partially deleted in new
chr3	107798590	107805471	chr3:107798590-107805471	0	+	107798590	107805457	789624	3	121,187,102,	0,2504,6779,
#Partially deleted in new
chr3	107834585	107928541	chr3:107834585-107928541	3	+	107834585	107834585	8553170	4	67,112,170,669,	0,623,89045,93287,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	107840227	107848998	chr3:107840227-107848998	1	-	107840227	107840227	8553170	4	177,108,104,93,	0,1877,3448,8678,
#Partially deleted in new
chr3	107841302	107878068	chr3:107841302-107878068	3	-	107841302	107841302	789624	11	910,104,213,149,55,182,100,123,59,57,167,	0,2373,7603,8520,8994,12570,13827,15777,31665,34827,36599,
#Partially deleted in new
chr3	107841661	107878076	chr3:107841661-107878076	1	-	107841661	107841661	789624	8	358,108,104,213,123,59,57,175,	0,443,2014,7244,15418,31306,34468,36240,
#Partially deleted in new
chr3	107842104	107855229	chr3:107842104-107855229	0	-	107842104	107842104	8553170	5	108,104,213,182,100,	0,1571,6801,11768,13025,
#Partially deleted in new
chr3	107842104	107855229	chr3:107842104-107855229	0	-	107842104	107842104	8553170	6	108,104,213,149,182,100,	0,1571,6801,7718,11768,13025,
#Partially deleted in new
chr3	107848656	107857119	chr3:107848656-107857119	1	-	107848656	107848656	8553170	4	462,182,100,40,	0,5216,6473,8423,
#Partially deleted in new
chr3	107853879	107878068	chr3:107853879-107878068	0	-	107853879	107853879	8553170	6	80,100,123,59,57,167,	0,1250,3200,19088,22250,24022,
#Partially deleted in new
chr3	107853997	107878068	chr3:107853997-107878068	1	-	107853997	107853997	8553170	7	57,41,100,123,59,57,167,	0,656,1132,3082,18970,22132,23904,
#Partially deleted in new
chr3	107855163	107873014	chr3:107855163-107873014	0	-	107855163	107855163	8553170	4	66,113,123,47,	0,149,1916,17804,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	107855163	107878071	chr3:107855163-107878071	0	-	107855163	107855163	8553170	7	66,123,131,267,59,57,170,	0,1916,3967,12147,17804,20966,22738,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	107855163	107873008	chr3:107855163-107873008	0	-	107855163	107855163	8553170	5	66,123,274,115,41,	0,1916,11068,12147,17804,
#Partially deleted in new
chr3	107855167	107873026	chr3:107855167-107873026	0	-	107855167	107855167	8553170	4	62,317,123,59,	0,840,1912,17800,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	107855195	107862038	chr3:107855195-107862038	0	-	107855195	107855195	8553170	3	34,123,133,	0,1884,6710,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	107857086	107878079	chr3:107857086-107878079	0	-	107857086	107857086	8553170	3	116,267,178,	0,10224,20815,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	107867310	107878068	chr3:107867310-107878068	1	-	107867310	107867310	8553170	6	267,59,57,77,185,167,	0,5657,8819,9144,10002,10591,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	107867310	107878076	chr3:107867310-107878076	0	-	107867310	107867310	8553170	3	267,59,175,	0,5657,10591,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	107867310	107878076	chr3:107867310-107878076	0	-	107867310	107867310	8553170	5	267,59,57,185,175,	0,5657,8819,10002,10591,
#Partially deleted in new
chr3	107883247	107928907	chr3:107883247-107928907	1	+	107883247	107883247	789624	3	59,170,1035,	0,40383,44625,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	108031002	108032261	chr3:108031002-108032261	3	-	108031002	108031002	8553170	1	1259,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	108036717	108038445	chr3:108036717-108038445	3	-	108036717	108036717	8553170	1	1728,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	108043093	108091025	chr3:108043093-108091025	1	-	108047283	108090908	0	9	4199,32,93,93,93,108,90,354,163,	0,8845,14383,15243,16358,17651,27999,36897,47769,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	108043297	108054739	chr3:108043297-108054739	0	-	108043297	108043297	8553170	2	3995,2801,	0,8641,
#Partially deleted in new
chr3	108047078	108058361	chr3:108047078-108058361	0	-	108047287	108058361	789624	7	214,33,25,32,47,93,25,	0,2540,3499,4860,8441,10398,11258,
#Partially deleted in new
chr3	108047078	108059532	chr3:108047078-108059532	0	-	108047287	108059532	789624	6	214,25,32,93,93,81,	0,3499,4860,10398,11258,12373,
#Partially deleted in new
chr3	108047080	108091014	chr3:108047080-108091014	3	-	108047287	108090908	0	11	212,33,25,32,93,93,93,108,90,354,152,	0,2538,3497,4858,10396,11256,12371,13664,24012,32910,43782,
#Partially deleted in new
chr3	108059456	108091862	chr3:108059456-108091862	0	-	108059456	108080255	789624	5	88,108,90,354,126,	0,1288,11636,20534,32280,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	108125820	108138610	chr3:108125820-108138610	3	+	108125820	108125820	789624	3	88,207,2297,	0,9323,10493,
#Partially deleted in new
chr3	108160811	108222570	chr3:108160811-108222570	3	-	108162476	108222322	789624	11	1844,67,63,132,72,123,69,91,119,163,460,	0,2851,4619,6042,6981,30709,45816,53119,57723,58598,61299,
#Deleted in new
chr3	108165434	108167176	chr3:108165434-108167176	0	-	108165434	108165434	8553170	2	59,323,	0,1419,
#Partially deleted in new
chr3	108166853	108222435	chr3:108166853-108222435	0	-	108218619	108222322	789624	7	132,72,123,69,91,119,325,	0,939,24667,39774,47077,51681,55257,
#Partially deleted in new
chr3	108213798	108222360	chr3:108213798-108222360	0	-	108213798	108213798	8553170	4	223,119,163,250,	0,4736,5611,8312,
#Deleted in new
chr3	108218392	108219544	chr3:108218392-108219544	0	-	108218392	108218392	8553170	2	261,135,	0,1017,
#Partially deleted in new
chr3	108219404	108222375	chr3:108219404-108222375	0	-	108219404	108222322	789624	2	168,358,	0,2613,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	108296489	108378280	chr3:108296489-108378280	3	+	108351813	108377278	789624	11	110,87,78,90,354,267,318,105,51,65,1023,	0,14165,31780,55298,56937,58625,61354,65852,79260,80003,80768,
#Partially deleted in new
chr3	108296528	108355179	chr3:108296528-108355179	0	+	108353461	108355179	789624	4	71,78,354,65,	0,31741,56898,58586,
#Partially deleted in new
chr3	108296543	108355130	chr3:108296543-108355130	0	+	108351813	108355130	789624	5	56,78,90,354,16,	0,31726,55244,56883,58571,
#Partially deleted in new
chr3	108296545	108377278	chr3:108296545-108377278	1	+	108351813	108377278	789624	10	54,87,78,90,354,267,318,105,65,21,	0,14109,31724,55242,56881,58569,61298,65796,79947,80712,
#Partially deleted in new
chr3	108296546	108377508	chr3:108296546-108377508	1	+	108328303	108377278	789624	11	53,87,78,90,92,267,318,105,51,65,251,	0,14108,31723,55241,57142,58568,61297,65795,79203,79946,80711,
#Partially deleted in new
chr3	108296547	108353770	chr3:108296547-108353770	0	+	108351813	108353770	789624	4	52,87,90,344,	0,14107,55240,56879,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	108296548	108353653	chr3:108296548-108353653	0	+	108351813	108353653	789624	5	51,139,78,90,227,	0,6107,31721,55239,56878,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	108302484	108378285	chr3:108302484-108378285	1	+	108351813	108377278	789624	10	310,78,90,354,267,318,105,51,65,1028,	0,25785,49303,50942,52630,55359,59857,73265,74008,74773,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	108310640	108378285	chr3:108310640-108378285	1	+	108351813	108377278	789624	9	101,90,354,267,318,105,51,65,1028,	0,41147,42786,44474,47203,51701,65109,65852,66617,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	108311784	108378285	chr3:108311784-108378285	1	+	108351813	108377278	789624	10	50,78,90,354,267,318,105,51,65,1028,	0,16485,40003,41642,43330,46059,50557,63965,64708,65473,
#Partially deleted in new
chr3	108325519	108326814	chr3:108325519-108326814	7	-	108325519	108325519	16724991	2	712,212,	0,1083,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	108353655	108378285	chr3:108353655-108378285	0	+	108353655	108376611	789624	6	125,267,318,105,51,1793,	0,1459,4188,8686,22094,22837,
#Boundary problem: need 42, got 0, diff 42, mapped 0.0
chr3	108380368	108529322	chr3:108380368-108529322	3	-	108381544	108529265	789624	42	1191,135,96,105,171,126,204,193,116,125,350,197,119,127,390,91,146,177,243,256,137,124,118,88,68,133,177,171,150,119,139,104,96,64,93,94,28,157,144,107,145,60,	0,3226,4318,8601,11391,13662,18268,18706,24969,27911,30214,33863,36443,40719,48123,50463,57185,59368,60649,64271,73637,75367,76397,78993,79931,82742,84269,89673,90329,96028,104722,106054,112131,112745,115411,117683,119086,119749,121343,125354,130074,148894,
#Partially deleted in new
chr3	108404918	108459433	chr3:108404918-108459433	0	-	108404918	108404918	8553170	16	535,125,350,197,119,127,390,91,146,177,243,256,137,124,118,72,	0,3361,5664,9313,11893,16169,23573,25913,32635,34818,36099,39721,49087,50817,51847,54443,
#Partially deleted in new
chr3	108455806	108461912	chr3:108455806-108461912	0	-	108455806	108455806	8553170	5	53,118,88,68,201,	0,959,3555,4493,5905,
#Deleted in new
chr3	108543366	108543875	chr3:108543366-108543875	7	-	108543366	108543366	16724991	1	509,	0,
#Partially deleted in new
chr3	108549868	108589452	chr3:108549868-108589452	3	-	108551148	108589375	0	21	1451,140,83,114,197,111,75,193,119,100,142,160,219,76,146,123,97,95,107,148,179,	0,2365,3779,4507,7349,9888,10085,10780,13257,15486,16628,18286,19520,26402,29412,29697,31546,32239,33108,35196,39405,
#Partially deleted in new
chr3	108549985	108585763	chr3:108549985-108585763	1	-	108551148	108581486	0	21	1334,140,83,114,197,111,75,193,119,100,142,160,219,76,146,123,97,95,107,148,98,	0,2248,3662,4390,7232,9771,9968,10663,13140,15369,16511,18169,19403,26285,29295,29580,31429,32122,32991,35079,35680,
#Partially deleted in new
chr3	108551066	108589411	chr3:108551066-108589411	1	-	108551148	108589375	789624	22	253,140,83,114,197,111,75,193,119,100,143,4,158,219,76,146,123,97,95,107,148,138,	0,1167,2581,3309,6151,8690,8887,9582,12059,14288,15430,15576,17090,18322,25204,28214,28499,30348,31041,31910,33998,38207,
#Partially deleted in new
chr3	108551115	108589452	chr3:108551115-108589452	0	-	108582129	108589375	789624	21	204,140,83,114,197,111,75,193,119,100,142,160,219,76,146,123,97,31,107,148,179,	0,1118,2532,3260,6102,8641,8838,9533,12010,14239,15381,17039,18273,25155,28165,28450,30299,30992,31861,33949,38158,
#Partially deleted in new
chr3	108560734	108589644	chr3:108560734-108589644	0	-	108560734	108560734	8553170	14	107,123,100,142,160,219,76,146,123,97,95,107,148,371,	0,2387,4620,5762,7420,8654,15536,18546,18831,20680,21373,22242,24330,28539,
#Deleted in new
chr3	108574564	108574698	chr3:108574564-108574698	3	+	108574564	108574564	8553170	1	134,	0,
#Deleted in new
chr3	108574682	108575064	chr3:108574682-108575064	7	+	108574682	108574682	16724991	1	382,	0,
#Partially deleted in new
chr3	108581474	108589456	chr3:108581474-108589456	0	-	108585704	108589375	789624	6	37,95,107,148,84,183,	0,633,1502,3590,4191,7799,
#Partially deleted in new
chr3	108584859	108589431	chr3:108584859-108589431	0	-	108584859	108584859	8553170	2	353,158,	0,4414,
#Partially deleted in new
chr3	108585704	108589375	chr3:108585704-108589375	1	-	108585704	108589375	789624	2	45,102,	0,3569,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr3	108589681	108694846	chr3:108589681-108694846	3	+	108605406	108690897	789624	33	158,104,70,156,117,81,125,115,120,102,93,53,77,618,33,170,45,26,166,96,128,69,97,104,88,102,126,140,121,144,102,117,1487,	0,15653,18407,21492,26859,34762,36163,39380,43271,45189,46934,47814,52756,54482,56935,58261,59236,61455,64463,72195,72448,79999,82878,84396,86104,87815,94534,96763,98294,98911,99141,101105,103678,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr3	108589704	108694032	chr3:108589704-108694032	0	+	108605406	108636623	789624	31	135,104,70,156,117,81,125,115,120,88,93,53,77,618,33,1020,26,166,96,128,69,97,104,88,102,126,121,144,102,117,673,	0,15630,18384,21469,26836,34739,36140,39357,43248,45166,46911,47791,52733,54459,56912,58238,61432,64440,72172,72425,79976,82855,84373,86081,87792,94511,98271,98888,99118,101082,103655,
#Partially deleted in new
chr3	108589733	108629111	chr3:108589733-108629111	0	+	108611323	108629111	789624	7	106,70,156,117,81,125,50,	0,18355,21440,26807,34710,36111,39328,
#Partially deleted in new
chr3	108590054	108648112	chr3:108590054-108648112	0	+	108605406	108648112	789624	16	42,104,70,156,117,81,125,115,120,102,93,53,77,618,33,170,	0,15280,18034,21119,26486,34389,35790,39007,42898,44816,46561,47441,52383,54109,56562,57888,
#Partially deleted in new
chr3	108602832	108611284	chr3:108602832-108611284	0	+	108605406	108611284	789624	5	75,216,104,70,111,	0,186,2502,5256,8341,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr3	108602850	108691387	chr3:108602850-108691387	1	+	108605406	108690897	789624	32	57,104,70,156,117,81,125,115,120,102,93,53,77,618,33,170,45,26,166,96,128,69,97,104,88,102,126,140,121,144,102,601,	0,2484,5238,8323,13690,21593,22994,26211,30102,32020,33765,34645,39587,41313,43766,45092,46067,48286,51294,59026,59279,66830,69709,71227,72935,74646,81365,83594,85125,85742,85972,87936,
#Deleted in new
chr3	108725439	108725536	chr3:108725439-108725536	7	-	108725439	108725439	16724991	1	97,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	108743423	108757015	chr3:108743423-108757015	0	-	108743423	108743423	8553170	5	68,85,81,81,196,	0,859,2007,13084,13396,
#Deleted in new
chr3	108755636	108757384	chr3:108755636-108757384	3	-	108755777	108757185	789624	3	269,81,326,	0,871,1422,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	108822697	108855005	chr3:108822697-108855005	3	+	108822927	108853877	789624	6	237,111,34,62,89,1386,	0,7972,16236,24370,26468,30922,
#Partially deleted in new
chr3	108822769	108847338	chr3:108822769-108847338	0	+	108822769	108822769	8553170	3	165,111,271,	0,7900,24298,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	108822771	108854867	chr3:108822771-108854867	1	+	108822927	108853877	789624	5	163,34,62,89,1248,	0,16162,24296,26394,30848,
#Partially deleted in new
chr3	108822772	108847380	chr3:108822772-108847380	0	+	108822772	108822772	8553170	4	162,111,34,313,	0,7897,16161,24295,
#Partially deleted in new
chr3	108822858	108839325	chr3:108822858-108839325	0	+	108822858	108822858	8553170	3	76,111,392,	0,7811,16075,
#Partially deleted in new
chr3	108907791	108953762	chr3:108907791-108953762	1	-	108908100	108953762	789624	4	418,128,150,204,	0,8295,12644,45767,
#Partially deleted in new
chr3	108907802	108953895	chr3:108907802-108953895	3	-	108908021	108953762	0	4	407,88,150,337,	0,8324,12633,45756,
#Partially deleted in new
chr3	108915939	108953766	chr3:108915939-108953766	1	-	108916082	108953762	789624	3	275,150,208,	0,4496,37619,
#Partially deleted in new
chr3	108958238	109118142	chr3:108958238-109118142	3	-	108958964	109118059	789624	28	882,195,54,73,153,67,70,102,72,246,63,139,106,129,155,144,65,71,80,126,106,160,109,91,69,35,54,148,	0,5175,11430,13091,21276,26477,28641,42318,46578,46831,48790,69512,74481,77101,96489,99104,101567,103749,104913,111393,135197,136670,141119,142178,145610,152510,156145,159756,
#Partially deleted in new
chr3	108958844	109118103	chr3:108958844-109118103	1	-	108958964	109118059	789624	27	276,195,54,73,153,67,70,102,72,246,139,106,129,155,144,65,71,80,126,106,160,109,91,69,35,54,109,	0,4569,10824,12485,20670,25871,28035,41712,45972,46225,68906,73875,76495,95883,98498,100961,103143,104307,110787,134591,136064,140513,141572,145004,151904,155539,159150,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	109018908	109019116	chr3:109018908-109019116	3	-	109018908	109018908	8553170	1	208,	0,
#Partially deleted in new
chr3	109101455	109110342	chr3:109101455-109110342	3	+	109101455	109101455	789624	3	104,86,374,	0,8308,8513,
#Partially deleted in new
chr3	109118251	109150113	chr3:109118251-109150113	0	+	109118251	109118251	8553170	3	144,53,395,	0,18592,31467,
#Partially deleted in new
chr3	109136713	109150123	chr3:109136713-109150123	0	+	109136713	109136713	5263520	3	28,53,1871,	0,130,11539,
#Partially deleted in new
chr3	109136713	109150514	chr3:109136713-109150514	3	+	109136847	109149894	789624	4	28,53,134,710,	0,130,11539,13091,
#Partially deleted in new
chr3	109136843	109150126	chr3:109136843-109150126	0	+	109136843	109136843	8553170	2	53,322,	0,12961,
#Partially deleted in new
chr3	109146286	109150109	chr3:109146286-109150109	0	+	109146286	109146286	8553170	2	60,305,	0,3518,
#Deleted in new
chr3	109148252	109150126	chr3:109148252-109150126	0	+	109148252	109149829	789624	2	109,322,	0,1552,
#Deleted in new
chr3	109148252	109149662	chr3:109148252-109149662	0	+	109148252	109149250	789624	2	134,454,	0,956,
#Deleted in new
chr3	109148252	109150364	chr3:109148252-109150364	0	+	109148252	109149748	789624	2	134,646,	0,1466,
#Duplicated in new
chr3	109176437	109177365	chr3:109176437-109177365	3	-	109176437	109176437	8553170	1	928,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	109178142	109216965	chr3:109178142-109216965	3	+	109178142	109178142	8553170	4	153,152,598,1071,	0,274,4878,37752,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	109178164	109185257	chr3:109178164-109185257	0	+	109178164	109178164	789624	3	131,152,2237,	0,252,4856,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	109225128	109225227	chr3:109225128-109225227	3	+	109225128	109225128	8553170	1	99,	0,
#Deleted in new
chr3	109241506	109243125	chr3:109241506-109243125	7	+	109241506	109241506	16724991	1	1619,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	109293787	109316517	chr3:109293787-109316517	3	-	109300392	109314542	789624	9	217,65,196,262,54,161,148,46,234,	0,6583,10687,14244,15238,15382,18757,20722,22496,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	109295238	109295498	chr3:109295238-109295498	3	+	109295238	109295238	8553170	1	260,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	109326140	109337572	chr3:109326140-109337572	3	-	109327987	109337517	789624	7	1884,199,289,51,161,124,109,	0,2749,4383,5593,5730,7729,11323,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	109326852	109330760	chr3:109326852-109330760	0	-	109326852	109326852	8553170	2	1172,1871,	0,2037,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	109327524	109337522	chr3:109327524-109337522	0	-	109327524	109327524	8553170	6	500,192,51,161,124,59,	0,1365,4209,4346,6345,9939,
#Partially deleted in new
chr3	109328889	109337517	chr3:109328889-109337517	0	-	109331929	109337517	789624	6	199,289,51,161,51,54,	0,1634,2844,2981,4980,8574,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	109329017	109332190	chr3:109329017-109332190	0	-	109329017	109329017	8553170	4	71,289,51,320,	0,1506,2716,2853,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	109329975	109337515	chr3:109329975-109337515	0	-	109329975	109329975	8553170	5	837,51,161,124,52,	0,1758,1895,3894,7488,
#Partially deleted in new
chr3	109331946	109336431	chr3:109331946-109336431	0	-	109331946	109333891	789624	3	85,124,111,	0,1923,4374,
#Partially deleted in new
chr3	109333395	109337545	chr3:109333395-109337545	0	-	109333395	109333395	8553170	2	598,82,	0,4068,
#Deleted in new
chr3	109364046	109364234	chr3:109364046-109364234	7	-	109364046	109364046	16724991	1	188,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	109396615	109397870	chr3:109396615-109397870	7	+	109396615	109396615	16724991	2	657,292,	0,963,
#Partially deleted in new
chr3	109409677	109410084	chr3:109409677-109410084	7	-	109409677	109409677	16724991	1	407,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	109409989	109495167	chr3:109409989-109495167	3	+	109409989	109409989	789624	5	218,160,46,40,1029,	0,7743,49893,66733,84149,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	109410161	109419017	chr3:109410161-109419017	1	+	109410161	109410161	8553170	2	46,1285,	0,7571,
#Partially deleted in new
chr3	109471328	109471812	chr3:109471328-109471812	7	-	109471328	109471328	16724991	1	484,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	109602827	109602897	chr3:109602827-109602897	3	+	109602827	109602827	5263520	1	70,	0,
#Deleted in new
chr3	109701455	109702218	chr3:109701455-109702218	7	-	109701455	109701455	16724991	1	763,	0,
#Partially deleted in new
chr3	109915975	109916940	chr3:109915975-109916940	7	-	109915975	109915975	16724991	2	255,363,	0,602,
#Partially deleted in new
chr3	109977539	109977767	chr3:109977539-109977767	7	-	109977539	109977539	16724991	1	228,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	110527481	110529582	chr3:110527481-110529582	3	-	110527481	110527481	8553170	4	285,95,168,253,	0,1179,1519,1848,
#Deleted in new
chr3	110551844	110551965	chr3:110551844-110551965	3	-	110551844	110551844	8553170	1	121,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	110682285	110683154	chr3:110682285-110683154	7	-	110682285	110682285	16724991	1	869,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	110727020	110727121	chr3:110727020-110727121	3	+	110727020	110727020	8553170	1	101,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	110888383	110893212	chr3:110888383-110893212	3	-	110888383	110888383	8553170	3	543,238,75,	0,3982,4754,
#Partially deleted in new
chr3	110892122	110893476	chr3:110892122-110893476	1	-	110892122	110892122	8553170	2	481,339,	0,1015,
#Partially deleted in new
chr3	110893707	111071524	chr3:110893707-111071524	0	-	110893707	110893707	8553170	3	123,208,33,	0,175556,177784,
#Partially deleted in new
chr3	110893764	111071363	chr3:110893764-111071363	3	-	110893764	110893764	8553170	3	66,208,294,	0,175499,177305,
#Partially deleted in new
chr3	111045387	111071553	chr3:111045387-111071553	1	-	111045387	111045387	8553170	3	522,208,62,	0,23876,26104,
#Partially deleted in new
chr3	111045779	111069959	chr3:111045779-111069959	1	-	111045779	111045779	789624	4	130,156,208,170,	0,6724,23484,24010,
#Partially deleted in new
chr3	111046901	111069390	chr3:111046901-111069390	0	-	111046901	111046901	8553170	3	130,156,127,	0,5602,22362,
#Partially deleted in new
chr3	111070070	111118841	chr3:111070070-111118841	0	+	111118789	111118841	789624	3	36,342,186,	0,41959,48585,
#Partially deleted in new
chr3	111070114	111118684	chr3:111070114-111118684	0	+	111070310	111118684	789624	3	215,342,29,	0,41915,48541,
#Partially deleted in new
chr3	111071742	111135954	chr3:111071742-111135954	3	+	111072017	111134215	0	6	435,342,297,118,152,2320,	0,40287,46913,50378,54441,61892,
#Partially deleted in new
chr3	111071867	111133990	chr3:111071867-111133990	1	+	111072017	111133692	0	6	310,342,297,118,152,330,	0,40162,46788,50253,54316,61793,
#Partially deleted in new
chr3	111072019	111126297	chr3:111072019-111126297	0	+	111072019	111126297	789624	4	158,342,118,114,	0,40010,50101,54164,
#Partially deleted in new
chr3	111072167	111193539	chr3:111072167-111193539	1	+	111072419	111193379	0	9	343,342,297,118,152,139,82,63,340,	0,39862,46488,49953,54016,72731,75235,120183,121032,
#Partially deleted in new
chr3	111072493	111112364	chr3:111072493-111112364	0	+	111072493	111072493	8553170	2	494,335,	0,39536,
#Partially deleted in new
chr3	111073415	111118791	chr3:111073415-111118791	0	+	111073415	111073415	8553170	3	76,342,136,	0,38614,45240,
#Partially deleted in new
chr3	111074203	111118703	chr3:111074203-111118703	0	+	111074228	111118703	789624	4	47,93,342,48,	0,2981,37826,44452,
#Partially deleted in new
chr3	111074894	111112117	chr3:111074894-111112117	0	+	111074894	111074894	8553170	3	348,93,108,	0,2290,37115,
#Partially deleted in new
chr3	111192350	111275563	chr3:111192350-111275563	0	+	111192350	111275345	789624	2	63,251,	0,82962,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	111292718	111542302	chr3:111292718-111542302	0	+	111542248	111542302	789624	5	167,90,137,69,83,	0,71794,73063,249216,249501,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	111466312	111497095	chr3:111466312-111497095	3	-	111466312	111466312	8553170	2	203,208,	0,30575,
#Deleted in new
chr3	111478736	111478943	chr3:111478736-111478943	7	+	111478736	111478736	16724991	1	207,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	111542008	111652372	chr3:111542008-111652372	1	+	111542248	111649806	789624	14	301,357,125,208,56,91,189,93,69,72,66,90,124,2675,	0,3037,25514,37018,43314,56111,58717,64691,81745,82324,95187,96070,105534,107689,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	111542117	111652241	chr3:111542117-111652241	3	+	111542248	111649806	789624	15	192,357,125,48,208,56,91,189,93,69,72,66,90,124,2544,	0,2928,25405,35384,36909,43205,56002,58608,64582,81636,82215,95078,95961,105425,107580,
#Partially deleted in new
chr3	111542149	111607078	chr3:111542149-111607078	1	+	111542248	111606821	789624	8	160,357,125,208,56,91,189,379,	0,2896,25373,36877,43173,55970,58576,64550,
#Partially deleted in new
chr3	111542183	111577540	chr3:111542183-111577540	0	+	111542248	111567535	789624	4	126,283,125,39,	0,2862,25339,35318,
#Partially deleted in new
chr3	111542192	111665750	chr3:111542192-111665750	0	+	111542248	111649806	789624	15	117,357,125,208,56,91,189,93,69,72,63,90,124,161,224,	0,2853,25330,36834,43130,55927,58533,64507,81561,82140,95006,95886,105350,107505,123334,
#Partially deleted in new
chr3	111567580	111579459	chr3:111567580-111579459	0	+	111567580	111579398	789624	2	67,433,	0,11446,
#Deleted in new
chr3	111570637	111571054	chr3:111570637-111571054	7	-	111570637	111570637	16724991	1	417,	0,
#Deleted in new
chr3	111592899	111595443	chr3:111592899-111595443	3	-	111593544	111594201	0	2	2167,144,	0,2400,
#Partially deleted in new
chr3	111633671	111635089	chr3:111633671-111635089	7	+	111633671	111633671	16724991	3	157,631,171,	0,311,1247,
#Partially deleted in new
chr3	111674675	111846447	chr3:111674675-111846447	1	+	111675245	111845869	789624	4	733,461,242,627,	0,33250,39211,171145,
#Partially deleted in new
chr3	111674675	111726996	chr3:111674675-111726996	3	+	111675245	111720882	789624	4	733,461,242,6274,	0,33250,39211,46047,
#Partially deleted in new
chr3	111674921	111846266	chr3:111674921-111846266	1	+	111675245	111732670	789624	5	487,461,242,85,446,	0,33004,38965,57697,170899,
#Deleted in new
chr3	111676735	111677433	chr3:111676735-111677433	3	-	111676735	111676735	789624	2	400,91,	0,607,
#Partially deleted in new
chr3	111691347	111708251	chr3:111691347-111708251	0	+	111691347	111691347	8553170	3	139,64,326,	0,1118,16578,
#Partially deleted in new
chr3	111732496	111976267	chr3:111732496-111976267	1	+	111845868	111974563	789624	18	207,115,1349,384,144,138,156,111,90,144,141,100,205,91,147,220,86,1845,	0,113324,151567,180822,186575,187785,206978,208038,212771,216435,220075,221433,229611,234116,235181,237193,241235,241926,
#Partially deleted in new
chr3	111859179	111976515	chr3:111859179-111976515	3	+	111884077	111974563	789624	17	397,1349,384,144,138,156,111,90,144,141,100,205,91,147,220,86,2093,	0,24884,54139,59892,61102,80295,81355,86088,89752,93392,94750,102928,107433,108498,110510,114552,115243,
#Partially deleted in new
chr3	111859179	111976517	chr3:111859179-111976517	1	+	111884077	111974563	789624	18	397,1349,384,144,138,129,156,111,90,144,141,100,205,91,147,220,86,2095,	0,24884,54139,59892,61102,73089,80295,81355,86088,89752,93392,94750,102928,107433,108498,110510,114552,115243,
#Partially deleted in new
chr3	111859290	111969849	chr3:111859290-111969849	0	+	111884077	111969849	789624	15	286,1349,384,144,138,156,111,90,144,141,100,205,91,147,160,	0,24773,54028,59781,60991,80184,81244,85977,89641,93281,94639,102817,107322,108387,110399,
#Partially deleted in new
chr3	111859749	111885795	chr3:111859749-111885795	1	+	111884077	111885637	789624	2	129,1732,	0,24314,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	111859759	111917663	chr3:111859759-111917663	1	+	111884077	111913729	789624	3	119,1349,4345,	0,24304,53559,
#Partially deleted in new
chr3	111859795	111976247	chr3:111859795-111976247	1	+	111884077	111974563	789624	18	83,1349,384,144,138,129,156,111,90,144,141,100,205,91,147,220,86,1825,	0,24268,53523,59276,60486,72473,79679,80739,85472,89136,92776,94134,102312,106817,107882,109894,113936,114627,
#Partially deleted in new
chr3	111883962	111976289	chr3:111883962-111976289	1	+	111884077	111974563	789624	16	1450,384,144,138,156,111,90,144,141,100,205,91,147,220,86,1867,	0,29356,35109,36319,55512,56572,61305,64969,68609,69967,78145,82650,83715,85727,89769,90460,
#Partially deleted in new
chr3	111884717	111952613	chr3:111884717-111952613	0	+	111884717	111952613	789624	11	695,384,144,138,129,156,111,90,144,189,42,	0,28601,34354,35564,47551,54757,55817,60550,64214,64984,67854,
#Partially deleted in new
chr3	111911609	111976465	chr3:111911609-111976465	1	+	111911631	111974563	789624	15	115,384,144,138,129,156,111,90,100,205,91,147,220,86,2043,	0,1709,7462,8672,20659,27865,28925,33658,42320,50498,55003,56068,58080,62122,62813,
#Partially deleted in new
chr3	111939526	111945440	chr3:111939526-111945440	0	+	111939526	111939526	8553170	3	104,111,173,	0,1008,5741,
#Partially deleted in new
chr3	111948970	111975932	chr3:111948970-111975932	0	+	111948970	111974563	789624	10	105,141,100,21,205,91,147,220,86,1510,	0,3601,4959,9304,13137,17642,18707,20719,24761,25452,
#Partially deleted in new
chr3	111953771	111967753	chr3:111953771-111967753	0	+	111953771	111953771	8553170	4	258,205,91,76,	0,8336,12841,13906,
#Partially deleted in new
chr3	111953826	111957244	chr3:111953826-111957244	0	+	111953826	111953826	8553170	2	203,226,	0,3192,
#Partially deleted in new
chr3	111953929	111962312	chr3:111953929-111962312	0	+	111953929	111962312	789624	5	100,15,21,36,205,	0,3306,4345,6215,8178,
#Partially deleted in new
chr3	111957485	111976209	chr3:111957485-111976209	0	+	111957485	111957485	8553170	8	53,21,205,91,147,220,86,1787,	0,789,4622,9127,10192,12204,16246,16937,
#Partially deleted in new
chr3	111958038	111966703	chr3:111958038-111966703	0	+	111958038	111958038	8553170	4	257,36,205,91,	0,2106,4069,8574,
#Partially deleted in new
chr3	111961944	111976453	chr3:111961944-111976453	0	+	111961944	111961944	8553170	6	368,91,147,220,86,2031,	0,4668,5733,7745,11787,12478,
#Partially deleted in new
chr3	111979009	111992271	chr3:111979009-111992271	0	+	111979061	111986349	789624	4	194,112,138,895,	0,7254,7904,12367,
#Partially deleted in new
chr3	111979017	111982321	chr3:111979017-111982321	0	+	111979017	111979017	8553170	2	186,538,	0,2766,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	111979034	111993363	chr3:111979034-111993363	3	+	111979061	111991721	789624	5	169,184,112,138,1987,	0,2749,7229,7879,12342,
#Partially deleted in new
chr3	111979051	111991976	chr3:111979051-111991976	0	+	111979061	111986930	789624	3	152,138,600,	0,7862,12325,
#Partially deleted in new
chr3	111979052	111991540	chr3:111979052-111991540	1	+	111979061	111990741	789624	6	151,184,112,138,52,164,	0,2731,7211,7861,11647,12324,
#Partially deleted in new
chr3	111998663	112013799	chr3:111998663-112013799	1	+	111999422	112013551	789624	5	451,182,175,103,390,	0,757,2108,13099,14746,
#Partially deleted in new
chr3	111998738	112013887	chr3:111998738-112013887	3	+	111999422	112013551	789624	5	376,356,175,103,478,	0,508,2033,13024,14671,
#Partially deleted in new
chr3	111998794	112013883	chr3:111998794-112013883	1	+	111999422	112013551	789624	5	320,277,175,103,474,	0,531,1977,12968,14615,
#Partially deleted in new
chr3	111999188	112013881	chr3:111999188-112013881	1	+	111999422	112013551	789624	4	414,175,103,472,	0,1583,12574,14221,
#Partially deleted in new
chr3	111999347	112013720	chr3:111999347-112013720	0	+	111999422	112013720	789624	2	255,311,	0,14062,
#Partially deleted in new
chr3	112000522	112013881	chr3:112000522-112013881	1	+	112000843	112013551	789624	4	170,175,103,472,	0,249,11240,12887,
#Partially deleted in new
chr3	112000771	112013882	chr3:112000771-112013882	0	+	112000771	112013471	789624	2	175,473,	0,12638,
#Partially deleted in new
chr3	112030930	112031649	chr3:112030930-112031649	7	-	112030930	112030930	16724991	2	221,256,	0,463,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr3	112034842	112081165	chr3:112034842-112081165	1	+	112034845	112081084	789624	18	51,250,131,68,194,39,229,131,113,107,137,108,111,117,172,269,137,252,	0,3229,7077,9412,10907,12131,12896,15001,15828,22182,26944,28682,31549,39453,40478,42033,43899,46071,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	112039619	112081269	chr3:112039619-112081269	0	+	112041957	112047445	789624	17	130,131,68,191,113,229,131,113,107,137,108,111,117,172,269,137,356,	0,2300,4635,6133,7788,8119,10224,11051,17405,22167,23905,26772,34676,35701,37256,39122,41294,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	112041919	112081269	chr3:112041919-112081269	1	+	112041957	112081084	789624	15	131,68,191,229,131,113,107,137,108,111,117,172,269,137,356,	0,2335,3833,5819,7924,8751,15105,19867,21605,24472,32376,33401,34956,36822,38994,
#Partially deleted in new
chr3	112042977	112047967	chr3:112042977-112047967	0	+	112043046	112047967	789624	5	87,68,194,39,229,	0,1277,2772,3996,4761,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	112086334	112118226	chr3:112086334-112118226	1	+	112086407	112116998	789624	4	211,130,128,1585,	0,7025,16503,30307,
#Partially deleted in new
chr3	112086334	112128749	chr3:112086334-112128749	1	+	112086407	112119516	789624	5	211,130,128,94,517,	0,7025,16503,33134,41898,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	112086348	112118210	chr3:112086348-112118210	3	+	112086407	112116646	789624	6	197,130,128,71,182,1569,	0,7011,16489,23194,26615,30293,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	112086436	112117239	chr3:112086436-112117239	0	+	112086436	112116998	789624	4	109,130,128,598,	0,6923,16401,30205,
#Partially deleted in new
chr3	112086437	112109828	chr3:112086437-112109828	0	+	112086437	112086437	8553170	4	108,130,128,286,	0,6922,16400,23105,
#Deleted in new
chr3	112111451	112113018	chr3:112111451-112113018	0	+	112111451	112111451	8553170	3	329,183,55,	0,440,1512,
#Partially deleted in new
chr3	112111453	112131004	chr3:112111453-112131004	0	+	112111453	112111453	8553170	6	327,121,182,226,94,2772,	0,885,1510,5188,8015,16779,
#Deleted in new
chr3	112112800	112112898	chr3:112112800-112112898	3	+	112112800	112112800	5263520	1	98,	0,
#Partially deleted in new
chr3	112120840	112133305	chr3:112120840-112133305	3	-	112123454	112133120	789624	6	2932,29,47,45,69,214,	0,4385,6146,7176,9604,12251,
#Partially deleted in new
chr3	112123095	112133254	chr3:112123095-112133254	1	-	112123454	112133120	789624	6	677,29,47,45,75,163,	0,2130,3891,4921,7349,9996,
#Partially deleted in new
chr3	112123224	112133258	chr3:112123224-112133258	0	-	112128182	112133120	789624	6	548,29,47,212,69,167,	0,2001,3762,4792,7220,9867,
#Partially deleted in new
chr3	112123304	112133166	chr3:112123304-112133166	0	-	112128182	112133120	789624	5	468,47,212,69,75,	0,3682,4712,7140,9787,
#Partially deleted in new
chr3	112123454	112133251	chr3:112123454-112133251	1	-	112123454	112133120	789624	5	318,29,47,69,160,	0,1771,3532,6990,9637,
#Partially deleted in new
chr3	112123560	112133225	chr3:112123560-112133225	0	-	112123560	112130491	789624	7	212,29,47,45,75,274,134,	0,1665,3426,4456,6884,9076,9531,
#Partially deleted in new
chr3	112123606	112133270	chr3:112123606-112133270	0	-	112123606	112130491	789624	7	166,29,47,45,69,274,179,	0,1619,3380,4410,6838,9030,9485,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	112133422	112135359	chr3:112133422-112135359	3	+	112133422	112133422	8553170	1	1937,	0,
#Partially deleted in new
chr3	112140886	112294258	chr3:112140886-112294258	3	-	112141271	112286791	789624	29	395,107,53,127,186,132,171,99,126,149,52,150,186,196,120,98,126,167,82,175,144,103,162,129,166,129,101,175,166,	0,10970,14110,26334,27990,28310,38644,39677,41246,58434,59824,61363,63331,67291,76555,80241,90474,98953,103108,122037,123313,125351,129029,134010,136808,137842,139796,145817,153206,
#Partially deleted in new
chr3	112140904	112294227	chr3:112140904-112294227	1	-	112141271	112286791	789624	28	377,107,53,127,186,132,171,99,126,149,52,150,186,196,120,98,126,167,82,175,103,162,129,166,129,101,175,135,	0,10952,14092,26316,27972,28292,38626,39659,41228,58416,59806,61345,63313,67273,76537,80223,90456,98935,103090,122019,125333,129011,133992,136790,137824,139778,145799,153188,
#Partially deleted in new
chr3	112141215	112286879	chr3:112141215-112286879	0	-	112239996	112286791	789624	22	66,107,53,127,186,132,171,99,126,149,52,150,120,98,126,167,103,129,166,129,101,176,	0,10641,13781,26005,27661,27981,38315,39348,40917,58105,59495,61034,76226,79912,90145,98624,125022,133681,136479,137513,139467,145488,
#Deleted in new
chr3	112185479	112185998	chr3:112185479-112185998	7	-	112185479	112185479	16724991	1	519,	0,
#Partially deleted in new
chr3	112277704	112294227	chr3:112277704-112294227	0	-	112277704	112278827	789624	4	156,129,101,135,	0,1024,2978,16388,
#Partially deleted in new
chr3	112278767	112294216	chr3:112278767-112294216	0	-	112278767	112278767	8553170	4	167,101,175,124,	0,1915,7936,15325,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	112302477	112332791	chr3:112302477-112332791	3	+	112302477	112302477	789624	5	237,129,84,41,606,	0,24044,25133,26868,29708,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	112307120	112330324	chr3:112307120-112330324	0	+	112307120	112307120	8553170	5	78,129,96,41,75,	0,19401,20490,22225,23129,
#Deleted in new
chr3	112321139	112321443	chr3:112321139-112321443	7	+	112321139	112321139	16724991	1	304,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	112332346	112345075	chr3:112332346-112345075	0	+	112340910	112345075	789624	3	355,82,114,	0,8555,12615,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	112332499	112347830	chr3:112332499-112347830	0	+	112332694	112347830	789624	3	202,327,273,	0,12462,15058,
#Deleted in new
chr3	112332840	112335996	chr3:112332840-112335996	0	+	112332840	112332840	8553170	2	384,171,	0,2985,
#Partially deleted in new
chr3	112333067	112349819	chr3:112333067-112349819	0	+	112333212	112347594	789624	5	157,82,327,268,108,	0,7834,11894,14495,16644,
#Partially deleted in new
chr3	112333155	112362812	chr3:112333155-112362812	3	+	112333212	112361550	789624	6	69,82,327,273,108,1270,	0,7746,11806,14402,16556,28387,
#Partially deleted in new
chr3	112333155	112362132	chr3:112333155-112362132	1	+	112333212	112361550	789624	7	69,75,82,327,273,108,590,	0,2787,7746,11806,14402,16556,28387,
#Partially deleted in new
chr3	112333177	112362784	chr3:112333177-112362784	1	+	112345089	112361550	789624	5	47,327,273,108,1242,	0,11784,14380,16534,28365,
#Partially deleted in new
chr3	112333177	112362809	chr3:112333177-112362809	0	+	112345089	112347594	789624	5	47,327,268,108,1267,	0,11784,14385,16534,28365,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	112396646	112409134	chr3:112396646-112409134	3	-	112396646	112396646	8553170	2	1502,61,	0,12427,
#Partially deleted in new
chr3	112463967	112499561	chr3:112463967-112499561	3	-	112466107	112499358	0	5	2416,47,144,315,291,	0,5790,7244,15487,35303,
#Partially deleted in new
chr3	112465925	112470022	chr3:112465925-112470022	0	-	112465925	112465925	8553170	3	458,47,51,	0,3832,4046,
#Partially deleted in new
chr3	112466107	112499358	chr3:112466107-112499358	1	-	112466107	112499358	0	4	276,47,315,88,	0,3650,13347,33163,
#Partially deleted in new
chr3	112469755	112470453	chr3:112469755-112470453	0	-	112469755	112469755	8553170	2	49,482,	0,216,
#Deleted in new
chr3	112524186	112525201	chr3:112524186-112525201	7	-	112524186	112524186	16724991	1	1015,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	112525547	112528142	chr3:112525547-112528142	3	-	112525547	112525547	8553170	1	2595,	0,
#Partially deleted in new
chr3	112532508	112561963	chr3:112532508-112561963	3	-	112532698	112561528	0	12	272,69,128,156,35,82,50,108,71,50,42,507,	0,1760,3966,5226,5637,9294,11548,16024,17683,20771,25867,28948,
#Partially deleted in new
chr3	112532509	112561916	chr3:112532509-112561916	1	-	112534195	112561528	0	11	1828,128,156,35,82,50,108,71,50,42,460,	0,3965,5225,5636,9293,11547,16023,17682,20770,25866,28947,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	112532521	112536767	chr3:112532521-112536767	0	-	112532521	112532521	8553170	2	259,2499,	0,1747,
#Partially deleted in new
chr3	112536209	112561924	chr3:112536209-112561924	0	-	112536209	112536209	8553170	10	393,156,35,82,50,108,71,50,42,468,	0,1525,1936,5593,7847,12323,13982,17070,22166,25247,
#Deleted in new
chr3	112537530	112538344	chr3:112537530-112538344	0	-	112537530	112537530	8553170	2	360,199,	0,615,
#Partially deleted in new
chr3	112537734	112561652	chr3:112537734-112561652	0	-	112548597	112561528	789624	9	156,35,82,50,82,44,50,42,196,	0,411,4068,6322,10798,12484,15545,20641,23722,
#Partially deleted in new
chr3	112538145	112562046	chr3:112538145-112562046	0	-	112538145	112548614	789624	8	35,82,50,108,71,50,42,201,	0,3657,5911,10387,12046,15134,20230,23700,
#Partially deleted in new
chr3	112543994	112561633	chr3:112543994-112561633	0	-	112543994	112543994	8553170	6	112,108,71,50,42,177,	0,4538,6197,9285,14381,17462,
#Partially deleted in new
chr3	112558137	112561857	chr3:112558137-112561857	0	-	112558137	112558137	8553170	2	280,401,	0,3319,
#Partially deleted in new
chr3	112561708	112580559	chr3:112561708-112580559	0	+	112563403	112580559	789624	6	114,149,99,131,68,14,	0,1676,7462,8831,12180,18837,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	112562009	112585577	chr3:112562009-112585577	3	+	112563403	112582736	789624	7	264,149,99,131,68,781,2907,	0,1375,7161,8530,11879,18536,20661,
#Partially deleted in new
chr3	112562036	112570574	chr3:112562036-112570574	0	+	112563403	112570574	789624	4	203,149,99,35,	0,1348,7134,8503,
#Partially deleted in new
chr3	112562071	112584156	chr3:112562071-112584156	1	+	112563403	112581297	789624	8	202,149,99,131,68,161,148,1486,	0,1313,7099,8468,11817,18474,19107,20599,
#Partially deleted in new
chr3	112563460	112583152	chr3:112563460-112583152	0	+	112563460	112563460	8553170	5	73,99,68,781,482,	0,5710,10428,17085,19210,
#Duplicated in new
chr3	112564127	112582730	chr3:112564127-112582730	1	+	112570592	112581297	789624	7	239,99,131,68,161,82,60,	0,5043,6412,9761,16418,17117,18543,
#Partially deleted in new
chr3	112570438	112580756	chr3:112570438-112580756	0	+	112570438	112570438	8553170	3	232,68,211,	0,3450,10107,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	112596793	112641269	chr3:112596793-112641269	3	-	112605416	112639905	789624	8	8970,81,104,149,137,157,1889,943,	0,10382,13184,19916,22174,33319,41234,43533,
#Partially deleted in new
chr3	112605100	112641300	chr3:112605100-112641300	1	-	112605416	112639905	789624	8	663,81,104,149,137,157,1889,377,	0,2075,4877,11609,13867,25012,32927,35823,
#Partially deleted in new
chr3	112605466	112610280	chr3:112605466-112610280	0	-	112605466	112610236	789624	3	297,81,303,	0,1709,4511,
#Partially deleted in new
chr3	112605599	112638097	chr3:112605599-112638097	0	-	112605599	112638097	789624	6	164,104,149,137,157,70,	0,4378,11110,13368,24513,32428,
#Deleted in new
chr3	112639399	112641056	chr3:112639399-112641056	0	-	112639399	112639399	8553170	2	517,493,	0,1164,
#Deleted in new
chr3	112640431	112641143	chr3:112640431-112641143	0	-	112640431	112640431	8553170	2	406,220,	0,492,
#Partially deleted in new
chr3	112640720	112649447	chr3:112640720-112649447	0	-	112640720	112640720	8553170	4	117,115,196,132,	0,203,2541,8595,
#Partially deleted in new
chr3	112640765	112649530	chr3:112640765-112649530	0	-	112640765	112640765	8553170	3	273,196,215,	0,2496,8550,
#Partially deleted in new
chr3	112696907	112697706	chr3:112696907-112697706	7	-	112696907	112696907	16724991	2	103,56,	0,743,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	112736446	112749319	chr3:112736446-112749319	3	-	112736446	112736446	789624	5	250,148,1318,217,89,	0,2231,3247,5252,12784,
#Partially deleted in new
chr3	112802477	112812819	chr3:112802477-112812819	3	+	112802477	112802477	8553170	3	171,96,60,	0,588,10282,
#Deleted in new
chr3	112802595	112803604	chr3:112802595-112803604	0	+	112802595	112802595	8553170	2	53,539,	0,470,
#Partially deleted in new
chr3	112815708	112845950	chr3:112815708-112845950	3	-	112815962	112845724	789624	6	267,124,249,318,66,272,	0,4063,11284,11658,13610,29970,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	112815708	112846856	chr3:112815708-112846856	1	-	112815962	112829367	789624	8	267,124,249,318,66,69,272,232,	0,4063,11284,11658,13610,22233,29970,30916,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	112815787	112845943	chr3:112815787-112845943	0	-	112837986	112845724	789624	8	188,124,249,318,66,69,98,265,	0,3984,11205,11579,13531,22154,25459,29891,
#Partially deleted in new
chr3	112818768	112829367	chr3:112818768-112829367	1	-	112818768	112829367	789624	5	10,124,249,318,49,	0,1003,8224,8598,10550,
#Partially deleted in new
chr3	112819767	112829385	chr3:112819767-112829385	1	-	112819767	112829385	789624	4	128,249,318,67,	0,7225,7599,9551,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	112921208	112975090	chr3:112921208-112975090	1	-	112923676	112974857	789624	7	2591,46,109,249,318,66,300,	0,3281,3876,7607,7981,9897,53582,
#Partially deleted in new
chr3	112922689	112975122	chr3:112922689-112975122	3	-	112923676	112974857	789624	8	1110,46,109,249,318,66,69,332,	0,1800,2395,6126,6500,8416,25166,52101,
#Partially deleted in new
chr3	112922987	112975103	chr3:112922987-112975103	1	-	112923794	112974857	789624	4	812,249,318,313,	0,5828,6202,51803,
#Partially deleted in new
chr3	112928917	112974912	chr3:112928917-112974912	1	-	112929142	112974857	789624	4	590,66,69,122,	0,2188,18938,45873,
#Partially deleted in new
chr3	112928917	112974912	chr3:112928917-112974912	1	-	112929142	112974857	789624	3	590,66,122,	0,2188,45873,
#Deleted in new
chr3	112990446	112991153	chr3:112990446-112991153	3	-	112990446	112990446	8553170	1	707,	0,
#Partially deleted in new
chr3	112990917	113001342	chr3:112990917-113001342	3	+	112990999	113000919	789624	6	418,99,131,100,119,493,	0,2108,4217,5974,8528,9932,
#Partially deleted in new
chr3	112990984	113001935	chr3:112990984-113001935	1	+	112990999	113000919	789624	5	351,131,100,119,1086,	0,4150,5907,8461,9865,
#Partially deleted in new
chr3	112990986	113000960	chr3:112990986-113000960	0	+	112990999	112996921	789624	4	349,100,119,111,	0,5905,8459,9863,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	112990990	113015060	chr3:112990990-113015060	0	+	112990999	113000919	789624	6	345,131,100,119,256,684,	0,4144,5901,8455,9859,23386,
#Partially deleted in new
chr3	112990999	113001373	chr3:112990999-113001373	1	+	112990999	113000919	789624	10	351,36,23,16,30,50,129,100,119,524,	0,352,390,2027,2044,2075,4137,5892,8446,9850,
#Partially deleted in new
chr3	112991008	113000919	chr3:112991008-113000919	0	+	112991044	112996921	789624	5	327,99,100,119,70,	0,2017,5883,8437,9841,
#Partially deleted in new
chr3	112991417	113000945	chr3:112991417-113000945	1	+	112991555	113000919	789624	6	141,99,131,100,119,96,	0,1608,3717,5474,8028,9432,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	112991566	113000944	chr3:112991566-113000944	1	+	112995149	113000919	789624	6	974,99,131,100,119,95,	0,1459,3568,5325,7879,9283,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	113002439	113019839	chr3:113002439-113019839	3	-	113005535	113019647	789624	9	3565,260,62,362,78,132,80,155,298,	0,5731,8203,8605,10294,10832,11513,15008,17102,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	113002443	113019733	chr3:113002443-113019733	1	-	113005535	113019647	789624	7	3561,260,62,362,80,155,192,	0,5727,8199,8601,11509,15004,17098,
#Partially deleted in new
chr3	113004916	113019654	chr3:113004916-113019654	0	-	113014027	113019647	789624	8	1088,260,62,362,78,132,84,113,	0,3254,5726,6128,7817,8355,9032,14625,
#Partially deleted in new
chr3	113004916	113019706	chr3:113004916-113019706	0	-	113004916	113004916	8553170	8	1088,260,62,362,670,80,155,165,	0,3254,5726,6128,7817,9036,12531,14625,
#Partially deleted in new
chr3	113004953	113019658	chr3:113004953-113019658	0	-	113014027	113019647	789624	4	1051,260,84,117,	0,3217,8995,14588,
#Deleted in new
chr3	113004963	113008800	chr3:113004963-113008800	0	-	113004963	113004963	8553170	2	1041,630,	0,3207,
#Partially deleted in new
chr3	113005175	113019664	chr3:113005175-113019664	0	-	113008416	113019647	789624	3	829,260,123,	0,2995,14366,
#Partially deleted in new
chr3	113005242	113019664	chr3:113005242-113019664	0	-	113014027	113019647	789624	8	762,260,62,362,78,90,80,123,	0,2928,5400,5802,7491,8029,8710,14299,
#Partially deleted in new
chr3	113005242	113019861	chr3:113005242-113019861	0	-	113014027	113019647	789624	8	762,260,62,362,78,132,80,320,	0,2928,5400,5802,7491,8029,8710,14299,
#Partially deleted in new
chr3	113005321	113019670	chr3:113005321-113019670	0	-	113014027	113019647	789624	6	683,260,62,362,80,129,	0,2849,5321,5723,8631,14220,
#Partially deleted in new
chr3	113005480	113019666	chr3:113005480-113019666	0	-	113014027	113019647	789624	8	524,260,62,121,78,132,80,125,	0,2690,5162,5564,7253,7791,8472,14061,
#Partially deleted in new
chr3	113005943	113019671	chr3:113005943-113019671	0	-	113008416	113019647	789624	6	61,260,362,80,155,130,	0,2227,5101,8009,11504,13598,
#Partially deleted in new
chr3	113008170	113011305	chr3:113008170-113011305	0	-	113008170	113008170	8553170	4	260,87,62,261,	0,1327,2472,2874,
#Partially deleted in new
chr3	113008170	113011536	chr3:113008170-113011536	0	-	113008170	113008170	8553170	3	260,62,492,	0,2472,2874,
#Deleted in new
chr3	113010503	113011275	chr3:113010503-113011275	0	-	113010503	113010503	8553170	2	201,231,	0,541,
#Partially deleted in new
chr3	113010657	113019644	chr3:113010657-113019644	0	-	113013948	113019644	789624	5	47,362,84,155,103,	0,387,3291,6790,8884,
#Partially deleted in new
chr3	113011044	113019832	chr3:113011044-113019832	0	-	113014027	113019647	789624	5	362,78,132,84,291,	0,1689,2227,2904,8497,
#Partially deleted in new
chr3	113011055	113019851	chr3:113011055-113019851	0	-	113014027	113019647	789624	3	351,80,310,	0,2897,8486,
#Partially deleted in new
chr3	113011092	113019721	chr3:113011092-113019721	0	-	113014027	113019647	789624	3	314,84,180,	0,2856,8449,
#Partially deleted in new
chr3	113011261	113019671	chr3:113011261-113019671	0	-	113011261	113011261	8553170	5	118,73,80,155,130,	0,2069,2691,6186,8280,
#Partially deleted in new
chr3	113012538	113019603	chr3:113012538-113019603	0	-	113012538	113012538	8553170	4	273,132,80,62,	0,733,1414,7003,
#Partially deleted in new
chr3	113012576	113019681	chr3:113012576-113019681	0	-	113014027	113019647	789624	4	235,90,80,140,	0,695,1376,6965,
#Partially deleted in new
chr3	113012792	113019671	chr3:113012792-113019671	0	-	113013948	113019647	789624	5	19,132,84,155,130,	0,479,1156,4655,6749,
#Partially deleted in new
chr3	113013274	113019160	chr3:113013274-113019160	0	-	113013274	113017483	789624	4	129,80,155,95,	0,678,4173,5791,
#Partially deleted in new
chr3	113019532	113088715	chr3:113019532-113088715	0	+	113019532	113019532	8553170	3	174,224,93,	0,42254,69090,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	113019535	113089024	chr3:113019535-113089024	1	+	113019535	113019535	8553170	2	171,402,	0,69087,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	113019540	113110475	chr3:113019540-113110475	1	+	113019540	113019540	8553170	3	166,224,374,	0,42246,90561,
#Deleted in new
chr3	113041389	113041814	chr3:113041389-113041814	7	-	113041389	113041389	16724991	1	425,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	113050911	113063443	chr3:113050911-113063443	3	-	113050911	113050911	8553170	3	794,122,337,	0,8034,12195,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	113142349	113167819	chr3:113142349-113167819	3	-	113142349	113142349	789624	4	1986,217,80,219,	0,10922,22777,25251,
#Partially deleted in new
chr3	113157707	113162020	chr3:113157707-113162020	1	+	113157707	113157707	8553170	3	305,90,87,	0,614,4226,
#Partially deleted in new
chr3	113211002	113250711	chr3:113211002-113250711	0	+	113249802	113250711	789624	4	155,92,178,157,	0,5184,38719,39552,
#Partially deleted in new
chr3	113211481	113287459	chr3:113211481-113287459	3	+	113249802	113286862	0	20	535,88,178,279,147,144,294,273,308,160,111,207,182,106,123,222,233,77,194,785,	0,4705,38240,39073,56817,59319,60928,61587,62893,66616,67191,67767,68342,69076,69549,71929,72853,73300,73890,75193,
#Partially deleted in new
chr3	113211533	113268426	chr3:113211533-113268426	0	+	113216211	113268426	789624	3	483,92,128,	0,4653,56765,
#Partially deleted in new
chr3	113211564	113252005	chr3:113211564-113252005	1	+	113249802	113250931	789624	4	452,92,178,1451,	0,4622,38157,38990,
#Partially deleted in new
chr3	113212194	113249867	chr3:113212194-113249867	0	+	113249802	113249867	789624	3	327,88,146,	0,3992,37527,
#Partially deleted in new
chr3	113212527	113287451	chr3:113212527-113287451	1	+	113249802	113286862	0	20	166,92,178,279,147,144,294,273,308,163,111,207,182,106,123,222,233,77,194,777,	0,3659,37194,38027,55771,58273,59882,60541,61847,65567,66145,66721,67296,68030,68503,70883,71807,72254,72844,74147,
#Partially deleted in new
chr3	113212527	113287456	chr3:113212527-113287456	1	+	113249802	113286862	0	20	166,92,178,279,147,144,294,273,308,160,111,207,182,106,123,222,233,77,194,782,	0,3659,37194,38027,55771,58273,59882,60541,61847,65570,66145,66721,67296,68030,68503,70883,71807,72254,72844,74147,
#Partially deleted in new
chr3	113212561	113249899	chr3:113212561-113249899	0	+	113249802	113249899	789624	3	132,234,178,	0,3625,37160,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	113212578	113271605	chr3:113212578-113271605	0	+	113212578	113212578	8553170	6	115,92,178,279,147,805,	0,3608,37143,37976,55720,58222,
#Partially deleted in new
chr3	113216350	113251592	chr3:113216350-113251592	1	+	113249802	113250931	789624	3	70,178,1038,	0,33371,34204,
#Partially deleted in new
chr3	113261697	113270944	chr3:113261697-113270944	0	+	113261697	113261697	8553170	3	270,147,144,	0,6601,9103,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	113269381	113286906	chr3:113269381-113286906	0	+	113269381	113269381	8553170	14	3322,273,308,160,111,207,182,106,123,222,233,77,194,232,	0,3687,4993,8716,9291,9867,10442,11176,11649,14029,14953,15400,15990,17293,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr3	113271011	113287451	chr3:113271011-113287451	0	+	113271011	113271011	8553170	13	1692,273,308,163,111,207,182,106,123,222,524,194,777,	0,2057,3363,7083,7661,8237,8812,9546,10019,12399,13323,14360,15663,
#Deleted in new
chr3	113274469	113279338	chr3:113274469-113279338	0	+	113274469	113274469	8553170	4	213,160,200,90,	0,3628,4203,4779,
#Deleted in new
chr3	113279565	113281057	chr3:113279565-113281057	0	+	113279565	113279565	8553170	3	440,106,27,	0,992,1465,
#Deleted in new
chr3	113284461	113286928	chr3:113284461-113286928	0	+	113284461	113285508	789624	4	106,77,127,254,	0,320,977,2213,
#Deleted in new
chr3	113284559	113286906	chr3:113284559-113286906	0	+	113284559	113286708	789624	3	8,77,232,	0,222,2115,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	113286946	113304067	chr3:113286946-113304067	0	-	113296885	113304067	789624	4	4802,135,178,152,	0,7740,9778,16969,
#Partially deleted in new
chr3	113290119	113441514	chr3:113290119-113441514	1	-	113291556	113433664	789624	35	1629,135,161,202,117,131,111,196,204,501,178,175,197,131,163,56,271,146,246,162,111,210,95,100,48,156,165,115,217,103,163,154,153,105,62,	0,4567,6605,13796,14916,16081,18038,36325,37496,40048,43286,51624,54396,68625,73025,73357,75919,83291,89186,90779,105630,106398,109786,110425,111120,111464,113732,116807,118986,126405,129897,136004,137067,143445,151333,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	113290852	113327797	chr3:113290852-113327797	0	-	113294014	113327797	789624	10	896,87,135,161,202,117,131,111,196,182,	0,3099,3834,5872,13063,14183,15348,17305,35592,36763,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	113291532	113294456	chr3:113291532-113294456	0	-	113291532	113291532	8553170	2	216,505,	0,2419,
#Partially deleted in new
chr3	113294749	113304277	chr3:113294749-113304277	0	-	113294749	113294749	8553170	3	72,161,362,	0,1975,9166,
#Partially deleted in new
chr3	113333450	113363310	chr3:113333450-113363310	0	-	113341857	113363310	789624	4	133,175,131,166,	0,8293,25294,29694,
#Deleted in new
chr3	113360266	113361319	chr3:113360266-113361319	7	+	113360266	113360266	16724991	1	1053,	0,
#Partially deleted in new
chr3	113361900	113515151	chr3:113361900-113515151	3	-	113445306	113506605	8553170	39	1407,56,271,246,162,64,111,210,95,100,48,156,165,115,103,163,154,153,105,202,91,74,88,103,181,485,222,148,132,266,138,140,119,107,94,144,48,99,72,	0,1576,4138,17405,18998,19950,33849,34617,38005,38644,39339,39683,41951,45026,54624,58116,64223,65286,71664,79552,82840,83386,84688,86137,88435,91565,95235,98716,103752,106238,106861,107198,127044,131305,132148,137538,141279,144606,153179,
#Partially deleted in new
chr3	113362847	113441513	chr3:113362847-113441513	0	-	113416613	113433664	789624	16	460,56,246,162,111,210,95,100,48,156,165,115,217,103,105,61,	0,629,16458,18051,32902,33670,37058,37697,38392,38736,41004,44079,46258,53677,70717,78605,
#Partially deleted in new
chr3	113362864	113441610	chr3:113362864-113441610	3	-	113363129	113433664	789624	21	443,56,271,146,246,162,111,210,95,100,48,156,165,115,217,103,163,154,153,105,158,	0,612,3174,10546,16441,18034,32885,33653,37041,37680,38375,38719,40987,44062,46241,53660,57152,63259,64322,70700,78588,
#Partially deleted in new
chr3	113381014	113397344	chr3:113381014-113397344	0	-	113381014	113381014	8553170	4	46,111,210,187,	0,14735,15503,16143,
#Deleted in new
chr3	113399967	113403878	chr3:113399967-113403878	0	-	113400666	113403878	789624	4	33,128,48,27,	0,577,1272,3884,
#Partially deleted in new
chr3	113403990	113427046	chr3:113403990-113427046	1	+	113403990	113403990	8553170	2	66,330,	0,22726,
#Partially deleted in new
chr3	113403997	113433992	chr3:113403997-113433992	3	+	113403997	113403997	789624	6	59,116,52,169,89,201,	0,13217,23559,24895,29585,29794,
#Partially deleted in new
chr3	113404010	113433581	chr3:113404010-113433581	0	-	113416613	113433581	789624	4	6,115,103,17,	0,2916,12514,29554,
#Partially deleted in new
chr3	113425981	113441515	chr3:113425981-113441515	0	-	113425981	113425981	8553170	3	296,105,63,	0,7583,15471,
#Partially deleted in new
chr3	113427186	113434945	chr3:113427186-113434945	0	-	113427186	113433664	789624	3	153,105,466,	0,6378,7293,
#Deleted in new
chr3	113432117	113432200	chr3:113432117-113432200	3	-	113432117	113432117	5263520	1	83,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr3	113442717	113515156	chr3:113442717-113515156	3	-	113445306	113506605	789624	18	2643,88,103,181,485,222,148,132,266,138,140,119,107,94,144,48,99,260,	0,3871,5320,7618,10748,14418,17899,22935,25421,26044,26381,46227,50488,51331,56721,60462,63789,72179,
#Partially deleted in new
chr3	113445253	113488990	chr3:113445253-113488990	0	-	113445306	113488990	789624	6	107,88,103,138,140,46,	0,1335,2784,23508,23845,43691,
#Partially deleted in new
chr3	113448834	113494130	chr3:113448834-113494130	0	-	113448834	113448834	8553170	11	1682,485,222,148,132,266,138,140,119,107,82,	0,4631,8301,11782,16818,19304,19927,20264,40110,44371,45214,
#Partially deleted in new
chr3	113489035	113514844	chr3:113489035-113514844	0	-	113489035	113506605	789624	7	28,107,94,144,48,99,48,	0,4170,5013,10403,14144,17471,25761,
#Partially deleted in new
chr3	113493215	113515187	chr3:113493215-113515187	0	-	113493215	113506605	789624	6	97,94,144,48,99,108,	0,833,6223,9964,13291,21864,
#Partially deleted in new
chr3	113498935	113514842	chr3:113498935-113514842	0	-	113498935	113498935	8553170	4	647,48,99,185,	0,4244,7571,15722,
#Partially deleted in new
chr3	113506548	113514906	chr3:113506548-113514906	0	-	113506548	113506605	789624	2	57,499,	0,7859,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr3	113532295	113629578	chr3:113532295-113629578	3	+	113533021	113627708	789624	25	948,122,171,46,102,84,88,72,94,44,72,146,74,67,74,124,118,137,109,77,47,106,111,114,1933,	0,34124,35244,44626,48312,49065,51113,52402,52881,60709,69292,70709,71664,72614,74745,75798,76123,78712,79790,83804,87384,91131,91327,93806,95350,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	113532554	113581875	chr3:113532554-113581875	0	+	113532554	113532554	8553170	6	689,122,171,46,102,515,	0,33865,34985,44367,48053,48806,
#Partially deleted in new
chr3	113532982	113627742	chr3:113532982-113627742	1	+	113533021	113627708	789624	26	261,122,171,46,102,84,88,72,94,44,72,146,74,67,74,124,118,137,109,15,77,47,106,111,114,97,	0,33437,34557,43939,47625,48378,50426,51715,52194,60022,68605,70022,70977,71927,74058,75111,75436,78025,79103,82080,83117,86697,90444,90640,93119,94663,
#Partially deleted in new
chr3	113533176	113567916	chr3:113533176-113567916	0	+	113533176	113533176	8553170	3	67,122,377,	0,33243,34363,
#Partially deleted in new
chr3	113584681	113602009	chr3:113584681-113602009	0	+	113584681	113584681	8553170	4	88,94,44,422,	0,495,8323,16906,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	113588747	113590189	chr3:113588747-113590189	3	-	113588747	113588747	8553170	2	58,407,	0,1035,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	113592702	113604975	chr3:113592702-113604975	0	+	113592702	113592702	8553170	5	346,72,146,74,66,	0,8885,10302,11257,12207,
#Deleted in new
chr3	113594875	113594942	chr3:113594875-113594942	3	+	113594875	113594875	5263520	1	67,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	113601355	113603061	chr3:113601355-113603061	0	+	113601355	113601355	8553170	2	304,57,	0,1649,
#Partially deleted in new
chr3	113602401	113627841	chr3:113602401-113627841	0	+	113602401	113602401	8553170	15	27,146,74,67,124,118,137,109,15,80,47,106,111,114,196,	0,603,1558,2508,5692,6017,8606,9684,12661,13695,17278,21025,21221,23700,25244,
#Deleted in new
chr3	113602682	113604023	chr3:113602682-113604023	0	+	113602682	113602682	8553170	2	468,64,	0,1277,
#Deleted in new
chr3	113606411	113608123	chr3:113606411-113608123	0	+	113606411	113606411	8553170	2	703,30,	0,1682,
#Partially deleted in new
chr3	113616026	113619915	chr3:113616026-113619915	0	+	113616026	113616026	8553170	2	150,236,	0,3653,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	113625913	113627920	chr3:113625913-113627920	0	+	113625913	113625913	8553170	2	302,275,	0,1732,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	113632703	113632998	chr3:113632703-113632998	3	+	113632703	113632703	8553170	1	295,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	113648384	113696646	chr3:113648384-113696646	3	-	113654943	113674878	789624	7	13041,97,83,29,65,116,277,	0,15928,21736,24963,26447,28897,47985,
#Partially deleted in new
chr3	113648384	113696646	chr3:113648384-113696646	1	-	113649839	113674878	789624	7	1466,97,83,29,65,116,277,	0,15928,21736,24963,26447,28897,47985,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	113653238	113674896	chr3:113653238-113674896	1	-	113654943	113674878	789624	5	8187,97,83,29,65,	0,11074,16882,20109,21593,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	113653238	113670233	chr3:113653238-113670233	0	-	113653238	113653238	8553170	3	8187,97,113,	0,11074,16882,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	113716459	113746274	chr3:113716459-113746274	3	-	113721759	113745949	0	5	5478,67,120,137,333,	0,6446,6962,7499,29482,
#Partially deleted in new
chr3	113718993	113746194	chr3:113718993-113746194	1	-	113721759	113745949	789624	3	2902,102,253,	0,5000,26948,
#Partially deleted in new
chr3	113720314	113746059	chr3:113720314-113746059	1	-	113721759	113745949	789624	4	1623,67,137,118,	0,2591,3644,25627,
#Partially deleted in new
chr3	113720929	113745794	chr3:113720929-113745794	1	-	113721759	113723464	789624	5	1008,67,120,137,53,	0,1976,2492,3029,24812,
#Partially deleted in new
chr3	113721428	113746230	chr3:113721428-113746230	1	-	113721759	113745949	789624	3	388,112,289,	0,2552,24513,
#Partially deleted in new
chr3	113721456	113739587	chr3:113721456-113739587	1	-	113721759	113723464	789624	5	481,67,120,134,162,	0,1449,1965,2502,17969,
#Partially deleted in new
chr3	113721589	113746249	chr3:113721589-113746249	0	-	113723517	113745949	789624	5	348,67,120,115,308,	0,1316,1832,2391,24352,
#Partially deleted in new
chr3	113721655	113746300	chr3:113721655-113746300	1	-	113721759	113745949	789624	5	282,67,120,134,359,	0,1250,1766,2303,24286,
#Deleted in new
chr3	113721759	113724597	chr3:113721759-113724597	1	-	113721759	113724597	789624	3	57,115,5,	0,2221,2833,
#Partially deleted in new
chr3	113723486	113746249	chr3:113723486-113746249	0	-	113723486	113745949	789624	3	31,134,308,	0,472,22455,
#Partially deleted in new
chr3	113723518	113746249	chr3:113723518-113746249	0	-	113723518	113723518	8553170	3	78,134,308,	0,440,22423,
#Deleted in new
chr3	113740822	113741254	chr3:113740822-113741254	7	-	113740822	113740822	16724991	1	432,	0,
#Deleted in new
chr3	113746871	113747408	chr3:113746871-113747408	3	-	113746871	113746871	8553170	2	260,43,	0,494,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	113747018	113812056	chr3:113747018-113812056	3	+	113778753	113809427	789624	15	95,95,129,215,138,152,163,109,123,115,64,204,95,172,2722,	0,31722,34031,37205,37677,39213,41694,42713,47853,48071,48857,51224,56564,58335,62316,
#Partially deleted in new
chr3	113747032	113779168	chr3:113747032-113779168	0	+	113747032	113747032	8553170	2	81,428,	0,31708,
#Partially deleted in new
chr3	113747036	113809697	chr3:113747036-113809697	0	+	113778753	113781065	789624	16	77,95,52,129,215,138,152,163,109,123,115,64,204,95,172,363,	0,31704,33695,34013,37187,37659,39195,41676,42695,47835,48053,48839,51206,56546,58317,62298,
#Partially deleted in new
chr3	113747041	113786320	chr3:113747041-113786320	0	+	113781066	113786320	789624	6	72,67,129,215,138,89,	0,31727,34008,37182,37654,39190,
#Partially deleted in new
chr3	113747049	113786330	chr3:113747049-113786330	0	+	113778753	113786330	789624	6	78,95,129,215,138,99,	0,31691,34000,37174,37646,39182,
#Partially deleted in new
chr3	113828181	113945560	chr3:113828181-113945560	0	+	113828181	113828181	8553170	19	98,147,85,104,96,81,116,133,163,88,138,119,143,104,177,58,111,106,163,	0,16321,41325,47302,47983,54570,72849,75958,80776,84891,87519,102532,105329,106250,108084,109904,111704,112058,117216,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr3	113838417	113947174	chr3:113838417-113947174	3	+	113838909	113945478	789624	18	519,147,85,104,96,81,116,133,163,138,119,143,104,177,58,111,106,1777,	0,6085,31089,37066,37747,44334,62613,65722,70540,77283,92296,95093,96014,97848,99668,101468,101822,106980,
#Partially deleted in new
chr3	113838817	113875867	chr3:113838817-113875867	0	+	113838817	113838817	8553170	4	119,147,85,384,	0,5685,30689,36666,
#Partially deleted in new
chr3	113838873	113901045	chr3:113838873-113901045	0	+	113838873	113838873	8553170	7	63,147,85,104,96,55,15,	0,5629,30633,36610,37291,43904,62157,
#Partially deleted in new
chr3	113838880	113934456	chr3:113838880-113934456	0	+	113838909	113909033	789624	11	56,147,85,104,81,116,148,138,119,143,25,	0,5622,30626,36603,43871,62150,70092,76820,91833,94630,95551,
#Partially deleted in new
chr3	113838899	113901135	chr3:113838899-113901135	0	+	113838899	113838899	8553170	3	37,85,105,	0,30607,62131,
#Partially deleted in new
chr3	113838904	113915838	chr3:113838904-113915838	0	+	113838909	113901041	789624	7	32,147,85,116,133,163,138,	0,5598,30602,62126,65235,70053,76796,
#Deleted in new
chr3	113844502	113844965	chr3:113844502-113844965	0	+	113844502	113844502	8553170	2	147,143,	0,320,
#Deleted in new
chr3	113850236	113850731	chr3:113850236-113850731	7	-	113850236	113850236	16724991	1	495,	0,
#Deleted in new
chr3	113885297	113886031	chr3:113885297-113886031	7	+	113885297	113885297	16724991	1	734,	0,
#Partially deleted in new
chr3	113890624	113945770	chr3:113890624-113945770	1	+	113890720	113945478	789624	13	135,116,133,163,138,119,143,104,177,58,111,106,373,	0,10406,13515,18333,25076,40089,42886,43807,45641,47461,49261,49615,54773,
#Partially deleted in new
chr3	113890664	113939950	chr3:113890664-113939950	0	+	113901105	113939950	789624	11	360,116,133,163,138,119,143,104,177,58,65,	0,10366,13475,18293,25036,40049,42846,43767,45601,47421,49221,
#Partially deleted in new
chr3	113897469	113947160	chr3:113897469-113947160	1	+	113901105	113945478	789624	13	344,116,133,163,138,119,143,104,177,58,111,106,1763,	0,3561,6670,11488,18231,33244,36041,36962,38796,40616,42416,42770,47928,
#Partially deleted in new
chr3	113897491	113915782	chr3:113897491-113915782	0	+	113909069	113915782	789624	3	322,163,82,	0,11466,18209,
#Deleted in new
chr3	113919221	113920200	chr3:113919221-113920200	7	+	113919221	113919221	16724991	1	979,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	113934486	113936923	chr3:113934486-113936923	0	+	113934486	113934486	8553170	2	49,658,	0,1779,
#Partially deleted in new
chr3	113938325	113947174	chr3:113938325-113947174	0	+	113938325	113938325	8553170	2	2020,1777,	0,7072,
#Partially deleted in new
chr3	113939725	113945760	chr3:113939725-113945760	0	+	113939725	113939725	8553170	3	271,106,363,	0,514,5672,
#Partially deleted in new
chr3	113947004	113947570	chr3:113947004-113947570	3	-	113947004	113947004	8553170	1	566,	0,
#Partially deleted in new
chr3	113947900	113962982	chr3:113947900-113962982	3	+	113948802	113960733	789624	6	290,170,711,168,176,2263,	0,893,5799,8438,10462,12819,
#Partially deleted in new
chr3	113947974	113961314	chr3:113947974-113961314	1	+	113948820	113960733	789624	7	212,49,144,711,168,176,595,	0,711,845,5725,8364,10388,12745,
#Partially deleted in new
chr3	113948064	113962978	chr3:113948064-113962978	0	+	113948802	113959543	789624	7	126,278,711,168,176,80,1927,	0,621,5635,8274,10298,11456,12987,
#Partially deleted in new
chr3	113948506	113953982	chr3:113948506-113953982	0	+	113948802	113953982	789624	2	457,283,	0,5193,
#Partially deleted in new
chr3	113954135	113962978	chr3:113954135-113962978	0	+	113954135	113958630	789624	3	275,168,4616,	0,2203,4227,
#Deleted in new
chr3	113957573	113963364	chr3:113957573-113963364	0	+	113957573	113957573	8553170	2	278,5002,	0,789,
#Partially deleted in new
chr3	113958453	113965401	chr3:113958453-113965401	0	+	113958453	113965312	789624	2	85,232,	0,6716,
#Partially deleted in new
chr3	113964136	114056613	chr3:113964136-114056613	3	-	113965154	114056466	789624	17	1223,146,153,144,102,83,110,455,250,191,154,224,179,144,142,39,237,	0,14049,14721,16513,37458,38319,40500,41371,46635,54541,67489,70788,72471,78566,82454,89460,92240,
#Partially deleted in new
chr3	113978308	114056549	chr3:113978308-114056549	0	-	114042827	114056466	789624	16	23,153,144,102,83,360,455,250,191,154,224,179,109,139,142,173,	0,549,2341,23286,24147,26078,27199,32463,40369,53317,56616,58299,58677,64394,68282,78068,
#Partially deleted in new
chr3	113978494	114001771	chr3:113978494-114001771	0	-	113978494	113978494	8553170	3	516,144,177,	0,2155,23100,
#Deleted in new
chr3	113984036	113984655	chr3:113984036-113984655	7	+	113984036	113984036	16724991	1	619,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	114004073	114056539	chr3:114004073-114056539	0	-	114004073	114004073	8553170	9	673,455,250,191,154,224,179,144,163,	0,1434,6698,14604,27552,30851,32534,38629,52303,
#Partially deleted in new
chr3	114005507	114056594	chr3:114005507-114056594	0	-	114005507	114056466	789624	9	455,250,191,154,224,179,144,142,218,	0,5264,13170,26118,29417,31100,37195,41083,50869,
#Partially deleted in new
chr3	114005832	114070751	chr3:114005832-114070751	0	+	114006011	114070751	789624	5	200,221,56,77,126,	0,59404,60395,62154,64793,
#Partially deleted in new
chr3	114035043	114056539	chr3:114035043-114056539	0	-	114035043	114056539	789624	4	105,179,144,163,	0,1564,7659,21333,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	114035093	114056487	chr3:114035093-114056487	0	-	114042819	114056466	789624	5	55,179,104,144,111,	0,1514,4291,7609,21283,
#Partially deleted in new
chr3	114042809	114056488	chr3:114042809-114056488	0	-	114042809	114042809	8553170	5	37,142,39,113,112,	0,3781,10787,11294,13567,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	114056734	114088349	chr3:114056734-114088349	1	+	114056849	114085904	789624	9	130,221,56,77,213,200,152,118,2677,	0,8502,9493,11252,13891,20008,23171,25942,28938,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	114056736	114088422	chr3:114056736-114088422	3	+	114065257	114085904	789624	10	128,108,221,56,77,213,200,152,118,2750,	0,262,8500,9491,11250,13889,20006,23169,25940,28936,
#Partially deleted in new
chr3	114056739	114070806	chr3:114056739-114070806	0	+	114056739	114056739	8553170	4	125,221,56,181,	0,8497,9488,13886,
#Deleted in new
chr3	114056750	114057548	chr3:114056750-114057548	0	+	114056750	114056750	8553170	2	114,550,	0,248,
#Partially deleted in new
chr3	114056756	114085979	chr3:114056756-114085979	1	+	114070661	114085904	789624	8	108,42,56,213,200,152,118,307,	0,8480,9471,13869,19986,23149,25920,28916,
#Partially deleted in new
chr3	114056781	114085952	chr3:114056781-114085952	1	+	114056849	114085904	789624	6	83,213,200,152,118,280,	0,13844,19961,23124,25895,28891,
#Partially deleted in new
chr3	114056803	114066344	chr3:114056803-114066344	0	+	114056803	114056803	8553170	4	61,108,221,117,	0,195,8433,9424,
#Partially deleted in new
chr3	114056966	114066565	chr3:114056966-114066565	0	+	114056966	114056966	8553170	3	55,221,338,	0,8270,9261,
#Partially deleted in new
chr3	114065243	114076844	chr3:114065243-114076844	0	+	114065257	114076844	789624	4	214,56,77,102,	0,984,2743,11499,
#Deleted in new
chr3	114065329	114068324	chr3:114065329-114068324	0	+	114065329	114065329	8553170	3	128,56,338,	0,898,2657,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	114066244	114079550	chr3:114066244-114079550	0	+	114066244	114066244	8553170	3	39,213,2808,	0,4381,10498,
#Partially deleted in new
chr3	114076838	114082695	chr3:114076838-114082695	0	+	114076838	114076838	8553170	3	104,152,143,	0,3067,5714,
#Partially deleted in new
chr3	114079866	114085938	chr3:114079866-114085938	0	+	114079866	114079866	8553170	3	191,118,266,	0,2810,5806,
#Partially deleted in new
chr3	114082552	114086253	chr3:114082552-114086253	0	+	114082552	114082552	8553170	2	242,581,	0,3120,
#Partially deleted in new
chr3	114082768	114086486	chr3:114082768-114086486	0	+	114082768	114082966	789624	3	26,41,814,	0,194,2904,
#Deleted in new
chr3	114103248	114103628	chr3:114103248-114103628	7	-	114103248	114103248	16724991	1	380,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	114128651	114199407	chr3:114128651-114199407	3	-	114128715	114171992	789624	8	261,283,197,143,113,305,120,135,	0,2466,10848,18763,31103,43071,50005,70621,
#Partially deleted in new
chr3	114128709	114179052	chr3:114128709-114179052	1	-	114128715	114171992	789624	8	203,48,136,197,143,113,305,396,	0,2408,2555,10790,18705,31045,43013,49947,
#Partially deleted in new
chr3	114128709	114179052	chr3:114128709-114179052	1	-	114128715	114171992	789624	7	203,283,197,143,113,305,396,	0,2408,10790,18705,31045,43013,49947,
#Partially deleted in new
chr3	114128709	114178698	chr3:114128709-114178698	1	-	114128715	114171992	789624	8	203,283,197,143,113,305,268,42,	0,2408,10790,18705,31045,43013,47216,49947,
#Partially deleted in new
chr3	114214312	114235394	chr3:114214312-114235394	1	+	114214312	114214312	8553170	3	238,301,204,	0,19029,20878,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	114214390	114236204	chr3:114214390-114236204	3	+	114214390	114214390	8553170	2	160,2863,	0,18951,
#Deleted in new
chr3	114231397	114233021	chr3:114231397-114233021	7	-	114231397	114231397	16724991	1	1624,	0,
#Deleted in new
chr3	114234630	114237101	chr3:114234630-114237101	1	-	114236252	114237074	789624	1	2471,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	114234635	114237578	chr3:114234635-114237578	2	-	114236252	114237074	789624	2	698,1857,	0,1086,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	114234974	114237578	chr3:114234974-114237578	1	-	114236252	114237074	789624	2	359,1857,	0,747,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	114291058	114308290	chr3:114291058-114308290	1	+	114293860	114308131	789624	5	2061,816,330,107,396,	0,2248,4486,8538,16836,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	114291101	114310288	chr3:114291101-114310288	3	+	114294061	114308131	0	5	195,123,330,107,2394,	0,2898,4443,8495,16793,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	114293985	114310287	chr3:114293985-114310287	1	+	114294061	114308131	0	4	137,330,107,2393,	0,1559,5611,13909,
#Deleted in new
chr3	114294027	114296020	chr3:114294027-114296020	0	+	114294027	114294027	8553170	2	95,476,	0,1517,
#Partially deleted in new
chr3	114294986	114307949	chr3:114294986-114307949	0	+	114295546	114307949	789624	4	67,330,107,55,	0,558,4610,12908,
#Deleted in new
chr3	114307574	114308051	chr3:114307574-114308051	0	+	114307574	114307574	8553170	2	93,157,	0,320,
#Partially deleted in new
chr3	114314500	115147271	chr3:114314500-115147271	3	-	114339004	114351858	789624	10	24926,1605,188,101,40,48,74,39,51,53,	0,35773,65716,74504,185851,379027,486600,585803,659865,832718,
#Deleted in new
chr3	114314500	114329714	chr3:114314500-114329714	3	-	114314500	114314500	8553170	1	15214,	0,
#Deleted in new
chr3	114316474	114316569	chr3:114316474-114316569	3	-	114316474	114316474	5263520	1	95,	0,
#Partially deleted in new
chr3	114338093	115071375	chr3:114338093-115071375	1	-	114339004	114351858	789624	12	1333,1605,188,101,40,48,40,68,70,39,51,157,	0,12180,42123,50911,162258,355434,375882,405618,535945,562210,636272,733125,
#Partially deleted in new
chr3	114338106	114624945	chr3:114338106-114624945	1	-	114339004	114351858	789624	6	1320,1605,188,101,40,69,	0,12167,42110,50898,162245,286770,
#Partially deleted in new
chr3	114338651	114759271	chr3:114338651-114759271	1	-	114339004	114351858	789624	7	775,1605,188,101,40,48,376,	0,11622,41565,50353,161700,354876,420244,
#Partially deleted in new
chr3	114338651	114624206	chr3:114338651-114624206	1	-	114339004	114351858	789624	6	775,1605,188,101,40,91,	0,11622,41565,50353,161700,285464,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	114338652	114383641	chr3:114338652-114383641	1	-	114339004	114380787	789624	5	774,1605,188,164,26,	0,11621,41564,42124,44963,
#Partially deleted in new
chr3	114338683	114758940	chr3:114338683-114758940	1	-	114339004	114351858	789624	8	743,1605,188,101,40,48,46,45,	0,11590,41533,50321,161668,354844,371584,420212,
#Partially deleted in new
chr3	114339303	114900342	chr3:114339303-114900342	0	-	114339303	114339303	789624	6	123,188,101,40,74,39,	0,40913,49701,161048,461797,561000,
#Partially deleted in new
chr3	114351685	114454683	chr3:114351685-114454683	0	-	114351685	114351858	789624	4	193,188,101,105,	0,28531,37319,102893,
#Partially deleted in new
chr3	114351810	114367044	chr3:114351810-114367044	0	+	114351810	114351810	8553170	4	146,129,186,78,	0,4242,14885,15156,
#Partially deleted in new
chr3	114351834	114388970	chr3:114351834-114388970	3	+	114351834	114351834	789624	9	122,129,60,160,186,255,43,157,575,	0,4218,5333,7514,14861,15132,23959,35588,36561,
#Partially deleted in new
chr3	114351885	114367096	chr3:114351885-114367096	0	+	114351885	114351885	8553170	5	71,129,60,186,130,	0,4167,5282,14810,15081,
#Partially deleted in new
chr3	114366716	114379178	chr3:114366716-114379178	0	+	114366716	114366716	8553170	4	82,62,43,209,	0,250,9077,12253,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	114380357	114454817	chr3:114380357-114454817	0	-	114380357	114380787	789624	4	47,164,101,239,	0,419,8647,74221,
#Partially deleted in new
chr3	114387274	114500391	chr3:114387274-114500391	0	-	114387274	114387274	8553170	4	290,59,101,40,	0,790,1730,113077,
#Deleted in new
chr3	114387668	114388978	chr3:114387668-114388978	0	+	114387668	114387668	8553170	2	107,583,	0,727,
#Partially deleted in new
chr3	114388065	114861793	chr3:114388065-114861793	0	-	114388065	114388065	8553170	8	80,101,40,153,48,46,74,32,	0,939,112286,194048,305462,322202,413035,473696,
#Partially deleted in new
chr3	114388065	114900622	chr3:114388065-114900622	0	-	114388065	114388065	8553170	8	80,101,40,153,48,74,39,24,	0,939,112286,194048,305462,413035,512238,512533,
#Partially deleted in new
chr3	114389045	115100292	chr3:114389045-115100292	0	-	114389045	114389045	8553170	7	60,40,96,48,74,39,118,	0,111306,210205,304482,412055,511258,711129,
#Partially deleted in new
chr3	114419053	114599303	chr3:114419053-114599303	0	-	114419053	114419053	8553170	5	114,40,67,153,53,	0,81298,83744,163060,180197,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	114445520	114519141	chr3:114445520-114519141	3	+	114445520	114445520	8553170	3	129,64,626,	0,8056,72995,
#Partially deleted in new
chr3	114453592	114520132	chr3:114453592-114520132	1	+	114453592	114453592	789624	3	48,84,490,	0,64923,66050,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	114519665	114529452	chr3:114519665-114529452	0	+	114519665	114519665	8553170	5	65,133,164,65,184,	0,7556,8966,9449,9603,
#Partially deleted in new
chr3	114658340	114713997	chr3:114658340-114713997	0	-	114658340	114658340	8553170	4	519,48,46,22,	0,35187,51927,55635,
#Deleted in new
chr3	114684579	114687609	chr3:114684579-114687609	3	+	114684579	114684579	8553170	2	41,331,	0,2699,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	114687225	115147265	chr3:114687225-115147265	0	-	114687225	114687225	8553170	8	1150,48,46,40,74,39,51,47,	0,6302,23042,26750,113875,213078,287140,459993,
#Deleted in new
chr3	114743444	114743525	chr3:114743444-114743525	3	-	114743444	114743444	5263520	1	81,	0,
#Partially deleted in new
chr3	114791684	114801177	chr3:114791684-114801177	0	-	114791684	114791684	8553170	2	493,77,	0,9416,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	114873113	114876514	chr3:114873113-114876514	3	+	114873113	114873113	789624	3	83,211,170,	0,798,3231,
#Deleted in new
chr3	114930540	114931449	chr3:114930540-114931449	7	+	114930540	114930540	16724991	1	909,	0,
#Partially deleted in new
chr3	114974391	115144909	chr3:114974391-115144909	0	-	114974391	114974391	8553170	3	25,119,97,	0,53064,170421,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	115100422	115103061	chr3:115100422-115103061	3	+	115100422	115100422	789624	2	169,506,	0,2133,
#Partially deleted in new
chr3	115251195	115285347	chr3:115251195-115285347	3	+	115251195	115251195	8553170	5	60,55,137,86,195,	0,868,11598,13079,33957,
#Deleted in new
chr3	115279124	115279860	chr3:115279124-115279860	7	+	115279124	115279124	16724991	1	736,	0,
#Partially deleted in new
chr3	115623323	115721490	chr3:115623323-115721490	3	+	115623689	115720882	789624	3	396,598,697,	0,52689,97470,
#Partially deleted in new
chr3	115623509	115721490	chr3:115623509-115721490	1	+	115663778	115720882	789624	4	210,396,598,697,	0,40011,52503,97284,
#Partially deleted in new
chr3	115658532	115661279	chr3:115658532-115661279	3	+	115658532	115658532	8553170	2	436,126,	0,2621,
#Partially deleted in new
chr3	115802362	116086561	chr3:115802362-116086561	1	-	115810316	116086561	789624	6	8052,149,121,135,126,238,	0,39482,40095,50120,217152,283961,
#Partially deleted in new
chr3	115802387	116445531	chr3:115802387-116445531	3	-	115810316	116445031	789624	7	8027,149,121,135,126,233,655,	0,39457,40070,50095,217127,283936,642489,
#Partially deleted in new
chr3	115809793	116444983	chr3:115809793-116444983	0	-	115810316	116444983	789624	9	621,33,36,149,121,135,126,233,107,	0,6820,24768,32051,32664,42689,209721,276530,635083,
#Partially deleted in new
chr3	115810275	115842497	chr3:115810275-115842497	0	-	115810275	115810275	8553170	6	139,80,33,36,149,40,	0,3883,6338,24286,31569,32182,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	115837869	115838159	chr3:115837869-115838159	3	+	115837869	115837869	8553170	1	290,	0,
#Partially deleted in new
chr3	115841570	115852578	chr3:115841570-115852578	0	-	115841570	115841570	8553170	3	423,121,96,	0,887,10912,
#Partially deleted in new
chr3	115841886	116051252	chr3:115841886-116051252	0	-	115841886	115841886	8553170	5	107,121,135,126,97,	0,571,10596,177628,209269,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	116360023	116370090	chr3:116360023-116370090	3	+	116360023	116360023	789624	4	70,94,129,260,	0,7918,8119,9807,
#Partially deleted in new
chr3	116552472	116568264	chr3:116552472-116568264	3	+	116552472	116552472	8553170	2	48,175,	0,15617,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	116582551	116582830	chr3:116582551-116582830	3	-	116582551	116582551	8553170	1	279,	0,
#Deleted in new
chr3	116645901	116646727	chr3:116645901-116646727	7	-	116645901	116645901	16724991	1	826,	0,
#Deleted in new
chr3	116709234	116712471	chr3:116709234-116712471	0	+	116709234	116709234	8553170	3	826,218,117,	0,969,3120,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	116709405	116717321	chr3:116709405-116717321	3	+	116709405	116709405	8553170	4	1016,153,112,1134,	0,2949,4633,6782,
#Partially deleted in new
chr3	116709758	116716327	chr3:116709758-116716327	0	+	116709758	116709758	8553170	4	118,503,112,140,	0,2596,4280,6429,
#Partially deleted in new
chr3	116709778	116723581	chr3:116709778-116723581	0	+	116709778	116709778	8553170	3	98,158,230,	0,7982,13573,
#Partially deleted in new
chr3	116709832	116716435	chr3:116709832-116716435	0	+	116709832	116709832	8553170	4	44,153,112,248,	0,2522,4206,6355,
#Partially deleted in new
chr3	116709968	116716431	chr3:116709968-116716431	0	+	116709968	116709968	8553170	4	453,245,112,244,	0,2386,4070,6219,
#Partially deleted in new
chr3	116709968	116716431	chr3:116709968-116716431	0	+	116709968	116709968	789624	4	453,503,112,244,	0,2386,4070,6219,
#Deleted in new
chr3	116716459	116716624	chr3:116716459-116716624	3	+	116716459	116716459	8553170	1	165,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	116850276	116850367	chr3:116850276-116850367	3	-	116850276	116850276	5263520	1	91,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	116921327	116921479	chr3:116921327-116921479	3	+	116921327	116921327	8553170	1	152,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	116921430	116932238	chr3:116921430-116932238	3	+	116921430	116921430	789624	2	130,1322,	0,9486,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	116965111	116965227	chr3:116965111-116965227	3	-	116965111	116965111	8553170	1	116,	0,
#Deleted in new
chr3	117026697	117027039	chr3:117026697-117027039	7	+	117026697	117026697	16724991	1	342,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	117544204	117544311	chr3:117544204-117544311	3	+	117544204	117544204	8553170	1	107,	0,
#Partially deleted in new
chr3	117672153	117997592	chr3:117672153-117997592	3	-	117672153	117672153	8553170	2	143,411,	0,325028,
#Deleted in new
chr3	117674341	117675144	chr3:117674341-117675144	7	-	117674341	117674341	16724991	1	803,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	117678692	117690930	chr3:117678692-117690930	3	-	117678692	117678692	789624	4	288,34,121,40,	0,2246,11262,12198,
#Partially deleted in new
chr3	117682913	117688861	chr3:117682913-117688861	0	-	117682913	117682913	8553170	2	86,355,	0,5593,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	117688578	117690932	chr3:117688578-117690932	1	-	117688578	117688578	8553170	3	323,124,42,	0,1376,2312,
#Partially deleted in new
chr3	117790672	117793765	chr3:117790672-117793765	3	+	117790672	117790672	8553170	2	175,335,	0,2758,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	118004818	118557668	chr3:118004818-118557668	3	-	118004818	118004818	8553170	7	132,100,182,141,55,105,72,	0,69705,72539,82541,491804,546001,552778,
#Partially deleted in new
chr3	118508410	118557667	chr3:118508410-118557667	1	-	118508410	118508410	8553170	3	282,105,71,	0,42409,49186,
#Partially deleted in new
chr3	118900556	119146068	chr3:118900556-119146068	3	-	118902519	119105192	789624	8	2405,151,123,156,208,164,62,256,	0,4091,5039,25544,27952,29555,204587,245256,
#Partially deleted in new
chr3	118900626	119034888	chr3:118900626-119034888	1	-	118902519	119034582	789624	7	2335,151,123,156,208,164,358,	0,4021,4969,25474,27882,29485,133904,
#Partially deleted in new
chr3	118900633	119034792	chr3:118900633-119034792	1	-	118902519	119034582	789624	7	2328,151,51,156,208,164,262,	0,4014,5034,25467,27875,29478,133897,
#Partially deleted in new
chr3	118900635	119105221	chr3:118900635-119105221	1	-	118902519	119105192	789624	7	2326,151,123,156,208,164,78,	0,4012,4960,25465,27873,29476,204508,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	118902153	119146035	chr3:118902153-119146035	1	-	118902519	119105192	789624	9	808,151,51,156,208,164,62,129,223,	0,2494,3514,23947,26355,27958,202990,210496,243659,
#Partially deleted in new
chr3	118902390	119034728	chr3:118902390-119034728	1	-	118902519	119034582	789624	7	571,67,123,156,208,164,198,	0,2257,3205,23710,26118,27721,132140,
#Deleted in new
chr3	118925922	118930253	chr3:118925922-118930253	0	-	118925922	118925922	8553170	3	334,208,142,	0,2586,4189,
#Partially deleted in new
chr3	118928657	119034955	chr3:118928657-119034955	0	-	118928657	118930150	789624	4	59,164,90,425,	0,1454,20571,105873,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	118943072	118948241	chr3:118943072-118948241	3	+	118943072	118943072	789624	4	114,129,168,1193,	0,1789,2795,3976,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	118948319	119145993	chr3:118948319-119145993	0	-	118948319	118948319	8553170	5	65,90,62,105,181,	0,909,156824,164354,197493,
#Partially deleted in new
chr3	119146149	119151455	chr3:119146149-119151455	3	+	119146189	119151292	789624	3	1438,144,232,	0,2030,5074,
#Partially deleted in new
chr3	119146150	119160025	chr3:119146150-119160025	0	+	119146189	119151292	789624	4	1437,144,144,133,	0,2029,5076,13742,
#Partially deleted in new
chr3	119146299	119160042	chr3:119146299-119160042	0	+	119146299	119159928	789624	2	1288,150,	0,13593,
#Partially deleted in new
chr3	119146812	119151452	chr3:119146812-119151452	0	+	119146812	119151242	789624	3	775,68,229,	0,1443,4411,
#Partially deleted in new
chr3	119146986	119151313	chr3:119146986-119151313	0	+	119146986	119151292	789624	2	601,87,	0,4240,
#Partially deleted in new
chr3	119147374	119187807	chr3:119147374-119187807	3	+	119147374	119187807	789624	2	213,33,	0,40400,
#Partially deleted in new
chr3	119173516	119204112	chr3:119173516-119204112	1	+	119187945	119203967	789624	7	122,201,75,123,180,84,196,	0,14258,16728,17465,20702,25540,30400,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	119173517	119205153	chr3:119173517-119205153	3	+	119186741	119203967	789624	8	121,97,201,75,123,180,84,1237,	0,13196,14257,16727,17464,20701,25539,30399,
#Partially deleted in new
chr3	119173599	119194258	chr3:119173599-119194258	0	+	119186741	119194258	789624	7	39,112,97,201,75,123,40,	0,2398,13114,14175,16645,17382,20619,
#Partially deleted in new
chr3	119173599	119194318	chr3:119173599-119194318	0	+	119186741	119194318	789624	6	39,132,201,75,123,100,	0,13079,14175,16645,17382,20619,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	119186737	119205141	chr3:119186737-119205141	1	+	119186741	119203967	789624	7	73,201,75,99,180,84,1225,	0,1037,3507,4268,7481,12319,17179,
#Partially deleted in new
chr3	119211731	119240639	chr3:119211731-119240639	1	-	119212548	119230099	789624	8	950,105,123,188,233,398,218,279,	0,4508,6918,12326,15077,18115,25121,28629,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	119211739	119240878	chr3:119211739-119240878	1	-	119216235	119230099	789624	7	4605,123,188,233,398,218,29,	0,6910,12318,15069,18107,25113,29110,
#Partially deleted in new
chr3	119211741	119240946	chr3:119211741-119240946	1	-	119212548	119230099	789624	9	940,105,123,188,233,398,83,218,97,	0,4498,6908,12316,15067,18105,23403,25111,29108,
#Partially deleted in new
chr3	119211741	119241103	chr3:119211741-119241103	3	-	119212548	119230099	789624	8	940,105,123,188,233,398,218,254,	0,4498,6908,12316,15067,18105,25111,29108,
#Partially deleted in new
chr3	119211741	119230053	chr3:119211741-119230053	1	-	119212169	119229958	789624	3	452,53,207,	0,15247,18105,
#Partially deleted in new
chr3	119211778	119237071	chr3:119211778-119237071	0	-	119216338	119230099	789624	7	903,105,61,188,233,398,219,	0,4461,6933,12279,15030,18068,25074,
#Partially deleted in new
chr3	119216238	119240878	chr3:119216238-119240878	0	-	119216238	119216238	8553170	6	106,61,188,233,218,29,	0,2473,7819,10570,20614,24611,
#Partially deleted in new
chr3	119226485	119290666	chr3:119226485-119290666	3	+	119226485	119226485	789624	4	196,213,109,26,	0,3659,8546,64155,
#Partially deleted in new
chr3	119226808	119240878	chr3:119226808-119240878	0	-	119226808	119226883	789624	4	233,83,218,29,	0,8336,10044,14041,
#Partially deleted in new
chr3	119226885	119240878	chr3:119226885-119240878	0	-	119226885	119230099	789624	5	156,398,83,218,29,	0,2961,8259,9967,13964,
#Partially deleted in new
chr3	119226938	119240878	chr3:119226938-119240878	0	-	119226938	119230099	789624	3	103,398,114,	0,2908,13826,
#Partially deleted in new
chr3	119229935	119240878	chr3:119229935-119240878	0	-	119229935	119230099	789624	3	309,218,114,	0,6917,10829,
#Partially deleted in new
chr3	119229974	119240664	chr3:119229974-119240664	0	-	119229974	119230099	789624	3	270,218,100,	0,6878,10590,
#Partially deleted in new
chr3	119230034	119240157	chr3:119230034-119240157	0	-	119230034	119230099	789624	3	210,218,132,	0,6818,9991,
#Partially deleted in new
chr3	119230079	119240907	chr3:119230079-119240907	0	-	119230079	119230099	8553170	4	165,218,170,58,	0,6773,10281,10770,
#Partially deleted in new
chr3	119230091	119240878	chr3:119230091-119240878	0	-	119230091	119230099	8553170	5	153,83,99,218,29,	0,5053,6061,6761,10758,
#Partially deleted in new
chr3	119230115	119240907	chr3:119230115-119240907	0	-	119230115	119230115	8553170	4	129,218,215,58,	0,6737,10200,10734,
#Partially deleted in new
chr3	119230155	119240655	chr3:119230155-119240655	0	-	119230155	119230155	8553170	4	89,83,218,91,	0,4989,6697,10409,
#Partially deleted in new
chr3	119230175	119240907	chr3:119230175-119240907	0	-	119230175	119230175	8553170	5	69,83,218,170,58,	0,4969,6677,10185,10674,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	119232416	119240878	chr3:119232416-119240878	0	-	119232416	119232416	8553170	5	105,147,83,218,29,	0,590,2728,4436,8433,
#Partially deleted in new
chr3	119236214	119240395	chr3:119236214-119240395	0	-	119236214	119236214	8553170	3	37,218,197,	0,638,3984,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	119294372	119420714	chr3:119294372-119420714	3	+	119294904	119416264	789624	12	632,103,145,83,108,143,199,125,63,576,281,6859,	0,70943,73999,86531,87919,88711,96412,99094,104826,107449,115123,119483,
#Deleted in new
chr3	119298664	119299012	chr3:119298664-119299012	7	+	119298664	119298664	16724991	1	348,	0,
#Partially deleted in new
chr3	119314292	119322760	chr3:119314292-119322760	3	-	119314292	119314292	789624	2	477,147,	0,8321,
#Partially deleted in new
chr3	119324891	119383128	chr3:119324891-119383128	0	+	119324945	119383128	789624	6	67,103,145,83,108,45,	0,40424,43480,56012,57400,58192,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	119341833	119341940	chr3:119341833-119341940	3	-	119341833	119341833	8553170	1	107,	0,
#Partially deleted in new
chr3	119429499	119463682	chr3:119429499-119463682	3	-	119431980	119462074	789624	9	2715,121,188,349,155,84,223,187,347,	0,5262,7291,8255,17518,22947,28518,32462,33836,
#Partially deleted in new
chr3	119429499	119463597	chr3:119429499-119463597	0	-	119451296	119462074	789624	10	2715,121,188,349,155,109,84,223,187,262,	0,5262,7291,8255,17518,21709,22947,28518,32462,33836,
#Partially deleted in new
chr3	119429499	119436816	chr3:119429499-119436816	0	-	119435904	119436816	789624	4	2715,121,181,26,	0,5262,6255,7291,
#Deleted in new
chr3	119436588	119437939	chr3:119436588-119437939	0	-	119436588	119436588	8553170	2	390,185,	0,1166,
#Partially deleted in new
chr3	119436943	119463616	chr3:119436943-119463616	0	-	119436943	119462074	789624	4	35,349,187,281,	0,811,25018,26392,
#Partially deleted in new
chr3	119437933	119463581	chr3:119437933-119463581	0	-	119437933	119437933	8553170	4	170,223,187,246,	0,20084,24028,25402,
#Partially deleted in new
chr3	119446641	119462008	chr3:119446641-119462008	0	-	119446641	119446641	8553170	4	531,84,223,47,	0,5805,11376,15320,
#Partially deleted in new
chr3	119447017	119463665	chr3:119447017-119463665	0	-	119447017	119462074	789624	5	155,84,223,143,330,	0,5429,11000,14944,16318,
#Partially deleted in new
chr3	119447018	119463611	chr3:119447018-119463611	0	-	119458156	119462074	789624	5	154,84,167,187,276,	0,5428,10999,14943,16317,
#Partially deleted in new
chr3	119452446	119468830	chr3:119452446-119468830	0	-	119452446	119462074	789624	4	84,223,187,96,	0,5571,9515,16288,
#Partially deleted in new
chr3	119452508	119463614	chr3:119452508-119463614	0	-	119452508	119452508	8553170	4	22,66,187,279,	0,5509,9453,10827,
#Partially deleted in new
chr3	119458017	119463646	chr3:119458017-119463646	0	-	119458017	119462074	789624	4	223,187,137,41,	0,3944,5318,5588,
#Partially deleted in new
chr3	119468937	119494708	chr3:119468937-119494708	3	+	119469021	119492438	0	11	169,91,144,136,122,60,100,59,168,57,2427,	0,882,2371,8375,11113,16390,17895,19991,21613,22580,23344,
#Partially deleted in new
chr3	119468962	119485357	chr3:119468962-119485357	0	+	119468962	119485357	789624	6	44,91,144,136,122,30,	0,857,2346,8350,11088,16365,
#Partially deleted in new
chr3	119468962	119492477	chr3:119468962-119492477	0	+	119469021	119479943	789624	11	144,91,144,136,265,60,100,59,168,57,196,	0,857,2346,8350,10945,16365,17870,19966,21588,22555,23319,
#Partially deleted in new
chr3	119468962	119490667	chr3:119468962-119490667	0	+	119469021	119478441	789624	10	144,91,144,136,141,265,60,204,59,117,	0,857,2346,8350,9371,10945,16365,17870,19966,21588,
#Partially deleted in new
chr3	119468974	119471816	chr3:119468974-119471816	0	+	119468974	119468974	8553170	3	132,91,508,	0,845,2334,
#Partially deleted in new
chr3	119468983	119493825	chr3:119468983-119493825	0	+	119469021	119478441	8553170	12	123,91,144,136,141,265,60,100,59,168,57,1544,	0,836,2325,8329,9350,10924,16344,17849,19945,21567,22534,23298,
#Partially deleted in new
chr3	119468999	119477407	chr3:119468999-119477407	0	+	119469021	119471316	789624	4	259,91,144,95,	0,820,2309,8313,
#Partially deleted in new
chr3	119478122	119479979	chr3:119478122-119479979	0	+	119478122	119478122	8553170	2	352,72,	0,1785,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	119488042	119493146	chr3:119488042-119493146	0	+	119488042	119488042	8553170	3	2676,57,865,	0,3475,4239,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	119497677	119498181	chr3:119497677-119498181	3	-	119497677	119497677	8553170	1	504,	0,
#Partially deleted in new
chr3	119498531	119525090	chr3:119498531-119525090	3	+	119498733	119523756	789624	7	396,166,89,68,79,111,1485,	0,2163,5000,5422,15109,18673,25074,
#Partially deleted in new
chr3	119498546	119523823	chr3:119498546-119523823	1	+	119498733	119523756	789624	3	381,111,218,	0,18658,25059,
#Partially deleted in new
chr3	119498551	119524066	chr3:119498551-119524066	0	+	119498733	119517215	789624	6	376,166,89,68,111,461,	0,2143,4980,5402,18653,25054,
#Partially deleted in new
chr3	119498566	119517315	chr3:119498566-119517315	0	+	119498733	119513662	789624	3	361,79,111,	0,15074,18638,
#Partially deleted in new
chr3	119498574	119523630	chr3:119498574-119523630	0	+	119498733	119503610	789624	6	353,89,68,79,111,25,	0,4957,5379,15066,18630,25031,
#Partially deleted in new
chr3	119498580	119517315	chr3:119498580-119517315	0	+	119498733	119517315	789624	4	347,68,79,111,	0,5373,15060,18624,
#Partially deleted in new
chr3	119498582	119523638	chr3:119498582-119523638	0	+	119498733	119498931	789624	4	360,166,111,33,	0,2112,18622,25023,
#Partially deleted in new
chr3	119498816	119524061	chr3:119498816-119524061	0	+	119498816	119498931	789624	3	117,111,456,	0,18388,24789,
#Partially deleted in new
chr3	119500373	119513719	chr3:119500373-119513719	0	+	119500373	119500373	8553170	3	487,68,79,	0,3580,13267,
#Partially deleted in new
chr3	119524292	119559602	chr3:119524292-119559602	3	-	119527770	119557728	0	7	1457,109,96,282,318,300,163,	0,3440,5549,12844,20257,33336,35147,
#Partially deleted in new
chr3	119527463	119559556	chr3:119527463-119559556	1	-	119527770	119557728	0	6	378,96,282,318,300,117,	0,2378,9673,17086,30165,31976,
#Partially deleted in new
chr3	119527770	119557728	chr3:119527770-119557728	1	-	119527770	119557728	0	4	71,282,318,100,	0,9366,16779,29858,
#Partially deleted in new
chr3	119544342	119557840	chr3:119544342-119557840	0	-	119544342	119544342	8553170	2	525,212,	0,13286,
#Deleted in new
chr3	119579211	119579650	chr3:119579211-119579650	3	-	119579211	119579211	8553170	1	439,	0,
#Partially deleted in new
chr3	119579267	119589945	chr3:119579267-119589945	3	+	119582169	119587878	0	4	1369,334,361,2482,	0,2866,7017,8196,
#Partially deleted in new
chr3	119579432	119586363	chr3:119579432-119586363	0	+	119582169	119586363	789624	4	419,152,334,79,	0,1052,2701,6852,
#Partially deleted in new
chr3	119579463	119588213	chr3:119579463-119588213	0	+	119579463	119579463	8553170	3	388,361,750,	0,6821,8000,
#Partially deleted in new
chr3	119579527	119586539	chr3:119579527-119586539	0	+	119579527	119579527	8553170	2	324,255,	0,6757,
#Partially deleted in new
chr3	119579589	119588007	chr3:119579589-119588007	1	+	119582169	119587878	0	4	262,334,361,544,	0,2544,6695,7874,
#Partially deleted in new
chr3	119579675	119589945	chr3:119579675-119589945	1	+	119582169	119587878	0	5	176,86,334,361,2482,	0,875,2458,6609,7788,
#Partially deleted in new
chr3	119582064	119588064	chr3:119582064-119588064	1	+	119582169	119587878	0	3	403,361,601,	0,4220,5399,
#Partially deleted in new
chr3	119597841	119629811	chr3:119597841-119629811	3	+	119597913	119629468	789624	11	145,202,178,109,102,90,168,90,109,165,428,	0,8932,10928,11626,15175,18170,20177,21721,27282,30859,31542,
#Partially deleted in new
chr3	119597874	119629716	chr3:119597874-119629716	1	+	119609533	119629468	789624	10	112,178,109,102,90,168,90,109,165,333,	0,10895,11593,15142,18137,20144,21688,27249,30826,31509,
#Partially deleted in new
chr3	119597884	119629811	chr3:119597884-119629811	1	+	119597913	119629468	789624	11	102,202,130,109,102,90,168,90,109,165,428,	0,8889,10885,11583,15132,18127,20134,21678,27239,30816,31499,
#Partially deleted in new
chr3	119598584	119607097	chr3:119598584-119607097	0	+	119598584	119598584	8553170	2	42,324,	0,8189,
#Partially deleted in new
chr3	119600270	119629811	chr3:119600270-119629811	1	+	119600379	119629468	789624	11	134,202,178,109,102,90,168,90,109,165,428,	0,6503,8499,9197,12746,15741,17748,19292,24853,28430,29113,
#Partially deleted in new
chr3	119608896	119620193	chr3:119608896-119620193	0	+	119608896	119620140	789624	7	51,109,102,90,168,90,118,	0,571,4120,7115,9122,10666,11179,
#Deleted in new
chr3	119635525	119636150	chr3:119635525-119636150	7	-	119635525	119635525	16724991	1	625,	0,
#Partially deleted in new
chr3	119636456	119642552	chr3:119636456-119642552	0	-	119642475	119642552	789624	2	60,187,	0,5909,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	119642057	119660644	chr3:119642057-119660644	0	-	119648161	119660423	789624	5	504,83,550,109,712,	0,1309,6061,12447,17875,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	119642058	119660590	chr3:119642058-119660590	3	-	119642475	119660423	789624	4	503,409,109,658,	0,6201,12446,17874,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	119642058	119665324	chr3:119642058-119665324	0	-	119642058	119642058	8553170	6	503,83,409,109,131,74,	0,1308,6201,12446,17874,23192,
#Partially deleted in new
chr3	119642334	119660883	chr3:119642334-119660883	1	-	119648161	119660423	789624	4	227,550,109,951,	0,5784,12170,17598,
#Partially deleted in new
chr3	119642475	119660590	chr3:119642475-119660590	1	-	119643375	119660423	789624	5	86,83,409,109,658,	0,891,5784,12029,17457,
#Partially deleted in new
chr3	119648377	119660587	chr3:119648377-119660587	0	-	119648377	119648377	8553170	2	291,655,	0,11555,
#Partially deleted in new
chr3	119648399	119654727	chr3:119648399-119654727	0	-	119648399	119648399	8553170	2	269,223,	0,6105,
#Partially deleted in new
chr3	119648440	119660585	chr3:119648440-119660585	0	-	119648440	119648440	8553170	4	228,109,131,66,	0,6064,11492,12079,
#Partially deleted in new
chr3	119654512	119676922	chr3:119654512-119676922	0	-	119676785	119676922	789624	4	101,131,89,192,	0,5420,20632,22218,
#Partially deleted in new
chr3	119660094	119677454	chr3:119660094-119677454	0	-	119675148	119677310	0	4	151,64,89,251,	0,6824,15050,17109,
#Partially deleted in new
chr3	119669270	119677403	chr3:119669270-119677403	3	-	119675148	119677310	0	3	395,89,200,	0,5874,7933,
#Partially deleted in new
chr3	119669531	119677346	chr3:119669531-119677346	1	-	119675148	119677310	789624	4	134,89,105,143,	0,5613,7330,7672,
#Partially deleted in new
chr3	119669533	119675577	chr3:119669533-119675577	0	-	119669533	119669533	8553170	2	132,433,	0,5611,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	119674378	119677364	chr3:119674378-119677364	1	-	119675148	119677310	0	3	410,89,161,	0,766,2825,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr3	119703021	119767102	chr3:119703021-119767102	3	+	119703098	119751097	789624	18	201,77,158,84,57,182,178,158,183,143,117,72,147,222,149,92,162,2051,	0,3787,4382,5569,6817,12540,23149,27198,29272,30342,34344,36233,37527,40953,44093,44789,47915,62030,
#Partially deleted in new
chr3	119703021	119740803	chr3:119703021-119740803	0	+	119703021	119703021	8553170	13	201,77,158,84,57,182,178,158,183,143,117,72,255,	0,3787,4382,5569,6817,12540,23149,27198,29272,30342,34344,36233,37527,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	119703021	119767102	chr3:119703021-119767102	0	+	119703098	119707423	789624	17	201,158,84,57,182,178,158,183,143,117,72,147,222,149,92,162,2051,	0,4382,5569,6817,12540,23149,27198,29272,30342,34344,36233,37527,40953,44093,44789,47915,62030,
#Partially deleted in new
chr3	119703032	119715934	chr3:119703032-119715934	1	+	119703098	119715778	789624	6	190,77,158,84,57,373,	0,3776,4371,5558,6806,12529,
#Partially deleted in new
chr3	119703035	119765346	chr3:119703035-119765346	0	+	119703098	119703266	789624	18	236,77,158,84,57,182,178,158,183,143,117,72,147,222,149,92,162,295,	0,3773,4368,5555,6803,12526,23135,27184,29258,30328,34330,36219,37513,40939,44079,44775,47901,62016,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	119703043	119710361	chr3:119703043-119710361	0	+	119703043	119703043	8553170	5	179,77,158,84,523,	0,3765,4360,5547,6795,
#Partially deleted in new
chr3	119703043	119707104	chr3:119703043-119707104	0	+	119703043	119703043	8553170	2	179,296,	0,3765,
#Partially deleted in new
chr3	119703050	119765286	chr3:119703050-119765286	0	+	119703098	119715692	789624	16	172,84,57,182,178,158,183,143,117,72,147,222,149,92,162,235,	0,5540,6788,12511,23120,27169,29243,30313,34315,36204,37498,40924,44064,44760,47886,62001,
#Partially deleted in new
chr3	119703075	119807570	chr3:119703075-119807570	3	+	119703098	119751097	8553170	18	147,77,158,84,57,182,178,158,183,143,117,72,147,222,149,92,162,342,	0,3733,4328,5515,6763,12486,23095,27144,29218,30288,34290,36179,37473,40899,44039,44735,47861,104153,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	119705972	119740803	chr3:119705972-119740803	0	+	119705972	119705972	8553170	12	1589,84,57,122,182,178,158,183,143,117,72,255,	0,2618,3866,7168,9589,20198,24247,26321,27391,31393,33282,34576,
#Partially deleted in new
chr3	119707508	119726348	chr3:119707508-119726348	0	+	119707508	119715692	789624	5	53,65,57,182,178,	0,1101,2330,8053,18662,
#Partially deleted in new
chr3	119733368	119739380	chr3:119733368-119739380	0	+	119733368	119733368	8553170	3	138,117,126,	0,3997,5886,
#Partially deleted in new
chr3	119744138	119750350	chr3:119744138-119750350	3	-	119744138	119744138	8553170	3	28,93,145,	0,4959,6067,
#Partially deleted in new
chr3	119747629	119765276	chr3:119747629-119765276	0	+	119747629	119747629	8553170	4	75,92,162,225,	0,181,3307,17422,
#Partially deleted in new
chr3	119750442	119765241	chr3:119750442-119765241	0	+	119750442	119750442	8553170	4	26,162,76,190,	0,494,1858,14609,
#Partially deleted in new
chr3	119750457	119765696	chr3:119750457-119765696	0	+	119750457	119750457	8553170	3	142,162,645,	0,479,14594,
#Partially deleted in new
chr3	119750463	119765240	chr3:119750463-119765240	0	+	119750463	119750463	8553170	4	136,162,76,189,	0,473,1837,14588,
#Partially deleted in new
chr3	119750472	119765586	chr3:119750472-119765586	0	+	119750472	119750472	8553170	3	148,162,535,	0,464,14579,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	119780483	119818485	chr3:119780483-119818485	1	+	119807250	119817212	789624	9	1817,219,134,188,275,143,117,106,1418,	0,26745,29577,31055,32202,34495,34839,35242,36584,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	119780483	119818485	chr3:119780483-119818485	1	+	119807250	119817212	789624	9	1817,219,134,188,164,143,117,106,1418,	0,26745,29577,31055,32313,34495,34839,35242,36584,
#Partially deleted in new
chr3	119782034	119810552	chr3:119782034-119810552	0	+	119782034	119782034	8553170	3	266,219,492,	0,25194,28026,
#Partially deleted in new
chr3	119782709	119818485	chr3:119782709-119818485	3	+	119782757	119817212	0	9	143,219,134,188,275,143,117,106,1418,	0,24519,27351,28829,29976,32269,32613,33016,34358,
#Partially deleted in new
chr3	119791828	119792553	chr3:119791828-119792553	7	+	119791828	119791828	16724991	1	725,	0,
#Partially deleted in new
chr3	119807250	119817212	chr3:119807250-119817212	1	+	119807250	119817212	0	8	197,134,188,164,143,117,106,145,	0,2810,4288,5546,7728,8072,8475,9817,
#Partially deleted in new
chr3	119807250	119817212	chr3:119807250-119817212	1	+	119807250	119817212	0	8	197,134,188,275,143,117,106,145,	0,2810,4288,5435,7728,8072,8475,9817,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	119811075	119818484	chr3:119811075-119818484	0	+	119811075	119811075	8553170	6	651,275,143,117,106,1417,	0,1610,3903,4247,4650,5992,
#Partially deleted in new
chr3	119821322	120094417	chr3:119821322-120094417	1	-	119826787	120093434	0	11	5533,99,187,96,98,107,131,111,84,194,1071,	0,21932,42096,55090,84432,91381,94721,102050,125945,180723,272024,
#Partially deleted in new
chr3	119826685	120093666	chr3:119826685-120093666	3	-	119826787	120093434	0	12	170,99,187,39,96,98,107,131,111,84,194,320,	0,16569,36733,39904,49727,79069,86018,89358,96687,120582,175360,266661,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	119826692	119843609	chr3:119826692-119843609	0	-	119826692	119826692	8553170	2	163,355,	0,16562,
#Partially deleted in new
chr3	119826700	119876508	chr3:119826700-119876508	0	-	119826700	119826700	8553170	3	155,187,96,	0,36718,49712,
#Partially deleted in new
chr3	119826706	120093897	chr3:119826706-120093897	1	-	119826787	120093434	8553170	12	149,150,99,187,96,98,107,131,111,84,194,551,	0,4395,16548,36712,49706,79048,85997,89337,96666,120561,175339,266640,
#Deleted in new
chr3	120028739	120029868	chr3:120028739-120029868	7	+	120028739	120028739	16724991	1	1129,	0,
#Partially deleted in new
chr3	120041189	120041537	chr3:120041189-120041537	7	+	120041189	120041189	16724991	1	348,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	120094894	120136783	chr3:120094894-120136783	3	+	120094894	120094894	8553170	6	148,118,79,70,98,456,	0,1171,3819,9881,38680,41433,
#Partially deleted in new
chr3	120095269	120099186	chr3:120095269-120099186	1	+	120095269	120095269	8553170	2	509,473,	0,3444,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	120095629	120098787	chr3:120095629-120098787	0	+	120095629	120095629	8553170	2	149,396,	0,2762,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	120110497	120110786	chr3:120110497-120110786	3	-	120110497	120110497	8553170	1	289,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	120121908	120122206	chr3:120121908-120122206	3	+	120121908	120121908	8553170	1	298,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	120164644	120244120	chr3:120164644-120244120	0	-	120173466	120244098	789624	4	3740,159,137,118,	0,8667,78995,79358,
#Partially deleted in new
chr3	120165480	120244295	chr3:120165480-120244295	1	-	120167031	120244098	789624	9	2904,159,237,96,126,111,130,137,293,	0,7831,15644,19818,21177,27458,27814,78159,78522,
#Partially deleted in new
chr3	120165480	120285094	chr3:120165480-120285094	3	-	120167031	120244098	789624	10	2904,159,237,96,126,111,130,137,476,66,	0,7831,15644,19818,21177,27458,27814,78159,78522,119548,
#Partially deleted in new
chr3	120166957	120244116	chr3:120166957-120244116	1	-	120167031	120244098	789624	9	1427,159,237,96,114,111,130,137,114,	0,6354,14167,18341,19712,25981,26337,76682,77045,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	120210319	120210421	chr3:120210319-120210421	3	+	120210319	120210319	8553170	1	102,	0,
#Partially deleted in new
chr3	120242859	120285074	chr3:120242859-120285074	0	-	120242859	120242859	8553170	3	917,476,46,	0,1143,42169,
#Deleted in new
chr3	120306725	120307952	chr3:120306725-120307952	7	+	120306725	120306725	16724991	1	1227,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	120324508	120349339	chr3:120324508-120349339	3	-	120331199	120349243	789624	4	6900,278,129,596,	0,10353,11316,24235,
#Partially deleted in new
chr3	120349448	120369790	chr3:120349448-120369790	5	+	120349448	120349448	16724991	3	280,396,1990,	0,17011,18352,
#Partially deleted in new
chr3	120349715	120419686	chr3:120349715-120419686	6	+	120349715	120349715	16724991	5	13,334,285,138,621,	0,16806,18085,66085,69350,
#Partially deleted in new
chr3	120357127	120367874	chr3:120357127-120367874	5	+	120357127	120357127	16724991	5	7,125,47,405,74,	0,626,5123,9323,10673,
#Deleted in new
chr3	120365992	120368326	chr3:120365992-120368326	3	-	120365992	120365992	8553170	3	228,148,449,	0,403,1885,
#Partially deleted in new
chr3	120367948	120423826	chr3:120367948-120423826	5	+	120367948	120367948	16724991	3	137,138,652,	0,47852,55226,
#Partially deleted in new
chr3	120388028	120389315	chr3:120388028-120389315	7	+	120388028	120388028	16724991	2	157,151,	0,1136,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	120392292	120451253	chr3:120392292-120451253	3	-	120396951	120450746	789624	11	4704,77,111,113,119,131,33,130,105,63,357,	0,7590,10515,10949,12560,17239,18659,19561,23630,58391,58604,
#Deleted in new
chr3	120395667	120395729	chr3:120395667-120395729	3	-	120395667	120395667	5263520	1	62,	0,
#Partially deleted in new
chr3	120396222	120403297	chr3:120396222-120403297	0	-	120396968	120403297	789624	2	751,56,	0,7019,
#Partially deleted in new
chr3	120396472	120450991	chr3:120396472-120450991	1	-	120396951	120450746	789624	10	524,77,111,113,119,131,33,130,63,95,	0,3410,6335,6769,8380,13059,14479,15381,54211,54424,
#Partially deleted in new
chr3	120396890	120400089	chr3:120396890-120400089	0	-	120396890	120396890	8553170	2	106,207,	0,2992,
#Partially deleted in new
chr3	120404894	120411326	chr3:120404894-120411326	0	-	120404894	120404894	8553170	3	77,131,375,	0,4637,6057,
#Partially deleted in new
chr3	120409574	120450991	chr3:120409574-120450991	0	-	120409574	120450746	789624	6	88,33,130,105,114,95,	0,1377,2279,6348,41109,41322,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	120409956	120450993	chr3:120409956-120450993	0	-	120409956	120409956	8553170	5	1028,130,105,63,97,	0,1897,5966,40727,40940,
#Partially deleted in new
chr3	120421171	120450992	chr3:120421171-120450992	0	-	120421171	120421171	8553170	3	381,63,96,	0,29512,29725,
#Partially deleted in new
chr3	120423526	120450960	chr3:120423526-120450960	0	-	120423526	120423526	8553170	3	550,63,64,	0,27157,27370,
#Partially deleted in new
chr3	120438260	120450980	chr3:120438260-120450980	0	-	120438260	120438260	8553170	4	198,137,63,84,	0,3007,12423,12636,
#Deleted in new
chr3	120484170	120484527	chr3:120484170-120484527	7	-	120484170	120484170	16724991	1	357,	0,
#Deleted in new
chr3	120512849	120513188	chr3:120512849-120513188	7	+	120512849	120512849	16724991	1	339,	0,
#Partially deleted in new
chr3	120596308	120602500	chr3:120596308-120602500	3	+	120596359	120602270	0	3	231,147,293,	0,4802,5899,
#Partially deleted in new
chr3	120596327	120602324	chr3:120596327-120602324	1	+	120596359	120601293	0	2	212,1214,	0,4783,
#Partially deleted in new
chr3	120596346	120602323	chr3:120596346-120602323	1	+	120596359	120602270	789624	2	193,116,	0,5861,
#Partially deleted in new
chr3	120596354	120601639	chr3:120596354-120601639	0	+	120596359	120596569	789624	2	292,529,	0,4756,
#Partially deleted in new
chr3	120596356	120602328	chr3:120596356-120602328	0	+	120596359	120596569	789624	3	290,147,121,	0,4754,5851,
#Deleted in new
chr3	120600949	120602324	chr3:120600949-120602324	0	+	120600949	120600949	8553170	2	308,117,	0,1258,
#Partially deleted in new
chr3	120628172	120682571	chr3:120628172-120682571	3	-	120628379	120682111	0	14	357,182,127,105,125,100,80,35,92,60,106,89,72,475,	0,4974,10282,13416,16146,18094,18800,19704,22601,24419,42254,46728,47619,53924,
#Partially deleted in new
chr3	120628365	120650838	chr3:120628365-120650838	0	-	120633316	120650838	789624	6	164,182,105,80,35,65,	0,4781,13223,18607,19511,22408,
#Partially deleted in new
chr3	120633146	120641807	chr3:120633146-120641807	0	-	120633146	120633146	8553170	3	182,127,219,	0,5308,8442,
#Partially deleted in new
chr3	120633332	120647052	chr3:120633332-120647052	0	-	120641629	120647052	789624	5	258,105,22,100,80,	0,8256,11265,12934,13640,
#Partially deleted in new
chr3	120633333	120646335	chr3:120633333-120646335	0	-	120633579	120646335	789624	5	257,127,105,125,69,	0,5121,8255,10985,12933,
#Partially deleted in new
chr3	120646972	120682113	chr3:120646972-120682113	0	-	120646972	120675844	789624	7	80,35,92,60,106,72,17,	0,904,3801,5619,23454,28819,35124,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	120650787	120682131	chr3:120650787-120682131	0	-	120650787	120650787	8553170	7	78,60,106,89,72,88,35,	0,1804,19639,24113,25004,27116,31309,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	120652614	120682243	chr3:120652614-120682243	0	-	120652614	120652614	8553170	6	32,106,89,72,126,147,	0,17812,22286,23177,25289,29482,
#Partially deleted in new
chr3	120670290	120682137	chr3:120670290-120682137	0	-	120670290	120670290	8553170	4	242,89,72,41,	0,4610,5501,11806,
#Partially deleted in new
chr3	120674578	120682269	chr3:120674578-120682269	0	-	120674578	120674578	8553170	3	411,72,173,	0,1213,7518,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	120686680	120742537	chr3:120686680-120742537	3	-	120689822	120742507	789624	8	3208,39,72,151,115,130,92,76,	0,3768,7472,11742,19319,23099,44015,55781,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	120686700	120742516	chr3:120686700-120742516	0	-	120686700	120686700	789624	9	3188,39,72,151,115,130,92,118,55,	0,3748,7452,11722,19299,23079,43995,51849,55761,
#Partially deleted in new
chr3	120688596	120742993	chr3:120688596-120742993	0	-	120698513	120742507	789624	8	1292,39,72,98,115,130,92,532,	0,1852,5556,9826,17403,21183,42099,53865,
#Partially deleted in new
chr3	120688695	120742514	chr3:120688695-120742514	0	-	120706090	120742507	789624	7	1193,39,72,151,115,92,53,	0,1753,5457,9727,17304,42000,53766,
#Partially deleted in new
chr3	120689417	120742505	chr3:120689417-120742505	0	-	120706090	120742505	789624	6	471,39,72,115,92,44,	0,1031,4735,16582,41278,53044,
#Partially deleted in new
chr3	120689546	120742510	chr3:120689546-120742510	0	-	120694199	120742507	789624	7	342,39,72,115,130,92,49,	0,902,4606,16453,20233,41149,52915,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	120689693	120742533	chr3:120689693-120742533	0	-	120689693	120689693	8553170	9	195,39,72,151,115,130,92,141,72,	0,755,4459,8729,16306,20086,41002,48833,52768,
#Partially deleted in new
chr3	120689714	120742520	chr3:120689714-120742520	1	-	120689822	120742507	789624	7	174,39,151,115,130,92,59,	0,734,8708,16285,20065,40981,52747,
#Partially deleted in new
chr3	120694152	120710546	chr3:120694152-120710546	0	-	120694152	120694152	8553170	5	72,151,115,130,204,	0,4270,11847,15627,16190,
#Partially deleted in new
chr3	120722023	120722311	chr3:120722023-120722311	7	+	120722023	120722023	16724991	1	288,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	120722457	120722646	chr3:120722457-120722646	7	+	120722457	120722457	16724991	1	189,	0,
#Partially deleted in new
chr3	120742636	120750700	chr3:120742636-120750700	0	+	120750552	120750700	789624	3	158,207,178,	0,7108,7886,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	120742731	120783069	chr3:120742731-120783069	3	+	120750552	120781470	0	5	63,478,202,242,2027,	0,7791,27996,33691,38311,
#Partially deleted in new
chr3	120742731	120776660	chr3:120742731-120776660	0	+	120770780	120776660	789624	3	63,202,238,	0,27996,33691,
#Partially deleted in new
chr3	120742743	120750918	chr3:120742743-120750918	0	+	120750552	120750918	789624	3	51,104,396,	0,7104,7779,
#Partially deleted in new
chr3	120742761	120751056	chr3:120742761-120751056	0	+	120742761	120742761	8553170	2	33,534,	0,7761,
#Deleted in new
chr3	120805865	120806745	chr3:120805865-120806745	7	+	120805865	120805865	16724991	1	880,	0,
#Partially deleted in new
chr3	120833439	120836360	chr3:120833439-120836360	3	-	120833439	120833439	789624	2	655,92,	0,2829,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr3	120908071	121424761	chr3:120908071-121424761	3	+	120909578	121419097	789624	28	263,197,98,82,101,135,64,84,124,79,155,73,148,68,41,218,173,126,152,72,66,171,240,361,166,112,221,5706,	0,1499,46868,133628,137363,206853,213569,244405,249432,297851,314931,325544,330899,332368,342651,346823,349089,350971,371733,374194,410403,470644,473221,499171,505086,507785,510265,510984,
#Partially deleted in new
chr3	120908204	121419283	chr3:120908204-121419283	1	+	120909578	121419097	789624	27	130,197,98,82,101,135,64,84,124,79,155,73,148,68,41,218,173,126,152,66,171,240,361,166,112,221,228,	0,1366,46735,133495,137230,206720,213436,244272,249299,297718,314798,325411,330766,332235,342518,346690,348956,350838,371600,410270,470511,473088,499038,504953,507652,510132,510851,
#Partially deleted in new
chr3	120908235	121158968	chr3:120908235-121158968	0	+	120909578	120954979	789624	9	99,197,94,82,101,135,64,84,1465,	0,1335,46708,133464,137199,206689,213405,244241,249268,
#Partially deleted in new
chr3	120908288	121407668	chr3:120908288-121407668	1	+	120909578	121407664	789624	23	46,197,98,82,101,135,64,84,124,79,155,73,148,68,41,218,173,126,152,66,171,240,426,	0,1282,46651,133411,137146,206636,213352,244188,249215,297634,314714,325327,330682,332151,342434,346606,348872,350754,371516,410186,470427,473004,498954,
#Partially deleted in new
chr3	120908313	121407668	chr3:120908313-121407668	1	+	120909578	121407664	789624	24	21,197,98,82,101,135,64,84,124,79,155,73,148,68,41,218,173,126,152,72,66,171,240,426,	0,1257,46626,133386,137121,206611,213327,244163,249190,297609,314689,325302,330657,332126,342409,346581,348847,350729,371491,373952,410161,470402,472979,498929,
#Partially deleted in new
chr3	120908313	121407668	chr3:120908313-121407668	1	+	120909578	121407664	789624	24	21,197,98,82,101,135,64,84,124,79,155,73,148,68,41,218,173,126,152,72,66,93,240,426,	0,1257,46626,133386,137121,206611,213327,244163,249190,297609,314689,325302,330657,332126,342409,346581,348847,350729,371491,373952,410161,416179,472979,498929,
#Partially deleted in new
chr3	120909101	121045446	chr3:120909101-121045446	0	+	120909578	121045446	789624	5	90,197,98,82,12,	0,469,45838,132598,136333,
#Partially deleted in new
chr3	120909570	121419095	chr3:120909570-121419095	0	+	120909578	121419095	789624	26	197,98,82,101,135,64,84,124,79,155,73,148,68,41,218,173,126,152,72,66,240,361,166,112,221,40,	0,45369,132129,135864,205354,212070,242906,247933,296352,313432,324045,329400,330869,341152,345324,347590,349472,370234,372695,408904,471722,497672,503587,506286,508766,509485,
#Partially deleted in new
chr3	120924611	120925158	chr3:120924611-120925158	7	-	120924611	120924611	16724991	2	51,150,	0,397,
#Deleted in new
chr3	121049639	121049715	chr3:121049639-121049715	3	+	121049639	121049639	789624	1	76,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	121099107	121099774	chr3:121099107-121099774	7	+	121099107	121099107	16724991	1	667,	0,
#Deleted in new
chr3	121356990	121357940	chr3:121356990-121357940	7	+	121356990	121356990	16724991	1	950,	0,
#Partially deleted in new
chr3	121431426	121546641	chr3:121431426-121546641	1	-	121432303	121546641	789624	31	991,116,154,125,112,185,122,127,175,138,194,241,197,144,3107,244,125,194,143,205,143,213,149,152,220,109,157,131,180,271,291,	0,1491,4695,8565,17888,28623,36092,36878,40563,41923,45113,50145,51959,53614,55875,62051,65381,67050,78134,78612,80460,88444,90576,98214,101563,105673,108006,109922,113300,114288,114924,
#Partially deleted in new
chr3	121431430	121546006	chr3:121431430-121546006	3	-	121432303	121545877	0	30	987,116,154,125,112,185,122,127,175,138,194,241,197,144,3107,244,125,194,143,205,143,213,147,148,220,109,157,131,180,292,	0,1487,4691,8561,17884,28619,36088,36874,40559,41919,45109,50141,51955,53610,55871,62047,65377,67046,78130,78608,80456,88440,90572,98214,101559,105669,108002,109918,113296,114284,
#Partially deleted in new
chr3	121440083	121481596	chr3:121440083-121481596	0	-	121440083	121440083	8553170	6	33,112,122,127,194,25,	0,9231,27435,28221,36456,41488,
#Deleted in new
chr3	121494109	121494908	chr3:121494109-121494908	7	+	121494109	121494109	16724991	1	799,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	121521570	121533210	chr3:121521570-121533210	0	-	121521570	121521570	8553170	4	323,147,148,221,	0,432,8074,11419,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	121593118	121630295	chr3:121593118-121630295	3	+	121620575	121626910	789624	4	384,33,1911,3601,	0,27427,28314,33576,
#Partially deleted in new
chr3	121631398	121660911	chr3:121631398-121660911	3	-	121631845	121658347	789624	14	584,84,232,105,212,70,56,111,55,111,130,74,84,92,	0,702,933,1668,2808,4336,5035,5747,11528,13419,15920,25880,26865,29421,
#Partially deleted in new
chr3	121631399	121644183	chr3:121631399-121644183	0	-	121631399	121631399	8553170	9	583,84,232,105,212,70,56,111,1257,	0,701,932,1667,2807,4335,5034,5746,11527,
#Partially deleted in new
chr3	121631714	121660898	chr3:121631714-121660898	1	-	121631845	121658347	789624	13	268,84,232,105,212,70,56,55,111,130,74,84,79,	0,386,617,1352,2492,4020,4719,11212,13103,15604,25564,26549,29105,
#Partially deleted in new
chr3	121632405	121660927	chr3:121632405-121660927	0	-	121635740	121658347	789624	11	158,105,212,70,56,111,111,130,74,84,108,	0,661,1801,3329,4028,4740,12412,14913,24873,25858,28414,
#Partially deleted in new
chr3	121637145	121660883	chr3:121637145-121660883	0	-	121644911	121658347	789624	7	111,55,111,53,74,84,64,	0,5781,7672,10173,20133,21118,23674,
#Partially deleted in new
chr3	121644120	121660898	chr3:121644120-121660898	0	-	121644120	121644120	8553170	6	600,111,130,74,84,79,	0,697,3198,13158,14143,16699,
#Partially deleted in new
chr3	121644229	121660901	chr3:121644229-121660901	0	-	121644229	121644229	8553170	5	699,130,74,84,82,	0,3089,13049,14034,16590,
#Partially deleted in new
chr3	121644817	121660919	chr3:121644817-121660919	0	-	121647409	121658347	789624	5	111,164,74,84,100,	0,2501,12461,13446,16002,
#Partially deleted in new
chr3	121653564	121660916	chr3:121653564-121660916	0	-	121653564	121653564	8553170	4	329,74,84,97,	0,3714,4699,7255,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	121653993	121654296	chr3:121653993-121654296	3	-	121653993	121653993	8553170	1	303,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	121655474	121655604	chr3:121655474-121655604	3	-	121655474	121655474	8553170	1	130,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	121656058	121660878	chr3:121656058-121660878	0	-	121656058	121656058	8553170	4	208,151,84,59,	0,1143,2205,4761,
#Partially deleted in new
chr3	121656890	121660919	chr3:121656890-121660919	0	-	121656890	121656890	8553170	3	462,84,100,	0,1373,3929,
#Partially deleted in new
chr3	121657981	121660903	chr3:121657981-121660903	0	-	121657981	121657981	8553170	2	366,84,	0,2838,
#Partially deleted in new
chr3	121663198	121749755	chr3:121663198-121749755	1	-	121664479	121730971	789624	22	1416,106,135,98,144,138,166,179,1912,5189,74,115,116,403,114,108,117,129,153,153,98,124,	0,1727,4277,4862,6013,13694,14086,18488,27471,30542,36613,39282,51662,53538,55189,56447,59063,63714,65989,66666,67677,86433,
#Partially deleted in new
chr3	121663202	121749740	chr3:121663202-121749740	1	-	121664479	121730971	789624	22	1412,106,135,98,159,138,166,179,1912,5189,74,115,116,403,114,123,117,129,153,153,98,109,	0,1723,4273,4858,5994,13690,14082,18484,27467,30538,36609,39278,51658,53534,55185,56443,59059,63710,65985,66662,67673,86429,
#Partially deleted in new
chr3	121663202	121749767	chr3:121663202-121749767	3	-	121664479	121729996	789624	21	1412,106,135,98,144,138,166,179,1912,5189,74,115,116,403,114,117,129,153,153,126,136,	0,1723,4273,4858,6009,13690,14082,18484,27467,30538,36609,39278,51658,53534,55185,59059,63710,65985,66662,67645,86429,
#Partially deleted in new
chr3	121664100	121749722	chr3:121664100-121749722	0	-	121730851	121730971	789624	22	514,106,135,98,144,138,166,179,1912,5189,74,115,116,403,114,123,117,129,153,153,126,91,	0,825,3375,3960,5111,12792,13184,17586,26569,29640,35711,38380,50760,52636,54287,55545,58161,62812,65087,65764,66747,85531,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	121664529	121677030	chr3:121664529-121677030	0	-	121668460	121677030	789624	7	85,106,135,98,195,144,138,	0,396,2946,3531,3784,4682,12363,
#Partially deleted in new
chr3	121695477	121749666	chr3:121695477-121749666	0	-	121695477	121730971	789624	12	3452,74,115,116,403,114,117,129,153,153,98,35,	0,4334,7003,19383,21259,22910,26784,31435,33710,34387,35398,54154,
#Partially deleted in new
chr3	121697026	121729950	chr3:121697026-121729950	0	-	121697026	121729950	789624	9	1903,74,115,116,403,114,129,153,86,	0,2785,5454,17834,19710,21361,29886,32161,32838,
#Partially deleted in new
chr3	121729127	121730216	chr3:121729127-121730216	0	-	121729127	121729127	8553170	2	213,352,	0,737,
#Partially deleted in new
chr3	121729989	121749163	chr3:121729989-121749163	0	-	121729989	121730971	789624	3	28,98,154,	0,886,19020,
#Partially deleted in new
chr3	121769762	121835079	chr3:121769762-121835079	3	-	121770344	121828960	789624	15	812,157,132,149,143,110,110,179,100,94,130,163,112,89,114,	0,2794,11980,18521,20310,25694,27355,29433,37581,39153,56288,58707,59098,64628,65203,
#Partially deleted in new
chr3	121769993	121835034	chr3:121769993-121835034	1	-	121770344	121828960	789624	12	581,157,132,149,143,100,94,130,163,112,89,69,	0,2563,11749,18290,20079,37350,38922,56057,58476,58867,64397,64972,
#Partially deleted in new
chr3	121769993	121835079	chr3:121769993-121835079	0	-	121790179	121828960	789624	14	581,157,132,149,143,110,179,100,94,130,163,112,89,114,	0,2563,11749,18290,20079,27124,29202,37350,38922,56057,58476,58867,64397,64972,
#Partially deleted in new
chr3	121795460	121835033	chr3:121795460-121835033	0	-	121795460	121807378	789624	9	106,110,179,100,94,130,112,89,68,	0,1657,3735,11883,13455,30590,33400,38930,39505,
#Partially deleted in new
chr3	121797187	121835016	chr3:121797187-121835016	0	-	121797187	121807378	789624	7	40,179,100,130,112,89,51,	0,2008,10156,28863,31673,37203,37778,
#Partially deleted in new
chr3	121828469	121835061	chr3:121828469-121835061	0	-	121828469	121828960	789624	4	163,112,231,96,	0,391,5779,6496,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	121833935	121834992	chr3:121833935-121834992	0	-	121833935	121833935	8553170	2	544,27,	0,1030,
#Partially deleted in new
chr3	121835182	121886468	chr3:121835182-121886468	0	+	121835285	121857016	789624	5	209,95,146,252,127,	0,9270,21828,37354,51159,
#Deleted in new
chr3	121835208	121837776	chr3:121835208-121837776	0	+	121835208	121835208	8553170	4	183,68,150,353,	0,980,1436,2215,
#Partially deleted in new
chr3	121835214	121886526	chr3:121835214-121886526	3	+	121835285	121886388	789624	6	177,95,137,146,252,185,	0,9238,19472,21796,37322,51127,
#Partially deleted in new
chr3	121835236	121873163	chr3:121835236-121873163	1	+	121835285	121873044	789624	6	155,95,137,146,252,175,	0,9216,19450,21774,37300,37752,
#Partially deleted in new
chr3	121835276	121857156	chr3:121835276-121857156	0	+	121835285	121836646	789624	5	115,150,95,137,146,	0,1368,9176,19410,21734,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr3	121894088	121944102	chr3:121894088-121944102	3	+	121894476	121941007	789624	22	493,88,142,93,100,91,78,83,87,90,45,33,89,82,135,165,47,111,97,147,105,3272,	0,2317,3299,17485,18932,21138,21527,28131,28686,28951,29133,30262,30856,33669,34332,34893,35213,36751,37550,45260,46295,46742,
#Partially deleted in new
chr3	121894439	121941252	chr3:121894439-121941252	1	+	121894476	121941007	789624	21	142,88,142,100,91,78,83,87,90,45,33,89,82,135,165,47,111,97,147,105,422,	0,1966,2948,18581,20787,21176,27780,28335,28600,28782,29911,30505,33318,33981,34542,34862,36400,37199,44909,45944,46391,
#Partially deleted in new
chr3	121895338	121915639	chr3:121895338-121915639	0	+	121896486	121915639	789624	7	34,88,142,93,100,91,24,	0,1067,2049,16235,17682,19888,20277,
#Partially deleted in new
chr3	121914924	121923130	chr3:121914924-121923130	0	+	121914924	121914924	8553170	6	116,91,78,83,87,91,	0,302,691,7295,7850,8115,
#Deleted in new
chr3	121927658	121928538	chr3:121927658-121928538	0	+	121927658	121927658	8553170	2	181,118,	0,762,
#Deleted in new
chr3	121928291	121930949	chr3:121928291-121930949	0	+	121928291	121928291	8553170	4	264,165,47,110,	0,690,1010,2548,
#Partially deleted in new
chr3	121939190	121940982	chr3:121939190-121940982	0	+	121939190	121939190	8553170	3	305,105,152,	0,1193,1640,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	121987322	122022183	chr3:121987322-122022183	3	-	121988366	122022077	789624	7	1086,821,147,120,150,171,164,	0,5827,13985,14422,17921,19668,34697,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	121987322	122022247	chr3:121987322-122022247	1	-	121988366	122022077	789624	8	1086,821,132,147,120,150,171,228,	0,5827,6859,13985,14422,17921,19668,34697,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	121987322	122022258	chr3:121987322-122022258	1	-	121988366	122022077	789624	8	1086,821,132,147,120,150,171,239,	0,5827,6859,13985,14422,17921,19668,34697,
#Partially deleted in new
chr3	121988329	122022122	chr3:121988329-122022122	1	-	121988366	122022077	789624	6	79,821,132,150,171,103,	0,4820,5852,16914,18661,33690,
#Partially deleted in new
chr3	121988345	122007301	chr3:121988345-122007301	0	-	121988345	121988345	8553170	6	63,821,147,120,150,311,	0,4804,12962,13399,16898,18645,
#Partially deleted in new
chr3	121988405	122022198	chr3:121988405-122022198	0	-	121993931	122022077	789624	8	3,802,132,147,120,150,171,179,	0,4744,5776,12902,13339,16838,18585,33614,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	122025194	122025304	chr3:122025194-122025304	3	-	122025194	122025194	8553170	1	110,	0,
#Partially deleted in new
chr3	122055365	122120074	chr3:122055365-122120074	1	+	122103693	122119534	0	6	138,336,303,144,46,637,	0,48146,50832,53899,62682,64072,
#Partially deleted in new
chr3	122055365	122120328	chr3:122055365-122120328	1	+	122055489	122119534	0	6	138,50,303,144,46,891,	0,36235,50832,53899,62682,64072,
#Partially deleted in new
chr3	122055373	122121136	chr3:122055373-122121136	3	+	122055489	122119534	0	7	130,50,336,303,144,46,1699,	0,36227,48138,50824,53891,62674,64064,
#Partially deleted in new
chr3	122055376	122092162	chr3:122055376-122092162	0	+	122055376	122055376	8553170	2	127,562,	0,36224,
#Partially deleted in new
chr3	122077843	122103657	chr3:122077843-122103657	0	+	122077843	122077843	8553170	3	202,135,146,	0,13757,25668,
#Partially deleted in new
chr3	122077848	122121139	chr3:122077848-122121139	1	+	122091604	122119534	0	6	197,50,336,303,46,1702,	0,13752,25663,28349,40199,41589,
#Partially deleted in new
chr3	122077856	122106318	chr3:122077856-122106318	0	+	122091604	122106318	789624	4	60,50,336,121,	0,13744,25655,28341,
#Partially deleted in new
chr3	122077902	122119820	chr3:122077902-122119820	1	+	122091604	122119534	0	7	143,50,336,303,144,46,383,	0,13698,25609,28295,31362,40145,41535,
#Partially deleted in new
chr3	122091600	122119593	chr3:122091600-122119593	0	+	122091600	122119534	789624	5	50,336,303,46,156,	0,11911,14597,26447,27837,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	122183682	122291629	chr3:122183682-122291629	3	+	122254189	122285191	0	7	130,427,307,885,231,124,7943,	0,70265,73398,77845,92129,98430,100004,
#Partially deleted in new
chr3	122184232	122286503	chr3:122184232-122286503	1	+	122254189	122285191	0	7	297,427,307,885,231,124,2817,	0,69715,72848,77295,91579,97880,99454,
#Partially deleted in new
chr3	122184333	122286495	chr3:122184333-122286495	1	+	122254189	122285191	0	7	196,427,307,885,231,154,2809,	0,69614,72747,77194,91478,97749,99353,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	122184431	122247757	chr3:122184431-122247757	0	+	122184431	122184431	8553170	3	98,68,1312,	0,60946,62014,
#Partially deleted in new
chr3	122253947	122285958	chr3:122253947-122285958	1	+	122254189	122285191	789624	5	427,307,885,124,2272,	0,3133,7580,28165,29739,
#Partially deleted in new
chr3	122254270	122257638	chr3:122254270-122257638	0	+	122254270	122254270	8553170	2	104,558,	0,2810,
#Deleted in new
chr3	122317608	122318741	chr3:122317608-122318741	7	+	122317608	122317608	16724991	1	1133,	0,
#Partially deleted in new
chr3	122325243	122341972	chr3:122325243-122341972	3	+	122325292	122341567	0	3	115,102,534,	0,12303,16195,
#Partially deleted in new
chr3	122325261	122338270	chr3:122325261-122338270	1	+	122325292	122337672	789624	2	97,724,	0,12285,
#Partially deleted in new
chr3	122359590	122383231	chr3:122359590-122383231	3	-	122359868	122383224	789624	5	329,60,147,126,58,	0,3377,8585,12084,23583,
#Partially deleted in new
chr3	122359599	122383231	chr3:122359599-122383231	1	-	122359868	122383224	789624	3	320,60,58,	0,3368,23574,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	122359628	122366762	chr3:122359628-122366762	0	-	122359628	122359628	8553170	5	199,60,131,69,310,	0,3339,5707,5936,6824,
#Partially deleted in new
chr3	122359645	122365574	chr3:122359645-122365574	0	-	122359645	122359645	8553170	3	274,60,239,	0,3322,5690,
#Partially deleted in new
chr3	122359787	122383227	chr3:122359787-122383227	1	-	122359868	122383156	789624	5	132,60,147,126,80,	0,3180,8388,11887,23360,
#Partially deleted in new
chr3	122359861	122373022	chr3:122359861-122373022	0	-	122359868	122373022	789624	5	58,60,147,126,40,	0,3106,8314,11813,13121,
#Partially deleted in new
chr3	122367823	122383231	chr3:122367823-122383231	0	-	122367823	122367823	8553170	3	499,126,58,	0,3851,15350,
#Partially deleted in new
chr3	122384175	122409917	chr3:122384175-122409917	1	+	122401531	122409831	789624	6	124,160,123,106,109,179,	0,17200,18584,20082,23105,25563,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	122384181	122412334	chr3:122384181-122412334	3	+	122384265	122409831	789624	5	118,123,106,109,2596,	0,18578,20076,23099,25557,
#Partially deleted in new
chr3	122384197	122407964	chr3:122384197-122407964	1	+	122384265	122407443	789624	4	102,123,106,684,	0,18562,20060,23083,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	122412331	122416051	chr3:122412331-122416051	3	-	122414535	122415528	789624	1	3720,	0,
#Partially deleted in new
chr3	122416206	122427240	chr3:122416206-122427240	1	+	122416206	122416206	8553170	2	44,1108,	0,9926,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	122416206	122443180	chr3:122416206-122443180	3	+	122416206	122416206	789624	3	44,55,454,	0,16260,26520,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	122416218	122433262	chr3:122416218-122433262	1	+	122416218	122416218	8553170	3	32,55,477,	0,16248,16567,
#Partially deleted in new
chr3	122416224	122426344	chr3:122416224-122426344	1	+	122416224	122416224	8553170	3	26,52,497,	0,9382,9623,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	122416224	122421404	chr3:122416224-122421404	0	+	122416224	122416224	8553170	2	26,416,	0,4764,
#Deleted in new
chr3	122416881	122417012	chr3:122416881-122417012	7	-	122416881	122416881	16724991	1	131,	0,
#Partially deleted in new
chr3	122421948	122514928	chr3:122421948-122514928	3	-	122426984	122496565	0	14	5224,179,128,126,79,164,100,89,132,95,100,108,134,172,	0,5589,11712,15221,20089,27625,29585,30027,31921,39275,41993,45373,74488,92808,
#Partially deleted in new
chr3	122425679	122459885	chr3:122425679-122459885	0	-	122425679	122425679	8553170	11	1493,179,128,126,79,164,100,89,132,123,447,	0,1858,7981,11490,16358,23894,25854,26296,28190,32046,33759,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	122426103	122460657	chr3:122426103-122460657	0	-	122426103	122426103	8553170	12	1069,179,128,126,79,164,100,89,132,123,243,884,	0,1434,7557,11066,15934,23470,25430,25872,27766,31622,33335,33670,
#Partially deleted in new
chr3	122426953	122496637	chr3:122426953-122496637	0	-	122457731	122496565	789624	14	219,179,128,126,79,164,100,89,132,123,95,100,108,201,	0,584,6707,10216,15084,22620,24580,25022,26916,30772,34270,36988,40368,69483,
#Partially deleted in new
chr3	122426984	122514934	chr3:122426984-122514934	0	-	122457731	122496565	789624	15	188,179,128,126,79,164,100,89,132,123,95,100,108,134,178,	0,553,6676,10185,15053,22589,24549,24991,26885,30741,34239,36957,40337,69452,87772,
#Partially deleted in new
chr3	122442047	122514945	chr3:122442047-122514945	0	-	122442047	122496565	789624	10	69,164,100,89,132,95,100,108,134,71,	0,7526,9486,9928,11822,19176,21894,25274,54389,72827,
#Partially deleted in new
chr3	122451584	122464259	chr3:122451584-122464259	0	-	122451584	122451584	8553170	6	49,89,132,95,100,117,	0,391,2285,9639,12357,12558,
#Partially deleted in new
chr3	122451984	122514542	chr3:122451984-122514542	0	-	122451984	122496565	789624	7	80,132,95,100,108,134,78,	0,1885,9239,11957,15337,44452,62480,
#Partially deleted in new
chr3	122451989	122514937	chr3:122451989-122514937	0	-	122451989	122496565	789624	6	75,95,100,108,134,63,	0,9234,11952,15332,44447,62885,
#Partially deleted in new
chr3	122453909	122514906	chr3:122453909-122514906	0	-	122453909	122496565	789624	6	92,95,100,108,134,67,	0,7314,10032,13412,42527,60930,
#Partially deleted in new
chr3	122482989	122483229	chr3:122482989-122483229	7	+	122482989	122482989	16724991	1	240,	0,
#Partially deleted in new
chr3	122527923	122564577	chr3:122527923-122564577	1	-	122528363	122559620	0	11	820,175,140,381,58,219,222,836,34,104,139,	0,8244,9010,12548,17508,22660,24494,27362,30510,31682,36515,
#Partially deleted in new
chr3	122527958	122564577	chr3:122527958-122564577	3	-	122528363	122559620	0	11	785,175,140,381,58,219,222,836,139,104,139,	0,8209,8975,12513,17473,22625,24459,27327,30370,31647,36480,
#Partially deleted in new
chr3	122527958	122564253	chr3:122527958-122564253	1	-	122528363	122559620	789624	9	785,175,140,381,58,17,34,104,143,	0,8209,8975,12513,17473,22625,30475,31647,36152,
#Partially deleted in new
chr3	122527960	122546003	chr3:122527960-122546003	0	-	122527960	122527960	8553170	4	783,906,381,572,	0,8207,12511,17471,
#Partially deleted in new
chr3	122528004	122564242	chr3:122528004-122564242	1	-	122528363	122559620	0	11	739,175,140,381,58,219,222,836,34,104,132,	0,8163,8929,12467,17427,22579,24413,27281,30429,31601,36106,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	122531772	122564315	chr3:122531772-122564315	1	-	122536114	122559620	0	10	4570,140,381,58,219,222,836,34,104,205,	0,5161,8699,13659,18811,20645,23513,26661,27833,32338,
#Partially deleted in new
chr3	122555863	122564242	chr3:122555863-122564242	0	-	122555863	122559620	789624	4	258,73,104,132,	0,2465,3742,8247,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	122564237	122575203	chr3:122564237-122575203	3	+	122564426	122571747	0	5	376,212,1536,218,3526,	0,1621,4251,6217,7440,
#Partially deleted in new
chr3	122564426	122571747	chr3:122564426-122571747	1	+	122564426	122571747	0	4	187,212,218,70,	0,1432,6028,7251,
#Partially deleted in new
chr3	122577601	122636153	chr3:122577601-122636153	3	+	122577667	122636100	0	12	252,120,237,228,79,150,63,168,207,134,175,343,	0,28334,32892,35439,38177,39413,42179,43842,49225,54484,57418,58209,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	122577627	122639047	chr3:122577627-122639047	1	+	122577667	122636100	789624	9	226,120,237,79,63,168,134,175,3237,	0,28308,32866,39458,42153,43816,54458,57392,58183,
#Partially deleted in new
chr3	122594523	122636039	chr3:122594523-122636039	0	+	122594523	122594523	8553170	14	38,124,120,237,228,35,79,150,63,168,207,134,175,229,	0,223,11412,15970,18517,20762,21255,22491,25257,26920,32303,37562,40496,41287,
#Partially deleted in new
chr3	122615614	122636188	chr3:122615614-122636188	1	+	122615709	122636100	0	8	243,150,63,168,207,134,175,378,	0,1400,4166,5829,11212,16471,19405,20196,
#Partially deleted in new
chr3	122615614	122636188	chr3:122615614-122636188	1	+	122615709	122636100	789624	7	243,150,63,168,134,175,378,	0,1400,4166,5829,16471,19405,20196,
#Partially deleted in new
chr3	122621347	122632173	chr3:122621347-122632173	0	+	122621347	122621347	8553170	3	264,207,88,	0,5479,10738,
#Partially deleted in new
chr3	122660612	122662438	chr3:122660612-122662438	7	+	122660612	122660612	16724991	1	1826,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	122680617	122730840	chr3:122680617-122730840	3	+	122680883	122728597	0	17	453,134,34,243,237,2246,237,222,79,150,63,168,207,600,134,175,2533,	0,4567,6462,11683,14808,18772,23124,23909,27572,32806,33254,33644,37453,37741,39637,47194,47690,
#Partially deleted in new
chr3	122680858	122695626	chr3:122680858-122695626	0	+	122680883	122695626	789624	4	212,134,34,201,	0,4326,6221,14567,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	122680860	122730825	chr3:122680860-122730825	0	+	122680883	122703785	8553170	16	210,134,34,243,237,237,222,79,150,63,168,207,600,134,175,2518,	0,4324,6219,11440,14565,22881,23666,27329,32563,33011,33401,37210,37498,39394,46951,47447,
#Partially deleted in new
chr3	122686758	122692339	chr3:122686758-122692339	0	+	122686758	122686758	8553170	2	355,39,	0,5542,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	122692422	122730840	chr3:122692422-122730840	0	+	122692422	122720490	789624	14	121,237,2246,237,222,79,150,63,168,207,600,1399,175,2533,	0,3003,6967,11319,12104,15767,21001,21449,21839,25648,25936,27832,35389,35885,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	122700525	122722647	chr3:122700525-122722647	0	+	122700525	122700525	8553170	10	1110,237,222,79,150,63,168,207,600,2393,	0,3216,4001,7664,12898,13346,13736,17545,17833,19729,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	122718383	122720968	chr3:122718383-122720968	0	+	122718383	122718383	8553170	3	575,134,141,	0,1871,2444,
#Partially deleted in new
chr3	122740002	122793824	chr3:122740002-122793824	3	-	122740344	122793680	789624	8	873,111,84,172,137,182,186,208,	0,1000,12588,15257,19221,28698,37718,53614,
#Partially deleted in new
chr3	122740002	122741776	chr3:122740002-122741776	0	-	122740002	122740002	8553170	2	873,774,	0,1000,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	122752860	122793714	chr3:122752860-122793714	0	-	122752860	122752860	8553170	6	2211,172,137,182,186,98,	0,2399,6363,15840,24860,40756,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	122755323	122793759	chr3:122755323-122793759	0	-	122755323	122755323	8553170	6	108,82,137,182,186,143,	0,3448,3900,13377,22397,38293,
#Partially deleted in new
chr3	122759219	122793660	chr3:122759219-122793660	0	-	122759219	122759219	8553170	5	141,182,186,82,44,	0,9481,18501,27189,34397,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	122761533	122768742	chr3:122761533-122768742	0	-	122761533	122761533	8553170	2	439,42,	0,7167,
#Partially deleted in new
chr3	122794794	122881139	chr3:122794794-122881139	3	+	122795192	122879378	789624	9	741,94,266,130,109,68,128,183,1877,	0,12062,32005,38522,50968,61512,65280,77620,84468,
#Partially deleted in new
chr3	122795083	122879748	chr3:122795083-122879748	0	+	122795192	122826804	789624	8	452,266,130,109,68,128,183,486,	0,31716,38233,50679,61223,64991,77331,84179,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	122886940	122892416	chr3:122886940-122892416	3	+	122886940	122886940	5263520	1	5476,	0,
#Partially deleted in new
chr3	122909081	123027878	chr3:122909081-123027878	3	-	122910142	122948659	8553170	22	1220,206,45,150,171,219,226,145,144,182,118,208,208,136,286,214,99,63,46,100,204,415,	0,1758,2409,2838,3090,3761,4117,4455,4776,6358,6691,12833,13158,14535,17310,18708,19435,19914,30343,34354,39424,118382,
#Partially deleted in new
chr3	122909192	123027812	chr3:122909192-123027812	1	-	122910142	122948659	789624	22	1109,206,45,150,63,219,226,148,144,182,118,208,208,136,286,214,99,63,46,100,204,349,	0,1647,2298,2727,2979,3650,4006,4341,4665,6247,6580,12722,13047,14424,17199,18597,19324,19803,30232,34243,39313,118271,
#Partially deleted in new
chr3	122909192	122976134	chr3:122909192-122976134	1	-	122910142	122976123	789624	23	1109,206,45,150,171,219,226,148,144,182,118,208,208,136,286,214,99,63,46,100,204,162,135,	0,1647,2298,2727,2979,3650,4006,4341,4665,6247,6580,12722,13047,14424,17199,18597,19324,19803,30232,34243,39313,51947,66807,
#Partially deleted in new
chr3	122909192	122993273	chr3:122909192-122993273	1	-	122910142	122961263	789624	23	1109,206,45,150,171,219,226,148,144,182,118,208,208,136,286,214,99,63,46,100,204,162,489,	0,1647,2298,2727,2979,3650,4006,4341,4665,6247,6580,12722,13047,14424,17199,18597,19324,19803,30232,34243,39313,51947,83592,
#Partially deleted in new
chr3	122909193	123027812	chr3:122909193-123027812	1	-	122910142	122961263	789624	23	1108,206,45,150,171,219,226,148,144,182,118,208,208,136,286,214,99,63,46,100,204,162,349,	0,1646,2297,2726,2978,3649,4005,4340,4664,6246,6579,12721,13046,14423,17198,18596,19323,19802,30231,34242,39312,51946,118270,
#Partially deleted in new
chr3	122909193	122912267	chr3:122909193-122912267	0	-	122910142	122912267	789624	5	1108,206,45,150,33,	0,1646,2297,2726,3041,
#Partially deleted in new
chr3	122909193	123028605	chr3:122909193-123028605	0	-	122910982	122961263	789624	23	1108,206,176,150,171,219,226,148,144,182,118,208,208,136,286,214,99,63,46,100,204,162,159,	0,1646,2166,2726,2978,3649,4005,4340,4664,6246,6579,12721,13046,14423,17198,18596,19323,19802,30231,34242,39312,51946,119253,
#Partially deleted in new
chr3	122909209	122993238	chr3:122909209-122993238	1	-	122910142	122948659	8553170	22	1092,206,45,150,171,219,226,148,144,182,118,208,208,136,286,214,171,63,46,100,204,454,	0,1630,2281,2710,2962,3633,3989,4324,4648,6230,6563,12705,13030,14407,17182,18580,19307,19786,30215,34226,39296,83575,
#Partially deleted in new
chr3	122910872	122993273	chr3:122910872-122993273	0	-	122910872	122961263	789624	22	173,45,150,171,219,226,148,144,182,118,208,208,136,286,214,99,63,46,100,204,162,489,	0,618,1047,1299,1970,2326,2661,2985,4567,4900,11042,11367,12744,15519,16917,17644,18123,28552,32563,37633,50267,81912,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	122924342	123027711	chr3:122924342-123027711	0	-	122924342	122924342	8553170	8	2335,214,99,63,46,100,204,248,	0,3447,4174,4653,15082,19093,24163,103121,
#Partially deleted in new
chr3	122943436	123027578	chr3:122943436-123027578	0	-	122943436	122961263	789624	5	99,204,162,136,115,	0,5069,17703,83661,84027,
#Partially deleted in new
chr3	122943495	122976134	chr3:122943495-122976134	0	-	122943495	122943495	8553170	4	40,204,162,135,	0,5010,17644,32504,
#Partially deleted in new
chr3	122948551	123027578	chr3:122948551-123027578	0	-	122948551	122948551	8553170	4	158,108,162,115,	0,9661,12588,78912,
#Partially deleted in new
chr3	122948581	122975370	chr3:122948581-122975370	0	-	122948581	122961263	789624	3	128,162,268,	0,12558,26521,
#Partially deleted in new
chr3	123067061	123162104	chr3:123067061-123162104	0	+	123067164	123145537	0	16	145,127,88,84,46,93,61,68,92,72,71,142,131,71,135,225,	0,22106,25293,35349,35689,39687,43882,49169,57004,57210,78460,79056,83172,87909,94259,94818,
#Partially deleted in new
chr3	123067069	123162104	chr3:123067069-123162104	3	+	123067164	123161960	0	17	137,127,88,84,46,93,61,68,92,72,137,71,161,131,71,135,225,	0,22098,25285,35341,35681,39679,43874,49161,56996,57202,63410,78452,79029,83164,87901,94251,94810,
#Partially deleted in new
chr3	123067347	123106842	chr3:123067347-123106842	0	+	123102441	123106842	789624	6	228,127,88,84,46,94,	0,21820,25007,35063,35403,39401,
#Partially deleted in new
chr3	123089106	123111007	chr3:123089106-123111007	0	+	123089106	123089106	8553170	6	188,88,84,46,93,64,	0,3248,13304,13644,17642,21837,
#Partially deleted in new
chr3	123124065	123146258	chr3:123124065-123146258	0	+	123124065	123124065	8553170	4	92,72,71,160,	0,206,21456,22033,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	123144506	123162103	chr3:123144506-123162103	0	+	123144506	123144506	8553170	5	1086,161,131,71,783,	0,1592,5727,10464,16814,
#Partially deleted in new
chr3	123150338	123225227	chr3:123150338-123225227	0	+	123150338	123209216	789624	6	26,71,135,201,164,125,	0,4632,10982,58860,73220,74764,
#Deleted in new
chr3	123161793	123161879	chr3:123161793-123161879	3	+	123161793	123161793	5263520	1	86,	0,
#Partially deleted in new
chr3	123201926	123243950	chr3:123201926-123243950	0	+	123201926	123201926	8553170	5	60,201,164,195,139,	0,7272,21632,23176,41885,
#Partially deleted in new
chr3	123201928	123245930	chr3:123201928-123245930	0	+	123209217	123223677	789624	5	58,201,79,195,32,	0,7270,21715,23174,43970,
#Partially deleted in new
chr3	123201957	123271722	chr3:123201957-123271722	3	+	123209217	123271722	789624	7	29,201,164,195,116,66,201,	0,7241,21601,23145,43941,57566,69564,
#Partially deleted in new
chr3	123201958	123271664	chr3:123201958-123271664	0	+	123209217	123271664	789624	8	28,98,201,164,195,116,66,143,	0,2757,7240,21600,23144,43940,57565,69563,
#Partially deleted in new
chr3	123201968	123271909	chr3:123201968-123271909	1	+	123209217	123271573	789624	4	18,201,66,388,	0,7230,57555,69553,
#Partially deleted in new
chr3	123202005	123223702	chr3:123202005-123223702	0	+	123209217	123223702	789624	4	129,98,201,144,	0,2710,7193,21553,
#Partially deleted in new
chr3	123202018	123225171	chr3:123202018-123225171	0	+	123209217	123225171	789624	4	116,201,164,69,	0,7180,21540,23084,
#Partially deleted in new
chr3	123202019	123223680	chr3:123202019-123223680	0	+	123209217	123223680	789624	3	159,201,122,	0,7179,21539,
#Partially deleted in new
chr3	123202050	123246011	chr3:123202050-123246011	0	+	123209217	123246011	789624	6	128,69,201,164,195,113,	0,2665,7148,21508,23052,43848,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	123208321	123274130	chr3:123208321-123274130	1	+	123209217	123271722	789624	6	1078,164,195,116,66,2609,	0,15237,16781,37577,51202,63200,
#Deleted in new
chr3	123277352	123277904	chr3:123277352-123277904	3	+	123277352	123277352	8553170	1	552,	0,
#Partially deleted in new
chr3	123282295	123449758	chr3:123282295-123449758	3	-	123284607	123448545	789624	21	2441,125,205,264,133,30,176,165,117,88,98,145,23,141,142,159,128,112,122,150,2347,	0,4389,7454,8817,13788,15057,17824,20759,21771,31939,35724,37378,38453,43026,45322,46348,48593,50268,65486,70136,165116,
#Deleted in new
chr3	123283592	123283983	chr3:123283592-123283983	3	+	123283592	123283592	8553170	1	391,	0,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr3	123283943	123419209	chr3:123283943-123419209	1	-	123284607	123367937	789624	23	793,125,205,264,133,75,30,176,165,117,88,98,145,23,141,142,159,128,112,122,150,142,429,	0,2741,5806,7169,12140,13036,13409,16176,19111,20123,30291,34076,35730,36805,41378,43674,44700,46945,48620,63838,68488,83961,134837,
#Deleted in new
chr3	123284445	123287111	chr3:123284445-123287111	0	-	123284445	123284445	8553170	2	291,427,	0,2239,
#Partially deleted in new
chr3	123284577	123416342	chr3:123284577-123416342	1	-	123284607	123416267	789624	21	159,125,205,264,133,30,176,165,117,88,98,145,23,141,142,159,128,112,122,150,159,	0,2107,5172,6535,11506,12775,15542,18477,19489,29657,33442,35096,36171,40744,43040,44066,46311,47986,63204,67854,131606,
#Partially deleted in new
chr3	123297256	123304079	chr3:123297256-123304079	0	-	123297256	123297256	8553170	4	126,176,165,13,	0,2863,5798,6810,
#Partially deleted in new
chr3	123300219	123404561	chr3:123300219-123404561	0	-	123300219	123347864	789624	15	76,165,117,88,98,145,23,141,142,159,128,112,122,150,123,	0,2835,3847,14015,17800,19454,20529,25102,27398,28424,30669,32344,47562,52212,104219,
#Partially deleted in new
chr3	123300250	123318152	chr3:123300250-123318152	0	-	123300250	123300250	8553170	5	45,165,117,88,133,	0,2804,3816,13984,17769,
#Partially deleted in new
chr3	123330939	123420274	chr3:123330939-123420274	0	-	123330939	123347864	789624	5	77,112,122,150,116,	0,1624,16842,21492,89219,
#Partially deleted in new
chr3	123332594	123404283	chr3:123332594-123404283	0	-	123347854	123367937	789624	5	81,122,150,147,80,	0,15187,19837,35305,71609,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	123352449	123419209	chr3:123352449-123419209	0	-	123352449	123352449	8553170	2	132,429,	0,66331,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	123490819	123494830	chr3:123490819-123494830	0	-	123490819	123490819	8553170	2	365,38,	0,3973,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	123491553	123585185	chr3:123491553-123585185	3	-	123494887	123585027	789624	7	3417,179,122,89,19,118,313,	0,8961,11006,36832,76208,90658,93319,
#Deleted in new
chr3	123499290	123500693	chr3:123499290-123500693	0	-	123499635	123500693	789624	2	350,179,	0,1224,
#Partially deleted in new
chr3	123499582	123502906	chr3:123499582-123502906	0	-	123499582	123499582	8553170	3	48,179,347,	0,932,2977,
#Partially deleted in new
chr3	123500567	123584555	chr3:123500567-123584555	0	-	123500567	123528433	789624	6	126,122,51,19,118,154,	0,1992,27818,67194,81644,83834,
#Partially deleted in new
chr3	123585541	123644568	chr3:123585541-123644568	3	+	123585541	123585541	8553170	4	260,188,74,65,	0,43952,44954,58962,
#Partially deleted in new
chr3	123585555	123629822	chr3:123585555-123629822	0	+	123585555	123585555	8553170	2	239,329,	0,43938,
#Partially deleted in new
chr3	123585555	123630821	chr3:123585555-123630821	1	+	123585555	123585555	789624	3	246,188,326,	0,43938,44940,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr3	123610048	123884331	chr3:123610048-123884331	3	-	123614104	123793841	0	34	4301,132,130,124,124,218,204,94,33,303,154,128,51,87,117,986,72,250,198,138,153,135,207,536,19,166,166,49,208,168,123,68,59,126,	0,8590,10158,16769,28022,30238,37175,38922,39113,47077,54056,56170,57088,72175,82686,89971,91389,97705,98649,99707,112079,115895,122847,123638,125349,127329,128848,129904,142282,183628,221499,225819,266510,274157,
#Partially deleted in new
chr3	123612297	123876618	chr3:123612297-123876618	1	-	123614104	123793841	0	32	2052,132,130,124,153,124,218,204,94,33,303,154,128,51,87,117,986,72,250,198,138,153,135,536,19,166,166,49,208,168,123,60,	0,6341,7909,14520,17176,25773,27989,34926,36673,36864,44828,51807,53921,54839,69926,80437,87722,89140,95456,96400,97458,109830,113646,121389,123100,125080,126599,127655,140033,181379,219250,264261,
#Partially deleted in new
chr3	123612297	123876618	chr3:123612297-123876618	1	-	123614104	123793841	0	32	2052,132,130,124,124,218,204,94,33,303,154,128,51,87,117,986,72,250,198,138,153,135,207,536,19,166,166,49,208,168,123,60,	0,6341,7909,14520,25773,27989,34926,36673,36864,44828,51807,53921,54839,69926,80437,87722,89140,95456,96400,97458,109830,113646,120598,121389,123100,125080,126599,127655,140033,181379,219250,264261,
#Partially deleted in new
chr3	123612297	123876618	chr3:123612297-123876618	1	-	123614104	123793841	0	33	2052,132,130,124,153,124,218,204,94,33,303,154,128,51,87,117,986,72,250,198,138,153,135,207,536,19,166,166,49,208,168,123,60,	0,6341,7909,14520,17176,25773,27989,34926,36673,36864,44828,51807,53921,54839,69926,80437,87722,89140,95456,96400,97458,109830,113646,120598,121389,123100,125080,126599,127655,140033,181379,219250,264261,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	123612309	123625316	chr3:123612309-123625316	1	-	123614104	123620294	0	3	2040,132,5110,	0,6329,7897,
#Partially deleted in new
chr3	123613339	123620514	chr3:123613339-123620514	1	-	123614104	123620294	0	3	1010,129,308,	0,5299,6867,
#Partially deleted in new
chr3	123614028	123884308	chr3:123614028-123884308	0	-	123739953	123793841	789624	33	321,132,130,124,153,124,218,204,94,33,303,154,128,51,87,117,986,72,250,198,138,153,135,207,536,19,166,166,49,168,123,59,103,	0,4610,6178,12789,15445,24042,26258,33195,34942,35133,43097,50076,52190,53108,68195,78706,85991,87409,93725,94669,95727,108099,111915,118867,119658,121369,123349,124868,125924,179648,217519,262530,270177,
#Partially deleted in new
chr3	123614044	123884314	chr3:123614044-123884314	1	-	123614104	123793841	0	33	305,132,130,124,153,124,218,204,94,33,303,154,128,51,87,117,986,72,250,198,138,153,135,536,19,166,166,49,208,168,123,59,109,	0,4594,6162,12773,15429,24026,26242,33179,34926,35117,43081,50060,52174,53092,68179,78690,85975,87393,93709,94653,95711,108083,111899,119642,121353,123333,124852,125908,138286,179632,217503,262514,270161,
#Partially deleted in new
chr3	123614063	123620626	chr3:123614063-123620626	1	-	123614104	123620294	0	4	286,132,130,130,	0,4575,6143,6433,
#Partially deleted in new
chr3	123614104	123793841	chr3:123614104-123793841	1	-	123614104	123793841	0	31	245,132,130,124,153,124,218,204,94,33,303,154,128,51,87,117,986,72,250,198,138,153,135,207,536,19,166,166,49,208,165,	0,4534,6102,12713,15369,23966,26182,33119,34866,35057,43021,50000,52114,53032,68119,78630,85915,87333,93649,94593,95651,108023,111839,118791,119582,121293,123273,124792,125848,138226,179572,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	123616351	123624078	chr3:123616351-123624078	0	-	123616351	123616351	8553170	2	2419,3872,	0,3855,
#Partially deleted in new
chr3	123640378	123649064	chr3:123640378-123649064	0	-	123640378	123640378	8553170	2	126,94,	0,8592,
#Partially deleted in new
chr3	123646959	123649194	chr3:123646959-123649194	0	-	123646959	123646959	8553170	3	468,94,33,	0,2011,2202,
#Partially deleted in new
chr3	123657125	123692379	chr3:123657125-123692379	0	-	123657125	123682275	789624	6	303,154,128,51,87,97,	0,6979,9093,10011,25098,35157,
#Partially deleted in new
chr3	123666242	123698974	chr3:123666242-123698974	0	-	123666242	123666242	8553170	5	104,51,87,117,166,	0,894,15981,26492,32566,
#Partially deleted in new
chr3	123666918	123682310	chr3:123666918-123682310	0	-	123666918	123666918	8553170	2	269,87,	0,15305,
#Partially deleted in new
chr3	123681029	123701457	chr3:123681029-123701457	0	-	123681029	123681029	8553170	4	1281,117,986,20,	0,11705,18990,20408,
#Partially deleted in new
chr3	123689643	123692407	chr3:123689643-123692407	3	+	123689643	123689643	789624	3	73,258,169,	0,1933,2595,
#Partially deleted in new
chr3	123691249	123692407	chr3:123691249-123692407	1	+	123691249	123691249	8553170	2	585,169,	0,989,
#Deleted in new
chr3	123692734	123693615	chr3:123692734-123693615	0	-	123692734	123692734	8553170	2	117,117,	0,764,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	123709157	123735770	chr3:123709157-123735770	0	-	123709157	123709157	8553170	4	736,153,135,2084,	0,12970,16786,24529,
#Deleted in new
chr3	123715850	123716399	chr3:123715850-123716399	3	+	123715850	123715850	8553170	1	549,	0,
#Partially deleted in new
chr3	123737240	123800188	chr3:123737240-123800188	0	-	123737240	123737240	8553170	6	303,166,49,208,168,356,	0,1656,2712,15090,56436,62592,
#Partially deleted in new
chr3	123738963	123793887	chr3:123738963-123793887	0	-	123738963	123738963	8553170	4	99,49,208,211,	0,989,13367,54713,
#Deleted in new
chr3	123814076	123814207	chr3:123814076-123814207	3	+	123814076	123814076	8553170	1	131,	0,
#Partially deleted in new
chr3	123897304	123961208	chr3:123897304-123961208	0	-	123897304	123897304	8553170	2	309,65,	0,63839,
#Partially deleted in new
chr3	123897510	123946892	chr3:123897510-123946892	0	-	123897510	123946892	789624	6	103,133,219,83,142,90,	0,33591,33797,36162,47338,49292,
#Partially deleted in new
chr3	123913452	123961408	chr3:123913452-123961408	3	-	123914778	123961317	789624	12	2266,133,219,83,142,517,95,237,70,73,56,265,	0,17649,17855,20220,31396,33350,35238,35443,42593,42902,43287,47691,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	123913716	123957083	chr3:123913716-123957083	1	-	123914778	123949028	789624	9	2002,133,219,83,142,517,95,237,4489,	0,17385,17591,19956,31132,33086,34974,35179,38878,
#Partially deleted in new
chr3	123913724	123961272	chr3:123913724-123961272	0	-	123956397	123961272	789624	12	1994,133,219,83,142,517,95,237,123,70,73,129,	0,17377,17583,19948,31124,33078,34966,35171,42118,42321,42630,47419,
#Partially deleted in new
chr3	123913724	123961349	chr3:123913724-123961349	0	-	123913724	123913724	8553170	10	1408,133,219,83,142,517,95,237,953,206,	0,17377,17583,19948,31124,33078,34966,35171,42118,47419,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	123913726	123958900	chr3:123913726-123958900	1	-	123914778	123949028	789624	9	1992,133,219,83,142,517,95,237,3058,	0,17375,17581,19946,31122,33076,34964,35169,42116,
#Partially deleted in new
chr3	123914318	123961229	chr3:123914318-123961229	1	-	123914778	123961173	789624	12	1400,133,219,83,142,517,95,237,70,73,56,86,	0,16783,16989,19354,30530,32484,34372,34577,41727,42036,42421,46825,
#Partially deleted in new
chr3	123914318	123961378	chr3:123914318-123961378	1	-	123914778	123961317	789624	12	1400,133,219,83,142,517,95,237,70,73,56,235,	0,16783,16989,19354,30530,32484,34372,34577,41727,42036,42421,46825,
#Partially deleted in new
chr3	123914621	123961260	chr3:123914621-123961260	1	-	123914778	123961173	789624	13	1097,133,219,83,142,517,95,237,123,70,73,56,117,	0,16480,16686,19051,30227,32181,34069,34274,41221,41424,41733,42118,46522,
#Partially deleted in new
chr3	123914661	123961212	chr3:123914661-123961212	0	-	123914661	123914661	8553170	2	628,69,	0,46482,
#Partially deleted in new
chr3	123915198	123949313	chr3:123915198-123949313	0	-	123915198	123949028	789624	8	91,133,219,83,142,40,95,418,	0,15903,16109,18474,29650,32081,33492,33697,
#Deleted in new
chr3	123930771	123931459	chr3:123930771-123931459	0	-	123930771	123930771	8553170	2	463,152,	0,536,
#Partially deleted in new
chr3	123933524	123946868	chr3:123933524-123946868	0	-	123933524	123933524	8553170	3	231,142,66,	0,11324,13278,
#Partially deleted in new
chr3	123933526	123948933	chr3:123933526-123948933	0	-	123933526	123933526	8553170	5	229,142,40,95,38,	0,11322,13753,15164,15369,
#Partially deleted in new
chr3	123946803	123949492	chr3:123946803-123949492	0	-	123946803	123949028	789624	5	254,40,95,237,109,	0,476,1887,2092,2580,
#Partially deleted in new
chr3	123947012	123961225	chr3:123947012-123961225	0	-	123956397	123961225	789624	6	307,95,237,70,73,82,	0,1678,1883,9033,9342,14131,
#Partially deleted in new
chr3	123947195	123949575	chr3:123947195-123949575	0	-	123947195	123949028	789624	4	124,95,237,111,	0,1495,1700,2269,
#Partially deleted in new
chr3	123947300	123961381	chr3:123947300-123961381	0	-	123947300	123947300	8553170	4	19,95,237,238,	0,1390,1595,13843,
#Partially deleted in new
chr3	123948707	123961209	chr3:123948707-123961209	0	-	123948707	123948707	8553170	6	78,237,273,73,56,66,	0,188,7135,7647,8032,12436,
#Partially deleted in new
chr3	123948945	123961381	chr3:123948945-123961381	0	-	123955944	123961317	789624	3	187,123,238,	0,6897,12198,
#Partially deleted in new
chr3	123956076	123961218	chr3:123956076-123961218	0	-	123956076	123956076	8553170	3	39,441,75,	0,278,5067,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	123968520	123991352	chr3:123968520-123991352	1	-	123969154	123980481	789624	7	701,176,162,118,239,46,172,	0,1521,6858,8343,11845,12858,22660,
#Partially deleted in new
chr3	123969014	123992137	chr3:123969014-123992137	3	-	123969154	123980481	789624	6	207,176,162,118,128,216,	0,1027,6364,7849,11351,22907,
#Partially deleted in new
chr3	123969033	123980727	chr3:123969033-123980727	1	-	123969154	123980481	789624	5	188,176,162,118,362,	0,1008,6345,7830,11332,
#Partially deleted in new
chr3	123974545	123992083	chr3:123974545-123992083	0	-	123974545	123974545	8553170	4	995,118,128,162,	0,2318,5820,17376,
#Partially deleted in new
chr3	123975385	123992046	chr3:123975385-123992046	0	-	123975385	123980481	789624	5	155,118,239,46,125,	0,1478,4980,5993,16536,
#Partially deleted in new
chr3	123975425	123992128	chr3:123975425-123992128	0	-	123975425	123980481	789624	6	115,118,128,46,113,207,	0,1438,4940,5953,15755,16496,
#Partially deleted in new
chr3	123976864	123992178	chr3:123976864-123992178	0	-	123976864	123980481	789624	4	117,128,46,257,	0,3501,4514,15057,
#Partially deleted in new
chr3	123978674	123992087	chr3:123978674-123992087	1	-	123980304	123980481	789624	3	1819,46,44,	0,2704,13369,
#Partially deleted in new
chr3	123978674	123992158	chr3:123978674-123992158	1	-	123980304	123980481	789624	2	1819,237,	0,13247,
#Partially deleted in new
chr3	123979416	123992109	chr3:123979416-123992109	1	-	123980304	123980481	789624	2	1188,188,	0,12505,
#Partially deleted in new
chr3	123980304	123992141	chr3:123980304-123992141	1	-	123980304	123980481	789624	3	300,46,220,	0,1074,11617,
#Partially deleted in new
chr3	124080022	124269013	chr3:124080022-124269013	0	+	124080022	124269013	789624	6	70,80,75,115,193,271,	0,2230,147967,154806,184475,188720,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	124080040	124164685	chr3:124080040-124164685	0	+	124080040	124080040	8553170	8	52,80,47,194,396,84,238,1977,	0,2212,14062,14670,15747,16552,82169,82668,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	124094660	124163570	chr3:124094660-124163570	0	+	124094660	124094660	789624	3	244,238,862,	0,67549,68048,
#Partially deleted in new
chr3	124094680	124519850	chr3:124094680-124519850	1	+	124094837	124518462	789624	34	224,75,115,193,513,123,192,132,231,123,192,209,175,196,167,120,219,150,115,116,123,183,119,67,110,70,90,93,112,191,102,143,103,1451,	0,133309,140148,169817,174062,204110,231299,235180,239584,252462,290164,300454,304016,318789,328131,335975,339626,344207,347264,351480,352082,360496,361929,367209,367843,379982,382564,388127,393523,396013,396642,398059,401630,423719,
#Partially deleted in new
chr3	124094680	124519849	chr3:124094680-124519849	1	+	124094837	124518462	789624	34	224,75,115,193,513,123,192,132,231,123,192,209,175,196,167,120,192,150,115,116,123,183,119,67,110,70,90,93,112,191,102,143,103,1450,	0,133309,140148,169817,174062,204110,231299,235180,239584,252462,290164,300454,304016,318789,328131,335975,339653,344207,347264,351480,352082,360496,361929,367209,367843,379982,382564,388127,393523,396013,396642,398059,401630,423719,
#Partially deleted in new
chr3	124094710	124721188	chr3:124094710-124721188	3	+	124094837	124719470	789624	60	194,75,115,193,513,123,192,132,231,123,192,209,175,196,167,120,219,150,115,116,123,183,119,67,110,70,90,93,112,191,102,143,103,247,284,105,96,131,67,104,70,87,93,51,78,186,172,239,254,124,60,28,172,122,132,165,79,201,139,2264,	0,133279,140118,169787,174032,204080,231269,235150,239554,252432,290134,300424,303986,318759,328101,335945,339596,344177,347234,351450,352052,360466,361899,367179,367813,379952,382534,388097,393493,395983,396612,398029,401600,468132,537709,539138,542497,556097,560890,562737,563023,563720,564654,566212,567140,571738,572301,576949,579650,583479,584747,599093,599621,601423,602882,605158,607327,618224,622536,624214,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	124094752	124164686	chr3:124094752-124164686	0	+	124094837	124100379	789624	5	152,43,209,238,1978,	0,4608,5575,67457,67956,
#Deleted in new
chr3	124132928	124133025	chr3:124132928-124133025	3	+	124132928	124132928	5263520	1	97,	0,
#Partially deleted in new
chr3	124151959	124153063	chr3:124151959-124153063	7	-	124151959	124151959	16724991	2	557,155,	0,949,
#Partially deleted in new
chr3	124227989	124721189	chr3:124227989-124721189	0	+	124227989	124719470	789624	59	75,115,193,513,123,192,132,231,123,192,209,175,196,167,120,192,150,115,116,123,183,119,67,110,70,90,93,112,191,102,143,103,247,284,105,96,131,67,104,70,87,93,51,78,186,172,239,254,124,60,28,172,122,132,165,79,201,139,2265,	0,6839,36508,40753,70801,97990,101871,106275,119153,156855,167145,170707,185480,194822,202666,206344,210898,213955,218171,218773,227187,228620,233900,234534,246673,249255,254818,260214,262704,263333,264750,268321,334853,404430,405859,409218,422818,427611,429458,429744,430441,431375,432933,433861,438459,439022,443670,446371,450200,451468,465814,466342,468144,469603,471879,474048,484945,489257,490935,
#Partially deleted in new
chr3	124268590	124326085	chr3:124268590-124326085	0	+	124268590	124268590	8553170	3	665,123,106,	0,30200,57389,
#Partially deleted in new
chr3	124334426	124395560	chr3:124334426-124395560	0	+	124334426	124395398	789624	4	69,123,192,426,	0,12716,50418,60708,
#Partially deleted in new
chr3	124374331	124374437	chr3:124374331-124374437	3	+	124374331	124374331	5263520	1	106,	0,
#Partially deleted in new
chr3	124384562	124398871	chr3:124384562-124398871	0	+	124384562	124384562	8553170	3	474,209,175,	0,10572,14134,
#Partially deleted in new
chr3	124384718	124422892	chr3:124384718-124422892	0	+	124384718	124384718	8553170	5	318,170,175,196,81,	0,10416,13978,28751,38093,
#Partially deleted in new
chr3	124384824	124488865	chr3:124384824-124488865	0	+	124384824	124384824	8553170	19	212,170,175,196,167,120,219,150,115,116,123,183,119,67,110,70,90,93,662,	0,10310,13872,28645,37987,45831,49482,54063,57120,61336,61938,70352,71785,77065,77699,89838,92420,97983,103379,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	124407690	124407783	chr3:124407690-124407783	3	+	124407690	124407690	8553170	1	93,	0,
#Partially deleted in new
chr3	124455134	124462674	chr3:124455134-124462674	0	+	124455134	124455134	8553170	4	225,119,67,151,	0,1475,6755,7389,
#Partially deleted in new
chr3	124488287	124491690	chr3:124488287-124491690	0	+	124488287	124488287	8553170	3	28,191,368,	0,2406,3035,
#Partially deleted in new
chr3	124504738	124675427	chr3:124504738-124675427	0	+	124504738	124504738	8553170	16	212,247,284,105,131,67,104,70,87,93,51,78,186,172,239,1064,	0,58104,127681,129110,146069,150862,152709,152995,153692,154626,156184,157112,161710,162273,166921,169625,
#Partially deleted in new
chr3	124562699	124632598	chr3:124562699-124632598	0	+	124562699	124562699	8553170	2	390,179,	0,69720,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr3	124584658	124726325	chr3:124584658-124726325	1	+	124584821	124719470	789624	27	248,284,105,96,131,67,104,70,87,93,51,78,186,172,239,254,124,60,28,172,122,132,165,79,201,139,7401,	0,47761,49190,52549,66149,70942,72789,73075,73772,74706,76264,77192,81790,82353,87001,89702,93531,94799,109145,109673,111475,112934,115210,117379,128276,132588,134266,
#Partially deleted in new
chr3	124584681	124650915	chr3:124584681-124650915	0	+	124584821	124650915	789624	4	225,284,105,108,	0,47738,49167,66126,
#Partially deleted in new
chr3	124637096	124674958	chr3:124637096-124674958	0	+	124637096	124637096	8553170	13	207,131,67,104,70,87,93,51,78,186,172,239,595,	0,13711,18504,20351,20637,21334,22268,23826,24754,29352,29915,34563,37267,
#Deleted in new
chr3	124674575	124678637	chr3:124674575-124678637	0	+	124674575	124674575	8553170	2	39,448,	0,3614,
#Deleted in new
chr3	124677339	124679749	chr3:124677339-124679749	0	+	124677339	124677339	8553170	3	268,124,292,	0,850,2118,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	124723787	124726325	chr3:124723787-124726325	3	+	124723787	124723787	8553170	1	2538,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	124730365	124749273	chr3:124730365-124749273	3	+	124730471	124744084	0	6	262,154,672,176,115,5359,	0,4727,7202,9658,11786,13549,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	124730432	124744757	chr3:124730432-124744757	0	+	124730471	124737585	789624	5	195,672,176,115,843,	0,7135,9591,11719,13482,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	124730444	124744757	chr3:124730444-124744757	0	+	124730471	124731550	789624	7	183,99,154,672,176,115,843,	0,1061,4648,7123,9579,11707,13470,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	124730444	124731550	chr3:124730444-124731550	1	+	124730471	124731550	789624	2	183,45,	0,1061,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	124730451	124744757	chr3:124730451-124744757	0	+	124730471	124731550	789624	6	176,99,672,176,115,843,	0,1054,7116,9572,11700,13463,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	124730451	124744757	chr3:124730451-124744757	0	+	124730471	124738033	789624	6	176,154,325,176,115,843,	0,4641,7463,9572,11700,13463,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	124730451	124744757	chr3:124730451-124744757	0	+	124730471	124738286	789624	6	176,154,876,176,115,843,	0,4641,7116,9572,11700,13463,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	124730451	124744757	chr3:124730451-124744757	0	+	124730471	124737585	789624	3	176,672,843,	0,7116,13463,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	124732438	124732516	chr3:124732438-124732516	3	+	124732438	124732438	5263520	1	78,	0,
#Deleted in new
chr3	124733417	124733754	chr3:124733417-124733754	7	-	124733417	124733417	16724991	1	337,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	124738130	124742665	chr3:124738130-124742665	0	+	124738130	124738130	8553170	3	109,176,514,	0,1893,4021,
#Partially deleted in new
chr3	124738624	124744070	chr3:124738624-124744070	0	+	124738624	124738624	8553170	4	111,176,115,156,	0,1399,3527,5290,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	124761947	124887297	chr3:124761947-124887297	3	-	124763622	124887000	789624	15	1771,167,120,101,223,430,135,90,96,162,169,250,205,86,367,	0,2443,4278,7065,11742,34440,47074,55673,57791,59365,79435,86361,97294,111498,124983,
#Partially deleted in new
chr3	124762947	124770182	chr3:124762947-124770182	0	-	124762947	124762947	8553170	4	771,167,120,1170,	0,1443,3278,6065,
#Partially deleted in new
chr3	124764456	124780704	chr3:124764456-124780704	0	-	124764456	124764456	8553170	5	101,120,101,223,32,	0,1769,4556,9233,16216,
#Partially deleted in new
chr3	124766229	124821458	chr3:124766229-124821458	0	-	124766229	124821458	789624	7	116,101,223,430,90,96,146,	0,2783,7460,30158,51391,53509,55083,
#Partially deleted in new
chr3	124773818	124848451	chr3:124773818-124848451	0	-	124773818	124848451	789624	5	94,430,135,169,143,	0,22569,35203,67564,74490,
#Partially deleted in new
chr3	124781154	124787757	chr3:124781154-124787757	3	+	124781154	124781154	8553170	2	174,286,	0,6317,
#Deleted in new
chr3	124791118	124793104	chr3:124791118-124793104	3	-	124791118	124791118	8553170	1	1986,	0,
#Deleted in new
chr3	124792318	124792562	chr3:124792318-124792562	3	-	124792318	124792318	8553170	1	244,	0,
#Partially deleted in new
chr3	124796539	124809398	chr3:124796539-124809398	0	-	124796539	124796539	8553170	3	278,135,62,	0,12482,12797,
#Partially deleted in new
chr3	124796590	124841551	chr3:124796590-124841551	0	-	124796590	124841551	789624	5	227,135,96,162,169,	0,12431,23148,24722,44792,
#Partially deleted in new
chr3	124817620	124833020	chr3:124817620-124833020	0	-	124817620	124817620	8553170	4	90,96,162,144,	0,2118,3692,15256,
#Partially deleted in new
chr3	124821330	124887827	chr3:124821330-124887827	0	-	124848554	124859278	789624	7	144,169,250,82,205,86,228,	0,20052,26978,35901,37911,52115,66269,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	124841420	124901418	chr3:124841420-124901418	0	-	124841420	124859278	789624	5	131,250,205,86,153,	0,6888,17821,32025,59845,
#Partially deleted in new
chr3	124848358	124887684	chr3:124848358-124887684	0	-	124848358	124859278	789624	4	200,205,86,85,	0,10883,25087,39241,
#Partially deleted in new
chr3	124848418	124878719	chr3:124848418-124878719	0	-	124848418	124859278	789624	4	140,205,86,117,	0,10823,25027,30184,
#Deleted in new
chr3	124862093	124863317	chr3:124862093-124863317	7	-	124862093	124862093	16724991	1	1224,	0,
#Partially deleted in new
chr3	124905441	124934751	chr3:124905441-124934751	3	-	124908146	124934712	789624	12	1301,202,85,38,130,120,164,56,107,123,462,91,	0,2705,4973,6662,7669,8120,10875,14792,16755,18085,22090,29219,
#Partially deleted in new
chr3	124910470	124912208	chr3:124910470-124912208	0	-	124910470	124910470	8553170	2	29,105,	0,1633,
#Partially deleted in new
chr3	124916335	124934747	chr3:124916335-124934747	0	-	124916335	124934712	789624	6	145,56,107,123,69,87,	0,3898,5861,7191,11196,18325,
#Partially deleted in new
chr3	124920166	124927771	chr3:124920166-124927771	0	-	124920166	124920166	8553170	4	123,107,123,240,	0,2030,3360,7365,
#Partially deleted in new
chr3	124927898	124953819	chr3:124927898-124953819	0	-	124927898	124927898	8553170	5	95,180,126,140,40,	0,10254,11496,12203,25881,
#Partially deleted in new
chr3	124965709	125055958	chr3:124965709-125055958	3	-	124970651	125055890	0	17	5092,175,88,38,43,135,161,59,104,120,117,1368,336,339,303,294,384,	0,8021,12149,25077,25234,31979,36142,36547,39555,43995,44729,46913,53552,55082,61495,63485,89865,
#Partially deleted in new
chr3	124967476	125002020	chr3:124967476-125002020	0	-	124970651	125002020	789624	7	3325,175,88,38,43,135,169,	0,6254,10382,23310,23467,30212,34375,
#Partially deleted in new
chr3	124967496	125019412	chr3:124967496-125019412	0	-	124967496	124967496	8553170	14	3305,175,88,38,43,135,161,59,104,120,117,1368,300,151,	0,6234,10362,23290,23447,30192,34355,34760,37768,42208,42942,45126,47216,51765,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	124970420	124972156	chr3:124970420-124972156	0	-	124970420	124970420	8553170	2	381,163,	0,1573,
#Partially deleted in new
chr3	124970552	124973907	chr3:124970552-124973907	0	-	124971133	124973907	789624	3	249,106,177,	0,490,3178,
#Deleted in new
chr3	125009514	125010549	chr3:125009514-125010549	0	-	125009514	125009514	8553170	2	310,111,	0,924,
#Partially deleted in new
chr3	125013471	125019496	chr3:125013471-125019496	0	-	125013471	125019496	789624	3	519,300,235,	0,1241,5790,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	125058303	125058438	chr3:125058303-125058438	7	-	125058303	125058303	16724991	1	135,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	125082635	125120854	chr3:125082635-125120854	1	-	125083889	125120825	789624	8	1417,61,118,98,646,147,88,256,	0,5674,8803,9465,24845,27553,36133,37963,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr3	125082637	125211399	chr3:125082637-125211399	1	-	125083889	125211349	789624	13	1415,61,118,98,646,147,88,88,114,232,192,147,101,	0,5672,8801,9463,24843,27551,36131,37961,53031,95105,104599,107737,128661,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr3	125082958	125190525	chr3:125082958-125190525	0	-	125177826	125190525	789624	13	1094,61,118,98,646,147,88,26,88,114,222,192,151,	0,5351,8480,9142,24522,27230,35810,36907,37640,52710,94784,104278,107416,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	125083142	125123599	chr3:125083142-125123599	0	-	125083142	125083142	8553170	6	910,646,147,88,88,70,	0,24338,27046,35626,37456,40387,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	125083156	125212765	chr3:125083156-125212765	3	-	125083889	125211349	789624	14	896,61,118,98,646,147,88,88,114,232,192,147,96,66,	0,5153,8282,8944,24324,27032,35612,37442,52512,94586,104080,107218,128142,129543,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	125083649	125125979	chr3:125083649-125125979	0	-	125083649	125083649	8553170	9	403,61,118,98,646,147,88,88,104,	0,4660,7789,8451,23831,26539,35119,36949,42226,
#Partially deleted in new
chr3	125088055	125107577	chr3:125088055-125107577	0	-	125088055	125088055	8553170	4	254,118,98,97,	0,3383,4045,19425,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	125107844	125119144	chr3:125107844-125119144	0	-	125107844	125107844	8553170	3	282,147,376,	0,2344,10924,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	125107880	125110718	chr3:125107880-125110718	0	-	125107880	125107880	8553170	2	246,530,	0,2308,
#Partially deleted in new
chr3	125107944	125120940	chr3:125107944-125120940	0	-	125107944	125107944	8553170	5	182,147,88,88,56,	0,2244,10824,12654,12940,
#Partially deleted in new
chr3	125108044	125151215	chr3:125108044-125151215	0	-	125108044	125108044	8553170	6	82,147,88,88,114,67,	0,2144,10724,12554,27624,43104,
#Partially deleted in new
chr3	125110271	125190450	chr3:125110271-125190450	0	-	125110271	125190450	789624	6	64,88,88,114,192,76,	0,8497,10327,25397,76965,80103,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	125119096	125119200	chr3:125119096-125119200	3	-	125119096	125119096	8553170	1	104,	0,
#Deleted in new
chr3	125151464	125151552	chr3:125151464-125151552	3	-	125151464	125151464	5263520	1	88,	0,
#Partially deleted in new
chr3	125177930	125192695	chr3:125177930-125192695	0	-	125177930	125190476	789624	4	44,192,147,110,	0,9306,12444,14655,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	125225560	125375354	chr3:125225560-125375354	3	-	125232340	125313640	789624	9	8379,119,84,124,126,349,136,81,253,	0,8650,52165,53563,62542,87747,97748,105597,149541,
#Partially deleted in new
chr3	125232058	125375278	chr3:125232058-125375278	1	-	125232340	125323394	789624	6	596,30,84,57,81,177,	0,2241,45667,91329,99099,143043,
#Partially deleted in new
chr3	125232075	125375249	chr3:125232075-125375249	1	-	125232340	125313640	789624	9	1864,119,84,124,126,349,57,81,148,	0,2135,45650,47048,56027,81232,91312,99082,143026,
#Partially deleted in new
chr3	125232078	125375251	chr3:125232078-125375251	1	-	125232340	125313640	789624	8	1861,119,84,124,126,349,136,150,	0,2132,45647,47045,56024,81229,91230,143023,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	125232327	125375313	chr3:125232327-125375313	1	-	125232340	125313640	789624	10	1612,119,84,124,126,349,117,136,81,212,	0,1883,45398,46796,55775,80980,82609,90981,98830,142774,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	125232340	125292793	chr3:125232340-125292793	0	-	125232340	125232340	8553170	6	1599,119,84,124,126,329,	0,1870,45385,46783,55762,60124,
#Deleted in new
chr3	125232511	125233281	chr3:125232511-125233281	0	-	125232511	125232511	8553170	2	143,173,	0,597,
#Deleted in new
chr3	125310880	125311350	chr3:125310880-125311350	7	+	125310880	125310880	16724991	1	470,	0,
#Partially deleted in new
chr3	125313390	125357818	chr3:125313390-125357818	0	-	125313390	125313640	789624	4	266,136,81,83,	0,9918,17767,44345,
#Partially deleted in new
chr3	125313414	125357280	chr3:125313414-125357280	0	-	125313414	125313640	789624	4	242,136,81,304,	0,9894,17743,43562,
#Partially deleted in new
chr3	125313563	125375267	chr3:125313563-125375267	0	-	125313563	125313640	789624	5	93,136,81,90,166,	0,9745,17594,25258,61538,
#Partially deleted in new
chr3	125344084	125344797	chr3:125344084-125344797	7	-	125344084	125344084	16724991	1	713,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	125388933	125388997	chr3:125388933-125388997	3	+	125388933	125388933	8553170	1	64,	0,
#Partially deleted in new
chr3	125446643	125520197	chr3:125446643-125520197	3	-	125447778	125520172	789624	14	1183,115,146,100,90,66,62,73,56,48,150,136,122,166,	0,4661,7166,10622,14127,22810,30051,33603,42764,50697,51190,51415,57979,73388,
#Partially deleted in new
chr3	125447710	125520181	chr3:125447710-125520181	0	-	125498185	125520172	789624	13	116,115,146,100,90,66,62,73,56,48,150,136,150,	0,3594,6099,9555,13060,21743,28984,32536,41697,49630,50123,50348,72321,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	125449069	125460801	chr3:125449069-125460801	0	-	125449069	125449069	8553170	5	186,115,146,100,31,	0,2235,4740,8196,11701,
#Partially deleted in new
chr3	125469443	125520191	chr3:125469443-125520191	0	-	125469443	125469443	8553170	7	76,62,48,150,136,122,160,	0,7251,27897,28390,28615,35179,50588,
#Partially deleted in new
chr3	125476694	125504744	chr3:125476694-125504744	0	-	125480307	125504744	789624	6	62,73,48,150,136,122,	0,3552,20646,21139,21364,27928,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	125528243	125528349	chr3:125528243-125528349	3	-	125528243	125528243	8553170	1	106,	0,
#Partially deleted in new
chr3	125528857	125595090	chr3:125528857-125595090	3	-	125530514	125594800	0	13	1723,154,183,187,499,141,146,202,177,80,176,69,454,	0,3003,9593,18548,23323,31521,34840,38536,47331,50102,51007,54052,65779,
#Deleted in new
chr3	125679572	125679781	chr3:125679572-125679781	7	+	125679572	125679572	16724991	1	209,	0,
#Deleted in new
chr3	125681304	125681453	chr3:125681304-125681453	7	+	125681304	125681304	16724991	1	149,	0,
#Partially deleted in new
chr3	125703348	125704312	chr3:125703348-125704312	7	+	125703348	125703348	16724991	1	964,	0,
#Partially deleted in new
chr3	125712138	125713045	chr3:125712138-125713045	7	+	125712138	125712138	16724991	1	907,	0,
#Deleted in new
chr3	125724538	125725445	chr3:125724538-125725445	7	+	125724538	125724538	16724991	1	907,	0,
#Partially deleted in new
chr3	125734294	125735198	chr3:125734294-125735198	7	+	125734294	125734294	16724991	1	904,	0,
#Partially deleted in new
chr3	125747083	125748098	chr3:125747083-125748098	7	+	125747083	125747083	16724991	1	1015,	0,
#Deleted in new
chr3	125756085	125756462	chr3:125756085-125756462	7	+	125756085	125756085	16724991	1	377,	0,
#Deleted in new
chr3	125766600	125766818	chr3:125766600-125766818	7	+	125766600	125766600	16724991	1	218,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	125766647	125841290	chr3:125766647-125841290	0	+	125766647	125766647	8553170	2	171,980,	0,73663,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	125774713	125797953	chr3:125774713-125797953	3	+	125774713	125774713	789624	2	194,179,	0,23061,
#Partially deleted in new
chr3	125787887	125788146	chr3:125787887-125788146	7	-	125787887	125787887	16724991	1	259,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	125790403	125790552	chr3:125790403-125790552	3	-	125790403	125790403	5263520	1	149,	0,
#Partially deleted in new
chr3	125795105	125795885	chr3:125795105-125795885	7	+	125795105	125795105	16724991	1	780,	0,
#Deleted in new
chr3	125816081	125816286	chr3:125816081-125816286	7	-	125816081	125816081	16724991	1	205,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	125827237	125885968	chr3:125827237-125885968	1	-	125827237	125827237	789624	5	218,181,105,93,89,	0,44835,46503,47836,58642,
#Partially deleted in new
chr3	125827237	125873848	chr3:125827237-125873848	0	-	125827237	125827237	8553170	4	218,107,181,108,	0,43473,44835,46503,
#Partially deleted in new
chr3	125827256	125886077	chr3:125827256-125886077	0	-	125827256	125827256	789624	3	199,105,198,	0,46484,58623,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	125827393	125915729	chr3:125827393-125915729	1	-	125827393	125827393	8553170	6	62,141,62,348,156,77,	0,77567,81388,87026,87826,88259,
#Partially deleted in new
chr3	125848222	125909372	chr3:125848222-125909372	7	+	125848222	125848222	16724991	4	166,128,622,170,	0,34734,53210,60980,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	125860666	125863073	chr3:125860666-125863073	0	-	125860666	125860666	8553170	2	455,258,	0,2149,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	125862573	125887335	chr3:125862573-125887335	1	-	125862573	125862573	8553170	2	540,1456,	0,23306,
#Duplicated in new
chr3	125862880	125866202	chr3:125862880-125866202	0	-	125862880	125862880	8553170	2	233,120,	0,3202,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	125886835	125889075	chr3:125886835-125889075	0	-	125886835	125886835	8553170	2	230,493,	0,1747,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	125886835	125888853	chr3:125886835-125888853	2	-	125886835	125886835	8553170	3	230,65,505,	0,326,1513,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	125886835	125888921	chr3:125886835-125888921	0	-	125886835	125886835	8553170	3	230,65,339,	0,326,1747,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	125886835	125888861	chr3:125886835-125888861	0	-	125886835	125886835	8553170	2	391,279,	0,1747,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	125886864	125889075	chr3:125886864-125889075	0	-	125886864	125886864	8553170	3	201,191,30,	0,1484,2181,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	125886864	125889001	chr3:125886864-125889001	0	-	125886864	125886864	8553170	5	201,65,195,23,419,	0,297,855,1484,1718,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	125886864	125910489	chr3:125886864-125910489	0	-	125886864	125886864	8553170	5	201,65,124,93,270,	0,297,21572,21917,23355,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	125886914	125889019	chr3:125886914-125889019	1	-	125886914	125886914	8553170	2	151,671,	0,1434,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	125888603	125915669	chr3:125888603-125915669	1	-	125888603	125888603	8553170	6	77,270,124,93,104,17,	0,16224,19833,20178,21616,27049,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	125907764	125916360	chr3:125907764-125916360	3	-	125907764	125907764	8553170	6	490,129,93,137,55,77,	0,672,1017,3037,6948,8519,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	125908004	125910272	chr3:125908004-125910272	0	-	125908004	125908004	8553170	3	250,124,53,	0,432,2215,
#Deleted in new
chr3	125914466	125915883	chr3:125914466-125915883	1	-	125914466	125914466	8553170	2	301,664,	0,753,
#Deleted in new
chr3	125914556	125916384	chr3:125914556-125916384	1	-	125914556	125914556	8553170	3	211,256,101,	0,663,1727,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	125916619	125930010	chr3:125916619-125930010	5	+	125916619	125916619	16724991	5	100,63,81,150,1516,	0,2244,4205,8346,11875,
#Partially deleted in new
chr3	125916623	125928595	chr3:125916623-125928595	5	+	125916623	125916623	16724991	8	96,63,81,102,133,262,150,101,	0,2240,4201,5840,7040,7255,8342,11871,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	125916624	125929989	chr3:125916624-125929989	4	+	125916624	125916624	16724991	3	95,81,1495,	0,4200,11870,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	125916629	125930024	chr3:125916629-125930024	7	+	125916629	125916629	16724991	5	188,63,81,150,1530,	0,2234,4195,8336,11865,
#Partially deleted in new
chr3	125929274	125934473	chr3:125929274-125934473	1	-	125929351	125934473	789624	6	293,73,115,60,122,38,	0,1282,2363,3375,4300,5161,
#Deleted in new
chr3	125958555	125958817	chr3:125958555-125958817	7	+	125958555	125958555	16724991	1	262,	0,
#Partially deleted in new
chr3	125969143	125983454	chr3:125969143-125983454	3	+	125972054	125983320	789624	7	257,46,128,118,162,176,201,	0,1973,2899,6419,7860,13126,14110,
#Partially deleted in new
chr3	125969159	125983454	chr3:125969159-125983454	1	+	125972054	125983320	789624	6	241,128,118,162,176,201,	0,2883,6403,7844,13110,14094,
#Partially deleted in new
chr3	125969163	125973855	chr3:125969163-125973855	1	+	125972054	125972231	789624	2	237,1813,	0,2879,
#Partially deleted in new
chr3	125969193	125977160	chr3:125969193-125977160	0	+	125972054	125977160	789624	6	207,113,46,128,118,157,	0,845,1923,2849,6369,7810,
#Partially deleted in new
chr3	125969197	125973233	chr3:125969197-125973233	0	+	125969197	125969197	8553170	4	203,46,128,344,	0,1919,2845,3692,
#Partially deleted in new
chr3	125969212	125973143	chr3:125969212-125973143	0	+	125969212	125969212	8553170	3	188,128,254,	0,2830,3677,
#Partially deleted in new
chr3	125969213	125977077	chr3:125969213-125977077	0	+	125972054	125977077	789624	7	187,71,131,46,128,118,74,	0,319,807,1903,2829,6349,7790,
#Partially deleted in new
chr3	125969238	125977993	chr3:125969238-125977993	0	+	125969238	125969238	8553170	4	162,128,118,990,	0,2804,6324,7765,
#Partially deleted in new
chr3	125975503	125983451	chr3:125975503-125983451	1	+	125977045	125983320	789624	4	177,162,176,198,	0,1500,6766,7750,
#Partially deleted in new
chr3	125975623	125983454	chr3:125975623-125983454	1	+	125977045	125983320	789624	4	57,348,176,201,	0,1194,6646,7630,
#Partially deleted in new
chr3	126006354	126084109	chr3:126006354-126084109	1	-	126007015	126068219	789624	11	871,149,135,80,145,147,145,72,108,300,17,	0,2377,6260,9139,10376,16431,19980,27252,44588,61592,77738,
#Partially deleted in new
chr3	126006356	126084304	chr3:126006356-126084304	1	-	126006406	126068219	789624	11	208,112,149,135,80,145,147,145,72,300,212,	0,757,2375,6258,9137,10374,16429,19978,27250,61590,77736,
#Partially deleted in new
chr3	126006357	126056838	chr3:126006357-126056838	1	-	126007015	126056552	789624	10	868,149,135,80,145,147,145,72,108,481,	0,2374,6257,9136,10373,16428,19977,27249,44585,50000,
#Deleted in new
chr3	126006357	126006886	chr3:126006357-126006886	0	-	126006357	126006357	8553170	2	271,170,	0,359,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	126006362	126023764	chr3:126006362-126023764	0	-	126006362	126006362	8553170	6	863,149,135,80,145,979,	0,2369,6252,9131,10368,16423,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	126006362	126025790	chr3:126006362-126025790	0	-	126006362	126006362	8553170	7	202,112,149,135,80,145,3005,	0,751,2369,6252,9131,10368,16423,
#Partially deleted in new
chr3	126006372	126084304	chr3:126006372-126084304	3	-	126006406	126068219	789624	12	192,112,149,135,80,145,147,145,72,108,300,212,	0,741,2359,6242,9121,10358,16413,19962,27234,44570,61574,77720,
#Partially deleted in new
chr3	126006855	126101557	chr3:126006855-126101557	1	-	126007015	126050972	789624	10	370,149,135,80,145,147,145,72,108,129,	0,1876,5759,8638,9875,15930,19479,26751,44087,94573,
#Partially deleted in new
chr3	126016730	126101561	chr3:126016730-126101561	0	-	126022923	126050972	789624	6	145,147,87,72,108,133,	0,6055,9662,16876,34212,84698,
#Partially deleted in new
chr3	126016783	126084169	chr3:126016783-126084169	0	-	126016783	126068219	789624	7	92,147,145,72,153,300,77,	0,6002,9551,16823,34114,51163,67309,
#Partially deleted in new
chr3	126022821	126084123	chr3:126022821-126084123	0	-	126022821	126068219	789624	7	111,145,72,108,156,300,31,	0,3513,10785,28121,33536,45125,61271,
#Partially deleted in new
chr3	126024802	126084124	chr3:126024802-126084124	0	-	126024802	126024802	8553170	5	103,145,72,300,32,	0,1532,8804,43144,59290,
#Partially deleted in new
chr3	126026302	126068180	chr3:126026302-126068180	0	-	126026302	126026302	8553170	4	177,72,108,234,	0,7304,24640,41644,
#Partially deleted in new
chr3	126026328	126084023	chr3:126026328-126084023	0	-	126026328	126068219	789624	5	151,72,108,300,95,	0,7278,24614,41618,57600,
#Partially deleted in new
chr3	126026383	126084123	chr3:126026383-126084123	0	-	126026383	126068219	789624	4	96,153,300,31,	0,24514,41563,57709,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	126026411	126084123	chr3:126026411-126084123	0	-	126026411	126068219	789624	5	68,72,300,117,31,	0,7195,41535,46741,57681,
#Partially deleted in new
chr3	126033603	126084096	chr3:126033603-126084096	0	-	126033603	126068219	789624	4	75,108,300,43,	0,17339,34343,50450,
#Partially deleted in new
chr3	126033603	126079034	chr3:126033603-126079034	0	-	126033603	126068219	789624	4	75,108,300,61,	0,17339,34343,45370,
#Partially deleted in new
chr3	126033603	126083922	chr3:126033603-126083922	0	-	126033603	126068219	789624	4	75,108,300,47,	0,17339,34343,50272,
#Partially deleted in new
chr3	126033644	126101555	chr3:126033644-126101555	0	-	126033644	126068219	789624	4	34,108,300,127,	0,17298,34302,67784,
#Deleted in new
chr3	126056922	126058228	chr3:126056922-126058228	3	+	126056922	126056922	8553170	2	68,311,	0,995,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	126067962	126070416	chr3:126067962-126070416	0	-	126067962	126068219	789624	2	284,216,	0,2238,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	126084219	126085452	chr3:126084219-126085452	1	+	126084219	126084219	8553170	2	233,94,	0,1139,
#Partially deleted in new
chr3	126103561	126180802	chr3:126103561-126180802	1	-	126130247	126160979	0	22	285,200,106,166,99,100,94,88,106,71,128,120,148,92,126,138,90,102,166,235,150,327,	0,2164,3579,6382,9220,10995,14443,20802,22054,26661,31973,33202,34251,43273,46844,49882,50992,51840,53781,54843,57291,76914,
#Partially deleted in new
chr3	126103568	126181186	chr3:126103568-126181186	1	-	126103790	126180968	0	23	278,200,106,166,99,100,94,88,106,71,151,128,120,148,92,126,138,90,102,166,235,150,225,	0,2157,3572,6375,9213,10988,14436,20795,22047,26654,27815,31966,33195,34244,43266,46837,49875,50985,51833,53774,54836,57284,77393,
#Partially deleted in new
chr3	126103570	126179919	chr3:126103570-126179919	1	-	126103790	126160979	0	23	276,200,106,166,99,100,94,88,106,71,151,128,120,148,92,126,138,90,102,166,235,150,205,	0,2155,3570,6373,9211,10986,14434,20793,22045,26652,27813,31964,33193,34242,43264,46835,49873,50983,51831,53772,54834,57282,76144,
#Partially deleted in new
chr3	126103572	126180802	chr3:126103572-126180802	3	-	126103790	126160979	0	23	274,200,106,166,99,100,94,88,106,71,151,128,120,148,92,126,138,90,102,166,235,150,327,	0,2153,3568,6371,9209,10984,14432,20791,22043,26650,27811,31962,33191,34240,43262,46833,49871,50981,51829,53770,54832,57280,76903,
#Partially deleted in new
chr3	126103572	126180586	chr3:126103572-126180586	1	-	126103790	126160979	0	21	274,200,106,166,99,100,94,88,106,71,151,128,120,148,92,126,138,66,224,150,111,	0,2153,3568,6371,9209,10984,14432,20791,22043,26650,27811,31962,33191,34240,43262,46833,49871,50981,54843,57280,76903,
#Partially deleted in new
chr3	126103572	126115502	chr3:126103572-126115502	0	-	126103572	126103572	8553170	5	2353,106,166,99,946,	0,3568,6371,9209,10984,
#Partially deleted in new
chr3	126103574	126180575	chr3:126103574-126180575	1	-	126130247	126160979	0	21	272,200,106,166,99,94,88,106,71,128,120,148,92,126,138,90,102,166,235,150,100,	0,2151,3566,6369,9207,14430,20789,22041,26648,31960,33189,34238,43260,46831,49869,50979,51827,53768,54830,57278,76901,
#Deleted in new
chr3	126103639	126108069	chr3:126103639-126108069	3	+	126103639	126103639	789624	4	27,142,82,186,	0,184,971,4244,
#Deleted in new
chr3	126105860	126110288	chr3:126105860-126110288	0	-	126105860	126105860	8553170	3	65,106,345,	0,1280,4083,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	126128389	126156683	chr3:126128389-126156683	0	-	126128389	126128389	8553170	10	1904,151,128,120,148,92,551,138,90,1282,	0,2994,7145,8374,9423,18445,22016,25054,26164,27012,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr3	126135075	126180529	chr3:126135075-126180529	0	-	126159549	126160979	789624	13	587,120,148,92,126,138,90,102,166,235,184,150,54,	0,1688,2737,11759,15330,18368,19478,20326,22267,23329,24307,25777,45400,
#Partially deleted in new
chr3	126146855	126156712	chr3:126146855-126156712	0	-	126146855	126146855	8553170	6	71,126,138,90,102,188,	0,3550,6588,7698,8546,9669,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	126151105	126158489	chr3:126151105-126158489	0	-	126151105	126151105	8553170	5	2476,90,96,166,85,	0,3448,4296,6237,7299,
#Partially deleted in new
chr3	126153190	126180586	chr3:126153190-126180586	0	-	126157389	126160979	789624	6	391,90,102,166,150,111,	0,1363,2211,4152,7662,27285,
#Partially deleted in new
chr3	126155498	126181526	chr3:126155498-126181526	0	-	126155498	126160979	789624	5	5,166,235,150,59,	0,1844,2906,5354,25969,
#Partially deleted in new
chr3	126157364	126180802	chr3:126157364-126180802	0	-	126157364	126160979	789624	4	144,235,150,491,	0,1040,3488,22947,
#Partially deleted in new
chr3	126157399	126180994	chr3:126157399-126180994	0	-	126157399	126160979	789624	4	109,235,150,195,	0,1005,3453,23400,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	126158466	126197994	chr3:126158466-126197994	0	-	126158466	126160979	789624	3	173,150,260,	0,2386,39268,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	126158597	126197941	chr3:126158597-126197941	0	-	126159549	126160979	789624	4	42,184,150,207,	0,785,2255,39137,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	126160282	126160445	chr3:126160282-126160445	3	-	126160282	126160282	8553170	1	163,	0,
#Partially deleted in new
chr3	126180064	126210169	chr3:126180064-126210169	0	+	126180064	126180064	789624	2	480,1844,	0,28261,
#Partially deleted in new
chr3	126180075	126208501	chr3:126180075-126208501	0	+	126180075	126180075	8553170	2	290,176,	0,28250,
#Deleted in new
chr3	126207254	126210166	chr3:126207254-126210166	3	+	126207254	126207254	8553170	4	290,45,60,1841,	0,767,923,1071,
#Partially deleted in new
chr3	126266795	126291279	chr3:126266795-126291279	3	+	126266795	126266795	8553170	3	63,111,327,	0,21217,24157,
#Partially deleted in new
chr3	126266816	126288417	chr3:126266816-126288417	1	+	126266816	126266816	8553170	2	42,405,	0,21196,
#Partially deleted in new
chr3	126288866	126294024	chr3:126288866-126294024	3	-	126288866	126288866	8553170	3	71,77,106,	0,1814,5052,
#Partially deleted in new
chr3	126342634	126357442	chr3:126342634-126357442	3	-	126343726	126352922	0	3	1261,1107,206,	0,9206,14602,
#Partially deleted in new
chr3	126352674	126354285	chr3:126352674-126354285	0	-	126352674	126352674	8553170	2	273,274,	0,1337,
#Partially deleted in new
chr3	126393031	126394851	chr3:126393031-126394851	3	-	126393031	126393031	789624	3	262,171,553,	0,451,1267,
#Partially deleted in new
chr3	126393032	126394588	chr3:126393032-126394588	0	-	126393032	126393032	8553170	2	261,113,	0,1443,
#Partially deleted in new
chr3	126393032	126394397	chr3:126393032-126394397	0	-	126393032	126393032	8553170	2	261,99,	0,1266,
#Partially deleted in new
chr3	126394938	126436555	chr3:126394938-126436555	3	+	126396000	126436404	789624	17	40,108,81,95,193,68,164,81,182,42,127,52,152,136,206,94,265,	0,1003,12233,19146,21377,23519,23672,24137,24698,25041,25164,28386,28554,38130,39237,40620,41352,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	126394938	126407227	chr3:126394938-126407227	0	+	126394938	126394938	8553170	5	40,105,108,190,56,	0,386,1003,1551,12233,
#Partially deleted in new
chr3	126395396	126414343	chr3:126395396-126414343	1	+	126396000	126414308	789624	4	33,108,81,259,	0,545,11775,18688,
#Partially deleted in new
chr3	126395971	126436530	chr3:126395971-126436530	1	+	126396000	126436404	789624	16	78,81,95,193,71,164,81,182,42,127,52,152,136,206,94,240,	0,11200,18113,20344,22483,22639,23104,23665,24008,24131,27353,27521,37097,38204,39587,40319,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	126416334	126416863	chr3:126416334-126416863	0	+	126416334	126416334	8553170	2	174,92,	0,437,
#Deleted in new
chr3	126418059	126418694	chr3:126418059-126418694	0	+	126418059	126418059	8553170	2	466,84,	0,551,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	126419765	126420850	chr3:126419765-126420850	0	+	126419765	126419765	8553170	4	53,42,127,221,	0,214,337,864,
#Deleted in new
chr3	126432795	126434569	chr3:126432795-126434569	3	-	126432795	126432795	8553170	1	1774,	0,
#Deleted in new
chr3	126433379	126436556	chr3:126433379-126436556	0	+	126433379	126433379	8553170	4	95,206,94,266,	0,796,2179,2911,
#Partially deleted in new
chr3	126437600	126475919	chr3:126437600-126475919	3	-	126438374	126475865	789624	10	861,96,182,85,686,171,131,79,153,961,	0,2031,4164,22052,23934,28554,33294,34372,34552,37358,
#Deleted in new
chr3	126437600	126443409	chr3:126437600-126443409	0	-	126437600	126437600	8553170	2	861,3778,	0,2031,
#Partially deleted in new
chr3	126437618	126474987	chr3:126437618-126474987	0	-	126461528	126474987	789624	9	843,96,182,951,171,131,79,153,29,	0,2013,4146,23651,28536,33276,34354,34534,37340,
#Partially deleted in new
chr3	126461082	126475865	chr3:126461082-126475865	1	-	126461528	126475865	789624	6	1138,171,131,79,153,907,	0,5072,9812,10890,11070,13876,
#Partially deleted in new
chr3	126481280	126517773	chr3:126481280-126517773	3	-	126482344	126517719	789624	20	1205,100,82,100,99,71,122,73,98,180,63,89,144,67,62,129,60,94,131,180,	0,2088,6917,7995,11137,14757,16770,18056,18776,19414,19937,22714,24420,24664,26461,26686,27135,28304,29383,36313,
#Partially deleted in new
chr3	126481854	126517753	chr3:126481854-126517753	1	-	126482344	126517719	789624	21	631,100,82,100,99,71,122,73,98,180,95,148,89,144,67,62,129,60,94,131,160,	0,1514,6343,7421,10563,14183,16196,17482,18202,18840,19363,19946,22140,23846,24090,25887,26112,26561,27730,28809,35739,
#Partially deleted in new
chr3	126524282	126543291	chr3:126524282-126543291	3	+	126524332	126542578	789624	3	147,83,1559,	0,11988,17450,
#Partially deleted in new
chr3	126524332	126542879	chr3:126524332-126542879	1	+	126524332	126542411	789624	4	97,83,392,574,	0,11938,17400,17973,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	126526998	126558965	chr3:126526998-126558965	0	-	126529349	126553390	789624	6	875,241,71,126,129,339,	0,2133,22538,24998,26303,31628,
#Partially deleted in new
chr3	126549672	126558965	chr3:126549672-126558965	3	-	126549867	126553390	789624	4	406,126,129,339,	0,2324,3629,8954,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	126564564	126564678	chr3:126564564-126564678	7	-	126564564	126564564	16724991	1	114,	0,
#Partially deleted in new
chr3	126571778	126608555	chr3:126571778-126608555	0	-	126607910	126608555	8553170	4	267,487,323,57,	0,377,35872,36720,
#Partially deleted in new
chr3	126571781	126608555	chr3:126571781-126608555	1	-	126572031	126572543	789624	4	264,487,323,57,	0,374,35869,36717,
#Partially deleted in new
chr3	126607051	126655155	chr3:126607051-126655155	1	-	126607904	126654990	789624	16	922,135,96,108,157,77,93,226,116,143,120,73,105,110,61,408,	0,1447,3985,8303,14690,15412,22327,23660,24712,26857,34980,36929,37245,39059,40184,47696,
#Partially deleted in new
chr3	126607488	126609245	chr3:126607488-126609245	0	-	126607488	126607488	8553170	3	485,135,105,	0,1010,1652,
#Partially deleted in new
chr3	126607488	126655101	chr3:126607488-126655101	1	-	126607904	126654990	789624	15	485,135,96,157,77,93,226,116,143,120,73,105,110,61,354,	0,1010,3548,14253,14975,21890,23223,24275,26420,34543,36492,36808,38622,39747,47259,
#Partially deleted in new
chr3	126607904	126654990	chr3:126607904-126654990	3	-	126607904	126654990	0	16	69,135,96,108,157,77,93,226,116,143,120,73,105,110,61,243,	0,594,3132,7450,13837,14559,21474,22807,23859,26004,34127,36076,36392,38206,39331,46843,
#Partially deleted in new
chr3	126607904	126654990	chr3:126607904-126654990	1	-	126607904	126654990	789624	15	69,135,96,157,77,93,226,116,143,120,73,105,110,61,243,	0,594,3132,13837,14559,21474,22807,23859,26004,34127,36076,36392,38206,39331,46843,
#Partially deleted in new
chr3	126624791	126626061	chr3:126624791-126626061	7	+	126624791	126624791	16724991	2	366,162,	0,1108,
#Deleted in new
chr3	126660608	126667348	chr3:126660608-126667348	5	+	126660608	126660608	16724991	6	129,126,63,179,81,132,	0,1211,2451,2722,5612,6608,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	126662080	126671939	chr3:126662080-126671939	7	+	126662080	126662080	16724991	5	139,180,81,243,233,	0,1249,4140,5025,9626,
#Deleted in new
chr3	126662145	126667326	chr3:126662145-126667326	4	+	126662145	126662145	16724991	3	74,180,221,	0,1184,4960,
#Deleted in new
chr3	126672105	126673223	chr3:126672105-126673223	7	-	126672105	126672105	16724991	1	1118,	0,
#Partially deleted in new
chr3	126704219	126960406	chr3:126704219-126960406	3	+	126704312	126960201	789624	8	180,109,70,145,84,71,136,211,	0,22858,26341,28858,148427,210460,253196,255976,
#Partially deleted in new
chr3	126704239	126957833	chr3:126704239-126957833	0	+	126704312	126780351	789624	8	160,109,70,145,91,84,71,418,	0,22838,26321,28838,76100,148407,210440,253176,
#Partially deleted in new
chr3	126704240	126957933	chr3:126704240-126957933	1	+	126704312	126957617	789624	7	159,109,70,145,87,71,518,	0,22837,26320,28837,148403,210439,253175,
#Partially deleted in new
chr3	126704242	126935172	chr3:126704242-126935172	0	+	126704242	126704242	8553170	7	157,109,70,145,84,71,77,	0,22835,26318,28835,148404,210437,230853,
#Partially deleted in new
chr3	126730563	126960391	chr3:126730563-126960391	0	+	126730563	126960201	789624	6	67,145,84,71,127,196,	0,2514,122083,184116,226861,229632,
#Deleted in new
chr3	126766433	126767475	chr3:126766433-126767475	7	-	126766433	126766433	16724991	1	1042,	0,
#Partially deleted in new
chr3	126854863	126949879	chr3:126854863-126949879	0	+	126854863	126854863	8553170	3	85,71,622,	0,59816,94394,
#Partially deleted in new
chr3	126935123	126960398	chr3:126935123-126960398	0	+	126935123	126935123	8553170	4	63,160,136,203,	0,17901,22292,25072,
#Deleted in new
chr3	126957009	126960406	chr3:126957009-126960406	0	+	126957009	126957009	8553170	3	323,136,211,	0,406,3186,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	126973064	126976426	chr3:126973064-126976426	3	+	126973064	126973064	8553170	1	3362,	0,
#Partially deleted in new
chr3	126988593	127037392	chr3:126988593-127037392	3	+	126988593	127034017	789624	31	1194,183,141,101,124,154,100,115,201,97,194,152,121,137,168,94,240,144,235,143,257,67,147,160,104,97,191,170,213,151,3471,	0,2790,14736,16017,16291,16496,17485,19205,23364,25426,25588,25884,26117,26590,27923,28350,28831,29155,29700,31608,33491,34158,39346,39587,40399,40846,41280,41649,43793,44092,45328,
#Deleted in new
chr3	127026384	127035579	chr3:127026384-127035579	0	+	127026384	127026384	8553170	9	1702,160,104,97,191,170,213,151,1658,	0,1796,2608,3055,3489,3858,6002,6301,7537,
#Deleted in new
chr3	127028776	127029529	chr3:127028776-127029529	0	+	127028776	127028776	8553170	2	320,90,	0,663,
#Deleted in new
chr3	127031854	127033986	chr3:127031854-127033986	0	+	127031854	127031854	8553170	4	107,213,151,65,	0,532,831,2067,
#Partially deleted in new
chr3	127193130	127198185	chr3:127193130-127198185	3	+	127196685	127197414	789624	2	145,1595,	0,3460,
#Deleted in new
chr3	127202371	127202473	chr3:127202371-127202473	3	-	127202371	127202371	8553170	1	102,	0,
#Partially deleted in new
chr3	127221193	127221881	chr3:127221193-127221881	7	-	127221193	127221193	16724991	1	688,	0,
#Partially deleted in new
chr3	127240967	127241074	chr3:127240967-127241074	3	-	127240967	127240967	8553170	1	107,	0,
#Deleted in new
chr3	127283783	127288046	chr3:127283783-127288046	3	-	127284059	127287365	789624	3	857,59,168,	0,3530,4095,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	127322306	127390670	chr3:127322306-127390670	3	-	127322306	127322306	789624	5	421,197,51,33,225,	0,2228,33583,33944,68139,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	127489552	127490787	chr3:127489552-127490787	3	+	127489552	127489552	8553170	4	32,111,124,430,	0,131,524,805,
#Deleted in new
chr3	127499104	127499743	chr3:127499104-127499743	0	-	127499104	127499104	8553170	2	169,59,	0,580,
#Deleted in new
chr3	127533624	127537780	chr3:127533624-127537780	0	-	127533624	127533624	8553170	3	145,290,136,	0,492,4020,
#Deleted in new
chr3	127534234	127537778	chr3:127534234-127537778	0	-	127534234	127534234	8553170	3	172,278,134,	0,951,3410,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	127537936	127540485	chr3:127537936-127540485	3	+	127537936	127537936	8553170	4	147,165,247,201,	0,408,1530,2348,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	127571231	127571838	chr3:127571231-127571838	3	-	127571231	127571231	8553170	1	607,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr3	127571265	127598267	chr3:127571265-127598267	3	-	127573520	127580146	8553170	13	2523,81,103,61,111,80,73,87,133,142,341,239,261,	0,3919,4137,4483,4674,5351,5555,5724,8474,8756,23534,24186,26741,
#Partially deleted in new
chr3	127573068	127590707	chr3:127573068-127590707	1	-	127573596	127580146	789624	9	720,81,111,80,73,87,133,142,298,	0,2116,2871,3548,3752,3921,6671,6953,17341,
#Partially deleted in new
chr3	127573068	127580437	chr3:127573068-127580437	1	-	127573520	127580146	789624	10	720,81,103,61,111,80,73,87,133,416,	0,2116,2334,2680,2871,3548,3752,3921,6671,6953,
#Partially deleted in new
chr3	127573086	127590769	chr3:127573086-127590769	1	-	127573520	127580146	789624	11	702,81,103,61,111,80,73,87,133,142,360,	0,2098,2316,2662,2853,3530,3734,3903,6653,6935,17323,
#Partially deleted in new
chr3	127573092	127590734	chr3:127573092-127590734	0	-	127575257	127580146	789624	10	696,81,103,111,80,73,87,133,142,325,	0,2092,2310,2847,3524,3728,3897,6647,6929,17317,
#Partially deleted in new
chr3	127573130	127590703	chr3:127573130-127590703	0	-	127575257	127580146	789624	10	658,81,61,111,80,73,87,133,142,294,	0,2054,2618,2809,3486,3690,3859,6609,6891,17279,
#Partially deleted in new
chr3	127573145	127591088	chr3:127573145-127591088	1	-	127573520	127580146	789624	12	643,81,103,61,111,80,73,87,133,142,183,206,	0,2039,2257,2603,2794,3471,3675,3844,6594,6876,17264,17737,
#Deleted in new
chr3	127574977	127575683	chr3:127574977-127575683	0	-	127574977	127574977	8553170	2	288,281,	0,425,
#Deleted in new
chr3	127575265	127575331	chr3:127575265-127575331	3	-	127575265	127575265	5263520	1	66,	0,
#Partially deleted in new
chr3	127575937	127591095	chr3:127575937-127591095	0	-	127575937	127580146	789624	7	113,80,73,87,133,142,213,	0,679,883,1052,3802,4084,14945,
#Partially deleted in new
chr3	127575939	127590699	chr3:127575939-127590699	0	-	127575939	127580146	789624	8	111,80,73,87,133,142,91,290,	0,677,881,1050,3800,4082,12130,14470,
#Partially deleted in new
chr3	127576615	127598251	chr3:127576615-127598251	0	-	127576615	127580146	789624	8	81,73,87,133,142,61,134,56,	0,205,374,3124,3406,15274,18184,21580,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	127580021	127598204	chr3:127580021-127598204	0	-	127580021	127580146	789624	4	142,134,239,198,	0,14778,15430,17985,
#Partially deleted in new
chr3	127587110	127587176	chr3:127587110-127587176	3	-	127587110	127587110	5263520	1	66,	0,
#Partially deleted in new
chr3	127598222	127622436	chr3:127598222-127622436	3	+	127598466	127621773	0	16	250,230,176,261,220,208,135,192,94,251,127,113,252,183,156,774,	0,1095,6385,6673,7895,8387,10159,10609,17639,18645,19056,19746,20804,22475,22850,23440,
#Partially deleted in new
chr3	127598409	127621829	chr3:127598409-127621829	0	+	127598466	127604905	789624	16	63,230,176,280,220,208,135,192,94,251,127,113,252,183,156,167,	0,908,6198,6467,7708,8200,9972,10422,17452,18458,18869,19559,20617,22288,22663,23253,
#Partially deleted in new
chr3	127598861	127604783	chr3:127598861-127604783	0	+	127599338	127604783	789624	3	287,230,176,	0,456,5746,
#Partially deleted in new
chr3	127599101	127604708	chr3:127599101-127604708	0	+	127599338	127604708	789624	2	446,101,	0,5506,
#Partially deleted in new
chr3	127599478	127621829	chr3:127599478-127621829	0	+	127599478	127604905	789624	14	69,176,280,220,208,135,192,94,251,127,252,183,156,167,	0,5129,5398,6639,7131,8903,9353,16383,17389,17800,19548,21219,21594,22184,
#Partially deleted in new
chr3	127604250	127606202	chr3:127604250-127606202	0	+	127604250	127604250	8553170	4	35,176,261,85,	0,357,645,1867,
#Partially deleted in new
chr3	127604895	127622107	chr3:127604895-127622107	0	+	127604895	127621773	789624	14	261,220,208,135,192,207,94,251,127,113,252,183,156,445,	0,1222,1714,3486,3936,5883,10966,11972,12383,13073,14131,15802,16177,16767,
#Deleted in new
chr3	127616977	127617821	chr3:127616977-127617821	0	+	127616977	127616977	8553170	2	141,543,	0,301,
#Partially deleted in new
chr3	127617710	127621776	chr3:127617710-127621776	0	+	127617710	127617710	8553170	5	371,252,183,156,114,	0,1316,2987,3362,3952,
#Partially deleted in new
chr3	127629180	127672809	chr3:127629180-127672809	3	+	127629219	127672480	789624	8	109,279,782,75,157,62,180,542,	0,10064,31197,33056,39260,39960,42253,43087,
#Partially deleted in new
chr3	127672934	127677026	chr3:127672934-127677026	0	+	127673025	127676003	789624	6	147,28,56,145,160,491,	0,1456,1610,3035,3337,3601,
#Partially deleted in new
chr3	127672939	127680917	chr3:127672939-127680917	3	+	127673025	127680475	789624	12	142,63,56,145,160,46,117,119,99,168,201,649,	0,1451,1605,3030,3332,3596,4027,4228,4525,4736,7045,7329,
#Partially deleted in new
chr3	127672946	127677073	chr3:127672946-127677073	0	+	127672946	127672946	8553170	6	135,74,56,145,160,538,	0,1398,1598,3023,3325,3589,
#Partially deleted in new
chr3	127672951	127676435	chr3:127672951-127676435	0	+	127672951	127672951	8553170	4	130,63,56,466,	0,1439,1593,3018,
#Partially deleted in new
chr3	127672957	127680920	chr3:127672957-127680920	1	+	127676377	127680475	789624	12	124,74,56,145,160,46,117,119,99,168,201,652,	0,1387,1587,3012,3314,3578,4009,4210,4507,4718,7027,7311,
#Partially deleted in new
chr3	127672957	127680920	chr3:127672957-127680920	0	+	127673025	127676003	789624	12	124,28,56,145,160,46,117,119,99,168,201,652,	0,1433,1587,3012,3314,3578,4009,4210,4507,4718,7027,7311,
#Deleted in new
chr3	127673013	127674601	chr3:127673013-127674601	0	+	127673013	127673013	8553170	3	595,63,57,	0,1377,1531,
#Partially deleted in new
chr3	127673033	127676809	chr3:127673033-127676809	0	+	127673033	127673033	8553170	6	48,63,56,145,160,274,	0,1357,1511,2936,3238,3502,
#Partially deleted in new
chr3	127673305	127677193	chr3:127673305-127677193	0	+	127673305	127673305	8553170	8	78,63,56,145,160,46,117,26,	0,1085,1239,2664,2966,3230,3661,3862,
#Partially deleted in new
chr3	127674109	127680913	chr3:127674109-127680913	1	+	127676377	127680475	789624	11	309,56,145,160,46,117,119,99,168,201,645,	0,435,1860,2162,2426,2857,3058,3355,3566,5875,6159,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	127675485	127680911	chr3:127675485-127680911	0	+	127675485	127675485	8553170	4	946,751,2721,643,	0,1050,1979,4783,
#Partially deleted in new
chr3	127676084	127680065	chr3:127676084-127680065	0	+	127676084	127676084	8553170	6	30,160,46,117,37,81,	0,187,451,882,1722,3900,
#Partially deleted in new
chr3	127676535	127680057	chr3:127676535-127680057	0	+	127676535	127676535	8553170	4	46,320,379,73,	0,431,929,3449,
#Partially deleted in new
chr3	127676971	127680057	chr3:127676971-127680057	0	+	127676971	127676971	8553170	4	112,119,379,73,	0,196,493,3013,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	127677176	127680063	chr3:127677176-127680063	0	+	127677176	127679620	789624	5	110,99,168,107,79,	0,288,499,2396,2808,
#Partially deleted in new
chr3	127689061	127822882	chr3:127689061-127822882	1	-	127692197	127822318	789624	8	3262,216,90,111,137,107,145,574,	0,5913,21514,31991,33368,92727,132632,133247,
#Partially deleted in new
chr3	127689061	127823250	chr3:127689061-127823250	3	-	127692197	127821818	0	8	3262,216,90,111,137,107,145,167,	0,5913,21514,31991,33368,92727,132632,134022,
#Partially deleted in new
chr3	127689061	127822882	chr3:127689061-127822882	1	-	127692197	127822318	0	7	3262,216,111,137,107,145,574,	0,5913,31991,33368,92727,132632,133247,
#Partially deleted in new
chr3	127689065	127823185	chr3:127689065-127823185	1	-	127692197	127821818	0	8	3258,216,90,111,137,107,145,877,	0,5909,21510,31987,33364,92723,132628,133243,
#Partially deleted in new
chr3	127692110	127721171	chr3:127692110-127721171	0	-	127692197	127721171	789624	5	213,216,90,78,119,	0,2864,18465,23742,28942,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	127692111	127714146	chr3:127692111-127714146	0	-	127692111	127692111	8553170	3	212,216,3571,	0,2863,18464,
#Partially deleted in new
chr3	127692116	127736357	chr3:127692116-127736357	1	-	127692197	127735858	789624	6	207,216,90,111,137,653,	0,2858,18459,28936,30313,43588,
#Partially deleted in new
chr3	127692116	127722570	chr3:127692116-127722570	0	-	127692197	127722570	789624	4	207,90,111,141,	0,18459,28936,30313,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr3	127692131	128052190	chr3:127692131-128052190	1	-	127693198	127821818	8553170	13	192,236,216,90,111,137,107,145,217,865,83,117,229,	0,834,2843,18444,28921,30298,89657,129562,133534,138049,161937,351955,359830,
#Partially deleted in new
chr3	127692138	127722570	chr3:127692138-127722570	0	-	127692197	127722570	789624	4	185,216,111,141,	0,2836,28914,30291,
#Partially deleted in new
chr3	127710619	127799464	chr3:127710619-127799464	0	-	127710619	127710619	8553170	5	46,111,137,107,45,	0,10433,11810,71169,88800,
#Partially deleted in new
chr3	127715473	127823185	chr3:127715473-127823185	0	-	127715473	127715473	8553170	6	457,111,137,107,145,102,	0,5579,6956,66315,106220,107610,
#Partially deleted in new
chr3	127721075	127784008	chr3:127721075-127784008	0	-	127721075	127781831	789624	4	88,137,107,224,	0,1354,60713,62709,
#Partially deleted in new
chr3	127722549	127791261	chr3:127722549-127791261	0	-	127722549	127722549	8553170	3	17,107,62,	0,59239,68650,
#Partially deleted in new
chr3	127781788	127822143	chr3:127781788-127822143	0	-	127781788	127821818	789624	3	107,145,158,	0,39905,40197,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	127915231	127987666	chr3:127915231-127987666	3	+	127923061	127984278	789624	6	355,1182,271,151,198,3570,	0,7718,12532,14901,47957,68865,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	127915474	127987666	chr3:127915474-127987666	1	+	127927872	127984278	789624	5	112,271,151,198,3570,	0,12289,14658,47714,68622,
#Partially deleted in new
chr3	127915474	127984337	chr3:127915474-127984337	0	+	127915474	127915474	8553170	3	112,198,241,	0,47714,68622,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	127923058	127987671	chr3:127923058-127987671	1	+	127923061	127984278	789624	5	1073,271,151,198,3575,	0,4705,7074,40130,61038,
#Partially deleted in new
chr3	127923060	127928120	chr3:127923060-127928120	0	+	127923060	127923060	8553170	2	1071,357,	0,4703,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	127923412	127987662	chr3:127923412-127987662	1	+	127927768	127984278	789624	5	135,71,151,198,3566,	0,4351,6720,39776,60684,
#Partially deleted in new
chr3	127924080	127984298	chr3:127924080-127984298	0	+	127924080	127924080	8553170	4	51,151,198,202,	0,6052,39108,60016,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	127963607	127963724	chr3:127963607-127963724	7	+	127963607	127963607	16724991	1	117,	0,
#Partially deleted in new
chr3	128051640	128069839	chr3:128051640-128069839	1	+	128051885	128069662	789624	12	270,68,66,79,132,110,154,161,198,192,77,364,	0,1194,3875,4032,5068,8461,8867,13236,15313,15780,16342,17835,
#Partially deleted in new
chr3	128052368	128071682	chr3:128052368-128071682	3	+	128052552	128069662	789624	12	191,68,66,79,132,110,154,161,198,192,77,2207,	0,466,3147,3304,4340,7733,8139,12508,14585,15052,15614,17107,
#Partially deleted in new
chr3	128052425	128060211	chr3:128052425-128060211	0	+	128055690	128060211	789624	5	134,66,79,132,110,	0,3090,3247,4283,7676,
#Deleted in new
chr3	128052488	128055750	chr3:128052488-128055750	0	+	128052488	128052488	8553170	3	414,66,78,	0,3027,3184,
#Partially deleted in new
chr3	128052758	128071677	chr3:128052758-128071677	1	+	128060109	128069662	789624	8	144,110,154,161,198,192,77,2202,	0,7343,7749,12118,14195,14662,15224,16717,
#Partially deleted in new
chr3	128064777	128097496	chr3:128064777-128097496	0	-	128068909	128097496	789624	5	443,278,92,103,197,	0,3858,17705,22928,32522,
#Partially deleted in new
chr3	128064781	128101619	chr3:128064781-128101619	0	-	128065027	128101619	789624	5	439,199,64,150,61,	0,32518,34100,35813,36777,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	128064784	128153914	chr3:128064784-128153914	1	-	128065211	128119375	789624	10	436,103,199,64,150,90,152,133,87,712,	0,22921,32515,34097,35810,36774,39988,48103,54543,88418,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	128064898	128071683	chr3:128064898-128071683	0	+	128064898	128064898	8553170	7	40,236,95,198,192,77,2208,	0,122,1710,2055,2522,3084,4577,
#Partially deleted in new
chr3	128067780	128069751	chr3:128067780-128069751	0	+	128067780	128067780	8553170	2	279,276,	0,1695,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	128075072	128075249	chr3:128075072-128075249	3	-	128075072	128075072	8553170	1	177,	0,
#Deleted in new
chr3	128075809	128079056	chr3:128075809-128079056	3	+	128075809	128075809	789624	2	270,318,	0,2929,
#Partially deleted in new
chr3	128080959	128123824	chr3:128080959-128123824	3	-	128081249	128123724	0	11	450,92,103,199,64,150,90,152,133,87,241,	0,1523,6746,16340,17922,19635,20599,23813,31928,38368,42624,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	128080960	128085022	chr3:128080960-128085022	0	-	128080960	128080960	8553170	1	4062,	0,
#Partially deleted in new
chr3	128081181	128100744	chr3:128081181-128100744	0	-	128081249	128100744	789624	6	228,92,139,199,64,150,	0,1301,6524,16118,17700,19413,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	128083601	128087795	chr3:128083601-128087795	0	-	128083601	128083601	8553170	2	474,90,	0,4104,
#Partially deleted in new
chr3	128084842	128087811	chr3:128084842-128087811	0	-	128084842	128084842	8553170	2	289,106,	0,2863,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	128141874	128141977	chr3:128141874-128141977	3	-	128141874	128141874	8553170	1	103,	0,
#Partially deleted in new
chr3	128153453	128408646	chr3:128153453-128408646	3	+	128153507	128408259	0	7	370,208,97,165,657,157,578,	0,93382,108674,111163,187779,204763,254615,
#Partially deleted in new
chr3	128153500	128408642	chr3:128153500-128408642	1	+	128153507	128408101	789624	5	323,208,97,657,574,	0,93335,108627,187732,254568,
#Partially deleted in new
chr3	128153667	128341508	chr3:128153667-128341508	0	+	128153667	128153667	8553170	3	156,208,276,	0,93168,187565,
#Partially deleted in new
chr3	128181401	128194452	chr3:128181401-128194452	3	-	128181401	128181401	8553170	2	325,371,	0,12680,
#Partially deleted in new
chr3	128336903	128341788	chr3:128336903-128341788	0	+	128336903	128336903	8553170	2	189,556,	0,4329,
#Partially deleted in new
chr3	128462438	128466968	chr3:128462438-128466968	1	-	128462546	128463245	0	2	1672,1693,	0,2837,
#Partially deleted in new
chr3	128462441	128467248	chr3:128462441-128467248	3	-	128462546	128463245	0	3	1669,161,635,	0,2834,4172,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	128463593	128472317	chr3:128463593-128472317	3	+	128463593	128463593	789624	3	134,214,1450,	0,306,7274,
#Deleted in new
chr3	128479426	128493185	chr3:128479426-128493185	3	-	128481018	128487031	789624	6	1892,126,146,642,274,287,	0,2392,4433,6300,7376,13472,
#Deleted in new
chr3	128480145	128487916	chr3:128480145-128487916	1	-	128481018	128487031	789624	6	1173,84,146,642,274,206,	0,1673,3714,5581,6657,7565,
#Deleted in new
chr3	128480145	128482078	chr3:128480145-128482078	0	-	128480145	128480145	8553170	2	1173,260,	0,1673,
#Deleted in new
chr3	128481018	128488530	chr3:128481018-128488530	1	-	128481018	128487031	789624	7	300,126,146,642,274,211,179,	0,800,2841,4708,5784,6692,7333,
#Deleted in new
chr3	128486147	128490648	chr3:128486147-128490648	0	-	128486147	128487031	789624	3	221,274,349,	0,655,4152,
#Deleted in new
chr3	128487007	128493173	chr3:128487007-128493173	0	-	128487007	128487031	789624	3	69,219,275,	0,4996,5891,
#Partially deleted in new
chr3	128489211	128497366	chr3:128489211-128497366	1	+	128489211	128489211	8553170	3	204,291,668,	0,567,7487,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	128489231	128502348	chr3:128489231-128502348	3	+	128489231	128489231	789624	2	838,740,	0,12377,
#Deleted in new
chr3	128489256	128490086	chr3:128489256-128490086	0	+	128489256	128489256	8553170	2	414,308,	0,522,
#Deleted in new
chr3	128538019	128538631	chr3:128538019-128538631	7	+	128538019	128538019	16724991	1	612,	0,
#Deleted in new
chr3	128573279	128573729	chr3:128573279-128573729	0	-	128573279	128573279	8553170	1	450,	0,
#Partially deleted in new
chr3	128619969	128650849	chr3:128619969-128650849	3	-	128620410	128650800	789624	10	624,246,120,139,100,193,210,307,65,310,	0,2194,5564,5904,6763,9981,11978,17829,24949,30570,
#Partially deleted in new
chr3	128620158	128681075	chr3:128620158-128681075	1	-	128620410	128637915	789624	10	435,246,120,139,100,193,210,307,65,322,	0,2005,5375,5715,6574,9792,11789,17640,24760,60595,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	128625973	128627266	chr3:128625973-128627266	0	-	128625973	128625973	8553170	2	39,534,	0,759,
#Partially deleted in new
chr3	128632120	128651529	chr3:128632120-128651529	0	-	128632120	128632120	8553170	4	37,307,65,157,	0,5678,12798,19252,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	128637819	128642564	chr3:128637819-128642564	0	-	128637819	128637819	8553170	2	286,272,	0,4473,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	128638037	128650820	chr3:128638037-128650820	0	-	128644606	128650800	789624	4	68,112,65,281,	0,6497,6881,12502,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	128641045	128650816	chr3:128641045-128650816	0	-	128641045	128641045	8553170	4	89,116,65,277,	0,3489,3873,9494,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	128644514	128650821	chr3:128644514-128650821	0	-	128644514	128644514	8553170	2	469,282,	0,6025,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	128673680	128674021	chr3:128673680-128674021	3	-	128673680	128673680	8553170	1	341,	0,
#Partially deleted in new
chr3	128674734	128677005	chr3:128674734-128677005	7	-	128674734	128674734	16724991	3	328,178,484,	0,662,1787,
#Partially deleted in new
chr3	128714570	128714705	chr3:128714570-128714705	3	-	128714570	128714570	8553170	1	135,	0,
#Partially deleted in new
chr3	128726121	128814796	chr3:128726121-128814796	3	+	128795367	128813422	0	6	238,61,127,219,129,1470,	0,69238,71821,80250,81421,87205,
#Partially deleted in new
chr3	128726192	128814353	chr3:128726192-128814353	1	+	128795367	128813422	789624	6	167,61,127,78,129,1027,	0,69167,71750,80179,81350,87134,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	128726351	128798425	chr3:128726351-128798425	0	+	128726351	128726351	8553170	3	8,61,483,	0,69008,71591,
#Deleted in new
chr3	128748537	128749489	chr3:128748537-128749489	7	-	128748537	128748537	16724991	1	952,	0,
#Deleted in new
chr3	128764465	128765018	chr3:128764465-128765018	7	-	128764465	128764465	16724991	1	553,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	128785146	128785448	chr3:128785146-128785448	3	+	128785146	128785146	8553170	1	302,	0,
#Partially deleted in new
chr3	128795242	128807594	chr3:128795242-128807594	0	+	128795367	128807594	789624	4	178,127,219,52,	0,2700,11129,12300,
#Partially deleted in new
chr3	128795358	128813541	chr3:128795358-128813541	1	+	128795367	128813422	789624	4	62,127,129,215,	0,2584,12184,17968,
#Partially deleted in new
chr3	128795358	128813644	chr3:128795358-128813644	1	+	128795367	128813422	789624	3	62,127,318,	0,2584,17968,
#Partially deleted in new
chr3	128795358	128807616	chr3:128795358-128807616	0	+	128795367	128807616	789624	4	62,127,104,66,	0,2584,11013,12192,
#Partially deleted in new
chr3	128795358	128813445	chr3:128795358-128813445	1	+	128795367	128813422	789624	4	62,94,54,119,	0,2584,12259,17968,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	128798840	128799201	chr3:128798840-128799201	7	-	128798840	128798840	16724991	1	361,	0,
#Deleted in new
chr3	128843563	128844404	chr3:128843563-128844404	7	-	128843563	128843563	16724991	1	841,	0,
#Deleted in new
chr3	128848672	128849399	chr3:128848672-128849399	7	-	128848672	128848672	16724991	1	727,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	128852111	128853008	chr3:128852111-128853008	7	-	128852111	128852111	16724991	1	897,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	128859715	128860526	chr3:128859715-128860526	3	-	128859715	128859715	8553170	1	811,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	128861312	128871540	chr3:128861312-128871540	3	-	128861312	128861312	789624	5	610,165,113,190,220,	0,3969,6501,8291,10008,
#Partially deleted in new
chr3	128861545	128865604	chr3:128861545-128865604	0	-	128861545	128861545	8553170	2	377,323,	0,3736,
#Deleted in new
chr3	128869623	128870026	chr3:128869623-128870026	7	+	128869623	128869623	16724991	2	172,157,	0,246,
#Partially deleted in new
chr3	128879595	128884689	chr3:128879595-128884689	0	+	128879595	128879595	8553170	2	516,37,	0,5057,
#Partially deleted in new
chr3	128879603	128899400	chr3:128879603-128899400	0	+	128879691	128893614	789624	7	238,90,102,107,101,79,114,	0,5053,13951,15706,16832,18028,19683,
#Partially deleted in new
chr3	128879610	128913114	chr3:128879610-128913114	3	+	128879691	128912607	789624	18	231,94,102,107,101,79,175,74,76,71,120,129,80,127,78,129,73,608,	0,5042,13944,15699,16825,18021,19676,21665,22942,24451,24775,26510,28574,29362,29733,30410,31130,32896,
#Partially deleted in new
chr3	128879619	128899339	chr3:128879619-128899339	0	+	128879691	128893614	789624	7	222,72,102,107,101,79,53,	0,5055,13935,15690,16816,18012,19667,
#Partially deleted in new
chr3	128879622	128908624	chr3:128879622-128908624	0	+	128879691	128893614	789624	12	219,102,107,101,79,175,74,76,71,120,129,440,	0,13932,15687,16813,18009,19664,21653,22930,24439,24763,26498,28562,
#Partially deleted in new
chr3	128879622	128912927	chr3:128879622-128912927	0	+	128879691	128879973	789624	18	395,94,102,107,101,79,175,74,76,71,120,129,80,127,78,129,73,421,	0,5030,13932,15687,16813,18009,19664,21653,22930,24439,24763,26498,28562,29350,29721,30398,31118,32884,
#Partially deleted in new
chr3	128879628	128896466	chr3:128879628-128896466	0	+	128879691	128896466	789624	5	213,94,138,107,31,	0,5024,13890,15681,16807,
#Partially deleted in new
chr3	128879628	128893601	chr3:128879628-128893601	0	+	128879691	128879973	789624	3	389,94,63,	0,5024,13910,
#Partially deleted in new
chr3	128879645	128913014	chr3:128879645-128913014	0	+	128879691	128879973	789624	17	372,102,107,101,79,175,74,76,71,120,129,80,127,78,129,73,508,	0,13909,15664,16790,17986,19641,21630,22907,24416,24740,26475,28539,29327,29698,30375,31095,32861,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	128897652	128913104	chr3:128897652-128913104	0	+	128897652	128897652	8553170	14	58,76,175,74,80,71,148,129,80,127,78,129,73,598,	0,778,1634,3623,4900,6409,6705,8468,10532,11320,11691,12368,13088,14854,
#Partially deleted in new
chr3	128899364	128916067	chr3:128899364-128916067	0	+	128899364	128912607	789624	16	97,74,76,71,120,129,80,127,78,129,73,199,134,169,170,146,	0,1911,3188,4697,5021,6756,8820,9608,9979,10656,11376,13142,13438,15265,16001,16557,
#Partially deleted in new
chr3	128904375	128913100	chr3:128904375-128913100	0	+	128904375	128904375	8553170	7	130,129,80,127,806,73,594,	0,1745,3809,4597,4968,6365,8131,
#Partially deleted in new
chr3	128909865	128994076	chr3:128909865-128994076	1	-	128910298	128993304	789624	8	468,147,125,88,141,214,191,1034,	0,61421,65913,67113,68179,77750,78862,83177,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	128909873	128971330	chr3:128909873-128971330	2	-	128969351	128971330	789624	8	460,157,207,229,195,905,94,44,	0,5245,5483,22895,25251,35197,59437,61413,
#Partially deleted in new
chr3	128909873	128994115	chr3:128909873-128994115	1	-	128910298	128993304	789624	16	460,157,207,165,229,195,905,185,147,125,88,141,214,191,294,136,	0,5245,5483,6233,22895,25251,35197,55637,61413,65905,67105,68171,77742,78854,83169,84106,
#Partially deleted in new
chr3	128910272	128935157	chr3:128910272-128935157	0	-	128910298	128935157	789624	6	61,157,207,165,298,33,	0,4846,5084,5834,22427,24852,
#Deleted in new
chr3	128914832	128915060	chr3:128914832-128915060	3	-	128914832	128914832	8553170	1	228,	0,
#Partially deleted in new
chr3	128945578	128965645	chr3:128945578-128965645	0	-	128945578	128945578	8553170	2	397,135,	0,19932,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	128966588	128994115	chr3:128966588-128994115	1	-	128971224	128993304	789624	8	4845,125,88,141,214,191,294,136,	0,9190,10390,11456,21027,22139,26454,27391,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	128970979	128991897	chr3:128970979-128991897	1	-	128971224	128988844	789624	7	454,125,88,141,214,191,419,	0,4799,5999,7065,16636,17748,20499,
#Partially deleted in new
chr3	128971323	128978315	chr3:128971323-128978315	0	-	128971323	128971323	8553170	4	110,125,88,271,	0,4455,5655,6721,
#Partially deleted in new
chr3	128977012	129002690	chr3:128977012-129002690	0	-	128977012	128977012	8553170	5	54,141,214,191,117,	0,1032,10603,11715,25561,
#Partially deleted in new
chr3	129001628	129040742	chr3:129001628-129040742	3	+	129001628	129039848	789624	8	696,284,158,145,166,141,70,1031,	0,2165,29074,31193,32535,35348,37202,38083,
#Partially deleted in new
chr3	129030448	129040740	chr3:129030448-129040740	0	+	129030448	129030448	8553170	6	412,145,166,141,70,1029,	0,2373,3715,6528,8382,9263,
#Deleted in new
chr3	129045762	129046921	chr3:129045762-129046921	7	+	129045762	129045762	16724991	1	1159,	0,
#Partially deleted in new
chr3	129060766	129062406	chr3:129060766-129062406	3	+	129061739	129062273	0	3	84,126,679,	0,727,961,
#Partially deleted in new
chr3	129087568	129121790	chr3:129087568-129121790	1	-	129091095	129121489	0	3	3778,184,505,	0,7417,33717,
#Partially deleted in new
chr3	129087568	129121804	chr3:129087568-129121804	1	-	129091095	129121489	0	4	3778,184,207,61,	0,7417,33717,34175,
#Partially deleted in new
chr3	129087568	129122150	chr3:129087568-129122150	3	-	129091095	129121489	0	4	3778,184,207,46,	0,7417,33717,34536,
#Partially deleted in new
chr3	129087568	129122014	chr3:129087568-129122014	1	-	129091095	129121489	0	4	3778,184,207,34,	0,7417,33717,34412,
#Partially deleted in new
chr3	129087568	129121922	chr3:129087568-129121922	1	-	129091095	129121489	0	4	3778,184,207,24,	0,7417,33717,34330,
#Partially deleted in new
chr3	129087574	129161036	chr3:129087574-129161036	3	-	129095024	129160975	789624	13	3772,184,101,87,122,123,118,113,43,66,52,23,64,	0,7411,42513,42975,46499,47257,52793,58186,69058,69280,70933,71579,73398,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	129090493	129121781	chr3:129090493-129121781	1	-	129092513	129121489	0	4	853,94,184,496,	0,2006,4492,30792,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	129092513	129121804	chr3:129092513-129121804	1	-	129092513	129121489	0	3	80,184,519,	0,2472,28772,
#Partially deleted in new
chr3	129095114	129122801	chr3:129095114-129122801	0	-	129095114	129121489	789624	3	55,207,312,	0,26171,27375,
#Deleted in new
chr3	129123438	129124003	chr3:129123438-129124003	3	+	129123438	129123438	8553170	1	565,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	129127414	129161293	chr3:129127414-129161293	3	-	129130080	129160975	789624	11	2774,87,122,123,118,113,43,66,52,23,321,	0,3135,6659,7417,12953,18346,29218,29440,31093,31739,33558,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	129129373	129161048	chr3:129129373-129161048	1	-	129130080	129160975	789624	12	815,87,122,123,66,118,113,43,66,52,23,76,	0,1176,4700,5458,7757,10994,16387,27259,27481,29134,29780,31599,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	129129373	129156889	chr3:129129373-129156889	0	-	129129373	129129373	8553170	6	815,87,118,113,43,35,	0,1176,10994,16387,27259,27481,
#Deleted in new
chr3	129129790	129130703	chr3:129129790-129130703	0	-	129129790	129129790	8553170	2	398,154,	0,759,
#Partially deleted in new
chr3	129129878	129145874	chr3:129129878-129145874	0	-	129130183	129145874	789624	5	310,87,123,118,114,	0,671,4953,10489,15882,
#Partially deleted in new
chr3	129130016	129161037	chr3:129130016-129161037	1	-	129130183	129160975	789624	11	172,87,122,127,118,113,43,66,52,23,65,	0,533,4057,4811,10351,15744,26616,26838,28491,29137,30956,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	129134074	129161028	chr3:129134074-129161028	0	-	129144114	129160975	789624	10	121,123,118,122,113,43,66,52,23,56,	0,757,6293,9993,11686,22558,22780,24433,25079,26898,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	129163605	129163940	chr3:129163605-129163940	3	-	129163605	129163605	8553170	1	335,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	129169483	129183922	chr3:129169483-129183922	3	-	129170452	129171757	789624	5	1087,199,93,138,147,	0,1595,1962,2150,14292,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	129169483	129183905	chr3:129169483-129183905	1	-	129170452	129171757	789624	5	1087,199,93,117,130,	0,1595,1962,2171,14292,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	129169486	129183899	chr3:129169486-129183899	1	-	129170452	129171757	789624	5	1084,205,93,117,124,	0,1592,1959,2168,14289,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	129169486	129183899	chr3:129169486-129183899	1	-	129170452	129171757	789624	5	1084,202,93,138,124,	0,1592,1959,2147,14289,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	129169568	129183910	chr3:129169568-129183910	1	-	129170452	129171757	789624	5	1002,199,63,117,135,	0,1510,1877,2086,14207,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	129169568	129183922	chr3:129169568-129183922	1	-	129170452	129171757	789624	5	1002,199,63,138,147,	0,1510,1877,2065,14207,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	129170101	129183910	chr3:129170101-129183910	1	-	129170452	129171757	789624	5	469,205,93,138,135,	0,977,1344,1532,13674,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	129170231	129183864	chr3:129170231-129183864	0	-	129170231	129170231	8553170	4	339,460,138,89,	0,847,1402,13544,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	129171167	129183922	chr3:129171167-129183922	0	-	129171167	129171757	789624	4	142,93,120,147,	0,278,484,12608,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	129171251	129183896	chr3:129171251-129183896	0	-	129171251	129171251	8553170	2	520,121,	0,12524,
#Partially deleted in new
chr3	129218092	129218350	chr3:129218092-129218350	7	-	129218092	129218092	16724991	1	258,	0,
#Partially deleted in new
chr3	129249605	129277773	chr3:129249605-129277773	3	+	129249709	129277424	0	24	141,53,81,72,80,76,93,87,158,134,68,189,96,244,76,104,126,69,143,172,98,139,99,480,	0,1076,2675,3017,3270,5062,5379,6462,7864,8121,10727,11013,14298,15943,17418,18331,18889,19326,22161,22638,23201,25232,25588,27688,
#Partially deleted in new
chr3	129249626	129253098	chr3:129249626-129253098	0	+	129249626	129249626	8553170	4	120,53,81,476,	0,1055,2654,2996,
#Partially deleted in new
chr3	129249631	129277771	chr3:129249631-129277771	0	+	129249631	129249631	8553170	23	115,53,81,333,76,93,87,158,134,68,189,96,244,76,104,126,69,143,172,98,139,99,478,	0,1050,2649,2991,5036,5353,6436,7838,8095,10701,10987,14272,15917,17392,18305,18863,19300,22135,22612,23175,25206,25562,27662,
#Partially deleted in new
chr3	129249652	129255040	chr3:129249652-129255040	0	+	129249709	129250794	789624	7	94,213,81,72,80,76,56,	0,1029,2628,2970,3223,5015,5332,
#Partially deleted in new
chr3	129254326	129255039	chr3:129254326-129255039	0	+	129254326	129254326	8553170	2	417,55,	0,658,
#Partially deleted in new
chr3	129260226	129265675	chr3:129260226-129265675	0	+	129260226	129260226	8553170	4	174,189,96,127,	0,392,3677,5322,
#Partially deleted in new
chr3	129263910	129267235	chr3:129263910-129267235	0	+	129263910	129263910	8553170	3	89,244,212,	0,1638,3113,
#Partially deleted in new
chr3	129265751	129277457	chr3:129265751-129277457	0	+	129265751	129277424	789624	6	31,68,98,139,99,164,	0,6596,7055,9086,9442,11542,
#Deleted in new
chr3	129272145	129272243	chr3:129272145-129272243	3	+	129272145	129272145	5263520	1	98,	0,
#Partially deleted in new
chr3	129272295	129277498	chr3:129272295-129277498	0	+	129272295	129274075	789624	6	120,98,73,139,99,205,	0,511,1768,2542,2898,4998,
#Partially deleted in new
chr3	129272852	129275183	chr3:129272852-129275183	0	+	129272852	129272852	8553170	2	52,346,	0,1985,
#Partially deleted in new
chr3	129278827	129304751	chr3:129278827-129304751	0	+	129279732	129304751	789624	6	78,206,126,182,193,163,	0,882,11851,19526,23122,25761,
#Partially deleted in new
chr3	129278839	129306186	chr3:129278839-129306186	3	+	129279732	129304825	0	7	66,206,144,126,182,193,1598,	0,870,10014,11839,19514,23110,25749,
#Partially deleted in new
chr3	129278845	129305293	chr3:129278845-129305293	1	+	129279732	129304825	789624	6	60,206,144,182,193,705,	0,864,10008,19508,23104,25743,
#Partially deleted in new
chr3	129278879	129302134	chr3:129278879-129302134	0	+	129279732	129302134	789624	4	26,206,182,185,	0,830,19474,23070,
#Partially deleted in new
chr3	129278955	129305441	chr3:129278955-129305441	1	+	129279732	129304825	0	7	248,206,144,126,182,193,853,	0,754,9898,11723,19398,22994,25633,
#Partially deleted in new
chr3	129278973	129305262	chr3:129278973-129305262	1	+	129279732	129304825	0	7	238,206,144,126,182,193,674,	0,736,9880,11705,19380,22976,25615,
#Partially deleted in new
chr3	129278992	129302014	chr3:129278992-129302014	0	+	129279732	129302014	789624	6	51,206,144,126,182,65,	0,717,9861,11686,19361,22957,
#Partially deleted in new
chr3	129279004	129302005	chr3:129279004-129302005	0	+	129279732	129302005	789624	4	199,206,182,56,	0,705,19349,22945,
#Deleted in new
chr3	129314770	129316277	chr3:129314770-129316277	3	-	129315260	129315902	0	1	1507,	0,
#Deleted in new
chr3	129315391	129318311	chr3:129315391-129318311	1	+	129315391	129315391	8553170	4	247,98,192,380,	0,414,1762,2540,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	129315519	129324547	chr3:129315519-129324547	0	+	129315519	129315519	8553170	2	119,367,	0,8661,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	129318105	129326225	chr3:129318105-129326225	3	+	129318105	129318105	8553170	4	205,95,255,2045,	0,437,5244,6075,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	129318235	129324569	chr3:129318235-129324569	1	+	129318235	129318235	8553170	5	75,95,255,108,389,	0,307,5114,5654,5945,
#Partially deleted in new
chr3	129323045	129325426	chr3:129323045-129325426	7	-	129323045	129323045	16724991	3	129,149,110,	0,782,2271,
#Deleted in new
chr3	129334585	129335074	chr3:129334585-129335074	7	+	129334585	129334585	16724991	1	489,	0,
#Deleted in new
chr3	129345410	129346164	chr3:129345410-129346164	7	+	129345410	129345410	16724991	1	754,	0,
#Partially deleted in new
chr3	129381297	129394149	chr3:129381297-129394149	7	+	129381297	129381297	16724991	5	139,67,64,138,109,	0,3907,7956,11996,12743,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	129382921	129397136	chr3:129382921-129397136	5	-	129382921	129382921	16724991	3	1297,161,97,	0,10713,14118,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	129382921	129399405	chr3:129382921-129399405	7	-	129382921	129382921	16724991	5	1297,161,204,101,398,	0,10713,13295,14118,16086,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	129391154	129399419	chr3:129391154-129399419	4	-	129391154	129391154	16724991	4	2142,161,101,412,	0,2480,5885,7853,
#Partially deleted in new
chr3	129393171	129396293	chr3:129393171-129396293	4	-	129393171	129393171	16724991	3	125,161,77,	0,463,3045,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	129393606	129399419	chr3:129393606-129399419	4	-	129393606	129393606	16724991	3	189,101,412,	0,3433,5401,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	129393634	129399439	chr3:129393634-129399439	4	-	129393634	129393634	16724991	2	161,432,	0,5373,
#Partially deleted in new
chr3	129396195	129399655	chr3:129396195-129399655	5	-	129396195	129396195	16724991	4	225,101,115,57,	0,844,3185,3403,
#Partially deleted in new
chr3	129396217	129397109	chr3:129396217-129397109	5	-	129396217	129396217	16724991	2	208,67,	0,825,
#Partially deleted in new
chr3	129397209	129397348	chr3:129397209-129397348	3	-	129397209	129397209	789624	1	139,	0,
#Partially deleted in new
chr3	129401320	129428651	chr3:129401320-129428651	3	-	129401592	129428488	789624	9	531,57,154,214,197,157,195,437,212,	0,1202,2929,7324,9837,13924,16933,20046,27119,
#Partially deleted in new
chr3	129401321	129428651	chr3:129401321-129428651	1	-	129401592	129428488	789624	9	530,56,155,214,197,157,195,437,212,	0,1201,2927,7323,9836,13923,16932,20045,27118,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	129401321	129418523	chr3:129401321-129418523	0	-	129401321	129401321	8553170	6	530,1881,214,197,157,270,	0,1201,7323,9836,13923,16932,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	129401325	129421583	chr3:129401325-129421583	0	-	129401325	129401325	8553170	7	526,57,154,214,4244,195,217,	0,1197,2924,7319,9832,16928,20041,
#Partially deleted in new
chr3	129411266	129428617	chr3:129411266-129428617	0	-	129411266	129428475	789624	4	88,157,195,178,	0,3978,6987,17173,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	129430943	129440029	chr3:129430943-129440029	1	-	129431500	129439833	0	8	635,104,150,135,75,848,231,300,	0,1559,2154,2906,3118,5517,6776,8786,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	129430949	129440009	chr3:129430949-129440009	3	-	129431500	129439833	0	8	629,104,150,135,75,866,231,280,	0,1553,2148,2900,3112,5493,6770,8780,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	129430951	129440179	chr3:129430951-129440179	1	-	129431500	129439833	0	7	627,104,150,135,75,143,450,	0,1551,2146,2898,3110,6856,8778,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	129431265	129440007	chr3:129431265-129440007	1	-	129431567	129439833	0	8	313,51,150,135,75,866,231,278,	0,1290,1832,2584,2796,5177,6454,8464,
#Partially deleted in new
chr3	129431454	129439927	chr3:129431454-129439927	0	-	129433192	129439833	789624	4	124,104,150,198,	0,1048,1643,8275,
#Partially deleted in new
chr3	129432175	129440035	chr3:129432175-129440035	1	-	129432448	129439833	0	7	431,150,135,75,866,231,306,	0,922,1674,1886,4267,5544,7554,
#Deleted in new
chr3	129432532	129433553	chr3:129432532-129433553	0	-	129432532	129432532	8553170	2	74,456,	0,565,
#Deleted in new
chr3	129432576	129434103	chr3:129432576-129434103	0	-	129432576	129432576	8553170	3	30,150,254,	0,521,1273,
#Partially deleted in new
chr3	129433858	129439940	chr3:129433858-129439940	0	-	129433858	129433858	8553170	4	126,75,231,211,	0,203,3861,5871,
#Partially deleted in new
chr3	129437046	129439937	chr3:129437046-129439937	0	-	129437046	129437046	8553170	3	262,143,208,	0,761,2683,
#Partially deleted in new
chr3	129440035	129520507	chr3:129440035-129520507	1	+	129464668	129520265	789624	31	336,67,85,151,79,77,67,147,177,76,192,139,203,138,165,198,141,54,162,167,172,103,141,95,101,166,112,126,80,165,332,	0,9835,11878,16078,18563,21192,23524,24599,26854,29306,36279,36627,37980,39749,41494,43449,48221,52105,55410,59866,62675,64283,66373,67632,72276,74353,75452,77433,79071,79532,80140,
#Partially deleted in new
chr3	129440035	129520507	chr3:129440035-129520507	1	+	129464668	129520265	789624	28	336,67,85,77,67,147,76,192,139,203,138,165,198,141,54,162,167,172,103,141,95,101,166,112,126,80,165,332,	0,9835,11878,21192,23524,24599,29306,36279,36627,37980,39749,41494,43449,48221,52105,55410,59866,62675,64283,66373,67632,72276,74353,75452,77433,79071,79532,80140,
#Partially deleted in new
chr3	129440124	129520351	chr3:129440124-129520351	1	+	129440330	129520265	789624	29	247,67,85,79,77,67,147,76,192,139,203,138,165,198,141,54,162,167,172,103,141,95,101,166,112,126,80,165,176,	0,9746,11789,18474,21103,23435,24510,29217,36190,36538,37891,39660,41405,43360,48132,52016,55321,59777,62586,64194,66284,67543,72187,74264,75363,77344,78982,79443,80051,
#Partially deleted in new
chr3	129440138	129520345	chr3:129440138-129520345	3	+	129440330	129520265	789624	31	233,67,85,79,153,77,67,147,177,76,192,139,203,138,165,198,141,54,162,167,172,103,141,95,101,166,112,126,80,165,170,	0,9732,11775,18460,20715,21089,23421,24496,26751,29203,36176,36524,37877,39646,41391,43346,48118,52002,55307,59763,62572,64180,66270,67529,72173,74250,75349,77330,78968,79429,80037,
#Partially deleted in new
chr3	129440211	129520265	chr3:129440211-129520265	1	+	129440330	129520265	789624	30	160,67,85,79,153,77,67,147,76,192,139,203,138,165,198,141,54,162,167,172,103,141,98,101,166,112,126,80,165,90,	0,9659,11702,18387,20642,21016,23348,24423,29130,36103,36451,37804,39573,41318,43273,48045,51929,55234,59690,62499,64107,66197,67453,72100,74177,75276,77257,78895,79356,79964,
#Partially deleted in new
chr3	129440232	129520347	chr3:129440232-129520347	0	+	129440330	129456163	789624	31	139,67,85,151,79,77,67,147,177,76,192,139,203,138,165,198,141,54,162,167,172,103,141,95,101,166,112,126,80,165,172,	0,9638,11681,15881,18366,20995,23327,24402,26657,29109,36082,36430,37783,39552,41297,43252,48024,51908,55213,59669,62478,64086,66176,67435,72079,74156,75255,77236,78874,79335,79943,
#Partially deleted in new
chr3	129440236	129520355	chr3:129440236-129520355	1	+	129440330	129520265	789624	26	135,67,85,82,147,76,192,139,203,138,165,198,141,162,167,172,103,141,98,101,166,112,126,80,165,180,	0,9634,11677,23308,24398,29105,36078,36426,37779,39548,41293,43248,48020,55209,59665,62474,64082,66172,67428,72075,74152,75251,77232,78870,79331,79939,
#Partially deleted in new
chr3	129440243	129520351	chr3:129440243-129520351	1	+	129440330	129520265	789624	27	128,67,85,67,147,76,192,139,203,138,165,198,141,54,162,167,172,103,141,98,101,166,112,126,80,165,176,	0,9627,11670,23316,24391,29098,36071,36419,37772,39541,41286,43241,48013,51897,55202,59658,62467,64075,66165,67421,72068,74145,75244,77225,78863,79324,79932,
#Partially deleted in new
chr3	129440253	129520339	chr3:129440253-129520339	1	+	129440330	129520265	789624	30	118,67,85,79,77,67,147,177,76,192,139,203,138,165,198,141,54,162,167,172,103,141,95,101,166,112,126,80,165,164,	0,9617,11660,18345,20974,23306,24381,26636,29088,36061,36409,37762,39531,41276,43231,48003,51887,55192,59648,62457,64065,66155,67414,72058,74135,75234,77215,78853,79314,79922,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr3	129449869	129520355	chr3:129449869-129520355	0	+	129449869	129449869	8553170	27	68,85,79,77,67,147,76,192,139,203,138,165,198,141,54,162,167,172,103,141,95,101,1211,126,80,165,180,	0,2044,8729,11358,13690,14765,19472,26445,26793,28146,29915,31660,33615,38387,42271,45576,50032,52841,54449,56539,57798,62442,64519,67599,69237,69698,70306,
#Partially deleted in new
chr3	129449870	129463622	chr3:129449870-129463622	0	+	129449870	129456163	789624	5	67,85,151,79,63,	0,2043,6243,8728,13689,
#Partially deleted in new
chr3	129449870	129452210	chr3:129449870-129452210	0	+	129449870	129449870	8553170	2	67,297,	0,2043,
#Partially deleted in new
chr3	129449870	129464693	chr3:129449870-129464693	0	+	129449870	129464693	789624	5	67,59,77,67,59,	0,2043,11357,13689,14764,
#Partially deleted in new
chr3	129449870	129464694	chr3:129449870-129464694	0	+	129449870	129458670	789624	5	67,79,77,67,60,	0,8728,11357,13689,14764,
#Partially deleted in new
chr3	129449870	129476508	chr3:129449870-129476508	0	+	129449870	129449870	8553170	4	67,85,76,194,	0,2043,19471,26444,
#Partially deleted in new
chr3	129449870	129476753	chr3:129449870-129476753	0	+	129449870	129476753	789624	8	67,85,79,77,67,76,192,91,	0,2043,8728,11357,13689,19471,26444,26792,
#Partially deleted in new
chr3	129449870	129463626	chr3:129449870-129463626	0	+	129449870	129463626	789624	4	67,85,77,67,	0,2043,11357,13689,
#Partially deleted in new
chr3	129449870	129479917	chr3:129449870-129479917	0	+	129449870	129479917	789624	8	67,85,67,76,192,139,203,133,	0,2043,13689,19471,26444,26792,28145,29914,
#Partially deleted in new
chr3	129461308	129476415	chr3:129461308-129476415	0	+	129464668	129476415	789624	5	193,67,147,76,101,	0,2251,3326,8033,15006,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	129463120	129464690	chr3:129463120-129464690	0	+	129463120	129463120	8553170	2	506,56,	0,1514,
#Partially deleted in new
chr3	129476138	129478073	chr3:129476138-129478073	0	+	129476138	129476138	8553170	3	368,139,58,	0,524,1877,
#Partially deleted in new
chr3	129479889	129504421	chr3:129479889-129504421	0	+	129479889	129504421	789624	8	33,165,198,141,162,167,172,103,	0,1640,3595,8367,15556,20012,22821,24429,
#Deleted in new
chr3	129481380	129483837	chr3:129481380-129483837	0	+	129481380	129481380	8553170	2	314,353,	0,2104,
#Partially deleted in new
chr3	129481508	129495487	chr3:129481508-129495487	0	+	129481508	129481508	8553170	4	186,198,141,42,	0,1976,6748,13937,
#Deleted in new
chr3	129481529	129483892	chr3:129481529-129483892	0	+	129481529	129481529	8553170	2	165,408,	0,1955,
#Partially deleted in new
chr3	129487505	129520355	chr3:129487505-129520355	0	+	129487505	129487505	8553170	15	422,141,54,167,172,103,141,95,101,166,112,126,80,165,180,	0,751,4635,12396,15205,16813,18903,20162,24806,26883,27982,29963,31601,32062,32670,
#Partially deleted in new
chr3	129488190	129502764	chr3:129488190-129502764	0	+	129488265	129502764	789624	4	207,162,167,54,	0,7255,11711,14520,
#Partially deleted in new
chr3	129495449	129504033	chr3:129495449-129504033	0	+	129495449	129495449	8553170	4	158,167,172,56,	0,4452,7261,8528,
#Partially deleted in new
chr3	129512357	129520349	chr3:129512357-129520349	0	+	129512357	129512357	8553170	6	2197,112,126,80,165,174,	0,3130,5111,6749,7210,7818,
#Deleted in new
chr3	129512380	129514820	chr3:129512380-129514820	0	+	129512380	129512380	8553170	2	32,432,	0,2008,
#Deleted in new
chr3	129528639	129535169	chr3:129528639-129535169	3	+	129528733	129533718	0	5	455,169,166,240,1562,	0,2236,3611,3893,4968,
#Partially deleted in new
chr3	129543213	129551361	chr3:129543213-129551361	3	+	129543218	129551340	789624	5	93,290,364,65,255,	0,4177,5787,7531,7893,
#Partially deleted in new
chr3	129548385	129551467	chr3:129548385-129551467	1	+	129549039	129551340	789624	4	91,364,65,361,	0,615,2359,2721,
#Partially deleted in new
chr3	129555174	129606818	chr3:129555174-129606818	3	-	129556311	129606639	0	36	1254,75,141,148,164,105,35,64,104,157,147,199,131,105,113,108,115,150,264,91,168,140,100,152,155,94,90,105,103,109,178,130,101,132,177,1490,	0,1442,1908,3253,4445,5155,5514,6471,6625,7612,7919,10165,10712,11352,12317,12523,14668,15611,15865,16334,16502,17434,17667,18419,19161,20294,20591,23154,28392,28950,29210,30777,30997,31413,34176,50154,
#Deleted in new
chr3	129555213	129557034	chr3:129555213-129557034	0	-	129555213	129555213	8553170	2	1215,418,	0,1403,
#Deleted in new
chr3	129555213	129558697	chr3:129555213-129558697	0	-	129555213	129555213	8553170	4	1215,75,141,270,	0,1403,1869,3214,
#Deleted in new
chr3	129555213	129557223	chr3:129555213-129557223	1	-	129555504	129557136	789624	3	330,75,141,	0,1403,1869,
#Partially deleted in new
chr3	129555217	129565991	chr3:129555217-129565991	0	-	129558521	129565991	789624	13	1211,75,141,148,171,105,35,64,104,157,147,199,105,	0,1399,1865,3210,4395,5112,5471,6428,6582,7569,7876,10122,10669,
#Deleted in new
chr3	129556616	129561056	chr3:129556616-129561056	0	-	129556616	129561056	789624	7	75,141,148,164,105,35,23,	0,466,1811,3003,3713,4072,4417,
#Deleted in new
chr3	129558535	129560942	chr3:129558535-129560942	0	-	129558535	129558535	8553170	4	40,164,105,254,	0,1084,1794,2153,
#Deleted in new
chr3	129559164	129560414	chr3:129559164-129560414	0	-	129559164	129559164	8553170	2	619,85,	0,1165,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	129562472	129563213	chr3:129562472-129563213	0	-	129562472	129562472	8553170	2	471,120,	0,621,
#Partially deleted in new
chr3	129563093	129566166	chr3:129563093-129566166	0	-	129563093	129563093	8553170	3	147,199,280,	0,2246,2793,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	129569188	129571204	chr3:129569188-129571204	0	-	129569188	129569188	8553170	3	769,150,165,	0,1597,1851,
#Deleted in new
chr3	129570683	129571723	chr3:129570683-129571723	0	-	129570683	129570683	8553170	4	252,264,91,47,	0,356,825,993,
#Deleted in new
chr3	129570871	129571858	chr3:129570871-129571858	0	-	129570871	129570871	8553170	4	64,264,91,182,	0,168,637,805,
#Partially deleted in new
chr3	129571539	129572982	chr3:129571539-129572982	0	-	129571539	129571539	8553170	3	60,168,374,	0,137,1069,
#Deleted in new
chr3	129574335	129578548	chr3:129574335-129578548	0	-	129574335	129574335	8553170	4	155,94,90,220,	0,1133,1430,3993,
#Partially deleted in new
chr3	129583630	129586685	chr3:129583630-129586685	0	-	129584224	129586685	789624	5	39,109,130,101,98,	0,494,2321,2541,2957,
#Partially deleted in new
chr3	129585951	129589527	chr3:129585951-129589527	0	-	129585951	129589527	789624	4	97,101,132,177,	0,220,636,3399,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	129591348	129591635	chr3:129591348-129591635	3	+	129591348	129591348	8553170	1	287,	0,
#Partially deleted in new
chr3	129632018	129632492	chr3:129632018-129632492	7	-	129632018	129632018	16724991	1	474,	0,
#Partially deleted in new
chr3	129647791	129880466	chr3:129647791-129880466	3	-	129651480	129828378	789624	6	4004,136,935,706,53,158,	0,7176,22538,180011,184982,232517,
#Partially deleted in new
chr3	129647791	129688732	chr3:129647791-129688732	1	-	129651480	129670868	789624	4	4004,136,935,556,	0,7176,22538,40385,
#Partially deleted in new
chr3	129647793	129893576	chr3:129647793-129893576	1	-	129651480	129828036	789624	6	4002,136,935,275,53,83,	0,7174,22536,180009,184980,245700,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	129647826	129893606	chr3:129647826-129893606	1	-	129651480	129828036	8553170	11	3969,136,935,275,53,163,156,73,254,123,113,	0,7141,22503,179976,184947,191071,209423,213113,232482,241155,245667,
#Partially deleted in new
chr3	129654966	129656726	chr3:129654966-129656726	0	-	129654966	129655018	789624	2	137,71,	0,1689,
#Partially deleted in new
chr3	129671248	129893551	chr3:129671248-129893551	0	-	129671248	129828036	789624	4	16,275,53,58,	0,156554,161525,222245,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	129818931	129819033	chr3:129818931-129819033	3	+	129818931	129818931	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	129819776	129819876	chr3:129819776-129819876	3	+	129819776	129819776	8553170	1	100,	0,
#Partially deleted in new
chr3	129827755	129893532	chr3:129827755-129893532	0	-	129827755	129827755	8553170	4	322,53,251,39,	0,5018,52553,65738,
#Partially deleted in new
chr3	129828018	129867100	chr3:129828018-129867100	0	-	129828018	129828036	8553170	3	59,53,91,	0,4755,38991,
#Partially deleted in new
chr3	129828450	129893575	chr3:129828450-129893575	0	-	129828450	129828450	8553170	5	58,53,89,251,82,	0,4323,38559,51858,65043,
#Partially deleted in new
chr3	129832757	129893551	chr3:129832757-129893551	0	-	129832757	129832757	8553170	4	69,89,251,58,	0,34252,47551,60736,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	129847047	129847957	chr3:129847047-129847957	3	-	129847047	129847047	8553170	1	910,	0,
#Partially deleted in new
chr3	129848345	129893576	chr3:129848345-129893576	0	-	129848345	129848345	8553170	4	67,156,251,83,	0,8904,31963,45148,
#Partially deleted in new
chr3	129857247	129893321	chr3:129857247-129893321	0	-	129857247	129857247	8553170	3	158,251,140,	0,23061,35934,
#Partially deleted in new
chr3	129857359	129892745	chr3:129857359-129892745	0	-	129857359	129857359	8553170	4	46,73,251,173,	0,3580,22949,35213,
#Partially deleted in new
chr3	129880308	129893419	chr3:129880308-129893419	0	-	129880308	129880308	8553170	2	251,238,	0,12873,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	129893810	129908911	chr3:129893810-129908911	1	+	129893810	129893810	789624	3	117,154,3285,	0,7896,11816,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	129893870	129902205	chr3:129893870-129902205	0	+	129893870	129893870	8553170	2	57,499,	0,7836,
#Partially deleted in new
chr3	129974304	129977938	chr3:129974304-129977938	3	+	129975816	129977216	789624	3	519,219,1240,	0,1504,2394,
#Partially deleted in new
chr3	129974687	129977935	chr3:129974687-129977935	1	+	129975816	129977216	789624	3	136,207,1237,	0,1121,2011,
#Deleted in new
chr3	129998530	129998936	chr3:129998530-129998936	7	+	129998530	129998530	16724991	1	406,	0,
#Deleted in new
chr3	130002788	130003007	chr3:130002788-130003007	7	-	130002788	130002788	16724991	1	219,	0,
#Deleted in new
chr3	130013181	130013541	chr3:130013181-130013541	7	-	130013181	130013181	16724991	1	360,	0,
#Deleted in new
chr3	130021552	130022520	chr3:130021552-130022520	7	-	130021552	130021552	16724991	1	968,	0,
#Deleted in new
chr3	130034552	130035539	chr3:130034552-130035539	7	-	130034552	130034552	16724991	1	987,	0,
#Partially deleted in new
chr3	130048142	130055920	chr3:130048142-130055920	7	-	130048142	130048142	16724991	3	50,81,197,	0,2774,7581,
#Partially deleted in new
chr3	130081830	130098390	chr3:130081830-130098390	3	+	130082016	130098255	789624	8	206,111,122,60,111,115,76,168,	0,9430,10270,11270,12572,14218,15344,16392,
#Partially deleted in new
chr3	130081960	130098390	chr3:130081960-130098390	0	+	130081960	130081960	8553170	8	76,133,122,60,65,115,76,168,	0,9278,10140,11140,12442,14088,15214,16262,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	130089432	130094304	chr3:130089432-130094304	3	-	130089432	130089432	8553170	4	46,419,91,157,	0,1269,2344,4715,
#Partially deleted in new
chr3	130093905	130113227	chr3:130093905-130113227	0	+	130093905	130093905	8553170	3	59,65,449,	0,497,18873,
#Partially deleted in new
chr3	130099091	130103822	chr3:130099091-130103822	5	-	130099091	130099091	16724991	3	267,172,82,	0,3672,4649,
#Partially deleted in new
chr3	130099257	130111472	chr3:130099257-130111472	7	-	130099257	130099257	16724991	8	101,150,266,102,102,81,61,96,	0,3506,4483,4908,6272,7951,9915,12119,
#Partially deleted in new
chr3	130102763	130111433	chr3:130102763-130111433	4	-	130102763	130102763	16724991	4	150,132,102,155,	0,1402,2766,8515,
#Deleted in new
chr3	130102763	130104114	chr3:130102763-130104114	4	-	130102763	130102763	16724991	3	172,266,26,	0,977,1325,
#Partially deleted in new
chr3	130102763	130111432	chr3:130102763-130111432	4	-	130102763	130102763	16724991	3	150,132,154,	0,1402,8515,
#Partially deleted in new
chr3	130112549	130119430	chr3:130112549-130119430	0	+	130112549	130112549	8553170	2	195,374,	0,6507,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	130112549	130119174	chr3:130112549-130119174	1	+	130112549	130112549	8553170	3	195,256,118,	0,4287,6507,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	130112651	130120579	chr3:130112651-130120579	3	+	130112651	130112651	8553170	3	93,256,1259,	0,4185,6669,
#Partially deleted in new
chr3	130167789	130168030	chr3:130167789-130168030	7	-	130167789	130167789	16724991	1	241,	0,
#Deleted in new
chr3	130199707	130199918	chr3:130199707-130199918	7	+	130199707	130199707	16724991	1	211,	0,
#Partially deleted in new
chr3	130212822	130273327	chr3:130212822-130273327	7	+	130212822	130212822	16724991	25	72,27,42,54,63,66,54,36,63,63,63,63,51,36,63,63,36,37,12,492,91,685,97,230,194,	0,1393,2849,5446,8554,8966,15193,15364,18623,20623,21764,22337,24696,31468,31608,32950,34214,35563,37894,37995,48090,50977,53447,54191,60311,
#Partially deleted in new
chr3	130214229	130245843	chr3:130214229-130245843	4	+	130214229	130214229	16724991	14	13,42,54,63,66,54,36,63,63,63,51,36,63,71,	0,1442,4039,7147,7559,13786,13957,19216,20357,20930,23289,30061,30201,31543,
#Partially deleted in new
chr3	130244460	130251038	chr3:130244460-130251038	4	+	130244460	130244460	16724991	6	33,63,37,135,12,221,	0,1312,3925,4156,6256,6357,
#Partially deleted in new
chr3	130245447	130248452	chr3:130245447-130248452	4	+	130245447	130245447	16724991	2	388,67,	0,2938,
#Partially deleted in new
chr3	130264441	130267441	chr3:130264441-130267441	4	+	130264441	130264441	16724991	3	43,97,428,	0,1828,2572,
#Deleted in new
chr3	130273300	130273806	chr3:130273300-130273806	5	+	130273300	130273300	16724991	1	506,	0,
#Deleted in new
chr3	130293336	130293760	chr3:130293336-130293760	7	+	130293336	130293336	16724991	1	424,	0,
#Partially deleted in new
chr3	130345515	130484844	chr3:130345515-130484844	3	+	130373638	130477065	789624	43	466,95,600,633,561,555,576,576,341,82,143,93,54,72,27,45,54,63,66,54,36,63,63,63,63,51,36,63,63,36,37,5,6,474,94,660,91,212,687,97,245,103,810,	0,28095,30721,33902,39288,43064,45663,49374,52067,52514,55515,56246,58093,60072,60477,60615,60752,63810,64493,64955,68029,68553,70129,71241,73353,75637,75809,77204,78322,80698,80851,85941,85949,85960,94006,94650,97960,109939,123279,125355,126166,131521,138519,
#Partially deleted in new
chr3	130345515	130484844	chr3:130345515-130484844	0	+	130373638	130477065	789624	42	466,95,600,633,561,555,576,576,341,82,143,93,54,72,27,45,54,63,66,54,36,63,63,63,63,51,36,63,63,36,37,12,485,94,660,91,212,687,97,245,103,810,	0,28095,30721,33902,39288,43064,45663,49374,52067,52514,55515,56246,58093,60072,60477,60615,60752,63810,64493,64955,68029,68553,70129,71241,73353,75637,75809,77204,78322,80698,80851,84057,85949,94006,94650,97960,109939,123279,125355,126166,131521,138519,
#Partially deleted in new
chr3	130431462	130484844	chr3:130431462-130484844	0	+	130431462	130484041	789624	8	487,94,660,91,212,687,97,810,	0,8059,8703,12013,23992,37332,39408,52572,
#Partially deleted in new
chr3	130440509	130484156	chr3:130440509-130484156	0	+	130440509	130484060	789624	7	316,91,212,687,97,245,122,	0,2966,14945,28285,30361,31172,43525,
#Partially deleted in new
chr3	130443483	130477338	chr3:130443483-130477338	0	+	130443483	130476890	789624	6	83,212,687,97,245,456,	0,11971,25311,27387,28198,33399,
#Boundary problem: need 36, got 0, diff 36, mapped 0.0
chr3	130560333	130678155	chr3:130560333-130678155	3	+	130560364	130675397	789624	36	95,597,621,561,558,576,570,344,79,155,93,54,72,27,45,54,63,66,54,36,63,63,63,63,51,36,63,63,36,37,12,494,97,672,94,2954,	0,2734,4660,6368,7713,10484,13622,21227,21656,26172,28756,30707,32207,32362,32727,32865,33947,38031,39423,46597,48568,50315,61487,66151,66985,74256,75365,81318,82498,82653,84657,88735,98342,101303,104669,114868,
#Partially deleted in new
chr3	130581681	130677044	chr3:130581681-130677044	0	+	130581681	130594373	789624	28	223,79,155,93,54,72,27,45,54,139,66,54,36,63,63,63,63,51,36,63,63,36,37,12,97,672,94,1843,	0,308,4824,7408,9359,10859,11014,11379,11517,12599,16683,18075,25249,27220,28967,40139,44803,45637,52908,54017,59970,61150,61305,63309,76994,79955,83321,93520,
#Partially deleted in new
chr3	130581740	130593224	chr3:130581740-130593224	0	+	130581740	130593224	789624	10	164,79,155,93,63,54,72,27,45,26,	0,249,4765,7349,8233,9300,10800,10955,11320,11458,
#Partially deleted in new
chr3	130678934	130746829	chr3:130678934-130746829	3	-	130679314	130745218	789624	20	551,109,89,101,132,212,165,166,211,188,202,204,146,174,222,135,583,134,779,512,	0,1678,2042,2556,5315,7276,11555,24788,26626,28013,29356,37461,39454,44479,49528,51373,54613,56934,65551,67383,
#Partially deleted in new
chr3	130679009	130681071	chr3:130679009-130681071	0	-	130679009	130679009	8553170	3	476,109,95,	0,1603,1967,
#Partially deleted in new
chr3	130680520	130686415	chr3:130680520-130686415	0	-	130680520	130680520	8553170	5	201,89,101,132,205,	0,456,970,3729,5690,
#Partially deleted in new
chr3	130680603	130690657	chr3:130680603-130690657	0	-	130680603	130680603	8553170	6	118,89,101,56,212,168,	0,373,887,3646,5607,9886,
#Partially deleted in new
chr3	130708321	130723815	chr3:130708321-130723815	0	-	130708321	130723471	789624	5	171,204,146,174,122,	0,8074,10067,15092,15372,
#Partially deleted in new
chr3	130716416	130725958	chr3:130716416-130725958	0	-	130716416	130723471	789624	4	183,146,174,60,	0,1972,6997,9482,
#Partially deleted in new
chr3	130716423	130723893	chr3:130716423-130723893	0	-	130716423	130723471	789624	4	176,146,174,83,	0,1965,6990,7387,
#Partially deleted in new
chr3	130718530	130733938	chr3:130718530-130733938	0	-	130718530	130718530	8553170	3	4,174,391,	0,4883,15017,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	130811767	130812095	chr3:130811767-130812095	3	-	130811767	130811767	8553170	1	328,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	130821183	130823914	chr3:130821183-130823914	3	+	130821183	130821183	8553170	2	401,1215,	0,1516,
#Deleted in new
chr3	130827658	130828376	chr3:130827658-130828376	7	+	130827658	130827658	16724991	1	718,	0,
#Partially deleted in new
chr3	130850594	131016684	chr3:130850594-131016684	1	+	130850820	131016247	789624	27	334,111,90,36,62,109,156,69,76,67,125,98,96,90,105,157,171,98,51,167,69,117,148,96,142,125,533,	0,79821,84027,86833,90035,90996,103226,104417,105509,108680,113376,114353,116550,116735,118697,124737,128654,129987,142356,143337,145448,146085,147011,147699,148923,150625,165557,
#Partially deleted in new
chr3	130850594	131003150	chr3:130850594-131003150	1	+	130850820	131001350	789624	27	334,111,117,90,36,62,109,156,69,76,67,125,98,96,90,105,157,171,98,51,167,69,117,148,96,142,1931,	0,79821,81427,84027,86833,90035,90996,103226,104417,105509,108680,113376,114353,116550,116735,118697,124737,128654,129987,142356,143337,145448,146085,147011,147699,148923,150625,
#Partially deleted in new
chr3	130850600	131016684	chr3:130850600-131016684	1	+	130850820	131016247	789624	28	328,111,117,90,36,62,109,156,69,76,67,125,98,96,90,105,157,171,98,51,167,69,117,148,96,142,95,533,	0,79815,81421,84021,86827,90029,90990,103220,104411,105503,108674,113370,114347,116544,116729,118691,124731,128648,129981,142350,143331,145442,146079,147005,147693,148917,150619,165551,
#Partially deleted in new
chr3	130850782	130856223	chr3:130850782-130856223	0	+	130850782	130850782	8553170	3	146,84,343,	0,3403,5098,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	130868003	130869357	chr3:130868003-130869357	3	-	130868003	130868003	8553170	1	1354,	0,
#Partially deleted in new
chr3	130893967	131003107	chr3:130893967-131003107	1	+	130894769	131001350	789624	28	370,186,111,117,90,36,62,109,156,69,76,67,125,98,96,90,105,157,171,98,51,167,69,117,148,96,142,1888,	0,622,36448,38054,40654,43460,46662,47623,59853,61044,62136,65307,70003,70980,73177,73362,75324,81364,85281,86614,98983,99964,102075,102712,103638,104326,105550,107252,
#Partially deleted in new
chr3	130893990	131003150	chr3:130893990-131003150	1	+	130894769	131001350	789624	28	347,68,111,117,90,36,62,109,156,69,76,67,125,98,96,90,105,157,171,98,51,167,69,117,148,96,142,1931,	0,717,36425,38031,40631,43437,46639,47600,59830,61021,62113,65284,69980,70957,73154,73339,75301,81341,85258,86591,98960,99941,102052,102689,103615,104303,105527,107229,
#Partially deleted in new
chr3	130894014	131016709	chr3:130894014-131016709	1	+	130894769	131016189	789624	28	323,186,111,117,90,36,62,109,156,69,76,67,125,98,96,90,105,157,171,98,51,167,69,117,148,96,142,558,	0,575,36401,38007,40607,43413,46615,47576,59806,60997,62089,65260,69956,70933,73130,73315,75277,81317,85234,86567,98936,99917,102028,102665,103591,104279,105503,122137,
#Partially deleted in new
chr3	130894177	131003150	chr3:130894177-131003150	1	+	130930457	131001350	789624	27	160,111,117,90,36,62,109,156,69,76,67,125,98,96,90,105,157,171,98,51,167,69,117,148,96,142,1931,	0,36238,37844,40444,43250,46452,47413,59643,60834,61926,65097,69793,70770,72967,73152,75114,81154,85071,86404,98773,99754,101865,102502,103428,104116,105340,107042,
#Partially deleted in new
chr3	130894177	131016712	chr3:130894177-131016712	1	+	130930457	131016247	789624	28	160,111,117,90,36,62,109,156,69,76,67,125,98,96,90,105,157,171,98,51,167,69,117,148,96,142,95,561,	0,36238,37844,40444,43250,46452,47413,59643,60834,61926,65097,69793,70770,72967,73152,75114,81154,85071,86404,98773,99754,101865,102502,103428,104116,105340,107042,121974,
#Partially deleted in new
chr3	130894181	130937464	chr3:130894181-130937464	0	+	130894769	130937464	789624	6	156,45,111,117,90,37,	0,549,36234,37840,40440,43246,
#Partially deleted in new
chr3	130894381	130934694	chr3:130894381-130934694	0	+	130894769	130934694	789624	5	72,186,111,117,73,	0,208,36034,37640,40240,
#Partially deleted in new
chr3	130894447	131016684	chr3:130894447-131016684	1	+	130894769	131016189	789624	27	328,111,117,90,36,62,109,156,69,76,67,125,98,96,90,105,157,171,98,51,167,69,117,148,96,142,533,	0,35968,37574,40174,42980,46182,47143,59373,60564,61656,64827,69523,70500,72697,72882,74844,80884,84801,86134,98503,99484,101595,102232,103158,103846,105070,121704,
#Partially deleted in new
chr3	130894534	131003150	chr3:130894534-131003150	1	+	130894769	131001350	789624	27	241,111,117,90,36,62,109,156,69,76,67,125,98,96,90,105,157,171,98,51,167,69,117,148,96,142,1931,	0,35881,37487,40087,42893,46095,47056,59286,60477,61569,64740,69436,70413,72610,72795,74757,80797,84714,86047,98416,99397,101508,102145,103071,103759,104983,106685,
#Partially deleted in new
chr3	130894640	131016669	chr3:130894640-131016669	3	+	130894769	131016247	789624	28	135,111,117,90,36,62,109,156,69,76,67,125,98,96,90,105,157,171,98,51,167,69,117,148,96,142,125,518,	0,35775,37381,39981,42787,45989,46950,59180,60371,61463,64634,69330,70307,72504,72689,74651,80691,84608,85941,98310,99291,101402,102039,102965,103653,104877,106579,121511,
#Partially deleted in new
chr3	130894640	131016684	chr3:130894640-131016684	1	+	130894769	131016247	789624	28	135,111,117,90,36,62,109,156,69,76,67,125,98,96,90,105,157,171,98,51,167,69,117,148,96,142,95,533,	0,35775,37381,39981,42787,45989,46950,59180,60371,61463,64634,69330,70307,72504,72689,74651,80691,84608,85941,98310,99291,101402,102039,102965,103653,104877,106579,121511,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	130899413	130929976	chr3:130899413-130929976	3	-	130899413	130899413	8553170	2	221,119,	0,30444,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	130914339	130914452	chr3:130914339-130914452	3	-	130914339	130914339	8553170	1	113,	0,
#Partially deleted in new
chr3	130918225	130919120	chr3:130918225-130919120	7	-	130918225	130918225	16724991	2	478,94,	0,801,
#Deleted in new
chr3	130927753	130928276	chr3:130927753-130928276	7	-	130927753	130927753	16724991	1	523,	0,
#Partially deleted in new
chr3	130929997	130934681	chr3:130929997-130934681	0	+	130930457	130934681	789624	4	252,111,117,60,	0,418,2024,4624,
#Partially deleted in new
chr3	130932043	131016684	chr3:130932043-131016684	0	+	130932043	131016247	789624	26	95,90,36,62,109,156,69,76,67,125,98,96,90,105,157,171,98,51,167,69,117,148,96,142,125,533,	0,2578,5384,8586,9547,21777,22968,24060,27231,31927,32904,35101,35286,37248,43288,47205,48538,60907,61888,63999,64636,65562,66250,67474,69176,84108,
#Partially deleted in new
chr3	130953838	130959581	chr3:130953838-130959581	0	+	130953838	130953838	8553170	4	138,69,76,307,	0,1173,2265,5436,
#Partially deleted in new
chr3	130955742	130967198	chr3:130955742-130967198	0	+	130956130	130967198	789624	6	141,76,67,125,98,54,	0,361,3532,8228,9205,11402,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	130962901	131003150	chr3:130962901-131003150	0	+	130962901	130962901	8553170	16	1194,98,96,90,105,157,171,98,51,167,69,117,148,96,142,1931,	0,2046,4243,4428,6390,12430,16347,17680,30049,31030,33141,33778,34704,35392,36616,38318,
#Partially deleted in new
chr3	130964010	130994015	chr3:130964010-130994015	0	+	130964010	130992947	789624	8	85,98,96,90,105,157,71,84,	0,937,3134,3319,5281,11321,28920,29921,
#Partially deleted in new
chr3	130967387	130997752	chr3:130967387-130997752	0	+	130967387	130997752	789624	9	32,105,157,98,51,167,69,117,147,	0,1904,7944,13194,25563,26544,28655,29292,30218,
#Partially deleted in new
chr3	130980569	130996269	chr3:130980569-130996269	0	+	130980569	130980569	8553170	4	110,51,167,227,	0,12381,13362,15473,
#Partially deleted in new
chr3	130994069	131001342	chr3:130994069-131001342	0	+	130994069	130997616	789624	7	29,69,44,148,96,142,123,	0,1973,2683,3536,4224,5448,7150,
#Partially deleted in new
chr3	131013874	131026802	chr3:131013874-131026802	3	-	131014056	131025306	789624	6	513,196,211,1327,121,296,	0,2269,4631,10130,11599,12632,
#Partially deleted in new
chr3	131013874	131026792	chr3:131013874-131026792	1	-	131014056	131025306	789624	7	513,75,196,211,1327,121,61,	0,1307,2269,4631,10130,11599,12857,
#Partially deleted in new
chr3	131013981	131026854	chr3:131013981-131026854	0	-	131016999	131025306	789624	7	406,196,60,211,1327,121,348,	0,2162,3008,4524,10023,11492,12525,
#Partially deleted in new
chr3	131016290	131024450	chr3:131016290-131024450	0	-	131016290	131024450	789624	3	49,190,53,	0,2215,8107,
#Partially deleted in new
chr3	131018504	131025539	chr3:131018504-131025539	0	-	131024162	131025306	789624	4	212,234,168,66,	0,5500,6659,6969,
#Partially deleted in new
chr3	131025157	131027649	chr3:131025157-131027649	0	-	131025157	131025306	789624	4	174,121,77,179,	0,316,2090,2313,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	131025161	131026586	chr3:131025161-131026586	0	-	131025161	131025306	789624	2	170,399,	0,1026,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	131025285	131026609	chr3:131025285-131026609	0	-	131025285	131025306	789624	3	46,121,422,	0,188,902,
#Partially deleted in new
chr3	131026849	131350049	chr3:131026849-131350049	1	+	131029708	131349776	789624	14	157,266,166,119,65,127,120,94,108,115,161,61,97,493,	0,2763,53573,82953,105895,106980,135558,138576,141980,143923,201678,216586,246628,322707,
#Partially deleted in new
chr3	131026878	131134278	chr3:131026878-131134278	0	+	131026878	131026878	8553170	6	1124,266,166,119,65,449,	0,2734,53544,82924,105866,106951,
#Partially deleted in new
chr3	131026878	131350465	chr3:131026878-131350465	1	+	131029708	131349735	789624	16	128,266,166,119,65,127,150,79,86,120,94,108,115,161,61,909,	0,2734,53544,82924,105866,106951,125509,125752,128157,135529,138547,141951,143894,201649,216557,322678,
#Partially deleted in new
chr3	131026882	131350459	chr3:131026882-131350459	3	+	131029708	131349776	789624	18	124,73,266,166,119,65,127,150,79,86,120,94,108,115,161,61,97,903,	0,1047,2730,53540,82920,105862,106947,125505,125748,128153,135525,138543,141947,143890,201645,216553,246595,322674,
#Partially deleted in new
chr3	131026882	131175130	chr3:131026882-131175130	1	+	131029708	131174780	789624	15	124,73,266,166,119,65,127,150,79,86,120,94,108,115,364,	0,1047,2730,53540,82920,105862,106947,125505,125748,128153,135525,138543,141947,143890,147884,
#Partially deleted in new
chr3	131026911	131029813	chr3:131026911-131029813	0	+	131026911	131026911	8553170	2	307,201,	0,2701,
#Partially deleted in new
chr3	131026922	131350442	chr3:131026922-131350442	0	+	131029708	131133869	789624	18	84,266,166,119,65,79,127,150,79,86,120,94,108,115,161,61,97,886,	0,2690,53500,82880,105822,106354,106907,125465,125708,128113,135485,138503,141907,143850,201605,216513,246555,322634,
#Partially deleted in new
chr3	131026934	131350281	chr3:131026934-131350281	0	+	131029708	131109872	789624	15	72,266,119,65,127,150,79,86,120,94,115,161,61,97,725,	0,2678,82868,105810,106895,125453,125696,128101,135473,138491,143838,201593,216501,246543,322622,
#Partially deleted in new
chr3	131026950	131029878	chr3:131026950-131029878	0	+	131026950	131026950	8553170	3	252,73,266,	0,979,2662,
#Partially deleted in new
chr3	131027728	131184773	chr3:131027728-131184773	1	+	131029708	131184751	789624	14	274,266,166,119,65,127,150,79,86,120,94,108,115,72,	0,1884,52694,82074,105016,106101,124659,124902,127307,134679,137697,141101,143044,156973,
#Partially deleted in new
chr3	131029597	131175130	chr3:131029597-131175130	1	+	131029708	131174780	789624	13	281,166,119,65,127,150,79,86,120,94,108,115,364,	0,50825,80205,103147,104232,122790,123033,125438,132810,135828,139232,141175,145169,
#Partially deleted in new
chr3	131029708	131349776	chr3:131029708-131349776	1	+	131029708	131349776	789624	16	170,166,119,65,127,150,79,86,120,94,108,115,161,61,97,220,	0,50714,80094,103036,104121,122679,122922,125327,132699,135717,139121,141064,198819,213727,243769,319848,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	131053316	131072339	chr3:131053316-131072339	0	-	131053316	131053316	8553170	3	363,118,110,	0,1151,18913,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	131053359	131072335	chr3:131053359-131072335	0	-	131053359	131053359	8553170	3	447,114,106,	0,1108,18870,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	131053359	131072335	chr3:131053359-131072335	3	-	131053359	131053359	8553170	3	447,118,106,	0,1108,18870,
#Partially deleted in new
chr3	131080422	131152569	chr3:131080422-131152569	0	+	131080422	131152569	789624	5	166,119,65,127,182,	0,29380,52322,53407,71965,
#Partially deleted in new
chr3	131088006	131152703	chr3:131088006-131152703	0	+	131088006	131088006	8553170	7	141,119,65,110,127,150,73,	0,21796,44738,45239,45823,64381,64624,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	131092820	131092927	chr3:131092820-131092927	3	-	131092820	131092820	8553170	1	107,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	131109399	131155067	chr3:131109399-131155067	0	+	131109399	131109399	8553170	7	104,119,65,127,150,79,32,	0,403,23345,24430,42988,43231,45636,
#Partially deleted in new
chr3	131154869	131165523	chr3:131154869-131165523	0	+	131154869	131154869	8553170	3	252,120,98,	0,7538,10556,
#Partially deleted in new
chr3	131165276	131228595	chr3:131165276-131228595	0	+	131165276	131165276	8553170	4	243,108,115,68,	0,3553,5496,63251,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	131325091	131381475	chr3:131325091-131381475	3	-	131325091	131325091	789624	4	1185,554,96,143,	0,2085,51520,56241,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	131327562	131330868	chr3:131327562-131330868	0	-	131327562	131327562	8553170	2	168,2021,	0,1285,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	131330087	131361597	chr3:131330087-131361597	0	-	131330087	131330087	8553170	2	780,32,	0,31478,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	131361897	131365122	chr3:131361897-131365122	7	+	131361897	131361897	16724991	3	171,270,1767,	0,274,1458,
#Partially deleted in new
chr3	131361911	131364531	chr3:131361911-131364531	4	+	131361911	131361911	16724991	2	530,1176,	0,1444,
#Partially deleted in new
chr3	131361929	131363564	chr3:131361929-131363564	5	+	131361929	131361929	16724991	3	142,271,207,	0,242,1428,
#Deleted in new
chr3	131381670	131388830	chr3:131381670-131388830	1	+	131382045	131383442	0	4	75,270,111,5487,	0,375,1491,1673,
#Deleted in new
chr3	131381773	131388830	chr3:131381773-131388830	3	+	131381804	131383341	0	3	169,270,5669,	0,272,1388,
#Deleted in new
chr3	131381784	131383439	chr3:131381784-131383439	1	+	131381804	131382591	0	2	158,1394,	0,261,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	131455125	131458598	chr3:131455125-131458598	3	-	131455125	131455125	8553170	1	3473,	0,
#Partially deleted in new
chr3	131462211	131502969	chr3:131462211-131502969	3	-	131462722	131502821	0	10	664,78,78,109,61,100,99,92,185,240,	0,5879,7484,8959,25468,27769,35967,38218,39319,40518,
#Partially deleted in new
chr3	131462435	131502983	chr3:131462435-131502983	0	-	131462722	131502983	789624	10	440,78,78,109,61,100,99,92,185,135,	0,5655,7260,8735,25244,27545,35743,37994,39095,40413,
#Partially deleted in new
chr3	131462553	131471334	chr3:131462553-131471334	0	-	131462553	131462553	8553170	4	322,78,78,162,	0,5537,7142,8619,
#Partially deleted in new
chr3	131462555	131502983	chr3:131462555-131502983	1	-	131462722	131502821	789624	11	320,78,78,109,61,100,99,92,185,81,254,	0,5535,7140,8615,25124,27425,35623,37874,38975,39288,40174,
#Partially deleted in new
chr3	131469731	131502942	chr3:131469731-131502942	0	-	131469731	131500483	789624	8	42,109,61,100,99,92,185,160,	0,1439,17948,20249,28447,30698,31799,33051,
#Deleted in new
chr3	131479096	131479233	chr3:131479096-131479233	3	-	131479096	131479096	789624	1	137,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	131487149	131490023	chr3:131487149-131490023	0	-	131487149	131487149	8553170	2	591,43,	0,2831,
#Partially deleted in new
chr3	131487680	131502951	chr3:131487680-131502951	0	-	131487680	131502821	789624	5	60,100,92,185,222,	0,2300,12749,13850,15049,
#Partially deleted in new
chr3	131488670	131500484	chr3:131488670-131500484	0	-	131488670	131488670	8553170	4	130,100,99,55,	0,1310,9508,11759,
#Partially deleted in new
chr3	131497979	131502967	chr3:131497979-131502967	0	-	131497979	131497979	8553170	4	298,92,185,238,	0,2450,3551,4750,
#Partially deleted in new
chr3	131498246	131502937	chr3:131498246-131502937	0	-	131498246	131500483	789624	5	31,92,185,81,143,	0,2183,3284,3597,4548,
#Partially deleted in new
chr3	131517830	131520880	chr3:131517830-131520880	3	+	131517830	131517830	8553170	2	79,496,	0,2554,
#Deleted in new
chr3	131526446	131527179	chr3:131526446-131527179	7	+	131526446	131526446	16724991	1	733,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	131533554	131543093	chr3:131533554-131543093	0	-	131533554	131533554	8553170	2	1775,537,	0,9002,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	131533561	132035442	chr3:131533561-132035442	1	-	131535194	131905443	789624	16	1768,237,134,52,55,134,60,87,99,90,84,75,72,180,181,876,	0,8995,16385,18878,21935,30654,41509,48017,53922,136113,152313,162980,166347,189884,371702,501005,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	131533561	132037804	chr3:131533561-132037804	1	-	131535194	132037609	789624	16	1768,237,134,52,55,134,60,87,99,90,84,75,72,180,181,248,	0,8995,16385,18878,21935,30654,41509,48017,53922,136113,152313,162980,166347,189884,371702,503995,
#Partially deleted in new
chr3	131534736	131723631	chr3:131534736-131723631	0	-	131534736	131534736	8553170	14	593,237,134,52,55,134,60,87,99,90,84,75,72,186,	0,7820,15210,17703,20760,29479,40334,46842,52747,134938,151138,161805,165172,188709,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	131534742	131538940	chr3:131534742-131538940	0	-	131534742	131534742	8553170	2	587,113,	0,4085,
#Partially deleted in new
chr3	131534875	132039606	chr3:131534875-132039606	1	-	131535194	132037609	789624	17	454,237,134,52,55,134,60,87,99,90,84,75,72,180,181,154,82,	0,7681,15071,17564,20621,29340,40195,46703,52608,134799,150999,161666,165033,188570,370388,502681,504649,
#Partially deleted in new
chr3	131534942	132039606	chr3:131534942-132039606	1	-	131535194	131905443	789624	19	387,237,134,52,55,134,60,87,99,90,84,75,72,180,181,232,108,154,82,	0,7614,15004,17497,20554,29273,40128,46636,52541,134732,150932,161599,164966,188503,370321,499624,500392,502614,504582,
#Partially deleted in new
chr3	131535022	132037962	chr3:131535022-132037962	1	-	131535194	132037609	789624	17	307,237,134,52,55,134,60,87,99,90,84,75,72,180,181,154,119,	0,7534,14924,17417,20474,29193,40048,46556,52461,134652,150852,161519,164886,188423,370241,502534,502821,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	131537570	131537685	chr3:131537570-131537685	7	-	131537570	131537570	16724991	1	115,	0,
#Partially deleted in new
chr3	131696541	131925581	chr3:131696541-131925581	0	-	131696541	131905443	789624	5	75,72,180,181,53,	0,3367,26904,208722,228987,
#Partially deleted in new
chr3	131723557	132017755	chr3:131723557-132017755	0	-	131723557	131905443	789624	3	68,181,301,	0,181706,293897,
#Partially deleted in new
chr3	131723585	132037719	chr3:131723585-132037719	0	-	131723585	131905443	789624	4	40,181,193,163,	0,181678,310981,313971,
#Deleted in new
chr3	131985854	131985931	chr3:131985854-131985931	3	-	131985854	131985854	5263520	1	77,	0,
#Deleted in new
chr3	132034746	132040250	chr3:132034746-132040250	0	-	132034746	132034746	8553170	5	44,108,154,81,60,	0,588,2810,4778,5444,
#Deleted in new
chr3	132035311	132040223	chr3:132035311-132040223	0	-	132035311	132035311	8553170	3	131,154,33,	0,2245,4879,
#Partially deleted in new
chr3	132175401	132176711	chr3:132175401-132176711	7	+	132175401	132175401	16724991	1	1310,	0,
#Deleted in new
chr3	132243527	132244265	chr3:132243527-132244265	7	-	132243527	132243527	16724991	1	738,	0,
#Partially deleted in new
chr3	132317366	132358752	chr3:132317366-132358752	3	+	132317456	132356878	0	10	210,96,87,153,99,93,133,83,104,2067,	0,10900,14280,14825,20089,25185,27560,32553,35353,39319,
#Partially deleted in new
chr3	132317368	132342579	chr3:132317368-132342579	0	+	132317456	132342579	789624	5	208,96,153,99,28,	0,10898,14823,20087,25183,
#Partially deleted in new
chr3	132317405	132357007	chr3:132317405-132357007	1	+	132317456	132356878	0	9	171,96,87,153,93,133,83,104,322,	0,10861,14241,14786,25146,27521,32514,35314,39280,
#Partially deleted in new
chr3	132317406	132368298	chr3:132317406-132368298	1	+	132317456	132367822	0	11	170,96,87,153,99,93,133,83,104,170,595,	0,10860,14240,14785,20049,25145,27520,32513,35313,39279,50297,
#Partially deleted in new
chr3	132317425	132337543	chr3:132317425-132337543	0	+	132317425	132317425	8553170	5	151,96,87,153,68,	0,10841,14221,14766,20050,
#Partially deleted in new
chr3	132317436	132333492	chr3:132317436-132333492	0	+	132317436	132317436	8553170	5	140,96,87,153,87,	0,10830,14210,14755,15969,
#Partially deleted in new
chr3	132328323	132332626	chr3:132328323-132332626	0	+	132328323	132328323	8553170	3	39,87,435,	0,3323,3868,
#Partially deleted in new
chr3	132337351	132352788	chr3:132337351-132352788	0	+	132337351	132337351	8553170	5	203,93,133,83,69,	0,5200,7575,12568,15368,
#Partially deleted in new
chr3	132352801	132358720	chr3:132352801-132358720	0	+	132352801	132358523	789624	3	22,170,304,	0,3884,5615,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	132386521	132389074	chr3:132386521-132389074	7	+	132386521	132386521	16724991	2	2002,245,	0,2308,
#Partially deleted in new
chr3	132401252	132401796	chr3:132401252-132401796	7	+	132401252	132401252	16724991	1	544,	0,
#Partially deleted in new
chr3	132417525	132539032	chr3:132417525-132539032	3	+	132434550	132538282	789624	56	235,81,76,150,42,201,207,96,92,167,80,170,100,108,156,57,122,76,96,144,83,154,104,160,63,102,105,203,85,155,46,155,202,116,79,136,185,75,120,180,168,114,117,178,92,100,75,113,170,43,174,180,141,144,100,857,	0,17012,28949,29795,30372,33121,35772,36073,36540,38709,38975,39137,39743,42724,43524,44941,46170,48469,48773,49644,55619,57406,60263,60455,61701,62843,64700,65849,67062,70772,71450,73371,74888,76618,77562,79002,81600,82208,83268,84763,85688,87776,89711,93541,95482,97045,98896,99178,105302,105631,106014,108084,108615,110663,113472,120650,
#Partially deleted in new
chr3	132417707	132539021	chr3:132417707-132539021	0	+	132434550	132465954	8553170	57	53,81,76,150,42,201,207,96,92,167,80,170,100,108,156,57,122,120,96,144,83,154,104,160,63,102,105,203,126,85,155,46,155,202,116,79,136,185,75,120,180,168,114,117,178,92,100,75,113,170,43,174,180,141,144,100,846,	0,16830,28767,29613,30190,32939,35590,35891,36358,38527,38793,38955,39561,42542,43342,44759,45988,48243,48591,49462,55437,57224,60081,60273,61519,62661,64518,65667,66655,66880,70590,71268,73189,74706,76436,77380,78820,81418,82026,83086,84581,85506,87594,89529,93359,95300,96863,98714,98996,105120,105449,105832,107902,108433,110481,113290,120468,
#Partially deleted in new
chr3	132417708	132467346	chr3:132417708-132467346	0	+	132417708	132417708	8553170	20	52,81,76,150,42,201,207,96,92,167,80,170,100,108,156,57,122,76,96,177,	0,16829,28766,29612,30189,32938,35589,35890,36357,38526,38792,38954,39560,42541,43341,44758,45987,48286,48590,49461,
#Partially deleted in new
chr3	132456293	132458349	chr3:132456293-132458349	0	+	132456293	132456293	8553170	4	108,80,170,1081,	0,207,369,975,
#Partially deleted in new
chr3	132479226	132488409	chr3:132479226-132488409	0	+	132479226	132484411	789624	7	63,102,105,203,131,85,112,	0,1142,2999,4148,5136,5361,9071,
#Partially deleted in new
chr3	132513007	132514816	chr3:132513007-132514816	0	+	132513007	132513007	8553170	2	92,246,	0,1563,
#Partially deleted in new
chr3	132522972	132524017	chr3:132522972-132524017	0	+	132522972	132522972	8553170	3	25,43,478,	0,184,567,
#Partially deleted in new
chr3	132528201	132538508	chr3:132528201-132538508	0	+	132528201	132537216	789624	4	131,100,109,333,	0,2796,8956,9974,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr3	132558137	132659649	chr3:132558137-132659649	0	-	132558137	132558137	789624	19	948,110,117,155,72,763,99,108,139,78,127,107,122,139,165,162,126,100,47,	0,1695,2963,17634,18806,20658,45091,46960,60496,61330,68553,70202,72299,73203,81354,83834,84539,86659,101465,
#Boundary problem: need 45, got 0, diff 45, mapped 0.0
chr3	132558141	132722459	chr3:132558141-132722459	1	-	132697338	132722355	789624	45	944,110,117,155,72,763,99,108,139,78,161,127,107,122,139,165,162,126,95,177,116,126,241,128,76,242,190,123,95,165,139,83,103,144,115,104,174,75,157,161,134,153,151,126,497,	0,1691,2959,17630,18802,20654,45087,46956,60492,61326,62990,68549,70198,72295,73199,81350,83830,84535,86655,123772,124561,125257,126412,128118,129009,130508,130932,132386,133050,134512,136685,138589,139118,141776,142192,143288,146056,147598,149959,154984,156943,158615,160852,161563,163821,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr3	132558143	132660723	chr3:132558143-132660723	3	-	132558970	132659751	789624	20	942,110,117,155,72,86,67,99,108,139,78,127,107,122,139,165,162,126,100,1121,	0,1689,2957,17628,18800,20652,21348,45085,46954,60490,61324,68547,70196,72293,73197,81348,83828,84533,86653,101459,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr3	132558471	132660066	chr3:132558471-132660066	0	-	132605100	132659751	789624	18	614,110,117,155,72,86,67,99,108,127,107,122,139,165,162,126,100,464,	0,1361,2629,17300,18472,20324,21020,44757,46626,68219,69868,71965,72869,81020,83500,84205,86325,101131,
#Partially deleted in new
chr3	132558823	132660082	chr3:132558823-132660082	0	-	132558823	132558823	789624	18	262,110,117,72,763,99,108,139,78,127,107,122,139,165,162,126,100,480,	0,1009,2277,18120,19972,44405,46274,59810,60644,67867,69516,71613,72517,80668,83148,83853,85973,100779,
#Partially deleted in new
chr3	132576943	132618721	chr3:132576943-132618721	0	-	132578950	132618721	789624	6	72,261,67,99,108,88,	0,1852,2548,26285,28154,41690,
#Partially deleted in new
chr3	132578548	132605163	chr3:132578548-132605163	0	-	132578548	132578548	8553170	4	508,67,99,66,	0,943,24680,26549,
#Partially deleted in new
chr3	132578832	132620406	chr3:132578832-132620406	0	-	132578832	132578832	8553170	7	49,67,99,108,139,78,28,	0,659,24396,26265,39801,40635,41546,
#Partially deleted in new
chr3	132579178	132627074	chr3:132579178-132627074	0	-	132579178	132579178	8553170	6	380,99,108,139,78,384,	0,24050,25919,39455,40289,47512,
#Partially deleted in new
chr3	132597236	132602215	chr3:132597236-132602215	3	+	132600397	132601450	789624	2	87,1827,	0,3152,
#Partially deleted in new
chr3	132601387	132618967	chr3:132601387-132618967	0	+	132601387	132601450	789624	3	65,82,277,	0,3648,17303,
#Partially deleted in new
chr3	132618249	132659844	chr3:132618249-132659844	1	-	132618616	132659751	789624	11	523,78,127,107,122,139,165,162,126,100,242,	0,1218,8441,10090,12187,13091,21242,23722,24427,26547,41353,
#Partially deleted in new
chr3	132630444	132660062	chr3:132630444-132660062	0	-	132630444	132630444	8553170	2	114,460,	0,29158,
#Partially deleted in new
chr3	132644837	132684770	chr3:132644837-132684770	2	-	132644837	132684770	789624	5	59,177,116,126,217,	0,37076,37865,38561,39716,
#Partially deleted in new
chr3	132645830	132650383	chr3:132645830-132650383	7	+	132645830	132645830	16724991	5	131,84,368,343,591,	0,602,1290,2614,3962,
#Partially deleted in new
chr3	132654445	132678097	chr3:132654445-132678097	1	+	132665829	132676526	0	12	225,46,90,110,87,85,105,128,136,76,107,1655,	0,11377,11538,14372,15752,16519,17331,17604,20802,21159,21371,21997,
#Partially deleted in new
chr3	132659465	132677944	chr3:132659465-132677944	3	+	132660537	132676526	0	12	1233,46,90,110,87,85,105,128,136,76,107,1502,	0,6357,6518,9352,10732,11499,12311,12584,15782,16139,16351,16977,
#Deleted in new
chr3	132659917	132660945	chr3:132659917-132660945	0	+	132659917	132659917	8553170	2	133,761,	0,267,
#Partially deleted in new
chr3	132659945	132677189	chr3:132659945-132677189	1	+	132660537	132676857	789624	12	753,46,90,110,87,85,105,128,136,76,107,335,	0,5877,6038,8872,10252,11019,11831,12104,15302,15659,15871,16909,
#Partially deleted in new
chr3	132660309	132668927	chr3:132660309-132668927	0	+	132665829	132668927	789624	6	168,98,150,46,90,110,	0,291,589,5513,5674,8508,
#Partially deleted in new
chr3	132660342	132666151	chr3:132660342-132666151	0	+	132660342	132660342	8553170	3	356,46,168,	0,5480,5641,
#Partially deleted in new
chr3	132660359	132676753	chr3:132660359-132676753	1	+	132660537	132676462	789624	11	339,46,90,110,87,85,105,128,136,76,311,	0,5463,5624,8458,9838,10605,11417,11690,14888,15245,16083,
#Partially deleted in new
chr3	132660361	132677782	chr3:132660361-132677782	1	+	132665829	132676526	0	12	687,46,90,110,87,85,105,128,136,76,107,1340,	0,5461,5622,8456,9836,10603,11415,11688,14886,15243,15455,16081,
#Partially deleted in new
chr3	132660395	132671040	chr3:132660395-132671040	0	+	132660537	132668851	789624	4	303,110,87,76,	0,8422,9802,10569,
#Partially deleted in new
chr3	132660696	132671799	chr3:132660696-132671799	0	+	132661021	132671799	789624	5	352,110,87,85,23,	0,8121,9501,10268,11080,
#Partially deleted in new
chr3	132665738	132670284	chr3:132665738-132670284	0	+	132665829	132670284	789624	4	130,90,110,87,	0,245,3079,4459,
#Duplicated in new
chr3	132667257	132677782	chr3:132667257-132677782	0	+	132667257	132667257	8553170	8	1670,87,85,401,136,76,107,1340,	0,2940,3707,4519,7990,8347,8559,9185,
#Partially deleted in new
chr3	132670681	132672160	chr3:132670681-132672160	0	+	132670681	132670681	8553170	3	368,105,111,	0,1095,1368,
#Deleted in new
chr3	132675381	132676541	chr3:132675381-132676541	0	+	132675381	132675381	8553170	3	299,107,99,	0,435,1061,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	132680608	132694870	chr3:132680608-132694870	0	-	132680608	132680608	8553170	11	1482,116,126,1834,76,242,190,123,95,165,44,	0,2094,2790,3945,6542,8041,8465,9919,10583,12045,14218,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	132681281	132684823	chr3:132681281-132684823	0	-	132681281	132681281	8553170	3	1537,126,270,	0,2117,3272,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr3	132681430	132717355	chr3:132681430-132717355	0	-	132681430	132681430	8553170	23	660,116,126,241,128,76,242,190,123,95,1212,139,83,103,144,115,104,174,75,157,161,134,599,	0,1272,1968,3123,4829,5720,7219,7643,9097,9761,11223,13396,15300,15829,18487,18903,19999,22767,24309,26670,31695,33654,35326,
#Partially deleted in new
chr3	132681624	132722404	chr3:132681624-132722404	0	-	132697338	132722355	789624	25	466,116,126,241,128,76,242,190,123,95,165,139,103,144,115,104,174,75,157,161,134,153,151,126,148,	0,1078,1774,2929,4635,5526,7025,7449,8903,9567,11029,13202,15635,18293,18709,19805,22573,24115,26476,31501,33460,35132,37369,38080,40632,
#Partially deleted in new
chr3	132681627	132722442	chr3:132681627-132722442	3	-	132681909	132722355	0	27	463,116,126,241,128,76,242,190,123,95,165,139,83,103,98,144,115,104,174,75,157,161,134,153,151,126,480,	0,1075,1771,2926,4632,5523,7022,7446,8900,9564,11026,13199,15103,15632,17725,18290,18706,19802,22570,24112,26473,31498,33457,35129,37366,38077,40335,
#Deleted in new
chr3	132681627	132684685	chr3:132681627-132684685	0	-	132682084	132684685	789624	3	463,126,132,	0,1771,2926,
#Partially deleted in new
chr3	132691225	132695156	chr3:132691225-132695156	0	-	132691225	132691225	8553170	3	61,165,330,	0,1428,3601,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr3	132700003	132722007	chr3:132700003-132722007	0	-	132718067	132722007	789624	13	58,115,104,174,75,157,161,134,153,163,151,126,45,	0,330,1426,4194,5736,8097,13122,15081,16753,17951,18990,19701,21959,
#Partially deleted in new
chr3	132705673	132716813	chr3:132705673-132716813	0	-	132705673	132705673	8553170	5	141,157,161,134,57,	0,2427,7452,9411,11083,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	132717992	132721707	chr3:132717992-132721707	0	-	132717992	132717992	8553170	4	125,151,126,33,	0,1001,1712,3682,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	132721444	132722414	chr3:132721444-132722414	1	-	132721714	132722355	0	2	330,452,	0,518,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	132721749	132750777	chr3:132721749-132750777	1	+	132721749	132721749	789624	5	630,66,90,121,2050,	0,4611,5743,11574,26978,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	132722341	132874223	chr3:132722341-132874223	3	+	132722341	132722341	789624	11	38,90,121,81,148,167,276,769,61,73,683,	0,5151,10982,71192,77878,90367,94348,96005,105604,138206,151199,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	133015003	133037052	chr3:133015003-133037052	3	-	133015003	133015003	8553170	2	165,219,	0,21830,
#Partially deleted in new
chr3	133038390	133397792	chr3:133038390-133397792	3	+	133229311	133395986	789624	6	45,119,86,1410,155,1929,	0,7511,190875,341361,351789,357473,
#Partially deleted in new
chr3	133038390	133119384	chr3:133038390-133119384	0	+	133038390	133038390	8553170	4	45,119,44,347,	0,7511,35924,80647,
#Partially deleted in new
chr3	133038401	133396228	chr3:133038401-133396228	1	+	133229311	133395986	789624	6	34,119,82,1410,155,365,	0,7500,190868,341350,351778,357462,
#Partially deleted in new
chr3	133038407	133380126	chr3:133038407-133380126	0	+	133379858	133380126	789624	5	28,119,86,215,375,	0,7494,190858,339934,341344,
#Partially deleted in new
chr3	133038416	133380223	chr3:133038416-133380223	0	+	133379858	133380223	789624	6	19,119,44,86,134,472,	0,7485,35898,190849,264787,341335,
#Partially deleted in new
chr3	133041785	133380157	chr3:133041785-133380157	0	+	133229311	133380157	789624	4	70,119,86,406,	0,4116,187480,337966,
#Partially deleted in new
chr3	133119335	133379926	chr3:133119335-133379926	0	+	133229311	133379926	789624	4	173,76,86,175,	0,1544,109930,260416,
#Partially deleted in new
chr3	133124826	133397769	chr3:133124826-133397769	1	+	133229311	133395986	789624	4	323,86,155,1906,	0,104439,265353,271037,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	133125072	133389683	chr3:133125072-133389683	1	+	133229311	133386440	789624	4	77,86,1410,3260,	0,104193,254679,261351,
#Partially deleted in new
chr3	133192774	133380171	chr3:133192774-133380171	0	+	133229311	133380171	789624	3	53,82,420,	0,36495,186977,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	133246105	133257048	chr3:133246105-133257048	3	-	133246105	133246105	8553170	4	370,220,91,24,	0,2272,7256,10919,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	133246425	133257188	chr3:133246425-133257188	1	-	133246425	133246425	789624	3	2172,91,164,	0,6936,10599,
#Partially deleted in new
chr3	133379716	133396192	chr3:133379716-133396192	0	+	133379716	133379716	8553170	3	1445,155,329,	0,10463,16147,
#Partially deleted in new
chr3	133399994	133475193	chr3:133399994-133475193	3	+	133400083	133474972	789624	7	578,83,157,162,132,221,225,	0,47322,48494,50308,66833,72350,74974,
#Partially deleted in new
chr3	133400073	133404874	chr3:133400073-133404874	0	+	133400073	133400073	8553170	2	499,22,	0,4779,
#Partially deleted in new
chr3	133400461	133412550	chr3:133400461-133412550	0	+	133400461	133400461	8553170	2	111,263,	0,11826,
#Partially deleted in new
chr3	133409954	133410843	chr3:133409954-133410843	7	+	133409954	133409954	16724991	1	889,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	133429268	133455776	chr3:133429268-133455776	3	-	133429268	133429268	789624	5	441,171,115,135,32,	0,16136,19512,26060,26476,
#Partially deleted in new
chr3	133449065	133472515	chr3:133449065-133472515	0	+	133449065	133449065	8553170	4	195,162,132,171,	0,1237,17762,23279,
#Partially deleted in new
chr3	133450422	133475222	chr3:133450422-133475222	0	+	133450422	133450422	8553170	4	42,126,221,254,	0,16411,21922,24546,
#Partially deleted in new
chr3	133472341	133475206	chr3:133472341-133475206	0	+	133472341	133472341	8553170	2	224,238,	0,2627,
#Deleted in new
chr3	133490823	133491505	chr3:133490823-133491505	7	+	133490823	133490823	16724991	1	682,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	133543063	133543466	chr3:133543063-133543466	3	-	133543063	133543063	8553170	1	403,	0,
#Deleted in new
chr3	133546070	133546272	chr3:133546070-133546272	7	-	133546070	133546070	16724991	1	202,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	133551185	133551315	chr3:133551185-133551315	3	+	133551185	133551185	8553170	1	130,	0,
#Partially deleted in new
chr3	133573729	133590261	chr3:133573729-133590261	3	+	133574044	133588046	789624	5	555,77,149,160,2366,	0,1309,10272,12833,14166,
#Partially deleted in new
chr3	133573975	133587418	chr3:133573975-133587418	1	+	133574044	133587174	789624	5	309,77,149,160,260,	0,1063,10026,12587,13183,
#Partially deleted in new
chr3	133574079	133587971	chr3:133574079-133587971	0	+	133574079	133587971	789624	5	101,77,149,160,76,	0,959,9922,12483,13816,
#Partially deleted in new
chr3	133574433	133588052	chr3:133574433-133588052	1	+	133575104	133588046	789624	5	118,77,149,160,157,	0,605,9568,12129,13462,
#Partially deleted in new
chr3	133574456	133590260	chr3:133574456-133590260	1	+	133575104	133587174	789624	5	136,77,149,160,3099,	0,582,9545,12106,12705,
#Partially deleted in new
chr3	133574497	133584150	chr3:133574497-133584150	0	+	133575104	133584150	789624	3	245,77,149,	0,541,9504,
#Partially deleted in new
chr3	133574637	133586682	chr3:133574637-133586682	0	+	133575104	133586682	789624	4	105,77,146,120,	0,401,9367,11925,
#Partially deleted in new
chr3	133574637	133587216	chr3:133574637-133587216	1	+	133575104	133587174	789624	5	119,77,149,154,55,	0,401,9364,11931,12524,
#Partially deleted in new
chr3	133574647	133589162	chr3:133574647-133589162	1	+	133575104	133588359	789624	5	109,77,149,160,810,	0,391,9354,11915,13705,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	133598174	133608696	chr3:133598174-133608696	0	-	133598174	133598174	8553170	2	456,162,	0,10360,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	133598174	133608696	chr3:133598174-133608696	0	-	133598174	133598174	8553170	3	288,75,162,	0,381,10360,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr3	133600270	133662380	chr3:133600270-133662380	1	-	133601249	133661127	789624	28	1123,162,90,138,164,112,167,221,193,103,147,124,110,174,287,212,173,344,251,164,152,180,197,182,144,135,91,612,	0,8264,8602,10733,12118,16543,16889,17942,19884,22820,23040,23781,28091,28289,37605,39688,42929,43749,49112,49509,52192,53074,55019,56405,57527,58745,60773,61498,
#Partially deleted in new
chr3	133600572	133661893	chr3:133600572-133661893	3	-	133601249	133661127	0	28	821,162,90,138,164,112,167,221,193,103,147,124,110,174,287,212,173,344,251,164,167,180,197,182,144,135,91,125,	0,7962,8300,10431,11816,16241,16587,17640,19582,22518,22738,23479,27789,27987,37303,39386,42627,43447,48810,49207,51890,52772,54717,56103,57225,58443,60471,61196,
#Partially deleted in new
chr3	133616820	133617526	chr3:133616820-133617526	0	-	133616820	133616820	8553170	2	105,367,	0,339,
#Partially deleted in new
chr3	133618132	133628391	chr3:133618132-133628391	0	-	133618132	133618132	8553170	6	301,193,103,147,124,30,	0,2022,4958,5178,5919,10229,
#Partially deleted in new
chr3	133628106	133628730	chr3:133628106-133628730	0	-	133628106	133628106	8553170	2	365,171,	0,453,
#Partially deleted in new
chr3	133644096	133656758	chr3:133644096-133656758	0	-	133644096	133644096	8553170	6	267,251,164,180,197,83,	0,5286,5683,9248,11193,12579,
#Partially deleted in new
chr3	133644112	133649942	chr3:133644112-133649942	0	-	133644112	133644112	8553170	2	251,560,	0,5270,
#Partially deleted in new
chr3	133649604	133653468	chr3:133649604-133653468	0	-	133652518	133653468	789624	4	29,164,85,124,	0,175,2858,3740,
#Partially deleted in new
chr3	133661997	133754576	chr3:133661997-133754576	7	+	133661997	133661997	16724991	5	36,173,172,109,82,	0,26194,38884,91597,92497,
#Partially deleted in new
chr3	133661997	133707672	chr3:133661997-133707672	5	+	133661997	133661997	16724991	4	36,173,172,180,	0,26194,38884,45495,
#Partially deleted in new
chr3	133661998	133700242	chr3:133661998-133700242	4	+	133661998	133661998	16724991	3	35,173,338,	0,26193,37906,
#Deleted in new
chr3	133664925	133665034	chr3:133664925-133665034	3	+	133664925	133664925	8553170	1	109,	0,
#Partially deleted in new
chr3	133688191	133712802	chr3:133688191-133712802	5	+	133688191	133688191	16724991	10	173,109,135,147,179,312,124,96,156,142,	0,3531,4582,6024,11253,12690,13764,16032,21321,24469,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	133710075	133710167	chr3:133710075-133710167	7	-	133710075	133710075	16724991	1	92,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	133745955	133796640	chr3:133745955-133796640	3	+	133746440	133778620	0	17	528,173,109,177,133,56,179,178,155,94,33,156,136,65,185,190,18055,	0,2456,7639,8539,9407,10326,10875,11813,13219,18226,18919,20322,22073,24552,29477,31093,32630,
#Partially deleted in new
chr3	133746039	133754528	chr3:133746039-133754528	0	+	133748500	133754528	789624	4	210,173,109,34,	0,2372,7555,8455,
#Partially deleted in new
chr3	133746327	133753910	chr3:133746327-133753910	0	+	133746327	133746327	8553170	3	156,173,316,	0,2084,7267,
#Partially deleted in new
chr3	133746392	133754582	chr3:133746392-133754582	0	+	133746440	133753641	789624	4	91,258,109,88,	0,2019,7202,8102,
#Partially deleted in new
chr3	133746392	133754080	chr3:133746392-133754080	0	+	133746392	133746392	8553170	2	91,486,	0,7202,
#Partially deleted in new
chr3	133746392	133756923	chr3:133746392-133756923	0	+	133754550	133756923	789624	6	91,109,177,133,56,93,	0,7202,8102,8970,9889,10438,
#Partially deleted in new
chr3	133746392	133759293	chr3:133746392-133759293	0	+	133746440	133757842	789624	5	91,114,78,178,119,	0,2019,10539,11376,12782,
#Partially deleted in new
chr3	133746392	133755811	chr3:133746392-133755811	0	+	133746392	133746392	8553170	5	91,173,109,177,449,	0,2019,7202,8102,8970,
#Partially deleted in new
chr3	133746392	133755414	chr3:133746392-133755414	0	+	133746440	133754540	789624	5	91,173,109,169,52,	0,2019,7202,8110,8970,
#Partially deleted in new
chr3	133747149	133754663	chr3:133747149-133754663	0	+	133747149	133747149	8553170	4	135,173,109,169,	0,1262,6445,7345,
#Partially deleted in new
chr3	133748139	133754659	chr3:133748139-133754659	0	+	133748139	133748139	8553170	3	445,109,165,	0,5455,6355,
#Deleted in new
chr3	133760299	133762363	chr3:133760299-133762363	7	+	133760299	133760299	16724991	2	1080,837,	0,1227,
#Partially deleted in new
chr3	133766277	133778782	chr3:133766277-133778782	0	+	133766277	133775445	789624	7	156,136,65,61,185,190,197,	0,1751,4230,8601,9155,10771,12308,
#Partially deleted in new
chr3	133768031	133770956	chr3:133768031-133770956	0	+	133768031	133768031	8553170	2	133,449,	0,2476,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	133772751	133778784	chr3:133772751-133778784	0	+	133772751	133772751	8553170	2	2866,1736,	0,4297,
#Partially deleted in new
chr3	133784032	133821492	chr3:133784032-133821492	3	+	133805848	133819766	789624	8	112,327,95,78,83,137,55,1940,	0,21643,22576,23713,27084,31557,32845,35520,
#Partially deleted in new
chr3	133799439	133806139	chr3:133799439-133806139	3	-	133799439	133799439	8553170	2	2249,1052,	0,5648,
#Partially deleted in new
chr3	133805614	133807774	chr3:133805614-133807774	0	+	133805848	133807774	789624	3	388,95,29,	0,994,2131,
#Partially deleted in new
chr3	133806552	133819603	chr3:133806552-133819603	0	+	133806552	133806552	8553170	6	151,78,83,137,55,51,	0,1193,4564,9037,10325,13000,
#Partially deleted in new
chr3	133810261	133819909	chr3:133810261-133819909	0	+	133810261	133810261	8553170	4	938,137,55,357,	0,5328,6616,9291,
#Partially deleted in new
chr3	133811123	133825772	chr3:133811123-133825772	0	+	133811123	133819766	789624	5	76,137,55,268,381,	0,4466,5754,8429,14268,
#Partially deleted in new
chr3	133824238	133895816	chr3:133824238-133895816	3	-	133828787	133895466	0	8	4614,67,94,112,106,54,59,420,	0,10336,13927,15267,17046,17371,40345,71158,
#Partially deleted in new
chr3	133824242	133895595	chr3:133824242-133895595	1	-	133828787	133895466	0	9	3103,1425,67,94,112,106,54,59,199,	0,3185,10332,13923,15263,17042,17367,40341,71154,
#Partially deleted in new
chr3	133827747	133895633	chr3:133827747-133895633	1	-	133827864	133895466	789624	3	238,25,237,	0,36870,67649,
#Partially deleted in new
chr3	133828652	133895453	chr3:133828652-133895453	1	-	133828787	133885565	0	9	200,67,94,112,106,54,59,131,57,	0,5922,9513,10853,12632,12957,35931,56882,66744,
#Partially deleted in new
chr3	133838189	133895486	chr3:133838189-133895486	0	-	133838189	133864613	789624	7	70,112,106,54,59,95,90,	0,1316,3095,3420,26394,47381,57207,
#Partially deleted in new
chr3	133838248	133895836	chr3:133838248-133895836	0	-	133838248	133841630	789624	5	11,112,106,54,440,	0,1257,3036,3361,57148,
#Partially deleted in new
chr3	133841325	133894719	chr3:133841325-133894719	0	-	133841325	133864613	789624	4	65,54,59,328,	0,284,23258,53066,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	133928144	134030076	chr3:133928144-134030076	3	-	133934712	134029802	0	14	6686,124,65,164,166,190,165,79,137,99,228,163,138,370,	0,7629,10284,14460,16950,19111,20391,20748,23063,25518,26821,45518,51336,101562,
#Deleted in new
chr3	133928147	133929812	chr3:133928147-133929812	1	-	133928305	133928803	789624	1	1665,	0,
#Partially deleted in new
chr3	133934610	134029914	chr3:133934610-134029914	1	-	133934712	134029802	789624	13	220,124,65,164,166,190,165,79,137,99,163,138,208,	0,1163,3818,7994,10484,12645,13925,14282,16597,19052,39052,44870,95096,
#Partially deleted in new
chr3	133934638	134029923	chr3:133934638-134029923	0	-	133945117	134029802	789624	13	192,124,65,164,166,165,79,137,99,228,163,138,217,	0,1135,3790,7966,10456,13897,14254,16569,19024,20327,39024,44842,95068,
#Partially deleted in new
chr3	133942311	134029925	chr3:133942311-134029925	0	-	133942311	133942311	8553170	7	457,166,190,165,163,138,219,	0,2783,4944,6224,31351,37169,87395,
#Deleted in new
chr3	133948653	133949216	chr3:133948653-133949216	0	-	133948653	133948653	8553170	2	47,324,	0,239,
#Partially deleted in new
chr3	133950951	134029925	chr3:133950951-134029925	0	-	133950951	133950951	8553170	7	393,99,228,163,138,139,219,	0,2711,4014,22711,28529,47696,78755,
#Partially deleted in new
chr3	133955342	134029925	chr3:133955342-134029925	0	-	133955342	133955342	8553170	4	33,163,138,219,	0,18320,24138,74364,
#Partially deleted in new
chr3	133979546	134052184	chr3:133979546-134052184	0	-	133979546	133979546	8553170	2	72,94,	0,72544,
#Deleted in new
chr3	134055255	134057648	chr3:134055255-134057648	3	-	134055255	134055255	789624	2	401,239,	0,2154,
#Partially deleted in new
chr3	134065302	134183033	chr3:134065302-134183033	0	-	134075174	134183033	789624	7	488,156,179,160,110,133,32,	0,653,9732,110306,110627,112638,117699,
#Partially deleted in new
chr3	134157132	134250468	chr3:134157132-134250468	0	-	134158152	134250468	789624	15	1132,137,160,110,133,70,87,135,101,145,54,135,100,122,46,	0,2104,18476,18797,20808,25869,31704,34716,37949,45597,50339,52562,54375,65285,93290,
#Partially deleted in new
chr3	134157132	134250744	chr3:134157132-134250744	1	-	134158152	134250654	789624	15	1132,137,160,110,133,70,87,126,101,145,54,135,100,122,322,	0,2104,18476,18797,20808,25869,31704,34716,37949,45597,50339,52562,54375,65285,93290,
#Partially deleted in new
chr3	134157133	134181672	chr3:134157133-134181672	0	-	134157133	134157133	8553170	5	1131,137,160,110,3732,	0,2103,18475,18796,20807,
#Partially deleted in new
chr3	134157133	134250744	chr3:134157133-134250744	3	-	134158152	134250654	789624	15	1131,137,160,110,133,70,87,135,101,145,54,135,100,122,322,	0,2103,18475,18796,20807,25868,31703,34715,37948,45596,50338,52561,54374,65284,93289,
#Partially deleted in new
chr3	134159282	134191916	chr3:134159282-134191916	0	-	134175984	134191916	789624	6	91,160,110,70,87,68,	0,16326,16647,23719,29554,32566,
#Deleted in new
chr3	134170486	134171085	chr3:134170486-134171085	7	+	134170486	134170486	16724991	1	599,	0,
#Partially deleted in new
chr3	134175702	134183403	chr3:134175702-134183403	0	-	134175702	134175702	8553170	3	66,110,402,	0,227,7299,
#Partially deleted in new
chr3	134183001	134195339	chr3:134183001-134195339	0	-	134183001	134183001	8553170	4	70,87,126,258,	0,5835,8847,12080,
#Partially deleted in new
chr3	134202536	134207525	chr3:134202536-134207525	0	-	134202536	134202536	8553170	2	338,54,	0,4935,
#Partially deleted in new
chr3	134313575	134321171	chr3:134313575-134321171	3	+	134313575	134313575	789624	2	42,252,	0,7344,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	134347287	134349233	chr3:134347287-134349233	3	-	134347287	134347287	8553170	1	1946,	0,
#Partially deleted in new
chr3	134351851	134356561	chr3:134351851-134356561	7	-	134351851	134351851	16724991	2	262,187,	0,4523,
#Deleted in new
chr3	134351938	134352089	chr3:134351938-134352089	5	-	134351938	134351938	16724991	1	151,	0,
#Partially deleted in new
chr3	134355873	134374594	chr3:134355873-134374594	3	-	134357704	134371433	789624	10	1890,180,221,308,296,93,145,307,795,253,	0,2666,3409,4232,5638,9943,10409,11623,14826,18468,
#Partially deleted in new
chr3	134355876	134374447	chr3:134355876-134374447	1	-	134357704	134371433	789624	10	1887,177,221,308,296,93,145,307,795,106,	0,2663,3406,4229,5635,9940,10406,11620,14823,18465,
#Partially deleted in new
chr3	134355876	134375479	chr3:134355876-134375479	1	-	134357704	134375300	789624	10	1887,177,221,308,296,93,145,307,795,292,	0,2663,3406,4229,5635,9940,10406,11620,14823,19311,
#Partially deleted in new
chr3	134356184	134366841	chr3:134356184-134366841	0	-	134356184	134356184	8553170	7	1579,180,221,308,296,93,559,	0,2355,3098,3921,5327,9632,10098,
#Partially deleted in new
chr3	134357550	134374445	chr3:134357550-134374445	1	-	134357704	134371433	789624	10	213,177,221,302,296,93,145,307,795,104,	0,989,1732,2555,3961,8266,8732,9946,13149,16791,
#Deleted in new
chr3	134367653	134374560	chr3:134367653-134374560	0	-	134367653	134367653	8553170	3	150,182,219,	0,3659,6688,
#Deleted in new
chr3	134367752	134374562	chr3:134367752-134374562	0	-	134367752	134367752	8553170	3	51,305,221,	0,3437,6589,
#Deleted in new
chr3	134367803	134367862	chr3:134367803-134367862	3	-	134367803	134367803	5263520	1	59,	0,
#Deleted in new
chr3	134370839	134373788	chr3:134370839-134373788	0	-	134370839	134371433	789624	3	655,87,103,	0,2676,2846,
#Deleted in new
chr3	134370980	134373794	chr3:134370980-134373794	0	-	134370980	134371433	789624	2	514,109,	0,2705,
#Deleted in new
chr3	134370999	134371912	chr3:134370999-134371912	0	-	134370999	134371433	789624	2	495,32,	0,881,
#Deleted in new
chr3	134371051	134374918	chr3:134371051-134374918	0	-	134371051	134371433	789624	2	443,101,	0,3766,
#Deleted in new
chr3	134371063	134373797	chr3:134371063-134373797	0	-	134371063	134371433	789624	2	431,282,	0,2452,
#Deleted in new
chr3	134371334	134374254	chr3:134371334-134374254	0	-	134371334	134371433	789624	3	160,162,213,	0,347,2707,
#Deleted in new
chr3	134385196	134385494	chr3:134385196-134385494	7	+	134385196	134385196	16724991	1	298,	0,
#Deleted in new
chr3	134437604	134438211	chr3:134437604-134438211	7	+	134437604	134437604	16724991	1	607,	0,
#Deleted in new
chr3	134437826	134437906	chr3:134437826-134437906	3	+	134437826	134437826	5263520	1	80,	0,
#Partially deleted in new
chr3	134477705	134486023	chr3:134477705-134486023	1	-	134478589	134482904	0	3	1010,126,704,	0,5100,7614,
#Partially deleted in new
chr3	134477707	134486026	chr3:134477707-134486026	1	-	134478589	134482904	0	3	1008,126,75,	0,5098,8244,
#Partially deleted in new
chr3	134477710	134485989	chr3:134477710-134485989	1	-	134478589	134482904	0	3	1005,126,289,	0,5095,7990,
#Partially deleted in new
chr3	134478075	134486716	chr3:134478075-134486716	3	-	134478589	134482904	0	3	640,126,130,	0,4730,8511,
#Partially deleted in new
chr3	134478477	134483253	chr3:134478477-134483253	0	-	134478477	134478477	8553170	2	238,448,	0,4328,
#Partially deleted in new
chr3	134482741	134485703	chr3:134482741-134485703	0	-	134482741	134482741	8553170	2	190,384,	0,2578,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	134485720	134561886	chr3:134485720-134561886	0	+	134495320	134532912	8553170	16	332,69,178,96,253,114,234,140,117,138,115,198,87,206,156,510,	0,9575,21388,46124,47057,51434,59865,60428,60664,61614,63341,64342,66205,72421,73429,75656,
#Partially deleted in new
chr3	134485742	134561768	chr3:134485742-134561768	1	+	134495320	134561535	789624	12	310,69,178,96,123,114,234,140,115,198,87,392,	0,9553,21366,46102,47035,51412,59843,60406,63319,64320,66183,75634,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	134485790	134575011	chr3:134485790-134575011	1	+	134495320	134574891	789624	12	262,69,178,96,123,114,234,140,115,198,87,219,	0,9505,21318,46054,46987,51364,59795,60358,63271,64272,66135,89002,
#Partially deleted in new
chr3	134486044	134495372	chr3:134486044-134495372	0	+	134486044	134486044	8553170	2	158,77,	0,9251,
#Partially deleted in new
chr3	134486045	134537201	chr3:134486045-134537201	0	+	134495320	134537201	789624	6	116,69,178,96,123,47,	0,9250,21063,45799,46732,51109,
#Partially deleted in new
chr3	134486056	134561766	chr3:134486056-134561766	1	+	134495320	134561535	789624	13	146,69,178,96,123,114,234,140,138,115,198,87,390,	0,9239,21052,45788,46721,51098,59529,60092,61278,63005,64006,65869,75320,
#Partially deleted in new
chr3	134486056	134532824	chr3:134486056-134532824	0	+	134486056	134486056	8553170	5	146,69,178,96,65,	0,9239,21052,45788,46703,
#Partially deleted in new
chr3	134486204	134507253	chr3:134486204-134507253	0	+	134495320	134507253	789624	3	352,69,145,	0,9091,20904,
#Partially deleted in new
chr3	134486253	134561895	chr3:134486253-134561895	1	+	134495320	134561535	789624	15	303,69,178,96,123,114,234,140,138,115,198,87,206,280,519,	0,9042,20855,45591,46524,50901,59332,59895,61081,62808,63809,65672,71888,72896,75123,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	134495293	134565028	chr3:134495293-134565028	1	+	134495320	134561535	789624	14	71,178,96,123,114,234,140,138,115,198,87,206,280,3652,	0,11815,36551,37484,41861,50292,50855,52041,53768,54769,56632,62848,63856,66083,
#Deleted in new
chr3	134510530	134511413	chr3:134510530-134511413	7	-	134510530	134510530	16724991	1	883,	0,
#Partially deleted in new
chr3	134531848	134545777	chr3:134531848-134545777	0	+	134531848	134545777	789624	4	92,123,57,192,	0,929,5306,13737,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	134535342	134575017	chr3:134535342-134575017	0	+	134535342	134535342	8553170	2	1926,225,	0,39450,
#Partially deleted in new
chr3	134546155	134558343	chr3:134546155-134558343	0	+	134546155	134558343	789624	5	133,115,198,87,202,	0,2906,3907,5770,11986,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	134547386	134575013	chr3:134547386-134575013	0	+	134547386	134574891	789624	5	86,115,198,87,221,	0,1675,2676,4539,27406,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	134549092	134553549	chr3:134549092-134553549	0	+	134549092	134549092	8553170	3	84,198,1624,	0,970,2833,
#Deleted in new
chr3	134597800	134601119	chr3:134597800-134601119	0	+	134597800	134597800	8553170	2	184,303,	0,3016,
#Partially deleted in new
chr3	134597823	134628104	chr3:134597823-134628104	0	+	134597823	134597823	8553170	3	161,255,165,	0,17360,30116,
#Partially deleted in new
chr3	134597878	134779899	chr3:134597878-134779899	0	+	134597878	134597878	8553170	4	106,255,46,162,	0,17305,157780,181859,
#Partially deleted in new
chr3	134603137	134651018	chr3:134603137-134651018	1	-	134603578	134650960	789624	10	1337,191,189,118,109,83,63,75,63,194,	0,5511,7057,16010,17611,21915,24618,26483,44297,47687,
#Partially deleted in new
chr3	134603281	134651022	chr3:134603281-134651022	3	-	134603578	134650960	789624	11	1193,191,189,118,109,83,63,75,63,63,198,	0,5367,6913,15866,17467,21771,24474,26339,40034,44153,47543,
#Partially deleted in new
chr3	134603431	134651021	chr3:134603431-134651021	1	-	134604446	134650960	789624	10	1043,189,118,109,83,63,75,63,63,197,	0,6763,15716,17317,21621,24324,26189,39884,44003,47393,
#Partially deleted in new
chr3	134612959	134628003	chr3:134612959-134628003	0	-	134612959	134612959	8553170	6	237,118,109,83,63,115,	0,6188,7789,12093,14796,14929,
#Partially deleted in new
chr3	134615364	134951651	chr3:134615364-134951651	0	+	134925823	134951651	789624	4	74,144,65,281,	0,164373,310451,336006,
#Deleted in new
chr3	134780526	134780627	chr3:134780526-134780627	3	-	134780526	134780526	8553170	1	101,	0,
#Deleted in new
chr3	134783435	134783555	chr3:134783435-134783555	7	-	134783435	134783435	16724991	1	120,	0,
#Partially deleted in new
chr3	134795261	135260467	chr3:134795261-135260467	3	+	134795631	135259120	0	16	428,65,682,156,336,125,163,109,65,123,248,216,150,194,156,1456,	0,130554,156109,311186,337452,358890,366756,370706,371680,384598,397314,406212,445886,453054,454074,463750,
#Partially deleted in new
chr3	134795261	135132766	chr3:134795261-135132766	0	+	134795631	134978006	789624	6	428,65,682,112,156,53,	0,130554,156109,182704,311186,337452,
#Partially deleted in new
chr3	134795291	135259754	chr3:134795291-135259754	1	+	134795631	135259350	8553170	16	398,65,682,156,336,125,163,109,65,123,248,216,150,194,156,726,	0,130524,156079,311156,337422,358860,366726,370676,371650,384568,397284,406182,445856,453024,454044,463737,
#Partially deleted in new
chr3	134795631	135132815	chr3:134795631-135132815	0	+	134795631	134795631	8553170	5	58,65,348,156,102,	0,130184,155739,310816,337082,
#Partially deleted in new
chr3	134796140	134951441	chr3:134796140-134951441	0	+	134925823	134951441	789624	3	253,65,71,	0,129675,155230,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	134823847	134951621	chr3:134823847-134951621	0	+	134925823	134951621	789624	5	41,79,75,65,251,	0,16608,17627,101968,127523,
#Partially deleted in new
chr3	134852505	134951762	chr3:134852505-134951762	0	+	134925823	134951762	789624	3	97,65,392,	0,73310,98865,
#Partially deleted in new
chr3	135132791	135154402	chr3:135132791-135154402	0	+	135132791	135132791	8553170	2	258,251,	0,21360,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	135138468	135439862	chr3:135138468-135439862	3	-	135138468	135138468	8553170	7	1937,79,64,184,100,121,107,	0,8732,18669,19676,119667,122470,301287,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	135379045	135439888	chr3:135379045-135439888	0	-	135379045	135379045	8553170	3	382,67,133,	0,735,60710,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	135925890	135926167	chr3:135925890-135926167	7	+	135925890	135925890	16724991	1	277,	0,
#Partially deleted in new
chr3	135959274	135959590	chr3:135959274-135959590	7	-	135959274	135959274	16724991	1	316,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	135965672	136147891	chr3:135965672-136147891	1	+	136001498	136145166	0	14	177,2435,267,104,103,75,87,157,49,90,176,119,107,2849,	0,35386,61159,75186,83586,104805,112694,116592,122210,124905,136334,137585,140543,179370,
#Partially deleted in new
chr3	135965743	136145384	chr3:135965743-136145384	1	+	136027044	136145166	0	13	106,267,104,103,75,87,157,49,90,176,119,107,342,	0,61088,75115,83515,104734,112623,116521,122139,124834,136263,137514,140472,179299,
#Partially deleted in new
chr3	136022734	136145437	chr3:136022734-136145437	3	+	136023069	136145166	0	13	467,267,104,103,75,87,157,49,90,176,119,107,395,	0,4097,18124,26524,47743,55632,59530,65148,67843,79272,80523,83481,122308,
#Partially deleted in new
chr3	136026956	136087886	chr3:136026956-136087886	0	+	136026956	136079212	789624	8	142,104,103,75,87,134,157,4,	0,13902,22302,43521,51410,52193,55308,60926,
#Deleted in new
chr3	136055183	136055764	chr3:136055183-136055764	7	+	136055183	136055183	16724991	1	581,	0,
#Partially deleted in new
chr3	136087474	136087913	chr3:136087474-136087913	3	-	136087474	136087474	8553170	1	439,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	136102102	136106920	chr3:136102102-136106920	0	+	136102102	136102102	8553170	4	80,119,107,441,	0,1155,4113,4377,
#Partially deleted in new
chr3	136148921	136195846	chr3:136148921-136195846	3	-	136151146	136195113	0	2	3817,875,	0,46050,
#Partially deleted in new
chr3	136150626	136194554	chr3:136150626-136194554	1	-	136151146	136152658	0	2	2112,160,	0,43768,
#Partially deleted in new
chr3	136152195	136197241	chr3:136152195-136197241	0	-	136152195	136152658	789624	2	543,33,	0,45013,
#Partially deleted in new
chr3	136152211	136196589	chr3:136152211-136196589	0	-	136152211	136152658	789624	2	527,32,	0,44346,
#Partially deleted in new
chr3	136152373	136196327	chr3:136152373-136196327	0	-	136152373	136152658	789624	2	365,178,	0,43776,
#Deleted in new
chr3	136155548	136155996	chr3:136155548-136155996	7	+	136155548	136155548	16724991	1	448,	0,
#Deleted in new
chr3	136205539	136205915	chr3:136205539-136205915	7	-	136205539	136205539	16724991	1	376,	0,
#Partially deleted in new
chr3	136250305	136330169	chr3:136250305-136330169	3	+	136250375	136330026	789624	15	253,120,69,57,114,111,109,121,82,124,108,101,99,100,265,	0,5550,6249,10173,11646,33531,43450,47646,50724,66635,76497,76849,77328,78452,79599,
#Partially deleted in new
chr3	136250354	136330169	chr3:136250354-136330169	1	+	136250375	136330026	789624	14	204,120,57,114,111,109,121,82,124,108,101,99,100,265,	0,5501,10124,11597,33482,43401,47597,50675,66586,76448,76800,77279,78403,79550,
#Partially deleted in new
chr3	136250354	136330169	chr3:136250354-136330169	1	+	136250375	136330026	789624	16	204,120,69,57,114,111,109,121,82,124,60,108,101,99,100,265,	0,5501,6200,10124,11597,33482,43401,47597,50675,66586,75971,76448,76800,77279,78403,79550,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	136250354	136330169	chr3:136250354-136330169	1	+	136250375	136330026	789624	16	204,120,69,93,57,114,111,109,121,82,124,108,101,99,100,265,	0,5501,6200,9908,10124,11597,33482,43401,47597,50675,66586,76448,76800,77279,78403,79550,
#Partially deleted in new
chr3	136250354	136330169	chr3:136250354-136330169	1	+	136250375	136330026	789624	12	114,102,111,109,121,82,124,108,101,99,100,265,	0,11609,33482,43401,47597,50675,66586,76448,76800,77279,78403,79550,
#Partially deleted in new
chr3	136250354	136330169	chr3:136250354-136330169	1	+	136250375	136330026	789624	14	204,120,69,114,111,109,121,82,124,108,101,99,100,265,	0,5501,6200,11597,33482,43401,47597,50675,66586,76448,76800,77279,78403,79550,
#Partially deleted in new
chr3	136250354	136330169	chr3:136250354-136330169	0	+	136250375	136327653	789624	14	204,120,69,57,114,111,109,121,82,124,108,99,100,265,	0,5501,6200,10124,11597,33482,43401,47597,50675,66586,76448,77279,78403,79550,
#Partially deleted in new
chr3	136250354	136330169	chr3:136250354-136330169	1	+	136250375	136330026	789624	13	204,120,69,111,109,121,82,124,108,101,99,100,265,	0,5501,6200,33482,43401,47597,50675,66586,76448,76800,77279,78403,79550,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	136250357	136337895	chr3:136250357-136337895	1	+	136250375	136333476	789624	16	201,120,69,57,114,111,109,121,82,124,108,101,99,100,80,4494,	0,5498,6197,10121,11594,33479,43398,47594,50672,66583,76445,76797,77276,78400,79547,83044,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	136250358	136330170	chr3:136250358-136330170	1	+	136250375	136330026	789624	16	200,120,69,60,57,114,111,109,121,82,124,108,101,99,100,266,	0,5497,6196,8817,10120,11593,33478,43397,47593,50671,66582,76444,76796,77275,78399,79546,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	136250368	136262010	chr3:136250368-136262010	0	+	136250375	136262010	789624	6	190,87,120,69,57,59,	0,1934,5487,6186,10110,11583,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	136250374	136337896	chr3:136250374-136337896	1	+	136250375	136334307	789624	9	184,120,69,57,114,111,109,121,3617,	0,5481,6180,10104,11577,33462,43381,47577,83905,
#Partially deleted in new
chr3	136250390	136327731	chr3:136250390-136327731	0	+	136250390	136250390	8553170	8	168,111,109,121,82,124,108,98,	0,33446,43365,47561,50639,66550,76412,77243,
#Partially deleted in new
chr3	136251242	136283914	chr3:136251242-136283914	0	+	136251242	136283914	789624	6	50,120,69,57,114,78,	0,4613,5312,9236,10709,32594,
#Partially deleted in new
chr3	136255306	136262025	chr3:136255306-136262025	0	+	136255921	136262025	789624	5	227,120,69,57,74,	0,549,1248,5172,6645,
#Partially deleted in new
chr3	136255317	136283943	chr3:136255317-136283943	0	+	136255921	136283943	789624	6	67,120,69,57,114,107,	0,538,1237,5161,6634,28519,
#Partially deleted in new
chr3	136255320	136327093	chr3:136255320-136327093	0	+	136255320	136255320	8553170	11	97,120,69,57,114,111,109,121,82,124,291,	0,535,1234,5158,6631,28516,38435,42631,45709,61620,71482,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	136255856	136283901	chr3:136255856-136283901	0	+	136255856	136255856	8553170	6	119,146,69,57,114,65,	0,268,698,4622,6095,27980,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	136260149	136330169	chr3:136260149-136330169	0	+	136260149	136260149	8553170	11	386,114,111,109,121,82,124,453,99,100,265,	0,1802,23687,33606,37802,40880,56791,66653,67484,68608,69755,
#Partially deleted in new
chr3	136336232	136752368	chr3:136336232-136752368	3	-	136338253	136630898	789624	34	2045,81,115,111,175,206,129,149,102,140,175,93,81,88,71,204,90,93,104,118,115,108,80,99,124,74,152,205,77,97,165,103,112,174,	0,2137,4258,5208,7599,12925,21487,22915,27133,30710,32875,41427,62516,81652,84860,86177,86535,86719,97323,107054,115800,128648,136180,137306,141056,163990,166395,184980,205886,232532,268076,286913,294637,415962,
#Partially deleted in new
chr3	136336235	136752378	chr3:136336235-136752378	1	-	136338253	136630898	789624	33	2042,81,115,175,206,129,149,102,140,175,93,81,88,71,204,90,93,104,118,115,108,80,99,124,74,152,205,77,97,165,103,112,184,	0,2134,4255,7596,12922,21484,22912,27130,30707,32872,41424,62513,81649,84857,86174,86532,86716,97320,107051,115797,128645,136177,137303,141053,163987,166392,184977,205883,232529,268073,286910,294634,415959,
#Partially deleted in new
chr3	136337156	136752403	chr3:136337156-136752403	1	-	136338253	136502777	789624	33	1121,81,115,111,175,206,129,149,140,175,93,81,88,71,204,90,93,104,118,115,108,80,99,124,74,152,205,77,97,165,103,112,209,	0,1213,3334,4284,6675,12001,20563,21991,29786,31951,40503,61592,80728,83936,85253,85611,85795,96399,106130,114876,127724,135256,136382,140132,163066,165471,184056,204962,231608,267152,285989,293713,415038,
#Partially deleted in new
chr3	136337387	136752378	chr3:136337387-136752378	0	-	136591540	136630898	789624	36	890,81,115,111,175,206,129,149,140,175,93,81,88,71,204,90,93,104,118,115,108,80,99,124,74,152,168,205,77,97,125,105,165,103,112,184,	0,982,3103,4053,6444,11770,20332,21760,29555,31720,40272,61361,80497,83705,85022,85380,85564,96168,105899,114645,127493,135025,136151,139901,162835,165240,180860,183825,204731,231377,249414,254057,266921,285758,293482,414807,
#Partially deleted in new
chr3	136338094	136752372	chr3:136338094-136752372	1	-	136568797	136630898	789624	35	183,81,115,111,175,206,129,149,102,140,175,93,81,88,71,204,90,93,104,118,115,108,80,99,124,74,152,205,77,97,125,165,103,112,178,	0,275,2396,3346,5737,11063,19625,21053,25271,28848,31013,39565,60654,79790,82998,84315,84673,84857,95461,105192,113938,126786,134318,135444,139194,162128,164533,183118,204024,230670,248707,266214,285051,292775,414100,
#Partially deleted in new
chr3	136348788	136359189	chr3:136348788-136359189	0	-	136348788	136348788	8553170	3	575,129,42,	0,8931,10359,
#Partially deleted in new
chr3	136417557	136752377	chr3:136417557-136752377	0	-	136568797	136630898	789624	22	415,71,204,90,93,104,118,115,108,80,99,124,74,152,205,77,97,125,165,103,112,183,	0,3535,4852,5210,5394,15998,25729,34475,47323,54855,55981,59731,82665,85070,103655,124561,151207,169244,186751,205588,213312,334637,
#Partially deleted in new
chr3	136422956	136473603	chr3:136422956-136473603	0	-	136422956	136473603	789624	6	88,104,118,115,80,65,	0,10599,20330,29076,49456,50582,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	136430083	136430183	chr3:136430083-136430183	3	-	136430083	136430083	8553170	1	100,	0,
#Partially deleted in new
chr3	136499765	136604473	chr3:136499765-136604473	0	-	136499765	136499765	8553170	6	531,152,205,77,97,165,	0,2862,21447,42353,68999,104543,
#Partially deleted in new
chr3	136518042	136752366	chr3:136518042-136752366	1	-	136518392	136630898	789624	8	373,205,77,97,165,103,112,172,	0,3170,24076,50722,86266,105103,112827,234152,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	136609049	136609602	chr3:136609049-136609602	7	+	136609049	136609049	16724991	1	553,	0,
#Partially deleted in new
chr3	136721393	136721495	chr3:136721393-136721495	3	-	136721393	136721393	8553170	1	102,	0,
#Partially deleted in new
chr3	136736499	136737229	chr3:136736499-136737229	7	-	136736499	136736499	16724991	1	730,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	136752629	136755780	chr3:136752629-136755780	3	+	136752629	136752629	8553170	1	3151,	0,
#Partially deleted in new
chr3	136808550	136809623	chr3:136808550-136809623	7	-	136808550	136808550	16724991	2	532,177,	0,896,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	136818646	136843322	chr3:136818646-136843322	0	+	136818646	136818646	8553170	2	1866,971,	0,23705,
#Partially deleted in new
chr3	136819018	136855892	chr3:136819018-136855892	3	+	136854460	136855699	789624	2	610,1450,	0,35424,
#Partially deleted in new
chr3	136819083	136855888	chr3:136819083-136855888	1	+	136854460	136855699	789624	2	131,1446,	0,35359,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	136837337	136839021	chr3:136837337-136839021	3	-	136837337	136837337	8553170	1	1684,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	136841725	136862037	chr3:136841725-136862037	3	-	136841725	136841725	789624	3	844,59,291,	0,4802,20021,
#Partially deleted in new
chr3	136842190	136862049	chr3:136842190-136862049	1	-	136842190	136842190	789624	4	379,59,86,303,	0,4337,16327,19556,
#Partially deleted in new
chr3	136842456	136862054	chr3:136842456-136862054	0	-	136842456	136842456	8553170	3	113,59,440,	0,4071,19158,
#Partially deleted in new
chr3	136862207	136949126	chr3:136862207-136949126	1	+	136928001	136948453	0	4	112,244,713,868,	0,65776,83375,86051,
#Partially deleted in new
chr3	136862207	136949126	chr3:136862207-136949126	3	+	136928001	136948453	0	4	146,244,713,868,	0,65776,83375,86051,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	136862232	136945743	chr3:136862232-136945743	0	+	136928001	136945743	789624	4	87,95,244,161,	0,5198,65751,83350,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	136862241	136945702	chr3:136862241-136945702	0	+	136928001	136945702	789624	4	112,95,244,120,	0,5189,65742,83341,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	136862263	136928227	chr3:136862263-136928227	0	+	136928001	136928227	789624	3	90,223,244,	0,26815,65720,
#Partially deleted in new
chr3	136862266	136928473	chr3:136862266-136928473	0	+	136862266	136862266	8553170	2	87,490,	0,65717,
#Partially deleted in new
chr3	136862266	136928724	chr3:136862266-136928724	0	+	136862266	136862266	8553170	2	53,741,	0,65717,
#Partially deleted in new
chr3	136862297	136946218	chr3:136862297-136946218	0	+	136928001	136946218	789624	4	22,244,170,90,	0,65686,83285,83831,
#Deleted in new
chr3	136899075	136900076	chr3:136899075-136900076	7	-	136899075	136899075	16724991	1	1001,	0,
#Partially deleted in new
chr3	136928038	136946214	chr3:136928038-136946214	0	+	136928038	136946214	789624	3	189,170,63,	0,17544,18113,
#Partially deleted in new
chr3	136930469	136949823	chr3:136930469-136949823	1	+	136930560	136948453	0	3	125,713,1565,	0,15113,17789,
#Partially deleted in new
chr3	136930501	136948432	chr3:136930501-136948432	0	+	136930560	136948432	789624	4	93,170,144,174,	0,15081,15650,17757,
#Partially deleted in new
chr3	136945724	136947047	chr3:136945724-136947047	0	+	136945724	136945724	8553170	2	571,119,	0,1204,
#Partially deleted in new
chr3	136946229	136989494	chr3:136946229-136989494	0	+	136946229	136946229	8553170	3	66,307,54,	0,11665,43211,
#Partially deleted in new
chr3	136957864	137011085	chr3:136957864-137011085	3	+	136958113	137010223	0	7	337,127,191,125,151,143,973,	0,22601,24295,31576,34073,37549,52248,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	136958008	137011085	chr3:136958008-137011085	0	+	136958113	136980392	789624	6	193,262,191,125,143,973,	0,22322,24151,31432,37405,52104,
#Partially deleted in new
chr3	136959124	136982196	chr3:136959124-136982196	3	-	136959124	136959124	8553170	2	428,134,	0,22938,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	136980473	137011079	chr3:136980473-137011079	0	+	136980473	136986746	789624	7	119,191,91,125,151,143,967,	0,1686,6220,8967,11464,14940,29639,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	137518133	137518255	chr3:137518133-137518255	7	-	137518133	137518133	16724991	1	122,	0,
#Deleted in new
chr3	137535571	137536142	chr3:137535571-137536142	7	-	137535571	137535571	16724991	1	571,	0,
#Partially deleted in new
chr3	137723773	137724543	chr3:137723773-137724543	7	+	137723773	137723773	16724991	2	147,455,	0,315,
#Deleted in new
chr3	137764283	137766338	chr3:137764283-137766338	3	+	137764784	137765507	789624	1	2055,	0,
#Partially deleted in new
chr3	137771948	137780878	chr3:137771948-137780878	3	+	137771948	137771948	789624	5	182,91,75,123,817,	0,2575,3327,4333,8113,
#Deleted in new
chr3	137774540	137777596	chr3:137774540-137777596	1	+	137774540	137774540	8553170	4	74,264,123,164,	0,546,1741,2892,
#Deleted in new
chr3	137774543	137777596	chr3:137774543-137777596	0	+	137774543	137774543	8553170	4	71,75,123,164,	0,732,1738,2889,
#Deleted in new
chr3	137774991	137777596	chr3:137774991-137777596	0	+	137774991	137774991	8553170	3	359,123,164,	0,1290,2441,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	137791972	137796678	chr3:137791972-137796678	3	+	137791972	137791972	8553170	1	4706,	0,
#Deleted in new
chr3	137880294	137882237	chr3:137880294-137882237	7	+	137880294	137880294	16724991	1	1943,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	137998734	138033655	chr3:137998734-138033655	1	+	137998868	138031141	789624	5	354,165,118,111,2686,	0,24923,25872,31062,32235,
#Partially deleted in new
chr3	138004648	138005122	chr3:138004648-138005122	3	-	138004648	138004648	8553170	1	474,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	138009999	138033649	chr3:138009999-138033649	3	+	138010225	138031141	789624	5	446,165,118,111,2680,	0,13658,14607,19797,20970,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	138010215	138032502	chr3:138010215-138032502	0	+	138010225	138029852	789624	4	230,165,111,1533,	0,13442,19581,20754,
#Partially deleted in new
chr3	138061989	138115609	chr3:138061989-138115609	3	-	138062815	138103971	789624	16	988,140,170,217,193,134,54,31,141,63,129,162,122,85,582,282,	0,2638,5541,6161,9653,15509,18577,19744,22123,24971,26389,30393,32872,35773,41481,53338,
#Partially deleted in new
chr3	138064402	138067640	chr3:138064402-138067640	0	-	138064432	138067640	789624	2	365,110,	0,3128,
#Partially deleted in new
chr3	138068300	138092465	chr3:138068300-138092465	0	-	138068300	138068300	8553170	7	67,134,54,31,63,129,83,	0,9198,12266,13433,18660,20078,24082,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	138068982	138113480	chr3:138068982-138113480	1	-	138069159	138103971	789624	14	182,193,134,54,31,141,63,129,162,122,85,582,137,92,	0,2660,8516,11584,12751,15130,17978,19396,23400,25879,28780,34488,43381,44406,
#Partially deleted in new
chr3	138080348	138081829	chr3:138080348-138081829	0	-	138080348	138080348	8553170	2	272,96,	0,1385,
#Partially deleted in new
chr3	138086973	138088900	chr3:138086973-138088900	0	-	138086973	138086973	8553170	2	50,522,	0,1405,
#Partially deleted in new
chr3	138092351	138103778	chr3:138092351-138103778	0	-	138092351	138092351	8553170	4	193,122,85,308,	0,2510,5411,11119,
#Deleted in new
chr3	138101477	138102917	chr3:138101477-138102917	7	-	138101477	138101477	16724991	1	1440,	0,
#Partially deleted in new
chr3	138103770	138115611	chr3:138103770-138115611	0	-	138103770	138103971	789624	3	282,137,152,	0,8593,11689,
#Partially deleted in new
chr3	138103853	138115818	chr3:138103853-138115818	0	-	138103853	138103971	789624	3	199,137,491,	0,8510,11474,
#Partially deleted in new
chr3	138123717	138132387	chr3:138123717-138132387	3	-	138124263	138131256	789624	3	1161,434,176,	0,7131,8494,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	138161011	138174949	chr3:138161011-138174949	3	-	138161888	138174795	789624	8	1571,146,81,225,86,81,125,351,	0,2337,2766,6069,9095,10621,12490,13587,
#Deleted in new
chr3	138163348	138164203	chr3:138163348-138164203	0	-	138163348	138163348	8553170	2	146,426,	0,429,
#Partially deleted in new
chr3	138163348	138174859	chr3:138163348-138174859	0	-	138167270	138174795	789624	5	146,81,225,125,261,	0,429,3732,10153,11250,
#Partially deleted in new
chr3	138187247	138298384	chr3:138187247-138298384	1	+	138187554	138295892	789624	21	352,77,72,143,98,81,76,91,61,201,96,83,82,87,93,150,96,96,73,94,2526,	0,22569,34678,36141,36388,47786,50061,50234,52220,54535,57840,76491,76883,79907,82792,85719,87201,97183,101800,103298,108611,
#Partially deleted in new
chr3	138187266	138296549	chr3:138187266-138296549	1	+	138188527	138295892	789624	23	333,76,77,72,143,98,93,81,76,91,61,201,96,83,82,87,93,150,96,96,73,94,691,	0,1188,22550,34659,36122,36369,41651,47767,50042,50215,52201,54516,57821,76472,76864,79888,82773,85700,87182,97164,101781,103279,108592,
#Partially deleted in new
chr3	138187283	138298389	chr3:138187283-138298389	3	+	138187554	138295892	789624	22	316,77,72,143,98,93,81,76,91,61,201,96,83,82,87,93,150,96,96,73,94,2531,	0,22533,34642,36105,36352,41634,47750,50025,50198,52184,54499,57804,76455,76847,79871,82756,85683,87165,97147,101764,103262,108575,
#Partially deleted in new
chr3	138187300	138296394	chr3:138187300-138296394	1	+	138221929	138295892	789624	22	299,76,72,143,98,93,81,76,91,61,201,96,83,82,87,93,150,96,96,73,94,536,	0,1154,34625,36088,36335,41617,47733,50008,50181,52167,54482,57787,76438,76830,79854,82739,85666,87148,97130,101747,103245,108558,
#Partially deleted in new
chr3	138187304	138235100	chr3:138187304-138235100	0	+	138187554	138235100	789624	8	50,131,77,72,143,98,93,67,	0,164,22512,34621,36084,36331,41613,47729,
#Partially deleted in new
chr3	138187317	138228999	chr3:138187317-138228999	0	+	138221929	138228999	789624	6	282,130,72,143,98,82,	0,1083,34608,36071,36318,41600,
#Partially deleted in new
chr3	138187341	138246887	chr3:138187341-138246887	1	+	138188527	138245249	789624	13	258,130,77,72,143,98,93,81,76,91,61,201,1800,	0,1059,22475,34584,36047,36294,41576,47692,49967,50140,52126,54441,57746,
#Partially deleted in new
chr3	138187349	138245635	chr3:138187349-138245635	1	+	138221929	138245249	789624	11	250,72,143,98,93,81,76,91,61,201,548,	0,34576,36039,36286,41568,47684,49959,50132,52118,54433,57738,
#Partially deleted in new
chr3	138187516	138296254	chr3:138187516-138296254	1	+	138187554	138295892	789624	21	83,77,72,143,98,93,81,76,91,61,96,83,82,87,93,150,96,96,73,94,396,	0,22300,34409,35872,36119,41401,47517,49792,49965,51951,57571,76222,76614,79638,82523,85450,86932,96914,101531,103029,108342,
#Partially deleted in new
chr3	138187527	138295933	chr3:138187527-138295933	1	+	138221929	138295892	789624	20	72,72,143,98,81,76,91,61,201,96,83,82,87,93,150,96,96,73,94,75,	0,34398,35861,36108,47506,49781,49954,51940,54255,57560,76211,76603,79627,82512,85439,86921,96903,101520,103018,108331,
#Partially deleted in new
chr3	138187528	138246857	chr3:138187528-138246857	1	+	138188527	138245249	789624	13	71,76,77,72,143,98,93,81,76,91,61,201,1770,	0,926,22288,34397,35860,36107,41389,47505,49780,49953,51939,54254,57559,
#Partially deleted in new
chr3	138187530	138245681	chr3:138187530-138245681	1	+	138187554	138245249	789624	12	69,77,72,143,98,93,81,76,91,61,201,594,	0,22286,34395,35858,36105,41387,47503,49778,49951,51937,54252,57557,
#Partially deleted in new
chr3	138187546	138237572	chr3:138187546-138237572	0	+	138187554	138237572	789624	8	53,77,72,143,98,81,76,91,	0,22270,34379,35842,36089,47487,49762,49935,
#Partially deleted in new
chr3	138187551	138267229	chr3:138187551-138267229	0	+	138187554	138267229	789624	12	48,72,93,81,76,91,61,201,96,83,82,75,	0,34374,41366,47482,49757,49930,51916,54231,57536,76187,76579,79603,
#Partially deleted in new
chr3	138187775	138209890	chr3:138187775-138209890	0	+	138188527	138209890	789624	2	755,74,	0,22041,
#Partially deleted in new
chr3	138223388	138229051	chr3:138223388-138229051	0	+	138223388	138223388	8553170	3	143,98,134,	0,247,5529,
#Partially deleted in new
chr3	138223635	138245682	chr3:138223635-138245682	0	+	138223635	138245249	789624	3	98,81,595,	0,11398,21452,
#Partially deleted in new
chr3	138223635	138245330	chr3:138223635-138245330	0	+	138223635	138239472	789624	6	98,93,81,76,61,243,	0,5282,11398,13673,15832,21452,
#Partially deleted in new
chr3	138237278	138296541	chr3:138237278-138296541	0	+	138237278	138237278	8553170	14	294,61,201,96,83,82,87,93,150,96,96,73,94,683,	0,2189,4504,7809,26460,26852,29876,32761,35688,37170,47152,51769,53267,58580,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	138238019	138246472	chr3:138238019-138246472	0	+	138238019	138238019	8553170	3	1509,201,1385,	0,3763,7068,
#Partially deleted in new
chr3	138261436	138324932	chr3:138261436-138324932	1	-	138262539	138324897	789624	9	1150,137,155,93,83,76,72,104,60,	0,42070,43436,44567,44961,52895,56711,58041,63436,
#Partially deleted in new
chr3	138262090	138324929	chr3:138262090-138324929	0	-	138303571	138324897	789624	8	496,137,93,83,76,72,104,57,	0,41416,43913,44307,52241,56057,57387,62782,
#Partially deleted in new
chr3	138262539	138329789	chr3:138262539-138329789	1	-	138262539	138329335	789624	10	47,137,155,93,83,76,104,58,37,35,	0,40967,42333,43464,43858,51792,56938,62333,66763,67215,
#Partially deleted in new
chr3	138263510	138298373	chr3:138263510-138298373	0	+	138263510	138263510	8553170	9	702,87,93,150,96,96,73,94,2515,	0,3644,6529,9456,10938,20920,25537,27035,32348,
#Partially deleted in new
chr3	138273079	138288014	chr3:138273079-138288014	0	+	138273079	138287673	789624	4	37,96,96,383,	0,1369,11351,14552,
#Partially deleted in new
chr3	138289020	138290628	chr3:138289020-138290628	0	+	138289020	138289020	8553170	2	100,83,	0,1525,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	138301379	138329363	chr3:138301379-138329363	3	-	138301639	138329335	789624	11	325,137,155,93,83,76,117,72,104,58,61,	0,2127,3493,4624,5018,12952,14147,16768,18098,23493,27923,
#Partially deleted in new
chr3	138303270	138319580	chr3:138303270-138319580	0	-	138303571	138319580	789624	6	373,93,83,76,72,103,	0,2733,3127,11061,14877,16207,
#Partially deleted in new
chr3	138305975	138329844	chr3:138305975-138329844	0	-	138305975	138305975	8553170	8	121,83,76,72,104,58,37,28,	0,422,8356,12172,13502,18897,23327,23841,
#Partially deleted in new
chr3	138306033	138329804	chr3:138306033-138329804	0	-	138306033	138329335	789624	9	63,83,76,117,72,104,58,37,50,	0,364,8298,9493,12114,13444,18839,23269,23721,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	138319477	138329823	chr3:138319477-138329823	0	-	138324415	138329335	789624	5	104,420,58,37,69,	0,4697,5395,9825,10277,
#Partially deleted in new
chr3	138324872	138329823	chr3:138324872-138329823	0	-	138324872	138329335	789624	2	58,521,	0,4430,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	138347647	138405534	chr3:138347647-138405534	1	+	138397358	138402269	789624	5	678,154,100,80,3365,	0,49676,50821,52886,54522,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	138347696	138405533	chr3:138347696-138405533	3	+	138372883	138402269	789624	6	629,211,154,100,80,3364,	0,25169,49627,50772,52837,54473,
#Partially deleted in new
chr3	138348471	138403131	chr3:138348471-138403131	1	+	138372883	138402269	789624	6	296,211,154,100,80,962,	0,24394,48852,49997,52062,53698,
#Partially deleted in new
chr3	138348665	138405534	chr3:138348665-138405534	1	+	138397358	138402269	789624	5	102,154,100,80,3365,	0,48658,49803,51868,53504,
#Partially deleted in new
chr3	138348693	138402192	chr3:138348693-138402192	0	+	138397358	138402192	789624	5	74,154,100,80,23,	0,48630,49775,51840,53476,
#Partially deleted in new
chr3	138348849	138403186	chr3:138348849-138403186	1	+	138397358	138402269	789624	5	183,154,100,80,1017,	0,48474,49619,51684,53320,
#Partially deleted in new
chr3	138348849	138372953	chr3:138348849-138372953	0	+	138372883	138372953	789624	2	183,88,	0,24016,
#Deleted in new
chr3	138348906	138349951	chr3:138348906-138349951	0	+	138348906	138348906	8553170	2	126,268,	0,777,
#Deleted in new
chr3	138349145	138350422	chr3:138349145-138350422	0	+	138349145	138349145	8553170	2	234,739,	0,538,
#Partially deleted in new
chr3	138349261	138402362	chr3:138349261-138402362	1	+	138372883	138402269	789624	6	118,211,154,100,80,193,	0,23604,48062,49207,51272,52908,
#Partially deleted in new
chr3	138400208	138402193	chr3:138400208-138402193	0	+	138400208	138400208	8553170	2	405,24,	0,1961,
#Partially deleted in new
chr3	138434585	138477060	chr3:138434585-138477060	0	+	138434585	138434585	8553170	22	540,42,135,77,67,90,56,121,171,83,49,90,63,63,69,967,731,99,132,106,50,243,	0,17462,20608,22982,24601,25359,26025,27500,29759,30753,32975,33519,34069,34233,34850,35474,37777,38950,39635,41637,41857,42232,
#Partially deleted in new
chr3	138434612	138478414	chr3:138434612-138478414	3	+	138434798	138476854	789624	23	513,42,135,77,67,90,56,121,171,83,49,90,63,63,69,87,150,497,99,132,106,50,1597,	0,17435,20581,22955,24574,25332,25998,27473,29732,30726,32948,33492,34042,34206,34823,35447,36264,37750,38923,39608,41610,41830,42205,
#Partially deleted in new
chr3	138434615	138472833	chr3:138434615-138472833	0	+	138434798	138469503	789624	18	510,42,135,77,67,90,56,121,171,83,49,90,63,67,69,87,150,471,	0,17432,20578,22952,24571,25329,25995,27470,29729,30723,32945,33489,34039,34203,34820,35444,36261,37747,
#Partially deleted in new
chr3	138434624	138462473	chr3:138434624-138462473	1	+	138434798	138462224	789624	8	501,42,135,77,67,90,56,388,	0,17423,20569,22943,24562,25320,25986,27461,
#Deleted in new
chr3	138469242	138470259	chr3:138469242-138470259	0	+	138469242	138469242	8553170	2	262,200,	0,817,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	138473153	138481686	chr3:138473153-138481686	0	+	138473153	138473153	8553170	5	481,70,106,50,3913,	0,1129,3069,3289,4620,
#Deleted in new
chr3	138473535	138474652	chr3:138473535-138474652	0	+	138473535	138473535	8553170	2	99,432,	0,685,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	138482064	138485755	chr3:138482064-138485755	3	+	138482064	138482064	8553170	1	3691,	0,
#Partially deleted in new
chr3	138494343	138594356	chr3:138494343-138594356	3	-	138495014	138572927	789624	18	733,80,115,169,147,171,106,75,89,88,57,170,181,124,91,74,103,159,	0,3687,5766,6055,6391,10951,14095,31146,34855,35031,38170,42834,75974,76690,76922,78515,97510,99854,
#Partially deleted in new
chr3	138494757	138594319	chr3:138494757-138594319	1	-	138495014	138591862	789624	14	319,80,115,169,147,171,106,75,89,88,57,170,103,122,	0,3273,5352,5641,5977,10537,13681,30732,34441,34617,37756,42420,97096,99440,
#Partially deleted in new
chr3	138495002	138594224	chr3:138495002-138594224	1	-	138495014	138572927	789624	18	74,80,115,169,147,171,106,75,89,88,57,170,181,124,91,126,103,27,	0,3028,5107,5396,5732,10292,13436,30487,34196,34372,37511,42175,75315,76031,76263,77856,96851,99195,
#Partially deleted in new
chr3	138495012	138594339	chr3:138495012-138594339	1	-	138495014	138572873	789624	18	64,80,115,169,147,171,106,75,89,88,57,170,181,124,91,56,103,142,	0,3018,5097,5386,5722,10282,13426,30477,34186,34362,37501,42165,75305,76021,76253,77846,96841,99185,
#Partially deleted in new
chr3	138496909	138500180	chr3:138496909-138500180	0	-	138497262	138500180	789624	3	418,80,71,	0,1121,3200,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	138499883	138594248	chr3:138499883-138594248	1	-	138500096	138572927	789624	16	341,169,147,171,106,75,89,88,57,170,181,124,91,74,103,51,	0,515,851,5411,8555,25606,29315,29491,32630,37294,70434,71150,71382,72975,91970,94314,
#Partially deleted in new
chr3	138525489	138594238	chr3:138525489-138594238	0	-	138525489	138591862	789624	10	75,89,88,57,170,181,124,88,103,41,	0,3709,3885,7024,11688,44828,45544,45776,66364,68708,
#Partially deleted in new
chr3	138529228	138594345	chr3:138529228-138594345	0	-	138529228	138591862	789624	9	59,88,57,170,181,124,91,103,148,	0,146,3285,7949,41089,41805,42037,62625,64969,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	138531506	138594254	chr3:138531506-138594254	0	-	138531506	138531506	8553170	9	117,57,170,181,124,91,74,103,57,	0,1007,5671,38811,39527,39759,41352,60347,62691,
#Partially deleted in new
chr3	138536918	138591956	chr3:138536918-138591956	1	-	138537173	138572927	789624	6	429,181,124,91,126,103,	0,33399,34115,34347,35940,54935,
#Partially deleted in new
chr3	138570434	138594538	chr3:138570434-138594538	0	-	138570434	138572927	789624	6	64,124,91,74,103,95,	0,599,831,2424,21419,24009,
#Partially deleted in new
chr3	138572858	138594129	chr3:138572858-138594129	0	-	138572858	138572927	789624	3	74,103,421,	0,18995,20850,
#Partially deleted in new
chr3	138591865	138594254	chr3:138591865-138594254	0	-	138591865	138591865	8553170	3	91,100,57,	0,1115,2332,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	138608605	138631139	chr3:138608605-138631139	0	+	138608605	138608605	8553170	5	332,434,133,229,2033,	0,1998,12801,13582,20501,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	138608608	138633376	chr3:138608608-138633376	1	+	138610957	138633079	0	6	329,434,133,229,50,447,	0,1995,12798,13579,20498,24321,
#Partially deleted in new
chr3	138608699	138633376	chr3:138608699-138633376	1	+	138619726	138633079	0	6	238,60,133,229,50,447,	0,11011,12707,13488,20407,24230,
#Partially deleted in new
chr3	138608850	138633376	chr3:138608850-138633376	3	+	138621428	138633079	0	5	87,133,229,50,447,	0,12556,13337,20256,24079,
#Partially deleted in new
chr3	138608939	138629332	chr3:138608939-138629332	0	+	138608939	138608939	8553170	4	207,133,205,226,	0,12467,13248,20167,
#Partially deleted in new
chr3	138609071	138633369	chr3:138609071-138633369	1	+	138621428	138633079	0	5	75,133,229,50,440,	0,12335,13116,20035,23858,
#Partially deleted in new
chr3	138621209	138633103	chr3:138621209-138633103	1	+	138621428	138633079	0	5	55,133,229,50,174,	0,197,978,7897,11720,
#Partially deleted in new
chr3	138621224	138629151	chr3:138621224-138629151	0	+	138621428	138629151	789624	4	58,133,229,45,	0,182,963,7882,
#Partially deleted in new
chr3	138621272	138622305	chr3:138621272-138622305	0	+	138621272	138621272	8553170	2	267,118,	0,915,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	138643873	138644694	chr3:138643873-138644694	7	-	138643873	138643873	16724991	2	80,424,	0,397,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr3	138652698	138759359	chr3:138652698-138759359	1	-	138655388	138759343	789624	22	2828,133,146,124,168,79,110,179,100,144,122,189,51,131,97,252,78,171,180,224,226,187,	0,3443,4991,11207,12337,29268,30979,31926,36176,38301,42087,46208,51744,54460,59509,61769,80662,81935,85008,89859,103055,106474,
#Partially deleted in new
chr3	138654017	138834752	chr3:138654017-138834752	3	-	138655388	138759343	789624	23	1509,133,146,124,168,79,110,179,100,144,122,189,51,131,97,252,78,171,180,224,226,187,58,	0,2124,3672,9888,11018,27949,29660,30607,34857,36982,40768,44889,50425,53141,58190,60450,79343,80616,83689,88540,101736,105155,180677,
#Partially deleted in new
chr3	138654019	138712304	chr3:138654019-138712304	0	-	138704485	138712304	789624	14	1507,133,146,124,168,94,110,179,100,144,122,189,51,97,	0,2122,3670,9886,11016,27947,29658,30605,34855,36980,40766,44887,50423,58188,
#Partially deleted in new
chr3	138654021	138714486	chr3:138654021-138714486	1	-	138655388	138699014	789624	15	1505,133,146,124,168,94,110,179,100,144,122,189,51,97,19,	0,2120,3668,9884,11014,27945,29656,30603,34853,36978,40764,44885,50421,58186,60446,
#Partially deleted in new
chr3	138654067	138834917	chr3:138654067-138834917	0	-	138742747	138759343	789624	23	1459,133,146,124,168,79,110,179,100,144,122,189,51,131,97,252,78,171,180,198,226,187,223,	0,2074,3622,9838,10968,27899,29610,30557,34807,36932,40718,44839,50375,53091,58140,60400,79293,80566,83639,88490,101686,105105,180627,
#Partially deleted in new
chr3	138655087	138707621	chr3:138655087-138707621	0	-	138655087	138655087	8553170	13	439,133,146,124,168,79,110,179,100,144,122,189,463,	0,1054,2602,8818,9948,26879,28590,29537,33787,35912,39698,43819,52071,
#Partially deleted in new
chr3	138655149	138714715	chr3:138655149-138714715	0	-	138655388	138714715	789624	15	377,133,146,124,168,79,110,179,100,144,122,189,131,97,248,	0,992,2540,8756,9886,26817,28528,29475,33725,35850,39636,43757,52009,57058,59318,
#Partially deleted in new
chr3	138657282	138663933	chr3:138657282-138663933	0	-	138657282	138657282	8553170	2	553,28,	0,6623,
#Partially deleted in new
chr3	138681983	138712253	chr3:138681983-138712253	0	-	138683781	138712253	789624	8	62,110,100,144,122,189,131,46,	0,1694,6891,9016,12802,16923,25175,30224,
#Deleted in new
chr3	138683677	138685126	chr3:138683677-138685126	0	-	138683677	138683677	8553170	2	110,502,	0,947,
#Partially deleted in new
chr3	138714659	138742781	chr3:138714659-138742781	0	-	138714659	138742781	789624	4	60,78,180,224,	0,18701,23047,27898,
#Partially deleted in new
chr3	138755756	138834833	chr3:138755756-138834833	0	-	138755756	138759343	789624	5	223,187,67,105,139,	0,3416,14294,40706,78938,
#Partially deleted in new
chr3	138755848	138834938	chr3:138755848-138834938	0	-	138755848	138759343	789624	4	131,187,105,244,	0,3324,40614,78846,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	138759174	138770555	chr3:138759174-138770555	0	-	138759174	138759343	789624	2	185,505,	0,10876,
#Deleted in new
chr3	138777831	138778810	chr3:138777831-138778810	7	+	138777831	138777831	16724991	1	979,	0,
#Partially deleted in new
chr3	138796850	138797240	chr3:138796850-138797240	7	+	138796850	138796850	16724991	1	390,	0,
#Partially deleted in new
chr3	138825062	138826329	chr3:138825062-138826329	7	+	138825062	138825062	16724991	1	1267,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	138889254	138889957	chr3:138889254-138889957	7	-	138889254	138889254	16724991	2	158,252,	0,451,
#Deleted in new
chr3	138935188	138944020	chr3:138935188-138944020	3	-	138935188	138935188	789624	3	3248,235,55,	0,7195,8777,
#Deleted in new
chr3	138937907	138944003	chr3:138937907-138944003	0	-	138937907	138937907	8553170	3	529,298,38,	0,4413,6058,
#Deleted in new
chr3	138940427	138942578	chr3:138940427-138942578	0	-	138940427	138940427	8553170	2	288,195,	0,1956,
#Deleted in new
chr3	138944223	138947140	chr3:138944223-138947140	3	-	138945591	138946722	789624	1	2917,	0,
#Deleted in new
chr3	138944223	138947137	chr3:138944223-138947137	1	-	138945591	138946722	789624	1	2914,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	138947233	138953451	chr3:138947233-138953451	3	+	138947364	138950572	789624	3	231,120,3187,	0,2286,3031,
#Deleted in new
chr3	138947233	138950879	chr3:138947233-138950879	0	+	138947364	138949537	789624	3	231,128,615,	0,2278,3031,
#Deleted in new
chr3	138947611	138950828	chr3:138947611-138950828	0	+	138947611	138947611	8553170	2	396,1317,	0,1900,
#Deleted in new
chr3	139005467	139006268	chr3:139005467-139006268	3	-	139005467	139006268	789624	1	801,	0,
#Partially deleted in new
chr3	139005805	139357046	chr3:139005805-139357046	3	+	139344026	139357014	0	10	290,71,243,167,165,144,84,146,109,128,	0,174484,338150,341072,342354,344373,345171,346841,349876,351113,
#Deleted in new
chr3	139019030	139020926	chr3:139019030-139020926	3	-	139019863	139020661	789624	1	1896,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	139042101	139044892	chr3:139042101-139044892	3	-	139043831	139044620	789624	1	2791,	0,
#Deleted in new
chr3	139081653	139082377	chr3:139081653-139082377	7	-	139081653	139081653	16724991	1	724,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	139104184	139125171	chr3:139104184-139125171	3	+	139104184	139104184	789624	3	2237,94,1191,	0,5027,19796,
#Partially deleted in new
chr3	139110403	139346950	chr3:139110403-139346950	0	+	139163128	139346950	789624	4	172,106,181,73,	0,51917,52626,236474,
#Deleted in new
chr3	139232991	139233522	chr3:139232991-139233522	3	+	139232991	139232991	789624	1	531,	0,
#Deleted in new
chr3	139233413	139233520	chr3:139233413-139233520	3	+	139233413	139233413	8553170	1	107,	0,
#Partially deleted in new
chr3	139281713	139344023	chr3:139281713-139344023	0	+	139281713	139281713	8553170	3	122,366,68,	0,817,62242,
#Partially deleted in new
chr3	139344018	139357043	chr3:139344018-139357043	1	+	139344026	139357014	0	8	180,167,165,144,84,146,109,125,	0,2859,4141,6160,6958,8628,11663,12900,
#Partially deleted in new
chr3	139344021	139357223	chr3:139344021-139357223	0	+	139344026	139349333	0	9	177,164,165,107,144,84,146,109,305,	0,2859,4138,5306,6157,6955,8625,11660,12897,
#Partially deleted in new
chr3	139344026	139357033	chr3:139344026-139357033	1	+	139344026	139357014	789624	8	172,164,165,144,84,146,109,115,	0,2854,4133,6152,6950,8620,11655,12892,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	139344026	139357051	chr3:139344026-139357051	0	+	139344026	139344026	8553170	7	172,167,165,882,146,109,133,	0,2851,4133,6152,8620,11655,12892,
#Deleted in new
chr3	139344038	139350259	chr3:139344038-139350259	0	+	139344038	139350259	789624	4	160,194,165,81,	0,2812,4121,6140,
#Partially deleted in new
chr3	139344040	139351062	chr3:139344040-139351062	0	+	139344040	139349333	789624	6	158,167,165,107,144,86,	0,2837,4119,5287,6138,6936,
#Deleted in new
chr3	139344115	139348507	chr3:139344115-139348507	0	+	139344115	139344115	8553170	3	83,167,348,	0,2762,4044,
#Partially deleted in new
chr3	139344564	139357014	chr3:139344564-139357014	1	+	139344669	139357014	789624	8	154,167,165,144,84,146,109,96,	0,2313,3595,5614,6412,8082,11117,12354,
#Partially deleted in new
chr3	139346965	139351156	chr3:139346965-139351156	0	+	139346965	139346965	8553170	4	79,165,144,180,	0,1194,3213,4011,
#Partially deleted in new
chr3	139348281	139352792	chr3:139348281-139352792	0	+	139348281	139352792	789624	4	43,144,30,146,	0,1897,2749,4365,
#Deleted in new
chr3	139349023	139349371	chr3:139349023-139349371	3	-	139349023	139349023	8553170	1	348,	0,
#Deleted in new
chr3	139350869	139357046	chr3:139350869-139357046	0	+	139350869	139350869	8553170	3	1923,109,128,	0,4812,6049,
#Partially deleted in new
chr3	139355599	139359121	chr3:139355599-139359121	0	-	139355677	139359121	789624	4	168,72,69,124,	0,2600,3144,3398,
#Partially deleted in new
chr3	139357405	139389732	chr3:139357405-139389732	3	-	139357862	139389550	789624	22	553,72,69,181,93,215,111,208,131,144,107,89,111,200,143,100,147,149,127,87,138,185,	0,794,1338,1592,1864,3675,5001,9162,9609,10739,11855,12050,14317,15807,16260,17083,18062,20635,21641,21974,25892,32142,
#Partially deleted in new
chr3	139357592	139389676	chr3:139357592-139389676	1	-	139357862	139383351	789624	22	366,72,69,181,93,215,111,208,131,144,107,89,111,200,143,100,147,149,127,87,138,46,	0,607,1151,1405,1677,3488,4814,8975,9422,10552,11668,11863,14130,15620,16073,16896,17875,20448,21454,21787,25705,32038,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	139357822	139358743	chr3:139357822-139358743	0	-	139357822	139357822	8553170	2	136,544,	0,377,
#Partially deleted in new
chr3	139357831	139371796	chr3:139357831-139371796	0	-	139357862	139371796	789624	6	105,46,144,107,89,74,	0,9268,10313,11429,11624,13891,
#Partially deleted in new
chr3	139374239	139389587	chr3:139374239-139389587	0	-	139374239	139374239	8553170	7	349,147,149,127,87,138,40,	0,1228,3801,4807,5140,9058,15308,
#Partially deleted in new
chr3	139375597	139389640	chr3:139375597-139389640	0	-	139375597	139389550	789624	6	17,86,127,87,138,93,	0,2443,3449,3782,7700,13950,
#Partially deleted in new
chr3	139378124	139389680	chr3:139378124-139389680	0	-	139378124	139383351	789624	5	65,127,87,138,212,	0,922,1255,5173,11344,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	139379046	139389648	chr3:139379046-139389648	0	-	139379046	139383351	789624	5	127,87,138,197,180,	0,333,4251,5957,10422,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	139379055	139389626	chr3:139379055-139389626	0	-	139379055	139383351	789624	5	118,87,138,426,79,	0,324,4242,5948,10492,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	139379075	139389560	chr3:139379075-139389560	0	-	139379075	139379075	8553170	6	98,87,136,138,197,13,	0,304,696,4222,5928,10472,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	139379083	139389670	chr3:139379083-139389670	0	-	139379083	139383351	789624	5	90,87,138,197,123,	0,296,4214,5920,10464,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	139380010	139389646	chr3:139380010-139389646	0	-	139380010	139380010	8553170	2	3425,99,	0,9537,
#Partially deleted in new
chr3	139389814	139444363	chr3:139389814-139444363	1	+	139389814	139389814	8553170	3	433,99,70,	0,33201,54479,
#Partially deleted in new
chr3	139389817	139444325	chr3:139389817-139444325	0	+	139389817	139389817	8553170	3	420,99,32,	0,33198,54476,
#Partially deleted in new
chr3	139389829	139423393	chr3:139389829-139423393	0	+	139389829	139389829	8553170	2	104,378,	0,33186,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	139389837	139452240	chr3:139389837-139452240	1	+	139389837	139389837	8553170	4	96,99,134,240,	0,33178,60442,62163,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	139389839	139583319	chr3:139389839-139583319	3	+	139389839	139389839	789624	5	94,124,99,59,191,	0,29717,33176,187952,193289,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	139389875	139423049	chr3:139389875-139423049	1	+	139389875	139389875	8553170	2	554,34,	0,33140,
#Partially deleted in new
chr3	139452883	139476516	chr3:139452883-139476516	3	-	139453115	139476459	0	4	283,102,179,130,	0,1845,9228,23503,
#Partially deleted in new
chr3	139454771	139480723	chr3:139454771-139480723	0	-	139454771	139476459	789624	5	59,179,124,95,32,	0,7340,21615,25726,25920,
#Deleted in new
chr3	139466429	139466795	chr3:139466429-139466795	3	+	139466429	139466429	8553170	2	50,223,	0,143,
#Deleted in new
chr3	139476386	139480747	chr3:139476386-139480747	0	-	139476386	139476459	789624	2	124,56,	0,4305,
#Deleted in new
chr3	139493808	139494937	chr3:139493808-139494937	7	+	139493808	139493808	16724991	1	1129,	0,
#Partially deleted in new
chr3	139517433	139539829	chr3:139517433-139539829	3	-	139517626	139539718	789624	4	247,102,179,370,	0,987,21347,22026,
#Deleted in new
chr3	139517433	139518635	chr3:139517433-139518635	0	-	139517433	139517433	8553170	2	247,215,	0,987,
#Partially deleted in new
chr3	139517573	139539587	chr3:139517573-139539587	1	-	139517626	139539532	0	4	107,102,179,128,	0,847,21207,21886,
#Partially deleted in new
chr3	139524406	139539719	chr3:139524406-139539719	1	-	139525878	139539532	789624	3	1496,179,260,	0,14374,15053,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	139525698	139539688	chr3:139525698-139539688	0	-	139538735	139539532	789624	3	204,639,229,	0,12622,13761,
#Partially deleted in new
chr3	139525784	139539829	chr3:139525784-139539829	1	-	139525878	139539718	0	3	118,179,370,	0,12996,13675,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	139526404	139539829	chr3:139526404-139539829	1	-	139527306	139539718	0	3	938,179,370,	0,12376,13055,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	139539915	139583254	chr3:139539915-139583254	0	+	139539915	139539915	8553170	3	309,59,126,	0,37876,43213,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	139560179	139678017	chr3:139560179-139678017	0	-	139575990	139627724	789624	7	1213,83,412,184,149,100,313,	0,13418,15403,18692,67436,77783,117525,
#Partially deleted in new
chr3	139560190	139677998	chr3:139560190-139677998	1	-	139561009	139579053	0	5	1202,83,184,100,294,	0,13407,18681,77772,117514,
#Partially deleted in new
chr3	139560191	139677965	chr3:139560191-139677965	1	-	139561009	139627724	0	4	1201,149,100,261,	0,67424,77771,117513,
#Partially deleted in new
chr3	139560215	139677850	chr3:139560215-139677850	1	-	139561382	139627724	789624	5	1177,184,282,149,146,	0,18656,22711,67400,117489,
#Partially deleted in new
chr3	139560215	139678016	chr3:139560215-139678016	1	-	139561009	139627724	789624	7	1177,83,184,282,149,100,312,	0,13382,18656,22711,67400,77747,117489,
#Partially deleted in new
chr3	139560215	139678017	chr3:139560215-139678017	3	-	139561009	139627724	789624	8	1177,83,184,282,149,37,100,313,	0,13382,18656,22711,67400,74395,77747,117489,
#Partially deleted in new
chr3	139560222	139678017	chr3:139560222-139678017	1	-	139561382	139627724	789624	7	1170,127,83,184,149,100,313,	0,11884,13375,18649,67393,77740,117482,
#Partially deleted in new
chr3	139560581	139677946	chr3:139560581-139677946	1	-	139561009	139627724	0	6	811,83,184,149,100,242,	0,13016,18290,67034,77381,117123,
#Partially deleted in new
chr3	139560841	139677742	chr3:139560841-139677742	1	-	139561382	139579053	789624	4	551,184,100,38,	0,18030,77121,116863,
#Partially deleted in new
chr3	139561086	139583077	chr3:139561086-139583077	0	-	139561086	139561086	8553170	4	306,83,184,151,	0,12511,17785,21840,
#Partially deleted in new
chr3	139561150	139575648	chr3:139561150-139575648	0	-	139561150	139561150	8553170	4	242,127,83,66,	0,10956,12447,14432,
#Partially deleted in new
chr3	139561332	139678005	chr3:139561332-139678005	1	-	139561382	139627724	789624	5	60,184,149,100,301,	0,17539,66283,76630,116372,
#Partially deleted in new
chr3	139573632	139677952	chr3:139573632-139677952	0	-	139573632	139627724	789624	6	48,184,146,37,100,248,	0,5239,53983,60978,64330,104072,
#Deleted in new
chr3	139582927	139583593	chr3:139582927-139583593	7	-	139582927	139582927	16724991	1	666,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	139584104	139584445	chr3:139584104-139584445	3	-	139584104	139584104	8553170	1	341,	0,
#Partially deleted in new
chr3	139599147	139677718	chr3:139599147-139677718	1	-	139599280	139627724	789624	4	321,149,100,14,	0,28468,38815,78557,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	139609668	139609939	chr3:139609668-139609939	3	-	139609668	139609668	8553170	1	271,	0,
#Partially deleted in new
chr3	139634359	139677736	chr3:139634359-139677736	0	-	139634359	139634359	8553170	3	228,100,32,	0,3603,43345,
#Partially deleted in new
chr3	139634359	139677918	chr3:139634359-139677918	0	-	139634359	139634359	8553170	4	225,100,110,214,	0,3603,38243,43345,
#Partially deleted in new
chr3	139634359	139677828	chr3:139634359-139677828	0	-	139634359	139634359	8553170	3	225,100,124,	0,3603,43345,
#Partially deleted in new
chr3	139634359	139678004	chr3:139634359-139678004	0	-	139634359	139634359	8553170	3	288,100,300,	0,3603,43345,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	139634388	139677972	chr3:139634388-139677972	0	-	139634388	139634388	8553170	2	3674,268,	0,43316,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	139678619	139682564	chr3:139678619-139682564	3	-	139678619	139678619	8553170	1	3945,	0,
#Deleted in new
chr3	139688402	139689342	chr3:139688402-139689342	3	-	139688402	139688402	8553170	2	396,211,	0,729,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	139837219	139859894	chr3:139837219-139859894	3	+	139837219	139837219	8553170	3	141,126,272,	0,1106,22403,
#Deleted in new
chr3	139845077	139845411	chr3:139845077-139845411	7	-	139845077	139845077	16724991	1	334,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	139935184	140577397	chr3:139935184-140577397	3	+	139935374	140566253	789624	17	299,123,196,209,150,186,249,122,163,167,149,218,171,146,124,185,11345,	0,240766,468444,469373,485940,513334,524336,531425,597139,611330,621328,623455,626953,627626,627895,628776,630868,
#Partially deleted in new
chr3	139935186	140557055	chr3:139935186-140557055	0	+	139935186	139935186	8553170	11	297,123,196,209,150,186,249,122,163,167,543,	0,240764,468442,469371,485938,513332,524334,531423,597137,611328,621326,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	140452527	140460351	chr3:140452527-140460351	0	-	140452527	140452527	8553170	4	138,143,97,100,	0,1748,2129,7724,
#Deleted in new
chr3	140460999	140462825	chr3:140460999-140462825	3	-	140460999	140460999	8553170	2	378,104,	0,1722,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	140505610	140508789	chr3:140505610-140508789	3	-	140505610	140505610	789624	2	555,2138,	0,1041,
#Deleted in new
chr3	140619693	140619837	chr3:140619693-140619837	7	-	140619693	140619693	16724991	1	144,	0,
#Partially deleted in new
chr3	140678038	140701150	chr3:140678038-140701150	3	+	140678229	140700974	789624	5	532,698,821,225,263,	0,4423,9683,12929,22849,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	140865074	140867783	chr3:140865074-140867783	3	-	140865074	140865074	8553170	1	2709,	0,
#Deleted in new
chr3	140902193	140902651	chr3:140902193-140902651	7	+	140902193	140902193	16724991	1	458,	0,
#Partially deleted in new
chr3	140941829	140979933	chr3:140941829-140979933	3	+	140942054	140976453	789624	7	266,165,78,101,67,290,3671,	0,14697,17633,21297,29097,31886,34433,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	140941840	140980961	chr3:140941840-140980961	0	+	140942054	140966968	8553170	9	255,165,78,101,103,48,67,290,4702,	0,14686,17622,21286,25093,26842,29086,31875,34419,
#Partially deleted in new
chr3	140941842	140957069	chr3:140941842-140957069	0	+	140941842	140941842	8553170	2	253,543,	0,14684,
#Partially deleted in new
chr3	140941852	140967005	chr3:140941852-140967005	0	+	140941852	140941852	8553170	5	243,165,78,101,72,	0,14674,17610,21274,25081,
#Partially deleted in new
chr3	140941867	140963471	chr3:140941867-140963471	0	+	140941867	140941867	8553170	3	228,165,345,	0,14659,21259,
#Partially deleted in new
chr3	140941886	140976650	chr3:140941886-140976650	1	+	140942054	140976453	789624	7	209,165,78,101,67,290,391,	0,14640,17576,21240,29040,31829,34373,
#Partially deleted in new
chr3	140941886	140966211	chr3:140941886-140966211	1	+	140942054	140963241	789624	4	209,165,78,3085,	0,14640,17576,21240,
#Partially deleted in new
chr3	140941894	140976483	chr3:140941894-140976483	0	+	140942054	140967013	789624	8	201,165,78,101,37,67,290,224,	0,14632,17568,21232,25105,29032,31821,34365,
#Partially deleted in new
chr3	140941900	140976481	chr3:140941900-140976481	1	+	140942054	140976453	789624	6	195,165,101,67,290,222,	0,14626,21226,29026,31815,34359,
#Partially deleted in new
chr3	140941993	140973737	chr3:140941993-140973737	0	+	140942054	140967013	789624	8	102,165,78,101,37,48,67,22,	0,14533,17469,21133,25006,26689,28933,31722,
#Partially deleted in new
chr3	140942461	140970970	chr3:140942461-140970970	0	+	140956635	140970970	789624	4	268,165,101,44,	0,14065,20665,28465,
#Partially deleted in new
chr3	140956524	140976286	chr3:140956524-140976286	0	+	140956635	140966373	789624	7	167,78,101,87,67,290,27,	0,2938,6602,9823,14402,17191,19735,
#Partially deleted in new
chr3	140956626	140976282	chr3:140956626-140976282	0	+	140956635	140966968	789624	7	65,78,101,103,67,290,23,	0,2836,6500,10307,14300,17089,19633,
#Partially deleted in new
chr3	140966779	140973989	chr3:140966779-140973989	0	+	140966779	140966779	8553170	3	257,67,274,	0,4147,6936,
#Partially deleted in new
chr3	140970364	140976647	chr3:140970364-140976647	0	+	140970364	140970364	8553170	3	629,290,388,	0,3351,5895,
#Deleted in new
chr3	140972743	140973255	chr3:140972743-140973255	3	+	140972743	140972743	8553170	2	171,222,	0,290,
#Partially deleted in new
chr3	140973665	140976463	chr3:140973665-140976463	0	+	140973665	140973665	8553170	2	340,204,	0,2594,
#Partially deleted in new
chr3	141051401	141148611	chr3:141051401-141148611	3	+	141066104	141147269	0	3	591,847,1470,	0,14550,95740,
#Partially deleted in new
chr3	141076959	141080373	chr3:141076959-141080373	0	+	141076959	141076959	8553170	2	453,84,	0,3330,
#Partially deleted in new
chr3	141077445	141147460	chr3:141077445-141147460	0	+	141077445	141077445	8553170	3	138,119,319,	0,2844,69696,
#Partially deleted in new
chr3	141115123	141124182	chr3:141115123-141124182	3	-	141115123	141115123	8553170	3	213,72,107,	0,1942,8952,
#Partially deleted in new
chr3	141228725	141287385	chr3:141228725-141287385	0	+	141260175	141287385	789624	5	78,132,159,127,72,	0,31397,49616,50652,58588,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	141231783	141321722	chr3:141231783-141321722	0	+	141260175	141305799	789624	9	128,132,159,127,140,2021,204,120,711,	0,28339,46558,47594,55530,73972,76420,79853,89228,
#Partially deleted in new
chr3	141231824	141292537	chr3:141231824-141292537	0	+	141260175	141287315	789624	4	87,132,140,270,	0,28298,55489,60443,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	141231827	141294906	chr3:141231827-141294906	3	+	141260175	141293205	789624	6	84,132,159,127,140,2639,	0,28295,46514,47550,55486,60440,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	141231828	141317922	chr3:141231828-141317922	0	+	141260175	141305799	789624	9	83,132,159,127,140,2021,204,120,1668,	0,28294,46513,47549,55485,73927,76375,79808,84426,
#Partially deleted in new
chr3	141231839	141293605	chr3:141231839-141293605	1	+	141278376	141293205	789624	7	72,132,98,159,127,140,1338,	0,28283,30403,46502,47538,55474,60428,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	141231860	141294644	chr3:141231860-141294644	1	+	141260175	141293205	789624	8	51,103,71,132,159,127,140,2377,	0,2355,3025,28262,46481,47517,55453,60407,
#Partially deleted in new
chr3	141231866	141235421	chr3:141231866-141235421	0	+	141231866	141231866	8553170	3	45,103,536,	0,2349,3019,
#Partially deleted in new
chr3	141231875	141279425	chr3:141231875-141279425	0	+	141260175	141279425	789624	5	36,103,132,159,48,	0,2340,28247,46466,47502,
#Partially deleted in new
chr3	141231878	141279475	chr3:141231878-141279475	0	+	141260175	141262244	789624	8	33,103,103,71,132,98,159,98,	0,454,2337,3007,28244,30364,46463,47499,
#Partially deleted in new
chr3	141231881	141236389	chr3:141231881-141236389	0	+	141231881	141231881	8553170	5	30,103,71,157,118,	0,2334,3004,3516,4390,
#Partially deleted in new
chr3	141231913	141262625	chr3:141231913-141262625	0	+	141231913	141231913	8553170	3	67,132,383,	0,28209,30329,
#Deleted in new
chr3	141258417	141258779	chr3:141258417-141258779	7	+	141258417	141258417	16724991	1	362,	0,
#Partially deleted in new
chr3	141260122	141367753	chr3:141260122-141367753	0	+	141260175	141308238	789624	7	132,159,127,140,204,120,1508,	0,18219,19255,27191,48081,51514,106123,
#Partially deleted in new
chr3	141262005	141287454	chr3:141262005-141287454	0	+	141278376	141287454	789624	5	44,98,159,127,141,	0,237,16336,17372,25308,
#Partially deleted in new
chr3	141262613	141293504	chr3:141262613-141293504	1	+	141262695	141293205	789624	5	110,159,127,140,1237,	0,15728,16764,24700,29654,
#Partially deleted in new
chr3	141267352	141367137	chr3:141267352-141367137	3	-	141267352	141267352	8553170	3	256,72,94,	0,98948,99691,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	141272664	141294040	chr3:141272664-141294040	1	+	141274571	141293205	789624	5	1959,159,127,140,1773,	0,5677,6713,14649,19603,
#Partially deleted in new
chr3	141287358	141292316	chr3:141287358-141292316	0	+	141287358	141287358	8553170	3	95,145,49,	0,4229,4909,
#Deleted in new
chr3	141307611	141307933	chr3:141307611-141307933	7	-	141307611	141307611	16724991	1	322,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	141368303	141394457	chr3:141368303-141394457	0	+	141368303	141368303	8553170	5	501,75,63,66,258,	0,1568,13121,18568,25896,
#Partially deleted in new
chr3	141368323	141405756	chr3:141368323-141405756	0	+	141368323	141368323	8553170	6	481,75,63,66,105,31,	0,1548,13101,18548,35603,37402,
#Partially deleted in new
chr3	141368443	141390034	chr3:141368443-141390034	0	+	141368443	141368443	8553170	6	361,75,63,50,66,2594,	0,1428,12981,15216,18428,18997,
#Partially deleted in new
chr3	141368489	141389837	chr3:141368489-141389837	0	+	141368489	141368489	8553170	4	315,75,63,2966,	0,1382,12935,18382,
#Partially deleted in new
chr3	141384809	141442744	chr3:141384809-141442744	0	+	141442388	141442744	789624	4	66,66,105,356,	0,2062,19117,57579,
#Deleted in new
chr3	141386441	141387578	chr3:141386441-141387578	0	+	141386441	141386441	8553170	2	314,707,	0,430,
#Partially deleted in new
chr3	141386445	141404006	chr3:141386445-141404006	0	+	141386445	141386445	8553170	2	492,80,	0,17481,
#Partially deleted in new
chr3	141386451	141442491	chr3:141386451-141442491	0	+	141442388	141442491	789624	4	304,66,105,103,	0,420,17475,55937,
#Partially deleted in new
chr3	141386878	141404016	chr3:141386878-141404016	0	+	141386878	141386878	8553170	3	59,447,90,	0,562,17048,
#Partially deleted in new
chr3	141387646	141444701	chr3:141387646-141444701	0	+	141442388	141444701	789624	3	241,105,2313,	0,16280,54742,
#Partially deleted in new
chr3	141392718	141448187	chr3:141392718-141448187	1	+	141442388	141445976	789624	3	152,105,5799,	0,11208,49670,
#Partially deleted in new
chr3	141402348	141442826	chr3:141402348-141442826	0	+	141442388	141442826	789624	3	101,105,438,	0,1578,40040,
#Partially deleted in new
chr3	141402817	141442597	chr3:141402817-141442597	0	+	141442388	141442597	789624	3	335,105,209,	0,1109,39571,
#Partially deleted in new
chr3	141426115	141446000	chr3:141426115-141446000	1	+	141442388	141445976	789624	2	50,3612,	0,16273,
#Partially deleted in new
chr3	141426126	141443020	chr3:141426126-141443020	0	+	141442388	141443020	789624	3	39,188,632,	0,1507,16262,
#Partially deleted in new
chr3	141431722	141442722	chr3:141431722-141442722	0	+	141442388	141442722	789624	2	521,334,	0,10666,
#Deleted in new
chr3	141442388	141445976	chr3:141442388-141445976	1	+	141442388	141445976	789624	1	3588,	0,
#Deleted in new
chr3	141446893	141447812	chr3:141446893-141447812	0	+	141446893	141446893	8553170	2	156,177,	0,742,
#Partially deleted in new
chr3	141470633	141471902	chr3:141470633-141471902	7	-	141470633	141470633	16724991	1	1269,	0,
#Partially deleted in new
chr3	141487046	141540573	chr3:141487046-141540573	0	+	141487083	141512207	789624	5	136,118,104,95,41,	0,25116,29281,42661,53486,
#Partially deleted in new
chr3	141487048	141615342	chr3:141487048-141615342	3	+	141487083	141612313	789624	24	168,118,104,95,77,84,73,77,102,157,149,115,75,124,107,84,78,74,107,83,209,104,190,3060,	0,25114,29279,42659,53484,66808,68791,71837,72845,83863,84357,85560,86098,86895,89951,93319,94051,98976,99597,120629,121440,122371,122828,125234,
#Partially deleted in new
chr3	141487083	141612313	chr3:141487083-141612313	1	+	141487083	141612313	789624	25	133,118,104,95,77,84,73,77,102,157,149,115,75,124,107,84,78,74,107,8,87,209,104,190,31,	0,25079,29244,42624,53449,66773,68756,71802,72810,83828,84322,85525,86063,86860,89916,93284,94016,98941,99562,120580,120590,121405,122336,122793,125199,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	141525132	141526121	chr3:141525132-141526121	3	+	141525132	141525132	8553170	2	224,388,	0,601,
#Partially deleted in new
chr3	141578523	141580445	chr3:141578523-141580445	0	+	141578523	141578523	8553170	3	231,53,78,	0,913,1844,
#Partially deleted in new
chr3	141578712	141609974	chr3:141578712-141609974	0	+	141578712	141578712	8553170	9	42,84,78,74,107,83,209,104,98,	0,1655,2387,7312,7933,28965,29776,30707,31164,
#Partially deleted in new
chr3	141578736	141608541	chr3:141578736-141608541	0	+	141578736	141578736	8553170	7	84,84,78,74,107,83,53,	0,1631,2363,7288,7909,28941,29752,
#Partially deleted in new
chr3	141586698	141609523	chr3:141586698-141609523	0	+	141586698	141586698	8553170	5	57,12,83,209,104,	0,3431,20979,21790,22721,
#Deleted in new
chr3	141600275	141600579	chr3:141600275-141600579	7	-	141600275	141600275	16724991	1	304,	0,
#Partially deleted in new
chr3	141660535	141729387	chr3:141660535-141729387	7	+	141660535	141660535	16724991	10	55,229,153,149,141,146,96,136,107,97,	0,2507,6244,20949,24523,25336,29896,52756,60456,68755,
#Partially deleted in new
chr3	141663091	141729405	chr3:141663091-141729405	5	+	141663091	141663091	16724991	9	180,153,149,141,146,96,136,107,115,	0,3688,18393,21967,22780,27340,50200,57900,66199,
#Partially deleted in new
chr3	141709015	141709832	chr3:141709015-141709832	7	-	141709015	141709015	16724991	2	242,270,	0,547,
#Deleted in new
chr3	141724424	141724526	chr3:141724424-141724526	7	+	141724424	141724424	16724991	1	102,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	141738203	141747560	chr3:141738203-141747560	3	+	141738341	141745277	0	3	313,48,2402,	0,5305,6955,
#Partially deleted in new
chr3	141738248	141743027	chr3:141738248-141743027	0	+	141738248	141738248	8553170	2	268,384,	0,4395,
#Partially deleted in new
chr3	141738276	141745700	chr3:141738276-141745700	1	+	141738341	141745277	0	2	240,542,	0,6882,
#Partially deleted in new
chr3	141738296	141745702	chr3:141738296-141745702	1	+	141738341	141745215	0	3	213,48,544,	0,5212,6862,
#Partially deleted in new
chr3	141738303	141745669	chr3:141738303-141745669	0	+	141738341	141742795	0	4	213,264,48,511,	0,4340,5205,6855,
#Partially deleted in new
chr3	141738318	141745517	chr3:141738318-141745517	0	+	141738341	141742682	789624	4	191,264,48,359,	0,4325,5190,6840,
#Partially deleted in new
chr3	141738473	141807919	chr3:141738473-141807919	3	+	141738473	141780420	8553170	3	43,438,275,	0,41900,69171,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	141745841	141746394	chr3:141745841-141746394	0	+	141745841	141745841	8553170	2	278,140,	0,413,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	141778147	141818490	chr3:141778147-141818490	3	+	141778284	141817050	789624	4	749,438,275,1777,	0,2226,29497,38566,
#Partially deleted in new
chr3	141865011	141865279	chr3:141865011-141865279	7	-	141865011	141865011	16724991	1	268,	0,
#Partially deleted in new
chr3	141876123	141916010	chr3:141876123-141916010	0	+	141903681	141916010	789624	5	271,129,108,185,41,	0,27496,31043,37528,39846,
#Partially deleted in new
chr3	141876613	141926484	chr3:141876613-141926484	3	+	141876801	141925701	789624	7	297,129,108,185,51,87,954,	0,27006,30553,37038,39356,45363,48917,
#Partially deleted in new
chr3	141876615	141926514	chr3:141876615-141926514	0	+	141876801	141902161	789624	9	295,92,129,108,185,51,20,87,984,	0,25520,27004,30551,37036,39354,39939,45361,48915,
#Partially deleted in new
chr3	141876805	141926481	chr3:141876805-141926481	0	+	141876805	141902161	789624	8	105,92,129,108,185,51,87,951,	0,25330,26814,30361,36846,39164,45171,48725,
#Partially deleted in new
chr3	141876854	141926182	chr3:141876854-141926182	1	+	141903649	141925701	789624	3	56,129,652,	0,26765,48676,
#Partially deleted in new
chr3	141877528	141913706	chr3:141877528-141913706	0	+	141902160	141913706	789624	5	34,92,129,108,55,	0,24607,26091,29638,36123,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	141902923	141903030	chr3:141902923-141903030	3	-	141902923	141902923	8553170	1	107,	0,
#Partially deleted in new
chr3	141903727	141922180	chr3:141903727-141922180	0	+	141903727	141903727	8553170	5	21,108,185,51,204,	0,3439,9924,12242,18249,
#Partially deleted in new
chr3	141915969	141925728	chr3:141915969-141925728	0	+	141915969	141916408	789624	5	51,65,20,87,198,	0,406,585,6007,9561,
#Partially deleted in new
chr3	141918251	141919021	chr3:141918251-141919021	3	-	141918251	141918251	8553170	2	90,286,	0,484,
#Partially deleted in new
chr3	141921533	141925985	chr3:141921533-141925985	0	+	141921533	141921533	8553170	3	115,87,455,	0,443,3997,
#Partially deleted in new
chr3	141921947	141925643	chr3:141921947-141925643	0	+	141921947	141921947	8553170	2	116,113,	0,3583,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	141936706	141938547	chr3:141936706-141938547	3	-	141936706	141936706	8553170	1	1841,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr3	141944427	142149521	chr3:141944427-142149521	1	-	141952512	142101749	0	13	8269,106,167,152,69,144,163,48,122,104,67,107,339,	0,8483,15246,19384,25645,29620,34092,49110,50592,61013,148633,157307,204755,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	141944434	142000353	chr3:141944434-142000353	1	-	141952512	142000353	0	10	8262,106,167,152,69,144,163,48,122,102,	0,8476,15239,19377,25638,29613,34085,49103,50585,55817,
#Partially deleted in new
chr3	141951501	142028665	chr3:141951501-142028665	1	-	141952512	142005443	0	11	1195,106,167,152,69,147,163,48,122,104,87,	0,1409,8172,12310,18571,22546,27018,42036,43518,53939,77077,
#Partially deleted in new
chr3	141952142	142028626	chr3:141952142-142028626	1	-	141952512	141978630	0	8	554,106,167,152,69,144,163,48,	0,768,7531,11669,17930,21905,26377,76436,
#Partially deleted in new
chr3	141952275	142028646	chr3:141952275-142028646	1	-	141952512	142005457	0	10	421,106,167,152,69,144,163,48,104,68,	0,635,7398,11536,17797,21772,26244,41262,53165,76303,
#Partially deleted in new
chr3	141952495	142005469	chr3:141952495-142005469	1	-	141952512	142005443	0	10	201,106,167,152,69,144,163,48,122,29,	0,415,7178,11316,17577,21552,26024,41042,42524,52945,
#Partially deleted in new
chr3	141952828	141963835	chr3:141952828-141963835	0	-	141952864	141963835	789624	3	188,167,24,	0,6845,10983,
#Partially deleted in new
chr3	141959799	142028597	chr3:141959799-142028597	0	-	141959799	142005443	789624	9	41,152,69,147,163,48,122,104,19,	0,4012,10273,14248,18720,33738,35220,45641,68779,
#Partially deleted in new
chr3	141963819	142028631	chr3:141963819-142028631	0	-	141963819	141995066	789624	7	144,69,147,163,48,122,53,	0,6253,10228,14700,29718,31200,64759,
#Partially deleted in new
chr3	141963851	142029157	chr3:141963851-142029157	0	-	141963851	142005443	789624	8	112,69,144,163,48,122,104,116,	0,6221,10196,14668,29686,31168,41589,65190,
#Partially deleted in new
chr3	141974066	141995229	chr3:141974066-141995229	0	-	141974066	141974066	8553170	4	125,163,48,210,	0,4453,19471,20953,
#Partially deleted in new
chr3	141974104	141978688	chr3:141974104-141978688	0	-	141974104	141974104	8553170	2	87,169,	0,4415,
#Partially deleted in new
chr3	141989066	141993585	chr3:141989066-141993585	0	-	141989360	141993585	789624	2	448,48,	0,4471,
#Partially deleted in new
chr3	141993572	142149521	chr3:141993572-142149521	0	-	141993572	142005443	789624	4	13,122,104,339,	0,1447,11868,155610,
#Partially deleted in new
chr3	141994269	142028606	chr3:141994269-142028606	0	-	141994269	141994269	8553170	3	872,104,28,	0,11171,34309,
#Partially deleted in new
chr3	141995062	142149470	chr3:141995062-142149470	0	-	141995062	142005443	789624	4	79,104,107,288,	0,10378,106672,154120,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	141995070	142126370	chr3:141995070-142126370	0	-	141995070	142101749	789624	5	71,104,67,107,222,	0,10370,97990,106664,131078,
#Partially deleted in new
chr3	141995095	142149537	chr3:141995095-142149537	0	-	141995095	141995095	8553170	4	46,67,107,355,	0,97965,106639,154087,
#Deleted in new
chr3	142043622	142044198	chr3:142043622-142044198	7	-	142043622	142043622	16724991	1	576,	0,
#Partially deleted in new
chr3	142093030	142149544	chr3:142093030-142149544	0	-	142093030	142093030	8553170	3	97,107,362,	0,8704,56152,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	142145453	142145555	chr3:142145453-142145555	3	+	142145453	142145453	8553170	1	102,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	142157526	142225607	chr3:142157526-142225607	3	-	142165621	142225455	789624	16	8244,134,60,104,95,105,127,61,74,62,76,132,94,76,94,299,	0,12798,13892,14826,19955,23934,25396,28402,28667,28925,30177,41275,47168,55999,58072,67782,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr3	142163571	142225567	chr3:142163571-142225567	0	-	142185703	142225455	789624	18	251,133,134,60,104,124,105,127,1083,61,74,62,76,132,94,76,94,259,	0,2066,6753,7847,8781,13910,17889,19351,21139,22357,22622,22880,24132,35230,41123,49954,52027,61737,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	142163908	142225548	chr3:142163908-142225548	0	-	142185703	142225455	789624	17	1862,134,60,104,95,105,127,1083,61,74,62,76,132,94,76,94,240,	0,6416,7510,8444,13573,17552,19014,20802,22020,22285,22543,23795,34893,40786,49617,51690,61400,
#Partially deleted in new
chr3	142163918	142183066	chr3:142163918-142183066	0	-	142163918	142163918	8553170	7	1852,134,60,104,95,105,144,	0,6406,7500,8434,13563,17542,19004,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	142165698	142177509	chr3:142165698-142177509	0	-	142173173	142177509	789624	6	72,134,60,104,122,28,	0,4626,5720,6654,7377,11783,
#Partially deleted in new
chr3	142170182	142181470	chr3:142170182-142181470	0	-	142170208	142181470	789624	5	276,60,104,95,10,	0,1236,2170,7299,11278,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	142181461	142183488	chr3:142181461-142183488	0	-	142181461	142181461	8553170	2	104,566,	0,1461,
#Partially deleted in new
chr3	142186165	142225416	chr3:142186165-142225416	0	-	142186165	142186165	8553170	8	102,62,76,132,94,76,94,108,	0,286,1538,12636,18529,27360,29433,39143,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	142198856	142225592	chr3:142198856-142225592	0	-	142204643	142225455	789624	5	77,572,76,94,284,	0,5360,14669,16742,26452,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	142204272	142225515	chr3:142204272-142225515	0	-	142204272	142204272	8553170	5	330,94,76,94,207,	0,422,9253,11326,21036,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	142204296	142225575	chr3:142204296-142225575	0	-	142204296	142204296	8553170	5	15,94,76,94,267,	0,398,9229,11302,21012,
#Partially deleted in new
chr3	142204674	142225592	chr3:142204674-142225592	0	-	142204674	142204674	8553170	4	114,76,94,284,	0,8851,10924,20634,
#Boundary problem: need 42, got 0, diff 42, mapped 0.0
chr3	142306606	142448062	chr3:142306606-142448062	3	-	142311510	142447944	789624	42	5207,161,39,103,114,182,157,123,62,109,96,208,70,133,57,136,90,147,116,99,114,163,132,104,99,121,170,120,157,90,106,67,138,68,169,88,83,111,110,98,233,193,	0,5991,6529,11985,12183,22827,25768,26360,28841,40627,48794,50305,53255,58440,58703,63878,64632,69191,69872,73475,76693,77916,90722,93837,97067,97262,98300,105937,107528,110533,111897,112208,114409,114869,115975,116228,116953,118615,118822,120137,126054,141263,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr3	142309391	142412655	chr3:142309391-142412655	0	-	142311510	142412655	789624	27	2422,161,103,114,182,160,123,62,109,96,208,70,133,57,136,90,147,116,99,114,163,132,104,99,121,167,112,	0,3206,9200,9398,20042,22983,23575,26056,37842,46009,47520,50470,55655,55918,61093,61847,66406,67087,70690,73908,75131,87937,91052,94282,94477,95515,103152,
#Partially deleted in new
chr3	142311260	142447992	chr3:142311260-142447992	1	-	142311510	142447944	789624	41	553,161,103,114,182,160,123,62,109,96,208,70,133,57,136,90,147,116,99,114,163,132,104,99,121,170,120,157,90,106,67,138,68,169,88,83,111,110,98,233,123,	0,1337,7331,7529,18173,21114,21706,24187,35973,44140,45651,48601,53786,54049,59224,59978,64537,65218,68821,72039,73262,86068,89183,92413,92608,93646,101283,102874,105879,107243,107554,109755,110215,111321,111574,112299,113961,114168,115483,121400,136609,
#Partially deleted in new
chr3	142318646	142335505	chr3:142318646-142335505	0	-	142332415	142335505	789624	5	48,114,50,123,58,	0,143,13728,14320,16801,
#Partially deleted in new
chr3	142329483	142332890	chr3:142329483-142332890	0	-	142329483	142329483	8553170	3	132,160,26,	0,2891,3381,
#Partially deleted in new
chr3	142355323	142370588	chr3:142355323-142370588	0	-	142355323	142355323	8553170	6	173,137,70,133,57,104,	0,1659,4538,9723,9986,15161,
#Partially deleted in new
chr3	142370484	142375991	chr3:142370484-142375991	0	-	142370484	142370484	8553170	3	136,90,194,	0,754,5313,
#Partially deleted in new
chr3	142376248	142425535	chr3:142376248-142425535	0	-	142376248	142376248	8553170	21	346,99,114,163,132,104,99,121,170,120,157,90,106,67,138,68,169,88,83,111,107,	0,3833,7051,8274,21080,24195,27425,27620,28658,36295,37886,40891,42255,42566,44767,45227,46333,46586,47311,48973,49180,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	142407656	142407737	chr3:142407656-142407737	3	-	142407656	142407656	8553170	1	81,	0,
#Partially deleted in new
chr3	142412547	142414340	chr3:142412547-142414340	0	-	142412547	142412547	8553170	2	116,206,	0,1587,
#Partially deleted in new
chr3	142417840	142448010	chr3:142417840-142448010	1	-	142418469	142447944	789624	12	769,67,138,68,169,88,83,111,110,98,233,141,	0,974,3175,3635,4741,4994,5719,7381,7588,8903,14820,30029,
#Partially deleted in new
chr3	142418418	142448012	chr3:142418418-142448012	0	-	142423626	142447944	789624	9	191,67,138,68,169,88,83,233,143,	0,396,2597,3057,4163,4416,5141,14242,29451,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	142420204	142420369	chr3:142420204-142420369	3	-	142420204	142420204	8553170	1	165,	0,
#Partially deleted in new
chr3	142422634	142429774	chr3:142422634-142429774	0	-	142422634	142425527	789624	7	116,88,83,111,110,98,80,	0,200,925,2587,2794,4109,7060,
#Partially deleted in new
chr3	142426563	142448027	chr3:142426563-142448027	0	-	142426563	142426563	8553170	3	278,233,158,	0,6097,21306,
#Partially deleted in new
chr3	142449234	142457710	chr3:142449234-142457710	0	-	142450572	142457710	789624	4	368,137,106,107,	0,1231,3893,8369,
#Partially deleted in new
chr3	142449236	142578826	chr3:142449236-142578826	3	-	142449428	142578704	0	47	366,106,152,154,157,151,144,210,135,233,98,143,180,160,180,178,92,92,165,179,211,138,121,116,114,207,126,94,144,131,93,186,195,171,172,101,191,263,193,153,191,192,179,878,141,92,181,	0,3891,8367,9721,9990,12703,15860,17087,18697,20100,20849,35903,43895,47124,47776,49360,50390,54125,55902,58694,63023,64264,66158,70432,73491,74756,85843,86871,89245,91667,93428,98488,100242,100895,103990,104403,104588,106640,107146,109387,110014,111026,112006,112995,116884,118826,129409,
#Partially deleted in new
chr3	142449236	142453166	chr3:142449236-142453166	0	-	142450532	142453166	789624	3	366,137,50,	0,1229,3880,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	142449237	142469427	chr3:142449237-142469427	0	-	142453055	142469427	789624	9	3996,152,154,157,151,144,210,135,91,	0,8366,9720,9989,12702,15859,17086,18696,20099,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	142450101	142452149	chr3:142450101-142452149	7	+	142450101	142450101	16724991	1	2048,	0,
#Partially deleted in new
chr3	142452752	142457803	chr3:142452752-142457803	0	-	142452752	142452752	8553170	2	481,200,	0,4851,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	142496389	142499192	chr3:142496389-142499192	0	-	142496389	142496389	8553170	4	131,180,178,63,	0,623,2207,2740,
#Partially deleted in new
chr3	142496396	142500102	chr3:142496396-142500102	0	-	142496396	142496396	8553170	4	124,59,178,476,	0,737,2200,3230,
#Partially deleted in new
chr3	142556069	142559001	chr3:142556069-142559001	0	-	142556069	142556069	8553170	3	70,193,378,	0,313,2554,
#Partially deleted in new
chr3	142556382	142562444	chr3:142556382-142562444	0	-	142556382	142562444	789624	5	193,153,191,179,213,	0,2241,2868,4860,5849,
#Partially deleted in new
chr3	142560338	142578724	chr3:142560338-142578724	0	-	142562337	142578704	789624	6	116,179,117,141,92,79,	0,904,1893,5782,7724,18307,
#Partially deleted in new
chr3	142580909	142582399	chr3:142580909-142582399	7	+	142580909	142580909	16724991	3	84,670,105,	0,395,1385,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	142591676	142591791	chr3:142591676-142591791	7	-	142591676	142591676	16724991	1	115,	0,
#Partially deleted in new
chr3	142596386	142713664	chr3:142596386-142713664	3	+	142664237	142712007	789624	16	123,106,164,130,133,82,166,143,93,196,79,115,134,124,125,1793,	0,67815,73003,74606,79770,81645,87619,87866,89897,93231,98082,101566,107481,108076,115114,115485,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	142596415	142669419	chr3:142596415-142669419	0	+	142664237	142669419	789624	5	94,93,285,106,30,	0,31400,48880,67786,72974,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	142596417	142671117	chr3:142596417-142671117	0	+	142664237	142671117	789624	5	92,93,106,164,125,	0,31398,67784,72972,74575,
#Partially deleted in new
chr3	142596431	142669494	chr3:142596431-142669494	0	+	142664237	142669494	789624	4	78,285,106,105,	0,48864,67770,72958,
#Partially deleted in new
chr3	142596437	142689672	chr3:142596437-142689672	0	+	142670995	142689672	789624	9	72,164,130,133,82,166,143,93,55,	0,72952,74555,79719,81594,87568,87815,89846,93180,
#Partially deleted in new
chr3	142596439	142669482	chr3:142596439-142669482	0	+	142664237	142669482	789624	5	70,112,186,106,93,	0,797,23013,67762,72950,
#Partially deleted in new
chr3	142596454	142671119	chr3:142596454-142671119	0	+	142664237	142671119	789624	5	55,112,106,164,127,	0,782,67747,72935,74538,
#Partially deleted in new
chr3	142623385	142713659	chr3:142623385-142713659	1	+	142664237	142712007	789624	16	177,106,164,130,133,82,166,143,93,196,79,115,134,124,125,1788,	0,40816,46004,47607,52771,54646,60620,60867,62898,66232,71083,74567,80482,81077,88115,88486,
#Partially deleted in new
chr3	142623406	142669477	chr3:142623406-142669477	0	+	142664237	142669477	789624	4	156,285,106,88,	0,21889,40795,45983,
#Partially deleted in new
chr3	142654783	142656745	chr3:142654783-142656745	3	-	142654783	142654783	8553170	2	158,188,	0,1774,
#Partially deleted in new
chr3	142656896	142712055	chr3:142656896-142712055	1	+	142664237	142712007	789624	16	284,106,164,130,133,82,166,143,93,196,79,115,134,124,125,184,	0,7305,12493,14096,19260,21135,27109,27356,29387,32721,37572,41056,46971,47566,54604,54975,
#Partially deleted in new
chr3	142664121	142671045	chr3:142664121-142671045	0	+	142664121	142664121	8553170	3	186,164,53,	0,5268,6871,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	142673596	142673904	chr3:142673596-142673904	3	+	142673596	142673596	8553170	1	308,	0,
#Partially deleted in new
chr3	142689629	142698438	chr3:142689629-142698438	0	+	142689629	142689629	8553170	3	184,79,486,	0,4839,8323,
#Partially deleted in new
chr3	142724073	142806428	chr3:142724073-142806428	1	+	142724559	142806235	789624	13	658,155,102,203,132,196,337,140,144,176,202,195,421,	0,12305,19411,24184,53558,56760,60630,66945,68750,78095,79903,80362,81934,
#Partially deleted in new
chr3	142724168	142807888	chr3:142724168-142807888	3	+	142724559	142806235	789624	12	563,155,203,132,196,337,140,144,176,202,195,1881,	0,12210,24089,53463,56665,60535,66850,68655,78000,79808,80267,81839,
#Partially deleted in new
chr3	142724434	142807520	chr3:142724434-142807520	1	+	142724559	142806235	789624	13	37,190,155,203,132,196,337,140,144,176,202,195,1513,	0,107,11944,23823,53197,56399,60269,66584,68389,77734,79542,80001,81573,
#Partially deleted in new
chr3	142724564	142777658	chr3:142724564-142777658	0	+	142724564	142748286	789624	3	167,203,27,	0,23693,53067,
#Partially deleted in new
chr3	142780939	142785287	chr3:142780939-142785287	0	+	142780939	142780939	8553170	2	90,584,	0,3764,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	142801206	142801268	chr3:142801206-142801268	3	+	142801206	142801206	8553170	1	62,	0,
#Partially deleted in new
chr3	142817868	142889203	chr3:142817868-142889203	3	-	142818334	142888896	789624	9	597,168,84,155,137,125,256,109,390,	0,3009,5663,11823,20901,25055,30348,69800,70945,
#Partially deleted in new
chr3	142817914	142829855	chr3:142817914-142829855	0	-	142817914	142817914	8553170	4	551,168,84,164,	0,2963,5617,11777,
#Partially deleted in new
chr3	142817925	142889206	chr3:142817925-142889206	1	-	142818431	142888896	8553170	9	540,223,84,155,137,125,256,109,393,	0,2952,5606,11766,20844,24998,30291,69743,70888,
#Partially deleted in new
chr3	142818258	142888899	chr3:142818258-142888899	1	-	142818431	142888896	789624	7	207,168,137,125,256,109,86,	0,2619,20511,24665,29958,69410,70555,
#Partially deleted in new
chr3	142820966	142848344	chr3:142820966-142848344	0	-	142842937	142848344	789624	7	79,84,155,137,125,65,128,	0,2565,8725,17803,21957,22278,27250,
#Deleted in new
chr3	142827095	142827728	chr3:142827095-142827728	7	-	142827095	142827095	16724991	1	633,	0,
#Partially deleted in new
chr3	142829676	142848322	chr3:142829676-142848322	0	-	142829676	142829676	8553170	4	170,137,125,106,	0,9093,13247,18540,
#Partially deleted in new
chr3	142846651	142889061	chr3:142846651-142889061	0	-	142846651	142846651	8553170	4	91,256,109,248,	0,1565,41017,42162,
#Partially deleted in new
chr3	142863888	142889022	chr3:142863888-142889022	0	-	142863888	142863888	8553170	3	591,109,209,	0,23780,24925,
#Partially deleted in new
chr3	142864109	142888745	chr3:142864109-142888745	0	-	142864109	142864109	8553170	3	370,109,87,	0,23559,24549,
#Deleted in new
chr3	142887225	142888927	chr3:142887225-142888927	0	-	142887225	142887225	8553170	2	552,114,	0,1588,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	142926674	142942534	chr3:142926674-142942534	3	+	142926674	142926674	789624	5	222,64,224,179,1136,	0,6530,9748,11800,14724,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	142938239	142941771	chr3:142938239-142941771	0	+	142938239	142938239	8553170	2	414,373,	0,3159,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	142949163	142962557	chr3:142949163-142962557	0	-	142950548	142962557	789624	3	1413,60,351,	0,3627,13043,
#Deleted in new
chr3	142951562	142962250	chr3:142951562-142962250	0	-	142951793	142962250	789624	3	244,60,44,	0,1228,10644,
#Deleted in new
chr3	142960371	142960543	chr3:142960371-142960543	7	+	142960371	142960371	16724991	1	172,	0,
#Deleted in new
chr3	142960649	142964812	chr3:142960649-142964812	0	+	142960649	142960649	8553170	3	520,172,67,	0,3815,4096,
#Deleted in new
chr3	142961230	142963682	chr3:142961230-142963682	3	-	142962202	142963336	789624	1	2452,	0,
#Deleted in new
chr3	142962382	142964810	chr3:142962382-142964810	0	+	142962382	142962382	8553170	3	240,172,65,	0,2082,2363,
#Deleted in new
chr3	142962953	142964844	chr3:142962953-142964844	0	+	142962953	142962953	8553170	2	141,380,	0,1511,
#Deleted in new
chr3	142962954	142964810	chr3:142962954-142964810	0	+	142962954	142962954	8553170	3	140,172,65,	0,1510,1791,
#Partially deleted in new
chr3	142964057	143001090	chr3:142964057-143001090	3	+	142964057	142964057	789624	5	41,172,144,95,64,	0,407,29939,34342,36969,
#Deleted in new
chr3	142964057	142964812	chr3:142964057-142964812	0	+	142964057	142964057	8553170	3	41,172,67,	0,407,688,
#Deleted in new
chr3	142964129	142964810	chr3:142964129-142964810	0	+	142964129	142964129	8553170	3	201,172,65,	0,335,616,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	142964159	142964903	chr3:142964159-142964903	1	+	142964159	142964159	8553170	2	171,439,	0,305,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	142964439	142965124	chr3:142964439-142965124	1	+	142964439	142964439	8553170	2	197,379,	0,306,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	142964496	142967466	chr3:142964496-142967466	0	+	142964496	142964496	8553170	2	140,559,	0,2411,
#Partially deleted in new
chr3	142964496	143001559	chr3:142964496-143001559	0	+	142964496	142964496	8553170	4	140,144,95,533,	0,29500,33903,36530,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	142964496	142990587	chr3:142964496-142990587	0	+	142964496	142964496	8553170	2	140,573,	0,25518,
#Partially deleted in new
chr3	142964496	142994817	chr3:142964496-142994817	0	+	142964496	142964496	8553170	3	140,144,217,	0,29500,30104,
#Partially deleted in new
chr3	142964496	143016371	chr3:142964496-143016371	0	+	142998464	143016371	789624	6	140,144,95,132,99,115,	0,29500,33903,47725,49814,51760,
#Partially deleted in new
chr3	142964581	142969769	chr3:142964581-142969769	0	+	142964581	142964581	8553170	2	55,472,	0,4716,
#Deleted in new
chr3	143000906	143001467	chr3:143000906-143001467	3	-	143000906	143000906	789624	1	561,	0,
#Partially deleted in new
chr3	143001167	143056500	chr3:143001167-143056500	0	+	143001628	143027196	789624	27	506,45,132,99,115,134,68,95,36,83,166,212,105,67,164,163,80,88,123,157,96,67,160,111,119,177,189,	0,9647,11054,13143,15089,15674,18801,19431,20182,20305,21329,21685,25981,27172,27315,31616,32103,33720,34814,36011,36940,37726,41949,49771,52508,53775,55144,
#Partially deleted in new
chr3	143001523	143016888	chr3:143001523-143016888	0	+	143001628	143016888	789624	6	150,45,132,99,115,47,	0,9291,10698,12787,14733,15318,
#Partially deleted in new
chr3	143001538	143060546	chr3:143001538-143060546	3	+	143001628	143056450	789624	28	135,45,132,99,115,134,68,95,36,83,166,212,44,105,67,164,163,80,88,123,157,96,67,160,111,119,177,4235,	0,9276,10683,12772,14718,15303,18430,19060,19811,19934,20958,21314,22436,25610,26801,26944,31245,31732,33349,34443,35640,36569,37355,41578,49400,52137,53404,54773,
#Partially deleted in new
chr3	143001609	143023395	chr3:143001609-143023395	0	+	143001609	143001609	8553170	12	64,45,132,99,115,134,68,95,36,83,166,543,	0,9205,10612,12701,14647,15232,18359,18989,19740,19863,20887,21243,
#Partially deleted in new
chr3	143001620	143056846	chr3:143001620-143056846	1	+	143001628	143056450	789624	28	53,45,132,99,115,134,68,95,33,83,166,212,44,105,71,160,163,80,88,123,157,96,67,160,111,119,177,535,	0,9194,10601,12690,14636,15221,18348,18978,19729,19852,20876,21232,22354,25528,26719,26866,31163,31650,33267,34361,35558,36487,37273,41496,49318,52055,53322,54691,
#Partially deleted in new
chr3	143001622	143057653	chr3:143001622-143057653	0	+	143001622	143024523	789624	29	51,45,132,99,115,134,68,95,36,83,166,212,44,65,105,67,164,163,80,88,123,157,96,67,160,111,119,177,1342,	0,9192,10599,12688,14634,15219,18346,18976,19727,19850,20874,21230,22352,22861,25526,26717,26860,31161,31648,33265,34359,35556,36485,37271,41494,49316,52053,53320,54689,
#Partially deleted in new
chr3	143001626	143021585	chr3:143001626-143021585	0	+	143001626	143001626	8553170	10	47,45,132,99,115,134,68,95,33,113,	0,9188,10595,12684,14630,15215,18342,18972,19723,19846,
#Partially deleted in new
chr3	143002227	143016887	chr3:143002227-143016887	0	+	143012221	143016887	789624	6	134,45,132,99,115,46,	0,8587,9994,12083,14029,14614,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	143011938	143016860	chr3:143011938-143016860	0	+	143011938	143011938	8553170	5	85,152,99,115,19,	0,283,2372,4318,4903,
#Deleted in new
chr3	143012252	143017350	chr3:143012252-143017350	0	+	143012252	143012252	8553170	4	101,99,115,509,	0,2058,4004,4589,
#Partially deleted in new
chr3	143016891	143027270	chr3:143016891-143027270	0	+	143016891	143016891	8553170	8	84,68,95,36,83,166,212,122,	0,3077,3707,4458,4581,5605,5961,10257,
#Partially deleted in new
chr3	143025781	143053782	chr3:143025781-143053782	0	+	143025781	143025781	8553170	13	1472,67,164,163,80,88,123,157,96,67,160,111,107,	0,2558,2701,7002,7489,9106,10200,11397,12326,13112,17335,25157,27894,
#Partially deleted in new
chr3	143026561	143034903	chr3:143026561-143034903	0	+	143026561	143026561	8553170	6	692,67,164,163,80,16,	0,1778,1921,6222,6709,8326,
#Deleted in new
chr3	143034526	143036072	chr3:143034526-143036072	0	+	143034526	143034526	8553170	2	449,91,	0,1455,
#Partially deleted in new
chr3	143036082	143056846	chr3:143036082-143056846	0	+	143036082	143056450	789624	8	22,157,96,67,160,111,119,535,	0,1096,2025,2811,7034,14856,17593,20229,
#Deleted in new
chr3	143036878	143038206	chr3:143036878-143038206	0	+	143036878	143036878	8553170	2	457,99,	0,1229,
#Deleted in new
chr3	143111801	143112359	chr3:143111801-143112359	3	+	143111801	143111801	8553170	2	157,211,	0,347,
#Deleted in new
chr3	143119330	143124014	chr3:143119330-143124014	3	+	143120816	143122409	789624	2	1211,3371,	0,1313,
#Partially deleted in new
chr3	143123361	143131893	chr3:143123361-143131893	0	+	143123361	143123361	8553170	2	215,176,	0,8356,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	143131273	143131891	chr3:143131273-143131891	3	+	143131273	143131273	8553170	2	355,174,	0,444,
#Deleted in new
chr3	143176326	143177617	chr3:143176326-143177617	7	+	143176326	143176326	16724991	1	1291,	0,
#Partially deleted in new
chr3	143265221	143848531	chr3:143265221-143848531	3	-	143266701	143848322	789624	16	1708,106,80,55,154,112,114,89,106,139,106,116,77,78,203,384,	0,3653,98262,116838,201815,228431,230113,287140,308866,313363,387033,427970,529779,531604,566797,582926,
#Deleted in new
chr3	143313066	143314429	chr3:143313066-143314429	3	-	143313066	143313066	8553170	2	251,190,	0,1173,
#Deleted in new
chr3	143503274	143504273	chr3:143503274-143504273	7	-	143503274	143503274	16724991	1	999,	0,
#Deleted in new
chr3	143517122	143518229	chr3:143517122-143518229	7	-	143517122	143517122	16724991	1	1107,	0,
#Partially deleted in new
chr3	143552418	143698149	chr3:143552418-143698149	0	-	143552418	143552418	8553170	6	32,106,139,106,116,70,	0,21669,26166,99836,140773,145661,
#Partially deleted in new
chr3	143620527	143627690	chr3:143620527-143627690	7	+	143620527	143620527	16724991	3	86,79,519,	0,6254,6644,
#Partially deleted in new
chr3	143693209	143848485	chr3:143693209-143848485	0	-	143796892	143848322	789624	4	98,77,78,338,	0,101791,103616,154938,
#Partially deleted in new
chr3	143795012	143848458	chr3:143795012-143848458	0	-	143795012	143848322	789624	3	65,203,311,	0,37006,53135,
#Partially deleted in new
chr3	143847593	143848469	chr3:143847593-143848469	0	-	143847593	143847593	8553170	2	390,322,	0,554,
#Partially deleted in new
chr3	143855738	143856142	chr3:143855738-143856142	7	-	143855738	143855738	16724991	1	404,	0,
#Partially deleted in new
chr3	143971797	143992359	chr3:143971797-143992359	3	+	143972332	143989841	789624	3	1192,304,2850,	0,13745,17712,
#Partially deleted in new
chr3	143972636	144048719	chr3:143972636-144048719	0	+	143972636	143972636	8553170	3	353,131,52,	0,61913,76031,
#Partially deleted in new
chr3	143972654	143985562	chr3:143972654-143985562	0	+	143972654	143972654	8553170	3	335,61,20,	0,5807,12888,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	143972876	143986155	chr3:143972876-143986155	0	+	143972876	143972876	8553170	2	113,613,	0,12666,
#Partially deleted in new
chr3	143973080	143990599	chr3:143973080-143990599	1	+	143973532	143989841	789624	3	482,304,1090,	0,12462,16429,
#Partially deleted in new
chr3	143973089	143989769	chr3:143973089-143989769	0	+	143973180	143989769	789624	3	166,304,260,	0,12453,16420,
#Partially deleted in new
chr3	143973607	143992367	chr3:143973607-143992367	1	+	143985599	143989841	789624	3	98,304,2858,	0,11935,15902,
#Deleted in new
chr3	144186904	144187020	chr3:144186904-144187020	7	-	144186904	144186904	16724991	1	116,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	144442210	144445844	chr3:144442210-144445844	3	-	144442210	144442210	8553170	1	3634,	0,
#Deleted in new
chr3	145523537	145524415	chr3:145523537-145524415	7	+	145523537	145523537	16724991	1	878,	0,
#Deleted in new
chr3	145684571	145685092	chr3:145684571-145685092	7	+	145684571	145684571	16724991	1	521,	0,
#Partially deleted in new
chr3	145824256	145824739	chr3:145824256-145824739	7	-	145824256	145824256	16724991	1	483,	0,
#Partially deleted in new
chr3	145939911	145961536	chr3:145939911-145961536	3	+	145939911	145939911	8553170	4	243,218,118,220,	0,6492,17483,21405,
#Partially deleted in new
chr3	145939967	145957831	chr3:145939967-145957831	1	+	145939967	145939967	8553170	2	187,437,	0,17427,
#Partially deleted in new
chr3	145961754	145963623	chr3:145961754-145963623	3	+	145961754	145961754	8553170	2	466,103,	0,1766,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	146059584	146061679	chr3:146059584-146061679	3	-	146059584	146059584	8553170	1	2095,	0,
#Deleted in new
chr3	146064041	146065122	chr3:146064041-146065122	0	+	146064041	146064041	8553170	2	209,236,	0,845,
#Partially deleted in new
chr3	146066343	146069185	chr3:146066343-146069185	3	-	146066343	146066343	789624	2	342,367,	0,2475,
#Partially deleted in new
chr3	146069439	146161167	chr3:146069439-146161167	3	-	146070716	146160989	789624	20	1433,126,147,105,66,114,63,142,126,105,122,126,102,98,64,113,164,137,92,287,	0,1602,1837,3121,3847,7342,8422,9676,12298,15729,17347,19146,22360,33315,34839,37092,40845,51672,54698,91441,
#Partially deleted in new
chr3	146069439	146085889	chr3:146069439-146085889	1	-	146070716	146085380	789624	10	1433,126,147,105,66,114,63,142,126,721,	0,1602,1837,3121,3847,7342,8422,9676,12298,15729,
#Partially deleted in new
chr3	146069443	146161167	chr3:146069443-146161167	1	-	146070716	146160989	789624	19	1429,126,147,105,66,114,142,126,105,122,126,102,98,64,113,164,137,92,287,	0,1598,1833,3117,3843,7338,9672,12294,15725,17343,19142,22356,33311,34835,37088,40841,51668,54694,91437,
#Partially deleted in new
chr3	146070180	146160992	chr3:146070180-146160992	1	-	146070716	146124173	789624	20	692,126,147,105,66,114,63,142,126,105,122,126,102,98,64,113,164,137,92,204,	0,861,1096,2380,3106,6601,7681,8935,11557,14988,16606,18405,21619,32574,34098,36351,40104,50931,53957,90608,
#Deleted in new
chr3	146070240	146071170	chr3:146070240-146071170	0	-	146070240	146070240	8553170	2	632,129,	0,801,
#Deleted in new
chr3	146072556	146073657	chr3:146072556-146073657	0	-	146072556	146072556	8553170	2	109,371,	0,730,
#Partially deleted in new
chr3	146075924	146086735	chr3:146075924-146086735	0	-	146075924	146075924	8553170	4	2000,142,126,1567,	0,3191,5813,9244,
#Partially deleted in new
chr3	146081790	146088815	chr3:146081790-146088815	0	-	146081790	146081790	8553170	4	73,105,122,230,	0,3378,4996,6795,
#Partially deleted in new
chr3	146102759	146163653	chr3:146102759-146163653	0	-	146102759	146163618	789624	7	93,64,113,164,137,92,60,	0,1519,3772,7525,18352,21378,60834,
#Partially deleted in new
chr3	146110299	146160991	chr3:146110299-146160991	0	-	146121213	146160989	789624	5	149,137,61,92,111,	0,10812,12965,13838,50581,
#Partially deleted in new
chr3	146192338	146251179	chr3:146192338-146251179	3	-	146194410	146222071	0	9	2117,159,162,227,43,236,111,28,220,	0,2785,4293,7474,8696,14187,28476,29726,58621,
#Partially deleted in new
chr3	146192338	146251179	chr3:146192338-146251179	1	-	146194410	146222071	789624	7	2117,159,162,236,111,28,220,	0,2785,4293,14187,28476,29726,58621,
#Partially deleted in new
chr3	146192404	146251079	chr3:146192404-146251079	1	-	146194410	146220887	0	6	2051,159,162,236,111,120,	0,2719,4227,14121,28410,58555,
#Partially deleted in new
chr3	146194290	146250867	chr3:146194290-146250867	1	-	146194410	146222071	0	9	165,159,162,227,43,236,111,28,311,	0,833,2341,5522,6744,12235,26524,27774,56266,
#Partially deleted in new
chr3	146194356	146251143	chr3:146194356-146251143	1	-	146194410	146222071	0	11	99,159,162,227,43,236,111,28,45,81,184,	0,767,2275,5456,6678,12169,26458,27708,29376,56200,56603,
#Partially deleted in new
chr3	146196404	146222092	chr3:146196404-146222092	0	-	146196404	146196404	8553170	5	389,43,236,111,28,	0,4630,10121,24410,25660,
#Partially deleted in new
chr3	146196631	146251125	chr3:146196631-146251125	0	-	146196631	146222071	789624	8	162,227,43,236,111,28,81,166,	0,3181,4403,9894,24183,25433,53925,54328,
#Partially deleted in new
chr3	146196705	146251105	chr3:146196705-146251105	0	-	146196705	146222071	789624	5	88,236,111,28,146,	0,9820,24109,25359,54254,
#Partially deleted in new
chr3	146199812	146251083	chr3:146199812-146251083	0	-	146199812	146222071	789624	7	227,43,236,111,28,45,124,	0,1222,6713,21002,22252,23920,51147,
#Partially deleted in new
chr3	146200008	146222433	chr3:146200008-146222433	0	-	146200008	146222071	789624	6	31,43,236,111,28,234,	0,1026,6517,20806,22056,22191,
#Partially deleted in new
chr3	146206586	146222371	chr3:146206586-146222371	0	-	146206586	146222071	789624	3	175,111,307,	0,14228,15478,
#Partially deleted in new
chr3	146342995	146348480	chr3:146342995-146348480	7	-	146342995	146342995	16724991	3	225,39,169,	0,1167,5316,
#Partially deleted in new
chr3	146391362	146416603	chr3:146391362-146416603	5	-	146391362	146391362	16724991	5	200,162,200,43,100,	0,4397,9997,23762,25141,
#Partially deleted in new
chr3	146391420	146460074	chr3:146391420-146460074	0	-	146395904	146459904	789624	4	142,162,43,227,	0,4339,66990,68427,
#Partially deleted in new
chr3	146395739	146416577	chr3:146395739-146416577	7	-	146395739	146395739	16724991	4	176,167,222,72,	0,2917,5615,20766,
#Partially deleted in new
chr3	146433287	146495935	chr3:146433287-146495935	3	-	146441791	146459904	789624	9	230,64,162,162,221,43,236,113,41,	0,8470,15918,20714,21951,25123,26560,26884,62607,
#Partially deleted in new
chr3	146433294	146495991	chr3:146433294-146495991	1	-	146441791	146495922	789624	8	223,64,162,162,221,43,236,97,	0,8463,15911,20707,21944,25116,26553,62600,
#Partially deleted in new
chr3	146433444	146469301	chr3:146433444-146469301	1	-	146441791	146461873	789624	10	73,64,162,162,221,43,236,123,160,197,	0,8313,15761,20557,21794,24966,26403,28389,30390,35660,
#Partially deleted in new
chr3	146441763	146460290	chr3:146441763-146460290	1	-	146441791	146459904	789624	7	58,162,162,221,43,236,119,	0,7442,12238,13475,16647,18084,18408,
#Partially deleted in new
chr3	146454001	146495991	chr3:146454001-146495991	0	-	146454001	146459904	789624	5	162,221,43,236,97,	0,1237,4409,5846,41893,
#Partially deleted in new
chr3	146494593	146495954	chr3:146494593-146495954	0	-	146494593	146494593	8553170	2	439,60,	0,1301,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	146504569	146506560	chr3:146504569-146506560	3	-	146504569	146504569	8553170	1	1991,	0,
#Partially deleted in new
chr3	146515179	146544864	chr3:146515179-146544864	3	-	146516044	146536552	0	9	922,162,162,221,43,218,81,26,398,	0,1826,6364,6653,10425,13434,18290,21360,29287,
#Partially deleted in new
chr3	146515180	146544521	chr3:146515180-146544521	0	-	146525615	146536552	789624	8	921,162,43,81,26,49,47,55,	0,1825,10424,18289,21359,22815,25953,29286,
#Partially deleted in new
chr3	146515801	146544555	chr3:146515801-146544555	0	-	146525615	146536552	789624	6	300,162,43,81,26,89,	0,1204,9803,17668,20738,28665,
#Partially deleted in new
chr3	146515816	146544737	chr3:146515816-146544737	1	-	146516044	146533542	789624	8	285,162,162,221,43,218,81,271,	0,1189,5727,6016,9788,12797,17653,28650,
#Partially deleted in new
chr3	146515951	146544555	chr3:146515951-146544555	0	-	146525615	146536552	789624	9	150,162,162,221,43,81,26,49,89,	0,1054,5592,5881,9653,17518,20588,22044,28515,
#Partially deleted in new
chr3	146515954	146544620	chr3:146515954-146544620	1	-	146516044	146533538	0	8	147,162,162,221,43,81,26,154,	0,1051,5589,5878,9650,17515,20585,28512,
#Partially deleted in new
chr3	146516058	146544530	chr3:146516058-146544530	0	-	146525615	146536552	789624	7	43,162,162,43,81,26,64,	0,947,5485,9546,17411,20481,28408,
#Partially deleted in new
chr3	146516069	146544547	chr3:146516069-146544547	0	-	146525615	146536552	789624	8	32,162,510,43,81,26,49,81,	0,936,5474,9535,17400,20470,21926,28397,
#Partially deleted in new
chr3	146516087	146528750	chr3:146516087-146528750	0	-	146516087	146528750	789624	5	14,162,158,43,137,	0,918,5456,9517,12526,
#Deleted in new
chr3	146516439	146517394	chr3:146516439-146517394	0	-	146516439	146516439	8553170	2	257,372,	0,583,
#Partially deleted in new
chr3	146516902	146544538	chr3:146516902-146544538	0	-	146525615	146536552	789624	7	265,162,221,43,81,26,72,	0,4641,4930,8702,16567,19637,27564,
#Deleted in new
chr3	146517011	146521712	chr3:146517011-146521712	0	-	146517011	146517011	8553170	3	156,15,169,	0,3154,4532,
#Partially deleted in new
chr3	146517088	146544570	chr3:146517088-146544570	0	-	146517088	146536552	789624	8	79,162,149,43,218,81,26,104,	0,4455,4744,8516,11525,16381,19451,27378,
#Partially deleted in new
chr3	146517148	146544641	chr3:146517148-146544641	0	-	146517148	146533538	789624	6	19,162,221,43,81,175,	0,4395,4684,8456,16321,27318,
#Partially deleted in new
chr3	146517157	146544856	chr3:146517157-146544856	0	-	146517157	146536552	789624	9	10,162,221,43,218,81,26,47,390,	0,4386,4675,8447,11456,16312,19382,23976,27309,
#Partially deleted in new
chr3	146521716	146544578	chr3:146521716-146544578	0	-	146521716	146521716	8553170	6	337,43,218,81,26,112,	0,3888,6897,11753,14823,22750,
#Partially deleted in new
chr3	146525528	146536819	chr3:146525528-146536819	0	-	146525528	146525528	8553170	3	119,81,280,	0,7941,11011,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	146527942	146544727	chr3:146527942-146544727	0	-	146527942	146527942	8553170	4	889,81,26,261,	0,5527,8597,16524,
#Partially deleted in new
chr3	146540852	146544553	chr3:146540852-146544553	0	-	146540852	146540852	8553170	2	328,87,	0,3614,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	146571476	146571583	chr3:146571476-146571583	3	+	146571476	146571476	8553170	1	107,	0,
#Partially deleted in new
chr3	146576554	146605239	chr3:146576554-146605239	3	-	146586073	146605212	789624	8	171,83,162,162,221,43,176,40,	0,9475,13098,15165,17365,18486,23733,28645,
#Partially deleted in new
chr3	146576558	146605239	chr3:146576558-146605239	1	-	146586073	146605212	789624	8	167,83,162,162,221,43,140,40,	0,9471,13094,15161,17361,18482,23765,28641,
#Partially deleted in new
chr3	146585837	146606216	chr3:146585837-146606216	1	-	146586073	146605212	789624	8	105,83,162,162,221,43,176,1017,	0,192,3815,5882,8082,9203,14450,19362,
#Deleted in new
chr3	146589601	146590325	chr3:146589601-146590325	3	+	146589601	146589601	8553170	2	187,263,	0,461,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	146909684	147370656	chr3:146909684-147370656	3	-	146909684	146909684	8553170	6	27,118,196,97,108,24,	0,9383,16770,246780,460483,460948,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	146921922	146923841	chr3:146921922-146923841	1	+	146921922	146921922	789624	3	252,24,240,	0,1378,1679,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	146921962	146925218	chr3:146921962-146925218	3	+	146921962	146921962	789624	2	212,1617,	0,1639,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	146996606	146996713	chr3:146996606-146996713	3	-	146996606	146996606	8553170	1	107,	0,
#Deleted in new
chr3	147276767	147277252	chr3:147276767-147277252	7	+	147276767	147276767	16724991	2	220,239,	0,246,
#Partially deleted in new
chr3	147386045	147406860	chr3:147386045-147406860	3	-	147388858	147402797	789624	5	2814,316,618,85,498,	0,4885,9806,16682,20317,
#Partially deleted in new
chr3	147386047	147405520	chr3:147386047-147405520	1	-	147388858	147405471	789624	5	2812,316,618,85,148,	0,4883,9804,16680,19325,
#Deleted in new
chr3	147386047	147392391	chr3:147386047-147392391	0	-	147386047	147386047	789624	3	2812,316,422,	0,4883,5922,
#Partially deleted in new
chr3	147386047	147404284	chr3:147386047-147404284	1	-	147388858	147404098	789624	5	2812,316,618,85,321,	0,4883,9804,16680,17916,
#Deleted in new
chr3	147386966	147387453	chr3:147386966-147387453	3	+	147386966	147386966	8553170	2	133,135,	0,352,
#Deleted in new
chr3	147387545	147397186	chr3:147387545-147397186	0	-	147387545	147387545	8553170	3	1314,316,1335,	0,3385,8306,
#Deleted in new
chr3	147387545	147392933	chr3:147387545-147392933	0	-	147387545	147387545	8553170	2	1314,2003,	0,3385,
#Partially deleted in new
chr3	147388425	147404284	chr3:147388425-147404284	1	-	147388858	147402797	789624	5	434,316,618,85,321,	0,2505,7426,14302,15538,
#Partially deleted in new
chr3	147388545	147405520	chr3:147388545-147405520	1	-	147388858	147402797	789624	5	314,316,618,85,148,	0,2385,7306,14182,16827,
#Deleted in new
chr3	147388649	147392430	chr3:147388649-147392430	0	-	147388649	147388649	8553170	3	210,316,308,	0,2281,3473,
#Deleted in new
chr3	147388706	147389372	chr3:147388706-147389372	0	-	147388706	147388706	8553170	2	153,381,	0,285,
#Deleted in new
chr3	147388741	147393887	chr3:147388741-147393887	0	-	147388741	147388741	8553170	3	118,316,176,	0,2189,4970,
#Partially deleted in new
chr3	147388763	147406790	chr3:147388763-147406790	1	-	147388858	147402797	789624	4	96,316,85,428,	0,2167,13964,17599,
#Deleted in new
chr3	147388841	147392397	chr3:147388841-147392397	0	-	147388841	147388841	8553170	3	18,316,374,	0,2089,3182,
#Partially deleted in new
chr3	147393421	147507986	chr3:147393421-147507986	0	+	147393421	147393421	8553170	2	521,46,	0,114519,
#Partially deleted in new
chr3	147393894	147413680	chr3:147393894-147413680	0	+	147393894	147413551	789624	3	48,164,327,	0,18623,19459,
#Partially deleted in new
chr3	147395851	147406133	chr3:147395851-147406133	0	-	147395851	147402797	789624	3	618,85,226,	0,6876,10056,
#Partially deleted in new
chr3	147396306	147403798	chr3:147396306-147403798	0	-	147396306	147402797	789624	3	163,85,252,	0,6421,7240,
#Partially deleted in new
chr3	147396334	147406532	chr3:147396334-147406532	0	-	147396334	147402797	789624	4	135,85,175,170,	0,6393,9340,10028,
#Deleted in new
chr3	147405451	147406809	chr3:147405451-147406809	0	-	147405451	147405451	8553170	2	398,447,	0,911,
#Deleted in new
chr3	147409383	147416719	chr3:147409383-147416719	3	+	147410112	147413551	789624	3	1711,164,3366,	0,3134,3970,
#Partially deleted in new
chr3	147421326	147510293	chr3:147421326-147510293	0	+	147421326	147421326	789624	3	233,112,699,	0,86614,88268,
#Partially deleted in new
chr3	147507940	147509905	chr3:147507940-147509905	0	+	147507940	147507940	8553170	2	107,311,	0,1654,
#Deleted in new
chr3	147590995	147591835	chr3:147590995-147591835	7	-	147590995	147590995	16724991	1	840,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	147844122	147846657	chr3:147844122-147846657	3	-	147844122	147844122	8553170	3	400,25,68,	0,499,2467,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	147940003	147943014	chr3:147940003-147943014	1	+	147940003	147940003	8553170	2	113,2456,	0,555,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	147940019	148006755	chr3:147940019-148006755	3	+	147940019	147940019	8553170	4	97,61,98,168,	0,539,55735,66568,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	148028045	148079637	chr3:148028045-148079637	3	-	148028045	148028045	8553170	5	1379,91,120,130,39,	0,11192,13589,14132,51553,
#Partially deleted in new
chr3	148078158	148088029	chr3:148078158-148088029	3	+	148078158	148078158	789624	2	99,292,	0,9579,
#Partially deleted in new
chr3	148090340	148096921	chr3:148090340-148096921	3	+	148090340	148090340	8553170	3	122,93,493,	0,2712,6088,
#Partially deleted in new
chr3	148093174	148127233	chr3:148093174-148127233	3	+	148093174	148093174	8553170	4	33,125,68,266,	0,14021,22367,33793,
#Deleted in new
chr3	148166343	148167298	chr3:148166343-148167298	7	-	148166343	148166343	16724991	1	955,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	148191718	148226606	chr3:148191718-148226606	0	+	148191718	148191718	8553170	3	47,99,230,	0,4230,34658,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	148195728	148280098	chr3:148195728-148280098	3	-	148195728	148195728	8553170	5	106,89,64,103,317,	0,12117,14296,24781,84053,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	148280890	148312160	chr3:148280890-148312160	1	+	148280890	148280890	8553170	3	219,109,50,	0,8044,31220,
#Partially deleted in new
chr3	148312146	148399956	chr3:148312146-148399956	3	+	148312146	148312146	8553170	3	106,104,180,	0,50051,87630,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	148368383	148591927	chr3:148368383-148591927	3	-	148368383	148368383	8553170	6	110,110,82,96,179,110,	0,16376,77882,78519,86969,223434,
#Partially deleted in new
chr3	148695993	148696204	chr3:148695993-148696204	7	-	148695993	148695993	16724991	1	211,	0,
#Partially deleted in new
chr3	148697783	148743003	chr3:148697783-148743003	3	+	148741035	148742115	0	2	344,2015,	0,43205,
#Partially deleted in new
chr3	148697870	148743003	chr3:148697870-148743003	1	+	148741035	148742115	0	3	257,84,2015,	0,10073,43118,
#Partially deleted in new
chr3	148697917	148743008	chr3:148697917-148743008	1	+	148741035	148742115	0	2	232,2020,	0,43071,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	148698174	148731497	chr3:148698174-148731497	0	+	148698174	148698174	8553170	5	132,84,58,172,307,	0,9769,32005,32163,33016,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	148730099	148742247	chr3:148730099-148742247	1	+	148741035	148742115	0	3	410,126,1259,	0,1091,10889,
#Partially deleted in new
chr3	148730099	148742247	chr3:148730099-148742247	1	+	148741035	148742115	0	2	410,1259,	0,10889,
#Partially deleted in new
chr3	148730123	148742247	chr3:148730123-148742247	1	+	148741035	148742115	0	3	114,172,1259,	0,214,10865,
#Partially deleted in new
chr3	148730179	148743001	chr3:148730179-148743001	1	+	148730179	148742115	789624	2	58,2013,	0,10809,
#Deleted in new
chr3	148739797	148743001	chr3:148739797-148743001	1	+	148739916	148742115	789624	2	159,2013,	0,1191,
#Partially deleted in new
chr3	148791101	148860187	chr3:148791101-148860187	3	+	148827823	148860002	0	12	164,241,76,125,100,102,102,111,91,203,85,373,	0,36552,36900,43396,49584,49772,50721,53376,53575,54322,66355,68713,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	148805659	148834528	chr3:148805659-148834528	0	+	148827823	148834528	789624	4	237,241,76,31,	0,21994,22342,28838,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	148810675	148840711	chr3:148810675-148840711	0	+	148827823	148840711	789624	5	116,241,76,125,26,	0,16978,17326,23822,30010,
#Deleted in new
chr3	148824781	148825387	chr3:148824781-148825387	7	-	148824781	148824781	16724991	1	606,	0,
#Partially deleted in new
chr3	148827800	148860183	chr3:148827800-148860183	1	+	148827823	148860002	0	11	94,76,125,100,102,102,111,91,203,85,369,	0,201,6697,12885,13073,14022,16677,16876,17623,29656,32014,
#Partially deleted in new
chr3	148827819	148844701	chr3:148827819-148844701	0	+	148827823	148844701	789624	7	75,76,125,100,102,111,25,	0,182,6678,12866,14003,16658,16857,
#Partially deleted in new
chr3	148827923	148841835	chr3:148827923-148841835	0	+	148827923	148827923	8553170	4	154,125,290,13,	0,6574,12762,13899,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	148838174	148844496	chr3:148838174-148844496	0	+	148838174	148838174	8553170	5	238,100,102,102,19,	0,2511,2699,3648,6303,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	148850932	148960112	chr3:148850932-148960112	3	-	148850932	148850932	8553170	5	1008,102,142,96,66,	0,3214,19015,60324,109114,
#Partially deleted in new
chr3	148854340	148860187	chr3:148854340-148860187	0	+	148854340	148854340	8553170	2	3201,373,	0,5474,
#Partially deleted in new
chr3	148856442	148860187	chr3:148856442-148860187	0	+	148856442	148856442	8553170	3	346,85,373,	0,1014,3372,
#Partially deleted in new
chr3	148857526	148860183	chr3:148857526-148860183	0	+	148857526	148857526	8553170	2	72,369,	0,2288,
#Partially deleted in new
chr3	148865255	148897196	chr3:148865255-148897196	3	+	148865307	148896707	789624	11	120,76,125,103,102,102,111,91,203,85,677,	0,217,3659,13185,13391,14532,16266,17249,18357,20837,31264,
#Partially deleted in new
chr3	148881468	148896522	chr3:148881468-148896522	0	+	148881468	148881468	8553170	5	164,91,203,85,3,	0,1036,2144,4624,15051,
#Deleted in new
chr3	148985867	148987668	chr3:148985867-148987668	7	-	148985867	148985867	16724991	1	1801,	0,
#Partially deleted in new
chr3	148991340	149027632	chr3:148991340-149027632	3	+	148991640	149026933	0	8	307,136,175,163,127,220,51,873,	0,2801,4961,5401,17935,32712,35111,35419,
#Partially deleted in new
chr3	148991407	149027668	chr3:148991407-149027668	1	+	148991640	149024165	789624	6	240,136,175,151,220,909,	0,2734,4894,5334,32645,35352,
#Partially deleted in new
chr3	148991451	149027632	chr3:148991451-149027632	1	+	148991640	149026933	0	7	196,136,175,163,127,220,873,	0,2690,4850,5290,17824,32601,35308,
#Partially deleted in new
chr3	148991511	149024255	chr3:148991511-149024255	1	+	148991640	149024165	789624	5	136,136,175,151,203,	0,2630,4790,5230,32541,
#Partially deleted in new
chr3	148991539	148996847	chr3:148991539-148996847	0	+	148991539	148991539	8553170	4	108,136,126,106,	0,2602,4762,5202,
#Partially deleted in new
chr3	148991557	149027631	chr3:148991557-149027631	1	+	148991640	149026991	0	6	90,136,175,163,127,872,	0,2584,4744,5184,17718,35202,
#Partially deleted in new
chr3	148991567	148996892	chr3:148991567-148996892	0	+	148994272	148996892	789624	5	80,115,136,175,151,	0,1090,2574,4734,5174,
#Partially deleted in new
chr3	148991571	149024253	chr3:148991571-149024253	0	+	148991640	149024253	789624	6	76,136,175,151,127,201,	0,2570,4730,5170,17704,32481,
#Partially deleted in new
chr3	148992370	148996476	chr3:148992370-148996476	0	+	148994272	148996476	789624	3	402,136,175,	0,1771,3931,
#Partially deleted in new
chr3	148994211	148996760	chr3:148994211-148996760	0	+	148994211	148994211	8553170	3	49,162,19,	0,2103,2530,
#Partially deleted in new
chr3	148996830	149009389	chr3:148996830-149009389	0	+	148996830	148996830	8553170	3	74,46,114,	0,7122,12445,
#Partially deleted in new
chr3	149000933	149008276	chr3:149000933-149008276	0	+	149000933	149000933	8553170	5	250,148,46,105,25,	0,512,3019,7065,7318,
#Partially deleted in new
chr3	149003953	149027347	chr3:149003953-149027347	0	+	149003953	149003953	8553170	3	97,127,588,	0,5322,22806,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	149008880	149024234	chr3:149008880-149024234	0	+	149008880	149008880	8553170	2	522,182,	0,15172,
#Partially deleted in new
chr3	149030126	149086530	chr3:149030126-149086530	3	-	149032219	149086336	0	25	2246,81,181,113,126,179,125,180,136,139,144,98,90,45,80,94,76,96,192,75,98,134,167,208,214,	0,4791,8922,9454,9904,11363,12039,15953,17901,18736,20105,25176,29591,30516,30652,33304,34664,38113,41125,41456,43098,44088,45754,54555,56190,
#Partially deleted in new
chr3	149030126	149086522	chr3:149030126-149086522	1	-	149032219	149086336	789624	25	2246,81,181,113,126,179,125,180,136,139,144,98,87,45,80,94,76,96,192,75,98,134,167,208,206,	0,4791,8922,9454,9904,11363,12039,15953,17901,18736,20105,25176,29591,30516,30652,33304,34664,38113,41125,41456,43098,44088,45754,54555,56190,
#Partially deleted in new
chr3	149030684	149086504	chr3:149030684-149086504	1	-	149032219	149086336	0	26	679,172,81,181,113,126,179,125,180,136,139,144,98,90,45,80,94,76,96,192,75,98,134,167,208,188,	0,1516,4233,8364,8896,9346,10805,11481,15395,17343,18178,19547,24618,29033,29958,30094,32746,34106,37555,40567,40898,42540,43530,45196,53997,55632,
#Partially deleted in new
chr3	149030994	149086554	chr3:149030994-149086554	1	-	149032219	149086336	0	26	366,172,81,181,113,126,179,125,180,136,139,144,98,90,45,80,94,76,96,192,75,98,134,167,208,238,	0,1206,3923,8054,8586,9036,10495,11171,15085,17033,17868,19237,24308,28723,29648,29784,32436,33796,37245,40257,40588,42230,43220,44886,53687,55322,
#Partially deleted in new
chr3	149034922	149050240	chr3:149034922-149050240	0	-	149034922	149050240	789624	10	76,181,113,126,191,125,180,136,139,9,	0,4126,4658,5108,6567,7243,11157,13105,13940,15309,
#Partially deleted in new
chr3	149034988	149040259	chr3:149034988-149040259	0	-	149034988	149034988	8553170	4	10,181,113,229,	0,4060,4592,5042,
#Partially deleted in new
chr3	149040141	149042044	chr3:149040141-149042044	0	-	149040141	149040141	8553170	2	15,555,	0,1348,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	149083631	149086505	chr3:149083631-149086505	0	-	149083631	149083631	8553170	3	104,208,189,	0,1050,2685,
#Partially deleted in new
chr3	149086331	149102823	chr3:149086331-149102823	3	+	149086331	149086331	5263520	3	147,31,237,	0,13169,16255,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	149094352	149094462	chr3:149094352-149094462	3	-	149094352	149094352	8553170	1	110,	0,
#Deleted in new
chr3	149099498	149099815	chr3:149099498-149099815	7	-	149099498	149099498	16724991	1	317,	0,
#Partially deleted in new
chr3	149129583	149173732	chr3:149129583-149173732	3	+	149129723	149172222	789624	17	357,495,172,86,193,82,155,109,182,181,234,186,189,108,207,91,1638,	0,10420,11433,11711,15770,21015,23910,25523,27766,29082,30462,32564,33106,34258,37450,38309,42511,
#Partially deleted in new
chr3	149129637	149172361	chr3:149129637-149172361	1	+	149129723	149172222	789624	16	303,172,86,193,82,155,109,182,181,234,186,189,108,207,91,267,	0,11379,11657,15716,20961,23856,25469,27712,29028,30408,32510,33052,34204,37396,38255,42457,
#Partially deleted in new
chr3	149129637	149154135	chr3:149129637-149154135	0	+	149129637	149129637	8553170	7	816,495,172,86,193,82,642,	0,10366,11379,11657,15716,20961,23856,
#Deleted in new
chr3	149129638	149130451	chr3:149129638-149130451	0	+	149129638	149129638	8553170	2	302,254,	0,559,
#Partially deleted in new
chr3	149129690	149154109	chr3:149129690-149154109	0	+	149129690	149129690	8553170	7	250,495,172,86,193,82,616,	0,10313,11326,11604,15663,20908,23803,
#Partially deleted in new
chr3	149160045	149172961	chr3:149160045-149172961	0	+	149160045	149167148	789624	8	234,186,189,108,176,95,103,867,	0,2102,2644,3796,7019,7843,10425,12049,
#Partially deleted in new
chr3	149162409	149221827	chr3:149162409-149221827	0	-	149166014	149221792	789624	18	466,105,140,217,107,129,140,208,151,212,153,140,172,255,174,213,248,181,	0,3536,15430,16005,17146,19595,21056,22829,25642,35957,37302,39692,43758,44953,46801,47757,50041,59237,
#Partially deleted in new
chr3	149162416	149179621	chr3:149162416-149179621	0	-	149165958	149179621	789624	6	459,105,163,140,217,66,	0,3529,13833,15423,15998,17139,
#Deleted in new
chr3	149167214	149168467	chr3:149167214-149168467	0	+	149167214	149167214	8553170	2	26,575,	0,678,
#Partially deleted in new
chr3	149172498	149222055	chr3:149172498-149222055	3	-	149173713	149221792	789624	19	1232,163,140,217,107,129,140,208,213,151,212,153,140,172,255,174,213,248,409,	0,3751,5341,5916,7057,9506,10967,12740,14021,15553,25868,27213,29603,33669,34864,36712,37668,39952,49148,
#Partially deleted in new
chr3	149172498	149180133	chr3:149172498-149180133	0	-	149172498	149172498	8553170	5	1232,102,140,217,578,	0,3751,5341,5916,7057,
#Partially deleted in new
chr3	149173466	149209340	chr3:149173466-149209340	0	-	149173713	149209340	789624	16	264,175,140,217,107,129,140,208,213,151,212,153,140,172,255,130,	0,2771,4373,4948,6089,8538,9999,11772,13053,14585,24900,26245,28635,32701,33896,35744,
#Deleted in new
chr3	149173483	149176714	chr3:149173483-149176714	0	-	149173483	149173483	8553170	2	247,465,	0,2766,
#Partially deleted in new
chr3	149175984	149177907	chr3:149175984-149177907	0	-	149175984	149175984	8553170	2	428,68,	0,1855,
#Partially deleted in new
chr3	149176362	149179738	chr3:149176362-149179738	0	-	149176362	149176362	8553170	4	50,140,217,183,	0,1477,2052,3193,
#Partially deleted in new
chr3	149177784	149221824	chr3:149177784-149221824	0	-	149177784	149177784	8553170	17	195,217,107,129,140,208,213,151,212,153,140,172,255,174,213,248,178,	0,630,1771,4220,5681,7454,8735,10267,20582,21927,24317,28383,29578,31426,32382,34666,43862,
#Partially deleted in new
chr3	149185162	149188096	chr3:149185162-149188096	0	-	149185162	149185162	8553170	3	284,213,45,	0,1357,2889,
#Partially deleted in new
chr3	149185248	149198453	chr3:149185248-149198453	0	-	149185248	149185248	8553170	4	156,213,151,87,	0,1271,2803,13118,
#Partially deleted in new
chr3	149186065	149207623	chr3:149186065-149207623	0	-	149186065	149186065	8553170	7	667,151,212,153,140,172,261,	0,1986,12301,13646,16036,20102,21297,
#Partially deleted in new
chr3	149187918	149199821	chr3:149187918-149199821	0	-	149187918	149187918	8553170	3	284,212,110,	0,10448,11793,
#Partially deleted in new
chr3	149188063	149200031	chr3:149188063-149200031	0	-	149188063	149188063	8553170	3	139,212,320,	0,10303,11648,
#Partially deleted in new
chr3	149210357	149221827	chr3:149210357-149221827	0	-	149210357	149221792	789624	4	22,248,120,181,	0,2093,7508,11289,
#Partially deleted in new
chr3	149229355	149241389	chr3:149229355-149241389	5	-	149229355	149229355	16724991	3	332,163,28,	0,1383,12006,
#Partially deleted in new
chr3	149229430	149276664	chr3:149229430-149276664	7	-	149229430	149229430	16724991	20	257,163,140,202,107,129,140,211,213,151,212,141,132,170,17,243,171,213,240,155,	0,1308,11931,14823,16232,17937,19591,20528,23415,24687,26499,26966,28027,37435,39654,40389,41319,44072,46032,47079,
#Partially deleted in new
chr3	149229444	149241439	chr3:149229444-149241439	4	-	149229444	149229444	16724991	2	243,78,	0,11917,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	149275684	149291800	chr3:149275684-149291800	5	-	149275684	149275684	16724991	6	18,114,190,67,121,74,	0,825,1027,1651,12800,16042,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	149284781	149333653	chr3:149284781-149333653	3	+	149284781	149284781	8553170	2	401,150,	0,48722,
#Partially deleted in new
chr3	149318497	149333761	chr3:149318497-149333761	3	-	149321477	149333382	789624	6	2995,181,143,90,194,249,	0,3758,6382,11832,14708,15015,
#Partially deleted in new
chr3	149321276	149333482	chr3:149321276-149333482	1	-	149321477	149333382	789624	5	216,181,143,90,277,	0,979,3603,9053,11929,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	149322367	149334414	chr3:149322367-149334414	0	-	149322367	149333382	789624	6	69,143,90,194,97,69,	0,2512,7962,10838,11145,11978,
#Partially deleted in new
chr3	149324803	149333635	chr3:149324803-149333635	0	-	149324803	149324803	8553170	4	219,90,194,123,	0,5526,8402,8709,
#Deleted in new
chr3	149329927	149333328	chr3:149329927-149333328	0	-	149329927	149329927	8553170	2	492,123,	0,3278,
#Deleted in new
chr3	149357168	149357545	chr3:149357168-149357545	7	-	149357168	149357168	16724991	1	377,	0,
#Partially deleted in new
chr3	149369021	149377865	chr3:149369021-149377865	3	-	149369865	149377547	789624	5	859,181,146,90,495,	0,2665,6421,6658,8349,
#Partially deleted in new
chr3	149369022	149375712	chr3:149369022-149375712	1	-	149371659	149375588	789624	2	2845,270,	0,6420,
#Partially deleted in new
chr3	149369497	149377692	chr3:149369497-149377692	0	-	149371828	149377547	789624	4	383,181,90,322,	0,2189,6182,7873,
#Partially deleted in new
chr3	149371771	149377649	chr3:149371771-149377649	0	-	149375634	149377547	789624	3	96,327,279,	0,3671,5599,
#Partially deleted in new
chr3	149377777	149386583	chr3:149377777-149386583	3	+	149377777	149377777	789624	2	538,216,	0,8590,
#Partially deleted in new
chr3	149378218	149386581	chr3:149378218-149386581	1	+	149378218	149378218	789624	3	97,177,214,	0,6774,8149,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	149384178	149385800	chr3:149384178-149385800	3	-	149384178	149384178	8553170	2	825,176,	0,1446,
#Partially deleted in new
chr3	149433043	149433274	chr3:149433043-149433274	7	-	149433043	149433043	16724991	1	231,	0,
#Deleted in new
chr3	149462181	149464830	chr3:149462181-149464830	7	-	149462181	149462181	16724991	2	398,622,	0,2027,
#Deleted in new
chr3	149463778	149464114	chr3:149463778-149464114	7	-	149463778	149463778	16724991	1	336,	0,
#Deleted in new
chr3	149464838	149465201	chr3:149464838-149465201	7	-	149464838	149464838	16724991	1	363,	0,
#Partially deleted in new
chr3	149473973	149503281	chr3:149473973-149503281	3	+	149474877	149502693	789624	5	1078,90,137,190,606,	0,1849,13645,24748,28702,
#Partially deleted in new
chr3	149474698	149487687	chr3:149474698-149487687	0	+	149474877	149487687	789624	2	353,69,	0,12920,
#Partially deleted in new
chr3	149475783	149498911	chr3:149475783-149498911	0	+	149475783	149475783	8553170	3	129,137,190,	0,11835,22938,
#Deleted in new
chr3	149494659	149495995	chr3:149494659-149495995	7	+	149494659	149494659	16724991	1	1336,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	149517234	149703273	chr3:149517234-149703273	3	-	149520804	149657306	0	8	3755,113,134,203,137,434,104,150,	0,8778,10601,25100,55629,139641,152553,185889,
#Partially deleted in new
chr3	149520244	149658101	chr3:149520244-149658101	1	-	149520804	149657306	0	7	745,113,134,203,137,434,337,	0,5768,7591,22090,52619,136631,137520,
#Partially deleted in new
chr3	149520609	149658025	chr3:149520609-149658025	1	-	149520804	149657306	0	7	380,113,134,203,137,431,205,	0,5403,7226,21725,52254,136266,137211,
#Partially deleted in new
chr3	149520698	149541060	chr3:149520698-149541060	0	-	149527887	149541060	789624	4	291,113,134,46,	0,5314,7137,20316,
#Partially deleted in new
chr3	149520721	149540266	chr3:149520721-149540266	0	-	149527931	149540266	789624	4	268,113,134,51,	0,5291,7114,19494,
#Partially deleted in new
chr3	149520840	149576252	chr3:149520840-149576252	0	-	149520840	149576038	789624	6	149,113,134,203,137,219,	0,5172,6995,21494,52023,55193,
#Deleted in new
chr3	149525630	149525726	chr3:149525630-149525726	3	+	149525630	149525630	8553170	1	96,	0,
#Partially deleted in new
chr3	149525804	149542439	chr3:149525804-149542439	0	-	149525804	149525804	8553170	3	321,134,105,	0,2031,16530,
#Partially deleted in new
chr3	149572863	149657435	chr3:149572863-149657435	0	-	149572863	149657306	789624	2	137,560,	0,84012,
#Deleted in new
chr3	149656890	149657767	chr3:149656890-149657767	0	-	149656890	149657306	789624	2	419,84,	0,793,
#Partially deleted in new
chr3	149656977	149670909	chr3:149656977-149670909	0	-	149656977	149657306	789624	3	332,104,142,	0,12810,13790,
#Deleted in new
chr3	149657019	149658311	chr3:149657019-149658311	1	+	149657019	149657019	8553170	2	303,672,	0,620,
#Deleted in new
chr3	149657051	149657806	chr3:149657051-149657806	0	+	149657051	149657051	8553170	2	271,197,	0,558,
#Deleted in new
chr3	149657243	149658041	chr3:149657243-149658041	0	-	149657243	149657306	789624	2	66,538,	0,260,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	149658209	149661364	chr3:149658209-149661364	3	+	149658209	149658209	789624	3	499,942,259,	0,1168,2896,
#Partially deleted in new
chr3	149701604	149736714	chr3:149701604-149736714	0	-	149701604	149701604	8553170	7	1354,205,125,136,87,73,163,	0,1519,15837,22475,23097,23867,34947,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	149738469	149752499	chr3:149738469-149752499	3	-	149741520	149752444	789624	5	3249,174,83,78,122,	0,12208,12933,13740,13908,
#Partially deleted in new
chr3	149741389	149752472	chr3:149741389-149752472	0	-	149750376	149752444	789624	6	329,126,174,83,78,95,	0,8867,9288,10013,10820,10988,
#Partially deleted in new
chr3	149741425	149752398	chr3:149741425-149752398	0	-	149741425	149741425	8553170	4	293,174,83,189,	0,9252,9977,10784,
#Partially deleted in new
chr3	149741574	149752450	chr3:149741574-149752450	0	-	149750793	149752444	789624	5	144,174,163,78,73,	0,9103,9748,10635,10803,
#Deleted in new
chr3	149750502	149752495	chr3:149750502-149752495	0	-	149750502	149750502	8553170	4	349,83,78,118,	0,900,1707,1875,
#Deleted in new
chr3	149750786	149752058	chr3:149750786-149752058	0	-	149750786	149750786	8553170	2	65,656,	0,616,
#Deleted in new
chr3	149751810	149752489	chr3:149751810-149752489	0	-	149751810	149751810	8553170	2	477,112,	0,567,
#Partially deleted in new
chr3	149761099	149792766	chr3:149761099-149792766	1	-	149761483	149792366	789624	6	514,939,115,217,144,490,	0,6057,9460,19139,29681,31177,
#Partially deleted in new
chr3	149761438	149792823	chr3:149761438-149792823	0	-	149790866	149792366	789624	6	175,939,115,135,116,547,	0,5718,9121,18882,29342,30838,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	149766627	149792554	chr3:149766627-149792554	3	-	149767152	149792366	789624	5	1468,115,217,144,278,	0,3932,13611,24153,25649,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	149778353	149790927	chr3:149778353-149790927	0	-	149778353	149778353	8553170	2	2102,147,	0,12427,
#Partially deleted in new
chr3	149778510	149780440	chr3:149778510-149780440	0	-	149778510	149778510	8553170	3	202,91,120,	0,1390,1810,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	149779008	149779108	chr3:149779008-149779108	3	-	149779008	149779008	8553170	1	100,	0,
#Partially deleted in new
chr3	149780130	149783271	chr3:149780130-149783271	0	-	149780130	149780130	8553170	2	325,185,	0,2956,
#Partially deleted in new
chr3	149780275	149968385	chr3:149780275-149968385	0	-	149780275	149780275	8553170	4	180,122,101,28,	0,65720,113531,188082,
#Partially deleted in new
chr3	149783373	149792322	chr3:149783373-149792322	0	-	149783373	149783373	8553170	3	520,144,46,	0,7407,8903,
#Partially deleted in new
chr3	149812707	149962139	chr3:149812707-149962139	3	+	149846026	149961104	789624	10	646,130,81,126,88,91,106,94,81,1400,	0,33303,39808,59321,82765,89364,99270,108426,147348,148032,
#Partially deleted in new
chr3	149812769	149962122	chr3:149812769-149962122	1	+	149846026	149961104	789624	11	584,102,130,81,126,88,91,106,94,81,1383,	0,1155,33241,39746,59259,82703,89302,99208,108364,147286,147970,
#Partially deleted in new
chr3	149812832	149872074	chr3:149812832-149872074	0	+	149846026	149872074	789624	5	342,102,130,81,46,	0,1092,33178,39683,59196,
#Partially deleted in new
chr3	149813048	149872049	chr3:149813048-149872049	0	+	149846026	149872049	789624	5	305,56,130,81,21,	0,9469,32962,39467,58980,
#Partially deleted in new
chr3	149813203	149961016	chr3:149813203-149961016	0	+	149895518	149961016	789624	9	150,81,126,98,91,106,94,81,277,	0,39312,58825,82269,88868,98774,107930,146852,147536,
#Partially deleted in new
chr3	149813214	149960765	chr3:149813214-149960765	0	+	149895518	149960765	789624	8	139,126,98,91,106,94,81,26,	0,58814,82258,88857,98763,107919,146841,147525,
#Partially deleted in new
chr3	149813227	149960833	chr3:149813227-149960833	0	+	149846026	149902075	789624	10	126,130,81,126,98,91,106,94,81,94,	0,32783,39288,58801,82245,88844,98750,107906,146828,147512,
#Partially deleted in new
chr3	149813264	149960750	chr3:149813264-149960750	0	+	149895518	149902083	789624	9	89,81,126,88,91,106,94,81,11,	0,39251,58764,82208,88807,98713,107869,146791,147475,
#Partially deleted in new
chr3	149813819	149895498	chr3:149813819-149895498	0	+	149846026	149895498	789624	5	207,130,81,126,26,	0,32191,38696,58209,81653,
#Partially deleted in new
chr3	149813836	149902159	chr3:149813836-149902159	0	+	149846026	149902159	789624	6	495,130,81,126,88,88,	0,32174,38679,58192,81636,88235,
#Partially deleted in new
chr3	149817241	149902152	chr3:149817241-149902152	0	+	149846026	149902152	789624	6	80,130,81,126,88,81,	0,28769,35274,54787,78231,84830,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	149845786	149851657	chr3:149845786-149851657	0	-	149845786	149845786	8553170	2	331,486,	0,5385,
#Partially deleted in new
chr3	149846019	149921184	chr3:149846019-149921184	0	+	149846026	149921184	789624	6	121,81,126,98,106,51,	0,6496,26009,49453,65958,75114,
#Partially deleted in new
chr3	149872072	149962126	chr3:149872072-149962126	1	+	149895518	149961104	789624	7	82,98,91,106,94,81,1387,	0,23400,29999,39905,49061,87983,88667,
#Partially deleted in new
chr3	149895239	149961011	chr3:149895239-149961011	0	+	149895518	149961011	789624	7	35,98,91,106,94,81,272,	0,233,6832,16738,25894,64816,65500,
#Partially deleted in new
chr3	149911992	149961374	chr3:149911992-149961374	0	+	149911992	149961104	789624	3	91,94,635,	0,9141,48747,
#Deleted in new
chr3	149917341	149917449	chr3:149917341-149917449	3	-	149917341	149917341	8553170	1	108,	0,
#Partially deleted in new
chr3	149938996	149939799	chr3:149938996-149939799	7	-	149938996	149938996	16724991	1	803,	0,
#Partially deleted in new
chr3	149959956	149961374	chr3:149959956-149961374	0	+	149959956	149959956	8553170	2	180,635,	0,783,
#Deleted in new
chr3	149964903	149971109	chr3:149964903-149971109	3	-	149966488	149970856	0	3	1683,193,385,	0,3454,5821,
#Deleted in new
chr3	149964903	149970950	chr3:149964903-149970950	1	-	149966166	149970856	0	3	1361,193,226,	0,3454,5821,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	149964903	150022799	chr3:149964903-150022799	1	-	149966488	149968535	8553170	4	1683,193,164,285,	0,3454,56051,57611,
#Deleted in new
chr3	149964912	149970922	chr3:149964912-149970922	1	-	149965190	149970856	789624	4	435,85,193,198,	0,1267,3445,5812,
#Deleted in new
chr3	149964934	149970715	chr3:149964934-149970715	1	-	149966166	149968535	789624	3	1330,193,97,	0,3423,5684,
#Deleted in new
chr3	149965688	149970904	chr3:149965688-149970904	0	-	149968537	149970856	789624	3	576,186,180,	0,2669,5036,
#Deleted in new
chr3	149965712	149970898	chr3:149965712-149970898	0	-	149968489	149970856	789624	3	552,168,174,	0,2645,5012,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	149965856	150022811	chr3:149965856-150022811	1	-	149966166	149968535	789624	3	408,193,192,	0,2501,56763,
#Deleted in new
chr3	149966052	149968905	chr3:149966052-149968905	0	-	149966052	149966052	8553170	2	212,552,	0,2301,
#Deleted in new
chr3	149966077	149970925	chr3:149966077-149970925	1	-	149966488	149970856	789624	3	509,148,201,	0,2325,4647,
#Partially deleted in new
chr3	149966160	150050788	chr3:149966160-150050788	1	-	149966488	149968535	789624	3	426,193,124,	0,2197,84504,
#Deleted in new
chr3	149966250	149970882	chr3:149966250-149970882	0	-	149968489	149970856	789624	3	336,168,158,	0,2107,4474,
#Deleted in new
chr3	149966259	149970735	chr3:149966259-149970735	1	-	149966488	149968535	789624	3	327,193,117,	0,2098,4359,
#Deleted in new
chr3	149966267	149970401	chr3:149966267-149970401	1	-	149966488	149968535	789624	3	319,193,48,	0,2090,4086,
#Deleted in new
chr3	149966284	149971213	chr3:149966284-149971213	1	-	149966488	149968535	789624	3	302,193,61,	0,2073,4868,
#Deleted in new
chr3	149966315	149971223	chr3:149966315-149971223	1	-	149966488	149968535	789624	3	271,193,172,	0,2042,4736,
#Deleted in new
chr3	149968117	149970904	chr3:149968117-149970904	1	-	149968537	149970856	789624	2	426,180,	0,2607,
#Deleted in new
chr3	149968153	149970940	chr3:149968153-149970940	1	-	149968349	149970856	789624	2	397,216,	0,2571,
#Deleted in new
chr3	149982180	149983308	chr3:149982180-149983308	7	-	149982180	149982180	16724991	1	1128,	0,
#Deleted in new
chr3	149984394	149984797	chr3:149984394-149984797	7	+	149984394	149984394	16724991	1	403,	0,
#Deleted in new
chr3	149999644	150000690	chr3:149999644-150000690	7	+	149999644	149999644	16724991	1	1046,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	150039213	150213614	chr3:150039213-150213614	0	+	150039213	150039213	8553170	3	46,93,233,	0,85724,174168,
#Deleted in new
chr3	150050728	150051456	chr3:150050728-150051456	7	+	150050728	150050728	16724991	1	728,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	150077493	150080117	chr3:150077493-150080117	3	-	150077493	150077493	8553170	2	1888,79,	0,2545,
#Partially deleted in new
chr3	150096442	150150784	chr3:150096442-150150784	1	+	150096442	150096442	789624	3	155,93,274,	0,28495,54068,
#Deleted in new
chr3	150150537	150150944	chr3:150150537-150150944	7	+	150150537	150150537	16724991	1	407,	0,
#Partially deleted in new
chr3	150202173	150225190	chr3:150202173-150225190	3	-	150202173	150202173	8553170	6	175,82,45,108,80,116,	0,1024,16157,22063,22747,22901,
#Deleted in new
chr3	150238518	150240203	chr3:150238518-150240203	0	+	150238518	150238518	789624	3	84,64,324,	0,416,1361,
#Deleted in new
chr3	150238699	150240209	chr3:150238699-150240209	3	+	150238699	150238699	789624	3	131,64,330,	0,235,1180,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	150241776	150241860	chr3:150241776-150241860	3	+	150241776	150241776	8553170	1	84,	0,
#Partially deleted in new
chr3	150265411	150287373	chr3:150265411-150287373	3	-	150265411	150265411	8553170	3	248,57,30,	0,1315,21932,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	150408334	150466431	chr3:150408334-150466431	3	+	150409350	150458636	789624	4	2974,72,52,8056,	0,14714,48741,50041,
#Partially deleted in new
chr3	150410968	150458861	chr3:150410968-150458861	0	+	150410968	150458385	789624	2	340,486,	0,47407,
#Partially deleted in new
chr3	150411008	150460116	chr3:150411008-150460116	0	+	150411008	150458636	789624	3	300,52,1741,	0,46067,47367,
#Partially deleted in new
chr3	150411178	150458679	chr3:150411178-150458679	0	+	150411178	150438240	789624	5	130,72,157,52,304,	0,11870,27019,45897,47197,
#Deleted in new
chr3	150423038	150423451	chr3:150423038-150423451	0	+	150423038	150423038	8553170	2	82,230,	0,183,
#Partially deleted in new
chr3	150456950	150459128	chr3:150456950-150459128	0	+	150456950	150456950	8553170	2	177,753,	0,1425,
#Partially deleted in new
chr3	150541993	150546641	chr3:150541993-150546641	1	-	150544457	150546135	789624	3	2505,76,590,	0,3709,4058,
#Partially deleted in new
chr3	150541997	150603174	chr3:150541997-150603174	3	-	150544457	150546135	789624	4	2501,76,1126,231,	0,3705,4054,60946,
#Partially deleted in new
chr3	150544291	150546501	chr3:150544291-150546501	1	-	150544414	150546135	789624	2	207,450,	0,1760,
#Partially deleted in new
chr3	150545396	150546499	chr3:150545396-150546499	1	-	150545625	150546135	789624	2	382,448,	0,655,
#Partially deleted in new
chr3	150546677	150558729	chr3:150546677-150558729	0	+	150546677	150546677	8553170	3	153,70,342,	0,5678,11710,
#Partially deleted in new
chr3	150546684	150584023	chr3:150546684-150584023	1	+	150546802	150583911	789624	13	146,70,119,100,83,74,145,117,572,114,129,66,178,	0,5671,15857,16830,17614,21008,21217,21491,25273,28964,34933,36515,37161,
#Partially deleted in new
chr3	150546693	150584242	chr3:150546693-150584242	3	+	150546802	150583911	789624	14	137,70,75,119,100,83,74,145,117,572,114,129,66,397,	0,5662,11694,15848,16821,17605,20999,21208,21482,25264,28955,34924,36506,37152,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	150546724	150552883	chr3:150546724-150552883	0	+	150546724	150546724	8553170	2	106,528,	0,5631,
#Partially deleted in new
chr3	150546766	150568274	chr3:150546766-150568274	0	+	150546802	150563521	789624	8	64,70,75,100,83,74,145,99,	0,5589,11621,16748,17532,20926,21135,21409,
#Partially deleted in new
chr3	150546785	150564899	chr3:150546785-150564899	0	+	150546785	150546785	8553170	6	45,70,75,119,100,601,	0,5570,11602,15756,16729,17513,
#Partially deleted in new
chr3	150546786	150584115	chr3:150546786-150584115	1	+	150546802	150583911	789624	12	44,70,75,119,74,145,117,572,114,129,66,270,	0,5569,11601,15755,20906,21115,21389,25171,28862,34831,36413,37059,
#Partially deleted in new
chr3	150546787	150568026	chr3:150546787-150568026	0	+	150546802	150568026	789624	9	43,70,75,119,100,83,36,74,125,	0,5568,11600,15754,16727,17511,18403,20905,21114,
#Partially deleted in new
chr3	150546789	150562908	chr3:150546789-150562908	0	+	150546789	150546789	8553170	4	41,70,75,367,	0,5566,11598,15752,
#Partially deleted in new
chr3	150546789	150603170	chr3:150546789-150603170	0	-	150546789	150546789	8553170	3	283,206,227,	0,20111,56154,
#Partially deleted in new
chr3	150546793	150584242	chr3:150546793-150584242	1	+	150546802	150583911	789624	14	37,70,75,104,100,83,74,145,117,572,114,129,66,397,	0,5562,11594,15763,16721,17505,20899,21108,21382,25164,28855,34824,36406,37052,
#Partially deleted in new
chr3	150546813	150572061	chr3:150546813-150572061	0	+	150546813	150558423	789624	11	17,70,75,119,100,83,74,28,30,117,104,	0,5542,11574,15728,16701,17485,20879,21088,21203,21362,25144,
#Partially deleted in new
chr3	150552353	150584242	chr3:150552353-150584242	0	+	150552353	150567927	789624	13	72,75,119,100,83,28,34,117,572,114,129,66,397,	0,6034,10188,11161,11945,15548,15659,15822,19604,23295,29264,30846,31492,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	150565795	150603228	chr3:150565795-150603228	0	-	150565795	150565795	8553170	2	1311,285,	0,37148,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	150566384	150583155	chr3:150566384-150583155	0	-	150566384	150566384	8553170	2	722,39,	0,16732,
#Deleted in new
chr3	150567398	150568219	chr3:150567398-150568219	0	+	150567398	150567398	8553170	3	368,145,44,	0,503,777,
#Partially deleted in new
chr3	150568031	150584234	chr3:150568031-150584234	0	+	150568031	150583911	789624	6	15,117,572,114,66,389,	0,144,3926,7617,15168,15814,
#Partially deleted in new
chr3	150572495	150583903	chr3:150572495-150583903	0	+	150572495	150572495	8553170	4	34,129,66,58,	0,9122,10704,11350,
#Partially deleted in new
chr3	150602874	150627831	chr3:150602874-150627831	1	+	150622421	150627134	789624	6	130,111,127,88,154,173,	0,19510,20168,21937,24135,24784,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	150603278	150630445	chr3:150603278-150630445	1	+	150603362	150627134	789624	7	221,11,100,127,88,154,2787,	0,11294,19117,19764,21533,23731,24380,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	150603287	150630435	chr3:150603287-150630435	3	+	150603362	150627134	789624	6	212,111,127,88,154,2777,	0,19097,19755,21524,23722,24371,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	150603290	150627693	chr3:150603290-150627693	1	+	150622421	150627134	789624	7	209,220,111,127,88,154,35,	0,15418,19094,19752,21521,23719,24368,
#Partially deleted in new
chr3	150603335	150627905	chr3:150603335-150627905	1	+	150622421	150627134	789624	6	351,111,127,88,154,247,	0,19049,19707,21476,23674,24323,
#Partially deleted in new
chr3	150611261	150611877	chr3:150611261-150611877	7	-	150611261	150611261	16724991	1	616,	0,
#Deleted in new
chr3	150626910	150627990	chr3:150626910-150627990	0	+	150626910	150626910	8553170	2	253,332,	0,748,
#Partially deleted in new
chr3	150659884	150703951	chr3:150659884-150703951	3	-	150659891	150703898	789624	14	271,229,156,86,146,71,158,99,117,56,57,92,58,456,	0,6902,9411,14071,18524,20583,20888,22333,25857,26081,26413,38906,42236,43611,
#Partially deleted in new
chr3	150659884	150703958	chr3:150659884-150703958	1	-	150659891	150702143	789624	14	271,229,156,86,146,71,158,99,117,56,57,92,58,159,	0,6902,9411,14071,18524,20583,20888,22333,25857,26081,26413,38906,42236,43915,
#Partially deleted in new
chr3	150659884	150682319	chr3:150659884-150682319	0	-	150659884	150659884	8553170	8	271,229,156,86,146,71,158,102,	0,6902,9411,14071,18524,20583,20888,22333,
#Partially deleted in new
chr3	150686337	150703932	chr3:150686337-150703932	0	-	150686337	150703898	789624	5	17,92,58,163,196,	0,12453,15783,17158,17399,
#Partially deleted in new
chr3	150698817	150703971	chr3:150698817-150703971	0	-	150698817	150703898	789624	4	65,58,163,193,	0,3303,4678,4961,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	150703563	150719988	chr3:150703563-150719988	0	+	150703563	150703563	789624	3	104,78,120,	0,4368,16305,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	150704042	150720146	chr3:150704042-150720146	3	+	150704042	150704042	789624	4	20,245,78,278,	0,2884,3889,15826,
#Partially deleted in new
chr3	150719996	150720836	chr3:150719996-150720836	7	-	150719996	150719996	16724991	2	95,381,	0,459,
#Partially deleted in new
chr3	150741126	150763377	chr3:150741126-150763377	3	-	150742140	150762849	0	2	1572,945,	0,21306,
#Partially deleted in new
chr3	150742487	150763431	chr3:150742487-150763431	0	-	150742487	150762471	789624	3	211,138,78,	0,19945,20866,
#Partially deleted in new
chr3	150761936	150762538	chr3:150761936-150762538	3	+	150761936	150761936	8553170	2	239,202,	0,400,
#Partially deleted in new
chr3	150762455	150763477	chr3:150762455-150763477	0	-	150762455	150762455	8553170	2	115,337,	0,685,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	150852483	151080726	chr3:150852483-151080726	3	+	150852483	150852483	8553170	5	123,78,64,120,1838,	0,210442,212529,213826,226405,
#Partially deleted in new
chr3	150871044	150905439	chr3:150871044-150905439	3	-	150871044	150905439	789624	12	143,181,162,73,71,66,166,92,120,168,28,113,	0,2142,11852,12655,14323,19275,19893,22279,23141,32204,34017,34282,
#Partially deleted in new
chr3	150882996	150941743	chr3:150882996-150941743	3	-	150907416	150941743	789624	11	62,73,71,66,166,120,168,28,171,102,162,	0,703,2371,7323,7941,11189,20252,22065,22330,24374,58585,
#Partially deleted in new
chr3	150883698	150941685	chr3:150883698-150941685	0	-	150894261	150941685	789624	7	74,71,66,166,92,120,104,	0,1669,6621,7239,9625,10487,57883,
#Partially deleted in new
chr3	150890635	151038818	chr3:150890635-151038818	3	+	150890635	150890635	8553170	3	235,56,274,	0,110938,147909,
#Partially deleted in new
chr3	150890937	150941743	chr3:150890937-150941743	0	-	150894261	150941743	789624	3	213,120,162,	0,3248,50644,
#Partially deleted in new
chr3	150901153	150903394	chr3:150901153-150903394	0	-	150901153	150901153	8553170	2	303,146,	0,2095,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	150926162	150944236	chr3:150926162-150944236	1	-	150926851	150943844	789624	4	710,137,180,417,	0,1902,15419,17657,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	150926566	150972999	chr3:150926566-150972999	3	-	150927935	150972708	789624	3	1635,180,544,	0,15015,45889,
#Partially deleted in new
chr3	150927935	150972708	chr3:150927935-150972708	1	-	150927935	150972708	789624	4	266,39,180,253,	0,12545,13646,44520,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	150928180	150944236	chr3:150928180-150944236	0	-	150928180	150928180	8553170	4	21,180,86,417,	0,13401,14373,15639,
#Partially deleted in new
chr3	150940480	150972549	chr3:150940480-150972549	0	-	150945626	150972549	789624	4	39,180,151,94,	0,1101,5048,31975,
#Partially deleted in new
chr3	150941414	150972714	chr3:150941414-150972714	0	-	150941414	150941414	8553170	2	347,259,	0,31041,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	150972677	151079830	chr3:150972677-151079830	1	+	150972677	150972677	789624	6	416,361,64,120,142,942,	0,89965,92335,93632,102433,106211,
#Deleted in new
chr3	151079505	151079584	chr3:151079505-151079584	3	+	151079505	151079505	8553170	1	79,	0,
#Partially deleted in new
chr3	151085696	151122931	chr3:151085696-151122931	0	+	151085696	151085696	8553170	3	240,105,149,	0,30641,37086,
#Partially deleted in new
chr3	151086393	151193745	chr3:151086393-151193745	1	+	151086926	151193687	789624	15	632,105,192,160,170,111,270,150,100,137,132,127,215,105,256,	0,29944,36389,41431,69767,72295,73438,77499,79026,79452,98936,101960,104323,106156,107096,
#Partially deleted in new
chr3	151086393	151193745	chr3:151086393-151193745	1	+	151086926	151193687	789624	14	632,105,192,160,170,111,270,150,100,137,132,127,215,256,	0,29944,36389,41431,69767,72295,73438,77499,79026,79452,98936,101960,104323,107096,
#Partially deleted in new
chr3	151086888	151437072	chr3:151086888-151437072	3	+	151086926	151432804	789624	43	137,105,192,160,170,111,270,150,100,137,132,127,215,177,148,119,144,164,132,228,142,121,102,114,200,189,75,188,162,112,90,110,136,162,363,157,212,90,230,157,111,82,4321,	0,29449,35894,40936,69272,71800,72943,77004,78531,78957,98441,101465,103828,106601,263170,268232,269007,270324,273585,278090,278961,280757,281261,282547,285678,289137,289911,290102,291123,293224,295767,296890,297194,298141,300921,303090,307767,322354,324389,326250,329423,343410,345863,
#Partially deleted in new
chr3	151086893	151433742	chr3:151086893-151433742	1	+	151086926	151432804	789624	37	132,105,192,160,170,111,100,137,132,127,215,177,148,119,144,164,132,228,142,121,102,114,200,189,75,188,162,112,90,110,136,162,363,157,212,82,991,	0,29444,35889,40931,69267,71795,78526,78952,98436,101460,103823,106596,263165,268227,269002,270319,273580,278085,278956,280752,281256,282542,285673,289132,289906,290097,291118,293219,295762,296885,297189,298136,300916,303085,307762,343405,345858,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	151188098	151188223	chr3:151188098-151188223	7	+	151188098	151188098	16724991	1	125,	0,
#Partially deleted in new
chr3	151190915	151337062	chr3:151190915-151337062	0	+	151190915	151336536	789624	3	16,177,556,	0,2574,145591,
#Partially deleted in new
chr3	151197831	151203192	chr3:151197831-151203192	3	-	151198426	151199386	789624	3	1608,89,89,	0,3077,5272,
#Deleted in new
chr3	151198426	151199386	chr3:151198426-151199386	1	-	151198426	151199386	789624	1	960,	0,
#Partially deleted in new
chr3	151199332	151203201	chr3:151199332-151203201	0	-	151199332	151199386	789624	2	107,98,	0,3771,
#Partially deleted in new
chr3	151212116	151278467	chr3:151212116-151278467	3	-	151213299	151214316	0	3	2224,108,181,	0,7418,66170,
#Partially deleted in new
chr3	151212918	151249114	chr3:151212918-151249114	1	-	151213299	151214316	0	3	1422,108,250,	0,6616,35946,
#Partially deleted in new
chr3	151214029	151278369	chr3:151214029-151278369	0	-	151214029	151214316	789624	4	311,108,52,83,	0,5505,47357,64257,
#Deleted in new
chr3	151269439	151270129	chr3:151269439-151270129	7	+	151269439	151269439	16724991	1	690,	0,
#Deleted in new
chr3	151294085	151295284	chr3:151294085-151295284	0	-	151294085	151294085	8553170	1	1199,	0,
#Partially deleted in new
chr3	151294102	151316952	chr3:151294102-151316952	3	-	151294168	151300100	789624	3	1109,132,367,	0,5964,22483,
#Partially deleted in new
chr3	151316419	151355213	chr3:151316419-151355213	0	+	151316419	151316419	8553170	3	327,148,93,	0,33639,38701,
#Deleted in new
chr3	151326311	151329548	chr3:151326311-151329548	3	-	151327990	151329528	0	2	2696,68,	0,3169,
#Partially deleted in new
chr3	151337379	151384812	chr3:151337379-151384812	3	-	151337816	151338845	0	3	1480,165,121,	0,3216,47312,
#Deleted in new
chr3	151338157	151340853	chr3:151338157-151340853	0	-	151338157	151338157	8553170	2	702,258,	0,2438,
#Partially deleted in new
chr3	151394666	151430304	chr3:151394666-151430304	0	+	151394666	151394666	8553170	3	201,111,6,	0,21645,35632,
#Partially deleted in new
chr3	151425383	151443150	chr3:151425383-151443150	0	-	151425646	151443150	789624	2	357,167,	0,17600,
#Deleted in new
chr3	151432709	151436922	chr3:151432709-151436922	0	-	151432709	151432709	8553170	2	97,124,	0,4089,
#Partially deleted in new
chr3	151433493	151458709	chr3:151433493-151458709	3	-	151436688	151458709	789624	6	5104,901,4347,391,130,194,	0,9490,11425,19890,23532,25022,
#Partially deleted in new
chr3	151436522	151440780	chr3:151436522-151440780	0	-	151436522	151436522	8553170	2	2075,53,	0,4205,
#Partially deleted in new
chr3	151436540	151440771	chr3:151436540-151440771	0	-	151436540	151436540	8553170	2	2057,197,	0,4034,
#Deleted in new
chr3	151475803	151476174	chr3:151475803-151476174	7	-	151475803	151475803	16724991	1	371,	0,
#Deleted in new
chr3	151499638	151499806	chr3:151499638-151499806	7	+	151499638	151499638	16724991	1	168,	0,
#Deleted in new
chr3	151565875	151565995	chr3:151565875-151565995	3	-	151565875	151565875	5263520	1	120,	0,
#Partially deleted in new
chr3	151637173	151657966	chr3:151637173-151657966	3	+	151637173	151637173	8553170	3	99,169,312,	0,5533,20481,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	151733915	151761339	chr3:151733915-151761339	0	+	151734035	151744116	789624	4	258,70,172,4348,	0,10177,11593,23076,
#Partially deleted in new
chr3	151733926	151757766	chr3:151733926-151757766	3	+	151734035	151757594	789624	5	247,223,70,172,775,	0,6719,10166,11582,23065,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	151751442	151928168	chr3:151751442-151928168	3	-	151751442	151751442	8553170	5	69,60,60,127,312,	0,3629,23163,166172,176414,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	151751470	151928175	chr3:151751470-151928175	0	-	151751470	151751470	789624	4	41,60,60,319,	0,3601,23135,176386,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	151759746	151762011	chr3:151759746-151762011	7	-	151759746	151759746	16724991	1	2265,	0,
#Partially deleted in new
chr3	151770427	151773952	chr3:151770427-151773952	5	+	151770427	151770427	16724991	2	184,523,	0,3002,
#Partially deleted in new
chr3	151770459	151784894	chr3:151770459-151784894	5	+	151770459	151770459	16724991	3	152,70,1063,	0,5235,13372,
#Partially deleted in new
chr3	151770473	151784421	chr3:151770473-151784421	5	+	151770473	151770473	16724991	5	138,223,70,172,590,	0,2956,5221,6330,13358,
#Partially deleted in new
chr3	151770477	151784417	chr3:151770477-151784417	6	+	151770477	151770477	16724991	2	134,586,	0,13354,
#Partially deleted in new
chr3	151770571	151776912	chr3:151770571-151776912	4	+	151770571	151770571	16724991	2	40,109,	0,6232,
#Partially deleted in new
chr3	151773478	151783909	chr3:151773478-151783909	4	+	151773478	151773478	16724991	3	174,70,78,	0,2216,10353,
#Partially deleted in new
chr3	151797046	151803925	chr3:151797046-151803925	5	+	151797046	151797046	16724991	2	133,220,	0,6659,
#Partially deleted in new
chr3	151797483	151808249	chr3:151797483-151808249	7	+	151797483	151797483	16724991	3	64,220,106,	0,6222,10660,
#Partially deleted in new
chr3	151814036	151828488	chr3:151814036-151828488	3	+	151814162	151828172	789624	5	264,223,70,172,913,	0,3329,6346,10626,13539,
#Partially deleted in new
chr3	151814072	151824860	chr3:151814072-151824860	1	+	151814162	151824846	789624	4	228,223,70,198,	0,3293,6310,10590,
#Partially deleted in new
chr3	151873642	151884619	chr3:151873642-151884619	3	+	151879892	151881548	789624	3	64,56,4061,	0,6209,6916,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	152118172	152151724	chr3:152118172-152151724	3	-	152118172	152118172	8553170	2	495,59,	0,33493,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	152243827	152300110	chr3:152243827-152300110	0	+	152243827	152243827	8553170	3	213,120,706,	0,493,55577,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	152262615	152269555	chr3:152262615-152269555	3	-	152262615	152262615	789624	2	6457,128,	0,6812,
#Partially deleted in new
chr3	152268039	152465779	chr3:152268039-152465779	3	+	152300193	152459327	0	10	1053,963,171,204,258,54,154,95,75,3395,	0,31365,146901,164677,177242,178664,179580,188227,191231,194345,
#Partially deleted in new
chr3	152268039	152465779	chr3:152268039-152465779	1	+	152300193	152459327	789624	11	1053,963,171,204,258,54,154,36,95,75,3395,	0,31365,146901,164677,177242,178664,179580,187502,188227,191231,194345,
#Deleted in new
chr3	152268183	152269546	chr3:152268183-152269546	0	-	152268183	152268183	8553170	2	889,108,	0,1255,
#Partially deleted in new
chr3	152268467	152465780	chr3:152268467-152465780	1	+	152300193	152459327	0	9	625,963,171,204,258,154,95,75,3396,	0,30937,146473,164249,176814,179152,187799,190803,193917,
#Partially deleted in new
chr3	152268905	152302449	chr3:152268905-152302449	0	+	152268905	152268905	8553170	3	187,963,531,	0,30499,33013,
#Partially deleted in new
chr3	152268919	152432917	chr3:152268919-152432917	0	+	152415042	152432917	789624	3	173,171,201,	0,146021,163797,
#Partially deleted in new
chr3	152268962	152465763	chr3:152268962-152465763	1	+	152300193	152459327	0	10	130,963,171,204,258,154,36,95,75,3379,	0,30442,145978,163754,176319,178657,186579,187304,190308,193422,
#Partially deleted in new
chr3	152269102	152415109	chr3:152269102-152415109	0	+	152335224	152415109	789624	3	305,120,169,	0,66008,145838,
#Partially deleted in new
chr3	152269448	152445474	chr3:152269448-152445474	0	+	152415042	152445474	789624	4	330,171,204,193,	0,145492,163268,175833,
#Deleted in new
chr3	152298981	152300227	chr3:152298981-152300227	0	+	152298981	152298981	8553170	2	273,823,	0,423,
#Partially deleted in new
chr3	152299404	152465779	chr3:152299404-152465779	1	+	152300193	152459327	0	8	963,171,204,258,95,64,75,3395,	0,115536,133312,145877,156862,158725,159866,162980,
#Partially deleted in new
chr3	152299404	152465779	chr3:152299404-152465779	1	+	152300193	152459302	0	8	963,171,204,258,154,36,75,3395,	0,115536,133312,145877,148215,156137,159866,162980,
#Partially deleted in new
chr3	152299404	152465763	chr3:152299404-152465763	1	+	152300193	152459302	789624	8	963,171,204,258,54,154,75,3379,	0,115536,133312,145877,147299,148215,159866,162980,
#Partially deleted in new
chr3	152299404	152465779	chr3:152299404-152465779	1	+	152300193	152459327	0	8	963,171,258,154,36,95,75,3395,	0,115536,145877,148215,156137,156862,159866,162980,
#Partially deleted in new
chr3	152299682	152465780	chr3:152299682-152465780	1	+	152300193	152459327	0	9	685,171,204,258,54,154,95,75,3396,	0,115258,133034,145599,147021,147937,156584,159588,162702,
#Partially deleted in new
chr3	152299682	152465203	chr3:152299682-152465203	1	+	152300193	152459327	0	7	685,171,258,154,95,75,2819,	0,115258,145599,147937,156584,159588,162702,
#Partially deleted in new
chr3	152300193	152459327	chr3:152300193-152459327	1	+	152300193	152459327	0	7	174,171,258,154,36,95,57,	0,114747,145088,147426,155348,156073,159077,
#Partially deleted in new
chr3	152300193	152459327	chr3:152300193-152459327	1	+	152300193	152459327	0	7	174,171,204,258,95,64,57,	0,114747,132523,145088,156073,157936,159077,
#Partially deleted in new
chr3	152300193	152459327	chr3:152300193-152459327	1	+	152300193	152459302	0	7	174,171,204,258,154,36,57,	0,114747,132523,145088,147426,155348,159077,
#Partially deleted in new
chr3	152300197	152459302	chr3:152300197-152459302	0	+	152300197	152459302	789624	6	170,171,204,258,154,32,	0,114743,132519,145084,147422,159073,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	152339694	152340990	chr3:152339694-152340990	7	-	152339694	152339694	16724991	1	1296,	0,
#Deleted in new
chr3	152340526	152340904	chr3:152340526-152340904	5	-	152340526	152340526	16724991	1	378,	0,
#Partially deleted in new
chr3	152415057	152455577	chr3:152415057-152455577	0	+	152415057	152415057	8553170	4	54,204,258,36,	0,17659,30224,40484,
#Partially deleted in new
chr3	152415057	152463159	chr3:152415057-152463159	0	+	152415057	152459302	789624	7	54,204,258,49,36,75,775,	0,17659,30224,32667,40484,44213,47327,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	152449271	152449384	chr3:152449271-152449384	3	+	152449271	152449271	8553170	1	113,	0,
#Partially deleted in new
chr3	152457690	152465780	chr3:152457690-152465780	0	+	152457690	152457690	8553170	2	1655,3396,	0,4694,
#Partially deleted in new
chr3	152457758	152496813	chr3:152457758-152496813	3	-	152457758	152457758	8553170	2	415,59,	0,38996,
#Deleted in new
chr3	152648145	152650447	chr3:152648145-152650447	3	+	152648145	152648145	8553170	2	399,88,	0,2214,
#Deleted in new
chr3	152800433	152800732	chr3:152800433-152800732	7	-	152800433	152800433	16724991	1	299,	0,
#Deleted in new
chr3	152834692	152841439	chr3:152834692-152841439	3	+	152835782	152836904	0	1	6747,	0,
#Deleted in new
chr3	153067277	153067551	chr3:153067277-153067551	7	+	153067277	153067277	16724991	1	274,	0,
#Deleted in new
chr3	153129073	153129640	chr3:153129073-153129640	7	-	153129073	153129073	16724991	1	567,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	153156510	153161775	chr3:153156510-153161775	3	-	153156510	153156510	8553170	2	193,130,	0,5135,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	153162269	153170620	chr3:153162269-153170620	3	+	153162693	153163245	0	1	8351,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	153199699	153200017	chr3:153199699-153200017	3	-	153199699	153199699	8553170	1	318,	0,
#Partially deleted in new
chr3	153357106	153374186	chr3:153357106-153374186	3	+	153357106	153357106	8553170	2	133,501,	0,16579,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	153376830	153377562	chr3:153376830-153377562	3	+	153376830	153376830	8553170	2	65,317,	0,415,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	153384933	153387368	chr3:153384933-153387368	1	-	153384933	153384933	8553170	2	457,1501,	0,934,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	153385108	153762526	chr3:153385108-153762526	3	-	153385108	153385108	8553170	7	282,149,121,100,83,53,24,	0,759,149434,219537,287066,345646,377394,
#Partially deleted in new
chr3	153431855	153443531	chr3:153431855-153443531	1	+	153431855	153431855	8553170	3	140,117,258,	0,8627,11418,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	153440858	153502693	chr3:153440858-153502693	3	+	153440858	153440858	8553170	5	111,95,132,168,291,	0,2415,43698,45156,61544,
#Partially deleted in new
chr3	153484494	153502697	chr3:153484494-153502697	1	+	153484494	153484494	8553170	3	194,91,295,	0,1520,17908,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	153607376	153607479	chr3:153607376-153607479	3	+	153607376	153607376	8553170	1	103,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	153881525	153940836	chr3:153881525-153940836	3	+	153881525	153881525	8553170	6	23,56,65,65,190,304,	0,831,38825,53470,55409,59007,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	154007366	154007502	chr3:154007366-154007502	3	-	154007366	154007366	8553170	1	136,	0,
#Deleted in new
chr3	154023834	154024298	chr3:154023834-154024298	7	+	154023834	154023834	16724991	1	464,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	154024400	154121210	chr3:154024400-154121210	3	-	154024400	154024400	789624	4	2242,100,117,139,	0,5876,84268,96671,
#Partially deleted in new
chr3	154026528	154121332	chr3:154026528-154121332	1	-	154026528	154026528	8553170	4	114,103,117,261,	0,3748,82140,94543,
#Partially deleted in new
chr3	154026542	154032884	chr3:154026542-154032884	0	-	154026542	154026542	8553170	3	100,103,275,	0,3734,6067,
#Partially deleted in new
chr3	154026543	154030364	chr3:154026543-154030364	0	-	154026543	154026543	8553170	3	99,157,88,	0,1862,3733,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	154026577	154039666	chr3:154026577-154039666	0	-	154026577	154026577	8553170	4	65,103,58,282,	0,3699,11019,12807,
#Partially deleted in new
chr3	154026577	154031519	chr3:154026577-154031519	0	-	154026577	154026577	8553170	2	65,1243,	0,3699,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	154026577	154110351	chr3:154026577-154110351	0	-	154026577	154026577	8553170	5	65,103,117,250,249,	0,3699,82091,82304,83525,
#Partially deleted in new
chr3	154026577	154085263	chr3:154026577-154085263	0	-	154026577	154026577	8553170	3	65,103,582,	0,3699,58104,
#Partially deleted in new
chr3	154026579	154029303	chr3:154026579-154029303	0	-	154026579	154026579	8553170	2	63,898,	0,1826,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	154121002	154257827	chr3:154121002-154257827	3	+	154121992	154255473	789624	15	233,1134,40,146,57,161,153,130,75,90,155,210,68,105,2497,	0,939,3407,8571,28386,31769,66682,70286,73641,96866,104853,119367,132113,133717,134328,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	154121359	154256575	chr3:154121359-154256575	1	+	154121992	154255473	789624	15	160,1134,40,146,57,161,153,130,75,90,155,210,68,105,1245,	0,582,3050,8214,28029,31412,66325,69929,73284,96509,104496,119010,131756,133360,133971,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	154121415	154256548	chr3:154121415-154256548	1	+	154121992	154254792	789624	15	104,1134,40,146,57,161,153,130,75,90,155,210,68,40,1218,	0,526,2994,8158,27973,31356,66269,69873,73228,96453,104440,118954,131700,133369,133915,
#Partially deleted in new
chr3	154121439	154257825	chr3:154121439-154257825	1	+	154121992	154256944	789624	5	80,1134,40,150,949,	0,502,2970,8134,135437,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	154225784	154257827	chr3:154225784-154257827	0	+	154225784	154225784	8553170	5	226,210,68,105,2497,	0,14585,27331,28935,29546,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr3	154272545	154324497	chr3:154272545-154324497	3	-	154276170	154324416	0	25	3811,153,121,91,100,84,87,174,99,118,144,65,56,88,103,141,82,167,75,80,171,39,235,125,324,	0,4201,5052,8033,8217,10642,12037,12268,16320,17163,20005,21202,22738,27292,28048,28441,30783,32260,32548,33670,37107,39090,42500,43493,51628,
#Partially deleted in new
chr3	154275667	154324460	chr3:154275667-154324460	1	-	154276170	154324416	0	24	689,153,121,91,100,84,174,99,118,144,65,56,88,103,141,82,167,75,80,171,39,235,125,287,	0,1079,1930,4911,5095,7520,9146,13198,14041,16883,18080,19616,24170,24926,25319,27661,29138,29426,30548,33985,35968,39378,40371,48506,
#Deleted in new
chr3	154276028	154277835	chr3:154276028-154277835	0	-	154276028	154276028	8553170	3	328,153,238,	0,718,1569,
#Partially deleted in new
chr3	154276170	154324416	chr3:154276170-154324416	1	-	154276170	154324416	0	25	186,153,121,91,100,84,87,174,99,118,144,65,14,88,103,141,82,167,75,80,171,39,235,125,243,	0,576,1427,4408,4592,7017,8412,8643,12695,13538,16380,17577,19113,23667,24423,24816,27158,28635,28923,30045,33482,35465,38875,39868,48003,
#Deleted in new
chr3	154276552	154277894	chr3:154276552-154277894	0	-	154276552	154276552	8553170	2	347,297,	0,1045,
#Partially deleted in new
chr3	154277624	154284987	chr3:154277624-154284987	0	-	154280654	154284987	789624	5	94,91,84,87,174,	0,2954,5563,6958,7189,
#Partially deleted in new
chr3	154277634	154319284	chr3:154277634-154319284	0	-	154277634	154316148	789624	23	84,91,100,84,87,174,99,118,144,65,56,88,103,141,82,167,75,80,171,39,235,125,204,	0,2944,3128,5553,6948,7179,11231,12074,14916,16113,17649,22203,22959,23352,25694,27171,27459,28581,32018,34001,37411,38404,41446,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	154278494	154283218	chr3:154278494-154283218	0	-	154278494	154278494	8553170	3	2175,100,31,	0,2268,4693,
#Partially deleted in new
chr3	154284652	154295327	chr3:154284652-154295327	0	-	154284652	154295327	789624	6	17,174,118,144,65,44,	0,161,5056,7898,9095,10631,
#Partially deleted in new
chr3	154284780	154292578	chr3:154284780-154292578	0	-	154284780	154284780	8553170	4	207,99,118,28,	0,4085,4928,7770,
#Deleted in new
chr3	154303343	154305337	chr3:154303343-154305337	0	-	154303343	154303343	8553170	3	67,167,244,	0,1462,1750,
#Partially deleted in new
chr3	154309795	154312248	chr3:154309795-154312248	0	-	154309795	154309795	8553170	2	28,613,	0,1840,
#Partially deleted in new
chr3	154314650	154324251	chr3:154314650-154324251	0	-	154314650	154314650	8553170	3	630,125,78,	0,1388,9523,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	154329715	154329819	chr3:154329715-154329819	3	+	154329715	154329715	8553170	1	104,	0,
#Deleted in new
chr3	154334808	154337047	chr3:154334808-154337047	3	-	154334808	154334808	8553170	1	2239,	0,
#Partially deleted in new
chr3	154337671	154429715	chr3:154337671-154429715	3	-	154337698	154429615	789624	4	600,449,193,1081,	0,83367,89844,90963,
#Deleted in new
chr3	154352135	154354799	chr3:154352135-154354799	7	-	154352135	154352135	16724991	2	2109,84,	0,2580,
#Partially deleted in new
chr3	154511534	154539309	chr3:154511534-154539309	3	-	154511534	154511534	8553170	2	235,44,	0,27731,
#Deleted in new
chr3	154651655	154652423	chr3:154651655-154652423	7	-	154651655	154651655	16724991	1	768,	0,
#Deleted in new
chr3	154657293	154657563	chr3:154657293-154657563	7	+	154657293	154657293	16724991	1	270,	0,
#Deleted in new
chr3	154676587	154677119	chr3:154676587-154677119	7	-	154676587	154676587	16724991	1	532,	0,
#Partially deleted in new
chr3	154827015	154861017	chr3:154827015-154861017	3	-	154827015	154827015	8553170	2	125,226,	0,33776,
#Partially deleted in new
chr3	154969282	154970223	chr3:154969282-154970223	3	-	154969282	154969282	8553170	2	400,121,	0,820,
#Partially deleted in new
chr3	155024123	155180849	chr3:155024123-155180849	3	+	155084167	155180459	0	23	201,170,36,162,81,96,119,66,135,102,137,94,129,99,81,104,59,120,134,66,96,77,490,	0,60034,60935,90870,92355,92540,92744,94622,113978,116067,117867,118113,119319,120235,123020,124426,136266,142778,144368,144608,147993,148412,156236,
#Partially deleted in new
chr3	155079646	155183708	chr3:155079646-155183708	1	+	155084167	155180459	0	23	110,170,36,162,81,96,119,66,135,102,137,94,129,99,81,104,59,120,134,66,96,77,3349,	0,4511,5412,35347,36832,37017,37221,39099,58455,60544,62344,62590,63796,64712,67497,68903,80743,87255,88845,89085,92470,92889,100713,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	155079646	155085729	chr3:155079646-155085729	0	+	155079646	155079646	8553170	3	110,170,671,	0,4511,5412,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	155079646	155089880	chr3:155079646-155089880	1	+	155084167	155089880	789624	4	110,170,36,47,	0,4511,5412,10187,
#Partially deleted in new
chr3	155079855	155118791	chr3:155079855-155118791	0	+	155084167	155118791	789624	8	146,170,36,162,81,96,119,46,	0,4302,5203,35138,36623,36808,37012,38890,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	155080020	155090500	chr3:155080020-155090500	1	+	155084167	155089880	789624	4	446,170,36,667,	0,4137,5038,9813,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	155080020	155090499	chr3:155080020-155090499	1	+	155084167	155089880	789624	4	446,193,10,666,	0,4137,4334,9813,
#Partially deleted in new
chr3	155080093	155181584	chr3:155080093-155181584	1	+	155084167	155180459	0	23	202,170,36,162,81,96,119,66,135,102,137,94,129,99,81,104,59,120,134,66,96,77,1225,	0,4064,4965,34900,36385,36570,36774,38652,58008,60097,61897,62143,63349,64265,67050,68456,80296,86808,88398,88638,92023,92442,100266,
#Partially deleted in new
chr3	155080110	155180628	chr3:155080110-155180628	1	+	155084167	155180459	0	23	124,170,36,162,81,96,119,66,135,102,137,94,129,99,81,104,59,120,134,66,96,77,269,	0,4047,4948,34883,36368,36553,36757,38635,57991,60080,61880,62126,63332,64248,67033,68439,80279,86791,88381,88621,92006,92425,100249,
#Partially deleted in new
chr3	155080398	155180488	chr3:155080398-155180488	1	+	155084167	155180459	0	23	68,170,36,162,81,96,119,66,135,102,137,94,129,99,81,104,59,120,134,66,96,77,129,	0,3759,4660,34595,36080,36265,36469,38347,57703,59792,61592,61838,63044,63960,66745,68151,79991,86503,88093,88333,91718,92137,99961,
#Partially deleted in new
chr3	155080963	155115155	chr3:155080963-155115155	0	+	155084167	155115155	789624	4	299,170,36,162,	0,3194,4095,34030,
#Partially deleted in new
chr3	155081343	155115077	chr3:155081343-155115077	0	+	155084167	155115077	789624	4	602,170,36,84,	0,2814,3715,33650,
#Deleted in new
chr3	155083524	155084213	chr3:155083524-155084213	0	+	155084167	155084213	789624	2	268,56,	0,633,
#Partially deleted in new
chr3	155083943	155116708	chr3:155083943-155116708	0	+	155084167	155116708	789624	6	99,170,36,162,81,45,	0,214,1115,31050,32535,32720,
#Partially deleted in new
chr3	155084167	155183729	chr3:155084167-155183729	1	+	155084167	155180459	0	22	160,36,162,81,96,119,66,135,102,137,94,129,99,81,104,59,120,134,66,96,77,3370,	0,891,30826,32311,32496,32700,34578,53934,56023,57823,58069,59275,60191,62976,64382,76222,82734,84324,84564,87949,88368,96192,
#Partially deleted in new
chr3	155112293	155115147	chr3:155112293-155115147	0	+	155112293	155112293	8553170	2	482,154,	0,2700,
#Partially deleted in new
chr3	155158369	155183285	chr3:155158369-155183285	3	-	155158369	155158369	8553170	2	614,214,	0,24702,
#Partially deleted in new
chr3	155160389	155168883	chr3:155160389-155168883	0	+	155160389	155160389	8553170	4	59,120,134,152,	0,6512,8102,8342,
#Partially deleted in new
chr3	155172103	155180738	chr3:155172103-155180738	0	+	155172103	155172103	8553170	3	109,77,379,	0,432,8256,
#Deleted in new
chr3	155240944	155243124	chr3:155240944-155243124	1	+	155240944	155240944	8553170	2	681,224,	0,1956,
#Deleted in new
chr3	155240947	155243144	chr3:155240947-155243144	3	+	155240947	155240947	789624	3	31,148,244,	0,530,1953,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	155290228	155293775	chr3:155290228-155293775	3	-	155290943	155293632	789624	3	618,99,156,	0,711,3391,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	155291187	155294176	chr3:155291187-155294176	3	+	155291187	155291187	8553170	3	104,84,256,	0,2504,2733,
#Deleted in new
chr3	155309426	155309807	chr3:155309426-155309807	7	-	155309426	155309426	16724991	1	381,	0,
#Partially deleted in new
chr3	155375579	155676416	chr3:155375579-155676416	1	-	155375682	155676039	789624	22	210,355,80,147,85,125,108,180,98,92,72,162,108,172,121,204,94,171,130,244,147,420,	0,109776,112448,113080,115204,117149,118561,118758,121740,125123,128975,139143,148317,174207,178496,189335,192651,207892,210485,218361,220652,300417,
#Deleted in new
chr3	155375682	155375790	chr3:155375682-155375790	7	-	155375682	155375682	16724991	1	108,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	155401328	155403399	chr3:155401328-155403399	7	-	155401328	155401328	16724991	3	163,604,73,	0,1086,1998,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	155431228	155433398	chr3:155431228-155433398	7	-	155431228	155431228	16724991	2	418,529,	0,1641,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	155437537	155437823	chr3:155437537-155437823	3	-	155437537	155437537	8553170	1	286,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	155449183	155457753	chr3:155449183-155457753	3	+	155449183	155449183	8553170	2	242,1066,	0,7504,
#Partially deleted in new
chr3	155479880	155745067	chr3:155479880-155745067	1	-	155480967	155704224	789624	23	3171,355,80,147,85,125,108,180,98,92,72,162,108,172,121,204,94,171,130,244,147,119,228,	0,5475,8147,8779,10903,12848,14260,14457,17439,20822,24674,34842,44016,69906,74195,85034,88350,103591,106184,114060,116351,224265,264959,
#Partially deleted in new
chr3	155479881	155704208	chr3:155479881-155704208	3	-	155480967	155596367	789624	22	3170,355,80,147,85,125,108,180,98,92,72,162,108,172,121,204,94,171,130,244,147,63,	0,5474,8146,8778,10902,12847,14259,14456,17438,20821,24673,34841,44015,69905,74194,85033,88349,103590,106183,114059,116350,224264,
#Partially deleted in new
chr3	155479881	155676039	chr3:155479881-155676039	1	-	155480967	155676039	789624	23	3170,355,60,80,147,85,125,108,180,98,92,72,162,108,172,121,204,94,171,130,244,147,43,	0,5474,6265,8146,8778,10902,12847,14259,14456,17438,20821,24673,34841,44015,69905,74194,85033,88349,103590,106183,114059,116350,196115,
#Partially deleted in new
chr3	155479881	155676039	chr3:155479881-155676039	1	-	155483365	155676039	789624	24	3170,28,355,60,80,147,85,125,108,180,98,92,72,162,108,172,121,204,94,171,130,244,147,43,	0,3467,5474,6265,8146,8778,10902,12847,14259,14456,17438,20821,24673,34841,44015,69905,74194,85033,88349,103590,106183,114059,116350,196115,
#Partially deleted in new
chr3	155485802	155487121	chr3:155485802-155487121	3	+	155485802	155485802	789624	2	247,161,	0,1158,
#Partially deleted in new
chr3	155490741	155504572	chr3:155490741-155504572	0	-	155490741	155490741	8553170	7	127,125,108,180,98,92,18,	0,1987,3399,3596,6578,9961,13813,
#Deleted in new
chr3	155657759	155658612	chr3:155657759-155658612	7	+	155657759	155657759	16724991	1	853,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	155742141	155743726	chr3:155742141-155743726	3	-	155742141	155742141	8553170	1	1585,	0,
#Deleted in new
chr3	155760616	155761217	chr3:155760616-155761217	7	+	155760616	155760616	16724991	1	601,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	155762616	155806351	chr3:155762616-155806351	1	-	155763516	155806252	789624	5	1302,161,148,60,213,	0,4892,13084,39915,43522,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	155762616	155806266	chr3:155762616-155806266	0	-	155775789	155806252	789624	6	1302,161,148,60,127,128,	0,4892,13084,39915,42980,43522,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	155762617	155806272	chr3:155762617-155806272	3	-	155763516	155802576	789624	5	1301,161,148,60,134,	0,4891,13083,39914,43521,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	155763042	155854442	chr3:155763042-155854442	3	-	155842716	155853997	789624	10	876,161,148,60,196,216,118,185,566,1220,	0,4466,12658,39489,65139,66645,70425,70814,79389,90180,
#Partially deleted in new
chr3	155763527	155806259	chr3:155763527-155806259	0	-	155767627	155806252	789624	4	391,161,60,121,	0,3981,39004,42611,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	155763786	155806251	chr3:155763786-155806251	0	-	155804066	155806251	789624	7	132,161,148,60,123,127,113,	0,3722,11914,38745,40264,41810,42352,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	155821023	155854378	chr3:155821023-155854378	3	-	155828209	155853997	789624	6	7354,216,118,185,188,1156,	0,8664,12444,12833,21408,32199,
#Partially deleted in new
chr3	155826519	155854406	chr3:155826519-155854406	1	-	155828209	155853997	789624	6	1858,216,118,185,188,1184,	0,3168,6948,7337,15912,26703,
#Partially deleted in new
chr3	155826525	155854429	chr3:155826525-155854429	1	-	155828209	155853997	789624	7	294,196,216,118,185,188,1207,	0,1656,3162,6942,7331,15906,26697,
#Partially deleted in new
chr3	155826532	155854416	chr3:155826532-155854416	0	-	155833537	155853997	789624	5	1845,216,118,185,1194,	0,3155,6935,7324,26690,
#Partially deleted in new
chr3	155827268	155854446	chr3:155827268-155854446	1	-	155828209	155853997	789624	4	1109,216,185,1224,	0,2419,6588,25954,
#Partially deleted in new
chr3	155827381	155854250	chr3:155827381-155854250	0	-	155833537	155853997	789624	5	996,216,118,188,1028,	0,2306,6086,15050,25841,
#Partially deleted in new
chr3	155827773	155854456	chr3:155827773-155854456	0	-	155845053	155853997	789624	6	604,216,574,188,64,1234,	0,1914,5694,14658,17239,25449,
#Partially deleted in new
chr3	155827855	155854456	chr3:155827855-155854456	0	-	155853193	155853997	789624	7	522,68,48,118,185,188,1349,	0,1832,2000,5612,6001,14576,25252,
#Partially deleted in new
chr3	155827957	155853491	chr3:155827957-155853491	0	-	155828209	155853491	789624	5	420,216,118,185,121,	0,1730,5510,5899,25413,
#Partially deleted in new
chr3	155828212	155842605	chr3:155828212-155842605	0	-	155828212	155842605	789624	3	165,216,174,	0,1475,14219,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	155844717	155853362	chr3:155844717-155853362	0	-	155844717	155844717	8553170	2	359,140,	0,8505,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	155870535	155944026	chr3:155870535-155944026	3	+	155870870	155937692	0	16	362,182,115,98,104,194,166,152,174,106,116,126,116,131,173,6436,	0,22982,27391,33327,35624,40156,40578,43883,45483,48697,51651,54705,61229,64380,65802,67055,
#Partially deleted in new
chr3	155870649	155937710	chr3:155870649-155937710	1	+	155870870	155937692	0	14	248,98,104,194,166,152,174,106,116,126,116,131,173,120,	0,33213,35510,40042,40464,43769,45369,48583,51537,54591,61115,64266,65688,66941,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	155895412	155910810	chr3:155895412-155910810	0	+	155895412	155895412	8553170	5	134,115,98,104,119,	0,2514,8450,10747,15279,
#Deleted in new
chr3	155987303	155988176	chr3:155987303-155988176	7	+	155987303	155987303	16724991	1	873,	0,
#Partially deleted in new
chr3	156019645	156037647	chr3:156019645-156037647	7	+	156019645	156019645	16724991	5	229,292,120,122,980,	0,6653,9204,13936,17022,
#Partially deleted in new
chr3	156037700	156514424	chr3:156037700-156514424	0	+	156118310	156514424	789624	9	45,129,44,38,80,45,45,44,61,	0,80510,383915,415198,419752,422126,426001,427942,476663,
#Partially deleted in new
chr3	156037700	156474763	chr3:156037700-156474763	0	+	156037700	156037700	8553170	10	45,129,67,44,38,80,45,45,44,30,	0,80510,344441,383915,415198,419752,422126,426001,427942,437033,
#Partially deleted in new
chr3	156037700	156453260	chr3:156037700-156453260	0	+	156037700	156037700	8553170	4	45,129,44,362,	0,80510,383915,415198,
#Deleted in new
chr3	156044154	156044948	chr3:156044154-156044948	7	-	156044154	156044154	16724991	1	794,	0,
#Partially deleted in new
chr3	156111431	156114198	chr3:156111431-156114198	7	-	156111431	156111431	16724991	3	671,676,780,	0,1000,1987,
#Partially deleted in new
chr3	156120547	156538545	chr3:156120547-156538545	3	+	156120611	156536747	789624	14	339,44,38,80,45,45,44,87,86,121,95,121,89,1888,	0,301068,332351,336905,339279,343154,345095,354186,393816,394552,395722,403279,410861,416110,
#Partially deleted in new
chr3	156120577	156537346	chr3:156120577-156537346	1	+	156120611	156536747	789624	13	309,44,38,80,45,45,44,86,121,95,121,89,689,	0,301038,332321,336875,339249,343124,345065,393786,394522,395692,403249,410831,416080,
#Partially deleted in new
chr3	156142961	156538604	chr3:156142961-156538604	1	+	156143178	156536747	789624	14	459,44,38,80,45,45,44,87,86,121,95,121,89,1947,	0,278654,309937,314491,316865,320740,322681,331772,371402,372138,373308,380865,388447,393696,
#Partially deleted in new
chr3	156175851	156176911	chr3:156175851-156176911	7	-	156175851	156175851	16724991	1	1060,	0,
#Partially deleted in new
chr3	156215559	156227883	chr3:156215559-156227883	3	-	156215559	156215559	789624	4	179,104,60,195,	0,1376,2417,12129,
#Partially deleted in new
chr3	156273552	156514408	chr3:156273552-156514408	0	+	156273572	156514408	789624	9	124,44,38,80,45,45,44,87,45,	0,148063,179346,183900,186274,190149,192090,201181,240811,
#Partially deleted in new
chr3	156290986	156539138	chr3:156290986-156539138	1	+	156292117	156536747	789624	14	1142,44,38,80,45,45,44,86,121,95,121,93,2,2481,	0,130629,161912,166466,168840,172715,174656,223377,224113,225283,232840,240422,245558,245671,
#Partially deleted in new
chr3	156291036	156538756	chr3:156291036-156538756	1	+	156291907	156536747	789624	14	1092,44,38,80,45,45,44,87,86,121,95,121,89,2099,	0,130579,161862,166416,168790,172665,174606,183697,223327,224063,225233,232790,240372,245621,
#Partially deleted in new
chr3	156291907	156536747	chr3:156291907-156536747	1	+	156291907	156536747	789624	13	221,44,38,80,45,45,44,86,121,95,121,89,90,	0,129708,160991,165545,167919,171794,173735,222456,223192,224362,231919,239501,244750,
#Partially deleted in new
chr3	156291919	156514391	chr3:156291919-156514391	0	+	156291919	156452935	789624	8	209,38,80,45,45,44,87,28,	0,160979,165533,167907,171782,173723,182814,222444,
#Partially deleted in new
chr3	156441156	156446905	chr3:156441156-156446905	3	-	156441156	156441156	789624	3	272,63,121,	0,4877,5628,
#Partially deleted in new
chr3	156455992	156514405	chr3:156455992-156514405	0	+	156455992	156455992	8553170	7	128,80,45,45,44,171,42,	0,1460,3834,7709,9650,18657,58371,
#Partially deleted in new
chr3	156456923	156515147	chr3:156456923-156515147	0	+	156456923	156456923	8553170	8	120,80,45,45,44,87,86,48,	0,529,2903,6778,8719,17810,57440,58176,
#Partially deleted in new
chr3	156457209	156537241	chr3:156457209-156537241	0	+	156457209	156457209	8553170	12	149,80,45,45,44,87,86,121,95,121,89,584,	0,243,2617,6492,8433,17524,57154,57890,59060,66617,74199,79448,
#Partially deleted in new
chr3	156457477	156460547	chr3:156457477-156460547	0	+	156457477	156457477	8553170	3	55,45,360,	0,2349,2710,
#Deleted in new
chr3	156523739	156524247	chr3:156523739-156524247	3	-	156523739	156523739	8553170	1	508,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	156540139	156555184	chr3:156540139-156555184	3	-	156543202	156555089	789624	5	3130,132,99,127,228,	0,4168,8765,13515,14817,
#Partially deleted in new
chr3	156542820	156555149	chr3:156542820-156555149	1	-	156543202	156555089	789624	5	449,132,138,127,193,	0,1487,6045,10834,12136,
#Partially deleted in new
chr3	156543003	156555125	chr3:156543003-156555125	1	-	156543249	156555089	789624	5	266,146,99,127,169,	0,1290,5901,10651,11953,
#Partially deleted in new
chr3	156543003	156549099	chr3:156543003-156549099	0	-	156543003	156543003	8553170	3	266,132,195,	0,1304,5901,
#Partially deleted in new
chr3	156543007	156551516	chr3:156543007-156551516	0	-	156543007	156543007	8553170	4	262,132,99,119,	0,1300,5897,8390,
#Partially deleted in new
chr3	156543061	156548997	chr3:156543061-156548997	0	-	156543061	156543061	8553170	3	208,132,193,	0,1246,5743,
#Partially deleted in new
chr3	156543140	156554845	chr3:156543140-156554845	1	-	156543202	156553758	789624	5	129,132,99,127,109,	0,1167,5764,10514,11596,
#Partially deleted in new
chr3	156543181	156554125	chr3:156543181-156554125	1	-	156543202	156553758	789624	5	88,132,99,127,133,	0,1126,5723,10473,10811,
#Partially deleted in new
chr3	156543953	156555117	chr3:156543953-156555117	0	-	156543953	156543953	8553170	4	486,99,127,161,	0,4951,9701,11003,
#Partially deleted in new
chr3	156671861	156674378	chr3:156671861-156674378	0	-	156671861	156671861	8553170	2	269,172,	0,2345,
#Partially deleted in new
chr3	156671863	156673933	chr3:156671863-156673933	0	-	156671863	156671863	8553170	2	267,287,	0,1783,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	156671921	156672870	chr3:156671921-156672870	3	-	156671921	156671921	8553170	2	209,526,	0,423,
#Partially deleted in new
chr3	156673234	156705139	chr3:156673234-156705139	1	+	156677697	156705131	789624	6	127,958,169,161,279,456,	0,4422,20785,22630,30189,31449,
#Partially deleted in new
chr3	156674341	156706770	chr3:156674341-156706770	3	+	156677697	156705131	789624	6	455,958,169,161,279,2087,	0,3315,19678,21523,29082,30342,
#Partially deleted in new
chr3	156674844	156706750	chr3:156674844-156706750	1	+	156677697	156705131	789624	6	547,958,169,161,279,2067,	0,2812,19175,21020,28579,29839,
#Partially deleted in new
chr3	156675568	156703695	chr3:156675568-156703695	0	+	156677697	156703695	789624	5	210,958,169,161,272,	0,2088,18451,20296,27855,
#Partially deleted in new
chr3	156676663	156705120	chr3:156676663-156705120	0	+	156677697	156705120	789624	6	31,958,169,161,279,437,	0,993,17356,19201,26760,28020,
#Partially deleted in new
chr3	156676663	156706766	chr3:156676663-156706766	1	+	156677697	156705131	789624	6	31,958,169,161,279,2083,	0,993,17356,19201,26760,28020,
#Partially deleted in new
chr3	156681165	156706750	chr3:156681165-156706750	0	+	156681165	156705131	789624	5	24,169,161,279,2067,	0,12854,14699,22258,23518,
#Deleted in new
chr3	156713883	156714928	chr3:156713883-156714928	7	-	156713883	156713883	16724991	1	1045,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	156747345	156817034	chr3:156747345-156817034	1	-	156747345	156747345	789624	3	3069,89,148,	0,3749,69541,
#Deleted in new
chr3	156750000	156751519	chr3:156750000-156751519	2	-	156750000	156750000	8553170	3	414,89,98,	0,1094,1421,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	156753062	156817062	chr3:156753062-156817062	0	-	156753062	156753062	8553170	2	390,176,	0,63824,
#Deleted in new
chr3	156809550	156810732	chr3:156809550-156810732	7	-	156809550	156809550	16724991	1	1182,	0,
#Partially deleted in new
chr3	156825480	156852840	chr3:156825480-156852840	0	+	156825480	156825480	8553170	3	181,92,73,	0,3805,27287,
#Partially deleted in new
chr3	156826299	156853214	chr3:156826299-156853214	1	+	156829329	156853052	789624	3	77,92,447,	0,2986,26468,
#Partially deleted in new
chr3	156826306	157046129	chr3:156826306-157046129	3	+	156829329	157045750	789624	13	70,92,215,120,176,186,82,78,204,94,165,300,790,	0,2979,26461,94268,101122,116222,152887,166346,166767,185106,198453,201796,219033,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	156826306	157046129	chr3:156826306-157046129	1	+	156993080	157045750	789624	14	70,92,215,120,176,186,181,210,78,204,94,165,300,790,	0,2979,26461,94268,101122,116222,152887,153512,166346,166767,185106,198453,201796,219033,
#Partially deleted in new
chr3	156826310	156888469	chr3:156826310-156888469	1	+	156829329	156888405	789624	4	66,92,215,173,	0,2975,26457,61986,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	156826313	156924625	chr3:156826313-156924625	1	+	156829329	156924510	789624	5	63,92,215,120,131,	0,2972,26454,94261,98181,
#Partially deleted in new
chr3	156826328	156979558	chr3:156826328-156979558	0	+	156826328	156826328	8553170	5	48,92,120,186,365,	0,2957,94246,116200,152865,
#Partially deleted in new
chr3	156826333	156921039	chr3:156826333-156921039	0	+	156826333	156826333	8553170	3	43,92,465,	0,2952,94241,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	156826358	156925256	chr3:156826358-156925256	1	+	156829329	156924510	789624	5	751,92,215,120,762,	0,2927,26409,94216,98136,
#Partially deleted in new
chr3	156826681	156852973	chr3:156826681-156852973	0	+	156826681	156826681	8553170	3	199,92,206,	0,2604,26086,
#Partially deleted in new
chr3	156851174	156853325	chr3:156851174-156853325	1	+	156851174	156853325	789624	4	12,3,216,6,	0,996,1593,2145,
#Partially deleted in new
chr3	156920666	156942797	chr3:156920666-156942797	0	+	156920666	156920666	8553170	3	28,176,269,	0,6762,21862,
#Deleted in new
chr3	156977557	156977825	chr3:156977557-156977825	7	+	156977557	156977557	16724991	1	268,	0,
#Deleted in new
chr3	156988116	156988712	chr3:156988116-156988712	7	-	156988116	156988116	16724991	1	596,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	157017341	157017696	chr3:157017341-157017696	3	+	157017341	157017341	8553170	1	355,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	157081666	157123004	chr3:157081666-157123004	3	-	157081666	157081666	789624	4	1609,158,122,129,	0,20268,21691,41209,
#Partially deleted in new
chr3	157081840	157088547	chr3:157081840-157088547	3	+	157081840	157081840	789624	3	1078,158,261,	0,6018,6446,
#Partially deleted in new
chr3	157089880	157099829	chr3:157089880-157099829	1	+	157089880	157089880	8553170	2	242,347,	0,9602,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	157089880	157101135	chr3:157089880-157101135	3	+	157089880	157089880	789624	3	242,99,450,	0,9602,10805,
#Partially deleted in new
chr3	157089880	157100156	chr3:157089880-157100156	0	+	157089880	157089880	8553170	3	242,99,230,	0,9602,10046,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	157146507	157160760	chr3:157146507-157160760	1	-	157146552	157160094	789624	11	100,99,112,142,105,100,65,121,110,75,969,	0,2779,2977,3328,3557,3774,5669,6528,12358,12897,13284,
#Partially deleted in new
chr3	157147552	157160213	chr3:157147552-157160213	3	-	157148240	157160094	789624	11	1037,99,112,142,105,100,65,121,110,75,422,	0,1734,1932,2283,2512,2729,4624,5483,11313,11852,12239,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	157147794	157154666	chr3:157147794-157154666	0	-	157147794	157147794	8553170	7	795,99,112,142,105,100,2490,	0,1492,1690,2041,2270,2487,4382,
#Deleted in new
chr3	157147795	157152501	chr3:157147795-157152501	0	-	157147795	157147795	8553170	4	794,99,112,2666,	0,1491,1689,2040,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	157147795	157153828	chr3:157147795-157153828	0	-	157147795	157147795	8553170	6	794,99,112,142,105,3547,	0,1491,1689,2040,2269,2486,
#Partially deleted in new
chr3	157147795	157160155	chr3:157147795-157160155	0	-	157157052	157160094	789624	13	794,99,112,142,105,100,202,65,121,73,110,75,364,	0,1491,1689,2040,2269,2486,3933,4381,5240,9215,11070,11609,11996,
#Partially deleted in new
chr3	157147795	157160363	chr3:157147795-157160363	0	-	157157052	157160094	789624	13	794,99,112,142,105,100,14,65,121,148,110,75,572,	0,1491,1689,2040,2269,2486,4121,4381,5240,9140,11070,11609,11996,
#Deleted in new
chr3	157148120	157149945	chr3:157148120-157149945	0	-	157148120	157148120	8553170	3	469,99,461,	0,1166,1364,
#Partially deleted in new
chr3	157148240	157160094	chr3:157148240-157160094	0	-	157151905	157160094	789624	13	349,99,112,142,105,100,106,202,65,121,110,75,303,	0,1046,1244,1595,1824,2041,3245,3488,3936,4795,10625,11164,11551,
#Deleted in new
chr3	157148315	157150074	chr3:157148315-157150074	0	-	157149809	157150074	789624	5	274,99,112,298,10,	0,971,1169,1364,1749,
#Deleted in new
chr3	157148948	157149633	chr3:157148948-157149633	0	-	157148948	157148948	8553170	2	437,149,	0,536,
#Partially deleted in new
chr3	157149004	157160110	chr3:157149004-157160110	0	-	157149004	157149004	8553170	11	381,112,142,105,100,65,121,73,110,75,319,	0,480,831,1060,1277,3172,4031,8006,9861,10400,10787,
#Partially deleted in new
chr3	157149286	157160178	chr3:157149286-157160178	0	-	157157052	157160094	789624	11	99,112,142,105,100,65,121,148,110,75,387,	0,198,549,778,995,2890,3749,7649,9579,10118,10505,
#Deleted in new
chr3	157149443	157152210	chr3:157149443-157152210	0	-	157149443	157149443	8553170	5	153,142,105,100,34,	0,392,621,838,2733,
#Deleted in new
chr3	157149940	157150799	chr3:157149940-157150799	0	-	157149940	157149940	8553170	2	37,735,	0,124,
#Deleted in new
chr3	157149946	157150629	chr3:157149946-157150629	0	-	157149946	157149946	8553170	2	223,348,	0,335,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	157150127	157153628	chr3:157150127-157153628	0	-	157150127	157150127	8553170	5	42,100,65,121,130,	0,154,2049,2908,3371,
#Deleted in new
chr3	157151399	157153106	chr3:157151399-157153106	0	-	157151399	157151399	8553170	3	531,65,71,	0,777,1636,
#Partially deleted in new
chr3	157152016	157158951	chr3:157152016-157158951	0	-	157152016	157152016	8553170	4	225,121,148,86,	0,1019,4919,6849,
#Partially deleted in new
chr3	157152081	157160135	chr3:157152081-157160135	0	-	157152081	157152081	8553170	6	160,121,73,110,75,344,	0,954,4929,6784,7323,7710,
#Partially deleted in new
chr3	157152176	157160136	chr3:157152176-157160136	0	-	157157052	157160094	789624	6	65,121,77,110,75,345,	0,859,4830,6689,7228,7615,
#Partially deleted in new
chr3	157152739	157159441	chr3:157152739-157159441	0	-	157152739	157152739	8553170	3	417,110,37,	0,6126,6665,
#Partially deleted in new
chr3	157153041	157159255	chr3:157153041-157159255	0	-	157153041	157153041	8553170	2	115,390,	0,5824,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	157153547	157153640	chr3:157153547-157153640	3	+	157153547	157153547	8553170	1	93,	0,
#Deleted in new
chr3	157157022	157160094	chr3:157157022-157160094	1	-	157157052	157160094	789624	4	61,110,75,303,	0,1843,2382,2769,
#Deleted in new
chr3	157158664	157160158	chr3:157158664-157160158	0	-	157158664	157158664	8553170	3	311,75,367,	0,740,1127,
#Deleted in new
chr3	157158914	157160137	chr3:157158914-157160137	0	-	157158914	157158914	8553170	2	565,346,	0,877,
#Deleted in new
chr3	157162662	157163932	chr3:157162662-157163932	7	-	157162662	157162662	16724991	1	1270,	0,
#Partially deleted in new
chr3	157163451	157169133	chr3:157163451-157169133	3	+	157163451	157163451	8553170	2	203,117,	0,5565,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	157173917	157174040	chr3:157173917-157174040	7	-	157173917	157173917	16724991	1	123,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	157175222	157239964	chr3:157175222-157239964	0	+	157175222	157175222	8553170	2	167,375,	0,64367,
#Partially deleted in new
chr3	157175268	157381265	chr3:157175268-157381265	3	+	157175268	157175268	8553170	3	121,210,152,	0,64321,205845,
#Partially deleted in new
chr3	157175346	157285291	chr3:157175346-157285291	1	+	157175346	157175346	8553170	3	43,210,314,	0,64243,109631,
#Partially deleted in new
chr3	157230278	157315895	chr3:157230278-157315895	1	+	157230278	157230278	8553170	4	19,210,70,85,	0,9311,55993,85532,
#Deleted in new
chr3	157230319	157231208	chr3:157230319-157231208	7	-	157230319	157230319	16724991	1	889,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	157259741	157503427	chr3:157259741-157503427	3	-	157261133	157495349	789624	14	1629,137,118,135,140,398,210,221,210,167,175,216,295,151,	0,5784,26815,53879,57320,103622,104561,121414,154139,168580,200439,210572,235470,243535,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr3	157259741	157503339	chr3:157259741-157503339	1	-	157261133	157495349	789624	13	1629,137,118,140,398,210,221,210,167,175,216,295,63,	0,5784,26815,57320,103622,104561,121414,154139,168580,200439,210572,235470,243535,
#Partially deleted in new
chr3	157260908	157499554	chr3:157260908-157499554	1	-	157261133	157495349	789624	14	462,137,118,135,140,398,210,221,210,167,175,216,295,160,	0,4617,25648,52712,56153,102455,103394,120247,152972,167413,199272,209405,234303,238486,
#Partially deleted in new
chr3	157286159	157316145	chr3:157286159-157316145	1	+	157286159	157286159	8553170	2	182,335,	0,29651,
#Deleted in new
chr3	157363292	157364481	chr3:157363292-157364481	0	-	157363292	157363292	8553170	2	469,179,	0,1010,
#Partially deleted in new
chr3	157381272	157436953	chr3:157381272-157436953	0	-	157381272	157381272	8553170	4	104,210,167,71,	0,32608,47049,55610,
#Partially deleted in new
chr3	157409668	157428427	chr3:157409668-157428427	0	-	157409668	157409668	8553170	4	240,210,143,106,	0,4212,5459,18653,
#Partially deleted in new
chr3	157428321	157533619	chr3:157428321-157533619	0	-	157428321	157470331	789624	4	167,175,216,107,	0,31859,41992,105191,
#Partially deleted in new
chr3	157436788	157443628	chr3:157436788-157443628	3	+	157436933	157442979	789624	3	275,402,1263,	0,724,5577,
#Partially deleted in new
chr3	157459518	157503574	chr3:157459518-157503574	1	-	157460067	157495349	789624	5	837,216,295,262,104,	0,10795,35693,39876,43952,
#Partially deleted in new
chr3	157459620	157495506	chr3:157459620-157495506	1	-	157459921	157495349	789624	4	306,175,216,295,	0,560,10693,35591,
#Partially deleted in new
chr3	157459621	157503626	chr3:157459621-157503626	1	-	157460067	157495349	789624	4	734,216,295,156,	0,10692,35590,43849,
#Partially deleted in new
chr3	157459621	157470529	chr3:157459621-157470529	0	-	157459621	157459621	8553170	3	305,175,216,	0,559,10692,
#Partially deleted in new
chr3	157460094	157489356	chr3:157460094-157489356	0	-	157460094	157460094	8553170	3	261,216,302,	0,10219,28960,
#Partially deleted in new
chr3	157460214	157533606	chr3:157460214-157533606	0	-	157460214	157495349	789624	4	141,216,295,94,	0,10099,34997,73298,
#Partially deleted in new
chr3	157470418	157533608	chr3:157470418-157533608	0	-	157493221	157495349	789624	5	111,106,107,295,96,	0,18636,22768,24793,63094,
#Partially deleted in new
chr3	157470451	157533615	chr3:157470451-157533615	0	-	157489139	157495349	789624	4	78,106,295,103,	0,18603,24760,63061,
#Partially deleted in new
chr3	157470479	157533616	chr3:157470479-157533616	0	-	157470479	157495349	789624	4	50,295,281,104,	0,24732,28915,63033,
#Partially deleted in new
chr3	157470501	157533614	chr3:157470501-157533614	0	-	157470501	157495349	789624	4	28,295,132,102,	0,24710,34776,63011,
#Deleted in new
chr3	157489060	157499555	chr3:157489060-157499555	0	-	157489060	157489060	8553170	3	100,295,161,	0,6151,10334,
#Partially deleted in new
chr3	157543245	157578885	chr3:157543245-157578885	1	+	157553257	157578333	789624	5	264,111,130,89,607,	0,9984,27931,28709,35033,
#Partially deleted in new
chr3	157543339	157569836	chr3:157543339-157569836	0	+	157543339	157543339	8553170	2	170,530,	0,25967,
#Partially deleted in new
chr3	157543343	157569912	chr3:157543343-157569912	1	+	157553257	157569325	789624	3	166,111,606,	0,9886,25963,
#Partially deleted in new
chr3	157543376	157578754	chr3:157543376-157578754	1	+	157553257	157578284	789624	4	133,111,130,476,	0,9853,27800,34902,
#Partially deleted in new
chr3	157543389	157677749	chr3:157543389-157677749	1	+	157553257	157645855	789624	4	120,111,107,225,	0,9840,102378,134135,
#Partially deleted in new
chr3	157543396	157601233	chr3:157543396-157601233	3	+	157553257	157600298	789624	5	113,111,130,89,1041,	0,9833,27780,28558,56796,
#Partially deleted in new
chr3	157543443	157601082	chr3:157543443-157601082	1	+	157553257	157600381	789624	4	66,111,130,890,	0,9786,27733,56749,
#Deleted in new
chr3	157930491	157930725	chr3:157930491-157930725	3	-	157930491	157930491	8553170	1	234,	0,
#Deleted in new
chr3	157976560	157978136	chr3:157976560-157978136	3	-	157976560	157976560	8553170	2	375,91,	0,1485,
#Partially deleted in new
chr3	158016215	158088983	chr3:158016215-158088983	3	-	158016215	158016215	8553170	5	228,74,152,61,201,	0,43562,55753,57657,72567,
#Partially deleted in new
chr3	158016370	158088997	chr3:158016370-158088997	0	-	158016370	158016370	8553170	3	73,105,215,	0,693,72412,
#Partially deleted in new
chr3	158095953	158105294	chr3:158095953-158105294	0	-	158095953	158095953	8553170	5	2331,93,58,1465,237,	0,3902,4300,6724,9104,
#Partially deleted in new
chr3	158096010	158106050	chr3:158096010-158106050	3	-	158098026	158106024	789624	5	2310,89,58,209,372,	0,3849,4243,6667,9668,
#Partially deleted in new
chr3	158097079	158102887	chr3:158097079-158102887	1	-	158098026	158102845	789624	5	54,1102,89,58,210,	0,103,2780,3174,5598,
#Partially deleted in new
chr3	158097158	158106160	chr3:158097158-158106160	1	-	158098026	158106024	789624	6	1162,89,58,209,72,482,	0,2701,3095,5519,7899,8520,
#Partially deleted in new
chr3	158097599	158106503	chr3:158097599-158106503	1	-	158098026	158106024	789624	5	685,89,58,209,825,	0,2260,2654,5078,8079,
#Deleted in new
chr3	158099884	158105718	chr3:158099884-158105718	0	-	158099884	158105718	789624	5	64,58,209,68,40,	0,369,2793,5173,5794,
#Partially deleted in new
chr3	158105854	158544522	chr3:158105854-158544522	3	+	158122104	158544275	789624	10	156,196,126,174,37,52,69,107,153,340,	0,16248,18011,97217,192184,249002,355080,431237,437480,438328,
#Partially deleted in new
chr3	158107788	158203245	chr3:158107788-158203245	0	+	158122104	158203245	789624	4	183,196,126,174,	0,14314,16077,95283,
#Partially deleted in new
chr3	158110051	158544835	chr3:158110051-158544835	1	+	158122104	158544275	789624	10	160,196,126,174,37,52,69,107,153,653,	0,12051,13814,93020,187987,244805,350883,427040,433283,434131,
#Partially deleted in new
chr3	158110051	158544834	chr3:158110051-158544834	1	+	158122104	158544275	789624	10	172,196,126,174,37,52,69,107,153,652,	0,12051,13814,93020,187987,244805,350883,427040,433283,434131,
#Partially deleted in new
chr3	158110067	158460962	chr3:158110067-158460962	0	+	158122104	158460962	789624	7	156,196,126,174,37,52,28,	0,12035,13798,93004,187971,244789,350867,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	158110088	158545730	chr3:158110088-158545730	1	+	158122104	158544275	789624	9	123,196,126,37,52,69,107,153,1548,	0,12014,13777,187950,244768,350846,427003,433246,434094,
#Partially deleted in new
chr3	158110105	158544793	chr3:158110105-158544793	1	+	158122104	158544275	789624	9	92,196,126,37,52,69,107,153,611,	0,11997,13760,187933,244751,350829,426986,433229,434077,
#Partially deleted in new
chr3	158110106	158544525	chr3:158110106-158544525	1	+	158122104	158544275	789624	9	91,196,126,174,37,52,69,107,343,	0,11996,13759,92965,187932,244750,350828,426985,434076,
#Partially deleted in new
chr3	158110128	158544443	chr3:158110128-158544443	0	+	158122104	158298067	789624	11	83,196,126,174,77,37,52,69,107,153,261,	0,11974,13737,92943,115528,187910,244728,350806,426963,433206,434054,
#Partially deleted in new
chr3	158110148	158136898	chr3:158110148-158136898	0	+	158110148	158110148	8553170	4	75,196,126,154,	0,11954,13717,26596,
#Partially deleted in new
chr3	158110155	158469732	chr3:158110155-158469732	0	+	158110155	158110155	8553170	7	56,196,126,37,52,75,389,	0,11947,13710,187883,244701,350779,359188,
#Partially deleted in new
chr3	158110401	158354908	chr3:158110401-158354908	0	+	158122104	158354908	789624	6	203,196,126,174,37,52,	0,11701,13464,92670,187637,244455,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	158122153	158354951	chr3:158122153-158354951	0	+	158122153	158132152	789624	6	145,126,178,174,37,95,	0,1712,9932,80918,175885,232703,
#Partially deleted in new
chr3	158203071	158543687	chr3:158203071-158543687	0	+	158203071	158543520	789624	6	174,37,52,69,107,353,	0,94967,151785,257863,334020,340263,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	158203137	158303575	chr3:158203137-158303575	0	+	158203137	158203137	8553170	3	108,37,894,	0,94901,99544,
#Deleted in new
chr3	158275808	158276421	chr3:158275808-158276421	7	-	158275808	158275808	16724991	1	613,	0,
#Deleted in new
chr3	158336429	158336777	chr3:158336429-158336777	7	-	158336429	158336429	16724991	1	348,	0,
#Deleted in new
chr3	158496560	158496934	chr3:158496560-158496934	7	+	158496560	158496560	16724991	1	374,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	158545219	158571066	chr3:158545219-158571066	3	-	158545219	158545219	789624	5	358,180,109,97,896,	0,8642,16177,22740,24951,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	158553857	158570907	chr3:158553857-158570907	0	-	158553857	158553857	8553170	4	184,97,52,139,	0,14102,15759,16911,
#Partially deleted in new
chr3	158571162	158606460	chr3:158571162-158606460	3	+	158571300	158605202	0	7	185,148,84,129,160,133,1364,	0,21271,25699,26917,28851,31644,33934,
#Partially deleted in new
chr3	158571162	158605192	chr3:158571162-158605192	0	+	158596888	158605192	789624	6	185,84,129,160,133,96,	0,25699,26917,28851,31644,33934,
#Partially deleted in new
chr3	158571163	158606459	chr3:158571163-158606459	1	+	158592461	158605202	0	6	228,148,84,160,133,1363,	0,21270,25698,28850,31643,33933,
#Partially deleted in new
chr3	158571163	158606459	chr3:158571163-158606459	1	+	158592461	158605202	0	8	228,148,45,84,129,160,133,1363,	0,21270,22218,25698,26916,28850,31643,33933,
#Partially deleted in new
chr3	158571172	158605397	chr3:158571172-158605397	1	+	158592461	158605202	0	8	219,73,148,84,129,160,133,301,	0,17679,21261,25689,26907,28841,31634,33924,
#Partially deleted in new
chr3	158571183	158606456	chr3:158571183-158606456	1	+	158592461	158605202	0	7	208,148,84,129,160,133,1360,	0,21250,25678,26896,28830,31623,33913,
#Partially deleted in new
chr3	158571190	158602939	chr3:158571190-158602939	0	+	158571331	158602939	789624	5	201,84,129,160,133,	0,25671,26889,28823,31616,
#Partially deleted in new
chr3	158571193	158605392	chr3:158571193-158605392	1	+	158592461	158605202	0	9	198,73,148,45,84,129,160,133,296,	0,17658,21240,22188,25668,26886,28820,31613,33903,
#Partially deleted in new
chr3	158571193	158600159	chr3:158571193-158600159	0	+	158592461	158600159	789624	6	198,148,45,84,129,146,	0,21240,22188,25668,26886,28820,
#Partially deleted in new
chr3	158571193	158600175	chr3:158571193-158600175	0	+	158571300	158592474	789624	6	154,65,148,84,129,162,	0,17666,21240,25668,26886,28820,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	158571193	158607252	chr3:158571193-158607252	0	+	158571193	158571193	8553170	8	198,148,40,84,129,160,133,2156,	0,21240,22188,25668,26886,28820,31613,33903,
#Partially deleted in new
chr3	158571194	158605399	chr3:158571194-158605399	1	+	158592461	158605202	0	7	197,73,148,84,160,133,303,	0,17657,21239,25667,28819,31612,33902,
#Partially deleted in new
chr3	158571209	158605218	chr3:158571209-158605218	1	+	158592461	158605202	0	8	138,136,148,84,129,160,133,122,	0,2088,21224,25652,26870,28804,31597,33887,
#Partially deleted in new
chr3	158571260	158600173	chr3:158571260-158600173	0	+	158571300	158600173	789624	6	87,148,45,84,129,160,	0,21173,22121,25601,26819,28753,
#Partially deleted in new
chr3	158571260	158598160	chr3:158571260-158598160	0	+	158571300	158592436	789624	5	87,73,148,84,81,	0,17591,21173,25601,26819,
#Partially deleted in new
chr3	158609609	158610857	chr3:158609609-158610857	7	-	158609609	158609609	16724991	2	597,222,	0,1026,
#Deleted in new
chr3	158626655	158626849	chr3:158626655-158626849	7	-	158626655	158626655	16724991	1	194,	0,
#Partially deleted in new
chr3	158644277	158692575	chr3:158644277-158692575	3	+	158644634	158691467	789624	18	438,153,133,205,117,151,158,85,138,102,57,138,83,163,145,161,54,1240,	0,1351,1887,2465,4763,7818,9032,10269,14644,16596,18350,21059,22026,37717,40246,45885,46861,47058,
#Partially deleted in new
chr3	158644527	158692572	chr3:158644527-158692572	0	+	158644634	158662664	789624	18	188,153,133,205,117,155,154,85,149,93,57,138,83,163,145,161,54,1237,	0,1101,1637,2215,4513,7568,8786,10019,14394,16355,18100,20809,21776,37467,39996,45635,46611,46808,
#Partially deleted in new
chr3	158644527	158682433	chr3:158644527-158682433	1	+	158644634	158682169	789624	14	188,153,133,205,117,151,158,85,138,102,57,138,83,439,	0,1101,1637,2215,4513,7568,8782,10019,14394,16346,18100,20809,21776,37467,
#Partially deleted in new
chr3	158644596	158692569	chr3:158644596-158692569	1	+	158644634	158691467	789624	19	119,153,133,205,117,57,151,158,85,138,102,57,138,83,163,145,161,54,1234,	0,1032,1568,2146,4444,5408,7499,8713,9950,14325,16277,18031,20740,21707,37398,39927,45566,46542,46739,
#Deleted in new
chr3	158644704	158646781	chr3:158644704-158646781	0	+	158645772	158646781	789624	4	177,153,133,39,	0,924,1460,2038,
#Partially deleted in new
chr3	158645821	158669593	chr3:158645821-158669593	0	-	158646098	158669593	789624	4	388,63,137,161,	0,21190,23174,23611,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	158646887	158651020	chr3:158646887-158651020	0	+	158646887	158646887	8553170	2	60,1980,	0,2153,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	158652197	158657518	chr3:158652197-158657518	0	+	158652197	158652197	8553170	4	49,158,85,1714,	0,1112,2349,3607,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	158660263	158665407	chr3:158660263-158665407	0	+	158660263	158660263	8553170	4	361,102,57,71,	0,610,2364,5073,
#Partially deleted in new
chr3	158666413	158672693	chr3:158666413-158672693	3	-	158666645	158672478	0	6	331,63,137,178,63,344,	0,598,2582,3019,4543,5936,
#Partially deleted in new
chr3	158681987	158690586	chr3:158681987-158690586	0	+	158681987	158681987	8553170	3	170,145,424,	0,2536,8175,
#Partially deleted in new
chr3	158682106	158685314	chr3:158682106-158685314	0	+	158682106	158682106	8553170	2	51,791,	0,2417,
#Partially deleted in new
chr3	158684630	158691899	chr3:158684630-158691899	0	+	158684630	158691152	789624	3	38,54,564,	0,6508,6705,
#Deleted in new
chr3	158693119	158693768	chr3:158693119-158693768	3	-	158693119	158693119	8553170	1	649,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	158695366	158695581	chr3:158695366-158695581	3	+	158695366	158695366	8553170	1	215,	0,
#Partially deleted in new
chr3	158696891	158732696	chr3:158696891-158732696	3	-	158697677	158732415	789624	6	936,63,137,196,63,557,	0,1016,7899,13846,16905,35248,
#Partially deleted in new
chr3	158698120	158710872	chr3:158698120-158710872	0	-	158698120	158698120	8553170	3	94,137,135,	0,6670,12617,
#Partially deleted in new
chr3	158704650	158732442	chr3:158704650-158732442	1	-	158704775	158732415	789624	4	277,196,63,303,	0,6087,9146,27489,
#Partially deleted in new
chr3	158704790	158705708	chr3:158704790-158705708	0	-	158704790	158704790	8553170	2	137,50,	0,868,
#Partially deleted in new
chr3	158704808	158732489	chr3:158704808-158732489	0	-	158704808	158704808	8553170	3	119,63,350,	0,8988,27331,
#Partially deleted in new
chr3	158732197	158807421	chr3:158732197-158807421	0	+	158732413	158807421	789624	5	331,53,113,43,26,	0,72121,73164,74842,75198,
#Partially deleted in new
chr3	158732262	158737062	chr3:158732262-158737062	1	+	158732262	158732262	8553170	4	266,87,43,170,	0,1688,2298,4630,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	158732326	158784070	chr3:158732326-158784070	1	+	158732326	158732326	8553170	5	202,87,78,115,192,	0,1624,8062,9703,51552,
#Partially deleted in new
chr3	158732356	158804371	chr3:158732356-158804371	0	+	158732413	158804371	789624	3	172,87,53,	0,1594,71962,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	158732377	158771089	chr3:158732377-158771089	1	+	158732377	158732377	8553170	6	151,87,78,115,205,84,	0,1573,8011,9652,36900,38628,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	158735720	158737905	chr3:158735720-158737905	3	+	158735720	158735720	8553170	1	2185,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	158740416	158743592	chr3:158740416-158743592	1	+	158740416	158740416	8553170	4	50,115,110,812,	0,1613,1955,2364,
#Partially deleted in new
chr3	158740425	158743336	chr3:158740425-158743336	1	+	158740425	158740425	8553170	3	41,115,556,	0,1604,2355,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	158747576	158805474	chr3:158747576-158805474	0	+	158805364	158805474	789624	3	473,53,113,	0,56742,57785,
#Deleted in new
chr3	158763430	158763753	chr3:158763430-158763753	7	+	158763430	158763430	16724991	1	323,	0,
#Deleted in new
chr3	158782546	158783124	chr3:158782546-158783124	3	+	158782546	158782546	8553170	1	578,	0,
#Deleted in new
chr3	158801256	158801935	chr3:158801256-158801935	3	-	158801256	158801256	8553170	1	679,	0,
#Partially deleted in new
chr3	158801864	158829719	chr3:158801864-158829719	3	+	158802005	158828982	789624	16	451,53,113,43,68,109,103,99,112,57,157,98,113,48,58,741,	0,2454,3497,5175,5531,7314,12100,17784,18350,19732,20119,21563,22259,24150,25415,27114,
#Partially deleted in new
chr3	158801925	158829718	chr3:158801925-158829718	1	+	158802005	158828982	789624	15	390,49,43,68,109,103,99,112,57,157,98,113,48,58,740,	0,2397,5114,5470,7253,12039,17723,18289,19671,20058,21502,22198,24089,25354,27053,
#Partially deleted in new
chr3	158801925	158829718	chr3:158801925-158829718	1	+	158802005	158828982	789624	16	390,53,113,43,68,109,103,99,112,57,157,98,113,48,58,740,	0,2393,3436,5114,5470,7253,12039,17723,18289,19671,20058,21502,22198,24089,25354,27053,
#Partially deleted in new
chr3	158802050	158829716	chr3:158802050-158829716	0	+	158802152	158807060	789624	15	265,53,43,68,109,103,99,112,57,157,98,113,48,58,738,	0,2268,4989,5345,7128,11914,17598,18164,19546,19933,21377,22073,23964,25229,26928,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	158802056	158829716	chr3:158802056-158829716	0	+	158802152	158807060	789624	16	259,53,43,68,109,103,99,112,57,157,98,113,124,48,58,738,	0,2262,4983,5339,7122,11908,17592,18158,19540,19927,21371,22067,23121,23958,25223,26922,
#Partially deleted in new
chr3	158802090	158829116	chr3:158802090-158829116	1	+	158802152	158828982	789624	16	225,53,113,43,68,109,103,99,112,57,157,98,113,48,58,138,	0,2228,3271,4949,5305,7088,11874,17558,18124,19506,19893,21337,22033,23924,25189,26888,
#Partially deleted in new
chr3	158802136	158809261	chr3:158802136-158809261	0	+	158802152	158805361	789624	6	179,53,134,43,68,83,	0,2182,3204,4903,5259,7042,
#Partially deleted in new
chr3	158802155	158829715	chr3:158802155-158829715	0	+	158802155	158805374	789624	16	129,53,113,43,68,109,103,99,112,57,157,98,113,48,58,737,	0,2163,3206,4884,5240,7023,11809,17493,18059,19441,19828,21272,21968,23859,25124,26823,
#Partially deleted in new
chr3	158802378	158813981	chr3:158802378-158813981	0	+	158802485	158813981	789624	7	189,53,113,43,68,109,17,	0,1940,2983,4661,5017,6800,11586,
#Partially deleted in new
chr3	158802485	158807440	chr3:158802485-158807440	0	+	158802485	158807440	789624	5	130,53,113,43,45,	0,1833,2876,4554,4910,
#Partially deleted in new
chr3	158804230	158809273	chr3:158804230-158809273	0	+	158804230	158804230	8553170	5	141,113,43,68,95,	0,1131,2809,3165,4948,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	158809001	158819706	chr3:158809001-158819706	0	+	158809001	158809001	8553170	3	286,103,58,	0,4963,10647,
#Partially deleted in new
chr3	158809236	158823486	chr3:158809236-158823486	0	+	158809236	158823486	789624	6	51,103,99,112,157,59,	0,4728,10412,10978,12747,14191,
#Partially deleted in new
chr3	158819546	158829163	chr3:158819546-158829163	0	+	158819546	158819546	8553170	9	201,112,57,157,98,113,48,58,185,	0,668,2050,2437,3881,4577,6468,7733,9432,
#Partially deleted in new
chr3	158822442	158829718	chr3:158822442-158829718	0	+	158822442	158822442	8553170	5	1083,113,48,58,740,	0,1681,3572,4837,6536,
#Deleted in new
chr3	158823193	158824476	chr3:158823193-158824476	0	+	158823193	158823193	8553170	2	332,353,	0,930,
#Deleted in new
chr3	158841092	158841960	chr3:158841092-158841960	7	-	158841092	158841092	16724991	1	868,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	158869897	158871821	chr3:158869897-158871821	3	+	158869897	158869897	8553170	1	1924,	0,
#Partially deleted in new
chr3	158962234	159764599	chr3:158962234-159764599	0	+	158962234	158962234	8553170	4	71,65,136,157,	0,283608,300313,802208,
#Partially deleted in new
chr3	158962927	159262677	chr3:158962927-159262677	0	+	158962927	158962927	8553170	3	370,65,130,	0,282915,299620,
#Partially deleted in new
chr3	159069251	159764462	chr3:159069251-159764462	0	+	159069432	159764462	789624	5	190,65,73,136,20,	0,176591,183475,193296,695191,
#Partially deleted in new
chr3	159069263	159896774	chr3:159069263-159896774	1	+	159069432	159896774	789624	10	178,65,136,696,119,118,198,124,94,52,	0,176579,193284,695179,796899,816943,818444,819556,822833,827459,
#Partially deleted in new
chr3	159069263	159897358	chr3:159069263-159897358	3	+	159069432	159896774	789624	11	178,65,81,136,696,119,118,198,124,94,636,	0,176579,183463,193284,695179,796899,816943,818444,819556,822833,827459,
#Partially deleted in new
chr3	159069327	159263747	chr3:159069327-159263747	1	+	159069432	159262731	789624	4	114,65,81,1200,	0,176515,183399,193220,
#Partially deleted in new
chr3	159069327	159265703	chr3:159069327-159265703	3	+	159069432	159265403	789624	5	114,65,81,136,489,	0,176515,183399,193220,195887,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	159069327	159266307	chr3:159069327-159266307	1	+	159069432	159265403	789624	4	114,65,136,1093,	0,176515,193220,195887,
#Partially deleted in new
chr3	159069673	159764612	chr3:159069673-159764612	0	+	159069796	159764612	789624	5	132,65,81,136,170,	0,176169,183053,192874,694769,
#Partially deleted in new
chr3	159069695	159764706	chr3:159069695-159764706	0	+	159069796	159764706	789624	4	110,65,136,264,	0,176147,192852,694747,
#Partially deleted in new
chr3	159069854	159764511	chr3:159069854-159764511	0	+	159252739	159764511	789624	5	223,65,81,136,69,	0,175988,182872,192693,694588,
#Partially deleted in new
chr3	159273243	159897366	chr3:159273243-159897366	1	+	159273820	159896774	789624	8	640,696,119,118,198,124,94,644,	0,491199,592919,612963,614464,615576,618853,623479,
#Partially deleted in new
chr3	159273754	159897350	chr3:159273754-159897350	1	+	159273820	159896774	789624	8	129,657,119,118,198,124,94,628,	0,490688,592408,612452,613953,615065,618342,622968,
#Partially deleted in new
chr3	159273754	159897350	chr3:159273754-159897350	1	+	159273820	159896774	789624	7	129,119,118,198,124,94,628,	0,592408,612452,613953,615065,618342,622968,
#Deleted in new
chr3	159282645	159282734	chr3:159282645-159282734	3	+	159282645	159282645	5263520	1	89,	0,
#Deleted in new
chr3	159386755	159387440	chr3:159386755-159387440	7	-	159386755	159386755	16724991	1	685,	0,
#Deleted in new
chr3	159721523	159722401	chr3:159721523-159722401	7	-	159721523	159721523	16724991	1	878,	0,
#Deleted in new
chr3	159763712	159764963	chr3:159763712-159764963	0	+	159764460	159764963	789624	2	178,521,	0,730,
#Partially deleted in new
chr3	159764001	159892541	chr3:159764001-159892541	1	+	159764460	159892254	789624	7	223,657,119,118,198,124,445,	0,441,102161,122205,123706,124818,128095,
#Deleted in new
chr3	159764215	159764890	chr3:159764215-159764890	0	+	159764460	159764890	789624	2	135,448,	0,227,
#Partially deleted in new
chr3	159765102	159897073	chr3:159765102-159897073	0	+	159765102	159896774	789624	4	36,119,94,351,	0,101060,126994,131620,
#Deleted in new
chr3	159765386	159768454	chr3:159765386-159768454	3	-	159765386	159765386	8553170	2	357,151,	0,2917,
#Deleted in new
chr3	159768316	159768612	chr3:159768316-159768612	0	-	159768316	159768316	8553170	2	183,39,	0,257,
#Deleted in new
chr3	159808415	159808570	chr3:159808415-159808570	3	-	159808415	159808415	8553170	1	155,	0,
#Partially deleted in new
chr3	159839860	159897360	chr3:159839860-159897360	3	+	159840184	159896774	789624	7	354,119,118,198,124,94,638,	0,26302,46346,47847,48959,52236,56862,
#Partially deleted in new
chr3	159839937	159886376	chr3:159839937-159886376	0	+	159839937	159839937	8553170	3	277,119,170,	0,26225,46269,
#Partially deleted in new
chr3	159839939	159897234	chr3:159839939-159897234	0	+	159840184	159892106	789624	4	275,119,94,512,	0,26223,52157,56783,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	159840059	159846052	chr3:159840059-159846052	0	+	159840059	159840059	8553170	2	155,651,	0,5342,
#Partially deleted in new
chr3	159840098	159888119	chr3:159840098-159888119	0	+	159840098	159840098	8553170	4	116,119,118,412,	0,26064,46108,47609,
#Partially deleted in new
chr3	159852938	159897349	chr3:159852938-159897349	1	+	159853379	159896774	789624	7	519,119,118,198,124,94,627,	0,13224,33268,34769,35881,39158,43784,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	159852991	159894723	chr3:159852991-159894723	0	+	159852991	159852991	8553170	4	466,119,2737,2627,	0,13171,33215,39105,
#Partially deleted in new
chr3	159888791	159892157	chr3:159888791-159892157	0	+	159888791	159888791	8553170	2	152,61,	0,3305,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	159909381	160039275	chr3:159909381-160039275	1	-	159909381	159909381	8553170	5	5093,197,69,146,366,	0,79715,84855,99730,129528,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	159913399	160207092	chr3:159913399-160207092	3	-	159913399	159913399	789624	10	1075,197,69,262,94,146,65,142,137,238,	0,75697,80837,84444,94382,95712,112070,273798,275398,293455,
#Partially deleted in new
chr3	159988749	159996012	chr3:159988749-159996012	3	+	159989056	159995559	789624	7	425,146,114,42,42,144,609,	0,1417,4262,4701,4818,4951,6654,
#Partially deleted in new
chr3	159988835	159990332	chr3:159988835-159990332	0	+	159988835	159988835	8553170	2	339,166,	0,1331,
#Partially deleted in new
chr3	159988860	159996019	chr3:159988860-159996019	0	+	159988860	159988860	8553170	4	314,146,833,616,	0,1306,4151,6543,
#Partially deleted in new
chr3	159988869	159995671	chr3:159988869-159995671	0	+	159988869	159988869	8553170	6	305,146,114,159,144,268,	0,1297,4142,4581,4831,6534,
#Partially deleted in new
chr3	159988953	159996019	chr3:159988953-159996019	1	+	159989056	159995559	789624	6	221,146,114,42,144,616,	0,1213,4058,4614,4747,6450,
#Partially deleted in new
chr3	159988953	159995671	chr3:159988953-159995671	1	+	159989056	159995559	789624	6	221,146,42,42,144,268,	0,1213,4497,4614,4747,6450,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	159998173	160015861	chr3:159998173-160015861	0	-	159998173	159998173	8553170	5	144,146,86,446,166,	0,10938,13292,13491,17522,
#Partially deleted in new
chr3	160016023	160031423	chr3:160016023-160031423	3	+	160016023	160016023	8553170	5	57,62,99,277,245,	0,3113,4622,10586,15155,
#Deleted in new
chr3	160100849	160102793	chr3:160100849-160102793	7	+	160100849	160100849	16724991	1	1944,	0,
#Partially deleted in new
chr3	160206508	160225299	chr3:160206508-160225299	0	-	160206508	160206508	8553170	4	177,116,88,157,	0,346,17663,18634,
#Deleted in new
chr3	160225495	160228213	chr3:160225495-160228213	3	+	160225635	160226379	789624	1	2718,	0,
#Deleted in new
chr3	160225796	160228054	chr3:160225796-160228054	0	+	160225796	160226379	789624	2	886,224,	0,2034,
#Partially deleted in new
chr3	160227453	160449829	chr3:160227453-160449829	3	-	160258524	160439183	789624	19	269,169,124,173,90,172,148,136,65,164,75,119,180,138,90,110,955,70,113,	0,31013,40959,49852,50127,51739,53213,55024,58350,73429,76461,80209,92306,128559,130035,138589,210778,221272,222263,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr3	160256985	160399532	chr3:160256985-160399532	3	-	160258524	160384600	789624	20	1650,124,173,90,172,148,136,65,164,75,119,180,138,90,110,69,111,222,83,387,	0,11427,20320,20595,22207,23681,25492,28818,43897,46929,50677,62774,99027,100503,109057,118826,120444,124517,127578,142160,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr3	160256991	160383656	chr3:160256991-160383656	1	-	160258524	160375839	789624	19	1644,124,173,90,172,148,136,65,164,75,119,180,138,90,110,69,111,216,220,	0,11421,20314,20589,22201,23675,25486,28812,43891,46923,50671,62768,99021,100497,109051,118820,120438,124511,126445,
#Partially deleted in new
chr3	160258179	160399273	chr3:160258179-160399273	1	-	160258524	160375839	789624	21	456,124,173,90,172,148,136,65,164,75,119,180,138,90,110,69,111,216,68,241,128,	0,10233,19126,19401,21013,22487,24298,27624,42703,45735,49483,61580,97833,99309,107863,117632,119250,123323,125257,126226,140966,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr3	160258184	160399209	chr3:160258184-160399209	0	-	160258184	160258184	8553170	20	451,124,173,90,172,148,136,65,164,75,119,180,138,90,69,111,216,1210,98,64,	0,10228,19121,19396,21008,22482,24293,27619,42698,45730,49478,61575,97828,99304,117627,119245,123318,125252,133361,140961,
#Partially deleted in new
chr3	160258402	160268761	chr3:160258402-160268761	0	-	160258402	160258402	8553170	2	233,349,	0,10010,
#Partially deleted in new
chr3	160258418	160277478	chr3:160258418-160277478	0	-	160258418	160258418	8553170	4	217,124,74,173,	0,9994,16111,18887,
#Partially deleted in new
chr3	160299078	160307781	chr3:160299078-160307781	0	-	160299263	160307781	789624	4	196,164,75,119,	0,1804,4836,8584,
#Partially deleted in new
chr3	160303915	160357499	chr3:160303915-160357499	0	-	160343755	160357499	789624	6	74,119,180,165,138,11,	0,3747,15844,39735,52097,53573,
#Partially deleted in new
chr3	160303943	160320147	chr3:160303943-160320147	0	-	160303943	160303943	8553170	3	46,119,388,	0,3719,15816,
#Partially deleted in new
chr3	160319832	160399221	chr3:160319832-160399221	0	-	160319832	160319832	8553170	6	107,138,90,69,111,76,	0,36180,37656,55979,57597,79313,
#Deleted in new
chr3	160342684	160343015	chr3:160342684-160343015	7	+	160342684	160342684	16724991	1	331,	0,
#Partially deleted in new
chr3	160356012	160399207	chr3:160356012-160399207	0	-	160356012	160375839	789624	8	138,90,110,69,111,222,58,62,	0,1476,10030,19799,21417,25490,28576,43133,
#Partially deleted in new
chr3	160356012	160377454	chr3:160356012-160377454	0	-	160357564	160377454	789624	5	138,90,60,69,25,	0,1476,10080,19799,21417,
#Partially deleted in new
chr3	160357484	160399223	chr3:160357484-160399223	0	-	160357484	160357484	8553170	6	94,69,111,222,83,78,	0,18327,19945,24018,27079,41661,
#Partially deleted in new
chr3	160357484	160399544	chr3:160357484-160399544	0	-	160357484	160375839	789624	5	94,110,69,111,145,	0,8558,18327,19945,41915,
#Partially deleted in new
chr3	160366052	160399533	chr3:160366052-160399533	0	-	160366052	160384600	789624	6	100,69,111,222,83,134,	0,9759,11377,15450,18511,33347,
#Partially deleted in new
chr3	160366054	160399223	chr3:160366054-160399223	0	-	160366054	160375839	789624	7	98,69,111,58,70,83,78,	0,9757,11375,11778,15448,18509,33091,
#Partially deleted in new
chr3	160366082	160399216	chr3:160366082-160399216	0	-	160366082	160375839	789624	5	70,69,88,241,71,	0,9729,11347,18323,33063,
#Partially deleted in new
chr3	160375818	160399216	chr3:160375818-160399216	0	-	160377536	160384600	789624	5	62,136,222,83,71,	0,1611,5684,8745,23327,
#Partially deleted in new
chr3	160377435	160399216	chr3:160377435-160399216	0	-	160377435	160377435	8553170	5	82,107,68,241,71,	0,4176,6001,6970,21710,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	160381568	160399544	chr3:160381568-160399544	0	-	160381568	160384600	789624	4	156,83,158,145,	0,2995,12584,17831,
#Partially deleted in new
chr3	160381604	160399520	chr3:160381604-160399520	0	-	160381604	160381604	8553170	4	114,68,241,121,	0,1832,2801,17795,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	160383984	160399247	chr3:160383984-160399247	0	-	160383984	160383984	8553170	2	662,102,	0,15161,
#Partially deleted in new
chr3	160384600	160399880	chr3:160384600-160399880	0	-	160384600	160384600	8553170	2	46,512,	0,14768,
#Deleted in new
chr3	160399273	160404336	chr3:160399273-160404336	0	+	160400826	160404336	789624	6	79,105,144,179,192,9,	0,371,1548,2641,3402,5054,
#Partially deleted in new
chr3	160399303	160434962	chr3:160399303-160434962	3	+	160400826	160433809	0	24	446,144,179,192,177,165,128,141,151,165,234,186,162,226,80,153,127,190,145,174,183,233,184,1306,	0,1518,2611,3372,5024,12616,13022,14169,15063,16947,18419,20054,21436,24121,24457,25563,26770,29449,31295,31728,32339,32979,33722,34353,
#Deleted in new
chr3	160399637	160402867	chr3:160399637-160402867	0	+	160400826	160402867	789624	4	112,366,179,192,	0,962,2277,3038,
#Deleted in new
chr3	160399638	160404336	chr3:160399638-160404336	0	+	160400826	160404336	789624	5	59,144,179,192,9,	0,1183,2276,3037,4689,
#Partially deleted in new
chr3	160399642	160412453	chr3:160399642-160412453	0	+	160399642	160399642	8553170	5	55,192,127,165,128,	0,3033,4735,12277,12683,
#Partially deleted in new
chr3	160399642	160412025	chr3:160399642-160412025	0	+	160402732	160412025	789624	4	107,192,177,106,	0,3033,4685,12277,
#Partially deleted in new
chr3	160399649	160411964	chr3:160399649-160411964	0	+	160402732	160411964	789624	5	48,104,192,177,45,	0,2340,3026,4678,12270,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	160399649	160414500	chr3:160399649-160414500	0	+	160399649	160399649	8553170	9	100,144,179,192,177,165,524,141,134,	0,1172,2265,3026,4678,12270,12676,13823,14717,
#Partially deleted in new
chr3	160399649	160433910	chr3:160399649-160433910	1	+	160400826	160433809	789624	24	100,144,104,192,177,165,128,141,151,165,234,186,162,226,80,153,127,190,145,174,183,233,184,254,	0,1172,2340,3026,4678,12270,12676,13823,14717,16601,18073,19708,21090,23775,24111,25217,26424,29103,30949,31382,31993,32633,33376,34007,
#Partially deleted in new
chr3	160399650	160424947	chr3:160399650-160424947	0	+	160400826	160411924	789624	14	99,144,9,165,128,141,151,165,234,186,162,226,80,81,	0,1171,2264,12269,12675,13822,14716,16600,18072,19707,21089,23774,24110,25216,
#Partially deleted in new
chr3	160399665	160414515	chr3:160399665-160414515	0	+	160400826	160414515	789624	9	84,338,179,192,177,165,128,141,149,	0,962,2249,3010,4662,12254,12660,13807,14701,
#Partially deleted in new
chr3	160399667	160433990	chr3:160399667-160433990	1	+	160400826	160433809	0	22	1298,179,192,177,165,128,141,151,165,234,186,162,226,80,153,127,190,145,183,233,184,334,	0,2247,3008,4660,12252,12658,13805,14699,16583,18055,19690,21072,23757,24093,25199,26406,29085,30931,31975,32615,33358,33989,
#Deleted in new
chr3	160399668	160404504	chr3:160399668-160404504	0	+	160401991	160404504	789624	4	81,179,192,177,	0,2246,3007,4659,
#Deleted in new
chr3	160399668	160404358	chr3:160399668-160404358	0	+	160400826	160404358	789624	5	81,338,179,192,31,	0,959,2246,3007,4659,
#Partially deleted in new
chr3	160400481	160434953	chr3:160400481-160434953	1	+	160400826	160433809	0	23	484,179,192,177,165,128,141,151,165,234,186,162,226,80,153,127,190,145,174,183,233,184,1297,	0,1433,2194,3846,11438,11844,12991,13885,15769,17241,18876,20258,22943,23279,24385,25592,28271,30117,30550,31161,31801,32544,33175,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	160402808	160412852	chr3:160402808-160412852	0	+	160402808	160402808	8553170	4	59,177,165,323,	0,1519,9111,9721,
#Partially deleted in new
chr3	160403990	160413484	chr3:160403990-160413484	0	+	160403990	160403990	8553170	5	81,177,165,128,12,	0,337,7929,8335,9482,
#Partially deleted in new
chr3	160404498	160416403	chr3:160404498-160416403	0	+	160404498	160404498	8553170	6	6,58,128,141,151,153,	0,7421,7827,8974,9868,11752,
#Deleted in new
chr3	160404587	160404685	chr3:160404587-160404685	3	+	160404587	160404587	5263520	1	98,	0,
#Deleted in new
chr3	160404744	160404825	chr3:160404744-160404825	3	+	160404744	160404744	5263520	1	81,	0,
#Partially deleted in new
chr3	160411757	160414517	chr3:160411757-160414517	0	+	160411757	160411757	8553170	4	327,128,141,151,	0,568,1715,2609,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	160412021	160413583	chr3:160412021-160413583	0	+	160412021	160412021	8553170	4	63,128,320,111,	0,304,508,1451,
#Partially deleted in new
chr3	160412334	160413754	chr3:160412334-160413754	0	+	160412334	160412334	8553170	2	119,282,	0,1138,
#Partially deleted in new
chr3	160414022	160434954	chr3:160414022-160434954	0	+	160414022	160414022	8553170	16	495,165,234,186,162,226,80,153,127,190,145,174,183,233,184,1298,	0,2228,3700,5335,6717,9402,9738,10844,12051,14730,16576,17009,17620,18260,19003,19634,
#Partially deleted in new
chr3	160414437	160416627	chr3:160414437-160416627	0	+	160414437	160414437	8553170	2	80,377,	0,1813,
#Deleted in new
chr3	160417623	160419502	chr3:160417623-160419502	0	+	160417623	160417623	8553170	2	333,145,	0,1734,
#Partially deleted in new
chr3	160420581	160423594	chr3:160420581-160423594	0	+	160420581	160420581	8553170	2	320,170,	0,2843,
#Partially deleted in new
chr3	160428795	160431043	chr3:160428795-160431043	0	+	160428795	160428795	8553170	2	147,445,	0,1803,
#Partially deleted in new
chr3	160430928	160432443	chr3:160430928-160432443	0	+	160430928	160430928	8553170	3	277,183,161,	0,714,1354,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	160432444	160448937	chr3:160432444-160448937	1	-	160435872	160439183	789624	3	3448,955,212,	0,5787,16281,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	160435502	160449829	chr3:160435502-160449829	3	-	160437971	160439183	789624	3	3684,70,113,	0,13223,14214,
#Partially deleted in new
chr3	160438650	160449725	chr3:160438650-160449725	0	-	160438650	160439183	789624	3	536,70,254,	0,10075,10821,
#Partially deleted in new
chr3	160438718	160449763	chr3:160438718-160449763	0	-	160438718	160439183	789624	2	468,80,	0,10965,
#Partially deleted in new
chr3	160438730	160449760	chr3:160438730-160449760	0	-	160438730	160449694	789624	3	456,70,77,	0,9995,10953,
#Partially deleted in new
chr3	160438840	160449765	chr3:160438840-160449765	0	-	160438840	160439183	789624	4	346,111,70,49,	0,8891,9885,10876,
#Partially deleted in new
chr3	160438848	160449613	chr3:160438848-160449613	0	-	160438848	160439183	789624	3	338,70,169,	0,9877,10596,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	160439000	160485773	chr3:160439000-160485773	0	-	160439000	160485376	789624	2	186,415,	0,46358,
#Deleted in new
chr3	160452597	160453403	chr3:160452597-160453403	7	+	160452597	160452597	16724991	1	806,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	160472347	160472416	chr3:160472347-160472416	3	-	160472347	160472347	8553170	1	69,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	160494994	160565588	chr3:160494994-160565588	3	-	160502103	160565282	0	17	7208,95,163,72,105,129,132,45,170,87,86,96,53,30,90,45,375,	0,9963,13112,14805,19082,20457,26784,30805,30943,32958,35860,36467,40518,40666,40813,41801,70219,
#Partially deleted in new
chr3	160504957	160521796	chr3:160504957-160521796	0	-	160504957	160521796	789624	5	95,163,105,129,18,	0,3149,9119,10494,16821,
#Deleted in new
chr3	160514906	160515236	chr3:160514906-160515236	3	-	160514906	160514906	789624	1	330,	0,
#Deleted in new
chr3	160564208	160565571	chr3:160564208-160565571	0	-	160564208	160564208	8553170	2	432,358,	0,1005,
#Deleted in new
chr3	160565446	160568199	chr3:160565446-160568199	7	+	160565446	160565446	16724991	3	194,147,657,	0,560,2096,
#Deleted in new
chr3	160567851	160569248	chr3:160567851-160569248	5	+	160567851	160567851	16724991	1	1397,	0,
#Deleted in new
chr3	160584944	160585787	chr3:160584944-160585787	7	+	160584944	160584944	16724991	1	843,	0,
#Deleted in new
chr3	160677158	160678452	chr3:160677158-160678452	3	+	160677346	160677925	789624	1	1294,	0,
#Deleted in new
chr3	160696928	160697060	chr3:160696928-160697060	3	+	160696928	160696928	8553170	1	132,	0,
#Deleted in new
chr3	160753427	160755142	chr3:160753427-160755142	3	-	160753427	160753427	8553170	1	1715,	0,
#Partially deleted in new
chr3	160755601	161022462	chr3:160755601-161022462	1	+	160756308	161022165	789624	3	1106,175,308,	0,206134,266553,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	160756207	161078907	chr3:160756207-161078907	3	+	160756308	161069157	789624	4	500,175,162,10097,	0,205528,309195,312603,
#Partially deleted in new
chr3	160842226	161069856	chr3:160842226-161069856	1	+	160842274	161069157	789624	4	66,175,162,1046,	0,119509,223176,226584,
#Partially deleted in new
chr3	160870597	161069844	chr3:160870597-161069844	0	+	160870597	160870597	789624	6	49,83,175,287,162,1034,	0,11639,91138,165236,194805,198213,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	161083882	161105367	chr3:161083882-161105367	1	-	161085758	161086754	789624	5	2906,95,91,88,133,	0,17256,19544,20436,21352,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	161083882	161105370	chr3:161083882-161105370	3	-	161085758	161086754	789624	4	2906,91,88,136,	0,19544,20436,21352,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	161083882	161105351	chr3:161083882-161105351	1	-	161085758	161086754	789624	8	2906,119,95,93,91,88,111,117,	0,6061,17256,19230,19544,20436,20902,21352,
#Partially deleted in new
chr3	161084982	161104549	chr3:161084982-161104549	1	-	161085758	161086754	789624	5	1806,95,91,88,43,	0,16156,18444,19336,19524,
#Partially deleted in new
chr3	161084990	161101167	chr3:161084990-161101167	1	-	161085758	161086754	789624	3	883,195,29,	0,1603,16148,
#Partially deleted in new
chr3	161085758	161105140	chr3:161085758-161105140	1	-	161085758	161086754	789624	5	1030,95,91,88,356,	0,15380,17668,18560,19026,
#Partially deleted in new
chr3	161086421	161105303	chr3:161086421-161105303	0	-	161086421	161086754	789624	7	367,95,93,91,88,111,69,	0,14717,16691,17005,17897,18363,18813,
#Partially deleted in new
chr3	161086592	161104950	chr3:161086592-161104950	0	-	161086592	161086754	789624	4	196,91,88,166,	0,16834,17726,18192,
#Partially deleted in new
chr3	161086630	161105261	chr3:161086630-161105261	0	-	161086630	161086754	789624	6	158,95,93,91,88,27,	0,14508,16482,16796,17688,18604,
#Partially deleted in new
chr3	161086769	161105384	chr3:161086769-161105384	0	-	161086769	161086769	8553170	6	19,95,91,88,111,150,	0,14369,16657,17549,18015,18465,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	161090038	161105267	chr3:161090038-161105267	0	-	161090038	161090038	8553170	7	24,95,93,91,148,88,33,	0,11100,13074,13388,13919,14280,15196,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	161101163	161105305	chr3:161101163-161105305	0	-	161101163	161101163	8553170	6	70,91,148,88,111,71,	0,2263,2794,3155,3621,4071,
#Partially deleted in new
chr3	161103141	161105245	chr3:161103141-161105245	0	-	161103141	161103141	8553170	4	64,91,88,243,	0,285,1177,1861,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	161104695	161233416	chr3:161104695-161233416	2	+	161222013	161233416	789624	6	190,85,64,135,97,18,	0,52275,117298,120234,122551,128703,
#Partially deleted in new
chr3	161104821	161234836	chr3:161104821-161234836	0	+	161222013	161234836	789624	6	60,64,135,97,81,110,	0,117172,120108,122425,128577,129905,
#Partially deleted in new
chr3	161221261	161238191	chr3:161221261-161238191	0	+	161222013	161238191	789624	8	70,64,135,97,81,129,91,79,	0,732,3668,5985,12137,13465,13860,16851,
#Partially deleted in new
chr3	161221287	161234905	chr3:161221287-161234905	0	+	161221287	161221287	8553170	6	44,64,135,97,81,179,	0,706,3642,5959,12111,13439,
#Partially deleted in new
chr3	161221289	161252307	chr3:161221289-161252307	1	+	161222013	161250910	789624	16	120,64,135,97,81,129,91,79,97,118,146,113,73,107,71,1528,	0,704,3640,5957,12109,13437,13832,16823,17440,19756,21218,25046,25968,28164,28966,29490,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	161221307	161253532	chr3:161221307-161253532	1	+	161222013	161252866	789624	17	102,64,135,97,81,129,91,79,97,118,146,113,73,107,71,111,764,	0,686,3622,5939,12091,13419,13814,16805,17422,19738,21200,25028,25950,28146,28948,29472,31461,
#Partially deleted in new
chr3	161221323	161238191	chr3:161221323-161238191	0	+	161222013	161238191	789624	8	401,64,135,97,81,129,91,79,	0,670,3606,5923,12075,13403,13798,16789,
#Partially deleted in new
chr3	161221556	161234855	chr3:161221556-161234855	0	+	161222013	161234855	789624	6	179,64,135,97,81,129,	0,437,3373,5690,11842,13170,
#Partially deleted in new
chr3	161221558	161252004	chr3:161221558-161252004	1	+	161222013	161250910	789624	15	499,135,97,81,129,91,79,97,118,146,113,73,107,71,1225,	0,3371,5688,11840,13168,13563,16554,17171,19487,20949,24777,25699,27895,28697,29221,
#Deleted in new
chr3	161222910	161223147	chr3:161222910-161223147	7	-	161222910	161222910	16724991	1	237,	0,
#Partially deleted in new
chr3	161224929	161235331	chr3:161224929-161235331	0	+	161224929	161224929	8553170	5	89,97,81,129,210,	0,2317,8469,9797,10192,
#Deleted in new
chr3	161324912	161326219	chr3:161324912-161326219	7	-	161324912	161324912	16724991	1	1307,	0,
#Deleted in new
chr3	161328923	161330238	chr3:161328923-161330238	7	-	161328923	161328923	16724991	1	1315,	0,
#Partially deleted in new
chr3	161344791	161372880	chr3:161344791-161372880	3	-	161346092	161346323	789624	3	1564,93,1446,	0,15010,26643,
#Partially deleted in new
chr3	161345774	161371501	chr3:161345774-161371501	1	-	161346092	161346323	789624	4	581,139,93,67,	0,2190,14027,25660,
#Deleted in new
chr3	161346092	161346323	chr3:161346092-161346323	1	-	161346092	161346323	789624	1	231,	0,
#Partially deleted in new
chr3	161359298	161371517	chr3:161359298-161371517	0	-	161359298	161359298	8553170	2	596,83,	0,12136,
#Deleted in new
chr3	161371529	161372821	chr3:161371529-161372821	1	-	161372040	161372733	789624	1	1292,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	161426426	161448242	chr3:161426426-161448242	3	+	161426426	161426426	789624	4	1231,119,96,1399,	0,2918,17174,20417,
#Deleted in new
chr3	161429111	161429613	chr3:161429111-161429613	3	+	161429111	161429111	8553170	2	98,150,	0,352,
#Deleted in new
chr3	161429126	161429597	chr3:161429126-161429597	7	-	161429126	161429126	16724991	1	471,	0,
#Partially deleted in new
chr3	161496807	161503942	chr3:161496807-161503942	3	+	161496807	161503942	789624	4	364,90,63,917,	0,2363,5499,6218,
#Partially deleted in new
chr3	161816908	161821908	chr3:161816908-161821908	3	-	161816908	161816908	8553170	2	271,212,	0,4788,
#Deleted in new
chr3	162486540	162486949	chr3:162486540-162486949	7	-	162486540	162486540	16724991	1	409,	0,
#Deleted in new
chr3	162601626	162601792	chr3:162601626-162601792	7	+	162601626	162601626	16724991	1	166,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	163026395	163232149	chr3:163026395-163232149	3	+	163026395	163026395	8553170	5	103,120,115,55,1441,	0,181579,193682,202302,204313,
#Partially deleted in new
chr3	163115428	163116186	chr3:163115428-163116186	7	+	163115428	163115428	16724991	1	758,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	163127922	163182910	chr3:163127922-163182910	0	-	163127922	163127922	8553170	3	149,201,80,	0,49978,54908,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	163177242	163303301	chr3:163177242-163303301	3	-	163177242	163177242	789624	7	859,98,197,127,80,94,64,	0,5588,9825,22385,24295,101267,125995,
#Partially deleted in new
chr3	163199574	163220141	chr3:163199574-163220141	0	-	163199574	163199574	8553170	5	180,78,80,168,41,	0,299,1963,2507,20526,
#Partially deleted in new
chr3	163199574	163303288	chr3:163199574-163303288	0	-	163199574	163199574	8553170	7	180,78,80,87,124,94,93,	0,299,1963,20526,75621,78935,103621,
#Partially deleted in new
chr3	163199576	163303322	chr3:163199576-163303322	1	-	163199576	163199576	8553170	8	178,78,80,87,110,124,94,85,	0,297,1961,20524,49688,75619,78933,103661,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	163199577	163278573	chr3:163199577-163278573	0	-	163199577	163199577	8553170	6	177,78,80,98,87,64,	0,296,1960,3840,20523,78932,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	163199622	163361563	chr3:163199622-163361563	1	-	163199622	163199622	8553170	8	132,80,98,115,87,94,92,120,	0,1915,3795,8020,20478,78887,137522,161821,
#Partially deleted in new
chr3	163219059	163303317	chr3:163219059-163303317	0	-	163219059	163219059	8553170	5	118,87,124,94,80,	0,1041,56136,59450,84178,
#Partially deleted in new
chr3	163219915	163303315	chr3:163219915-163303315	0	-	163219915	163219915	8553170	4	272,124,94,78,	0,55280,58594,83322,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	163470204	163470266	chr3:163470204-163470266	3	-	163470204	163470204	8553170	1	62,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	163475066	163479365	chr3:163475066-163479365	3	+	163475066	163475066	8553170	2	85,664,	0,3635,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	164001605	164002465	chr3:164001605-164002465	7	-	164001605	164001605	16724991	1	860,	0,
#Partially deleted in new
chr3	164171470	164171556	chr3:164171470-164171556	3	-	164171470	164171470	5263520	1	86,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	164670877	164686076	chr3:164670877-164686076	3	-	164670877	164670877	8553170	4	354,85,84,53,	0,12939,14321,15146,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	164714094	164731036	chr3:164714094-164731036	0	-	164714094	164714094	8553170	2	388,165,	0,16777,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	164714100	164831480	chr3:164714100-164831480	3	-	164714100	164714100	789624	4	382,220,169,67,	0,3471,16771,117313,
#Partially deleted in new
chr3	164978897	165078495	chr3:164978897-165078495	3	-	164979361	165076012	0	48	533,168,50,89,125,57,85,149,117,35,134,139,88,117,63,111,129,126,113,97,169,155,207,156,171,50,89,125,57,85,155,117,172,118,85,114,120,132,126,113,100,172,152,110,118,137,118,63,	0,3345,4104,8240,12455,13279,13415,15359,17637,17840,19642,27918,29013,30381,34082,36225,37054,38650,38863,39072,40704,42331,44672,51814,53624,54497,57491,59002,60180,60989,62042,64161,67943,70229,70893,76296,80065,80270,81004,83473,84544,86363,88442,89824,90180,95633,96997,99535,
#Partially deleted in new
chr3	165068718	165078495	chr3:165068718-165078495	0	-	165074660	165076012	789624	5	113,118,153,118,63,	0,359,5812,7176,9714,
#Deleted in new
chr3	165074424	165076014	chr3:165074424-165076014	0	-	165074424	165074424	8553170	2	243,120,	0,1470,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	165122712	165122823	chr3:165122712-165122823	3	-	165122712	165122712	8553170	1	111,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	165150005	165158062	chr3:165150005-165158062	3	-	165150005	165150005	8553170	2	1788,160,	0,7897,
#Deleted in new
chr3	165186719	165196002	chr3:165186719-165196002	1	-	165187896	165190830	789624	2	4132,423,	0,8860,
#Deleted in new
chr3	165186721	165196852	chr3:165186721-165196852	3	-	165187896	165190830	789624	2	4130,261,	0,9870,
#Deleted in new
chr3	165190342	165197109	chr3:165190342-165197109	0	-	165190342	165190830	789624	2	509,76,	0,6691,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	165206959	165581028	chr3:165206959-165581028	0	+	165206959	165206959	8553170	4	200,113,94,170,	0,175835,253579,373899,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	165206980	165460533	chr3:165206980-165460533	3	+	165206980	165206980	8553170	5	179,54,166,113,82,	0,138491,167278,175814,253471,
#Partially deleted in new
chr3	165772903	165837472	chr3:165772903-165837472	3	-	165773381	165831033	0	4	603,167,1525,159,	0,13241,56613,64410,
#Partially deleted in new
chr3	165772904	165837462	chr3:165772904-165837462	0	-	165828008	165831033	789624	5	602,167,84,1525,149,	0,13240,55081,56612,64409,
#Partially deleted in new
chr3	165773078	165837420	chr3:165773078-165837420	0	-	165773381	165837420	789624	3	428,167,107,	0,13066,64235,
#Partially deleted in new
chr3	165778273	165837420	chr3:165778273-165837420	0	-	165778649	165837420	789624	3	465,167,107,	0,7871,59040,
#Partially deleted in new
chr3	166160020	166160370	chr3:166160020-166160370	7	-	166160020	166160020	16724991	1	350,	0,
#Partially deleted in new
chr3	166160413	166160704	chr3:166160413-166160704	7	-	166160413	166160413	16724991	1	291,	0,
#Partially deleted in new
chr3	166160776	166161119	chr3:166160776-166161119	7	-	166160776	166160776	16724991	1	343,	0,
#Partially deleted in new
chr3	166161202	166161968	chr3:166161202-166161968	7	-	166161202	166161202	16724991	1	766,	0,
#Partially deleted in new
chr3	166181312	166181820	chr3:166181312-166181820	7	-	166181312	166181312	16724991	1	508,	0,
#Partially deleted in new
chr3	166293755	166294353	chr3:166293755-166294353	7	+	166293755	166293755	16724991	1	598,	0,
#Partially deleted in new
chr3	166569692	166570763	chr3:166569692-166570763	3	-	166569692	166569692	8553170	2	666,89,	0,982,
#Deleted in new
chr3	166605187	166605455	chr3:166605187-166605455	7	+	166605187	166605187	16724991	1	268,	0,
#Partially deleted in new
chr3	166670028	166670122	chr3:166670028-166670122	3	-	166670028	166670028	8553170	1	94,	0,
#Partially deleted in new
chr3	166691186	166691712	chr3:166691186-166691712	7	+	166691186	166691186	16724991	1	526,	0,
#Partially deleted in new
chr3	166721457	166721610	chr3:166721457-166721610	7	+	166721457	166721457	16724991	1	153,	0,
#Deleted in new
chr3	166811008	166811567	chr3:166811008-166811567	7	+	166811008	166811008	16724991	1	559,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	166835020	166844956	chr3:166835020-166844956	3	-	166835020	166835020	8553170	2	711,78,	0,9858,
#Deleted in new
chr3	166861943	166862110	chr3:166861943-166862110	7	+	166861943	166861943	16724991	1	167,	0,
#Deleted in new
chr3	167065830	167066320	chr3:167065830-167066320	7	+	167065830	167065830	16724991	1	490,	0,
#Partially deleted in new
chr3	167240328	167372988	chr3:167240328-167372988	1	-	167240792	167372901	789624	19	591,139,258,117,154,308,143,80,101,110,121,175,159,96,110,49,91,114,155,	0,2176,41909,48538,57976,65314,73645,75421,76676,77159,81788,87613,93498,110091,119541,120346,125557,128132,132505,
#Partially deleted in new
chr3	167240328	167372988	chr3:167240328-167372988	1	-	167240792	167368555	789624	19	591,139,258,154,308,143,80,101,110,121,175,159,96,110,49,91,114,117,155,	0,2176,41909,57976,65314,73645,75421,76676,77159,81788,87613,93498,110091,119541,120346,125557,128132,128359,132505,
#Partially deleted in new
chr3	167240631	167282442	chr3:167240631-167282442	0	-	167282306	167282442	789624	4	288,139,86,205,	0,1873,11494,41606,
#Partially deleted in new
chr3	167240637	167282572	chr3:167240637-167282572	0	-	167240637	167240637	8553170	3	282,139,335,	0,1867,41600,
#Partially deleted in new
chr3	167317004	167379794	chr3:167317004-167379794	0	-	167317004	167317004	8553170	2	101,157,	0,62633,
#Partially deleted in new
chr3	167350456	167380297	chr3:167350456-167380297	0	-	167350456	167372901	789624	8	59,110,49,91,114,117,155,51,	0,9413,10218,15429,18004,22377,29181,29790,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	167368455	167381346	chr3:167368455-167381346	0	-	167368455	167368455	8553170	5	119,117,155,159,23,	0,4378,11182,11791,12868,
#Partially deleted in new
chr3	167441788	167474132	chr3:167441788-167474132	1	-	167442108	167471834	789624	9	397,90,87,98,193,195,231,257,130,	0,4603,7527,11147,23417,23690,25266,29799,32214,
#Partially deleted in new
chr3	167441788	167479004	chr3:167441788-167479004	3	-	167442108	167471834	789624	10	397,90,87,98,193,195,231,257,130,159,	0,4603,7527,11147,23417,23690,25266,29799,32214,37057,
#Partially deleted in new
chr3	167441788	167474132	chr3:167441788-167474132	1	-	167442108	167473756	789624	10	397,90,87,98,193,195,231,257,91,130,	0,4603,7527,11147,23417,23690,25266,29799,31948,32214,
#Partially deleted in new
chr3	167441913	167473827	chr3:167441913-167473827	1	-	167442108	167471834	789624	9	272,90,87,98,193,195,231,257,91,	0,4478,7402,11022,23292,23565,25141,29674,31823,
#Partially deleted in new
chr3	167442064	167471903	chr3:167442064-167471903	1	-	167442108	167471834	789624	8	121,90,87,98,193,195,231,316,	0,4327,7251,10871,23141,23414,24990,29523,
#Partially deleted in new
chr3	167442066	167447005	chr3:167442066-167447005	0	-	167442066	167442066	8553170	2	119,614,	0,4325,
#Partially deleted in new
chr3	167465533	167474026	chr3:167465533-167474026	0	-	167465533	167471834	789624	5	140,231,257,91,24,	0,1521,6054,8203,8469,
#Partially deleted in new
chr3	167465634	167471839	chr3:167465634-167471839	0	-	167465634	167471834	789624	3	39,186,252,	0,1420,5953,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	167469257	167471844	chr3:167469257-167471844	0	-	167469257	167469257	8553170	2	324,257,	0,2330,
#Partially deleted in new
chr3	167478683	167653501	chr3:167478683-167653501	3	-	167478877	167604403	789624	15	313,147,110,170,198,188,165,99,131,116,165,234,149,168,241,	0,21469,26623,43631,49136,50368,52431,54195,58186,75999,81380,97234,123443,125617,174577,
#Partially deleted in new
chr3	167478686	167621643	chr3:167478686-167621643	0	-	167478877	167621643	789624	15	310,147,110,71,188,165,99,131,149,165,234,149,168,175,177,	0,21466,26620,43628,50365,52428,54192,58183,75963,81377,97231,123440,125614,141742,142780,
#Partially deleted in new
chr3	167478851	167653943	chr3:167478851-167653943	1	-	167478877	167653425	789624	19	145,147,110,170,198,188,165,99,131,116,165,234,149,168,175,177,441,239,110,	0,21301,26455,43463,48968,50200,52263,54027,58018,75831,81212,97066,123275,125449,141577,142615,148000,174409,174982,
#Partially deleted in new
chr3	167522331	167531189	chr3:167522331-167531189	0	-	167522331	167531189	789624	3	153,188,75,	0,6720,8783,
#Partially deleted in new
chr3	167532882	167653925	chr3:167532882-167653925	0	-	167604447	167653425	789624	7	95,131,234,149,168,239,92,	0,3987,43035,69244,71418,120378,120951,
#Partially deleted in new
chr3	167554772	167653978	chr3:167554772-167653978	0	-	167554772	167653425	789624	4	26,165,239,145,	0,5291,98488,99061,
#Partially deleted in new
chr3	167621468	167653940	chr3:167621468-167653940	0	-	167621468	167653425	789624	3	175,239,107,	0,31792,32365,
#Partially deleted in new
chr3	167627132	167653880	chr3:167627132-167653880	0	-	167627132	167627132	8553170	4	160,124,239,47,	0,6276,26128,26701,
#Partially deleted in new
chr3	167683297	167734826	chr3:167683297-167734826	3	-	167684307	167720157	0	9	1092,83,79,127,118,54,212,137,165,	0,3936,4317,12298,13711,21544,36764,50916,51364,
#Partially deleted in new
chr3	167683909	167734939	chr3:167683909-167734939	1	-	167684307	167720157	0	9	480,83,79,127,118,54,212,73,134,	0,3324,3705,11686,13099,20932,36152,41491,50896,
#Partially deleted in new
chr3	167683911	167734930	chr3:167683911-167734930	1	-	167684307	167720157	0	8	478,83,79,127,118,54,212,125,	0,3322,3703,11684,13097,20930,36150,50894,
#Partially deleted in new
chr3	167684113	167725477	chr3:167684113-167725477	1	-	167684307	167697087	789624	7	276,83,79,127,118,54,77,	0,3120,3501,11482,12895,20728,41287,
#Partially deleted in new
chr3	167684241	167734544	chr3:167684241-167734544	1	-	167684307	167720157	0	8	148,83,79,127,118,54,212,113,	0,2992,3373,11354,12767,20600,35820,50190,
#Partially deleted in new
chr3	167684255	167734892	chr3:167684255-167734892	1	-	167684307	167720157	0	9	134,83,79,127,118,54,212,132,87,	0,2978,3359,11340,12753,20586,35806,49958,50550,
#Partially deleted in new
chr3	167684338	167734510	chr3:167684338-167734510	0	-	167684338	167720157	789624	9	51,83,79,127,118,54,212,73,52,	0,2895,3276,11257,12670,20503,35723,41062,50120,
#Partially deleted in new
chr3	167687214	167734482	chr3:167687214-167734482	1	-	167687229	167720157	789624	7	102,79,127,118,54,212,24,	0,400,8381,9794,17627,32847,47244,
#Partially deleted in new
chr3	167687221	167734851	chr3:167687221-167734851	1	-	167687229	167720157	789624	8	95,79,127,118,54,212,33,46,	0,393,8374,9787,17620,32840,46992,47584,
#Partially deleted in new
chr3	167687222	167720098	chr3:167687222-167720098	0	-	167687285	167720098	789624	5	94,127,118,54,37,	0,8373,9786,17619,32839,
#Partially deleted in new
chr3	167687648	167734517	chr3:167687648-167734517	0	-	167687648	167720157	789624	7	45,127,118,54,212,73,86,	0,7947,9360,17193,32413,37752,46783,
#Partially deleted in new
chr3	167687686	167734836	chr3:167687686-167734836	0	-	167687686	167720157	789624	7	7,127,118,54,212,137,31,	0,7909,9322,17155,32375,46527,47119,
#Deleted in new
chr3	167694354	167694642	chr3:167694354-167694642	7	-	167694354	167694354	16724991	1	288,	0,
#Partially deleted in new
chr3	167695595	167734821	chr3:167695595-167734821	0	-	167695595	167695595	8553170	5	127,118,54,212,608,	0,1413,9246,24466,38618,
#Partially deleted in new
chr3	167695608	167734863	chr3:167695608-167734863	0	-	167697948	167720157	789624	7	114,118,128,54,212,73,58,	0,1400,2242,9233,24453,29792,39197,
#Deleted in new
chr3	167697006	167697955	chr3:167697006-167697955	0	-	167697006	167697006	8553170	2	120,105,	0,844,
#Partially deleted in new
chr3	167697039	167734832	chr3:167697039-167734832	0	-	167697039	167720157	789624	6	87,54,212,73,132,27,	0,7802,23022,28361,37174,37766,
#Partially deleted in new
chr3	167704557	167734929	chr3:167704557-167734929	0	-	167704557	167704557	8553170	3	338,212,124,	0,15504,30248,
#Partially deleted in new
chr3	167720204	167730976	chr3:167720204-167730976	0	-	167720204	167720204	8553170	3	69,73,274,	0,5196,10498,
#Partially deleted in new
chr3	167735242	167790602	chr3:167735242-167790602	0	+	167789128	167790602	789624	3	83,268,231,	0,53868,55129,
#Partially deleted in new
chr3	167735429	167825568	chr3:167735429-167825568	3	+	167789128	167825323	0	9	394,268,231,195,205,98,87,90,322,	0,53681,54942,57160,59190,71814,87556,89043,89817,
#Partially deleted in new
chr3	167735722	167825566	chr3:167735722-167825566	1	+	167789128	167825323	0	9	413,268,231,195,205,98,87,90,320,	0,53388,54649,56867,58897,71521,87263,88750,89524,
#Partially deleted in new
chr3	167735724	167794679	chr3:167735724-167794679	0	+	167789128	167794679	789624	5	88,268,231,195,60,	0,53386,54647,56865,58895,
#Partially deleted in new
chr3	167800045	167825562	chr3:167800045-167825562	0	+	167800045	167800045	8553170	5	77,98,87,90,316,	0,7198,22940,24427,25201,
#Partially deleted in new
chr3	167807237	167825560	chr3:167807237-167825560	0	+	167807237	167825323	789624	4	104,87,90,314,	0,15748,17235,18009,
#Partially deleted in new
chr3	167822935	167825560	chr3:167822935-167825560	0	+	167822935	167822935	8553170	3	137,90,314,	0,1537,2311,
#Partially deleted in new
chr3	167864772	167876917	chr3:167864772-167876917	5	+	167864772	167864772	16724991	2	34,423,	0,11722,
#Deleted in new
chr3	167864848	167866614	chr3:167864848-167866614	4	+	167864848	167864848	16724991	2	71,489,	0,1277,
#Partially deleted in new
chr3	167864855	167920746	chr3:167864855-167920746	4	+	167864855	167864855	16724991	15	64,51,46,75,65,75,166,149,145,90,119,144,95,121,182,	0,12817,14064,15465,18332,24004,28698,31080,38450,41007,47930,49971,50205,52492,55709,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	167866499	167870977	chr3:167866499-167870977	3	-	167866499	167866499	8553170	3	388,58,112,	0,3757,4366,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	167866634	167883382	chr3:167866634-167883382	4	+	167866634	167866634	16724991	7	152,62,68,63,46,75,195,	0,234,4270,11038,12285,13686,16553,
#Deleted in new
chr3	167888413	167888715	chr3:167888413-167888715	7	+	167888413	167888413	16724991	1	302,	0,
#Partially deleted in new
chr3	167895947	167924011	chr3:167895947-167924011	7	+	167895947	167895947	16724991	7	137,145,90,119,143,93,1623,	0,7358,9915,16838,19113,25996,26441,
#Partially deleted in new
chr3	167895955	167922973	chr3:167895955-167922973	4	+	167895955	167895955	16724991	8	129,145,193,119,143,227,93,585,	0,7350,9907,16830,19105,24609,25988,26433,
#Partially deleted in new
chr3	167895966	167914639	chr3:167895966-167914639	4	+	167895966	167895966	16724991	5	118,145,90,119,157,	0,7339,9896,16819,18516,
#Partially deleted in new
chr3	167895969	167920753	chr3:167895969-167920753	4	+	167895969	167895969	16724991	8	115,145,90,119,143,198,62,189,	0,7336,9893,16816,19091,21329,23399,24595,
#Partially deleted in new
chr3	167896073	167920676	chr3:167896073-167920676	5	+	167896073	167896073	16724991	7	11,145,90,119,143,198,112,	0,7232,9789,16712,18987,21225,24491,
#Partially deleted in new
chr3	167903326	167915031	chr3:167903326-167915031	4	+	167903326	167903326	16724991	4	124,90,119,205,	0,2536,9459,11500,
#Partially deleted in new
chr3	167903397	167922642	chr3:167903397-167922642	4	+	167903397	167903397	16724991	4	53,90,93,254,	0,2465,18546,18991,
#Deleted in new
chr3	167915060	167920749	chr3:167915060-167920749	4	+	167915060	167915060	16724991	3	95,154,185,	0,696,5504,
#Partially deleted in new
chr3	167915138	167922630	chr3:167915138-167922630	4	+	167915138	167915138	16724991	4	65,154,93,242,	0,618,6805,7250,
#Deleted in new
chr3	167956310	167956616	chr3:167956310-167956616	7	-	167956310	167956310	16724991	1	306,	0,
#Deleted in new
chr3	167958743	167959082	chr3:167958743-167959082	7	+	167958743	167958743	16724991	1	339,	0,
#Partially deleted in new
chr3	168008676	168095975	chr3:168008676-168095975	3	-	168010268	168095285	789624	16	1742,81,69,168,110,80,257,333,159,84,83,151,54,50,75,877,	0,2066,15849,16251,19051,20546,21103,23843,28159,32109,32715,34702,36151,38273,39614,86422,
#Partially deleted in new
chr3	168010234	168095344	chr3:168010234-168095344	1	-	168010268	168095285	789624	15	184,81,69,168,110,80,257,333,159,83,151,54,50,75,246,	0,508,14291,14693,17493,18988,19545,22285,26601,31157,33144,34593,36715,38056,84864,
#Partially deleted in new
chr3	168041117	168044881	chr3:168041117-168044881	0	-	168041117	168041117	8553170	3	357,151,54,	0,2261,3710,
#Partially deleted in new
chr3	168249521	168314157	chr3:168249521-168314157	5	+	168249521	168249521	16724991	3	506,135,87,	0,59783,64549,
#Partially deleted in new
chr3	168249660	168519636	chr3:168249660-168519636	4	+	168249660	168249660	16724991	3	367,135,101,	0,59644,269875,
#Partially deleted in new
chr3	168249664	168519621	chr3:168249664-168519621	4	+	168249664	168249664	16724991	4	363,135,106,86,	0,59640,64406,269871,
#Partially deleted in new
chr3	168249940	168821335	chr3:168249940-168821335	7	+	168249940	168249940	16724991	12	87,135,97,104,121,121,137,121,200,133,166,141,	0,59365,62304,64125,395308,459322,552958,557587,560266,562416,567690,571254,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	168475197	168475388	chr3:168475197-168475388	3	+	168475197	168475197	8553170	1	191,	0,
#Partially deleted in new
chr3	168519606	168807584	chr3:168519606-168807584	4	+	168519606	168519606	16724991	7	34,123,123,120,148,138,56,	0,125643,189657,272595,274408,283294,287922,
#Deleted in new
chr3	168551853	168551949	chr3:168551853-168551949	3	+	168551853	168551853	5263520	1	96,	0,
#Deleted in new
chr3	168666558	168667423	chr3:168666558-168667423	7	+	168666558	168666558	16724991	1	865,	0,
#Deleted in new
chr3	168792140	168794114	chr3:168792140-168794114	4	+	168792140	168792140	16724991	2	181,100,	0,1874,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	168807552	168830599	chr3:168807552-168830599	5	+	168807552	168807552	16724991	7	99,121,195,132,135,123,1522,	0,2166,2655,4801,13640,17250,21525,
#Partially deleted in new
chr3	168809775	168824985	chr3:168809775-168824985	4	+	168809775	168809775	16724991	5	64,195,132,135,183,	0,432,2578,11417,15027,
#Deleted in new
chr3	168809810	168812818	chr3:168809810-168812818	4	+	168809810	168809810	16724991	3	29,195,465,	0,397,2543,
#Partially deleted in new
chr3	168812294	168829622	chr3:168812294-168829622	4	+	168812294	168812294	16724991	4	191,135,123,545,	0,8898,12508,16783,
#Partially deleted in new
chr3	168812294	168824983	chr3:168812294-168824983	4	+	168812294	168812294	16724991	3	191,135,181,	0,8898,12508,
#Partially deleted in new
chr3	168812294	168824985	chr3:168812294-168824985	4	+	168812294	168812294	16724991	3	191,135,183,	0,8898,12508,
#Partially deleted in new
chr3	168821189	168829531	chr3:168821189-168829531	4	+	168821189	168821189	16724991	3	138,123,454,	0,3613,7888,
#Partially deleted in new
chr3	168858658	168859130	chr3:168858658-168859130	7	-	168858658	168858658	16724991	1	472,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	168903365	168921996	chr3:168903365-168921996	3	+	168903365	168903365	789624	4	175,127,143,265,	0,4921,7306,18366,
#Partially deleted in new
chr3	168927474	168927919	chr3:168927474-168927919	3	+	168927474	168927474	8553170	1	445,	0,
#Partially deleted in new
chr3	168928168	168928598	chr3:168928168-168928598	3	+	168928168	168928168	8553170	1	430,	0,
#Deleted in new
chr3	169003073	169005466	chr3:169003073-169005466	3	+	169003073	169003073	8553170	2	121,308,	0,2085,
#Partially deleted in new
chr3	169083498	169146305	chr3:169083498-169146305	1	-	169084908	169144999	0	17	1545,184,237,145,170,78,167,27,88,1357,157,148,217,103,135,62,80,	0,5501,6501,9459,11577,17386,18561,24427,29288,31884,37557,39081,44345,47930,60199,61498,62727,
#Partially deleted in new
chr3	169083498	169146305	chr3:169083498-169146305	1	-	169084908	169131477	0	16	1545,184,237,145,170,78,167,27,88,1357,154,148,217,103,135,80,	0,5501,6501,9459,11577,17386,18561,24427,29288,31884,37557,39081,44345,47930,60199,62727,
#Partially deleted in new
chr3	169083506	169147734	chr3:169083506-169147734	1	-	169084908	169131477	0	15	1537,184,237,145,170,78,167,88,1357,154,148,217,103,135,1012,	0,5493,6493,9451,11569,17378,18553,29280,31876,37549,39073,44337,47922,60191,63216,
#Partially deleted in new
chr3	169084743	169146305	chr3:169084743-169146305	1	-	169084908	169131477	789624	16	300,184,237,145,170,78,167,27,88,1357,157,148,217,103,135,80,	0,4256,5256,8214,10332,16141,17316,23182,28043,30639,36312,37836,43100,46685,58954,61482,
#Partially deleted in new
chr3	169084760	169663470	chr3:169084760-169663470	3	-	169084908	169663372	0	16	283,184,237,145,170,78,167,88,1357,154,148,217,103,135,338,135,	0,4239,5239,8197,10315,16124,17299,28026,30622,36295,37819,43083,46668,58937,296426,578575,
#Partially deleted in new
chr3	169084761	169146675	chr3:169084761-169146675	1	-	169084908	169131477	0	16	282,184,237,145,170,78,167,27,88,1357,154,148,217,103,135,199,	0,4238,5238,8196,10314,16123,17298,23164,28025,30621,36294,37818,43082,46667,58936,61715,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	169084829	169133970	chr3:169084829-169133970	1	-	169086547	169131477	789624	15	214,53,184,237,145,170,78,167,88,1357,154,148,217,103,59,	0,1683,4170,5170,8128,10246,16055,17230,27957,30553,36226,37750,43014,46599,49082,
#Partially deleted in new
chr3	169084873	169146288	chr3:169084873-169146288	1	-	169084908	169131477	789624	17	170,184,237,145,170,78,167,27,88,1357,157,148,217,103,135,62,63,	0,4126,5126,8084,10202,16011,17186,23052,27913,30509,36182,37706,42970,46555,58824,60123,61352,
#Deleted in new
chr3	169112787	169128034	chr3:169112787-169128034	0	-	169112787	169128034	789624	5	87,385,154,148,191,	0,2595,8268,9792,15056,
#Deleted in new
chr3	169120887	169122672	chr3:169120887-169122672	0	-	169120887	169120887	8553170	2	325,93,	0,1692,
#Partially deleted in new
chr3	169122617	169146568	chr3:169122617-169146568	0	-	169122617	169131477	789624	5	110,217,103,135,73,	0,5226,8811,21080,23878,
#Partially deleted in new
chr3	169122682	169146288	chr3:169122682-169146288	0	-	169122682	169131477	789624	5	45,217,103,135,1292,	0,5161,8746,21015,22314,
#Partially deleted in new
chr3	169122682	169146288	chr3:169122682-169146288	0	-	169122682	169131477	789624	6	45,217,103,135,62,971,	0,5161,8746,21015,22314,22635,
#Partially deleted in new
chr3	169122682	169146288	chr3:169122682-169146288	0	-	169122682	169131477	789624	6	45,217,103,135,62,535,	0,5161,8746,21015,22314,23071,
#Partially deleted in new
chr3	169127906	169146539	chr3:169127906-169146539	0	-	169127906	169131477	789624	5	154,103,125,135,63,	0,3522,5443,15791,18570,
#Partially deleted in new
chr3	169128023	169269238	chr3:169128023-169269238	0	-	169128023	169131477	789624	4	37,103,135,104,	0,3405,15674,141111,
#Deleted in new
chr3	169128044	169131880	chr3:169128044-169131880	0	-	169128044	169131477	789624	2	16,452,	0,3384,
#Partially deleted in new
chr3	169149481	169663618	chr3:169149481-169663618	0	-	169149481	169149481	8553170	3	274,338,283,	0,231705,513854,
#Partially deleted in new
chr3	169447866	169477052	chr3:169447866-169477052	3	+	169447866	169447866	789624	5	69,179,67,53,167,	0,16077,19167,22278,29019,
#Deleted in new
chr3	169483670	169484080	chr3:169483670-169484080	7	-	169483670	169483670	16724991	1	410,	0,
#Partially deleted in new
chr3	169613509	169623951	chr3:169613509-169623951	3	-	169613509	169613509	8553170	3	312,152,49,	0,1329,10393,
#Partially deleted in new
chr3	169709294	169709765	chr3:169709294-169709765	7	+	169709294	169709294	16724991	1	471,	0,
#Deleted in new
chr3	169764519	169765060	chr3:169764519-169765060	3	-	169764519	169764519	8553170	1	541,	0,
#Deleted in new
chr3	169764609	169765047	chr3:169764609-169765047	3	-	169764609	169764609	789624	1	438,	0,
#Partially deleted in new
chr3	169766920	169769895	chr3:169766920-169769895	3	-	169767431	169769520	789624	2	1430,575,	0,2400,
#Deleted in new
chr3	169769648	169772043	chr3:169769648-169772043	3	+	169769648	169769648	8553170	2	413,430,	0,1965,
#Partially deleted in new
chr3	169772830	169789181	chr3:169772830-169789181	3	+	169774295	169786678	0	8	632,297,794,160,179,84,87,2766,	0,1434,5937,7759,9634,10646,11791,13585,
#Partially deleted in new
chr3	169773404	169787502	chr3:169773404-169787502	0	+	169774295	169778893	0	8	58,297,678,160,179,84,87,1087,	0,860,5479,7185,9060,10072,11217,13011,
#Partially deleted in new
chr3	169773426	169787544	chr3:169773426-169787544	1	+	169774295	169786678	0	9	36,67,297,794,160,179,84,87,1129,	0,604,838,5341,7163,9038,10050,11195,12989,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	169774264	169789716	chr3:169774264-169789716	1	+	169774295	169786678	0	6	297,794,160,179,84,3301,	0,4503,6325,8200,9212,12151,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	169777191	169780334	chr3:169777191-169780334	3	-	169777191	169777191	8553170	1	3143,	0,
#Partially deleted in new
chr3	169779288	169784676	chr3:169779288-169784676	0	+	169779288	169783749	789624	6	273,160,179,84,129,55,	0,1301,3176,4188,4441,5333,
#Partially deleted in new
chr3	169793427	169812664	chr3:169793427-169812664	1	-	169793634	169812548	789624	11	411,127,156,155,96,129,84,65,122,118,255,	0,2057,2786,3317,7231,10625,13420,13998,14160,15200,18982,
#Partially deleted in new
chr3	169793472	169812986	chr3:169793472-169812986	3	-	169793634	169812548	789624	10	366,127,156,155,129,84,65,122,118,577,	0,2012,2741,3272,10580,13375,13953,14115,15155,18937,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	169793472	169812690	chr3:169793472-169812690	0	-	169793472	169793472	8553170	9	2897,155,96,129,84,65,122,118,121,	0,3272,7186,10580,13375,13953,14115,15155,19097,
#Partially deleted in new
chr3	169793472	169812932	chr3:169793472-169812932	1	-	169793634	169808701	789624	11	366,127,156,155,96,129,84,65,122,118,363,	0,2012,2741,3272,7186,10580,13375,13953,14115,15155,19097,
#Partially deleted in new
chr3	169793484	169796346	chr3:169793484-169796346	0	-	169793484	169793484	8553170	2	354,133,	0,2729,
#Partially deleted in new
chr3	169793487	169796901	chr3:169793487-169796901	0	-	169793487	169793487	8553170	4	351,127,66,157,	0,1997,2726,3257,
#Deleted in new
chr3	169793494	169793966	chr3:169793494-169793966	3	+	169793494	169793494	8553170	1	472,	0,
#Partially deleted in new
chr3	169793526	169796899	chr3:169793526-169796899	0	-	169793822	169796899	789624	2	312,155,	0,3218,
#Deleted in new
chr3	169794961	169796213	chr3:169794961-169796213	3	+	169794961	169794961	8553170	1	1252,	0,
#Partially deleted in new
chr3	169795779	169812525	chr3:169795779-169812525	0	-	169795779	169795779	8553170	9	590,155,96,129,84,65,122,118,116,	0,965,4879,8273,11068,11646,11808,12848,16630,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	169796164	169808079	chr3:169796164-169808079	0	-	169796164	169796164	8553170	8	205,155,96,129,84,65,122,57,	0,580,4494,7888,10683,11261,11423,11858,
#Deleted in new
chr3	169796459	169797038	chr3:169796459-169797038	0	-	169796459	169796459	8553170	1	579,	0,
#Partially deleted in new
chr3	169796744	169812514	chr3:169796744-169812514	0	-	169796744	169796744	8553170	7	155,96,129,84,65,122,105,	0,3914,7308,10103,10681,10843,15665,
#Partially deleted in new
chr3	169803970	169808719	chr3:169803970-169808719	0	-	169803970	169803970	8553170	5	211,84,65,122,92,	0,2877,3455,3617,4657,
#Partially deleted in new
chr3	169821921	169837775	chr3:169821921-169837775	3	+	169821921	169837631	789624	5	1020,174,139,197,297,	0,6837,8570,11065,15557,
#Partially deleted in new
chr3	169839178	169869865	chr3:169839178-169869865	3	-	169839981	169869807	789624	9	1135,168,168,168,168,168,168,144,233,	0,8941,12440,15634,17157,17526,21382,22491,30454,
#Partially deleted in new
chr3	169839240	169869930	chr3:169839240-169869930	1	-	169839981	169869807	789624	8	1073,168,168,168,168,168,144,298,	0,8879,12378,15572,17095,17464,22429,30392,
#Partially deleted in new
chr3	169839970	169869833	chr3:169839970-169869833	1	-	169840326	169869807	789624	9	361,168,168,168,168,168,168,144,201,	0,8149,11648,14842,16365,16734,20590,21699,29662,
#Partially deleted in new
chr3	169853222	169869874	chr3:169853222-169869874	0	-	169853222	169853222	8553170	7	510,168,168,168,168,144,242,	0,1590,3113,3482,7338,8447,16410,
#Partially deleted in new
chr3	169902979	169904260	chr3:169902979-169904260	7	-	169902979	169902979	16724991	1	1281,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	169911571	169939175	chr3:169911571-169939175	1	+	169919498	169938506	789624	9	250,75,127,125,79,629,122,111,858,	0,3795,7886,9642,13486,14981,16885,24767,26746,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	169911571	169939175	chr3:169911571-169939175	3	+	169919498	169938506	789624	9	250,98,127,125,79,629,122,111,858,	0,3795,7886,9642,13486,14981,16885,24767,26746,
#Partially deleted in new
chr3	169915410	169938587	chr3:169915410-169938587	0	+	169919498	169926219	789624	9	31,127,125,79,113,629,122,111,270,	0,4047,5803,9647,10802,11142,13046,20928,22907,
#Deleted in new
chr3	169931997	169933229	chr3:169931997-169933229	7	+	169931997	169931997	16724991	1	1232,	0,
#Partially deleted in new
chr3	169939352	169966240	chr3:169939352-169966240	0	-	169939352	169939352	8553170	2	237,263,	0,26625,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	169943255	169966226	chr3:169943255-169966226	3	-	169943255	169943255	8553170	2	6002,249,	0,22722,
#Deleted in new
chr3	169945986	169946754	chr3:169945986-169946754	7	-	169945986	169945986	16724991	1	768,	0,
#Partially deleted in new
chr3	169949038	169966114	chr3:169949038-169966114	0	-	169949038	169949038	8553170	3	219,688,137,	0,5481,16939,
#Partially deleted in new
chr3	169954226	169966734	chr3:169954226-169966734	1	-	169954226	169954226	789624	2	981,757,	0,11751,
#Deleted in new
chr3	169966634	169968523	chr3:169966634-169968523	0	+	169966634	169966634	8553170	2	224,139,	0,1750,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	169966764	169998373	chr3:169966764-169998373	3	+	169966822	169993063	789624	8	94,109,106,205,93,61,120,5780,	0,8843,10181,15942,16396,19040,21475,25829,
#Partially deleted in new
chr3	169966800	169983253	chr3:169966800-169983253	0	+	169966822	169982643	789624	5	58,109,106,275,93,	0,8807,10145,15836,16360,
#Partially deleted in new
chr3	169966807	169993831	chr3:169966807-169993831	1	+	169966822	169993063	789624	9	51,109,106,205,93,61,120,508,177,	0,8800,10138,15899,16353,18997,21432,25786,26847,
#Partially deleted in new
chr3	169966813	169982857	chr3:169966813-169982857	0	+	169966822	169975618	789624	5	45,97,109,106,151,	0,2473,8794,10132,15893,
#Partially deleted in new
chr3	169966814	169988359	chr3:169966814-169988359	0	+	169966822	169982714	789624	7	44,109,106,252,93,61,120,	0,8793,10131,15845,16346,18990,21425,
#Partially deleted in new
chr3	169966825	169985885	chr3:169966825-169985885	0	+	169966825	169966825	8553170	6	33,109,106,205,93,81,	0,8782,10120,15881,16335,18979,
#Partially deleted in new
chr3	169975450	169982859	chr3:169975450-169982859	0	+	169975450	169975450	8553170	3	266,106,153,	0,1495,7256,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	169978535	169985715	chr3:169978535-169985715	3	-	169978535	169978535	8553170	2	26,320,	0,6860,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	169982868	169983939	chr3:169982868-169983939	0	+	169982868	169982868	8553170	2	43,779,	0,292,
#Partially deleted in new
chr3	169985128	169992721	chr3:169985128-169992721	0	+	169985128	169985128	8553170	4	61,61,120,128,	0,676,3111,7465,
#Partially deleted in new
chr3	170037928	170085403	chr3:170037928-170085403	3	+	170083972	170084989	789624	4	287,129,124,1499,	0,986,41845,45976,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	170038137	170084071	chr3:170038137-170084071	0	+	170083972	170084071	789624	5	78,129,801,124,167,	0,777,38985,41636,45767,
#Partially deleted in new
chr3	170038198	170063151	chr3:170038198-170063151	0	+	170038198	170038198	8553170	3	17,129,719,	0,716,24234,
#Partially deleted in new
chr3	170038203	170077276	chr3:170038203-170077276	0	+	170038203	170038203	8553170	3	267,129,154,	0,711,38919,
#Partially deleted in new
chr3	170038785	170077341	chr3:170038785-170077341	0	+	170038785	170038785	8553170	2	258,219,	0,38337,
#Partially deleted in new
chr3	170049854	170084461	chr3:170049854-170084461	0	+	170083972	170084461	789624	3	50,124,557,	0,29919,34050,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	170057300	170057429	chr3:170057300-170057429	3	+	170057300	170057300	8553170	1	129,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	170057840	170063268	chr3:170057840-170063268	0	+	170057840	170057840	8553170	3	191,560,66,	0,4592,5362,
#Deleted in new
chr3	170062243	170062951	chr3:170062243-170062951	7	+	170062243	170062243	16724991	1	708,	0,
#Partially deleted in new
chr3	170077133	170084237	chr3:170077133-170084237	0	+	170083972	170084237	789624	3	283,124,333,	0,2640,6771,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	170077219	170077971	chr3:170077219-170077971	0	+	170077219	170077219	8553170	2	197,369,	0,383,
#Partially deleted in new
chr3	170079771	170084403	chr3:170079771-170084403	0	+	170083972	170084403	789624	3	126,158,499,	0,3593,4133,
#Partially deleted in new
chr3	170086731	170102899	chr3:170086731-170102899	0	-	170097229	170102899	789624	4	370,213,232,98,	0,10440,15747,16070,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	170087583	170181747	chr3:170087583-170181747	3	-	170097229	170181715	0	15	9801,232,133,115,160,251,154,869,247,99,159,78,156,166,46,	0,14895,15218,19248,25776,29642,35007,41100,48835,57839,61502,83789,84973,91189,94118,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	170087809	170089590	chr3:170087809-170089590	3	+	170087809	170087809	8553170	1	1781,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	170095220	170181733	chr3:170095220-170181733	1	-	170097229	170178916	0	15	2164,232,133,115,160,251,154,869,247,99,159,78,156,166,47,	0,7258,7581,11611,18139,22005,27370,33463,41198,50202,53865,76152,77336,83552,86466,
#Partially deleted in new
chr3	170102566	170181749	chr3:170102566-170181749	1	-	170102640	170181715	789624	13	119,133,115,160,251,154,869,247,99,78,156,166,48,	0,235,4265,10793,14659,20024,26117,33852,42856,68806,69990,76206,79135,
#Partially deleted in new
chr3	170117122	170128807	chr3:170117122-170128807	0	-	170117132	170128807	789624	4	354,154,48,124,	0,5468,11217,11561,
#Partially deleted in new
chr3	170129307	170181730	chr3:170129307-170181730	0	-	170129307	170181715	789624	5	245,61,156,166,29,	0,42082,43249,49465,52394,
#Partially deleted in new
chr3	170129384	170136670	chr3:170129384-170136670	0	-	170129384	170129384	8553170	2	168,252,	0,7034,
#Partially deleted in new
chr3	170136365	170181747	chr3:170136365-170181747	0	-	170145477	170181715	789624	7	300,99,159,61,156,166,46,	0,9057,12720,35024,36191,42407,45336,
#Partially deleted in new
chr3	170136533	170181749	chr3:170136533-170181749	0	-	170136533	170181715	789624	5	132,78,156,166,48,	0,34839,36023,42239,45168,
#Partially deleted in new
chr3	170136595	170181745	chr3:170136595-170181745	0	-	170136595	170181715	789624	7	70,99,159,78,156,166,44,	0,8827,12490,34777,35961,42177,45106,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	170147247	170181728	chr3:170147247-170181728	0	-	170147247	170147247	8553170	5	1997,78,144,166,42,	0,24125,25309,31525,34439,
#Partially deleted in new
chr3	170149133	170181723	chr3:170149133-170181723	0	-	170176895	170178916	789624	6	111,78,156,61,166,37,	0,22239,23423,27731,29639,32553,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	170149844	170149951	chr3:170149844-170149951	3	+	170149844	170149844	8553170	1	107,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	170150606	170181736	chr3:170150606-170181736	0	-	170150606	170150606	8553170	5	103,78,156,166,35,	0,20766,21950,28166,31095,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	170169717	170181733	chr3:170169717-170181733	1	-	170171330	170181715	0	4	1733,156,166,32,	0,2839,9055,11984,
#Partially deleted in new
chr3	170170731	170181747	chr3:170170731-170181747	1	-	170171330	170181715	789624	4	719,144,166,46,	0,1825,8041,10970,
#Partially deleted in new
chr3	170171085	170181733	chr3:170171085-170181733	0	-	170171085	170171085	8553170	4	365,156,166,32,	0,1471,7687,10616,
#Partially deleted in new
chr3	170171262	170172632	chr3:170171262-170172632	0	-	170171262	170171262	8553170	2	188,76,	0,1294,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr3	170222364	170305981	chr3:170222364-170305981	3	+	170222669	170303127	0	18	406,122,90,51,86,141,55,59,177,98,87,136,88,126,80,90,116,2942,	0,12865,37604,41014,45550,48056,50921,52864,57862,58801,59517,62096,69489,71018,73546,74939,76630,80675,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	170244781	170244881	chr3:170244781-170244881	3	+	170244781	170244781	8553170	1	100,	0,
#Partially deleted in new
chr3	170280144	170281238	chr3:170280144-170281238	0	+	170280144	170280144	8553170	2	259,73,	0,1021,
#Partially deleted in new
chr3	170280239	170281537	chr3:170280239-170281537	0	+	170280239	170280239	8553170	2	164,372,	0,926,
#Partially deleted in new
chr3	170281609	170284596	chr3:170281609-170284596	0	+	170281609	170281609	8553170	2	359,136,	0,2851,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	170291641	170305977	chr3:170291641-170305977	0	+	170291641	170291641	8553170	6	300,126,80,90,116,2938,	0,1741,4269,5662,7353,11398,
#Partially deleted in new
chr3	170293331	170303165	chr3:170293331-170303165	0	+	170293331	170293331	8553170	5	177,80,90,116,126,	0,2579,3972,5663,9708,
#Partially deleted in new
chr3	170293346	170297328	chr3:170293346-170297328	0	+	170293346	170293346	8553170	3	162,80,25,	0,2564,3957,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	170345677	170353961	chr3:170345677-170353961	3	+	170345677	170345677	8553170	2	53,416,	0,7868,
#Partially deleted in new
chr3	170357677	170360073	chr3:170357677-170360073	0	+	170357677	170357677	8553170	2	179,375,	0,2021,
#Partially deleted in new
chr3	170357684	170360213	chr3:170357684-170360213	0	+	170357684	170357684	8553170	2	79,515,	0,2014,
#Partially deleted in new
chr3	170357714	170360700	chr3:170357714-170360700	0	+	170360331	170360700	789624	3	49,178,380,	0,1984,2606,
#Partially deleted in new
chr3	170357725	170392748	chr3:170357725-170392748	1	+	170360331	170392417	0	7	38,1731,98,233,242,225,490,	0,1973,23518,26807,32497,33310,34533,
#Partially deleted in new
chr3	170357733	170392947	chr3:170357733-170392947	1	+	170360391	170392417	0	8	30,178,1062,98,233,242,225,689,	0,1965,2634,23510,26799,32489,33302,34525,
#Partially deleted in new
chr3	170358508	170360160	chr3:170358508-170360160	0	+	170358508	170358508	8553170	2	137,462,	0,1190,
#Partially deleted in new
chr3	170359622	170392493	chr3:170359622-170392493	1	+	170360331	170392417	0	6	1807,98,95,242,225,235,	0,21621,24910,30600,31413,32636,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	170359622	170396835	chr3:170359622-170396835	3	+	170360331	170392417	0	6	1807,98,233,242,225,4577,	0,21621,24910,30600,31413,32636,
#Partially deleted in new
chr3	170361211	170391187	chr3:170361211-170391187	0	+	170361211	170390241	789624	4	218,98,242,152,	0,20032,29011,29824,
#Partially deleted in new
chr3	170381275	170385049	chr3:170381275-170385049	0	+	170381275	170381275	8553170	2	66,517,	0,3257,
#Partially deleted in new
chr3	170410511	170418615	chr3:170410511-170418615	3	+	170410511	170410511	8553170	4	262,136,87,179,	0,2285,2641,7925,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	170418864	170434099	chr3:170418864-170434099	1	+	170419066	170432756	789624	3	428,165,1576,	0,4298,13659,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	170418867	170860380	chr3:170418867-170860380	3	+	170419066	170708150	789624	4	425,165,151,398,	0,4295,289176,441115,
#Partially deleted in new
chr3	170418874	170423742	chr3:170418874-170423742	0	+	170418874	170418874	8553170	2	418,580,	0,4288,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	170421217	170434092	chr3:170421217-170434092	0	+	170421217	170421217	8553170	3	120,165,1569,	0,1945,11306,
#Partially deleted in new
chr3	170421244	170503009	chr3:170421244-170503009	0	+	170421244	170421244	8553170	4	93,165,114,199,	0,1918,39054,81566,
#Deleted in new
chr3	170423102	170423162	chr3:170423102-170423162	3	+	170423102	170423102	5263520	1	60,	0,
#Partially deleted in new
chr3	170437464	170454733	chr3:170437464-170454733	2	+	170437464	170437464	8553170	2	156,444,	0,16825,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	170448638	170671497	chr3:170448638-170671497	1	+	170448638	170448638	8553170	4	159,114,103,1324,	0,11660,28132,221535,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	170459583	170586074	chr3:170459583-170586074	3	-	170467054	170526936	789624	8	7794,878,209,147,218,237,456,164,	0,20705,23730,26638,39083,41525,67049,126327,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	170467252	170860993	chr3:170467252-170860993	2	+	170467252	170467252	8553170	4	39,103,151,1011,	0,9518,240791,392730,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	170467281	170755208	chr3:170467281-170755208	0	+	170467281	170467281	789624	6	115,103,151,60,340,820,	0,9489,240762,258278,262074,287107,
#Deleted in new
chr3	170495626	170496636	chr3:170495626-170496636	7	+	170495626	170495626	16724991	1	1010,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	170570089	170586027	chr3:170570089-170586027	0	-	170570089	170570089	8553170	2	356,117,	0,15821,
#Deleted in new
chr3	170653845	170654259	chr3:170653845-170654259	7	-	170653845	170653845	16724991	1	414,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	170656561	170662123	chr3:170656561-170662123	3	+	170656561	170656561	8553170	2	376,2721,	0,2841,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	170740350	170741365	chr3:170740350-170741365	3	-	170740350	170740350	8553170	2	183,80,	0,935,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	170864874	170870483	chr3:170864874-170870483	3	-	170866379	170870167	789624	4	1650,122,93,325,	0,3138,3423,5284,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	170865793	170868181	chr3:170865793-170868181	0	-	170865793	170865793	8553170	2	731,169,	0,2219,
#Partially deleted in new
chr3	170866262	170870195	chr3:170866262-170870195	0	-	170868108	170870167	789624	4	262,189,93,37,	0,1750,2035,3896,
#Partially deleted in new
chr3	170866263	170870033	chr3:170866263-170870033	0	-	170866379	170870033	789624	4	261,122,93,69,	0,1749,2034,3701,
#Partially deleted in new
chr3	170866266	170870208	chr3:170866266-170870208	0	-	170868108	170870167	789624	4	258,189,90,50,	0,1746,2031,3892,
#Partially deleted in new
chr3	170866267	170870195	chr3:170866267-170870195	1	-	170866379	170870167	789624	4	257,122,90,37,	0,1745,2030,3891,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	170888414	170908693	chr3:170888414-170908693	3	-	170893359	170907806	789624	5	5005,132,105,200,151,	0,5877,18574,19227,20128,
#Partially deleted in new
chr3	170893135	170908644	chr3:170893135-170908644	0	-	170893135	170893135	8553170	3	284,132,102,	0,1156,15407,
#Partially deleted in new
chr3	170893215	170908598	chr3:170893215-170908598	1	-	170893359	170907806	789624	4	204,105,200,56,	0,13773,14426,15327,
#Partially deleted in new
chr3	170893348	170908644	chr3:170893348-170908644	1	-	170894335	170907806	789624	5	71,92,105,200,102,	0,943,13640,14293,15194,
#Partially deleted in new
chr3	170894291	170908604	chr3:170894291-170908604	0	-	170894291	170907749	789624	4	132,105,158,62,	0,12697,13350,14251,
#Deleted in new
chr3	170952849	170953897	chr3:170952849-170953897	7	-	170952849	170952849	16724991	1	1048,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	170994869	170995033	chr3:170994869-170995033	3	-	170994869	170994869	8553170	1	164,	0,
#Partially deleted in new
chr3	170996347	171026750	chr3:170996347-171026750	3	-	170997902	171026670	789624	11	1756,204,102,105,188,163,116,125,263,93,95,	0,1845,2717,6228,8937,9595,10800,13610,18121,22183,30308,
#Partially deleted in new
chr3	170996819	171026720	chr3:170996819-171026720	0	-	171007226	171026670	789624	10	1284,204,102,105,188,163,116,263,93,65,	0,1373,2245,5756,8465,9123,10328,17649,21711,29836,
#Partially deleted in new
chr3	170997754	171026743	chr3:170997754-171026743	0	-	171007226	171026670	789624	10	349,204,102,105,188,163,116,125,93,88,	0,438,1310,4821,7530,8188,9393,12203,20776,28901,
#Deleted in new
chr3	171005415	171007470	chr3:171005415-171007470	0	-	171005415	171005415	8553170	2	57,323,	0,1732,
#Partially deleted in new
chr3	171005419	171018623	chr3:171005419-171018623	0	-	171005419	171007240	789624	4	53,163,116,93,	0,523,1728,13111,
#Partially deleted in new
chr3	171061338	171460408	chr3:171061338-171460408	3	-	171063880	171460063	0	33	2626,140,160,150,101,135,144,171,112,165,130,185,24,98,164,107,240,165,189,87,111,205,67,176,79,55,131,91,111,126,57,66,402,	0,4848,5237,7509,9884,18179,20912,22816,23779,26003,32500,40110,45844,46726,49375,62257,64573,67375,76852,78131,79060,96121,99931,105756,113913,115987,127363,129358,133186,149777,166826,308281,398668,
#Partially deleted in new
chr3	171063260	171102072	chr3:171063260-171102072	0	-	171063260	171063260	8553170	12	704,140,160,150,101,135,144,171,112,165,130,624,	0,2926,3315,5587,7962,16257,18990,20894,21857,24081,30578,38188,
#Partially deleted in new
chr3	171063329	171460408	chr3:171063329-171460408	1	-	171063880	171460063	0	31	635,140,160,150,101,135,144,171,112,165,130,185,24,98,164,107,240,189,111,205,67,176,79,55,131,91,111,126,57,66,402,	0,2857,3246,5518,7893,16188,18921,20825,21788,24012,30509,38119,43853,44735,47384,60266,62582,74861,77069,94130,97940,103765,111922,113996,125372,127367,131195,147786,164835,306290,396677,
#Deleted in new
chr3	171063551	171064042	chr3:171063551-171064042	0	-	171063551	171063551	8553170	2	77,360,	0,131,
#Partially deleted in new
chr3	171063880	171460063	chr3:171063880-171460063	1	-	171063880	171460063	0	32	84,140,160,150,101,135,144,171,112,165,130,185,98,164,107,240,165,189,87,111,205,67,176,79,55,131,91,111,126,57,66,57,	0,2306,2695,4967,7342,15637,18370,20274,21237,23461,29958,37568,44184,46833,59715,62031,64833,74310,75589,76518,93579,97389,103214,111371,113445,124821,126816,130644,147235,164284,305739,396126,
#Partially deleted in new
chr3	171063880	171460063	chr3:171063880-171460063	1	-	171063880	171460063	0	32	84,140,160,150,101,135,144,171,112,165,130,185,24,98,164,107,240,165,189,111,205,67,176,79,55,131,91,111,126,57,66,57,	0,2306,2695,4967,7342,15637,18370,20274,21237,23461,29958,37568,43302,44184,46833,59715,62031,64833,74310,76518,93579,97389,103214,111371,113445,124821,126816,130644,147235,164284,305739,396126,
#Partially deleted in new
chr3	171063880	171460063	chr3:171063880-171460063	1	-	171063880	171460063	0	31	84,140,160,150,101,135,144,171,112,165,130,185,98,164,107,240,189,87,111,205,67,176,79,55,131,91,111,126,57,66,57,	0,2306,2695,4967,7342,15637,18370,20274,21237,23461,29958,37568,44184,46833,59715,62031,74310,75589,76518,93579,97389,103214,111371,113445,124821,126816,130644,147235,164284,305739,396126,
#Partially deleted in new
chr3	171063880	171460063	chr3:171063880-171460063	1	-	171063880	171460063	0	31	84,140,160,150,101,135,144,171,112,165,130,185,98,164,107,240,165,189,111,205,67,176,79,55,131,91,111,126,57,66,57,	0,2306,2695,4967,7342,15637,18370,20274,21237,23461,29958,37568,44184,46833,59715,62031,64833,74310,76518,93579,97389,103214,111371,113445,124821,126816,130644,147235,164284,305739,396126,
#Partially deleted in new
chr3	171063880	171460063	chr3:171063880-171460063	1	-	171063880	171460063	0	30	84,140,160,150,101,135,144,171,112,165,130,185,98,164,107,240,189,111,205,67,176,79,55,131,91,111,126,57,66,57,	0,2306,2695,4967,7342,15637,18370,20274,21237,23461,29958,37568,44184,46833,59715,62031,74310,76518,93579,97389,103214,111371,113445,124821,126816,130644,147235,164284,305739,396126,
#Partially deleted in new
chr3	171063880	171460063	chr3:171063880-171460063	1	-	171063880	171460063	0	32	84,140,160,150,101,135,144,171,112,165,130,185,24,98,164,107,240,189,87,111,205,67,176,79,55,131,91,111,126,57,66,57,	0,2306,2695,4967,7342,15637,18370,20274,21237,23461,29958,37568,43302,44184,46833,59715,62031,74310,75589,76518,93579,97389,103214,111371,113445,124821,126816,130644,147235,164284,305739,396126,
#Partially deleted in new
chr3	171066373	171082682	chr3:171066373-171082682	0	-	171066373	171066373	8553170	5	362,150,101,135,432,	0,2474,4849,13144,15877,
#Partially deleted in new
chr3	171066469	171079583	chr3:171066469-171079583	0	-	171066469	171066469	8553170	4	266,140,101,66,	0,2378,4753,13048,
#Partially deleted in new
chr3	171066486	171071406	chr3:171066486-171071406	0	-	171066486	171066486	8553170	3	249,150,184,	0,2361,4736,
#Deleted in new
chr3	171106663	171106759	chr3:171106663-171106759	3	-	171106663	171106663	789624	1	96,	0,
#Partially deleted in new
chr3	171157550	171225711	chr3:171157550-171225711	0	-	171157550	171225635	789624	10	114,67,176,79,55,131,91,111,126,178,	0,3719,9544,17701,19775,31151,33146,36974,53565,67983,
#Partially deleted in new
chr3	171346933	171460405	chr3:171346933-171460405	1	-	171347203	171460063	789624	3	285,66,399,	0,22686,113073,
#Deleted in new
chr3	171439525	171439627	chr3:171439525-171439627	3	+	171439525	171439525	8553170	1	102,	0,
#Deleted in new
chr3	171460611	171462256	chr3:171460611-171462256	3	+	171460611	171460611	8553170	1	1645,	0,
#Partially deleted in new
chr3	171468083	171469633	chr3:171468083-171469633	3	+	171468083	171468083	8553170	2	172,57,	0,1493,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	171504244	171504351	chr3:171504244-171504351	3	-	171504244	171504244	8553170	1	107,	0,
#Partially deleted in new
chr3	171534422	171534615	chr3:171534422-171534615	7	+	171534422	171534422	16724991	1	193,	0,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr3	171600404	171810438	chr3:171600404-171810438	1	-	171603077	171738051	789624	26	2898,118,154,135,50,114,89,111,114,119,129,214,201,111,82,84,150,153,93,59,66,106,146,128,191,40,	0,4894,11874,19981,42435,44505,58808,61655,74095,76310,77161,86966,88271,91927,99340,108350,109155,113488,124291,125613,133039,134460,135087,137127,137487,209994,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	171600404	171602338	chr3:171600404-171602338	0	-	171600404	171600404	8553170	3	254,160,280,	0,642,1654,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr3	171600825	171810494	chr3:171600825-171810494	3	-	171603077	171738051	789624	27	2477,118,154,135,50,114,89,111,114,119,129,114,214,201,111,82,84,150,153,93,59,66,106,146,128,191,96,	0,4473,11453,19560,42014,44084,58387,61234,73674,75889,76740,85859,86545,87850,91506,98919,107929,108734,113067,123870,125192,132618,134039,134666,136706,137066,209573,
#Partially deleted in new
chr3	171611465	171674516	chr3:171611465-171674516	0	-	171611600	171674516	789624	8	169,154,135,50,114,89,111,17,	0,813,8920,31374,33444,47747,50594,63034,
#Partially deleted in new
chr3	171612306	171643154	chr3:171612306-171643154	0	-	171612306	171612306	8553170	3	126,135,315,	0,8079,30533,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	171653241	171677853	chr3:171653241-171677853	0	-	171653241	171653241	8553170	6	1052,89,111,114,119,288,	0,5971,8818,21258,23473,24324,
#Partially deleted in new
chr3	171688694	171708870	chr3:171688694-171708870	0	-	171688694	171688694	8553170	4	182,111,82,116,	0,3637,11050,20060,
#Partially deleted in new
chr3	171713877	171810437	chr3:171713877-171810437	0	-	171713877	171713877	8553170	9	168,93,59,66,106,146,128,191,39,	0,10818,12140,19566,20987,21614,23654,24014,96521,
#Partially deleted in new
chr3	171721353	171737932	chr3:171721353-171737932	0	-	171721353	171721353	8553170	8	192,93,59,66,106,146,128,41,	0,3342,4664,12090,13511,14138,16178,16538,
#Partially deleted in new
chr3	171726003	171810462	chr3:171726003-171810462	0	-	171735623	171738051	789624	6	73,66,106,146,191,64,	0,7440,8861,9488,11888,84395,
#Partially deleted in new
chr3	171735500	171771359	chr3:171735500-171771359	0	-	171735500	171738051	789624	4	137,128,191,165,	0,2031,2391,35694,
#Partially deleted in new
chr3	171735623	171738051	chr3:171735623-171738051	1	-	171735623	171738051	789624	2	14,160,	0,2268,
#Partially deleted in new
chr3	171765128	171771385	chr3:171765128-171771385	0	-	171765128	171765128	8553170	2	367,191,	0,6066,
#Partially deleted in new
chr3	171788566	171810441	chr3:171788566-171810441	0	-	171788566	171788566	8553170	2	969,43,	0,21832,
#Partially deleted in new
chr3	171788580	171810950	chr3:171788580-171810950	0	-	171788580	171788580	8553170	5	955,56,117,316,62,	0,1065,1260,21818,22308,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	171791789	171809924	chr3:171791789-171809924	1	-	171792349	171792808	789624	2	2157,749,	0,17386,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	171843348	171859318	chr3:171843348-171859318	3	+	171843383	171856704	789624	5	194,60,324,45,1258,	0,8633,10178,13314,14712,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	171843400	171938715	chr3:171843400-171938715	0	+	171843400	171856704	789624	7	142,60,324,45,130,92,71,	0,8581,10126,13262,72367,94637,95244,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	171876351	171900740	chr3:171876351-171900740	3	-	171876351	171876351	789624	3	45,92,290,	0,22822,24099,
#Deleted in new
chr3	171894435	171895240	chr3:171894435-171895240	3	+	171894435	171894435	8553170	2	88,382,	0,423,
#Partially deleted in new
chr3	171900510	171938062	chr3:171900510-171938062	0	+	171900510	171900510	8553170	4	237,130,41,25,	0,15257,26609,37527,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr3	172039627	172398771	chr3:172039627-172398771	1	+	172112479	172397475	789624	26	144,139,76,77,244,282,59,152,60,139,54,125,175,87,139,72,119,106,173,114,150,281,213,167,128,1608,	0,72824,93843,187243,207905,211632,246298,255735,259100,267735,271200,289324,290913,293461,295316,297702,301485,303383,304458,306699,307584,313175,323005,338642,341338,357536,
#Partially deleted in new
chr3	172039627	172187298	chr3:172039627-172187298	1	+	172112479	172186740	789624	4	144,139,76,587,	0,72824,93843,147084,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	172039658	172338324	chr3:172039658-172338324	0	+	172039658	172039658	8553170	16	113,139,76,77,244,282,59,152,60,139,54,125,175,87,139,995,	0,72793,93812,187212,207874,211601,246267,255704,259069,267704,271169,289293,290882,293430,295285,297671,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr3	172040553	172401665	chr3:172040553-172401665	3	+	172112479	172397475	789624	26	71,139,76,77,244,282,59,152,60,139,54,125,175,87,139,72,119,106,173,114,150,281,213,167,128,4502,	0,71898,92917,186317,206979,210706,245372,254809,258174,266809,270274,288398,289987,292535,294390,296776,300559,302457,303532,305773,306658,312249,322079,337716,340412,356610,
#Partially deleted in new
chr3	172040554	172186834	chr3:172040554-172186834	1	+	172112479	172186740	789624	4	70,139,76,123,	0,71897,92916,146157,
#Partially deleted in new
chr3	172046912	172397481	chr3:172046912-172397481	1	+	172112479	172397475	789624	26	35,139,76,77,244,282,59,152,60,139,54,125,175,87,139,72,119,106,173,114,150,281,213,167,128,318,	0,65539,86558,179958,200620,204347,239013,248450,251815,260450,263915,282039,283628,286176,288031,290417,294200,296098,297173,299414,300299,305890,315720,331357,334053,350251,
#Partially deleted in new
chr3	172126972	172227263	chr3:172126972-172227263	0	+	172126972	172126972	8553170	3	85,76,393,	0,6498,99898,
#Partially deleted in new
chr3	172126973	172251456	chr3:172126973-172251456	0	+	172127027	172251456	789624	5	84,76,77,244,197,	0,6497,99897,120559,124286,
#Partially deleted in new
chr3	172148534	172187218	chr3:172148534-172187218	0	+	172148534	172148534	8553170	3	36,139,507,	0,35710,38177,
#Deleted in new
chr3	172225427	172225872	chr3:172225427-172225872	7	-	172225427	172225427	16724991	1	445,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	172237325	172237591	chr3:172237325-172237591	3	+	172237325	172237325	8553170	1	266,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	172301653	172303052	chr3:172301653-172303052	3	-	172301653	172301653	8553170	1	1399,	0,
#Partially deleted in new
chr3	172306935	172310927	chr3:172306935-172310927	0	+	172306935	172306935	8553170	2	566,100,	0,3892,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	172329073	172335814	chr3:172329073-172335814	0	+	172329073	172329073	8553170	3	1642,87,871,	0,4015,5870,
#Partially deleted in new
chr3	172345894	172352878	chr3:172345894-172352878	0	+	172345894	172345894	8553170	3	546,150,76,	0,1317,6908,
#Deleted in new
chr3	172425849	172427089	chr3:172425849-172427089	7	-	172425849	172425849	16724991	1	1240,	0,
#Deleted in new
chr3	172445132	172448456	chr3:172445132-172448456	3	-	172445160	172448413	789624	2	333,839,	0,2485,
#Deleted in new
chr3	172447543	172448455	chr3:172447543-172448455	1	-	172447543	172448413	789624	1	912,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	172505507	172523507	chr3:172505507-172523507	3	-	172506491	172523384	0	5	1412,105,43,138,255,	0,3709,6109,9353,17745,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	172505661	172523475	chr3:172505661-172523475	1	-	172506883	172523384	0	3	1258,138,223,	0,9199,17591,
#Partially deleted in new
chr3	172507283	172523310	chr3:172507283-172523310	0	-	172509294	172523310	789624	4	166,105,138,58,	0,1933,7577,15969,
#Partially deleted in new
chr3	172509145	172523467	chr3:172509145-172523467	0	-	172509145	172509145	8553170	4	176,43,138,215,	0,2471,5715,14107,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	172511444	172523465	chr3:172511444-172523465	0	-	172511444	172511444	8553170	3	215,138,213,	0,3416,11808,
#Partially deleted in new
chr3	172517354	172523467	chr3:172517354-172523467	0	-	172517354	172517354	8553170	2	1111,215,	0,5898,
#Deleted in new
chr3	172522227	172522444	chr3:172522227-172522444	7	+	172522227	172522227	16724991	1	217,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	172560887	172595427	chr3:172560887-172595427	0	-	172560887	172560887	8553170	3	182,121,25,	0,33573,34515,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	172560900	172595607	chr3:172560900-172595607	3	-	172560900	172560900	789624	4	169,68,121,205,	0,13372,33560,34502,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	172590712	172594670	chr3:172590712-172594670	1	-	172590712	172590712	8553170	2	3002,210,	0,3748,
#Deleted in new
chr3	172603439	172604006	chr3:172603439-172604006	7	-	172603439	172603439	16724991	1	567,	0,
#Partially deleted in new
chr3	172630248	172711218	chr3:172630248-172711218	3	-	172633474	172711080	789624	5	3844,172,70,229,372,	0,5667,15374,17637,80598,
#Partially deleted in new
chr3	172630644	172711218	chr3:172630644-172711218	1	-	172633474	172711080	789624	5	3448,172,70,253,372,	0,5271,14978,17217,80202,
#Partially deleted in new
chr3	172630644	172711218	chr3:172630644-172711218	1	-	172633474	172645660	789624	4	3448,172,70,372,	0,5271,14978,80202,
#Partially deleted in new
chr3	172633774	172636184	chr3:172633774-172636184	0	-	172633774	172633774	8553170	2	318,269,	0,2141,
#Partially deleted in new
chr3	172633872	172711052	chr3:172633872-172711052	0	-	172633872	172711052	789624	5	220,172,70,253,206,	0,2043,11750,13989,76974,
#Partially deleted in new
chr3	172633998	172711112	chr3:172633998-172711112	0	-	172645644	172711080	789624	4	94,172,70,266,	0,1917,11624,76848,
#Deleted in new
chr3	172680713	172681224	chr3:172680713-172681224	7	+	172680713	172680713	16724991	1	511,	0,
#Deleted in new
chr3	172703123	172703225	chr3:172703123-172703225	3	+	172703123	172703123	8553170	1	102,	0,
#Partially deleted in new
chr3	172750681	172821474	chr3:172750681-172821474	3	+	172754530	172820237	0	24	176,152,80,183,90,108,74,131,116,63,223,137,120,69,111,97,82,79,120,139,155,108,147,1327,	0,3827,4613,6301,8298,9474,10928,11734,12009,12228,13596,18325,23221,31481,33117,34025,35811,51934,52179,55049,57088,64922,66009,69466,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr3	172750684	172821473	chr3:172750684-172821473	1	+	172754530	172820237	0	25	173,323,152,80,183,90,108,74,131,116,63,223,137,120,69,111,97,82,79,120,139,155,108,147,1326,	0,1465,3824,4610,6298,8295,9471,10925,11731,12006,12225,13593,18322,23218,31478,33114,34022,35808,51931,52176,55046,57085,64919,66006,69463,
#Partially deleted in new
chr3	172750703	172821474	chr3:172750703-172821474	1	+	172754530	172820237	0	25	154,152,80,93,183,90,108,74,131,116,63,223,137,120,69,111,97,82,79,120,139,155,108,147,1327,	0,3805,4591,4779,6279,8276,9452,10906,11712,11987,12206,13574,18303,23199,31459,33095,34003,35789,51912,52157,55027,57066,64900,65987,69444,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr3	172750725	172821474	chr3:172750725-172821474	1	+	172754530	172820237	0	25	132,323,152,77,183,90,108,74,131,116,63,223,137,120,69,111,97,82,79,120,139,155,108,147,1327,	0,1424,3783,4572,6257,8254,9430,10884,11690,11965,12184,13552,18281,23177,31437,33073,33981,35767,51890,52135,55005,57044,64878,65965,69422,
#Partially deleted in new
chr3	172750757	172761634	chr3:172750757-172761634	0	+	172754530	172761634	789624	7	100,152,77,183,90,108,25,	0,3751,4540,6225,8222,9398,10852,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	172750762	172757009	chr3:172750762-172757009	0	+	172754530	172757009	789624	6	95,287,152,80,93,27,	0,1387,3746,4532,4720,6220,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	172750958	172754585	chr3:172750958-172754585	0	+	172754530	172754585	789624	3	158,323,77,	0,1191,3550,
#Partially deleted in new
chr3	172750979	172759064	chr3:172750979-172759064	0	+	172754530	172759064	789624	5	137,152,80,183,85,	0,3529,4315,6003,8000,
#Partially deleted in new
chr3	172751016	172757130	chr3:172751016-172757130	0	+	172754530	172757130	789624	5	100,152,80,93,148,	0,3492,4278,4466,5966,
#Partially deleted in new
chr3	172754456	172820336	chr3:172754456-172820336	1	+	172754530	172820237	0	23	204,80,183,90,108,74,131,116,63,223,137,120,69,111,97,82,79,120,139,155,108,147,189,	0,838,2526,4523,5699,7153,7959,8234,8453,9821,14550,19446,27706,29342,30250,32036,48159,48404,51274,53313,61147,62234,65691,
#Partially deleted in new
chr3	172762786	172783880	chr3:172762786-172783880	0	+	172762786	172783880	789624	7	20,63,136,137,120,69,82,	0,123,1491,6220,11116,19376,21012,
#Deleted in new
chr3	172771276	172771405	chr3:172771276-172771405	3	-	172771276	172771276	8553170	1	129,	0,
#Deleted in new
chr3	172796428	172796558	chr3:172796428-172796558	3	-	172796428	172796428	8553170	1	130,	0,
#Partially deleted in new
chr3	172802690	172821473	chr3:172802690-172821473	0	+	172802690	172818769	789624	8	4,120,139,155,108,147,267,1326,	0,170,3040,5079,12913,14000,15857,17457,
#Partially deleted in new
chr3	172802860	172806107	chr3:172802860-172806107	0	+	172802860	172802860	8553170	2	120,377,	0,2870,
#Partially deleted in new
chr3	172807705	172820311	chr3:172807705-172820311	0	+	172807705	172807705	8553170	5	219,108,147,267,164,	0,7898,8985,10842,12442,
#Partially deleted in new
chr3	172818330	172820291	chr3:172818330-172820291	0	+	172818330	172818330	8553170	2	484,144,	0,1817,
#Deleted in new
chr3	172828735	172829176	chr3:172828735-172829176	7	-	172828735	172828735	16724991	1	441,	0,
#Deleted in new
chr3	172830980	172831229	chr3:172830980-172831229	7	-	172830980	172830980	16724991	1	249,	0,
#Partially deleted in new
chr3	172889357	173141268	chr3:172889357-173141268	3	-	172889569	173117731	789624	11	335,84,165,110,147,148,85,90,146,630,166,	0,24303,26959,34850,35988,67319,87610,130128,159591,227762,251745,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	173153736	173336965	chr3:173153736-173336965	3	+	173153736	173153736	8553170	5	22,119,75,47,207,	0,105958,106738,182811,183022,
#Partially deleted in new
chr3	173396283	173604637	chr3:173396283-173604637	0	+	173604598	173604637	789624	2	412,359,	0,207995,
#Partially deleted in new
chr3	173397779	173604629	chr3:173397779-173604629	0	+	173604598	173604629	789624	2	284,351,	0,206499,
#Deleted in new
chr3	173397781	173399871	chr3:173397781-173399871	0	+	173397781	173397781	8553170	2	282,288,	0,1802,
#Partially deleted in new
chr3	173398447	174286644	chr3:173398447-174286644	3	+	173604598	174281303	789624	7	40,69,813,153,213,790,6164,	0,36562,205831,409232,876867,880413,882033,
#Partially deleted in new
chr3	173584554	174283123	chr3:173584554-174283123	1	+	173604598	174281303	789624	6	480,813,153,213,790,2643,	0,19724,223125,690760,694306,695926,
#Partially deleted in new
chr3	173584919	174278982	chr3:173584919-174278982	0	+	173604598	174278982	789624	7	115,813,60,60,153,213,122,	0,19359,20614,215373,222760,690395,693941,
#Deleted in new
chr3	173644230	173644711	chr3:173644230-173644711	7	+	173644230	173644230	16724991	1	481,	0,
#Partially deleted in new
chr3	173910497	173920796	chr3:173910497-173920796	3	-	173910497	173910497	789624	4	372,72,100,271,	0,2048,4392,10028,
#Partially deleted in new
chr3	173910635	173920658	chr3:173910635-173920658	0	-	173910635	173910635	8553170	3	234,100,133,	0,4254,9890,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	174057640	174057864	chr3:174057640-174057864	3	+	174057640	174057640	8553170	1	224,	0,
#Partially deleted in new
chr3	174136434	174279362	chr3:174136434-174279362	0	+	174136434	174136434	8553170	3	146,213,502,	0,138880,142426,
#Partially deleted in new
chr3	174136447	174279092	chr3:174136447-174279092	0	+	174136447	174136447	8553170	3	133,186,232,	0,138867,142413,
#Partially deleted in new
chr3	174136461	174279055	chr3:174136461-174279055	0	+	174136461	174136461	8553170	4	119,61,186,195,	0,44326,138853,142399,
#Partially deleted in new
chr3	174136461	174275513	chr3:174136461-174275513	0	+	174136461	174136461	8553170	3	119,114,199,	0,66239,138853,
#Deleted in new
chr3	174275313	174281303	chr3:174275313-174281303	1	+	174275313	174281303	789624	3	214,790,823,	0,3547,5167,
#Deleted in new
chr3	174302943	174303287	chr3:174302943-174303287	7	-	174302943	174302943	16724991	1	344,	0,
#Deleted in new
chr3	174377243	174378005	chr3:174377243-174378005	7	+	174377243	174377243	16724991	1	762,	0,
#Partially deleted in new
chr3	174438572	174536683	chr3:174438572-174536683	0	+	174438572	174438572	8553170	2	113,63,	0,98048,
#Partially deleted in new
chr3	174440944	174540748	chr3:174440944-174540748	0	+	174440944	174440944	8553170	6	88,83,72,136,63,21,	0,17569,18296,82468,95676,99783,
#Partially deleted in new
chr3	174440977	174459777	chr3:174440977-174459777	0	+	174440977	174440977	8553170	3	55,83,537,	0,17536,18263,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	174440982	174551359	chr3:174440982-174551359	0	+	174440982	174440982	8553170	3	50,63,791,	0,95638,109586,
#Partially deleted in new
chr3	174440986	175097142	chr3:174440986-175097142	0	+	175096797	175097142	789624	4	46,69,106,353,	0,109582,296654,655803,
#Partially deleted in new
chr3	174440986	174737746	chr3:174440986-174737746	0	+	174440986	174440986	8553170	4	46,63,69,106,	0,95634,109582,296654,
#Partially deleted in new
chr3	174631822	174632064	chr3:174631822-174632064	3	+	174631822	174631822	8553170	1	242,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	174859279	175810552	chr3:174859279-175810552	3	+	174859407	175803203	789624	14	171,502,274,120,151,144,93,206,120,147,96,94,199,7548,	0,237510,374651,397131,464895,587949,604121,607699,612359,716761,768011,878026,895940,943725,
#Partially deleted in new
chr3	174859321	175257213	chr3:174859321-175257213	0	+	174859321	174859321	8553170	4	129,502,274,803,	0,237468,374609,397089,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	174863815	175581221	chr3:174863815-175581221	0	+	174863815	174863815	8553170	11	275,502,274,120,151,144,93,206,120,147,70,	0,232974,370115,392595,460359,583413,599585,603163,607823,712225,717336,
#Deleted in new
chr3	175059360	175060031	chr3:175059360-175060031	7	-	175059360	175059360	16724991	1	671,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	175079306	175115242	chr3:175079306-175115242	3	-	175079306	175079306	789624	4	165,138,48,62,	0,1758,33237,35874,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	175079311	175112600	chr3:175079311-175112600	0	-	175079311	175079311	8553170	3	160,138,57,	0,1753,33232,
#Partially deleted in new
chr3	175124405	175655563	chr3:175124405-175655563	0	+	175124405	175124405	8553170	11	236,48,274,120,151,93,206,120,147,96,83,	0,93670,109525,132005,199769,338995,342573,347233,451635,502885,531075,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	175234860	175271096	chr3:175234860-175271096	3	-	175234860	175234860	789624	3	949,49,40,	0,7521,36196,
#Partially deleted in new
chr3	175256410	175487649	chr3:175256410-175487649	0	+	175256410	175447273	789624	7	120,144,131,93,206,120,122,	0,190818,203634,206990,210568,215228,231117,
#Deleted in new
chr3	175369539	175369621	chr3:175369539-175369621	3	+	175369539	175369539	5263520	1	82,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	175397246	175397348	chr3:175397246-175397348	3	-	175397246	175397246	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	175609478	175609613	chr3:175609478-175609613	3	+	175609478	175609478	8553170	1	135,	0,
#Deleted in new
chr3	175675086	175676801	chr3:175675086-175676801	7	-	175675086	175675086	16724991	1	1715,	0,
#Deleted in new
chr3	175718230	175718670	chr3:175718230-175718670	7	-	175718230	175718230	16724991	1	440,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	175767557	175767661	chr3:175767557-175767661	3	+	175767557	175767557	8553170	1	104,	0,
#Partially deleted in new
chr3	175773144	175776333	chr3:175773144-175776333	3	-	175773144	175773144	789624	3	520,216,68,	0,1798,3121,
#Deleted in new
chr3	175938928	175941037	chr3:175938928-175941037	3	-	175938928	175938928	8553170	1	2109,	0,
#Deleted in new
chr3	175977496	175978570	chr3:175977496-175978570	7	-	175977496	175977496	16724991	1	1074,	0,
#Deleted in new
chr3	176068041	176068908	chr3:176068041-176068908	7	-	176068041	176068041	16724991	1	867,	0,
#Deleted in new
chr3	176069106	176069252	chr3:176069106-176069252	7	+	176069106	176069106	16724991	1	146,	0,
#Deleted in new
chr3	176113701	176114537	chr3:176113701-176114537	7	-	176113701	176113701	16724991	1	836,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	176515102	176515151	chr3:176515102-176515151	3	+	176515102	176515102	5263520	1	49,	0,
#Partially deleted in new
chr3	176604142	176635532	chr3:176604142-176635532	3	-	176604142	176604142	789624	3	544,191,92,	0,30202,31298,
#Partially deleted in new
chr3	176626278	176634457	chr3:176626278-176634457	0	-	176626278	176626278	8553170	3	68,145,113,	0,3656,8066,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	176643940	176867838	chr3:176643940-176867838	3	-	176643940	176643940	8553170	5	183,115,182,60,138,	0,11614,12609,209768,223760,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	176763232	176763341	chr3:176763232-176763341	7	+	176763232	176763232	16724991	1	109,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	176814154	176817001	chr3:176814154-176817001	3	-	176814154	176814154	789624	2	1572,828,	0,2019,
#Deleted in new
chr3	177010718	177011067	chr3:177010718-177011067	7	-	177010718	177010718	16724991	1	349,	0,
#Partially deleted in new
chr3	177019339	177041181	chr3:177019339-177041181	0	-	177019339	177019339	8553170	7	6185,102,166,128,75,122,110,	0,7033,13631,14858,18758,18973,21732,
#Partially deleted in new
chr3	177019354	177196478	chr3:177019354-177196478	3	-	177025497	177064977	0	16	6170,102,166,128,75,122,61,98,64,142,133,223,146,103,76,139,	0,7018,13616,14843,18743,18958,26774,27945,28131,30642,31123,32149,34418,45565,79111,176985,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	177020753	177027830	chr3:177020753-177027830	0	-	177020753	177020753	8553170	2	4771,1458,	0,5619,
#Partially deleted in new
chr3	177022925	177098493	chr3:177022925-177098493	0	-	177026461	177064977	789624	15	2599,98,166,128,75,122,61,98,64,142,133,223,146,103,28,	0,3447,10045,11272,15172,15387,23203,24374,24560,27071,27552,28578,30847,41994,75540,
#Partially deleted in new
chr3	177023338	177197396	chr3:177023338-177197396	1	-	177025497	177064977	0	16	2186,102,166,128,75,122,61,98,64,142,133,223,146,103,76,276,	0,3034,9632,10859,14759,14974,22790,23961,24147,26658,27139,28165,30434,41581,75127,173782,
#Partially deleted in new
chr3	177025344	177034230	chr3:177025344-177034230	0	-	177025497	177034230	789624	4	180,102,40,33,	0,1028,7626,8853,
#Deleted in new
chr3	177025984	177026415	chr3:177025984-177026415	0	-	177025984	177025984	8553170	2	57,43,	0,388,
#Partially deleted in new
chr3	177026420	177032597	chr3:177026420-177032597	0	-	177026420	177026420	8553170	2	54,46,	0,6131,
#Deleted in new
chr3	177032317	177033047	chr3:177032317-177033047	0	-	177032317	177032317	8553170	2	23,77,	0,653,
#Deleted in new
chr3	177032605	177034203	chr3:177032605-177034203	0	-	177032605	177032605	8553170	3	54,40,6,	0,365,1592,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	177037404	177047892	chr3:177037404-177047892	0	+	177037404	177037404	8553170	4	340,89,100,259,	0,957,7492,10229,
#Partially deleted in new
chr3	177044860	177047923	chr3:177044860-177047923	3	+	177044860	177044860	8553170	2	124,290,	0,2773,
#Partially deleted in new
chr3	177050549	177196484	chr3:177050549-177196484	0	-	177050549	177051669	789624	4	61,223,146,145,	0,954,3223,145790,
#Partially deleted in new
chr3	177050557	177196433	chr3:177050557-177196433	0	-	177050557	177051669	789624	5	53,223,146,76,94,	0,946,3215,47908,145782,
#Partially deleted in new
chr3	177050601	177196423	chr3:177050601-177196423	0	-	177050601	177064977	789624	5	9,223,146,103,84,	0,902,3171,14318,145738,
#Partially deleted in new
chr3	177050603	177197252	chr3:177050603-177197252	0	-	177050603	177064977	789624	5	7,223,146,103,132,	0,900,3169,14316,146517,
#Partially deleted in new
chr3	177051503	177197225	chr3:177051503-177197225	0	-	177051503	177051669	789624	4	223,146,76,105,	0,2269,46962,145617,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	177051535	177228000	chr3:177051535-177228000	0	-	177051535	177064977	789624	6	191,146,103,119,76,133,	0,2237,13384,28291,46930,176332,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	177051554	177196482	chr3:177051554-177196482	0	-	177051554	177079875	789624	5	172,146,119,76,143,	0,2218,28272,46911,144785,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	177051570	177197184	chr3:177051570-177197184	0	-	177051570	177064977	789624	5	156,146,103,119,64,	0,2202,13349,28256,145550,
#Partially deleted in new
chr3	177051593	177197227	chr3:177051593-177197227	0	-	177051593	177064977	789624	5	133,146,103,79,107,	0,2179,13326,59215,145527,
#Partially deleted in new
chr3	177051614	177197163	chr3:177051614-177197163	0	-	177051614	177064977	789624	6	112,146,103,76,87,43,	0,2158,13305,46851,79748,145506,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	177051686	177196435	chr3:177051686-177196435	0	-	177051686	177064977	789624	6	40,146,103,119,76,96,	0,2086,13233,28140,46779,144653,
#Partially deleted in new
chr3	177051700	177197227	chr3:177051700-177197227	0	-	177051700	177051700	8553170	4	26,103,76,107,	0,13219,46765,145420,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	177051713	177197227	chr3:177051713-177197227	0	-	177051713	177064977	789624	6	13,146,103,119,76,107,	0,2059,13206,28113,46752,145407,
#Partially deleted in new
chr3	177053791	177197251	chr3:177053791-177197251	0	-	177053791	177064977	789624	6	127,103,30,76,87,131,	0,11128,37359,44674,77571,143329,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	177053877	177197226	chr3:177053877-177197226	0	-	177053877	177064977	789624	6	41,103,147,119,76,106,	0,11042,24754,25949,44588,143243,
#Partially deleted in new
chr3	177064978	177194126	chr3:177064978-177194126	0	-	177064978	177064978	8553170	2	44,63,	0,129085,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	177079453	177196353	chr3:177079453-177196353	0	-	177079453	177079453	8553170	3	492,76,14,	0,19012,116886,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	177079886	177201817	chr3:177079886-177201817	0	-	177079886	177079886	8553170	3	59,76,79,	0,18579,121852,
#Partially deleted in new
chr3	177098470	177136245	chr3:177098470-177136245	0	-	177098470	177098470	8553170	2	71,29,	0,37746,
#Partially deleted in new
chr3	177098486	177099447	chr3:177098486-177099447	0	-	177098486	177098486	8553170	2	55,43,	0,918,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	177120690	177120800	chr3:177120690-177120800	3	-	177120690	177120690	8553170	1	110,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	177126016	177126120	chr3:177126016-177126120	3	-	177126016	177126016	8553170	1	104,	0,
#Partially deleted in new
chr3	177131376	177197194	chr3:177131376-177197194	0	-	177131376	177131376	8553170	3	73,24,74,	0,32601,65744,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	177131377	177171417	chr3:177131377-177171417	0	-	177131377	177131377	8553170	2	72,28,	0,40012,
#Deleted in new
chr3	177195587	177196400	chr3:177195587-177196400	0	-	177195587	177195587	8553170	2	77,61,	0,752,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	177294441	177323418	chr3:177294441-177323418	3	+	177294441	177294441	789624	2	56,1990,	0,26987,
#Deleted in new
chr3	177297160	177298386	chr3:177297160-177298386	7	-	177297160	177297160	16724991	1	1226,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	177441920	177752094	chr3:177441920-177752094	1	+	177441920	177441920	789624	4	190,99,139,184,	0,97474,187496,309990,
#Partially deleted in new
chr3	177441963	177752305	chr3:177441963-177752305	3	+	177441963	177441963	8553170	2	147,395,	0,309947,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	177503302	177503552	chr3:177503302-177503552	3	-	177503302	177503302	8553170	1	250,	0,
#Partially deleted in new
chr3	177617589	177752094	chr3:177617589-177752094	0	+	177617589	177617589	8553170	3	114,139,184,	0,11827,134321,
#Deleted in new
chr3	177624281	177624409	chr3:177624281-177624409	3	-	177624281	177624281	8553170	1	128,	0,
#Partially deleted in new
chr3	177676709	177752132	chr3:177676709-177752132	1	+	177676709	177676709	8553170	2	297,222,	0,75201,
#Deleted in new
chr3	177683626	177691250	chr3:177683626-177691250	3	+	177683626	177683626	8553170	4	207,71,187,122,	0,1317,3775,7502,
#Deleted in new
chr3	177700345	177701072	chr3:177700345-177701072	7	-	177700345	177700345	16724991	1	727,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	177816864	177899224	chr3:177816864-177899224	3	+	177816864	177816864	789624	3	132,164,2661,	0,78748,79699,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	177827782	177896932	chr3:177827782-177896932	0	+	177827782	177827782	8553170	3	48,164,369,	0,67830,68781,
#Partially deleted in new
chr3	177934822	177937662	chr3:177934822-177937662	3	+	177934822	177934822	8553170	3	141,295,124,	0,367,2716,
#Partially deleted in new
chr3	177954065	177959798	chr3:177954065-177959798	3	-	177954065	177954065	8553170	2	139,54,	0,5679,
#Deleted in new
chr3	178007671	178007779	chr3:178007671-178007779	3	-	178007671	178007671	8553170	1	108,	0,
#Partially deleted in new
chr3	178202049	178385309	chr3:178202049-178385309	3	-	178202049	178202049	8553170	3	195,275,103,	0,4529,183157,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	178206678	178385417	chr3:178206678-178385417	1	-	178206678	178206678	8553170	4	175,124,69,211,	0,71255,165072,178528,
#Partially deleted in new
chr3	178272931	178828362	chr3:178272931-178828362	0	+	178807409	178828362	789624	4	75,123,171,185,	0,534411,552656,555246,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	178333538	178385396	chr3:178333538-178385396	1	-	178333538	178333538	8553170	2	1910,190,	0,51668,
#Partially deleted in new
chr3	178335021	178385376	chr3:178335021-178385376	0	-	178335021	178335021	8553170	3	401,69,170,	0,36729,50185,
#Partially deleted in new
chr3	178335024	178385357	chr3:178335024-178385357	0	-	178335024	178335024	8553170	2	398,151,	0,50182,
#Partially deleted in new
chr3	178419122	178843300	chr3:178419122-178843300	3	+	178807409	178842937	8553170	5	253,123,171,196,648,	0,388220,406465,409055,423530,
#Partially deleted in new
chr3	178419200	178457305	chr3:178419200-178457305	3	+	178419200	178419200	5263520	3	175,161,212,	0,37413,37893,
#Partially deleted in new
chr3	178419233	178457309	chr3:178419233-178457309	0	+	178419233	178419233	8553170	3	142,161,242,	0,37380,37834,
#Partially deleted in new
chr3	178419257	178457303	chr3:178419257-178457303	0	+	178419257	178419257	8553170	2	118,210,	0,37836,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	178429196	178429290	chr3:178429196-178429290	7	-	178429196	178429196	16724991	1	94,	0,
#Deleted in new
chr3	178493326	178493810	chr3:178493326-178493810	7	-	178493326	178493326	16724991	1	484,	0,
#Partially deleted in new
chr3	178536204	178843141	chr3:178536204-178843141	3	+	178807409	178842937	0	6	507,77,123,171,196,489,	0,258937,271138,289383,291973,306448,
#Partially deleted in new
chr3	178536235	178843141	chr3:178536235-178843141	1	+	178807409	178842937	0	5	476,123,171,196,489,	0,271107,289352,291942,306417,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	178536235	178824680	chr3:178536235-178824680	0	+	178536235	178536235	8553170	3	476,123,123,	0,271107,288322,
#Partially deleted in new
chr3	178558699	178844429	chr3:178558699-178844429	1	+	178807409	178842937	0	5	285,123,171,196,1777,	0,248643,266888,269478,283953,
#Partially deleted in new
chr3	178558829	178828250	chr3:178558829-178828250	0	+	178807409	178828250	789624	5	155,77,123,171,73,	0,236312,248513,266758,269348,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	178558884	178828266	chr3:178558884-178828266	0	+	178807409	178824582	789624	5	100,123,125,171,89,	0,248458,265673,266703,269293,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	178729283	178859550	chr3:178729283-178859550	0	-	178729283	178729283	8553170	5	109,82,191,72,62,	0,19120,19762,112261,130205,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	178746938	178860349	chr3:178746938-178860349	1	-	178746938	178746938	8553170	8	173,82,127,57,142,72,135,56,	0,1465,2171,10141,54854,94606,112550,113355,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	178748987	178801936	chr3:178748987-178801936	0	-	178748987	178748987	8553170	2	249,144,	0,52805,
#Partially deleted in new
chr3	178807337	178844428	chr3:178807337-178844428	1	+	178807409	178842937	0	4	128,171,196,1776,	0,18250,20840,35315,
#Partially deleted in new
chr3	178807337	178844428	chr3:178807337-178844428	1	+	178807409	178842937	789624	5	128,37,77,196,1776,	0,18250,18344,20840,35315,
#Partially deleted in new
chr3	178807338	178820711	chr3:178807338-178820711	0	+	178807338	178807338	8553170	2	127,201,	0,13172,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	179017222	179072279	chr3:179017222-179072279	3	-	179025016	179067752	789624	6	8006,101,167,120,327,685,	0,10200,10423,13657,50260,54372,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	179023738	179072215	chr3:179023738-179072215	1	-	179025016	179067752	789624	7	1487,101,167,120,327,121,621,	0,3684,3907,7141,43744,47588,47856,
#Partially deleted in new
chr3	179027756	179071566	chr3:179027756-179071566	0	-	179027756	179067752	789624	4	56,120,327,240,	0,3123,39726,43570,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	179097730	179097840	chr3:179097730-179097840	3	+	179097730	179097730	8553170	1	110,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	179101365	179147973	chr3:179101365-179147973	3	-	179101365	179101365	789624	3	190,103,58,	0,31403,46550,
#Partially deleted in new
chr3	179148113	179198888	chr3:179148113-179198888	0	+	179198825	179198888	789624	2	106,139,	0,50636,
#Partially deleted in new
chr3	179148522	179240093	chr3:179148522-179240093	3	+	179198825	179234364	0	21	81,428,210,251,246,86,106,153,135,125,82,165,104,172,107,122,79,171,118,152,6000,	0,50227,51167,52767,55021,55980,61072,61663,61908,69687,70673,71048,71426,72463,75558,76177,77439,80749,81481,81702,85571,
#Partially deleted in new
chr3	179148573	179235098	chr3:179148573-179235098	1	+	179198825	179233355	789624	22	30,428,210,251,246,86,106,153,135,125,82,165,104,172,107,122,79,171,118,152,83,1005,	0,50176,51116,52716,54970,55929,61021,61612,61857,69636,70622,70997,71375,72412,75507,76126,77388,80698,81430,81651,84715,85520,
#Partially deleted in new
chr3	179149526	179199179	chr3:179149526-179199179	0	+	179198825	179199179	789624	2	190,430,	0,49223,
#Deleted in new
chr3	179169082	179169210	chr3:179169082-179169210	3	-	179169082	179169082	8553170	1	128,	0,
#Partially deleted in new
chr3	179219550	179226017	chr3:179219550-179226017	0	+	179219550	179219550	8553170	6	185,104,172,107,122,56,	0,398,1435,4530,5149,6411,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	179236690	179259208	chr3:179236690-179259208	1	-	179242903	179258949	789624	4	6594,199,192,261,	0,7804,14052,22257,
#Partially deleted in new
chr3	179239741	179243284	chr3:179239741-179243284	0	-	179240021	179243284	789624	2	323,152,	0,3391,
#Partially deleted in new
chr3	179239805	179267002	chr3:179239805-179267002	1	-	179239995	179266710	789624	4	259,199,192,354,	0,4689,10937,26843,
#Partially deleted in new
chr3	179239820	179259891	chr3:179239820-179259891	0	-	179242903	179258949	789624	5	244,476,199,192,944,	0,2988,4674,10922,19127,
#Partially deleted in new
chr3	179242763	179251630	chr3:179242763-179251630	3	-	179242903	179250990	789624	3	521,199,888,	0,1731,7979,
#Partially deleted in new
chr3	179242770	179251615	chr3:179242770-179251615	1	-	179242903	179251103	789624	4	514,199,192,580,	0,1724,7972,8265,
#Partially deleted in new
chr3	179242770	179266971	chr3:179242770-179266971	1	-	179242903	179266710	789624	4	514,199,192,323,	0,1724,7972,23878,
#Deleted in new
chr3	179259027	179261273	chr3:179259027-179261273	7	-	179259027	179259027	16724991	1	2246,	0,
#Partially deleted in new
chr3	179322990	179334614	chr3:179322990-179334614	1	+	179328293	179334422	789624	6	301,71,69,111,135,1346,	0,4570,5292,6627,9998,10278,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	179323075	179333613	chr3:179323075-179333613	0	+	179328293	179333613	789624	7	216,281,71,69,111,135,345,	0,1966,4485,5207,6542,9913,10193,
#Partially deleted in new
chr3	179323245	179333376	chr3:179323245-179333376	0	+	179328293	179333376	789624	7	46,44,71,69,111,135,108,	0,1704,4315,5037,6372,9743,10023,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	179323762	179338583	chr3:179323762-179338583	3	+	179328293	179334422	789624	7	82,281,71,69,111,135,5315,	0,1279,3798,4520,5855,9226,9506,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	179325152	179333829	chr3:179325152-179333829	0	+	179328293	179333829	789624	6	170,71,69,111,135,561,	0,2408,3130,4465,7836,8116,
#Partially deleted in new
chr3	179327560	179334612	chr3:179327560-179334612	1	+	179328293	179334422	789624	5	71,69,111,135,1344,	0,722,2057,5428,5708,
#Partially deleted in new
chr3	179327743	179333354	chr3:179327743-179333354	0	+	179328293	179333354	789624	5	163,69,111,135,86,	0,539,1874,5245,5525,
#Partially deleted in new
chr3	179328117	179333123	chr3:179328117-179333123	0	+	179328117	179328117	8553170	3	234,111,135,	0,1500,4871,
#Partially deleted in new
chr3	179328293	179334422	chr3:179328293-179334422	1	+	179328293	179334422	789624	4	58,111,135,1154,	0,1324,4695,4975,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	179340321	179341887	chr3:179340321-179341887	3	+	179340321	179340321	8553170	1	1566,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr3	179347691	179394931	chr3:179347691-179394931	3	+	179348851	179392059	0	18	119,119,136,163,125,109,108,154,68,122,127,105,103,230,153,197,135,2951,	0,1153,4208,11148,14666,16605,17426,19747,20344,27528,29350,29652,30649,30893,37877,38741,42312,44289,
#Partially deleted in new
chr3	179347734	179393025	chr3:179347734-179393025	0	+	179348851	179377359	0	17	76,119,136,163,125,109,108,154,68,122,105,103,230,153,197,135,1045,	0,1110,4165,11105,14623,16562,17383,19704,20301,27485,29609,30606,30850,37834,38698,42269,44246,
#Partially deleted in new
chr3	179348049	179362410	chr3:179348049-179362410	0	+	179348851	179362410	789624	5	72,119,136,163,53,	0,795,3850,10790,14308,
#Partially deleted in new
chr3	179348760	179392496	chr3:179348760-179392496	1	+	179348851	179392059	0	17	203,136,163,125,109,108,154,68,122,127,105,103,230,153,197,135,516,	0,3139,10079,13597,15536,16357,18678,19275,26459,28281,28583,29580,29824,36808,37672,41243,43220,
#Partially deleted in new
chr3	179359719	179367498	chr3:179359719-179367498	0	+	179362387	179367498	789624	5	141,125,109,108,60,	0,2638,4577,5398,7719,
#Partially deleted in new
chr3	179362357	179392496	chr3:179362357-179392496	0	+	179362357	179392059	789624	12	125,109,108,154,68,122,127,105,153,197,135,516,	0,1939,2760,5081,5678,12862,14684,14986,23211,24075,27646,29623,
#Deleted in new
chr3	179376921	179377432	chr3:179376921-179377432	0	+	179376921	179376921	8553170	2	247,89,	0,422,
#Partially deleted in new
chr3	179377061	179378790	chr3:179377061-179378790	0	+	179377061	179377061	8553170	3	387,103,206,	0,1279,1523,
#Partially deleted in new
chr3	179377129	179386498	chr3:179377129-179386498	0	+	179377129	179377129	8553170	5	39,105,474,153,66,	0,214,1211,8439,9303,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	179396088	179451590	chr3:179396088-179451590	3	-	179401212	179426200	789624	10	5231,217,202,67,163,64,107,39,99,245,	0,9101,17323,17626,18796,20404,23310,24800,30055,55257,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	179396960	179399191	chr3:179396960-179399191	3	+	179396960	179396960	8553170	2	962,735,	0,1496,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	179397332	179398315	chr3:179397332-179398315	0	+	179397332	179397332	8553170	2	661,32,	0,951,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	179397707	179398683	chr3:179397707-179398683	0	+	179397707	179397707	8553170	2	234,400,	0,576,
#Partially deleted in new
chr3	179400848	179416526	chr3:179400848-179416526	0	-	179401289	179416526	789624	5	471,202,67,163,34,	0,12563,12866,14036,15644,
#Partially deleted in new
chr3	179401086	179451145	chr3:179401086-179451145	1	-	179401212	179426200	789624	10	233,217,202,67,163,64,107,39,99,169,	0,4103,12325,12628,13798,15406,18312,19802,25057,49890,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	179405447	179405944	chr3:179405447-179405944	3	+	179405447	179405447	8553170	1	497,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	179410324	179413730	chr3:179410324-179413730	0	-	179410324	179410324	8553170	3	273,202,16,	0,3087,3390,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	179416520	179451476	chr3:179416520-179451476	0	-	179416520	179426200	789624	6	36,107,39,99,159,131,	0,2878,4368,9623,21220,34825,
#Deleted in new
chr3	179452394	179452419	chr3:179452394-179452419	7	-	179452394	179452394	16724991	1	25,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	179464345	179465328	chr3:179464345-179465328	7	+	179464345	179464345	16724991	1	983,	0,
#Partially deleted in new
chr3	179562879	179588408	chr3:179562879-179588408	3	+	179563092	179588010	789624	14	238,77,175,101,98,95,107,90,62,115,81,96,87,479,	0,6944,7187,10489,11490,13337,13740,13944,17760,18014,18260,20473,23666,25050,
#Partially deleted in new
chr3	179562885	179588407	chr3:179562885-179588407	1	+	179570090	179588010	789624	14	88,77,175,101,98,95,107,90,62,115,81,96,87,478,	0,6938,7181,10483,11484,13331,13734,13938,17754,18008,18254,20467,23660,25044,
#Partially deleted in new
chr3	179562919	179588398	chr3:179562919-179588398	1	+	179570090	179588010	789624	14	246,77,175,101,98,95,107,90,62,115,81,96,87,469,	0,6904,7147,10449,11450,13297,13700,13904,17720,17974,18220,20433,23626,25010,
#Partially deleted in new
chr3	179562922	179575488	chr3:179562922-179575488	0	+	179562922	179562922	8553170	6	51,77,175,101,132,86,	0,6901,7144,10446,11447,12480,
#Partially deleted in new
chr3	179562922	179570391	chr3:179562922-179570391	0	+	179562922	179562922	8553170	3	195,77,325,	0,6901,7144,
#Partially deleted in new
chr3	179562929	179574563	chr3:179562929-179574563	0	+	179562929	179562929	8553170	5	44,77,175,101,194,	0,6894,7137,10439,11440,
#Partially deleted in new
chr3	179562958	179570241	chr3:179562958-179570241	0	+	179570090	179570241	789624	3	207,77,175,	0,6865,7108,
#Partially deleted in new
chr3	179569814	179580701	chr3:179569814-179580701	0	+	179569814	179575427	789624	9	86,175,101,98,102,95,107,90,62,	0,252,3554,4555,5588,6402,6805,7009,10825,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	179573233	179575210	chr3:179573233-179575210	0	+	179573233	179573233	8553170	2	236,841,	0,1136,
#Partially deleted in new
chr3	179574352	179576275	chr3:179574352-179576275	0	+	179574352	179574352	8553170	2	115,59,	0,1864,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	179575009	179581008	chr3:179575009-179581008	0	+	179575009	179575009	8553170	6	495,95,107,90,62,115,	0,1207,1610,1814,5630,5884,
#Partially deleted in new
chr3	179576375	179580955	chr3:179576375-179580955	0	+	179576375	179576375	8553170	4	351,90,62,62,	0,448,4264,4518,
#Partially deleted in new
chr3	179581163	179586708	chr3:179581163-179586708	0	+	179581163	179581163	8553170	3	57,96,163,	0,2189,5382,
#Deleted in new
chr3	179583261	179583762	chr3:179583261-179583762	3	-	179583261	179583261	8553170	1	501,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	179584270	179584410	chr3:179584270-179584410	3	-	179584270	179584270	8553170	1	140,	0,
#Partially deleted in new
chr3	179586487	179588241	chr3:179586487-179588241	0	+	179586487	179586487	8553170	2	145,312,	0,1442,
#Partially deleted in new
chr3	179588284	179604654	chr3:179588284-179604654	3	-	179588871	179604624	0	7	711,96,131,97,61,146,128,	0,4359,5480,10390,13445,14367,16242,
#Partially deleted in new
chr3	179588454	179604640	chr3:179588454-179604640	1	-	179588871	179604624	0	7	541,96,131,97,61,86,114,	0,4189,5310,10220,13275,14197,16072,
#Partially deleted in new
chr3	179588830	179604649	chr3:179588830-179604649	1	-	179588871	179598746	0	6	165,96,131,97,61,123,	0,3813,4934,9844,12899,15696,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	179604689	179617418	chr3:179604689-179617418	0	+	179604689	179604689	8553170	4	250,89,67,436,	0,10281,11293,12293,
#Partially deleted in new
chr3	179604701	179624497	chr3:179604701-179624497	3	+	179604815	179624040	0	6	238,89,67,62,107,578,	0,10269,11281,12281,13713,19218,
#Partially deleted in new
chr3	179604786	179624499	chr3:179604786-179624499	1	+	179604815	179623985	789624	5	153,89,67,62,580,	0,10184,11196,12196,19133,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	179604790	179627647	chr3:179604790-179627647	1	+	179604815	179624040	0	4	149,62,107,3728,	0,12192,13624,19129,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	179604800	179624235	chr3:179604800-179624235	1	+	179604815	179624040	789624	6	139,55,65,62,107,316,	0,2957,11184,12182,13614,19119,
#Partially deleted in new
chr3	179604808	179624376	chr3:179604808-179624376	0	+	179604815	179616992	789624	5	131,67,62,107,457,	0,11174,12174,13606,19111,
#Partially deleted in new
chr3	179604810	179624500	chr3:179604810-179624500	0	+	179604815	179614956	789624	6	129,108,67,62,107,581,	0,10141,11172,12172,13604,19109,
#Partially deleted in new
chr3	179604815	179615408	chr3:179604815-179615408	0	+	179604815	179604815	8553170	2	124,438,	0,10155,
#Partially deleted in new
chr3	179604825	179624091	chr3:179604825-179624091	0	+	179604825	179624040	789624	7	114,89,60,67,62,107,172,	0,10145,10730,11157,12157,13589,19094,
#Partially deleted in new
chr3	179604840	179624267	chr3:179604840-179624267	0	+	179604840	179618443	789624	5	99,108,67,107,348,	0,10111,11142,13574,19079,
#Partially deleted in new
chr3	179604889	179618477	chr3:179604889-179618477	0	+	179604889	179604889	8553170	3	50,62,63,	0,12093,13525,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	179604906	179624351	chr3:179604906-179624351	0	+	179604906	179604906	8553170	5	33,55,62,107,432,	0,2851,12076,13508,19013,
#Partially deleted in new
chr3	179615205	179618522	chr3:179615205-179618522	0	+	179615205	179615205	8553170	3	844,62,108,	0,1777,3209,
#Partially deleted in new
chr3	179616006	179624498	chr3:179616006-179624498	0	+	179616006	179623985	789624	3	43,62,579,	0,976,7913,
#Partially deleted in new
chr3	179616974	179624377	chr3:179616974-179624377	0	+	179616974	179616974	8553170	3	70,107,458,	0,1440,6945,
#Partially deleted in new
chr3	179618226	179624100	chr3:179618226-179624100	0	+	179618226	179618226	8553170	2	295,181,	0,5693,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	179649493	179650200	chr3:179649493-179650200	7	-	179649493	179649493	16724991	1	707,	0,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr3	179652754	179789401	chr3:179652754-179789401	3	+	179653225	179784141	0	21	639,126,61,122,143,185,95,188,72,94,126,154,175,89,123,27,144,167,154,85,5354,	0,29123,37486,48253,54179,56018,67185,68647,77434,77861,87492,89442,92288,99530,101977,104297,108357,111247,112940,128984,131293,
#Partially deleted in new
chr3	179653049	179757137	chr3:179653049-179757137	0	+	179653049	179653049	8553170	15	344,126,61,122,143,185,95,188,72,94,126,154,68,102,86,	0,28828,37191,47958,53884,55723,66890,68352,77139,77566,87197,89147,91993,101703,104002,
#Partially deleted in new
chr3	179653297	179708794	chr3:179653297-179708794	0	+	179653297	179701013	789624	5	96,126,122,143,22,	0,28580,47710,53636,55475,
#Partially deleted in new
chr3	179653692	179784406	chr3:179653692-179784406	1	+	179681904	179784141	0	21	58,126,61,122,143,185,95,188,72,94,126,154,175,89,123,27,144,167,154,85,359,	0,28185,36548,47315,53241,55080,66247,67709,76496,76923,86554,88504,91350,98592,101039,103359,107419,110309,112002,128046,130355,
#Partially deleted in new
chr3	179721563	179761151	chr3:179721563-179761151	0	+	179721563	179761151	789624	9	26,72,94,126,154,175,89,123,40,	0,8625,9052,18683,20633,23479,30721,33168,39548,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	179794957	179898323	chr3:179794957-179898323	1	-	179801827	179898210	789624	12	7075,158,166,198,71,144,117,96,97,124,112,182,	0,12716,13314,14513,16843,20903,24902,64104,79369,80396,92715,103184,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	179794957	180036930	chr3:179794957-180036930	3	-	179801827	180036599	789624	15	7075,158,166,198,71,144,117,96,97,124,195,112,105,72,352,	0,12716,13314,14513,16843,20903,24902,64104,79369,80396,84971,92715,103184,176636,241621,
#Partially deleted in new
chr3	179801055	180036770	chr3:179801055-180036770	1	-	179801827	180036599	789624	15	977,158,166,198,71,144,117,96,97,124,195,112,105,66,192,	0,6618,7216,8415,10745,14805,18804,58006,73271,74298,78873,86617,97086,99614,235523,
#Partially deleted in new
chr3	179801065	180037053	chr3:179801065-180037053	1	-	179801827	180036599	789624	14	967,158,166,198,71,144,117,96,97,124,195,112,72,475,	0,6608,7206,8405,10735,14795,18794,57996,73261,74288,78863,86607,170528,235513,
#Partially deleted in new
chr3	179801517	179974259	chr3:179801517-179974259	1	-	179801827	179875406	789624	14	515,158,166,198,71,144,117,96,97,124,195,112,72,244,	0,6156,6754,7953,10283,14343,18342,57544,72809,73836,78411,86155,170076,172498,
#Partially deleted in new
chr3	179801522	179974211	chr3:179801522-179974211	1	-	179801827	179898210	789624	15	510,158,166,198,71,144,117,96,97,124,195,112,105,72,196,	0,6151,6749,7948,10278,14338,18337,57539,72804,73831,78406,86150,96619,170071,172493,
#Partially deleted in new
chr3	179801648	179888191	chr3:179801648-179888191	0	-	179801648	179801648	8553170	12	384,158,166,198,71,144,117,96,97,124,112,72,	0,6025,6623,7822,10152,14212,18211,57413,72678,73705,86024,86471,
#Partially deleted in new
chr3	179801656	180036959	chr3:179801656-180036959	1	-	179801827	180036599	789624	13	376,158,166,198,71,144,117,96,97,124,195,112,381,	0,6017,6615,7814,10144,14204,18203,57405,72670,73697,78272,86016,234922,
#Partially deleted in new
chr3	179801738	179974078	chr3:179801738-179974078	1	-	179801827	179898210	789624	14	294,158,166,198,71,144,117,96,97,124,112,105,72,63,	0,5935,6533,7732,10062,14122,18121,57323,72588,73615,85934,96403,169855,172277,
#Partially deleted in new
chr3	179801816	180036926	chr3:179801816-180036926	1	-	179801827	180036599	789624	14	216,158,166,198,71,144,117,96,97,124,195,112,105,348,	0,5857,6455,7654,9984,14044,18043,57245,72510,73537,78112,85856,96325,234762,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	179804062	179804366	chr3:179804062-179804366	3	+	179804062	179804062	8553170	1	304,	0,
#Partially deleted in new
chr3	179809572	179820091	chr3:179809572-179820091	0	-	179809572	179809572	8553170	4	96,71,144,232,	0,2228,6288,10287,
#Partially deleted in new
chr3	179809593	179820555	chr3:179809593-179820555	0	-	179809593	179809593	8553170	5	75,71,144,117,138,	0,2207,6267,10266,10824,
#Partially deleted in new
chr3	179859096	179896174	chr3:179859096-179896174	0	-	179859096	179875406	789624	5	61,97,124,112,78,	0,15230,16257,28576,37000,
#Partially deleted in new
chr3	179874372	179895680	chr3:179874372-179895680	0	-	179874372	179875406	789624	5	51,124,195,112,81,	0,981,5556,13300,21227,
#Partially deleted in new
chr3	179875366	179973252	chr3:179875366-179973252	0	-	179875366	179973251	789624	5	111,195,112,72,94,	0,4562,12306,96227,97792,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	179875375	179881609	chr3:179875375-179881609	3	+	179875375	179875375	8553170	2	105,722,	0,5512,
#Partially deleted in new
chr3	179875443	179974211	chr3:179875443-179974211	0	-	179875443	179973251	789624	7	34,195,112,105,72,160,196,	0,4485,12229,22698,96150,97715,98572,
#Partially deleted in new
chr3	179879965	179974119	chr3:179879965-179974119	0	-	179879965	179879965	8553170	5	158,112,67,160,104,	0,7707,91628,93193,94050,
#Partially deleted in new
chr3	179898228	179921895	chr3:179898228-179921895	3	+	179898228	179898228	789624	3	123,161,346,	0,3697,23321,
#Partially deleted in new
chr3	179900672	180037035	chr3:179900672-180037035	0	-	179900672	179900672	8553170	3	63,67,457,	0,70921,135906,
#Deleted in new
chr3	180161885	180161977	chr3:180161885-180161977	7	-	180161885	180161885	16724991	1	92,	0,
#Deleted in new
chr3	180201158	180201212	chr3:180201158-180201212	7	+	180201158	180201158	16724991	1	54,	0,
#Deleted in new
chr3	180212190	180213108	chr3:180212190-180213108	7	+	180212190	180212190	16724991	1	918,	0,
#Partially deleted in new
chr3	180323106	180325059	chr3:180323106-180325059	7	+	180323106	180323106	16724991	1	1953,	0,
#Partially deleted in new
chr3	180414173	180422506	chr3:180414173-180422506	3	+	180414173	180414173	789624	2	284,656,	0,7677,
#Partially deleted in new
chr3	180414211	180422380	chr3:180414211-180422380	0	+	180414211	180414211	8553170	2	185,294,	0,7875,
#Deleted in new
chr3	180542700	180542836	chr3:180542700-180542836	3	+	180542700	180542700	8553170	1	136,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	180566717	180601935	chr3:180566717-180601935	3	-	180566717	180566717	8553170	3	144,330,89,	0,17630,35129,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	180581056	180581163	chr3:180581056-180581163	3	+	180581056	180581056	8553170	1	107,	0,
#Deleted in new
chr3	180589886	180590047	chr3:180589886-180590047	7	-	180589886	180589886	16724991	1	161,	0,
#Partially deleted in new
chr3	180602129	180610978	chr3:180602129-180610978	3	+	180602261	180610542	789624	12	293,125,200,85,130,156,72,120,123,118,110,1349,	0,761,994,2095,2348,2722,3636,4123,4351,5518,6571,7500,
#Deleted in new
chr3	180602188	180604160	chr3:180602188-180604160	0	+	180602261	180604160	789624	4	234,125,200,42,	0,702,935,1930,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	180602192	180610974	chr3:180602192-180610974	1	+	180602261	180607795	789624	10	230,125,200,85,130,156,72,120,123,3327,	0,698,931,2032,2285,2659,3573,4060,4288,5455,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	180602194	180610974	chr3:180602194-180610974	0	+	180602261	180603365	789624	5	228,125,3249,123,3327,	0,696,929,4286,5453,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	180602210	180610003	chr3:180602210-180610003	0	+	180602261	180607795	789624	11	212,125,200,85,130,156,72,120,123,624,1303,	0,680,913,2014,2267,2641,3555,4042,4270,5437,6490,
#Deleted in new
chr3	180602216	180604912	chr3:180602216-180604912	0	+	180602261	180604317	789624	6	206,125,200,114,130,61,	0,674,907,2008,2261,2635,
#Deleted in new
chr3	180602505	180605007	chr3:180602505-180605007	0	+	180603137	180605007	789624	6	45,125,200,85,130,156,	0,385,618,1719,1972,2346,
#Deleted in new
chr3	180602561	180604607	chr3:180602561-180604607	0	+	180603137	180604607	789624	5	166,125,200,85,130,	0,329,562,1663,1916,
#Partially deleted in new
chr3	180602857	180616652	chr3:180602857-180616652	0	-	180613858	180616652	789624	5	134,51,82,83,137,	0,10956,12138,13423,13658,
#Partially deleted in new
chr3	180608162	180610168	chr3:180608162-180610168	0	+	180608162	180608162	8553170	3	109,110,539,	0,538,1467,
#Partially deleted in new
chr3	180609502	180616617	chr3:180609502-180616617	0	-	180613845	180616617	789624	4	298,51,83,102,	0,4311,6778,7013,
#Deleted in new
chr3	180609870	180610980	chr3:180609870-180610980	0	+	180609870	180609870	8553170	2	133,275,	0,835,
#Partially deleted in new
chr3	180614007	180737874	chr3:180614007-180737874	3	-	180619347	180679380	789624	25	1070,83,180,141,107,124,209,138,165,195,133,104,192,129,93,159,147,120,92,192,137,27,73,59,382,	0,2273,2508,2818,5251,17461,27985,30112,33071,34157,37393,38155,40754,45444,45669,46562,47853,49859,65283,65600,94760,97185,97302,111507,123485,
#Partially deleted in new
chr3	180614587	180679500	chr3:180614587-180679500	3	-	180614920	180679380	789624	20	490,83,180,141,107,160,124,209,138,165,195,133,104,192,129,93,159,147,120,210,	0,1693,1928,2238,4671,5223,16881,27405,29532,32491,33577,36813,37575,40174,44864,45089,45982,47273,49279,64703,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	180661871	180870933	chr3:180661871-180870933	0	-	180661871	180748281	789624	7	136,120,71,63,141,118,134,	0,1995,86374,89476,120112,185635,208928,
#Partially deleted in new
chr3	180680083	180700449	chr3:180680083-180700449	3	+	180680083	180680083	8553170	2	107,176,	0,20190,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	180707588	180870178	chr3:180707588-180870178	3	-	180707588	180707588	789624	14	1316,27,73,59,204,120,322,164,74,63,141,61,118,132,	0,3604,3721,17926,25890,26898,29904,40291,40657,43759,74395,102821,139918,162458,
#Partially deleted in new
chr3	180708325	180871005	chr3:180708325-180871005	1	-	180708325	180708325	8553170	5	579,27,94,141,206,	0,2867,2984,73658,162474,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	180736404	180736703	chr3:180736404-180736703	3	-	180736404	180736404	8553170	1	299,	0,
#Deleted in new
chr3	180772749	180773914	chr3:180772749-180773914	7	-	180772749	180772749	16724991	1	1165,	0,
#Partially deleted in new
chr3	180820543	180821612	chr3:180820543-180821612	7	+	180820543	180820543	16724991	1	1069,	0,
#Deleted in new
chr3	180827976	180829850	chr3:180827976-180829850	7	-	180827976	180827976	16724991	1	1874,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	180868140	180949326	chr3:180868140-180949326	0	+	180947921	180949326	789624	5	155,72,149,94,100,	0,79724,80206,80580,81086,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	180868155	180948783	chr3:180868155-180948783	0	+	180947921	180948783	789624	6	140,53,94,72,149,63,	0,65178,66982,79709,80191,80565,
#Deleted in new
chr3	180887676	180888075	chr3:180887676-180888075	7	-	180887676	180887676	16724991	1	399,	0,
#Partially deleted in new
chr3	180912301	180982753	chr3:180912301-180982753	3	+	180912685	180976292	0	17	435,53,94,72,149,94,117,171,79,110,87,58,63,204,201,92,6632,	0,21032,22836,35563,36045,36419,36925,38996,41460,45517,49166,50581,50726,55749,57856,63011,63820,
#Partially deleted in new
chr3	180912481	180977155	chr3:180912481-180977155	1	+	180947921	180976292	0	18	255,344,53,94,72,149,94,117,171,79,110,87,58,63,204,201,92,1034,	0,2170,20852,22656,35383,35865,36239,36745,38816,41280,45337,48986,50401,50546,55569,57676,62831,63640,
#Partially deleted in new
chr3	180912490	180976579	chr3:180912490-180976579	0	+	180912490	180912490	8553170	15	246,53,72,149,94,117,171,79,110,87,208,204,201,92,458,	0,20843,35374,35856,36230,36736,38807,41271,45328,48977,50392,55560,57667,62822,63631,
#Partially deleted in new
chr3	180912537	180927813	chr3:180912537-180927813	1	+	180912685	180927656	789624	2	199,166,	0,15110,
#Partially deleted in new
chr3	180912670	180976545	chr3:180912670-180976545	1	+	180947921	180976138	789624	15	66,94,72,149,94,117,171,79,110,87,58,63,204,201,424,	0,22467,35194,35676,36050,36556,38627,41091,45148,48797,50212,50357,55380,57487,63451,
#Partially deleted in new
chr3	180912670	180948192	chr3:180912670-180948192	0	+	180912670	180912670	8553170	4	66,53,94,328,	0,20663,22467,35194,
#Partially deleted in new
chr3	180912670	180976418	chr3:180912670-180976418	1	+	180912685	180976138	789624	14	66,72,149,94,117,171,79,110,87,58,63,204,201,297,	0,35194,35676,36050,36556,38627,41091,45148,48797,50212,50357,55380,57487,63451,
#Partially deleted in new
chr3	180912671	180977155	chr3:180912671-180977155	1	+	180912685	180976138	0	16	65,53,94,72,149,94,117,171,79,110,87,58,63,204,201,1034,	0,20662,22466,35193,35675,36049,36555,38626,41090,45147,48796,50211,50356,55379,57486,63450,
#Partially deleted in new
chr3	180912677	180976553	chr3:180912677-180976553	0	+	180912677	180912677	8553170	15	59,53,94,72,149,94,117,171,79,110,87,208,204,201,432,	0,20656,22460,35187,35669,36043,36549,38620,41084,45141,48790,50205,55373,57480,63444,
#Partially deleted in new
chr3	180912684	180949339	chr3:180912684-180949339	0	+	180947921	180949339	789624	6	52,344,72,149,94,113,	0,1967,35180,35662,36036,36542,
#Partially deleted in new
chr3	180915433	180976378	chr3:180915433-180976378	1	+	180915516	180976292	789624	17	95,53,94,72,149,94,117,171,79,110,87,58,63,204,201,92,257,	0,17900,19704,32431,32913,33287,33793,35864,38328,42385,46034,47449,47594,52617,54724,59879,60688,
#Partially deleted in new
chr3	180915459	180948742	chr3:180915459-180948742	0	+	180915568	180948742	789624	6	172,53,94,72,149,22,	0,17874,19678,32405,32887,33261,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	180933035	180935196	chr3:180933035-180935196	0	+	180933035	180933035	8553170	2	351,59,	0,2102,
#Partially deleted in new
chr3	180951329	180954105	chr3:180951329-180954105	0	+	180951329	180951329	8553170	2	139,344,	0,2432,
#Partially deleted in new
chr3	180957526	180963081	chr3:180957526-180963081	0	+	180957526	180957526	8553170	4	402,87,58,54,	0,3941,5356,5501,
#Partially deleted in new
chr3	180957808	180968405	chr3:180957808-180968405	0	+	180957808	180957808	8553170	5	120,87,58,63,355,	0,3659,5074,5219,10242,
#Partially deleted in new
chr3	180957868	180970661	chr3:180957868-180970661	0	+	180957868	180957868	8553170	6	60,87,58,63,204,504,	0,3599,5014,5159,10182,12289,
#Partially deleted in new
chr3	180968050	180976282	chr3:180968050-180976282	0	+	180968050	180976282	789624	5	204,201,81,92,161,	0,2107,3024,7262,8071,
#Deleted in new
chr3	180970191	180971816	chr3:180970191-180971816	0	+	180970191	180970191	8553170	2	167,742,	0,883,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	180983708	180989774	chr3:180983708-180989774	3	-	180984639	180989602	789624	6	1002,71,80,74,52,175,	0,2217,3234,4314,4469,5891,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	180983772	180989703	chr3:180983772-180989703	0	-	180985981	180989602	789624	5	938,71,74,52,104,	0,2153,4250,4405,5827,
#Partially deleted in new
chr3	180984274	180989769	chr3:180984274-180989769	1	-	180985970	180989602	789624	6	436,71,25,74,52,170,	0,1651,2723,3748,3903,5325,
#Partially deleted in new
chr3	180984277	180989710	chr3:180984277-180989710	1	-	180984639	180988076	789624	5	433,71,80,74,111,	0,1648,2665,3745,5322,
#Partially deleted in new
chr3	180984525	180989667	chr3:180984525-180989667	1	-	180984639	180985950	789624	3	185,71,68,	0,1400,5074,
#Partially deleted in new
chr3	180984564	180989518	chr3:180984564-180989518	1	-	180984639	180988076	789624	6	146,71,80,74,52,187,	0,1361,2378,3458,3613,4767,
#Partially deleted in new
chr3	180984577	180989714	chr3:180984577-180989714	0	-	180985981	180988076	789624	6	133,71,75,74,52,115,	0,1348,2370,3445,3600,5022,
#Partially deleted in new
chr3	180985409	180989741	chr3:180985409-180989741	0	-	180985409	180985409	8553170	5	587,80,74,52,142,	0,1533,2613,2768,4190,
#Partially deleted in new
chr3	180986594	180989727	chr3:180986594-180989727	0	-	180986594	180986594	8553170	2	1502,128,	0,3005,
#Partially deleted in new
chr3	180987179	180989763	chr3:180987179-180989763	0	-	180987179	180987179	8553170	3	917,52,164,	0,998,2420,
#Partially deleted in new
chr3	180987585	180989774	chr3:180987585-180989774	0	-	180987585	180987585	8553170	2	644,175,	0,2014,
#Partially deleted in new
chr3	180989761	181117494	chr3:180989761-181117494	0	+	180989761	180989761	8553170	5	79,120,90,41,466,	0,40808,66935,99115,127267,
#Partially deleted in new
chr3	180989769	181057244	chr3:180989769-181057244	0	+	180989769	180989769	8553170	3	83,120,548,	0,40800,66927,
#Partially deleted in new
chr3	180989769	181699883	chr3:180989769-181699883	0	+	180989769	180989769	8553170	7	71,90,41,70,209,69,286,	0,66927,99107,185744,573950,621091,709828,
#Partially deleted in new
chr3	180989772	181058745	chr3:180989772-181058745	1	+	180989772	180989772	8553170	4	68,120,90,1344,	0,40797,66924,67629,
#Partially deleted in new
chr3	180989772	181176513	chr3:180989772-181176513	0	+	180989772	180989772	8553170	4	68,90,41,1000,	0,66924,99104,185741,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	180989774	181023250	chr3:180989774-181023250	1	+	180989774	180989774	8553170	3	66,159,3049,	0,14000,30427,
#Partially deleted in new
chr3	180989778	181740886	chr3:180989778-181740886	1	+	180989778	180989778	8553170	10	62,41,70,209,79,49,69,286,108,1318,	0,99098,185735,573941,611532,614513,621082,709819,725406,749790,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	180989786	181031971	chr3:180989786-181031971	0	+	180989786	180989786	8553170	2	66,1402,	0,40783,
#Partially deleted in new
chr3	180989789	181413069	chr3:180989789-181413069	0	+	180989789	180989789	8553170	5	51,90,41,70,140,	0,66907,99087,185724,423140,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	180989789	181130996	chr3:180989789-181130996	0	+	180989789	180989789	8553170	5	63,120,90,41,1076,	0,40780,66907,99087,140131,
#Partially deleted in new
chr3	180989815	181740820	chr3:180989815-181740820	1	+	180989815	180989815	8553170	6	25,41,70,209,169,1252,	0,99061,185698,573904,593758,749753,
#Partially deleted in new
chr3	181056679	181740025	chr3:181056679-181740025	0	+	181056679	181056679	789624	7	107,41,70,209,69,286,457,	0,32197,118834,507040,554181,642918,682889,
#Partially deleted in new
chr3	181056682	181564572	chr3:181056682-181564572	0	+	181056682	181056682	8553170	4	104,41,70,853,	0,32194,118831,507037,
#Partially deleted in new
chr3	181056684	181699784	chr3:181056684-181699784	0	+	181056684	181056684	8553170	5	102,41,70,209,187,	0,32192,118829,507035,642913,
#Partially deleted in new
chr3	181146232	181146463	chr3:181146232-181146463	7	+	181146232	181146232	16724991	1	231,	0,
#Partially deleted in new
chr3	181174889	181700044	chr3:181174889-181700044	1	+	181174889	181174889	8553170	6	378,70,209,69,169,447,	0,624,388830,435971,515944,524708,
#Partially deleted in new
chr3	181175024	181740814	chr3:181175024-181740814	1	+	181175024	181175024	8553170	6	354,70,209,69,286,1246,	0,489,388695,435836,524573,564544,
#Partially deleted in new
chr3	181175143	181739657	chr3:181175143-181739657	0	+	181175143	181175143	789624	5	124,70,209,69,89,	0,370,388576,435717,564425,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	181175168	181632180	chr3:181175168-181632180	1	+	181175168	181175168	8553170	5	210,70,209,69,1326,	0,345,388551,435692,455686,
#Deleted in new
chr3	181242344	181242901	chr3:181242344-181242901	7	-	181242344	181242344	16724991	2	125,276,	0,281,
#Partially deleted in new
chr3	181359484	181699637	chr3:181359484-181699637	0	+	181359484	181359484	8553170	4	331,209,69,40,	0,204235,251376,340113,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	181421057	181442486	chr3:181421057-181442486	3	-	181421057	181421057	789624	5	403,189,102,58,113,	0,670,17540,18919,21316,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	181461581	181742884	chr3:181461581-181742884	1	+	181461581	181461581	8553170	6	121,209,69,286,108,3316,	0,102138,149279,238016,253603,277987,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	181461583	181611647	chr3:181461583-181611647	0	+	181461583	181461583	8553170	3	119,209,787,	0,102136,149277,
#Deleted in new
chr3	181505074	181505879	chr3:181505074-181505879	7	-	181505074	181505074	16724991	1	805,	0,
#Partially deleted in new
chr3	181534176	181535874	chr3:181534176-181535874	0	-	181534176	181534176	8553170	3	285,397,90,	0,474,1608,
#Partially deleted in new
chr3	181534611	181535874	chr3:181534611-181535874	0	-	181534611	181534611	8553170	2	433,90,	0,1173,
#Partially deleted in new
chr3	181534614	181535881	chr3:181534614-181535881	0	-	181534614	181534614	8553170	2	433,97,	0,1170,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	181534632	181700611	chr3:181534632-181700611	3	-	181534632	181534632	8553170	7	415,116,117,58,144,325,73,	0,48089,81518,83313,122633,125206,165906,
#Partially deleted in new
chr3	181563455	181630890	chr3:181563455-181630890	0	+	181563455	181563455	8553170	3	473,69,36,	0,47405,67399,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	181563709	181671741	chr3:181563709-181671741	0	+	181563709	181563709	8553170	2	219,235,	0,107797,
#Partially deleted in new
chr3	181563720	181742473	chr3:181563720-181742473	1	+	181563720	181563720	8553170	5	208,69,286,108,2905,	0,47140,135877,151464,175848,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	181601157	181699883	chr3:181601157-181699883	0	+	181601157	181601157	8553170	4	232,69,150,286,	0,9703,29697,98440,
#Partially deleted in new
chr3	181610333	181739693	chr3:181610333-181739693	0	+	181610333	181610333	789624	3	412,69,125,	0,527,129235,
#Partially deleted in new
chr3	181610362	181741230	chr3:181610362-181741230	1	+	181610362	181610362	789624	5	383,69,286,108,1662,	0,498,89235,104822,129206,
#Deleted in new
chr3	181610468	181614654	chr3:181610468-181614654	1	+	181610468	181610468	8553170	3	277,73,1617,	0,388,2569,
#Deleted in new
chr3	181610497	181610729	chr3:181610497-181610729	3	+	181610497	181610497	8553170	1	232,	0,
#Partially deleted in new
chr3	181610522	181740686	chr3:181610522-181740686	0	+	181610522	181610522	789624	4	223,73,286,1118,	0,334,89075,129046,
#Partially deleted in new
chr3	181610523	181739873	chr3:181610523-181739873	0	+	181610523	181610523	8553170	4	222,69,286,305,	0,337,89074,129045,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	181610523	181673402	chr3:181610523-181673402	1	+	181610523	181610523	8553170	3	222,69,1985,	0,337,60894,
#Partially deleted in new
chr3	181610528	181790946	chr3:181610528-181790946	0	+	181610528	181610528	8553170	3	217,69,274,	0,332,180144,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	181610528	181621883	chr3:181610528-181621883	0	+	181610528	181610528	8553170	3	217,69,703,	0,332,10652,
#Partially deleted in new
chr3	181610608	181710295	chr3:181610608-181710295	0	+	181610608	181610608	8553170	4	137,69,286,487,	0,252,88989,99200,
#Partially deleted in new
chr3	181610769	181740686	chr3:181610769-181740686	0	+	181610769	181610769	8553170	4	160,286,108,1118,	0,88828,104415,128799,
#Deleted in new
chr3	181610860	181610929	chr3:181610860-181610929	0	+	181610860	181610860	8553170	1	69,	0,
#Partially deleted in new
chr3	181698643	181740765	chr3:181698643-181740765	0	+	181698643	181698643	8553170	3	17,286,1197,	0,954,40925,
#Partially deleted in new
chr3	181698809	181740863	chr3:181698809-181740863	1	+	181698809	181698809	8553170	4	322,286,108,1295,	0,788,16375,40759,
#Partially deleted in new
chr3	181699222	181740747	chr3:181699222-181740747	1	+	181699222	181699222	8553170	3	661,108,1179,	0,15962,40346,
#Partially deleted in new
chr3	181699492	181740079	chr3:181699492-181740079	0	+	181699492	181699492	8553170	2	391,511,	0,40076,
#Deleted in new
chr3	181699597	181700100	chr3:181699597-181700100	0	+	181699597	181699597	8553170	2	286,97,	0,406,
#Partially deleted in new
chr3	181699597	181739830	chr3:181699597-181739830	0	+	181699597	181699597	8553170	4	286,108,97,262,	0,15587,22604,39971,
#Partially deleted in new
chr3	181699597	181778661	chr3:181699597-181778661	0	+	181699597	181699597	8553170	3	286,168,127,	0,74650,78937,
#Partially deleted in new
chr3	181699597	181739721	chr3:181699597-181739721	0	+	181699597	181699597	8553170	3	286,168,153,	0,36777,39971,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	181699597	181783836	chr3:181699597-181783836	0	+	181699597	181699597	8553170	3	286,128,212,	0,78937,84027,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	181699597	181814303	chr3:181699597-181814303	0	+	181699597	181699597	8553170	3	286,135,91,	0,78937,114615,
#Partially deleted in new
chr3	181699597	181741195	chr3:181699597-181741195	0	+	181699597	181699597	8553170	2	47,789,	0,40809,
#Partially deleted in new
chr3	181699597	181790932	chr3:181699597-181790932	0	+	181699597	181699597	8553170	4	286,108,135,260,	0,15587,78937,91075,
#Partially deleted in new
chr3	181699597	181739670	chr3:181699597-181739670	0	+	181699597	181699597	8553170	4	286,108,168,102,	0,15587,36777,39971,
#Deleted in new
chr3	181699597	181709850	chr3:181699597-181709850	0	+	181699597	181699597	8553170	2	286,183,	0,10070,
#Partially deleted in new
chr3	181699597	181778604	chr3:181699597-181778604	0	+	181699597	181699597	8553170	4	286,108,155,70,	0,15587,74663,78937,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	181699597	181836638	chr3:181699597-181836638	0	+	181699597	181699597	8553170	3	286,304,182,	0,114615,136859,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	181699597	181779013	chr3:181699597-181779013	0	+	181699597	181699597	8553170	3	286,108,479,	0,15587,78937,
#Partially deleted in new
chr3	181699597	181790994	chr3:181699597-181790994	0	+	181699597	181699597	8553170	3	286,135,322,	0,78937,91075,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	181699597	181739823	chr3:181699597-181739823	0	+	181699597	181699597	8553170	4	286,108,149,255,	0,15587,32866,39971,
#Partially deleted in new
chr3	181699597	181791037	chr3:181699597-181791037	0	+	181699597	181699597	8553170	3	286,108,365,	0,15587,91075,
#Partially deleted in new
chr3	181699597	181836752	chr3:181699597-181836752	0	+	181699597	181699597	8553170	3	286,108,296,	0,15587,136859,
#Partially deleted in new
chr3	181699597	181791063	chr3:181699597-181791063	0	+	181699597	181699597	8553170	2	286,391,	0,91075,
#Partially deleted in new
chr3	181699597	181791003	chr3:181699597-181791003	0	+	181699597	181699597	8553170	3	286,128,331,	0,78937,91075,
#Partially deleted in new
chr3	181699598	181836805	chr3:181699598-181836805	0	+	181699598	181699598	8553170	3	285,128,349,	0,78936,136858,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	181699605	181740802	chr3:181699605-181740802	1	+	181699605	181699605	8553170	4	278,108,91,1234,	0,15579,37665,39963,
#Deleted in new
chr3	181699607	181699883	chr3:181699607-181699883	3	+	181699607	181699607	8553170	1	276,	0,
#Deleted in new
chr3	181699618	181702390	chr3:181699618-181702390	0	+	181699618	181699618	8553170	2	265,230,	0,2542,
#Partially deleted in new
chr3	181699618	181739761	chr3:181699618-181739761	1	+	181699618	181699618	8553170	4	265,108,94,193,	0,15566,22586,39950,
#Deleted in new
chr3	181699618	181702420	chr3:181699618-181702420	0	+	181699618	181699618	8553170	3	265,50,260,	0,1781,2542,
#Partially deleted in new
chr3	181699618	181736479	chr3:181699618-181736479	0	+	181699618	181699618	8553170	4	265,108,94,105,	0,15566,22586,36756,
#Deleted in new
chr3	181699618	181709602	chr3:181699618-181709602	0	+	181699618	181699618	8553170	2	265,689,	0,9295,
#Deleted in new
chr3	181699620	181707511	chr3:181699620-181707511	0	+	181699620	181699620	8553170	2	263,182,	0,7709,
#Partially deleted in new
chr3	181699836	181740823	chr3:181699836-181740823	1	+	181699836	181699836	8553170	5	47,108,97,168,1255,	0,15348,22365,36538,39732,
#Partially deleted in new
chr3	181699839	181836880	chr3:181699839-181836880	0	+	181699839	181699839	8553170	2	44,424,	0,136617,
#Partially deleted in new
chr3	181701426	181740237	chr3:181701426-181740237	0	+	181701426	181701426	8553170	2	23,669,	0,38142,
#Partially deleted in new
chr3	181711101	181740872	chr3:181711101-181740872	0	+	181711101	181711101	8553170	3	264,108,1304,	0,4083,28467,
#Deleted in new
chr3	181711923	181714436	chr3:181711923-181714436	3	+	181712360	181713314	0	1	2513,	0,
#Deleted in new
chr3	181715184	181715293	chr3:181715184-181715293	3	+	181715184	181715184	8553170	1	109,	0,
#Partially deleted in new
chr3	181723192	181740840	chr3:181723192-181740840	0	+	181723192	181723192	8553170	2	431,1272,	0,16376,
#Partially deleted in new
chr3	181725975	181740737	chr3:181725975-181740737	0	+	181725975	181725975	8553170	2	110,1169,	0,13593,
#Partially deleted in new
chr3	181727024	181742417	chr3:181727024-181742417	1	+	181727024	181727024	8553170	2	71,2849,	0,12544,
#Partially deleted in new
chr3	181727717	181740681	chr3:181727717-181740681	0	+	181727717	181727717	8553170	2	331,1113,	0,11851,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	181813400	181813702	chr3:181813400-181813702	3	+	181813400	181813400	8553170	1	302,	0,
#Deleted in new
chr3	181847525	181847885	chr3:181847525-181847885	7	-	181847525	181847525	16724991	1	360,	0,
#Partially deleted in new
chr3	181866350	181867154	chr3:181866350-181867154	7	-	181866350	181866350	16724991	2	251,239,	0,565,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	181952342	182010678	chr3:181952342-182010678	1	+	181952342	181952342	789624	8	128,191,75,170,150,318,643,7905,	0,1204,19489,20001,20853,47846,48775,50431,
#Partially deleted in new
chr3	181952348	181972497	chr3:181952348-181972497	0	+	181952348	181952348	8553170	5	122,191,171,75,154,	0,1198,19215,19483,19995,
#Partially deleted in new
chr3	181952369	181972497	chr3:181952369-181972497	0	+	181952369	181952369	8553170	5	101,230,156,75,154,	0,1157,19194,19462,19974,
#Partially deleted in new
chr3	181952372	182000262	chr3:181952372-182000262	1	+	181952372	181952372	8553170	7	98,211,171,75,170,150,74,	0,1154,19191,19459,19971,20823,47816,
#Partially deleted in new
chr3	181952373	181973345	chr3:181952373-181973345	0	+	181952373	181952373	8553170	5	97,211,75,170,150,	0,1153,19458,19970,20822,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	181952377	181972497	chr3:181952377-181972497	0	+	181952377	181952377	8553170	4	546,211,75,154,	0,1149,19454,19966,
#Partially deleted in new
chr3	181952384	181957292	chr3:181952384-181957292	0	+	181952384	181952384	8553170	3	86,211,192,	0,1142,4716,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	181952385	182003122	chr3:181952385-182003122	1	+	181952385	181952385	8553170	3	85,150,2005,	0,20810,48732,
#Partially deleted in new
chr3	181952388	181972469	chr3:181952388-181972469	0	+	181952388	181952388	8553170	4	82,211,343,126,	0,1138,19175,19955,
#Partially deleted in new
chr3	181952389	181963521	chr3:181952389-181963521	1	+	181952389	181952389	8553170	3	81,230,145,	0,1137,10987,
#Partially deleted in new
chr3	181952389	181972470	chr3:181952389-181972470	0	+	181952389	181952389	8553170	6	81,239,82,171,75,127,	0,1137,15475,19174,19442,19954,
#Partially deleted in new
chr3	181952389	182001329	chr3:181952389-182001329	0	+	181952389	181952389	8553170	7	81,211,75,170,150,318,212,	0,1137,19442,19954,20806,47799,48728,
#Partially deleted in new
chr3	181952391	181972470	chr3:181952391-181972470	0	+	181952391	181952391	8553170	5	79,239,89,75,127,	0,1135,15466,19440,19952,
#Partially deleted in new
chr3	181952403	181971879	chr3:181952403-181971879	1	+	181952403	181952403	8553170	4	67,211,156,48,	0,1123,19160,19428,
#Partially deleted in new
chr3	181952414	181972497	chr3:181952414-181972497	0	+	181952414	181952414	8553170	6	56,147,89,171,75,154,	0,1204,15443,19149,19417,19929,
#Partially deleted in new
chr3	181952417	181972497	chr3:181952417-181972497	0	+	181952417	181952417	8553170	5	53,230,171,75,154,	0,1109,19146,19414,19926,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	181952596	181972497	chr3:181952596-181972497	0	+	181952596	181952596	8553170	4	327,191,75,154,	0,950,19235,19747,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	181952616	181972496	chr3:181952616-181972496	0	+	181952616	181952616	8553170	5	307,211,171,75,153,	0,910,18947,19215,19727,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	181952683	181972497	chr3:181952683-181972497	0	+	181952683	181952683	8553170	5	240,211,156,75,154,	0,843,18880,19148,19660,
#Partially deleted in new
chr3	181953563	181972497	chr3:181953563-181972497	0	+	181953563	181953563	8553170	5	174,194,171,75,154,	0,3537,18000,18268,18780,
#Partially deleted in new
chr3	181956802	181972497	chr3:181956802-181972497	0	+	181956802	181956802	8553170	4	492,171,75,154,	0,14761,15029,15541,
#Partially deleted in new
chr3	181965982	181972492	chr3:181965982-181972492	0	+	181965982	181965982	8553170	6	32,176,230,156,75,149,	0,1003,1340,5581,5849,6361,
#Partially deleted in new
chr3	181967322	181972438	chr3:181967322-181972438	0	+	181967322	181967322	8553170	4	624,171,75,95,	0,4241,4509,5021,
#Partially deleted in new
chr3	181967857	181972470	chr3:181967857-181972470	0	+	181967857	181967857	8553170	3	89,75,127,	0,3974,4486,
#Deleted in new
chr3	181968458	181968681	chr3:181968458-181968681	3	+	181968458	181968458	8553170	1	223,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	181971210	181973290	chr3:181971210-181973290	0	+	181971210	181971210	8553170	4	509,75,170,95,	0,621,1133,1985,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	181971213	181972470	chr3:181971213-181972470	2	+	181971213	181971213	8553170	3	521,75,127,	0,618,1130,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	181971228	181973335	chr3:181971228-181973335	1	+	181971228	181971228	8553170	3	678,170,140,	0,1115,1967,
#Partially deleted in new
chr3	181972420	182002916	chr3:181972420-182002916	0	+	181972420	181972420	8553170	4	93,150,250,143,	0,775,28697,30353,
#Partially deleted in new
chr3	181972427	182001353	chr3:181972427-182001353	1	+	181972427	181972427	8553170	4	86,150,399,236,	0,768,27680,28690,
#Partially deleted in new
chr3	181972444	182001316	chr3:181972444-182001316	1	+	181972444	181972444	8553170	5	69,150,122,318,199,	0,751,11925,27744,28673,
#Partially deleted in new
chr3	181984369	182001771	chr3:181984369-182001771	1	+	181984369	181984369	8553170	3	62,104,654,	0,354,16748,
#Deleted in new
chr3	181999788	182001246	chr3:181999788-182001246	0	+	181999788	181999788	8553170	2	657,129,	0,1329,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	182000198	182003091	chr3:182000198-182003091	1	+	182000198	182000198	8553170	3	310,250,318,	0,919,2575,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	182000300	182003087	chr3:182000300-182003087	0	+	182000300	182000300	8553170	3	206,250,314,	0,817,2473,
#Partially deleted in new
chr3	182000306	182004063	chr3:182000306-182004063	0	+	182000306	182000306	8553170	3	200,250,253,	0,811,3504,
#Partially deleted in new
chr3	182000472	182004047	chr3:182000472-182004047	0	+	182000472	182000472	8553170	3	36,250,237,	0,645,3338,
#Deleted in new
chr3	182000784	182002883	chr3:182000784-182002883	0	+	182000784	182000784	8553170	2	583,110,	0,1989,
#Partially deleted in new
chr3	182121883	182142137	chr3:182121883-182142137	3	+	182121883	182121883	8553170	2	314,163,	0,20091,
#Deleted in new
chr3	182365146	182368256	chr3:182365146-182368256	3	+	182365146	182365146	8553170	2	189,139,	0,2971,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	182446969	182486364	chr3:182446969-182486364	3	-	182446969	182446969	789624	4	1445,112,80,171,	0,1758,24132,39224,
#Deleted in new
chr3	182460416	182461072	chr3:182460416-182461072	7	-	182460416	182460416	16724991	1	656,	0,
#Partially deleted in new
chr3	182498263	182507124	chr3:182498263-182507124	3	-	182498263	182498263	789624	4	160,376,43,42,	0,5815,6408,8819,
#Deleted in new
chr3	182610673	182611414	chr3:182610673-182611414	7	+	182610673	182610673	16724991	1	741,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	182644213	182655880	chr3:182644213-182655880	3	+	182644213	182644213	8553170	5	102,106,207,118,59,	0,254,604,5669,11608,
#Deleted in new
chr3	182691927	182692285	chr3:182691927-182692285	7	+	182691927	182691927	16724991	1	358,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	182739668	182740848	chr3:182739668-182740848	3	-	182739668	182739668	8553170	1	1180,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	182783235	182793394	chr3:182783235-182793394	3	-	182783235	182783235	8553170	2	1630,247,	0,9912,
#Partially deleted in new
chr3	182793499	182921635	chr3:182793499-182921635	3	+	182793759	182918104	789624	30	287,117,90,81,108,129,104,48,65,82,151,198,243,176,69,74,104,182,204,154,103,146,60,128,139,66,104,166,134,3613,	0,26760,34620,36172,42535,42842,43571,48575,51958,54976,64378,65662,71956,72768,73876,75578,75728,78856,80312,85996,87379,91253,92451,94086,95910,103200,103803,105107,120361,124523,
#Partially deleted in new
chr3	182793502	182836624	chr3:182793502-182836624	1	+	182793759	182836506	789624	6	284,117,90,81,108,283,	0,26757,34617,36169,42532,42839,
#Partially deleted in new
chr3	182833672	182848557	chr3:182833672-182848557	0	+	182833672	182833672	8553170	7	202,108,129,104,48,65,82,	0,2362,2669,3398,8402,11785,14803,
#Partially deleted in new
chr3	182837116	182918341	chr3:182837116-182918341	0	+	182837116	182913966	789624	25	58,48,65,82,151,198,243,176,69,74,104,182,204,154,103,146,60,128,139,66,104,166,86,134,319,	0,4958,8341,11359,20761,22045,28339,29151,30259,31961,32111,35239,36695,42379,43762,47636,48834,50469,52293,59583,60186,61490,65364,76744,80906,
#Deleted in new
chr3	182843520	182844619	chr3:182843520-182844619	7	-	182843520	182843520	16724991	1	1099,	0,
#Partially deleted in new
chr3	182865526	182914103	chr3:182865526-182914103	0	+	182865526	182865526	8553170	17	172,176,69,74,104,182,204,154,103,146,60,128,139,66,104,166,243,	0,741,1849,3551,3701,6829,8285,13969,15352,19226,20424,22059,23883,31173,31776,33080,48334,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	182873965	182919063	chr3:182873965-182919063	0	+	182873965	182884806	789624	14	50,154,69,146,60,128,139,66,104,166,86,47,134,1041,	0,5530,6913,10787,11985,13620,15444,22734,23337,24641,28515,34493,39895,44057,
#Partially deleted in new
chr3	182879538	182897325	chr3:182879538-182897325	0	+	182879538	182897325	789624	7	111,103,146,128,139,66,23,	0,1340,5214,8047,9871,17161,17764,
#Partially deleted in new
chr3	182897301	182915249	chr3:182897301-182915249	0	+	182897301	182914031	789624	3	105,166,1389,	0,1305,16559,
#Partially deleted in new
chr3	182898606	182914096	chr3:182898606-182914096	0	+	182898606	182913966	789624	3	166,86,236,	0,3874,15254,
#Partially deleted in new
chr3	182898684	182913978	chr3:182898684-182913978	0	+	182898684	182898684	8553170	4	88,86,126,118,	0,3796,7109,15176,
#Partially deleted in new
chr3	182921239	182921938	chr3:182921239-182921938	3	-	182921239	182921239	8553170	1	699,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	182938073	182980643	chr3:182938073-182980643	3	-	182945093	182980489	0	7	7100,97,83,131,169,217,157,	0,9164,9476,23152,25807,27463,42413,
#Partially deleted in new
chr3	182942775	182980538	chr3:182942775-182980538	1	-	182945093	182965711	789624	7	2398,97,83,131,169,217,52,	0,4462,4774,18450,21105,22761,37711,
#Partially deleted in new
chr3	182945033	182985953	chr3:182945033-182985953	1	-	182945093	182965711	789624	7	140,97,83,131,169,217,133,	0,2204,2516,16192,18847,20503,40787,
#Partially deleted in new
chr3	182945103	182980520	chr3:182945103-182980520	0	-	182964019	182980489	789624	7	70,97,83,131,169,75,34,	0,2134,2446,16122,18777,20575,35383,
#Partially deleted in new
chr3	182961314	182980151	chr3:182961314-182980151	0	-	182961314	182965711	789624	4	42,169,217,76,	0,2566,4222,18761,
#Partially deleted in new
chr3	182963947	182985931	chr3:182963947-182985931	0	-	182963947	182965711	789624	4	102,217,101,140,	0,1589,16887,21844,
#Partially deleted in new
chr3	182963999	182985913	chr3:182963999-182985913	0	-	182963999	182965711	789624	4	50,217,101,93,	0,1537,16835,21821,
#Partially deleted in new
chr3	183015217	183099587	chr3:183015217-183099587	3	-	183015437	183099440	0	19	349,72,108,138,50,87,217,110,184,128,82,112,122,148,122,96,137,47,236,	0,2048,4912,7199,10537,18773,22000,23808,26349,30195,36941,42093,55781,55992,57148,71475,77191,79341,84134,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr3	183015217	183116075	chr3:183015217-183116075	1	-	183015437	183086734	789624	18	349,72,108,138,50,87,217,110,184,128,82,112,122,148,122,96,47,602,	0,2048,4912,7199,10537,18773,22000,23808,26349,30195,36941,42093,55781,55992,57148,71475,79341,100256,
#Partially deleted in new
chr3	183015219	183099530	chr3:183015219-183099530	0	-	183086780	183099440	789624	17	347,72,108,138,50,87,217,110,184,128,82,112,122,148,96,47,179,	0,2046,4910,7197,10535,18771,21998,23806,26347,30193,36939,42091,55779,55990,71473,79339,84132,
#Partially deleted in new
chr3	183015219	183099577	chr3:183015219-183099577	1	-	183015437	183086734	789624	19	347,72,108,138,50,87,217,110,184,128,82,112,122,138,9,96,137,47,226,	0,2046,4910,7197,10535,18771,21998,23806,26347,30193,36939,42091,55779,55990,56129,71473,77189,79339,84132,
#Partially deleted in new
chr3	183015219	183099577	chr3:183015219-183099577	1	-	183034035	183094580	789624	18	347,72,108,138,50,87,110,184,128,82,112,122,148,122,96,137,47,226,	0,2046,4910,7197,10535,18771,23806,26347,30193,36939,42091,55779,55990,57146,71473,77189,79339,84132,
#Partially deleted in new
chr3	183015288	183022717	chr3:183015288-183022717	0	-	183015288	183015288	8553170	4	278,72,108,301,	0,1977,4841,7128,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr3	183015288	183099243	chr3:183015288-183099243	0	-	183034035	183094580	789624	19	278,72,108,138,50,97,87,110,184,128,82,112,122,148,122,96,137,47,756,	0,1977,4841,7128,10466,13804,18702,23737,26278,30124,36870,42022,55710,55921,57077,71404,77120,79270,83199,
#Partially deleted in new
chr3	183015550	183099518	chr3:183015550-183099518	0	-	183072437	183099440	789624	16	16,72,108,138,87,217,110,184,128,82,112,122,148,122,47,167,	0,1715,4579,6866,18440,21667,23475,26016,29862,36608,41760,55448,55659,56815,79008,83801,
#Partially deleted in new
chr3	183020169	183099550	chr3:183020169-183099550	0	-	183020169	183099440	789624	16	68,138,50,87,217,110,184,128,82,112,122,148,122,92,47,199,	0,2247,5585,13821,17048,18856,21397,25243,31989,37141,50829,51040,52196,66523,74389,79182,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	183022468	183037355	chr3:183022468-183037355	0	-	183022468	183022468	8553170	5	86,50,97,87,138,	0,3286,6624,11522,14749,
#Partially deleted in new
chr3	183071005	183099523	chr3:183071005-183099523	0	-	183072405	183099440	789624	4	115,148,122,172,	0,204,1360,28346,
#Partially deleted in new
chr3	183071045	183099518	chr3:183071045-183099518	0	-	183072437	183099440	789624	5	75,148,122,47,167,	0,164,1320,23513,28306,
#Partially deleted in new
chr3	183071047	183099530	chr3:183071047-183099530	0	-	183086780	183099440	789624	5	97,148,96,47,179,	0,162,15645,23511,28304,
#Partially deleted in new
chr3	183072426	183099495	chr3:183072426-183099495	0	-	183090965	183099440	789624	6	61,96,96,137,47,144,	0,14266,18509,19982,22132,26925,
#Partially deleted in new
chr3	183092372	183094607	chr3:183092372-183094607	0	-	183092372	183092372	8553170	2	173,49,	0,2186,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	183122212	183162911	chr3:183122212-183162911	3	-	183124080	183162655	0	6	2002,171,58,129,710,305,	0,13504,18325,30162,31469,40394,
#Partially deleted in new
chr3	183123924	183162015	chr3:183123924-183162015	1	-	183124080	183154368	789624	6	290,171,58,129,710,95,	0,11792,16613,28450,29757,37996,
#Partially deleted in new
chr3	183153900	183163839	chr3:183153900-183163839	0	-	183153900	183162655	789624	3	491,124,220,	0,8706,9719,
#Partially deleted in new
chr3	183153939	183162882	chr3:183153939-183162882	0	-	183153939	183154368	789624	3	452,101,276,	0,6917,8667,
#Partially deleted in new
chr3	183158112	183163838	chr3:183158112-183163838	0	-	183158112	183158112	8553170	4	20,106,124,219,	0,2744,4494,5507,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr3	183178042	183428275	chr3:183178042-183428275	3	-	183179379	183427977	789624	30	1461,116,89,98,34,79,93,216,126,69,93,93,70,116,67,86,101,178,192,192,120,115,125,150,117,120,91,115,84,374,	0,1534,2028,14956,17179,27833,28079,29565,37926,41813,45303,46055,50254,51623,52908,98829,111077,117257,118933,121962,131673,132872,133605,140025,145192,160757,163497,201254,211653,249859,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr3	183178049	183427977	chr3:183178049-183427977	1	-	183179572	183427977	789624	29	1643,89,98,34,79,93,216,126,69,93,93,70,116,67,86,101,178,192,192,120,115,125,150,117,120,91,115,84,76,	0,2021,14949,17172,27826,28072,29558,37919,41806,45296,46048,50247,51616,52901,98822,111070,117250,118926,121955,131666,132865,133598,140018,145185,160750,163490,201247,211646,249852,
#Deleted in new
chr3	183179288	183180313	chr3:183179288-183180313	0	-	183179288	183179288	8553170	3	215,116,243,	0,288,782,
#Deleted in new
chr3	183179369	183180311	chr3:183179369-183180311	0	-	183179369	183179369	8553170	2	323,241,	0,701,
#Partially deleted in new
chr3	183182501	183207700	chr3:183182501-183207700	0	-	183182501	183182501	8553170	6	192,98,34,79,93,93,	0,10497,12720,23374,23620,25106,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr3	183192648	183400548	chr3:183192648-183400548	0	-	183192648	183192648	8553170	28	448,34,79,93,216,126,69,93,4269,116,67,79,86,101,178,192,192,120,140,115,125,150,117,120,91,115,84,198,	0,2573,13227,13473,14959,23320,27207,30697,31449,37017,38302,38485,84223,96471,102651,104327,107356,117067,117867,118266,118999,125419,130586,146151,148891,186648,197047,207702,
#Partially deleted in new
chr3	183228125	183428085	chr3:183228125-183428085	1	-	183228275	183427977	789624	18	241,116,67,86,101,178,192,192,120,115,125,150,117,120,91,115,84,184,	0,1540,2825,48746,60994,67174,68850,71879,81590,82789,83522,89942,95109,110674,113414,151171,161570,199776,
#Partially deleted in new
chr3	183253243	183273391	chr3:183253243-183273391	3	+	183269798	183270935	789624	2	229,3894,	0,16254,
#Partially deleted in new
chr3	183253282	183269778	chr3:183253282-183269778	0	+	183253282	183253282	8553170	2	280,281,	0,16215,
#Partially deleted in new
chr3	183253352	183296311	chr3:183253352-183296311	0	+	183253352	183253352	8553170	3	120,264,166,	0,34252,42793,
#Partially deleted in new
chr3	183253554	183269984	chr3:183253554-183269984	0	+	183269798	183269984	789624	2	121,487,	0,15943,
#Partially deleted in new
chr3	183253794	183272426	chr3:183253794-183272426	1	+	183269798	183270935	789624	2	439,2929,	0,15703,
#Partially deleted in new
chr3	183254624	183270042	chr3:183254624-183270042	0	+	183269798	183270042	789624	2	139,545,	0,14873,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	183258299	183258416	chr3:183258299-183258416	7	-	183258299	183258299	16724991	1	117,	0,
#Partially deleted in new
chr3	183265245	183269724	chr3:183265245-183269724	0	+	183265245	183265245	8553170	3	329,159,227,	0,720,4252,
#Partially deleted in new
chr3	183265301	183271041	chr3:183265301-183271041	1	+	183269798	183270935	789624	2	222,1544,	0,4196,
#Partially deleted in new
chr3	183265310	183269788	chr3:183265310-183269788	0	+	183265310	183265310	8553170	3	213,159,291,	0,655,4187,
#Partially deleted in new
chr3	183265320	183269680	chr3:183265320-183269680	0	+	183265320	183265320	8553170	3	186,159,183,	0,645,4177,
#Partially deleted in new
chr3	183265343	183269948	chr3:183265343-183269948	0	+	183269798	183269948	789624	2	163,451,	0,4154,
#Partially deleted in new
chr3	183272019	183428101	chr3:183272019-183428101	1	-	183273039	183427977	789624	16	1045,86,101,178,192,192,120,115,125,150,117,120,91,115,84,200,	0,4852,17100,23280,24956,27985,37696,38895,39628,46048,51215,66780,69520,107277,117676,155882,
#Partially deleted in new
chr3	183276665	183295366	chr3:183276665-183295366	0	-	183276665	183276665	8553170	3	292,101,67,	0,12454,18634,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	183287479	183298504	chr3:183287479-183298504	0	+	183287479	183287479	8553170	2	389,2359,	0,8666,
#Partially deleted in new
chr3	183298426	183400493	chr3:183298426-183400493	0	-	183298426	183298426	8553170	12	1770,120,140,115,125,150,117,120,91,115,84,143,	0,11289,12089,12488,13221,19641,24808,40373,43113,80870,91269,101924,
#Partially deleted in new
chr3	183299768	183311027	chr3:183299768-183311027	0	-	183299768	183299768	8553170	3	428,120,113,	0,9947,11146,
#Partially deleted in new
chr3	183310914	183400548	chr3:183310914-183400548	0	-	183310914	183400531	789624	9	115,125,150,117,120,91,115,84,198,	0,733,7153,12320,27885,30625,68382,78781,89436,
#Partially deleted in new
chr3	183338828	183428778	chr3:183338828-183428778	0	-	183338828	183389771	789624	5	91,91,115,84,189,	0,2711,40468,50867,89761,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	183372018	183400539	chr3:183372018-183400539	0	-	183372018	183372018	8553170	3	7393,84,189,	0,17677,28332,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	183447607	183456013	chr3:183447607-183456013	7	+	183447607	183447607	16724991	4	158,435,82,815,	0,4470,6404,7591,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	183447650	183455625	chr3:183447650-183455625	4	+	183447650	183447650	16724991	4	297,435,82,427,	0,4427,6361,7548,
#Partially deleted in new
chr3	183451740	183455335	chr3:183451740-183455335	5	+	183451740	183451740	16724991	4	82,115,79,145,	0,630,2274,3450,
#Deleted in new
chr3	183451856	183451988	chr3:183451856-183451988	3	+	183451856	183451856	5263520	1	132,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	183452566	183452764	chr3:183452566-183452764	3	+	183452566	183452566	8553170	1	198,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	183453642	183455541	chr3:183453642-183455541	4	+	183453642	183453642	16724991	2	451,343,	0,1556,
#Deleted in new
chr3	183453813	183453944	chr3:183453813-183453944	3	+	183453813	183453813	8553170	1	131,	0,
#Deleted in new
chr3	183454127	183454262	chr3:183454127-183454262	3	+	183454127	183454127	8553170	1	135,	0,
#Deleted in new
chr3	183462850	183463201	chr3:183462850-183463201	7	-	183462850	183462850	16724991	1	351,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	183487530	183555689	chr3:183487530-183555689	3	-	183491926	183555653	789624	7	4698,214,203,238,450,166,329,	0,4963,6548,12059,20528,40314,67830,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	183487550	183555620	chr3:183487550-183555620	0	-	183491926	183555620	789624	8	3061,861,214,203,238,450,166,260,	0,3817,4943,6528,12039,20508,40294,67810,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	183491009	183555665	chr3:183491009-183555665	0	-	183491009	183491009	8553170	4	3272,450,166,305,	0,17049,36835,64351,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	183520211	183544785	chr3:183520211-183544785	0	-	183520211	183520211	8553170	4	1570,838,166,204,	0,2087,7633,24370,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	183548734	183552326	chr3:183548734-183552326	3	+	183548734	183548734	789624	2	229,274,	0,3318,
#Partially deleted in new
chr3	183613619	183616742	chr3:183613619-183616742	7	+	183613619	183613619	16724991	3	926,410,1090,	0,1225,2033,
#Partially deleted in new
chr3	183635567	183679478	chr3:183635567-183679478	1	+	183650356	183679286	789624	8	226,63,981,185,119,189,189,393,	0,7912,14728,27890,29353,35466,36728,43518,
#Partially deleted in new
chr3	183635609	183650738	chr3:183635609-183650738	0	+	183650356	183650738	789624	2	184,443,	0,14686,
#Partially deleted in new
chr3	183635619	183650707	chr3:183635619-183650707	0	+	183650356	183650707	789624	3	128,63,412,	0,7860,14676,
#Partially deleted in new
chr3	183635622	183650697	chr3:183635622-183650697	0	+	183650356	183650697	789624	2	160,402,	0,14673,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	183635622	183684477	chr3:183635622-183684477	3	+	183650356	183679286	789624	9	171,91,63,981,185,119,189,189,5392,	0,598,7857,14673,27835,29298,35411,36673,43463,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	183635622	183643231	chr3:183635622-183643231	0	+	183635622	183635622	8553170	3	171,91,325,	0,598,7284,
#Partially deleted in new
chr3	183635622	183650590	chr3:183635622-183650590	0	+	183650356	183650590	789624	4	125,91,63,295,	0,598,7857,14673,
#Partially deleted in new
chr3	183635622	183650575	chr3:183635622-183650575	0	+	183650356	183650575	789624	3	171,91,280,	0,598,14673,
#Partially deleted in new
chr3	183635622	183650758	chr3:183635622-183650758	0	+	183650356	183650758	789624	2	125,463,	0,14673,
#Deleted in new
chr3	183635634	183636450	chr3:183635634-183636450	0	+	183635634	183635634	8553170	2	159,230,	0,586,
#Partially deleted in new
chr3	183635642	183671123	chr3:183635642-183671123	0	+	183635642	183635642	8553170	4	151,185,119,90,	0,27815,29278,35391,
#Partially deleted in new
chr3	183636570	183650733	chr3:183636570-183650733	0	+	183650356	183650733	789624	3	112,63,438,	0,6909,13725,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	183650356	183673008	chr3:183650356-183673008	1	+	183650356	183672496	789624	5	920,185,119,189,713,	0,13101,14564,20677,21939,
#Partially deleted in new
chr3	183664100	183672484	chr3:183664100-183672484	0	+	183664100	183664100	8553170	4	33,119,189,189,	0,820,6933,8195,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr3	183697817	183812625	chr3:183697817-183812625	3	+	183715162	183810583	0	31	176,119,98,93,246,113,162,112,45,181,240,162,104,108,183,259,162,209,159,177,184,129,99,103,74,80,202,227,75,74,2151,	0,17326,19833,20682,24073,26601,30872,38900,49854,54255,56308,58710,61044,63689,64279,74487,75815,78097,79724,88307,92979,100105,101073,102648,103637,105438,106169,109048,110212,111279,112657,
#Partially deleted in new
chr3	183775990	183793486	chr3:183775990-183793486	0	+	183775990	183793120	789624	5	133,159,177,184,371,	0,1551,10134,14806,17125,
#Partially deleted in new
chr3	183797995	183801692	chr3:183797995-183801692	0	+	183797995	183797995	8553170	4	56,99,103,238,	0,895,2470,3459,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	183800976	183812623	chr3:183800976-183812623	0	+	183800976	183800976	8553170	5	3212,227,75,74,2149,	0,5889,7053,8120,9498,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	183806456	183809515	chr3:183806456-183809515	3	-	183806456	183806456	8553170	2	1656,786,	0,2273,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	183807907	183810783	chr3:183807907-183810783	0	-	183807907	183807907	8553170	3	205,123,765,	0,822,2111,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	183807907	183810548	chr3:183807907-183810548	0	-	183807907	183807907	8553170	3	205,99,530,	0,822,2111,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	183807907	183809409	chr3:183807907-183809409	0	-	183807907	183807907	8553170	2	269,680,	0,822,
#Partially deleted in new
chr3	183808023	183809479	chr3:183808023-183809479	0	+	183808023	183808023	8553170	2	81,383,	0,1073,
#Deleted in new
chr3	183808932	183810808	chr3:183808932-183810808	0	+	183808932	183808932	8553170	2	238,334,	0,1542,
#Partially deleted in new
chr3	183815567	183884889	chr3:183815567-183884889	3	-	183817355	183884846	789624	11	1869,118,98,102,71,150,96,49,141,196,168,	0,2426,17924,18156,25002,26730,28663,47185,51057,52297,69154,
#Partially deleted in new
chr3	183815875	183825578	chr3:183815875-183825578	3	-	183817355	183825547	789624	3	1561,118,432,	0,2118,9271,
#Partially deleted in new
chr3	183817061	183825594	chr3:183817061-183825594	1	-	183817355	183825547	789624	3	324,118,448,	0,932,8085,
#Partially deleted in new
chr3	183817376	183825521	chr3:183817376-183825521	0	-	183818082	183825521	789624	3	60,114,375,	0,617,7770,
#Partially deleted in new
chr3	183820162	183825225	chr3:183820162-183825225	0	-	183820162	183820162	8553170	2	281,79,	0,4984,
#Partially deleted in new
chr3	183829270	183884933	chr3:183829270-183884933	1	-	183829597	183844264	789624	11	439,98,102,71,150,96,120,49,141,196,51,	0,4221,4453,11299,13027,14960,27161,33482,37354,38594,55612,
#Partially deleted in new
chr3	183829384	183884907	chr3:183829384-183884907	3	-	183829597	183884846	789624	10	325,98,102,71,150,96,49,141,196,186,	0,4107,4339,11185,12913,14846,33368,37240,38480,55337,
#Partially deleted in new
chr3	183829384	183884907	chr3:183829384-183884907	0	-	183856528	183884846	789624	11	325,98,102,71,150,96,120,49,141,196,186,	0,4107,4339,11185,12913,14846,27047,33368,37240,38480,55337,
#Partially deleted in new
chr3	183829389	183884888	chr3:183829389-183884888	1	-	183829597	183884846	789624	9	320,98,102,71,96,49,141,196,167,	0,4102,4334,11180,14841,33363,37235,38475,55332,
#Partially deleted in new
chr3	183829389	183844274	chr3:183829389-183844274	0	-	183829597	183844274	789624	6	320,98,102,71,87,44,	0,4102,4334,11180,12908,14841,
#Partially deleted in new
chr3	183829389	183842354	chr3:183829389-183842354	0	-	183829597	183842354	789624	4	320,98,71,57,	0,4102,11180,12908,
#Partially deleted in new
chr3	183829389	183842394	chr3:183829389-183842394	0	-	183829685	183842394	789624	3	320,71,97,	0,11180,12908,
#Partially deleted in new
chr3	183829396	183884855	chr3:183829396-183884855	1	-	183829597	183884846	789624	8	313,98,71,96,49,141,196,134,	0,4095,11173,14834,33356,37228,38468,55325,
#Partially deleted in new
chr3	183829401	183884879	chr3:183829401-183884879	0	-	183862741	183884846	789624	11	308,98,102,71,150,96,120,105,141,196,158,	0,4090,4322,11168,12896,14829,27030,33295,37223,38463,55320,
#Partially deleted in new
chr3	183829508	183884908	chr3:183829508-183884908	0	-	183862741	183884846	789624	10	201,98,102,71,150,96,105,141,196,187,	0,3983,4215,11061,12789,14722,33188,37116,38356,55213,
#Partially deleted in new
chr3	183833767	183884727	chr3:183833767-183884727	0	-	183833767	183884727	789624	6	58,71,96,49,196,6,	0,6802,10463,28985,34097,50954,
#Partially deleted in new
chr3	183840569	183844774	chr3:183840569-183844774	0	-	183840569	183840569	8553170	3	71,150,544,	0,1728,3661,
#Partially deleted in new
chr3	183862606	183884933	chr3:183862606-183884933	0	-	183862606	183862606	8553170	4	195,141,196,47,	0,4018,5258,22280,
#Partially deleted in new
chr3	183884923	183887994	chr3:183884923-183887994	7	+	183884923	183884923	16724991	2	284,432,	0,2639,
#Deleted in new
chr3	183887554	183888449	chr3:183887554-183888449	5	+	183887554	183887554	16724991	1	895,	0,
#Partially deleted in new
chr3	183895899	183910936	chr3:183895899-183910936	7	-	183895899	183895899	16724991	9	218,142,185,142,174,161,150,113,171,	0,315,8295,9560,10134,10735,12239,13415,14866,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	183896048	183904298	chr3:183896048-183904298	4	-	183896048	183896048	16724991	5	69,142,315,60,104,	0,166,2072,3366,8146,
#Partially deleted in new
chr3	183919933	184018015	chr3:183919933-184018015	3	-	183921299	184014392	789624	30	1468,165,114,79,160,190,90,187,129,154,130,147,185,103,144,204,73,125,72,357,108,149,148,174,234,148,156,158,184,186,	0,5621,7396,8813,17967,22793,25916,27390,29819,30038,31507,31923,33152,39799,41577,43451,45251,45443,47761,51629,57583,58569,61793,62517,62840,67836,68638,69292,94330,97896,
#Partially deleted in new
chr3	183919937	184017939	chr3:183919937-184017939	1	-	183921299	184014392	789624	29	1464,165,114,79,160,190,90,187,154,130,147,185,103,144,204,73,125,72,357,108,149,148,174,234,148,156,158,184,110,	0,5617,7392,8809,17963,22789,25912,27386,30034,31503,31919,33148,39795,41573,43447,45247,45439,47757,51625,57579,58565,61789,62513,62836,67832,68634,69288,94326,97892,
#Partially deleted in new
chr3	183919938	184017836	chr3:183919938-184017836	0	-	183972016	184014392	789624	30	1463,165,114,79,160,190,90,187,129,154,130,147,185,103,144,204,73,125,72,472,108,149,148,174,234,148,156,158,184,7,	0,5616,7391,8808,17962,22788,25911,27385,29814,30033,31502,31918,33147,39794,41572,43446,45246,45438,47756,51624,57578,58564,61788,62512,62835,67831,68633,69287,94325,97891,
#Partially deleted in new
chr3	183925659	183942780	chr3:183925659-183942780	0	-	183937985	183942780	789624	6	60,114,79,160,83,54,	0,1670,3087,12241,16773,17067,
#Partially deleted in new
chr3	183967303	183971831	chr3:183967303-183971831	0	-	183967303	183967303	8553170	2	463,269,	0,4259,
#Partially deleted in new
chr3	183977517	183983576	chr3:183977517-183983576	0	-	183977517	183977517	8553170	6	107,149,148,174,234,142,	0,985,4209,4933,5256,5917,
#Partially deleted in new
chr3	183983752	184017889	chr3:183983752-184017889	1	-	183985342	184014392	789624	7	1142,75,148,156,158,184,60,	0,1551,4017,4819,5473,30511,34077,
#Partially deleted in new
chr3	183983752	184017889	chr3:183983752-184017889	1	-	183984807	184014392	789624	6	1142,148,156,158,184,60,	0,4017,4819,5473,30511,34077,
#Partially deleted in new
chr3	183983752	184017863	chr3:183983752-184017863	1	-	183987664	184014392	789624	5	4165,156,158,184,34,	0,4819,5473,30511,34077,
#Partially deleted in new
chr3	183983752	184017889	chr3:183983752-184017889	0	-	183985407	184014392	789624	7	1142,152,148,156,158,184,60,	0,1551,4017,4819,5473,30511,34077,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	183987770	184017916	chr3:183987770-184017916	0	-	184009944	184014392	789624	6	147,156,158,89,184,87,	0,801,1455,22118,26493,30059,
#Partially deleted in new
chr3	183988572	184017444	chr3:183988572-184017444	0	-	183988572	184014392	789624	4	155,158,184,94,	0,653,25691,28778,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	184000662	184017939	chr3:184000662-184017939	1	-	184001218	184014392	789624	3	589,184,110,	0,13601,17167,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	184006337	184011419	chr3:184006337-184011419	3	+	184006337	184006337	789624	3	124,191,154,	0,4113,4928,
#Deleted in new
chr3	184026368	184027756	chr3:184026368-184027756	7	-	184026368	184026368	16724991	1	1388,	0,
#Partially deleted in new
chr3	184031543	184039369	chr3:184031543-184039369	1	+	184036399	184038975	789624	6	28,166,172,253,216,624,	0,3513,4825,6477,6865,7202,
#Partially deleted in new
chr3	184031741	184038975	chr3:184031741-184038975	1	+	184031741	184038975	789624	8	66,45,86,170,149,253,216,230,	0,3436,4273,4633,5006,6279,6667,7004,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	184032830	184039284	chr3:184032830-184039284	3	+	184032830	184038975	789624	8	227,30,123,131,149,219,256,539,	0,2335,3147,3544,3917,5190,5538,5915,
#Partially deleted in new
chr3	184035103	184039200	chr3:184035103-184039200	1	+	184035219	184038975	789624	4	119,253,216,455,	0,2917,3305,3642,
#Partially deleted in new
chr3	184053046	184060671	chr3:184053046-184060671	3	+	184053080	184060352	789624	9	101,167,45,110,170,161,205,216,522,	0,1674,2265,3130,3828,5380,6389,6781,7103,
#Partially deleted in new
chr3	184076778	184084219	chr3:184076778-184084219	7	+	184076778	184076778	16724991	9	64,162,52,103,127,55,148,198,148,	0,1302,2232,3555,5898,6393,6639,6988,7293,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	184095117	184105178	chr3:184095117-184105178	3	-	184095117	184095117	789624	3	233,229,53,	0,9042,10008,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	184097063	184106995	chr3:184097063-184106995	1	+	184097529	184106693	789624	9	533,167,45,110,170,161,205,216,532,	0,3421,4421,7118,7723,8203,8701,9064,9400,
#Partially deleted in new
chr3	184097529	184106693	chr3:184097529-184106693	1	+	184097529	184106693	789624	8	67,167,110,170,161,205,216,230,	0,2955,6652,7257,7737,8235,8598,8934,
#Partially deleted in new
chr3	184100178	184106995	chr3:184100178-184106995	3	+	184100372	184106693	789624	8	473,45,110,170,161,205,216,532,	0,1306,4003,4608,5088,5586,5949,6285,
#Partially deleted in new
chr3	184100231	184105394	chr3:184100231-184105394	0	+	184100630	184105394	789624	6	85,167,45,110,170,128,	0,253,1253,3950,4555,5035,
#Partially deleted in new
chr3	184100372	184106693	chr3:184100372-184106693	1	+	184100372	184106693	789624	7	279,110,170,161,205,216,230,	0,3809,4414,4894,5392,5755,6091,
#Partially deleted in new
chr3	184100372	184106693	chr3:184100372-184106693	1	+	184100372	184106693	789624	7	279,188,170,161,205,216,230,	0,3809,4414,4894,5392,5755,6091,
#Partially deleted in new
chr3	184115351	184117898	chr3:184115351-184117898	7	+	184115351	184115351	16724991	2	150,2042,	0,505,
#Partially deleted in new
chr3	184132941	184133561	chr3:184132941-184133561	3	-	184132941	184132941	8553170	1	620,	0,
#Partially deleted in new
chr3	184134018	184135238	chr3:184134018-184135238	3	-	184134018	184134018	8553170	3	260,58,44,	0,517,1176,
#Partially deleted in new
chr3	184134018	184135181	chr3:184134018-184135181	0	-	184134018	184134018	8553170	3	260,58,24,	0,517,1139,
#Partially deleted in new
chr3	184135037	184145311	chr3:184135037-184145311	0	+	184135037	184135037	8553170	15	543,125,456,81,142,313,146,142,102,108,91,124,126,111,428,	0,1574,2582,3128,5042,5380,6887,7199,7464,7741,8014,8404,9061,9559,9846,
#Partially deleted in new
chr3	184135263	184145311	chr3:184135263-184145311	3	+	184135385	184144943	0	16	317,125,186,178,81,78,313,146,142,102,108,91,124,126,111,428,	0,1348,2356,2634,2902,4816,5154,6661,6973,7238,7515,7788,8178,8835,9333,9620,
#Partially deleted in new
chr3	184135336	184145263	chr3:184135336-184145263	0	+	184135336	184135336	8553170	15	244,125,186,178,81,78,313,146,158,102,108,91,783,111,380,	0,1275,2283,2561,2829,4743,5081,6588,6900,7165,7442,7715,8105,9260,9547,
#Partially deleted in new
chr3	184135354	184136979	chr3:184135354-184136979	0	+	184135385	184135727	8553170	2	562,368,	0,1257,
#Partially deleted in new
chr3	184135357	184145175	chr3:184135357-184145175	0	+	184135385	184140455	8553170	15	223,125,186,178,81,142,313,146,142,102,108,514,97,111,292,	0,1254,2262,2540,2808,4722,5060,6567,6879,7144,7421,7694,8770,9239,9526,
#Partially deleted in new
chr3	184135362	184145305	chr3:184135362-184145305	0	+	184135362	184135362	8553170	15	218,125,186,178,81,78,313,146,142,102,108,514,126,111,422,	0,1249,2257,2535,2803,4717,5055,6562,6874,7139,7416,7689,8736,9234,9521,
#Partially deleted in new
chr3	184135364	184136980	chr3:184135364-184136980	1	+	184135385	184136740	789624	2	216,369,	0,1247,
#Partially deleted in new
chr3	184135365	184145295	chr3:184135365-184145295	0	+	184135385	184141919	8553170	16	215,125,186,178,81,78,313,204,142,102,108,91,124,126,111,412,	0,1246,2254,2532,2800,4714,5052,6501,6871,7136,7413,7686,8076,8733,9231,9518,
#Partially deleted in new
chr3	184135374	184145302	chr3:184135374-184145302	0	+	184135385	184142809	8553170	16	206,125,186,178,81,78,313,146,158,102,108,91,124,126,111,419,	0,1237,2245,2523,2791,4705,5043,6550,6862,7127,7404,7677,8067,8724,9222,9509,
#Partially deleted in new
chr3	184135375	184145123	chr3:184135375-184145123	0	+	184135385	184141928	8553170	15	205,125,186,178,81,78,323,146,142,102,108,514,126,111,240,	0,1236,2244,2522,2790,4704,5042,6549,6861,7126,7403,7676,8723,9221,9508,
#Partially deleted in new
chr3	184135376	184144966	chr3:184135376-184144966	1	+	184135385	184144943	8553170	16	204,125,186,202,81,78,313,146,142,102,108,91,124,126,111,83,	0,1235,2243,2497,2789,4703,5041,6548,6860,7125,7402,7675,8065,8722,9220,9507,
#Partially deleted in new
chr3	184135381	184145311	chr3:184135381-184145311	1	+	184135385	184144943	8553170	16	199,125,186,178,81,78,313,146,142,102,108,91,124,126,111,428,	0,1230,2238,2516,2784,4698,5036,6543,6855,7120,7397,7670,8060,8717,9215,9502,
#Partially deleted in new
chr3	184135384	184145113	chr3:184135384-184145113	0	+	184135385	184135727	8553170	16	364,125,186,178,81,78,313,146,142,102,108,91,124,126,111,230,	0,1227,2235,2513,2781,4695,5033,6540,6852,7117,7394,7667,8057,8714,9212,9499,
#Partially deleted in new
chr3	184135388	184145292	chr3:184135388-184145292	0	+	184135388	184135388	8553170	12	192,125,186,178,81,661,146,142,102,108,1173,696,	0,1223,2231,2509,2777,4691,6536,6848,7113,7390,7663,9208,
#Partially deleted in new
chr3	184135391	184145273	chr3:184135391-184145273	0	+	184135391	184142038	8553170	15	189,125,186,178,81,78,198,146,142,102,108,514,126,111,390,	0,1220,2228,2506,2774,4688,5026,6533,6845,7110,7387,7660,8707,9205,9492,
#Partially deleted in new
chr3	184135399	184142886	chr3:184135399-184142886	0	+	184135399	184142268	789624	5	181,64,142,102,108,	0,1212,6837,7102,7379,
#Partially deleted in new
chr3	184135402	184146112	chr3:184135402-184146112	0	+	184135402	184135402	8553170	13	178,125,186,178,81,651,146,142,102,108,1173,111,1229,	0,1209,2217,2495,2763,4677,6522,6834,7099,7376,7649,9194,9481,
#Partially deleted in new
chr3	184135436	184145288	chr3:184135436-184145288	0	+	184135436	184140146	8553170	16	144,125,186,178,81,101,313,146,142,102,108,91,124,126,111,405,	0,1175,2183,2461,2729,4620,4981,6488,6800,7065,7342,7615,8005,8662,9160,9447,
#Partially deleted in new
chr3	184135493	184137942	chr3:184135493-184137942	0	+	184135493	184135702	8553170	5	87,253,125,186,45,	0,170,1118,2126,2404,
#Partially deleted in new
chr3	184135518	184145288	chr3:184135518-184145288	0	+	184135518	184143458	8553170	16	62,125,186,178,81,78,313,146,142,102,108,91,135,126,111,405,	0,1093,2101,2379,2647,4561,4899,6406,6718,6983,7260,7533,7912,8580,9078,9365,
#Partially deleted in new
chr3	184135520	184145311	chr3:184135520-184145311	0	+	184135520	184135520	8553170	15	60,1194,178,81,78,313,146,158,102,108,91,124,126,111,428,	0,1091,2377,2645,4559,4897,6404,6716,6981,7258,7531,7921,8578,9076,9363,
#Partially deleted in new
chr3	184135900	184138033	chr3:184135900-184138033	0	+	184135900	184135900	8553170	5	51,125,99,186,136,	0,711,1531,1719,1997,
#Partially deleted in new
chr3	184136648	184145292	chr3:184136648-184145292	0	+	184136648	184141928	8553170	15	88,186,178,81,78,313,150,142,102,108,91,124,146,111,409,	0,971,1249,1517,3431,3769,5272,5588,5853,6130,6403,6793,7430,7948,8235,
#Partially deleted in new
chr3	184136666	184145288	chr3:184136666-184145288	0	+	184136666	184140455	8553170	15	70,186,178,81,142,313,150,158,102,108,91,124,126,111,405,	0,953,1231,1499,3413,3751,5254,5570,5835,6112,6385,6775,7432,7930,8217,
#Partially deleted in new
chr3	184136678	184145304	chr3:184136678-184145304	0	+	184136678	184136678	8553170	9	1127,178,81,146,142,102,108,1656,421,	0,1219,1487,5246,5558,5823,6100,6373,8205,
#Partially deleted in new
chr3	184136682	184145282	chr3:184136682-184145282	0	+	184136682	184142038	8553170	13	54,186,178,81,78,146,81,102,108,514,126,111,399,	0,937,1215,1483,3397,5242,5615,5819,6096,6369,7416,7914,8201,
#Partially deleted in new
chr3	184136684	184145277	chr3:184136684-184145277	0	+	184136684	184138152	8553170	15	52,186,178,103,78,313,146,142,102,108,91,124,126,111,394,	0,935,1213,1459,3395,3733,5240,5552,5817,6094,6367,6757,7414,7912,8199,
#Partially deleted in new
chr3	184140148	184140908	chr3:184140148-184140908	0	+	184140148	184140148	8553170	2	73,491,	0,269,
#Deleted in new
chr3	184142107	184142871	chr3:184142107-184142871	0	+	184142107	184142107	8553170	3	271,102,93,	0,394,671,
#Partially deleted in new
chr3	184149703	184150435	chr3:184149703-184150435	7	+	184149703	184149703	16724991	1	732,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	184155310	184173614	chr3:184155310-184173614	3	+	184155635	184170755	8553170	15	486,70,122,110,136,94,70,140,77,68,150,132,168,216,3296,	0,8346,8956,9181,9485,9802,10111,10815,11135,11295,11515,12269,12587,14695,15008,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	184155401	184173611	chr3:184155401-184173611	1	+	184155635	184170755	789624	15	395,70,122,110,136,94,70,140,77,68,150,132,168,216,3293,	0,8255,8865,9090,9394,9711,10020,10724,11044,11204,11424,12178,12496,14604,14917,
#Partially deleted in new
chr3	184155558	184164517	chr3:184155558-184164517	0	+	184155635	184156432	789624	5	238,88,70,122,40,	0,801,8098,8708,8919,
#Partially deleted in new
chr3	184155561	184164912	chr3:184155561-184164912	0	+	184155561	184155561	8553170	5	235,70,122,124,117,	0,8095,8705,8916,9234,
#Partially deleted in new
chr3	184155564	184170873	chr3:184155564-184170873	1	+	184155635	184170755	789624	15	232,70,122,110,136,94,70,140,77,68,99,132,168,216,555,	0,8092,8702,8927,9231,9548,9857,10561,10881,11041,11312,12015,12333,14441,14754,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	184155568	184164332	chr3:184155568-184164332	0	+	184155635	184162743	8553170	4	228,197,70,66,	0,7036,8088,8698,
#Partially deleted in new
chr3	184156774	184166509	chr3:184156774-184166509	0	+	184156774	184156774	8553170	9	293,70,122,110,136,94,70,140,64,	0,6882,7492,7717,8021,8338,8647,9351,9671,
#Partially deleted in new
chr3	184163676	184170876	chr3:184163676-184170876	0	+	184163676	184163676	8553170	13	50,122,110,411,70,140,77,68,150,132,168,216,558,	0,590,815,1119,1745,2449,2769,2929,3149,3903,4221,6329,6642,
#Deleted in new
chr3	184164646	184165478	chr3:184164646-184165478	0	+	184164646	184164646	8553170	2	560,57,	0,775,
#Deleted in new
chr3	184164855	184168012	chr3:184164855-184168012	0	+	184164855	184164855	8553170	8	76,94,70,140,228,150,132,115,	0,257,566,1270,1590,1970,2724,3042,
#Partially deleted in new
chr3	184164929	184170364	chr3:184164929-184170364	0	+	184164929	184166847	8553170	10	2,94,70,140,68,150,132,168,216,46,	0,183,492,1196,1676,1896,2650,2968,5076,5389,
#Deleted in new
chr3	184166193	184166701	chr3:184166193-184166701	0	+	184166193	184166193	8553170	2	72,256,	0,252,
#Partially deleted in new
chr3	184174688	184184091	chr3:184174688-184184091	1	+	184176993	184183616	0	11	271,117,266,83,136,142,120,136,98,112,610,	0,2262,4168,5480,6160,6396,7007,7223,7462,8068,8793,
#Deleted in new
chr3	184174845	184177869	chr3:184174845-184177869	0	+	184174845	184174845	8553170	3	114,117,327,	0,2105,2697,
#Partially deleted in new
chr3	184174854	184184091	chr3:184174854-184184091	3	+	184176993	184183616	0	12	105,117,266,83,6,136,142,120,136,98,112,610,	0,2096,4002,5314,5790,5994,6230,6841,7057,7296,7902,8627,
#Partially deleted in new
chr3	184174854	184183662	chr3:184174854-184183662	1	+	184176993	184183616	789624	14	105,117,69,6,266,83,6,136,142,120,136,98,112,181,	0,2096,2688,3363,4002,5314,5790,5994,6230,6841,7057,7296,7902,8627,
#Deleted in new
chr3	184174854	184179122	chr3:184174854-184179122	0	+	184176993	184179122	789624	4	105,117,69,266,	0,2096,2688,4002,
#Partially deleted in new
chr3	184174854	184180476	chr3:184174854-184180476	0	+	184174854	184174854	8553170	4	105,117,266,308,	0,2096,4002,5314,
#Partially deleted in new
chr3	184174881	184180893	chr3:184174881-184180893	0	+	184176993	184180893	789624	7	78,117,6,266,83,6,45,	0,2069,3336,3975,5287,5763,5967,
#Deleted in new
chr3	184174885	184179349	chr3:184174885-184179349	0	+	184174885	184174885	8553170	3	74,117,493,	0,2065,3971,
#Partially deleted in new
chr3	184174904	184180212	chr3:184174904-184180212	0	+	184174904	184174904	8553170	4	55,117,335,44,	0,2046,3952,5264,
#Deleted in new
chr3	184174948	184179122	chr3:184174948-184179122	0	+	184176993	184179122	789624	3	162,117,266,	0,2002,3908,
#Partially deleted in new
chr3	184176777	184184048	chr3:184176777-184184048	1	+	184176993	184183616	0	10	290,266,83,136,142,120,136,98,112,567,	0,2079,3391,4071,4307,4918,5134,5373,5979,6704,
#Partially deleted in new
chr3	184176948	184182054	chr3:184176948-184182054	0	+	184176993	184182054	789624	8	119,266,83,6,33,32,120,143,	0,1908,3220,3696,3900,4246,4747,4963,
#Partially deleted in new
chr3	184176950	184181286	chr3:184176950-184181286	0	+	184176950	184176950	8553170	5	117,266,83,6,438,	0,1906,3218,3694,3898,
#Partially deleted in new
chr3	184176978	184180915	chr3:184176978-184180915	0	+	184176993	184180915	789624	5	89,266,83,97,67,	0,1878,3190,3666,3870,
#Partially deleted in new
chr3	184176993	184183616	chr3:184176993-184183616	1	+	184176993	184183616	789624	11	74,266,83,3,136,142,120,136,98,112,135,	0,1863,3175,3848,3855,4091,4702,4918,5157,5763,6488,
#Deleted in new
chr3	184180063	184181793	chr3:184180063-184181793	0	+	184180063	184180063	8553170	5	188,6,136,142,98,	0,581,785,1021,1632,
#Deleted in new
chr3	184180215	184181685	chr3:184180215-184181685	0	+	184180215	184180215	8553170	3	435,136,601,	0,633,869,
#Partially deleted in new
chr3	184180508	184184065	chr3:184180508-184184065	0	+	184180508	184180508	8553170	8	142,136,142,120,136,98,112,584,	0,340,576,1187,1403,1642,2248,2973,
#Deleted in new
chr3	184181194	184182080	chr3:184181194-184182080	0	+	184181194	184181194	8553170	3	32,120,169,	0,501,717,
#Deleted in new
chr3	184181402	184182181	chr3:184181402-184182181	0	+	184181402	184181402	8553170	3	413,136,31,	0,509,748,
#Deleted in new
chr3	184181618	184182303	chr3:184181618-184182303	0	+	184181618	184181618	8553170	2	429,153,	0,532,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	184182014	184183298	chr3:184182014-184183298	0	+	184182014	184182994	789624	3	33,98,542,	0,136,742,
#Partially deleted in new
chr3	184186022	184194007	chr3:184186022-184194007	3	+	184186207	184193698	789624	21	258,148,80,47,98,123,267,81,60,57,23,56,201,77,45,133,89,92,133,88,468,	0,484,773,1374,1641,1838,2118,2738,2906,3065,3232,3365,3534,3832,4976,5100,6578,6782,7079,7342,7517,
#Deleted in new
chr3	184186094	184187958	chr3:184186094-184187958	0	+	184186207	184187374	789624	6	186,148,80,80,98,98,	0,412,701,1269,1569,1766,
#Deleted in new
chr3	184186103	184187283	chr3:184186103-184187283	0	+	184186103	184186103	8553170	3	177,148,488,	0,403,692,
#Deleted in new
chr3	184186159	184187046	chr3:184186159-184187046	0	+	184186159	184186159	8553170	2	121,540,	0,347,
#Deleted in new
chr3	184186160	184187901	chr3:184186160-184187901	0	+	184186160	184186160	8553170	5	120,148,80,365,41,	0,346,635,1236,1700,
#Partially deleted in new
chr3	184186173	184194005	chr3:184186173-184194005	1	+	184186207	184193698	789624	21	107,130,80,47,98,123,267,81,60,57,23,56,201,77,45,133,89,92,133,88,466,	0,333,622,1223,1490,1687,1967,2587,2755,2914,3081,3214,3383,3681,4825,4949,6427,6631,6928,7191,7366,
#Partially deleted in new
chr3	184186175	184194012	chr3:184186175-184194012	0	+	184186175	184186175	8553170	20	105,369,365,123,267,7,81,60,57,23,56,201,77,45,133,89,92,133,88,473,	0,331,1221,1685,1965,2488,2585,2753,2912,3079,3212,3381,3679,4823,4947,6425,6629,6926,7189,7364,
#Deleted in new
chr3	184186190	184187613	chr3:184186190-184187613	0	+	184186190	184186190	8553170	4	90,148,80,250,	0,316,605,1173,
#Deleted in new
chr3	184186195	184188827	chr3:184186195-184188827	0	+	184186195	184186195	8553170	7	85,148,80,47,320,267,67,	0,311,600,1201,1468,1945,2565,
#Deleted in new
chr3	184186198	184187658	chr3:184186198-184187658	0	+	184186198	184186198	8553170	4	82,130,80,262,	0,308,597,1198,
#Deleted in new
chr3	184188313	184189725	chr3:184188313-184189725	0	+	184188313	184188313	8553170	6	94,81,60,190,56,169,	0,447,615,774,1074,1243,
#Deleted in new
chr3	184188333	184189959	chr3:184188333-184189959	0	+	184188333	184188333	8553170	8	74,81,60,57,23,56,201,105,	0,427,595,754,921,1054,1223,1521,
#Deleted in new
chr3	184188789	184189701	chr3:184188789-184189701	0	+	184188789	184188789	8553170	5	52,60,57,189,145,	0,139,298,465,767,
#Deleted in new
chr3	184188808	184189880	chr3:184188808-184189880	0	+	184188808	184188808	8553170	6	33,60,57,23,370,26,	0,120,279,446,579,1046,
#Partially deleted in new
chr3	184189632	184194002	chr3:184189632-184194002	0	+	184189632	184189632	8553170	8	125,77,45,133,296,133,88,463,	0,222,1366,1490,2968,3469,3732,3907,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	184189829	184194006	chr3:184189829-184194006	0	+	184189829	184189829	8553170	6	1214,133,296,133,88,467,	0,1293,2771,3272,3535,3710,
#Partially deleted in new
chr3	184190863	184194006	chr3:184190863-184194006	0	+	184190863	184190863	8553170	7	180,133,89,92,133,88,467,	0,259,1737,1941,2238,2501,2676,
#Deleted in new
chr3	184193149	184193769	chr3:184193149-184193769	0	+	184193149	184193149	8553170	2	303,230,	0,390,
#Deleted in new
chr3	184230428	184242329	chr3:184230428-184242329	3	+	184230528	184242038	789624	19	239,171,220,158,132,125,156,111,209,112,186,172,311,190,348,138,84,218,840,	0,318,2749,3147,3837,4202,4724,5723,5914,6209,6797,7874,8134,8965,9260,10362,10595,10758,11061,
#Deleted in new
chr3	184232599	184234997	chr3:184232599-184234997	0	+	184232599	184232599	8553170	3	1134,132,367,	0,1666,2031,
#Deleted in new
chr3	184233415	184242283	chr3:184233415-184242283	1	+	184233702	184242038	789624	17	39,158,132,125,156,111,209,112,186,172,314,190,348,138,84,218,794,	0,160,850,1215,1737,2736,2927,3222,3810,4887,5144,5978,6273,7375,7608,7771,8074,
#Deleted in new
chr3	184234519	184242329	chr3:184234519-184242329	0	+	184234519	184234519	8553170	14	236,156,111,209,112,186,172,311,190,348,138,84,218,840,	0,633,1632,1823,2118,2706,3783,4043,4874,5169,6271,6504,6667,6970,
#Deleted in new
chr3	184235018	184236646	chr3:184235018-184236646	0	+	184235018	184235018	8553170	4	290,111,209,9,	0,1133,1324,1619,
#Deleted in new
chr3	184240426	184241404	chr3:184240426-184241404	0	+	184240426	184240426	8553170	3	502,84,218,	0,597,760,
#Deleted in new
chr3	184241404	184241489	chr3:184241404-184241489	3	+	184241404	184241404	5263520	1	85,	0,
#Partially deleted in new
chr3	184242300	184248962	chr3:184242300-184248962	0	-	184245487	184248940	789624	8	376,145,77,206,121,161,148,218,	0,512,1253,1490,2300,2897,3167,6444,
#Partially deleted in new
chr3	184242333	184248971	chr3:184242333-184248971	3	-	184242513	184248940	789624	9	343,145,77,206,121,161,148,100,227,	0,479,1220,1457,2267,2864,3134,3379,6411,
#Partially deleted in new
chr3	184242424	184249548	chr3:184242424-184249548	1	-	184242513	184249277	789624	9	252,145,77,206,121,161,148,100,323,	0,388,1129,1366,2176,2773,3043,3288,6801,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	184242458	184243589	chr3:184242458-184243589	0	-	184242458	184242458	8553170	2	218,777,	0,354,
#Partially deleted in new
chr3	184242468	184249520	chr3:184242468-184249520	1	-	184242513	184249065	789624	9	208,145,77,206,121,161,148,100,531,	0,344,1085,1322,2132,2729,2999,3244,6521,
#Partially deleted in new
chr3	184242573	184248935	chr3:184242573-184248935	0	-	184242573	184248935	789624	7	103,145,77,206,121,161,154,	0,239,980,1217,2027,2624,6208,
#Partially deleted in new
chr3	184242884	184248933	chr3:184242884-184248933	0	-	184245487	184248933	789624	6	73,77,206,121,148,189,	0,669,906,1716,2583,5860,
#Partially deleted in new
chr3	184242960	184243996	chr3:184242960-184243996	0	-	184242960	184242960	8553170	3	42,99,206,	0,571,830,
#Partially deleted in new
chr3	184243553	184245021	chr3:184243553-184245021	0	-	184243553	184243553	8553170	3	77,206,421,	0,237,1047,
#Partially deleted in new
chr3	184243790	184248949	chr3:184243790-184248949	0	-	184245773	184248940	789624	6	206,121,161,148,100,168,	0,810,1407,1677,1922,4991,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	184244328	184245342	chr3:184244328-184245342	0	-	184244328	184244328	8553170	2	393,145,	0,869,
#Partially deleted in new
chr3	184244758	184248950	chr3:184244758-184248950	0	-	184244758	184244758	8553170	4	600,148,100,169,	0,709,954,4023,
#Partially deleted in new
chr3	184244777	184248962	chr3:184244777-184248962	0	-	184244777	184244777	8553170	3	581,148,181,	0,690,4004,
#Partially deleted in new
chr3	184245066	184248929	chr3:184245066-184248929	0	-	184245066	184245066	8553170	4	292,148,100,185,	0,401,646,3678,
#Partially deleted in new
chr3	184249649	184259585	chr3:184249649-184259585	3	+	184249694	184258575	0	3	241,284,1298,	0,7823,8638,
#Partially deleted in new
chr3	184249694	184293031	chr3:184249694-184293031	3	+	184249694	184292238	789624	19	196,284,136,216,125,147,66,189,143,115,111,99,78,104,111,68,191,96,970,	0,7778,27197,27556,28230,28472,28797,34090,35268,35783,38142,39742,39946,40560,40862,41098,41345,41649,42367,
#Deleted in new
chr3	184259212	184261463	chr3:184259212-184261463	3	-	184260156	184261285	789624	2	1015,347,	0,1904,
#Partially deleted in new
chr3	184276010	184293031	chr3:184276010-184293031	3	+	184276153	184292238	789624	18	182,136,216,125,147,66,189,143,115,111,99,78,104,111,68,191,96,970,	0,881,1240,1914,2156,2481,7774,8952,9467,11826,13426,13630,14244,14546,14782,15029,15333,16051,
#Partially deleted in new
chr3	184276015	184293031	chr3:184276015-184293031	1	+	184276153	184292238	789624	19	177,87,136,216,125,147,66,189,143,115,111,99,78,104,111,68,191,96,970,	0,465,876,1235,1909,2151,2476,7769,8947,9462,11821,13421,13625,14239,14541,14777,15024,15328,16046,
#Partially deleted in new
chr3	184276027	184292065	chr3:184276027-184292065	0	+	184276027	184276027	8553170	17	165,136,216,125,147,66,189,143,115,111,99,78,104,111,68,400,4,	0,864,1223,1897,2139,2464,7757,8935,9450,11809,13409,13613,14227,14529,14765,15012,16034,
#Partially deleted in new
chr3	184276034	184292350	chr3:184276034-184292350	1	+	184276153	184292238	789624	19	158,225,136,216,125,147,66,189,143,115,111,99,78,104,111,68,191,96,289,	0,446,857,1216,1890,2132,2457,7750,8928,9443,11802,13402,13606,14220,14522,14758,15005,15309,16027,
#Deleted in new
chr3	184276153	184278173	chr3:184276153-184278173	0	+	184276153	184277214	789624	5	39,136,281,125,7,	0,738,1032,1771,2013,
#Deleted in new
chr3	184276159	184277343	chr3:184276159-184277343	0	+	184276159	184276159	8553170	3	33,87,452,	0,321,732,
#Partially deleted in new
chr3	184276603	184291930	chr3:184276603-184291930	0	+	184276603	184291493	789624	17	102,136,216,125,147,66,189,143,115,111,99,78,104,111,68,191,587,	0,288,647,1321,1563,1888,7181,8359,8874,11233,12833,13037,13651,13953,14189,14436,14740,
#Partially deleted in new
chr3	184276929	184291217	chr3:184276929-184291217	0	+	184276929	184276929	8553170	13	98,216,125,147,189,143,115,111,99,78,104,111,425,	0,321,995,1237,6855,8033,8548,10907,12507,12711,13325,13627,13863,
#Deleted in new
chr3	184278214	184278908	chr3:184278214-184278908	0	+	184278214	184278214	8553170	2	99,417,	0,277,
#Partially deleted in new
chr3	184298708	184309054	chr3:184298708-184309054	3	+	184299266	184308890	0	21	693,57,165,122,225,159,145,61,147,107,128,88,163,102,146,84,169,95,127,119,347,	0,1142,1571,2828,3138,3661,3970,4293,4611,4934,5238,5595,7059,7345,7641,8042,8648,8905,9181,9740,9999,
#Partially deleted in new
chr3	184299197	184302692	chr3:184299197-184302692	0	+	184299266	184302692	789624	6	204,57,165,122,159,14,	0,653,1082,2339,3172,3481,
#Partially deleted in new
chr3	184299234	184301935	chr3:184299234-184301935	0	+	184299234	184299234	8553170	5	167,57,165,122,165,	0,616,1045,2302,2536,
#Partially deleted in new
chr3	184299238	184302061	chr3:184299238-184302061	0	+	184299238	184299238	8553170	4	163,57,165,525,	0,612,1041,2298,
#Deleted in new
chr3	184299250	184300652	chr3:184299250-184300652	0	+	184299250	184299250	8553170	3	151,57,373,	0,600,1029,
#Partially deleted in new
chr3	184299253	184302064	chr3:184299253-184302064	0	+	184299266	184299446	789624	5	380,57,165,122,218,	0,597,1026,2283,2593,
#Deleted in new
chr3	184299256	184300444	chr3:184299256-184300444	0	+	184299256	184299256	8553170	2	651,165,	0,1023,
#Partially deleted in new
chr3	184299903	184302775	chr3:184299903-184302775	0	+	184299903	184301932	789624	6	4,165,122,278,159,97,	0,376,1633,1890,2466,2775,
#Partially deleted in new
chr3	184300580	184309000	chr3:184300580-184309000	1	+	184301645	184308890	0	19	105,122,214,159,145,61,147,107,128,88,163,102,146,84,169,95,127,119,293,	0,956,1277,1789,2098,2421,2739,3062,3366,3723,5187,5473,5769,6170,6776,7033,7309,7868,8127,
#Partially deleted in new
chr3	184300580	184309048	chr3:184300580-184309048	1	+	184301569	184308890	0	19	105,122,225,159,145,61,147,107,128,88,163,102,146,84,169,95,127,119,341,	0,956,1266,1789,2098,2421,2739,3062,3366,3723,5187,5473,5769,6170,6776,7033,7309,7868,8127,
#Partially deleted in new
chr3	184300585	184302422	chr3:184300585-184302422	0	+	184300585	184300585	8553170	4	100,122,301,53,	0,951,1185,1784,
#Deleted in new
chr3	184301721	184302772	chr3:184301721-184302772	0	+	184301721	184301721	8553170	3	350,159,94,	0,648,957,
#Deleted in new
chr3	184302029	184303685	chr3:184302029-184303685	0	+	184302029	184302029	8553170	5	499,145,61,147,43,	0,649,972,1290,1613,
#Deleted in new
chr3	184302739	184303915	chr3:184302739-184303915	0	+	184302739	184302739	8553170	4	84,61,147,273,	0,262,580,903,
#Deleted in new
chr3	184303027	184304011	chr3:184303027-184304011	0	+	184303027	184303027	8553170	3	35,430,65,	0,292,919,
#Partially deleted in new
chr3	184304061	184306103	chr3:184304061-184306103	0	+	184304061	184304061	8553170	3	330,163,50,	0,1706,1992,
#Partially deleted in new
chr3	184305846	184307902	chr3:184305846-184307902	0	+	184305846	184307902	789624	6	84,102,146,169,95,13,	0,207,503,1510,1767,2043,
#Partially deleted in new
chr3	184305860	184307677	chr3:184305860-184307677	0	+	184305860	184305860	8553170	5	70,102,146,84,321,	0,193,489,890,1496,
#Partially deleted in new
chr3	184306610	184308534	chr3:184306610-184308534	0	+	184306610	184306610	8553170	6	29,84,169,95,127,86,	0,140,746,1003,1279,1838,
#Deleted in new
chr3	184307921	184308724	chr3:184307921-184308724	0	+	184307921	184307921	8553170	2	95,276,	0,527,
#Partially deleted in new
chr3	184314494	184335353	chr3:184314494-184335353	3	+	184315796	184334908	0	33	180,57,94,87,177,100,113,93,67,822,89,187,134,159,186,198,147,237,105,160,101,103,103,233,119,173,126,82,99,135,82,141,627,	0,994,1268,1637,2826,3222,5194,6135,6432,6787,7867,8049,8326,8588,8913,9285,9706,10383,10774,10985,11356,12032,12386,12721,13091,13335,14136,14414,16771,16977,17233,17451,20232,
#Partially deleted in new
chr3	184314494	184335357	chr3:184314494-184335357	1	+	184315796	184334908	0	33	180,94,87,21,177,100,113,93,67,822,89,187,134,159,186,198,147,237,105,160,101,103,103,233,119,173,126,82,99,135,82,141,631,	0,1268,1637,2218,2826,3222,5194,6135,6432,6787,7867,8049,8326,8588,8913,9285,9706,10383,10774,10985,11356,12032,12386,12721,13091,13335,14136,14414,16771,16977,17233,17451,20232,
#Partially deleted in new
chr3	184314501	184335353	chr3:184314501-184335353	1	+	184316191	184334908	0	33	173,57,94,147,177,100,113,93,67,822,89,187,134,159,186,198,147,237,105,160,101,103,103,233,119,173,126,82,99,135,82,141,627,	0,987,1261,1570,2819,3215,5187,6128,6425,6780,7860,8042,8319,8581,8906,9278,9699,10376,10767,10978,11349,12025,12379,12714,13084,13328,14129,14407,16764,16970,17226,17444,20225,
#Partially deleted in new
chr3	184314541	184335351	chr3:184314541-184335351	1	+	184317434	184334908	0	30	133,177,100,113,93,67,822,89,187,134,159,186,198,147,237,105,160,101,103,103,233,119,173,126,82,99,135,82,141,625,	0,2779,3175,5147,6088,6385,6740,7820,8002,8279,8541,8866,9238,9659,10336,10727,10938,11309,11985,12339,12674,13044,13288,14089,14367,16724,16930,17186,17404,20185,
#Partially deleted in new
chr3	184314549	184321554	chr3:184314549-184321554	0	+	184320680	184321554	789624	4	125,93,67,273,	0,6080,6377,6732,
#Partially deleted in new
chr3	184314550	184335353	chr3:184314550-184335353	0	+	184319756	184320857	789624	29	124,100,113,93,151,822,89,187,134,159,186,198,147,237,105,160,101,103,103,233,119,173,126,82,99,135,82,141,627,	0,3166,5138,6079,6292,6731,7811,7993,8270,8532,8857,9229,9650,10327,10718,10929,11300,11976,12330,12665,13035,13279,14080,14358,16715,16921,17177,17395,20176,
#Partially deleted in new
chr3	184314551	184324226	chr3:184314551-184324226	0	+	184315796	184324226	789624	16	123,94,87,177,100,113,93,67,822,89,187,134,159,189,198,26,	0,1211,1580,2769,3165,5137,6078,6375,6730,7810,7992,8269,8531,8853,9228,9649,
#Partially deleted in new
chr3	184314561	184324312	chr3:184314561-184324312	0	+	184315796	184324312	789624	17	113,94,87,21,177,100,113,93,67,822,89,187,134,159,189,198,112,	0,1201,1570,2151,2759,3155,5127,6068,6365,6720,7800,7982,8259,8521,8843,9218,9639,
#Partially deleted in new
chr3	184314566	184335017	chr3:184314566-184335017	1	+	184315796	184334908	0	34	108,57,94,87,21,177,100,113,93,67,822,89,187,134,159,186,198,147,237,105,160,101,103,103,233,119,173,126,82,99,135,82,141,291,	0,922,1196,1565,2146,2754,3150,5122,6063,6360,6715,7795,7977,8254,8516,8841,9213,9634,10311,10702,10913,11284,11960,12314,12649,13019,13263,14064,14342,16699,16905,17161,17379,20160,
#Partially deleted in new
chr3	184314567	184325299	chr3:184314567-184325299	0	+	184315796	184319757	789624	17	107,57,94,87,113,93,67,822,89,187,134,159,186,198,147,237,31,	0,921,1195,1564,5121,6062,6359,6714,7794,7976,8253,8515,8840,9212,9633,10310,10701,
#Partially deleted in new
chr3	184314568	184325299	chr3:184314568-184325299	0	+	184315796	184325299	789624	18	106,57,94,87,100,113,93,67,822,89,187,134,159,186,198,147,237,31,	0,920,1194,1563,3148,5120,6061,6358,6713,7793,7975,8252,8514,8839,9211,9632,10309,10700,
#Partially deleted in new
chr3	184314605	184335353	chr3:184314605-184335353	1	+	184319756	184334908	0	29	69,100,113,93,67,822,89,187,134,159,186,198,147,237,105,160,101,103,103,233,119,173,126,82,99,135,82,141,627,	0,3111,5083,6024,6321,6676,7756,7938,8215,8477,8802,9174,9595,10272,10663,10874,11245,11921,12275,12610,12980,13224,14025,14303,16660,16866,17122,17340,20121,
#Deleted in new
chr3	184314607	184317773	chr3:184314607-184317773	0	+	184316191	184317773	789624	5	67,94,147,177,57,	0,1155,1464,2713,3109,
#Deleted in new
chr3	184314612	184316117	chr3:184314612-184316117	0	+	184314612	184314612	8553170	3	62,57,355,	0,876,1150,
#Partially deleted in new
chr3	184314618	184319728	chr3:184314618-184319728	0	+	184315796	184319728	789624	7	56,57,94,87,177,67,40,	0,870,1144,1513,2702,3131,5070,
#Partially deleted in new
chr3	184314653	184319801	chr3:184314653-184319801	0	+	184317434	184319801	789624	8	21,57,94,147,21,177,100,113,	0,835,1109,1418,2059,2667,3063,5035,
#Partially deleted in new
chr3	184315163	184334908	chr3:184315163-184334908	1	+	184317434	184334908	789624	30	382,177,100,113,93,67,822,89,187,134,159,189,198,147,237,105,160,101,103,103,233,119,173,126,82,99,135,82,141,182,	0,2157,2553,4525,5466,5763,6118,7198,7380,7657,7919,8241,8616,9037,9714,10105,10316,10687,11363,11717,12052,12422,12666,13467,13745,16102,16308,16564,16782,19563,
#Partially deleted in new
chr3	184315165	184335358	chr3:184315165-184335358	1	+	184315796	184334908	0	32	380,94,87,177,100,113,93,67,822,89,187,134,159,189,198,147,237,105,160,101,103,103,233,119,173,126,82,99,135,82,141,632,	0,597,966,2155,2551,4523,5464,5761,6116,7196,7378,7655,7917,8239,8614,9035,9712,10103,10314,10685,11361,11715,12050,12420,12664,13465,13743,16100,16306,16562,16780,19561,
#Partially deleted in new
chr3	184315407	184335351	chr3:184315407-184335351	1	+	184315796	184334908	0	32	449,87,21,177,100,113,93,67,822,89,187,134,159,186,198,147,237,105,160,101,103,103,233,119,173,126,82,99,135,82,141,625,	0,724,1305,1913,2309,4281,5222,5519,5874,6954,7136,7413,7675,8000,8372,8793,9470,9861,10072,10443,11119,11473,11808,12178,12422,13223,13501,15858,16064,16320,16538,19319,
#Partially deleted in new
chr3	184315762	184320722	chr3:184315762-184320722	0	+	184316191	184320722	789624	6	94,147,177,70,113,93,	0,309,1558,1984,3926,4867,
#Partially deleted in new
chr3	184316191	184334908	chr3:184316191-184334908	1	+	184316191	184334908	789624	30	27,177,100,113,93,67,822,89,187,134,159,189,198,147,237,105,160,101,103,103,233,119,173,126,82,99,135,82,141,182,	0,1129,1525,3497,4438,4735,5090,6170,6352,6629,6891,7213,7588,8009,8686,9077,9288,9659,10335,10689,11024,11394,11638,12439,12717,15074,15280,15536,15754,18535,
#Partially deleted in new
chr3	184319198	184325021	chr3:184319198-184325021	0	+	184319756	184325021	789624	13	45,113,93,67,822,89,187,134,159,186,198,147,144,	0,490,1431,1728,2083,3163,3345,3622,3884,4209,4581,5002,5679,
#Deleted in new
chr3	184319624	184321534	chr3:184319624-184321534	0	+	184319624	184319624	8553170	4	177,93,67,253,	0,1005,1302,1657,
#Partially deleted in new
chr3	184319756	184334908	chr3:184319756-184334908	1	+	184319756	184334908	789624	27	45,93,67,822,89,187,134,159,189,198,147,237,105,160,101,103,103,233,119,173,126,82,99,135,82,141,182,	0,873,1170,1525,2605,2787,3064,3326,3648,4023,4444,5121,5512,5723,6094,6770,7124,7459,7829,8073,8874,9152,11509,11715,11971,12189,14970,
#Deleted in new
chr3	184320296	184321603	chr3:184320296-184321603	0	+	184320680	184321603	789624	4	42,93,67,322,	0,333,630,985,
#Partially deleted in new
chr3	184320312	184335351	chr3:184320312-184335351	1	+	184320680	184334908	0	26	410,67,822,89,187,134,159,189,198,147,237,105,160,101,103,103,233,119,173,126,82,99,135,82,141,625,	0,614,969,2049,2231,2508,2770,3092,3467,3888,4565,4956,5167,5538,6214,6568,6903,7273,7517,8318,8596,10953,11159,11415,11633,14414,
#Deleted in new
chr3	184320445	184321661	chr3:184320445-184321661	0	+	184320680	184321661	789624	4	56,93,67,380,	0,184,481,836,
#Deleted in new
chr3	184320460	184322027	chr3:184320460-184322027	0	+	184320680	184322027	789624	4	77,93,67,746,	0,169,466,821,
#Deleted in new
chr3	184320484	184321507	chr3:184320484-184321507	0	+	184320484	184320484	8553170	3	238,67,254,	0,442,769,
#Partially deleted in new
chr3	184320663	184335347	chr3:184320663-184335347	1	+	184320680	184334908	0	26	59,67,822,89,187,134,159,186,198,147,237,105,160,101,103,103,233,119,173,126,82,99,135,82,141,621,	0,263,618,1698,1880,2157,2419,2744,3116,3537,4214,4605,4816,5187,5863,6217,6552,6922,7166,7967,8245,10602,10808,11064,11282,14063,
#Partially deleted in new
chr3	184325103	184327303	chr3:184325103-184327303	0	+	184325103	184327303	789624	7	11,105,160,107,103,103,88,	0,165,376,747,1423,1777,2112,
#Partially deleted in new
chr3	184325298	184326908	chr3:184325298-184326908	0	+	184325298	184325298	8553170	4	341,101,103,28,	0,552,1228,1582,
#Deleted in new
chr3	184325695	184325771	chr3:184325695-184325771	3	+	184325695	184325695	789624	1	76,	0,
#Deleted in new
chr3	184327285	184327915	chr3:184327285-184327915	0	+	184327285	184327285	8553170	2	163,330,	0,300,
#Partially deleted in new
chr3	184327948	184332086	chr3:184327948-184332086	0	+	184327948	184331741	789624	7	54,126,82,99,135,113,141,	0,682,960,3317,3523,3748,3997,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	184328116	184335054	chr3:184328116-184335054	0	+	184328116	184328116	8553170	6	1019,99,135,82,141,328,	0,3149,3355,3611,3829,6610,
#Partially deleted in new
chr3	184328615	184335317	chr3:184328615-184335317	0	+	184328615	184328615	8553170	7	141,82,99,135,82,141,591,	0,293,2650,2856,3112,3330,6111,
#Partially deleted in new
chr3	184328668	184331853	chr3:184328668-184331853	0	+	184328668	184328668	8553170	4	88,82,341,126,	0,240,2597,3059,
#Deleted in new
chr3	184331313	184332105	chr3:184331313-184332105	0	+	184331313	184331313	8553170	3	51,135,378,	0,158,414,
#Partially deleted in new
chr3	184335925	184345033	chr3:184335925-184345033	1	+	184341747	184344970	789624	7	198,61,143,94,183,117,539,	0,1385,2461,5798,6140,6818,8569,
#Partially deleted in new
chr3	184335928	184346239	chr3:184335928-184346239	1	+	184342109	184345631	789624	6	195,61,183,117,310,798,	0,1382,6137,6815,8566,9513,
#Partially deleted in new
chr3	184335936	184346273	chr3:184335936-184346273	1	+	184341747	184344970	789624	6	187,61,94,183,117,1779,	0,1374,5787,6129,6807,8558,
#Partially deleted in new
chr3	184335944	184342860	chr3:184335944-184342860	0	+	184341747	184342860	789624	4	179,94,183,117,	0,5779,6121,6799,
#Partially deleted in new
chr3	184337176	184344819	chr3:184337176-184344819	0	+	184341747	184344819	789624	6	32,61,94,183,117,325,	0,134,4547,4889,5567,7318,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	184337204	184348421	chr3:184337204-184348421	1	+	184337630	184345477	789624	7	514,143,94,183,117,419,2980,	0,1182,4519,4861,5539,7290,8237,
#Partially deleted in new
chr3	184337451	184345173	chr3:184337451-184345173	3	+	184337630	184344970	789624	6	267,143,94,183,117,679,	0,935,4272,4614,5292,7043,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	184337564	184341460	chr3:184337564-184341460	0	+	184337564	184337564	8553170	2	154,3074,	0,822,
#Partially deleted in new
chr3	184338828	184344986	chr3:184338828-184344986	1	+	184341747	184344970	789624	5	152,94,183,117,492,	0,2895,3237,3915,5666,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	184340469	184346275	chr3:184340469-184346275	1	+	184341833	184344970	789624	3	1779,117,1781,	0,2274,4025,
#Partially deleted in new
chr3	184342121	184343139	chr3:184342121-184343139	0	+	184342121	184342121	8553170	2	127,396,	0,622,
#Partially deleted in new
chr3	184346184	184361651	chr3:184346184-184361651	3	-	184346605	184361479	789624	24	616,87,105,39,54,74,115,173,134,214,111,70,156,85,102,85,126,79,78,134,129,132,157,235,	0,750,5828,6108,6258,6552,6848,7065,7477,7916,8363,8719,9189,9509,10808,10997,11177,11435,11594,11777,11997,12497,12790,15232,
#Partially deleted in new
chr3	184346187	184361602	chr3:184346187-184361602	1	-	184346605	184361479	789624	24	613,87,105,39,54,74,115,173,134,214,60,70,156,85,102,85,126,79,78,134,129,132,157,186,	0,747,5825,6105,6255,6549,6845,7062,7474,7913,8360,8716,9186,9506,10805,10994,11174,11432,11591,11774,11994,12494,12787,15229,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	184346196	184349566	chr3:184346196-184349566	0	-	184346196	184346196	8553170	2	604,2632,	0,738,
#Partially deleted in new
chr3	184346198	184361629	chr3:184346198-184361629	0	-	184357053	184361479	789624	21	602,87,105,39,54,74,115,173,214,167,70,156,85,102,85,126,134,129,132,157,213,	0,736,5814,6094,6244,6538,6834,7051,7902,8349,8705,9175,9495,10794,10983,11163,11763,11983,12483,12776,15218,
#Partially deleted in new
chr3	184346220	184357020	chr3:184346220-184357020	0	-	184354287	184357020	789624	13	580,87,39,54,74,115,173,134,214,105,156,85,28,	0,714,6072,6222,6516,6812,7029,7441,7880,8327,9153,9473,10772,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr3	184346229	184361455	chr3:184346229-184361455	0	-	184346229	184346229	8553170	19	571,87,105,39,54,74,115,173,214,111,2191,85,126,79,134,129,132,157,39,	0,705,5783,6063,6213,6507,6803,7020,7871,8318,8674,10952,11132,11390,11732,11952,12452,12745,15187,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr3	184346272	184361650	chr3:184346272-184361650	0	-	184357053	184361479	789624	21	528,87,105,39,54,74,115,173,254,214,111,70,156,1401,85,126,134,129,132,157,234,	0,662,5740,6020,6170,6464,6760,6977,7269,7828,8275,8631,9101,9421,10909,11089,11689,11909,12409,12702,15144,
#Partially deleted in new
chr3	184346397	184361603	chr3:184346397-184361603	1	-	184346605	184361479	789624	23	403,87,105,39,54,74,115,173,134,214,111,70,156,85,102,85,126,79,78,134,129,157,187,	0,537,5615,5895,6045,6339,6635,6852,7264,7703,8150,8506,8976,9296,10595,10784,10964,11222,11381,11564,11784,12577,15019,
#Partially deleted in new
chr3	184346519	184361603	chr3:184346519-184361603	1	-	184346605	184361479	789624	23	281,105,39,54,74,115,173,134,214,111,70,156,85,102,85,126,79,78,134,129,132,157,187,	0,5493,5773,5923,6217,6513,6730,7142,7581,8028,8384,8854,9174,10473,10662,10842,11100,11259,11442,11662,12162,12455,14897,
#Partially deleted in new
chr3	184352293	184357697	chr3:184352293-184357697	0	-	184354287	184357697	789624	14	38,54,74,115,173,134,214,111,156,85,102,85,126,78,	0,149,443,739,956,1368,1807,2254,3080,3400,4699,4888,5068,5326,
#Deleted in new
chr3	184352415	184353296	chr3:184352415-184353296	0	-	184352415	184352415	8553170	3	395,115,47,	0,617,834,
#Deleted in new
chr3	184352745	184353695	chr3:184352745-184353695	0	-	184352745	184352745	8553170	3	65,115,446,	0,287,504,
#Partially deleted in new
chr3	184353321	184361448	chr3:184353321-184361448	0	-	184354287	184361448	789624	14	474,214,105,156,85,102,85,126,79,134,129,132,157,32,	0,779,1226,2052,2372,3671,3860,4040,4298,4640,4860,5360,5653,8095,
#Partially deleted in new
chr3	184353367	184361444	chr3:184353367-184361444	0	-	184357053	184361444	789624	14	55,134,214,111,626,85,102,85,126,134,129,132,157,28,	0,294,733,1180,1536,2326,3625,3814,3994,4594,4814,5314,5607,8049,
#Deleted in new
chr3	184354188	184354959	chr3:184354188-184354959	0	-	184354188	184354959	789624	3	126,105,56,	0,359,715,
#Partially deleted in new
chr3	184354265	184358049	chr3:184354265-184358049	0	-	184357053	184358049	789624	9	49,111,70,156,151,102,85,126,88,	0,282,638,1108,1428,2727,2916,3096,3696,
#Partially deleted in new
chr3	184354309	184359107	chr3:184354309-184359107	0	-	184354309	184359107	789624	14	5,111,70,156,85,102,85,126,79,78,134,129,102,133,	0,238,594,1064,1384,2683,2872,3052,3310,3469,3652,3872,4372,4665,
#Partially deleted in new
chr3	184354582	184357696	chr3:184354582-184357696	0	-	184355494	184357696	789624	8	76,70,156,85,58,85,126,77,	0,321,791,1111,2454,2599,2779,3037,
#Partially deleted in new
chr3	184355054	184361486	chr3:184355054-184361486	0	-	184355054	184355054	8553170	12	475,85,102,85,126,79,78,134,129,132,157,70,	0,639,1938,2127,2307,2565,2724,2907,3127,3627,3920,6362,
#Partially deleted in new
chr3	184355910	184357687	chr3:184355910-184357687	0	-	184355910	184355910	8553170	5	26,102,85,126,68,	0,1082,1271,1451,1709,
#Deleted in new
chr3	184357971	184358658	chr3:184357971-184358658	0	-	184357971	184357971	8553170	2	124,477,	0,210,
#Partially deleted in new
chr3	184361717	184368594	chr3:184361717-184368594	3	+	184363492	184368294	0	6	429,693,84,94,84,418,	0,1155,3248,3415,4999,6459,
#Deleted in new
chr3	184361722	184363527	chr3:184361722-184363527	0	+	184363492	184363527	789624	2	424,412,	0,1393,
#Partially deleted in new
chr3	184361788	184368550	chr3:184361788-184368550	1	+	184365000	184368294	0	5	358,84,94,84,374,	0,3177,3344,4928,6388,
#Deleted in new
chr3	184362442	184363249	chr3:184362442-184363249	0	+	184362442	184362442	8553170	2	62,377,	0,430,
#Partially deleted in new
chr3	184362614	184368287	chr3:184362614-184368287	0	+	184363492	184368287	789624	6	110,340,84,94,84,111,	0,611,2351,2518,4102,5562,
#Partially deleted in new
chr3	184363001	184368593	chr3:184363001-184368593	1	+	184363492	184368294	0	4	564,84,94,417,	0,1964,2131,5175,
#Partially deleted in new
chr3	184363360	184368591	chr3:184363360-184368591	1	+	184365000	184368294	0	4	214,84,94,415,	0,1605,1772,4816,
#Partially deleted in new
chr3	184363402	184368533	chr3:184363402-184368533	1	+	184365000	184368294	0	5	172,84,94,84,357,	0,1563,1730,3314,4774,
#Partially deleted in new
chr3	184363433	184368596	chr3:184363433-184368596	1	+	184363492	184368305	0	5	132,84,94,84,484,	0,1532,1699,3283,4679,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	184364450	184368434	chr3:184364450-184368434	0	+	184364450	184364450	8553170	4	599,94,84,258,	0,682,2266,3726,
#Partially deleted in new
chr3	184364954	184368253	chr3:184364954-184368253	0	+	184364954	184364954	8553170	3	272,84,77,	0,1762,3222,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	184365006	184365523	chr3:184365006-184365523	0	+	184365006	184365006	8553170	2	43,391,	0,126,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	184366514	184368538	chr3:184366514-184368538	0	+	184366514	184366514	8553170	2	286,362,	0,1662,
#Partially deleted in new
chr3	184371934	184378144	chr3:184371934-184378144	1	-	184372512	184376259	0	6	1244,168,87,128,158,70,	0,1480,3580,3953,4312,6140,
#Partially deleted in new
chr3	184371934	184378207	chr3:184371934-184378207	3	-	184372512	184376259	0	6	1244,168,87,128,158,133,	0,1480,3580,3953,4312,6140,
#Partially deleted in new
chr3	184371934	184379688	chr3:184371934-184379688	1	-	184372512	184378349	789624	7	1244,168,87,128,158,303,98,	0,1480,3580,3953,4312,6140,7656,
#Partially deleted in new
chr3	184372268	184378140	chr3:184372268-184378140	1	-	184372512	184376259	0	6	898,168,87,128,158,66,	0,1146,3246,3619,3978,5806,
#Partially deleted in new
chr3	184372326	184376259	chr3:184372326-184376259	1	-	184372597	184376259	789624	6	655,81,168,87,128,13,	0,771,1088,3188,3561,3920,
#Partially deleted in new
chr3	184372484	184381968	chr3:184372484-184381968	1	-	184372512	184378349	0	8	694,168,87,128,158,303,325,49,	0,930,3030,3403,3762,5590,8997,9435,
#Partially deleted in new
chr3	184372597	184376259	chr3:184372597-184376259	1	-	184372597	184376259	789624	5	564,168,87,128,13,	0,817,2917,3290,3649,
#Deleted in new
chr3	184372897	184373437	chr3:184372897-184373437	0	-	184373223	184373437	789624	3	84,141,23,	0,200,517,
#Deleted in new
chr3	184375942	184376259	chr3:184375942-184376259	0	-	184375942	184375942	8553170	2	158,13,	0,304,
#Partially deleted in new
chr3	184380072	184389829	chr3:184380072-184389829	3	+	184380318	184389422	789624	23	394,104,130,129,100,88,142,141,83,148,107,120,157,221,114,264,94,57,104,103,155,103,463,	0,619,1162,1423,1643,1860,2316,2561,2783,2943,3239,3450,4464,4945,5973,6419,6772,6978,7301,7858,8514,8820,9294,
#Partially deleted in new
chr3	184380072	184382747	chr3:184380072-184382747	0	+	184380318	184381088	789624	9	394,104,51,130,129,100,88,142,114,	0,619,1007,1162,1423,1643,1860,2316,2561,
#Partially deleted in new
chr3	184380072	184389829	chr3:184380072-184389829	0	+	184380318	184383032	789624	23	394,104,130,129,100,88,142,141,54,148,107,120,157,221,114,264,94,57,104,103,155,103,463,	0,619,1162,1423,1643,1860,2316,2561,2812,2943,3239,3450,4464,4945,5973,6419,6772,6978,7301,7858,8514,8820,9294,
#Partially deleted in new
chr3	184380072	184389829	chr3:184380072-184389829	0	+	184380318	184381108	789624	24	394,104,55,130,129,100,88,142,141,54,148,107,120,157,221,114,264,94,57,104,103,155,103,463,	0,619,1003,1162,1423,1643,1860,2316,2561,2812,2943,3239,3450,4464,4945,5973,6419,6772,6978,7301,7858,8514,8820,9294,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	184380072	184389829	chr3:184380072-184389829	0	+	184380072	184380072	8553170	16	394,104,130,129,100,1486,120,157,221,893,57,104,103,155,103,463,	0,619,1162,1423,1643,1860,3450,4464,4945,5973,6978,7301,7858,8514,8820,9294,
#Partially deleted in new
chr3	184380206	184389829	chr3:184380206-184389829	1	+	184380318	184389422	789624	23	260,104,130,129,100,88,142,141,83,148,107,120,157,221,114,264,94,57,104,103,155,103,460,	0,485,1028,1289,1509,1726,2182,2427,2649,2809,3105,3316,4330,4811,5839,6285,6638,6844,7167,7724,8380,8686,9163,
#Partially deleted in new
chr3	184380318	184389829	chr3:184380318-184389829	1	+	184380318	184389422	789624	22	148,104,130,129,100,88,142,141,83,148,107,157,221,114,264,94,57,104,103,155,103,463,	0,373,916,1177,1397,1614,2070,2315,2537,2697,2993,4218,4699,5727,6173,6526,6732,7055,7612,8268,8574,9048,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr3	184380320	184390736	chr3:184380320-184390736	0	+	184380320	184380320	8553170	20	146,104,130,129,100,88,142,530,107,120,157,221,114,264,94,57,103,155,103,1370,	0,371,914,1175,1395,1612,2068,2313,2991,3202,4216,4697,5725,6171,6524,6730,7610,8266,8572,9046,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	184380347	184381160	chr3:184380347-184381160	0	+	184380347	184380347	8553170	2	119,469,	0,344,
#Partially deleted in new
chr3	184380451	184381749	chr3:184380451-184381749	0	+	184380451	184380451	8553170	4	15,104,130,254,	0,240,783,1044,
#Partially deleted in new
chr3	184380622	184381968	chr3:184380622-184381968	0	+	184380622	184380622	8553170	5	173,130,129,100,36,	0,612,873,1093,1310,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	184380991	184382042	chr3:184380991-184382042	0	+	184380991	184380991	8553170	5	139,130,129,100,110,	0,243,504,724,941,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	184381018	184382034	chr3:184381018-184382034	0	+	184381018	184381018	8553170	4	346,129,100,102,	0,477,697,914,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	184381018	184381890	chr3:184381018-184381890	0	+	184381018	184381018	8553170	4	112,130,129,175,	0,216,477,697,
#Deleted in new
chr3	184381405	184382173	chr3:184381405-184382173	0	+	184381405	184381405	8553170	3	219,100,241,	0,310,527,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	184382144	184382930	chr3:184382144-184382930	0	+	184382144	184382144	8553170	2	386,297,	0,489,
#Partially deleted in new
chr3	184384787	184387401	chr3:184384787-184387401	0	+	184384787	184384787	8553170	5	451,710,94,57,28,	0,1258,2057,2263,2586,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	184399789	184457844	chr3:184399789-184457844	0	+	184399789	184399789	8553170	5	67,142,424,186,610,	0,25907,26802,51105,57445,
#Partially deleted in new
chr3	184401536	184426836	chr3:184401536-184426836	0	+	184401536	184401536	8553170	3	149,180,245,	0,21416,25055,
#Partially deleted in new
chr3	184401629	184439648	chr3:184401629-184439648	0	+	184401629	184401629	8553170	3	56,424,405,	0,24962,37614,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	184419868	184457891	chr3:184419868-184457891	3	+	184419868	184419868	8553170	6	1848,180,142,424,186,657,	0,3084,5828,6723,31026,37366,
#Deleted in new
chr3	184499483	184500370	chr3:184499483-184500370	7	-	184499483	184499483	16724991	1	887,	0,
#Partially deleted in new
chr3	184505112	184508399	chr3:184505112-184508399	3	+	184505112	184505112	8553170	2	67,660,	0,2627,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	184546713	184556918	chr3:184546713-184556918	3	-	184546713	184546713	789624	2	464,107,	0,10098,
#Partially deleted in new
chr3	184561783	184582409	chr3:184561783-184582409	3	+	184562235	184581622	0	16	570,65,673,156,342,125,160,109,53,123,248,216,150,194,156,896,	0,9534,10720,14046,15058,15559,15874,16114,16630,17693,17903,18618,18945,19188,19469,19730,
#Deleted in new
chr3	184577611	184578173	chr3:184577611-184578173	0	+	184577611	184577611	8553170	2	206,276,	0,286,
#Partially deleted in new
chr3	184579747	184580700	chr3:184579747-184580700	0	+	184579747	184579747	8553170	2	187,299,	0,654,
#Deleted in new
chr3	184710366	184712002	chr3:184710366-184712002	3	-	184710897	184711821	789624	1	1636,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	184734074	184738949	chr3:184734074-184738949	3	+	184734074	184734074	8553170	3	166,220,315,	0,3477,4560,
#Deleted in new
chr3	184741936	184742462	chr3:184741936-184742462	3	+	184741936	184741936	8553170	1	526,	0,
#Deleted in new
chr3	184742817	184743284	chr3:184742817-184743284	3	+	184742817	184742817	8553170	1	467,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	184756388	184773155	chr3:184756388-184773155	3	-	184756388	184756388	789624	3	2265,150,176,	0,8931,16591,
#Partially deleted in new
chr3	184812142	185052614	chr3:184812142-185052614	1	+	184824632	185052025	789624	47	83,241,69,131,94,33,61,125,87,68,154,60,108,81,171,75,36,91,47,90,47,223,90,52,43,73,120,72,120,57,83,85,99,90,47,148,90,43,104,82,83,81,170,166,54,81,739,	0,12402,14020,20546,22506,26571,27555,36928,37793,40357,41714,41971,43568,47842,50754,54733,55881,56803,57339,58573,73967,82560,86422,88778,101376,102838,103212,107984,112719,114451,116308,117437,118327,124103,128054,145231,152325,154528,159506,170423,170869,181840,184189,187553,212193,236336,239733,
#Partially deleted in new
chr3	184812170	185052612	chr3:184812170-185052612	1	+	184824632	185052025	789624	47	55,241,69,131,94,33,55,125,87,68,154,60,108,81,171,75,36,91,47,90,47,223,90,52,43,73,120,72,120,57,83,85,99,90,47,148,90,43,104,82,83,81,170,166,54,81,737,	0,12374,13992,20518,22478,26543,27527,36900,37765,40329,41686,41943,43540,47814,50726,54705,55853,56775,57311,58545,73939,82532,86394,88750,101348,102810,103184,107956,112691,114423,116280,117409,118299,124075,128026,145203,152297,154500,159478,170395,170841,181812,184161,187525,212165,236308,239705,
#Partially deleted in new
chr3	184812182	185052604	chr3:184812182-185052604	1	+	184824632	185052025	789624	45	43,241,69,131,94,33,55,125,87,68,154,60,108,81,171,75,36,91,47,90,90,52,43,73,120,72,120,57,83,85,99,90,47,148,90,43,104,82,83,81,170,166,54,81,729,	0,12362,13980,20506,22466,26531,27515,36888,37753,40317,41674,41931,43528,47802,50714,54693,55841,56763,57299,58533,86382,88738,101336,102798,103172,107944,112679,114411,116268,117397,118287,124063,128014,145191,152285,154488,159466,170383,170829,181800,184149,187513,212153,236296,239693,
#Partially deleted in new
chr3	184812194	184849141	chr3:184812194-184849141	0	+	184824632	184849141	789624	9	31,86,241,69,131,94,33,55,71,	0,11952,12350,13968,20494,22454,26519,27503,36876,
#Partially deleted in new
chr3	184812195	184816230	chr3:184812195-184816230	0	+	184812195	184812195	8553170	2	30,447,	0,3588,
#Partially deleted in new
chr3	184812206	185052600	chr3:184812206-185052600	3	+	184824632	185052025	789624	48	19,241,69,131,94,33,55,6,125,87,68,154,60,108,81,171,75,36,91,47,90,47,223,90,52,43,73,120,72,120,57,83,85,99,90,47,148,90,43,104,82,83,81,170,166,54,81,725,	0,12338,13956,20482,22442,26507,27491,31033,36864,37729,40293,41650,41907,43504,47778,50690,54669,55817,56739,57275,58509,73903,82496,86358,88714,101312,102774,103148,107920,112655,114387,116244,117373,118263,124039,127990,145167,152261,154464,159442,170359,170805,181776,184125,187489,212129,236272,239669,
#Partially deleted in new
chr3	184812438	184826231	chr3:184812438-184826231	0	+	184824632	184826231	789624	3	351,241,69,	0,12106,13724,
#Partially deleted in new
chr3	184812508	184815820	chr3:184812508-184815820	0	+	184812508	184812508	8553170	2	281,37,	0,3275,
#Partially deleted in new
chr3	184812515	184815820	chr3:184812515-184815820	0	+	184812515	184812515	8553170	3	274,123,37,	0,1229,3268,
#Partially deleted in new
chr3	184817205	184834717	chr3:184817205-184834717	0	+	184824632	184834717	789624	5	39,241,69,131,69,	0,7339,8957,15483,17443,
#Partially deleted in new
chr3	184817305	184834660	chr3:184817305-184834660	0	+	184824632	184834660	789624	5	139,241,69,131,12,	0,7239,8857,15383,17343,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	184824544	184840537	chr3:184824544-184840537	1	+	184824632	184838761	789624	5	241,69,131,94,1824,	0,1618,8144,10104,14169,
#Partially deleted in new
chr3	184826162	184852538	chr3:184826162-184852538	0	+	184826162	184826162	8553170	7	69,131,94,33,125,87,39,	0,6526,8486,12551,22908,23773,26337,
#Partially deleted in new
chr3	184832695	184849347	chr3:184832695-184849347	0	+	184832695	184832695	8553170	5	124,94,33,55,277,	0,1953,6018,7002,16375,
#Partially deleted in new
chr3	184832756	184834951	chr3:184832756-184834951	0	+	184832756	184832756	8553170	2	63,303,	0,1892,
#Partially deleted in new
chr3	184834674	184838746	chr3:184834674-184838746	0	+	184834674	184838746	789624	3	68,84,33,	0,1572,4039,
#Partially deleted in new
chr3	184849028	184855746	chr3:184849028-184855746	0	+	184849028	184849028	8553170	6	167,87,68,154,60,36,	0,907,3471,4828,5085,6682,
#Partially deleted in new
chr3	184849452	184853886	chr3:184849452-184853886	0	+	184849452	184849452	8553170	3	570,68,30,	0,3047,4404,
#Partially deleted in new
chr3	184855776	184868310	chr3:184855776-184868310	0	+	184855776	184855776	8553170	5	42,81,171,75,287,	0,4208,7120,11099,12247,
#Partially deleted in new
chr3	184868988	184915408	chr3:184868988-184915408	0	+	184868988	184893327	789624	11	48,47,90,47,179,223,90,52,43,73,54,	0,493,1727,17121,24245,25714,29576,31932,44530,45992,46366,
#Partially deleted in new
chr3	184885968	185052311	chr3:184885968-185052311	0	+	184885968	184885968	8553170	27	188,223,90,52,43,73,120,72,120,57,83,85,99,90,47,148,90,43,104,82,83,81,170,166,54,81,436,	0,8734,12596,14952,27550,29012,29386,34158,38893,40625,42482,43611,44501,50277,54228,71405,78499,80702,85680,96597,97043,108014,110363,113727,138367,162510,165907,
#Partially deleted in new
chr3	184894702	184901363	chr3:184894702-184901363	0	+	184894702	184894702	8553170	3	223,90,443,	0,3862,6218,
#Partially deleted in new
chr3	184915382	184926646	chr3:184915382-184926646	0	+	184915382	184922437	789624	5	92,72,55,120,53,	0,4744,7046,9479,11211,
#Partially deleted in new
chr3	184919055	184930560	chr3:184919055-184930560	0	+	184919055	184919055	8553170	7	60,72,120,57,83,85,91,	0,1071,5806,7538,9395,10524,11414,
#Partially deleted in new
chr3	184982417	184996501	chr3:184982417-184996501	0	+	184982417	184982417	8553170	4	230,83,81,170,	0,594,11565,13914,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	185078049	185153014	chr3:185078049-185153014	3	-	185083006	185152823	789624	2	5514,387,	0,74578,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	185162870	185180583	chr3:185162870-185180583	0	+	185162870	185162870	8553170	4	296,123,70,81,	0,14445,17069,17632,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	185162900	185191955	chr3:185162900-185191955	3	+	185162900	185162900	789624	7	84,119,70,214,551,109,269,	0,14419,17039,17602,18235,19931,28786,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	185190623	185254098	chr3:185190623-185254098	3	-	185192225	185254022	789624	7	2864,342,105,112,173,104,150,	0,13792,27512,38808,44666,57790,63325,
#Partially deleted in new
chr3	185191969	185254048	chr3:185191969-185254048	1	-	185192225	185235352	789624	7	1518,342,105,112,173,104,223,	0,12446,26166,37462,43320,56444,61856,
#Partially deleted in new
chr3	185204655	185235462	chr3:185204655-185235462	0	-	185204655	185204655	8553170	2	102,173,	0,30634,
#Partially deleted in new
chr3	185218193	185254049	chr3:185218193-185254049	0	-	185218193	185218193	8553170	6	47,31,112,173,104,101,	0,8634,11238,17096,30220,35755,
#Deleted in new
chr3	185245459	185246441	chr3:185245459-185246441	7	-	185245459	185245459	16724991	1	982,	0,
#Partially deleted in new
chr3	185247944	185254031	chr3:185247944-185254031	1	-	185248360	185254022	789624	2	573,83,	0,6004,
#Partially deleted in new
chr3	185248432	185281990	chr3:185248432-185281990	0	-	185248432	185248432	8553170	3	85,146,81,	0,31746,33477,
#Deleted in new
chr3	185253209	185253272	chr3:185253209-185253272	3	-	185253209	185253209	5263520	1	63,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	185282940	185293079	chr3:185282940-185293079	1	+	185285605	185291697	789624	3	87,127,1467,	0,2576,8672,
#Partially deleted in new
chr3	185282952	185482749	chr3:185282952-185482749	1	+	185285605	185482456	789624	13	75,127,192,159,159,109,110,117,138,787,71,298,395,	0,2564,160492,164836,166947,168334,180597,182794,183873,190022,194373,197279,199402,
#Partially deleted in new
chr3	185282960	185428920	chr3:185282960-185428920	0	+	185428581	185428920	789624	3	67,127,424,	0,2556,145536,
#Partially deleted in new
chr3	185282960	185329263	chr3:185282960-185329263	0	+	185285605	185291697	789624	4	67,127,148,640,	0,2556,8652,45663,
#Partially deleted in new
chr3	185282976	185482456	chr3:185282976-185482456	3	+	185428581	185482456	789624	15	51,119,560,184,192,159,159,109,110,117,138,787,71,298,102,	0,2548,145520,154470,160468,164812,166923,168310,180573,182770,183849,189998,194349,197255,199378,
#Partially deleted in new
chr3	185283025	185291917	chr3:185283025-185291917	1	+	185285605	185291697	789624	3	94,127,305,	0,2491,8587,
#Partially deleted in new
chr3	185285392	185291749	chr3:185285392-185291749	1	+	185285605	185291697	789624	2	251,137,	0,6220,
#Partially deleted in new
chr3	185328887	185428994	chr3:185328887-185428994	0	+	185428581	185428994	789624	2	75,498,	0,99609,
#Partially deleted in new
chr3	185328894	185451534	chr3:185328894-185451534	0	+	185428581	185437468	789624	7	68,450,184,192,159,159,248,	0,99602,108552,114550,118894,121005,122392,
#Partially deleted in new
chr3	185328894	185482811	chr3:185328894-185482811	1	+	185329206	185482456	789624	14	68,176,184,192,159,159,109,110,117,138,787,71,298,457,	0,179,108552,114550,118894,121005,122392,134655,136852,137931,144080,148431,151337,153460,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	185363119	185489097	chr3:185363119-185489097	1	+	185428581	185482456	789624	14	249,560,184,192,159,159,109,110,117,138,787,71,298,6743,	0,65377,74327,80325,84669,86780,88167,100430,102627,103706,109855,114206,117112,119235,
#Partially deleted in new
chr3	185363241	185482601	chr3:185363241-185482601	0	+	185428581	185447796	789624	12	127,560,159,159,109,110,117,138,787,71,298,247,	0,65255,84547,86658,88045,100308,102505,103584,109733,114084,116990,119113,
#Deleted in new
chr3	185417494	185418778	chr3:185417494-185418778	7	-	185417494	185417494	16724991	1	1284,	0,
#Partially deleted in new
chr3	185428496	185447947	chr3:185428496-185447947	0	+	185428581	185443554	789624	3	560,192,159,	0,14948,19292,
#Partially deleted in new
chr3	185437446	185443707	chr3:185437446-185443707	0	+	185437446	185437446	8553170	2	184,263,	0,5998,
#Partially deleted in new
chr3	185437544	185465863	chr3:185437544-185465863	0	+	185437544	185465863	789624	6	86,159,159,109,110,117,	0,10244,12355,13742,26005,28202,
#Partially deleted in new
chr3	185476495	185499035	chr3:185476495-185499035	0	-	185477120	185498961	789624	4	89,105,154,193,	0,547,20332,22347,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	185480159	185498985	chr3:185480159-185498985	0	-	185480159	185480159	8553170	6	343,94,139,162,154,143,	0,1058,14463,14994,16668,18683,
#Partially deleted in new
chr3	185482670	185490027	chr3:185482670-185490027	0	-	185482670	185482670	8553170	4	470,96,72,105,	0,634,6274,7252,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	185489600	185499057	chr3:185489600-185499057	3	-	185491536	185498961	789624	5	2157,139,162,154,215,	0,5022,5553,7227,9242,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	185490996	185498987	chr3:185490996-185498987	1	-	185491751	185498961	789624	3	761,154,145,	0,5831,7846,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	185492275	185499057	chr3:185492275-185499057	0	-	185492275	185492275	8553170	2	4706,215,	0,6567,
#Partially deleted in new
chr3	185495227	185498722	chr3:185495227-185498722	0	-	185495227	185495227	8553170	3	88,154,321,	0,1600,3174,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	185506261	185552613	chr3:185506261-185552613	3	-	185508789	185552471	789624	10	2616,174,112,96,168,90,102,109,368,191,	0,5262,8148,10805,12880,17809,21222,27309,28503,46161,
#Partially deleted in new
chr3	185508065	185552558	chr3:185508065-185552558	1	-	185508789	185552471	789624	9	812,174,112,96,168,90,109,368,136,	0,3458,6344,9001,11076,16005,25505,26699,44357,
#Partially deleted in new
chr3	185508556	185517081	chr3:185508556-185517081	0	-	185508856	185517081	789624	4	321,73,112,15,	0,2967,5853,8510,
#Partially deleted in new
chr3	185519143	185533660	chr3:185519143-185533660	0	-	185519143	185533660	789624	2	166,90,	0,14427,
#Partially deleted in new
chr3	185533675	185552510	chr3:185533675-185552510	0	-	185546877	185552471	789624	4	4,368,96,88,	0,1089,13201,18747,
#Partially deleted in new
chr3	185582495	185609285	chr3:185582495-185609285	0	+	185582554	185609285	789624	7	322,56,134,67,91,169,39,	0,7618,15916,16462,18269,23834,26751,
#Partially deleted in new
chr3	185582783	185606490	chr3:185582783-185606490	0	+	185582783	185582783	8553170	6	80,56,134,67,91,161,	0,7330,15628,16174,17981,23546,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	185586173	185633551	chr3:185586173-185633551	3	+	185586413	185629844	0	17	341,56,134,67,91,169,104,95,52,64,177,132,204,80,85,96,3770,	0,3940,12238,12784,14591,20156,23073,25477,26433,27171,28390,31306,33125,35652,37824,40124,43608,
#Partially deleted in new
chr3	185586240	185609318	chr3:185586240-185609318	0	+	185586413	185599018	789624	7	274,56,134,33,91,169,72,	0,3873,12171,12751,14524,20089,23006,
#Partially deleted in new
chr3	185586294	185630405	chr3:185586294-185630405	0	+	185586413	185600788	789624	16	220,56,134,91,169,104,95,52,64,177,132,204,80,85,96,624,	0,3819,12117,14470,20035,22952,25356,26312,27050,28269,31185,33004,35531,37703,40003,43487,
#Partially deleted in new
chr3	185586294	185606491	chr3:185586294-185606491	0	+	185586413	185598983	789624	5	220,56,67,91,162,	0,3819,12663,14470,20035,
#Partially deleted in new
chr3	185586297	185600825	chr3:185586297-185600825	0	+	185586413	185598401	789624	5	217,56,152,67,61,	0,3816,12096,12660,14467,
#Partially deleted in new
chr3	185598964	185613511	chr3:185598964-185613511	0	+	185598964	185598964	8553170	7	60,91,169,104,95,52,167,	0,1800,7365,10282,12686,13642,14380,
#Deleted in new
chr3	185606574	185606873	chr3:185606574-185606873	7	+	185606574	185606574	16724991	1	299,	0,
#Partially deleted in new
chr3	185609002	185613374	chr3:185609002-185613374	0	+	185609002	185609002	8553170	4	348,95,52,30,	0,2648,3604,4342,
#Partially deleted in new
chr3	185611527	185617509	chr3:185611527-185617509	0	+	185611527	185611527	8553170	5	218,52,64,177,30,	0,1079,1817,3036,5952,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	185612221	185613644	chr3:185612221-185613644	0	+	185612221	185612221	8553170	2	437,300,	0,1123,
#Partially deleted in new
chr3	185613354	185626307	chr3:185613354-185626307	0	+	185613354	185626307	789624	6	54,177,204,80,85,10,	0,1209,5944,8471,10643,12943,
#Partially deleted in new
chr3	185614502	185619519	chr3:185614502-185619519	0	+	185614502	185614502	8553170	3	238,132,221,	0,2977,4796,
#Partially deleted in new
chr3	185643738	185825056	chr3:185643738-185825056	3	-	185645530	185824960	0	16	1885,114,132,75,117,69,129,136,123,135,273,64,52,49,61,274,	0,3286,5664,8355,13547,14602,28802,31557,32052,43318,45616,48960,52873,54560,179414,181044,
#Partially deleted in new
chr3	185643974	185825024	chr3:185643974-185825024	1	-	185645530	185824960	0	15	1649,114,132,75,117,69,136,123,135,273,64,52,49,61,242,	0,3050,5428,8119,13311,14366,31321,31816,43082,45380,48724,52637,54324,179178,180808,
#Partially deleted in new
chr3	185643974	185825012	chr3:185643974-185825012	1	-	185645530	185824960	789624	16	1649,114,132,75,117,69,129,136,123,135,273,82,52,49,61,230,	0,3050,5428,8119,13311,14366,28566,31321,31816,43082,45380,48724,52637,54324,179178,180808,
#Partially deleted in new
chr3	185645500	185821131	chr3:185645500-185821131	1	-	185645530	185821061	0	15	123,114,132,75,117,69,129,136,123,135,273,64,52,49,120,	0,1524,3902,6593,11785,12840,27040,29795,30290,41556,43854,47198,51111,52798,175511,
#Partially deleted in new
chr3	185646879	185649523	chr3:185646879-185649523	0	-	185646879	185646879	8553170	2	259,121,	0,2523,
#Partially deleted in new
chr3	185649402	185689238	chr3:185649402-185689238	0	-	185649402	185649402	8553170	8	132,75,117,69,136,123,135,131,	0,2691,7883,8938,25893,26388,37654,39705,
#Deleted in new
chr3	185675015	185675846	chr3:185675015-185675846	0	-	185675015	185675015	8553170	2	416,56,	0,775,
#Partially deleted in new
chr3	185689454	185823271	chr3:185689454-185823271	0	-	185689454	185689454	8553170	6	173,64,52,52,49,119,	0,3244,3722,7157,8844,133698,
#Partially deleted in new
chr3	185689554	185821131	chr3:185689554-185821131	0	-	185689554	185689554	8553170	5	73,64,52,49,120,	0,3144,7057,8744,131457,
#Partially deleted in new
chr3	185696414	185824892	chr3:185696414-185824892	0	-	185696414	185696414	8553170	4	249,49,61,110,	0,1884,126738,128368,
#Partially deleted in new
chr3	185712527	185716892	chr3:185712527-185716892	0	+	185712527	185712527	8553170	2	135,452,	0,3913,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	185713291	185718167	chr3:185713291-185718167	1	+	185713291	185713291	8553170	2	197,1727,	0,3149,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	185722463	185729787	chr3:185722463-185729787	0	+	185722463	185722463	8553170	5	70,172,208,127,115,	0,1969,2403,5995,7209,
#Partially deleted in new
chr3	185728243	185728587	chr3:185728243-185728587	0	+	185728243	185728243	8553170	2	93,129,	0,215,
#Deleted in new
chr3	185814054	185821103	chr3:185814054-185821103	0	-	185814054	185814054	8553170	2	46,92,	0,6957,
#Partially deleted in new
chr3	185915905	185938136	chr3:185915905-185938136	3	-	185917714	185937860	0	9	1820,74,60,84,116,189,163,134,312,	0,2459,3531,5198,6105,7890,9558,10695,21919,
#Partially deleted in new
chr3	185916743	185929073	chr3:185916743-185929073	0	-	185916743	185916743	8553170	8	982,74,60,84,116,189,163,2473,	0,1621,2693,4360,5267,7052,8720,9857,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	185916748	185925264	chr3:185916748-185925264	0	-	185916748	185916748	8553170	6	977,74,60,84,116,1469,	0,1616,2688,4355,5262,7047,
#Partially deleted in new
chr3	185917154	185923893	chr3:185917154-185923893	0	-	185917714	185923893	789624	5	571,74,84,116,98,	0,1210,3949,4856,6641,
#Partially deleted in new
chr3	185917327	185922107	chr3:185917327-185922107	0	-	185917714	185922107	789624	5	398,71,60,84,97,	0,1037,2109,3776,4683,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	185917328	185923809	chr3:185917328-185923809	0	-	185917328	185917328	8553170	5	397,74,60,84,1799,	0,1036,2108,3775,4682,
#Partially deleted in new
chr3	185917328	185937420	chr3:185917328-185937420	0	-	185917328	185917328	8553170	10	397,74,60,84,116,189,163,134,276,2992,	0,1036,2108,3775,4682,6467,8135,9272,14248,17100,
#Partially deleted in new
chr3	185917329	185938029	chr3:185917329-185938029	0	-	185931771	185937860	0	10	396,74,60,84,116,189,163,134,276,205,	0,1035,2107,3774,4681,6466,8134,9271,14247,20495,
#Partially deleted in new
chr3	185917714	185938103	chr3:185917714-185938103	1	-	185917714	185925496	0	8	11,74,60,84,116,189,163,279,	0,650,1722,3389,4296,6081,7749,20110,
#Partially deleted in new
chr3	185922042	185937998	chr3:185922042-185937998	0	-	185922042	185922042	8553170	4	84,213,163,174,	0,1753,3421,15782,
#Deleted in new
chr3	185925084	185937987	chr3:185925084-185937987	0	-	185925084	185925084	8553170	3	542,134,163,	0,1516,12740,
#Deleted in new
chr3	185925229	185926770	chr3:185925229-185926770	0	-	185925229	185925229	8553170	2	397,170,	0,1371,
#Deleted in new
chr3	185925272	185931618	chr3:185925272-185931618	0	-	185925272	185925272	8553170	3	354,134,42,	0,1328,6304,
#Deleted in new
chr3	185926726	185936600	chr3:185926726-185936600	0	-	185926726	185926726	8553170	4	8,276,77,363,	0,4850,7702,9511,
#Deleted in new
chr3	185931514	185938024	chr3:185931514-185938024	0	-	185931514	185931514	8553170	2	338,200,	0,6310,
#Deleted in new
chr3	185931753	185938013	chr3:185931753-185938013	1	-	185931771	185937860	0	2	99,189,	0,6071,
#Partially deleted in new
chr3	185959942	185980872	chr3:185959942-185980872	7	+	185959942	185959942	16724991	4	136,250,191,1215,	0,11672,15223,19715,
#Partially deleted in new
chr3	185959961	185975198	chr3:185959961-185975198	4	+	185959961	185959961	16724991	4	117,171,250,33,	0,8517,11653,15204,
#Partially deleted in new
chr3	185959966	185971846	chr3:185959966-185971846	4	+	185959966	185959966	16724991	3	112,230,232,	0,8512,11648,
#Partially deleted in new
chr3	185959968	185975758	chr3:185959968-185975758	4	+	185959968	185959968	16724991	4	110,239,250,593,	0,8510,11646,15197,
#Partially deleted in new
chr3	185959970	185971904	chr3:185959970-185971904	4	+	185959970	185959970	16724991	3	108,171,290,	0,8508,11644,
#Partially deleted in new
chr3	185960038	185979837	chr3:185960038-185979837	5	+	185960038	185960038	16724991	5	40,230,250,191,180,	0,8440,11576,15127,19619,
#Partially deleted in new
chr3	185976042	185979832	chr3:185976042-185979832	4	+	185976042	185976042	16724991	2	155,175,	0,3615,
#Partially deleted in new
chr3	186046307	186109112	chr3:186046307-186109112	3	-	186048638	186105868	0	13	2553,102,170,69,60,260,288,130,51,48,88,119,173,	0,5722,10767,11115,18109,19505,33509,34738,58997,59141,59317,59516,62632,
#Partially deleted in new
chr3	186048251	186108675	chr3:186048251-186108675	1	-	186048638	186105868	0	13	609,102,170,69,60,260,288,130,51,48,88,119,219,	0,3778,8823,9171,16165,17561,31565,32794,57053,57197,57373,57572,60205,
#Partially deleted in new
chr3	186048581	186064560	chr3:186048581-186064560	0	-	186048581	186048581	8553170	5	279,102,170,69,144,	0,3448,8493,8841,15835,
#Partially deleted in new
chr3	186048814	186065970	chr3:186048814-186065970	0	-	186052081	186065970	789624	4	46,102,60,158,	0,3215,15602,16998,
#Partially deleted in new
chr3	186064212	186079906	chr3:186064212-186079906	0	-	186064212	186064212	8553170	3	264,260,90,	0,1600,15604,
#Partially deleted in new
chr3	186064442	186079105	chr3:186064442-186079105	0	-	186064442	186064442	8553170	4	34,260,222,74,	0,1370,13550,14589,
#Partially deleted in new
chr3	186066004	186105942	chr3:186066004-186105942	0	-	186066004	186066004	8553170	3	68,51,119,	0,39300,39819,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	186076305	186076591	chr3:186076305-186076591	3	-	186076305	186076305	8553170	1	286,	0,
#Deleted in new
chr3	186079169	186080947	chr3:186079169-186080947	3	+	186079169	186079169	8553170	2	172,388,	0,1390,
#Partially deleted in new
chr3	186080016	186110318	chr3:186080016-186110318	0	-	186080016	186105868	789624	7	88,130,51,48,88,119,50,	0,1029,25288,25432,25608,25807,30252,
#Partially deleted in new
chr3	186080046	186108999	chr3:186080046-186108999	0	-	186080046	186105868	789624	7	58,130,51,48,88,119,60,	0,999,25258,25402,25578,25777,28893,
#Partially deleted in new
chr3	186080069	186108929	chr3:186080069-186108929	0	-	186080069	186105868	789624	7	35,130,51,48,88,119,102,	0,976,25235,25379,25555,25754,28758,
#Partially deleted in new
chr3	186081123	186108550	chr3:186081123-186108550	0	-	186081123	186105868	789624	7	52,112,51,48,88,119,94,	0,3045,24181,24325,24501,24700,27333,
#Partially deleted in new
chr3	186095119	186109081	chr3:186095119-186109081	0	-	186095119	186095119	8553170	6	194,51,48,88,119,142,	0,10185,10329,10505,10704,13820,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	186104925	186105490	chr3:186104925-186105490	0	-	186104925	186104925	8553170	2	430,42,	0,523,
#Deleted in new
chr3	186105409	186105724	chr3:186105409-186105724	0	-	186105409	186105409	8553170	2	87,100,	0,215,
#Partially deleted in new
chr3	186105667	186164967	chr3:186105667-186164967	0	-	186105667	186105667	8553170	4	45,119,61,70,	0,156,55935,59230,
#Partially deleted in new
chr3	186147200	186362237	chr3:186147200-186362237	3	-	186150089	186320459	789624	25	2988,61,121,178,91,65,161,90,86,75,80,60,93,117,89,118,123,75,50,171,63,166,77,315,292,	0,14402,17697,41001,64594,95303,104558,105892,110653,113238,114498,118046,120484,121600,125054,128346,132650,133469,137459,141509,150220,150863,159700,173192,214745,
#Partially deleted in new
chr3	186149236	186361988	chr3:186149236-186361988	1	-	186150089	186320459	789624	24	952,61,121,178,91,65,161,90,86,80,60,93,117,89,118,123,75,50,171,63,166,77,315,43,	0,12366,15661,38965,62558,93267,102522,103856,108617,112462,116010,118448,119564,123018,126310,130614,131433,135423,139473,148184,148827,157664,171156,212709,
#Partially deleted in new
chr3	186149456	186361957	chr3:186149456-186361957	1	-	186150089	186320459	789624	24	732,61,121,178,91,65,161,90,86,75,80,60,93,89,118,123,75,50,171,63,166,77,315,12,	0,12146,15441,38745,62338,93047,102302,103636,108397,110982,112242,115790,118228,122798,126090,130394,131213,135203,139253,147964,148607,157444,170936,212489,
#Partially deleted in new
chr3	186150164	186242637	chr3:186150164-186242637	0	-	186150164	186150164	8553170	6	24,61,121,178,91,134,	0,11438,14733,38037,61630,92339,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr3	186158182	186362077	chr3:186158182-186362077	0	-	186158182	186158182	8553170	24	3481,121,178,94,91,65,161,90,86,75,80,60,93,89,118,123,75,50,171,63,166,77,315,132,	0,6715,30019,49241,53612,84321,93576,94910,99671,102256,103516,107064,109502,114072,117364,121668,122487,126477,130527,139238,139881,148718,162210,203763,
#Partially deleted in new
chr3	186257763	186261959	chr3:186257763-186261959	0	-	186257763	186257763	8553170	3	176,75,261,	0,2675,3935,
#Partially deleted in new
chr3	186267607	186275653	chr3:186267607-186275653	0	-	186267607	186267607	8553170	3	170,89,107,	0,4647,7939,
#Partially deleted in new
chr3	186267684	186280714	chr3:186267684-186280714	0	-	186267684	186280714	789624	5	93,117,89,118,45,	0,1116,4570,7862,12985,
#Deleted in new
chr3	186279133	186281259	chr3:186279133-186281259	0	-	186279133	186279133	8553170	3	840,75,168,	0,1536,1958,
#Partially deleted in new
chr3	186306707	186320488	chr3:186306707-186320488	0	-	186306707	186306707	8553170	2	270,96,	0,13685,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	186440344	186445191	chr3:186440344-186445191	0	+	186440344	186440344	789624	3	65,198,286,	0,637,4561,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	186440403	186445058	chr3:186440403-186445058	1	+	186440403	186440403	8553170	4	45,140,237,153,	0,578,1441,4502,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	186440987	186450696	chr3:186440987-186450696	0	+	186440987	186440987	8553170	2	134,289,	0,9420,
#Deleted in new
chr3	186454981	186456036	chr3:186454981-186456036	0	-	186454981	186454981	8553170	3	193,126,49,	0,666,1006,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	186454990	186493661	chr3:186454990-186493661	3	-	186454990	186454990	5263520	8	184,338,58,441,290,239,179,556,	0,445,997,1173,2350,23172,37121,38115,
#Partially deleted in new
chr3	186455538	186457405	chr3:186455538-186457405	0	-	186455538	186455538	8553170	5	109,52,58,150,65,	0,183,449,858,1802,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	186476726	186478370	chr3:186476726-186478370	3	+	186476726	186476726	8553170	2	404,286,	0,1358,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	186538440	186546702	chr3:186538440-186546702	3	-	186538695	186544326	0	4	528,243,50,311,	0,914,5865,7951,
#Deleted in new
chr3	186538598	186544451	chr3:186538598-186544451	1	-	186538695	186544326	0	3	370,243,146,	0,756,5707,
#Deleted in new
chr3	186538598	186540520	chr3:186538598-186540520	0	-	186538598	186538598	8553170	2	370,1166,	0,756,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	186546072	186570543	chr3:186546072-186570543	3	-	186551149	186564329	789624	8	883,151,498,187,367,156,379,437,	0,5056,8181,8825,10336,12344,17921,24034,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	186546338	186567352	chr3:186546338-186567352	1	-	186551149	186564329	789624	8	617,151,498,187,367,156,379,86,	0,4790,7915,8559,10070,12078,17655,20928,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	186546340	186570318	chr3:186546340-186570318	1	-	186551149	186570154	789624	7	615,151,498,187,367,156,212,	0,4788,7913,8557,10068,12076,23766,
#Partially deleted in new
chr3	186553342	186554475	chr3:186553342-186554475	0	-	186553342	186553342	8553170	2	261,222,	0,911,
#Partially deleted in new
chr3	186556589	186570543	chr3:186556589-186570543	0	-	186556589	186564329	789624	4	186,156,379,437,	0,1827,7404,13517,
#Partially deleted in new
chr3	186558416	186564345	chr3:186558416-186564345	0	-	186558416	186564329	789624	2	108,352,	0,5577,
#Partially deleted in new
chr3	186567402	186585800	chr3:186567402-186585800	3	+	186570897	186585408	789624	11	194,803,157,98,133,143,83,58,112,160,457,	0,2760,4692,8437,10265,13968,14592,15313,16462,17027,17941,
#Partially deleted in new
chr3	186570677	186585799	chr3:186570677-186585799	1	+	186570897	186585408	789624	10	288,157,98,133,143,83,58,112,160,456,	0,1417,5162,6990,10693,11317,12038,13187,13752,14666,
#Partially deleted in new
chr3	186572103	186578060	chr3:186572103-186578060	0	+	186572103	186572103	8553170	3	148,98,393,	0,3736,5564,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	186578297	186585793	chr3:186578297-186585793	0	+	186578297	186578297	8553170	6	3216,83,58,112,160,450,	0,3697,4418,5567,6132,7046,
#Partially deleted in new
chr3	186579475	186743837	chr3:186579475-186743837	0	-	186579475	186579475	8553170	3	491,103,135,	0,138991,164227,
#Partially deleted in new
chr3	186579830	186743812	chr3:186579830-186743812	0	-	186579830	186579830	8553170	4	141,175,103,110,	0,62123,138636,163872,
#Partially deleted in new
chr3	186581994	186597103	chr3:186581994-186597103	3	+	186581994	186597103	789624	6	83,58,112,160,38,50,	0,721,1870,2435,3349,15059,
#Deleted in new
chr3	186596975	186597200	chr3:186596975-186597200	7	+	186596975	186596975	16724991	1	225,	0,
#Partially deleted in new
chr3	186606029	186743813	chr3:186606029-186743813	0	-	186606029	186606029	8553170	4	280,175,103,111,	0,35924,112437,137673,
#Partially deleted in new
chr3	186612922	186621318	chr3:186612922-186621318	3	+	186613141	186620930	789624	7	432,111,85,164,102,84,733,	0,2762,3520,4264,5613,6934,7663,
#Partially deleted in new
chr3	186613065	186621300	chr3:186613065-186621300	1	+	186613141	186620930	789624	7	289,111,85,167,102,84,715,	0,2619,3377,4118,5470,6791,7520,
#Partially deleted in new
chr3	186613084	186617989	chr3:186613084-186617989	0	+	186613084	186613084	8553170	4	270,111,85,803,	0,2600,3358,4102,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	186629935	186630211	chr3:186629935-186630211	3	-	186629935	186629935	8553170	1	276,	0,
#Partially deleted in new
chr3	186635968	186651276	chr3:186635968-186651276	0	+	186644770	186651276	789624	4	260,170,102,59,	0,8782,10279,15249,
#Partially deleted in new
chr3	186635968	186652631	chr3:186635968-186652631	3	+	186640460	186652631	789624	8	260,226,111,88,170,102,84,369,	0,4491,5061,6502,8782,10279,15249,16294,
#Partially deleted in new
chr3	186640359	186653008	chr3:186640359-186653008	1	+	186640460	186652631	789624	7	326,111,88,170,102,84,746,	0,670,2111,4391,5888,10858,11903,
#Partially deleted in new
chr3	186640359	186652631	chr3:186640359-186652631	1	+	186640460	186652631	789624	5	330,170,102,84,369,	0,4391,5888,10858,11903,
#Partially deleted in new
chr3	186640391	186653141	chr3:186640391-186653141	0	+	186640460	186644774	789624	6	294,111,170,102,84,879,	0,638,4359,5856,10826,11871,
#Partially deleted in new
chr3	186640406	186652985	chr3:186640406-186652985	0	+	186640460	186641079	789624	7	283,111,88,170,102,84,723,	0,623,2064,4344,5841,10811,11856,
#Partially deleted in new
chr3	186640440	186644912	chr3:186640440-186644912	0	+	186640440	186640440	8553170	2	245,162,	0,4310,
#Partially deleted in new
chr3	186640458	186652631	chr3:186640458-186652631	1	+	186640460	186652631	789624	6	227,88,170,102,84,369,	0,2012,4292,5789,10759,11804,
#Partially deleted in new
chr3	186641509	186665707	chr3:186641509-186665707	1	-	186641509	186641509	8553170	3	114,175,245,	0,444,23953,
#Partially deleted in new
chr3	186641514	186665703	chr3:186641514-186665703	1	-	186641514	186641514	8553170	3	109,175,125,	0,439,24064,
#Partially deleted in new
chr3	186641520	186743813	chr3:186641520-186743813	0	-	186641520	186641520	8553170	7	103,175,136,85,62,103,111,	0,433,9673,9889,10289,76946,102182,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	186641534	186695982	chr3:186641534-186695982	1	-	186641534	186641534	8553170	7	89,175,74,121,136,85,141,	0,419,686,5507,9659,9875,54307,
#Partially deleted in new
chr3	186641538	186710567	chr3:186641538-186710567	1	-	186641538	186641538	8553170	7	85,175,74,136,85,62,50,	0,415,682,9655,9871,10271,68979,
#Partially deleted in new
chr3	186641554	186743813	chr3:186641554-186743813	2	-	186641554	186641554	8553170	5	69,175,74,103,111,	0,399,666,76912,102148,
#Partially deleted in new
chr3	186641574	186743813	chr3:186641574-186743813	0	-	186641574	186641574	8553170	4	49,175,103,111,	0,379,76892,102128,
#Partially deleted in new
chr3	186642275	186743813	chr3:186642275-186743813	0	-	186642275	186642275	8553170	7	19,136,85,62,103,125,111,	0,8918,9134,9534,76191,78944,101427,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	186647112	186743756	chr3:186647112-186743756	1	-	186647112	186647112	8553170	6	50,136,85,62,103,54,	0,4081,4297,4697,71354,96590,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	186647118	186743813	chr3:186647118-186743813	0	-	186647118	186647118	8553170	7	44,136,85,62,103,112,111,	0,4075,4291,4691,71348,89420,96584,
#Partially deleted in new
chr3	186651192	186743813	chr3:186651192-186743813	0	-	186651192	186651192	8553170	6	137,85,62,119,103,111,	0,217,617,63547,67274,92510,
#Partially deleted in new
chr3	186651253	186743813	chr3:186651253-186743813	0	-	186651253	186651253	8553170	7	76,85,62,92,103,112,111,	0,156,556,63194,67213,85285,92449,
#Partially deleted in new
chr3	186651811	186718504	chr3:186651811-186718504	1	-	186651811	186651811	8553170	4	60,92,66,38,	0,22186,65745,66655,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	186660215	186666181	chr3:186660215-186666181	0	+	186660215	186660215	8553170	3	352,122,108,	0,4876,5858,
#Partially deleted in new
chr3	186665951	186678240	chr3:186665951-186678240	3	+	186666031	186677883	789624	7	263,117,91,167,81,102,1194,	0,2983,3986,5671,6835,9137,11095,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	186666930	186674518	chr3:186666930-186674518	1	-	186666930	186666930	8553170	4	331,132,92,37,	0,1981,7067,7551,
#Partially deleted in new
chr3	186668640	186703106	chr3:186668640-186703106	1	-	186668640	186668640	8553170	4	172,132,132,36,	0,271,27201,34430,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	186668977	186678231	chr3:186668977-186678231	0	+	186668977	186668977	8553170	5	74,442,167,2404,1185,	0,609,2645,3809,8069,
#Partially deleted in new
chr3	186674650	186743813	chr3:186674650-186743813	0	-	186674650	186674650	8553170	3	209,103,111,	0,43816,69052,
#Partially deleted in new
chr3	186674723	186743813	chr3:186674723-186743813	0	-	186674723	186674723	8553170	4	136,119,103,111,	0,40016,43743,68979,
#Partially deleted in new
chr3	186687328	186692506	chr3:186687328-186692506	7	+	186687328	186687328	16724991	4	103,104,171,966,	0,1011,2597,4212,
#Partially deleted in new
chr3	186698519	186708574	chr3:186698519-186708574	7	+	186698519	186698519	16724991	6	95,87,166,81,100,316,	0,2295,3571,4742,8099,9739,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	186711167	186743813	chr3:186711167-186743813	0	-	186711167	186711167	8553170	4	166,210,103,111,	0,3572,7299,32535,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	186714447	186746130	chr3:186714447-186746130	1	-	186714447	186714447	8553170	7	92,103,122,112,139,120,54,	0,4019,20265,22091,29255,31282,31629,
#Partially deleted in new
chr3	186717248	186757668	chr3:186717248-186757668	1	-	186717248	186717248	8553170	6	174,66,103,197,139,60,	0,308,1218,3971,26454,40360,
#Partially deleted in new
chr3	186717275	186744410	chr3:186717275-186744410	3	+	186717542	186743785	0	11	462,111,85,173,108,85,173,108,87,78,706,	0,2829,5161,7812,9961,14269,15226,21823,22052,24246,26429,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	186717328	186743948	chr3:186717328-186743948	1	+	186717542	186742331	0	10	409,111,85,173,108,85,173,108,87,2427,	0,2776,5108,7759,9908,14216,15173,21770,21999,24193,
#Partially deleted in new
chr3	186717347	186743805	chr3:186717347-186743805	1	+	186717542	186743785	0	10	390,111,85,173,85,173,108,87,78,101,	0,2757,5089,7740,14197,15154,21751,21980,24174,26357,
#Partially deleted in new
chr3	186717358	186744410	chr3:186717358-186744410	1	+	186717542	186743785	0	11	379,111,85,173,108,85,173,108,87,78,706,	0,2746,5078,7729,9878,14186,15143,21740,21969,24163,26346,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	186717358	186744410	chr3:186717358-186744410	1	+	186717542	186742331	0	10	379,111,85,173,108,85,173,108,87,2889,	0,2746,5078,7729,9878,14186,15143,21740,21969,24163,
#Partially deleted in new
chr3	186717399	186720609	chr3:186717399-186720609	0	+	186717399	186717399	8553170	2	338,505,	0,2705,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	186717697	186743837	chr3:186717697-186743837	0	-	186717697	186717697	8553170	3	872,122,135,	0,17015,26005,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	186718517	186743837	chr3:186718517-186743837	0	-	186718517	186718517	8553170	4	52,197,347,135,	0,2702,3225,25185,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	186728350	186743813	chr3:186728350-186743813	0	-	186728350	186728350	8553170	2	382,264,	0,15199,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	186728354	186743837	chr3:186728354-186743837	0	-	186728354	186728354	8553170	2	651,135,	0,15348,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	186728566	186743813	chr3:186728566-186743813	0	-	186728566	186728566	8553170	3	439,112,111,	0,7972,15136,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	186728677	186743813	chr3:186728677-186743813	0	-	186728677	186728677	8553170	4	328,122,112,111,	0,6035,7861,15025,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	186734629	186743813	chr3:186734629-186743813	0	-	186734629	186734629	8553170	3	205,112,111,	0,1909,9073,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	186735848	186743837	chr3:186735848-186743837	0	-	186735848	186735848	8553170	2	802,135,	0,7854,
#Partially deleted in new
chr3	186736239	186743813	chr3:186736239-186743813	0	-	186736239	186736239	8553170	2	411,187,	0,7387,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	186736415	186743837	chr3:186736415-186743837	0	-	186736415	186736415	8553170	3	235,137,135,	0,331,7287,
#Partially deleted in new
chr3	186736506	186743837	chr3:186736506-186743837	0	-	186736506	186736506	8553170	3	144,177,135,	0,5566,7196,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	186738316	186743791	chr3:186738316-186743791	0	-	186738316	186738316	8553170	2	527,89,	0,5386,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	186743702	186757727	chr3:186743702-186757727	0	-	186743702	186743702	8553170	2	139,711,	0,13314,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	186743704	186753755	chr3:186743704-186753755	0	-	186743704	186743704	8553170	3	137,93,431,	0,1405,9620,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	186743707	186759268	chr3:186743707-186759268	0	-	186743707	186743707	8553170	3	134,122,514,	0,2991,15047,
#Partially deleted in new
chr3	186743723	186753464	chr3:186743723-186753464	0	-	186743723	186743723	8553170	2	118,140,	0,9601,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	186743723	186745835	chr3:186743723-186745835	0	-	186743723	186743723	8553170	2	118,221,	0,1891,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	186743723	186757519	chr3:186743723-186757519	0	-	186743723	186743723	8553170	3	118,122,503,	0,2975,13293,
#Partially deleted in new
chr3	186743723	186772963	chr3:186743723-186772963	0	-	186743723	186743723	8553170	2	118,121,	0,29119,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	186743723	186760558	chr3:186743723-186760558	0	-	186743723	186743723	8553170	3	118,122,207,	0,2975,16628,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	186743723	186760558	chr3:186743723-186760558	0	-	186743723	186743723	8553170	2	118,207,	0,16628,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	186743723	186744866	chr3:186743723-186744866	0	-	186743723	186743723	8553170	2	118,269,	0,874,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	186757024	186760541	chr3:186757024-186760541	1	-	186757024	186757024	8553170	2	398,190,	0,3327,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	186760692	186762050	chr3:186760692-186762050	7	+	186760692	186760692	16724991	3	50,303,466,	0,321,892,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	186761013	186762050	chr3:186761013-186762050	5	+	186761013	186761013	16724991	2	303,611,	0,426,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	186761103	186761775	chr3:186761103-186761775	5	+	186761103	186761103	16724991	1	672,	0,
#Deleted in new
chr3	186771840	186771947	chr3:186771840-186771947	3	-	186771840	186771840	8553170	1	107,	0,
#Deleted in new
chr3	186772588	186773476	chr3:186772588-186773476	7	+	186772588	186772588	16724991	1	888,	0,
#Deleted in new
chr3	186781779	186784179	chr3:186781779-186784179	3	-	186781779	186781779	8553170	1	2400,	0,
#Deleted in new
chr3	186783204	186784659	chr3:186783204-186784659	0	+	186783610	186784659	789624	4	146,192,46,96,	0,243,1227,1359,
#Deleted in new
chr3	186783304	186785047	chr3:186783304-186785047	0	+	186783610	186785047	789624	4	335,46,133,86,	0,1127,1259,1657,
#Partially deleted in new
chr3	186783546	186789900	chr3:186783546-186789900	3	+	186783610	186789269	0	11	93,46,133,140,169,110,144,138,90,80,776,	0,885,1017,1415,2336,2617,2955,3580,3948,4256,5578,
#Partially deleted in new
chr3	186783571	186789897	chr3:186783571-186789897	0	+	186783610	186785965	789624	10	68,46,133,169,110,144,138,90,80,773,	0,860,992,2311,2592,2930,3555,3923,4231,5553,
#Deleted in new
chr3	186783574	186785042	chr3:186783574-186785042	0	+	186783574	186783574	8553170	2	65,611,	0,857,
#Partially deleted in new
chr3	186783576	186789881	chr3:186783576-186789881	0	+	186783610	186788319	789624	12	63,46,133,140,169,110,144,138,90,80,107,757,	0,855,987,1385,2306,2587,2925,3550,3918,4226,4733,5548,
#Partially deleted in new
chr3	186783576	186789140	chr3:186783576-186789140	0	+	186783610	186785965	789624	10	63,46,133,169,110,144,138,106,80,16,	0,855,987,2306,2587,2925,3550,3902,4226,5548,
#Partially deleted in new
chr3	186783576	186789897	chr3:186783576-186789897	1	+	186783610	186789269	0	11	63,49,133,140,169,110,144,138,90,80,773,	0,852,987,1385,2306,2587,2925,3550,3918,4226,5548,
#Deleted in new
chr3	186783576	186785297	chr3:186783576-186785297	0	+	186783576	186783576	8553170	4	63,46,133,336,	0,855,987,1385,
#Deleted in new
chr3	186783576	186785770	chr3:186783576-186785770	0	+	186783576	186783576	8553170	4	63,49,133,809,	0,852,987,1385,
#Deleted in new
chr3	186783576	186785041	chr3:186783576-186785041	0	+	186783576	186783576	8553170	3	63,49,478,	0,852,987,
#Deleted in new
chr3	186783576	186784944	chr3:186783576-186784944	0	+	186783576	186783576	8553170	2	63,516,	0,852,
#Deleted in new
chr3	186783576	186786216	chr3:186783576-186786216	0	+	186783576	186783576	8553170	4	63,46,133,334,	0,855,987,2306,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	186783577	186789894	chr3:186783577-186789894	0	+	186783577	186783577	8553170	4	62,46,1488,3731,	0,854,986,2586,
#Partially deleted in new
chr3	186783592	186787386	chr3:186783592-186787386	0	+	186783592	186783592	8553170	7	47,46,133,169,110,144,260,	0,839,971,2290,2571,2909,3534,
#Partially deleted in new
chr3	186783596	186789897	chr3:186783596-186789897	0	+	186783610	186785965	789624	10	43,49,133,169,110,144,138,90,80,773,	0,832,967,2286,2567,2905,3530,3898,4206,5528,
#Deleted in new
chr3	186784202	186786044	chr3:186784202-186786044	0	+	186784202	186784202	8553170	3	275,133,162,	0,361,1680,
#Deleted in new
chr3	186784202	186785913	chr3:186784202-186785913	0	+	186784453	186785913	789624	4	275,133,140,31,	0,361,759,1680,
#Deleted in new
chr3	186784795	186784864	chr3:186784795-186784864	3	+	186784795	186784795	789624	1	69,	0,
#Deleted in new
chr3	186785060	186786498	chr3:186785060-186786498	0	+	186785060	186785060	8553170	3	41,169,335,	0,822,1103,
#Partially deleted in new
chr3	186785961	186788368	chr3:186785961-186788368	0	+	186785961	186785961	8553170	5	90,110,144,138,874,	0,202,540,1165,1533,
#Partially deleted in new
chr3	186785994	186788256	chr3:186785994-186788256	0	+	186785994	186785994	8553170	6	57,110,144,138,90,454,	0,169,507,1132,1500,1808,
#Partially deleted in new
chr3	186786075	186787290	chr3:186786075-186787290	0	+	186786075	186786075	8553170	2	570,164,	0,1051,
#Deleted in new
chr3	186786322	186786445	chr3:186786322-186786445	3	+	186786322	186786322	8553170	1	123,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	186786490	186787522	chr3:186786490-186787522	0	+	186786490	186786490	8553170	2	774,28,	0,1004,
#Partially deleted in new
chr3	186786639	186788507	chr3:186786639-186788507	0	+	186786639	186786639	8553170	3	6,138,705,	0,487,1163,
#Deleted in new
chr3	186786671	186786777	chr3:186786671-186786777	3	+	186786671	186786671	5263520	1	106,	0,
#Deleted in new
chr3	186786674	186786852	chr3:186786674-186786852	3	+	186786674	186786674	789624	1	178,	0,
#Deleted in new
chr3	186787299	186787431	chr3:186787299-186787431	3	+	186787299	186787299	789624	1	132,	0,
#Deleted in new
chr3	186787313	186789291	chr3:186787313-186789291	0	+	186787313	186787313	8553170	4	271,80,111,167,	0,489,996,1811,
#Deleted in new
chr3	186787406	186788199	chr3:186787406-186788199	0	+	186787406	186787406	8553170	2	178,397,	0,396,
#Deleted in new
chr3	186787611	186787749	chr3:186787611-186787749	3	+	186787611	186787611	789624	1	138,	0,
#Deleted in new
chr3	186787775	186789477	chr3:186787775-186789477	0	+	186787775	186787775	8553170	2	107,353,	0,1349,
#Partially deleted in new
chr3	186789879	186804724	chr3:186789879-186804724	1	-	186789968	186804713	789624	9	185,114,126,121,144,120,80,79,142,	0,262,1845,2610,2924,4778,7655,11237,14703,
#Partially deleted in new
chr3	186789891	186794794	chr3:186789891-186794794	0	-	186789891	186789891	8553170	5	515,126,121,144,137,	0,1833,2598,2912,4766,
#Partially deleted in new
chr3	186789894	186806695	chr3:186789894-186806695	3	-	186789968	186804713	789624	11	170,114,81,126,121,144,120,80,79,142,271,	0,247,431,1830,2595,2909,4763,7640,11222,14688,16530,
#Partially deleted in new
chr3	186789899	186806501	chr3:186789899-186806501	1	-	186789968	186804713	789624	11	165,114,81,126,121,144,120,80,79,142,212,	0,242,426,1825,2590,2904,4758,7635,11217,14683,16390,
#Partially deleted in new
chr3	186789902	186791850	chr3:186789902-186791850	0	-	186790045	186791850	789624	4	158,114,81,126,	0,239,423,1822,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	186791322	186806468	chr3:186791322-186806468	0	-	186791322	186791322	8553170	8	528,121,144,120,80,79,142,179,	0,1167,1481,3335,6212,9794,13260,14967,
#Partially deleted in new
chr3	186791689	186794859	chr3:186791689-186794859	0	-	186791689	186791689	8553170	4	161,121,144,202,	0,800,1114,2968,
#Partially deleted in new
chr3	186792521	186806471	chr3:186792521-186806471	0	-	186792521	186804713	789624	7	89,144,120,80,79,142,47,	0,282,2136,5013,8595,12061,13903,
#Partially deleted in new
chr3	186792549	186806458	chr3:186792549-186806458	0	-	186794777	186804713	789624	7	61,144,124,80,79,142,169,	0,254,2108,4985,8567,12033,13740,
#Partially deleted in new
chr3	186792854	186806695	chr3:186792854-186806695	0	-	186792854	186804713	789624	6	93,120,80,79,142,271,	0,1803,4680,8262,11728,13570,
#Partially deleted in new
chr3	186794665	186801457	chr3:186794665-186801457	0	-	186794665	186794665	8553170	3	112,80,341,	0,2869,6451,
#Partially deleted in new
chr3	186794698	186806355	chr3:186794698-186806355	0	-	186794698	186804713	789624	6	79,80,79,142,39,66,	0,2836,6418,9884,10861,11591,
#Partially deleted in new
chr3	186797538	186804880	chr3:186797538-186804880	0	-	186797538	186804713	789624	3	76,79,298,	0,3578,7044,
#Partially deleted in new
chr3	186804582	186807058	chr3:186804582-186807058	0	-	186804582	186804713	789624	3	142,107,311,	0,1707,2165,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	186807691	186818121	chr3:186807691-186818121	3	+	186807691	186807691	8553170	2	195,345,	0,10085,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	186810879	186825521	chr3:186810879-186825521	3	-	186810879	186810879	789624	4	1269,77,271,215,	0,12665,13562,14427,
#Partially deleted in new
chr3	186826548	186827337	chr3:186826548-186827337	7	+	186826548	186826548	16724991	3	92,117,121,	0,479,668,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	186842689	186858463	chr3:186842689-186858463	3	+	186853058	186854704	0	3	60,222,4280,	0,10361,11494,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	186842703	186858463	chr3:186842703-186858463	1	+	186853058	186854704	0	4	46,51,222,4280,	0,2853,10347,11480,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	186851885	186856123	chr3:186851885-186856123	3	-	186851885	186851885	789624	3	1357,95,1991,	0,1892,2247,
#Partially deleted in new
chr3	186900197	186900557	chr3:186900197-186900557	7	+	186900197	186900197	16724991	1	360,	0,
#Deleted in new
chr3	186922285	186922753	chr3:186922285-186922753	7	-	186922285	186922285	16724991	1	468,	0,
#Partially deleted in new
chr3	186930484	187078553	chr3:186930484-187078553	3	+	187042703	187075803	0	8	350,142,132,657,98,99,175,2992,	0,33300,108257,112169,120764,142364,143674,145077,
#Partially deleted in new
chr3	186930501	186963887	chr3:186930501-186963887	0	+	186930501	186930501	8553170	3	333,80,103,	0,11846,33283,
#Partially deleted in new
chr3	186930525	187078553	chr3:186930525-187078553	1	+	187051334	187075803	0	7	309,142,132,98,99,175,2992,	0,33259,108216,120723,142323,143633,145036,
#Partially deleted in new
chr3	186930525	186963812	chr3:186930525-186963812	0	+	186930525	186930525	8553170	3	309,255,28,	0,18158,33259,
#Partially deleted in new
chr3	186930531	187072901	chr3:186930531-187072901	0	+	187051334	187072901	789624	4	303,142,98,53,	0,33253,120717,142317,
#Partially deleted in new
chr3	186930533	187074204	chr3:186930533-187074204	0	+	187051334	187074204	789624	4	301,98,99,46,	0,120715,142315,143625,
#Partially deleted in new
chr3	186930772	186964364	chr3:186930772-186964364	0	+	186930772	186930772	8553170	2	62,580,	0,33012,
#Partially deleted in new
chr3	186930778	187042780	chr3:186930778-187042780	0	+	187042703	187042780	789624	5	56,142,132,50,127,	0,33006,107963,111138,111875,
#Partially deleted in new
chr3	186931086	187042831	chr3:186931086-187042831	0	+	187042703	187042831	789624	4	52,142,132,178,	0,32698,107655,111567,
#Partially deleted in new
chr3	186931351	187043043	chr3:186931351-187043043	0	+	187042703	187043043	789624	4	43,142,132,390,	0,32433,107390,111302,
#Partially deleted in new
chr3	186974956	187042995	chr3:186974956-187042995	0	+	187042703	187042995	789624	3	134,132,342,	0,63785,67697,
#Partially deleted in new
chr3	186986315	187042998	chr3:186986315-187042998	0	+	187042703	187042998	789624	4	402,126,132,345,	0,10232,52426,56338,
#Partially deleted in new
chr3	186996621	187006551	chr3:186996621-187006551	0	+	186996621	186996621	8553170	2	52,410,	0,9520,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	187021855	187078553	chr3:187021855-187078553	1	+	187042703	187075803	0	7	149,132,657,98,99,175,2992,	0,16886,20798,29393,50993,52303,53706,
#Partially deleted in new
chr3	187024687	187042927	chr3:187024687-187042927	0	+	187042703	187042927	789624	3	171,132,274,	0,14054,17966,
#Partially deleted in new
chr3	187025478	187043084	chr3:187025478-187043084	0	+	187042703	187043084	789624	3	39,132,431,	0,13263,17175,
#Partially deleted in new
chr3	187043015	187075852	chr3:187043015-187075852	0	+	187043015	187072895	789624	6	295,98,97,99,175,291,	0,8233,21504,29833,31143,32546,
#Partially deleted in new
chr3	187043107	187051539	chr3:187043107-187051539	0	+	187043107	187043107	8553170	2	203,291,	0,8141,
#Partially deleted in new
chr3	187043742	187075622	chr3:187043742-187075622	0	+	187051334	187075622	789624	5	137,98,99,175,61,	0,7506,29106,30416,31819,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	187071973	187078551	chr3:187071973-187078551	0	+	187071973	187071973	8553170	3	974,929,2990,	0,1431,3588,
#Partially deleted in new
chr3	187120947	187139523	chr3:187120947-187139523	1	-	187121144	187121300	789624	3	381,64,311,	0,7051,18265,
#Partially deleted in new
chr3	187120947	187139484	chr3:187120947-187139484	1	-	187121144	187121300	789624	2	381,272,	0,18265,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	187197089	187207629	chr3:187197089-187207629	3	-	187197089	187197089	789624	5	941,176,886,327,344,	0,1437,2138,6430,10196,
#Partially deleted in new
chr3	187197485	187201465	chr3:187197485-187201465	3	+	187197515	187200070	789624	2	302,1915,	0,2065,
#Partially deleted in new
chr3	187217284	187292022	chr3:187217284-187292022	3	-	187220070	187291632	0	16	2977,100,68,186,114,138,75,138,79,119,148,197,132,178,232,395,	0,3750,5842,8039,9122,12475,24196,26199,32966,34349,35883,39379,43456,45258,68540,74343,
#Partially deleted in new
chr3	187226226	187243585	chr3:187226226-187243585	0	-	187226226	187226226	8553170	5	69,114,138,75,102,	0,180,3533,15254,17257,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	187234081	187291858	chr3:187234081-187291858	1	-	187235683	187291632	0	11	2486,75,138,79,119,148,197,132,178,232,231,	0,7399,9402,16169,17552,19086,22582,26659,28461,51743,57546,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	187234081	187244976	chr3:187234081-187244976	0	-	187234081	187234081	8553170	2	2486,3496,	0,7399,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	187234083	187291977	chr3:187234083-187291977	1	-	187235683	187262618	0	10	2484,75,138,79,119,148,197,132,178,350,	0,7397,9400,16167,17550,19084,22580,26657,28459,57544,
#Partially deleted in new
chr3	187235866	187291754	chr3:187235866-187291754	0	-	187235866	187235866	8553170	2	521,66,	0,55822,
#Partially deleted in new
chr3	187246360	187291957	chr3:187246360-187291957	1	-	187247332	187291632	0	9	1025,79,119,148,197,132,178,232,330,	0,3890,5273,6807,10303,14380,16182,39464,45267,
#Partially deleted in new
chr3	187247158	187291882	chr3:187247158-187291882	1	-	187247332	187285983	789624	10	227,79,119,148,197,132,178,232,106,255,	0,3092,4475,6009,9505,13582,15384,38666,44086,44469,
#Deleted in new
chr3	187251376	187253201	chr3:187251376-187253201	0	-	187251376	187251376	8553170	2	376,34,	0,1791,
#Partially deleted in new
chr3	187256584	187286008	chr3:187256584-187286008	0	-	187256584	187256584	8553170	4	276,132,178,184,	0,4156,5958,29240,
#Partially deleted in new
chr3	187256799	187263256	chr3:187256799-187263256	0	-	187256799	187256799	8553170	4	61,132,178,192,	0,3941,5743,6265,
#Partially deleted in new
chr3	187256814	187291980	chr3:187256814-187291980	0	-	187256814	187291632	789624	5	46,132,178,253,353,	0,3926,5728,29010,34813,
#Partially deleted in new
chr3	187260769	187276821	chr3:187260769-187276821	0	-	187260769	187260769	8553170	3	103,178,229,	0,1773,15823,
#Partially deleted in new
chr3	187262680	187291958	chr3:187262680-187291958	0	-	187262680	187291771	789624	3	40,232,270,	0,23144,29008,
#Partially deleted in new
chr3	187262713	187291697	chr3:187262713-187291697	0	-	187262713	187285983	789624	4	7,232,244,70,	0,23111,28531,28914,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	187291271	187297933	chr3:187291271-187297933	3	+	187291271	187291271	789624	2	265,1708,	0,4954,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	187368331	187372076	chr3:187368331-187372076	3	+	187368441	187371373	789624	2	265,1289,	0,2456,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	187383100	187384849	chr3:187383100-187384849	3	+	187383100	187383100	8553170	1	1749,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	187423314	187423419	chr3:187423314-187423419	3	+	187423314	187423314	8553170	1	105,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	187448844	187449450	chr3:187448844-187449450	3	+	187448844	187448844	8553170	2	46,200,	0,406,
#Deleted in new
chr3	187668905	187670399	chr3:187668905-187670399	3	-	187669064	187670291	0	2	372,246,	0,1248,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	187698258	187702557	chr3:187698258-187702557	3	-	187698497	187702128	789624	2	753,593,	0,3706,
#Partially deleted in new
chr3	187702312	187733849	chr3:187702312-187733849	3	+	187702312	187702312	8553170	3	227,119,326,	0,13309,31211,
#Partially deleted in new
chr3	187702365	187732415	chr3:187702365-187732415	0	+	187702365	187702365	789624	3	174,119,45,	0,13256,30005,
#Partially deleted in new
chr3	187721376	187745727	chr3:187721376-187745727	3	-	187722457	187733693	0	10	1225,138,131,168,185,972,222,171,39,318,	0,3564,4122,5354,6983,7673,10332,12156,13492,24033,
#Partially deleted in new
chr3	187721376	187745725	chr3:187721376-187745725	1	-	187722457	187733693	0	9	1225,138,131,185,972,222,171,39,316,	0,3564,4122,6983,7673,10332,12156,13492,24033,
#Partially deleted in new
chr3	187721386	187737088	chr3:187721386-187737088	0	-	187731861	187733693	789624	10	1215,138,131,168,185,972,160,171,39,999,	0,3554,4112,5344,6973,7663,10322,12146,13482,14703,
#Partially deleted in new
chr3	187722397	187736569	chr3:187722397-187736569	1	-	187722457	187733693	0	10	204,138,131,168,185,972,222,171,39,480,	0,2543,3101,4333,5962,6652,9311,11135,12471,13692,
#Partially deleted in new
chr3	187722431	187734882	chr3:187722431-187734882	1	-	187722457	187733693	0	8	170,138,131,185,972,222,171,14,	0,2509,3067,5928,6618,9277,11101,12437,
#Deleted in new
chr3	187724568	187725623	chr3:187724568-187725623	0	-	187724568	187724568	8553170	2	510,125,	0,930,
#Partially deleted in new
chr3	187731726	187734947	chr3:187731726-187734947	0	-	187731726	187733693	789624	3	204,171,79,	0,1806,3142,
#Partially deleted in new
chr3	187731764	187745437	chr3:187731764-187745437	0	-	187731764	187731764	8553170	4	104,171,39,28,	0,1768,3104,13645,
#Partially deleted in new
chr3	187731779	187737944	chr3:187731779-187737944	0	-	187731779	187733693	789624	4	151,171,39,348,	0,1753,3089,5817,
#Deleted in new
chr3	187734444	187745472	chr3:187734444-187745472	0	-	187734444	187734444	8553170	2	463,63,	0,10965,
#Deleted in new
chr3	187736186	187745459	chr3:187736186-187745459	0	-	187736186	187736186	8553170	2	1088,50,	0,9223,
#Deleted in new
chr3	187743685	187746028	chr3:187743685-187746028	3	+	187743685	187743685	8553170	2	359,785,	0,1558,
#Partially deleted in new
chr3	187796186	187805258	chr3:187796186-187805258	0	+	187796186	187796186	8553170	2	177,431,	0,8641,
#Partially deleted in new
chr3	187796254	187805137	chr3:187796254-187805137	3	+	187796254	187796254	8553170	3	109,170,310,	0,7962,8573,
#Partially deleted in new
chr3	187932763	187946221	chr3:187932763-187946221	3	-	187932763	187932763	8553170	2	69,84,	0,13374,
#Partially deleted in new
chr3	187958774	187966967	chr3:187958774-187966967	0	-	187958774	187958774	8553170	2	189,239,	0,7954,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	187965767	187976407	chr3:187965767-187976407	3	-	187965767	187965767	789624	2	1442,82,	0,10558,
#Partially deleted in new
chr3	187997421	188003990	chr3:187997421-188003990	3	-	187997421	187997421	8553170	2	337,90,	0,6479,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	188001699	188003406	chr3:188001699-188003406	3	-	188001699	188001699	8553170	2	880,128,	0,1579,
#Partially deleted in new
chr3	188107095	188147020	chr3:188107095-188147020	3	+	188107095	188107095	8553170	2	241,455,	0,39470,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	188151205	188154057	chr3:188151205-188154057	3	-	188151205	188151205	789624	1	2852,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	188153283	188712842	chr3:188153283-188712842	1	+	188406120	188708440	789624	7	80,57,202,113,123,684,4576,	0,188379,252828,331308,371381,455877,554983,
#Partially deleted in new
chr3	188153871	188609184	chr3:188153871-188609184	0	+	188406120	188609184	789624	5	150,202,113,123,24,	0,252240,330720,370793,455289,
#Partially deleted in new
chr3	188153930	188484677	chr3:188153930-188484677	0	+	188406120	188484677	789624	4	91,123,202,86,	0,71474,252181,330661,
#Partially deleted in new
chr3	188153941	188484595	chr3:188153941-188484595	0	+	188406120	188484595	789624	4	80,57,202,4,	0,187721,252170,330650,
#Deleted in new
chr3	188178542	188180812	chr3:188178542-188180812	3	+	188178542	188178542	789624	1	2270,	0,
#Partially deleted in new
chr3	188208197	188484597	chr3:188208197-188484597	0	+	188406120	188484597	789624	4	121,57,202,6,	0,133465,197914,276394,
#Partially deleted in new
chr3	188212640	188524693	chr3:188212640-188524693	0	+	188406120	188524693	789624	4	191,202,113,29,	0,193471,271951,312024,
#Partially deleted in new
chr3	188212703	188406260	chr3:188212703-188406260	0	+	188406120	188406260	789624	3	128,123,149,	0,12701,193408,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	188212932	188890671	chr3:188212932-188890671	1	+	188406186	188874479	789624	11	114,123,202,113,123,684,127,170,179,121,16321,	0,12472,193179,271659,311732,396228,495334,547180,653267,659710,661418,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	188212932	188890671	chr3:188212932-188890671	3	+	188406120	188874479	789624	11	114,123,202,113,123,684,127,170,179,121,16321,	0,12472,193179,271659,311732,396228,495334,547180,653267,659710,661418,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	188225404	188890671	chr3:188225404-188890671	1	+	188406120	188874479	789624	11	123,57,202,113,123,684,127,170,179,121,16321,	0,116258,180707,259187,299260,383756,482862,534708,640795,647238,648946,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	188239863	188406291	chr3:188239863-188406291	0	+	188406120	188406291	789624	2	299,180,	0,166248,
#Partially deleted in new
chr3	188341662	188609279	chr3:188341662-188609279	0	+	188341662	188341662	8553170	4	57,113,123,119,	0,142929,183002,267498,
#Partially deleted in new
chr3	188472572	188524787	chr3:188472572-188524787	0	+	188472572	188472572	8553170	3	263,113,123,	0,12019,52092,
#Partially deleted in new
chr3	188484589	188554101	chr3:188484589-188554101	0	+	188484589	188484589	8553170	3	115,123,340,	0,40075,69172,
#Deleted in new
chr3	188562237	188568666	chr3:188562237-188568666	3	-	188562237	188562237	789624	2	202,292,	0,6137,
#Partially deleted in new
chr3	188568149	188609551	chr3:188568149-188609551	0	+	188568149	188568149	8553170	2	173,391,	0,41011,
#Partially deleted in new
chr3	188569030	188760201	chr3:188569030-188760201	0	+	188569030	188569030	8553170	4	98,684,127,89,	0,40130,139236,191082,
#Partially deleted in new
chr3	188584346	188609606	chr3:188584346-188609606	0	+	188584346	188584346	8553170	2	136,446,	0,24814,
#Partially deleted in new
chr3	188609220	188746624	chr3:188609220-188746624	0	+	188609220	188746495	789624	3	624,127,137,	0,99046,137267,
#Deleted in new
chr3	188688780	188688866	chr3:188688780-188688866	3	+	188688780	188688780	5263520	1	86,	0,
#Partially deleted in new
chr3	188725267	188746618	chr3:188725267-188746618	0	+	188725267	188725267	8553170	2	237,131,	0,21220,
#Deleted in new
chr3	188743646	188746614	chr3:188743646-188746614	0	+	188743646	188743646	8553170	2	173,127,	0,2841,
#Partially deleted in new
chr3	188758738	188866309	chr3:188758738-188866309	0	+	188758738	188758738	8553170	4	30,238,170,110,	0,524,1374,107461,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	188941714	188947639	chr3:188941714-188947639	3	-	188941714	188941714	789624	2	336,361,	0,5564,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	188976753	189023814	chr3:188976753-189023814	0	+	188976753	188976753	8553170	4	117,138,218,65,	0,24020,27789,46996,
#Deleted in new
chr3	188989381	188990135	chr3:188989381-188990135	7	-	188989381	188989381	16724991	1	754,	0,
#Partially deleted in new
chr3	189100120	189215383	chr3:189100120-189215383	0	+	189207384	189215383	789624	7	84,154,299,64,217,219,92,	0,26936,32278,47463,50535,107255,115171,
#Partially deleted in new
chr3	189120246	189127166	chr3:189120246-189127166	0	+	189120246	189120246	8553170	4	141,200,122,110,	0,1415,3332,6810,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	189121285	189127198	chr3:189121285-189127198	0	+	189121285	189121285	8553170	3	86,122,142,	0,2293,5771,
#Partially deleted in new
chr3	189127057	189151136	chr3:189127057-189151136	0	+	189127057	189127057	8553170	5	153,299,64,150,233,	0,5341,20526,23598,23846,
#Partially deleted in new
chr3	189132563	189151118	chr3:189132563-189151118	0	+	189132563	189132563	8553170	2	134,463,	0,18092,
#Partially deleted in new
chr3	189132684	189151136	chr3:189132684-189151136	0	+	189132684	189132684	8553170	3	13,64,481,	0,14899,17971,
#Partially deleted in new
chr3	189150653	189219662	chr3:189150653-189219662	0	+	189150653	189150653	8553170	5	219,219,92,127,95,	0,56722,64638,67223,68914,
#Partially deleted in new
chr3	189171973	189325304	chr3:189171973-189325304	1	+	189207384	189320820	789624	6	158,219,92,177,154,4679,	0,35402,43318,66759,138412,148652,
#Partially deleted in new
chr3	189207373	189219665	chr3:189207373-189219665	0	+	189207384	189219665	789624	3	221,92,98,	0,7918,12194,
#Deleted in new
chr3	189207375	189212212	chr3:189207375-189212212	0	+	189207375	189207375	8553170	2	219,578,	0,4259,
#Partially deleted in new
chr3	189215299	189315693	chr3:189215299-189315693	0	+	189215299	189315528	789624	4	84,177,154,201,	0,23433,95086,100193,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	189238685	189240594	chr3:189238685-189240594	3	-	189238685	189238685	5263520	3	271,110,98,	0,1591,1811,
#Partially deleted in new
chr3	189267595	189320704	chr3:189267595-189320704	0	+	189267595	189267595	8553170	4	129,154,122,79,	0,42790,45475,53030,
#Partially deleted in new
chr3	189309893	189315595	chr3:189309893-189315595	0	+	189309893	189309893	8553170	3	284,154,103,	0,492,5599,
#Partially deleted in new
chr3	189631415	189738896	chr3:189631415-189738896	0	+	189631415	189631415	8553170	3	162,129,255,	0,106324,107226,
#Partially deleted in new
chr3	189631426	189897279	chr3:189631426-189897279	3	+	189631515	189894502	0	14	151,129,133,255,187,116,110,137,83,137,158,145,94,3074,	0,106313,107215,176845,232805,235255,236406,237153,237897,241432,254967,257913,259362,262779,
#Partially deleted in new
chr3	189631487	189894702	chr3:189631487-189894702	1	+	189631515	189894231	0	12	90,129,133,255,187,116,110,137,83,137,158,497,	0,106252,107154,176784,232744,235194,236345,237092,237836,241371,254906,262718,
#Partially deleted in new
chr3	189631487	189881496	chr3:189631487-189881496	1	+	189631515	189880178	0	11	90,129,133,255,187,116,110,137,83,137,1433,	0,106252,107154,176784,232744,235194,236345,237092,237836,241371,248576,
#Partially deleted in new
chr3	189631515	189894221	chr3:189631515-189894221	1	+	189631515	189894221	0	13	62,129,133,255,187,116,110,137,83,137,158,145,16,	0,106224,107126,176756,232716,235166,236317,237064,237808,241343,254878,257824,262690,
#Partially deleted in new
chr3	189631515	189894502	chr3:189631515-189894502	1	+	189631515	189894502	0	14	62,129,133,255,187,116,110,125,83,137,158,145,94,297,	0,106224,107126,176756,232716,235166,236317,237064,237808,241343,254878,257824,259273,262690,
#Deleted in new
chr3	189645326	189645466	chr3:189645326-189645466	7	-	189645326	189645326	16724991	1	140,	0,
#Partially deleted in new
chr3	189789659	189897268	chr3:189789659-189897268	1	+	189789800	189894502	0	12	183,255,187,116,110,137,83,137,158,145,94,3063,	0,18612,74572,77022,78173,78920,79664,83199,96734,99680,101129,104546,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	189789674	189864268	chr3:189789674-189864268	0	+	189789800	189864268	789624	4	168,255,216,37,	0,18597,54522,74557,
#Partially deleted in new
chr3	189789694	189873575	chr3:189789694-189873575	0	+	189789694	189789694	8553170	8	148,255,187,116,110,137,83,717,	0,18577,74537,76987,78138,78885,79629,83164,
#Partially deleted in new
chr3	189789800	189894231	chr3:189789800-189894231	1	+	189789800	189894231	0	10	42,255,187,116,110,137,83,137,158,26,	0,18471,74431,76881,78032,78779,79523,83058,96593,104405,
#Partially deleted in new
chr3	189789800	189894221	chr3:189789800-189894221	1	+	189789800	189894221	0	11	42,255,187,116,110,137,83,137,158,145,16,	0,18471,74431,76881,78032,78779,79523,83058,96593,99539,104405,
#Partially deleted in new
chr3	189789800	189881496	chr3:189789800-189881496	1	+	189789800	189880178	0	9	42,255,187,116,110,137,83,137,1433,	0,18471,74431,76881,78032,78779,79523,83058,90263,
#Partially deleted in new
chr3	189789800	189894502	chr3:189789800-189894502	1	+	189789800	189894502	0	11	42,187,116,110,137,83,137,158,145,94,297,	0,74431,76881,78032,78779,79523,83058,96593,99539,100988,104405,
#Partially deleted in new
chr3	189789800	189894502	chr3:189789800-189894502	1	+	189789800	189894502	0	12	42,255,187,116,110,125,83,137,158,145,94,297,	0,18471,74431,76881,78032,78779,79523,83058,96593,99539,100988,104405,
#Deleted in new
chr3	189829921	189830009	chr3:189829921-189830009	3	+	189829921	189829921	5263520	1	88,	0,
#Partially deleted in new
chr3	189956727	190120929	chr3:189956727-190120929	3	-	189957911	190120731	789624	15	1277,141,76,118,151,96,128,95,41,90,143,132,190,153,678,	0,7230,14088,15162,16146,17181,17830,26318,27822,30060,30799,32179,37366,38562,163524,
#Partially deleted in new
chr3	189956830	190122437	chr3:189956830-190122437	1	-	189957911	189995379	789624	15	1174,141,76,118,151,96,128,95,41,90,143,132,190,153,235,	0,7127,13985,15059,16043,17078,17727,26215,27719,29957,30696,32076,37263,38459,165372,
#Partially deleted in new
chr3	189957696	189964121	chr3:189957696-189964121	0	-	189957696	189957696	8553170	2	308,164,	0,6261,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	189963458	189971927	chr3:189963458-189971927	0	-	189963458	189963458	8553170	3	640,76,38,	0,7357,8431,
#Partially deleted in new
chr3	189964049	189973184	chr3:189964049-189973184	0	-	189964049	189964049	8553170	4	49,76,118,311,	0,6766,7840,8824,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	189969029	189969861	chr3:189969029-189969861	7	-	189969029	189969029	16724991	1	832,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	189971547	189974190	chr3:189971547-189974190	0	-	189971547	189971547	8553170	3	460,151,282,	0,1326,2361,
#Partially deleted in new
chr3	189974567	189987765	chr3:189974567-189987765	0	-	189974567	189974567	8553170	5	118,95,41,90,239,	0,8478,9982,12220,12959,
#Partially deleted in new
chr3	189974572	189983484	chr3:189974572-189983484	0	-	189974572	189974572	8553170	2	113,439,	0,8473,
#Partially deleted in new
chr3	189988906	190116648	chr3:189988906-190116648	0	-	189988906	189995379	789624	4	132,190,153,69,	0,5187,6383,127673,
#Partially deleted in new
chr3	189988914	190121678	chr3:189988914-190121678	0	-	189988914	189995379	789624	4	124,190,153,142,	0,5179,6375,132622,
#Duplicated in new
chr3	190120963	190144846	chr3:190120963-190144846	3	+	190120963	190120963	789624	4	126,147,216,241,	0,7965,22322,23642,
#Deleted in new
chr3	190165416	190165523	chr3:190165416-190165523	3	-	190165416	190165416	8553170	1	107,	0,
#Deleted in new
chr3	190166763	190167651	chr3:190166763-190167651	7	+	190166763	190166763	16724991	1	888,	0,
#Partially deleted in new
chr3	190305700	190322475	chr3:190305700-190322475	3	-	190308276	190322206	789624	4	2739,85,165,492,	0,4468,7171,16283,
#Partially deleted in new
chr3	190310168	190313218	chr3:190310168-190313218	0	-	190310168	190310168	8553170	2	85,347,	0,2703,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	190387871	190412143	chr3:190387871-190412143	3	+	190388119	190410036	789624	5	572,103,165,192,2241,	0,14465,16890,20442,22031,
#Partially deleted in new
chr3	190388119	190410008	chr3:190388119-190410008	1	+	190388119	190409938	789624	2	324,106,	0,21783,
#Partially deleted in new
chr3	190428654	190449876	chr3:190428654-190449876	3	-	190429594	190449809	789624	5	1077,146,45,38,142,	0,11589,12783,19135,21080,
#Partially deleted in new
chr3	190514050	190651519	chr3:190514050-190651519	3	+	190564289	190648705	0	11	169,65,286,187,166,72,127,149,150,144,3182,	0,50238,90077,94944,106224,109293,113272,115299,130197,131648,134287,
#Partially deleted in new
chr3	190514058	190651512	chr3:190514058-190651512	1	+	190564289	190648705	0	12	161,87,65,286,187,166,72,127,149,150,144,3175,	0,42071,50230,90069,94936,106216,109285,113264,115291,130189,131640,134279,
#Partially deleted in new
chr3	190514086	190604402	chr3:190514086-190604402	0	+	190564289	190604402	789624	4	133,61,65,275,	0,40546,50202,90041,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	190514095	190519030	chr3:190514095-190519030	0	+	190514095	190514095	8553170	2	124,522,	0,4413,
#Partially deleted in new
chr3	190514097	190630285	chr3:190514097-190630285	1	+	190564289	190629518	0	9	122,87,65,286,187,166,72,127,936,	0,42032,50191,90030,94897,106177,109246,113225,115252,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	190514101	190659750	chr3:190514101-190659750	1	+	190564289	190656607	0	12	118,87,65,286,187,166,72,127,149,150,144,3862,	0,42028,50187,90026,94893,106173,109242,113221,115248,130146,131597,141787,
#Partially deleted in new
chr3	190514101	190651512	chr3:190514101-190651512	0	+	190564289	190644386	0	10	118,65,286,187,166,72,127,150,144,3175,	0,50187,90026,94893,106173,109242,113221,130146,131597,134236,
#Partially deleted in new
chr3	190514101	190651512	chr3:190514101-190651512	0	+	190564289	190644386	0	11	118,87,65,286,187,166,72,127,150,144,3175,	0,42028,50187,90026,94893,106173,109242,113221,130146,131597,134236,
#Partially deleted in new
chr3	190514101	190630285	chr3:190514101-190630285	1	+	190564289	190629518	0	8	118,65,286,187,166,72,127,936,	0,50187,90026,94893,106173,109242,113221,115248,
#Partially deleted in new
chr3	190514101	190630244	chr3:190514101-190630244	1	+	190609067	190629518	789624	6	118,187,166,72,127,895,	0,94893,106173,109242,113221,115248,
#Partially deleted in new
chr3	190514107	190564517	chr3:190514107-190564517	0	+	190514107	190514107	8553170	3	112,87,229,	0,42022,50181,
#Partially deleted in new
chr3	190514118	190564668	chr3:190514118-190564668	0	+	190514118	190514118	8553170	2	101,380,	0,50170,
#Partially deleted in new
chr3	190516218	190520560	chr3:190516218-190520560	0	+	190516218	190516218	8553170	3	78,178,59,	0,1635,4283,
#Partially deleted in new
chr3	190555863	190564418	chr3:190555863-190564418	0	+	190555863	190555863	8553170	2	353,130,	0,8425,
#Partially deleted in new
chr3	190563445	190609079	chr3:190563445-190609079	0	+	190564289	190609079	789624	4	87,65,286,85,	0,843,40682,45549,
#Partially deleted in new
chr3	190563940	190651518	chr3:190563940-190651518	1	+	190564289	190648705	0	10	413,286,187,166,72,127,149,150,144,3181,	0,40187,45054,56334,59403,63382,65409,80307,81758,84397,
#Partially deleted in new
chr3	190564182	190657196	chr3:190564182-190657196	1	+	190564289	190656607	0	10	171,286,187,166,72,127,149,150,144,1308,	0,39945,44812,56092,59161,63140,65167,80065,81516,91706,
#Partially deleted in new
chr3	190615307	190629732	chr3:190615307-190629732	0	+	190615307	190629518	789624	5	47,166,72,127,383,	0,4967,8036,12015,14042,
#Deleted in new
chr3	190624594	190625169	chr3:190624594-190625169	7	+	190624594	190624594	16724991	1	575,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	190642162	190642503	chr3:190642162-190642503	3	+	190642162	190642162	8553170	1	341,	0,
#Deleted in new
chr3	190659215	190659750	chr3:190659215-190659750	3	+	190659215	190659215	8553170	1	535,	0,
#Deleted in new
chr3	190697922	190698848	chr3:190697922-190698848	3	-	190697922	190697922	8553170	2	228,298,	0,628,
#Partially deleted in new
chr3	190714810	190716399	chr3:190714810-190716399	7	+	190714810	190714810	16724991	1	1589,	0,
#Deleted in new
chr3	190830964	190832173	chr3:190830964-190832173	7	+	190830964	190830964	16724991	1	1209,	0,
#Deleted in new
chr3	190852876	190858060	chr3:190852876-190858060	0	-	190852876	190852876	8553170	2	3039,278,	0,4906,
#Deleted in new
chr3	190852877	190862615	chr3:190852877-190862615	3	-	190855294	190862615	0	5	3038,117,89,175,3,	0,4905,6050,7806,9735,
#Partially deleted in new
chr3	190855643	190892429	chr3:190855643-190892429	0	-	190855643	190855643	8553170	4	272,117,89,84,	0,2139,3284,36702,
#Deleted in new
chr3	190857789	190862676	chr3:190857789-190862676	0	-	190859805	190862615	789624	5	110,89,75,175,64,	0,1138,1955,2894,4823,
#Partially deleted in new
chr3	191199240	191265615	chr3:191199240-191265615	1	+	191212532	191262884	789624	4	67,102,215,2750,	0,13292,19506,63625,
#Partially deleted in new
chr3	191212532	191250121	chr3:191212532-191250121	3	+	191212532	191250121	789624	3	102,215,85,	0,6214,37504,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	191213290	191234605	chr3:191213290-191234605	3	-	191213290	191213290	789624	6	50,110,121,68,132,34,	0,3779,5525,15424,16475,21281,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	191267167	191330536	chr3:191267167-191330536	3	-	191268415	191282189	789624	9	1274,94,38,99,227,57,404,79,123,	0,8084,9639,10904,14919,37324,48868,61463,63246,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	191268040	191282331	chr3:191268040-191282331	0	-	191275301	191282189	789624	4	401,94,99,245,	0,7211,10031,14046,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	191268190	191282261	chr3:191268190-191282261	0	-	191273499	191282189	789624	6	251,179,94,38,99,175,	0,5195,7061,8616,9881,13896,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	191268313	191282403	chr3:191268313-191282403	1	-	191268415	191282189	789624	5	128,94,38,99,317,	0,6938,8493,9758,13773,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	191268336	191282310	chr3:191268336-191282310	0	-	191275301	191282189	789624	5	105,179,94,99,224,	0,5049,6915,9735,13750,
#Partially deleted in new
chr3	191277590	191316218	chr3:191277590-191316218	0	-	191277590	191277590	8553170	4	46,99,227,183,	0,481,4496,38445,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	191278159	191330473	chr3:191278159-191330473	0	-	191278159	191282189	789624	7	11,227,167,57,404,79,60,	0,3927,16400,26332,37876,50471,52254,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	191328230	191329616	chr3:191328230-191329616	0	-	191328230	191328230	8553170	4	225,79,169,239,	0,400,573,1147,
#Deleted in new
chr3	191328657	191329312	chr3:191328657-191329312	0	-	191328657	191328657	8553170	2	52,509,	0,146,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr3	191329076	191398670	chr3:191329076-191398670	3	+	191329674	191391760	789624	12	647,63,127,91,118,528,116,45,105,80,107,6930,	0,28011,28921,31992,40842,45985,51082,51610,51751,53669,60419,62664,
#Partially deleted in new
chr3	191329084	191392175	chr3:191329084-191392175	1	+	191329674	191391760	789624	11	639,63,127,91,118,116,45,105,80,107,435,	0,28003,28913,31984,40834,51074,51602,51743,53661,60411,62656,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	191361102	191370281	chr3:191361102-191370281	0	+	191361102	191361102	8553170	2	57,363,	0,8816,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	191425525	191591097	chr3:191425525-191591097	0	+	191425525	191425525	8553170	5	79,225,161,35,1195,	0,144074,147788,159802,164377,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	191425526	191591097	chr3:191425526-191591097	0	+	191425526	191425526	8553170	10	78,35,58,236,65,123,77,225,161,1195,	0,105289,106123,113767,120524,131735,134151,144073,147787,164376,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	191425527	191591097	chr3:191425527-191591097	3	+	191425527	191425527	8553170	7	77,138,123,73,225,161,1195,	0,48023,131734,134150,144072,147786,164375,
#Partially deleted in new
chr3	191461162	191461456	chr3:191461162-191461456	3	+	191461162	191461456	789624	1	294,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	191557323	191590356	chr3:191557323-191590356	0	+	191557323	191557323	8553170	4	61,225,161,454,	0,12276,15990,32579,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	191568534	191573509	chr3:191568534-191573509	0	+	191568534	191568534	8553170	3	73,225,196,	0,1065,4779,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	191641134	191641237	chr3:191641134-191641237	3	+	191641134	191641134	8553170	1	103,	0,
#Deleted in new
chr3	191952348	191952826	chr3:191952348-191952826	7	-	191952348	191952348	16724991	1	478,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	192029879	192036557	chr3:192029879-192036557	3	+	192029879	192029879	8553170	3	27,105,540,	0,2427,6138,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	192029879	192036242	chr3:192029879-192036242	0	+	192029879	192029879	8553170	3	160,105,225,	0,2427,6138,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	192032208	192036389	chr3:192032208-192036389	0	+	192032208	192032208	8553170	2	203,372,	0,3809,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	192093121	192093436	chr3:192093121-192093436	3	+	192093121	192093121	8553170	1	315,	0,
#Partially deleted in new
chr3	192139394	192727599	chr3:192139394-192727599	1	-	192144008	192727193	0	6	4733,199,104,111,143,116,	0,31063,195966,221033,587786,588089,
#Partially deleted in new
chr3	192142508	192409049	chr3:192142508-192409049	3	-	192144008	192408223	0	5	1619,199,104,111,1025,	0,27949,192852,217919,265516,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	192143598	192268749	chr3:192143598-192268749	0	-	192143598	192143598	8553170	3	529,199,99,	0,26859,125052,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	192143977	192767764	chr3:192143977-192767764	1	-	192144008	192727193	0	6	150,199,104,111,143,61,	0,26480,191383,216450,583203,623726,
#Partially deleted in new
chr3	192143987	192727500	chr3:192143987-192727500	1	-	192144008	192727193	789624	5	140,199,104,143,17,	0,26470,191373,583193,583496,
#Partially deleted in new
chr3	192144059	192727541	chr3:192144059-192727541	0	-	192144059	192360479	789624	5	68,199,104,111,58,	0,26398,191301,216368,583424,
#Partially deleted in new
chr3	192170563	192727525	chr3:192170563-192727525	0	-	192170563	192727193	789624	4	93,104,111,345,	0,164797,189864,556617,
#Partially deleted in new
chr3	192238036	192244987	chr3:192238036-192244987	1	+	192238036	192238036	8553170	3	285,97,173,	0,551,6778,
#Partially deleted in new
chr3	192238629	192283097	chr3:192238629-192283097	3	+	192238629	192238629	789624	5	55,170,137,118,100,	0,26617,28373,44167,44368,
#Partially deleted in new
chr3	192515021	192516573	chr3:192515021-192516573	3	+	192515021	192515021	789624	2	487,93,	0,1459,
#Partially deleted in new
chr3	192516830	192521398	chr3:192516830-192521398	3	+	192516830	192516830	8553170	2	181,110,	0,4458,
#Partially deleted in new
chr3	192672965	192727587	chr3:192672965-192727587	0	-	192672965	192672965	8553170	3	305,143,104,	0,54215,54518,
#Deleted in new
chr3	192726881	192727587	chr3:192726881-192727587	0	-	192726881	192726881	8553170	2	442,104,	0,602,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	192729554	192729716	chr3:192729554-192729716	3	-	192729554	192729554	8553170	1	162,	0,
#Partially deleted in new
chr3	192796814	192918161	chr3:192796814-192918161	3	-	192798385	192917840	789624	2	2836,532,	0,120815,
#Partially deleted in new
chr3	193144463	193176864	chr3:193144463-193176864	3	-	193144463	193144463	8553170	3	101,163,262,	0,24838,32139,
#Deleted in new
chr3	193155455	193157208	chr3:193155455-193157208	7	-	193155455	193155455	16724991	2	1508,33,	0,1720,
#Partially deleted in new
chr3	193241124	193270855	chr3:193241124-193270855	3	+	193241218	193270705	789624	4	409,139,266,252,	0,14526,21845,29479,
#Partially deleted in new
chr3	193263001	193277738	chr3:193263001-193277738	0	+	193263001	193270705	789624	3	234,161,103,	0,7602,14634,
#Partially deleted in new
chr3	193274789	193378843	chr3:193274789-193378843	3	-	193275041	193378725	789624	30	513,81,89,203,175,73,97,110,43,80,126,161,125,118,157,84,151,62,189,158,171,129,73,135,70,81,71,147,174,181,	0,1960,4576,10124,15095,24341,26421,30769,32537,35848,37026,39243,40182,44201,46891,47701,50074,52206,56333,58960,60139,69137,70213,76277,79337,87591,87777,88446,89317,103873,
#Partially deleted in new
chr3	193274795	193284948	chr3:193274795-193284948	1	-	193275041	193279371	789624	6	498,8,16,63,89,35,	0,499,1954,1972,4570,10118,
#Partially deleted in new
chr3	193274888	193313363	chr3:193274888-193313363	0	-	193274888	193274888	8553170	12	414,81,89,203,175,73,97,110,43,80,126,141,	0,1861,4477,10025,14996,24242,26322,30670,32438,35749,36927,38334,
#Partially deleted in new
chr3	193307243	193314362	chr3:193307243-193314362	3	+	193307243	193307243	789624	2	157,319,	0,6800,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	193312700	193324012	chr3:193312700-193324012	0	-	193312700	193312700	8553170	3	1493,84,803,	0,9790,10509,
#Partially deleted in new
chr3	193402077	193467348	chr3:193402077-193467348	0	-	193433847	193467348	789624	21	787,81,89,194,172,73,69,110,43,80,123,164,125,112,154,87,151,62,189,158,33,	0,5235,8904,10100,12501,31767,33598,36397,36945,38480,39388,40315,46128,52023,54922,55301,57003,60684,62862,63947,65238,
#Partially deleted in new
chr3	193402349	193554869	chr3:193402349-193554869	0	-	193502521	193554799	789624	28	515,81,89,194,172,73,97,110,43,80,123,164,125,112,154,87,151,62,189,158,171,135,70,81,71,47,174,130,	0,4963,8632,9828,12229,31495,33298,36125,36673,38208,39116,40043,45856,51751,54650,55029,56731,60412,62590,63675,64966,68509,81586,90567,90740,100143,112348,152390,
#Partially deleted in new
chr3	193402357	193555122	chr3:193402357-193555122	3	-	193402651	193554799	789624	30	507,81,89,194,172,73,97,110,43,80,123,164,125,112,154,87,151,62,189,158,171,135,70,135,70,81,71,147,174,383,	0,4955,8624,9820,12221,31487,33290,36117,36665,38200,39108,40035,45848,51743,54642,55021,56723,60404,62582,63667,64958,68501,81578,87372,88971,90559,90732,100135,112340,152382,
#Partially deleted in new
chr3	193402357	193554987	chr3:193402357-193554987	1	-	193402651	193554799	789624	30	507,81,89,194,172,73,97,110,43,80,123,164,125,112,154,87,151,62,189,101,171,135,70,135,70,81,71,147,174,248,	0,4955,8624,9820,12221,31487,33290,36117,36665,38200,39108,40035,45848,51743,54642,55021,56723,60404,62582,63724,64958,68501,81578,87372,88971,90559,90732,100135,112340,152382,
#Partially deleted in new
chr3	193402499	193412371	chr3:193402499-193412371	0	-	193402499	193402499	8553170	5	365,143,81,89,194,	0,1524,4813,8482,9678,
#Partially deleted in new
chr3	193433859	193439095	chr3:193433859-193439095	0	-	193433859	193433859	8553170	3	58,97,73,	0,1788,5163,
#Partially deleted in new
chr3	193438493	193442552	chr3:193438493-193442552	0	-	193440553	193442552	789624	5	91,43,148,123,160,	0,529,1996,2972,3899,
#Partially deleted in new
chr3	193440114	193554907	chr3:193440114-193554907	0	-	193440114	193440114	8553170	21	523,123,164,125,112,154,87,151,62,189,158,171,135,70,135,70,81,71,147,174,168,	0,1351,2278,8091,13986,16885,17264,18966,22647,24825,25910,27201,30744,43821,49615,51214,52802,52975,62378,74583,114625,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	193458597	193554799	chr3:193458597-193554799	1	-	193459023	193554799	789624	14	634,62,189,158,171,135,70,135,70,81,71,147,174,60,	0,4164,6342,7427,8718,12261,25338,31132,32731,34319,34492,43895,56100,96142,
#Partially deleted in new
chr3	193502544	193593111	chr3:193502544-193593111	0	-	193502544	193502544	8553170	4	95,174,200,91,	0,12153,79162,90476,
#Partially deleted in new
chr3	193553212	193555088	chr3:193553212-193555088	3	+	193553212	193553212	789624	2	75,319,	0,1557,
#Partially deleted in new
chr3	193553411	193554912	chr3:193553411-193554912	1	+	193553411	193553411	789624	3	93,61,641,	0,295,860,
#Partially deleted in new
chr3	193578811	193579413	chr3:193578811-193579413	5	-	193578811	193578811	16724991	1	602,	0,
#Partially deleted in new
chr3	193579000	193593090	chr3:193579000-193593090	7	-	193579000	193579000	16724991	3	465,200,70,	0,2706,14020,
#Partially deleted in new
chr3	193593143	193697810	chr3:193593143-193697810	1	+	193593377	193692127	789624	29	266,319,97,68,111,54,105,87,114,81,75,72,100,131,73,73,116,65,77,166,153,109,80,141,117,94,111,70,3205,	0,21579,22530,25725,32948,38468,42274,44051,44808,49621,49831,50229,50384,50831,52409,52584,53921,54926,55651,61718,63936,65743,66338,69678,71736,73152,74026,98919,101462,
#Partially deleted in new
chr3	193593143	193697811	chr3:193593143-193697811	1	+	193593377	193692127	789624	31	266,319,97,108,54,68,111,54,105,87,114,81,75,72,100,131,73,73,116,65,77,166,153,109,80,141,117,94,111,70,3206,	0,21579,22530,24034,24640,25725,32948,38468,42274,44051,44808,49621,49831,50229,50384,50831,52409,52584,53921,54926,55651,61718,63936,65743,66338,69678,71736,73152,74026,98919,101462,
#Partially deleted in new
chr3	193593143	193697810	chr3:193593143-193697810	1	+	193593377	193692127	789624	30	266,319,97,54,68,111,54,105,87,114,81,75,72,100,131,73,73,116,65,77,166,153,109,80,141,117,94,111,70,3205,	0,21579,22530,24640,25725,32948,38468,42274,44051,44808,49621,49831,50229,50384,50831,52409,52584,53921,54926,55651,61718,63936,65743,66338,69678,71736,73152,74026,98919,101462,
#Partially deleted in new
chr3	193593143	193697811	chr3:193593143-193697811	1	+	193593377	193692127	789624	29	266,319,97,108,68,54,105,87,114,81,75,72,100,131,73,73,116,65,77,166,153,109,80,141,117,94,111,70,3206,	0,21579,22530,24034,25725,38468,42274,44051,44808,49621,49831,50229,50384,50831,52409,52584,53921,54926,55651,61718,63936,65743,66338,69678,71736,73152,74026,98919,101462,
#Partially deleted in new
chr3	193593143	193697823	chr3:193593143-193697823	1	+	193593377	193692127	789624	29	266,319,97,108,68,54,105,87,114,81,75,72,100,131,73,73,116,65,77,166,153,109,80,141,117,94,111,70,3218,	0,21579,22530,24034,25725,38468,42274,44051,44808,49621,49831,50229,50384,50831,52409,52584,53921,54926,55651,61718,63936,65743,66338,69678,71736,73152,74026,98919,101462,
#Partially deleted in new
chr3	193593185	193697811	chr3:193593185-193697811	3	+	193593377	193692127	789624	30	224,319,97,108,68,111,54,105,87,114,81,75,72,100,131,73,73,116,65,77,166,153,109,80,141,117,94,111,70,3206,	0,21537,22488,23992,25683,32906,38426,42232,44009,44766,49579,49789,50187,50342,50789,52367,52542,53879,54884,55609,61676,63894,65701,66296,69636,71694,73110,73984,98877,101420,
#Partially deleted in new
chr3	193593215	193697384	chr3:193593215-193697384	0	+	193593377	193668415	789624	30	194,319,97,108,68,54,105,87,114,81,75,72,100,131,73,73,116,65,77,166,153,109,80,141,117,94,111,170,70,2779,	0,21507,22458,23962,25653,38396,42202,43979,44736,49549,49759,50157,50312,50759,52337,52512,53849,54854,55579,61646,63864,65671,66266,69606,71664,73080,73954,75099,98847,101390,
#Partially deleted in new
chr3	193593215	193696622	chr3:193593215-193696622	0	+	193593377	193689142	789624	30	194,319,97,108,68,54,105,87,114,81,75,72,100,131,73,73,116,65,77,166,153,109,80,141,117,94,111,102,70,2017,	0,21507,22458,23962,25653,38396,42202,43979,44736,49549,49759,50157,50312,50759,52337,52512,53849,54854,55579,61646,63864,65671,66266,69606,71664,73080,73954,95853,98847,101390,
#Partially deleted in new
chr3	193593215	193697283	chr3:193593215-193697283	0	+	193593377	193644061	789624	31	194,319,97,108,54,68,111,54,105,87,114,81,75,72,100,154,73,73,116,65,77,166,153,109,80,141,117,94,111,70,2678,	0,21507,22458,23962,24568,25653,32876,38396,42202,43979,44736,49549,49759,50157,50312,50736,52337,52512,53849,54854,55579,61646,63864,65671,66266,69606,71664,73080,73954,98847,101390,
#Partially deleted in new
chr3	193593216	193696583	chr3:193593216-193696583	0	+	193593377	193596887	789624	31	193,147,319,97,108,54,68,54,105,87,114,81,75,72,100,131,73,73,116,65,77,166,153,109,80,141,117,94,111,70,1978,	0,3583,21506,22457,23961,24567,25652,38395,42201,43978,44735,49548,49758,50156,50311,50758,52336,52511,53848,54853,55578,61645,63863,65670,66265,69605,71663,73079,73953,98846,101389,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr3	193593217	193696983	chr3:193593217-193696983	0	+	193615694	193646506	789624	31	192,58,319,97,108,68,54,105,87,114,81,75,72,100,131,73,73,95,116,65,77,166,153,109,80,141,117,94,111,70,2378,	0,10282,21505,22456,23960,25651,38394,42200,43977,44734,49547,49757,50155,50310,50757,52335,52510,53267,53847,54852,55577,61644,63862,65669,66264,69604,71662,73078,73952,98845,101388,
#Partially deleted in new
chr3	193593219	193668917	chr3:193593219-193668917	1	+	193593377	193668415	789624	28	190,319,97,108,68,54,105,87,114,81,75,72,100,131,73,73,116,65,77,166,153,109,80,141,117,94,111,603,	0,21503,22454,23958,25649,38392,42198,43975,44732,49545,49755,50153,50308,50755,52333,52508,53845,54850,55575,61642,63860,65667,66262,69602,71660,73076,73950,75095,
#Partially deleted in new
chr3	193593221	193695733	chr3:193593221-193695733	0	+	193593377	193628514	789624	30	188,319,97,108,68,108,54,105,87,114,81,75,72,100,131,73,73,116,65,77,166,153,109,80,141,117,94,111,70,1128,	0,21501,22452,23956,25647,35287,38390,42196,43973,44730,49543,49753,50151,50306,50753,52331,52506,53843,54848,55573,61640,63858,65665,66260,69600,71658,73074,73948,98841,101384,
#Partially deleted in new
chr3	193593227	193697523	chr3:193593227-193697523	1	+	193615694	193692127	789624	31	182,58,319,97,108,54,68,54,105,87,114,81,75,72,100,131,73,73,116,65,77,166,153,109,80,141,117,94,111,70,2918,	0,10272,21495,22446,23950,24556,25641,38384,42190,43967,44724,49537,49747,50145,50300,50747,52325,52500,53837,54842,55567,61634,63852,65659,66254,69594,71652,73068,73942,98835,101378,
#Partially deleted in new
chr3	193593246	193697524	chr3:193593246-193697524	1	+	193593377	193692127	789624	28	163,319,97,68,54,105,87,114,81,75,72,100,131,73,73,116,65,77,166,153,109,80,141,117,94,111,70,2919,	0,21476,22427,25622,38365,42171,43948,44705,49518,49728,50126,50281,50728,52306,52481,53818,54823,55548,61615,63833,65640,66235,69575,71633,73049,73923,98816,101359,
#Partially deleted in new
chr3	193593279	193695652	chr3:193593279-193695652	1	+	193593377	193692127	789624	30	130,319,97,108,54,68,54,105,87,114,81,75,72,100,131,73,73,116,65,77,166,153,109,80,141,117,94,111,70,1047,	0,21443,22394,23898,24504,25589,38332,42138,43915,44672,49485,49695,50093,50248,50695,52273,52448,53785,54790,55515,61582,63800,65607,66202,69542,71600,73016,73890,98783,101326,
#Partially deleted in new
chr3	193593280	193618937	chr3:193593280-193618937	0	+	193615694	193618937	789624	6	129,58,319,97,108,69,	0,10219,21442,22393,23897,25588,
#Partially deleted in new
chr3	193593286	193696619	chr3:193593286-193696619	1	+	193593377	193692127	789624	30	123,319,97,108,68,54,15,105,87,114,81,75,72,100,131,73,73,116,65,77,166,153,109,80,141,117,94,111,70,2014,	0,21436,22387,23891,25582,38325,38468,42131,43908,44665,49478,49688,50086,50241,50688,52266,52441,53778,54783,55508,61575,63793,65600,66195,69535,71593,73009,73883,98776,101319,
#Partially deleted in new
chr3	193593291	193696496	chr3:193593291-193696496	0	+	193593377	193648799	789624	28	118,319,97,108,68,54,105,87,114,81,75,72,100,131,73,73,116,77,166,153,109,80,141,117,94,111,70,1891,	0,21431,22382,23886,25577,38320,42126,43903,44660,49473,49683,50081,50236,50683,52261,52436,53773,55503,61570,63788,65595,66190,69530,71588,73004,73878,98771,101314,
#Partially deleted in new
chr3	193614721	193695408	chr3:193614721-193695408	0	+	193614721	193655039	789624	28	320,97,108,68,54,105,87,114,81,75,72,100,131,73,73,116,65,77,191,153,109,80,141,117,94,111,70,803,	0,952,2456,4147,16890,20696,22473,23230,28043,28253,28651,28806,29253,30831,31006,32343,33348,34073,40140,42358,44165,44760,48100,50158,51574,52448,77341,79884,
#Partially deleted in new
chr3	193614761	193695721	chr3:193614761-193695721	0	+	193614761	193618728	789624	26	280,97,108,234,54,105,87,114,72,100,131,73,73,116,65,77,166,153,109,80,141,117,94,111,70,1116,	0,912,2416,3941,16850,20656,22433,23190,28611,28766,29213,30791,30966,32303,33308,34033,40100,42318,44125,44720,48060,50118,51534,52408,77301,79844,
#Partially deleted in new
chr3	193614761	193695721	chr3:193614761-193695721	0	+	193614761	193618728	789624	26	280,97,108,234,54,105,87,114,72,100,131,73,73,116,65,77,166,153,109,80,141,117,94,111,70,1116,	0,912,2416,3941,16850,20656,22433,23190,28611,28766,29213,30791,30966,32303,33308,34033,40100,42318,44125,44720,48060,50118,51534,52408,77301,79844,
#Partially deleted in new
chr3	193615030	193697440	chr3:193615030-193697440	0	+	193615030	193645757	789624	27	11,97,108,68,54,105,87,114,81,75,72,100,131,73,116,65,77,166,153,109,80,141,117,94,111,70,2835,	0,643,2147,3838,16581,20387,22164,22921,27734,27944,28342,28497,28944,30697,32034,33039,33764,39831,42049,43856,44451,47791,49849,51265,52139,77032,79575,
#Partially deleted in new
chr3	193615702	193635471	chr3:193615702-193635471	0	+	193615702	193618728	789624	7	68,108,54,234,111,54,54,	0,1475,2081,3000,10389,15909,19715,
#Partially deleted in new
chr3	193618608	193627332	chr3:193618608-193627332	3	-	193618608	193618608	789624	3	302,86,104,	0,992,8620,
#Partially deleted in new
chr3	193618608	193627337	chr3:193618608-193627337	0	-	193618608	193618608	8553170	2	302,109,	0,8620,
#Partially deleted in new
chr3	193618826	193642985	chr3:193618826-193642985	0	+	193618826	193618826	8553170	7	110,54,105,87,114,81,11,	0,12785,16591,18368,19125,23938,24148,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	193624188	193624301	chr3:193624188-193624301	3	+	193624188	193624188	8553170	1	113,	0,
#Partially deleted in new
chr3	193626057	193638048	chr3:193626057-193638048	0	+	193626057	193626057	8553170	5	145,54,105,87,97,	0,5554,9360,11137,11894,
#Partially deleted in new
chr3	193637215	193644151	chr3:193637215-193644151	0	+	193637215	193637215	8553170	7	66,114,81,75,72,100,177,	0,736,5549,5759,6157,6312,6759,
#Partially deleted in new
chr3	193638018	193697800	chr3:193638018-193697800	0	+	193638018	193692127	789624	20	47,81,72,100,131,73,73,116,65,77,166,153,109,80,141,117,94,111,70,3195,	0,4746,5354,5509,5956,7534,7709,9046,10051,10776,16843,19061,20868,21463,24803,26861,28277,29151,54044,56587,
#Partially deleted in new
chr3	193645611	193648460	chr3:193645611-193648460	0	+	193645611	193645611	8553170	4	14,73,116,391,	0,116,1453,2458,
#Partially deleted in new
chr3	193648765	193659514	chr3:193648765-193659514	0	+	193648765	193648765	8553170	5	106,166,153,109,33,	0,6096,8314,10121,10716,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	193662890	193668931	chr3:193662890-193668931	0	+	193662890	193668387	789624	6	72,117,94,111,85,617,	0,1989,3405,4279,4480,5424,
#Partially deleted in new
chr3	193667175	193668621	chr3:193667175-193668621	0	+	193667175	193668621	789624	2	105,288,	0,1158,
#Partially deleted in new
chr3	193691393	193697526	chr3:193691393-193697526	0	+	193691393	193691393	8553170	2	739,2921,	0,3212,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	193740470	193740715	chr3:193740470-193740715	3	-	193740470	193740470	8553170	1	245,	0,
#Deleted in new
chr3	193765680	193766003	chr3:193765680-193766003	7	+	193765680	193765680	16724991	1	323,	0,
#Partially deleted in new
chr3	193842559	193844009	chr3:193842559-193844009	3	-	193842559	193842559	8553170	3	196,148,358,	0,518,1092,
#Partially deleted in new
chr3	193842810	193844024	chr3:193842810-193844024	0	-	193842810	193842810	8553170	2	415,373,	0,841,
#Partially deleted in new
chr3	193957371	194003659	chr3:193957371-194003659	3	-	193957371	193957371	789624	3	1307,233,75,	0,2357,46213,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	193980613	194006098	chr3:193980613-194006098	3	+	193980613	193980613	8553170	3	102,227,237,	0,15495,25248,
#Deleted in new
chr3	193993330	193993985	chr3:193993330-193993985	7	-	193993330	193993330	16724991	1	655,	0,
#Partially deleted in new
chr3	194001856	194003636	chr3:194001856-194003636	1	-	194001856	194001856	8553170	2	720,52,	0,1728,
#Partially deleted in new
chr3	194005258	194015635	chr3:194005258-194015635	1	-	194005258	194005258	8553170	3	396,140,85,	0,5031,10292,
#Partially deleted in new
chr3	194005435	194049340	chr3:194005435-194049340	0	-	194005435	194005435	8553170	4	219,85,101,428,	0,10115,17671,43477,
#Partially deleted in new
chr3	194005436	194049342	chr3:194005436-194049342	0	-	194005436	194005436	8553170	2	218,430,	0,43476,
#Partially deleted in new
chr3	194005455	194070970	chr3:194005455-194070970	0	-	194005455	194005455	789624	3	199,85,149,	0,10095,65366,
#Partially deleted in new
chr3	194005487	194049278	chr3:194005487-194049278	2	-	194005487	194005487	8553170	3	167,85,366,	0,10063,43425,
#Partially deleted in new
chr3	194009457	194070952	chr3:194009457-194070952	1	-	194009457	194009457	789624	4	1120,85,83,131,	0,6093,42902,61364,
#Partially deleted in new
chr3	194015442	194057679	chr3:194015442-194057679	1	-	194015442	194015442	8553170	5	193,101,108,83,43,	0,7664,14203,36917,42194,
#Partially deleted in new
chr3	194015628	194049342	chr3:194015628-194049342	0	-	194015628	194015628	8553170	4	7,101,108,430,	0,7478,14017,33284,
#Partially deleted in new
chr3	194042910	194049342	chr3:194042910-194049342	0	-	194042910	194042910	8553170	2	277,430,	0,6002,
#Partially deleted in new
chr3	194042912	194049341	chr3:194042912-194049341	0	-	194042912	194042912	8553170	2	349,429,	0,6000,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	194043123	194049127	chr3:194043123-194049127	1	-	194043123	194043123	8553170	3	385,210,215,	0,3346,5789,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	194043162	194049340	chr3:194043162-194049340	0	-	194043162	194043162	8553170	3	99,210,428,	0,3307,5750,
#Partially deleted in new
chr3	194043164	194049342	chr3:194043164-194049342	0	-	194043164	194043164	8553170	3	344,112,430,	0,579,5748,
#Partially deleted in new
chr3	194043189	194049342	chr3:194043189-194049342	0	-	194043189	194043189	8553170	2	319,430,	0,5723,
#Partially deleted in new
chr3	194043696	194049333	chr3:194043696-194049333	0	-	194043696	194043696	8553170	2	159,421,	0,5216,
#Partially deleted in new
chr3	194048918	194058449	chr3:194048918-194058449	1	-	194048918	194048918	8553170	3	453,183,96,	0,8714,9435,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	194048919	194069529	chr3:194048919-194069529	1	-	194048919	194048919	789624	4	452,1821,179,214,	0,4845,8717,20396,
#Partially deleted in new
chr3	194052380	194058477	chr3:194052380-194058477	1	-	194052380	194052380	8553170	4	62,179,88,124,	0,5256,5679,5973,
#Partially deleted in new
chr3	194055478	194058449	chr3:194055478-194058449	0	-	194055478	194055478	8553170	2	107,96,	0,2875,
#Partially deleted in new
chr3	194055478	194058518	chr3:194055478-194058518	0	-	194055478	194055478	8553170	3	107,511,108,	0,2158,2932,
#Partially deleted in new
chr3	194055478	194058389	chr3:194055478-194058389	0	-	194055478	194055478	8553170	3	107,179,330,	0,2158,2581,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	194055478	194061748	chr3:194055478-194061748	0	-	194055478	194055478	8553170	3	107,179,483,	0,2158,5787,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	194055478	194065428	chr3:194055478-194065428	0	-	194055478	194055478	8553170	5	107,179,196,128,238,	0,2158,5787,9014,9712,
#Partially deleted in new
chr3	194055478	194058493	chr3:194055478-194058493	0	-	194055478	194055478	8553170	4	107,183,88,83,	0,2154,2581,2932,
#Partially deleted in new
chr3	194055478	194058451	chr3:194055478-194058451	0	-	194055478	194055478	8553170	4	107,183,88,98,	0,2154,2581,2875,
#Partially deleted in new
chr3	194055546	194058468	chr3:194055546-194058468	0	-	194055546	194055546	8553170	4	39,179,88,115,	0,2090,2513,2807,
#Partially deleted in new
chr3	194055546	194058468	chr3:194055546-194058468	0	-	194055546	194055546	8553170	3	39,179,58,	0,2090,2864,
#Partially deleted in new
chr3	194055546	194058467	chr3:194055546-194058467	0	-	194055546	194055546	8553170	3	39,183,114,	0,2086,2807,
#Partially deleted in new
chr3	194055546	194058457	chr3:194055546-194058457	0	-	194055546	194055546	8553170	3	39,179,104,	0,2090,2807,
#Partially deleted in new
chr3	194055547	194069415	chr3:194055547-194069415	0	-	194055547	194055547	8553170	3	38,183,100,	0,2085,13768,
#Partially deleted in new
chr3	194055560	194058473	chr3:194055560-194058473	0	-	194055560	194055560	8553170	3	25,88,120,	0,2499,2793,
#Partially deleted in new
chr3	194070102	194078468	chr3:194070102-194078468	0	+	194070102	194070102	8553170	3	27,83,68,	0,8109,8298,
#Partially deleted in new
chr3	194070238	194080443	chr3:194070238-194080443	3	+	194070238	194070238	8553170	4	88,54,68,319,	0,7973,8162,9886,
#Partially deleted in new
chr3	194091560	194109174	chr3:194091560-194109174	3	+	194091560	194091560	8553170	2	86,320,	0,17294,
#Deleted in new
chr3	194130615	194131201	chr3:194130615-194131201	3	-	194130615	194130615	8553170	2	362,68,	0,518,
#Deleted in new
chr3	194136144	194138732	chr3:194136144-194138732	3	+	194136380	194138233	0	4	344,96,88,1050,	0,472,816,1538,
#Deleted in new
chr3	194136147	194137284	chr3:194136147-194137284	0	+	194136147	194136147	8553170	2	341,668,	0,469,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	194145673	194145971	chr3:194145673-194145971	3	+	194145673	194145673	8553170	1	298,	0,
#Partially deleted in new
chr3	194203015	194250153	chr3:194203015-194250153	3	-	194203015	194203015	789624	3	664,148,98,	0,1803,47040,
#Deleted in new
chr3	194203479	194206307	chr3:194203479-194206307	0	-	194203479	194203479	789624	3	200,148,60,	0,1339,2768,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	194247647	194257772	chr3:194247647-194257772	3	+	194247647	194247647	789624	4	174,307,126,588,	0,1948,7583,9537,
#Partially deleted in new
chr3	194276681	194287368	chr3:194276681-194287368	3	+	194276681	194276681	8553170	3	139,232,1400,	0,244,9287,
#Partially deleted in new
chr3	194296464	194312704	chr3:194296464-194312704	3	-	194296464	194296464	8553170	4	383,38,271,104,	0,5089,9292,16136,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	194299634	194312803	chr3:194299634-194312803	1	-	194299634	194299634	8553170	6	883,111,107,142,271,203,	0,1841,3724,3961,6122,12966,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	194301198	194312800	chr3:194301198-194312800	1	-	194301198	194301198	789624	4	2267,142,271,200,	0,2397,4558,11402,
#Partially deleted in new
chr3	194301445	194306031	chr3:194301445-194306031	0	-	194301445	194301445	8553170	2	141,275,	0,4311,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	194339764	194351328	chr3:194339764-194351328	3	-	194341064	194342702	789624	2	2941,87,	0,11477,
#Partially deleted in new
chr3	194340771	194351318	chr3:194340771-194351318	1	-	194341064	194342702	789624	2	1931,77,	0,10470,
#Partially deleted in new
chr3	194355246	194369743	chr3:194355246-194369743	3	-	194359297	194361043	789624	2	5800,83,	0,14414,
#Partially deleted in new
chr3	194357926	194369731	chr3:194357926-194369731	1	-	194359297	194363370	789624	3	3120,57,71,	0,5429,11734,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	194394820	194398354	chr3:194394820-194398354	3	-	194396599	194398282	789624	1	3534,	0,
#Partially deleted in new
chr3	194402671	194498364	chr3:194402671-194498364	3	-	194405918	194462190	789624	33	3445,81,89,188,178,73,97,110,43,80,123,176,125,121,154,18,117,151,62,189,158,180,132,73,135,70,81,71,183,174,97,231,515,	0,11087,17207,22670,24403,26173,27006,27400,27601,28271,28432,29045,31100,34423,34639,34884,36184,38639,42053,44255,45180,45785,47473,51034,51586,53221,54422,56799,57117,57986,59468,91378,95178,
#Partially deleted in new
chr3	194402673	194452041	chr3:194402673-194452041	1	-	194404036	194450283	789624	18	1493,30,110,43,80,123,176,125,121,154,18,117,151,62,189,158,180,1897,	0,27071,27398,27599,28269,28430,29043,31098,34421,34637,34882,36182,38637,42051,44253,45178,45783,47471,
#Partially deleted in new
chr3	194402673	194487002	chr3:194402673-194487002	1	-	194405918	194462190	789624	33	3443,81,89,188,178,73,97,110,43,80,123,176,125,121,154,18,117,151,62,189,158,180,132,73,135,70,81,71,183,174,97,42,437,	0,11085,17205,22668,24401,26171,27004,27398,27599,28269,28430,29043,31098,34421,34637,34882,36182,38637,42051,44253,45178,45783,47471,51032,51584,53219,54420,56797,57115,57984,59466,83120,83892,
#Partially deleted in new
chr3	194402676	194462212	chr3:194402676-194462212	1	-	194405918	194462190	789624	31	3440,90,81,89,188,178,73,97,110,43,80,123,176,125,121,154,18,117,151,62,189,158,180,132,73,135,70,71,183,174,73,	0,9522,11082,17202,22665,24398,26168,27001,27395,27596,28266,28427,29040,31095,34418,34634,34879,36179,38634,42048,44250,45175,45780,47468,51029,51581,53216,56794,57112,57981,59463,
#Partially deleted in new
chr3	194402679	194468239	chr3:194402679-194468239	1	-	194405918	194462190	789624	32	3437,81,89,188,178,73,97,110,43,80,123,176,125,121,154,18,117,151,62,189,158,180,132,73,135,70,81,71,183,174,97,356,	0,11079,17199,22662,24395,26165,26998,27392,27593,28263,28424,29037,31092,34415,34631,34876,36176,38631,42045,44247,45172,45777,47465,51026,51578,53213,54414,56791,57109,57978,59460,65204,
#Partially deleted in new
chr3	194402688	194459918	chr3:194402688-194459918	0	-	194405918	194459918	789624	30	3428,90,81,89,188,178,73,97,110,43,80,123,176,125,121,154,18,117,151,62,189,158,180,132,73,135,70,81,71,130,	0,9510,11070,17190,22653,24386,26156,26989,27383,27584,28254,28415,29028,31083,34406,34622,34867,36167,38622,42036,44238,45163,45768,47456,51017,51569,53204,54405,56782,57100,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr3	194402722	194453057	chr3:194402722-194453057	0	-	194402722	194402722	8553170	25	3394,90,81,89,31,188,178,73,97,110,43,80,123,176,125,121,154,18,117,151,62,189,158,180,2913,	0,9476,11036,17156,21679,22619,24352,26122,26955,27349,27550,28220,28381,28994,31049,34372,34588,34833,36133,38588,42002,44204,45129,45734,47422,
#Partially deleted in new
chr3	194403207	194431181	chr3:194403207-194431181	0	-	194405959	194431181	789624	10	2909,31,188,178,73,97,110,43,80,78,	0,21194,22134,23867,25637,26470,26864,27065,27735,27896,
#Partially deleted in new
chr3	194403464	194413063	chr3:194403464-194413063	0	-	194403464	194403464	8553170	2	2652,865,	0,8734,
#Partially deleted in new
chr3	194413813	194420384	chr3:194413813-194420384	0	-	194413813	194413813	8553170	2	26,506,	0,6065,
#Deleted in new
chr3	194430929	194432022	chr3:194430929-194432022	0	-	194430929	194430929	8553170	3	93,123,306,	0,174,787,
#Partially deleted in new
chr3	194447095	194453801	chr3:194447095-194453801	0	-	194447095	194447095	8553170	5	20,158,180,132,96,	0,756,1361,3049,6610,
#Deleted in new
chr3	194459031	194459872	chr3:194459031-194459872	0	-	194459031	194459031	8553170	2	510,84,	0,757,
#Partially deleted in new
chr3	194459888	194486659	chr3:194459888-194486659	0	-	194459888	194462190	789624	5	83,174,97,42,94,	0,769,2251,25905,26677,
#Partially deleted in new
chr3	194460742	194468239	chr3:194460742-194468239	0	-	194460742	194462190	789624	3	89,97,356,	0,1397,7141,
#Deleted in new
chr3	194471922	194472085	chr3:194471922-194472085	7	+	194471922	194471922	16724991	1	163,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	194487453	194518279	chr3:194487453-194518279	3	+	194487453	194487453	8553170	3	1273,198,1209,	0,10484,29617,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	194496316	194501503	chr3:194496316-194501503	3	-	194496316	194496316	8553170	2	2727,242,	0,4945,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	194497958	194510647	chr3:194497958-194510647	0	+	194497958	194497958	8553170	2	177,242,	0,12447,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	194533502	194533583	chr3:194533502-194533583	3	-	194533502	194533502	8553170	1	81,	0,
#Partially deleted in new
chr3	194562977	194564001	chr3:194562977-194564001	7	-	194562977	194562977	16724991	3	93,104,287,	0,224,737,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	194587672	194633421	chr3:194587672-194633421	1	-	194588528	194633215	789624	11	967,159,105,129,171,141,87,167,94,127,343,	0,16614,23243,27896,29426,29963,35551,35856,38224,40710,45406,
#Partially deleted in new
chr3	194587677	194617155	chr3:194587677-194617155	0	-	194588528	194617155	789624	6	962,33,159,105,129,57,	0,5363,16609,23238,27891,29421,
#Partially deleted in new
chr3	194587680	194633325	chr3:194587680-194633325	1	-	194588528	194633215	789624	10	959,159,105,129,171,87,167,94,127,247,	0,16606,23235,27888,29418,35543,35848,38216,40702,45398,
#Partially deleted in new
chr3	194587680	194633281	chr3:194587680-194633281	1	-	194588620	194633215	789624	10	959,155,105,129,171,87,167,94,127,203,	0,16606,23235,27888,29418,35543,35848,38216,40702,45398,
#Partially deleted in new
chr3	194587680	194617645	chr3:194587680-194617645	0	-	194587680	194587680	8553170	5	959,159,105,129,547,	0,16606,23235,27888,29418,
#Partially deleted in new
chr3	194587872	194589946	chr3:194587872-194589946	0	-	194587872	194587872	8553170	2	767,179,	0,1895,
#Partially deleted in new
chr3	194588447	194633325	chr3:194588447-194633325	3	-	194588528	194633215	789624	11	192,30,159,105,129,171,87,167,94,127,247,	0,4593,15839,22468,27121,28651,34776,35081,37449,39935,44631,
#Partially deleted in new
chr3	194588468	194625951	chr3:194588468-194625951	0	-	194588528	194625951	789624	7	171,159,105,102,87,167,55,	0,15818,22447,27100,34755,35060,37428,
#Partially deleted in new
chr3	194588528	194615676	chr3:194588528-194615676	0	-	194588620	194615676	789624	4	111,128,105,108,	0,15785,22387,27040,
#Partially deleted in new
chr3	194596868	194610978	chr3:194596868-194610978	0	-	194596868	194596868	8553170	3	461,159,63,	0,7418,14047,
#Partially deleted in new
chr3	194610925	194633645	chr3:194610925-194633645	0	-	194610925	194610925	8553170	7	95,129,171,87,167,127,83,	0,4643,6173,12298,12603,17457,22637,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	194622547	194633689	chr3:194622547-194633689	1	-	194623184	194625945	789624	5	763,167,94,127,127,	0,981,3349,5835,11015,
#Partially deleted in new
chr3	194623223	194633349	chr3:194623223-194633349	0	-	194623623	194633215	789624	5	87,167,30,127,271,	0,305,2673,5159,9855,
#Partially deleted in new
chr3	194632922	194645401	chr3:194632922-194645401	3	+	194632922	194632922	8553170	2	245,727,	0,11752,
#Partially deleted in new
chr3	194637504	194637664	chr3:194637504-194637664	3	-	194637504	194637504	8553170	1	160,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	194640787	194672477	chr3:194640787-194672477	3	-	194642067	194672162	789624	14	1460,174,80,124,144,102,414,177,61,87,87,121,127,414,	0,3785,5376,7893,10093,10327,11941,18169,19285,24769,25415,25664,29221,31276,
#Partially deleted in new
chr3	194642112	194646444	chr3:194642112-194646444	0	-	194642112	194642112	8553170	3	135,174,281,	0,2460,4051,
#Partially deleted in new
chr3	194642172	194649019	chr3:194642172-194649019	0	-	194642172	194642172	8553170	4	75,174,80,339,	0,2400,3991,6508,
#Partially deleted in new
chr3	194644665	194653102	chr3:194644665-194653102	0	-	194644665	194653102	789624	6	81,80,73,144,102,374,	0,1498,4015,6215,6449,8063,
#Deleted in new
chr3	194650716	194651597	chr3:194650716-194651597	0	-	194650716	194650716	8553170	2	308,483,	0,398,
#Deleted in new
chr3	194650783	194652813	chr3:194650783-194652813	0	-	194650783	194650783	8553170	3	241,102,85,	0,331,1945,
#Partially deleted in new
chr3	194659105	194672162	chr3:194659105-194672162	0	-	194660870	194672162	789624	8	28,61,145,87,87,121,127,99,	0,967,1636,6451,7097,7346,10903,12958,
#Partially deleted in new
chr3	194670062	194672463	chr3:194670062-194672463	0	-	194670062	194670062	8553170	3	73,140,326,	0,1820,2075,
#Deleted in new
chr3	194686543	194689037	chr3:194686543-194689037	3	+	194686826	194688098	789624	1	2494,	0,
#Deleted in new
chr3	194705547	194706964	chr3:194705547-194706964	3	+	194705547	194705547	8553170	2	429,127,	0,1290,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	194708420	194782168	chr3:194708420-194782168	1	+	194708420	194708420	789624	4	727,116,97,2707,	0,36153,37114,71041,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	194709039	194710189	chr3:194709039-194710189	0	+	194709039	194709039	8553170	3	108,124,175,	0,234,975,
#Deleted in new
chr3	194755588	194757422	chr3:194755588-194757422	7	+	194755588	194755588	16724991	1	1834,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	194765237	194768712	chr3:194765237-194768712	3	-	194765237	194765237	789624	3	373,103,77,	0,3177,3398,
#Partially deleted in new
chr3	194768805	194779658	chr3:194768805-194779658	0	+	194768805	194768805	8553170	4	47,72,116,197,	0,934,3350,10656,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	194780228	194781377	chr3:194780228-194781377	2	+	194780228	194780228	8553170	2	141,408,	0,741,
#Partially deleted in new
chr3	194827889	194832592	chr3:194827889-194832592	3	+	194827889	194827889	8553170	3	174,159,131,	0,572,4572,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	195068278	195271167	chr3:195068278-195271167	3	-	195069714	195271058	789624	4	1833,133,148,613,	0,88170,158430,202276,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	195068600	195184798	chr3:195068600-195184798	1	-	195069714	195175673	789624	5	1511,133,223,117,165,	0,87848,107030,111790,116033,
#Partially deleted in new
chr3	195069592	195087372	chr3:195069592-195087372	0	-	195069592	195069592	8553170	3	519,121,106,	0,16309,17674,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	195069630	195154103	chr3:195069630-195154103	0	-	195069630	195069630	8553170	2	481,217,	0,84256,
#Partially deleted in new
chr3	195070036	195209866	chr3:195070036-195209866	0	-	195070036	195070036	8553170	3	75,133,530,	0,86412,139300,
#Partially deleted in new
chr3	195070037	195094209	chr3:195070037-195094209	0	-	195070037	195070037	8553170	2	74,467,	0,23705,
#Partially deleted in new
chr3	195094587	195096057	chr3:195094587-195096057	3	+	195094587	195094587	789624	4	91,93,109,138,	0,697,1011,1332,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	195134505	195134580	chr3:195134505-195134580	3	-	195134505	195134505	5263520	1	75,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	195146727	195147003	chr3:195146727-195147003	3	-	195146727	195146727	8553170	1	276,	0,
#Partially deleted in new
chr3	195147870	195152790	chr3:195147870-195152790	3	+	195147870	195147870	789624	2	235,549,	0,4371,
#Partially deleted in new
chr3	195147890	195152463	chr3:195147890-195152463	0	+	195147890	195147890	8553170	2	215,207,	0,4366,
#Partially deleted in new
chr3	195175654	195209614	chr3:195175654-195209614	0	-	195175654	195175654	8553170	3	199,74,278,	0,31770,33682,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	195180393	195260080	chr3:195180393-195260080	0	-	195180393	195180393	8553170	5	122,154,74,148,67,	0,3082,27031,46315,79620,
#Partially deleted in new
chr3	195226723	195270861	chr3:195226723-195270861	0	-	195270169	195270861	789624	3	133,117,307,	0,43365,43831,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr3	195274735	195443078	chr3:195274735-195443078	3	-	195279327	195442847	789624	23	4693,62,111,110,188,93,185,92,70,209,106,101,52,113,75,96,45,184,59,54,120,58,284,	0,11060,14385,16970,17529,19983,20972,22454,26839,27230,31775,32487,34050,45965,52149,58292,62196,67735,70523,106273,107167,117354,168059,
#Partially deleted in new
chr3	195278514	195442907	chr3:195278514-195442907	1	-	195279327	195442847	789624	25	914,62,111,110,188,93,185,92,70,209,106,101,52,113,75,96,45,186,28,17,9,54,120,58,113,	0,7281,10606,13191,13750,16204,17193,18675,23060,23451,27996,28708,30271,42186,48370,54513,58417,63956,64146,66775,66794,102494,103388,113575,164280,
#Deleted in new
chr3	195279033	195279799	chr3:195279033-195279799	0	-	195279033	195279033	8553170	2	395,178,	0,588,
#Partially deleted in new
chr3	195280722	195282741	chr3:195280722-195282741	3	-	195280722	195280722	8553170	2	87,603,	0,1416,
#Partially deleted in new
chr3	195285327	195291745	chr3:195285327-195291745	0	-	195285327	195285327	8553170	3	530,111,40,	0,3793,6378,
#Partially deleted in new
chr3	195292313	195301644	chr3:195292313-195301644	0	-	195292313	195301644	789624	6	139,93,105,185,92,70,	0,2405,2882,3394,4876,9261,
#Partially deleted in new
chr3	195295445	195302115	chr3:195295445-195302115	0	-	195295445	195295445	8553170	4	447,92,70,150,	0,1744,6129,6520,
#Partially deleted in new
chr3	195295759	195442853	chr3:195295759-195442853	0	-	195295759	195442847	789624	18	133,92,70,209,106,101,52,21,113,75,96,45,184,59,54,120,58,59,	0,1430,5815,6206,10751,11463,13026,17187,24941,31125,37268,41172,46711,49499,85249,86143,96330,147035,
#Partially deleted in new
chr3	195297223	195306865	chr3:195297223-195306865	0	-	195297223	195297223	8553170	4	58,70,209,355,	0,4351,4742,9287,
#Partially deleted in new
chr3	195302147	195342609	chr3:195302147-195342609	0	-	195302147	195342609	789624	10	27,106,101,52,113,12,75,96,45,139,	0,4363,5075,6638,18553,23296,24737,30880,34784,40323,
#Partially deleted in new
chr3	195326331	195336965	chr3:195326331-195336965	0	-	195326331	195326331	8553170	3	628,96,34,	0,6696,10600,
#Partially deleted in new
chr3	195333081	195356212	chr3:195333081-195356212	0	-	195333081	195333081	8553170	5	42,45,184,59,145,	0,3850,9389,12177,22986,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	195335898	195443043	chr3:195335898-195443043	0	-	195335898	195335898	8553170	7	1078,184,59,54,120,58,249,	0,6572,9360,45110,46004,56191,106896,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	195342605	195442276	chr3:195342605-195442276	0	-	195342605	195342605	8553170	7	49,59,94,54,120,58,127,	0,2653,15085,38403,39297,49484,99544,
#Deleted in new
chr3	195349663	195350030	chr3:195349663-195350030	7	+	195349663	195349663	16724991	1	367,	0,
#Partially deleted in new
chr3	195381008	195442855	chr3:195381008-195442855	0	-	195381008	195382001	789624	3	54,120,61,	0,894,61786,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	195381025	195442905	chr3:195381025-195442905	0	-	195410983	195442847	789624	6	37,120,58,303,71,111,	0,877,11064,29681,31820,61769,
#Deleted in new
chr3	195441792	195443044	chr3:195441792-195443044	0	-	195441792	195441792	8553170	2	328,250,	0,1002,
#Partially deleted in new
chr3	195514424	195543386	chr3:195514424-195543386	3	-	195516895	195543025	789624	6	2518,168,95,78,108,483,	0,4593,9267,10394,15369,28479,
#Partially deleted in new
chr3	195516384	195529861	chr3:195516384-195529861	0	-	195519166	195529861	789624	4	558,168,78,68,	0,2633,8434,13409,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	195516675	195519639	chr3:195516675-195519639	0	-	195516675	195516675	8553170	2	267,622,	0,2342,
#Partially deleted in new
chr3	195516924	195543353	chr3:195516924-195543353	0	-	195516924	195543025	789624	5	18,168,95,108,450,	0,2093,6767,12869,25979,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	195519160	195543158	chr3:195519160-195543158	0	-	195527889	195543025	789624	6	25,95,78,145,108,255,	0,4531,5658,8597,10633,23743,
#Deleted in new
chr3	195523086	195523221	chr3:195523086-195523221	3	-	195523086	195523086	8553170	1	135,	0,
#Partially deleted in new
chr3	195527889	195543027	chr3:195527889-195543027	1	-	195527889	195543025	789624	3	13,108,124,	0,1904,15014,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	195528716	195543386	chr3:195528716-195543386	0	-	195528716	195528716	8553170	2	1185,483,	0,14187,
#Partially deleted in new
chr3	195544047	195546661	chr3:195544047-195546661	0	+	195544047	195544047	8553170	2	111,188,	0,2426,
#Partially deleted in new
chr3	195546403	195550581	chr3:195546403-195550581	3	+	195546403	195546403	8553170	2	516,294,	0,3884,
#Deleted in new
chr3	195546600	195547467	chr3:195546600-195547467	0	+	195546600	195546600	8553170	2	319,120,	0,747,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	195553791	195554043	chr3:195553791-195554043	3	+	195553791	195553791	8553170	1	252,	0,
#Deleted in new
chr3	195554609	195555083	chr3:195554609-195555083	7	+	195554609	195554609	16724991	1	474,	0,
#Deleted in new
chr3	195561214	195561580	chr3:195561214-195561580	7	-	195561214	195561214	16724991	1	366,	0,
#Partially deleted in new
chr3	195568701	195584205	chr3:195568701-195584205	3	-	195568899	195579461	0	5	434,89,122,157,328,	0,2575,5148,10637,15176,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	195568752	195583954	chr3:195568752-195583954	0	-	195573889	195579461	789624	6	383,89,122,122,157,77,	0,2524,5097,8309,10586,15125,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	195568907	195583940	chr3:195568907-195583940	0	-	195568907	195582666	789624	6	228,89,122,157,123,63,	0,2369,4942,10431,13709,14970,
#Partially deleted in new
chr3	195569021	195583940	chr3:195569021-195583940	0	-	195569021	195579461	789624	6	114,89,122,157,136,63,	0,2255,4828,10317,14045,14856,
#Partially deleted in new
chr3	195570590	195584033	chr3:195570590-195584033	0	-	195570590	195570590	8553170	4	775,122,157,156,	0,3259,8748,13287,
#Partially deleted in new
chr3	195614946	195620233	chr3:195614946-195620233	7	+	195614946	195614946	16724991	2	74,1606,	0,3681,
#Deleted in new
chr3	195635187	195636301	chr3:195635187-195636301	7	+	195635187	195635187	16724991	2	68,68,	0,1046,
#Deleted in new
chr3	195650145	195651472	chr3:195650145-195651472	7	-	195650145	195650145	16724991	2	322,748,	0,579,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	195655564	195657927	chr3:195655564-195657927	3	-	195655564	195655564	8553170	3	971,90,623,	0,1076,1740,
#Partially deleted in new
chr3	195658061	195666682	chr3:195658061-195666682	1	+	195658061	195658061	8553170	6	104,86,163,144,165,617,	0,3694,4509,5562,6024,8004,
#Partially deleted in new
chr3	195658064	195688862	chr3:195658064-195688862	0	+	195658064	195658064	789624	14	101,86,163,165,149,123,169,196,170,122,112,131,114,330,	0,3691,4506,6021,8001,10454,13067,14419,15753,19662,23125,23471,25687,30468,
#Partially deleted in new
chr3	195658064	195664109	chr3:195658064-195664109	1	+	195658064	195658064	8553170	5	101,86,163,209,24,	0,3691,4506,5559,6021,
#Partially deleted in new
chr3	195658072	195671791	chr3:195658072-195671791	1	+	195658072	195658072	8553170	7	93,86,163,165,149,123,660,	0,3683,4498,6013,7993,10446,13059,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	195658076	195686140	chr3:195658076-195686140	1	+	195658076	195658076	8553170	14	89,86,163,144,165,149,123,169,196,170,122,112,131,2389,	0,3679,4494,5547,6009,7989,10442,13055,14407,15741,19650,23113,23459,25675,
#Partially deleted in new
chr3	195658092	195664288	chr3:195658092-195664288	0	+	195658092	195658092	8553170	4	73,86,163,203,	0,3663,4478,5993,
#Partially deleted in new
chr3	195658095	195685904	chr3:195658095-195685904	7	+	195658095	195658095	16724991	15	70,86,163,144,165,149,123,169,196,170,122,112,131,114,87,	0,3660,4475,5528,5990,7970,10423,13036,14388,15722,19631,23094,23440,25656,27722,
#Partially deleted in new
chr3	195672606	195678067	chr3:195672606-195678067	0	+	195672606	195672606	8553170	3	73,170,341,	0,1211,5120,
#Partially deleted in new
chr3	195677754	195682093	chr3:195677754-195682093	0	+	195677754	195677754	8553170	3	94,112,558,	0,3435,3781,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	195677783	195696425	chr3:195677783-195696425	1	+	195677783	195677783	8553170	7	65,112,131,114,265,100,65,	0,3406,3752,5968,10749,11555,18577,
#Partially deleted in new
chr3	195680891	195689438	chr3:195680891-195689438	0	+	195680891	195680891	8553170	6	70,112,131,114,265,100,	0,298,644,2860,7641,8447,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	195681278	195708807	chr3:195681278-195708807	0	+	195681278	195681278	8553170	8	23,131,114,229,178,290,135,61,	0,257,2473,15082,17751,20101,26855,27468,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	195681565	195686347	chr3:195681565-195686347	0	+	195681565	195681565	8553170	3	101,114,530,	0,2186,4252,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	195681602	195696524	chr3:195681602-195696524	0	+	195681602	195681602	8553170	5	64,114,122,265,164,	0,2149,4215,6930,14758,
#Partially deleted in new
chr3	195681615	195708230	chr3:195681615-195708230	0	+	195681615	195681615	8553170	6	51,114,122,265,100,97,	0,2136,4202,6917,7723,26518,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	195681615	195708325	chr3:195681615-195708325	1	+	195681615	195681615	8553170	7	51,114,122,118,265,100,192,	0,2136,4202,6586,6917,7723,26518,
#Partially deleted in new
chr3	195681615	195708806	chr3:195681615-195708806	0	+	195681615	195681615	8553170	4	51,114,265,60,	0,2136,6917,27131,
#Partially deleted in new
chr3	195681868	195688553	chr3:195681868-195688553	0	+	195681868	195681868	8553170	3	349,114,21,	0,1883,6664,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	195681987	195686371	chr3:195681987-195686371	1	+	195681987	195681987	8553170	3	230,114,554,	0,1764,3830,
#Partially deleted in new
chr3	195682370	195686260	chr3:195682370-195686260	0	+	195682370	195682370	8553170	3	51,114,443,	0,1381,3447,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	195683459	195686340	chr3:195683459-195686340	1	+	195683459	195683459	8553170	2	406,523,	0,2358,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	195683749	195708268	chr3:195683749-195708268	0	+	195683749	195683749	8553170	5	116,115,265,100,135,	0,2854,4783,5589,24384,
#Partially deleted in new
chr3	195683749	195708504	chr3:195683749-195708504	0	+	195683749	195683749	8553170	4	116,122,265,371,	0,2068,4783,24384,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	195683772	195708801	chr3:195683772-195708801	0	+	195683772	195683772	8553170	6	93,265,229,178,135,55,	0,4760,12588,15257,24361,24974,
#Partially deleted in new
chr3	195683832	195708345	chr3:195683832-195708345	0	+	195683832	195683832	8553170	3	33,265,212,	0,4700,24301,
#Partially deleted in new
chr3	195685820	195708807	chr3:195685820-195708807	0	+	195685820	195685820	8553170	6	127,265,100,63,135,61,	0,2712,3518,3725,22313,22926,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	195686211	195688770	chr3:195686211-195688770	1	+	195686211	195686211	8553170	4	136,187,122,238,	0,220,1986,2321,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	195686302	195701407	chr3:195686302-195701407	1	+	195686302	195686302	8553170	6	45,112,265,229,178,28,	0,304,2230,10058,12727,15077,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	195686416	195701514	chr3:195686416-195701514	0	+	195686416	195686416	8553170	4	202,265,178,135,	0,2116,12613,14963,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	195687820	195701584	chr3:195687820-195701584	1	+	195687820	195687820	8553170	6	499,265,100,229,178,205,	0,712,1518,8540,11209,13559,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	195687820	195699170	chr3:195687820-195699170	0	+	195687820	195687820	8553170	4	499,265,100,141,	0,712,1518,11209,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	195688110	195696479	chr3:195688110-195696479	1	+	195688110	195688110	8553170	2	687,119,	0,8250,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	195688366	195696541	chr3:195688366-195696541	0	+	195688366	195688366	8553170	3	431,100,181,	0,972,7994,
#Partially deleted in new
chr3	195688383	195711689	chr3:195688383-195711689	1	+	195688383	195688383	789624	5	414,100,135,95,124,	0,955,19750,20363,23182,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	195688425	195699116	chr3:195688425-195699116	1	+	195688425	195688425	8553170	5	372,100,63,229,87,	0,913,1120,7935,10604,
#Partially deleted in new
chr3	195688520	195708807	chr3:195688520-195708807	0	+	195688520	195688520	8553170	5	277,100,178,302,61,	0,818,10509,19613,20226,
#Partially deleted in new
chr3	195688547	195708807	chr3:195688547-195708807	0	+	195688547	195688547	8553170	5	250,110,290,135,61,	0,10550,12832,19586,20199,
#Partially deleted in new
chr3	195688581	195708468	chr3:195688581-195708468	0	+	195688581	195688581	8553170	3	216,178,335,	0,10448,19552,
#Partially deleted in new
chr3	195688646	195711670	chr3:195688646-195711670	0	+	195688646	195688646	8553170	4	151,135,95,105,	0,19487,20100,22919,
#Partially deleted in new
chr3	195688650	195708777	chr3:195688650-195708777	0	+	195688650	195688650	8553170	4	147,100,63,644,	0,688,895,19483,
#Partially deleted in new
chr3	195688669	195708807	chr3:195688669-195708807	0	+	195688669	195688669	8553170	4	128,178,302,61,	0,10360,19464,20077,
#Partially deleted in new
chr3	195688681	195708807	chr3:195688681-195708807	0	+	195688681	195688681	8553170	5	116,100,178,116,674,	0,657,10348,12698,19452,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	195688755	195708806	chr3:195688755-195708806	0	+	195688755	195688755	8553170	6	42,100,229,149,302,60,	0,583,7605,10274,19378,19991,
#Partially deleted in new
chr3	195688757	195708807	chr3:195688757-195708807	0	+	195688757	195688757	8553170	6	40,178,116,82,254,61,	0,10272,12622,12830,19376,19989,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	195688779	195708807	chr3:195688779-195708807	0	+	195688779	195688779	8553170	6	18,100,229,178,116,61,	0,559,7581,10250,12600,19967,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	195689336	195699314	chr3:195689336-195699314	0	+	195689336	195689336	8553170	3	102,229,285,	0,7024,9693,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	195689350	195708807	chr3:195689350-195708807	0	+	195689350	195689350	8553170	6	88,229,178,53,302,61,	0,7010,9679,12029,18783,19396,
#Partially deleted in new
chr3	195689374	195711875	chr3:195689374-195711875	0	+	195689374	195689374	8553170	4	64,135,95,310,	0,18759,19372,22191,
#Partially deleted in new
chr3	195689377	195708807	chr3:195689377-195708807	0	+	195689377	195689377	8553170	5	61,63,135,85,61,	0,168,18756,19051,19369,
#Partially deleted in new
chr3	195689413	195708702	chr3:195689413-195708702	0	+	195689413	195689413	8553170	3	25,178,569,	0,9616,18720,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	195689424	195696554	chr3:195689424-195696554	0	+	195689424	195689424	8553170	2	184,194,	0,6936,
#Partially deleted in new
chr3	195698645	195701621	chr3:195698645-195701621	1	+	195698645	195698645	8553170	2	562,242,	0,2734,
#Partially deleted in new
chr3	195698662	195708807	chr3:195698662-195708807	0	+	195698662	195698662	8553170	2	545,61,	0,10084,
#Partially deleted in new
chr3	195699082	195708774	chr3:195699082-195708774	0	+	195699082	195699082	8553170	4	125,290,302,28,	0,2297,9051,9664,
#Partially deleted in new
chr3	195699147	195711681	chr3:195699147-195711681	1	+	195699147	195699147	8553170	4	60,254,95,116,	0,8986,9599,12418,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	195699400	195699497	chr3:195699400-195699497	3	+	195699400	195699400	5263520	1	97,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	195700320	195711875	chr3:195700320-195711875	1	+	195700320	195700320	8553170	3	1349,704,310,	0,7817,11245,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	195701122	195708760	chr3:195701122-195708760	1	+	195701122	195701122	8553170	3	547,302,14,	0,7011,7624,
#Partially deleted in new
chr3	195701617	195711643	chr3:195701617-195711643	7	+	195701617	195701617	16724991	4	52,191,95,78,	0,6520,7129,9948,
#Partially deleted in new
chr3	195701638	195722742	chr3:195701638-195722742	0	+	195701638	195701638	8553170	4	31,135,95,242,	0,6495,7108,20862,
#Partially deleted in new
chr3	195705660	195708804	chr3:195705660-195708804	0	+	195705660	195705660	8553170	2	75,671,	0,2473,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	195706137	195708807	chr3:195706137-195708807	0	+	195706137	195706137	8553170	2	174,674,	0,1996,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	195706694	195708807	chr3:195706694-195708807	0	+	195706694	195706694	8553170	3	432,302,61,	0,1439,2052,
#Partially deleted in new
chr3	195708130	195711875	chr3:195708130-195711875	0	+	195708130	195708130	8553170	3	138,95,310,	0,616,3435,
#Partially deleted in new
chr3	195708133	195711681	chr3:195708133-195711681	0	+	195708133	195708133	8553170	4	135,85,95,116,	0,295,613,3432,
#Partially deleted in new
chr3	195708146	195711875	chr3:195708146-195711875	0	+	195708146	195708146	8553170	3	289,95,310,	0,600,3419,
#Partially deleted in new
chr3	195708153	195724301	chr3:195708153-195724301	0	+	195708153	195708153	8553170	4	282,95,318,55,	0,593,14347,16093,
#Partially deleted in new
chr3	195708153	195733551	chr3:195708153-195733551	0	+	195708153	195708153	8553170	4	115,95,92,402,	0,593,21494,24996,
#Partially deleted in new
chr3	195708153	195711769	chr3:195708153-195711769	0	+	195708153	195708153	8553170	3	360,95,204,	0,593,3412,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	195708153	195716589	chr3:195708153-195716589	0	+	195708153	195708153	8553170	3	282,95,202,	0,593,8234,
#Partially deleted in new
chr3	195708153	195725187	chr3:195708153-195725187	0	+	195708153	195708153	8553170	3	115,95,508,	0,593,16526,
#Partially deleted in new
chr3	195708153	195733551	chr3:195708153-195733551	0	+	195708153	195708153	8553170	2	688,402,	0,24996,
#Partially deleted in new
chr3	195708153	195725030	chr3:195708153-195725030	2	+	195708153	195708153	8553170	3	282,95,351,	0,593,16526,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	195708153	195709587	chr3:195708153-195709587	0	+	195708153	195708153	8553170	2	282,841,	0,593,
#Deleted in new
chr3	195708153	195709219	chr3:195708153-195709219	0	+	195708153	195708153	8553170	3	115,85,473,	0,275,593,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	195708153	195718009	chr3:195708153-195718009	0	+	195708153	195708153	8553170	3	282,95,96,	0,593,9760,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	195708153	195716673	chr3:195708153-195716673	0	+	195708153	195708153	8553170	3	234,95,286,	0,593,8234,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	195708153	195709563	chr3:195708153-195709563	0	+	195708153	195708153	8553170	2	115,817,	0,593,
#Partially deleted in new
chr3	195708153	195711772	chr3:195708153-195711772	0	+	195708153	195708153	8553170	4	115,127,95,207,	0,275,593,3412,
#Partially deleted in new
chr3	195708153	195724800	chr3:195708153-195724800	0	+	195708153	195708153	8553170	4	115,95,318,121,	0,593,14347,16526,
#Partially deleted in new
chr3	195708153	195711739	chr3:195708153-195711739	0	+	195708153	195708153	8553170	3	234,95,174,	0,593,3412,
#Partially deleted in new
chr3	195708153	195733312	chr3:195708153-195733312	0	+	195708153	195708153	8553170	4	115,85,95,163,	0,275,593,24996,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	195708153	195709386	chr3:195708153-195709386	0	+	195708153	195708153	8553170	2	234,640,	0,593,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	195708153	195716970	chr3:195708153-195716970	0	+	195708153	195708153	8553170	3	115,95,583,	0,593,8234,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	195708153	195716674	chr3:195708153-195716674	0	+	195708153	195708153	8553170	4	115,85,95,287,	0,275,593,8234,
#Deleted in new
chr3	195708153	195709176	chr3:195708153-195709176	0	+	195708153	195708153	8553170	3	115,7,430,	0,275,593,
#Partially deleted in new
chr3	195708153	195733346	chr3:195708153-195733346	0	+	195708153	195708153	8553170	4	282,95,92,197,	0,593,21494,24996,
#Partially deleted in new
chr3	195708153	195724767	chr3:195708153-195724767	0	+	195708153	195708153	8553170	4	282,95,318,88,	0,593,14347,16526,
#Partially deleted in new
chr3	195708153	195712123	chr3:195708153-195712123	0	+	195708153	195708153	8553170	2	688,26,	0,3944,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	195708153	195716670	chr3:195708153-195716670	0	+	195708153	195708153	8553170	3	115,95,398,	0,593,8119,
#Partially deleted in new
chr3	195708177	195711793	chr3:195708177-195711793	0	+	195708177	195708177	8553170	3	91,413,228,	0,251,3388,
#Partially deleted in new
chr3	195708177	195719010	chr3:195708177-195719010	0	+	195708177	195708177	8553170	2	664,408,	0,10425,
#Partially deleted in new
chr3	195708177	195724876	chr3:195708177-195724876	0	+	195708177	195708177	8553170	4	91,85,95,197,	0,251,569,16502,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	195708177	195716624	chr3:195708177-195716624	0	+	195708177	195708177	8553170	4	258,95,62,237,	0,569,6843,8210,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	195708177	195722039	chr3:195708177-195722039	0	+	195708177	195708177	8553170	3	91,95,325,	0,569,13537,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	195708177	195709272	chr3:195708177-195709272	0	+	195708177	195708177	8553170	3	258,95,289,	0,569,806,
#Partially deleted in new
chr3	195708177	195711781	chr3:195708177-195711781	0	+	195708177	195708177	8553170	4	91,7,95,216,	0,251,569,3388,
#Partially deleted in new
chr3	195708177	195711875	chr3:195708177-195711875	0	+	195708177	195708177	8553170	3	91,85,287,	0,251,3411,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	195708177	195716645	chr3:195708177-195716645	0	+	195708177	195708177	8553170	4	91,7,95,258,	0,251,569,8210,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	195708177	195716646	chr3:195708177-195716646	0	+	195708177	195708177	8553170	4	91,95,62,259,	0,569,6843,8210,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	195708179	195716564	chr3:195708179-195716564	0	+	195708179	195708179	8553170	5	89,7,95,62,177,	0,249,567,6841,8208,
#Partially deleted in new
chr3	195708182	195739964	chr3:195708182-195739964	0	+	195708182	195708182	8553170	3	253,95,118,	0,564,31664,
#Partially deleted in new
chr3	195708241	195724753	chr3:195708241-195724753	1	+	195708241	195708241	8553170	3	600,318,74,	0,14259,16438,
#Partially deleted in new
chr3	195708249	195733549	chr3:195708249-195733549	0	+	195708249	195708249	8553170	3	138,95,400,	0,497,24900,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	195708285	195735064	chr3:195708285-195735064	0	+	195708285	195708285	8553170	3	150,95,309,	0,461,26470,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	195708287	195716672	chr3:195708287-195716672	1	+	195708287	195708287	8553170	2	554,285,	0,8100,
#Partially deleted in new
chr3	195708479	195725081	chr3:195708479-195725081	0	+	195708479	195708479	8553170	2	362,402,	0,16200,
#Partially deleted in new
chr3	195708582	195733506	chr3:195708582-195733506	1	+	195708582	195708582	8553170	3	259,92,357,	0,21065,24567,
#Partially deleted in new
chr3	195720881	195733551	chr3:195720881-195733551	3	+	195721007	195733218	789624	4	202,1893,92,402,	0,3798,8766,12268,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	195720883	195735033	chr3:195720883-195735033	1	+	195721007	195734866	789624	4	200,1893,92,278,	0,3796,8764,13872,
#Partially deleted in new
chr3	195720950	195724817	chr3:195720950-195724817	0	+	195720950	195720950	8553170	3	133,318,138,	0,1550,3729,
#Partially deleted in new
chr3	195720974	195725094	chr3:195720974-195725094	0	+	195720974	195720974	8553170	2	109,470,	0,3650,
#Partially deleted in new
chr3	195720994	195733504	chr3:195720994-195733504	1	+	195721007	195733218	789624	5	89,480,900,92,355,	0,3685,4678,8653,12155,
#Partially deleted in new
chr3	195724226	195733553	chr3:195724226-195733553	1	+	195724708	195733218	789624	3	2346,92,404,	0,5421,8923,
#Partially deleted in new
chr3	195726180	195730122	chr3:195726180-195730122	0	+	195726180	195726180	8553170	2	392,475,	0,3467,
#Partially deleted in new
chr3	195746764	195778810	chr3:195746764-195778810	0	-	195770334	195778810	789624	23	616,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,131,156,165,134,167,21,	0,2137,4124,4442,5608,6286,7448,10382,12359,14119,14719,15322,16090,16668,17280,18232,18505,22257,23451,24887,27407,31524,32025,
#Partially deleted in new
chr3	195746764	195778810	chr3:195746764-195778810	0	-	195770334	195778810	789624	24	616,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,103,156,89,134,153,21,	0,2137,4124,4442,5608,6286,7448,10382,12359,14119,14719,15322,16090,16668,17280,18232,18505,19898,22285,23451,24887,27407,31538,32025,
#Partially deleted in new
chr3	195746764	195811857	chr3:195746764-195811857	3	-	195747175	195811817	789624	24	616,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,131,156,165,134,153,122,	0,2137,4124,4442,5608,6286,7448,10382,12359,14119,14719,15322,16090,16668,17280,18232,18505,19898,22257,23451,24887,27407,31538,64971,
#Partially deleted in new
chr3	195746764	195811857	chr3:195746764-195811857	1	-	195747175	195811817	789624	23	616,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,131,156,165,134,122,	0,2137,4124,4442,5608,6286,7448,10382,12359,14119,14719,15322,16090,16668,17280,18232,18505,19898,22257,23451,24887,27407,64971,
#Partially deleted in new
chr3	195746764	195778810	chr3:195746764-195778810	0	-	195770334	195778810	789624	23	616,163,224,65,74,180,182,138,234,102,168,91,209,120,126,180,89,131,156,89,134,153,21,	0,2137,4124,4442,5608,6286,10382,12359,14119,14719,15322,16090,16668,17280,18232,18505,19898,22257,23451,24887,27407,31538,32025,
#Partially deleted in new
chr3	195746764	195778810	chr3:195746764-195778810	0	-	195770334	195778810	789624	23	616,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,131,156,89,134,153,21,	0,2137,4124,4442,5608,6286,7448,10382,12359,14119,14719,15322,16090,16668,17280,18232,18505,22257,23451,24887,27407,31538,32025,
#Partially deleted in new
chr3	195746764	195778810	chr3:195746764-195778810	0	-	195770879	195778810	789624	24	616,163,224,65,74,180,182,138,234,102,168,91,209,120,126,180,89,131,156,209,165,134,167,21,	0,2137,4124,4442,5608,6286,10382,12359,14119,14719,15322,16090,16668,17280,18232,18505,19898,22257,23451,23913,24887,27407,31524,32025,
#Partially deleted in new
chr3	195746764	195812277	chr3:195746764-195812277	1	-	195747175	195811817	789624	25	616,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,131,156,165,134,153,12708,542,	0,2137,4124,4442,5608,6286,7448,10382,12359,14119,14719,15322,16090,16668,17280,18232,18505,19898,22257,23451,24887,27407,31538,32025,64971,
#Partially deleted in new
chr3	195746764	195811889	chr3:195746764-195811889	0	-	195753185	195811817	789624	24	616,163,224,65,74,180,182,138,234,102,168,91,209,120,126,180,89,131,156,165,134,153,12708,154,	0,2137,4124,4442,5608,6286,10382,12359,14119,14719,15322,16090,16668,17280,18232,18505,19898,22257,23451,24887,27407,31538,32025,64971,
#Partially deleted in new
chr3	195747057	195811889	chr3:195747057-195811889	0	-	195766719	195811817	789624	24	323,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,131,89,134,153,12708,154,	0,1844,3831,4149,5315,5993,7155,10089,12066,13826,14426,15029,15797,16375,16987,17939,18212,19605,21964,24594,27114,31245,31732,64678,
#Partially deleted in new
chr3	195747057	195811889	chr3:195747057-195811889	0	-	195770334	195811817	789624	25	323,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,131,156,165,134,167,12708,154,	0,1844,3831,4149,5315,5993,7155,10089,12066,13826,14426,15029,15797,16375,16987,17939,18212,19605,21964,23158,24594,27114,31231,31732,64678,
#Partially deleted in new
chr3	195747057	195811889	chr3:195747057-195811889	0	-	195766685	195811817	789624	24	323,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,103,89,134,153,12708,154,	0,1844,3831,4149,5315,5993,7155,10089,12066,13826,14426,15029,15797,16375,16987,17939,18212,19605,21992,24594,27114,31245,31732,64678,
#Partially deleted in new
chr3	195747057	195811889	chr3:195747057-195811889	1	-	195747175	195811817	789624	24	323,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,131,165,134,153,12708,154,	0,1844,3831,4149,5315,5993,7155,10089,12066,13826,14426,15029,15797,16375,16987,17939,18212,19605,21964,24594,27114,31245,31732,64678,
#Partially deleted in new
chr3	195747057	195811889	chr3:195747057-195811889	0	-	195770334	195811817	789624	25	323,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,131,156,89,134,153,12708,154,	0,1844,3831,4149,5315,5993,7155,10089,12066,13826,14426,15029,15797,16375,16987,17939,18212,19605,21964,23158,24594,27114,31245,31732,64678,
#Partially deleted in new
chr3	195747057	195811889	chr3:195747057-195811889	0	-	195766719	195811817	789624	25	323,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,103,156,165,134,153,12708,154,	0,1844,3831,4149,5315,5993,7155,10089,12066,13826,14426,15029,15797,16375,16987,17939,18212,19605,21992,23158,24594,27114,31245,31732,64678,
#Partially deleted in new
chr3	195747057	195811889	chr3:195747057-195811889	0	-	195770334	195811817	789624	23	323,163,224,65,74,154,138,234,102,168,91,209,120,126,180,89,131,156,165,134,167,12708,154,	0,1844,3831,4149,5315,5993,12066,13826,14426,15029,15797,16375,16987,17939,18212,19605,21964,23158,24594,27114,31231,31732,64678,
#Partially deleted in new
chr3	195747057	195811889	chr3:195747057-195811889	0	-	195766719	195811817	789624	24	323,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,103,165,134,153,12708,154,	0,1844,3831,4149,5315,5993,7155,10089,12066,13826,14426,15029,15797,16375,16987,17939,18212,19605,21992,24594,27114,31245,31732,64678,
#Partially deleted in new
chr3	195747172	195753994	chr3:195747172-195753994	0	-	195747172	195747172	8553170	6	208,163,224,65,74,944,	0,1729,3716,4034,5200,5878,
#Deleted in new
chr3	195749855	195752520	chr3:195749855-195752520	0	-	195749855	195749855	8553170	2	1257,1314,	0,1351,
#Deleted in new
chr3	195750606	195753103	chr3:195750606-195753103	0	-	195750606	195750606	8553170	4	506,65,74,53,	0,600,1766,2444,
#Partially deleted in new
chr3	195766661	195769688	chr3:195766661-195769688	0	-	195766661	195766661	8553170	3	90,131,332,	0,2360,2695,
#Partially deleted in new
chr3	195809643	195811973	chr3:195809643-195811973	0	-	195809643	195809643	8553170	2	687,238,	0,2092,
#Partially deleted in new
chr3	195836192	195854228	chr3:195836192-195854228	3	-	195836192	195836192	789624	2	423,96,	0,17940,
#Deleted in new
chr3	195836333	195837045	chr3:195836333-195837045	1	-	195836333	195836333	8553170	2	282,292,	0,420,
#Partially deleted in new
chr3	195836339	195860404	chr3:195836339-195860404	0	-	195836339	195836339	789624	2	276,132,	0,23933,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	195843985	195844596	chr3:195843985-195844596	7	+	195843985	195843985	16724991	1	611,	0,
#Partially deleted in new
chr3	195863363	195909802	chr3:195863363-195909802	3	-	195864180	195888588	0	15	824,128,90,1349,92,195,95,147,127,278,153,222,71,181,1318,	0,3525,3805,3997,6750,8912,14889,15082,15685,18687,19793,21448,23613,25062,45121,
#Partially deleted in new
chr3	195863363	195895561	chr3:195863363-195895561	1	-	195864180	195895416	0	15	824,128,1349,45,92,195,95,147,127,278,153,222,71,181,316,	0,3525,3997,6133,6750,8912,14889,15082,15685,18687,19793,21448,23613,25062,31882,
#Partially deleted in new
chr3	195863363	195872382	chr3:195863363-195872382	0	-	195864180	195872382	789624	7	824,128,96,1349,45,92,107,	0,3525,3805,3997,6133,6750,8912,
#Partially deleted in new
chr3	195863364	195869690	chr3:195863364-195869690	0	-	195863364	195863364	8553170	4	823,128,96,2330,	0,3524,3804,3996,
#Partially deleted in new
chr3	195863364	195892784	chr3:195863364-195892784	1	-	195864180	195892488	789624	14	823,128,1349,92,195,95,147,127,278,153,222,71,181,374,	0,3524,3996,6749,8911,14888,15081,15684,18686,19792,21447,23612,25061,29046,
#Deleted in new
chr3	195868083	195870168	chr3:195868083-195870168	0	-	195868083	195868083	8553170	4	214,177,45,55,	0,449,1413,2030,
#Partially deleted in new
chr3	195868216	195892775	chr3:195868216-195892775	0	-	195868216	195868216	8553170	10	1989,195,95,147,127,153,222,71,181,365,	0,4059,10036,10229,10832,14940,16595,18760,20209,24194,
#Partially deleted in new
chr3	195868222	195895933	chr3:195868222-195895933	0	-	195870268	195888588	0	13	487,45,291,195,95,147,127,278,153,222,71,181,39,	0,1274,1891,4053,10030,10223,10826,13828,14934,16589,18754,20203,27672,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	195868224	195886273	chr3:195868224-195886273	0	-	195868224	195868224	8553170	7	1981,195,95,147,127,278,3117,	0,4051,10028,10221,10824,13826,14932,
#Deleted in new
chr3	195868355	195876695	chr3:195868355-195876695	0	-	195868355	195876695	789624	4	354,92,195,85,	0,1758,3920,8255,
#Deleted in new
chr3	195868505	195876650	chr3:195868505-195876650	0	-	195868505	195868505	8553170	4	204,92,195,74,	0,1608,3770,8071,
#Deleted in new
chr3	195868587	195876736	chr3:195868587-195876736	0	-	195868587	195876736	789624	5	122,92,195,65,126,	0,1526,3688,7856,8023,
#Deleted in new
chr3	195868629	195879486	chr3:195868629-195879486	0	-	195868629	195868629	8553170	6	80,265,195,95,147,438,	0,1484,3646,9623,9816,10419,
#Deleted in new
chr3	195869458	195872403	chr3:195869458-195872403	0	-	195869458	195869458	8553170	2	920,128,	0,2817,
#Deleted in new
chr3	195870172	195872806	chr3:195870172-195872806	0	-	195870172	195870172	8553170	2	206,531,	0,2103,
#Partially deleted in new
chr3	195872279	195896161	chr3:195872279-195896161	0	-	195872279	195872279	8553170	2	191,109,	0,23773,
#Partially deleted in new
chr3	195878510	195888584	chr3:195878510-195888584	0	-	195878510	195888584	789624	6	82,127,278,153,71,159,	0,538,3540,4646,8466,9915,
#Partially deleted in new
chr3	195879082	195885033	chr3:195879082-195885033	0	-	195882470	195885033	789624	5	93,278,83,153,222,	0,2968,3362,4074,5729,
#Partially deleted in new
chr3	195879121	195911945	chr3:195879121-195911945	0	-	195879121	195879121	8553170	7	54,43,153,222,71,181,152,	0,3164,4035,5690,7855,9304,32672,
#Deleted in new
chr3	195882328	195882395	chr3:195882328-195882395	3	-	195882328	195882328	5263520	1	67,	0,
#Partially deleted in new
chr3	195884844	195892601	chr3:195884844-195892601	0	-	195885516	195888588	789624	5	189,131,71,181,191,	0,568,2132,3581,7566,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	195884974	195894730	chr3:195884974-195894730	0	-	195884974	195888588	789624	6	59,71,181,96,48,125,	0,2002,3451,6937,9341,9631,
#Partially deleted in new
chr3	195886973	195896783	chr3:195886973-195896783	0	-	195886973	195896226	789624	4	74,181,245,41,	0,1452,9079,9769,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	195908075	195911257	chr3:195908075-195911257	3	+	195908075	195908075	8553170	2	703,1393,	0,1789,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	195912048	195913986	chr3:195912048-195913986	3	+	195912048	195912048	8553170	2	133,492,	0,1446,
#Partially deleted in new
chr3	195912093	195913264	chr3:195912093-195913264	0	+	195912093	195912093	8553170	2	88,116,	0,1055,
#Partially deleted in new
chr3	195913077	195953531	chr3:195913077-195953531	7	-	195913077	195913077	16724991	3	693,112,499,	0,36164,39955,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	195923669	195953511	chr3:195923669-195953511	4	-	195923669	195923669	16724991	4	541,145,875,479,	0,23665,25572,29363,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	195928588	195928775	chr3:195928588-195928775	3	-	195928588	195928588	8553170	1	187,	0,
#Deleted in new
chr3	195937242	195938739	chr3:195937242-195938739	7	+	195937242	195937242	16724991	2	932,310,	0,1187,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	195949187	195952695	chr3:195949187-195952695	4	-	195949187	195949187	16724991	1	3508,	0,
#Deleted in new
chr3	195953348	195954485	chr3:195953348-195954485	5	-	195953348	195953348	16724991	2	51,99,	0,1038,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	195959747	195967520	chr3:195959747-195967520	5	-	195959747	195959747	16724991	5	339,124,122,114,7,	0,552,3552,5681,7766,
#Partially deleted in new
chr3	195959920	195990279	chr3:195959920-195990279	4	-	195959920	195959920	16724991	17	166,122,114,131,112,167,122,170,196,169,123,149,165,246,163,86,90,	0,3379,5508,7593,7958,8298,11402,14476,15784,17162,19823,22241,24191,24571,25706,26598,30269,
#Partially deleted in new
chr3	195963103	195967895	chr3:195963103-195967895	4	-	195963103	195963103	16724991	4	318,149,131,17,	0,2325,4410,4775,
#Partially deleted in new
chr3	195963334	195990258	chr3:195963334-195990258	5	-	195963334	195963334	16724991	15	87,114,131,112,122,170,196,169,123,149,165,144,163,86,69,	0,2094,4179,4544,7988,11062,12370,13748,16409,18827,20777,21259,22292,23184,26855,
#Partially deleted in new
chr3	195971252	195975902	chr3:195971252-195975902	4	-	195971252	195971252	16724991	3	192,170,198,	0,3144,4452,
#Partially deleted in new
chr3	195979744	195990275	chr3:195979744-195990275	4	-	195979744	195979744	16724991	6	122,191,165,163,86,86,	0,2417,4367,5882,6774,10445,
#Partially deleted in new
chr3	195982292	195990305	chr3:195982292-195990305	4	-	195982292	195982292	16724991	5	18,165,163,86,116,	0,1819,3334,4226,7897,
#Partially deleted in new
chr3	195985445	195990318	chr3:195985445-195990318	7	-	195985445	195985445	16724991	3	344,86,129,	0,1073,4744,
#Deleted in new
chr3	195996737	195998233	chr3:195996737-195998233	7	+	195996737	195996737	16724991	2	917,325,	0,1171,
#Partially deleted in new
chr3	196027182	196055214	chr3:196027182-196055214	0	-	196027182	196055214	789624	3	78,141,135,	0,26235,27897,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	196044694	196045254	chr3:196044694-196045254	7	+	196044694	196044694	16724991	2	221,123,	0,437,
#Partially deleted in new
chr3	196049283	196082189	chr3:196049283-196082189	3	-	196051941	196077099	0	19	2901,141,222,82,59,68,64,86,120,158,140,99,114,103,150,196,202,59,147,	0,4134,5796,9000,9290,10896,13298,13570,15025,16159,18234,18748,20171,22112,22719,24646,25875,27780,32759,
#Partially deleted in new
chr3	196049283	196082094	chr3:196049283-196082094	1	-	196051941	196074120	789624	18	2901,141,222,82,59,68,64,86,120,158,140,99,114,103,150,196,59,52,	0,4134,5796,9000,9290,10896,13298,13570,15025,16159,18234,18748,20171,22112,22719,24646,27780,32759,
#Partially deleted in new
chr3	196049475	196082090	chr3:196049475-196082090	1	-	196051941	196077099	0	19	2709,141,222,82,59,68,64,86,120,158,140,99,114,103,150,196,202,59,260,	0,3942,5604,8808,9098,10704,13106,13378,14833,15967,18042,18556,19979,21920,22527,24454,25683,27588,32355,
#Partially deleted in new
chr3	196053491	196055561	chr3:196053491-196055561	0	-	196053491	196053491	8553170	2	67,482,	0,1588,
#Partially deleted in new
chr3	196053508	196062975	chr3:196053508-196062975	0	-	196053508	196053508	8553170	6	50,222,82,59,68,394,	0,1571,4775,5065,6671,9073,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	196055110	196060604	chr3:196055110-196060604	0	-	196055110	196055110	8553170	4	191,82,59,425,	0,3173,3463,5069,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	196057961	196060249	chr3:196057961-196060249	0	-	196057961	196057961	8553170	3	404,59,70,	0,612,2218,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	196058210	196058958	chr3:196058210-196058958	0	-	196058210	196058210	8553170	2	155,385,	0,363,
#Partially deleted in new
chr3	196058282	196063424	chr3:196058282-196063424	0	-	196058282	196058282	8553170	6	83,59,68,64,86,200,	0,291,1897,4299,4571,4942,
#Partially deleted in new
chr3	196058325	196063192	chr3:196058325-196063192	0	-	196058325	196058325	8553170	5	40,59,68,64,339,	0,248,1854,4256,4528,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	196062390	196065550	chr3:196062390-196065550	0	-	196062390	196062390	8553170	4	255,86,120,108,	0,463,1918,3052,
#Partially deleted in new
chr3	196067606	196069700	chr3:196067606-196069700	0	-	196067606	196067606	8553170	3	51,99,246,	0,425,1848,
#Partially deleted in new
chr3	196071439	196082096	chr3:196071439-196082096	0	-	196072144	196077099	789624	5	59,150,202,59,54,	0,563,3719,5624,10603,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	196072818	196072880	chr3:196072818-196072880	3	+	196072818	196072818	8553170	1	62,	0,
#Partially deleted in new
chr3	196074196	196082090	chr3:196074196-196082090	0	-	196074196	196074196	8553170	4	237,202,59,48,	0,962,2867,7846,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	196142635	196160890	chr3:196142635-196160890	3	+	196142635	196142635	789624	3	365,472,991,	0,1270,17264,
#Partially deleted in new
chr3	196197448	196211395	chr3:196197448-196211395	3	-	196198294	196211315	789624	8	277,176,86,106,173,140,122,226,	0,827,1340,9949,10939,11927,13167,13721,
#Partially deleted in new
chr3	196197451	196211437	chr3:196197451-196211437	0	-	196198514	196211315	789624	8	274,139,86,106,173,140,122,268,	0,1000,1337,9946,10936,11924,13164,13718,
#Deleted in new
chr3	196197451	196198910	chr3:196197451-196198910	0	-	196197451	196197451	8553170	3	274,176,122,	0,824,1337,
#Partially deleted in new
chr3	196197451	196211386	chr3:196197451-196211386	0	-	196197451	196197451	8553170	8	274,176,81,106,173,742,44,217,	0,824,1337,9946,10936,11322,13164,13718,
#Partially deleted in new
chr3	196197452	196211437	chr3:196197452-196211437	0	-	196199519	196211315	789624	9	273,176,86,177,106,173,140,122,268,	0,823,1336,1893,9945,10935,11923,13163,13717,
#Deleted in new
chr3	196198393	196199652	chr3:196198393-196199652	0	-	196198393	196198393	8553170	3	58,86,307,	0,395,952,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	196202348	196202453	chr3:196202348-196202453	3	+	196202348	196202348	8553170	1	105,	0,
#Partially deleted in new
chr3	196208409	196211392	chr3:196208409-196211392	0	-	196208409	196208409	8553170	5	151,64,140,122,223,	0,364,966,2206,2760,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	196211486	196217870	chr3:196211486-196217870	0	+	196214469	196217870	789624	5	149,177,89,128,29,	0,2234,2936,5136,6355,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	196214221	196287690	chr3:196214221-196287690	0	-	196214221	196270531	789624	6	152,152,117,100,127,76,	0,33145,33985,43566,56193,73393,
#Partially deleted in new
chr3	196216503	196233430	chr3:196216503-196233430	3	+	196216712	196233199	789624	9	247,95,155,74,159,112,147,106,368,	0,1338,10461,11160,11611,12305,13411,15915,16559,
#Partially deleted in new
chr3	196216534	196227565	chr3:196216534-196227565	0	+	196216534	196216534	8553170	3	216,95,601,	0,1307,10430,
#Partially deleted in new
chr3	196217891	196228885	chr3:196217891-196228885	0	+	196217891	196228885	789624	5	45,155,200,159,77,	0,9073,9646,10223,10917,
#Partially deleted in new
chr3	196227523	196232994	chr3:196227523-196232994	0	+	196227523	196227523	8553170	5	214,159,112,147,576,	0,591,1285,2391,4895,
#Partially deleted in new
chr3	196227940	196233430	chr3:196227940-196233430	0	+	196227940	196227940	8553170	5	333,112,147,106,368,	0,868,1974,4478,5122,
#Partially deleted in new
chr3	196228078	196233380	chr3:196228078-196233380	0	+	196228078	196228078	8553170	4	195,147,106,318,	0,1836,4340,4984,
#Partially deleted in new
chr3	196228620	196230063	chr3:196228620-196230063	0	+	196228620	196228620	8553170	2	300,149,	0,1294,
#Partially deleted in new
chr3	196229841	196270541	chr3:196229841-196270541	1	-	196230013	196270531	789624	9	231,187,189,143,79,152,117,100,127,	0,8866,9705,12106,12720,17525,18365,27946,40573,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	196230004	196243178	chr3:196230004-196243178	0	+	196230004	196242508	789624	2	57,685,	0,12489,
#Deleted in new
chr3	196232403	196233423	chr3:196232403-196233423	0	+	196232403	196232403	8553170	2	121,361,	0,659,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	196233146	196240880	chr3:196233146-196240880	0	+	196233146	196233146	8553170	2	417,260,	0,7474,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	196233449	196237653	chr3:196233449-196237653	0	+	196233449	196233449	8553170	2	730,93,	0,4111,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	196234367	196287713	chr3:196234367-196287713	3	-	196238687	196270531	789624	10	4527,189,143,79,152,117,100,127,64,99,	0,5179,7580,8194,12999,13839,23420,36047,49107,53247,
#Partially deleted in new
chr3	196238550	196287845	chr3:196238550-196287845	1	-	196238687	196270531	789624	9	344,189,143,79,152,117,100,127,231,	0,996,3397,4011,8816,9656,19237,31864,49064,
#Deleted in new
chr3	196238790	196240004	chr3:196238790-196240004	0	-	196238790	196238790	8553170	2	104,458,	0,756,
#Partially deleted in new
chr3	196239564	196287726	chr3:196239564-196287726	0	-	196239564	196270531	789624	8	171,143,79,152,117,100,127,195,	0,2383,2997,7802,8642,18223,30850,47967,
#Partially deleted in new
chr3	196241527	196247471	chr3:196241527-196247471	0	-	196241527	196247471	789624	4	84,143,79,105,	0,420,1034,5839,
#Partially deleted in new
chr3	196241659	196257806	chr3:196241659-196257806	0	-	196241851	196257806	789624	5	431,79,152,117,19,	0,902,5707,6547,16128,
#Partially deleted in new
chr3	196242066	196287674	chr3:196242066-196287674	0	-	196242066	196242066	8553170	6	24,79,957,100,127,143,	0,495,5300,15721,28348,45465,
#Partially deleted in new
chr3	196242393	196248273	chr3:196242393-196248273	0	-	196242393	196242393	8553170	3	247,152,67,	0,4973,5813,
#Partially deleted in new
chr3	196242569	196287752	chr3:196242569-196287752	0	-	196242569	196242569	8553170	5	71,957,100,127,138,	0,4797,15218,27845,45045,
#Partially deleted in new
chr3	196242613	196287690	chr3:196242613-196287690	0	-	196247572	196270531	789624	6	27,277,117,100,127,76,	0,4753,5593,15174,27801,45001,
#Partially deleted in new
chr3	196247451	196287263	chr3:196247451-196287263	0	-	196247451	196270531	789624	5	67,117,100,127,88,	0,755,10336,22963,39724,
#Partially deleted in new
chr3	196247456	196287677	chr3:196247456-196287677	0	-	196257817	196270531	789624	6	62,117,100,86,127,63,	0,750,10331,19823,22958,40158,
#Partially deleted in new
chr3	196247466	196287663	chr3:196247466-196287663	0	-	196247466	196247466	8553170	5	196,117,100,127,49,	0,740,10321,22948,40148,
#Partially deleted in new
chr3	196247507	196287957	chr3:196247507-196287957	0	-	196247507	196270531	789624	5	11,117,100,127,194,	0,699,10280,22907,40256,
#Partially deleted in new
chr3	196248229	196318222	chr3:196248229-196318222	3	-	196270537	196318152	789624	6	94,100,127,70,134,183,	0,9558,22185,58713,67868,69810,
#Partially deleted in new
chr3	196250541	196251413	chr3:196250541-196251413	0	+	196250541	196250541	8553170	2	121,40,	0,832,
#Partially deleted in new
chr3	196250548	196251654	chr3:196250548-196251654	3	+	196250548	196250548	8553170	2	141,281,	0,825,
#Partially deleted in new
chr3	196291218	196318288	chr3:196291218-196318288	3	-	196291326	196318152	789624	5	156,64,70,134,249,	0,4787,15724,24879,26821,
#Partially deleted in new
chr3	196291218	196318214	chr3:196291218-196318214	0	-	196316210	196318152	789624	5	156,64,70,134,179,	0,4787,15724,24879,26817,
#Partially deleted in new
chr3	196291218	196296306	chr3:196291218-196296306	0	-	196291218	196291218	8553170	2	156,301,	0,4787,
#Partially deleted in new
chr3	196291218	196292544	chr3:196291218-196292544	0	-	196291218	196291218	8553170	2	156,203,	0,1123,
#Partially deleted in new
chr3	196298060	196298215	chr3:196298060-196298215	7	-	196298060	196298060	16724991	1	155,	0,
#Partially deleted in new
chr3	196316081	196338373	chr3:196316081-196338373	3	-	196323816	196327590	789624	6	150,254,170,78,202,110,	0,7662,8189,10873,11308,22182,
#Partially deleted in new
chr3	196318329	196323673	chr3:196318329-196323673	0	+	196318329	196318329	789624	2	108,214,	0,5130,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	196318349	196325570	chr3:196318349-196325570	3	+	196318349	196318349	789624	2	88,1741,	0,5480,
#Partially deleted in new
chr3	196318405	196324188	chr3:196318405-196324188	0	+	196318405	196318405	8553170	2	32,432,	0,5351,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	196319341	196338388	chr3:196319341-196338388	1	-	196319897	196327590	789624	6	757,254,166,78,202,125,	0,4402,4933,7613,8048,18922,
#Deleted in new
chr3	196323545	196324322	chr3:196323545-196324322	0	-	196323713	196324322	789624	2	452,48,	0,729,
#Partially deleted in new
chr3	196323548	196338503	chr3:196323548-196338503	1	-	196323816	196327590	789624	4	449,170,202,240,	0,722,3841,14715,
#Partially deleted in new
chr3	196323550	196338388	chr3:196323550-196338388	3	-	196323816	196327590	789624	5	447,170,78,202,125,	0,720,3404,3839,14713,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	196341608	196341715	chr3:196341608-196341715	3	-	196341608	196341608	8553170	1	107,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr3	196347661	196432474	chr3:196347661-196432474	3	-	196356684	196432399	0	11	9185,80,394,128,91,147,113,66,68,148,148,	0,14182,14632,20366,21759,24234,44151,45892,55290,59584,84665,
#Partially deleted in new
chr3	196354876	196432427	chr3:196354876-196432427	0	-	196391904	196432399	789624	10	1970,80,394,128,91,147,113,66,68,101,	0,6967,7417,13151,14544,17019,36936,38677,48075,77450,
#Partially deleted in new
chr3	196356617	196432430	chr3:196356617-196432430	1	-	196356684	196372024	789624	7	229,80,394,128,91,147,104,	0,5226,5676,11410,12803,15278,75709,
#Partially deleted in new
chr3	196391837	196432397	chr3:196391837-196432397	0	-	196391837	196432397	789624	4	88,68,148,71,	0,11114,15408,40489,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	196393580	196416235	chr3:196393580-196416235	0	-	196393580	196407367	789624	5	39,68,148,40,79,	0,9371,13665,21064,22576,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	196393709	196393812	chr3:196393709-196393812	3	-	196393709	196393709	8553170	1	103,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	196397507	196397778	chr3:196397507-196397778	3	-	196397507	196397507	8553170	1	271,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	196399910	196400207	chr3:196399910-196400207	3	+	196399910	196399910	8553170	1	297,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	196400128	196432427	chr3:196400128-196432427	0	-	196400128	196400128	8553170	4	604,68,148,101,	0,2823,7117,32198,
#Deleted in new
chr3	196423321	196423522	chr3:196423321-196423522	7	+	196423321	196423321	16724991	1	201,	0,
#Deleted in new
chr3	196431384	196432530	chr3:196431384-196432530	3	+	196431384	196431384	8553170	2	57,329,	0,817,
#Deleted in new
chr3	196452995	196453055	chr3:196452995-196453055	7	-	196452995	196452995	16724991	1	60,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	196468782	196503768	chr3:196468782-196503768	3	-	196471818	196503173	0	6	3990,82,122,180,77,896,	0,6448,14987,18616,19824,34090,
#Partially deleted in new
chr3	196471759	196503677	chr3:196471759-196503677	0	-	196487528	196503173	789624	5	1013,82,122,180,805,	0,3471,12010,15639,31113,
#Deleted in new
chr3	196474800	196475394	chr3:196474800-196475394	3	+	196474800	196474800	8553170	1	594,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	196506876	196515366	chr3:196506876-196515366	3	-	196507886	196515209	789624	3	1455,150,207,	0,2643,8283,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	196506878	196515346	chr3:196506878-196515346	0	-	196509664	196515209	789624	3	1453,150,243,	0,2641,8225,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	196527338	196528791	chr3:196527338-196528791	7	-	196527338	196527338	16724991	2	694,251,	0,1202,
#Deleted in new
chr3	196536531	196536702	chr3:196536531-196536702	7	+	196536531	196536531	16724991	1	171,	0,
#Partially deleted in new
chr3	196554176	196568639	chr3:196554176-196568639	3	-	196554210	196561475	789624	4	631,496,431,121,	0,6819,12700,14342,
#Partially deleted in new
chr3	196554187	196568581	chr3:196554187-196568581	1	-	196554210	196554804	789624	2	620,63,	0,14331,
#Partially deleted in new
chr3	196554193	196568674	chr3:196554193-196568674	1	-	196554210	196567193	789624	3	614,117,156,	0,12997,14325,
#Partially deleted in new
chr3	196560995	196567310	chr3:196560995-196567310	0	-	196560995	196561475	789624	2	496,120,	0,6195,
#Partially deleted in new
chr3	196561013	196568522	chr3:196561013-196568522	0	-	196561013	196561475	789624	3	478,418,84,	0,5876,7425,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	196568610	196587287	chr3:196568610-196587287	1	+	196577671	196584318	789624	3	177,357,3155,	0,8842,15522,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	196568687	196589059	chr3:196568687-196589059	3	+	196568984	196584318	789624	3	615,357,4927,	0,8765,15445,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	196631497	196632587	chr3:196631497-196632587	3	-	196631497	196631497	789624	2	148,200,	0,890,
#Partially deleted in new
chr3	196639685	196662004	chr3:196639685-196662004	3	+	196654539	196661722	789624	3	190,121,2253,	0,14841,20066,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	196639756	196654993	chr3:196639756-196654993	0	+	196639756	196639756	8553170	2	119,467,	0,14770,
#Partially deleted in new
chr3	196639774	196731093	chr3:196639774-196731093	0	+	196716868	196731093	789624	6	101,121,64,142,214,102,	0,14752,77083,82640,88148,91217,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	196706276	196712293	chr3:196706276-196712293	3	-	196707550	196708669	789624	3	1636,200,365,	0,2251,5652,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	196707060	196712248	chr3:196707060-196712248	1	-	196707550	196711953	789624	2	852,320,	0,4868,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	196708858	196708964	chr3:196708858-196708964	3	-	196708858	196708858	8553170	1	106,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	196712357	196736007	chr3:196712357-196736007	1	+	196712532	196733902	789624	6	287,64,142,214,101,2249,	0,4500,10057,15565,18634,21401,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	196712410	196733902	chr3:196712410-196733902	1	+	196712532	196733902	789624	7	234,64,142,214,54,101,144,	0,4447,10004,15512,16291,18581,21348,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	196712532	196733902	chr3:196712532-196733902	1	+	196712532	196733902	789624	7	112,64,142,214,54,101,144,	0,4325,9882,15390,16169,18459,21226,
#Partially deleted in new
chr3	196712532	196733902	chr3:196712532-196733902	3	+	196712532	196733902	789624	6	112,64,142,214,101,144,	0,4325,9882,15390,18459,21226,
#Partially deleted in new
chr3	196712559	196734040	chr3:196712559-196734040	0	+	196712559	196721219	789624	7	85,64,180,142,214,101,282,	0,4298,8617,9855,15363,18432,21199,
#Partially deleted in new
chr3	196712559	196728037	chr3:196712559-196728037	0	+	196712559	196726699	789624	5	85,64,142,117,115,	0,4298,9855,14095,15363,
#Partially deleted in new
chr3	196712602	196728351	chr3:196712602-196728351	1	+	196716868	196728180	789624	4	42,64,142,429,	0,4255,9812,15320,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	196712670	196734289	chr3:196712670-196734289	0	+	196716868	196726699	789624	8	454,64,142,117,214,54,101,531,	0,4187,9744,13984,15252,16031,18321,21088,
#Partially deleted in new
chr3	196712680	196728110	chr3:196712680-196728110	0	+	196716868	196728110	789624	4	444,64,142,188,	0,4177,9734,15242,
#Partially deleted in new
chr3	196712721	196722556	chr3:196712721-196722556	0	+	196712721	196712721	8553170	4	403,64,146,142,	0,4136,5087,9693,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	196739856	196832647	chr3:196739856-196832647	3	+	196782646	196828405	0	15	301,208,101,148,32,108,133,64,49,113,118,100,197,138,4329,	0,42769,62070,63160,65495,66722,67925,70733,72362,72882,74594,78200,80514,87339,88462,
#Deleted in new
chr3	196747191	196747324	chr3:196747191-196747324	3	-	196747191	196747191	8553170	1	133,	0,
#Deleted in new
chr3	196806578	196808044	chr3:196806578-196808044	0	+	196806578	196806578	8553170	2	108,263,	0,1203,
#Partially deleted in new
chr3	196812217	196828429	chr3:196812217-196828429	0	+	196812217	196828405	789624	6	50,113,118,100,197,111,	0,521,2233,5839,8153,16101,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	196867855	196934714	chr3:196867855-196934714	3	+	196885181	196930923	789624	10	218,1544,106,139,48,78,138,84,51,3902,	0,17295,31810,32068,32509,35677,55558,59940,61777,62957,
#Partially deleted in new
chr3	196867855	196931035	chr3:196867855-196931035	1	+	196885181	196930923	789624	9	218,1544,106,139,48,78,84,51,223,	0,17295,31810,32068,32509,35677,59940,61777,62957,
#Partially deleted in new
chr3	196867944	196931012	chr3:196867944-196931012	1	+	196899682	196930923	789624	9	129,106,139,48,78,138,84,51,200,	0,31721,31979,32420,35588,55469,59851,61688,62868,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	196900038	196905224	chr3:196900038-196905224	0	+	196900038	196900038	8553170	4	24,48,78,280,	0,326,3494,4906,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	196912645	196914579	chr3:196912645-196914579	3	+	196912645	196912645	8553170	2	693,720,	0,1214,
#Partially deleted in new
chr3	196923417	196931111	chr3:196923417-196931111	0	+	196923417	196930923	789624	3	134,51,299,	0,6215,7395,
#Partially deleted in new
chr3	196927811	196932328	chr3:196927811-196932328	0	+	196927811	196931939	789624	4	68,51,88,415,	0,1821,3001,4102,
#Partially deleted in new
chr3	196929185	196931079	chr3:196929185-196931079	0	+	196929185	196929185	8553170	2	498,267,	0,1627,
#Partially deleted in new
chr3	196935401	196937690	chr3:196935401-196937690	0	-	196935401	196935401	8553170	2	95,676,	0,1613,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	196935405	196942377	chr3:196935405-196942377	1	-	196937010	196939300	789624	4	1677,139,182,218,	0,2104,3845,6754,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	196935406	196942597	chr3:196935406-196942597	3	-	196937010	196942503	0	4	1676,139,182,172,	0,2103,3844,7019,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	196935406	196942560	chr3:196935406-196942560	0	-	196935406	196935406	8553170	2	4026,135,	0,7019,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	196935408	196942594	chr3:196935408-196942594	0	-	196939401	196942503	789624	4	1674,139,182,225,	0,2101,3842,6961,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	196935433	196942560	chr3:196935433-196942560	1	-	196937010	196942503	0	4	1649,122,40,135,	0,2076,3959,6992,
#Partially deleted in new
chr3	196936776	196942440	chr3:196936776-196942440	1	-	196937010	196941958	0	4	306,139,182,506,	0,733,2474,5158,
#Partially deleted in new
chr3	196936832	196942523	chr3:196936832-196942523	0	-	196936832	196936832	8553170	3	816,182,98,	0,2418,5593,
#Partially deleted in new
chr3	196936925	196941906	chr3:196936925-196941906	1	-	196937010	196939300	789624	4	157,139,182,198,	0,584,2325,4783,
#Partially deleted in new
chr3	196937022	196942436	chr3:196937022-196942436	0	-	196937022	196939300	789624	5	60,139,182,116,67,	0,487,2228,4464,5347,
#Partially deleted in new
chr3	196937339	196941769	chr3:196937339-196941769	0	-	196937339	196937339	8553170	3	309,182,61,	0,1911,4369,
#Partially deleted in new
chr3	196938902	196942508	chr3:196938902-196942508	0	-	196938902	196938902	8553170	2	530,139,	0,3467,
#Partially deleted in new
chr3	196939254	196941856	chr3:196939254-196941856	0	-	196939254	196939300	789624	2	178,370,	0,2232,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	196939876	196942534	chr3:196939876-196942534	3	+	196939876	196939876	789624	3	257,163,142,	0,1103,2516,
#Deleted in new
chr3	196942622	196943540	chr3:196942622-196943540	3	+	196942716	196943016	789624	1	918,	0,
#Partially deleted in new
chr3	196946342	196968833	chr3:196946342-196968833	3	-	196947156	196952031	789624	3	2343,211,147,	0,5478,22344,
#Partially deleted in new
chr3	196946736	196951930	chr3:196946736-196951930	0	-	196948535	196951930	789624	2	1837,110,	0,5084,
#Partially deleted in new
chr3	196948096	196968871	chr3:196948096-196968871	1	-	196948307	196952031	789624	3	279,211,185,	0,3724,20590,
#Partially deleted in new
chr3	196951537	196969060	chr3:196951537-196969060	0	-	196951537	196951537	8553170	2	494,374,	0,17149,
#Partially deleted in new
chr3	196983889	196986942	chr3:196983889-196986942	7	-	196983889	196983889	16724991	2	306,240,	0,2813,
#Deleted in new
chr3	196986675	196987558	chr3:196986675-196987558	5	-	196986675	196986675	16724991	1	883,	0,
#Partially deleted in new
chr3	196988620	197004179	chr3:196988620-197004179	0	-	196988620	196988620	8553170	2	527,279,	0,15280,
#Partially deleted in new
chr3	196999459	197004736	chr3:196999459-197004736	2	+	196999459	196999459	8553170	2	113,243,	0,5034,
#Partially deleted in new
chr3	197001739	197029816	chr3:197001739-197029816	3	-	197003371	197029702	789624	16	1712,199,188,68,157,195,97,152,181,188,68,157,183,100,155,163,	0,2161,4809,6917,7069,7878,8958,13625,14449,15363,19664,21217,22563,24920,26016,27914,
#Deleted in new
chr3	197002905	197004744	chr3:197002905-197004744	1	+	197002905	197002905	789624	4	68,369,263,251,	0,696,1191,1588,
#Deleted in new
chr3	197003131	197003730	chr3:197003131-197003730	0	+	197003131	197003131	8553170	2	75,129,	0,470,
#Deleted in new
chr3	197003636	197004738	chr3:197003636-197004738	0	+	197003636	197003636	8553170	2	61,245,	0,857,
#Deleted in new
chr3	197003749	197004740	chr3:197003749-197004740	0	+	197003749	197003749	8553170	2	221,247,	0,744,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	197018952	197029791	chr3:197018952-197029791	1	-	197019604	197029702	789624	7	849,68,157,183,100,155,138,	0,2451,4004,5350,7707,8803,10701,
#Partially deleted in new
chr3	197021293	197023095	chr3:197021293-197023095	0	-	197021293	197021293	8553170	2	178,139,	0,1663,
#Deleted in new
chr3	197023853	197029787	chr3:197023853-197029787	0	-	197023853	197029702	789624	5	57,183,100,155,134,	0,449,2806,3902,5800,
#Deleted in new
chr3	197024334	197027064	chr3:197024334-197027064	0	-	197024334	197024334	8553170	2	151,405,	0,2325,
#Deleted in new
chr3	197025541	197029294	chr3:197025541-197029294	0	-	197025541	197025541	8553170	2	1218,1539,	0,2214,
#Partially deleted in new
chr3	197042559	197298576	chr3:197042559-197298576	3	-	197044622	197297204	0	26	2170,92,110,173,102,51,42,100,67,177,115,103,157,121,145,137,170,125,51,54,99,165,167,132,50,159,	0,9017,17329,22716,23148,24144,26659,34026,38491,43020,48352,62343,73367,76850,87967,93982,95662,97580,100158,107183,119080,151865,240119,253786,254626,255858,
#Partially deleted in new
chr3	197042560	197298576	chr3:197042560-197298576	1	-	197044622	197297204	789624	25	2169,92,110,173,102,51,42,97,67,177,115,103,157,121,145,137,170,125,51,54,165,167,132,50,159,	0,9016,17328,22715,23147,24143,26658,34025,38490,43019,48351,62342,73366,76849,87966,93981,95661,97579,100157,107182,151864,240118,253785,254625,255857,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	197043032	197071003	chr3:197043032-197071003	0	-	197043032	197043032	8553170	8	1697,92,110,173,102,51,36,1785,	0,8544,16856,22243,22675,23671,25469,26186,
#Partially deleted in new
chr3	197043630	197299300	chr3:197043630-197299300	1	-	197044622	197297204	0	26	1099,92,110,173,102,51,42,34,67,177,115,103,157,121,145,137,170,125,51,54,99,165,167,132,50,256,	0,7946,16258,21645,22077,23073,25588,32206,37420,41949,47281,61272,72296,75779,86896,92911,94591,96509,99087,106112,118009,150794,239048,252715,253555,255414,
#Partially deleted in new
chr3	197044259	197184131	chr3:197044259-197184131	1	-	197044622	197183808	0	21	470,92,110,173,102,51,42,34,67,177,115,103,157,121,145,137,170,125,51,54,557,	0,7317,15629,21016,21448,22444,24959,31577,36791,41320,46652,60643,71667,75150,86267,92282,93962,95880,98458,105483,139315,
#Partially deleted in new
chr3	197044330	197297204	chr3:197044330-197297204	1	-	197044622	197297204	0	23	399,92,110,173,102,51,42,34,67,177,115,103,157,121,145,137,170,125,51,165,167,132,19,	0,7246,15558,20945,21377,22373,24888,31506,36720,41249,46581,60572,71596,75079,86196,92211,93891,95809,98387,150094,238348,252015,252855,
#Partially deleted in new
chr3	197044550	197298576	chr3:197044550-197298576	1	-	197044622	197297204	0	26	179,92,110,173,102,51,42,34,67,177,115,103,157,121,145,137,170,125,51,54,99,165,167,132,50,159,	0,7026,15338,20725,21157,22153,24668,31286,36500,41029,46361,60352,71376,74859,85976,91991,93671,95589,98167,105192,117089,149874,238128,251795,252635,253867,
#Partially deleted in new
chr3	197044559	197183858	chr3:197044559-197183858	1	-	197044622	197183808	0	22	170,92,110,173,102,51,36,42,34,67,177,115,103,157,121,145,137,170,125,51,54,284,	0,7017,15329,20716,21148,22144,23942,24659,31277,36491,41020,46352,60343,71367,74850,85967,91982,93662,95580,98158,105183,139015,
#Partially deleted in new
chr3	197044622	197298115	chr3:197044622-197298115	1	-	197044622	197297204	0	25	107,92,110,173,102,51,42,34,67,177,115,103,157,121,145,137,170,125,51,54,165,167,132,50,43,	0,6954,15266,20653,21085,22081,24596,31214,36428,40957,46289,60280,71304,74787,85904,91919,93599,95517,98095,105120,149802,238056,251723,252563,253450,
#Partially deleted in new
chr3	197044622	197297204	chr3:197044622-197297204	1	-	197044622	197297204	0	24	107,92,110,173,102,51,42,100,67,177,115,103,157,121,145,137,170,125,51,54,165,167,132,19,	0,6954,15266,20653,21085,22081,24596,31963,36428,40957,46289,60280,71304,74787,85904,91919,93599,95517,98095,105120,149802,238056,251723,252563,
#Partially deleted in new
chr3	197051576	197075871	chr3:197051576-197075871	0	-	197051576	197051576	8553170	6	92,110,534,51,42,35,	0,8312,13699,15127,17642,24260,
#Partially deleted in new
chr3	197065708	197069482	chr3:197065708-197069482	0	-	197065708	197065708	8553170	3	101,51,264,	0,995,3510,
#Partially deleted in new
chr3	197069216	197298576	chr3:197069216-197298576	0	-	197091024	197297204	789624	15	44,34,100,177,115,145,137,170,125,51,165,167,132,50,159,	0,6620,7369,16363,21695,61310,67325,69005,70923,73501,125208,213462,227129,227969,229201,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr3	197078462	197298115	chr3:197078462-197298115	0	-	197085539	197297204	789624	19	71,67,461,115,103,157,121,145,137,170,125,51,54,99,165,167,132,50,443,	0,2588,6833,12449,26440,37464,40947,52064,58079,59759,61677,64255,71280,83177,115962,204216,217883,218723,219210,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr3	197080477	197298631	chr3:197080477-197298631	0	-	197080477	197080477	8553170	17	640,177,115,103,157,121,145,137,170,125,51,54,165,167,132,50,96,	0,5102,10434,24425,35449,38932,50049,56064,57744,59662,62240,69265,113947,202201,215868,216708,218058,
#Partially deleted in new
chr3	197080989	197085658	chr3:197080989-197085658	0	-	197080989	197080989	8553170	2	128,79,	0,4590,
#Partially deleted in new
chr3	197116037	197183634	chr3:197116037-197183634	0	-	197116037	197183634	789624	8	46,121,145,137,170,125,54,60,	0,3372,14489,20504,22184,24102,33705,67537,
#Partially deleted in new
chr3	197136323	197142799	chr3:197136323-197142799	0	-	197136323	197136323	8553170	4	355,170,125,82,	0,1898,3816,6394,
#Partially deleted in new
chr3	197140144	197260461	chr3:197140144-197260461	0	-	197140144	197260288	789624	4	120,51,165,203,	0,2573,54280,120114,
#Partially deleted in new
chr3	197149742	197297733	chr3:197149742-197297733	0	-	197149742	197297204	789624	6	54,165,167,132,50,61,	0,44682,132936,146603,147443,147930,
#Partially deleted in new
chr3	197149754	197297733	chr3:197149754-197297733	0	-	197149754	197297204	789624	7	42,99,165,167,132,50,61,	0,11885,44670,132924,146591,147431,147918,
#Partially deleted in new
chr3	197194336	197296889	chr3:197194336-197296889	0	-	197194336	197194336	8553170	4	253,167,132,104,	0,88342,102009,102449,
#Partially deleted in new
chr3	197194444	197298623	chr3:197194444-197298623	0	-	197194444	197297204	789624	5	145,167,132,50,88,	0,88234,101901,102741,104091,
#Partially deleted in new
chr3	197194534	197226359	chr3:197194534-197226359	0	-	197194534	197194534	8553170	2	55,503,	0,31322,
#Partially deleted in new
chr3	197194537	197297685	chr3:197194537-197297685	0	-	197194537	197297204	789624	5	52,167,132,50,142,	0,88141,101808,102648,103006,
#Partially deleted in new
chr3	197282609	197297733	chr3:197282609-197297733	0	-	197282609	197282609	8553170	4	236,132,50,61,	0,13736,14576,15063,
#Partially deleted in new
chr3	197282678	197297596	chr3:197282678-197297596	0	-	197282678	197297204	789624	3	167,132,411,	0,13667,14507,
#Deleted in new
chr3	197293877	197293948	chr3:197293877-197293948	3	-	197293877	197293877	5263520	1	71,	0,
#Deleted in new
chr3	197296389	197297523	chr3:197296389-197297523	0	-	197296389	197297204	789624	3	88,50,171,	0,796,963,
#Partially deleted in new
chr3	197298251	197302781	chr3:197298251-197302781	0	+	197298251	197298251	8553170	3	130,115,254,	0,726,4276,
#Partially deleted in new
chr3	197298251	197303747	chr3:197298251-197303747	3	+	197298251	197298251	789624	3	359,115,1220,	0,726,4276,
#Partially deleted in new
chr3	197445060	197458323	chr3:197445060-197458323	3	-	197445060	197445060	8553170	3	263,156,139,	0,12567,13124,
#Partially deleted in new
chr3	197450326	197456654	chr3:197450326-197456654	3	-	197450326	197450326	8553170	3	256,165,179,	0,817,6149,
#Partially deleted in new
chr3	197458404	197467105	chr3:197458404-197467105	3	+	197458404	197458404	8553170	2	138,488,	0,8213,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	197505261	197506986	chr3:197505261-197506986	3	-	197505261	197505261	8553170	1	1725,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	197509782	197573323	chr3:197509782-197573323	3	-	197511894	197546443	789624	7	2582,153,142,111,73,126,143,	0,4481,12857,22629,23706,36578,63398,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	197509782	197556048	chr3:197509782-197556048	1	-	197511894	197546443	789624	7	2582,153,142,111,73,126,268,	0,4481,12857,22629,23706,36578,45998,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	197509782	197555987	chr3:197509782-197555987	1	-	197511894	197546443	789624	8	2582,153,142,111,73,126,152,207,	0,4481,12857,22629,23706,36578,44779,45998,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr3	197511593	197555987	chr3:197511593-197555987	1	-	197511894	197532417	789624	7	771,153,142,103,77,152,207,	0,2670,11046,20818,21891,42968,44187,
#Partially deleted in new
chr3	197511994	197523260	chr3:197511994-197523260	0	-	197511994	197511994	8553170	3	370,153,621,	0,2269,10645,
#Partially deleted in new
chr3	197512167	197555972	chr3:197512167-197555972	0	-	197512167	197532417	789624	6	197,153,142,111,73,192,	0,2096,10472,20244,21321,43613,
#Partially deleted in new
chr3	197512221	197514395	chr3:197512221-197514395	0	-	197512221	197514395	789624	2	143,243,	0,1931,
#Partially deleted in new
chr3	197512327	197533640	chr3:197512327-197533640	0	-	197512327	197512327	8553170	5	37,153,142,111,152,	0,1936,10312,20084,21161,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	197514262	197538484	chr3:197514262-197538484	0	-	197514262	197538331	789624	5	154,142,111,73,179,	0,8377,18149,19226,24043,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	197514262	197515861	chr3:197514262-197515861	0	-	197514262	197514262	8553170	2	154,505,	0,1094,
#Partially deleted in new
chr3	197514265	197555980	chr3:197514265-197555980	0	-	197514265	197546443	789624	7	151,142,111,73,126,152,200,	0,8374,18146,19223,32095,40296,41515,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	197528309	197534156	chr3:197528309-197534156	0	-	197528309	197528309	8553170	3	2435,111,668,	0,4102,5179,
#Partially deleted in new
chr3	197532411	197573323	chr3:197532411-197573323	0	-	197532411	197546443	789624	4	111,73,126,143,	0,1077,13949,40769,
#Partially deleted in new
chr3	197533492	197555958	chr3:197533492-197555958	0	-	197533492	197546443	789624	4	69,126,166,178,	0,12868,21849,22288,
#Partially deleted in new
chr3	197538666	197555977	chr3:197538666-197555977	0	-	197538666	197538666	8553170	3	286,126,197,	0,7694,17114,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	197546118	197555956	chr3:197546118-197555956	0	-	197546118	197546118	8553170	2	368,176,	0,9662,
#Deleted in new
chr3	197554368	197555676	chr3:197554368-197555676	0	-	197554368	197554368	8553170	2	345,335,	0,973,
#Deleted in new
chr3	197580343	197580629	chr3:197580343-197580629	7	-	197580343	197580343	16724991	1	286,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	197614026	197627906	chr3:197614026-197627906	5	-	197614026	197614026	16724991	8	596,122,149,165,144,163,86,127,	0,1537,5713,7677,8160,9193,10085,13753,
#Partially deleted in new
chr3	197619739	197627846	chr3:197619739-197627846	4	-	197619739	197619739	16724991	5	149,165,163,86,275,	0,1964,3480,4372,7832,
#Partially deleted in new
chr3	197619739	197627848	chr3:197619739-197627848	5	-	197619739	197619739	16724991	6	149,165,144,163,87,62,	0,1964,2447,3480,4372,8047,
#Deleted in new
chr3	197634314	197635811	chr3:197634314-197635811	7	+	197634314	197634314	16724991	1	1497,	0,
#Deleted in new
chr3	197645668	197646017	chr3:197645668-197646017	3	+	197645668	197645668	8553170	1	349,	0,
#Partially deleted in new
chr3	197660564	197665757	chr3:197660564-197665757	3	-	197660564	197660564	8553170	2	1213,258,	0,4935,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr3	197671392	197749699	chr3:197671392-197749699	1	-	197675017	197718015	789624	21	3804,94,154,62,239,65,146,133,61,102,211,116,96,45,534,157,107,160,84,154,431,	0,4029,5492,6087,9736,10442,11077,11914,12764,22322,22982,24473,25561,27794,29220,30315,32155,33149,33699,46584,77876,
#Partially deleted in new
chr3	197674019	197718130	chr3:197674019-197718130	0	-	197675017	197718130	789624	19	1177,94,154,62,239,65,146,133,61,102,211,116,45,534,157,107,160,84,154,	0,1402,2865,3460,7109,7815,8450,9287,10137,19695,20355,21846,25167,26593,27688,29528,30522,31072,43957,
#Deleted in new
chr3	197674495	197674576	chr3:197674495-197674576	3	-	197674495	197674495	5263520	1	81,	0,
#Partially deleted in new
chr3	197675017	197736719	chr3:197675017-197736719	3	-	197675017	197736719	789624	20	179,94,154,62,239,65,146,133,61,102,211,116,96,534,157,107,160,84,154,65,	0,404,1867,2462,6111,6817,7452,8289,9139,18697,19357,20848,21936,25595,26690,28530,29524,30074,42959,61637,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr3	197676216	197701710	chr3:197676216-197701710	0	-	197676839	197701710	789624	14	822,62,239,65,146,133,61,75,102,211,116,96,534,3,	0,1263,4912,5618,6253,7090,7940,14857,17498,18158,19649,20737,24396,25491,
#Partially deleted in new
chr3	197683306	197693954	chr3:197683306-197693954	0	-	197683306	197683306	8553170	3	133,61,240,	0,850,10408,
#Partially deleted in new
chr3	197694416	197700769	chr3:197694416-197700769	0	-	197694416	197700769	789624	3	169,116,157,	0,1449,6196,
#Partially deleted in new
chr3	197700459	197736908	chr3:197700459-197736908	1	-	197700565	197736719	789624	7	687,157,107,160,84,154,254,	0,1248,3088,4082,4632,17517,36195,
#Partially deleted in new
chr3	197701735	197749727	chr3:197701735-197749727	0	-	197701735	197701735	8553170	5	129,107,160,84,459,	0,1812,2806,3356,47533,
#Partially deleted in new
chr3	197701859	197736913	chr3:197701859-197736913	0	-	197701859	197703616	789624	5	5,107,160,84,259,	0,1688,2682,3232,34795,
#Partially deleted in new
chr3	197737178	197777001	chr3:197737178-197777001	0	+	197756523	197777001	789624	7	90,132,149,113,97,62,75,	0,19247,31260,32953,36224,36970,39748,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	197748108	197749347	chr3:197748108-197749347	0	-	197748108	197748108	8553170	2	337,79,	0,1160,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr3	197749532	197773436	chr3:197749532-197773436	0	+	197749532	197763596	789624	6	118,132,173,149,113,34,	0,6893,13933,18906,20599,23870,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	197749552	197782134	chr3:197749552-197782134	1	+	197755809	197781909	789624	10	98,165,132,149,113,97,62,75,127,324,	0,6117,6873,18886,20579,23850,24596,27374,28785,32258,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr3	197749749	197787596	chr3:197749749-197787596	3	+	197749971	197781909	789624	9	325,132,149,113,97,62,75,127,5786,	0,6676,18689,20382,23653,24399,27177,28588,32061,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr3	197749877	197777001	chr3:197749877-197777001	0	+	197749971	197763596	789624	8	197,132,173,149,113,97,62,75,	0,6548,13588,18561,20254,23525,24271,27049,
#Partially deleted in new
chr3	197749937	197776942	chr3:197749937-197776942	0	+	197749971	197773408	789624	6	137,132,149,97,62,16,	0,6488,18501,23465,24211,26989,
#Partially deleted in new
chr3	197750166	197770161	chr3:197750166-197770161	0	+	197756523	197770161	789624	4	180,132,149,30,	0,6259,18272,19965,
#Partially deleted in new
chr3	197750389	197782380	chr3:197750389-197782380	1	+	197756523	197781909	789624	9	433,132,149,113,97,62,75,127,570,	0,6036,18049,19742,23013,23759,26537,27948,31421,
#Partially deleted in new
chr3	197778379	197782262	chr3:197778379-197782262	0	+	197778379	197778379	8553170	2	85,448,	0,3435,
#Deleted in new
chr3	197789699	197790369	chr3:197789699-197790369	3	+	197789699	197789699	8553170	1	670,	0,
#Partially deleted in new
chr3	197791225	197829616	chr3:197791225-197829616	0	+	197791278	197820341	789624	4	315,106,137,53,	0,29099,35652,38338,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr3	197791234	197888436	chr3:197791234-197888436	3	+	197791278	197880715	789624	22	306,145,127,106,137,110,94,121,149,77,52,150,60,54,72,49,108,119,138,78,246,4896,	0,23673,25941,29090,35643,38329,39535,40962,44439,48086,56174,56637,61326,63157,67599,74188,74877,78925,80090,84463,89277,92306,
#Partially deleted in new
chr3	197791242	197883376	chr3:197791242-197883376	1	+	197791278	197880715	789624	21	298,145,127,106,137,110,94,121,149,77,52,150,60,54,72,49,108,119,138,78,2865,	0,23665,25933,29082,35635,38321,39527,40954,44431,48078,56166,56629,61318,63149,67591,74180,74869,78917,80082,84455,89269,
#Partially deleted in new
chr3	197791263	197883772	chr3:197791263-197883772	1	+	197791278	197883666	789624	20	277,145,127,106,137,110,94,121,65,77,52,150,60,54,49,108,119,138,78,232,	0,23644,25912,29061,35614,38300,39506,40933,44410,48057,56145,56608,61297,63128,74159,74848,78896,80061,84434,92277,
#Partially deleted in new
chr3	197791263	197883813	chr3:197791263-197883813	1	+	197791278	197883666	789624	18	277,137,110,94,121,65,77,52,150,60,54,72,49,108,119,138,78,273,	0,35614,38300,39506,40933,44410,48057,56145,56608,61297,63128,67570,74159,74848,78896,80061,84434,92277,
#Partially deleted in new
chr3	197791273	197871585	chr3:197791273-197871585	1	+	197791278	197871471	789624	19	267,145,127,106,137,110,94,121,149,77,52,150,60,54,72,49,108,119,261,	0,23634,25902,29051,35604,38290,39496,40923,44400,48047,56135,56598,61287,63118,67560,74149,74838,78886,80051,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr3	197791278	197884302	chr3:197791278-197884302	1	+	197791278	197883666	789624	21	262,145,127,106,137,110,94,121,149,77,52,150,60,54,72,49,108,119,138,78,762,	0,23629,25897,29046,35599,38285,39491,40918,44395,48042,56130,56593,61282,63113,67555,74144,74833,78881,80046,84419,92262,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	197820332	197823465	chr3:197820332-197823465	0	+	197820332	197820332	8553170	2	98,635,	0,2498,
#Partially deleted in new
chr3	197830684	197831296	chr3:197830684-197831296	3	-	197830684	197830684	8553170	2	213,260,	0,352,
#Partially deleted in new
chr3	197835796	197848499	chr3:197835796-197848499	0	+	197835796	197835796	8553170	4	26,77,52,628,	0,3524,11612,12075,
#Partially deleted in new
chr3	197847844	197870176	chr3:197847844-197870176	0	+	197847844	197847844	8553170	7	177,60,54,72,49,108,17,	0,4716,6547,10989,17578,18267,22315,
#Partially deleted in new
chr3	197847958	197880559	chr3:197847958-197880559	0	+	197847958	197880559	789624	9	63,60,54,72,49,119,138,78,48,	0,4602,6433,10875,17464,22201,23366,27739,32553,
#Partially deleted in new
chr3	197848000	197883998	chr3:197848000-197883998	0	+	197848000	197883666	789624	8	21,60,54,49,119,138,78,458,	0,4560,6391,17422,22159,23324,27697,35540,
#Deleted in new
chr3	197850399	197850954	chr3:197850399-197850954	7	-	197850399	197850399	16724991	1	555,	0,
#Partially deleted in new
chr3	197852327	197866179	chr3:197852327-197866179	0	+	197852327	197852327	8553170	5	293,54,72,49,68,	0,2064,6506,13095,13784,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	197854389	197859439	chr3:197854389-197859439	0	+	197854389	197854389	8553170	2	56,606,	0,4444,
#Partially deleted in new
chr3	197858817	197880625	chr3:197858817-197880625	0	+	197858817	197858817	8553170	6	88,49,119,138,78,114,	0,6605,11342,12507,16880,21694,
#Partially deleted in new
chr3	197858820	197875760	chr3:197858820-197875760	0	+	197858820	197858820	8553170	6	85,49,108,119,138,63,	0,6602,7291,11339,12504,16877,
#Partially deleted in new
chr3	197858821	197880612	chr3:197858821-197880612	0	+	197858821	197858821	8553170	5	84,119,138,78,101,	0,11338,12503,16876,21690,
#Partially deleted in new
chr3	197871422	197876340	chr3:197871422-197876340	0	+	197871422	197871422	8553170	2	40,643,	0,4275,
#Partially deleted in new
chr3	197875693	197883685	chr3:197875693-197883685	0	+	197875693	197875693	8553170	2	82,145,	0,7847,
#Partially deleted in new
chr3	197889074	197960019	chr3:197889074-197960019	3	-	197889579	197945627	0	12	640,102,132,75,162,82,129,233,274,67,191,175,	0,2371,3553,23600,24806,36949,43099,49473,54703,56545,70454,70770,
#Partially deleted in new
chr3	197889076	197949925	chr3:197889076-197949925	1	-	197889579	197945627	0	11	638,102,132,75,162,82,129,233,274,67,87,	0,2369,3551,23598,24804,36947,43097,49471,54701,56543,60762,
#Partially deleted in new
chr3	197889077	197913284	chr3:197889077-197913284	0	-	197889077	197889077	8553170	4	637,102,132,610,	0,2368,3550,23597,
#Partially deleted in new
chr3	197889077	197939032	chr3:197889077-197939032	0	-	197889077	197889077	8553170	8	637,102,132,75,162,82,129,485,	0,2368,3550,23597,24803,36946,43096,49470,
#Partially deleted in new
chr3	197889412	197913034	chr3:197889412-197913034	0	-	197889412	197889412	8553170	4	302,132,75,181,	0,3215,23262,23441,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	197894506	197894613	chr3:197894506-197894613	3	+	197894506	197894506	8553170	1	107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	197906367	197912952	chr3:197906367-197912952	0	-	197906367	197906367	8553170	3	328,52,278,	0,6117,6307,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	197913350	197916420	chr3:197913350-197916420	0	-	197913350	197913350	8553170	3	145,162,249,	0,530,2821,
#Partially deleted in new
chr3	197913721	197949885	chr3:197913721-197949885	1	-	197913835	197945627	789624	8	321,82,129,233,274,67,77,47,	0,12302,18452,24826,30056,31898,35651,36117,
#Partially deleted in new
chr3	197926096	197959595	chr3:197926096-197959595	0	-	197926096	197944002	789624	5	9,129,233,274,67,	0,6077,12451,17681,33432,
#Partially deleted in new
chr3	197938659	197960142	chr3:197938659-197960142	0	-	197938659	197938659	8553170	5	116,274,67,191,121,	0,5118,6960,20869,21362,
#Partially deleted in new
chr3	197938665	197949925	chr3:197938665-197949925	0	-	197938665	197938665	8553170	4	110,295,67,87,	0,5091,6954,11173,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	197943897	197949869	chr3:197943897-197949869	0	-	197943897	197945627	789624	3	154,67,329,	0,1722,5643,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	197949979	197956610	chr3:197949979-197956610	3	+	197950967	197955773	0	5	242,43,153,145,861,	0,956,1179,4023,5770,
#Partially deleted in new
chr3	197950189	197955851	chr3:197950189-197955851	1	+	197950967	197955773	0	5	110,43,153,145,102,	0,746,969,3813,5560,
#Partially deleted in new
chr3	197950189	197954451	chr3:197950189-197954451	0	+	197950189	197950189	8553170	4	32,43,153,449,	0,746,969,3813,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr3	197950189	197956610	chr3:197950189-197956610	1	+	197950967	197955773	0	5	32,43,153,145,861,	0,746,969,3813,5560,
#Partially deleted in new
chr3	197950190	197955808	chr3:197950190-197955808	0	+	197950190	197950190	8553170	5	31,171,153,145,59,	0,522,968,3812,5559,
#Partially deleted in new
chr3	197950191	197950884	chr3:197950191-197950884	0	+	197950191	197950191	8553170	2	30,153,	0,540,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	197950192	197951665	chr3:197950192-197951665	0	+	197950192	197950192	8553170	3	29,43,507,	0,743,966,
#Partially deleted in new
chr3	197950205	197955817	chr3:197950205-197955817	0	+	197950967	197951315	789624	5	16,43,170,145,68,	0,730,953,3797,5544,
#Partially deleted in new
chr3	197950556	197954120	chr3:197950556-197954120	0	+	197950967	197954120	789624	4	203,43,153,118,	0,379,602,3446,
#Partially deleted in new
chr3	197950953	197955817	chr3:197950953-197955817	0	+	197950967	197953497	789624	5	25,153,173,145,68,	0,205,2534,3049,4796,
#Partially deleted in new
chr3	197953562	197955851	chr3:197953562-197955851	0	+	197953562	197953562	8553170	2	585,102,	0,2187,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr3	197956640	197960015	chr3:197956640-197960015	0	-	197956640	197956640	8553170	2	3079,171,	0,3204,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	197960199	198043720	chr3:197960199-198043720	1	+	197960221	198038667	789624	16	241,98,31,83,118,179,106,95,118,108,77,133,160,131,211,5154,	0,14177,14842,15829,16398,20126,23743,25596,30359,35975,39066,59053,61246,64458,75633,78367,
#Partially deleted in new
chr3	197960199	198038697	chr3:197960199-198038697	1	+	197960256	198038667	789624	17	120,98,31,83,118,179,106,95,118,108,77,111,133,160,131,211,131,	0,14177,14842,15829,16398,20126,23743,25596,30359,35975,39066,42815,59053,61246,64458,75633,78367,
#Partially deleted in new
chr3	197960201	197980446	chr3:197960201-197980446	0	+	197960221	197980446	789624	6	23,98,31,83,118,121,	0,14175,14840,15827,16396,20124,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr3	197960216	198042095	chr3:197960216-198042095	0	+	197960216	197960216	8553170	16	224,98,31,687,179,106,95,118,108,77,111,133,160,131,211,3529,	0,14160,14825,15812,20109,23726,25579,30342,35958,39049,42798,59036,61229,64441,75616,78350,
#Partially deleted in new
chr3	197960221	198039011	chr3:197960221-198039011	3	+	197960221	198038667	789624	17	219,98,31,83,118,179,106,95,118,108,77,111,133,160,131,211,445,	0,14155,14820,15807,16376,20104,23721,25574,30337,35953,39044,42793,59031,61224,64436,75611,78345,
#Partially deleted in new
chr3	197960256	198038667	chr3:197960256-198038667	1	+	197960256	198038667	789624	16	63,98,31,83,118,179,106,95,118,108,77,133,160,131,211,101,	0,14120,14785,15772,16341,20069,23686,25539,30302,35918,39009,58996,61189,64401,75576,78310,
#Partially deleted in new
chr3	197976586	197980746	chr3:197976586-197980746	0	+	197976586	197976586	8553170	2	129,421,	0,3739,
#Partially deleted in new
chr3	197980318	197999296	chr3:197980318-197999296	0	+	197980318	197980318	8553170	6	186,106,95,118,108,31,	0,3624,5477,10240,15856,18947,
#Partially deleted in new
chr3	197985650	197996540	chr3:197985650-197996540	0	+	197985650	197985650	8553170	3	240,118,366,	0,4908,10524,
#Partially deleted in new
chr3	197985759	198019385	chr3:197985759-198019385	0	+	197985759	197985759	8553170	5	131,118,108,77,133,	0,4799,10415,13506,33493,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr3	197990613	197999742	chr3:197990613-197999742	0	+	197990613	197990613	8553170	3	63,108,477,	0,5561,8652,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr3	197994600	197994709	chr3:197994600-197994709	3	+	197994600	197994600	8553170	1	109,	0,
#Partially deleted in new
chr3	198038320	198039234	chr3:198038320-198039234	3	-	198038320	198038320	789624	3	343,111,88,	0,427,826,
#Partially deleted in new
chr3	198053521	198080512	chr3:198053521-198080512	7	-	198053521	198053521	16724991	10	115,152,912,71,54,67,75,217,115,197,	0,2900,4930,10196,12231,16601,19234,23274,23652,26794,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr3	198057530	198080671	chr3:198057530-198080671	4	-	198057530	198057530	16724991	10	1831,71,54,54,57,67,75,217,115,356,	0,6187,8222,9910,11729,12592,15225,19265,19643,22785,
#Partially deleted in new
chr3	198058052	198080720	chr3:198058052-198080720	5	-	198058052	198058052	16724991	6	1309,71,54,217,115,405,	0,5665,7700,18743,19121,22263,
#Deleted in new
chr3	198059249	198064022	chr3:198059249-198064022	4	-	198059249	198059249	16724991	2	112,305,	0,4468,
#Deleted in new
chr3	198071310	198071417	chr3:198071310-198071417	3	-	198071310	198071310	8553170	1	107,	0,
#Deleted in new
chr3	198110111	198111566	chr3:198110111-198111566	5	+	198110111	198110111	16724991	3	272,89,198,	0,532,1257,
#Deleted in new
chr3	198110111	198110938	chr3:198110111-198110938	5	+	198110111	198110111	16724991	2	272,295,	0,532,
#Deleted in new
chr3	198110123	198111420	chr3:198110123-198111420	4	+	198110123	198110123	16724991	2	260,52,	0,1245,
#Deleted in new
chr3	198110205	198111878	chr3:198110205-198111878	7	+	198110205	198110205	16724991	4	178,86,78,510,	0,441,756,1163,
#Deleted in new
chr3	198119720	198120778	chr3:198119720-198120778	7	+	198119720	198119720	16724991	1	1058,	0,
#Deleted in new
chr3	198121478	198123232	chr3:198121478-198123232	7	-	198121478	198121478	16724991	5	178,52,109,255,181,	0,549,1058,1251,1573,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr3	198153286	198170059	chr3:198153286-198170059	5	+	198153286	198153286	16724991	4	123,547,196,275,	0,3836,14389,16498,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr3	198167738	198222513	chr3:198167738-198222513	7	+	198167738	198167738	16724991	15	133,110,132,216,66,59,530,65,124,98,197,65,191,58,4039,	0,13016,14188,17610,18710,20933,22098,31207,40525,42532,42966,44007,48333,50585,50736,
#Partially deleted in new
chr3	198180754	198190365	chr3:198180754-198190365	5	+	198180754	198180754	16724991	5	110,66,59,93,77,	0,5694,7917,9082,9534,
#Deleted in new
chr3	198196745	198196849	chr3:198196745-198196849	3	+	198196745	198196745	8553170	1	104,	0,
#Deleted in new
chr3	198223496	198226310	chr3:198223496-198226310	7	-	198223496	198223496	16724991	2	939,1790,	0,1024,
#Deleted in new
chr3	198228193	198228376	chr3:198228193-198228376	7	+	198228193	198228193	16724991	1	183,	0,
#Deleted in new
chr3_GL383526v1_alt	47808	68591	chr3_GL383526v1_alt:47808-68591	3	+	47808	47808	8553170	3	99,169,312,	0,5533,20471,
#Deleted in new
chr3_GL383526v1_alt	155088	180671	chr3_GL383526v1_alt:155088-180671	0	+	155208	165289	789624	4	258,70,172,2507,	0,10177,11593,23076,
#Deleted in new
chr3_GL383526v1_alt	155099	178939	chr3_GL383526v1_alt:155099-178939	3	+	155208	178767	789624	5	247,223,70,172,775,	0,6719,10166,11582,23065,
#Deleted in new
chr3_GL383526v1_alt	172615	176304	chr3_GL383526v1_alt:172615-176304	3	-	172615	172615	8553170	2	69,60,	0,3629,
#Deleted in new
chr3_GL383526v1_alt	172643	176304	chr3_GL383526v1_alt:172643-176304	0	-	172643	172643	8553170	2	41,60,	0,3601,
#Deleted in new
chr3_JH636055v2_alt	33412	33710	chr3_JH636055v2_alt:33412-33710	3	+	33412	33412	8553170	1	298,	0,
#Deleted in new
chr3_JH636055v2_alt	74184	79971	chr3_JH636055v2_alt:74184-79971	7	-	74184	74184	16724991	3	69,410,149,	0,4981,5638,
#Deleted in new
chr3_JH636055v2_alt	75732	76864	chr3_JH636055v2_alt:75732-76864	7	+	75732	75732	16724991	3	78,63,210,	0,828,922,
#Deleted in new
chr3_JH636055v2_alt	85252	86487	chr3_JH636055v2_alt:85252-86487	7	-	85252	85252	16724991	2	132,150,	0,1085,
#Deleted in new
chr3_JH636055v2_alt	94918	128746	chr3_JH636055v2_alt:94918-128746	7	-	94918	94918	16724991	17	110,115,109,116,101,147,74,120,65,110,111,132,135,144,36,108,94,	0,377,4698,6051,6536,7481,7927,8445,9927,10593,17789,20114,21575,22898,32991,33263,33734,
#Deleted in new
chr3_JH636055v2_alt	107361	107635	chr3_JH636055v2_alt:107361-107635	7	+	107361	107361	16724991	1	274,	0,
#Deleted in new
chr3_JH636055v2_alt	141499	171227	chr3_JH636055v2_alt:141499-171227	0	+	141782	171227	789624	5	418,183,93,151,146,	0,2708,7605,17055,29582,
#Deleted in new
chr3_JH636055v2_alt	141526	158663	chr3_JH636055v2_alt:141526-158663	0	+	141782	155312	789624	6	391,183,93,149,153,109,	0,2681,7578,13741,16018,17028,
#Deleted in new
chr3_JH636055v2_alt	141533	155393	chr3_JH636055v2_alt:141533-155393	0	+	141782	143511	789624	5	384,206,183,93,126,	0,1789,2674,7571,13734,
#Deleted in new
chr3_JH636055v2_alt	141537	171227	chr3_JH636055v2_alt:141537-171227	3	+	141782	155312	789624	6	380,183,93,149,151,146,	0,2670,7567,13730,17017,29544,
#Deleted in new
chr3_JH636055v2_alt	141554	144880	chr3_JH636055v2_alt:141554-144880	0	+	141554	141554	8553170	2	363,673,	0,2653,
#Deleted in new
chr3_JH636055v2_alt	141573	143511	chr3_JH636055v2_alt:141573-143511	3	+	141782	143511	789624	2	344,189,	0,1749,
#Deleted in new
chr3_JH636055v2_alt	141639	171227	chr3_JH636055v2_alt:141639-171227	0	+	141782	171227	789624	5	278,183,93,151,146,	0,2568,7465,16915,29442,
#Deleted in new
chr3_JH636055v2_alt	141646	171227	chr3_JH636055v2_alt:141646-171227	0	+	141782	171227	789624	5	271,183,93,151,146,	0,2561,7458,16908,29435,
#Deleted in new
chr3_JH636055v2_alt	158508	171331	chr3_JH636055v2_alt:158508-171331	0	+	158508	158508	8553170	3	197,88,250,	0,3105,12573,
#Deleted in new
chr3_JH636055v2_alt	171081	171339	chr3_JH636055v2_alt:171081-171339	0	+	171081	171248	789624	1	258,	0,
#Deleted in new
chr3_KI270777v1_alt	1180	9497	chr3_KI270777v1_alt:1180-9497	3	+	1180	5872	789624	5	100,91,121,153,3811,	0,193,3144,3963,4506,
#Deleted in new
chr3_KI270777v1_alt	1180	5872	chr3_KI270777v1_alt:1180-5872	0	+	1180	5872	789624	5	100,91,121,153,186,	0,193,3144,3963,4506,
#Deleted in new
chr3_KI270777v1_alt	1180	4408	chr3_KI270777v1_alt:1180-4408	0	+	1180	4408	789624	3	100,91,84,	0,193,3144,
#Deleted in new
chr3_KI270777v1_alt	1180	3548	chr3_KI270777v1_alt:1180-3548	0	+	1180	1180	8553170	2	100,2175,	0,193,
#Deleted in new
chr3_KI270777v1_alt	1180	6375	chr3_KI270777v1_alt:1180-6375	0	+	1180	5872	789624	5	100,91,121,153,689,	0,193,3144,3963,4506,
#Deleted in new
chr3_KI270777v1_alt	1373	4418	chr3_KI270777v1_alt:1373-4418	0	+	1373	1388	8553170	2	91,94,	0,2951,
#Deleted in new
chr3_KI270777v1_alt	4148	5490	chr3_KI270777v1_alt:4148-5490	0	+	4148	4148	8553170	2	297,347,	0,995,
#Deleted in new
chr3_KI270777v1_alt	4207	6014	chr3_KI270777v1_alt:4207-6014	0	+	4207	4207	8553170	3	238,153,328,	0,936,1479,
#Deleted in new
chr3_KI270777v1_alt	24215	56258	chr3_KI270777v1_alt:24215-56258	0	-	24215	24215	8553170	5	2497,105,68,210,226,	0,3003,4644,17248,31817,
#Deleted in new
chr3_KI270777v1_alt	24217	163780	chr3_KI270777v1_alt:24217-163780	3	-	25098	163227	789624	5	949,150,40,1134,80,	0,131279,136553,137927,139483,
#Deleted in new
chr3_KI270777v1_alt	25494	163815	chr3_KI270777v1_alt:25494-163815	1	-	26569	163227	789624	15	1218,105,68,210,155,90,75,130,153,161,57,146,40,1134,115,	0,1724,3365,15969,30538,38590,61830,65128,68709,106793,110280,130006,135276,136650,138206,
#Deleted in new
chr3_KI270777v1_alt	25494	164217	chr3_KI270777v1_alt:25494-164217	1	-	26569	163227	789624	15	1218,105,68,210,155,90,75,130,153,161,57,146,40,1134,233,	0,1724,3365,15969,30538,38590,61830,65128,68709,106793,110280,130006,135276,136650,138490,
#Deleted in new
chr3_KI270777v1_alt	25494	163804	chr3_KI270777v1_alt:25494-163804	1	-	27250	163227	789624	15	1218,40,68,210,155,90,75,130,153,161,57,146,40,1134,104,	0,1724,3365,15969,30538,38590,61830,65128,68709,106793,110280,130006,135276,136650,138206,
#Deleted in new
chr3_KI270777v1_alt	163887	165534	chr3_KI270777v1_alt:163887-165534	0	+	163887	163887	8553170	2	261,98,	0,1549,
#Deleted in new
chr3_KI270777v1_alt	163887	164148	chr3_KI270777v1_alt:163887-164148	0	+	163887	163887	8553170	1	261,	0,
#Deleted in new
chr3_KI270777v1_alt	163956	165534	chr3_KI270777v1_alt:163956-165534	0	+	163956	163956	8553170	2	192,123,	0,1455,
#Deleted in new
chr3_KI270777v1_alt	164008	164148	chr3_KI270777v1_alt:164008-164148	3	+	164008	164008	8553170	1	140,	0,
#Deleted in new
chr3_KI270779v1_alt	10486	10957	chr3_KI270779v1_alt:10486-10957	3	+	10486	10486	8553170	1	471,	0,
#Deleted in new
chr3_KI270779v1_alt	20642	21969	chr3_KI270779v1_alt:20642-21969	7	-	20642	20642	16724991	2	322,748,	0,579,
#Deleted in new
chr3_KI270779v1_alt	26061	28424	chr3_KI270779v1_alt:26061-28424	3	-	26061	26061	8553170	3	971,90,623,	0,1076,1740,
#Deleted in new
chr3_KI270779v1_alt	28558	37179	chr3_KI270779v1_alt:28558-37179	1	+	28558	28558	8553170	6	104,86,163,144,165,617,	0,3694,4509,5562,6024,8004,
#Deleted in new
chr3_KI270779v1_alt	28561	59359	chr3_KI270779v1_alt:28561-59359	0	+	28561	28561	789624	14	101,86,163,165,149,123,169,196,170,122,112,131,114,330,	0,3691,4506,6021,8001,10454,13067,14419,15753,19662,23125,23471,25687,30468,
#Deleted in new
chr3_KI270779v1_alt	28561	34606	chr3_KI270779v1_alt:28561-34606	1	+	28561	28561	8553170	5	101,86,163,209,24,	0,3691,4506,5559,6021,
#Deleted in new
chr3_KI270779v1_alt	28569	42288	chr3_KI270779v1_alt:28569-42288	1	+	28569	28569	8553170	7	93,86,163,165,149,123,660,	0,3683,4498,6013,7993,10446,13059,
#Deleted in new
chr3_KI270779v1_alt	28573	56637	chr3_KI270779v1_alt:28573-56637	1	+	28573	28573	8553170	14	89,86,163,144,165,149,123,169,196,170,122,112,131,2389,	0,3679,4494,5547,6009,7989,10442,13055,14407,15741,19650,23113,23459,25675,
#Deleted in new
chr3_KI270779v1_alt	28589	34785	chr3_KI270779v1_alt:28589-34785	0	+	28589	28589	8553170	4	73,86,163,203,	0,3663,4478,5993,
#Deleted in new
chr3_KI270779v1_alt	28592	56401	chr3_KI270779v1_alt:28592-56401	7	+	28592	28592	16724991	15	70,86,163,144,165,149,123,169,196,170,122,112,131,114,87,	0,3660,4475,5528,5990,7970,10423,13036,14388,15722,19631,23094,23440,25656,27722,
#Deleted in new
chr3_KI270779v1_alt	43103	48564	chr3_KI270779v1_alt:43103-48564	0	+	43103	43103	8553170	3	73,170,341,	0,1211,5120,
#Deleted in new
chr3_KI270779v1_alt	46174	82278	chr3_KI270779v1_alt:46174-82278	0	+	46174	46174	8553170	4	7,91,95,216,	0,32500,33069,35888,
#Deleted in new
chr3_KI270779v1_alt	46174	87061	chr3_KI270779v1_alt:46174-87061	1	+	46174	46174	8553170	5	7,89,95,62,177,	0,32502,33069,39343,40710,
#Deleted in new
chr3_KI270779v1_alt	46174	87142	chr3_KI270779v1_alt:46174-87142	0	+	46174	46174	8553170	4	7,91,95,258,	0,32500,33069,40710,
#Deleted in new
chr3_KI270779v1_alt	46174	79673	chr3_KI270779v1_alt:46174-79673	0	+	46174	46174	8553170	3	7,115,430,	0,32476,33069,
#Deleted in new
chr3_KI270779v1_alt	48251	52590	chr3_KI270779v1_alt:48251-52590	0	+	48251	48251	8553170	3	94,112,558,	0,3435,3781,
#Deleted in new
chr3_KI270779v1_alt	48280	66922	chr3_KI270779v1_alt:48280-66922	0	+	48280	48280	8553170	7	65,112,131,114,265,100,65,	0,3406,3752,5968,10749,11555,18577,
#Deleted in new
chr3_KI270779v1_alt	51388	59935	chr3_KI270779v1_alt:51388-59935	0	+	51388	51388	8553170	6	70,112,131,114,265,100,	0,298,644,2860,7641,8447,
#Deleted in new
chr3_KI270779v1_alt	51775	79304	chr3_KI270779v1_alt:51775-79304	1	+	51775	51775	8553170	8	23,131,114,229,178,290,135,61,	0,257,2473,15082,17751,20101,26855,27468,
#Deleted in new
chr3_KI270779v1_alt	52062	56844	chr3_KI270779v1_alt:52062-56844	0	+	52062	52062	8553170	3	101,114,530,	0,2186,4252,
#Deleted in new
chr3_KI270779v1_alt	52099	67021	chr3_KI270779v1_alt:52099-67021	0	+	52099	52099	8553170	5	64,114,122,265,164,	0,2149,4215,6930,14758,
#Deleted in new
chr3_KI270779v1_alt	52112	78727	chr3_KI270779v1_alt:52112-78727	0	+	52112	52112	8553170	6	51,114,122,265,100,97,	0,2136,4202,6917,7723,26518,
#Deleted in new
chr3_KI270779v1_alt	52112	79303	chr3_KI270779v1_alt:52112-79303	0	+	52112	52112	8553170	4	51,114,265,60,	0,2136,6917,27131,
#Deleted in new
chr3_KI270779v1_alt	52112	78822	chr3_KI270779v1_alt:52112-78822	1	+	52112	52112	8553170	7	51,114,122,118,265,100,192,	0,2136,4202,6586,6917,7723,26518,
#Deleted in new
chr3_KI270779v1_alt	52365	59050	chr3_KI270779v1_alt:52365-59050	0	+	52365	52365	8553170	3	349,114,21,	0,1883,6664,
#Deleted in new
chr3_KI270779v1_alt	52484	56868	chr3_KI270779v1_alt:52484-56868	0	+	52484	52484	8553170	3	230,114,554,	0,1764,3830,
#Deleted in new
chr3_KI270779v1_alt	52867	56757	chr3_KI270779v1_alt:52867-56757	0	+	52867	52867	8553170	3	51,114,443,	0,1381,3447,
#Deleted in new
chr3_KI270779v1_alt	53956	56837	chr3_KI270779v1_alt:53956-56837	0	+	53956	53956	8553170	2	406,523,	0,2358,
#Deleted in new
chr3_KI270779v1_alt	54246	79001	chr3_KI270779v1_alt:54246-79001	0	+	54246	54246	8553170	4	116,122,265,371,	0,2068,4783,24384,
#Deleted in new
chr3_KI270779v1_alt	54246	78765	chr3_KI270779v1_alt:54246-78765	0	+	54246	54246	8553170	5	116,115,265,100,135,	0,2854,4783,5589,24384,
#Deleted in new
chr3_KI270779v1_alt	54250	79001	chr3_KI270779v1_alt:54250-79001	0	+	54250	54250	8553170	4	112,265,121,371,	0,4779,23252,24380,
#Deleted in new
chr3_KI270779v1_alt	54269	79298	chr3_KI270779v1_alt:54269-79298	0	+	54269	54269	8553170	6	93,265,229,178,135,55,	0,4760,12588,15257,24361,24974,
#Deleted in new
chr3_KI270779v1_alt	54273	57215	chr3_KI270779v1_alt:54273-57215	0	+	54273	54273	8553170	4	89,122,92,112,	0,2041,2521,2830,
#Deleted in new
chr3_KI270779v1_alt	54329	78842	chr3_KI270779v1_alt:54329-78842	0	+	54329	54329	8553170	3	33,265,212,	0,4700,24301,
#Deleted in new
chr3_KI270779v1_alt	56317	79304	chr3_KI270779v1_alt:56317-79304	0	+	56317	56317	8553170	6	127,265,100,63,135,61,	0,2712,3518,3725,22313,22926,
#Deleted in new
chr3_KI270779v1_alt	56417	79333	chr3_KI270779v1_alt:56417-79333	1	+	56417	56417	8553170	5	19,92,118,265,90,	0,377,2281,2612,22826,
#Deleted in new
chr3_KI270779v1_alt	56708	59267	chr3_KI270779v1_alt:56708-59267	1	+	56708	56708	8553170	4	136,187,122,238,	0,220,1986,2321,
#Deleted in new
chr3_KI270779v1_alt	56799	71904	chr3_KI270779v1_alt:56799-71904	1	+	56799	56799	8553170	6	45,112,265,229,178,28,	0,304,2230,10058,12727,15077,
#Deleted in new
chr3_KI270779v1_alt	56811	79298	chr3_KI270779v1_alt:56811-79298	1	+	56811	56811	8553170	8	75,128,265,100,178,53,302,55,	0,1877,2218,3024,12715,15065,21819,22432,
#Deleted in new
chr3_KI270779v1_alt	56913	72011	chr3_KI270779v1_alt:56913-72011	0	+	56913	56913	8553170	4	202,265,178,135,	0,2116,12613,14963,
#Deleted in new
chr3_KI270779v1_alt	58317	72081	chr3_KI270779v1_alt:58317-72081	1	+	58317	58317	8553170	6	499,265,100,229,178,205,	0,712,1518,8540,11209,13559,
#Deleted in new
chr3_KI270779v1_alt	58317	69667	chr3_KI270779v1_alt:58317-69667	0	+	58317	58317	8553170	4	499,265,100,141,	0,712,1518,11209,
#Deleted in new
chr3_KI270779v1_alt	58607	66976	chr3_KI270779v1_alt:58607-66976	0	+	58607	58607	8553170	2	687,119,	0,8250,
#Deleted in new
chr3_KI270779v1_alt	58863	67038	chr3_KI270779v1_alt:58863-67038	0	+	58863	58863	8553170	3	431,100,181,	0,972,7994,
#Deleted in new
chr3_KI270779v1_alt	58880	82186	chr3_KI270779v1_alt:58880-82186	0	+	58880	58880	789624	5	414,100,135,95,124,	0,955,19750,20363,23182,
#Deleted in new
chr3_KI270779v1_alt	58922	69613	chr3_KI270779v1_alt:58922-69613	0	+	58922	58922	8553170	5	372,100,63,229,87,	0,913,1120,7935,10604,
#Deleted in new
chr3_KI270779v1_alt	59017	79304	chr3_KI270779v1_alt:59017-79304	0	+	59017	59017	8553170	5	277,100,178,302,61,	0,818,10509,19613,20226,
#Deleted in new
chr3_KI270779v1_alt	59044	79304	chr3_KI270779v1_alt:59044-79304	0	+	59044	59044	8553170	5	250,110,290,135,61,	0,10550,12832,19586,20199,
#Deleted in new
chr3_KI270779v1_alt	59078	78965	chr3_KI270779v1_alt:59078-78965	0	+	59078	59078	8553170	3	216,178,335,	0,10448,19552,
#Deleted in new
chr3_KI270779v1_alt	59143	82167	chr3_KI270779v1_alt:59143-82167	0	+	59143	59143	8553170	4	151,135,95,105,	0,19487,20100,22919,
#Deleted in new
chr3_KI270779v1_alt	59147	79274	chr3_KI270779v1_alt:59147-79274	1	+	59147	59147	8553170	4	147,100,63,644,	0,688,895,19483,
#Deleted in new
chr3_KI270779v1_alt	59166	79304	chr3_KI270779v1_alt:59166-79304	0	+	59166	59166	8553170	4	128,178,302,61,	0,10360,19464,20077,
#Deleted in new
chr3_KI270779v1_alt	59178	79304	chr3_KI270779v1_alt:59178-79304	0	+	59178	59178	8553170	5	116,100,178,116,674,	0,657,10348,12698,19452,
#Deleted in new
chr3_KI270779v1_alt	59252	79303	chr3_KI270779v1_alt:59252-79303	1	+	59252	59252	8553170	6	42,100,229,149,302,60,	0,583,7605,10274,19378,19991,
#Deleted in new
chr3_KI270779v1_alt	59254	79304	chr3_KI270779v1_alt:59254-79304	1	+	59254	59254	8553170	6	40,178,116,82,254,61,	0,10272,12622,12830,19376,19989,
#Deleted in new
chr3_KI270779v1_alt	59276	79304	chr3_KI270779v1_alt:59276-79304	0	+	59276	59276	8553170	6	18,100,229,178,116,61,	0,559,7581,10250,12600,19967,
#Deleted in new
chr3_KI270779v1_alt	59833	69811	chr3_KI270779v1_alt:59833-69811	0	+	59833	59833	8553170	3	102,229,285,	0,7024,9693,
#Deleted in new
chr3_KI270779v1_alt	59847	79304	chr3_KI270779v1_alt:59847-79304	0	+	59847	59847	8553170	6	88,229,178,53,302,61,	0,7010,9679,12029,18783,19396,
#Deleted in new
chr3_KI270779v1_alt	59871	82372	chr3_KI270779v1_alt:59871-82372	0	+	59871	59871	8553170	4	64,135,95,310,	0,18759,19372,22191,
#Deleted in new
chr3_KI270779v1_alt	59874	79304	chr3_KI270779v1_alt:59874-79304	0	+	59874	59874	8553170	5	61,63,135,85,61,	0,168,18756,19051,19369,
#Deleted in new
chr3_KI270779v1_alt	59894	79304	chr3_KI270779v1_alt:59894-79304	1	+	59894	59894	8553170	4	41,178,121,674,	0,9632,17608,18736,
#Deleted in new
chr3_KI270779v1_alt	59910	79199	chr3_KI270779v1_alt:59910-79199	0	+	59910	59910	8553170	3	25,178,569,	0,9616,18720,
#Deleted in new
chr3_KI270779v1_alt	59921	67051	chr3_KI270779v1_alt:59921-67051	0	+	59921	59921	8553170	2	184,194,	0,6936,
#Deleted in new
chr3_KI270779v1_alt	63846	79304	chr3_KI270779v1_alt:63846-79304	0	+	63846	63846	8553170	3	146,135,61,	0,14784,15397,
#Deleted in new
chr3_KI270779v1_alt	66933	79001	chr3_KI270779v1_alt:66933-79001	0	+	66933	66933	8553170	3	153,178,371,	0,2593,11697,
#Deleted in new
chr3_KI270779v1_alt	66998	79306	chr3_KI270779v1_alt:66998-79306	0	+	66998	66998	8553170	6	88,178,290,135,85,63,	0,2528,4878,11632,11927,12245,
#Deleted in new
chr3_KI270779v1_alt	69142	72118	chr3_KI270779v1_alt:69142-72118	0	+	69142	69142	8553170	2	562,242,	0,2734,
#Deleted in new
chr3_KI270779v1_alt	69159	79304	chr3_KI270779v1_alt:69159-79304	0	+	69159	69159	8553170	2	545,61,	0,10084,
#Deleted in new
chr3_KI270779v1_alt	69535	78867	chr3_KI270779v1_alt:69535-78867	1	+	69535	69535	8553170	4	169,290,260,237,	0,2341,3144,9095,
#Deleted in new
chr3_KI270779v1_alt	69579	79271	chr3_KI270779v1_alt:69579-79271	0	+	69579	69579	8553170	4	125,290,302,28,	0,2297,9051,9664,
#Deleted in new
chr3_KI270779v1_alt	69644	82178	chr3_KI270779v1_alt:69644-82178	0	+	69644	69644	8553170	4	60,254,95,116,	0,8986,9599,12418,
#Deleted in new
chr3_KI270779v1_alt	70817	82372	chr3_KI270779v1_alt:70817-82372	1	+	70817	70817	8553170	3	1349,704,310,	0,7817,11245,
#Deleted in new
chr3_KI270779v1_alt	71619	79257	chr3_KI270779v1_alt:71619-79257	0	+	71619	71619	8553170	3	547,302,14,	0,7011,7624,
#Deleted in new
chr3_KI270779v1_alt	71935	79304	chr3_KI270779v1_alt:71935-79304	0	+	71935	71935	8553170	4	231,98,302,61,	0,5590,6695,7308,
#Deleted in new
chr3_KI270779v1_alt	72053	95234	chr3_KI270779v1_alt:72053-95234	0	+	72053	72053	8553170	5	113,302,95,170,58,	0,6577,7190,16470,23123,
#Deleted in new
chr3_KI270779v1_alt	72135	93239	chr3_KI270779v1_alt:72135-93239	0	+	72135	72135	8553170	4	31,135,95,242,	0,6495,7108,20862,
#Deleted in new
chr3_KI270779v1_alt	76157	79301	chr3_KI270779v1_alt:76157-79301	0	+	76157	76157	8553170	2	75,671,	0,2473,
#Deleted in new
chr3_KI270779v1_alt	76634	79304	chr3_KI270779v1_alt:76634-79304	0	+	76634	76634	8553170	2	174,674,	0,1996,
#Deleted in new
chr3_KI270779v1_alt	77191	79304	chr3_KI270779v1_alt:77191-79304	0	+	77191	77191	8553170	3	432,302,61,	0,1439,2052,
#Deleted in new
chr3_KI270779v1_alt	78643	82372	chr3_KI270779v1_alt:78643-82372	0	+	78643	78643	8553170	3	289,95,310,	0,600,3419,
#Deleted in new
chr3_KI270779v1_alt	78650	103809	chr3_KI270779v1_alt:78650-103809	0	+	78650	78650	8553170	4	115,85,95,163,	0,275,593,24996,
#Deleted in new
chr3_KI270779v1_alt	78650	94798	chr3_KI270779v1_alt:78650-94798	0	+	78650	78650	8553170	4	282,95,318,55,	0,593,14347,16093,
#Deleted in new
chr3_KI270779v1_alt	78650	95264	chr3_KI270779v1_alt:78650-95264	0	+	78650	78650	8553170	4	282,95,318,88,	0,593,14347,16526,
#Deleted in new
chr3_KI270779v1_alt	78650	104048	chr3_KI270779v1_alt:78650-104048	0	+	78650	78650	8553170	2	688,402,	0,24996,
#Deleted in new
chr3_KI270779v1_alt	78650	88506	chr3_KI270779v1_alt:78650-88506	0	+	78650	78650	8553170	3	282,95,96,	0,593,9760,
#Deleted in new
chr3_KI270779v1_alt	78650	100032	chr3_KI270779v1_alt:78650-100032	0	+	78650	78650	8553170	3	282,95,193,	0,593,21189,
#Deleted in new
chr3_KI270779v1_alt	78650	87170	chr3_KI270779v1_alt:78650-87170	0	+	78650	78650	8553170	3	234,95,286,	0,593,8234,
#Deleted in new
chr3_KI270779v1_alt	78650	93209	chr3_KI270779v1_alt:78650-93209	0	+	78650	78650	8553170	4	115,95,170,212,	0,593,9873,14347,
#Deleted in new
chr3_KI270779v1_alt	78650	103757	chr3_KI270779v1_alt:78650-103757	0	+	78650	78650	8553170	5	234,95,170,92,111,	0,593,9873,21494,24996,
#Deleted in new
chr3_KI270779v1_alt	78650	87171	chr3_KI270779v1_alt:78650-87171	0	+	78650	78650	8553170	4	115,85,95,287,	0,275,593,8234,
#Deleted in new
chr3_KI270779v1_alt	78650	104048	chr3_KI270779v1_alt:78650-104048	0	+	78650	78650	8553170	4	115,95,92,402,	0,593,21494,24996,
#Deleted in new
chr3_KI270779v1_alt	78650	103741	chr3_KI270779v1_alt:78650-103741	0	+	78650	78650	8553170	4	282,95,283,95,	0,593,9760,24996,
#Deleted in new
chr3_KI270779v1_alt	78650	87467	chr3_KI270779v1_alt:78650-87467	0	+	78650	78650	8553170	3	115,95,583,	0,593,8234,
#Deleted in new
chr3_KI270779v1_alt	78650	103875	chr3_KI270779v1_alt:78650-103875	1	+	78650	78650	8553170	5	115,95,209,92,229,	0,593,21189,21494,24996,
#Deleted in new
chr3_KI270779v1_alt	78650	88275	chr3_KI270779v1_alt:78650-88275	0	+	78650	78650	8553170	2	688,267,	0,9358,
#Deleted in new
chr3_KI270779v1_alt	78650	88236	chr3_KI270779v1_alt:78650-88236	0	+	78650	78650	8553170	4	115,85,95,228,	0,275,593,9358,
#Deleted in new
chr3_KI270779v1_alt	78650	95297	chr3_KI270779v1_alt:78650-95297	0	+	78650	78650	8553170	4	115,95,318,121,	0,593,14347,16526,
#Deleted in new
chr3_KI270779v1_alt	78650	88243	chr3_KI270779v1_alt:78650-88243	0	+	78650	78650	8553170	2	688,176,	0,9417,
#Deleted in new
chr3_KI270779v1_alt	78650	95684	chr3_KI270779v1_alt:78650-95684	0	+	78650	78650	8553170	3	115,95,508,	0,593,16526,
#Deleted in new
chr3_KI270779v1_alt	78650	103843	chr3_KI270779v1_alt:78650-103843	0	+	78650	78650	8553170	4	282,95,92,197,	0,593,21494,24996,
#Deleted in new
chr3_KI270779v1_alt	78650	87308	chr3_KI270779v1_alt:78650-87308	1	+	78650	78650	8553170	3	688,53,54,	0,8234,8604,
#Deleted in new
chr3_KI270779v1_alt	78650	80060	chr3_KI270779v1_alt:78650-80060	0	+	78650	78650	8553170	2	115,817,	0,593,
#Deleted in new
chr3_KI270779v1_alt	78650	82620	chr3_KI270779v1_alt:78650-82620	0	+	78650	78650	8553170	2	688,26,	0,3944,
#Deleted in new
chr3_KI270779v1_alt	78650	79716	chr3_KI270779v1_alt:78650-79716	0	+	78650	78650	8553170	3	115,85,473,	0,275,593,
#Deleted in new
chr3_KI270779v1_alt	78650	87167	chr3_KI270779v1_alt:78650-87167	0	+	78650	78650	8553170	3	115,95,398,	0,593,8119,
#Deleted in new
chr3_KI270779v1_alt	78650	88152	chr3_KI270779v1_alt:78650-88152	0	+	78650	78650	8553170	3	360,95,144,	0,593,9358,
#Deleted in new
chr3_KI270779v1_alt	78650	82266	chr3_KI270779v1_alt:78650-82266	0	+	78650	78650	8553170	3	360,95,204,	0,593,3412,
#Deleted in new
chr3_KI270779v1_alt	78650	80084	chr3_KI270779v1_alt:78650-80084	1	+	78650	78650	8553170	2	282,841,	0,593,
#Deleted in new
chr3_KI270779v1_alt	78650	82236	chr3_KI270779v1_alt:78650-82236	0	+	78650	78650	8553170	3	234,95,174,	0,593,3412,
#Deleted in new
chr3_KI270779v1_alt	78650	95527	chr3_KI270779v1_alt:78650-95527	0	+	78650	78650	8553170	3	282,95,351,	0,593,16526,
#Deleted in new
chr3_KI270779v1_alt	78650	88229	chr3_KI270779v1_alt:78650-88229	2	+	78650	78650	8553170	3	282,95,221,	0,593,9358,
#Deleted in new
chr3_KI270779v1_alt	78650	87086	chr3_KI270779v1_alt:78650-87086	0	+	78650	78650	8553170	3	282,95,202,	0,593,8234,
#Deleted in new
chr3_KI270779v1_alt	78650	79883	chr3_KI270779v1_alt:78650-79883	0	+	78650	78650	8553170	2	234,640,	0,593,
#Deleted in new
chr3_KI270779v1_alt	78650	82269	chr3_KI270779v1_alt:78650-82269	0	+	78650	78650	8553170	4	115,127,95,207,	0,275,593,3412,
#Deleted in new
chr3_KI270779v1_alt	78651	95315	chr3_KI270779v1_alt:78651-95315	0	+	78651	78651	8553170	4	114,95,173,139,	0,592,9869,16525,
#Deleted in new
chr3_KI270779v1_alt	78654	93145	chr3_KI270779v1_alt:78654-93145	1	+	78654	78654	8553170	5	111,85,95,173,148,	0,271,589,9866,14343,
#Deleted in new
chr3_KI270779v1_alt	78658	95519	chr3_KI270779v1_alt:78658-95519	1	+	78658	78658	8553170	4	107,95,153,343,	0,585,9882,16518,
#Deleted in new
chr3_KI270779v1_alt	78674	87121	chr3_KI270779v1_alt:78674-87121	0	+	78674	78674	8553170	4	258,95,62,237,	0,569,6843,8210,
#Deleted in new
chr3_KI270779v1_alt	78674	88616	chr3_KI270779v1_alt:78674-88616	0	+	78674	78674	8553170	3	210,95,206,	0,569,9736,
#Deleted in new
chr3_KI270779v1_alt	78674	88274	chr3_KI270779v1_alt:78674-88274	0	+	78674	78674	8553170	3	91,95,207,	0,569,9393,
#Deleted in new
chr3_KI270779v1_alt	78674	103693	chr3_KI270779v1_alt:78674-103693	1	+	78674	78674	8553170	5	258,95,283,92,47,	0,569,9736,21470,24972,
#Deleted in new
chr3_KI270779v1_alt	78674	95552	chr3_KI270779v1_alt:78674-95552	1	+	78674	78674	8553170	4	210,95,170,376,	0,569,9849,16502,
#Deleted in new
chr3_KI270779v1_alt	78674	89384	chr3_KI270779v1_alt:78674-89384	0	+	78674	78674	8553170	4	91,95,173,285,	0,569,9846,10425,
#Deleted in new
chr3_KI270779v1_alt	78674	89172	chr3_KI270779v1_alt:78674-89172	0	+	78674	78674	8553170	4	91,95,283,73,	0,569,9736,10425,
#Deleted in new
chr3_KI270779v1_alt	78674	82290	chr3_KI270779v1_alt:78674-82290	1	+	78674	78674	8553170	3	91,413,228,	0,251,3388,
#Deleted in new
chr3_KI270779v1_alt	78674	92536	chr3_KI270779v1_alt:78674-92536	0	+	78674	78674	8553170	3	91,95,325,	0,569,13537,
#Deleted in new
chr3_KI270779v1_alt	78674	89507	chr3_KI270779v1_alt:78674-89507	0	+	78674	78674	8553170	2	664,408,	0,10425,
#Deleted in new
chr3_KI270779v1_alt	78674	79769	chr3_KI270779v1_alt:78674-79769	0	+	78674	78674	8553170	3	258,95,289,	0,569,806,
#Deleted in new
chr3_KI270779v1_alt	78674	87143	chr3_KI270779v1_alt:78674-87143	0	+	78674	78674	8553170	4	91,95,62,259,	0,569,6843,8210,
#Deleted in new
chr3_KI270779v1_alt	78674	95373	chr3_KI270779v1_alt:78674-95373	0	+	78674	78674	8553170	4	91,85,95,197,	0,251,569,16502,
#Deleted in new
chr3_KI270779v1_alt	78674	82372	chr3_KI270779v1_alt:78674-82372	0	+	78674	78674	8553170	3	91,85,287,	0,251,3411,
#Deleted in new
chr3_KI270779v1_alt	78674	88277	chr3_KI270779v1_alt:78674-88277	0	+	78674	78674	8553170	3	91,95,269,	0,569,9334,
#Deleted in new
chr3_KI270779v1_alt	78674	88222	chr3_KI270779v1_alt:78674-88222	0	+	78674	78674	8553170	3	210,95,214,	0,569,9334,
#Deleted in new
chr3_KI270779v1_alt	78679	110461	chr3_KI270779v1_alt:78679-110461	0	+	78679	78679	8553170	3	253,95,118,	0,564,31664,
#Deleted in new
chr3_KI270779v1_alt	78681	103852	chr3_KI270779v1_alt:78681-103852	0	+	78681	78681	8553170	4	84,95,283,206,	0,562,9729,24965,
#Deleted in new
chr3_KI270779v1_alt	78702	88693	chr3_KI270779v1_alt:78702-88693	0	+	78702	78702	8553170	3	182,95,283,	0,541,9708,
#Deleted in new
chr3_KI270779v1_alt	78738	95250	chr3_KI270779v1_alt:78738-95250	1	+	78738	78738	8553170	3	600,318,74,	0,14259,16438,
#Deleted in new
chr3_KI270779v1_alt	78746	104046	chr3_KI270779v1_alt:78746-104046	0	+	78746	78746	8553170	3	138,95,400,	0,497,24900,
#Deleted in new
chr3_KI270779v1_alt	78782	105561	chr3_KI270779v1_alt:78782-105561	0	+	78782	78782	8553170	3	150,95,309,	0,461,26470,
#Deleted in new
chr3_KI270779v1_alt	78784	87169	chr3_KI270779v1_alt:78784-87169	0	+	78784	78784	8553170	2	554,285,	0,8100,
#Deleted in new
chr3_KI270779v1_alt	79079	104003	chr3_KI270779v1_alt:79079-104003	0	+	79079	79079	8553170	3	259,92,357,	0,21065,24567,
#Deleted in new
chr3_KI270779v1_alt	79153	94881	chr3_KI270779v1_alt:79153-94881	0	+	79153	79153	8553170	3	185,173,138,	0,9367,15590,
#Deleted in new
chr3_KI270779v1_alt	79222	105273	chr3_KI270779v1_alt:79222-105273	0	+	79222	79222	8553170	3	116,92,21,	0,20922,26030,
#Deleted in new
chr3_KI270779v1_alt	91378	104048	chr3_KI270779v1_alt:91378-104048	1	+	91504	103715	789624	4	202,1893,92,402,	0,3798,8766,12268,
#Deleted in new
chr3_KI270779v1_alt	91380	105530	chr3_KI270779v1_alt:91380-105530	1	+	91504	105363	789624	4	200,1893,92,278,	0,3796,8764,13872,
#Deleted in new
chr3_KI270779v1_alt	91447	95314	chr3_KI270779v1_alt:91447-95314	0	+	91447	91447	8553170	3	133,318,138,	0,1550,3729,
#Deleted in new
chr3_KI270779v1_alt	91471	95591	chr3_KI270779v1_alt:91471-95591	0	+	91471	91471	8553170	2	109,470,	0,3650,
#Deleted in new
chr3_KI270779v1_alt	94723	104047	chr3_KI270779v1_alt:94723-104047	3	+	95205	103715	789624	4	933,900,92,401,	0,1446,5421,8923,
#Deleted in new
chr3_KI270779v1_alt	94723	104050	chr3_KI270779v1_alt:94723-104050	1	+	95205	103715	789624	3	2346,92,404,	0,5421,8923,
#Deleted in new
chr3_KI270779v1_alt	96677	100619	chr3_KI270779v1_alt:96677-100619	0	+	96677	96677	8553170	2	392,475,	0,3467,
#Deleted in new
chr3_KI270779v1_alt	96866	111620	chr3_KI270779v1_alt:96866-111620	0	+	96866	111484	789624	4	203,92,84,142,	0,3278,13477,14612,
#Deleted in new
chr3_KI270779v1_alt	117261	150260	chr3_KI270779v1_alt:117261-150260	0	-	140831	150260	789624	22	616,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,131,156,165,134,167,	0,2137,4124,4442,5608,6286,7448,10382,12359,14119,14719,15322,16090,16668,17280,18232,18505,22257,23451,24887,27466,32832,
#Deleted in new
chr3_KI270779v1_alt	117261	189677	chr3_KI270779v1_alt:117261-189677	1	-	117672	189637	789624	24	616,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,131,156,165,134,153,122,	0,2137,4124,4442,5608,6286,7448,10382,12359,14119,14719,15322,16090,16668,17280,18232,18505,19898,22257,23451,24887,27466,32846,72294,
#Deleted in new
chr3_KI270779v1_alt	117261	189677	chr3_KI270779v1_alt:117261-189677	1	-	117672	189637	789624	23	616,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,131,156,165,134,122,	0,2137,4124,4442,5608,6286,7448,10382,12359,14119,14719,15322,16090,16668,17280,18232,18505,19898,22257,23451,24887,27466,72294,
#Deleted in new
chr3_KI270779v1_alt	117261	190097	chr3_KI270779v1_alt:117261-190097	1	-	117672	189637	789624	25	616,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,131,156,165,134,153,18726,542,	0,2137,4124,4442,5608,6286,7448,10382,12359,14119,14719,15322,16090,16668,17280,18232,18505,19898,22257,23451,24887,27466,32846,33333,72294,
#Deleted in new
chr3_KI270779v1_alt	117261	150260	chr3_KI270779v1_alt:117261-150260	0	-	140831	150260	789624	22	616,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,131,156,89,134,153,	0,2137,4124,4442,5608,6286,7448,10382,12359,14119,14719,15322,16090,16668,17280,18232,18505,22257,23451,24887,27466,32846,
#Deleted in new
chr3_KI270779v1_alt	117261	189709	chr3_KI270779v1_alt:117261-189709	0	-	123682	189637	789624	24	616,163,224,65,74,180,182,138,234,102,168,91,209,120,126,180,89,131,156,165,134,153,18726,154,	0,2137,4124,4442,5608,6286,10382,12359,14119,14719,15322,16090,16668,17280,18232,18505,19898,22257,23451,24887,27466,32846,33333,72294,
#Deleted in new
chr3_KI270779v1_alt	117261	150260	chr3_KI270779v1_alt:117261-150260	0	-	140831	150260	789624	22	616,163,224,65,74,180,182,138,234,102,168,91,209,120,126,180,89,131,156,89,134,153,	0,2137,4124,4442,5608,6286,10382,12359,14119,14719,15322,16090,16668,17280,18232,18505,19898,22257,23451,24887,27466,32846,
#Deleted in new
chr3_KI270779v1_alt	117261	150260	chr3_KI270779v1_alt:117261-150260	2	-	140831	150260	789624	23	616,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,103,156,89,134,153,	0,2137,4124,4442,5608,6286,7448,10382,12359,14119,14719,15322,16090,16668,17280,18232,18505,19898,22285,23451,24887,27466,32846,
#Deleted in new
chr3_KI270779v1_alt	117261	150260	chr3_KI270779v1_alt:117261-150260	0	-	141376	150260	789624	23	616,163,224,65,74,180,182,138,234,102,168,91,209,120,126,180,89,131,156,209,165,134,167,	0,2137,4124,4442,5608,6286,10382,12359,14119,14719,15322,16090,16668,17280,18232,18505,19898,22257,23451,23913,24887,27466,32832,
#Deleted in new
chr3_KI270779v1_alt	117265	189584	chr3_KI270779v1_alt:117265-189584	1	-	117672	189584	789624	68	612,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,131,156,165,134,153,2987,100,69,729,67,162,657,48,214,238,336,144,76,452,48,76,48,240,89,199,221,87,76,68,124,260,48,91,53,249,39,57,183,75,69,48,144,220,222,38,432,2671,1,11,30,	0,2133,4120,4438,5604,6282,7444,10378,12355,14115,14715,15318,16086,16664,17276,18228,18501,19894,22253,23447,24883,27462,32842,33329,36412,36608,36821,37646,37761,37971,38676,38772,39082,39800,40232,40472,40692,41240,41432,41652,41796,42372,42509,42852,43121,43256,43380,43544,44148,44552,44648,44787,44888,45281,45656,45857,46376,46691,46904,47048,47336,47604,48210,48632,49112,51785,72275,72289,
#Deleted in new
chr3_KI270779v1_alt	117554	189709	chr3_KI270779v1_alt:117554-189709	0	-	140831	189637	789624	25	323,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,131,156,89,134,153,18726,154,	0,1844,3831,4149,5315,5993,7155,10089,12066,13826,14426,15029,15797,16375,16987,17939,18212,19605,21964,23158,24594,27173,32553,33040,72001,
#Deleted in new
chr3_KI270779v1_alt	117554	189709	chr3_KI270779v1_alt:117554-189709	0	-	137216	189637	789624	24	323,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,131,89,134,153,18726,154,	0,1844,3831,4149,5315,5993,7155,10089,12066,13826,14426,15029,15797,16375,16987,17939,18212,19605,21964,24594,27173,32553,33040,72001,
#Deleted in new
chr3_KI270779v1_alt	117554	189709	chr3_KI270779v1_alt:117554-189709	0	-	137182	189637	789624	24	323,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,103,89,134,153,18726,154,	0,1844,3831,4149,5315,5993,7155,10089,12066,13826,14426,15029,15797,16375,16987,17939,18212,19605,21992,24594,27173,32553,33040,72001,
#Deleted in new
chr3_KI270779v1_alt	117554	189709	chr3_KI270779v1_alt:117554-189709	0	-	137216	189637	789624	25	323,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,103,156,165,134,153,18726,154,	0,1844,3831,4149,5315,5993,7155,10089,12066,13826,14426,15029,15797,16375,16987,17939,18212,19605,21992,23158,24594,27173,32553,33040,72001,
#Deleted in new
chr3_KI270779v1_alt	117554	189709	chr3_KI270779v1_alt:117554-189709	0	-	140831	189637	789624	25	323,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,131,156,165,134,167,18726,154,	0,1844,3831,4149,5315,5993,7155,10089,12066,13826,14426,15029,15797,16375,16987,17939,18212,19605,21964,23158,24594,27173,32539,33040,72001,
#Deleted in new
chr3_KI270779v1_alt	117554	189709	chr3_KI270779v1_alt:117554-189709	1	-	117672	189637	789624	24	323,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,131,165,134,153,18726,154,	0,1844,3831,4149,5315,5993,7155,10089,12066,13826,14426,15029,15797,16375,16987,17939,18212,19605,21964,24594,27173,32553,33040,72001,
#Deleted in new
chr3_KI270779v1_alt	117554	189709	chr3_KI270779v1_alt:117554-189709	0	-	140831	189637	789624	23	323,163,224,65,74,154,138,234,102,168,91,209,120,126,180,89,131,156,165,134,167,18726,154,	0,1844,3831,4149,5315,5993,12066,13826,14426,15029,15797,16375,16987,17939,18212,19605,21964,23158,24594,27173,32539,33040,72001,
#Deleted in new
chr3_KI270779v1_alt	117554	189709	chr3_KI270779v1_alt:117554-189709	0	-	137216	189637	789624	24	323,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,103,165,134,153,18726,154,	0,1844,3831,4149,5315,5993,7155,10089,12066,13826,14426,15029,15797,16375,16987,17939,18212,19605,21992,24594,27173,32553,33040,72001,
#Deleted in new
chr3_KI270779v1_alt	117669	124491	chr3_KI270779v1_alt:117669-124491	0	-	117669	117669	8553170	6	208,163,224,65,74,944,	0,1729,3716,4034,5200,5878,
#Deleted in new
chr3_KI270779v1_alt	120352	123017	chr3_KI270779v1_alt:120352-123017	0	-	120352	120352	8553170	2	1257,1314,	0,1351,
#Deleted in new
chr3_KI270779v1_alt	121103	123600	chr3_KI270779v1_alt:121103-123600	0	-	121103	121103	8553170	4	506,65,74,53,	0,600,1766,2444,
#Deleted in new
chr3_KI270779v1_alt	137158	140185	chr3_KI270779v1_alt:137158-140185	0	-	137158	137158	8553170	3	90,131,332,	0,2360,2695,
#Deleted in new
chr3_KI270779v1_alt	187463	189793	chr3_KI270779v1_alt:187463-189793	0	-	187463	187463	8553170	2	687,238,	0,2092,
#Deleted in new
chr3_KI270780v1_alt	37856	38759	chr3_KI270780v1_alt:37856-38759	7	+	37856	37856	16724991	1	903,	0,
#Deleted in new
chr3_KI270780v1_alt	46621	47533	chr3_KI270780v1_alt:46621-47533	7	+	46621	46621	16724991	1	912,	0,
#Deleted in new
chr3_KI270780v1_alt	59048	59945	chr3_KI270780v1_alt:59048-59945	7	+	59048	59048	16724991	1	897,	0,
#Deleted in new
chr3_KI270780v1_alt	68807	69690	chr3_KI270780v1_alt:68807-69690	7	+	68807	68807	16724991	1	883,	0,
#Deleted in new
chr3_KI270780v1_alt	81616	82540	chr3_KI270780v1_alt:81616-82540	7	+	81616	81616	16724991	1	924,	0,
#Deleted in new
chr3_KI270780v1_alt	90567	90923	chr3_KI270780v1_alt:90567-90923	7	+	90567	90567	16724991	1	356,	0,
#Deleted in new
chr3_KI270780v1_alt	135411	136191	chr3_KI270780v1_alt:135411-136191	7	+	135411	135411	16724991	1	780,	0,
#Deleted in new
chr3_KI270781v1_alt	24939	28226	chr3_KI270781v1_alt:24939-28226	3	-	24939	24939	8553170	2	660,67,	0,3220,
#Deleted in new
chr3_KI270781v1_alt	93680	111782	chr3_KI270781v1_alt:93680-111782	3	-	93680	93680	8553170	2	405,424,	0,17678,
#Deleted in new
chr3_KI270781v1_alt	111537	111782	chr3_KI270781v1_alt:111537-111782	0	-	111537	111537	8553170	1	245,	0,
#Deleted in new
chr3_KI270782v1_alt	2834	53621	chr3_KI270782v1_alt:2834-53621	3	+	12439	46988	789624	7	268,126,73,111,142,153,7103,	0,9562,22487,23526,33267,41632,43684,
#Deleted in new
chr3_KI270782v1_alt	2895	49100	chr3_KI270782v1_alt:2895-49100	1	+	12439	46988	789624	8	207,152,126,73,111,142,153,2582,	0,1274,9501,22426,23465,33206,41571,43623,
#Deleted in new
chr3_KI270782v1_alt	2895	47289	chr3_KI270782v1_alt:2895-47289	1	+	26465	46988	789624	7	207,152,77,103,142,153,771,	0,1274,22426,23473,33206,41571,43623,
#Deleted in new
chr3_KI270782v1_alt	2902	28252	chr3_KI270782v1_alt:2902-28252	0	+	2902	2902	8553170	6	200,152,126,73,111,114,	0,1267,9494,22419,23458,25236,
#Deleted in new
chr3_KI270782v1_alt	2905	20216	chr3_KI270782v1_alt:2905-20216	0	+	2905	2905	8553170	3	197,126,286,	0,9491,17025,
#Deleted in new
chr3_KI270782v1_alt	2910	46715	chr3_KI270782v1_alt:2910-46715	0	+	26465	46715	789624	6	192,73,111,142,153,197,	0,22411,23450,33191,41556,43608,
#Deleted in new
chr3_KI270782v1_alt	2924	44619	chr3_KI270782v1_alt:2924-44619	0	+	12439	44619	789624	7	178,166,126,73,111,142,153,	0,451,9472,22397,23436,33177,41542,
#Deleted in new
chr3_KI270782v1_alt	2926	12764	chr3_KI270782v1_alt:2926-12764	0	+	2926	2926	8553170	2	176,368,	0,9470,
#Deleted in new
chr3_KI270782v1_alt	3012	44617	chr3_KI270782v1_alt:3012-44617	0	+	12439	44617	789624	7	90,152,126,73,111,142,151,	0,1157,9384,22309,23348,33089,41454,
#Deleted in new
chr3_KI270782v1_alt	3206	4514	chr3_KI270782v1_alt:3206-4514	0	+	3206	3206	8553170	2	335,345,	0,963,
#Deleted in new
chr3_KI270782v1_alt	12396	26471	chr3_KI270782v1_alt:12396-26471	0	+	12439	26471	789624	3	126,73,111,	0,12925,13964,
#Deleted in new
chr3_KI270782v1_alt	20398	44619	chr3_KI270782v1_alt:20398-44619	0	+	20551	44619	789624	5	179,73,111,142,153,	0,4923,5962,15703,24068,
#Deleted in new
chr3_KI270782v1_alt	24726	30573	chr3_KI270782v1_alt:24726-30573	0	+	24726	24726	8553170	3	668,111,2435,	0,1634,3412,
#Deleted in new
chr3_KI270782v1_alt	25242	46555	chr3_KI270782v1_alt:25242-46555	0	+	25242	25242	8553170	5	152,111,142,153,37,	0,1118,10859,19224,21276,
#Deleted in new
chr3_KI270782v1_alt	35622	46888	chr3_KI270782v1_alt:35622-46888	0	+	35622	35622	8553170	3	621,153,370,	0,8844,10896,
#Deleted in new
chr3_KI270782v1_alt	43021	44620	chr3_KI270782v1_alt:43021-44620	0	+	43021	43021	8553170	2	505,154,	0,1445,
#Deleted in new
chr3_KI270782v1_alt	91769	101881	chr3_KI270782v1_alt:91769-101881	3	-	91769	91769	8553170	2	488,138,	0,9974,
#Deleted in new
chr3_KI270782v1_alt	101962	115224	chr3_KI270782v1_alt:101962-115224	3	+	101962	101962	8553170	3	139,156,263,	0,541,12999,
#Deleted in new
chr3_KI270782v1_alt	103630	109958	chr3_KI270782v1_alt:103630-109958	3	+	103630	103630	8553170	3	179,165,256,	0,5346,6072,
#Deleted in new
chr3_KI270783v1_alt	69052	77513	chr3_KI270783v1_alt:69052-77513	3	+	69052	69052	789624	5	1569,123,42,93,214,	0,3192,3557,5529,8247,
#Deleted in new
chr3_KI270784v1_alt	7183	7366	chr3_KI270784v1_alt:7183-7366	7	-	7183	7183	16724991	1	183,	0,
#Deleted in new
chr3_KI270784v1_alt	9249	12063	chr3_KI270784v1_alt:9249-12063	7	+	9249	9249	16724991	2	1790,939,	0,1875,
#Deleted in new
chr3_KI270784v1_alt	38710	38814	chr3_KI270784v1_alt:38710-38814	3	-	38710	38710	8553170	1	104,	0,
#Deleted in new
chr3_KI270784v1_alt	45514	54805	chr3_KI270784v1_alt:45514-54805	7	-	45514	45514	16724991	3	209,66,110,	0,3531,9181,
#Deleted in new
chr3_KI270784v1_alt	65500	82273	chr3_KI270784v1_alt:65500-82273	0	-	65500	65500	8553170	4	275,196,547,123,	0,2188,12390,16650,
#Deleted in new
chr3_KI270784v1_alt	65707	83194	chr3_KI270784v1_alt:65707-83194	3	-	65707	65707	8553170	6	68,196,378,151,204,155,	0,1981,12183,14080,16443,17332,
#Deleted in new
chr3_KI270784v1_alt	112284	114230	chr3_KI270784v1_alt:112284-114230	7	+	112284	112284	16724991	3	540,108,154,	0,1195,1792,
#Deleted in new
chr3_KI270784v1_alt	114839	115897	chr3_KI270784v1_alt:114839-115897	7	-	114839	114839	16724991	1	1058,	0,
#Deleted in new
chr3_KI270784v1_alt	123738	125410	chr3_KI270784v1_alt:123738-125410	7	-	123738	123738	16724991	4	509,78,86,178,	0,838,1145,1494,
#Deleted in new
chr3_KI270784v1_alt	124050	125504	chr3_KI270784v1_alt:124050-125504	5	-	124050	124050	16724991	3	197,89,272,	0,833,1182,
#Deleted in new
chr3_KI270784v1_alt	124198	125492	chr3_KI270784v1_alt:124198-125492	4	-	124198	124198	16724991	2	49,260,	0,1034,
#Deleted in new
chr3_KI270784v1_alt	124677	125504	chr3_KI270784v1_alt:124677-125504	5	-	124677	124677	16724991	2	295,272,	0,555,
#Deleted in new
chr3_KI270784v1_alt	151232	173900	chr3_KI270784v1_alt:151232-173900	5	+	151232	151232	16724991	6	405,115,217,54,71,1309,	0,3432,3708,14914,16932,21359,
#Deleted in new
chr3_KI270784v1_alt	151281	174422	chr3_KI270784v1_alt:151281-174422	4	+	151281	151281	16724991	10	356,115,217,75,67,57,54,54,71,1831,	0,3383,3659,7841,10482,11355,13177,14865,16883,21310,
#Deleted in new
chr3_KI270784v1_alt	151440	178431	chr3_KI270784v1_alt:151440-178431	7	+	151440	151440	16724991	10	197,115,217,75,67,54,71,912,152,115,	0,3224,3500,7682,10323,14706,16724,21149,23939,26876,
#Deleted in new
chr3_KI270784v1_alt	160535	160642	chr3_KI270784v1_alt:160535-160642	3	+	160535	160535	8553170	1	107,	0,
#Deleted in new
chr3_KI270784v1_alt	167930	172703	chr3_KI270784v1_alt:167930-172703	4	+	167930	167930	16724991	2	305,112,	0,4661,
#Deleted in new
chr3_KI270784v1_alt	169471	174416	chr3_KI270784v1_alt:169471-174416	4	+	169471	169471	16724991	1	4945,	0,
#Deleted in new
chr3_KI270895v1_alt	3238	47678	chr3_KI270895v1_alt:3238-47678	0	+	3238	47560	789624	23	12708,153,134,165,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19681,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270895v1_alt	3238	47971	chr3_KI270895v1_alt:3238-47971	0	+	3238	47560	789624	24	12708,153,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,616,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270895v1_alt	3238	47678	chr3_KI270895v1_alt:3238-47678	0	+	3238	24401	789624	22	12708,167,134,165,156,131,89,180,126,120,209,91,168,102,234,138,154,74,65,224,163,323,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,38293,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270895v1_alt	3238	47678	chr3_KI270895v1_alt:3238-47678	0	+	3238	28016	789624	24	12708,153,134,165,156,103,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270895v1_alt	3238	47971	chr3_KI270895v1_alt:3238-47971	0	+	3238	24401	789624	24	12708,153,134,89,156,103,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,616,	0,13042,17192,19757,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270895v1_alt	3238	47678	chr3_KI270895v1_alt:3238-47678	0	+	3238	28016	789624	23	12708,153,134,89,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19757,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270895v1_alt	3238	47971	chr3_KI270895v1_alt:3238-47971	0	+	3238	41550	789624	23	12708,153,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,180,74,65,224,163,616,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270895v1_alt	3238	47678	chr3_KI270895v1_alt:3238-47678	0	+	3238	24401	789624	24	12708,167,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270895v1_alt	3238	47971	chr3_KI270895v1_alt:3238-47971	0	+	3238	24401	789624	23	12708,167,134,165,156,131,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,616,	0,13042,17192,19681,21126,22345,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270895v1_alt	3238	47678	chr3_KI270895v1_alt:3238-47678	0	+	3238	28050	789624	23	12708,153,134,89,103,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19757,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270895v1_alt	3238	47971	chr3_KI270895v1_alt:3238-47971	2	+	3238	24401	789624	23	12708,153,134,89,156,131,89,180,126,120,209,91,168,102,234,138,182,180,74,65,224,163,616,	0,13042,17192,19757,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270895v1_alt	3238	47971	chr3_KI270895v1_alt:3238-47971	0	+	3238	24401	789624	23	12708,153,134,89,156,131,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,616,	0,13042,17192,19757,21126,22345,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270895v1_alt	3238	47678	chr3_KI270895v1_alt:3238-47678	0	+	3238	28016	789624	23	12708,153,134,165,103,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19681,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270895v1_alt	3238	47971	chr3_KI270895v1_alt:3238-47971	0	+	3238	23856	789624	24	12708,167,134,165,209,156,131,89,180,126,120,209,91,168,102,234,138,182,180,74,65,224,163,616,	0,13042,17192,19681,20611,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270895v1_alt	3238	47678	chr3_KI270895v1_alt:3238-47678	0	+	3238	24401	789624	24	12708,153,134,89,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19757,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270895v1_alt	9381	11241	chr3_KI270895v1_alt:9381-11241	1	+	9381	11241	789624	2	568,1244,	0,616,
#Deleted in new
chr3_KI270895v1_alt	16219	84231	chr3_KI270895v1_alt:16219-84231	0	-	16219	16219	8553170	4	7,258,95,91,	0,61359,67348,67921,
#Deleted in new
chr3_KI270895v1_alt	16219	84226	chr3_KI270895v1_alt:16219-84226	1	-	16219	16219	8553170	5	7,177,62,95,86,	0,61440,62946,67348,67921,
#Deleted in new
chr3_KI270895v1_alt	16219	84255	chr3_KI270895v1_alt:16219-84255	0	-	16219	16219	8553170	3	7,430,115,	0,67013,67921,
#Deleted in new
chr3_KI270895v1_alt	16219	84231	chr3_KI270895v1_alt:16219-84231	0	-	16219	16219	8553170	4	7,216,95,91,	0,65159,67348,67921,
#Deleted in new
chr3_KI270895v1_alt	16280	47971	chr3_KI270895v1_alt:16280-47971	0	+	16280	47560	789624	23	153,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,616,	0,4150,6639,8084,9303,11704,13006,13333,14291,14814,15510,16201,16870,17338,19194,21127,24083,25225,26009,27184,27343,29391,31075,
#Deleted in new
chr3_KI270895v1_alt	20430	47971	chr3_KI270895v1_alt:20430-47971	0	+	20430	47560	789624	22	134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,616,	0,2489,3934,5153,7554,8856,9183,10141,10664,11360,12051,12720,13188,15044,16977,19933,21075,21859,23034,23193,25241,26925,
#Deleted in new
chr3_KI270895v1_alt	25047	28074	chr3_KI270895v1_alt:25047-28074	0	+	25047	25047	8553170	3	332,131,90,	0,536,2937,
#Deleted in new
chr3_KI270895v1_alt	40741	47563	chr3_KI270895v1_alt:40741-47563	0	+	40741	40741	8553170	6	944,74,65,224,163,208,	0,1548,2723,2882,4930,6614,
#Deleted in new
chr3_KI270895v1_alt	41632	44129	chr3_KI270895v1_alt:41632-44129	0	+	41632	41632	8553170	4	53,74,65,506,	0,657,1832,1991,
#Deleted in new
chr3_KI270895v1_alt	42215	44880	chr3_KI270895v1_alt:42215-44880	0	+	42215	42215	8553170	2	1314,1257,	0,1408,
#Deleted in new
chr3_KI270895v1_alt	53607	68330	chr3_KI270895v1_alt:53607-68330	0	-	53743	68330	789624	4	142,84,92,203,	0,1193,11353,14520,
#Deleted in new
chr3_KI270895v1_alt	54766	84226	chr3_KI270895v1_alt:54766-84226	0	-	54766	54766	8553170	3	118,95,253,	0,28801,29207,
#Deleted in new
chr3_KI270895v1_alt	59671	84123	chr3_KI270895v1_alt:59671-84123	0	-	59671	59671	8553170	3	309,95,150,	0,23896,24302,
#Deleted in new
chr3_KI270895v1_alt	59702	73317	chr3_KI270895v1_alt:59702-73317	1	-	59869	73193	789624	4	278,92,1380,200,	0,5258,8425,13415,
#Deleted in new
chr3_KI270895v1_alt	59853	90961	chr3_KI270895v1_alt:59853-90961	0	-	59853	59853	8553170	4	98,61,302,231,	0,23748,24120,30877,
#Deleted in new
chr3_KI270895v1_alt	59959	83683	chr3_KI270895v1_alt:59959-83683	0	-	59959	59959	8553170	3	21,92,116,	0,5001,23608,
#Deleted in new
chr3_KI270895v1_alt	61182	69960	chr3_KI270895v1_alt:61182-69960	1	-	61517	69478	789624	3	404,92,1833,	0,3778,6945,
#Deleted in new
chr3_KI270895v1_alt	61184	84255	chr3_KI270895v1_alt:61184-84255	0	-	61184	61184	8553170	2	402,688,	0,22383,
#Deleted in new
chr3_KI270895v1_alt	61184	73319	chr3_KI270895v1_alt:61184-73319	1	-	61517	73193	789624	4	402,92,1380,202,	0,3776,6943,11933,
#Deleted in new
chr3_KI270895v1_alt	61184	84255	chr3_KI270895v1_alt:61184-84255	0	-	61184	61184	8553170	4	402,92,95,115,	0,3776,22383,22956,
#Deleted in new
chr3_KI270895v1_alt	61186	84159	chr3_KI270895v1_alt:61186-84159	0	-	61186	61186	8553170	3	400,95,138,	0,22381,22835,
#Deleted in new
chr3_KI270895v1_alt	61229	83826	chr3_KI270895v1_alt:61229-83826	0	-	61229	61229	8553170	3	357,92,259,	0,3731,22338,
#Deleted in new
chr3_KI270895v1_alt	61357	84255	chr3_KI270895v1_alt:61357-84255	1	-	61357	61357	8553170	5	229,92,209,95,115,	0,3603,3791,22210,22783,
#Deleted in new
chr3_KI270895v1_alt	61380	84224	chr3_KI270895v1_alt:61380-84224	0	-	61380	61380	8553170	4	206,283,95,84,	0,14620,22187,22760,
#Deleted in new
chr3_KI270895v1_alt	61389	84255	chr3_KI270895v1_alt:61389-84255	0	-	61389	61389	8553170	4	197,92,95,282,	0,3571,22178,22584,
#Deleted in new
chr3_KI270895v1_alt	61423	84255	chr3_KI270895v1_alt:61423-84255	0	-	61423	61423	8553170	4	163,95,85,115,	0,22144,22472,22717,
#Deleted in new
chr3_KI270895v1_alt	61475	84255	chr3_KI270895v1_alt:61475-84255	0	-	61475	61475	8553170	5	111,92,170,95,234,	0,3485,14525,22092,22546,
#Deleted in new
chr3_KI270895v1_alt	61491	84255	chr3_KI270895v1_alt:61491-84255	0	-	61491	61491	8553170	4	95,283,95,282,	0,14509,22076,22482,
#Deleted in new
chr3_KI270895v1_alt	61539	84231	chr3_KI270895v1_alt:61539-84231	1	-	61539	61539	8553170	5	47,92,283,95,258,	0,3421,14461,22028,22434,
#Deleted in new
chr3_KI270895v1_alt	64577	68519	chr3_KI270895v1_alt:64577-68519	0	-	64577	64577	8553170	2	475,392,	0,3550,
#Deleted in new
chr3_KI270895v1_alt	65164	84255	chr3_KI270895v1_alt:65164-84255	0	-	65164	65164	8553170	3	193,95,282,	0,18403,18809,
#Deleted in new
chr3_KI270895v1_alt	68999	84255	chr3_KI270895v1_alt:68999-84255	0	-	68999	68999	8553170	3	508,95,115,	0,14568,15141,
#Deleted in new
chr3_KI270895v1_alt	69092	73226	chr3_KI270895v1_alt:69092-73226	2	-	69092	69092	8553170	2	470,109,	0,4025,
#Deleted in new
chr3_KI270895v1_alt	69131	84231	chr3_KI270895v1_alt:69131-84231	1	-	69131	69131	8553170	4	376,170,95,210,	0,6869,14436,14890,
#Deleted in new
chr3_KI270895v1_alt	69156	84255	chr3_KI270895v1_alt:69156-84255	0	-	69156	69156	8553170	3	351,95,282,	0,14411,14817,
#Deleted in new
chr3_KI270895v1_alt	69164	84247	chr3_KI270895v1_alt:69164-84247	3	-	69164	69164	8553170	4	343,153,95,107,	0,6836,14403,14976,
#Deleted in new
chr3_KI270895v1_alt	69310	84231	chr3_KI270895v1_alt:69310-84231	0	-	69310	69310	8553170	4	197,95,85,91,	0,14257,14585,14830,
#Deleted in new
chr3_KI270895v1_alt	69368	84254	chr3_KI270895v1_alt:69368-84254	0	-	69368	69368	8553170	4	139,173,95,114,	0,6632,14199,14772,
#Deleted in new
chr3_KI270895v1_alt	69369	73250	chr3_KI270895v1_alt:69369-73250	0	-	69369	69369	8553170	3	138,318,133,	0,2002,3748,
#Deleted in new
chr3_KI270895v1_alt	69386	84255	chr3_KI270895v1_alt:69386-84255	0	-	69386	69386	8553170	4	121,318,95,115,	0,1985,14181,14754,
#Deleted in new
chr3_KI270895v1_alt	69419	84255	chr3_KI270895v1_alt:69419-84255	0	-	69419	69419	8553170	4	88,318,95,282,	0,1952,14148,14554,
#Deleted in new
chr3_KI270895v1_alt	69433	84167	chr3_KI270895v1_alt:69433-84167	1	-	69433	69433	8553170	3	74,318,600,	0,1938,14134,
#Deleted in new
chr3_KI270895v1_alt	69449	90843	chr3_KI270895v1_alt:69449-90843	0	-	69449	69449	8553170	5	58,170,95,302,113,	0,6551,14118,14524,21281,
#Deleted in new
chr3_KI270895v1_alt	69802	83752	chr3_KI270895v1_alt:69802-83752	0	-	69802	69802	8553170	3	136,173,185,	0,6198,13765,
#Deleted in new
chr3_KI270895v1_alt	69885	84255	chr3_KI270895v1_alt:69885-84255	0	-	69885	69885	8553170	4	53,318,95,282,	0,1486,13682,14088,
#Deleted in new
chr3_KI270895v1_alt	71446	90761	chr3_KI270895v1_alt:71446-90761	0	-	71446	71446	8553170	4	243,95,135,31,	0,12121,12694,19284,
#Deleted in new
chr3_KI270895v1_alt	71476	84255	chr3_KI270895v1_alt:71476-84255	0	-	71476	71476	8553170	4	213,170,95,115,	0,4524,12091,12664,
#Deleted in new
chr3_KI270895v1_alt	71540	84251	chr3_KI270895v1_alt:71540-84251	1	-	71540	71540	8553170	5	149,173,95,85,111,	0,4460,12027,12355,12600,
#Deleted in new
chr3_KI270895v1_alt	72152	84231	chr3_KI270895v1_alt:72152-84231	0	-	72152	72152	8553170	3	325,95,91,	0,11415,11988,
#Deleted in new
chr3_KI270895v1_alt	75185	84231	chr3_KI270895v1_alt:75185-84231	0	-	75185	75185	8553170	2	405,664,	0,8382,
#Deleted in new
chr3_KI270895v1_alt	75305	84231	chr3_KI270895v1_alt:75305-84231	0	-	75305	75305	8553170	4	285,173,95,91,	0,695,8262,8835,
#Deleted in new
chr3_KI270895v1_alt	75517	84231	chr3_KI270895v1_alt:75517-84231	0	-	75517	75517	8553170	4	73,283,95,91,	0,483,8050,8623,
#Deleted in new
chr3_KI270895v1_alt	76000	84203	chr3_KI270895v1_alt:76000-84203	0	-	76000	76000	8553170	3	283,95,182,	0,7567,8021,
#Deleted in new
chr3_KI270895v1_alt	76077	84231	chr3_KI270895v1_alt:76077-84231	0	-	76077	76077	8553170	3	206,95,210,	0,7490,7944,
#Deleted in new
chr3_KI270895v1_alt	76187	84255	chr3_KI270895v1_alt:76187-84255	0	-	76187	76187	8553170	3	96,95,282,	0,7380,7786,
#Deleted in new
chr3_KI270895v1_alt	76416	84231	chr3_KI270895v1_alt:76416-84231	0	-	76416	76416	8553170	3	269,95,91,	0,7151,7724,
#Deleted in new
chr3_KI270895v1_alt	76418	84255	chr3_KI270895v1_alt:76418-84255	0	-	76418	76418	8553170	2	267,688,	0,7149,
#Deleted in new
chr3_KI270895v1_alt	76419	84231	chr3_KI270895v1_alt:76419-84231	0	-	76419	76419	8553170	3	207,95,91,	0,7148,7721,
#Deleted in new
chr3_KI270895v1_alt	76450	84255	chr3_KI270895v1_alt:76450-84255	0	-	76450	76450	8553170	2	176,688,	0,7117,
#Deleted in new
chr3_KI270895v1_alt	76457	84255	chr3_KI270895v1_alt:76457-84255	0	-	76457	76457	8553170	4	228,95,85,115,	0,7110,7438,7683,
#Deleted in new
chr3_KI270895v1_alt	76464	84255	chr3_KI270895v1_alt:76464-84255	0	-	76464	76464	8553170	3	221,95,282,	0,7103,7509,
#Deleted in new
chr3_KI270895v1_alt	76471	84231	chr3_KI270895v1_alt:76471-84231	0	-	76471	76471	8553170	3	214,95,210,	0,7096,7550,
#Deleted in new
chr3_KI270895v1_alt	76541	84255	chr3_KI270895v1_alt:76541-84255	0	-	76541	76541	8553170	3	144,95,360,	0,7026,7354,
#Deleted in new
chr3_KI270895v1_alt	77253	84255	chr3_KI270895v1_alt:77253-84255	0	-	77253	77253	8553170	3	583,95,115,	0,6314,6887,
#Deleted in new
chr3_KI270895v1_alt	77412	84255	chr3_KI270895v1_alt:77412-84255	1	-	77412	77412	8553170	3	54,53,688,	0,371,6155,
#Deleted in new
chr3_KI270895v1_alt	77549	84255	chr3_KI270895v1_alt:77549-84255	0	-	77549	77549	8553170	4	287,95,85,115,	0,6018,6346,6591,
#Deleted in new
chr3_KI270895v1_alt	77550	84255	chr3_KI270895v1_alt:77550-84255	0	-	77550	77550	8553170	3	286,95,234,	0,6017,6471,
#Deleted in new
chr3_KI270895v1_alt	77551	84121	chr3_KI270895v1_alt:77551-84121	0	-	77551	77551	8553170	2	285,554,	0,6016,
#Deleted in new
chr3_KI270895v1_alt	77553	84255	chr3_KI270895v1_alt:77553-84255	0	-	77553	77553	8553170	3	398,95,115,	0,6014,6587,
#Deleted in new
chr3_KI270895v1_alt	77577	84231	chr3_KI270895v1_alt:77577-84231	0	-	77577	77577	8553170	4	259,62,95,91,	0,1588,5990,6563,
#Deleted in new
chr3_KI270895v1_alt	77599	84231	chr3_KI270895v1_alt:77599-84231	0	-	77599	77599	8553170	4	237,62,95,258,	0,1566,5968,6374,
#Deleted in new
chr3_KI270895v1_alt	77634	84255	chr3_KI270895v1_alt:77634-84255	0	-	77634	77634	8553170	3	202,95,282,	0,5933,6339,
#Deleted in new
chr3_KI270895v1_alt	81036	84255	chr3_KI270895v1_alt:81036-84255	0	-	81036	81036	8553170	2	26,688,	0,2531,
#Deleted in new
chr3_KI270895v1_alt	81284	92079	chr3_KI270895v1_alt:81284-92079	1	-	81284	81284	8553170	3	310,704,1349,	0,2283,9446,
#Deleted in new
chr3_KI270895v1_alt	81284	84262	chr3_KI270895v1_alt:81284-84262	0	-	81284	81284	8553170	3	310,95,289,	0,2283,2689,
#Deleted in new
chr3_KI270895v1_alt	81284	84231	chr3_KI270895v1_alt:81284-84231	0	-	81284	81284	8553170	3	287,85,91,	0,2611,2856,
#Deleted in new
chr3_KI270895v1_alt	81284	103025	chr3_KI270895v1_alt:81284-103025	0	-	81284	81284	8553170	4	310,95,135,64,	0,2283,2856,21677,
#Deleted in new
chr3_KI270895v1_alt	81366	84231	chr3_KI270895v1_alt:81366-84231	1	-	81366	81366	8553170	3	228,413,91,	0,2201,2774,
#Deleted in new
chr3_KI270895v1_alt	81387	84255	chr3_KI270895v1_alt:81387-84255	0	-	81387	81387	8553170	4	207,95,127,115,	0,2180,2466,2753,
#Deleted in new
chr3_KI270895v1_alt	81390	84255	chr3_KI270895v1_alt:81390-84255	0	-	81390	81390	8553170	3	204,95,360,	0,2177,2505,
#Deleted in new
chr3_KI270895v1_alt	81420	84255	chr3_KI270895v1_alt:81420-84255	0	-	81420	81420	8553170	3	174,95,234,	0,2147,2601,
#Deleted in new
chr3_KI270895v1_alt	81470	104016	chr3_KI270895v1_alt:81470-104016	0	-	81470	81470	789624	5	124,95,135,100,414,	0,2097,2670,21491,22132,
#Deleted in new
chr3_KI270895v1_alt	81478	93252	chr3_KI270895v1_alt:81478-93252	0	-	81478	81478	8553170	4	116,95,254,60,	0,2089,2543,11714,
#Deleted in new
chr3_KI270895v1_alt	81489	103753	chr3_KI270895v1_alt:81489-103753	0	-	81489	81489	8553170	4	105,95,135,151,	0,2078,2651,22113,
#Deleted in new
chr3_KI270895v1_alt	82821	84255	chr3_KI270895v1_alt:82821-84255	1	-	82821	82821	8553170	2	841,282,	0,1152,
#Deleted in new
chr3_KI270895v1_alt	82845	84255	chr3_KI270895v1_alt:82845-84255	0	-	82845	82845	8553170	2	817,115,	0,1295,
#Deleted in new
chr3_KI270895v1_alt	83022	84255	chr3_KI270895v1_alt:83022-84255	0	-	83022	83022	8553170	2	640,234,	0,999,
#Deleted in new
chr3_KI270895v1_alt	83136	84231	chr3_KI270895v1_alt:83136-84231	0	-	83136	83136	8553170	3	289,95,258,	0,431,837,
#Deleted in new
chr3_KI270895v1_alt	83189	84255	chr3_KI270895v1_alt:83189-84255	0	-	83189	83189	8553170	3	473,85,115,	0,706,951,
#Deleted in new
chr3_KI270895v1_alt	83572	106479	chr3_KI270895v1_alt:83572-106479	1	-	83572	83572	8553170	5	90,265,118,92,19,	0,20030,20508,22438,22888,
#Deleted in new
chr3_KI270895v1_alt	83599	95898	chr3_KI270895v1_alt:83599-95898	0	-	83599	83599	8553170	6	63,85,135,290,178,88,	0,296,541,7131,9593,12211,
#Deleted in new
chr3_KI270895v1_alt	83601	93737	chr3_KI270895v1_alt:83601-93737	0	-	83601	83601	8553170	2	61,545,	0,9591,
#Deleted in new
chr3_KI270895v1_alt	83601	103730	chr3_KI270895v1_alt:83601-103730	0	-	83601	83601	8553170	4	61,302,178,128,	0,372,9591,20001,
#Deleted in new
chr3_KI270895v1_alt	83601	85711	chr3_KI270895v1_alt:83601-85711	0	-	83601	83601	8553170	3	61,302,430,	0,372,1680,
#Deleted in new
chr3_KI270895v1_alt	83601	103049	chr3_KI270895v1_alt:83601-103049	0	-	83601	83601	8553170	6	61,302,53,178,229,88,	0,372,7366,9591,12209,19360,
#Deleted in new
chr3_KI270895v1_alt	83601	86268	chr3_KI270895v1_alt:83601-86268	0	-	83601	83601	8553170	2	674,174,	0,2493,
#Deleted in new
chr3_KI270895v1_alt	83601	103642	chr3_KI270895v1_alt:83601-103642	1	-	83601	83601	8553170	6	61,254,82,116,178,40,	0,420,7129,7303,9591,20001,
#Deleted in new
chr3_KI270895v1_alt	83601	103022	chr3_KI270895v1_alt:83601-103022	0	-	83601	83601	8553170	5	61,85,135,63,61,	0,294,539,19190,19360,
#Deleted in new
chr3_KI270895v1_alt	83601	103879	chr3_KI270895v1_alt:83601-103879	0	-	83601	83601	8553170	5	61,302,178,100,277,	0,372,9591,19360,20001,
#Deleted in new
chr3_KI270895v1_alt	83601	99050	chr3_KI270895v1_alt:83601-99050	0	-	83601	83601	8553170	3	61,135,146,	0,539,15303,
#Deleted in new
chr3_KI270895v1_alt	83601	103002	chr3_KI270895v1_alt:83601-103002	1	-	83601	83601	8553170	4	674,121,178,41,	0,1680,9591,19360,
#Deleted in new
chr3_KI270895v1_alt	83601	103718	chr3_KI270895v1_alt:83601-103718	0	-	83601	83601	8553170	5	674,116,178,100,116,	0,7303,9591,19360,20001,
#Deleted in new
chr3_KI270895v1_alt	83601	111121	chr3_KI270895v1_alt:83601-111121	1	-	83601	83601	8553170	8	61,135,290,178,229,114,131,23,	0,539,7129,9591,12209,24933,27132,27497,
#Deleted in new
chr3_KI270895v1_alt	83601	103852	chr3_KI270895v1_alt:83601-103852	0	-	83601	83601	8553170	5	61,135,290,110,250,	0,539,7129,9591,20001,
#Deleted in new
chr3_KI270895v1_alt	83601	106579	chr3_KI270895v1_alt:83601-106579	0	-	83601	83601	8553170	6	61,135,63,100,265,127,	0,539,19190,19360,20001,22851,
#Deleted in new
chr3_KI270895v1_alt	83601	103620	chr3_KI270895v1_alt:83601-103620	0	-	83601	83601	8553170	6	61,116,178,229,100,18,	0,7303,9591,12209,19360,20001,
#Deleted in new
chr3_KI270895v1_alt	83602	110784	chr3_KI270895v1_alt:83602-110784	0	-	83602	83602	8553170	4	60,265,114,51,	0,20000,24932,27131,
#Deleted in new
chr3_KI270895v1_alt	83602	103644	chr3_KI270895v1_alt:83602-103644	1	-	83602	83602	8553170	6	60,302,149,229,100,42,	0,371,9619,12208,19359,20000,
#Deleted in new
chr3_KI270895v1_alt	83604	86745	chr3_KI270895v1_alt:83604-86745	0	-	83604	83604	8553170	2	671,75,	0,3066,
#Deleted in new
chr3_KI270895v1_alt	83607	108627	chr3_KI270895v1_alt:83607-108627	0	-	83607	83607	8553170	6	55,135,178,229,265,93,	0,533,9585,12203,19995,24927,
#Deleted in new
chr3_KI270895v1_alt	83607	106085	chr3_KI270895v1_alt:83607-106085	1	-	83607	83607	8553170	8	55,302,53,178,100,265,128,75,	0,366,7360,9585,19354,19995,20473,22403,
#Deleted in new
chr3_KI270895v1_alt	83631	103749	chr3_KI270895v1_alt:83631-103749	1	-	83631	83631	8553170	4	644,63,100,147,	0,19160,19330,19971,
#Deleted in new
chr3_KI270895v1_alt	83634	93317	chr3_KI270895v1_alt:83634-93317	0	-	83634	83634	8553170	4	28,302,290,125,	0,339,7096,9558,
#Deleted in new
chr3_KI270895v1_alt	83648	91277	chr3_KI270895v1_alt:83648-91277	0	-	83648	83648	8553170	3	14,302,547,	0,325,7082,
#Deleted in new
chr3_KI270895v1_alt	83706	102986	chr3_KI270895v1_alt:83706-102986	0	-	83706	83706	8553170	3	569,178,25,	0,9486,19255,
#Deleted in new
chr3_KI270895v1_alt	83904	108650	chr3_KI270895v1_alt:83904-108650	0	-	83904	83904	8553170	4	371,265,122,116,	0,19698,22556,24630,
#Deleted in new
chr3_KI270895v1_alt	83904	95963	chr3_KI270895v1_alt:83904-95963	0	-	83904	83904	8553170	3	371,178,153,	0,9288,11906,
#Deleted in new
chr3_KI270895v1_alt	83904	108646	chr3_KI270895v1_alt:83904-108646	0	-	83904	83904	8553170	4	371,121,265,112,	0,1377,19698,24630,
#Deleted in new
chr3_KI270895v1_alt	83940	103818	chr3_KI270895v1_alt:83940-103818	0	-	83940	83940	8553170	3	335,178,216,	0,9252,19662,
#Deleted in new
chr3_KI270895v1_alt	84038	93361	chr3_KI270895v1_alt:84038-93361	1	-	84038	84038	8553170	4	237,260,290,169,	0,5925,6692,9154,
#Deleted in new
chr3_KI270895v1_alt	84063	108567	chr3_KI270895v1_alt:84063-108567	0	-	84063	84063	8553170	3	212,265,33,	0,19539,24471,
#Deleted in new
chr3_KI270895v1_alt	84083	110784	chr3_KI270895v1_alt:84083-110784	1	-	84083	84083	8553170	7	192,100,265,118,122,114,51,	0,18878,19519,19997,22377,24451,26650,
#Deleted in new
chr3_KI270895v1_alt	84140	108650	chr3_KI270895v1_alt:84140-108650	0	-	84140	84140	8553170	5	135,100,265,115,116,	0,18821,19462,21541,24394,
#Deleted in new
chr3_KI270895v1_alt	84178	110784	chr3_KI270895v1_alt:84178-110784	0	-	84178	84178	8553170	6	97,100,265,122,114,51,	0,18783,19424,22282,24356,26555,
#Deleted in new
chr3_KI270895v1_alt	90778	93754	chr3_KI270895v1_alt:90778-93754	0	-	90778	90778	8553170	2	242,562,	0,2414,
#Deleted in new
chr3_KI270895v1_alt	90815	104579	chr3_KI270895v1_alt:90815-104579	1	-	90815	90815	8553170	6	205,178,229,100,265,499,	0,2377,4995,12146,12787,13265,
#Deleted in new
chr3_KI270895v1_alt	90885	105983	chr3_KI270895v1_alt:90885-105983	0	-	90885	90885	8553170	4	135,178,265,202,	0,2307,12717,14896,
#Deleted in new
chr3_KI270895v1_alt	90992	106097	chr3_KI270895v1_alt:90992-106097	1	-	90992	90992	8553170	6	28,178,229,265,112,45,	0,2200,4818,12610,14689,15060,
#Deleted in new
chr3_KI270895v1_alt	93085	103063	chr3_KI270895v1_alt:93085-103063	0	-	93085	93085	8553170	3	285,229,102,	0,2725,9876,
#Deleted in new
chr3_KI270895v1_alt	93229	104579	chr3_KI270895v1_alt:93229-104579	0	-	93229	93229	8553170	4	141,100,265,499,	0,9732,10373,10851,
#Deleted in new
chr3_KI270895v1_alt	93283	103974	chr3_KI270895v1_alt:93283-103974	0	-	93283	93283	8553170	5	87,229,63,100,372,	0,2527,9508,9678,10319,
#Deleted in new
chr3_KI270895v1_alt	95845	102975	chr3_KI270895v1_alt:95845-102975	0	-	95845	95845	8553170	2	194,184,	0,6946,
#Deleted in new
chr3_KI270895v1_alt	95858	104033	chr3_KI270895v1_alt:95858-104033	0	-	95858	95858	8553170	3	181,100,431,	0,7103,7744,
#Deleted in new
chr3_KI270895v1_alt	95875	110797	chr3_KI270895v1_alt:95875-110797	0	-	95875	95875	8553170	5	164,265,122,114,64,	0,7727,10585,12659,14858,
#Deleted in new
chr3_KI270895v1_alt	95920	104289	chr3_KI270895v1_alt:95920-104289	0	-	95920	95920	8553170	2	119,687,	0,7682,
#Deleted in new
chr3_KI270895v1_alt	95974	114616	chr3_KI270895v1_alt:95974-114616	0	-	95974	95974	8553170	7	65,100,265,114,131,112,65,	0,6987,7628,12560,14759,15124,18577,
#Deleted in new
chr3_KI270895v1_alt	102961	111508	chr3_KI270895v1_alt:102961-111508	0	-	102961	102961	8553170	6	100,265,114,131,112,70,	0,641,5573,7772,8137,8477,
#Deleted in new
chr3_KI270895v1_alt	103537	134335	chr3_KI270895v1_alt:103537-134335	0	-	103537	103537	789624	14	330,114,131,112,122,170,196,169,123,149,165,163,86,101,	0,4997,7196,7561,11014,14875,16183,17562,20221,22648,24612,26129,27021,30697,
#Deleted in new
chr3_KI270895v1_alt	103629	106188	chr3_KI270895v1_alt:103629-106188	1	-	103629	103629	8553170	4	238,122,187,136,	0,451,2152,2423,
#Deleted in new
chr3_KI270895v1_alt	103846	110531	chr3_KI270895v1_alt:103846-110531	0	-	103846	103846	8553170	3	21,114,349,	0,4688,6336,
#Deleted in new
chr3_KI270895v1_alt	105681	108623	chr3_KI270895v1_alt:105681-108623	0	-	105681	105681	8553170	4	112,92,122,89,	0,329,779,2853,
#Deleted in new
chr3_KI270895v1_alt	106028	110412	chr3_KI270895v1_alt:106028-110412	0	-	106028	106028	8553170	3	554,114,230,	0,2506,4154,
#Deleted in new
chr3_KI270895v1_alt	106052	110834	chr3_KI270895v1_alt:106052-110834	0	-	106052	106052	8553170	3	530,114,101,	0,2482,4681,
#Deleted in new
chr3_KI270895v1_alt	106059	108940	chr3_KI270895v1_alt:106059-108940	0	-	106059	106059	8553170	2	523,406,	0,2475,
#Deleted in new
chr3_KI270895v1_alt	106139	110029	chr3_KI270895v1_alt:106139-110029	0	-	106139	106139	8553170	3	443,114,51,	0,2395,3839,
#Deleted in new
chr3_KI270895v1_alt	106259	134323	chr3_KI270895v1_alt:106259-134323	1	-	106259	106259	8553170	14	2389,131,112,122,170,196,169,123,149,165,144,163,86,89,	0,4474,4839,8292,12153,13461,14840,17499,19926,21890,22373,23407,24299,27975,
#Deleted in new
chr3_KI270895v1_alt	106495	134304	chr3_KI270895v1_alt:106495-134304	7	-	106495	106495	16724991	15	87,114,131,112,122,170,196,169,123,149,165,144,163,86,70,	0,2039,4238,4603,8056,11917,13225,14604,17263,19690,21654,22137,23171,24063,27739,
#Deleted in new
chr3_KI270895v1_alt	110306	114645	chr3_KI270895v1_alt:110306-114645	0	-	110306	110306	8553170	3	558,112,94,	0,792,4245,
#Deleted in new
chr3_KI270895v1_alt	114332	119793	chr3_KI270895v1_alt:114332-119793	0	-	114332	114332	8553170	3	341,170,73,	0,4080,5388,
#Deleted in new
chr3_KI270895v1_alt	120608	134327	chr3_KI270895v1_alt:120608-134327	1	-	120608	120608	8553170	7	660,123,149,165,163,86,93,	0,3150,5577,7541,9058,9950,13626,
#Deleted in new
chr3_KI270895v1_alt	125717	134338	chr3_KI270895v1_alt:125717-134338	1	-	125717	125717	8553170	6	617,165,144,163,86,104,	0,2432,2915,3949,4841,8517,
#Deleted in new
chr3_KI270895v1_alt	128111	134307	chr3_KI270895v1_alt:128111-134307	0	-	128111	128111	8553170	4	203,163,86,73,	0,1555,2447,6123,
#Deleted in new
chr3_KI270895v1_alt	128290	134335	chr3_KI270895v1_alt:128290-134335	1	-	128290	128290	8553170	5	24,209,163,86,101,	0,277,1376,2268,5944,
#Deleted in new
chr3_KI270895v1_alt	134472	136835	chr3_KI270895v1_alt:134472-136835	3	+	134472	134472	8553170	3	623,90,971,	0,1197,1392,
#Deleted in new
chr3_KI270895v1_alt	140927	142254	chr3_KI270895v1_alt:140927-142254	7	+	140927	140927	16724991	2	748,322,	0,1005,
#Deleted in new
chr3_KI270924v1_alt	3234	48864	chr3_KI270924v1_alt:3234-48864	3	+	3234	48861	789624	25	2884,84,153,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,208,	0,12631,13049,17082,19511,21500,22719,25146,26448,26775,27702,28218,28914,29825,30494,30962,33554,35497,38435,39577,40361,41536,41695,43738,45422,
#Deleted in new
chr3_KI270924v1_alt	3238	49270	chr3_KI270924v1_alt:3238-49270	0	+	3238	42856	789624	23	12711,153,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,180,74,65,224,163,614,	0,13045,17078,19507,21496,22715,25142,26444,26771,27698,28214,28910,29821,30490,30958,33550,35493,39573,40357,41532,41691,43734,45418,
#Deleted in new
chr3_KI270924v1_alt	3238	49270	chr3_KI270924v1_alt:3238-49270	0	+	3238	48861	789624	24	12711,153,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,614,	0,13045,17078,19507,21496,22715,25142,26444,26771,27698,28214,28910,29821,30490,30958,33550,35493,38431,39573,40357,41532,41691,43734,45418,
#Deleted in new
chr3_KI270924v1_alt	3238	48979	chr3_KI270924v1_alt:3238-48979	0	+	3238	28412	789624	24	12711,153,134,165,156,103,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13045,17078,19507,21496,22715,25142,26444,26771,27698,28214,28910,29821,30490,30958,33550,35493,38431,39573,40357,41532,41691,43734,45418,
#Deleted in new
chr3_KI270924v1_alt	3238	48979	chr3_KI270924v1_alt:3238-48979	0	+	3238	48861	789624	23	12711,153,134,165,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13045,17078,19507,22715,25142,26444,26771,27698,28214,28910,29821,30490,30958,33550,35493,38431,39573,40357,41532,41691,43734,45418,
#Deleted in new
chr3_KI270924v1_alt	3238	48979	chr3_KI270924v1_alt:3238-48979	0	+	3238	24771	789624	24	12711,153,134,89,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13045,17078,19583,21496,22715,25142,26444,26771,27698,28214,28910,29821,30490,30958,33550,35493,38431,39573,40357,41532,41691,43734,45418,
#Deleted in new
chr3_KI270924v1_alt	3238	48979	chr3_KI270924v1_alt:3238-48979	0	+	3238	24771	789624	22	12711,167,134,165,156,131,89,180,126,120,209,91,168,102,234,138,154,74,65,224,163,323,	0,13045,17078,19507,21496,22715,25142,26444,26771,27698,28214,28910,29821,30490,30958,33550,39599,40357,41532,41691,43734,45418,
#Deleted in new
chr3_KI270924v1_alt	3238	48979	chr3_KI270924v1_alt:3238-48979	0	+	3238	28412	789624	23	12711,153,134,89,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13045,17078,19583,22715,25142,26444,26771,27698,28214,28910,29821,30490,30958,33550,35493,38431,39573,40357,41532,41691,43734,45418,
#Deleted in new
chr3_KI270924v1_alt	3238	48979	chr3_KI270924v1_alt:3238-48979	0	+	3238	28446	789624	23	12711,153,134,89,103,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13045,17078,19583,22715,25142,26444,26771,27698,28214,28910,29821,30490,30958,33550,35493,38431,39573,40357,41532,41691,43734,45418,
#Deleted in new
chr3_KI270924v1_alt	3238	48979	chr3_KI270924v1_alt:3238-48979	0	+	3238	28412	789624	23	12711,153,134,165,103,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13045,17078,19507,22715,25142,26444,26771,27698,28214,28910,29821,30490,30958,33550,35493,38431,39573,40357,41532,41691,43734,45418,
#Deleted in new
chr3_KI270924v1_alt	3238	48979	chr3_KI270924v1_alt:3238-48979	0	+	3238	24771	789624	24	12711,167,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13045,17078,19507,21496,22715,25142,26444,26771,27698,28214,28910,29821,30490,30958,33550,35493,38431,39573,40357,41532,41691,43734,45418,
#Deleted in new
chr3_KI270924v1_alt	7302	9177	chr3_KI270924v1_alt:7302-9177	1	+	7302	9177	789624	2	919,908,	0,967,
#Deleted in new
chr3_KI270924v1_alt	16283	49270	chr3_KI270924v1_alt:16283-49270	0	+	16283	24771	789624	22	167,134,165,156,131,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,614,	0,4033,6462,8451,9670,13399,13726,14653,15169,15865,16776,17445,17913,20505,22448,25386,26528,27312,28487,28646,30689,32373,
#Deleted in new
chr3_KI270924v1_alt	16283	49270	chr3_KI270924v1_alt:16283-49270	0	+	16283	24771	789624	22	153,134,89,156,131,89,180,126,120,209,91,168,102,234,138,182,180,74,65,224,163,614,	0,4033,6538,8451,9670,12097,13399,13726,14653,15169,15865,16776,17445,17913,20505,22448,26528,27312,28487,28646,30689,32373,
#Deleted in new
chr3_KI270924v1_alt	16283	49270	chr3_KI270924v1_alt:16283-49270	0	+	16283	48861	789624	23	153,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,614,	0,4033,6462,8451,9670,12097,13399,13726,14653,15169,15865,16776,17445,17913,20505,22448,25386,26528,27312,28487,28646,30689,32373,
#Deleted in new
chr3_KI270924v1_alt	16283	49270	chr3_KI270924v1_alt:16283-49270	0	+	16283	24226	789624	23	167,134,165,209,156,131,89,180,126,120,209,91,168,102,234,138,182,180,74,65,224,163,614,	0,4033,6462,7936,8451,9670,12097,13399,13726,14653,15169,15865,16776,17445,17913,20505,22448,26528,27312,28487,28646,30689,32373,
#Deleted in new
chr3_KI270924v1_alt	16283	49270	chr3_KI270924v1_alt:16283-49270	0	+	16283	24771	789624	22	153,134,89,156,131,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,614,	0,4033,6538,8451,9670,13399,13726,14653,15169,15865,16776,17445,17913,20505,22448,25386,26528,27312,28487,28646,30689,32373,
#Deleted in new
chr3_KI270924v1_alt	16283	49270	chr3_KI270924v1_alt:16283-49270	0	+	16283	24771	789624	23	153,134,89,156,103,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,614,	0,4033,6538,8451,9670,12097,13399,13726,14653,15169,15865,16776,17445,17913,20505,22448,25386,26528,27312,28487,28646,30689,32373,
#Deleted in new
chr3_KI270924v1_alt	20316	49270	chr3_KI270924v1_alt:20316-49270	0	+	20316	48861	789624	22	134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,614,	0,2429,4418,5637,8064,9366,9693,10620,11136,11832,12743,13412,13880,16472,18415,21353,22495,23279,24454,24613,26656,28340,
#Deleted in new
chr3_KI270924v1_alt	25417	28470	chr3_KI270924v1_alt:25417-28470	0	+	25417	25417	8553170	3	332,131,90,	0,536,2963,
#Deleted in new
chr3_KI270924v1_alt	42047	48864	chr3_KI270924v1_alt:42047-48864	0	+	42047	42047	8553170	6	944,74,65,224,163,208,	0,1548,2723,2882,4925,6609,
#Deleted in new
chr3_KI270924v1_alt	42938	45435	chr3_KI270924v1_alt:42938-45435	0	+	42938	42938	8553170	4	53,74,65,506,	0,657,1832,1991,
#Deleted in new
chr3_KI270924v1_alt	43521	46181	chr3_KI270924v1_alt:43521-46181	0	+	43521	43521	8553170	2	1314,1252,	0,1408,
#Deleted in new
chr3_KI270924v1_alt	54920	69674	chr3_KI270924v1_alt:54920-69674	0	-	55056	69674	789624	4	142,84,92,203,	0,1193,11384,14551,
#Deleted in new
chr3_KI270924v1_alt	56079	87861	chr3_KI270924v1_alt:56079-87861	0	-	56079	56079	8553170	3	118,95,253,	0,31123,31529,
#Deleted in new
chr3_KI270924v1_alt	60979	87758	chr3_KI270924v1_alt:60979-87758	0	-	60979	60979	8553170	3	309,95,150,	0,26223,26629,
#Deleted in new
chr3_KI270924v1_alt	61010	75160	chr3_KI270924v1_alt:61010-75160	3	-	61177	75036	789624	4	278,92,1893,200,	0,5294,8461,13950,
#Deleted in new
chr3_KI270924v1_alt	61267	87318	chr3_KI270924v1_alt:61267-87318	2	-	61267	61267	8553170	3	21,92,116,	0,5037,25935,
#Deleted in new
chr3_KI270924v1_alt	62490	71817	chr3_KI270924v1_alt:62490-71817	1	-	62825	71335	789624	3	404,92,2346,	0,3814,6981,
#Deleted in new
chr3_KI270924v1_alt	62492	75162	chr3_KI270924v1_alt:62492-75162	1	-	62825	75036	789624	4	402,92,1893,202,	0,3812,6979,12468,
#Deleted in new
chr3_KI270924v1_alt	62492	87890	chr3_KI270924v1_alt:62492-87890	0	-	62492	62492	8553170	2	402,688,	0,24710,
#Deleted in new
chr3_KI270924v1_alt	62492	87890	chr3_KI270924v1_alt:62492-87890	0	-	62492	62492	8553170	4	402,92,95,115,	0,3812,24710,25283,
#Deleted in new
chr3_KI270924v1_alt	62493	71817	chr3_KI270924v1_alt:62493-71817	1	-	62825	71335	789624	4	401,92,900,933,	0,3811,6978,8391,
#Deleted in new
chr3_KI270924v1_alt	62494	87794	chr3_KI270924v1_alt:62494-87794	0	-	62494	62494	8553170	3	400,95,138,	0,24708,25162,
#Deleted in new
chr3_KI270924v1_alt	62537	87461	chr3_KI270924v1_alt:62537-87461	0	-	62537	62537	8553170	3	357,92,259,	0,3767,24665,
#Deleted in new
chr3_KI270924v1_alt	62665	87890	chr3_KI270924v1_alt:62665-87890	1	-	62665	62665	8553170	5	229,92,209,95,115,	0,3639,3827,24537,25110,
#Deleted in new
chr3_KI270924v1_alt	62688	87859	chr3_KI270924v1_alt:62688-87859	0	-	62688	62688	8553170	4	206,283,95,84,	0,15159,24514,25087,
#Deleted in new
chr3_KI270924v1_alt	62697	87890	chr3_KI270924v1_alt:62697-87890	0	-	62697	62697	8553170	4	197,92,95,282,	0,3607,24505,24911,
#Deleted in new
chr3_KI270924v1_alt	62731	87890	chr3_KI270924v1_alt:62731-87890	0	-	62731	62731	8553170	4	163,95,85,115,	0,24471,24799,25044,
#Deleted in new
chr3_KI270924v1_alt	62783	87890	chr3_KI270924v1_alt:62783-87890	0	-	62783	62783	8553170	5	111,92,170,95,234,	0,3521,15064,24419,24873,
#Deleted in new
chr3_KI270924v1_alt	62799	87890	chr3_KI270924v1_alt:62799-87890	0	-	62799	62799	8553170	4	95,283,95,282,	0,15048,24403,24809,
#Deleted in new
chr3_KI270924v1_alt	62847	87866	chr3_KI270924v1_alt:62847-87866	1	-	62847	62847	8553170	5	47,92,283,95,258,	0,3457,15000,24355,24761,
#Deleted in new
chr3_KI270924v1_alt	65921	69863	chr3_KI270924v1_alt:65921-69863	0	-	65921	65921	8553170	2	475,392,	0,3550,
#Deleted in new
chr3_KI270924v1_alt	66508	87890	chr3_KI270924v1_alt:66508-87890	0	-	66508	66508	8553170	3	193,95,282,	0,20694,21100,
#Deleted in new
chr3_KI270924v1_alt	70856	87890	chr3_KI270924v1_alt:70856-87890	0	-	70856	70856	8553170	3	508,95,115,	0,16346,16919,
#Deleted in new
chr3_KI270924v1_alt	70949	75069	chr3_KI270924v1_alt:70949-75069	0	-	70949	70949	8553170	2	470,109,	0,4011,
#Deleted in new
chr3_KI270924v1_alt	70962	87564	chr3_KI270924v1_alt:70962-87564	0	-	70962	70962	8553170	2	402,362,	0,16240,
#Deleted in new
chr3_KI270924v1_alt	70988	87866	chr3_KI270924v1_alt:70988-87866	1	-	70988	70988	8553170	4	376,170,95,210,	0,6859,16214,16668,
#Deleted in new
chr3_KI270924v1_alt	71013	87890	chr3_KI270924v1_alt:71013-87890	0	-	71013	71013	8553170	3	351,95,282,	0,16189,16595,
#Deleted in new
chr3_KI270924v1_alt	71021	87882	chr3_KI270924v1_alt:71021-87882	1	-	71021	71021	8553170	4	343,153,95,107,	0,6826,16181,16754,
#Deleted in new
chr3_KI270924v1_alt	71167	87866	chr3_KI270924v1_alt:71167-87866	0	-	71167	71167	8553170	4	197,95,85,91,	0,16035,16363,16608,
#Deleted in new
chr3_KI270924v1_alt	71225	87889	chr3_KI270924v1_alt:71225-87889	0	-	71225	71225	8553170	4	139,173,95,114,	0,6622,15977,16550,
#Deleted in new
chr3_KI270924v1_alt	71226	75093	chr3_KI270924v1_alt:71226-75093	0	-	71226	71226	8553170	3	138,318,133,	0,1999,3734,
#Deleted in new
chr3_KI270924v1_alt	71243	87890	chr3_KI270924v1_alt:71243-87890	0	-	71243	71243	8553170	4	121,318,95,115,	0,1982,15959,16532,
#Deleted in new
chr3_KI270924v1_alt	71276	87890	chr3_KI270924v1_alt:71276-87890	0	-	71276	71276	8553170	4	88,318,95,282,	0,1949,15926,16332,
#Deleted in new
chr3_KI270924v1_alt	71290	87802	chr3_KI270924v1_alt:71290-87802	1	-	71290	71290	8553170	3	74,318,600,	0,1935,15912,
#Deleted in new
chr3_KI270924v1_alt	71306	94487	chr3_KI270924v1_alt:71306-94487	0	-	71306	71306	8553170	5	58,170,95,302,113,	0,6541,15896,16302,23068,
#Deleted in new
chr3_KI270924v1_alt	71659	87387	chr3_KI270924v1_alt:71659-87387	0	-	71659	71659	8553170	3	138,173,185,	0,6188,15543,
#Deleted in new
chr3_KI270924v1_alt	71742	87890	chr3_KI270924v1_alt:71742-87890	0	-	71742	71742	8553170	4	55,318,95,282,	0,1483,15460,15866,
#Deleted in new
chr3_KI270924v1_alt	73301	94405	chr3_KI270924v1_alt:73301-94405	0	-	73301	73301	8553170	4	242,95,135,31,	0,13901,14474,21073,
#Deleted in new
chr3_KI270924v1_alt	73331	87890	chr3_KI270924v1_alt:73331-87890	0	-	73331	73331	8553170	4	212,170,95,115,	0,4516,13871,14444,
#Deleted in new
chr3_KI270924v1_alt	73395	87886	chr3_KI270924v1_alt:73395-87886	1	-	73395	73395	8553170	5	148,173,95,85,111,	0,4452,13807,14135,14380,
#Deleted in new
chr3_KI270924v1_alt	74004	87866	chr3_KI270924v1_alt:74004-87866	0	-	74004	74004	8553170	3	325,95,91,	0,13198,13771,
#Deleted in new
chr3_KI270924v1_alt	77033	87866	chr3_KI270924v1_alt:77033-87866	0	-	77033	77033	8553170	2	408,664,	0,10169,
#Deleted in new
chr3_KI270924v1_alt	77156	87866	chr3_KI270924v1_alt:77156-87866	0	-	77156	77156	8553170	4	285,173,95,91,	0,691,10046,10619,
#Deleted in new
chr3_KI270924v1_alt	77368	87866	chr3_KI270924v1_alt:77368-87866	0	-	77368	77368	8553170	4	73,283,95,91,	0,479,9834,10407,
#Deleted in new
chr3_KI270924v1_alt	77847	87838	chr3_KI270924v1_alt:77847-87838	0	-	77847	77847	8553170	3	283,95,182,	0,9355,9809,
#Deleted in new
chr3_KI270924v1_alt	77924	87866	chr3_KI270924v1_alt:77924-87866	0	-	77924	77924	8553170	3	206,95,210,	0,9278,9732,
#Deleted in new
chr3_KI270924v1_alt	78034	87890	chr3_KI270924v1_alt:78034-87890	0	-	78034	78034	8553170	3	96,95,282,	0,9168,9574,
#Deleted in new
chr3_KI270924v1_alt	78263	87866	chr3_KI270924v1_alt:78263-87866	0	-	78263	78263	8553170	3	269,95,91,	0,8939,9512,
#Deleted in new
chr3_KI270924v1_alt	78265	87890	chr3_KI270924v1_alt:78265-87890	0	-	78265	78265	8553170	2	267,688,	0,8937,
#Deleted in new
chr3_KI270924v1_alt	78266	87866	chr3_KI270924v1_alt:78266-87866	0	-	78266	78266	8553170	3	207,95,91,	0,8936,9509,
#Deleted in new
chr3_KI270924v1_alt	78297	87890	chr3_KI270924v1_alt:78297-87890	0	-	78297	78297	8553170	2	176,688,	0,8905,
#Deleted in new
chr3_KI270924v1_alt	78304	87890	chr3_KI270924v1_alt:78304-87890	0	-	78304	78304	8553170	4	228,95,85,115,	0,8898,9226,9471,
#Deleted in new
chr3_KI270924v1_alt	78311	87890	chr3_KI270924v1_alt:78311-87890	0	-	78311	78311	8553170	3	221,95,282,	0,8891,9297,
#Deleted in new
chr3_KI270924v1_alt	78318	87866	chr3_KI270924v1_alt:78318-87866	0	-	78318	78318	8553170	3	214,95,210,	0,8884,9338,
#Deleted in new
chr3_KI270924v1_alt	78388	87890	chr3_KI270924v1_alt:78388-87890	0	-	78388	78388	8553170	3	144,95,360,	0,8814,9142,
#Deleted in new
chr3_KI270924v1_alt	79073	87890	chr3_KI270924v1_alt:79073-87890	0	-	79073	79073	8553170	3	583,95,115,	0,8129,8702,
#Deleted in new
chr3_KI270924v1_alt	79232	87890	chr3_KI270924v1_alt:79232-87890	1	-	79232	79232	8553170	3	54,53,688,	0,371,7970,
#Deleted in new
chr3_KI270924v1_alt	79369	87890	chr3_KI270924v1_alt:79369-87890	0	-	79369	79369	8553170	4	287,95,85,115,	0,7833,8161,8406,
#Deleted in new
chr3_KI270924v1_alt	79370	87890	chr3_KI270924v1_alt:79370-87890	0	-	79370	79370	8553170	3	286,95,234,	0,7832,8286,
#Deleted in new
chr3_KI270924v1_alt	79371	87756	chr3_KI270924v1_alt:79371-87756	0	-	79371	79371	8553170	2	285,554,	0,7831,
#Deleted in new
chr3_KI270924v1_alt	79373	87890	chr3_KI270924v1_alt:79373-87890	0	-	79373	79373	8553170	3	398,95,115,	0,7829,8402,
#Deleted in new
chr3_KI270924v1_alt	79397	87866	chr3_KI270924v1_alt:79397-87866	0	-	79397	79397	8553170	4	259,62,95,91,	0,1564,7805,8378,
#Deleted in new
chr3_KI270924v1_alt	79419	87866	chr3_KI270924v1_alt:79419-87866	0	-	79419	79419	8553170	4	237,62,95,258,	0,1542,7783,8189,
#Deleted in new
chr3_KI270924v1_alt	79454	87890	chr3_KI270924v1_alt:79454-87890	0	-	79454	79454	8553170	3	202,95,282,	0,7748,8154,
#Deleted in new
chr3_KI270924v1_alt	83920	87890	chr3_KI270924v1_alt:83920-87890	0	-	83920	83920	8553170	2	26,688,	0,3282,
#Deleted in new
chr3_KI270924v1_alt	84168	87897	chr3_KI270924v1_alt:84168-87897	0	-	84168	84168	8553170	3	310,95,289,	0,3034,3440,
#Deleted in new
chr3_KI270924v1_alt	84168	95723	chr3_KI270924v1_alt:84168-95723	1	-	84168	84168	8553170	3	310,704,1349,	0,3034,10206,
#Deleted in new
chr3_KI270924v1_alt	84168	106669	chr3_KI270924v1_alt:84168-106669	0	-	84168	84168	8553170	4	310,95,135,64,	0,3034,3607,22437,
#Deleted in new
chr3_KI270924v1_alt	84168	87866	chr3_KI270924v1_alt:84168-87866	0	-	84168	84168	8553170	3	287,85,91,	0,3362,3607,
#Deleted in new
chr3_KI270924v1_alt	84168	87913	chr3_KI270924v1_alt:84168-87913	0	-	84168	84168	8553170	3	310,95,138,	0,3034,3607,
#Deleted in new
chr3_KI270924v1_alt	84250	87866	chr3_KI270924v1_alt:84250-87866	1	-	84250	84250	8553170	3	228,413,91,	0,2952,3525,
#Deleted in new
chr3_KI270924v1_alt	84271	87890	chr3_KI270924v1_alt:84271-87890	0	-	84271	84271	8553170	4	207,95,127,115,	0,2931,3217,3504,
#Deleted in new
chr3_KI270924v1_alt	84274	87890	chr3_KI270924v1_alt:84274-87890	0	-	84274	84274	8553170	3	204,95,360,	0,2928,3256,
#Deleted in new
chr3_KI270924v1_alt	84304	87890	chr3_KI270924v1_alt:84304-87890	0	-	84304	84304	8553170	3	174,95,234,	0,2898,3352,
#Deleted in new
chr3_KI270924v1_alt	84354	107660	chr3_KI270924v1_alt:84354-107660	0	-	84354	84354	789624	5	124,95,135,100,414,	0,2848,3421,22251,22892,
#Deleted in new
chr3_KI270924v1_alt	84362	87910	chr3_KI270924v1_alt:84362-87910	0	-	84362	84362	8553170	4	116,95,85,135,	0,2840,3168,3413,
#Deleted in new
chr3_KI270924v1_alt	84362	96896	chr3_KI270924v1_alt:84362-96896	0	-	84362	84362	8553170	4	116,95,254,60,	0,2840,3294,12474,
#Deleted in new
chr3_KI270924v1_alt	84373	107397	chr3_KI270924v1_alt:84373-107397	0	-	84373	84373	8553170	4	105,95,135,151,	0,2829,3402,22873,
#Deleted in new
chr3_KI270924v1_alt	86456	87890	chr3_KI270924v1_alt:86456-87890	1	-	86456	86456	8553170	2	841,282,	0,1152,
#Deleted in new
chr3_KI270924v1_alt	86480	87890	chr3_KI270924v1_alt:86480-87890	0	-	86480	86480	8553170	2	817,115,	0,1295,
#Deleted in new
chr3_KI270924v1_alt	86657	87890	chr3_KI270924v1_alt:86657-87890	0	-	86657	86657	8553170	2	640,234,	0,999,
#Deleted in new
chr3_KI270924v1_alt	86771	87866	chr3_KI270924v1_alt:86771-87866	0	-	86771	86771	8553170	3	289,95,258,	0,431,837,
#Deleted in new
chr3_KI270924v1_alt	86824	87890	chr3_KI270924v1_alt:86824-87890	0	-	86824	86824	8553170	3	473,85,115,	0,706,951,
#Deleted in new
chr3_KI270924v1_alt	87207	110123	chr3_KI270924v1_alt:87207-110123	1	-	87207	87207	8553170	5	90,265,118,92,19,	0,20039,20517,22447,22897,
#Deleted in new
chr3_KI270924v1_alt	87234	99542	chr3_KI270924v1_alt:87234-99542	0	-	87234	87234	8553170	6	63,85,135,290,178,88,	0,296,541,7140,9602,12220,
#Deleted in new
chr3_KI270924v1_alt	87236	110223	chr3_KI270924v1_alt:87236-110223	0	-	87236	87236	8553170	6	61,135,63,100,265,127,	0,539,19199,19369,20010,22860,
#Deleted in new
chr3_KI270924v1_alt	87236	107374	chr3_KI270924v1_alt:87236-107374	0	-	87236	87236	8553170	4	61,302,178,128,	0,372,9600,20010,
#Deleted in new
chr3_KI270924v1_alt	87236	106693	chr3_KI270924v1_alt:87236-106693	0	-	87236	87236	8553170	6	61,302,53,178,229,88,	0,372,7375,9600,12218,19369,
#Deleted in new
chr3_KI270924v1_alt	87236	114765	chr3_KI270924v1_alt:87236-114765	1	-	87236	87236	8553170	8	61,135,290,178,229,114,131,23,	0,539,7138,9600,12218,24942,27141,27506,
#Deleted in new
chr3_KI270924v1_alt	87236	106646	chr3_KI270924v1_alt:87236-106646	1	-	87236	87236	8553170	4	674,121,178,41,	0,1681,9600,19369,
#Deleted in new
chr3_KI270924v1_alt	87236	107496	chr3_KI270924v1_alt:87236-107496	0	-	87236	87236	8553170	5	61,135,290,110,250,	0,539,7138,9600,20010,
#Deleted in new
chr3_KI270924v1_alt	87236	106666	chr3_KI270924v1_alt:87236-106666	0	-	87236	87236	8553170	5	61,85,135,63,61,	0,294,539,19199,19369,
#Deleted in new
chr3_KI270924v1_alt	87236	97381	chr3_KI270924v1_alt:87236-97381	0	-	87236	87236	8553170	2	61,545,	0,9600,
#Deleted in new
chr3_KI270924v1_alt	87236	89906	chr3_KI270924v1_alt:87236-89906	0	-	87236	87236	8553170	2	674,174,	0,2496,
#Deleted in new
chr3_KI270924v1_alt	87236	107286	chr3_KI270924v1_alt:87236-107286	1	-	87236	87236	8553170	6	61,254,82,116,178,40,	0,420,7138,7312,9600,20010,
#Deleted in new
chr3_KI270924v1_alt	87236	107264	chr3_KI270924v1_alt:87236-107264	0	-	87236	87236	8553170	6	61,116,178,229,100,18,	0,7312,9600,12218,19369,20010,
#Deleted in new
chr3_KI270924v1_alt	87236	102694	chr3_KI270924v1_alt:87236-102694	0	-	87236	87236	8553170	3	61,135,146,	0,539,15312,
#Deleted in new
chr3_KI270924v1_alt	87236	107523	chr3_KI270924v1_alt:87236-107523	0	-	87236	87236	8553170	5	61,302,178,100,277,	0,372,9600,19369,20010,
#Deleted in new
chr3_KI270924v1_alt	87236	94605	chr3_KI270924v1_alt:87236-94605	0	-	87236	87236	8553170	4	61,302,98,231,	0,372,1681,7138,
#Deleted in new
chr3_KI270924v1_alt	87236	107362	chr3_KI270924v1_alt:87236-107362	0	-	87236	87236	8553170	5	674,116,178,100,116,	0,7312,9600,19369,20010,
#Deleted in new
chr3_KI270924v1_alt	87236	89349	chr3_KI270924v1_alt:87236-89349	0	-	87236	87236	8553170	3	61,302,432,	0,372,1681,
#Deleted in new
chr3_KI270924v1_alt	87237	114428	chr3_KI270924v1_alt:87237-114428	0	-	87237	87237	8553170	4	60,265,114,51,	0,20009,24941,27140,
#Deleted in new
chr3_KI270924v1_alt	87237	107288	chr3_KI270924v1_alt:87237-107288	1	-	87237	87237	8553170	6	60,302,149,229,100,42,	0,371,9628,12217,19368,20009,
#Deleted in new
chr3_KI270924v1_alt	87239	90383	chr3_KI270924v1_alt:87239-90383	0	-	87239	87239	8553170	2	671,75,	0,3069,
#Deleted in new
chr3_KI270924v1_alt	87242	109729	chr3_KI270924v1_alt:87242-109729	1	-	87242	87242	8553170	8	55,302,53,178,100,265,128,75,	0,366,7369,9594,19363,20004,20482,22412,
#Deleted in new
chr3_KI270924v1_alt	87242	112271	chr3_KI270924v1_alt:87242-112271	0	-	87242	87242	8553170	6	55,135,178,229,265,93,	0,533,9594,12212,20004,24936,
#Deleted in new
chr3_KI270924v1_alt	87266	107393	chr3_KI270924v1_alt:87266-107393	1	-	87266	87266	8553170	4	644,63,100,147,	0,19169,19339,19980,
#Deleted in new
chr3_KI270924v1_alt	87269	96961	chr3_KI270924v1_alt:87269-96961	0	-	87269	87269	8553170	4	28,302,290,125,	0,339,7105,9567,
#Deleted in new
chr3_KI270924v1_alt	87283	94921	chr3_KI270924v1_alt:87283-94921	0	-	87283	87283	8553170	3	14,302,547,	0,325,7091,
#Deleted in new
chr3_KI270924v1_alt	87341	106630	chr3_KI270924v1_alt:87341-106630	0	-	87341	87341	8553170	3	569,178,25,	0,9495,19264,
#Deleted in new
chr3_KI270924v1_alt	87539	99607	chr3_KI270924v1_alt:87539-99607	0	-	87539	87539	8553170	3	371,178,153,	0,9297,11915,
#Deleted in new
chr3_KI270924v1_alt	87539	112290	chr3_KI270924v1_alt:87539-112290	0	-	87539	87539	8553170	4	371,121,265,112,	0,1378,19707,24639,
#Deleted in new
chr3_KI270924v1_alt	87539	112294	chr3_KI270924v1_alt:87539-112294	0	-	87539	87539	8553170	4	371,265,122,116,	0,19707,22565,24639,
#Deleted in new
chr3_KI270924v1_alt	87575	107462	chr3_KI270924v1_alt:87575-107462	0	-	87575	87575	8553170	3	335,178,216,	0,9261,19671,
#Deleted in new
chr3_KI270924v1_alt	87673	97005	chr3_KI270924v1_alt:87673-97005	1	-	87673	87673	8553170	4	237,260,290,169,	0,5928,6701,9163,
#Deleted in new
chr3_KI270924v1_alt	87698	112211	chr3_KI270924v1_alt:87698-112211	0	-	87698	87698	8553170	3	212,265,33,	0,19548,24480,
#Deleted in new
chr3_KI270924v1_alt	87718	114428	chr3_KI270924v1_alt:87718-114428	1	-	87718	87718	8553170	7	192,100,265,118,122,114,51,	0,18887,19528,20006,22386,24460,26659,
#Deleted in new
chr3_KI270924v1_alt	87775	112294	chr3_KI270924v1_alt:87775-112294	0	-	87775	87775	8553170	5	135,100,265,115,116,	0,18830,19471,21550,24403,
#Deleted in new
chr3_KI270924v1_alt	87813	114428	chr3_KI270924v1_alt:87813-114428	0	-	87813	87813	8553170	6	97,100,265,122,114,51,	0,18792,19433,22291,24365,26564,
#Deleted in new
chr3_KI270924v1_alt	94422	97398	chr3_KI270924v1_alt:94422-97398	0	-	94422	94422	8553170	2	242,562,	0,2414,
#Deleted in new
chr3_KI270924v1_alt	94459	108223	chr3_KI270924v1_alt:94459-108223	1	-	94459	94459	8553170	6	205,178,229,100,265,499,	0,2377,4995,12146,12787,13265,
#Deleted in new
chr3_KI270924v1_alt	94529	109627	chr3_KI270924v1_alt:94529-109627	0	-	94529	94529	8553170	4	135,178,265,202,	0,2307,12717,14896,
#Deleted in new
chr3_KI270924v1_alt	94636	109741	chr3_KI270924v1_alt:94636-109741	1	-	94636	94636	8553170	6	28,178,229,265,112,45,	0,2200,4818,12610,14689,15060,
#Deleted in new
chr3_KI270924v1_alt	96729	106707	chr3_KI270924v1_alt:96729-106707	0	-	96729	96729	8553170	3	285,229,102,	0,2725,9876,
#Deleted in new
chr3_KI270924v1_alt	96873	108223	chr3_KI270924v1_alt:96873-108223	0	-	96873	96873	8553170	4	141,100,265,499,	0,9732,10373,10851,
#Deleted in new
chr3_KI270924v1_alt	96927	107618	chr3_KI270924v1_alt:96927-107618	0	-	96927	96927	8553170	5	87,229,63,100,372,	0,2527,9508,9678,10319,
#Deleted in new
chr3_KI270924v1_alt	99489	106619	chr3_KI270924v1_alt:99489-106619	0	-	99489	99489	8553170	2	194,184,	0,6946,
#Deleted in new
chr3_KI270924v1_alt	99502	107677	chr3_KI270924v1_alt:99502-107677	0	-	99502	99502	8553170	3	181,100,431,	0,7103,7744,
#Deleted in new
chr3_KI270924v1_alt	99519	114441	chr3_KI270924v1_alt:99519-114441	0	-	99519	99519	8553170	5	164,265,122,114,64,	0,7727,10585,12659,14858,
#Deleted in new
chr3_KI270924v1_alt	99564	107933	chr3_KI270924v1_alt:99564-107933	0	-	99564	99564	8553170	2	119,687,	0,7682,
#Deleted in new
chr3_KI270924v1_alt	99618	118260	chr3_KI270924v1_alt:99618-118260	0	-	99618	99618	8553170	7	65,100,265,114,131,112,65,	0,6987,7628,12560,14759,15124,18577,
#Deleted in new
chr3_KI270924v1_alt	106605	115152	chr3_KI270924v1_alt:106605-115152	0	-	106605	106605	8553170	6	100,265,114,131,112,70,	0,641,5573,7772,8137,8477,
#Deleted in new
chr3_KI270924v1_alt	107181	137979	chr3_KI270924v1_alt:107181-137979	0	-	107181	107181	789624	14	330,114,131,112,122,170,196,169,123,149,165,163,86,101,	0,4997,7196,7561,11014,14875,16183,17562,20221,22648,24612,26129,27021,30697,
#Deleted in new
chr3_KI270924v1_alt	107273	109832	chr3_KI270924v1_alt:107273-109832	1	-	107273	107273	8553170	4	238,122,187,136,	0,451,2152,2423,
#Deleted in new
chr3_KI270924v1_alt	107490	114175	chr3_KI270924v1_alt:107490-114175	0	-	107490	107490	8553170	3	21,114,349,	0,4688,6336,
#Deleted in new
chr3_KI270924v1_alt	109325	112267	chr3_KI270924v1_alt:109325-112267	0	-	109325	109325	8553170	4	112,92,122,89,	0,329,779,2853,
#Deleted in new
chr3_KI270924v1_alt	109672	114056	chr3_KI270924v1_alt:109672-114056	0	-	109672	109672	8553170	3	554,114,230,	0,2506,4154,
#Deleted in new
chr3_KI270924v1_alt	109696	114478	chr3_KI270924v1_alt:109696-114478	0	-	109696	109696	8553170	3	530,114,101,	0,2482,4681,
#Deleted in new
chr3_KI270924v1_alt	109703	112584	chr3_KI270924v1_alt:109703-112584	0	-	109703	109703	8553170	2	523,406,	0,2475,
#Deleted in new
chr3_KI270924v1_alt	109783	113673	chr3_KI270924v1_alt:109783-113673	0	-	109783	109783	8553170	3	443,114,51,	0,2395,3839,
#Deleted in new
chr3_KI270924v1_alt	109903	137967	chr3_KI270924v1_alt:109903-137967	1	-	109903	109903	8553170	14	2389,131,112,122,170,196,169,123,149,165,144,163,86,89,	0,4474,4839,8292,12153,13461,14840,17499,19926,21890,22373,23407,24299,27975,
#Deleted in new
chr3_KI270924v1_alt	110139	137948	chr3_KI270924v1_alt:110139-137948	7	-	110139	110139	16724991	15	87,114,131,112,122,170,196,169,123,149,165,144,163,86,70,	0,2039,4238,4603,8056,11917,13225,14604,17263,19690,21654,22137,23171,24063,27739,
#Deleted in new
chr3_KI270924v1_alt	113950	118289	chr3_KI270924v1_alt:113950-118289	0	-	113950	113950	8553170	3	558,112,94,	0,792,4245,
#Deleted in new
chr3_KI270924v1_alt	117976	123437	chr3_KI270924v1_alt:117976-123437	0	-	117976	117976	8553170	3	341,170,73,	0,4080,5388,
#Deleted in new
chr3_KI270924v1_alt	124252	137971	chr3_KI270924v1_alt:124252-137971	1	-	124252	124252	8553170	7	660,123,149,165,163,86,93,	0,3150,5577,7541,9058,9950,13626,
#Deleted in new
chr3_KI270924v1_alt	129361	137982	chr3_KI270924v1_alt:129361-137982	1	-	129361	129361	8553170	6	617,165,144,163,86,104,	0,2432,2915,3949,4841,8517,
#Deleted in new
chr3_KI270924v1_alt	131755	137951	chr3_KI270924v1_alt:131755-137951	0	-	131755	131755	8553170	4	203,163,86,73,	0,1555,2447,6123,
#Deleted in new
chr3_KI270924v1_alt	131934	137979	chr3_KI270924v1_alt:131934-137979	1	-	131934	131934	8553170	5	24,209,163,86,101,	0,277,1376,2268,5944,
#Deleted in new
chr3_KI270924v1_alt	138116	140479	chr3_KI270924v1_alt:138116-140479	3	+	138116	138116	8553170	3	623,90,971,	0,1197,1392,
#Deleted in new
chr3_KI270924v1_alt	144571	145898	chr3_KI270924v1_alt:144571-145898	7	+	144571	144571	16724991	2	748,322,	0,1005,
#Deleted in new
chr3_KI270934v1_alt	3234	35611	chr3_KI270934v1_alt:3234-35611	1	+	3234	35611	789624	16	12712,153,134,165,156,131,89,180,126,120,209,91,168,102,234,137,	0,13046,17196,19685,21130,22349,24750,26052,26379,27337,27860,28556,29247,29916,30384,32240,
#Deleted in new
chr3_KI270934v1_alt	3234	47563	chr3_KI270934v1_alt:3234-47563	1	+	3234	47560	789624	25	2884,84,153,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,208,	0,12628,13046,17196,19685,21130,22349,24750,26052,26379,27337,27860,28556,29247,29916,30384,32240,34173,37129,38271,39055,40230,40389,42437,44121,
#Deleted in new
chr3_KI270934v1_alt	3238	47678	chr3_KI270934v1_alt:3238-47678	0	+	3238	28016	789624	24	12708,153,134,165,156,103,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270934v1_alt	3238	47678	chr3_KI270934v1_alt:3238-47678	0	+	3238	28050	789624	23	12708,153,134,89,103,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19757,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270934v1_alt	3238	47678	chr3_KI270934v1_alt:3238-47678	0	+	3238	24401	789624	24	12708,153,134,89,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19757,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270934v1_alt	3238	47969	chr3_KI270934v1_alt:3238-47969	0	+	3238	41550	789624	23	12708,153,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,180,74,65,224,163,614,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270934v1_alt	3238	47678	chr3_KI270934v1_alt:3238-47678	0	+	3238	24401	789624	22	12708,167,134,165,156,131,89,180,126,120,209,91,168,102,234,138,154,74,65,224,163,323,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,38293,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270934v1_alt	3238	47678	chr3_KI270934v1_alt:3238-47678	0	+	3238	28016	789624	23	12708,153,134,165,103,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19681,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270934v1_alt	3238	47678	chr3_KI270934v1_alt:3238-47678	2	+	3238	24401	789624	24	12708,167,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270934v1_alt	3238	47678	chr3_KI270934v1_alt:3238-47678	0	+	3238	47560	789624	23	12708,153,134,165,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19681,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270934v1_alt	3238	47969	chr3_KI270934v1_alt:3238-47969	0	+	3238	47560	789624	24	12708,153,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,614,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270934v1_alt	3238	47678	chr3_KI270934v1_alt:3238-47678	0	+	3238	28016	789624	23	12708,153,134,89,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19757,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270934v1_alt	9381	11241	chr3_KI270934v1_alt:9381-11241	1	+	9381	11241	789624	2	568,1244,	0,616,
#Deleted in new
chr3_KI270934v1_alt	15925	47969	chr3_KI270934v1_alt:15925-47969	0	+	15925	24401	789624	24	21,153,134,89,156,103,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,614,	0,355,4505,7070,8439,9658,12059,13361,13688,14646,15169,15865,16556,17225,17693,19549,21482,24438,25580,26364,27539,27698,29746,31430,
#Deleted in new
chr3_KI270934v1_alt	15925	47969	chr3_KI270934v1_alt:15925-47969	0	+	15925	24401	789624	23	21,167,134,165,156,131,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,614,	0,355,4505,6994,8439,9658,13361,13688,14646,15169,15865,16556,17225,17693,19549,21482,24438,25580,26364,27539,27698,29746,31430,
#Deleted in new
chr3_KI270934v1_alt	15925	47969	chr3_KI270934v1_alt:15925-47969	0	+	15925	24401	789624	23	21,153,134,89,156,131,89,180,126,120,209,91,168,102,234,138,182,180,74,65,224,163,614,	0,355,4505,7070,8439,9658,12059,13361,13688,14646,15169,15865,16556,17225,17693,19549,21482,25580,26364,27539,27698,29746,31430,
#Deleted in new
chr3_KI270934v1_alt	15925	47969	chr3_KI270934v1_alt:15925-47969	0	+	15925	24401	789624	23	21,153,134,89,156,131,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,614,	0,355,4505,7070,8439,9658,13361,13688,14646,15169,15865,16556,17225,17693,19549,21482,24438,25580,26364,27539,27698,29746,31430,
#Deleted in new
chr3_KI270934v1_alt	15925	47969	chr3_KI270934v1_alt:15925-47969	0	+	15925	23856	789624	24	21,167,134,165,209,156,131,89,180,126,120,209,91,168,102,234,138,182,180,74,65,224,163,614,	0,355,4505,6994,7924,8439,9658,12059,13361,13688,14646,15169,15865,16556,17225,17693,19549,21482,25580,26364,27539,27698,29746,31430,
#Deleted in new
chr3_KI270934v1_alt	16219	84808	chr3_KI270934v1_alt:16219-84808	0	-	16219	16219	8553170	3	7,430,115,	0,67566,68474,
#Deleted in new
chr3_KI270934v1_alt	16219	84784	chr3_KI270934v1_alt:16219-84784	0	-	16219	16219	8553170	4	7,216,95,91,	0,65366,67901,68474,
#Deleted in new
chr3_KI270934v1_alt	16219	84782	chr3_KI270934v1_alt:16219-84782	1	-	16219	16219	8553170	5	7,177,62,95,89,	0,61438,62944,67901,68474,
#Deleted in new
chr3_KI270934v1_alt	16219	84784	chr3_KI270934v1_alt:16219-84784	0	-	16219	16219	8553170	4	7,258,95,91,	0,61357,67901,68474,
#Deleted in new
chr3_KI270934v1_alt	16280	47969	chr3_KI270934v1_alt:16280-47969	0	+	16280	47560	789624	23	153,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,614,	0,4150,6639,8084,9303,11704,13006,13333,14291,14814,15510,16201,16870,17338,19194,21127,24083,25225,26009,27184,27343,29391,31075,
#Deleted in new
chr3_KI270934v1_alt	20430	47969	chr3_KI270934v1_alt:20430-47969	0	+	20430	47560	789624	22	134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,614,	0,2489,3934,5153,7554,8856,9183,10141,10664,11360,12051,12720,13188,15044,16977,19933,21075,21859,23034,23193,25241,26925,
#Deleted in new
chr3_KI270934v1_alt	25047	28074	chr3_KI270934v1_alt:25047-28074	0	+	25047	25047	8553170	3	332,131,90,	0,536,2937,
#Deleted in new
chr3_KI270934v1_alt	40741	47563	chr3_KI270934v1_alt:40741-47563	0	+	40741	40741	8553170	6	944,74,65,224,163,208,	0,1548,2723,2882,4930,6614,
#Deleted in new
chr3_KI270934v1_alt	41632	44129	chr3_KI270934v1_alt:41632-44129	0	+	41632	41632	8553170	4	53,74,65,506,	0,657,1832,1991,
#Deleted in new
chr3_KI270934v1_alt	42215	44880	chr3_KI270934v1_alt:42215-44880	0	+	42215	42215	8553170	2	1314,1257,	0,1408,
#Deleted in new
chr3_KI270934v1_alt	53607	68330	chr3_KI270934v1_alt:53607-68330	2	-	53743	68330	789624	4	142,84,92,203,	0,1193,11353,14520,
#Deleted in new
chr3_KI270934v1_alt	54766	84779	chr3_KI270934v1_alt:54766-84779	0	-	54766	54766	8553170	3	118,95,253,	0,29354,29760,
#Deleted in new
chr3_KI270934v1_alt	59671	84676	chr3_KI270934v1_alt:59671-84676	0	-	59671	59671	8553170	3	309,95,150,	0,24449,24855,
#Deleted in new
chr3_KI270934v1_alt	59702	73316	chr3_KI270934v1_alt:59702-73316	1	-	59869	73192	789624	4	278,92,1380,200,	0,5258,8425,13414,
#Deleted in new
chr3_KI270934v1_alt	59959	84236	chr3_KI270934v1_alt:59959-84236	0	-	59959	59959	8553170	3	21,92,116,	0,5001,24161,
#Deleted in new
chr3_KI270934v1_alt	61182	69960	chr3_KI270934v1_alt:61182-69960	1	-	61517	69478	789624	3	404,92,1833,	0,3778,6945,
#Deleted in new
chr3_KI270934v1_alt	61184	84808	chr3_KI270934v1_alt:61184-84808	0	-	61184	61184	8553170	4	402,92,95,115,	0,3776,22936,23509,
#Deleted in new
chr3_KI270934v1_alt	61184	84808	chr3_KI270934v1_alt:61184-84808	0	-	61184	61184	8553170	2	402,688,	0,22936,
#Deleted in new
chr3_KI270934v1_alt	61184	73318	chr3_KI270934v1_alt:61184-73318	1	-	61517	73192	789624	4	402,92,1380,202,	0,3776,6943,11932,
#Deleted in new
chr3_KI270934v1_alt	61186	84712	chr3_KI270934v1_alt:61186-84712	0	-	61186	61186	8553170	3	400,95,138,	0,22934,23388,
#Deleted in new
chr3_KI270934v1_alt	61229	84379	chr3_KI270934v1_alt:61229-84379	0	-	61229	61229	8553170	3	357,92,259,	0,3731,22891,
#Deleted in new
chr3_KI270934v1_alt	61357	84808	chr3_KI270934v1_alt:61357-84808	1	-	61357	61357	8553170	5	229,92,209,95,115,	0,3603,3791,22763,23336,
#Deleted in new
chr3_KI270934v1_alt	61380	84777	chr3_KI270934v1_alt:61380-84777	0	-	61380	61380	8553170	4	206,283,95,84,	0,14618,22740,23313,
#Deleted in new
chr3_KI270934v1_alt	61389	84808	chr3_KI270934v1_alt:61389-84808	0	-	61389	61389	8553170	4	197,92,95,282,	0,3571,22731,23137,
#Deleted in new
chr3_KI270934v1_alt	61423	84808	chr3_KI270934v1_alt:61423-84808	0	-	61423	61423	8553170	4	163,95,85,115,	0,22697,23025,23270,
#Deleted in new
chr3_KI270934v1_alt	61475	84808	chr3_KI270934v1_alt:61475-84808	0	-	61475	61475	8553170	5	111,92,170,95,234,	0,3485,14523,22645,23099,
#Deleted in new
chr3_KI270934v1_alt	61491	84808	chr3_KI270934v1_alt:61491-84808	0	-	61491	61491	8553170	4	95,283,95,282,	0,14507,22629,23035,
#Deleted in new
chr3_KI270934v1_alt	61539	84784	chr3_KI270934v1_alt:61539-84784	1	-	61539	61539	8553170	5	47,92,283,95,258,	0,3421,14459,22581,22987,
#Deleted in new
chr3_KI270934v1_alt	64577	68519	chr3_KI270934v1_alt:64577-68519	0	-	64577	64577	8553170	2	475,392,	0,3550,
#Deleted in new
chr3_KI270934v1_alt	65164	84808	chr3_KI270934v1_alt:65164-84808	0	-	65164	65164	8553170	3	193,95,282,	0,18956,19362,
#Deleted in new
chr3_KI270934v1_alt	68999	84808	chr3_KI270934v1_alt:68999-84808	0	-	68999	68999	8553170	3	508,95,115,	0,15121,15694,
#Deleted in new
chr3_KI270934v1_alt	69092	73225	chr3_KI270934v1_alt:69092-73225	0	-	69092	69092	8553170	2	470,109,	0,4024,
#Deleted in new
chr3_KI270934v1_alt	69105	84482	chr3_KI270934v1_alt:69105-84482	0	-	69105	69105	8553170	2	402,362,	0,15015,
#Deleted in new
chr3_KI270934v1_alt	69131	84784	chr3_KI270934v1_alt:69131-84784	1	-	69131	69131	8553170	4	376,170,95,210,	0,6867,14989,15443,
#Deleted in new
chr3_KI270934v1_alt	69156	84808	chr3_KI270934v1_alt:69156-84808	0	-	69156	69156	8553170	3	351,95,282,	0,14964,15370,
#Deleted in new
chr3_KI270934v1_alt	69164	84800	chr3_KI270934v1_alt:69164-84800	1	-	69164	69164	8553170	4	343,153,95,107,	0,6834,14956,15529,
#Deleted in new
chr3_KI270934v1_alt	69310	84784	chr3_KI270934v1_alt:69310-84784	0	-	69310	69310	8553170	4	197,95,85,91,	0,14810,15138,15383,
#Deleted in new
chr3_KI270934v1_alt	69368	84807	chr3_KI270934v1_alt:69368-84807	0	-	69368	69368	8553170	4	139,173,95,114,	0,6630,14752,15325,
#Deleted in new
chr3_KI270934v1_alt	69369	73249	chr3_KI270934v1_alt:69369-73249	0	-	69369	69369	8553170	3	138,318,133,	0,2001,3747,
#Deleted in new
chr3_KI270934v1_alt	69386	84808	chr3_KI270934v1_alt:69386-84808	0	-	69386	69386	8553170	4	121,318,95,115,	0,1984,14734,15307,
#Deleted in new
chr3_KI270934v1_alt	69419	84808	chr3_KI270934v1_alt:69419-84808	0	-	69419	69419	8553170	4	88,318,95,282,	0,1951,14701,15107,
#Deleted in new
chr3_KI270934v1_alt	69433	84720	chr3_KI270934v1_alt:69433-84720	1	-	69433	69433	8553170	3	74,318,600,	0,1937,14687,
#Deleted in new
chr3_KI270934v1_alt	69449	91405	chr3_KI270934v1_alt:69449-91405	0	-	69449	69449	8553170	5	58,170,95,302,113,	0,6549,14671,15077,21843,
#Deleted in new
chr3_KI270934v1_alt	69802	84305	chr3_KI270934v1_alt:69802-84305	0	-	69802	69802	8553170	3	138,173,185,	0,6196,14318,
#Deleted in new
chr3_KI270934v1_alt	69885	84808	chr3_KI270934v1_alt:69885-84808	0	-	69885	69885	8553170	4	55,318,95,282,	0,1485,14235,14641,
#Deleted in new
chr3_KI270934v1_alt	71445	91323	chr3_KI270934v1_alt:71445-91323	0	-	71445	71445	8553170	4	243,95,135,31,	0,12675,13248,19847,
#Deleted in new
chr3_KI270934v1_alt	71475	84808	chr3_KI270934v1_alt:71475-84808	0	-	71475	71475	8553170	4	213,170,95,115,	0,4523,12645,13218,
#Deleted in new
chr3_KI270934v1_alt	71539	84804	chr3_KI270934v1_alt:71539-84804	1	-	71539	71539	8553170	5	149,173,95,85,111,	0,4459,12581,12909,13154,
#Deleted in new
chr3_KI270934v1_alt	72151	84784	chr3_KI270934v1_alt:72151-84784	0	-	72151	72151	8553170	3	325,95,91,	0,11969,12542,
#Deleted in new
chr3_KI270934v1_alt	75183	84784	chr3_KI270934v1_alt:75183-84784	0	-	75183	75183	8553170	2	405,664,	0,8937,
#Deleted in new
chr3_KI270934v1_alt	75303	84784	chr3_KI270934v1_alt:75303-84784	0	-	75303	75303	8553170	4	285,173,95,91,	0,695,8817,9390,
#Deleted in new
chr3_KI270934v1_alt	75515	84784	chr3_KI270934v1_alt:75515-84784	0	-	75515	75515	8553170	4	73,283,95,91,	0,483,8605,9178,
#Deleted in new
chr3_KI270934v1_alt	75998	84756	chr3_KI270934v1_alt:75998-84756	0	-	75998	75998	8553170	3	283,95,182,	0,8122,8576,
#Deleted in new
chr3_KI270934v1_alt	76075	84784	chr3_KI270934v1_alt:76075-84784	0	-	76075	76075	8553170	3	206,95,210,	0,8045,8499,
#Deleted in new
chr3_KI270934v1_alt	76185	84808	chr3_KI270934v1_alt:76185-84808	0	-	76185	76185	8553170	3	96,95,282,	0,7935,8341,
#Deleted in new
chr3_KI270934v1_alt	76414	84784	chr3_KI270934v1_alt:76414-84784	0	-	76414	76414	8553170	3	269,95,91,	0,7706,8279,
#Deleted in new
chr3_KI270934v1_alt	76416	84808	chr3_KI270934v1_alt:76416-84808	0	-	76416	76416	8553170	2	267,688,	0,7704,
#Deleted in new
chr3_KI270934v1_alt	76417	84784	chr3_KI270934v1_alt:76417-84784	0	-	76417	76417	8553170	3	207,95,91,	0,7703,8276,
#Deleted in new
chr3_KI270934v1_alt	76448	84808	chr3_KI270934v1_alt:76448-84808	0	-	76448	76448	8553170	2	176,688,	0,7672,
#Deleted in new
chr3_KI270934v1_alt	76455	84808	chr3_KI270934v1_alt:76455-84808	0	-	76455	76455	8553170	4	228,95,85,115,	0,7665,7993,8238,
#Deleted in new
chr3_KI270934v1_alt	76462	84808	chr3_KI270934v1_alt:76462-84808	0	-	76462	76462	8553170	3	221,95,282,	0,7658,8064,
#Deleted in new
chr3_KI270934v1_alt	76469	84784	chr3_KI270934v1_alt:76469-84784	0	-	76469	76469	8553170	3	214,95,210,	0,7651,8105,
#Deleted in new
chr3_KI270934v1_alt	76539	84808	chr3_KI270934v1_alt:76539-84808	0	-	76539	76539	8553170	3	144,95,360,	0,7581,7909,
#Deleted in new
chr3_KI270934v1_alt	77251	84808	chr3_KI270934v1_alt:77251-84808	0	-	77251	77251	8553170	3	583,95,115,	0,6869,7442,
#Deleted in new
chr3_KI270934v1_alt	77410	84808	chr3_KI270934v1_alt:77410-84808	1	-	77410	77410	8553170	3	54,53,688,	0,371,6710,
#Deleted in new
chr3_KI270934v1_alt	77547	84808	chr3_KI270934v1_alt:77547-84808	0	-	77547	77547	8553170	4	287,95,85,115,	0,6573,6901,7146,
#Deleted in new
chr3_KI270934v1_alt	77548	84808	chr3_KI270934v1_alt:77548-84808	0	-	77548	77548	8553170	3	286,95,234,	0,6572,7026,
#Deleted in new
chr3_KI270934v1_alt	77549	84674	chr3_KI270934v1_alt:77549-84674	0	-	77549	77549	8553170	2	285,554,	0,6571,
#Deleted in new
chr3_KI270934v1_alt	77551	84808	chr3_KI270934v1_alt:77551-84808	0	-	77551	77551	8553170	3	398,95,115,	0,6569,7142,
#Deleted in new
chr3_KI270934v1_alt	77575	84784	chr3_KI270934v1_alt:77575-84784	0	-	77575	77575	8553170	4	259,62,95,91,	0,1588,6545,7118,
#Deleted in new
chr3_KI270934v1_alt	77597	84784	chr3_KI270934v1_alt:77597-84784	0	-	77597	77597	8553170	4	237,62,95,258,	0,1566,6523,6929,
#Deleted in new
chr3_KI270934v1_alt	77632	84808	chr3_KI270934v1_alt:77632-84808	0	-	77632	77632	8553170	3	202,95,282,	0,6488,6894,
#Deleted in new
chr3_KI270934v1_alt	81243	84808	chr3_KI270934v1_alt:81243-84808	0	-	81243	81243	8553170	2	26,688,	0,2877,
#Deleted in new
chr3_KI270934v1_alt	81491	84815	chr3_KI270934v1_alt:81491-84815	0	-	81491	81491	8553170	3	310,95,289,	0,2629,3035,
#Deleted in new
chr3_KI270934v1_alt	81491	84831	chr3_KI270934v1_alt:81491-84831	0	-	81491	81491	8553170	3	310,95,138,	0,2629,3202,
#Deleted in new
chr3_KI270934v1_alt	81491	103587	chr3_KI270934v1_alt:81491-103587	0	-	81491	81491	8553170	4	310,95,135,64,	0,2629,3202,22032,
#Deleted in new
chr3_KI270934v1_alt	81491	84784	chr3_KI270934v1_alt:81491-84784	0	-	81491	81491	8553170	3	287,85,91,	0,2957,3202,
#Deleted in new
chr3_KI270934v1_alt	81491	92641	chr3_KI270934v1_alt:81491-92641	1	-	81491	81491	8553170	3	310,704,1349,	0,2629,9801,
#Deleted in new
chr3_KI270934v1_alt	81573	84784	chr3_KI270934v1_alt:81573-84784	1	-	81573	81573	8553170	3	228,413,91,	0,2547,3120,
#Deleted in new
chr3_KI270934v1_alt	81594	84808	chr3_KI270934v1_alt:81594-84808	0	-	81594	81594	8553170	4	207,95,127,115,	0,2526,2812,3099,
#Deleted in new
chr3_KI270934v1_alt	81597	84808	chr3_KI270934v1_alt:81597-84808	0	-	81597	81597	8553170	3	204,95,360,	0,2523,2851,
#Deleted in new
chr3_KI270934v1_alt	81627	84808	chr3_KI270934v1_alt:81627-84808	0	-	81627	81627	8553170	3	174,95,234,	0,2493,2947,
#Deleted in new
chr3_KI270934v1_alt	81677	104578	chr3_KI270934v1_alt:81677-104578	0	-	81677	81677	789624	5	124,95,135,100,414,	0,2443,3016,21846,22487,
#Deleted in new
chr3_KI270934v1_alt	81685	84828	chr3_KI270934v1_alt:81685-84828	0	-	81685	81685	8553170	4	116,95,85,135,	0,2435,2763,3008,
#Deleted in new
chr3_KI270934v1_alt	81685	93814	chr3_KI270934v1_alt:81685-93814	0	-	81685	81685	8553170	4	116,95,254,60,	0,2435,2889,12069,
#Deleted in new
chr3_KI270934v1_alt	81696	104315	chr3_KI270934v1_alt:81696-104315	0	-	81696	81696	8553170	4	105,95,135,151,	0,2424,2997,22468,
#Deleted in new
chr3_KI270934v1_alt	83374	84808	chr3_KI270934v1_alt:83374-84808	1	-	83374	83374	8553170	2	841,282,	0,1152,
#Deleted in new
chr3_KI270934v1_alt	83398	84808	chr3_KI270934v1_alt:83398-84808	0	-	83398	83398	8553170	2	817,115,	0,1295,
#Deleted in new
chr3_KI270934v1_alt	83575	84808	chr3_KI270934v1_alt:83575-84808	0	-	83575	83575	8553170	2	640,234,	0,999,
#Deleted in new
chr3_KI270934v1_alt	83689	84784	chr3_KI270934v1_alt:83689-84784	0	-	83689	83689	8553170	3	289,95,258,	0,431,837,
#Deleted in new
chr3_KI270934v1_alt	83742	84808	chr3_KI270934v1_alt:83742-84808	0	-	83742	83742	8553170	3	473,85,115,	0,706,951,
#Deleted in new
chr3_KI270934v1_alt	84125	107041	chr3_KI270934v1_alt:84125-107041	1	-	84125	84125	8553170	5	90,265,118,92,19,	0,20039,20517,22447,22897,
#Deleted in new
chr3_KI270934v1_alt	84152	96460	chr3_KI270934v1_alt:84152-96460	0	-	84152	84152	8553170	6	63,85,135,290,178,88,	0,296,541,7140,9602,12220,
#Deleted in new
chr3_KI270934v1_alt	84154	104414	chr3_KI270934v1_alt:84154-104414	0	-	84154	84154	8553170	5	61,135,290,110,250,	0,539,7138,9600,20010,
#Deleted in new
chr3_KI270934v1_alt	84154	86824	chr3_KI270934v1_alt:84154-86824	0	-	84154	84154	8553170	2	674,174,	0,2496,
#Deleted in new
chr3_KI270934v1_alt	84154	111683	chr3_KI270934v1_alt:84154-111683	1	-	84154	84154	8553170	8	61,135,290,178,229,114,131,23,	0,539,7138,9600,12218,24942,27141,27506,
#Deleted in new
chr3_KI270934v1_alt	84154	104182	chr3_KI270934v1_alt:84154-104182	0	-	84154	84154	8553170	6	61,116,178,229,100,18,	0,7312,9600,12218,19369,20010,
#Deleted in new
chr3_KI270934v1_alt	84154	107141	chr3_KI270934v1_alt:84154-107141	0	-	84154	84154	8553170	6	61,135,63,100,265,127,	0,539,19199,19369,20010,22860,
#Deleted in new
chr3_KI270934v1_alt	84154	104204	chr3_KI270934v1_alt:84154-104204	3	-	84154	84154	8553170	6	61,254,82,116,178,40,	0,420,7138,7312,9600,20010,
#Deleted in new
chr3_KI270934v1_alt	84154	104292	chr3_KI270934v1_alt:84154-104292	0	-	84154	84154	8553170	4	61,302,178,128,	0,372,9600,20010,
#Deleted in new
chr3_KI270934v1_alt	84154	91523	chr3_KI270934v1_alt:84154-91523	0	-	84154	84154	8553170	4	61,302,98,231,	0,372,1681,7138,
#Deleted in new
chr3_KI270934v1_alt	84154	104441	chr3_KI270934v1_alt:84154-104441	0	-	84154	84154	8553170	5	61,302,178,100,277,	0,372,9600,19369,20010,
#Deleted in new
chr3_KI270934v1_alt	84154	104280	chr3_KI270934v1_alt:84154-104280	0	-	84154	84154	8553170	5	674,116,178,100,116,	0,7312,9600,19369,20010,
#Deleted in new
chr3_KI270934v1_alt	84154	103584	chr3_KI270934v1_alt:84154-103584	0	-	84154	84154	8553170	5	61,85,135,63,61,	0,294,539,19199,19369,
#Deleted in new
chr3_KI270934v1_alt	84154	94299	chr3_KI270934v1_alt:84154-94299	0	-	84154	84154	8553170	2	61,545,	0,9600,
#Deleted in new
chr3_KI270934v1_alt	84154	86267	chr3_KI270934v1_alt:84154-86267	0	-	84154	84154	8553170	3	61,302,432,	0,372,1681,
#Deleted in new
chr3_KI270934v1_alt	84154	99612	chr3_KI270934v1_alt:84154-99612	0	-	84154	84154	8553170	3	61,135,146,	0,539,15312,
#Deleted in new
chr3_KI270934v1_alt	84154	103611	chr3_KI270934v1_alt:84154-103611	0	-	84154	84154	8553170	6	61,302,53,178,229,88,	0,372,7375,9600,12218,19369,
#Deleted in new
chr3_KI270934v1_alt	84154	103564	chr3_KI270934v1_alt:84154-103564	1	-	84154	84154	8553170	4	674,121,178,41,	0,1681,9600,19369,
#Deleted in new
chr3_KI270934v1_alt	84155	111346	chr3_KI270934v1_alt:84155-111346	0	-	84155	84155	8553170	4	60,265,114,51,	0,20009,24941,27140,
#Deleted in new
chr3_KI270934v1_alt	84155	104206	chr3_KI270934v1_alt:84155-104206	1	-	84155	84155	8553170	6	60,302,149,229,100,42,	0,371,9628,12217,19368,20009,
#Deleted in new
chr3_KI270934v1_alt	84157	87301	chr3_KI270934v1_alt:84157-87301	0	-	84157	84157	8553170	2	671,75,	0,3069,
#Deleted in new
chr3_KI270934v1_alt	84160	109189	chr3_KI270934v1_alt:84160-109189	0	-	84160	84160	8553170	6	55,135,178,229,265,93,	0,533,9594,12212,20004,24936,
#Deleted in new
chr3_KI270934v1_alt	84160	106647	chr3_KI270934v1_alt:84160-106647	1	-	84160	84160	8553170	8	55,302,53,178,100,265,128,75,	0,366,7369,9594,19363,20004,20482,22412,
#Deleted in new
chr3_KI270934v1_alt	84184	104311	chr3_KI270934v1_alt:84184-104311	1	-	84184	84184	8553170	4	644,63,100,147,	0,19169,19339,19980,
#Deleted in new
chr3_KI270934v1_alt	84187	93879	chr3_KI270934v1_alt:84187-93879	0	-	84187	84187	8553170	4	28,302,290,125,	0,339,7105,9567,
#Deleted in new
chr3_KI270934v1_alt	84201	91839	chr3_KI270934v1_alt:84201-91839	0	-	84201	84201	8553170	3	14,302,547,	0,325,7091,
#Deleted in new
chr3_KI270934v1_alt	84259	103548	chr3_KI270934v1_alt:84259-103548	0	-	84259	84259	8553170	3	569,178,25,	0,9495,19264,
#Deleted in new
chr3_KI270934v1_alt	84457	96525	chr3_KI270934v1_alt:84457-96525	0	-	84457	84457	8553170	3	371,178,153,	0,9297,11915,
#Deleted in new
chr3_KI270934v1_alt	84457	109212	chr3_KI270934v1_alt:84457-109212	0	-	84457	84457	8553170	4	371,265,122,116,	0,19707,22565,24639,
#Deleted in new
chr3_KI270934v1_alt	84457	109208	chr3_KI270934v1_alt:84457-109208	0	-	84457	84457	8553170	4	371,121,265,112,	0,1378,19707,24639,
#Deleted in new
chr3_KI270934v1_alt	84493	104380	chr3_KI270934v1_alt:84493-104380	0	-	84493	84493	8553170	3	335,178,216,	0,9261,19671,
#Deleted in new
chr3_KI270934v1_alt	84591	93923	chr3_KI270934v1_alt:84591-93923	1	-	84591	84591	8553170	4	237,260,290,169,	0,5928,6701,9163,
#Deleted in new
chr3_KI270934v1_alt	84616	109129	chr3_KI270934v1_alt:84616-109129	0	-	84616	84616	8553170	3	212,265,33,	0,19548,24480,
#Deleted in new
chr3_KI270934v1_alt	84636	111346	chr3_KI270934v1_alt:84636-111346	1	-	84636	84636	8553170	7	192,100,265,118,122,114,51,	0,18887,19528,20006,22386,24460,26659,
#Deleted in new
chr3_KI270934v1_alt	84693	109212	chr3_KI270934v1_alt:84693-109212	0	-	84693	84693	8553170	5	135,100,265,115,116,	0,18830,19471,21550,24403,
#Deleted in new
chr3_KI270934v1_alt	84731	111346	chr3_KI270934v1_alt:84731-111346	0	-	84731	84731	8553170	6	97,100,265,122,114,51,	0,18792,19433,22291,24365,26564,
#Deleted in new
chr3_KI270934v1_alt	91340	94316	chr3_KI270934v1_alt:91340-94316	0	-	91340	91340	8553170	2	242,562,	0,2414,
#Deleted in new
chr3_KI270934v1_alt	91377	105141	chr3_KI270934v1_alt:91377-105141	1	-	91377	91377	8553170	6	205,178,229,100,265,499,	0,2377,4995,12146,12787,13265,
#Deleted in new
chr3_KI270934v1_alt	91447	106545	chr3_KI270934v1_alt:91447-106545	0	-	91447	91447	8553170	4	135,178,265,202,	0,2307,12717,14896,
#Deleted in new
chr3_KI270934v1_alt	91554	106659	chr3_KI270934v1_alt:91554-106659	1	-	91554	91554	8553170	6	28,178,229,265,112,45,	0,2200,4818,12610,14689,15060,
#Deleted in new
chr3_KI270934v1_alt	93647	103625	chr3_KI270934v1_alt:93647-103625	0	-	93647	93647	8553170	3	285,229,102,	0,2725,9876,
#Deleted in new
chr3_KI270934v1_alt	93791	105141	chr3_KI270934v1_alt:93791-105141	0	-	93791	93791	8553170	4	141,100,265,499,	0,9732,10373,10851,
#Deleted in new
chr3_KI270934v1_alt	93845	104536	chr3_KI270934v1_alt:93845-104536	0	-	93845	93845	8553170	5	87,229,63,100,372,	0,2527,9508,9678,10319,
#Deleted in new
chr3_KI270934v1_alt	96407	103537	chr3_KI270934v1_alt:96407-103537	0	-	96407	96407	8553170	2	194,184,	0,6946,
#Deleted in new
chr3_KI270934v1_alt	96420	104595	chr3_KI270934v1_alt:96420-104595	0	-	96420	96420	8553170	3	181,100,431,	0,7103,7744,
#Deleted in new
chr3_KI270934v1_alt	96437	111359	chr3_KI270934v1_alt:96437-111359	0	-	96437	96437	8553170	5	164,265,122,114,64,	0,7727,10585,12659,14858,
#Deleted in new
chr3_KI270934v1_alt	96482	104851	chr3_KI270934v1_alt:96482-104851	0	-	96482	96482	8553170	2	119,687,	0,7682,
#Deleted in new
chr3_KI270934v1_alt	96536	115178	chr3_KI270934v1_alt:96536-115178	0	-	96536	96536	8553170	7	65,100,265,114,131,112,65,	0,6987,7628,12560,14759,15124,18577,
#Deleted in new
chr3_KI270934v1_alt	103523	112070	chr3_KI270934v1_alt:103523-112070	0	-	103523	103523	8553170	6	100,265,114,131,112,70,	0,641,5573,7772,8137,8477,
#Deleted in new
chr3_KI270934v1_alt	104099	134897	chr3_KI270934v1_alt:104099-134897	0	-	104099	104099	789624	14	330,114,131,112,122,170,196,169,123,149,165,163,86,101,	0,4997,7196,7561,11014,14875,16183,17562,20221,22648,24612,26129,27021,30697,
#Deleted in new
chr3_KI270934v1_alt	104191	106750	chr3_KI270934v1_alt:104191-106750	1	-	104191	104191	8553170	4	238,122,187,136,	0,451,2152,2423,
#Deleted in new
chr3_KI270934v1_alt	104408	111093	chr3_KI270934v1_alt:104408-111093	0	-	104408	104408	8553170	3	21,114,349,	0,4688,6336,
#Deleted in new
chr3_KI270934v1_alt	106243	109185	chr3_KI270934v1_alt:106243-109185	0	-	106243	106243	8553170	4	112,92,122,89,	0,329,779,2853,
#Deleted in new
chr3_KI270934v1_alt	106590	110974	chr3_KI270934v1_alt:106590-110974	0	-	106590	106590	8553170	3	554,114,230,	0,2506,4154,
#Deleted in new
chr3_KI270934v1_alt	106614	111396	chr3_KI270934v1_alt:106614-111396	0	-	106614	106614	8553170	3	530,114,101,	0,2482,4681,
#Deleted in new
chr3_KI270934v1_alt	106621	109502	chr3_KI270934v1_alt:106621-109502	0	-	106621	106621	8553170	2	523,406,	0,2475,
#Deleted in new
chr3_KI270934v1_alt	106701	110591	chr3_KI270934v1_alt:106701-110591	0	-	106701	106701	8553170	3	443,114,51,	0,2395,3839,
#Deleted in new
chr3_KI270934v1_alt	106821	134885	chr3_KI270934v1_alt:106821-134885	1	-	106821	106821	8553170	14	2389,131,112,122,170,196,169,123,149,165,144,163,86,89,	0,4474,4839,8292,12153,13461,14840,17499,19926,21890,22373,23407,24299,27975,
#Deleted in new
chr3_KI270934v1_alt	107057	134866	chr3_KI270934v1_alt:107057-134866	7	-	107057	107057	16724991	15	87,114,131,112,122,170,196,169,123,149,165,144,163,86,70,	0,2039,4238,4603,8056,11917,13225,14604,17263,19690,21654,22137,23171,24063,27739,
#Deleted in new
chr3_KI270934v1_alt	110868	115207	chr3_KI270934v1_alt:110868-115207	0	-	110868	110868	8553170	3	558,112,94,	0,792,4245,
#Deleted in new
chr3_KI270934v1_alt	114894	120355	chr3_KI270934v1_alt:114894-120355	0	-	114894	114894	8553170	3	341,170,73,	0,4080,5388,
#Deleted in new
chr3_KI270934v1_alt	121170	134889	chr3_KI270934v1_alt:121170-134889	1	-	121170	121170	8553170	7	660,123,149,165,163,86,93,	0,3150,5577,7541,9058,9950,13626,
#Deleted in new
chr3_KI270934v1_alt	126279	134900	chr3_KI270934v1_alt:126279-134900	1	-	126279	126279	8553170	6	617,165,144,163,86,104,	0,2432,2915,3949,4841,8517,
#Deleted in new
chr3_KI270934v1_alt	128673	134869	chr3_KI270934v1_alt:128673-134869	0	-	128673	128673	8553170	4	203,163,86,73,	0,1555,2447,6123,
#Deleted in new
chr3_KI270934v1_alt	128852	134897	chr3_KI270934v1_alt:128852-134897	1	-	128852	128852	8553170	5	24,209,163,86,101,	0,277,1376,2268,5944,
#Deleted in new
chr3_KI270934v1_alt	135034	137397	chr3_KI270934v1_alt:135034-137397	3	+	135034	135034	8553170	3	623,90,971,	0,1197,1392,
#Deleted in new
chr3_KI270934v1_alt	141489	142816	chr3_KI270934v1_alt:141489-142816	7	+	141489	141489	16724991	2	748,322,	0,1005,
#Deleted in new
chr3_KI270934v1_alt	152501	152972	chr3_KI270934v1_alt:152501-152972	3	-	152501	152501	8553170	1	471,	0,
#Deleted in new
chr3_KI270935v1_alt	20642	21969	chr3_KI270935v1_alt:20642-21969	7	-	20642	20642	16724991	2	322,748,	0,579,
#Deleted in new
chr3_KI270935v1_alt	26061	28424	chr3_KI270935v1_alt:26061-28424	3	-	26061	26061	8553170	3	971,90,623,	0,1076,1740,
#Deleted in new
chr3_KI270935v1_alt	28558	37179	chr3_KI270935v1_alt:28558-37179	1	+	28558	28558	8553170	6	104,86,163,144,165,617,	0,3694,4509,5562,6024,8004,
#Deleted in new
chr3_KI270935v1_alt	28561	34606	chr3_KI270935v1_alt:28561-34606	1	+	28561	28561	8553170	5	101,86,163,209,24,	0,3691,4506,5559,6021,
#Deleted in new
chr3_KI270935v1_alt	28561	59359	chr3_KI270935v1_alt:28561-59359	0	+	28561	28561	789624	14	101,86,163,165,149,123,169,196,170,122,112,131,114,330,	0,3691,4506,6021,8001,10454,13067,14419,15753,19662,23125,23471,25687,30468,
#Deleted in new
chr3_KI270935v1_alt	28569	42288	chr3_KI270935v1_alt:28569-42288	1	+	28569	28569	8553170	7	93,86,163,165,149,123,660,	0,3683,4498,6013,7993,10446,13059,
#Deleted in new
chr3_KI270935v1_alt	28573	56637	chr3_KI270935v1_alt:28573-56637	1	+	28573	28573	8553170	14	89,86,163,144,165,149,123,169,196,170,122,112,131,2389,	0,3679,4494,5547,6009,7989,10442,13055,14407,15741,19650,23113,23459,25675,
#Deleted in new
chr3_KI270935v1_alt	28589	34785	chr3_KI270935v1_alt:28589-34785	0	+	28589	28589	8553170	4	73,86,163,203,	0,3663,4478,5993,
#Deleted in new
chr3_KI270935v1_alt	28592	56401	chr3_KI270935v1_alt:28592-56401	7	+	28592	28592	16724991	15	70,86,163,144,165,149,123,169,196,170,122,112,131,114,87,	0,3660,4475,5528,5990,7970,10423,13036,14388,15722,19631,23094,23440,25656,27722,
#Deleted in new
chr3_KI270935v1_alt	43103	48564	chr3_KI270935v1_alt:43103-48564	0	+	43103	43103	8553170	3	73,170,341,	0,1211,5120,
#Deleted in new
chr3_KI270935v1_alt	46174	82278	chr3_KI270935v1_alt:46174-82278	0	+	46174	46174	8553170	4	7,91,95,216,	0,32500,33069,35888,
#Deleted in new
chr3_KI270935v1_alt	46174	79673	chr3_KI270935v1_alt:46174-79673	0	+	46174	46174	8553170	3	7,115,430,	0,32476,33069,
#Deleted in new
chr3_KI270935v1_alt	46174	87142	chr3_KI270935v1_alt:46174-87142	0	+	46174	46174	8553170	4	7,91,95,258,	0,32500,33069,40710,
#Deleted in new
chr3_KI270935v1_alt	46174	87061	chr3_KI270935v1_alt:46174-87061	1	+	46174	46174	8553170	5	7,89,95,62,177,	0,32502,33069,39343,40710,
#Deleted in new
chr3_KI270935v1_alt	48251	52590	chr3_KI270935v1_alt:48251-52590	0	+	48251	48251	8553170	3	94,112,558,	0,3435,3781,
#Deleted in new
chr3_KI270935v1_alt	48280	66922	chr3_KI270935v1_alt:48280-66922	0	+	48280	48280	8553170	7	65,112,131,114,265,100,65,	0,3406,3752,5968,10749,11555,18577,
#Deleted in new
chr3_KI270935v1_alt	51388	59935	chr3_KI270935v1_alt:51388-59935	0	+	51388	51388	8553170	6	70,112,131,114,265,100,	0,298,644,2860,7641,8447,
#Deleted in new
chr3_KI270935v1_alt	51775	79304	chr3_KI270935v1_alt:51775-79304	1	+	51775	51775	8553170	8	23,131,114,229,178,290,135,61,	0,257,2473,15082,17751,20101,26855,27468,
#Deleted in new
chr3_KI270935v1_alt	52062	56844	chr3_KI270935v1_alt:52062-56844	0	+	52062	52062	8553170	3	101,114,530,	0,2186,4252,
#Deleted in new
chr3_KI270935v1_alt	52099	67021	chr3_KI270935v1_alt:52099-67021	0	+	52099	52099	8553170	5	64,114,122,265,164,	0,2149,4215,6930,14758,
#Deleted in new
chr3_KI270935v1_alt	52112	78822	chr3_KI270935v1_alt:52112-78822	1	+	52112	52112	8553170	7	51,114,122,118,265,100,192,	0,2136,4202,6586,6917,7723,26518,
#Deleted in new
chr3_KI270935v1_alt	52112	79303	chr3_KI270935v1_alt:52112-79303	0	+	52112	52112	8553170	4	51,114,265,60,	0,2136,6917,27131,
#Deleted in new
chr3_KI270935v1_alt	52112	78727	chr3_KI270935v1_alt:52112-78727	0	+	52112	52112	8553170	6	51,114,122,265,100,97,	0,2136,4202,6917,7723,26518,
#Deleted in new
chr3_KI270935v1_alt	52365	59050	chr3_KI270935v1_alt:52365-59050	0	+	52365	52365	8553170	3	349,114,21,	0,1883,6664,
#Deleted in new
chr3_KI270935v1_alt	52484	56868	chr3_KI270935v1_alt:52484-56868	0	+	52484	52484	8553170	3	230,114,554,	0,1764,3830,
#Deleted in new
chr3_KI270935v1_alt	52867	56757	chr3_KI270935v1_alt:52867-56757	0	+	52867	52867	8553170	3	51,114,443,	0,1381,3447,
#Deleted in new
chr3_KI270935v1_alt	53956	56837	chr3_KI270935v1_alt:53956-56837	0	+	53956	53956	8553170	2	406,523,	0,2358,
#Deleted in new
chr3_KI270935v1_alt	54246	78765	chr3_KI270935v1_alt:54246-78765	0	+	54246	54246	8553170	5	116,115,265,100,135,	0,2854,4783,5589,24384,
#Deleted in new
chr3_KI270935v1_alt	54246	79001	chr3_KI270935v1_alt:54246-79001	0	+	54246	54246	8553170	4	116,122,265,371,	0,2068,4783,24384,
#Deleted in new
chr3_KI270935v1_alt	54250	79001	chr3_KI270935v1_alt:54250-79001	0	+	54250	54250	8553170	4	112,265,121,371,	0,4779,23252,24380,
#Deleted in new
chr3_KI270935v1_alt	54269	79298	chr3_KI270935v1_alt:54269-79298	0	+	54269	54269	8553170	6	93,265,229,178,135,55,	0,4760,12588,15257,24361,24974,
#Deleted in new
chr3_KI270935v1_alt	54273	57215	chr3_KI270935v1_alt:54273-57215	0	+	54273	54273	8553170	4	89,122,92,112,	0,2041,2521,2830,
#Deleted in new
chr3_KI270935v1_alt	54329	78842	chr3_KI270935v1_alt:54329-78842	2	+	54329	54329	8553170	3	33,265,212,	0,4700,24301,
#Deleted in new
chr3_KI270935v1_alt	56317	79304	chr3_KI270935v1_alt:56317-79304	0	+	56317	56317	8553170	6	127,265,100,63,135,61,	0,2712,3518,3725,22313,22926,
#Deleted in new
chr3_KI270935v1_alt	56417	79333	chr3_KI270935v1_alt:56417-79333	1	+	56417	56417	8553170	5	19,92,118,265,90,	0,377,2281,2612,22826,
#Deleted in new
chr3_KI270935v1_alt	56708	59267	chr3_KI270935v1_alt:56708-59267	1	+	56708	56708	8553170	4	136,187,122,238,	0,220,1986,2321,
#Deleted in new
chr3_KI270935v1_alt	56799	71904	chr3_KI270935v1_alt:56799-71904	1	+	56799	56799	8553170	6	45,112,265,229,178,28,	0,304,2230,10058,12727,15077,
#Deleted in new
chr3_KI270935v1_alt	56811	79298	chr3_KI270935v1_alt:56811-79298	1	+	56811	56811	8553170	8	75,128,265,100,178,53,302,55,	0,1877,2218,3024,12715,15065,21819,22432,
#Deleted in new
chr3_KI270935v1_alt	56913	72011	chr3_KI270935v1_alt:56913-72011	0	+	56913	56913	8553170	4	202,265,178,135,	0,2116,12613,14963,
#Deleted in new
chr3_KI270935v1_alt	58317	72081	chr3_KI270935v1_alt:58317-72081	1	+	58317	58317	8553170	6	499,265,100,229,178,205,	0,712,1518,8540,11209,13559,
#Deleted in new
chr3_KI270935v1_alt	58317	69667	chr3_KI270935v1_alt:58317-69667	0	+	58317	58317	8553170	4	499,265,100,141,	0,712,1518,11209,
#Deleted in new
chr3_KI270935v1_alt	58607	66976	chr3_KI270935v1_alt:58607-66976	0	+	58607	58607	8553170	2	687,119,	0,8250,
#Deleted in new
chr3_KI270935v1_alt	58863	67038	chr3_KI270935v1_alt:58863-67038	0	+	58863	58863	8553170	3	431,100,181,	0,972,7994,
#Deleted in new
chr3_KI270935v1_alt	58880	82186	chr3_KI270935v1_alt:58880-82186	0	+	58880	58880	789624	5	414,100,135,95,124,	0,955,19750,20363,23182,
#Deleted in new
chr3_KI270935v1_alt	58922	69613	chr3_KI270935v1_alt:58922-69613	0	+	58922	58922	8553170	5	372,100,63,229,87,	0,913,1120,7935,10604,
#Deleted in new
chr3_KI270935v1_alt	59017	79304	chr3_KI270935v1_alt:59017-79304	0	+	59017	59017	8553170	5	277,100,178,302,61,	0,818,10509,19613,20226,
#Deleted in new
chr3_KI270935v1_alt	59044	79304	chr3_KI270935v1_alt:59044-79304	0	+	59044	59044	8553170	5	250,110,290,135,61,	0,10550,12832,19586,20199,
#Deleted in new
chr3_KI270935v1_alt	59078	78965	chr3_KI270935v1_alt:59078-78965	0	+	59078	59078	8553170	3	216,178,335,	0,10448,19552,
#Deleted in new
chr3_KI270935v1_alt	59143	82167	chr3_KI270935v1_alt:59143-82167	0	+	59143	59143	8553170	4	151,135,95,105,	0,19487,20100,22919,
#Deleted in new
chr3_KI270935v1_alt	59147	79274	chr3_KI270935v1_alt:59147-79274	1	+	59147	59147	8553170	4	147,100,63,644,	0,688,895,19483,
#Deleted in new
chr3_KI270935v1_alt	59166	79304	chr3_KI270935v1_alt:59166-79304	0	+	59166	59166	8553170	4	128,178,302,61,	0,10360,19464,20077,
#Deleted in new
chr3_KI270935v1_alt	59178	79304	chr3_KI270935v1_alt:59178-79304	0	+	59178	59178	8553170	5	116,100,178,116,674,	0,657,10348,12698,19452,
#Deleted in new
chr3_KI270935v1_alt	59252	79303	chr3_KI270935v1_alt:59252-79303	1	+	59252	59252	8553170	6	42,100,229,149,302,60,	0,583,7605,10274,19378,19991,
#Deleted in new
chr3_KI270935v1_alt	59254	79304	chr3_KI270935v1_alt:59254-79304	1	+	59254	59254	8553170	6	40,178,116,82,254,61,	0,10272,12622,12830,19376,19989,
#Deleted in new
chr3_KI270935v1_alt	59276	79304	chr3_KI270935v1_alt:59276-79304	0	+	59276	59276	8553170	6	18,100,229,178,116,61,	0,559,7581,10250,12600,19967,
#Deleted in new
chr3_KI270935v1_alt	59833	69811	chr3_KI270935v1_alt:59833-69811	0	+	59833	59833	8553170	3	102,229,285,	0,7024,9693,
#Deleted in new
chr3_KI270935v1_alt	59847	79304	chr3_KI270935v1_alt:59847-79304	0	+	59847	59847	8553170	6	88,229,178,53,302,61,	0,7010,9679,12029,18783,19396,
#Deleted in new
chr3_KI270935v1_alt	59871	82372	chr3_KI270935v1_alt:59871-82372	0	+	59871	59871	8553170	4	64,135,95,310,	0,18759,19372,22191,
#Deleted in new
chr3_KI270935v1_alt	59874	79304	chr3_KI270935v1_alt:59874-79304	0	+	59874	59874	8553170	5	61,63,135,85,61,	0,168,18756,19051,19369,
#Deleted in new
chr3_KI270935v1_alt	59894	79304	chr3_KI270935v1_alt:59894-79304	1	+	59894	59894	8553170	4	41,178,121,674,	0,9632,17608,18736,
#Deleted in new
chr3_KI270935v1_alt	59910	79199	chr3_KI270935v1_alt:59910-79199	0	+	59910	59910	8553170	3	25,178,569,	0,9616,18720,
#Deleted in new
chr3_KI270935v1_alt	59921	67051	chr3_KI270935v1_alt:59921-67051	0	+	59921	59921	8553170	2	184,194,	0,6936,
#Deleted in new
chr3_KI270935v1_alt	63846	79304	chr3_KI270935v1_alt:63846-79304	0	+	63846	63846	8553170	3	146,135,61,	0,14784,15397,
#Deleted in new
chr3_KI270935v1_alt	66933	79001	chr3_KI270935v1_alt:66933-79001	0	+	66933	66933	8553170	3	153,178,371,	0,2593,11697,
#Deleted in new
chr3_KI270935v1_alt	66998	79306	chr3_KI270935v1_alt:66998-79306	0	+	66998	66998	8553170	6	88,178,290,135,85,63,	0,2528,4878,11632,11927,12245,
#Deleted in new
chr3_KI270935v1_alt	69142	72118	chr3_KI270935v1_alt:69142-72118	0	+	69142	69142	8553170	2	562,242,	0,2734,
#Deleted in new
chr3_KI270935v1_alt	69159	79304	chr3_KI270935v1_alt:69159-79304	0	+	69159	69159	8553170	2	545,61,	0,10084,
#Deleted in new
chr3_KI270935v1_alt	69535	78867	chr3_KI270935v1_alt:69535-78867	1	+	69535	69535	8553170	4	169,290,260,237,	0,2341,3144,9095,
#Deleted in new
chr3_KI270935v1_alt	69579	79271	chr3_KI270935v1_alt:69579-79271	0	+	69579	69579	8553170	4	125,290,302,28,	0,2297,9051,9664,
#Deleted in new
chr3_KI270935v1_alt	69644	82178	chr3_KI270935v1_alt:69644-82178	0	+	69644	69644	8553170	4	60,254,95,116,	0,8986,9599,12418,
#Deleted in new
chr3_KI270935v1_alt	70817	82372	chr3_KI270935v1_alt:70817-82372	1	+	70817	70817	8553170	3	1349,704,310,	0,7817,11245,
#Deleted in new
chr3_KI270935v1_alt	71619	79257	chr3_KI270935v1_alt:71619-79257	0	+	71619	71619	8553170	3	547,302,14,	0,7011,7624,
#Deleted in new
chr3_KI270935v1_alt	71935	79304	chr3_KI270935v1_alt:71935-79304	0	+	71935	71935	8553170	4	231,98,302,61,	0,5590,6695,7308,
#Deleted in new
chr3_KI270935v1_alt	72053	95234	chr3_KI270935v1_alt:72053-95234	0	+	72053	72053	8553170	5	113,302,95,170,58,	0,6577,7190,16470,23123,
#Deleted in new
chr3_KI270935v1_alt	72135	93239	chr3_KI270935v1_alt:72135-93239	0	+	72135	72135	8553170	4	31,135,95,242,	0,6495,7108,20862,
#Deleted in new
chr3_KI270935v1_alt	76157	79301	chr3_KI270935v1_alt:76157-79301	0	+	76157	76157	8553170	2	75,671,	0,2473,
#Deleted in new
chr3_KI270935v1_alt	76634	79304	chr3_KI270935v1_alt:76634-79304	0	+	76634	76634	8553170	2	174,674,	0,1996,
#Deleted in new
chr3_KI270935v1_alt	77191	79304	chr3_KI270935v1_alt:77191-79304	0	+	77191	77191	8553170	3	432,302,61,	0,1439,2052,
#Deleted in new
chr3_KI270935v1_alt	78627	82372	chr3_KI270935v1_alt:78627-82372	0	+	78627	78627	8553170	3	138,95,310,	0,616,3435,
#Deleted in new
chr3_KI270935v1_alt	78630	82178	chr3_KI270935v1_alt:78630-82178	0	+	78630	78630	8553170	4	135,85,95,116,	0,295,613,3432,
#Deleted in new
chr3_KI270935v1_alt	78643	82372	chr3_KI270935v1_alt:78643-82372	0	+	78643	78643	8553170	3	289,95,310,	0,600,3419,
#Deleted in new
chr3_KI270935v1_alt	78650	103809	chr3_KI270935v1_alt:78650-103809	0	+	78650	78650	8553170	4	115,85,95,163,	0,275,593,24996,
#Deleted in new
chr3_KI270935v1_alt	78650	87170	chr3_KI270935v1_alt:78650-87170	0	+	78650	78650	8553170	3	234,95,286,	0,593,8234,
#Deleted in new
chr3_KI270935v1_alt	78650	103875	chr3_KI270935v1_alt:78650-103875	1	+	78650	78650	8553170	5	115,95,209,92,229,	0,593,21189,21494,24996,
#Deleted in new
chr3_KI270935v1_alt	78650	103757	chr3_KI270935v1_alt:78650-103757	0	+	78650	78650	8553170	5	234,95,170,92,111,	0,593,9873,21494,24996,
#Deleted in new
chr3_KI270935v1_alt	78650	95297	chr3_KI270935v1_alt:78650-95297	0	+	78650	78650	8553170	4	115,95,318,121,	0,593,14347,16526,
#Deleted in new
chr3_KI270935v1_alt	78650	87467	chr3_KI270935v1_alt:78650-87467	0	+	78650	78650	8553170	3	115,95,583,	0,593,8234,
#Deleted in new
chr3_KI270935v1_alt	78650	94798	chr3_KI270935v1_alt:78650-94798	0	+	78650	78650	8553170	4	282,95,318,55,	0,593,14347,16093,
#Deleted in new
chr3_KI270935v1_alt	78650	88236	chr3_KI270935v1_alt:78650-88236	0	+	78650	78650	8553170	4	115,85,95,228,	0,275,593,9358,
#Deleted in new
chr3_KI270935v1_alt	78650	88229	chr3_KI270935v1_alt:78650-88229	0	+	78650	78650	8553170	3	282,95,221,	0,593,9358,
#Deleted in new
chr3_KI270935v1_alt	78650	87167	chr3_KI270935v1_alt:78650-87167	0	+	78650	78650	8553170	3	115,95,398,	0,593,8119,
#Deleted in new
chr3_KI270935v1_alt	78650	80060	chr3_KI270935v1_alt:78650-80060	0	+	78650	78650	8553170	2	115,817,	0,593,
#Deleted in new
chr3_KI270935v1_alt	78650	82269	chr3_KI270935v1_alt:78650-82269	0	+	78650	78650	8553170	4	115,127,95,207,	0,275,593,3412,
#Deleted in new
chr3_KI270935v1_alt	78650	88152	chr3_KI270935v1_alt:78650-88152	0	+	78650	78650	8553170	3	360,95,144,	0,593,9358,
#Deleted in new
chr3_KI270935v1_alt	78650	95527	chr3_KI270935v1_alt:78650-95527	0	+	78650	78650	8553170	3	282,95,351,	0,593,16526,
#Deleted in new
chr3_KI270935v1_alt	78650	87171	chr3_KI270935v1_alt:78650-87171	0	+	78650	78650	8553170	4	115,85,95,287,	0,275,593,8234,
#Deleted in new
chr3_KI270935v1_alt	78650	79883	chr3_KI270935v1_alt:78650-79883	0	+	78650	78650	8553170	2	234,640,	0,593,
#Deleted in new
chr3_KI270935v1_alt	78650	88506	chr3_KI270935v1_alt:78650-88506	0	+	78650	78650	8553170	3	282,95,96,	0,593,9760,
#Deleted in new
chr3_KI270935v1_alt	78650	82620	chr3_KI270935v1_alt:78650-82620	0	+	78650	78650	8553170	2	688,26,	0,3944,
#Deleted in new
chr3_KI270935v1_alt	78650	103843	chr3_KI270935v1_alt:78650-103843	0	+	78650	78650	8553170	4	282,95,92,197,	0,593,21494,24996,
#Deleted in new
chr3_KI270935v1_alt	78650	95684	chr3_KI270935v1_alt:78650-95684	0	+	78650	78650	8553170	3	115,95,508,	0,593,16526,
#Deleted in new
chr3_KI270935v1_alt	78650	103741	chr3_KI270935v1_alt:78650-103741	0	+	78650	78650	8553170	4	282,95,283,95,	0,593,9760,24996,
#Deleted in new
chr3_KI270935v1_alt	78650	104048	chr3_KI270935v1_alt:78650-104048	0	+	78650	78650	8553170	4	115,95,92,402,	0,593,21494,24996,
#Deleted in new
chr3_KI270935v1_alt	78650	93209	chr3_KI270935v1_alt:78650-93209	0	+	78650	78650	8553170	4	115,95,170,212,	0,593,9873,14347,
#Deleted in new
chr3_KI270935v1_alt	78650	82236	chr3_KI270935v1_alt:78650-82236	0	+	78650	78650	8553170	3	234,95,174,	0,593,3412,
#Deleted in new
chr3_KI270935v1_alt	78650	95264	chr3_KI270935v1_alt:78650-95264	0	+	78650	78650	8553170	4	282,95,318,88,	0,593,14347,16526,
#Deleted in new
chr3_KI270935v1_alt	78650	87086	chr3_KI270935v1_alt:78650-87086	0	+	78650	78650	8553170	3	282,95,202,	0,593,8234,
#Deleted in new
chr3_KI270935v1_alt	78650	87308	chr3_KI270935v1_alt:78650-87308	1	+	78650	78650	8553170	3	688,53,54,	0,8234,8604,
#Deleted in new
chr3_KI270935v1_alt	78650	82266	chr3_KI270935v1_alt:78650-82266	0	+	78650	78650	8553170	3	360,95,204,	0,593,3412,
#Deleted in new
chr3_KI270935v1_alt	78650	104048	chr3_KI270935v1_alt:78650-104048	0	+	78650	78650	8553170	2	688,402,	0,24996,
#Deleted in new
chr3_KI270935v1_alt	78650	88275	chr3_KI270935v1_alt:78650-88275	0	+	78650	78650	8553170	2	688,267,	0,9358,
#Deleted in new
chr3_KI270935v1_alt	78650	100032	chr3_KI270935v1_alt:78650-100032	0	+	78650	78650	8553170	3	282,95,193,	0,593,21189,
#Deleted in new
chr3_KI270935v1_alt	78650	79716	chr3_KI270935v1_alt:78650-79716	0	+	78650	78650	8553170	3	115,85,473,	0,275,593,
#Deleted in new
chr3_KI270935v1_alt	78650	80084	chr3_KI270935v1_alt:78650-80084	1	+	78650	78650	8553170	2	282,841,	0,593,
#Deleted in new
chr3_KI270935v1_alt	78650	88243	chr3_KI270935v1_alt:78650-88243	0	+	78650	78650	8553170	2	688,176,	0,9417,
#Deleted in new
chr3_KI270935v1_alt	78651	95315	chr3_KI270935v1_alt:78651-95315	0	+	78651	78651	8553170	4	114,95,173,139,	0,592,9869,16525,
#Deleted in new
chr3_KI270935v1_alt	78654	93145	chr3_KI270935v1_alt:78654-93145	1	+	78654	78654	8553170	5	111,85,95,173,148,	0,271,589,9866,14343,
#Deleted in new
chr3_KI270935v1_alt	78658	95519	chr3_KI270935v1_alt:78658-95519	1	+	78658	78658	8553170	4	107,95,153,343,	0,585,9882,16518,
#Deleted in new
chr3_KI270935v1_alt	78674	88274	chr3_KI270935v1_alt:78674-88274	0	+	78674	78674	8553170	3	91,95,207,	0,569,9393,
#Deleted in new
chr3_KI270935v1_alt	78674	92536	chr3_KI270935v1_alt:78674-92536	0	+	78674	78674	8553170	3	91,95,325,	0,569,13537,
#Deleted in new
chr3_KI270935v1_alt	78674	95373	chr3_KI270935v1_alt:78674-95373	0	+	78674	78674	8553170	4	91,85,95,197,	0,251,569,16502,
#Deleted in new
chr3_KI270935v1_alt	78674	95552	chr3_KI270935v1_alt:78674-95552	1	+	78674	78674	8553170	4	210,95,170,376,	0,569,9849,16502,
#Deleted in new
chr3_KI270935v1_alt	78674	88277	chr3_KI270935v1_alt:78674-88277	0	+	78674	78674	8553170	3	91,95,269,	0,569,9334,
#Deleted in new
chr3_KI270935v1_alt	78674	87143	chr3_KI270935v1_alt:78674-87143	0	+	78674	78674	8553170	4	91,95,62,259,	0,569,6843,8210,
#Deleted in new
chr3_KI270935v1_alt	78674	82372	chr3_KI270935v1_alt:78674-82372	0	+	78674	78674	8553170	3	91,85,287,	0,251,3411,
#Deleted in new
chr3_KI270935v1_alt	78674	87121	chr3_KI270935v1_alt:78674-87121	0	+	78674	78674	8553170	4	258,95,62,237,	0,569,6843,8210,
#Deleted in new
chr3_KI270935v1_alt	78674	89384	chr3_KI270935v1_alt:78674-89384	0	+	78674	78674	8553170	4	91,95,173,285,	0,569,9846,10425,
#Deleted in new
chr3_KI270935v1_alt	78674	89507	chr3_KI270935v1_alt:78674-89507	0	+	78674	78674	8553170	2	664,408,	0,10425,
#Deleted in new
chr3_KI270935v1_alt	78674	88222	chr3_KI270935v1_alt:78674-88222	0	+	78674	78674	8553170	3	210,95,214,	0,569,9334,
#Deleted in new
chr3_KI270935v1_alt	78674	103693	chr3_KI270935v1_alt:78674-103693	1	+	78674	78674	8553170	5	258,95,283,92,47,	0,569,9736,21470,24972,
#Deleted in new
chr3_KI270935v1_alt	78674	89172	chr3_KI270935v1_alt:78674-89172	0	+	78674	78674	8553170	4	91,95,283,73,	0,569,9736,10425,
#Deleted in new
chr3_KI270935v1_alt	78674	82290	chr3_KI270935v1_alt:78674-82290	1	+	78674	78674	8553170	3	91,413,228,	0,251,3388,
#Deleted in new
chr3_KI270935v1_alt	78674	88616	chr3_KI270935v1_alt:78674-88616	0	+	78674	78674	8553170	3	210,95,206,	0,569,9736,
#Deleted in new
chr3_KI270935v1_alt	78674	79769	chr3_KI270935v1_alt:78674-79769	0	+	78674	78674	8553170	3	258,95,289,	0,569,806,
#Deleted in new
chr3_KI270935v1_alt	78679	110461	chr3_KI270935v1_alt:78679-110461	0	+	78679	78679	8553170	3	253,95,118,	0,564,31664,
#Deleted in new
chr3_KI270935v1_alt	78681	103852	chr3_KI270935v1_alt:78681-103852	0	+	78681	78681	8553170	4	84,95,283,206,	0,562,9729,24965,
#Deleted in new
chr3_KI270935v1_alt	78702	88693	chr3_KI270935v1_alt:78702-88693	0	+	78702	78702	8553170	3	182,95,283,	0,541,9708,
#Deleted in new
chr3_KI270935v1_alt	78738	95250	chr3_KI270935v1_alt:78738-95250	1	+	78738	78738	8553170	3	600,318,74,	0,14259,16438,
#Deleted in new
chr3_KI270935v1_alt	78746	104046	chr3_KI270935v1_alt:78746-104046	0	+	78746	78746	8553170	3	138,95,400,	0,497,24900,
#Deleted in new
chr3_KI270935v1_alt	78782	105561	chr3_KI270935v1_alt:78782-105561	0	+	78782	78782	8553170	3	150,95,309,	0,461,26470,
#Deleted in new
chr3_KI270935v1_alt	78784	87169	chr3_KI270935v1_alt:78784-87169	0	+	78784	78784	8553170	2	554,285,	0,8100,
#Deleted in new
chr3_KI270935v1_alt	78976	95578	chr3_KI270935v1_alt:78976-95578	0	+	78976	78976	8553170	2	362,402,	0,16200,
#Deleted in new
chr3_KI270935v1_alt	79079	104003	chr3_KI270935v1_alt:79079-104003	0	+	79079	79079	8553170	3	259,92,357,	0,21065,24567,
#Deleted in new
chr3_KI270935v1_alt	79153	94881	chr3_KI270935v1_alt:79153-94881	0	+	79153	79153	8553170	3	185,173,138,	0,9367,15590,
#Deleted in new
chr3_KI270935v1_alt	79222	105273	chr3_KI270935v1_alt:79222-105273	0	+	79222	79222	8553170	3	116,92,21,	0,20922,26030,
#Deleted in new
chr3_KI270935v1_alt	91378	104048	chr3_KI270935v1_alt:91378-104048	1	+	91504	103715	789624	4	202,1893,92,402,	0,3798,8766,12268,
#Deleted in new
chr3_KI270935v1_alt	91380	105530	chr3_KI270935v1_alt:91380-105530	1	+	91504	105363	789624	4	200,1893,92,278,	0,3796,8764,13872,
#Deleted in new
chr3_KI270935v1_alt	91447	95314	chr3_KI270935v1_alt:91447-95314	0	+	91447	91447	8553170	3	133,318,138,	0,1550,3729,
#Deleted in new
chr3_KI270935v1_alt	91471	95591	chr3_KI270935v1_alt:91471-95591	2	+	91471	91471	8553170	2	109,470,	0,3650,
#Deleted in new
chr3_KI270935v1_alt	94723	104047	chr3_KI270935v1_alt:94723-104047	1	+	95205	103715	789624	4	933,900,92,401,	0,1446,5421,8923,
#Deleted in new
chr3_KI270935v1_alt	94723	104050	chr3_KI270935v1_alt:94723-104050	1	+	95205	103715	789624	3	2346,92,404,	0,5421,8923,
#Deleted in new
chr3_KI270935v1_alt	96677	100619	chr3_KI270935v1_alt:96677-100619	0	+	96677	96677	8553170	2	392,475,	0,3467,
#Deleted in new
chr3_KI270935v1_alt	96866	111620	chr3_KI270935v1_alt:96866-111620	0	+	96866	111484	789624	4	203,92,84,142,	0,3278,13477,14612,
#Deleted in new
chr3_KI270935v1_alt	117672	181676	chr3_KI270935v1_alt:117672-181676	7	-	117672	117672	16724991	25	205,163,224,65,74,180,160,182,138,234,102,168,91,209,120,126,180,89,131,156,165,134,153,12695,82,	0,1726,3713,4031,5197,5875,7037,9971,11948,13708,14308,14911,15679,16257,16869,17821,18094,19487,21614,22808,24884,27400,30408,30979,63922,
#Deleted in new
chr3_KI270936v1_alt	3234	47563	chr3_KI270936v1_alt:3234-47563	1	+	3234	47560	789624	25	2884,84,153,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,208,	0,12628,13046,17196,19685,21130,22349,24750,26052,26379,27337,27860,28556,29247,29916,30384,32240,34173,37129,38271,39055,40230,40389,42437,44121,
#Deleted in new
chr3_KI270936v1_alt	3234	35611	chr3_KI270936v1_alt:3234-35611	1	+	3234	35611	789624	16	12712,153,134,165,156,131,89,180,126,120,209,91,168,102,234,137,	0,13046,17196,19685,21130,22349,24750,26052,26379,27337,27860,28556,29247,29916,30384,32240,
#Deleted in new
chr3_KI270936v1_alt	3238	47678	chr3_KI270936v1_alt:3238-47678	0	+	3238	28016	789624	23	12708,153,134,89,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19757,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270936v1_alt	3238	47969	chr3_KI270936v1_alt:3238-47969	0	+	3238	41550	789624	23	12708,153,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,180,74,65,224,163,614,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270936v1_alt	3238	47678	chr3_KI270936v1_alt:3238-47678	0	+	3238	28050	789624	23	12708,153,134,89,103,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19757,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270936v1_alt	3238	47678	chr3_KI270936v1_alt:3238-47678	0	+	3238	28016	789624	24	12708,153,134,165,156,103,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270936v1_alt	3238	47678	chr3_KI270936v1_alt:3238-47678	0	+	3238	47560	789624	23	12708,153,134,165,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19681,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270936v1_alt	3238	47678	chr3_KI270936v1_alt:3238-47678	0	+	3238	24401	789624	22	12708,167,134,165,156,131,89,180,126,120,209,91,168,102,234,138,154,74,65,224,163,323,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,38293,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270936v1_alt	3238	47969	chr3_KI270936v1_alt:3238-47969	0	+	3238	47560	789624	24	12708,153,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,614,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270936v1_alt	3238	47678	chr3_KI270936v1_alt:3238-47678	0	+	3238	24401	789624	24	12708,167,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270936v1_alt	3238	47678	chr3_KI270936v1_alt:3238-47678	0	+	3238	24401	789624	24	12708,153,134,89,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19757,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270936v1_alt	3238	47969	chr3_KI270936v1_alt:3238-47969	0	+	3238	47560	789624	24	12708,153,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,614,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270936v1_alt	3238	47678	chr3_KI270936v1_alt:3238-47678	0	+	3238	28016	789624	23	12708,153,134,165,103,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19681,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270936v1_alt	9381	11241	chr3_KI270936v1_alt:9381-11241	1	+	9381	11241	789624	2	568,1244,	0,616,
#Deleted in new
chr3_KI270936v1_alt	15925	47969	chr3_KI270936v1_alt:15925-47969	0	+	15925	24401	789624	23	21,153,134,89,156,131,89,180,126,120,209,91,168,102,234,138,182,180,74,65,224,163,614,	0,355,4505,7070,8439,9658,12059,13361,13688,14646,15169,15865,16556,17225,17693,19549,21482,25580,26364,27539,27698,29746,31430,
#Deleted in new
chr3_KI270936v1_alt	15925	47969	chr3_KI270936v1_alt:15925-47969	0	+	15925	24401	789624	23	21,167,134,165,156,131,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,614,	0,355,4505,6994,8439,9658,13361,13688,14646,15169,15865,16556,17225,17693,19549,21482,24438,25580,26364,27539,27698,29746,31430,
#Deleted in new
chr3_KI270936v1_alt	15925	47969	chr3_KI270936v1_alt:15925-47969	0	+	15925	24401	789624	23	21,153,134,89,156,131,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,614,	0,355,4505,7070,8439,9658,13361,13688,14646,15169,15865,16556,17225,17693,19549,21482,24438,25580,26364,27539,27698,29746,31430,
#Deleted in new
chr3_KI270936v1_alt	15925	47969	chr3_KI270936v1_alt:15925-47969	0	+	15925	23856	789624	24	21,167,134,165,209,156,131,89,180,126,120,209,91,168,102,234,138,182,180,74,65,224,163,614,	0,355,4505,6994,7924,8439,9658,12059,13361,13688,14646,15169,15865,16556,17225,17693,19549,21482,25580,26364,27539,27698,29746,31430,
#Deleted in new
chr3_KI270936v1_alt	15925	47969	chr3_KI270936v1_alt:15925-47969	0	+	15925	24401	789624	24	21,153,134,89,156,103,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,614,	0,355,4505,7070,8439,9658,12059,13361,13688,14646,15169,15865,16556,17225,17693,19549,21482,24438,25580,26364,27539,27698,29746,31430,
#Deleted in new
chr3_KI270936v1_alt	20430	47969	chr3_KI270936v1_alt:20430-47969	2	+	20430	47560	789624	22	134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,614,	0,2489,3934,5153,7554,8856,9183,10141,10664,11360,12051,12720,13188,15044,16977,19933,21075,21859,23034,23193,25241,26925,
#Deleted in new
chr3_KI270936v1_alt	25047	28074	chr3_KI270936v1_alt:25047-28074	0	+	25047	25047	8553170	3	332,131,90,	0,536,2937,
#Deleted in new
chr3_KI270936v1_alt	40741	47563	chr3_KI270936v1_alt:40741-47563	0	+	40741	40741	8553170	6	944,74,65,224,163,208,	0,1548,2723,2882,4930,6614,
#Deleted in new
chr3_KI270936v1_alt	41632	44129	chr3_KI270936v1_alt:41632-44129	0	+	41632	41632	8553170	4	53,74,65,506,	0,657,1832,1991,
#Deleted in new
chr3_KI270936v1_alt	42215	44880	chr3_KI270936v1_alt:42215-44880	0	+	42215	42215	8553170	2	1314,1257,	0,1408,
#Deleted in new
chr3_KI270936v1_alt	53611	68339	chr3_KI270936v1_alt:53611-68339	0	-	53747	68339	789624	4	142,84,92,203,	0,1193,11357,14525,
#Deleted in new
chr3_KI270936v1_alt	54770	85491	chr3_KI270936v1_alt:54770-85491	0	-	54770	54770	8553170	3	118,95,253,	0,30062,30468,
#Deleted in new
chr3_KI270936v1_alt	59680	85388	chr3_KI270936v1_alt:59680-85388	0	-	59680	59680	8553170	3	309,95,150,	0,25152,25558,
#Deleted in new
chr3_KI270936v1_alt	59711	73311	chr3_KI270936v1_alt:59711-73311	3	-	59878	73190	789624	4	278,92,1374,194,	0,5257,8425,13406,
#Deleted in new
chr3_KI270936v1_alt	59968	84948	chr3_KI270936v1_alt:59968-84948	0	-	59968	59968	8553170	3	21,92,116,	0,5000,24864,
#Deleted in new
chr3_KI270936v1_alt	61189	69962	chr3_KI270936v1_alt:61189-69962	1	-	61524	69481	789624	3	404,92,1826,	0,3779,6947,
#Deleted in new
chr3_KI270936v1_alt	61191	85520	chr3_KI270936v1_alt:61191-85520	0	-	61191	61191	8553170	4	402,92,95,115,	0,3777,23641,24214,
#Deleted in new
chr3_KI270936v1_alt	61191	73313	chr3_KI270936v1_alt:61191-73313	1	-	61524	73190	789624	4	402,92,1374,196,	0,3777,6945,11926,
#Deleted in new
chr3_KI270936v1_alt	61191	85520	chr3_KI270936v1_alt:61191-85520	2	-	61191	61191	8553170	2	402,688,	0,23641,
#Deleted in new
chr3_KI270936v1_alt	61193	85424	chr3_KI270936v1_alt:61193-85424	0	-	61193	61193	8553170	3	400,95,138,	0,23639,24093,
#Deleted in new
chr3_KI270936v1_alt	61236	85091	chr3_KI270936v1_alt:61236-85091	0	-	61236	61236	8553170	3	357,92,259,	0,3732,23596,
#Deleted in new
chr3_KI270936v1_alt	61364	85520	chr3_KI270936v1_alt:61364-85520	1	-	61364	61364	8553170	5	229,92,209,95,115,	0,3604,3792,23468,24041,
#Deleted in new
chr3_KI270936v1_alt	61387	85489	chr3_KI270936v1_alt:61387-85489	0	-	61387	61387	8553170	4	206,283,95,84,	0,14609,23445,24018,
#Deleted in new
chr3_KI270936v1_alt	61396	85520	chr3_KI270936v1_alt:61396-85520	0	-	61396	61396	8553170	4	197,92,95,282,	0,3572,23436,23842,
#Deleted in new
chr3_KI270936v1_alt	61430	85520	chr3_KI270936v1_alt:61430-85520	0	-	61430	61430	8553170	4	163,95,85,115,	0,23402,23730,23975,
#Deleted in new
chr3_KI270936v1_alt	61482	85520	chr3_KI270936v1_alt:61482-85520	0	-	61482	61482	8553170	5	111,92,170,95,234,	0,3486,14514,23350,23804,
#Deleted in new
chr3_KI270936v1_alt	61498	85520	chr3_KI270936v1_alt:61498-85520	0	-	61498	61498	8553170	4	95,283,95,282,	0,14498,23334,23740,
#Deleted in new
chr3_KI270936v1_alt	61546	85496	chr3_KI270936v1_alt:61546-85496	1	-	61546	61546	8553170	5	47,92,283,95,258,	0,3422,14450,23286,23692,
#Deleted in new
chr3_KI270936v1_alt	64585	68528	chr3_KI270936v1_alt:64585-68528	0	-	64585	64585	8553170	2	475,392,	0,3551,
#Deleted in new
chr3_KI270936v1_alt	65172	85520	chr3_KI270936v1_alt:65172-85520	0	-	65172	65172	8553170	3	193,95,282,	0,19660,20066,
#Deleted in new
chr3_KI270936v1_alt	69002	85520	chr3_KI270936v1_alt:69002-85520	0	-	69002	69002	8553170	3	508,95,115,	0,15830,16403,
#Deleted in new
chr3_KI270936v1_alt	69095	73223	chr3_KI270936v1_alt:69095-73223	0	-	69095	69095	8553170	2	470,106,	0,4022,
#Deleted in new
chr3_KI270936v1_alt	69108	85194	chr3_KI270936v1_alt:69108-85194	0	-	69108	69108	8553170	2	402,362,	0,15724,
#Deleted in new
chr3_KI270936v1_alt	69134	85496	chr3_KI270936v1_alt:69134-85496	1	-	69134	69134	8553170	4	376,170,95,210,	0,6862,15698,16152,
#Deleted in new
chr3_KI270936v1_alt	69159	85520	chr3_KI270936v1_alt:69159-85520	0	-	69159	69159	8553170	3	351,95,282,	0,15673,16079,
#Deleted in new
chr3_KI270936v1_alt	69167	85512	chr3_KI270936v1_alt:69167-85512	1	-	69167	69167	8553170	4	343,153,95,107,	0,6829,15665,16238,
#Deleted in new
chr3_KI270936v1_alt	69313	85496	chr3_KI270936v1_alt:69313-85496	0	-	69313	69313	8553170	4	197,95,85,91,	0,15519,15847,16092,
#Deleted in new
chr3_KI270936v1_alt	69371	85519	chr3_KI270936v1_alt:69371-85519	0	-	69371	69371	8553170	4	139,173,95,114,	0,6625,15461,16034,
#Deleted in new
chr3_KI270936v1_alt	69372	73247	chr3_KI270936v1_alt:69372-73247	0	-	69372	69372	8553170	3	138,316,130,	0,2001,3745,
#Deleted in new
chr3_KI270936v1_alt	69389	85520	chr3_KI270936v1_alt:69389-85520	0	-	69389	69389	8553170	4	121,316,95,115,	0,1984,15443,16016,
#Deleted in new
chr3_KI270936v1_alt	69422	85520	chr3_KI270936v1_alt:69422-85520	0	-	69422	69422	8553170	4	88,316,95,282,	0,1951,15410,15816,
#Deleted in new
chr3_KI270936v1_alt	69436	85432	chr3_KI270936v1_alt:69436-85432	1	-	69436	69436	8553170	3	74,316,600,	0,1937,15396,
#Deleted in new
chr3_KI270936v1_alt	69452	92117	chr3_KI270936v1_alt:69452-92117	0	-	69452	69452	8553170	5	58,170,95,302,113,	0,6544,15380,15786,22552,
#Deleted in new
chr3_KI270936v1_alt	69805	85017	chr3_KI270936v1_alt:69805-85017	0	-	69805	69805	8553170	3	138,173,185,	0,6191,15027,
#Deleted in new
chr3_KI270936v1_alt	69888	85520	chr3_KI270936v1_alt:69888-85520	0	-	69888	69888	8553170	4	55,316,95,282,	0,1485,14944,15350,
#Deleted in new
chr3_KI270936v1_alt	71448	92035	chr3_KI270936v1_alt:71448-92035	0	-	71448	71448	8553170	4	241,95,135,31,	0,13384,13957,20556,
#Deleted in new
chr3_KI270936v1_alt	71478	85520	chr3_KI270936v1_alt:71478-85520	0	-	71478	71478	8553170	4	211,170,95,115,	0,4518,13354,13927,
#Deleted in new
chr3_KI270936v1_alt	71542	85516	chr3_KI270936v1_alt:71542-85516	1	-	71542	71542	8553170	5	147,173,95,85,111,	0,4454,13290,13618,13863,
#Deleted in new
chr3_KI270936v1_alt	72152	85496	chr3_KI270936v1_alt:72152-85496	0	-	72152	72152	8553170	3	325,95,91,	0,12680,13253,
#Deleted in new
chr3_KI270936v1_alt	75179	85496	chr3_KI270936v1_alt:75179-85496	0	-	75179	75179	8553170	2	407,664,	0,9653,
#Deleted in new
chr3_KI270936v1_alt	75301	85496	chr3_KI270936v1_alt:75301-85496	0	-	75301	75301	8553170	4	285,173,95,91,	0,695,9531,10104,
#Deleted in new
chr3_KI270936v1_alt	75513	85496	chr3_KI270936v1_alt:75513-85496	0	-	75513	75513	8553170	4	73,283,95,91,	0,483,9319,9892,
#Deleted in new
chr3_KI270936v1_alt	75996	85468	chr3_KI270936v1_alt:75996-85468	0	-	75996	75996	8553170	3	283,95,182,	0,8836,9290,
#Deleted in new
chr3_KI270936v1_alt	76073	85496	chr3_KI270936v1_alt:76073-85496	0	-	76073	76073	8553170	3	206,95,210,	0,8759,9213,
#Deleted in new
chr3_KI270936v1_alt	76183	85520	chr3_KI270936v1_alt:76183-85520	0	-	76183	76183	8553170	3	96,95,282,	0,8649,9055,
#Deleted in new
chr3_KI270936v1_alt	76412	85496	chr3_KI270936v1_alt:76412-85496	0	-	76412	76412	8553170	3	269,95,91,	0,8420,8993,
#Deleted in new
chr3_KI270936v1_alt	76414	85520	chr3_KI270936v1_alt:76414-85520	0	-	76414	76414	8553170	2	267,688,	0,8418,
#Deleted in new
chr3_KI270936v1_alt	76415	85496	chr3_KI270936v1_alt:76415-85496	0	-	76415	76415	8553170	3	207,95,91,	0,8417,8990,
#Deleted in new
chr3_KI270936v1_alt	76446	85520	chr3_KI270936v1_alt:76446-85520	0	-	76446	76446	8553170	2	176,688,	0,8386,
#Deleted in new
chr3_KI270936v1_alt	76453	85520	chr3_KI270936v1_alt:76453-85520	0	-	76453	76453	8553170	4	228,95,85,115,	0,8379,8707,8952,
#Deleted in new
chr3_KI270936v1_alt	76460	85520	chr3_KI270936v1_alt:76460-85520	0	-	76460	76460	8553170	3	221,95,282,	0,8372,8778,
#Deleted in new
chr3_KI270936v1_alt	76467	85496	chr3_KI270936v1_alt:76467-85496	0	-	76467	76467	8553170	3	214,95,210,	0,8365,8819,
#Deleted in new
chr3_KI270936v1_alt	76537	85520	chr3_KI270936v1_alt:76537-85520	0	-	76537	76537	8553170	3	144,95,360,	0,8295,8623,
#Deleted in new
chr3_KI270936v1_alt	77249	85520	chr3_KI270936v1_alt:77249-85520	0	-	77249	77249	8553170	3	583,95,115,	0,7583,8156,
#Deleted in new
chr3_KI270936v1_alt	77408	85520	chr3_KI270936v1_alt:77408-85520	1	-	77408	77408	8553170	3	54,53,688,	0,371,7424,
#Deleted in new
chr3_KI270936v1_alt	77545	85520	chr3_KI270936v1_alt:77545-85520	0	-	77545	77545	8553170	4	287,95,85,115,	0,7287,7615,7860,
#Deleted in new
chr3_KI270936v1_alt	77546	85520	chr3_KI270936v1_alt:77546-85520	0	-	77546	77546	8553170	3	286,95,234,	0,7286,7740,
#Deleted in new
chr3_KI270936v1_alt	77547	85386	chr3_KI270936v1_alt:77547-85386	0	-	77547	77547	8553170	2	285,554,	0,7285,
#Deleted in new
chr3_KI270936v1_alt	77549	85520	chr3_KI270936v1_alt:77549-85520	0	-	77549	77549	8553170	3	398,95,115,	0,7283,7856,
#Deleted in new
chr3_KI270936v1_alt	77573	85496	chr3_KI270936v1_alt:77573-85496	0	-	77573	77573	8553170	4	259,62,95,91,	0,1587,7259,7832,
#Deleted in new
chr3_KI270936v1_alt	77595	85496	chr3_KI270936v1_alt:77595-85496	0	-	77595	77595	8553170	4	237,62,95,258,	0,1565,7237,7643,
#Deleted in new
chr3_KI270936v1_alt	77630	85520	chr3_KI270936v1_alt:77630-85520	0	-	77630	77630	8553170	3	202,95,282,	0,7202,7608,
#Deleted in new
chr3_KI270936v1_alt	81798	93353	chr3_KI270936v1_alt:81798-93353	1	-	81798	81798	8553170	3	310,704,1349,	0,3034,10206,
#Deleted in new
chr3_KI270936v1_alt	81798	85527	chr3_KI270936v1_alt:81798-85527	0	-	81798	81798	8553170	3	310,95,289,	0,3034,3440,
#Deleted in new
chr3_KI270936v1_alt	81798	104299	chr3_KI270936v1_alt:81798-104299	0	-	81798	81798	8553170	4	310,95,135,64,	0,3034,3607,22437,
#Deleted in new
chr3_KI270936v1_alt	81798	85496	chr3_KI270936v1_alt:81798-85496	0	-	81798	81798	8553170	3	287,85,91,	0,3362,3607,
#Deleted in new
chr3_KI270936v1_alt	81798	85543	chr3_KI270936v1_alt:81798-85543	0	-	81798	81798	8553170	3	310,95,138,	0,3034,3607,
#Deleted in new
chr3_KI270936v1_alt	81880	85496	chr3_KI270936v1_alt:81880-85496	1	-	81880	81880	8553170	3	228,413,91,	0,2952,3525,
#Deleted in new
chr3_KI270936v1_alt	81901	85520	chr3_KI270936v1_alt:81901-85520	0	-	81901	81901	8553170	4	207,95,127,115,	0,2931,3217,3504,
#Deleted in new
chr3_KI270936v1_alt	81904	85520	chr3_KI270936v1_alt:81904-85520	0	-	81904	81904	8553170	3	204,95,360,	0,2928,3256,
#Deleted in new
chr3_KI270936v1_alt	81934	85520	chr3_KI270936v1_alt:81934-85520	0	-	81934	81934	8553170	3	174,95,234,	0,2898,3352,
#Deleted in new
chr3_KI270936v1_alt	81984	105290	chr3_KI270936v1_alt:81984-105290	0	-	81984	81984	789624	5	124,95,135,100,414,	0,2848,3421,22251,22892,
#Deleted in new
chr3_KI270936v1_alt	81992	85540	chr3_KI270936v1_alt:81992-85540	0	-	81992	81992	8553170	4	116,95,85,135,	0,2840,3168,3413,
#Deleted in new
chr3_KI270936v1_alt	81992	94526	chr3_KI270936v1_alt:81992-94526	0	-	81992	81992	8553170	4	116,95,254,60,	0,2840,3294,12474,
#Deleted in new
chr3_KI270936v1_alt	82003	105027	chr3_KI270936v1_alt:82003-105027	0	-	82003	82003	8553170	4	105,95,135,151,	0,2829,3402,22873,
#Deleted in new
chr3_KI270936v1_alt	84086	85520	chr3_KI270936v1_alt:84086-85520	1	-	84086	84086	8553170	2	841,282,	0,1152,
#Deleted in new
chr3_KI270936v1_alt	84110	85520	chr3_KI270936v1_alt:84110-85520	0	-	84110	84110	8553170	2	817,115,	0,1295,
#Deleted in new
chr3_KI270936v1_alt	84287	85520	chr3_KI270936v1_alt:84287-85520	0	-	84287	84287	8553170	2	640,234,	0,999,
#Deleted in new
chr3_KI270936v1_alt	84401	85496	chr3_KI270936v1_alt:84401-85496	0	-	84401	84401	8553170	3	289,95,258,	0,431,837,
#Deleted in new
chr3_KI270936v1_alt	84454	85520	chr3_KI270936v1_alt:84454-85520	0	-	84454	84454	8553170	3	473,85,115,	0,706,951,
#Deleted in new
chr3_KI270936v1_alt	84832	85520	chr3_KI270936v1_alt:84832-85520	0	-	84832	84832	8553170	1	688,	0,
#Deleted in new
chr3_KI270936v1_alt	84837	107753	chr3_KI270936v1_alt:84837-107753	1	-	84837	84837	8553170	5	90,265,118,92,19,	0,20039,20517,22447,22897,
#Deleted in new
chr3_KI270936v1_alt	84864	97172	chr3_KI270936v1_alt:84864-97172	0	-	84864	84864	8553170	6	63,85,135,290,178,88,	0,296,541,7140,9602,12220,
#Deleted in new
chr3_KI270936v1_alt	84866	104296	chr3_KI270936v1_alt:84866-104296	0	-	84866	84866	8553170	5	61,85,135,63,61,	0,294,539,19199,19369,
#Deleted in new
chr3_KI270936v1_alt	84866	92235	chr3_KI270936v1_alt:84866-92235	0	-	84866	84866	8553170	4	61,302,98,231,	0,372,1681,7138,
#Deleted in new
chr3_KI270936v1_alt	84866	104323	chr3_KI270936v1_alt:84866-104323	0	-	84866	84866	8553170	6	61,302,53,178,229,88,	0,372,7375,9600,12218,19369,
#Deleted in new
chr3_KI270936v1_alt	84866	104992	chr3_KI270936v1_alt:84866-104992	0	-	84866	84866	8553170	5	674,116,178,100,116,	0,7312,9600,19369,20010,
#Deleted in new
chr3_KI270936v1_alt	84866	105153	chr3_KI270936v1_alt:84866-105153	0	-	84866	84866	8553170	5	61,302,178,100,277,	0,372,9600,19369,20010,
#Deleted in new
chr3_KI270936v1_alt	84866	104276	chr3_KI270936v1_alt:84866-104276	1	-	84866	84866	8553170	4	674,121,178,41,	0,1681,9600,19369,
#Deleted in new
chr3_KI270936v1_alt	84866	104894	chr3_KI270936v1_alt:84866-104894	0	-	84866	84866	8553170	6	61,116,178,229,100,18,	0,7312,9600,12218,19369,20010,
#Deleted in new
chr3_KI270936v1_alt	84866	105126	chr3_KI270936v1_alt:84866-105126	0	-	84866	84866	8553170	5	61,135,290,110,250,	0,539,7138,9600,20010,
#Deleted in new
chr3_KI270936v1_alt	84866	112395	chr3_KI270936v1_alt:84866-112395	1	-	84866	84866	8553170	8	61,135,290,178,229,114,131,23,	0,539,7138,9600,12218,24942,27141,27506,
#Deleted in new
chr3_KI270936v1_alt	84866	107853	chr3_KI270936v1_alt:84866-107853	0	-	84866	84866	8553170	6	61,135,63,100,265,127,	0,539,19199,19369,20010,22860,
#Deleted in new
chr3_KI270936v1_alt	84866	105004	chr3_KI270936v1_alt:84866-105004	0	-	84866	84866	8553170	4	61,302,178,128,	0,372,9600,20010,
#Deleted in new
chr3_KI270936v1_alt	84866	100324	chr3_KI270936v1_alt:84866-100324	0	-	84866	84866	8553170	3	61,135,146,	0,539,15312,
#Deleted in new
chr3_KI270936v1_alt	84866	95011	chr3_KI270936v1_alt:84866-95011	0	-	84866	84866	8553170	2	61,545,	0,9600,
#Deleted in new
chr3_KI270936v1_alt	84866	87536	chr3_KI270936v1_alt:84866-87536	0	-	84866	84866	8553170	2	674,174,	0,2496,
#Deleted in new
chr3_KI270936v1_alt	84866	86979	chr3_KI270936v1_alt:84866-86979	0	-	84866	84866	8553170	3	61,302,432,	0,372,1681,
#Deleted in new
chr3_KI270936v1_alt	84866	104916	chr3_KI270936v1_alt:84866-104916	1	-	84866	84866	8553170	6	61,254,82,116,178,40,	0,420,7138,7312,9600,20010,
#Deleted in new
chr3_KI270936v1_alt	84867	104918	chr3_KI270936v1_alt:84867-104918	1	-	84867	84867	8553170	6	60,302,149,229,100,42,	0,371,9628,12217,19368,20009,
#Deleted in new
chr3_KI270936v1_alt	84867	112058	chr3_KI270936v1_alt:84867-112058	0	-	84867	84867	8553170	4	60,265,114,51,	0,20009,24941,27140,
#Deleted in new
chr3_KI270936v1_alt	84869	88013	chr3_KI270936v1_alt:84869-88013	0	-	84869	84869	8553170	2	671,75,	0,3069,
#Deleted in new
chr3_KI270936v1_alt	84872	109901	chr3_KI270936v1_alt:84872-109901	0	-	84872	84872	8553170	6	55,135,178,229,265,93,	0,533,9594,12212,20004,24936,
#Deleted in new
chr3_KI270936v1_alt	84872	107359	chr3_KI270936v1_alt:84872-107359	1	-	84872	84872	8553170	8	55,302,53,178,100,265,128,75,	0,366,7369,9594,19363,20004,20482,22412,
#Deleted in new
chr3_KI270936v1_alt	84896	105023	chr3_KI270936v1_alt:84896-105023	1	-	84896	84896	8553170	4	644,63,100,147,	0,19169,19339,19980,
#Deleted in new
chr3_KI270936v1_alt	84899	94591	chr3_KI270936v1_alt:84899-94591	0	-	84899	84899	8553170	4	28,302,290,125,	0,339,7105,9567,
#Deleted in new
chr3_KI270936v1_alt	84913	92551	chr3_KI270936v1_alt:84913-92551	0	-	84913	84913	8553170	3	14,302,547,	0,325,7091,
#Deleted in new
chr3_KI270936v1_alt	84971	104260	chr3_KI270936v1_alt:84971-104260	0	-	84971	84971	8553170	3	569,178,25,	0,9495,19264,
#Deleted in new
chr3_KI270936v1_alt	85169	109920	chr3_KI270936v1_alt:85169-109920	0	-	85169	85169	8553170	4	371,121,265,112,	0,1378,19707,24639,
#Deleted in new
chr3_KI270936v1_alt	85169	97237	chr3_KI270936v1_alt:85169-97237	0	-	85169	85169	8553170	3	371,178,153,	0,9297,11915,
#Deleted in new
chr3_KI270936v1_alt	85169	109924	chr3_KI270936v1_alt:85169-109924	0	-	85169	85169	8553170	4	371,265,122,116,	0,19707,22565,24639,
#Deleted in new
chr3_KI270936v1_alt	85205	105092	chr3_KI270936v1_alt:85205-105092	0	-	85205	85205	8553170	3	335,178,216,	0,9261,19671,
#Deleted in new
chr3_KI270936v1_alt	85303	94635	chr3_KI270936v1_alt:85303-94635	1	-	85303	85303	8553170	4	237,260,290,169,	0,5928,6701,9163,
#Deleted in new
chr3_KI270936v1_alt	85328	109841	chr3_KI270936v1_alt:85328-109841	0	-	85328	85328	8553170	3	212,265,33,	0,19548,24480,
#Deleted in new
chr3_KI270936v1_alt	85348	112058	chr3_KI270936v1_alt:85348-112058	1	-	85348	85348	8553170	7	192,100,265,118,122,114,51,	0,18887,19528,20006,22386,24460,26659,
#Deleted in new
chr3_KI270936v1_alt	85405	109924	chr3_KI270936v1_alt:85405-109924	0	-	85405	85405	8553170	5	135,100,265,115,116,	0,18830,19471,21550,24403,
#Deleted in new
chr3_KI270936v1_alt	85443	112058	chr3_KI270936v1_alt:85443-112058	0	-	85443	85443	8553170	6	97,100,265,122,114,51,	0,18792,19433,22291,24365,26564,
#Deleted in new
chr3_KI270936v1_alt	92052	95028	chr3_KI270936v1_alt:92052-95028	0	-	92052	92052	8553170	2	242,562,	0,2414,
#Deleted in new
chr3_KI270936v1_alt	92089	105853	chr3_KI270936v1_alt:92089-105853	1	-	92089	92089	8553170	6	205,178,229,100,265,499,	0,2377,4995,12146,12787,13265,
#Deleted in new
chr3_KI270936v1_alt	92159	107257	chr3_KI270936v1_alt:92159-107257	0	-	92159	92159	8553170	4	135,178,265,202,	0,2307,12717,14896,
#Deleted in new
chr3_KI270936v1_alt	92266	107371	chr3_KI270936v1_alt:92266-107371	1	-	92266	92266	8553170	6	28,178,229,265,112,45,	0,2200,4818,12610,14689,15060,
#Deleted in new
chr3_KI270936v1_alt	94359	104337	chr3_KI270936v1_alt:94359-104337	0	-	94359	94359	8553170	3	285,229,102,	0,2725,9876,
#Deleted in new
chr3_KI270936v1_alt	94503	105853	chr3_KI270936v1_alt:94503-105853	0	-	94503	94503	8553170	4	141,100,265,499,	0,9732,10373,10851,
#Deleted in new
chr3_KI270936v1_alt	94557	105248	chr3_KI270936v1_alt:94557-105248	0	-	94557	94557	8553170	5	87,229,63,100,372,	0,2527,9508,9678,10319,
#Deleted in new
chr3_KI270936v1_alt	97119	104249	chr3_KI270936v1_alt:97119-104249	0	-	97119	97119	8553170	2	194,184,	0,6946,
#Deleted in new
chr3_KI270936v1_alt	97132	105307	chr3_KI270936v1_alt:97132-105307	0	-	97132	97132	8553170	3	181,100,431,	0,7103,7744,
#Deleted in new
chr3_KI270936v1_alt	97149	112071	chr3_KI270936v1_alt:97149-112071	0	-	97149	97149	8553170	5	164,265,122,114,64,	0,7727,10585,12659,14858,
#Deleted in new
chr3_KI270936v1_alt	97194	105563	chr3_KI270936v1_alt:97194-105563	0	-	97194	97194	8553170	2	119,687,	0,7682,
#Deleted in new
chr3_KI270936v1_alt	97248	115890	chr3_KI270936v1_alt:97248-115890	0	-	97248	97248	8553170	7	65,100,265,114,131,112,65,	0,6987,7628,12560,14759,15124,18577,
#Deleted in new
chr3_KI270936v1_alt	104235	112782	chr3_KI270936v1_alt:104235-112782	0	-	104235	104235	8553170	6	100,265,114,131,112,70,	0,641,5573,7772,8137,8477,
#Deleted in new
chr3_KI270936v1_alt	104811	135609	chr3_KI270936v1_alt:104811-135609	0	-	104811	104811	789624	14	330,114,131,112,122,170,196,169,123,149,165,163,86,101,	0,4997,7196,7561,11014,14875,16183,17562,20221,22648,24612,26129,27021,30697,
#Deleted in new
chr3_KI270936v1_alt	104903	107462	chr3_KI270936v1_alt:104903-107462	1	-	104903	104903	8553170	4	238,122,187,136,	0,451,2152,2423,
#Deleted in new
chr3_KI270936v1_alt	105120	111805	chr3_KI270936v1_alt:105120-111805	0	-	105120	105120	8553170	3	21,114,349,	0,4688,6336,
#Deleted in new
chr3_KI270936v1_alt	106955	109897	chr3_KI270936v1_alt:106955-109897	0	-	106955	106955	8553170	4	112,92,122,89,	0,329,779,2853,
#Deleted in new
chr3_KI270936v1_alt	107302	111686	chr3_KI270936v1_alt:107302-111686	0	-	107302	107302	8553170	3	554,114,230,	0,2506,4154,
#Deleted in new
chr3_KI270936v1_alt	107326	112108	chr3_KI270936v1_alt:107326-112108	0	-	107326	107326	8553170	3	530,114,101,	0,2482,4681,
#Deleted in new
chr3_KI270936v1_alt	107333	110214	chr3_KI270936v1_alt:107333-110214	0	-	107333	107333	8553170	2	523,406,	0,2475,
#Deleted in new
chr3_KI270936v1_alt	107413	111303	chr3_KI270936v1_alt:107413-111303	0	-	107413	107413	8553170	3	443,114,51,	0,2395,3839,
#Deleted in new
chr3_KI270936v1_alt	107533	135597	chr3_KI270936v1_alt:107533-135597	1	-	107533	107533	8553170	14	2389,131,112,122,170,196,169,123,149,165,144,163,86,89,	0,4474,4839,8292,12153,13461,14840,17499,19926,21890,22373,23407,24299,27975,
#Deleted in new
chr3_KI270936v1_alt	107769	135578	chr3_KI270936v1_alt:107769-135578	7	-	107769	107769	16724991	15	87,114,131,112,122,170,196,169,123,149,165,144,163,86,70,	0,2039,4238,4603,8056,11917,13225,14604,17263,19690,21654,22137,23171,24063,27739,
#Deleted in new
chr3_KI270936v1_alt	111580	115919	chr3_KI270936v1_alt:111580-115919	0	-	111580	111580	8553170	3	558,112,94,	0,792,4245,
#Deleted in new
chr3_KI270936v1_alt	115606	121067	chr3_KI270936v1_alt:115606-121067	0	-	115606	115606	8553170	3	341,170,73,	0,4080,5388,
#Deleted in new
chr3_KI270936v1_alt	121882	135601	chr3_KI270936v1_alt:121882-135601	1	-	121882	121882	8553170	7	660,123,149,165,163,86,93,	0,3150,5577,7541,9058,9950,13626,
#Deleted in new
chr3_KI270936v1_alt	126991	135612	chr3_KI270936v1_alt:126991-135612	1	-	126991	126991	8553170	6	617,165,144,163,86,104,	0,2432,2915,3949,4841,8517,
#Deleted in new
chr3_KI270936v1_alt	129385	135581	chr3_KI270936v1_alt:129385-135581	0	-	129385	129385	8553170	4	203,163,86,73,	0,1555,2447,6123,
#Deleted in new
chr3_KI270936v1_alt	129564	135609	chr3_KI270936v1_alt:129564-135609	1	-	129564	129564	8553170	5	24,209,163,86,101,	0,277,1376,2268,5944,
#Deleted in new
chr3_KI270936v1_alt	135746	138109	chr3_KI270936v1_alt:135746-138109	3	+	135746	135746	8553170	3	623,90,971,	0,1197,1392,
#Deleted in new
chr3_KI270936v1_alt	142201	143528	chr3_KI270936v1_alt:142201-143528	7	+	142201	142201	16724991	2	748,322,	0,1005,
#Deleted in new
chr3_KI270937v1_alt	3238	47678	chr3_KI270937v1_alt:3238-47678	0	+	3238	47560	789624	23	12708,153,134,165,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19681,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270937v1_alt	3238	47971	chr3_KI270937v1_alt:3238-47971	1	+	3238	47560	789624	24	12708,153,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,616,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270937v1_alt	3238	47678	chr3_KI270937v1_alt:3238-47678	0	+	3238	24401	789624	22	12708,167,134,165,156,131,89,180,126,120,209,91,168,102,234,138,154,74,65,224,163,323,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,38293,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270937v1_alt	3238	47678	chr3_KI270937v1_alt:3238-47678	0	+	3238	28016	789624	23	12708,153,134,89,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19757,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270937v1_alt	3238	47678	chr3_KI270937v1_alt:3238-47678	0	+	3238	28050	789624	23	12708,153,134,89,103,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19757,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270937v1_alt	3238	47971	chr3_KI270937v1_alt:3238-47971	0	+	3238	41550	789624	23	12708,153,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,180,74,65,224,163,616,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270937v1_alt	3238	47678	chr3_KI270937v1_alt:3238-47678	0	+	3238	28016	789624	24	12708,153,134,165,156,103,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270937v1_alt	3238	47678	chr3_KI270937v1_alt:3238-47678	2	+	3238	24401	789624	24	12708,153,134,89,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19757,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270937v1_alt	3238	47678	chr3_KI270937v1_alt:3238-47678	0	+	3238	24401	789624	24	12708,167,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19681,21126,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270937v1_alt	3238	47678	chr3_KI270937v1_alt:3238-47678	0	+	3238	28016	789624	23	12708,153,134,165,103,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,323,	0,13042,17192,19681,22345,24746,26048,26375,27333,27856,28552,29243,29912,30380,32236,34169,37125,38267,39051,40226,40385,42433,44117,
#Deleted in new
chr3_KI270937v1_alt	15925	47971	chr3_KI270937v1_alt:15925-47971	0	+	15925	23856	789624	24	21,167,134,165,209,156,131,89,180,126,120,209,91,168,102,234,138,182,180,74,65,224,163,616,	0,355,4505,6994,7924,8439,9658,12059,13361,13688,14646,15169,15865,16556,17225,17693,19549,21482,25580,26364,27539,27698,29746,31430,
#Deleted in new
chr3_KI270937v1_alt	15925	47971	chr3_KI270937v1_alt:15925-47971	0	+	15925	24401	789624	23	21,153,134,89,156,131,89,180,126,120,209,91,168,102,234,138,182,180,74,65,224,163,616,	0,355,4505,7070,8439,9658,12059,13361,13688,14646,15169,15865,16556,17225,17693,19549,21482,25580,26364,27539,27698,29746,31430,
#Deleted in new
chr3_KI270937v1_alt	15925	47971	chr3_KI270937v1_alt:15925-47971	0	+	15925	24401	789624	24	21,153,134,89,156,103,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,616,	0,355,4505,7070,8439,9658,12059,13361,13688,14646,15169,15865,16556,17225,17693,19549,21482,24438,25580,26364,27539,27698,29746,31430,
#Deleted in new
chr3_KI270937v1_alt	15925	47971	chr3_KI270937v1_alt:15925-47971	0	+	15925	24401	789624	23	21,167,134,165,156,131,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,616,	0,355,4505,6994,8439,9658,13361,13688,14646,15169,15865,16556,17225,17693,19549,21482,24438,25580,26364,27539,27698,29746,31430,
#Deleted in new
chr3_KI270937v1_alt	15925	47971	chr3_KI270937v1_alt:15925-47971	0	+	15925	24401	789624	23	21,153,134,89,156,131,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,616,	0,355,4505,7070,8439,9658,13361,13688,14646,15169,15865,16556,17225,17693,19549,21482,24438,25580,26364,27539,27698,29746,31430,
#Deleted in new
chr3_KI270937v1_alt	16280	47971	chr3_KI270937v1_alt:16280-47971	0	+	16280	47560	789624	23	153,134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,616,	0,4150,6639,8084,9303,11704,13006,13333,14291,14814,15510,16201,16870,17338,19194,21127,24083,25225,26009,27184,27343,29391,31075,
#Deleted in new
chr3_KI270937v1_alt	20430	47971	chr3_KI270937v1_alt:20430-47971	0	+	20430	47560	789624	22	134,165,156,131,89,180,126,120,209,91,168,102,234,138,182,160,180,74,65,224,163,616,	0,2489,3934,5153,7554,8856,9183,10141,10664,11360,12051,12720,13188,15044,16977,19933,21075,21859,23034,23193,25241,26925,
#Deleted in new
chr3_KI270937v1_alt	25047	28074	chr3_KI270937v1_alt:25047-28074	0	+	25047	25047	8553170	3	332,131,90,	0,536,2937,
#Deleted in new
chr3_KI270937v1_alt	40741	47563	chr3_KI270937v1_alt:40741-47563	0	+	40741	40741	8553170	6	944,74,65,224,163,208,	0,1548,2723,2882,4930,6614,
#Deleted in new
chr3_KI270937v1_alt	41632	44129	chr3_KI270937v1_alt:41632-44129	0	+	41632	41632	8553170	4	53,74,65,506,	0,657,1832,1991,
#Deleted in new
chr3_KI270937v1_alt	42215	44880	chr3_KI270937v1_alt:42215-44880	0	+	42215	42215	8553170	2	1314,1257,	0,1408,
#Deleted in new
chr3_KI270937v1_alt	53723	68497	chr3_KI270937v1_alt:53723-68497	0	-	53859	68497	789624	4	142,84,92,200,	0,1198,11406,14574,
#Deleted in new
chr3_KI270937v1_alt	54887	86928	chr3_KI270937v1_alt:54887-86928	0	-	54887	54887	8553170	3	118,95,253,	0,31382,31788,
#Deleted in new
chr3_KI270937v1_alt	59806	86825	chr3_KI270937v1_alt:59806-86825	0	-	59806	59806	8553170	3	309,95,150,	0,26463,26869,
#Deleted in new
chr3_KI270937v1_alt	59837	73534	chr3_KI270937v1_alt:59837-73534	3	-	60004	73413	789624	4	278,92,1431,197,	0,5292,8460,13500,
#Deleted in new
chr3_KI270937v1_alt	60094	86385	chr3_KI270937v1_alt:60094-86385	0	-	60094	60094	8553170	3	21,92,116,	0,5035,26175,
#Deleted in new
chr3_KI270937v1_alt	61317	70181	chr3_KI270937v1_alt:61317-70181	1	-	61652	69699	789624	3	404,92,1884,	0,3812,6980,
#Deleted in new
chr3_KI270937v1_alt	61319	73536	chr3_KI270937v1_alt:61319-73536	1	-	61652	73413	789624	4	402,92,1431,199,	0,3810,6978,12018,
#Deleted in new
chr3_KI270937v1_alt	61319	86957	chr3_KI270937v1_alt:61319-86957	0	-	61319	61319	8553170	2	402,688,	0,24950,
#Deleted in new
chr3_KI270937v1_alt	61319	86957	chr3_KI270937v1_alt:61319-86957	0	-	61319	61319	8553170	4	402,92,95,115,	0,3810,24950,25523,
#Deleted in new
chr3_KI270937v1_alt	61321	86861	chr3_KI270937v1_alt:61321-86861	0	-	61321	61321	8553170	3	400,95,138,	0,24948,25402,
#Deleted in new
chr3_KI270937v1_alt	61364	86528	chr3_KI270937v1_alt:61364-86528	0	-	61364	61364	8553170	3	357,92,259,	0,3765,24905,
#Deleted in new
chr3_KI270937v1_alt	61492	86957	chr3_KI270937v1_alt:61492-86957	1	-	61492	61492	8553170	5	229,92,209,95,115,	0,3637,3825,24777,25350,
#Deleted in new
chr3_KI270937v1_alt	61515	86926	chr3_KI270937v1_alt:61515-86926	0	-	61515	61515	8553170	4	206,283,95,84,	0,14702,24754,25327,
#Deleted in new
chr3_KI270937v1_alt	61524	86957	chr3_KI270937v1_alt:61524-86957	0	-	61524	61524	8553170	4	197,92,95,282,	0,3605,24745,25151,
#Deleted in new
chr3_KI270937v1_alt	61558	86957	chr3_KI270937v1_alt:61558-86957	0	-	61558	61558	8553170	4	163,95,85,115,	0,24711,25039,25284,
#Deleted in new
chr3_KI270937v1_alt	61610	86957	chr3_KI270937v1_alt:61610-86957	0	-	61610	61610	8553170	5	111,92,170,95,234,	0,3519,14607,24659,25113,
#Deleted in new
chr3_KI270937v1_alt	61626	86957	chr3_KI270937v1_alt:61626-86957	0	-	61626	61626	8553170	4	95,283,95,282,	0,14591,24643,25049,
#Deleted in new
chr3_KI270937v1_alt	61674	86933	chr3_KI270937v1_alt:61674-86933	1	-	61674	61674	8553170	5	47,92,283,95,258,	0,3455,14543,24595,25001,
#Deleted in new
chr3_KI270937v1_alt	64753	68687	chr3_KI270937v1_alt:64753-68687	0	-	64753	64753	8553170	2	468,390,	0,3544,
#Deleted in new
chr3_KI270937v1_alt	65333	86957	chr3_KI270937v1_alt:65333-86957	0	-	65333	65333	8553170	3	193,95,282,	0,20936,21342,
#Deleted in new
chr3_KI270937v1_alt	69220	86957	chr3_KI270937v1_alt:69220-86957	0	-	69220	69220	8553170	3	508,95,115,	0,17049,17622,
#Deleted in new
chr3_KI270937v1_alt	69313	73446	chr3_KI270937v1_alt:69313-73446	0	-	69313	69313	8553170	2	470,109,	0,4024,
#Deleted in new
chr3_KI270937v1_alt	69326	86631	chr3_KI270937v1_alt:69326-86631	0	-	69326	69326	8553170	2	402,362,	0,16943,
#Deleted in new
chr3_KI270937v1_alt	69352	86933	chr3_KI270937v1_alt:69352-86933	1	-	69352	69352	8553170	4	376,170,95,210,	0,6865,16917,17371,
#Deleted in new
chr3_KI270937v1_alt	69377	86957	chr3_KI270937v1_alt:69377-86957	0	-	69377	69377	8553170	3	351,95,282,	0,16892,17298,
#Deleted in new
chr3_KI270937v1_alt	69385	86949	chr3_KI270937v1_alt:69385-86949	1	-	69385	69385	8553170	4	343,153,95,107,	0,6832,16884,17457,
#Deleted in new
chr3_KI270937v1_alt	69531	86933	chr3_KI270937v1_alt:69531-86933	0	-	69531	69531	8553170	4	197,95,85,91,	0,16738,17066,17311,
#Deleted in new
chr3_KI270937v1_alt	69589	86956	chr3_KI270937v1_alt:69589-86956	0	-	69589	69589	8553170	4	139,173,95,114,	0,6628,16680,17253,
#Deleted in new
chr3_KI270937v1_alt	69590	73470	chr3_KI270937v1_alt:69590-73470	0	-	69590	69590	8553170	3	138,318,133,	0,2001,3747,
#Deleted in new
chr3_KI270937v1_alt	69607	86957	chr3_KI270937v1_alt:69607-86957	0	-	69607	69607	8553170	4	121,318,95,115,	0,1984,16662,17235,
#Deleted in new
chr3_KI270937v1_alt	69640	86957	chr3_KI270937v1_alt:69640-86957	0	-	69640	69640	8553170	4	88,318,95,282,	0,1951,16629,17035,
#Deleted in new
chr3_KI270937v1_alt	69654	86869	chr3_KI270937v1_alt:69654-86869	1	-	69654	69654	8553170	3	74,318,600,	0,1937,16615,
#Deleted in new
chr3_KI270937v1_alt	69670	93554	chr3_KI270937v1_alt:69670-93554	0	-	69670	69670	8553170	5	58,170,95,302,113,	0,6547,16599,17005,23771,
#Deleted in new
chr3_KI270937v1_alt	70023	86454	chr3_KI270937v1_alt:70023-86454	0	-	70023	70023	8553170	3	138,173,185,	0,6194,16246,
#Deleted in new
chr3_KI270937v1_alt	70106	86957	chr3_KI270937v1_alt:70106-86957	0	-	70106	70106	8553170	4	55,318,95,282,	0,1485,16163,16569,
#Deleted in new
chr3_KI270937v1_alt	71666	93472	chr3_KI270937v1_alt:71666-93472	0	-	71666	71666	8553170	4	243,95,135,31,	0,14603,15176,21775,
#Deleted in new
chr3_KI270937v1_alt	71696	86957	chr3_KI270937v1_alt:71696-86957	0	-	71696	71696	8553170	4	213,170,95,115,	0,4521,14573,15146,
#Deleted in new
chr3_KI270937v1_alt	71760	86953	chr3_KI270937v1_alt:71760-86953	1	-	71760	71760	8553170	5	149,173,95,85,111,	0,4457,14509,14837,15082,
#Deleted in new
chr3_KI270937v1_alt	72372	86933	chr3_KI270937v1_alt:72372-86933	0	-	72372	72372	8553170	3	325,95,91,	0,13897,14470,
#Deleted in new
chr3_KI270937v1_alt	75403	86933	chr3_KI270937v1_alt:75403-86933	0	-	75403	75403	8553170	2	404,664,	0,10866,
#Deleted in new
chr3_KI270937v1_alt	75522	86933	chr3_KI270937v1_alt:75522-86933	0	-	75522	75522	8553170	4	285,173,95,91,	0,695,10747,11320,
#Deleted in new
chr3_KI270937v1_alt	75734	86933	chr3_KI270937v1_alt:75734-86933	0	-	75734	75734	8553170	4	73,283,95,91,	0,483,10535,11108,
#Deleted in new
chr3_KI270937v1_alt	76217	86905	chr3_KI270937v1_alt:76217-86905	0	-	76217	76217	8553170	3	283,95,182,	0,10052,10506,
#Deleted in new
chr3_KI270937v1_alt	76294	86933	chr3_KI270937v1_alt:76294-86933	0	-	76294	76294	8553170	3	206,95,210,	0,9975,10429,
#Deleted in new
chr3_KI270937v1_alt	76404	86957	chr3_KI270937v1_alt:76404-86957	0	-	76404	76404	8553170	3	96,95,282,	0,9865,10271,
#Deleted in new
chr3_KI270937v1_alt	76633	86933	chr3_KI270937v1_alt:76633-86933	0	-	76633	76633	8553170	3	269,95,91,	0,9636,10209,
#Deleted in new
chr3_KI270937v1_alt	76635	86957	chr3_KI270937v1_alt:76635-86957	0	-	76635	76635	8553170	2	267,688,	0,9634,
#Deleted in new
chr3_KI270937v1_alt	76636	86933	chr3_KI270937v1_alt:76636-86933	0	-	76636	76636	8553170	3	207,95,91,	0,9633,10206,
#Deleted in new
chr3_KI270937v1_alt	76667	86957	chr3_KI270937v1_alt:76667-86957	0	-	76667	76667	8553170	2	176,688,	0,9602,
#Deleted in new
chr3_KI270937v1_alt	76674	86957	chr3_KI270937v1_alt:76674-86957	0	-	76674	76674	8553170	4	228,95,85,115,	0,9595,9923,10168,
#Deleted in new
chr3_KI270937v1_alt	76681	86957	chr3_KI270937v1_alt:76681-86957	0	-	76681	76681	8553170	3	221,95,282,	0,9588,9994,
#Deleted in new
chr3_KI270937v1_alt	76688	86933	chr3_KI270937v1_alt:76688-86933	0	-	76688	76688	8553170	3	214,95,210,	0,9581,10035,
#Deleted in new
chr3_KI270937v1_alt	76758	86957	chr3_KI270937v1_alt:76758-86957	0	-	76758	76758	8553170	3	144,95,360,	0,9511,9839,
#Deleted in new
chr3_KI270937v1_alt	77470	86957	chr3_KI270937v1_alt:77470-86957	0	-	77470	77470	8553170	3	583,95,115,	0,8799,9372,
#Deleted in new
chr3_KI270937v1_alt	77629	86957	chr3_KI270937v1_alt:77629-86957	1	-	77629	77629	8553170	3	54,53,688,	0,371,8640,
#Deleted in new
chr3_KI270937v1_alt	77766	86957	chr3_KI270937v1_alt:77766-86957	0	-	77766	77766	8553170	4	287,95,85,115,	0,8503,8831,9076,
#Deleted in new
chr3_KI270937v1_alt	77767	86957	chr3_KI270937v1_alt:77767-86957	0	-	77767	77767	8553170	3	286,95,234,	0,8502,8956,
#Deleted in new
chr3_KI270937v1_alt	77768	86823	chr3_KI270937v1_alt:77768-86823	0	-	77768	77768	8553170	2	285,554,	0,8501,
#Deleted in new
chr3_KI270937v1_alt	77770	86957	chr3_KI270937v1_alt:77770-86957	0	-	77770	77770	8553170	3	398,95,115,	0,8499,9072,
#Deleted in new
chr3_KI270937v1_alt	77794	86933	chr3_KI270937v1_alt:77794-86933	0	-	77794	77794	8553170	4	259,62,95,91,	0,1585,8475,9048,
#Deleted in new
chr3_KI270937v1_alt	77816	86933	chr3_KI270937v1_alt:77816-86933	0	-	77816	77816	8553170	4	237,62,95,258,	0,1563,8453,8859,
#Deleted in new
chr3_KI270937v1_alt	77851	86957	chr3_KI270937v1_alt:77851-86957	0	-	77851	77851	8553170	3	202,95,282,	0,8418,8824,
#Deleted in new
chr3_KI270937v1_alt	82065	86980	chr3_KI270937v1_alt:82065-86980	0	-	82065	82065	8553170	3	310,95,138,	0,4204,4777,
#Deleted in new
chr3_KI270937v1_alt	82065	105736	chr3_KI270937v1_alt:82065-105736	0	-	82065	82065	8553170	4	310,95,135,64,	0,4204,4777,23607,
#Deleted in new
chr3_KI270937v1_alt	82065	86933	chr3_KI270937v1_alt:82065-86933	0	-	82065	82065	8553170	3	287,85,91,	0,4532,4777,
#Deleted in new
chr3_KI270937v1_alt	82065	94790	chr3_KI270937v1_alt:82065-94790	1	-	82065	82065	8553170	3	310,704,1349,	0,4204,11376,
#Deleted in new
chr3_KI270937v1_alt	82065	86964	chr3_KI270937v1_alt:82065-86964	0	-	82065	82065	8553170	3	310,95,289,	0,4204,4610,
#Deleted in new
chr3_KI270937v1_alt	82147	86933	chr3_KI270937v1_alt:82147-86933	1	-	82147	82147	8553170	3	228,413,91,	0,4122,4695,
#Deleted in new
chr3_KI270937v1_alt	82168	86957	chr3_KI270937v1_alt:82168-86957	0	-	82168	82168	8553170	4	207,95,127,115,	0,4101,4387,4674,
#Deleted in new
chr3_KI270937v1_alt	82171	86957	chr3_KI270937v1_alt:82171-86957	0	-	82171	82171	8553170	3	204,95,360,	0,4098,4426,
#Deleted in new
chr3_KI270937v1_alt	82201	86957	chr3_KI270937v1_alt:82201-86957	0	-	82201	82201	8553170	3	174,95,234,	0,4068,4522,
#Deleted in new
chr3_KI270937v1_alt	82251	106727	chr3_KI270937v1_alt:82251-106727	0	-	82251	82251	789624	5	124,95,135,100,414,	0,4018,4591,23421,24062,
#Deleted in new
chr3_KI270937v1_alt	82259	95963	chr3_KI270937v1_alt:82259-95963	0	-	82259	82259	8553170	4	116,95,254,60,	0,4010,4464,13644,
#Deleted in new
chr3_KI270937v1_alt	82259	86977	chr3_KI270937v1_alt:82259-86977	0	-	82259	82259	8553170	4	116,95,85,135,	0,4010,4338,4583,
#Deleted in new
chr3_KI270937v1_alt	82270	106464	chr3_KI270937v1_alt:82270-106464	0	-	82270	82270	8553170	4	105,95,135,151,	0,3999,4572,24043,
#Deleted in new
chr3_KI270937v1_alt	85523	86957	chr3_KI270937v1_alt:85523-86957	1	-	85523	85523	8553170	2	841,282,	0,1152,
#Deleted in new
chr3_KI270937v1_alt	85547	86957	chr3_KI270937v1_alt:85547-86957	0	-	85547	85547	8553170	2	817,115,	0,1295,
#Deleted in new
chr3_KI270937v1_alt	85724	86957	chr3_KI270937v1_alt:85724-86957	0	-	85724	85724	8553170	2	640,234,	0,999,
#Deleted in new
chr3_KI270937v1_alt	85838	86933	chr3_KI270937v1_alt:85838-86933	0	-	85838	85838	8553170	3	289,95,258,	0,431,837,
#Deleted in new
chr3_KI270937v1_alt	85891	86957	chr3_KI270937v1_alt:85891-86957	0	-	85891	85891	8553170	3	473,85,115,	0,706,951,
#Deleted in new
chr3_KI270937v1_alt	86269	86957	chr3_KI270937v1_alt:86269-86957	0	-	86269	86269	8553170	1	688,	0,
#Deleted in new
chr3_KI270937v1_alt	86274	109190	chr3_KI270937v1_alt:86274-109190	1	-	86274	86274	8553170	5	90,265,118,92,19,	0,20039,20517,22447,22897,
#Deleted in new
chr3_KI270937v1_alt	86301	98609	chr3_KI270937v1_alt:86301-98609	0	-	86301	86301	8553170	6	63,85,135,290,178,88,	0,296,541,7140,9602,12220,
#Deleted in new
chr3_KI270937v1_alt	86303	105760	chr3_KI270937v1_alt:86303-105760	0	-	86303	86303	8553170	6	61,302,53,178,229,88,	0,372,7375,9600,12218,19369,
#Deleted in new
chr3_KI270937v1_alt	86303	106353	chr3_KI270937v1_alt:86303-106353	1	-	86303	86303	8553170	6	61,254,82,116,178,40,	0,420,7138,7312,9600,20010,
#Deleted in new
chr3_KI270937v1_alt	86303	88973	chr3_KI270937v1_alt:86303-88973	0	-	86303	86303	8553170	2	674,174,	0,2496,
#Deleted in new
chr3_KI270937v1_alt	86303	109290	chr3_KI270937v1_alt:86303-109290	0	-	86303	86303	8553170	6	61,135,63,100,265,127,	0,539,19199,19369,20010,22860,
#Deleted in new
chr3_KI270937v1_alt	86303	96448	chr3_KI270937v1_alt:86303-96448	0	-	86303	86303	8553170	2	61,545,	0,9600,
#Deleted in new
chr3_KI270937v1_alt	86303	106331	chr3_KI270937v1_alt:86303-106331	0	-	86303	86303	8553170	6	61,116,178,229,100,18,	0,7312,9600,12218,19369,20010,
#Deleted in new
chr3_KI270937v1_alt	86303	88416	chr3_KI270937v1_alt:86303-88416	0	-	86303	86303	8553170	3	61,302,432,	0,372,1681,
#Deleted in new
chr3_KI270937v1_alt	86303	106563	chr3_KI270937v1_alt:86303-106563	0	-	86303	86303	8553170	5	61,135,290,110,250,	0,539,7138,9600,20010,
#Deleted in new
chr3_KI270937v1_alt	86303	105713	chr3_KI270937v1_alt:86303-105713	1	-	86303	86303	8553170	4	674,121,178,41,	0,1681,9600,19369,
#Deleted in new
chr3_KI270937v1_alt	86303	106441	chr3_KI270937v1_alt:86303-106441	0	-	86303	86303	8553170	4	61,302,178,128,	0,372,9600,20010,
#Deleted in new
chr3_KI270937v1_alt	86303	106429	chr3_KI270937v1_alt:86303-106429	0	-	86303	86303	8553170	5	674,116,178,100,116,	0,7312,9600,19369,20010,
#Deleted in new
chr3_KI270937v1_alt	86303	101761	chr3_KI270937v1_alt:86303-101761	0	-	86303	86303	8553170	3	61,135,146,	0,539,15312,
#Deleted in new
chr3_KI270937v1_alt	86303	106590	chr3_KI270937v1_alt:86303-106590	0	-	86303	86303	8553170	5	61,302,178,100,277,	0,372,9600,19369,20010,
#Deleted in new
chr3_KI270937v1_alt	86303	113832	chr3_KI270937v1_alt:86303-113832	1	-	86303	86303	8553170	8	61,135,290,178,229,114,131,23,	0,539,7138,9600,12218,24942,27141,27506,
#Deleted in new
chr3_KI270937v1_alt	86303	105733	chr3_KI270937v1_alt:86303-105733	0	-	86303	86303	8553170	5	61,85,135,63,61,	0,294,539,19199,19369,
#Deleted in new
chr3_KI270937v1_alt	86303	93672	chr3_KI270937v1_alt:86303-93672	0	-	86303	86303	8553170	4	61,302,98,231,	0,372,1681,7138,
#Deleted in new
chr3_KI270937v1_alt	86304	113495	chr3_KI270937v1_alt:86304-113495	0	-	86304	86304	8553170	4	60,265,114,51,	0,20009,24941,27140,
#Deleted in new
chr3_KI270937v1_alt	86304	106355	chr3_KI270937v1_alt:86304-106355	1	-	86304	86304	8553170	6	60,302,149,229,100,42,	0,371,9628,12217,19368,20009,
#Deleted in new
chr3_KI270937v1_alt	86306	89450	chr3_KI270937v1_alt:86306-89450	0	-	86306	86306	8553170	2	671,75,	0,3069,
#Deleted in new
chr3_KI270937v1_alt	86309	108796	chr3_KI270937v1_alt:86309-108796	1	-	86309	86309	8553170	8	55,302,53,178,100,265,128,75,	0,366,7369,9594,19363,20004,20482,22412,
#Deleted in new
chr3_KI270937v1_alt	86309	111338	chr3_KI270937v1_alt:86309-111338	0	-	86309	86309	8553170	6	55,135,178,229,265,93,	0,533,9594,12212,20004,24936,
#Deleted in new
chr3_KI270937v1_alt	86333	106460	chr3_KI270937v1_alt:86333-106460	1	-	86333	86333	8553170	4	644,63,100,147,	0,19169,19339,19980,
#Deleted in new
chr3_KI270937v1_alt	86336	96028	chr3_KI270937v1_alt:86336-96028	0	-	86336	86336	8553170	4	28,302,290,125,	0,339,7105,9567,
#Deleted in new
chr3_KI270937v1_alt	86350	93988	chr3_KI270937v1_alt:86350-93988	0	-	86350	86350	8553170	3	14,302,547,	0,325,7091,
#Deleted in new
chr3_KI270937v1_alt	86408	105697	chr3_KI270937v1_alt:86408-105697	0	-	86408	86408	8553170	3	569,178,25,	0,9495,19264,
#Deleted in new
chr3_KI270937v1_alt	86606	111357	chr3_KI270937v1_alt:86606-111357	0	-	86606	86606	8553170	4	371,121,265,112,	0,1378,19707,24639,
#Deleted in new
chr3_KI270937v1_alt	86606	111361	chr3_KI270937v1_alt:86606-111361	0	-	86606	86606	8553170	4	371,265,122,116,	0,19707,22565,24639,
#Deleted in new
chr3_KI270937v1_alt	86606	98674	chr3_KI270937v1_alt:86606-98674	0	-	86606	86606	8553170	3	371,178,153,	0,9297,11915,
#Deleted in new
chr3_KI270937v1_alt	86642	106529	chr3_KI270937v1_alt:86642-106529	0	-	86642	86642	8553170	3	335,178,216,	0,9261,19671,
#Deleted in new
chr3_KI270937v1_alt	86740	96072	chr3_KI270937v1_alt:86740-96072	1	-	86740	86740	8553170	4	237,260,290,169,	0,5928,6701,9163,
#Deleted in new
chr3_KI270937v1_alt	86765	111278	chr3_KI270937v1_alt:86765-111278	0	-	86765	86765	8553170	3	212,265,33,	0,19548,24480,
#Deleted in new
chr3_KI270937v1_alt	86785	113495	chr3_KI270937v1_alt:86785-113495	1	-	86785	86785	8553170	7	192,100,265,118,122,114,51,	0,18887,19528,20006,22386,24460,26659,
#Deleted in new
chr3_KI270937v1_alt	86842	111361	chr3_KI270937v1_alt:86842-111361	0	-	86842	86842	8553170	5	135,100,265,115,116,	0,18830,19471,21550,24403,
#Deleted in new
chr3_KI270937v1_alt	86880	113495	chr3_KI270937v1_alt:86880-113495	0	-	86880	86880	8553170	6	97,100,265,122,114,51,	0,18792,19433,22291,24365,26564,
#Deleted in new
chr3_KI270937v1_alt	93489	96465	chr3_KI270937v1_alt:93489-96465	0	-	93489	93489	8553170	2	242,562,	0,2414,
#Deleted in new
chr3_KI270937v1_alt	93526	107290	chr3_KI270937v1_alt:93526-107290	3	-	93526	93526	8553170	6	205,178,229,100,265,499,	0,2377,4995,12146,12787,13265,
#Deleted in new
chr3_KI270937v1_alt	93596	108694	chr3_KI270937v1_alt:93596-108694	0	-	93596	93596	8553170	4	135,178,265,202,	0,2307,12717,14896,
#Deleted in new
chr3_KI270937v1_alt	93703	108808	chr3_KI270937v1_alt:93703-108808	1	-	93703	93703	8553170	6	28,178,229,265,112,45,	0,2200,4818,12610,14689,15060,
#Deleted in new
chr3_KI270937v1_alt	95796	105774	chr3_KI270937v1_alt:95796-105774	0	-	95796	95796	8553170	3	285,229,102,	0,2725,9876,
#Deleted in new
chr3_KI270937v1_alt	95940	107290	chr3_KI270937v1_alt:95940-107290	0	-	95940	95940	8553170	4	141,100,265,499,	0,9732,10373,10851,
#Deleted in new
chr3_KI270937v1_alt	95994	106685	chr3_KI270937v1_alt:95994-106685	0	-	95994	95994	8553170	5	87,229,63,100,372,	0,2527,9508,9678,10319,
#Deleted in new
chr3_KI270937v1_alt	98556	105686	chr3_KI270937v1_alt:98556-105686	0	-	98556	98556	8553170	2	194,184,	0,6946,
#Deleted in new
chr3_KI270937v1_alt	98569	106744	chr3_KI270937v1_alt:98569-106744	0	-	98569	98569	8553170	3	181,100,431,	0,7103,7744,
#Deleted in new
chr3_KI270937v1_alt	98586	113508	chr3_KI270937v1_alt:98586-113508	0	-	98586	98586	8553170	5	164,265,122,114,64,	0,7727,10585,12659,14858,
#Deleted in new
chr3_KI270937v1_alt	98631	107000	chr3_KI270937v1_alt:98631-107000	0	-	98631	98631	8553170	2	119,687,	0,7682,
#Deleted in new
chr3_KI270937v1_alt	98685	117327	chr3_KI270937v1_alt:98685-117327	0	-	98685	98685	8553170	7	65,100,265,114,131,112,65,	0,6987,7628,12560,14759,15124,18577,
#Deleted in new
chr3_KI270937v1_alt	105672	114219	chr3_KI270937v1_alt:105672-114219	0	-	105672	105672	8553170	6	100,265,114,131,112,70,	0,641,5573,7772,8137,8477,
#Deleted in new
chr3_KI270937v1_alt	106248	137046	chr3_KI270937v1_alt:106248-137046	0	-	106248	106248	789624	14	330,114,131,112,122,170,196,169,123,149,165,163,86,101,	0,4997,7196,7561,11014,14875,16183,17562,20221,22648,24612,26129,27021,30697,
#Deleted in new
chr3_KI270937v1_alt	106340	108899	chr3_KI270937v1_alt:106340-108899	1	-	106340	106340	8553170	4	238,122,187,136,	0,451,2152,2423,
#Deleted in new
chr3_KI270937v1_alt	106557	113242	chr3_KI270937v1_alt:106557-113242	0	-	106557	106557	8553170	3	21,114,349,	0,4688,6336,
#Deleted in new
chr3_KI270937v1_alt	108392	111334	chr3_KI270937v1_alt:108392-111334	0	-	108392	108392	8553170	4	112,92,122,89,	0,329,779,2853,
#Deleted in new
chr3_KI270937v1_alt	108739	113123	chr3_KI270937v1_alt:108739-113123	0	-	108739	108739	8553170	3	554,114,230,	0,2506,4154,
#Deleted in new
chr3_KI270937v1_alt	108763	113545	chr3_KI270937v1_alt:108763-113545	0	-	108763	108763	8553170	3	530,114,101,	0,2482,4681,
#Deleted in new
chr3_KI270937v1_alt	108770	111651	chr3_KI270937v1_alt:108770-111651	0	-	108770	108770	8553170	2	523,406,	0,2475,
#Deleted in new
chr3_KI270937v1_alt	108850	112740	chr3_KI270937v1_alt:108850-112740	0	-	108850	108850	8553170	3	443,114,51,	0,2395,3839,
#Deleted in new
chr3_KI270937v1_alt	108970	137034	chr3_KI270937v1_alt:108970-137034	1	-	108970	108970	8553170	14	2389,131,112,122,170,196,169,123,149,165,144,163,86,89,	0,4474,4839,8292,12153,13461,14840,17499,19926,21890,22373,23407,24299,27975,
#Deleted in new
chr3_KI270937v1_alt	109206	137015	chr3_KI270937v1_alt:109206-137015	7	-	109206	109206	16724991	15	87,114,131,112,122,170,196,169,123,149,165,144,163,86,70,	0,2039,4238,4603,8056,11917,13225,14604,17263,19690,21654,22137,23171,24063,27739,
#Deleted in new
chr3_KI270937v1_alt	113017	117356	chr3_KI270937v1_alt:113017-117356	0	-	113017	113017	8553170	3	558,112,94,	0,792,4245,
#Deleted in new
chr3_KI270937v1_alt	117043	122504	chr3_KI270937v1_alt:117043-122504	0	-	117043	117043	8553170	3	341,170,73,	0,4080,5388,
#Deleted in new
chr3_KI270937v1_alt	123319	137038	chr3_KI270937v1_alt:123319-137038	1	-	123319	123319	8553170	7	660,123,149,165,163,86,93,	0,3150,5577,7541,9058,9950,13626,
#Deleted in new
chr3_KI270937v1_alt	128428	137049	chr3_KI270937v1_alt:128428-137049	1	-	128428	128428	8553170	6	617,165,144,163,86,104,	0,2432,2915,3949,4841,8517,
#Deleted in new
chr3_KI270937v1_alt	130822	137018	chr3_KI270937v1_alt:130822-137018	0	-	130822	130822	8553170	4	203,163,86,73,	0,1555,2447,6123,
#Deleted in new
chr3_KI270937v1_alt	131001	137046	chr3_KI270937v1_alt:131001-137046	1	-	131001	131001	8553170	5	24,209,163,86,101,	0,277,1376,2268,5944,
#Deleted in new
chr3_KI270937v1_alt	137183	139546	chr3_KI270937v1_alt:137183-139546	3	+	137183	137183	8553170	3	623,90,971,	0,1197,1392,
#Deleted in new
chr3_KI270937v1_alt	143638	144965	chr3_KI270937v1_alt:143638-144965	7	+	143638	143638	16724991	2	748,322,	0,1005,
#Deleted in new
chr3_KN196475v1_fix	20200	27995	chr3_KN196475v1_fix:20200-27995	2	-	20291	27995	8553170	3	255,744,100,	0,5047,7695,
#Deleted in new
chr3_KN196475v1_fix	24323	35990	chr3_KN196475v1_fix:24323-35990	1	-	24498	28333	789624	4	1665,127,92,84,	0,3572,3995,11583,
#Deleted in new
chr3_KN196475v1_fix	24876	35990	chr3_KN196475v1_fix:24876-35990	0	-	24876	24876	8553170	3	1115,127,84,	0,3019,11030,
#Deleted in new
chr3_KN196475v1_fix	24929	28464	chr3_KN196475v1_fix:24929-28464	0	-	24929	24929	8553170	1	3535,	0,
#Deleted in new
chr3_KN196475v1_fix	50097	51159	chr3_KN196475v1_fix:50097-51159	7	-	50097	50097	16724991	1	1062,	0,
#Deleted in new
chr3_KN196475v1_fix	54308	54745	chr3_KN196475v1_fix:54308-54745	7	-	54308	54308	16724991	1	437,	0,
#Deleted in new
chr3_KN196475v1_fix	80546	108799	chr3_KN196475v1_fix:80546-108799	1	+	82401	108345	789624	6	289,541,169,92,127,474,	0,1737,10294,12719,13114,27779,
#Deleted in new
chr3_KN196475v1_fix	80546	96848	chr3_KN196475v1_fix:80546-96848	1	+	82401	96729	789624	6	289,541,169,92,127,1573,	0,1737,10294,12719,13114,14729,
#Deleted in new
chr3_KN196475v1_fix	80556	108837	chr3_KN196475v1_fix:80556-108837	3	+	82401	108345	789624	6	316,541,169,92,127,512,	0,1727,10284,12709,13104,27769,
#Deleted in new
chr3_KN196475v1_fix	80561	97512	chr3_KN196475v1_fix:80561-97512	1	+	82401	96729	789624	6	311,541,169,92,127,2237,	0,1722,10279,12704,13099,14714,
#Deleted in new
chr3_KN196475v1_fix	80582	95482	chr3_KN196475v1_fix:80582-95482	0	+	82401	93677	789624	5	253,541,169,127,204,	0,1701,10258,13078,14696,
#Deleted in new
chr3_KN196475v1_fix	80797	108660	chr3_KN196475v1_fix:80797-108660	0	+	90867	108345	789624	6	38,169,92,127,741,335,	0,10043,12468,12863,14481,27528,
#Deleted in new
chr3_KN196475v1_fix	82710	93831	chr3_KN196475v1_fix:82710-93831	0	+	82710	82710	8553170	4	114,169,92,171,	0,8130,10555,10950,
#Deleted in new
chr3_KN196475v1_fix	82710	211007	chr3_KN196475v1_fix:82710-211007	3	-	82710	82710	8553170	3	236,125,95,	0,103905,128202,
#Deleted in new
chr3_KN196475v1_fix	90912	119527	chr3_KN196475v1_fix:90912-119527	0	+	90912	119417	789624	4	97,92,127,160,	0,2353,2748,28455,
#Deleted in new
chr3_KN196475v1_fix	103576	119665	chr3_KN196475v1_fix:103576-119665	0	+	119547	119665	789624	3	67,109,298,	0,7882,15791,
#Deleted in new
chr3_KN196475v1_fix	105291	106380	chr3_KN196475v1_fix:105291-106380	7	-	105291	105291	16724991	1	1089,	0,
#Deleted in new
chr3_KN196475v1_fix	110241	154744	chr3_KN196475v1_fix:110241-154744	2	+	154508	154744	789624	3	120,109,317,	0,1217,44186,
#Deleted in new
chr3_KN196475v1_fix	110315	112056	chr3_KN196475v1_fix:110315-112056	0	+	110315	110315	8553170	2	46,598,	0,1143,
#Deleted in new
chr3_KN196475v1_fix	110317	125048	chr3_KN196475v1_fix:110317-125048	1	+	119547	120543	789624	3	44,109,5681,	0,1141,9050,
#Deleted in new
chr3_KN196475v1_fix	110317	119649	chr3_KN196475v1_fix:110317-119649	2	+	119547	119649	789624	4	44,109,121,282,	0,1141,2166,9050,
#Deleted in new
chr3_KN196475v1_fix	142481	150151	chr3_KN196475v1_fix:142481-150151	3	-	142481	142481	789624	2	547,76,	0,7594,
#Deleted in new
chr3_KN196475v1_fix	150372	172858	chr3_KN196475v1_fix:150372-172858	1	+	154508	171879	789624	6	125,471,160,92,127,1014,	0,4055,6043,7086,7454,21472,
#Deleted in new
chr3_KN196475v1_fix	150393	169574	chr3_KN196475v1_fix:150393-169574	1	+	154508	169574	789624	6	104,471,160,92,127,2321,	0,4034,6022,7065,7433,16860,
#Deleted in new
chr3_KN196475v1_fix	150402	173825	chr3_KN196475v1_fix:150402-173825	1	+	154508	171879	789624	6	95,480,160,92,127,1981,	0,4016,6013,7056,7424,21442,
#Deleted in new
chr3_KN196475v1_fix	150448	173132	chr3_KN196475v1_fix:150448-173132	0	+	154508	156299	789624	7	49,471,133,160,92,127,1288,	0,3979,5719,5967,7010,7378,21396,
#Deleted in new
chr3_KN196475v1_fix	154341	170616	chr3_KN196475v1_fix:154341-170616	1	+	154508	169574	789624	5	557,160,92,127,3363,	0,2074,3117,3485,12912,
#Deleted in new
chr3_KN196475v1_fix	174080	186143	chr3_KN196475v1_fix:174080-186143	1	+	176421	185301	789624	4	108,319,145,2089,	0,2214,3830,9974,
#Deleted in new
chr3_KN196475v1_fix	174094	184119	chr3_KN196475v1_fix:174094-184119	2	+	176421	184119	789624	4	94,316,145,65,	0,2203,3816,9960,
#Deleted in new
chr3_KN196475v1_fix	174094	178055	chr3_KN196475v1_fix:174094-178055	0	+	176421	178055	789624	3	71,316,145,	0,2203,3816,
#Deleted in new
chr3_KN196475v1_fix	174095	186145	chr3_KN196475v1_fix:174095-186145	1	+	176421	184174	789624	3	93,319,2091,	0,2199,9959,
#Deleted in new
chr3_KN196475v1_fix	174095	184232	chr3_KN196475v1_fix:174095-184232	1	+	176421	184174	789624	3	70,316,178,	0,2202,9959,
#Deleted in new
chr3_KN196475v1_fix	174098	184249	chr3_KN196475v1_fix:174098-184249	1	+	176421	184174	789624	3	67,319,195,	0,2196,9956,
#Deleted in new
chr3_KN196475v1_fix	192765	194718	chr3_KN196475v1_fix:192765-194718	3	+	192765	192765	8553170	1	1953,	0,
#Deleted in new
chr3_KN196475v1_fix	234660	236236	chr3_KN196475v1_fix:234660-236236	7	-	234660	234660	16724991	1	1576,	0,
#Deleted in new
chr3_KN196475v1_fix	237992	249179	chr3_KN196475v1_fix:237992-249179	3	+	245611	247802	789624	3	102,114,2957,	0,7560,8230,
#Deleted in new
chr3_KN196475v1_fix	237995	249181	chr3_KN196475v1_fix:237995-249181	1	+	245611	247802	789624	4	99,98,114,2959,	0,1945,7557,8227,
#Deleted in new
chr3_KN196475v1_fix	237995	248327	chr3_KN196475v1_fix:237995-248327	1	+	245611	247802	789624	3	95,114,2105,	0,7557,8227,
#Deleted in new
chr3_KN196475v1_fix	238025	246632	chr3_KN196475v1_fix:238025-246632	0	+	245611	246632	789624	3	69,114,410,	0,7527,8197,
#Deleted in new
chr3_KN196475v1_fix	254945	262433	chr3_KN196475v1_fix:254945-262433	3	+	259771	260587	789624	3	127,85,2887,	0,1880,4601,
#Deleted in new
chr3_KN196475v1_fix	254955	262433	chr3_KN196475v1_fix:254955-262433	1	+	259771	260587	789624	3	410,85,2887,	0,1870,4591,
#Deleted in new
chr3_KN196475v1_fix	254973	257269	chr3_KN196475v1_fix:254973-257269	0	+	254973	254973	8553170	2	99,444,	0,1852,
#Deleted in new
chr3_KN196475v1_fix	254980	259649	chr3_KN196475v1_fix:254980-259649	0	+	254980	254980	8553170	3	385,85,103,	0,1845,4566,
#Deleted in new
chr3_KN196475v1_fix	255130	257615	chr3_KN196475v1_fix:255130-257615	0	+	255130	255130	8553170	3	235,85,159,	0,1695,2326,
#Deleted in new
chr3_KN196475v1_fix	263010	286861	chr3_KN196475v1_fix:263010-286861	0	-	263010	263010	8553170	4	137,208,145,17,	0,15684,16563,23834,
#Deleted in new
chr3_KN196475v1_fix	274093	287012	chr3_KN196475v1_fix:274093-287012	3	-	278690	286952	789624	3	4809,145,168,	0,5480,12751,
#Deleted in new
chr3_KN196475v1_fix	287066	378611	chr3_KN196475v1_fix:287066-378611	3	+	287215	378085	0	35	168,43,184,77,38,98,180,210,126,123,124,77,210,178,142,142,198,108,106,166,151,86,70,87,105,123,147,102,165,110,73,38,166,132,589,	0,12678,13537,16398,19168,23128,24678,32500,35834,36117,38597,39733,40048,41097,43310,44128,49129,50465,51358,53194,64322,64658,65742,66497,68254,69179,76558,78638,79357,81408,86268,86804,90070,90491,90956,
#Deleted in new
chr3_KN196475v1_fix	287070	378611	chr3_KN196475v1_fix:287070-378611	0	+	287215	303513	789624	34	164,184,77,38,98,180,210,126,123,124,77,210,178,142,142,198,108,106,166,151,86,70,87,105,123,147,102,165,110,73,38,166,132,589,	0,13533,16394,19164,23124,24674,32496,35830,36113,38593,39729,40044,41093,43306,44124,49125,50461,51354,53190,64318,64654,65738,66493,68250,69175,76554,78634,79353,81404,86264,86800,90066,90487,90952,
#Deleted in new
chr3_KN196475v1_fix	287211	352840	chr3_KN196475v1_fix:287211-352840	0	+	319611	352840	789624	18	23,38,210,126,123,124,77,210,178,142,142,198,108,106,166,151,86,32,	0,19023,32355,35689,35972,38452,39588,39903,40952,43165,43983,48984,50320,51213,53049,64177,64513,65597,
#Deleted in new
chr3_KN196475v1_fix	324536	378371	chr3_KN196475v1_fix:324536-378371	1	+	324638	378085	789624	26	105,124,77,210,178,142,142,198,108,106,166,151,86,70,87,105,123,147,102,165,110,73,38,166,132,349,	0,1127,2263,2578,3627,5840,6658,11659,12995,13888,15724,26852,27188,28272,29027,30784,31709,39088,41168,41887,43938,48798,49334,52600,53021,53486,
#Deleted in new
chr3_KN196475v1_fix	324562	338620	chr3_KN196475v1_fix:324562-338620	0	+	324562	324562	8553170	10	79,124,77,210,178,142,142,198,108,196,	0,1101,2237,2552,3601,5814,6632,11633,12969,13862,
#Deleted in new
chr3_KN196475v1_fix	340320	378604	chr3_KN196475v1_fix:340320-378604	0	+	340320	352388	789624	17	106,151,86,198,70,87,105,123,147,102,165,110,73,38,166,132,582,	0,11068,11404,12025,12488,13243,15000,15925,23304,25384,26103,28154,33014,33550,36816,37237,37702,
#Deleted in new
chr3_KN196475v1_fix	368472	398726	chr3_KN196475v1_fix:368472-398726	0	+	368472	378085	789624	7	112,73,38,166,132,122,48,	0,4862,5398,8664,9085,9550,30206,
#Deleted in new
chr3_KN196475v1_fix	387218	391020	chr3_KN196475v1_fix:387218-391020	3	+	387274	390530	789624	3	248,147,631,	0,2328,3171,
#Deleted in new
chr3_KN196475v1_fix	387237	387331	chr3_KN196475v1_fix:387237-387331	3	+	387237	387237	5263520	1	94,	0,
#Deleted in new
chr3_KN196475v1_fix	387253	391020	chr3_KN196475v1_fix:387253-391020	0	+	387253	387253	8553170	2	2440,631,	0,3136,
#Deleted in new
chr3_KN196475v1_fix	399957	414520	chr3_KN196475v1_fix:399957-414520	0	+	399957	399957	8553170	3	90,174,1482,	0,10717,13081,
#Deleted in new
chr3_KN196475v1_fix	399960	440340	chr3_KN196475v1_fix:399960-440340	3	+	400028	439075	789624	14	87,174,107,130,119,108,175,139,104,252,279,170,137,1407,	0,10714,13078,15992,18966,22098,26913,27182,29273,32338,35479,36347,36659,38973,
#Deleted in new
chr3_KN196475v1_fix	399972	401840	chr3_KN196475v1_fix:399972-401840	0	+	399972	399972	8553170	2	75,62,	0,1806,
#Deleted in new
chr3_KN196475v1_fix	399984	426920	chr3_KN196475v1_fix:399984-426920	0	+	400028	416035	789624	6	63,174,130,119,108,47,	0,10690,15968,18942,22074,26889,
#Deleted in new
chr3_KN196475v1_fix	415688	422089	chr3_KN196475v1_fix:415688-422089	0	+	415688	415688	8553170	3	394,119,31,	0,3238,6370,
#Deleted in new
chr3_KN196475v1_fix	424527	426275	chr3_KN196475v1_fix:424527-426275	3	+	424527	424527	8553170	2	472,97,	0,1651,
#Deleted in new
chr3_KN196475v1_fix	428884	432552	chr3_KN196475v1_fix:428884-432552	0	+	428884	428884	8553170	2	453,254,	0,3414,
#Deleted in new
chr3_KN196476v1_fix	109154	109314	chr3_KN196476v1_fix:109154-109314	3	+	109154	109154	8553170	1	160,	0,
#Deleted in new
chr3_KN196476v1_fix	126608	266435	chr3_KN196476v1_fix:126608-266435	7	-	126608	126608	16724991	7	231,69,83,127,187,73,68,	0,13725,42306,47545,109819,114931,139759,
#Deleted in new
chr3_KN538364v1_fix	52965	121861	chr3_KN538364v1_fix:52965-121861	1	-	52965	121861	8553170	6	250,99,170,7,126,32,	0,652,863,24007,67972,68864,
#Deleted in new
chr3_KN538364v1_fix	52965	121861	chr3_KN538364v1_fix:52965-121861	3	-	52965	121861	789624	6	250,99,170,7,126,32,	0,652,863,24007,67972,68864,
#Deleted in new
chr3_KN538364v1_fix	179634	225449	chr3_KN538364v1_fix:179634-225449	3	-	179634	179634	8553170	3	284,120,462,	0,44647,45353,
#Deleted in new
chr3_KN538364v1_fix	251599	251763	chr3_KN538364v1_fix:251599-251763	3	+	251599	251599	8553170	1	164,	0,
#Deleted in new
chr3_KN538364v1_fix	258278	258444	chr3_KN538364v1_fix:258278-258444	7	+	258278	258278	16724991	1	166,	0,
#Deleted in new
chr3_KN538364v1_fix	366613	366720	chr3_KN538364v1_fix:366613-366720	7	-	366613	366613	16724991	1	107,	0,
#Deleted in new
chr3_KQ031385v1_fix	110409	355823	chr3_KQ031385v1_fix:110409-355823	3	+	197990	354703	789624	11	375,386,157,110,105,48,45,70,65,74,1238,	0,87228,103030,109689,128537,129818,212850,229346,235964,237015,244176,
#Deleted in new
chr3_KQ031385v1_fix	197907	354975	chr3_KQ031385v1_fix:197907-354975	1	+	220172	354703	789624	9	116,110,105,48,45,70,65,74,390,	0,22191,41039,42320,125352,141848,148466,149517,156678,
#Deleted in new
chr3_KQ031385v1_fix	197959	365012	chr3_KQ031385v1_fix:197959-365012	0	+	220172	332953	789624	13	64,110,105,48,45,54,70,65,74,381,93,837,1933,	0,22139,40987,42268,125300,134967,141796,148414,149465,156626,157346,159053,165120,
#Deleted in new
chr3_KQ031385v1_fix	220098	355823	chr3_KQ031385v1_fix:220098-355823	0	+	220098	281360	789624	9	110,105,48,85,45,70,65,74,1238,	0,18848,20129,61250,103161,119657,126275,127326,134487,
#Deleted in new
chr3_KQ031385v1_fix	220098	354952	chr3_KQ031385v1_fix:220098-354952	1	+	220172	348287	789624	9	110,105,48,45,70,65,74,212,367,	0,18848,20129,103161,119657,126275,127326,127999,134487,
#Deleted in new
chr3_KQ031385v1_fix	238490	347480	chr3_KQ031385v1_fix:238490-347480	0	+	238490	238490	8553170	6	56,105,48,45,65,56,	0,456,1737,84769,107883,108934,
#Deleted in new
chr3_KQ031385v1_fix	270009	270116	chr3_KQ031385v1_fix:270009-270116	3	-	270009	270009	8553170	1	107,	0,
#Deleted in new
chr3_KQ031385v1_fix	300750	301048	chr3_KQ031385v1_fix:300750-301048	3	+	300750	300750	8553170	1	298,	0,
#Deleted in new
chr3_KV766192v1_fix	475	9969	chr3_KV766192v1_fix:475-9969	3	-	475	475	8553170	3	226,84,101,	0,4303,9393,
#Deleted in new
chr3_KV766192v1_fix	5234	6692	chr3_KV766192v1_fix:5234-6692	7	-	5234	5234	16724991	1	1458,	0,
#Deleted in new
chr3_KV766192v1_fix	115140	323552	chr3_KV766192v1_fix:115140-323552	2	+	115140	115140	8553170	3	438,413,180,	0,207001,208232,
#Deleted in new
chr3_KV766192v1_fix	197433	403062	chr3_KV766192v1_fix:197433-403062	1	+	197514	402380	789624	6	408,2487,204,76,110,862,	0,124708,129742,157908,182990,204767,
#Deleted in new
chr3_KV766192v1_fix	245557	403061	chr3_KV766192v1_fix:245557-403061	1	+	322192	402380	789624	6	202,2487,204,76,110,861,	0,76584,81618,109784,134866,156643,
#Deleted in new
chr3_KV766192v1_fix	245663	245728	chr3_KV766192v1_fix:245663-245728	3	+	245663	245663	5263520	1	65,	0,
#Deleted in new
chr3_KV766192v1_fix	292000	292372	chr3_KV766192v1_fix:292000-292372	3	+	292000	292372	8553170	1	372,	0,
#Deleted in new
chr3_KV766192v1_fix	292000	292372	chr3_KV766192v1_fix:292000-292372	1	+	292000	292372	8553170	1	372,	0,
#Deleted in new
chr3_KV766192v1_fix	322961	394014	chr3_KV766192v1_fix:322961-394014	0	+	322961	393712	8553170	5	1667,204,76,110,359,	0,4214,32380,57462,70694,
#Deleted in new
chr3_KV766192v1_fix	355209	356660	chr3_KV766192v1_fix:355209-356660	3	-	355209	355209	8553170	2	172,139,	0,1312,
#Deleted in new
chr3_KZ208909v1_alt	84968	93408	chr3_KZ208909v1_alt:84968-93408	3	+	84968	84968	789624	3	188,34,138,	0,7992,8302,
#Deleted in new
chr3_KZ559102v1_alt	36335	36417	chr3_KZ559102v1_alt:36335-36417	3	+	36335	36335	8553170	1	82,	0,
#Deleted in new
chr3_KZ559102v1_alt	70758	70860	chr3_KZ559102v1_alt:70758-70860	3	-	70758	70758	8553170	1	102,	0,
#Deleted in new
chr3_KZ559103v1_alt	11105	11208	chr3_KZ559103v1_alt:11105-11208	3	-	11105	11105	8553170	1	103,	0,
#Deleted in new
chr3_KZ559103v1_alt	22549	277765	chr3_KZ559103v1_alt:22549-277765	3	+	22603	277378	0	7	370,208,97,165,657,157,578,	0,93384,108678,111167,187802,204786,254638,
#Deleted in new
chr3_KZ559103v1_alt	22596	277761	chr3_KZ559103v1_alt:22596-277761	1	+	22603	277220	789624	5	323,208,97,657,574,	0,93337,108631,187755,254591,
#Deleted in new
chr3_KZ559103v1_alt	22763	210627	chr3_KZ559103v1_alt:22763-210627	0	+	22763	22763	8553170	3	156,208,276,	0,93170,187588,
#Deleted in new
chr3_KZ559103v1_alt	50507	63551	chr3_KZ559103v1_alt:50507-63551	3	-	50507	50507	8553170	2	325,371,	0,12673,
#Deleted in new
chr3_KZ559103v1_alt	206022	210907	chr3_KZ559103v1_alt:206022-210907	0	+	206022	206022	8553170	2	189,556,	0,4329,
#Deleted in new
chr3_KZ559104v1_fix	43649	44010	chr3_KZ559104v1_fix:43649-44010	7	-	43649	43649	16724991	1	361,	0,
#Deleted in new
chr3_KZ559104v1_fix	44975	45914	chr3_KZ559104v1_fix:44975-45914	7	-	44975	44975	16724991	1	939,	0,
#Deleted in new
chr3_KZ559105v1_alt	4130	16595	chr3_KZ559105v1_alt:4130-16595	3	-	6744	16410	789624	6	2932,29,47,45,69,214,	0,4385,6146,7176,9604,12251,
#Deleted in new
chr3_KZ559105v1_alt	6385	16544	chr3_KZ559105v1_alt:6385-16544	1	-	6744	16410	789624	6	677,29,47,45,75,163,	0,2130,3891,4921,7349,9996,
#Deleted in new
chr3_KZ559105v1_alt	6514	16548	chr3_KZ559105v1_alt:6514-16548	0	-	11472	16410	789624	6	548,29,47,212,69,167,	0,2001,3762,4792,7220,9867,
#Deleted in new
chr3_KZ559105v1_alt	6594	16456	chr3_KZ559105v1_alt:6594-16456	0	-	11472	16410	789624	5	468,47,212,69,75,	0,3682,4712,7140,9787,
#Deleted in new
chr3_KZ559105v1_alt	6744	16541	chr3_KZ559105v1_alt:6744-16541	1	-	6744	16410	789624	5	318,29,47,69,160,	0,1771,3532,6990,9637,
#Deleted in new
chr3_KZ559105v1_alt	6850	16515	chr3_KZ559105v1_alt:6850-16515	0	-	6850	13781	789624	7	212,29,47,45,75,274,134,	0,1665,3426,4456,6884,9076,9531,
#Deleted in new
chr3_KZ559105v1_alt	6896	16560	chr3_KZ559105v1_alt:6896-16560	0	-	6896	13781	789624	7	166,29,47,45,69,274,179,	0,1619,3380,4410,6838,9030,9485,
#Deleted in new
chr3_KZ559105v1_alt	16712	18649	chr3_KZ559105v1_alt:16712-18649	3	+	16712	16712	8553170	1	1937,	0,
#Deleted in new
chr3_KZ559105v1_alt	24176	186996	chr3_KZ559105v1_alt:24176-186996	3	-	24561	179529	789624	29	395,107,53,127,186,132,171,99,126,149,52,150,186,196,120,98,126,167,82,175,144,103,162,129,166,129,101,175,166,	0,10970,14108,35819,37475,37795,48105,49138,50705,67882,69272,70811,72779,76739,86003,89689,99922,108401,112556,131485,132761,134799,138477,143458,146256,147290,149244,155265,162654,
#Deleted in new
chr3_KZ559105v1_alt	24194	186965	chr3_KZ559105v1_alt:24194-186965	1	-	24561	179529	789624	28	377,107,53,127,186,132,171,99,126,149,52,150,186,196,120,98,126,167,82,175,103,162,129,166,129,101,175,135,	0,10952,14090,35801,37457,37777,48087,49120,50687,67864,69254,70793,72761,76721,85985,89671,99904,108383,112538,131467,134781,138459,143440,146238,147272,149226,155247,162636,
#Deleted in new
chr3_KZ559105v1_alt	24505	179617	chr3_KZ559105v1_alt:24505-179617	0	-	132734	179529	789624	22	66,107,53,127,186,132,171,99,126,149,52,150,120,98,126,167,103,129,166,129,101,176,	0,10641,13779,35490,37146,37466,47776,48809,50376,67553,68943,70482,85674,89360,99593,108072,134470,143129,145927,146961,148915,154936,
#Deleted in new
chr3_KZ559105v1_alt	44824	45657	chr3_KZ559105v1_alt:44824-45657	7	-	44824	44824	16724991	2	237,591,	0,242,
#Deleted in new
chr3_KZ559105v1_alt	78217	78736	chr3_KZ559105v1_alt:78217-78736	7	-	78217	78217	16724991	1	519,	0,
#Deleted in new
chr3_KZ559105v1_alt	170442	186965	chr3_KZ559105v1_alt:170442-186965	0	-	170442	171565	789624	4	156,129,101,135,	0,1024,2978,16388,
#Deleted in new
chr3_KZ559105v1_alt	171505	186954	chr3_KZ559105v1_alt:171505-186954	0	-	171505	171505	8553170	4	167,101,175,124,	0,1915,7936,15325,
#Deleted in new
chr4	49095	49956	chr4:49095-49956	7	-	49095	49095	16724991	1	861,	0,
#Deleted in new
chr4	49553	50124	chr4:49553-50124	5	-	49553	49553	16724991	1	571,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	53284	88211	chr4:53284-88211	3	+	53488	87451	789624	4	207,127,96,2481,	0,6145,6773,32446,
#Partially deleted in new
chr4	53285	87523	chr4:53285-87523	1	+	86053	87451	789624	2	206,1793,	0,32445,
#Partially deleted in new
chr4	53294	87521	chr4:53294-87521	1	+	53488	87451	789624	3	197,127,1791,	0,6135,32436,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	53303	68500	chr4:53303-68500	1	+	53488	67871	789624	4	188,127,96,661,	0,6126,6754,14536,
#Partially deleted in new
chr4	53328	60514	chr4:53328-60514	0	+	53328	53328	8553170	3	163,127,457,	0,6101,6729,
#Deleted in new
chr4	105958	107114	chr4:105958-107114	7	-	105958	105958	16724991	1	1156,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	124479	163989	chr4:124479-163989	3	+	124670	162122	789624	4	194,127,96,3078,	0,6308,6930,36432,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	124500	202303	chr4:124500-202303	0	+	124670	201109	789624	5	173,127,96,131,672,	0,6287,6909,76580,77131,
#Partially deleted in new
chr4	124537	162701	chr4:124537-162701	1	+	130880	162122	789624	4	759,127,96,1790,	0,6250,6872,36374,
#Deleted in new
chr4	149737	150317	chr4:149737-150317	3	+	149737	149737	8553170	1	580,	0,
#Partially deleted in new
chr4	201408	205009	chr4:201408-205009	7	-	201408	201408	16724991	2	580,370,	0,3231,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	212609	255985	chr4:212609-255985	7	+	212609	212609	16724991	2	172,2426,	0,40950,
#Partially deleted in new
chr4	218649	254841	chr4:218649-254841	5	+	218649	218649	16724991	3	127,79,1279,	0,657,34913,
#Deleted in new
chr4	268981	269531	chr4:268981-269531	7	-	268981	268981	16724991	1	550,	0,
#Deleted in new
chr4	269865	270175	chr4:269865-270175	7	-	269865	269865	16724991	1	310,	0,
#Partially deleted in new
chr4	270674	305321	chr4:270674-305321	3	-	271098	305310	789624	4	1956,96,127,14,	0,24763,25354,34633,
#Partially deleted in new
chr4	270674	296155	chr4:270674-296155	1	-	271098	296155	789624	3	1956,96,127,	0,24763,25354,
#Deleted in new
chr4	336257	336786	chr4:336257-336786	7	-	336257	336257	16724991	1	529,	0,
#Partially deleted in new
chr4	337813	373026	chr4:337813-373026	0	+	337813	337813	8553170	2	173,363,	0,34850,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	337819	383971	chr4:337819-383971	1	+	337983	383130	789624	5	167,127,96,344,877,	0,5962,6515,34844,45275,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	337832	358550	chr4:337832-358550	0	+	337832	337832	8553170	4	154,127,96,343,	0,5949,6502,20375,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	337833	384864	chr4:337833-384864	1	+	337983	383210	789624	4	153,127,96,1770,	0,5948,6501,45261,
#Partially deleted in new
chr4	337834	375258	chr4:337834-375258	3	+	337983	373862	789624	4	152,127,96,2595,	0,5947,6500,34829,
#Deleted in new
chr4	338096	338583	chr4:338096-338583	7	-	338096	338096	16724991	1	487,	0,
#Deleted in new
chr4	342820	342962	chr4:342820-342962	7	-	342820	342820	16724991	1	142,	0,
#Deleted in new
chr4	350156	350252	chr4:350156-350252	3	+	350156	350156	789624	1	96,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	378038	383268	chr4:378038-383268	0	+	378038	378038	8553170	2	166,648,	0,4582,
#Deleted in new
chr4	393533	393658	chr4:393533-393658	7	+	393533	393533	16724991	1	125,	0,
#Deleted in new
chr4	416117	416537	chr4:416117-416537	3	-	416117	416117	8553170	1	420,	0,
#Partially deleted in new
chr4	425434	474129	chr4:425434-474129	7	-	425434	425434	16724991	3	1539,127,149,	0,47140,48546,
#Deleted in new
chr4	425772	427882	chr4:425772-427882	5	-	425772	425772	16724991	1	2110,	0,
#Partially deleted in new
chr4	425814	474051	chr4:425814-474051	4	-	425814	425814	16724991	3	1305,127,71,	0,46760,48166,
#Partially deleted in new
chr4	425814	474051	chr4:425814-474051	4	-	425814	425814	16724991	4	1159,66,127,71,	0,11631,46760,48166,
#Partially deleted in new
chr4	425814	474051	chr4:425814-474051	0	-	437455	473983	789624	5	1305,110,66,127,71,	0,9955,11631,46760,48166,
#Partially deleted in new
chr4	426788	474142	chr4:426788-474142	1	-	435815	473983	789624	7	331,110,66,49,90,127,162,	0,8981,10657,11795,17554,45786,47192,
#Partially deleted in new
chr4	435769	474098	chr4:435769-474098	0	-	435769	435769	8553170	3	110,127,118,	0,36805,38211,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	439987	499102	chr4:439987-499102	1	-	441694	444430	789624	2	4445,47,	0,59068,
#Partially deleted in new
chr4	441694	499156	chr4:441694-499156	3	-	441694	472608	789624	3	2738,127,101,	0,30880,57361,
#Partially deleted in new
chr4	444082	474167	chr4:444082-474167	0	-	444082	473983	789624	3	350,127,187,	0,28492,29898,
#Partially deleted in new
chr4	499209	521961	chr4:499209-521961	0	+	499335	505848	789624	9	280,206,70,210,189,142,213,172,302,	0,1186,1891,6508,8195,9619,16763,21846,22450,
#Partially deleted in new
chr4	499220	539529	chr4:499220-539529	3	+	499335	539369	789624	13	269,206,210,189,142,213,194,282,455,192,310,164,377,	0,1175,6497,8184,9608,16752,21835,22439,24238,27818,31215,34597,39932,
#Partially deleted in new
chr4	499229	539529	chr4:499229-539529	1	+	499335	539369	789624	13	260,206,210,189,142,213,218,282,455,192,310,164,377,	0,1166,6488,8175,9599,16743,21826,22430,24229,27809,31206,34588,39923,
#Partially deleted in new
chr4	499236	539528	chr4:499236-539528	1	+	500508	539369	789624	13	62,206,210,189,142,213,218,282,455,192,310,164,376,	0,1159,6481,8168,9592,16736,21819,22423,24222,27802,31199,34581,39916,
#Deleted in new
chr4	499239	502329	chr4:499239-502329	0	+	499239	499239	8553170	3	250,206,733,	0,1156,2357,
#Partially deleted in new
chr4	499239	522842	chr4:499239-522842	1	+	500508	521712	789624	7	486,206,210,189,142,213,1183,	0,1156,6478,8165,9589,16733,22420,
#Partially deleted in new
chr4	499242	507538	chr4:499242-507538	0	+	499335	506772	789624	5	247,206,210,106,134,	0,1153,6475,7518,8162,
#Partially deleted in new
chr4	499257	539525	chr4:499257-539525	1	+	499335	539369	789624	11	232,206,142,213,218,282,455,192,310,164,373,	0,1138,9571,16715,21798,22402,24201,27781,31178,34560,39895,
#Partially deleted in new
chr4	499257	522837	chr4:499257-522837	0	+	499335	521765	789624	9	232,206,210,189,142,213,172,193,830,	0,1138,6460,8147,9571,16715,21798,22402,22750,
#Partially deleted in new
chr4	499288	522843	chr4:499288-522843	1	+	500508	522037	789624	8	759,206,210,189,142,213,218,1184,	0,1107,6429,8116,9540,16684,21767,22371,
#Deleted in new
chr4	499353	501171	chr4:499353-501171	0	+	499353	499353	8553170	3	372,140,71,	0,1108,1747,
#Partially deleted in new
chr4	516069	522223	chr4:516069-522223	0	+	516069	516069	8553170	4	116,218,282,216,	0,4986,5590,5938,
#Deleted in new
chr4	521050	522313	chr4:521050-522313	0	+	521050	521050	8553170	3	199,282,287,	0,609,976,
#Deleted in new
chr4	521756	522365	chr4:521756-522365	0	+	521756	521756	8553170	2	185,377,	0,232,
#Partially deleted in new
chr4	521889	530498	chr4:521889-530498	0	+	521889	521889	8553170	3	52,455,63,	0,1569,8546,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	523519	524911	chr4:523519-524911	0	+	523519	523519	8553170	2	394,352,	0,1040,
#Partially deleted in new
chr4	523831	527540	chr4:523831-527540	0	+	523831	523831	8553170	2	82,502,	0,3207,
#Partially deleted in new
chr4	525364	533981	chr4:525364-533981	0	+	525364	525364	8553170	3	270,192,164,	0,1674,8453,
#Partially deleted in new
chr4	525567	530725	chr4:525567-530725	0	+	530652	530725	789624	3	270,192,290,	0,1471,4868,
#Deleted in new
chr4	526949	539365	chr4:526949-539365	0	+	526949	526949	8553170	3	281,164,213,	0,6868,12203,
#Deleted in new
chr4	530839	539529	chr4:530839-539529	0	+	530839	530839	8553170	2	3142,377,	0,8313,
#Deleted in new
chr4	532113	539525	chr4:532113-539525	0	+	532113	532113	8553170	2	1868,373,	0,7039,
#Deleted in new
chr4	532713	536314	chr4:532713-536314	0	+	532713	532713	8553170	4	107,118,164,56,	0,387,1104,3545,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	533631	540196	chr4:533631-540196	0	+	533631	533631	8553170	2	350,1044,	0,5521,
#Deleted in new
chr4	536704	539529	chr4:536704-539529	0	+	536704	536704	8553170	2	284,377,	0,2448,
#Deleted in new
chr4	537290	539523	chr4:537290-539523	0	+	537290	537290	8553170	2	73,371,	0,1862,
#Deleted in new
chr4	573879	576300	chr4:573879-576300	3	-	574904	576062	789624	1	2421,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	577167	584866	chr4:577167-584866	3	+	577167	577167	789624	3	1152,114,588,	0,1552,7111,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr4	625583	670782	chr4:625583-670782	1	+	625626	670107	789624	22	511,153,90,141,75,65,67,48,150,144,66,147,108,110,88,101,108,64,75,84,151,734,	0,9093,10296,28268,28496,29240,30356,30661,31290,31767,33368,34883,36550,36925,37516,38186,38530,39297,39671,40947,42272,44465,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr4	625605	670753	chr4:625605-670753	3	+	625626	670107	789624	22	489,153,90,141,75,65,67,48,150,144,66,147,108,110,88,101,108,64,75,84,151,708,	0,9071,10274,28246,28474,29218,30334,30639,31268,31745,33346,34861,36528,36903,37494,38164,38508,39275,39649,40925,42250,44440,
#Deleted in new
chr4	651558	654858	chr4:651558-654858	0	+	653977	654858	789624	4	199,141,75,35,	0,2293,2521,3265,
#Deleted in new
chr4	651984	654288	chr4:651984-654288	0	+	651984	651984	8553170	4	104,58,141,209,	0,511,1867,2095,
#Partially deleted in new
chr4	651984	656943	chr4:651984-656943	0	+	653977	656943	789624	6	104,141,75,65,67,70,	0,1867,2095,2839,3955,4889,
#Deleted in new
chr4	652272	654669	chr4:652272-654669	0	+	652272	652272	8553170	3	281,141,590,	0,1579,1807,
#Deleted in new
chr4	652849	653260	chr4:652849-653260	0	-	652849	652849	8553170	1	411,	0,
#Deleted in new
chr4	652954	653789	chr4:652954-653789	0	-	652954	652954	8553170	2	605,32,	0,803,
#Deleted in new
chr4	653058	656213	chr4:653058-656213	3	-	653058	653058	8553170	4	625,214,149,1132,	0,699,1006,2023,
#Deleted in new
chr4	653176	654084	chr4:653176-654084	0	+	653977	654084	8553170	4	143,271,141,5,	0,260,675,903,
#Partially deleted in new
chr4	653179	670233	chr4:653179-670233	1	+	653977	670107	789624	20	140,141,75,65,67,48,150,144,66,147,108,110,88,101,108,64,75,84,151,188,	0,672,900,1644,2760,3065,3694,4171,5772,7287,8954,9329,9920,10590,10934,11701,12075,13351,14676,16866,
#Deleted in new
chr4	653210	654374	chr4:653210-654374	0	+	653210	653210	8553170	3	109,141,295,	0,641,869,
#Deleted in new
chr4	653733	655477	chr4:653733-655477	0	-	653733	653733	8553170	2	238,396,	0,1348,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	661208	661945	chr4:661208-661945	3	-	661208	661208	8553170	1	737,	0,
#Partially deleted in new
chr4	663722	664922	chr4:663722-664922	0	+	663722	663722	8553170	2	499,42,	0,1158,
#Partially deleted in new
chr4	663769	670193	chr4:663769-670193	0	+	663769	670048	789624	6	101,108,64,75,84,148,	0,344,1111,1485,2761,6276,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	664909	670314	chr4:664909-670314	0	+	664909	670214	789624	5	35,75,84,86,269,	0,345,1621,2946,5136,
#Partially deleted in new
chr4	672435	674338	chr4:672435-674338	3	-	672499	674247	789624	4	84,99,55,127,	0,867,1476,1776,
#Partially deleted in new
chr4	672435	674121	chr4:672435-674121	0	-	672435	672435	8553170	3	84,99,210,	0,867,1476,
#Partially deleted in new
chr4	672437	674330	chr4:672437-674330	0	-	672437	672437	789624	3	82,99,119,	0,865,1774,
#Partially deleted in new
chr4	672437	673821	chr4:672437-673821	0	-	672437	672437	8553170	3	82,99,315,	0,865,1069,
#Partially deleted in new
chr4	672493	673523	chr4:672493-673523	0	-	672493	672493	8553170	2	26,221,	0,809,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	673579	682027	chr4:673579-682027	1	+	678969	681994	789624	8	2275,137,100,76,105,79,49,135,	0,2493,5086,5378,6334,6929,7512,8313,
#Partially deleted in new
chr4	673940	682022	chr4:673940-682022	1	+	678969	681994	789624	7	37,108,76,105,79,49,130,	0,4717,5017,5973,6568,7151,7952,
#Partially deleted in new
chr4	674502	682027	chr4:674502-682027	0	+	678969	679164	789624	8	951,137,108,216,105,79,49,135,	0,1570,4155,4455,5411,6006,6589,7390,
#Partially deleted in new
chr4	674541	676481	chr4:674541-676481	0	+	674541	674541	8553170	2	142,409,	0,1531,
#Partially deleted in new
chr4	674559	682028	chr4:674559-682028	1	+	678969	681994	789624	7	228,108,76,105,79,49,136,	0,4098,4398,5354,5949,6532,7333,
#Deleted in new
chr4	677921	682033	chr4:677921-682033	3	+	678026	681994	789624	7	108,108,76,105,79,49,141,	0,736,1036,1992,2587,3170,3971,
#Deleted in new
chr4	677953	681990	chr4:677953-681990	0	+	678026	679164	789624	7	76,108,216,105,79,49,98,	0,704,1004,1960,2555,3138,3939,
#Deleted in new
chr4	678188	680579	chr4:678188-680579	0	+	678639	680579	789624	4	577,76,105,71,	0,769,1725,2320,
#Deleted in new
chr4	680745	682028	chr4:680745-682028	0	+	680745	680745	8553170	2	395,136,	0,1147,
#Partially deleted in new
chr4	681828	689441	chr4:681828-689441	3	-	681957	689127	789624	10	548,110,158,153,117,138,77,214,159,449,	0,952,1381,1780,2654,2890,4006,4260,4703,7164,
#Partially deleted in new
chr4	681828	689271	chr4:681828-689271	1	-	681957	689127	789624	8	548,110,158,153,120,138,93,279,	0,952,1381,1780,2654,2890,4703,7164,
#Deleted in new
chr4	681828	685101	chr4:681828-685101	0	-	681828	681828	8553170	6	548,110,158,153,120,383,	0,952,1381,1780,2654,2890,
#Partially deleted in new
chr4	681830	689143	chr4:681830-689143	1	-	681957	689127	789624	10	546,110,158,153,120,138,77,214,159,151,	0,950,1379,1778,2652,2888,4004,4258,4701,7162,
#Partially deleted in new
chr4	681857	689191	chr4:681857-689191	1	-	681957	689127	789624	8	519,110,158,153,120,138,159,199,	0,923,1352,1751,2625,2861,4674,7135,
#Partially deleted in new
chr4	681861	687325	chr4:681861-687325	1	-	682142	686633	789624	10	475,110,158,153,117,138,77,214,159,31,	0,919,1348,1747,2621,2857,3973,4227,4670,5433,
#Partially deleted in new
chr4	683217	689183	chr4:683217-689183	0	-	683217	689127	789624	4	150,153,159,191,	0,391,3314,5775,
#Partially deleted in new
chr4	684482	688980	chr4:684482-688980	0	-	684482	686633	789624	7	120,138,77,214,159,148,82,	0,236,1352,1606,2049,3426,4416,
#Deleted in new
chr4	686088	689023	chr4:686088-689023	0	-	686088	686088	8553170	4	66,159,148,125,	0,443,1820,2810,
#Partially deleted in new
chr4	705747	734943	chr4:705747-734943	0	+	733680	734943	789624	6	223,39,141,55,118,13,	0,24882,25222,26696,27924,29183,
#Partially deleted in new
chr4	705764	770640	chr4:705764-770640	3	+	733680	766079	789624	11	206,39,141,118,97,56,111,89,138,81,4609,	0,24865,25205,27907,29166,31701,37709,38835,55514,59219,60267,
#Partially deleted in new
chr4	705781	731345	chr4:705781-731345	0	+	705781	705781	8553170	3	189,39,376,	0,24848,25188,
#Partially deleted in new
chr4	705783	734479	chr4:705783-734479	1	+	733680	734202	789624	4	187,39,141,808,	0,24846,25186,27888,
#Partially deleted in new
chr4	705783	735009	chr4:705783-735009	0	+	733680	735009	789624	5	187,39,159,118,79,	0,24846,25168,27888,29147,
#Partially deleted in new
chr4	705783	766608	chr4:705783-766608	1	+	733680	766079	789624	11	187,39,159,118,97,56,111,89,138,81,577,	0,24846,25168,27888,29147,31682,37690,38816,55495,59200,60248,
#Partially deleted in new
chr4	705783	734842	chr4:705783-734842	0	+	705783	705783	8553170	5	187,39,141,118,53,	0,24846,25186,27888,29006,
#Partially deleted in new
chr4	705831	766599	chr4:705831-766599	0	+	733680	734119	789624	11	139,39,141,118,1144,56,111,89,138,81,565,	0,24798,25138,27840,28052,31634,37642,38768,55447,59152,60203,
#Partially deleted in new
chr4	705874	737540	chr4:705874-737540	0	+	705874	705874	8553170	6	96,39,141,118,97,75,	0,24755,25095,27797,29056,31591,
#Partially deleted in new
chr4	705942	767864	chr4:705942-767864	0	+	733680	734119	789624	13	28,39,141,99,118,1144,56,111,89,138,81,374,1191,	0,24687,25027,26457,27729,27941,31523,37531,38657,55336,59041,60089,60731,
#Deleted in new
chr4	722274	724034	chr4:722274-724034	3	-	722274	722274	8553170	2	163,406,	0,1354,
#Partially deleted in new
chr4	725106	743538	chr4:725106-743538	0	+	733680	743538	789624	7	123,39,141,118,97,56,65,	0,5523,5863,8565,9824,12359,18367,
#Partially deleted in new
chr4	743864	761364	chr4:743864-761364	0	+	743864	743864	8553170	3	88,89,86,	0,735,17414,
#Deleted in new
chr4	757021	757740	chr4:757021-757740	3	-	757021	757021	8553170	1	719,	0,
#Partially deleted in new
chr4	762386	781849	chr4:762386-781849	3	-	762386	762386	8553170	2	453,78,	0,19385,
#Deleted in new
chr4	764486	765074	chr4:764486-765074	3	-	764486	764486	8553170	2	123,163,	0,425,
#Partially deleted in new
chr4	767140	781830	chr4:767140-781830	1	-	767140	767140	8553170	2	475,59,	0,14631,
#Deleted in new
chr4	768188	770087	chr4:768188-770087	1	+	768975	769374	789624	1	1899,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	780148	781849	chr4:780148-781849	1	-	780148	780148	789624	2	540,78,	0,1623,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	780245	781849	chr4:780245-781849	1	-	780245	780245	8553170	2	472,78,	0,1526,
#Partially deleted in new
chr4	784956	826198	chr4:784956-826198	3	-	786500	824522	0	4	1742,176,110,153,	0,7476,39535,41089,
#Partially deleted in new
chr4	784957	826092	chr4:784957-826092	1	-	786500	824522	789624	5	1741,15,98,110,47,	0,7475,7553,39534,41088,
#Deleted in new
chr4	786389	792692	chr4:786389-792692	0	-	786389	786389	8553170	2	309,260,	0,6043,
#Partially deleted in new
chr4	786530	804908	chr4:786530-804908	0	-	786530	792594	789624	3	168,176,153,	0,5902,18225,
#Deleted in new
chr4	836511	837224	chr4:836511-837224	3	-	836511	836511	8553170	1	713,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	849275	851673	chr4:849275-851673	0	-	849275	849275	8553170	2	499,1782,	0,616,
#Partially deleted in new
chr4	849276	851921	chr4:849276-851921	0	-	850979	851921	789624	4	498,177,82,172,	0,615,1659,2473,
#Partially deleted in new
chr4	849277	932298	chr4:849277-932298	3	-	849672	932187	0	28	497,177,149,225,117,123,171,477,147,194,80,118,195,134,123,149,50,124,91,113,136,90,126,143,115,60,62,256,	0,614,1658,2472,10328,15844,17086,17678,19261,21433,27252,27812,28337,32629,33419,34037,34759,39569,41254,44099,44596,47182,48755,55359,62395,63457,64329,82765,
#Partially deleted in new
chr4	849277	872773	chr4:849277-872773	0	-	849277	849277	8553170	11	497,518,149,225,117,123,171,477,147,194,508,	0,614,1658,2472,10328,15844,17086,17678,19261,21433,22988,
#Partially deleted in new
chr4	849277	932373	chr4:849277-932373	1	-	849672	932187	0	25	497,177,149,225,117,123,171,477,147,194,80,118,195,134,123,149,50,124,91,113,136,90,126,143,331,	0,614,1658,2472,10328,15844,17086,17678,19261,21433,27252,27812,28337,32629,33419,34037,34759,39569,41254,44099,44596,47182,48755,55359,82765,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	849277	853828	chr4:849277-853828	0	-	849277	849277	8553170	3	497,177,2893,	0,614,1658,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	849277	869957	chr4:849277-869957	0	-	849277	849277	8553170	7	497,177,1039,123,171,477,1419,	0,614,1658,15844,17086,17678,19261,
#Partially deleted in new
chr4	849307	867162	chr4:849307-867162	0	-	849672	867162	789624	9	467,177,149,225,132,117,123,171,207,	0,584,1628,2442,10054,10298,15814,17056,17648,
#Partially deleted in new
chr4	849675	932187	chr4:849675-932187	1	-	849675	932187	789624	9	99,177,149,225,117,123,171,70,117,	0,216,1260,2074,9930,15446,16688,17280,82395,
#Partially deleted in new
chr4	851852	867218	chr4:851852-867218	0	-	851852	867218	789624	5	122,117,123,138,263,	0,7753,13269,14511,15103,
#Deleted in new
chr4	882767	884390	chr4:882767-884390	0	-	882767	882767	8553170	3	52,149,354,	0,547,1269,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	885782	894827	chr4:885782-894827	0	-	885782	885782	8553170	4	3188,91,113,954,	0,4749,7594,8091,
#Partially deleted in new
chr4	893418	932365	chr4:893418-932365	0	-	912084	932187	789624	10	71,136,90,126,143,170,145,60,62,323,	0,455,3041,4614,11218,18254,18611,19316,20188,38624,
#Partially deleted in new
chr4	893942	932317	chr4:893942-932317	0	-	898153	932187	789624	3	67,126,275,	0,4090,38100,
#Partially deleted in new
chr4	896468	932327	chr4:896468-932327	0	-	896468	932187	789624	4	81,126,62,285,	0,1564,17138,35574,
#Partially deleted in new
chr4	897975	904781	chr4:897975-904781	0	-	897975	897975	8553170	2	183,145,	0,6661,
#Partially deleted in new
chr4	898061	932317	chr4:898061-932317	0	-	904758	932187	789624	4	97,143,62,275,	0,6575,15545,33981,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	904652	915756	chr4:904652-915756	0	-	904652	904652	8553170	5	122,115,60,62,259,	0,7020,8082,8954,10845,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	904686	915735	chr4:904686-915735	0	-	904686	912737	789624	5	93,115,60,62,238,	0,6986,8048,8920,10811,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	911672	915678	chr4:911672-915678	0	-	911672	911672	8553170	4	170,145,62,181,	0,357,1934,3825,
#Deleted in new
chr4	911718	914029	chr4:911718-914029	0	-	911718	911718	8553170	3	69,60,423,	0,1016,1888,
#Partially deleted in new
chr4	912084	932327	chr4:912084-932327	1	-	912084	932187	789624	4	90,60,62,285,	0,650,1522,19958,
#Partially deleted in new
chr4	912461	932220	chr4:912461-932220	0	-	912461	912461	8553170	3	333,62,178,	0,1145,19581,
#Partially deleted in new
chr4	932386	958656	chr4:932386-958656	3	+	947739	958496	789624	11	154,184,39,98,52,36,84,165,79,136,833,	0,15322,15729,18034,18820,19295,19980,20803,23018,23368,25437,
#Partially deleted in new
chr4	932386	951259	chr4:932386-951259	0	+	947739	951259	789624	5	154,184,39,95,53,	0,15322,15729,18037,18820,
#Partially deleted in new
chr4	932403	958656	chr4:932403-958656	0	+	947739	948437	789624	12	137,184,39,205,98,52,72,84,165,79,136,833,	0,15305,15712,16007,18017,18803,19242,19963,20786,23001,23351,25420,
#Partially deleted in new
chr4	932425	953303	chr4:932425-953303	0	+	947739	953303	789624	7	115,184,98,52,36,84,114,	0,15283,17995,18781,19256,19941,20764,
#Partially deleted in new
chr4	932431	948589	chr4:932431-948589	0	+	932431	932431	8553170	2	109,881,	0,15277,
#Partially deleted in new
chr4	932443	957863	chr4:932443-957863	0	+	950474	957863	789624	9	97,95,52,36,84,165,79,136,40,	0,17980,18763,19238,19923,20746,22961,23311,25380,
#Partially deleted in new
chr4	932445	952436	chr4:932445-952436	0	+	947739	948437	789624	8	95,184,39,205,95,52,36,70,	0,15263,15670,15965,17978,18761,19236,19921,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	932459	956892	chr4:932459-956892	0	+	932459	932459	8553170	11	81,184,500,98,52,36,84,165,79,136,596,	0,15249,15656,17961,18747,19222,19907,20730,22945,23295,23837,
#Partially deleted in new
chr4	932459	955816	chr4:932459-955816	0	+	950474	955816	789624	7	81,98,52,84,165,79,62,	0,17961,18747,19907,20730,22945,23295,
#Partially deleted in new
chr4	932460	955944	chr4:932460-955944	0	+	932460	932460	8553170	10	80,184,39,98,52,36,84,165,79,190,	0,15248,15655,17960,18746,19221,19906,20729,22944,23294,
#Partially deleted in new
chr4	932461	951705	chr4:932461-951705	0	+	947739	948552	789624	7	79,184,39,105,98,52,24,	0,15247,15654,16049,17959,18745,19220,
#Partially deleted in new
chr4	932464	958575	chr4:932464-958575	1	+	951687	958496	789624	9	76,98,52,72,84,165,79,136,752,	0,17956,18742,19181,19902,20725,22940,23290,25359,
#Partially deleted in new
chr4	932471	958656	chr4:932471-958656	0	+	932471	932471	8553170	11	69,184,500,98,52,36,84,165,79,136,833,	0,15237,15644,17949,18735,19210,19895,20718,22933,23283,25352,
#Partially deleted in new
chr4	932474	950491	chr4:932474-950491	0	+	932474	932474	8553170	3	66,446,71,	0,15234,17946,
#Partially deleted in new
chr4	932477	958509	chr4:932477-958509	1	+	950474	958496	789624	9	63,98,52,36,84,165,79,136,686,	0,17943,18729,19204,19889,20712,22927,23277,25346,
#Partially deleted in new
chr4	932479	958079	chr4:932479-958079	0	+	950474	958079	789624	10	61,39,98,52,36,84,165,79,136,256,	0,15636,17941,18727,19202,19887,20710,22925,23275,25344,
#Partially deleted in new
chr4	932481	952389	chr4:932481-952389	0	+	947739	952389	789624	8	59,128,184,39,98,52,36,23,	0,13517,15227,15634,17939,18725,19200,19885,
#Partially deleted in new
chr4	932486	948510	chr4:932486-948510	0	+	932486	932486	8553170	3	54,128,802,	0,13512,15222,
#Partially deleted in new
chr4	932516	958652	chr4:932516-958652	1	+	951687	958496	789624	12	24,184,39,205,98,52,72,84,165,79,136,829,	0,15192,15599,15894,17904,18690,19129,19850,20673,22888,23238,25307,
#Deleted in new
chr4	948410	953354	chr4:948410-953354	0	+	948410	948410	8553170	6	205,95,52,72,84,165,	0,2013,2796,3235,3956,4779,
#Deleted in new
chr4	950450	951973	chr4:950450-951973	0	+	950450	950450	8553170	3	68,52,292,	0,756,1231,
#Partially deleted in new
chr4	952410	955491	chr4:952410-955491	0	+	952410	952410	8553170	3	40,165,87,	0,779,2994,
#Partially deleted in new
chr4	958886	973556	chr4:958886-973556	3	-	960619	973482	789624	23	1835,153,112,147,101,179,149,152,116,39,151,62,55,91,233,101,75,148,126,86,100,80,345,	0,2162,2580,2801,3095,3548,3885,4252,6289,6604,7041,7579,7861,8077,8242,8662,8841,8993,9395,9592,9924,12106,14325,
#Partially deleted in new
chr4	958887	973322	chr4:958887-973322	0	-	960619	973322	789624	22	1834,153,112,147,101,179,149,152,116,151,62,55,91,233,101,75,148,126,86,100,80,111,	0,2161,2579,2800,3094,3547,3884,4251,6288,7040,7578,7860,8076,8241,8661,8840,8992,9394,9591,9923,12105,14324,
#Deleted in new
chr4	960614	962440	chr4:960614-962440	0	-	960619	962440	789624	5	107,153,112,101,6,	0,434,852,1367,1820,
#Deleted in new
chr4	963141	967175	chr4:963141-967175	0	-	963141	963141	8553170	9	149,21,116,39,238,62,55,91,47,	0,931,2034,2349,2922,3324,3606,3822,3987,
#Partially deleted in new
chr4	968290	986895	chr4:968290-986895	0	-	968290	986851	789624	5	117,86,100,80,90,	0,188,520,2702,18515,
#Partially deleted in new
chr4	979072	993376	chr4:979072-993376	1	-	979405	991703	789624	3	432,603,76,	0,12055,14228,
#Partially deleted in new
chr4	979405	993440	chr4:979405-993440	1	-	979405	991703	789624	4	99,603,215,140,	0,11722,13315,13895,
#Partially deleted in new
chr4	986996	1004506	chr4:986996-1004506	3	+	987084	1004393	0	14	246,141,86,108,96,203,180,217,213,122,126,77,101,247,	0,812,13615,13885,14471,14682,14985,15272,15735,16039,16348,16552,17015,17263,
#Partially deleted in new
chr4	987043	1002003	chr4:987043-1002003	0	+	987084	1002003	789624	6	199,86,108,96,203,22,	0,13568,13838,14424,14635,14938,
#Partially deleted in new
chr4	987043	1004505	chr4:987043-1004505	0	+	987043	987043	8553170	11	199,86,108,96,807,213,122,126,81,101,246,	0,13568,13838,14424,14635,15688,15992,16301,16505,16968,17216,
#Partially deleted in new
chr4	987065	1001138	chr4:987065-1001138	0	+	987065	987065	8553170	3	177,86,257,	0,13546,13816,
#Partially deleted in new
chr4	987075	1001179	chr4:987075-1001179	0	+	987075	987075	8553170	4	167,141,86,298,	0,733,13536,13806,
#Partially deleted in new
chr4	987086	1001715	chr4:987086-1001715	0	+	987086	1001715	789624	6	156,103,86,108,96,37,	0,722,13525,13795,14381,14592,
#Deleted in new
chr4	987656	993436	chr4:987656-993436	3	-	988832	991703	789624	4	2706,603,215,136,	0,3471,5064,5644,
#Deleted in new
chr4	987914	989623	chr4:987914-989623	0	+	987914	987914	8553170	2	35,393,	0,1316,
#Deleted in new
chr4	987996	993440	chr4:987996-993440	1	-	988832	991703	789624	3	2366,603,140,	0,3131,5304,
#Deleted in new
chr4	990620	991195	chr4:990620-991195	0	-	990620	990620	8553170	2	197,68,	0,507,
#Partially deleted in new
chr4	991824	1002069	chr4:991824-1002069	0	+	991824	1002069	789624	6	116,86,108,96,203,88,	0,8787,9057,9643,9854,10157,
#Partially deleted in new
chr4	991871	1001825	chr4:991871-1001825	0	+	992138	1001825	789624	5	359,86,108,96,147,	0,8740,9010,9596,9807,
#Deleted in new
chr4	999709	1004505	chr4:999709-1004505	1	+	1000892	1004393	789624	13	355,86,108,96,203,180,217,213,122,126,77,101,246,	0,902,1172,1758,1969,2272,2559,3022,3326,3635,3839,4302,4550,
#Deleted in new
chr4	1002740	1003389	chr4:1002740-1003389	0	+	1002740	1002740	8553170	2	204,354,	0,295,
#Deleted in new
chr4	1003428	1003724	chr4:1003428-1003724	0	+	1003428	1003428	8553170	2	42,176,	0,120,
#Deleted in new
chr4	1009935	1011027	chr4:1009935-1011027	0	+	1009935	1009935	8553170	2	234,101,	0,991,
#Partially deleted in new
chr4	1009978	1026891	chr4:1009978-1026891	3	+	1012485	1025347	789624	8	191,373,95,273,81,285,354,1987,	0,945,2491,12224,13662,13838,14332,14926,
#Partially deleted in new
chr4	1011821	1025987	chr4:1011821-1025987	1	+	1012485	1025347	789624	7	133,95,273,81,285,354,1083,	0,648,10381,11819,11995,12489,13083,
#Partially deleted in new
chr4	1012145	1025347	chr4:1012145-1025347	1	+	1012485	1025347	789624	7	132,95,273,81,285,354,443,	0,324,10057,11495,11671,12165,12759,
#Deleted in new
chr4	1012154	1022363	chr4:1012154-1022363	0	+	1012485	1022363	789624	2	410,161,	0,10048,
#Partially deleted in new
chr4	1012155	1023840	chr4:1012155-1023840	0	+	1012485	1023840	789624	5	89,95,273,81,24,	0,314,10047,11485,11661,
#Partially deleted in new
chr4	1012450	1026897	chr4:1012450-1026897	1	+	1012485	1025347	789624	6	114,273,81,285,354,1993,	0,9752,11190,11366,11860,12454,
#Deleted in new
chr4	1027677	1028972	chr4:1027677-1028972	3	+	1027677	1027677	8553170	2	106,166,	0,1129,
#Partially deleted in new
chr4	1056249	1058427	chr4:1056249-1058427	0	-	1056249	1056249	8553170	3	254,167,107,	0,588,2071,
#Partially deleted in new
chr4	1056253	1081603	chr4:1056253-1081603	0	-	1056253	1056253	8553170	5	250,73,64,46,37,	0,2067,17345,23389,25313,
#Partially deleted in new
chr4	1056253	1081957	chr4:1056253-1081957	0	-	1056253	1056253	8553170	6	243,161,73,64,46,391,	0,590,2067,17345,23389,25313,
#Partially deleted in new
chr4	1056253	1081957	chr4:1056253-1081957	0	-	1056253	1056253	8553170	6	250,167,73,64,46,391,	0,584,2067,17345,23389,25313,
#Partially deleted in new
chr4	1056865	1073754	chr4:1056865-1073754	0	-	1056865	1056865	8553170	3	139,73,156,	0,1455,16733,
#Partially deleted in new
chr4	1056912	1113540	chr4:1056912-1113540	0	-	1096789	1113464	789624	10	92,73,64,46,49,53,59,57,75,185,	0,1408,16686,22730,24506,24654,28983,33869,39852,56443,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	1071477	1113562	chr4:1071477-1113562	3	-	1073015	1113464	789624	10	1663,64,46,49,53,59,57,75,62,207,	0,2121,8165,9941,10089,14418,19304,25287,36865,41878,
#Partially deleted in new
chr4	1072755	1113526	chr4:1072755-1113526	1	-	1072873	1113464	789624	10	438,64,46,49,53,59,57,75,62,171,	0,843,6887,8663,8811,13140,18026,24009,35587,40600,
#Partially deleted in new
chr4	1072755	1113526	chr4:1072755-1113526	0	-	1073652	1113464	789624	7	438,64,59,57,75,62,171,	0,843,13140,18026,24009,35587,40600,
#Partially deleted in new
chr4	1072850	1113515	chr4:1072850-1113515	0	-	1096789	1113464	789624	8	290,64,46,53,59,57,75,160,	0,748,6792,8716,13045,17931,23914,40505,
#Partially deleted in new
chr4	1072921	1113541	chr4:1072921-1113541	0	-	1099750	1113464	789624	8	219,64,59,57,75,212,62,186,	0,677,12974,17860,23843,26794,35421,40434,
#Partially deleted in new
chr4	1085709	1099860	chr4:1085709-1099860	0	-	1085709	1085709	8553170	4	245,57,75,145,	0,5072,11055,14006,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	1093307	1113530	chr4:1093307-1113530	1	-	1093438	1113464	789624	4	707,75,62,175,	0,3457,15035,20048,
#Partially deleted in new
chr4	1096462	1113547	chr4:1096462-1113547	0	-	1096462	1096462	8553170	3	377,62,192,	0,11880,16893,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	1100015	1101558	chr4:1100015-1101558	7	-	1100015	1100015	16724991	2	353,851,	0,692,
#Partially deleted in new
chr4	1113638	1132950	chr4:1113638-1132950	3	+	1113638	1113638	789624	3	114,112,242,	0,18690,19070,
#Partially deleted in new
chr4	1115196	1123164	chr4:1115196-1123164	5	-	1115196	1115196	16724991	4	213,147,126,47,	0,1067,1951,7921,
#Partially deleted in new
chr4	1115262	1153726	chr4:1115262-1153726	7	-	1115262	1115262	16724991	5	147,147,126,144,126,	0,1001,1885,7852,38338,
#Partially deleted in new
chr4	1116263	1123174	chr4:1116263-1123174	4	-	1116263	1116263	16724991	2	147,57,	0,6854,
#Partially deleted in new
chr4	1118883	1119013	chr4:1118883-1119013	3	+	1118883	1118883	8553170	1	130,	0,
#Deleted in new
chr4	1132308	1132977	chr4:1132308-1132977	0	+	1132308	1132308	8553170	2	132,251,	0,418,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	1151371	1153701	chr4:1151371-1153701	3	+	1151371	1151371	8553170	2	1052,1113,	0,1217,
#Deleted in new
chr4	1166931	1172873	chr4:1166931-1172873	1	-	1167471	1172071	789624	6	725,175,192,224,223,330,	0,3470,4067,4331,4920,5612,
#Deleted in new
chr4	1166936	1173211	chr4:1166936-1173211	1	-	1167471	1172071	789624	7	720,175,192,224,223,136,132,	0,3465,4062,4326,4915,5607,6143,
#Partially deleted in new
chr4	1166936	1208962	chr4:1166936-1208962	3	-	1167471	1172071	789624	8	720,175,192,224,223,141,94,387,	0,3465,4062,4326,4915,5607,12511,41639,
#Deleted in new
chr4	1167777	1168174	chr4:1167777-1168174	3	+	1167777	1167777	8553170	1	397,	0,
#Deleted in new
chr4	1169762	1171070	chr4:1169762-1171070	0	-	1169762	1169762	8553170	2	814,72,	0,1236,
#Deleted in new
chr4	1171028	1171625	chr4:1171028-1171625	0	-	1171028	1171028	8553170	2	162,363,	0,234,
#Deleted in new
chr4	1171380	1173211	chr4:1171380-1173211	0	-	1171380	1172071	789624	4	106,223,136,132,	0,471,1163,1699,
#Deleted in new
chr4	1171382	1172298	chr4:1171382-1172298	0	-	1171382	1171382	8553170	2	104,447,	0,469,
#Deleted in new
chr4	1171525	1172845	chr4:1171525-1172845	0	-	1171525	1171525	8553170	2	549,302,	0,1018,
#Deleted in new
chr4	1171753	1173127	chr4:1171753-1173127	0	-	1171753	1171753	8553170	3	321,136,48,	0,790,1326,
#Partially deleted in new
chr4	1171878	1195134	chr4:1171878-1195134	0	-	1171878	1172071	789624	4	196,136,94,145,	0,665,7569,23111,
#Partially deleted in new
chr4	1171888	1195139	chr4:1171888-1195139	0	-	1171888	1172071	789624	4	186,141,94,150,	0,655,7559,23101,
#Deleted in new
chr4	1171999	1173170	chr4:1171999-1173170	0	-	1171999	1172071	789624	3	75,141,91,	0,544,1080,
#Partially deleted in new
chr4	1172021	1208145	chr4:1172021-1208145	0	-	1172021	1172071	789624	4	53,136,94,266,	0,522,7426,35858,
#Partially deleted in new
chr4	1172024	1208846	chr4:1172024-1208846	0	-	1172024	1172071	789624	4	50,141,94,271,	0,519,7423,36551,
#Partially deleted in new
chr4	1172048	1205088	chr4:1172048-1205088	0	-	1172048	1172071	789624	5	26,136,94,194,107,	0,495,7399,29220,32933,
#Partially deleted in new
chr4	1172574	1208838	chr4:1172574-1208838	0	-	1172574	1172574	8553170	3	105,94,263,	0,6873,36001,
#Partially deleted in new
chr4	1172586	1208367	chr4:1172586-1208367	0	-	1172586	1172586	8553170	2	93,488,	0,35293,
#Partially deleted in new
chr4	1196826	1208828	chr4:1196826-1208828	0	-	1196826	1196826	8553170	2	306,253,	0,11749,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	1199027	1208962	chr4:1199027-1208962	0	-	1199027	1199027	789624	4	1020,194,135,387,	0,2241,5954,9548,
#Deleted in new
chr4	1199612	1201357	chr4:1199612-1201357	0	-	1199612	1199612	8553170	2	435,85,	0,1660,
#Partially deleted in new
chr4	1199926	1205094	chr4:1199926-1205094	0	-	1199926	1199926	8553170	2	121,113,	0,5055,
#Deleted in new
chr4	1204981	1208377	chr4:1204981-1208377	0	-	1204981	1204981	8553170	2	135,498,	0,2898,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	1210119	1218591	chr4:1210119-1218591	3	+	1210119	1210119	789624	6	439,67,506,96,145,2633,	0,770,1914,2555,5426,5839,
#Partially deleted in new
chr4	1211447	1249137	chr4:1211447-1249137	3	-	1212239	1248955	0	9	976,118,128,131,215,207,145,155,222,	0,1465,2030,2895,4543,13912,16751,26735,37468,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	1211447	1249112	chr4:1211447-1249112	1	-	1212239	1241331	0	10	976,118,128,131,215,207,145,155,195,197,	0,1465,2030,2895,4543,13912,16751,26735,29877,37468,
#Deleted in new
chr4	1211684	1214462	chr4:1211684-1214462	0	-	1212239	1214462	789624	4	742,118,128,120,	0,1228,1793,2658,
#Deleted in new
chr4	1211913	1213050	chr4:1211913-1213050	0	-	1211913	1211913	8553170	2	510,138,	0,999,
#Partially deleted in new
chr4	1212181	1228284	chr4:1212181-1228284	0	-	1212239	1228284	789624	6	242,118,128,131,215,86,	0,731,1296,2161,3809,16017,
#Deleted in new
chr4	1212274	1213754	chr4:1212274-1213754	0	-	1212274	1212274	8553170	3	152,118,277,	0,638,1203,
#Partially deleted in new
chr4	1212912	1225389	chr4:1212912-1225389	0	-	1214281	1225389	789624	5	118,128,283,215,30,	0,565,1278,3078,12447,
#Deleted in new
chr4	1213990	1216407	chr4:1213990-1216407	0	-	1213990	1213990	8553170	2	483,417,	0,2000,
#Partially deleted in new
chr4	1214420	1231144	chr4:1214420-1231144	0	-	1214420	1214420	8553170	5	53,215,207,145,37,	0,1570,10939,13778,16687,
#Partially deleted in new
chr4	1216085	1233224	chr4:1216085-1233224	0	-	1216085	1216085	8553170	4	120,207,145,337,	0,9274,12113,16802,
#Partially deleted in new
chr4	1216174	1249953	chr4:1216174-1249953	0	-	1216174	1249670	789624	5	31,207,145,155,305,	0,9185,12024,22008,33474,
#Deleted in new
chr4	1221457	1225395	chr4:1221457-1225395	0	-	1221801	1225395	789624	2	382,36,	0,3902,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	1223419	1248976	chr4:1223419-1248976	0	-	1223419	1241331	789624	6	93,207,145,155,195,61,	0,1940,4779,14763,17905,25496,
#Partially deleted in new
chr4	1225350	1249118	chr4:1225350-1249118	0	-	1225350	1225350	8553170	3	216,145,203,	0,2848,23565,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	1225359	1249931	chr4:1225359-1249931	0	-	1225359	1241331	789624	5	207,145,155,195,283,	0,2839,12823,15965,24289,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	1225437	1248740	chr4:1225437-1248740	0	-	1225437	1241331	789624	5	129,145,155,195,80,	0,2761,12745,15887,23223,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	1234686	1241923	chr4:1234686-1241923	1	-	1237837	1241331	789624	2	3651,599,	0,6638,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	1235752	1241463	chr4:1235752-1241463	0	-	1235752	1235752	8553170	3	564,155,139,	0,2430,5572,
#Deleted in new
chr4	1237102	1237522	chr4:1237102-1237522	1	-	1237102	1237522	789624	2	162,48,	0,372,
#Deleted in new
chr4	1249299	1250446	chr4:1249299-1250446	1	+	1249299	1249299	8553170	2	403,336,	0,811,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	1249450	1288291	chr4:1249450-1288291	3	+	1249450	1249450	8553170	3	2372,119,266,	0,38154,38575,
#Deleted in new
chr4	1250109	1251187	chr4:1250109-1251187	1	+	1250109	1250109	8553170	2	241,292,	0,786,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	1250258	1255910	chr4:1250258-1255910	1	+	1250258	1250258	8553170	1	5652,	0,
#Deleted in new
chr4	1250525	1251436	chr4:1250525-1251436	0	+	1250525	1250525	8553170	1	911,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	1252990	1266163	chr4:1252990-1266163	1	+	1252990	1252990	8553170	2	1599,824,	0,12349,
#Partially deleted in new
chr4	1289850	1340137	chr4:1289850-1340137	3	+	1289913	1339169	789624	9	132,183,204,123,77,109,134,196,1064,	0,22128,25546,32530,37776,42906,47010,48571,49223,
#Partially deleted in new
chr4	1289886	1339177	chr4:1289886-1339177	1	+	1289913	1339169	789624	10	96,183,204,123,114,77,109,134,196,104,	0,22092,25510,32494,33608,37740,42870,46974,48535,49187,
#Partially deleted in new
chr4	1289889	1322418	chr4:1289889-1322418	0	+	1289913	1312233	789624	4	93,260,204,38,	0,22089,25507,32491,
#Partially deleted in new
chr4	1289890	1340136	chr4:1289890-1340136	1	+	1289913	1339169	789624	8	92,183,204,77,109,134,196,1063,	0,22088,25506,37736,42866,46970,48531,49183,
#Partially deleted in new
chr4	1289890	1336994	chr4:1289890-1336994	0	+	1289913	1336994	789624	6	92,183,204,123,109,134,	0,22088,25506,32490,42866,46970,
#Partially deleted in new
chr4	1289890	1327703	chr4:1289890-1327703	0	+	1289913	1298090	789624	6	92,160,183,204,123,77,	0,8065,22088,25506,32490,37736,
#Partially deleted in new
chr4	1289893	1332854	chr4:1289893-1332854	0	+	1289913	1332854	789624	5	89,183,123,77,98,	0,22085,32487,37733,42863,
#Partially deleted in new
chr4	1289893	1328682	chr4:1289893-1328682	0	+	1289913	1312233	789624	5	89,260,123,77,49,	0,22085,32487,37733,38740,
#Partially deleted in new
chr4	1289894	1340108	chr4:1289894-1340108	1	+	1289913	1339169	789624	7	88,183,204,109,134,192,1035,	0,22084,25502,42862,46966,48531,49179,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	1289896	1312586	chr4:1289896-1312586	0	+	1289896	1289896	8553170	2	86,608,	0,22082,
#Partially deleted in new
chr4	1289907	1329276	chr4:1289907-1329276	0	+	1289907	1289907	8553170	5	75,183,204,77,643,	0,22071,25489,37719,38726,
#Partially deleted in new
chr4	1289913	1339179	chr4:1289913-1339179	0	+	1289913	1338460	789624	7	69,183,204,109,134,196,106,	0,22065,25483,42843,46947,48508,49160,
#Partially deleted in new
chr4	1298069	1299969	chr4:1298069-1299969	0	+	1298069	1298069	8553170	2	46,440,	0,1460,
#Partially deleted in new
chr4	1309442	1339384	chr4:1309442-1339384	1	+	1309646	1339169	789624	9	270,183,204,123,77,109,134,196,311,	0,2536,5954,12938,18184,23314,27418,28979,29631,
#Partially deleted in new
chr4	1309466	1322414	chr4:1309466-1322414	0	+	1312053	1322414	789624	4	129,183,204,34,	0,2512,5930,12914,
#Partially deleted in new
chr4	1309786	1339281	chr4:1309786-1339281	1	+	1312053	1339169	789624	9	210,183,204,123,77,109,134,196,208,	0,2192,5610,12594,17840,22970,27074,28635,29287,
#Partially deleted in new
chr4	1329056	1340113	chr4:1329056-1340113	0	+	1329056	1329056	8553170	5	947,109,134,196,1040,	0,3700,7804,9365,10017,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	1329343	1340136	chr4:1329343-1340136	0	+	1329343	1329343	8553170	3	3522,134,1715,	0,7517,9078,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	1332166	1340113	chr4:1332166-1340113	0	+	1332166	1332166	8553170	4	699,134,196,1040,	0,4694,6255,6907,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	1332560	1340147	chr4:1332560-1340147	0	+	1332560	1332560	8553170	3	305,1757,1074,	0,4300,6513,
#Partially deleted in new
chr4	1347265	1386412	chr4:1347265-1386412	1	+	1348091	1385961	0	14	344,100,331,121,384,113,129,112,145,135,184,109,175,545,	0,824,2258,4449,5764,7469,7851,19054,28098,28768,32781,33614,36500,38602,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr4	1347315	1395989	chr4:1347315-1395989	3	+	1348091	1385961	0	14	445,100,331,121,384,113,129,112,145,135,184,109,175,10122,	0,774,2208,4399,5714,7419,7801,19004,28048,28718,32731,33564,36450,38552,
#Partially deleted in new
chr4	1347705	1386244	chr4:1347705-1386244	1	+	1348091	1385961	0	14	182,100,331,121,384,113,129,112,145,135,184,109,175,377,	0,384,1818,4009,5324,7029,7411,18614,27658,28328,32341,33174,36060,38162,
#Deleted in new
chr4	1354506	1355214	chr4:1354506-1355214	0	+	1354506	1354506	8553170	2	341,208,	0,500,
#Deleted in new
chr4	1356580	1358075	chr4:1356580-1358075	3	+	1356580	1356580	8553170	2	412,115,	0,1380,
#Deleted in new
chr4	1358478	1359461	chr4:1358478-1359461	3	+	1358478	1358478	8553170	2	85,356,	0,627,
#Partially deleted in new
chr4	1366076	1386258	chr4:1366076-1386258	1	+	1375422	1385961	0	7	355,145,135,184,109,175,391,	0,9287,9957,13970,14803,17689,19791,
#Partially deleted in new
chr4	1374906	1386414	chr4:1374906-1386414	1	+	1375422	1385961	0	7	373,145,135,184,109,175,547,	0,457,1127,5140,5973,8859,10961,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	1376033	1388049	chr4:1376033-1388049	0	+	1376033	1380730	789624	5	135,184,107,109,4284,	0,4013,4607,4846,7732,
#Deleted in new
chr4	1384811	1385909	chr4:1384811-1385909	0	+	1384811	1384811	8553170	2	628,42,	0,1056,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	1391551	1395992	chr4:1391551-1395992	1	+	1394511	1395852	789624	1	4441,	0,
#Deleted in new
chr4	1402931	1406331	chr4:1402931-1406331	3	-	1402931	1406331	789624	2	884,352,	0,3048,
#Deleted in new
chr4	1550283	1550572	chr4:1550283-1550572	3	+	1550283	1550283	8553170	1	289,	0,
#Partially deleted in new
chr4	1574061	1580253	chr4:1574061-1580253	3	-	1574061	1574061	8553170	2	483,96,	0,6096,
#Partially deleted in new
chr4	1617914	1655408	chr4:1617914-1655408	0	-	1618072	1655408	789624	2	197,431,	0,37063,
#Partially deleted in new
chr4	1639880	1684261	chr4:1639880-1684261	3	-	1641292	1668741	789624	5	1727,746,61,239,29,	0,15097,17527,28786,44352,
#Partially deleted in new
chr4	1640465	1684127	chr4:1640465-1684127	1	-	1641560	1668741	789624	6	1142,154,746,61,239,434,	0,3723,14512,16942,28201,43228,
#Partially deleted in new
chr4	1640494	1668905	chr4:1640494-1668905	1	-	1641292	1668741	789624	4	1113,746,61,239,	0,14483,16913,28172,
#Partially deleted in new
chr4	1640601	1683991	chr4:1640601-1683991	1	-	1641292	1668741	789624	5	1006,746,61,239,34,	0,14376,16806,28065,43356,
#Partially deleted in new
chr4	1641561	1644953	chr4:1641561-1644953	0	-	1641561	1641561	8553170	2	46,765,	0,2627,
#Partially deleted in new
chr4	1655535	1684302	chr4:1655535-1684302	0	-	1655535	1668741	789624	4	188,61,239,70,	0,1872,13131,28697,
#Partially deleted in new
chr4	1692799	1712318	chr4:1692799-1712318	1	-	1693596	1712188	0	7	914,67,150,138,60,105,189,	0,1974,3402,6764,7211,10796,19330,
#Partially deleted in new
chr4	1692799	1712555	chr4:1692799-1712555	3	-	1693596	1712188	0	8	914,67,150,138,60,105,117,426,	0,1974,3402,6764,7211,10796,19074,19330,
#Partially deleted in new
chr4	1692857	1712250	chr4:1692857-1712250	1	-	1693596	1712188	789624	8	856,67,150,138,81,105,117,121,	0,1916,3344,6706,7153,10738,19016,19272,
#Partially deleted in new
chr4	1693243	1712018	chr4:1693243-1712018	0	-	1693596	1712018	789624	6	470,67,150,138,60,145,	0,1530,2958,6320,6767,18630,
#Partially deleted in new
chr4	1693446	1712317	chr4:1693446-1712317	1	-	1693596	1712188	789624	7	267,67,150,138,60,117,188,	0,1327,2755,6117,6564,18427,18683,
#Partially deleted in new
chr4	1696294	1712344	chr4:1696294-1712344	0	-	1696294	1712344	789624	6	57,138,60,105,54,144,	0,3269,3716,7301,15579,15906,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	1712820	1713622	chr4:1712820-1713622	3	+	1712820	1712820	8553170	1	802,	0,
#Partially deleted in new
chr4	1715951	1721358	chr4:1715951-1721358	1	-	1717409	1720837	789624	3	1477,475,726,	0,2200,4681,
#Partially deleted in new
chr4	1715952	1721331	chr4:1715952-1721331	3	-	1717179	1720837	789624	4	1476,160,475,699,	0,1563,2199,4680,
#Partially deleted in new
chr4	1716506	1721331	chr4:1716506-1721331	1	-	1717179	1720837	789624	5	922,160,475,313,302,	0,1009,1645,4126,4523,
#Deleted in new
chr4	1716600	1718235	chr4:1716600-1718235	0	-	1717702	1718235	789624	3	828,188,84,	0,915,1551,
#Deleted in new
chr4	1716864	1717909	chr4:1716864-1717909	0	-	1716864	1716864	8553170	2	564,394,	0,651,
#Partially deleted in new
chr4	1718384	1720781	chr4:1718384-1720781	0	-	1719100	1720781	789624	4	242,127,243,149,	0,370,601,2248,
#Partially deleted in new
chr4	1721499	1735747	chr4:1721499-1735747	0	+	1723421	1735747	789624	7	144,163,143,76,130,53,17,	0,1921,2228,9387,9672,13773,14231,
#Partially deleted in new
chr4	1721518	1738350	chr4:1721518-1738350	0	+	1721518	1721518	8553170	10	125,163,143,1080,76,130,53,104,88,753,	0,1902,2209,6189,9368,9653,13754,14212,15722,16079,
#Partially deleted in new
chr4	1721534	1728232	chr4:1721534-1728232	0	+	1723421	1723731	789624	4	109,163,169,525,	0,1886,2167,6173,
#Partially deleted in new
chr4	1721538	1745171	chr4:1721538-1745171	3	+	1723421	1745013	0	16	105,163,143,1080,76,130,53,104,88,105,77,44,161,107,121,224,	0,1882,2189,6169,9348,9633,13734,14192,15702,16059,18163,18420,19287,22979,23173,23409,
#Partially deleted in new
chr4	1721544	1745168	chr4:1721544-1745168	1	+	1723421	1731227	789624	15	99,163,143,77,130,53,104,88,105,77,44,161,107,121,221,	0,1876,2183,9341,9627,13728,14186,15696,16053,18157,18414,19281,22973,23167,23403,
#Partially deleted in new
chr4	1721784	1728094	chr4:1721784-1728094	0	+	1723421	1728094	789624	4	132,163,143,387,	0,1636,1943,5923,
#Partially deleted in new
chr4	1723109	1728066	chr4:1723109-1728066	0	+	1723421	1728066	789624	4	113,163,143,359,	0,311,618,4598,
#Partially deleted in new
chr4	1728403	1735827	chr4:1728403-1735827	0	+	1728403	1735827	789624	5	384,76,60,33,97,	0,2483,2768,6889,7327,
#Partially deleted in new
chr4	1730802	1737645	chr4:1730802-1737645	0	+	1730802	1730802	8553170	6	160,130,53,104,88,48,	0,369,4470,4928,6438,6795,
#Deleted in new
chr4	1739344	1741294	chr4:1739344-1741294	0	+	1739344	1739344	8553170	3	434,44,469,	0,614,1481,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	1739350	1742121	chr4:1739350-1742121	0	+	1739350	1739350	8553170	1	2771,	0,
#Deleted in new
chr4	1744438	1745076	chr4:1744438-1745076	0	+	1744438	1744438	8553170	2	186,365,	0,273,
#Deleted in new
chr4	1793292	1808872	chr4:1793292-1808872	3	+	1793934	1807262	0	18	173,211,270,66,170,124,191,145,191,146,122,111,191,123,71,138,106,1757,	0,540,5961,6454,8074,8327,8542,10399,11037,11531,12062,12266,12457,12758,12964,13253,13536,13823,
#Deleted in new
chr4	1793306	1808865	chr4:1793306-1808865	1	+	1793934	1807288	789624	17	159,211,270,66,170,124,191,145,191,149,122,111,191,123,138,106,1750,	0,526,5947,6440,8060,8313,8528,10385,11023,11514,12048,12252,12443,12744,13239,13522,13809,
#Deleted in new
chr4	1793311	1808872	chr4:1793311-1808872	1	+	1793934	1807262	0	18	154,211,270,66,170,124,191,151,191,146,122,111,191,123,71,138,106,1757,	0,521,5942,6435,8055,8308,8523,9602,11018,11512,12043,12247,12438,12739,12945,13234,13517,13804,
#Deleted in new
chr4	1793311	1808872	chr4:1793311-1808872	1	+	1793934	1807262	0	16	154,211,270,66,170,124,191,146,122,111,191,123,71,138,106,1757,	0,521,5942,6435,8055,8308,8523,11512,12043,12247,12438,12739,12945,13234,13517,13804,
#Deleted in new
chr4	1793311	1808872	chr4:1793311-1808872	1	+	1793934	1803705	789624	19	154,211,270,66,170,124,191,151,145,191,146,122,111,191,123,71,138,106,1757,	0,521,5942,6435,8055,8308,8523,9602,10380,11018,11512,12043,12247,12438,12739,12945,13234,13517,13804,
#Deleted in new
chr4	1793895	1807322	chr4:1793895-1807322	1	+	1793934	1807262	0	15	148,270,66,170,124,191,146,122,111,191,123,71,138,106,207,	0,5358,5851,7471,7724,7939,10928,11459,11663,11854,12155,12361,12650,12933,13220,
#Deleted in new
chr4	1793934	1807275	chr4:1793934-1807275	0	+	1793934	1803705	789624	18	109,270,66,170,124,191,151,145,191,146,122,111,191,123,71,138,106,160,	0,5319,5812,7432,7685,7900,8979,9757,10395,10889,11420,11624,11815,12116,12322,12611,12894,13181,
#Deleted in new
chr4	1801461	1803739	chr4:1801461-1803739	0	+	1801461	1803739	789624	4	75,124,89,48,	0,158,373,2230,
#Deleted in new
chr4	1801628	1803152	chr4:1801628-1803152	0	+	1801628	1801628	8553170	3	115,191,239,	0,206,1285,
#Deleted in new
chr4	1801911	1804520	chr4:1801911-1804520	0	+	1801911	1801911	8553170	3	75,151,191,	0,1002,2418,
#Deleted in new
chr4	1804491	1805859	chr4:1804491-1805859	0	+	1804491	1804491	8553170	4	478,122,111,110,	0,863,1067,1258,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr4	1811478	1856247	chr4:1811478-1856247	3	-	1814423	1855950	789624	14	3095,139,188,135,132,144,132,120,204,138,144,451,61,379,	0,4185,5248,7859,10702,11509,12165,14085,21265,23366,24950,29868,37670,44390,
#Partially deleted in new
chr4	1819371	1822642	chr4:1819371-1822642	0	-	1819371	1819371	8553170	2	101,462,	0,2809,
#Partially deleted in new
chr4	1822773	1832879	chr4:1822773-1832879	0	-	1822773	1822773	8553170	4	358,132,120,136,	0,870,2790,9970,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	1833073	1843211	chr4:1833073-1843211	0	-	1833073	1833073	8553170	4	1909,144,451,206,	0,3355,8273,9932,
#Partially deleted in new
chr4	1834099	1855955	chr4:1834099-1855955	0	-	1834099	1834099	8553170	5	883,144,451,61,87,	0,2329,7247,15049,21769,
#Partially deleted in new
chr4	1834205	1839342	chr4:1834205-1839342	0	-	1834205	1834205	8553170	3	777,144,45,	0,2223,5092,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	1846473	1855971	chr4:1846473-1855971	0	-	1846473	1846473	8553170	3	156,61,103,	0,2675,9395,
#Partially deleted in new
chr4	1871423	1978914	chr4:1871423-1978914	3	+	1900654	1978909	0	22	119,626,163,167,483,145,119,82,125,132,124,201,180,157,206,104,270,117,142,107,205,277,	0,29202,32792,45447,46717,59202,63720,67027,68230,79648,80684,81900,83737,84269,84559,86509,88047,89611,103439,103870,105051,107214,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	1871453	1919187	chr4:1871453-1919187	0	+	1871453	1871453	8553170	5	89,626,163,167,1047,	0,29172,32762,45417,46687,
#Partially deleted in new
chr4	1871460	1941750	chr4:1871460-1941750	1	+	1900654	1939787	0	9	82,626,163,167,483,145,119,82,2097,	0,29165,32755,45410,46680,59165,63683,66990,68193,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	1887500	1901251	chr4:1887500-1901251	0	+	1900654	1901251	789624	2	190,626,	0,13125,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr4	1892781	1982203	chr4:1892781-1982203	0	+	1900654	1942401	0	25	110,180,175,626,163,167,483,145,119,82,125,94,132,124,201,180,157,206,104,270,117,142,107,205,3566,	0,948,6439,7844,11434,24089,25359,37844,42362,45669,46872,49557,58290,59326,60542,62379,62911,63201,65151,66689,68253,82081,82512,83693,85856,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr4	1892781	1982206	chr4:1892781-1982206	1	+	1900654	1978909	0	22	110,626,163,167,483,145,119,82,125,132,124,201,180,157,206,104,270,117,142,107,205,3569,	0,7844,11434,24089,25359,37844,42362,45669,46872,58290,59326,60542,62379,62911,63201,65151,66689,68253,82081,82512,83693,85856,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr4	1892781	1982203	chr4:1892781-1982203	1	+	1900654	1978909	0	23	110,175,626,163,167,483,145,119,82,125,132,124,201,180,157,206,104,270,117,142,107,205,3566,	0,6439,7844,11434,24089,25359,37844,42362,45669,46872,58290,59326,60542,62379,62911,63201,65151,66689,68253,82081,82512,83693,85856,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr4	1892844	1982203	chr4:1892844-1982203	0	+	1900654	1942401	0	25	47,180,175,626,163,167,483,145,119,82,125,227,132,124,201,180,157,206,104,270,117,142,107,205,3566,	0,885,6376,7781,11371,24026,25296,37781,42299,45606,46809,49494,58227,59263,60479,62316,62848,63138,65088,66626,68190,82018,82449,83630,85793,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr4	1892844	1982207	chr4:1892844-1982207	1	+	1900654	1978909	0	24	47,180,175,626,163,167,483,145,119,82,125,132,124,201,180,157,206,104,270,117,142,107,205,3570,	0,885,6376,7781,11371,24026,25296,37781,42299,45606,46809,58227,59263,60479,62316,62848,63138,65088,66626,68190,82018,82449,83630,85793,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	1892844	1942575	chr4:1892844-1942575	1	+	1900654	1939787	0	11	47,180,175,626,163,167,483,145,119,82,2922,	0,885,6376,7781,11371,24026,25296,37781,42299,45606,46809,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	1899217	1948818	chr4:1899217-1948818	1	+	1900654	1942401	0	10	178,626,163,167,483,145,119,82,125,6480,	0,1408,4998,17653,18923,31408,35926,39233,40436,43121,
#Partially deleted in new
chr4	1900618	1918389	chr4:1900618-1918389	0	+	1900654	1918389	789624	4	633,163,167,249,	0,3597,16252,17522,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	1900625	1948818	chr4:1900625-1948818	1	+	1900654	1942401	0	9	626,163,167,483,145,119,82,125,6480,	0,3590,16245,17515,30000,34518,37825,39028,41713,
#Partially deleted in new
chr4	1900641	1912152	chr4:1900641-1912152	1	+	1900654	1912152	0	3	610,163,62,	0,3574,11449,
#Partially deleted in new
chr4	1900649	1918199	chr4:1900649-1918199	0	+	1900654	1912152	0	5	602,163,104,167,59,	0,3566,11441,16221,17491,
#Partially deleted in new
chr4	1918431	1951180	chr4:1918431-1951180	0	+	1918431	1939689	789624	5	192,145,119,125,109,	0,12194,16712,21222,32640,
#Partially deleted in new
chr4	1930729	1953446	chr4:1930729-1953446	0	+	1930729	1930729	8553170	5	41,119,132,233,123,	0,4414,20342,21269,22594,
#Partially deleted in new
chr4	1939280	1979796	chr4:1939280-1979796	0	+	1939280	1939280	8553170	14	498,132,124,201,180,157,206,104,270,117,142,107,205,1159,	0,11791,12827,14043,15880,16412,16702,18652,20190,21754,35582,36013,37194,39357,
#Partially deleted in new
chr4	1939660	1956188	chr4:1939660-1956188	0	+	1939660	1956188	789624	6	118,132,124,114,157,206,	0,11411,12447,15566,16032,16322,
#Partially deleted in new
chr4	1939751	1955221	chr4:1939751-1955221	0	+	1939751	1939751	8553170	4	27,132,201,61,	0,11320,13572,15409,
#Partially deleted in new
chr4	1952104	1978915	chr4:1952104-1978915	1	+	1953142	1978909	0	12	127,773,180,157,206,104,270,117,142,107,205,278,	0,647,3056,3588,3878,5828,7366,8930,22758,23189,24370,26533,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	1952104	1956158	chr4:1952104-1956158	0	+	1952104	1952104	8553170	6	127,201,149,180,157,176,	0,1219,2432,3056,3588,3878,
#Partially deleted in new
chr4	1953117	1956186	chr4:1953117-1956186	0	+	1953117	1953117	8553170	5	70,201,180,157,204,	0,206,2043,2575,2865,
#Partially deleted in new
chr4	1955578	1958018	chr4:1955578-1958018	0	+	1955578	1955578	8553170	3	271,206,86,	0,404,2354,
#Deleted in new
chr4	1974635	1974760	chr4:1974635-1974760	3	+	1974635	1974635	789624	1	125,	0,
#Deleted in new
chr4	1974786	1975646	chr4:1974786-1975646	0	+	1974786	1974786	8553170	2	218,353,	0,507,
#Partially deleted in new
chr4	1976352	1978902	chr4:1976352-1978902	0	+	1976352	1976352	8553170	2	327,265,	0,2285,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	1982713	2010110	chr4:1982713-2010110	1	-	1983318	2008992	789624	11	790,100,266,112,89,70,131,90,162,172,1361,	0,882,1134,2094,3062,3400,3558,5204,6994,8830,26036,
#Partially deleted in new
chr4	1982716	2009235	chr4:1982716-2009235	1	-	1983318	2008992	789624	11	787,100,266,112,89,70,131,90,162,172,486,	0,879,1131,2091,3059,3397,3555,5201,6991,8827,26033,
#Partially deleted in new
chr4	1982722	2008975	chr4:1982722-2008975	3	-	1983318	2008959	0	11	781,100,266,112,89,70,131,90,162,172,226,	0,873,1125,2085,3053,3391,3549,5195,6985,8821,26027,
#Deleted in new
chr4	1982722	1986560	chr4:1982722-1986560	0	-	1982722	1982722	8553170	7	781,100,266,112,89,70,289,	0,873,1125,2085,3053,3391,3549,
#Partially deleted in new
chr4	1982729	2009183	chr4:1982729-2009183	0	-	1989818	2008959	789624	10	774,100,266,112,89,70,131,90,162,434,	0,866,1118,2078,3046,3384,3542,5188,6978,26020,
#Partially deleted in new
chr4	1982729	1992624	chr4:1982729-1992624	0	-	1983318	1992624	789624	11	774,100,266,112,89,70,131,90,162,172,222,	0,866,1118,2078,3046,3384,3542,5188,6978,8814,9673,
#Partially deleted in new
chr4	1982729	1992244	chr4:1982729-1992244	0	-	1982729	1982729	8553170	10	774,100,266,112,89,70,131,90,162,701,	0,866,1118,2078,3046,3384,3542,5188,6978,8814,
#Partially deleted in new
chr4	1984807	1990501	chr4:1984807-1990501	0	-	1984807	1990501	789624	7	112,89,70,131,90,162,84,	0,968,1306,1464,3110,4900,5610,
#Partially deleted in new
chr4	1986113	2008997	chr4:1986113-2008997	0	-	1986113	2008992	789624	6	70,131,90,162,187,248,	0,158,1804,3594,5430,22636,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	1986114	2041903	chr4:1986114-2041903	0	-	1986114	1991715	789624	8	69,131,90,162,172,78,132,188,	0,157,1803,3593,5429,31550,37290,55601,
#Partially deleted in new
chr4	1986279	1990054	chr4:1986279-1990054	0	-	1986279	1986279	8553170	3	123,90,347,	0,1638,3428,
#Deleted in new
chr4	1986383	1986477	chr4:1986383-1986477	3	-	1986383	1986383	5263520	1	94,	0,
#Partially deleted in new
chr4	1987500	1989756	chr4:1987500-1989756	0	-	1987500	1987500	8553170	2	507,49,	0,2207,
#Partially deleted in new
chr4	1987941	2008835	chr4:1987941-2008835	0	-	1987941	2008835	789624	5	66,162,172,75,86,	0,1766,3602,20030,20808,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	2003837	2008942	chr4:2003837-2008942	0	-	2007100	2008942	789624	4	313,202,84,193,	0,3160,4125,4912,
#Deleted in new
chr4	2041992	2043970	chr4:2041992-2043970	1	+	2041994	2043926	789624	4	76,158,89,110,	0,334,743,1868,
#Deleted in new
chr4	2042049	2043964	chr4:2042049-2043964	3	+	2042351	2043926	789624	4	126,158,89,104,	0,277,686,1811,
#Deleted in new
chr4	2059511	2069088	chr4:2059511-2069088	3	+	2059511	2064127	789624	3	376,165,5329,	0,1486,4248,
#Deleted in new
chr4	2059811	2069089	chr4:2059811-2069089	1	+	2061125	2064127	789624	3	76,165,5330,	0,1186,3948,
#Partially deleted in new
chr4	2071917	2229231	chr4:2071917-2229231	1	-	2072113	2229231	0	24	382,62,68,79,111,132,83,115,78,58,66,54,57,96,84,65,61,69,158,113,194,501,80,133,	0,1050,3534,9040,9715,13695,23933,56195,57261,59315,84870,85940,87237,98761,99180,102037,102773,104348,107390,121286,126606,136069,141129,157181,
#Partially deleted in new
chr4	2071917	2242121	chr4:2071917-2242121	3	-	2072113	2229231	0	26	382,62,68,79,111,132,83,115,78,58,66,54,57,96,84,65,61,69,158,113,194,501,80,145,271,71,	0,1050,3534,9040,9715,13695,23933,56195,57261,59315,84870,85940,87237,98761,99180,102037,102773,104348,107390,121286,126606,136069,141129,157181,169602,170133,
#Deleted in new
chr4	2071921	2077058	chr4:2071921-2077058	0	-	2071921	2071921	8553170	4	378,62,68,505,	0,1046,3530,4632,
#Partially deleted in new
chr4	2071949	2179387	chr4:2071949-2179387	0	-	2072113	2179387	789624	19	350,35,68,79,111,132,83,115,78,58,66,54,57,93,84,65,61,69,80,	0,1045,3502,9008,9683,13663,23901,56163,57229,59283,84838,85908,87205,98732,99148,102005,102741,104316,107358,
#Partially deleted in new
chr4	2071959	2081053	chr4:2071959-2081053	0	-	2071959	2071959	8553170	4	340,62,68,96,	0,1008,3492,8998,
#Deleted in new
chr4	2071959	2076447	chr4:2071959-2076447	0	-	2071959	2071959	8553170	4	340,62,68,89,	0,1008,3492,4399,
#Partially deleted in new
chr4	2078484	2081041	chr4:2078484-2081041	0	-	2078484	2078484	8553170	2	434,84,	0,2473,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr4	2078491	2208111	chr4:2078491-2208111	0	-	2078491	2078491	8553170	14	2663,111,132,83,115,78,58,96,84,65,61,113,194,125,	0,3141,7121,17359,49621,50687,52741,92187,92606,95463,96199,114712,120032,129495,
#Partially deleted in new
chr4	2081109	2083010	chr4:2081109-2083010	0	-	2081109	2081109	8553170	3	49,111,330,	0,523,1571,
#Partially deleted in new
chr4	2081395	2090305	chr4:2081395-2090305	0	-	2081395	2081395	8553170	3	348,132,119,	0,4217,8791,
#Deleted in new
chr4	2088717	2090617	chr4:2088717-2090617	7	-	2088717	2088717	16724991	1	1900,	0,
#Partially deleted in new
chr4	2139672	2141058	chr4:2139672-2141058	3	+	2139672	2139672	8553170	2	349,232,	0,1154,
#Partially deleted in new
chr4	2156393	2242121	chr4:2156393-2242121	0	-	2156393	2156393	8553170	17	107,66,54,57,96,84,65,61,69,158,113,194,501,80,145,262,71,	0,394,1464,2761,14285,14704,17561,18297,19872,22914,36810,42130,51593,56653,72705,85126,85657,
#Partially deleted in new
chr4	2156496	2159211	chr4:2156496-2159211	0	-	2156496	2156496	8553170	3	357,54,57,	0,1361,2658,
#Partially deleted in new
chr4	2208326	2232143	chr4:2208326-2232143	0	-	2208326	2208326	8553170	4	161,80,145,199,	0,4720,20772,23618,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	2227463	2242121	chr4:2227463-2242121	1	-	2228410	2240946	789624	5	995,73,440,1056,602,	0,8920,11140,12574,14056,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	2228348	2242133	chr4:2228348-2242133	3	-	2231926	2240946	789624	5	3812,229,440,1056,83,	0,7879,10255,11689,13702,
#Partially deleted in new
chr4	2231840	2242164	chr4:2231840-2242164	1	-	2231926	2240946	789624	6	320,229,440,1056,271,114,	0,4387,6763,8197,9679,10210,
#Deleted in new
chr4	2234250	2234499	chr4:2234250-2234499	7	+	2234250	2234250	16724991	1	249,	0,
#Deleted in new
chr4	2240846	2242121	chr4:2240846-2242121	0	-	2240846	2240946	789624	3	247,262,71,	0,673,1204,
#Deleted in new
chr4	2240915	2242128	chr4:2240915-2242128	0	-	2240915	2240946	789624	3	178,318,78,	0,604,1135,
#Deleted in new
chr4	2247431	2262294	chr4:2247431-2262294	3	-	2250543	2261980	789624	6	3270,163,115,30,100,378,	0,3652,4976,10550,14293,14485,
#Deleted in new
chr4	2249463	2255234	chr4:2249463-2255234	0	-	2249463	2249463	8553170	3	1238,163,2827,	0,1620,2944,
#Deleted in new
chr4	2250076	2250156	chr4:2250076-2250156	3	-	2250076	2250076	5263520	1	80,	0,
#Deleted in new
chr4	2250657	2261799	chr4:2250657-2261799	0	-	2255209	2261799	789624	6	44,163,115,197,30,75,	0,426,1750,4497,7324,11067,
#Deleted in new
chr4	2255008	2262022	chr4:2255008-2262022	0	-	2255008	2255008	8553170	4	286,30,100,106,	0,2973,6716,6908,
#Deleted in new
chr4	2255142	2262022	chr4:2255142-2262022	0	-	2258897	2261980	789624	5	152,30,173,100,106,	0,2839,3742,6582,6774,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	2269581	2287715	chr4:2269581-2287715	1	-	2270724	2274182	789624	7	1275,104,105,117,155,779,1293,	0,1729,2093,3591,4480,15761,16841,
#Partially deleted in new
chr4	2269597	2418663	chr4:2269597-2418663	3	-	2270724	2418323	789624	13	1259,104,105,117,155,1248,102,90,90,203,138,141,379,	0,1713,2077,3575,4464,34691,50572,66107,67809,69855,71880,84335,148687,
#Partially deleted in new
chr4	2270338	2418636	chr4:2270338-2418636	1	-	2270724	2418323	789624	12	518,104,105,117,155,1248,102,90,203,138,141,352,	0,972,1336,2834,3723,33950,49831,67068,69114,71139,83594,147946,
#Partially deleted in new
chr4	2270494	2364877	chr4:2270494-2364877	1	-	2270724	2341585	789624	13	362,104,105,117,155,1248,102,90,90,203,138,141,392,	0,816,1180,2678,3567,33794,49675,65210,66912,68958,70983,83438,93991,
#Deleted in new
chr4	2270917	2271751	chr4:2270917-2271751	0	-	2270917	2270917	8553170	2	497,77,	0,757,
#Partially deleted in new
chr4	2295583	2319089	chr4:2295583-2319089	3	+	2295583	2295583	8553170	3	262,208,93,	0,11307,23413,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	2316196	2316506	chr4:2316196-2316506	3	-	2316196	2316196	8553170	1	310,	0,
#Partially deleted in new
chr4	2324466	2325082	chr4:2324466-2325082	7	+	2324466	2324466	16724991	1	616,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	2328533	2364804	chr4:2328533-2364804	1	-	2329141	2341585	789624	7	609,90,90,203,138,141,319,	0,7171,8873,10919,12944,25399,35952,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	2328805	2418651	chr4:2328805-2418651	1	-	2329093	2418323	789624	5	337,90,203,138,367,	0,8601,10647,12672,89479,
#Partially deleted in new
chr4	2330161	2418609	chr4:2330161-2418609	1	-	2330885	2418323	789624	7	887,90,90,203,138,141,325,	0,5543,7245,9291,11316,23771,88123,
#Partially deleted in new
chr4	2339516	2406665	chr4:2339516-2406665	0	-	2339516	2341585	789624	4	139,138,141,123,	0,1961,14416,67026,
#Partially deleted in new
chr4	2341315	2364827	chr4:2341315-2364827	0	-	2341315	2341315	8553170	3	300,141,135,	0,12617,23377,
#Deleted in new
chr4	2342580	2343524	chr4:2342580-2343524	0	-	2342580	2342580	8553170	2	623,216,	0,728,
#Partially deleted in new
chr4	2418973	2429245	chr4:2418973-2429245	0	+	2418973	2418973	8553170	3	120,128,2542,	0,7485,7730,
#Partially deleted in new
chr4	2418973	2462942	chr4:2418973-2462942	1	+	2426475	2462926	789624	15	120,128,145,95,113,178,81,72,72,89,205,142,152,206,500,	0,7485,17900,19096,24156,26157,30696,30960,31973,32290,33168,39749,40133,41063,43469,
#Partially deleted in new
chr4	2426475	2462926	chr4:2426475-2462926	3	+	2426475	2462926	789624	15	111,145,95,113,178,81,72,72,89,205,142,152,206,163,117,	0,10398,11594,16654,18655,23194,23458,24471,24788,25666,32247,32631,33561,35967,36334,
#Partially deleted in new
chr4	2426520	2450360	chr4:2426520-2450360	0	+	2426520	2426520	8553170	6	66,145,95,113,81,427,	0,10353,11549,16609,23149,23413,
#Partially deleted in new
chr4	2443196	2450356	chr4:2443196-2450356	0	+	2443196	2443196	8553170	4	46,178,81,423,	0,1934,6473,6737,
#Partially deleted in new
chr4	2443214	2450356	chr4:2443214-2450356	0	+	2443214	2443214	8553170	4	28,178,84,423,	0,1916,6452,6719,
#Partially deleted in new
chr4	2460036	2462911	chr4:2460036-2462911	0	+	2460036	2462911	789624	3	206,163,102,	0,2406,2773,
#Partially deleted in new
chr4	2462219	2497012	chr4:2462219-2497012	0	+	2490493	2497012	8553170	3	386,166,6,	0,28117,34787,
#Deleted in new
chr4	2463796	2464124	chr4:2463796-2464124	3	+	2463796	2463796	8553170	2	68,152,	0,176,
#Partially deleted in new
chr4	2468728	2500738	chr4:2468728-2500738	0	+	2490493	2500738	789624	4	199,166,115,80,	0,21608,28278,31930,
#Partially deleted in new
chr4	2468936	2515855	chr4:2468936-2515855	3	+	2490493	2513819	0	8	322,166,115,80,10,160,49,2186,	0,21400,28070,31722,43019,43501,44146,44733,
#Partially deleted in new
chr4	2469067	2515854	chr4:2469067-2515854	1	+	2490493	2513748	0	7	191,166,115,80,10,49,2185,	0,21269,27939,31591,42888,44015,44602,
#Partially deleted in new
chr4	2469096	2513811	chr4:2469096-2513811	0	+	2490493	2513811	789624	8	133,166,115,80,10,160,49,142,	0,21240,27910,31562,42859,43341,43986,44573,
#Partially deleted in new
chr4	2469103	2513131	chr4:2469103-2513131	0	+	2469103	2469103	8553170	6	155,115,80,10,160,49,	0,27903,31555,42852,43334,43979,
#Partially deleted in new
chr4	2469104	2513711	chr4:2469104-2513711	0	+	2490493	2513711	789624	7	154,166,115,80,10,49,42,	0,21232,27902,31554,42851,43978,44565,
#Partially deleted in new
chr4	2469105	2512334	chr4:2469105-2512334	1	+	2490493	2512021	789624	5	153,166,115,80,379,	0,21231,27901,31553,42850,
#Partially deleted in new
chr4	2469105	2512590	chr4:2469105-2512590	0	+	2469105	2469105	8553170	6	153,75,115,80,10,153,	0,21231,27901,31553,42850,43332,
#Partially deleted in new
chr4	2469106	2490798	chr4:2469106-2490798	0	+	2469106	2469106	8553170	2	152,462,	0,21230,
#Partially deleted in new
chr4	2469106	2512511	chr4:2469106-2512511	0	+	2490493	2511963	789624	5	152,166,115,10,74,	0,21230,27900,42849,43331,
#Partially deleted in new
chr4	2469136	2497300	chr4:2469136-2497300	0	+	2469136	2469136	8553170	3	122,166,294,	0,21200,27870,
#Partially deleted in new
chr4	2469139	2514503	chr4:2469139-2514503	1	+	2490493	2513748	0	7	119,166,115,80,10,49,834,	0,21197,27867,31519,42816,43943,44530,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	2469139	2497079	chr4:2469139-2497079	0	+	2469139	2469139	8553170	4	119,166,189,73,	0,21197,25424,27867,
#Partially deleted in new
chr4	2469158	2512597	chr4:2469158-2512597	0	+	2469158	2469158	8553170	5	100,166,80,10,160,	0,21178,31500,42797,43279,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	2469180	2497103	chr4:2469180-2497103	0	+	2469180	2469180	8553170	3	78,123,97,	0,1806,27826,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	2469193	2497079	chr4:2469193-2497079	0	+	2469193	2469193	8553170	4	65,166,186,73,	0,21143,25373,27813,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	2469452	2514474	chr4:2469452-2514474	1	+	2490493	2513819	0	9	590,123,166,115,80,10,160,49,805,	0,1534,20884,27554,31206,42503,42985,43630,44217,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	2479852	2515854	chr4:2479852-2515854	1	+	2490493	2513819	0	8	1358,166,115,80,10,160,49,2185,	0,10484,17154,20806,32103,32585,33230,33817,
#Partially deleted in new
chr4	2489810	2500698	chr4:2489810-2500698	0	+	2490493	2500698	789624	4	95,166,115,40,	0,526,7196,10848,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	2505080	2506279	chr4:2505080-2506279	7	-	2505080	2505080	16724991	2	251,649,	0,550,
#Partially deleted in new
chr4	2512476	2625320	chr4:2512476-2625320	0	+	2512476	2596105	789624	5	121,49,128,246,59,	0,606,1193,83607,112785,
#Partially deleted in new
chr4	2536630	2731920	chr4:2536630-2731920	1	+	2536915	2731868	789624	21	540,246,134,168,235,125,148,78,113,243,154,180,252,199,273,289,184,231,865,82,146,	0,59453,88631,89779,94304,103104,110054,121172,122927,123181,126207,126478,135490,152875,154067,156955,158315,159732,163049,179392,195144,
#Deleted in new
chr4	2607869	2608146	chr4:2607869-2608146	7	-	2607869	2607869	16724991	1	277,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	2615123	2615224	chr4:2615123-2615224	3	-	2615123	2615123	8553170	1	101,	0,
#Partially deleted in new
chr4	2625431	2732552	chr4:2625431-2732552	3	+	2631004	2731868	789624	19	113,168,235,125,148,78,113,243,154,180,252,199,273,289,184,231,865,82,778,	0,978,5503,14303,21253,32371,34126,34380,37406,37677,46689,64074,65266,68154,69514,70931,74248,90591,106343,
#Partially deleted in new
chr4	2625431	2732552	chr4:2625431-2732552	0	+	2631004	2696385	789624	19	113,168,235,125,148,78,113,243,154,180,252,199,273,289,137,231,865,82,778,	0,978,5503,14303,21253,32371,34126,34380,37406,37677,46689,64074,65266,68154,69514,70931,74248,90591,106343,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr4	2625431	2720034	chr4:2625431-2720034	1	+	2631004	2720034	789624	19	113,168,235,125,148,78,113,243,154,180,252,199,273,289,184,231,865,82,55,	0,978,5503,14303,21253,32371,34126,34380,37406,37677,46689,64074,65266,68154,69514,70931,74248,90591,94548,
#Partially deleted in new
chr4	2625461	2731889	chr4:2625461-2731889	1	+	2631004	2731868	789624	20	83,168,235,125,148,72,78,113,243,148,180,252,199,273,289,184,231,865,82,115,	0,948,5473,14273,21223,29596,32341,34096,34350,37382,37647,46659,64044,65236,68124,69484,70901,74218,90561,106313,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr4	2625461	2731889	chr4:2625461-2731889	1	+	2631004	2720034	789624	20	83,168,235,125,148,78,113,243,154,180,252,199,273,289,184,231,865,82,93,115,	0,948,5473,14273,21223,32341,34096,34350,37376,37647,46659,64044,65236,68124,69484,70901,74218,90561,94518,106313,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr4	2625461	2731889	chr4:2625461-2731889	0	+	2631004	2695141	789624	20	83,168,235,125,148,78,113,243,154,180,252,199,273,289,197,231,865,172,82,115,	0,948,5473,14273,21223,32341,34096,34350,37376,37647,46659,64044,65236,68124,69484,70901,74218,89860,90561,106313,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	2654420	2700501	chr4:2654420-2700501	0	+	2657802	2700501	789624	13	709,78,113,243,154,180,252,199,273,289,184,231,822,	0,3382,5137,5391,8417,8688,17700,35085,36277,39165,40525,41942,45259,
#Partially deleted in new
chr4	2659887	2663203	chr4:2659887-2663203	0	+	2659887	2659887	8553170	2	167,366,	0,2950,
#Partially deleted in new
chr4	2696273	2699938	chr4:2696273-2699938	0	+	2696273	2696273	8553170	2	320,259,	0,3406,
#Partially deleted in new
chr4	2741647	2756331	chr4:2741647-2756331	1	-	2742256	2747900	0	6	873,120,249,90,291,383,	0,2739,3049,3798,6007,14301,
#Partially deleted in new
chr4	2741659	2756376	chr4:2741659-2756376	3	-	2742256	2756289	0	6	861,120,249,90,291,363,	0,2727,3037,3786,5995,14354,
#Partially deleted in new
chr4	2741697	2756342	chr4:2741697-2756342	1	-	2742256	2756289	789624	5	823,120,90,291,329,	0,2689,3748,5957,14316,
#Deleted in new
chr4	2742074	2744863	chr4:2742074-2744863	0	-	2742074	2742074	8553170	2	446,477,	0,2312,
#Deleted in new
chr4	2742129	2746158	chr4:2742129-2746158	0	-	2742129	2742129	8553170	5	391,120,249,90,130,	0,2257,2567,3316,3899,
#Partially deleted in new
chr4	2745335	2756024	chr4:2745335-2756024	0	-	2745335	2745335	8553170	3	200,291,49,	0,2319,10640,
#Partially deleted in new
chr4	2747449	2756024	chr4:2747449-2756024	0	-	2747449	2747449	8553170	2	496,76,	0,8499,
#Partially deleted in new
chr4	2793022	2834293	chr4:2793022-2834293	3	+	2820617	2833834	0	13	116,140,103,118,71,89,69,655,109,56,82,60,597,	0,27591,29912,31590,32103,34207,34583,36470,38548,38900,39308,39967,40674,
#Partially deleted in new
chr4	2793070	2825196	chr4:2793070-2825196	0	+	2820617	2825196	789624	6	68,51,140,103,118,71,	0,16708,27543,29864,31542,32055,
#Partially deleted in new
chr4	2793071	2824917	chr4:2793071-2824917	0	+	2793071	2793071	8553170	4	67,140,103,305,	0,27542,29863,31541,
#Partially deleted in new
chr4	2793723	2796646	chr4:2793723-2796646	0	+	2793723	2793723	8553170	3	34,100,273,	0,439,2650,
#Partially deleted in new
chr4	2794158	2824914	chr4:2794158-2824914	0	+	2794158	2794158	8553170	4	104,140,103,302,	0,26455,28776,30454,
#Partially deleted in new
chr4	2794158	2824782	chr4:2794158-2824782	0	+	2794158	2794158	8553170	4	104,140,103,170,	0,26455,28776,30454,
#Partially deleted in new
chr4	2798563	2827318	chr4:2798563-2827318	0	+	2820617	2827318	789624	6	36,140,103,118,71,89,	0,22050,24371,26049,26562,28666,
#Partially deleted in new
chr4	2798997	2827652	chr4:2798997-2827652	0	+	2820617	2827652	789624	7	308,140,103,118,71,89,47,	0,21616,23937,25615,26128,28232,28608,
#Partially deleted in new
chr4	2799068	2825220	chr4:2799068-2825220	0	+	2820617	2823449	0	6	237,140,103,175,118,95,	0,21545,23866,24326,25544,26057,
#Partially deleted in new
chr4	2809778	2827317	chr4:2809778-2827317	0	+	2809778	2809778	8553170	5	51,140,103,584,88,	0,10835,13156,14834,17451,
#Partially deleted in new
chr4	2811797	2827670	chr4:2811797-2827670	0	+	2820617	2827670	789624	7	102,140,103,118,71,89,65,	0,8816,11137,12815,13328,15432,15808,
#Partially deleted in new
chr4	2811929	2825178	chr4:2811929-2825178	0	+	2820617	2825178	789624	5	195,140,103,118,53,	0,8684,11005,12683,13196,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	2812218	2841096	chr4:2812218-2841096	1	+	2812397	2833834	0	13	259,140,103,118,71,89,69,655,109,56,82,60,7400,	0,8395,10716,12394,12907,15011,15387,17274,19352,19704,20112,20771,21478,
#Partially deleted in new
chr4	2812289	2825196	chr4:2812289-2825196	0	+	2820617	2825196	789624	6	188,107,140,103,118,71,	0,2521,8324,10645,12323,12836,
#Partially deleted in new
chr4	2812300	2827296	chr4:2812300-2827296	0	+	2812300	2812300	8553170	5	177,140,103,584,67,	0,8313,10634,12312,14929,
#Partially deleted in new
chr4	2812303	2834288	chr4:2812303-2834288	1	+	2820617	2833834	0	13	174,140,103,118,71,89,69,655,109,56,82,60,592,	0,8310,10631,12309,12822,14926,15302,17189,19267,19619,20027,20686,21393,
#Partially deleted in new
chr4	2814833	2818225	chr4:2814833-2818225	0	+	2814833	2814833	8553170	2	84,407,	0,2985,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	2818184	2841096	chr4:2818184-2841096	1	+	2818223	2833834	0	13	206,140,103,118,71,89,69,655,109,56,82,60,7400,	0,2429,4750,6428,6941,9045,9421,11308,13386,13738,14146,14805,15512,
#Partially deleted in new
chr4	2818184	2834289	chr4:2818184-2834289	1	+	2820617	2833834	0	13	206,140,103,118,71,89,69,655,109,56,82,60,593,	0,2429,4750,6428,6941,9045,9421,11308,13386,13738,14146,14805,15512,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	2818715	2825101	chr4:2818715-2825101	0	+	2818715	2818715	8553170	4	355,140,103,489,	0,1898,4219,5897,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	2818813	2841098	chr4:2818813-2841098	1	+	2820617	2833834	0	13	257,140,103,118,71,89,69,655,109,56,82,60,7402,	0,1800,4121,5799,6312,8416,8792,10679,12757,13109,13517,14176,14883,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr4	2818813	2834287	chr4:2818813-2834287	0	+	2820617	2823449	0	14	257,140,103,179,118,71,89,69,655,109,56,82,60,591,	0,1800,4121,4581,5799,6312,8416,8792,10679,12757,13109,13517,14176,14883,
#Partially deleted in new
chr4	2820668	2824782	chr4:2820668-2824782	0	+	2820668	2820668	8553170	4	85,103,179,170,	0,2266,2726,3944,
#Deleted in new
chr4	2824664	2829734	chr4:2824664-2829734	0	+	2824664	2824664	8553170	5	95,71,89,69,242,	0,461,2565,2941,4828,
#Deleted in new
chr4	2824750	2829805	chr4:2824750-2829805	0	+	2824750	2824750	8553170	4	446,89,69,313,	0,2479,2855,4742,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	2826324	2834289	chr4:2826324-2834289	0	+	2826324	2826324	8553170	6	994,69,655,109,490,1300,	0,1281,3168,5246,5598,6665,
#Partially deleted in new
chr4	2826695	2834289	chr4:2826695-2834289	0	+	2826695	2826695	8553170	8	623,69,655,109,56,82,60,593,	0,910,2797,4875,5227,5635,6294,7001,
#Partially deleted in new
chr4	2826849	2833048	chr4:2826849-2833048	0	+	2826849	2826849	8553170	6	469,69,109,56,82,59,	0,756,4721,5073,5481,6140,
#Partially deleted in new
chr4	2829796	2833960	chr4:2829796-2833960	0	+	2829796	2833018	789624	5	351,109,82,60,264,	0,1774,2534,3193,3900,
#Partially deleted in new
chr4	2843856	2930073	chr4:2843856-2930073	3	+	2875915	2928523	789624	15	168,215,163,152,81,150,144,99,177,345,102,90,157,99,1903,	0,32039,38041,40658,50156,50725,54327,54576,55402,60907,63886,64658,71027,82157,84314,
#Partially deleted in new
chr4	2843856	2930073	chr4:2843856-2930073	1	+	2875915	2928171	789624	16	168,215,163,152,81,150,144,99,177,345,102,90,157,99,34,1903,	0,32039,38041,40658,50156,50725,54327,54576,55402,60907,63886,64658,71027,82157,82785,84314,
#Partially deleted in new
chr4	2843856	2900313	chr4:2843856-2900313	0	+	2843856	2843856	8553170	7	168,215,163,152,81,150,2130,	0,32039,38041,40658,50156,50725,54327,
#Partially deleted in new
chr4	2843871	2894684	chr4:2843871-2894684	0	+	2875915	2884529	789624	5	153,215,152,81,103,	0,32024,40643,50141,50710,
#Partially deleted in new
chr4	2843921	2930073	chr4:2843921-2930073	1	+	2875915	2904947	789624	16	103,215,163,152,81,150,144,99,177,14,96,102,90,157,99,1903,	0,31974,37976,40593,50091,50660,54262,54511,55337,60842,60998,63821,64593,70962,82092,84249,
#Partially deleted in new
chr4	2843944	2884569	chr4:2843944-2884569	0	+	2875915	2884569	789624	5	80,158,215,163,55,	0,24027,31951,37953,40570,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	2843952	2854950	chr4:2843952-2854950	0	+	2843952	2843952	8553170	3	72,75,97,	0,9671,10901,
#Partially deleted in new
chr4	2843972	2929307	chr4:2843972-2929307	1	+	2875915	2928171	789624	16	52,215,163,152,81,150,144,99,177,252,102,90,157,99,37,1137,	0,31923,37925,40542,50040,50609,54211,54460,55286,60791,63770,64542,70911,82041,82666,84198,
#Partially deleted in new
chr4	2843978	2899777	chr4:2843978-2899777	0	+	2843978	2843978	8553170	9	46,215,163,152,81,150,144,99,519,	0,31917,37919,40536,50034,50603,54205,54454,55280,
#Partially deleted in new
chr4	2843981	2894733	chr4:2843981-2894733	0	+	2875915	2894733	789624	4	43,215,81,152,	0,31914,50031,50600,
#Partially deleted in new
chr4	2843986	2929327	chr4:2843986-2929327	1	+	2875915	2928171	789624	16	38,215,163,152,81,150,144,99,177,345,102,90,157,99,37,1157,	0,31909,37911,40528,50026,50595,54197,54446,55272,60777,63756,64528,70897,82027,82652,84184,
#Partially deleted in new
chr4	2843988	2876405	chr4:2843988-2876405	0	+	2843988	2843988	8553170	2	36,510,	0,31907,
#Partially deleted in new
chr4	2844149	2930062	chr4:2844149-2930062	1	+	2875915	2928171	789624	18	685,158,215,163,152,81,150,144,99,177,252,102,90,93,157,99,34,1892,	0,23822,31746,37748,40365,49863,50432,54034,54283,55109,60614,63593,64365,65189,70734,81864,82492,84021,
#Partially deleted in new
chr4	2867874	2905721	chr4:2867874-2905721	0	+	2867874	2867874	8553170	10	255,215,163,152,81,150,144,99,177,958,	0,8021,14023,16640,26138,26707,30309,30558,31384,36889,
#Partially deleted in new
chr4	2875895	2928523	chr4:2875895-2928523	1	+	2875915	2928171	789624	15	215,163,152,81,150,144,99,177,345,102,90,157,99,34,353,	0,6002,8619,18117,18686,22288,22537,23363,28868,31847,32619,38988,50118,50746,52275,
#Partially deleted in new
chr4	2875895	2930076	chr4:2875895-2930076	1	+	2875915	2928523	789624	14	215,163,152,81,150,144,99,177,252,102,90,157,99,1906,	0,6002,8619,18117,18686,22288,22537,23363,28868,31847,32619,38988,50118,52275,
#Partially deleted in new
chr4	2881599	2894682	chr4:2881599-2894682	0	+	2881599	2881599	8553170	4	461,152,81,101,	0,2915,12413,12982,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	2887503	2902914	chr4:2887503-2902914	0	+	2887503	2887503	8553170	4	217,81,150,4731,	0,6509,7078,10680,
#Partially deleted in new
chr4	2898430	2928431	chr4:2898430-2928431	0	+	2898430	2928431	789624	8	101,177,345,102,90,157,99,261,	0,828,6333,9312,10084,16453,27583,29740,
#Deleted in new
chr4	2904663	2907813	chr4:2904663-2907813	0	+	2904663	2904663	8553170	2	352,71,	0,3079,
#Partially deleted in new
chr4	2907203	2926100	chr4:2907203-2926100	0	+	2907203	2907203	8553170	4	641,90,157,87,	0,1311,7680,18810,
#Partially deleted in new
chr4	2907376	2930076	chr4:2907376-2930076	0	+	2907376	2907376	8553170	6	468,917,157,99,34,1906,	0,1138,7507,18637,19265,20794,
#Partially deleted in new
chr4	2907829	2928560	chr4:2907829-2928560	0	+	2907829	2928284	789624	4	15,90,99,390,	0,685,18184,20341,
#Partially deleted in new
chr4	2914704	2926137	chr4:2914704-2926137	0	+	2914704	2914704	8553170	2	336,124,	0,11309,
#Partially deleted in new
chr4	2914941	2928346	chr4:2914941-2928346	0	+	2914941	2928284	789624	4	99,99,32,176,	0,11072,11343,13229,
#Deleted in new
chr4	2926308	2928291	chr4:2926308-2928291	0	+	2926308	2926308	8553170	2	367,121,	0,1862,
#Deleted in new
chr4	2928602	2930062	chr4:2928602-2930062	0	+	2928602	2928602	8553170	2	40,467,	0,993,
#Deleted in new
chr4	2930560	2933947	chr4:2930560-2933947	1	-	2930869	2933923	789624	11	590,48,91,109,112,109,162,159,104,97,195,	0,666,814,994,1264,1484,1790,2039,2545,3006,3192,
#Deleted in new
chr4	2930564	2934859	chr4:2930564-2934859	3	-	2930837	2933923	789624	13	389,90,48,91,109,112,109,162,159,104,97,192,91,	0,496,662,810,990,1260,1480,1786,2035,2541,3002,3188,4204,
#Deleted in new
chr4	2930564	2931886	chr4:2930564-2931886	0	-	2930564	2930564	8553170	5	389,90,48,91,332,	0,496,662,810,990,
#Deleted in new
chr4	2930567	2934458	chr4:2930567-2934458	1	-	2930837	2933923	789624	12	386,90,48,91,109,112,109,162,159,104,97,706,	0,493,659,807,987,1257,1477,1783,2032,2538,2999,3185,
#Deleted in new
chr4	2930582	2934816	chr4:2930582-2934816	0	-	2931906	2933923	789624	13	371,90,48,91,109,112,109,59,159,104,97,192,48,	0,478,644,792,972,1242,1462,1768,2017,2523,2984,3170,4186,
#Deleted in new
chr4	2930602	2934815	chr4:2930602-2934815	1	-	2931102	2933923	789624	10	548,109,112,109,162,159,104,97,192,47,	0,952,1222,1442,1748,1997,2503,2964,3150,4166,
#Deleted in new
chr4	2930604	2933997	chr4:2930604-2933997	0	-	2933142	2933923	789624	12	349,90,48,91,109,112,109,162,91,72,97,245,	0,456,622,770,950,1220,1440,1746,1995,2501,2962,3148,
#Deleted in new
chr4	2930610	2934834	chr4:2930610-2934834	1	-	2931102	2933923	789624	12	343,90,48,91,112,109,162,159,104,97,192,66,	0,450,616,764,1214,1434,1740,1989,2495,2956,3142,4158,
#Deleted in new
chr4	2931139	2931936	chr4:2931139-2931936	0	-	2931139	2931139	8553170	2	135,562,	0,235,
#Deleted in new
chr4	2931226	2932698	chr4:2931226-2932698	0	-	2931226	2931226	8553170	5	48,91,329,162,99,	0,148,598,1124,1373,
#Deleted in new
chr4	2932064	2934796	chr4:2932064-2934796	0	-	2932064	2932064	8553170	6	89,162,610,97,192,28,	0,286,535,1502,1688,2704,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	2934898	2947673	chr4:2934898-2947673	1	+	2934898	2934898	8553170	5	837,93,168,100,801,	0,2853,3076,3794,11974,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	2934939	2940504	chr4:2934939-2940504	0	+	2934939	2934939	8553170	5	796,93,168,100,203,	0,2812,3035,3753,5362,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	2935545	2942051	chr4:2935545-2942051	0	+	2935545	2935545	8553170	3	1345,93,1750,	0,2206,4756,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	2935545	2951067	chr4:2935545-2951067	1	+	2935545	2935545	789624	4	2597,100,248,915,	0,3147,11327,14607,
#Partially deleted in new
chr4	2937265	2961738	chr4:2937265-2961738	3	+	2937265	2937265	8553170	4	579,248,404,385,	0,9607,12887,24088,
#Partially deleted in new
chr4	2937594	2946928	chr4:2937594-2946928	0	+	2937594	2937594	8553170	2	250,56,	0,9278,
#Partially deleted in new
chr4	2937650	2940441	chr4:2937650-2940441	0	+	2937650	2937650	8553170	2	194,140,	0,2651,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr4	2937932	2963385	chr4:2937932-2963385	3	-	2938830	2963319	789624	18	998,156,119,148,160,154,102,136,86,131,280,132,123,135,140,142,135,261,	0,1255,1594,3649,4259,6140,7195,8479,9593,10345,12001,13181,14342,15578,16491,18737,19673,25192,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	2937932	2941716	chr4:2937932-2941716	0	-	2937932	2937932	8553170	4	395,54,119,135,	0,1357,1594,3649,
#Partially deleted in new
chr4	2937941	2963368	chr4:2937941-2963368	1	-	2938830	2963319	789624	19	247,119,156,119,148,160,154,102,136,86,131,280,132,123,135,140,142,135,244,	0,870,1246,1585,3640,4250,6131,7186,8470,9584,10336,11992,13172,14333,15569,16482,18728,19664,25183,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr4	2937951	2963356	chr4:2937951-2963356	1	-	2938270	2963319	789624	17	376,111,148,160,154,102,136,86,131,280,132,123,135,140,142,135,232,	0,1583,3630,4240,6121,7176,8460,9574,10326,11982,13162,14323,15559,16472,18718,19654,25173,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr4	2938112	2963333	chr4:2938112-2963333	1	-	2938212	2963319	789624	17	215,107,148,160,154,102,136,86,131,280,132,123,135,140,142,135,209,	0,1426,3469,4079,5960,7015,8299,9413,10165,11821,13001,14162,15398,16311,18557,19493,25012,
#Partially deleted in new
chr4	2963607	3040727	chr4:2963607-3040727	1	+	2964070	3040625	0	14	515,113,78,104,93,64,141,191,38,90,209,138,138,156,	0,25119,28607,40623,44128,46040,50080,56033,58806,64304,65593,71778,73766,76964,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	2963633	2966889	chr4:2963633-2966889	1	+	2964070	2965445	789624	2	489,1647,	0,1609,
#Partially deleted in new
chr4	2963727	3040747	chr4:2963727-3040747	3	+	2964070	3040625	0	16	395,96,113,78,104,93,64,141,191,38,90,209,138,138,138,176,	0,20785,24999,28487,40503,44008,45920,49960,55913,58686,64184,65473,71658,73646,74648,76844,
#Partially deleted in new
chr4	2963820	3040747	chr4:2963820-3040747	1	+	2964070	3040625	0	15	302,113,78,104,93,64,141,191,38,90,209,138,138,138,176,	0,24906,28394,40410,43915,45827,49867,55820,58593,64091,65380,71565,73553,74555,76751,
#Partially deleted in new
chr4	2963820	3040747	chr4:2963820-3040747	1	+	2964070	3040625	0	15	302,96,113,78,104,93,64,141,191,38,90,209,138,138,176,	0,20692,24906,28394,40410,43915,45827,49867,55820,58593,64091,65380,71565,73553,76751,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	2969168	2971192	chr4:2969168-2971192	0	+	2969168	2969168	8553170	2	149,245,	0,1779,
#Partially deleted in new
chr4	3022411	3040747	chr4:3022411-3040747	0	+	3022411	3022411	8553170	4	40,90,209,176,	0,5500,6789,18160,
#Partially deleted in new
chr4	3027910	3038878	chr4:3027910-3038878	0	+	3027910	3027910	8553170	5	91,209,138,138,255,	0,1290,9463,10465,10713,
#Partially deleted in new
chr4	3027910	3040747	chr4:3027910-3040747	0	+	3027910	3027910	8553170	4	91,209,138,176,	0,1290,9463,12661,
#Partially deleted in new
chr4	3029322	3038578	chr4:3029322-3038578	0	+	3029322	3029322	8553170	3	87,138,203,	0,8051,9053,
#Partially deleted in new
chr4	3041421	3073479	chr4:3041421-3073479	0	+	3041421	3041421	8553170	4	824,217,161,122,	0,21054,29814,31936,
#Partially deleted in new
chr4	3041561	3087022	chr4:3041561-3087022	0	+	3041561	3041561	8553170	3	186,317,84,	0,367,45377,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	3044100	3044207	chr4:3044100-3044207	3	+	3044100	3044100	8553170	1	107,	0,
#Partially deleted in new
chr4	3063470	3074514	chr4:3063470-3074514	3	-	3063470	3063470	789624	3	230,196,89,	0,6507,10955,
#Deleted in new
chr4	3063471	3063701	chr4:3063471-3063701	3	+	3063471	3063471	8553170	1	230,	0,
#Deleted in new
chr4	3069976	3070151	chr4:3069976-3070151	3	+	3069976	3069976	8553170	1	175,	0,
#Partially deleted in new
chr4	3074680	3243960	chr4:3074680-3243960	3	+	3074825	3240059	0	67	408,84,121,60,80,139,142,179,205,48,81,341,124,119,112,138,159,98,140,64,101,147,121,77,152,203,127,128,111,78,224,79,162,56,149,137,117,123,236,143,208,142,180,177,77,139,123,214,146,178,102,188,127,101,155,140,83,131,130,156,191,115,214,106,163,161,4115,	0,12258,24593,29143,30676,32604,40623,41404,46547,48208,50868,52583,55243,55624,56605,56957,57881,58133,59720,61223,61545,65829,68085,70471,72116,73324,79612,82391,85601,97639,98227,100040,100265,102651,103617,105834,107673,111916,112970,114270,125051,129326,131815,132126,132600,134092,135146,137248,137883,139277,140429,143084,145501,147706,148725,149311,150980,153934,154199,155206,158482,160603,160884,161468,163766,164137,165165,
#Partially deleted in new
chr4	3112863	3115445	chr4:3112863-3115445	0	+	3112863	3112863	8553170	2	189,142,	0,2440,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	3115328	3121712	chr4:3115328-3121712	0	+	3115328	3115328	8553170	3	117,179,485,	0,756,5899,
#Partially deleted in new
chr4	3121399	3123466	chr4:3121399-3123466	0	+	3121399	3121399	8553170	2	33,578,	0,1489,
#Boundary problem: need 53, got 0, diff 53, mapped 0.0
chr4	3128338	3243940	chr4:3128338-3243940	0	+	3128338	3128338	8553170	53	2085,112,138,159,98,140,64,101,147,121,77,152,203,127,128,111,78,224,79,162,56,149,137,117,123,1443,208,142,180,177,72,109,123,214,146,178,102,188,127,101,155,140,83,131,130,156,191,115,214,106,163,161,4095,	0,2947,3299,4223,4475,6062,7565,7887,12171,14427,16813,18458,19666,25954,28733,31943,43981,44569,46382,46607,48993,49959,52176,54015,58258,59312,71393,75668,78157,78468,78947,80464,81488,83590,84225,85619,86771,89426,91843,94048,95067,95653,97322,100276,100541,101548,104824,106945,107226,107810,110108,110479,111507,
#Deleted in new
chr4	3129923	3130423	chr4:3129923-3130423	0	+	3129923	3130423	8553170	2	76,119,	0,381,
#Partially deleted in new
chr4	3140509	3142886	chr4:3140509-3142886	0	+	3140509	3142886	8553170	2	147,142,	0,2235,
#Partially deleted in new
chr4	3160361	3173227	chr4:3160361-3173227	0	+	3160361	3173135	789624	3	31,78,320,	0,11958,12546,
#Partially deleted in new
chr4	3172907	3174799	chr4:3172907-3174799	0	+	3172907	3173135	8553170	2	424,79,	0,1813,
#Partially deleted in new
chr4	3172907	3174799	chr4:3172907-3174799	0	+	3172907	3173135	8553170	2	311,79,	0,1813,
#Partially deleted in new
chr4	3178346	3180794	chr4:3178346-3180794	0	+	3178346	3178346	8553170	2	100,280,	0,2168,
#Partially deleted in new
chr4	3178346	3180787	chr4:3178346-3180787	0	+	3178346	3178346	8553170	2	100,273,	0,2168,
#Partially deleted in new
chr4	3178346	3180673	chr4:3178346-3180673	0	+	3178346	3178346	8553170	2	100,159,	0,2168,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	3199731	3206579	chr4:3199731-3206579	0	+	3199731	3206579	8553170	4	208,90,142,84,	0,3245,4275,6764,
#Deleted in new
chr4	3211911	3213055	chr4:3211911-3213055	0	+	3211911	3211911	8553170	2	231,492,	0,652,
#Deleted in new
chr4	3228644	3229922	chr4:3228644-3229922	0	+	3228644	3228644	8553170	2	365,36,	0,1242,
#Partially deleted in new
chr4	3228712	3235396	chr4:3228712-3235396	0	+	3228712	3228712	8553170	4	33,130,156,113,	0,167,1174,6571,
#Deleted in new
chr4	3235423	3236179	chr4:3235423-3236179	0	+	3235423	3235423	8553170	2	355,31,	0,725,
#Partially deleted in new
chr4	3244368	3256613	chr4:3244368-3256613	3	+	3246654	3255965	789624	6	356,422,81,265,276,889,	0,633,2221,4909,8838,11356,
#Partially deleted in new
chr4	3247475	3256303	chr4:3247475-3256303	1	+	3249222	3255965	789624	3	2067,276,579,	0,5731,8249,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	3249039	3271738	chr4:3249039-3271738	0	+	3249222	3263959	789624	6	503,276,133,177,136,1939,	0,4167,6685,14845,18720,20760,
#Partially deleted in new
chr4	3249158	3262541	chr4:3249158-3262541	1	+	3249222	3261424	789624	4	384,276,169,1210,	0,4048,6566,12173,
#Partially deleted in new
chr4	3293027	3418119	chr4:3293027-3418119	0	+	3293027	3293027	8553170	8	72,117,22,170,93,144,180,732,	0,49909,93388,121044,121724,122950,123885,124360,
#Deleted in new
chr4	3312511	3312835	chr4:3312511-3312835	7	+	3312511	3312511	16724991	1	324,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	3312816	3313058	chr4:3312816-3313058	5	+	3312816	3312816	16724991	1	242,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr4	3314146	3439905	chr4:3314146-3439905	3	+	3316170	3439684	0	18	803,1982,117,22,170,93,144,180,154,77,195,74,127,97,80,154,549,451,	0,1923,28790,72269,99925,100605,101831,102766,103241,106495,108229,108758,109368,111317,113943,114411,116260,125308,
#Partially deleted in new
chr4	3316067	3439911	chr4:3316067-3439911	1	+	3316170	3439684	0	17	1984,117,22,170,93,144,180,154,77,195,74,127,97,80,154,549,457,	0,26869,70348,98004,98684,99910,100845,101320,104574,106308,106837,107447,109396,112022,112490,114339,123387,
#Partially deleted in new
chr4	3316067	3432250	chr4:3316067-3432250	1	+	3316170	3430972	0	16	1984,117,22,170,93,144,180,154,77,195,74,127,97,80,154,1844,	0,26869,70348,98004,98684,99910,100845,101320,104574,106308,106837,107447,109396,112022,112490,114339,
#Partially deleted in new
chr4	3316067	3343189	chr4:3316067-3343189	0	+	3316067	3316067	8553170	2	1984,253,	0,26869,
#Partially deleted in new
chr4	3316067	3417450	chr4:3316067-3417450	0	+	3316170	3414077	789624	7	1984,117,170,93,144,180,63,	0,26869,98004,98684,99910,100845,101320,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	3318038	3378591	chr4:3318038-3378591	0	+	3318038	3318038	8553170	3	13,117,422,	0,24898,60131,
#Deleted in new
chr4	3323976	3324762	chr4:3323976-3324762	7	-	3323976	3323976	16724991	1	786,	0,
#Partially deleted in new
chr4	3342414	3416121	chr4:3342414-3416121	0	+	3342414	3342414	8553170	6	164,117,22,170,93,144,	0,522,44001,71657,72337,73563,
#Partially deleted in new
chr4	3369878	3439905	chr4:3369878-3439905	1	+	3370267	3439684	0	16	443,22,170,93,144,180,154,77,195,74,127,97,80,154,549,451,	0,16537,44193,44873,46099,47034,47509,50763,52497,53026,53636,55585,58211,58679,60528,69576,
#Partially deleted in new
chr4	3370185	3418267	chr4:3370185-3418267	0	+	3370185	3370185	8553170	7	136,22,170,93,144,180,880,	0,16230,43886,44566,45792,46727,47202,
#Partially deleted in new
chr4	3385145	3428598	chr4:3385145-3428598	0	+	3385145	3385145	8553170	13	279,22,170,93,144,180,154,77,195,74,127,97,509,	0,1270,28926,29606,30832,31767,32242,35496,37230,37759,38369,40318,42944,
#Partially deleted in new
chr4	3385603	3414242	chr4:3385603-3414242	0	+	3385603	3385603	8553170	3	48,22,171,	0,812,28468,
#Partially deleted in new
chr4	3385680	3414241	chr4:3385680-3414241	0	+	3385680	3385680	8553170	3	136,22,170,	0,735,28391,
#Partially deleted in new
chr4	3385698	3414844	chr4:3385698-3414844	0	+	3385698	3385698	8553170	4	95,22,170,93,	0,717,28373,29053,
#Partially deleted in new
chr4	3385970	3439905	chr4:3385970-3439905	0	+	3385970	3385970	8553170	14	467,773,144,180,154,77,195,74,127,97,80,154,549,451,	0,28101,30007,30942,31417,34671,36405,36934,37544,39493,42119,42587,44436,53484,
#Deleted in new
chr4	3407354	3414224	chr4:3407354-3414224	0	+	3407488	3414224	789624	2	219,153,	0,6717,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	3412985	3419510	chr4:3412985-3419510	0	+	3412985	3412985	8553170	5	1256,93,144,180,2141,	0,1766,2992,3927,4384,
#Partially deleted in new
chr4	3413228	3428475	chr4:3413228-3428475	0	+	3413228	3413228	8553170	12	475,170,93,144,180,154,77,195,74,127,97,386,	0,843,1523,2749,3684,4159,7413,9147,9676,10286,12235,14861,
#Partially deleted in new
chr4	3417512	3428137	chr4:3417512-3428137	0	+	3417512	3417512	8553170	8	29,77,195,74,127,97,149,48,	0,3129,4863,5392,6002,7951,9093,10577,
#Deleted in new
chr4	3420387	3422524	chr4:3420387-3422524	0	+	3420387	3420387	8553170	2	331,149,	0,1988,
#Deleted in new
chr4	3422514	3423865	chr4:3422514-3423865	0	+	3422514	3422514	8553170	3	56,74,351,	0,390,1000,
#Partially deleted in new
chr4	3422534	3430447	chr4:3422534-3430447	0	+	3422534	3422534	8553170	6	36,74,127,97,80,41,	0,370,980,2929,5555,7872,
#Deleted in new
chr4	3422534	3423641	chr4:3422534-3423641	0	+	3422534	3422534	8553170	3	36,74,127,	0,370,980,
#Partially deleted in new
chr4	3422552	3428142	chr4:3422552-3428142	0	+	3422552	3422552	8553170	5	18,74,127,115,53,	0,352,962,2893,5537,
#Deleted in new
chr4	3422929	3423641	chr4:3422929-3423641	0	+	3422929	3422929	8553170	2	49,127,	0,585,
#Partially deleted in new
chr4	3428088	3439913	chr4:3428088-3439913	0	+	3428088	3428088	8553170	2	81,459,	0,11366,
#Deleted in new
chr4	3441886	3449495	chr4:3441886-3449495	3	+	3442001	3449419	0	14	232,181,97,80,123,132,111,175,86,253,140,141,149,259,	0,845,1163,1454,2152,2424,2736,2932,3378,4155,5605,6008,6241,7350,
#Deleted in new
chr4	3441974	3449419	chr4:3441974-3449419	1	+	3442001	3449419	789624	15	144,181,97,80,123,132,111,175,86,21,253,140,141,149,183,	0,757,1075,1366,2064,2336,2648,2844,3290,3901,4067,5517,5920,6153,7262,
#Deleted in new
chr4	3444348	3449435	chr4:3444348-3449435	0	+	3444348	3444348	8553170	9	94,111,175,632,253,140,141,149,199,	0,274,470,916,1693,3143,3546,3779,4888,
#Deleted in new
chr4	3445899	3448194	chr4:3445899-3448194	0	+	3445899	3445899	8553170	4	395,140,141,67,	0,1592,1995,2228,
#Partially deleted in new
chr4	3463310	3494483	chr4:3463310-3494483	3	+	3463375	3493501	789624	7	119,46,231,201,120,120,1725,	0,195,10095,13031,22228,26366,29448,
#Partially deleted in new
chr4	3463310	3492888	chr4:3463310-3492888	0	+	3463310	3463310	8553170	5	119,46,120,120,130,	0,195,22228,26366,29448,
#Partially deleted in new
chr4	3463310	3494483	chr4:3463310-3494483	1	+	3463375	3492765	789624	7	119,46,231,190,120,120,1725,	0,195,10095,13031,22228,26366,29448,
#Partially deleted in new
chr4	3463310	3476543	chr4:3463310-3476543	0	+	3463310	3463310	8553170	3	119,231,202,	0,10095,13031,
#Partially deleted in new
chr4	3463310	3501473	chr4:3463310-3501473	1	+	3463375	3500825	789624	8	119,46,120,120,725,43,153,782,	0,195,22228,26366,29448,33509,36940,37381,
#Deleted in new
chr4	3484543	3494481	chr4:3484543-3494481	1	+	3492916	3493501	789624	4	300,120,120,1723,	0,995,5133,8215,
#Deleted in new
chr4	3485348	3492885	chr4:3485348-3492885	0	+	3485348	3485348	8553170	3	310,120,127,	0,4328,7410,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	3503596	3532559	chr4:3503596-3532559	3	-	3512973	3532412	0	8	9440,177,83,159,121,122,145,351,	0,11155,12519,14437,15274,16475,21310,28612,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	3503611	3532422	chr4:3503611-3532422	1	-	3512973	3532412	8553170	8	9425,177,83,159,121,122,145,214,	0,11140,12504,14422,15259,16460,21295,28597,
#Partially deleted in new
chr4	3512932	3532149	chr4:3512932-3532149	0	-	3512932	3512932	789624	8	104,177,83,159,121,122,145,167,	0,1819,3183,5101,5938,7139,11974,19050,
#Partially deleted in new
chr4	3514846	3532420	chr4:3514846-3532420	0	-	3516629	3532412	8553170	8	82,83,332,159,121,122,145,212,	0,1269,1540,3187,4024,5225,10060,17362,
#Partially deleted in new
chr4	3515881	3532416	chr4:3515881-3532416	0	-	3525032	3532412	789624	6	317,159,121,122,240,208,	0,2152,2989,4190,9025,16327,
#Partially deleted in new
chr4	3517660	3532422	chr4:3517660-3532422	0	-	3517660	3517660	8553170	5	532,121,158,145,214,	0,1210,2411,7246,14548,
#Partially deleted in new
chr4	3523392	3532446	chr4:3523392-3532446	0	-	3523392	3523392	8553170	3	109,145,238,	0,1514,8816,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	3544554	3548588	chr4:3544554-3548588	3	+	3544554	3544554	8553170	3	369,135,128,	0,540,3906,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	3544887	3548796	chr4:3544887-3548796	1	+	3544887	3544887	8553170	5	36,135,179,122,122,	0,207,1282,3573,3787,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	3576868	3590004	chr4:3576868-3590004	3	+	3576868	3576868	789624	3	255,176,1071,	0,11006,12065,
#Partially deleted in new
chr4	3576933	3590711	chr4:3576933-3590711	0	+	3576933	3576933	8553170	4	190,137,81,448,	0,11117,12000,13330,
#Partially deleted in new
chr4	3633028	3633975	chr4:3633028-3633975	3	+	3633028	3633028	8553170	2	218,248,	0,699,
#Deleted in new
chr4	3673592	3677855	chr4:3673592-3677855	3	-	3673592	3673592	5263520	3	269,79,685,	0,3010,3578,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	3758747	3763390	chr4:3758747-3763390	3	-	3758747	3758747	8553170	2	1279,3246,	0,1397,
#Deleted in new
chr4	3766347	3768491	chr4:3766347-3768491	1	+	3766606	3768275	789624	2	1269,331,	0,1813,
#Deleted in new
chr4	3766397	3768526	chr4:3766397-3768526	3	+	3766606	3767995	789624	1	2129,	0,
#Deleted in new
chr4	3889355	3890249	chr4:3889355-3890249	7	-	3889355	3889355	16724991	1	894,	0,
#Deleted in new
chr4	3901565	3902594	chr4:3901565-3902594	7	-	3901565	3901565	16724991	1	1029,	0,
#Deleted in new
chr4	3910282	3910604	chr4:3910282-3910604	7	+	3910282	3910282	16724991	1	322,	0,
#Partially deleted in new
chr4	3915182	3955419	chr4:3915182-3955419	3	-	3915182	3915182	8553170	6	90,81,155,197,63,96,	0,2638,6445,8888,37928,40141,
#Partially deleted in new
chr4	3915186	3924274	chr4:3915186-3924274	7	-	3915186	3915186	16724991	4	86,81,159,204,	0,2634,6437,8884,
#Partially deleted in new
chr4	3935446	3942519	chr4:3935446-3942519	7	+	3935446	3935446	16724991	8	113,122,39,60,111,117,76,130,	0,853,1160,1840,3099,4748,5871,6943,
#Partially deleted in new
chr4	3941759	3955415	chr4:3941759-3955415	7	-	3941759	3941759	16724991	4	1613,1077,63,92,	0,5384,11351,13564,
#Partially deleted in new
chr4	3942766	3955394	chr4:3942766-3955394	4	-	3942766	3942766	16724991	6	606,314,81,63,74,71,	0,3859,8372,10344,12193,12557,
#Partially deleted in new
chr4	3942851	3955363	chr4:3942851-3955363	4	-	3942851	3942851	16724991	3	521,63,40,	0,10259,12472,
#Partially deleted in new
chr4	3942910	3955408	chr4:3942910-3955408	4	-	3942910	3942910	16724991	4	462,131,63,85,	0,5179,10200,12413,
#Partially deleted in new
chr4	3943273	3955419	chr4:3943273-3955419	5	-	3943273	3943273	16724991	8	99,149,266,131,102,81,63,96,	0,3495,4468,4816,6174,7865,9837,12050,
#Partially deleted in new
chr4	3947498	3953176	chr4:3947498-3953176	4	-	3947498	3947498	16724991	3	722,81,66,	0,3640,5612,
#Partially deleted in new
chr4	3947523	3953165	chr4:3947523-3953165	4	-	3947523	3947523	16724991	4	484,131,81,55,	0,566,3615,5587,
#Partially deleted in new
chr4	3947904	3955043	chr4:3947904-3955043	4	-	3947904	3947904	16724991	5	103,131,81,63,84,	0,185,3234,5206,7055,
#Partially deleted in new
chr4	3948176	3955392	chr4:3948176-3955392	4	-	3948176	3948176	16724991	5	44,145,81,63,69,	0,1271,2962,4934,7147,
#Deleted in new
chr4	3967033	3967660	chr4:3967033-3967660	7	-	3967033	3967033	16724991	1	627,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	4048210	4107583	chr4:4048210-4107583	7	-	4048210	4048210	16724991	2	1972,304,	0,59069,
#Partially deleted in new
chr4	4076710	4077491	chr4:4076710-4077491	7	-	4076710	4076710	16724991	1	781,	0,
#Deleted in new
chr4	4086637	4086814	chr4:4086637-4086814	7	+	4086637	4086637	16724991	1	177,	0,
#Deleted in new
chr4	4107279	4107497	chr4:4107279-4107497	5	-	4107279	4107279	16724991	1	218,	0,
#Deleted in new
chr4	4117924	4118284	chr4:4117924-4118284	7	-	4117924	4117924	16724991	1	360,	0,
#Deleted in new
chr4	4126658	4127569	chr4:4126658-4127569	7	-	4126658	4126658	16724991	1	911,	0,
#Partially deleted in new
chr4	4143457	4150421	chr4:4143457-4150421	7	-	4143457	4143457	16724991	4	310,118,274,45,	0,2125,4063,6919,
#Deleted in new
chr4	4156521	4157443	chr4:4156521-4157443	7	-	4156521	4156521	16724991	1	922,	0,
#Deleted in new
chr4	4174318	4175238	chr4:4174318-4175238	7	-	4174318	4174318	16724991	1	920,	0,
#Partially deleted in new
chr4	4188802	4226889	chr4:4188802-4226889	3	-	4188802	4226864	789624	6	171,938,131,59,137,428,	0,8363,13645,17269,24065,37659,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	4235541	4248212	chr4:4235541-4248212	1	-	4237835	4247625	789624	5	715,109,159,142,612,	0,2285,4779,10660,12059,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	4235552	4248212	chr4:4235552-4248212	3	-	4237835	4248202	789624	5	704,109,159,142,107,	0,2274,4768,10649,12553,
#Partially deleted in new
chr4	4267700	4290169	chr4:4267700-4290169	3	-	4267888	4283742	789624	10	323,86,87,403,84,108,115,175,54,134,	0,829,5882,6666,11746,11941,14082,15920,18818,22335,
#Deleted in new
chr4	4267700	4268932	chr4:4267700-4268932	0	-	4267700	4267700	8553170	2	323,403,	0,829,
#Partially deleted in new
chr4	4267703	4290021	chr4:4267703-4290021	1	-	4267888	4283742	789624	10	320,86,87,403,84,108,115,175,54,36,	0,826,5879,6663,11743,11938,14079,15917,18815,22282,
#Partially deleted in new
chr4	4281782	4290038	chr4:4281782-4290038	0	-	4281782	4283742	789624	4	115,175,54,436,	0,1838,4736,7820,
#Partially deleted in new
chr4	4290250	4321786	chr4:4290250-4321786	3	+	4299945	4321316	789624	8	102,171,1103,47,74,83,162,1147,	0,9676,11738,15887,22790,25385,25558,30389,
#Partially deleted in new
chr4	4290250	4321786	chr4:4290250-4321786	0	+	4299945	4302593	789624	7	102,171,781,74,83,162,1147,	0,9676,12060,22790,25385,25558,30389,
#Partially deleted in new
chr4	4290250	4321398	chr4:4290250-4321398	0	+	4299945	4315832	789624	6	102,171,1103,83,162,759,	0,9676,11738,25385,25558,30389,
#Partially deleted in new
chr4	4290268	4302274	chr4:4290268-4302274	0	+	4299945	4302274	789624	3	45,171,286,	0,9658,11720,
#Partially deleted in new
chr4	4302626	4320697	chr4:4302626-4320697	0	+	4302626	4320697	789624	2	465,58,	0,18013,
#Partially deleted in new
chr4	4302731	4320697	chr4:4302731-4320697	0	+	4302731	4313048	789624	3	360,74,58,	0,10309,17908,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	4321961	4334182	chr4:4321961-4334182	3	+	4321961	4321961	8553170	3	584,68,764,	0,7884,11457,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	4348139	4419058	chr4:4348139-4419058	3	+	4387629	4417435	789624	9	332,91,142,83,1317,155,117,111,1824,	0,32843,36920,37333,37717,39464,43335,61433,69095,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	4348312	4419058	chr4:4348312-4419058	1	+	4387629	4417435	789624	8	159,83,787,55,155,117,111,1824,	0,37160,37544,38806,39291,43162,61260,68922,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	4380981	4381972	chr4:4380981-4381972	0	+	4380981	4380981	8553170	2	92,98,	0,893,
#Partially deleted in new
chr4	4380981	4385257	chr4:4380981-4385257	0	+	4380981	4380981	8553170	2	92,198,	0,4078,
#Partially deleted in new
chr4	4385080	4417620	chr4:4385080-4417620	1	+	4387629	4417435	789624	6	121,83,155,117,111,386,	0,392,2523,6394,24492,32154,
#Partially deleted in new
chr4	4385444	4417483	chr4:4385444-4417483	1	+	4387629	4417435	789624	6	111,55,155,117,111,249,	0,1674,2159,6030,24128,31790,
#Partially deleted in new
chr4	4386255	4419058	chr4:4386255-4419058	1	+	4387629	4417435	789624	6	388,55,155,117,111,1824,	0,863,1348,5219,23317,30979,
#Partially deleted in new
chr4	4386537	4418999	chr4:4386537-4418999	1	+	4387629	4417435	789624	5	106,155,117,111,1765,	0,1066,4937,23035,30697,
#Partially deleted in new
chr4	4387038	4419058	chr4:4387038-4419058	0	+	4387629	4417435	789624	6	135,155,117,111,693,275,	0,565,4436,22534,30196,31745,
#Partially deleted in new
chr4	4387038	4419055	chr4:4387038-4419055	1	+	4387629	4417435	789624	6	135,155,117,111,693,272,	0,565,4436,22534,30196,31745,
#Partially deleted in new
chr4	4387104	4417879	chr4:4387104-4417879	1	+	4387629	4417435	789624	4	69,155,111,645,	0,499,22468,30130,
#Partially deleted in new
chr4	4415741	4542010	chr4:4415741-4542010	1	-	4416148	4541964	789624	11	422,81,70,59,89,116,67,78,116,68,214,	0,5122,7776,9422,19028,22652,41449,41681,43630,55897,126055,
#Partially deleted in new
chr4	4418967	4542028	chr4:4418967-4542028	3	-	4420033	4541964	789624	11	1162,81,70,59,89,116,67,78,116,68,232,	0,1896,4550,6196,15802,19426,38223,38455,40404,52671,122829,
#Partially deleted in new
chr4	4418967	4426613	chr4:4418967-4426613	0	-	4418967	4418967	8553170	3	1977,70,1450,	0,4550,6196,
#Partially deleted in new
chr4	4419333	4423823	chr4:4419333-4423823	0	-	4419333	4419333	8553170	3	796,81,306,	0,1530,4184,
#Partially deleted in new
chr4	4419942	4461937	chr4:4419942-4461937	0	-	4419942	4419942	8553170	9	187,81,70,89,116,67,78,116,36,	0,921,3575,14827,18451,37248,37480,39429,41959,
#Partially deleted in new
chr4	4420094	4425649	chr4:4420094-4425649	0	-	4420094	4420094	8553170	4	35,81,70,486,	0,769,3423,5069,
#Partially deleted in new
chr4	4420220	4423688	chr4:4420220-4423688	0	-	4420220	4420220	8553170	2	724,171,	0,3297,
#Partially deleted in new
chr4	4425160	4461954	chr4:4425160-4461954	0	-	4425160	4425160	8553170	7	62,89,116,67,78,116,49,	0,9609,13233,32030,32262,34211,36745,
#Partially deleted in new
chr4	4425172	4542346	chr4:4425172-4542346	0	-	4425172	4459480	789624	8	50,89,116,67,78,116,68,187,	0,9597,13221,32018,32250,34199,46466,116987,
#Partially deleted in new
chr4	4438438	4542031	chr4:4438438-4542031	0	-	4438438	4438438	8553170	5	71,310,116,68,235,	0,18752,20933,33200,103358,
#Partially deleted in new
chr4	4476120	4481700	chr4:4476120-4481700	3	-	4476120	4476120	789624	4	24,114,308,96,	0,1763,2546,5484,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	4507077	4507777	chr4:4507077-4507777	7	+	4507077	4507077	16724991	2	55,529,	0,171,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	4542130	4544907	chr4:4542130-4544907	0	+	4542130	4542130	8553170	2	495,170,	0,2607,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	4542142	4560559	chr4:4542142-4560559	0	+	4542142	4542142	8553170	3	333,170,166,	0,2595,18251,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	4542198	4591175	chr4:4542198-4591175	0	+	4542198	4542198	8553170	3	277,170,102,	0,2539,48875,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	4542203	4710938	chr4:4542203-4710938	3	+	4542203	4542203	789624	6	272,170,133,170,238,1423,	0,2534,106773,107169,163469,167312,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	4542239	4637904	chr4:4542239-4637904	0	+	4542239	4542239	8553170	3	187,170,367,	0,2498,95298,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	4542417	4545060	chr4:4542417-4545060	0	+	4542417	4542417	8553170	2	208,323,	0,2320,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	4649423	4708600	chr4:4649423-4708600	1	+	4649423	4649423	8553170	2	119,2928,	0,56249,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	4820404	4821452	chr4:4820404-4821452	3	+	4820404	4820404	8553170	1	1048,	0,
#Partially deleted in new
chr4	4844436	4850827	chr4:4844436-4850827	3	+	4844436	4844436	789624	4	118,102,186,121,	0,2002,2887,6270,
#Deleted in new
chr4	4859665	4863936	chr4:4859665-4863936	3	+	4859899	4863143	789624	2	703,1236,	0,3035,
#Deleted in new
chr4	4862427	4863028	chr4:4862427-4863028	0	+	4862427	4862427	8553170	2	181,328,	0,273,
#Partially deleted in new
chr4	4894181	4895173	chr4:4894181-4895173	7	-	4894181	4894181	16724991	1	992,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	4920769	4921064	chr4:4920769-4921064	3	-	4920769	4920769	8553170	1	295,	0,
#Partially deleted in new
chr4	5014585	5019472	chr4:5014585-5019472	3	-	5015150	5019445	789624	4	649,129,45,180,	0,2250,2549,4707,
#Partially deleted in new
chr4	5014826	5019437	chr4:5014826-5019437	0	-	5015150	5019437	789624	2	408,145,	0,4466,
#Partially deleted in new
chr4	5015143	5019441	chr4:5015143-5019441	0	-	5015150	5019441	789624	3	91,45,149,	0,1991,4149,
#Partially deleted in new
chr4	5051441	5500998	chr4:5051441-5500998	3	+	5051863	5499083	789624	12	474,56,152,174,38,90,104,117,126,132,65,2054,	0,88463,116857,279778,346765,365403,395231,405365,408661,415261,416564,447503,
#Partially deleted in new
chr4	5051595	5499449	chr4:5051595-5499449	0	+	5051863	5140244	789624	13	320,56,110,152,174,38,90,104,117,126,132,65,505,	0,88309,88601,116703,279624,346611,365249,395077,405211,408507,415107,416410,447349,
#Partially deleted in new
chr4	5139559	5500994	chr4:5139559-5500994	1	+	5168331	5499083	789624	11	258,56,152,174,38,104,117,126,132,65,2050,	0,345,28739,191660,258647,307113,317247,320543,327143,328446,359385,
#Partially deleted in new
chr4	5139635	5500988	chr4:5139635-5500988	1	+	5168331	5499083	789624	12	143,56,152,174,38,90,104,117,126,132,65,2044,	0,269,28663,191584,258571,277209,307037,317171,320467,327067,328370,359309,
#Partially deleted in new
chr4	5204078	5345455	chr4:5204078-5345455	0	+	5204078	5204078	8553170	3	158,174,128,	0,127141,141249,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	5214241	5468070	chr4:5214241-5468070	0	+	5214241	5214241	8553170	8	56,174,38,90,117,126,132,65,	0,116978,183965,202603,242565,245861,252461,253764,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	5426884	5426984	chr4:5426884-5426984	3	-	5426884	5426884	8553170	1	100,	0,
#Partially deleted in new
chr4	5432285	5447330	chr4:5432285-5447330	0	+	5432285	5432285	8553170	3	85,230,658,	0,3418,14387,
#Partially deleted in new
chr4	5437916	5499114	chr4:5437916-5499114	0	+	5437916	5437916	8553170	7	163,104,117,126,132,65,170,	0,8756,18890,22186,28786,30089,61028,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	5458580	5458881	chr4:5458580-5458881	3	-	5458580	5458580	8553170	1	301,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	5524568	5527595	chr4:5524568-5527595	0	+	5524568	5524568	789624	4	160,90,118,208,	0,838,1647,2819,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	5525155	5527801	chr4:5525155-5527801	3	+	5525155	5525155	789624	3	341,118,414,	0,1060,2232,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	5525389	5527800	chr4:5525389-5527800	0	+	5525389	5525389	8553170	3	107,139,413,	0,805,1998,
#Partially deleted in new
chr4	5527151	5527801	chr4:5527151-5527801	0	+	5527151	5527151	8553170	2	110,414,	0,236,
#Partially deleted in new
chr4	5542771	5709548	chr4:5542771-5709548	0	-	5543130	5697635	789624	23	138,167,102,197,88,215,228,123,205,455,160,176,240,325,140,135,54,110,187,69,167,55,720,	0,274,22486,25672,31913,33468,41851,72650,75706,79765,82977,85787,89021,97742,120335,122743,138488,142598,146385,148493,151563,154821,166057,
#Partially deleted in new
chr4	5562438	5709548	chr4:5562438-5709548	1	-	5562847	5697635	789624	22	677,102,197,88,215,228,123,205,455,160,176,240,325,140,135,54,110,187,69,167,55,720,	0,2819,6005,12246,13801,22184,52983,56039,60098,63310,66120,69354,78075,100668,103076,118821,122931,126718,128826,131896,135154,146390,
#Partially deleted in new
chr4	5562438	5708567	chr4:5562438-5708567	3	-	5562847	5708513	789624	22	677,102,197,88,215,228,123,205,455,160,176,240,325,140,135,54,110,187,69,167,55,282,	0,2819,6005,12246,13801,22184,52983,56039,60098,63310,66120,69354,78075,100668,103076,118821,122931,126718,128826,131896,135154,145847,
#Partially deleted in new
chr4	5562788	5709063	chr4:5562788-5709063	0	-	5631895	5697635	789624	23	327,102,197,88,215,228,123,205,455,160,176,240,317,140,135,54,110,187,69,167,55,94,235,	0,2469,5655,11896,13451,21834,52633,55689,59748,62960,65770,69004,77733,100318,102726,118471,122581,126368,128476,131546,134804,145258,146040,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr4	5711196	5814305	chr4:5711196-5814305	3	+	5711380	5811037	789624	21	358,126,84,233,85,99,138,159,217,149,99,213,110,211,207,145,112,127,94,112,3353,	0,8051,18110,20228,22154,30519,34007,36951,41639,42588,45067,72355,82411,85825,87389,90753,93533,97004,98321,99142,99756,
#Partially deleted in new
chr4	5748083	5888471	chr4:5748083-5888471	0	-	5748083	5748083	8553170	13	229,166,180,171,142,157,121,69,81,62,165,89,244,	0,77410,80405,87831,88681,91438,93224,95009,101308,103324,108059,118584,140144,
#Deleted in new
chr4	5752674	5753929	chr4:5752674-5753929	0	+	5752674	5752674	8553170	2	378,145,	0,1110,
#Partially deleted in new
chr4	5793513	5797405	chr4:5793513-5797405	0	+	5793513	5793513	8553170	2	204,384,	0,3508,
#Partially deleted in new
chr4	5793607	5801807	chr4:5793607-5801807	0	+	5793607	5793607	8553170	4	110,211,207,58,	0,3414,4978,8142,
#Partially deleted in new
chr4	5820763	5893058	chr4:5820763-5893058	1	-	5821759	5892969	0	14	1088,166,180,171,142,157,121,69,81,62,165,185,89,470,	0,4730,7725,15151,16001,18758,20544,22329,28628,30644,35379,40262,45904,71825,
#Partially deleted in new
chr4	5820782	5888481	chr4:5820782-5888481	3	-	5821759	5888266	0	14	1069,166,180,171,142,157,121,69,81,62,165,185,89,254,	0,4711,7706,15132,15982,18739,20525,22310,28609,30625,35360,40243,45885,67445,
#Partially deleted in new
chr4	5820783	5887813	chr4:5820783-5887813	0	-	5820783	5820783	8553170	14	1068,166,180,171,142,157,121,69,81,62,165,185,89,425,	0,4710,7705,15131,15981,18738,20524,22309,28608,30624,35359,40242,45884,66605,
#Partially deleted in new
chr4	5820783	5826861	chr4:5820783-5826861	0	-	5820783	5820783	8553170	2	1068,1368,	0,4710,
#Partially deleted in new
chr4	5821242	5890191	chr4:5821242-5890191	1	-	5821759	5889657	789624	14	609,166,180,171,142,157,121,69,81,62,165,185,89,567,	0,4251,7246,14672,15522,18279,20065,21850,28149,30165,34900,39783,45425,68382,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	5897372	5990064	chr4:5897372-5990064	0	-	5959374	5990064	789624	8	8077,2925,122,49,183,57,165,1718,	0,59329,67651,70041,76286,78526,82801,90974,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	5897590	5989647	chr4:5897590-5989647	1	-	5959374	5988349	789624	8	598,2726,122,49,183,57,165,1301,	0,59310,67433,69823,76068,78308,82583,90756,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	5923274	5923328	chr4:5923274-5923328	3	-	5923274	5923274	5263520	1	54,	0,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr4	5957117	6200555	chr4:5957117-6200555	3	-	5959374	6018431	789624	34	2509,122,49,183,57,165,2478,128,130,537,139,402,2310,76,66,204,78,69,66,54,102,99,63,84,129,129,60,141,147,120,210,495,276,303,	0,7906,10296,16541,18781,23056,31229,35685,37229,50878,54712,61027,65586,69085,72598,78786,83521,85041,91739,92701,93460,96932,99579,103306,105194,107762,121821,123054,124491,127728,128302,148355,155604,243135,
#Partially deleted in new
chr4	6026202	6200555	chr4:6026202-6200555	1	-	6026227	6112850	789624	21	76,66,204,78,69,66,54,102,99,63,84,129,129,60,141,147,120,210,495,276,303,	0,3513,9701,14436,15956,22654,23616,24375,27847,30494,34221,36109,38677,52736,53969,55406,58643,59217,79270,86519,174050,
#Partially deleted in new
chr4	6026202	6200555	chr4:6026202-6200555	1	-	6026227	6112850	789624	19	76,66,204,78,69,66,54,102,99,63,84,129,129,141,147,120,210,276,303,	0,3513,9701,14436,15956,22654,23616,24375,27847,30494,34221,36109,38677,53969,55406,58643,59217,86519,174050,
#Partially deleted in new
chr4	6026202	6070195	chr4:6026202-6070195	1	-	6026227	6070062	789624	14	76,66,204,78,69,66,54,102,99,63,84,129,129,139,	0,3513,9701,14436,15956,22654,23616,24375,27847,30494,34221,36109,38677,43854,
#Partially deleted in new
chr4	6053756	6200591	chr4:6053756-6200591	3	-	6053974	6112850	789624	13	392,63,84,129,129,60,141,147,120,210,495,276,339,	0,2940,6667,8555,11123,25182,26415,27852,31089,31663,51716,58965,146496,
#Partially deleted in new
chr4	6053756	6200555	chr4:6053756-6200555	0	-	6054800	6112850	789624	14	392,56,63,84,129,129,60,141,147,120,210,495,276,303,	0,991,2940,6667,8555,11123,25182,26415,27852,31089,31663,51716,58965,146496,
#Partially deleted in new
chr4	6053758	6194617	chr4:6053758-6194617	1	-	6053974	6112850	789624	13	390,63,84,129,129,60,141,147,120,210,495,276,127,	0,2938,6665,8553,11121,25180,26413,27850,31087,31661,51714,58963,140732,
#Partially deleted in new
chr4	6053801	6194619	chr4:6053801-6194619	1	-	6053974	6112850	789624	12	347,63,84,129,129,60,141,147,120,210,276,129,	0,2895,6622,8510,11078,25137,26370,27807,31044,31618,58920,140689,
#Partially deleted in new
chr4	6062392	6150508	chr4:6062392-6150508	0	-	6062392	6062392	8553170	8	48,129,60,141,147,120,210,184,	0,2487,16546,17779,19216,22453,23027,87932,
#Partially deleted in new
chr4	6064976	6070162	chr4:6064976-6070162	3	-	6064976	6070162	789624	2	32,106,	0,5080,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	6200732	6239937	chr4:6200732-6239937	7	+	6200732	6200732	16724991	5	207,78,123,1077,2682,	0,26193,27284,32127,36523,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	6202327	6206649	chr4:6202327-6206649	3	+	6202327	6202327	8553170	2	266,3855,	0,467,
#Partially deleted in new
chr4	6222218	6234827	chr4:6222218-6234827	4	+	6222218	6222218	16724991	4	466,78,123,1968,	0,4707,5798,10641,
#Deleted in new
chr4	6227613	6229867	chr4:6227613-6229867	5	+	6227613	6227613	16724991	3	40,123,79,	0,403,2175,
#Partially deleted in new
chr4	6269848	6302883	chr4:6269848-6302883	1	+	6277455	6302468	789624	8	166,233,83,145,171,81,149,2227,	0,7606,17244,19138,21348,22068,25192,30808,
#Partially deleted in new
chr4	6269849	6303265	chr4:6269849-6303265	3	+	6277455	6302468	789624	8	165,237,83,145,171,81,149,2609,	0,7601,17243,19137,21347,22067,25191,30807,
#Partially deleted in new
chr4	6269849	6287277	chr4:6269849-6287277	0	+	6269849	6269849	8553170	3	165,237,185,	0,7601,17243,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	6288486	6303265	chr4:6288486-6303265	0	+	6288486	6288486	8553170	5	645,171,81,149,2609,	0,2710,3430,6554,12170,
#Partially deleted in new
chr4	6289074	6300917	chr4:6289074-6300917	0	+	6289074	6300917	789624	5	57,171,81,185,261,	0,2122,2842,5930,11582,
#Partially deleted in new
chr4	6294770	6300807	chr4:6294770-6300807	0	+	6294770	6294770	8553170	2	419,151,	0,5886,
#Partially deleted in new
chr4	6320577	6381870	chr4:6320577-6381870	1	-	6323301	6381846	789624	9	3016,92,170,165,178,113,166,98,94,	0,8684,12984,27268,51945,55241,57829,60419,61199,
#Partially deleted in new
chr4	6322943	6563600	chr4:6322943-6563600	1	-	6323301	6535319	789624	10	650,92,170,165,178,113,166,98,107,41,	0,6318,10618,24902,49579,52875,55463,58053,212327,240616,
#Partially deleted in new
chr4	6323045	6421118	chr4:6323045-6421118	1	-	6323301	6413921	789624	10	548,92,170,165,178,113,166,98,129,173,	0,6216,10516,24800,49477,52773,55361,57951,90857,97900,
#Partially deleted in new
chr4	6323055	6472446	chr4:6323055-6472446	3	-	6323301	6472229	789624	9	538,92,170,165,178,113,166,98,287,	0,6206,10506,24790,49467,52763,55351,57941,149104,
#Partially deleted in new
chr4	6323160	6555678	chr4:6323160-6555678	1	-	6323301	6535319	789624	10	433,92,170,165,178,113,166,98,107,145,	0,6101,10401,24685,49362,52658,55246,57836,212110,232373,
#Partially deleted in new
chr4	6333645	6384826	chr4:6333645-6384826	0	-	6333645	6333645	8553170	6	86,165,178,113,166,3830,	0,14200,38877,42173,44761,47351,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	6347925	6523547	chr4:6347925-6523547	0	-	6347925	6347925	8553170	5	85,178,113,98,105,	0,24597,27893,33071,175517,
#Partially deleted in new
chr4	6372591	6381867	chr4:6372591-6381867	0	-	6378567	6381846	789624	5	109,113,166,54,91,	0,3227,5815,8449,9185,
#Partially deleted in new
chr4	6380032	6471686	chr4:6380032-6471686	0	-	6380032	6380032	8553170	3	358,98,123,	0,964,91531,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr4	6575174	6623362	chr4:6575174-6623362	3	+	6575210	6621285	789624	19	174,147,106,173,116,178,199,191,157,134,275,192,253,111,193,138,113,118,2175,	0,1403,3218,11821,13870,17998,19359,21938,23023,25448,29880,33932,34623,35705,35911,39043,42205,44752,46013,
#Partially deleted in new
chr4	6575188	6621354	chr4:6575188-6621354	1	+	6575210	6621285	789624	19	160,147,106,173,116,112,112,191,157,134,275,192,253,111,193,138,113,118,167,	0,1389,3204,11807,13856,17984,19432,21924,23009,25434,29866,33918,34609,35691,35897,39029,42191,44738,45999,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr4	6575214	6622401	chr4:6575214-6622401	0	+	6575214	6617543	789624	17	134,147,106,173,116,178,199,191,157,134,275,192,253,111,193,138,5022,	0,1363,3178,11781,13830,17958,19319,21898,22983,25408,29840,33892,34583,35665,35871,39003,42165,
#Partially deleted in new
chr4	6605247	6610041	chr4:6605247-6610041	0	+	6605247	6605247	8553170	4	82,192,178,244,	0,3859,4149,4550,
#Partially deleted in new
chr4	6617447	6618916	chr4:6617447-6618916	0	+	6617447	6617447	8553170	2	45,122,	0,1347,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	6640090	6642729	chr4:6640090-6642729	3	+	6640862	6641246	789624	3	618,431,1000,	0,737,1639,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	6640090	6642745	chr4:6640090-6642745	1	+	6640862	6641246	789624	3	1064,32,1016,	0,1136,1639,
#Deleted in new
chr4	6640685	6641791	chr4:6640685-6641791	1	+	6640862	6641246	789624	3	70,431,62,	0,142,1044,
#Deleted in new
chr4	6640690	6642745	chr4:6640690-6642745	1	+	6640862	6641246	789624	2	568,1016,	0,1039,
#Deleted in new
chr4	6640713	6642695	chr4:6640713-6642695	0	+	6640713	6640713	8553170	1	1982,	0,
#Duplicated in new
chr4	6648695	6673896	chr4:6648695-6673896	1	-	6648695	6648695	8553170	5	295,168,119,97,213,	0,3311,10756,13244,24988,
#Deleted in new
chr4	6658689	6658981	chr4:6658689-6658981	7	+	6658689	6658689	16724991	1	292,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	6663395	6676755	chr4:6663395-6676755	0	+	6663395	6663395	8553170	3	106,188,1763,	0,241,11597,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	6670724	6673830	chr4:6670724-6673830	3	-	6670724	6670724	789624	2	275,147,	0,2959,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	6670727	6673823	chr4:6670727-6673823	0	-	6670727	6670727	8553170	2	266,140,	0,2956,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	6673450	6676047	chr4:6673450-6676047	0	+	6674212	6674572	789624	2	1256,1055,	0,1542,
#Deleted in new
chr4	6673968	6676013	chr4:6673968-6676013	3	+	6674212	6674572	789624	1	2045,	0,
#Deleted in new
chr4	6674087	6676047	chr4:6674087-6676047	0	+	6674212	6674572	789624	2	550,1055,	0,905,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	6687447	6690519	chr4:6687447-6690519	3	-	6687447	6687447	789624	3	1449,151,221,	0,1861,2851,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	6691994	6692970	chr4:6691994-6692970	3	-	6691994	6691994	8553170	1	976,	0,
#Deleted in new
chr4	6692054	6692462	chr4:6692054-6692462	0	-	6692054	6692054	8553170	1	408,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	6693068	6697169	chr4:6693068-6697169	3	+	6693932	6697042	0	2	1002,277,	0,3824,
#Partially deleted in new
chr4	6693877	6697170	chr4:6693877-6697170	0	+	6693877	6693877	8553170	2	35,278,	0,3015,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	6697860	6698809	chr4:6697860-6698809	3	-	6697860	6697860	8553170	1	949,	0,
#Deleted in new
chr4	6707700	6709880	chr4:6707700-6709880	3	-	6709245	6709629	789624	2	943,650,	0,1530,
#Deleted in new
chr4	6707700	6709827	chr4:6707700-6709827	0	-	6707700	6707700	8553170	1	2127,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	6716054	6717671	chr4:6716054-6717671	3	+	6716209	6716863	789624	1	1617,	0,
#Partially deleted in new
chr4	6781374	6824293	chr4:6781374-6824293	0	+	6781374	6781374	8553170	2	454,109,	0,42810,
#Partially deleted in new
chr4	6782641	6824684	chr4:6782641-6824684	0	+	6824453	6824680	789624	2	200,500,	0,41543,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	6782731	6884170	chr4:6782731-6884170	3	+	6824453	6880966	789624	9	110,500,138,67,82,3283,109,98,3384,	0,41453,59335,74432,75693,78169,88842,93928,98055,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	6782739	6884164	chr4:6782739-6884164	1	+	6824453	6880966	789624	10	102,84,500,138,67,82,3283,109,98,3378,	0,21783,41445,59327,74424,75685,78161,88834,93920,98047,
#Partially deleted in new
chr4	6855798	6860939	chr4:6855798-6860939	0	+	6855798	6855798	8553170	4	100,67,82,39,	0,1365,2626,5102,
#Partially deleted in new
chr4	6909241	6923771	chr4:6909241-6923771	0	+	6923389	6923771	789624	2	264,399,	0,14131,
#Partially deleted in new
chr4	6909443	7033118	chr4:6909443-7033118	3	+	6923389	7030392	0	14	62,739,121,119,83,118,107,81,95,72,129,110,259,2792,	0,13929,57860,84740,86881,89641,91701,95400,97188,100433,101209,105004,115560,120883,
#Partially deleted in new
chr4	6909844	7033111	chr4:6909844-7033111	1	+	6923389	7030392	0	14	107,739,121,119,83,118,107,81,95,72,129,110,259,2785,	0,13528,57459,84339,86480,89240,91300,94999,96787,100032,100808,104603,115159,120482,
#Partially deleted in new
chr4	6910247	6923559	chr4:6910247-6923559	0	+	6923389	6923559	789624	2	354,187,	0,13125,
#Partially deleted in new
chr4	6954219	7033114	chr4:6954219-7033114	1	+	6954300	7030392	789624	13	119,121,119,83,118,107,81,95,72,129,110,259,2788,	0,13084,39964,42105,44865,46925,50624,52412,55657,56433,60228,70784,76107,
#Partially deleted in new
chr4	6987161	7033114	chr4:6987161-7033114	1	+	6987346	7030392	0	12	188,119,83,118,107,81,95,72,129,110,259,2788,	0,7022,9163,11923,13983,17682,19470,22715,23491,27286,37842,43165,
#Partially deleted in new
chr4	6987507	7033117	chr4:6987507-7033117	1	+	6996382	7030392	789624	12	57,119,83,118,107,81,95,72,129,110,259,2791,	0,6676,8817,11577,13637,17336,19124,22369,23145,26940,37496,42819,
#Partially deleted in new
chr4	6994208	7001476	chr4:6994208-7001476	0	+	6994208	6994208	8553170	4	94,83,118,332,	0,2116,4876,6936,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	6995340	6998958	chr4:6995340-6998958	3	+	6995340	6995340	8553170	2	407,184,	0,3434,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	6997011	6997328	chr4:6997011-6997328	3	+	6997011	6997011	8553170	1	317,	0,
#Partially deleted in new
chr4	6999182	7010777	chr4:6999182-7010777	0	+	6999182	7010777	789624	7	20,107,81,95,102,72,125,	0,1962,5661,7449,8341,10694,11470,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	7030553	7046231	chr4:7030553-7046231	3	-	7030553	7030553	789624	4	3500,104,123,573,	0,4617,14426,15105,
#Deleted in new
chr4	7040848	7042939	chr4:7040848-7042939	3	-	7041270	7042938	789624	1	2091,	0,
#Partially deleted in new
chr4	7041898	7054431	chr4:7041898-7054431	0	+	7054067	7054431	789624	2	188,370,	0,12163,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	7043390	7057952	chr4:7043390-7057952	3	+	7043579	7055054	789624	2	459,3891,	0,10671,
#Partially deleted in new
chr4	7043534	7055314	chr4:7043534-7055314	1	+	7043579	7055054	789624	2	90,1253,	0,10527,
#Deleted in new
chr4	7052823	7056641	chr4:7052823-7056641	1	+	7054067	7055054	789624	1	3818,	0,
#Deleted in new
chr4	7053352	7054456	chr4:7053352-7054456	0	+	7054067	7054456	789624	2	149,395,	0,709,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	7058905	7068197	chr4:7058905-7068197	3	-	7060861	7068032	789624	4	2303,82,163,227,	0,3479,5155,9065,
#Partially deleted in new
chr4	7060528	7068064	chr4:7060528-7068064	0	-	7060528	7060528	8553170	3	1938,163,94,	0,3532,7442,
#Partially deleted in new
chr4	7060687	7064341	chr4:7060687-7064341	0	-	7060687	7060687	8553170	3	521,82,281,	0,1697,3373,
#Partially deleted in new
chr4	7061137	7067547	chr4:7061137-7067547	0	-	7061137	7061137	8553170	4	71,82,163,108,	0,1247,2923,6302,
#Partially deleted in new
chr4	7094570	7103329	chr4:7094570-7103329	3	-	7094570	7094570	8553170	3	173,57,62,	0,2752,8697,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	7098067	7103380	chr4:7098067-7103380	1	-	7098067	7098067	789624	2	1387,113,	0,5200,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	7101239	7103385	chr4:7101239-7103385	1	-	7101239	7101239	8553170	1	2146,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	7112087	7112399	chr4:7112087-7112399	3	-	7112087	7112087	8553170	1	312,	0,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr4	7192537	7742827	chr4:7192537-7742827	3	+	7192646	7740264	789624	27	589,68,100,165,74,65,119,90,180,147,103,77,92,108,121,134,129,172,187,134,124,113,126,100,103,104,2628,	0,203750,338992,445790,461596,468962,471815,474586,483512,490205,496948,504660,510742,511639,520195,521702,522645,525474,531159,532616,534242,535812,537049,540784,541734,544531,547662,
#Deleted in new
chr4	7310449	7310524	chr4:7310449-7310524	3	+	7310449	7310449	5263520	1	75,	0,
#Partially deleted in new
chr4	7381897	7661529	chr4:7381897-7661529	0	+	7381897	7381897	8553170	6	95,68,100,165,74,30,	0,14390,149632,256430,272236,279602,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr4	7396277	7742836	chr4:7396277-7742836	1	+	7396323	7740264	789624	27	78,100,165,74,65,119,90,180,147,103,77,92,108,121,134,129,172,187,134,124,113,126,100,94,6,107,2637,	0,135252,242050,257856,265222,268075,270846,279772,286465,293208,300920,307002,307899,316455,317962,318905,321734,327419,328876,330502,332072,333309,337044,337994,339122,340788,343922,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	7430293	7434973	chr4:7430293-7434973	3	-	7433313	7434879	789624	1	4680,	0,
#Deleted in new
chr4	7460027	7460118	chr4:7460027-7460118	3	+	7460027	7460027	5263520	1	91,	0,
#Partially deleted in new
chr4	7734279	7740720	chr4:7734279-7740720	0	+	7734279	7740264	789624	3	95,146,521,	0,2789,5920,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	7754089	7778928	chr4:7754089-7778928	3	+	7754089	7754089	789624	2	70,6725,	0,18114,
#Partially deleted in new
chr4	7758713	7872313	chr4:7758713-7872313	1	-	7763764	7872078	789624	16	5078,165,191,165,115,118,146,212,150,82,96,180,212,109,98,362,	0,10130,14106,16025,20048,27480,34967,41728,50900,57304,60362,79810,84425,96752,109908,113238,
#Partially deleted in new
chr4	7758714	7939926	chr4:7758714-7939926	3	-	7763764	7872078	789624	17	5077,165,191,165,115,118,146,212,150,82,96,180,212,109,98,129,271,	0,10129,14105,16024,20047,27479,34966,41727,50899,57303,60361,79809,84424,96751,109907,113237,180941,
#Partially deleted in new
chr4	7758714	7939926	chr4:7758714-7939926	1	-	7763764	7872078	789624	18	5077,165,191,165,115,252,118,146,212,150,82,96,180,212,109,98,129,271,	0,10129,14105,16024,20047,22661,27479,34966,41727,50899,57303,60361,79809,84424,96751,109907,113237,180941,
#Partially deleted in new
chr4	7763221	7779187	chr4:7763221-7779187	0	-	7763221	7763221	8553170	5	570,165,191,165,426,	0,5622,9598,11517,15540,
#Partially deleted in new
chr4	7763566	7799160	chr4:7763566-7799160	0	-	7763566	7763566	8553170	9	225,165,191,165,115,252,118,146,261,	0,5277,9253,11172,15195,17809,22627,30114,35333,
#Partially deleted in new
chr4	7763623	7872082	chr4:7763623-7872082	1	-	7763764	7872078	789624	17	168,165,191,165,115,252,118,146,212,150,82,96,180,212,109,98,131,	0,5220,9196,11115,15138,17752,22570,30057,36818,45990,52394,55452,74900,79515,91842,104998,108328,
#Partially deleted in new
chr4	7788606	7793812	chr4:7788606-7793812	0	-	7788606	7788606	8553170	2	414,132,	0,5074,
#Partially deleted in new
chr4	7809438	7816048	chr4:7809438-7816048	0	-	7809515	7816048	789624	2	325,31,	0,6579,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	7838587	7862311	chr4:7838587-7862311	0	-	7838587	7838587	8553170	4	116,212,109,327,	0,4551,16878,23397,
#Deleted in new
chr4	7842687	7843837	chr4:7842687-7843837	0	-	7842687	7842687	8553170	2	663,95,	0,1055,
#Deleted in new
chr4	7939000	7940296	chr4:7939000-7940296	3	+	7939000	7939000	8553170	1	1296,	0,
#Deleted in new
chr4	7939000	7940295	chr4:7939000-7940295	0	+	7939000	7939000	8553170	1	1295,	0,
#Partially deleted in new
chr4	7965309	8020825	chr4:7965309-8020825	0	-	7965309	7965309	8553170	7	1794,81,8,142,53,54,624,	0,17954,18237,42749,43740,54308,54892,
#Partially deleted in new
chr4	7965311	8158811	chr4:7965311-8158811	1	-	7966989	8158689	0	17	1792,81,8,139,53,121,33,147,78,59,88,94,127,116,184,144,132,	0,17952,18235,42747,43738,64344,67336,70837,79852,88876,95655,112316,115364,122857,131787,141182,193368,
#Partially deleted in new
chr4	7965328	7983432	chr4:7965328-7983432	0	-	7965328	7965328	8553170	2	1775,169,	0,17935,
#Partially deleted in new
chr4	7965328	8071986	chr4:7965328-8071986	1	-	7966989	8061000	0	15	1775,81,8,55,62,142,53,54,121,33,147,78,59,88,218,	0,17935,18218,19510,27537,42730,43721,54289,64327,67319,70820,79835,88859,95638,106440,
#Partially deleted in new
chr4	7966045	8158709	chr4:7966045-8158709	3	-	7966989	8158689	0	21	1058,81,8,55,62,142,53,54,102,99,121,147,78,59,88,94,127,116,184,144,30,	0,17218,17501,18793,26820,42013,43004,53572,54156,61713,63610,70103,79118,88142,94921,111582,114630,122123,131053,140448,192634,
#Partially deleted in new
chr4	7966301	8158754	chr4:7966301-8158754	1	-	7966989	8158689	0	20	802,81,8,55,62,139,53,54,102,121,147,78,59,88,94,127,116,184,144,75,	0,16962,17245,18537,26564,41757,42748,53316,53900,63354,69847,78862,87886,94665,111326,114374,121867,130797,140192,192378,
#Partially deleted in new
chr4	7966301	8158754	chr4:7966301-8158754	1	-	7966989	8158689	0	18	802,81,8,139,53,54,102,121,147,78,59,88,94,127,116,184,144,75,	0,16962,17245,41757,42748,53316,53900,63354,69847,78862,87886,94665,111326,114374,121867,130797,140192,192378,
#Partially deleted in new
chr4	7966358	8158783	chr4:7966358-8158783	1	-	7966989	8158689	0	16	745,81,8,142,53,121,147,78,59,88,94,127,116,184,144,104,	0,16905,17188,41700,42691,63297,69790,78805,87829,94608,111269,114317,121810,130740,140135,192321,
#Partially deleted in new
chr4	7966978	8158709	chr4:7966978-8158709	1	-	7966989	8158689	789624	21	125,86,55,62,142,53,60,40,62,99,121,147,78,59,88,94,127,116,184,144,30,	0,16285,17860,25887,41080,42071,52639,53222,53263,60780,62677,69170,78185,87209,93988,110649,113697,121190,130120,139515,191701,
#Partially deleted in new
chr4	7966989	8158689	chr4:7966989-8158689	1	-	7966989	8158689	0	18	114,81,8,55,62,139,53,121,147,78,59,88,94,127,116,184,144,10,	0,16274,16557,17849,25876,41069,42060,62666,69159,78174,87198,93977,110638,113686,121179,130109,139504,191690,
#Deleted in new
chr4	8005300	8005381	chr4:8005300-8005381	3	-	8005300	8005300	5263520	1	81,	0,
#Partially deleted in new
chr4	8007024	8158832	chr4:8007024-8158832	1	-	8008041	8158689	0	14	1176,53,121,33,147,78,59,88,94,127,116,184,144,153,	0,2025,22631,25623,29124,38139,47163,53942,70603,73651,81144,90074,99469,151655,
#Partially deleted in new
chr4	8007384	8010728	chr4:8007384-8010728	0	-	8007384	8007384	8553170	3	816,53,299,	0,1665,3045,
#Partially deleted in new
chr4	8008062	8071827	chr4:8008062-8071827	0	-	8008062	8061000	789624	12	135,53,54,102,99,121,33,147,78,59,88,59,	0,987,11555,12139,19696,21593,24585,28086,37101,46125,52904,63706,
#Partially deleted in new
chr4	8020212	8041436	chr4:8020212-8041436	0	-	8020212	8020212	8553170	5	91,99,121,147,87,	0,7546,9443,15936,21137,
#Deleted in new
chr4	8022664	8023126	chr4:8022664-8023126	3	+	8022664	8022664	8553170	1	462,	0,
#Deleted in new
chr4	8066527	8067724	chr4:8066527-8067724	3	+	8066527	8066527	8553170	2	194,665,	0,532,
#Partially deleted in new
chr4	8106493	8158832	chr4:8106493-8158832	0	-	8106493	8106493	8553170	2	144,153,	0,52186,
#Deleted in new
chr4	8174420	8174999	chr4:8174420-8174999	7	+	8174420	8174420	16724991	1	579,	0,
#Partially deleted in new
chr4	8182071	8212829	chr4:8182071-8212829	0	+	8182071	8182071	8553170	4	139,200,75,129,	0,23095,27676,30629,
#Partially deleted in new
chr4	8182074	8216174	chr4:8182074-8216174	0	+	8209803	8216174	789624	5	136,75,128,106,64,	0,27673,30626,32400,34036,
#Deleted in new
chr4	8199297	8205612	chr4:8199297-8205612	0	+	8199297	8199297	8553170	2	108,446,	0,5869,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr4	8199302	8240744	chr4:8199302-8240744	0	+	8199302	8199302	8553170	16	103,200,158,128,106,147,103,196,131,42,1665,181,1106,123,1393,47,	0,5864,10362,13398,15172,16808,18942,20032,23537,25872,27677,32673,33105,36130,36975,41395,
#Partially deleted in new
chr4	8199303	8240735	chr4:8199303-8240735	0	+	8205194	8218326	789624	15	102,200,128,106,147,77,196,131,42,1665,181,151,123,197,38,	0,5863,13397,15171,16807,18967,20031,23536,25871,27676,32672,34059,36129,38170,41394,
#Deleted in new
chr4	8199363	8206123	chr4:8199363-8206123	1	+	8205194	8205706	789624	3	42,200,587,	0,5803,6173,
#Partially deleted in new
chr4	8199366	8241103	chr4:8199366-8241103	3	+	8205194	8240955	789624	18	39,200,75,128,106,147,211,77,196,131,42,1665,181,151,123,151,197,406,	0,5800,10381,13334,15108,16744,17590,18904,19968,23473,25808,27613,32609,33996,36066,36911,38107,41331,
#Partially deleted in new
chr4	8199370	8212736	chr4:8199370-8212736	0	+	8205194	8212736	789624	5	35,271,200,75,36,	0,5412,5796,10377,13330,
#Partially deleted in new
chr4	8199370	8241091	chr4:8199370-8241091	0	+	8205194	8209723	789624	18	35,200,158,128,106,147,211,77,196,131,42,1665,181,151,123,151,197,394,	0,5796,10294,13330,15104,16740,17586,18900,19964,23469,25804,27609,32605,33992,36062,36907,38103,41327,
#Deleted in new
chr4	8201385	8205263	chr4:8201385-8205263	0	+	8201385	8201385	8553170	2	162,97,	0,3781,
#Partially deleted in new
chr4	8201650	8214567	chr4:8201650-8214567	0	+	8201650	8201650	8553170	5	64,200,75,128,93,	0,3516,8097,11050,12824,
#Partially deleted in new
chr4	8209650	8213226	chr4:8209650-8213226	0	+	8209650	8209650	8553170	2	172,526,	0,3050,
#Partially deleted in new
chr4	8209663	8219472	chr4:8209663-8219472	0	+	8209663	8209663	8553170	6	159,128,106,147,77,138,	0,3037,4811,6447,8607,9671,
#Partially deleted in new
chr4	8214562	8219368	chr4:8214562-8219368	0	+	8214562	8215230	789624	6	18,71,147,211,77,34,	0,609,1548,2394,3708,4772,
#Partially deleted in new
chr4	8216202	8222932	chr4:8216202-8222932	0	+	8216202	8222932	789624	5	55,211,77,115,93,	0,754,2068,3132,6637,
#Deleted in new
chr4	8224595	8227469	chr4:8224595-8227469	0	+	8224595	8224595	8553170	3	33,42,490,	0,579,2384,
#Deleted in new
chr4	8225014	8227273	chr4:8225014-8227273	0	+	8225014	8225014	8553170	2	202,313,	0,1946,
#Deleted in new
chr4	8225155	8227545	chr4:8225155-8227545	0	+	8225155	8225155	8553170	2	61,566,	0,1824,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	8228531	8237519	chr4:8228531-8237519	0	+	8228531	8232716	789624	7	113,181,359,151,123,151,46,	0,3444,4175,4831,6901,7746,8942,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	8229150	8241091	chr4:8229150-8241091	0	+	8229150	8229150	8553170	7	106,181,1106,123,151,197,394,	0,2825,3257,6282,7127,8323,11547,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	8229175	8236429	chr4:8229175-8236429	0	+	8229175	8229175	8553170	4	81,181,151,997,	0,2800,4187,6257,
#Partially deleted in new
chr4	8229217	8235590	chr4:8229217-8235590	0	+	8229217	8229217	8553170	4	39,181,222,158,	0,2758,4074,6215,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	8229223	8232894	chr4:8229223-8232894	0	+	8229223	8229223	8553170	3	33,181,324,	0,2752,3347,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	8231141	8241091	chr4:8231141-8241091	0	+	8231141	8231141	8553170	4	1015,151,2238,394,	0,2221,4291,9556,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	8240843	8241803	chr4:8240843-8241803	0	+	8240843	8241413	789624	2	75,439,	0,521,
#Partially deleted in new
chr4	8269764	8307111	chr4:8269764-8307111	3	+	8269968	8306136	0	9	589,100,223,195,33,115,49,96,1141,	0,12672,16796,21605,22556,24322,32698,34419,36206,
#Partially deleted in new
chr4	8269776	8296474	chr4:8269776-8296474	1	+	8269968	8295717	0	7	577,100,223,195,33,115,780,	0,12660,16784,21593,22544,24310,25918,
#Partially deleted in new
chr4	8320116	8327142	chr4:8320116-8327142	3	+	8320116	8320116	8553170	3	406,155,803,	0,4224,6223,
#Partially deleted in new
chr4	8320175	8323863	chr4:8320175-8323863	0	+	8320175	8320175	8553170	2	347,145,	0,3543,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	8320278	8323965	chr4:8320278-8323965	1	+	8320278	8320278	8553170	4	244,76,118,247,	0,1678,1847,3440,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	8355089	8358338	chr4:8355089-8358338	3	-	8355089	8355089	8553170	1	3249,	0,
#Partially deleted in new
chr4	8366281	8440711	chr4:8366281-8440711	3	-	8366960	8416521	789624	18	799,87,68,175,116,114,123,121,123,183,97,89,144,90,75,234,158,64,	0,4626,7279,8696,15210,22891,23330,26051,28338,30655,33274,39673,43930,48010,48572,49484,50096,74366,
#Partially deleted in new
chr4	8366711	8440723	chr4:8366711-8440723	1	-	8370947	8416521	789624	17	369,87,175,116,114,123,121,123,183,97,89,144,90,75,234,158,76,	0,4196,8266,14780,22461,22900,25621,27908,30225,32844,39243,43500,47580,48142,49054,49666,73936,
#Partially deleted in new
chr4	8366711	8373815	chr4:8366711-8373815	0	-	8366711	8366711	8553170	3	369,87,255,	0,4196,6849,
#Partially deleted in new
chr4	8366711	8374167	chr4:8366711-8374167	0	-	8366711	8366711	8553170	4	369,87,68,100,	0,4196,6849,7356,
#Partially deleted in new
chr4	8366960	8428486	chr4:8366960-8428486	1	-	8366960	8416521	789624	18	120,87,68,175,116,114,123,121,123,183,97,89,144,90,75,234,158,136,	0,3947,6600,8017,14531,22212,22651,25372,27659,29976,32595,38994,43251,47331,47893,48805,49417,61390,
#Partially deleted in new
chr4	8374467	8415855	chr4:8374467-8415855	0	-	8374467	8374467	8553170	13	685,116,114,123,121,123,183,97,89,144,90,75,90,	0,7024,14705,15144,17865,20152,22469,25088,31487,35744,39824,40386,41298,
#Partially deleted in new
chr4	8381553	8394891	chr4:8381553-8394891	0	-	8381553	8381553	8553170	6	54,114,123,121,123,41,	0,7619,8058,10779,13066,13297,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	8393014	8393124	chr4:8393014-8393124	7	+	8393014	8393014	16724991	1	110,	0,
#Partially deleted in new
chr4	8410281	8428461	chr4:8410281-8428461	0	-	8410281	8415858	789624	5	74,90,75,234,111,	0,4010,4572,5484,18069,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	8438868	8468559	chr4:8438868-8468559	1	+	8446550	8468378	789624	9	174,115,191,69,108,72,107,184,646,	0,7607,10829,13091,14013,15873,25116,26509,29045,
#Partially deleted in new
chr4	8440804	8449720	chr4:8440804-8449720	0	+	8440804	8440804	8553170	3	637,115,23,	0,5671,8893,
#Partially deleted in new
chr4	8440822	8476526	chr4:8440822-8476526	3	+	8440822	8476001	789624	11	619,115,220,69,108,72,107,184,433,117,755,	0,5653,8846,11137,12059,13919,23162,24555,27091,30261,34949,
#Partially deleted in new
chr4	8440961	8449877	chr4:8440961-8449877	0	+	8440961	8449877	789624	2	480,180,	0,8736,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	8453409	8454942	chr4:8453409-8454942	3	-	8453409	8453409	8553170	2	302,362,	0,1171,
#Partially deleted in new
chr4	8454415	8476554	chr4:8454415-8476554	0	+	8454415	8454415	8553170	7	155,72,107,184,433,117,783,	0,326,9569,10962,13498,16668,21356,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	8470925	8493531	chr4:8470925-8493531	0	+	8470925	8470925	8553170	2	275,266,	0,22340,
#Deleted in new
chr4	8473306	8475965	chr4:8473306-8475965	0	+	8473306	8473306	8553170	2	314,194,	0,2465,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	8473515	8493531	chr4:8473515-8493531	0	+	8473515	8473515	8553170	3	129,3762,266,	0,2256,19750,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	8482269	8509195	chr4:8482269-8509195	0	+	8482269	8482269	8553170	2	170,398,	0,26528,
#Partially deleted in new
chr4	8558724	8580524	chr4:8558724-8580524	0	+	8558724	8558724	8553170	3	257,117,130,	0,14008,21670,
#Partially deleted in new
chr4	8558831	8580711	chr4:8558831-8580711	0	+	8558831	8558831	8553170	3	150,69,317,	0,1733,21563,
#Partially deleted in new
chr4	8578324	8619749	chr4:8578324-8619749	0	+	8580982	8599456	789624	14	986,1734,114,33,375,213,197,162,159,107,136,140,100,488,	0,1592,4206,21128,22798,25651,27664,28412,28942,32838,33702,36034,40104,40937,
#Deleted in new
chr4	8580236	8587520	chr4:8580236-8587520	0	+	8580236	8580236	789624	3	468,114,467,	0,2294,6817,
#Deleted in new
chr4	8580565	8587548	chr4:8580565-8587548	3	+	8580982	8587363	789624	3	1085,114,495,	0,1965,6488,
#Deleted in new
chr4	8582790	8587750	chr4:8582790-8587750	0	+	8582790	8582790	8553170	2	260,697,	0,4263,
#Partially deleted in new
chr4	8592659	8619751	chr4:8592659-8619751	1	+	8592833	8619617	789624	11	262,33,375,213,197,162,159,136,140,100,490,	0,6793,8463,11316,13329,14077,14607,19367,21699,25769,26602,
#Partially deleted in new
chr4	8592659	8619759	chr4:8592659-8619759	1	+	8601412	8619617	789624	11	262,130,541,213,197,162,159,136,140,100,498,	0,6793,8297,11316,13329,14077,14607,19367,21699,25769,26602,
#Partially deleted in new
chr4	8592707	8601498	chr4:8592707-8601498	0	+	8592707	8592707	8553170	4	214,182,134,376,	0,4707,6745,8415,
#Partially deleted in new
chr4	8592725	8619751	chr4:8592725-8619751	0	+	8592833	8599574	789624	11	196,130,541,213,197,162,159,136,140,100,490,	0,6727,8231,11250,13263,14011,14541,19301,21633,25703,26536,
#Partially deleted in new
chr4	8592755	8619749	chr4:8592755-8619749	3	+	8592833	8619617	789624	10	166,375,213,197,162,159,136,140,100,488,	0,8367,11220,13233,13981,14511,19271,21603,25673,26506,
#Partially deleted in new
chr4	8592781	8601508	chr4:8592781-8601508	0	+	8592781	8592781	8553170	2	140,552,	0,8175,
#Partially deleted in new
chr4	8592796	8601450	chr4:8592796-8601450	0	+	8592796	8592796	8553170	3	125,130,328,	0,6656,8326,
#Partially deleted in new
chr4	8592833	8599961	chr4:8592833-8599961	0	+	8592833	8592833	8553170	2	88,509,	0,6619,
#Partially deleted in new
chr4	8601969	8619761	chr4:8601969-8619761	0	+	8601969	8601969	8553170	9	2219,197,162,159,107,136,140,100,500,	0,4019,4767,5297,9193,10057,12389,16459,17292,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	8618091	8619487	chr4:8618091-8619487	0	+	8618091	8618091	8553170	2	437,226,	0,1170,
#Deleted in new
chr4	8745396	8746033	chr4:8745396-8746033	3	-	8745396	8745396	8553170	2	360,104,	0,533,
#Partially deleted in new
chr4	8846075	8871622	chr4:8846075-8871622	1	-	8846145	8871614	789624	2	249,402,	0,25145,
#Deleted in new
chr4	8858714	8860827	chr4:8858714-8860827	3	-	8858714	8858714	8553170	2	383,179,	0,1934,
#Deleted in new
chr4	8867047	8871817	chr4:8867047-8871817	3	-	8867692	8871614	789624	2	1298,597,	0,4173,
#Deleted in new
chr4	8949629	8950559	chr4:8949629-8950559	7	+	8949629	8949629	16724991	1	930,	0,
#Partially deleted in new
chr4	8959627	8963981	chr4:8959627-8963981	7	+	8959627	8959627	16724991	3	274,119,312,	0,2086,4042,
#Deleted in new
chr4	8981435	8982360	chr4:8981435-8982360	7	+	8981435	8981435	16724991	1	925,	0,
#Deleted in new
chr4	8990454	8990806	chr4:8990454-8990806	7	+	8990454	8990454	16724991	1	352,	0,
#Deleted in new
chr4	9000840	9001058	chr4:9000840-9001058	7	+	9000840	9000840	16724991	1	218,	0,
#Deleted in new
chr4	9020856	9021161	chr4:9020856-9021161	7	-	9020856	9020856	16724991	1	305,	0,
#Partially deleted in new
chr4	9030285	9031066	chr4:9030285-9031066	7	+	9030285	9030285	16724991	1	781,	0,
#Deleted in new
chr4	9051841	9052051	chr4:9051841-9052051	7	-	9051841	9051841	16724991	1	210,	0,
#Partially deleted in new
chr4	9079022	9141608	chr4:9079022-9141608	7	+	9079022	9079022	16724991	3	158,149,626,	0,52442,61960,
#Partially deleted in new
chr4	9153295	9165451	chr4:9153295-9165451	7	+	9153295	9153295	16724991	8	96,63,81,102,134,265,150,96,	0,2228,4183,5859,7194,7410,8507,12060,
#Partially deleted in new
chr4	9166296	9170270	chr4:9166296-9170270	7	-	9166296	9166296	16724991	4	132,76,115,111,	0,1124,2204,3863,
#Partially deleted in new
chr4	9170408	9176730	chr4:9170408-9176730	3	+	9173172	9176167	789624	7	114,207,157,179,200,109,1526,	0,1123,1604,2708,3381,4039,4796,
#Deleted in new
chr4	9210656	9212249	chr4:9210656-9212249	3	+	9210656	9212249	789624	1	1593,	0,
#Deleted in new
chr4	9210656	9212608	chr4:9210656-9212608	1	+	9210656	9212608	789624	3	1590,25,62,	0,1593,1890,
#Deleted in new
chr4	9215404	9216997	chr4:9215404-9216997	3	+	9215404	9216997	789624	1	1593,	0,
#Deleted in new
chr4	9215404	9217356	chr4:9215404-9217356	1	+	9215404	9217356	789624	3	1590,25,62,	0,1593,1890,
#Deleted in new
chr4	9220151	9221744	chr4:9220151-9221744	3	+	9220151	9221744	789624	1	1593,	0,
#Deleted in new
chr4	9224895	9226488	chr4:9224895-9226488	3	+	9224895	9226488	789624	1	1593,	0,
#Deleted in new
chr4	9224895	9226847	chr4:9224895-9226847	1	+	9224895	9226847	789624	3	1590,25,62,	0,1593,1890,
#Deleted in new
chr4	9229640	9231233	chr4:9229640-9231233	7	+	9229640	9229640	16724991	1	1593,	0,
#Deleted in new
chr4	9234384	9235974	chr4:9234384-9235974	0	+	9234384	9235974	789624	1	1590,	0,
#Deleted in new
chr4	9234384	9236334	chr4:9234384-9236334	3	+	9234384	9236334	789624	2	1618,62,	0,1888,
#Deleted in new
chr4	9239129	9240722	chr4:9239129-9240722	7	+	9239129	9239129	16724991	1	1593,	0,
#Deleted in new
chr4	9243878	9245471	chr4:9243878-9245471	3	+	9243878	9245471	789624	1	1593,	0,
#Deleted in new
chr4	9243878	9245830	chr4:9243878-9245830	1	+	9243878	9245830	789624	3	1590,25,62,	0,1593,1890,
#Deleted in new
chr4	9248629	9250222	chr4:9248629-9250222	3	+	9248629	9250222	789624	1	1593,	0,
#Deleted in new
chr4	9248629	9250581	chr4:9248629-9250581	1	+	9248629	9250581	789624	3	1590,25,62,	0,1593,1890,
#Deleted in new
chr4	9253377	9254970	chr4:9253377-9254970	3	+	9253377	9254970	789624	1	1593,	0,
#Deleted in new
chr4	9253377	9255329	chr4:9253377-9255329	1	+	9253377	9255329	789624	3	1590,25,62,	0,1593,1890,
#Deleted in new
chr4	9258123	9259716	chr4:9258123-9259716	3	+	9258123	9259716	789624	1	1593,	0,
#Deleted in new
chr4	9258123	9260075	chr4:9258123-9260075	1	+	9258123	9260075	789624	3	1590,25,62,	0,1593,1890,
#Deleted in new
chr4	9262871	9264464	chr4:9262871-9264464	3	+	9262871	9264464	789624	1	1593,	0,
#Deleted in new
chr4	9262871	9264823	chr4:9262871-9264823	1	+	9262871	9264823	789624	3	1590,25,62,	0,1593,1890,
#Deleted in new
chr4	9267618	9269211	chr4:9267618-9269211	3	+	9267618	9269211	789624	1	1593,	0,
#Deleted in new
chr4	9267618	9269570	chr4:9267618-9269570	1	+	9267618	9269570	789624	3	1590,25,62,	0,1593,1890,
#Deleted in new
chr4	9272363	9272914	chr4:9272363-9272914	3	+	9272363	9272914	789624	1	551,	0,
#Deleted in new
chr4	9325164	9326757	chr4:9325164-9326757	3	+	9325164	9326757	789624	1	1593,	0,
#Deleted in new
chr4	9325164	9327116	chr4:9325164-9327116	1	+	9325164	9327116	789624	3	1590,25,62,	0,1593,1890,
#Deleted in new
chr4	9329910	9331503	chr4:9329910-9331503	3	+	9329910	9331503	789624	1	1593,	0,
#Deleted in new
chr4	9329910	9331862	chr4:9329910-9331862	1	+	9329910	9331862	789624	3	1590,25,62,	0,1593,1890,
#Deleted in new
chr4	9334657	9336250	chr4:9334657-9336250	3	+	9334657	9336250	789624	1	1593,	0,
#Deleted in new
chr4	9334657	9336609	chr4:9334657-9336609	1	+	9334657	9336609	789624	3	1590,25,62,	0,1593,1890,
#Deleted in new
chr4	9339402	9340995	chr4:9339402-9340995	3	+	9339402	9340995	789624	1	1593,	0,
#Deleted in new
chr4	9344147	9345740	chr4:9344147-9345740	3	+	9344147	9345740	789624	1	1593,	0,
#Deleted in new
chr4	9348892	9350485	chr4:9348892-9350485	3	+	9348892	9350485	789624	1	1593,	0,
#Deleted in new
chr4	9353637	9355230	chr4:9353637-9355230	3	+	9353637	9355230	789624	1	1593,	0,
#Deleted in new
chr4	9358382	9359975	chr4:9358382-9359975	7	+	9358382	9358382	16724991	1	1593,	0,
#Deleted in new
chr4	9363128	9364721	chr4:9363128-9364721	3	+	9363128	9364721	789624	1	1593,	0,
#Deleted in new
chr4	9367873	9369070	chr4:9367873-9369070	7	+	9367873	9367873	16724991	1	1197,	0,
#Partially deleted in new
chr4	9384016	9388983	chr4:9384016-9388983	7	-	9384016	9384016	16724991	5	583,83,96,127,12,	0,1641,2260,3132,4955,
#Deleted in new
chr4	9399203	9403565	chr4:9399203-9403565	7	+	9399203	9399203	16724991	2	58,164,	0,4198,
#Deleted in new
chr4	9411177	9411253	chr4:9411177-9411253	7	-	9411177	9411177	16724991	1	76,	0,
#Partially deleted in new
chr4	9422312	9429702	chr4:9422312-9429702	7	+	9422312	9422312	16724991	2	55,182,	0,7208,
#Partially deleted in new
chr4	9444533	9450514	chr4:9444533-9450514	3	+	9444533	9450514	789624	2	58,155,	0,5826,
#Deleted in new
chr4	9459254	9460244	chr4:9459254-9460244	7	+	9459254	9459254	16724991	1	990,	0,
#Deleted in new
chr4	9468973	9469983	chr4:9468973-9469983	7	+	9468973	9468973	16724991	1	1010,	0,
#Deleted in new
chr4	9483717	9484702	chr4:9483717-9484702	7	+	9483717	9483717	16724991	1	985,	0,
#Partially deleted in new
chr4	9493735	9498066	chr4:9493735-9498066	7	+	9493735	9493735	16724991	3	274,119,312,	0,2085,4019,
#Deleted in new
chr4	9512904	9513874	chr4:9512904-9513874	7	+	9512904	9512904	16724991	1	970,	0,
#Deleted in new
chr4	9521909	9522276	chr4:9521909-9522276	7	+	9521909	9521909	16724991	1	367,	0,
#Deleted in new
chr4	9532428	9532647	chr4:9532428-9532647	7	+	9532428	9532428	16724991	1	219,	0,
#Partially deleted in new
chr4	9553613	9553985	chr4:9553613-9553985	7	-	9553613	9553613	16724991	1	372,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	9556167	9556316	chr4:9556167-9556316	3	-	9556167	9556167	5263520	1	149,	0,
#Partially deleted in new
chr4	9563170	9563950	chr4:9563170-9563950	7	+	9563170	9563170	16724991	1	780,	0,
#Deleted in new
chr4	9583941	9584131	chr4:9583941-9584131	7	-	9583941	9583941	16724991	1	190,	0,
#Partially deleted in new
chr4	9677307	9677934	chr4:9677307-9677934	7	+	9677307	9677307	16724991	1	627,	0,
#Partially deleted in new
chr4	9692494	9702954	chr4:9692494-9702954	7	+	9692494	9692494	16724991	8	36,63,81,102,131,263,150,59,	0,604,2549,4196,5526,5726,6850,10401,
#Partially deleted in new
chr4	9703753	9710812	chr4:9703753-9710812	7	-	9703753	9703753	16724991	8	125,76,118,111,60,39,122,114,	0,1130,2220,3885,5150,5859,6083,6945,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	9711952	9712233	chr4:9711952-9712233	3	-	9711952	9711952	8553170	1	281,	0,
#Partially deleted in new
chr4	9733369	9742361	chr4:9733369-9742361	7	+	9733369	9733369	16724991	4	211,151,85,94,	0,2544,6237,8898,
#Deleted in new
chr4	9754897	9755778	chr4:9754897-9755778	7	+	9754897	9754897	16724991	1	881,	0,
#Partially deleted in new
chr4	9771152	9826600	chr4:9771152-9826600	0	-	9771152	9771152	8553170	2	217,181,	0,55267,
#Partially deleted in new
chr4	9779806	9887642	chr4:9779806-9887642	0	-	9779806	9779806	8553170	4	259,181,128,76,	0,46613,55074,107760,
#Deleted in new
chr4	9781679	9784009	chr4:9781679-9784009	3	+	9782029	9783463	789624	1	2330,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	9792750	9792861	chr4:9792750-9792861	7	-	9792750	9792750	16724991	1	111,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	9798659	9887642	chr4:9798659-9887642	0	-	9798659	9798659	8553170	4	582,181,128,76,	0,27760,36221,88907,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	9799077	9908345	chr4:9799077-9908345	0	-	9799077	9799077	8553170	4	164,181,128,111,	0,27342,35803,109157,
#Partially deleted in new
chr4	9826223	10021483	chr4:9826223-10021483	3	-	9826396	10021429	789624	12	377,128,76,102,111,188,133,146,125,161,99,204,	0,8657,61343,64386,82011,94161,115689,154368,159445,170557,192751,195056,
#Partially deleted in new
chr4	9826223	10054875	chr4:9826223-10054875	1	-	9826396	10025966	789624	14	377,128,76,102,111,188,133,146,125,161,99,103,135,43,	0,8657,61343,64386,82011,94161,115689,154368,159445,170557,192751,199680,213906,228609,
#Partially deleted in new
chr4	9826225	10040248	chr4:9826225-10040248	1	-	9826396	10025966	789624	13	375,128,76,102,111,188,133,146,125,161,99,103,119,	0,8655,61341,64384,82009,94159,115687,154366,159443,170555,192749,199678,213904,
#Partially deleted in new
chr4	9880205	10040210	chr4:9880205-10040210	0	-	9880205	9880205	8553170	12	334,76,102,111,188,133,146,125,161,99,103,81,	0,7361,10404,28029,40179,61707,100386,105463,116575,138769,145698,159924,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	9922813	9924146	chr4:9922813-9924146	3	+	9922813	9922813	8553170	2	137,371,	0,962,
#Partially deleted in new
chr4	9980591	10054936	chr4:9980591-10054936	0	-	9980591	10025966	789624	6	146,125,161,99,103,104,	0,5077,16189,38383,45312,74241,
#Partially deleted in new
chr4	9985667	10019294	chr4:9985667-10019294	0	-	9985667	9985667	8553170	2	126,320,	0,33307,
#Partially deleted in new
chr4	9995668	10019075	chr4:9995668-10019075	0	-	9995668	9995668	8553170	3	305,161,101,	0,1112,23306,
#Partially deleted in new
chr4	10006481	10009725	chr4:10006481-10009725	3	+	10006481	10006481	8553170	2	211,248,	0,2996,
#Partially deleted in new
chr4	10025723	10029300	chr4:10025723-10029300	0	-	10025723	10025723	8553170	2	283,283,	0,3294,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	10034224	10040388	chr4:10034224-10040388	0	-	10034224	10034224	8553170	2	1916,259,	0,5905,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	10068088	10073019	chr4:10068088-10073019	3	-	10068088	10068088	8553170	2	1736,1774,	0,3157,
#Partially deleted in new
chr4	10074338	10116860	chr4:10074338-10116860	1	-	10075377	10116666	789624	15	1146,145,174,111,88,157,88,234,81,78,181,148,91,122,210,	0,2965,3414,4552,7018,8683,10104,13368,13954,14325,23372,24653,29557,41774,42312,
#Partially deleted in new
chr4	10074339	10116949	chr4:10074339-10116949	1	-	10075377	10116666	789624	12	1145,145,174,111,88,155,90,234,81,78,122,299,	0,2964,3413,4551,7017,8682,10101,13367,13953,14324,41773,42311,
#Partially deleted in new
chr4	10074339	10116949	chr4:10074339-10116949	3	-	10075377	10116666	789624	15	1145,145,174,111,88,155,90,234,81,78,181,148,91,122,299,	0,2964,3413,4551,7017,8682,10101,13367,13953,14324,23371,24652,29556,41773,42311,
#Partially deleted in new
chr4	10075148	10116727	chr4:10075148-10116727	1	-	10075377	10116666	789624	12	336,145,174,111,88,157,88,234,81,78,122,77,	0,2155,2604,3742,6208,7873,9294,12558,13144,13515,40964,41502,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	10075148	10093019	chr4:10075148-10093019	0	-	10075148	10075148	8553170	12	336,1498,145,174,111,88,157,88,229,81,78,1497,	0,540,2155,2604,3742,6208,7873,9294,12558,13144,13515,16374,
#Partially deleted in new
chr4	10075342	10093155	chr4:10075342-10093155	0	-	10075342	10075342	8553170	11	142,145,174,111,88,157,88,234,81,78,113,	0,1961,2410,3548,6014,7679,9100,12364,12950,13321,17700,
#Deleted in new
chr4	10078610	10078692	chr4:10078610-10078692	3	-	10078610	10078610	5263520	1	82,	0,
#Partially deleted in new
chr4	10084423	10093034	chr4:10084423-10093034	0	-	10084423	10084423	8553170	5	107,234,81,78,55,	0,3283,3869,4240,8556,
#Partially deleted in new
chr4	10084423	10092939	chr4:10084423-10092939	0	-	10084423	10084423	8553170	5	107,234,81,78,72,	0,3283,3869,4240,8444,
#Partially deleted in new
chr4	10087705	10096618	chr4:10087705-10096618	0	-	10087705	10087705	8553170	4	235,81,78,293,	0,587,958,8620,
#Partially deleted in new
chr4	10087705	10096578	chr4:10087705-10096578	0	-	10087705	10087705	8553170	4	235,81,78,158,	0,587,958,8715,
#Partially deleted in new
chr4	10087775	10096174	chr4:10087775-10096174	0	-	10087775	10087775	8553170	4	165,81,78,230,	0,517,888,8169,
#Partially deleted in new
chr4	10087841	10094896	chr4:10087841-10094896	0	-	10087841	10087841	8553170	4	94,81,78,214,	0,451,822,6841,
#Partially deleted in new
chr4	10088286	10116339	chr4:10088286-10116339	0	-	10088286	10116262	789624	6	87,78,181,148,91,227,	0,377,9424,10705,15609,27826,
#Partially deleted in new
chr4	10097709	10106556	chr4:10097709-10106556	0	-	10097709	10097709	8553170	4	182,148,91,128,	0,1282,6186,8719,
#Partially deleted in new
chr4	10097711	10116504	chr4:10097711-10116504	0	-	10097711	10097711	8553170	5	180,148,91,122,174,	0,1280,6184,18401,18619,
#Partially deleted in new
chr4	10097843	10116462	chr4:10097843-10116462	0	-	10097843	10097843	8553170	6	48,148,91,178,122,132,	0,1148,6052,10374,18269,18487,
#Partially deleted in new
chr4	10098989	10106499	chr4:10098989-10106499	0	-	10098989	10098989	8553170	3	150,91,33,	0,4906,7477,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	10115755	10115884	chr4:10115755-10115884	7	-	10115755	10115755	16724991	1	129,	0,
#Deleted in new
chr4	10115893	10116868	chr4:10115893-10116868	0	-	10115893	10115893	8553170	2	341,218,	0,757,
#Deleted in new
chr4	10143366	10143655	chr4:10143366-10143655	7	-	10143366	10143366	16724991	1	289,	0,
#Deleted in new
chr4	10167158	10167765	chr4:10167158-10167765	7	-	10167158	10167158	16724991	1	607,	0,
#Deleted in new
chr4	10199822	10200672	chr4:10199822-10200672	7	-	10199822	10199822	16724991	1	850,	0,
#Deleted in new
chr4	10238212	10238235	chr4:10238212-10238235	7	-	10238212	10238212	16724991	1	23,	0,
#Deleted in new
chr4	10254925	10256621	chr4:10254925-10256621	7	-	10254925	10254925	16724991	1	1696,	0,
#Deleted in new
chr4	10259444	10260138	chr4:10259444-10260138	7	-	10259444	10259444	16724991	1	694,	0,
#Deleted in new
chr4	10267894	10268231	chr4:10267894-10268231	7	-	10267894	10267894	16724991	1	337,	0,
#Deleted in new
chr4	10284960	10285708	chr4:10284960-10285708	7	-	10284960	10284960	16724991	1	748,	0,
#Deleted in new
chr4	10292194	10292708	chr4:10292194-10292708	7	-	10292194	10292194	16724991	1	514,	0,
#Deleted in new
chr4	10294462	10295579	chr4:10294462-10295579	7	-	10294462	10294462	16724991	1	1117,	0,
#Partially deleted in new
chr4	10410995	10411644	chr4:10410995-10411644	7	+	10410995	10410995	16724991	2	85,244,	0,405,
#Partially deleted in new
chr4	10439873	10457360	chr4:10439873-10457360	3	-	10443103	10446328	789624	3	6666,184,44,	0,14931,17443,
#Partially deleted in new
chr4	10446101	10457405	chr4:10446101-10457405	0	-	10446101	10446328	789624	2	438,89,	0,11215,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	10450886	10457176	chr4:10450886-10457176	0	-	10450886	10450886	8553170	2	4102,43,	0,6247,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	10450886	10457410	chr4:10450886-10457410	0	-	10450886	10450886	8553170	2	4102,94,	0,6430,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	10450886	10457408	chr4:10450886-10457408	0	-	10450886	10450886	8553170	3	2136,395,92,	0,3707,6430,
#Partially deleted in new
chr4	10478523	10478923	chr4:10478523-10478923	7	-	10478523	10478523	16724991	1	400,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr4	10486394	10684865	chr4:10486394-10684865	3	-	10490466	10667869	789624	19	4219,156,78,134,41,82,19,28,111,20,26,46,107,142,38,29,72,53,198,	0,14861,21564,27069,34396,39446,41681,45861,54099,55627,55860,72012,78276,79614,85346,98532,111583,181464,198273,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	10486873	10517465	chr4:10486873-10517465	1	-	10490466	10513583	789624	5	3740,156,78,134,72,	0,14382,21085,26590,30520,
#Partially deleted in new
chr4	10490214	10598681	chr4:10490214-10598681	1	-	10490466	10598681	789624	18	399,156,78,134,41,82,19,28,111,20,26,46,107,142,38,29,77,6,	0,11041,17744,23249,30576,35626,37861,42041,50279,51807,52040,68192,74456,75794,81526,94712,107763,108461,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	10531412	10656561	chr4:10531412-10656561	1	-	10531752	10571764	789624	13	346,28,111,20,26,46,107,142,38,29,72,125,53,	0,843,9081,10609,10842,26994,33258,34596,40328,53514,66565,104364,125096,
#Partially deleted in new
chr4	10685002	10697661	chr4:10685002-10697661	3	+	10685002	10685002	8553170	3	59,42,539,	0,7062,12120,
#Partially deleted in new
chr4	10737571	10749586	chr4:10737571-10749586	3	+	10737571	10737571	8553170	3	206,444,415,	0,534,11600,
#Deleted in new
chr4	11368826	11368921	chr4:11368826-11368921	3	+	11368826	11368826	5263520	1	95,	0,
#Deleted in new
chr4	11371974	11372892	chr4:11371974-11372892	7	+	11371974	11371974	16724991	1	918,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	11393149	11429765	chr4:11393149-11429765	3	-	11399081	11400005	0	2	6964,1067,	0,35549,
#Partially deleted in new
chr4	11399757	11429564	chr4:11399757-11429564	0	-	11399757	11400005	789624	2	356,140,	0,29667,
#Partially deleted in new
chr4	11399757	11428597	chr4:11399757-11428597	0	-	11399757	11400005	789624	2	356,135,	0,28705,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	11414050	11414160	chr4:11414050-11414160	7	-	11414050	11414050	16724991	1	110,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	11469249	11478196	chr4:11469249-11478196	3	+	11469249	11469249	8553170	2	582,3437,	0,5510,
#Partially deleted in new
chr4	11625713	11813958	chr4:11625713-11813958	1	+	11625713	11625713	8553170	4	98,43,167,247,	0,137745,144595,187998,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	11722436	11771868	chr4:11722436-11771868	0	+	11722436	11722436	8553170	4	179,83,167,164,	0,46291,47872,49268,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	11722450	11802428	chr4:11722450-11802428	3	+	11722450	11722450	8553170	5	165,83,167,72,201,	0,46277,47858,51142,79777,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	11722494	11789866	chr4:11722494-11789866	1	+	11722494	11722494	8553170	4	121,167,350,109,	0,47814,55691,67263,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	11740947	11769468	chr4:11740947-11769468	3	-	11740947	11740947	8553170	4	288,136,67,166,	0,2163,6038,28355,
#Partially deleted in new
chr4	11770305	11771884	chr4:11770305-11771884	1	+	11770305	11770305	8553170	3	170,77,180,	0,306,1399,
#Partially deleted in new
chr4	11770367	11773871	chr4:11770367-11773871	0	+	11770367	11770367	8553170	2	108,279,	0,3225,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	11914666	11919688	chr4:11914666-11919688	3	+	11914666	11914666	8553170	2	88,335,	0,4687,
#Partially deleted in new
chr4	12223481	12251286	chr4:12223481-12251286	3	+	12223481	12223481	789624	4	147,127,36,300,	0,19570,23453,27505,
#Deleted in new
chr4	12312587	12312690	chr4:12312587-12312690	3	+	12312587	12312587	8553170	1	103,	0,
#Deleted in new
chr4	12639085	12641009	chr4:12639085-12641009	7	+	12639085	12639085	16724991	2	1231,346,	0,1578,
#Deleted in new
chr4	12640297	12640637	chr4:12640297-12640637	7	-	12640297	12640297	16724991	1	340,	0,
#Partially deleted in new
chr4	12859100	12864961	chr4:12859100-12864961	3	-	12859100	12859100	8553170	2	2602,92,	0,5769,
#Deleted in new
chr4	13051341	13051411	chr4:13051341-13051411	3	+	13051341	13051341	8553170	1	70,	0,
#Partially deleted in new
chr4	13333413	13338302	chr4:13333413-13338302	7	+	13333413	13333413	16724991	4	123,325,414,415,	0,3068,3623,4474,
#Deleted in new
chr4	13336481	13338657	chr4:13336481-13338657	5	+	13336481	13336481	16724991	1	2176,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	13361353	13474345	chr4:13361353-13474345	0	-	13369875	13474345	789624	6	280,95,78,104,130,28,	0,8517,15191,20137,99345,112964,
#Partially deleted in new
chr4	13367723	13484365	chr4:13367723-13484365	1	-	13369875	13484150	0	8	927,95,78,104,130,89,97,290,	0,2147,8821,13767,92975,106594,111706,116352,
#Partially deleted in new
chr4	13367723	13484365	chr4:13367723-13484365	3	-	13368557	13484150	0	7	927,78,104,130,89,97,290,	0,8821,13767,92975,106594,111706,116352,
#Partially deleted in new
chr4	13367723	13484331	chr4:13367723-13484331	0	-	13381567	13484150	789624	6	927,78,104,89,97,256,	0,8821,13767,106594,111706,116352,
#Partially deleted in new
chr4	13367724	13484365	chr4:13367724-13484365	1	-	13371825	13484150	0	8	926,73,78,104,130,89,97,290,	0,4070,8820,13766,92974,106593,111705,116351,
#Partially deleted in new
chr4	13367724	13484365	chr4:13367724-13484365	1	-	13381567	13484150	789624	7	926,95,78,104,89,97,290,	0,2146,8820,13766,106593,111705,116351,
#Partially deleted in new
chr4	13368500	13381594	chr4:13368500-13381594	0	-	13371825	13381594	789624	4	150,73,78,104,	0,3294,8044,12990,
#Partially deleted in new
chr4	13459862	13474322	chr4:13459862-13474322	0	-	13459900	13474322	789624	3	58,130,5,	0,836,14455,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	13526318	13531417	chr4:13526318-13531417	3	-	13526318	13526318	789624	4	1575,96,181,270,	0,1832,2603,4829,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	13526361	13534335	chr4:13526361-13534335	0	-	13526361	13526361	8553170	4	1532,152,175,45,	0,1789,2566,7929,
#Partially deleted in new
chr4	13527291	13531372	chr4:13527291-13531372	0	-	13527291	13527291	8553170	3	605,96,225,	0,859,3856,
#Deleted in new
chr4	13540829	13545050	chr4:13540829-13545050	3	-	13541992	13544414	789624	2	1699,1102,	0,3119,
#Deleted in new
chr4	13546074	13546964	chr4:13546074-13546964	0	-	13546074	13546074	8553170	2	242,124,	0,766,
#Deleted in new
chr4	13546075	13547801	chr4:13546075-13547801	3	-	13546075	13546075	789624	2	1043,220,	0,1506,
#Partially deleted in new
chr4	13568737	13627723	chr4:13568737-13627723	3	-	13570010	13627587	789624	26	1391,154,85,50,46,35,76,74,85,80,73,71,61,44,85,65,6139,73,139,112,167,150,615,191,125,379,	0,8100,8665,8844,11190,12282,12394,13499,13914,17658,18961,19984,21648,23185,27122,28366,30208,38379,39792,40557,42196,44774,45458,46574,51205,58607,
#Partially deleted in new
chr4	13569505	13581048	chr4:13569505-13581048	0	-	13570010	13581048	789624	7	623,141,154,85,50,46,29,	0,3196,7332,7897,8076,10422,11514,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	13569785	13578201	chr4:13569785-13578201	0	-	13569785	13569785	8553170	4	343,154,85,620,	0,7052,7617,7796,
#Partially deleted in new
chr4	13577580	13580066	chr4:13577580-13580066	0	-	13577580	13577580	8553170	2	51,139,	0,2347,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	13582229	13593520	chr4:13582229-13593520	0	-	13582229	13582229	8553170	7	81,85,80,73,71,61,1598,	0,422,4166,5469,6492,8156,9693,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	13613505	13627701	chr4:13613505-13627701	0	-	13626273	13627587	789624	6	156,615,191,125,2923,357,	0,690,1806,6437,9884,13839,
#Deleted in new
chr4	13627864	13627957	chr4:13627864-13627957	3	+	13627864	13627864	5263520	1	93,	0,
#Partially deleted in new
chr4	13631819	13632599	chr4:13631819-13632599	7	-	13631819	13631819	16724991	2	363,109,	0,671,
#Deleted in new
chr4	13647696	13648400	chr4:13647696-13648400	7	-	13647696	13647696	16724991	2	83,322,	0,382,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	13655178	13931228	chr4:13655178-13931228	3	+	13655178	13655178	789624	4	173,108,68,1879,	0,2568,174601,274171,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	13777376	13782157	chr4:13777376-13782157	3	-	13777376	13777376	8553170	1	4781,	0,
#Deleted in new
chr4	13977165	13978028	chr4:13977165-13978028	7	+	13977165	13977165	16724991	1	863,	0,
#Partially deleted in new
chr4	14111967	14140052	chr4:14111967-14140052	7	+	14111967	14111967	16724991	3	210,182,1592,	0,15109,26493,
#Partially deleted in new
chr4	14111976	14127256	chr4:14111976-14127256	4	+	14111976	14111976	16724991	4	201,217,141,180,	0,14226,14732,15100,
#Partially deleted in new
chr4	14111989	14138737	chr4:14111989-14138737	4	+	14111989	14111989	16724991	4	188,217,141,277,	0,14213,14719,26471,
#Partially deleted in new
chr4	14112019	14139486	chr4:14112019-14139486	4	+	14112019	14112019	16724991	2	158,1026,	0,26441,
#Deleted in new
chr4	14126338	14126664	chr4:14126338-14126664	5	+	14126338	14126338	16724991	1	326,	0,
#Partially deleted in new
chr4	14164454	14242813	chr4:14164454-14242813	0	+	14164454	14164454	8553170	2	149,168,	0,78191,
#Partially deleted in new
chr4	14235248	14242812	chr4:14235248-14242812	3	+	14235248	14235248	8553170	3	149,183,167,	0,266,7397,
#Partially deleted in new
chr4	14390438	14393992	chr4:14390438-14393992	3	+	14390438	14390438	8553170	2	159,432,	0,3122,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	14470464	14888169	chr4:14470464-14888169	3	-	14470464	14470464	789624	7	4099,112,100,137,39,74,111,	0,6882,101682,143815,230278,389078,417594,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	14474084	14888167	chr4:14474084-14888167	0	-	14474084	14474084	8553170	5	479,60,100,74,109,	0,3262,98062,385458,413974,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	14474086	14888168	chr4:14474086-14888168	0	-	14474086	14474086	8553170	7	477,112,100,39,75,74,110,	0,3260,98060,226656,242008,385456,413972,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	14505864	14506480	chr4:14505864-14506480	7	-	14505864	14505864	16724991	1	616,	0,
#Deleted in new
chr4	14690709	14690832	chr4:14690709-14690832	3	+	14690709	14690709	8553170	1	123,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	14909960	15002045	chr4:14909960-15002045	3	-	14909960	14909960	789624	8	808,156,101,191,97,69,100,108,	0,75260,80493,82751,85293,91200,91665,91977,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	14976899	14994505	chr4:14976899-14994505	1	-	14976899	14976899	8553170	5	109,173,156,191,1177,	0,484,8321,15812,16429,
#Partially deleted in new
chr4	15002673	15070153	chr4:15002673-15070153	1	+	15002673	15066380	789624	11	1662,291,91,51,24,171,90,119,115,182,4001,	0,4631,14514,30487,37790,49740,51454,55747,56513,59405,63479,
#Partially deleted in new
chr4	15002673	15070153	chr4:15002673-15070153	3	+	15002673	15066380	789624	12	1662,282,90,91,51,24,171,90,119,115,182,4001,	0,4631,5664,14514,30487,37790,49740,51454,55747,56513,59405,63479,
#Partially deleted in new
chr4	15003897	15066626	chr4:15003897-15066626	1	+	15003984	15066380	789624	10	438,282,91,51,171,90,119,115,182,474,	0,3407,13290,29263,48516,50230,54523,55289,58181,62255,
#Partially deleted in new
chr4	15003897	15066626	chr4:15003897-15066626	1	+	15003984	15066380	789624	11	438,282,90,91,51,171,90,119,115,182,474,	0,3407,4440,13290,29263,48516,50230,54523,55289,58181,62255,
#Partially deleted in new
chr4	15003935	15070149	chr4:15003935-15070149	1	+	15003984	15066380	789624	12	400,282,90,91,51,24,171,90,119,115,182,3997,	0,3369,4402,13252,29225,36528,48478,50192,54485,55251,58143,62217,
#Partially deleted in new
chr4	15003935	15070151	chr4:15003935-15070151	1	+	15003984	15066380	789624	11	400,282,91,51,24,171,90,119,115,182,3999,	0,3369,13252,29225,36528,48478,50192,54485,55251,58143,62217,
#Partially deleted in new
chr4	15003935	15070151	chr4:15003935-15070151	1	+	15003984	15066380	789624	10	400,291,91,51,171,90,119,115,182,3999,	0,3369,13252,29225,48478,50192,54485,55251,58143,62217,
#Partially deleted in new
chr4	15004941	15427914	chr4:15004941-15427914	3	-	15004941	15004941	789624	6	216,100,80,80,68,86,	0,1529,5551,12860,258455,422887,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	15006446	15227960	chr4:15006446-15227960	1	-	15006446	15006446	8553170	5	124,80,80,140,113,	0,4046,11355,59811,221401,
#Partially deleted in new
chr4	15007366	15017434	chr4:15007366-15017434	0	+	15007366	15007366	8553170	2	220,247,	0,9821,
#Partially deleted in new
chr4	15054132	15063871	chr4:15054132-15063871	0	+	15054132	15063740	789624	5	85,119,115,182,134,	0,4288,5054,7946,9605,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	15093766	15094094	chr4:15093766-15094094	3	-	15093766	15093766	8553170	1	328,	0,
#Partially deleted in new
chr4	15339817	15442362	chr4:15339817-15442362	2	+	15340194	15442362	789624	4	61,81,246,195,	0,309,95918,102350,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	15339935	15446165	chr4:15339935-15446165	1	+	15340194	15442799	789624	3	272,246,3998,	0,95800,102232,
#Partially deleted in new
chr4	15339987	15381867	chr4:15339987-15381867	0	+	15339987	15339987	8553170	2	220,105,	0,41775,
#Partially deleted in new
chr4	15340006	15374196	chr4:15340006-15374196	0	+	15340006	15340006	8553170	2	201,361,	0,33829,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	15358140	15420032	chr4:15358140-15420032	3	-	15358140	15358140	8553170	4	542,115,110,104,	0,3022,4273,61788,
#Partially deleted in new
chr4	15374548	15442266	chr4:15374548-15442266	0	+	15435743	15442266	789624	3	221,246,99,	0,61187,67619,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	15374550	15446166	chr4:15374550-15446166	1	+	15435743	15442799	789624	3	219,246,3999,	0,61185,67617,
#Partially deleted in new
chr4	15427788	15443136	chr4:15427788-15443136	1	+	15435743	15442799	789624	3	318,246,969,	0,7947,14379,
#Partially deleted in new
chr4	15469864	15601557	chr4:15469864-15601557	3	+	15475932	15601425	789624	37	229,64,84,124,89,102,102,177,163,137,132,210,107,141,157,239,178,157,148,139,204,93,92,168,106,110,97,99,177,204,90,114,135,123,59,178,321,	0,6043,8858,10839,32564,32957,40274,41382,44842,46003,46760,57582,58755,63328,67055,68034,70972,80959,83293,85207,87439,89300,90666,93490,97512,97812,99428,100533,104285,110103,116292,117951,119680,126220,127542,129664,131372,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	15469864	15482262	chr4:15469864-15482262	1	+	15475932	15481212	789624	6	229,64,84,106,124,1066,	0,6043,8858,9358,10839,11332,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	15469890	15482317	chr4:15469890-15482317	0	+	15475932	15479317	789624	6	167,57,84,110,124,1121,	0,6024,8832,9328,10813,11306,
#Partially deleted in new
chr4	15469890	15537076	chr4:15469890-15537076	0	+	15475932	15537076	789624	15	167,57,84,124,89,102,102,177,163,137,132,210,107,141,157,	0,6024,8832,10813,32538,32931,40248,41356,44816,45977,46734,57556,58729,63302,67029,
#Partially deleted in new
chr4	15469895	15543961	chr4:15469895-15543961	0	+	15469895	15469895	8553170	18	162,57,84,124,89,102,102,177,163,137,132,210,107,141,157,239,178,383,	0,6019,8827,10808,32533,32926,40243,41351,44811,45972,46729,57551,58724,63297,67024,68003,70941,73683,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	15469902	15481290	chr4:15469902-15481290	1	+	15475932	15481285	789624	6	155,34,57,84,124,94,	0,3319,6012,8820,10801,11294,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	15469911	15482259	chr4:15469911-15482259	1	+	15475932	15481285	789624	5	146,57,84,124,1063,	0,6003,8811,10792,11285,
#Partially deleted in new
chr4	15469920	15511675	chr4:15469920-15511675	0	+	15469920	15469920	8553170	8	137,57,84,124,89,102,102,429,	0,5994,8802,10783,32508,32901,40218,41326,
#Partially deleted in new
chr4	15469929	15601557	chr4:15469929-15601557	1	+	15475932	15601425	789624	38	128,34,57,84,124,89,102,102,177,163,137,132,210,107,141,157,239,178,157,148,139,204,93,92,168,106,110,97,99,177,204,90,114,135,123,59,178,321,	0,3292,5985,8793,10774,32499,32892,40209,41317,44777,45938,46695,57517,58690,63263,66990,67969,70907,80894,83228,85142,87374,89235,90601,93425,97447,97747,99363,100468,104220,110038,116227,117886,119615,126155,127477,129599,131307,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	15470012	15481351	chr4:15470012-15481351	1	+	15475932	15481212	789624	7	45,34,57,84,106,124,155,	0,3209,5902,8710,9210,10691,11184,
#Partially deleted in new
chr4	15479222	15601546	chr4:15479222-15601546	0	+	15479222	15502892	789624	34	106,124,89,102,102,177,163,137,132,210,107,141,157,239,178,157,148,139,204,93,92,168,106,110,97,99,204,90,114,135,123,59,178,310,	0,1481,23206,23599,30916,32024,35484,36645,37402,48224,49397,53970,57697,58676,61614,71601,73935,75849,78081,79942,81308,84132,88154,88454,90070,91175,100745,106934,108593,110322,116862,118184,120306,122014,
#Deleted in new
chr4	15492728	15492972	chr4:15492728-15492972	7	-	15492728	15492728	16724991	1	244,	0,
#Partially deleted in new
chr4	15511244	15601552	chr4:15511244-15601552	0	+	15511244	15601425	789624	32	179,163,137,132,210,107,141,157,239,178,157,148,139,204,93,92,15,168,106,110,97,99,177,21,204,90,114,135,123,59,178,316,	0,3462,4623,5380,16202,17375,21948,25675,26654,29592,39579,41913,43827,46059,47920,49286,50343,52110,56132,56432,58048,59153,62905,65359,68723,74912,76571,78300,84840,86162,88284,89992,
#Partially deleted in new
chr4	15527618	15533453	chr4:15527618-15533453	0	+	15527618	15527618	8553170	3	38,107,261,	0,1001,5574,
#Partially deleted in new
chr4	15536984	15601552	chr4:15536984-15601552	0	+	15536984	15597411	789624	23	92,239,178,157,148,139,204,93,92,168,106,110,97,99,177,204,90,114,135,64,59,178,316,	0,914,3852,13839,16173,18087,20319,22180,23546,26370,30392,30692,32308,33413,37165,42983,49172,50831,52560,59159,60422,62544,64252,
#Partially deleted in new
chr4	15550737	15557373	chr4:15550737-15557373	0	+	15550737	15550737	8553170	4	243,148,139,70,	0,2420,4334,6566,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	15563697	15564253	chr4:15563697-15564253	3	-	15563697	15563697	8553170	1	556,	0,
#Partially deleted in new
chr4	15589626	15601371	chr4:15589626-15601371	0	+	15589626	15601371	789624	4	53,59,178,135,	0,7780,9902,11610,
#Deleted in new
chr4	15595871	15597465	chr4:15595871-15597465	0	+	15595871	15595871	8553170	2	336,59,	0,1535,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	15604538	15655412	chr4:15604538-15655412	3	-	15605722	15655287	0	11	1261,149,726,83,149,126,183,187,96,216,209,	0,7727,20713,22334,23346,26127,31955,33969,36249,39954,50665,
#Partially deleted in new
chr4	15605005	15655382	chr4:15605005-15655382	1	-	15605722	15655287	0	11	794,149,726,83,149,126,183,187,96,165,179,	0,7260,20246,21867,22879,25660,31488,33502,35782,39487,50198,
#Partially deleted in new
chr4	15605005	15644649	chr4:15605005-15644649	0	-	15605722	15644649	789624	9	794,149,726,83,149,126,183,187,157,	0,7260,20246,21867,22879,25660,31488,33502,39487,
#Partially deleted in new
chr4	15612012	15655341	chr4:15612012-15655341	0	-	15612012	15612012	8553170	10	402,726,83,149,126,183,187,96,216,138,	0,13239,14860,15872,18653,24481,26495,28775,32480,43191,
#Partially deleted in new
chr4	15636372	15655295	chr4:15636372-15655295	0	-	15636372	15636372	8553170	4	304,187,96,92,	0,2135,4415,18831,
#Partially deleted in new
chr4	15636589	15644678	chr4:15636589-15644678	0	-	15636589	15644678	789624	4	81,187,96,186,	0,1918,4198,7903,
#Partially deleted in new
chr4	15638538	15659867	chr4:15638538-15659867	0	-	15638538	15644627	789624	4	156,96,216,127,	0,2249,5954,21202,
#Partially deleted in new
chr4	15638548	15659864	chr4:15638548-15659864	0	-	15638548	15644627	789624	4	146,96,216,138,	0,2239,5944,21178,
#Partially deleted in new
chr4	15638689	15681567	chr4:15638689-15681567	0	-	15638689	15644627	789624	4	5,96,216,215,	0,2098,5803,42663,
#Partially deleted in new
chr4	15640840	15681554	chr4:15640840-15681554	0	-	15640840	15656255	789624	5	43,216,114,196,172,	0,3652,15388,18886,40542,
#Partially deleted in new
chr4	15640848	15681619	chr4:15640848-15681619	0	-	15640848	15644627	789624	3	35,216,340,	0,3644,40431,
#Partially deleted in new
chr4	15659730	15681679	chr4:15659730-15681679	0	-	15659730	15659730	8553170	2	192,400,	0,21549,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	15681717	15690447	chr4:15681717-15690447	0	+	15681717	15681717	8553170	3	67,913,1897,	0,4518,6833,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	15681728	15690439	chr4:15681728-15690439	3	+	15686977	15688951	789624	2	173,4204,	0,4507,
#Partially deleted in new
chr4	15681751	15686606	chr4:15681751-15686606	0	+	15681751	15681751	8553170	2	150,371,	0,4484,
#Partially deleted in new
chr4	15681753	15686606	chr4:15681753-15686606	0	+	15681753	15681753	8553170	2	268,371,	0,4482,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	15681755	15689096	chr4:15681755-15689096	0	+	15681755	15681755	8553170	4	146,227,217,546,	0,4480,5176,6795,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	15681755	15687145	chr4:15681755-15687145	0	+	15681755	15681755	8553170	3	213,227,214,	0,4480,5176,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	15681755	15687460	chr4:15681755-15687460	0	+	15681755	15681755	8553170	3	29,227,529,	0,4480,5176,
#Partially deleted in new
chr4	15681756	15686568	chr4:15681756-15686568	0	+	15681756	15681756	8553170	3	145,110,333,	0,3093,4479,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	15681756	15687050	chr4:15681756-15687050	0	+	15686977	15687050	789624	2	212,815,	0,4479,
#Partially deleted in new
chr4	15681795	15686396	chr4:15681795-15686396	0	+	15681795	15681795	8553170	3	173,110,161,	0,3054,4440,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	15681805	15689101	chr4:15681805-15689101	1	+	15686977	15688951	789624	2	96,2866,	0,4430,
#Partially deleted in new
chr4	15681822	15686606	chr4:15681822-15686606	0	+	15681822	15681822	8553170	3	79,74,371,	0,3063,4413,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	15702949	15732173	chr4:15702949-15732173	3	+	15703144	15731845	0	9	383,127,136,83,77,93,87,60,434,	0,2565,4561,8857,12335,12757,15957,19925,28790,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	15703095	15732787	chr4:15703095-15732787	1	+	15703144	15731845	789624	10	237,45,127,136,83,77,93,87,60,1048,	0,1824,2419,4415,8711,12189,12611,15811,19779,28644,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	15707508	15723666	chr4:15707508-15723666	0	+	15707508	15723456	789624	7	138,83,77,93,87,60,232,	0,4298,7776,8198,11398,15366,15926,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	15711805	15738308	chr4:15711805-15738308	0	+	15711805	15736119	789624	7	84,77,93,87,60,79,522,	0,3479,3901,7101,11069,24247,25981,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	15715327	15738313	chr4:15715327-15738313	0	+	15715327	15737805	789624	5	34,93,87,60,527,	0,379,3579,7547,22459,
#Deleted in new
chr4	15730961	15731627	chr4:15730961-15731627	7	-	15730961	15730961	16724991	1	666,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	15743195	15743582	chr4:15743195-15743582	7	+	15743195	15743195	16724991	1	387,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	15778274	15849255	chr4:15778274-15849255	0	+	15778414	15834222	0	7	373,130,86,74,93,87,717,	0,38236,55942,59817,61751,62177,70264,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	15778277	15853230	chr4:15778277-15853230	3	+	15778414	15848602	0	8	370,130,136,86,74,93,87,4692,	0,38233,46603,55939,59814,61748,62174,70261,
#Partially deleted in new
chr4	15778297	15816754	chr4:15778297-15816754	0	+	15778297	15778297	8553170	2	350,244,	0,38213,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	15778311	15826086	chr4:15778311-15826086	0	+	15778311	15778311	8553170	3	336,130,1206,	0,38199,46569,
#Partially deleted in new
chr4	15816595	15840490	chr4:15816595-15840490	0	+	15816595	15840490	789624	6	45,118,86,74,93,39,	0,8285,17621,21496,23430,23856,
#Partially deleted in new
chr4	15864937	15865940	chr4:15864937-15865940	7	-	15864937	15864937	16724991	3	262,325,70,	0,312,933,
#Deleted in new
chr4	15935568	15938740	chr4:15935568-15938740	3	-	15935927	15936632	789624	3	1084,221,54,	0,2682,3118,
#Partially deleted in new
chr4	15960242	15963236	chr4:15960242-15963236	3	-	15962457	15963129	789624	2	369,799,	0,2195,
#Partially deleted in new
chr4	15960247	15969309	chr4:15960247-15969309	0	-	15960247	15960247	8553170	2	364,82,	0,8980,
#Partially deleted in new
chr4	15963075	15984303	chr4:15963075-15984303	0	-	15971066	15984303	789624	7	84,176,141,40,24,116,41,	0,1172,6152,7967,16805,17346,21187,
#Partially deleted in new
chr4	15968225	16076118	chr4:15968225-16076118	1	-	15971066	16075906	789624	27	1143,40,69,24,116,93,69,81,54,93,72,144,85,104,124,153,160,64,75,218,90,64,121,206,27,56,432,	0,2817,11169,11655,12196,16037,17534,17731,19437,21506,22996,24022,25761,30159,32270,38312,40723,45049,47940,50097,55100,56069,56966,65078,67509,70720,107461,
#Partially deleted in new
chr4	15968225	16076118	chr4:15968225-16076118	1	-	15971066	16075906	789624	25	1143,40,116,93,69,81,54,93,72,144,85,104,124,153,160,64,75,218,90,64,121,206,27,56,432,	0,2817,12196,16037,17534,17731,19437,21506,22996,24022,25761,30159,32270,38312,40723,45049,47940,50097,55100,56069,56966,65078,67509,70720,107461,
#Partially deleted in new
chr4	15968225	16076118	chr4:15968225-16076118	1	-	15971066	16075906	789624	26	1143,40,24,116,93,69,81,54,93,72,144,85,104,124,153,160,64,75,218,90,64,121,206,27,56,432,	0,2817,11655,12196,16037,17534,17731,19437,21506,22996,24022,25761,30159,32270,38312,40723,45049,47940,50097,55100,56069,56966,65078,67509,70720,107461,
#Partially deleted in new
chr4	15968227	16084378	chr4:15968227-16084378	1	-	15971066	16075906	789624	27	1141,40,69,24,116,93,69,81,54,93,72,144,85,104,124,153,160,64,75,218,90,64,121,206,56,432,401,	0,2815,11167,11653,12194,16035,17532,17729,19435,21504,22994,24020,25759,30157,32268,38310,40721,45047,47938,50095,55098,56067,56964,65076,70718,107459,115750,
#Partially deleted in new
chr4	15968229	16083732	chr4:15968229-16083732	1	-	15971066	16075906	789624	27	1139,40,69,24,116,93,69,81,54,93,72,144,85,104,124,153,160,64,75,218,90,64,121,206,56,432,68,	0,2813,11165,11651,12192,16033,17530,17727,19433,21502,22992,24018,25757,30155,32266,38308,40719,45045,47936,50093,55096,56065,56962,65074,70716,107457,115435,
#Partially deleted in new
chr4	15968229	15971945	chr4:15968229-15971945	0	-	15968229	15968229	8553170	2	1139,903,	0,2813,
#Partially deleted in new
chr4	15968233	16083701	chr4:15968233-16083701	3	-	15971066	16075906	789624	28	1135,40,69,24,116,93,69,81,54,93,72,144,85,104,124,153,160,64,75,218,90,64,121,206,27,56,432,37,	0,2809,11161,11647,12188,16029,17526,17723,19429,21498,22988,24014,25753,30151,32262,38304,40715,45041,47932,50089,55092,56061,56958,65070,67501,70712,107453,115431,
#Partially deleted in new
chr4	15969091	15985790	chr4:15969091-15985790	0	-	15971066	15985790	789624	6	277,40,24,116,93,31,	0,1951,10789,11330,15171,16668,
#Deleted in new
chr4	15985510	15986037	chr4:15985510-15986037	0	-	15985510	15985510	8553170	3	141,69,81,	0,249,446,
#Partially deleted in new
chr4	16003266	16075778	chr4:16003266-16075778	0	-	16055378	16075778	789624	13	83,153,160,64,75,218,90,64,121,206,56,213,92,	0,3271,5682,10008,12899,15056,20059,21028,21925,30037,35679,51970,72420,
#Partially deleted in new
chr4	16018300	16038014	chr4:16018300-16038014	0	-	16018300	16018300	8553170	6	240,90,64,121,206,39,	0,5025,5994,6891,15003,19675,
#Partially deleted in new
chr4	16075733	16083465	chr4:16075733-16083465	0	-	16075733	16075906	789624	2	385,166,	0,7566,
#Partially deleted in new
chr4	16075785	16083465	chr4:16075785-16083465	0	-	16075785	16075906	789624	2	333,234,	0,7446,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	16075863	16082608	chr4:16075863-16082608	0	-	16075863	16075906	789624	3	255,226,87,	0,564,6658,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	16075974	16080700	chr4:16075974-16080700	0	-	16075974	16075974	8553170	3	144,226,137,	0,453,4589,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	16075998	16080688	chr4:16075998-16080688	0	-	16075998	16075998	8553170	4	120,226,94,125,	0,429,3322,4565,
#Partially deleted in new
chr4	16076058	16083658	chr4:16076058-16083658	0	-	16076058	16076058	8553170	3	60,81,427,	0,6046,7173,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	16076440	16080677	chr4:16076440-16080677	0	-	16076440	16076440	8553170	3	213,203,114,	0,1660,4123,
#Partially deleted in new
chr4	16076565	16080700	chr4:16076565-16080700	0	-	16076565	16076565	8553170	4	88,203,112,137,	0,1535,3330,3998,
#Partially deleted in new
chr4	16160504	16226541	chr4:16160504-16226541	3	-	16163307	16226457	789624	14	3033,161,77,69,60,110,81,70,98,136,163,119,131,283,	0,6128,10148,13699,14165,15614,19072,26030,26276,27715,30856,41957,53263,65754,
#Partially deleted in new
chr4	16163251	16166872	chr4:16163251-16166872	0	-	16163251	16163251	8553170	2	286,240,	0,3381,
#Partially deleted in new
chr4	16163260	16226471	chr4:16163260-16226471	0	-	16191487	16226457	789624	13	277,161,77,69,60,110,81,70,98,136,163,119,213,	0,3372,7392,10943,11409,12858,16316,23274,23520,24959,28100,39201,62998,
#Partially deleted in new
chr4	16163295	16191484	chr4:16163295-16191484	0	-	16166769	16191484	789624	9	242,161,69,60,110,81,70,99,124,	0,3337,10908,11374,12823,16281,23239,24961,28065,
#Partially deleted in new
chr4	16163367	16174548	chr4:16163367-16174548	0	-	16163367	16163367	8553170	3	170,161,345,	0,3265,10836,
#Partially deleted in new
chr4	16166672	16175041	chr4:16166672-16175041	0	-	16166672	16166672	8553170	3	121,69,372,	0,7531,7997,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	16176150	16176790	chr4:16176150-16176790	0	-	16176150	16176150	8553170	2	78,313,	0,327,
#Partially deleted in new
chr4	16178938	16183120	chr4:16178938-16183120	3	+	16178938	16178938	8553170	2	141,273,	0,3909,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	16179392	16191448	chr4:16179392-16191448	0	-	16179392	16179392	8553170	5	265,70,98,136,88,	0,7142,7388,8827,11968,
#Partially deleted in new
chr4	16179489	16186814	chr4:16179489-16186814	0	-	16179489	16179489	8553170	2	168,280,	0,7045,
#Partially deleted in new
chr4	16186780	16216170	chr4:16186780-16216170	0	-	16186780	16186780	8553170	7	98,136,163,119,131,93,97,	0,1439,4580,15681,26987,27659,29293,
#Partially deleted in new
chr4	16186780	16227410	chr4:16186780-16227410	0	-	16186780	16186780	8553170	6	98,136,163,119,131,102,	0,1439,4580,15681,26987,40528,
#Partially deleted in new
chr4	16188216	16226030	chr4:16188216-16226030	0	-	16188216	16188216	8553170	5	139,163,119,131,157,	0,3144,14245,25551,37657,
#Partially deleted in new
chr4	16188222	16214633	chr4:16188222-16214633	0	-	16188222	16188222	8553170	5	133,163,119,131,194,	0,3138,14239,25545,26217,
#Partially deleted in new
chr4	16188231	16196723	chr4:16188231-16196723	0	-	16188231	16188231	8553170	4	124,224,163,66,	0,1815,3129,8426,
#Partially deleted in new
chr4	16188274	16202582	chr4:16188274-16202582	0	-	16196689	16202582	789624	4	81,163,66,121,	0,3086,8383,14187,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	16190338	16226449	chr4:16190338-16226449	0	-	16190338	16190338	8553170	2	1185,191,	0,35920,
#Partially deleted in new
chr4	16202538	16226060	chr4:16202538-16226060	0	-	16202538	16202538	8553170	4	42,131,123,187,	0,11229,11901,23335,
#Partially deleted in new
chr4	16226684	16256744	chr4:16226684-16256744	0	+	16226684	16226684	8553170	3	493,101,437,	0,12086,29623,
#Partially deleted in new
chr4	16227006	16320140	chr4:16227006-16320140	3	+	16227006	16227006	8553170	4	171,101,162,76,	0,11764,61877,93058,
#Partially deleted in new
chr4	16227044	16258187	chr4:16227044-16258187	1	+	16227044	16227044	789624	3	133,101,1931,	0,11726,29212,
#Deleted in new
chr4	16256307	16256555	chr4:16256307-16256555	7	-	16256307	16256307	16724991	1	248,	0,
#Deleted in new
chr4	16307455	16308167	chr4:16307455-16308167	7	+	16307455	16307455	16724991	1	712,	0,
#Deleted in new
chr4	16360685	16361826	chr4:16360685-16361826	5	-	16360685	16360685	16724991	1	1141,	0,
#Partially deleted in new
chr4	16360883	16397323	chr4:16360883-16397323	7	-	16360883	16360883	16724991	3	105,4,793,	0,27035,35647,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	16400429	16512187	chr4:16400429-16512187	3	+	16400429	16400429	8553170	3	104,76,255,	0,25935,111503,
#Partially deleted in new
chr4	16402197	16434242	chr4:16402197-16434242	1	+	16402197	16402197	8553170	4	35,74,76,186,	0,18862,24167,31859,
#Partially deleted in new
chr4	16501540	16898809	chr4:16501540-16898809	3	-	16502642	16898485	789624	8	1333,152,124,84,123,173,103,456,	0,6994,10440,84381,87169,94162,257617,396813,
#Partially deleted in new
chr4	16501540	16898594	chr4:16501540-16898594	1	-	16505877	16898485	789624	9	1333,143,152,124,84,123,173,103,241,	0,4299,6994,10440,84381,87169,94162,257617,396813,
#Partially deleted in new
chr4	16501540	16898562	chr4:16501540-16898562	1	-	16502642	16898485	789624	8	1333,146,124,84,123,173,103,209,	0,7000,10440,84381,87169,94162,257617,396813,
#Deleted in new
chr4	16501543	16507227	chr4:16501543-16507227	0	-	16501543	16501543	8553170	2	1330,1388,	0,4296,
#Partially deleted in new
chr4	16501545	16898634	chr4:16501545-16898634	1	-	16503080	16898485	789624	8	1586,152,124,84,123,173,103,281,	0,6989,10435,84376,87164,94157,257612,396808,
#Partially deleted in new
chr4	16502041	16595875	chr4:16502041-16595875	0	-	16502642	16595875	789624	6	832,149,124,84,123,173,	0,6493,9939,83880,86668,93661,
#Partially deleted in new
chr4	16502793	16898634	chr4:16502793-16898634	0	-	16674221	16898485	789624	9	338,152,124,84,123,173,120,103,281,	0,5741,9187,83128,85916,92909,171406,256364,395560,
#Partially deleted in new
chr4	16511984	16898621	chr4:16511984-16898621	0	-	16595841	16898485	789624	7	120,84,123,173,52,103,268,	0,73937,76725,83718,240422,247173,386369,
#Partially deleted in new
chr4	16512004	16653819	chr4:16512004-16653819	0	-	16512004	16512004	8553170	5	100,84,123,173,93,	0,73917,76705,83698,141722,
#Partially deleted in new
chr4	16585949	16726502	chr4:16585949-16726502	0	-	16585949	16585949	8553170	5	56,123,173,54,168,	0,2760,9753,65215,140385,
#Partially deleted in new
chr4	16585971	16898660	chr4:16585971-16898660	0	-	16585971	16898413	789624	6	34,123,173,103,76,58,	0,2738,9731,173186,312382,312631,
#Partially deleted in new
chr4	16585975	16626993	chr4:16585975-16626993	0	-	16585975	16585975	8553170	4	30,123,173,257,	0,2734,9727,40761,
#Partially deleted in new
chr4	16588708	16759375	chr4:16588708-16759375	0	-	16588708	16588708	8553170	3	124,173,218,	0,6994,170449,
#Partially deleted in new
chr4	16588709	16826560	chr4:16588709-16826560	0	-	16588709	16588709	8553170	4	123,173,103,131,	0,6993,170448,237720,
#Partially deleted in new
chr4	16741454	16898678	chr4:16741454-16898678	0	-	16741454	16741454	8553170	4	82,52,103,325,	0,10952,17703,156899,
#Partially deleted in new
chr4	16750849	16898378	chr4:16750849-16898378	0	-	16750849	16750849	789624	7	78,52,103,85,127,29,25,	0,1557,8308,137824,138391,142221,147504,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	16973274	17073903	chr4:16973274-17073903	3	-	16973274	16973274	8553170	3	297,99,55,	0,87432,100574,
#Deleted in new
chr4	17061877	17062165	chr4:17061877-17062165	7	+	17061877	17061877	16724991	1	288,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	17171756	17186059	chr4:17171756-17186059	3	-	17171756	17171756	789624	6	47,136,173,1094,45,209,	0,376,3159,3735,10095,14094,
#Deleted in new
chr4	17320745	17320882	chr4:17320745-17320882	3	-	17320745	17320745	5263520	1	137,	0,
#Partially deleted in new
chr4	17427695	17428274	chr4:17427695-17428274	7	-	17427695	17427695	16724991	1	579,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	17460260	17512089	chr4:17460260-17512089	1	-	17490722	17512054	789624	7	575,58,84,141,97,93,140,	0,26918,30401,41458,44118,49010,51689,
#Partially deleted in new
chr4	17486397	17512234	chr4:17486397-17512234	3	-	17487130	17512054	0	7	839,84,109,141,97,93,285,	0,4264,5834,15321,17981,22873,25552,
#Partially deleted in new
chr4	17486397	17512069	chr4:17486397-17512069	0	-	17490722	17512054	789624	6	839,84,141,97,93,120,	0,4264,15321,17981,22873,25552,
#Partially deleted in new
chr4	17486526	17512086	chr4:17486526-17512086	1	-	17487130	17512054	0	6	710,84,109,141,97,137,	0,4135,5705,15192,17852,25423,
#Partially deleted in new
chr4	17486799	17492513	chr4:17486799-17492513	0	-	17486799	17486799	8553170	3	437,84,282,	0,3862,5432,
#Partially deleted in new
chr4	17487104	17512087	chr4:17487104-17512087	1	-	17487183	17512054	789624	5	132,141,97,93,138,	0,14614,17274,22166,24845,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	17487169	17512206	chr4:17487169-17512206	0	-	17509969	17512054	789624	7	67,84,141,97,93,42,257,	0,3492,14549,17209,22101,22764,24780,
#Partially deleted in new
chr4	17490040	17511981	chr4:17490040-17511981	0	-	17490722	17511981	789624	5	705,141,97,93,32,	0,11678,14338,19230,21909,
#Partially deleted in new
chr4	17490438	17492508	chr4:17490438-17492508	0	-	17490438	17490438	8553170	2	307,277,	0,1793,
#Partially deleted in new
chr4	17515164	17527104	chr4:17515164-17527104	3	+	17515266	17527082	789624	3	355,180,288,	0,7699,11652,
#Deleted in new
chr4	17552116	17552752	chr4:17552116-17552752	7	-	17552116	17552116	16724991	1	636,	0,
#Deleted in new
chr4	17557891	17558045	chr4:17557891-17558045	7	-	17557891	17557891	16724991	1	154,	0,
#Partially deleted in new
chr4	17577191	17607968	chr4:17577191-17607968	3	+	17577465	17607589	789624	13	376,116,55,106,160,165,159,125,89,103,80,110,569,	0,2632,4568,5096,6291,7780,11627,18218,19854,21264,27396,29637,30208,
#Partially deleted in new
chr4	17577303	17607967	chr4:17577303-17607967	1	+	17577465	17607589	789624	13	264,116,55,106,160,165,159,125,89,103,80,110,568,	0,2520,4456,4984,6179,7668,11515,18106,19742,21152,27284,29525,30096,
#Partially deleted in new
chr4	17577425	17582152	chr4:17577425-17582152	0	+	17577425	17577425	8553170	3	142,116,393,	0,2398,4334,
#Partially deleted in new
chr4	17577451	17582689	chr4:17577451-17582689	0	+	17577451	17577451	8553170	4	116,116,55,402,	0,2372,4308,4836,
#Partially deleted in new
chr4	17577494	17607934	chr4:17577494-17607934	1	+	17577558	17607589	789624	13	73,116,55,106,160,165,159,125,89,103,80,110,535,	0,2329,4265,4793,5988,7477,11324,17915,19551,20961,27093,29334,29905,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	17577496	17585456	chr4:17577496-17585456	0	+	17577496	17583599	789624	5	71,116,55,160,485,	0,2327,4263,5986,7475,
#Deleted in new
chr4	17582379	17585051	chr4:17582379-17585051	0	+	17582379	17582379	8553170	3	195,160,80,	0,1103,2592,
#Partially deleted in new
chr4	17583430	17586067	chr4:17583430-17586067	0	+	17583430	17583430	8553170	3	212,165,117,	0,1541,2520,
#Partially deleted in new
chr4	17583601	17606884	chr4:17583601-17606884	0	+	17583601	17606884	789624	6	41,165,159,125,80,56,	0,1370,5217,11808,20986,23227,
#Partially deleted in new
chr4	17584800	17604667	chr4:17584800-17604667	0	+	17584800	17584800	8553170	7	92,165,159,125,89,103,80,	0,171,4018,10609,12245,13655,19787,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	17585768	17607972	chr4:17585768-17607972	0	+	17585768	17585768	8553170	8	470,159,125,89,103,80,110,573,	0,3050,9641,11277,12687,18819,21060,21631,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	17587466	17614571	chr4:17587466-17614571	3	-	17587466	17587466	8553170	3	213,107,430,	0,26465,26675,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	17614630	17634105	chr4:17614630-17634105	3	+	17614654	17623798	789624	4	183,67,113,10505,	0,5270,6956,8970,
#Partially deleted in new
chr4	17614647	17620081	chr4:17614647-17620081	0	+	17614647	17614647	8553170	2	166,181,	0,5253,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	17614663	17628170	chr4:17614663-17628170	0	+	17614663	17625671	789624	6	150,67,113,194,190,165,	0,5237,6923,8937,10992,13342,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr4	17629305	17781512	chr4:17629305-17781512	3	-	17632531	17781299	789624	18	3320,200,105,118,147,173,155,154,213,130,98,108,111,207,140,136,753,354,	0,4383,5703,7222,9944,12750,18331,23524,29044,30652,35256,59118,63996,75694,76446,78343,79586,151853,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	17630923	17632439	chr4:17630923-17632439	0	+	17630923	17630923	8553170	2	452,154,	0,1362,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	17800654	17810758	chr4:17800654-17810758	3	-	17803490	17804141	789624	3	4117,119,312,	0,4452,9792,
#Partially deleted in new
chr4	17804311	17810758	chr4:17804311-17810758	0	-	17804311	17804311	8553170	2	445,312,	0,6135,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	17809424	17810711	chr4:17809424-17810711	0	-	17809424	17809424	8553170	2	268,265,	0,1022,
#Partially deleted in new
chr4	17810901	17844862	chr4:17810901-17844862	3	+	17811077	17843425	789624	21	287,204,229,146,85,193,150,141,124,90,180,111,120,225,182,175,162,139,87,70,1561,	0,1319,2015,3951,4372,6359,7037,12081,12745,14066,14480,17376,20095,23397,26257,26725,28774,29169,29705,31408,32400,
#Partially deleted in new
chr4	17811021	17843448	chr4:17811021-17843448	0	+	17811077	17817269	789624	20	167,204,229,146,193,150,141,99,90,180,111,120,225,182,175,162,139,87,70,147,	0,1199,1895,3831,6239,6917,11961,12650,13946,14360,17256,19975,23277,26137,26605,28654,29049,29585,31288,32280,
#Deleted in new
chr4	17811027	17813346	chr4:17811027-17813346	0	+	17811027	17811027	8553170	3	161,204,430,	0,1193,1889,
#Partially deleted in new
chr4	17817231	17823147	chr4:17817231-17823147	0	+	17817231	17817231	8553170	3	222,150,165,	0,707,5751,
#Partially deleted in new
chr4	17823698	17837161	chr4:17823698-17837161	0	+	17823698	17837161	789624	7	72,90,186,111,120,225,3,	0,1269,1683,4579,7298,10600,13460,
#Partially deleted in new
chr4	17841198	18021876	chr4:17841198-18021876	1	-	17845720	18021751	789624	7	4703,94,252,130,80,66,279,	0,44869,67895,120704,121771,131621,180399,
#Partially deleted in new
chr4	17841198	18021876	chr4:17841198-18021876	3	-	17845887	18021751	789624	8	4703,4826,94,252,130,80,66,279,	0,32189,44869,67895,120704,121771,131621,180399,
#Partially deleted in new
chr4	17841879	18021743	chr4:17841879-18021743	0	-	17962012	18021743	789624	8	4022,3447,1274,94,252,130,66,146,	0,31508,35060,44188,67214,120023,130940,179718,
#Partially deleted in new
chr4	17845496	18021757	chr4:17845496-18021757	0	-	17962012	18021751	789624	5	405,252,130,66,160,	0,63597,116406,127323,176101,
#Partially deleted in new
chr4	17845639	17962032	chr4:17845639-17962032	0	-	17845639	17845639	8553170	3	262,94,130,	0,40428,116263,
#Partially deleted in new
chr4	17880594	18020734	chr4:17880594-18020734	1	-	17883719	17963017	789624	7	4158,94,252,130,80,66,204,	0,5473,28499,81308,82375,92225,139936,
#Partially deleted in new
chr4	17880628	18021860	chr4:17880628-18021860	1	-	17883719	18021751	789624	7	4124,94,252,130,80,66,263,	0,5439,28465,81274,82341,92191,140969,
#Partially deleted in new
chr4	17911673	17912976	chr4:17911673-17912976	7	+	17911673	17911673	16724991	2	828,151,	0,1152,
#Partially deleted in new
chr4	17960245	18021755	chr4:17960245-18021755	0	-	17960245	17960245	8553170	5	66,130,80,66,158,	0,1657,2724,12574,61352,
#Deleted in new
chr4	18488061	18489508	chr4:18488061-18489508	3	-	18488061	18488061	8553170	2	312,222,	0,1225,
#Partially deleted in new
chr4	19098198	19098740	chr4:19098198-19098740	3	+	19098198	19098198	8553170	1	542,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	19172334	19456994	chr4:19172334-19456994	3	-	19172334	19172334	8553170	3	192,100,349,	0,161329,284311,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	19257950	19258337	chr4:19257950-19258337	3	-	19257950	19257950	8553170	1	387,	0,
#Partially deleted in new
chr4	19455435	19909692	chr4:19455435-19909692	3	+	19455435	19455435	8553170	4	217,71,120,481,	0,78112,400840,453776,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	19747178	19754591	chr4:19747178-19754591	3	-	19747178	19747178	8553170	2	140,99,	0,7314,
#Partially deleted in new
chr4	19813748	19814231	chr4:19813748-19814231	7	+	19813748	19813748	16724991	1	483,	0,
#Partially deleted in new
chr4	20037559	20037972	chr4:20037559-20037972	7	-	20037559	20037559	16724991	1	413,	0,
#Partially deleted in new
chr4	20253259	20619120	chr4:20253259-20619120	1	+	20253815	20619009	0	36	735,72,72,72,72,72,72,164,139,72,72,72,144,164,151,75,144,144,167,133,69,72,72,72,164,125,98,140,94,138,241,131,155,289,212,353,	0,3412,4608,15550,214492,227456,232940,235559,238501,257235,257806,266122,270500,270754,275689,278724,280312,286181,288193,289234,292771,295228,295797,297567,300545,314002,314258,315605,336384,342437,343155,345005,356753,363650,364179,365508,
#Partially deleted in new
chr4	20253563	20620557	chr4:20253563-20620557	3	+	20253815	20619009	0	37	431,72,72,72,72,72,72,164,139,72,72,72,144,164,24,151,75,144,144,167,133,69,72,72,72,164,125,98,140,94,138,241,131,155,289,212,1790,	0,3108,4304,15246,214188,227152,232636,235255,238197,256931,257502,265818,270196,270450,271585,275385,278420,280008,285877,287889,288930,292467,294924,295493,297263,300241,313698,313954,315301,336080,342133,342851,344701,356449,363346,363875,365204,
#Partially deleted in new
chr4	20253589	20619286	chr4:20253589-20619286	1	+	20253815	20619009	789624	39	405,72,72,72,72,72,72,164,12,139,72,72,72,144,164,24,151,75,144,144,167,133,69,72,72,72,164,125,98,140,27,94,138,241,131,155,289,212,519,	0,3082,4278,15220,214162,227126,232610,235229,237213,238171,256905,257476,265792,270170,270424,271559,275359,278394,279982,285851,287863,288904,292441,294898,295467,297237,300215,313672,313928,315275,319644,336054,342107,342825,344675,356423,363320,363849,365178,
#Partially deleted in new
chr4	20253815	20619183	chr4:20253815-20619183	1	+	20253815	20619009	0	37	179,72,72,72,72,72,72,164,12,139,72,72,72,144,164,151,75,144,144,167,133,69,72,72,72,164,125,98,140,94,138,241,131,155,289,212,416,	0,2856,4052,14994,213936,226900,232384,235003,236987,237945,256679,257250,265566,269944,270198,275133,278168,279756,285625,287637,288678,292215,294672,295241,297011,299989,313446,313702,315049,335828,341881,342599,344449,356197,363094,363623,364952,
#Partially deleted in new
chr4	20254919	20486215	chr4:20254919-20486215	0	+	20255013	20486215	789624	7	156,72,72,72,72,72,16,	0,1752,2948,13890,212832,225796,231280,
#Deleted in new
chr4	20528274	20528384	chr4:20528274-20528384	3	+	20528274	20528274	5263520	1	110,	0,
#Partially deleted in new
chr4	20533398	20539566	chr4:20533398-20539566	0	+	20533398	20533398	8553170	2	317,126,	0,6042,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	20542493	20552721	chr4:20542493-20552721	0	+	20542493	20542493	8553170	6	133,69,72,72,72,294,	0,3537,5994,6563,8333,9934,
#Partially deleted in new
chr4	20542618	20568918	chr4:20542618-20568918	0	+	20548539	20568918	789624	10	8,69,72,72,72,164,33,125,98,54,	0,3412,5869,6438,8208,11186,11689,24643,24899,26246,
#Partially deleted in new
chr4	20553852	20569264	chr4:20553852-20569264	0	+	20553852	20569114	789624	4	116,125,98,400,	0,13409,13665,15012,
#Partially deleted in new
chr4	20598352	20620561	chr4:20598352-20620561	0	+	20598352	20620415	789624	4	43,155,38,158,	0,11660,18557,22051,
#Deleted in new
chr4	20614862	20619166	chr4:20614862-20619166	0	+	20614862	20614862	8553170	3	2336,212,399,	0,2576,3905,
#Partially deleted in new
chr4	20696281	20752907	chr4:20696281-20752907	0	+	20704481	20727341	789624	10	232,68,155,68,91,135,108,81,113,343,	0,8184,8378,11521,13401,16506,17150,28526,31003,56283,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	20700412	20728357	chr4:20700412-20728357	1	+	20704481	20727341	789624	8	375,68,155,68,91,135,108,1073,	0,4053,4247,7390,9270,12375,13019,26872,
#Partially deleted in new
chr4	20700412	20727785	chr4:20700412-20727785	3	+	20704481	20727341	789624	9	375,68,155,68,91,135,108,81,501,	0,4053,4247,7390,9270,12375,13019,24395,26872,
#Partially deleted in new
chr4	20700412	20713521	chr4:20700412-20713521	0	+	20701837	20713521	789624	9	166,127,81,68,155,68,91,135,90,	0,1345,1728,4053,4247,7390,9270,12375,13019,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	20700418	20728316	chr4:20700418-20728316	1	+	20704481	20727341	789624	9	199,81,68,155,68,91,135,108,1032,	0,1722,4047,4241,7384,9264,12369,13013,26866,
#Partially deleted in new
chr4	20700426	20709774	chr4:20700426-20709774	0	+	20704481	20709774	789624	8	152,117,127,81,68,155,68,92,	0,244,1331,1714,4039,4233,7376,9256,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	20700435	20728321	chr4:20700435-20728321	1	+	20704481	20727341	789624	5	352,68,155,108,1037,	0,4030,4224,12996,26849,
#Deleted in new
chr4	20700437	20702694	chr4:20700437-20702694	0	+	20700437	20700437	8553170	4	269,127,81,20,	0,1320,1703,2237,
#Deleted in new
chr4	20700438	20701884	chr4:20700438-20701884	0	+	20701837	20701884	789624	3	349,149,127,	0,1080,1319,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	20700457	20727589	chr4:20700457-20727589	1	+	20704481	20727295	789624	7	121,68,155,135,108,142,305,	0,4008,4202,12330,12974,15649,26827,
#Partially deleted in new
chr4	20700457	20707849	chr4:20700457-20707849	0	+	20704481	20707849	789624	5	330,81,68,155,47,	0,1683,4008,4202,7345,
#Partially deleted in new
chr4	20700457	20727502	chr4:20700457-20727502	0	+	20704481	20712794	789624	8	154,68,155,68,135,108,81,218,	0,4008,4202,7345,12330,12974,24350,26827,
#Partially deleted in new
chr4	20700457	20712831	chr4:20700457-20712831	0	+	20704481	20712831	789624	6	154,68,155,68,91,44,	0,4008,4202,7345,9225,12330,
#Partially deleted in new
chr4	20700457	20713516	chr4:20700457-20713516	0	+	20704481	20713516	789624	5	121,68,155,135,85,	0,4008,4202,12330,12974,
#Partially deleted in new
chr4	20700457	20709714	chr4:20700457-20709714	0	+	20704481	20709714	789624	6	160,90,68,155,68,32,	0,2193,4008,4202,7345,9225,
#Partially deleted in new
chr4	20700457	20713461	chr4:20700457-20713461	0	+	20704481	20713461	789624	4	290,68,155,30,	0,4008,4202,12974,
#Partially deleted in new
chr4	20700458	20727542	chr4:20700458-20727542	1	+	20704481	20727341	789624	4	329,68,155,258,	0,4007,4201,26826,
#Partially deleted in new
chr4	20700458	20707870	chr4:20700458-20707870	0	+	20704481	20707870	789624	5	248,81,68,155,68,	0,1682,4007,4201,7344,
#Partially deleted in new
chr4	20700458	20752900	chr4:20700458-20752900	0	+	20704481	20727341	789624	9	159,68,155,68,91,135,108,113,336,	0,4007,4201,7344,9224,12329,12973,26826,52106,
#Deleted in new
chr4	20700458	20704524	chr4:20700458-20704524	0	+	20704481	20704524	789624	4	289,127,81,59,	0,1299,1682,4007,
#Partially deleted in new
chr4	20700458	20713540	chr4:20700458-20713540	0	+	20704481	20713540	789624	7	289,68,155,68,91,135,109,	0,4007,4201,7344,9224,12329,12973,
#Partially deleted in new
chr4	20700458	20713540	chr4:20700458-20713540	0	+	20704481	20713540	789624	4	248,68,155,109,	0,4007,4201,12973,
#Deleted in new
chr4	20700459	20702196	chr4:20700459-20702196	0	+	20701837	20702196	789624	3	328,159,56,	0,1266,1681,
#Deleted in new
chr4	20700465	20701854	chr4:20700465-20701854	0	+	20701837	20701854	8553170	3	322,158,97,	0,1044,1292,
#Partially deleted in new
chr4	20700471	20752861	chr4:20700471-20752861	1	+	20704481	20727341	789624	9	107,68,155,68,91,135,108,113,297,	0,3994,4188,7331,9211,12316,12960,26813,52093,
#Partially deleted in new
chr4	20700472	20713538	chr4:20700472-20713538	0	+	20704481	20712794	789624	6	315,68,155,68,135,107,	0,3993,4187,7330,12315,12959,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	20700475	20728319	chr4:20700475-20728319	1	+	20704481	20727341	789624	6	272,68,155,135,108,1035,	0,3990,4184,12312,12956,26809,
#Partially deleted in new
chr4	20700476	20752888	chr4:20700476-20752888	0	+	20704481	20727341	789624	9	311,68,155,68,91,135,108,113,324,	0,3989,4183,7326,9206,12311,12955,26808,52088,
#Partially deleted in new
chr4	20700480	20713541	chr4:20700480-20713541	0	+	20704481	20713541	789624	6	98,81,68,155,135,110,	0,1660,3985,4179,12307,12951,
#Partially deleted in new
chr4	20707801	20709836	chr4:20707801-20709836	0	+	20707801	20709818	789624	2	69,154,	0,1881,
#Partially deleted in new
chr4	20712698	20724889	chr4:20712698-20724889	0	+	20712698	20712698	8553170	3	224,108,82,	0,733,12109,
#Partially deleted in new
chr4	20713075	20727397	chr4:20713075-20727397	0	+	20713075	20713075	8553170	2	464,113,	0,14209,
#Partially deleted in new
chr4	20728615	20850779	chr4:20728615-20850779	1	-	20730081	20850644	789624	7	1514,63,105,108,71,70,237,	0,3390,4065,6012,21046,30205,121927,
#Partially deleted in new
chr4	20728615	21697774	chr4:20728615-21697774	1	-	20730081	21697437	789624	8	1514,63,105,108,71,70,125,425,	0,3390,4065,6012,21046,30205,121927,968734,
#Partially deleted in new
chr4	20729205	21948745	chr4:20729205-21948745	1	-	20730081	21948631	789624	8	924,63,105,108,71,70,125,175,	0,2800,3475,5422,20456,29615,121337,1219365,
#Partially deleted in new
chr4	20729209	21303989	chr4:20729209-21303989	3	-	20730081	21303906	789624	8	920,63,105,108,71,70,125,183,	0,2796,3471,5418,20452,29611,121333,574597,
#Partially deleted in new
chr4	20729235	21948799	chr4:20729235-21948799	1	-	20730081	21948631	789624	9	894,63,105,108,71,70,125,102,229,	0,2770,3445,5392,20426,29585,121307,153372,1219335,
#Partially deleted in new
chr4	20729915	20984041	chr4:20729915-20984041	1	-	20730081	20983925	789624	8	214,63,105,108,71,70,125,228,	0,2090,2765,4712,19746,28905,120627,253898,
#Partially deleted in new
chr4	20730081	21948631	chr4:20730081-21948631	0	-	21762988	21948631	789624	9	48,63,105,108,71,70,125,112,61,	0,1924,2599,4546,19580,28739,120461,1032839,1218489,
#Deleted in new
chr4	20766807	20767372	chr4:20766807-20767372	3	+	20766807	20766807	8553170	1	565,	0,
#Partially deleted in new
chr4	20850314	20882710	chr4:20850314-20882710	0	-	20850314	20850314	8553170	2	349,107,	0,32289,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	21304541	21316485	chr4:21304541-21316485	3	+	21304541	21304541	8553170	3	72,65,204,	0,10734,11740,
#Deleted in new
chr4	21464699	21464758	chr4:21464699-21464758	3	-	21464699	21464699	5263520	1	59,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	21582095	21613728	chr4:21582095-21613728	3	+	21582095	21582095	789624	4	30,158,136,397,	0,122,26714,31236,
#Deleted in new
chr4	21656510	21656869	chr4:21656510-21656869	7	-	21656510	21656510	16724991	1	359,	0,
#Partially deleted in new
chr4	21697449	21719026	chr4:21697449-21719026	3	+	21697449	21697449	8553170	2	398,550,	0,21027,
#Partially deleted in new
chr4	21729849	21855715	chr4:21729849-21855715	0	-	21729849	21729849	8553170	3	263,112,46,	0,33071,125820,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	21843340	21853188	chr4:21843340-21853188	3	-	21843340	21843340	5263520	1	9848,	0,
#Partially deleted in new
chr4	21949014	22330330	chr4:21949014-22330330	3	+	21949014	21949014	8553170	4	445,277,137,1015,	0,110069,152479,380301,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	22118982	22119089	chr4:22118982-22119089	3	+	22118982	22118982	8553170	1	107,	0,
#Partially deleted in new
chr4	22387374	22516054	chr4:22387374-22516054	3	-	22387704	22515784	789624	19	1573,96,146,124,125,209,214,204,162,156,202,165,214,161,72,72,72,72,527,	0,1713,5170,14056,15300,25807,26226,33511,36816,47936,49065,50881,55275,57598,60065,67491,74362,86397,128153,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	22387399	22394868	chr4:22387399-22394868	0	-	22387399	22387399	8553170	3	1548,96,2324,	0,1688,5145,
#Partially deleted in new
chr4	22387707	22455834	chr4:22387707-22455834	0	-	22387707	22387707	8553170	17	1240,96,146,124,125,209,160,204,162,156,202,165,214,161,72,72,26,	0,1380,4837,13723,14967,25474,25893,33178,36483,47603,48732,50548,54942,57265,59732,67158,68101,
#Partially deleted in new
chr4	22392544	22413315	chr4:22392544-22413315	0	-	22392544	22392544	8553170	2	146,134,	0,20637,
#Deleted in new
chr4	22413205	22414086	chr4:22413205-22414086	0	-	22413205	22413205	8553170	2	185,486,	0,395,
#Partially deleted in new
chr4	22414193	22443135	chr4:22414193-22443135	1	-	22414591	22443107	789624	8	413,204,162,156,202,165,214,56,	0,6692,9997,21117,22246,24062,28456,28886,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	22420037	22515997	chr4:22420037-22515997	1	-	22420843	22515784	789624	12	1052,162,156,202,165,214,161,72,72,72,72,470,	0,4153,15273,16402,18218,22612,24935,27402,34828,41699,53734,95490,
#Partially deleted in new
chr4	22438257	22473818	chr4:22438257-22473818	0	-	22438257	22442777	789624	7	163,214,93,72,72,72,47,	0,4392,6783,9182,16608,23479,35514,
#Partially deleted in new
chr4	22442649	22473806	chr4:22442649-22473806	0	-	22442649	22442649	8553170	5	214,161,72,72,35,	0,2323,4790,19087,31122,
#Partially deleted in new
chr4	22444999	22514580	chr4:22444999-22514580	0	-	22444999	22444999	8553170	6	134,72,72,72,72,116,	0,2440,9866,16737,28772,69465,
#Partially deleted in new
chr4	22447439	22478236	chr4:22447439-22478236	0	-	22447439	22447439	8553170	6	72,72,72,72,53,144,	0,7426,14297,26332,30184,30653,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	22473019	22515696	chr4:22473019-22515696	0	-	22473019	22473019	8553170	3	212,72,169,	0,752,42508,
#Deleted in new
chr4	22594195	22594450	chr4:22594195-22594450	7	+	22594195	22594195	16724991	1	255,	0,
#Partially deleted in new
chr4	22692913	22819575	chr4:22692913-22819575	1	+	22693015	22818923	789624	5	160,228,797,124,855,	0,43067,54382,55923,125807,
#Partially deleted in new
chr4	22692913	22819568	chr4:22692913-22819568	3	+	22693015	22818923	789624	6	160,228,797,124,158,687,	0,43067,54382,55923,125807,125968,
#Partially deleted in new
chr4	22692913	22819568	chr4:22692913-22819568	1	+	22693015	22818923	789624	4	160,228,158,687,	0,43067,125807,125968,
#Partially deleted in new
chr4	22692924	22819575	chr4:22692924-22819575	1	+	22693015	22818923	789624	3	149,228,855,	0,43056,125796,
#Partially deleted in new
chr4	22714088	22819527	chr4:22714088-22819527	1	+	22747522	22818923	789624	5	62,228,797,124,807,	0,21892,33207,34748,104632,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	22714091	22715496	chr4:22714091-22715496	0	+	22714091	22714091	8553170	2	59,541,	0,864,
#Deleted in new
chr4	22727374	22727950	chr4:22727374-22727950	7	-	22727374	22727374	16724991	1	576,	0,
#Partially deleted in new
chr4	22754412	22819282	chr4:22754412-22819282	0	+	22754412	22754412	8553170	2	165,562,	0,64308,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	22997550	23056862	chr4:22997550-23056862	3	+	22997550	22997550	8553170	4	63,128,94,1024,	0,2034,5599,58288,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	22999585	23041015	chr4:22999585-23041015	0	+	22999585	22999585	8553170	3	127,94,326,	0,3564,41104,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	23003152	23041518	chr4:23003152-23041518	1	+	23003152	23003152	8553170	3	91,37,829,	0,29679,37537,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	23105501	23123487	chr4:23105501-23123487	3	+	23105501	23105501	8553170	5	115,97,166,62,106,	0,14818,15894,16873,17880,
#Partially deleted in new
chr4	23234624	23285573	chr4:23234624-23285573	3	-	23234624	23234624	8553170	2	434,137,	0,50812,
#Deleted in new
chr4	23514939	23515284	chr4:23514939-23515284	7	-	23514939	23514939	16724991	1	345,	0,
#Partially deleted in new
chr4	23560922	23768652	chr4:23560922-23768652	0	+	23560922	23560922	8553170	2	117,334,	0,207396,
#Partially deleted in new
chr4	23755040	23882111	chr4:23755040-23882111	0	-	23755040	23755040	8553170	15	171,100,100,152,122,121,105,916,74,46,83,205,123,195,191,	0,10073,40785,46689,47183,57706,57980,58649,69239,69422,70126,73359,74422,76516,126880,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	23762926	23768625	chr4:23762926-23768625	3	+	23762926	23762926	8553170	2	252,307,	0,5392,
#Partially deleted in new
chr4	23779589	23782560	chr4:23779589-23782560	3	+	23779589	23779589	8553170	3	92,38,312,	0,2513,2659,
#Partially deleted in new
chr4	23792020	23890077	chr4:23792020-23890077	3	-	23795821	23889957	0	13	3905,152,122,121,105,916,74,46,205,123,195,180,174,	0,9709,10203,20726,21000,21669,32259,32442,36379,37442,39536,92731,97883,
#Partially deleted in new
chr4	23795338	23881292	chr4:23795338-23881292	1	-	23795821	23831604	0	12	587,152,122,121,105,916,74,46,205,123,195,564,	0,6391,6885,17408,17682,18351,28941,29124,33061,34124,36218,85390,
#Partially deleted in new
chr4	23795697	23890032	chr4:23795697-23890032	0	-	23824371	23889957	0	13	228,152,122,121,105,916,105,46,205,123,195,180,129,	0,6032,6526,17049,17323,17992,28582,28765,32702,33765,35859,89054,94206,
#Partially deleted in new
chr4	23814332	23890035	chr4:23814332-23890035	0	-	23820609	23889957	0	9	273,204,74,46,205,123,195,180,132,	0,6102,9947,10130,14067,15130,17224,70419,75571,
#Partially deleted in new
chr4	23814388	23882132	chr4:23814388-23882132	0	-	23814388	23814388	8553170	9	217,204,74,46,205,123,195,152,175,	0,6046,9891,10074,14011,15074,17168,63325,67569,
#Partially deleted in new
chr4	23820609	23890077	chr4:23820609-23890077	1	-	23820609	23889945	789624	8	29,74,46,205,123,195,180,174,	0,3670,3853,7790,8853,10947,64142,69294,
#Partially deleted in new
chr4	23824371	23890077	chr4:23824371-23890077	1	-	23824371	23889945	789624	7	13,46,205,123,195,180,174,	0,91,4028,5091,7185,60380,65532,
#Deleted in new
chr4	23828489	23829671	chr4:23828489-23829671	0	-	23828489	23828489	8553170	2	115,209,	0,973,
#Partially deleted in new
chr4	23828561	23882111	chr4:23828561-23882111	0	-	23828561	23828561	8553170	4	43,123,256,154,	0,901,2934,53396,
#Partially deleted in new
chr4	23831528	23882132	chr4:23831528-23882132	0	-	23831528	23831528	8553170	3	223,152,175,	0,46185,50429,
#Partially deleted in new
chr4	23831706	23899318	chr4:23831706-23899318	0	-	23831706	23831706	8553170	4	45,180,82,52,	0,53045,58425,67560,
#Partially deleted in new
chr4	23866119	23890029	chr4:23866119-23890029	0	-	23866119	23866119	8553170	3	127,180,126,	0,18632,23784,
#Partially deleted in new
chr4	23875781	23884931	chr4:23875781-23884931	0	-	23875781	23875781	8553170	2	200,180,	0,8970,
#Deleted in new
chr4	23877695	23882113	chr4:23877695-23882113	0	-	23877695	23877695	8553170	3	170,80,156,	0,2253,4262,
#Deleted in new
chr4	23881087	23882103	chr4:23881087-23882103	0	-	23881087	23881087	8553170	2	222,326,	0,690,
#Deleted in new
chr4	23882678	23890035	chr4:23882678-23890035	1	-	23884685	23889957	789624	2	2253,132,	0,7225,
#Partially deleted in new
chr4	23884498	23904089	chr4:23884498-23904089	0	-	23884498	23884498	8553170	2	433,96,	0,19495,
#Partially deleted in new
chr4	24517440	24532951	chr4:24517440-24532951	0	-	24517440	24517440	8553170	3	212,170,88,	0,12160,15423,
#Deleted in new
chr4	24520191	24520290	chr4:24520191-24520290	3	-	24520191	24520191	5263520	1	99,	0,
#Partially deleted in new
chr4	24527474	24584550	chr4:24527474-24584550	3	-	24527923	24584393	0	14	567,170,191,123,192,109,150,87,168,219,160,194,436,228,	0,2126,5389,9576,12633,13365,14398,15465,21380,27250,28776,43179,48768,56848,
#Partially deleted in new
chr4	24527474	24539150	chr4:24527474-24539150	0	-	24527474	24527474	8553170	4	567,170,191,2100,	0,2126,5389,9576,
#Partially deleted in new
chr4	24527476	24534199	chr4:24527476-24534199	0	-	24527476	24527476	8553170	3	565,170,1336,	0,2124,5387,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	24527476	24530883	chr4:24527476-24530883	0	-	24527476	24527476	8553170	2	565,1283,	0,2124,
#Partially deleted in new
chr4	24527713	24532950	chr4:24527713-24532950	0	-	24527713	24527713	8553170	2	328,87,	0,5150,
#Partially deleted in new
chr4	24527759	24530079	chr4:24527759-24530079	0	-	24527759	24527759	8553170	2	282,479,	0,1841,
#Partially deleted in new
chr4	24539708	24541899	chr4:24539708-24541899	0	-	24539708	24539708	8553170	3	591,109,27,	0,1131,2164,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	24563192	24563461	chr4:24563192-24563461	3	-	24563192	24563192	8553170	1	269,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	24576468	24584282	chr4:24576468-24584282	0	-	24576468	24576468	8553170	3	210,223,99,	0,4251,7715,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	24576549	24584537	chr4:24576549-24584537	0	-	24576549	24576549	8553170	3	129,223,215,	0,4170,7773,
#Deleted in new
chr4	24658071	24658375	chr4:24658071-24658375	7	-	24658071	24658071	16724991	1	304,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	24659855	24671568	chr4:24659855-24671568	3	+	24659855	24659855	8553170	2	188,2007,	0,9706,
#Deleted in new
chr4	24768048	24768331	chr4:24768048-24768331	7	+	24768048	24768048	16724991	1	283,	0,
#Deleted in new
chr4	24771466	24772420	chr4:24771466-24772420	7	+	24771466	24771466	16724991	1	954,	0,
#Partially deleted in new
chr4	24789911	24799683	chr4:24789911-24799683	0	+	24799521	24799683	789624	3	57,41,178,	0,150,9594,
#Deleted in new
chr4	24789946	24790606	chr4:24789946-24790606	0	+	24789946	24789946	8553170	2	22,545,	0,115,
#Partially deleted in new
chr4	24795462	24800842	chr4:24795462-24800842	3	+	24799521	24800244	0	2	189,1337,	0,4043,
#Partially deleted in new
chr4	24806116	24912886	chr4:24806116-24912886	1	-	24808388	24912879	789624	12	2703,117,77,145,85,73,173,117,108,39,162,70,	0,13742,16380,25389,28831,30319,31111,32039,46955,67564,70419,106700,
#Partially deleted in new
chr4	24807664	24912894	chr4:24807664-24912894	1	-	24808388	24912879	789624	13	1155,117,33,77,145,85,73,173,117,108,39,162,78,	0,12194,13390,14832,23841,27283,28771,29563,30491,45407,66016,68871,105152,
#Partially deleted in new
chr4	24807995	24980148	chr4:24807995-24980148	3	-	24808388	24895054	789624	13	824,117,77,145,85,73,173,117,108,39,162,127,80,	0,11863,14501,23510,26952,28440,29232,30160,45076,65685,68540,86996,172073,
#Partially deleted in new
chr4	24808187	24912954	chr4:24808187-24912954	1	-	24808765	24912879	789624	5	632,108,39,162,138,	0,44884,65493,68348,104629,
#Partially deleted in new
chr4	24808671	24820197	chr4:24808671-24820197	0	-	24808671	24808671	8553170	2	148,339,	0,11187,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	24821056	24823045	chr4:24821056-24823045	0	-	24821056	24821056	8553170	2	31,549,	0,1440,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	24826939	24980204	chr4:24826939-24980204	0	-	24826939	24826939	8553170	9	4711,85,73,173,117,108,39,162,136,	0,8008,9496,10288,11216,26132,46741,49596,153129,
#Partially deleted in new
chr4	24836435	24853268	chr4:24836435-24853268	0	-	24836435	24836435	8553170	4	73,173,117,197,	0,792,1720,16636,
#Partially deleted in new
chr4	24998846	25030879	chr4:24998846-25030879	3	-	25003450	25030693	789624	8	5422,165,170,72,72,72,72,383,	0,13488,19142,20320,25973,28021,29660,31650,
#Partially deleted in new
chr4	24999766	25030665	chr4:24999766-25030665	0	-	24999766	25030665	789624	7	140,170,72,72,72,72,169,	0,18222,19400,25053,27101,28740,30730,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	25120013	25160442	chr4:25120013-25160442	3	-	25123930	25160369	0	11	4212,91,94,92,130,103,154,159,119,155,187,	0,5680,7250,24760,24990,31946,34984,36023,36842,38939,40242,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	25122254	25160394	chr4:25122254-25160394	0	-	25159019	25160369	789624	12	1971,91,94,92,130,103,154,159,119,155,137,139,	0,3439,5009,22519,22749,29705,32743,33782,34601,36698,37373,38001,
#Partially deleted in new
chr4	25123849	25160431	chr4:25123849-25160431	0	-	25156944	25160369	0	10	376,91,94,92,130,103,154,159,119,176,	0,1844,3414,20924,21154,28110,31148,32187,33006,36406,
#Partially deleted in new
chr4	25124080	25156098	chr4:25124080-25156098	0	-	25144795	25156098	789624	5	145,91,92,154,62,	0,1613,20693,30917,31956,
#Partially deleted in new
chr4	25125300	25127308	chr4:25125300-25127308	0	-	25125300	25125300	8553170	2	484,45,	0,1963,
#Partially deleted in new
chr4	25127263	25155231	chr4:25127263-25155231	0	-	25127263	25127263	8553170	3	94,92,234,	0,17510,27734,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	25160640	25161687	chr4:25160640-25161687	0	+	25160640	25160640	8553170	2	113,270,	0,777,
#Partially deleted in new
chr4	25160662	25277306	chr4:25160662-25277306	3	+	25252340	25277187	789624	10	91,155,201,132,154,68,100,134,60,293,	0,91658,94402,95880,98374,99861,103087,107780,108481,116351,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	25160671	25201440	chr4:25160671-25201440	3	+	25160671	25160671	8553170	2	82,3973,	0,36796,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	25220402	25220913	chr4:25220402-25220913	3	+	25220402	25220402	8553170	1	511,	0,
#Partially deleted in new
chr4	25233974	25279092	chr4:25233974-25279092	3	+	25234163	25277187	0	10	457,155,201,132,154,68,100,134,60,2079,	0,18346,21090,22568,25062,26549,29775,34468,35169,43039,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	25250544	25250639	chr4:25250544-25250639	3	+	25250544	25250544	8553170	1	95,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	25312784	25352541	chr4:25312784-25352541	0	+	25312784	25312784	8553170	9	152,119,83,276,81,73,151,101,468,	0,1261,2533,20398,21123,32763,36707,38804,39289,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	25312785	25370383	chr4:25312785-25370383	3	+	25312809	25369164	789624	13	151,119,83,276,81,73,151,101,122,76,52,145,1355,	0,1260,2532,20397,21122,32762,36706,38803,49073,49440,51668,52236,56243,
#Partially deleted in new
chr4	25312794	25366115	chr4:25312794-25366115	0	+	25312809	25361862	789624	9	142,119,83,276,81,122,76,52,1094,	0,1251,2523,20388,21113,49064,49431,51659,52227,
#Partially deleted in new
chr4	25312817	25349685	chr4:25312817-25349685	1	+	25312881	25333316	789624	11	119,119,76,107,9,6,6,148,81,73,194,	0,1228,2500,20361,20469,20479,20486,20493,21090,32730,36674,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	25333260	25370026	chr4:25333260-25370026	0	+	25333260	25369030	789624	10	198,81,73,151,101,122,76,52,51,998,	0,647,12287,16231,18328,28598,28965,31193,31761,35768,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	25361708	25365148	chr4:25361708-25365148	0	+	25361708	25361708	8553170	4	272,76,52,127,	0,517,2745,3313,
#Partially deleted in new
chr4	25377212	25418498	chr4:25377212-25418498	3	+	25377427	25418382	0	29	132,139,106,133,75,27,45,85,105,84,87,65,43,77,101,52,56,47,57,57,94,98,62,39,102,75,174,124,344,	0,205,3161,6048,11287,11504,11625,12923,13698,15125,16592,17097,17458,17616,19451,19635,25758,28360,29616,29984,32485,36432,37111,37253,37386,38253,39212,40403,40942,
#Partially deleted in new
chr4	25377292	25418489	chr4:25377292-25418489	1	+	25377427	25418382	0	29	52,139,106,133,75,27,45,85,105,84,87,65,43,77,101,52,56,50,57,57,94,98,62,39,102,75,174,124,335,	0,125,3081,5968,11207,11424,11545,12843,13618,15045,16512,17017,17378,17536,19371,19555,25678,28280,29536,29904,32405,36352,37031,37173,37306,38173,39132,40323,40862,
#Partially deleted in new
chr4	25377314	25390183	chr4:25377314-25390183	0	+	25377427	25383311	789624	8	30,139,72,133,75,27,45,48,	0,103,3059,5946,11185,11402,11523,12821,
#Partially deleted in new
chr4	25377319	25388854	chr4:25377319-25388854	0	+	25377427	25388854	789624	6	237,106,133,75,27,17,	0,3054,5941,11180,11397,11518,
#Partially deleted in new
chr4	25377356	25380608	chr4:25377356-25380608	0	+	25377356	25377356	8553170	2	200,235,	0,3017,
#Partially deleted in new
chr4	25393860	25395420	chr4:25393860-25395420	0	+	25393860	25393860	8553170	4	31,65,43,592,	0,449,810,968,
#Partially deleted in new
chr4	25394757	25409769	chr4:25394757-25409769	0	+	25394757	25394757	8553170	8	148,101,52,56,47,57,57,72,	0,1906,2090,8213,10815,12071,12439,14940,
#Partially deleted in new
chr4	25396718	25413871	chr4:25396718-25413871	0	+	25396718	25396718	8553170	8	46,52,56,47,57,57,94,227,	0,129,6252,8854,10110,10478,12979,16926,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	25405600	25418498	chr4:25405600-25418498	0	+	25405600	25405600	8553170	8	19,57,57,94,860,102,2274,344,	0,1228,1596,4097,8044,8998,9865,12554,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	25412917	25418261	chr4:25412917-25418261	0	+	25412917	25412917	8553170	7	1468,39,102,75,174,124,107,	0,1548,1681,2548,3507,4698,5237,
#Partially deleted in new
chr4	25415151	25418497	chr4:25415151-25418497	0	+	25415151	25415151	8553170	2	1447,882,	0,2464,
#Partially deleted in new
chr4	25472516	25473815	chr4:25472516-25473815	7	+	25472516	25472516	16724991	3	160,25,393,	0,754,906,
#Deleted in new
chr4	25504996	25506675	chr4:25504996-25506675	7	+	25504996	25504996	16724991	1	1679,	0,
#Deleted in new
chr4	25598563	25598625	chr4:25598563-25598625	3	-	25598563	25598563	8553170	1	62,	0,
#Partially deleted in new
chr4	25608710	25619468	chr4:25608710-25619468	3	+	25608710	25608710	8553170	2	191,220,	0,10538,
#Partially deleted in new
chr4	25622776	25623601	chr4:25622776-25623601	7	+	25622776	25622776	16724991	2	167,336,	0,489,
#Partially deleted in new
chr4	25648010	25676769	chr4:25648010-25676769	1	+	25662500	25676749	789624	13	346,115,135,129,144,112,196,96,121,168,117,125,635,	0,14487,14697,16191,18117,19869,21636,22727,23590,25076,26285,26494,28124,
#Partially deleted in new
chr4	25655300	25666240	chr4:25655300-25666240	0	+	25662500	25666240	789624	5	57,115,135,129,113,	0,7197,7407,8901,10827,
#Partially deleted in new
chr4	25655821	25676769	chr4:25655821-25676769	1	+	25662500	25676749	789624	13	69,115,135,129,144,112,196,96,121,168,117,125,635,	0,6676,6886,8380,10306,12058,13825,14916,15779,17265,18474,18683,20313,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	25655843	25678748	chr4:25655843-25678748	3	+	25662500	25676749	789624	13	47,115,138,129,144,112,196,96,121,168,117,125,2614,	0,6654,6861,8358,10284,12036,13803,14894,15757,17243,18452,18661,20291,
#Partially deleted in new
chr4	25656463	25676749	chr4:25656463-25676749	1	+	25662500	25676749	789624	13	101,115,135,129,144,112,196,96,121,168,117,125,615,	0,6034,6244,7738,9664,11416,13183,14274,15137,16623,17832,18041,19671,
#Partially deleted in new
chr4	25656468	25666231	chr4:25656468-25666231	0	+	25662500	25666231	789624	5	96,115,138,129,104,	0,6029,6236,7733,9659,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	25664893	25669693	chr4:25664893-25669693	0	+	25664893	25664893	8553170	5	221,144,176,112,47,	0,1234,2032,2986,4753,
#Deleted in new
chr4	25678849	25679020	chr4:25678849-25679020	7	+	25678849	25678849	16724991	1	171,	0,
#Partially deleted in new
chr4	25686201	25686458	chr4:25686201-25686458	7	-	25686201	25686201	16724991	1	257,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	25718081	25719745	chr4:25718081-25719745	7	-	25718081	25718081	16724991	2	815,531,	0,1133,
#Deleted in new
chr4	25719754	25720030	chr4:25719754-25720030	7	-	25719754	25719754	16724991	1	276,	0,
#Deleted in new
chr4	25720098	25720431	chr4:25720098-25720431	7	-	25720098	25720098	16724991	1	333,	0,
#Deleted in new
chr4	25720515	25721056	chr4:25720515-25721056	7	-	25720515	25720515	16724991	1	541,	0,
#Partially deleted in new
chr4	25747426	25862959	chr4:25747426-25862959	3	-	25748424	25862836	789624	24	1138,73,103,128,110,85,91,84,128,177,63,141,120,180,212,141,133,133,59,116,122,127,571,285,	0,10107,10261,11514,17899,20098,20313,28850,31649,34815,36801,40797,43028,54856,57114,70711,72381,74569,82671,85568,86021,87770,99867,115248,
#Partially deleted in new
chr4	25747432	25863595	chr4:25747432-25863595	1	-	25748424	25863512	789624	24	1132,73,103,128,110,85,91,84,128,177,63,141,120,180,212,141,133,133,59,116,122,127,571,140,	0,10101,10255,11508,17893,20092,20307,28844,31643,34809,36795,40791,43022,54850,57108,70705,72375,74563,82665,85562,86015,87764,99861,116023,
#Partially deleted in new
chr4	25747433	25759977	chr4:25747433-25759977	0	-	25747433	25747433	8553170	4	1131,73,103,1037,	0,10100,10254,11507,
#Partially deleted in new
chr4	25748063	25757852	chr4:25748063-25757852	0	-	25748063	25748063	8553170	3	501,73,165,	0,9470,9624,
#Partially deleted in new
chr4	25748265	25863537	chr4:25748265-25863537	1	-	25748424	25847567	789624	24	299,73,103,128,110,85,91,84,128,177,63,141,120,180,212,141,133,133,59,116,122,127,571,104,	0,9268,9422,10675,17060,19259,19474,28011,30810,33976,35962,39958,42189,54017,56275,69872,71542,73730,81832,84729,85182,86931,99028,115168,
#Partially deleted in new
chr4	25755921	25765360	chr4:25755921-25765360	0	-	25756855	25765360	789624	5	987,73,103,128,35,	0,1612,1766,3019,9404,
#Partially deleted in new
chr4	25757533	25767772	chr4:25757533-25767772	0	-	25757569	25767772	789624	5	73,128,110,85,33,	0,1407,7792,9991,10206,
#Partially deleted in new
chr4	25767583	25776719	chr4:25767583-25776719	0	-	25767583	25767583	8553170	3	26,91,443,	0,156,8693,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	25770265	25773577	chr4:25770265-25773577	3	+	25770265	25770265	8553170	2	237,246,	0,3066,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	25777615	25779203	chr4:25777615-25779203	0	-	25777785	25779203	789624	2	276,128,	0,1460,
#Partially deleted in new
chr4	25833062	25862988	chr4:25833062-25862988	0	-	25833062	25833062	8553170	4	48,122,127,314,	0,385,2134,29612,
#Partially deleted in new
chr4	25847342	25860631	chr4:25847342-25860631	0	-	25847342	25847567	789624	2	522,31,	0,13258,
#Partially deleted in new
chr4	25847381	25863742	chr4:25847381-25863742	0	-	25847381	25847567	789624	2	483,122,	0,16239,
#Partially deleted in new
chr4	25847460	25863760	chr4:25847460-25863760	0	-	25847460	25847567	789624	2	404,154,	0,16146,
#Partially deleted in new
chr4	25861829	25929545	chr4:25861829-25929545	0	+	25861829	25861829	8553170	3	324,57,392,	0,66483,67324,
#Partially deleted in new
chr4	25864880	25869550	chr4:25864880-25869550	3	-	25864880	25864880	8553170	2	526,236,	0,4434,
#Partially deleted in new
chr4	25913905	25929874	chr4:25913905-25929874	1	+	25913905	25929191	789624	4	183,229,57,721,	0,288,14407,15248,
#Partially deleted in new
chr4	25914203	25929812	chr4:25914203-25929812	3	+	25914313	25929191	789624	3	219,57,659,	0,14109,14950,
#Partially deleted in new
chr4	25914308	25929813	chr4:25914308-25929813	1	+	25914313	25929191	789624	2	114,660,	0,14845,
#Deleted in new
chr4	25928214	25929425	chr4:25928214-25929425	0	+	25928214	25928214	8553170	2	155,272,	0,939,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	26070753	26104258	chr4:26070753-26104258	3	+	26070753	26070753	8553170	3	1267,141,214,	0,9696,33291,
#Partially deleted in new
chr4	26111864	26113839	chr4:26111864-26113839	7	+	26111864	26111864	16724991	2	864,783,	0,1192,
#Partially deleted in new
chr4	26163454	26415605	chr4:26163454-26415605	0	+	26362611	26415605	789624	5	160,183,39,96,131,	0,198991,222898,242720,252020,
#Partially deleted in new
chr4	26272606	26424426	chr4:26272606-26424426	0	+	26272633	26424426	789624	6	155,39,96,166,175,85,	0,113746,133568,142868,147944,151735,
#Partially deleted in new
chr4	26319661	26415613	chr4:26319661-26415613	0	+	26362611	26415613	789624	5	109,183,39,96,139,	0,42784,66691,86513,95813,
#Partially deleted in new
chr4	26319685	26420725	chr4:26319685-26420725	0	+	26320756	26420725	789624	6	203,116,39,96,166,175,	0,1014,66667,86489,95789,100865,
#Partially deleted in new
chr4	26319709	26435128	chr4:26319709-26435128	1	+	26320756	26431007	0	12	179,116,39,96,166,175,138,113,141,156,104,4437,	0,990,66643,86465,95765,100841,104632,104921,109010,110188,110709,110982,
#Partially deleted in new
chr4	26319709	26431066	chr4:26319709-26431066	1	+	26319874	26431007	0	11	179,39,96,166,175,138,113,141,156,104,375,	0,66643,86465,95765,100841,104632,104921,109010,110188,110709,110982,
#Partially deleted in new
chr4	26320562	26431007	chr4:26320562-26431007	1	+	26320756	26431007	0	11	253,39,96,166,175,138,113,141,156,104,316,	0,65790,85612,94912,99988,103779,104068,108157,109335,109856,110129,
#Partially deleted in new
chr4	26320724	26430457	chr4:26320724-26430457	0	+	26320724	26320724	8553170	9	91,39,96,166,175,138,113,141,560,	0,65628,85450,94750,99826,103617,103906,107995,109173,
#Partially deleted in new
chr4	26320786	26406263	chr4:26320786-26406263	0	+	26362611	26406263	789624	4	29,183,39,89,	0,41659,65566,85388,
#Partially deleted in new
chr4	26320799	26431066	chr4:26320799-26431066	1	+	26321028	26431007	0	11	249,39,96,166,175,138,113,141,156,104,375,	0,65553,85375,94675,99751,103542,103831,107920,109098,109619,109892,
#Partially deleted in new
chr4	26320806	26435128	chr4:26320806-26435128	3	+	26362611	26431007	0	12	242,183,39,96,166,175,138,113,141,156,104,4437,	0,41639,65546,85368,94668,99744,103535,103824,107913,109091,109612,109885,
#Partially deleted in new
chr4	26320806	26406265	chr4:26320806-26406265	0	+	26362611	26406265	789624	4	242,183,39,91,	0,41639,65546,85368,
#Partially deleted in new
chr4	26321006	26415583	chr4:26321006-26415583	0	+	26321028	26410048	789624	5	42,39,96,251,109,	0,65346,85168,89035,94468,
#Partially deleted in new
chr4	26321013	26415640	chr4:26321013-26415640	0	+	26321013	26321013	8553170	6	35,183,39,96,58,166,	0,41432,65339,85161,91916,94461,
#Partially deleted in new
chr4	26321019	26415640	chr4:26321019-26415640	0	+	26321019	26321019	8553170	5	29,39,96,58,166,	0,65333,85155,91910,94455,
#Partially deleted in new
chr4	26321364	26406203	chr4:26321364-26406203	0	+	26362611	26406203	789624	4	507,183,39,29,	0,41081,64988,84810,
#Partially deleted in new
chr4	26321601	26431183	chr4:26321601-26431183	1	+	26406181	26431007	0	11	69,39,96,166,175,138,113,141,156,104,492,	0,64751,84573,93873,98949,102740,103029,107118,108296,108817,109090,
#Partially deleted in new
chr4	26322163	26420571	chr4:26322163-26420571	0	+	26362611	26420571	789624	6	64,183,39,96,166,21,	0,40282,64189,84011,93311,98387,
#Partially deleted in new
chr4	26322208	26424383	chr4:26322208-26424383	0	+	26406181	26424383	789624	6	89,39,96,166,175,42,	0,64144,83966,93266,98342,102133,
#Partially deleted in new
chr4	26322869	26420563	chr4:26322869-26420563	0	+	26362611	26420563	789624	6	81,183,39,96,166,13,	0,39576,63483,83305,92605,97681,
#Partially deleted in new
chr4	26343139	26424479	chr4:26343139-26424479	0	+	26406181	26424479	789624	6	84,39,96,166,175,138,	0,43213,63035,72335,77411,81202,
#Partially deleted in new
chr4	26359690	26420553	chr4:26359690-26420553	0	+	26362611	26420553	789624	6	85,183,39,96,166,3,	0,2755,26662,46484,55784,60860,
#Partially deleted in new
chr4	26362435	26435131	chr4:26362435-26435131	1	+	26362611	26431007	0	11	193,39,96,166,175,138,113,141,156,104,4440,	0,23917,43739,53039,58115,61906,62195,66284,67462,67983,68256,
#Partially deleted in new
chr4	26362435	26431156	chr4:26362435-26431156	1	+	26362611	26430799	789624	10	193,39,96,166,175,138,113,141,156,465,	0,23917,43739,53039,58115,61906,62195,66284,67462,68256,
#Partially deleted in new
chr4	26362445	26368145	chr4:26362445-26368145	0	+	26362445	26362445	8553170	2	183,272,	0,5428,
#Partially deleted in new
chr4	26362475	26420838	chr4:26362475-26420838	0	+	26362475	26362475	8553170	5	153,39,96,166,288,	0,23877,43699,52999,58075,
#Partially deleted in new
chr4	26420569	26424994	chr4:26420569-26424994	0	+	26420569	26420569	8553170	3	156,138,364,	0,3772,4061,
#Partially deleted in new
chr4	26428612	26430195	chr4:26428612-26430195	0	+	26428612	26428612	8553170	2	248,298,	0,1285,
#Partially deleted in new
chr4	26428719	26430851	chr4:26428719-26430851	0	+	26428719	26430851	789624	3	141,104,160,	0,1699,1972,
#Deleted in new
chr4	26430145	26431174	chr4:26430145-26431174	0	+	26430145	26430145	8553170	2	377,483,	0,546,
#Partially deleted in new
chr4	26481399	26490462	chr4:26481399-26490462	3	-	26481637	26490267	0	5	771,128,262,252,307,	0,1756,4237,7833,8756,
#Partially deleted in new
chr4	26576436	26620667	chr4:26576436-26620667	0	+	26576799	26620667	789624	4	393,73,46,55,	0,36732,37971,44176,
#Partially deleted in new
chr4	26576681	26688348	chr4:26576681-26688348	0	+	26576791	26688348	789624	13	116,73,46,76,75,64,47,111,73,39,113,75,4,	0,36487,37726,43931,60529,62089,63459,82915,89651,95467,97094,106993,111663,
#Partially deleted in new
chr4	26576695	26666405	chr4:26576695-26666405	0	+	26576695	26576695	8553170	9	124,73,46,76,75,64,47,111,73,	0,36473,37712,43917,60515,62075,63445,82901,89637,
#Partially deleted in new
chr4	26583915	26755351	chr4:26583915-26755351	3	+	26584193	26754947	789624	21	377,73,46,76,75,64,47,111,73,39,113,75,63,85,45,33,110,92,116,71,479,	0,29253,30492,36697,53295,54855,56225,75681,82417,88233,89860,99759,104429,134017,136165,151539,155948,158592,164495,169904,170957,
#Partially deleted in new
chr4	26584083	26754227	chr4:26584083-26754227	0	+	26584083	26584083	8553170	20	209,73,46,76,75,64,47,111,73,39,113,75,63,85,45,33,110,92,116,408,	0,29085,30324,36529,53127,54687,56057,75513,82249,88065,89692,99591,104261,133849,135997,151371,155780,158424,164327,169736,
#Partially deleted in new
chr4	26584088	26683722	chr4:26584088-26683722	0	+	26584193	26683722	789624	9	204,75,64,47,111,73,39,113,48,	0,53122,54682,56052,75508,82244,88060,89687,99586,
#Partially deleted in new
chr4	26584193	26754947	chr4:26584193-26754947	1	+	26584193	26754947	789624	18	99,75,64,47,111,73,39,113,75,63,85,45,33,110,92,116,71,75,	0,53017,54577,55947,75403,82139,87955,89582,99481,104151,133739,135887,151261,155670,158314,164217,169626,170679,
#Partially deleted in new
chr4	26584281	26663073	chr4:26584281-26663073	0	+	26584281	26584281	8553170	9	11,73,46,76,75,64,47,111,210,	0,28887,30126,36331,52929,54489,55859,75315,78582,
#Deleted in new
chr4	26702308	26702388	chr4:26702308-26702388	3	+	26702308	26702308	8553170	1	80,	0,
#Partially deleted in new
chr4	26857677	27002228	chr4:26857677-27002228	0	+	26919511	27002228	789624	7	91,149,131,115,112,116,12,	0,521,61826,99934,137701,141554,144539,
#Partially deleted in new
chr4	26857927	27002394	chr4:26857927-27002394	0	+	26919511	27002394	789624	6	420,131,115,112,116,178,	0,61576,99684,137451,141304,144289,
#Deleted in new
chr4	26858247	26858919	chr4:26858247-26858919	0	+	26858247	26858247	8553170	2	100,307,	0,365,
#Deleted in new
chr4	26859805	26860599	chr4:26859805-26860599	3	-	26859805	26859805	789624	2	223,259,	0,535,
#Deleted in new
chr4	26859805	26860581	chr4:26859805-26860581	0	-	26859805	26859805	789624	2	223,72,	0,704,
#Deleted in new
chr4	26859808	26860244	chr4:26859808-26860244	0	-	26859808	26859808	789624	2	220,107,	0,329,
#Partially deleted in new
chr4	26860690	27025381	chr4:26860690-27025381	1	+	26861218	27022996	789624	12	679,131,115,112,116,178,178,168,101,239,274,2863,	0,58813,96921,134688,138541,141526,142236,146842,147737,148073,157020,161828,
#Partially deleted in new
chr4	26860793	27024187	chr4:26860793-27024187	3	+	26861218	27021037	789624	13	576,131,115,112,116,178,178,168,101,239,274,68,1669,	0,58710,96818,134585,138438,141423,142133,146739,147634,147970,156917,160207,161725,
#Partially deleted in new
chr4	26860840	27023966	chr4:26860840-27023966	1	+	26861218	27022996	789624	13	529,131,115,112,116,178,178,168,24,101,239,274,1448,	0,58663,96771,134538,138391,141376,142086,146692,147142,147587,147923,156870,161678,
#Partially deleted in new
chr4	26861218	27022996	chr4:26861218-27022996	1	+	26861218	27022996	789624	13	151,131,115,112,116,178,178,168,24,101,239,274,478,	0,58285,96393,134160,138013,140998,141708,146314,146764,147209,147545,156492,161300,
#Partially deleted in new
chr4	26861218	27022996	chr4:26861218-27022996	1	+	26861218	27022996	0	12	151,131,115,112,116,178,178,168,101,239,274,478,	0,58285,96393,134160,138013,140998,141708,146314,147209,147545,156492,161300,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	26861458	26995402	chr4:26861458-26995402	0	+	26919511	26995402	789624	5	216,97,131,115,24,	0,20054,58045,96153,133920,
#Deleted in new
chr4	26873560	26874349	chr4:26873560-26874349	7	-	26873560	26873560	16724991	2	65,678,	0,111,
#Partially deleted in new
chr4	27002999	27022840	chr4:27002999-27022840	0	+	27002999	27022556	789624	7	105,168,101,239,274,119,322,	0,4533,5428,5764,14711,18494,19519,
#Partially deleted in new
chr4	27008472	27019600	chr4:27008472-27019600	0	+	27008472	27019496	789624	4	56,239,274,201,	0,291,9238,10927,
#Deleted in new
chr4	27021281	27022661	chr4:27021281-27022661	0	+	27021281	27021281	8553170	2	331,143,	0,1237,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	27133995	27140051	chr4:27133995-27140051	3	-	27133995	27133995	8553170	3	235,162,85,	0,4289,5971,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	27207504	27218404	chr4:27207504-27218404	3	-	27207504	27207504	8553170	2	2246,263,	0,10637,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	27217478	27282225	chr4:27217478-27282225	3	+	27217478	27217478	789624	6	85,117,158,429,57,1956,	0,9902,13885,59386,60694,62791,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	27223318	27223427	chr4:27223318-27223427	3	-	27223318	27223318	8553170	1	109,	0,
#Partially deleted in new
chr4	27262505	27267254	chr4:27262505-27267254	3	-	27262505	27262505	8553170	2	618,31,	0,4718,
#Deleted in new
chr4	27585144	27586144	chr4:27585144-27586144	7	+	27585144	27585144	16724991	1	1000,	0,
#Partially deleted in new
chr4	27967722	27985063	chr4:27967722-27985063	3	-	27967722	27967722	8553170	2	205,395,	0,16946,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	28362278	28402701	chr4:28362278-28402701	3	-	28362278	28362278	8553170	5	314,110,147,105,50,	0,8421,30925,31917,40373,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	28381496	28402864	chr4:28381496-28402864	1	-	28381496	28381496	8553170	4	415,147,105,213,	0,11707,12699,21155,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	28435448	28600275	chr4:28435448-28600275	3	+	28435448	28435448	8553170	4	342,60,81,229,	0,41001,142467,164598,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	28711197	28711476	chr4:28711197-28711476	3	+	28711197	28711197	8553170	1	279,	0,
#Deleted in new
chr4	28819581	28819668	chr4:28819581-28819668	3	+	28819581	28819581	5263520	1	87,	0,
#Deleted in new
chr4	28823243	28824211	chr4:28823243-28824211	7	-	28823243	28823243	16724991	1	968,	0,
#Partially deleted in new
chr4	28996523	29014594	chr4:28996523-29014594	3	+	28996523	28996523	8553170	3	348,74,265,	0,12150,17806,
#Deleted in new
chr4	29010618	29011021	chr4:29010618-29011021	7	-	29010618	29010618	16724991	1	403,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	29046590	29048765	chr4:29046590-29048765	3	+	29046590	29046590	8553170	2	96,1508,	0,667,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	29118307	29202770	chr4:29118307-29202770	3	+	29118307	29118307	8553170	3	337,131,290,	0,424,84173,
#Partially deleted in new
chr4	29214397	29221162	chr4:29214397-29221162	3	+	29214397	29214397	8553170	3	57,199,319,	0,890,6446,
#Deleted in new
chr4	29407099	29408012	chr4:29407099-29408012	7	+	29407099	29407099	16724991	1	913,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	29465700	29467850	chr4:29465700-29467850	7	-	29465700	29465700	16724991	2	867,948,	0,1202,
#Deleted in new
chr4	29510634	29510737	chr4:29510634-29510737	3	+	29510634	29510634	8553170	1	103,	0,
#Partially deleted in new
chr4	29748756	29750100	chr4:29748756-29750100	7	+	29748756	29748756	16724991	1	1344,	0,
#Deleted in new
chr4	29907658	29907791	chr4:29907658-29907791	7	-	29907658	29907658	16724991	1	133,	0,
#Partially deleted in new
chr4	29962643	29963758	chr4:29962643-29963758	7	-	29962643	29962643	16724991	2	68,709,	0,406,
#Deleted in new
chr4	30006950	30008316	chr4:30006950-30008316	7	-	30006950	30006950	16724991	2	100,892,	0,474,
#Partially deleted in new
chr4	30720414	30732973	chr4:30720414-30732973	3	+	30721422	30730788	0	2	4182,2221,	0,10338,
#Deleted in new
chr4	30720852	30725309	chr4:30720852-30725309	1	+	30721422	30724641	0	1	4457,	0,
#Partially deleted in new
chr4	30722353	31146805	chr4:30722353-31146805	0	+	30722353	31142849	789624	3	2243,193,4333,	0,197799,420119,
#Deleted in new
chr4	30723049	30724596	chr4:30723049-30724596	0	+	30723049	30723049	8553170	2	184,156,	0,1391,
#Partially deleted in new
chr4	30723479	31143125	chr4:30723479-31143125	0	+	30723479	31142849	789624	4	1117,66,193,653,	0,145542,196673,418993,
#Partially deleted in new
chr4	30724526	31142954	chr4:30724526-31142954	0	+	30724526	30950208	789624	4	70,217,96,482,	0,195626,225593,417946,
#Partially deleted in new
chr4	30776256	30793970	chr4:30776256-30793970	3	-	30776256	30776256	8553170	3	51,81,48,	0,6843,17666,
#Deleted in new
chr4	30884442	30885182	chr4:30884442-30885182	7	-	30884442	30884442	16724991	1	740,	0,
#Partially deleted in new
chr4	30920152	30987807	chr4:30920152-30987807	0	+	30920152	30920152	8553170	3	217,96,230,	0,29967,67425,
#Partially deleted in new
chr4	30925712	30950215	chr4:30925712-30950215	0	+	30925712	30925712	8553170	2	191,96,	0,24407,
#Partially deleted in new
chr4	31171143	31211675	chr4:31171143-31211675	3	+	31171143	31171143	789624	5	156,86,32,108,125,	0,5477,23305,25210,40407,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	31350283	31351725	chr4:31350283-31351725	3	+	31350283	31350283	8553170	2	68,534,	0,908,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	31997396	32155406	chr4:31997396-32155406	3	+	31997396	31997396	789624	3	426,215,93,	0,148656,157917,
#Partially deleted in new
chr4	32351037	32353220	chr4:32351037-32353220	3	+	32351037	32351037	789624	2	106,743,	0,1440,
#Partially deleted in new
chr4	33010947	33011746	chr4:33010947-33011746	7	-	33010947	33010947	16724991	1	799,	0,
#Partially deleted in new
chr4	33238238	33238670	chr4:33238238-33238670	7	-	33238238	33238238	16724991	1	432,	0,
#Deleted in new
chr4	33400537	33400679	chr4:33400537-33400679	7	+	33400537	33400537	16724991	1	142,	0,
#Partially deleted in new
chr4	33433509	33437877	chr4:33433509-33437877	3	+	33433509	33433509	8553170	2	55,277,	0,4091,
#Partially deleted in new
chr4	33850590	33892149	chr4:33850590-33892149	1	+	33850590	33850590	8553170	4	333,70,124,14,	0,33719,38359,41545,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	33881614	33979936	chr4:33881614-33979936	0	+	33881614	33881614	8553170	3	140,124,197,	0,7335,98125,
#Partially deleted in new
chr4	33881697	33979807	chr4:33881697-33979807	3	+	33881697	33881697	8553170	4	57,124,329,68,	0,7252,92513,98042,
#Partially deleted in new
chr4	33888967	33974513	chr4:33888967-33974513	0	+	33888967	33888967	8553170	2	106,303,	0,85243,
#Deleted in new
chr4	33968173	33968526	chr4:33968173-33968526	7	+	33968173	33968173	16724991	1	353,	0,
#Partially deleted in new
chr4	34120893	34259127	chr4:34120893-34259127	1	-	34120893	34120893	8553170	4	248,195,62,41,	0,367,4907,138193,
#Partially deleted in new
chr4	34123505	34269747	chr4:34123505-34269747	3	-	34123505	34123505	789624	4	219,62,140,125,	0,2295,135581,146117,
#Partially deleted in new
chr4	34657605	34669396	chr4:34657605-34669396	0	+	34657605	34657605	8553170	2	80,199,	0,11592,
#Deleted in new
chr4	34668765	34669432	chr4:34668765-34669432	1	+	34668765	34668765	8553170	2	64,235,	0,432,
#Deleted in new
chr4	34714269	34714598	chr4:34714269-34714598	7	+	34714269	34714269	16724991	1	329,	0,
#Deleted in new
chr4	35487811	35489750	chr4:35487811-35489750	7	+	35487811	35487811	16724991	1	1939,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	35495897	35496003	chr4:35495897-35496003	3	+	35495897	35495897	8553170	1	106,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	35948220	36073835	chr4:35948220-36073835	0	-	35948220	35948220	8553170	13	228,134,138,144,269,247,59,143,98,140,48,174,147,	0,19602,37009,58682,64342,67165,67679,70923,97758,98489,103785,109749,125468,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	36005364	36046034	chr4:36005364-36046034	0	-	36005364	36005364	8553170	3	1682,269,56,	0,7198,40614,
#Partially deleted in new
chr4	36045975	36047285	chr4:36045975-36047285	0	-	36045975	36045975	8553170	2	101,576,	0,734,
#Deleted in new
chr4	36065059	36065726	chr4:36065059-36065726	7	-	36065059	36065059	16724991	1	667,	0,
#Partially deleted in new
chr4	36065997	36244509	chr4:36065997-36244509	3	-	36067906	36229486	0	33	2281,135,64,36,83,140,129,118,75,69,148,106,213,164,64,199,103,145,135,175,183,86,200,116,179,121,70,354,92,77,59,1064,331,	0,7691,14218,16253,17370,25883,41567,48172,51063,53652,55181,58864,62535,67228,81298,81550,82407,84902,92732,93333,94461,95467,98916,100934,111829,121453,127580,144392,146398,147245,148424,162584,178181,
#Partially deleted in new
chr4	36068205	36161500	chr4:36068205-36161500	1	-	36068205	36161500	789624	23	73,11,123,64,36,83,140,129,118,75,69,148,106,213,164,64,199,103,145,135,175,183,36,	0,5483,5495,12010,14045,15162,23675,39359,45964,48855,51444,52973,56656,60327,65020,79090,79342,80199,82694,90524,91125,92253,93259,
#Partially deleted in new
chr4	36148440	36159741	chr4:36148440-36159741	0	-	36148440	36148440	8553170	4	67,145,135,411,	0,2459,10289,10890,
#Deleted in new
chr4	36157403	36158795	chr4:36157403-36158795	0	-	36157403	36157403	8553170	2	147,66,	0,1326,
#Partially deleted in new
chr4	36160111	36243862	chr4:36160111-36243862	0	-	36160111	36160111	8553170	13	530,86,200,116,179,121,70,354,92,77,59,1064,172,	0,1353,4802,6820,17715,27339,33466,50278,52284,53131,54310,68470,83579,
#Deleted in new
chr4	36209374	36210745	chr4:36209374-36210745	0	-	36209374	36210501	789624	2	40,356,	0,1015,
#Partially deleted in new
chr4	36229345	36243939	chr4:36229345-36243939	0	-	36229345	36229486	789624	2	300,331,	0,14263,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	36256517	36273940	chr4:36256517-36273940	0	+	36256517	36256517	789624	3	144,193,706,	0,3319,16717,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	36281621	36344785	chr4:36281621-36344785	1	+	36282012	36343824	789624	9	408,331,180,245,162,290,245,58,1284,	0,8751,11904,13173,24569,26582,34620,57490,61880,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	36281621	36344785	chr4:36281621-36344785	1	+	36281758	36343824	789624	10	408,616,331,180,245,162,290,245,58,1284,	0,2354,8751,11904,13173,24569,26582,34620,57490,61880,
#Partially deleted in new
chr4	36283861	36343866	chr4:36283861-36343866	1	+	36283959	36343824	789624	9	730,331,180,245,162,290,245,58,365,	0,6511,9664,10933,22329,24342,32380,55250,59640,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	36284021	36344785	chr4:36284021-36344785	3	+	36284079	36343824	789624	9	570,331,180,245,162,290,245,58,1284,	0,6351,9504,10773,22169,24182,32220,55090,59480,
#Partially deleted in new
chr4	36311189	36392410	chr4:36311189-36392410	3	-	36311189	36311189	8553170	3	124,87,330,	0,503,80891,
#Partially deleted in new
chr4	36315583	36316486	chr4:36315583-36316486	0	+	36315583	36315583	8553170	2	208,245,	0,658,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	36332740	36345756	chr4:36332740-36345756	0	+	36332740	36332740	8553170	3	39,467,2255,	0,750,10761,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	36496536	36641900	chr4:36496536-36641900	3	-	36496536	36496536	789624	5	516,62,74,73,51,	0,1890,86120,118917,145313,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	36496692	36641900	chr4:36496692-36641900	1	-	36496692	36496692	8553170	6	360,62,74,132,109,51,	0,1734,85964,87972,118725,145157,
#Deleted in new
chr4	36506042	36508869	chr4:36506042-36508869	7	+	36506042	36506042	16724991	1	2827,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	36548883	36582730	chr4:36548883-36582730	1	-	36548883	36548883	8553170	2	682,74,	0,33773,
#Partially deleted in new
chr4	37018254	37018956	chr4:37018254-37018956	0	+	37018254	37018254	8553170	1	702,	0,
#Partially deleted in new
chr4	37078576	37125424	chr4:37078576-37125424	3	+	37078576	37078576	8553170	3	56,77,405,	0,30703,46443,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	37078581	37111043	chr4:37078581-37111043	1	+	37078581	37078581	8553170	3	51,77,302,	0,30698,32160,
#Partially deleted in new
chr4	37241909	37241991	chr4:37241909-37241991	3	-	37241909	37241909	5263520	1	82,	0,
#Partially deleted in new
chr4	37244219	37449465	chr4:37244219-37449465	3	+	37245067	37447217	789624	7	999,89,117,204,145,590,6181,	0,81716,112146,186352,189656,194581,199065,
#Partially deleted in new
chr4	37453940	37591826	chr4:37453940-37591826	3	+	37588867	37591000	789624	4	100,50,54,1739,	0,104086,134905,136147,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	37453987	37623495	chr4:37453987-37623495	1	+	37588867	37622909	789624	4	53,50,54,671,	0,104039,134858,168837,
#Partially deleted in new
chr4	37584232	37591826	chr4:37584232-37591826	1	+	37588867	37591000	789624	3	156,54,1739,	0,4613,5855,
#Deleted in new
chr4	37588086	37588875	chr4:37588086-37588875	3	-	37588086	37588086	8553170	2	483,51,	0,738,
#Partially deleted in new
chr4	37590799	37686376	chr4:37590799-37686376	3	-	37631387	37686287	789624	7	418,139,237,58,72,225,177,	0,40585,44087,47647,56568,58476,95400,
#Partially deleted in new
chr4	37612900	37686376	chr4:37612900-37686376	1	-	37631387	37686287	789624	7	442,139,237,58,72,225,177,	0,18484,21986,25546,34467,36375,73299,
#Partially deleted in new
chr4	37634886	37665381	chr4:37634886-37665381	0	-	37634886	37665353	789624	5	237,58,72,225,179,	0,3560,12481,14389,30316,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	37699894	37700002	chr4:37699894-37700002	3	-	37699894	37699894	8553170	1	108,	0,
#Deleted in new
chr4	37821360	37821838	chr4:37821360-37821838	7	+	37821360	37821360	16724991	1	478,	0,
#Partially deleted in new
chr4	37826632	37862937	chr4:37826632-37862937	3	+	37826732	37861612	789624	14	181,168,107,85,84,194,190,98,181,94,130,190,134,1428,	0,3331,7985,10896,13215,13433,17731,19000,20298,20569,21889,23551,28975,34877,
#Partially deleted in new
chr4	37826659	37839663	chr4:37826659-37839663	1	+	37826732	37839663	789624	5	154,168,107,85,147,	0,3304,7958,10869,12857,
#Partially deleted in new
chr4	37826707	37847336	chr4:37826707-37847336	0	+	37826732	37839663	789624	9	106,168,107,85,167,84,194,98,406,	0,3256,7910,10821,12809,13140,13358,18925,20223,
#Partially deleted in new
chr4	37826718	37847478	chr4:37826718-37847478	0	+	37826732	37839663	789624	11	95,168,107,85,167,84,194,190,98,181,277,	0,3245,7899,10810,12798,13129,13347,17645,18914,20212,20483,
#Partially deleted in new
chr4	37826720	37862013	chr4:37826720-37862013	0	+	37826732	37839869	789624	12	93,168,74,194,190,98,181,94,130,190,134,504,	0,3243,13137,13345,17643,18912,20210,20481,21801,23463,28887,34789,
#Partially deleted in new
chr4	37847039	37861720	chr4:37847039-37861720	0	+	37847039	37855621	789624	4	72,94,134,211,	0,162,8568,14470,
#Deleted in new
chr4	37866560	37867091	chr4:37866560-37867091	3	-	37866560	37866560	8553170	1	531,	0,
#Partially deleted in new
chr4	37868291	37869978	chr4:37868291-37869978	7	+	37868291	37868291	16724991	2	784,274,	0,1413,
#Partially deleted in new
chr4	37891086	38139173	chr4:37891086-38139173	3	+	37902095	38137335	0	20	262,510,465,90,105,133,92,111,129,87,281,140,186,162,159,245,160,170,174,2039,	0,10916,123422,127267,129504,130499,136701,144501,153275,154730,158531,163112,198845,204842,211912,224623,226946,233875,241997,246048,
#Partially deleted in new
chr4	37891086	38137619	chr4:37891086-38137619	1	+	37902095	38137335	0	21	262,510,465,90,105,133,92,111,129,87,281,162,120,140,186,162,159,245,21,174,485,	0,10916,123422,127267,129504,130499,136701,144501,153275,154730,158531,160812,162019,163112,198845,204842,211912,224623,234024,241997,246048,
#Partially deleted in new
chr4	37891098	37952812	chr4:37891098-37952812	1	+	37902095	37952023	789624	3	250,510,807,	0,10904,60907,
#Partially deleted in new
chr4	37901997	38137743	chr4:37901997-38137743	1	+	38090089	38137335	789624	10	410,108,186,162,159,245,160,170,174,609,	0,152233,187934,193931,201001,213712,216035,222964,231086,235137,
#Deleted in new
chr4	37960434	37961125	chr4:37960434-37961125	3	+	37960434	37961010	789624	1	691,	0,
#Partially deleted in new
chr4	37977309	38090065	chr4:37977309-38090065	0	+	37977499	38090065	789624	12	220,465,90,105,133,92,111,129,87,281,140,134,	0,37199,41044,43281,44276,50478,58278,67052,68507,72308,76889,112622,
#Deleted in new
chr4	37995493	37996203	chr4:37995493-37996203	7	-	37995493	37995493	16724991	1	710,	0,
#Deleted in new
chr4	38006783	38007105	chr4:38006783-38007105	7	-	38006783	38006783	16724991	1	322,	0,
#Partially deleted in new
chr4	38014882	38020864	chr4:38014882-38020864	0	+	38014882	38014882	8553170	3	91,90,274,	0,3471,5708,
#Partially deleted in new
chr4	38020676	38137743	chr4:38020676-38137743	0	+	38020676	38137335	789624	17	19,133,92,111,129,87,281,120,140,186,162,159,245,160,170,174,609,	0,909,7111,14911,23685,25140,28941,32429,33522,69255,75252,82322,95033,97356,104285,112407,116458,
#Partially deleted in new
chr4	38027787	38054244	chr4:38027787-38054244	0	+	38027787	38054244	789624	4	92,111,281,46,	0,7800,21830,26411,
#Partially deleted in new
chr4	38030390	38049804	chr4:38030390-38049804	0	+	38030390	38030390	8553170	5	66,111,129,87,187,	0,5197,13971,15426,19227,
#Partially deleted in new
chr4	38044473	38089999	chr4:38044473-38089999	0	+	38044473	38089999	789624	6	17,87,281,162,140,68,	0,1343,5144,7425,9725,45458,
#Partially deleted in new
chr4	38045870	38090117	chr4:38045870-38090117	0	+	38045870	38090117	789624	5	33,281,140,39,186,	0,3747,8328,14749,44061,
#Partially deleted in new
chr4	38103047	38118453	chr4:38103047-38118453	0	+	38103047	38103047	8553170	4	110,245,160,57,	0,12662,14985,15349,
#Partially deleted in new
chr4	38110180	38137544	chr4:38110180-38137544	0	+	38110180	38110180	8553170	6	554,245,160,170,174,410,	0,5529,7852,14781,22903,26954,
#Partially deleted in new
chr4	38111901	38139175	chr4:38111901-38139175	0	+	38111901	38111901	8553170	6	200,245,160,170,174,2041,	0,3808,6131,13060,21182,25233,
#Deleted in new
chr4	38115899	38118585	chr4:38115899-38118585	0	+	38115899	38115899	8553170	2	55,553,	0,2133,
#Partially deleted in new
chr4	38119953	38137627	chr4:38119953-38137627	0	+	38119953	38119953	8553170	4	155,170,174,493,	0,5008,13130,17181,
#Partially deleted in new
chr4	38132706	38137402	chr4:38132706-38137402	0	+	38132706	38132706	8553170	3	124,174,268,	0,377,4428,
#Partially deleted in new
chr4	38132759	38137249	chr4:38132759-38137249	0	+	38132759	38132759	8553170	2	498,115,	0,4375,
#Deleted in new
chr4	38286993	38287491	chr4:38286993-38287491	3	+	38286993	38286993	8553170	2	36,331,	0,167,
#Partially deleted in new
chr4	38366913	38385759	chr4:38366913-38385759	3	+	38366913	38366913	789624	2	117,383,	0,18463,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	38390753	38391675	chr4:38390753-38391675	3	+	38390753	38390753	8553170	1	922,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	38420661	38523180	chr4:38420661-38523180	3	-	38420661	38420661	789624	8	651,121,97,65,242,699,106,78,	0,10542,29282,30513,31911,32561,73331,102441,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	38509766	38518056	chr4:38509766-38518056	3	+	38509766	38509766	789624	3	181,89,487,	0,7327,7803,
#Partially deleted in new
chr4	38564002	38570671	chr4:38564002-38570671	3	+	38564002	38564002	8553170	3	114,166,220,	0,5084,6449,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	38612700	38664628	chr4:38612700-38664628	1	-	38612700	38612700	789624	8	559,84,862,161,64,82,103,453,	0,1924,11721,12901,15338,17799,23255,51475,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	38619689	38624575	chr4:38619689-38624575	3	-	38619689	38619689	8553170	2	473,154,	0,4732,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	38626407	38664809	chr4:38626407-38664809	0	-	38626407	38626407	8553170	4	1695,82,103,16,	0,4092,9548,38386,
#Partially deleted in new
chr4	38664195	38701042	chr4:38664195-38701042	3	+	38680625	38697263	789624	6	266,96,487,151,161,3961,	0,16391,24389,25533,30550,32886,
#Partially deleted in new
chr4	38664196	38690751	chr4:38664196-38690751	1	+	38680625	38689883	789624	4	265,96,487,1023,	0,16390,24388,25532,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	38664343	38680985	chr4:38664343-38680985	0	+	38664343	38664343	8553170	2	118,399,	0,16243,
#Deleted in new
chr4	38758790	38758892	chr4:38758790-38758892	7	-	38758790	38758790	16724991	1	102,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	38772238	38782958	chr4:38772238-38782958	1	-	38773154	38775590	0	4	3414,189,317,38,	0,3536,3871,10682,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	38772238	38782990	chr4:38772238-38782990	1	-	38773154	38775590	0	2	3414,70,	0,10682,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	38772238	38782990	chr4:38772238-38782990	1	-	38773154	38775590	0	3	3414,317,70,	0,3871,10682,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	38772238	38782990	chr4:38772238-38782990	3	-	38773154	38775590	0	3	3414,189,70,	0,3536,10682,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	38772612	38776196	chr4:38772612-38776196	1	-	38773154	38775590	0	2	3040,422,	0,3162,
#Deleted in new
chr4	38773124	38776197	chr4:38773124-38776197	1	-	38773154	38775590	0	2	2528,88,	0,2985,
#Partially deleted in new
chr4	38775265	38782989	chr4:38775265-38782989	0	-	38775265	38775548	789624	3	290,317,69,	0,844,7655,
#Partially deleted in new
chr4	38775835	38782990	chr4:38775835-38782990	0	-	38775835	38775835	8553170	4	128,317,81,70,	0,274,3135,7085,
#Partially deleted in new
chr4	38790676	38794633	chr4:38790676-38794633	0	-	38790676	38790676	8553170	2	555,97,	0,3860,
#Partially deleted in new
chr4	38790847	38804819	chr4:38790847-38804819	0	-	38790847	38790847	8553170	4	384,92,77,66,	0,10009,13458,13906,
#Partially deleted in new
chr4	38796256	38804791	chr4:38796256-38804791	3	-	38796470	38798831	0	4	2642,92,77,38,	0,4600,8049,8497,
#Partially deleted in new
chr4	38796282	38804376	chr4:38796282-38804376	1	-	38796470	38798831	0	3	2616,92,71,	0,4574,8023,
#Partially deleted in new
chr4	38798348	38804851	chr4:38798348-38804851	0	-	38798348	38798831	789624	2	550,98,	0,6405,
#Partially deleted in new
chr4	38798560	38804916	chr4:38798560-38804916	0	-	38798560	38798831	789624	3	338,77,163,	0,5745,6193,
#Partially deleted in new
chr4	38798685	38856817	chr4:38798685-38856817	0	-	38798685	38798831	789624	6	213,92,77,34,82,57,	0,2171,5620,6068,6426,58075,
#Partially deleted in new
chr4	38798760	38805578	chr4:38798760-38805578	0	-	38798760	38798831	789624	2	138,467,	0,6351,
#Partially deleted in new
chr4	38800471	38804789	chr4:38800471-38804789	0	-	38800471	38800471	8553170	3	477,77,36,	0,3834,4282,
#Partially deleted in new
chr4	38800869	38805533	chr4:38800869-38805533	0	-	38800869	38800869	8553170	3	79,77,422,	0,3436,4242,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	38823714	38856817	chr4:38823714-38856817	3	-	38827082	38829473	0	2	5823,57,	0,33046,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	38826601	38829539	chr4:38826601-38829539	1	-	38827082	38829473	0	1	2938,	0,
#Deleted in new
chr4	38827082	38829473	chr4:38827082-38829473	1	-	38827082	38829473	0	2	297,1146,	0,1245,
#Partially deleted in new
chr4	38829022	38856817	chr4:38829022-38856817	0	-	38829022	38829473	789624	2	515,57,	0,27738,
#Partially deleted in new
chr4	38829199	38856817	chr4:38829199-38856817	0	-	38829199	38829473	789624	3	338,153,57,	0,14439,27561,
#Partially deleted in new
chr4	38867676	38891795	chr4:38867676-38891795	0	+	38878078	38891795	789624	3	158,356,53,	0,10394,24066,
#Partially deleted in new
chr4	38867750	38943560	chr4:38867750-38943560	1	+	38905825	38943557	789624	13	84,88,114,107,135,153,124,92,162,140,73,54,105,	0,23992,37771,38004,40841,47170,55019,61491,63700,64484,67967,73217,75705,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	38867815	38945739	chr4:38867815-38945739	3	+	38878078	38943557	789624	15	19,149,356,88,114,107,135,153,124,92,162,140,73,54,2284,	0,582,10255,23927,37706,37939,40776,47105,54954,61426,63635,64419,67902,73152,75640,
#Deleted in new
chr4	38868031	38868127	chr4:38868031-38868127	3	+	38868031	38868031	789624	1	96,	0,
#Partially deleted in new
chr4	38914618	38929283	chr4:38914618-38929283	0	+	38914618	38914618	8553170	3	455,124,42,	0,8151,14623,
#Partially deleted in new
chr4	38929098	38944033	chr4:38929098-38944033	0	+	38929098	38929098	8553170	6	235,162,140,73,54,578,	0,2352,3136,6619,11869,14357,
#Partially deleted in new
chr4	38935731	38938704	chr4:38935731-38938704	0	+	38935731	38935731	8553170	2	59,237,	0,2736,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	38966743	39032421	chr4:38966743-39032421	3	-	38971069	39032313	789624	7	898,106,84,120,261,270,196,	0,4288,19592,22107,26994,31896,65482,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	38993734	39032922	chr4:38993734-39032922	0	-	38993734	39032313	789624	4	264,186,218,281,	0,4989,38491,38907,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	39028374	39032720	chr4:39028374-39032720	0	-	39028374	39028374	8553170	3	223,218,79,	0,3851,4267,
#Partially deleted in new
chr4	39045038	39122209	chr4:39045038-39122209	3	+	39062652	39121066	789624	12	58,477,183,137,197,213,187,225,163,213,172,1200,	0,17520,30926,36064,36924,41476,51653,58248,62530,67981,70120,75971,
#Partially deleted in new
chr4	39045059	39122208	chr4:39045059-39122208	1	+	39076004	39121066	789624	11	37,183,137,197,213,187,225,163,213,172,1199,	0,30905,36043,36903,41455,51632,58227,62509,67960,70099,75950,
#Partially deleted in new
chr4	39062231	39121205	chr4:39062231-39121205	1	+	39062514	39121066	789624	11	804,183,137,197,213,187,225,163,213,172,196,	0,13733,18871,19731,24283,34460,41055,45337,50788,52927,58778,
#Partially deleted in new
chr4	39062439	39122206	chr4:39062439-39122206	1	+	39062514	39121066	789624	10	596,137,197,213,187,225,163,213,172,1197,	0,18663,19523,24075,34252,40847,45129,50580,52719,58570,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	39062439	39116332	chr4:39062439-39116332	1	+	39062514	39115393	789624	10	596,183,137,197,213,187,225,163,213,1174,	0,13525,18663,19523,24075,34252,40847,45129,50580,52719,
#Partially deleted in new
chr4	39062939	39081182	chr4:39062939-39081182	0	+	39062939	39063584	789624	4	96,226,183,80,	0,632,13025,18163,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	39103314	39126857	chr4:39103314-39126857	0	+	39103314	39126795	789624	5	197,163,213,172,164,	0,4254,9705,11844,23379,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	39112676	39126818	chr4:39112676-39126818	3	-	39112676	39112676	8553170	4	577,124,134,111,	0,2842,7475,14031,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	39133912	39135608	chr4:39133912-39135608	3	+	39133912	39133912	8553170	2	133,322,	0,1374,
#Partially deleted in new
chr4	39182403	39285810	chr4:39182403-39285810	3	+	39182557	39278650	789624	37	160,92,66,126,116,116,81,113,174,71,173,115,107,123,150,148,205,160,111,110,58,141,83,84,147,125,113,69,78,97,125,82,151,124,77,125,324,	0,3322,4135,7252,12140,17074,21238,22750,23159,32197,33437,33692,34730,35579,42480,45806,46082,49393,49758,52362,57873,61844,62066,62965,70742,71502,73444,75082,83659,85591,87572,90576,92404,94616,95727,96135,103083,
#Partially deleted in new
chr4	39182503	39215919	chr4:39182503-39215919	0	+	39182557	39203651	789624	9	60,92,66,126,81,113,174,71,79,	0,3222,4035,7152,21138,22650,23059,32097,33337,
#Partially deleted in new
chr4	39182523	39234831	chr4:39182523-39234831	0	+	39182523	39182523	8553170	5	40,133,160,111,66,	0,46034,49273,49638,52242,
#Partially deleted in new
chr4	39182528	39205572	chr4:39182528-39205572	0	+	39182557	39199490	789624	7	35,92,126,116,81,113,10,	0,3197,7127,16949,21113,22625,23034,
#Partially deleted in new
chr4	39182528	39285780	chr4:39182528-39285780	0	+	39182557	39199490	789624	36	35,92,66,126,116,81,113,174,71,173,115,107,123,150,148,205,160,111,110,58,141,83,84,147,125,113,69,78,97,125,82,151,124,77,125,294,	0,3197,4010,7127,16949,21113,22625,23034,32072,33312,33567,34605,35454,42355,45681,45957,49268,49633,52237,57748,61719,61941,62840,70617,71377,73319,74957,83534,85466,87447,90451,92279,94491,95602,96010,102958,
#Partially deleted in new
chr4	39182528	39203722	chr4:39182528-39203722	0	+	39189668	39203722	789624	6	35,66,126,116,116,81,	0,4010,7127,12015,16949,21113,
#Partially deleted in new
chr4	39182528	39203727	chr4:39182528-39203727	0	+	39199551	39203727	789624	5	35,66,126,116,86,	0,4010,7127,16949,21113,
#Partially deleted in new
chr4	39182530	39194781	chr4:39182530-39194781	0	+	39182530	39182530	8553170	5	33,92,66,126,238,	0,3195,4008,7125,12013,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr4	39182547	39219133	chr4:39182547-39219133	1	+	39182557	39218076	789624	14	16,92,66,126,116,116,81,113,174,71,173,115,107,1147,	0,3178,3991,7108,11996,16930,21094,22606,23015,32053,33293,33548,34586,35439,
#Partially deleted in new
chr4	39199477	39206115	chr4:39199477-39206115	0	+	39199477	39199477	8553170	4	116,81,113,553,	0,4164,5676,6085,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr4	39215881	39275339	chr4:39215881-39275339	0	+	39215881	39215881	8553170	23	132,115,107,123,150,148,205,160,111,110,58,141,83,84,147,125,113,69,78,97,125,82,532,	0,214,1252,2101,9002,12328,12604,15915,16280,18884,24395,28366,28588,29487,37264,38024,39966,41604,50181,52113,54094,57098,58926,
#Partially deleted in new
chr4	39228530	39240334	chr4:39228530-39240334	0	+	39228530	39234769	789624	5	160,160,83,110,58,	0,3266,3659,6235,11746,
#Partially deleted in new
chr4	39228554	39234875	chr4:39228554-39234875	0	+	39228554	39228554	8553170	4	136,160,147,110,	0,3242,3607,6211,
#Partially deleted in new
chr4	39234766	39237994	chr4:39234766-39237994	0	+	39234766	39234766	8553170	2	109,315,	0,2913,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	39270052	39285809	chr4:39270052-39285809	0	+	39270052	39270052	8553170	6	48,1979,124,77,125,323,	0,2927,6967,8078,8486,15434,
#Partially deleted in new
chr4	39276961	39285810	chr4:39276961-39285810	0	+	39276961	39276961	8553170	4	182,77,125,324,	0,1169,1577,8525,
#Partially deleted in new
chr4	39276963	39285808	chr4:39276963-39285808	0	+	39276963	39276963	8553170	4	195,77,125,322,	0,1167,1575,8523,
#Partially deleted in new
chr4	39278270	39285636	chr4:39278270-39285636	0	+	39278270	39278270	8553170	2	393,150,	0,7216,
#Partially deleted in new
chr4	39287455	39366351	chr4:39287455-39366351	3	-	39288760	39366241	0	25	1389,192,214,146,118,155,99,96,138,92,115,110,397,105,180,108,287,88,78,78,233,123,76,129,113,	0,2392,4183,8158,12565,12804,14822,15044,15281,15604,17358,19136,21180,23989,25296,29459,32927,33831,35884,39107,40068,54889,57945,63892,78783,
#Partially deleted in new
chr4	39287455	39366375	chr4:39287455-39366375	1	-	39288760	39366241	0	25	1389,192,214,146,118,155,99,96,138,92,115,113,397,105,180,108,287,88,78,78,233,123,76,129,137,	0,2392,4183,8158,12565,12804,14822,15044,15281,15604,17358,19136,21180,23989,25296,29459,32927,33831,35884,39107,40068,54889,57945,63892,78783,
#Partially deleted in new
chr4	39288696	39295899	chr4:39288696-39295899	0	-	39288696	39288696	8553170	5	148,192,214,146,23,	0,1151,2942,6917,7180,
#Partially deleted in new
chr4	39288778	39292074	chr4:39288778-39292074	0	-	39288778	39288778	8553170	4	66,192,214,95,	0,1069,2860,3201,
#Partially deleted in new
chr4	39288814	39292135	chr4:39288814-39292135	0	-	39288814	39288814	8553170	4	30,192,214,59,	0,1033,2824,3262,
#Partially deleted in new
chr4	39289555	39291738	chr4:39289555-39291738	0	-	39289835	39291738	789624	2	484,100,	0,2083,
#Partially deleted in new
chr4	39300315	39303193	chr4:39300315-39303193	0	-	39300315	39300315	8553170	5	99,99,96,138,134,	0,1962,2184,2421,2744,
#Partially deleted in new
chr4	39303089	39317013	chr4:39303089-39317013	0	-	39303089	39317013	789624	5	62,115,105,180,99,	0,1724,8355,9662,13825,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	39306633	39312772	chr4:39306633-39312772	0	-	39306633	39306633	8553170	5	71,96,397,105,21,	0,742,2002,4811,6118,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	39312763	39318070	chr4:39312763-39318070	0	-	39312763	39312763	8553170	3	168,108,207,	0,4151,5100,
#Partially deleted in new
chr4	39316909	39327757	chr4:39316909-39327757	1	-	39316909	39327757	789624	7	66,45,278,88,78,78,234,	0,68,3473,4377,6430,9653,10614,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	39316982	39322404	chr4:39316982-39322404	0	-	39316982	39316982	8553170	4	40,287,88,122,	0,3400,4304,5300,
#Deleted in new
chr4	39320459	39321828	chr4:39320459-39321828	0	-	39320459	39320459	8553170	2	210,542,	0,827,
#Partially deleted in new
chr4	39323202	39366335	chr4:39323202-39366335	0	-	39323202	39323202	8553170	6	215,233,123,76,129,97,	0,4321,19142,22198,28145,43036,
#Partially deleted in new
chr4	39327523	39366339	chr4:39327523-39366339	0	-	39341603	39366241	789624	6	233,179,123,76,129,101,	0,13963,14821,17877,23824,38715,
#Partially deleted in new
chr4	39327607	39366349	chr4:39327607-39366349	0	-	39327607	39366241	789624	5	149,123,76,45,111,	0,14737,17793,23824,38631,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	39399148	39399248	chr4:39399148-39399248	3	+	39399148	39399148	8553170	1	100,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	39406852	39451536	chr4:39406852-39451536	3	+	39406949	39448686	0	5	922,511,269,1144,3236,	0,27357,30874,39479,41448,
#Partially deleted in new
chr4	39411909	39411974	chr4:39411909-39411974	3	+	39411909	39411909	5263520	1	65,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	39441664	39441764	chr4:39441664-39441764	3	+	39441664	39441664	8553170	1	100,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	39452520	39458949	chr4:39452520-39458949	3	-	39454542	39458439	0	8	1705,117,81,133,96,116,47,59,	0,2012,2343,3885,5065,5673,5873,6370,
#Partially deleted in new
chr4	39454123	39458948	chr4:39454123-39458948	1	-	39454542	39458439	0	8	102,117,81,133,96,116,47,58,	0,409,740,2282,3462,4070,4270,4767,
#Partially deleted in new
chr4	39454131	39458894	chr4:39454131-39458894	1	-	39454542	39458439	789624	7	94,117,81,133,96,247,4,	0,401,732,2274,3454,4062,4759,
#Partially deleted in new
chr4	39454136	39458888	chr4:39454136-39458888	1	-	39454542	39458439	0	7	89,117,81,133,96,116,495,	0,396,727,2269,3449,4057,4257,
#Partially deleted in new
chr4	39454136	39458920	chr4:39454136-39458920	1	-	39454542	39457606	789624	7	89,117,81,133,96,116,30,	0,396,727,2269,3449,4057,4754,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	39454136	39455276	chr4:39454136-39455276	0	-	39454136	39454136	8553170	3	89,117,413,	0,396,727,
#Partially deleted in new
chr4	39454138	39457681	chr4:39454138-39457681	0	-	39454542	39457681	789624	4	87,117,81,85,	0,394,725,3458,
#Partially deleted in new
chr4	39454170	39457125	chr4:39454170-39457125	0	-	39454170	39454170	8553170	4	55,117,81,720,	0,362,693,2235,
#Partially deleted in new
chr4	39454561	39458915	chr4:39454561-39458915	0	-	39454561	39458439	789624	7	88,66,133,96,116,47,25,	0,302,1844,3024,3632,3832,4329,
#Partially deleted in new
chr4	39454623	39458923	chr4:39454623-39458923	0	-	39454623	39458439	789624	7	26,81,133,96,116,205,33,	0,240,1782,2962,3570,3770,4267,
#Partially deleted in new
chr4	39455810	39458931	chr4:39455810-39458931	0	-	39455810	39455810	8553170	5	728,96,116,47,41,	0,1775,2383,2583,3080,
#Partially deleted in new
chr4	39456327	39458915	chr4:39456327-39458915	0	-	39456327	39456327	8553170	4	211,96,247,25,	0,1258,1866,2563,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	39457354	39458901	chr4:39457354-39458901	0	-	39457354	39457354	8553170	3	327,116,508,	0,839,1039,
#Deleted in new
chr4	39457375	39458897	chr4:39457375-39458897	0	-	39457375	39457375	8553170	4	306,116,48,7,	0,818,1018,1515,
#Deleted in new
chr4	39457804	39458922	chr4:39457804-39458922	0	-	39457804	39457804	8553170	3	505,47,32,	0,589,1086,
#Deleted in new
chr4	39457923	39458915	chr4:39457923-39458915	0	-	39457923	39457923	8553170	2	517,25,	0,967,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	39458586	39479506	chr4:39458586-39479506	3	+	39459117	39477115	789624	11	576,173,94,81,157,58,129,146,71,112,2444,	0,2203,3609,4938,6459,6698,8931,11432,12649,14513,18476,
#Partially deleted in new
chr4	39459003	39462289	chr4:39459003-39462289	0	+	39459117	39460845	789624	3	238,173,94,	0,1786,3192,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	39459030	39477414	chr4:39459030-39477414	0	+	39459117	39465049	789624	9	132,173,81,157,58,910,146,71,352,	0,1759,4494,6015,6254,8487,10988,12205,18032,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	39459044	39464238	chr4:39459044-39464238	1	+	39459117	39463609	789624	3	118,173,714,	0,1745,4480,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	39459044	39477390	chr4:39459044-39477390	0	+	39459117	39468167	789624	12	118,173,94,81,157,58,129,309,146,71,112,328,	0,1745,3151,4480,6001,6240,8473,9074,10974,12191,14055,18018,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	39459057	39464163	chr4:39459057-39464163	1	+	39459117	39463641	789624	4	105,173,94,639,	0,1732,3138,4467,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	39459057	39477414	chr4:39459057-39477414	0	+	39459057	39459057	8553170	11	105,173,94,81,157,58,910,146,71,112,352,	0,1732,3138,4467,5988,6227,8460,10961,12178,14042,18005,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	39459062	39477648	chr4:39459062-39477648	1	+	39459117	39477115	789624	10	100,173,94,81,157,58,146,71,112,586,	0,1727,3133,4462,5983,6222,10956,12173,14037,18000,
#Partially deleted in new
chr4	39459065	39477160	chr4:39459065-39477160	1	+	39459117	39477115	789624	7	97,173,129,146,71,112,98,	0,1724,8452,10953,12170,14034,17997,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	39459086	39477532	chr4:39459086-39477532	1	+	39459117	39477115	789624	8	76,173,81,129,146,71,112,470,	0,1703,4438,8431,10932,12149,14013,17976,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	39459092	39477336	chr4:39459092-39477336	0	+	39459117	39467553	789624	9	70,173,94,81,129,146,71,894,2457,	0,1697,3103,4432,8425,10926,12143,14007,15787,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	39459101	39467324	chr4:39459101-39467324	0	+	39459117	39465049	789624	5	61,173,157,58,1308,	0,1688,5944,6183,6915,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	39459108	39477584	chr4:39459108-39477584	1	+	39459117	39477077	789624	10	54,173,94,81,157,58,129,146,71,522,	0,1681,3087,4416,5937,6176,8409,10910,12127,17954,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	39459108	39477584	chr4:39459108-39477584	1	+	39459117	39477115	789624	7	54,173,81,146,71,112,522,	0,1681,4416,10910,12127,13991,17954,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	39459113	39477075	chr4:39459113-39477075	0	+	39459117	39477075	789624	10	49,173,94,81,101,129,146,71,112,13,	0,1676,3082,4411,6903,8404,10905,12122,13986,17949,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	39459119	39466072	chr4:39459119-39466072	0	+	39459119	39459119	8553170	7	43,173,94,81,157,58,56,	0,1670,3076,4405,5926,6165,6897,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	39460872	39477536	chr4:39460872-39477536	0	+	39460872	39465049	789624	8	90,157,58,129,146,71,112,474,	0,4173,4412,6645,9146,10363,12227,16190,
#Partially deleted in new
chr4	39460873	39473106	chr4:39460873-39473106	0	+	39460873	39465335	789624	8	89,94,81,58,129,146,71,7,	0,1322,2651,4411,6644,9145,10362,12226,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	39462217	39485109	chr4:39462217-39485109	0	+	39462217	39484504	789624	8	72,81,157,58,146,71,112,706,	0,1307,2828,3067,7801,9018,10882,22186,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	39468873	39477618	chr4:39468873-39477618	0	+	39468873	39468873	8553170	4	1291,71,112,556,	0,2362,4226,8189,
#Partially deleted in new
chr4	39469228	39473653	chr4:39469228-39473653	0	+	39469228	39469228	8553170	3	936,71,554,	0,2007,3871,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	39470547	39479300	chr4:39470547-39479300	0	+	39470547	39470547	8553170	4	77,71,112,2238,	0,688,2552,6515,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	39480254	39481905	chr4:39480254-39481905	7	+	39480254	39480254	16724991	2	412,1120,	0,531,
#Deleted in new
chr4	39480356	39481765	chr4:39480356-39481765	4	+	39480356	39480356	16724991	1	1409,	0,
#Deleted in new
chr4	39480484	39481466	chr4:39480484-39481466	5	+	39480484	39480484	16724991	1	982,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	39498754	39527618	chr4:39498754-39527618	3	-	39500142	39521512	0	12	1499,111,92,134,131,95,148,198,201,102,169,336,	0,5120,5662,6482,6863,9811,11005,11598,11906,15328,22596,28528,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	39498762	39527437	chr4:39498762-39527437	1	-	39500142	39521512	0	11	1491,111,92,134,131,95,148,198,102,169,155,	0,5112,5654,6474,6855,9803,10997,11590,15320,22588,28520,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	39498787	39526557	chr4:39498787-39526557	1	-	39500142	39521512	0	12	1466,111,92,134,131,95,148,198,201,102,169,174,	0,5087,5629,6449,6830,9778,10972,11565,11873,15295,22563,27596,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	39499910	39527439	chr4:39499910-39527439	1	-	39500142	39510834	0	11	343,111,92,134,131,95,148,198,201,102,157,	0,3964,4506,5326,5707,8655,9849,10442,10750,14172,27372,
#Partially deleted in new
chr4	39510510	39527564	chr4:39510510-39527564	0	-	39510510	39527084	789624	6	40,201,102,169,67,282,	0,150,3572,10840,16542,16772,
#Partially deleted in new
chr4	39510666	39527900	chr4:39510666-39527900	0	-	39510666	39521512	789624	4	195,102,169,102,	0,3416,10684,17132,
#Partially deleted in new
chr4	39510696	39527915	chr4:39510696-39527915	0	-	39514174	39521512	789624	4	165,98,169,117,	0,3386,10654,17102,
#Partially deleted in new
chr4	39510708	39527437	chr4:39510708-39527437	0	-	39514174	39521512	789624	4	153,98,169,155,	0,3374,10642,16574,
#Partially deleted in new
chr4	39510735	39527437	chr4:39510735-39527437	0	-	39510735	39521512	789624	4	126,102,194,155,	0,3347,10615,16547,
#Partially deleted in new
chr4	39510814	39528233	chr4:39510814-39528233	0	-	39510814	39510814	8553170	3	47,102,435,	0,3268,16984,
#Partially deleted in new
chr4	39514092	39528311	chr4:39514092-39528311	0	-	39514092	39521512	789624	3	92,169,172,	0,7258,14047,
#Partially deleted in new
chr4	39521351	39527598	chr4:39521351-39527598	0	-	39521351	39521512	789624	2	168,366,	0,5881,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	39546329	39639090	chr4:39546329-39639090	3	-	39552125	39605145	789624	5	5829,143,49,110,352,	0,10098,26085,58741,92409,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	39547835	39549812	chr4:39547835-39549812	0	-	39547835	39547835	8553170	2	300,308,	0,1669,
#Partially deleted in new
chr4	39551609	39583958	chr4:39551609-39583958	0	-	39551609	39551609	8553170	3	549,49,24,	0,20805,32325,
#Partially deleted in new
chr4	39551642	39638893	chr4:39551642-39638893	1	-	39552117	39605145	789624	4	516,49,110,155,	0,20772,53428,87096,
#Partially deleted in new
chr4	39551784	39638230	chr4:39551784-39638230	0	-	39551784	39551784	8553170	4	374,143,49,68,	0,4643,20630,86378,
#Partially deleted in new
chr4	39551838	39638845	chr4:39551838-39638845	0	-	39556528	39605145	789624	4	320,143,110,107,	0,4589,53232,86900,
#Partially deleted in new
chr4	39556426	39638902	chr4:39556426-39638902	0	-	39556426	39605145	789624	5	144,49,110,145,164,	0,15988,48644,55539,82312,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	39621011	39621073	chr4:39621011-39621073	3	+	39621011	39621011	8553170	1	62,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	39639139	39653397	chr4:39639139-39653397	3	+	39639139	39639139	8553170	5	155,99,78,141,25,	0,2554,11237,12126,14233,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	39639139	39652072	chr4:39639139-39652072	1	+	39639139	39639139	8553170	3	155,99,807,	0,2554,12126,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	39639180	39651314	chr4:39639180-39651314	1	+	39639180	39639180	8553170	3	369,99,49,	0,2513,12085,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	39653203	39666644	chr4:39653203-39666644	1	+	39653203	39653203	8553170	2	262,522,	0,12919,
#Partially deleted in new
chr4	39698043	39782792	chr4:39698043-39782792	3	+	39698327	39778434	0	7	347,94,59,83,100,129,4433,	0,39376,47708,57613,76790,79638,80316,
#Partially deleted in new
chr4	39698108	39778384	chr4:39698108-39778384	0	+	39698327	39778384	789624	5	282,94,59,129,25,	0,39311,47643,79573,80251,
#Partially deleted in new
chr4	39698138	39779992	chr4:39698138-39779992	0	+	39698138	39698138	8553170	7	164,94,59,83,100,129,1633,	0,39281,47613,57518,76695,79543,80221,
#Partially deleted in new
chr4	39698138	39778607	chr4:39698138-39778607	0	+	39698138	39698138	8553170	6	252,59,83,100,129,248,	0,47613,57518,76695,79543,80221,
#Partially deleted in new
chr4	39698162	39778710	chr4:39698162-39778710	1	+	39698327	39778434	0	5	228,83,100,129,351,	0,57494,76671,79519,80197,
#Partially deleted in new
chr4	39698175	39779983	chr4:39698175-39779983	1	+	39698327	39778434	0	6	215,94,59,83,100,1624,	0,39244,47576,57481,76658,80184,
#Partially deleted in new
chr4	39698327	39778633	chr4:39698327-39778633	0	+	39698327	39774905	789624	4	63,100,129,274,	0,76506,79354,80032,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	39710084	39710176	chr4:39710084-39710176	3	-	39710084	39710084	8553170	1	92,	0,
#Partially deleted in new
chr4	39713841	39714451	chr4:39713841-39714451	7	-	39713841	39713841	16724991	2	46,241,	0,369,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	39760999	39761298	chr4:39760999-39761298	3	+	39760999	39760999	8553170	1	299,	0,
#Partially deleted in new
chr4	39770080	39771371	chr4:39770080-39771371	7	-	39770080	39770080	16724991	3	387,372,363,	0,516,928,
#Partially deleted in new
chr4	39822862	39977956	chr4:39822862-39977956	3	-	39825484	39976577	789624	33	2626,353,109,146,63,120,133,115,205,124,137,69,159,124,161,106,116,140,49,82,114,152,146,95,116,141,81,127,98,87,204,178,500,	0,14993,19085,21793,22955,25988,26657,39356,40006,40473,43998,46531,50123,51426,54130,56865,67386,75526,75914,77563,79484,81177,85532,87381,90748,94185,97456,99759,102973,103912,105098,153577,154594,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	39837011	39848561	chr4:39837011-39848561	0	-	39837011	39837011	8553170	4	1197,109,146,2744,	0,4936,7644,8806,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	39862985	39874408	chr4:39862985-39874408	0	-	39868702	39874408	789624	7	88,124,155,66,69,159,120,	0,350,3875,5684,6408,10000,11303,
#Partially deleted in new
chr4	39872791	39874400	chr4:39872791-39874400	0	-	39872791	39872791	8553170	2	353,112,	0,1497,
#Partially deleted in new
chr4	39898013	39977956	chr4:39898013-39977956	1	-	39898355	39976577	789624	16	515,49,82,114,152,146,95,116,141,81,127,98,87,204,178,500,	0,763,2412,4333,6026,10381,12230,15597,19034,22305,24608,27822,28761,29947,78426,79443,
#Partially deleted in new
chr4	39900425	39928106	chr4:39900425-39928106	0	-	39900425	39928106	789624	4	82,114,152,146,	0,1921,3614,27535,
#Partially deleted in new
chr4	39900454	39913726	chr4:39900454-39913726	0	-	39908524	39913726	789624	5	53,114,152,146,116,	0,1892,3585,7940,13156,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	39904041	39908884	chr4:39904041-39908884	0	-	39904041	39904041	8553170	2	150,490,	0,4353,
#Partially deleted in new
chr4	39910064	39913687	chr4:39910064-39913687	0	-	39910064	39910064	8553170	2	274,77,	0,3546,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	39932453	39933561	chr4:39932453-39933561	7	+	39932453	39932453	16724991	3	438,103,91,	0,735,1017,
#Partially deleted in new
chr4	39936752	39936855	chr4:39936752-39936855	7	+	39936752	39936752	16724991	1	103,	0,
#Partially deleted in new
chr4	39973127	39973442	chr4:39973127-39973442	7	-	39973127	39973127	16724991	1	315,	0,
#Partially deleted in new
chr4	39973443	39974338	chr4:39973443-39974338	7	+	39973443	39973443	16724991	2	399,192,	0,703,
#Deleted in new
chr4	39976112	39977510	chr4:39976112-39977510	0	-	39976112	39976112	8553170	2	505,54,	0,1344,
#Partially deleted in new
chr4	40020239	40021517	chr4:40020239-40021517	7	+	40020239	40020239	16724991	1	1278,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	40042916	40057199	chr4:40042916-40057199	5	-	40042916	40042916	16724991	3	1268,106,239,	0,2048,14044,
#Deleted in new
chr4	40043198	40044135	chr4:40043198-40044135	7	-	40043198	40043198	16724991	1	937,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr4	40056825	40158252	chr4:40056825-40158252	3	+	40097340	40154237	0	18	205,97,343,1144,125,89,77,156,2378,86,46,197,119,139,189,169,124,4061,	0,16629,40401,45249,50074,55258,56606,61043,63106,66301,67334,69308,74975,80118,85847,87806,95954,97366,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr4	40056912	40158251	chr4:40056912-40158251	0	+	40097340	40100106	789624	19	118,97,343,91,1144,125,89,77,156,2378,86,46,197,119,139,189,169,124,4060,	0,16542,40314,43123,45162,49987,55171,56519,60956,63019,66214,67247,69221,74888,80031,85760,87719,95867,97279,
#Partially deleted in new
chr4	40056935	40102606	chr4:40056935-40102606	0	+	40102085	40102606	789624	3	95,97,532,	0,16519,45139,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	40077883	40077982	chr4:40077883-40077982	3	+	40077883	40077883	8553170	1	99,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	40082982	40083106	chr4:40082982-40083106	3	+	40082982	40082982	8553170	1	124,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	40102906	40155397	chr4:40102906-40155397	0	+	40102906	40154237	789624	15	312,125,89,77,156,2378,86,46,197,119,139,138,169,124,1206,	0,3993,9177,10525,14962,17025,20220,21253,23227,28894,34037,39817,41725,49873,51285,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	40142197	40142365	chr4:40142197-40142365	7	-	40142197	40142197	16724991	1	168,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	40166674	40167831	chr4:40166674-40167831	3	+	40166674	40166674	8553170	1	1157,	0,
#Partially deleted in new
chr4	40191052	40243995	chr4:40191052-40243995	3	+	40243386	40243962	789624	3	286,121,818,	0,51661,52125,
#Partially deleted in new
chr4	40192966	40243713	chr4:40192966-40243713	0	+	40243386	40243713	789624	3	157,121,536,	0,49747,50211,
#Partially deleted in new
chr4	40192966	40244764	chr4:40192966-40244764	1	+	40243386	40243962	789624	3	157,121,1587,	0,49747,50211,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	40192966	40244764	chr4:40192966-40244764	1	+	40243386	40243962	789624	5	157,180,182,121,1587,	0,4154,42210,49747,50211,
#Partially deleted in new
chr4	40192967	40243257	chr4:40192967-40243257	0	+	40192967	40192967	8553170	4	156,200,121,80,	0,4133,49746,50210,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	40192989	40243434	chr4:40192989-40243434	0	+	40243386	40243434	789624	5	134,180,182,121,257,	0,4131,42187,49724,50188,
#Partially deleted in new
chr4	40193045	40243221	chr4:40193045-40243221	0	+	40193045	40193045	8553170	4	78,180,121,44,	0,4075,49668,50132,
#Partially deleted in new
chr4	40193648	40244764	chr4:40193648-40244764	1	+	40243386	40243962	789624	3	164,121,1587,	0,49065,49529,
#Partially deleted in new
chr4	40193662	40243695	chr4:40193662-40243695	0	+	40243386	40243695	789624	3	150,121,518,	0,49051,49515,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	40196906	40246967	chr4:40196906-40246967	1	+	40243386	40243962	789624	3	394,121,3790,	0,45807,46271,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	40196906	40244764	chr4:40196906-40244764	1	+	40243386	40243962	789624	4	394,166,121,1587,	0,38286,45807,46271,
#Partially deleted in new
chr4	40196906	40244764	chr4:40196906-40244764	1	+	40243386	40243962	789624	3	394,133,1587,	0,45807,46271,
#Partially deleted in new
chr4	40196906	40244764	chr4:40196906-40244764	1	+	40243386	40243962	789624	4	394,54,121,1587,	0,3605,45807,46271,
#Partially deleted in new
chr4	40196906	40244764	chr4:40196906-40244764	1	+	40243386	40243962	789624	4	394,128,121,1587,	0,15757,45807,46271,
#Partially deleted in new
chr4	40196906	40244764	chr4:40196906-40244764	1	+	40243386	40243962	789624	4	394,152,121,1587,	0,21240,45807,46271,
#Partially deleted in new
chr4	40196988	40218180	chr4:40196988-40218180	0	+	40196988	40196988	8553170	3	312,110,138,	0,15675,21054,
#Partially deleted in new
chr4	40196994	40243193	chr4:40196994-40243193	0	+	40196994	40196994	8553170	4	306,128,121,16,	0,15669,45719,46183,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	40197032	40242801	chr4:40197032-40242801	0	+	40197032	40197032	8553170	3	268,218,88,	0,43095,45681,
#Partially deleted in new
chr4	40197033	40243309	chr4:40197033-40243309	0	+	40197033	40197033	8553170	4	267,54,121,132,	0,3478,45680,46144,
#Partially deleted in new
chr4	40197057	40243210	chr4:40197057-40243210	0	+	40197057	40197057	8553170	4	243,152,121,33,	0,21089,45656,46120,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	40197060	40209669	chr4:40197060-40209669	0	+	40197060	40197060	8553170	3	240,140,207,	0,8632,12402,
#Partially deleted in new
chr4	40197244	40243187	chr4:40197244-40243187	0	+	40197244	40197244	8553170	2	56,474,	0,45469,
#Partially deleted in new
chr4	40200343	40243405	chr4:40200343-40243405	0	+	40243386	40243405	8553170	3	222,121,228,	0,42370,42834,
#Partially deleted in new
chr4	40200344	40243252	chr4:40200344-40243252	0	+	40200344	40200344	8553170	4	221,128,121,75,	0,12319,42369,42833,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	40265471	40266457	chr4:40265471-40266457	3	+	40265471	40265471	8553170	2	78,475,	0,511,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	40316484	40330419	chr4:40316484-40330419	3	+	40316484	40316484	789624	3	496,201,260,	0,10225,13675,
#Partially deleted in new
chr4	40335328	40355217	chr4:40335328-40355217	3	+	40335467	40354520	0	5	203,146,155,533,1239,	0,498,1881,13553,18650,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	40337285	40348139	chr4:40337285-40348139	0	+	40337285	40337285	8553170	3	79,190,353,	0,766,10501,
#Partially deleted in new
chr4	40349586	40354094	chr4:40349586-40354094	0	+	40349586	40349586	8553170	2	349,116,	0,4392,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	40377451	40377513	chr4:40377451-40377513	3	-	40377451	40377451	8553170	1	62,	0,
#Partially deleted in new
chr4	40423266	40514758	chr4:40423266-40514758	1	-	40425903	40438893	0	6	2877,212,207,1154,123,243,	0,9384,13174,14504,43310,91249,
#Partially deleted in new
chr4	40423266	40515973	chr4:40423266-40515973	3	-	40425903	40438893	0	5	2877,212,1154,123,107,	0,9384,14504,43310,92600,
#Partially deleted in new
chr4	40423680	40629864	chr4:40423680-40629864	0	-	40436826	40438893	789624	7	2463,212,445,1154,123,85,469,	0,8970,12760,14090,42896,120741,205715,
#Partially deleted in new
chr4	40424337	40629864	chr4:40424337-40629864	1	-	40425903	40438893	0	7	1806,212,207,1154,123,85,469,	0,8313,12103,13433,42239,120084,205058,
#Partially deleted in new
chr4	40425411	40630623	chr4:40425411-40630623	1	-	40425903	40438779	789624	6	732,212,207,1027,80,161,	0,7239,11029,12359,119015,205051,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	40426118	40427585	chr4:40426118-40427585	3	+	40426118	40426118	8553170	2	64,798,	0,669,
#Partially deleted in new
chr4	40432702	40466645	chr4:40432702-40466645	0	-	40432702	40432702	8553170	2	160,69,	0,33874,
#Partially deleted in new
chr4	40438241	40630316	chr4:40438241-40630316	0	-	40438241	40438893	789624	4	683,123,85,209,	0,28335,106180,191866,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	40438314	40514543	chr4:40438314-40514543	0	-	40438314	40438893	789624	4	610,121,123,28,	0,17160,28262,76201,
#Partially deleted in new
chr4	40438417	40630845	chr4:40438417-40630845	0	-	40438417	40438893	789624	4	507,123,159,67,	0,28159,192045,192361,
#Partially deleted in new
chr4	40438481	40630123	chr4:40438481-40630123	0	-	40438481	40438893	789624	4	443,123,85,146,	0,28095,105940,191496,
#Partially deleted in new
chr4	40438522	40475749	chr4:40438522-40475749	0	-	40438522	40438893	789624	3	402,123,57,	0,28054,37170,
#Partially deleted in new
chr4	40438552	40630875	chr4:40438552-40630875	0	-	40438552	40438893	789624	5	372,123,85,159,97,	0,28024,105869,191910,192226,
#Partially deleted in new
chr4	40438714	40630786	chr4:40438714-40630786	0	-	40438715	40438893	789624	3	210,123,324,	0,27862,191748,
#Partially deleted in new
chr4	40438715	40630786	chr4:40438715-40630786	0	-	40438715	40438893	789624	4	209,123,85,324,	0,27861,105706,191747,
#Deleted in new
chr4	40491732	40492024	chr4:40491732-40492024	7	+	40491732	40491732	16724991	1	292,	0,
#Deleted in new
chr4	40502039	40502119	chr4:40502039-40502119	3	-	40502039	40502039	5263520	1	80,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	40542522	40629529	chr4:40542522-40629529	0	-	40542522	40542522	8553170	2	1984,134,	0,86873,
#Partially deleted in new
chr4	40749896	40809985	chr4:40749896-40809985	3	+	40750693	40808939	789624	12	404,389,59,131,153,184,211,144,102,118,124,1679,	0,706,10537,11274,24368,24870,26152,40705,44478,48890,57164,58410,
#Partially deleted in new
chr4	40749924	40809985	chr4:40749924-40809985	1	+	40750693	40808334	789624	11	376,389,59,131,153,184,211,144,102,118,1679,	0,678,10509,11246,24340,24842,26124,40677,44450,48862,58382,
#Partially deleted in new
chr4	40749963	40775456	chr4:40749963-40775456	0	+	40749963	40749963	8553170	6	337,389,59,131,153,690,	0,639,10470,11207,24301,24803,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	40762605	40776188	chr4:40762605-40776188	0	+	40762605	40762605	8553170	5	103,183,153,184,140,	0,10450,11659,12161,13443,
#Partially deleted in new
chr4	40774264	40776476	chr4:40774264-40776476	0	+	40774264	40774264	8553170	3	153,184,428,	0,502,1784,
#Partially deleted in new
chr4	40776074	40808503	chr4:40776074-40808503	0	+	40776074	40776074	8553170	5	185,102,118,124,197,	0,18300,22712,30986,32232,
#Deleted in new
chr4	40786109	40786710	chr4:40786109-40786710	7	+	40786109	40786109	16724991	1	601,	0,
#Partially deleted in new
chr4	40798873	40808543	chr4:40798873-40808543	0	+	40798873	40798873	8553170	3	31,124,258,	0,8187,9412,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr4	40810026	41214618	chr4:40810026-41214618	1	-	40816091	41033254	789624	18	6233,180,116,84,88,115,128,147,61,86,63,206,816,69,98,112,156,214,	0,11844,13617,15860,17105,20436,80337,83238,124429,124587,125050,134838,203556,223209,255549,290612,332960,404378,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	40810027	40857155	chr4:40810027-40857155	1	-	40816091	40827216	789624	7	6232,180,116,84,88,121,171,	0,11843,13616,15859,17104,20435,46957,
#Partially deleted in new
chr4	40812778	40826151	chr4:40812778-40826151	3	+	40812778	40812778	8553170	2	79,398,	0,12975,
#Partially deleted in new
chr4	40814606	41214458	chr4:40814606-41214458	3	-	40816091	41033254	789624	17	1653,180,116,81,88,115,128,147,61,86,206,816,69,98,112,156,54,	0,7264,9037,11280,12525,15856,75757,78658,119849,120007,130258,198976,218629,250969,286032,328380,399798,
#Partially deleted in new
chr4	40815312	41014385	chr4:40815312-41014385	0	-	40816091	41014385	789624	12	947,180,116,84,88,115,128,147,61,86,209,803,	0,6558,8331,10574,11819,15150,75051,77952,119143,119301,129552,198270,
#Partially deleted in new
chr4	40815323	41214532	chr4:40815323-41214532	1	-	40816091	41033254	789624	18	936,180,116,84,88,115,128,147,61,86,63,209,816,69,98,112,156,128,	0,6547,8320,10563,11808,15139,75040,77941,119132,119290,119753,129541,198259,217912,250252,285315,327663,399081,
#Partially deleted in new
chr4	40815332	40857155	chr4:40815332-40857155	1	-	40816091	40827216	789624	7	927,180,116,84,88,115,171,	0,6538,8311,10554,11799,15130,41652,
#Partially deleted in new
chr4	40815616	41214615	chr4:40815616-41214615	1	-	40816091	41033254	789624	17	643,180,116,84,88,115,128,147,61,86,206,816,69,98,112,156,211,	0,6254,8027,10270,11515,14846,74747,77648,118839,118997,129248,197966,217619,249959,285022,327370,398788,
#Partially deleted in new
chr4	40815745	40857155	chr4:40815745-40857155	1	-	40816091	40827216	789624	8	514,180,116,84,88,115,6,171,	0,6125,7898,10141,11386,14717,26624,41239,
#Partially deleted in new
chr4	40815972	40822466	chr4:40815972-40822466	0	-	40815972	40815972	8553170	2	287,596,	0,5898,
#Partially deleted in new
chr4	40816084	40830515	chr4:40816084-40830515	0	-	40827152	40830515	789624	6	175,180,116,84,88,58,	0,5786,7559,9802,11047,14373,
#Partially deleted in new
chr4	40821982	40890425	chr4:40821982-40890425	0	-	40821982	40890425	789624	7	68,116,84,88,115,6,62,	0,1661,3904,5149,8480,20387,68381,
#Partially deleted in new
chr4	40822029	40857192	chr4:40822029-40857192	0	-	40822029	40827216	789624	6	21,116,84,88,115,167,	0,1614,3857,5102,8433,34996,
#Partially deleted in new
chr4	40823643	40842516	chr4:40823643-40842516	0	-	40823643	40827216	789624	5	116,84,88,115,147,	0,2243,3488,6819,18726,
#Partially deleted in new
chr4	40823665	40890914	chr4:40823665-40890914	0	-	40823665	40823665	8553170	6	94,84,88,115,128,66,	0,2221,3466,6797,66698,67183,
#Partially deleted in new
chr4	40823667	40857177	chr4:40823667-40857177	0	-	40823667	40827216	789624	6	92,84,88,115,6,152,	0,2219,3464,6795,18702,33358,
#Partially deleted in new
chr4	40825886	40893272	chr4:40825886-40893272	0	-	40825886	40893272	789624	6	81,88,115,6,128,8,	0,1245,4576,16483,64477,67378,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	40826654	40826765	chr4:40826654-40826765	3	-	40826654	40826654	8553170	1	111,	0,
#Partially deleted in new
chr4	40826785	40934487	chr4:40826785-40934487	0	-	40826785	40826785	8553170	5	434,115,128,147,32,	0,3677,63578,66479,107670,
#Partially deleted in new
chr4	40890308	41014385	chr4:40890308-41014385	0	-	40890308	40890308	8553170	6	183,147,61,86,206,803,	0,2956,44147,44305,54556,123274,
#Partially deleted in new
chr4	40892394	40935626	chr4:40892394-40935626	0	-	40892394	40892394	8553170	3	1017,61,1013,	0,42061,42219,
#Partially deleted in new
chr4	40893362	40935440	chr4:40893362-40935440	0	-	40893362	40893362	8553170	4	49,61,86,364,	0,41093,41251,41714,
#Partially deleted in new
chr4	41013946	41214493	chr4:41013946-41214493	0	-	41013946	41014366	789624	5	452,98,112,156,89,	0,51629,86692,129040,200458,
#Partially deleted in new
chr4	41014212	41214520	chr4:41014212-41214520	0	-	41014212	41033254	789624	5	186,69,112,156,116,	0,19023,86426,128774,200192,
#Partially deleted in new
chr4	41014287	41214518	chr4:41014287-41214518	0	-	41014287	41014366	789624	4	111,112,156,114,	0,86351,128699,200117,
#Partially deleted in new
chr4	41014335	41214608	chr4:41014335-41214608	0	-	41014335	41033254	789624	5	63,69,112,156,204,	0,18900,86303,128651,200069,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	41033289	41214569	chr4:41033289-41214569	0	-	41033289	41033289	8553170	5	15,112,117,156,165,	0,67349,84799,109697,181115,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	41065589	41207908	chr4:41065589-41207908	0	-	41065589	41065589	8553170	5	84,112,156,132,72,	0,35049,77397,111969,142247,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	41065604	41214569	chr4:41065604-41214569	0	-	41065604	41065604	8553170	5	69,112,117,156,165,	0,35034,52484,77382,148800,
#Partially deleted in new
chr4	41065668	41216714	chr4:41065668-41216714	0	-	41065668	41065668	8553170	4	5,112,156,209,	0,34970,77318,150837,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	41084606	41084713	chr4:41084606-41084713	3	+	41084606	41084606	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	41193792	41214497	chr4:41193792-41214497	0	-	41193792	41193792	8553170	2	353,93,	0,20612,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	41220073	41256727	chr4:41220073-41256727	3	-	41220073	41220073	789624	3	275,148,169,	0,1263,36485,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	41253882	41256721	chr4:41253882-41256721	1	-	41253882	41253882	8553170	2	288,163,	0,2676,
#Deleted in new
chr4	41256412	41257737	chr4:41256412-41257737	0	+	41256976	41257737	789624	5	75,169,60,12,129,	0,180,537,702,1196,
#Partially deleted in new
chr4	41256768	41268256	chr4:41256768-41268256	1	+	41256976	41268073	0	10	35,60,12,129,151,86,48,67,59,270,	0,181,346,840,3878,4946,5107,6456,7334,11218,
#Partially deleted in new
chr4	41256832	41268429	chr4:41256832-41268429	3	+	41256976	41268073	0	9	177,12,129,151,86,48,67,59,443,	0,282,776,3814,4882,5043,6392,7270,11154,
#Partially deleted in new
chr4	41256907	41268428	chr4:41256907-41268428	0	+	41256907	41256907	8553170	8	102,623,151,86,48,67,59,442,	0,207,3739,4807,4968,6317,7195,11079,
#Partially deleted in new
chr4	41256910	41268455	chr4:41256910-41268455	0	+	41256976	41260683	789624	8	110,129,151,86,48,67,59,469,	0,698,3736,4804,4965,6314,7192,11076,
#Partially deleted in new
chr4	41256931	41268108	chr4:41256931-41268108	0	+	41256976	41263240	789624	9	78,12,129,151,86,48,63,59,122,	0,183,677,3715,4783,4944,6297,7171,11055,
#Partially deleted in new
chr4	41256932	41261923	chr4:41256932-41261923	0	+	41256932	41256932	8553170	5	77,364,151,86,48,	0,441,3714,4782,4943,
#Partially deleted in new
chr4	41256939	41268239	chr4:41256939-41268239	1	+	41256976	41268073	789624	8	70,12,129,151,86,67,59,253,	0,175,669,3707,4775,6285,7163,11047,
#Partially deleted in new
chr4	41256944	41268125	chr4:41256944-41268125	1	+	41256976	41268098	789624	9	65,12,129,151,86,48,67,88,139,	0,170,664,3702,4770,4931,6280,7158,11042,
#Partially deleted in new
chr4	41256945	41268427	chr4:41256945-41268427	0	+	41256945	41256945	8553170	8	75,623,151,86,48,67,59,441,	0,169,3701,4769,4930,6279,7157,11041,
#Partially deleted in new
chr4	41260638	41268429	chr4:41260638-41268429	0	+	41260638	41260638	8553170	6	159,86,48,67,59,443,	0,1076,1237,2586,3464,7348,
#Partially deleted in new
chr4	41261738	41264465	chr4:41261738-41264465	0	+	41261738	41261738	8553170	4	62,48,67,363,	0,137,1486,2364,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	41303236	41303337	chr4:41303236-41303337	3	-	41303236	41303236	8553170	1	101,	0,
#Partially deleted in new
chr4	41359606	41699003	chr4:41359606-41699003	1	+	41605995	41697185	789624	26	197,71,70,107,31,111,196,253,127,158,409,216,91,164,106,75,41,81,93,105,128,122,121,109,103,1844,	0,134929,164802,239313,244268,246287,253859,259581,284893,286516,286878,290786,301813,303214,306954,311111,311947,316775,320399,321348,322726,324790,326103,329920,332675,337553,
#Partially deleted in new
chr4	41360630	41619936	chr4:41360630-41619936	1	+	41605995	41619444	789624	7	306,70,107,31,111,196,749,	0,163778,238289,243244,245263,252835,258557,
#Partially deleted in new
chr4	41360784	41699012	chr4:41360784-41699012	1	+	41360840	41697185	789624	26	152,71,70,107,31,111,196,253,36,127,158,409,216,91,164,106,41,81,93,105,128,122,121,109,103,1853,	0,133751,163624,238135,243090,245109,252681,258403,278147,283715,285338,285700,289608,300635,302036,305776,310769,315597,319221,320170,321548,323612,324925,328742,331497,336375,
#Partially deleted in new
chr4	41360784	41699012	chr4:41360784-41699012	1	+	41360840	41697185	789624	26	152,71,70,107,31,111,196,253,36,127,158,409,216,91,164,106,41,84,93,105,128,122,121,109,103,1853,	0,133751,163624,238135,243090,245109,252681,258403,278147,283715,285338,285700,289608,300635,302036,305776,310769,315594,319221,320170,321548,323612,324925,328742,331497,336375,
#Partially deleted in new
chr4	41360786	41700044	chr4:41360786-41700044	3	+	41360840	41697185	789624	27	150,71,70,107,31,111,196,253,36,127,158,409,216,91,164,106,41,84,93,105,128,122,121,78,109,103,2885,	0,133749,163622,238133,243088,245107,252679,258401,278145,283713,285336,285698,289606,300633,302034,305774,310767,315592,319219,320168,321546,323610,324923,327053,328740,331495,336373,
#Partially deleted in new
chr4	41360806	41599121	chr4:41360806-41599121	0	+	41360806	41360806	8553170	4	130,71,70,202,	0,133729,163602,238113,
#Partially deleted in new
chr4	41360806	41699000	chr4:41360806-41699000	1	+	41360840	41697185	789624	23	130,71,70,107,31,111,196,253,36,127,158,409,216,91,164,93,105,128,122,121,109,103,1841,	0,133729,163602,238113,243068,245087,252659,258381,278125,283693,285316,285678,289586,300613,302014,319199,320148,321526,323590,324903,328720,331475,336353,
#Partially deleted in new
chr4	41360808	41613557	chr4:41360808-41613557	0	+	41360808	41360808	8553170	6	128,71,107,31,111,92,	0,133727,238111,243066,245085,252657,
#Partially deleted in new
chr4	41360814	41699020	chr4:41360814-41699020	1	+	41360840	41697185	789624	26	122,71,70,107,31,111,196,253,127,158,409,216,91,164,106,75,41,81,93,105,128,122,121,109,103,1861,	0,133721,163594,238105,243060,245079,252651,258373,283685,285308,285670,289578,300605,302006,305746,309903,310739,315567,319191,320140,321518,323582,324895,328712,331467,336345,
#Partially deleted in new
chr4	41385802	41613534	chr4:41385802-41613534	0	+	41605995	41613534	789624	7	92,71,70,107,31,111,69,	0,108733,138606,213117,218072,220091,227663,
#Partially deleted in new
chr4	41385978	41619362	chr4:41385978-41619362	0	+	41605995	41619362	789624	8	28,71,70,107,31,111,196,175,	0,108557,138430,212941,217896,219915,227487,233209,
#Partially deleted in new
chr4	41389114	41389593	chr4:41389114-41389593	7	+	41389114	41389114	16724991	1	479,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	41418738	41598948	chr4:41418738-41598948	0	+	41418738	41418738	8553170	7	56,122,71,70,67,75,29,	0,34826,75797,105670,132386,132582,180181,
#Partially deleted in new
chr4	41538156	41697814	chr4:41538156-41697814	1	+	41605995	41697185	789624	32	194,107,31,111,196,253,267,303,243,330,119,109,261,36,127,158,409,216,91,164,106,41,81,93,105,128,122,121,78,109,103,655,	0,60763,65718,67737,75309,81031,82267,88551,91335,92991,94592,94820,95391,100775,106343,107966,108328,112236,123263,124664,128404,133397,138225,141849,142798,144176,146240,147553,149683,151370,154125,159003,
#Partially deleted in new
chr4	41538173	41697544	chr4:41538173-41697544	1	+	41605995	41697185	789624	23	177,107,111,196,253,36,127,158,409,216,91,164,106,41,81,93,105,128,122,121,109,103,385,	0,60746,67720,75292,81014,100758,106326,107949,108311,112219,123246,124647,128387,133380,138208,141832,142781,144159,146223,147536,151353,154108,158986,
#Partially deleted in new
chr4	41612338	41697814	chr4:41612338-41697814	1	+	41612558	41697185	789624	20	265,196,253,127,158,409,216,91,164,106,41,81,93,105,128,122,121,109,103,655,	0,1127,6849,32161,33784,34146,38054,49081,50482,54222,59215,64043,67667,68616,69994,72058,73371,77188,79943,84821,
#Partially deleted in new
chr4	41612708	41697542	chr4:41612708-41697542	1	+	41613074	41697185	789624	21	390,196,253,127,158,409,216,91,164,106,41,81,93,105,128,122,121,78,109,103,383,	0,757,6479,31791,33414,33776,37684,48711,50112,53852,58845,63673,67297,68246,69624,71688,73001,75131,76818,79573,84451,
#Partially deleted in new
chr4	41612901	41700044	chr4:41612901-41700044	1	+	41613074	41697185	789624	20	197,196,253,127,158,409,216,91,164,106,41,81,93,105,128,122,121,109,103,2885,	0,564,6286,31598,33221,33583,37491,48518,49919,53659,58652,63480,67104,68053,69431,71495,72808,76625,79380,84258,
#Partially deleted in new
chr4	41612901	41700043	chr4:41612901-41700043	1	+	41613074	41697185	789624	21	197,196,253,36,127,158,409,216,91,164,106,41,81,93,105,128,122,121,109,103,2884,	0,564,6286,26030,31598,33221,33583,37491,48518,49919,53659,58652,63480,67104,68053,69431,71495,72808,76625,79380,84258,
#Partially deleted in new
chr4	41612901	41620294	chr4:41612901-41620294	1	+	41613074	41619444	789624	3	203,196,1107,	0,564,6286,
#Partially deleted in new
chr4	41613475	41697483	chr4:41613475-41697483	0	+	41613475	41697185	789624	21	186,253,36,127,158,409,216,91,164,106,41,81,93,105,128,122,121,78,109,103,324,	0,5712,25456,31024,32647,33009,36917,47944,49345,53085,58078,62906,66530,67479,68857,70921,72234,74364,76051,78806,83684,
#Partially deleted in new
chr4	41688857	41692797	chr4:41688857-41692797	3	-	41688857	41688857	8553170	3	70,109,256,	0,786,3684,
#Partially deleted in new
chr4	41692954	41697895	chr4:41692954-41697895	0	+	41692954	41692954	8553170	2	393,736,	0,4205,
#Partially deleted in new
chr4	41693195	41698479	chr4:41693195-41698479	0	+	41693195	41693195	8553170	3	152,155,130,	0,3964,5154,
#Partially deleted in new
chr4	41722537	41723512	chr4:41722537-41723512	7	-	41722537	41722537	16724991	2	319,299,	0,676,
#Deleted in new
chr4	41744081	41748970	chr4:41744081-41748970	3	-	41745806	41748610	789624	3	2241,188,601,	0,3267,4288,
#Deleted in new
chr4	41746032	41747709	chr4:41746032-41747709	0	-	41746032	41746032	8553170	3	290,188,62,	0,1316,1615,
#Partially deleted in new
chr4	41748292	41824119	chr4:41748292-41824119	3	+	41748292	41748292	8553170	5	294,135,159,83,236,	0,45912,46763,74850,75591,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	41750344	41757341	chr4:41750344-41757341	3	+	41750344	41750344	8553170	3	53,117,391,	0,5317,6606,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	41771944	41772103	chr4:41771944-41772103	3	-	41771944	41771944	8553170	1	159,	0,
#Partially deleted in new
chr4	41842153	41843950	chr4:41842153-41843950	7	-	41842153	41842153	16724991	3	102,221,229,	0,406,1568,
#Partially deleted in new
chr4	41872746	41882955	chr4:41872746-41882955	3	-	41872746	41872746	8553170	2	455,476,	0,9733,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	41876480	41882611	chr4:41876480-41882611	0	-	41876480	41876480	8553170	2	500,132,	0,5999,
#Deleted in new
chr4	41879520	41882570	chr4:41879520-41882570	1	-	41879520	41879520	789624	2	1293,91,	0,2959,
#Deleted in new
chr4	41879546	41881843	chr4:41879546-41881843	1	-	41879546	41879546	8553170	2	1267,358,	0,1939,
#Partially deleted in new
chr4	41883059	41894579	chr4:41883059-41894579	3	-	41883059	41883059	8553170	3	635,141,49,	0,9383,11471,
#Deleted in new
chr4	41924179	41924380	chr4:41924179-41924380	7	+	41924179	41924179	16724991	1	201,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	41935119	41960572	chr4:41935119-41960572	3	+	41935484	41954199	789624	7	410,95,188,68,134,84,6503,	0,3482,4076,8627,9673,14182,18950,
#Partially deleted in new
chr4	41935128	41954857	chr4:41935128-41954857	0	+	41935484	41943813	789624	6	401,95,68,134,84,788,	0,3473,8618,9664,14173,18941,
#Partially deleted in new
chr4	41935128	41954122	chr4:41935128-41954122	0	+	41935484	41954122	789624	8	182,63,95,188,68,134,84,53,	0,338,3473,4067,8618,9664,14173,18941,
#Partially deleted in new
chr4	41935128	41954395	chr4:41935128-41954395	1	+	41935484	41954199	789624	8	134,63,95,188,68,134,84,326,	0,338,3473,4067,8618,9664,14173,18941,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	41935151	41960041	chr4:41935151-41960041	1	+	41935484	41954199	789624	8	378,95,188,68,134,84,4104,1170,	0,3450,4044,8595,9641,14150,18918,23720,
#Partially deleted in new
chr4	41935383	41944202	chr4:41935383-41944202	0	+	41935383	41935383	8553170	3	146,95,456,	0,3218,8363,
#Partially deleted in new
chr4	41935443	41949384	chr4:41935443-41949384	0	+	41935484	41939787	789624	6	86,95,108,68,134,83,	0,3158,4277,8303,9349,13858,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	41939254	41954021	chr4:41939254-41954021	0	+	41939254	41953811	789624	5	129,68,134,84,262,	0,4492,5538,10047,14505,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	41981695	41986467	chr4:41981695-41986467	3	+	41981792	41982983	789624	1	4772,	0,
#Deleted in new
chr4	41988740	41989237	chr4:41988740-41989237	3	-	41988740	41988740	8553170	1	497,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr4	41990471	42090457	chr4:41990471-42090457	3	+	41990651	42086126	0	18	289,165,60,100,93,83,59,68,103,56,136,40,72,108,166,130,114,4376,	0,11144,27639,29944,32366,32830,44803,48514,58905,69719,72514,74838,76078,76613,80054,85185,87740,95610,
#Partially deleted in new
chr4	41990501	42086369	chr4:41990501-42086369	0	+	41990651	42018414	789624	19	259,165,60,117,100,93,83,59,68,103,56,136,40,72,108,166,130,114,288,	0,11114,27609,27887,29914,32336,32800,44773,48484,58875,69689,72484,74808,76048,76583,80024,85155,87710,95580,
#Partially deleted in new
chr4	41990526	42020775	chr4:41990526-42020775	0	+	41990526	41990526	8553170	4	234,165,60,360,	0,11089,27584,29889,
#Partially deleted in new
chr4	42029208	42030123	chr4:42029208-42030123	7	+	42029208	42029208	16724991	1	915,	0,
#Partially deleted in new
chr4	42063033	42078851	chr4:42063033-42078851	0	+	42063033	42063033	8553170	6	88,40,72,108,130,640,	0,2276,3516,4051,12623,15178,
#Partially deleted in new
chr4	42070188	42086376	chr4:42070188-42086376	0	+	42070188	42070188	8553170	5	104,166,130,114,295,	0,337,5468,8023,15893,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	42110937	42152878	chr4:42110937-42152878	3	-	42117517	42152143	789624	6	6798,241,92,567,720,347,	0,9116,14645,32490,40719,41594,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	42110939	42152878	chr4:42110939-42152878	1	-	42117725	42152131	789624	6	6796,170,92,567,720,347,	0,9185,14643,32488,40717,41592,
#Partially deleted in new
chr4	42117439	42152183	chr4:42117439-42152183	1	-	42117517	42152131	789624	6	296,241,92,567,17,135,	0,2614,8143,25988,34217,34609,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	42151027	42268110	chr4:42151027-42268110	3	+	42151027	42151027	8553170	7	536,111,205,298,71,61,1042,	0,59346,87666,99893,108784,113097,116041,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	42281829	42391233	chr4:42281829-42391233	3	-	42281829	42281829	8553170	3	420,119,59,	0,1443,109345,
#Partially deleted in new
chr4	42299011	42391268	chr4:42299011-42391268	1	-	42299011	42299011	789624	2	300,94,	0,92163,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	42352503	42391259	chr4:42352503-42391259	1	-	42352503	42352503	8553170	2	393,85,	0,38671,
#Deleted in new
chr4	42397838	42402487	chr4:42397838-42402487	3	+	42398056	42401451	789624	2	495,1476,	0,3173,
#Partially deleted in new
chr4	42408372	42657105	chr4:42408372-42657105	3	-	42412915	42656873	789624	37	4641,92,93,89,108,57,62,79,123,75,111,184,173,65,139,140,85,70,50,83,106,73,45,89,78,128,166,112,128,70,74,41,46,99,100,115,281,	0,6254,14434,15244,35192,36205,38210,43608,46924,47152,56317,56520,77123,95077,98643,113787,116390,135544,140640,142825,144132,147595,160788,166246,167249,169887,171440,173248,177976,179887,182438,192105,207660,216163,217241,218622,248452,
#Partially deleted in new
chr4	42408372	42507154	chr4:42408372-42507154	0	-	42465052	42507154	789624	14	4641,92,93,89,108,57,62,79,123,75,111,184,65,139,	0,6254,14434,15244,35192,36205,38210,43608,46924,47152,56317,56520,95077,98643,
#Partially deleted in new
chr4	42408376	42657093	chr4:42408376-42657093	1	-	42412915	42656873	789624	36	4637,92,93,89,108,57,62,79,123,75,111,184,173,65,139,140,85,70,50,83,106,73,89,78,128,166,112,128,70,74,41,46,99,100,115,269,	0,6250,14430,15240,35188,36201,38206,43604,46920,47148,56313,56516,77119,95073,98639,113783,116386,135540,140636,142821,144128,147591,166242,167245,169883,171436,173244,177972,179883,185912,192101,207656,216159,217237,218618,248448,
#Partially deleted in new
chr4	42412974	42415147	chr4:42412974-42415147	0	-	42412974	42412974	8553170	2	39,521,	0,1652,
#Partially deleted in new
chr4	42423616	42485513	chr4:42423616-42485513	0	-	42455394	42485513	789624	10	89,108,57,62,79,137,75,111,184,18,	0,19948,20961,22966,28364,31680,31908,41073,41276,61879,
#Partially deleted in new
chr4	42459357	42465075	chr4:42459357-42465075	0	-	42459484	42465075	789624	3	175,111,183,	0,5332,5535,
#Deleted in new
chr4	42471809	42472380	chr4:42471809-42472380	7	+	42471809	42471809	16724991	1	571,	0,
#Partially deleted in new
chr4	42552554	42556235	chr4:42552554-42556235	0	-	42552554	42552554	8553170	2	56,268,	0,3413,
#Deleted in new
chr4	42561456	42562425	chr4:42561456-42562425	7	-	42561456	42561456	16724991	1	969,	0,
#Partially deleted in new
chr4	42581681	42588617	chr4:42581681-42588617	0	-	42581681	42581681	8553170	3	51,128,358,	0,4667,6578,
#Partially deleted in new
chr4	42581691	42616078	chr4:42581691-42616078	0	-	42588326	42616078	789624	5	41,128,70,41,46,	0,4657,6568,18786,34341,
#Partially deleted in new
chr4	42625140	42657093	chr4:42625140-42657093	1	-	42626990	42656873	789624	2	1969,269,	0,31684,
#Deleted in new
chr4	42657495	42657928	chr4:42657495-42657928	3	+	42657495	42657495	8553170	1	433,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	42706106	42707335	chr4:42706106-42707335	3	+	42706106	42706106	8553170	2	230,898,	0,331,
#Deleted in new
chr4	42892395	42892618	chr4:42892395-42892618	3	+	42892395	42892395	8553170	1	223,	0,
#Partially deleted in new
chr4	42893266	43030658	chr4:42893266-43030658	3	+	42893266	43030540	789624	4	384,243,66,298,	0,69625,127087,137094,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	43133866	43234956	chr4:43133866-43234956	3	+	43133866	43133866	8553170	5	120,106,37,154,189,	0,59420,62015,97368,100901,
#Partially deleted in new
chr4	43340874	43345600	chr4:43340874-43345600	3	+	43340874	43340874	8553170	5	74,73,82,201,223,	0,1306,1718,1950,4503,
#Partially deleted in new
chr4	43342796	43345598	chr4:43342796-43345598	0	+	43342796	43342796	8553170	2	229,221,	0,2581,
#Deleted in new
chr4	43388156	43388437	chr4:43388156-43388437	7	+	43388156	43388156	16724991	1	281,	0,
#Partially deleted in new
chr4	43410040	43410937	chr4:43410040-43410937	7	-	43410040	43410040	16724991	1	897,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	43457526	43492543	chr4:43457526-43492543	3	-	43457526	43457526	789624	3	244,230,108,	0,1053,34909,
#Deleted in new
chr4	43586327	43588097	chr4:43586327-43588097	7	+	43586327	43586327	16724991	1	1770,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	43598543	43598844	chr4:43598543-43598844	3	-	43598543	43598543	8553170	1	301,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	43863273	43863549	chr4:43863273-43863549	3	+	43863273	43863273	8553170	1	276,	0,
#Deleted in new
chr4	43898961	43899351	chr4:43898961-43899351	7	+	43898961	43898961	16724991	1	390,	0,
#Deleted in new
chr4	43980005	43981620	chr4:43980005-43981620	3	-	43980005	43980005	8553170	2	426,23,	0,1592,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	44016860	44020256	chr4:44016860-44020256	0	+	44016860	44016860	8553170	2	202,506,	0,2890,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	44017061	44022063	chr4:44017061-44022063	3	+	44017061	44017061	789624	2	309,2313,	0,2689,
#Partially deleted in new
chr4	44173908	44448807	chr4:44173908-44448807	3	-	44174789	44448523	789624	2	1342,1245,	0,273654,
#Partially deleted in new
chr4	44174954	44447613	chr4:44174954-44447613	0	-	44174954	44447613	789624	4	296,84,33,51,	0,118449,118844,272608,
#Deleted in new
chr4	44533614	44533880	chr4:44533614-44533880	7	+	44533614	44533614	16724991	1	266,	0,
#Partially deleted in new
chr4	44622064	44651628	chr4:44622064-44651628	3	-	44622413	44650100	789624	6	512,182,146,164,117,75,	0,2536,7338,13857,27920,29489,
#Partially deleted in new
chr4	44622336	44651641	chr4:44622336-44651641	1	-	44622413	44651624	789624	6	240,182,146,164,117,88,	0,2264,7066,13585,27648,29217,
#Partially deleted in new
chr4	44629170	44651641	chr4:44629170-44651641	0	-	44629170	44629170	8553170	3	378,117,88,	0,20814,22383,
#Partially deleted in new
chr4	44629170	44651641	chr4:44629170-44651641	0	-	44629170	44629170	8553170	4	378,169,117,88,	0,6746,20814,22383,
#Partially deleted in new
chr4	44649983	44678556	chr4:44649983-44678556	0	-	44649983	44650100	789624	3	118,170,196,	0,10465,28377,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr4	44678426	44700759	chr4:44678426-44700759	0	+	44678426	44678426	8553170	16	159,149,81,78,84,65,204,140,124,133,144,134,102,120,37,2216,	0,2267,2696,3907,4808,7532,8083,9580,10859,11416,12290,13239,15985,17188,18981,20117,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr4	44678428	44700926	chr4:44678428-44700926	3	+	44678622	44698681	789624	17	359,112,149,81,78,84,65,204,140,124,133,144,134,102,120,37,2383,	0,2012,2265,2694,3905,4806,7530,8081,9578,10857,11414,12288,13237,15983,17186,18979,20115,
#Partially deleted in new
chr4	44678493	44689409	chr4:44678493-44689409	0	+	44678622	44680825	789624	9	294,149,81,78,84,65,204,140,124,	0,2200,2629,3840,4741,7465,8016,9513,10792,
#Partially deleted in new
chr4	44682199	44707878	chr4:44682199-44707878	0	-	44682577	44707878	789624	2	443,127,	0,25552,
#Partially deleted in new
chr4	44682207	44711023	chr4:44682207-44711023	0	-	44682338	44711023	789624	4	177,61,175,71,	0,374,25544,28745,
#Deleted in new
chr4	44693945	44694386	chr4:44693945-44694386	3	-	44693945	44693945	8553170	1	441,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	44694408	44700679	chr4:44694408-44700679	0	+	44694408	44694408	8553170	3	105,37,2136,	0,2999,4135,
#Partially deleted in new
chr4	44701867	44726570	chr4:44701867-44726570	1	-	44703080	44722207	789624	6	1275,175,185,183,159,97,	0,5884,9085,15245,20216,24606,
#Partially deleted in new
chr4	44702138	44726595	chr4:44702138-44726595	3	-	44703080	44722207	789624	7	1004,175,185,183,102,159,122,	0,5613,8814,14974,16170,19945,24335,
#Partially deleted in new
chr4	44702787	44726523	chr4:44702787-44726523	1	-	44703080	44718324	789624	6	355,175,185,183,102,50,	0,4964,8165,14325,15521,23686,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	44703245	44726545	chr4:44703245-44726545	1	-	44707740	44722207	789624	6	4681,185,183,102,159,72,	0,7707,13867,15063,18838,23228,
#Deleted in new
chr4	44704404	44704965	chr4:44704404-44704965	3	+	44704404	44704404	8553170	1	561,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	44706411	44726588	chr4:44706411-44726588	0	-	44706411	44706411	8553170	2	1515,115,	0,20062,
#Deleted in new
chr4	44840379	44841402	chr4:44840379-44841402	7	-	44840379	44840379	16724991	1	1023,	0,
#Partially deleted in new
chr4	44944014	44944961	chr4:44944014-44944961	7	-	44944014	44944014	16724991	2	60,514,	0,433,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	44994425	44996022	chr4:44994425-44996022	7	+	44994425	44994425	16724991	1	1597,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	45009539	45051652	chr4:45009539-45051652	3	+	45009539	45009539	8553170	6	90,133,34,144,108,163,	0,4612,13207,13344,18814,41950,
#Partially deleted in new
chr4	45323252	45326028	chr4:45323252-45326028	7	-	45323252	45323252	16724991	2	1498,862,	0,1914,
#Partially deleted in new
chr4	45414336	45414910	chr4:45414336-45414910	7	-	45414336	45414336	16724991	1	574,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	45480029	45480136	chr4:45480029-45480136	3	+	45480029	45480029	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	45995118	45995423	chr4:45995118-45995423	3	+	45995118	45995118	8553170	1	305,	0,
#Partially deleted in new
chr4	46035768	46124081	chr4:46035768-46124081	3	-	46040987	46123913	789624	9	5486,215,153,138,83,221,68,149,272,	0,15655,22448,22716,28672,29595,48217,61432,88041,
#Partially deleted in new
chr4	46243547	46244215	chr4:46243547-46244215	3	-	46243547	46243547	8553170	1	668,	0,
#Partially deleted in new
chr4	46248426	46475230	chr4:46248426-46475230	3	-	46250307	46388706	789624	10	2178,203,153,144,83,221,68,116,81,164,	0,13499,55033,57141,61746,64069,84188,137647,140209,226640,
#Partially deleted in new
chr4	46248443	46389381	chr4:46248443-46389381	1	-	46250307	46388706	789624	10	2161,203,153,144,83,221,68,116,81,171,	0,13482,55016,57124,61729,64052,84171,137630,140192,140767,
#Partially deleted in new
chr4	46249342	46389928	chr4:46249342-46389928	1	-	46250307	46388706	789624	10	1262,203,153,144,83,221,68,116,81,194,	0,12583,54117,56225,60830,63153,83272,136731,139293,140392,
#Partially deleted in new
chr4	46249566	46389379	chr4:46249566-46389379	1	-	46250307	46388706	789624	9	1038,203,153,144,83,221,68,116,744,	0,12359,53893,56001,60606,62929,83048,136507,139069,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	46249566	46389788	chr4:46249566-46389788	0	-	46312702	46388706	789624	10	1038,180,203,153,144,83,221,116,81,54,	0,6628,12359,53893,56001,60606,62929,136507,139069,140168,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	46249570	46390039	chr4:46249570-46390039	1	-	46250307	46332617	789624	11	1034,180,203,153,144,83,221,68,116,81,305,	0,6624,12355,53889,55997,60602,62925,83044,136503,139065,140164,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	46250288	46388713	chr4:46250288-46388713	1	-	46250307	46388706	789624	10	316,180,203,153,144,83,221,68,116,78,	0,5906,11637,53171,55279,59884,62207,82326,135785,138347,
#Partially deleted in new
chr4	46250288	46388713	chr4:46250288-46388713	0	-	46303608	46388706	789624	7	316,203,153,221,68,116,78,	0,11637,53171,62207,82326,135785,138347,
#Partially deleted in new
chr4	46250288	46388713	chr4:46250288-46388713	0	-	46312702	46388706	789624	6	316,203,83,221,116,78,	0,11637,59884,62207,135785,138347,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	46260771	46390404	chr4:46260771-46390404	1	-	46261880	46388706	789624	9	1357,153,144,83,221,68,116,81,143,	0,42688,44796,49401,51724,71843,125302,127864,129490,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	46302506	46305577	chr4:46302506-46305577	0	-	46303451	46305577	789624	3	156,439,10,	0,667,3061,
#Partially deleted in new
chr4	46305692	46389788	chr4:46305692-46389788	0	-	46312702	46388706	789624	6	19,83,221,116,81,54,	0,4480,6803,80381,82943,84042,
#Partially deleted in new
chr4	46312516	46389363	chr4:46312516-46389363	0	-	46312516	46388706	789624	5	200,68,116,81,131,	0,20098,73557,76119,76716,
#Partially deleted in new
chr4	46312559	46389382	chr4:46312559-46389382	0	-	46312559	46388706	789624	5	157,68,116,81,160,	0,20055,73514,76076,76663,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	46363714	46389550	chr4:46363714-46389550	1	-	46368971	46388706	789624	4	5292,116,81,323,	0,22359,24921,25513,
#Deleted in new
chr4	46386073	46388713	chr4:46386073-46388713	0	-	46386073	46386073	8553170	3	116,169,78,	0,633,2562,
#Partially deleted in new
chr4	46390254	46433188	chr4:46390254-46433188	3	+	46390254	46390254	8553170	3	314,124,111,	0,630,42823,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	46531236	46531342	chr4:46531236-46531342	3	-	46531236	46531236	8553170	1	106,	0,
#Partially deleted in new
chr4	46723829	46724408	chr4:46723829-46724408	7	-	46723829	46723829	16724991	1	579,	0,
#Partially deleted in new
chr4	46734826	46909231	chr4:46734826-46909231	3	-	46734946	46735192	789624	3	415,55,72,	0,110133,174333,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	46734826	46909207	chr4:46734826-46909207	1	-	46734946	46735192	789624	4	415,55,99,48,	0,110133,141812,174333,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	46734831	46876760	chr4:46734831-46876760	1	-	46734946	46735189	789624	3	410,55,122,	0,110128,141807,
#Partially deleted in new
chr4	46735094	46909235	chr4:46735094-46909235	0	-	46735094	46735192	789624	4	147,55,139,76,	0,109865,168781,174065,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	46918899	46994407	chr4:46918899-46994407	3	-	46928224	46993424	789624	9	9856,260,153,144,83,221,68,119,1069,	0,46070,52183,55332,58161,58510,60131,73928,74439,
#Partially deleted in new
chr4	46928126	46993505	chr4:46928126-46993505	0	-	46992853	46993424	789624	9	629,260,153,144,83,221,68,119,99,	0,36843,42956,46105,48934,49283,50904,64701,65280,
#Partially deleted in new
chr4	46928126	46993505	chr4:46928126-46993505	0	-	46992853	46993424	789624	8	629,260,144,83,221,68,119,99,	0,36843,46105,48934,49283,50904,64701,65280,
#Partially deleted in new
chr4	46971082	46993540	chr4:46971082-46993540	0	-	46979073	46993424	789624	6	153,144,83,221,68,202,	0,3149,5978,6327,7948,22256,
#Deleted in new
chr4	46992669	46993548	chr4:46992669-46993548	0	-	46992669	46992669	8553170	2	277,210,	0,669,
#Partially deleted in new
chr4	46993722	47161460	chr4:46993722-47161460	0	+	47031932	47161460	789624	4	204,92,68,212,	0,38191,38694,167526,
#Partially deleted in new
chr4	47031359	47426444	chr4:47031359-47426444	3	+	47031651	47426018	789624	9	372,92,68,221,83,138,153,245,771,	0,554,1057,129889,288767,371958,372199,375322,394314,
#Partially deleted in new
chr4	47031550	47043345	chr4:47031550-47043345	0	+	47031550	47031550	8553170	4	181,92,68,264,	0,363,866,11531,
#Deleted in new
chr4	47031580	47033013	chr4:47031580-47033013	0	+	47031580	47031580	8553170	3	151,92,597,	0,333,836,
#Partially deleted in new
chr4	47031632	47403385	chr4:47031632-47403385	0	+	47031651	47161340	789624	5	99,92,221,83,68,	0,281,129616,288494,371685,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	47431959	47438959	chr4:47431959-47438959	3	+	47431959	47431959	8553170	1	7000,	0,
#Partially deleted in new
chr4	47450795	47463719	chr4:47450795-47463719	3	-	47451644	47463651	789624	5	870,156,153,156,134,	0,2263,5781,9348,12790,
#Partially deleted in new
chr4	47459846	47463665	chr4:47459846-47463665	0	-	47459846	47459846	8553170	2	453,80,	0,3739,
#Partially deleted in new
chr4	47463783	47470477	chr4:47463783-47470477	3	+	47463783	47463783	8553170	3	252,108,405,	0,3732,6289,
#Partially deleted in new
chr4	47463816	47470415	chr4:47463816-47470415	0	+	47463816	47463816	8553170	3	135,135,343,	0,3672,6256,
#Partially deleted in new
chr4	47469188	47470434	chr4:47469188-47470434	0	+	47469188	47469188	8553170	2	140,362,	0,884,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr4	47485287	47593486	chr4:47485287-47593486	3	+	47512540	47591381	789624	23	232,327,195,205,86,107,132,128,253,239,189,610,107,127,185,310,77,126,201,81,105,188,2445,	0,27216,30188,37724,40269,50221,50614,51149,51398,61336,69438,72376,73635,75661,78293,83549,86866,87584,91485,95110,96672,101731,105754,
#Partially deleted in new
chr4	47485296	47512846	chr4:47485296-47512846	0	+	47485296	47485296	8553170	2	223,343,	0,27207,
#Partially deleted in new
chr4	47485298	47547564	chr4:47485298-47547564	1	+	47512540	47546880	789624	10	221,327,195,205,86,107,132,128,208,941,	0,27205,30177,37713,40258,50210,50603,51138,51432,61325,
#Deleted in new
chr4	47490966	47491471	chr4:47490966-47491471	7	-	47490966	47490966	16724991	1	505,	0,
#Partially deleted in new
chr4	47536479	47592891	chr4:47536479-47592891	0	+	47536479	47558157	789624	16	85,253,239,26,186,107,127,185,310,77,126,201,81,105,188,1850,	0,206,10144,18246,21608,22443,24469,27101,32357,35674,36392,40293,43918,45480,50539,54562,
#Partially deleted in new
chr4	47556730	47560259	chr4:47556730-47560259	3	-	47556730	47556730	8553170	3	273,270,58,	0,911,3471,
#Partially deleted in new
chr4	47578311	47591103	chr4:47578311-47591103	0	+	47578311	47578311	8553170	5	145,81,105,188,62,	0,2086,3648,8707,12730,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	47580398	47583315	chr4:47580398-47583315	0	+	47580398	47580398	8553170	3	80,105,447,	0,1561,2470,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	47582030	47591295	chr4:47582030-47591295	0	+	47582030	47582030	8553170	4	34,93,188,254,	0,838,4988,9011,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr4	47593997	47837949	chr4:47593997-47837949	3	-	47595720	47837949	789624	22	1906,134,272,175,50,117,130,111,114,108,146,232,108,117,111,108,114,182,208,201,145,63,	0,6216,9399,29573,29901,32407,47922,49148,51083,59555,67713,71034,80395,83940,86143,89733,98972,150404,169381,192727,212905,243889,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr4	47593998	47838106	chr4:47593998-47838106	1	-	47595720	47837949	789624	20	1905,134,272,175,50,117,130,111,114,108,146,232,108,117,108,114,182,208,145,220,	0,6215,9398,29572,29900,32406,47921,49147,51082,59554,67712,71033,80394,83939,89732,98971,150403,169380,212904,243888,
#Partially deleted in new
chr4	47595481	47790260	chr4:47595481-47790260	1	-	47595720	47763578	789624	21	422,134,272,175,50,117,130,111,114,108,146,232,108,117,111,108,114,182,208,201,40,	0,4732,7915,28089,28417,30923,46438,47664,49599,58071,66229,69550,78911,82456,84659,88249,97488,148920,167897,191243,194739,
#Partially deleted in new
chr4	47595659	47838072	chr4:47595659-47838072	1	-	47595720	47837949	789624	21	244,134,272,175,50,117,130,111,114,108,146,232,108,117,111,108,114,182,208,145,186,	0,4554,7737,27911,28239,30745,46260,47486,49421,57893,66051,69372,78733,82278,84481,88071,97310,148742,167719,211243,242227,
#Partially deleted in new
chr4	47595720	47837949	chr4:47595720-47837949	1	-	47595720	47837949	789624	21	183,134,272,175,50,117,130,111,114,108,146,232,108,117,108,114,182,208,201,145,63,	0,4493,7676,27850,28178,30684,46199,47425,49360,57832,65990,69311,78672,82217,88010,97249,148681,167658,191004,211182,242166,
#Partially deleted in new
chr4	47623583	47632452	chr4:47623583-47632452	0	-	47623583	47623583	8553170	4	162,50,89,281,	0,315,2821,8588,
#Partially deleted in new
chr4	47642840	47661860	chr4:47642840-47661860	0	-	47642840	47642840	8553170	3	416,114,150,	0,2240,18870,
#Partially deleted in new
chr4	47642842	47838106	chr4:47642842-47838106	1	-	47642897	47837949	789624	14	414,114,108,146,232,108,117,108,114,182,208,201,145,220,	0,2238,10710,18868,22189,31550,35095,40888,50127,101559,120536,143882,164060,195044,
#Deleted in new
chr4	47652668	47652743	chr4:47652668-47652743	3	+	47652668	47652668	5263520	1	75,	0,
#Partially deleted in new
chr4	47661487	47838067	chr4:47661487-47838067	0	-	47661487	47661487	8553170	11	369,232,108,117,108,114,182,208,201,145,181,	0,3544,12905,16450,22243,31482,82914,101891,125237,145415,176399,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	47679530	47838106	chr4:47679530-47838106	0	-	47679530	47679530	8553170	7	4308,114,182,208,201,145,220,	0,13439,64871,83848,107194,127372,158356,
#Deleted in new
chr4	47706371	47706987	chr4:47706371-47706987	7	+	47706371	47706371	16724991	1	616,	0,
#Partially deleted in new
chr4	47786723	47837507	chr4:47786723-47837507	0	-	47786723	47786723	8553170	3	202,145,135,	0,20179,50649,
#Partially deleted in new
chr4	47831384	47896709	chr4:47831384-47896709	3	+	47831384	47831384	789624	3	124,155,168,	0,43792,65157,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	47840121	47844339	chr4:47840121-47844339	3	-	47840121	47840121	8553170	1	4218,	0,
#Partially deleted in new
chr4	47847232	47914667	chr4:47847232-47914667	3	-	47848162	47914203	789624	23	1104,54,87,105,70,167,141,22,92,160,121,91,123,125,115,101,162,179,131,110,171,237,55,	0,3862,4623,7826,15613,27894,31292,31863,37113,38265,38646,43380,46947,49290,50734,51524,51726,52137,55960,58004,63591,66736,67380,
#Partially deleted in new
chr4	47847239	47914616	chr4:47847239-47914616	1	-	47848162	47914203	789624	23	1097,54,87,105,70,167,141,22,92,160,121,91,123,125,115,101,162,179,131,110,171,237,67,	0,3855,4616,7819,15606,27887,31285,31856,37106,38258,38639,43373,46940,49283,50727,51517,51719,52130,55953,57997,63584,66729,67310,
#Partially deleted in new
chr4	47847239	47914636	chr4:47847239-47914636	0	-	47877068	47914203	789624	24	1097,54,87,105,70,167,180,141,22,92,160,121,91,123,125,115,101,162,179,131,110,171,237,24,	0,3855,4616,7819,15606,27887,29772,31285,31856,37106,38258,38639,43373,46940,49283,50727,51517,51719,52130,55953,57997,63584,66729,67373,
#Partially deleted in new
chr4	47847239	47878704	chr4:47847239-47878704	0	-	47847239	47847239	8553170	7	1097,54,87,105,70,167,180,	0,3855,4616,7819,15606,27887,31285,
#Partially deleted in new
chr4	47847242	47914539	chr4:47847242-47914539	1	-	47848162	47914203	789624	23	1094,54,87,105,70,167,141,22,92,160,121,91,123,125,115,101,162,179,131,110,171,237,175,	0,3852,4613,7816,15603,27884,31282,31853,37103,38255,38636,43370,46937,49280,50724,51514,51716,52127,55950,57994,63581,66726,67122,
#Partially deleted in new
chr4	47848303	47914616	chr4:47848303-47914616	0	-	47848303	47848303	8553170	23	33,54,87,105,70,167,141,22,92,160,121,91,123,125,115,101,162,179,131,110,171,237,67,	0,2791,3552,6755,14542,26823,30221,30792,36042,37194,37575,42309,45876,48219,49663,50453,50655,51066,54889,56933,62520,65665,66246,
#Partially deleted in new
chr4	47851056	47877144	chr4:47851056-47877144	0	-	47851056	47851056	8553170	6	92,87,105,70,167,133,	0,799,4002,11789,24070,25955,
#Deleted in new
chr4	47851082	47852208	chr4:47851082-47852208	0	-	47851082	47851082	8553170	2	66,353,	0,773,
#Partially deleted in new
chr4	47875205	47882344	chr4:47875205-47882344	0	+	47875205	47875205	8553170	2	126,103,	0,7036,
#Partially deleted in new
chr4	47914141	48025194	chr4:47914141-48025194	0	+	47914141	47914141	8553170	2	563,127,	0,110926,
#Partially deleted in new
chr4	47914226	47959141	chr4:47914226-47959141	0	+	47914226	47914226	8553170	2	478,118,	0,44797,
#Partially deleted in new
chr4	47935978	47981502	chr4:47935978-47981502	1	-	47936420	47952701	789624	9	1851,107,108,108,42,63,117,121,110,	0,4784,6062,7202,7392,13854,15374,16604,45414,
#Partially deleted in new
chr4	47942916	47952689	chr4:47942916-47952689	0	-	47942916	47942916	8553170	5	372,42,63,117,107,	0,454,6916,8436,9666,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	47949832	47952807	chr4:47949832-47952807	0	-	47949832	47952701	789624	3	63,117,225,	0,1520,2750,
#Partially deleted in new
chr4	48016771	48035613	chr4:48016771-48035613	0	+	48016771	48016771	8553170	6	80,267,57,91,161,52,	0,8296,13348,16221,18109,18790,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	48016773	48040173	chr4:48016773-48040173	3	+	48016839	48036172	789624	6	112,267,57,91,161,4612,	0,8294,13346,16219,18107,18788,
#Partially deleted in new
chr4	48016809	48035884	chr4:48016809-48035884	0	+	48016839	48034906	789624	5	76,267,57,161,323,	0,8258,13310,18071,18752,
#Partially deleted in new
chr4	48025126	48038860	chr4:48025126-48038860	0	+	48025126	48037292	789624	4	208,57,63,160,	0,4993,12152,13574,
#Partially deleted in new
chr4	48066392	48134256	chr4:48066392-48134256	3	-	48067636	48134170	0	15	1313,158,119,65,217,172,75,128,80,55,66,206,103,55,102,	0,5124,7542,10009,13519,20073,23357,27684,28750,38508,44145,45914,46814,47955,67762,
#Partially deleted in new
chr4	48066676	48080066	chr4:48066676-48080066	0	-	48071628	48080049	789624	4	1029,158,65,155,	0,4840,9725,13235,
#Partially deleted in new
chr4	48067160	48080177	chr4:48067160-48080177	1	-	48067636	48080049	789624	5	545,158,119,65,266,	0,4356,6774,9241,12751,
#Partially deleted in new
chr4	48067387	48080178	chr4:48067387-48080178	0	-	48071665	48080049	789624	3	318,158,267,	0,4129,12524,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	48089384	48134229	chr4:48089384-48134229	0	-	48089384	48089384	8553170	9	440,128,80,55,66,206,103,55,75,	0,4692,5758,15516,21153,22922,23822,24963,44770,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	48106080	48106188	chr4:48106080-48106188	3	-	48106080	48106080	8553170	1	108,	0,
#Partially deleted in new
chr4	48110568	48114545	chr4:48110568-48114545	0	-	48110568	48114418	789624	4	35,206,103,198,	0,1738,2638,3779,
#Partially deleted in new
chr4	48135782	48269864	chr4:48135782-48269864	3	-	48137415	48228614	0	18	1717,158,119,65,217,172,75,134,80,55,66,176,41,129,82,105,183,113,	0,2882,3121,5572,9296,9625,10542,13774,15080,20897,27919,31995,32803,34465,35585,40299,92694,133969,
#Partially deleted in new
chr4	48136803	48228659	chr4:48136803-48228659	0	-	48170357	48228614	789624	16	696,158,119,65,217,172,75,134,80,55,176,41,129,41,105,183,	0,1861,2100,4551,8275,8604,9521,12753,14059,19876,30974,31782,33444,34564,39278,91673,
#Partially deleted in new
chr4	48137409	48146401	chr4:48137409-48146401	0	-	48141400	48145544	789624	6	90,158,119,65,172,77,	0,1255,1494,3945,7998,8915,
#Partially deleted in new
chr4	48138915	48141683	chr4:48138915-48141683	0	-	48138915	48138915	8553170	2	107,329,	0,2439,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	48141355	48155866	chr4:48141355-48155866	0	-	48141355	48141355	8553170	7	64,217,172,75,129,80,77,	0,3723,4052,4969,8201,9507,14434,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	48153433	48153535	chr4:48153433-48153535	3	+	48153433	48153433	8553170	1	102,	0,
#Partially deleted in new
chr4	48341321	48426212	chr4:48341321-48426212	3	+	48341739	48422077	0	8	807,149,165,159,360,138,319,4202,	0,28527,36574,38368,41246,42325,78803,80689,
#Partially deleted in new
chr4	48369848	48379724	chr4:48369848-48379724	0	+	48369848	48369848	8553170	3	149,165,35,	0,8047,9841,
#Partially deleted in new
chr4	48377900	48425015	chr4:48377900-48425015	1	+	48377936	48422077	789624	7	160,159,360,138,78,319,3005,	0,1789,4667,5746,16675,42224,44110,
#Partially deleted in new
chr4	48379826	48394630	chr4:48379826-48394630	0	+	48379835	48382819	789624	6	22,72,200,138,101,55,	0,2741,2901,3820,7539,14749,
#Partially deleted in new
chr4	48383677	48420489	chr4:48383677-48420489	0	+	48383677	48420447	789624	3	107,78,365,	0,10898,36447,
#Partially deleted in new
chr4	48483342	48489196	chr4:48483342-48489196	3	+	48483561	48488939	789624	3	809,211,770,	0,1589,5084,
#Partially deleted in new
chr4	48490251	48494389	chr4:48490251-48494389	3	+	48490291	48494244	789624	4	1003,93,75,289,	0,2514,2686,3849,
#Partially deleted in new
chr4	48497360	48634410	chr4:48497360-48634410	1	-	48499421	48634410	789624	61	2320,191,111,18,69,99,150,208,248,168,204,177,75,162,198,141,171,98,608,95,191,122,205,186,104,151,113,85,169,141,260,169,100,155,111,161,173,92,58,125,193,269,87,186,238,108,133,172,87,109,104,102,99,93,169,81,80,97,140,54,120,	0,2669,4262,5467,8186,12698,13474,15120,17667,23687,25540,30116,30610,30814,33795,37184,38296,42610,42992,44666,46446,47422,48706,50223,51329,52112,53231,54133,55854,59617,60092,64107,65528,66587,67572,68170,69887,73466,75825,77756,78669,81612,83504,84059,85136,89260,92384,93298,96569,98229,98536,104659,105929,108380,109077,111626,112383,121913,123278,125765,136930,
#Partially deleted in new
chr4	48497362	48780299	chr4:48497362-48780299	3	-	48499421	48634410	789624	64	2318,191,111,18,69,99,150,208,248,168,204,177,75,162,198,141,171,98,608,95,191,122,205,186,104,151,113,85,169,141,260,169,100,155,111,161,173,92,58,125,193,269,87,186,238,108,133,172,87,109,104,102,99,93,169,81,80,97,140,54,200,123,180,222,	0,2667,4260,5465,8184,12696,13472,15118,17665,23685,25538,30114,30608,30812,33793,37182,38294,42608,42990,44664,46444,47420,48704,50221,51327,52110,53229,54131,55852,59615,60090,64105,65526,66585,67570,68168,69885,73464,75823,77754,78667,81610,83502,84057,85134,89258,92382,93296,96567,98227,98534,104657,105927,108378,109075,111624,112381,121911,123276,125763,136928,187310,213156,282715,
#Partially deleted in new
chr4	48497540	48557703	chr4:48497540-48557703	0	-	48499421	48557703	789624	30	2140,191,111,69,99,150,208,248,168,204,177,75,162,198,141,171,98,608,95,191,122,205,186,104,151,113,85,169,141,251,	0,2489,4082,8006,12518,13294,14940,17487,23507,25360,29936,30430,30634,33615,37004,38116,42430,42812,44486,46266,47242,48526,50043,51149,51932,53051,53953,55674,59437,59912,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	48497566	48506612	chr4:48497566-48506612	0	-	48497566	48497566	8553170	4	2114,191,111,1066,	0,2463,4056,7980,
#Partially deleted in new
chr4	48498545	48553288	chr4:48498545-48553288	0	-	48499421	48553288	789624	30	1135,191,111,18,69,99,150,208,248,168,204,9,177,75,162,198,141,171,98,608,95,191,122,205,186,104,151,113,85,74,	0,1484,3077,4282,7001,11513,12289,13935,16482,22502,24355,24942,28931,29425,29629,32610,35999,37111,41425,41807,43481,45261,46237,47521,49038,50144,50927,52046,52948,54669,
#Partially deleted in new
chr4	48499253	48520685	chr4:48499253-48520685	0	-	48499253	48499253	8553170	9	427,191,111,69,99,150,208,248,162,	0,776,2369,6293,10805,11581,13227,15774,21270,
#Partially deleted in new
chr4	48515208	48564984	chr4:48515208-48564984	0	-	48515208	48564984	789624	27	67,168,204,177,75,162,198,141,171,98,608,95,191,122,202,186,104,151,113,85,169,141,260,169,100,155,52,	0,5839,7692,12268,12762,12966,15947,19336,20448,24762,25144,26818,28598,29574,30858,32375,33481,34264,35383,36285,38006,41769,42244,46259,47680,48739,49724,
#Partially deleted in new
chr4	48521093	48546759	chr4:48521093-48546759	0	-	48521093	48521093	8553170	14	122,204,177,75,162,198,141,171,98,608,95,191,122,693,	0,1807,6383,6877,7081,10062,13451,14563,18877,19259,20933,22713,23689,24973,
#Partially deleted in new
chr4	48531300	48540535	chr4:48531300-48540535	0	-	48531300	48531300	8553170	4	53,141,171,183,	0,3244,4356,9052,
#Partially deleted in new
chr4	48547469	48551568	chr4:48547469-48551568	0	-	48547469	48547469	8553170	5	300,104,151,113,75,	0,1220,2003,3122,4024,
#Partially deleted in new
chr4	48550501	48780248	chr4:48550501-48780248	1	-	48550562	48634410	789624	38	203,85,169,141,260,169,100,155,111,161,173,92,58,125,193,269,87,186,238,108,133,172,87,109,104,102,99,93,169,81,80,97,140,54,200,123,180,171,	0,992,2713,6476,6951,10966,12387,13446,14431,15029,16746,20325,22684,24615,25528,28471,30363,30918,31995,36119,39243,40157,43428,45088,45395,51518,52788,55239,55936,58485,59242,68772,70137,72624,83789,134171,160017,229576,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	48570826	48571897	chr4:48570826-48571897	0	-	48570826	48570826	8553170	2	92,208,	0,863,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	48574452	48574520	chr4:48574452-48574520	3	-	48574452	48574452	8553170	1	68,	0,
#Partially deleted in new
chr4	48580455	48605846	chr4:48580455-48605846	1	-	48580825	48603340	789624	12	496,186,238,108,133,172,87,109,104,102,99,106,	0,964,2041,6165,9289,10203,13474,15134,15441,21564,22834,25285,
#Partially deleted in new
chr4	48617603	48653917	chr4:48617603-48653917	0	-	48617603	48617603	8553170	5	1767,140,54,200,204,	0,3035,5522,16687,36110,
#Partially deleted in new
chr4	48620656	48681171	chr4:48620656-48681171	0	-	48620656	48681125	789624	4	122,54,200,242,	0,2469,13634,60273,
#Partially deleted in new
chr4	48634417	48780322	chr4:48634417-48780322	0	-	48634417	48634417	8553170	3	73,123,245,	0,50255,145660,
#Partially deleted in new
chr4	48634417	48780267	chr4:48634417-48780267	0	-	48634417	48634417	8553170	3	73,180,190,	0,76101,145660,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	48636849	48780271	chr4:48636849-48780271	0	-	48636849	48636849	8553170	3	1714,123,194,	0,47823,143228,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	48638188	48780271	chr4:48638188-48780271	0	-	48638188	48638188	8553170	3	375,123,194,	0,46484,141889,
#Partially deleted in new
chr4	48645968	48780129	chr4:48645968-48780129	0	-	48645968	48645968	8553170	5	49,123,180,61,52,	0,38704,64550,81462,134109,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	48805211	48850036	chr4:48805211-48850036	0	+	48832624	48850036	789624	7	119,97,63,81,54,48,90,	0,25365,27408,28189,37424,43187,44735,
#Partially deleted in new
chr4	48830997	48861249	chr4:48830997-48861249	1	+	48832624	48860762	789624	8	55,63,54,48,136,170,153,525,	0,1622,11638,17401,18949,20808,26215,29727,
#Partially deleted in new
chr4	48831008	48857252	chr4:48831008-48857252	0	+	48832624	48857252	789624	7	44,63,54,48,136,170,40,	0,1611,11627,17390,18938,20797,26204,
#Partially deleted in new
chr4	48831008	48848424	chr4:48831008-48848424	0	+	48832624	48848424	789624	6	44,270,63,81,54,26,	0,218,1611,2392,11627,17390,
#Partially deleted in new
chr4	48831043	48850083	chr4:48831043-48850083	0	+	48832624	48850041	789624	7	98,172,63,81,54,48,137,	0,183,1576,2357,11592,17355,18903,
#Partially deleted in new
chr4	48831058	48852504	chr4:48831058-48852504	0	+	48831058	48831058	8553170	6	191,81,54,48,136,699,	0,2342,11577,17340,18888,20747,
#Partially deleted in new
chr4	48831062	48849996	chr4:48831062-48849996	0	+	48832624	48849996	789624	7	79,207,63,81,54,48,50,	0,164,1557,2338,11573,17336,18884,
#Partially deleted in new
chr4	48831062	48848446	chr4:48831062-48848446	0	+	48832624	48848446	789624	6	79,23,63,81,54,48,	0,164,1557,2338,11573,17336,
#Partially deleted in new
chr4	48831062	48833429	chr4:48831062-48833429	0	+	48832624	48833429	789624	4	79,270,63,29,	0,164,1557,2338,
#Partially deleted in new
chr4	48831064	48861248	chr4:48831064-48861248	3	+	48832624	48860762	789624	9	185,63,81,54,48,136,170,153,524,	0,1555,2336,11571,17334,18882,20741,26148,29660,
#Partially deleted in new
chr4	48831064	48861248	chr4:48831064-48861248	1	+	48832624	48851992	789624	8	185,63,81,54,48,136,215,524,	0,1555,2336,11571,17334,18882,20741,29660,
#Partially deleted in new
chr4	48831065	48851941	chr4:48831065-48851941	0	+	48832624	48851941	789624	7	76,63,81,54,48,136,136,	0,1554,2335,11570,17333,18881,20740,
#Partially deleted in new
chr4	48831081	48848446	chr4:48831081-48848446	0	+	48832624	48848446	789624	5	317,63,81,54,48,	0,1538,2319,11554,17317,
#Partially deleted in new
chr4	48831083	48861200	chr4:48831083-48861200	1	+	48832624	48860762	789624	9	413,63,81,54,48,136,170,153,476,	0,1536,2317,11552,17315,18863,20722,26129,29641,
#Partially deleted in new
chr4	48831083	48851945	chr4:48831083-48851945	0	+	48832624	48851945	789624	7	166,63,81,54,48,136,140,	0,1536,2317,11552,17315,18863,20722,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	48831107	48861786	chr4:48831107-48861786	1	+	48832624	48860762	789624	8	142,63,81,54,48,136,170,1062,	0,1512,2293,11528,17291,18839,20698,29617,
#Partially deleted in new
chr4	48831117	48849996	chr4:48831117-48849996	0	+	48832624	48849996	789624	6	136,63,81,54,48,50,	0,1502,2283,11518,17281,18829,
#Partially deleted in new
chr4	48831136	48851949	chr4:48831136-48851949	0	+	48842658	48851949	789624	5	113,54,48,136,144,	0,11499,17262,18810,20669,
#Partially deleted in new
chr4	48831152	48860790	chr4:48831152-48860790	1	+	48842658	48860762	789624	6	97,54,48,136,170,66,	0,11483,17246,18794,20653,29572,
#Partially deleted in new
chr4	48831171	48857365	chr4:48831171-48857365	0	+	48842658	48857365	789624	7	78,81,54,48,136,170,153,	0,2229,11464,17227,18775,20634,26041,
#Partially deleted in new
chr4	48831222	48848669	chr4:48831222-48848669	0	+	48831222	48831222	8553170	5	27,63,81,54,271,	0,1397,2178,11413,17176,
#Partially deleted in new
chr4	48831222	48851899	chr4:48831222-48851899	0	+	48842658	48851899	789624	7	27,142,81,54,48,136,94,	0,1397,2178,11413,17176,18724,20583,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	48831222	48848410	chr4:48831222-48848410	0	+	48832624	48837161	789624	6	274,63,81,93,54,12,	0,1397,2178,5937,11413,17176,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	48831226	48861817	chr4:48831226-48861817	1	+	48832624	48860762	789624	8	270,63,81,54,48,136,170,1093,	0,1393,2174,11409,17172,18720,20579,29498,
#Partially deleted in new
chr4	48831305	48861216	chr4:48831305-48861216	1	+	48832624	48860762	789624	9	226,63,81,54,48,136,170,153,492,	0,1314,2095,11330,17093,18641,20500,25907,29419,
#Partially deleted in new
chr4	48831341	48861250	chr4:48831341-48861250	1	+	48832624	48860762	789624	9	57,63,81,54,48,136,170,153,526,	0,1278,2059,11294,17057,18605,20464,25871,29383,
#Partially deleted in new
chr4	48852007	48860203	chr4:48852007-48860203	3	-	48852007	48852007	789624	2	218,47,	0,8149,
#Partially deleted in new
chr4	48852191	48860859	chr4:48852191-48860859	0	+	48852191	48852191	8553170	2	313,135,	0,8533,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	48855971	48861246	chr4:48855971-48861246	0	+	48855971	48855971	8553170	2	1394,522,	0,4753,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	48885018	48906828	chr4:48885018-48906828	3	-	48885483	48904549	789624	7	547,118,48,54,97,128,171,	0,7753,8987,12785,14810,19465,21639,
#Partially deleted in new
chr4	48885381	48906937	chr4:48885381-48906937	0	-	48885381	48885381	8553170	6	184,118,48,54,128,280,	0,7390,8624,12422,19102,21276,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	48885381	48906798	chr4:48885381-48906798	0	-	48885381	48885381	8553170	6	184,1282,54,97,128,141,	0,7390,12422,14447,19102,21276,
#Partially deleted in new
chr4	48885387	48906788	chr4:48885387-48906788	1	-	48885530	48904549	789624	6	178,48,54,97,128,131,	0,8618,12416,14441,19096,21270,
#Partially deleted in new
chr4	48885389	48906828	chr4:48885389-48906828	1	-	48885530	48904549	789624	6	176,48,54,97,151,171,	0,8616,12414,14439,19094,21268,
#Partially deleted in new
chr4	48885399	48906774	chr4:48885399-48906774	0	-	48885399	48885399	789624	4	166,48,128,117,	0,8606,19084,21258,
#Partially deleted in new
chr4	48885404	48906757	chr4:48885404-48906757	0	-	48894005	48904549	789624	6	161,48,54,97,151,100,	0,8601,12399,14424,19079,21253,
#Partially deleted in new
chr4	48892770	48897203	chr4:48892770-48897203	0	-	48892770	48892770	8553170	3	119,48,50,	0,1235,4383,
#Partially deleted in new
chr4	48892832	48906727	chr4:48892832-48906727	0	-	48897812	48904549	789624	6	57,48,32,97,128,70,	0,1173,4971,6996,11651,13825,
#Partially deleted in new
chr4	48897165	48897848	chr4:48897165-48897848	0	-	48897165	48897165	8553170	2	59,45,	0,638,
#Deleted in new
chr4	48932754	48932854	chr4:48932754-48932854	3	-	48932754	48932754	8553170	1	100,	0,
#Deleted in new
chr4	48936581	48936880	chr4:48936581-48936880	7	+	48936581	48936581	16724991	1	299,	0,
#Partially deleted in new
chr4	48986246	49062079	chr4:48986246-49062079	3	+	48986429	49061890	789624	16	226,192,121,155,202,89,258,126,80,106,136,150,145,62,156,268,	0,2230,5207,5689,8372,12213,17488,20954,31002,42382,44578,46319,51789,58539,64447,75565,
#Partially deleted in new
chr4	48986312	49062081	chr4:48986312-49062081	0	+	48986429	48994824	789624	14	160,192,121,155,206,196,80,106,136,150,145,62,156,270,	0,2164,5141,5623,8306,20818,30936,42316,44512,46253,51723,58473,64381,75499,
#Partially deleted in new
chr4	48986638	49062076	chr4:48986638-49062076	1	+	48988514	49061890	789624	16	147,192,121,155,202,89,258,126,80,106,136,150,145,62,156,265,	0,1838,4815,5297,7980,11821,17096,20562,30610,41990,44186,45927,51397,58147,64055,75173,
#Partially deleted in new
chr4	49003608	49017329	chr4:49003608-49017329	0	+	49003608	49003608	8553170	3	384,126,81,	0,3592,13640,
#Deleted in new
chr4	49016681	49017154	chr4:49016681-49017154	7	-	49016681	49016681	16724991	1	473,	0,
#Partially deleted in new
chr4	49028691	49031276	chr4:49028691-49031276	0	+	49028691	49028691	8553170	2	43,452,	0,2133,
#Partially deleted in new
chr4	49203170	49203726	chr4:49203170-49203726	7	-	49203170	49203170	16724991	1	556,	0,
#Partially deleted in new
chr4	49212250	49212624	chr4:49212250-49212624	7	-	49212250	49212250	16724991	1	374,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	49229572	49231284	chr4:49229572-49231284	3	+	49229572	49229572	8553170	1	1712,	0,
#Deleted in new
chr4	49233288	49233965	chr4:49233288-49233965	7	-	49233288	49233288	16724991	1	677,	0,
#Partially deleted in new
chr4	49238031	49245419	chr4:49238031-49245419	7	-	49238031	49238031	16724991	4	42,226,212,285,	0,4674,6241,7103,
#Deleted in new
chr4	49246020	49246538	chr4:49246020-49246538	7	+	49246020	49246020	16724991	1	518,	0,
#Deleted in new
chr4	49246600	49246915	chr4:49246600-49246915	7	+	49246600	49246600	16724991	2	93,150,	0,165,
#Deleted in new
chr4	49486925	49489554	chr4:49486925-49489554	7	-	49486925	49486925	16724991	3	171,214,285,	0,1508,2344,
#Partially deleted in new
chr4	49502144	49506022	chr4:49502144-49506022	7	-	49502144	49502144	16724991	3	971,195,164,	0,2132,3714,
#Partially deleted in new
chr4	49507763	49508806	chr4:49507763-49508806	7	-	49507763	49507763	16724991	3	72,126,572,	0,156,471,
#Deleted in new
chr4	49523647	49523857	chr4:49523647-49523857	7	-	49523647	49523647	16724991	1	210,	0,
#Deleted in new
chr4	49524029	49524185	chr4:49524029-49524185	7	-	49524029	49524029	16724991	1	156,	0,
#Deleted in new
chr4	49548563	49548855	chr4:49548563-49548855	7	-	49548563	49548563	16724991	2	150,95,	0,197,
#Deleted in new
chr4	49548917	49549435	chr4:49548917-49549435	7	-	49548917	49548917	16724991	1	518,	0,
#Partially deleted in new
chr4	49550031	49557400	chr4:49550031-49557400	7	+	49550031	49550031	16724991	4	285,210,225,45,	0,921,2473,7324,
#Deleted in new
chr4	49561284	49561470	chr4:49561284-49561470	7	-	49561284	49561284	16724991	1	186,	0,
#Deleted in new
chr4	49561478	49562149	chr4:49561478-49562149	7	+	49561478	49561478	16724991	1	671,	0,
#Deleted in new
chr4	49579832	49580189	chr4:49579832-49580189	7	+	49579832	49579832	16724991	1	357,	0,
#Deleted in new
chr4	49588771	49589529	chr4:49588771-49589529	7	+	49588771	49588771	16724991	1	758,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	51842999	51914294	chr4:51842999-51914294	0	+	51843242	51874315	789624	9	268,71,115,92,677,92,109,103,766,	0,20437,31271,34763,43568,48760,56270,70290,70529,
#Partially deleted in new
chr4	51843060	51877972	chr4:51843060-51877972	0	+	51843060	51843060	8553170	5	207,71,40,115,210,	0,20376,20609,31210,34702,
#Partially deleted in new
chr4	51843062	51916837	chr4:51843062-51916837	3	+	51843242	51913584	0	11	205,71,40,115,92,71,92,109,105,103,3309,	0,20374,20607,31208,34700,43505,48697,56207,68007,70227,70466,
#Partially deleted in new
chr4	51843062	51916837	chr4:51843062-51916837	1	+	51843242	51913584	0	10	205,71,40,115,92,71,92,109,103,3309,	0,20374,20607,31208,34700,43505,48697,56207,70227,70466,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	51843102	51877798	chr4:51843102-51877798	0	+	51843242	51863482	789624	6	165,121,71,40,115,36,	0,17440,20334,20567,31168,34660,
#Partially deleted in new
chr4	51843132	51891823	chr4:51843132-51891823	0	+	51843242	51874315	789624	6	135,71,115,92,71,64,	0,20304,31138,34630,43435,48627,
#Partially deleted in new
chr4	51843152	51914036	chr4:51843152-51914036	0	+	51843242	51848254	789624	12	115,163,71,40,115,92,71,92,109,105,103,508,	0,5052,20284,20517,31118,34610,43415,48607,56117,67917,70137,70376,
#Partially deleted in new
chr4	51843152	51875328	chr4:51843152-51875328	0	+	51843152	51843152	8553170	5	115,71,40,115,608,	0,20284,20517,31118,31568,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	51843196	51916837	chr4:51843196-51916837	0	+	51843242	51886656	789624	12	71,71,40,115,92,677,92,109,56,105,103,3309,	0,20240,20473,31074,34566,43371,48563,56073,65723,67873,70093,70332,
#Partially deleted in new
chr4	51843578	51916835	chr4:51843578-51916835	1	+	51843585	51913584	0	11	164,71,40,115,92,71,92,109,105,103,3307,	0,19858,20091,30692,34184,42989,48181,55691,67491,69711,69950,
#Partially deleted in new
chr4	51843578	51891851	chr4:51843578-51891851	0	+	51843585	51891851	789624	7	164,71,40,115,92,71,92,	0,19858,20091,30692,34184,42989,48181,
#Partially deleted in new
chr4	51844883	51874367	chr4:51844883-51874367	0	+	51844883	51844883	8553170	4	360,71,40,97,	0,18553,18786,29387,
#Deleted in new
chr4	51865049	51865535	chr4:51865049-51865535	7	-	51865049	51865049	16724991	1	486,	0,
#Partially deleted in new
chr4	51877455	51891851	chr4:51877455-51891851	0	+	51877455	51877455	8553170	3	399,71,92,	0,9112,14304,
#Partially deleted in new
chr4	51884325	51911114	chr4:51884325-51911114	0	+	51884325	51884325	8553170	5	158,71,92,109,45,	0,2242,7434,14944,26744,
#Partially deleted in new
chr4	51884910	51913642	chr4:51884910-51913642	0	+	51884910	51884910	8553170	6	49,71,109,105,103,114,	0,1657,14359,26159,28379,28618,
#Partially deleted in new
chr4	51891806	51913835	chr4:51891806-51913835	0	+	51891806	51913584	789624	4	45,105,103,307,	0,19263,21483,21722,
#Partially deleted in new
chr4	51899336	51913723	chr4:51899336-51913723	0	+	51899336	51905212	789624	5	42,132,105,103,195,	0,5852,11733,13953,14192,
#Deleted in new
chr4	51909399	51914102	chr4:51909399-51914102	0	+	51909399	51909399	8553170	4	53,105,103,574,	0,1670,3890,4129,
#Deleted in new
chr4	51910752	51913392	chr4:51910752-51913392	0	+	51910752	51910752	8553170	2	422,103,	0,2537,
#Deleted in new
chr4	51918771	51919381	chr4:51918771-51919381	3	+	51918771	51918771	8553170	1	610,	0,
#Deleted in new
chr4	51978078	51978372	chr4:51978078-51978372	7	-	51978078	51978078	16724991	1	294,	0,
#Partially deleted in new
chr4	51993701	52017620	chr4:51993701-52017620	3	-	51994378	52017613	789624	4	2464,190,170,503,	0,4046,9521,23416,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	52020705	52038482	chr4:52020705-52038482	3	-	52023956	52038259	789624	6	3455,132,192,186,210,256,	0,7262,8024,8972,12725,17521,
#Partially deleted in new
chr4	52028770	52038245	chr4:52028770-52038245	0	-	52031889	52038245	789624	5	151,186,97,210,19,	0,907,3094,4660,9456,
#Partially deleted in new
chr4	52028828	52033640	chr4:52028828-52033640	0	-	52031889	52033640	789624	4	93,186,110,210,	0,849,3023,4602,
#Partially deleted in new
chr4	52044804	52046954	chr4:52044804-52046954	3	+	52044804	52044804	789624	3	231,105,276,	0,1220,1874,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	52051330	52097292	chr4:52051330-52097292	3	+	52051704	52094887	789624	13	461,106,116,113,96,240,262,159,176,124,84,46,2413,	0,9088,9451,10889,18490,20586,25448,27404,28413,31056,33585,43196,43549,
#Partially deleted in new
chr4	52051408	52076946	chr4:52051408-52076946	0	+	52051408	52051408	8553170	2	383,168,	0,25370,
#Partially deleted in new
chr4	52051411	52072156	chr4:52051411-52072156	0	+	52051411	52051411	8553170	2	380,240,	0,20505,
#Partially deleted in new
chr4	52051415	52095893	chr4:52051415-52095893	1	+	52051704	52094887	789624	12	376,106,116,113,240,262,159,176,124,84,46,1014,	0,9003,9366,10804,20501,25363,27319,28328,30971,33500,43111,43464,
#Partially deleted in new
chr4	52051415	52072013	chr4:52051415-52072013	0	+	52051704	52069829	789624	3	376,96,97,	0,18405,20501,
#Partially deleted in new
chr4	52051418	52082664	chr4:52051418-52082664	0	+	52051418	52051418	8553170	10	373,106,116,113,96,240,262,159,176,278,	0,9000,9363,10801,18402,20498,25360,27316,28325,30968,
#Partially deleted in new
chr4	52051460	52062324	chr4:52051460-52062324	0	+	52051704	52062283	789624	3	331,116,105,	0,9321,10759,
#Partially deleted in new
chr4	52051460	52094887	chr4:52051460-52094887	0	+	52051704	52084937	789624	13	331,106,116,113,96,240,262,159,176,174,84,46,8,	0,8958,9321,10759,18360,20456,25318,27274,28283,30926,33455,43066,43419,
#Partially deleted in new
chr4	52051541	52072032	chr4:52051541-52072032	0	+	52051704	52071922	789624	4	250,106,116,116,	0,8877,9240,20375,
#Partially deleted in new
chr4	52078343	52079900	chr4:52078343-52079900	0	+	52078343	52078343	8553170	2	550,157,	0,1400,
#Deleted in new
chr4	52440493	52441535	chr4:52440493-52441535	7	-	52440493	52440493	16724991	1	1042,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	52494848	52494952	chr4:52494848-52494952	3	+	52494848	52494848	8553170	1	104,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	52590971	52659335	chr4:52590971-52659335	3	-	52597639	52659150	0	9	6770,79,198,84,77,230,214,81,221,	0,7656,10885,13529,19569,35046,36978,40092,68143,
#Partially deleted in new
chr4	52594177	52659290	chr4:52594177-52659290	1	-	52597639	52659150	789624	8	3564,79,198,84,77,230,214,176,	0,4450,7679,10323,16363,31840,33772,64937,
#Partially deleted in new
chr4	52596813	52659275	chr4:52596813-52659275	0	-	52658194	52659150	789624	11	928,79,198,84,77,230,214,81,277,108,161,	0,1814,5043,7687,13727,29204,31136,34250,59482,61360,62301,
#Partially deleted in new
chr4	52597466	52659298	chr4:52597466-52659298	0	-	52658194	52659150	789624	10	275,138,198,84,77,230,214,81,108,184,	0,1102,4390,7034,13074,28551,30483,33597,60707,61648,
#Partially deleted in new
chr4	52597580	52656590	chr4:52597580-52656590	1	-	52597639	52656310	0	9	161,79,198,84,77,230,214,81,295,	0,1047,4276,6920,12960,28437,30369,33483,58715,
#Partially deleted in new
chr4	52626092	52628366	chr4:52626092-52628366	0	-	52626092	52626092	8553170	2	155,417,	0,1857,
#Partially deleted in new
chr4	52626127	52656573	chr4:52626127-52656573	0	-	52626127	52626127	8553170	4	120,214,81,121,	0,1822,4936,30325,
#Partially deleted in new
chr4	52628060	52656526	chr4:52628060-52656526	0	-	52628140	52656310	789624	4	103,52,81,231,	0,1573,3003,28235,
#Partially deleted in new
chr4	52659405	52661668	chr4:52659405-52661668	3	+	52659405	52659405	789624	2	271,777,	0,1486,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	52680608	52692649	chr4:52680608-52692649	3	+	52680608	52680608	8553170	3	53,72,1616,	0,4864,10425,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	52712403	52714137	chr4:52712403-52714137	1	+	52712403	52712403	789624	3	124,136,644,	0,420,1090,
#Deleted in new
chr4	52712497	52713129	chr4:52712497-52713129	0	+	52712497	52712497	8553170	2	30,306,	0,326,
#Deleted in new
chr4	52712681	52712747	chr4:52712681-52712747	3	+	52712681	52712681	5263520	1	66,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	52712780	52714137	chr4:52712780-52714137	0	+	52712780	52712780	8553170	2	179,644,	0,713,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	52712823	52720351	chr4:52712823-52720351	3	+	52712823	52712823	8553170	4	136,49,40,484,	0,670,1375,7044,
#Deleted in new
chr4	52713248	52713370	chr4:52713248-52713370	3	+	52713248	52713248	789624	1	122,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	52713638	52714882	chr4:52713638-52714882	1	+	52713638	52713638	8553170	2	64,684,	0,560,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	52720080	52720831	chr4:52720080-52720831	7	-	52720080	52720080	16724991	1	751,	0,
#Partially deleted in new
chr4	52722617	52751586	chr4:52722617-52751586	0	-	52722617	52722617	8553170	3	127,140,244,	0,28312,28725,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	52742551	52751640	chr4:52742551-52751640	3	-	52743828	52745520	789624	3	3392,140,298,	0,8378,8791,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	52743516	52751399	chr4:52743516-52751399	1	-	52743828	52745520	789624	4	2427,120,140,57,	0,7193,7413,7826,
#Deleted in new
chr4	52748136	52748259	chr4:52748136-52748259	3	+	52748136	52748136	8553170	1	123,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	52786536	52786638	chr4:52786536-52786638	3	+	52786536	52786536	8553170	1	102,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	52789993	52815464	chr4:52789993-52815464	3	+	52789993	52789993	789624	5	48,127,146,94,312,	0,971,2055,9585,25159,
#Deleted in new
chr4	52862289	52866835	chr4:52862289-52866835	3	+	52862507	52865805	789624	4	360,57,77,1501,	0,978,2188,3045,
#Deleted in new
chr4	52862331	52863610	chr4:52862331-52863610	0	+	52862331	52862331	8553170	2	318,343,	0,936,
#Deleted in new
chr4	52864145	52866799	chr4:52864145-52866799	0	+	52864145	52864145	8553170	3	191,77,1465,	0,332,1189,
#Partially deleted in new
chr4	52872981	53366075	chr4:52872981-53366075	3	-	52873968	53365941	789624	9	1080,120,135,146,250,176,128,169,972,	0,12765,34475,47743,272351,400844,440654,479616,492122,
#Partially deleted in new
chr4	52873787	53366061	chr4:52873787-53366061	1	-	52873968	53365941	789624	8	274,120,146,250,176,128,169,958,	0,11959,46937,271545,400038,439848,478810,491316,
#Deleted in new
chr4	52945648	52951022	chr4:52945648-52951022	1	+	52945648	52945648	8553170	3	112,270,2135,	0,2634,3239,
#Deleted in new
chr4	52945665	52948752	chr4:52945665-52948752	0	+	52945665	52945665	8553170	2	95,473,	0,2614,
#Partially deleted in new
chr4	52945688	52958087	chr4:52945688-52958087	3	+	52945688	52945688	8553170	3	72,273,2120,	0,2591,10279,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	53265460	53265567	chr4:53265460-53265567	3	-	53265460	53265460	8553170	1	107,	0,
#Partially deleted in new
chr4	53273578	53365941	chr4:53273578-53365941	1	-	53273578	53365941	789624	5	9,176,128,169,838,	0,247,40057,79019,91525,
#Partially deleted in new
chr4	53352597	53366066	chr4:53352597-53366066	0	-	53352597	53352683	789624	3	169,292,68,	0,12506,13401,
#Partially deleted in new
chr4	53377642	53390597	chr4:53377642-53390597	0	+	53377642	53377642	8553170	7	193,45,40,58,104,65,77,	0,1430,1582,4635,6130,12166,12878,
#Partially deleted in new
chr4	53377644	53459668	chr4:53377644-53459668	3	+	53377838	53459449	789624	18	279,45,40,58,104,65,108,131,69,110,108,94,157,55,56,214,138,367,	0,1428,1580,4633,6128,12164,12876,13364,13785,22085,36970,48227,50382,65008,66403,75275,81008,81657,
#Partially deleted in new
chr4	53377644	53459668	chr4:53377644-53459668	1	+	53377838	53459449	789624	18	279,40,58,104,65,108,131,69,110,108,94,157,27,55,56,214,138,367,	0,1580,4633,6128,12164,12876,13364,13785,22085,36970,48227,50382,62937,65008,66403,75275,81008,81657,
#Partially deleted in new
chr4	53377670	53428221	chr4:53377670-53428221	1	+	53377838	53428191	789624	12	253,40,58,104,65,108,131,69,110,108,94,195,	0,1554,4607,6102,12138,12850,13338,13759,22059,36944,48201,50356,
#Partially deleted in new
chr4	53377695	53459621	chr4:53377695-53459621	1	+	53377838	53459449	789624	15	228,40,58,104,65,108,131,110,94,157,55,56,214,138,320,	0,1529,4582,6077,12113,12825,13313,22034,48176,50331,64957,66352,75224,80957,81606,
#Partially deleted in new
chr4	53377802	53459621	chr4:53377802-53459621	0	+	53377802	53377802	8553170	15	1462,58,104,65,108,131,110,108,94,157,55,56,214,138,320,	0,4475,5970,12006,12718,13206,21927,36812,48069,50224,64850,66245,75117,80850,81499,
#Partially deleted in new
chr4	53377838	54295272	chr4:53377838-54295272	3	+	53377838	54295272	789624	24	85,45,40,58,104,65,108,131,69,110,108,94,49,105,111,154,167,116,123,112,100,106,242,148,	0,1234,1386,4439,5934,11970,12682,13170,13591,21891,36776,48033,897086,899549,900057,900523,902477,907532,908002,909591,910960,911170,912474,917286,
#Partially deleted in new
chr4	53377842	53440983	chr4:53377842-53440983	0	+	53377842	53377842	8553170	13	81,45,40,58,104,65,108,131,69,110,94,157,402,	0,1230,1382,4435,5930,11966,12678,13166,13587,21887,48029,50184,62739,
#Partially deleted in new
chr4	53378217	53389849	chr4:53378217-53389849	0	+	53378217	53378217	8553170	6	311,45,40,58,104,41,	0,855,1007,4060,5555,11591,
#Partially deleted in new
chr4	53382277	53459618	chr4:53382277-53459618	0	+	53382277	53390541	789624	12	58,108,131,110,94,157,27,55,56,214,138,317,	0,8243,8731,17452,43594,45749,58304,60375,61770,70642,76375,77024,
#Partially deleted in new
chr4	53425835	53459621	chr4:53425835-53459621	0	+	53425835	53425835	8553170	7	130,157,55,56,214,138,320,	0,2191,16817,18212,27084,32817,33466,
#Partially deleted in new
chr4	53428065	53460861	chr4:53428065-53460861	0	+	53428065	53459449	789624	7	118,27,55,56,223,138,1560,	0,12516,14587,15982,24854,30587,31236,
#Partially deleted in new
chr4	53442252	53453131	chr4:53442252-53453131	0	+	53442252	53442252	8553170	3	455,56,212,	0,1795,10667,
#Deleted in new
chr4	53458550	53459402	chr4:53458550-53459402	0	+	53458550	53458550	8553170	2	240,101,	0,751,
#Partially deleted in new
chr4	53459300	53558217	chr4:53459300-53558217	1	-	53460906	53557965	0	10	1742,159,229,178,135,372,203,153,242,344,	0,2134,17452,19264,22419,36722,39340,48016,48685,98573,
#Partially deleted in new
chr4	53460455	53591616	chr4:53460455-53591616	3	-	53460906	53574002	0	11	587,159,229,178,135,372,203,153,242,466,229,	0,979,16297,18109,21264,35567,38185,46861,47530,113167,130932,
#Partially deleted in new
chr4	53496399	53500502	chr4:53496399-53500502	0	+	53496399	53496399	8553170	2	200,86,	0,4017,
#Partially deleted in new
chr4	53498772	53508383	chr4:53498772-53508383	0	-	53498772	53498772	8553170	3	71,153,398,	0,8544,9213,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	53500077	53523274	chr4:53500077-53523274	1	+	53500077	53500077	789624	4	50,86,129,285,	0,339,1770,22912,
#Partially deleted in new
chr4	53501863	53549578	chr4:53501863-53549578	3	+	53501863	53501863	8553170	3	113,153,222,	0,22331,47493,
#Partially deleted in new
chr4	53501890	53539348	chr4:53501890-53539348	1	+	53501890	53501890	8553170	3	86,153,256,	0,22304,37202,
#Partially deleted in new
chr4	53573703	53652513	chr4:53573703-53652513	0	-	53573703	53574002	789624	2	385,346,	0,78464,
#Partially deleted in new
chr4	53573730	53591765	chr4:53573730-53591765	0	-	53573730	53574002	789624	3	358,128,117,	0,17657,17918,
#Partially deleted in new
chr4	53573954	53652477	chr4:53573954-53652477	0	-	53573954	53574002	789624	3	134,128,310,	0,17433,78213,
#Partially deleted in new
chr4	53573983	53617501	chr4:53573983-53617501	0	-	53573983	53574002	8553170	4	105,128,69,254,	0,17404,42533,43264,
#Partially deleted in new
chr4	53574056	53652477	chr4:53574056-53652477	0	-	53574056	53574056	8553170	4	32,128,100,310,	0,17331,28795,78111,
#Deleted in new
chr4	53575712	53576387	chr4:53575712-53576387	7	+	53575712	53575712	16724991	1	675,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	53592955	53604047	chr4:53592955-53604047	3	+	53592955	53592955	8553170	2	117,511,	0,10581,
#Deleted in new
chr4	53592984	53594103	chr4:53592984-53594103	1	+	53592984	53592984	8553170	2	88,259,	0,860,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	53659207	53737156	chr4:53659207-53737156	3	+	53659207	53659207	8553170	4	96,115,149,1234,	0,57685,62853,76715,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	53695900	53734358	chr4:53695900-53734358	1	+	53695900	53695900	789624	3	268,176,1172,	0,20931,37286,
#Deleted in new
chr4	53927498	53928138	chr4:53927498-53928138	7	-	53927498	53927498	16724991	1	640,	0,
#Deleted in new
chr4	53986586	53987058	chr4:53986586-53987058	7	-	53986586	53986586	16724991	1	472,	0,
#Partially deleted in new
chr4	53997414	53997712	chr4:53997414-53997712	3	-	53997414	53997414	8553170	1	298,	0,
#Partially deleted in new
chr4	54009788	54064690	chr4:54009788-54064690	3	-	54010094	54064300	789624	6	357,60,57,156,55,509,	0,4048,4274,39166,39462,54393,
#Partially deleted in new
chr4	54009824	54064300	chr4:54009824-54064300	1	-	54010094	54064300	789624	5	321,60,156,55,119,	0,4012,39130,39426,54357,
#Partially deleted in new
chr4	54009978	54064298	chr4:54009978-54064298	0	-	54010094	54064298	789624	6	167,60,57,72,55,117,	0,3858,4084,39060,39272,54203,
#Partially deleted in new
chr4	54048830	54064308	chr4:54048830-54064308	0	-	54048830	54048830	8553170	3	280,55,127,	0,420,15351,
#Deleted in new
chr4	54059596	54061210	chr4:54059596-54061210	3	+	54059596	54059596	8553170	1	1614,	0,
#Deleted in new
chr4	54076624	54076848	chr4:54076624-54076848	7	+	54076624	54076624	16724991	1	224,	0,
#Deleted in new
chr4	54086925	54087783	chr4:54086925-54087783	7	+	54086925	54086925	16724991	1	858,	0,
#Deleted in new
chr4	54099522	54101928	chr4:54099522-54101928	0	+	54099522	54099522	8553170	2	114,347,	0,2059,
#Deleted in new
chr4	54100030	54102505	chr4:54100030-54102505	3	+	54100344	54101922	789624	2	888,924,	0,1551,
#Deleted in new
chr4	54100030	54101955	chr4:54100030-54101955	1	+	54100344	54101922	789624	2	888,374,	0,1551,
#Deleted in new
chr4	54100172	54102227	chr4:54100172-54102227	1	+	54100344	54101623	789624	2	535,646,	0,1409,
#Deleted in new
chr4	54100815	54102146	chr4:54100815-54102146	0	+	54100815	54100815	8553170	2	103,565,	0,766,
#Deleted in new
chr4	54221125	54221472	chr4:54221125-54221472	7	+	54221125	54221125	16724991	1	347,	0,
#Partially deleted in new
chr4	54229096	54298247	chr4:54229096-54298247	3	+	54258768	54295272	0	23	319,61,318,261,131,172,190,116,127,194,95,133,105,111,154,167,116,123,112,100,106,242,3123,	0,29660,31998,34570,35822,38192,38455,41536,43297,44440,45434,45744,48291,48799,49265,51219,56274,56744,58333,59702,59912,61216,66028,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	54229279	54265353	chr4:54229279-54265353	1	+	54258768	54263956	0	4	136,61,318,1687,	0,29477,31815,34387,
#Partially deleted in new
chr4	54229291	54280758	chr4:54229291-54280758	0	+	54229291	54229291	8553170	15	124,61,261,131,172,190,116,127,194,95,133,105,111,154,443,	0,29465,34375,35627,37997,38260,41341,43102,44245,45239,45549,48096,48604,49070,51024,
#Partially deleted in new
chr4	54229310	54281978	chr4:54229310-54281978	0	+	54258768	54278894	0	18	105,61,318,261,131,172,190,116,127,194,95,133,105,111,154,153,167,398,	0,29446,31784,34356,35608,37978,38241,41322,43083,44226,45220,45530,48077,48585,49051,49508,51005,52270,
#Partially deleted in new
chr4	54229842	54263776	chr4:54229842-54263776	0	+	54258768	54263776	789624	4	97,61,318,110,	0,28914,31252,33824,
#Partially deleted in new
chr4	54230321	54263773	chr4:54230321-54263773	0	+	54258768	54263773	789624	4	285,61,318,107,	0,28435,30773,33345,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	54243574	54263762	chr4:54243574-54263762	0	+	54258768	54263762	789624	4	98,61,318,96,	0,15182,17520,20092,
#Deleted in new
chr4	54276750	54278246	chr4:54276750-54278246	0	+	54276750	54276750	8553170	3	24,105,351,	0,637,1145,
#Partially deleted in new
chr4	54277175	54281977	chr4:54277175-54281977	0	+	54277175	54277175	8553170	5	317,111,154,167,397,	0,720,1186,3140,4405,
#Partially deleted in new
chr4	54332891	54355954	chr4:54332891-54355954	3	+	54332891	54332891	8553170	2	43,431,	0,22632,
#Deleted in new
chr4	54376001	54376752	chr4:54376001-54376752	3	+	54376001	54376001	8553170	2	33,507,	0,244,
#Deleted in new
chr4	54440501	54446723	chr4:54440501-54446723	3	-	54440501	54440501	8553170	4	263,245,58,58,	0,3265,5867,6164,
#Partially deleted in new
chr4	54657917	54740715	chr4:54657917-54740715	3	+	54658014	54738557	0	21	164,270,282,137,169,190,116,115,194,107,127,105,111,151,92,128,123,112,100,106,2287,	0,37594,40366,41712,45806,49180,51506,65666,67939,69300,69498,69905,70093,71417,73410,73953,75152,78580,78803,79257,80511,
#Partially deleted in new
chr4	54657917	54739011	chr4:54657917-54739011	0	+	54658014	54738557	0	21	164,270,282,137,169,190,116,115,182,107,127,105,111,151,92,128,123,112,100,106,583,	0,37594,40366,41712,45806,49180,51506,65666,67939,69300,69498,69905,70093,71417,73410,73953,75152,78580,78803,79257,80511,
#Partially deleted in new
chr4	54657938	54695906	chr4:54657938-54695906	0	+	54657938	54657938	8553170	2	143,395,	0,37573,
#Deleted in new
chr4	54729291	54733401	chr4:54729291-54733401	0	+	54729291	54729291	8553170	4	194,92,128,332,	0,2036,2579,3778,
#Partially deleted in new
chr4	54836160	54845402	chr4:54836160-54845402	3	-	54836160	54836160	8553170	2	256,476,	0,8766,
#Partially deleted in new
chr4	54845567	54859241	chr4:54845567-54859241	3	+	54845567	54845567	8553170	2	45,420,	0,13254,
#Partially deleted in new
chr4	54943629	54956818	chr4:54943629-54956818	3	+	54943629	54943629	8553170	3	58,186,178,	0,10689,13011,
#Deleted in new
chr4	54976158	54976371	chr4:54976158-54976371	7	-	54976158	54976158	16724991	1	213,	0,
#Deleted in new
chr4	55031964	55032071	chr4:55031964-55032071	3	-	55031964	55031964	8553170	1	107,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	55053059	55092534	chr4:55053059-55092534	3	+	55053059	55053059	8553170	4	38,144,51,222,	0,19820,22132,39253,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	55063737	55064026	chr4:55063737-55064026	3	+	55063737	55063737	8553170	1	289,	0,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr4	55078258	55125595	chr4:55078258-55125595	3	-	55079940	55125293	0	30	1905,86,100,152,106,100,112,123,98,154,89,114,105,136,107,132,147,342,109,124,157,164,115,178,140,169,131,197,94,369,	0,3697,4277,9348,10609,11115,11432,11697,14358,16543,17318,17970,19403,19878,20438,23638,24103,26384,27573,28428,29478,32144,32395,35045,35867,36615,37022,40345,42838,46968,
#Partially deleted in new
chr4	55078480	55125595	chr4:55078480-55125595	1	-	55079940	55125293	0	30	1683,86,100,152,106,100,112,123,98,154,89,114,105,136,107,132,147,342,109,124,157,164,115,178,140,169,131,197,94,369,	0,3475,4055,9126,10387,10893,11210,11475,14136,16321,17096,17748,19181,19656,20216,23416,23881,26162,27351,28206,29256,31922,32173,34823,35645,36393,36800,40123,42616,46746,
#Partially deleted in new
chr4	55078530	55122921	chr4:55078530-55122921	0	-	55078530	55078530	8553170	30	1633,86,100,152,106,100,112,123,98,154,89,114,105,136,107,132,147,342,109,124,157,164,115,178,140,169,131,197,94,80,	0,3425,4005,9076,10337,10843,11160,11425,14086,16271,17046,17698,19131,19606,20166,23366,23831,26112,27301,28156,29206,31872,32123,34773,35595,36343,36750,40073,42566,44311,
#Deleted in new
chr4	55094849	55096720	chr4:55094849-55096720	0	-	55094849	55094849	8553170	3	106,89,492,	0,727,1379,
#Partially deleted in new
chr4	55104592	55125293	chr4:55104592-55125293	0	-	55104592	55104592	8553170	13	392,109,124,157,164,115,178,140,169,131,197,94,67,	0,1239,2094,3144,5810,6061,8711,9533,10281,10688,14011,16504,20634,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	55215623	55215919	chr4:55215623-55215919	3	-	55215623	55215623	8553170	1	296,	0,
#Deleted in new
chr4	55219343	55219973	chr4:55219343-55219973	7	+	55219343	55219343	16724991	1	630,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	55294489	55294598	chr4:55294489-55294598	3	+	55294489	55294489	8553170	1	109,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	55313010	55313924	chr4:55313010-55313924	7	-	55313010	55313010	16724991	2	275,278,	0,636,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	55346108	55373096	chr4:55346108-55373096	3	+	55346336	55370091	789624	5	449,143,198,135,3265,	0,13237,17965,21479,23723,
#Partially deleted in new
chr4	55346411	55370310	chr4:55346411-55370310	0	+	55346411	55370091	789624	3	146,143,479,	0,12934,23420,
#Partially deleted in new
chr4	55351811	55352408	chr4:55351811-55352408	7	-	55351811	55351811	16724991	1	597,	0,
#Partially deleted in new
chr4	55358999	55369975	chr4:55358999-55369975	0	+	55358999	55358999	8553170	4	230,143,198,144,	0,346,5074,10832,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	55363970	55383396	chr4:55363970-55383396	1	-	55363970	55363970	8553170	5	887,54,408,163,105,	0,1637,2785,10900,19321,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	55366600	55385580	chr4:55366600-55385580	1	-	55366600	55366600	789624	4	563,163,164,36,	0,8270,11006,18944,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	55366953	55385625	chr4:55366953-55385625	0	-	55366953	55366953	8553170	5	210,163,84,136,81,	0,7917,13842,15553,18591,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	55366953	55381893	chr4:55366953-55381893	0	-	55366953	55366953	8553170	5	210,163,164,84,169,	0,7917,10653,13842,14771,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	55366953	55383882	chr4:55366953-55383882	0	-	55366953	55366953	8553170	5	210,163,230,56,118,	0,7917,10653,15553,16811,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	55366953	55386687	chr4:55366953-55386687	0	-	55366953	55366953	8553170	6	210,163,164,56,118,379,	0,7917,10653,15553,16811,19355,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	55366953	55382642	chr4:55366953-55382642	0	-	55366953	55366953	8553170	4	210,122,163,136,	0,2652,7917,15553,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	55367009	55375972	chr4:55367009-55375972	0	-	55367009	55367009	8553170	3	154,163,441,	0,7861,8522,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	55367009	55385608	chr4:55367009-55385608	0	-	55367009	55367009	8553170	6	154,163,230,84,56,64,	0,7861,10597,13786,15497,18535,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	55367009	55385615	chr4:55367009-55385615	0	-	55367009	55367009	8553170	6	154,163,84,136,118,71,	0,7861,13786,15497,16755,18535,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	55367009	55380892	chr4:55367009-55380892	0	-	55367009	55367009	8553170	4	154,163,180,97,	0,7861,10597,13786,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	55367009	55382663	chr4:55367009-55382663	0	-	55367009	55367009	8553170	3	154,163,157,	0,7861,15497,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	55367009	55375188	chr4:55367009-55375188	0	-	55367009	55367009	8553170	2	154,318,	0,7861,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	55367011	55383450	chr4:55367011-55383450	0	-	55367011	55367011	8553170	5	152,163,84,56,159,	0,7859,13784,15495,16280,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	55367016	55385585	chr4:55367016-55385585	0	-	55367016	55367016	8553170	8	147,163,164,84,56,68,118,41,	0,7854,10590,13779,15490,16275,16748,18528,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	55374874	55395842	chr4:55374874-55395842	1	-	55374874	55374874	8553170	5	159,164,56,115,48,	0,2732,7632,11434,20920,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	55374923	55386892	chr4:55374923-55386892	0	-	55374923	55374923	8553170	4	110,164,118,584,	0,2683,8841,11385,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	55377606	55395842	chr4:55377606-55395842	1	-	55377606	55377606	8553170	6	164,84,56,115,270,48,	0,3189,4900,8702,9665,18188,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	55382537	55395837	chr4:55382537-55395837	1	-	55382537	55382537	8553170	5	142,115,188,266,43,	0,3771,4165,4734,13257,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	55386777	55395847	chr4:55386777-55395847	0	-	55386777	55386777	8553170	2	760,53,	0,9017,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	55387320	55395830	chr4:55387320-55395830	1	-	55387320	55387320	8553170	3	217,299,36,	0,6096,8474,
#Deleted in new
chr4	55387948	55388271	chr4:55387948-55388271	3	+	55387948	55387948	8553170	1	323,	0,
#Partially deleted in new
chr4	55395956	55426172	chr4:55395956-55426172	3	+	55396189	55425452	789624	6	440,226,176,183,106,797,	0,15657,21115,21846,28581,29419,
#Partially deleted in new
chr4	55395956	55425657	chr4:55395956-55425657	1	+	55396189	55425452	789624	3	440,106,282,	0,28581,29419,
#Partially deleted in new
chr4	55395962	55425804	chr4:55395962-55425804	0	+	55396189	55403259	789624	7	434,103,226,176,183,106,429,	0,7273,15651,21109,21840,28575,29413,
#Deleted in new
chr4	55396250	55397405	chr4:55396250-55397405	0	+	55396250	55396250	8553170	2	146,287,	0,868,
#Partially deleted in new
chr4	55398922	55417245	chr4:55398922-55417245	0	+	55398922	55398922	8553170	3	331,226,174,	0,12691,18149,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	55403242	55412156	chr4:55403242-55412156	0	+	55403242	55403242	8553170	2	96,543,	0,8371,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	55412635	55412738	chr4:55412635-55412738	3	+	55412635	55412635	8553170	1	103,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	55415270	55425545	chr4:55415270-55425545	0	+	55415270	55415270	8553170	5	887,176,183,106,170,	0,1801,2532,9267,10105,
#Partially deleted in new
chr4	55416922	55425537	chr4:55416922-55425537	0	+	55416922	55416922	8553170	5	325,46,117,106,162,	0,880,1125,7615,8453,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	55417128	55453397	chr4:55417128-55453397	0	+	55417128	55452306	789624	4	119,183,106,1159,	0,674,7409,35110,
#Partially deleted in new
chr4	55417690	55424812	chr4:55417690-55424812	0	+	55417690	55417690	8553170	2	295,275,	0,6847,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	55417918	55452458	chr4:55417918-55452458	0	+	55417918	55418000	789624	3	246,106,220,	0,6619,34320,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	55423113	55425631	chr4:55423113-55425631	0	+	55423113	55423113	8553170	2	1530,256,	0,2262,
#Partially deleted in new
chr4	55427902	55510027	chr4:55427902-55510027	1	-	55435414	55482785	0	22	7692,256,203,210,153,90,101,142,76,148,107,83,119,114,121,90,92,149,60,90,92,116,	0,10379,14529,15784,16730,20876,21493,22188,25151,25774,27994,28315,30989,31245,35782,42814,48060,50912,51737,54836,61471,82009,
#Partially deleted in new
chr4	55432475	55449426	chr4:55432475-55449426	0	-	55432475	55432475	8553170	7	3119,126,203,210,153,90,31,	0,5806,9956,11211,12157,16303,16920,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr4	55434822	55545932	chr4:55434822-55545932	1	-	55435414	55482785	0	24	772,256,203,210,153,90,101,142,76,148,107,83,119,114,121,90,92,149,60,90,157,92,154,480,	0,3459,7609,8864,9810,13956,14573,15268,18231,18854,21074,21395,24069,24325,28862,35894,41140,43992,44817,47916,51570,54551,75089,110630,
#Partially deleted in new
chr4	55435021	55547138	chr4:55435021-55547138	3	-	55435414	55482785	0	23	573,256,203,210,153,90,101,142,76,148,107,83,119,114,121,90,92,149,60,90,92,154,357,	0,3260,7410,8665,9611,13757,14374,15069,18032,18655,20875,21196,23870,24126,28663,35695,40941,43793,44618,47717,54352,74890,111760,
#Partially deleted in new
chr4	55442277	55443755	chr4:55442277-55443755	0	-	55442277	55442277	8553170	2	357,69,	0,1409,
#Partially deleted in new
chr4	55453759	55510066	chr4:55453759-55510066	0	-	55453759	55453759	8553170	13	65,107,83,119,114,121,90,92,149,60,90,92,155,	0,2137,2458,5132,5388,9925,16957,22203,25055,25880,28979,35614,56152,
#Partially deleted in new
chr4	55463697	55546546	chr4:55463697-55546546	0	-	55463697	55482785	789624	8	108,90,92,149,60,90,92,65,	0,7019,12265,15117,15942,19041,25676,82784,
#Partially deleted in new
chr4	55470743	55479060	chr4:55470743-55479060	0	-	55470743	55470743	8553170	3	63,92,246,	0,5219,8071,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	55478846	55546881	chr4:55478846-55546881	0	-	55478846	55478846	8553170	6	117,60,90,157,92,100,	0,793,3892,7546,10527,67935,
#Partially deleted in new
chr4	55482772	55546655	chr4:55482772-55546655	0	-	55482772	55482772	8553170	4	56,92,154,174,	0,6601,27139,63709,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	55486393	55546646	chr4:55486393-55546646	0	-	55486393	55486393	8553170	4	156,92,154,165,	0,2980,23518,60088,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	55501594	55501708	chr4:55501594-55501708	3	-	55501594	55501594	8553170	1	114,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	55540501	55540835	chr4:55540501-55540835	3	-	55540501	55540501	8553170	1	334,	0,
#Deleted in new
chr4	55547111	55547889	chr4:55547111-55547889	3	+	55547111	55547111	8553170	1	778,	0,
#Partially deleted in new
chr4	55556524	55592212	chr4:55556524-55592212	3	-	55556556	55592109	0	6	187,209,144,91,121,109,	0,5879,13193,24296,25592,35579,
#Partially deleted in new
chr4	55595228	55636284	chr4:55595228-55636284	1	-	55599145	55636192	789624	9	183,40,54,75,51,30,60,59,204,	0,3913,5293,10046,12069,12208,13891,35173,40852,
#Partially deleted in new
chr4	55595230	55636298	chr4:55595230-55636298	3	-	55599145	55636192	789624	10	181,40,54,75,51,30,60,48,59,218,	0,3911,5291,10044,12067,12206,13889,21107,35171,40850,
#Partially deleted in new
chr4	55595233	55636259	chr4:55595233-55636259	1	-	55599145	55636192	789624	8	178,40,54,75,60,48,59,179,	0,3908,5288,10041,13886,21104,35168,40847,
#Partially deleted in new
chr4	55595283	55636268	chr4:55595283-55636268	1	-	55599145	55636192	789624	9	128,40,54,51,30,60,48,59,188,	0,3858,5238,12014,12153,13836,21054,35118,40797,
#Partially deleted in new
chr4	55595316	55636698	chr4:55595316-55636698	0	-	55595316	55595316	789624	9	95,40,54,75,30,60,48,59,155,	0,3825,5205,9958,12120,13803,21021,35085,41227,
#Partially deleted in new
chr4	55599151	55630462	chr4:55599151-55630462	0	-	55599151	55599151	8553170	6	30,54,30,60,48,61,	0,1370,8285,9968,17186,31250,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	55798635	55798731	chr4:55798635-55798731	3	+	55798635	55798635	8553170	1	96,	0,
#Partially deleted in new
chr4	55819818	55837487	chr4:55819818-55837487	3	+	55820026	55837351	789624	3	329,131,403,	0,11515,17266,
#Partially deleted in new
chr4	55820002	55837382	chr4:55820002-55837382	0	+	55820026	55831394	789624	3	125,131,298,	0,11331,17082,
#Partially deleted in new
chr4	55853615	55905013	chr4:55853615-55905013	3	+	55858323	55904495	789624	19	338,134,131,160,188,228,133,110,150,106,45,164,108,77,229,184,200,195,671,	0,4698,6795,10611,14720,17062,17485,18233,24301,30207,35272,36607,37699,39019,39936,43101,46069,48728,50727,
#Partially deleted in new
chr4	55853674	55905034	chr4:55853674-55905034	1	+	55858323	55904495	789624	19	123,134,131,160,188,228,133,110,150,106,45,164,108,77,229,184,200,195,692,	0,4639,6736,10552,14661,17003,17426,18174,24242,30148,35213,36548,37640,38960,39877,43042,46010,48669,50668,
#Partially deleted in new
chr4	55853738	55905034	chr4:55853738-55905034	1	+	55858323	55904495	789624	18	59,134,131,160,188,228,133,110,150,106,164,108,77,229,184,200,195,692,	0,4575,6672,10488,14597,16939,17362,18110,24178,30084,36484,37576,38896,39813,42978,45946,48605,50604,
#Partially deleted in new
chr4	55858338	55868753	chr4:55858338-55868753	0	+	55858338	55858338	8553170	4	109,131,160,418,	0,2072,5888,9997,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	55882726	55905007	chr4:55882726-55905007	0	+	55882726	55882726	8553170	11	1202,45,164,108,77,229,184,200,134,195,665,	0,6161,7496,8588,9908,10825,13990,16958,17832,19617,21616,
#Partially deleted in new
chr4	55883767	55893627	chr4:55883767-55893627	0	+	55883767	55883767	8553170	5	161,164,108,77,76,	0,6455,7547,8867,9784,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	55885594	55885701	chr4:55885594-55885701	3	+	55885594	55885594	8553170	1	107,	0,
#Partially deleted in new
chr4	55888809	55893641	chr4:55888809-55893641	0	+	55888809	55888809	8553170	5	123,164,108,97,90,	0,1413,2505,3805,4742,
#Partially deleted in new
chr4	55902126	55904577	chr4:55902126-55904577	0	+	55902126	55902126	8553170	2	412,235,	0,2216,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	55948870	55960925	chr4:55948870-55960925	1	+	55952130	55959817	0	6	189,158,191,168,142,1244,	0,3215,4214,5345,8352,10811,
#Partially deleted in new
chr4	55948944	55952553	chr4:55948944-55952553	0	+	55948944	55948944	8553170	2	115,468,	0,3141,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr4	55948980	56033363	chr4:55948980-56033363	3	+	55952130	56024603	0	26	79,158,191,168,142,85,129,216,66,139,224,153,153,78,152,116,155,56,169,111,186,210,203,105,114,2004,	0,3105,4104,5235,8242,10701,15293,16663,20082,22289,25765,31162,32246,36300,42953,50321,50510,59346,60754,62431,62819,68667,70372,71695,75520,82379,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	55954277	55966580	chr4:55954277-55966580	0	+	55954277	55954277	8553170	5	106,142,85,129,937,	0,2945,5404,9996,11366,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr4	55964865	56033104	chr4:55964865-56033104	0	+	55964865	55964865	8553170	19	994,66,139,224,153,153,78,152,116,155,56,169,111,186,210,203,105,114,1745,	0,4197,6404,9880,15277,16361,20415,27068,34436,34625,43461,44869,46546,46934,52782,54487,55810,59635,66494,
#Partially deleted in new
chr4	56049072	56298340	chr4:56049072-56298340	0	+	56298229	56298340	789624	5	227,147,172,157,127,	0,130211,223248,248767,249141,
#Partially deleted in new
chr4	56049846	56314663	chr4:56049846-56314663	0	+	56298229	56314663	789624	8	166,147,172,136,165,69,183,624,	0,129437,222474,248367,257688,260819,263350,264193,
#Partially deleted in new
chr4	56049846	56314663	chr4:56049846-56314663	0	+	56196360	56314663	789624	9	166,147,84,172,136,165,69,183,624,	0,129437,146497,222474,248367,257688,260819,263350,264193,
#Partially deleted in new
chr4	56097389	56097504	chr4:56097389-56097504	7	+	56097389	56097389	16724991	1	115,	0,
#Partially deleted in new
chr4	56170194	56328625	chr4:56170194-56328625	3	+	56298229	56327804	789624	11	56,147,172,136,165,69,183,2650,191,163,982,	0,9089,102126,128019,137340,140471,143002,143845,153182,153909,157449,
#Partially deleted in new
chr4	56216101	56328625	chr4:56216101-56328625	1	+	56298229	56327804	789624	10	172,172,136,165,69,183,2650,191,163,982,	0,56219,82112,91433,94564,97095,97938,107275,108002,111542,
#Partially deleted in new
chr4	56246502	56307565	chr4:56246502-56307565	0	+	56298229	56307565	789624	4	210,172,136,31,	0,25818,51711,61032,
#Partially deleted in new
chr4	56272403	56328092	chr4:56272403-56328092	1	+	56298272	56327804	789624	10	89,136,22,165,69,183,2650,191,163,449,	0,25810,28822,35131,38262,40793,41636,50973,51700,55240,
#Deleted in new
chr4	56288484	56288584	chr4:56288484-56288584	3	-	56288484	56288484	8553170	1	100,	0,
#Partially deleted in new
chr4	56308928	56311621	chr4:56308928-56311621	0	+	56308928	56308928	8553170	4	181,69,198,414,	0,1737,1943,2279,
#Partially deleted in new
chr4	56316662	56327703	chr4:56316662-56327703	0	+	56316662	56327682	789624	3	27,191,60,	0,6714,10981,
#Deleted in new
chr4	56320718	56321334	chr4:56320718-56321334	7	-	56320718	56320718	16724991	1	616,	0,
#Partially deleted in new
chr4	56338286	56387508	chr4:56338286-56387508	1	-	56338705	56384299	789624	12	505,796,116,193,173,107,242,193,317,121,272,147,	0,10976,13055,15117,15752,16418,16895,33164,39861,44190,45783,49075,
#Partially deleted in new
chr4	56338286	56387508	chr4:56338286-56387508	1	-	56338401	56378356	789624	14	505,132,123,164,796,116,193,173,107,242,193,317,272,147,	0,4548,5275,6840,10976,13055,15117,15752,16418,16895,33164,39861,45783,49075,
#Partially deleted in new
chr4	56338289	56387500	chr4:56338289-56387500	3	-	56338401	56384299	789624	15	502,132,123,164,796,116,193,173,107,242,193,317,121,272,139,	0,4545,5272,6837,10973,13052,15114,15749,16415,16892,33161,39858,44187,45780,49072,
#Partially deleted in new
chr4	56338289	56387423	chr4:56338289-56387423	1	-	56338401	56382527	789624	14	502,132,123,164,796,116,193,173,107,242,193,317,121,62,	0,4545,5272,6837,10973,13052,15114,15749,16415,16892,33161,39858,44187,49072,
#Partially deleted in new
chr4	56338292	56387469	chr4:56338292-56387469	0	-	56371631	56384299	789624	12	499,132,123,164,796,116,193,242,193,121,272,108,	0,4542,5269,6834,10970,13049,15111,16889,33158,44184,45777,49069,
#Partially deleted in new
chr4	56338604	56387459	chr4:56338604-56387459	0	-	56378433	56384299	789624	13	187,132,123,796,116,193,173,107,242,193,317,272,98,	0,4230,4957,10658,12737,14799,15434,16100,16577,32846,39543,45465,48757,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	56348927	56387500	chr4:56348927-56387500	1	-	56349224	56384299	789624	11	1131,116,193,173,107,242,193,317,121,272,139,	0,2414,4476,5111,5777,6254,22523,29220,33549,35142,38434,
#Partially deleted in new
chr4	56355299	56387458	chr4:56355299-56387458	0	-	56355299	56355299	8553170	3	124,317,97,	0,22848,32062,
#Deleted in new
chr4	56356134	56356932	chr4:56356134-56356932	7	+	56356134	56356134	16724991	1	798,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	56381758	56387472	chr4:56381758-56387472	0	-	56381758	56381758	8553170	3	839,272,111,	0,2311,5603,
#Partially deleted in new
chr4	56382423	56384299	chr4:56382423-56384299	0	-	56382423	56382423	8553170	2	174,230,	0,1646,
#Deleted in new
chr4	56387624	56388153	chr4:56387624-56388153	3	+	56387624	56387624	8553170	1	529,	0,
#Partially deleted in new
chr4	56393361	56435615	chr4:56393361-56435615	3	-	56395351	56435477	789624	11	2187,121,222,128,152,73,146,113,207,67,266,	0,3257,5817,7422,7968,8747,9678,9927,13133,14288,41988,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	56393364	56400916	chr4:56393364-56400916	0	-	56393364	56393364	8553170	3	2184,121,1738,	0,3254,5814,
#Deleted in new
chr4	56396311	56396871	chr4:56396311-56396871	3	+	56396311	56396311	8553170	1	560,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	56401389	56408328	chr4:56401389-56408328	0	-	56401389	56401389	8553170	7	92,73,146,113,207,67,230,	0,719,1650,1899,5105,6260,6709,
#Partially deleted in new
chr4	56403062	56435508	chr4:56403062-56435508	0	-	56403363	56435477	789624	6	123,113,139,207,67,159,	0,226,917,3432,4587,32287,
#Partially deleted in new
chr4	56403073	56435496	chr4:56403073-56435496	0	-	56406594	56435477	789624	5	112,113,124,67,147,	0,215,3421,4576,32276,
#Partially deleted in new
chr4	56410515	56431548	chr4:56410515-56431548	7	+	56410515	56410515	16724991	6	382,87,435,90,66,122,	0,5836,9098,11844,18424,20911,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	56410641	56423457	chr4:56410641-56423457	4	+	56410641	56410641	16724991	4	256,84,87,3844,	0,3591,5710,8972,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	56435740	56461361	chr4:56435740-56461361	1	+	56446756	56459538	789624	10	188,67,198,179,180,114,84,181,159,1990,	0,521,5922,10954,12677,12969,14878,16131,17862,23631,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	56435748	56461368	chr4:56435748-56461368	1	+	56436312	56459538	0	10	180,67,198,179,180,114,84,181,159,1997,	0,513,5914,10946,12669,12961,14870,16123,17854,23623,
#Partially deleted in new
chr4	56435751	56459499	chr4:56435751-56459499	0	+	56436312	56459499	789624	10	224,67,198,179,180,114,84,181,159,128,	0,510,5911,10943,12666,12958,14867,16120,17851,23620,
#Partially deleted in new
chr4	56436038	56441863	chr4:56436038-56441863	0	+	56436038	56436038	8553170	2	290,201,	0,5624,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	56436137	56461361	chr4:56436137-56461361	1	+	56436312	56459538	0	10	191,198,21,179,180,114,84,181,159,1990,	0,5525,10219,10557,12280,12572,14481,15734,17465,23234,
#Partially deleted in new
chr4	56436137	56442028	chr4:56436137-56442028	0	+	56436137	56436137	8553170	2	191,366,	0,5525,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	56436151	56464579	chr4:56436151-56464579	3	+	56436312	56459538	0	9	177,198,179,180,114,84,181,159,5208,	0,5511,10543,12266,12558,14467,15720,17451,23220,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	56448698	56451191	chr4:56448698-56451191	0	+	56448698	56448698	8553170	2	125,573,	0,1920,
#Partially deleted in new
chr4	56467335	56503681	chr4:56467335-56503681	3	+	56467635	56501861	0	19	409,121,124,144,112,32,125,58,132,129,73,65,96,104,78,138,38,160,1998,	0,2317,4384,6718,6944,9335,11043,11256,15803,17400,18989,20613,22052,22997,23232,24095,28021,33200,34348,
#Partially deleted in new
chr4	56467616	56502415	chr4:56467616-56502415	1	+	56467635	56501861	0	17	128,121,124,144,112,32,132,129,73,65,96,104,78,138,38,160,732,	0,2036,4103,6437,6663,9054,15522,17119,18708,20332,21771,22716,22951,23814,27740,32919,34067,
#Partially deleted in new
chr4	56467616	56503681	chr4:56467616-56503681	1	+	56467635	56501861	0	19	128,121,124,144,112,32,125,58,132,129,73,65,96,104,78,138,38,160,1998,	0,2036,4103,6437,6663,9054,10762,10975,15522,17119,18708,20332,21771,22716,22951,23814,27740,32919,34067,
#Partially deleted in new
chr4	56467617	56474508	chr4:56467617-56474508	1	+	56467635	56474444	789624	5	127,121,124,144,229,	0,2035,4102,6436,6662,
#Partially deleted in new
chr4	56467735	56489401	chr4:56467735-56489401	0	+	56467735	56489401	789624	12	9,121,124,144,112,32,125,58,129,73,65,14,	0,1917,3984,6318,6544,8935,10643,10856,17000,18589,20213,21652,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	56475676	56477172	chr4:56475676-56477172	0	+	56475676	56475676	8553170	1	1496,	0,
#Deleted in new
chr4	56486227	56491683	chr4:56486227-56491683	0	+	56486227	56486227	8553170	6	170,65,96,104,78,253,	0,1721,3160,4105,4340,5203,
#Partially deleted in new
chr4	56489061	56495392	chr4:56489061-56495392	0	+	56489061	56489061	8553170	5	422,104,78,138,36,	0,1271,1506,2369,6295,
#Partially deleted in new
chr4	56495270	56501828	chr4:56495270-56501828	0	+	56495270	56495270	8553170	3	124,160,145,	0,5265,6413,
#Partially deleted in new
chr4	56500450	56503673	chr4:56500450-56503673	0	+	56500450	56500450	8553170	2	245,1990,	0,1233,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	56505208	56524448	chr4:56505208-56524448	1	+	56511331	56523876	789624	4	301,163,176,752,	0,5976,13469,18488,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	56505759	56525481	chr4:56505759-56525481	3	+	56505862	56523876	789624	4	382,163,176,1785,	0,5425,12918,17937,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	56505940	56524959	chr4:56505940-56524959	0	+	56505940	56518740	789624	3	201,176,1263,	0,12737,17756,
#Partially deleted in new
chr4	56530608	56603507	chr4:56530608-56603507	3	+	56530676	56603323	789624	9	561,34,66,129,138,115,132,176,299,	0,18181,21940,28783,44896,53888,65891,70325,72600,
#Partially deleted in new
chr4	56557715	56596545	chr4:56557715-56596545	0	+	56557715	56557715	8553170	5	143,129,138,115,46,	0,1676,17789,26781,38784,
#Deleted in new
chr4	56593003	56595681	chr4:56593003-56595681	7	+	56593003	56593003	16724991	1	2678,	0,
#Partially deleted in new
chr4	56647987	56681899	chr4:56647987-56681899	3	-	56648719	56656000	789624	3	810,156,645,	0,7869,33267,
#Partially deleted in new
chr4	56647987	56681706	chr4:56647987-56681706	1	-	56648719	56657816	789624	4	810,156,125,452,	0,7869,9787,33267,
#Partially deleted in new
chr4	56647988	56681706	chr4:56647988-56681706	1	-	56648786	56657816	789624	5	809,130,156,125,452,	0,2694,7868,9786,33266,
#Partially deleted in new
chr4	56647997	56656516	chr4:56647997-56656516	1	-	56648719	56656000	789624	3	800,156,173,	0,7859,8346,
#Partially deleted in new
chr4	56647997	56656507	chr4:56647997-56656507	1	-	56648719	56656000	789624	3	800,156,208,	0,7859,8302,
#Partially deleted in new
chr4	56647997	56681707	chr4:56647997-56681707	1	-	56648786	56656000	789624	4	800,130,156,55,	0,2685,7859,33655,
#Partially deleted in new
chr4	56647997	56656304	chr4:56647997-56656304	1	-	56648719	56656000	789624	2	800,448,	0,7859,
#Partially deleted in new
chr4	56647997	56656487	chr4:56647997-56656487	1	-	56648719	56656000	789624	3	800,156,45,	0,7859,8445,
#Partially deleted in new
chr4	56647997	56656522	chr4:56647997-56656522	1	-	56648719	56656000	789624	3	800,156,183,	0,7859,8342,
#Partially deleted in new
chr4	56647997	56681294	chr4:56647997-56681294	1	-	56648719	56656000	789624	4	800,156,68,40,	0,7859,28501,33257,
#Partially deleted in new
chr4	56647997	56656525	chr4:56647997-56656525	1	-	56648719	56656000	789624	3	800,156,182,	0,7859,8346,
#Deleted in new
chr4	56647999	56651202	chr4:56647999-56651202	0	-	56647999	56647999	8553170	1	3203,	0,
#Partially deleted in new
chr4	56648274	56681877	chr4:56648274-56681877	1	-	56648719	56656000	789624	3	523,156,225,	0,7582,33378,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	56659151	56681297	chr4:56659151-56681297	0	-	56659151	56659151	8553170	3	387,147,43,	0,13503,22103,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	56662468	56665694	chr4:56662468-56665694	3	-	56662468	56662468	8553170	1	3226,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	56678757	56681297	chr4:56678757-56681297	0	-	56678757	56678757	8553170	1	2540,	0,
#Deleted in new
chr4	56710059	56710614	chr4:56710059-56710614	7	+	56710059	56710059	16724991	1	555,	0,
#Partially deleted in new
chr4	56760918	56761485	chr4:56760918-56761485	7	-	56760918	56760918	16724991	1	567,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	56794347	56794642	chr4:56794347-56794642	3	-	56794347	56794347	8553170	1	295,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	56805833	56806131	chr4:56805833-56806131	3	+	56805833	56805833	8553170	1	298,	0,
#Partially deleted in new
chr4	56809859	56811796	chr4:56809859-56811796	0	-	56809859	56809859	8553170	2	325,112,	0,1825,
#Partially deleted in new
chr4	56809860	56821742	chr4:56809860-56821742	3	-	56810138	56821662	0	4	324,110,44,135,	0,1824,10675,11747,
#Partially deleted in new
chr4	56809860	56821742	chr4:56809860-56821742	1	-	56810138	56821662	789624	4	324,110,44,285,	0,1824,10675,11597,
#Partially deleted in new
chr4	56809861	56821742	chr4:56809861-56821742	1	-	56811691	56821662	789624	3	323,114,240,	0,1823,11641,
#Partially deleted in new
chr4	56809861	56821742	chr4:56809861-56821742	1	-	56809984	56821662	789624	2	323,285,	0,11596,
#Partially deleted in new
chr4	56809871	56821694	chr4:56809871-56821694	1	-	56810138	56821662	789624	4	313,110,44,192,	0,1813,10664,11631,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	56810421	56810681	chr4:56810421-56810681	3	+	56810421	56810421	8553170	1	260,	0,
#Partially deleted in new
chr4	56811691	56821742	chr4:56811691-56821742	1	-	56811691	56821662	789624	3	103,4,285,	0,5019,9766,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	56818217	56818314	chr4:56818217-56818314	3	-	56818217	56818217	8553170	1	97,	0,
#Partially deleted in new
chr4	56907875	56927655	chr4:56907875-56927655	1	+	56910638	56927655	789624	4	338,907,84,41,	0,2754,11911,19739,
#Partially deleted in new
chr4	56907875	56919989	chr4:56907875-56919989	1	+	56910638	56919989	789624	4	338,907,84,5,	0,2754,11911,12109,
#Partially deleted in new
chr4	56907875	56966678	chr4:56907875-56966678	1	+	56910638	56966678	789624	3	338,907,23,	0,2754,58780,
#Partially deleted in new
chr4	56907875	56966678	chr4:56907875-56966678	1	+	56910638	56966678	789624	4	338,907,84,23,	0,2754,11911,58780,
#Partially deleted in new
chr4	56907908	56935844	chr4:56907908-56935844	3	+	56910638	56932152	0	4	305,907,84,6004,	0,2721,11878,21932,
#Partially deleted in new
chr4	56908093	56932184	chr4:56908093-56932184	1	+	56910638	56932152	789624	5	120,310,201,84,391,	0,2536,3242,11693,23700,
#Deleted in new
chr4	56908912	56911015	chr4:56908912-56911015	0	+	56908912	56908912	8553170	2	127,386,	0,1717,
#Partially deleted in new
chr4	56908912	56935836	chr4:56908912-56935836	1	+	56910638	56932152	0	4	127,907,84,5996,	0,1717,10874,20928,
#Partially deleted in new
chr4	56909015	56929878	chr4:56909015-56929878	1	+	56910638	56927655	789624	5	24,907,84,50,38,	0,1614,10771,18599,20825,
#Deleted in new
chr4	56909189	56910688	chr4:56909189-56910688	0	+	56909189	56909189	8553170	2	398,59,	0,1440,
#Partially deleted in new
chr4	56911211	56929959	chr4:56911211-56929959	0	+	56911211	56911211	8553170	4	325,84,50,119,	0,8575,16403,18629,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	56960926	56961373	chr4:56960926-56961373	3	-	56960926	56960926	8553170	1	447,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	56963369	56978823	chr4:56963369-56978823	3	-	56963449	56977585	789624	7	292,121,117,132,206,165,2382,	0,1036,3250,5014,9778,10488,13072,
#Partially deleted in new
chr4	56977721	56990847	chr4:56977721-56990847	0	+	56978985	56990847	789624	4	70,365,73,100,	0,918,8632,13026,
#Partially deleted in new
chr4	56977741	57031158	chr4:56977741-57031158	3	+	56978985	57030988	0	26	67,365,73,151,113,220,159,165,197,120,187,144,140,112,155,199,169,97,95,251,90,108,114,161,196,260,	0,898,8612,13006,16662,16905,17509,21875,27504,27858,29074,32619,33006,33247,37760,39301,39818,43157,44410,45588,45920,46263,47144,47635,52462,53157,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	56977781	56978961	chr4:56977781-56978961	0	+	56977781	56977781	8553170	2	219,322,	0,858,
#Partially deleted in new
chr4	56978863	57031158	chr4:56978863-57031158	1	+	56994481	57030988	789624	24	141,73,113,220,159,165,197,120,187,144,140,112,155,199,169,97,95,251,90,108,114,161,196,260,	0,7490,15540,15783,16387,20753,26382,26736,27952,31497,31884,32125,36638,38179,38696,42035,43288,44466,44798,45141,46022,46513,51340,52035,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr4	56978868	57031007	chr4:56978868-57031007	1	+	56986355	57030988	789624	26	136,178,73,151,113,220,159,165,197,120,187,144,140,112,155,199,169,97,95,251,90,108,114,161,196,109,	0,6411,7485,11879,15535,15778,16382,20748,26377,26731,27947,31492,31879,32120,36633,38174,38691,42030,43283,44461,44793,45136,46017,46508,51335,52030,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	56978895	56990906	chr4:56978895-56990906	0	+	56986355	56990906	789624	4	109,198,73,159,	0,6364,7458,11852,
#Partially deleted in new
chr4	56978903	56986803	chr4:56978903-56986803	0	+	56978903	56978903	8553170	2	101,450,	0,7450,
#Partially deleted in new
chr4	56978942	57031168	chr4:56978942-57031168	1	+	56978985	57030988	0	25	62,73,151,113,220,159,165,197,120,187,144,140,112,155,199,169,97,95,251,90,108,114,161,196,270,	0,7411,11805,15461,15704,16308,20674,26303,26657,27873,31418,31805,32046,36559,38100,38617,41956,43209,44387,44719,45062,45943,46434,51261,51956,
#Partially deleted in new
chr4	56986408	57030988	chr4:56986408-57030988	1	+	56986408	57030988	789624	23	18,113,220,159,165,197,120,187,144,140,112,155,199,169,97,95,251,90,108,114,161,196,90,	0,7995,8238,8842,13208,18837,19191,20407,23952,24339,24580,29093,30634,31151,34490,35743,36921,37253,37596,38477,38968,43795,44490,
#Partially deleted in new
chr4	57002691	57002792	chr4:57002691-57002792	3	+	57002691	57002691	8553170	1	101,	0,
#Partially deleted in new
chr4	57009558	57031158	chr4:57009558-57031158	0	+	57009558	57009558	8553170	15	946,140,112,155,199,169,97,95,251,90,108,114,161,196,260,	0,1189,1430,5943,7484,8001,11340,12593,13771,14103,14446,15327,15818,20645,21340,
#Partially deleted in new
chr4	57010172	57015658	chr4:57010172-57015658	0	+	57010172	57010172	8553170	5	28,144,140,112,157,	0,188,575,816,5329,
#Deleted in new
chr4	57023226	57023751	chr4:57023226-57023751	0	+	57023226	57023226	8553170	2	354,90,	0,435,
#Deleted in new
chr4	57023490	57024962	chr4:57023490-57024962	0	+	57023490	57023490	8553170	3	261,108,77,	0,514,1395,
#Partially deleted in new
chr4	57030772	57110385	chr4:57030772-57110385	3	-	57031316	57110351	789624	5	564,127,117,110,509,	0,1653,2422,10051,79104,
#Partially deleted in new
chr4	57030772	57065603	chr4:57030772-57065603	0	-	57030772	57030772	8553170	5	564,127,117,110,115,	0,1653,2422,10051,34716,
#Partially deleted in new
chr4	57032037	57110385	chr4:57032037-57110385	1	-	57032414	57110351	789624	4	515,117,110,509,	0,1157,8786,77839,
#Partially deleted in new
chr4	57072682	57073132	chr4:57072682-57073132	7	+	57072682	57072682	16724991	1	450,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	57109761	57205299	chr4:57109761-57205299	1	+	57109761	57109761	789624	5	209,150,688,116,226,	0,78408,91371,94716,95312,
#Partially deleted in new
chr4	57109852	57205510	chr4:57109852-57205510	2	+	57109852	57109852	8553170	4	118,83,116,437,	0,91280,94625,95221,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	57154576	57156452	chr4:57154576-57156452	3	+	57154576	57154576	8553170	3	165,114,281,	0,438,1595,
#Partially deleted in new
chr4	57179144	57205510	chr4:57179144-57205510	0	+	57179144	57179144	8553170	5	140,83,35,116,437,	0,21988,22641,25333,25929,
#Deleted in new
chr4	57352998	57353329	chr4:57352998-57353329	7	-	57352998	57352998	16724991	1	331,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	57425871	57465986	chr4:57425871-57465986	3	+	57425871	57425871	789624	6	147,131,123,143,148,346,	0,1107,1433,8870,38353,39769,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	57491389	57495233	chr4:57491389-57495233	3	+	57491389	57491389	8553170	2	103,680,	0,3164,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	57595939	57605872	chr4:57595939-57605872	3	-	57595939	57595939	8553170	2	528,207,	0,9726,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	57605693	57658800	chr4:57605693-57658800	3	-	57605693	57605693	8553170	3	178,123,55,	0,19496,53052,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	57720034	57724655	chr4:57720034-57724655	3	+	57720034	57720034	8553170	2	142,2530,	0,2091,
#Deleted in new
chr4	58103146	58103434	chr4:58103146-58103434	7	+	58103146	58103146	16724991	1	288,	0,
#Deleted in new
chr4	58117757	58118070	chr4:58117757-58118070	7	-	58117757	58117757	16724991	1	313,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	58524514	58536328	chr4:58524514-58536328	3	-	58524514	58524514	789624	3	310,62,55,	0,4694,11759,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	58562164	58565122	chr4:58562164-58565122	3	-	58562164	58562164	8553170	3	155,211,54,	0,1342,2904,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	58780625	58984141	chr4:58780625-58984141	3	-	58780625	58780625	8553170	5	501,98,226,100,136,	0,1919,3410,196388,203380,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	58860510	58977097	chr4:58860510-58977097	0	-	58860510	58860510	8553170	3	98,85,84,	0,374,116503,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	58984281	59046957	chr4:58984281-59046957	3	+	58984281	58984281	789624	3	54,105,535,	0,56305,62141,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	58987181	58988118	chr4:58987181-58988118	3	-	58987181	58987181	789624	3	503,140,15,	0,634,922,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	59013572	59046959	chr4:59013572-59046959	0	+	59013572	59013572	789624	2	53,537,	0,32850,
#Partially deleted in new
chr4	59152833	59176146	chr4:59152833-59176146	3	+	59152833	59152833	8553170	2	53,274,	0,23039,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	59533785	59533898	chr4:59533785-59533898	3	+	59533785	59533785	8553170	1	113,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	59551141	59630324	chr4:59551141-59630324	3	-	59551141	59551141	8553170	6	113,87,123,61,60,114,	0,9859,13081,23156,43278,79069,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	59767815	59792114	chr4:59767815-59792114	3	-	59767815	59767815	8553170	4	419,113,58,170,	0,18738,19708,24129,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	59833174	59833276	chr4:59833174-59833276	3	+	59833174	59833174	8553170	1	102,	0,
#Partially deleted in new
chr4	59834062	59834167	chr4:59834062-59834167	3	+	59834062	59834062	8553170	1	105,	0,
#Deleted in new
chr4	60038268	60038586	chr4:60038268-60038586	7	+	60038268	60038268	16724991	1	318,	0,
#Partially deleted in new
chr4	60750585	60789999	chr4:60750585-60789999	3	+	60750585	60750585	8553170	3	280,119,185,	0,37748,39229,
#Deleted in new
chr4	60784114	60784696	chr4:60784114-60784696	7	+	60784114	60784114	16724991	1	582,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	61143655	61153729	chr4:61143655-61153729	1	+	61143655	61143655	8553170	4	120,228,54,194,	0,1105,3695,9880,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	61143656	61153962	chr4:61143656-61153962	3	+	61143656	61143656	8553170	2	119,427,	0,9879,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr4	61201257	62078335	chr4:61201257-62078335	1	+	61497293	62070169	789624	26	508,66,228,214,110,15,801,81,303,104,186,39,184,123,209,177,210,221,67,92,27,169,126,97,52,8227,	0,181866,295863,385969,475568,529364,531496,612551,691398,694473,708302,711461,733582,734665,745656,746842,778305,782125,795033,796916,827597,830184,836473,843195,866908,868851,
#Partially deleted in new
chr4	61201663	61385769	chr4:61201663-61385769	0	+	61201663	61201663	8553170	3	102,66,359,	0,181460,183747,
#Partially deleted in new
chr4	61202141	62072466	chr4:61202141-62072466	1	+	61497293	62070908	789624	25	90,66,228,214,110,15,801,81,303,104,186,39,184,123,209,177,210,221,67,92,27,169,126,97,2358,	0,180982,294979,385085,474684,528480,530612,611667,690514,693589,707418,710577,732698,733781,744772,745958,777421,781241,794149,796032,826713,829300,835589,842311,867967,
#Deleted in new
chr4	61211651	61212203	chr4:61211651-61212203	7	+	61211651	61211651	16724991	1	552,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	61420245	61428221	chr4:61420245-61428221	3	-	61420245	61420245	8553170	3	455,126,1498,	0,5066,6478,
#Partially deleted in new
chr4	61497120	62071138	chr4:61497120-62071138	1	+	61497293	62070169	789624	23	228,214,110,15,801,81,303,104,186,39,184,123,209,177,210,221,67,92,169,126,97,52,1030,	0,90106,179705,233501,235633,316688,395535,398610,412439,415598,437719,438802,449793,450979,482442,486262,499170,501053,534321,540610,547332,571045,572988,
#Partially deleted in new
chr4	61497198	62071038	chr4:61497198-62071038	1	+	61497293	62070169	789624	25	150,214,110,15,801,81,303,104,186,39,184,123,209,177,210,221,67,92,27,169,126,97,129,52,930,	0,90028,179627,233423,235555,316610,395457,398532,412361,415520,437641,438724,449715,450901,482364,486184,499092,500975,531656,534243,540532,547254,566306,570967,572910,
#Partially deleted in new
chr4	61497198	62071038	chr4:61497198-62071038	1	+	61497293	62070169	789624	24	150,214,110,15,801,81,303,104,186,39,184,123,209,177,210,221,67,92,169,126,97,129,52,930,	0,90028,179627,233423,235555,316610,395457,398532,412361,415520,437641,438724,449715,450901,482364,486184,499092,500975,534243,540532,547254,566306,570967,572910,
#Partially deleted in new
chr4	61497293	62071127	chr4:61497293-62071127	1	+	61497293	62070908	789624	24	55,214,110,15,801,81,303,104,186,39,184,123,209,177,210,221,67,92,27,169,126,97,129,1019,	0,89933,179532,233328,235460,316515,395362,398437,412266,415425,437546,438629,449620,450806,482269,486089,498997,500880,531561,534148,540437,547159,566211,572815,
#Partially deleted in new
chr4	61497293	62071127	chr4:61497293-62071127	1	+	61497293	62070908	789624	23	55,214,110,15,801,81,303,104,186,39,184,123,209,177,210,221,67,92,169,126,97,129,1019,	0,89933,179532,233328,235460,316515,395362,398437,412266,415425,437546,438629,449620,450806,482269,486089,498997,500880,534148,540437,547159,566211,572815,
#Partially deleted in new
chr4	61587367	61677392	chr4:61587367-61677392	0	+	61587367	61587367	8553170	2	73,567,	0,89458,
#Deleted in new
chr4	61775448	61775850	chr4:61775448-61775850	7	-	61775448	61775448	16724991	1	402,	0,
#Partially deleted in new
chr4	61895740	62072437	chr4:61895740-62072437	0	+	61895740	62070908	789624	14	94,186,184,123,209,177,210,221,67,92,169,126,97,2329,	0,13819,39099,40182,51173,52359,83822,87642,100550,102433,135701,141990,148712,174368,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	61906312	61906408	chr4:61906312-61906408	3	+	61906312	61906312	8553170	1	96,	0,
#Partially deleted in new
chr4	61933842	61947077	chr4:61933842-61947077	0	+	61933842	61933842	8553170	4	116,184,123,164,	0,997,2080,13071,
#Deleted in new
chr4	62105659	62106049	chr4:62105659-62106049	7	-	62105659	62105659	16724991	1	390,	0,
#Partially deleted in new
chr4	62117904	62136756	chr4:62117904-62136756	0	-	62117904	62117904	8553170	3	198,62,91,	0,2323,18761,
#Deleted in new
chr4	62248293	62248770	chr4:62248293-62248770	7	+	62248293	62248293	16724991	1	477,	0,
#Partially deleted in new
chr4	62291561	62292337	chr4:62291561-62292337	7	+	62291561	62291561	16724991	2	31,322,	0,454,
#Deleted in new
chr4	62489494	62490218	chr4:62489494-62490218	7	-	62489494	62489494	16724991	1	724,	0,
#Deleted in new
chr4	62510468	62510771	chr4:62510468-62510771	7	+	62510468	62510468	16724991	1	303,	0,
#Partially deleted in new
chr4	62816825	62818794	chr4:62816825-62818794	7	+	62816825	62816825	16724991	1	1969,	0,
#Partially deleted in new
chr4	63128310	63143881	chr4:63128310-63143881	3	+	63128310	63128310	8553170	3	26,20,626,	0,14733,14945,
#Partially deleted in new
chr4	63350113	63351472	chr4:63350113-63351472	7	+	63350113	63350113	16724991	1	1359,	0,
#Partially deleted in new
chr4	63468700	63494278	chr4:63468700-63494278	3	-	63468700	63468700	8553170	3	245,145,58,	0,5293,25520,
#Partially deleted in new
chr4	64275256	64409468	chr4:64275256-64409468	1	-	64277034	64409351	789624	12	1795,46,86,58,44,73,106,116,104,45,52,351,	0,5784,6217,14453,24717,29909,34569,39391,47432,53255,99915,133861,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	64277701	64409462	chr4:64277701-64409462	3	-	64280071	64409351	789624	12	2498,46,86,58,44,73,106,116,104,45,52,345,	0,3339,3772,12008,22272,27464,32124,36946,44987,50810,97470,131416,
#Deleted in new
chr4	64280074	64281536	chr4:64280074-64281536	0	-	64280178	64281536	789624	2	125,63,	0,1399,
#Partially deleted in new
chr4	64298863	64322696	chr4:64298863-64322696	0	-	64298863	64298863	8553170	6	386,44,73,106,116,8,	0,1110,6302,10962,15784,23825,
#Partially deleted in new
chr4	64304904	64409456	chr4:64304904-64409456	0	-	64304904	64304904	8553170	7	334,106,116,104,45,52,339,	0,4921,9743,17784,23607,70267,104213,
#Partially deleted in new
chr4	64322686	64409398	chr4:64322686-64409398	0	-	64322686	64409351	789624	4	106,45,52,281,	0,5825,52485,86431,
#Deleted in new
chr4	64397693	64397787	chr4:64397693-64397787	3	-	64397693	64397693	8553170	1	94,	0,
#Deleted in new
chr4	64430908	64433215	chr4:64430908-64433215	7	+	64430908	64430908	16724991	2	1622,441,	0,1866,
#Deleted in new
chr4	64606417	64606613	chr4:64606417-64606613	7	+	64606417	64606417	16724991	1	196,	0,
#Deleted in new
chr4	64607702	64608831	chr4:64607702-64608831	7	-	64607702	64607702	16724991	1	1129,	0,
#Deleted in new
chr4	64608904	64609424	chr4:64608904-64609424	7	+	64608904	64608904	16724991	1	520,	0,
#Deleted in new
chr4	64609453	64610532	chr4:64609453-64610532	7	-	64609453	64609453	16724991	1	1079,	0,
#Deleted in new
chr4	64610615	64610909	chr4:64610615-64610909	7	-	64610615	64610615	16724991	1	294,	0,
#Deleted in new
chr4	64610979	64611308	chr4:64610979-64611308	7	-	64610979	64610979	16724991	1	329,	0,
#Deleted in new
chr4	64611373	64611888	chr4:64611373-64611888	7	-	64611373	64611373	16724991	1	515,	0,
#Deleted in new
chr4	64767129	64767897	chr4:64767129-64767897	7	-	64767129	64767129	16724991	1	768,	0,
#Partially deleted in new
chr4	65034633	65036017	chr4:65034633-65036017	7	-	65034633	65034633	16724991	1	1384,	0,
#Deleted in new
chr4	65216615	65217433	chr4:65216615-65217433	7	+	65216615	65216615	16724991	1	818,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	65225866	65241814	chr4:65225866-65241814	3	-	65225866	65225866	8553170	3	144,81,633,	0,12517,15315,
#Partially deleted in new
chr4	65319562	65670343	chr4:65319562-65670343	3	-	65324113	65669742	0	18	4657,156,194,150,210,62,186,126,68,66,103,160,125,336,156,664,65,782,	0,12410,16369,28491,31826,33479,45454,46369,47794,57435,84811,94721,100878,170814,175825,282078,323800,349999,
#Partially deleted in new
chr4	65319562	65670495	chr4:65319562-65670495	1	-	65324113	65669742	789624	17	4657,156,194,150,210,62,186,126,68,106,160,125,336,156,664,65,934,	0,12410,16369,28491,31826,33479,45454,46369,47794,84811,94721,100878,170814,175825,282078,323800,349999,
#Partially deleted in new
chr4	65319562	65670495	chr4:65319562-65670495	1	-	65324113	65669742	789624	18	4657,156,194,150,210,62,186,126,68,66,106,160,125,336,156,664,65,934,	0,12410,16369,28491,31826,33479,45454,46369,47794,57435,84811,94721,100878,170814,175825,282078,323800,349999,
#Partially deleted in new
chr4	65323394	65670060	chr4:65323394-65670060	1	-	65324113	65669742	789624	16	825,156,194,150,210,62,186,126,68,66,106,160,125,664,65,499,	0,8578,12537,24659,27994,29647,41622,42537,43962,53603,80979,90889,97046,278246,319968,346167,
#Partially deleted in new
chr4	65323927	65669935	chr4:65323927-65669935	1	-	65324113	65669742	0	17	292,156,194,150,210,62,186,126,68,103,160,125,336,156,664,65,374,	0,8045,12004,24126,27461,29114,41089,42004,43429,80446,90356,96513,166449,171460,277713,319435,345634,
#Partially deleted in new
chr4	65330560	65670495	chr4:65330560-65670495	1	-	65331968	65669742	789624	17	1568,194,150,210,62,186,126,68,66,106,160,125,336,156,664,65,934,	0,5371,17493,20828,22481,34456,35371,36796,46437,73813,83723,89880,159816,164827,271080,312802,339001,
#Partially deleted in new
chr4	65573458	65574328	chr4:65573458-65574328	7	+	65573458	65573458	16724991	1	870,	0,
#Partially deleted in new
chr4	65669960	65693386	chr4:65669960-65693386	3	+	65669960	65669960	789624	4	713,106,80,278,	0,1815,11307,23148,
#Partially deleted in new
chr4	65670529	65693386	chr4:65670529-65693386	0	+	65670529	65670529	8553170	2	144,278,	0,22579,
#Partially deleted in new
chr4	65670608	65698029	chr4:65670608-65698029	0	+	65670608	65670608	8553170	2	65,81,	0,27340,
#Deleted in new
chr4	65702201	65705553	chr4:65702201-65705553	3	+	65702201	65702201	8553170	2	144,241,	0,3111,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	65807239	65807435	chr4:65807239-65807435	3	-	65807239	65807239	8553170	1	196,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	65858760	65860204	chr4:65858760-65860204	3	+	65858760	65858760	8553170	2	119,649,	0,795,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	65998845	66150012	chr4:65998845-66150012	3	+	65998845	65998845	8553170	4	463,73,79,139,	0,123510,136542,151028,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	66003280	66016792	chr4:66003280-66016792	3	+	66003280	66003280	8553170	2	82,470,	0,13042,
#Deleted in new
chr4	66094141	66094526	chr4:66094141-66094526	7	+	66094141	66094141	16724991	1	385,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	66276823	66276928	chr4:66276823-66276928	3	+	66276823	66276823	5263520	1	105,	0,
#Deleted in new
chr4	66431091	66431521	chr4:66431091-66431521	7	+	66431091	66431091	16724991	1	430,	0,
#Deleted in new
chr4	66897261	66897371	chr4:66897261-66897371	3	+	66897261	66897261	8553170	1	110,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	67417304	67468251	chr4:67417304-67468251	1	-	67417304	67417304	789624	4	1687,161,109,34,	0,3593,4587,50913,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	67418541	67421054	chr4:67418541-67421054	2	-	67418541	67418541	8553170	3	450,156,157,	0,1352,2356,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	67420758	67422000	chr4:67420758-67422000	0	-	67420758	67420758	8553170	2	300,109,	0,1133,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	67429590	67429754	chr4:67429590-67429754	3	-	67429590	67429590	8553170	1	164,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	67439991	67440118	chr4:67439991-67440118	3	+	67439991	67439991	8553170	1	127,	0,
#Partially deleted in new
chr4	67446266	67446574	chr4:67446266-67446574	7	+	67446266	67446266	16724991	1	308,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr4	67468747	67545606	chr4:67468747-67545606	3	-	67472604	67545355	0	19	3928,91,155,96,129,105,54,80,147,292,168,614,213,286,100,95,71,47,269,	0,6140,21219,23432,24121,25136,26411,36457,38040,40066,43654,45326,49408,50469,62067,71092,72232,75401,76590,
#Partially deleted in new
chr4	67472476	67530866	chr4:67472476-67530866	0	-	67492821	67530866	789624	15	199,91,155,96,247,105,54,80,147,292,168,614,213,286,52,	0,2411,17490,19703,20274,21407,22682,32728,34311,36337,39925,41597,45679,46740,58338,
#Partially deleted in new
chr4	67472481	67545483	chr4:67472481-67545483	0	-	67511008	67545355	0	20	194,91,155,96,129,105,54,80,147,292,353,168,614,213,286,100,95,71,47,146,	0,2406,17485,19698,20387,21402,22677,32723,34306,36332,38191,39920,41592,45674,46735,58333,67358,68498,71667,72856,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	67474691	67495201	chr4:67474691-67495201	0	-	67492821	67495201	789624	6	287,155,96,247,105,43,	0,15275,17488,18059,19192,20467,
#Partially deleted in new
chr4	67493404	67545503	chr4:67493404-67545503	0	-	67493404	67493404	8553170	14	584,54,80,147,292,168,614,213,286,100,95,71,47,166,	0,1754,11800,13383,15409,18997,20669,24751,25812,37410,46435,47575,50744,51933,
#Partially deleted in new
chr4	67505029	67508919	chr4:67505029-67508919	0	-	67505029	67505029	8553170	3	255,147,106,	0,1758,3784,
#Partially deleted in new
chr4	67512049	67514245	chr4:67512049-67514245	0	-	67512049	67512049	8553170	2	520,172,	0,2024,
#Partially deleted in new
chr4	67558727	67606898	chr4:67558727-67606898	1	+	67558809	67606357	0	9	202,72,114,57,167,129,70,97,603,	0,12356,16657,18475,22577,24846,32156,34532,47568,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	67558727	67607337	chr4:67558727-67607337	3	+	67558809	67606357	0	10	202,72,114,57,167,129,70,97,94,144,	0,12356,16657,18475,22577,24846,32156,34532,47568,48466,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	67607855	67610313	chr4:67607855-67610313	3	-	67607855	67607855	8553170	1	2458,	0,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr4	67612651	67701179	chr4:67612651-67701179	3	-	67618996	67701119	789624	33	6481,95,88,128,194,118,72,70,64,52,129,81,90,106,182,78,81,79,68,144,67,77,63,104,124,123,81,112,95,29,95,63,131,	0,10179,10483,11474,12342,13708,16419,17814,19056,19205,20693,21590,21777,22801,26291,28499,32046,33286,34072,36416,49537,50487,51233,52537,55899,57818,61045,64959,65787,68911,69467,83993,88397,
#Partially deleted in new
chr4	67618854	67625155	chr4:67618854-67625155	0	-	67622908	67625155	789624	4	278,95,88,162,	0,3976,4280,6139,
#Partially deleted in new
chr4	67630453	67644774	chr4:67630453-67644774	0	-	67630453	67644774	789624	9	82,64,52,81,90,106,182,78,77,	0,1254,1403,3788,3975,4999,8489,10697,14244,
#Deleted in new
chr4	67638176	67638359	chr4:67638176-67638359	7	+	67638176	67638176	16724991	1	183,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	67661662	67701153	chr4:67661662-67701153	1	-	67662122	67701119	789624	13	593,77,63,104,124,123,81,112,95,29,95,63,105,	0,1476,2222,3526,6888,8807,12034,15948,16776,19900,20456,34982,39386,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	67662486	67701148	chr4:67662486-67701148	0	-	67662486	67662486	8553170	11	1461,104,124,123,81,112,95,29,95,63,100,	0,2702,6064,7983,11210,15124,15952,19076,19632,34158,38562,
#Partially deleted in new
chr4	67678429	67701142	chr4:67678429-67701142	0	-	67678429	67678429	8553170	5	104,29,95,63,94,	0,3133,3689,18215,22619,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	67701279	67722505	chr4:67701279-67722505	1	+	67701279	67701279	8553170	3	205,211,1029,	0,19142,20197,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	67701332	67722502	chr4:67701332-67722502	0	+	67701332	67701332	789624	2	152,2081,	0,19089,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	67701360	68080952	chr4:67701360-68080952	3	+	67701360	67701360	8553170	8	124,630,147,97,840,67,615,832,	0,19061,27179,28713,30145,53828,361246,378760,
#Partially deleted in new
chr4	67701394	67721018	chr4:67701394-67721018	0	+	67701394	67701394	8553170	3	90,99,597,	0,15528,19027,
#Deleted in new
chr4	67716374	67717388	chr4:67716374-67717388	7	-	67716374	67716374	16724991	1	1014,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	67718995	67724262	chr4:67718995-67724262	7	-	67718995	67718995	16724991	5	401,1330,37,85,193,	0,931,3604,4387,5074,
#Deleted in new
chr4	67725182	67726395	chr4:67725182-67726395	7	-	67725182	67725182	16724991	1	1213,	0,
#Partially deleted in new
chr4	67732143	67790511	chr4:67732143-67790511	1	+	67732143	67732143	8553170	6	202,34,98,82,67,64,	0,19537,21477,22015,23045,58304,
#Partially deleted in new
chr4	67739327	67754360	chr4:67739327-67754360	3	-	67740479	67754335	789624	3	1397,220,547,	0,5240,14486,
#Partially deleted in new
chr4	67740479	67754335	chr4:67740479-67754335	1	-	67740588	67754335	789624	3	245,92,522,	0,4088,13334,
#Deleted in new
chr4	67747235	67747386	chr4:67747235-67747386	3	+	67747235	67747235	8553170	1	151,	0,
#Partially deleted in new
chr4	67766479	67773854	chr4:67766479-67773854	7	-	67766479	67766479	16724991	4	170,138,241,134,	0,4088,5801,7241,
#Partially deleted in new
chr4	67820875	67884032	chr4:67820875-67884032	3	-	67822336	67883933	789624	10	1623,143,260,178,39,158,68,119,122,107,	0,4856,6385,12328,14207,17296,21682,33192,38681,63050,
#Partially deleted in new
chr4	67820877	67833627	chr4:67820877-67833627	0	-	67820877	67820877	8553170	4	1621,143,260,424,	0,4854,6383,12326,
#Partially deleted in new
chr4	67825806	67838258	chr4:67825806-67838258	0	-	67825806	67838258	789624	3	68,39,87,	0,9276,12365,
#Partially deleted in new
chr4	67827467	67883981	chr4:67827467-67883981	0	-	67827467	67827467	8553170	5	53,178,158,119,56,	0,5736,10704,26600,56458,
#Partially deleted in new
chr4	67833251	67883981	chr4:67833251-67883981	0	-	67833251	67833251	8553170	6	130,39,158,68,119,56,	0,1831,4920,9306,20816,50674,
#Partially deleted in new
chr4	67833301	67884001	chr4:67833301-67884001	0	-	67833301	67833301	8553170	7	39,39,158,43,68,119,76,	0,1781,4870,5714,9256,20766,50624,
#Partially deleted in new
chr4	67838033	67883998	chr4:67838033-67883998	0	-	67838033	67838033	8553170	5	296,68,119,122,73,	0,4524,16034,21523,45892,
#Partially deleted in new
chr4	67838206	67883960	chr4:67838206-67883960	0	-	67838206	67838206	8553170	6	123,68,119,117,50,35,	0,4351,15861,21350,22180,45719,
#Partially deleted in new
chr4	67909384	67963426	chr4:67909384-67963426	1	-	67911341	67963393	789624	10	2119,143,260,172,39,161,68,119,122,44,	0,5203,9588,13370,14743,20495,22608,35134,37065,53998,
#Partially deleted in new
chr4	67910300	67964140	chr4:67910300-67964140	3	-	67911341	67963393	789624	10	1203,143,260,172,39,161,68,128,122,758,	0,4287,8672,12454,13827,19579,21692,34209,36149,53082,
#Partially deleted in new
chr4	67911309	67946564	chr4:67911309-67946564	0	-	67911341	67946564	789624	8	194,143,260,172,161,68,77,115,	0,3278,7663,11445,18570,20683,33209,35140,
#Partially deleted in new
chr4	67991683	68015768	chr4:67991683-68015768	7	-	67991683	67991683	16724991	9	162,134,259,118,54,174,60,119,124,	0,2298,5648,7132,8062,18588,19400,23254,23961,
#Deleted in new
chr4	67991811	67997487	chr4:67991811-67997487	4	-	67991811	67991811	16724991	4	34,134,65,156,	0,2170,2710,5520,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	68003894	68004001	chr4:68003894-68004001	3	+	68003894	68003894	8553170	1	107,	0,
#Deleted in new
chr4	68038543	68039647	chr4:68038543-68039647	7	+	68038543	68038543	16724991	1	1104,	0,
#Deleted in new
chr4	68049705	68050478	chr4:68049705-68050478	7	-	68049705	68049705	16724991	1	773,	0,
#Partially deleted in new
chr4	68053197	68129880	chr4:68053197-68129880	3	-	68053908	68129820	789624	10	870,143,260,202,39,164,68,119,152,71,	0,6128,11487,15420,16771,19125,20744,37325,45689,76612,
#Partially deleted in new
chr4	68061821	68063269	chr4:68061821-68063269	7	-	68061821	68061821	16724991	1	1448,	0,
#Partially deleted in new
chr4	68062547	68063268	chr4:68062547-68063268	5	-	68062547	68062547	16724991	1	721,	0,
#Partially deleted in new
chr4	68063061	68080226	chr4:68063061-68080226	0	+	68063061	68063061	8553170	3	160,143,106,	0,14217,17059,
#Partially deleted in new
chr4	68063082	68080645	chr4:68063082-68080645	0	+	68063082	68063082	8553170	3	139,168,525,	0,14380,17038,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	68182291	68212470	chr4:68182291-68212470	5	+	68182291	68182291	16724991	3	1212,124,165,	0,3468,30014,
#Deleted in new
chr4	68182312	68182783	chr4:68182312-68182783	7	+	68182312	68182312	16724991	1	471,	0,
#Partially deleted in new
chr4	68184080	68217913	chr4:68184080-68217913	7	-	68184080	68184080	16724991	10	174,143,260,173,43,161,66,118,116,8,	0,1286,1893,2909,3599,4343,7170,7326,28281,33825,
#Partially deleted in new
chr4	68184128	68186153	chr4:68184128-68186153	4	-	68184128	68184128	16724991	2	126,180,	0,1845,
#Partially deleted in new
chr4	68184177	68186203	chr4:68184177-68186203	4	-	68184177	68184177	16724991	2	77,230,	0,1796,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	68188402	68218004	chr4:68188402-68218004	4	-	68188402	68188402	16724991	3	354,222,99,	0,17473,29503,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	68188523	68218080	chr4:68188523-68218080	5	-	68188523	68188523	16724991	4	2793,118,116,175,	0,2883,23838,29382,
#Partially deleted in new
chr4	68191020	68218003	chr4:68191020-68218003	4	-	68191020	68191020	16724991	4	296,63,116,98,	0,15014,21341,26885,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	68226652	68245720	chr4:68226652-68245720	3	-	68227910	68245558	789624	10	1420,143,260,178,39,161,68,116,116,170,	0,2089,2604,4550,5725,7810,9349,9498,15036,18898,
#Deleted in new
chr4	68228741	68229678	chr4:68228741-68229678	0	-	68228741	68228741	8553170	2	143,422,	0,515,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	68231832	68245691	chr4:68231832-68245691	0	-	68231832	68231832	8553170	6	584,161,68,116,116,141,	0,2630,4169,4318,9856,13718,
#Partially deleted in new
chr4	68282460	68285959	chr4:68282460-68285959	7	-	68282460	68282460	16724991	3	220,73,145,	0,1344,3354,
#Partially deleted in new
chr4	68293126	68294364	chr4:68293126-68294364	7	+	68293126	68293126	16724991	2	519,281,	0,957,
#Deleted in new
chr4	68300324	68302459	chr4:68300324-68302459	7	+	68300324	68300324	16724991	2	733,135,	0,2000,
#Deleted in new
chr4	68304342	68304939	chr4:68304342-68304939	7	-	68304342	68304342	16724991	1	597,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr4	68310386	68350089	chr4:68310386-68350089	1	-	68314098	68349753	0	17	3937,135,63,40,37,83,167,85,118,109,95,54,90,424,329,102,364,	0,5927,8132,8303,8439,9736,12362,13752,19615,19815,21716,22407,22921,26640,27185,27896,39339,
#Partially deleted in new
chr4	68313320	68350089	chr4:68313320-68350089	3	-	68314098	68349753	0	16	1003,135,63,40,37,83,167,85,118,109,95,90,424,329,102,364,	0,2993,5198,5369,5505,6802,9428,10818,16681,16881,18782,19987,23706,24251,24962,36405,
#Partially deleted in new
chr4	68313323	68349753	chr4:68313323-68349753	1	-	68314098	68349753	789624	17	1000,135,63,64,37,83,167,85,118,109,95,54,90,424,329,102,28,	0,2990,5195,5366,5502,6799,9425,10815,16678,16878,18779,19470,19984,23703,24248,24959,36402,
#Partially deleted in new
chr4	68315854	68318721	chr4:68315854-68318721	0	-	68316262	68318721	789624	3	594,63,32,	0,2664,2835,
#Partially deleted in new
chr4	68322491	68330073	chr4:68322491-68330073	0	-	68322491	68322491	8553170	3	424,85,72,	0,1647,7510,
#Deleted in new
chr4	68337765	68338412	chr4:68337765-68338412	0	-	68337765	68337877	789624	2	135,130,	0,517,
#Partially deleted in new
chr4	68337839	68350045	chr4:68337839-68350045	0	-	68337839	68337877	789624	4	61,102,32,320,	0,443,6209,11886,
#Deleted in new
chr4	68376322	68376505	chr4:68376322-68376505	7	+	68376322	68376322	16724991	1	183,	0,
#Partially deleted in new
chr4	68447448	68497604	chr4:68447448-68497604	3	+	68447512	68496804	0	10	75,125,122,68,164,39,178,260,143,962,	0,14372,19182,21430,24011,27274,28812,29920,31400,49194,
#Partially deleted in new
chr4	68461820	68477630	chr4:68461820-68477630	0	+	68461820	68476282	789624	6	125,122,68,39,178,262,	0,4810,7058,12902,14440,15548,
#Partially deleted in new
chr4	68509440	68517647	chr4:68509440-68517647	7	-	68509440	68509440	16724991	2	234,739,	0,7468,
#Partially deleted in new
chr4	68537183	68568527	chr4:68537183-68568527	3	-	68537624	68568484	789624	6	721,220,88,132,149,767,	0,13493,14640,23353,28388,30577,
#Deleted in new
chr4	68614418	68615013	chr4:68614418-68615013	7	+	68614418	68614418	16724991	1	595,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	68615392	68616137	chr4:68615392-68616137	7	-	68615392	68615392	16724991	1	745,	0,
#Deleted in new
chr4	68626846	68628899	chr4:68626846-68628899	7	-	68626846	68626846	16724991	2	136,715,	0,1338,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	68646629	68670628	chr4:68646629-68670628	3	-	68647103	68670618	789624	6	754,220,88,132,149,734,	0,7407,8465,16378,21410,23265,
#Partially deleted in new
chr4	68704599	68712498	chr4:68704599-68712498	7	-	68704599	68704599	16724991	4	275,208,81,186,	0,4048,5440,7713,
#Partially deleted in new
chr4	68784617	68787474	chr4:68784617-68787474	7	+	68784617	68784617	16724991	4	132,89,218,275,	0,1432,1913,2582,
#Partially deleted in new
chr4	68813994	68814727	chr4:68813994-68814727	7	+	68813994	68813994	16724991	1	733,	0,
#Partially deleted in new
chr4	68815992	68831196	chr4:68815992-68831196	3	+	68816019	68830879	789624	6	745,149,132,88,220,597,	0,2036,6278,10417,11336,14607,
#Partially deleted in new
chr4	68815994	68830943	chr4:68815994-68830943	1	+	68816019	68830879	789624	6	491,149,132,88,220,344,	0,2034,6276,10415,11334,14605,
#Partially deleted in new
chr4	68834212	68834368	chr4:68834212-68834368	7	-	68834212	68834212	16724991	1	156,	0,
#Partially deleted in new
chr4	68861331	68861610	chr4:68861331-68861610	7	-	68861331	68861331	16724991	1	279,	0,
#Partially deleted in new
chr4	68877625	68880131	chr4:68877625-68880131	7	-	68877625	68877625	16724991	2	265,226,	0,2280,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	68883884	68884440	chr4:68883884-68884440	7	-	68883884	68883884	16724991	1	556,	0,
#Partially deleted in new
chr4	68900650	68900910	chr4:68900650-68900910	7	-	68900650	68900650	16724991	1	260,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	68901007	68906983	chr4:68901007-68906983	3	-	68901007	68901007	8553170	2	368,109,	0,5867,
#Partially deleted in new
chr4	68907917	68908034	chr4:68907917-68908034	7	-	68907917	68907917	16724991	1	117,	0,
#Partially deleted in new
chr4	68914927	68924741	chr4:68914927-68924741	7	-	68914927	68914927	16724991	4	274,224,88,130,	0,5235,6297,9684,
#Partially deleted in new
chr4	68928462	68951791	chr4:68928462-68951791	3	-	68929812	68951760	789624	6	1630,220,88,132,149,746,	0,2083,2692,4165,16843,22583,
#Partially deleted in new
chr4	68929449	68951361	chr4:68929449-68951361	0	-	68943321	68951358	789624	7	643,220,88,132,97,149,316,	0,1096,1705,3178,13832,15856,21596,
#Partially deleted in new
chr4	68972998	68975993	chr4:68972998-68975993	7	-	68972998	68972998	16724991	4	277,214,82,133,	0,789,1401,2862,
#Partially deleted in new
chr4	68985008	68988533	chr4:68985008-68988533	7	-	68985008	68985008	16724991	3	237,223,85,	0,2333,3440,
#Partially deleted in new
chr4	68996934	68997709	chr4:68996934-68997709	7	-	68996934	68996934	16724991	1	775,	0,
#Partially deleted in new
chr4	69004861	69020414	chr4:69004861-69020414	7	-	69004861	69004861	16724991	6	274,220,88,139,148,751,	0,3999,5055,9162,13380,14802,
#Partially deleted in new
chr4	69021655	69022340	chr4:69021655-69022340	7	-	69021655	69021655	16724991	1	685,	0,
#Partially deleted in new
chr4	69027830	69044578	chr4:69027830-69044578	7	+	69027830	69027830	16724991	6	729,154,135,93,227,275,	0,2294,7511,10393,11332,16473,
#Partially deleted in new
chr4	69066394	69069888	chr4:69066394-69069888	7	+	69066394	69066394	16724991	3	86,217,247,	0,1008,3247,
#Partially deleted in new
chr4	69096474	69112987	chr4:69096474-69112987	3	+	69096520	69112736	0	6	767,149,132,88,220,531,	0,2065,6332,10700,11628,15982,
#Partially deleted in new
chr4	69096493	69112972	chr4:69096493-69112972	1	+	69096520	69112476	789624	5	748,149,132,88,516,	0,2046,6313,10681,15963,
#Partially deleted in new
chr4	69096518	69112984	chr4:69096518-69112984	1	+	69096520	69112462	789624	4	723,149,132,528,	0,2021,6288,15938,
#Partially deleted in new
chr4	69125273	69126451	chr4:69125273-69126451	7	+	69125273	69125273	16724991	1	1178,	0,
#Partially deleted in new
chr4	69131350	69134814	chr4:69131350-69134814	7	+	69131350	69131350	16724991	3	87,221,268,	0,972,3196,
#Partially deleted in new
chr4	69144733	69147671	chr4:69144733-69147671	7	+	69144733	69144733	16724991	4	130,88,220,271,	0,1518,1989,2667,
#Partially deleted in new
chr4	69181659	69182372	chr4:69181659-69182372	7	+	69181659	69181659	16724991	1	713,	0,
#Partially deleted in new
chr4	69199950	69214731	chr4:69199950-69214731	3	-	69200439	69214722	789624	6	769,220,88,132,149,730,	0,4479,5529,8400,12622,14051,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	69200419	69216766	chr4:69200419-69216766	1	+	69200419	69200419	8553170	4	159,113,82,2294,	0,752,10646,14053,
#Partially deleted in new
chr4	69204303	69205693	chr4:69204303-69205693	0	-	69204303	69204303	8553170	2	346,214,	0,1176,
#Partially deleted in new
chr4	69215907	69216635	chr4:69215907-69216635	7	-	69215907	69215907	16724991	1	728,	0,
#Partially deleted in new
chr4	69242627	69250815	chr4:69242627-69250815	7	+	69242627	69242627	16724991	5	709,133,67,223,283,	0,5334,6786,7236,7905,
#Partially deleted in new
chr4	69280498	69295050	chr4:69280498-69295050	3	+	69280500	69294809	789624	6	723,149,132,88,220,521,	0,2015,6253,9166,10093,14031,
#Partially deleted in new
chr4	69280498	69295050	chr4:69280498-69295050	1	+	69280500	69294535	789624	4	723,149,132,521,	0,2015,6253,14031,
#Partially deleted in new
chr4	69306468	69307173	chr4:69306468-69307173	7	-	69306468	69306468	16724991	1	705,	0,
#Partially deleted in new
chr4	69346608	69358177	chr4:69346608-69358177	7	+	69346608	69346608	16724991	5	714,128,88,219,277,	0,8713,10152,10629,11292,
#Deleted in new
chr4	69387579	69388307	chr4:69387579-69388307	7	+	69387579	69387579	16724991	1	728,	0,
#Deleted in new
chr4	69389491	69402081	chr4:69389491-69402081	7	+	69389491	69389491	16724991	6	719,149,132,88,220,278,	0,1971,6202,9115,10040,12312,
#Deleted in new
chr4	69406930	69407655	chr4:69406930-69407655	7	+	69406930	69406930	16724991	1	725,	0,
#Partially deleted in new
chr4	69408827	69423164	chr4:69408827-69423164	7	+	69408827	69408827	16724991	6	730,149,132,88,220,278,	0,2021,6257,9190,10118,14059,
#Partially deleted in new
chr4	69437356	69441050	chr4:69437356-69441050	7	+	69437356	69437356	16724991	3	85,226,178,	0,975,3516,
#Deleted in new
chr4	69450013	69451613	chr4:69450013-69451613	7	+	69450013	69450013	16724991	2	133,103,	0,1497,
#Partially deleted in new
chr4	69480164	69495908	chr4:69480164-69495908	3	-	69480633	69495861	789624	6	746,220,88,132,149,768,	0,5043,6444,9274,13528,14976,
#Partially deleted in new
chr4	69480164	69495861	chr4:69480164-69495861	1	-	69480890	69495861	789624	5	746,88,132,149,721,	0,6444,9274,13528,14976,
#Partially deleted in new
chr4	69480329	69495895	chr4:69480329-69495895	0	-	69480329	69480329	8553170	5	581,88,132,149,503,	0,6279,9109,13363,15063,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	69485207	69526014	chr4:69485207-69526014	0	-	69485207	69485207	8553170	6	220,88,132,149,270,328,	0,1401,4231,8485,9933,40479,
#Deleted in new
chr4	69486560	69495908	chr4:69486560-69495908	1	-	69486560	69495861	789624	5	13,92,132,149,768,	0,44,2878,7132,8580,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	69489477	69526014	chr4:69489477-69526014	0	-	69489477	69489477	8553170	3	93,149,328,	0,4215,36209,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	69495698	69526014	chr4:69495698-69526014	0	-	69495698	69495861	789624	2	268,328,	0,29988,
#Partially deleted in new
chr4	69517666	69518400	chr4:69517666-69518400	7	-	69517666	69517666	16724991	1	734,	0,
#Partially deleted in new
chr4	69572390	69585527	chr4:69572390-69585527	7	-	69572390	69572390	16724991	6	262,223,90,134,148,761,	0,1951,4553,5480,8078,12376,
#Partially deleted in new
chr4	69588416	69647700	chr4:69588416-69647700	3	-	69589371	69647644	789624	6	1235,220,88,132,149,771,	0,6060,6745,7833,10829,58513,
#Partially deleted in new
chr4	69588421	69647761	chr4:69588421-69647761	1	-	69589371	69647644	789624	5	1230,220,88,149,832,	0,6055,6740,10824,58508,
#Partially deleted in new
chr4	69589193	69653249	chr4:69589193-69653249	1	-	69589371	69647644	789624	7	458,220,88,149,630,769,62,	0,5283,5968,10052,49705,57736,63994,
#Partially deleted in new
chr4	69589308	69639642	chr4:69589308-69639642	1	-	69589371	69639640	789624	5	343,220,88,149,744,	0,5168,5853,9937,49590,
#Partially deleted in new
chr4	69589308	69639642	chr4:69589308-69639642	3	-	69589371	69639640	789624	6	343,220,88,132,149,744,	0,5168,5853,6941,9937,49590,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	69589371	69653247	chr4:69589371-69653247	1	-	69589371	69647644	789624	7	280,220,88,149,132,769,60,	0,5105,5790,9874,46319,57558,63816,
#Partially deleted in new
chr4	69589606	69603613	chr4:69589606-69603613	0	-	69589606	69589606	8553170	5	45,220,88,149,72,	0,4870,5555,9639,13935,
#Partially deleted in new
chr4	69596316	69599761	chr4:69596316-69599761	0	-	69596316	69596316	8553170	2	65,516,	0,2929,
#Partially deleted in new
chr4	69647169	69653247	chr4:69647169-69653247	0	-	69647169	69647644	789624	2	526,60,	0,6018,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	69721161	69760712	chr4:69721161-69760712	3	-	69727087	69755217	0	8	6039,181,95,127,98,129,192,254,	0,9339,12251,12976,28559,33508,33908,39297,
#Partially deleted in new
chr4	69734172	69760598	chr4:69734172-69760598	0	-	69734172	69755217	789624	6	92,98,129,192,43,140,	0,15548,20497,20897,26035,26286,
#Partially deleted in new
chr4	69791871	69813888	chr4:69791871-69813888	7	-	69791871	69791871	16724991	7	110,181,95,127,93,126,150,	0,2405,5834,8885,17958,18870,21867,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	69810779	69847786	chr4:69810779-69847786	3	-	69841993	69847786	789624	6	88,125,116,117,181,89,	0,27668,30651,31210,33381,36918,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	69841211	69860152	chr4:69841211-69860152	3	-	69841993	69857644	0	8	895,181,95,127,98,126,154,104,	0,2949,6486,8225,13005,14089,16288,18837,
#Partially deleted in new
chr4	69849125	69860145	chr4:69849125-69860145	0	-	69849125	69849125	8553170	5	438,98,126,154,97,	0,5091,6175,8374,10923,
#Deleted in new
chr4	69888876	69889406	chr4:69888876-69889406	7	+	69888876	69888876	16724991	1	530,	0,
#Partially deleted in new
chr4	69931080	69946574	chr4:69931080-69946574	3	+	69932555	69946196	789624	16	37,63,33,21,24,24,42,24,24,33,24,42,18,42,155,379,	0,1463,3131,3609,4845,5375,5485,6040,6719,8095,8940,9938,10965,11455,13769,15115,
#Partially deleted in new
chr4	69932544	69946251	chr4:69932544-69946251	1	+	69932555	69946196	789624	14	62,33,21,24,24,39,24,24,33,42,18,42,155,56,	0,1667,2145,3381,3911,4024,4576,5255,6631,8474,9501,9991,12305,13651,
#Partially deleted in new
chr4	69932555	69946557	chr4:69932555-69946557	1	+	69932555	69946196	789624	13	51,33,21,24,24,42,24,33,42,18,42,155,362,	0,1656,2134,3370,3900,4010,5244,6620,8463,9490,9980,12294,13640,
#Partially deleted in new
chr4	69932555	69946557	chr4:69932555-69946557	1	+	69932555	69946196	789624	14	51,33,21,24,24,42,24,24,33,42,18,42,155,362,	0,1656,2134,3370,3900,4010,4565,5244,6620,8463,9490,9980,12294,13640,
#Partially deleted in new
chr4	69936565	69941060	chr4:69936565-69941060	0	+	69936565	69941060	789624	5	42,24,33,24,42,	0,1234,2610,3455,4453,
#Partially deleted in new
chr4	69939175	69946561	chr4:69939175-69946561	0	+	69939175	69946196	789624	4	33,42,155,366,	0,3360,5674,7020,
#Partially deleted in new
chr4	69955255	69961007	chr4:69955255-69961007	3	-	69956349	69960995	789624	7	337,42,531,45,21,27,63,	0,1058,2018,3653,3793,4797,5689,
#Partially deleted in new
chr4	69995929	70002453	chr4:69995929-70002453	1	+	69998437	70000949	789624	6	96,66,21,30,120,265,	0,2493,3737,3850,4933,6259,
#Partially deleted in new
chr4	69995930	70002454	chr4:69995930-70002454	3	+	69998437	70000949	789624	6	95,66,21,30,120,266,	0,2492,3736,3849,4932,6258,
#Partially deleted in new
chr4	69995965	70002455	chr4:69995965-70002455	1	+	69998437	70000949	789624	5	60,66,21,120,267,	0,2457,3701,4897,6223,
#Partially deleted in new
chr4	69995965	69999144	chr4:69995965-69999144	0	+	69995965	69995965	8553170	2	60,722,	0,2457,
#Partially deleted in new
chr4	69995965	70000367	chr4:69995965-70000367	0	+	69995965	69995965	8553170	4	60,66,21,588,	0,2457,3701,3814,
#Partially deleted in new
chr4	69995968	70000351	chr4:69995968-70000351	0	+	69995968	69995968	8553170	3	57,66,685,	0,2454,3698,
#Deleted in new
chr4	69998349	70000172	chr4:69998349-70000172	0	+	69998349	69998349	8553170	2	139,506,	0,1317,
#Deleted in new
chr4	70000780	70002570	chr4:70000780-70002570	0	+	70000780	70000780	8553170	2	202,382,	0,1408,
#Partially deleted in new
chr4	70028412	70036538	chr4:70028412-70036538	3	+	70030740	70033220	789624	6	104,64,21,30,87,272,	0,2315,3566,3665,4754,7854,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	70028454	70034412	chr4:70028454-70034412	1	+	70030740	70033220	789624	6	62,64,21,30,87,511,	0,2273,3524,3623,4712,5447,
#Partially deleted in new
chr4	70028458	70036529	chr4:70028458-70036529	1	+	70030740	70033220	789624	5	58,64,21,87,263,	0,2269,3520,4708,7808,
#Deleted in new
chr4	70028458	70031408	chr4:70028458-70031408	0	+	70028458	70028458	8553170	2	58,681,	0,2269,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	70028458	70033546	chr4:70028458-70033546	0	+	70028458	70028458	8553170	4	58,64,129,380,	0,2269,3520,4708,
#Partially deleted in new
chr4	70028458	70036527	chr4:70028458-70036527	0	+	70028458	70028458	8553170	5	58,64,129,87,261,	0,2269,3520,4708,7808,
#Partially deleted in new
chr4	70050401	70058845	chr4:70050401-70058845	3	+	70053076	70055569	789624	6	94,64,21,30,105,266,	0,2662,3920,4019,5096,8178,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	70050437	70055844	chr4:70050437-70055844	0	+	70050437	70050437	8553170	4	58,64,129,347,	0,2626,3884,5060,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	70050437	70055947	chr4:70050437-70055947	1	+	70053076	70055569	789624	5	58,64,21,30,450,	0,2626,3884,3983,5060,
#Partially deleted in new
chr4	70050441	70058841	chr4:70050441-70058841	1	+	70053076	70055569	789624	6	54,64,21,30,105,262,	0,2622,3880,3979,5056,8138,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	70052881	70058845	chr4:70052881-70058845	0	+	70052881	70052881	8553170	3	246,129,3348,	0,1440,2616,
#Partially deleted in new
chr4	70067385	70085273	chr4:70067385-70085273	7	+	70067385	70067385	16724991	13	44,63,30,24,27,27,24,45,24,24,124,46,277,	0,1666,3040,3844,5145,5619,6730,6838,11368,12341,14077,15295,17611,
#Deleted in new
chr4	70069063	70071232	chr4:70069063-70071232	5	+	70069063	70069063	16724991	3	51,30,3,	0,1362,2166,
#Partially deleted in new
chr4	70069082	70085120	chr4:70069082-70085120	4	+	70069082	70069082	16724991	10	32,30,27,24,45,24,24,124,46,124,	0,1343,3448,5033,5141,9671,10644,12380,13598,15914,
#Partially deleted in new
chr4	70074025	70085290	chr4:70074025-70085290	5	+	70074025	70074025	16724991	7	114,45,24,24,124,46,294,	0,198,4728,5701,7437,8655,10971,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	70152075	70164935	chr4:70152075-70164935	3	+	70154375	70161597	789624	6	62,62,24,573,45,2241,	0,2289,3978,6252,9510,10619,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	70154186	70164939	chr4:70154186-70164939	1	+	70154375	70161597	789624	5	240,24,573,45,2245,	0,1867,4141,7399,8508,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	70154242	70166606	chr4:70154242-70166606	0	+	70154375	70154775	789624	6	184,46,24,573,45,3912,	0,503,1811,4085,7343,8452,
#Partially deleted in new
chr4	70158727	70176799	chr4:70158727-70176799	0	+	70158727	70161597	789624	6	173,45,283,41,42,57,	0,2858,3967,7030,7918,18015,
#Partially deleted in new
chr4	70196495	70204576	chr4:70196495-70204576	3	+	70196543	70203185	789624	11	99,42,48,234,48,105,48,72,162,59,402,	0,196,778,1428,2083,4001,4958,5762,6260,6660,7679,
#Partially deleted in new
chr4	70196524	70202910	chr4:70196524-70202910	0	+	70196543	70202910	789624	8	70,48,234,48,105,48,72,155,	0,749,1399,2054,3972,4929,5733,6231,
#Deleted in new
chr4	70197728	70200573	chr4:70197728-70200573	0	+	70197728	70197728	8553170	3	429,48,77,	0,850,2768,
#Partially deleted in new
chr4	70197923	70203214	chr4:70197923-70203214	0	+	70197923	70203185	789624	6	234,48,105,72,162,59,	0,655,2573,4334,4832,5232,
#Partially deleted in new
chr4	70198121	70204201	chr4:70198121-70204201	0	+	70198121	70200110	789624	9	36,48,48,105,48,72,162,59,27,	0,457,1980,2375,3332,4136,4634,5034,6053,
#Partially deleted in new
chr4	70226070	70235252	chr4:70226070-70235252	3	+	70231194	70234187	789624	5	112,57,33,196,168,	0,5124,6923,7949,9014,
#Partially deleted in new
chr4	70242587	70251428	chr4:70242587-70251428	3	+	70244819	70249459	789624	5	78,62,33,496,167,	0,2224,5230,6410,8674,
#Deleted in new
chr4	70334965	70337116	chr4:70334965-70337116	3	+	70335039	70336227	789624	2	1381,151,	0,2000,
#Partially deleted in new
chr4	70360760	70367158	chr4:70360760-70367158	3	+	70362115	70366994	789624	3	82,68,515,	0,1341,5883,
#Partially deleted in new
chr4	70370092	70389906	chr4:70370092-70389906	3	+	70384510	70389848	789624	4	125,52,68,244,	0,13068,14404,19570,
#Partially deleted in new
chr4	70383077	70390244	chr4:70383077-70390244	1	+	70384510	70389848	789624	3	135,68,582,	0,1419,6585,
#Partially deleted in new
chr4	70383077	70390242	chr4:70383077-70390242	1	+	70384510	70389848	789624	3	135,68,580,	0,1419,6585,
#Deleted in new
chr4	70383130	70385090	chr4:70383130-70385090	0	+	70383130	70383130	8553170	2	82,594,	0,1366,
#Partially deleted in new
chr4	70397881	70410194	chr4:70397881-70410194	3	+	70399285	70410075	789624	3	159,66,815,	0,1389,11498,
#Partially deleted in new
chr4	70397930	70409892	chr4:70397930-70409892	0	+	70397930	70397930	8553170	4	110,66,56,513,	0,1340,1581,11449,
#Partially deleted in new
chr4	70397964	70409908	chr4:70397964-70409908	0	+	70397964	70397964	8553170	2	76,529,	0,11415,
#Partially deleted in new
chr4	70430491	70482996	chr4:70430491-70482996	3	+	70474021	70481878	789624	4	196,77,69,2198,	0,41723,43515,50307,
#Partially deleted in new
chr4	70430491	70474018	chr4:70430491-70474018	0	+	70430491	70430491	8553170	3	196,77,12,	0,41723,43515,
#Partially deleted in new
chr4	70471957	70482996	chr4:70471957-70482996	1	+	70474021	70481878	789624	4	135,77,69,2198,	0,257,2049,8841,
#Partially deleted in new
chr4	70471957	70481152	chr4:70471957-70481152	0	+	70474021	70481152	789624	4	135,77,69,354,	0,257,2049,8841,
#Partially deleted in new
chr4	70472012	70481025	chr4:70472012-70481025	0	+	70472012	70472012	8553170	3	279,69,227,	0,1994,8786,
#Partially deleted in new
chr4	70472116	70482997	chr4:70472116-70482997	1	+	70474021	70481878	789624	3	175,69,2199,	0,1890,8682,
#Partially deleted in new
chr4	70472196	70481278	chr4:70472196-70481278	0	+	70472196	70472196	8553170	2	95,480,	0,8602,
#Partially deleted in new
chr4	70518539	70532742	chr4:70518539-70532742	3	+	70518777	70532465	789624	9	115,69,84,66,90,36,27,262,288,	0,223,4215,5328,6332,10183,10644,12499,13915,
#Partially deleted in new
chr4	70518584	70532514	chr4:70518584-70532514	1	+	70518777	70532465	789624	9	70,69,81,66,90,36,27,262,60,	0,178,4173,5283,6287,10138,10599,12454,13870,
#Partially deleted in new
chr4	70592255	70607288	chr4:70592255-70607288	3	+	70592358	70606730	789624	13	118,69,51,48,111,237,39,39,39,60,45,45,1104,	0,1071,4743,6100,7280,9162,10368,10542,10716,11004,11160,11621,13929,
#Partially deleted in new
chr4	70592257	70607285	chr4:70592257-70607285	1	+	70592358	70606730	789624	14	116,69,51,48,111,237,4,32,39,39,60,45,45,1101,	0,1069,4741,6098,7278,9160,9646,10373,10540,10714,11002,11158,11619,13927,
#Partially deleted in new
chr4	70592294	70606879	chr4:70592294-70606879	1	+	70592358	70606730	789624	13	79,69,51,48,111,192,39,39,39,60,45,45,695,	0,1032,4704,6061,7241,9168,10329,10503,10677,10965,11121,11582,13890,
#Partially deleted in new
chr4	70628743	70646824	chr4:70628743-70646824	3	+	70629500	70644855	789624	9	221,114,69,45,42,261,63,54,4810,	0,697,2926,3105,3907,5564,7088,9046,13271,
#Partially deleted in new
chr4	70637661	70642389	chr4:70637661-70642389	0	+	70642080	70642389	8553170	2	182,375,	0,4353,
#Partially deleted in new
chr4	70637744	70686816	chr4:70637744-70686816	0	+	70637744	70637744	8553170	4	99,95,101,210,	0,24384,43754,48862,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	70654613	70663534	chr4:70654613-70663534	0	+	70654613	70654613	8553170	3	155,95,154,	0,7515,8767,
#Partially deleted in new
chr4	70655540	70666660	chr4:70655540-70666660	3	-	70656328	70666490	789624	4	999,81,124,234,	0,1670,6551,10886,
#Partially deleted in new
chr4	70655543	70666631	chr4:70655543-70666631	1	-	70656328	70666490	789624	4	996,81,124,205,	0,1667,6548,10883,
#Partially deleted in new
chr4	70656319	70666975	chr4:70656319-70666975	1	-	70656328	70666490	789624	5	220,81,124,88,127,	0,891,5772,10107,10529,
#Partially deleted in new
chr4	70656362	70666884	chr4:70656362-70666884	0	-	70656362	70666490	789624	6	177,81,124,27,88,36,	0,848,5729,9497,10064,10486,
#Partially deleted in new
chr4	70657268	70681817	chr4:70657268-70681817	0	-	70657268	70666490	789624	4	23,124,88,40,	0,4823,9158,24509,
#Deleted in new
chr4	70688478	70690551	chr4:70688478-70690551	3	+	70688677	70690117	789624	1	2073,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	70701754	70701858	chr4:70701754-70701858	3	+	70701754	70701754	8553170	1	104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	70703017	70703123	chr4:70703017-70703123	3	-	70703017	70703017	8553170	1	106,	0,
#Deleted in new
chr4	70703746	70704491	chr4:70703746-70704491	3	-	70703746	70703746	8553170	1	745,	0,
#Deleted in new
chr4	70704203	70705230	chr4:70704203-70705230	0	+	70704936	70705230	789624	2	145,337,	0,690,
#Partially deleted in new
chr4	70704423	70768622	chr4:70704423-70768622	0	+	70762532	70768622	789624	5	52,174,118,102,85,	0,58095,59128,60051,64114,
#Partially deleted in new
chr4	70704800	70790082	chr4:70704800-70790082	1	+	70704936	70789596	789624	12	494,174,118,102,124,62,66,70,93,84,168,588,	0,57718,58751,59674,63737,68710,70367,73568,78290,79995,84005,84694,
#Partially deleted in new
chr4	70721994	70807315	chr4:70721994-70807315	3	+	70722573	70806659	789624	18	757,174,118,102,124,62,66,70,93,84,168,98,120,100,65,28,69,800,	0,40524,41557,42480,46543,51516,53173,56374,61096,62801,66811,67500,71790,72800,78146,80961,82353,84521,
#Partially deleted in new
chr4	70722010	70793557	chr4:70722010-70793557	1	+	70722573	70791297	789624	13	741,174,118,102,124,62,66,70,93,84,168,98,2333,	0,40508,41541,42464,46527,51500,53157,56358,61080,62785,66795,67484,69214,
#Partially deleted in new
chr4	70734345	70775206	chr4:70734345-70775206	0	+	70762532	70775206	789624	7	248,174,118,102,124,62,39,	0,28173,29206,30129,34192,39165,40822,
#Partially deleted in new
chr4	70734433	70807102	chr4:70734433-70807102	1	+	70741661	70806659	789624	19	160,54,174,118,102,124,62,66,70,93,84,168,98,120,100,65,28,69,587,	0,7193,28085,29118,30041,34104,39077,40734,43935,48657,50362,54372,55061,59351,60361,65707,68522,69914,72082,
#Partially deleted in new
chr4	70784865	70800182	chr4:70784865-70800182	0	+	70784865	70794811	789624	6	14,168,98,140,100,42,	0,3940,4629,8899,9929,15275,
#Partially deleted in new
chr4	70788938	70806871	chr4:70788938-70806871	0	+	70788938	70800180	789624	5	35,98,65,28,356,	0,556,11202,14017,17577,
#Partially deleted in new
chr4	70793875	70806816	chr4:70793875-70806816	0	+	70793875	70793875	8553170	4	29,100,65,301,	0,919,6265,12640,
#Partially deleted in new
chr4	70794672	70806567	chr4:70794672-70806567	0	+	70794672	70794672	8553170	5	222,65,28,69,52,	0,5468,8283,9675,11843,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	70799404	70806748	chr4:70799404-70806748	0	+	70799404	70799404	8553170	5	471,65,28,69,233,	0,736,3551,4943,7111,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	70799447	70806553	chr4:70799447-70806553	0	+	70799447	70799447	8553170	4	758,28,69,38,	0,3508,4900,7068,
#Partially deleted in new
chr4	70802870	70806596	chr4:70802870-70806596	0	+	70802870	70802870	8553170	3	306,69,81,	0,1477,3645,
#Partially deleted in new
chr4	70802982	70806794	chr4:70802982-70806794	0	+	70802982	70802982	8553170	2	77,279,	0,3533,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	70815781	70839945	chr4:70815781-70839945	3	-	70824318	70839827	0	10	5080,75,136,122,185,136,144,156,157,475,	0,8512,9514,10342,12070,15757,16525,17336,20376,23689,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	70819530	70839897	chr4:70819530-70839897	0	-	70819530	70819530	8553170	9	1331,75,950,185,136,144,156,157,427,	0,4763,5765,8321,12008,12776,13587,16627,19940,
#Partially deleted in new
chr4	70819532	70839880	chr4:70819532-70839880	1	-	70824318	70839827	789624	11	1329,75,136,122,185,136,144,156,157,83,159,	0,4761,5763,6591,8319,12006,12774,13585,16625,19938,20189,
#Partially deleted in new
chr4	70819757	70839503	chr4:70819757-70839503	0	-	70824318	70839503	789624	10	1104,75,136,122,185,136,144,156,157,276,	0,4536,5538,6366,8094,11781,12549,13360,16400,19470,
#Partially deleted in new
chr4	70820311	70839001	chr4:70820311-70839001	1	-	70824318	70836185	0	10	550,75,136,122,185,136,144,156,157,133,	0,3982,4984,5812,7540,11227,11995,12806,15846,18557,
#Partially deleted in new
chr4	70820374	70839343	chr4:70820374-70839343	0	-	70824318	70839343	789624	10	487,75,136,122,185,136,144,156,157,167,	0,3919,4921,5749,7477,11164,11932,12743,15783,18802,
#Partially deleted in new
chr4	70820698	70833217	chr4:70820698-70833217	0	-	70827935	70833217	789624	7	163,75,136,122,185,144,100,	0,3595,4597,5425,7153,11608,12419,
#Partially deleted in new
chr4	70820745	70839373	chr4:70820745-70839373	0	-	70820745	70820745	8553170	3	116,157,146,	0,15412,18482,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	70848135	70848218	chr4:70848135-70848218	3	-	70848135	70848135	8553170	1	83,	0,
#Partially deleted in new
chr4	70902325	70975254	chr4:70902325-70975254	0	+	70950782	70975254	789624	6	225,60,112,167,94,102,	0,40497,48374,56548,67605,72827,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	70902335	70988168	chr4:70902335-70988168	3	+	70902536	70982057	789624	6	215,167,94,134,164,6189,	0,56538,67595,72817,76792,79644,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	70902346	70976743	chr4:70902346-70976743	0	+	70902346	70902346	8553170	4	204,167,94,1591,	0,56527,67584,72806,
#Partially deleted in new
chr4	70902377	70982242	chr4:70902377-70982242	1	+	70950782	70982057	789624	7	173,112,167,94,134,164,263,	0,48322,56496,67553,72775,76750,79602,
#Partially deleted in new
chr4	70902383	71022449	chr4:70902383-71022449	0	+	70902383	70902383	8553170	5	167,167,94,116,83,	0,56490,67547,95683,119983,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	70992537	70993880	chr4:70992537-70993880	0	+	70993835	70993880	789624	3	54,225,149,	0,316,1194,
#Partially deleted in new
chr4	70993438	71030914	chr4:70993438-71030914	3	+	70993835	71029378	0	7	488,116,194,148,116,91,1563,	0,4628,28928,30120,32377,33226,35913,
#Partially deleted in new
chr4	70993562	71030914	chr4:70993562-71030914	0	+	70993835	70993982	789624	7	455,116,194,148,116,91,1563,	0,4504,28804,29996,32253,33102,35789,
#Partially deleted in new
chr4	70993637	71030914	chr4:70993637-71030914	1	+	70993835	71026715	789624	6	289,116,194,148,91,1563,	0,4429,28729,29921,33027,35714,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	70993637	71030914	chr4:70993637-71030914	1	+	70993835	71029452	789624	8	289,116,194,148,116,91,97,1563,	0,4429,28729,29921,32178,33027,34985,35714,
#Deleted in new
chr4	71025883	71026799	chr4:71025883-71026799	0	+	71025883	71025883	8553170	2	48,135,	0,781,
#Partially deleted in new
chr4	71062666	71568595	chr4:71062666-71568595	3	+	71236576	71567047	789624	27	122,63,74,180,136,161,180,77,158,88,155,114,175,134,272,71,192,114,162,179,73,69,174,162,97,80,808,	0,30063,173909,192553,276703,287245,294341,334910,377949,384979,387722,388521,390828,403777,410032,424281,434834,469395,471560,483683,484981,492473,495045,497426,501126,504337,505121,
#Partially deleted in new
chr4	71186756	71569717	chr4:71186756-71569717	1	+	71236576	71567047	0	26	645,74,180,136,161,180,77,158,88,155,114,175,134,272,71,192,114,162,179,73,69,174,162,97,80,1930,	0,49819,68463,152613,163155,170251,210820,253859,260889,263632,264431,266738,279687,285942,300191,310744,345305,347470,359593,360891,368383,370955,373336,377036,380247,381031,
#Partially deleted in new
chr4	71187285	71572087	chr4:71187285-71572087	1	+	71236576	71567893	0	25	116,74,180,136,161,180,77,158,88,155,114,175,134,272,71,192,114,162,179,73,69,174,162,80,4300,	0,49290,67934,152084,162626,169722,210291,253330,260360,263103,263902,266209,279158,285413,299662,310215,344776,346941,359064,360362,367854,370426,372807,379718,380502,
#Partially deleted in new
chr4	71187326	71568458	chr4:71187326-71568458	1	+	71236576	71567047	0	24	75,74,180,136,161,180,77,158,88,155,114,175,134,272,71,192,114,162,69,174,162,97,80,671,	0,49249,67893,152043,162585,169681,210250,253289,260319,263062,263861,266168,279117,285372,299621,310174,344735,346900,367813,370385,372766,376466,379677,380461,
#Partially deleted in new
chr4	71236028	71349930	chr4:71236028-71349930	0	+	71236471	71349930	789624	4	621,180,136,19,	0,19191,103341,113883,
#Partially deleted in new
chr4	71236061	71339413	chr4:71236061-71339413	0	+	71236139	71339413	789624	4	170,74,180,44,	0,514,19158,103308,
#Partially deleted in new
chr4	71255217	71473307	chr4:71255217-71473307	0	+	71255217	71255217	8553170	12	182,136,161,180,77,158,88,155,114,175,134,609,	0,84152,94694,101790,142359,185398,192428,195171,195970,198277,211226,217481,
#Deleted in new
chr4	71300257	71301235	chr4:71300257-71301235	7	-	71300257	71300257	16724991	1	978,	0,
#Partially deleted in new
chr4	71339052	71572087	chr4:71339052-71572087	1	+	71339248	71567047	0	23	453,161,180,77,158,88,155,114,175,134,272,71,192,114,162,179,73,69,174,162,97,80,4300,	0,10859,17955,58524,101563,108593,111336,112135,114442,127391,133646,147895,158448,193009,195174,207297,208595,216087,218659,221040,224740,227951,228735,
#Partially deleted in new
chr4	71339052	71473319	chr4:71339052-71473319	1	+	71339248	71473140	0	11	453,161,180,77,158,88,155,114,175,134,621,	0,10859,17955,58524,101563,108593,111336,112135,114442,127391,133646,
#Partially deleted in new
chr4	71434404	71437924	chr4:71434404-71437924	7	-	71434404	71434404	16724991	2	198,945,	0,2575,
#Partially deleted in new
chr4	71741692	71784362	chr4:71741692-71784362	3	-	71746175	71784018	789624	13	178,55,133,98,130,203,130,95,133,212,133,70,402,	0,4458,10825,12718,13285,15019,16349,21715,22111,23739,26608,27638,42268,
#Partially deleted in new
chr4	71741695	71804041	chr4:71741695-71804041	1	-	71746175	71803946	789624	14	175,55,133,98,130,203,130,95,133,212,133,70,94,116,	0,4455,10822,12715,13282,15016,16346,21712,22108,23736,26605,27635,42265,62230,
#Partially deleted in new
chr4	71741707	71754478	chr4:71741707-71754478	0	-	71741707	71741707	8553170	3	163,55,68,	0,4443,12703,
#Partially deleted in new
chr4	71741726	71784046	chr4:71741726-71784046	1	-	71741834	71784018	789624	12	144,133,98,130,203,130,95,133,212,133,70,86,	0,10791,12684,13251,14985,16315,21681,22077,23705,26574,27604,42234,
#Partially deleted in new
chr4	71741727	71784065	chr4:71741727-71784065	0	-	71754495	71784018	789624	12	143,55,133,98,203,130,95,133,212,133,70,105,	0,4423,10790,12683,14984,16314,21680,22076,23704,26573,27603,42233,
#Partially deleted in new
chr4	71741738	71769400	chr4:71741738-71769400	0	-	71741738	71741738	8553170	12	132,55,133,98,130,203,130,95,133,154,133,70,	0,4412,10779,12672,13239,14973,16303,21669,22065,23693,26562,27592,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	71759517	71759616	chr4:71759517-71759616	7	-	71759517	71759517	16724991	1	99,	0,
#Partially deleted in new
chr4	71763803	71769602	chr4:71763803-71769602	0	-	71763803	71763803	8553170	4	133,212,133,272,	0,1628,4497,5527,
#Partially deleted in new
chr4	71765469	71786010	chr4:71765469-71786010	0	-	71765469	71784018	789624	5	174,133,70,94,91,	0,2831,3861,18491,20450,
#Partially deleted in new
chr4	72031803	72148067	chr4:72031803-72148067	3	+	72031901	72147812	789624	4	397,335,100,1090,	0,96781,106236,115174,
#Partially deleted in new
chr4	72031901	72147812	chr4:72031901-72147812	1	+	72031901	72138139	789624	3	299,100,835,	0,106138,115076,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	72039177	72148061	chr4:72039177-72148061	1	+	72069021	72147812	789624	5	236,111,335,100,1084,	0,29735,89407,98862,107800,
#Partially deleted in new
chr4	72039373	72148061	chr4:72039373-72148061	1	+	72128591	72147812	789624	4	40,335,100,1084,	0,89211,98666,107604,
#Deleted in new
chr4	72146529	72148058	chr4:72146529-72148058	0	+	72146529	72146529	8553170	2	90,1081,	0,448,
#Partially deleted in new
chr4	72280968	72569386	chr4:72280968-72569386	3	-	72283135	72568762	789624	22	2736,118,208,133,166,164,81,124,134,176,146,114,133,144,106,157,84,200,157,407,28,693,	0,7782,9886,14685,17308,22948,25018,28428,30079,31322,32708,34889,37603,38363,38889,39745,42045,58525,133846,267509,286405,287725,
#Partially deleted in new
chr4	72282040	72568796	chr4:72282040-72568796	1	-	72283135	72568762	789624	23	153,1243,118,208,133,166,164,81,124,134,176,146,114,133,144,106,157,84,200,157,407,28,103,	0,421,6710,8814,13613,16236,21876,23946,27356,29007,30250,31636,33817,36531,37291,37817,38673,40973,57453,132774,266437,285333,286653,
#Partially deleted in new
chr4	72298224	72312255	chr4:72298224-72312255	0	-	72298224	72298224	8553170	6	218,164,81,124,134,144,	0,5692,7762,11172,12823,13887,
#Partially deleted in new
chr4	72323027	72330751	chr4:72323027-72330751	3	+	72323027	72323027	8553170	2	160,265,	0,7459,
#Partially deleted in new
chr4	72441675	72568045	chr4:72441675-72568045	0	-	72441675	72441675	8553170	4	541,407,28,26,	0,106802,125698,126344,
#Partially deleted in new
chr4	72807266	72808192	chr4:72807266-72808192	7	+	72807266	72807266	16724991	1	926,	0,
#Deleted in new
chr4	72965177	72965303	chr4:72965177-72965303	3	+	72965177	72965177	8553170	1	126,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	73026747	73026873	chr4:73026747-73026873	3	+	73026747	73026747	8553170	1	126,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	73052361	73069741	chr4:73052361-73069741	3	-	73058113	73069649	789624	6	5926,108,122,164,101,425,	0,9451,12416,12888,15667,16955,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	73056079	73069741	chr4:73056079-73069741	0	-	73065356	73069649	789624	5	2208,108,122,164,425,	0,5733,8698,9170,13237,
#Partially deleted in new
chr4	73058075	73069692	chr4:73058075-73069692	1	-	73058113	73069649	789624	6	212,108,125,164,101,376,	0,3737,6702,7174,9953,11241,
#Partially deleted in new
chr4	73058113	73069726	chr4:73058113-73069726	0	-	73068082	73069649	789624	6	174,108,122,164,105,410,	0,3699,6664,7136,9915,11203,
#Deleted in new
chr4	73068550	73069755	chr4:73068550-73069755	0	-	73068550	73068550	8553170	2	109,439,	0,766,
#Partially deleted in new
chr4	73073375	73258785	chr4:73073375-73258785	3	-	73076230	73258668	789624	34	2915,165,179,249,198,1634,150,156,448,172,117,96,163,176,214,143,146,112,149,753,103,144,128,88,110,192,238,95,234,148,148,157,154,510,	0,3564,3979,5266,11873,17291,20703,23741,24697,29000,40416,42445,45312,46786,47505,48241,51537,51825,61741,66155,68365,68866,69264,71369,73388,73865,75437,78054,80504,82255,82643,87816,104004,184900,
#Partially deleted in new
chr4	73075237	73258322	chr4:73075237-73258322	0	-	73076230	73258322	789624	34	1053,165,179,249,198,1634,150,156,448,172,117,96,163,176,214,143,146,112,146,753,103,144,128,88,110,192,238,95,234,148,148,157,154,47,	0,1702,2117,3404,10011,15429,18841,21879,22835,27138,38554,40583,43450,44924,45643,46379,49675,49963,59879,64293,66503,67004,67402,69507,71526,72003,73575,76192,78642,80393,80781,85954,102142,183038,
#Partially deleted in new
chr4	73075685	73258798	chr4:73075685-73258798	1	-	73076230	73258668	789624	33	605,165,179,249,198,1634,150,156,448,172,117,96,163,176,214,143,146,112,149,103,144,128,88,110,192,238,95,234,148,148,157,154,523,	0,1254,1669,2956,9563,14981,18393,21431,22387,26690,38106,40135,43002,44476,45195,45931,49227,49515,59431,66055,66556,66954,69059,71078,71555,73127,75744,78194,79945,80333,85506,101694,182590,
#Partially deleted in new
chr4	73075685	73223114	chr4:73075685-73223114	1	-	73076230	73223027	789624	34	605,165,179,249,198,1634,150,156,448,172,117,96,163,176,214,143,146,112,149,753,103,144,128,88,110,192,238,95,234,148,148,157,154,141,	0,1254,1669,2956,9563,14981,18393,21431,22387,26690,38106,40135,43002,44476,45195,45931,49227,49515,59431,63845,66055,66556,66954,69059,71078,71555,73127,75744,78194,79945,80333,85506,101694,147288,
#Partially deleted in new
chr4	73077368	73080810	chr4:73077368-73080810	0	-	73077368	73077368	8553170	3	165,249,90,	0,1273,3352,
#Partially deleted in new
chr4	73098072	73102779	chr4:73098072-73102779	0	-	73098072	73098072	8553170	2	448,404,	0,4303,
#Deleted in new
chr4	73098821	73099145	chr4:73098821-73099145	7	+	73098821	73098821	16724991	1	324,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	73100860	73104080	chr4:73100860-73104080	0	-	73100860	73100860	8553170	3	313,172,78,	0,1515,3142,
#Partially deleted in new
chr4	73102462	73258798	chr4:73102462-73258798	0	-	73102462	73258668	789624	13	85,117,96,163,176,214,143,146,112,146,753,52,514,	0,11329,13358,16225,17699,18418,19154,22450,22738,32654,37068,39278,155822,
#Partially deleted in new
chr4	73113083	73153935	chr4:73113083-73153935	0	-	73113083	73113083	8553170	19	228,117,96,163,176,214,143,146,112,149,753,103,144,128,88,110,238,95,56,	0,708,2737,5604,7078,7797,8533,11829,12117,22033,26447,28657,29158,29556,31661,33680,35729,38346,40796,
#Partially deleted in new
chr4	73125029	73258785	chr4:73125029-73258785	1	-	73125029	73258668	789624	20	29,112,149,753,103,144,81,27,14,88,110,192,238,95,234,148,148,157,154,510,	0,171,10087,14501,16711,17212,17610,17693,17725,19715,21734,22211,23783,26400,28850,30601,30989,36162,52350,133246,
#Partially deleted in new
chr4	73161191	73223039	chr4:73161191-73223039	0	-	73161191	73161191	8553170	4	157,162,154,66,	0,7737,16188,61782,
#Partially deleted in new
chr4	73259208	73317953	chr4:73259208-73317953	3	+	73259208	73259208	8553170	5	200,130,122,106,127,	0,10615,43055,47867,58618,
#Deleted in new
chr4	73263959	73264084	chr4:73263959-73264084	3	+	73263959	73263959	8553170	1	125,	0,
#Deleted in new
chr4	73337232	73337771	chr4:73337232-73337771	7	-	73337232	73337232	16724991	1	539,	0,
#Partially deleted in new
chr4	73397113	73409457	chr4:73397113-73409457	0	+	73397113	73409457	789624	6	47,38,58,133,212,103,	0,7255,8002,9515,11480,12241,
#Partially deleted in new
chr4	73404238	73421412	chr4:73404238-73421412	3	+	73404327	73420298	0	15	168,58,133,212,133,98,130,215,133,98,139,224,133,68,321,	0,877,2390,4355,5116,6073,7757,9181,10796,12017,13292,13849,15268,16015,16853,
#Partially deleted in new
chr4	73404254	73421410	chr4:73404254-73421410	1	+	73404327	73420298	789624	12	152,58,133,212,4,66,98,139,224,133,68,319,	0,861,2374,4339,4818,10847,12001,13276,13833,15252,15999,16837,
#Partially deleted in new
chr4	73404286	73421256	chr4:73404286-73421256	1	+	73404327	73420298	789624	11	120,58,130,215,133,98,139,224,133,68,165,	0,829,7709,9133,10748,11969,13244,13801,15220,15967,16805,
#Partially deleted in new
chr4	73404286	73408819	chr4:73404286-73408819	0	+	73404286	73404286	8553170	4	120,53,133,226,	0,834,2342,4307,
#Partially deleted in new
chr4	73404286	73408947	chr4:73404286-73408947	0	+	73404286	73404286	8553170	4	120,58,133,354,	0,829,2342,4307,
#Partially deleted in new
chr4	73404286	73421254	chr4:73404286-73421254	1	+	73404327	73420298	0	12	120,58,133,212,8,62,98,139,224,133,68,163,	0,829,2342,4307,5068,10819,11969,13244,13801,15220,15967,16805,
#Partially deleted in new
chr4	73404288	73409480	chr4:73404288-73409480	0	+	73404288	73404288	8553170	5	48,58,133,212,126,	0,827,2340,4305,5066,
#Partially deleted in new
chr4	73404300	73421218	chr4:73404300-73421218	0	+	73404327	73412003	789624	12	106,133,98,130,215,133,98,139,224,133,68,127,	0,5054,6011,7695,9119,10734,11955,13230,13787,15206,15953,16791,
#Partially deleted in new
chr4	73404300	73421222	chr4:73404300-73421222	1	+	73406729	73420298	789624	13	106,133,133,98,130,215,133,98,139,224,133,68,131,	0,2328,5054,6011,7695,9119,10734,11955,13230,13787,15206,15953,16791,
#Partially deleted in new
chr4	73404303	73421193	chr4:73404303-73421193	1	+	73404327	73421121	789624	14	103,58,133,212,133,98,130,215,133,98,139,224,133,102,	0,812,2325,4290,5051,6008,7692,9116,10731,11952,13227,13784,15203,16788,
#Partially deleted in new
chr4	73404307	73421222	chr4:73404307-73421222	1	+	73404327	73420298	789624	13	99,58,133,98,130,215,133,98,139,224,133,68,131,	0,808,5047,6004,7688,9112,10727,11948,13223,13780,15199,15946,16784,
#Partially deleted in new
chr4	73408637	73421200	chr4:73408637-73421200	0	+	73408637	73408637	8553170	11	168,133,98,130,215,133,98,224,133,68,109,	0,717,1674,3358,4782,6397,7618,9450,10869,11616,12454,
#Partially deleted in new
chr4	73409339	73421224	chr4:73409339-73421224	0	+	73409339	73420298	789624	11	148,98,130,215,133,98,139,224,133,68,133,	0,972,2656,4080,5695,6916,8191,8748,10167,10914,11752,
#Deleted in new
chr4	73410379	73412227	chr4:73410379-73412227	0	+	73410379	73410379	8553170	2	30,232,	0,1616,
#Partially deleted in new
chr4	73413256	73417614	chr4:73413256-73417614	0	+	73413256	73413256	8553170	4	378,133,98,84,	0,1778,2999,4274,
#Partially deleted in new
chr4	73413573	73415395	chr4:73413573-73415395	0	+	73413573	73413573	8553170	2	61,361,	0,1461,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	73418005	73419545	chr4:73418005-73419545	0	+	73418005	73418005	8553170	2	306,39,	0,1501,
#Partially deleted in new
chr4	73419280	73421217	chr4:73419280-73421217	0	+	73419280	73419280	8553170	3	175,68,126,	0,973,1811,
#Partially deleted in new
chr4	73419546	73421219	chr4:73419546-73421219	0	+	73419546	73419546	8553170	4	93,68,156,128,	0,707,1246,1545,
#Deleted in new
chr4	73431137	73437210	chr4:73431137-73437210	0	+	73431137	73431137	8553170	2	146,51,	0,6022,
#Deleted in new
chr4	73431158	73437210	chr4:73431158-73437210	0	+	73431158	73431158	8553170	3	125,141,51,	0,3311,6001,
#Partially deleted in new
chr4	73436162	73456174	chr4:73436162-73456174	3	+	73436262	73455280	0	15	185,52,133,212,133,98,130,215,133,98,139,224,133,55,544,	0,997,2011,4439,6133,7184,8830,11299,13172,13873,14452,16238,17602,19073,19468,
#Partially deleted in new
chr4	73436246	73455743	chr4:73436246-73455743	1	+	73436262	73455714	789624	14	101,52,133,212,133,98,130,215,133,98,139,224,133,113,	0,913,1927,4355,6049,7100,8746,11215,13088,13789,14368,16154,17518,19384,
#Deleted in new
chr4	73450548	73455741	chr4:73450548-73455741	0	+	73450548	73450548	8553170	5	205,224,133,55,111,	0,1852,3216,4687,5082,
#Deleted in new
chr4	73452399	73455570	chr4:73452399-73455570	0	+	73452399	73452399	8553170	3	225,133,335,	0,1365,2836,
#Deleted in new
chr4	73453489	73455777	chr4:73453489-73455777	0	+	73453489	73453489	8553170	4	141,133,55,147,	0,275,1746,2141,
#Partially deleted in new
chr4	73481682	73504001	chr4:73481682-73504001	3	+	73481775	73503070	0	15	181,49,133,212,133,98,130,215,133,98,133,224,133,61,126,	0,2258,2575,4179,5284,6041,6947,10189,13617,15969,17431,18321,20104,21367,22193,
#Deleted in new
chr4	73495114	73497749	chr4:73495114-73497749	0	+	73495114	73495114	8553170	2	318,98,	0,2537,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	73508802	73528533	chr4:73508802-73528533	3	+	73508802	73508802	789624	4	450,51,141,121,	0,872,1400,19610,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	73510198	73528722	chr4:73510198-73528722	1	+	73510198	73510198	8553170	2	145,310,	0,18214,
#Partially deleted in new
chr4	73510210	73534128	chr4:73510210-73534128	0	+	73510210	73510210	8553170	2	133,237,	0,23681,
#Deleted in new
chr4	73543821	73544013	chr4:73543821-73544013	7	+	73543821	73543821	16724991	1	192,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	73571549	73620548	chr4:73571549-73620548	3	-	73576234	73611795	789624	11	4761,98,119,52,102,185,95,143,79,99,261,	0,4860,5063,10267,10639,13630,16290,21901,27090,40181,48738,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	73573144	73620631	chr4:73573144-73620631	1	-	73576234	73620500	789624	11	3166,98,119,52,102,185,95,143,79,99,193,	0,3265,3468,8672,9044,12035,14695,20306,25495,38586,47294,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	73574570	73620412	chr4:73574570-73620412	1	-	73576234	73611795	789624	10	1740,98,119,52,185,95,143,79,99,125,	0,1839,2042,7246,10609,13269,18880,24069,37160,45717,
#Partially deleted in new
chr4	73575852	73620500	chr4:73575852-73620500	1	-	73576234	73620500	789624	10	458,98,119,52,102,185,95,143,46,62,	0,557,760,5964,6336,9327,11987,17598,40038,44586,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	73604078	73620417	chr4:73604078-73620417	0	-	73604078	73604078	8553170	3	509,99,130,	0,7652,16209,
#Partially deleted in new
chr4	73710301	73714527	chr4:73710301-73714527	3	+	73710301	73710301	8553170	3	94,119,362,	0,3035,3864,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	73740505	73743716	chr4:73740505-73743716	3	+	73740658	73742464	0	4	217,136,84,1268,	0,1036,1443,1943,
#Deleted in new
chr4	73740540	73742330	chr4:73740540-73742330	1	+	73740658	73742036	789624	3	182,136,382,	0,1001,1408,
#Deleted in new
chr4	73740568	73741986	chr4:73740568-73741986	0	+	73740568	73740568	8553170	2	154,445,	0,973,
#Deleted in new
chr4	73777635	73778060	chr4:73777635-73778060	7	-	73777635	73777635	16724991	1	425,	0,
#Deleted in new
chr4	73836496	73838760	chr4:73836496-73838760	3	+	73836750	73837641	789624	4	363,133,84,1138,	0,467,706,1126,
#Deleted in new
chr4	73836639	73837406	chr4:73836639-73837406	1	+	73836750	73837302	789624	3	220,133,204,	0,324,563,
#Partially deleted in new
chr4	73837186	73849064	chr4:73837186-73849064	0	+	73837186	73837186	8553170	3	100,112,329,	0,436,11549,
#Deleted in new
chr4	73847865	73848829	chr4:73847865-73848829	7	+	73847865	73847865	16724991	4	159,72,48,94,	0,451,710,870,
#Deleted in new
chr4	73853188	73854155	chr4:73853188-73854155	3	+	73853362	73854122	0	3	274,127,121,	0,594,846,
#Deleted in new
chr4	73869392	73870177	chr4:73869392-73870177	0	+	73869392	73869392	8553170	3	178,124,272,	0,276,513,
#Deleted in new
chr4	73869403	73871242	chr4:73869403-73871242	3	+	73869470	73870536	0	4	167,124,84,722,	0,265,502,1117,
#Partially deleted in new
chr4	73938603	73939558	chr4:73938603-73939558	7	-	73938603	73938603	16724991	1	955,	0,
#Partially deleted in new
chr4	73944010	73944324	chr4:73944010-73944324	7	-	73944010	73944010	16724991	2	126,90,	0,224,
#Deleted in new
chr4	73981076	73982124	chr4:73981076-73982124	3	-	73981203	73981953	0	3	215,127,262,	0,340,786,
#Deleted in new
chr4	73987037	73988197	chr4:73987037-73988197	3	-	73987271	73988103	0	3	337,136,242,	0,479,918,
#Deleted in new
chr4	73995641	73998779	chr4:73995641-73998779	3	-	73997636	73998581	0	4	2014,84,133,307,	0,2370,2564,2831,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	74011577	74011876	chr4:74011577-74011876	3	+	74011577	74011577	8553170	1	299,	0,
#Deleted in new
chr4	74036588	74038689	chr4:74036588-74038689	3	-	74037261	74038611	789624	4	689,84,124,178,	0,1504,1701,1923,
#Deleted in new
chr4	74037068	74038807	chr4:74037068-74038807	0	-	74037068	74037068	8553170	2	1345,296,	0,1443,
#Deleted in new
chr4	74037131	74038689	chr4:74037131-74038689	0	-	74037131	74037131	8553170	3	146,84,400,	0,961,1158,
#Deleted in new
chr4	74037655	74038650	chr4:74037655-74038650	0	-	74037655	74037655	8553170	3	521,124,139,	0,634,856,
#Deleted in new
chr4	74054037	74055399	chr4:74054037-74055399	7	-	74054037	74054037	16724991	1	1362,	0,
#Deleted in new
chr4	74054040	74054820	chr4:74054040-74054820	5	-	74054040	74054040	16724991	3	92,136,118,	0,234,662,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	74085994	74086672	chr4:74085994-74086672	7	-	74085994	74085994	16724991	1	678,	0,
#Deleted in new
chr4	74097034	74099293	chr4:74097034-74099293	3	-	74097755	74099120	0	4	737,84,124,273,	0,1566,1764,1986,
#Deleted in new
chr4	74097675	74099195	chr4:74097675-74099195	0	-	74097675	74097675	8553170	3	96,84,397,	0,925,1123,
#Deleted in new
chr4	74098530	74099196	chr4:74098530-74099196	0	-	74098530	74098530	8553170	2	392,176,	0,490,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	74114173	74242210	chr4:74114173-74242210	0	+	74174536	74241607	789624	10	210,170,78,34,185,123,153,108,93,644,	0,314,11266,45881,60332,61107,85620,87089,111128,127393,
#Partially deleted in new
chr4	74123272	74160514	chr4:74123272-74160514	0	+	74123272	74123272	8553170	3	151,78,460,	0,2167,36782,
#Partially deleted in new
chr4	74123338	74160770	chr4:74123338-74160770	0	+	74123338	74123338	8553170	4	85,78,75,716,	0,2101,20054,36716,
#Partially deleted in new
chr4	74123343	74181750	chr4:74123343-74181750	0	+	74174536	74180730	789624	7	80,78,75,185,123,180,65,	0,2096,20049,51162,51937,57343,58342,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	74125437	74242197	chr4:74125437-74242197	1	+	74175357	74241607	789624	8	80,34,185,123,153,108,93,631,	0,34617,49068,49843,74356,75825,99864,116129,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	74156510	74158373	chr4:74156510-74158373	3	-	74156510	74156510	8553170	1	1863,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	74158107	74183931	chr4:74158107-74183931	0	+	74174536	74180730	789624	7	174,34,185,123,180,106,1205,	0,1947,16398,17173,22579,23578,24619,
#Partially deleted in new
chr4	74158111	74303092	chr4:74158111-74303092	1	+	74158138	74301809	789624	8	170,185,123,153,108,93,126,1396,	0,16394,17169,41682,43151,67190,123313,143585,
#Deleted in new
chr4	74158117	74162253	chr4:74158117-74162253	0	+	74158117	74158117	8553170	2	164,2199,	0,1937,
#Partially deleted in new
chr4	74158149	74281550	chr4:74158149-74281550	0	+	74174536	74281550	789624	8	132,34,185,123,153,108,93,126,	0,1905,16356,17131,41644,43113,67152,123275,
#Partially deleted in new
chr4	74158172	74303099	chr4:74158172-74303099	3	+	74174536	74301809	789624	8	109,185,123,153,108,93,126,1403,	0,16333,17108,41621,43090,67129,123252,143524,
#Deleted in new
chr4	74158174	74162106	chr4:74158174-74162106	0	+	74158174	74158174	8553170	3	107,34,327,	0,1880,3605,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	74194039	74302598	chr4:74194039-74302598	0	+	74194039	74194039	8553170	6	1799,153,108,93,126,902,	0,5754,7223,31262,87385,107657,
#Partially deleted in new
chr4	74224067	74301990	chr4:74224067-74301990	0	+	74224067	74224067	8553170	4	80,93,126,294,	0,1234,57357,77629,
#Partially deleted in new
chr4	74280240	74302635	chr4:74280240-74302635	0	+	74280240	74280240	8553170	3	203,126,939,	0,1184,21456,
#Partially deleted in new
chr4	74281424	74293675	chr4:74281424-74293675	0	+	74281424	74281424	8553170	3	126,165,187,	0,6876,12064,
#Partially deleted in new
chr4	74308472	74315307	chr4:74308472-74315307	3	+	74308533	74314637	0	5	104,90,121,153,728,	0,620,3712,4545,6107,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	74308473	74314670	chr4:74308473-74314670	0	+	74308533	74314132	789624	6	103,90,121,27,198,91,	0,619,3711,4544,5655,6106,
#Partially deleted in new
chr4	74308486	74313590	chr4:74308486-74313590	1	+	74308533	74313192	0	4	90,63,121,573,	0,606,3698,4531,
#Partially deleted in new
chr4	74308533	74314637	chr4:74308533-74314637	1	+	74308533	74314637	0	4	43,90,121,58,	0,559,3651,6046,
#Partially deleted in new
chr4	74308533	74314637	chr4:74308533-74314637	1	+	74308533	74314637	0	5	43,90,121,27,58,	0,559,3651,4484,6046,
#Partially deleted in new
chr4	74308533	74314637	chr4:74308533-74314637	1	+	74308533	74314637	0	4	43,63,121,58,	0,559,3651,6046,
#Partially deleted in new
chr4	74308533	74314637	chr4:74308533-74314637	1	+	74308533	74314637	0	3	43,121,58,	0,3651,6046,
#Partially deleted in new
chr4	74308533	74314637	chr4:74308533-74314637	1	+	74308533	74314637	0	5	43,63,121,27,58,	0,559,3651,4484,6046,
#Partially deleted in new
chr4	74309096	74314984	chr4:74309096-74314984	0	+	74309096	74314637	789624	4	59,121,153,405,	0,3088,3921,5483,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	74365142	74388751	chr4:74365142-74388751	3	+	74365308	74384808	0	5	233,87,124,150,4025,	0,14305,15871,17502,19584,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	74365172	74382013	chr4:74365172-74382013	0	+	74365172	74365172	8553170	3	203,87,1000,	0,14275,15841,
#Deleted in new
chr4	74382422	74384952	chr4:74382422-74384952	0	+	74382422	74382422	8553170	2	372,226,	0,2304,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	74418916	74440457	chr4:74418916-74440457	3	-	74418916	74418916	8553170	2	379,179,	0,21362,
#Partially deleted in new
chr4	74445133	74455009	chr4:74445133-74455009	3	+	74445345	74452637	0	6	273,249,202,153,112,251,	0,1400,3913,5246,7410,9625,
#Partially deleted in new
chr4	74445301	74455005	chr4:74445301-74455005	1	+	74445345	74454918	789624	5	105,249,202,153,247,	0,1232,3745,5078,9457,
#Partially deleted in new
chr4	74448638	74450532	chr4:74448638-74450532	0	+	74448638	74448638	8553170	2	610,153,	0,1741,
#Partially deleted in new
chr4	74744758	74794686	chr4:74744758-74794686	3	-	74748040	74794325	0	6	1917,110,147,118,99,425,	0,3281,5814,11100,25299,49503,
#Partially deleted in new
chr4	74746378	74770156	chr4:74746378-74770156	0	-	74748040	74770156	789624	4	297,110,118,99,	0,1661,9480,23679,
#Deleted in new
chr4	74917821	74918138	chr4:74917821-74918138	7	+	74917821	74917821	16724991	2	246,40,	0,277,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	74933094	75050115	chr4:74933094-75050115	1	+	74933327	75046247	789624	3	276,79,3953,	0,100788,113068,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	74933115	75050113	chr4:74933115-75050113	3	+	74933327	75046247	789624	4	255,726,79,3951,	0,79309,100767,113047,
#Partially deleted in new
chr4	74955973	74970362	chr4:74955973-74970362	3	-	74955973	74955973	789624	4	1386,933,151,76,	0,10770,13517,14313,
#Partially deleted in new
chr4	74965170	74970124	chr4:74965170-74970124	1	-	74965170	74965170	8553170	3	260,52,634,	0,2556,4320,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	74993876	75034824	chr4:74993876-75034824	3	-	74993876	74993876	8553170	4	346,85,108,51,	0,3827,5187,40897,
#Deleted in new
chr4	75081701	75084717	chr4:75081701-75084717	3	-	75081701	75081701	8553170	2	656,129,	0,2887,
#Deleted in new
chr4	75081924	75082495	chr4:75081924-75082495	0	-	75081924	75081924	8553170	1	571,	0,
#Deleted in new
chr4	75082018	75083496	chr4:75082018-75083496	0	-	75082018	75082018	8553170	2	339,86,	0,1392,
#Deleted in new
chr4	75082036	75083668	chr4:75082036-75083668	0	-	75082036	75082036	8553170	2	321,24,	0,1608,
#Deleted in new
chr4	75101476	75101943	chr4:75101476-75101943	7	+	75101476	75101476	16724991	1	467,	0,
#Deleted in new
chr4	75101490	75101861	chr4:75101490-75101861	5	+	75101490	75101490	16724991	1	371,	0,
#Deleted in new
chr4	75194866	75195079	chr4:75194866-75195079	7	+	75194866	75194866	16724991	1	213,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	75269067	75361182	chr4:75269067-75361182	3	-	75269067	75269067	8553170	2	428,41,	0,92074,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	75341278	75359024	chr4:75341278-75359024	3	-	75341278	75341278	8553170	4	34,176,157,55,	0,183,6018,17691,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	75354075	75362566	chr4:75354075-75362566	3	+	75354075	75354075	789624	4	40,70,190,843,	0,1242,3905,7648,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	75361206	75434449	chr4:75361206-75434449	3	-	75361206	75361206	8553170	2	141,332,	0,72911,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	75401194	75423022	chr4:75401194-75423022	0	+	75401194	75401194	8553170	3	98,139,444,	0,20859,21384,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	75401217	75423023	chr4:75401217-75423023	3	+	75401217	75401217	8553170	4	75,118,139,445,	0,6677,20836,21361,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	75479036	75514685	chr4:75479036-75514685	3	-	75482537	75514286	0	9	3630,121,27,59,45,79,116,120,489,	0,11544,12574,12687,12852,15064,29783,30140,35160,
#Partially deleted in new
chr4	75481468	75514286	chr4:75481468-75514286	1	-	75482537	75514286	0	8	1198,121,27,59,45,79,116,90,	0,9112,10142,10255,10420,12632,27351,32728,
#Partially deleted in new
chr4	75482007	75514312	chr4:75482007-75514312	0	-	75490632	75514286	0	9	659,83,27,59,45,79,116,120,116,	0,8573,9603,9716,9881,12093,26812,27169,32189,
#Partially deleted in new
chr4	75482007	75514418	chr4:75482007-75514418	0	-	75482007	75482007	8553170	7	659,1202,45,79,116,120,222,	0,8573,9881,12093,26812,27169,32189,
#Partially deleted in new
chr4	75482085	75494431	chr4:75482085-75494431	0	-	75482085	75482085	8553170	6	581,121,27,59,45,331,	0,8495,9525,9638,9803,12015,
#Partially deleted in new
chr4	75482341	75514403	chr4:75482341-75514403	0	-	75494177	75514286	789624	9	325,121,55,59,45,79,112,120,207,	0,8239,9241,9382,9547,11759,26482,26835,31855,
#Partially deleted in new
chr4	75482412	75514430	chr4:75482412-75514430	1	-	75482537	75514264	0	9	254,121,27,59,45,79,116,120,190,	0,8168,9198,9311,9476,11688,26407,26764,31828,
#Partially deleted in new
chr4	75482537	75514297	chr4:75482537-75514297	1	-	75482537	75514286	0	7	129,121,59,45,79,116,101,	0,8043,9186,9351,11563,26282,31659,
#Partially deleted in new
chr4	75482537	75514286	chr4:75482537-75514286	1	-	75482537	75514286	0	8	129,121,59,45,79,116,120,90,	0,8043,9186,9351,11563,26282,26639,31659,
#Partially deleted in new
chr4	75482603	75514256	chr4:75482603-75514256	0	-	75494177	75514256	789624	9	63,121,27,59,45,79,112,120,102,	0,7977,9007,9120,9285,11497,26220,26573,31551,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	75490597	75509807	chr4:75490597-75509807	0	-	75490597	75490597	8553170	7	104,55,59,45,79,116,631,	0,985,1126,1291,3503,18222,18579,
#Partially deleted in new
chr4	75491606	75514286	chr4:75491606-75514286	0	-	75491606	75491606	8553170	7	31,59,45,79,116,120,90,	0,117,282,2494,17213,17570,22590,
#Partially deleted in new
chr4	75491910	75514764	chr4:75491910-75514764	0	-	75491910	75491910	8553170	5	23,79,112,120,102,	0,2190,16913,17266,22752,
#Deleted in new
chr4	75513945	75516931	chr4:75513945-75516931	0	+	75515452	75516931	789624	3	53,100,160,	0,1487,2826,
#Deleted in new
chr4	75514217	75516789	chr4:75514217-75516789	0	+	75515452	75516789	789624	4	303,122,100,18,	0,652,1215,2554,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	75514437	75517720	chr4:75514437-75517720	0	+	75514437	75514437	8553170	3	83,100,949,	0,995,2334,
#Duplicated in new
chr4	75514443	75544440	chr4:75514443-75544440	1	+	75516814	75542513	789624	4	77,208,144,113,	0,2328,27965,29884,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	75514472	75530026	chr4:75514472-75530026	3	+	75515452	75527214	789624	5	48,100,208,126,3067,	0,960,2299,7263,12487,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	75514472	75530026	chr4:75514472-75530026	1	+	75515452	75527214	789624	4	48,100,208,3067,	0,960,2299,12487,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	75514472	75543055	chr4:75514472-75543055	1	+	75516814	75539927	789624	4	48,208,101,647,	0,2299,25386,27936,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	75514472	75542959	chr4:75514472-75542959	1	+	75515452	75539927	789624	6	48,100,208,126,101,551,	0,960,2299,7263,25386,27936,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	75514472	75544662	chr4:75514472-75544662	1	+	75516814	75539927	789624	6	48,208,126,101,78,335,	0,2299,7263,25386,27936,29855,
#Partially deleted in new
chr4	75514472	75522582	chr4:75514472-75522582	1	+	75516814	75521906	789624	3	48,208,847,	0,2299,7263,
#Partially deleted in new
chr4	75514488	75522050	chr4:75514488-75522050	0	+	75514488	75514488	8553170	4	32,100,208,315,	0,944,2283,7247,
#Partially deleted in new
chr4	75514519	75527214	chr4:75514519-75527214	1	+	75515452	75527214	789624	5	472,100,208,126,255,	0,913,2252,7216,12440,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	75556047	75565885	chr4:75556047-75565885	3	+	75556082	75564439	789624	2	102,1772,	0,8066,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	75556047	75564645	chr4:75556047-75564645	0	+	75556082	75563265	789624	4	102,136,139,258,	0,7162,8066,8340,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	75556047	75565871	chr4:75556047-75565871	1	+	75556082	75564439	789624	3	102,139,1484,	0,8066,8340,
#Partially deleted in new
chr4	75556064	75564544	chr4:75556064-75564544	1	+	75556082	75564533	789624	3	85,44,431,	0,476,8049,
#Partially deleted in new
chr4	75578004	75630716	chr4:75578004-75630716	3	-	75581832	75625988	0	12	1174,89,94,302,136,89,140,113,179,195,197,675,	0,3805,18242,18930,20072,22276,25812,27517,29178,36250,47816,52037,
#Partially deleted in new
chr4	75578863	75630526	chr4:75578863-75630526	1	-	75581832	75625988	789624	14	315,89,107,124,94,302,136,89,140,113,179,195,197,485,	0,2946,12955,13282,17383,18071,19213,21417,24953,26658,28319,35391,46957,51178,
#Deleted in new
chr4	75596079	75597140	chr4:75596079-75597140	0	-	75596079	75596079	8553170	2	261,206,	0,855,
#Partially deleted in new
chr4	75598118	75630486	chr4:75598118-75630486	0	-	75603947	75625988	789624	5	94,89,140,197,445,	0,2162,5698,27702,31923,
#Partially deleted in new
chr4	75642781	75673969	chr4:75642781-75673969	3	-	75645429	75662025	0	12	2921,119,129,103,99,181,103,91,174,82,119,762,	0,3556,4247,5857,11201,12284,12986,14142,14775,16061,19149,30426,
#Partially deleted in new
chr4	75642781	75673114	chr4:75642781-75673114	1	-	75645429	75662025	0	12	2921,119,129,103,99,181,103,91,174,82,119,96,	0,3556,4247,5857,11201,12284,12986,14142,14775,16061,19149,30237,
#Partially deleted in new
chr4	75644388	75673401	chr4:75644388-75673401	1	-	75645429	75662025	0	11	1314,119,129,103,181,103,91,174,82,119,194,	0,1949,2640,4250,10677,11379,12535,13168,14454,17542,28819,
#Partially deleted in new
chr4	75647023	75649102	chr4:75647023-75649102	0	-	75647023	75647023	8553170	2	134,464,	0,1615,
#Partially deleted in new
chr4	75654913	75657694	chr4:75654913-75657694	0	-	75654913	75654913	8553170	4	333,103,91,138,	0,854,2010,2643,
#Partially deleted in new
chr4	75655065	75658896	chr4:75655065-75658896	0	-	75655852	75658896	789624	3	181,103,54,	0,702,3777,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	75655196	75673157	chr4:75655196-75673157	0	-	75655196	75662025	789624	8	50,103,91,174,82,119,313,139,	0,571,1727,2360,3646,6734,7016,17822,
#Partially deleted in new
chr4	75655842	75673378	chr4:75655842-75673378	0	-	75655842	75655842	8553170	5	28,91,174,82,171,	0,1081,1714,3000,17365,
#Partially deleted in new
chr4	75656940	75672681	chr4:75656940-75672681	0	-	75656940	75662025	789624	6	74,174,82,119,66,69,	0,616,1902,4990,13421,15672,
#Partially deleted in new
chr4	75656972	75673146	chr4:75656972-75673146	0	-	75656972	75656972	8553170	4	42,174,82,128,	0,584,1870,16046,
#Partially deleted in new
chr4	75656990	75672927	chr4:75656990-75672927	0	-	75656990	75662025	789624	5	24,174,82,119,115,	0,566,1852,4940,15822,
#Partially deleted in new
chr4	75657560	75672711	chr4:75657560-75672711	0	-	75657560	75662025	789624	4	170,82,119,206,	0,1282,4370,14945,
#Partially deleted in new
chr4	75657575	75673387	chr4:75657575-75673387	0	-	75657575	75662025	789624	4	155,82,143,180,	0,1267,4355,15632,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	75657600	75672681	chr4:75657600-75672681	0	-	75657600	75662025	789624	5	130,82,119,144,92,	0,1242,4330,4781,14989,
#Partially deleted in new
chr4	75657608	75724525	chr4:75657608-75724525	0	-	75657608	75662025	789624	4	122,82,119,250,	0,1234,4322,66667,
#Partially deleted in new
chr4	75657674	75724445	chr4:75657674-75724445	0	-	75657674	75662025	789624	5	56,82,119,132,170,	0,1168,4256,37123,66601,
#Partially deleted in new
chr4	75658842	75724375	chr4:75658842-75724375	0	-	75658842	75662025	789624	5	82,119,132,121,100,	0,3088,35955,65213,65433,
#Partially deleted in new
chr4	75658851	75724470	chr4:75658851-75724470	0	-	75658851	75662025	789624	4	73,119,121,195,	0,3079,65204,65424,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	75661514	75673350	chr4:75661514-75673350	0	-	75661514	75661514	8553170	2	535,143,	0,11693,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	75662119	75662213	chr4:75662119-75662213	3	-	75662119	75662119	8553170	1	94,	0,
#Partially deleted in new
chr4	75724592	75814213	chr4:75724592-75814213	3	+	75724819	75813295	0	24	293,87,65,77,101,103,56,121,179,141,89,155,212,111,119,182,122,139,164,87,99,108,216,1008,	0,27780,27947,32904,45846,46229,46489,50083,58087,62469,65557,66050,69097,75029,75758,76025,76486,79541,80547,81893,84360,85839,87567,88613,
#Partially deleted in new
chr4	75724597	75814286	chr4:75724597-75814286	1	+	75724819	75813295	0	26	288,87,65,77,12,101,103,56,121,179,141,89,155,212,21,111,119,182,122,139,164,87,99,108,216,1081,	0,27775,27942,32899,35996,45841,46224,46484,50078,58082,62464,65552,66045,69092,70738,75024,75753,76020,76481,79536,80542,81888,84355,85834,87562,88608,
#Deleted in new
chr4	75770122	75771138	chr4:75770122-75771138	0	+	75770122	75770122	8553170	3	417,103,57,	0,699,959,
#Partially deleted in new
chr4	75805008	75806555	chr4:75805008-75806555	0	+	75805008	75805008	8553170	2	295,70,	0,1477,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	75829453	75829589	chr4:75829453-75829589	3	-	75829453	75829453	8553170	1	136,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	75830750	75832705	chr4:75830750-75832705	3	+	75830750	75830750	8553170	1	1955,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr4	75859863	75902423	chr4:75859863-75902423	0	-	75888328	75896325	789624	18	1057,88,331,107,143,186,387,655,150,37,167,47,118,176,58,128,134,194,	0,4576,6325,7449,12161,13263,16423,21467,23062,23302,24730,26988,28350,30093,31784,31987,36407,42366,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr4	75859871	75902528	chr4:75859871-75902528	3	-	75860666	75896325	789624	17	1049,88,164,107,143,186,387,150,37,167,47,115,176,58,128,113,299,	0,4568,6317,7441,12153,13255,16415,23054,23294,24722,26980,28342,30085,31776,31979,36399,42358,
#Partially deleted in new
chr4	75866478	75896325	chr4:75866478-75896325	1	-	75866478	75896325	789624	14	41,107,143,186,387,150,37,167,47,115,176,58,128,55,	0,834,5546,6648,9808,16447,16687,18115,20373,21735,23478,25169,25372,29792,
#Partially deleted in new
chr4	75882752	75884823	chr4:75882752-75884823	0	-	75882752	75882752	8553170	3	323,37,230,	0,413,1841,
#Deleted in new
chr4	75882948	75883532	chr4:75882948-75883532	0	-	75882948	75882948	8553170	2	127,367,	0,217,
#Partially deleted in new
chr4	75891933	75902571	chr4:75891933-75902571	0	-	75891933	75891933	8553170	3	45,134,342,	0,4337,10296,
#Partially deleted in new
chr4	75913656	75941051	chr4:75913656-75941051	3	-	75914903	75940949	789624	11	682,118,29,67,63,173,77,91,127,165,308,	0,1211,5104,6252,7081,7294,12078,17557,22452,26344,27087,
#Partially deleted in new
chr4	75913968	75921027	chr4:75913968-75921027	0	-	75913968	75913968	8553170	4	370,67,63,77,	0,5940,6769,6982,
#Partially deleted in new
chr4	75914304	75925813	chr4:75914304-75925813	0	-	75914949	75925813	789624	6	34,118,67,63,173,79,	0,563,5604,6433,6646,11430,
#Partially deleted in new
chr4	75916437	75936230	chr4:75916437-75936230	0	-	75916503	75936230	789624	8	112,29,67,63,173,77,91,122,	0,2323,3471,4300,4513,9297,14776,19671,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	75917466	75940973	chr4:75917466-75940973	1	-	75917770	75940949	789624	9	307,67,63,173,77,91,127,165,230,	0,2442,3271,3484,8268,13747,18642,22534,23277,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	75919341	75940260	chr4:75919341-75940260	1	-	75919815	75940068	789624	7	634,63,173,77,91,127,260,	0,1396,1609,6393,11872,16767,20659,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	75934890	75940983	chr4:75934890-75940983	1	-	75936102	75940949	789624	3	1345,165,240,	0,5110,5853,
#Partially deleted in new
chr4	75936163	75940224	chr4:75936163-75940224	0	-	75936163	75936163	8553170	2	72,482,	0,3579,
#Deleted in new
chr4	75939969	75941011	chr4:75939969-75941011	0	-	75939969	75939969	8553170	2	196,268,	0,774,
#Partially deleted in new
chr4	75940949	75957371	chr4:75940949-75957371	0	-	75940949	75940949	8553170	4	331,110,162,47,	0,9738,15025,16375,
#Partially deleted in new
chr4	75949905	75990938	chr4:75949905-75990938	0	-	75981521	75990841	789624	22	892,162,85,191,95,127,77,98,77,59,58,104,70,102,75,58,101,72,111,174,105,187,	0,6069,7419,7612,7941,10160,11122,11305,14229,15858,17371,19390,20403,21451,23411,24170,25838,26018,27740,31466,32027,40846,
#Partially deleted in new
chr4	75949915	75990960	chr4:75949915-75990960	3	-	75950749	75990841	789624	22	882,162,85,191,95,127,77,98,77,59,58,104,70,102,75,58,101,72,111,99,105,209,	0,6059,7409,7602,7931,10150,11112,11295,14219,15848,17361,19380,20393,21441,23401,24160,25828,26008,27730,31456,32017,40836,
#Partially deleted in new
chr4	75950285	75990937	chr4:75950285-75990937	1	-	75950749	75990841	789624	21	512,162,85,191,95,127,77,98,77,59,58,104,70,102,75,58,101,72,99,105,186,	0,5689,7039,7232,7561,9780,10742,10925,13849,15478,16991,19010,20023,21071,23031,23790,25458,25638,31086,31647,40466,
#Partially deleted in new
chr4	75960121	75973391	chr4:75960121-75973391	0	-	75960121	75960121	8553170	9	71,77,98,77,59,104,70,102,75,	0,906,1089,4013,5642,9174,10187,11235,13195,
#Partially deleted in new
chr4	75965783	75975844	chr4:75965783-75975844	0	-	75965783	75965783	8553170	7	39,58,104,70,102,75,101,	0,1493,3512,4525,5573,7533,9960,
#Partially deleted in new
chr4	75971384	75977685	chr4:75971384-75977685	0	-	75971384	75971384	8553170	5	74,75,101,72,40,	0,1932,4359,4539,6261,
#Partially deleted in new
chr4	75973359	75990931	chr4:75973359-75990931	0	-	75981442	75990841	789624	8	32,58,101,72,111,143,105,180,	0,716,2384,2564,4286,8012,8573,17392,
#Partially deleted in new
chr4	75977668	75990962	chr4:75977668-75990962	0	-	75977668	75977668	8553170	4	88,99,105,267,	0,3703,4264,13027,
#Partially deleted in new
chr4	75977722	75990945	chr4:75977722-75990945	0	-	75981521	75990710	789624	4	34,174,105,250,	0,3649,4210,12973,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	75980789	76005942	chr4:75980789-76005942	3	+	75980789	75980789	789624	3	176,639,870,	0,15316,24283,
#Partially deleted in new
chr4	76001274	76007488	chr4:76001274-76007488	3	-	76003597	76007449	789624	4	2425,85,127,103,	0,3534,4873,6111,
#Partially deleted in new
chr4	76011183	76082076	chr4:76011183-76082076	0	+	76075889	76082076	789624	4	137,34,78,253,	0,47408,64697,70640,
#Partially deleted in new
chr4	76011199	76112802	chr4:76011199-76112802	1	+	76075889	76112519	789624	10	121,78,712,33,33,30,30,30,33,417,	0,64681,70624,86444,87755,89091,89595,89790,92737,101186,
#Partially deleted in new
chr4	76011248	76082359	chr4:76011248-76082359	0	+	76075889	76082359	789624	5	72,81,34,78,536,	0,46741,47343,64632,70575,
#Partially deleted in new
chr4	76012096	76082143	chr4:76012096-76082143	0	+	76075889	76082143	789624	3	147,78,320,	0,63784,69727,
#Deleted in new
chr4	76021116	76023497	chr4:76021116-76023497	3	-	76021929	76023431	0	4	832,90,127,127,	0,1249,1574,2254,
#Deleted in new
chr4	76033681	76036197	chr4:76033681-76036197	1	-	76034792	76035987	0	4	1135,73,127,271,	0,1365,1534,2245,
#Partially deleted in new
chr4	76034689	76041415	chr4:76034689-76041415	3	-	76034792	76035987	0	5	127,73,127,138,302,	0,357,526,1237,6424,
#Deleted in new
chr4	76036749	76037064	chr4:76036749-76037064	7	-	76036749	76036749	16724991	1	315,	0,
#Partially deleted in new
chr4	76074709	76112791	chr4:76074709-76112791	3	+	76075889	76112519	789624	11	110,78,712,33,33,30,30,30,33,33,406,	0,1171,7114,22934,24245,25581,26085,26280,29227,33051,37676,
#Partially deleted in new
chr4	76074709	76112791	chr4:76074709-76112791	1	+	76075889	76112519	789624	12	110,78,712,33,33,30,30,30,33,33,33,406,	0,1171,7114,22934,24245,25581,26085,26280,29227,29887,33051,37676,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	76074712	76099601	chr4:76074712-76099601	0	+	76074712	76074712	8553170	5	107,78,712,33,647,	0,1168,7111,22931,24242,
#Partially deleted in new
chr4	76075250	76082278	chr4:76075250-76082278	0	+	76075889	76082278	789624	3	27,78,455,	0,630,6573,
#Partially deleted in new
chr4	76075880	76112537	chr4:76075880-76112537	0	+	76075880	76075880	8553170	5	78,30,30,33,152,	0,24914,25109,28056,36505,
#Partially deleted in new
chr4	76075880	76112537	chr4:76075880-76112537	0	+	76075880	76075880	8553170	8	78,33,33,30,30,30,33,152,	0,21763,23074,24410,24914,25109,28056,36505,
#Partially deleted in new
chr4	76075880	76112537	chr4:76075880-76112537	0	+	76075880	76075880	8553170	7	78,33,30,30,30,33,152,	0,23074,24410,24914,25109,28056,36505,
#Partially deleted in new
chr4	76082498	76112412	chr4:76082498-76112412	0	+	76082498	76082498	8553170	9	37,33,30,30,30,33,33,33,27,	0,16456,17792,18296,18491,21438,22098,25262,29887,
#Partially deleted in new
chr4	76082498	76112412	chr4:76082498-76112412	0	+	76082498	76112412	789624	11	37,33,33,30,30,30,33,33,33,33,27,	0,15145,16456,17792,18296,18491,21438,22098,23023,25262,29887,
#Partially deleted in new
chr4	76107215	76112580	chr4:76107215-76112580	0	+	76107215	76107215	8553170	2	578,195,	0,5170,
#Partially deleted in new
chr4	76114658	76148416	chr4:76114658-76148416	0	-	76134348	76148374	789624	10	836,111,120,94,55,197,188,144,84,109,	0,3005,3416,15997,16571,17864,19516,29490,29731,33649,
#Partially deleted in new
chr4	76114658	76130851	chr4:76114658-76130851	0	-	76114658	76114658	8553170	4	836,531,108,196,	0,3005,9990,15997,
#Partially deleted in new
chr4	76114663	76148515	chr4:76114663-76148515	3	-	76115365	76148374	0	12	831,111,120,108,94,55,197,188,227,144,84,208,	0,3000,3411,9985,15992,16566,17859,19511,21522,29485,29726,33644,
#Partially deleted in new
chr4	76115086	76148405	chr4:76115086-76148405	0	-	76144211	76148374	789624	12	408,111,120,108,94,55,197,144,84,23,162,98,	0,2577,2988,9562,15569,16143,17436,29062,29303,30468,32392,33221,
#Partially deleted in new
chr4	76115103	76130701	chr4:76115103-76130701	0	-	76115103	76115103	8553170	5	391,79,120,108,46,	0,2560,2971,9545,15552,
#Partially deleted in new
chr4	76115205	76148397	chr4:76115205-76148397	1	-	76115365	76148374	0	11	289,111,120,108,94,55,197,188,227,84,90,	0,2458,2869,9443,15450,16024,17317,18969,20980,29184,33102,
#Partially deleted in new
chr4	76115300	76148397	chr4:76115300-76148397	0	-	76134348	76148374	789624	11	194,111,120,108,94,55,197,188,144,84,90,	0,2363,2774,9348,15355,15929,17222,18874,28848,29089,33007,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	76115437	76118437	chr4:76115437-76118437	0	-	76115437	76115437	8553170	3	57,111,363,	0,2226,2637,
#Partially deleted in new
chr4	76124579	76148444	chr4:76124579-76148444	0	-	76124579	76124579	8553170	2	177,137,	0,23728,
#Partially deleted in new
chr4	76132319	76134311	chr4:76132319-76134311	0	-	76132319	76132319	8553170	2	400,137,	0,1855,
#Partially deleted in new
chr4	76134175	76148377	chr4:76134175-76148377	0	-	76134175	76134175	8553170	6	187,227,144,84,137,70,	0,2010,9973,10214,11379,14132,
#Partially deleted in new
chr4	76136187	76148202	chr4:76136187-76148202	0	-	76136187	76136187	8553170	4	225,144,84,113,	0,7961,8202,11902,
#Partially deleted in new
chr4	76136320	76147821	chr4:76136320-76147821	0	-	76136320	76136320	8553170	5	92,144,84,162,66,	0,7828,8069,11158,11435,
#Partially deleted in new
chr4	76144129	76148434	chr4:76144129-76148434	0	-	76144129	76144129	8553170	4	163,84,147,127,	0,260,1853,4178,
#Partially deleted in new
chr4	76144129	76148398	chr4:76144129-76148398	0	-	76144129	76148374	789624	4	163,84,162,91,	0,260,3349,4178,
#Partially deleted in new
chr4	76144148	76145820	chr4:76144148-76145820	0	-	76144148	76144148	8553170	3	144,84,266,	0,241,1406,
#Partially deleted in new
chr4	76144183	76148200	chr4:76144183-76148200	0	-	76144183	76144183	8553170	4	109,84,137,111,	0,206,1371,3906,
#Partially deleted in new
chr4	76144196	76148397	chr4:76144196-76148397	0	-	76146103	76148374	789624	5	96,84,147,162,90,	0,193,1786,3282,4111,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	76158732	76213918	chr4:76158732-76213918	3	-	76161712	76213543	0	12	3019,159,52,74,119,170,120,92,189,148,158,492,	0,4492,7517,9670,11134,15411,17058,17704,20784,22221,36974,54694,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	76158749	76213508	chr4:76158749-76213508	0	-	76179647	76213508	789624	12	3002,159,52,74,119,170,120,92,179,148,158,82,	0,4475,7500,9653,11117,15394,17041,17687,20767,22204,36957,54677,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	76158759	76234536	chr4:76158759-76234536	1	-	76161712	76179654	789624	12	2992,159,52,74,119,170,120,92,189,148,158,234,	0,4465,7490,9643,11107,15384,17031,17677,20757,22194,36947,75543,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	76158759	76213799	chr4:76158759-76213799	0	-	76175901	76213543	789624	11	2992,159,52,74,119,170,120,189,148,158,373,	0,4465,7490,9643,11107,15384,17031,20757,22194,36947,54667,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	76158760	76213824	chr4:76158760-76213824	1	-	76161737	76213543	789624	12	2991,97,52,74,119,170,120,92,189,148,158,398,	0,4526,7489,9642,11106,15383,17030,17676,20756,22193,36946,54666,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	76158793	76213591	chr4:76158793-76213591	1	-	76161712	76213543	789624	11	2958,159,52,74,119,170,92,189,148,158,165,	0,4431,7456,9609,11073,15350,17643,20723,22160,36913,54633,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	76158913	76213876	chr4:76158913-76213876	0	-	76158913	76158913	8553170	11	2838,159,52,74,119,170,120,92,1585,158,450,	0,4311,7336,9489,10953,15230,16877,17523,20603,36793,54513,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	76159002	76213876	chr4:76159002-76213876	1	-	76161712	76213543	789624	12	2749,159,52,74,119,170,120,92,189,139,158,450,	0,4222,7247,9400,10864,15141,16788,17434,20514,21951,36704,54424,
#Partially deleted in new
chr4	76160058	76213789	chr4:76160058-76213789	0	-	76179768	76213543	789624	12	1693,159,52,74,119,170,120,92,255,148,158,363,	0,3166,6191,8344,9808,14085,15732,16378,19458,20895,35648,53368,
#Partially deleted in new
chr4	76160949	76213772	chr4:76160949-76213772	1	-	76161712	76213543	789624	5	802,159,52,158,346,	0,2275,5300,34757,52477,
#Partially deleted in new
chr4	76161285	76213603	chr4:76161285-76213603	1	-	76161712	76213543	0	9	466,159,52,74,119,170,120,158,177,	0,1939,4964,7117,8581,12858,14505,34421,52141,
#Partially deleted in new
chr4	76161401	76166301	chr4:76161401-76166301	0	-	76161669	76166301	789624	3	343,159,52,	0,1823,4848,
#Partially deleted in new
chr4	76161451	76213686	chr4:76161451-76213686	0	-	76166189	76213543	789624	12	300,159,133,74,119,170,120,92,189,148,158,260,	0,1773,4717,6951,8415,12692,14339,14985,18065,19502,34255,51975,
#Deleted in new
chr4	76161453	76163457	chr4:76161453-76163457	0	-	76161453	76161453	8553170	2	298,233,	0,1771,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	76161456	76213795	chr4:76161456-76213795	0	-	76161456	76161456	8553170	11	295,3077,74,119,170,120,92,189,148,158,369,	0,1768,6946,8410,12687,14334,14980,18060,19497,34250,51970,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	76161536	76213520	chr4:76161536-76213520	0	-	76161712	76213520	789624	13	215,159,52,74,119,170,120,92,189,144,148,158,94,	0,1688,4713,6866,8330,12607,14254,14900,17980,18674,19417,34170,51890,
#Partially deleted in new
chr4	76161648	76213824	chr4:76161648-76213824	1	-	76163209	76213543	789624	11	1735,52,74,119,170,120,92,189,148,158,398,	0,4601,6754,8218,12495,14142,14788,17868,19305,34058,51778,
#Partially deleted in new
chr4	76161665	76166864	chr4:76161665-76166864	0	-	76161665	76161665	8553170	3	86,159,615,	0,1559,4584,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	76172699	76175452	chr4:76172699-76175452	0	-	76172699	76172699	8553170	1	2753,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	76172727	76179709	chr4:76172727-76179709	0	-	76172727	76172727	8553170	4	1586,120,92,193,	0,3063,3709,6789,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	76173551	76177133	chr4:76173551-76177133	0	-	76173551	76173551	8553170	3	762,120,697,	0,2239,2885,
#Partially deleted in new
chr4	76174220	76176251	chr4:76174220-76176251	0	-	76174220	76174220	8553170	2	93,461,	0,1570,
#Partially deleted in new
chr4	76175871	76213338	chr4:76175871-76213338	0	-	76175871	76175871	8553170	6	39,92,189,148,158,216,	0,565,3645,5082,19835,37251,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	76179077	76213796	chr4:76179077-76213796	0	-	76179077	76179077	8553170	3	2024,158,370,	0,16629,34349,
#Partially deleted in new
chr4	76179367	76213471	chr4:76179367-76213471	0	-	76179367	76179367	8553170	4	338,148,158,45,	0,1586,16339,34059,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	76191849	76213826	chr4:76191849-76213826	0	-	76191849	76191849	8553170	2	4015,400,	0,21577,
#Partially deleted in new
chr4	76214103	76268769	chr4:76214103-76268769	0	+	76214274	76268769	789624	3	321,140,110,	0,49600,54556,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	76236268	76256460	chr4:76236268-76256460	0	+	76236268	76236268	8553170	2	384,283,	0,19909,
#Partially deleted in new
chr4	76251699	76278655	chr4:76251699-76278655	1	+	76263787	76278248	789624	4	121,140,154,587,	0,12004,16960,26369,
#Partially deleted in new
chr4	76251720	76311120	chr4:76251720-76311120	3	+	76251746	76309173	789624	7	100,346,140,109,201,156,1977,	0,4457,11983,16939,19847,26348,57423,
#Partially deleted in new
chr4	76251731	76310379	chr4:76251731-76310379	0	+	76251746	76263791	789624	3	89,140,1236,	0,11972,57412,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	76251732	76283779	chr4:76251732-76283779	1	+	76263787	76278248	789624	5	88,140,109,201,5711,	0,11971,16927,19835,26336,
#Partially deleted in new
chr4	76251732	76310044	chr4:76251732-76310044	0	+	76251746	76263791	789624	5	88,140,154,201,901,	0,11971,16927,19835,57411,
#Partially deleted in new
chr4	76251740	76283754	chr4:76251740-76283754	3	+	76251746	76283458	789624	8	80,346,140,109,201,156,78,374,	0,4437,11963,16919,19827,26328,28523,31640,
#Partially deleted in new
chr4	76256452	76268911	chr4:76256452-76268911	0	+	76256452	76268822	789624	3	71,140,252,	0,7251,12207,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	76267505	76269614	chr4:76267505-76269614	0	+	76267505	76267505	8553170	1	2109,	0,
#Partially deleted in new
chr4	76278118	76283774	chr4:76278118-76283774	0	+	76278118	76278118	8553170	2	106,394,	0,5262,
#Partially deleted in new
chr4	76306025	76311599	chr4:76306025-76311599	3	+	76306769	76310000	789624	2	964,2456,	0,3118,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	76312996	76367634	chr4:76312996-76367634	0	-	76312996	76312996	8553170	13	250,108,159,68,60,60,203,126,1562,113,153,190,341,	0,10305,12860,15903,18347,19435,20968,37999,38723,42327,44377,49129,54297,
#Partially deleted in new
chr4	76313001	76407305	chr4:76313001-76407305	3	-	76313169	76403207	789624	24	245,108,159,68,60,60,146,126,93,159,113,153,190,483,198,120,115,111,77,328,110,218,139,84,	0,10300,12855,15898,18342,19430,21020,37994,38718,40121,42322,44372,49124,54292,56424,58415,66288,69608,70660,71086,71554,83267,90136,94220,
#Deleted in new
chr4	76344549	76345590	chr4:76344549-76345590	7	+	76344549	76344549	16724991	1	1041,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	76356609	76356715	chr4:76356609-76356715	3	-	76356609	76356609	8553170	1	106,	0,
#Partially deleted in new
chr4	76375176	76407323	chr4:76375176-76407323	1	-	76375512	76403207	789624	9	528,115,111,77,328,110,218,139,102,	0,4113,7433,8485,8911,9379,21092,27961,32045,
#Partially deleted in new
chr4	76384378	76421843	chr4:76384378-76421843	0	-	76384378	76384378	8553170	6	37,110,143,43,104,103,	0,177,18759,27711,29882,37362,
#Partially deleted in new
chr4	76396268	76421868	chr4:76396268-76421868	0	-	76396268	76396268	8553170	4	218,143,43,128,	0,6869,15821,25472,
#Deleted in new
chr4	76401250	76401569	chr4:76401250-76401569	7	+	76401250	76401250	16724991	1	319,	0,
#Deleted in new
chr4	76402075	76402146	chr4:76402075-76402146	3	+	76402075	76402075	8553170	1	71,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	76435099	76783253	chr4:76435099-76783253	3	+	76436052	76779177	0	11	1121,155,132,132,3166,74,882,489,151,273,4445,	0,120509,275056,295704,303661,313917,319211,321349,324445,335526,343709,
#Partially deleted in new
chr4	76436111	76645645	chr4:76436111-76645645	0	+	76436111	76436111	8553170	3	109,155,347,	0,119497,209187,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	76436145	76559576	chr4:76436145-76559576	0	+	76436145	76436145	8553170	3	75,155,398,	0,119463,123033,
#Deleted in new
chr4	76509283	76509719	chr4:76509283-76509719	7	-	76509283	76509283	16724991	1	436,	0,
#Partially deleted in new
chr4	76555613	76754586	chr4:76555613-76754586	0	+	76555613	76555613	8553170	5	150,132,132,74,276,	0,154542,175190,193403,198697,
#Deleted in new
chr4	76573567	76573632	chr4:76573567-76573632	3	+	76573567	76573567	5263520	1	65,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	76575550	76575626	chr4:76575550-76575626	3	+	76575550	76575550	5263520	1	76,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	76586139	76645354	chr4:76586139-76645354	0	+	76586139	76586139	8553170	3	330,118,56,	0,42726,59159,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	76586193	76644368	chr4:76586193-76644368	0	+	76586193	76586193	8553170	5	276,125,44,65,94,	0,51340,52644,53384,58081,
#Partially deleted in new
chr4	76586254	76738835	chr4:76586254-76738835	0	+	76586254	76586254	8553170	4	215,132,132,75,	0,123901,144549,152506,
#Partially deleted in new
chr4	76586285	76645645	chr4:76586285-76645645	0	+	76586285	76586285	8553170	2	184,347,	0,59013,
#Deleted in new
chr4	76586312	76587265	chr4:76586312-76587265	0	+	76586312	76586312	8553170	2	157,318,	0,635,
#Partially deleted in new
chr4	76639516	76779177	chr4:76639516-76779177	1	+	76639562	76779177	789624	10	126,132,132,3166,74,882,489,151,273,369,	0,70639,91287,99244,109500,114794,116932,120028,131109,139292,
#Partially deleted in new
chr4	76689570	76742130	chr4:76689570-76742130	0	+	76689570	76689570	8553170	4	132,132,132,3370,	0,20585,41233,49190,
#Partially deleted in new
chr4	76709766	76738993	chr4:76709766-76738993	0	+	76709766	76709766	8553170	4	292,132,132,233,	0,389,21037,28994,
#Partially deleted in new
chr4	76716000	76730935	chr4:76716000-76730935	0	+	76716390	76730935	789624	2	410,132,	0,14803,
#Partially deleted in new
chr4	76756959	76758474	chr4:76756959-76758474	3	-	76756959	76756959	8553170	2	129,426,	0,1089,
#Partially deleted in new
chr4	76758553	76801964	chr4:76758553-76801964	3	-	76758553	76758553	8553170	2	39,71,	0,43340,
#Deleted in new
chr4	76886028	76886370	chr4:76886028-76886370	7	-	76886028	76886028	16724991	1	342,	0,
#Deleted in new
chr4	76891033	76891445	chr4:76891033-76891445	7	+	76891033	76891033	16724991	1	412,	0,
#Deleted in new
chr4	76894927	76898147	chr4:76894927-76898147	3	-	76895467	76897849	789624	1	3220,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	76949702	77038614	chr4:76949702-77038614	3	+	76949903	77034512	789624	10	228,115,196,187,162,97,169,133,188,4118,	0,46722,55898,62032,65153,69462,70799,78926,81080,84794,
#Partially deleted in new
chr4	76949750	77032158	chr4:76949750-77032158	1	+	76949903	77030974	789624	9	180,115,196,187,162,97,169,133,1376,	0,46674,55850,61984,65105,69414,70751,78878,81032,
#Partially deleted in new
chr4	76949765	77030836	chr4:76949765-77030836	0	+	76974804	77030836	789624	12	165,201,61,330,115,196,187,162,97,169,133,54,	0,22624,23244,24712,46659,55835,61969,65090,69399,70736,78863,81017,
#Partially deleted in new
chr4	76949808	77040384	chr4:76949808-77040384	1	+	76949903	77036794	789624	11	122,115,196,187,162,97,169,133,188,68,642,	0,46616,55792,61926,65047,69356,70693,78820,80974,86961,89934,
#Partially deleted in new
chr4	76949835	77034667	chr4:76949835-77034667	0	+	76949835	76949835	8553170	4	95,133,188,171,	0,78793,80947,84661,
#Partially deleted in new
chr4	76949836	77034821	chr4:76949836-77034821	1	+	76995881	77034512	789624	12	94,62,158,115,196,187,162,97,169,133,188,325,	0,37972,45944,46588,55764,61898,65019,69328,70665,78792,80946,84660,
#Partially deleted in new
chr4	76949861	77011744	chr4:76949861-77011744	0	+	76995881	77011744	789624	5	69,158,115,196,10,	0,45919,46563,55739,61873,
#Deleted in new
chr4	76958859	76959169	chr4:76958859-76959169	7	-	76958859	76958859	16724991	1	310,	0,
#Partially deleted in new
chr4	76985023	77011775	chr4:76985023-77011775	0	+	76995881	77011775	789624	5	100,158,115,196,41,	0,10757,11401,20577,26711,
#Partially deleted in new
chr4	76987787	77011919	chr4:76987787-77011919	0	+	76987787	76987787	8553170	4	83,115,196,185,	0,8637,17813,23947,
#Partially deleted in new
chr4	77009779	77015017	chr4:77009779-77015017	0	+	77009779	77009779	8553170	3	208,187,162,	0,1955,5076,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	77014870	77021639	chr4:77014870-77021639	0	+	77014870	77014870	8553170	3	147,97,1138,	0,4294,5631,
#Partially deleted in new
chr4	77020531	77039206	chr4:77020531-77039206	0	+	77020531	77036794	789624	5	139,133,188,65,134,	0,8097,10251,16241,18541,
#Partially deleted in new
chr4	77028716	77039115	chr4:77028716-77039115	0	+	77028716	77039088	789624	3	45,188,43,	0,2066,10356,
#Partially deleted in new
chr4	77030782	77040100	chr4:77030782-77040100	0	+	77030782	77030782	8553170	2	188,358,	0,8960,
#Partially deleted in new
chr4	77030896	77039326	chr4:77030896-77039326	0	+	77030896	77030896	8553170	2	74,254,	0,8176,
#Partially deleted in new
chr4	77034923	77040152	chr4:77034923-77040152	0	+	77034923	77034923	8553170	2	97,410,	0,4819,
#Partially deleted in new
chr4	77047157	77076005	chr4:77047157-77076005	3	-	77048218	77066362	789624	7	1505,231,141,75,129,157,534,	0,7992,8804,9091,11349,19091,28314,
#Partially deleted in new
chr4	77048114	77056049	chr4:77048114-77056049	0	-	77048218	77056049	789624	2	548,88,	0,7847,
#Partially deleted in new
chr4	77055233	77056485	chr4:77055233-77056485	0	-	77055233	77055233	8553170	3	147,141,237,	0,728,1015,
#Partially deleted in new
chr4	77055322	77075693	chr4:77055322-77075693	0	-	77056043	77066362	789624	4	58,139,157,222,	0,639,10926,20149,
#Partially deleted in new
chr4	77056043	77074910	chr4:77056043-77074910	0	-	77056043	77066362	789624	5	59,75,129,157,121,	0,205,2463,10205,18746,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	77056064	77065080	chr4:77056064-77065080	0	-	77056064	77056064	8553170	4	38,75,129,368,	0,184,2442,8648,
#Partially deleted in new
chr4	77058509	77075332	chr4:77058509-77075332	0	-	77058509	77066362	789624	3	126,157,234,	0,7739,16589,
#Partially deleted in new
chr4	77058558	77075989	chr4:77058558-77075989	0	-	77058558	77075543	789624	2	77,518,	0,16913,
#Partially deleted in new
chr4	77066164	77075620	chr4:77066164-77075620	0	-	77066164	77066164	8553170	2	241,149,	0,9307,
#Deleted in new
chr4	77082402	77083126	chr4:77082402-77083126	7	-	77082402	77082402	16724991	1	724,	0,
#Deleted in new
chr4	77112494	77113458	chr4:77112494-77113458	7	-	77112494	77112494	16724991	1	964,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	77150327	77150437	chr4:77150327-77150437	3	-	77150327	77150327	8553170	1	110,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	77157150	77170059	chr4:77157150-77170059	3	+	77158532	77165924	789624	8	356,138,138,251,79,99,206,4259,	0,1382,2216,3570,4329,4498,7123,8650,
#Partially deleted in new
chr4	77157209	77166184	chr4:77157209-77166184	1	+	77158532	77165924	789624	9	27,137,138,138,251,79,99,206,384,	0,160,1323,2157,3511,4270,4439,7064,8591,
#Partially deleted in new
chr4	77158296	77166063	chr4:77158296-77166063	1	+	77158532	77165924	789624	7	374,138,251,79,99,206,263,	0,1070,2424,3183,3352,5977,7504,
#Partially deleted in new
chr4	77158355	77160926	chr4:77158355-77160926	0	+	77158532	77160926	789624	4	96,138,138,206,	0,177,1011,2365,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	77158425	77165010	chr4:77158425-77165010	1	+	77158532	77164483	789624	6	245,138,251,79,99,737,	0,941,2295,3054,3223,5848,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	77187763	77432380	chr4:77187763-77432380	0	+	77187763	77187763	8553170	5	44,57,131,145,141,	0,4447,196873,243962,244476,
#Deleted in new
chr4	77216415	77216878	chr4:77216415-77216878	7	-	77216415	77216415	16724991	1	463,	0,
#Deleted in new
chr4	77311396	77312111	chr4:77311396-77312111	7	-	77311396	77311396	16724991	1	715,	0,
#Deleted in new
chr4	77350369	77351235	chr4:77350369-77351235	7	-	77350369	77350369	16724991	1	866,	0,
#Partially deleted in new
chr4	77511752	77611834	chr4:77511752-77611834	3	+	77605865	77611039	0	5	36,106,133,81,847,	0,94071,95950,98861,99235,
#Partially deleted in new
chr4	77605831	77610922	chr4:77605831-77610922	0	+	77605831	77605831	8553170	3	98,133,309,	0,1871,4782,
#Deleted in new
chr4	77702745	77702803	chr4:77702745-77702803	3	-	77702745	77702745	8553170	1	58,	0,
#Partially deleted in new
chr4	77713386	77819390	chr4:77713386-77819390	3	-	77720430	77819237	0	12	7257,203,228,152,155,158,69,90,86,187,122,158,	0,12780,15467,18000,28754,31331,34929,43475,59694,61143,62884,105846,
#Partially deleted in new
chr4	77713386	77819368	chr4:77713386-77819368	1	-	77720430	77776382	789624	12	7257,203,228,152,155,158,69,90,86,187,122,136,	0,12780,15467,18000,28754,31331,34929,43475,59694,61143,62884,105846,
#Partially deleted in new
chr4	77718020	77819063	chr4:77718020-77819063	1	-	77720636	77776382	789624	12	2623,64,228,152,155,158,69,90,86,187,122,90,	0,8285,10833,13366,24120,26697,30295,38841,55060,56509,58250,100953,
#Partially deleted in new
chr4	77720229	77819615	chr4:77720229-77819615	1	-	77720430	77776382	789624	12	414,203,228,152,155,158,69,90,86,187,122,26,	0,5937,8624,11157,21911,24488,28086,36632,52851,54300,56041,99360,
#Partially deleted in new
chr4	77720237	77819376	chr4:77720237-77819376	0	-	77774698	77776382	789624	12	406,203,228,152,155,158,69,90,86,183,122,73,	0,5929,8616,11149,21903,24480,28078,36624,52843,54292,56033,99066,
#Partially deleted in new
chr4	77726165	77742472	chr4:77726165-77742472	0	-	77726165	77726165	8553170	5	204,228,152,155,42,	0,2688,5221,15975,16265,
#Partially deleted in new
chr4	77728876	77731881	chr4:77728876-77731881	0	-	77728876	77728876	8553170	2	205,495,	0,2510,
#Partially deleted in new
chr4	77742202	77819366	chr4:77742202-77819366	0	-	77742202	77742202	8553170	7	93,69,90,86,187,122,134,	0,6113,14659,30878,32327,34068,77030,
#Partially deleted in new
chr4	77756861	77819390	chr4:77756861-77819390	0	-	77756861	77776382	789624	5	90,86,187,122,87,	0,16219,17668,19409,62442,
#Partially deleted in new
chr4	77862519	77952790	chr4:77862519-77952790	3	+	77862848	77952607	789624	9	360,112,259,84,72,112,107,82,302,	0,9224,20722,22736,24700,31619,46746,87277,89969,
#Partially deleted in new
chr4	77862829	77883498	chr4:77862829-77883498	0	+	77862829	77862829	8553170	2	50,257,	0,20412,
#Partially deleted in new
chr4	77862867	77885318	chr4:77862867-77885318	0	+	77862867	77862867	8553170	4	146,112,259,63,	0,8876,20374,22388,
#Deleted in new
chr4	77864507	77864804	chr4:77864507-77864804	7	-	77864507	77864507	16724991	1	297,	0,
#Partially deleted in new
chr4	77883238	77952749	chr4:77883238-77952749	0	+	77883238	77952545	789624	6	262,84,72,112,107,261,	0,2017,3981,10900,26027,69250,
#Partially deleted in new
chr4	77883248	77909312	chr4:77883248-77909312	0	+	77883248	77883248	8553170	6	252,84,72,112,265,47,	0,2007,3971,10890,23697,26017,
#Deleted in new
chr4	77957999	77958780	chr4:77957999-77958780	7	-	77957999	77957999	16724991	1	781,	0,
#Deleted in new
chr4	77963939	77964511	chr4:77963939-77964511	7	+	77963939	77963939	16724991	1	572,	0,
#Deleted in new
chr4	77987859	77988813	chr4:77987859-77988813	7	-	77987859	77987859	16724991	1	954,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	78003142	78003439	chr4:78003142-78003439	7	+	78003142	78003142	16724991	1	297,	0,
#Deleted in new
chr4	78008511	78008688	chr4:78008511-78008688	7	-	78008511	78008511	16724991	1	177,	0,
#Partially deleted in new
chr4	78057569	78446558	chr4:78057569-78446558	1	+	78058009	78445787	789624	42	516,32,108,93,160,134,84,102,192,90,36,148,144,135,144,141,141,177,141,144,153,147,147,141,141,141,271,85,327,154,179,117,115,138,33,132,126,248,149,163,136,1037,	0,8415,179940,187663,194822,197672,207455,209264,209671,221085,223828,225250,226835,228835,250496,258024,259798,261240,275702,280104,305943,306338,312268,315148,316541,318169,322156,326489,329805,343164,350093,355399,361379,364293,366818,371525,372722,374787,381000,381332,383592,387952,
#Partially deleted in new
chr4	78057569	78544269	chr4:78057569-78544269	3	+	78058009	78541124	789624	74	516,32,108,93,160,134,84,102,192,90,36,148,144,135,144,141,141,177,141,144,153,147,147,141,141,141,271,85,327,154,179,117,115,138,33,132,126,248,149,163,136,191,154,264,189,120,180,125,141,228,114,151,160,169,247,345,161,148,206,157,201,188,276,233,161,215,151,108,160,117,167,206,147,3739,	0,8415,179940,187663,194822,197672,207455,209264,209671,221085,223828,225250,226835,228835,250496,258024,259798,261240,275702,280104,305943,306338,312268,315148,316541,318169,322156,326489,329805,343164,350093,355399,361379,364293,366818,371525,372722,374787,381000,381332,383592,387952,389157,390483,392581,394202,394605,406451,406873,408638,412408,414610,415868,417868,420245,421804,424234,424818,431305,439235,442151,449851,451161,453704,455822,458229,461761,463953,465079,468971,476879,479425,481724,482961,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	78057603	78072107	chr4:78057603-78072107	0	+	78058009	78068564	789624	4	482,32,137,1646,	0,8381,10949,12858,
#Deleted in new
chr4	78180865	78182046	chr4:78180865-78182046	7	-	78180865	78180865	16724991	1	1181,	0,
#Partially deleted in new
chr4	78245230	78319653	chr4:78245230-78319653	0	+	78245230	78319436	789624	16	95,160,134,84,102,192,90,36,148,144,135,144,141,141,177,294,	0,7161,10011,19794,21603,22010,33424,36167,37589,39174,41174,62835,70363,72137,73579,74129,
#Partially deleted in new
chr4	78255245	78338037	chr4:78255245-78338037	0	+	78255245	78337825	789624	15	130,84,102,192,90,36,148,144,135,144,141,141,177,141,364,	0,9779,11588,11995,23409,26152,27574,29159,31159,52820,60348,62122,63564,78026,82428,
#Deleted in new
chr4	78379196	78379514	chr4:78379196-78379514	7	+	78379196	78379196	16724991	1	318,	0,
#Partially deleted in new
chr4	78419037	78446633	chr4:78419037-78446633	0	+	78419037	78445787	789624	9	26,33,132,126,248,149,163,136,1112,	0,5350,10057,11254,13319,19532,19864,22124,26484,
#Partially deleted in new
chr4	78448057	78450455	chr4:78448057-78450455	0	+	78448057	78448057	8553170	2	259,305,	0,2093,
#Partially deleted in new
chr4	78551518	78610421	chr4:78551518-78610421	3	+	78554473	78610115	0	13	341,53,88,95,114,91,80,57,94,96,59,123,366,	0,2917,21661,27508,30658,34741,40025,43862,44275,45800,49991,52758,58537,
#Partially deleted in new
chr4	78551746	78610415	chr4:78551746-78610415	1	+	78579040	78610115	789624	12	113,53,95,114,91,80,57,94,96,59,123,360,	0,2689,27280,30430,34513,39797,43634,44047,45572,49763,52530,58309,
#Partially deleted in new
chr4	78551756	78595887	chr4:78551756-78595887	0	+	78554473	78595887	789624	4	103,53,57,94,	0,2679,43624,44037,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr4	78551757	78610386	chr4:78551757-78610386	1	+	78579040	78610115	789624	14	102,53,141,88,95,114,91,80,57,94,96,59,123,331,	0,2678,19275,21422,27269,30419,34502,39786,43623,44036,45561,49752,52519,58298,
#Partially deleted in new
chr4	78551769	78582421	chr4:78551769-78582421	0	+	78551769	78551769	8553170	5	90,53,88,95,245,	0,2666,21410,27257,30407,
#Partially deleted in new
chr4	78551826	78582291	chr4:78551826-78582291	0	+	78554473	78582291	789624	6	33,161,53,88,95,115,	0,358,2609,21353,27200,30350,
#Partially deleted in new
chr4	78551966	78591603	chr4:78551966-78591603	0	+	78554473	78591603	789624	7	379,53,88,95,114,91,60,	0,2469,21213,27060,30210,34293,39577,
#Partially deleted in new
chr4	78553919	78586350	chr4:78553919-78586350	0	+	78554473	78586350	789624	6	126,53,88,95,114,91,	0,516,19260,25107,28257,32340,
#Partially deleted in new
chr4	78597072	78610363	chr4:78597072-78610363	0	+	78597072	78597072	8553170	4	342,59,123,308,	0,4437,7204,12983,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	78601863	78610451	chr4:78601863-78610451	0	+	78601863	78601863	8553170	2	2536,396,	0,8192,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	78632272	78632385	chr4:78632272-78632385	3	-	78632272	78632272	8553170	1	113,	0,
#Partially deleted in new
chr4	78645902	78663304	chr4:78645902-78663304	0	+	78645902	78645902	8553170	3	361,109,387,	0,3698,17015,
#Partially deleted in new
chr4	78645993	78680895	chr4:78645993-78680895	0	+	78645993	78645993	789624	4	270,109,72,135,	0,3607,27349,34767,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	78646183	78682663	chr4:78646183-78682663	0	+	78646183	78646183	789624	4	80,109,94,1903,	0,3417,16734,34577,
#Partially deleted in new
chr4	78646185	78682392	chr4:78646185-78682392	3	+	78646185	78646185	789624	5	78,109,94,72,1632,	0,3415,16732,27157,34575,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	78646216	78682699	chr4:78646216-78682699	0	+	78646216	78646216	8553170	3	47,109,1939,	0,3384,34544,
#Deleted in new
chr4	78648953	78649242	chr4:78648953-78649242	7	-	78648953	78648953	16724991	1	289,	0,
#Deleted in new
chr4	78768498	78768750	chr4:78768498-78768750	7	+	78768498	78768498	16724991	1	252,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	78773653	78775973	chr4:78773653-78775973	3	-	78773653	78773653	8553170	1	2320,	0,
#Partially deleted in new
chr4	78776341	78879435	chr4:78776341-78879435	0	+	78776543	78861425	789624	15	380,119,106,143,122,82,133,104,44,80,164,278,99,185,702,	0,49695,57240,66043,68586,70846,74582,83242,83694,85047,89215,94441,95508,96272,102392,
#Partially deleted in new
chr4	78776377	78912185	chr4:78776377-78912185	3	+	78776543	78912033	0	16	344,119,106,143,122,82,133,104,80,164,278,99,185,158,111,1576,	0,49659,57204,66007,68550,70810,74546,83206,85011,89179,94405,95472,96236,102356,110796,134232,
#Partially deleted in new
chr4	78776377	78879969	chr4:78776377-78879969	1	+	78776543	78878929	0	14	344,119,106,143,122,82,133,104,80,164,278,99,185,1236,	0,49659,57204,66007,68550,70810,74546,83206,85011,89179,94405,95472,96236,102356,
#Partially deleted in new
chr4	78776377	78912185	chr4:78776377-78912185	1	+	78776543	78861425	789624	17	344,119,106,143,122,82,133,104,44,80,164,278,99,185,158,111,1576,	0,49659,57204,66007,68550,70810,74546,83206,83658,85011,89179,94405,95472,96236,102356,110796,134232,
#Partially deleted in new
chr4	78850891	78865773	chr4:78850891-78865773	0	+	78850891	78850891	8553170	4	165,104,80,217,	0,8692,10497,14665,
#Deleted in new
chr4	78859166	78861469	chr4:78859166-78861469	0	+	78859166	78859166	8553170	2	521,81,	0,2222,
#Partially deleted in new
chr4	78859623	78916372	chr4:78859623-78916372	0	+	78859623	78912033	789624	9	64,80,164,278,99,185,158,111,5763,	0,1765,5933,11159,12226,12990,19110,27550,50986,
#Partially deleted in new
chr4	78872327	78879432	chr4:78872327-78879432	0	+	78872327	78872327	8553170	2	471,699,	0,6406,
#Partially deleted in new
chr4	78887126	78939394	chr4:78887126-78939394	0	-	78922900	78939224	789624	13	183,88,54,161,120,148,281,155,91,198,156,163,355,	0,934,18981,28083,30634,33407,35014,35702,36730,39394,43043,47994,51913,
#Partially deleted in new
chr4	78887126	78939359	chr4:78887126-78939359	0	-	78930243	78939224	789624	9	183,54,161,120,148,91,198,156,320,	0,18981,28083,30634,33407,36730,39394,43043,51913,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	78898854	78899154	chr4:78898854-78899154	3	+	78898854	78898854	8553170	1	300,	0,
#Partially deleted in new
chr4	78910837	78939225	chr4:78910837-78939225	2	-	78920538	78939224	789624	8	1226,120,148,91,198,156,163,186,	0,6923,9696,13019,15683,19332,24283,28202,
#Partially deleted in new
chr4	78911877	78939438	chr4:78911877-78939438	1	-	78920538	78939224	789624	6	8804,91,198,156,163,399,	0,11979,14643,18292,23243,27162,
#Partially deleted in new
chr4	78914808	78926642	chr4:78914808-78926642	0	-	78914808	78914808	8553170	3	562,120,122,	0,2952,11712,
#Partially deleted in new
chr4	78915197	78926604	chr4:78915197-78926604	0	-	78915197	78915197	8553170	4	173,139,91,84,	0,2563,8659,11323,
#Partially deleted in new
chr4	78917939	78939403	chr4:78917939-78939403	0	-	78922404	78939224	789624	7	2742,281,91,198,156,163,364,	0,4201,5917,8581,12230,17181,21100,
#Partially deleted in new
chr4	78917941	78939224	chr4:78917941-78939224	0	-	78930243	78939224	789624	5	2740,91,198,156,185,	0,5915,8579,12228,21098,
#Partially deleted in new
chr4	78923516	78926609	chr4:78923516-78926609	0	-	78923516	78923516	8553170	2	431,89,	0,3004,
#Partially deleted in new
chr4	78923916	78939195	chr4:78923916-78939195	0	-	78923916	78923916	8553170	5	31,198,156,56,156,	0,2604,6253,11204,15123,
#Partially deleted in new
chr4	78926599	78930620	chr4:78926599-78930620	0	-	78926599	78926599	8553170	2	119,451,	0,3570,
#Partially deleted in new
chr4	78926673	78939231	chr4:78926673-78939231	0	-	78933209	78939224	789624	4	45,156,156,192,	0,3496,6402,12366,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	78971747	79308544	chr4:78971747-79308544	3	+	78971747	78971747	789624	6	129,53,167,97,38,272,	0,1252,114348,224088,334943,336525,
#Partially deleted in new
chr4	78971747	79308472	chr4:78971747-79308472	0	+	78971747	78971747	8553170	4	129,167,38,200,	0,114348,334943,336525,
#Partially deleted in new
chr4	79085238	79308653	chr4:79085238-79308653	0	+	79085238	79085238	8553170	4	109,167,38,381,	0,857,221452,223034,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	79195833	79299565	chr4:79195833-79299565	0	+	79195833	79195833	8553170	2	99,565,	0,103167,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	79195835	79227956	chr4:79195835-79227956	0	+	79195835	79195835	8553170	2	97,745,	0,31376,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	79195836	79308755	chr4:79195836-79308755	1	+	79195836	79195836	8553170	4	96,38,168,483,	0,110854,111227,112436,
#Partially deleted in new
chr4	79197540	79308655	chr4:79197540-79308655	0	+	79197540	79197540	8553170	3	104,38,383,	0,109150,110732,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	79211680	79245532	chr4:79211680-79245532	1	+	79211680	79211680	8553170	2	124,849,	0,33003,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	79211684	79227886	chr4:79211684-79227886	1	+	79211684	79211684	8553170	2	120,675,	0,15527,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	79225979	79325468	chr4:79225979-79325468	0	-	79225979	79225979	8553170	2	291,293,	0,99196,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	79258780	79308654	chr4:79258780-79308654	0	+	79258780	79258780	8553170	3	259,38,382,	0,47910,49492,
#Partially deleted in new
chr4	79305122	79308798	chr4:79305122-79308798	0	+	79305122	79305122	8553170	3	60,38,526,	0,1568,3150,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	79316652	79326050	chr4:79316652-79326050	3	-	79325187	79325877	789624	2	1139,875,	0,8523,
#Deleted in new
chr4	79406351	79408293	chr4:79406351-79408293	3	-	79406538	79408200	789624	1	1942,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	79492415	79576460	chr4:79492415-79576460	3	+	79492415	79492415	8553170	4	208,434,118,1320,	0,736,21369,82725,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	79492592	79576458	chr4:79492592-79576458	0	+	79492592	79492592	789624	4	182,434,118,1318,	0,559,21192,82548,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	79587301	79588091	chr4:79587301-79588091	7	-	79587301	79587301	16724991	1	790,	0,
#Deleted in new
chr4	79587756	79588130	chr4:79587756-79588130	5	-	79587756	79587756	16724991	1	374,	0,
#Deleted in new
chr4	79596541	79597173	chr4:79596541-79597173	3	+	79596541	79596541	8553170	2	58,297,	0,335,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	79663760	79696837	chr4:79663760-79696837	3	+	79663760	79663760	8553170	4	88,139,89,425,	0,4228,26227,32652,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	79827470	79863247	chr4:79827470-79863247	1	+	79827470	79827470	789624	2	133,1958,	0,33819,
#Partially deleted in new
chr4	79827534	79877770	chr4:79827534-79877770	3	+	79827534	79827534	8553170	3	69,148,156,	0,33755,50080,
#Deleted in new
chr4	79843101	79843228	chr4:79843101-79843228	3	+	79843101	79843101	8553170	1	127,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr4	79901148	80073086	chr4:79901148-80073086	3	-	79907428	80072560	0	17	6319,81,168,93,45,96,79,70,99,61,81,69,108,82,72,72,678,	0,76472,76858,82729,83670,107372,117749,130474,132323,134823,153123,154001,154211,154783,168287,170434,171260,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr4	79905570	80071620	chr4:79905570-80071620	0	-	80024652	80069500	789624	18	602,63,81,168,93,45,96,79,119,70,99,61,81,69,108,82,72,38,	0,1834,72050,72436,78307,79248,102950,113327,119066,126052,127901,130401,148701,149579,149789,150361,163865,166012,
#Partially deleted in new
chr4	79906761	79964890	chr4:79906761-79964890	0	-	79906761	79906761	8553170	2	706,226,	0,57903,
#Partially deleted in new
chr4	79907169	79965097	chr4:79907169-79965097	0	-	79907169	79907169	8553170	2	298,259,	0,57669,
#Partially deleted in new
chr4	79907352	80073472	chr4:79907352-80073472	1	-	79907428	80069500	789624	17	115,81,168,93,45,96,79,70,99,61,81,69,108,82,72,72,78,	0,70268,70654,76525,77466,101168,111545,124270,126119,128619,146919,147797,148007,148579,162083,164230,166042,
#Partially deleted in new
chr4	79977536	80072700	chr4:79977536-80072700	1	-	79977578	80072560	0	12	165,168,93,45,96,81,69,108,82,72,72,292,	0,470,6341,7282,30984,76735,77613,77823,78395,91899,94046,94872,
#Partially deleted in new
chr4	79977578	80072563	chr4:79977578-80072563	1	-	79977578	80072560	0	16	123,168,93,45,96,79,70,99,61,81,69,108,82,72,72,155,	0,428,6299,7240,30942,41319,54044,55893,58393,76693,77571,77781,78353,91857,94004,94830,
#Partially deleted in new
chr4	80054280	80079600	chr4:80054280-80079600	0	-	80054280	80054280	8553170	5	72,69,108,82,248,	0,869,1079,1651,25072,
#Deleted in new
chr4	80079531	80081122	chr4:80079531-80081122	7	+	80079531	80079531	16724991	1	1591,	0,
#Deleted in new
chr4	80161128	80162011	chr4:80161128-80162011	7	+	80161128	80161128	16724991	1	883,	0,
#Deleted in new
chr4	80183279	80190169	chr4:80183279-80190169	3	-	80183279	80183279	8553170	2	145,421,	0,6469,
#Deleted in new
chr4	80183878	80196598	chr4:80183878-80196598	0	+	80183878	80183878	8553170	4	177,98,127,247,	0,7593,10234,12473,
#Deleted in new
chr4	80183880	80197121	chr4:80183880-80197121	0	+	80183880	80183880	8553170	3	175,250,159,	0,12471,13082,
#Deleted in new
chr4	80184263	80196419	chr4:80184263-80196419	0	+	80184263	80184263	8553170	4	88,127,112,68,	0,9849,11749,12088,
#Deleted in new
chr4	80184284	80204329	chr4:80184284-80204329	3	+	80200080	80203532	789624	8	67,127,250,254,139,221,232,2416,	0,9828,12067,12678,13340,15794,17005,17629,
#Deleted in new
chr4	80184284	80197195	chr4:80184284-80197195	0	+	80184284	80184284	8553170	4	67,127,250,233,	0,9828,12067,12678,
#Deleted in new
chr4	80184301	80196601	chr4:80184301-80196601	0	+	80184301	80184301	8553170	6	50,104,154,98,127,250,	0,348,1063,7170,9811,12050,
#Deleted in new
chr4	80185269	80204326	chr4:80185269-80204326	1	+	80200080	80203532	789624	10	249,98,127,112,250,254,139,221,232,2413,	0,6202,8843,10743,11082,11693,12355,14809,16020,16644,
#Deleted in new
chr4	80185269	80202745	chr4:80185269-80202745	0	+	80200080	80202745	789624	10	249,98,127,112,250,254,139,221,232,832,	0,6202,8843,10743,11082,11693,12355,14809,16020,16644,
#Deleted in new
chr4	80185367	80196497	chr4:80185367-80196497	0	+	80185367	80185367	8553170	5	151,98,127,112,146,	0,6104,8745,10645,10984,
#Deleted in new
chr4	80197503	80204324	chr4:80197503-80204324	1	+	80200080	80203532	789624	4	260,221,232,2411,	0,2575,3786,4410,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	80266598	80290194	chr4:80266598-80290194	3	+	80266824	80286672	789624	3	581,104,3870,	0,8310,19726,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	80266638	80291017	chr4:80266638-80291017	1	+	80266824	80286341	789624	2	541,4693,	0,19686,
#Deleted in new
chr4	80266824	80268518	chr4:80266824-80268518	0	+	80266824	80266824	8553170	2	355,35,	0,1659,
#Partially deleted in new
chr4	80266941	80336680	chr4:80266941-80336680	0	+	80266941	80301300	789624	5	238,104,47,136,133,	0,7967,34341,68802,69606,
#Partially deleted in new
chr4	80268264	80288958	chr4:80268264-80288958	0	+	80268264	80268264	8553170	3	304,104,2634,	0,6644,18060,
#Partially deleted in new
chr4	80335719	80963756	chr4:80335719-80963756	3	+	80335768	80963612	789624	6	160,131,91,143,130,240,	0,27034,247373,534273,609090,627797,
#Partially deleted in new
chr4	80335742	80790507	chr4:80335742-80790507	0	+	80335742	80335742	8553170	4	137,131,91,133,	0,27011,247350,454632,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	80335767	80873074	chr4:80335767-80873074	0	+	80335768	80870012	789624	6	112,131,91,118,143,2754,	0,26986,247325,303950,534225,534553,
#Partially deleted in new
chr4	80335768	80963612	chr4:80335768-80963612	1	+	80335768	80963612	789624	7	111,131,91,51,143,130,96,	0,26985,247324,272564,534224,609041,627748,
#Partially deleted in new
chr4	80335780	80583291	chr4:80335780-80583291	0	+	80335780	80335780	8553170	3	99,131,199,	0,26973,247312,
#Partially deleted in new
chr4	80386177	80388716	chr4:80386177-80388716	7	-	80386177	80386177	16724991	1	2539,	0,
#Partially deleted in new
chr4	80870048	80963697	chr4:80870048-80963697	0	+	80870048	80870048	8553170	2	87,181,	0,93468,
#Partially deleted in new
chr4	80944807	80963612	chr4:80944807-80963612	1	+	80944807	80963612	789624	2	132,96,	0,18709,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	81030964	81057531	chr4:81030964-81057531	3	+	81031284	81053536	0	3	636,911,4187,	0,14773,22380,
#Partially deleted in new
chr4	81087369	81215117	chr4:81087369-81215117	3	-	81089707	81205047	0	19	2434,67,63,123,164,142,90,137,154,99,69,95,78,64,106,114,167,474,182,	0,5016,17000,18443,23078,47785,50023,53163,55424,56862,61514,64590,66274,79791,82293,84321,87423,117217,127566,
#Partially deleted in new
chr4	81087369	81153732	chr4:81087369-81153732	1	-	81089707	81142940	789624	14	2434,67,63,123,164,142,90,137,154,99,69,95,126,89,	0,5016,17000,18443,23078,47785,50023,53163,55424,56862,61514,64590,66060,66274,
#Partially deleted in new
chr4	81088682	81215034	chr4:81088682-81215034	1	-	81089707	81205047	0	19	1121,67,63,123,164,142,90,137,154,99,69,95,78,64,106,114,167,474,104,	0,3703,15687,17130,21765,46472,48710,51850,54111,55549,60201,63277,64961,78478,80980,83008,86110,115904,126248,
#Partially deleted in new
chr4	81089428	81215064	chr4:81089428-81215064	1	-	81089707	81205047	0	19	375,67,63,123,164,142,90,137,67,99,69,95,78,64,106,114,167,474,129,	0,2957,14941,16384,21019,45726,47964,51104,53452,54803,59455,62531,64215,77732,80234,82262,85364,115158,125507,
#Partially deleted in new
chr4	81164939	81193395	chr4:81164939-81193395	3	+	81164939	81164939	789624	5	59,172,148,67,336,	0,8819,10504,27240,28120,
#Partially deleted in new
chr4	81173874	81193180	chr4:81173874-81193180	0	+	81173874	81173874	8553170	5	56,148,40,67,121,	0,1569,2123,18305,19185,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	81334302	81334418	chr4:81334302-81334418	3	+	81334302	81334302	8553170	1	116,	0,
#Partially deleted in new
chr4	81426392	81471236	chr4:81426392-81471236	1	-	81427767	81459508	789624	14	1400,73,124,96,96,80,103,96,75,213,138,123,183,216,	0,5906,7447,8246,14441,15904,19133,19350,21111,21676,30258,31106,32939,44628,
#Partially deleted in new
chr4	81427064	81471915	chr4:81427064-81471915	3	-	81427767	81459508	789624	14	728,73,124,96,96,80,103,96,75,216,138,123,183,146,	0,5234,6775,7574,13769,15232,18461,18678,20439,21004,29586,30434,32267,44705,
#Partially deleted in new
chr4	81427064	82044069	chr4:81427064-82044069	1	-	81427767	82044069	789624	17	728,73,124,96,96,80,103,96,75,216,138,123,183,84,54,48,69,	0,5234,6775,7574,13769,15232,18461,18678,20439,21004,29586,30434,32267,175774,397453,488246,616936,
#Partially deleted in new
chr4	81427448	81471904	chr4:81427448-81471904	1	-	81427767	81459508	789624	13	344,73,124,96,96,80,103,96,75,213,138,183,135,	0,4850,6391,7190,13385,14848,18077,18294,20055,20620,29202,31883,44321,
#Partially deleted in new
chr4	81434675	81471907	chr4:81434675-81471907	0	-	81434675	81448257	789624	8	59,96,80,103,96,75,213,138,	0,6158,7621,10850,11067,12828,13393,37094,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	81450892	81471890	chr4:81450892-81471890	1	-	81456455	81459508	789624	4	5896,123,183,121,	0,6606,8439,20877,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	81450893	81471890	chr4:81450893-81471890	1	-	81456455	81459508	789624	5	1482,1576,123,183,121,	0,4319,6605,8438,20876,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	81452028	81457602	chr4:81452028-81457602	0	-	81452028	81452028	8553170	3	406,138,104,	0,4622,5470,
#Partially deleted in new
chr4	81458982	81471928	chr4:81458982-81471928	0	-	81458982	81458982	8553170	2	532,159,	0,12787,
#Partially deleted in new
chr4	81459478	82044244	chr4:81459478-82044244	0	-	81521491	82044069	789624	5	36,134,54,48,244,	0,61933,365039,455832,584522,
#Partially deleted in new
chr4	81602731	82044244	chr4:81602731-82044244	1	-	81602733	82044069	789624	4	191,54,48,244,	0,221786,312579,441269,
#Partially deleted in new
chr4	81602870	82044244	chr4:81602870-82044244	0	-	81602870	81602870	8553170	5	52,100,54,48,244,	0,32927,221647,312440,441130,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	81602873	82044244	chr4:81602873-82044244	0	-	81602873	81602873	8553170	6	49,100,54,44,48,244,	0,32924,221644,291707,312437,441127,
#Partially deleted in new
chr4	81635822	82044244	chr4:81635822-82044244	0	-	81635822	81635822	8553170	5	75,83,54,48,244,	0,166984,188695,279488,408178,
#Deleted in new
chr4	81733384	81734207	chr4:81733384-81734207	7	-	81733384	81733384	16724991	1	823,	0,
#Deleted in new
chr4	81919994	81920387	chr4:81919994-81920387	7	-	81919994	81919994	16724991	1	393,	0,
#Deleted in new
chr4	81928312	81928439	chr4:81928312-81928439	3	+	81928312	81928312	8553170	1	127,	0,
#Partially deleted in new
chr4	82010664	82013095	chr4:82010664-82013095	7	-	82010664	82010664	16724991	3	553,141,137,	0,1609,2294,
#Partially deleted in new
chr4	82128534	82129656	chr4:82128534-82129656	7	+	82128534	82128534	16724991	1	1122,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	82174546	82174653	chr4:82174546-82174653	3	+	82174546	82174546	8553170	1	107,	0,
#Partially deleted in new
chr4	82275070	82276600	chr4:82275070-82276600	7	+	82275070	82275070	16724991	1	1530,	0,
#Partially deleted in new
chr4	82284970	82297513	chr4:82284970-82297513	5	+	82284970	82284970	16724991	4	160,107,97,212,	0,542,10720,12331,
#Partially deleted in new
chr4	82285052	82340013	chr4:82285052-82340013	7	+	82285052	82285052	16724991	6	78,71,97,138,159,140,	0,5451,10638,12344,35274,54821,
#Deleted in new
chr4	82344875	82345540	chr4:82344875-82345540	3	-	82344875	82344875	8553170	1	665,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	82352497	82373956	chr4:82352497-82373956	3	-	82355333	82373678	0	9	1657,98,147,100,132,162,169,57,511,	0,2806,4039,4298,4815,6161,6973,19030,20948,
#Partially deleted in new
chr4	82353828	82373986	chr4:82353828-82373986	1	-	82355333	82373678	0	8	326,98,100,132,162,169,57,541,	0,1475,2967,3484,4830,5642,17699,19617,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	82353828	82358842	chr4:82353828-82358842	0	-	82353828	82353828	8553170	2	3067,1530,	0,3484,
#Partially deleted in new
chr4	82353833	82373983	chr4:82353833-82373983	1	-	82355333	82373678	0	8	321,98,147,100,132,162,169,538,	0,1470,2703,2962,3479,4825,5637,19612,
#Partially deleted in new
chr4	82353833	82359639	chr4:82353833-82359639	0	-	82355333	82359639	789624	7	321,107,98,100,132,162,169,	0,1061,1470,2962,3479,4825,5637,
#Deleted in new
chr4	82354846	82357392	chr4:82354846-82357392	0	-	82354846	82354846	8553170	3	555,100,80,	0,1949,2466,
#Partially deleted in new
chr4	82355248	82373991	chr4:82355248-82373991	0	-	82358792	82373678	789624	6	153,147,100,132,162,546,	0,1288,1547,2064,3410,18197,
#Partially deleted in new
chr4	82356553	82373150	chr4:82356553-82373150	0	-	82356553	82373150	789624	7	130,100,132,162,169,57,32,	0,242,759,2105,2917,14974,16565,
#Partially deleted in new
chr4	82357402	82374144	chr4:82357402-82374144	0	-	82357402	82373678	789624	6	42,162,169,57,292,26,	0,1256,2068,14125,16043,16716,
#Partially deleted in new
chr4	82357436	82374503	chr4:82357436-82374503	0	-	82357436	82359635	789624	4	8,162,169,206,	0,1222,2034,16861,
#Partially deleted in new
chr4	82358757	82374161	chr4:82358757-82374161	0	-	82358757	82373678	789624	4	63,169,332,43,	0,713,14688,15361,
#Partially deleted in new
chr4	82359515	82373985	chr4:82359515-82373985	0	-	82359515	82373678	789624	4	124,57,41,361,	0,12012,13930,14109,
#Partially deleted in new
chr4	82374300	82374912	chr4:82374300-82374912	1	+	82374300	82374300	8553170	1	612,	0,
#Partially deleted in new
chr4	82374401	82384027	chr4:82374401-82384027	3	+	82374401	82374401	8553170	2	325,294,	0,9332,
#Deleted in new
chr4	82401577	82402456	chr4:82401577-82402456	7	-	82401577	82401577	16724991	1	879,	0,
#Deleted in new
chr4	82402637	82402706	chr4:82402637-82402706	3	-	82402637	82402637	8553170	1	69,	0,
#Deleted in new
chr4	82422563	82429866	chr4:82422563-82429866	1	-	82426058	82429690	789624	8	2320,93,171,115,132,162,169,619,	0,3473,3899,4626,4869,5454,5714,6684,
#Deleted in new
chr4	82422564	82430225	chr4:82422564-82430225	1	-	82426058	82429690	789624	7	2319,93,115,132,162,169,978,	0,3472,4625,4868,5453,5713,6683,
#Deleted in new
chr4	82422564	82430225	chr4:82422564-82430225	3	-	82426058	82429690	789624	8	2319,93,171,115,132,162,169,978,	0,3472,3898,4625,4868,5453,5713,6683,
#Deleted in new
chr4	82424624	82429397	chr4:82424624-82429397	1	-	82426058	82429333	789624	7	1505,171,115,132,162,169,150,	0,1838,2565,2808,3393,3653,4623,
#Deleted in new
chr4	82424628	82429447	chr4:82424628-82429447	0	-	82426058	82429333	789624	9	255,105,93,171,115,132,162,169,200,	0,934,1408,1834,2561,2804,3389,3649,4619,
#Deleted in new
chr4	82424628	82430401	chr4:82424628-82430401	0	-	82426058	82429690	789624	9	255,105,93,171,115,132,162,169,1154,	0,934,1408,1834,2561,2804,3389,3649,4619,
#Deleted in new
chr4	82424628	82429441	chr4:82424628-82429441	1	-	82426058	82429333	789624	8	255,93,171,115,132,162,169,194,	0,1408,1834,2561,2804,3389,3649,4619,
#Deleted in new
chr4	82424629	82430408	chr4:82424629-82430408	0	-	82426058	82429333	789624	10	254,105,93,171,115,132,162,169,165,67,	0,933,1407,1833,2560,2803,3388,3648,4618,5712,
#Deleted in new
chr4	82424630	82430399	chr4:82424630-82430399	1	-	82426058	82429333	789624	9	253,93,171,115,132,162,169,165,58,	0,1406,1832,2559,2802,3387,3647,4617,5711,
#Deleted in new
chr4	82425582	82429425	chr4:82425582-82429425	0	-	82427476	82429333	789624	5	547,171,115,132,178,	0,880,1607,1850,3665,
#Partially deleted in new
chr4	82430561	82461091	chr4:82430561-82461091	3	+	82430829	82460120	0	6	352,102,203,133,124,1111,	0,17358,20481,24160,26353,29419,
#Partially deleted in new
chr4	82430647	82461055	chr4:82430647-82461055	1	+	82451120	82460120	789624	6	237,102,203,133,124,1075,	0,17272,20395,24074,26267,29333,
#Partially deleted in new
chr4	82430661	82461087	chr4:82430661-82461087	1	+	82454770	82460120	0	5	223,102,133,124,1107,	0,17258,24060,26253,29319,
#Partially deleted in new
chr4	82451069	82461090	chr4:82451069-82461090	1	+	82451120	82460049	789624	5	176,133,124,56,1053,	0,3652,5845,8911,8968,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	82483169	82562357	chr4:82483169-82562357	3	-	82485510	82504657	789624	8	2550,178,128,68,33,54,90,195,	0,6891,12898,19557,19725,19889,21408,78993,
#Partially deleted in new
chr4	82484589	82562214	chr4:82484589-82562214	1	-	82485510	82504657	789624	8	1130,178,128,68,33,54,90,309,	0,5471,11478,18137,18305,18469,19988,77316,
#Partially deleted in new
chr4	82490084	82561955	chr4:82490084-82561955	1	-	82490227	82504657	789624	7	154,117,68,33,54,90,50,	0,5994,12642,12810,12974,14493,71821,
#Partially deleted in new
chr4	82490822	82491635	chr4:82490822-82491635	7	-	82490822	82490822	16724991	1	813,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	82494785	82496278	chr4:82494785-82496278	7	-	82494785	82494785	16724991	1	1493,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	82494836	82495893	chr4:82494836-82495893	5	-	82494836	82494836	16724991	1	1057,	0,
#Partially deleted in new
chr4	82571136	82571814	chr4:82571136-82571814	7	+	82571136	82571136	16724991	2	81,281,	0,397,
#Deleted in new
chr4	82580116	82581384	chr4:82580116-82581384	7	-	82580116	82580116	16724991	1	1268,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	82613112	82621437	chr4:82613112-82621437	3	-	82613112	82613112	789624	4	272,223,189,226,	0,759,1780,8099,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	82613112	82621437	chr4:82613112-82621437	0	-	82613112	82613112	789624	4	272,223,127,226,	0,759,1780,8099,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	82629538	82798857	chr4:82629538-82798857	3	-	82631326	82798537	789624	5	1979,233,206,131,552,	0,7052,51168,75744,168767,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	82659886	82798772	chr4:82659886-82798772	1	-	82660875	82798537	789624	4	1191,206,131,467,	0,20820,45396,138419,
#Partially deleted in new
chr4	82691736	82692468	chr4:82691736-82692468	7	+	82691736	82691736	16724991	1	732,	0,
#Partially deleted in new
chr4	82753336	82753430	chr4:82753336-82753430	3	-	82753336	82753336	5263520	1	94,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	82775460	82776101	chr4:82775460-82776101	7	+	82775460	82775460	16724991	2	119,241,	0,400,
#Partially deleted in new
chr4	82818660	82891136	chr4:82818660-82891136	1	-	82819073	82881936	0	25	593,72,120,264,59,342,124,174,174,146,127,179,76,75,237,153,162,100,143,141,96,199,124,83,49,	0,2376,5894,8708,10339,23479,25725,30143,32770,34909,36242,38291,39028,44657,45701,48147,48494,51664,53283,55950,57066,60069,62138,63197,72427,
#Partially deleted in new
chr4	82818660	82891266	chr4:82818660-82891266	1	-	82819073	82881936	0	27	593,72,120,264,59,342,124,174,174,146,127,179,76,78,39,75,237,153,162,100,143,141,96,199,124,83,179,	0,2376,5894,8708,10339,23479,25725,30143,32770,34909,36242,38291,39028,42970,43873,44657,45701,48147,48494,51664,53283,55950,57066,60069,62138,63197,72427,
#Partially deleted in new
chr4	82818660	82844460	chr4:82818660-82844460	0	-	82819073	82844460	789624	8	593,72,120,264,59,39,342,75,	0,2376,5894,8708,10339,12276,23479,25725,
#Partially deleted in new
chr4	82818660	82891153	chr4:82818660-82891153	1	-	82819073	82881936	0	24	593,72,120,264,59,124,174,174,146,127,179,76,75,237,153,162,100,143,141,96,199,124,83,66,	0,2376,5894,8708,10339,25725,30143,32770,34909,36242,38291,39028,44657,45701,48147,48494,51664,53283,55950,57066,60069,62138,63197,72427,
#Partially deleted in new
chr4	82818661	82891259	chr4:82818661-82891259	1	-	82819073	82881936	0	26	592,72,120,264,59,124,174,174,146,127,179,76,78,39,75,237,153,162,100,143,141,96,199,124,83,172,	0,2375,5893,8707,10338,25724,30142,32769,34908,36241,38290,39027,42969,43872,44656,45700,48146,48493,51663,53282,55949,57065,60068,62137,63196,72426,
#Partially deleted in new
chr4	82818661	82891178	chr4:82818661-82891178	1	-	82819073	82891151	0	26	592,72,120,264,59,297,124,174,174,146,127,179,76,78,39,75,237,153,162,100,143,141,96,199,124,91,	0,2375,5893,8707,10338,23523,25724,30142,32769,34908,36241,38290,39027,42969,43872,44656,45700,48146,48493,51663,53282,55949,57065,60068,62137,72426,
#Partially deleted in new
chr4	82818661	82891266	chr4:82818661-82891266	1	-	82819073	82881936	0	27	592,72,120,264,59,342,124,174,174,146,127,179,76,78,39,75,237,153,162,100,143,141,96,199,124,80,179,	0,2375,5893,8707,10338,23478,25724,30142,32769,34908,36241,38290,39027,42969,43872,44656,45700,48146,48493,51663,53282,55949,57065,60068,62137,63196,72426,
#Partially deleted in new
chr4	82818661	82891214	chr4:82818661-82891214	1	-	82819073	82881936	0	26	592,72,120,264,59,124,174,174,146,127,179,76,78,39,75,237,153,162,100,143,141,96,199,124,80,127,	0,2375,5893,8707,10338,25724,30142,32769,34908,36241,38290,39027,42969,43872,44656,45700,48146,48493,51663,53282,55949,57065,60068,62137,63196,72426,
#Partially deleted in new
chr4	82818671	82881940	chr4:82818671-82881940	1	-	82819073	82881936	0	23	582,72,120,264,59,124,174,174,146,127,179,76,75,237,153,162,100,143,141,96,199,124,83,	0,2365,5883,8697,10328,25714,30132,32759,34898,36231,38280,39017,44646,45690,48136,48483,51653,53272,55939,57055,60058,62127,63186,
#Partially deleted in new
chr4	82818671	82881937	chr4:82818671-82881937	1	-	82819073	82881936	789624	27	582,72,120,264,59,342,124,93,174,174,146,127,179,76,78,39,75,237,153,162,100,143,141,96,199,124,80,	0,2365,5883,8697,10328,23468,25714,26529,30132,32759,34898,36231,38280,39017,42959,43862,44646,45690,48136,48483,51653,53272,55939,57055,60058,62127,63186,
#Partially deleted in new
chr4	82819010	82900538	chr4:82819010-82900538	3	-	82819073	82881936	0	29	243,72,120,264,59,342,124,174,174,146,127,179,76,78,39,75,237,153,162,100,143,141,96,199,124,80,25,147,205,	0,2026,5544,8358,9989,23129,25375,29793,32420,34559,35892,37941,38678,42620,43523,44307,45351,47797,48144,51314,52933,55600,56716,59719,61788,62847,80702,81066,81323,
#Partially deleted in new
chr4	82819010	82891203	chr4:82819010-82891203	1	-	82819073	82881936	0	27	243,72,120,264,59,297,124,174,174,146,127,179,76,78,39,75,237,153,162,100,143,141,96,199,124,83,116,	0,2026,5544,8358,9989,23174,25375,29793,32420,34559,35892,37941,38678,42620,43523,44307,45351,47797,48144,51314,52933,55600,56716,59719,61788,62847,72077,
#Partially deleted in new
chr4	82819020	82827612	chr4:82819020-82827612	0	-	82819073	82827612	789624	3	233,120,244,	0,5534,8348,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr4	82819021	82871950	chr4:82819021-82871950	1	-	82819073	82871465	789624	20	232,72,120,264,59,297,124,93,174,174,146,127,179,76,75,237,153,162,100,583,	0,2015,5533,8347,9978,23163,25364,26179,29782,32409,34548,35881,37930,38667,44296,45340,47786,48133,51303,52346,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	82819037	82821451	chr4:82819037-82821451	0	-	82819037	82819037	8553170	2	216,415,	0,1999,
#Partially deleted in new
chr4	82819043	82891148	chr4:82819043-82891148	1	-	82819073	82881936	0	25	210,72,120,264,59,297,124,174,174,146,127,179,76,75,237,153,162,100,143,141,96,199,124,83,61,	0,1993,5511,8325,9956,23141,25342,29760,32387,34526,35859,37908,38645,44274,45318,47764,48111,51281,52900,55567,56683,59686,61755,62814,72044,
#Partially deleted in new
chr4	82824597	82848843	chr4:82824597-82848843	0	-	82824597	82848843	789624	6	77,264,59,124,93,40,	0,2771,4402,19788,20603,24206,
#Partially deleted in new
chr4	82827499	82831361	chr4:82827499-82831361	0	-	82827499	82827499	8553170	3	133,59,425,	0,1500,3437,
#Partially deleted in new
chr4	82827547	82842824	chr4:82827547-82842824	0	-	82827547	82827547	8553170	3	85,59,685,	0,1452,14592,
#Partially deleted in new
chr4	82827555	82829413	chr4:82827555-82829413	0	-	82827555	82827555	8553170	2	77,414,	0,1444,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr4	82843684	82891153	chr4:82843684-82891153	1	-	82844377	82881936	789624	21	825,174,174,146,127,179,76,78,39,75,237,153,162,100,143,141,96,199,124,83,66,	0,5119,7746,9885,11218,13267,14004,17946,18849,19633,20677,23123,23470,26640,28259,30926,32042,35045,37114,38173,47403,
#Partially deleted in new
chr4	82848825	82866931	chr4:82848825-82866931	0	-	82848825	82866931	789624	10	152,174,146,127,179,76,39,75,237,124,	0,2605,4744,6077,8126,8863,13708,14492,15536,17982,
#Partially deleted in new
chr4	82851513	82864455	chr4:82851513-82864455	0	-	82851513	82864455	789624	7	91,68,127,179,76,75,94,	0,2056,3389,5438,6175,11804,12848,
#Partially deleted in new
chr4	82853630	82864598	chr4:82853630-82864598	0	-	82853630	82864598	789624	7	85,127,179,76,78,75,237,	0,1272,3321,4058,8000,9687,10731,
#Partially deleted in new
chr4	82854905	82857998	chr4:82854905-82857998	0	-	82854905	82854905	8553170	3	124,179,310,	0,2046,2783,
#Partially deleted in new
chr4	82854949	82861846	chr4:82854949-82861846	0	-	82854949	82854949	8553170	4	80,179,76,216,	0,2002,2739,6681,
#Partially deleted in new
chr4	82863210	82891184	chr4:82863210-82891184	0	-	82863210	82863210	8553170	12	182,237,153,162,100,143,141,96,199,124,83,97,	0,1151,3597,3944,7114,8733,11400,12516,15519,17588,18647,27877,
#Partially deleted in new
chr4	82871932	82891120	chr4:82871932-82891120	0	-	82871932	82891120	789624	6	154,141,96,199,83,33,	0,2678,3794,6797,9925,19155,
#Partially deleted in new
chr4	82874697	82891205	chr4:82874697-82891205	0	-	82875817	82881936	789624	6	54,96,71,124,83,118,	0,1029,4160,6101,7160,16390,
#Partially deleted in new
chr4	82875726	82891095	chr4:82875726-82891095	0	-	82875726	82881936	789624	5	96,199,124,83,345,	0,3003,5072,6131,15024,
#Partially deleted in new
chr4	82875730	82891018	chr4:82875730-82891018	0	-	82875730	82881936	789624	5	92,199,124,83,324,	0,2999,5068,6127,14964,
#Partially deleted in new
chr4	82875771	82891178	chr4:82875771-82891178	0	-	82875771	82875771	8553170	5	70,199,124,80,91,	0,2958,5027,6086,15316,
#Partially deleted in new
chr4	82875784	82891240	chr4:82875784-82891240	0	-	82878914	82881936	789624	5	38,189,124,83,153,	0,2945,5014,6073,15303,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	82877488	82891178	chr4:82877488-82891178	0	-	82877488	82877488	8553170	5	313,71,124,83,91,	0,1369,3310,4369,13599,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	82877556	82891133	chr4:82877556-82891133	0	-	82877556	82877556	8553170	5	474,199,124,83,46,	0,1173,3242,4301,13531,
#Partially deleted in new
chr4	82878775	82891261	chr4:82878775-82891261	0	-	82878775	82878775	8553170	5	153,50,124,83,174,	0,1886,2023,3082,12312,
#Partially deleted in new
chr4	82878887	82901166	chr4:82878887-82901166	0	-	82878887	82881936	789624	6	41,124,83,74,147,84,	0,1911,2970,19101,21189,22195,
#Partially deleted in new
chr4	82880803	82891102	chr4:82880803-82891102	0	-	82880803	82881936	789624	3	119,83,367,	0,1054,9932,
#Partially deleted in new
chr4	82880806	82900538	chr4:82880806-82900538	0	-	82880806	82881936	789624	4	116,83,147,205,	0,1051,19270,19527,
#Partially deleted in new
chr4	82881856	82900569	chr4:82881856-82900569	0	-	82881856	82881936	789624	4	84,74,147,236,	0,16132,18220,18477,
#Partially deleted in new
chr4	82881901	82900569	chr4:82881901-82900569	0	-	82881901	82881936	789624	4	39,74,147,198,	0,16087,18175,18470,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	82893008	82900960	chr4:82893008-82900960	1	-	82893008	82893008	789624	5	1839,83,74,147,627,	0,2683,4980,7068,7325,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	82893544	82900508	chr4:82893544-82900508	1	-	82893544	82893544	8553170	4	2230,25,147,175,	0,6168,6532,6789,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	82894249	82900559	chr4:82894249-82900559	0	-	82894249	82894249	8553170	3	598,147,226,	0,5827,6084,
#Partially deleted in new
chr4	82895690	82900569	chr4:82895690-82900569	2	-	82895690	82895690	8553170	5	84,74,25,147,236,	0,2298,4022,4386,4643,
#Partially deleted in new
chr4	82897762	82900569	chr4:82897762-82900569	0	-	82897762	82897762	8553170	3	300,147,236,	0,2314,2571,
#Partially deleted in new
chr4	82897792	82900502	chr4:82897792-82900502	0	-	82897792	82897792	8553170	4	270,25,147,131,	0,1920,2284,2579,
#Partially deleted in new
chr4	82897855	82900569	chr4:82897855-82900569	0	-	82897855	82897855	8553170	3	207,147,198,	0,2221,2516,
#Partially deleted in new
chr4	82897922	82900571	chr4:82897922-82900571	0	-	82897922	82897922	8553170	4	140,25,147,238,	0,1790,2154,2411,
#Deleted in new
chr4	82899544	82900559	chr4:82899544-82900559	0	-	82899544	82899544	8553170	3	193,147,226,	0,532,789,
#Deleted in new
chr4	82899692	82900566	chr4:82899692-82900566	0	-	82899692	82899692	8553170	2	45,490,	0,384,
#Deleted in new
chr4	82899822	82900569	chr4:82899822-82900569	0	-	82899822	82899822	8553170	2	401,236,	0,511,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	82900683	82904824	chr4:82900683-82904824	0	+	82900802	82901088	789624	4	199,98,167,89,	0,392,2723,4052,
#Partially deleted in new
chr4	82900702	82907915	chr4:82900702-82907915	0	+	82900802	82906346	789624	4	180,206,304,131,	0,4033,5621,7082,
#Partially deleted in new
chr4	82900751	82919969	chr4:82900751-82919969	3	+	82900802	82918924	789624	5	131,196,304,151,3026,	0,3984,5572,7033,16192,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	82900765	82907791	chr4:82900765-82907791	0	+	82900802	82905904	789624	5	117,206,66,304,7,	0,3970,5095,5558,7019,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	82900768	82919460	chr4:82900768-82919460	0	+	82900802	82905893	789624	6	114,196,66,304,151,2517,	0,3967,5092,5555,7016,16175,
#Partially deleted in new
chr4	82909972	82928198	chr4:82909972-82928198	0	-	82909972	82909972	8553170	4	295,211,161,143,	0,3258,14717,18083,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	82924602	83010829	chr4:82924602-83010829	3	-	82928101	82984844	0	13	3701,203,138,103,72,92,198,74,217,143,124,716,346,	0,6340,11378,11676,12624,13810,14936,15286,21655,45724,54280,59558,85881,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	82925547	83010821	chr4:82925547-83010821	0	-	82970421	82984844	789624	13	2756,203,138,103,72,92,198,74,217,139,124,53,338,	0,5395,10433,10731,11679,12865,13991,14341,20710,44779,53335,59276,84936,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	82925714	83010731	chr4:82925714-83010731	1	-	82928101	82984844	0	13	2589,203,138,103,72,92,198,74,217,143,124,53,248,	0,5228,10266,10564,11512,12698,13824,14174,20543,44612,53168,59109,84769,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	82925714	83010823	chr4:82925714-83010823	1	-	82928101	82984844	0	13	2589,203,138,103,72,92,198,74,217,143,124,53,77,	0,5228,10266,10564,11512,12698,13824,14174,20543,44612,53168,59109,85032,
#Partially deleted in new
chr4	82927559	83012887	chr4:82927559-83012887	1	-	82928101	82984844	0	13	744,203,138,103,72,92,198,74,217,143,124,53,96,	0,3383,8421,8719,9667,10853,11979,12329,18698,42767,51323,57264,85232,
#Partially deleted in new
chr4	82927585	83010709	chr4:82927585-83010709	1	-	82928101	82984844	0	11	718,203,138,103,72,92,198,74,217,716,226,	0,3357,8395,8693,9641,10827,11953,12303,18672,56575,82898,
#Partially deleted in new
chr4	82927585	83010710	chr4:82927585-83010710	0	-	82970421	82984844	0	11	718,203,138,103,72,92,198,74,143,716,227,	0,3357,8395,8693,9641,10827,11953,12303,42741,56575,82898,
#Partially deleted in new
chr4	82927776	83012926	chr4:82927776-83012926	1	-	82928101	82984844	0	13	527,203,138,103,72,92,198,74,217,143,124,716,135,	0,3166,8204,8502,9450,10636,11762,12112,18481,42550,51106,56384,85015,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	82944737	82944845	chr4:82944737-82944845	3	-	82944737	82944737	8553170	1	108,	0,
#Partially deleted in new
chr4	82984161	83012911	chr4:82984161-83012911	0	-	82984161	82984161	8553170	3	556,53,120,	0,662,28630,
#Deleted in new
chr4	83003411	83003517	chr4:83003411-83003517	3	+	83003411	83003411	8553170	1	106,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	83034446	83075789	chr4:83034446-83075789	1	+	83035224	83075353	0	9	852,80,152,104,154,151,171,116,493,	0,11179,14719,15434,22479,22811,28629,31991,40850,
#Partially deleted in new
chr4	83035089	83075818	chr4:83035089-83075818	3	+	83035224	83075430	0	10	209,80,152,104,154,151,171,116,85,522,	0,10536,14076,14791,21836,22168,27986,31348,33348,40207,
#Partially deleted in new
chr4	83035170	83049515	chr4:83035170-83049515	0	+	83035170	83035170	8553170	3	128,80,350,	0,10455,13995,
#Partially deleted in new
chr4	83035172	83075371	chr4:83035172-83075371	0	+	83035224	83075371	789624	7	126,154,151,171,116,85,75,	0,21753,22085,27903,31265,33265,40124,
#Partially deleted in new
chr4	83035173	83049984	chr4:83035173-83049984	0	+	83035173	83035173	8553170	3	125,152,104,	0,13992,14707,
#Partially deleted in new
chr4	83035198	83057062	chr4:83035198-83057062	0	+	83035198	83035198	8553170	5	100,80,152,109,137,	0,10427,13967,14682,21727,
#Partially deleted in new
chr4	83035200	83049959	chr4:83035200-83049959	0	+	83035224	83045678	789624	4	98,109,152,79,	0,10396,13965,14680,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	83035206	83075797	chr4:83035206-83075797	1	+	83035224	83075430	789624	11	92,80,152,104,154,151,171,96,116,85,501,	0,10419,13959,14674,21719,22051,27869,29853,31231,33231,40090,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	83035224	83075756	chr4:83035224-83075756	1	+	83035224	83075324	789624	11	74,80,152,104,154,151,171,116,85,148,460,	0,10401,13941,14656,21701,22033,27851,31213,33213,37981,40072,
#Partially deleted in new
chr4	83035429	83049307	chr4:83035429-83049307	0	+	83035429	83035429	8553170	3	602,80,142,	0,10196,13736,
#Partially deleted in new
chr4	83062974	83068506	chr4:83062974-83068506	0	+	83062974	83062974	8553170	3	272,116,69,	0,3463,5463,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	83090047	83114802	chr4:83090047-83114802	1	-	83094686	83107921	789624	5	924,114,125,147,137,	0,4630,14848,17756,24618,
#Partially deleted in new
chr4	83090687	83109843	chr4:83090687-83109843	1	-	83094686	83107921	789624	5	284,114,125,147,116,	0,3990,14208,17116,19040,
#Partially deleted in new
chr4	83090792	83114736	chr4:83090792-83114736	1	-	83094686	83104967	789624	4	179,114,125,71,	0,3885,14103,23873,
#Partially deleted in new
chr4	83090792	83114736	chr4:83090792-83114736	0	-	83090792	83090792	8553170	3	179,114,71,	0,3885,23873,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	83090805	83137075	chr4:83090805-83137075	3	-	83094686	83107921	789624	8	166,114,125,147,168,88,100,117,	0,3872,14090,16998,24459,27078,43729,46153,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	83092860	83114715	chr4:83092860-83114715	1	-	83094686	83107921	789624	4	1931,125,147,50,	0,12035,14943,21805,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	83233511	83247213	chr4:83233511-83247213	3	-	83233511	83233511	8553170	3	146,94,154,	0,5010,13548,
#Partially deleted in new
chr4	83237302	83237444	chr4:83237302-83237444	7	+	83237302	83237302	16724991	1	142,	0,
#Deleted in new
chr4	83247178	83248206	chr4:83247178-83248206	7	+	83247178	83247178	16724991	1	1028,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	83261535	83284795	chr4:83261535-83284795	0	-	83267760	83284764	789624	7	389,67,189,86,122,167,284,	0,1053,6050,10551,11960,17412,22976,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	83263823	83279058	chr4:83263823-83279058	0	-	83267172	83279058	789624	7	540,119,189,134,86,122,111,	0,3266,3762,6036,8263,9672,15124,
#Partially deleted in new
chr4	83263823	83284914	chr4:83263823-83284914	3	-	83264198	83284764	789624	7	540,189,134,86,122,167,403,	0,3762,6036,8263,9672,15124,20688,
#Partially deleted in new
chr4	83263825	83284914	chr4:83263825-83284914	1	-	83264198	83284914	789624	7	538,189,134,86,122,167,403,	0,3760,6034,8261,9670,15122,20686,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	83266696	83284765	chr4:83266696-83284765	1	-	83267172	83284764	789624	7	512,189,134,86,122,167,254,	0,889,3163,5390,6799,12251,17815,
#Partially deleted in new
chr4	83273542	83281596	chr4:83273542-83281596	0	-	83273542	83273542	8553170	3	75,167,165,	0,5405,7889,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	83292460	83334882	chr4:83292460-83334882	1	-	83295343	83334782	0	12	3043,147,119,115,107,94,48,169,174,126,146,327,	0,8499,9689,13742,16384,16941,17570,18261,20653,26883,29758,42095,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	83292460	83335153	chr4:83292460-83335153	3	-	83295343	83334782	0	13	3043,147,119,115,107,94,48,169,174,126,146,258,106,	0,8499,9689,13742,16384,16941,17570,18261,20653,26883,29758,42095,42587,
#Partially deleted in new
chr4	83295319	83335153	chr4:83295319-83335153	0	-	83310070	83334782	789624	12	184,147,119,115,107,94,48,174,126,146,258,106,	0,5640,6830,10883,13525,14082,14711,17794,24024,26899,39236,39728,
#Partially deleted in new
chr4	83295319	83335153	chr4:83295319-83335153	0	-	83310070	83334782	789624	11	184,147,119,115,107,94,48,126,146,258,106,	0,5640,6830,10883,13525,14082,14711,24024,26899,39236,39728,
#Partially deleted in new
chr4	83295319	83335153	chr4:83295319-83335153	0	-	83302216	83334782	0	12	184,147,119,107,94,48,169,174,126,146,258,106,	0,5640,6830,13525,14082,14711,15402,17794,24024,26899,39236,39728,
#Partially deleted in new
chr4	83295319	83335153	chr4:83295319-83335153	1	-	83295343	83334782	0	11	184,147,119,94,48,169,174,126,146,258,106,	0,5640,6830,14082,14711,15402,17794,24024,26899,39236,39728,
#Partially deleted in new
chr4	83295343	83334782	chr4:83295343-83334782	1	-	83295343	83334782	0	11	160,147,119,115,107,94,48,169,126,146,227,	0,5616,6806,10859,13501,14058,14687,15378,24000,26875,39212,
#Partially deleted in new
chr4	83369415	83369523	chr4:83369415-83369523	7	-	83369415	83369415	16724991	1	108,	0,
#Partially deleted in new
chr4	83377362	83378076	chr4:83377362-83378076	7	-	83377362	83377362	16724991	2	105,534,	0,180,
#Partially deleted in new
chr4	83407342	83455856	chr4:83407342-83455856	3	-	83407452	83455693	789624	18	218,135,114,174,99,158,223,105,142,240,146,99,98,73,201,179,715,460,	0,9388,10750,14220,18651,20220,22181,24321,24783,29515,32520,33962,36174,38671,39492,41440,45888,48054,
#Partially deleted in new
chr4	83407342	83455804	chr4:83407342-83455804	0	-	83441398	83455693	789624	17	218,135,114,174,99,158,223,105,142,240,146,99,73,201,179,715,408,	0,9388,10750,14220,18651,20220,22181,24321,24783,29515,32520,33962,38671,39492,41440,45888,48054,
#Partially deleted in new
chr4	83407366	83427726	chr4:83407366-83427726	0	-	83407366	83407366	8553170	4	194,174,99,164,	0,14196,18627,20196,
#Partially deleted in new
chr4	83407372	83455823	chr4:83407372-83455823	1	-	83407452	83455693	789624	17	188,135,114,174,99,158,223,105,142,240,146,99,98,73,179,715,427,	0,9358,10720,14190,18621,20190,22151,24291,24753,29485,32490,33932,36144,38641,41410,45858,48024,
#Partially deleted in new
chr4	83453719	83455855	chr4:83453719-83455855	0	-	83453719	83453719	8553170	2	226,348,	0,1788,
#Partially deleted in new
chr4	83453756	83455823	chr4:83453756-83455823	0	-	83453756	83453756	8553170	2	189,555,	0,1512,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	83455931	83459144	chr4:83455931-83459144	0	+	83455931	83455931	8553170	2	246,2236,	0,977,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	83455964	83462298	chr4:83455964-83462298	3	+	83456077	83461197	0	6	213,50,84,58,60,1178,	0,944,2381,3775,5008,5156,
#Partially deleted in new
chr4	83455982	83461423	chr4:83455982-83461423	1	+	83456077	83461197	789624	5	195,50,58,60,303,	0,926,3757,4990,5138,
#Partially deleted in new
chr4	83456054	83461237	chr4:83456054-83461237	1	+	83456077	83461029	789624	4	123,50,60,117,	0,854,4918,5066,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	83456082	83467504	chr4:83456082-83467504	0	+	83456082	83461197	789624	6	95,50,58,60,113,479,	0,826,3657,4890,5038,10943,
#Partially deleted in new
chr4	83456089	83461328	chr4:83456089-83461328	0	+	83456089	83461029	789624	5	88,50,84,60,208,	0,819,2256,4883,5031,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	83459516	83485181	chr4:83459516-83485181	3	-	83462468	83485072	0	9	3386,115,85,120,194,67,37,91,196,	0,3977,7937,9515,10686,12705,17126,22637,25469,
#Partially deleted in new
chr4	83459619	83461236	chr4:83459619-83461236	0	+	83459619	83459619	8553170	2	178,264,	0,1353,
#Partially deleted in new
chr4	83459671	83461235	chr4:83459671-83461235	0	+	83459671	83459671	8553170	3	126,60,115,	0,1301,1449,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	83460944	83485103	chr4:83460944-83485103	0	-	83470386	83485072	789624	8	1958,115,85,120,194,37,91,118,	0,2549,6509,8087,9258,15698,21209,24041,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	83461192	83469735	chr4:83461192-83469735	0	+	83461192	83461192	8553170	2	41,401,	0,8142,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	83462008	83485555	chr4:83462008-83485555	1	-	83462468	83482184	789624	9	894,115,85,120,194,67,37,91,266,	0,1485,5445,7023,8194,10213,14634,20145,23281,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	83462074	83469901	chr4:83462074-83469901	0	-	83462074	83462074	8553170	4	828,115,85,870,	0,1419,5379,6957,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	83463722	83470333	chr4:83463722-83470333	0	-	83463780	83470333	789624	5	212,107,85,120,131,	0,3116,3731,5309,6480,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	83467453	83523348	chr4:83467453-83523348	0	-	83467453	83523161	789624	7	85,120,194,67,37,91,253,	0,1578,2749,4768,9189,14700,55642,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	83470202	83485103	chr4:83470202-83485103	0	-	83484139	83485072	789624	6	194,67,37,91,175,118,	0,2019,6440,11951,13789,14783,
#Partially deleted in new
chr4	83470273	83485100	chr4:83470273-83485100	0	-	83470273	83485072	789624	5	123,67,37,91,277,	0,1948,6369,11880,14550,
#Deleted in new
chr4	83477523	83478424	chr4:83477523-83478424	7	+	83477523	83477523	16724991	1	901,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	83478807	83485065	chr4:83478807-83485065	1	-	83480146	83482180	789624	3	1561,91,80,	0,3346,6178,
#Deleted in new
chr4	83502698	83503034	chr4:83502698-83503034	7	+	83502698	83502698	16724991	1	336,	0,
#Partially deleted in new
chr4	83535913	83544613	chr4:83535913-83544613	0	+	83535913	83535913	8553170	3	104,260,78,	0,590,8622,
#Partially deleted in new
chr4	83535913	83605872	chr4:83535913-83605872	3	+	83536622	83604767	789624	13	104,260,67,271,75,90,94,116,56,86,129,80,1205,	0,590,8622,45648,51341,52296,54285,58931,60944,61516,62137,62730,68754,
#Partially deleted in new
chr4	83535974	83544613	chr4:83535974-83544613	0	+	83535974	83535974	8553170	3	232,260,78,	0,529,8561,
#Partially deleted in new
chr4	83536107	83605875	chr4:83536107-83605875	1	+	83536622	83604767	789624	13	99,260,67,271,75,90,94,116,56,86,129,80,1208,	0,396,8428,45454,51147,52102,54091,58737,60750,61322,61943,62536,68560,
#Partially deleted in new
chr4	83536306	83544603	chr4:83536306-83544603	0	+	83536306	83536306	8553170	3	49,260,68,	0,197,8229,
#Partially deleted in new
chr4	83536410	83605875	chr4:83536410-83605875	1	+	83536622	83604767	789624	12	353,67,271,75,90,94,116,56,86,129,80,1208,	0,8125,45151,50844,51799,53788,58434,60447,61019,61640,62233,68257,
#Partially deleted in new
chr4	83588257	83595335	chr4:83588257-83595335	0	+	83588257	83588257	8553170	3	42,94,491,	0,1941,6587,
#Partially deleted in new
chr4	83598528	83605139	chr4:83598528-83605139	0	+	83598528	83598528	8553170	2	195,472,	0,6139,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	83636195	83636290	chr4:83636195-83636290	3	-	83636195	83636195	8553170	1	95,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	83668509	83731755	chr4:83668509-83731755	3	-	83668509	83668509	8553170	4	297,160,116,218,	0,5579,6192,63028,
#Partially deleted in new
chr4	83796435	84284327	chr4:83796435-84284327	3	-	83796435	83796435	8553170	6	181,157,108,65,106,122,	0,15053,139187,215619,446675,487770,
#Partially deleted in new
chr4	84147732	84149288	chr4:84147732-84149288	0	-	84147732	84147732	8553170	2	398,70,	0,1486,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	84233656	84233763	chr4:84233656-84233763	3	+	84233656	84233656	8553170	1	107,	0,
#Deleted in new
chr4	84244002	84245488	chr4:84244002-84245488	7	+	84244002	84244002	16724991	1	1486,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	84371392	84380189	chr4:84371392-84380189	3	-	84371392	84371392	8553170	3	366,68,268,	0,3468,8529,
#Deleted in new
chr4	84491986	84498450	chr4:84491986-84498450	3	-	84493288	84498228	789624	3	1563,173,892,	0,3685,5572,
#Deleted in new
chr4	84491986	84496950	chr4:84491986-84496950	1	-	84493288	84495692	789624	3	1563,173,458,	0,3685,4506,
#Deleted in new
chr4	84544303	84544519	chr4:84544303-84544519	7	-	84544303	84544303	16724991	1	216,	0,
#Partially deleted in new
chr4	84582978	84651338	chr4:84582978-84651338	3	+	84583401	84648686	789624	13	540,128,97,98,140,59,83,88,69,153,120,104,2782,	0,21264,26450,34585,36415,48840,50878,52285,55945,57859,60045,62243,65578,
#Partially deleted in new
chr4	84583268	84619511	chr4:84583268-84619511	0	+	84583401	84617595	789624	4	250,97,98,118,	0,26160,34295,36125,
#Partially deleted in new
chr4	84669609	84966391	chr4:84669609-84966391	3	-	84672867	84860591	0	68	3382,198,112,324,97,183,180,159,155,148,213,92,154,107,118,120,55,81,86,121,149,164,169,51,228,78,158,183,110,230,161,100,234,180,135,236,218,121,95,162,74,153,191,112,161,232,182,219,101,232,113,215,178,84,458,194,102,468,167,187,193,162,110,124,211,100,94,183,	0,7589,8558,9309,12764,14333,18476,20896,22021,23275,26360,27122,32743,34728,35784,39299,39683,43549,45688,47286,48812,51799,54816,57251,63772,65433,66560,67574,69400,70577,72151,74090,81873,84087,85656,87316,96200,96642,103225,105210,105455,108893,110498,113353,116369,117872,120116,124909,125269,126911,128386,132040,133680,138724,140277,147782,150475,151474,157205,159394,161803,167319,171544,180292,190802,227301,262660,296599,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	84672290	84682948	chr4:84672290-84682948	0	-	84672290	84672290	8553170	5	701,198,112,324,575,	0,4908,5877,6628,10083,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	84687724	84688000	chr4:84687724-84688000	3	-	84687724	84687724	8553170	1	276,	0,
#Partially deleted in new
chr4	84691725	84733462	chr4:84691725-84733462	0	-	84691725	84733462	789624	16	60,148,213,92,154,107,118,120,55,81,86,121,149,164,169,81,	0,1159,4244,5006,10627,12612,13668,17183,17567,21433,23572,25170,26696,29683,32700,41656,
#Partially deleted in new
chr4	84735105	84739330	chr4:84735105-84739330	0	-	84735105	84735105	8553170	4	15,158,183,321,	0,1064,2078,3904,
#Partially deleted in new
chr4	84751247	84755399	chr4:84751247-84755399	0	-	84751247	84751247	8553170	3	469,180,134,	0,2449,4018,
#Partially deleted in new
chr4	84801781	84810107	chr4:84801781-84810107	0	-	84801781	84801781	8553170	3	83,178,221,	0,1508,8105,
#Partially deleted in new
chr4	84801789	84804174	chr4:84801789-84804174	0	-	84801789	84801789	8553170	3	75,178,292,	0,1500,2093,
#Partially deleted in new
chr4	84803257	84810391	chr4:84803257-84810391	3	+	84803257	84803257	8553170	2	152,341,	0,6793,
#Partially deleted in new
chr4	84808865	84896941	chr4:84808865-84896941	0	-	84808865	84808865	8553170	12	1479,194,102,468,167,187,193,162,110,124,211,31,	0,8526,11219,12218,17949,20138,22547,28063,32288,41036,51546,88045,
#Partially deleted in new
chr4	84841191	84850015	chr4:84841191-84850015	0	-	84841191	84850015	789624	3	72,54,114,	0,3264,8710,
#Partially deleted in new
chr4	84849672	84860563	chr4:84849672-84860563	0	-	84849672	84849672	8553170	2	353,152,	0,10739,
#Partially deleted in new
chr4	84860411	84966350	chr4:84860411-84966350	0	-	84860411	84860591	789624	3	211,100,142,	0,36499,105797,
#Partially deleted in new
chr4	84860563	84966391	chr4:84860563-84966391	0	-	84860563	84860591	789624	4	59,89,94,183,	0,18842,71706,105645,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	84886385	84886486	chr4:84886385-84886486	3	-	84886385	84886385	8553170	1	101,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	84967004	85011277	chr4:84967004-85011277	3	+	84967004	84967004	8553170	6	123,152,75,98,95,5271,	0,2720,33686,37225,38469,39002,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	85100495	85100823	chr4:85100495-85100823	3	+	85100495	85100495	8553170	1	328,	0,
#Deleted in new
chr4	85246156	85246912	chr4:85246156-85246912	7	+	85246156	85246156	16724991	1	756,	0,
#Partially deleted in new
chr4	85475113	86002670	chr4:85475113-86002670	3	+	85570541	86000722	789624	10	446,200,88,123,208,133,74,122,1075,2192,	0,95408,246771,448534,466952,496922,499774,502456,519469,525365,
#Partially deleted in new
chr4	85475237	85972367	chr4:85475237-85972367	1	+	85570541	85972177	789624	6	322,200,88,123,208,332,	0,95284,246647,448410,466828,496798,
#Partially deleted in new
chr4	85475442	85723732	chr4:85475442-85723732	0	+	85475442	85475442	8553170	4	117,200,88,452,	0,95079,246442,247838,
#Partially deleted in new
chr4	85475485	85570932	chr4:85475485-85570932	0	+	85475485	85475485	8553170	2	74,411,	0,95036,
#Partially deleted in new
chr4	85570592	85722386	chr4:85570592-85722386	0	+	85570592	85570592	8553170	2	129,502,	0,151292,
#Partially deleted in new
chr4	85604152	85942205	chr4:85604152-85942205	0	+	85923664	85942205	789624	5	151,65,88,123,140,	0,82450,117732,319495,337913,
#Deleted in new
chr4	85722467	85722533	chr4:85722467-85722533	3	+	85722467	85722467	5263520	1	66,	0,
#Partially deleted in new
chr4	85778705	86001223	chr4:85778705-86001223	1	+	85923664	86000722	789624	8	260,123,208,133,74,122,1075,745,	0,144942,163360,193330,196182,198864,215877,221773,
#Partially deleted in new
chr4	85827744	85972168	chr4:85827744-85972168	0	+	85827962	85972168	789624	3	231,208,133,	0,114321,144291,
#Partially deleted in new
chr4	85827892	86000596	chr4:85827892-86000596	0	+	85827962	86000596	789624	8	83,123,208,133,74,122,1075,118,	0,95755,114173,144143,146995,149677,166690,172586,
#Partially deleted in new
chr4	85923733	85975766	chr4:85923733-85975766	0	+	85923733	85923733	8553170	5	37,208,133,74,273,	0,18332,48302,51154,51760,
#Partially deleted in new
chr4	85924696	85942450	chr4:85924696-85942450	0	+	85924696	85924696	8553170	2	44,385,	0,17369,
#Partially deleted in new
chr4	85930272	86002668	chr4:85930272-86002668	1	+	85930930	86000722	789624	7	770,208,133,74,122,1075,2190,	0,11793,41763,44615,47297,64310,70206,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	85990006	86360060	chr4:85990006-86360060	1	-	85992132	86194401	789624	15	2157,139,78,64,125,183,72,166,139,59,130,170,72,115,403,	0,27225,39190,41361,74259,77766,108517,111045,111887,113179,117216,169291,204329,364523,369651,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	85990137	86360051	chr4:85990137-86360051	1	-	85992132	86159419	789624	15	2026,139,78,64,125,183,72,166,139,59,130,170,99,115,394,	0,27094,39059,41230,74128,77635,108386,110914,111756,113048,117085,169160,204171,364392,369520,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	85991107	86003704	chr4:85991107-86003704	0	-	85991107	85991107	8553170	3	1056,41,134,	0,10329,12463,
#Partially deleted in new
chr4	85999847	86360053	chr4:85999847-86360053	1	-	86001212	86194401	789624	15	1630,139,78,64,125,183,72,166,139,59,130,170,72,115,396,	0,17384,29349,31520,64418,67925,98676,101204,102046,103338,107375,159450,194488,354682,359810,
#Partially deleted in new
chr4	86010394	86360222	chr4:86010394-86360222	1	-	86017227	86159419	0	14	6976,78,64,125,183,72,166,139,59,130,170,99,115,565,	0,18802,20973,53871,57378,88129,90657,91499,92791,96828,148903,183914,344135,349263,
#Partially deleted in new
chr4	86010430	86360059	chr4:86010430-86360059	1	-	86017358	86159419	789624	14	6945,78,64,125,183,72,166,139,59,130,170,99,115,402,	0,18766,20937,53835,57342,78775,90621,91463,92755,96792,148867,183878,344099,349227,
#Partially deleted in new
chr4	86010430	86360053	chr4:86010430-86360053	0	-	86159415	86194401	789624	14	6945,78,64,125,183,72,166,139,59,130,170,89,115,396,	0,18766,20937,53835,57342,88093,90621,91463,92755,96792,148867,183888,344099,349227,
#Partially deleted in new
chr4	86010452	86360051	chr4:86010452-86360051	1	-	86011324	86159419	789624	15	879,139,78,64,125,183,72,166,139,59,130,170,99,115,394,	0,6779,18744,20915,53813,57320,78753,90599,91441,92733,96770,148845,183856,344077,349205,
#Partially deleted in new
chr4	86010607	86358527	chr4:86010607-86358527	1	-	86017227	86159419	0	14	6763,78,64,125,183,72,166,139,59,130,170,99,115,320,	0,18589,20760,53658,57165,87916,90444,91286,92578,96615,148690,183701,343922,347600,
#Partially deleted in new
chr4	86012321	86360064	chr4:86012321-86360064	0	-	86159415	86194401	789624	14	5049,78,64,125,183,72,166,139,59,130,170,89,115,407,	0,16875,19046,51944,55451,86202,88730,89572,90864,94901,146976,181997,342208,347336,
#Partially deleted in new
chr4	86012477	86358586	chr4:86012477-86358586	1	-	86017227	86194401	0	14	4893,78,64,125,183,72,166,139,59,130,170,72,115,506,	0,16719,18890,51788,55295,86046,88574,89416,90708,94745,146820,181858,342052,345603,
#Partially deleted in new
chr4	86012487	86360097	chr4:86012487-86360097	1	-	86017227	86194401	0	14	4883,78,64,125,183,72,166,139,59,130,170,72,115,440,	0,16709,18880,51778,55285,86036,88564,89406,90698,94735,146810,181848,342042,347170,
#Partially deleted in new
chr4	86012490	86358509	chr4:86012490-86358509	1	-	86017227	86194401	0	14	4880,78,64,125,183,72,166,139,59,130,170,72,115,302,	0,16706,18877,51775,55282,86033,88561,89403,90695,94732,146807,181845,342039,345717,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	86012490	86453174	chr4:86012490-86453174	0	-	86101966	86194401	789624	13	4880,78,64,125,183,72,166,139,130,170,72,115,145,	0,16706,18877,51775,55282,86033,88561,89403,94732,146807,181845,342039,440539,
#Partially deleted in new
chr4	86012500	86360014	chr4:86012500-86360014	0	-	86017358	86194401	0	15	108,144,78,64,125,183,72,166,139,59,130,170,72,115,357,	0,4731,16696,18867,51765,55272,86023,88551,89393,90685,94722,146797,181835,342029,347157,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	86013873	86594625	chr4:86013873-86594625	3	-	86017227	86194401	0	15	3497,78,64,125,183,72,166,139,59,130,170,72,115,152,716,	0,15323,17494,50392,53899,84650,87178,88020,89312,93349,145424,180462,340656,439156,580036,
#Partially deleted in new
chr4	86015030	86357895	chr4:86015030-86357895	1	-	86017227	86194401	0	14	2340,78,64,125,183,72,166,139,59,130,170,72,115,258,	0,14166,16337,49235,52742,83493,86021,86863,88155,92192,144267,179305,339499,342607,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	86015030	86357722	chr4:86015030-86357722	1	-	86017227	86194401	0	15	2340,78,64,125,183,72,166,139,59,130,170,72,186,115,85,	0,14166,16337,49235,52742,83493,86021,86863,88155,92192,144267,179305,306813,339499,342607,
#Partially deleted in new
chr4	86015041	86360222	chr4:86015041-86360222	1	-	86029231	86159419	789624	14	2329,91,64,125,183,72,166,139,59,130,170,99,115,565,	0,14155,16326,49224,52731,83482,86010,86852,88144,92181,144256,179267,339488,344616,
#Partially deleted in new
chr4	86015134	86360092	chr4:86015134-86360092	1	-	86017358	86194401	789624	14	2241,78,64,125,183,72,166,139,59,130,170,72,115,435,	0,14062,16233,49131,52638,74071,85917,86759,88051,92088,144163,179201,339395,344523,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr4	86015142	86453174	chr4:86015142-86453174	1	-	86017227	86194401	789624	14	2228,78,64,125,183,72,166,139,59,130,170,72,115,145,	0,14054,16225,49123,52630,74063,85909,86751,88043,92080,144155,179193,339387,437887,
#Partially deleted in new
chr4	86015160	86360083	chr4:86015160-86360083	1	-	86017227	86194401	789624	14	2210,78,64,125,183,72,166,139,59,130,170,72,115,426,	0,14036,16207,49105,52612,74045,85891,86733,88025,92062,144137,179175,339369,344497,
#Partially deleted in new
chr4	86015211	86360060	chr4:86015211-86360060	1	-	86017227	86159419	0	15	2159,78,64,125,183,72,166,139,59,130,170,99,115,105,61,	0,13985,16156,49054,52561,83312,85840,86682,87974,92011,144086,179097,339318,344446,344788,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	86015230	86360060	chr4:86015230-86360060	1	-	86017227	86159419	0	15	2140,78,64,125,183,72,166,139,59,130,170,99,174,115,403,	0,13966,16137,49035,52542,83293,85821,86663,87955,91992,144067,179078,261819,339299,344427,
#Partially deleted in new
chr4	86015268	86357791	chr4:86015268-86357791	1	-	86017358	86159419	789624	14	2107,78,64,125,183,72,166,139,59,130,170,99,115,154,	0,13928,16099,48997,52504,83255,85783,86625,87917,91954,144029,179040,339261,342369,
#Partially deleted in new
chr4	86015934	86357889	chr4:86015934-86357889	1	-	86017227	86159419	0	14	1436,78,64,125,183,72,166,139,59,130,170,99,115,252,	0,13262,15433,48331,51838,82589,85117,85959,87251,91288,143363,178374,338595,341703,
#Partially deleted in new
chr4	86015936	86360059	chr4:86015936-86360059	1	-	86017227	86159419	0	13	1434,78,64,125,183,72,166,139,59,130,170,115,402,	0,13260,15431,48329,51836,82587,85115,85957,87249,91286,143361,338593,343721,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	86015944	86594062	chr4:86015944-86594062	1	-	86017358	86194401	0	15	1431,78,64,125,183,72,166,139,59,130,170,72,115,152,153,	0,13252,15423,48321,51828,82579,85107,85949,87241,91278,143353,178391,338585,437085,577965,
#Partially deleted in new
chr4	86015951	86360059	chr4:86015951-86360059	1	-	86029231	86194401	789624	14	1419,91,64,125,183,72,166,139,59,130,170,72,115,402,	0,13245,15416,48314,51821,82572,85100,85942,87234,91271,143346,178384,338578,343706,
#Partially deleted in new
chr4	86015959	86360053	chr4:86015959-86360053	1	-	86017227	86107246	789624	13	1411,78,64,125,183,72,166,139,59,130,99,115,396,	0,13237,15408,48306,51813,82564,85092,85934,87226,91263,178349,338570,343698,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	86015961	86360059	chr4:86015961-86360059	1	-	86017358	86159419	789624	15	1414,78,64,125,183,72,166,139,59,130,170,99,174,115,402,	0,13235,15406,48304,51811,82562,85090,85932,87224,91261,143336,178347,261088,338568,343696,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	86015968	86360058	chr4:86015968-86360058	1	-	86017227	86194401	0	15	1402,78,64,125,183,72,166,139,59,130,170,72,186,115,401,	0,13228,15399,48297,51804,82555,85083,85925,87217,91254,143329,178367,305875,338561,343689,
#Partially deleted in new
chr4	86015975	86360060	chr4:86015975-86360060	1	-	86017227	86159419	0	14	1395,78,64,125,183,72,166,139,59,130,170,27,115,403,	0,13221,15392,48290,51797,82548,85076,85918,87210,91247,143322,178333,338554,343682,
#Partially deleted in new
chr4	86015978	86360043	chr4:86015978-86360043	0	-	86064354	86194401	789624	14	1397,78,64,121,183,72,166,139,59,130,170,72,115,386,	0,13218,15389,48287,51794,82545,85073,85915,87207,91244,143319,178357,338551,343679,
#Partially deleted in new
chr4	86016001	86032578	chr4:86016001-86032578	0	-	86016001	86016001	8553170	4	1369,78,64,360,	0,13195,15366,16217,
#Partially deleted in new
chr4	86016074	86384229	chr4:86016074-86384229	1	-	86017227	86159419	0	14	1296,78,64,125,183,72,166,139,59,130,170,99,115,130,	0,13122,15293,48191,51698,82449,84977,85819,87111,91148,143223,178234,338455,368025,
#Partially deleted in new
chr4	86016118	86101992	chr4:86016118-86101992	0	-	86017358	86101992	789624	7	1257,64,125,183,72,166,99,	0,15249,48147,51654,82405,84933,85775,
#Partially deleted in new
chr4	86016249	86360053	chr4:86016249-86360053	1	-	86017358	86107246	789624	13	1126,78,64,125,183,72,166,139,59,130,99,115,396,	0,12947,15118,48016,51523,82274,84802,85644,86936,90973,178059,338280,343408,
#Partially deleted in new
chr4	86016366	86359731	chr4:86016366-86359731	1	-	86029231	86194401	789624	14	1009,91,64,125,183,72,166,139,59,130,170,72,115,74,	0,12830,15001,47899,51406,82157,84685,85527,86819,90856,142931,177969,338163,343291,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	86016367	86360048	chr4:86016367-86360048	1	-	86017227	86159419	0	15	1003,78,64,125,183,72,166,139,59,130,170,99,186,115,391,	0,12829,15000,47898,51405,82156,84684,85526,86818,90855,142930,177941,305476,338162,343290,
#Partially deleted in new
chr4	86016435	86360060	chr4:86016435-86360060	1	-	86017358	86107246	789624	13	940,78,64,125,183,72,166,139,59,130,72,115,403,	0,12761,14932,47830,51337,82088,84616,85458,86750,90787,177900,338094,343222,
#Partially deleted in new
chr4	86016444	86357740	chr4:86016444-86357740	0	-	86016444	86016444	8553170	13	926,78,64,125,183,2694,139,59,130,170,72,115,103,	0,12752,14923,47821,51328,82079,85449,86741,90778,142853,177891,338085,341193,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr4	86016477	86453145	chr4:86016477-86453145	0	-	86101966	86194401	789624	14	893,78,64,125,183,72,166,139,130,170,72,115,154,116,	0,12719,14890,47788,51295,72728,84574,85416,90745,142820,177858,338052,354236,436552,
#Partially deleted in new
chr4	86016477	86360027	chr4:86016477-86360027	1	-	86017358	86159419	789624	14	898,78,64,125,183,72,166,139,59,130,170,99,115,370,	0,12719,14890,47788,51295,82046,84574,85416,86708,90745,142820,177831,338052,343180,
#Partially deleted in new
chr4	86016477	86360051	chr4:86016477-86360051	1	-	86017358	86194401	0	14	898,78,64,125,183,72,166,139,59,130,170,72,115,394,	0,12719,14890,47788,51295,82046,84574,85416,86708,90745,142820,177858,338052,343180,
#Partially deleted in new
chr4	86016477	86360014	chr4:86016477-86360014	0	-	86101966	86159419	789624	13	898,78,64,125,183,72,166,139,130,170,99,115,357,	0,12719,14890,47788,51295,82046,84574,85416,90745,142820,177831,338052,343180,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr4	86016477	86453138	chr4:86016477-86453138	0	-	86159415	86194401	789624	14	893,78,64,125,183,72,166,139,59,130,170,89,115,109,	0,12719,14890,47788,51295,72728,84574,85416,86708,90745,142820,177841,338052,436552,
#Partially deleted in new
chr4	86016479	86358874	chr4:86016479-86358874	1	-	86017227	86159419	0	14	891,78,64,125,183,72,166,139,59,130,170,99,115,794,	0,12717,14888,47786,51293,82044,84572,85414,86706,90743,142818,177829,338050,341601,
#Partially deleted in new
chr4	86016479	86370890	chr4:86016479-86370890	1	-	86017227	86102022	789624	13	891,78,64,125,183,72,166,139,130,170,72,115,177,	0,12717,14888,47786,51293,72726,84572,85414,90743,142818,177856,338050,354234,
#Partially deleted in new
chr4	86016479	86101434	chr4:86016479-86101434	0	-	86016479	86016479	8553170	6	891,78,64,125,183,2911,	0,12717,14888,47786,51293,82044,
#Partially deleted in new
chr4	86016479	86107653	chr4:86016479-86107653	0	-	86016479	86016479	8553170	9	896,78,64,125,183,72,166,139,431,	0,12717,14888,47786,51293,82044,84572,85414,90743,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	86016479	86065603	chr4:86016479-86065603	0	-	86016479	86016479	8553170	4	891,78,64,1338,	0,12717,14888,47786,
#Partially deleted in new
chr4	86016485	86360089	chr4:86016485-86360089	1	-	86017358	86159419	789624	13	890,78,64,125,183,72,166,139,59,130,170,115,432,	0,12711,14882,47780,51287,82038,84566,85408,86700,90737,142812,338044,343172,
#Partially deleted in new
chr4	86016485	86360050	chr4:86016485-86360050	1	-	86017227	86107246	789624	13	885,78,64,125,183,72,166,139,59,130,72,115,393,	0,12711,14882,47780,51287,82038,84566,85408,86700,90737,177850,338044,343172,
#Partially deleted in new
chr4	86016486	86360051	chr4:86016486-86360051	1	-	86017227	86194401	0	15	884,78,64,125,183,72,166,139,59,130,170,72,81,115,394,	0,12710,14881,47779,51286,82037,84565,85407,86699,90736,142811,177849,318589,338043,343171,
#Partially deleted in new
chr4	86016487	86358566	chr4:86016487-86358566	1	-	86017358	86194401	0	14	888,78,64,125,183,72,166,139,59,130,170,72,115,359,	0,12709,14880,47778,51285,82036,84564,85406,86698,90735,142810,177848,338042,341720,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	86016487	86453138	chr4:86016487-86453138	0	-	86159415	86194401	789624	13	883,78,64,125,183,72,139,59,130,170,89,115,109,	0,12709,14880,47778,51285,72718,85406,86698,90735,142810,177831,338042,436542,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	86016487	86360062	chr4:86016487-86360062	1	-	86017227	86194401	0	15	883,78,64,125,183,72,166,139,59,130,170,72,85,115,405,	0,12709,14880,47778,51285,82036,84564,85406,86698,90735,142810,177848,323851,338042,343170,
#Partially deleted in new
chr4	86016487	86360059	chr4:86016487-86360059	0	-	86064354	86159419	789624	14	888,78,64,121,183,72,166,139,59,130,170,99,115,402,	0,12709,14880,47778,51285,82036,84564,85406,86698,90735,142810,177821,338042,343170,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	86016487	86340450	chr4:86016487-86340450	1	-	86017358	86159419	789624	13	888,78,64,125,183,72,166,139,59,130,170,99,112,	0,12709,14880,47778,51285,82036,84564,85406,86698,90735,142810,177821,323851,
#Partially deleted in new
chr4	86016487	86360058	chr4:86016487-86360058	1	-	86017227	86359660	789624	13	883,78,64,125,183,72,166,139,59,130,170,72,401,	0,12709,14880,47778,51285,82036,84564,85406,86698,90735,142810,177848,343170,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	86016487	86360058	chr4:86016487-86360058	1	-	86029231	86194401	789624	15	883,91,64,125,183,72,166,139,59,130,170,72,186,115,401,	0,12709,14880,47778,51285,82036,84564,85406,86698,90735,142810,177848,305356,338042,343170,
#Partially deleted in new
chr4	86016487	86360053	chr4:86016487-86360053	0	-	86040966	86194401	789624	15	883,78,64,112,125,183,72,166,139,59,130,170,72,115,396,	0,12709,14880,24385,47778,51285,82036,84564,85406,86698,90735,142810,177848,338042,343170,
#Partially deleted in new
chr4	86016489	86360028	chr4:86016489-86360028	1	-	86017358	86159419	789624	15	886,78,64,125,183,72,166,139,59,130,170,99,115,58,371,	0,12707,14878,47776,51283,82034,84562,85404,86696,90733,142808,177819,338040,339972,343168,
#Partially deleted in new
chr4	86016489	86360060	chr4:86016489-86360060	1	-	86017227	86159419	789624	14	881,78,64,125,183,72,166,139,59,130,170,99,115,403,	0,12707,14878,47776,51283,72716,84562,85404,86696,90733,142808,177819,338040,343168,
#Partially deleted in new
chr4	86016489	86360060	chr4:86016489-86360060	0	-	86152628	86159419	789624	16	881,78,64,125,183,72,166,139,59,130,154,167,170,99,115,403,	0,12707,14878,47776,51283,82034,84562,85404,86696,90733,135501,135973,142808,177819,338040,343168,
#Partially deleted in new
chr4	86016489	86360053	chr4:86016489-86360053	0	-	86152168	86194401	789624	15	881,78,64,125,183,72,166,139,59,130,206,170,72,115,396,	0,12707,14878,47776,51283,82034,84562,85404,86696,90733,135501,142808,177846,338040,343168,
#Partially deleted in new
chr4	86016489	86357732	chr4:86016489-86357732	1	-	86017358	86194401	0	14	886,78,64,125,183,72,166,139,59,130,170,72,115,95,	0,12707,14878,47776,51283,82034,84562,85404,86696,90733,142808,177846,338040,341148,
#Partially deleted in new
chr4	86016490	86358874	chr4:86016490-86358874	1	-	86017358	86194401	0	14	885,78,64,125,183,72,166,139,59,130,170,72,115,794,	0,12706,14877,47775,51282,82033,84561,85403,86695,90732,142807,177845,338039,341590,
#Partially deleted in new
chr4	86016490	86360053	chr4:86016490-86360053	1	-	86017358	86354588	789624	12	885,78,64,125,183,72,166,139,59,130,115,396,	0,12706,14877,47775,51282,82033,84561,85403,86695,90732,338039,343167,
#Partially deleted in new
chr4	86016490	86326557	chr4:86016490-86326557	1	-	86017358	86159419	789624	13	885,78,64,125,183,72,166,139,59,130,170,99,656,	0,12706,14877,47775,51282,82033,84561,85403,86695,90732,142807,177818,309411,
#Partially deleted in new
chr4	86016490	86360038	chr4:86016490-86360038	0	-	86107324	86159419	789624	14	880,78,64,125,183,72,166,139,59,103,170,99,115,381,	0,12706,14877,47775,51282,82033,84561,85403,86695,90732,142807,177818,338039,343167,
#Partially deleted in new
chr4	86016490	86360055	chr4:86016490-86360055	0	-	86101966	86194401	789624	13	880,78,64,125,183,72,166,139,130,170,72,115,398,	0,12706,14877,47775,51282,72715,84561,85403,90732,142807,177845,338039,343167,
#Partially deleted in new
chr4	86016490	86360060	chr4:86016490-86360060	0	-	86067954	86194401	789624	9	885,78,64,125,183,170,72,115,403,	0,12706,14877,47775,51282,142807,177845,338039,343167,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	86016490	86359842	chr4:86016490-86359842	1	-	86017358	86159419	789624	15	885,78,64,125,183,72,166,139,59,130,170,99,186,115,185,	0,12706,14877,47775,51282,82033,84561,85403,86695,90732,142807,177818,305353,338039,343167,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	86016490	86594110	chr4:86016490-86594110	1	-	86017227	86159419	0	15	880,78,64,125,183,72,166,139,59,130,170,99,115,152,201,	0,12706,14877,47775,51282,82033,84561,85403,86695,90732,142807,177818,338039,436539,577419,
#Partially deleted in new
chr4	86016490	86160519	chr4:86016490-86160519	0	-	86016490	86016490	8553170	12	880,78,64,125,183,72,166,139,59,130,170,272,	0,12706,14877,47775,51282,82033,84561,85403,86695,90732,142807,143757,
#Partially deleted in new
chr4	86016492	86358128	chr4:86016492-86358128	1	-	86017358	86159419	789624	14	883,78,64,125,183,72,166,139,59,130,170,99,115,48,	0,12704,14875,47773,51280,82031,84559,85401,86693,90730,142805,177816,338037,341588,
#Partially deleted in new
chr4	86016497	86358512	chr4:86016497-86358512	1	-	86017358	86159419	789624	14	878,78,64,125,183,72,166,139,59,130,170,99,115,305,	0,12699,14870,47768,51275,82026,84554,85396,86688,90725,142800,177811,338032,341710,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr4	86016498	86594088	chr4:86016498-86594088	1	-	86017227	86159419	0	14	872,78,64,125,183,72,166,139,59,130,170,99,152,179,	0,12698,14869,47767,51274,82025,84553,85395,86687,90724,142799,177810,436531,577411,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr4	86016501	86453185	chr4:86016501-86453185	1	-	86017358	86194401	0	14	874,78,64,125,183,72,166,139,59,130,170,72,174,156,	0,12695,14866,47764,51271,82022,84550,85392,86684,90721,142796,177834,260548,436528,
#Partially deleted in new
chr4	86016502	86360053	chr4:86016502-86360053	1	-	86017227	86159419	0	15	868,78,64,125,183,72,166,139,59,130,170,99,60,115,396,	0,12694,14865,47763,51270,82021,84549,85391,86683,90720,142795,177806,335662,338027,343155,
#Partially deleted in new
chr4	86016502	86360072	chr4:86016502-86360072	1	-	86017358	86359660	789624	13	873,78,64,125,183,72,166,139,59,130,170,72,415,	0,12694,14865,47763,51270,82021,84549,85391,86683,90720,142795,177833,343155,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr4	86016521	86594062	chr4:86016521-86594062	1	-	86017227	86194401	789624	16	849,78,64,125,183,72,166,139,59,130,170,72,115,154,152,330,	0,12675,14846,47744,51251,72684,84530,85372,86664,90701,142776,177814,338008,354192,436508,577211,
#Partially deleted in new
chr4	86016532	86358586	chr4:86016532-86358586	0	-	86159415	86194401	789624	14	838,78,64,125,183,72,166,139,59,130,170,89,115,379,	0,12664,14835,47733,51240,81991,84519,85361,86653,90690,142765,177786,337997,341675,
#Partially deleted in new
chr4	86016533	86031972	chr4:86016533-86031972	0	-	86016533	86016533	8553170	3	837,78,605,	0,12663,14834,
#Partially deleted in new
chr4	86016533	86594088	chr4:86016533-86594088	1	-	86017227	86194401	0	15	837,78,64,125,183,72,166,139,59,130,170,72,115,60,179,	0,12663,14834,47732,51239,81990,84518,85360,86652,90689,142764,177802,337996,383213,577376,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	86016535	86453103	chr4:86016535-86453103	1	-	86017227	86159419	0	15	835,78,64,125,183,72,166,139,59,130,170,99,115,154,74,	0,12661,14832,47730,51237,81988,84516,85358,86650,90687,142762,177773,337994,354178,436494,
#Partially deleted in new
chr4	86016603	86594131	chr4:86016603-86594131	1	-	86017227	86194401	789624	8	767,78,64,130,170,72,115,222,	0,12593,14764,90619,142694,177732,337926,577306,
#Partially deleted in new
chr4	86016617	86360051	chr4:86016617-86360051	0	-	86159415	86194401	789624	13	753,78,64,125,183,72,166,139,59,130,170,89,394,	0,12579,14750,47648,51155,81906,84434,85276,86568,90605,142680,177701,343040,
#Partially deleted in new
chr4	86016627	86360076	chr4:86016627-86360076	1	-	86017358	86194401	0	16	748,78,64,125,183,72,166,139,59,130,170,72,115,58,387,419,	0,12569,14740,47638,51145,81896,84424,85266,86558,90595,142670,177708,337902,339834,340038,343030,
#Partially deleted in new
chr4	86016628	86360053	chr4:86016628-86360053	1	-	86017227	86159419	0	15	742,78,64,125,183,72,166,139,59,130,170,99,115,58,396,	0,12568,14739,47637,51144,81895,84423,85265,86557,90594,142669,177680,337901,339833,343029,
#Partially deleted in new
chr4	86016628	86277129	chr4:86016628-86277129	0	-	86152116	86194401	789624	14	742,78,64,125,183,72,166,139,59,130,154,170,72,80,	0,12568,14739,47637,51144,81895,84423,85265,86557,90594,135362,142669,177707,260421,
#Partially deleted in new
chr4	86016628	86360053	chr4:86016628-86360053	0	-	86152116	86159419	789624	15	742,78,64,125,183,72,166,139,59,130,154,170,99,115,396,	0,12568,14739,47637,51144,81895,84423,85265,86557,90594,135362,142669,177680,337901,343029,
#Partially deleted in new
chr4	86016628	86159466	chr4:86016628-86159466	0	-	86152116	86159466	789624	12	747,78,64,125,183,72,166,139,59,130,154,169,	0,12568,14739,47637,51144,81895,84423,85265,86557,90594,135362,142669,
#Partially deleted in new
chr4	86016733	86359911	chr4:86016733-86359911	0	-	86152628	86194401	789624	15	637,78,64,125,183,72,166,139,59,130,167,170,72,115,254,	0,12463,14634,47532,51039,81790,84318,85160,86452,90489,135729,142564,177602,337796,342924,
#Partially deleted in new
chr4	86016756	86360059	chr4:86016756-86360059	0	-	86152628	86159419	789624	17	614,78,64,125,183,72,166,139,59,130,206,167,170,99,115,58,402,	0,12440,14611,47509,51016,81767,84295,85137,86429,90466,135234,135706,142541,177552,337773,339705,342901,
#Partially deleted in new
chr4	86016770	86360010	chr4:86016770-86360010	1	-	86017227	86159419	0	13	600,78,64,125,183,72,166,139,59,130,170,99,353,	0,12426,14597,47495,51002,81753,84281,85123,86415,90452,142527,177538,342887,
#Partially deleted in new
chr4	86016798	86359997	chr4:86016798-86359997	0	-	86152628	86159419	789624	17	577,78,64,125,183,72,133,166,139,59,130,206,167,170,99,115,340,	0,12398,14569,47467,50974,72407,73506,84253,85095,86387,90424,135192,135664,142499,177510,337731,342859,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr4	86016869	86594074	chr4:86016869-86594074	1	-	86017227	86194401	0	14	501,78,64,125,183,72,166,139,59,130,170,72,152,165,	0,12327,14498,47396,50903,81654,84182,85024,86316,90353,142428,177466,436160,577040,
#Partially deleted in new
chr4	86017064	86117846	chr4:86017064-86117846	0	-	86017064	86017064	8553170	12	306,78,64,125,183,121,113,166,139,59,130,289,	0,12132,14303,47201,50708,62434,63941,83987,84829,86121,90158,100493,
#Partially deleted in new
chr4	86017081	86359849	chr4:86017081-86359849	0	-	86152628	86194401	789624	16	289,78,64,125,183,72,166,139,59,130,154,167,170,72,115,192,	0,12115,14286,47184,50691,81442,83970,84812,86104,90141,134909,135381,142216,177254,337448,342576,
#Partially deleted in new
chr4	86017176	86360039	chr4:86017176-86360039	1	-	86017227	86194401	0	16	194,78,64,125,183,72,166,139,59,130,170,72,115,58,387,382,	0,12020,14191,47089,50596,81347,83875,84717,86009,90046,142121,177159,337353,339285,339489,342481,
#Partially deleted in new
chr4	86017224	86359665	chr4:86017224-86359665	0	-	86107324	86159419	789624	14	151,78,64,125,183,72,166,139,59,103,170,99,115,8,	0,11972,14143,47041,50548,81299,83827,84669,85961,89998,142073,177084,337305,342433,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	86020221	86031431	chr4:86020221-86031431	0	-	86020821	86031431	789624	3	644,78,64,	0,8975,11146,
#Partially deleted in new
chr4	86023930	86360055	chr4:86023930-86360055	1	-	86025468	86194401	789624	14	1642,78,64,125,183,72,166,139,59,130,170,72,115,398,	0,5266,7437,40335,43842,74593,77121,77963,79255,83292,135367,170405,330599,335727,
#Partially deleted in new
chr4	86026435	86360053	chr4:86026435-86360053	1	-	86029179	86194401	789624	13	2839,64,125,183,72,166,139,59,130,170,72,115,396,	0,4932,37830,41337,72088,74616,75458,76750,80787,132862,167900,328094,333222,
#Partially deleted in new
chr4	86026508	86360053	chr4:86026508-86360053	1	-	86029179	86159419	789624	13	2766,64,125,183,72,166,139,59,130,170,99,115,396,	0,4859,37757,41264,72015,74543,75385,76677,80714,132789,167800,328021,333149,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	86029211	86360025	chr4:86029211-86360025	0	-	86029211	86194401	789624	13	63,64,125,183,72,166,139,59,130,170,72,174,368,	0,2156,35054,38561,69312,71840,72682,73974,78011,130086,165124,247838,330446,
#Partially deleted in new
chr4	86044539	86354582	chr4:86044539-86354582	1	-	86044734	86194401	789624	11	216,125,183,72,166,139,59,130,170,72,53,	0,19726,23233,53984,56512,57354,58646,62683,114758,149796,309990,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	86064336	86360051	chr4:86064336-86360051	0	-	86064336	86194401	789624	12	54,183,72,166,139,59,130,170,72,174,115,394,	0,3436,34187,36715,37557,38849,42886,94961,129999,212713,290193,295321,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	86064336	86453319	chr4:86064336-86453319	0	-	86064336	86107246	789624	9	54,183,166,139,59,130,72,128,290,	0,3436,36715,37557,38849,42886,129999,365341,388693,
#Partially deleted in new
chr4	86064354	86360053	chr4:86064354-86360053	0	-	86064354	86064354	8553170	10	36,183,2694,139,59,130,170,99,115,396,	0,3418,34169,37539,38831,42868,94943,129954,290175,295303,
#Partially deleted in new
chr4	86067823	86089549	chr4:86067823-86089549	0	-	86067823	86067823	8553170	2	132,344,	0,21382,
#Partially deleted in new
chr4	86067835	86117853	chr4:86067835-86117853	0	-	86067835	86067835	8553170	7	120,72,166,139,59,130,296,	0,30688,33216,34058,35350,39387,49722,
#Partially deleted in new
chr4	86067843	86082344	chr4:86067843-86082344	0	-	86067843	86067843	8553170	2	112,2846,	0,11655,
#Partially deleted in new
chr4	86067848	86107243	chr4:86067848-86107243	0	-	86099133	86107243	789624	6	107,762,166,139,59,21,	0,30675,33203,34045,35337,39374,
#Partially deleted in new
chr4	86067885	86091470	chr4:86067885-86091470	0	-	86067885	86067885	8553170	3	70,72,1166,	0,21320,22419,
#Partially deleted in new
chr4	86095134	86101922	chr4:86095134-86101922	0	-	86098440	86101922	789624	4	240,28,166,29,	0,3286,5917,6759,
#Partially deleted in new
chr4	86095176	86359822	chr4:86095176-86359822	0	-	86095176	86095176	8553170	9	198,2797,139,59,130,170,99,115,165,	0,3244,6717,8009,12046,64121,99132,259353,264481,
#Partially deleted in new
chr4	86095330	86354644	chr4:86095330-86354644	1	-	86098440	86194401	789624	9	386,28,166,139,59,130,170,72,115,	0,3090,5721,6563,7855,11892,63967,99005,259199,
#Partially deleted in new
chr4	86095601	86117827	chr4:86095601-86117827	0	-	86095601	86095601	8553170	7	115,175,166,139,59,130,270,	0,2819,5450,6292,7584,11621,21956,
#Partially deleted in new
chr4	86100478	86360059	chr4:86100478-86360059	0	-	86100478	86100478	8553170	8	739,139,59,130,170,72,115,402,	0,1415,2707,6744,58819,93857,254051,259179,
#Partially deleted in new
chr4	86101193	86359694	chr4:86101193-86359694	0	-	86101193	86159419	789624	8	24,139,59,130,170,185,115,37,	0,700,1992,6029,58104,231349,253336,258464,
#Partially deleted in new
chr4	86101941	86594110	chr4:86101941-86594110	0	-	86159415	86194401	789624	7	91,130,170,89,115,60,201,	0,5281,57356,92377,252588,297805,491968,
#Partially deleted in new
chr4	86101985	86360083	chr4:86101985-86360083	0	-	86101985	86159419	789624	7	47,59,130,170,115,88,84,	0,1200,5237,57312,252544,257672,258014,
#Partially deleted in new
chr4	86102012	86107564	chr4:86102012-86107564	0	-	86102012	86102012	8553170	3	20,59,342,	0,1173,5210,
#Partially deleted in new
chr4	86102868	86159334	chr4:86102868-86159334	0	-	86102868	86102868	8553170	3	376,130,37,	0,4354,56429,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	86103212	86453165	chr4:86103212-86453165	0	-	86103212	86159419	789624	4	32,130,170,136,	0,4010,56085,349817,
#Partially deleted in new
chr4	86106806	86117766	chr4:86106806-86117766	0	-	86106806	86106806	8553170	2	546,209,	0,10751,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	86107236	86453180	chr4:86107236-86453180	0	-	86107236	86194401	789624	5	116,170,72,60,151,	0,52061,87099,292510,345793,
#Partially deleted in new
chr4	86107242	86358488	chr4:86107242-86358488	0	-	86152168	86159419	789624	6	110,206,170,99,115,281,	0,44748,52055,87066,247287,250965,
#Partially deleted in new
chr4	86107282	86268569	chr4:86107282-86268569	0	-	86107282	86159419	789624	4	70,170,99,425,	0,52015,87026,160862,
#Partially deleted in new
chr4	86107287	86594110	chr4:86107287-86594110	0	-	86107287	86159419	789624	5	65,170,99,115,201,	0,52010,87021,247242,486622,
#Partially deleted in new
chr4	86107342	86359834	chr4:86107342-86359834	0	-	86107342	86159419	789624	6	10,170,99,115,105,177,	0,51955,86966,247187,250865,252315,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	86117911	86127688	chr4:86117911-86127688	0	+	86117911	86117911	8553170	3	51,618,97,	0,2072,9680,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	86119713	86219926	chr4:86119713-86219926	3	+	86119713	86119713	789624	4	170,618,109,152,	0,270,7878,100061,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	86123692	86360059	chr4:86123692-86360059	0	-	86123692	86123692	8553170	5	2252,170,99,115,402,	0,35605,70616,230837,235965,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	86124332	86453142	chr4:86124332-86453142	0	-	86124332	86124332	8553170	5	1612,170,72,115,113,	0,34965,70003,230197,328697,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	86124358	86360060	chr4:86124358-86360060	0	-	86124358	86124358	8553170	5	1586,170,72,115,403,	0,34939,69977,230171,235299,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	86125121	86360028	chr4:86125121-86360028	0	-	86159415	86194401	789624	5	823,170,89,115,371,	0,34176,69197,229408,234536,
#Partially deleted in new
chr4	86159049	86594074	chr4:86159049-86594074	0	-	86159049	86159049	8553170	4	418,99,115,165,	0,35259,195480,434860,
#Partially deleted in new
chr4	86159090	86360058	chr4:86159090-86360058	1	-	86159293	86194401	789624	4	377,72,115,401,	0,35245,195439,200567,
#Partially deleted in new
chr4	86159157	86360103	chr4:86159157-86360103	0	-	86159157	86159157	8553170	4	310,99,115,446,	0,35151,195372,200500,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	86159157	86453144	chr4:86159157-86453144	0	-	86159157	86159157	8553170	7	310,99,115,154,137,60,115,	0,35151,195372,211556,224942,240589,293872,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	86159297	86453185	chr4:86159297-86453185	0	-	86159297	86159419	789624	4	170,99,174,156,	0,35011,117752,293732,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	86159297	86453162	chr4:86159297-86453162	0	-	86159297	86159297	8553170	5	170,89,115,154,133,	0,35021,195232,211416,293732,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	86159357	86354628	chr4:86159357-86354628	0	-	86159357	86194401	789624	5	110,72,186,81,99,	0,34978,162486,175718,195172,
#Partially deleted in new
chr4	86159400	86594110	chr4:86159400-86594110	0	-	86159400	86194401	789624	5	67,72,115,154,201,	0,34935,195129,211313,434509,
#Partially deleted in new
chr4	86159412	86594119	chr4:86159412-86594119	0	-	86159412	86194401	789624	4	55,72,115,387,	0,34923,195117,434320,
#Partially deleted in new
chr4	86159421	86360092	chr4:86159421-86360092	0	-	86159421	86194401	789624	5	46,72,93,115,435,	0,34914,149240,195108,200236,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	86159427	86357740	chr4:86159427-86357740	0	-	86159427	86194401	789624	5	40,72,174,115,103,	0,34908,117622,195102,198210,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	86159445	86453185	chr4:86159445-86453185	0	-	86159445	86194401	789624	6	22,72,174,115,154,156,	0,34890,117604,195084,211268,293584,
#Partially deleted in new
chr4	86164445	86359671	chr4:86164445-86359671	0	-	86164445	86164445	8553170	5	120,93,72,115,14,	0,11541,29890,190084,195212,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	86191597	86360051	chr4:86191597-86360051	0	-	86191597	86191597	8553170	3	2810,115,394,	0,162932,168060,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	86191607	86357695	chr4:86191607-86357695	0	-	86191607	86191607	8553170	3	2800,115,58,	0,162922,166030,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	86191640	86453212	chr4:86191640-86453212	0	-	86191640	86191640	8553170	3	2767,115,183,	0,162889,261389,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	86194379	86453174	chr4:86194379-86453174	0	-	86194379	86194401	789624	5	28,115,154,137,145,	0,160150,176334,189720,258650,
#Partially deleted in new
chr4	86300591	86359984	chr4:86300591-86359984	0	-	86300591	86300591	8553170	3	269,115,327,	0,53938,59066,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	86326328	86457985	chr4:86326328-86457985	0	-	86326328	86326328	8553170	2	1393,42,	0,131615,
#Partially deleted in new
chr4	86336317	86336614	chr4:86336317-86336614	3	-	86336317	86336317	8553170	1	297,	0,
#Partially deleted in new
chr4	86352171	86360051	chr4:86352171-86360051	0	-	86352171	86352171	8553170	3	29,115,394,	0,2358,7486,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	86542481	86542552	chr4:86542481-86542552	3	-	86542481	86542481	5263520	1	71,	0,
#Partially deleted in new
chr4	86594314	86815157	chr4:86594314-86815157	1	+	86635256	86814551	0	47	475,120,179,66,186,88,561,96,94,223,75,175,154,139,153,183,163,418,98,90,108,132,464,132,94,86,160,215,99,365,181,159,172,211,71,62,94,138,89,56,104,149,91,338,216,63,702,	0,40937,78050,92395,94690,99272,106926,122215,122709,127897,138085,138277,139988,140422,141279,147319,150651,156155,156712,163945,164363,164627,168412,170278,171080,172117,173502,175454,175786,176856,178463,180058,180856,181127,186087,187886,190150,190916,191533,202559,204786,209394,210964,213245,215454,216731,220141,
#Partially deleted in new
chr4	86594314	86815171	chr4:86594314-86815171	3	+	86635256	86814551	0	48	475,120,179,66,186,88,561,96,94,223,75,175,154,139,153,183,163,418,98,57,90,108,132,464,147,94,86,160,215,99,365,181,159,172,211,71,62,94,138,89,56,104,149,91,338,216,63,716,	0,40937,78050,92395,94690,99272,106926,122215,122709,127897,138085,138277,139988,140422,141279,147319,150651,156155,156712,158694,163945,164363,164627,168412,170278,171080,172117,173502,175454,175786,176856,178463,180058,180856,181127,186087,187886,190150,190916,191533,202559,204786,209394,210964,213245,215454,216731,220141,
#Partially deleted in new
chr4	86594316	86690303	chr4:86594316-86690303	1	+	86635256	86689757	789624	6	473,120,179,66,186,684,	0,40935,78048,92393,94688,95303,
#Partially deleted in new
chr4	86594731	86815149	chr4:86594731-86815149	1	+	86635256	86814551	0	45	58,120,179,66,186,88,561,96,94,223,75,175,154,139,153,183,163,90,108,132,464,132,94,86,160,215,99,365,181,159,172,211,71,62,94,138,89,56,104,149,91,338,216,63,694,	0,40520,77633,91978,94273,98855,106509,121798,122292,127480,137668,137860,139571,140005,140862,146902,150234,163528,163946,164210,167995,169861,170663,171700,173085,175037,175369,176439,178046,179641,180439,180710,185670,187469,189733,190499,191116,202142,204369,208977,210547,212828,215037,216314,219724,
#Partially deleted in new
chr4	86594731	86815149	chr4:86594731-86815149	1	+	86635256	86814551	0	48	58,120,179,66,186,88,561,96,94,223,75,175,154,139,153,183,163,418,98,57,90,108,132,464,132,94,86,160,215,99,365,181,159,172,211,71,62,94,138,89,56,104,149,91,338,216,63,694,	0,40520,77633,91978,94273,98855,106509,121798,122292,127480,137668,137860,139571,140005,140862,146902,150234,155738,156295,158277,163528,163946,164210,167995,169861,170663,171700,173085,175037,175369,176439,178046,179641,180439,180710,185670,187469,189733,190499,191116,202142,204369,208977,210547,212828,215037,216314,219724,
#Partially deleted in new
chr4	86595692	86689061	chr4:86595692-86689061	0	+	86635256	86689061	789624	5	94,120,179,66,57,	0,39559,76672,91017,93312,
#Partially deleted in new
chr4	86635251	86815149	chr4:86635251-86815149	1	+	86635256	86814551	0	47	120,179,66,186,88,561,96,94,223,75,175,154,139,153,183,163,418,98,57,90,108,132,464,147,94,86,160,215,99,365,181,159,172,211,71,62,94,138,89,56,104,149,91,338,216,63,694,	0,37113,51458,53753,58335,65989,81278,81772,86960,97148,97340,99051,99485,100342,106382,109714,115218,115775,117757,123008,123426,123690,127475,129341,130143,131180,132565,134517,134849,135919,137526,139121,139919,140190,145150,146949,149213,149979,150596,161622,163849,168457,170027,172308,174517,175794,179204,
#Partially deleted in new
chr4	86758668	86762934	chr4:86758668-86762934	0	+	86758668	86758668	8553170	3	117,132,208,	0,273,4058,
#Partially deleted in new
chr4	86763008	86766653	chr4:86763008-86766653	0	+	86763008	86763008	8553170	4	182,147,94,222,	0,1584,2386,3423,
#Partially deleted in new
chr4	86823467	86849263	chr4:86823467-86849263	3	-	86823687	86849115	789624	6	435,158,176,89,119,525,	0,1952,4525,8324,9838,25271,
#Partially deleted in new
chr4	86825447	86849124	chr4:86825447-86849124	0	-	86825447	86825447	8553170	4	130,89,119,386,	0,6344,7858,23291,
#Partially deleted in new
chr4	86870190	86871404	chr4:86870190-86871404	7	+	86870190	86870190	16724991	2	833,28,	0,1186,
#Partially deleted in new
chr4	86876204	86892395	chr4:86876204-86892395	3	-	86887759	86891520	789624	5	239,136,155,138,213,	0,11553,11916,15251,15978,
#Deleted in new
chr4	86876337	86876652	chr4:86876337-86876652	7	+	86876337	86876337	16724991	1	315,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	86886471	86934732	chr4:86886471-86934732	3	-	86887759	86891520	8553170	7	1422,155,138,99,98,148,246,	0,1649,4984,39756,45750,46923,48015,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	86886796	86892410	chr4:86886796-86892410	0	-	86890104	86891520	789624	5	1097,155,91,138,129,	0,1324,3251,4659,5485,
#Partially deleted in new
chr4	86887774	86892416	chr4:86887774-86892416	0	-	86887774	86891520	789624	4	119,155,138,354,	0,346,3681,4288,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	86887844	86892320	chr4:86887844-86892320	0	-	86890082	86891520	789624	5	49,155,111,138,111,	0,276,2203,3611,4365,
#Partially deleted in new
chr4	86887870	86892413	chr4:86887870-86892413	0	-	86887870	86891520	789624	4	23,155,138,132,	0,250,3585,4411,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	86888139	86936178	chr4:86888139-86936178	0	-	86888139	86888139	8553170	5	132,138,99,148,191,	0,3316,38088,45255,47848,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	86888159	86892422	chr4:86888159-86892422	0	-	86888159	86888159	8553170	4	112,111,138,224,	0,1888,3296,4039,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	86913265	86914817	chr4:86913265-86914817	7	-	86913265	86913265	16724991	3	568,424,118,	0,699,1434,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	86924629	86936202	chr4:86924629-86936202	3	-	86924629	86924629	8553170	4	1697,98,148,215,	0,7592,8765,11358,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	86925866	86936179	chr4:86925866-86936179	0	-	86925866	86925866	8553170	4	460,98,148,192,	0,6355,7528,10121,
#Deleted in new
chr4	86933164	86934542	chr4:86933164-86934542	0	-	86933164	86933164	8553170	2	378,56,	0,1322,
#Partially deleted in new
chr4	86935001	87141054	chr4:86935001-87141054	1	+	86948533	87135701	0	21	239,74,121,900,45,87,37,55,55,38,157,933,107,238,92,61,137,72,138,224,5475,	0,13496,111164,111693,149118,154982,156791,159913,170626,170806,173157,179365,190035,191097,192024,192641,196081,196791,197269,199469,200578,
#Partially deleted in new
chr4	86935001	87048049	chr4:86935001-87048049	0	+	86935001	86935001	8553170	3	239,74,1355,	0,13496,111693,
#Partially deleted in new
chr4	86935010	87091824	chr4:86935010-87091824	0	+	86948533	87091824	789624	7	230,74,121,900,42,87,32,	0,13487,111155,111684,149112,154973,156782,
#Partially deleted in new
chr4	86935049	87105682	chr4:86935049-87105682	0	+	86948533	87105682	789624	8	191,74,121,900,45,37,55,55,	0,13448,111116,111645,149070,156743,159865,170578,
#Partially deleted in new
chr4	86935073	86974068	chr4:86935073-86974068	0	+	86935073	86935073	8553170	3	167,74,239,	0,13424,38756,
#Deleted in new
chr4	86935450	86936202	chr4:86935450-86936202	0	-	86935450	86935450	8553170	2	357,215,	0,537,
#Partially deleted in new
chr4	86936409	87046890	chr4:86936409-87046890	0	+	87046733	87046890	789624	4	72,74,121,196,	0,12088,109756,110285,
#Deleted in new
chr4	86949668	86950113	chr4:86949668-86950113	7	-	86949668	86949668	16724991	1	445,	0,
#Partially deleted in new
chr4	87006987	87141038	chr4:87006987-87141038	3	+	87007407	87135701	0	20	437,121,900,45,87,37,55,55,38,157,933,107,238,92,61,137,72,138,221,5459,	0,39178,39707,77132,82996,84805,87927,98640,98820,101171,107379,118049,119111,120038,120655,124095,124805,125283,127486,128592,
#Partially deleted in new
chr4	87007242	87108300	chr4:87007242-87108300	0	+	87089986	87108300	789624	8	182,42,87,37,55,55,38,142,	0,76880,82741,84550,87672,98385,98565,100916,
#Partially deleted in new
chr4	87007395	87135701	chr4:87007395-87135701	1	+	87007407	87135687	789624	23	29,121,900,45,87,37,55,55,38,157,933,107,136,33,66,92,61,137,72,138,224,20,101,	0,38770,39299,76724,82588,84397,87519,98232,98412,100763,106971,117641,118703,118840,118875,119630,120247,123687,124397,124875,127075,128184,128205,
#Partially deleted in new
chr4	87049651	87108312	chr4:87049651-87108312	0	+	87049651	87108312	789624	8	111,45,87,37,55,55,38,154,	0,34468,40332,42141,45263,55976,56156,58507,
#Partially deleted in new
chr4	87114942	87125277	chr4:87114942-87125277	0	+	87114942	87114942	8553170	2	357,241,	0,10094,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	87160102	87220608	chr4:87160102-87220608	3	-	87163518	87195539	789624	10	3540,202,160,169,112,144,187,549,367,191,	0,3775,9976,10344,16654,18374,23100,25148,35221,60315,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	87160248	87220536	chr4:87160248-87220536	1	-	87163518	87195539	789624	10	3394,202,160,169,112,144,187,321,367,119,	0,3629,9830,10198,16508,18228,22954,25002,35075,60169,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	87161042	87220525	chr4:87161042-87220525	1	-	87163518	87195539	789624	9	2600,202,160,169,112,144,187,367,108,	0,2835,9036,9404,15714,17434,22160,34281,59375,
#Partially deleted in new
chr4	87162443	87220463	chr4:87162443-87220463	0	-	87178602	87195539	789624	8	1199,202,160,169,112,144,367,46,	0,1434,7635,8003,14313,16033,32880,57974,
#Partially deleted in new
chr4	87162521	87220268	chr4:87162521-87220268	1	-	87163518	87195539	789624	10	1121,202,160,169,112,144,187,549,367,234,	0,1356,7557,7925,14235,15955,20681,22729,32802,57513,
#Partially deleted in new
chr4	87163882	87220497	chr4:87163882-87220497	0	-	87163882	87163882	8553170	4	197,160,169,80,	0,6196,6564,56535,
#Deleted in new
chr4	87166843	87167734	chr4:87166843-87167734	7	+	87166843	87166843	16724991	1	891,	0,
#Partially deleted in new
chr4	87170198	87220545	chr4:87170198-87220545	0	-	87170198	87170198	8553170	5	40,169,112,144,128,	0,248,6558,8278,50219,
#Deleted in new
chr4	87207091	87208086	chr4:87207091-87208086	7	+	87207091	87207091	16724991	1	995,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	87219523	87240314	chr4:87219523-87240314	0	-	87219523	87219523	8553170	2	1867,57,	0,20734,
#Partially deleted in new
chr4	87261930	87266822	chr4:87261930-87266822	3	-	87261930	87261930	8553170	2	169,88,	0,4804,
#Deleted in new
chr4	87300494	87300583	chr4:87300494-87300583	3	-	87300494	87300494	5263520	1	89,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	87303788	87322886	chr4:87303788-87322886	1	-	87305217	87322841	789624	6	1520,117,138,107,132,255,	0,6454,10034,11704,13303,18843,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	87303788	87322906	chr4:87303788-87322906	3	-	87305217	87322841	789624	7	1520,117,138,107,132,108,275,	0,6454,10034,11704,13303,14540,18843,
#Partially deleted in new
chr4	87336609	87391386	chr4:87336609-87391386	3	-	87337275	87391070	789624	7	757,117,138,107,132,108,526,	0,3880,20669,36099,38089,45645,54251,
#Partially deleted in new
chr4	87337211	87374414	chr4:87337211-87374414	0	-	87337211	87337211	8553170	5	155,117,138,107,54,	0,3278,20067,35497,37149,
#Partially deleted in new
chr4	87337274	87391149	chr4:87337274-87391149	1	-	87337275	87391070	789624	6	92,117,138,107,108,289,	0,3215,20004,35434,44980,53586,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	87386882	87387174	chr4:87386882-87387174	3	-	87386882	87386882	8553170	1	292,	0,
#Deleted in new
chr4	87410643	87411388	chr4:87410643-87411388	7	+	87410643	87410643	16724991	1	745,	0,
#Partially deleted in new
chr4	87422581	87458345	chr4:87422581-87458345	3	+	87422905	87458021	0	8	431,240,96,87,112,147,85,503,	0,12399,15695,19247,26560,29007,31789,35261,
#Partially deleted in new
chr4	87422588	87451714	chr4:87422588-87451714	0	+	87435023	87451714	789624	6	29,240,96,87,112,126,	0,12392,15688,19240,26553,29000,
#Partially deleted in new
chr4	87422593	87435224	chr4:87422593-87435224	0	+	87422593	87422593	8553170	2	419,137,	0,12494,
#Partially deleted in new
chr4	87422596	87459454	chr4:87422596-87459454	1	+	87435023	87458021	0	8	79,240,96,87,112,147,85,1612,	0,12384,15680,19232,26545,28992,31774,35246,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	87422680	87435031	chr4:87422680-87435031	0	+	87422680	87422680	8553170	3	332,183,51,	0,11545,12300,
#Partially deleted in new
chr4	87422808	87457918	chr4:87422808-87457918	0	+	87422905	87457918	789624	7	204,240,87,112,147,85,76,	0,12172,19020,26333,28780,31562,35034,
#Partially deleted in new
chr4	87422881	87454445	chr4:87422881-87454445	0	+	87422905	87451628	789624	4	131,87,147,75,	0,18947,28707,31489,
#Partially deleted in new
chr4	87441870	87454456	chr4:87441870-87454456	0	+	87441870	87441870	8553170	5	45,186,112,147,86,	0,3451,7271,9718,12500,
#Deleted in new
chr4	87460806	87462280	chr4:87460806-87462280	3	-	87460806	87460806	8553170	2	177,314,	0,1160,
#Partially deleted in new
chr4	87473334	87529504	chr4:87473334-87529504	3	-	87473774	87499574	789624	11	469,149,149,137,121,119,73,1017,147,65,460,	0,6095,7037,9089,16938,17425,18283,20247,21646,26186,55710,
#Partially deleted in new
chr4	87473347	87529503	chr4:87473347-87529503	1	-	87473774	87499574	789624	12	456,149,149,137,121,119,73,1017,147,65,102,459,	0,6082,7024,9076,16925,17412,18270,20234,21633,26173,31474,55697,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	87473417	87529092	chr4:87473417-87529092	1	-	87473774	87494424	789624	12	386,149,149,137,121,119,73,1017,147,109,65,48,	0,6012,6954,9006,16855,17342,18200,20164,21563,23713,26103,55627,
#Partially deleted in new
chr4	87494368	87531061	chr4:87494368-87531061	0	-	87494368	87499574	789624	5	230,147,65,57,84,	0,612,5152,34676,36609,
#Partially deleted in new
chr4	87494368	87529404	chr4:87494368-87529404	0	-	87494368	87494424	789624	4	230,163,65,360,	0,612,5152,34676,
#Partially deleted in new
chr4	87494375	87529457	chr4:87494375-87529457	0	-	87494375	87499574	789624	5	223,147,65,102,413,	0,605,5145,10446,34669,
#Partially deleted in new
chr4	87494416	87528619	chr4:87494416-87528619	0	-	87494416	87499574	789624	5	182,147,65,102,65,	0,564,5104,10405,34138,
#Partially deleted in new
chr4	87494439	87531049	chr4:87494439-87531049	0	-	87494439	87499574	789624	6	159,147,65,57,87,72,	0,541,5081,34605,36105,36538,
#Partially deleted in new
chr4	87494532	87529241	chr4:87494532-87529241	0	-	87494532	87499574	789624	5	66,147,65,108,197,	0,448,4988,33593,34512,
#Partially deleted in new
chr4	87495012	87529372	chr4:87495012-87529372	0	-	87495012	87499574	789624	4	115,65,60,328,	0,4508,33542,34032,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	87568034	87732370	chr4:87568034-87732370	3	-	87568034	87568034	8553170	4	499,135,131,56,	0,104955,162328,164280,
#Deleted in new
chr4	87608552	87616910	chr4:87608552-87616910	3	+	87610908	87616568	789624	5	68,79,84,987,3126,	0,2328,3552,3769,5232,
#Partially deleted in new
chr4	87650306	87664361	chr4:87650306-87664361	1	+	87656492	87663320	789624	5	78,75,48,33,2400,	0,6165,6725,8913,11655,
#Partially deleted in new
chr4	87650306	87664361	chr4:87650306-87664361	3	+	87656492	87663320	789624	6	78,75,48,33,48,2400,	0,6165,6725,8913,9124,11655,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	87657092	87673039	chr4:87657092-87673039	0	-	87657092	87657092	8553170	2	317,50,	0,15897,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	87657105	87660796	chr4:87657105-87660796	1	-	87657105	87657105	8553170	3	304,193,94,	0,1674,3597,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	87682997	87733956	chr4:87682997-87733956	0	-	87682997	87682997	8553170	3	307,131,93,	0,47365,50866,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	87743951	87744053	chr4:87743951-87744053	3	-	87743951	87743951	8553170	1	102,	0,
#Deleted in new
chr4	87785919	87786371	chr4:87785919-87786371	7	-	87785919	87785919	16724991	1	452,	0,
#Partially deleted in new
chr4	87799580	87812435	chr4:87799580-87812435	3	+	87802361	87811910	789624	7	53,68,51,78,63,159,1074,	0,2767,2927,3073,6541,11025,11781,
#Partially deleted in new
chr4	87821410	87846817	chr4:87821410-87846817	3	+	87834714	87846446	789624	4	61,66,54,1841,	0,13292,17221,23566,
#Partially deleted in new
chr4	87832916	87846788	chr4:87832916-87846788	1	+	87834714	87846446	789624	5	98,66,54,93,1812,	0,1786,5715,6768,12060,
#Partially deleted in new
chr4	87832949	87846788	chr4:87832949-87846788	1	+	87839741	87846446	789624	6	65,66,136,54,93,1812,	0,1753,4689,5682,6735,12027,
#Partially deleted in new
chr4	87832968	87846788	chr4:87832968-87846788	0	+	87832968	87832968	8553170	6	46,66,54,93,106,1812,	0,1734,5663,6716,6958,12008,
#Partially deleted in new
chr4	87832968	87845266	chr4:87832968-87845266	0	+	87832968	87832968	8553170	5	46,66,54,106,290,	0,1734,5663,6958,12008,
#Partially deleted in new
chr4	87832968	87846817	chr4:87832968-87846817	1	+	87845207	87846446	789624	5	46,66,54,128,1841,	0,1734,5663,6958,12008,
#Partially deleted in new
chr4	87832968	87846817	chr4:87832968-87846817	1	+	87845207	87846446	789624	6	46,66,54,93,106,1841,	0,1734,5663,6716,6958,12008,
#Partially deleted in new
chr4	87832976	87845240	chr4:87832976-87845240	1	+	87834714	87845031	789624	5	38,66,54,128,264,	0,1726,5655,6950,12000,
#Partially deleted in new
chr4	87832986	87846814	chr4:87832986-87846814	1	+	87834714	87846446	789624	4	28,66,54,1838,	0,1716,5645,11990,
#Partially deleted in new
chr4	87891842	87894015	chr4:87891842-87894015	7	+	87891842	87891842	16724991	1	2173,	0,
#Partially deleted in new
chr4	87975649	87983410	chr4:87975649-87983410	1	+	87976895	87982896	0	8	151,68,39,81,42,61,197,919,	0,1232,1409,4396,4743,5825,5952,6842,
#Partially deleted in new
chr4	87975666	87983426	chr4:87975666-87983426	3	+	87976895	87982896	0	6	134,68,39,81,324,935,	0,1215,1392,4379,5808,6825,
#Partially deleted in new
chr4	87975687	87983297	chr4:87975687-87983297	1	+	87976895	87982896	0	7	113,68,39,81,42,324,806,	0,1194,1371,4358,4705,5787,6804,
#Partially deleted in new
chr4	87975713	87983127	chr4:87975713-87983127	1	+	87976895	87982896	0	6	87,68,39,42,324,636,	0,1168,1345,4679,5761,6778,
#Deleted in new
chr4	87975713	87978024	chr4:87975713-87978024	0	+	87975713	87975713	8553170	4	87,68,39,363,	0,1168,1345,1948,
#Partially deleted in new
chr4	87975713	87982798	chr4:87975713-87982798	0	+	87976895	87982798	789624	5	87,68,39,324,307,	0,1168,1345,5761,6778,
#Partially deleted in new
chr4	87975713	87981761	chr4:87975713-87981761	0	+	87975713	87975713	8553170	6	87,68,39,198,81,287,	0,1168,1345,1948,4332,5761,
#Partially deleted in new
chr4	87975713	87981678	chr4:87975713-87981678	0	+	87975713	87975713	8553170	7	87,68,39,198,81,42,204,	0,1168,1345,1948,4332,4679,5761,
#Partially deleted in new
chr4	87975714	87983326	chr4:87975714-87983326	0	+	87975714	87975714	8553170	8	86,68,39,189,81,42,324,835,	0,1167,1344,1947,4331,4678,5760,6777,
#Partially deleted in new
chr4	87975716	87980688	chr4:87975716-87980688	0	+	87975716	87975716	8553170	5	84,68,39,81,296,	0,1165,1342,4329,4676,
#Partially deleted in new
chr4	87976879	87980188	chr4:87976879-87980188	0	+	87976879	87976879	8553170	3	70,39,143,	0,179,3166,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	88000236	88000401	chr4:88000236-88000401	3	+	88000236	88000236	8553170	1	165,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	88007667	88077777	chr4:88007667-88077777	3	+	88007733	88075694	0	15	661,114,134,251,225,229,168,182,121,99,122,118,164,148,2320,	0,11790,28552,30583,35565,38974,44323,48418,50315,54238,57706,58094,60230,67144,67790,
#Partially deleted in new
chr4	88008231	88038371	chr4:88008231-88038371	0	+	88008231	88008231	8553170	4	97,114,218,121,	0,11226,27904,30019,
#Partially deleted in new
chr4	88036063	88043384	chr4:88036063-88043384	0	+	88036063	88036063	8553170	3	290,251,152,	0,2187,7169,
#Partially deleted in new
chr4	88043260	88075858	chr4:88043260-88075858	1	+	88056115	88075694	789624	10	197,168,182,121,99,122,118,164,148,401,	0,8730,12825,14722,18645,22113,22501,24637,31551,32197,
#Partially deleted in new
chr4	88052069	88075897	chr4:88052069-88075897	0	+	88052069	88052069	8553170	8	89,182,99,122,118,164,148,440,	0,4016,9836,13304,13692,15828,22742,23388,
#Partially deleted in new
chr4	88052109	88075863	chr4:88052109-88075863	0	+	88052109	88052109	8553170	7	49,182,99,506,164,148,406,	0,3976,9796,13264,15788,22702,23348,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	88056065	88075705	chr4:88056065-88075705	1	+	88056115	88075694	789624	8	202,121,99,122,118,164,148,248,	0,1917,5840,9308,9696,11832,18746,19392,
#Partially deleted in new
chr4	88090263	88231322	chr4:88090263-88231322	1	-	88092355	88139995	0	16	2118,83,80,155,125,90,83,251,102,152,158,153,115,60,222,329,	0,4313,5256,7189,9060,10966,16920,23039,24693,27845,31371,40797,41539,42312,49529,140730,
#Partially deleted in new
chr4	88090268	88158912	chr4:88090268-88158912	3	-	88092233	88139995	0	16	2113,83,90,155,125,90,83,251,102,152,158,153,115,60,222,527,	0,4308,5251,7184,9055,10961,16915,23034,24688,27840,31366,40792,41534,42307,49524,68117,
#Partially deleted in new
chr4	88131843	88159323	chr4:88131843-88159323	0	-	88131843	88139995	789624	4	74,60,222,119,	0,732,7949,27361,
#Partially deleted in new
chr4	88131843	88159024	chr4:88131843-88159024	0	-	88131843	88139995	789624	4	74,60,222,448,	0,732,7949,26733,
#Partially deleted in new
chr4	88163578	88163967	chr4:88163578-88163967	7	+	88163578	88163578	16724991	1	389,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	88201702	88201810	chr4:88201702-88201810	3	+	88201702	88201702	8553170	1	108,	0,
#Partially deleted in new
chr4	88206426	88206552	chr4:88206426-88206552	3	-	88206426	88206426	8553170	1	126,	0,
#Partially deleted in new
chr4	88220568	88223837	chr4:88220568-88223837	7	-	88220568	88220568	16724991	2	78,173,	0,3096,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	88226728	88226829	chr4:88226728-88226829	3	+	88226728	88226728	8553170	1	101,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	88257619	88284736	chr4:88257619-88284736	3	-	88262594	88278583	0	7	5107,135,145,166,101,499,331,	0,7381,10570,11121,19523,20524,26786,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	88261870	88284578	chr4:88261870-88284578	1	-	88262594	88278583	789624	6	856,145,166,101,499,173,	0,6319,6870,15272,16273,22535,
#Partially deleted in new
chr4	88262576	88284631	chr4:88262576-88284631	1	-	88262594	88268790	789624	6	150,135,145,166,101,226,	0,2424,5613,6164,14566,21829,
#Partially deleted in new
chr4	88268321	88284590	chr4:88268321-88284590	0	-	88268321	88268790	789624	5	13,166,101,107,185,	0,419,8821,10214,16084,
#Partially deleted in new
chr4	88268749	88277567	chr4:88268749-88277567	0	-	88268749	88268749	8553170	2	157,425,	0,8393,
#Partially deleted in new
chr4	88268761	88284561	chr4:88268761-88284561	0	-	88268761	88268761	8553170	5	145,190,101,499,156,	0,2238,8381,9382,15644,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	88274923	88279700	chr4:88274923-88279700	0	-	88274923	88274923	8553170	1	4777,	0,
#Partially deleted in new
chr4	88275144	88284769	chr4:88275144-88284769	1	-	88277134	88278583	789624	3	2099,499,364,	0,2999,9261,
#Partially deleted in new
chr4	88275204	88275308	chr4:88275204-88275308	3	-	88275204	88275204	8553170	1	104,	0,
#Partially deleted in new
chr4	88278192	88283890	chr4:88278192-88283890	0	-	88278192	88278583	789624	2	450,116,	0,5582,
#Partially deleted in new
chr4	88278566	88284261	chr4:88278566-88284261	0	-	88278566	88278583	8553170	2	76,487,	0,5208,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	88284941	88331421	chr4:88284941-88331421	3	+	88284941	88284941	789624	5	120,76,122,95,1241,	0,26854,31744,34389,45239,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	88330175	88330278	chr4:88330175-88330278	3	-	88330175	88330175	8553170	1	103,	0,
#Partially deleted in new
chr4	88378738	88443096	chr4:88378738-88443096	1	+	88378921	88405567	789624	20	382,160,77,228,95,128,68,60,94,190,113,108,171,144,167,67,71,184,103,863,	0,4482,6760,11913,14749,17276,19403,26815,29785,34338,45122,45856,49841,52423,56986,58166,58972,61135,61409,63495,
#Partially deleted in new
chr4	88378738	88443097	chr4:88378738-88443097	1	+	88378921	88442460	789624	22	382,160,77,228,95,128,137,68,122,60,94,190,155,114,171,144,167,67,71,184,103,864,	0,4482,6760,11913,14749,17276,18112,19403,26137,26815,29785,34338,38686,45121,49841,52423,56986,58166,58972,61135,61409,63495,
#Partially deleted in new
chr4	88378862	88443111	chr4:88378862-88443111	3	+	88378921	88442460	789624	23	258,160,77,228,95,128,137,68,122,60,94,190,155,114,108,171,144,167,67,71,184,103,878,	0,4358,6636,11789,14625,17152,17988,19279,26013,26691,29661,34214,38562,44997,45732,49717,52299,56862,58042,58848,61011,61285,63371,
#Partially deleted in new
chr4	88378910	88390732	chr4:88378910-88390732	0	+	88378921	88383254	789624	4	210,149,77,81,	0,4321,6588,11741,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	88378990	88399769	chr4:88378990-88399769	0	+	88378990	88378990	8553170	8	130,160,77,228,95,128,102,1373,	0,4230,6508,11661,14497,17024,19117,19406,
#Partially deleted in new
chr4	88379063	88390878	chr4:88379063-88390878	0	+	88379063	88390878	789624	4	57,196,77,227,	0,4121,6435,11588,
#Partially deleted in new
chr4	88390819	88405025	chr4:88390819-88405025	0	+	88390819	88390819	8553170	6	60,95,128,137,68,150,	0,2668,5195,6031,7322,14056,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	88439844	88440640	chr4:88439844-88440640	0	+	88439844	88439844	8553170	2	213,493,	0,303,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr4	88457116	88506163	chr4:88457116-88506163	3	+	88457269	88505878	789624	23	418,124,77,222,92,131,146,77,104,60,94,190,155,114,111,171,144,167,67,71,184,103,491,	0,2230,2978,5018,6415,6738,9942,11229,12040,13497,15292,18724,22236,28998,29952,32049,35895,37048,42809,43798,47115,47378,48556,
#Partially deleted in new
chr4	88457892	88462263	chr4:88457892-88462263	0	+	88457892	88457892	8553170	4	213,124,77,129,	0,1454,2202,4242,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr4	88467855	88506022	chr4:88467855-88506022	1	+	88468374	88505878	789624	17	81,77,104,60,94,190,155,114,111,171,144,167,67,71,184,103,350,	0,490,1301,2758,4553,7985,11497,18259,19213,21310,25156,26309,32070,33059,36376,36639,37817,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	88473009	88506161	chr4:88473009-88506161	0	+	88473009	88473009	8553170	12	880,190,155,114,111,171,144,167,67,71,366,489,	0,2831,6343,13105,14059,16156,20002,21155,26916,27905,31222,32663,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	88473012	88505952	chr4:88473012-88505952	0	+	88473012	88473012	8553170	12	113,190,155,114,111,171,144,167,67,71,366,280,	0,2828,6340,13102,14056,16153,19999,21152,26913,27902,31219,32660,
#Deleted in new
chr4	88508590	88510403	chr4:88508590-88510403	7	-	88508590	88508590	16724991	1	1813,	0,
#Deleted in new
chr4	88520984	88523813	chr4:88520984-88523813	3	-	88521887	88523700	789624	2	1045,316,	0,2513,
#Deleted in new
chr4	88521572	88521789	chr4:88521572-88521789	3	-	88521573	88521789	789624	1	217,	0,
#Partially deleted in new
chr4	88523809	88649847	chr4:88523809-88649847	3	+	88605823	88649847	789624	5	123,58,138,255,8,	0,71747,74140,81985,126030,
#Deleted in new
chr4	88523825	88524983	chr4:88523825-88524983	3	+	88523825	88523825	789624	2	107,219,	0,939,
#Deleted in new
chr4	88523855	88524913	chr4:88523855-88524913	0	+	88523855	88523855	8553170	2	77,158,	0,900,
#Partially deleted in new
chr4	88527159	88528170	chr4:88527159-88528170	7	+	88527159	88527159	16724991	2	48,609,	0,402,
#Deleted in new
chr4	88583665	88583972	chr4:88583665-88583972	3	-	88583665	88583665	8553170	1	307,	0,
#Partially deleted in new
chr4	88592422	88708542	chr4:88592422-88708542	3	+	88605823	88706960	789624	26	152,58,255,160,77,222,92,131,161,77,125,60,112,190,164,114,24,90,171,144,167,67,83,184,103,1791,	0,3134,13372,57417,59589,60446,61619,62751,63452,65992,70008,71730,74954,75469,77437,77716,83795,83911,85541,87670,88736,94313,94794,111675,112085,114329,
#Partially deleted in new
chr4	88592433	88652020	chr4:88592433-88652020	0	+	88605823	88652020	789624	6	141,58,138,255,160,9,	0,3123,5516,13361,57406,59578,
#Partially deleted in new
chr4	88592483	88649895	chr4:88592483-88649895	0	+	88605823	88649895	789624	5	91,58,119,255,56,	0,3073,5485,13311,57356,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	88592495	88657434	chr4:88592495-88657434	1	+	88605823	88656073	789624	9	79,58,255,160,77,222,92,131,1560,	0,3061,13299,57344,59516,60373,61546,62678,63379,
#Partially deleted in new
chr4	88593250	88649998	chr4:88593250-88649998	0	+	88605823	88649998	789624	4	87,58,255,159,	0,2306,12544,56589,
#Partially deleted in new
chr4	88593377	88653088	chr4:88593377-88653088	0	+	88605823	88653088	789624	6	117,58,255,160,77,220,	0,2179,12417,56462,58634,59491,
#Partially deleted in new
chr4	88605793	88708541	chr4:88605793-88708541	1	+	88605823	88706960	789624	24	256,160,77,222,92,131,161,77,125,60,112,190,164,114,24,90,171,144,167,67,83,184,103,1790,	0,44046,46218,47075,48248,49380,50081,52621,56637,58359,61583,62098,64066,64345,70424,70540,72170,74299,75365,80942,81423,98304,98714,100958,
#Partially deleted in new
chr4	88658267	88670202	chr4:88658267-88670202	0	+	88658267	88658267	8553170	4	224,112,164,64,	0,9109,11592,11871,
#Partially deleted in new
chr4	88667455	88668653	chr4:88667455-88668653	0	+	88667455	88667455	8553170	3	33,190,118,	0,436,1080,
#Partially deleted in new
chr4	88670138	88687299	chr4:88670138-88687299	0	+	88670138	88687299	789624	7	114,90,171,144,167,67,83,	0,6195,7825,9954,11020,16597,17078,
#Deleted in new
chr4	88695914	88697829	chr4:88695914-88697829	3	-	88697205	88697754	789624	1	1915,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	88709788	88730103	chr4:88709788-88730103	3	+	88709788	88709788	789624	5	477,163,194,107,2269,	0,2066,12362,13420,18046,
#Deleted in new
chr4	88710146	88710265	chr4:88710146-88710265	3	+	88710146	88710146	8553170	1	119,	0,
#Deleted in new
chr4	88721714	88728686	chr4:88721714-88728686	1	+	88721714	88721714	8553170	2	1601,852,	0,6120,
#Deleted in new
chr4	88723208	88723316	chr4:88723208-88723316	3	+	88723208	88723208	8553170	1	108,	0,
#Partially deleted in new
chr4	88725954	89057172	chr4:88725954-89057172	3	-	88728532	89056964	789624	24	2705,102,197,84,96,84,221,82,139,214,148,43,77,187,180,42,42,164,84,154,178,210,190,235,	0,5372,6047,11517,13075,20977,21676,22997,23816,24469,32799,41598,42028,55210,61798,64631,79056,125065,180424,212133,265018,294505,303505,330983,
#Partially deleted in new
chr4	88725954	88823361	chr4:88725954-88823361	1	-	88728532	88823004	789624	17	2705,102,197,96,84,221,82,139,214,148,43,77,187,180,42,42,386,	0,5372,6047,13075,20977,21676,22997,23816,24469,32799,41598,42028,55210,61798,64631,79056,97021,
#Partially deleted in new
chr4	88727068	88732021	chr4:88727068-88732021	0	-	88727068	88727068	8553170	2	1591,695,	0,4258,
#Partially deleted in new
chr4	88727068	88759469	chr4:88727068-88759469	0	-	88727068	88727068	8553170	10	1591,102,197,96,84,221,82,139,214,716,	0,4258,4933,11961,19863,20562,21883,22702,23355,31685,
#Partially deleted in new
chr4	88727425	88823231	chr4:88727425-88823231	1	-	88728532	88823004	789624	17	1234,102,197,84,96,84,221,82,139,214,148,43,77,187,180,42,256,	0,3901,4576,10046,11604,19506,20205,21526,22345,22998,31328,40127,40557,53739,60327,63160,95550,
#Partially deleted in new
chr4	88727428	89057160	chr4:88727428-89057160	1	-	88728532	88938219	789624	18	1231,102,197,84,96,84,221,82,139,214,148,43,77,84,154,210,190,223,	0,3898,4573,10043,11601,19503,20202,21523,22342,22995,31325,40124,40554,178950,210659,293031,302031,329509,
#Partially deleted in new
chr4	88727654	88823201	chr4:88727654-88823201	1	-	88728532	88823004	789624	18	1005,102,197,84,96,84,221,82,139,214,148,43,77,187,180,42,42,226,	0,3672,4347,9817,11375,19277,19976,21297,22116,22769,31099,39898,40328,53510,60098,62931,77356,95321,
#Partially deleted in new
chr4	88728178	88823230	chr4:88728178-88823230	1	-	88728532	88823004	789624	16	481,102,197,84,96,84,221,82,139,214,148,43,77,187,180,255,	0,3148,3823,9293,10851,18753,19452,20773,21592,22245,30575,39374,39804,52986,59574,94797,
#Deleted in new
chr4	88731328	88736634	chr4:88731328-88736634	0	-	88731328	88731328	8553170	3	100,197,274,	0,673,5032,
#Deleted in new
chr4	88731361	88732559	chr4:88731361-88732559	0	-	88731361	88731361	8553170	2	67,558,	0,640,
#Partially deleted in new
chr4	88731397	88823258	chr4:88731397-88823258	0	-	88759161	88823004	789624	15	31,197,96,84,221,82,139,214,411,43,77,187,180,42,283,	0,604,7632,15534,16233,17554,18373,19026,27356,36155,36585,49767,56355,59188,91578,
#Partially deleted in new
chr4	88731832	88749867	chr4:88731832-88749867	0	-	88731832	88731832	8553170	7	366,84,96,84,221,82,97,	0,5639,7197,15099,15798,17119,17938,
#Deleted in new
chr4	88732121	88737639	chr4:88732121-88737639	0	-	88732121	88732121	8553170	2	77,168,	0,5350,
#Partially deleted in new
chr4	88748951	88823204	chr4:88748951-88823204	0	-	88767583	88823004	789624	10	82,139,214,148,43,187,180,42,42,229,	0,819,1472,9802,18601,32213,38801,41634,56059,74024,
#Partially deleted in new
chr4	88750445	88759166	chr4:88750445-88759166	0	-	88750445	88750445	8553170	2	163,413,	0,8308,
#Partially deleted in new
chr4	88758789	88768414	chr4:88758789-88768414	0	-	88758789	88758789	8553170	3	112,43,432,	0,8763,9193,
#Partially deleted in new
chr4	88767982	89111398	chr4:88767982-89111398	0	-	88767982	88767982	8553170	13	77,187,180,42,42,164,84,154,178,128,210,190,357,	0,13182,19770,22603,37028,83037,138396,170105,222990,240968,252477,261477,343059,
#Partially deleted in new
chr4	88855366	89057150	chr4:88855366-89057150	0	-	88938215	89056964	789624	6	660,84,154,210,190,213,	0,51012,82721,165093,174093,201571,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	88936282	89057162	chr4:88936282-89057162	1	-	88938012	89056964	789624	5	1959,178,210,190,225,	0,54690,84177,93177,120655,
#Partially deleted in new
chr4	88989623	89057345	chr4:88989623-89057345	1	-	88990968	89056964	789624	5	1527,210,190,51,228,	0,30836,39836,67314,67494,
#Partially deleted in new
chr4	89020529	89029900	chr4:89020529-89029900	0	-	89020529	89029706	789624	2	140,441,	0,8930,
#Deleted in new
chr4	89111499	89114899	chr4:89111499-89114899	3	+	89112974	89114552	789624	2	384,2833,	0,567,
#Deleted in new
chr4	89112816	89114899	chr4:89112816-89114899	1	+	89112974	89114552	789624	1	2083,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	89119283	89119871	chr4:89119283-89119871	3	+	89119283	89119283	8553170	1	588,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	89130851	89130953	chr4:89130851-89130953	3	+	89130851	89130851	8553170	1	102,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	89236385	89308010	chr4:89236385-89308010	3	-	89247779	89250110	789624	2	13848,396,	0,71229,
#Deleted in new
chr4	89244934	89251194	chr4:89244934-89251194	1	-	89247779	89250110	789624	1	6260,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	89551355	89691373	chr4:89551355-89691373	0	+	89551355	89551355	8553170	4	215,120,136,89,	0,36465,76426,139929,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	89551389	89726503	chr4:89551389-89726503	3	+	89551389	89551389	8553170	5	70,120,136,121,120,	0,36431,76392,139895,174994,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	89587865	89660355	chr4:89587865-89660355	0	+	89587865	89587865	8553170	4	75,136,104,142,	0,39916,54551,72348,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	89587908	89654661	chr4:89587908-89654661	1	+	89587908	89587908	8553170	6	32,136,104,79,115,81,	0,39873,54508,63207,65362,66672,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	89627783	89720172	chr4:89627783-89720172	0	+	89627783	89627783	8553170	3	134,121,347,	0,63501,92042,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	89681511	89694130	chr4:89681511-89694130	1	+	89681511	89681511	8553170	3	173,121,1716,	0,9773,10903,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	89681522	89686704	chr4:89681522-89686704	1	+	89681522	89681522	8553170	2	162,2260,	0,2922,
#Partially deleted in new
chr4	89720341	89726752	chr4:89720341-89726752	0	+	89720341	89720341	8553170	2	91,369,	0,6042,
#Partially deleted in new
chr4	89724098	89838315	chr4:89724098-89838315	3	-	89726627	89835667	0	6	2562,84,143,42,146,64,	0,5095,98147,104044,111448,114153,
#Partially deleted in new
chr4	89724098	89836976	chr4:89724098-89836976	1	-	89726627	89835667	0	5	2562,143,42,146,234,	0,98147,104044,111448,112644,
#Partially deleted in new
chr4	89724098	89836213	chr4:89724098-89836213	1	-	89726627	89835667	0	5	2562,84,143,146,87,	0,5095,98147,111448,112028,
#Partially deleted in new
chr4	89724104	89837199	chr4:89724104-89837199	1	-	89726627	89835667	0	5	2556,84,143,146,238,	0,5089,98141,111442,112857,
#Partially deleted in new
chr4	89725883	89835680	chr4:89725883-89835680	1	-	89726627	89835667	0	4	777,143,42,134,	0,96362,102259,109663,
#Partially deleted in new
chr4	89726052	89837139	chr4:89726052-89837139	1	-	89726627	89835667	0	6	608,84,143,42,146,397,	0,3141,96193,102090,109494,110690,
#Partially deleted in new
chr4	89726052	89837228	chr4:89726052-89837228	1	-	89726627	89835667	0	6	608,84,143,42,146,267,	0,3141,96193,102090,109494,110909,
#Partially deleted in new
chr4	89726257	89836213	chr4:89726257-89836213	1	-	89726627	89835667	0	6	403,84,143,42,146,87,	0,2936,95988,101885,109289,109869,
#Partially deleted in new
chr4	89726576	89837168	chr4:89726576-89837168	1	-	89726627	89835667	0	6	84,84,143,42,146,71,	0,2617,95669,101566,108970,110521,
#Partially deleted in new
chr4	89726615	89835685	chr4:89726615-89835685	1	-	89726627	89835667	0	4	45,84,143,139,	0,2578,95630,108931,
#Partially deleted in new
chr4	89726627	89835667	chr4:89726627-89835667	1	-	89726627	89835667	789624	3	33,143,121,	0,95618,108919,
#Partially deleted in new
chr4	89743791	89744305	chr4:89743791-89744305	3	+	89743791	89743791	8553170	1	514,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	89747801	89755853	chr4:89747801-89755853	3	+	89747801	89747801	8553170	4	52,256,159,55,	0,1491,3953,7997,
#Partially deleted in new
chr4	89748282	89749154	chr4:89748282-89749154	3	+	89748282	89748282	8553170	1	872,	0,
#Partially deleted in new
chr4	89821848	89835695	chr4:89821848-89835695	1	-	89822203	89835667	789624	3	540,42,149,	0,6294,13698,
#Partially deleted in new
chr4	89822351	89837076	chr4:89822351-89837076	0	-	89822351	89835667	789624	5	37,42,146,47,115,	0,5791,13195,14391,14610,
#Partially deleted in new
chr4	89836407	89841978	chr4:89836407-89841978	3	+	89836407	89836407	789624	4	327,146,60,268,	0,1853,4933,5303,
#Partially deleted in new
chr4	89836423	89840595	chr4:89836423-89840595	1	+	89836423	89836423	8553170	2	311,2335,	0,1837,
#Partially deleted in new
chr4	89879531	89954629	chr4:89879531-89954629	3	+	89894971	89953418	789624	9	71,871,120,107,105,174,1989,147,1633,	0,15192,29744,32412,43636,48263,55278,72073,73465,
#Partially deleted in new
chr4	89894900	89954627	chr4:89894900-89954627	1	+	89894971	89953418	789624	8	694,120,107,105,174,1989,147,1631,	0,14375,17043,28267,32894,39909,56704,58096,
#Partially deleted in new
chr4	89901982	89953455	chr4:89901982-89953455	1	+	89911974	89953418	789624	8	133,120,107,105,174,1989,147,459,	0,7293,9961,21185,25812,32827,49622,51014,
#Deleted in new
chr4	89951444	89953455	chr4:89951444-89953455	0	+	89951444	89951444	8553170	2	307,459,	0,1552,
#Partially deleted in new
chr4	90127534	90923530	chr4:90127534-90923530	0	+	90308284	90663904	789624	10	297,1365,185,94,121,208,91,78,84,161,	0,180709,185328,272501,340699,500490,536310,596379,688227,795835,
#Partially deleted in new
chr4	90127584	91601913	chr4:90127584-91601913	3	+	90308284	91599057	789624	11	247,1365,185,94,121,208,78,84,78,45,3342,	0,180659,185278,272451,340649,500440,596329,688177,795785,958365,1470987,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	90235030	90782004	chr4:90235030-90782004	1	+	90308284	90780465	789624	8	313,1365,185,94,121,208,78,1563,	0,73213,77832,165005,233203,392994,488883,545411,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	90309491	90404131	chr4:90309491-90404131	0	+	90309491	90325706	789624	5	117,185,112,94,208,	0,3371,16104,90544,94432,
#Partially deleted in new
chr4	90312959	90468448	chr4:90312959-90468448	0	+	90312959	90312959	8553170	4	88,94,96,215,	0,87076,90964,155274,
#Partially deleted in new
chr4	90313012	90468622	chr4:90313012-90468622	0	+	90313012	90313012	8553170	3	35,94,389,	0,87023,155221,
#Deleted in new
chr4	90370122	90370427	chr4:90370122-90370427	3	+	90370122	90370122	8553170	1	305,	0,
#Partially deleted in new
chr4	90628020	90642471	chr4:90628020-90642471	0	+	90628020	90641951	789624	2	212,532,	0,13919,
#Partially deleted in new
chr4	90628024	90938832	chr4:90628024-90938832	0	+	90628024	90938735	789624	5	208,78,84,78,157,	0,95889,187737,295345,310651,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	90649507	90780771	chr4:90649507-90780771	0	+	90649507	90649507	8553170	4	117,78,94,330,	0,74406,77696,130934,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	90649510	90911313	chr4:90649510-90911313	0	+	90723922	90911313	789624	5	114,110,78,84,59,	0,43878,74403,166251,261744,
#Deleted in new
chr4	90682995	90683123	chr4:90682995-90683123	7	+	90682995	90682995	16724991	1	128,	0,
#Partially deleted in new
chr4	90815812	90951312	chr4:90815812-90951312	0	+	90815812	90815812	8553170	4	33,103,78,199,	0,95442,107557,135301,
#Deleted in new
chr4	90838902	90839037	chr4:90838902-90839037	7	-	90838902	90838902	16724991	1	135,	0,
#Partially deleted in new
chr4	91085949	91601913	chr4:91085949-91601913	0	+	91085949	91598657	8553170	3	45,46,3342,	0,197859,512622,
#Partially deleted in new
chr4	91108022	91112790	chr4:91108022-91112790	3	-	91108022	91108022	8553170	2	78,192,	0,4576,
#Partially deleted in new
chr4	91319033	91325306	chr4:91319033-91325306	3	-	91319033	91319033	8553170	3	100,82,193,	0,611,6080,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	91603274	91605292	chr4:91603274-91605292	3	+	91603274	91603274	8553170	1	2018,	0,
#Partially deleted in new
chr4	91885045	91885254	chr4:91885045-91885254	7	-	91885045	91885045	16724991	1	209,	0,
#Deleted in new
chr4	92182476	92184052	chr4:92182476-92184052	7	-	92182476	92182476	16724991	1	1576,	0,
#Deleted in new
chr4	92260366	92260751	chr4:92260366-92260751	3	-	92260366	92260366	8553170	1	385,	0,
#Duplicated in new
chr4	92268766	92277075	chr4:92268766-92277075	3	-	92268766	92268766	8553170	2	590,26,	0,8283,
#Partially deleted in new
chr4	92297250	92304178	chr4:92297250-92304178	3	-	92297250	92297250	8553170	3	379,87,126,	0,3548,6802,
#Partially deleted in new
chr4	92303621	93774556	chr4:92303621-93774556	3	+	92304656	93772498	0	16	1123,156,285,206,54,174,162,120,102,198,313,139,196,167,241,2481,	0,286509,781373,807126,903782,913116,920992,934749,1091985,1119149,1152040,1187017,1211594,1322647,1465588,1468454,
#Partially deleted in new
chr4	92304484	93217267	chr4:92304484-93217267	0	+	92304484	92304484	8553170	6	260,156,285,206,54,530,	0,285646,780510,806263,902919,912253,
#Partially deleted in new
chr4	92304656	93772498	chr4:92304656-93772498	1	+	92304656	93772498	0	15	88,156,206,54,174,162,120,102,198,313,139,196,167,241,423,	0,285474,806091,902747,912081,919957,933714,1090950,1118114,1151005,1185982,1210559,1321612,1464553,1467419,
#Deleted in new
chr4	92702344	92702659	chr4:92702344-92702659	7	+	92702344	92702344	16724991	1	315,	0,
#Deleted in new
chr4	92821985	92822918	chr4:92821985-92822918	7	-	92821985	92821985	16724991	1	933,	0,
#Partially deleted in new
chr4	92822948	93166161	chr4:92822948-93166161	0	+	93085005	93164745	789624	5	74,285,206,98,105,	0,262046,287799,341785,343108,
#Partially deleted in new
chr4	92822948	93112247	chr4:92822948-93112247	0	+	92822948	92822948	8553170	4	74,285,206,288,	0,262046,287799,289011,
#Partially deleted in new
chr4	92833684	92838842	chr4:92833684-92838842	3	-	92833684	92833684	8553170	2	289,60,	0,5098,
#Partially deleted in new
chr4	92884662	92885107	chr4:92884662-92885107	7	+	92884662	92884662	16724991	1	445,	0,
#Partially deleted in new
chr4	93084985	93774553	chr4:93084985-93774553	1	+	93084993	93772498	789624	14	294,206,54,174,162,120,102,198,313,139,196,167,241,2478,	0,25762,122418,131752,139628,153385,310621,337785,370676,405653,430230,541283,684224,687090,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	93203948	93238421	chr4:93203948-93238421	0	+	93216905	93238421	789624	5	138,54,174,162,51,	0,3455,12789,20665,34422,
#Partially deleted in new
chr4	93238370	93306322	chr4:93238370-93306322	0	+	93238370	93302603	789624	4	120,48,63,212,	0,20525,64212,67740,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	93318622	93319786	chr4:93318622-93319786	3	-	93318622	93318622	8553170	2	253,188,	0,976,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	93769229	93810157	chr4:93769229-93810157	0	+	93769229	93806873	789624	2	221,3443,	0,37485,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	93820170	93820280	chr4:93820170-93820280	7	+	93820170	93820170	16724991	1	110,	0,
#Deleted in new
chr4	93828752	93830964	chr4:93828752-93830964	3	+	93828926	93829991	789624	1	2212,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	94117791	94207556	chr4:94117791-94207556	3	-	94117791	94117791	789624	9	310,131,142,136,125,32,61,78,27,	0,989,7109,18232,44805,46106,47344,48056,89738,
#Deleted in new
chr4	94195939	94196513	chr4:94195939-94196513	7	-	94195939	94195939	16724991	1	574,	0,
#Partially deleted in new
chr4	94207610	94291290	chr4:94207610-94291290	0	+	94208394	94289534	789624	24	125,239,178,169,67,101,102,82,392,200,91,100,60,76,136,138,96,118,128,189,119,183,110,1818,	0,735,18508,26343,29341,33295,42043,43141,45005,57096,63117,66006,67127,67279,68728,69411,70811,71005,71312,72981,73861,75510,77349,81862,
#Partially deleted in new
chr4	94207844	94290821	chr4:94207844-94290821	1	+	94208394	94289534	789624	24	226,239,178,169,67,101,102,82,392,200,91,100,60,76,136,138,96,118,128,189,119,183,110,1349,	0,501,18274,26109,29107,33061,41809,42907,44771,56862,62883,65772,66893,67045,68494,69177,70577,70771,71078,72747,73627,75276,77115,81628,
#Partially deleted in new
chr4	94207865	94277159	chr4:94207865-94277159	0	+	94208394	94248510	789624	17	205,239,178,169,67,101,73,102,82,392,200,91,100,60,76,136,138,	0,480,18253,26088,29086,33040,40615,41788,42886,44750,56841,62862,65751,66872,67024,68473,69156,
#Partially deleted in new
chr4	94208046	94291292	chr4:94208046-94291292	3	+	94208394	94289534	789624	24	24,239,178,169,67,101,102,82,392,200,91,100,60,76,136,138,96,118,122,189,119,183,110,1820,	0,299,18072,25907,28905,32859,41607,42705,44569,56660,62681,65570,66691,66843,68292,68975,70375,70569,70882,72545,73425,75074,76913,81426,
#Partially deleted in new
chr4	94208083	94289899	chr4:94208083-94289899	0	+	94208394	94213057	789624	25	159,239,118,178,169,67,101,102,82,392,200,91,100,60,76,136,138,96,118,128,189,119,183,110,427,	0,262,4951,18035,25870,28868,32822,41570,42668,44532,56623,62644,65533,66654,66806,68255,68938,70338,70532,70839,72508,73388,75037,76876,81389,
#Partially deleted in new
chr4	94253293	94289704	chr4:94253293-94289704	1	+	94264715	94289534	789624	16	378,200,91,100,60,76,136,138,96,118,122,189,119,183,110,232,	0,11413,17434,20323,21444,21596,23045,23728,25128,25322,25635,27298,28178,29827,31666,36179,
#Partially deleted in new
chr4	94264527	94273700	chr4:94264527-94273700	0	+	94264527	94264527	8553170	3	379,91,84,	0,6200,9089,
#Partially deleted in new
chr4	94270566	94274921	chr4:94270566-94274921	0	+	94270566	94270566	8553170	4	252,100,60,32,	0,3050,4171,4323,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	94298534	94342876	chr4:94298534-94342876	3	-	94299479	94334629	0	6	1110,99,110,93,142,82,	0,3611,10099,19338,35962,44260,
#Partially deleted in new
chr4	94303762	94342865	chr4:94303762-94342865	0	-	94303762	94303762	8553170	5	159,110,93,142,71,	0,4871,14110,30734,39032,
#Partially deleted in new
chr4	94334180	94342876	chr4:94334180-94342876	0	-	94334180	94334180	8553170	2	458,82,	0,8614,
#Partially deleted in new
chr4	94369832	94370163	chr4:94369832-94370163	7	+	94369832	94369832	16724991	1	331,	0,
#Partially deleted in new
chr4	94451856	94588216	chr4:94451856-94588216	1	+	94455288	94587082	0	10	139,138,152,43,17,15,18,173,37,1228,	0,3390,71867,121494,127664,130860,133129,133708,134551,135132,
#Partially deleted in new
chr4	94451856	94588216	chr4:94451856-94588216	1	+	94455288	94587082	0	9	139,138,152,43,92,18,173,37,1228,	0,3390,71867,121494,124086,133129,133708,134551,135132,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	94451856	94668227	chr4:94451856-94668227	1	+	94618058	94664067	789624	12	139,138,152,43,173,37,188,175,181,121,116,4250,	0,3390,71867,121494,133708,134551,166147,188419,202603,205570,210565,212121,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr4	94451856	94668227	chr4:94451856-94668227	1	+	94455288	94664067	0	17	139,138,152,43,92,18,173,37,120,144,132,188,175,181,121,116,4250,	0,3390,71867,121494,124086,133129,133708,134551,156202,158304,159212,166147,188419,202603,205570,210565,212121,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	94451885	94457184	chr4:94451885-94457184	1	+	94455288	94456558	0	3	110,138,941,	0,3361,4358,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	94451901	94668223	chr4:94451901-94668223	3	+	94455288	94664067	0	13	94,138,152,43,419,173,37,188,175,181,121,116,4246,	0,3345,71822,121449,123714,133663,134506,166102,188374,202558,205525,210520,212076,
#Partially deleted in new
chr4	94451907	94582835	chr4:94451907-94582835	0	+	94451907	94451907	8553170	6	88,138,152,43,92,289,	0,3339,71816,121443,124035,130639,
#Deleted in new
chr4	94451919	94455542	chr4:94451919-94455542	1	+	94455288	94455432	789624	2	76,296,	0,3327,
#Partially deleted in new
chr4	94451927	94573735	chr4:94451927-94573735	0	+	94451927	94451927	8553170	4	68,138,152,385,	0,3319,71796,121423,
#Partially deleted in new
chr4	94451934	94666552	chr4:94451934-94666552	1	+	94455288	94666026	0	15	61,138,152,43,92,18,173,37,188,175,181,121,116,58,528,	0,3312,71789,121416,124008,133051,133630,134473,166069,188341,202525,205492,210487,212043,214090,
#Deleted in new
chr4	94451941	94456164	chr4:94451941-94456164	1	+	94455288	94455839	789624	3	54,138,346,	0,3305,3877,
#Partially deleted in new
chr4	94451942	94664186	chr4:94451942-94664186	0	+	94455288	94573374	789624	12	53,138,43,419,173,37,188,175,181,121,116,209,	0,3304,121408,123673,133622,134465,166061,188333,202517,205484,210479,212035,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	94451955	94665500	chr4:94451955-94665500	1	+	94455288	94664067	0	13	40,138,152,43,92,173,37,188,175,181,121,116,1523,	0,3291,71768,121395,123987,133609,134452,166048,188320,202504,205471,210466,212022,
#Partially deleted in new
chr4	94455244	94588127	chr4:94455244-94588127	1	+	94455288	94587082	0	8	140,152,43,92,18,173,37,1139,	0,68479,118106,120698,129741,130320,131163,131744,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr4	94455244	94665501	chr4:94455244-94665501	1	+	94455288	94664067	0	16	140,152,43,92,18,173,37,120,144,132,188,175,181,121,116,1524,	0,68479,118106,120698,129741,130320,131163,152814,154916,155824,162759,185031,199215,202182,207177,208733,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	94455266	94549986	chr4:94455266-94549986	0	+	94455266	94455266	8553170	3	118,152,193,	0,68457,94527,
#Partially deleted in new
chr4	94489034	94575938	chr4:94489034-94575938	0	+	94489058	94575938	789624	4	36,152,43,323,	0,34689,84316,86581,
#Partially deleted in new
chr4	94523723	94618152	chr4:94523723-94618152	0	+	94523723	94585627	789624	5	152,43,173,37,149,	0,49627,61841,62684,94280,
#Partially deleted in new
chr4	94523724	94587286	chr4:94523724-94587286	0	+	94523724	94587082	789624	6	151,43,92,173,37,298,	0,49626,52218,61840,62683,63264,
#Partially deleted in new
chr4	94523830	94582999	chr4:94523830-94582999	0	+	94523830	94523830	8553170	5	45,43,92,17,283,	0,49520,52112,55690,58886,
#Partially deleted in new
chr4	94579220	94618191	chr4:94579220-94618191	0	+	94579220	94579220	8553170	4	149,173,37,188,	0,6344,7187,38783,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	94584400	94665481	chr4:94584400-94665481	0	+	94584400	94584400	8553170	9	603,173,37,188,175,181,121,116,1504,	0,1164,2007,33603,55875,70059,73026,78021,79577,
#Partially deleted in new
chr4	94675244	94702570	chr4:94675244-94702570	3	+	94675244	94675244	8553170	2	94,121,	0,27205,
#Partially deleted in new
chr4	94743799	94757533	chr4:94743799-94757533	3	-	94743799	94743799	789624	3	295,76,140,	0,11030,13594,
#Partially deleted in new
chr4	94757967	95158448	chr4:94757967-95158448	1	+	95104424	95154673	0	13	101,70,95,160,103,103,97,139,193,298,176,131,3901,	0,117863,238072,346440,356752,357717,365842,367015,371894,373247,390780,394675,396580,
#Partially deleted in new
chr4	94995795	95123835	chr4:94995795-95123835	0	+	95104424	95123835	789624	5	339,160,103,103,26,	0,108612,118924,119889,128014,
#Partially deleted in new
chr4	94996231	95154673	chr4:94996231-95154673	0	+	95104424	95154670	0	11	153,160,103,103,97,139,193,298,176,131,126,	0,108176,118488,119453,127578,128751,133630,134983,152516,156411,158316,
#Partially deleted in new
chr4	95051678	95158441	chr4:95051678-95158441	3	+	95051699	95154673	0	11	94,160,103,103,97,139,193,298,176,131,3894,	0,52729,63041,64006,72131,73304,78183,79536,97069,100964,102869,
#Partially deleted in new
chr4	95051678	95154817	chr4:95051678-95154817	0	+	95104424	95154673	0	11	94,160,103,103,97,139,193,298,176,131,270,	0,52729,63041,64006,72131,73304,78183,79536,97069,100964,102869,
#Partially deleted in new
chr4	95091433	95115789	chr4:95091433-95115789	1	+	95104424	95115778	789624	4	194,160,108,105,	0,12974,23286,24251,
#Partially deleted in new
chr4	95091490	95154817	chr4:95091490-95154817	1	+	95104424	95154673	0	11	137,160,103,103,97,139,193,298,176,131,270,	0,12917,23229,24194,32319,33492,38371,39724,57257,61152,63057,
#Partially deleted in new
chr4	95104354	95155016	chr4:95104354-95155016	1	+	95104424	95154673	0	10	213,103,103,97,139,193,298,176,131,469,	0,10365,11330,19455,20628,25507,26860,44393,48288,50193,
#Partially deleted in new
chr4	95162503	95549206	chr4:95162503-95549206	3	-	95169233	95548857	789624	16	6896,179,165,150,234,169,88,345,192,165,168,181,104,144,222,473,	0,7650,20393,22543,40227,44124,53620,56465,57481,79925,82473,87983,115755,139102,172906,386230,
#Partially deleted in new
chr4	95162503	95335632	chr4:95162503-95335632	1	-	95169233	95335632	789624	15	6896,179,165,150,234,169,88,345,192,165,168,181,104,144,223,	0,7650,20393,22543,40227,44124,53620,56465,57481,79925,82473,87983,115755,139102,172906,
#Partially deleted in new
chr4	95185154	95548972	chr4:95185154-95548972	0	-	95185154	95548857	789624	14	42,234,169,88,345,192,57,165,168,181,104,144,222,239,	0,17576,21473,30969,33814,34830,37055,57274,59822,65332,93104,116451,150255,363579,
#Partially deleted in new
chr4	95216042	95549206	chr4:95216042-95549206	1	-	95216119	95548857	789624	11	169,345,192,57,165,168,181,104,144,222,473,	0,2926,3942,6167,26386,28934,34444,62216,85563,119367,332691,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	95247945	95549200	chr4:95247945-95549200	1	-	95248608	95548857	789624	6	671,181,104,144,222,467,	0,2541,30313,53660,87464,300788,
#Deleted in new
chr4	95549128	95552457	chr4:95549128-95552457	3	+	95549128	95549128	8553170	1	3329,	0,
#Deleted in new
chr4	95644951	95645293	chr4:95644951-95645293	7	-	95644951	95644951	16724991	1	342,	0,
#Deleted in new
chr4	95840018	95841474	chr4:95840018-95841474	3	+	95840150	95841317	789624	1	1456,	0,
#Deleted in new
chr4	95868666	95868764	chr4:95868666-95868764	3	-	95868666	95868666	8553170	1	98,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	96152296	96152403	chr4:96152296-96152403	3	-	96152296	96152296	8553170	1	107,	0,
#Deleted in new
chr4	96212278	96213100	chr4:96212278-96213100	7	+	96212278	96212278	16724991	1	822,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	96310700	96364452	chr4:96310700-96364452	1	+	96310700	96310700	8553170	2	94,1593,	0,52159,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	96310731	96818864	chr4:96310731-96818864	3	+	96310731	96310731	8553170	4	63,70,66,600,	0,140760,270997,507533,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	96348733	96349038	chr4:96348733-96349038	3	-	96348733	96348733	8553170	1	305,	0,
#Partially deleted in new
chr4	96902800	96903050	chr4:96902800-96903050	7	+	96902800	96902800	16724991	1	250,	0,
#Partially deleted in new
chr4	97120700	97135059	chr4:97120700-97135059	3	+	97120700	97120700	8553170	2	65,460,	0,13899,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	97184092	97972354	chr4:97184092-97972354	0	-	97187734	97972354	789624	5	3741,116,160,111,75,	0,528606,656680,759804,788187,
#Partially deleted in new
chr4	97235643	97893203	chr4:97235643-97893203	0	-	97235643	97235643	8553170	5	78,79,134,116,152,	0,5376,27804,477055,657408,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	97334634	97633811	chr4:97334634-97633811	0	-	97334634	97334634	8553170	3	79,87,334,	0,58007,298843,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	97385959	97633823	chr4:97385959-97633823	3	-	97385959	97385959	8553170	5	98,89,87,71,346,	0,1854,6682,186688,247518,
#Partially deleted in new
chr4	97558875	98143240	chr4:97558875-98143240	3	-	97559057	98143150	789624	11	242,116,160,111,161,160,112,113,165,113,199,	0,153823,281897,385021,413404,422283,547077,550317,569552,575471,584166,
#Deleted in new
chr4	97916352	97917401	chr4:97916352-97917401	7	-	97916352	97916352	16724991	1	1049,	0,
#Deleted in new
chr4	98025389	98026240	chr4:98025389-98026240	7	+	98025389	98025389	16724991	1	851,	0,
#Deleted in new
chr4	98048554	98049043	chr4:98048554-98049043	7	+	98048554	98048554	16724991	1	489,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	98251687	98261630	chr4:98251687-98261630	3	-	98251687	98251687	8553170	2	318,79,	0,9864,
#Partially deleted in new
chr4	98261383	98392080	chr4:98261383-98392080	0	+	98261565	98392080	789624	4	186,108,126,129,	0,32024,91092,130568,
#Partially deleted in new
chr4	98261395	98352567	chr4:98261395-98352567	0	+	98261565	98296922	789624	5	174,111,73,123,92,	0,32009,35522,81743,91080,
#Partially deleted in new
chr4	98261416	98442373	chr4:98261416-98442373	1	+	98261565	98442117	0	14	153,111,123,126,129,126,144,132,135,126,140,127,129,384,	0,31988,81722,91059,130535,143060,155328,155950,157240,158602,159838,172519,175523,180573,
#Partially deleted in new
chr4	98261422	98352568	chr4:98261422-98352568	0	+	98261565	98296922	789624	5	147,108,73,123,93,	0,31985,35495,81716,91053,
#Partially deleted in new
chr4	98261430	98442117	chr4:98261430-98442117	1	+	98261565	98442117	0	13	139,111,123,126,126,144,132,135,126,140,127,129,128,	0,31974,81708,91045,143046,155314,155936,157226,158588,159824,172505,175509,180559,
#Partially deleted in new
chr4	98261433	98392245	chr4:98261433-98392245	0	+	98261433	98261433	8553170	6	136,108,123,126,147,294,	0,31974,81705,91042,117583,130518,
#Partially deleted in new
chr4	98261450	98392009	chr4:98261450-98392009	0	+	98261565	98392009	789624	5	119,108,126,147,58,	0,31957,91025,117566,130501,
#Partially deleted in new
chr4	98261452	98443861	chr4:98261452-98443861	3	+	98261565	98442117	0	15	117,108,123,126,147,129,126,144,132,135,126,140,127,129,1872,	0,31955,81686,91023,117564,130499,143024,155292,155914,157204,158566,159802,172483,175487,180537,
#Partially deleted in new
chr4	98261456	98391989	chr4:98261456-98391989	0	+	98261456	98261456	8553170	6	113,111,123,126,72,38,	0,31948,81682,91019,125979,130495,
#Partially deleted in new
chr4	98261459	98379490	chr4:98261459-98379490	0	+	98261459	98261459	8553170	5	110,108,123,126,474,	0,31948,81679,91016,117557,
#Partially deleted in new
chr4	98261460	98404586	chr4:98261460-98404586	0	+	98261565	98404586	789624	5	109,108,123,129,110,	0,31947,81678,130491,143016,
#Partially deleted in new
chr4	98261468	98442666	chr4:98261468-98442666	1	+	98261565	98442117	0	15	101,111,123,126,147,129,126,144,132,135,126,137,127,129,677,	0,31936,81670,91007,117548,130483,143008,155276,155898,157188,158550,159789,172467,175471,180521,
#Partially deleted in new
chr4	98261478	98352588	chr4:98261478-98352588	0	+	98261478	98261478	8553170	4	91,111,181,113,	0,31926,81660,90997,
#Partially deleted in new
chr4	98261485	98391989	chr4:98261485-98391989	0	+	98261565	98352539	789624	5	84,108,181,126,38,	0,31922,81653,90990,130466,
#Partially deleted in new
chr4	98261485	98392041	chr4:98261485-98392041	0	+	98261565	98392041	789624	5	84,111,123,147,90,	0,31919,81653,117531,130466,
#Partially deleted in new
chr4	98261502	98392252	chr4:98261502-98392252	0	+	98261502	98261502	8553170	6	67,111,123,126,147,301,	0,31902,81636,90973,117514,130449,
#Partially deleted in new
chr4	98261517	98442334	chr4:98261517-98442334	1	+	98261565	98442117	0	15	52,111,123,126,147,129,126,144,132,135,126,140,127,129,345,	0,31887,81621,90958,117499,130434,142959,155227,155849,157139,158501,159737,172418,175422,180472,
#Partially deleted in new
chr4	98261517	98442334	chr4:98261517-98442334	1	+	98261565	98442117	0	14	52,108,123,126,129,126,144,132,135,126,140,127,129,345,	0,31890,81621,90958,130434,142959,155227,155849,157139,158501,159737,172418,175422,180472,
#Partially deleted in new
chr4	98352512	98392080	chr4:98352512-98392080	0	+	98352512	98352512	8553170	4	89,147,68,129,	0,26504,34923,39439,
#Partially deleted in new
chr4	98379101	98421283	chr4:98379101-98421283	0	+	98379101	98421283	789624	7	62,129,144,132,135,126,29,	0,12850,37643,38265,39555,40917,42153,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	98379158	98396909	chr4:98379158-98396909	0	+	98379158	98396110	789624	3	5,129,969,	0,12793,16782,
#Deleted in new
chr4	98409289	98409763	chr4:98409289-98409763	7	+	98409289	98409289	16724991	1	474,	0,
#Partially deleted in new
chr4	98470366	98658629	chr4:98470366-98658629	3	-	98472521	98658226	789624	8	2221,117,48,126,171,147,51,484,	0,5822,6046,8318,11638,16371,37311,187779,
#Partially deleted in new
chr4	98470366	98658570	chr4:98470366-98658570	0	-	98476283	98658226	789624	8	2221,117,48,62,171,147,51,425,	0,5822,6046,8318,11638,16371,37311,187779,
#Partially deleted in new
chr4	98472209	98657692	chr4:98472209-98657692	1	-	98472521	98486803	789624	8	378,117,48,126,171,147,51,153,	0,3979,4203,6475,9795,14528,35468,185330,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	98472344	98485532	chr4:98472344-98485532	0	-	98472344	98472344	8553170	5	243,117,48,126,3528,	0,3844,4068,6340,9660,
#Partially deleted in new
chr4	98478684	98658198	chr4:98478684-98658198	0	-	98484429	98658198	789624	6	126,171,57,147,51,53,	0,3320,5700,8053,28993,179461,
#Partially deleted in new
chr4	98478699	98560233	chr4:98478699-98560233	0	-	98478699	98478699	8553170	5	111,171,147,51,59,	0,3305,8038,28978,81475,
#Partially deleted in new
chr4	98478716	98657635	chr4:98478716-98657635	0	-	98478716	98486803	789624	5	94,171,147,51,111,	0,3288,8021,28961,178808,
#Partially deleted in new
chr4	98482061	98657649	chr4:98482061-98657649	0	-	98482061	98486803	789624	6	114,147,51,126,162,110,	0,4676,25616,92395,92682,175478,
#Partially deleted in new
chr4	98482100	98657647	chr4:98482100-98657647	0	-	98484547	98486803	789624	5	75,200,147,51,108,	0,2298,4637,25577,175439,
#Partially deleted in new
chr4	98486544	98658294	chr4:98486544-98658294	0	-	98486544	98486544	8553170	3	340,51,149,	0,21133,171601,
#Partially deleted in new
chr4	98496363	98509935	chr4:98496363-98509935	3	+	98496363	98496363	8553170	4	88,173,94,134,	0,161,3814,13438,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	98658903	98664550	chr4:98658903-98664550	3	+	98658903	98658903	8553170	1	5647,	0,
#Deleted in new
chr4	98713803	98713971	chr4:98713803-98713971	7	-	98713803	98713803	16724991	1	168,	0,
#Deleted in new
chr4	98740741	98741231	chr4:98740741-98741231	7	+	98740741	98740741	16724991	1	490,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	98871683	98930637	chr4:98871683-98930637	3	-	98881027	98929112	0	7	9459,140,114,64,96,107,1543,	0,13238,15395,16205,19553,30192,57411,
#Partially deleted in new
chr4	98880764	98929092	chr4:98880764-98929092	1	-	98881027	98928972	0	7	378,140,114,64,96,107,198,	0,4157,6314,7124,10472,21111,48130,
#Partially deleted in new
chr4	98880771	98929125	chr4:98880771-98929125	0	-	98887163	98929112	789624	5	371,140,89,107,31,	0,4150,6307,21104,48323,
#Partially deleted in new
chr4	98880844	98929125	chr4:98880844-98929125	1	-	98881027	98909779	789624	8	298,140,114,64,96,107,282,31,	0,4077,6234,7044,10392,21031,28833,48250,
#Partially deleted in new
chr4	98880844	98929101	chr4:98880844-98929101	0	-	98881064	98929101	789624	6	298,114,64,96,107,7,	0,6234,7044,10392,21031,48250,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	98880897	98929133	chr4:98880897-98929133	1	-	98881027	98929112	0	8	245,140,93,114,64,96,107,39,	0,4024,5556,6181,6991,10339,20978,48197,
#Partially deleted in new
chr4	98881009	98890898	chr4:98881009-98890898	0	-	98881009	98881009	8553170	5	133,140,114,64,112,	0,3912,6069,6879,9777,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	98886350	98929128	chr4:98886350-98929128	0	-	98886350	98886350	8553170	5	842,64,96,107,34,	0,1538,4886,15525,42744,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	98887162	98891571	chr4:98887162-98891571	0	-	98887162	98887162	8553170	3	30,64,335,	0,726,4074,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	98895121	98929133	chr4:98895121-98929133	0	-	98895121	98895121	8553170	3	442,107,39,	0,6754,33973,
#Deleted in new
chr4	98909536	98909848	chr4:98909536-98909848	7	-	98909536	98909536	16724991	1	312,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	98925971	98929125	chr4:98925971-98929125	0	-	98925971	98925971	8553170	2	543,31,	0,3123,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	98928896	98994994	chr4:98928896-98994994	3	+	98928896	98928896	8553170	5	62,175,87,103,195,	0,12884,56709,57598,65903,
#Partially deleted in new
chr4	98955981	98956767	chr4:98955981-98956767	7	+	98955981	98955981	16724991	2	339,134,	0,652,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	98966814	98966873	chr4:98966814-98966873	3	-	98966814	98966814	8553170	1	59,	0,
#Deleted in new
chr4	98976799	98977117	chr4:98976799-98977117	7	-	98976799	98976799	16724991	1	318,	0,
#Partially deleted in new
chr4	98995619	99062813	chr4:98995619-99062813	3	+	98995753	99061317	0	11	248,52,113,61,92,84,139,132,144,66,1660,	0,33247,38610,39780,43754,45423,47629,49559,53113,62133,65534,
#Partially deleted in new
chr4	98995658	99039446	chr4:98995658-99039446	0	+	98995658	98995658	8553170	7	209,52,110,61,47,7,73,	0,33208,38574,39741,40384,42276,43715,
#Partially deleted in new
chr4	98995720	99043319	chr4:98995720-99043319	0	+	98995753	99005801	789624	8	147,98,52,113,61,92,84,71,	0,10048,33146,38509,39679,43653,45322,47528,
#Partially deleted in new
chr4	98995739	99039447	chr4:98995739-99039447	0	+	98995753	99005801	789624	7	128,98,52,113,61,47,54,	0,10029,33127,38490,39660,40303,43654,
#Partially deleted in new
chr4	98995753	99005801	chr4:98995753-99005801	1	+	98995753	99005801	789624	2	114,33,	0,10015,
#Partially deleted in new
chr4	98995765	99041126	chr4:98995765-99041126	0	+	98995765	99005801	789624	8	102,102,52,113,61,47,92,84,	0,10003,33101,38464,39634,40277,43608,45277,
#Partially deleted in new
chr4	98995829	99041126	chr4:98995829-99041126	0	+	98995829	99031533	789624	8	38,52,155,113,61,175,92,84,	0,33037,35678,38400,39570,41937,43544,45213,
#Deleted in new
chr4	98997386	98997460	chr4:98997386-98997460	3	+	98997386	98997386	5263520	1	74,	0,
#Partially deleted in new
chr4	99022294	99043271	chr4:99022294-99043271	0	+	99022294	99022294	8553170	8	130,52,113,61,58,92,84,23,	0,6572,11935,13105,13659,17079,18748,20954,
#Deleted in new
chr4	99022310	99023131	chr4:99022310-99023131	7	-	99022310	99022310	16724991	1	821,	0,
#Partially deleted in new
chr4	99022771	99035460	chr4:99022771-99035460	0	+	99022771	99022771	8553170	4	488,52,113,61,	0,6095,11458,12628,
#Partially deleted in new
chr4	99039202	99045278	chr4:99039202-99045278	0	+	99039202	99039202	8553170	4	263,84,139,100,	0,1840,4046,5976,
#Partially deleted in new
chr4	99043248	99061519	chr4:99043248-99061519	0	+	99043248	99061317	789624	4	139,144,66,366,	0,5484,14504,17905,
#Partially deleted in new
chr4	99045189	99062024	chr4:99045189-99062024	0	+	99045189	99061317	789624	3	121,66,871,	0,12563,15964,
#Deleted in new
chr4	99067255	99068125	chr4:99067255-99068125	3	-	99067255	99067255	8553170	1	870,	0,
#Partially deleted in new
chr4	99070977	99088751	chr4:99070977-99088751	3	-	99072416	99088700	0	9	1464,139,136,261,220,88,142,102,63,	0,1595,3936,5314,5726,10387,10997,14137,17711,
#Partially deleted in new
chr4	99072151	99088751	chr4:99072151-99088751	1	-	99081395	99088700	789624	8	290,139,136,261,220,88,102,63,	0,421,2762,4140,4552,9213,12963,16537,
#Partially deleted in new
chr4	99072185	99085216	chr4:99072185-99085216	0	-	99072185	99072185	8553170	7	526,136,261,220,88,142,102,	0,2728,4106,4518,9179,9789,12929,
#Partially deleted in new
chr4	99074912	99088702	chr4:99074912-99088702	0	-	99081395	99088700	789624	6	137,261,220,88,102,14,	0,1379,1791,6452,10202,13776,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	99075224	99088717	chr4:99075224-99088717	0	-	99075224	99075224	8553170	6	1328,220,88,142,102,29,	0,1479,6140,6750,9890,13464,
#Partially deleted in new
chr4	99076291	99085216	chr4:99076291-99085216	0	-	99076291	99085216	789624	5	261,220,88,115,102,	0,412,5073,5710,8823,
#Partially deleted in new
chr4	99076391	99088704	chr4:99076391-99088704	0	-	99081388	99088700	789624	6	161,220,56,142,102,16,	0,312,4973,5583,8723,12297,
#Partially deleted in new
chr4	99076434	99085623	chr4:99076434-99085623	0	-	99076434	99076434	8553170	6	118,220,88,142,102,210,	0,269,4930,5540,8680,8979,
#Partially deleted in new
chr4	99076796	99080023	chr4:99076796-99080023	0	-	99076796	99076796	8553170	2	127,204,	0,3023,
#Partially deleted in new
chr4	99076852	99088736	chr4:99076852-99088736	0	-	99079987	99088700	789624	6	71,172,88,142,102,48,	0,2967,4512,5122,8262,11836,
#Partially deleted in new
chr4	99080448	99088801	chr4:99080448-99088801	0	-	99080448	99080448	8553170	5	277,88,142,102,113,	0,916,1526,4666,8240,
#Partially deleted in new
chr4	99081673	99088713	chr4:99081673-99088713	0	-	99081673	99081673	8553170	3	443,102,25,	0,3441,7015,
#Partially deleted in new
chr4	99081918	99088713	chr4:99081918-99088713	0	-	99081918	99081918	8553170	4	198,102,220,25,	0,3196,3495,6770,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	99088856	99301356	chr4:99088856-99301356	1	+	99088856	99088856	789624	10	428,251,3035,75,239,120,12,72,187,406,	0,44698,65688,115500,197938,199809,202080,211442,211612,212094,
#Partially deleted in new
chr4	99088950	99102793	chr4:99088950-99102793	0	+	99088950	99088950	8553170	3	334,303,26,	0,13412,13817,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	99123656	99144297	chr4:99123656-99144297	1	-	99124441	99143240	0	10	810,139,136,261,232,88,142,102,140,101,	0,2937,3552,7847,12809,15404,17884,19022,19509,20540,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	99123666	99144297	chr4:99123666-99144297	3	-	99124441	99144222	0	9	800,139,136,261,232,88,142,102,93,	0,2927,3542,7837,12799,15394,17874,19012,20538,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	99123666	99144281	chr4:99123666-99144281	1	-	99124405	99144222	789624	10	775,22,139,136,261,232,88,142,102,77,	0,778,2927,3542,7837,12799,15394,17874,19012,20538,
#Partially deleted in new
chr4	99124363	99136537	chr4:99124363-99136537	0	-	99126717	99136537	789624	4	103,139,261,72,	0,2230,7140,12102,
#Partially deleted in new
chr4	99124378	99144276	chr4:99124378-99144276	1	-	99124441	99143240	0	10	88,139,136,261,232,88,142,102,140,72,	0,2215,2830,7125,12087,14682,17162,18300,18787,19826,
#Partially deleted in new
chr4	99126593	99144276	chr4:99126593-99144276	0	-	99142772	99143240	789624	10	139,136,261,232,88,142,102,28,140,72,	0,615,4910,9872,12467,14947,16085,16450,16572,17611,
#Partially deleted in new
chr4	99131630	99144238	chr4:99131630-99144238	0	-	99131630	99143240	789624	7	134,232,88,142,102,214,34,	0,4835,7430,9910,11048,11535,12574,
#Partially deleted in new
chr4	99131651	99142811	chr4:99131651-99142811	0	-	99131651	99131651	8553170	5	113,232,88,142,133,	0,4814,7409,9889,11027,
#Partially deleted in new
chr4	99131673	99144268	chr4:99131673-99144268	0	-	99131673	99144222	789624	6	91,178,88,142,102,64,	0,4792,7387,9867,11005,12531,
#Partially deleted in new
chr4	99136536	99143206	chr4:99136536-99143206	0	-	99136536	99136536	8553170	3	161,102,41,	0,6142,6629,
#Partially deleted in new
chr4	99139142	99144297	chr4:99139142-99144297	0	-	99142772	99143240	789624	6	6,142,102,28,118,93,	0,2398,3536,3901,4023,5062,
#Partially deleted in new
chr4	99141638	99157792	chr4:99141638-99157792	0	-	99141638	99141638	8553170	3	44,102,169,	0,1040,15985,
#Deleted in new
chr4	99160513	99161265	chr4:99160513-99161265	7	-	99160513	99160513	16724991	1	752,	0,
#Deleted in new
chr4	99160936	99161645	chr4:99160936-99161645	5	-	99160936	99160936	16724991	1	709,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	99161809	99263576	chr4:99161809-99263576	1	+	99161809	99161809	8553170	6	95,71,298,144,66,75,	0,42547,91025,92110,92564,101692,
#Partially deleted in new
chr4	99202637	99219235	chr4:99202637-99219235	1	-	99205003	99219152	789624	7	2426,261,217,88,142,102,101,	0,6030,7444,7777,10968,13523,16497,
#Partially deleted in new
chr4	99202638	99219246	chr4:99202638-99219246	1	-	99204218	99219152	789624	9	1605,139,136,261,217,88,142,102,112,	0,2286,4807,6029,7443,7776,10967,13522,16496,
#Partially deleted in new
chr4	99204018	99219174	chr4:99204018-99219174	0	-	99210445	99219152	789624	7	225,139,136,261,88,102,40,	0,906,3427,4649,6396,12142,15116,
#Deleted in new
chr4	99204018	99208814	chr4:99204018-99208814	0	-	99205003	99208814	789624	3	225,139,147,	0,906,4649,
#Partially deleted in new
chr4	99204721	99219537	chr4:99204721-99219537	3	-	99204920	99219152	789624	8	342,136,261,217,88,142,102,403,	0,2724,3946,5360,5693,8884,11439,14413,
#Partially deleted in new
chr4	99207445	99219243	chr4:99207445-99219243	0	-	99207445	99219152	789624	6	136,261,113,142,102,109,	0,1222,2636,6160,8715,11689,
#Deleted in new
chr4	99208407	99210291	chr4:99208407-99210291	0	-	99208407	99208407	8553170	2	521,210,	0,1674,
#Partially deleted in new
chr4	99215794	99219246	chr4:99215794-99219246	0	-	99215794	99215794	8553170	2	468,112,	0,3340,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	99253928	99275051	chr4:99253928-99275051	3	+	99253928	99253928	8553170	6	135,309,49,201,131,90,	0,9573,13128,13635,20196,21033,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	99267670	99275051	chr4:99267670-99275051	0	+	99267670	99267670	8553170	3	166,131,90,	0,6454,7291,
#Partially deleted in new
chr4	99276366	99291028	chr4:99276366-99291028	3	-	99276623	99290914	0	9	282,139,136,261,220,88,139,102,132,	0,3059,3777,5979,8032,8349,10483,11197,14530,
#Partially deleted in new
chr4	99281814	99291003	chr4:99281814-99291003	0	-	99281814	99281814	8553170	6	792,130,131,139,102,107,	0,2584,2858,5035,5749,9082,
#Deleted in new
chr4	99286664	99290983	chr4:99286664-99290983	0	-	99286664	99286664	8553170	3	324,102,87,	0,899,4232,
#Partially deleted in new
chr4	99290935	99301298	chr4:99290935-99301298	0	+	99290935	99290935	8553170	4	70,72,187,348,	0,9363,9533,10015,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	99304963	99321399	chr4:99304963-99321399	3	-	99307839	99321331	789624	9	2901,139,136,261,220,88,139,102,86,	0,5801,6557,8857,10934,11251,13082,13821,16350,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	99304976	99321399	chr4:99304976-99321399	1	-	99307839	99318184	789624	9	2888,139,136,261,220,88,139,102,86,	0,5788,6544,8844,10921,11238,13069,13808,16337,
#Partially deleted in new
chr4	99307242	99321398	chr4:99307242-99321398	0	-	99307242	99307242	8553170	9	622,139,136,261,220,88,139,2130,85,	0,3522,4278,6578,8655,8972,10803,11542,14071,
#Partially deleted in new
chr4	99307492	99321401	chr4:99307492-99321401	1	-	99307839	99318184	789624	10	372,139,136,261,220,88,139,102,122,88,	0,3272,4028,6328,8405,8722,10553,11292,13300,13821,
#Partially deleted in new
chr4	99307842	99352760	chr4:99307842-99352760	1	-	99307842	99352675	789624	9	22,139,136,261,220,88,139,102,103,	0,2922,3678,5978,8055,8372,10203,10942,44815,
#Deleted in new
chr4	99313504	99318867	chr4:99313504-99318867	0	-	99313504	99313504	8553170	1	5363,	0,
#Deleted in new
chr4	99317664	99321385	chr4:99317664-99321385	0	-	99317664	99317664	8553170	3	520,102,72,	0,1120,3649,
#Partially deleted in new
chr4	99336491	99353027	chr4:99336491-99353027	3	-	99336751	99352675	0	9	285,139,136,261,220,88,139,102,370,	0,3085,4083,6303,8370,8687,10514,11253,16166,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	99342925	99352730	chr4:99342925-99352730	0	-	99342925	99347144	789624	7	130,220,88,139,102,120,73,	0,1936,2253,4080,4819,8087,9732,
#Partially deleted in new
chr4	99343010	99352746	chr4:99343010-99352746	0	-	99343010	99352675	789624	5	45,220,88,139,89,	0,1851,2168,3995,9647,
#Partially deleted in new
chr4	99344887	99352744	chr4:99344887-99352744	0	-	99344887	99344887	8553170	5	194,42,139,102,87,	0,291,2118,2857,7770,
#Partially deleted in new
chr4	99412260	99435510	chr4:99412260-99435510	1	-	99413147	99435269	0	9	912,139,136,261,217,88,139,102,295,	0,3217,6725,8272,15512,15826,16231,17271,22955,
#Partially deleted in new
chr4	99412260	99435737	chr4:99412260-99435737	3	-	99413147	99435233	789624	9	912,139,136,261,217,88,139,102,522,	0,3217,6725,8272,15512,15826,16231,17271,22955,
#Partially deleted in new
chr4	99413005	99435273	chr4:99413005-99435273	1	-	99413147	99428579	789624	10	167,139,136,261,217,88,139,102,113,58,	0,2472,5980,7527,14767,15081,15486,16526,19613,22210,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	99413013	99415874	chr4:99413013-99415874	0	-	99413013	99413013	8553170	2	159,397,	0,2464,
#Partially deleted in new
chr4	99413037	99435134	chr4:99413037-99435134	1	-	99413147	99435104	0	9	135,139,136,261,217,88,139,102,108,	0,2440,5948,7495,14735,15049,15454,16494,21989,
#Deleted in new
chr4	99427842	99430291	chr4:99427842-99430291	0	-	99427842	99428579	789624	5	147,88,139,102,113,	0,244,649,1689,2336,
#Partially deleted in new
chr4	99469597	99498698	chr4:99469597-99498698	7	-	99469597	99469597	16724991	4	219,197,140,102,	0,2068,7150,28999,
#Partially deleted in new
chr4	99511003	99542303	chr4:99511003-99542303	3	+	99513081	99542109	789624	9	269,220,210,65,144,82,208,44,394,	0,1985,11496,13517,18811,26665,28159,29408,30906,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	99511011	99542285	chr4:99511011-99542285	0	+	99513081	99535978	789624	10	261,220,210,65,144,193,82,208,44,376,	0,1977,11488,13509,18803,24952,26657,28151,29400,30898,
#Partially deleted in new
chr4	99511011	99541763	chr4:99511011-99541763	1	+	99513081	99540460	789624	8	261,220,210,65,144,82,208,1352,	0,1977,11488,13509,18803,26657,28151,29400,
#Partially deleted in new
chr4	99519241	99529955	chr4:99519241-99529955	0	+	99519241	99519241	8553170	4	124,210,65,141,	0,3258,5279,10573,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	99546708	99564017	chr4:99546708-99564017	3	-	99549087	99559338	0	8	2648,106,150,75,72,163,197,105,	0,4176,7076,9437,10636,11340,12445,17204,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	99546726	99563668	chr4:99546726-99563668	1	-	99549087	99559338	0	8	2630,106,150,75,72,163,197,301,	0,4158,7058,9419,10618,11322,12427,16641,
#Partially deleted in new
chr4	99548612	99564032	chr4:99548612-99564032	1	-	99549087	99559338	0	8	744,106,150,75,72,163,208,120,	0,2272,5172,7533,8732,9436,10541,15300,
#Partially deleted in new
chr4	99553812	99563730	chr4:99553812-99563730	0	-	99553812	99559338	789624	6	122,75,72,163,197,173,	0,2333,3532,4236,5341,9745,
#Partially deleted in new
chr4	99553830	99563723	chr4:99553830-99563723	0	-	99553830	99559338	789624	6	104,75,72,163,208,166,	0,2315,3514,4218,5323,9727,
#Deleted in new
chr4	99556145	99557530	chr4:99556145-99557530	0	-	99556145	99556145	8553170	2	75,186,	0,1199,
#Partially deleted in new
chr4	99557688	99563672	chr4:99557688-99563672	0	-	99557688	99557688	8553170	3	523,208,115,	0,1465,5869,
#Partially deleted in new
chr4	99563760	99583416	chr4:99563760-99583416	0	+	99563840	99574846	789624	4	171,162,188,43,	0,11048,18144,19613,
#Partially deleted in new
chr4	99563827	99591239	chr4:99563827-99591239	0	+	99563840	99591239	789624	5	104,188,144,108,5,	0,18077,19546,25815,27407,
#Partially deleted in new
chr4	99564080	99583474	chr4:99564080-99583474	0	+	99564095	99574846	789624	4	157,162,188,101,	0,10728,17824,19293,
#Partially deleted in new
chr4	99564082	99623999	chr4:99564082-99623999	3	+	99574909	99622848	789624	19	155,162,188,144,108,117,140,151,158,169,108,213,212,98,122,228,125,171,1323,	0,10726,17822,19291,25560,27152,27568,30650,32984,36482,37524,42665,44683,47060,47249,48830,54891,56978,58594,
#Partially deleted in new
chr4	99564082	99623223	chr4:99564082-99623223	1	+	99564095	99622848	789624	18	155,188,144,108,117,140,151,158,169,108,213,212,98,122,228,125,171,547,	0,17822,19291,25560,27152,27568,30650,32984,36482,37524,42665,44683,47060,47249,48830,54891,56978,58594,
#Partially deleted in new
chr4	99574706	99623997	chr4:99574706-99623997	1	+	99574909	99622848	789624	18	264,188,144,108,117,140,151,158,169,108,213,212,98,122,228,125,171,1321,	0,7198,8667,14936,16528,16944,20026,22360,25858,26900,32041,34059,36436,36625,38206,44267,46354,47970,
#Partially deleted in new
chr4	99574823	99584193	chr4:99574823-99584193	1	+	99574909	99583580	789624	3	147,188,820,	0,7081,8550,
#Partially deleted in new
chr4	99636528	99654648	chr4:99636528-99654648	3	-	99649266	99654648	789624	2	4668,5418,	0,12702,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	99816832	99870154	chr4:99816832-99870154	1	+	99816913	99866574	789624	10	182,123,134,131,48,63,86,88,62,2038,	0,18790,23456,36385,44745,46177,46937,49201,49724,51284,
#Partially deleted in new
chr4	99816845	99868714	chr4:99816845-99868714	3	+	99816913	99868185	0	9	169,123,134,131,48,63,86,88,598,	0,18777,23443,36372,44732,46164,46924,49188,51271,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	99816849	99864286	chr4:99816849-99864286	0	+	99816849	99816849	8553170	6	165,123,134,48,63,517,	0,18773,23439,44728,46160,46920,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	99844137	99844696	chr4:99844137-99844696	3	+	99844137	99844137	8553170	1	559,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	99864871	99869614	chr4:99864871-99869614	0	+	99864871	99864871	8553170	2	1250,1498,	0,3245,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	99878335	99894490	chr4:99878335-99894490	3	-	99881993	99893963	0	7	3732,64,134,59,35,46,156,	0,5726,7206,8960,13664,15619,15999,
#Partially deleted in new
chr4	99881206	99894376	chr4:99881206-99894376	1	-	99881993	99893963	0	7	861,64,113,59,35,46,42,	0,2855,4335,6089,10793,12748,13128,
#Partially deleted in new
chr4	99881492	99894428	chr4:99881492-99894428	0	-	99881492	99881492	8553170	6	575,64,134,59,35,94,	0,2569,4049,5803,10507,12842,
#Partially deleted in new
chr4	99896247	99946726	chr4:99896247-99946726	3	-	99901027	99946571	789624	8	4905,173,110,95,186,146,172,288,	0,7478,9349,10269,12463,26792,34202,50191,
#Partially deleted in new
chr4	99898759	99930534	chr4:99898759-99930534	0	-	99928556	99930534	789624	10	2393,173,110,95,186,146,56,122,76,85,	0,4966,6837,7757,9951,24280,26000,28957,29782,31690,
#Partially deleted in new
chr4	99899395	99946588	chr4:99899395-99946588	0	-	99923180	99946571	789624	7	1757,173,110,95,186,146,150,	0,4330,6201,7121,9315,23644,47043,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	99899395	99927091	chr4:99899395-99927091	0	-	99899395	99899395	8553170	7	1757,173,110,95,186,146,2332,	0,4330,6201,7121,9315,23644,25364,
#Partially deleted in new
chr4	99900634	99906597	chr4:99900634-99906597	0	-	99906108	99906597	789624	5	518,173,110,116,81,	0,3091,4962,5403,5882,
#Partially deleted in new
chr4	99903777	99946595	chr4:99903777-99946595	0	-	99923180	99946571	789624	7	121,110,95,186,27,146,157,	0,1819,2739,4933,6571,19262,42661,
#Partially deleted in new
chr4	99908728	99946558	chr4:99908728-99946558	0	-	99924790	99946558	789624	5	168,146,56,172,120,	0,14311,16031,21721,37710,
#Partially deleted in new
chr4	99922519	99946560	chr4:99922519-99946560	0	-	99922519	99922519	8553170	3	666,172,122,	0,7930,23919,
#Partially deleted in new
chr4	99923039	99930589	chr4:99923039-99930589	0	-	99923039	99923039	8553170	3	146,122,140,	0,4677,7410,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	99923680	99946574	chr4:99923680-99946574	0	-	99923680	99923680	8553170	4	197,56,172,136,	0,1079,6769,22758,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	99924306	99946586	chr4:99924306-99946586	0	-	99924306	99924306	8553170	2	6315,148,	0,22132,
#Partially deleted in new
chr4	99924790	99946580	chr4:99924790-99946580	1	-	99924790	99946571	789624	3	25,172,142,	0,5659,21648,
#Deleted in new
chr4	99942080	99942522	chr4:99942080-99942522	3	-	99942080	99942080	8553170	1	442,	0,
#Deleted in new
chr4	99948085	99950355	chr4:99948085-99950355	0	-	99948085	99948085	8553170	2	1655,188,	0,2082,
#Deleted in new
chr4	99948087	99950388	chr4:99948087-99950388	3	-	99948461	99950170	0	5	436,130,114,78,221,	0,723,1185,1575,2080,
#Deleted in new
chr4	99948087	99950299	chr4:99948087-99950299	0	-	99948087	99948087	8553170	2	853,1027,	0,1185,
#Deleted in new
chr4	99948119	99950268	chr4:99948119-99950268	0	-	99948119	99948119	8553170	4	404,130,114,606,	0,691,1153,1543,
#Deleted in new
chr4	99948171	99950299	chr4:99948171-99950299	0	-	99948171	99948171	8553170	5	352,130,114,78,52,	0,639,1101,1491,2076,
#Deleted in new
chr4	99948777	99950254	chr4:99948777-99950254	0	-	99948777	99948777	8553170	4	163,107,78,87,	0,495,885,1390,
#Partially deleted in new
chr4	99950005	99966393	chr4:99950005-99966393	1	+	99950005	99950005	8553170	2	223,367,	0,16021,
#Partially deleted in new
chr4	99950489	100037642	chr4:99950489-100037642	1	+	99950489	99950489	8553170	5	191,330,46,87,115,	0,57412,74792,83444,87038,
#Partially deleted in new
chr4	99950522	100037705	chr4:99950522-100037705	0	+	99950522	99950522	789624	4	158,46,87,178,	0,74759,83411,87005,
#Deleted in new
chr4	99990736	99991477	chr4:99990736-99991477	7	-	99990736	99990736	16724991	1	741,	0,
#Deleted in new
chr4	100041840	100042104	chr4:100041840-100042104	7	-	100041840	100041840	16724991	1	264,	0,
#Deleted in new
chr4	100185869	100190468	chr4:100185869-100190468	3	-	100187676	100189983	789624	3	2298,140,166,	0,4023,4433,
#Deleted in new
chr4	100187727	100190304	chr4:100187727-100190304	0	-	100187727	100189983	789624	2	440,412,	0,2165,
#Deleted in new
chr4	100187874	100190782	chr4:100187874-100190782	0	-	100187874	100189983	789624	3	293,140,120,	0,2018,2788,
#Partially deleted in new
chr4	100190032	100215505	chr4:100190032-100215505	3	+	100190032	100190032	789624	5	42,84,97,77,226,	0,2933,3713,3890,25247,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	100395340	100518093	chr4:100395340-100518093	3	-	100410320	100517914	789624	12	3033,74,62,25,96,60,93,39,117,72,123,243,	0,14941,20557,21776,25941,27680,27971,52192,70082,79697,84576,122510,
#Partially deleted in new
chr4	100397463	100518003	chr4:100397463-100518003	1	-	100410320	100517914	789624	9	910,74,62,25,39,117,72,123,153,	0,12818,18434,19653,50069,67959,77574,82453,120387,
#Partially deleted in new
chr4	100397793	100475077	chr4:100397793-100475077	0	-	100410320	100475077	789624	5	580,74,39,117,40,	0,12488,49739,67629,77244,
#Partially deleted in new
chr4	100397869	100518001	chr4:100397869-100518001	1	-	100410320	100517914	789624	11	504,74,62,25,96,60,93,117,72,123,151,	0,12412,18028,19247,23412,25151,25442,67553,77168,82047,119981,
#Partially deleted in new
chr4	100421297	100518002	chr4:100421297-100518002	0	-	100421297	100517914	789624	6	80,39,117,72,123,152,	0,26235,44125,53740,58619,96553,
#Partially deleted in new
chr4	100446019	100518008	chr4:100446019-100518008	0	-	100446019	100446019	8553170	6	228,39,117,72,123,158,	0,1513,19403,29018,33897,71831,
#Partially deleted in new
chr4	100465500	100518001	chr4:100465500-100518001	0	-	100465500	100465500	8553170	5	39,72,123,168,151,	0,9537,14416,21360,52350,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	100473853	100518022	chr4:100473853-100518022	0	-	100473853	100473853	8553170	4	225,72,123,172,	0,1184,6063,43997,
#Partially deleted in new
chr4	100483376	100517998	chr4:100483376-100517998	0	-	100483376	100483376	8553170	2	82,148,	0,34474,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	100660278	100675113	chr4:100660278-100675113	3	-	100660278	100660278	5263520	4	391,114,253,66,	0,5368,13740,14769,
#Partially deleted in new
chr4	100778581	100791235	chr4:100778581-100791235	3	-	100778581	100778581	8553170	2	496,66,	0,12588,
#Deleted in new
chr4	100812254	100814280	chr4:100812254-100814280	3	-	100812254	100812254	8553170	2	414,67,	0,1959,
#Partially deleted in new
chr4	101023408	101347477	chr4:101023408-101347477	1	-	101025864	101346796	0	8	2653,30,98,85,75,126,201,739,	0,5757,8858,17073,37678,39823,172507,323330,
#Partially deleted in new
chr4	101023429	101347480	chr4:101023429-101347480	3	-	101025864	101346796	0	14	2632,30,98,85,75,126,95,78,140,146,112,125,201,742,	0,5736,8837,17052,37657,39802,57102,59756,70346,74937,76181,85524,172486,323309,
#Partially deleted in new
chr4	101023430	101347471	chr4:101023430-101347471	1	-	101025864	101346796	0	12	2631,98,85,75,95,78,140,146,112,125,201,733,	0,8836,17051,37656,57101,59755,70345,74936,76180,85523,172485,323308,
#Partially deleted in new
chr4	101024327	101347327	chr4:101024327-101347327	1	-	101025864	101346796	0	13	1734,98,85,75,126,95,78,140,146,112,125,201,589,	0,7939,16154,36759,38904,56204,58858,69448,74039,75283,84626,171588,322411,
#Partially deleted in new
chr4	101025317	101346842	chr4:101025317-101346842	1	-	101025864	101109043	789624	13	744,30,98,85,75,126,95,78,140,146,112,125,104,	0,3848,6949,15164,35769,37914,55214,57868,68458,73049,74293,83636,321421,
#Partially deleted in new
chr4	101083194	101195928	chr4:101083194-101195928	0	-	101171188	101195928	789624	8	69,140,146,112,88,125,143,13,	0,10581,15172,16416,24879,25759,87889,112721,
#Partially deleted in new
chr4	101093867	101158319	chr4:101093867-101158319	0	-	101093867	101093867	8553170	5	48,146,112,125,150,	0,4499,5743,15086,64302,
#Partially deleted in new
chr4	101098417	101348278	chr4:101098417-101348278	0	-	101098417	101196024	789624	5	95,112,125,201,46,	0,1193,10536,97498,249815,
#Partially deleted in new
chr4	101098462	101347560	chr4:101098462-101347560	0	-	101098462	101196024	789624	5	50,112,125,201,81,	0,1148,10491,97453,249017,
#Deleted in new
chr4	101240794	101240872	chr4:101240794-101240872	3	-	101240794	101240794	5263520	1	78,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	101330301	101330414	chr4:101330301-101330414	3	-	101330301	101330301	5263520	1	113,	0,
#Deleted in new
chr4	101347779	101348883	chr4:101347779-101348883	3	+	101347779	101347779	789624	2	230,560,	0,544,
#Deleted in new
chr4	101347791	101348721	chr4:101347791-101348721	0	+	101347791	101347791	8553170	2	44,398,	0,532,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	101723875	101723980	chr4:101723875-101723980	3	+	101723875	101723875	8553170	1	105,	0,
#Partially deleted in new
chr4	101790606	102074739	chr4:101790606-102074739	3	+	101790880	102073743	789624	17	344,399,155,139,140,106,197,79,309,306,69,179,64,30,56,65,735,	0,39201,64428,71919,79898,104698,127386,230907,234594,239353,253232,269604,272468,280668,281738,283077,283398,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr4	101790606	102074810	chr4:101790606-102074810	1	+	101790880	102073743	789624	16	344,155,139,140,106,197,79,309,306,69,179,64,30,56,65,806,	0,64428,71919,79898,104698,127386,230907,234594,239353,253232,269604,272468,280668,281738,283077,283398,
#Partially deleted in new
chr4	101790729	102073748	chr4:101790729-102073748	1	+	101790880	102073743	789624	15	221,155,139,140,106,197,79,309,306,69,179,64,30,56,65,	0,64305,71796,79775,104575,127263,230784,234471,239230,253109,269481,272345,280545,281615,282954,
#Partially deleted in new
chr4	101813825	102074739	chr4:101813825-102074739	1	+	101829827	102073743	789624	17	113,399,155,139,140,106,197,79,309,306,69,179,64,30,56,65,735,	0,15982,41209,48700,56679,81479,104167,207688,211375,216134,230013,246385,249249,257449,258519,259858,260179,
#Deleted in new
chr4	101972422	101972798	chr4:101972422-101972798	7	+	101972422	101972422	16724991	1	376,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	101976893	102036903	chr4:101976893-102036903	3	-	101976893	101976893	8553170	3	207,174,222,	0,55315,59788,
#Partially deleted in new
chr4	101981862	102030075	chr4:101981862-102030075	0	+	101981862	101981862	8553170	4	82,79,309,116,	0,39651,43338,48097,
#Partially deleted in new
chr4	102061415	102074220	chr4:102061415-102074220	0	+	102061415	102061415	8553170	5	1723,30,56,65,216,	0,9859,10929,12268,12589,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	102251040	102345205	chr4:102251040-102345205	3	-	102253421	102344662	789624	11	2390,60,33,185,208,165,123,170,163,472,63,	0,8414,12120,16449,16831,53276,53948,56395,64627,93403,94102,
#Partially deleted in new
chr4	102261665	102345474	chr4:102261665-102345474	1	-	102263043	102344662	789624	9	1528,185,208,165,123,170,163,472,130,	0,5824,6206,42651,43323,45770,54002,82778,83679,
#Partially deleted in new
chr4	102261665	102345139	chr4:102261665-102345139	1	-	102263043	102344662	789624	8	1528,185,208,165,123,170,163,696,	0,5824,6206,42651,43323,45770,54002,82778,
#Partially deleted in new
chr4	102269715	102304488	chr4:102269715-102304488	0	-	102269715	102269715	8553170	2	79,172,	0,34601,
#Partially deleted in new
chr4	102304406	102353000	chr4:102304406-102353000	0	-	102304406	102304406	8553170	5	75,123,170,163,147,	0,582,3029,11261,48447,
#Partially deleted in new
chr4	102304447	102345437	chr4:102304447-102345437	0	-	102304447	102304447	8553170	4	34,123,163,93,	0,541,11220,40897,
#Partially deleted in new
chr4	102305024	102345482	chr4:102305024-102345482	0	-	102305024	102305024	8553170	4	87,170,163,138,	0,2411,10643,40320,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	102307556	102431258	chr4:102307556-102431258	0	-	102307556	102307556	8553170	4	49,163,161,197,	0,8111,77793,123505,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	102348391	102348691	chr4:102348391-102348691	3	-	102348391	102348391	8553170	1	300,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	102418601	102431249	chr4:102418601-102431249	0	-	102418601	102418601	8553170	3	387,98,188,	0,1095,12460,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	102418601	102431282	chr4:102418601-102431282	0	-	102418601	102418601	8553170	2	387,221,	0,12460,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	102418807	102431290	chr4:102418807-102431290	1	-	102418807	102418807	8553170	4	181,98,102,229,	0,889,11589,12254,
#Deleted in new
chr4	102461249	102462152	chr4:102461249-102462152	7	+	102461249	102461249	16724991	1	903,	0,
#Deleted in new
chr4	102500840	102501319	chr4:102500840-102501319	3	-	102500840	102500840	8553170	1	479,	0,
#Partially deleted in new
chr4	102501328	102617302	chr4:102501328-102617302	3	+	102525518	102616594	0	24	460,46,79,41,99,149,164,159,105,92,139,144,90,195,142,115,202,170,103,125,67,173,157,869,	0,24183,28507,32516,36529,65658,75547,77552,79206,81537,83353,92096,93563,94809,96191,99566,105167,105821,106320,109246,110715,111105,112096,115105,
#Partially deleted in new
chr4	102501330	102616915	chr4:102501330-102616915	1	+	102525518	102616594	0	24	458,46,79,38,99,149,164,159,105,92,139,144,90,195,142,115,202,170,103,125,67,173,157,482,	0,24181,28505,32517,36527,65656,75545,77550,79204,81535,83351,92094,93561,94807,96189,99564,105165,105819,106318,109244,110713,111103,112094,115103,
#Partially deleted in new
chr4	102501454	102537899	chr4:102501454-102537899	0	+	102510932	102537899	789624	6	334,70,46,79,38,42,	0,9425,24057,28381,32393,36403,
#Partially deleted in new
chr4	102501471	102577039	chr4:102501471-102577039	0	+	102510932	102577039	789624	8	317,70,46,79,41,99,149,164,	0,9408,24040,28364,32373,36386,65515,75404,
#Partially deleted in new
chr4	102501897	102617117	chr4:102501897-102617117	1	+	102525518	102616594	0	24	270,46,79,38,99,149,164,159,105,92,139,144,90,195,142,115,202,170,103,125,67,173,157,684,	0,23614,27938,31950,35960,65089,74978,76983,78637,80968,82784,91527,92994,94240,95622,98997,104598,105252,105751,108677,110146,110536,111527,114536,
#Partially deleted in new
chr4	102503374	102576902	chr4:102503374-102576902	0	+	102525518	102576902	789624	7	116,46,79,41,99,149,27,	0,22137,26461,30470,34483,63612,73501,
#Partially deleted in new
chr4	102537586	102579038	chr4:102537586-102579038	0	+	102537586	102537586	8553170	5	42,99,149,164,158,	0,271,29400,39289,41294,
#Partially deleted in new
chr4	102537598	102567084	chr4:102537598-102567084	0	+	102537598	102537598	8553170	2	358,98,	0,29388,
#Partially deleted in new
chr4	102557104	102580588	chr4:102557104-102580588	0	+	102557104	102557104	8553170	5	102,149,164,159,54,	0,9882,19771,21776,23430,
#Partially deleted in new
chr4	102577713	102617098	chr4:102577713-102617098	1	+	102578852	102616594	0	17	1326,105,92,139,144,90,195,142,115,202,170,103,125,67,173,157,665,	0,2821,5152,6968,15711,17178,18424,19806,23181,28782,29436,29935,32861,34330,34720,35711,38720,
#Partially deleted in new
chr4	102577863	102593568	chr4:102577863-102593568	0	+	102578930	102593568	789624	6	112,159,105,92,139,144,	0,1017,2671,5002,6818,15561,
#Deleted in new
chr4	102593248	102596307	chr4:102593248-102596307	0	+	102593248	102593248	8553170	3	320,90,170,	0,1643,2889,
#Partially deleted in new
chr4	102630769	102760982	chr4:102630769-102760982	1	-	102632258	102760894	789624	18	1512,223,258,143,145,165,219,168,87,118,152,111,176,124,171,106,95,265,	0,2481,4018,5095,8943,19767,26912,33915,38193,40511,43149,58804,59826,83668,92101,93092,95819,129948,
#Partially deleted in new
chr4	102631435	102760994	chr4:102631435-102760994	3	-	102632056	102760894	789624	17	846,258,143,145,165,219,168,87,118,152,111,176,124,171,106,95,277,	0,3352,4429,8277,19101,26246,33249,37527,39845,42483,58138,59160,83002,91435,92426,95153,129282,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr4	102631487	102760941	chr4:102631487-102760941	0	-	102631487	102631487	8553170	17	794,258,143,145,165,219,4365,118,152,111,176,78,124,171,106,95,224,	0,3300,4377,8225,19049,26194,33197,39793,42431,58086,59108,59392,82950,91383,92374,95101,129230,
#Partially deleted in new
chr4	102631494	102760952	chr4:102631494-102760952	0	-	102670999	102760894	789624	18	787,258,143,145,165,219,168,87,96,118,152,111,176,124,171,106,95,235,	0,3293,4370,8218,19042,26187,33190,37468,39421,39786,42424,58079,59101,82943,91376,92367,95094,129223,
#Partially deleted in new
chr4	102631495	102760949	chr4:102631495-102760949	1	-	102632056	102760894	789624	17	786,258,143,145,165,219,168,87,118,152,111,176,124,171,106,95,232,	0,3292,4369,8217,19041,26186,33189,37467,39785,42423,58078,59100,82942,91375,92366,95093,129222,
#Partially deleted in new
chr4	102631545	102760992	chr4:102631545-102760992	0	-	102658983	102760894	789624	18	736,258,143,145,165,219,170,168,87,118,152,111,176,124,171,106,95,275,	0,3242,4319,8167,18991,26136,27313,33139,37417,39735,42373,58028,59050,82892,91325,92316,95043,129172,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr4	102631548	102760972	chr4:102631548-102760972	0	-	102682744	102760894	789624	19	733,258,143,145,165,219,168,87,118,152,47,171,111,176,124,171,106,95,255,	0,3239,4316,8164,18988,26133,33136,37414,39732,42370,49989,51163,58025,59047,82889,91322,92313,95040,129169,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr4	102631562	102723921	chr4:102631562-102723921	0	-	102679703	102723921	789624	18	719,258,143,145,165,219,168,212,87,96,118,152,99,111,176,124,171,60,	0,3225,4302,8150,18974,26119,33122,36257,37400,39353,39718,42356,48048,58011,59033,82875,91308,92299,
#Partially deleted in new
chr4	102631581	102760983	chr4:102631581-102760983	1	-	102632056	102760894	789624	18	700,258,143,145,165,219,168,87,118,138,152,111,176,124,171,106,95,266,	0,3206,4283,8131,18955,26100,33103,37381,39699,40427,42337,57992,59014,82856,91289,92280,95007,129136,
#Partially deleted in new
chr4	102631588	102722925	chr4:102631588-102722925	0	-	102671981	102722925	789624	15	693,258,143,145,165,219,168,87,118,162,152,111,176,124,55,	0,3199,4276,8124,18948,26093,33096,37374,39692,40304,42330,57985,59007,82849,91282,
#Partially deleted in new
chr4	102631748	102760952	chr4:102631748-102760952	0	-	102671362	102760894	789624	19	533,258,143,145,165,219,170,168,87,118,46,152,111,176,124,171,106,95,235,	0,3039,4116,7964,18788,25933,27110,32936,37214,39532,40260,42170,57825,58847,82689,91122,92113,94840,128969,
#Partially deleted in new
chr4	102631987	102760933	chr4:102631987-102760933	1	-	102632056	102760894	789624	16	294,258,143,145,165,219,168,87,118,152,111,176,124,106,95,216,	0,2800,3877,7725,18549,25694,32697,36975,39293,41931,57586,58608,82450,91874,94601,128730,
#Partially deleted in new
chr4	102635905	102650838	chr4:102635905-102650838	0	-	102635905	102635905	8553170	3	102,145,302,	0,3807,14631,
#Deleted in new
chr4	102662610	102663073	chr4:102662610-102663073	7	+	102662610	102662610	16724991	1	463,	0,
#Partially deleted in new
chr4	102714437	102728606	chr4:102714437-102728606	0	-	102714437	102727369	789624	5	124,171,106,95,1339,	0,8433,9424,12151,12830,
#Deleted in new
chr4	102722372	102723884	chr4:102722372-102723884	0	-	102722372	102722372	8553170	2	669,23,	0,1489,
#Partially deleted in new
chr4	102722962	102760934	chr4:102722962-102760934	0	-	102734559	102760894	789624	4	79,106,189,217,	0,899,11420,37755,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	102723873	102760983	chr4:102723873-102760983	0	-	102753965	102760894	789624	4	94,95,173,266,	0,2715,29949,36844,
#Deleted in new
chr4	102727273	102730721	chr4:102727273-102730721	7	-	102727273	102727273	16724991	2	1138,217,	0,3231,
#Deleted in new
chr4	102728745	102730171	chr4:102728745-102730171	7	-	102728745	102728745	16724991	1	1426,	0,
#Deleted in new
chr4	102734357	102734612	chr4:102734357-102734612	7	+	102734357	102734357	16724991	1	255,	0,
#Deleted in new
chr4	102751400	102752641	chr4:102751400-102752641	7	+	102751400	102751400	16724991	1	1241,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	102753690	102760994	chr4:102753690-102760994	0	-	102753690	102753690	8553170	2	305,277,	0,7027,
#Partially deleted in new
chr4	102794382	102827812	chr4:102794382-102827812	1	-	102797414	102826508	0	8	3078,94,106,78,32,64,152,386,	0,5024,7071,8178,15289,15409,32102,33044,
#Partially deleted in new
chr4	102794385	102827948	chr4:102794385-102827948	1	-	102797414	102826508	0	8	3075,94,106,78,32,64,360,357,	0,5021,7068,8175,15286,15406,32099,33206,
#Partially deleted in new
chr4	102794389	102810396	chr4:102794389-102810396	1	-	102797414	102810396	789624	7	3071,94,106,78,32,64,27,	0,5017,7064,8171,15282,15402,15980,
#Partially deleted in new
chr4	102795975	102827948	chr4:102795975-102827948	1	-	102797414	102826508	0	8	1485,94,106,78,32,64,152,357,	0,3431,5478,6585,13696,13816,30509,31616,
#Partially deleted in new
chr4	102795975	102828159	chr4:102795975-102828159	1	-	102797414	102826508	0	8	1485,94,106,78,32,64,152,216,	0,3431,5478,6585,13696,13816,30509,31968,
#Partially deleted in new
chr4	102796133	102827122	chr4:102796133-102827122	3	-	102798928	102826508	0	8	1327,50,94,106,78,32,64,638,	0,2794,3273,5320,6427,13538,13658,30351,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	102796133	102812973	chr4:102796133-102812973	0	-	102796133	102796133	8553170	6	1327,94,106,78,32,3182,	0,3273,5320,6427,13538,13658,
#Partially deleted in new
chr4	102797150	102827566	chr4:102797150-102827566	0	-	102797150	102797150	8553170	7	310,94,1185,32,64,152,140,	0,2256,4303,12521,12641,29334,30276,
#Partially deleted in new
chr4	102797234	102827553	chr4:102797234-102827553	1	-	102797414	102826508	0	8	226,94,106,78,32,64,360,127,	0,2172,4219,5326,12437,12557,29250,30192,
#Partially deleted in new
chr4	102797246	102825860	chr4:102797246-102825860	1	-	102797414	102825743	789624	7	214,94,106,78,32,64,123,	0,2160,4207,5314,12425,12545,28491,
#Partially deleted in new
chr4	102797251	102868875	chr4:102797251-102868875	1	-	102797414	102826508	0	8	209,94,106,78,32,64,152,161,	0,2155,4202,5309,12420,12540,29233,71463,
#Partially deleted in new
chr4	102797263	102827849	chr4:102797263-102827849	1	-	102797414	102826508	0	8	197,94,106,78,32,64,152,115,	0,2143,4190,5297,12408,12528,29221,30471,
#Partially deleted in new
chr4	102797321	102825542	chr4:102797321-102825542	1	-	102797414	102809792	789624	7	139,94,106,78,32,64,65,	0,2085,4132,5239,12350,12470,28156,
#Deleted in new
chr4	102797354	102802694	chr4:102797354-102802694	0	-	102797354	102797354	8553170	4	106,94,106,134,	0,2052,4099,5206,
#Partially deleted in new
chr4	102797356	102868896	chr4:102797356-102868896	1	-	102797414	102868744	0	7	104,94,106,78,32,64,182,	0,2050,4097,5204,12315,12435,71358,
#Partially deleted in new
chr4	102797366	102825780	chr4:102797366-102825780	1	-	102797414	102809792	789624	7	94,94,106,78,32,64,59,	0,2040,4087,5194,12305,12425,28355,
#Partially deleted in new
chr4	102797384	102825785	chr4:102797384-102825785	1	-	102797414	102809792	789624	8	76,94,106,78,32,64,79,48,	0,2022,4069,5176,12287,12407,27854,28353,
#Partially deleted in new
chr4	102797398	102825780	chr4:102797398-102825780	1	-	102797414	102809792	789624	8	62,94,106,78,32,64,79,59,	0,2008,4055,5162,12273,12393,27840,28323,
#Partially deleted in new
chr4	102797402	102825540	chr4:102797402-102825540	0	-	102809132	102809792	789624	8	58,94,106,78,92,32,64,63,	0,2004,4051,5158,11665,12269,12389,28075,
#Partially deleted in new
chr4	102799406	102827551	chr4:102799406-102827551	0	-	102809132	102826508	789624	8	94,106,78,92,32,64,152,125,	0,2047,3154,9661,10265,10385,27078,28020,
#Partially deleted in new
chr4	102799466	102827522	chr4:102799466-102827522	0	-	102809703	102826508	789624	7	34,106,78,52,64,152,96,	0,1987,3094,10205,10325,27018,27960,
#Partially deleted in new
chr4	102801453	102825559	chr4:102801453-102825559	0	-	102801453	102809792	789624	5	106,78,32,64,321,	0,1107,8218,8338,23785,
#Partially deleted in new
chr4	102801456	102826867	chr4:102801456-102826867	0	-	102809703	102826508	789624	5	103,78,52,64,383,	0,1104,8215,8335,25028,
#Partially deleted in new
chr4	102801468	102868861	chr4:102801468-102868861	0	-	102801468	102826508	789624	6	91,78,32,64,135,147,	0,1092,8203,8323,25016,67246,
#Partially deleted in new
chr4	102801472	102828031	chr4:102801472-102828031	0	-	102809132	102826508	789624	7	87,78,92,32,64,152,88,	0,1088,7595,8199,8319,25012,26471,
#Partially deleted in new
chr4	102801508	102827500	chr4:102801508-102827500	0	-	102809136	102826508	789624	7	51,78,117,32,64,152,74,	0,1052,7559,8163,8283,24976,25918,
#Partially deleted in new
chr4	102801522	102828029	chr4:102801522-102828029	0	-	102801522	102826508	789624	7	37,78,32,64,152,150,86,	0,1038,8149,8269,24962,26069,26421,
#Partially deleted in new
chr4	102802348	102809953	chr4:102802348-102809953	0	-	102802348	102802348	8553170	3	290,32,162,	0,7323,7443,
#Partially deleted in new
chr4	102802369	102828010	chr4:102802369-102828010	0	-	102802369	102802369	8553170	5	269,32,64,152,67,	0,7302,7422,24115,25574,
#Partially deleted in new
chr4	102802560	102827835	chr4:102802560-102827835	0	-	102809132	102826508	789624	6	78,92,32,64,152,244,	0,6507,7111,7231,23924,25031,
#Partially deleted in new
chr4	102802611	102828064	chr4:102802611-102828064	0	-	102802611	102826508	789624	5	27,32,64,360,121,	0,7060,7180,23873,25332,
#Partially deleted in new
chr4	102809079	102827010	chr4:102809079-102827010	0	-	102809079	102809079	8553170	4	80,32,64,526,	0,592,712,17405,
#Partially deleted in new
chr4	102809429	102827520	chr4:102809429-102827520	0	-	102809429	102809429	8553170	4	274,64,152,94,	0,362,17055,17997,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	102828054	102844075	chr4:102828054-102844075	3	+	102828054	102828054	789624	2	131,752,	0,15269,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	102837046	102837099	chr4:102837046-102837099	3	-	102837046	102837046	8553170	1	53,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	102868977	102892807	chr4:102868977-102892807	3	+	102869084	102887430	0	3	210,215,5467,	0,16238,18363,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	102868991	102888572	chr4:102868991-102888572	1	+	102869084	102887430	8553170	3	196,215,1232,	0,16224,18349,
#Partially deleted in new
chr4	102869335	102887756	chr4:102869335-102887756	1	+	102869379	102887430	789624	3	177,215,416,	0,15880,18005,
#Partially deleted in new
chr4	102885047	103019719	chr4:102885047-103019719	1	-	102885232	102991711	789624	12	281,137,109,150,107,176,128,143,171,142,70,121,	0,20466,21488,25391,26383,47076,60145,61599,64209,104752,106595,134551,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	102885048	103019650	chr4:102885048-103019650	0	-	102932288	102991711	789624	11	241,93,137,109,150,107,122,176,142,70,52,	0,5532,20465,21487,25390,26382,26959,47075,104751,106594,134550,
#Partially deleted in new
chr4	102885048	103019661	chr4:102885048-103019661	0	-	102932221	102991711	789624	11	280,137,109,150,107,176,143,171,142,70,63,	0,20465,21487,25390,26382,47075,61598,64208,104751,106594,134550,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	102896724	102898237	chr4:102896724-102898237	7	+	102896724	102896724	16724991	1	1513,	0,
#Partially deleted in new
chr4	102900927	103019739	chr4:102900927-103019739	3	-	102901116	102991711	789624	12	405,137,109,150,107,176,128,143,171,142,70,141,	0,4586,5608,9511,10503,31196,44265,45719,48329,88872,90715,118671,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	102901087	103019666	chr4:102901087-103019666	0	-	102932221	102991711	789624	9	245,137,109,150,107,122,176,70,68,	0,4426,5448,9351,10343,10920,31036,90555,118511,
#Partially deleted in new
chr4	102901096	102910484	chr4:102901096-102910484	0	-	102901096	102901096	8553170	3	236,109,46,	0,5439,9342,
#Partially deleted in new
chr4	102901102	102932299	chr4:102901102-102932299	0	-	102901102	102901102	8553170	2	230,176,	0,31021,
#Partially deleted in new
chr4	102906276	102911541	chr4:102906276-102911541	0	-	102906521	102911541	789624	3	368,150,111,	0,4162,5154,
#Partially deleted in new
chr4	102910433	102991712	chr4:102910433-102991712	0	-	102932288	102991711	789624	5	155,107,176,142,70,	0,997,21690,79366,81209,
#Partially deleted in new
chr4	102911433	102991712	chr4:102911433-102991712	0	-	102911433	102991711	789624	6	104,176,128,143,142,70,	0,20690,33759,35213,78366,80209,
#Deleted in new
chr4	102961955	102963327	chr4:102961955-102963327	7	+	102961955	102961955	16724991	2	43,1201,	0,171,
#Partially deleted in new
chr4	103019867	103076303	chr4:103019867-103076303	3	-	103026369	103067550	789624	13	522,224,137,109,150,107,176,128,143,171,181,132,120,	0,6500,8879,11832,23428,25022,27183,29025,30372,37933,46459,47593,56316,
#Partially deleted in new
chr4	103020229	103057942	chr4:103020229-103057942	0	-	103020279	103057942	789624	8	160,109,150,107,176,128,143,142,	0,11470,23066,24660,26821,28663,30010,37571,
#Partially deleted in new
chr4	103025489	103076773	chr4:103025489-103076773	1	-	103026369	103067550	789624	12	1102,137,109,150,107,176,128,143,171,181,132,590,	0,3257,6210,17806,19400,21561,23403,24750,32311,40837,41971,50694,
#Partially deleted in new
chr4	103025955	103076332	chr4:103025955-103076332	1	-	103026421	103067550	789624	10	636,109,150,107,176,128,143,181,132,149,	0,5744,17340,18934,21095,22937,24284,40371,41505,50228,
#Partially deleted in new
chr4	103026163	103077282	chr4:103026163-103077282	1	-	103026369	103067550	789624	11	428,137,109,150,107,176,128,143,181,132,135,	0,2583,5536,17132,18726,20887,22729,24076,40163,41297,50984,
#Partially deleted in new
chr4	103042044	103044991	chr4:103042044-103044991	0	-	103042044	103042044	8553170	3	347,150,102,	0,1251,2845,
#Partially deleted in new
chr4	103048590	103067499	chr4:103048590-103067499	0	-	103048590	103048590	8553170	4	430,143,181,39,	0,1649,17736,18870,
#Partially deleted in new
chr4	103057813	103077324	chr4:103057813-103077324	0	-	103057813	103067550	789624	4	158,181,132,177,	0,8513,9647,19334,
#Partially deleted in new
chr4	103065410	103076336	chr4:103065410-103076336	0	-	103065410	103065410	8553170	4	358,181,132,153,	0,916,2050,10773,
#Partially deleted in new
chr4	103066458	103085829	chr4:103066458-103085829	0	-	103067559	103085738	789624	6	49,132,93,59,114,131,	0,1002,15622,16412,18890,19240,
#Deleted in new
chr4	103076426	103077202	chr4:103076426-103077202	0	-	103076426	103076426	8553170	2	492,55,	0,721,
#Partially deleted in new
chr4	103079434	103099883	chr4:103079434-103099883	3	-	103079701	103096254	0	10	321,93,59,114,61,109,97,79,92,101,	0,2646,3436,5914,7045,11742,13165,15768,16748,20348,
#Partially deleted in new
chr4	103079476	103099828	chr4:103079476-103099828	0	-	103079476	103079476	8553170	9	279,93,59,1192,109,97,79,92,46,	0,2604,3394,5872,11700,13123,15726,16706,20306,
#Partially deleted in new
chr4	103079478	103099808	chr4:103079478-103099808	0	-	103079478	103079478	8553170	10	277,93,59,1192,109,97,79,92,757,26,	0,2602,3392,5870,11698,13121,15724,16704,19165,20304,
#Partially deleted in new
chr4	103079532	103099816	chr4:103079532-103099816	0	-	103079532	103079532	8553170	10	223,93,59,114,842,109,97,79,92,34,	0,2548,3338,5816,6166,11644,13067,15670,16650,20250,
#Partially deleted in new
chr4	103086477	103099870	chr4:103086477-103099870	0	-	103092674	103096254	789624	6	63,109,119,79,92,88,	0,4699,6122,8725,9705,13305,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	103086500	103099829	chr4:103086500-103099829	0	-	103091712	103096254	789624	7	40,109,118,97,79,92,47,	0,4676,5119,6099,8702,9682,13282,
#Partially deleted in new
chr4	103086505	103099829	chr4:103086505-103099829	0	-	103086505	103096254	789624	7	35,109,97,79,92,119,47,	0,4671,6094,8697,9677,11130,13277,
#Partially deleted in new
chr4	103091184	103099870	chr4:103091184-103099870	0	-	103091184	103096254	789624	6	101,97,79,92,159,88,	0,1415,4018,4998,7459,8598,
#Partially deleted in new
chr4	103092375	103099862	chr4:103092375-103099862	0	-	103092375	103092375	8553170	4	321,79,92,80,	0,2827,3807,7407,
#Partially deleted in new
chr4	103105805	103198409	chr4:103105805-103198409	3	-	103106221	103198319	0	49	511,287,184,98,113,186,219,204,198,219,99,291,159,291,159,159,288,285,159,279,291,156,291,159,204,159,273,315,155,166,123,120,75,168,89,148,159,120,130,88,52,66,68,82,120,119,90,92,146,	0,2997,5022,8649,10771,14342,17065,26887,27889,30335,32545,33983,34450,35008,35944,37442,38525,39244,39717,40023,41550,43038,43312,45413,47241,52494,52808,53204,54819,55280,55529,57331,57673,68930,70154,71093,74505,75531,76956,77395,80004,88423,88568,88797,89308,90114,90357,90953,92458,
#Partially deleted in new
chr4	103105812	103198408	chr4:103105812-103198408	1	-	103106221	103198319	0	47	504,287,184,98,113,186,219,204,198,219,102,159,291,159,159,288,285,159,279,291,156,291,159,204,159,273,315,155,166,123,120,168,89,148,159,120,130,88,52,66,68,82,120,119,90,92,145,	0,2990,5015,8642,10764,14335,17058,26880,27882,30328,32538,34443,35001,35937,37435,38518,39237,39710,40016,41543,43031,43305,45406,47234,52487,52801,53197,54812,55273,55522,57324,68923,70147,71086,74498,75524,76949,77388,79997,88416,88561,88790,89301,90107,90350,90946,92451,
#Partially deleted in new
chr4	103106046	103198409	chr4:103106046-103198409	1	-	103106221	103198319	789624	53	270,287,184,98,113,186,219,204,198,31,80,99,153,9,9,117,159,291,159,159,288,285,159,279,291,156,291,159,204,159,273,315,155,166,123,120,75,168,89,148,159,120,130,88,52,66,68,82,120,119,90,92,146,	0,2756,4781,8408,10530,14101,16824,26646,27648,30094,30233,32304,33742,33896,33906,33916,34209,34767,35703,37201,38284,39003,39476,39782,41309,42797,43071,45172,47000,52253,52567,52963,54578,55039,55288,57090,57432,68689,69913,70852,74264,75290,76715,77154,79763,88182,88327,88556,89067,89873,90116,90712,92217,
#Partially deleted in new
chr4	103116363	103120336	chr4:103116363-103120336	0	-	103116363	103116363	8553170	2	326,189,	0,3784,
#Deleted in new
chr4	103145302	103145781	chr4:103145302-103145781	0	-	103145302	103145302	8553170	2	32,259,	0,220,
#Partially deleted in new
chr4	103151235	103198408	chr4:103151235-103198408	0	-	103151235	103198319	789624	26	142,204,159,273,315,155,166,123,120,75,168,89,148,159,120,130,88,52,66,68,82,120,119,90,92,145,	0,1811,7064,7378,7774,9389,9850,10099,11901,12243,23500,24724,25663,29075,30101,31526,31965,34574,42993,43138,43367,43878,44684,44927,45523,47028,
#Deleted in new
chr4	103180304	103181963	chr4:103180304-103181963	0	-	103180304	103180304	8553170	2	165,627,	0,1032,
#Deleted in new
chr4	103194250	103198349	chr4:103194250-103198349	0	-	103194250	103198319	789624	7	44,68,82,119,90,92,86,	0,123,352,1669,1912,2508,4013,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	103256158	103453658	chr4:103256158-103453658	3	+	103256158	103256158	8553170	4	136,131,112,59,	0,168896,180776,197441,
#Partially deleted in new
chr4	103377002	103439741	chr4:103377002-103439741	1	+	103377002	103377002	8553170	4	173,112,125,117,	0,59932,60715,62622,
#Partially deleted in new
chr4	103425041	103439728	chr4:103425041-103439728	0	+	103425041	103425041	789624	4	144,112,57,104,	0,11893,13665,14583,
#Partially deleted in new
chr4	103548744	103624534	chr4:103548744-103624534	3	+	103548744	103548744	8553170	5	123,66,237,145,254,	0,3792,42462,44543,75536,
#Partially deleted in new
chr4	103548744	103593417	chr4:103548744-103593417	0	+	103548744	103548744	8553170	5	123,66,102,237,130,	0,3792,20556,42462,44543,
#Deleted in new
chr4	103572088	103574082	chr4:103572088-103574082	7	+	103572088	103572088	16724991	1	1994,	0,
#Partially deleted in new
chr4	103586030	103719816	chr4:103586030-103719816	3	-	103589681	103719675	789624	5	3964,197,151,189,689,	0,5456,70163,72184,133097,
#Deleted in new
chr4	103924539	103924641	chr4:103924539-103924641	3	+	103924539	103924539	8553170	1	102,	0,
#Partially deleted in new
chr4	104230379	104411035	chr4:104230379-104411035	3	+	104230379	104230379	8553170	6	113,49,88,113,53,151,	0,3856,101843,164162,165782,180505,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	104233776	104336033	chr4:104233776-104336033	1	+	104233776	104233776	8553170	4	56,49,88,323,	0,97625,98446,101934,
#Partially deleted in new
chr4	104468311	104494894	chr4:104468311-104494894	3	-	104472321	104491802	789624	3	4055,1316,194,	0,22432,26389,
#Partially deleted in new
chr4	104469513	104494901	chr4:104469513-104494901	0	-	104469513	104469513	789624	3	2853,76,201,	0,24992,25187,
#Deleted in new
chr4	104472174	104475258	chr4:104472174-104475258	0	-	104472174	104472174	8553170	2	192,171,	0,2913,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	104490964	104697592	chr4:104490964-104697592	3	+	104490964	104490964	789624	10	96,129,82,37,122,157,110,134,99,2002,	0,152046,152356,155934,168120,170456,181674,185088,193536,204626,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	104653873	104966793	chr4:104653873-104966793	3	-	104653873	104653873	8553170	6	48,120,41,118,62,186,	0,13023,92766,274121,312146,312734,
#Deleted in new
chr4	104886117	104886955	chr4:104886117-104886955	7	-	104886117	104886117	16724991	1	838,	0,
#Partially deleted in new
chr4	104907356	105116845	chr4:104907356-105116845	0	+	104907356	104907356	8553170	4	104,103,248,17,	0,61888,153870,209472,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	104907405	104970084	chr4:104907405-104970084	1	+	104907405	104907405	8553170	4	55,122,103,168,	0,36118,61839,62511,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	104973711	105120000	chr4:104973711-105120000	3	+	104973711	104973711	8553170	4	71,248,90,132,	0,87515,143117,146157,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	104974671	104974771	chr4:104974671-104974771	3	+	104974671	104974671	8553170	1	100,	0,
#Deleted in new
chr4	104996899	104997052	chr4:104996899-104997052	7	-	104996899	104996899	16724991	1	153,	0,
#Partially deleted in new
chr4	105102890	105104004	chr4:105102890-105104004	7	-	105102890	105102890	16724991	1	1114,	0,
#Deleted in new
chr4	105105986	105106094	chr4:105105986-105106094	3	+	105105986	105105986	8553170	1	108,	0,
#Deleted in new
chr4	105137279	105140619	chr4:105137279-105140619	3	-	105137279	105137279	8553170	2	439,110,	0,3230,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	105145874	105242771	chr4:105145874-105242771	1	+	105233942	105237440	0	3	212,146,8875,	0,44485,88022,
#Partially deleted in new
chr4	105146292	105279816	chr4:105146292-105279816	1	+	105190469	105276519	789624	11	687,127,3455,91,94,209,151,90,138,355,4769,	0,44067,87604,95046,96541,97277,113326,115466,123317,126271,128755,
#Partially deleted in new
chr4	105146292	105279816	chr4:105146292-105279816	3	+	105233942	105276519	0	11	687,127,3455,91,94,209,151,90,138,355,4769,	0,44067,87604,95046,96541,97277,113326,115466,123317,126271,128755,
#Partially deleted in new
chr4	105146785	105279803	chr4:105146785-105279803	0	+	105233942	105243651	0	10	194,146,3455,94,209,151,90,138,355,4756,	0,43574,87111,96048,96784,112833,114973,122824,125778,128262,
#Partially deleted in new
chr4	105146785	105279803	chr4:105146785-105279803	1	+	105233942	105276519	0	11	194,146,3455,91,94,209,151,90,138,355,4756,	0,43574,87111,94553,96048,96784,112833,114973,122824,125778,128262,
#Partially deleted in new
chr4	105146877	105202546	chr4:105146877-105202546	0	+	105146877	105146877	8553170	3	102,146,207,	0,43482,55462,
#Partially deleted in new
chr4	105146885	105242762	chr4:105146885-105242762	1	+	105233942	105241433	789624	3	94,3455,1424,	0,87011,94453,
#Partially deleted in new
chr4	105146932	105190703	chr4:105146932-105190703	0	+	105146932	105146932	8553170	2	47,344,	0,43427,
#Partially deleted in new
chr4	105147456	105234272	chr4:105147456-105234272	0	+	105233942	105234272	789624	3	343,146,376,	0,42903,86440,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	105293663	105293946	chr4:105293663-105293946	3	+	105293663	105293663	8553170	1	283,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	105369076	105474081	chr4:105369076-105474081	3	-	105369724	105474050	789624	12	677,37,70,86,128,127,87,120,54,45,65,188,	0,1760,17490,27172,29960,55119,68873,77306,80273,84521,87604,104817,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	105369242	105474064	chr4:105369242-105474064	1	-	105369724	105474050	789624	11	511,37,70,86,128,127,120,54,45,65,171,	0,1594,17324,27006,29794,54953,77140,80107,84355,87438,104651,
#Partially deleted in new
chr4	105369560	105474014	chr4:105369560-105474014	0	-	105453623	105473957	789624	13	193,37,70,86,128,127,87,120,54,45,44,65,121,	0,1276,17006,26688,29476,54635,68389,76822,79789,84037,86687,87120,104333,
#Partially deleted in new
chr4	105369564	105474067	chr4:105369564-105474067	0	-	105449392	105474050	789624	10	189,37,70,86,128,127,87,120,54,174,	0,1272,17002,26684,29472,54631,68385,76818,79785,104329,
#Partially deleted in new
chr4	105369564	105474050	chr4:105369564-105474050	1	-	105369724	105474050	789624	6	189,37,70,86,128,157,	0,1272,17002,26684,29472,104329,
#Partially deleted in new
chr4	105369564	105474050	chr4:105369564-105474050	1	-	105369724	105474050	789624	8	189,37,70,86,128,127,65,157,	0,1272,17002,26684,29472,54631,87116,104329,
#Partially deleted in new
chr4	105369564	105399636	chr4:105369564-105399636	0	-	105369564	105369564	8553170	5	189,37,70,86,600,	0,1272,17002,26684,29472,
#Partially deleted in new
chr4	105369564	105449371	chr4:105369564-105449371	0	-	105369724	105449371	789624	4	189,37,120,22,	0,1272,76818,79785,
#Partially deleted in new
chr4	105386612	105453908	chr4:105386612-105453908	0	-	105386612	105386612	8553170	7	24,86,128,120,54,45,128,	0,9636,12424,59770,62737,66985,67168,
#Partially deleted in new
chr4	105396325	105474059	chr4:105396325-105474059	0	-	105396325	105474050	789624	6	9,128,127,87,65,166,	0,2711,27870,41624,60355,77568,
#Partially deleted in new
chr4	105398303	105474059	chr4:105398303-105474059	0	-	105398303	105398303	8553170	9	564,128,127,87,120,54,45,65,166,	0,733,25892,39646,48079,51046,55294,58377,75590,
#Partially deleted in new
chr4	105399078	105474040	chr4:105399078-105474040	0	-	105399078	105474040	789624	7	86,127,87,120,45,65,147,	0,25117,38871,47304,54519,57602,74815,
#Partially deleted in new
chr4	105399150	105474059	chr4:105399150-105474059	0	-	105449392	105474050	789624	5	14,127,120,54,166,	0,25045,47232,50199,74743,
#Partially deleted in new
chr4	105405636	105473987	chr4:105405636-105473987	0	-	105453607	105473987	789624	7	312,127,87,120,54,45,94,	0,18559,32313,40746,43713,47961,68257,
#Partially deleted in new
chr4	105405837	105474062	chr4:105405837-105474062	0	-	105405837	105405837	8553170	8	111,127,87,120,54,45,65,169,	0,18358,32112,40545,43512,47760,50843,68056,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	105406996	105407092	chr4:105406996-105407092	3	+	105406996	105406996	8553170	1	96,	0,
#Partially deleted in new
chr4	105423203	105474059	chr4:105423203-105474059	0	-	105423203	105423203	8553170	8	178,127,87,120,54,45,65,166,	0,992,14746,23179,26146,30394,33477,50690,
#Partially deleted in new
chr4	105424248	105474059	chr4:105424248-105474059	0	-	105424248	105474050	789624	7	74,87,120,54,45,50,166,	0,13701,22134,25101,29349,32447,49645,
#Partially deleted in new
chr4	105437976	105473709	chr4:105437976-105473709	0	-	105437976	105453627	789624	6	60,120,54,45,65,370,	0,8406,11373,15621,18704,35363,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	105438014	105474059	chr4:105438014-105474059	0	-	105448072	105474050	789624	7	22,120,99,54,45,65,166,	0,8368,9980,11335,15583,18666,35879,
#Partially deleted in new
chr4	105446201	105474059	chr4:105446201-105474059	0	-	105446201	105446201	8553170	5	301,54,45,65,166,	0,3148,7396,10479,27692,
#Partially deleted in new
chr4	105456080	105474032	chr4:105456080-105474032	0	-	105456080	105456080	8553170	2	665,139,	0,17813,
#Deleted in new
chr4	105473357	105474059	chr4:105473357-105474059	0	-	105473357	105473357	8553170	2	418,166,	0,536,
#Deleted in new
chr4	105484697	105486080	chr4:105484697-105486080	7	+	105484697	105484697	16724991	1	1383,	0,
#Deleted in new
chr4	105526595	105527397	chr4:105526595-105527397	7	-	105526595	105526595	16724991	1	802,	0,
#Deleted in new
chr4	105532474	105532630	chr4:105532474-105532630	7	+	105532474	105532474	16724991	1	156,	0,
#Partially deleted in new
chr4	105552619	105631680	chr4:105552619-105631680	1	+	105552765	105631049	789624	4	342,188,124,783,	0,36628,60764,78278,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr4	105552621	105680913	chr4:105552621-105680913	3	+	105552765	105677937	789624	14	340,188,124,148,18,200,134,105,120,312,144,199,260,3162,	0,36626,60762,78276,83781,92566,95927,101443,102981,106432,113555,114507,114822,125130,
#Partially deleted in new
chr4	105552892	105645298	chr4:105552892-105645298	0	+	105552892	105552892	8553170	4	69,188,124,111,	0,36355,60491,92295,
#Partially deleted in new
chr4	105561590	105570238	chr4:105561590-105570238	3	+	105561590	105561590	5263520	3	57,64,335,	0,1711,8313,
#Partially deleted in new
chr4	105632709	105667533	chr4:105632709-105667533	0	+	105632709	105632709	8553170	10	356,18,200,134,105,120,312,144,199,90,	0,3693,12478,15839,21355,22893,26344,33467,34419,34734,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	105678139	105695678	chr4:105678139-105695678	0	+	105678139	105678139	8553170	5	106,52,149,125,119,	0,2785,4321,4782,17420,
#Deleted in new
chr4	105679049	105680094	chr4:105679049-105680094	7	-	105679049	105679049	16724991	1	1045,	0,
#Partially deleted in new
chr4	105682626	105708681	chr4:105682626-105708681	1	-	105682732	105700005	789624	8	691,147,160,188,153,165,162,44,	0,4065,9349,10672,12889,17223,21021,26011,
#Partially deleted in new
chr4	105682626	105708081	chr4:105682626-105708081	1	-	105682732	105700005	789624	8	691,147,160,188,153,165,260,163,	0,4065,9349,10672,12889,17223,23063,25292,
#Partially deleted in new
chr4	105682626	105709108	chr4:105682626-105709108	3	-	105682732	105700005	789624	7	691,147,160,188,153,165,471,	0,4065,9349,10672,12889,17223,26011,
#Partially deleted in new
chr4	105682629	105700016	chr4:105682629-105700016	1	-	105682785	105700005	789624	7	177,510,147,160,188,153,167,	0,178,4062,9346,10669,12886,17220,
#Partially deleted in new
chr4	105683061	105687079	chr4:105683061-105687079	0	-	105683061	105683061	8553170	2	256,388,	0,3630,
#Partially deleted in new
chr4	105693317	105708665	chr4:105693317-105708665	0	-	105693317	105700005	789624	5	169,153,165,138,28,	0,2198,6532,9568,15320,
#Partially deleted in new
chr4	105693400	105708659	chr4:105693400-105708659	0	-	105693400	105700005	789624	6	86,153,165,138,162,22,	0,2115,6449,9485,10247,15237,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	105695523	105708085	chr4:105695523-105708085	0	+	105695523	105695523	8553170	6	162,84,77,91,145,185,	0,4664,9790,10355,10755,12377,
#Partially deleted in new
chr4	105695559	105708639	chr4:105695559-105708639	0	-	105695559	105700005	789624	3	109,165,721,	0,4290,12359,
#Partially deleted in new
chr4	105695561	105708683	chr4:105695561-105708683	0	-	105695561	105700005	789624	4	107,165,244,46,	0,4288,12357,13076,
#Partially deleted in new
chr4	105699950	105708656	chr4:105699950-105708656	0	-	105699950	105700005	789624	2	64,505,	0,8201,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	105700133	105708093	chr4:105700133-105708093	0	+	105700133	105700133	8553170	3	138,121,193,	0,6169,7767,
#Partially deleted in new
chr4	105708777	105717735	chr4:105708777-105717735	0	+	105717613	105717735	789624	2	429,143,	0,8815,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	105708783	105847725	chr4:105708783-105847725	3	+	105717613	105845577	789624	12	233,186,468,252,94,116,45,129,134,31,70,2285,	0,8809,10276,17795,20622,114170,114447,116888,125677,129075,133281,136657,
#Partially deleted in new
chr4	105708783	105845709	chr4:105708783-105845709	0	+	105708783	105708783	8553170	10	233,252,94,116,45,129,134,31,70,269,	0,17795,20622,114170,114447,116888,125677,129075,133281,136657,
#Partially deleted in new
chr4	105708786	105823690	chr4:105708786-105823690	0	+	105708786	105708786	8553170	6	230,447,468,252,94,737,	0,8806,10273,17792,20619,114167,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	105708786	105761885	chr4:105708786-105761885	1	+	105717613	105761068	789624	6	230,186,468,252,94,861,	0,8806,10273,17792,20619,52238,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	105708817	105847728	chr4:105708817-105847728	1	+	105717613	105845577	789624	12	199,447,468,252,94,116,45,129,134,31,70,2288,	0,8775,10242,17761,20588,114136,114413,116854,125643,129041,133247,136623,
#Partially deleted in new
chr4	105710809	105845754	chr4:105710809-105845754	1	+	105717613	105845577	789624	12	54,447,468,252,94,116,45,129,134,31,70,314,	0,6783,8250,15769,18596,112144,112421,114862,123651,127049,131255,134631,
#Partially deleted in new
chr4	105710812	105719133	chr4:105710812-105719133	0	+	105717613	105719133	789624	3	57,447,74,	0,6780,8247,
#Partially deleted in new
chr4	105710845	105719135	chr4:105710845-105719135	0	+	105717613	105719135	789624	3	195,447,76,	0,6747,8214,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	105712510	105845978	chr4:105712510-105845978	1	+	105717613	105845577	789624	12	92,447,468,252,94,116,45,129,134,31,70,538,	0,5082,6549,14068,16895,110443,110720,113161,121950,125348,129554,132930,
#Partially deleted in new
chr4	105717625	105719559	chr4:105717625-105719559	0	+	105717625	105717625	8553170	2	153,500,	0,1434,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	105746244	105827172	chr4:105746244-105827172	3	-	105746244	105746244	8553170	4	179,51,99,60,	0,7006,60939,80868,
#Partially deleted in new
chr4	105815144	105827156	chr4:105815144-105827156	1	-	105815144	105815144	8553170	6	167,60,136,63,11,44,	0,5397,5914,8230,10967,11968,
#Partially deleted in new
chr4	105815149	105827169	chr4:105815149-105827169	0	-	105815149	105815149	789624	4	162,60,63,57,	0,5392,8225,11963,
#Partially deleted in new
chr4	105894774	105938411	chr4:105894774-105938411	0	+	105937055	105938411	789624	5	118,101,93,120,111,	0,3126,32561,42234,43526,
#Partially deleted in new
chr4	105895436	105971674	chr4:105895436-105971674	3	+	105895652	105968990	789624	12	287,101,93,120,120,135,123,396,87,99,257,2780,	0,2464,31899,41572,42864,44638,45077,46870,63034,63591,71751,73458,
#Partially deleted in new
chr4	105895439	105969447	chr4:105895439-105969447	1	+	105895652	105968990	789624	13	284,101,51,93,120,120,135,123,396,87,99,257,553,	0,2461,16748,31896,41569,42861,44635,45074,46867,63031,63588,71748,73455,
#Partially deleted in new
chr4	105895440	105969471	chr4:105895440-105969471	1	+	105895652	105968990	789624	13	283,101,93,90,120,120,135,123,396,87,99,257,577,	0,2460,31895,37173,41568,42860,44634,45073,46866,63030,63587,71747,73454,
#Partially deleted in new
chr4	105895440	105969529	chr4:105895440-105969529	1	+	105895652	105968990	789624	11	283,101,93,120,120,135,123,396,99,257,635,	0,2460,31895,41568,42860,44634,45073,46866,63587,71747,73454,
#Partially deleted in new
chr4	105895450	105971670	chr4:105895450-105971670	1	+	105895652	105970399	789624	11	273,101,93,120,120,135,123,396,99,257,1286,	0,2450,31885,41558,42850,44624,45063,46856,63577,71737,74934,
#Partially deleted in new
chr4	105895492	105969316	chr4:105895492-105969316	1	+	105895652	105968990	789624	12	231,101,93,90,120,120,135,123,396,99,257,422,	0,2408,31843,37121,41516,42808,44582,45021,46814,63535,71695,73402,
#Partially deleted in new
chr4	105895652	105968980	chr4:105895652-105968980	0	+	105895652	105968980	789624	14	71,101,51,93,90,120,120,135,123,396,87,99,257,86,	0,2248,16535,31683,36961,41356,42648,44422,44861,46654,62818,63375,71535,73242,
#Partially deleted in new
chr4	105897900	105971216	chr4:105897900-105971216	0	+	105897900	105971199	789624	10	101,93,120,120,135,123,396,87,99,103,	0,29435,39108,40400,42174,42613,44406,60570,61127,73213,
#Partially deleted in new
chr4	105898101	105938314	chr4:105898101-105938314	0	+	105898101	105898101	8553170	7	35,102,96,174,93,120,14,	0,4592,13535,13963,29234,38907,40199,
#Partially deleted in new
chr4	105911862	105938348	chr4:105911862-105938348	0	+	105911862	105911862	8553170	4	376,93,120,48,	0,15473,25146,26438,
#Partially deleted in new
chr4	105912147	105927578	chr4:105912147-105927578	0	+	105912147	105912147	8553170	2	91,243,	0,15188,
#Partially deleted in new
chr4	105912175	105940138	chr4:105912175-105940138	0	+	105912175	105912175	8553170	6	63,109,93,120,120,64,	0,367,15160,24833,26125,27899,
#Partially deleted in new
chr4	105927059	105929578	chr4:105927059-105929578	0	-	105927059	105927059	8553170	2	358,99,	0,2420,
#Partially deleted in new
chr4	105927061	105932722	chr4:105927061-105932722	3	-	105927061	105927061	8553170	2	356,127,	0,5534,
#Partially deleted in new
chr4	105958898	105968945	chr4:105958898-105968945	0	+	105958898	105958898	8553170	3	228,257,51,	0,8289,9996,
#Partially deleted in new
chr4	105959058	105971670	chr4:105959058-105971670	0	+	105959058	105970629	789624	2	68,1286,	0,11326,
#Partially deleted in new
chr4	105959087	106004027	chr4:105959087-106004027	0	+	105959087	106003754	789624	2	39,314,	0,44626,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	106003316	106022478	chr4:106003316-106022478	3	-	106003316	106003316	789624	4	640,125,91,2670,	0,10871,15352,16492,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr4	106041598	106321495	chr4:106041598-106321495	3	-	106046569	106308960	789624	27	5082,160,176,176,162,37,86,84,51,127,63,99,130,50,100,139,149,62,62,61,142,74,115,73,222,190,229,	0,53883,74604,129496,152010,153119,171151,188764,190130,191339,191989,193670,194791,195160,200871,203027,205540,206646,207322,208819,210267,218838,220499,253495,267169,274949,279668,
#Partially deleted in new
chr4	106046075	106316704	chr4:106046075-106316704	1	-	106046569	106308960	789624	26	605,160,176,176,162,37,86,84,51,127,63,99,130,50,100,139,149,62,62,61,142,74,115,73,222,157,	0,49406,70127,125019,147533,148642,166674,184287,185653,186862,187512,189193,190314,190683,196394,198550,201063,202169,202845,204342,205790,214361,216022,249018,262692,270472,
#Partially deleted in new
chr4	106046078	106247722	chr4:106046078-106247722	0	-	106046078	106046078	8553170	17	602,160,176,176,162,37,86,84,51,127,63,99,130,50,100,139,584,	0,49403,70124,125016,147530,148639,166671,184284,185650,186859,187509,189190,190311,190680,196391,198547,201060,
#Partially deleted in new
chr4	106046079	106316230	chr4:106046079-106316230	1	-	106046569	106308960	789624	24	601,160,176,176,162,37,86,84,51,127,63,99,130,50,100,139,149,62,62,61,142,73,222,300,	0,49402,70123,125015,147529,148638,166670,184283,185649,186858,187508,189189,190310,190679,196390,198546,201059,202165,202841,204338,205786,249014,262688,269851,
#Partially deleted in new
chr4	106046090	106316206	chr4:106046090-106316206	1	-	106046569	106308960	789624	26	590,160,176,176,162,37,86,84,51,127,63,99,130,50,100,139,149,62,62,61,25,74,115,73,222,276,	0,49391,70112,125004,147518,148627,166659,184272,185638,186847,187497,189178,190299,190668,196379,198535,201048,202154,202830,204327,205892,214346,216007,249003,262677,269840,
#Partially deleted in new
chr4	106046094	106316209	chr4:106046094-106316209	0	-	106255040	106308960	789624	27	586,160,176,176,162,37,86,84,51,127,63,99,130,50,100,139,149,62,62,61,142,101,74,115,73,222,279,	0,49387,70108,125000,147514,148623,166655,184268,185634,186843,187493,189174,190295,190664,196375,198531,201044,202150,202826,204323,205771,208852,214342,216003,248999,262673,269836,
#Partially deleted in new
chr4	106046569	106316266	chr4:106046569-106316266	1	-	106046569	106308960	789624	26	111,160,176,176,162,37,86,84,51,127,63,99,130,50,100,139,149,62,62,61,142,74,115,73,222,336,	0,48912,69633,124525,147039,148148,166180,183793,185159,186368,187018,188699,189820,190189,195900,198056,200569,201675,202351,203848,205296,213867,215528,248524,262198,269361,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	106163278	106171240	chr4:106163278-106171240	0	-	106163278	106163278	8553170	3	348,70,146,	0,1113,7816,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	106171240	106213598	chr4:106171240-106213598	0	-	106171240	106171240	8553170	5	30,162,37,86,245,	0,22368,23477,41509,42113,
#Partially deleted in new
chr4	106232943	106247285	chr4:106232943-106247285	0	-	106237505	106247285	789624	9	121,63,99,130,50,48,100,139,147,	0,644,2325,3446,3815,4547,9526,11682,14195,
#Partially deleted in new
chr4	106232997	106238740	chr4:106232997-106238740	0	-	106232997	106235307	789624	7	67,63,99,130,50,48,144,	0,590,2271,3392,3761,4493,5599,
#Partially deleted in new
chr4	106244684	106250470	chr4:106244684-106250470	0	-	106247267	106250470	789624	3	80,149,53,	0,2454,5733,
#Partially deleted in new
chr4	106247822	106252007	chr4:106247822-106252007	0	-	106251080	106252007	789624	5	484,62,61,116,142,	0,1098,2595,3256,4043,
#Partially deleted in new
chr4	106251866	106297739	chr4:106251866-106297739	0	-	106251866	106251866	8553170	6	141,101,74,115,73,28,	0,3080,8570,10231,43227,45845,
#Partially deleted in new
chr4	106251983	106316266	chr4:106251983-106316266	0	-	106251983	106308960	789624	6	24,74,115,73,222,340,	0,8453,10114,43110,56784,63943,
#Partially deleted in new
chr4	106262163	106310588	chr4:106262163-106310588	0	-	106262163	106308960	789624	4	49,73,222,256,	0,32930,46604,48169,
#Partially deleted in new
chr4	106295155	106316235	chr4:106295155-106316235	0	-	106295155	106308960	789624	4	11,222,41,305,	0,13612,14771,20775,
#Partially deleted in new
chr4	106315543	106331730	chr4:106315543-106331730	0	+	106325009	106331730	789624	5	93,134,114,168,59,	0,9441,11907,12532,16128,
#Partially deleted in new
chr4	106315609	106349220	chr4:106315609-106349220	3	+	106325009	106347692	0	7	27,134,114,168,212,169,1695,	0,9375,11841,12466,16062,21259,31916,
#Partially deleted in new
chr4	106315695	106348491	chr4:106315695-106348491	1	+	106325009	106347692	0	7	649,134,114,168,212,169,966,	0,9289,11755,12380,15976,21173,31830,
#Partially deleted in new
chr4	106316506	106349226	chr4:106316506-106349226	1	+	106316547	106347692	0	7	88,134,114,168,212,169,1701,	0,8478,10944,11569,15165,20362,31019,
#Partially deleted in new
chr4	106357484	106368825	chr4:106357484-106368825	3	-	106358182	106367435	789624	3	959,395,116,	0,9558,11225,
#Partially deleted in new
chr4	106358182	106367435	chr4:106358182-106367435	1	-	106358182	106367435	789624	2	261,393,	0,8860,
#Partially deleted in new
chr4	106433623	106453448	chr4:106433623-106453448	3	+	106433623	106433623	789624	4	131,90,77,223,	0,988,15387,19602,
#Deleted in new
chr4	106836497	106837601	chr4:106836497-106837601	7	-	106836497	106836497	16724991	1	1104,	0,
#Partially deleted in new
chr4	106921801	107036297	chr4:106921801-107036297	3	-	106923953	107035591	789624	4	2403,156,151,928,	0,2743,3997,113568,
#Partially deleted in new
chr4	106923742	107283689	chr4:106923742-107283689	1	-	106923953	106925871	789624	5	462,156,151,99,57,	0,802,2056,264684,359890,
#Partially deleted in new
chr4	106923820	107035812	chr4:106923820-107035812	0	-	106923820	106923820	8553170	3	880,151,443,	0,1978,111549,
#Partially deleted in new
chr4	106923944	107283806	chr4:106923944-107283806	1	-	106923953	107188442	789624	6	260,156,151,68,99,174,	0,600,1854,203997,264482,359688,
#Deleted in new
chr4	107203348	107203924	chr4:107203348-107203924	7	-	107203348	107203348	16724991	1	576,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	107258699	107301870	chr4:107258699-107301870	3	+	107258699	107258699	8553170	2	175,382,	0,42789,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	107435117	107435220	chr4:107435117-107435220	3	+	107435117	107435117	8553170	1	103,	0,
#Partially deleted in new
chr4	107590275	107631804	chr4:107590275-107631804	0	-	107590275	107590275	8553170	2	122,174,	0,41355,
#Partially deleted in new
chr4	107613665	107720452	chr4:107613665-107720452	3	-	107614248	107720179	0	12	722,230,269,136,206,112,114,119,139,236,115,333,	0,17965,31136,39825,41029,43230,46293,68349,73373,80105,87505,106454,
#Partially deleted in new
chr4	107653492	107720222	chr4:107653492-107720222	0	-	107653492	107653492	8553170	7	134,206,112,114,119,139,103,	0,1202,3403,6466,28522,33546,66627,
#Partially deleted in new
chr4	107659959	107720023	chr4:107659959-107720023	0	-	107659959	107659959	8553170	6	113,119,139,236,115,181,	0,22055,27079,33811,41211,59883,
#Partially deleted in new
chr4	107687111	107720226	chr4:107687111-107720226	0	-	107687111	107687111	8553170	5	66,236,115,55,107,	0,6659,14059,31230,33008,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	107687128	107694298	chr4:107687128-107694298	0	-	107687128	107687128	8553170	2	49,528,	0,6642,
#Partially deleted in new
chr4	107693769	107720117	chr4:107693769-107720117	0	-	107693769	107693769	8553170	3	237,115,114,	0,7401,26234,
#Partially deleted in new
chr4	107693839	107720213	chr4:107693839-107720213	0	-	107693839	107693839	8553170	3	167,115,210,	0,7331,26164,
#Partially deleted in new
chr4	107824562	107915047	chr4:107824562-107915047	3	+	107895553	107910553	789624	7	231,82,699,118,154,167,4698,	0,33909,70747,75012,78670,84002,85787,
#Partially deleted in new
chr4	107824562	107895547	chr4:107824562-107895547	0	+	107824562	107824562	8553170	3	231,113,238,	0,33909,70747,
#Partially deleted in new
chr4	107824881	107895353	chr4:107824881-107895353	0	+	107824881	107824881	8553170	3	372,82,44,	0,33590,70428,
#Partially deleted in new
chr4	107825207	107908731	chr4:107825207-107908731	0	+	107899638	107908731	789624	5	46,82,118,154,167,	0,33264,74367,78025,83357,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	107867806	107867910	chr4:107867806-107867910	3	-	107867806	107867806	8553170	1	104,	0,
#Partially deleted in new
chr4	107893237	107910953	chr4:107893237-107910953	1	+	107895553	107910553	789624	6	145,699,118,154,167,604,	0,2072,6337,9995,15327,17112,
#Deleted in new
chr4	107893255	107895657	chr4:107893255-107895657	0	+	107895553	107895657	789624	2	222,348,	0,2054,
#Partially deleted in new
chr4	107893273	107910953	chr4:107893273-107910953	1	+	107895553	107910553	789624	6	385,699,118,154,167,604,	0,2036,6301,9959,15291,17076,
#Deleted in new
chr4	107894247	107895687	chr4:107894247-107895687	0	+	107895553	107895687	789624	2	203,378,	0,1062,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	107907199	107908227	chr4:107907199-107908227	0	+	107907199	107907199	8553170	2	175,284,	0,744,
#Partially deleted in new
chr4	107931368	107953457	chr4:107931368-107953457	3	+	107931643	107950423	789624	5	765,636,162,168,3213,	0,13601,16007,17981,18876,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	107931584	107936607	chr4:107931584-107936607	0	+	107931584	107931584	8553170	2	549,1013,	0,4010,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	107931595	107951667	chr4:107931595-107951667	1	+	107945106	107950423	789624	7	538,59,139,636,162,168,1423,	0,4921,6442,13374,15780,17754,18649,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	107936030	107941255	chr4:107936030-107941255	3	-	107936030	107936030	8553170	4	150,87,1775,1135,	0,456,1316,4090,
#Partially deleted in new
chr4	107989713	108034861	chr4:107989713-108034861	1	+	107989755	108034357	789624	9	351,129,158,127,90,73,51,117,623,	0,20045,24717,29826,33760,37974,42613,43462,44525,
#Partially deleted in new
chr4	107989713	108035174	chr4:107989713-108035174	1	+	107989932	108034357	0	9	351,129,158,127,90,73,51,117,936,	0,20045,24717,29826,33760,37974,42613,43462,44525,
#Partially deleted in new
chr4	107989783	108035175	chr4:107989783-108035175	3	+	107989932	108034357	0	8	281,129,158,127,90,73,117,937,	0,19975,24647,29756,33690,37904,43392,44455,
#Partially deleted in new
chr4	107989828	108034762	chr4:107989828-108034762	0	+	107989932	108023492	789624	7	236,129,158,90,73,117,524,	0,19930,24602,33645,37859,43347,44410,
#Partially deleted in new
chr4	107989836	108035149	chr4:107989836-108035149	0	+	107989932	108027967	789624	9	228,129,158,127,90,73,131,117,911,	0,19922,24594,29703,33637,37851,38102,43339,44402,
#Partially deleted in new
chr4	107989853	108034488	chr4:107989853-108034488	1	+	107989932	108034357	789624	5	211,90,73,117,250,	0,33620,37834,43322,44385,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	107989853	108035157	chr4:107989853-108035157	0	+	107989853	107989853	8553170	7	211,129,158,127,4287,117,919,	0,19905,24577,29686,33620,43322,44385,
#Partially deleted in new
chr4	107989854	108005334	chr4:107989854-108005334	0	+	107989932	108004690	789624	3	210,254,107,	0,14809,15373,
#Partially deleted in new
chr4	107989857	108004750	chr4:107989857-108004750	0	+	107989857	107989857	8553170	2	207,291,	0,14602,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	107989889	108025941	chr4:107989889-108025941	0	+	107989889	107989889	8553170	5	175,129,158,127,2468,	0,19869,24541,29650,33584,
#Partially deleted in new
chr4	107989895	108035118	chr4:107989895-108035118	1	+	107989932	108034357	789624	9	169,129,158,127,90,73,9,117,880,	0,19863,24535,29644,33578,37792,38965,43280,44343,
#Partially deleted in new
chr4	107989901	108035022	chr4:107989901-108035022	0	+	107989932	108004690	789624	9	163,254,129,158,127,90,73,117,784,	0,14762,19857,24529,29638,33572,37786,43274,44337,
#Partially deleted in new
chr4	107989945	108034923	chr4:107989945-108034923	0	+	107989945	108034357	789624	7	119,158,127,90,73,117,685,	0,24485,29594,33528,37742,43230,44293,
#Partially deleted in new
chr4	107989977	108035120	chr4:107989977-108035120	0	+	107989977	107989977	8553170	8	87,129,158,127,90,382,117,882,	0,19781,24453,29562,33496,37710,43198,44261,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	107990015	108025946	chr4:107990015-108025946	0	+	107990015	108004563	789624	6	49,372,129,158,127,2473,	0,14530,19743,24415,29524,33458,
#Partially deleted in new
chr4	107990052	108035112	chr4:107990052-108035112	0	+	107990052	108033211	789624	7	12,129,158,127,90,117,874,	0,19706,24378,29487,33421,43123,44186,
#Partially deleted in new
chr4	108004634	108035171	chr4:108004634-108035171	0	+	108004634	108004634	8553170	8	283,129,158,127,90,73,117,933,	0,5124,9796,14905,18839,23053,28541,29604,
#Partially deleted in new
chr4	108004773	108035174	chr4:108004773-108035174	1	+	108004773	108034357	789624	8	144,129,158,127,90,73,117,936,	0,4985,9657,14766,18700,22914,28402,29465,
#Partially deleted in new
chr4	108009762	108035103	chr4:108009762-108035103	0	+	108009762	108023492	789624	5	125,158,90,117,865,	0,4668,13711,23413,24476,
#Partially deleted in new
chr4	108009788	108035110	chr4:108009788-108035110	0	+	108009788	108024458	789624	8	99,158,127,90,134,73,117,872,	0,4642,9751,13685,14646,17899,23387,24450,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	108025864	108035151	chr4:108025864-108035151	0	+	108025864	108025864	8553170	3	2205,117,913,	0,7311,8374,
#Partially deleted in new
chr4	108027511	108034492	chr4:108027511-108034492	0	+	108027511	108027511	8553170	4	249,131,117,254,	0,427,5664,6727,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	108027618	108035105	chr4:108027618-108035105	0	+	108027618	108027618	8553170	2	5674,867,	0,6620,
#Partially deleted in new
chr4	108047544	108168422	chr4:108047544-108168422	3	-	108063628	108167767	789624	12	1207,41,49,108,163,123,84,91,133,134,67,868,	0,16078,16791,23118,30675,31947,34041,35811,41580,116023,117552,120010,
#Partially deleted in new
chr4	108047544	108168956	chr4:108047544-108168956	1	-	108048671	108167767	789624	10	1207,49,108,163,123,91,133,134,67,1402,	0,16791,23118,30675,31947,35811,41580,116023,117552,120010,
#Partially deleted in new
chr4	108047572	108078352	chr4:108047572-108078352	0	-	108047572	108047572	8553170	4	1202,49,108,133,	0,16763,23090,30647,
#Partially deleted in new
chr4	108047591	108071778	chr4:108047591-108071778	0	-	108047591	108047591	8553170	5	1160,41,49,108,121,	0,16031,16744,23071,24066,
#Partially deleted in new
chr4	108048168	108083413	chr4:108048168-108083413	0	-	108048168	108048168	8553170	6	583,49,108,163,123,58,	0,16167,22494,30051,31323,35187,
#Partially deleted in new
chr4	108048299	108078382	chr4:108048299-108078382	0	-	108048299	108048299	8553170	6	452,41,49,108,103,163,	0,15323,16036,22363,27075,29920,
#Partially deleted in new
chr4	108048353	108072896	chr4:108048353-108072896	0	-	108048353	108048353	8553170	7	398,41,49,108,86,131,60,	0,15269,15982,22309,23304,23649,24483,
#Partially deleted in new
chr4	108048376	108165255	chr4:108048376-108165255	0	-	108048376	108048376	8553170	10	375,41,49,108,163,123,91,133,134,159,	0,15246,15959,22286,29843,31115,34979,40748,115191,116720,
#Partially deleted in new
chr4	108048416	108167798	chr4:108048416-108167798	1	-	108063628	108167767	789624	11	335,41,49,108,163,123,91,133,134,67,244,	0,15206,15919,22246,29803,31075,34939,40708,115151,116680,119138,
#Partially deleted in new
chr4	108048526	108070895	chr4:108048526-108070895	0	-	108048526	108048526	8553170	4	225,41,49,233,	0,15096,15809,22136,
#Partially deleted in new
chr4	108048596	108165195	chr4:108048596-108165195	0	-	108048596	108048596	8553170	10	155,35,49,108,163,123,91,133,134,99,	0,15026,15739,22066,29623,30895,34759,40528,114971,116500,
#Partially deleted in new
chr4	108048634	108072251	chr4:108048634-108072251	0	-	108048634	108048634	8553170	5	117,41,49,108,249,	0,14988,15701,22028,23368,
#Partially deleted in new
chr4	108048638	108166721	chr4:108048638-108166721	1	-	108063628	108166280	789624	11	113,41,49,108,163,123,91,133,134,67,450,	0,14984,15697,22024,29581,30853,34717,40486,114929,116458,117633,
#Partially deleted in new
chr4	108063628	108167767	chr4:108063628-108167767	0	-	108078317	108167767	789624	11	35,49,108,243,123,84,91,133,134,67,213,	0,707,7034,14591,15863,17957,19727,25496,99939,101468,103926,
#Partially deleted in new
chr4	108070429	108078405	chr4:108070429-108078405	0	-	108070429	108070429	8553170	2	341,186,	0,7790,
#Partially deleted in new
chr4	108070661	108167594	chr4:108070661-108167594	0	-	108070661	108070661	8553170	8	109,163,123,91,133,134,67,40,	0,7558,8830,12694,18463,92906,94435,96893,
#Partially deleted in new
chr4	108078324	108166286	chr4:108078324-108166286	0	-	108079597	108166280	789624	7	58,123,84,91,134,67,15,	0,1167,3261,5031,85243,86772,87947,
#Partially deleted in new
chr4	108081583	108166797	chr4:108081583-108166797	0	-	108081583	108166280	789624	6	86,91,133,134,67,526,	0,1772,7541,81984,83513,84688,
#Partially deleted in new
chr4	108081620	108165257	chr4:108081620-108165257	0	-	108081620	108081620	8553170	5	49,91,133,134,161,	0,1735,7504,81947,83476,
#Partially deleted in new
chr4	108083212	108166301	chr4:108083212-108166301	1	-	108083351	108166280	789624	5	234,133,134,67,30,	0,5912,80355,81884,83059,
#Partially deleted in new
chr4	108083367	108166796	chr4:108083367-108166796	0	-	108083367	108083367	8553170	5	79,133,134,67,139,	0,5757,80200,81729,83290,
#Partially deleted in new
chr4	108167524	108176426	chr4:108167524-108176426	1	+	108167524	108167524	789624	3	309,101,635,	0,5894,8267,
#Deleted in new
chr4	108171770	108173768	chr4:108171770-108173768	3	+	108171770	108171770	8553170	2	209,350,	0,1648,
#Partially deleted in new
chr4	108172119	108176426	chr4:108172119-108176426	1	+	108172119	108172119	789624	3	939,101,635,	0,1299,3672,
#Partially deleted in new
chr4	108172698	108199920	chr4:108172698-108199920	1	+	108172698	108172698	8553170	2	360,99,	0,27123,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	108172708	108176428	chr4:108172708-108176428	0	+	108172708	108172708	8553170	2	350,3010,	0,710,
#Partially deleted in new
chr4	108173418	108176430	chr4:108173418-108176430	1	+	108173418	108173418	8553170	3	101,202,141,	0,2373,2871,
#Partially deleted in new
chr4	108176287	108256836	chr4:108176287-108256836	1	+	108176287	108176287	8553170	3	100,138,192,	0,23534,80357,
#Deleted in new
chr4	108407842	108408578	chr4:108407842-108408578	7	-	108407842	108407842	16724991	1	736,	0,
#Partially deleted in new
chr4	108415219	108416639	chr4:108415219-108416639	7	+	108415219	108415219	16724991	4	153,206,165,186,	0,260,609,1234,
#Partially deleted in new
chr4	108417704	108419763	chr4:108417704-108419763	7	-	108417704	108417704	16724991	1	2059,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	108538189	108620397	chr4:108538189-108620397	3	-	108538189	108538189	789624	4	2625,198,800,90,	0,3829,18075,82118,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	108556100	108620395	chr4:108556100-108620395	0	-	108556100	108556100	8553170	3	964,128,88,	0,52422,64207,
#Partially deleted in new
chr4	108590362	108620460	chr4:108590362-108620460	0	-	108590362	108590362	8553170	4	118,158,133,153,	0,8175,12350,29945,
#Partially deleted in new
chr4	108620565	108625255	chr4:108620565-108625255	1	+	108621959	108625212	0	5	35,74,100,104,128,	0,1385,1539,1949,4562,
#Partially deleted in new
chr4	108620589	108625255	chr4:108620589-108625255	1	+	108621959	108625212	0	5	123,74,100,104,128,	0,1361,1515,1925,4538,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	108620625	108623332	chr4:108620625-108623332	0	+	108620625	108620625	8553170	2	1399,1228,	0,1479,
#Partially deleted in new
chr4	108620632	108625252	chr4:108620632-108625252	1	+	108621959	108625212	0	6	80,66,74,100,104,125,	0,998,1318,1472,1882,4495,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	108620655	108630412	chr4:108620655-108630412	3	+	108621959	108625212	0	6	57,74,100,104,126,392,	0,1295,1449,1859,4472,9365,
#Partially deleted in new
chr4	108622042	108625180	chr4:108622042-108625180	0	+	108622042	108622042	8553170	2	576,53,	0,3085,
#Partially deleted in new
chr4	108650583	108667820	chr4:108650583-108667820	3	+	108650655	108667265	789624	4	211,94,198,574,	0,4980,6866,16663,
#Partially deleted in new
chr4	108650584	108667818	chr4:108650584-108667818	1	+	108650655	108667265	789624	3	210,94,572,	0,4979,16662,
#Partially deleted in new
chr4	108650626	108657612	chr4:108650626-108657612	0	+	108650626	108650626	8553170	2	168,163,	0,6823,
#Deleted in new
chr4	108650632	108651496	chr4:108650632-108651496	0	+	108650632	108650632	8553170	2	162,466,	0,398,
#Partially deleted in new
chr4	108742039	108763053	chr4:108742039-108763053	3	-	108742483	108762898	789624	13	573,68,131,90,155,226,83,117,91,75,160,119,211,	0,1749,4359,4722,5965,7198,8896,10855,12580,14378,17709,18148,20803,
#Partially deleted in new
chr4	108742047	108763008	chr4:108742047-108763008	1	-	108742483	108762898	789624	13	565,68,131,90,155,226,83,117,91,75,142,119,166,	0,1741,4351,4714,5957,7190,8888,10847,12572,14370,17701,18140,20795,
#Partially deleted in new
chr4	108742391	108762964	chr4:108742391-108762964	1	-	108742483	108762821	789624	12	221,68,131,90,155,226,83,117,91,75,160,144,	0,1397,4007,4370,5613,6846,8544,10503,12228,14026,17357,20429,
#Partially deleted in new
chr4	108742468	108763053	chr4:108742468-108763053	1	-	108742483	108760242	789624	13	144,68,131,90,155,226,83,117,91,75,160,119,233,	0,1320,3930,4293,5536,6769,8467,10426,12151,13949,17280,17719,20352,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	108747781	108751006	chr4:108747781-108751006	0	-	108747781	108747781	8553170	3	378,226,71,	0,1456,3154,
#Partially deleted in new
chr4	108749355	108762929	chr4:108749355-108762929	0	-	108756472	108762898	789624	7	108,83,117,91,75,119,87,	0,1580,3539,5264,7062,10832,13487,
#Partially deleted in new
chr4	108752922	108754790	chr4:108752922-108754790	0	-	108752922	108752922	8553170	2	89,171,	0,1697,
#Partially deleted in new
chr4	108752973	108763054	chr4:108752973-108763054	0	-	108759814	108762898	789624	5	38,91,75,160,212,	0,1646,3444,6775,9869,
#Partially deleted in new
chr4	108756428	108762535	chr4:108756428-108762535	0	-	108756428	108759864	789624	3	64,160,343,	0,3320,5764,
#Partially deleted in new
chr4	108756441	108762717	chr4:108756441-108762717	0	-	108756441	108762386	789624	3	51,160,332,	0,3307,5944,
#Deleted in new
chr4	108773612	108774020	chr4:108773612-108774020	7	+	108773612	108773612	16724991	1	408,	0,
#Deleted in new
chr4	108788744	108789779	chr4:108788744-108789779	7	-	108788744	108788744	16724991	1	1035,	0,
#Partially deleted in new
chr4	108808724	109302752	chr4:108808724-109302752	1	-	108813926	109302019	789624	39	5205,39,87,54,27,54,54,36,81,27,51,63,81,45,45,24,78,45,45,69,63,45,36,33,45,27,54,45,27,36,108,72,27,27,18,8,45,70,1030,	0,8672,11087,15449,16471,18410,23655,25630,29373,32970,35794,36464,37414,40034,43511,44177,50931,52202,53776,54594,60363,75453,80496,80976,87942,90429,92394,109447,111853,129083,131814,132641,165642,165808,201633,239443,241410,491858,492998,
#Partially deleted in new
chr4	108810720	109302367	chr4:108810720-109302367	0	-	108827183	109302019	789624	37	1536,1226,39,87,54,27,54,54,36,27,51,63,37,45,45,24,78,45,45,69,63,45,36,33,45,27,54,45,27,27,27,18,8,45,70,353,65,	0,1983,6676,9091,13453,14475,16414,21659,23634,30974,33798,34468,35462,38038,41515,42181,48935,50206,51780,52598,58367,73457,78500,78980,85946,88433,90398,107451,109857,163646,163812,199637,237447,239414,489862,491002,491582,
#Partially deleted in new
chr4	108810720	109050182	chr4:108810720-109050182	1	-	108827183	108937810	789624	35	3209,39,78,54,27,54,54,36,27,51,63,37,45,45,24,78,45,45,69,63,45,36,33,45,27,54,45,27,36,108,72,27,27,18,56,	0,6676,8531,13453,14475,16414,21659,23634,30974,33798,34468,35462,38038,41515,42181,48935,50206,51780,52598,58367,73457,78500,78980,85946,88433,90398,107451,109857,127087,129818,130645,163646,163812,199637,239406,
#Partially deleted in new
chr4	108810720	109050182	chr4:108810720-109050182	1	-	108813926	108941437	789624	36	3209,39,78,54,27,54,54,27,51,63,81,45,45,24,2,82,45,45,69,63,45,36,33,45,27,54,45,27,2,40,108,72,27,27,18,56,	0,6676,8531,13453,14475,16414,21659,30974,33798,34468,35418,38038,41515,42181,43346,48931,50206,51780,52598,58367,73457,78500,78980,85946,88433,90398,107451,109857,110275,127083,129818,130645,163646,163812,199637,239406,
#Partially deleted in new
chr4	108813698	109302643	chr4:108813698-109302643	3	-	108813926	109302019	789624	38	231,39,78,54,27,54,54,27,51,63,81,45,45,24,78,45,45,69,63,45,36,33,45,27,54,45,27,36,108,72,27,27,18,8,45,70,353,475,	0,3698,5553,10475,11497,13436,18681,27996,30820,31490,32440,35060,38537,39203,45957,47228,48802,49620,55389,70479,75522,76002,82968,85455,87420,104473,106879,124109,126840,127667,160668,160834,196659,234469,236436,486884,488024,488470,
#Partially deleted in new
chr4	108813698	108824219	chr4:108813698-108824219	0	-	108813926	108824219	789624	3	231,39,46,	0,3698,10475,
#Partially deleted in new
chr4	108823875	109302643	chr4:108823875-109302643	1	-	108824089	109302019	789624	35	352,27,54,54,27,51,63,81,45,45,24,78,45,45,69,63,45,36,33,45,27,54,45,27,36,108,72,27,27,18,8,45,70,353,475,	0,1320,3259,8504,17819,20643,21313,22263,24883,28360,29026,35780,37051,38625,39443,45212,60302,65345,65825,72791,75278,77243,94296,96702,113932,116663,117490,150491,150657,186482,224292,226259,476707,477847,478293,
#Partially deleted in new
chr4	108823875	109302367	chr4:108823875-109302367	1	-	108824089	109302019	789624	33	352,54,54,36,81,27,51,63,81,45,45,78,45,69,63,45,36,33,45,27,54,45,27,36,108,60,27,27,18,8,45,70,645,	0,3259,8504,10479,14222,17819,20643,21313,22263,24883,28360,35780,37051,39443,45212,60302,65345,65825,72791,75278,77243,94296,96702,113932,116663,118333,150491,150657,186482,224292,226259,476707,477847,
#Partially deleted in new
chr4	108824173	108832692	chr4:108824173-108832692	0	-	108824173	108824173	8553170	4	54,27,54,313,	0,1022,2961,8206,
#Deleted in new
chr4	109301808	109302657	chr4:109301808-109302657	0	-	109301808	109302019	789624	2	267,161,	0,688,
#Deleted in new
chr4	109346325	109347459	chr4:109346325-109347459	7	-	109346325	109346325	16724991	1	1134,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	109429962	109433817	chr4:109429962-109433817	1	-	109429962	109429962	789624	3	818,55,84,	0,1729,3771,
#Partially deleted in new
chr4	109433812	109539696	chr4:109433812-109539696	3	+	109433869	109539675	0	23	190,744,183,81,242,185,103,127,110,113,119,56,207,124,159,174,111,176,138,105,93,104,136,	0,29088,39191,57514,60802,72515,76196,78144,79934,82715,86553,87304,87607,91005,91533,92413,93509,96476,97572,98826,99780,104680,105748,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr4	109433814	109540896	chr4:109433814-109540896	1	+	109433869	109539675	0	24	188,744,183,105,81,242,185,103,127,110,113,119,56,207,124,159,174,111,176,138,105,93,104,1336,	0,29086,39189,47862,57512,60800,72513,76194,78142,79932,82713,86551,87302,87605,91003,91531,92411,93507,96474,97570,98824,99778,104678,105746,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	109450771	109451068	chr4:109450771-109451068	3	-	109450771	109450771	8553170	1	297,	0,
#Deleted in new
chr4	109553242	109554094	chr4:109553242-109554094	7	-	109553242	109553242	16724991	1	852,	0,
#Deleted in new
chr4	109555169	109555732	chr4:109555169-109555732	7	+	109555169	109555169	16724991	1	563,	0,
#Partially deleted in new
chr4	109560204	109688726	chr4:109560204-109688726	3	+	109560337	109687592	789624	8	232,76,171,105,161,204,117,1212,	0,98806,99990,104085,122377,124238,125046,127310,
#Partially deleted in new
chr4	109560208	109683194	chr4:109560208-109683194	0	+	109560208	109560208	8553170	5	228,76,171,105,613,	0,98802,99986,104081,122373,
#Partially deleted in new
chr4	109560211	109660346	chr4:109560211-109660346	0	+	109560211	109560211	8553170	3	225,76,152,	0,98799,99983,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	109560989	109681469	chr4:109560989-109681469	0	+	109560989	109560989	8553170	6	28,166,76,171,105,35,	0,87494,98021,99205,103300,120445,
#Deleted in new
chr4	109673842	109674124	chr4:109673842-109674124	7	+	109673842	109673842	16724991	1	282,	0,
#Partially deleted in new
chr4	109684439	109687716	chr4:109684439-109687716	0	+	109684439	109684439	8553170	2	928,202,	0,3075,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	109688621	109703419	chr4:109688621-109703419	1	-	109689329	109703395	0	4	947,160,176,64,	0,2228,5903,14734,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	109688741	109703473	chr4:109688741-109703473	3	-	109689329	109703395	0	7	827,160,176,77,147,43,118,	0,2108,5783,7668,8880,9558,14614,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	109688901	109694589	chr4:109688901-109694589	0	-	109688901	109688901	8553170	3	667,160,65,	0,1948,5623,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	109689216	109696495	chr4:109689216-109696495	0	-	109689216	109689216	8553170	4	352,160,176,86,	0,1633,5308,7193,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	109689262	109694701	chr4:109689262-109694701	0	-	109689262	109689262	8553170	3	306,160,177,	0,1587,5262,
#Partially deleted in new
chr4	109690877	109697779	chr4:109690877-109697779	0	-	109690877	109690877	8553170	4	132,176,77,158,	0,3647,5532,6744,
#Deleted in new
chr4	109692003	109692703	chr4:109692003-109692703	3	+	109692003	109692003	8553170	1	700,	0,
#Partially deleted in new
chr4	109694523	109702849	chr4:109694523-109702849	0	-	109694523	109698328	789624	5	177,77,147,43,143,	0,1886,3098,3776,8183,
#Partially deleted in new
chr4	109694580	109703583	chr4:109694580-109703583	1	-	109694687	109703395	789624	4	120,147,43,228,	0,3041,3719,8775,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	109709988	109730077	chr4:109709988-109730077	3	-	109714376	109729809	789624	4	4507,166,77,476,	0,7559,8694,19613,
#Partially deleted in new
chr4	109713915	109801999	chr4:109713915-109801999	3	-	109714376	109801971	789624	15	580,166,77,105,281,104,104,36,21,111,114,176,154,271,85,	0,3632,4767,28575,32306,35302,35583,38552,43847,46354,46607,47601,50621,52638,87999,
#Partially deleted in new
chr4	109713916	109729974	chr4:109713916-109729974	1	-	109714376	109729809	789624	4	579,166,71,373,	0,3631,4772,15685,
#Partially deleted in new
chr4	109714261	109729956	chr4:109714261-109729956	0	-	109717708	109729809	789624	3	234,166,355,	0,3286,15340,
#Deleted in new
chr4	109717547	109718761	chr4:109717547-109718761	0	-	109717547	109717547	8553170	2	166,79,	0,1135,
#Partially deleted in new
chr4	109740693	109802179	chr4:109740693-109802179	3	-	109740892	109801971	0	13	417,105,281,104,104,36,21,111,114,176,154,271,265,	0,1797,5528,8524,8805,11774,17069,19576,19829,20823,23843,25860,61221,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	109740693	109762591	chr4:109740693-109762591	0	-	109740693	109740693	8553170	10	417,105,281,104,104,36,21,111,114,1075,	0,1797,5528,8524,8805,11774,17069,19576,19829,20823,
#Partially deleted in new
chr4	109740695	109802051	chr4:109740695-109802051	1	-	109740892	109801971	789624	14	415,105,281,104,104,36,21,24,111,114,176,154,271,137,	0,1795,5526,8522,8803,11772,17067,17240,19574,19827,20821,23841,25858,61219,
#Partially deleted in new
chr4	109740712	109802179	chr4:109740712-109802179	1	-	109740712	109801971	789624	10	93,104,36,21,111,114,176,154,271,265,	0,8786,11755,17050,19557,19810,20804,23824,25841,61202,
#Partially deleted in new
chr4	109740723	109801985	chr4:109740723-109801985	1	-	109740892	109801971	789624	12	387,105,281,104,104,36,111,114,176,154,271,71,	0,1767,5498,8494,8775,11744,19546,19799,20793,23813,25830,61191,
#Partially deleted in new
chr4	109741875	109746292	chr4:109741875-109746292	0	-	109741875	109741875	8553170	2	720,71,	0,4346,
#Partially deleted in new
chr4	109764358	109801978	chr4:109764358-109801978	1	-	109764532	109801971	789624	3	332,271,64,	0,2195,37556,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	109766774	109801999	chr4:109766774-109801999	0	-	109766774	109766774	8553170	3	50,1000,85,	0,26651,35140,
#Deleted in new
chr4	109815046	109815410	chr4:109815046-109815410	3	-	109815046	109815046	8553170	1	364,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	109815509	109824740	chr4:109815509-109824740	3	+	109816164	109824431	789624	7	36,226,155,60,142,69,323,	0,643,2426,3491,6837,8455,8908,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	109815552	109824737	chr4:109815552-109824737	1	+	109816164	109824431	789624	7	252,226,155,60,142,69,320,	0,600,2383,3448,6794,8412,8865,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	109815634	109822566	chr4:109815634-109822566	0	+	109815634	109815634	8553170	5	170,226,155,60,220,	0,518,2301,3366,6712,
#Partially deleted in new
chr4	109815827	109819587	chr4:109815827-109819587	0	+	109815827	109815827	8553170	4	178,226,155,587,	0,325,2108,3173,
#Partially deleted in new
chr4	109827993	109844604	chr4:109827993-109844604	3	+	109828027	109844197	789624	7	140,191,100,154,169,179,522,	0,5145,7372,8013,9443,14475,16089,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	109848201	109872315	chr4:109848201-109872315	3	+	109848201	109870789	789624	4	116,473,306,2671,	0,3302,19439,21443,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	109851329	109872315	chr4:109851329-109872315	1	+	109865235	109870789	789624	4	647,157,306,2671,	0,13789,16311,18315,
#Deleted in new
chr4	109879069	109879897	chr4:109879069-109879897	7	-	109879069	109879069	16724991	1	828,	0,
#Partially deleted in new
chr4	109912883	110011994	chr4:109912883-110011994	1	+	109913335	110011455	0	23	579,200,182,228,203,123,123,126,137,149,105,224,168,150,120,117,126,123,148,168,118,79,793,	0,28062,30370,30958,32189,47983,48979,50289,51517,56087,61819,63128,67088,67942,70538,74860,75700,80363,81849,86795,91621,95268,98318,
#Partially deleted in new
chr4	109912890	110012266	chr4:109912890-110012266	3	+	109913335	110011455	0	24	572,200,182,228,203,126,123,123,126,137,149,105,224,168,150,120,117,126,123,148,168,118,79,1065,	0,28055,30363,30951,32182,46421,47976,48972,50282,51510,56080,61812,63121,67081,67935,70531,74853,75693,80356,81842,86788,91614,95261,98311,
#Partially deleted in new
chr4	109913240	110011501	chr4:109913240-110011501	1	+	109913335	110011455	0	23	222,200,182,228,203,126,123,123,126,137,149,105,224,168,150,120,117,126,148,168,118,79,300,	0,27705,30013,30601,31832,46071,47626,48622,49932,51160,55730,61462,62771,66731,67585,70181,74503,75343,81492,86438,91264,94911,97961,
#Partially deleted in new
chr4	109940775	109943972	chr4:109940775-109943972	0	+	109940775	109940775	8553170	3	370,182,131,	0,2478,3066,
#Partially deleted in new
chr4	109959133	109963206	chr4:109959133-109963206	0	+	109959133	109959133	8553170	4	304,123,123,34,	0,1733,2729,4039,
#Partially deleted in new
chr4	109968804	109976171	chr4:109968804-109976171	0	+	109968804	109968804	8553170	3	315,105,160,	0,5898,7207,
#Deleted in new
chr4	109976086	109977536	chr4:109976086-109977536	0	+	109976086	109976086	8553170	2	149,283,	0,1167,
#Partially deleted in new
chr4	109980640	109987855	chr4:109980640-109987855	0	+	109980640	109980640	8553170	3	335,120,112,	0,2781,7103,
#Partially deleted in new
chr4	109980676	110011689	chr4:109980676-110011689	0	+	109980676	109980676	8553170	7	299,120,123,148,168,118,488,	0,2745,12570,14056,19002,23828,30525,
#Partially deleted in new
chr4	110004246	110011598	chr4:110004246-110011598	0	+	110004246	110004246	8553170	2	376,397,	0,6955,
#Partially deleted in new
chr4	110004500	110011491	chr4:110004500-110011491	0	+	110004500	110004500	8553170	3	122,79,290,	0,3651,6701,
#Partially deleted in new
chr4	110004500	110012220	chr4:110004500-110012220	0	+	110004500	110004500	8553170	3	122,107,95,	0,6701,7625,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	110045845	110198653	chr4:110045845-110198653	3	-	110051337	110198335	789624	5	5917,152,132,121,132,	0,13757,59651,152401,152676,
#Partially deleted in new
chr4	110049386	110198676	chr4:110049386-110198676	1	-	110051337	110198335	789624	4	2376,152,132,430,	0,10216,56110,148860,
#Partially deleted in new
chr4	110051669	110199179	chr4:110051669-110199179	0	-	110059707	110198335	789624	6	93,152,29,132,121,80,	0,7933,41436,53827,146577,147430,
#Partially deleted in new
chr4	110051693	110060039	chr4:110051693-110060039	0	-	110051693	110051693	8553170	2	69,437,	0,7909,
#Partially deleted in new
chr4	110051725	110199009	chr4:110051725-110199009	0	-	110051725	110198335	789624	5	37,152,132,121,168,	0,7877,53771,146521,147116,
#Partially deleted in new
chr4	110059644	110198550	chr4:110059644-110198550	0	-	110059644	110059644	8553170	4	110,29,132,304,	0,33461,45852,138602,
#Partially deleted in new
chr4	110059649	110199199	chr4:110059649-110199199	0	-	110059649	110198335	789624	4	105,132,121,100,	0,45847,138597,139450,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	110117735	110118070	chr4:110117735-110118070	3	+	110117735	110117735	8553170	1	335,	0,
#Partially deleted in new
chr4	110146373	110147248	chr4:110146373-110147248	7	+	110146373	110146373	16724991	2	330,241,	0,634,
#Deleted in new
chr4	110197890	110198366	chr4:110197890-110198366	0	-	110197890	110197890	8553170	2	84,120,	0,356,
#Partially deleted in new
chr4	110251870	110252099	chr4:110251870-110252099	7	-	110251870	110251870	16724991	1	229,	0,
#Deleted in new
chr4	110264864	110265017	chr4:110264864-110265017	7	-	110264864	110264864	16724991	1	153,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	110278184	110278291	chr4:110278184-110278291	3	+	110278184	110278184	8553170	1	107,	0,
#Deleted in new
chr4	110291643	110293573	chr4:110291643-110293573	7	+	110291643	110291643	16724991	1	1930,	0,
#Partially deleted in new
chr4	110365732	110506258	chr4:110365732-110506258	0	+	110365732	110365732	8553170	5	72,142,132,135,76,	0,122808,125300,134296,140450,
#Deleted in new
chr4	110399772	110400511	chr4:110399772-110400511	7	-	110399772	110399772	16724991	1	739,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	110415897	110418504	chr4:110415897-110418504	7	+	110415897	110415897	16724991	2	111,2230,	0,377,
#Deleted in new
chr4	110433108	110433188	chr4:110433108-110433188	3	-	110433108	110433108	8553170	1	80,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr4	110476072	110565285	chr4:110476072-110565285	3	+	110476414	110561558	0	20	986,142,132,121,155,114,135,66,66,152,80,137,56,151,74,105,171,141,79,3880,	0,12468,14960,30564,33580,34172,37342,39304,43935,44142,55125,66678,66942,72103,73273,73455,73643,77242,83574,85333,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	110512487	110519505	chr4:110512487-110519505	3	-	110512487	110512487	8553170	4	712,94,175,466,	0,958,3207,6552,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	110513488	110533427	chr4:110513488-110533427	0	+	110513488	110533093	789624	6	61,66,66,152,80,342,	0,1888,6519,6726,17709,19597,
#Partially deleted in new
chr4	110549427	110553517	chr4:110549427-110553517	0	+	110549427	110549427	8553170	3	205,171,203,	0,288,3887,
#Partially deleted in new
chr4	110559107	110565057	chr4:110559107-110565057	0	+	110559107	110559107	8553170	5	72,79,125,133,261,	0,539,2298,3995,5689,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	110595512	110615458	chr4:110595512-110615458	3	-	110595512	110595512	789624	2	296,152,	0,19794,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	110603360	110615415	chr4:110603360-110615415	1	-	110603360	110603360	789624	4	72,223,89,109,	0,690,2849,11946,
#Deleted in new
chr4	110617422	110623098	chr4:110617422-110623098	3	-	110618124	110622460	0	3	1266,206,843,	0,3741,4833,
#Deleted in new
chr4	110617422	110637352	chr4:110617422-110637352	1	-	110618124	110632998	0	4	1266,206,56,572,	0,3741,15530,19358,
#Deleted in new
chr4	110617422	110637011	chr4:110617422-110637011	1	-	110618124	110632998	0	5	1266,206,138,56,231,	0,3741,14920,15530,19358,
#Deleted in new
chr4	110617422	110637020	chr4:110617422-110637020	1	-	110618124	110632998	0	5	1266,206,138,56,240,	0,3741,14920,15530,19358,
#Deleted in new
chr4	110617422	110623077	chr4:110617422-110623077	1	-	110618124	110622460	0	3	1266,206,822,	0,3741,4833,
#Deleted in new
chr4	110617422	110621734	chr4:110617422-110621734	0	-	110617422	110617422	8553170	3	1266,206,136,	0,3741,4176,
#Deleted in new
chr4	110617423	110623125	chr4:110617423-110623125	0	-	110617423	110617423	8553170	4	1265,206,112,135,	0,3740,4832,5567,
#Deleted in new
chr4	110617425	110642006	chr4:110617425-110642006	1	-	110618124	110632998	0	7	1263,206,138,56,234,1374,88,	0,3738,14917,15527,16732,19355,24493,
#Deleted in new
chr4	110617427	110642123	chr4:110617427-110642123	1	-	110618124	110632998	0	6	1261,206,138,56,1374,205,	0,3736,14915,15525,19353,24491,
#Deleted in new
chr4	110617427	110642123	chr4:110617427-110642123	1	-	110618124	110632998	0	5	1261,206,138,56,205,	0,3736,14915,15525,24491,
#Deleted in new
chr4	110617427	110642123	chr4:110617427-110642123	1	-	110618124	110632998	0	5	1261,206,56,1374,205,	0,3736,15525,19353,24491,
#Deleted in new
chr4	110617428	110618826	chr4:110617428-110618826	0	-	110617428	110617428	8553170	1	1398,	0,
#Deleted in new
chr4	110618208	110642123	chr4:110618208-110642123	0	-	110618208	110632998	789624	5	480,206,138,56,205,	0,2955,14134,14744,23710,
#Deleted in new
chr4	110618464	110620716	chr4:110618464-110620716	0	-	110618464	110618464	8553170	2	224,717,	0,1535,
#Deleted in new
chr4	110618585	110642016	chr4:110618585-110642016	0	-	110618585	110632998	789624	4	103,206,56,98,	0,2578,14367,23333,
#Deleted in new
chr4	110620276	110623051	chr4:110620276-110623051	1	-	110620779	110622460	789624	2	1093,796,	0,1979,
#Deleted in new
chr4	110794402	110797344	chr4:110794402-110797344	3	+	110794402	110794402	8553170	2	72,484,	0,2458,
#Deleted in new
chr4	110860581	110860647	chr4:110860581-110860647	3	-	110860581	110860581	5263520	1	66,	0,
#Deleted in new
chr4	110945108	110945799	chr4:110945108-110945799	7	-	110945108	110945108	16724991	1	691,	0,
#Deleted in new
chr4	111063582	111064227	chr4:111063582-111064227	7	+	111063582	111063582	16724991	1	645,	0,
#Partially deleted in new
chr4	111331411	111331518	chr4:111331411-111331518	3	+	111331411	111331411	8553170	1	107,	0,
#Deleted in new
chr4	111551853	111552173	chr4:111551853-111552173	7	+	111551853	111551853	16724991	1	320,	0,
#Partially deleted in new
chr4	111640494	111648808	chr4:111640494-111648808	3	+	111640494	111640494	8553170	4	28,135,117,330,	0,1746,5060,7984,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	111804417	111809694	chr4:111804417-111809694	3	-	111804417	111804417	8553170	2	176,124,	0,5153,
#Deleted in new
chr4	112068009	112068526	chr4:112068009-112068526	7	+	112068009	112068009	16724991	1	517,	0,
#Deleted in new
chr4	112077597	112078400	chr4:112077597-112078400	7	+	112077597	112077597	16724991	1	803,	0,
#Deleted in new
chr4	112116509	112116903	chr4:112116509-112116903	7	-	112116509	112116509	16724991	1	394,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	112145396	112195256	chr4:112145396-112195256	3	+	112145580	112186938	789624	2	337,8564,	0,41296,
#Deleted in new
chr4	112171214	112171527	chr4:112171214-112171527	7	+	112171214	112171214	16724991	1	313,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	112229560	112231596	chr4:112229560-112231596	3	-	112229560	112229560	8553170	1	2036,	0,
#Partially deleted in new
chr4	112231736	112270047	chr4:112231736-112270047	3	+	112232091	112268409	789624	10	438,49,27,26,97,99,59,74,129,1904,	0,21471,23010,26035,29029,31251,33272,33997,34851,36407,
#Partially deleted in new
chr4	112231739	112265319	chr4:112231739-112265319	0	+	112231739	112231739	8553170	7	435,49,27,26,97,99,311,	0,21468,23007,26032,29026,31248,33269,
#Partially deleted in new
chr4	112231824	112254894	chr4:112231824-112254894	0	+	112231824	112231824	8553170	3	350,49,148,	0,21383,22922,
#Partially deleted in new
chr4	112231832	112269677	chr4:112231832-112269677	1	+	112232091	112268409	789624	9	342,49,27,26,97,59,74,129,1534,	0,21375,22914,25939,28933,33176,33901,34755,36311,
#Partially deleted in new
chr4	112231888	112253311	chr4:112231888-112253311	0	+	112231888	112231888	8553170	2	286,104,	0,21319,
#Deleted in new
chr4	112265051	112266830	chr4:112265051-112266830	0	+	112265051	112266727	789624	3	16,74,243,	0,682,1536,
#Deleted in new
chr4	112272967	112273316	chr4:112272967-112273316	3	-	112272967	112272967	8553170	1	349,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	112274541	112285903	chr4:112274541-112285903	3	-	112277861	112278416	0	2	3893,264,	0,11098,
#Partially deleted in new
chr4	112277758	112281773	chr4:112277758-112281773	1	-	112277861	112278416	0	2	676,93,	0,3922,
#Partially deleted in new
chr4	112285508	112315851	chr4:112285508-112315851	0	+	112285508	112285508	8553170	2	253,51,	0,30292,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr4	112297342	112442606	chr4:112297342-112442606	3	+	112377777	112441210	789624	16	127,52,221,155,199,60,87,77,96,105,2134,154,163,187,189,1404,	0,18458,80335,85055,114484,126601,128322,129124,130227,131806,133105,137805,141141,142343,143574,143860,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	112297342	112442606	chr4:112297342-112442606	1	+	112377856	112441210	789624	15	127,52,169,199,60,87,77,96,105,2134,154,163,187,189,1404,	0,18458,80387,114484,126601,128322,129124,130227,131806,133105,137805,141141,142343,143574,143860,
#Partially deleted in new
chr4	112297368	112343276	chr4:112297368-112343276	0	+	112297368	112297368	8553170	4	101,147,52,265,	0,4970,18432,45643,
#Partially deleted in new
chr4	112297369	112441812	chr4:112297369-112441812	1	+	112377777	112441210	789624	16	100,52,169,155,199,60,87,77,96,105,2134,154,163,187,189,610,	0,18431,80360,85028,114457,126574,128295,129097,130200,131779,133078,137778,141114,142316,143547,143833,
#Partially deleted in new
chr4	112297378	112343584	chr4:112297378-112343584	0	+	112297378	112297378	8553170	3	91,52,573,	0,18422,45633,
#Partially deleted in new
chr4	112297379	112441371	chr4:112297379-112441371	0	+	112377777	112425686	789624	15	90,52,169,199,60,87,77,96,105,2134,154,163,187,189,169,	0,18421,80350,114447,126564,128285,129087,130190,131769,133068,137768,141104,142306,143537,143823,
#Partially deleted in new
chr4	112297381	112441664	chr4:112297381-112441664	0	+	112377777	112435162	789624	15	88,52,221,155,199,60,87,77,96,105,154,163,187,189,462,	0,18419,80296,85016,114445,126562,128283,129085,130188,131767,137766,141102,142304,143535,143821,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	112297384	112316305	chr4:112297384-112316305	0	+	112297384	112297384	8553170	2	85,505,	0,18416,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	112297390	112384846	chr4:112297390-112384846	0	+	112297390	112297390	8553170	4	79,52,169,2449,	0,18410,80339,85007,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	112297395	112353012	chr4:112297395-112353012	0	+	112297395	112297395	8553170	4	74,70,52,353,	0,4943,18405,55264,
#Partially deleted in new
chr4	112297395	112425693	chr4:112297395-112425693	0	+	112377777	112423757	789624	7	74,52,221,155,199,278,29,	0,18405,80282,85002,114431,126330,128269,
#Partially deleted in new
chr4	112297400	112412445	chr4:112297400-112412445	0	+	112377777	112412427	789624	5	69,52,221,199,28,	0,18400,80277,114426,115017,
#Deleted in new
chr4	112356134	112359819	chr4:112356134-112359819	7	+	112356134	112356134	16724991	1	3685,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	112382503	112442620	chr4:112382503-112442620	0	+	112382503	112382503	8553170	12	49,199,60,879,96,105,2134,154,163,187,189,1418,	0,29323,41440,43161,45066,46645,47944,52644,55980,57182,58413,58699,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	112410914	112415117	chr4:112410914-112415117	0	+	112410914	112410914	8553170	3	131,303,853,	0,808,3350,
#Partially deleted in new
chr4	112423787	112425963	chr4:112423787-112425963	0	+	112423787	112423787	8553170	2	216,299,	0,1877,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	112425050	112427649	chr4:112425050-112427649	0	+	112425050	112425050	8553170	4	333,87,77,80,	0,614,1416,2519,
#Deleted in new
chr4	112426505	112428111	chr4:112426505-112428111	0	+	112426505	112426505	8553170	2	38,542,	0,1064,
#Deleted in new
chr4	112455923	112457785	chr4:112455923-112457785	7	+	112455923	112455923	16724991	1	1862,	0,
#Deleted in new
chr4	112513515	112516172	chr4:112513515-112516172	3	-	112514656	112515475	789624	2	1961,326,	0,2331,
#Partially deleted in new
chr4	112515384	112518236	chr4:112515384-112518236	1	+	112515384	112515384	8553170	2	256,429,	0,2423,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	112515430	112546881	chr4:112515430-112546881	3	+	112515430	112515430	8553170	4	210,51,119,97,	0,9828,14951,31354,
#Deleted in new
chr4	112530370	112530672	chr4:112530370-112530672	7	-	112530370	112530370	16724991	1	302,	0,
#Partially deleted in new
chr4	112539332	112633176	chr4:112539332-112633176	1	-	112539546	112633176	789624	27	357,262,135,177,124,128,148,78,160,263,115,144,140,197,185,139,650,151,174,84,51,65,2251,189,60,81,21,	0,530,1488,1759,7952,8920,14502,15372,18817,21400,23038,23798,42330,44645,46208,47112,47947,50391,64191,66675,70046,73191,78107,80669,84484,92597,93823,
#Partially deleted in new
chr4	112539335	112636910	chr4:112539335-112636910	3	-	112539546	112633176	789624	28	354,262,135,177,124,128,148,78,160,263,115,144,140,197,185,139,650,151,174,84,51,65,2251,189,60,81,87,60,	0,527,1485,1756,7949,8917,14499,15369,18814,21397,23035,23795,42327,44642,46205,47109,47944,50388,64188,66672,70043,73188,78104,80666,84481,92594,93820,97515,
#Partially deleted in new
chr4	112539338	112587750	chr4:112539338-112587750	0	-	112547402	112587750	789624	16	351,262,135,177,124,148,78,160,263,115,144,140,197,185,139,471,	0,524,1482,1753,7946,14496,15366,18811,21394,23032,23792,42324,44639,46202,47106,47941,
#Partially deleted in new
chr4	112539343	112584061	chr4:112539343-112584061	1	-	112539546	112547287	789624	13	346,262,135,177,124,148,78,160,263,115,144,140,84,	0,519,1477,1748,7941,14491,15361,18806,21389,23027,23787,42319,44634,
#Partially deleted in new
chr4	112539428	112561538	chr4:112539428-112561538	0	-	112539428	112539428	8553170	10	261,262,135,177,124,128,148,78,160,806,	0,434,1392,1663,7856,8824,14406,15276,18721,21304,
#Partially deleted in new
chr4	112562272	112636903	chr4:112562272-112636903	0	-	112587923	112633176	789624	16	213,144,140,197,185,139,650,84,51,65,2251,189,60,81,87,53,	0,858,19390,21705,23268,24172,25007,43735,47106,50251,55167,57729,61544,69657,70883,74578,
#Deleted in new
chr4	112564987	112565398	chr4:112564987-112565398	7	+	112564987	112564987	16724991	1	411,	0,
#Partially deleted in new
chr4	112589629	112636910	chr4:112589629-112636910	1	-	112589661	112633176	789624	11	245,174,84,51,65,2251,189,60,81,87,60,	0,13894,16378,19749,22894,27810,30372,34187,42300,43526,47221,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	112605559	112636995	chr4:112605559-112636995	0	-	112605559	112605559	8553170	10	532,122,51,65,2251,189,60,81,87,145,	0,2256,3819,6964,11880,14442,18257,26370,27596,31291,
#Partially deleted in new
chr4	112610706	112636989	chr4:112610706-112636989	0	-	112628836	112633176	789624	9	313,65,2251,189,60,231,81,87,139,	0,1817,6733,9295,13110,17914,21223,22449,26144,
#Partially deleted in new
chr4	112619517	112636898	chr4:112619517-112636898	0	-	112619517	112633176	789624	6	173,189,60,81,87,204,	0,484,4299,12412,13638,17177,
#Partially deleted in new
chr4	112619524	112623977	chr4:112619524-112623977	0	-	112619524	112619524	8553170	3	166,189,161,	0,477,4292,
#Partially deleted in new
chr4	112636963	112657586	chr4:112636963-112657586	3	+	112644669	112657327	0	13	276,204,101,84,165,94,351,145,152,122,160,92,340,	0,7704,9387,9624,9827,10070,10235,10726,12571,13497,16113,17104,20283,
#Partially deleted in new
chr4	112637106	112646593	chr4:112637106-112646593	0	+	112644669	112645654	789624	5	133,204,112,101,6,	0,7561,8444,9244,9481,
#Partially deleted in new
chr4	112637125	112657586	chr4:112637125-112657586	1	+	112644469	112657327	0	15	114,144,64,204,101,84,165,94,351,145,152,122,160,92,340,	0,518,7299,7542,9225,9462,9665,9908,10073,10564,12409,13335,15951,16942,20121,
#Partially deleted in new
chr4	112637126	112657586	chr4:112637126-112657586	0	+	112644669	112646389	789624	13	113,101,101,84,165,94,351,145,152,122,160,92,340,	0,7541,9224,9461,9664,9907,10072,10563,12408,13334,15950,16941,20120,
#Partially deleted in new
chr4	112637164	112646642	chr4:112637164-112646642	0	+	112644669	112646642	789624	5	75,144,204,101,55,	0,479,7503,9186,9423,
#Partially deleted in new
chr4	112637180	112653123	chr4:112637180-112653123	0	+	112644669	112653123	789624	6	59,32,116,152,122,47,	0,7487,10538,12354,13280,15896,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	112637192	112638020	chr4:112637192-112638020	0	+	112637192	112637192	8553170	2	47,377,	0,451,
#Partially deleted in new
chr4	112637455	112657592	chr4:112637455-112657592	1	+	112644669	112657327	0	13	148,204,101,84,165,94,351,145,152,122,160,92,346,	0,7212,8895,9132,9335,9578,9743,10234,12079,13005,15621,16612,19791,
#Partially deleted in new
chr4	112637455	112647449	chr4:112637455-112647449	0	+	112644669	112647449	789624	7	148,204,101,84,165,94,251,	0,7212,8895,9132,9335,9578,9743,
#Partially deleted in new
chr4	112637524	112646902	chr4:112637524-112646902	0	+	112644669	112646389	789624	5	79,101,101,84,112,	0,7143,8826,9063,9266,
#Partially deleted in new
chr4	112644303	112646671	chr4:112644303-112646671	0	+	112644669	112646671	789624	3	568,101,84,	0,2047,2284,
#Deleted in new
chr4	112646475	112650051	chr4:112646475-112650051	3	-	112646475	112646475	8553170	3	493,87,60,	0,2037,3516,
#Deleted in new
chr4	112646722	112648699	chr4:112646722-112648699	0	-	112646722	112646722	789624	3	246,53,46,	0,692,1931,
#Deleted in new
chr4	112646724	112648703	chr4:112646724-112648703	0	-	112646724	112646724	8553170	2	244,50,	0,1929,
#Deleted in new
chr4	112646889	112647338	chr4:112646889-112647338	0	+	112646889	112646889	8553170	3	66,75,137,	0,163,312,
#Partially deleted in new
chr4	112647210	112654113	chr4:112647210-112654113	0	+	112647210	112654113	789624	6	339,184,152,122,160,46,	0,440,2324,3250,5866,6857,
#Deleted in new
chr4	112647873	112647941	chr4:112647873-112647941	3	-	112647873	112647873	5263520	1	68,	0,
#Deleted in new
chr4	112648003	112648071	chr4:112648003-112648071	3	-	112648003	112648003	5263520	1	68,	0,
#Deleted in new
chr4	112648182	112648251	chr4:112648182-112648251	3	-	112648182	112648182	5263520	1	69,	0,
#Deleted in new
chr4	112648362	112648430	chr4:112648362-112648430	3	-	112648362	112648362	5263520	1	68,	0,
#Deleted in new
chr4	112648484	112648557	chr4:112648484-112648557	3	-	112648484	112648484	5263520	1	73,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	112653097	112654762	chr4:112653097-112654762	0	+	112653097	112653097	8553170	2	139,695,	0,970,
#Partially deleted in new
chr4	112655362	112657592	chr4:112655362-112657592	0	+	112655362	112655362	8553170	2	148,346,	0,1884,
#Deleted in new
chr4	112685054	112685503	chr4:112685054-112685503	7	+	112685054	112685054	16724991	1	449,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	112693046	112706810	chr4:112693046-112706810	3	-	112693046	112693046	8553170	2	639,101,	0,13663,
#Deleted in new
chr4	112693458	112693792	chr4:112693458-112693792	7	-	112693458	112693458	16724991	1	334,	0,
#Partially deleted in new
chr4	112738671	112739106	chr4:112738671-112739106	7	+	112738671	112738671	16724991	1	435,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	112755815	112755917	chr4:112755815-112755917	3	-	112755815	112755815	8553170	1	102,	0,
#Deleted in new
chr4	112788082	112788878	chr4:112788082-112788878	7	-	112788082	112788082	16724991	1	796,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	112797049	112798691	chr4:112797049-112798691	7	-	112797049	112797049	16724991	2	1248,104,	0,1538,
#Partially deleted in new
chr4	112818108	113335871	chr4:112818108-113335871	0	+	112904493	113335871	789624	31	156,60,102,99,99,99,186,24,99,99,99,198,99,99,99,198,99,99,198,99,99,99,99,73,145,103,104,225,99,155,26,	0,86346,356307,378259,380902,414052,418878,419490,422376,424002,431655,437626,439941,440204,446788,456343,459728,460351,464566,469496,470279,474307,475331,484658,493146,499598,500408,512137,513863,514945,517737,
#Partially deleted in new
chr4	112818108	113353713	chr4:112818108-113353713	2	+	112904493	113353713	789624	37	156,60,102,99,99,99,186,24,99,99,99,198,99,99,99,198,99,198,99,99,99,99,73,145,103,104,225,155,212,205,97,229,126,123,33,22,669,	0,86346,356307,378259,380902,414052,418878,419490,422376,424002,431655,437626,439941,440204,446788,456343,459728,464566,469496,470279,474307,475331,484658,493146,499598,500408,512137,514945,517737,518468,521117,523579,524908,527791,530167,532119,534936,
#Partially deleted in new
chr4	112818108	113383735	chr4:112818108-113383735	1	+	112904493	113381471	0	47	156,60,102,99,99,99,186,24,99,99,99,198,99,99,99,198,99,99,198,99,99,99,99,73,145,103,104,36,225,99,155,212,205,97,229,126,123,33,22,75,132,144,286,292,84,165,2279,	0,86346,356307,378259,380902,414052,418878,419490,422376,424002,431655,437626,439941,440204,446788,456343,459728,460351,464566,469496,470279,474307,475331,484658,493146,499598,500408,505650,512137,513863,514945,517737,518468,521117,523579,524908,527791,530167,532119,542714,545229,546930,549457,551405,554981,555176,563348,
#Deleted in new
chr4	112826306	112827607	chr4:112826306-112827607	7	+	112826306	112826306	16724991	1	1301,	0,
#Partially deleted in new
chr4	112880297	112882330	chr4:112880297-112882330	3	-	112880297	112880297	8553170	2	561,313,	0,1720,
#Deleted in new
chr4	112881717	112882132	chr4:112881717-112882132	7	-	112881717	112881717	16724991	1	415,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	112979589	113071962	chr4:112979589-113071962	3	-	112979589	112979589	8553170	3	939,112,125,	0,55093,92248,
#Deleted in new
chr4	113031286	113034551	chr4:113031286-113034551	3	-	113031286	113031286	8553170	3	193,208,26,	0,2534,3239,
#Partially deleted in new
chr4	113049649	113353764	chr4:113049649-113353764	0	+	113049728	113353764	789624	39	163,45,102,99,99,99,186,24,99,99,99,198,99,99,99,198,99,99,198,99,99,99,99,73,145,103,104,225,99,155,212,205,97,229,126,123,33,22,720,	0,101430,124766,146718,149361,182511,187337,187949,190835,192461,200114,206085,208400,208663,215247,224802,228187,228810,233025,237955,238738,242766,243790,253117,261605,268057,268867,280596,282322,283404,286196,286927,289576,292038,293367,296250,298626,300578,303395,
#Partially deleted in new
chr4	113049655	113070150	chr4:113049655-113070150	0	+	113049655	113049655	8553170	2	157,241,	0,20254,
#Partially deleted in new
chr4	113049675	113383740	chr4:113049675-113383740	1	+	113049728	113381471	0	46	137,102,99,99,99,186,24,99,99,99,198,99,99,99,198,99,99,198,99,99,99,99,73,145,103,104,225,99,155,212,205,97,229,126,123,33,22,6255,75,132,144,286,292,84,165,2284,	0,124740,146692,149335,182485,187311,187923,190809,192435,200088,206059,208374,208637,215221,224776,228161,228784,232999,237929,238712,242740,243764,253091,261579,268031,268841,280570,282296,283378,286170,286901,289550,292012,293341,296224,298600,300552,303369,311147,313662,315363,317890,319838,323414,323609,331781,
#Partially deleted in new
chr4	113049675	113382112	chr4:113049675-113382112	1	+	113049728	113381471	0	45	137,102,99,99,99,186,24,99,99,99,198,99,99,99,198,99,99,198,99,99,99,99,73,145,103,104,225,99,155,212,205,97,229,126,123,33,22,75,132,144,286,292,84,165,656,	0,124740,146692,149335,182485,187311,187923,190809,192435,200088,206059,208374,208637,215221,224776,228161,228784,232999,237929,238712,242740,243764,253091,261579,268031,268841,280570,282296,283378,286170,286901,289550,292012,293341,296224,298600,300552,311147,313662,315363,317890,319838,323414,323609,331781,
#Partially deleted in new
chr4	113049728	113381471	chr4:113049728-113381471	1	+	113049728	113381471	789624	45	84,102,99,99,99,186,24,99,99,99,198,99,99,99,198,99,99,198,99,99,99,99,73,145,103,104,225,155,212,205,97,229,126,123,33,22,6255,75,132,144,286,292,84,165,15,	0,124687,146639,149282,182432,187258,187870,190756,192382,200035,206006,208321,208584,215168,224723,228108,228731,232946,237876,238659,242687,243711,253038,261526,267978,268788,280517,283325,286117,286848,289497,291959,293288,296171,298547,300499,303316,311094,313609,315310,317837,319785,323361,323556,331728,
#Deleted in new
chr4	113106862	113106955	chr4:113106862-113106955	3	+	113106862	113106862	5263520	1	93,	0,
#Partially deleted in new
chr4	113116992	113236990	chr4:113116992-113236990	0	+	113117289	113236990	789624	6	426,102,99,99,99,4,	0,57423,79375,82018,115168,119994,
#Partially deleted in new
chr4	113141248	113151208	chr4:113141248-113151208	0	+	113141248	113141248	8553170	3	169,116,129,	0,7841,9831,
#Partially deleted in new
chr4	113145631	113196466	chr4:113145631-113196466	0	+	113145868	113196466	789624	3	372,102,99,	0,28784,50736,
#Partially deleted in new
chr4	113152281	113152362	chr4:113152281-113152362	3	+	113152281	113152281	5263520	1	81,	0,
#Partially deleted in new
chr4	113174017	113237105	chr4:113174017-113237105	0	+	113232181	113237105	789624	6	27,102,99,99,99,119,	0,398,22350,24993,58143,62969,
#Partially deleted in new
chr4	113174415	113336656	chr4:113174415-113336656	0	+	113174415	113336656	789624	31	102,99,99,99,186,24,99,99,99,198,99,99,99,198,99,99,198,99,99,99,99,73,145,12,88,104,225,99,155,212,80,	0,21952,24595,57745,62571,63183,66069,67695,75348,81319,83634,83897,90481,100036,103421,104044,108259,113189,113972,118000,119024,128351,136839,139268,143306,144101,155830,157556,158638,161430,162161,
#Deleted in new
chr4	113214045	113214393	chr4:113214045-113214393	5	-	113214045	113214045	16724991	1	348,	0,
#Partially deleted in new
chr4	113214259	113217170	chr4:113214259-113217170	7	-	113214259	113214259	16724991	2	169,115,	0,2796,
#Partially deleted in new
chr4	113292981	113381647	chr4:113292981-113381647	1	+	113293296	113381471	789624	24	318,99,73,145,103,104,225,155,212,205,97,229,126,123,33,22,75,132,144,286,292,84,165,191,	0,458,9785,18273,24725,25535,37264,40072,42864,43595,46244,48706,50035,52918,55294,57246,67841,70356,72057,74584,76532,80108,80303,88475,
#Partially deleted in new
chr4	113293359	113318606	chr4:113293359-113318606	0	+	113293359	113293359	8553170	5	179,73,145,103,90,	0,9407,17895,24347,25157,
#Partially deleted in new
chr4	113317451	113330363	chr4:113317451-113330363	0	+	113317451	113317451	8553170	3	358,104,118,	0,1065,12794,
#Partially deleted in new
chr4	113318584	113383732	chr4:113318584-113383732	0	+	113318584	113381471	789624	20	36,225,155,212,205,97,229,126,123,22,75,132,144,286,292,93,84,165,183,2276,	0,11661,14469,17261,17992,20641,23103,24432,27315,31643,42238,44753,46454,48981,50929,53948,54505,54700,56179,62872,
#Deleted in new
chr4	113332981	113336593	chr4:113332981-113336593	0	+	113332981	113332981	8553170	3	227,212,17,	0,2864,3595,
#Partially deleted in new
chr4	113336343	113341818	chr4:113336343-113341818	0	+	113336343	113336343	8553170	4	123,205,97,131,	0,233,2882,5344,
#Partially deleted in new
chr4	113341711	113363440	chr4:113341711-113363440	0	+	113341711	113363440	789624	6	205,123,33,22,75,103,	0,4188,6564,8516,19111,21626,
#Partially deleted in new
chr4	113341832	113381567	chr4:113341832-113381567	1	+	113341838	113381471	0	14	84,126,123,33,22,75,132,144,286,292,93,84,165,111,	0,1184,4067,6443,8395,18990,21505,23206,25733,27681,30700,31257,31452,39624,
#Partially deleted in new
chr4	113347795	113365136	chr4:113347795-113365136	0	+	113347795	113347795	8553170	5	513,22,75,132,98,	0,2432,13027,15542,17243,
#Deleted in new
chr4	113348257	113350811	chr4:113348257-113350811	0	+	113348257	113348257	8553170	2	51,584,	0,1970,
#Partially deleted in new
chr4	113355716	113383729	chr4:113355716-113383729	1	+	113356712	113357257	789624	11	42,584,2057,75,132,144,286,292,84,165,2273,	0,940,1526,5106,7621,9322,11849,13797,17373,17568,25740,
#Partially deleted in new
chr4	113357588	113383740	chr4:113357588-113383740	0	+	113357588	113381471	789624	10	1711,75,132,144,286,292,84,165,183,2284,	0,3234,5749,7450,9977,11925,15501,15696,17175,23868,
#Partially deleted in new
chr4	113373316	113381943	chr4:113373316-113381943	0	+	113373316	113381640	789624	4	133,183,92,487,	0,1447,4773,8140,
#Partially deleted in new
chr4	113373358	113381516	chr4:113373358-113381516	0	+	113373358	113381516	789624	3	91,92,60,	0,4731,8098,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	113419839	113420136	chr4:113419839-113420136	3	+	113419839	113419839	8553170	1	297,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr4	113451031	113761927	chr4:113451031-113761927	1	-	113457330	113761068	0	18	3484,273,95,76,49,38,43,84,123,95,84,103,73,66,55,60,95,924,	0,6259,9115,14497,49431,58606,62296,62798,64037,66531,80184,86309,97625,100999,158120,210681,308288,309972,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr4	113451031	113761445	chr4:113451031-113761445	1	-	113454511	113761068	0	18	3484,229,95,76,49,38,43,84,123,95,84,103,73,66,55,60,95,442,	0,6303,9115,14497,49431,58606,62296,62798,64037,66531,80184,86309,97625,100999,158120,210681,308288,309972,
#Partially deleted in new
chr4	113452960	113513842	chr4:113452960-113513842	0	-	113457330	113513842	789624	8	1555,273,95,76,49,38,43,13,	0,4330,7186,12568,47502,56677,60367,60869,
#Partially deleted in new
chr4	113454086	113761218	chr4:113454086-113761218	1	-	113455754	113761068	789624	21	429,96,229,95,76,49,42,60,38,43,84,123,95,84,103,73,66,55,60,95,215,	0,1639,3248,6060,11442,46376,48849,50889,55551,59241,59743,60982,63476,77129,83254,93557,97944,155065,207626,305233,306917,
#Partially deleted in new
chr4	113454104	113761068	chr4:113454104-113761068	3	-	113455754	113761068	0	19	411,96,229,95,76,49,38,43,84,123,95,84,103,73,66,55,60,95,65,	0,1621,3230,6042,11424,46358,55533,59223,59725,60964,63458,77111,83236,94552,97926,155047,207608,305215,306899,
#Partially deleted in new
chr4	113455754	113761068	chr4:113455754-113761068	1	-	113455754	113761068	789624	18	67,229,95,76,49,35,43,84,123,95,84,103,73,66,55,60,95,65,	0,1580,4392,9774,44708,53883,57573,58075,59314,61808,75461,81586,92902,96276,153397,205958,303565,305249,
#Partially deleted in new
chr4	113455754	113761068	chr4:113455754-113761068	1	-	113455754	113761068	0	19	67,229,95,76,49,33,38,43,84,123,95,84,103,73,66,55,60,95,65,	0,1580,4392,9774,44708,52481,53883,57573,58075,59314,61808,75461,81586,92902,96276,153397,205958,303565,305249,
#Partially deleted in new
chr4	113456608	113761563	chr4:113456608-113761563	1	-	113457330	113761068	0	18	955,95,76,49,42,38,43,84,123,95,84,103,73,66,55,60,95,560,	0,3538,8920,43854,46327,53029,56719,57221,58460,60954,74607,80732,92048,95422,152543,205104,302711,304395,
#Partially deleted in new
chr4	113457182	113761183	chr4:113457182-113761183	1	-	113457330	113761068	789624	19	381,95,76,49,42,60,38,43,84,123,95,84,103,73,66,55,60,95,180,	0,2964,8346,43280,45753,47793,52455,56145,56647,57886,60380,74033,80158,90461,94848,151969,204530,302137,303821,
#Partially deleted in new
chr4	113457187	113761130	chr4:113457187-113761130	1	-	113457330	113761068	0	17	376,95,76,49,38,43,84,123,95,84,103,73,66,55,60,95,127,	0,2959,8341,43275,52450,56140,56642,57881,60375,74028,80153,91469,94843,151964,204525,302132,303816,
#Partially deleted in new
chr4	113457330	113761068	chr4:113457330-113761068	1	-	113457330	113761068	0	18	233,95,76,49,33,38,43,84,123,95,84,103,73,66,55,60,95,65,	0,2816,8198,43132,50905,52307,55997,56499,57738,60232,73885,80010,91326,94700,151821,204382,301989,303673,
#Partially deleted in new
chr4	113460146	113517643	chr4:113460146-113517643	0	-	113460146	113517643	789624	8	95,76,46,35,43,84,123,81,	0,5382,40316,49491,53181,53683,54922,57416,
#Partially deleted in new
chr4	113754738	113761416	chr4:113754738-113761416	0	-	113754738	113754738	8553170	3	352,95,413,	0,4581,6265,
#Deleted in new
chr4	113759114	113761451	chr4:113759114-113761451	0	-	113759114	113759114	8553170	2	300,448,	0,1889,
#Deleted in new
chr4	113840049	113840236	chr4:113840049-113840236	7	+	113840049	113840049	16724991	2	118,37,	0,150,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	113900283	113979701	chr4:113900283-113979701	3	-	113902273	113978834	789624	2	3392,1265,	0,78153,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	113903504	113979611	chr4:113903504-113979611	0	-	113903504	113903504	8553170	4	171,36,122,241,	0,66970,67325,75866,
#Deleted in new
chr4	113943255	113944320	chr4:113943255-113944320	3	+	113943255	113943255	8553170	2	248,193,	0,872,
#Partially deleted in new
chr4	113946191	113979727	chr4:113946191-113979727	0	-	113946191	113946191	8553170	3	224,36,1291,	0,24283,32245,
#Deleted in new
chr4	114103937	114104225	chr4:114103937-114104225	7	+	114103937	114103937	16724991	2	43,237,	0,51,
#Partially deleted in new
chr4	114598454	114678224	chr4:114598454-114678224	3	+	114622880	114676288	789624	6	520,824,143,77,220,2300,	0,24424,65540,67225,69630,77470,
#Partially deleted in new
chr4	114598769	114623305	chr4:114598769-114623305	0	+	114622880	114623305	789624	3	205,103,427,	0,20653,24109,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	114622366	114676596	chr4:114622366-114676596	1	+	114622880	114676288	789624	5	1336,143,77,220,672,	0,41628,43313,45718,53558,
#Deleted in new
chr4	114656758	114656854	chr4:114656758-114656854	3	+	114656758	114656758	5263520	1	96,	0,
#Deleted in new
chr4	114713578	114714920	chr4:114713578-114714920	7	-	114713578	114713578	16724991	1	1342,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	114799330	114799629	chr4:114799330-114799629	3	+	114799330	114799330	8553170	1	299,	0,
#Partially deleted in new
chr4	114827762	115113876	chr4:114827762-115113876	3	-	114827815	115077036	789624	14	173,103,110,171,175,124,97,183,129,186,155,88,1224,433,	0,2027,5843,11615,18060,20452,24962,43005,107443,109555,142667,149424,248296,285681,
#Partially deleted in new
chr4	114935047	115113849	chr4:114935047-115113849	0	-	114935047	114935047	8553170	6	287,186,112,155,88,406,	0,2270,20811,35382,42139,178396,
#Deleted in new
chr4	115142981	115143303	chr4:115142981-115143303	7	+	115142981	115142981	16724991	1	322,	0,
#Deleted in new
chr4	115628811	115629707	chr4:115628811-115629707	7	+	115628811	115628811	16724991	1	896,	0,
#Deleted in new
chr4	115764098	115764819	chr4:115764098-115764819	7	-	115764098	115764098	16724991	1	721,	0,
#Deleted in new
chr4	115920706	115921978	chr4:115920706-115921978	7	+	115920706	115920706	16724991	1	1272,	0,
#Partially deleted in new
chr4	115922014	116297160	chr4:115922014-116297160	7	-	115922014	115922014	16724991	3	121,134,202,	0,274589,374944,
#Deleted in new
chr4	116043406	116044045	chr4:116043406-116044045	7	-	116043406	116043406	16724991	1	639,	0,
#Deleted in new
chr4	116095109	116097066	chr4:116095109-116097066	5	-	116095109	116095109	16724991	1	1957,	0,
#Partially deleted in new
chr4	116096290	116297157	chr4:116096290-116297157	4	-	116096290	116096290	16724991	3	383,134,199,	0,100313,200668,
#Deleted in new
chr4	116193996	116194751	chr4:116193996-116194751	7	-	116193996	116193996	16724991	1	755,	0,
#Deleted in new
chr4	116298875	116300320	chr4:116298875-116300320	3	+	116299800	116299875	789624	1	1445,	0,
#Deleted in new
chr4	116299724	116299768	chr4:116299724-116299768	3	+	116299724	116299724	5263520	1	44,	0,
#Deleted in new
chr4	116378918	116379269	chr4:116378918-116379269	7	+	116378918	116378918	16724991	1	351,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	116489363	116515146	chr4:116489363-116515146	3	-	116489363	116489363	8553170	5	110,78,95,89,34,	0,710,12304,25081,25749,
#Deleted in new
chr4	116490075	116491200	chr4:116490075-116491200	0	-	116490075	116490075	8553170	2	76,62,	0,1063,
#Deleted in new
chr4	116598160	116599611	chr4:116598160-116599611	7	+	116598160	116598160	16724991	1	1451,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	116839278	116839385	chr4:116839278-116839385	3	+	116839278	116839278	8553170	1	107,	0,
#Deleted in new
chr4	116858092	116858973	chr4:116858092-116858973	7	+	116858092	116858092	16724991	1	881,	0,
#Deleted in new
chr4	117083553	117085576	chr4:117083553-117085576	3	-	117084283	117085393	789624	1	2023,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	117249923	117250188	chr4:117249923-117250188	7	+	117249923	117249923	16724991	1	265,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	117360624	117372598	chr4:117360624-117372598	1	+	117360624	117360624	8553170	4	185,106,71,235,	0,776,10967,11739,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	117360665	117372852	chr4:117360665-117372852	3	+	117360665	117360665	789624	5	144,97,71,108,95,	0,744,10926,11698,12092,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	117361348	117372735	chr4:117361348-117372735	0	+	117361348	117361348	8553170	3	158,71,372,	0,10243,11015,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	117361399	117372735	chr4:117361399-117372735	0	+	117361399	117361399	8553170	4	107,71,108,140,	0,10192,10964,11196,
#Duplicated in new
chr4	117406165	117689027	chr4:117406165-117689027	0	+	117406165	117406165	8553170	4	200,116,104,92,	0,197377,248641,282770,
#Deleted in new
chr4	117413461	117414279	chr4:117413461-117414279	7	+	117413461	117413461	16724991	1	818,	0,
#Partially deleted in new
chr4	117571754	117689124	chr4:117571754-117689124	0	+	117571754	117571754	8553170	4	381,24,104,189,	0,5212,83052,117181,
#Partially deleted in new
chr4	117571832	117576418	chr4:117571832-117576418	0	+	117571832	117571832	8553170	3	60,102,3,	0,201,4583,
#Partially deleted in new
chr4	117572081	117654816	chr4:117572081-117654816	1	+	117572081	117572081	8553170	4	54,24,70,10,	0,4885,14899,82725,
#Deleted in new
chr4	117574511	117576174	chr4:117574511-117576174	7	-	117574511	117574511	16724991	1	1663,	0,
#Deleted in new
chr4	117575097	117576109	chr4:117575097-117576109	5	-	117575097	117575097	16724991	1	1012,	0,
#Partially deleted in new
chr4	117654809	117689123	chr4:117654809-117689123	0	+	117654809	117654809	8553170	3	101,106,188,	0,10967,34126,
#Partially deleted in new
chr4	118033617	118055645	chr4:118033617-118055645	0	+	118033617	118033617	8553170	2	294,1890,	0,20138,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr4	118034344	118258648	chr4:118034344-118258648	3	+	118053910	118255712	789624	14	248,1136,88,155,186,129,183,97,124,175,171,110,103,3056,	0,19411,70673,80461,103709,109211,190146,192541,198667,202701,206179,207695,219154,221248,
#Partially deleted in new
chr4	118193404	118194751	chr4:118193404-118194751	7	-	118193404	118193404	16724991	1	1347,	0,
#Deleted in new
chr4	118278708	118279823	chr4:118278708-118279823	3	+	118278708	118278708	789624	3	429,43,200,	0,680,915,
#Deleted in new
chr4	118278708	118279823	chr4:118278708-118279823	0	+	118278708	118278708	789624	3	84,43,200,	0,680,915,
#Deleted in new
chr4	118278754	118279820	chr4:118278754-118279820	1	+	118278754	118278754	8553170	4	38,31,43,197,	0,352,634,869,
#Deleted in new
chr4	118278757	118279821	chr4:118278757-118279821	1	+	118278757	118278757	789624	4	35,194,43,198,	0,186,631,866,
#Deleted in new
chr4	118279059	118279821	chr4:118279059-118279821	0	+	118279059	118279059	8553170	2	372,198,	0,564,
#Deleted in new
chr4	118279189	118279320	chr4:118279189-118279320	3	+	118279189	118279189	789624	1	131,	0,
#Partially deleted in new
chr4	118280037	118353003	chr4:118280037-118353003	3	-	118281935	118352720	789624	13	2206,281,123,79,206,142,197,142,179,151,179,139,785,	0,2793,14901,15740,18695,28398,33163,36144,38340,51678,55435,58138,72181,
#Partially deleted in new
chr4	118282938	118298775	chr4:118282938-118298775	0	-	118282938	118282938	8553170	3	173,79,43,	0,12839,15794,
#Partially deleted in new
chr4	118312945	118318555	chr4:118312945-118318555	0	-	118312945	118312945	8553170	3	452,142,178,	0,3236,5432,
#Deleted in new
chr4	118400513	118400834	chr4:118400513-118400834	7	-	118400513	118400513	16724991	1	321,	0,
#Deleted in new
chr4	118460223	118460301	chr4:118460223-118460301	7	-	118460223	118460223	16724991	1	78,	0,
#Partially deleted in new
chr4	118467589	118554100	chr4:118467589-118554100	7	+	118467589	118467589	16724991	17	79,59,163,135,477,164,294,150,127,1830,235,178,171,89,94,52,290,	0,11077,11232,12715,20538,25612,25962,39213,42314,45947,55621,70271,72629,76726,83489,84649,86221,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	118591772	118633729	chr4:118591772-118633729	7	+	118591772	118591772	16724991	10	123,111,132,236,65,124,65,191,58,3290,	0,4139,5321,13811,16885,26223,29690,36263,38516,38667,
#Deleted in new
chr4	118595911	118596049	chr4:118595911-118596049	5	+	118595911	118595911	16724991	1	138,	0,
#Deleted in new
chr4	118606449	118606553	chr4:118606449-118606553	3	+	118606449	118606449	8553170	1	104,	0,
#Deleted in new
chr4	118635969	118638782	chr4:118635969-118638782	7	-	118635969	118635969	16724991	1	2813,	0,
#Deleted in new
chr4	118640672	118640858	chr4:118640672-118640858	7	+	118640672	118640672	16724991	1	186,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	118664086	118684466	chr4:118664086-118684466	3	-	118664086	118664086	789624	6	1113,95,55,95,95,59,	0,9412,13203,13957,16402,20321,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	118673108	118685341	chr4:118673108-118685341	1	-	118673108	118673108	8553170	7	261,95,55,95,95,60,37,	0,390,4181,4935,7380,11299,12196,
#Deleted in new
chr4	118684407	118685303	chr4:118684407-118685303	0	-	118684407	118684407	8553170	2	60,465,	0,431,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	118685367	118715433	chr4:118685367-118715433	3	+	118685534	118710302	0	11	233,89,88,81,88,91,142,93,117,211,5436,	0,2555,4002,6164,6613,9068,11814,15182,18567,20243,24630,
#Partially deleted in new
chr4	118685399	118694463	chr4:118685399-118694463	0	+	118685534	118691536	789624	6	201,89,35,81,88,28,	0,2523,3970,6132,6581,9036,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	118685412	118715433	chr4:118685412-118715433	0	+	118685534	118691557	789624	11	188,89,99,71,88,91,142,93,117,211,5436,	0,2510,3957,6129,6568,9023,11769,15137,18522,20198,24585,
#Partially deleted in new
chr4	118685414	118689429	chr4:118685414-118689429	0	+	118685534	118689429	789624	4	186,150,89,60,	0,1135,2508,3955,
#Partially deleted in new
chr4	118691533	118697355	chr4:118691533-118697355	0	+	118691533	118691533	8553170	4	79,88,91,174,	0,447,2902,5648,
#Partially deleted in new
chr4	118697210	118710601	chr4:118697210-118710601	0	+	118697210	118710087	789624	4	113,93,117,604,	0,3339,6724,12787,
#Partially deleted in new
chr4	118722822	118836138	chr4:118722822-118836138	3	-	118723514	118833696	0	23	833,90,192,180,119,139,146,97,171,117,94,192,125,116,139,128,112,128,276,149,130,159,198,	0,5738,8493,9910,15438,16326,17840,18118,21165,22121,29173,29874,34898,41979,45350,74860,83020,92205,92628,94441,101797,110756,113118,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr4	118722829	118766563	chr4:118722829-118766563	0	-	118722829	118722829	8553170	18	826,90,192,180,843,119,139,146,97,171,117,94,192,125,216,217,116,35,	0,5731,8486,9903,12897,15431,16319,17833,18111,21158,22114,29166,29867,34891,35582,37561,41972,43699,
#Partially deleted in new
chr4	118723023	118769840	chr4:118723023-118769840	1	-	118723514	118768245	789624	16	632,90,192,180,119,139,146,97,171,117,94,192,125,116,139,77,	0,5537,8292,9709,15237,16125,17639,17917,20964,21920,28972,29673,34697,41778,45149,46740,
#Partially deleted in new
chr4	118723520	118728847	chr4:118723520-118728847	0	-	118723520	118723520	8553170	2	135,287,	0,5040,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	118729121	118733315	chr4:118729121-118733315	0	-	118729121	118729121	8553170	2	2386,583,	0,3611,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr4	118736028	118838670	chr4:118736028-118838670	0	-	118825532	118833696	789624	23	541,119,139,146,97,171,117,94,192,125,216,217,116,139,128,112,128,276,149,130,178,159,117,	0,2232,3120,4634,4912,7959,8915,15967,16668,21692,22383,24362,28773,32144,61654,69814,78999,79422,81235,88591,89412,97550,102525,
#Partially deleted in new
chr4	118736551	118836171	chr4:118736551-118836171	1	-	118736551	118757809	789624	20	18,119,139,146,97,171,117,94,192,125,116,139,128,112,128,276,149,130,159,231,	0,1709,2597,4111,4389,7436,8392,15444,16145,21169,28250,31621,61131,69291,78476,78899,80712,88068,97027,99389,
#Deleted in new
chr4	118738103	118739223	chr4:118738103-118739223	0	-	118738103	118738103	8553170	2	276,75,	0,1045,
#Partially deleted in new
chr4	118744073	118754120	chr4:118744073-118754120	0	-	118744073	118744073	8553170	5	85,117,94,192,88,	0,870,7922,8623,9959,
#Partially deleted in new
chr4	118752745	118838672	chr4:118752745-118838672	0	-	118815043	118833696	789624	12	143,125,116,295,139,128,112,128,276,130,159,119,	0,4975,12056,13783,15427,44937,53097,62282,62705,71874,80833,85808,
#Deleted in new
chr4	118764412	118768247	chr4:118764412-118768247	0	-	118764412	118764412	8553170	2	505,75,	0,3760,
#Partially deleted in new
chr4	118797682	118838683	chr4:118797682-118838683	0	-	118805944	118833696	789624	9	128,112,128,276,107,149,130,159,130,	0,8160,17345,17768,19061,19581,26937,35896,40871,
#Partially deleted in new
chr4	118815626	118836614	chr4:118815626-118836614	0	-	118815626	118833696	789624	5	100,149,130,159,64,	0,1637,8993,17952,20924,
#Partially deleted in new
chr4	118833276	118838653	chr4:118833276-118838653	0	-	118833276	118833276	8553170	2	461,100,	0,5277,
#Partially deleted in new
chr4	118850687	119057934	chr4:118850687-119057934	1	+	118850928	119057934	789624	5	253,152,812,2183,534,	0,172742,175939,179157,206713,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	118888840	119061247	chr4:118888840-119061247	3	+	118889036	119057934	789624	5	301,152,812,2183,3847,	0,134589,137786,141004,168560,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	118888840	119061245	chr4:118888840-119061245	1	+	118889036	119057515	789624	3	301,152,3845,	0,134589,168560,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	118888854	119038513	chr4:118888854-119038513	1	+	118889036	119032057	789624	4	287,152,812,8669,	0,134575,137772,140990,
#Partially deleted in new
chr4	118889036	119037447	chr4:118889036-119037447	1	+	118889036	119037189	789624	5	105,152,812,2183,336,	0,134393,137590,140808,148075,
#Deleted in new
chr4	119006031	119006401	chr4:119006031-119006401	7	+	119006031	119006031	16724991	1	370,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	119023470	119061247	chr4:119023470-119061247	0	+	119023470	119057934	789624	4	111,812,2009,3847,	0,3156,6374,33930,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	119042023	119043937	chr4:119042023-119043937	3	+	119042023	119042023	8553170	1	1914,	0,
#Partially deleted in new
chr4	119135783	119187789	chr4:119135783-119187789	3	+	119136525	119186200	789624	6	199,90,170,130,184,1824,	0,728,15088,22238,28427,50182,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	119192772	119212512	chr4:119192772-119212512	7	-	119192772	119192772	16724991	4	1619,176,131,171,	0,2620,2938,19569,
#Partially deleted in new
chr4	119193687	119212644	chr4:119193687-119212644	5	-	119193687	119193687	16724991	3	704,176,118,	0,1705,18839,
#Deleted in new
chr4	119195268	119195691	chr4:119195268-119195691	5	-	119195268	119195268	16724991	1	423,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	119212586	119221495	chr4:119212586-119221495	0	+	119212586	119212586	8553170	2	287,3946,	0,4963,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr4	119212635	119294746	chr4:119212635-119294746	3	+	119239759	119293211	789624	19	238,153,124,122,686,93,135,114,83,106,147,150,163,153,147,739,77,97,2409,	0,1434,4914,22654,26582,32701,36112,43610,43805,47184,47871,49079,54684,55632,57055,58660,60996,78529,79702,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	119212740	119239341	chr4:119212740-119239341	0	+	119212740	119212740	8553170	4	133,124,122,124,	0,4809,22549,26477,
#Partially deleted in new
chr4	119212742	119220211	chr4:119212742-119220211	0	+	119212742	119212742	8553170	4	131,153,124,96,	0,1327,4807,7373,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	119213178	119239312	chr4:119213178-119239312	0	+	119213178	119213178	8553170	5	40,153,124,122,95,	0,891,4371,22111,26039,
#Partially deleted in new
chr4	119239215	119295517	chr4:119239215-119295517	1	+	119239759	119293211	789624	15	688,93,135,114,83,106,147,150,163,153,147,739,77,97,3180,	0,6121,9532,17030,17225,20604,21291,22499,28104,29052,30475,32080,34416,51949,53122,
#Partially deleted in new
chr4	119239639	119294638	chr4:119239639-119294638	0	+	119239759	119266311	789624	16	264,93,135,114,83,106,147,150,34,163,153,147,739,77,97,2301,	0,5697,9108,16606,16801,20180,20867,22075,26660,27680,28628,30051,31656,33992,51525,52698,
#Partially deleted in new
chr4	119261792	119271353	chr4:119261792-119271353	0	+	119261792	119268274	789624	5	72,116,153,147,58,	0,5527,6475,7898,9503,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	119267380	119273330	chr4:119267380-119273330	0	+	119267380	119267380	8553170	4	102,153,147,2035,	0,887,2310,3915,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	119296418	119304445	chr4:119296418-119304445	3	-	119298778	119304445	789624	3	2361,398,201,	0,3917,7826,
#Partially deleted in new
chr4	119298698	119300921	chr4:119298698-119300921	1	-	119298778	119300535	789624	2	81,586,	0,1637,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	119317249	119322390	chr4:119317249-119322390	3	-	119319040	119322102	789624	4	1842,108,173,355,	0,2286,3420,4786,
#Partially deleted in new
chr4	119334328	119378233	chr4:119334328-119378233	7	+	119334328	119334328	16724991	4	125,107,122,167,	0,9829,19781,43738,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	119367561	119367646	chr4:119367561-119367646	3	+	119367561	119367561	8553170	1	85,	0,
#Deleted in new
chr4	119391830	119395335	chr4:119391830-119395335	7	-	119391830	119391830	16724991	1	3505,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr4	119407966	119454638	chr4:119407966-119454638	7	-	119407966	119407966	16724991	18	2172,58,191,119,167,197,97,124,65,236,495,60,66,154,216,132,110,393,	0,2265,4385,5322,10973,11992,12527,14484,23870,26773,32593,34191,36401,36907,37345,40861,42074,46279,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	119409332	119410233	chr4:119409332-119410233	3	+	119409332	119409332	8553170	1	901,	0,
#Deleted in new
chr4	119434004	119434108	chr4:119434004-119434108	3	-	119434004	119434004	8553170	1	104,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	119440560	119450157	chr4:119440560-119450157	5	-	119440560	119440560	16724991	4	75,102,63,116,	0,390,3808,9481,
#Partially deleted in new
chr4	119449569	119454628	chr4:119449569-119454628	4	-	119449569	119449569	16724991	2	556,383,	0,4676,
#Partially deleted in new
chr4	119454790	119460244	chr4:119454790-119460244	7	+	119454790	119454790	16724991	3	343,200,62,	0,3180,5392,
#Partially deleted in new
chr4	119454819	119497903	chr4:119454819-119497903	4	+	119454819	119454819	16724991	8	314,60,97,135,84,105,91,93,	0,5363,5911,6897,8076,38513,39613,42991,
#Partially deleted in new
chr4	119454838	119458238	chr4:119454838-119458238	4	+	119454838	119454838	16724991	2	295,268,	0,3132,
#Partially deleted in new
chr4	119454838	119493437	chr4:119454838-119493437	4	+	119454838	119454838	16724991	7	295,60,97,135,84,73,105,	0,5344,5892,6878,8057,33806,38494,
#Partially deleted in new
chr4	119454895	119461783	chr4:119454895-119461783	4	+	119454895	119454895	16724991	5	238,107,60,97,67,	0,3075,5287,5835,6821,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	119456349	119457277	chr4:119456349-119457277	3	+	119456349	119456349	8553170	2	88,485,	0,443,
#Partially deleted in new
chr4	119457967	119461864	chr4:119457967-119461864	5	+	119457967	119457967	16724991	3	110,78,148,	0,2775,3749,
#Deleted in new
chr4	119460436	119461910	chr4:119460436-119461910	4	+	119460436	119460436	16724991	2	391,194,	0,1280,
#Partially deleted in new
chr4	119488642	119552024	chr4:119488642-119552024	4	+	119488642	119488642	16724991	10	75,105,91,93,114,158,50,93,65,137,	0,4690,5790,9168,23708,24170,40097,55110,61736,63245,
#Partially deleted in new
chr4	119494394	119628991	chr4:119494394-119628991	1	-	119498600	119628671	0	21	4344,84,75,64,78,101,88,95,126,147,60,176,88,109,68,138,90,72,90,589,472,	0,6775,8186,10141,11460,13209,16652,24650,26540,31154,44565,48064,58155,59243,65901,68438,70926,72678,102128,112314,134125,
#Partially deleted in new
chr4	119494396	119628084	chr4:119494396-119628084	1	-	119498600	119607293	789624	21	4342,84,75,64,78,101,88,95,126,147,60,176,88,109,68,138,90,72,90,589,90,	0,6773,8184,10139,11458,13207,16650,24648,26538,31152,44563,48062,58153,59241,65899,68436,70924,72676,102126,112312,133598,
#Partially deleted in new
chr4	119494425	119519566	chr4:119494425-119519566	4	+	119494425	119494425	16724991	5	98,93,114,158,78,	0,3385,17925,18387,25063,
#Deleted in new
chr4	119494464	119498027	chr4:119494464-119498027	4	+	119494464	119494464	16724991	2	59,366,	0,3197,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	119494485	119500279	chr4:119494485-119500279	4	+	119494485	119494485	16724991	3	38,93,719,	0,3325,5075,
#Partially deleted in new
chr4	119498540	119627633	chr4:119498540-119627633	3	-	119498600	119627175	0	21	198,84,75,64,78,101,88,95,126,147,60,176,88,109,68,138,90,72,90,589,484,	0,2629,4040,5995,7314,9063,12506,20504,22394,27008,40419,43918,54009,55097,61755,64292,66780,68532,97982,108168,128609,
#Partially deleted in new
chr4	119500822	119519099	chr4:119500822-119519099	0	-	119501157	119519099	789624	7	431,75,64,78,101,88,55,	0,1758,3713,5032,6781,10224,18222,
#Partially deleted in new
chr4	119502389	119505935	chr4:119502389-119505935	0	-	119502389	119502389	8553170	3	266,64,81,	0,2146,3465,
#Partially deleted in new
chr4	119507652	119519642	chr4:119507652-119519642	0	-	119507652	119507652	8553170	3	52,88,598,	0,3394,11392,
#Partially deleted in new
chr4	119512372	119552025	chr4:119512372-119552025	5	+	119512372	119512372	16724991	5	92,108,50,65,138,	0,440,16367,38006,39515,
#Partially deleted in new
chr4	119517059	119539098	chr4:119517059-119539098	0	-	119517059	119517059	8553170	5	65,95,126,147,139,	0,1985,3875,8489,21900,
#Partially deleted in new
chr4	119519078	119527276	chr4:119519078-119527276	0	-	119519078	119519078	8553170	4	61,126,147,233,	0,1856,6470,7965,
#Partially deleted in new
chr4	119520999	119543297	chr4:119520999-119543297	0	-	119520999	119520999	8553170	5	61,147,60,176,204,	0,4549,17960,21459,22094,
#Deleted in new
chr4	119538780	119542002	chr4:119538780-119542002	0	-	119538780	119538780	8553170	3	62,60,249,	0,179,2973,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	119548205	119552025	chr4:119548205-119552025	5	+	119548205	119548205	16724991	2	2238,138,	0,3682,
#Partially deleted in new
chr4	119552440	119562972	chr4:119552440-119562972	0	-	119552440	119552440	8553170	4	197,109,68,140,	0,1197,7855,10392,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	119569698	119569825	chr4:119569698-119569825	3	+	119569698	119569698	8553170	1	127,	0,
#Partially deleted in new
chr4	119596525	119628065	chr4:119596525-119628065	0	-	119596525	119607293	789624	3	87,589,71,	0,10183,31469,
#Partially deleted in new
chr4	119799095	119804500	chr4:119799095-119804500	3	-	119799095	119799095	8553170	5	141,152,126,169,49,	0,1033,1541,3628,5356,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	119937556	119963898	chr4:119937556-119963898	7	+	119937556	119937556	16724991	7	170,151,42,83,78,184,111,	0,6417,9236,10203,21587,24828,26231,
#Partially deleted in new
chr4	119939539	119964293	chr4:119939539-119964293	3	+	119939539	119939539	789624	2	136,506,	0,24248,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	119947130	119947232	chr4:119947130-119947232	3	+	119947130	119947130	8553170	1	102,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	120055607	120067074	chr4:120055607-120067074	3	-	120060117	120066734	0	5	4683,104,121,147,413,	0,5266,6367,10064,11054,
#Partially deleted in new
chr4	120059436	120066833	chr4:120059436-120066833	0	-	120060924	120066734	0	4	854,104,147,172,	0,1437,6235,7225,
#Partially deleted in new
chr4	120059827	120066858	chr4:120059827-120066858	0	-	120060924	120066734	789624	3	463,104,197,	0,1046,6834,
#Partially deleted in new
chr4	120059827	120061036	chr4:120059827-120061036	0	-	120059827	120059827	8553170	2	463,163,	0,1046,
#Deleted in new
chr4	120065450	120066821	chr4:120065450-120066821	0	-	120065450	120065450	8553170	2	368,160,	0,1211,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	120066957	120085579	chr4:120066957-120085579	3	+	120066957	120066957	8553170	2	44,2295,	0,16327,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	120066957	120165892	chr4:120066957-120165892	1	+	120066957	120066957	8553170	4	44,47,79,403,	0,16327,83585,98532,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	120067510	120416766	chr4:120067510-120416766	1	+	120067510	120067510	8553170	6	91,47,54,94,55,217,	0,15774,261022,268127,325989,349039,
#Deleted in new
chr4	120091045	120092282	chr4:120091045-120092282	7	-	120091045	120091045	16724991	1	1237,	0,
#Deleted in new
chr4	120342055	120342647	chr4:120342055-120342647	7	+	120342055	120342055	16724991	1	592,	0,
#Partially deleted in new
chr4	120639089	120650788	chr4:120639089-120650788	3	+	120639089	120639089	8553170	2	262,282,	0,11417,
#Partially deleted in new
chr4	120639108	120650796	chr4:120639108-120650796	0	+	120639108	120639108	8553170	2	243,287,	0,11401,
#Partially deleted in new
chr4	120684918	120710411	chr4:120684918-120710411	0	-	120684918	120684918	8553170	2	107,103,	0,25390,
#Partially deleted in new
chr4	120691914	120922849	chr4:120691914-120922849	3	-	120695110	120922608	789624	16	3361,105,86,94,161,94,158,85,80,122,93,175,175,123,84,334,	0,18394,62638,85273,89228,93083,106352,107746,119455,124538,124917,126438,129256,161503,215559,230601,
#Partially deleted in new
chr4	120694822	120922858	chr4:120694822-120922858	1	-	120695110	120922608	789624	15	453,105,86,94,161,94,158,85,80,122,175,175,123,84,343,	0,15486,59730,82365,86320,90175,103444,104838,116547,121630,123530,126348,158595,212651,227693,
#Partially deleted in new
chr4	120694822	120922865	chr4:120694822-120922865	1	-	120710351	120922608	789624	14	453,105,94,161,94,158,85,80,122,175,175,123,84,350,	0,15486,82365,86320,90175,103444,104838,116547,121630,123530,126348,158595,212651,227693,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr4	120695110	120922681	chr4:120695110-120922681	0	-	120695110	120695110	8553170	16	165,105,173,86,94,161,94,158,85,80,472,175,175,123,84,166,	0,15198,36507,59442,82077,86032,89887,103156,104550,116259,121342,123242,126060,158307,212363,227405,
#Partially deleted in new
chr4	120695157	120762766	chr4:120695157-120762766	0	-	120695157	120695157	8553170	4	118,105,86,387,	0,15151,59395,67222,
#Partially deleted in new
chr4	120785023	120813006	chr4:120785023-120813006	0	-	120785023	120785023	8553170	5	68,158,85,80,456,	0,13243,14637,26346,27527,
#Partially deleted in new
chr4	120785030	120821176	chr4:120785030-120821176	0	-	120812773	120821176	789624	9	61,158,85,80,264,122,93,175,6,	0,13236,14630,26339,27520,31422,31801,33322,36140,
#Deleted in new
chr4	120810468	120810569	chr4:120810468-120810569	3	+	120810468	120810468	8553170	1	101,	0,
#Partially deleted in new
chr4	120816062	120922695	chr4:120816062-120922695	0	-	120816062	120816062	8553170	6	512,175,175,123,84,180,	0,2290,5108,37355,91411,106453,
#Partially deleted in new
chr4	120818170	120821348	chr4:120818170-120821348	0	-	120818170	120818170	8553170	2	357,178,	0,3000,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	120837344	120922870	chr4:120837344-120922870	1	-	120839238	120922608	789624	4	1930,123,84,355,	0,16073,70129,85171,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	120885504	120922726	chr4:120885504-120922726	0	-	120885504	120885504	8553170	3	281,84,211,	0,21969,37011,
#Partially deleted in new
chr4	120895493	120897083	chr4:120895493-120897083	7	-	120895493	120895493	16724991	3	184,529,92,	0,636,1498,
#Partially deleted in new
chr4	121035612	121072518	chr4:121035612-121072518	3	-	121036263	121045837	789624	4	2045,125,189,526,	0,4317,10037,36380,
#Partially deleted in new
chr4	121037535	121073021	chr4:121037535-121073021	0	-	121037535	121045837	789624	4	122,125,189,128,	0,2394,8114,35358,
#Partially deleted in new
chr4	121037620	121072001	chr4:121037620-121072001	0	-	121037620	121045837	789624	4	37,125,189,209,	0,2309,8029,34172,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	121061171	121061478	chr4:121061171-121061478	3	-	121061171	121061171	8553170	1	307,	0,
#Partially deleted in new
chr4	121071428	121080476	chr4:121071428-121080476	3	+	121071428	121071428	8553170	3	152,115,354,	0,2321,8694,
#Deleted in new
chr4	121118298	121118734	chr4:121118298-121118734	7	+	121118298	121118298	16724991	1	436,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	121131407	121164340	chr4:121131407-121164340	3	-	121132630	121164125	789624	11	1255,61,99,51,126,117,129,150,66,81,281,	0,7216,10408,11318,15641,18695,23143,25686,27279,29728,32652,
#Partially deleted in new
chr4	121132039	121216627	chr4:121132039-121216627	1	-	121132647	121216482	789624	13	623,99,51,126,117,129,150,66,81,87,121,86,42,	0,9776,10686,15009,18063,22511,25054,26647,29096,32020,50636,84375,84546,
#Partially deleted in new
chr4	121132282	121227466	chr4:121132282-121227466	1	-	121132647	121227387	789624	13	380,99,51,126,117,129,150,66,81,87,121,86,82,	0,9533,10443,14766,17820,22268,24811,26404,28853,31777,50393,84132,95102,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	121132391	121150115	chr4:121132391-121150115	0	-	121132391	121132391	8553170	7	271,101,61,99,51,126,13,	0,4193,6232,9424,10334,14657,17711,
#Partially deleted in new
chr4	121132536	121157283	chr4:121132536-121157283	0	-	121132536	121132536	8553170	7	126,99,51,126,117,129,190,	0,9279,10189,14512,17566,22014,24557,
#Partially deleted in new
chr4	121137448	121141899	chr4:121137448-121141899	0	-	121137899	121141899	789624	3	567,61,84,	0,1175,4367,
#Partially deleted in new
chr4	121154237	121164321	chr4:121154237-121164321	0	-	121154237	121154237	8553170	5	442,150,66,81,262,	0,2856,4449,6898,9822,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	121329068	121329170	chr4:121329068-121329170	3	-	121329068	121329068	8553170	1	102,	0,
#Partially deleted in new
chr4	121329311	121380647	chr4:121329311-121380647	0	-	121334607	121380647	789624	7	403,98,236,131,62,159,340,	0,1114,3509,5177,7495,11140,50996,
#Partially deleted in new
chr4	121329313	121380679	chr4:121329313-121380679	1	-	121330430	121380647	789624	6	401,98,123,62,159,372,	0,1112,3620,7493,11138,50994,
#Partially deleted in new
chr4	121329313	121381059	chr4:121329313-121381059	3	-	121329313	121380647	789624	6	401,98,236,62,159,752,	0,1112,3507,7493,11138,50994,
#Partially deleted in new
chr4	121340132	121381059	chr4:121340132-121381059	0	-	121340132	121340132	8553170	2	478,752,	0,40175,
#Deleted in new
chr4	121369432	121370345	chr4:121369432-121370345	7	-	121369432	121369432	16724991	1	913,	0,
#Partially deleted in new
chr4	121451540	121451967	chr4:121451540-121451967	7	+	121451540	121451540	16724991	1	427,	0,
#Partially deleted in new
chr4	121667954	121697113	chr4:121667954-121697113	3	-	121668467	121696589	0	13	573,123,59,96,94,57,80,91,114,95,85,44,251,	0,1647,1999,3592,4578,9939,10460,13716,15409,16722,18333,28626,28908,
#Partially deleted in new
chr4	121668026	121696966	chr4:121668026-121696966	1	-	121668467	121696589	789624	11	501,123,59,96,94,57,80,91,114,44,104,	0,1575,1927,3520,4506,9867,10388,13644,15337,28554,28836,
#Partially deleted in new
chr4	121668026	121696966	chr4:121668026-121696966	0	-	121678396	121696589	789624	13	501,123,59,96,94,57,143,91,114,95,85,44,104,	0,1575,1927,3520,4506,9867,10325,13644,15337,16650,18261,28554,28836,
#Partially deleted in new
chr4	121668075	121696962	chr4:121668075-121696962	1	-	121668467	121696589	789624	10	452,123,59,96,94,57,80,85,44,100,	0,1526,1878,3471,4457,9818,10339,18212,28505,28787,
#Partially deleted in new
chr4	121668245	121678322	chr4:121668245-121678322	0	-	121668245	121668245	8553170	6	282,123,59,96,94,429,	0,1356,1708,3301,4287,9648,
#Partially deleted in new
chr4	121669311	121672558	chr4:121669311-121672558	0	-	121669311	121669311	8553170	4	413,59,96,26,	0,642,2235,3221,
#Partially deleted in new
chr4	121671617	121696975	chr4:121671617-121696975	0	-	121671617	121671617	8553170	9	25,94,57,80,91,114,95,85,395,	0,915,6276,6797,10053,11746,13059,14670,24963,
#Partially deleted in new
chr4	121678453	121696992	chr4:121678453-121696992	0	-	121678453	121678453	8553170	6	41,91,114,95,85,130,	0,3217,4910,6223,7834,18409,
#Partially deleted in new
chr4	121681361	121696992	chr4:121681361-121696992	0	-	121681361	121681361	8553170	6	400,114,95,85,44,130,	0,2002,3315,4926,15219,15501,
#Partially deleted in new
chr4	121681555	121696995	chr4:121681555-121696995	0	-	121681555	121681555	8553170	5	206,114,85,44,133,	0,1808,4732,15025,15307,
#Partially deleted in new
chr4	121681670	121696975	chr4:121681670-121696975	0	-	121683463	121696589	789624	5	91,114,85,44,113,	0,1693,4617,14910,15192,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	121758929	121765185	chr4:121758929-121765185	3	-	121760293	121761883	789624	6	1545,158,63,72,109,369,	0,2608,2900,3797,4834,5887,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	121758932	121764294	chr4:121758932-121764294	0	-	121758932	121758932	8553170	6	1542,158,63,72,109,88,	0,2605,2897,3794,4831,5274,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	121758932	121765127	chr4:121758932-121765127	0	-	121758932	121758932	8553170	5	1542,355,72,109,311,	0,2605,3794,4831,5884,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	121758932	121765185	chr4:121758932-121765185	1	-	121764913	121765105	789624	6	1542,158,63,72,109,369,	0,2605,2897,3794,4831,5884,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	121759363	121765427	chr4:121759363-121765427	0	-	121759363	121759363	8553170	6	1111,158,63,72,109,240,	0,2174,2466,3363,4400,5824,
#Deleted in new
chr4	121760248	121765427	chr4:121760248-121765427	0	-	121760248	121760248	8553170	5	226,355,72,109,240,	0,1289,2478,3515,4939,
#Deleted in new
chr4	121761537	121765361	chr4:121761537-121765361	0	-	121761537	121761537	8553170	5	158,63,69,109,174,	0,292,1189,2226,3650,
#Deleted in new
chr4	121761555	121764760	chr4:121761555-121764760	0	-	121761555	121761555	8553170	4	337,72,109,55,	0,1171,2208,3150,
#Deleted in new
chr4	121762621	121764307	chr4:121762621-121764307	0	-	121762621	121762621	8553170	3	177,109,177,	0,1142,1509,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	121764584	121766814	chr4:121764584-121766814	3	+	121764584	121764584	5263520	1	2230,	0,
#Partially deleted in new
chr4	121801316	121816909	chr4:121801316-121816909	3	+	121801424	121816856	0	12	174,95,120,103,138,83,133,89,147,182,79,138,	0,510,1357,1598,3305,6223,8650,10266,11917,12549,15052,15455,
#Partially deleted in new
chr4	121801317	121815403	chr4:121801317-121815403	0	+	121801317	121801317	8553170	11	173,95,120,103,138,83,133,89,147,182,54,	0,509,1356,1597,3304,6222,8649,10265,11916,12548,14032,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	121801322	121817021	chr4:121801322-121817021	0	+	121801424	121811599	789624	11	168,95,120,103,138,83,107,89,147,2582,250,	0,504,1351,1592,3299,6217,8644,10260,11911,12543,15449,
#Partially deleted in new
chr4	121801324	121811641	chr4:121801324-121811641	0	+	121801424	121804662	789624	7	166,95,59,138,83,133,59,	0,502,1349,3297,6215,8642,10258,
#Partially deleted in new
chr4	121801345	121811660	chr4:121801345-121811660	0	+	121801424	121811660	789624	7	145,95,120,103,83,133,78,	0,481,1328,1569,6194,8621,10237,
#Partially deleted in new
chr4	121801592	121816911	chr4:121801592-121816911	1	+	121801808	121816856	789624	11	329,120,103,138,83,133,89,147,182,79,140,	0,1081,1322,3029,5947,8374,9990,11641,12273,14776,15179,
#Partially deleted in new
chr4	121802737	121813293	chr4:121802737-121813293	0	+	121802737	121802737	8553170	7	56,103,138,83,83,89,60,	0,177,1884,4802,7096,8845,10496,
#Partially deleted in new
chr4	121804498	121807868	chr4:121804498-121807868	0	+	121804498	121804498	8553170	2	261,329,	0,3041,
#Partially deleted in new
chr4	121804731	121814047	chr4:121804731-121814047	0	+	121804731	121814047	789624	5	28,83,133,89,182,	0,2808,5235,6851,9134,
#Partially deleted in new
chr4	121804733	121814627	chr4:121804733-121814627	0	+	121804733	121804733	8553170	5	26,83,133,89,873,	0,2806,5233,6849,9021,
#Partially deleted in new
chr4	121809985	121816840	chr4:121809985-121816840	0	+	121809985	121809985	8553170	5	114,89,293,79,69,	0,1597,3769,6383,6786,
#Partially deleted in new
chr4	121816443	121823932	chr4:121816443-121823932	1	-	121817637	121823628	0	8	1243,134,114,208,224,113,244,517,	0,1600,2356,2928,4098,4535,5959,6972,
#Partially deleted in new
chr4	121816444	121823933	chr4:121816444-121823933	3	-	121817637	121823628	0	8	1242,134,114,208,224,113,244,518,	0,1599,2355,2927,4097,4534,5958,6971,
#Partially deleted in new
chr4	121824439	121870497	chr4:121824439-121870497	3	-	121825859	121870313	789624	19	1554,124,104,110,165,140,66,75,193,103,85,131,117,73,187,176,63,66,220,	0,3706,3962,4179,8791,10704,15191,19487,21064,22964,24404,28516,30264,31049,34552,37064,38777,43541,45838,
#Partially deleted in new
chr4	121824923	121828673	chr4:121824923-121828673	0	-	121825859	121828673	789624	5	305,146,124,104,55,	0,924,3222,3478,3695,
#Partially deleted in new
chr4	121827726	121870450	chr4:121827726-121870450	1	-	121828140	121870313	789624	18	543,104,110,165,140,66,75,193,103,85,131,117,73,187,176,63,66,173,	0,675,892,5504,7417,11904,16200,17777,19677,21117,25229,26977,27762,31265,33777,35490,40254,42551,
#Partially deleted in new
chr4	121855429	121859023	chr4:121855429-121859023	0	-	121855429	121855429	8553170	2	132,32,	0,3562,
#Partially deleted in new
chr4	121858602	121861679	chr4:121858602-121861679	0	-	121858602	121858602	8553170	2	576,176,	0,2901,
#Partially deleted in new
chr4	121861293	121870487	chr4:121861293-121870487	0	-	121861293	121861293	8553170	4	386,63,66,210,	0,1923,6687,8984,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	121870582	121872848	chr4:121870582-121872848	3	+	121870582	121870582	8553170	1	2266,	0,
#Partially deleted in new
chr4	121879026	121933457	chr4:121879026-121933457	3	-	121879735	121933038	789624	11	852,76,84,210,196,265,234,217,165,189,1187,	0,3327,20585,23825,25295,28276,31127,32850,35753,45991,53244,
#Partially deleted in new
chr4	121879027	121951754	chr4:121879027-121951754	1	-	121879735	121951680	789624	12	851,76,84,210,196,265,234,217,165,189,772,289,	0,3326,20584,23824,25294,28275,31126,32849,35752,45990,53243,72438,
#Partially deleted in new
chr4	121879715	121933113	chr4:121879715-121933113	0	-	121925201	121933038	789624	12	163,76,84,210,196,265,234,217,165,189,58,843,	0,2638,19896,23136,24606,27587,30438,32161,35064,45302,51055,52555,
#Partially deleted in new
chr4	121879735	121933038	chr4:121879735-121933038	1	-	121879735	121933038	789624	10	143,76,84,210,196,265,234,217,189,768,	0,2618,19876,23116,24586,27567,30418,32141,45282,52535,
#Partially deleted in new
chr4	121932759	121950874	chr4:121932759-121950874	0	-	121932759	121933038	789624	2	283,336,	0,17779,
#Deleted in new
chr4	122077839	122078318	chr4:122077839-122078318	7	-	122077839	122077839	16724991	1	479,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	122087507	122087811	chr4:122087507-122087811	3	-	122087507	122087507	8553170	1	304,	0,
#Partially deleted in new
chr4	122152332	122362752	chr4:122152332-122362752	3	+	122170647	122362247	789624	86	252,88,130,117,79,65,187,82,194,80,151,157,79,92,118,156,98,179,107,209,228,138,180,129,120,281,251,259,838,71,174,121,147,128,200,198,212,152,151,153,241,143,220,159,176,176,707,246,94,51,207,239,245,106,98,186,169,212,199,60,227,131,124,110,91,254,216,181,202,162,140,202,201,180,138,258,151,158,193,218,252,204,195,135,166,722,	0,1692,18282,20703,22241,23517,33703,35098,35562,37667,39896,44302,44863,47026,48676,54777,55208,56826,57485,58554,67007,68000,72165,74374,76788,77598,82440,85759,87183,90665,91521,92687,93819,94350,94825,97152,98029,101862,102472,102798,104922,106368,110431,111109,111919,114450,118685,119827,122010,123639,127442,129203,134208,136754,148967,152465,153544,155616,156933,161295,163129,164399,165814,172094,172897,175771,178993,181296,182011,183859,184548,186874,191077,192049,194290,195189,196234,196825,197117,197524,200571,201481,203463,204288,207224,209698,
#Partially deleted in new
chr4	122170602	122362758	chr4:122170602-122362758	1	+	122170647	122362247	789624	84	142,117,79,65,187,82,194,80,151,157,79,92,118,156,98,179,107,209,228,138,180,129,120,281,251,259,838,71,174,121,147,128,200,198,212,152,151,153,241,143,220,159,176,176,707,246,94,51,207,239,245,106,98,186,169,212,199,60,227,131,124,110,91,254,216,181,202,162,140,202,201,180,138,258,151,158,193,218,252,204,195,135,166,728,	0,2433,3971,5247,15433,16828,17292,19397,21626,26032,26593,28756,30406,36507,36938,38556,39215,40284,48737,49730,53895,56104,58518,59328,64170,67489,68913,72395,73251,74417,75549,76080,76555,78882,79759,83592,84202,84528,86652,88098,92161,92839,93649,96180,100415,101557,103740,105369,109172,110933,115938,118484,130697,134195,135274,137346,138663,143025,144859,146129,147544,153824,154627,157501,160723,163026,163741,165589,166278,168604,172807,173779,176020,176919,177964,178555,178847,179254,182301,183211,185193,186018,188954,191428,
#Partially deleted in new
chr4	122186180	122239929	chr4:122186180-122239929	0	+	122186180	122239929	789624	23	42,82,194,80,151,157,79,92,118,156,98,179,107,209,228,138,177,129,120,281,251,259,414,	0,1250,1714,3819,6048,10454,11015,13178,14828,20929,21360,22978,23637,24706,33159,34152,38320,40526,42940,43750,48592,51911,53335,
#Partially deleted in new
chr4	122196748	122239929	chr4:122196748-122239929	0	+	122196748	122196748	8553170	18	43,79,92,118,156,98,46,107,209,228,138,177,129,120,281,251,259,414,	0,447,2610,4260,10361,10792,12410,13069,14138,22591,23584,27752,29958,32372,33182,38024,41343,42767,
#Partially deleted in new
chr4	122209173	122227747	chr4:122209173-122227747	0	+	122209173	122209173	8553170	6	164,107,209,228,138,3250,	0,644,1713,10166,11159,15324,
#Partially deleted in new
chr4	122219468	122229195	chr4:122219468-122229195	0	+	122219468	122229195	789624	4	99,138,180,75,	0,864,5029,9652,
#Partially deleted in new
chr4	122239964	122276189	chr4:122239964-122276189	0	+	122239964	122276056	789624	22	389,71,174,121,147,128,200,198,212,152,151,153,241,143,220,159,176,176,707,246,94,218,	0,3033,3889,5055,6187,6718,7193,9520,10397,14230,14840,15166,17290,18736,22799,23477,24287,26818,31053,32195,34378,36007,
#Deleted in new
chr4	122246219	122247688	chr4:122246219-122247688	0	+	122246219	122246219	8553170	3	79,128,531,	0,463,938,
#Partially deleted in new
chr4	122254858	122325784	chr4:122254858-122325784	0	+	122254858	122325732	789624	28	97,153,241,143,220,159,176,176,707,246,94,51,207,239,245,106,98,186,169,212,199,60,227,131,124,110,91,100,	0,272,2396,3842,7905,8583,9393,11924,16159,17301,19484,21113,24916,26677,31682,34228,46441,49939,51018,53090,54407,58769,60603,61873,63288,69568,70371,70826,
#Partially deleted in new
chr4	122309265	122316794	chr4:122309265-122316794	0	+	122309265	122316794	789624	5	199,60,101,201,63,	0,4362,6322,7082,7466,
#Partially deleted in new
chr4	122309364	122362750	chr4:122309364-122362750	0	+	122309364	122362247	789624	30	100,60,227,201,131,124,110,91,63,254,216,181,97,162,140,202,201,180,138,258,151,158,193,218,252,204,195,135,166,720,	0,4263,6097,6983,7367,8782,15062,15865,16490,18739,21961,24264,24979,26827,27516,29842,34045,35017,37258,38157,39202,39793,40085,40492,43539,44449,46431,47256,50192,52666,
#Partially deleted in new
chr4	122324463	122362752	chr4:122324463-122362752	0	+	122324463	122362247	789624	24	73,91,63,254,216,181,97,162,140,202,201,180,138,258,151,158,193,218,252,204,195,135,166,722,	0,766,1391,3640,6862,9165,9880,11728,12417,14743,18946,19918,22159,23058,24103,24694,24986,25393,28440,29350,31332,32157,35093,37567,
#Partially deleted in new
chr4	122327871	122333809	chr4:122327871-122333809	0	+	122327871	122327871	8553170	3	486,216,181,	0,3454,5757,
#Deleted in new
chr4	122336092	122337147	chr4:122336092-122337147	0	+	122336092	122336092	8553170	2	261,267,	0,788,
#Partially deleted in new
chr4	122339220	122344611	chr4:122339220-122344611	0	+	122339220	122344584	789624	3	188,201,230,	0,4189,5161,
#Deleted in new
chr4	122348912	122349978	chr4:122348912-122349978	0	+	122348912	122348912	8553170	3	403,193,122,	0,537,944,
#Partially deleted in new
chr4	122378965	122383906	chr4:122378965-122383906	0	+	122380069	122383906	789624	4	150,180,189,108,	0,1096,2026,4833,
#Partially deleted in new
chr4	122379012	122429784	chr4:122379012-122429784	3	+	122380069	122429739	789624	13	103,74,180,189,168,69,126,124,171,230,238,130,159,	0,359,1049,1979,4786,14576,17239,28895,32209,33567,36366,42248,50613,
#Deleted in new
chr4	122379027	122380182	chr4:122379027-122380182	0	+	122379027	122379027	8553170	2	418,121,	0,1034,
#Partially deleted in new
chr4	122379439	122396377	chr4:122379439-122396377	0	+	122380069	122396377	789624	6	245,180,189,168,69,126,	0,622,1552,4359,14149,16812,
#Partially deleted in new
chr4	122379442	122429802	chr4:122379442-122429802	1	+	122380069	122429739	789624	12	143,180,189,168,69,126,124,138,230,238,130,177,	0,619,1549,4356,14146,16809,28465,31812,33137,35936,41818,50183,
#Partially deleted in new
chr4	122379515	122429784	chr4:122379515-122429784	1	+	122380123	122429739	789624	12	169,145,189,168,69,126,124,171,230,238,130,159,	0,581,1476,4283,14073,16736,28392,31706,33064,35863,41745,50110,
#Partially deleted in new
chr4	122380318	122407949	chr4:122380318-122407949	0	+	122380318	122380318	8553170	6	178,189,168,69,126,42,	0,673,3480,13270,15933,27589,
#Deleted in new
chr4	122451469	122456725	chr4:122451469-122456725	3	-	122451751	122456440	0	4	393,144,60,432,	0,2240,4674,4824,
#Deleted in new
chr4	122451717	122456440	chr4:122451717-122456440	0	-	122451717	122451717	8553170	3	145,144,297,	0,1992,4426,
#Partially deleted in new
chr4	122610107	122621069	chr4:122610107-122621069	3	-	122612709	122621011	789624	5	2653,78,156,36,226,	0,2743,5574,10593,10736,
#Partially deleted in new
chr4	122610107	122621066	chr4:122610107-122621066	1	-	122612709	122621011	789624	5	2653,78,156,36,223,	0,2743,5574,10593,10736,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	122612282	122618894	chr4:122612282-122618894	0	-	122612282	122612282	8553170	4	478,78,156,56,	0,568,3399,6556,
#Partially deleted in new
chr4	122612709	122621011	chr4:122612709-122621011	1	-	122612826	122621011	789624	4	219,156,36,168,	0,2972,7991,8134,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	122618982	122689156	chr4:122618982-122689156	3	+	122618982	122618982	789624	11	510,198,204,127,48,1598,112,128,115,88,620,	0,985,1885,2212,5687,6233,9902,29118,29745,30641,69554,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	122728531	122732482	chr4:122728531-122732482	5	-	122728531	122728531	16724991	2	2104,64,	0,3887,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	122729163	122732461	chr4:122729163-122732461	4	-	122729163	122729163	16724991	3	1472,864,43,	0,1656,3255,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	122729580	122732474	chr4:122729580-122732474	4	-	122729580	122729580	16724991	3	1055,142,188,	0,2471,2706,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	122729580	122732474	chr4:122729580-122732474	6	-	122729580	122729580	16724991	3	1055,142,56,	0,2471,2838,
#Deleted in new
chr4	122730145	122732461	chr4:122730145-122732461	4	-	122730145	122730145	16724991	2	2048,175,	0,2141,
#Deleted in new
chr4	122730547	122732193	chr4:122730547-122732193	5	-	122730547	122730547	16724991	4	96,121,110,142,	0,287,1026,1504,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	122732701	122744943	chr4:122732701-122744943	3	+	122741892	122744025	789624	2	183,3061,	0,9181,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	122732701	122744942	chr4:122732701-122744942	1	+	122741892	122744025	789624	3	183,188,3060,	0,1202,9181,
#Partially deleted in new
chr4	122732796	122742465	chr4:122732796-122742465	0	+	122741892	122742465	789624	3	88,188,583,	0,1107,9086,
#Deleted in new
chr4	122815770	122816117	chr4:122815770-122816117	7	-	122815770	122815770	16724991	1	347,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	122826707	122898236	chr4:122826707-122898236	1	+	122826775	122892396	789624	3	645,104,6026,	0,49613,65503,
#Partially deleted in new
chr4	122826775	122892396	chr4:122826775-122892396	1	+	122826775	122892396	0	3	577,104,186,	0,49545,65435,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	122826830	122895464	chr4:122826830-122895464	1	+	122827174	122892396	0	3	522,104,3254,	0,49490,65380,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	122826830	122898236	chr4:122826830-122898236	3	+	122827174	122892396	0	3	522,104,6026,	0,49490,65380,
#Deleted in new
chr4	122840342	122840690	chr4:122840342-122840690	7	+	122840342	122840342	16724991	1	348,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	122881877	122884712	chr4:122881877-122884712	3	-	122881877	122881877	8553170	2	1365,344,	0,2491,
#Partially deleted in new
chr4	122888696	122892688	chr4:122888696-122892688	0	-	122888696	122888696	8553170	3	260,115,57,	0,1274,3935,
#Partially deleted in new
chr4	122892574	122922582	chr4:122892574-122922582	0	-	122922257	122922572	789624	5	651,55,56,204,654,	0,5049,19993,24926,29354,
#Partially deleted in new
chr4	122892643	122922606	chr4:122892643-122922606	3	-	122892827	122922572	0	5	582,55,56,204,272,	0,4980,19924,24857,29691,
#Partially deleted in new
chr4	122892643	122922968	chr4:122892643-122922968	1	-	122892827	122897669	0	5	582,55,56,204,168,	0,4980,19924,24857,30157,
#Partially deleted in new
chr4	122892645	122922574	chr4:122892645-122922574	0	-	122922257	122922572	789624	4	580,56,204,551,	0,19922,24855,29378,
#Partially deleted in new
chr4	122892649	122922442	chr4:122892649-122922442	0	-	122897634	122922442	789624	3	576,55,108,	0,4974,29685,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	122897525	122922597	chr4:122897525-122922597	0	-	122897525	122897525	8553170	3	153,56,5097,	0,15042,19975,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr4	122923073	123319450	chr4:122923073-123319450	3	+	122923142	123314064	789624	16	232,125,158,59,642,130,57,124,256,155,210,54,80,127,165,5563,	0,4560,5966,10365,11023,12640,13026,15052,24159,56158,105112,133313,134135,167505,332942,390814,
#Partially deleted in new
chr4	122923100	123102293	chr4:122923100-123102293	0	+	122923100	122923100	8553170	15	205,125,158,59,642,130,57,124,256,155,210,54,80,127,110,	0,4533,5939,10338,10996,12613,12999,15025,24132,56131,105085,133286,134108,167478,179083,
#Deleted in new
chr4	123259948	123260118	chr4:123259948-123260118	7	-	123259948	123259948	16724991	1	170,	0,
#Partially deleted in new
chr4	123396794	123401793	chr4:123396794-123401793	0	+	123401591	123401793	789624	3	138,246,257,	0,816,4742,
#Partially deleted in new
chr4	123396794	123403760	chr4:123396794-123403760	3	+	123401591	123402551	789624	3	138,246,2224,	0,816,4742,
#Partially deleted in new
chr4	123396800	123403752	chr4:123396800-123403752	1	+	123401591	123402551	789624	2	132,2216,	0,4736,
#Deleted in new
chr4	123396810	123398337	chr4:123396810-123398337	0	+	123396810	123396810	8553170	2	122,727,	0,800,
#Partially deleted in new
chr4	123398184	123402219	chr4:123398184-123402219	0	+	123401591	123402219	789624	2	329,683,	0,3352,
#Partially deleted in new
chr4	123398385	123403760	chr4:123398385-123403760	1	+	123401591	123402551	789624	2	128,2224,	0,3151,
#Deleted in new
chr4	123399509	123403755	chr4:123399509-123403755	1	+	123401591	123402551	789624	2	285,2219,	0,2027,
#Deleted in new
chr4	123399967	123401696	chr4:123399967-123401696	0	+	123401591	123401696	789624	2	413,160,	0,1569,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	123490267	123522106	chr4:123490267-123522106	3	+	123490267	123490267	8553170	3	245,204,90,	0,6473,31749,
#Partially deleted in new
chr4	123505278	123527525	chr4:123505278-123527525	3	+	123505278	123505278	8553170	3	103,139,342,	0,21084,21905,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	123650266	123666832	chr4:123650266-123666832	1	+	123650266	123650266	8553170	3	66,116,5080,	0,2520,11486,
#Partially deleted in new
chr4	123650290	123930406	chr4:123650290-123930406	3	+	123650290	123650290	8553170	6	42,116,81,93,154,159,	0,2496,11462,178804,274893,279957,
#Partially deleted in new
chr4	123650290	123930354	chr4:123650290-123930354	0	+	123650290	123650290	789624	6	39,116,81,93,154,107,	0,2496,11462,178804,274893,279957,
#Deleted in new
chr4	123744922	123745673	chr4:123744922-123745673	3	-	123744922	123744922	8553170	3	277,71,129,	0,396,622,
#Deleted in new
chr4	123745749	123746226	chr4:123745749-123746226	7	-	123745749	123745749	16724991	1	477,	0,
#Partially deleted in new
chr4	123774263	123865573	chr4:123774263-123865573	1	+	123774263	123774263	789624	3	112,93,1999,	0,54831,89311,
#Deleted in new
chr4	123861859	123862015	chr4:123861859-123862015	7	-	123861859	123861859	16724991	1	156,	0,
#Partially deleted in new
chr4	124062461	124062990	chr4:124062461-124062990	7	+	124062461	124062461	16724991	1	529,	0,
#Deleted in new
chr4	124435749	124437120	chr4:124435749-124437120	7	-	124435749	124435749	16724991	1	1371,	0,
#Deleted in new
chr4	124462862	124463790	chr4:124462862-124463790	7	-	124462862	124462862	16724991	1	928,	0,
#Partially deleted in new
chr4	124664051	124712732	chr4:124664051-124712732	3	-	124668986	124710511	789624	5	3463,3551,230,1275,275,	0,4932,14624,45948,48406,
#Partially deleted in new
chr4	124667358	124712732	chr4:124667358-124712732	1	-	124668986	124678880	789624	4	156,3551,230,275,	0,1625,11317,45099,
#Partially deleted in new
chr4	125316398	125492932	chr4:125316398-125492932	3	+	125316411	125491768	789624	17	5188,132,262,351,923,175,181,245,4350,105,308,86,180,125,218,262,3032,	0,82385,90481,92045,98485,100049,117846,129900,132062,147164,152113,159772,160756,163342,165122,170946,173502,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	125362818	125362929	chr4:125362818-125362929	3	+	125362818	125362818	8553170	1	111,	0,
#Partially deleted in new
chr4	125393935	125491768	chr4:125393935-125491768	1	+	125393935	125491768	789624	15	69,132,262,351,923,175,181,245,4350,308,86,239,218,262,1868,	0,4848,12944,14508,20948,22512,40309,52363,54525,74576,82235,83219,87585,93409,95965,
#Deleted in new
chr4	125446110	125448578	chr4:125446110-125448578	0	+	125446110	125446110	8553170	2	433,118,	0,2350,
#Partially deleted in new
chr4	125507258	125507307	chr4:125507258-125507307	3	+	125507258	125507258	5263520	1	49,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	125676717	125752793	chr4:125676717-125752793	3	+	125676717	125676717	8553170	2	198,195,	0,75881,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	125681176	125683668	chr4:125681176-125683668	7	-	125681176	125681176	16724991	2	1305,433,	0,2059,
#Deleted in new
chr4	125723266	125724217	chr4:125723266-125724217	7	-	125723266	125723266	16724991	1	951,	0,
#Deleted in new
chr4	126070707	126072004	chr4:126070707-126072004	3	+	126070707	126070707	8553170	2	106,194,	0,1103,
#Partially deleted in new
chr4	126106138	126106923	chr4:126106138-126106923	7	-	126106138	126106138	16724991	2	190,209,	0,576,
#Deleted in new
chr4	126563508	126564776	chr4:126563508-126564776	7	+	126563508	126563508	16724991	2	447,655,	0,613,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	127028106	127028219	chr4:127028106-127028219	3	-	127028106	127028106	8553170	1	113,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	127043429	127077762	chr4:127043429-127077762	3	-	127043429	127043429	8553170	3	505,115,28,	0,30346,34305,
#Partially deleted in new
chr4	127096890	127106771	chr4:127096890-127106771	1	-	127096890	127096890	8553170	2	369,137,	0,9744,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	127401725	127470569	chr4:127401725-127470569	0	-	127401725	127401725	8553170	3	35,71,135,	0,55876,68709,
#Partially deleted in new
chr4	127493504	127493828	chr4:127493504-127493828	7	+	127493504	127493504	16724991	1	324,	0,
#Deleted in new
chr4	127498326	127498807	chr4:127498326-127498807	7	+	127498326	127498326	16724991	1	481,	0,
#Partially deleted in new
chr4	127623270	127644036	chr4:127623270-127644036	0	+	127623402	127644036	789624	2	221,516,	0,20250,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr4	127632931	127726737	chr4:127632931-127726737	3	+	127633034	127716436	789624	16	249,536,86,204,119,90,78,190,54,63,222,483,98,190,158,10413,	0,10589,23704,30449,36104,41192,51477,54746,67078,71296,72659,73555,75639,77981,81004,83393,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr4	127632956	127716775	chr4:127632956-127716775	0	+	127633034	127675950	789624	18	224,536,86,204,119,90,161,97,78,2426,54,63,222,483,98,190,158,451,	0,10564,23679,30424,36079,41167,42948,50847,51452,52485,67053,71271,72634,73530,75614,77956,80979,83368,
#Partially deleted in new
chr4	127632965	127716479	chr4:127632965-127716479	0	+	127633034	127685490	789624	17	215,536,86,204,119,90,78,128,127,54,63,222,483,98,190,158,155,	0,10555,23670,30415,36070,41158,51443,52476,54775,67044,71262,72625,73521,75605,77947,80970,83359,
#Partially deleted in new
chr4	127674153	127685950	chr4:127674153-127685950	0	+	127674153	127674153	8553170	3	60,78,509,	0,10255,11288,
#Partially deleted in new
chr4	127687813	127705772	chr4:127687813-127705772	0	+	127687813	127705772	789624	3	54,54,182,	0,12196,17777,
#Partially deleted in new
chr4	127699256	127706543	chr4:127699256-127706543	0	+	127699256	127699256	8553170	5	118,54,63,222,57,	0,753,4971,6334,7230,
#Partially deleted in new
chr4	127706803	127716385	chr4:127706803-127716385	0	+	127706803	127713951	789624	4	166,98,158,61,	0,1767,7132,9521,
#Partially deleted in new
chr4	127730377	127774299	chr4:127730377-127774299	3	+	127730545	127773574	789624	6	400,128,118,155,126,914,	0,14294,33865,36688,38374,43008,
#Partially deleted in new
chr4	127781820	127833042	chr4:127781820-127833042	1	+	127782550	127832874	789624	20	241,198,58,141,123,100,134,245,77,152,107,134,200,96,138,126,108,120,162,360,	0,639,12256,13947,16766,19317,19964,21808,22190,23252,23866,26175,29616,36504,38607,40948,41696,45484,48817,50862,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr4	127782139	127840733	chr4:127782139-127840733	3	+	127782550	127832874	789624	19	518,58,141,123,100,134,245,77,152,107,134,200,96,138,126,108,120,162,8051,	0,11937,13628,16447,18998,19645,21489,21871,22933,23547,25856,29297,36185,38288,40629,41377,45165,48498,50543,
#Partially deleted in new
chr4	127782321	127820469	chr4:127782321-127820469	0	+	127782550	127820469	789624	13	336,58,141,100,134,245,77,152,107,134,200,96,42,	0,11755,13446,18816,19463,21307,21689,22751,23365,25674,29115,36003,38106,
#Partially deleted in new
chr4	127783548	127832968	chr4:127783548-127832968	1	+	127783651	127832874	789624	19	132,58,141,123,100,134,245,77,152,107,134,200,96,138,126,108,120,162,286,	0,10528,12219,15038,17589,18236,20080,20462,21524,22138,24447,27888,34776,36879,39220,39968,43756,47089,49134,
#Deleted in new
chr4	127809169	127809477	chr4:127809169-127809477	7	+	127809169	127809169	16724991	1	308,	0,
#Deleted in new
chr4	127812719	127813200	chr4:127812719-127813200	7	-	127812719	127812719	16724991	1	481,	0,
#Partially deleted in new
chr4	127813017	127820521	chr4:127813017-127820521	0	+	127813017	127813017	8553170	3	458,96,94,	0,5307,7410,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	127840197	127844040	chr4:127840197-127844040	3	-	127840197	127840197	8553170	1	3843,	0,
#Partially deleted in new
chr4	127880860	127899195	chr4:127880860-127899195	3	+	127881134	127898541	0	16	304,96,96,115,1021,101,371,105,103,150,134,92,148,141,107,757,	0,970,2401,2578,4847,6535,9005,10231,10718,11504,12424,12652,12873,14092,15940,17578,
#Partially deleted in new
chr4	127880892	127883516	chr4:127880892-127883516	0	+	127880892	127880892	8553170	4	272,96,92,78,	0,938,2373,2546,
#Partially deleted in new
chr4	127880898	127883470	chr4:127880898-127883470	0	+	127880898	127880898	8553170	3	266,96,209,	0,932,2363,
#Partially deleted in new
chr4	127880908	127899067	chr4:127880908-127899067	1	+	127881134	127898541	789624	16	256,96,96,115,1021,101,137,105,103,150,134,92,148,141,107,629,	0,922,2353,2530,4799,6487,9191,10183,10670,11456,12376,12604,12825,14044,15892,17530,
#Partially deleted in new
chr4	127880926	127898639	chr4:127880926-127898639	1	+	127881134	127898541	0	15	238,96,115,1021,101,371,105,103,150,134,92,148,141,107,201,	0,904,2512,4781,6469,8939,10165,10652,11438,12358,12586,12807,14026,15874,17512,
#Partially deleted in new
chr4	127880928	127898800	chr4:127880928-127898800	1	+	127881134	127898541	789624	16	236,96,96,115,919,101,371,24,103,150,134,92,148,141,107,362,	0,902,2333,2510,4779,6467,8937,10163,10650,11436,12356,12584,12805,14024,15872,17510,
#Partially deleted in new
chr4	127881231	127898579	chr4:127881231-127898579	1	+	127881923	127898541	0	16	139,96,96,115,1021,101,371,105,103,150,134,92,148,141,107,141,	0,599,2030,2207,4476,6164,8634,9860,10347,11133,12053,12281,12502,13721,15569,17207,
#Partially deleted in new
chr4	127887333	127891194	chr4:127887333-127891194	0	+	127887333	127887333	8553170	3	163,371,103,	0,2532,3758,
#Partially deleted in new
chr4	127890996	127892693	chr4:127890996-127892693	0	+	127890996	127890996	8553170	3	200,103,329,	0,582,1368,
#Partially deleted in new
chr4	127891170	127898486	chr4:127891170-127898486	0	+	127891170	127898486	789624	7	26,34,92,148,141,107,48,	0,1194,2342,2563,3782,5630,7268,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	127891990	127892082	chr4:127891990-127892082	3	+	127891990	127891990	8553170	1	92,	0,
#Partially deleted in new
chr4	127893199	127898542	chr4:127893199-127898542	0	+	127893199	127893199	8553170	6	219,92,148,141,107,104,	0,313,534,1753,3601,5239,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	127917731	127965669	chr4:127917731-127965669	1	-	127920629	127965133	789624	12	3105,248,104,135,109,56,145,114,241,44,92,598,	0,3792,4128,12951,15253,21051,22121,24313,26020,32072,39769,47340,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	127917798	127965949	chr4:127917798-127965949	3	-	127920629	127965133	789624	13	3038,248,104,135,109,56,145,114,241,44,92,137,53,	0,3725,4061,12884,15186,20984,22054,24246,25953,32005,39702,47273,48098,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	127917803	127920600	chr4:127917803-127920600	0	-	127917803	127917803	8553170	3	584,100,44,	0,1435,2753,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	127917813	127965322	chr4:127917813-127965322	1	-	127920629	127965133	789624	11	3023,248,104,135,109,56,145,241,44,92,251,	0,3710,4046,12869,15171,20969,22039,25938,31990,39687,47258,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	127917819	127965164	chr4:127917819-127965164	0	-	127933080	127965133	789624	10	3017,248,123,135,109,145,241,44,92,93,	0,3704,4040,12863,15165,22033,25932,31984,39681,47252,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	127917824	127965148	chr4:127917824-127965148	0	-	127933080	127965133	789624	11	3012,248,104,135,109,145,114,241,44,92,77,	0,3699,4035,12858,15160,22028,24220,25927,31979,39676,47247,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	127917824	127965190	chr4:127917824-127965190	0	-	127920629	127965133	789624	13	1514,280,248,104,135,109,56,145,114,241,44,92,119,	0,2732,3699,4035,12858,15160,20958,22028,24220,25927,31979,39676,47247,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	127917826	127965173	chr4:127917826-127965173	1	-	127920629	127965133	789624	10	3010,248,104,135,109,114,241,44,92,102,	0,3697,4033,12856,15158,24218,25925,31977,39674,47245,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	127917834	127965963	chr4:127917834-127965963	0	-	127933080	127957519	789624	9	3002,248,135,109,145,241,44,92,67,	0,3689,12848,15150,22018,25917,31969,39666,48062,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	127917845	127965984	chr4:127917845-127965984	0	-	127933080	127957519	789624	10	2991,248,104,135,109,145,241,44,92,88,	0,3678,4014,12837,15139,22007,25906,31958,39655,48051,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	127917848	127965154	chr4:127917848-127965154	0	-	127921758	127965133	789624	9	2988,248,135,109,114,241,44,92,83,	0,3675,12834,15136,24196,25903,31955,39652,47223,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	127917851	127965142	chr4:127917851-127965142	0	-	127921758	127965133	789624	8	2985,248,135,109,241,44,92,71,	0,3672,12831,15133,25900,31952,39649,47220,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	127917859	127965171	chr4:127917859-127965171	0	-	127921758	127965133	789624	11	2977,248,135,109,56,145,114,241,44,92,100,	0,3664,12823,15125,20923,21993,24185,25892,31944,39641,47212,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	127917859	127965361	chr4:127917859-127965361	1	-	127920629	127957519	789624	9	2977,248,104,135,109,241,44,92,119,	0,3664,4000,12823,15125,25892,31944,39641,47383,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	127917859	127965171	chr4:127917859-127965171	1	-	127920629	127965133	789624	9	2977,248,104,135,109,241,44,92,100,	0,3664,4000,12823,15125,25892,31944,39641,47212,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	127917861	127965158	chr4:127917861-127965158	0	-	127921758	127965133	789624	10	2975,248,135,109,56,145,241,44,92,87,	0,3662,12821,15123,20921,21991,25890,31942,39639,47210,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	127917888	127965984	chr4:127917888-127965984	1	-	127920629	127957519	789624	9	2948,248,104,135,109,241,44,92,88,	0,3635,3971,12794,15096,25863,31915,39612,48008,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	127917888	127966034	chr4:127917888-127966034	1	-	127920629	127957519	789624	12	2948,248,104,135,109,56,145,114,241,44,92,138,	0,3635,3971,12794,15096,20894,21964,24156,25863,31915,39612,48008,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	127917888	127965074	chr4:127917888-127965074	0	-	127920629	127965074	789624	12	1450,380,248,104,135,109,56,145,241,44,92,3,	0,2568,3635,3971,12794,15096,20894,21964,25863,31915,39612,47183,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	127917897	127965171	chr4:127917897-127965171	0	-	127920629	127965133	789624	13	1441,380,248,104,135,109,56,145,114,241,44,92,100,	0,2559,3626,3962,12785,15087,20885,21955,24147,25854,31906,39603,47174,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	127917924	127965148	chr4:127917924-127965148	1	-	127921758	127965133	789624	10	3847,135,109,56,145,114,241,44,92,77,	0,12758,15060,20858,21928,24120,25827,31879,39576,47147,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	127917959	127933713	chr4:127917959-127933713	0	-	127917959	127917959	8553170	4	3812,104,135,729,	0,3900,12723,15025,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	127918294	127930709	chr4:127918294-127930709	0	-	127921758	127930709	789624	5	95,100,384,248,27,	0,944,2158,3229,12388,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	127919193	127942047	chr4:127919193-127942047	0	-	127933012	127942047	789624	7	145,380,248,135,109,56,3,	0,1263,2330,11489,13791,19589,22851,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	127919214	127965995	chr4:127919214-127965995	0	-	127921758	127957519	789624	12	1622,248,135,109,56,145,114,241,44,90,411,99,	0,2309,11468,13770,19568,20638,22830,24537,30589,38286,45857,46682,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	127919290	127965164	chr4:127919290-127965164	0	-	127933012	127965133	789624	11	1546,81,248,135,109,56,114,241,44,92,93,	0,1827,2233,11392,13694,19492,22754,24461,30513,38210,45781,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	127919312	127965148	chr4:127919312-127965148	0	-	127933012	127965133	789624	10	26,1215,135,109,56,114,241,44,92,77,	0,1244,11370,13672,19470,22732,24439,30491,38188,45759,
#Partially deleted in new
chr4	127919780	127965164	chr4:127919780-127965164	1	-	127920624	127965133	789624	6	1056,114,241,44,92,93,	0,22264,23971,30023,37720,45291,
#Partially deleted in new
chr4	127920056	127965180	chr4:127920056-127965180	1	-	127921758	127965133	789624	8	1715,135,109,114,241,44,92,109,	0,10626,12928,21988,23695,29747,37444,45015,
#Partially deleted in new
chr4	127920188	127965145	chr4:127920188-127965145	1	-	127921758	127965133	789624	9	1583,135,109,56,145,241,44,92,74,	0,10494,12796,18594,19664,23563,29615,37312,44883,
#Partially deleted in new
chr4	127920218	127965949	chr4:127920218-127965949	0	-	127933012	127957519	789624	9	618,248,135,109,56,241,44,92,53,	0,1305,10464,12766,18564,23533,29585,37282,45678,
#Partially deleted in new
chr4	127920219	127965164	chr4:127920219-127965164	0	-	127933012	127957519	789624	10	617,248,135,109,56,114,241,44,90,93,	0,1304,10463,12765,18563,21825,23532,29584,37281,44852,
#Partially deleted in new
chr4	127920253	127965251	chr4:127920253-127965251	0	-	127933012	127965133	789624	10	583,248,104,135,109,56,241,44,92,180,	0,1270,1606,10429,12731,18529,23498,29550,37247,44818,
#Partially deleted in new
chr4	127920264	127965179	chr4:127920264-127965179	0	-	127933012	127965133	789624	11	572,248,104,135,109,56,114,241,44,92,108,	0,1259,1595,10418,12720,18518,21780,23487,29539,37236,44807,
#Partially deleted in new
chr4	127920301	127965949	chr4:127920301-127965949	0	-	127933012	127957519	789624	11	535,248,104,135,109,56,114,241,44,92,53,	0,1222,1558,10381,12683,18481,21743,23450,29502,37199,45595,
#Partially deleted in new
chr4	127920321	127965230	chr4:127920321-127965230	1	-	127920629	127957519	789624	11	515,248,104,135,109,54,114,241,44,90,159,	0,1202,1538,10361,12663,18461,21723,23430,29482,37179,44750,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	127920339	127939400	chr4:127920339-127939400	0	-	127920339	127920339	8553170	6	497,248,104,135,109,618,	0,1184,1520,10343,12645,18443,
#Partially deleted in new
chr4	127920556	127965191	chr4:127920556-127965191	0	-	127933080	127965133	789624	10	280,440,135,109,145,114,241,44,92,120,	0,967,10126,12428,19296,21488,23195,29247,36944,44515,
#Partially deleted in new
chr4	127920617	127965180	chr4:127920617-127965180	1	-	127921505	127965133	789624	11	1154,104,135,109,56,145,114,241,44,92,109,	0,1242,10065,12367,18165,19235,21427,23134,29186,36883,44454,
#Partially deleted in new
chr4	127920627	127965145	chr4:127920627-127965145	0	-	127933080	127965133	789624	9	1144,135,109,145,114,241,44,92,74,	0,10055,12357,19225,21417,23124,29176,36873,44444,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	127920655	127934662	chr4:127920655-127934662	0	-	127920655	127920655	8553170	5	181,248,135,109,105,	0,868,10027,12329,13902,
#Deleted in new
chr4	127921356	127921989	chr4:127921356-127921989	0	-	127921356	127921356	8553170	2	415,130,	0,503,
#Partially deleted in new
chr4	127921466	127939886	chr4:127921466-127939886	0	-	127921758	127939886	789624	5	305,135,109,56,34,	0,9216,11518,17316,18386,
#Partially deleted in new
chr4	127921925	127949847	chr4:127921925-127949847	0	-	127921925	127949847	789624	7	38,109,56,145,114,241,44,	0,11059,16857,17927,20119,21826,27878,
#Partially deleted in new
chr4	127930672	127933237	chr4:127930672-127933237	0	-	127930672	127930672	8553170	2	145,253,	0,2312,
#Partially deleted in new
chr4	127930682	127965153	chr4:127930682-127965153	0	-	127930682	127942093	789624	6	135,109,56,145,114,82,	0,2302,8100,9170,11362,34389,
#Partially deleted in new
chr4	127930687	127957590	chr4:127930687-127957590	0	-	127930687	127930687	8553170	2	130,90,	0,26813,
#Partially deleted in new
chr4	127932318	127965171	chr4:127932318-127965171	1	-	127933012	127965133	789624	7	775,56,114,241,44,92,100,	0,6464,9726,11433,17485,25182,32753,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	127932339	127964936	chr4:127932339-127964936	0	-	127932339	127932339	8553170	8	754,56,145,114,241,44,92,278,	0,6443,7513,9705,11412,17464,25161,32319,
#Partially deleted in new
chr4	127932369	127965952	chr4:127932369-127965952	1	-	127933012	127957519	789624	7	724,56,114,241,44,92,56,	0,6413,9675,11382,17434,25131,33527,
#Partially deleted in new
chr4	127932421	127965164	chr4:127932421-127965164	1	-	127938820	127965133	789624	8	672,54,145,114,241,44,92,93,	0,6361,7431,9623,11330,17382,25079,32650,
#Partially deleted in new
chr4	127932663	127965145	chr4:127932663-127965145	1	-	127932980	127965133	789624	7	430,56,145,241,44,92,74,	0,6119,7189,11088,17140,24837,32408,
#Partially deleted in new
chr4	127932914	127965148	chr4:127932914-127965148	1	-	127932980	127965133	789624	8	179,56,145,114,241,44,92,77,	0,5868,6938,9130,10837,16889,24586,32157,
#Partially deleted in new
chr4	127933017	127965217	chr4:127933017-127965217	0	-	127942149	127965133	789624	7	76,56,145,114,44,92,146,	0,5765,6835,9027,16786,24483,32054,
#Partially deleted in new
chr4	127933064	127965182	chr4:127933064-127965182	0	-	127943987	127965133	789624	7	29,56,145,114,241,92,111,	0,5718,6788,8980,10687,24436,32007,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	127939079	127949846	chr4:127939079-127949846	0	-	127939079	127939079	8553170	4	522,114,241,43,	0,2965,4672,10724,
#Partially deleted in new
chr4	127939778	127965148	chr4:127939778-127965148	0	-	127939778	127939778	8553170	6	219,114,241,44,92,77,	0,2266,3973,10025,17722,25293,
#Partially deleted in new
chr4	127942070	127965143	chr4:127942070-127965143	0	-	127942070	127957519	789624	5	79,241,44,90,72,	0,1681,7733,15430,23001,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	127943390	127965219	chr4:127943390-127965219	0	-	127943390	127943390	8553170	4	602,44,92,148,	0,6413,14110,21681,
#Partially deleted in new
chr4	127943755	127965938	chr4:127943755-127965938	0	-	127943755	127965133	789624	5	237,44,92,151,42,	0,6048,13745,21316,22141,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	127945334	127965957	chr4:127945334-127965957	0	-	127945334	127945334	8553170	4	296,44,92,61,	0,4469,12166,20562,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	127965305	128031290	chr4:127965305-128031290	1	+	127982955	128030676	789624	11	301,109,85,101,79,85,28,139,90,379,781,	0,17633,19033,24415,43614,43801,46367,52057,54774,63169,65204,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	127965305	128039927	chr4:127965305-128039927	3	+	127982955	128035813	789624	13	301,109,85,101,79,85,28,139,90,102,379,163,4166,	0,17633,19033,24415,43614,43801,46367,52057,54774,55831,63169,65204,70456,
#Partially deleted in new
chr4	127965314	128036286	chr4:127965314-128036286	0	+	127982955	128008940	789624	12	292,109,85,79,95,76,144,90,102,379,163,525,	0,17624,19024,43605,43792,44245,52043,54765,55822,63160,65195,70447,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	127965376	128031313	chr4:127965376-128031313	1	+	127982955	128030676	789624	11	230,109,85,101,79,87,26,139,90,379,804,	0,17562,18962,24344,43543,43730,46298,51986,54703,63098,65133,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	127965410	128039711	chr4:127965410-128039711	1	+	128001728	128035813	789624	13	196,109,85,45,79,87,26,139,90,102,379,163,3950,	0,17528,18928,36305,43509,43696,46264,51952,54669,55726,63064,65099,70351,
#Partially deleted in new
chr4	127965473	128008957	chr4:127965473-128008957	0	+	127982955	128008957	789624	6	133,103,109,85,101,38,	0,480,17465,18865,24247,43446,
#Partially deleted in new
chr4	127965505	128030805	chr4:127965505-128030805	1	+	128009130	128030676	789624	11	101,109,85,79,85,28,139,90,102,379,296,	0,17433,18833,43414,43601,46167,51857,54574,55631,62969,65004,
#Partially deleted in new
chr4	128061267	128211988	chr4:128061267-128211988	3	+	128074951	128210053	789624	20	134,59,60,175,141,144,166,145,175,173,363,124,36,212,107,161,145,110,128,2133,	0,13192,13666,16520,20897,29733,30079,36918,45871,53302,60558,100926,115604,117163,118138,138171,139253,145160,145988,148588,
#Partially deleted in new
chr4	128061285	128123869	chr4:128061285-128123869	1	+	128074951	128122514	789624	12	116,59,60,175,141,144,166,145,175,173,363,1388,	0,13174,13648,16502,20879,29715,30061,36900,45853,53284,60540,61196,
#Partially deleted in new
chr4	128061311	128179410	chr4:128061311-128179410	0	+	128074951	128179410	789624	13	90,59,60,175,144,166,145,175,173,363,124,212,5,	0,13148,13622,16476,29689,30035,36874,45827,53258,60514,100882,117119,118094,
#Partially deleted in new
chr4	128061334	128108901	chr4:128061334-128108901	1	+	128074951	128107902	789624	10	67,59,60,175,141,144,166,145,175,1019,	0,13125,13599,16453,20830,29666,30012,36851,45804,46548,
#Partially deleted in new
chr4	128061347	128108901	chr4:128061347-128108901	1	+	128074951	128107402	789624	9	54,59,60,175,141,144,166,145,1763,	0,13112,13586,16440,20817,29653,29999,36838,45791,
#Partially deleted in new
chr4	128061513	128211131	chr4:128061513-128211131	1	+	128061693	128210053	8553170	20	706,59,60,175,141,144,166,145,175,173,363,124,36,212,107,161,145,110,128,1276,	0,12946,13420,16274,20651,29487,29833,36672,45625,53056,60312,100680,115358,116917,117892,137925,139007,144914,145742,148342,
#Partially deleted in new
chr4	128061693	128108854	chr4:128061693-128108854	1	+	128061693	128107902	8553170	10	526,59,60,175,141,144,166,145,175,972,	0,12766,13240,16094,20471,29307,29653,36492,45445,46189,
#Partially deleted in new
chr4	128061693	128108861	chr4:128061693-128108861	1	+	128061693	128107402	8553170	9	526,59,60,175,141,144,166,145,1723,	0,12766,13240,16094,20471,29307,29653,36492,45445,
#Deleted in new
chr4	128069013	128069612	chr4:128069013-128069612	7	-	128069013	128069013	16724991	1	599,	0,
#Partially deleted in new
chr4	128077840	128122352	chr4:128077840-128122352	0	+	128077840	128122233	789624	8	122,141,144,166,145,175,173,527,	0,4324,13160,13506,20345,29298,36729,43985,
#Partially deleted in new
chr4	128122116	128222926	chr4:128122116-128222926	0	+	128122116	128178436	789624	8	72,212,107,161,145,110,128,578,	0,56314,57289,77322,78404,84311,85139,100232,
#Deleted in new
chr4	128155388	128156204	chr4:128155388-128156204	7	+	128155388	128155388	16724991	1	816,	0,
#Partially deleted in new
chr4	128179313	128222931	chr4:128179313-128222931	0	+	128179313	128179313	8553170	7	199,161,145,110,128,86,583,	0,20125,21207,27114,27942,41041,43035,
#Partially deleted in new
chr4	128179313	128222595	chr4:128179313-128222595	0	+	128179313	128179313	8553170	7	199,161,145,128,138,86,247,	0,20125,21207,27942,30542,41041,43035,
#Partially deleted in new
chr4	128179346	128222595	chr4:128179346-128222595	0	+	128179346	128179346	8553170	8	166,161,145,110,128,138,86,247,	0,20092,21174,27081,27909,30509,41008,43002,
#Partially deleted in new
chr4	128269236	128288822	chr4:128269236-128288822	1	-	128271315	128287862	789624	3	2177,156,1450,	0,3125,18136,
#Partially deleted in new
chr4	128269241	128287811	chr4:128269241-128287811	1	-	128271315	128287790	789624	3	2172,156,439,	0,3120,18131,
#Partially deleted in new
chr4	128269241	128288829	chr4:128269241-128288829	3	-	128271315	128287862	789624	3	2172,156,1457,	0,3120,18131,
#Partially deleted in new
chr4	128269255	128273061	chr4:128269255-128273061	1	-	128271315	128272398	789624	2	2158,700,	0,3106,
#Partially deleted in new
chr4	128270611	128288203	chr4:128270611-128288203	1	-	128271315	128272398	789624	3	802,156,186,	0,1750,17406,
#Partially deleted in new
chr4	128270704	128286878	chr4:128270704-128286878	1	-	128271315	128272398	789624	3	709,156,163,	0,1657,16011,
#Partially deleted in new
chr4	128270870	128286787	chr4:128270870-128286787	1	-	128271315	128286690	789624	3	543,156,119,	0,1491,15798,
#Partially deleted in new
chr4	128271358	128287388	chr4:128271358-128287388	0	-	128286754	128287388	789624	4	55,156,121,98,	0,1003,15357,15932,
#Partially deleted in new
chr4	128292750	128466661	chr4:128292750-128466661	3	+	128292750	128292750	8553170	5	372,84,74,53,54,	0,7387,10211,167576,173857,
#Partially deleted in new
chr4	128292932	128474996	chr4:128292932-128474996	0	+	128292932	128292932	8553170	5	190,84,74,167,228,	0,7205,10029,177117,181836,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	128428069	128519394	chr4:128428069-128519394	1	+	128428069	128428069	789624	9	229,165,167,198,78,159,235,142,639,	0,38538,41980,42282,53603,55259,83341,87787,90686,
#Partially deleted in new
chr4	128455168	128470647	chr4:128455168-128470647	0	+	128455168	128455168	8553170	4	114,165,167,296,	0,11439,14881,15183,
#Partially deleted in new
chr4	128470505	128471080	chr4:128470505-128471080	0	+	128470505	128470505	8553170	2	44,248,	0,327,
#Deleted in new
chr4	128552589	128553416	chr4:128552589-128553416	3	-	128552589	128552589	8553170	2	248,55,	0,772,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	128567971	128570531	chr4:128567971-128570531	3	-	128567971	128567971	8553170	2	1316,307,	0,2253,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	128582998	128601400	chr4:128582998-128601400	3	-	128582998	128582998	8553170	2	394,88,	0,18314,
#Deleted in new
chr4	128599438	128601407	chr4:128599438-128601407	0	-	128599438	128599438	8553170	2	108,95,	0,1874,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	128768227	128769948	chr4:128768227-128769948	3	+	128768227	128768227	8553170	1	1721,	0,
#Partially deleted in new
chr4	128809622	128875224	chr4:128809622-128875224	3	+	128831758	128872262	789624	11	255,78,86,158,188,212,168,117,522,118,3870,	0,22110,33330,36752,39357,42434,46007,47715,52081,58233,61732,
#Partially deleted in new
chr4	128809702	128864081	chr4:128809702-128864081	1	+	128831758	128862252	789624	9	175,78,86,158,188,212,168,117,2378,	0,22030,33250,36672,39277,42354,45927,47635,52001,
#Partially deleted in new
chr4	128809814	128875224	chr4:128809814-128875224	1	+	128831758	128872262	789624	11	63,78,86,158,152,212,168,117,522,118,3870,	0,21918,33138,36560,39201,42242,45815,47523,51889,58041,61540,
#Partially deleted in new
chr4	128809843	128849093	chr4:128809843-128849093	0	+	128831758	128849093	789624	6	34,97,78,86,158,114,	0,6523,21889,33109,36531,39136,
#Partially deleted in new
chr4	128809918	128872334	chr4:128809918-128872334	1	+	128831758	128872262	789624	11	373,78,86,158,188,212,168,117,522,118,980,	0,21814,33034,36456,39061,42138,45711,47419,51785,57937,61436,
#Partially deleted in new
chr4	128809919	128849072	chr4:128809919-128849072	0	+	128831758	128849072	789624	5	169,78,86,158,93,	0,21813,33033,36455,39060,
#Partially deleted in new
chr4	128810030	128831811	chr4:128810030-128831811	0	+	128831758	128831811	789624	3	356,97,79,	0,6336,21702,
#Partially deleted in new
chr4	128811269	128875224	chr4:128811269-128875224	1	+	128831758	128872262	789624	11	127,78,86,158,188,212,168,117,522,118,3870,	0,20463,31683,35105,37710,40787,44360,46068,50434,56586,60085,
#Partially deleted in new
chr4	128811287	128849112	chr4:128811287-128849112	0	+	128831758	128849112	789624	5	109,78,86,158,133,	0,20445,31665,35087,37692,
#Partially deleted in new
chr4	128811291	128852128	chr4:128811291-128852128	0	+	128831758	128848991	789624	5	105,78,86,188,72,	0,20441,31661,37688,40765,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	128811325	128864630	chr4:128811325-128864630	1	+	128831758	128862252	789624	9	78,78,86,158,188,212,168,117,2927,	0,20407,31627,35049,37654,40731,44304,46012,50378,
#Partially deleted in new
chr4	128811843	128849078	chr4:128811843-128849078	0	+	128831758	128849078	789624	5	131,78,86,158,99,	0,19889,31109,34531,37136,
#Partially deleted in new
chr4	128811843	128875224	chr4:128811843-128875224	1	+	128831758	128872262	789624	11	131,78,86,158,188,212,168,117,522,118,3870,	0,19889,31109,34531,37136,40213,43786,45494,49860,56012,59511,
#Partially deleted in new
chr4	128831432	128849040	chr4:128831432-128849040	0	+	128831758	128849040	789624	5	121,78,86,158,61,	0,300,11520,14942,17547,
#Partially deleted in new
chr4	128864920	128936704	chr4:128864920-128936704	0	-	128864920	128864920	8553170	8	71,118,138,52,130,96,79,50,	0,7284,8185,9494,11586,23758,26138,71734,
#Partially deleted in new
chr4	128883992	129093607	chr4:128883992-129093607	3	-	128884476	129093103	789624	21	547,96,79,197,193,146,75,72,99,178,92,91,71,66,123,136,56,73,59,68,538,	0,4686,7066,52662,59003,62014,64503,68776,73033,75607,81234,86385,108174,113881,115679,119748,155048,159402,160000,198313,209077,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	128883996	128972372	chr4:128883996-128972372	0	-	128883996	128883996	8553170	11	543,96,79,197,193,146,75,72,99,178,1995,	0,4682,7062,52658,58999,62010,64499,68772,73029,75603,86381,
#Partially deleted in new
chr4	128884345	129093410	chr4:128884345-129093410	1	-	128884476	129093103	789624	8	194,96,79,56,73,59,68,341,	0,4333,6713,154695,159049,159647,197960,208724,
#Partially deleted in new
chr4	128884345	129093412	chr4:128884345-129093412	1	-	128884476	129082338	789624	12	194,96,79,71,66,123,136,56,73,59,68,343,	0,4333,6713,107821,113528,115326,119395,154695,159049,159647,197960,208724,
#Partially deleted in new
chr4	128884389	128997285	chr4:128884389-128997285	0	-	128884389	128884389	8553170	15	150,96,79,197,193,146,75,190,72,99,178,92,91,71,82,	0,4289,6669,52265,58606,61617,64106,67953,68379,72636,75210,80837,85988,107777,112814,
#Deleted in new
chr4	128944627	128944956	chr4:128944627-128944956	7	+	128944627	128944627	16724991	1	329,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	129036594	129093377	chr4:129036594-129093377	1	-	129038020	129093103	789624	6	1532,56,73,59,68,308,	0,2446,6800,7398,45711,56475,
#Partially deleted in new
chr4	129039192	129093545	chr4:129039192-129093545	1	-	129040206	129093103	789624	5	1020,73,59,68,476,	0,4202,4800,43113,53877,
#Partially deleted in new
chr4	129039229	129093563	chr4:129039229-129093563	1	-	129040206	129082338	789624	5	983,73,59,68,421,	0,4165,4763,43076,53913,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	129093316	129116640	chr4:129093316-129116640	3	+	129102610	129111791	789624	6	712,190,61,52,200,4955,	0,9285,13270,15990,16156,18369,
#Partially deleted in new
chr4	129093699	129109966	chr4:129093699-129109966	1	+	129102610	129109676	789624	5	329,190,61,52,494,	0,8902,12887,15607,15773,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	129096126	129112687	chr4:129096126-129112687	1	+	129102610	129111791	789624	6	83,190,61,52,200,1002,	0,6475,10460,13180,13346,15559,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	129096126	129103037	chr4:129096126-129103037	0	+	129096126	129096126	8553170	2	83,436,	0,6475,
#Partially deleted in new
chr4	129096128	129109536	chr4:129096128-129109536	0	+	129102610	129109536	789624	4	81,190,61,64,	0,6473,10458,13344,
#Partially deleted in new
chr4	129096169	129106599	chr4:129096169-129106599	0	+	129102610	129106599	789624	5	96,66,100,190,13,	0,4497,5922,6432,10417,
#Deleted in new
chr4	129133105	129134098	chr4:129133105-129134098	7	+	129133105	129133105	16724991	1	993,	0,
#Partially deleted in new
chr4	129135925	129139740	chr4:129135925-129139740	7	-	129135925	129135925	16724991	3	882,329,1532,	0,1619,2283,
#Deleted in new
chr4	129177385	129179094	chr4:129177385-129179094	7	+	129177385	129177385	16724991	2	204,81,	0,1628,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	129724170	129771478	chr4:129724170-129771478	3	-	129724170	129724170	789624	5	1619,112,72,93,67,	0,2751,20137,25457,47241,
#Partially deleted in new
chr4	129748116	129771481	chr4:129748116-129771481	1	-	129748116	129748116	8553170	6	141,116,101,132,93,70,	0,225,687,1019,1511,23295,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr4	129771658	129955368	chr4:129771658-129955368	3	+	129771658	129771658	789624	17	29,90,124,145,64,99,112,113,115,55,201,117,70,61,66,199,117,	0,8351,31333,35345,40343,41003,42015,53681,62551,65712,90909,128879,136975,177418,181615,182719,183593,
#Partially deleted in new
chr4	129771663	129791660	chr4:129771663-129791660	1	+	129771663	129771663	8553170	4	24,90,313,76,	0,8346,17248,19921,
#Partially deleted in new
chr4	129788958	129798649	chr4:129788958-129798649	1	+	129788958	129788958	8553170	3	266,63,152,	0,2626,9539,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	129837360	129928716	chr4:129837360-129928716	1	+	129837360	129837360	8553170	4	65,201,117,149,	0,25207,63177,91207,
#Deleted in new
chr4	129903009	129904163	chr4:129903009-129904163	7	+	129903009	129903009	16724991	1	1154,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	130376228	130386371	chr4:130376228-130386371	3	+	130376228	130376228	8553170	2	331,299,	0,9844,
#Deleted in new
chr4	130494672	130495285	chr4:130494672-130495285	7	+	130494672	130494672	16724991	1	613,	0,
#Deleted in new
chr4	130503356	130504344	chr4:130503356-130504344	7	-	130503356	130503356	16724991	1	988,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	130808506	130811933	chr4:130808506-130811933	3	+	130808506	130808506	8553170	1	3427,	0,
#Partially deleted in new
chr4	130881026	130885641	chr4:130881026-130885641	3	-	130881026	130881026	8553170	2	321,113,	0,4502,
#Partially deleted in new
chr4	131112747	131113255	chr4:131112747-131113255	7	+	131112747	131112747	16724991	2	128,60,	0,448,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	131485956	131541397	chr4:131485956-131541397	1	+	131485956	131485956	8553170	4	118,89,59,257,	0,36963,41273,55184,
#Deleted in new
chr4	131540280	131540489	chr4:131540280-131540489	7	+	131540280	131540280	16724991	1	209,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	131720259	131720543	chr4:131720259-131720543	3	-	131720259	131720259	8553170	1	284,	0,
#Deleted in new
chr4	131768139	131768249	chr4:131768139-131768249	3	+	131768139	131768139	8553170	1	110,	0,
#Deleted in new
chr4	131768232	131768578	chr4:131768232-131768578	7	+	131768232	131768232	16724991	1	346,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	131773301	131774692	chr4:131773301-131774692	3	+	131773301	131773301	8553170	2	391,100,	0,1291,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	131773546	131775036	chr4:131773546-131775036	1	+	131773546	131773546	8553170	3	146,90,444,	0,733,1046,
#Partially deleted in new
chr4	131773564	131791482	chr4:131773564-131791482	0	+	131773564	131773564	8553170	2	128,273,	0,17645,
#Deleted in new
chr4	131857342	131857913	chr4:131857342-131857913	7	-	131857342	131857342	16724991	1	571,	0,
#Partially deleted in new
chr4	131930030	131975952	chr4:131930030-131975952	3	-	131930030	131930030	8553170	3	281,143,30,	0,3475,45892,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	132004809	132124031	chr4:132004809-132124031	3	-	132004809	132004809	8553170	3	265,136,181,	0,23536,119041,
#Deleted in new
chr4	132367785	132368479	chr4:132367785-132368479	7	-	132367785	132367785	16724991	1	694,	0,
#Partially deleted in new
chr4	132435801	132447235	chr4:132435801-132447235	3	-	132435801	132435801	8553170	3	136,124,204,	0,10570,11230,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	132591088	132678503	chr4:132591088-132678503	3	+	132591088	132591088	789624	4	188,135,104,81,	0,53619,71173,87334,
#Deleted in new
chr4	132592083	132592536	chr4:132592083-132592536	7	+	132592083	132592083	16724991	1	453,	0,
#Partially deleted in new
chr4	132836771	132981677	chr4:132836771-132981677	3	-	132836771	132836771	8553170	3	423,132,32,	0,33614,144874,
#Partially deleted in new
chr4	132985509	132988677	chr4:132985509-132988677	3	-	132985509	132985509	8553170	3	99,113,250,	0,186,2918,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	133093859	133149113	chr4:133093859-133149113	3	-	133093859	133093859	789624	9	2091,148,74,56,74,72,142,78,85,	0,2876,45100,45966,46726,48851,51744,53339,55169,
#Deleted in new
chr4	133124103	133126063	chr4:133124103-133126063	7	+	133124103	133124103	16724991	1	1960,	0,
#Deleted in new
chr4	133140580	133149116	chr4:133140580-133149116	0	-	133140580	133140580	8553170	5	79,177,142,78,88,	0,2025,5023,6618,8448,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	133149314	133194700	chr4:133149314-133194700	3	+	133150140	133190160	789624	5	3457,59,107,306,4560,	0,4992,5602,13662,40826,
#Deleted in new
chr4	133149314	133153888	chr4:133149314-133153888	1	+	133150140	133152831	789624	1	4574,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	133154892	133208606	chr4:133154892-133208606	0	+	133154892	133154892	8553170	3	131,306,531,	0,8084,53183,
#Partially deleted in new
chr4	133574565	133575208	chr4:133574565-133575208	7	-	133574565	133574565	16724991	3	108,98,80,	0,291,563,
#Partially deleted in new
chr4	133871245	134010690	chr4:133871245-134010690	3	-	133871245	133871245	8553170	4	396,79,62,82,	0,106720,107586,139363,
#Partially deleted in new
chr4	134196332	134201748	chr4:134196332-134201748	3	-	134199906	134201019	789624	2	4913,31,	0,5385,
#Partially deleted in new
chr4	134255172	134327470	chr4:134255172-134327470	0	-	134255172	134255172	8553170	3	348,183,213,	0,52368,72085,
#Partially deleted in new
chr4	134305401	134327449	chr4:134305401-134327449	3	-	134305401	134305401	8553170	3	485,183,192,	0,2139,21856,
#Partially deleted in new
chr4	134307563	134327473	chr4:134307563-134327473	1	-	134307563	134307563	8553170	3	156,95,216,	0,18982,19694,
#Partially deleted in new
chr4	134327062	134328798	chr4:134327062-134328798	7	+	134327062	134327062	16724991	1	1736,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	134759398	134817289	chr4:134759398-134817289	3	+	134759398	134759398	8553170	5	109,122,113,67,78,	0,20857,29832,56558,57813,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	134932888	134934131	chr4:134932888-134934131	3	-	134932888	134932888	8553170	2	152,494,	0,749,
#Partially deleted in new
chr4	134944274	134944523	chr4:134944274-134944523	7	+	134944274	134944274	16724991	1	249,	0,
#Partially deleted in new
chr4	134952258	134952889	chr4:134952258-134952889	7	-	134952258	134952258	16724991	1	631,	0,
#Deleted in new
chr4	135045463	135046850	chr4:135045463-135046850	7	+	135045463	135045463	16724991	1	1387,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	135067232	135071378	chr4:135067232-135071378	1	+	135067232	135067232	8553170	2	235,432,	0,3714,
#Partially deleted in new
chr4	135067232	135097658	chr4:135067232-135097658	3	+	135067232	135067232	8553170	4	268,138,94,189,	0,25045,29780,30237,
#Partially deleted in new
chr4	135092393	135097649	chr4:135092393-135097649	1	+	135092393	135092393	8553170	3	22,82,180,	0,4619,5076,
#Partially deleted in new
chr4	135112904	135123737	chr4:135112904-135123737	3	-	135112904	135112904	8553170	3	394,120,256,	0,1795,10577,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	135315417	135315522	chr4:135315417-135315522	3	-	135315417	135315417	8553170	1	105,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	135371176	135371924	chr4:135371176-135371924	7	-	135371176	135371176	16724991	1	748,	0,
#Partially deleted in new
chr4	135565116	135567157	chr4:135565116-135567157	7	-	135565116	135565116	16724991	1	2041,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	135792383	135805904	chr4:135792383-135805904	3	-	135792383	135792383	8553170	3	412,94,58,	0,538,13463,
#Deleted in new
chr4	135866982	135867904	chr4:135866982-135867904	0	-	135866982	135866982	8553170	2	200,59,	0,863,
#Partially deleted in new
chr4	135866989	135913680	chr4:135866989-135913680	0	-	135866989	135866989	789624	3	193,71,59,	0,846,46632,
#Partially deleted in new
chr4	135867002	135888090	chr4:135867002-135888090	3	-	135867002	135867002	789624	4	180,71,96,120,	0,833,18414,20968,
#Deleted in new
chr4	136004508	136004902	chr4:136004508-136004902	7	-	136004508	136004508	16724991	1	394,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	136097796	136099240	chr4:136097796-136099240	3	-	136097796	136097796	8553170	1	1444,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	136118674	136281294	chr4:136118674-136281294	1	-	136118674	136118674	8553170	4	307,289,42,237,	0,1175,142734,162383,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	136173198	136395471	chr4:136173198-136395471	3	-	136173198	136173198	8553170	3	162,42,321,	0,88210,221952,
#Partially deleted in new
chr4	136355109	136356336	chr4:136355109-136356336	7	-	136355109	136355109	16724991	1	1227,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	136553235	136553739	chr4:136553235-136553739	3	+	136553235	136553235	8553170	1	504,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	136796721	137212799	chr4:136796721-137212799	3	-	136796721	136796721	8553170	4	1513,52,40,63,	0,119453,292839,416015,
#Partially deleted in new
chr4	137193755	137198367	chr4:137193755-137198367	3	+	137193755	137193755	789624	2	414,1162,	0,3450,
#Deleted in new
chr4	137301000	137301187	chr4:137301000-137301187	7	-	137301000	137301000	16724991	1	187,	0,
#Deleted in new
chr4	137425425	137425864	chr4:137425425-137425864	7	-	137425425	137425425	16724991	1	439,	0,
#Deleted in new
chr4	137448086	137448501	chr4:137448086-137448501	7	+	137448086	137448086	16724991	1	415,	0,
#Partially deleted in new
chr4	137518917	137532475	chr4:137518917-137532475	3	-	137521028	137532088	789624	4	2779,164,89,2874,	0,9560,9814,10684,
#Partially deleted in new
chr4	137519702	137532459	chr4:137519702-137532459	1	-	137521028	137532088	789624	4	1994,164,86,2858,	0,8775,9029,9899,
#Partially deleted in new
chr4	137519702	137532494	chr4:137519702-137532494	1	-	137521028	137531428	789624	5	1994,164,86,2141,240,	0,8775,9029,9899,12552,
#Partially deleted in new
chr4	137520837	137532494	chr4:137520837-137532494	1	-	137521028	137529721	789624	5	859,164,89,131,240,	0,7640,7894,8764,11417,
#Partially deleted in new
chr4	137520837	137532476	chr4:137520837-137532476	1	-	137521028	137532284	789624	4	859,164,86,222,	0,7640,7894,11417,
#Partially deleted in new
chr4	137521372	137532494	chr4:137521372-137532494	1	-	137521690	137532284	789624	4	329,164,86,240,	0,7105,7359,10882,
#Partially deleted in new
chr4	137521506	137529576	chr4:137521506-137529576	0	-	137521506	137521506	8553170	4	190,164,86,113,	0,6971,7225,7957,
#Deleted in new
chr4	137528566	137529551	chr4:137528566-137529551	0	-	137528566	137528566	8553170	2	75,820,	0,165,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	137545730	137603430	chr4:137545730-137603430	3	+	137545730	137545730	789624	2	80,2184,	0,55516,
#Partially deleted in new
chr4	137601898	137602433	chr4:137601898-137602433	3	-	137601898	137601898	8553170	1	535,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	137690476	137734977	chr4:137690476-137734977	3	-	137690476	137690476	8553170	5	203,49,93,109,58,	0,803,1764,3277,44443,
#Partially deleted in new
chr4	137807705	137816402	chr4:137807705-137816402	3	+	137807705	137807705	8553170	2	65,193,	0,8504,
#Partially deleted in new
chr4	138032353	138091039	chr4:138032353-138091039	0	-	138032353	138032353	8553170	2	163,97,	0,58589,
#Partially deleted in new
chr4	138032451	138049572	chr4:138032451-138049572	0	-	138032451	138032451	8553170	4	65,37,227,169,	0,15489,15928,16952,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	138057463	138098717	chr4:138057463-138098717	1	+	138057463	138057463	8553170	4	45,96,147,529,	0,5344,33370,40725,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	138089013	138178177	chr4:138089013-138178177	3	+	138089013	138089013	789624	7	293,147,1285,102,174,136,2517,	0,1820,15493,79703,82519,85458,86647,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	138105394	138174577	chr4:138105394-138174577	0	+	138105394	138105394	8553170	4	397,85,102,106,	0,54413,63322,69077,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	138164096	138242349	chr4:138164096-138242349	3	-	138171955	138242069	789624	12	7921,178,150,97,104,124,45,100,126,116,127,557,	0,15120,16544,18200,19105,21024,50488,55169,59102,68170,72228,77696,
#Partially deleted in new
chr4	138171629	138174770	chr4:138171629-138174770	0	+	138171629	138171629	8553170	2	77,299,	0,2842,
#Partially deleted in new
chr4	138171843	138223244	chr4:138171843-138223244	0	-	138183268	138223244	789624	7	174,178,150,104,45,100,46,	0,7373,8797,11358,42741,47422,51355,
#Partially deleted in new
chr4	138277114	138281784	chr4:138277114-138281784	3	-	138277114	138277114	8553170	2	359,46,	0,4624,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	138298855	138312658	chr4:138298855-138312658	3	-	138298855	138298855	8553170	2	90,365,	0,13438,
#Partially deleted in new
chr4	138309710	138313720	chr4:138309710-138313720	0	+	138309710	138309710	8553170	2	137,430,	0,3580,
#Partially deleted in new
chr4	138309741	138424149	chr4:138309741-138424149	1	+	138309741	138309741	8553170	4	106,246,133,102,	0,29270,39976,114306,
#Partially deleted in new
chr4	138309741	138349833	chr4:138309741-138349833	1	+	138309741	138309741	8553170	4	106,111,246,116,	0,3549,29270,39976,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	138425522	138436869	chr4:138425522-138436869	3	+	138425522	138425522	8553170	2	82,457,	0,10890,
#Deleted in new
chr4	138481254	138482096	chr4:138481254-138482096	7	-	138481254	138481254	16724991	1	842,	0,
#Deleted in new
chr4	138560703	138561941	chr4:138560703-138561941	7	+	138560703	138560703	16724991	1	1238,	0,
#Deleted in new
chr4	138664724	138665569	chr4:138664724-138665569	3	-	138664724	138664724	8553170	2	414,149,	0,696,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	138773549	138801639	chr4:138773549-138801639	3	+	138773549	138773549	8553170	2	144,722,	0,27368,
#Partially deleted in new
chr4	138773587	138801329	chr4:138773587-138801329	1	+	138773587	138773587	8553170	4	106,156,44,412,	0,21471,26476,27330,
#Deleted in new
chr4	138819953	138821465	chr4:138819953-138821465	0	-	138819953	138819953	8553170	2	124,76,	0,1436,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	138819956	139012646	chr4:138819956-139012646	3	-	138819956	138819956	789624	3	121,109,52,	0,175955,192638,
#Partially deleted in new
chr4	138819959	138937981	chr4:138819959-138937981	1	-	138819959	138819959	8553170	3	118,145,158,	0,25269,117864,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	138923929	138924232	chr4:138923929-138924232	3	-	138923929	138923929	8553170	1	303,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	139015788	139045937	chr4:139015788-139045937	3	+	139015981	139045474	0	3	383,270,1299,	0,27285,28850,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	139015795	139045939	chr4:139015795-139045939	0	+	139015981	139043387	789624	3	376,818,378,	0,27278,29766,
#Partially deleted in new
chr4	139028111	139060595	chr4:139028111-139060595	0	-	139028111	139028111	8553170	2	238,272,	0,32212,
#Partially deleted in new
chr4	139043071	139045105	chr4:139043071-139045105	0	+	139043071	139043071	8553170	2	272,467,	0,1567,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	139055474	139055578	chr4:139055474-139055578	3	+	139055474	139055474	8553170	1	104,	0,
#Partially deleted in new
chr4	139057219	139177218	chr4:139057219-139177218	3	-	139058982	139137701	789624	10	2388,351,193,87,138,114,166,238,85,252,	0,3104,4645,10464,14646,16234,67944,80410,82193,119747,
#Partially deleted in new
chr4	139057716	139084414	chr4:139057716-139084414	1	-	139058982	139084190	789624	6	1891,351,193,174,114,282,	0,2607,4148,14149,15737,26416,
#Partially deleted in new
chr4	139057716	139139476	chr4:139057716-139139476	1	-	139058982	139137701	789624	9	1891,351,193,87,174,114,166,238,64,	0,2607,4148,9967,14149,15737,67447,79913,81696,
#Partially deleted in new
chr4	139057854	139084496	chr4:139057854-139084496	1	-	139058982	139084190	789624	7	1753,351,193,87,174,114,364,	0,2469,4010,9829,14011,15599,26278,
#Partially deleted in new
chr4	139058718	139084325	chr4:139058718-139084325	1	-	139058982	139084190	789624	7	889,351,193,87,138,114,193,	0,1605,3146,8965,13147,14735,25414,
#Partially deleted in new
chr4	139060478	139084337	chr4:139060478-139084337	0	-	139060478	139084190	789624	5	196,193,174,114,205,	0,1386,11387,12975,23654,
#Partially deleted in new
chr4	139060600	139084224	chr4:139060600-139084224	0	-	139060600	139084190	789624	5	74,193,138,114,92,	0,1264,11265,12853,23532,
#Partially deleted in new
chr4	139061866	139073719	chr4:139061866-139073719	0	-	139061866	139061866	8553170	4	191,87,138,266,	0,5817,9999,11587,
#Partially deleted in new
chr4	139061936	139072220	chr4:139061936-139072220	0	-	139061936	139061936	8553170	3	121,87,355,	0,5747,9929,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	139066009	139084338	chr4:139066009-139084338	0	-	139066009	139066009	8553170	4	1761,138,114,206,	0,5856,7444,18123,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	139100376	139100658	chr4:139100376-139100658	3	+	139100376	139100376	8553170	1	282,	0,
#Deleted in new
chr4	139114929	139115374	chr4:139114929-139115374	7	-	139114929	139114929	16724991	1	445,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	139136770	139177218	chr4:139136770-139177218	0	-	139136770	139136770	8553170	3	1097,85,252,	0,2642,40196,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	139155152	139155444	chr4:139155152-139155444	3	+	139155152	139155152	8553170	1	292,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	139185440	139185746	chr4:139185440-139185746	3	+	139185440	139185440	8553170	1	306,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	139231025	139231119	chr4:139231025-139231119	3	-	139231025	139231025	8553170	1	94,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	139256656	139256760	chr4:139256656-139256760	3	-	139256656	139256656	8553170	1	104,	0,
#Partially deleted in new
chr4	139266162	139280338	chr4:139266162-139280338	3	-	139266598	139280158	789624	4	879,94,104,262,	0,2509,9126,13914,
#Partially deleted in new
chr4	139266879	139295815	chr4:139266879-139295815	0	-	139292549	139295798	0	6	162,94,104,80,104,84,	0,1792,8409,25650,28163,28852,
#Partially deleted in new
chr4	139289916	139302551	chr4:139289916-139302551	1	-	139292549	139295798	0	6	176,80,104,229,36,136,	0,2613,5126,5815,6415,12499,
#Partially deleted in new
chr4	139289916	139301210	chr4:139289916-139301210	1	-	139292549	139295798	0	5	176,80,104,229,609,	0,2613,5126,5815,10685,
#Partially deleted in new
chr4	139289916	139302551	chr4:139289916-139302551	3	-	139292549	139295798	0	5	176,80,104,229,136,	0,2613,5126,5815,12499,
#Partially deleted in new
chr4	139289916	139301210	chr4:139289916-139301210	1	-	139292549	139295798	0	6	176,80,104,229,59,609,	0,2613,5126,5815,7468,10685,
#Partially deleted in new
chr4	139289937	139301204	chr4:139289937-139301204	1	-	139292549	139295798	0	5	155,80,104,229,241,	0,2592,5105,5794,11026,
#Partially deleted in new
chr4	139289952	139302526	chr4:139289952-139302526	0	-	139289952	139289952	8553170	5	140,80,104,229,111,	0,2577,5090,5779,12463,
#Partially deleted in new
chr4	139289952	139301420	chr4:139289952-139301420	0	-	139289952	139289952	8553170	5	140,80,104,229,129,	0,2577,5090,5779,11339,
#Partially deleted in new
chr4	139290030	139302479	chr4:139290030-139302479	1	-	139292549	139295798	0	6	62,80,104,229,59,64,	0,2499,5012,5701,7354,12385,
#Partially deleted in new
chr4	139295117	139301233	chr4:139295117-139301233	0	-	139295117	139295117	8553170	4	29,229,36,270,	0,614,1214,5846,
#Partially deleted in new
chr4	139295731	139301210	chr4:139295731-139301210	0	-	139295731	139295731	8553170	2	229,609,	0,4870,
#Partially deleted in new
chr4	139301454	139391382	chr4:139301454-139391382	3	+	139301777	139388084	0	20	377,85,105,158,135,154,120,96,107,73,170,153,129,214,194,109,99,147,98,3499,	0,32719,35393,39457,41371,42731,48007,49736,50050,52571,55931,58288,59045,60269,68756,74910,77301,83377,84678,86429,
#Partially deleted in new
chr4	139301587	139391368	chr4:139301587-139391368	1	+	139301777	139388084	789624	20	244,85,105,158,135,154,120,96,107,73,170,153,129,214,194,109,99,144,98,3485,	0,32586,35260,39324,41238,42598,47874,49603,49917,52438,55798,58155,58912,60136,68623,74777,77168,83247,84545,86296,
#Partially deleted in new
chr4	139301983	139341073	chr4:139301983-139341073	0	+	139301983	139301983	8553170	4	198,85,105,162,	0,32190,34864,38928,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	139318377	139318486	chr4:139318377-139318486	3	+	139318377	139318377	8553170	1	109,	0,
#Partially deleted in new
chr4	139336872	139351613	chr4:139336872-139351613	0	+	139336872	139336872	8553170	7	80,158,135,154,120,96,109,	0,4039,5953,7313,12589,14318,14632,
#Partially deleted in new
chr4	139351534	139359857	chr4:139351534-139359857	0	+	139351534	139351534	8553170	5	77,73,95,170,115,	0,2491,4954,5851,8208,
#Partially deleted in new
chr4	139376376	139379335	chr4:139376376-139379335	0	+	139376376	139376376	8553170	2	97,580,	0,2379,
#Partially deleted in new
chr4	139384835	139386547	chr4:139384835-139386547	0	+	139384835	139384835	8553170	2	143,415,	0,1297,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	139386167	139420033	chr4:139386167-139420033	1	+	139393602	139417949	789624	4	63,132,93,2168,	0,7423,18230,31698,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	139411926	139453955	chr4:139411926-139453955	1	-	139411926	139411926	8553170	3	2098,141,271,	0,40430,41758,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	139413801	139416146	chr4:139413801-139416146	1	-	139413801	139413801	8553170	2	223,210,	0,2135,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	139413815	139453776	chr4:139413815-139453776	1	-	139413815	139413815	8553170	4	209,76,54,92,	0,2121,6054,39869,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	139413823	139454034	chr4:139413823-139454034	3	-	139413823	139413823	8553170	3	201,76,350,	0,2113,39861,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	139426298	139427295	chr4:139426298-139427295	5	-	139426298	139426298	16724991	1	997,	0,
#Partially deleted in new
chr4	139426842	139430884	chr4:139426842-139430884	7	-	139426842	139426842	16724991	2	414,243,	0,3799,
#Deleted in new
chr4	139436367	139436494	chr4:139436367-139436494	3	-	139436367	139436367	8553170	1	127,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	139448442	139453776	chr4:139448442-139453776	1	-	139448442	139448442	8553170	1	5334,	0,
#Deleted in new
chr4	139453231	139454285	chr4:139453231-139454285	0	+	139453231	139453231	8553170	2	466,109,	0,945,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	139453806	139476609	chr4:139453806-139476609	3	+	139454195	139473126	789624	2	638,3924,	0,18879,
#Partially deleted in new
chr4	139495940	139556238	chr4:139495940-139556238	1	-	139496352	139556137	789624	8	581,158,118,82,190,202,130,141,	0,21944,24336,27413,33090,37224,50979,60157,
#Partially deleted in new
chr4	139496088	139520396	chr4:139496088-139520396	0	-	139496088	139496088	8553170	3	433,158,120,	0,21796,24188,
#Partially deleted in new
chr4	139506035	139556774	chr4:139506035-139556774	3	-	139511662	139556137	0	8	5808,158,118,82,190,202,130,677,	0,11849,14241,17318,22995,27129,40884,50062,
#Partially deleted in new
chr4	139532578	139556769	chr4:139532578-139556769	1	-	139533128	139556137	789624	3	788,130,672,	0,14341,23519,
#Partially deleted in new
chr4	139532581	139556208	chr4:139532581-139556208	1	-	139533274	139547037	789624	4	785,130,101,111,	0,14338,15437,23516,
#Deleted in new
chr4	139546265	139546727	chr4:139546265-139546727	7	+	139546265	139546265	16724991	1	462,	0,
#Deleted in new
chr4	139556798	139557643	chr4:139556798-139557643	3	+	139556798	139556798	8553170	1	845,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	139596607	139606699	chr4:139596607-139606699	1	-	139601440	139604416	789624	6	4883,75,82,42,97,102,	0,6075,7793,8161,9752,9990,
#Partially deleted in new
chr4	139618135	139623232	chr4:139618135-139623232	3	-	139618135	139618135	8553170	2	966,132,	0,4965,
#Partially deleted in new
chr4	139665767	139704253	chr4:139665767-139704253	1	+	139666019	139704148	789624	5	310,100,71,82,238,	0,12775,29429,37687,38248,
#Partially deleted in new
chr4	139665767	139740745	chr4:139665767-139740745	3	+	139666019	139704148	789624	6	310,100,71,82,181,534,	0,12775,29429,37687,38248,74444,
#Partially deleted in new
chr4	139665834	139704224	chr4:139665834-139704224	1	+	139666019	139703530	789624	4	243,100,82,209,	0,12708,37620,38181,
#Partially deleted in new
chr4	139665932	139740745	chr4:139665932-139740745	0	+	139665932	139665932	8553170	5	145,71,82,181,534,	0,29264,37522,38083,74279,
#Partially deleted in new
chr4	139665996	139679124	chr4:139665996-139679124	0	+	139665996	139665996	8553170	2	81,582,	0,12546,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	139666015	139731435	chr4:139666015-139731435	0	+	139666019	139704148	789624	7	62,100,71,82,181,123,1161,	0,12527,29181,37439,38000,39589,64259,
#Partially deleted in new
chr4	139666027	139704068	chr4:139666027-139704068	0	+	139666027	139666027	8553170	6	50,100,81,71,82,53,	0,12515,21632,29169,37427,37988,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	139685126	139685427	chr4:139685126-139685427	3	-	139685126	139685126	8553170	1	301,	0,
#Partially deleted in new
chr4	139698143	139698554	chr4:139698143-139698554	7	-	139698143	139698143	16724991	1	411,	0,
#Partially deleted in new
chr4	139716752	140154184	chr4:139716752-140154184	3	-	139719322	140153327	789624	5	3571,85,252,1611,1325,	0,8998,13663,172604,436107,
#Partially deleted in new
chr4	139720211	140152969	chr4:139720211-140152969	0	-	139720211	140152969	789624	4	112,85,252,110,	0,5539,10204,432648,
#Deleted in new
chr4	139794124	139794433	chr4:139794124-139794433	3	-	139794124	139794124	8553170	1	309,	0,
#Deleted in new
chr4	139889182	139890052	chr4:139889182-139890052	1	-	139889182	139890052	789624	5	51,42,27,603,108,	0,53,97,126,762,
#Partially deleted in new
chr4	140128014	140134565	chr4:140128014-140134565	3	+	140128014	140128014	8553170	3	73,67,517,	0,5036,6034,
#Partially deleted in new
chr4	140257285	140382556	chr4:140257285-140382556	3	+	140343638	140381104	0	5	125,88,72,84,1595,	0,86335,121835,122283,123676,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	140283723	140373360	chr4:140283723-140373360	3	-	140283723	140283723	789624	5	1545,140,163,41,98,	0,7666,9537,85586,89539,
#Deleted in new
chr4	140314162	140314550	chr4:140314162-140314550	7	-	140314162	140314162	16724991	1	388,	0,
#Partially deleted in new
chr4	140343442	140382554	chr4:140343442-140382554	1	+	140343638	140381104	0	5	27,88,72,84,1593,	0,178,35678,36126,37519,
#Partially deleted in new
chr4	140343460	140382556	chr4:140343460-140382556	1	+	140343638	140381104	0	4	248,72,84,1595,	0,35660,36108,37501,
#Partially deleted in new
chr4	140343600	140381280	chr4:140343600-140381280	1	+	140379170	140381104	789624	5	108,104,72,84,319,	0,33074,35520,35968,37361,
#Partially deleted in new
chr4	140360681	140373381	chr4:140360681-140373381	0	-	140360681	140360681	8553170	3	293,41,119,	0,8628,12581,
#Partially deleted in new
chr4	140360811	140373354	chr4:140360811-140373354	1	-	140360811	140360811	8553170	4	163,109,41,92,	0,1898,8498,12451,
#Deleted in new
chr4	140366239	140366861	chr4:140366239-140366861	7	-	140366239	140366239	16724991	1	622,	0,
#Partially deleted in new
chr4	140373473	140381575	chr4:140373473-140381575	1	+	140379170	140381104	789624	4	71,72,84,614,	0,5647,6095,7488,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	140373509	140385726	chr4:140373509-140385726	1	+	140373536	140381104	0	4	208,72,84,4765,	0,5611,6059,7452,
#Partially deleted in new
chr4	140373509	140382556	chr4:140373509-140382556	1	+	140373536	140381104	0	4	208,72,84,1595,	0,5611,6059,7452,
#Partially deleted in new
chr4	140373535	140382545	chr4:140373535-140382545	1	+	140373536	140381104	0	3	182,72,1584,	0,5585,7426,
#Partially deleted in new
chr4	140373642	140382525	chr4:140373642-140382525	1	+	140379170	140381104	789624	4	75,72,84,1564,	0,5478,5926,7319,
#Partially deleted in new
chr4	140373648	140382549	chr4:140373648-140382549	1	+	140379170	140381104	789624	5	69,380,72,84,1588,	0,288,5472,5920,7313,
#Partially deleted in new
chr4	140376420	140381126	chr4:140376420-140381126	1	+	140379170	140381104	789624	4	358,72,84,165,	0,2700,3148,4541,
#Partially deleted in new
chr4	140388454	140427968	chr4:140388454-140427968	3	-	140389223	140413078	789624	15	850,101,160,126,216,151,114,190,193,82,142,59,74,153,432,	0,2173,3764,4131,5371,7364,7637,10396,11902,13530,17487,21382,22098,24480,39082,
#Partially deleted in new
chr4	140388454	140427661	chr4:140388454-140427661	1	-	140389223	140413078	789624	16	850,101,160,126,216,151,114,190,193,82,142,59,74,153,84,125,	0,2173,3764,4131,5371,7364,7637,10396,11902,13530,17487,21382,22098,24480,38249,39082,
#Partially deleted in new
chr4	140400511	140427610	chr4:140400511-140427610	0	-	140400511	140413078	789624	8	38,82,142,59,74,153,84,74,	0,1473,5430,9325,10041,12423,26192,27025,
#Partially deleted in new
chr4	140442261	140498353	chr4:140442261-140498353	1	-	140443435	140498222	789624	5	1183,108,131,159,225,	0,9148,14327,40065,55867,
#Partially deleted in new
chr4	140443197	140498252	chr4:140443197-140498252	0	-	140443197	140443197	8553170	6	247,108,131,114,47,124,	0,8212,13391,21698,28577,54931,
#Partially deleted in new
chr4	140443217	140459567	chr4:140443217-140459567	0	-	140443435	140459567	789624	4	227,108,101,56,	0,8192,13401,16294,
#Partially deleted in new
chr4	140443420	140498370	chr4:140443420-140498370	0	-	140464992	140498222	789624	7	24,108,131,115,76,114,242,	0,7989,13168,16091,18508,21475,54708,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	140443432	140498332	chr4:140443432-140498332	0	-	140443432	140443432	8553170	8	12,108,3038,76,184,114,47,204,	0,7977,13156,18496,19057,21463,28342,54696,
#Partially deleted in new
chr4	140443435	140498222	chr4:140443435-140498222	3	-	140443435	140498222	789624	11	9,108,131,115,76,114,47,134,138,159,94,	0,7974,13153,16076,18493,21460,28339,31377,36054,38891,54693,
#Partially deleted in new
chr4	140449955	140498222	chr4:140449955-140498222	1	-	140450108	140498222	789624	11	165,108,131,115,76,114,47,134,138,159,94,	0,1454,6633,9556,11973,14940,21819,24857,29534,32371,48173,
#Partially deleted in new
chr4	140464944	140498330	chr4:140464944-140498330	0	-	140464944	140498222	789624	4	65,47,134,202,	0,6830,9868,33184,
#Partially deleted in new
chr4	140464980	140498377	chr4:140464980-140498377	0	-	140464980	140464980	8553170	4	29,47,159,249,	0,6794,17346,33148,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	140498401	140501330	chr4:140498401-140501330	3	+	140498401	140498401	8553170	1	2929,	0,
#Partially deleted in new
chr4	140524157	140553770	chr4:140524157-140553770	3	+	140525428	140550375	789624	9	123,151,29,98,130,134,69,134,3541,	0,1262,3308,11575,13254,16010,18416,19295,26072,
#Partially deleted in new
chr4	140524167	140527952	chr4:140524167-140527952	1	+	140525428	140527503	789624	3	113,151,487,	0,1252,3298,
#Partially deleted in new
chr4	140524181	140525533	chr4:140524181-140525533	0	+	140525428	140525533	789624	2	480,114,	0,1238,
#Partially deleted in new
chr4	140524217	140527951	chr4:140524217-140527951	0	+	140524217	140524217	8553170	2	1353,486,	0,3248,
#Partially deleted in new
chr4	140524435	140540271	chr4:140524435-140540271	0	+	140525428	140540271	789624	6	226,151,29,98,130,104,	0,984,3030,11297,12976,15732,
#Partially deleted in new
chr4	140526641	140540289	chr4:140526641-140540289	0	+	140535792	140540289	789624	5	156,29,98,130,122,	0,824,9091,10770,13526,
#Partially deleted in new
chr4	140535416	140543472	chr4:140535416-140543472	0	+	140535416	140535416	8553170	5	414,130,134,69,20,	0,1995,4751,7157,8036,
#Partially deleted in new
chr4	140542424	140550435	chr4:140542424-140550435	0	+	140542424	140542424	8553170	3	218,134,206,	0,1028,7805,
#Partially deleted in new
chr4	140559433	140568805	chr4:140559433-140568805	3	-	140559895	140568729	789624	6	577,181,102,201,199,202,	0,2759,3676,3884,8345,9170,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	140577924	140578222	chr4:140577924-140578222	3	+	140577924	140577924	8553170	1	298,	0,
#Deleted in new
chr4	140600400	140600575	chr4:140600400-140600575	7	-	140600400	140600400	16724991	1	175,	0,
#Partially deleted in new
chr4	140620764	140756120	chr4:140620764-140756120	3	-	140622194	140756045	789624	21	2153,104,75,87,66,241,69,99,130,286,118,215,151,171,207,208,262,229,119,111,205,	0,3351,3549,6676,7535,13183,18321,18565,36332,36762,38823,41128,48152,48869,49955,56129,58177,58850,65579,80739,135151,
#Deleted in new
chr4	140641839	140645489	chr4:140641839-140645489	7	-	140641839	140641839	16724991	1	3650,	0,
#Partially deleted in new
chr4	140659416	140661963	chr4:140659416-140661963	0	-	140659416	140659416	8553170	2	289,71,	0,2476,
#Partially deleted in new
chr4	140670593	140677101	chr4:140670593-140677101	0	-	140670593	140670593	8553170	2	333,208,	0,6300,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	140700834	140700942	chr4:140700834-140700942	3	-	140700834	140700834	8553170	1	108,	0,
#Partially deleted in new
chr4	140712167	140716081	chr4:140712167-140716081	3	+	140712167	140712167	8553170	2	116,286,	0,3628,
#Partially deleted in new
chr4	140756527	140757921	chr4:140756527-140757921	3	+	140756527	140756527	8553170	1	1394,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	140779038	140779141	chr4:140779038-140779141	3	-	140779038	140779038	8553170	1	103,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	140859806	141132842	chr4:140859806-141132842	3	-	140868260	141132808	789624	7	8573,211,97,83,72,251,518,	0,51337,66170,87847,89494,107816,272518,
#Partially deleted in new
chr4	140865570	141133462	chr4:140865570-141133462	1	-	140868260	141132808	789624	7	2809,211,97,83,72,125,1138,	0,45573,60406,82083,83730,102178,266754,
#Partially deleted in new
chr4	140911052	141133049	chr4:140911052-141133049	1	-	140911123	141132808	789624	6	302,97,83,72,251,725,	0,14924,36601,38248,56570,221272,
#Partially deleted in new
chr4	140911143	140997036	chr4:140911143-140997036	0	-	140911143	140967850	789624	6	211,97,83,72,251,79,	0,14833,36510,38157,56479,85814,
#Partially deleted in new
chr4	140944548	140967870	chr4:140944548-140967870	0	-	140944548	140944548	8553170	4	262,83,72,248,	0,3105,4752,23074,
#Partially deleted in new
chr4	141220886	141234697	chr4:141220886-141234697	3	+	141222371	141233989	789624	10	222,126,20,71,80,127,105,47,118,983,	0,1479,3600,3720,5880,8684,9279,10552,11638,12828,
#Deleted in new
chr4	141220886	141222876	chr4:141220886-141222876	0	+	141220886	141220886	8553170	2	222,511,	0,1479,
#Partially deleted in new
chr4	141220899	141232589	chr4:141220899-141232589	0	+	141222371	141224488	789624	9	209,112,20,71,80,127,105,47,65,	0,1466,3587,3707,5867,8671,9266,10539,11625,
#Partially deleted in new
chr4	141220910	141232642	chr4:141220910-141232642	0	+	141222371	141232642	789624	9	144,126,20,71,80,127,105,47,118,	0,1455,3576,3696,5856,8660,9255,10528,11614,
#Deleted in new
chr4	141220927	141224019	chr4:141220927-141224019	0	+	141222371	141223774	789624	3	181,126,251,	0,1438,2841,
#Partially deleted in new
chr4	141220929	141229698	chr4:141220929-141229698	0	+	141222371	141229698	789624	6	148,126,20,71,80,128,	0,1436,3557,3677,5837,8641,
#Partially deleted in new
chr4	141220929	141230206	chr4:141220929-141230206	0	+	141222371	141230206	789624	7	87,126,20,71,80,127,41,	0,1436,3557,3677,5837,8641,9236,
#Partially deleted in new
chr4	141220933	141234096	chr4:141220933-141234096	0	+	141222371	141229584	789624	9	175,126,20,80,127,105,47,118,382,	0,1432,3553,5833,8637,9232,10505,11591,12781,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	141240738	141278789	chr4:141240738-141278789	3	-	141240738	141240738	8553170	3	591,100,346,	0,33602,37705,
#Partially deleted in new
chr4	141319449	141323562	chr4:141319449-141323562	0	-	141319449	141319449	8553170	2	451,141,	0,3972,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	141321128	141326007	chr4:141321128-141326007	1	-	141321128	141321128	8553170	2	253,2586,	0,2293,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	141323470	141332618	chr4:141323470-141332618	3	-	141323470	141323470	8553170	3	148,111,460,	0,1331,8688,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	141405171	141407586	chr4:141405171-141407586	7	+	141405171	141405171	16724991	1	2415,	0,
#Partially deleted in new
chr4	141430830	141431284	chr4:141430830-141431284	3	+	141430830	141430830	8553170	1	454,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	141569930	141576077	chr4:141569930-141576077	3	-	141569930	141569930	8553170	2	52,86,	0,6061,
#Partially deleted in new
chr4	141636598	141733435	chr4:141636598-141733435	1	+	141719464	141732848	0	8	150,122,111,98,85,45,138,698,	0,19587,82767,83870,85325,91341,93248,96139,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	141636601	141733987	chr4:141636601-141733987	3	+	141719464	141732848	0	8	623,122,111,98,85,45,138,1250,	0,19584,82764,83867,85322,91338,93245,96136,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	141636725	141733182	chr4:141636725-141733182	1	+	141721148	141732848	0	10	23,122,214,99,98,119,85,45,138,445,	0,19460,52096,82652,83743,84333,85198,91214,93121,96012,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	141636946	141733123	chr4:141636946-141733123	1	+	141719464	141732848	0	8	278,214,111,98,85,45,138,386,	0,51875,82419,83522,84977,90993,92900,95791,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	141714656	141733458	chr4:141714656-141733458	1	+	141721148	141732848	0	7	4820,98,119,85,45,138,721,	0,5812,6402,7267,13283,15190,18081,
#Deleted in new
chr4	141719130	141720767	chr4:141719130-141720767	0	+	141719130	141719130	8553170	2	346,299,	0,1338,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	141721148	141733985	chr4:141721148-141733985	1	+	141721148	141732848	0	5	29,85,45,138,1248,	0,775,6791,8698,11589,
#Partially deleted in new
chr4	141721781	141727984	chr4:141721781-141727984	0	+	141721781	141721781	8553170	2	227,45,	0,6158,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr4	142023159	142846290	chr4:142023159-142846290	3	-	142028781	142431259	789624	27	5755,155,113,98,141,118,124,173,157,204,178,109,105,131,148,73,112,80,51,117,119,45,217,64,99,63,82,	0,58871,62984,84933,89382,98968,100132,101428,122680,137198,150472,169927,185265,185736,214704,237332,247503,282298,291552,379778,382046,406013,408009,439503,444797,702679,823049,
#Partially deleted in new
chr4	142028032	142462753	chr4:142028032-142462753	1	-	142028781	142431259	789624	24	882,155,113,98,141,118,124,173,157,204,178,109,105,131,148,73,112,80,51,117,119,45,217,91,	0,53998,58111,80060,84509,94095,95259,96555,117807,132325,145599,165054,180392,180863,209831,232459,242630,277425,286679,374905,377173,401140,403136,434630,
#Partially deleted in new
chr4	142028744	142473415	chr4:142028744-142473415	1	-	142028781	142431259	789624	25	170,155,113,98,141,118,124,173,157,204,178,109,105,131,148,73,112,80,51,117,119,45,217,64,163,	0,53286,57399,79348,83797,93383,94547,95843,117095,131613,144887,164342,179680,180151,209119,231747,241918,276713,285967,374193,376461,400428,402424,433918,444508,
#Partially deleted in new
chr4	142028955	142846300	chr4:142028955-142846300	1	-	142030127	142431259	789624	26	1347,155,113,98,141,118,124,173,157,204,178,109,105,131,148,73,112,80,51,117,119,45,217,64,63,92,	0,53075,57188,79137,83586,93172,94336,95632,116884,131402,144676,164131,179469,179940,208908,231536,241707,276502,285756,373982,376250,400217,402213,433707,696883,817253,
#Partially deleted in new
chr4	142082052	142305944	chr4:142082052-142305944	0	-	142082052	142270722	789624	18	133,113,98,141,118,124,173,157,204,178,109,105,131,148,73,112,80,68,	0,4091,26040,30489,40075,41239,42535,63787,78305,91579,111034,126372,126843,155811,178439,188610,223405,223824,
#Partially deleted in new
chr4	142082068	142514295	chr4:142082068-142514295	0	-	142173717	142431259	789624	25	117,113,109,98,141,118,124,173,157,204,178,109,83,131,148,73,112,80,51,117,119,45,217,64,72,	0,4075,14016,26024,30473,40059,41223,42519,63771,78289,91563,111018,126378,126827,155795,178423,188594,223389,232643,320869,323137,347104,349100,380594,432155,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr4	142086178	142560669	chr4:142086178-142560669	0	-	142086178	142431259	789624	23	78,98,141,118,124,173,157,204,178,109,105,131,148,73,112,80,51,117,119,45,217,64,213,	0,21914,26363,35949,37113,38409,59661,74179,87453,106908,122246,122717,151685,174313,184484,219279,228533,316759,319027,342994,344990,376484,474278,
#Partially deleted in new
chr4	142086185	142305832	chr4:142086185-142305832	0	-	142086185	142305735	789624	17	71,98,141,118,124,173,157,204,178,109,105,131,148,73,112,80,133,	0,21907,26356,35942,37106,38402,59654,74172,87446,106901,122239,122710,151678,174306,184477,219272,219514,
#Partially deleted in new
chr4	142237863	142403009	chr4:142237863-142403009	0	-	142347526	142403009	789624	7	148,73,112,80,51,183,72,	0,22628,32799,67594,76848,109510,165074,
#Partially deleted in new
chr4	142270662	142405260	chr4:142270662-142405260	0	-	142384092	142405260	789624	6	112,80,51,155,117,55,	0,34795,44049,113299,132275,134543,
#Deleted in new
chr4	142286916	142287625	chr4:142286916-142287625	7	-	142286916	142286916	16724991	1	709,	0,
#Deleted in new
chr4	142317237	142317546	chr4:142317237-142317546	7	+	142317237	142317237	16724991	1	309,	0,
#Partially deleted in new
chr4	142383815	142431259	chr4:142383815-142431259	1	-	142384092	142431259	789624	5	301,117,119,45,91,	0,19122,21390,45357,47353,
#Partially deleted in new
chr4	142405208	142847432	chr4:142405208-142847432	0	-	142405208	142431259	789624	6	116,45,217,64,63,58,	0,23964,25960,57454,320630,442166,
#Partially deleted in new
chr4	142405224	142514288	chr4:142405224-142514288	0	-	142405224	142405224	8553170	6	100,57,45,217,64,65,	0,19982,23948,25944,57438,108999,
#Partially deleted in new
chr4	142405304	142514281	chr4:142405304-142514281	0	-	142423809	142431259	789624	6	20,122,45,217,64,58,	0,18391,23868,25864,57358,108919,
#Partially deleted in new
chr4	142423779	142514288	chr4:142423779-142514288	0	-	142423779	142423779	8553170	7	38,57,45,217,64,37,65,	0,1427,5393,7389,38883,73129,90444,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	142425206	142514299	chr4:142425206-142514299	0	-	142425206	142425206	8553170	6	57,45,217,64,99,76,	0,3966,5962,37456,42750,89017,
#Partially deleted in new
chr4	142426480	142474408	chr4:142426480-142474408	1	-	142427451	142431259	789624	5	997,45,217,64,183,	0,2692,4688,36182,47745,
#Partially deleted in new
chr4	142427451	142462728	chr4:142427451-142462728	1	-	142427451	142431259	789624	4	26,45,217,66,	0,1721,3717,35211,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	142514445	142518983	chr4:142514445-142518983	3	+	142514445	142514445	8553170	2	159,281,	0,4257,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	142766737	142767969	chr4:142766737-142767969	0	-	142766737	142766737	8553170	2	100,138,	0,1094,
#Partially deleted in new
chr4	142795151	142846331	chr4:142795151-142846331	0	-	142795151	142795151	8553170	2	462,123,	0,51057,
#Partially deleted in new
chr4	142933194	143184861	chr4:142933194-143184861	3	-	142933194	142933194	8553170	3	68,157,354,	0,6894,251313,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	143045085	143045878	chr4:143045085-143045878	7	+	143045085	143045085	16724991	1	793,	0,
#Partially deleted in new
chr4	143184916	143215577	chr4:143184916-143215577	1	+	143185450	143214991	0	9	1216,136,130,102,159,194,94,107,1997,	0,2909,10799,12906,18491,21116,24647,27401,28664,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	143184944	143223830	chr4:143184944-143223830	3	+	143185450	143220456	0	10	1188,136,130,102,159,194,94,107,1363,3536,	0,2881,10771,12878,18463,21088,24619,27373,28636,35350,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	143309465	143309566	chr4:143309465-143309566	3	+	143309465	143309465	8553170	1	101,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	143336761	143474568	chr4:143336761-143474568	3	+	143337188	143469189	0	11	499,295,226,602,86,304,90,94,124,123,5538,	0,78715,96729,101237,103040,103317,120918,122623,123602,129341,132269,
#Partially deleted in new
chr4	143336886	143469450	chr4:143336886-143469450	1	+	143337188	143469189	0	10	374,295,226,602,86,304,94,124,123,420,	0,78590,96604,101112,102915,103192,122498,123477,129216,132144,
#Partially deleted in new
chr4	143337177	143438041	chr4:143337177-143438041	0	+	143337188	143438041	789624	5	83,295,226,81,43,	0,78299,96313,96910,100821,
#Deleted in new
chr4	143343459	143343535	chr4:143343459-143343535	3	+	143343459	143343459	5263520	1	76,	0,
#Deleted in new
chr4	143349274	143350117	chr4:143349274-143350117	7	-	143349274	143349274	16724991	1	843,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	143376824	143433577	chr4:143376824-143433577	0	+	143415713	143433577	789624	4	72,128,295,87,	0,3787,38652,56666,
#Partially deleted in new
chr4	143381944	143469567	chr4:143381944-143469567	1	+	143415713	143469189	789624	10	86,295,226,602,86,304,94,124,123,537,	0,33532,51546,56054,57857,58134,77440,78419,84158,87086,
#Partially deleted in new
chr4	143381947	143395720	chr4:143381947-143395720	0	+	143381947	143381947	8553170	3	83,189,904,	0,9496,12869,
#Partially deleted in new
chr4	143391509	143433716	chr4:143391509-143433716	0	+	143395980	143433716	789624	4	49,173,295,226,	0,4307,23967,41981,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	143424752	143426013	chr4:143424752-143426013	7	+	143424752	143424752	16724991	1	1261,	0,
#Partially deleted in new
chr4	143425051	143425920	chr4:143425051-143425920	5	+	143425051	143425051	16724991	1	869,	0,
#Partially deleted in new
chr4	143433490	143469407	chr4:143433490-143469407	0	+	143433490	143469212	789624	2	226,244,	0,35673,
#Partially deleted in new
chr4	143438256	143440016	chr4:143438256-143440016	0	+	143438256	143438256	8553170	2	344,215,	0,1545,
#Partially deleted in new
chr4	143439649	143459429	chr4:143439649-143459429	0	+	143439649	143439649	8553170	4	238,304,90,45,	0,429,18030,19735,
#Partially deleted in new
chr4	143439672	143459433	chr4:143439672-143459433	0	+	143439672	143439672	8553170	3	215,304,49,	0,406,19712,
#Partially deleted in new
chr4	143440172	143466175	chr4:143440172-143466175	0	+	143440172	143440172	8553170	5	210,90,94,124,59,	0,17507,19212,20191,25944,
#Partially deleted in new
chr4	143465996	143469639	chr4:143465996-143469639	0	+	143465996	143465996	8553170	2	229,609,	0,3034,
#Partially deleted in new
chr4	143497411	143498126	chr4:143497411-143498126	7	-	143497411	143497411	16724991	2	309,62,	0,653,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr4	143513462	143557486	chr4:143513462-143557486	3	+	143513924	143553184	789624	24	639,75,167,101,101,180,156,132,69,110,227,122,153,133,149,120,111,114,123,133,119,213,108,4368,	0,3892,7966,10904,11988,12818,14405,15120,16995,21392,22989,25127,25323,26900,30046,30390,31274,32007,32462,33313,33922,34465,36534,39656,
#Partially deleted in new
chr4	143513471	143514635	chr4:143513471-143514635	3	-	143513471	143513471	789624	2	754,191,	0,973,
#Partially deleted in new
chr4	143543632	143544356	chr4:143543632-143544356	0	+	143543632	143543632	8553170	2	25,504,	0,220,
#Partially deleted in new
chr4	143547431	143548218	chr4:143547431-143548218	0	+	143547431	143547431	8553170	2	72,291,	0,496,
#Partially deleted in new
chr4	143555081	143555402	chr4:143555081-143555402	7	-	143555081	143555081	16724991	1	321,	0,
#Partially deleted in new
chr4	143555123	143555583	chr4:143555123-143555583	5	-	143555123	143555123	16724991	1	460,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	143559456	143913947	chr4:143559456-143913947	1	+	143559456	143559456	8553170	7	692,169,143,100,105,106,1408,	0,12956,179518,299559,301685,306514,353083,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	143559471	143561460	chr4:143559471-143561460	7	+	143559471	143559471	16724991	1	1989,	0,
#Partially deleted in new
chr4	143559486	143560064	chr4:143559486-143560064	5	+	143559486	143559486	16724991	1	578,	0,
#Partially deleted in new
chr4	143559694	143572724	chr4:143559694-143572724	0	+	143559694	143559694	8553170	2	454,312,	0,12718,
#Partially deleted in new
chr4	143560126	143649305	chr4:143560126-143649305	1	+	143560126	143560126	8553170	4	22,169,71,80,	0,12286,84958,89099,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	143572412	143573674	chr4:143572412-143573674	0	+	143572412	143572412	8553170	2	169,304,	0,958,
#Partially deleted in new
chr4	143577301	143700675	chr4:143577301-143700675	3	-	143577610	143700675	789624	8	551,150,249,126,231,147,90,5185,	0,8542,33977,43735,46806,50312,115811,118189,
#Partially deleted in new
chr4	143601818	143621052	chr4:143601818-143621052	0	-	143601818	143601818	8553170	3	140,249,16,	0,9460,19218,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	143700256	143865072	chr4:143700256-143865072	1	+	143700256	143700256	8553170	7	35,143,57,56,100,105,70,	0,38718,108057,132303,158759,160885,164746,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	143700733	143982274	chr4:143700733-143982274	1	+	143700733	143700733	8553170	8	107,143,106,92,110,142,103,489,	0,38241,165237,266354,269691,272376,279116,281052,
#Partially deleted in new
chr4	143760398	143762093	chr4:143760398-143762093	7	-	143760398	143760398	16724991	2	607,564,	0,1131,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	143859025	143982607	chr4:143859025-143982607	0	+	143859025	143859025	8553170	6	90,105,106,142,103,822,	0,2116,6945,114084,120824,122760,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	143870866	143905559	chr4:143870866-143905559	3	-	143876754	143905507	789624	4	1386,110,99,89,	0,5879,9544,34604,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	143870895	143905519	chr4:143870895-143905519	0	-	143873431	143905507	789624	4	1357,119,99,49,	0,2461,9515,34575,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	143875312	143905563	chr4:143875312-143905563	1	-	143876754	143905507	789624	4	197,110,99,93,	0,1433,5098,30158,
#Deleted in new
chr4	143911513	143912053	chr4:143911513-143912053	7	-	143911513	143911513	16724991	1	540,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	143912330	143982454	chr4:143912330-143982454	1	+	143912330	143912330	789624	7	119,99,57,114,142,103,669,	0,209,25536,58094,60779,67519,69455,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	143912330	144104040	chr4:143912330-144104040	1	+	143912330	143912330	8553170	8	308,69,102,105,106,78,199,25,	0,169827,170760,172871,177695,182966,190985,191685,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	143937866	143981916	chr4:143937866-143981916	0	+	143937866	143937866	8553170	4	57,63,159,131,	0,41053,41927,43919,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	143977231	143981916	chr4:143977231-143981916	1	+	143977231	143977231	8553170	4	499,63,103,131,	0,1688,2618,4554,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	143996103	144019337	chr4:143996103-144019337	1	-	143997544	144019287	789624	5	201,19,39,99,87,	0,1436,3307,5081,23147,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	143996103	144019339	chr4:143996103-144019339	0	-	144001274	144019287	789624	6	201,95,39,99,83,89,	0,1436,3307,5081,20698,23147,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	143996105	144019339	chr4:143996105-144019339	3	-	143996298	144019287	789624	5	199,95,39,99,89,	0,1434,3305,5079,23145,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	143996141	144019337	chr4:143996141-144019337	0	-	143996141	143996141	8553170	4	163,39,99,87,	0,3269,5043,23109,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	143996152	144019324	chr4:143996152-144019324	0	-	144002593	144019287	789624	6	152,95,39,99,124,74,	0,1387,3258,5032,6418,23098,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	143996152	144019324	chr4:143996152-144019324	1	-	143996298	144019287	789624	4	152,95,39,74,	0,1387,3258,23098,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	143997338	144019302	chr4:143997338-144019302	0	-	143997338	143997338	8553170	4	296,39,99,52,	0,2072,3846,21912,
#Partially deleted in new
chr4	143997539	144019287	chr4:143997539-144019287	1	-	143997539	144019287	789624	5	95,39,93,99,37,	0,1871,2843,3645,21711,
#Partially deleted in new
chr4	143999255	144019345	chr4:143999255-144019345	0	-	143999255	143999255	8553170	3	194,99,95,	0,1929,19995,
#Partially deleted in new
chr4	144000059	144019345	chr4:144000059-144019345	0	-	144000059	144000059	8553170	3	416,99,95,	0,1125,19191,
#Partially deleted in new
chr4	144012447	144019333	chr4:144012447-144019333	0	-	144012447	144012447	8553170	2	306,83,	0,6803,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	144078934	144120483	chr4:144078934-144120483	1	+	144078934	144078934	8553170	11	104,69,158,105,106,78,199,80,54,123,735,	0,3223,4100,6267,11091,16362,24381,25081,36241,39305,40814,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	144089900	144188367	chr4:144089900-144188367	3	+	144089900	144089900	8553170	9	231,78,199,80,54,123,99,165,4008,	0,5396,13415,14115,25275,28339,54216,91660,94459,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	144109302	144127908	chr4:144109302-144127908	1	-	144111393	144127908	789624	7	2108,79,86,39,96,99,31,	0,5386,7551,9411,10383,11187,18575,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	144109302	144140786	chr4:144109302-144140786	3	-	144111393	144140635	789624	7	2108,79,86,39,96,99,188,	0,5386,7551,9411,10383,11187,31296,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	144109303	144140751	chr4:144109303-144140751	1	-	144111393	144140635	789624	7	2107,79,86,39,96,99,153,	0,5385,7550,9410,10382,11186,31295,
#Partially deleted in new
chr4	144110850	144140674	chr4:144110850-144140674	1	-	144111329	144140635	789624	6	560,86,39,96,99,76,	0,6003,7863,8835,9639,29748,
#Partially deleted in new
chr4	144110918	144114905	chr4:144110918-144114905	0	-	144110918	144110918	8553170	2	492,217,	0,3770,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	144111038	144870953	chr4:144111038-144870953	1	-	144111038	144111038	8553170	15	372,79,86,39,96,99,161,241,49,82,70,92,76,129,93,	0,3650,5815,7675,8647,9451,94982,99734,102030,105054,109664,172056,304864,644118,759822,
#Partially deleted in new
chr4	144111054	144140693	chr4:144111054-144140693	1	-	144111393	144140635	789624	6	356,79,86,39,96,95,	0,3634,5799,7659,8631,29544,
#Partially deleted in new
chr4	144111343	144140674	chr4:144111343-144140674	1	-	144111393	144127908	789624	8	67,79,86,39,96,99,158,76,	0,3345,5510,7370,8342,9146,16534,29255,
#Partially deleted in new
chr4	144111343	144140674	chr4:144111343-144140674	1	-	144111393	144120547	789624	8	67,79,86,39,96,99,180,76,	0,3345,5510,7370,8342,9146,26817,29255,
#Partially deleted in new
chr4	144111344	144140672	chr4:144111344-144140672	0	-	144120579	144140635	789624	8	66,79,86,39,96,99,83,74,	0,3344,5509,7369,8341,9145,26816,29254,
#Partially deleted in new
chr4	144111349	144140672	chr4:144111349-144140672	1	-	144111393	144140635	789624	4	61,79,86,74,	0,3339,5504,29249,
#Partially deleted in new
chr4	144111349	144140674	chr4:144111349-144140674	0	-	144111349	144111349	8553170	3	61,79,76,	0,3339,29249,
#Partially deleted in new
chr4	144111354	144140661	chr4:144111354-144140661	1	-	144111393	144120547	789624	8	56,79,86,39,96,99,118,63,	0,3334,5499,7359,8331,9135,11517,29244,
#Partially deleted in new
chr4	144111354	144140672	chr4:144111354-144140672	0	-	144111354	144140635	789624	5	56,86,39,96,74,	0,5499,7359,8331,29244,
#Partially deleted in new
chr4	144111366	144140635	chr4:144111366-144140635	1	-	144111393	144140635	789624	6	44,79,86,96,99,37,	0,3322,5487,8319,9123,29232,
#Partially deleted in new
chr4	144111393	144140635	chr4:144111393-144140635	1	-	144111393	144140635	789624	5	17,79,86,99,37,	0,3295,5460,9096,29205,
#Partially deleted in new
chr4	144111393	144140635	chr4:144111393-144140635	1	-	144111393	144140635	789624	6	17,79,86,39,99,37,	0,3295,5460,7320,9096,29205,
#Partially deleted in new
chr4	144111393	144140635	chr4:144111393-144140635	1	-	144111393	144140635	789624	5	17,79,86,39,37,	0,3295,5460,7320,29205,
#Partially deleted in new
chr4	144118563	144140693	chr4:144118563-144140693	0	-	144118563	144118563	8553170	3	189,99,95,	0,1926,22035,
#Partially deleted in new
chr4	144119362	144140693	chr4:144119362-144140693	0	-	144119362	144119362	8553170	3	419,99,95,	0,1127,21236,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	144133040	144140697	chr4:144133040-144140697	0	-	144133040	144133040	8553170	2	524,99,	0,7558,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	144210700	145098174	chr4:144210700-145098174	3	-	144415945	145096099	8553170	9	313,82,70,92,76,121,91,127,918,	0,5392,10002,72394,205202,853871,870959,885284,886556,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	144505899	144509001	chr4:144505899-144509001	3	+	144505899	144505899	8553170	1	3102,	0,
#Deleted in new
chr4	144572237	144572983	chr4:144572237-144572983	7	+	144572237	144572237	16724991	1	746,	0,
#Deleted in new
chr4	144642921	144645987	chr4:144642921-144645987	0	-	144642921	144642921	789624	2	813,281,	0,2785,
#Deleted in new
chr4	144643223	144645912	chr4:144643223-144645912	1	-	144643223	144643223	8553170	3	511,180,206,	0,2064,2483,
#Partially deleted in new
chr4	144643371	144661357	chr4:144643371-144661357	3	-	144643371	144643371	8553170	4	363,75,125,83,	0,9330,16243,17903,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	144646020	144745271	chr4:144646020-144745271	3	+	144646675	144737957	0	13	934,193,157,202,152,174,144,122,124,131,82,149,7508,	0,6584,12769,13616,60510,61066,62147,65929,68204,69279,72854,88720,91743,
#Partially deleted in new
chr4	144646171	144660273	chr4:144646171-144660273	1	+	144646675	144659970	0	4	783,193,157,637,	0,6433,12618,13465,
#Partially deleted in new
chr4	144647098	144659776	chr4:144647098-144659776	0	+	144647098	144647098	8553170	4	129,193,85,140,	0,5506,11763,12538,
#Partially deleted in new
chr4	144648179	144659856	chr4:144648179-144659856	0	+	144648179	144648179	8553170	5	577,193,151,157,220,	0,4425,6703,10610,11457,
#Partially deleted in new
chr4	144650614	144658839	chr4:144650614-144658839	0	+	144650614	144650614	8553170	3	342,193,50,	0,1990,8175,
#Partially deleted in new
chr4	144652658	144685665	chr4:144652658-144685665	0	+	144652658	144652658	8553170	4	139,157,202,65,	0,6131,6978,32942,
#Partially deleted in new
chr4	144708130	144715623	chr4:144708130-144715623	0	+	144708130	144708130	8553170	5	181,122,124,73,324,	0,3819,6094,6870,7169,
#Partially deleted in new
chr4	144734866	144738893	chr4:144734866-144738893	0	+	144734866	144734866	8553170	3	23,129,175,	0,2897,3852,
#Deleted in new
chr4	144739761	144739941	chr4:144739761-144739941	3	-	144739761	144739761	8553170	1	180,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	144831907	145098214	chr4:144831907-145098214	0	-	144870914	145096099	789624	6	1011,93,121,91,127,95,	0,38953,232664,249752,264077,266212,
#Deleted in new
chr4	144845624	144847344	chr4:144845624-144847344	7	+	144845624	144845624	16724991	1	1720,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	144851571	144874787	chr4:144851571-144874787	3	+	144851571	144851571	8553170	2	121,2686,	0,20530,
#Deleted in new
chr4	144920712	144921164	chr4:144920712-144921164	7	-	144920712	144920712	16724991	1	452,	0,
#Partially deleted in new
chr4	144967111	145098213	chr4:144967111-145098213	0	-	144967111	144967111	8553170	5	49,121,91,127,83,	0,97460,114548,128873,131019,
#Partially deleted in new
chr4	144994574	145098541	chr4:144994574-145098541	3	-	144995372	145096099	0	5	1029,121,91,127,306,	0,69997,87085,101410,103661,
#Partially deleted in new
chr4	144994924	145098216	chr4:144994924-145098216	0	-	144994924	144994924	789624	3	679,91,97,	0,86735,103195,
#Partially deleted in new
chr4	144994999	145098201	chr4:144994999-145098201	1	-	144995372	145096099	0	5	604,121,91,127,82,	0,69572,86660,100985,103120,
#Partially deleted in new
chr4	144995157	145098213	chr4:144995157-145098213	1	-	144995372	145096099	0	5	446,121,91,127,83,	0,69414,86502,100827,102973,
#Partially deleted in new
chr4	144995157	145098189	chr4:144995157-145098189	1	-	144995372	145096099	0	6	446,121,91,127,73,70,	0,69414,86502,100827,102530,102962,
#Partially deleted in new
chr4	144995195	145098191	chr4:144995195-145098191	0	-	144995195	144995195	8553170	4	408,91,127,61,	0,86464,100789,102935,
#Partially deleted in new
chr4	144995454	145098541	chr4:144995454-145098541	0	-	144995454	145096099	789624	5	149,121,91,127,306,	0,69117,86205,100530,102781,
#Partially deleted in new
chr4	144995455	145098180	chr4:144995455-145098180	0	-	144995455	145096099	789624	7	148,121,91,127,68,73,61,	0,69116,86204,100529,102039,102232,102664,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	145035131	145035436	chr4:145035131-145035436	3	+	145035131	145035131	8553170	1	305,	0,
#Partially deleted in new
chr4	145053678	145097751	chr4:145053678-145097751	1	-	145053726	145096099	789624	5	102,121,91,127,64,	0,10893,27981,42306,44009,
#Partially deleted in new
chr4	145063985	145098164	chr4:145063985-145098164	0	-	145063985	145063985	8553170	5	376,121,91,127,34,	0,586,17674,31999,34145,
#Partially deleted in new
chr4	145064571	145097382	chr4:145064571-145097382	0	-	145064571	145096099	789624	4	121,91,127,138,	0,17088,31413,32673,
#Partially deleted in new
chr4	145081542	145098167	chr4:145081542-145098167	0	-	145081542	145081542	8553170	3	208,127,480,	0,14442,16145,
#Partially deleted in new
chr4	145081588	145098183	chr4:145081588-145098183	0	-	145081588	145081588	8553170	4	162,127,68,496,	0,14396,15906,16099,
#Partially deleted in new
chr4	145081659	145098135	chr4:145081659-145098135	0	-	145081659	145096099	789624	5	91,127,68,73,249,	0,14325,15835,16028,16227,
#Partially deleted in new
chr4	145097931	145129179	chr4:145097931-145129179	3	+	145104412	145127573	789624	18	488,130,86,98,118,138,70,97,90,122,222,60,59,111,143,123,112,1654,	0,6454,7673,10083,11200,12171,12443,13036,14307,19361,22000,23242,23401,25089,25283,25546,27058,29594,
#Partially deleted in new
chr4	145098287	145110984	chr4:145098287-145110984	0	+	145104412	145110984	789624	8	132,127,86,98,118,138,70,17,	0,6101,7317,9727,10844,11815,12087,12680,
#Partially deleted in new
chr4	145098310	145123305	chr4:145098310-145123305	0	+	145098310	145098310	8553170	7	109,130,222,60,59,111,91,	0,6075,21621,22863,23022,24710,24904,
#Partially deleted in new
chr4	145098313	145123538	chr4:145098313-145123538	0	+	145098313	145098313	8553170	4	106,111,143,61,	0,24707,24901,25164,
#Partially deleted in new
chr4	145108026	145117415	chr4:145108026-145117415	0	+	145108026	145112270	789624	6	86,118,138,70,90,123,	0,1105,2076,2348,4212,9266,
#Partially deleted in new
chr4	145110837	145179641	chr4:145110837-145179641	0	-	145110837	145110837	8553170	22	291,179,41,261,139,81,56,124,163,187,104,95,65,118,61,133,82,73,47,51,84,63,	0,17108,29113,30541,31358,32527,33108,33473,35429,39675,39964,41703,44573,44731,45098,48665,51802,53316,54313,60832,63823,68741,
#Partially deleted in new
chr4	145121009	145123690	chr4:145121009-145123690	0	+	145121009	145121009	8553170	5	224,59,111,143,213,	0,323,2011,2205,2468,
#Partially deleted in new
chr4	145121033	145123327	chr4:145121033-145123327	0	+	145121033	145121033	8553170	3	358,111,113,	0,1987,2181,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	145121319	145123931	chr4:145121319-145123931	0	+	145121319	145121319	8553170	2	1812,717,	0,1895,
#Partially deleted in new
chr4	145122868	145127643	chr4:145122868-145127643	0	+	145122868	145122868	8553170	5	263,143,123,112,118,	0,346,609,2121,4657,
#Partially deleted in new
chr4	145133648	145179680	chr4:145133648-145179680	1	-	145137429	145174708	789624	21	5002,41,261,139,81,56,124,163,187,104,95,65,118,61,133,82,73,47,51,84,102,	0,6302,7730,8547,9716,10297,10662,12618,16864,17153,18892,21762,21920,22287,25854,28991,30505,31502,38021,41012,45930,
#Partially deleted in new
chr4	145133689	145180161	chr4:145133689-145180161	3	-	145137429	145179973	789624	21	4961,41,261,139,81,56,124,163,187,104,95,65,118,61,133,82,73,47,51,84,347,	0,6261,7689,8506,9675,10256,10621,12577,16823,17112,18851,21721,21879,22246,25813,28950,30464,31461,37980,40971,46125,
#Partially deleted in new
chr4	145146093	145150895	chr4:145146093-145150895	0	-	145146093	145146093	8553170	3	336,187,94,	0,4419,4708,
#Partially deleted in new
chr4	145146373	145179680	chr4:145146373-145179680	0	-	145146373	145174708	789624	14	56,187,104,95,65,115,61,133,82,73,47,51,84,102,	0,4139,4428,6167,9037,9195,9562,13129,16266,17780,18777,25296,28287,33205,
#Partially deleted in new
chr4	145155812	145179928	chr4:145155812-145179928	0	-	145155812	145155812	8553170	9	26,61,133,82,73,47,51,84,114,	0,123,3690,6827,8341,9338,15857,18848,24002,
#Partially deleted in new
chr4	145159136	145178155	chr4:145159136-145178155	1	-	145159498	145174708	789624	7	499,82,73,47,51,84,28,	0,3503,5017,6014,12533,15524,18991,
#Partially deleted in new
chr4	145159519	145179611	chr4:145159519-145179611	0	-	145159519	145174708	789624	8	116,82,73,47,51,84,57,33,	0,3120,4634,5631,12150,15141,18994,20059,
#Partially deleted in new
chr4	145159519	145179633	chr4:145159519-145179633	0	-	145159519	145159519	8553170	7	116,82,73,6,51,84,55,	0,3120,4634,5672,12150,15141,20059,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	145170768	145171711	chr4:145170768-145171711	0	-	145170768	145170768	8553170	2	549,42,	0,901,
#Partially deleted in new
chr4	145269809	145270558	chr4:145269809-145270558	7	-	145269809	145269809	16724991	2	313,110,	0,639,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	145335262	145340421	chr4:145335262-145340421	3	-	145335262	145335262	789624	4	857,113,120,61,	0,1938,3702,5098,
#Deleted in new
chr4	145375542	145376253	chr4:145375542-145376253	7	+	145375542	145375542	16724991	1	711,	0,
#Deleted in new
chr4	145376908	145377957	chr4:145376908-145377957	3	+	145376908	145376908	8553170	1	1049,	0,
#Partially deleted in new
chr4	145456004	145456844	chr4:145456004-145456844	7	+	145456004	145456004	16724991	1	840,	0,
#Partially deleted in new
chr4	145481193	145514932	chr4:145481193-145514932	0	+	145514613	145514932	789624	2	121,495,	0,33244,
#Partially deleted in new
chr4	145481305	145514900	chr4:145481305-145514900	0	+	145514613	145514900	789624	2	95,463,	0,33132,
#Partially deleted in new
chr4	145481697	145514951	chr4:145481697-145514951	0	+	145514613	145514951	789624	2	55,514,	0,32740,
#Partially deleted in new
chr4	145481791	145558079	chr4:145481791-145558079	3	+	145514613	145557934	0	7	247,576,258,117,222,257,289,	0,32646,58012,60790,64911,71992,75999,
#Partially deleted in new
chr4	145481870	145515013	chr4:145481870-145515013	0	+	145514613	145515013	789624	3	168,103,576,	0,1203,32567,
#Partially deleted in new
chr4	145482485	145514788	chr4:145482485-145514788	0	+	145514613	145514788	789624	2	222,351,	0,31952,
#Partially deleted in new
chr4	145482497	145514746	chr4:145482497-145514746	0	+	145482497	145482497	8553170	2	323,309,	0,31940,
#Partially deleted in new
chr4	145482791	145514643	chr4:145482791-145514643	0	+	145514613	145514643	789624	3	77,138,206,	0,30449,31646,
#Partially deleted in new
chr4	145482804	145557954	chr4:145482804-145557954	1	+	145514613	145557934	0	7	64,576,258,117,222,257,164,	0,31633,56999,59777,63898,70979,74986,
#Partially deleted in new
chr4	145482810	145558079	chr4:145482810-145558079	1	+	145514613	145557934	0	7	366,576,258,117,222,257,289,	0,31627,56993,59771,63892,70973,74980,
#Partially deleted in new
chr4	145484512	145514703	chr4:145484512-145514703	0	+	145484512	145484512	8553170	2	252,266,	0,29925,
#Partially deleted in new
chr4	145497072	145502971	chr4:145497072-145502971	3	-	145497072	145497072	789624	2	994,96,	0,5803,
#Deleted in new
chr4	145514614	145517118	chr4:145514614-145517118	3	-	145514614	145514614	789624	2	376,105,	0,2399,
#Partially deleted in new
chr4	145525719	145539969	chr4:145525719-145539969	0	+	145525719	145525719	8553170	2	96,166,	0,14084,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	145544177	145558079	chr4:145544177-145558079	0	+	145544177	145544177	8553170	3	2747,257,289,	0,9606,13613,
#Partially deleted in new
chr4	145546076	145554035	chr4:145546076-145554035	0	+	145546076	145546076	8553170	3	95,222,252,	0,626,7707,
#Partially deleted in new
chr4	145546519	145553917	chr4:145546519-145553917	0	+	145546519	145546519	8553170	2	405,134,	0,7264,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	145599041	145600816	chr4:145599041-145600816	0	+	145599041	145599041	8553170	2	263,421,	0,1354,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	145599060	145655461	chr4:145599060-145655461	3	+	145639139	145655434	8553170	7	294,504,123,171,86,150,315,	0,40014,43302,46925,52001,54933,56086,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	145599082	145655456	chr4:145599082-145655456	1	+	145639139	145655434	8553170	7	222,504,123,171,20,150,310,	0,39992,43280,46903,52045,54911,56064,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	145599108	145600853	chr4:145599108-145600853	0	+	145599108	145599108	8553170	2	246,458,	0,1287,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	145618262	145660035	chr4:145618262-145660035	1	+	145639139	145655434	0	7	1145,504,123,171,86,150,4889,	0,20812,24100,27723,32799,35731,36884,
#Partially deleted in new
chr4	145618984	145646622	chr4:145618984-145646622	0	+	145618984	145618984	8553170	4	423,504,123,637,	0,20090,23378,27001,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	145619384	145660035	chr4:145619384-145660035	1	+	145639139	145655434	789624	7	23,504,123,171,86,150,4889,	0,19690,22978,26601,31677,34609,35762,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	145619503	145658424	chr4:145619503-145658424	1	+	145639139	145655434	8553170	7	146,504,123,171,86,150,3278,	0,19571,22859,26482,31558,34490,35643,
#Deleted in new
chr4	145624158	145626035	chr4:145624158-145626035	7	-	145624158	145624158	16724991	1	1877,	0,
#Partially deleted in new
chr4	145639079	145655444	chr4:145639079-145655444	0	+	145639139	145639643	8553170	6	787,123,171,86,150,298,	0,3283,6906,11982,14914,16067,
#Partially deleted in new
chr4	145639092	145655568	chr4:145639092-145655568	0	+	145639139	145654043	789624	5	486,123,171,150,422,	0,3270,6893,14901,16054,
#Partially deleted in new
chr4	145639092	145655568	chr4:145639092-145655568	1	+	145639139	145655453	789624	7	486,123,171,86,150,270,151,	0,3270,6893,11969,14901,16054,16325,
#Partially deleted in new
chr4	145642335	145650624	chr4:145642335-145650624	3	-	145642335	145642335	8553170	2	492,253,	0,8036,
#Partially deleted in new
chr4	145650918	145655494	chr4:145650918-145655494	0	+	145650918	145650918	8553170	3	229,150,348,	0,3075,4228,
#Partially deleted in new
chr4	145680114	145732794	chr4:145680114-145732794	3	+	145680203	145732560	789624	6	322,74,59,61,74,342,	0,16444,46796,49054,49777,52338,
#Partially deleted in new
chr4	145732452	145754351	chr4:145732452-145754351	0	+	145732452	145732452	8553170	2	167,145,	0,21754,
#Partially deleted in new
chr4	145732453	145771032	chr4:145732453-145771032	0	+	145732453	145732453	8553170	2	166,45,	0,38534,
#Partially deleted in new
chr4	145757626	145938635	chr4:145757626-145938635	1	-	145763106	145938407	789624	15	3972,33,178,192,167,172,138,104,58,240,234,481,173,1050,271,	0,5463,7361,7920,16879,18162,21747,65795,88329,91695,112618,128051,134616,144539,180738,
#Partially deleted in new
chr4	145760728	145938489	chr4:145760728-145938489	1	-	145763106	145938407	789624	14	870,33,178,192,167,172,138,104,58,240,234,481,173,125,	0,2361,4259,4818,13777,15060,18645,62693,85227,88593,109516,124949,131514,177636,
#Partially deleted in new
chr4	145760737	145938471	chr4:145760737-145938471	3	-	145764983	145938407	789624	15	861,33,187,192,167,172,138,104,58,240,234,481,173,1050,107,	0,2352,4241,4809,13768,15051,18636,62684,85218,88584,109507,124940,131505,141428,177627,
#Deleted in new
chr4	145761128	145765055	chr4:145761128-145765055	0	-	145761128	145765055	789624	2	470,68,	0,3859,
#Partially deleted in new
chr4	145761281	145774667	chr4:145761281-145774667	0	-	145764983	145774667	789624	4	317,187,192,162,	0,3697,4265,13224,
#Partially deleted in new
chr4	145764688	145774562	chr4:145764688-145774562	0	-	145764688	145764688	8553170	3	477,192,57,	0,858,9817,
#Partially deleted in new
chr4	145819837	145845992	chr4:145819837-145845992	0	-	145819837	145819837	8553170	3	259,104,37,	0,3584,26118,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	145830455	145832980	chr4:145830455-145832980	3	-	145830455	145830455	8553170	1	2525,	0,
#Partially deleted in new
chr4	145849350	145870767	chr4:145849350-145870767	0	-	145849350	145849350	8553170	3	211,234,49,	0,20894,21368,
#Partially deleted in new
chr4	145870300	145892415	chr4:145870300-145892415	0	-	145870300	145870300	8553170	3	178,126,173,	0,15732,21942,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	145876495	145885748	chr4:145876495-145885748	0	-	145876495	145876495	8553170	2	363,71,	0,9182,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	146052603	146056762	chr4:146052603-146056762	3	-	146052603	146052603	8553170	1	4159,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	146077845	146108157	chr4:146077845-146108157	3	-	146077845	146077845	8553170	3	302,164,56,	0,15959,30256,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	146109454	146121906	chr4:146109454-146121906	1	-	146109454	146109454	789624	6	412,163,150,115,174,161,	0,1856,2146,4187,4837,12291,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	146109456	146121913	chr4:146109456-146121913	3	-	146109456	146109456	8553170	5	410,163,150,824,168,	0,1854,2144,4185,12289,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	146110822	146111717	chr4:146110822-146111717	0	-	146110822	146110822	8553170	3	171,163,117,	0,488,778,
#Deleted in new
chr4	146111158	146111705	chr4:146111158-146111705	0	-	146111158	146111158	8553170	2	315,105,	0,442,
#Deleted in new
chr4	146111429	146112210	chr4:146111429-146112210	0	-	146111429	146111429	8553170	3	44,150,217,	0,171,564,
#Partially deleted in new
chr4	146175684	146191535	chr4:146175684-146191535	3	+	146182921	146189656	0	4	127,104,114,1914,	0,7227,11589,13937,
#Partially deleted in new
chr4	146175702	146200000	chr4:146175702-146200000	0	+	146182921	146189656	0	5	109,104,114,160,58,	0,7209,11571,13919,24240,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	146175726	146183646	chr4:146175726-146183646	0	+	146175726	146175726	8553170	2	85,735,	0,7185,
#Partially deleted in new
chr4	146175727	146189767	chr4:146175727-146189767	1	+	146182921	146189656	8553170	4	84,110,114,146,	0,7178,11546,13894,
#Partially deleted in new
chr4	146175728	146190046	chr4:146175728-146190046	1	+	146182921	146189656	0	4	709,104,114,425,	0,7183,11545,13893,
#Partially deleted in new
chr4	146175747	146190187	chr4:146175747-146190187	0	+	146182921	146189656	0	5	64,104,114,160,107,	0,7164,11526,13874,14333,
#Deleted in new
chr4	146175769	146176686	chr4:146175769-146176686	0	+	146175769	146175769	8553170	2	42,519,	0,398,
#Deleted in new
chr4	146180850	146181316	chr4:146180850-146181316	3	+	146180850	146180850	8553170	1	466,	0,
#Partially deleted in new
chr4	146182922	146187551	chr4:146182922-146187551	0	+	146182922	146182922	8553170	2	93,278,	0,4351,
#Partially deleted in new
chr4	146214514	146230878	chr4:146214514-146230878	3	+	146216952	146230513	789624	7	180,209,223,164,313,64,974,	0,2437,7842,9930,13695,14510,15390,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	146214537	146230836	chr4:146214537-146230836	0	+	146214620	146215112	789624	8	157,123,219,223,164,313,64,932,	0,538,2404,7819,9907,13672,14487,15367,
#Partially deleted in new
chr4	146224556	146229056	chr4:146224556-146229056	0	+	146224556	146224556	8553170	3	52,313,32,	0,3653,4468,
#Deleted in new
chr4	146231891	146232267	chr4:146231891-146232267	3	+	146231891	146231891	8553170	1	376,	0,
#Partially deleted in new
chr4	146241805	146243669	chr4:146241805-146243669	3	+	146241805	146241805	8553170	2	248,484,	0,1380,
#Partially deleted in new
chr4	146253974	146521964	chr4:146253974-146521964	1	-	146256490	146521717	789624	11	2546,146,74,52,166,84,36,76,137,83,347,	0,4717,29217,38954,39955,51951,71986,249874,255938,263063,267643,
#Partially deleted in new
chr4	146254931	146521933	chr4:146254931-146521933	3	-	146256490	146521717	789624	12	1589,146,74,52,166,84,36,39,76,137,83,316,	0,3760,28260,37997,38998,50994,71029,187851,248917,254981,262106,266686,
#Partially deleted in new
chr4	146256490	146521717	chr4:146256490-146521717	1	-	146256852	146521717	789624	13	30,111,146,74,52,166,84,36,39,76,137,83,100,	0,335,2201,26701,36438,37439,49435,69470,186292,247358,253422,260547,265127,
#Partially deleted in new
chr4	146325960	146521873	chr4:146325960-146521873	0	-	146325960	146325960	8553170	4	36,39,83,256,	0,116822,191077,195657,
#Partially deleted in new
chr4	146408582	146408688	chr4:146408582-146408688	3	+	146408582	146408582	5263520	1	106,	0,
#Partially deleted in new
chr4	146441665	146521895	chr4:146441665-146521895	1	-	146442737	146521717	789624	5	1156,76,137,83,278,	0,62183,68247,75372,79952,
#Partially deleted in new
chr4	146442317	146521830	chr4:146442317-146521830	0	-	146442317	146442317	8553170	5	504,76,137,83,213,	0,61531,67595,74720,79300,
#Partially deleted in new
chr4	146442324	146521830	chr4:146442324-146521830	1	-	146503849	146521717	789624	4	497,76,83,213,	0,61524,74713,79293,
#Partially deleted in new
chr4	146477878	146503903	chr4:146477878-146503903	0	-	146477878	146477878	8553170	2	423,55,	0,25970,
#Partially deleted in new
chr4	146513901	146521922	chr4:146513901-146521922	1	-	146515139	146521717	789624	3	1250,83,305,	0,3136,7716,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	146580047	146580210	chr4:146580047-146580210	3	+	146580047	146580047	8553170	1	163,	0,
#Partially deleted in new
chr4	146638892	146642474	chr4:146638892-146642474	3	+	146639140	146640808	789624	2	536,2608,	0,974,
#Partially deleted in new
chr4	146706637	146945832	chr4:146706637-146945832	1	-	146707157	146942655	789624	14	551,67,229,124,92,86,213,186,224,84,98,101,47,124,	0,847,96819,113487,127168,160860,168078,196906,202388,230956,233166,235946,238393,239071,
#Partially deleted in new
chr4	146707027	146945882	chr4:146707027-146945882	3	-	146707157	146939895	789624	13	161,67,229,124,92,86,213,186,224,84,98,47,174,	0,457,96429,113097,126778,160470,167688,196516,201998,230566,232776,238003,238681,
#Partially deleted in new
chr4	146707028	146945828	chr4:146707028-146945828	1	-	146833821	146939895	789624	14	160,67,229,124,73,18,86,213,186,224,84,98,47,120,	0,456,96428,113096,126777,126851,160469,167687,196515,201997,230565,232775,238002,238680,
#Partially deleted in new
chr4	146707031	146945833	chr4:146707031-146945833	0	-	146831679	146939895	789624	14	157,67,229,124,154,92,86,213,186,224,84,98,47,125,	0,453,96425,113093,124609,126774,160466,167684,196512,201994,230562,232772,237999,238677,
#Partially deleted in new
chr4	146707032	146945882	chr4:146707032-146945882	1	-	146707157	146939895	789624	13	156,64,229,124,92,86,213,186,224,84,98,47,174,	0,452,96424,113092,126773,160465,167683,196511,201993,230561,232771,237998,238676,
#Partially deleted in new
chr4	146707168	146764187	chr4:146707168-146764187	0	-	146707168	146707168	8553170	3	20,67,374,	0,316,56645,
#Partially deleted in new
chr4	146803475	146813030	chr4:146803475-146813030	0	-	146803475	146803475	8553170	2	210,274,	0,9281,
#Partially deleted in new
chr4	146909222	146945048	chr4:146909222-146945048	0	-	146909222	146942655	789624	6	27,84,98,101,237,18,	0,28371,30581,33361,34874,35808,
#Partially deleted in new
chr4	146934000	146945471	chr4:146934000-146945471	3	+	146934000	146934000	8553170	3	337,146,41,	0,8845,11430,
#Partially deleted in new
chr4	146939816	146945879	chr4:146939816-146945879	0	-	146939816	146939895	789624	4	85,254,47,171,	0,4280,5214,5892,
#Partially deleted in new
chr4	146957437	146975314	chr4:146957437-146975314	3	+	146957437	146957437	8553170	4	49,131,103,160,	0,2007,4805,17717,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	146973857	146975457	chr4:146973857-146975457	1	+	146973857	146973857	8553170	2	131,387,	0,1213,
#Deleted in new
chr4	147005491	147009145	chr4:147005491-147009145	3	+	147005491	147005491	8553170	1	3654,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	147025913	147030072	chr4:147025913-147030072	3	+	147025913	147025913	8553170	1	4159,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	147344628	147344717	chr4:147344628-147344717	3	-	147344628	147344628	5263520	1	89,	0,
#Partially deleted in new
chr4	147425973	147426351	chr4:147425973-147426351	7	-	147425973	147425973	16724991	1	378,	0,
#Deleted in new
chr4	147458723	147459321	chr4:147458723-147459321	7	-	147458723	147458723	16724991	1	598,	0,
#Partially deleted in new
chr4	147480916	147544954	chr4:147480916-147544954	3	+	147485681	147542618	789624	8	460,490,128,199,153,134,109,2477,	0,4695,38934,51589,54960,58900,59460,61561,
#Partially deleted in new
chr4	147480916	147544954	chr4:147480916-147544954	1	+	147485681	147542618	789624	6	460,490,153,134,109,2477,	0,4695,54960,58900,59460,61561,
#Partially deleted in new
chr4	147480931	147542878	chr4:147480931-147542878	1	+	147532632	147542618	789624	7	445,128,199,153,134,109,401,	0,38919,51574,54945,58885,59445,61546,
#Partially deleted in new
chr4	147480931	147544954	chr4:147480931-147544954	1	+	147532632	147542618	8553170	8	445,490,128,199,153,134,109,2477,	0,4680,38919,51574,54945,58885,59445,61546,
#Partially deleted in new
chr4	147485681	147542693	chr4:147485681-147542693	1	+	147485681	147542618	789624	5	420,153,134,109,216,	0,50195,54135,54695,56796,
#Partially deleted in new
chr4	147485681	147542693	chr4:147485681-147542693	0	+	147485681	147535892	789624	6	420,128,153,134,109,216,	0,34169,50195,54135,54695,56796,
#Partially deleted in new
chr4	147485833	147532659	chr4:147485833-147532659	0	+	147485833	147485833	8553170	2	268,154,	0,46672,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	147487970	147496062	chr4:147487970-147496062	3	+	147487970	147487970	8553170	1	8092,	0,
#Partially deleted in new
chr4	147506090	147506765	chr4:147506090-147506765	7	+	147506090	147506090	16724991	1	675,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	147531642	147543980	chr4:147531642-147543980	0	+	147531642	147531642	8553170	6	88,199,153,134,109,1503,	0,863,4234,8174,8734,10835,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	147609551	147617245	chr4:147609551-147617245	3	-	147609551	147609551	8553170	2	410,158,	0,7536,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	147617382	147636721	chr4:147617382-147636721	3	+	147617956	147634434	789624	10	697,131,37,206,75,94,113,100,172,2553,	0,6451,6679,7421,10978,12216,14010,15520,16382,16786,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	147617385	147672044	chr4:147617385-147672044	1	+	147617956	147671873	789624	8	694,131,37,206,75,94,113,178,	0,6448,6676,7418,10975,12213,14007,54481,
#Partially deleted in new
chr4	147629611	147634528	chr4:147629611-147634528	0	+	147629611	147632979	789624	5	81,113,48,172,360,	0,1781,3343,4153,4557,
#Partially deleted in new
chr4	147632546	147634178	chr4:147632546-147634178	0	+	147632546	147632546	8553170	3	456,172,10,	0,1218,1622,
#Partially deleted in new
chr4	147637784	147684230	chr4:147637784-147684230	3	-	147638531	147683987	789624	12	963,123,154,715,184,193,107,103,168,237,149,432,	0,1175,5002,16067,20007,23061,30754,32856,35174,35853,42538,46014,
#Partially deleted in new
chr4	147638384	147661318	chr4:147638384-147661318	0	-	147638384	147638384	8553170	6	363,123,154,715,184,473,	0,575,4402,15467,19407,22461,
#Partially deleted in new
chr4	147638384	147684125	chr4:147638384-147684125	0	-	147673862	147683987	789624	11	363,123,154,715,184,193,107,103,168,237,327,	0,575,4402,15467,19407,22461,30154,32256,34574,35253,45414,
#Deleted in new
chr4	147638680	147639293	chr4:147638680-147639293	0	-	147638680	147638680	8553170	2	67,334,	0,279,
#Partially deleted in new
chr4	147732062	148072780	chr4:147732062-148072780	3	+	147732301	148072081	0	23	393,96,62,72,102,111,105,130,107,95,82,46,66,75,88,59,106,160,151,160,153,92,788,	0,90664,90833,115088,125490,132783,134649,142958,147169,149775,174575,177669,181011,207762,214554,223253,232961,234617,291200,314829,331085,332353,339930,
#Partially deleted in new
chr4	147732062	147858488	chr4:147732062-147858488	0	+	147732062	147732062	8553170	5	393,96,62,72,936,	0,90664,90833,115088,125490,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	147745302	147745417	chr4:147745302-147745417	7	-	147745302	147745302	16724991	1	115,	0,
#Deleted in new
chr4	147782594	147782668	chr4:147782594-147782668	3	+	147782594	147782594	5263520	1	74,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	147808925	147809209	chr4:147808925-147809209	3	+	147808925	147808925	8553170	1	284,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr4	147860982	148072776	chr4:147860982-148072776	0	+	147860982	147860982	8553170	17	5834,130,107,95,82,46,66,75,88,59,106,160,151,160,153,92,784,	0,14038,18249,20855,45655,48749,52091,78842,85634,94333,104041,105697,162280,185909,202165,203433,211010,
#Partially deleted in new
chr4	147881866	148072775	chr4:147881866-148072775	0	+	147881866	148072081	789624	13	66,82,46,66,75,88,59,106,160,151,160,92,783,	0,24771,27865,31207,57958,64750,73449,83157,84813,141396,165025,182549,190126,
#Deleted in new
chr4	147916528	147917386	chr4:147916528-147917386	7	-	147916528	147916528	16724991	1	858,	0,
#Partially deleted in new
chr4	147946238	148072776	chr4:147946238-148072776	0	+	147946238	147946238	8553170	9	466,59,106,160,151,160,153,92,784,	0,9077,18785,20441,77024,100653,116909,118177,125754,
#Partially deleted in new
chr4	148023053	148063277	chr4:148023053-148063277	0	+	148023053	148023053	8553170	3	360,160,125,	0,23838,40099,
#Partially deleted in new
chr4	148065239	148072376	chr4:148065239-148072376	0	+	148065239	148065239	8553170	3	421,187,19,	0,6753,7118,
#Partially deleted in new
chr4	148078761	148444698	chr4:148078761-148444698	3	-	148081343	148436860	789624	9	2738,158,131,145,351,117,140,1759,173,	0,35342,41396,73707,75789,115984,181216,356342,365764,
#Partially deleted in new
chr4	148078764	148442520	chr4:148078764-148442520	1	-	148081343	148436860	789624	9	2735,158,131,145,351,117,152,1759,361,	0,35339,41393,73704,75786,115981,181201,356339,363395,
#Partially deleted in new
chr4	148078768	148442520	chr4:148078768-148442520	1	-	148081343	148436860	789624	9	2731,158,131,145,351,117,140,1759,361,	0,35335,41389,73700,75782,115977,181209,356335,363391,
#Partially deleted in new
chr4	148080192	148442224	chr4:148080192-148442224	1	-	148081343	148436860	789624	8	1307,158,131,145,117,140,1759,65,	0,33911,39965,72276,114553,179785,354911,361967,
#Partially deleted in new
chr4	148080866	148442371	chr4:148080866-148442371	0	-	148120181	148436860	789624	7	633,158,131,117,140,1759,212,	0,33237,39291,113879,179111,354237,361293,
#Partially deleted in new
chr4	148081343	148436860	chr4:148081343-148436860	1	-	148081343	148436860	789624	8	156,158,131,145,351,117,152,1757,	0,32760,38814,71125,73207,113402,178622,353760,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	148146470	148208880	chr4:148146470-148208880	3	+	148146470	148146470	8553170	3	79,271,330,	0,61521,62080,
#Partially deleted in new
chr4	148146587	148201132	chr4:148146587-148201132	0	-	148146587	148146587	8553170	5	170,145,351,117,94,	0,5881,7963,48158,54451,
#Partially deleted in new
chr4	148152416	148154844	chr4:148152416-148154844	0	-	148152416	148152416	8553170	2	197,294,	0,2134,
#Partially deleted in new
chr4	148194770	148368470	chr4:148194770-148368470	0	-	148194770	148194770	8553170	3	92,140,206,	0,65207,173494,
#Deleted in new
chr4	148526492	148527139	chr4:148526492-148527139	7	-	148526492	148526492	16724991	1	647,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	148557946	148558048	chr4:148557946-148558048	7	+	148557946	148557946	16724991	1	102,	0,
#Deleted in new
chr4	148693031	148694323	chr4:148693031-148694323	3	+	148693031	148693031	8553170	2	226,292,	0,1000,
#Deleted in new
chr4	148703525	148703832	chr4:148703525-148703832	7	-	148703525	148703525	16724991	1	307,	0,
#Deleted in new
chr4	148819350	148819956	chr4:148819350-148819956	3	-	148819350	148819350	8553170	1	606,	0,
#Deleted in new
chr4	148940940	148942378	chr4:148940940-148942378	3	-	148940940	148940940	789624	3	147,186,37,	0,716,1401,
#Deleted in new
chr4	148940948	148941777	chr4:148940948-148941777	0	-	148940948	148940948	8553170	2	139,230,	0,599,
#Partially deleted in new
chr4	148991571	148991633	chr4:148991571-148991633	3	-	148991571	148991571	8553170	1	62,	0,
#Partially deleted in new
chr4	149027444	149062522	chr4:149027444-149062522	3	-	149027444	149027444	8553170	4	101,219,48,113,	0,3647,21306,34965,
#Deleted in new
chr4	149147801	149149780	chr4:149147801-149149780	3	-	149147801	149147801	8553170	2	244,232,	0,1747,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	149154294	149278123	chr4:149154294-149278123	3	+	149154294	149154294	789624	13	325,274,194,260,308,88,237,175,56,92,166,86,259,	0,1157,48068,49598,50612,60149,60356,62108,63670,101709,101938,105682,123570,
#Partially deleted in new
chr4	149351902	149815859	chr4:149351902-149815859	3	-	149351950	149742691	789624	14	164,162,135,145,199,68,116,89,91,265,83,85,38,260,	0,81493,196552,201240,211789,236027,269226,330215,334475,381341,383473,390752,463408,463697,
#Partially deleted in new
chr4	149429921	149815859	chr4:149429921-149815859	1	-	149429973	149742691	789624	14	108,162,135,145,199,68,116,89,91,265,83,85,38,260,	0,3474,118533,123221,133770,158008,191207,252196,256456,303322,305454,312733,385389,385678,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr4	149429931	149815828	chr4:149429931-149815828	0	-	149691783	149742691	789624	17	98,162,218,135,145,199,68,116,89,91,54,265,83,85,63,38,229,	0,3464,84593,118523,123211,133760,157998,191197,252186,256446,261806,303312,305444,312723,318761,385379,385668,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	149666056	149711149	chr4:149666056-149711149	3	+	149666056	149666056	8553170	3	143,169,198,	0,24766,44895,
#Partially deleted in new
chr4	149733340	149815814	chr4:149733340-149815814	0	-	149733340	149733340	8553170	5	168,83,57,38,215,	0,2035,60319,81970,82259,
#Partially deleted in new
chr4	149737613	149815814	chr4:149737613-149815814	0	-	149737613	149737613	8553170	5	98,85,63,38,215,	0,5041,11079,77697,77986,
#Deleted in new
chr4	149789951	149790303	chr4:149789951-149790303	7	+	149789951	149789951	16724991	1	352,	0,
#Deleted in new
chr4	149907559	149907675	chr4:149907559-149907675	7	+	149907559	149907559	16724991	1	116,	0,
#Deleted in new
chr4	149956207	149958572	chr4:149956207-149958572	3	+	149956207	149956207	8553170	2	66,292,	0,2073,
#Partially deleted in new
chr4	150078273	150257457	chr4:150078273-150257457	3	+	150079027	150256247	789624	16	1175,335,103,102,95,76,109,58,120,147,134,78,97,81,117,1438,	0,24204,114864,119728,125521,142429,143403,146227,154063,154408,161468,162125,169329,170031,171294,177746,
#Partially deleted in new
chr4	150078988	150257438	chr4:150078988-150257438	0	+	150079027	150253491	789624	17	460,335,103,102,95,73,109,58,120,147,134,78,97,81,117,83,1419,	0,23489,114149,119013,124806,141717,142688,145512,153348,153693,160753,161410,168614,169316,170579,174485,177031,
#Partially deleted in new
chr4	150079025	150256036	chr4:150079025-150256036	1	+	150079027	150256036	789624	18	423,335,103,102,51,95,73,109,58,120,147,134,78,97,81,117,13,17,	0,23452,114112,118976,120002,124769,141680,142651,145475,153311,153656,160716,161373,168577,169279,170542,175400,176994,
#Partially deleted in new
chr4	150079027	150257438	chr4:150079027-150257438	1	+	150079027	150256247	789624	17	421,335,103,102,51,95,76,109,58,120,147,134,78,97,81,117,1419,	0,23450,114110,118974,120000,124767,141675,142649,145473,153309,153654,160714,161371,168575,169277,170540,176992,
#Partially deleted in new
chr4	150079027	150256247	chr4:150079027-150256247	1	+	150079027	150256247	789624	16	421,335,103,102,95,73,109,58,120,147,134,78,97,81,117,228,	0,23450,114110,118974,124767,141678,142649,145473,153309,153654,160714,161371,168575,169277,170540,176992,
#Partially deleted in new
chr4	150175442	150198103	chr4:150175442-150198103	0	+	150175442	150175442	8553170	3	194,103,102,	0,17695,22559,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	150209705	150209768	chr4:150209705-150209768	3	+	150209705	150209705	8553170	1	63,	0,
#Partially deleted in new
chr4	150240471	150256119	chr4:150240471-150256119	0	+	150240471	150253491	789624	5	5,97,117,83,100,	0,7131,9096,13002,15548,
#Partially deleted in new
chr4	150264530	151015267	chr4:150264530-151015267	1	-	150265721	151014642	0	57	1282,152,197,102,165,156,63,178,90,168,153,120,141,113,116,103,118,137,147,125,167,109,65,62,134,79,134,442,160,108,122,181,154,179,1059,193,124,82,109,93,98,63,80,169,153,109,134,198,147,120,127,122,96,101,232,435,66,	0,13322,17919,21402,38097,45698,51030,56660,61278,85461,150907,171058,172193,203142,207093,223201,226387,323517,326182,334476,419020,470727,497252,533550,541740,543789,552593,563649,567286,579569,580127,584287,584891,586193,587354,603140,603651,605994,606814,608132,628521,631863,633208,635518,641307,641766,643803,644129,649664,651077,651870,652086,656667,663985,664303,749896,750671,
#Partially deleted in new
chr4	150264658	151015727	chr4:150264658-151015727	3	-	150265721	151014642	0	58	1154,152,197,102,168,156,63,178,90,168,153,120,141,113,116,103,118,137,147,33,125,167,109,65,62,134,79,134,442,160,108,122,181,154,179,1059,193,124,82,109,93,98,63,80,169,153,109,134,198,147,120,127,122,96,101,232,435,255,	0,13194,17791,21274,37966,45570,50902,56532,61150,85333,150779,170930,172065,203014,206965,223073,226259,323389,326054,332424,334348,418892,470599,497124,533422,541612,543661,552465,563521,567158,579441,579999,584159,584763,586065,587226,603012,603523,605866,606686,608004,628393,631735,633080,635390,641179,641638,643675,644001,649536,650949,651742,651958,656539,663857,664175,749768,750814,
#Partially deleted in new
chr4	150264658	150581722	chr4:150264658-150581722	0	-	150264658	150264658	8553170	18	1154,152,197,102,168,156,63,193,90,168,153,120,141,113,116,103,118,405,	0,13194,17791,21274,37966,45570,50902,56532,61150,85333,150779,170930,172065,203014,206965,223073,226259,316659,
#Partially deleted in new
chr4	150264658	150311369	chr4:150264658-150311369	0	-	150264658	150264658	8553170	6	1154,152,197,102,168,1141,	0,13194,17791,21274,37966,45570,
#Partially deleted in new
chr4	150264660	150849537	chr4:150264660-150849537	0	-	150265721	150849537	789624	33	1152,152,197,102,168,156,63,178,90,168,153,120,141,113,116,103,118,137,147,125,167,109,65,62,134,79,134,442,160,108,122,181,116,	0,13192,17789,21272,37964,45568,50900,56530,61148,85331,150777,170928,172063,203012,206963,223071,226257,323387,326052,334346,418890,470597,497122,533420,541610,543659,552463,563519,567156,579439,579997,584157,584761,
#Partially deleted in new
chr4	150264664	150487803	chr4:150264664-150487803	0	-	150353912	150487803	8553170	17	1148,152,197,102,168,156,63,193,90,168,194,153,120,141,113,116,72,	0,13188,17785,21268,37960,45564,50896,56526,61144,85327,89066,150773,170924,172059,203008,206959,223067,
#Partially deleted in new
chr4	150264667	150583996	chr4:150264667-150583996	0	-	150264667	150264667	8553170	12	1145,152,197,102,168,156,63,193,90,168,153,1491,	0,13185,17782,21265,37957,45561,50893,56523,61141,85324,150770,317838,
#Partially deleted in new
chr4	150264696	150487760	chr4:150264696-150487760	0	-	150265755	150487760	8553170	17	1116,43,152,197,102,168,156,63,193,90,168,153,120,141,113,116,29,	0,1702,13156,17753,21236,37928,45532,50864,56494,61112,85295,150741,170892,172027,202976,206927,223035,
#Partially deleted in new
chr4	150265025	150315634	chr4:150265025-150315634	0	-	150265025	150265025	8553170	7	787,152,197,102,168,156,74,	0,12827,17424,20907,37599,45203,50535,
#Partially deleted in new
chr4	150265565	150302711	chr4:150265565-150302711	0	-	150265755	150302711	789624	4	247,197,102,87,	0,16884,20367,37059,
#Partially deleted in new
chr4	150314722	151015277	chr4:150314722-151015277	1	-	150315525	151014642	789624	51	901,178,90,168,153,120,141,113,116,103,118,137,147,125,167,109,65,62,134,79,134,442,160,108,122,181,154,179,1059,193,124,82,109,93,98,63,80,169,153,109,134,198,147,120,127,122,96,101,232,435,76,	0,6468,11086,35269,100715,120866,122001,152950,156901,173009,176195,273325,275990,284284,368828,420535,447060,483358,491548,493597,502401,513457,517094,529377,529935,534095,534699,536001,537162,552948,553459,555802,556622,557940,578329,581671,583016,585326,591115,591574,593611,593937,599472,600885,601678,601894,606475,613793,614111,699704,700479,
#Partially deleted in new
chr4	150315610	150436768	chr4:150315610-150436768	0	-	150315610	150436768	8553170	7	13,193,90,99,153,120,45,	0,5580,10198,34381,99827,119978,121113,
#Deleted in new
chr4	150422644	150423642	chr4:150422644-150423642	7	-	150422644	150422644	16724991	1	998,	0,
#Partially deleted in new
chr4	150490956	150679667	chr4:150490956-150679667	0	-	150490956	150490956	8553170	5	79,137,147,125,80,	0,97091,99756,108050,188631,
#Deleted in new
chr4	150579088	150581545	chr4:150579088-150581545	3	+	150579088	150579088	8553170	2	267,1942,	0,515,
#Deleted in new
chr4	150581921	150584693	chr4:150581921-150584693	3	+	150583029	150584109	789624	1	2772,	0,
#Deleted in new
chr4	150683602	150683963	chr4:150683602-150683963	0	-	150683602	150683602	8553170	2	115,119,	0,242,
#Deleted in new
chr4	150720980	150721478	chr4:150720980-150721478	7	+	150720980	150720980	16724991	1	498,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	150840539	150848887	chr4:150840539-150848887	0	-	150840948	150848887	789624	4	514,108,122,70,	0,3560,4118,8278,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	150970670	150970782	chr4:150970670-150970782	7	-	150970670	150970670	16724991	1	112,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	151012804	151015284	chr4:151012804-151015284	0	-	151012804	151012804	8553170	2	2057,83,	0,2397,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	151012828	151015727	chr4:151012828-151015727	0	-	151012828	151012828	8553170	2	2033,255,	0,2644,
#Deleted in new
chr4	151027089	151027617	chr4:151027089-151027617	7	+	151027089	151027089	16724991	1	528,	0,
#Partially deleted in new
chr4	151099572	151104652	chr4:151099572-151104652	3	+	151099652	151104593	0	6	142,104,188,209,110,181,	0,912,1402,3298,4604,4899,
#Partially deleted in new
chr4	151099623	151104637	chr4:151099623-151104637	1	+	151102873	151104593	789624	4	91,209,110,166,	0,3247,4553,4848,
#Partially deleted in new
chr4	151099627	151102932	chr4:151099627-151102932	0	+	151100533	151102932	789624	4	260,104,188,62,	0,857,1347,3243,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	151099627	151104205	chr4:151099627-151104205	0	+	151099627	151099627	8553170	3	87,104,1335,	0,857,3243,
#Partially deleted in new
chr4	151099628	151104637	chr4:151099628-151104637	1	+	151100533	151104593	789624	6	208,104,188,209,110,166,	0,856,1346,3242,4548,4843,
#Partially deleted in new
chr4	151099628	151104238	chr4:151099628-151104238	0	+	151099652	151102881	789624	5	86,104,111,209,62,	0,856,1346,3242,4548,
#Partially deleted in new
chr4	151099630	151101114	chr4:151099630-151101114	0	+	151100533	151101114	789624	3	236,104,140,	0,854,1344,
#Partially deleted in new
chr4	151099638	151104637	chr4:151099638-151104637	1	+	151099652	151104239	789624	6	76,104,188,209,102,166,	0,846,1336,3232,4546,4833,
#Partially deleted in new
chr4	151099639	151103004	chr4:151099639-151103004	0	+	151100533	151103004	789624	4	161,104,188,134,	0,845,1335,3231,
#Partially deleted in new
chr4	151099667	151104537	chr4:151099667-151104537	0	+	151099667	151104239	789624	6	47,104,188,171,110,66,	0,817,1307,3203,4509,4804,
#Partially deleted in new
chr4	151099668	151104490	chr4:151099668-151104490	0	+	151100533	151104490	789624	6	44,104,188,209,110,19,	0,816,1306,3202,4508,4803,
#Partially deleted in new
chr4	151099670	151104637	chr4:151099670-151104637	0	+	151099670	151104593	789624	6	44,104,38,209,110,166,	0,814,1304,3200,4506,4801,
#Partially deleted in new
chr4	151099673	151104623	chr4:151099673-151104623	1	+	151100533	151104593	789624	6	41,162,188,209,110,152,	0,753,1301,3197,4503,4798,
#Partially deleted in new
chr4	151099872	151104528	chr4:151099872-151104528	0	+	151099964	151104528	789624	6	94,104,188,209,110,57,	0,612,1102,2998,4304,4599,
#Partially deleted in new
chr4	151102056	151102128	chr4:151102056-151102128	3	+	151102056	151102056	789624	1	72,	0,
#Partially deleted in new
chr4	151102750	151120811	chr4:151102750-151120811	0	-	151102750	151102750	8553170	2	382,121,	0,17940,
#Deleted in new
chr4	151103826	151103891	chr4:151103826-151103891	3	+	151103826	151103826	789624	1	65,	0,
#Partially deleted in new
chr4	151120278	151226598	chr4:151120278-151226598	1	-	151122090	151175363	789624	20	1929,98,187,53,203,59,131,73,141,265,62,113,108,1005,163,139,43,41,40,431,	0,7339,7891,12052,12755,14795,17453,19496,23631,27643,29221,38961,45310,54391,56246,56538,59076,67144,105768,105889,
#Partially deleted in new
chr4	151120280	151226508	chr4:151120280-151226508	3	-	151122090	151175363	789624	21	1927,98,187,53,203,59,131,73,141,69,265,62,113,108,1026,154,139,43,41,40,341,	0,7337,7889,12050,12753,14793,17451,19494,23629,23939,27641,29219,38959,45308,54389,56253,56536,59074,67142,105766,105887,
#Partially deleted in new
chr4	151120283	151226066	chr4:151120283-151226066	1	-	151122090	151175363	789624	20	1924,98,187,53,203,59,131,73,141,69,265,62,113,108,1005,154,139,43,41,20,	0,7334,7886,12047,12750,14790,17448,19491,23626,23936,27638,29216,38956,45305,54386,56250,56533,59071,67139,105763,
#Partially deleted in new
chr4	151120286	151166320	chr4:151120286-151166320	0	-	151120286	151120286	8553170	13	1921,98,187,53,203,59,131,73,141,265,62,113,732,	0,7331,7883,12044,12747,14787,17445,19488,23623,27635,29213,38953,45302,
#Partially deleted in new
chr4	151120286	151228030	chr4:151120286-151228030	1	-	151122090	151175363	789624	20	1921,98,187,53,203,59,131,73,141,265,62,113,108,1005,154,139,43,41,40,271,	0,7331,7883,12044,12747,14787,17445,19488,23623,27635,29213,38953,45302,54383,56247,56530,59068,67136,105760,107473,
#Partially deleted in new
chr4	151120286	151325632	chr4:151120286-151325632	1	-	151122090	151325352	789624	20	1921,98,187,53,203,59,131,73,141,265,62,113,108,1005,154,139,43,41,40,392,	0,7331,7883,12044,12747,14787,17445,19488,23623,27635,29213,38953,45302,54383,56247,56530,59068,67136,105760,204954,
#Partially deleted in new
chr4	151121819	151175552	chr4:151121819-151175552	1	-	151122090	151175363	789624	13	388,98,187,53,203,59,131,73,141,265,62,113,883,	0,5798,6350,10511,11214,13254,15912,17955,22090,26102,27680,37420,52850,
#Partially deleted in new
chr4	151137732	151144404	chr4:151137732-151144404	0	-	151137732	151137732	8553170	3	130,73,495,	0,2042,6177,
#Deleted in new
chr4	151139990	151141103	chr4:151139990-151141103	3	+	151139990	151139990	8553170	1	1113,	0,
#Deleted in new
chr4	151170532	151175292	chr4:151170532-151175292	0	-	151170714	151175292	789624	2	259,623,	0,4137,
#Partially deleted in new
chr4	151176556	151266246	chr4:151176556-151266246	0	-	151176556	151176556	8553170	6	131,139,43,41,40,161,	0,260,2798,10866,49490,89529,
#Partially deleted in new
chr4	151176618	151226453	chr4:151176618-151226453	0	-	151176618	151176618	8553170	7	69,139,43,41,41,40,286,	0,198,2736,5070,10804,49428,49549,
#Partially deleted in new
chr4	151176624	151227917	chr4:151176624-151227917	0	-	151176624	151176624	8553170	7	63,139,43,41,40,73,158,	0,192,2730,10798,49422,49543,51135,
#Partially deleted in new
chr4	151259502	151262849	chr4:151259502-151262849	7	+	151259502	151259502	16724991	5	129,24,181,30,122,	0,1609,1841,2834,3225,
#Partially deleted in new
chr4	151277170	151291453	chr4:151277170-151291453	1	+	151277172	151291453	789624	3	54,170,336,	0,5946,13947,
#Partially deleted in new
chr4	151277170	151291453	chr4:151277170-151291453	3	+	151277172	151291453	789624	5	54,163,266,170,336,	0,2625,4977,5946,13947,
#Deleted in new
chr4	151279029	151279192	chr4:151279029-151279192	7	-	151279029	151279029	16724991	1	163,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	151300517	151300613	chr4:151300517-151300613	3	+	151300517	151300517	8553170	1	96,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	151333774	151353224	chr4:151333774-151353224	3	-	151333774	151333774	8553170	2	215,325,	0,19125,
#Deleted in new
chr4	151407550	151408835	chr4:151407550-151408835	3	-	151407550	151407550	8553170	2	157,201,	0,1084,
#Partially deleted in new
chr4	151409215	151566258	chr4:151409215-151566258	0	+	151409215	151409215	8553170	4	250,108,125,121,	0,45485,73308,156922,
#Partially deleted in new
chr4	151409245	151663632	chr4:151409245-151663632	3	+	151566259	151662754	789624	14	220,108,125,227,627,159,87,168,80,191,1134,179,139,1132,	0,45455,73278,156892,168204,177395,179594,220456,229431,237312,240213,246986,247514,253255,
#Partially deleted in new
chr4	151409245	151577464	chr4:151409245-151577464	0	+	151566259	151577464	789624	4	220,108,227,15,	0,45455,156892,168204,
#Partially deleted in new
chr4	151409351	151534776	chr4:151409351-151534776	0	+	151409351	151409351	8553170	3	114,108,82,	0,45349,125343,
#Partially deleted in new
chr4	151409351	151566299	chr4:151409351-151566299	0	+	151566259	151566299	789624	3	114,125,162,	0,73172,156786,
#Partially deleted in new
chr4	151436434	151577471	chr4:151436434-151577471	0	+	151566259	151577471	789624	5	83,108,125,227,22,	0,18266,46089,129703,141015,
#Partially deleted in new
chr4	151482608	151577524	chr4:151482608-151577524	0	+	151566259	151577524	789624	4	40,206,227,75,	0,52086,83529,94841,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	151533011	151663628	chr4:151533011-151663628	1	+	151566259	151662754	789624	12	37,227,627,159,87,168,80,191,1134,179,139,1128,	0,33126,44438,53629,55828,96690,105665,113546,116447,123220,123748,129489,
#Deleted in new
chr4	151576765	151576916	chr4:151576765-151576916	3	+	151576765	151576765	8553170	1	151,	0,
#Deleted in new
chr4	151667223	151670502	chr4:151667223-151670502	3	+	151667223	151667223	8553170	2	92,212,	0,3067,
#Deleted in new
chr4	151669785	151670503	chr4:151669785-151670503	3	+	151669785	151669785	8553170	1	718,	0,
#Partially deleted in new
chr4	151670503	151761023	chr4:151670503-151761023	3	-	151671173	151760982	789624	13	799,135,79,134,190,45,85,114,123,199,114,151,217,	0,2258,9309,18126,30825,33347,34681,37484,45505,46372,48921,88268,90303,
#Deleted in new
chr4	151670837	151675888	chr4:151670837-151675888	0	-	151670837	151670837	8553170	2	465,3280,	0,1771,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	151670848	151724480	chr4:151670848-151724480	0	-	151670848	151670848	8553170	11	454,135,79,134,128,45,85,114,123,199,5056,	0,1913,8964,17781,30480,33002,34336,37139,45160,46027,48576,
#Partially deleted in new
chr4	151670848	151760999	chr4:151670848-151760999	1	-	151671173	151760982	789624	12	454,135,79,134,190,45,85,114,199,114,151,193,	0,1913,8964,17781,30480,33002,34336,37139,46027,48576,87923,89958,
#Partially deleted in new
chr4	151670862	151760930	chr4:151670862-151760930	0	-	151716980	151760930	789624	13	440,135,79,134,190,45,85,114,123,126,114,151,124,	0,1899,8950,17767,30466,32988,34322,37125,45146,46013,48562,87909,89944,
#Partially deleted in new
chr4	151670887	151701518	chr4:151670887-151701518	0	-	151672823	151701518	789624	4	415,135,134,190,	0,1874,17742,30441,
#Partially deleted in new
chr4	151670943	151687083	chr4:151670943-151687083	0	-	151670943	151670943	8553170	4	359,135,79,176,	0,1818,8869,15964,
#Partially deleted in new
chr4	151671135	151691724	chr4:151671135-151691724	0	-	151671135	151671135	8553170	5	167,135,79,134,67,	0,1626,8677,17494,20522,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	151674482	151677893	chr4:151674482-151677893	3	+	151674482	151674482	8553170	3	2078,132,355,	0,2817,3056,
#Partially deleted in new
chr4	151688736	151716244	chr4:151688736-151716244	0	-	151688736	151688736	8553170	6	27,190,45,85,114,236,	0,12592,15114,16448,19251,27272,
#Partially deleted in new
chr4	151701395	151760953	chr4:151701395-151760953	0	-	151708089	151760953	789624	7	123,45,85,114,114,151,147,	0,2455,3789,6592,18029,57376,59411,
#Partially deleted in new
chr4	151703178	151760970	chr4:151703178-151760970	0	-	151708089	151760970	789624	6	717,85,114,114,151,164,	0,2006,4809,16246,55593,57628,
#Partially deleted in new
chr4	151703341	151760985	chr4:151703341-151760985	1	-	151703783	151760982	789624	8	554,85,114,123,199,114,151,179,	0,1843,4646,12667,13534,16083,55430,57465,
#Partially deleted in new
chr4	151705229	151717331	chr4:151705229-151717331	0	-	151705229	151705229	8553170	4	40,114,123,456,	0,2758,10779,11646,
#Partially deleted in new
chr4	151721945	151760990	chr4:151721945-151760990	1	-	151722194	151760982	789624	3	270,151,184,	0,36826,38861,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	151799499	151801348	chr4:151799499-151801348	3	+	151799499	151799499	8553170	3	118,123,523,	0,402,1326,
#Partially deleted in new
chr4	151887542	151891263	chr4:151887542-151891263	3	-	151887542	151887542	8553170	3	221,88,97,	0,948,3624,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	151904931	151928648	chr4:151904931-151928648	3	-	151904931	151904931	8553170	3	382,90,107,	0,1100,23610,
#Partially deleted in new
chr4	151919467	151943933	chr4:151919467-151943933	3	+	151919467	151919467	8553170	4	65,111,134,178,	0,2296,20311,24288,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	151955990	151969381	chr4:151955990-151969381	3	+	151955990	151955990	8553170	2	266,2386,	0,11005,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	151956189	151957498	chr4:151956189-151957498	0	+	151956189	151956189	8553170	2	67,345,	0,964,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	151971496	151971613	chr4:151971496-151971613	7	-	151971496	151971496	16724991	1	117,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	152100753	152104232	chr4:152100753-152104232	0	+	152100753	152100753	789624	3	64,97,606,	0,730,2873,
#Deleted in new
chr4	152100759	152101935	chr4:152100759-152101935	0	+	152100759	152100759	8553170	2	58,452,	0,724,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	152100817	152104720	chr4:152100817-152104720	3	+	152100817	152100817	789624	3	401,97,1094,	0,666,2809,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	152146384	152178573	chr4:152146384-152178573	3	-	152146384	152146384	8553170	5	132,95,135,104,86,	0,603,819,1638,32103,
#Partially deleted in new
chr4	152207420	152225870	chr4:152207420-152225870	3	-	152207420	152207420	8553170	3	248,207,40,	0,17823,18410,
#Partially deleted in new
chr4	152222467	152225399	chr4:152222467-152225399	1	-	152222467	152222467	8553170	2	292,156,	0,2776,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	152264149	152264445	chr4:152264149-152264445	3	-	152264149	152264149	8553170	1	296,	0,
#Partially deleted in new
chr4	152308282	152309983	chr4:152308282-152309983	3	-	152308282	152308282	8553170	2	297,113,	0,1588,
#Deleted in new
chr4	152317901	152318364	chr4:152317901-152318364	3	-	152317901	152317901	8553170	1	463,	0,
#Partially deleted in new
chr4	152320543	152536063	chr4:152320543-152536063	1	-	152322880	152411803	0	12	2606,211,226,182,114,137,124,135,142,83,570,1123,	0,3640,5462,7664,9128,10188,12052,17258,26386,29498,90759,214397,
#Partially deleted in new
chr4	152321257	152536063	chr4:152321257-152536063	1	-	152322880	152411803	0	14	1892,211,226,182,114,137,124,135,142,83,570,50,93,937,	0,2926,4748,6950,8414,9474,11338,16544,25672,28784,90045,91222,213683,213869,
#Partially deleted in new
chr4	152321257	152382529	chr4:152321257-152382529	1	-	152322880	152382335	0	11	1892,211,226,182,114,137,124,135,142,83,341,	0,2926,4748,6950,8414,9474,11338,16544,25672,28784,60931,
#Partially deleted in new
chr4	152321262	152352971	chr4:152321262-152352971	3	-	152322880	152352730	0	11	1887,211,226,182,114,137,124,135,142,83,502,	0,2921,4743,6945,8409,9469,11333,16539,25667,28779,31207,
#Partially deleted in new
chr4	152321262	152352768	chr4:152321262-152352768	1	-	152322880	152352730	0	11	1887,211,226,182,114,137,124,135,142,83,299,	0,2921,4743,6945,8409,9469,11333,16539,25667,28779,31207,
#Deleted in new
chr4	152322818	152329073	chr4:152322818-152329073	0	-	152322818	152322818	8553170	2	3413,866,	0,5389,
#Partially deleted in new
chr4	152322818	152411878	chr4:152322818-152411878	1	-	152322880	152411803	0	11	331,211,226,182,114,137,124,135,142,83,576,	0,1365,3187,5389,6853,7913,9777,14983,24111,27223,88484,
#Partially deleted in new
chr4	152322818	152348806	chr4:152322818-152348806	0	-	152322818	152322818	8553170	10	331,211,226,182,114,137,124,135,142,133,	0,1365,3187,5389,6853,7913,9777,14983,24111,25855,
#Deleted in new
chr4	152322874	152324436	chr4:152322874-152324436	0	-	152322874	152322874	8553170	2	275,253,	0,1309,
#Partially deleted in new
chr4	152326221	152332767	chr4:152326221-152332767	0	-	152326221	152326221	8553170	5	10,182,114,137,172,	0,1986,3450,4510,6374,
#Deleted in new
chr4	152337654	152338098	chr4:152337654-152338098	3	+	152337654	152337654	789624	2	83,289,	0,155,
#Deleted in new
chr4	152346811	152352696	chr4:152346811-152352696	0	-	152346811	152346811	8553170	3	260,83,227,	0,3230,5658,
#Partially deleted in new
chr4	152411159	152535191	chr4:152411159-152535191	1	-	152411272	152411803	789624	4	713,50,93,65,	0,1320,123781,123967,
#Deleted in new
chr4	152411328	152412606	chr4:152411328-152412606	0	-	152411328	152411803	789624	2	544,127,	0,1151,
#Partially deleted in new
chr4	152411592	152535241	chr4:152411592-152535241	0	-	152411592	152411803	789624	2	280,115,	0,123534,
#Partially deleted in new
chr4	152411592	152535241	chr4:152411592-152535241	0	-	152411592	152411803	789624	3	280,50,115,	0,887,123534,
#Deleted in new
chr4	152489326	152489416	chr4:152489326-152489416	3	-	152489326	152489326	5263520	1	90,	0,
#Partially deleted in new
chr4	152530272	152535210	chr4:152530272-152535210	0	-	152530272	152530272	8553170	3	578,93,84,	0,4668,4854,
#Deleted in new
chr4	152536263	152539263	chr4:152536263-152539263	3	+	152536263	152536263	789624	1	3000,	0,
#Deleted in new
chr4	152536427	152536516	chr4:152536427-152536516	3	+	152536427	152536427	5263520	1	89,	0,
#Partially deleted in new
chr4	152551276	152552364	chr4:152551276-152552364	7	-	152551276	152551276	16724991	2	724,53,	0,1035,
#Deleted in new
chr4	152613874	152614333	chr4:152613874-152614333	7	-	152613874	152613874	16724991	1	459,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	152618631	152680165	chr4:152618631-152680165	3	-	152628545	152679933	789624	7	9930,58,86,28,39,261,296,	0,22296,24456,25783,33906,34035,61238,
#Partially deleted in new
chr4	152628248	152641425	chr4:152628248-152641425	0	-	152628248	152628248	8553170	2	313,498,	0,12679,
#Partially deleted in new
chr4	152639772	152652928	chr4:152639772-152652928	1	-	152639772	152652928	789624	6	13,58,86,28,39,262,	0,1155,3315,4642,12765,12894,
#Partially deleted in new
chr4	152646557	152680012	chr4:152646557-152680012	1	-	152646978	152679933	789624	4	435,39,261,143,	0,5980,6109,33312,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	152666367	152670107	chr4:152666367-152670107	3	+	152666367	152666367	8553170	2	661,1710,	0,2030,
#Partially deleted in new
chr4	152769353	152779764	chr4:152769353-152779764	3	-	152769465	152771004	789624	2	2189,283,	0,10128,
#Partially deleted in new
chr4	152779936	152911909	chr4:152779936-152911909	1	+	152829633	152910219	789624	9	290,102,109,96,113,222,158,175,1846,	0,49688,83669,90816,92515,101026,102786,108196,130127,
#Partially deleted in new
chr4	152779936	152912357	chr4:152779936-152912357	1	+	152829633	152910219	789624	9	155,102,109,96,113,222,158,175,2294,	0,49688,83669,90816,92515,101026,102786,108196,130127,
#Partially deleted in new
chr4	152779938	152911074	chr4:152779938-152911074	1	+	152829633	152910219	789624	5	153,102,158,175,1011,	0,49686,102784,108194,130125,
#Partially deleted in new
chr4	152779970	152910664	chr4:152779970-152910664	3	+	152829633	152910219	789624	8	121,102,109,113,222,158,175,601,	0,49654,83635,92481,100992,102752,108162,130093,
#Partially deleted in new
chr4	152779984	152910244	chr4:152779984-152910244	1	+	152829633	152910219	789624	8	242,102,109,113,222,158,175,181,	0,49640,83621,92467,100978,102738,108148,130079,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	152779992	152810388	chr4:152779992-152810388	0	+	152779992	152779992	8553170	4	99,45,61,309,	0,27211,29680,30087,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	152780108	152810386	chr4:152780108-152810386	0	+	152780108	152780108	8553170	4	118,45,61,307,	0,27095,29564,29971,
#Deleted in new
chr4	152796062	152796831	chr4:152796062-152796831	7	-	152796062	152796062	16724991	1	769,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	152850642	152881173	chr4:152850642-152881173	0	+	152850642	152850642	8553170	5	64,109,96,113,211,	0,12963,20110,21809,30320,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	152850647	152881111	chr4:152850647-152881111	0	+	152850647	152850647	8553170	5	80,109,96,113,149,	0,12958,20105,21804,30315,
#Partially deleted in new
chr4	152883244	152910378	chr4:152883244-152910378	0	+	152883244	152883244	8553170	3	72,175,315,	0,4888,26819,
#Deleted in new
chr4	152927445	152928207	chr4:152927445-152928207	7	+	152927445	152927445	16724991	1	762,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	152936351	152979686	chr4:152936351-152979686	3	+	152943057	152976723	789624	12	58,628,62,103,86,101,71,108,71,118,165,5012,	0,6576,17147,17865,24213,24392,26462,26671,28553,31628,36025,38323,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr4	152942982	152979696	chr4:152942982-152979696	1	+	152943057	152976723	789624	11	573,62,103,86,101,71,108,71,118,165,5022,	0,10516,11234,17582,17761,19831,20040,21922,24997,29394,31692,
#Partially deleted in new
chr4	153152341	153157172	chr4:153152341-153157172	0	+	153152341	153152341	8553170	3	271,99,143,	0,4373,4688,
#Partially deleted in new
chr4	153152492	153293024	chr4:153152492-153293024	0	+	153270385	153293024	789624	4	120,182,238,43,	0,117845,123400,140489,
#Partially deleted in new
chr4	153153117	153336362	chr4:153153117-153336362	1	+	153270385	153334966	789624	12	153,182,238,152,181,724,104,168,169,71,141,1549,	0,117220,122775,139864,141187,142195,162367,162714,169530,170960,175412,181696,
#Partially deleted in new
chr4	153204445	153295683	chr4:153204445-153295683	0	+	153204445	153204445	8553170	4	115,185,238,371,	0,65889,71447,90867,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	153204445	153310261	chr4:153204445-153310261	1	+	153270385	153309806	789624	7	115,185,238,152,181,724,607,	0,65889,71447,88536,89859,90867,105209,
#Partially deleted in new
chr4	153204445	153222669	chr4:153204445-153222669	0	+	153204445	153204445	8553170	2	115,427,	0,17797,
#Partially deleted in new
chr4	153204465	153339320	chr4:153204465-153339320	3	+	153204530	153334966	789624	12	95,185,238,152,181,724,104,168,169,71,141,4507,	0,65869,71427,88516,89839,90847,111019,111366,118182,119612,124064,130348,
#Partially deleted in new
chr4	153222944	153276268	chr4:153222944-153276268	1	+	153270385	153276169	789624	3	95,185,376,	0,47390,52948,
#Partially deleted in new
chr4	153257378	153270519	chr4:153257378-153270519	0	+	153270385	153270519	789624	2	388,182,	0,12959,
#Partially deleted in new
chr4	153257402	153276275	chr4:153257402-153276275	1	+	153270385	153276169	789624	3	205,185,383,	0,12932,18490,
#Partially deleted in new
chr4	153257409	153294370	chr4:153257409-153294370	0	+	153276016	153294370	789624	4	198,238,152,66,	0,18483,35572,36895,
#Deleted in new
chr4	153265661	153265755	chr4:153265661-153265755	3	-	153265661	153265661	8553170	1	94,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	153266908	153267010	chr4:153266908-153267010	3	-	153266908	153266908	8553170	1	102,	0,
#Deleted in new
chr4	153307791	153308717	chr4:153307791-153308717	7	-	153307791	153307791	16724991	1	926,	0,
#Partially deleted in new
chr4	153322649	153324490	chr4:153322649-153324490	0	+	153322649	153324253	789624	2	167,413,	0,1428,
#Partially deleted in new
chr4	153344648	153415118	chr4:153344648-153415118	3	+	153344737	153414857	789624	8	92,66,58,149,75,115,45,368,	0,5415,11005,13825,49613,52570,64322,70102,
#Partially deleted in new
chr4	153344648	153415095	chr4:153344648-153415095	1	+	153344737	153408988	789624	7	92,66,58,149,75,45,345,	0,5415,11005,13825,49613,64322,70102,
#Partially deleted in new
chr4	153344661	153355809	chr4:153344661-153355809	0	+	153344661	153344661	8553170	3	79,66,156,	0,5402,10992,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	153344680	153414865	chr4:153344680-153414865	0	+	153344737	153361607	789624	10	60,66,58,149,122,39,75,115,45,115,	0,5383,10973,13793,16822,18306,49581,52538,64290,70070,
#Partially deleted in new
chr4	153345352	153394336	chr4:153345352-153394336	0	+	153350105	153394336	789624	5	154,66,58,149,75,	0,4711,10301,13121,48909,
#Partially deleted in new
chr4	153350063	153409145	chr4:153350063-153409145	1	+	153350105	153409047	789624	6	66,58,149,75,115,175,	0,5590,8410,44198,47155,58907,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	153381728	153382015	chr4:153381728-153382015	3	-	153381728	153381728	8553170	1	287,	0,
#Partially deleted in new
chr4	153466345	153636711	chr4:153466345-153636711	3	+	153466397	153636576	789624	35	176,71,44,69,124,117,111,78,154,59,109,94,154,171,70,118,142,110,73,128,143,187,186,150,629,149,125,167,186,79,83,121,89,140,411,	0,865,7499,83727,89441,90620,91912,114480,115061,116844,117218,118492,119112,119863,121396,122544,124707,126129,127453,129912,132244,135806,136196,136957,137456,145906,154410,155337,156552,159801,161259,166372,167846,169086,169955,
#Partially deleted in new
chr4	153466347	153557065	chr4:153466347-153557065	0	+	153466397	153550093	789624	5	174,71,69,124,100,	0,863,83725,89439,90618,
#Partially deleted in new
chr4	153466348	153636711	chr4:153466348-153636711	1	+	153466397	153636576	789624	35	173,71,44,69,124,117,111,78,154,59,109,97,154,171,70,118,142,110,73,128,143,187,186,150,629,149,125,167,186,79,83,121,89,140,411,	0,862,7496,83724,89438,90617,91909,114477,115058,116841,117215,118486,119109,119860,121393,122541,124704,126126,127450,129909,132241,135803,136193,136954,137453,145903,154407,155334,156549,159798,161256,166369,167843,169083,169952,
#Partially deleted in new
chr4	153554180	153558771	chr4:153554180-153558771	0	+	153554180	153554180	8553170	4	51,124,117,514,	0,1606,2785,4077,
#Partially deleted in new
chr4	153555895	153636711	chr4:153555895-153636711	0	+	153555895	153636576	789624	29	15,117,111,78,154,59,109,97,154,171,70,118,73,128,143,187,186,150,629,149,125,167,186,79,83,121,89,140,411,	0,1070,2362,24930,25511,27294,27668,28939,29562,30313,31846,32994,37903,40362,42694,46256,46646,47407,47906,56356,64860,65787,67002,70251,71709,76822,78296,79536,80405,
#Deleted in new
chr4	153583537	153586389	chr4:153583537-153586389	0	+	153583537	153583537	8553170	4	135,97,154,181,	0,1297,1920,2671,
#Partially deleted in new
chr4	153601954	153603614	chr4:153601954-153603614	0	+	153601954	153601954	8553170	3	384,186,312,	0,587,1348,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	153640167	153681180	chr4:153640167-153681180	7	+	153640167	153640167	16724991	3	312,43,2679,	0,807,38334,
#Deleted in new
chr4	153658571	153659653	chr4:153658571-153659653	7	+	153658571	153658571	16724991	1	1082,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	153678258	153680550	chr4:153678258-153680550	5	+	153678258	153678258	16724991	1	2292,	0,
#Partially deleted in new
chr4	153684069	153703646	chr4:153684069-153703646	0	+	153702907	153703646	789624	3	291,131,755,	0,3847,18822,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	153684260	153702962	chr4:153684260-153702962	0	+	153702907	153702962	789624	4	100,146,284,71,	0,3641,17966,18631,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	153684264	153705702	chr4:153684264-153705702	3	+	153702907	153705262	0	3	96,72,2811,	0,3652,18627,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	153684277	153705378	chr4:153684277-153705378	1	+	153702907	153705262	0	3	83,146,2487,	0,3624,18614,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	153684279	153705452	chr4:153684279-153705452	1	+	153702907	153705262	0	3	81,146,2561,	0,3622,18612,
#Partially deleted in new
chr4	153684279	153703004	chr4:153684279-153703004	0	+	153702907	153703004	789624	4	81,72,284,113,	0,3637,17947,18612,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	153684289	153688669	chr4:153684289-153688669	0	+	153684289	153684289	8553170	3	71,87,577,	0,3612,3803,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	153701499	153705699	chr4:153701499-153705699	1	+	153702907	153705262	0	1	4200,	0,
#Deleted in new
chr4	153702907	153705259	chr4:153702907-153705259	0	+	153702907	153705259	789624	2	221,409,	0,1943,
#Partially deleted in new
chr4	153710124	153760235	chr4:153710124-153760235	3	-	153710368	153759862	789624	9	365,102,134,121,108,155,142,38,439,	0,2350,5404,10059,13226,18082,38520,41313,49672,
#Partially deleted in new
chr4	153712482	153759970	chr4:153712482-153759970	0	-	153728354	153759862	789624	7	94,134,121,108,155,38,174,	0,3046,7701,10868,15724,38955,47314,
#Partially deleted in new
chr4	153713082	153760010	chr4:153713082-153760010	0	-	153720292	153759862	789624	6	2580,121,108,142,38,214,	0,7101,10268,35562,38355,46714,
#Partially deleted in new
chr4	153720183	153759997	chr4:153720183-153759997	0	-	153720183	153759862	789624	4	121,108,155,201,	0,3167,8023,39613,
#Partially deleted in new
chr4	153720326	153727722	chr4:153720326-153727722	3	+	153720326	153720326	8553170	5	60,160,40,126,135,	0,165,1059,2842,7261,
#Partially deleted in new
chr4	153723399	153759873	chr4:153723399-153759873	0	-	153748724	153759862	789624	5	59,155,183,38,77,	0,4807,25245,28038,36397,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	153748404	153759961	chr4:153748404-153759961	0	-	153748404	153748404	8553170	3	382,38,165,	0,3033,11392,
#Partially deleted in new
chr4	153748535	153760024	chr4:153748535-153760024	0	-	153748535	153748535	8553170	3	292,38,228,	0,2902,11261,
#Deleted in new
chr4	153780591	153789120	chr4:153780591-153789120	3	-	153781450	153788835	789624	3	1164,81,787,	0,5272,7742,
#Partially deleted in new
chr4	154142121	154298819	chr4:154142121-154298819	3	+	154142121	154142121	8553170	5	121,84,86,119,567,	0,59626,64846,130046,156131,
#Partially deleted in new
chr4	154201819	154269460	chr4:154201819-154269460	0	+	154201819	154201819	8553170	3	12,86,399,	0,5148,67242,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr4	154231741	154495570	chr4:154231741-154495570	3	-	154234535	154491355	789624	20	5418,133,287,131,152,212,114,858,210,135,240,844,158,100,188,1017,237,232,192,6267,	0,7428,8795,10900,23777,27803,38158,66109,72927,73355,84006,88637,90589,96351,97781,100736,103126,134468,145511,257562,
#Deleted in new
chr4	154235979	154237598	chr4:154235979-154237598	3	+	154235979	154235979	8553170	1	1619,	0,
#Partially deleted in new
chr4	154255608	154284579	chr4:154255608-154284579	0	-	154255608	154255608	8553170	4	62,212,114,124,	0,3936,14291,28847,
#Deleted in new
chr4	154261734	154262193	chr4:154261734-154262193	3	+	154261734	154261734	8553170	1	459,	0,
#Partially deleted in new
chr4	154269063	154298521	chr4:154269063-154298521	1	+	154269063	154269063	8553170	3	167,119,269,	0,3104,29189,
#Partially deleted in new
chr4	154322644	154491716	chr4:154322644-154491716	1	-	154323237	154491355	789624	8	685,100,188,1017,237,232,192,2413,	0,5448,6878,9833,12223,43565,54608,166659,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	154332888	154335168	chr4:154332888-154335168	0	-	154332888	154332888	8553170	1	2280,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	154333055	154355710	chr4:154333055-154355710	0	-	154333055	154333055	8553170	4	439,237,59,122,	0,1812,19394,22533,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	154333269	154355730	chr4:154333269-154355730	0	-	154333269	154333269	8553170	4	225,109,93,142,	0,1598,21455,22319,
#Deleted in new
chr4	154373885	154374347	chr4:154373885-154374347	7	+	154373885	154373885	16724991	1	462,	0,
#Partially deleted in new
chr4	154486442	154491334	chr4:154486442-154491334	0	-	154486442	154486442	8553170	2	78,2031,	0,2861,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	154523486	154524807	chr4:154523486-154524807	7	+	154523486	154523486	16724991	2	190,832,	0,489,
#Partially deleted in new
chr4	154535005	154550435	chr4:154535005-154550435	3	-	154536684	154550308	0	15	1739,194,140,109,103,102,150,93,102,88,91,54,143,107,136,	0,2280,2963,4099,4945,5588,5779,7181,9439,10830,11117,12005,12705,13823,15294,
#Deleted in new
chr4	154536431	154537542	chr4:154536431-154537542	0	-	154536431	154536431	8553170	2	313,257,	0,854,
#Deleted in new
chr4	154536520	154540936	chr4:154536520-154540936	0	-	154538078	154540936	789624	7	224,194,114,109,103,102,152,	0,765,1448,2584,3430,4073,4264,
#Deleted in new
chr4	154536599	154539184	chr4:154536599-154539184	0	-	154536643	154539184	789624	3	145,140,80,	0,1369,2505,
#Partially deleted in new
chr4	154536618	154550397	chr4:154536618-154550397	1	-	154536684	154550308	0	15	126,194,140,109,103,102,150,93,102,88,91,27,143,107,98,	0,667,1350,2486,3332,3975,4166,5568,7826,9217,9504,10419,11092,12210,13681,
#Deleted in new
chr4	154539013	154540272	chr4:154539013-154540272	0	-	154539013	154539013	8553170	2	200,322,	0,937,
#Partially deleted in new
chr4	154540670	154550392	chr4:154540670-154550392	0	-	154545840	154550308	789624	9	25,150,93,102,88,54,143,107,93,	0,114,1516,3774,5165,6340,7040,8158,9629,
#Partially deleted in new
chr4	154541957	154545954	chr4:154541957-154545954	0	-	154541957	154541957	8553170	3	322,102,119,	0,2487,3878,
#Partially deleted in new
chr4	154542230	154549141	chr4:154542230-154549141	0	-	154542230	154549055	789624	8	49,102,88,91,54,143,107,89,	0,2214,3605,3892,4780,5480,6598,6822,
#Deleted in new
chr4	154543932	154544037	chr4:154543932-154544037	3	-	154543932	154543932	8553170	1	105,	0,
#Deleted in new
chr4	154545852	154550383	chr4:154545852-154550383	0	-	154545852	154545852	8553170	5	361,54,143,107,84,	0,1158,1858,2976,4447,
#Deleted in new
chr4	154546149	154550394	chr4:154546149-154550394	0	-	154548876	154550308	789624	6	64,54,143,107,109,95,	0,861,1561,2679,3514,4150,
#Deleted in new
chr4	154546542	154550400	chr4:154546542-154550400	0	-	154546542	154546542	8553170	4	522,143,107,101,	0,1168,2286,3757,
#Deleted in new
chr4	154547481	154550396	chr4:154547481-154550396	0	-	154547481	154547481	8553170	3	372,107,97,	0,1347,2818,
#Deleted in new
chr4	154555207	154555985	chr4:154555207-154555985	7	+	154555207	154555207	16724991	1	778,	0,
#Partially deleted in new
chr4	154562955	154571086	chr4:154562955-154571086	3	+	154563018	154570650	0	8	177,192,184,228,114,126,286,668,	0,2852,3533,4637,5425,6226,6558,7463,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	154563010	154566522	chr4:154563010-154566522	0	+	154563010	154563010	8553170	3	122,814,34,	0,2175,3478,
#Partially deleted in new
chr4	154563011	154566749	chr4:154563011-154566749	0	+	154563011	154563011	8553170	3	121,192,261,	0,2796,3477,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	154563016	154567615	chr4:154563016-154567615	0	+	154563018	154565209	789624	5	116,50,192,184,23,	0,2169,2791,3472,4576,
#Partially deleted in new
chr4	154563025	154570721	chr4:154563025-154570721	1	+	154567759	154570650	789624	6	107,228,114,126,286,303,	0,4567,5355,6156,6488,7393,
#Partially deleted in new
chr4	154563037	154570799	chr4:154563037-154570799	0	+	154563037	154563037	8553170	7	95,192,184,228,114,126,381,	0,2770,3451,4555,5343,6144,7381,
#Deleted in new
chr4	154565780	154567854	chr4:154565780-154567854	0	+	154565780	154565780	8553170	3	219,184,262,	0,708,1812,
#Deleted in new
chr4	154583125	154590766	chr4:154583125-154590766	3	-	154584123	154590687	0	6	1708,1381,146,184,126,133,	0,2412,4386,5667,6311,7508,
#Deleted in new
chr4	154585259	154590766	chr4:154585259-154590766	1	-	154585493	154590687	0	5	1659,146,184,126,133,	0,2252,3533,4177,5374,
#Deleted in new
chr4	154585280	154590744	chr4:154585280-154590744	1	-	154585483	154590687	789624	6	430,133,146,184,126,111,	0,1505,2231,3512,4156,5353,
#Partially deleted in new
chr4	154604133	154612849	chr4:154604133-154612849	3	-	154604339	154612609	0	10	221,170,278,185,134,131,94,184,45,318,	0,763,2571,4332,5496,5933,7671,7884,8257,8398,
#Partially deleted in new
chr4	154604164	154612659	chr4:154604164-154612659	0	-	154604164	154604164	8553170	8	190,170,278,185,568,94,418,128,	0,732,2540,4301,5465,7640,7853,8367,
#Partially deleted in new
chr4	154604170	154609843	chr4:154604170-154609843	0	-	154604170	154604170	8553170	4	896,278,185,214,	0,2534,4295,5459,
#Partially deleted in new
chr4	154604172	154612643	chr4:154604172-154612643	1	-	154604339	154612609	789624	10	182,170,278,185,158,131,94,184,45,112,	0,724,2532,4293,5457,5894,7632,7845,8218,8359,
#Partially deleted in new
chr4	154604575	154612648	chr4:154604575-154612648	1	-	154604833	154612609	0	9	491,278,185,134,131,94,184,45,117,	0,2129,3890,5054,5491,7229,7442,7815,7956,
#Partially deleted in new
chr4	154604609	154612635	chr4:154604609-154612635	1	-	154604833	154612609	789624	9	457,278,185,158,131,94,184,45,104,	0,2095,3856,5020,5457,7195,7408,7781,7922,
#Partially deleted in new
chr4	154608638	154612967	chr4:154608638-154612967	0	-	154608638	154611896	789624	7	12,134,131,94,150,45,223,	0,991,1428,3166,3379,3752,4106,
#Deleted in new
chr4	154609629	154612797	chr4:154609629-154612797	0	-	154609629	154611896	789624	6	134,131,94,184,45,53,	0,437,2175,2388,2761,3115,
#Deleted in new
chr4	154609942	154612656	chr4:154609942-154612656	0	-	154609942	154609942	8553170	5	255,94,184,45,125,	0,1862,2075,2448,2589,
#Deleted in new
chr4	154611235	154612635	chr4:154611235-154612635	0	-	154611235	154611235	8553170	4	663,184,45,104,	0,782,1155,1296,
#Deleted in new
chr4	154611838	154612656	chr4:154611838-154612656	0	-	154611838	154611838	8553170	2	597,125,	0,693,
#Deleted in new
chr4	154611972	154612611	chr4:154611972-154612611	0	-	154611972	154611972	8553170	3	229,45,80,	0,418,559,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	154626944	154699900	chr4:154626944-154699900	0	+	154626944	154626944	8553170	3	205,68,1503,	0,9384,71453,
#Partially deleted in new
chr4	154626960	154744533	chr4:154626960-154744533	0	+	154744326	154744533	789624	4	189,68,81,208,	0,9368,101742,117365,
#Partially deleted in new
chr4	154627071	154748320	chr4:154627071-154748320	0	+	154627071	154627071	8553170	6	78,68,81,140,104,132,	0,9257,101631,102367,104611,121117,
#Deleted in new
chr4	154724585	154724880	chr4:154724585-154724880	7	+	154724585	154724585	16724991	1	295,	0,
#Partially deleted in new
chr4	154740837	154751035	chr4:154740837-154751035	3	+	154744326	154749136	789624	3	61,541,2052,	0,3488,8146,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	154743970	154753118	chr4:154743970-154753118	1	+	154744326	154749136	789624	3	252,541,4135,	0,355,5013,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	154743999	154753118	chr4:154743999-154753118	0	+	154743999	154743999	8553170	2	867,4135,	0,4984,
#Deleted in new
chr4	154745373	154749420	chr4:154745373-154749420	0	+	154745373	154745373	8553170	3	135,200,437,	0,2815,3610,
#Deleted in new
chr4	154745446	154749180	chr4:154745446-154749180	0	+	154745446	154745446	8553170	3	96,200,197,	0,2742,3537,
#Partially deleted in new
chr4	154754755	154781873	chr4:154754755-154781873	3	-	154754755	154754755	8553170	4	109,117,214,85,	0,6169,15525,27033,
#Deleted in new
chr4	154770567	154770916	chr4:154770567-154770916	7	+	154770567	154770567	16724991	1	349,	0,
#Partially deleted in new
chr4	154781212	154828813	chr4:154781212-154828813	3	+	154796752	154828067	789624	5	224,162,468,783,946,	0,15529,16598,17569,46655,
#Partially deleted in new
chr4	154781212	154827385	chr4:154781212-154827385	1	+	154796752	154820418	789624	6	224,162,468,783,60,618,	0,15529,16598,17569,39150,45555,
#Partially deleted in new
chr4	154781504	154828812	chr4:154781504-154828812	1	+	154796752	154826778	789624	5	168,162,468,783,2045,	0,15237,16306,17277,45263,
#Partially deleted in new
chr4	154781816	154798058	chr4:154781816-154798058	0	+	154796752	154798058	789624	3	116,162,248,	0,14925,15994,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	154787117	154787278	chr4:154787117-154787278	3	+	154787117	154787117	8553170	1	161,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	154790290	154790484	chr4:154790290-154790484	3	+	154790290	154790290	8553170	1	194,	0,
#Partially deleted in new
chr4	155173715	155360298	chr4:155173715-155360298	0	+	155173715	155173715	8553170	5	81,127,165,114,14,	0,442,180493,183373,186569,
#Deleted in new
chr4	155206528	155208431	chr4:155206528-155208431	3	-	155206528	155206528	8553170	3	1287,152,129,	0,1496,1774,
#Deleted in new
chr4	155207165	155209027	chr4:155207165-155209027	0	-	155207165	155207165	8553170	3	650,152,66,	0,859,1796,
#Partially deleted in new
chr4	155208628	155217076	chr4:155208628-155217076	3	+	155213939	155215085	0	2	441,3185,	0,5263,
#Partially deleted in new
chr4	155208734	155217078	chr4:155208734-155217078	1	+	155213939	155215085	0	2	331,3187,	0,5157,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	155276688	155360300	chr4:155276688-155360300	0	+	155276688	155276688	8553170	6	26,72,165,77,114,16,	0,62290,65571,72692,80400,83596,
#Deleted in new
chr4	155286161	155287136	chr4:155286161-155287136	3	-	155286161	155286161	8553170	2	285,85,	0,890,
#Partially deleted in new
chr4	155304966	155360346	chr4:155304966-155360346	0	+	155304966	155304966	8553170	5	185,264,165,114,62,	0,41330,49242,52122,55318,
#Partially deleted in new
chr4	155304971	155351167	chr4:155304971-155351167	1	+	155304971	155304971	8553170	5	180,165,264,77,141,	0,37288,41325,44409,46055,
#Partially deleted in new
chr4	155304996	155357202	chr4:155304996-155357202	0	+	155304996	155304996	8553170	6	155,264,77,63,165,114,	0,41300,44384,47295,49212,52092,
#Partially deleted in new
chr4	155304996	155346557	chr4:155304996-155346557	1	+	155304996	155304996	8553170	4	95,73,165,261,	0,4007,37263,41300,
#Partially deleted in new
chr4	155304997	155346369	chr4:155304997-155346369	1	+	155304997	155304997	8553170	5	94,93,245,165,73,	0,11738,24711,37262,41299,
#Partially deleted in new
chr4	155304997	155354374	chr4:155304997-155354374	1	+	155304997	155304997	8553170	4	154,220,165,166,	0,24736,37262,49211,
#Partially deleted in new
chr4	155304997	155357196	chr4:155304997-155357196	0	+	155304997	155304997	8553170	5	154,137,77,165,108,	0,41426,44383,49211,52091,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	155304997	155329950	chr4:155304997-155329950	1	+	155304997	155304997	8553170	4	154,73,256,242,	0,4006,16457,24711,
#Partially deleted in new
chr4	155305011	155346559	chr4:155305011-155346559	1	+	155305011	155305011	8553170	3	140,165,263,	0,37248,41285,
#Partially deleted in new
chr4	155305027	155330310	chr4:155305027-155330310	1	+	155305027	155305027	8553170	2	124,602,	0,24681,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	155321642	155351181	chr4:155321642-155351181	1	+	155321642	155321642	8553170	9	68,245,181,72,66,165,264,77,155,	0,8066,16194,17336,18326,20617,24654,27738,29384,
#Partially deleted in new
chr4	155342259	155360346	chr4:155342259-155360346	0	+	155342259	155342259	8553170	5	165,137,165,114,62,	0,4164,11949,14829,18025,
#Partially deleted in new
chr4	155342259	155360346	chr4:155342259-155360346	0	+	155342259	155342259	8553170	6	165,264,63,165,114,62,	0,4037,10032,11949,14829,18025,
#Partially deleted in new
chr4	155342315	155360346	chr4:155342315-155360346	0	+	155342315	155342315	8553170	6	109,264,63,165,114,62,	0,3981,9976,11893,14773,17969,
#Partially deleted in new
chr4	155342320	155357202	chr4:155342320-155357202	0	+	155342320	155342320	8553170	7	104,264,77,181,63,165,114,	0,3976,7060,8706,9971,11888,14768,
#Partially deleted in new
chr4	155342361	155357202	chr4:155342361-155357202	0	+	155342361	155342361	8553170	6	63,264,77,63,165,114,	0,3935,7019,9930,11847,14727,
#Partially deleted in new
chr4	155342657	155376970	chr4:155342657-155376970	3	-	155347782	155375850	789624	14	5248,133,146,162,90,169,71,248,94,227,321,85,139,200,	0,9938,10254,10521,12413,13058,14791,17510,19390,25928,30478,32279,33118,34113,
#Partially deleted in new
chr4	155347740	155376836	chr4:155347740-155376836	1	-	155347782	155375850	789624	14	165,133,146,162,90,169,71,176,94,227,321,85,139,66,	0,4855,5171,5438,7330,7975,9708,12427,14307,20845,25395,27196,28035,29030,
#Deleted in new
chr4	155349670	155352686	chr4:155349670-155352686	0	-	155350230	155352686	789624	2	569,91,	0,2925,
#Partially deleted in new
chr4	155352683	155376970	chr4:155352683-155376970	0	-	155355150	155375850	789624	12	45,146,162,90,71,248,94,227,321,85,139,200,	0,228,495,2387,4765,7484,9364,15902,20452,22253,23092,24087,
#Partially deleted in new
chr4	155353252	155376885	chr4:155353252-155376885	0	-	155353252	155375850	789624	11	88,90,169,71,248,94,224,321,85,139,115,	0,1818,2463,4196,6915,8795,15333,19883,21684,22523,23518,
#Partially deleted in new
chr4	155354215	155360461	chr4:155354215-155360461	1	+	155354215	155354215	789624	3	158,114,177,	0,2873,6069,
#Partially deleted in new
chr4	155357106	155363308	chr4:155357106-155363308	0	+	155357106	155357106	8553170	4	96,181,41,492,	0,3178,5157,5710,
#Partially deleted in new
chr4	155357106	155363147	chr4:155357106-155363147	0	+	155357106	155357106	8553170	5	96,181,122,41,331,	0,3178,4094,5157,5710,
#Partially deleted in new
chr4	155357106	155361222	chr4:155357106-155361222	0	+	155357106	155357106	8553170	3	96,181,237,	0,3178,3879,
#Partially deleted in new
chr4	155357106	155368850	chr4:155357106-155368850	0	+	155357106	155357106	8553170	3	96,181,319,	0,3178,11425,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	155357106	155367387	chr4:155357106-155367387	0	+	155357106	155357106	8553170	5	96,181,41,65,141,	0,3178,5157,5358,10140,
#Partially deleted in new
chr4	155357106	155363278	chr4:155357106-155363278	0	+	155357106	155357106	8553170	6	96,181,122,41,65,462,	0,3178,4094,5157,5358,5710,
#Partially deleted in new
chr4	155357106	155363196	chr4:155357106-155363196	0	+	155357106	155357106	8553170	3	96,181,380,	0,3178,5710,
#Partially deleted in new
chr4	155357106	155368841	chr4:155357106-155368841	0	+	155357106	155357106	8553170	4	96,181,41,310,	0,3178,5157,11425,
#Partially deleted in new
chr4	155357106	155362985	chr4:155357106-155362985	0	+	155357106	155357106	8553170	4	96,181,122,169,	0,3178,4094,5710,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	155357106	155367341	chr4:155357106-155367341	0	+	155357106	155357106	8553170	5	96,181,122,41,95,	0,3178,4094,5157,10140,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	155357107	155367531	chr4:155357107-155367531	0	+	155357107	155357107	8553170	3	95,181,285,	0,3177,10139,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	155357115	155367509	chr4:155357115-155367509	0	+	155357115	155357115	8553170	4	87,181,254,263,	0,3169,5701,10131,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	155357119	155381346	chr4:155357119-155381346	0	+	155357119	155357119	8553170	6	83,181,122,41,132,175,	0,3165,4081,5144,21933,24052,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	155357174	155381694	chr4:155357174-155381694	0	+	155357174	155357174	8553170	3	28,132,523,	0,21878,23997,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	155368165	155376885	chr4:155368165-155376885	1	-	155368501	155373400	789624	4	644,321,85,115,	0,4970,6771,8605,
#Partially deleted in new
chr4	155372995	155376813	chr4:155372995-155376813	0	-	155372995	155372995	8553170	4	461,85,139,43,	0,1941,2780,3775,
#Deleted in new
chr4	155375003	155376778	chr4:155375003-155376778	0	-	155375003	155375850	789624	3	18,139,403,	0,772,1372,
#Deleted in new
chr4	155381041	155381239	chr4:155381041-155381239	7	-	155381041	155381041	16724991	1	198,	0,
#Deleted in new
chr4	155383106	155384102	chr4:155383106-155384102	7	-	155383106	155383106	16724991	2	193,153,	0,843,
#Deleted in new
chr4	155385351	155385492	chr4:155385351-155385492	7	+	155385351	155385351	16724991	1	141,	0,
#Deleted in new
chr4	155451616	155452405	chr4:155451616-155452405	7	-	155451616	155451616	16724991	1	789,	0,
#Deleted in new
chr4	155452525	155453044	chr4:155452525-155453044	7	+	155452525	155452525	16724991	1	519,	0,
#Deleted in new
chr4	155453048	155454803	chr4:155453048-155454803	7	-	155453048	155453048	16724991	1	1755,	0,
#Deleted in new
chr4	155455049	155456411	chr4:155455049-155456411	7	-	155455049	155455049	16724991	1	1362,	0,
#Deleted in new
chr4	155456637	155456981	chr4:155456637-155456981	7	-	155456637	155456637	16724991	2	57,69,	0,275,
#Deleted in new
chr4	155457179	155457960	chr4:155457179-155457960	7	-	155457179	155457179	16724991	1	781,	0,
#Deleted in new
chr4	155457960	155458640	chr4:155457960-155458640	7	-	155457960	155457960	16724991	1	680,	0,
#Deleted in new
chr4	155458869	155459563	chr4:155458869-155459563	7	-	155458869	155458869	16724991	1	694,	0,
#Deleted in new
chr4	155459703	155461237	chr4:155459703-155461237	7	-	155459703	155459703	16724991	1	1534,	0,
#Deleted in new
chr4	155461632	155462663	chr4:155461632-155462663	7	-	155461632	155461632	16724991	1	1031,	0,
#Deleted in new
chr4	155462872	155463823	chr4:155462872-155463823	7	-	155462872	155462872	16724991	1	951,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	155515726	155517459	chr4:155515726-155517459	3	+	155515726	155515726	8553170	2	233,286,	0,1447,
#Partially deleted in new
chr4	155666710	155730432	chr4:155666710-155730432	1	+	155696867	155730231	0	10	255,74,367,62,59,710,486,144,155,403,	0,635,30045,37221,41525,43831,46387,50448,55327,63319,
#Partially deleted in new
chr4	155666725	155730630	chr4:155666725-155730630	1	+	155696867	155730231	0	11	240,74,94,367,62,59,710,486,144,155,601,	0,620,1364,30030,37206,41510,43816,46372,50433,55312,63304,
#Partially deleted in new
chr4	155666725	155730622	chr4:155666725-155730622	1	+	155696867	155717214	789624	9	240,74,94,367,62,59,144,155,593,	0,620,1364,30030,37206,41510,50433,55312,63304,
#Partially deleted in new
chr4	155666827	155711381	chr4:155666827-155711381	0	+	155666827	155666827	8553170	6	138,74,367,62,59,840,	0,518,29928,37104,41408,43714,
#Partially deleted in new
chr4	155666847	155722569	chr4:155666847-155722569	1	+	155696867	155722196	0	9	118,74,367,62,59,710,486,144,532,	0,498,29908,37084,41388,43694,46250,50311,55190,
#Partially deleted in new
chr4	155666935	155710611	chr4:155666935-155710611	0	+	155666935	155666935	8553170	7	30,74,94,188,62,59,70,	0,410,29820,29999,36996,41300,43606,
#Partially deleted in new
chr4	155666962	155730416	chr4:155666962-155730416	1	+	155696867	155730231	0	10	237,74,317,62,59,710,486,144,155,387,	0,383,29843,36969,41273,43579,46135,50196,55075,63067,
#Partially deleted in new
chr4	155667041	155730445	chr4:155667041-155730445	0	+	155696867	155717214	789624	6	179,74,305,144,155,416,	0,304,29714,50117,54996,62988,
#Partially deleted in new
chr4	155667103	155732347	chr4:155667103-155732347	0	+	155696867	155710722	789624	10	117,74,367,62,59,570,486,144,155,2318,	0,242,29652,36828,41132,43578,45994,50055,54934,62926,
#Partially deleted in new
chr4	155667128	155732345	chr4:155667128-155732345	1	+	155710939	155730231	789624	10	92,74,188,62,59,710,486,144,155,2316,	0,217,29806,36803,41107,43413,45969,50030,54909,62901,
#Partially deleted in new
chr4	155667197	155732349	chr4:155667197-155732349	3	+	155696867	155730231	0	10	23,74,367,62,59,710,486,144,155,2320,	0,148,29558,36734,41038,43344,45900,49961,54840,62832,
#Partially deleted in new
chr4	155667337	155730442	chr4:155667337-155730442	0	+	155696867	155717214	789624	7	82,367,62,59,144,155,413,	0,29418,36594,40898,49821,54700,62692,
#Partially deleted in new
chr4	155667662	155730432	chr4:155667662-155730432	1	+	155696867	155730231	0	9	270,367,62,59,710,486,144,155,403,	0,29093,36269,40573,42879,45435,49496,54375,62367,
#Deleted in new
chr4	155734447	155737062	chr4:155734447-155737062	3	+	155734447	155734447	8553170	1	2615,	0,
#Partially deleted in new
chr4	155758991	155806790	chr4:155758991-155806790	1	+	155777549	155806409	789624	13	152,101,119,198,231,117,134,198,238,141,155,127,405,	0,15976,18532,30722,34864,36349,37385,40885,43350,44632,45601,46111,47394,
#Partially deleted in new
chr4	155759020	155806618	chr4:155759020-155806618	1	+	155759140	155806409	789624	15	123,74,101,119,66,198,231,117,134,198,238,141,155,127,233,	0,766,15947,18503,26243,30693,34835,36320,37356,40856,43321,44603,45572,46082,47365,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	155759025	155806738	chr4:155759025-155806738	1	+	155772736	155806409	0	15	118,74,152,101,119,198,231,117,134,198,238,141,155,127,353,	0,761,13576,15942,18498,30688,34830,36315,37351,40851,43316,44598,45567,46077,47360,
#Partially deleted in new
chr4	155759030	155806833	chr4:155759030-155806833	1	+	155777549	155806409	789624	15	113,186,74,101,119,198,231,117,134,198,367,141,155,127,448,	0,325,756,15937,18493,30683,34825,36310,37346,40846,43182,44593,45562,46072,47355,
#Partially deleted in new
chr4	155759058	155807591	chr4:155759058-155807591	3	+	155759140	155806409	0	14	85,74,101,119,198,231,117,134,198,238,141,155,127,1206,	0,728,15909,18465,30655,34797,36282,37318,40818,43283,44565,45534,46044,47327,
#Partially deleted in new
chr4	155759089	155806548	chr4:155759089-155806548	1	+	155759140	155806409	0	14	54,74,101,119,198,231,117,134,198,139,141,155,127,163,	0,697,15878,18434,30624,34766,36251,37287,40787,43351,44534,45503,46013,47296,
#Partially deleted in new
chr4	155759458	155806824	chr4:155759458-155806824	1	+	155777549	155806409	789624	14	83,74,101,119,198,231,117,134,198,238,141,155,127,439,	0,328,15509,18065,30255,34397,35882,36918,40418,42883,44165,45134,45644,46927,
#Partially deleted in new
chr4	155829728	155866273	chr4:155829728-155866273	3	-	155829855	155866226	789624	10	318,92,169,57,148,150,126,238,307,87,	0,2095,6960,9084,12478,13952,22462,24348,33719,36458,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	155854737	155905156	chr4:155854737-155905156	0	+	155854737	155854737	8553170	6	127,29,51,168,106,90,	0,564,4110,29194,49280,50329,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	155854756	155865102	chr4:155854756-155865102	0	+	155854756	155854756	8553170	4	108,29,51,591,	0,545,4091,9755,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	155854761	155910110	chr4:155854761-155910110	0	+	155908904	155910110	789624	8	103,29,51,106,91,71,128,86,	0,540,4086,49256,50305,52960,54125,55263,
#Partially deleted in new
chr4	155854770	155910062	chr4:155854770-155910062	0	+	155908904	155910062	789624	7	94,29,106,91,71,128,38,	0,531,49247,50296,52951,54116,55254,
#Deleted in new
chr4	155903692	155905794	chr4:155903692-155905794	0	+	155903692	155903692	8553170	3	101,106,728,	0,325,1374,
#Partially deleted in new
chr4	155903694	155920406	chr4:155903694-155920406	3	+	155903758	155919990	0	12	99,106,91,71,128,187,108,112,58,80,91,570,	0,323,1372,4027,5192,6330,7802,10628,12160,13700,14454,16142,
#Partially deleted in new
chr4	155905819	155920398	chr4:155905819-155920398	0	+	155905819	155905819	8553170	9	1973,128,27,108,112,58,80,91,562,	0,3067,4365,5677,8503,10035,11575,12329,14017,
#Partially deleted in new
chr4	155914340	155918859	chr4:155914340-155918859	0	+	155914340	155914340	8553170	5	94,58,80,91,56,	0,1514,3054,3808,4463,
#Partially deleted in new
chr4	155924117	155953917	chr4:155924117-155953917	3	-	155926035	155953847	789624	8	1953,93,164,122,168,140,109,205,	0,4218,5424,13244,15253,18199,19038,29595,
#Partially deleted in new
chr4	156006477	156006988	chr4:156006477-156006988	7	+	156006477	156006477	16724991	1	511,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	156585978	156590039	chr4:156585978-156590039	3	+	156585978	156585978	8553170	2	185,808,	0,3253,
#Deleted in new
chr4	156634493	156642454	chr4:156634493-156642454	3	-	156634493	156634493	8553170	3	378,39,190,	0,2074,7771,
#Deleted in new
chr4	156634497	156642307	chr4:156634497-156642307	0	-	156634497	156634497	8553170	2	374,43,	0,7767,
#Deleted in new
chr4	156642579	156643569	chr4:156642579-156643569	3	+	156642579	156642579	8553170	2	59,116,	0,874,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	156686663	156692636	chr4:156686663-156692636	3	+	156686663	156686663	8553170	2	308,639,	0,5334,
#Partially deleted in new
chr4	156760453	156971394	chr4:156760453-156971394	3	-	156763089	156970903	789624	6	2753,218,208,181,196,609,	0,7319,12232,50383,89767,210332,
#Partially deleted in new
chr4	156761613	156971315	chr4:156761613-156971315	0	-	156861454	156970903	789624	7	1593,218,208,181,196,61,530,	0,6159,11072,49223,88607,99815,209172,
#Partially deleted in new
chr4	156762802	156773717	chr4:156762802-156773717	0	-	156762802	156762802	8553170	5	404,104,29,208,41,	0,4970,5159,9883,10874,
#Partially deleted in new
chr4	156762947	156850272	chr4:156762947-156850272	0	-	156779146	156850272	789624	8	259,218,208,109,71,32,65,52,	0,4825,9738,15253,16140,47889,48005,87273,
#Partially deleted in new
chr4	156763089	156970903	chr4:156763089-156970903	1	-	156763089	156970903	789624	6	117,29,208,181,196,118,	0,4872,9596,47747,87131,207696,
#Deleted in new
chr4	156767781	156774478	chr4:156767781-156774478	0	-	156767781	156767781	8553170	3	209,208,107,	0,4904,6590,
#Partially deleted in new
chr4	156770181	156810891	chr4:156770181-156810891	0	-	156770181	156770181	8553170	3	462,208,55,	0,2504,40655,
#Partially deleted in new
chr4	156772788	156873972	chr4:156772788-156873972	0	-	156772788	156772788	8553170	5	105,93,196,61,67,	0,63126,77432,88640,101117,
#Deleted in new
chr4	156876434	156876820	chr4:156876434-156876820	3	+	156876434	156876434	8553170	1	386,	0,
#Deleted in new
chr4	156886644	156886862	chr4:156886644-156886862	3	+	156886644	156886644	8553170	1	218,	0,
#Deleted in new
chr4	156967328	156970965	chr4:156967328-156970965	0	-	156967328	156967328	8553170	2	417,180,	0,3457,
#Deleted in new
chr4	156972630	156972956	chr4:156972630-156972956	7	+	156972630	156972630	16724991	1	326,	0,
#Partially deleted in new
chr4	156986371	156986693	chr4:156986371-156986693	3	-	156986371	156986371	8553170	1	322,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	157064556	157064663	chr4:157064556-157064663	3	+	157064556	157064556	8553170	1	107,	0,
#Partially deleted in new
chr4	157076056	157172090	chr4:157076056-157172090	3	+	157078024	157170728	789624	10	241,151,107,68,230,83,141,153,293,1659,	0,1939,44499,46273,60412,60747,62752,67750,76661,94375,
#Partially deleted in new
chr4	157076124	157172090	chr4:157076124-157172090	1	+	157078024	157170439	789624	9	173,151,107,68,230,83,141,153,1659,	0,1871,44431,46205,60344,60679,62684,67682,94307,
#Partially deleted in new
chr4	157076165	157136511	chr4:157076165-157136511	0	+	157078024	157084682	789624	7	132,151,61,12,107,68,43,	0,1830,8498,15205,44390,46164,60303,
#Partially deleted in new
chr4	157076194	157170905	chr4:157076194-157170905	1	+	157078024	157170480	789624	3	103,151,474,	0,1801,94237,
#Partially deleted in new
chr4	157076203	157138872	chr4:157076203-157138872	0	+	157078024	157084682	789624	8	94,151,61,107,68,230,83,64,	0,1792,8460,44352,46126,60265,60600,62605,
#Partially deleted in new
chr4	157076402	157170806	chr4:157076402-157170806	1	+	157078024	157170728	789624	10	156,151,107,68,230,83,141,153,293,375,	0,1593,44153,45927,60066,60401,62406,67404,76315,94029,
#Partially deleted in new
chr4	157136364	157138900	chr4:157136364-157138900	0	+	157136364	157136364	8553170	3	334,83,92,	0,439,2444,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	157201561	157201668	chr4:157201561-157201668	3	-	157201561	157201561	8553170	1	107,	0,
#Partially deleted in new
chr4	157204181	157303705	chr4:157204181-157303705	0	+	157204181	157204181	8553170	2	254,154,	0,99370,
#Deleted in new
chr4	157204461	157204855	chr4:157204461-157204855	7	-	157204461	157204461	16724991	1	394,	0,
#Deleted in new
chr4	157219902	157221723	chr4:157219902-157221723	0	+	157221042	157221723	789624	3	242,223,57,	0,1005,1764,
#Partially deleted in new
chr4	157220142	157363684	chr4:157220142-157363684	1	+	157221719	157363044	0	16	224,141,240,197,54,162,168,105,111,207,371,199,248,115,249,250,	0,1524,83409,92536,97515,101295,112676,113106,113867,115528,116234,121121,139753,141395,142656,143292,
#Partially deleted in new
chr4	157220667	157366069	chr4:157220667-157366069	1	+	157221719	157363044	0	16	58,141,240,197,54,162,168,105,111,207,371,199,248,115,249,2635,	0,999,82884,92011,96990,100770,112151,112581,113342,115003,115709,120596,139228,140870,142131,142767,
#Partially deleted in new
chr4	157220690	157303696	chr4:157220690-157303696	0	+	157221042	157303696	789624	4	35,223,141,145,	0,217,976,82861,
#Partially deleted in new
chr4	157220693	157363942	chr4:157220693-157363942	1	+	157221042	157363599	0	16	437,141,240,197,54,162,168,105,111,207,371,199,248,115,135,508,	0,973,82858,91985,96964,100744,112125,112555,113316,114977,115683,120570,139202,140316,142105,142741,
#Partially deleted in new
chr4	157220717	157366075	chr4:157220717-157366075	3	+	157221042	157363044	0	16	413,141,240,197,54,162,168,105,111,207,371,199,248,115,249,2641,	0,949,82834,91961,96940,100720,112101,112531,113292,114953,115659,120546,139178,140820,142081,142717,
#Partially deleted in new
chr4	157220723	157364287	chr4:157220723-157364287	0	+	157220723	157220723	8553170	15	407,141,240,197,54,162,168,105,1868,371,199,248,115,249,853,	0,943,82828,91955,96934,100714,112095,112525,113286,115653,120540,139172,140814,142075,142711,
#Partially deleted in new
chr4	157220763	157363945	chr4:157220763-157363945	1	+	157221042	157363044	0	16	367,141,240,197,54,162,168,105,111,207,371,199,248,115,249,511,	0,903,82788,91915,96894,100674,112055,112485,113246,114907,115613,120500,139132,140246,142035,142671,
#Partially deleted in new
chr4	157220806	157303634	chr4:157220806-157303634	0	+	157221719	157303634	789624	3	205,141,83,	0,860,82745,
#Partially deleted in new
chr4	157221241	157362821	chr4:157221241-157362821	0	+	157221719	157361011	789624	17	301,141,240,197,54,162,168,105,111,207,371,199,248,41,115,115,23,	0,425,82310,91437,96416,100196,111577,112007,112768,114429,115135,120022,138654,139467,139768,140296,141557,
#Partially deleted in new
chr4	157221597	157312786	chr4:157221597-157312786	0	+	157221719	157312786	789624	3	210,240,108,	0,81954,91081,
#Partially deleted in new
chr4	157249463	157317686	chr4:157249463-157317686	0	+	157303703	157317686	789624	5	51,39,240,197,29,	0,351,54088,63215,68194,
#Partially deleted in new
chr4	157341428	157363164	chr4:157341428-157363164	0	+	157341428	157363044	789624	4	34,248,115,366,	0,18467,20109,21370,
#Deleted in new
chr4	157360699	157362934	chr4:157360699-157362934	0	+	157360699	157360699	8553170	2	425,136,	0,2099,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	157572489	157576154	chr4:157572489-157576154	3	+	157572489	157572489	5263520	3	86,52,1257,	0,184,2408,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	157572535	157575824	chr4:157572535-157575824	0	+	157572535	157572535	8553170	2	190,927,	0,2362,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	157572535	157575824	chr4:157572535-157575824	0	+	157572535	157572535	8553170	3	40,52,927,	0,138,2362,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	157637686	157667044	chr4:157637686-157667044	3	+	157637686	157637686	8553170	2	438,374,	0,28984,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	157768012	157768113	chr4:157768012-157768113	3	-	157768012	157768012	8553170	1	101,	0,
#Deleted in new
chr4	157815009	157815480	chr4:157815009-157815480	7	+	157815009	157815009	16724991	1	471,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	157818100	157818572	chr4:157818100-157818572	3	-	157818100	157818100	8553170	1	472,	0,
#Deleted in new
chr4	157945816	157946642	chr4:157945816-157946642	3	-	157945816	157945816	8553170	1	826,	0,
#Partially deleted in new
chr4	157968411	157969615	chr4:157968411-157969615	7	-	157968411	157968411	16724991	2	159,731,	0,473,
#Deleted in new
chr4	158109499	158110153	chr4:158109499-158110153	3	-	158109499	158109499	8553170	1	654,	0,
#Deleted in new
chr4	158111360	158111931	chr4:158111360-158111931	3	-	158111360	158111360	8553170	1	571,	0,
#Partially deleted in new
chr4	158124473	158173050	chr4:158124473-158173050	3	-	158127406	158171375	789624	5	3141,227,215,1134,183,	0,6312,31137,45992,48394,
#Partially deleted in new
chr4	158124603	158172736	chr4:158124603-158172736	1	-	158127406	158171375	789624	5	3011,227,215,1134,398,	0,6182,31007,45862,47735,
#Partially deleted in new
chr4	158124853	158173050	chr4:158124853-158173050	1	-	158127406	158171375	789624	6	2761,227,138,101,1134,183,	0,5932,30757,45393,45612,48014,
#Partially deleted in new
chr4	158127521	158159681	chr4:158127521-158159681	0	-	158127521	158159543	789624	4	93,227,215,166,	0,3264,28089,31994,
#Partially deleted in new
chr4	158127544	158167212	chr4:158127544-158167212	0	-	158127544	158155637	789624	4	70,227,215,36,	0,3241,28066,39632,
#Partially deleted in new
chr4	158130785	158170378	chr4:158130785-158170378	0	-	158130785	158170378	789624	3	227,215,132,	0,24825,39461,
#Partially deleted in new
chr4	158130799	158173023	chr4:158130799-158173023	0	-	158130799	158130799	8553170	3	213,215,156,	0,24811,42068,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	158168353	158173046	chr4:158168353-158173046	1	-	158170379	158171375	789624	2	3246,179,	0,4514,
#Partially deleted in new
chr4	158170751	158202877	chr4:158170751-158202877	3	+	158170751	158170751	789624	6	729,165,75,83,399,1466,	0,1500,8909,28036,28336,30660,
#Partially deleted in new
chr4	158171227	158199451	chr4:158171227-158199451	0	+	158171227	158171227	8553170	3	253,75,364,	0,8433,27860,
#Deleted in new
chr4	158171348	158173318	chr4:158171348-158173318	0	-	158171348	158171375	789624	2	141,446,	0,1524,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	158171372	158200913	chr4:158171372-158200913	1	+	158171372	158171372	8553170	5	108,135,75,83,1826,	0,5539,8288,27415,27715,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	158172576	158179926	chr4:158172576-158179926	0	+	158172576	158172576	8553170	3	364,132,266,	0,4338,7084,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	158176306	158200913	chr4:158176306-158200913	0	+	158176306	158176306	8553170	4	740,75,83,1826,	0,3354,22481,22781,
#Deleted in new
chr4	158182824	158183393	chr4:158182824-158183393	7	+	158182824	158182824	16724991	1	569,	0,
#Partially deleted in new
chr4	158201603	158215313	chr4:158201603-158215313	0	+	158212667	158215313	789624	5	95,66,122,169,123,	0,2039,9849,11004,13587,
#Partially deleted in new
chr4	158201603	158217349	chr4:158201603-158217349	0	+	158212667	158217349	789624	7	95,66,122,160,169,123,29,	0,2039,9849,10457,11004,13587,15717,
#Partially deleted in new
chr4	158201614	158212698	chr4:158201614-158212698	0	+	158212667	158212698	789624	5	84,89,122,160,91,	0,2005,9838,10446,10993,
#Partially deleted in new
chr4	158210193	158235443	chr4:158210193-158235443	0	+	158212667	158235443	789624	8	393,116,169,123,100,81,82,6,	0,1265,2414,4997,7127,9116,22707,25244,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	158210248	158255411	chr4:158210248-158255411	3	+	158212667	158253527	789624	13	338,122,169,123,100,81,82,68,119,120,98,54,1968,	0,1204,2359,4942,7072,9061,22652,25189,27276,30050,31260,34047,43195,
#Partially deleted in new
chr4	158210458	158217349	chr4:158210458-158217349	0	+	158212667	158217349	789624	6	128,122,160,169,123,29,	0,994,1602,2149,4732,6862,
#Partially deleted in new
chr4	158210483	158219390	chr4:158210483-158219390	0	+	158212667	158219390	789624	5	103,169,123,100,81,	0,2124,4707,6837,8826,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	158210484	158214016	chr4:158210484-158214016	1	+	158212667	158212889	789624	3	102,122,1409,	0,968,2123,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	158210484	158234390	chr4:158210484-158234390	1	+	158212667	158232997	789624	6	1736,169,123,100,81,1490,	0,2123,4706,6836,8825,22416,
#Partially deleted in new
chr4	158210485	158217420	chr4:158210485-158217420	0	+	158212667	158217420	789624	5	101,42,169,123,100,	0,1047,2122,4705,6835,
#Deleted in new
chr4	158210485	158211906	chr4:158210485-158211906	0	+	158210485	158210485	8553170	2	101,454,	0,967,
#Deleted in new
chr4	158210485	158212220	chr4:158210485-158212220	0	+	158210485	158210485	8553170	3	101,42,160,	0,1047,1575,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	158210554	158255204	chr4:158210554-158255204	0	+	158212667	158237614	789624	12	32,122,169,123,100,81,82,119,120,98,54,1761,	0,898,2053,4636,6766,8755,22346,26970,29744,30954,33741,42889,
#Partially deleted in new
chr4	158211224	158215313	chr4:158211224-158215313	0	+	158212667	158215313	789624	3	350,169,123,	0,1383,3966,
#Partially deleted in new
chr4	158211265	158217361	chr4:158211265-158217361	0	+	158212667	158217361	789624	5	70,122,169,123,41,	0,187,1342,3925,6055,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	158233035	158255287	chr4:158233035-158255287	0	+	158233035	158233035	8553170	6	2637,119,120,98,54,1844,	0,4489,7263,8473,11260,20408,
#Partially deleted in new
chr4	158237336	158244328	chr4:158237336-158244328	0	+	158237336	158237336	8553170	4	307,120,98,33,	0,2962,4172,6959,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	158270377	158278601	chr4:158270377-158278601	7	+	158270377	158270377	16724991	3	1186,105,1824,	0,1691,6400,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	158271642	158277273	chr4:158271642-158277273	4	+	158271642	158271642	16724991	2	531,496,	0,5135,
#Deleted in new
chr4	158277757	158278676	chr4:158277757-158278676	5	+	158277757	158277757	16724991	1	919,	0,
#Deleted in new
chr4	158469585	158470702	chr4:158469585-158470702	7	+	158469585	158469585	16724991	2	100,552,	0,565,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	158490765	158509908	chr4:158490765-158509908	3	-	158490765	158490765	8553170	3	130,131,398,	0,4160,18745,
#Partially deleted in new
chr4	158521713	158653367	chr4:158521713-158653367	1	+	158521976	158652055	789624	18	312,138,99,187,72,72,72,72,75,72,72,72,72,72,230,411,219,1611,	0,50984,71687,77531,83354,86258,90416,90577,95417,105106,106924,111691,116294,117546,123195,125077,126785,130043,
#Partially deleted in new
chr4	158521713	158653367	chr4:158521713-158653367	1	+	158607063	158652055	789624	18	312,138,99,106,72,84,72,72,72,75,72,72,72,72,230,411,219,1611,	0,50984,71687,77612,83354,85334,86258,90416,90577,95417,106924,111691,116294,117546,123195,125077,126785,130043,
#Partially deleted in new
chr4	158521713	158653367	chr4:158521713-158653367	1	+	158599429	158652055	789624	17	312,162,106,72,72,72,72,75,72,72,72,72,69,230,411,219,1611,	0,50984,77612,83354,86258,90416,90577,95417,105106,106924,111691,116294,117549,123195,125077,126785,130043,
#Partially deleted in new
chr4	158521725	158653372	chr4:158521725-158653372	3	+	158521976	158652055	0	18	300,138,99,106,72,72,72,72,75,72,72,72,72,72,230,411,219,1616,	0,50972,71675,77600,83342,86246,90404,90565,95405,105094,106912,111679,116282,117534,123183,125065,126773,130031,
#Partially deleted in new
chr4	158521725	158544168	chr4:158521725-158544168	0	+	158521725	158521725	8553170	2	300,451,	0,21992,
#Partially deleted in new
chr4	158521975	158653372	chr4:158521975-158653372	0	+	158521976	158607057	789624	19	50,138,99,106,72,84,72,72,72,75,72,72,72,72,72,230,411,219,1616,	0,50722,71425,77350,83092,85072,85996,90154,90315,95155,104844,106662,111429,116032,117284,122933,124815,126523,129781,
#Partially deleted in new
chr4	158521976	158652055	chr4:158521976-158652055	1	+	158521976	158652055	0	16	49,138,99,106,72,72,72,72,75,72,72,72,230,411,219,299,	0,50721,71424,77349,83091,85995,90153,90314,95154,104843,106661,117283,122932,124814,126522,129780,
#Partially deleted in new
chr4	158521976	158652055	chr4:158521976-158652055	1	+	158521976	158652055	0	17	49,138,106,72,72,72,72,75,72,72,72,72,72,230,411,219,299,	0,50721,77349,83091,85995,90153,90314,95154,104843,106661,111428,116031,117283,122932,124814,126522,129780,
#Partially deleted in new
chr4	158521976	158646679	chr4:158521976-158646679	0	+	158521976	158610666	0	17	49,138,99,106,72,72,53,72,72,75,72,72,72,72,72,230,377,	0,50721,71424,77349,83091,85995,88656,90153,90314,95154,104843,106661,111428,116031,117283,122932,124326,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	158544231	158573091	chr4:158544231-158573091	0	+	158544231	158544231	8553170	2	175,394,	0,28466,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	158666678	158672046	chr4:158666678-158672046	3	-	158669612	158671801	789624	2	3090,431,	0,4937,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	158666683	158671892	chr4:158666683-158671892	1	-	158669752	158671801	789624	2	3081,277,	0,4932,
#Partially deleted in new
chr4	158668924	158672255	chr4:158668924-158672255	0	-	158668924	158668924	8553170	2	844,259,	0,3072,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	158672124	158709623	chr4:158672124-158709623	3	+	158672456	158708527	789624	13	366,141,230,82,119,78,147,141,144,169,183,222,1260,	0,8342,10070,12467,12976,18223,23372,25434,26862,31298,34064,34504,36239,
#Partially deleted in new
chr4	158672124	158680607	chr4:158672124-158680607	0	+	158672456	158680607	789624	2	366,80,	0,8403,
#Partially deleted in new
chr4	158672306	158699002	chr4:158672306-158699002	0	+	158685108	158699002	789624	7	184,82,119,78,147,141,16,	0,12285,12794,18041,23190,25252,26680,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	158672315	158680101	chr4:158672315-158680101	0	+	158672315	158672315	8553170	2	175,812,	0,6974,
#Partially deleted in new
chr4	158672338	158708599	chr4:158672338-158708599	1	+	158672456	158708527	789624	12	152,230,82,119,78,147,141,144,169,183,222,236,	0,9856,12253,12762,18009,23158,25220,26648,31084,33850,34290,36025,
#Partially deleted in new
chr4	158672404	158708568	chr4:158672404-158708568	0	+	158672404	158672404	8553170	5	86,169,183,222,205,	0,31018,33784,34224,35959,
#Partially deleted in new
chr4	158681941	158684775	chr4:158681941-158684775	0	+	158681941	158681941	8553170	2	483,184,	0,2650,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	158700690	158700909	chr4:158700690-158700909	3	+	158700690	158700690	8553170	1	219,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	158709133	158723396	chr4:158709133-158723396	3	-	158709735	158723288	789624	10	691,43,87,142,107,123,189,107,141,193,	0,1494,1628,3985,6163,6428,7878,10046,12209,14070,
#Partially deleted in new
chr4	158709760	158717055	chr4:158709760-158717055	0	-	158715653	158717055	789624	7	64,43,87,142,107,107,44,	0,867,1001,3358,5536,5801,7251,
#Deleted in new
chr4	158709941	158710821	chr4:158709941-158710821	0	-	158710583	158710821	789624	2	729,60,	0,820,
#Partially deleted in new
chr4	158769137	158908049	chr4:158769137-158908049	3	+	158769212	158904544	789624	17	182,127,147,101,72,101,72,130,202,89,147,170,1327,157,201,116,3584,	0,56778,59941,62723,62929,64390,66267,82183,89919,90440,92204,92469,98964,101175,122308,126612,135328,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	158769193	158836658	chr4:158769193-158836658	0	+	158769193	158769193	8553170	6	126,127,147,101,72,3131,	0,56722,59885,62667,62873,64334,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	158794589	158794696	chr4:158794589-158794696	3	-	158794589	158794589	8553170	1	107,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	158795853	158829142	chr4:158795853-158829142	0	+	158795853	158795853	8553170	4	171,122,127,64,	0,12736,30062,33225,
#Partially deleted in new
chr4	158806093	158868586	chr4:158806093-158868586	0	+	158806247	158868586	789624	13	330,127,147,101,72,101,72,130,202,89,147,170,485,	0,19822,22985,25767,25973,27434,29311,45227,52963,53484,55248,55513,62008,
#Partially deleted in new
chr4	158832079	158859647	chr4:158832079-158859647	0	+	158832079	158859647	789624	7	59,101,90,72,130,202,70,	0,1448,1721,3325,19241,26977,27498,
#Partially deleted in new
chr4	158870358	158890188	chr4:158870358-158890188	0	+	158870358	158870358	8553170	2	111,362,	0,19468,
#Partially deleted in new
chr4	158893133	159035181	chr4:158893133-159035181	3	-	158893702	159035096	789624	5	584,190,59,233,149,	0,22036,67152,79945,141899,
#Partially deleted in new
chr4	158893543	159038760	chr4:158893543-159038760	0	-	158893543	158893543	8553170	4	174,190,233,159,	0,21626,79535,145058,
#Deleted in new
chr4	158909372	158909450	chr4:158909372-158909450	3	-	158909372	158909372	8553170	1	78,	0,
#Partially deleted in new
chr4	158915179	158973131	chr4:158915179-158973131	0	-	158915179	158915179	8553170	3	180,64,53,	0,22304,57899,
#Partially deleted in new
chr4	159007118	159007835	chr4:159007118-159007835	7	+	159007118	159007118	16724991	1	717,	0,
#Partially deleted in new
chr4	159026138	159026527	chr4:159026138-159026527	7	+	159026138	159026138	16724991	1	389,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	159064296	159064398	chr4:159064296-159064398	3	-	159064296	159064296	8553170	1	102,	0,
#Partially deleted in new
chr4	159103012	159360174	chr4:159103012-159360174	1	+	159104162	159358139	789624	30	1219,71,57,84,76,168,132,178,137,159,153,165,108,204,109,247,158,241,384,212,124,24,224,210,153,75,226,560,306,2061,	0,83629,90187,107487,135796,138188,201329,211578,219334,220446,226845,227321,228418,228617,228913,229438,235298,236101,238551,239966,240268,241023,242093,243776,247124,248046,249672,250474,252840,255101,
#Partially deleted in new
chr4	159104177	159314768	chr4:159104177-159314768	0	+	159104177	159314768	789624	9	54,71,57,84,76,168,18,132,178,	0,82464,89022,106322,134631,137023,139596,200164,210413,
#Deleted in new
chr4	159128801	159128894	chr4:159128801-159128894	3	-	159128801	159128801	5263520	1	93,	0,
#Deleted in new
chr4	159128804	159128891	chr4:159128804-159128891	3	+	159128804	159128804	5263520	1	87,	0,
#Partially deleted in new
chr4	159228253	159322363	chr4:159228253-159322363	0	+	159228253	159228253	8553170	7	104,76,168,18,132,178,17,	0,10555,12947,15520,76088,86337,94093,
#Partially deleted in new
chr4	159229336	159241363	chr4:159229336-159241363	0	+	159229336	159229336	8553170	3	194,76,163,	0,9472,11864,
#Partially deleted in new
chr4	159241022	159360174	chr4:159241022-159360174	3	+	159241101	159358139	789624	25	100,168,132,178,137,159,153,165,108,204,109,247,158,241,384,212,124,224,210,153,75,226,560,306,2061,	0,178,63319,73568,81324,82436,88835,89311,90408,90607,90903,91428,97288,98091,100541,101956,102258,104083,105766,109114,110036,111662,112464,114830,117091,
#Partially deleted in new
chr4	159266880	159323515	chr4:159266880-159323515	0	+	159314614	159323515	789624	5	78,132,178,137,57,	0,37461,47710,55466,56578,
#Partially deleted in new
chr4	159267160	159322449	chr4:159267160-159322449	0	+	159267255	159322449	789624	4	149,132,178,103,	0,37181,47430,55186,
#Partially deleted in new
chr4	159267736	159360169	chr4:159267736-159360169	1	+	159268155	159358139	789624	24	479,132,178,137,159,153,165,108,204,109,247,158,241,384,212,124,24,224,210,153,226,560,306,2056,	0,36605,46854,54610,55722,62121,62597,63694,63893,64189,64714,70574,71377,73827,75242,75544,76299,77369,79052,82400,84948,85750,88116,90377,
#Partially deleted in new
chr4	159282503	159323470	chr4:159282503-159323470	0	+	159282637	159323470	789624	5	137,132,178,137,12,	0,21838,32087,39843,40955,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	159326660	159330653	chr4:159326660-159330653	0	+	159326660	159326660	8553170	2	3350,320,	0,3673,
#Deleted in new
chr4	159331625	159332856	chr4:159331625-159332856	0	+	159331625	159332701	789624	3	208,109,406,	0,300,825,
#Deleted in new
chr4	159343293	159346998	chr4:159343293-159346998	0	+	159343293	159346998	789624	3	111,224,210,	0,1812,3495,
#Partially deleted in new
chr4	159345215	159353504	chr4:159345215-159353504	0	+	159345215	159353504	789624	6	114,210,153,75,226,18,	0,1573,4921,5843,7469,8271,
#Partially deleted in new
chr4	159350227	159354045	chr4:159350227-159354045	0	+	159350227	159354045	789624	4	62,123,226,559,	0,831,2457,3259,
#Deleted in new
chr4	159352456	159353569	chr4:159352456-159353569	0	+	159352456	159352456	8553170	2	454,83,	0,1030,
#Deleted in new
chr4	159375098	159375322	chr4:159375098-159375322	7	-	159375098	159375098	16724991	1	224,	0,
#Partially deleted in new
chr4	159398532	159401246	chr4:159398532-159401246	3	+	159398532	159398532	8553170	2	96,469,	0,2245,
#Partially deleted in new
chr4	159666502	159777784	chr4:159666502-159777784	3	-	159666502	159666502	789624	3	156,87,115,	0,79219,111167,
#Deleted in new
chr4	160521828	160522311	chr4:160521828-160522311	7	-	160521828	160521828	16724991	1	483,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	160539253	160586817	chr4:160539253-160586817	3	+	160539253	160539253	8553170	5	587,58,113,87,572,	0,2737,6115,14791,46992,
#Deleted in new
chr4	160818421	160818869	chr4:160818421-160818869	7	+	160818421	160818421	16724991	1	448,	0,
#Partially deleted in new
chr4	161378952	161388417	chr4:161378952-161388417	3	+	161378952	161378952	8553170	2	253,2587,	0,6878,
#Partially deleted in new
chr4	161383896	162164035	chr4:161383896-162164035	3	-	161385746	162111396	789624	16	2553,125,108,150,119,27,135,162,121,167,121,197,249,34,142,421,	0,71107,75315,97123,116119,126501,154269,158635,203558,272431,375514,391981,536507,649728,727374,779718,
#Partially deleted in new
chr4	161383898	162163966	chr4:161383898-162163966	1	-	161385746	162111396	789624	16	2551,125,108,150,119,27,135,162,121,167,121,197,249,31,142,352,	0,71105,75313,97121,116117,126499,154267,158633,203556,272429,375512,391979,536505,649726,727372,779716,
#Partially deleted in new
chr4	161385746	162164004	chr4:161385746-162164004	1	-	161385746	162111396	789624	15	703,125,108,150,119,135,162,121,167,121,197,249,31,142,390,	0,69257,73465,95273,114269,152419,156785,201708,270581,373664,390131,534657,647878,725524,777868,
#Partially deleted in new
chr4	161495135	161500074	chr4:161495135-161500074	0	-	161495135	161495135	8553170	2	345,59,	0,4880,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	162022732	162047567	chr4:162022732-162047567	3	+	162022732	162022732	789624	6	177,176,190,238,129,195,	0,9845,12477,19121,20450,24640,
#Partially deleted in new
chr4	162322187	162323907	chr4:162322187-162323907	7	+	162322187	162322187	16724991	3	107,373,545,	0,680,1175,
#Partially deleted in new
chr4	162521681	162522041	chr4:162521681-162522041	7	+	162521681	162521681	16724991	2	297,39,	0,321,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	162740667	162742048	chr4:162740667-162742048	3	+	162740667	162740667	8553170	2	248,380,	0,1001,
#Partially deleted in new
chr4	162984794	162985416	chr4:162984794-162985416	7	+	162984794	162984794	16724991	1	622,	0,
#Partially deleted in new
chr4	163108784	163119965	chr4:163108784-163119965	3	+	163108784	163108784	8553170	3	123,73,581,	0,8650,10600,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	163110072	163140337	chr4:163110072-163140337	1	-	163110275	163140284	789624	3	218,52,115,	0,27126,30150,
#Partially deleted in new
chr4	163117450	163119780	chr4:163117450-163119780	0	+	163117450	163117450	8553170	2	57,377,	0,1953,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	163126707	163166890	chr4:163126707-163166890	1	-	163126978	163166727	0	8	408,103,52,161,83,94,175,528,	0,6446,10491,13515,19074,21633,37509,39655,
#Partially deleted in new
chr4	163128668	163166921	chr4:163128668-163166921	3	-	163128896	163166727	0	8	680,103,52,161,83,94,175,559,	0,4485,8530,11554,17113,19672,35548,37694,
#Partially deleted in new
chr4	163129119	163133642	chr4:163129119-163133642	0	-	163129119	163129119	8553170	2	229,489,	0,4034,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	163135025	163166831	chr4:163135025-163166831	0	-	163135025	163135025	8553170	7	1295,52,161,83,94,175,469,	0,2173,5197,10756,13315,29191,31337,
#Partially deleted in new
chr4	163156963	163166752	chr4:163156963-163166752	0	-	163156963	163156963	8553170	4	491,103,175,390,	0,1261,7253,9399,
#Deleted in new
chr4	163265574	163266583	chr4:163265574-163266583	7	-	163265574	163265574	16724991	1	1009,	0,
#Partially deleted in new
chr4	163323960	163332862	chr4:163323960-163332862	3	-	163325302	163326554	0	3	1798,850,381,	0,1895,8521,
#Partially deleted in new
chr4	163324973	163332596	chr4:163324973-163332596	1	-	163325302	163325728	789624	4	785,76,41,115,	0,882,1691,7508,
#Partially deleted in new
chr4	163325535	163332596	chr4:163325535-163332596	0	-	163325535	163325728	789624	5	223,76,81,41,115,	0,320,682,1129,6946,
#Partially deleted in new
chr4	163325625	163332596	chr4:163325625-163332596	0	-	163325625	163326020	789624	4	133,279,41,115,	0,230,1039,6856,
#Partially deleted in new
chr4	163326369	163333018	chr4:163326369-163333018	0	-	163326369	163326554	789624	2	336,223,	0,6426,
#Partially deleted in new
chr4	163326373	163331166	chr4:163326373-163331166	0	-	163326373	163326554	789624	2	332,467,	0,4326,
#Partially deleted in new
chr4	163326480	163344832	chr4:163326480-163344832	0	-	163326480	163326554	789624	2	225,528,	0,17824,
#Partially deleted in new
chr4	163343938	163351934	chr4:163343938-163351934	3	+	163350273	163351611	0	4	62,40,71,1670,	0,1775,3513,6326,
#Partially deleted in new
chr4	163344101	163351934	chr4:163344101-163351934	1	+	163350273	163351611	0	4	1402,40,71,1670,	0,1612,3350,6163,
#Deleted in new
chr4	163350218	163351636	chr4:163350218-163351636	1	+	163350273	163351611	0	1	1418,	0,
#Deleted in new
chr4	163382178	163382516	chr4:163382178-163382516	7	+	163382178	163382178	16724991	1	338,	0,
#Deleted in new
chr4	163471092	163473746	chr4:163471092-163473746	3	-	163471853	163473734	789624	1	2654,	0,
#Partially deleted in new
chr4	163494441	163519720	chr4:163494441-163519720	0	+	163494441	163519514	789624	7	118,113,38,85,149,43,387,	0,12591,18380,19632,20871,22992,24892,
#Partially deleted in new
chr4	163494460	163520539	chr4:163494460-163520539	3	+	163494801	163519514	789624	7	344,113,38,85,149,43,1206,	0,12572,18361,19613,20852,22973,24873,
#Partially deleted in new
chr4	163494666	163519719	chr4:163494666-163519719	1	+	163494801	163517461	789624	6	138,113,38,85,43,386,	0,12366,18155,19407,22767,24667,
#Partially deleted in new
chr4	163494667	163516102	chr4:163494667-163516102	0	+	163494667	163494667	8553170	5	169,113,38,85,790,	0,12365,18154,19406,20645,
#Partially deleted in new
chr4	163494667	163515461	chr4:163494667-163515461	0	+	163494667	163494667	8553170	5	169,113,38,85,149,	0,12365,18154,19406,20645,
#Partially deleted in new
chr4	163494687	163520375	chr4:163494687-163520375	1	+	163494801	163520048	789624	5	117,113,38,85,394,	0,12345,18134,19386,25294,
#Partially deleted in new
chr4	163494707	163517559	chr4:163494707-163517559	1	+	163494801	163517480	789624	6	97,113,38,85,149,126,	0,12325,18114,19366,20605,22726,
#Partially deleted in new
chr4	163512423	163519463	chr4:163512423-163519463	0	+	163512423	163512423	8553170	5	436,85,149,43,130,	0,1650,2889,5010,6910,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	163517071	163519558	chr4:163517071-163519558	0	+	163517071	163517071	8553170	2	405,225,	0,2262,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	163524297	163854178	chr4:163524297-163854178	1	-	163528747	163854131	789624	6	4749,148,181,80,51,158,	0,21298,61451,89016,176515,329723,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	163524717	164384050	chr4:163524717-164384050	3	-	163528747	163854131	789624	8	4329,148,181,80,51,149,75,864,	0,20878,61031,88596,176095,329303,586870,858469,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	163526970	164384035	chr4:163526970-164384035	1	-	163528747	163854131	789624	10	2076,148,181,768,80,51,149,209,75,166,	0,18625,58778,85300,86343,173842,327050,461530,584617,856899,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	163527120	163613534	chr4:163527120-163613534	1	-	163528747	163613504	789624	4	1926,148,181,221,	0,18475,58628,86193,
#Partially deleted in new
chr4	163528649	163613513	chr4:163528649-163613513	0	-	163555910	163613504	789624	5	397,148,125,181,200,	0,16946,27199,57099,84664,
#Deleted in new
chr4	163529770	163530697	chr4:163529770-163530697	3	+	163529770	163529770	8553170	1	927,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	163583652	163612905	chr4:163583652-163612905	0	-	163583652	163583652	8553170	2	2277,635,	0,28618,
#Partially deleted in new
chr4	163585591	163613533	chr4:163585591-163613533	0	-	163585591	163585591	8553170	2	338,220,	0,27722,
#Partially deleted in new
chr4	163585748	164383989	chr4:163585748-164383989	0	-	163585748	163854131	789624	6	181,80,51,149,75,120,	0,27565,115064,268272,525839,798121,
#Deleted in new
chr4	163612681	163613510	chr4:163612681-163613510	0	-	163612681	163612681	8553170	2	357,197,	0,632,
#Partially deleted in new
chr4	163613366	163988921	chr4:163613366-163988921	0	-	163613366	163613366	8553170	3	27,51,421,	0,87446,375134,
#Deleted in new
chr4	163828799	163829113	chr4:163828799-163829113	3	-	163828799	163828799	8553170	1	314,	0,
#Partially deleted in new
chr4	163932525	163933182	chr4:163932525-163933182	7	+	163932525	163932525	16724991	1	657,	0,
#Partially deleted in new
chr4	163988542	164383517	chr4:163988542-164383517	0	-	163988542	163988542	8553170	4	167,75,84,331,	0,123045,246290,394644,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	163988545	164383953	chr4:163988545-164383953	0	-	163988545	163988545	8553170	4	164,75,227,84,	0,123042,341384,395324,
#Partially deleted in new
chr4	163988580	164383566	chr4:163988580-164383566	0	-	163988580	163988580	8553170	3	129,75,380,	0,123007,394606,
#Deleted in new
chr4	164188310	164190367	chr4:164188310-164190367	7	+	164188310	164188310	16724991	1	2057,	0,
#Deleted in new
chr4	164197006	164197711	chr4:164197006-164197711	7	-	164197006	164197006	16724991	1	705,	0,
#Partially deleted in new
chr4	164597718	164597976	chr4:164597718-164597976	7	+	164597718	164597718	16724991	1	258,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	164620731	164620837	chr4:164620731-164620837	3	+	164620731	164620731	8553170	1	106,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	164725309	164726706	chr4:164725309-164726706	7	+	164725309	164725309	16724991	1	1397,	0,
#Partially deleted in new
chr4	164754063	164801454	chr4:164754063-164801454	1	+	164770443	164801194	789624	4	112,101,137,364,	0,247,16355,47027,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	164754130	164803795	chr4:164754130-164803795	3	+	164770443	164801194	789624	3	281,137,2705,	0,16288,46960,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	164787289	164787396	chr4:164787289-164787396	3	+	164787289	164787289	8553170	1	107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	164877003	164897523	chr4:164877003-164897523	3	+	164877331	164879008	789624	3	404,90,2108,	0,1916,18412,
#Deleted in new
chr4	164877193	164879256	chr4:164877193-164879256	1	+	164877331	164879008	789624	2	214,337,	0,1726,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	164877241	164898965	chr4:164877241-164898965	0	+	164877331	164879008	789624	4	166,90,178,240,	0,1678,19566,21484,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	164895521	164898934	chr4:164895521-164898934	0	+	164895521	164895521	8553170	4	45,121,178,209,	0,597,1286,3204,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	164896463	164898965	chr4:164896463-164898965	0	+	164896463	164896463	8553170	2	522,240,	0,2262,
#Deleted in new
chr4	164915564	164916983	chr4:164915564-164916983	7	+	164915564	164915564	16724991	1	1419,	0,
#Deleted in new
chr4	164920617	164921063	chr4:164920617-164921063	7	-	164920617	164920617	16724991	1	446,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	164920893	164931047	chr4:164920893-164931047	3	+	164920893	164920893	8553170	2	2102,1598,	0,8556,
#Deleted in new
chr4	164929493	164929951	chr4:164929493-164929951	7	-	164929493	164929493	16724991	1	458,	0,
#Deleted in new
chr4	164933085	164933506	chr4:164933085-164933506	7	-	164933085	164933085	16724991	1	421,	0,
#Partially deleted in new
chr4	164938321	164939990	chr4:164938321-164939990	7	-	164938321	164938321	16724991	2	658,688,	0,981,
#Partially deleted in new
chr4	164943289	164943937	chr4:164943289-164943937	7	+	164943289	164943289	16724991	1	648,	0,
#Deleted in new
chr4	164948078	164949438	chr4:164948078-164949438	7	+	164948078	164948078	16724991	1	1360,	0,
#Deleted in new
chr4	164956947	164959121	chr4:164956947-164959121	3	+	164957022	164957496	789624	1	2174,	0,
#Deleted in new
chr4	164956947	164959122	chr4:164956947-164959122	0	+	164956947	164956947	8553170	1	2175,	0,
#Deleted in new
chr4	164968586	164970002	chr4:164968586-164970002	7	-	164968586	164968586	16724991	1	1416,	0,
#Partially deleted in new
chr4	164987264	164987787	chr4:164987264-164987787	7	+	164987264	164987264	16724991	1	523,	0,
#Deleted in new
chr4	165007085	165007959	chr4:165007085-165007959	3	-	165007085	165007085	8553170	2	130,617,	0,257,
#Deleted in new
chr4	165010458	165011851	chr4:165010458-165011851	7	+	165010458	165010458	16724991	1	1393,	0,
#Deleted in new
chr4	165012365	165012845	chr4:165012365-165012845	7	-	165012365	165012365	16724991	1	480,	0,
#Partially deleted in new
chr4	165016457	165041744	chr4:165016457-165041744	3	+	165040072	165041488	8553170	4	858,116,52,1676,	0,11834,22743,23611,
#Deleted in new
chr4	165016886	165017433	chr4:165016886-165017433	7	+	165016886	165016886	16724991	1	547,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	165026260	165026944	chr4:165026260-165026944	7	-	165026260	165026260	16724991	1	684,	0,
#Partially deleted in new
chr4	165031952	165041744	chr4:165031952-165041744	1	+	165040072	165041488	789624	3	160,52,1676,	0,7248,8116,
#Partially deleted in new
chr4	165031999	165040344	chr4:165031999-165040344	0	+	165040072	165040344	789624	2	113,276,	0,8069,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	165039197	165041513	chr4:165039197-165041513	1	+	165040072	165041488	789624	3	55,174,1445,	0,244,871,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	165039424	165041744	chr4:165039424-165041744	1	+	165040072	165041488	789624	2	191,1676,	0,644,
#Deleted in new
chr4	165045968	165046280	chr4:165045968-165046280	7	+	165045968	165045968	16724991	1	312,	0,
#Partially deleted in new
chr4	165053863	165060554	chr4:165053863-165060554	3	+	165059147	165060554	789624	2	85,1755,	0,4936,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	165070607	165112919	chr4:165070607-165112919	3	-	165079657	165112773	789624	6	9189,103,135,265,147,173,	0,14978,17860,30020,32342,42139,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	165078419	165208549	chr4:165078419-165208549	1	-	165079657	165182556	789624	7	1377,103,135,265,147,87,111,	0,7166,10048,22208,24530,104122,130019,
#Partially deleted in new
chr4	165085585	165112854	chr4:165085585-165112854	0	-	165085585	165100643	789624	6	103,135,265,147,31,108,	0,2882,15042,17364,26063,27161,
#Partially deleted in new
chr4	165207617	165323153	chr4:165207617-165323153	3	+	165207876	165322060	0	15	285,126,107,122,163,110,117,150,118,198,102,129,141,144,1122,	0,12316,21189,31160,55579,86741,89991,91889,97990,102935,103846,105620,106408,110208,114414,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	165207822	165238831	chr4:165207822-165238831	0	+	165207876	165238831	789624	5	80,126,120,107,54,	0,12111,16115,20984,30955,
#Partially deleted in new
chr4	165209399	165263281	chr4:165209399-165263281	0	+	165220021	165263281	789624	6	63,79,126,107,122,85,	0,10244,10534,19407,29378,53797,
#Partially deleted in new
chr4	165209892	165322458	chr4:165209892-165322458	1	+	165210142	165322060	0	15	288,126,107,122,163,110,117,150,118,198,102,129,141,144,427,	0,10041,18914,28885,53304,84466,87716,89614,95715,100660,101571,103345,104133,107933,112139,
#Partially deleted in new
chr4	165210018	165323156	chr4:165210018-165323156	1	+	165238782	165322060	0	14	162,126,122,163,110,117,150,118,198,102,129,141,144,1125,	0,9915,28759,53178,84340,87590,89488,95589,100534,101445,103219,104007,107807,112013,
#Partially deleted in new
chr4	165210035	165323153	chr4:165210035-165323153	0	+	165210142	165238781	789624	14	145,126,122,163,110,117,150,118,198,102,129,141,144,1122,	0,9898,28742,53161,84323,87573,89471,95572,100517,101428,103202,103990,107790,111996,
#Partially deleted in new
chr4	165220000	165322945	chr4:165220000-165322945	1	+	165228823	165322060	789624	13	59,107,163,110,117,150,118,198,102,129,141,144,914,	0,8806,43196,74358,77608,79506,85607,90552,91463,93237,94025,97825,102031,
#Partially deleted in new
chr4	165238775	165310752	chr4:165238775-165310752	0	+	165238775	165238775	8553170	6	124,110,117,150,118,200,	0,55583,58833,60731,66832,71777,
#Partially deleted in new
chr4	165240347	165322711	chr4:165240347-165322711	1	+	165263313	165322060	789624	12	117,163,110,117,150,118,198,102,129,141,144,680,	0,22849,54011,57261,59159,65260,70205,71116,72890,73678,77478,81684,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	165252579	165252661	chr4:165252579-165252661	3	+	165252579	165252579	8553170	1	82,	0,
#Deleted in new
chr4	165277811	165279679	chr4:165277811-165279679	3	-	165277983	165279645	789624	1	1868,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	165327622	165343160	chr4:165327622-165343160	3	+	165333370	165341946	789624	6	142,286,149,127,155,1410,	0,5717,10166,11029,12598,14128,
#Partially deleted in new
chr4	165327666	165340351	chr4:165327666-165340351	0	+	165333370	165340351	789624	5	280,286,149,127,131,	0,5673,10122,10985,12554,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	165327685	165343029	chr4:165327685-165343029	1	+	165337926	165341946	789624	5	79,149,127,155,1279,	0,10103,10966,12535,14065,
#Partially deleted in new
chr4	165327720	165340640	chr4:165327720-165340640	1	+	165333370	165340379	789624	5	44,286,149,127,420,	0,5619,10068,10931,12500,
#Partially deleted in new
chr4	165327926	165333625	chr4:165327926-165333625	0	+	165333370	165333625	789624	2	196,286,	0,5413,
#Partially deleted in new
chr4	165361193	165482322	chr4:165361193-165482322	0	+	165464418	165482322	789624	4	118,197,168,81,	0,103196,106494,121048,
#Partially deleted in new
chr4	165378941	165498320	chr4:165378941-165498320	3	+	165379221	165497610	789624	9	587,197,168,118,183,140,100,119,809,	0,85448,88746,103300,105480,108496,114229,116617,118570,
#Partially deleted in new
chr4	165379285	165381474	chr4:165379285-165381474	0	+	165379285	165381363	789624	2	243,194,	0,1995,
#Partially deleted in new
chr4	165386241	165386337	chr4:165386241-165386337	3	+	165386241	165386241	5263520	1	96,	0,
#Deleted in new
chr4	165404066	165406350	chr4:165404066-165406350	7	-	165404066	165404066	16724991	1	2284,	0,
#Partially deleted in new
chr4	165415084	165482347	chr4:165415084-165482347	0	+	165464418	165482347	789624	4	162,197,168,106,	0,49305,52603,67157,
#Partially deleted in new
chr4	165418225	165484438	chr4:165418225-165484438	0	+	165464418	165484438	789624	5	63,197,168,118,17,	0,46164,49462,64016,66196,
#Deleted in new
chr4	165517254	165517501	chr4:165517254-165517501	7	-	165517254	165517254	16724991	1	247,	0,
#Deleted in new
chr4	165547531	165551060	chr4:165547531-165551060	7	-	165547531	165547531	16724991	1	3529,	0,
#Partially deleted in new
chr4	165664349	165665671	chr4:165664349-165665671	7	+	165664349	165664349	16724991	3	202,325,518,	0,342,804,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	165684638	165762778	chr4:165684638-165762778	3	+	165684638	165684638	789624	6	115,83,170,86,186,1523,	0,1145,7537,48456,70162,76617,
#Partially deleted in new
chr4	165873257	166103895	chr4:165873257-166103895	3	+	165873904	166100876	0	21	816,111,81,153,118,179,106,125,116,103,117,146,196,126,161,181,126,128,214,251,3154,	0,116123,119546,121123,121803,130133,134685,141178,152058,166081,168769,170016,181818,183926,186770,192425,201620,204645,217870,226019,227484,
#Partially deleted in new
chr4	165873347	166102026	chr4:165873347-166102026	1	+	165873904	166100876	789624	22	726,111,81,153,118,179,106,125,116,103,117,146,69,196,126,161,181,126,128,214,251,1285,	0,116033,119456,121033,121713,130043,134595,141088,151968,165991,168679,169926,171017,181728,183836,186680,192335,201530,204555,217780,225929,227394,
#Partially deleted in new
chr4	165873347	166102026	chr4:165873347-166102026	0	+	165873904	165992916	789624	21	726,111,119,153,118,179,106,125,116,103,117,146,196,126,161,181,126,128,214,251,1285,	0,116033,119456,121033,121713,130043,134595,141088,151968,165991,168679,169926,181728,183836,186680,192335,201530,204555,217780,225929,227394,
#Partially deleted in new
chr4	165873685	165992884	chr4:165873685-165992884	0	+	165873904	165919838	789624	4	388,106,111,81,	0,46148,115695,119118,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	165873739	166030958	chr4:165873739-166030958	1	+	165873904	166030473	0	10	334,111,81,153,118,179,106,125,116,506,	0,115641,119064,120641,121321,129651,134203,140696,151576,156713,
#Partially deleted in new
chr4	165874957	165995178	chr4:165874957-165995178	0	+	165992823	165995178	789624	5	95,111,81,153,118,	0,114423,117846,119423,120103,
#Deleted in new
chr4	166053186	166053287	chr4:166053186-166053287	7	-	166053186	166053186	16724991	1	101,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	166312934	166313034	chr4:166312934-166313034	3	-	166312934	166312934	8553170	1	100,	0,
#Duplicated in new
chr4	166388700	166526119	chr4:166388700-166526119	3	-	166388700	166388700	8553170	4	729,53,117,35,	0,120857,134205,137384,
#Partially deleted in new
chr4	166733383	167234587	chr4:166733383-167234587	1	-	166734920	167234173	789624	12	1707,138,63,222,120,115,124,115,46,9,189,138,	0,4083,8613,21124,58786,155746,179236,266965,329108,349854,500601,501066,
#Partially deleted in new
chr4	166733383	167234590	chr4:166733383-167234590	1	-	166734920	167119838	789624	12	1707,138,63,222,120,115,124,115,46,81,189,141,	0,4083,8613,21124,58786,155746,179236,266965,329108,386410,500601,501066,
#Partially deleted in new
chr4	166733383	167234426	chr4:166733383-167234426	1	-	166734920	166912742	789624	10	1707,138,63,222,120,115,124,46,189,73,	0,4083,8613,21124,58786,155746,179236,329108,500601,500970,
#Partially deleted in new
chr4	166733386	167234549	chr4:166733386-167234549	1	-	166734920	167234173	789624	11	1704,138,63,222,120,115,124,115,46,189,100,	0,4080,8610,21121,58783,155743,179233,266962,329105,500598,501063,
#Partially deleted in new
chr4	166733386	167234757	chr4:166733386-167234757	3	-	166734920	167234173	789624	11	1704,138,63,222,120,115,124,115,46,189,64,	0,4080,8610,21121,58783,155743,179233,266962,329105,500598,501307,
#Partially deleted in new
chr4	166733387	167234796	chr4:166733387-167234796	1	-	166734920	167234173	789624	12	1703,138,63,222,120,115,124,115,46,9,189,103,	0,4079,8609,21120,58782,155742,179232,266961,329104,349850,500597,501306,
#Partially deleted in new
chr4	166733387	167234757	chr4:166733387-167234757	1	-	166734920	167234173	789624	12	1703,138,63,222,120,115,124,115,46,9,189,64,	0,4079,8609,21120,58782,155742,179232,266961,329104,329254,500597,501306,
#Partially deleted in new
chr4	166734146	167102557	chr4:166734146-167102557	1	-	166734920	167000431	789624	10	944,138,63,222,120,115,124,115,46,120,	0,3320,7850,20361,58023,154983,178473,266202,328345,368291,
#Partially deleted in new
chr4	166734184	167234582	chr4:166734184-167234582	1	-	166734920	167234173	789624	12	906,138,63,222,120,115,124,115,46,9,189,133,	0,3282,7812,20323,57985,154945,178435,266164,328307,328457,499800,500265,
#Partially deleted in new
chr4	166734184	167234494	chr4:166734184-167234494	1	-	166734920	167234173	789624	10	906,138,63,222,115,124,115,46,189,45,	0,3282,7812,20323,154945,178435,266164,328307,499800,500265,
#Partially deleted in new
chr4	166734480	167234426	chr4:166734480-167234426	0	-	166912738	167234173	789624	10	610,138,63,222,120,115,124,46,189,73,	0,2986,7516,20027,57689,154649,178139,328011,499504,499873,
#Partially deleted in new
chr4	166734522	167234491	chr4:166734522-167234491	1	-	166734920	167234173	789624	8	568,138,63,222,120,115,189,42,	0,2944,7474,19985,57647,154607,499462,499927,
#Partially deleted in new
chr4	166734547	167234266	chr4:166734547-167234266	1	-	166734920	167234173	789624	10	543,138,63,222,120,115,124,115,46,282,	0,2919,7449,19960,57622,154582,178072,265801,327944,499437,
#Partially deleted in new
chr4	166734594	167234492	chr4:166734594-167234492	0	-	166912716	167234173	789624	9	496,138,63,222,120,115,124,189,43,	0,2872,7402,19913,57575,154535,178025,499390,499855,
#Partially deleted in new
chr4	166734597	167234492	chr4:166734597-167234492	0	-	167119871	167234173	789624	12	493,138,63,222,120,115,124,115,46,81,189,43,	0,2869,7399,19910,57572,154532,178022,265751,327894,385196,499387,499852,
#Partially deleted in new
chr4	166734633	167234494	chr4:166734633-167234494	0	-	167000457	167234173	789624	10	457,138,63,222,120,115,124,115,189,45,	0,2833,7363,19874,57536,154496,177986,265715,499351,499816,
#Partially deleted in new
chr4	166754085	167234552	chr4:166754085-167234552	1	-	166754496	167234173	789624	8	644,120,115,124,115,46,189,103,	0,38084,135044,158534,246263,308406,479899,480364,
#Partially deleted in new
chr4	166754566	167234494	chr4:166754566-167234494	0	-	166754566	167234173	789624	5	163,120,46,189,45,	0,37603,307925,479418,479883,
#Partially deleted in new
chr4	166754641	167234065	chr4:166754641-167234065	0	-	166889234	167234065	789624	6	88,120,115,115,46,81,	0,37528,134488,245707,307850,479343,
#Partially deleted in new
chr4	166792271	167234426	chr4:166792271-167234426	0	-	166912738	167234173	789624	6	18,115,124,46,189,73,	0,96858,120348,270220,441713,442082,
#Partially deleted in new
chr4	166882822	167234562	chr4:166882822-167234562	0	-	166889234	167234173	789624	7	445,115,115,46,9,189,113,	0,6307,117526,179669,179819,351162,351627,
#Partially deleted in new
chr4	166882822	167234562	chr4:166882822-167234562	0	-	166889234	167234173	789624	7	445,115,115,46,9,189,113,	0,6307,117526,179669,200415,351162,351627,
#Partially deleted in new
chr4	166889235	167234426	chr4:166889235-167234426	0	-	166889235	167234173	789624	6	9,124,115,46,189,73,	0,23384,111113,173256,344749,345118,
#Partially deleted in new
chr4	166912693	167234492	chr4:166912693-167234492	0	-	167011267	167234173	789624	6	50,115,81,46,189,43,	0,87655,98528,149798,321291,321756,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	166918363	166918478	chr4:166918363-166918478	7	-	166918363	166918363	16724991	1	115,	0,
#Partially deleted in new
chr4	167000361	167234332	chr4:167000361-167234332	0	-	167000361	167234173	789624	4	102,46,9,348,	0,62130,82876,233623,
#Partially deleted in new
chr4	167000361	167234332	chr4:167000361-167234332	0	-	167000361	167234173	789624	4	102,46,9,348,	0,62130,62280,233623,
#Partially deleted in new
chr4	167306909	167308789	chr4:167306909-167308789	3	-	167306909	167306909	8553170	3	302,121,166,	0,1266,1714,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	167400494	167400762	chr4:167400494-167400762	3	-	167400494	167400494	8553170	1	268,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	167648429	167648796	chr4:167648429-167648796	7	+	167648429	167648429	16724991	1	367,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	167662985	167663302	chr4:167662985-167663302	3	+	167662985	167662985	8553170	1	317,	0,
#Partially deleted in new
chr4	167741878	167742287	chr4:167741878-167742287	7	-	167741878	167741878	16724991	1	409,	0,
#Partially deleted in new
chr4	168092514	168187690	chr4:168092514-168187690	3	+	168092700	168187434	789624	12	204,82,95,114,91,80,54,94,96,59,123,325,	0,35569,46971,70013,71683,72732,85225,85375,86702,89168,92044,94851,
#Partially deleted in new
chr4	168165183	168187690	chr4:168165183-168187690	0	+	168165183	168165183	8553170	7	143,54,94,96,59,123,325,	0,12556,12706,14033,16499,19375,22182,
#Partially deleted in new
chr4	168165240	168178315	chr4:168165240-168178315	0	+	168165240	168165240	8553170	3	86,54,426,	0,12499,12649,
#Partially deleted in new
chr4	168216292	168318807	chr4:168216292-168318807	3	-	168216932	168311259	789624	38	740,63,152,143,148,122,142,105,201,105,153,148,159,125,129,105,110,143,116,96,120,150,159,167,256,161,116,106,156,142,159,159,117,342,190,70,110,186,	0,4362,5437,7950,9236,19959,20993,21398,30125,31895,34661,36216,39418,44572,45707,46390,51289,51548,52561,55750,56986,57641,59052,59722,64042,67153,68527,69100,70755,71881,75455,77494,86007,90086,91713,94705,94963,102329,
#Partially deleted in new
chr4	168220553	168236262	chr4:168220553-168236262	0	-	168220596	168236262	789624	5	164,152,143,148,11,	0,1176,3689,4975,15698,
#Partially deleted in new
chr4	168236028	168237488	chr4:168236028-168237488	0	-	168236028	168236028	8553170	2	345,203,	0,1257,
#Partially deleted in new
chr4	168262706	168268911	chr4:168262706-168268911	0	-	168265611	168268911	789624	5	81,150,110,143,58,	0,2758,4875,5134,6147,
#Partially deleted in new
chr4	168306625	168318804	chr4:168306625-168318804	0	-	168306625	168311259	789624	5	95,190,70,110,69,	0,1380,4372,4630,12110,
#Boundary problem: need 38, got 0, diff 38, mapped 0.0
chr4	168356734	168480487	chr4:168356734-168480487	1	-	168358146	168472699	789624	38	1542,63,152,143,148,122,142,105,201,105,153,166,153,125,129,105,110,143,116,96,120,150,147,167,253,161,116,106,156,142,159,114,117,342,190,70,114,111,	0,4414,14877,16931,18642,21619,22628,22991,27877,34805,37730,39224,44091,47247,49215,49867,58673,58922,59947,62567,63526,65025,65789,66873,70335,73743,75720,76275,84602,91903,96389,99304,101157,104964,115012,115720,115961,123642,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	168356734	168380806	chr4:168356734-168380806	0	-	168356734	168356734	8553170	9	1542,63,152,143,148,116,122,142,1081,	0,4414,14877,16931,18642,20993,21619,22628,22991,
#Boundary problem: need 38, got 0, diff 38, mapped 0.0
chr4	168356734	168480514	chr4:168356734-168480514	3	-	168358146	168472699	789624	38	1542,63,152,143,148,122,142,105,201,101,157,166,153,125,129,105,110,143,116,96,120,150,147,167,253,161,116,106,156,142,159,114,117,342,190,70,114,138,	0,4414,14877,16931,18642,21619,22628,22991,27877,34805,37726,39224,44091,47247,49215,49867,58673,58922,59947,62567,63526,65025,65789,66873,70335,73743,75720,76275,84602,91903,96389,99304,101157,104964,115012,115720,115961,123642,
#Partially deleted in new
chr4	168358060	168361439	chr4:168358060-168361439	0	-	168358060	168358060	8553170	2	216,291,	0,3088,
#Partially deleted in new
chr4	168390101	168480487	chr4:168390101-168480487	1	-	168390521	168472699	789624	30	429,101,157,169,153,125,129,105,110,143,116,96,120,150,147,167,253,161,116,106,156,142,159,114,117,342,190,70,114,111,	0,1438,4359,5857,10724,13880,15848,16500,25306,25555,26580,29200,30159,31658,32422,33506,36968,40376,42353,42908,51235,58536,63022,65937,67790,71597,81645,82353,82594,90275,
#Partially deleted in new
chr4	168390294	168400978	chr4:168390294-168400978	0	-	168390521	168400978	789624	5	236,101,157,166,153,	0,1245,4166,5664,10531,
#Partially deleted in new
chr4	168395715	168400978	chr4:168395715-168400978	0	-	168395715	168395715	8553170	2	409,153,	0,5110,
#Partially deleted in new
chr4	168396098	168456059	chr4:168396098-168456059	0	-	168396098	168456059	789624	20	26,153,125,129,105,110,143,116,120,150,147,167,253,161,116,106,156,142,159,21,	0,4727,7883,9851,10503,19309,19558,20583,24162,25661,26425,27509,30971,34379,36356,36911,45238,52539,57025,59940,
#Partially deleted in new
chr4	168415784	168422588	chr4:168415784-168422588	0	-	168415784	168415784	8553170	6	15,116,83,120,150,65,	0,897,3517,4476,5975,6739,
#Partially deleted in new
chr4	168461930	168480298	chr4:168461930-168480298	0	-	168461930	168472699	789624	5	110,190,70,114,104,	0,9816,10524,10765,18264,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	168462008	168480477	chr4:168462008-168480477	0	-	168462008	168472699	789624	6	32,190,70,114,125,101,	0,9738,10446,10687,13987,18368,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	168468747	168480439	chr4:168468747-168480439	0	-	168468747	168468747	8553170	6	2090,190,70,114,125,63,	0,2999,3707,3948,7248,11629,
#Deleted in new
chr4	168471408	168471539	chr4:168471408-168471539	3	+	168471408	168471408	8553170	1	131,	0,
#Partially deleted in new
chr4	168471779	168480477	chr4:168471779-168480477	0	-	168471779	168472699	789624	4	157,70,114,87,	0,675,916,8611,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	168476066	168537786	chr4:168476066-168537786	0	-	168476066	168476066	8553170	5	54,93,220,142,146,	0,14291,16599,54494,61574,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	168489089	168536596	chr4:168489089-168536596	0	-	168489089	168489089	8553170	6	219,93,220,133,55,49,	0,1268,3576,15743,16989,47458,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr4	168497065	168928457	chr4:168497065-168928457	3	+	168511504	168925246	789624	21	129,990,179,67,106,75,142,24,120,343,136,99,222,150,95,133,208,166,134,46,2245,	0,14357,171124,184266,185932,188419,193537,194203,211962,214515,393856,397513,401427,406691,416861,418829,424468,427189,427879,428167,429147,
#Partially deleted in new
chr4	168497103	168926272	chr4:168497103-168926272	1	+	168511504	168925246	789624	22	91,990,179,67,106,75,142,24,120,343,136,99,51,222,150,95,133,208,166,134,46,60,	0,14319,171086,184228,185894,188381,193499,194165,211924,214477,393818,397475,399445,401389,406653,416823,418791,424430,427151,427841,428129,429109,
#Partially deleted in new
chr4	168497123	168511588	chr4:168497123-168511588	0	+	168511504	168511588	789624	3	71,339,166,	0,10236,14299,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	168511567	168700900	chr4:168511567-168700900	0	+	168511567	168700119	789624	8	845,179,67,106,75,142,24,882,	0,156622,169764,171430,173917,179035,179701,188451,
#Partially deleted in new
chr4	168598239	168598757	chr4:168598239-168598757	7	-	168598239	168598239	16724991	2	246,203,	0,315,
#Partially deleted in new
chr4	168631614	168690663	chr4:168631614-168690663	0	+	168681390	168690663	789624	6	112,149,67,106,75,61,	0,46285,49717,51383,53870,58988,
#Partially deleted in new
chr4	168631616	168926487	chr4:168631616-168926487	1	+	168681390	168926385	789624	19	284,179,67,106,75,142,24,120,343,136,99,222,150,95,133,208,166,134,275,	0,36573,49715,51381,53868,58986,59652,77411,79964,259305,262962,266876,272140,282310,284278,289917,292638,293328,294596,
#Deleted in new
chr4	168647895	168648587	chr4:168647895-168648587	3	-	168647895	168647895	8553170	3	205,147,96,	0,302,596,
#Partially deleted in new
chr4	168648776	168690628	chr4:168648776-168690628	0	+	168681390	168690628	789624	6	112,179,67,106,75,26,	0,19413,32555,34221,36708,41826,
#Partially deleted in new
chr4	168654731	168690701	chr4:168654731-168690701	0	+	168681390	168690701	789624	6	81,179,67,106,75,99,	0,13458,26600,28266,30753,35871,
#Partially deleted in new
chr4	168711580	168891057	chr4:168711580-168891057	0	+	168711580	168891057	8553170	3	343,672,136,	0,166142,179341,
#Partially deleted in new
chr4	168712158	168898686	chr4:168712158-168898686	0	+	168894599	168898686	789624	4	116,136,99,194,	0,178763,182420,186334,
#Deleted in new
chr4	168755815	168756382	chr4:168755815-168756382	7	+	168755815	168755815	16724991	1	567,	0,
#Partially deleted in new
chr4	168828918	168832937	chr4:168828918-168832937	3	-	168828918	168828918	8553170	2	351,201,	0,3818,
#Partially deleted in new
chr4	168832004	168913969	chr4:168832004-168913969	0	+	168894599	168913969	789624	6	167,136,99,222,150,43,	0,58917,62574,66488,71752,81922,
#Partially deleted in new
chr4	168832027	168928445	chr4:168832027-168928445	1	+	168877891	168926385	789624	12	144,672,136,99,222,150,95,133,208,166,134,2233,	0,45695,58894,62551,66465,71729,81899,83867,89506,92227,92917,94185,
#Deleted in new
chr4	168843987	168844735	chr4:168843987-168844735	3	+	168843987	168843987	8553170	1	748,	0,
#Partially deleted in new
chr4	168863769	169010258	chr4:168863769-169010258	0	-	169006877	169010089	789624	6	204,215,196,135,137,311,	0,602,30800,138301,142985,146178,
#Partially deleted in new
chr4	168863792	169006788	chr4:168863792-169006788	0	-	168863792	168863792	8553170	4	181,196,135,34,	0,30777,138278,142962,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	168885354	168885461	chr4:168885354-168885461	3	+	168885354	168885354	8553170	1	107,	0,
#Partially deleted in new
chr4	168894168	168898516	chr4:168894168-168898516	0	+	168894168	168894168	8553170	2	509,24,	0,4324,
#Partially deleted in new
chr4	168894440	168903835	chr4:168894440-168903835	0	+	168894440	168894440	8553170	4	237,51,222,79,	0,2108,4052,9316,
#Partially deleted in new
chr4	168894640	168914075	chr4:168894640-168914075	0	+	168894640	168894640	8553170	4	37,222,150,149,	0,3852,9116,19286,
#Partially deleted in new
chr4	168897976	168928417	chr4:168897976-168928417	0	+	168897976	168897976	8553170	8	738,150,95,133,208,166,134,2205,	0,5780,15950,17918,23557,26278,26968,28236,
#Partially deleted in new
chr4	168898558	168904261	chr4:168898558-168904261	0	+	168898558	168898558	8553170	2	156,505,	0,5198,
#Deleted in new
chr4	168921574	168925393	chr4:168921574-168925393	0	+	168921574	168925246	789624	4	167,166,134,161,	0,2680,3370,3658,
#Partially deleted in new
chr4	168987589	169010258	chr4:168987589-169010258	3	-	168990149	169010089	0	5	2739,135,137,121,311,	0,14481,19165,20046,22358,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	169001168	169010254	chr4:169001168-169010254	1	-	169002065	169010089	0	4	1037,137,121,307,	0,5586,6467,8779,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	169001574	169010080	chr4:169001574-169010080	0	-	169002065	169010080	789624	5	631,30,137,121,133,	0,4310,5180,6061,8373,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	169005248	169005344	chr4:169005248-169005344	3	+	169005248	169005248	8553170	1	96,	0,
#Deleted in new
chr4	169006801	169010250	chr4:169006801-169010250	0	-	169008958	169010089	789624	4	90,121,48,303,	0,834,2150,3146,
#Deleted in new
chr4	169007640	169010275	chr4:169007640-169010275	0	-	169009013	169010089	789624	3	116,103,328,	0,1311,2307,
#Deleted in new
chr4	169010429	169010939	chr4:169010429-169010939	3	+	169010429	169010429	8553170	2	27,156,	0,354,
#Partially deleted in new
chr4	169094255	169271105	chr4:169094255-169271105	3	-	169096518	169269212	789624	12	2432,359,362,260,171,167,111,303,96,276,488,247,	0,12591,22013,23267,26563,27844,35790,42062,61224,62148,174564,176603,
#Partially deleted in new
chr4	169116268	169269093	chr4:169116268-169269093	0	-	169116268	169116268	8553170	9	362,260,171,167,111,303,96,276,274,	0,1254,4550,5831,13777,20049,39211,40135,152551,
#Partially deleted in new
chr4	169116268	169156657	chr4:169116268-169156657	0	-	169120942	169156657	789624	8	362,260,171,100,111,303,96,254,	0,1254,4550,5831,13777,20049,39211,40135,
#Deleted in new
chr4	169166271	169167117	chr4:169166271-169167117	7	+	169166271	169166271	16724991	1	846,	0,
#Partially deleted in new
chr4	169201793	169220349	chr4:169201793-169220349	3	+	169201793	169201793	8553170	5	71,136,229,136,65,	0,2177,15428,18205,18491,
#Deleted in new
chr4	169268913	169270849	chr4:169268913-169270849	0	-	169268913	169269212	789624	2	394,93,	0,1843,
#Deleted in new
chr4	169268975	169269957	chr4:169268975-169269957	0	-	169268975	169269212	789624	2	332,259,	0,723,
#Partially deleted in new
chr4	169393274	169612612	chr4:169393274-169612612	3	-	169394509	169602630	0	34	1249,133,131,209,152,248,89,121,177,153,229,66,132,96,78,84,103,132,164,75,51,60,60,152,61,201,55,87,68,84,98,97,165,593,	0,6950,7246,8377,13321,31278,32871,40270,44808,69968,83849,84157,86128,113762,114440,114973,144534,162445,162657,168205,168412,168557,168862,183653,187567,192074,194284,195374,196172,197451,205825,208733,209239,218745,
#Partially deleted in new
chr4	169393280	169612627	chr4:169393280-169612627	1	-	169394509	169602630	0	35	1243,133,131,209,152,248,89,121,177,153,229,66,132,96,78,84,84,103,164,75,51,60,60,152,61,201,55,87,68,84,98,97,165,124,406,	0,6944,7240,8371,13315,31272,32865,40264,44802,69962,83843,84151,86122,113756,114434,114967,115488,144528,162651,168199,168406,168551,168856,183647,187561,192068,194278,195368,196166,197445,205819,208727,209233,218739,218941,
#Partially deleted in new
chr4	169393389	169612583	chr4:169393389-169612583	1	-	169394509	169602630	0	33	1134,133,131,209,152,248,89,121,177,153,229,66,132,96,78,84,103,164,75,51,60,60,152,61,201,55,87,68,84,98,97,165,564,	0,6835,7131,8262,13206,31163,32756,40155,44693,69853,83734,84042,86013,113647,114325,114858,144419,162542,168090,168297,168442,168747,183538,187452,191959,194169,195259,196057,197336,205710,208618,209124,218630,
#Partially deleted in new
chr4	169393394	169612629	chr4:169393394-169612629	1	-	169394509	169602630	0	36	1129,133,131,209,152,248,89,121,177,153,229,66,132,96,78,84,84,103,132,164,75,51,60,60,152,61,201,55,87,68,84,98,97,165,124,408,	0,6830,7126,8257,13201,31158,32751,40150,44688,69848,83729,84037,86008,113642,114320,114853,115374,144414,162325,162537,168085,168292,168437,168742,183533,187447,191954,194164,195254,196052,197331,205705,208613,209119,218625,218827,
#Partially deleted in new
chr4	169394227	169612627	chr4:169394227-169612627	1	-	169394509	169602630	0	33	296,133,131,209,152,248,89,121,177,153,229,66,132,96,78,84,103,164,51,60,60,152,61,201,55,87,68,84,98,97,165,124,406,	0,5997,6293,7424,12368,30325,31918,39317,43855,69015,82896,83204,85175,112809,113487,114020,143581,161704,167459,167604,167909,182700,186614,191121,193331,194421,195219,196498,204872,207780,208286,217792,217994,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr4	169554042	169599143	chr4:169554042-169599143	0	-	169554042	169554042	8553170	14	1809,164,75,51,60,60,152,61,201,55,87,68,84,44,	0,1889,7437,7644,7789,8094,22885,26799,31306,33516,34606,35404,36683,45057,
#Partially deleted in new
chr4	169576603	169585499	chr4:169576603-169585499	0	-	169576921	169585499	789624	3	476,61,151,	0,4238,8745,
#Partially deleted in new
chr4	169585348	169612581	chr4:169585348-169612581	0	-	169599176	169602630	789624	8	201,55,87,68,84,98,149,562,	0,2210,3300,4098,5377,13751,17165,26671,
#Partially deleted in new
chr4	169612632	169689145	chr4:169612632-169689145	0	+	169635928	169689145	789624	5	45,176,158,100,103,	0,23280,67417,75025,76410,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	169620520	169723673	chr4:169620520-169723673	1	+	169635928	169719997	789624	13	543,176,158,100,188,123,207,81,546,187,399,217,3767,	0,15392,59529,67137,68522,70009,71593,75091,76668,83477,86347,92558,99386,
#Partially deleted in new
chr4	169620525	169720545	chr4:169620525-169720545	3	+	169635928	169720065	789624	14	538,176,158,100,188,123,207,81,546,187,399,217,76,639,	0,15387,59524,67132,68517,70004,71588,75086,76663,83472,86342,92553,97266,99381,
#Partially deleted in new
chr4	169620528	169720278	chr4:169620528-169720278	1	+	169635928	169719997	789624	12	535,176,158,100,188,123,207,546,187,399,217,372,	0,15384,59521,67129,68514,70001,71585,76660,83469,86339,92550,99378,
#Partially deleted in new
chr4	169620551	169687755	chr4:169620551-169687755	0	+	169635928	169687755	789624	4	131,176,158,98,	0,15361,59498,67106,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	169635982	169643168	chr4:169635982-169643168	0	+	169635982	169635982	8553170	2	106,461,	0,6725,
#Partially deleted in new
chr4	169660061	169713187	chr4:169660061-169713187	0	+	169660369	169713187	789624	11	387,158,100,188,123,207,81,546,187,399,109,	0,19988,27596,28981,30468,32052,35550,37127,43936,46806,53017,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	169660061	169723187	chr4:169660061-169723187	1	+	169660369	169719997	789624	12	387,158,100,188,123,207,81,546,187,399,217,3281,	0,19988,27596,28981,30468,32052,35550,37127,43936,46806,53017,59845,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr4	169662721	169723183	chr4:169662721-169723183	1	+	169662721	169719997	789624	14	17,1,91,158,100,188,123,207,81,546,187,399,217,3277,	0,392,805,17328,24936,26321,27808,29392,32890,34467,41276,44146,50357,57185,
#Deleted in new
chr4	169680067	169680731	chr4:169680067-169680731	0	+	169680067	169680067	8553170	2	140,353,	0,311,
#Partially deleted in new
chr4	169695630	169706888	chr4:169695630-169706888	0	+	169695630	169706888	789624	5	62,91,374,187,21,	0,1558,1730,8367,11237,
#Partially deleted in new
chr4	169729464	169757953	chr4:169729464-169757953	3	-	169729577	169757877	789624	8	245,173,88,151,99,190,160,124,	0,2239,8195,12492,19279,21071,24211,28365,
#Partially deleted in new
chr4	169729476	169732018	chr4:169729476-169732018	0	-	169729476	169729476	8553170	2	233,315,	0,2227,
#Partially deleted in new
chr4	169750471	169757904	chr4:169750471-169757904	0	-	169750471	169750471	8553170	3	254,160,75,	0,3204,7358,
#Deleted in new
chr4	169791220	169791702	chr4:169791220-169791702	7	-	169791220	169791220	16724991	1	482,	0,
#Deleted in new
chr4	169832652	169833363	chr4:169832652-169833363	7	+	169832652	169832652	16724991	1	711,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	169917760	169975902	chr4:169917760-169975902	3	-	169917760	169917760	789624	5	3937,127,76,138,87,	0,5300,16230,24945,58055,
#Partially deleted in new
chr4	169945980	169963334	chr4:169945980-169963334	3	+	169945980	169945980	8553170	2	249,200,	0,17154,
#Partially deleted in new
chr4	169981746	169993806	chr4:169981746-169993806	3	+	169981746	169981746	8553170	3	142,153,259,	0,8570,11801,
#Partially deleted in new
chr4	169986596	170003784	chr4:169986596-170003784	1	-	169991377	169992298	789624	2	5713,114,	0,17074,
#Partially deleted in new
chr4	169986597	170026408	chr4:169986597-170026408	3	-	169991377	170005877	789624	3	5712,431,175,	0,18982,39636,
#Partially deleted in new
chr4	169991828	170026316	chr4:169991828-170026316	0	-	169991828	169992298	789624	2	481,83,	0,34405,
#Partially deleted in new
chr4	169992107	170003756	chr4:169992107-170003756	0	-	169992107	169992298	789624	3	202,262,86,	0,9857,11563,
#Partially deleted in new
chr4	169992164	170026295	chr4:169992164-170026295	0	-	169992164	169992298	789624	4	145,148,196,62,	0,2805,13650,34069,
#Partially deleted in new
chr4	170004990	170027210	chr4:170004990-170027210	1	-	170005568	170005877	789624	3	1020,134,351,	0,1612,21869,
#Partially deleted in new
chr4	170005532	170032212	chr4:170005532-170032212	1	-	170005568	170005877	789624	3	359,38,151,	0,440,26529,
#Partially deleted in new
chr4	170005583	170026339	chr4:170005583-170026339	0	-	170005583	170005877	789624	3	427,134,106,	0,1019,20650,
#Partially deleted in new
chr4	170005607	170026430	chr4:170005607-170026430	0	-	170005607	170005877	789624	2	284,197,	0,20626,
#Partially deleted in new
chr4	170005658	170006975	chr4:170005658-170006975	0	-	170005658	170005877	789624	2	352,373,	0,944,
#Partially deleted in new
chr4	170031773	170033031	chr4:170031773-170033031	0	-	170031773	170031773	789624	3	125,190,248,	0,288,1010,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	170060221	170089967	chr4:170060221-170089967	1	-	170060927	170089690	0	13	748,102,107,65,62,97,83,66,210,75,133,169,344,	0,1670,4497,6192,7105,8369,8926,10365,12914,18287,26894,28174,29402,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr4	170060221	170090214	chr4:170060221-170090214	1	-	170060927	170089690	0	14	748,102,107,65,62,97,83,66,210,75,133,169,125,71,	0,1670,4497,6192,7105,8369,8926,10365,12914,18287,26894,28174,29390,29922,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr4	170060221	170090387	chr4:170060221-170090387	3	-	170060927	170089690	0	14	748,102,107,65,62,97,83,66,210,75,133,169,113,163,	0,1670,4497,6192,7105,8369,8926,10365,12914,18287,26894,28174,29402,30003,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr4	170060228	170090221	chr4:170060228-170090221	1	-	170060927	170089690	0	14	741,102,107,65,62,97,83,66,210,75,133,169,113,78,	0,1663,4490,6185,7098,8362,8919,10358,12907,18280,26887,28167,29395,29915,
#Partially deleted in new
chr4	170070476	170088430	chr4:170070476-170088430	0	-	170070476	170070476	8553170	5	176,210,75,133,35,	0,2659,8032,16639,17919,
#Partially deleted in new
chr4	170070618	170089394	chr4:170070618-170089394	0	-	170070618	170089300	789624	6	34,210,75,133,169,134,	0,2517,7890,16497,17777,18642,
#Partially deleted in new
chr4	170073160	170090296	chr4:170073160-170090296	0	-	170073160	170089690	789624	6	185,75,133,169,113,135,	0,5348,13955,15235,16463,17001,
#Deleted in new
chr4	170099817	170100104	chr4:170099817-170100104	7	+	170099817	170099817	16724991	1	287,	0,
#Partially deleted in new
chr4	170141291	170142532	chr4:170141291-170142532	7	-	170141291	170141291	16724991	2	511,332,	0,909,
#Partially deleted in new
chr4	170273918	170283079	chr4:170273918-170283079	3	+	170273918	170273918	8553170	3	46,94,329,	0,2663,8832,
#Partially deleted in new
chr4	170343088	170372311	chr4:170343088-170372311	3	+	170343088	170343088	8553170	3	41,86,302,	0,7481,28921,
#Deleted in new
chr4	170481694	170482195	chr4:170481694-170482195	7	-	170481694	170481694	16724991	1	501,	0,
#Deleted in new
chr4	170604715	170605450	chr4:170604715-170605450	5	-	170604715	170604715	16724991	1	735,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	170742468	170743718	chr4:170742468-170743718	3	-	170742468	170742468	789624	2	560,54,	0,1196,
#Partially deleted in new
chr4	170814338	170814548	chr4:170814338-170814548	7	-	170814338	170814338	16724991	1	210,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	170891466	170891597	chr4:170891466-170891597	3	+	170891466	170891466	8553170	1	131,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	171040601	171059163	chr4:171040601-171059163	3	+	171040601	171040601	789624	5	233,63,71,134,1287,	0,14753,15226,15603,17275,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	171040607	171059163	chr4:171040607-171059163	1	+	171040607	171040607	8553170	3	227,38,3336,	0,14747,15220,
#Deleted in new
chr4	171113788	171114581	chr4:171113788-171114581	7	+	171113788	171113788	16724991	2	24,559,	0,234,
#Deleted in new
chr4	171169208	171169942	chr4:171169208-171169942	7	-	171169208	171169208	16724991	1	734,	0,
#Deleted in new
chr4	171186183	171186292	chr4:171186183-171186292	3	+	171186183	171186183	5263520	1	109,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	171289474	171298267	chr4:171289474-171298267	3	-	171289474	171289474	8553170	2	4755,194,	0,8599,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	171602682	171638763	chr4:171602682-171638763	3	-	171602682	171602682	789624	5	181,95,80,93,104,	0,1375,17813,33302,35977,
#Deleted in new
chr4	171812253	171815579	chr4:171812253-171815579	1	+	171814580	171814766	789624	2	1737,1168,	0,2158,
#Partially deleted in new
chr4	171813502	173041559	chr4:171813502-173041559	3	+	171814580	173040100	789624	13	488,307,109,139,167,186,184,118,108,222,117,150,1627,	0,909,416153,498111,535020,995858,1000037,1069287,1117658,1138534,1195675,1207973,1226430,
#Deleted in new
chr4	171813522	171816191	chr4:171813522-171816191	0	+	171813522	171813522	8553170	3	468,307,154,	0,889,2515,
#Deleted in new
chr4	171813522	171816353	chr4:171813522-171816353	0	+	171813522	171813522	8553170	3	468,307,360,	0,889,2471,
#Partially deleted in new
chr4	172052444	173040100	chr4:172052444-173040100	1	+	172052444	173040100	789624	12	87,109,139,167,186,184,118,108,222,117,150,168,	0,177211,259169,296078,756916,761095,830345,878716,899592,956733,969031,987488,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	172266153	172669207	chr4:172266153-172669207	0	+	172266153	172266153	8553170	6	196,139,167,43,100,2423,	0,45460,82369,159130,279495,400631,
#Deleted in new
chr4	172380027	172380487	chr4:172380027-172380487	7	-	172380027	172380027	16724991	1	460,	0,
#Partially deleted in new
chr4	172809359	173040100	chr4:172809359-173040100	1	+	172809359	173040100	789624	8	187,184,118,108,222,117,150,168,	0,4180,73430,121801,142677,199818,212116,230573,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	173131927	173169652	chr4:173131927-173169652	3	-	173131927	173131927	789624	7	557,61,155,176,146,152,789,	0,32365,33050,34196,34717,36034,36936,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	173141642	173141938	chr4:173141642-173141938	3	+	173141642	173141642	8553170	1	296,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	173144235	173169155	chr4:173144235-173169155	1	-	173144235	173144235	789624	4	1276,146,152,292,	0,22409,23726,24628,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	173166068	173168927	chr4:173166068-173168927	0	-	173166068	173166068	8553170	4	231,146,152,64,	0,576,1893,2795,
#Partially deleted in new
chr4	173168752	173323967	chr4:173168752-173323967	3	+	173168835	173321717	789624	12	209,461,167,131,80,183,118,123,219,99,129,2388,	0,79227,123355,126643,127011,129362,133294,135243,145205,148881,149678,152827,
#Partially deleted in new
chr4	173168810	173298371	chr4:173168810-173298371	1	+	173168835	173297981	789624	6	151,461,167,131,80,577,	0,79169,123297,126585,126953,128984,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	173282434	173295760	chr4:173282434-173295760	0	+	173282434	173282434	8553170	3	36,167,365,	0,9673,12961,
#Partially deleted in new
chr4	173292130	173322011	chr4:173292130-173322011	0	+	173292130	173321717	789624	10	144,131,80,183,118,123,219,99,129,432,	0,3265,3633,5664,9916,11865,21827,25503,26300,29449,
#Partially deleted in new
chr4	173298035	173314037	chr4:173298035-173314037	0	+	173298035	173298035	8553170	4	262,118,123,80,	0,4011,5960,15922,
#Partially deleted in new
chr4	173304018	173318660	chr4:173304018-173318660	0	+	173304018	173318610	789624	4	100,219,99,230,	0,9939,13615,14412,
#Partially deleted in new
chr4	173315840	173323127	chr4:173315840-173323127	0	+	173315840	173315840	8553170	3	1892,129,1548,	0,2590,5739,
#Partially deleted in new
chr4	173322205	173329694	chr4:173322205-173329694	3	-	173322205	173322205	8553170	3	394,52,75,	0,4463,7414,
#Partially deleted in new
chr4	173331694	173335125	chr4:173331694-173335125	3	-	173332079	173333649	789624	5	544,175,146,170,854,	0,1126,1374,1805,2577,
#Partially deleted in new
chr4	173331700	173333672	chr4:173331700-173333672	1	-	173332079	173333649	789624	4	538,175,146,173,	0,1120,1368,1799,
#Partially deleted in new
chr4	173331700	173334391	chr4:173331700-173334391	1	-	173332079	173333649	789624	5	538,175,146,170,146,	0,1120,1368,1799,2545,
#Partially deleted in new
chr4	173331704	173334432	chr4:173331704-173334432	0	-	173331704	173331704	8553170	3	1510,170,161,	0,1795,2567,
#Partially deleted in new
chr4	173332888	173334249	chr4:173332888-173334249	0	-	173332888	173333649	789624	4	107,146,170,206,	0,180,611,1155,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	173363779	173370446	chr4:173363779-173370446	3	-	173363779	173363779	8553170	3	419,177,155,	0,5654,6512,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	173363993	173369815	chr4:173363993-173369815	1	-	173363993	173363993	8553170	2	205,382,	0,5440,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	173367894	173369815	chr4:173367894-173369815	1	-	173367894	173367894	8553170	1	1921,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	173369361	173370326	chr4:173369361-173370326	1	-	173369361	173369361	8553170	2	249,35,	0,930,
#Deleted in new
chr4	173369968	173371232	chr4:173369968-173371232	0	+	173369968	173369968	8553170	3	84,128,198,	0,597,1066,
#Partially deleted in new
chr4	173370942	173377532	chr4:173370942-173377532	3	+	173371182	173377327	0	4	555,126,99,328,	0,2447,2996,6262,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	173384700	173399536	chr4:173384700-173399536	3	-	173388340	173391414	789624	3	3695,256,469,	0,6472,14367,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	173388161	173406380	chr4:173388161-173406380	0	-	173389855	173391414	789624	9	234,298,256,173,176,136,120,128,121,	0,1433,3011,10100,10906,14962,15912,16143,18098,
#Deleted in new
chr4	173419244	173420137	chr4:173419244-173420137	7	-	173419244	173419244	16724991	1	893,	0,
#Partially deleted in new
chr4	173446602	173446704	chr4:173446602-173446704	3	-	173446602	173446602	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	173467832	173470041	chr4:173467832-173470041	3	-	173467832	173467832	8553170	1	2209,	0,
#Deleted in new
chr4	173524968	173528912	chr4:173524968-173528912	0	-	173527276	173528912	789624	4	60,105,363,178,	0,304,2044,3766,
#Deleted in new
chr4	173526090	173530229	chr4:173526090-173530229	3	-	173527276	173529289	789624	2	1285,1495,	0,2644,
#Deleted in new
chr4	173526500	173529289	chr4:173526500-173529289	1	-	173527276	173529289	789624	3	875,252,210,	0,2234,2579,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	173527269	173583375	chr4:173527269-173583375	0	+	173527269	173527269	8553170	4	1232,112,123,671,	0,3697,9578,55435,
#Deleted in new
chr4	173528078	173530206	chr4:173528078-173530206	0	-	173528078	173528078	8553170	3	1265,81,27,	0,1466,2101,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	173528450	173589252	chr4:173528450-173589252	1	+	173528450	173528450	8553170	4	389,123,174,4617,	0,8397,54254,56185,
#Deleted in new
chr4	173528599	173538180	chr4:173528599-173538180	0	+	173528599	173528599	789624	4	240,112,123,118,	0,2367,8248,9463,
#Deleted in new
chr4	173528616	173538531	chr4:173528616-173538531	0	+	173528616	173528616	8553170	4	223,112,123,1169,	0,2350,8231,8746,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	173528641	173594553	chr4:173528641-173594553	0	+	173528641	173528641	8553170	3	198,174,3481,	0,54063,62431,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	173528698	173659696	chr4:173528698-173659696	1	+	173528698	173528698	8553170	3	141,134,978,	0,105912,130020,
#Deleted in new
chr4	173530370	173541931	chr4:173530370-173541931	0	+	173530370	173530370	789624	4	169,112,123,3869,	0,596,6477,7692,
#Deleted in new
chr4	173530370	173538973	chr4:173530370-173538973	0	+	173530370	173530370	8553170	4	169,112,123,911,	0,596,6477,7692,
#Partially deleted in new
chr4	173530440	173591153	chr4:173530440-173591153	0	+	173530440	173530440	789624	5	99,112,105,174,81,	0,526,28656,52264,60632,
#Deleted in new
chr4	173530457	173538960	chr4:173530457-173538960	0	+	173530457	173530457	8553170	4	82,279,123,898,	0,342,6390,7605,
#Deleted in new
chr4	173530457	173541931	chr4:173530457-173541931	1	+	173530457	173530457	8553170	3	82,112,5084,	0,509,6390,
#Deleted in new
chr4	173530457	173541830	chr4:173530457-173541830	0	+	173530457	173530457	8553170	3	82,123,153,	0,6390,11220,
#Deleted in new
chr4	173530457	173541931	chr4:173530457-173541931	0	+	173530457	173530457	789624	4	175,112,123,457,	0,509,6390,11017,
#Deleted in new
chr4	173530457	173541830	chr4:173530457-173541830	0	+	173530457	173530457	8553170	4	82,279,123,356,	0,342,6390,11017,
#Deleted in new
chr4	173530457	173541931	chr4:173530457-173541931	0	+	173530457	173530457	8553170	4	175,112,123,2786,	0,509,6390,8688,
#Deleted in new
chr4	173530457	173541830	chr4:173530457-173541830	0	+	173530457	173530457	8553170	4	175,112,123,153,	0,509,6390,11220,
#Deleted in new
chr4	173530457	173541931	chr4:173530457-173541931	0	+	173530457	173530457	8553170	4	175,112,123,2734,	0,509,6390,8740,
#Deleted in new
chr4	173530457	173541830	chr4:173530457-173541830	0	+	173530457	173530457	8553170	4	82,112,123,356,	0,509,6390,11017,
#Deleted in new
chr4	173530457	173541830	chr4:173530457-173541830	0	+	173530457	173530457	8553170	3	82,123,356,	0,6390,11017,
#Deleted in new
chr4	173530457	173541931	chr4:173530457-173541931	0	+	173530457	173530457	8553170	4	175,112,123,2998,	0,509,6390,8476,
#Deleted in new
chr4	173530457	173541830	chr4:173530457-173541830	0	+	173530457	173530457	8553170	5	82,112,210,123,356,	0,509,3455,6390,11017,
#Deleted in new
chr4	173530457	173541931	chr4:173530457-173541931	0	+	173530457	173530457	8553170	4	175,112,123,2863,	0,509,6390,8611,
#Deleted in new
chr4	173530458	173539474	chr4:173530458-173539474	0	+	173530458	173530458	8553170	4	81,112,123,2112,	0,508,6389,6904,
#Deleted in new
chr4	173530458	173539469	chr4:173530458-173539469	1	+	173530458	173530458	8553170	4	81,112,120,2107,	0,508,6392,6904,
#Deleted in new
chr4	173530459	173538137	chr4:173530459-173538137	0	+	173530459	173530459	8553170	4	80,279,123,75,	0,340,6388,7603,
#Partially deleted in new
chr4	173530459	173591324	chr4:173530459-173591324	1	+	173530459	173530459	8553170	6	80,112,210,123,174,252,	0,507,3453,6388,52245,60613,
#Deleted in new
chr4	173530461	173531338	chr4:173530461-173531338	0	+	173530461	173530461	8553170	3	78,279,157,	0,338,720,
#Deleted in new
chr4	173530461	173537691	chr4:173530461-173537691	0	+	173530461	173530461	8553170	4	78,112,123,329,	0,505,6386,6901,
#Deleted in new
chr4	173530461	173537465	chr4:173530461-173537465	0	+	173530461	173530461	8553170	4	78,279,123,103,	0,338,6386,6901,
#Deleted in new
chr4	173530461	173537295	chr4:173530461-173537295	0	+	173530461	173530461	8553170	3	78,279,448,	0,338,6386,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	173530461	173585739	chr4:173530461-173585739	1	+	173530461	173530461	8553170	4	78,123,458,1104,	0,6386,52243,54174,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	173530462	173585728	chr4:173530462-173585728	0	+	173530462	173530462	789624	5	77,112,123,174,1093,	0,504,6385,52242,54173,
#Partially deleted in new
chr4	173530462	173584669	chr4:173530462-173584669	0	+	173530462	173530462	8553170	5	77,112,123,174,34,	0,504,6385,52242,54173,
#Deleted in new
chr4	173530473	173537415	chr4:173530473-173537415	3	+	173530473	173530473	8553170	4	66,51,112,568,	0,326,493,6374,
#Deleted in new
chr4	173530474	173534077	chr4:173530474-173534077	0	+	173530474	173530474	8553170	3	65,279,165,	0,325,3438,
#Partially deleted in new
chr4	173530474	173584832	chr4:173530474-173584832	0	+	173530474	173530474	8553170	4	65,112,174,197,	0,492,52230,54161,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	173530478	173583096	chr4:173530478-173583096	1	+	173530478	173530478	8553170	4	61,279,105,392,	0,321,28618,52226,
#Deleted in new
chr4	173530483	173537440	chr4:173530483-173537440	0	+	173530483	173530483	8553170	4	56,112,210,593,	0,483,3429,6364,
#Partially deleted in new
chr4	173530506	173583014	chr4:173530506-173583014	0	+	173530506	173530506	8553170	3	33,112,310,	0,460,52198,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	173530514	173583169	chr4:173530514-173583169	0	+	173530514	173530514	8553170	4	25,279,123,465,	0,285,6333,52190,
#Partially deleted in new
chr4	173530519	173591470	chr4:173530519-173591470	1	+	173530519	173530519	8553170	5	20,123,174,115,398,	0,6328,52185,57921,60553,
#Deleted in new
chr4	173530757	173537460	chr4:173530757-173537460	0	+	173530757	173530757	8553170	4	93,112,123,98,	0,209,6090,6605,
#Partially deleted in new
chr4	173531069	173583025	chr4:173531069-173583025	0	+	173531069	173531069	8553170	4	9,210,123,321,	0,2843,5778,51635,
#Partially deleted in new
chr4	173531174	173591255	chr4:173531174-173591255	0	+	173531174	173531174	8553170	4	155,123,174,183,	0,5673,51530,59898,
#Deleted in new
chr4	173531544	173537359	chr4:173531544-173537359	0	+	173531544	173531544	8553170	2	237,512,	0,5303,
#Partially deleted in new
chr4	173531731	173591399	chr4:173531731-173591399	0	+	173531731	173531731	8553170	4	2391,123,174,327,	0,5116,50973,59341,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	173548037	173562444	chr4:173548037-173562444	0	+	173548037	173548037	8553170	3	215,105,866,	0,11059,13541,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	173559153	173583128	chr4:173559153-173583128	1	+	173559153	173559153	8553170	3	48,166,424,	0,20237,23551,
#Partially deleted in new
chr4	173615935	173616906	chr4:173615935-173616906	7	-	173615935	173615935	16724991	1	971,	0,
#Partially deleted in new
chr4	173633727	173634371	chr4:173633727-173634371	7	-	173633727	173633727	16724991	1	644,	0,
#Partially deleted in new
chr4	173896393	173911895	chr4:173896393-173911895	1	-	173896393	173896393	8553170	4	332,275,75,95,	0,4043,7023,15407,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	173897251	173929431	chr4:173897251-173929431	3	+	173897251	173897251	8553170	4	69,80,155,207,	0,28626,31238,31973,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	173897272	173929525	chr4:173897272-173929525	0	+	173897272	173897272	789624	3	48,150,301,	0,31222,31952,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	173924206	173990851	chr4:173924206-173990851	3	-	173924206	173924206	8553170	3	1555,124,145,	0,3660,66500,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	174094659	174220398	chr4:174094659-174220398	3	-	174094659	174094659	789624	5	794,52,207,190,85,	0,2072,2963,25237,125654,
#Partially deleted in new
chr4	174135054	174154637	chr4:174135054-174154637	3	-	174135054	174135054	8553170	2	1093,51,	0,19532,
#Partially deleted in new
chr4	174164440	174168913	chr4:174164440-174168913	3	-	174164440	174164440	8553170	3	241,76,18,	0,4031,4455,
#Partially deleted in new
chr4	174236657	174284264	chr4:174236657-174284264	3	-	174237411	174263092	789624	6	942,197,119,127,337,855,	0,2336,4442,23041,26106,46752,
#Partially deleted in new
chr4	174236657	174263092	chr4:174236657-174263092	1	-	174237411	174263092	789624	6	942,197,119,127,32,174,	0,2336,4442,23041,26106,26261,
#Partially deleted in new
chr4	174236968	174283667	chr4:174236968-174283667	1	-	174237411	174263092	789624	7	631,197,119,127,32,182,258,	0,2025,4131,22730,25795,25950,46441,
#Partially deleted in new
chr4	174237358	174283646	chr4:174237358-174283646	0	-	174256091	174263092	789624	7	241,197,119,119,127,337,237,	0,1635,3741,18668,22340,25405,46051,
#Partially deleted in new
chr4	174241122	174283663	chr4:174241122-174283663	0	-	174241122	174263092	789624	5	96,127,337,114,254,	0,18576,21641,27931,42287,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr4	174283676	174320330	chr4:174283676-174320330	1	+	174299121	174317383	789624	12	267,97,139,148,147,123,171,207,76,125,38,2996,	0,14289,15395,18362,20026,20570,25012,26173,27106,32489,32853,33658,
#Partially deleted in new
chr4	174283729	174303801	chr4:174283729-174303801	0	+	174299121	174303801	789624	4	214,139,148,99,	0,15342,18309,19973,
#Partially deleted in new
chr4	174283903	174333380	chr4:174283903-174333380	1	+	174299121	174331595	789624	11	158,97,139,148,147,123,171,207,76,125,1899,	0,14062,15168,18135,19799,20343,24785,25946,26879,32262,47578,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr4	174283904	174332293	chr4:174283904-174332293	2	+	174299121	174317383	789624	14	157,97,139,148,147,123,171,207,76,125,38,1331,253,812,	0,14061,15167,18134,19798,20342,24784,25945,26878,32261,32625,33430,34930,47577,
#Partially deleted in new
chr4	174283922	174303802	chr4:174283922-174303802	0	+	174299121	174303802	789624	4	218,139,148,100,	0,15149,18116,19780,
#Partially deleted in new
chr4	174283968	174308775	chr4:174283968-174308775	0	+	174299121	174308775	789624	7	172,97,139,148,147,123,87,	0,13997,15103,18070,19734,20278,24720,
#Partially deleted in new
chr4	174284017	174304280	chr4:174284017-174304280	0	+	174299121	174304280	789624	6	123,141,139,148,147,34,	0,1416,15054,18021,19685,20229,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	174299069	174320331	chr4:174299069-174320331	1	+	174299121	174317383	789624	10	141,148,147,123,171,207,76,125,38,2997,	0,2969,4633,5177,9619,10780,11713,17096,17460,18265,
#Partially deleted in new
chr4	174299069	174333380	chr4:174299069-174333380	1	+	174299121	174331595	789624	9	141,148,147,123,171,207,76,125,1899,	0,2969,4633,5177,9619,10780,11713,17096,32412,
#Partially deleted in new
chr4	174308799	174316686	chr4:174308799-174316686	0	+	174308799	174308799	8553170	4	60,207,76,521,	0,1050,1983,7366,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	174354853	174376445	chr4:174354853-174376445	3	-	174354853	174354853	8553170	3	97,167,102,	0,15704,21490,
#Deleted in new
chr4	174423794	174423864	chr4:174423794-174423864	3	+	174423794	174423794	5263520	1	70,	0,
#Partially deleted in new
chr4	174490176	174522898	chr4:174490176-174522898	3	-	174491955	174522451	0	7	1918,164,77,97,107,124,540,	0,2974,5371,18519,27794,31767,32182,
#Partially deleted in new
chr4	174490176	174522898	chr4:174490176-174522898	1	-	174491955	174508753	0	6	1918,164,77,97,124,540,	0,2974,5371,18519,31767,32182,
#Partially deleted in new
chr4	174490176	174522898	chr4:174490176-174522898	1	-	174492083	174522451	0	5	1918,97,107,124,540,	0,18519,27794,31767,32182,
#Partially deleted in new
chr4	174491103	174522475	chr4:174491103-174522475	0	-	174518056	174522451	789624	6	991,164,77,97,107,117,	0,2047,4444,17592,26867,31255,
#Partially deleted in new
chr4	174491457	174522487	chr4:174491457-174522487	1	-	174492055	174522451	0	6	637,77,97,107,124,129,	0,4090,17238,26513,30486,30901,
#Partially deleted in new
chr4	174491570	174523065	chr4:174491570-174523065	1	-	174491955	174508753	0	7	524,164,77,97,107,124,442,	0,1580,3977,17125,26400,30373,31053,
#Partially deleted in new
chr4	174491754	174495829	chr4:174491754-174495829	0	-	174491754	174491754	8553170	3	340,164,282,	0,1396,3793,
#Partially deleted in new
chr4	174491784	174522488	chr4:174491784-174522488	1	-	174491955	174522451	0	5	310,164,77,124,130,	0,1366,3763,30159,30574,
#Partially deleted in new
chr4	174491793	174522641	chr4:174491793-174522641	0	-	174508745	174522451	789624	6	301,164,77,97,124,283,	0,1357,3754,16902,30150,30565,
#Deleted in new
chr4	174491869	174493461	chr4:174491869-174493461	0	-	174491869	174491869	8553170	2	225,311,	0,1281,
#Partially deleted in new
chr4	174493151	174523154	chr4:174493151-174523154	0	-	174493151	174508753	789624	7	163,77,97,107,124,108,143,	0,2396,15544,24819,28792,29472,29860,
#Partially deleted in new
chr4	174493158	174522333	chr4:174493158-174522333	0	-	174493158	174508753	789624	5	156,77,97,107,390,	0,2389,15537,24812,28785,
#Partially deleted in new
chr4	174495360	174522432	chr4:174495360-174522432	0	-	174495360	174495360	8553170	5	264,97,107,124,74,	0,13335,22610,26583,26998,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	174506742	174522499	chr4:174506742-174522499	1	-	174508073	174522451	789624	5	1441,97,107,124,141,	0,1953,11228,15201,15616,
#Partially deleted in new
chr4	174523700	174540344	chr4:174523700-174540344	7	-	174523700	174523700	16724991	3	922,136,1144,	0,12754,15500,
#Partially deleted in new
chr4	174536639	174540784	chr4:174536639-174540784	3	+	174536639	174536639	8553170	3	242,81,469,	0,1492,3676,
#Deleted in new
chr4	174539188	174540255	chr4:174539188-174540255	5	-	174539188	174539188	16724991	1	1067,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr4	174636913	174829314	chr4:174636913-174829314	3	-	174643785	174828811	0	10	7151,45,144,215,138,83,224,68,128,574,	0,19829,22140,40164,45888,78574,91561,130049,151902,191827,
#Partially deleted in new
chr4	174642486	174829227	chr4:174642486-174829227	1	-	174643785	174828811	0	9	1578,144,215,138,83,224,68,128,487,	0,16567,34591,40315,73001,85988,124476,146329,186254,
#Deleted in new
chr4	174712514	174713773	chr4:174712514-174713773	0	-	174712514	174712514	8553170	2	281,185,	0,1074,
#Partially deleted in new
chr4	174722623	174728698	chr4:174722623-174728698	0	-	174722623	174722623	8553170	2	363,224,	0,5851,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	174829667	174870787	chr4:174829667-174870787	0	+	174829667	174829667	8553170	3	199,89,1982,	0,5181,39138,
#Partially deleted in new
chr4	174829688	174931174	chr4:174829688-174931174	0	+	174829688	174829688	8553170	4	178,89,77,189,	0,5160,26842,101297,
#Partially deleted in new
chr4	174918357	174978180	chr4:174918357-174978180	1	+	174975525	174977988	789624	5	114,106,189,81,2835,	0,2329,12628,18575,56988,
#Partially deleted in new
chr4	174918357	174978180	chr4:174918357-174978180	1	+	174975525	174977988	789624	4	114,106,189,2835,	0,2329,12628,56988,
#Partially deleted in new
chr4	174918357	174975568	chr4:174918357-174975568	0	+	174975525	174975568	789624	4	114,106,189,223,	0,2329,12628,56988,
#Partially deleted in new
chr4	174918357	174931398	chr4:174918357-174931398	0	+	174918357	174918357	8553170	3	114,106,413,	0,2329,12628,
#Partially deleted in new
chr4	174918357	174978180	chr4:174918357-174978180	1	+	174975525	174977988	789624	6	114,61,106,189,81,2835,	0,572,2329,12628,18575,56988,
#Partially deleted in new
chr4	174918357	174978180	chr4:174918357-174978180	3	+	174975525	174977988	789624	2	114,2835,	0,56988,
#Partially deleted in new
chr4	174918365	174975794	chr4:174918365-174975794	0	+	174975525	174975794	789624	2	106,449,	0,56980,
#Partially deleted in new
chr4	174918371	174975657	chr4:174918371-174975657	0	+	174975525	174975657	789624	5	100,106,189,81,312,	0,2315,12614,18561,56974,
#Partially deleted in new
chr4	174918374	174936977	chr4:174918374-174936977	0	+	174918374	174918374	8553170	4	97,106,318,45,	0,2312,12611,18558,
#Partially deleted in new
chr4	174918405	174978180	chr4:174918405-174978180	1	+	174975525	174977988	789624	4	66,189,81,2835,	0,12580,18527,56940,
#Partially deleted in new
chr4	174918405	174975402	chr4:174918405-174975402	0	+	174918405	174918405	8553170	6	66,61,106,189,81,57,	0,524,2281,12580,18527,56940,
#Partially deleted in new
chr4	174918410	174978105	chr4:174918410-174978105	1	+	174975525	174977988	789624	3	61,189,2760,	0,12575,56935,
#Deleted in new
chr4	174923812	174924038	chr4:174923812-174924038	7	-	174923812	174923812	16724991	1	226,	0,
#Deleted in new
chr4	175017015	175019214	chr4:175017015-175019214	7	+	175017015	175017015	16724991	1	2199,	0,
#Partially deleted in new
chr4	175286604	175290767	chr4:175286604-175290767	7	+	175286604	175286604	16724991	2	1166,292,	0,3871,
#Deleted in new
chr4	175494613	175496000	chr4:175494613-175496000	7	+	175494613	175494613	16724991	1	1387,	0,
#Deleted in new
chr4	175574867	175576140	chr4:175574867-175576140	7	+	175574867	175574867	16724991	1	1273,	0,
#Partially deleted in new
chr4	175632933	176002332	chr4:175632933-176002332	3	-	175634904	175812227	789624	8	2124,66,77,154,157,193,59,24,	0,7195,7819,18900,40746,68641,179257,369375,
#Partially deleted in new
chr4	175633444	175812751	chr4:175633444-175812751	1	-	175634904	175812227	789624	7	1613,66,77,154,157,193,561,	0,6684,7308,18389,40235,68130,178746,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	175633444	175641745	chr4:175633444-175641745	0	-	175633444	175633444	8553170	3	1613,66,993,	0,6684,7308,
#Partially deleted in new
chr4	175633446	176002664	chr4:175633446-176002664	1	-	175634904	176002312	789624	7	1611,66,77,154,157,193,356,	0,6682,7306,18387,40233,68128,368862,
#Partially deleted in new
chr4	175634545	175787676	chr4:175634545-175787676	1	-	175634904	175787351	789624	7	512,66,77,154,157,193,341,	0,5583,6207,17288,39134,67029,152790,
#Partially deleted in new
chr4	175634707	175642082	chr4:175634707-175642082	0	-	175634707	175634707	8553170	4	350,66,77,59,	0,5421,6045,7316,
#Partially deleted in new
chr4	175634919	175654323	chr4:175634919-175654323	0	-	175634919	175634919	8553170	5	138,66,77,154,108,	0,5209,5833,16914,19296,
#Partially deleted in new
chr4	175640133	175970967	chr4:175640133-175970967	0	-	175640133	175970885	789624	6	61,77,154,157,193,95,	0,619,11700,33546,61441,330739,
#Partially deleted in new
chr4	175651826	175872730	chr4:175651826-175872730	0	-	175651826	175701615	789624	4	161,157,193,68,	0,21853,49748,220836,
#Partially deleted in new
chr4	175651833	175971988	chr4:175651833-175971988	0	-	175651833	175701615	789624	4	154,157,193,112,	0,21846,49741,320043,
#Partially deleted in new
chr4	175651869	175787387	chr4:175651869-175787387	0	-	175651869	175701615	789624	5	118,157,193,46,52,	0,21810,49705,135002,135466,
#Partially deleted in new
chr4	175651889	175907173	chr4:175651889-175907173	0	-	175651889	175701615	789624	4	98,157,193,131,	0,21790,49685,255153,
#Partially deleted in new
chr4	175651912	176002356	chr4:175651912-176002356	0	-	175651912	175701615	789624	5	75,145,193,105,48,	0,21779,49662,309324,350396,
#Partially deleted in new
chr4	175651917	175807617	chr4:175651917-175807617	0	-	175651917	175701615	789624	4	70,157,193,270,	0,21762,49657,155430,
#Partially deleted in new
chr4	175651939	175812264	chr4:175651939-175812264	0	-	175651939	175701615	789624	5	48,157,193,89,74,	0,21740,49635,129269,160251,
#Partially deleted in new
chr4	175673679	175907168	chr4:175673679-175907168	0	-	175673679	175812227	789624	5	157,193,59,199,126,	0,27895,138511,232973,233363,
#Partially deleted in new
chr4	175673728	175970947	chr4:175673728-175970947	0	-	175673728	175701615	789624	6	108,193,54,16,105,75,	0,27846,273916,287015,287508,297144,
#Partially deleted in new
chr4	175673746	175788079	chr4:175673746-175788079	0	-	175673746	175701615	789624	3	90,193,301,	0,27828,114032,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	175673753	175891754	chr4:175673753-175891754	0	-	175673753	175701615	789624	3	83,193,292,	0,27821,217709,
#Partially deleted in new
chr4	175701584	175788055	chr4:175701584-175788055	0	-	175701584	175787351	789624	3	183,90,277,	0,85751,86194,
#Partially deleted in new
chr4	175790306	175812189	chr4:175790306-175812189	3	+	175790306	175790306	789624	8	111,93,39,217,154,107,162,330,	0,5529,8339,10463,15619,16558,18294,21553,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	175812196	175907316	chr4:175812196-175907316	0	-	175812196	175812227	789624	3	53,228,274,	0,79266,94846,
#Deleted in new
chr4	175962060	175962485	chr4:175962060-175962485	7	+	175962060	175962060	16724991	1	425,	0,
#Deleted in new
chr4	176012037	176014417	chr4:176012037-176014417	7	-	176012037	176012037	16724991	1	2380,	0,
#Partially deleted in new
chr4	176065833	176179769	chr4:176065833-176179769	1	+	176111580	176179579	789624	29	246,129,184,231,252,123,185,169,92,83,87,165,203,150,131,126,156,65,133,92,100,140,112,142,103,102,99,184,310,	0,45741,49962,54033,59270,62904,65720,69274,71686,74058,76149,80161,82299,83973,84209,84634,85978,90245,94160,95077,96241,97320,102838,106541,107433,108783,111224,111637,113626,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	176065876	176111293	chr4:176065876-176111293	0	+	176065876	176065876	8553170	3	203,167,86,	0,2343,45331,
#Partially deleted in new
chr4	176065980	176180159	chr4:176065980-176180159	3	+	176096519	176179579	789624	31	99,123,129,184,231,252,123,185,169,92,83,87,165,203,150,131,126,156,65,133,92,100,140,21,136,142,103,102,99,184,700,	0,30482,45594,49815,53886,59123,62757,65573,69127,71539,73911,76002,80014,82152,83826,84062,84487,85831,90098,94013,94930,96094,97173,100143,102667,106394,107286,108636,111077,111490,113479,
#Partially deleted in new
chr4	176096484	176179769	chr4:176096484-176179769	1	+	176096519	176179579	789624	30	101,129,184,231,201,123,185,169,92,83,87,165,203,150,131,126,156,65,133,92,100,140,21,112,142,103,102,99,184,310,	0,15090,19311,23382,28670,32253,35069,38623,41035,43407,45498,49510,51648,53322,53558,53983,55327,59594,63509,64426,65590,66669,69639,72187,75890,76782,78132,80573,80986,82975,
#Partially deleted in new
chr4	176096509	176125133	chr4:176096509-176125133	0	+	176096519	176119977	789624	4	76,129,231,30,	0,15065,23357,28594,
#Deleted in new
chr4	176098162	176098285	chr4:176098162-176098285	3	+	176098162	176098162	8553170	1	123,	0,
#Partially deleted in new
chr4	176119866	176137611	chr4:176119866-176137611	0	+	176119866	176137611	789624	4	231,185,169,92,	0,11687,15241,17653,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr4	176150490	176182818	chr4:176150490-176182818	0	+	176150490	176179579	789624	15	103,156,65,133,92,100,140,21,112,142,103,102,99,184,3359,	0,1321,5588,9503,10420,11584,12663,15633,18181,21884,22776,24126,26567,26980,28969,
#Partially deleted in new
chr4	176172330	176177151	chr4:176172330-176177151	0	+	176172330	176172330	8553170	4	186,103,102,94,	0,936,2286,4727,
#Partially deleted in new
chr4	176184637	176195671	chr4:176184637-176195671	3	-	176184779	176195562	789624	6	255,117,221,119,130,327,	0,3481,7989,8320,8815,10707,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	176184659	176194877	chr4:176184659-176194877	1	-	176184779	176192795	789624	5	233,117,221,119,1425,	0,3459,7967,8298,8793,
#Partially deleted in new
chr4	176192971	176195541	chr4:176192971-176195541	0	-	176193519	176195541	789624	3	105,101,197,	0,481,2373,
#Partially deleted in new
chr4	176213672	176269222	chr4:176213672-176269222	3	-	176215599	176269108	789624	7	2055,192,135,151,108,80,310,	0,3145,7482,7777,8640,11589,55240,
#Partially deleted in new
chr4	176215572	176241676	chr4:176215572-176241676	1	-	176215599	176241498	789624	7	155,192,135,151,108,80,215,	0,1245,5582,5877,6740,9689,25889,
#Partially deleted in new
chr4	176221517	176237574	chr4:176221517-176237574	0	-	176221517	176221517	8553170	4	83,108,80,281,	0,795,3744,15776,
#Partially deleted in new
chr4	176225280	176249558	chr4:176225280-176249558	0	-	176225280	176225280	8553170	2	61,83,	0,24195,
#Partially deleted in new
chr4	176269048	176277571	chr4:176269048-176277571	0	-	176269048	176269108	789624	3	149,111,343,	0,6747,8180,
#Partially deleted in new
chr4	176308267	176320458	chr4:176308267-176320458	3	-	176308267	176308267	8553170	3	200,96,314,	0,3220,11877,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	176319963	176332245	chr4:176319963-176332245	3	+	176320076	176328330	789624	5	256,74,77,116,4048,	0,2206,4217,7198,8234,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	176319990	176328406	chr4:176319990-176328406	0	+	176319990	176319990	8553170	4	2253,77,116,209,	0,4190,7171,8207,
#Partially deleted in new
chr4	176320001	176327381	chr4:176320001-176327381	0	+	176320001	176320001	8553170	4	218,74,77,220,	0,2168,4179,7160,
#Deleted in new
chr4	176326955	176328353	chr4:176326955-176328353	0	+	176326955	176326955	8553170	2	322,156,	0,1242,
#Partially deleted in new
chr4	176631391	176633231	chr4:176631391-176633231	7	-	176631391	176631391	16724991	3	56,926,68,	0,193,1772,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	176669620	176706069	chr4:176669620-176706069	3	+	176669620	176669620	8553170	3	89,51,167,	0,10079,36282,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	176669620	176706145	chr4:176669620-176706145	0	+	176669620	176669620	8553170	2	89,243,	0,36282,
#Partially deleted in new
chr4	176683537	176792727	chr4:176683537-176792727	3	-	176683925	176792311	0	7	503,334,107,152,191,214,563,	0,3649,4283,27961,44240,45995,108627,
#Partially deleted in new
chr4	176689299	176729592	chr4:176689299-176729592	0	-	176689299	176689299	8553170	4	356,152,191,60,	0,22199,38478,40233,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	176866613	176875457	chr4:176866613-176875457	3	-	176866613	176866613	8553170	3	300,79,49,	0,8562,8795,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	176875701	176880605	chr4:176875701-176880605	3	+	176875701	176875701	789624	2	152,539,	0,4365,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	177181441	177181741	chr4:177181441-177181741	3	+	177181441	177181441	8553170	1	300,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	177242538	177248773	chr4:177242538-177248773	3	-	177242538	177242538	8553170	4	165,93,112,51,	0,3489,5657,6184,
#Partially deleted in new
chr4	177309835	177362943	chr4:177309835-177362943	3	+	177309953	177362471	789624	10	274,122,135,214,75,167,170,421,175,655,	0,12623,25852,26272,29947,31640,41544,43472,50667,52453,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	177309902	177354279	chr4:177309902-177354279	0	+	177309953	177335723	789624	4	207,135,214,972,	0,25785,26205,43405,
#Partially deleted in new
chr4	177343003	177357032	chr4:177343003-177357032	3	-	177343003	177343003	8553170	2	715,38,	0,13991,
#Partially deleted in new
chr4	177430769	177442503	chr4:177430769-177442503	3	-	177431707	177442375	0	9	1039,134,108,76,115,113,113,154,255,	0,2444,3612,5506,6635,7975,8806,9503,11479,
#Partially deleted in new
chr4	177433260	177439624	chr4:177433260-177439624	0	-	177433260	177439624	789624	5	87,100,115,113,49,	0,1121,4144,5484,6315,
#Partially deleted in new
chr4	177434383	177442409	chr4:177434383-177442409	0	-	177434383	177434383	8553170	6	106,115,113,113,154,161,	0,3021,4361,5192,5889,7865,
#Partially deleted in new
chr4	177434439	177439665	chr4:177434439-177439665	0	-	177434439	177439665	789624	5	42,54,115,113,90,	0,1858,2965,4305,5136,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	177437067	177442409	chr4:177437067-177442409	0	-	177437067	177437067	8553170	4	452,113,154,161,	0,1677,3205,5181,
#Partially deleted in new
chr4	177440041	177442409	chr4:177440041-177442409	0	-	177440041	177440041	8553170	2	385,161,	0,2207,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	177457110	177457228	chr4:177457110-177457228	3	-	177457110	177457110	8553170	1	118,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	177457110	177457228	chr4:177457110-177457228	7	-	177457110	177457110	16724991	1	118,	0,
#Partially deleted in new
chr4	177686672	177691068	chr4:177686672-177691068	3	-	177686672	177686672	8553170	2	191,64,	0,4332,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	177728756	177990750	chr4:177728756-177990750	3	+	177728756	177728756	789624	6	261,113,144,104,140,272,	0,3610,232005,237918,247047,261722,
#Partially deleted in new
chr4	177812615	177907878	chr4:177812615-177907878	1	-	177812615	177812615	8553170	2	443,135,	0,95128,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	177903383	177907936	chr4:177903383-177907936	1	-	177903383	177903383	789624	2	565,193,	0,4360,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	178116720	178116861	chr4:178116720-178116861	3	-	178116720	178116720	8553170	1	141,	0,
#Deleted in new
chr4	178286694	178287285	chr4:178286694-178287285	7	+	178286694	178286694	16724991	1	591,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	178406694	178406830	chr4:178406694-178406830	7	+	178406694	178406694	16724991	1	136,	0,
#Partially deleted in new
chr4	178685885	178685956	chr4:178685885-178685956	3	-	178685885	178685885	8553170	1	71,	0,
#Deleted in new
chr4	179069436	179069594	chr4:179069436-179069594	7	+	179069436	179069436	16724991	1	158,	0,
#Partially deleted in new
chr4	179389133	179465305	chr4:179389133-179465305	3	-	179389133	179389133	8553170	3	368,60,111,	0,896,76061,
#Partially deleted in new
chr4	179856852	179857581	chr4:179856852-179857581	7	+	179856852	179856852	16724991	2	258,162,	0,567,
#Deleted in new
chr4	180573463	180574027	chr4:180573463-180574027	7	-	180573463	180573463	16724991	1	564,	0,
#Partially deleted in new
chr4	181064088	181159149	chr4:181064088-181159149	3	-	181064088	181064088	789624	3	392,127,74,	0,91524,94987,
#Deleted in new
chr4	181237357	181237564	chr4:181237357-181237564	7	-	181237357	181237357	16724991	1	207,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	181261160	181265029	chr4:181261160-181265029	3	-	181261160	181261160	8553170	2	408,85,	0,3784,
#Deleted in new
chr4	181522665	181523001	chr4:181522665-181523001	7	+	181522665	181522665	16724991	1	336,	0,
#Partially deleted in new
chr4	181820018	181829973	chr4:181820018-181829973	3	-	181820018	181820018	789624	3	277,74,50,	0,1537,9905,
#Deleted in new
chr4	181834864	181835108	chr4:181834864-181835108	3	-	181834864	181834864	8553170	1	244,	0,
#Partially deleted in new
chr4	181874437	182144195	chr4:181874437-182144195	3	-	181874437	181874437	8553170	5	108,78,158,71,149,	0,2606,138224,207318,269609,
#Deleted in new
chr4	181905789	181906467	chr4:181905789-181906467	7	-	181905789	181905789	16724991	1	678,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	181975155	182085136	chr4:181975155-182085136	1	-	181975155	181975155	8553170	5	1381,236,158,71,283,	0,4986,37506,106600,109698,
#Partially deleted in new
chr4	182079628	182085084	chr4:182079628-182085084	0	-	182079628	182079628	8553170	3	248,71,231,	0,2127,5225,
#Deleted in new
chr4	182141185	182144500	chr4:182141185-182144500	1	-	182141185	182141185	789624	5	299,108,142,94,162,	0,2252,2517,2861,3153,
#Deleted in new
chr4	182141649	182144466	chr4:182141649-182144466	1	-	182141649	182141649	789624	4	1896,142,94,128,	0,2053,2397,2689,
#Deleted in new
chr4	182142382	182143776	chr4:182142382-182143776	0	-	182142382	182142382	8553170	3	757,108,74,	0,1055,1320,
#Deleted in new
chr4	182143177	182143888	chr4:182143177-182143888	0	-	182143177	182143177	8553170	2	368,186,	0,525,
#Deleted in new
chr4	182143490	182145249	chr4:182143490-182145249	0	-	182143490	182143490	8553170	4	55,142,94,296,	0,212,556,1463,
#Partially deleted in new
chr4	182143986	182350316	chr4:182143986-182350316	0	+	182143986	182143986	8553170	4	175,307,279,476,	0,179959,202664,205854,
#Partially deleted in new
chr4	182144689	182346929	chr4:182144689-182346929	0	+	182324020	182346929	789624	3	65,307,279,	0,179256,201961,
#Partially deleted in new
chr4	182144851	182190382	chr4:182144851-182190382	3	+	182144851	182144851	8553170	2	120,166,	0,45365,
#Deleted in new
chr4	182169292	182169378	chr4:182169292-182169378	3	+	182169292	182169292	5263520	1	86,	0,
#Partially deleted in new
chr4	182243428	182803024	chr4:182243428-182803024	3	+	182324020	182800351	789624	28	48,307,279,238,239,123,215,211,102,195,201,186,147,217,120,262,268,144,250,233,155,875,176,236,297,1612,131,3429,	0,80517,103222,357495,385222,410342,429576,436237,436819,437114,438385,444737,470658,485536,486771,487449,493379,494972,499741,508371,510021,510956,530043,531489,545664,548845,553208,556167,
#Partially deleted in new
chr4	182448998	182628875	chr4:182448998-182628875	0	+	182448998	182628875	789624	3	85,238,225,	0,151925,179652,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	182548658	182548779	chr4:182548658-182548779	3	+	182548658	182548658	8553170	1	121,	0,
#Deleted in new
chr4	182631453	182631688	chr4:182631453-182631688	3	-	182631453	182631453	8553170	1	235,	0,
#Partially deleted in new
chr4	182680323	182755353	chr4:182680323-182755353	0	+	182680323	182680323	8553170	15	26,195,201,186,147,217,120,262,268,144,250,21,233,155,969,	0,219,1490,7842,33763,48641,49876,50554,56484,58077,62846,63819,71476,73126,74061,
#Deleted in new
chr4	182680371	182681916	chr4:182680371-182681916	0	+	182680371	182680371	8553170	2	366,103,	0,1442,
#Partially deleted in new
chr4	182697901	182708042	chr4:182697901-182708042	3	-	182697901	182697901	8553170	2	231,287,	0,9854,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	182772564	182773931	chr4:182772564-182773931	3	-	182772564	182772564	8553170	2	42,402,	0,965,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	182881776	182882203	chr4:182881776-182882203	3	-	182881776	182881776	8553170	1	427,	0,
#Partially deleted in new
chr4	182890059	182917369	chr4:182890059-182917369	0	-	182894587	182915568	789624	5	1418,97,117,115,82,	0,2971,4429,25401,27228,
#Partially deleted in new
chr4	182890103	182917379	chr4:182890103-182917379	1	-	182891398	182917313	0	6	1374,97,117,136,115,92,	0,2927,4385,24819,25357,27184,
#Partially deleted in new
chr4	182890254	182917594	chr4:182890254-182917594	3	-	182891398	182915568	0	6	1223,97,117,136,115,284,	0,2776,4234,24668,25206,27056,
#Partially deleted in new
chr4	182890254	182917361	chr4:182890254-182917361	0	-	182916725	182917313	789624	7	1223,97,117,136,115,135,51,	0,2776,4234,24668,25206,26468,27056,
#Partially deleted in new
chr4	182891013	182917396	chr4:182891013-182917396	0	-	182894587	182915568	789624	5	464,97,117,115,86,	0,2017,3475,24447,26297,
#Partially deleted in new
chr4	182891371	182917389	chr4:182891371-182917389	1	-	182891398	182915568	0	7	106,97,117,136,115,121,102,	0,1659,3117,23551,24089,25047,25916,
#Partially deleted in new
chr4	182891428	182917936	chr4:182891428-182917936	0	-	182891428	182915568	789624	6	49,97,117,136,115,64,	0,1602,3060,23494,24032,26444,
#Partially deleted in new
chr4	182894488	182916896	chr4:182894488-182916896	0	-	182894488	182915568	789624	4	117,136,115,224,	0,20434,20972,22184,
#Partially deleted in new
chr4	182894492	182917477	chr4:182894492-182917477	0	-	182894492	182915568	789624	6	113,136,115,8,121,190,	0,20430,20968,21388,21926,22795,
#Partially deleted in new
chr4	182894553	182916627	chr4:182894553-182916627	0	-	182894553	182915568	789624	4	52,136,115,342,	0,20369,20907,21732,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	182911222	182915560	chr4:182911222-182915560	0	-	182911222	182911222	8553170	3	281,136,100,	0,3700,4238,
#Deleted in new
chr4	182914922	182917345	chr4:182914922-182917345	0	-	182916829	182917313	789624	5	136,115,121,185,58,	0,538,1496,1750,2365,
#Deleted in new
chr4	182914945	182917219	chr4:182914945-182917219	0	-	182914945	182915568	789624	4	113,115,121,547,	0,515,1473,1727,
#Deleted in new
chr4	182914982	182917377	chr4:182914982-182917377	0	-	182916725	182917313	789624	5	76,115,121,185,67,	0,478,1436,1690,2328,
#Deleted in new
chr4	182914987	182917378	chr4:182914987-182917378	0	-	182916725	182917313	789624	6	71,115,8,121,185,68,	0,473,893,1431,1685,2323,
#Deleted in new
chr4	182914989	182917253	chr4:182914989-182917253	0	-	182914989	182915568	789624	5	69,115,8,254,581,	0,471,891,1296,1683,
#Deleted in new
chr4	182915497	182917443	chr4:182915497-182917443	0	-	182915497	182915568	789624	3	78,121,133,	0,921,1813,
#Partially deleted in new
chr4	183028600	183029720	chr4:183028600-183029720	7	-	183028600	183028600	16724991	2	466,357,	0,763,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	183037664	183040119	chr4:183037664-183040119	7	+	183037664	183037664	16724991	1	2455,	0,
#Partially deleted in new
chr4	183037766	183039138	chr4:183037766-183039138	5	+	183037766	183037766	16724991	2	436,441,	0,931,
#Deleted in new
chr4	183075479	183076033	chr4:183075479-183076033	3	-	183075479	183075479	8553170	1	554,	0,
#Partially deleted in new
chr4	183094422	183095056	chr4:183094422-183095056	3	-	183094422	183094422	8553170	1	634,	0,
#Deleted in new
chr4	183097016	183099199	chr4:183097016-183099199	3	-	183097016	183097016	789624	1	2183,	0,
#Partially deleted in new
chr4	183099292	183320777	chr4:183099292-183320777	3	+	183099491	183315729	789624	23	330,110,204,77,80,130,147,74,243,90,623,130,81,87,193,162,122,199,165,93,243,128,5115,	0,94306,108660,109656,140890,146123,149421,150627,154464,160346,161617,165685,166395,166572,169678,171787,181483,183415,184933,186674,190100,213048,216370,
#Partially deleted in new
chr4	183099338	183245545	chr4:183099338-183245545	0	+	183099491	183240187	789624	4	284,110,80,130,	0,94260,140844,146077,
#Partially deleted in new
chr4	183099491	183318434	chr4:183099491-183318434	1	+	183099491	183315729	789624	23	131,110,204,77,80,130,147,74,243,90,623,130,81,87,193,162,194,199,165,93,243,128,2772,	0,94107,108461,109457,140691,145924,149222,150428,154265,160147,161418,165486,166196,166373,169479,171588,181284,183216,184734,186475,189901,212849,216171,
#Partially deleted in new
chr4	183099491	183317184	chr4:183099491-183317184	1	+	183099491	183315729	789624	23	131,110,204,77,80,130,147,74,243,90,476,130,81,87,193,162,122,199,165,93,243,128,1522,	0,94107,108461,109457,140691,145924,149222,150428,154265,160147,161418,165486,166196,166373,169479,171588,181284,183216,184734,186475,189901,212849,216171,
#Partially deleted in new
chr4	183193614	183318750	chr4:183193614-183318750	0	+	183208005	183245421	789624	21	94,204,77,130,147,74,243,90,623,130,81,87,193,162,122,199,165,93,243,128,3088,	0,14338,15334,51801,55099,56305,60142,66024,67295,71363,72073,72250,75356,77465,87161,89093,90611,92352,95778,118726,122048,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr4	183203515	183315898	chr4:183203515-183315898	0	+	183208005	183269496	789624	24	88,204,77,80,130,147,74,243,90,623,130,81,87,148,185,89,162,122,199,165,93,243,128,236,	0,4437,5433,36667,41900,45198,46404,50241,56123,57394,61462,62172,62349,65455,65903,66246,67564,77260,79192,80710,82451,85877,108825,112147,
#Partially deleted in new
chr4	183208978	183318303	chr4:183208978-183318303	1	+	183253757	183315729	789624	16	47,243,90,623,130,81,87,193,162,122,199,165,93,243,128,2641,	0,44778,50660,51931,55999,56709,56886,59992,62101,71797,73729,75247,76988,80414,103362,106684,
#Partially deleted in new
chr4	183233627	183240634	chr4:183233627-183240634	3	-	183233627	183233627	789624	2	293,111,	0,6896,
#Partially deleted in new
chr4	183265868	183270038	chr4:183265868-183270038	0	+	183265868	183265868	8553170	3	83,193,277,	0,3102,3893,
#Partially deleted in new
chr4	183271211	183281386	chr4:183271211-183281386	0	+	183271211	183271211	8553170	2	30,611,	0,9564,
#Partially deleted in new
chr4	183282606	183315949	chr4:183282606-183315949	1	+	183282639	183315729	789624	6	300,165,93,243,128,287,	0,1619,3360,6786,29734,33056,
#Deleted in new
chr4	183318193	183320774	chr4:183318193-183320774	3	-	183319555	183320218	789624	1	2581,	0,
#Deleted in new
chr4	183321763	183322426	chr4:183321763-183322426	3	-	183321763	183322426	789624	1	663,	0,
#Deleted in new
chr4	183380344	183381705	chr4:183380344-183381705	7	+	183380344	183380344	16724991	1	1361,	0,
#Deleted in new
chr4	183418889	183419805	chr4:183418889-183419805	7	-	183418889	183418889	16724991	1	916,	0,
#Deleted in new
chr4	183444590	183448198	chr4:183444590-183448198	3	+	183444797	183447427	789624	3	479,131,2111,	0,944,1497,
#Deleted in new
chr4	183444634	183448198	chr4:183444634-183448198	1	+	183444797	183446096	789624	3	435,100,2111,	0,900,1453,
#Deleted in new
chr4	183444696	183446021	chr4:183444696-183446021	1	+	183444797	183445670	789624	2	373,487,	0,838,
#Deleted in new
chr4	183445175	183446759	chr4:183445175-183446759	0	+	183445175	183445175	8553170	3	116,100,672,	0,359,912,
#Deleted in new
chr4	183446140	183447929	chr4:183446140-183447929	0	+	183446140	183446140	8553170	2	207,140,	0,1649,
#Partially deleted in new
chr4	183483489	183484185	chr4:183483489-183484185	7	+	183483489	183483489	16724991	1	696,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	183494937	183504494	chr4:183494937-183504494	3	-	183494937	183494937	5263520	3	130,110,319,	0,2622,9238,
#Partially deleted in new
chr4	183504993	183511096	chr4:183504993-183511096	3	+	183505195	183510952	789624	2	374,815,	0,5288,
#Partially deleted in new
chr4	183506081	183510643	chr4:183506081-183510643	0	+	183506266	183510643	789624	2	237,362,	0,4200,
#Deleted in new
chr4	183516893	183517527	chr4:183516893-183517527	3	+	183516893	183516893	8553170	1	634,	0,
#Partially deleted in new
chr4	183639634	183659225	chr4:183639634-183659225	3	-	183641435	183658952	789624	8	1834,3,50,118,148,110,81,297,	0,6716,6853,9816,11349,11583,16246,19294,
#Partially deleted in new
chr4	183639635	183659178	chr4:183639635-183659178	1	-	183641435	183658952	789624	7	1833,50,118,148,110,81,250,	0,6852,9815,11348,11582,16245,19293,
#Partially deleted in new
chr4	183640459	183659151	chr4:183640459-183659151	1	-	183641435	183651061	789624	6	1009,3,50,118,148,223,	0,5891,6028,8991,10524,18469,
#Partially deleted in new
chr4	183640627	183659201	chr4:183640627-183659201	0	-	183651293	183658952	789624	8	841,3,50,118,148,106,81,273,	0,5723,5860,8823,10356,10590,15253,18301,
#Partially deleted in new
chr4	183640728	183659156	chr4:183640728-183659156	1	-	183641435	183651243	789624	7	740,3,50,118,148,106,228,	0,5622,5759,8722,10255,10489,18200,
#Partially deleted in new
chr4	183641338	183659203	chr4:183641338-183659203	0	-	183651074	183658952	789624	7	130,3,50,118,148,81,275,	0,5012,5149,8112,9645,14542,17590,
#Partially deleted in new
chr4	183651279	183656096	chr4:183651279-183656096	0	-	183651279	183655961	789624	2	48,216,	0,4601,
#Deleted in new
chr4	183653571	183653676	chr4:183653571-183653676	3	-	183653571	183653571	8553170	1	105,	0,
#Partially deleted in new
chr4	183659266	183713592	chr4:183659266-183713592	3	+	183663867	183712644	789624	30	181,225,170,71,115,100,74,97,134,148,94,80,79,55,146,62,133,131,156,188,149,122,120,66,157,112,92,134,168,993,	0,4580,6990,7793,8736,15446,15897,18191,20086,20853,23465,24708,24878,25038,25429,25817,26004,27351,32049,33693,34322,34650,35337,38236,38412,42430,45712,47540,49140,53333,
#Partially deleted in new
chr4	183659266	183713594	chr4:183659266-183713594	1	+	183663867	183712622	789624	31	181,225,170,71,115,100,74,97,134,148,94,80,79,55,146,62,133,131,156,188,149,122,120,66,157,112,92,134,10,39,995,	0,4580,6990,7793,8736,15446,15897,18191,20086,20853,23465,24708,24878,25038,25429,25817,26004,27351,32049,33693,34322,34650,35337,38236,38412,42430,45712,47540,49140,49269,53333,
#Partially deleted in new
chr4	183659322	183666378	chr4:183659322-183666378	0	+	183659322	183659322	8553170	3	125,225,153,	0,4524,6903,
#Partially deleted in new
chr4	183659375	183713023	chr4:183659375-183713023	0	+	183663867	183686741	789624	19	72,183,60,94,32,34,156,188,149,122,120,66,157,112,92,134,10,39,424,	0,4471,20832,23356,24599,27339,31940,33584,34213,34541,35228,38127,38303,42321,45603,47431,49031,49160,53224,
#Partially deleted in new
chr4	183664016	183674849	chr4:183664016-183674849	0	+	183664016	183664016	8553170	5	55,170,71,115,137,	0,2240,3043,3986,10696,
#Partially deleted in new
chr4	183666892	183677475	chr4:183666892-183677475	0	+	183666892	183666892	8553170	5	238,115,100,74,18,	0,1110,7820,8271,10565,
#Partially deleted in new
chr4	183666955	183677538	chr4:183666955-183677538	0	+	183666955	183666955	8553170	6	28,71,156,158,74,81,	0,104,1006,7757,8208,10502,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	183675602	183675715	chr4:183675602-183675715	3	-	183675602	183675602	8553170	1	113,	0,
#Partially deleted in new
chr4	183683848	183712869	chr4:183683848-183712869	1	+	183683949	183712644	789624	19	206,79,55,146,62,133,131,156,188,149,122,120,66,157,112,92,134,168,270,	0,296,456,847,1235,1422,2769,7467,9111,9740,10068,10755,13654,13830,17848,21130,22958,24558,28751,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	183700852	183713591	chr4:183700852-183713591	0	+	183700852	183700852	8553170	5	956,92,134,168,992,	0,4126,5954,7554,11747,
#Partially deleted in new
chr4	183701659	183706940	chr4:183701659-183706940	0	+	183701659	183701659	8553170	3	149,92,154,	0,3319,5127,
#Deleted in new
chr4	183705930	183706031	chr4:183705930-183706031	3	+	183705930	183705930	8553170	1	101,	0,
#Partially deleted in new
chr4	183762114	183765721	chr4:183762114-183765721	3	-	183762114	183762114	8553170	2	256,270,	0,3337,
#Partially deleted in new
chr4	183797691	184017378	chr4:183797691-184017378	1	+	183797691	184017159	789624	3	364,153,290,	0,203633,219397,
#Partially deleted in new
chr4	183853430	184001407	chr4:183853430-184001407	0	+	183853430	183853430	8553170	2	413,83,	0,147894,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	183905355	184023526	chr4:183905355-184023526	3	+	183906790	184017284	789624	4	1601,153,2266,6438,	0,95969,103802,111733,
#Partially deleted in new
chr4	183960258	184009490	chr4:183960258-184009490	0	+	183960258	184001414	789624	3	32,153,333,	0,41066,48899,
#Deleted in new
chr4	183987677	183988750	chr4:183987677-183988750	3	+	183987677	183987677	8553170	3	253,316,53,	0,598,1020,
#Partially deleted in new
chr4	184010772	184017443	chr4:184010772-184017443	0	+	184010772	184011593	789624	3	651,49,355,	0,814,6316,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	184014034	184016382	chr4:184014034-184016382	3	+	184014034	184014034	8553170	1	2348,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	184072402	184073039	chr4:184072402-184073039	7	+	184072402	184072402	16724991	1	637,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	184088705	184217961	chr4:184088705-184217961	3	-	184091176	184217819	789624	8	2677,124,138,180,142,112,180,383,	0,8539,23966,28150,29053,35455,64848,128873,
#Partially deleted in new
chr4	184112591	184117821	chr4:184112591-184117821	0	-	184112591	184112591	8553170	3	218,180,63,	0,4264,5167,
#Deleted in new
chr4	184216561	184217702	chr4:184216561-184217702	0	-	184216561	184216561	8553170	2	442,124,	0,1017,
#Deleted in new
chr4	184254508	184255330	chr4:184254508-184255330	7	+	184254508	184254508	16724991	1	822,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	184278935	184279233	chr4:184278935-184279233	3	+	184278935	184278935	8553170	1	298,	0,
#Deleted in new
chr4	184299128	184299640	chr4:184299128-184299640	7	-	184299128	184299128	16724991	1	512,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	184340755	184353977	chr4:184340755-184353977	3	-	184340755	184340755	789624	3	1298,190,665,	0,9333,12557,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	184341689	184347912	chr4:184341689-184347912	0	-	184341689	184341689	8553170	2	364,200,	0,6023,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	184365182	184369870	chr4:184365182-184369870	1	-	184365182	184365182	8553170	3	464,122,1458,	0,643,3230,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	184365560	184382264	chr4:184365560-184382264	3	-	184365560	184365560	789624	6	86,122,139,142,104,131,	0,265,6108,6778,10880,16573,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	184372406	184382306	chr4:184372406-184382306	1	-	184372406	184372406	8553170	4	74,104,165,173,	0,4034,6558,9727,
#Partially deleted in new
chr4	184387712	184474580	chr4:184387712-184474580	3	-	184388757	184429064	789624	9	1354,47,165,118,47,177,100,93,202,	0,2990,11202,20445,30454,30819,31756,41265,86666,
#Partially deleted in new
chr4	184389021	184418590	chr4:184389021-184418590	0	-	184389021	184418590	789624	7	45,47,165,105,118,47,59,	0,1681,9893,18157,19136,29145,29510,
#Partially deleted in new
chr4	184389039	184418631	chr4:184389039-184418631	0	-	184389039	184418631	789624	4	27,47,165,100,	0,1663,9875,29492,
#Partially deleted in new
chr4	184408157	184474049	chr4:184408157-184474049	0	-	184408157	184429064	789624	6	118,47,177,100,93,60,	0,10009,10374,11311,20820,65832,
#Partially deleted in new
chr4	184408158	184474548	chr4:184408158-184474548	0	-	184408158	184408158	8553170	6	117,47,204,100,93,170,	0,10008,10346,11310,20819,66220,
#Partially deleted in new
chr4	184408204	184474048	chr4:184408204-184474048	0	-	184408204	184429064	789624	6	71,47,177,100,93,80,	0,9962,10327,11264,20773,65764,
#Partially deleted in new
chr4	184418166	184474186	chr4:184418166-184474186	0	-	184418166	184429064	789624	5	47,177,100,93,81,	0,365,1302,10811,55939,
#Deleted in new
chr4	184431965	184432049	chr4:184431965-184432049	3	+	184431965	184431965	8553170	1	84,	0,
#Partially deleted in new
chr4	184448655	184474548	chr4:184448655-184474548	0	-	184448655	184448655	8553170	2	395,170,	0,25723,
#Deleted in new
chr4	184471923	184472609	chr4:184471923-184472609	3	-	184471923	184471923	8553170	1	686,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	184474801	184477304	chr4:184474801-184477304	3	+	184474801	184474801	8553170	1	2503,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	184506459	184537554	chr4:184506459-184537554	3	-	184506459	184506459	789624	3	917,89,53,	0,2777,31042,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	184506917	184509688	chr4:184506917-184509688	0	-	184506917	184506917	8553170	3	459,89,193,	0,2319,2578,
#Deleted in new
chr4	184559174	184559783	chr4:184559174-184559783	7	-	184559174	184559174	16724991	1	609,	0,
#Partially deleted in new
chr4	184584092	184625030	chr4:184584092-184625030	3	-	184584092	184584092	789624	2	510,292,	0,40646,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	184618888	184624879	chr4:184618888-184624879	1	-	184618888	184618888	789624	3	429,37,141,	0,4533,5850,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	184619045	184624942	chr4:184619045-184624942	0	-	184619045	184619045	8553170	2	269,204,	0,5693,
#Partially deleted in new
chr4	184627695	184649475	chr4:184627695-184649475	1	-	184629271	184638453	0	8	1806,121,176,129,125,68,167,81,	0,3341,4069,4572,7598,10705,20769,21699,
#Partially deleted in new
chr4	184627695	184648592	chr4:184627695-184648592	1	-	184629435	184638453	789624	7	1806,176,129,125,68,192,128,	0,4069,4572,7598,10705,16835,20769,
#Partially deleted in new
chr4	184627695	184649509	chr4:184627695-184649509	3	-	184629271	184638453	0	7	1806,121,176,129,125,68,115,	0,3341,4069,4572,7598,10705,21699,
#Partially deleted in new
chr4	184629255	184649447	chr4:184629255-184649447	1	-	184629435	184638453	789624	7	246,176,129,125,68,167,53,	0,2509,3012,6038,9145,19209,20139,
#Partially deleted in new
chr4	184629383	184649455	chr4:184629383-184649455	1	-	184629435	184638453	789624	6	118,176,129,125,68,61,	0,2381,2884,5910,9017,20011,
#Partially deleted in new
chr4	184631895	184649447	chr4:184631895-184649447	0	-	184631895	184638453	789624	6	45,129,125,68,129,53,	0,372,3398,6505,16607,17499,
#Partially deleted in new
chr4	184649612	184694952	chr4:184649612-184694952	3	+	184657140	184694779	0	14	296,78,239,98,130,148,288,163,89,90,109,83,47,431,	0,2410,7469,9727,12161,16304,22560,28619,32635,35796,35963,41886,42053,44909,
#Partially deleted in new
chr4	184649666	184694963	chr4:184649666-184694963	1	+	184661882	184694779	789624	13	242,78,98,130,148,288,163,89,90,109,83,47,442,	0,2356,9673,12107,16250,22506,28565,32581,35742,35909,41832,41999,44855,
#Partially deleted in new
chr4	184649694	184694916	chr4:184649694-184694916	1	+	184657140	184694779	0	14	214,78,236,98,130,148,288,163,89,90,109,83,47,395,	0,2328,7390,9645,12079,16222,22478,28537,32553,35714,35881,41804,41971,44827,
#Partially deleted in new
chr4	184649724	184694952	chr4:184649724-184694952	1	+	184657140	184694779	0	14	184,78,239,98,130,148,288,163,89,87,109,83,47,431,	0,2298,7357,9615,12049,16192,22448,28507,32523,35687,35851,41774,41941,44797,
#Partially deleted in new
chr4	184649737	184694952	chr4:184649737-184694952	0	+	184657140	184672176	789624	10	171,78,239,98,288,87,109,83,47,431,	0,2285,7344,9602,22435,35674,35838,41761,41928,44784,
#Partially deleted in new
chr4	184649755	184657654	chr4:184649755-184657654	0	+	184649755	184649755	8553170	3	153,78,573,	0,2267,7326,
#Partially deleted in new
chr4	184649776	184678386	chr4:184649776-184678386	0	+	184657140	184665977	789624	7	132,78,239,98,148,288,155,	0,2246,7305,9563,16140,22396,28455,
#Partially deleted in new
chr4	184649780	184672268	chr4:184649780-184672268	0	+	184657140	184665977	789624	6	128,78,236,98,148,96,	0,2242,7304,9559,16136,22392,
#Partially deleted in new
chr4	184678276	184694592	chr4:184678276-184694592	0	+	184678276	184694592	789624	6	118,90,109,83,47,71,	0,7132,7299,13222,13389,16245,
#Partially deleted in new
chr4	184691367	184694758	chr4:184691367-184694758	0	+	184691367	184691367	8553170	3	214,47,237,	0,298,3154,
#Deleted in new
chr4	184694292	184694952	chr4:184694292-184694952	0	+	184694292	184694292	8553170	2	78,431,	0,229,
#Partially deleted in new
chr4	184694617	184734133	chr4:184694617-184734133	3	-	184695287	184734062	789624	13	784,157,62,48,79,109,70,237,61,106,118,49,118,	0,3029,6202,7471,7745,15454,18326,21779,22518,30339,34300,36302,39398,
#Partially deleted in new
chr4	184695001	184734130	chr4:184695001-184734130	0	-	184697764	184734062	789624	12	400,157,48,79,109,70,237,61,106,118,49,115,	0,2645,7087,7361,15070,17942,21395,22134,29955,33916,35918,39014,
#Partially deleted in new
chr4	184695128	184698096	chr4:184695128-184698096	0	-	184695128	184695128	8553170	2	273,450,	0,2518,
#Partially deleted in new
chr4	184695348	184702481	chr4:184695348-184702481	0	-	184695348	184695348	8553170	4	53,157,62,393,	0,2298,5471,6740,
#Partially deleted in new
chr4	184698193	184713941	chr4:184698193-184713941	0	-	184698193	184698193	8553170	7	125,48,79,109,81,70,73,	0,3895,4169,11878,12132,14750,15675,
#Partially deleted in new
chr4	184716396	184733414	chr4:184716396-184733414	0	-	184716396	184730928	789624	6	237,61,106,118,49,117,	0,739,8560,12521,14523,16901,
#Partially deleted in new
chr4	184755594	184826119	chr4:184755594-184826119	1	-	184757124	184776947	789624	20	1671,72,102,144,117,89,73,96,135,135,78,74,52,33,179,100,102,65,115,204,	0,2040,2224,4762,6812,7572,9258,10296,11027,12721,14804,17486,18068,18248,20889,21289,24737,28332,33022,70321,
#Partially deleted in new
chr4	184755595	184808601	chr4:184755595-184808601	1	-	184757124	184776947	789624	22	1670,72,102,144,117,89,73,96,135,135,78,74,52,33,179,100,102,65,135,115,227,310,	0,2039,2223,4761,6811,7571,9257,10295,11026,12720,14803,17485,18067,18247,20888,21288,24736,28331,32783,33021,47724,52696,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	184755599	184758876	chr4:184755599-184758876	0	-	184755599	184755599	8553170	3	1666,72,1058,	0,2035,2219,
#Partially deleted in new
chr4	184755599	184826818	chr4:184755599-184826818	3	-	184757124	184803514	789624	21	1666,72,102,144,117,89,73,96,135,135,78,74,52,33,179,100,102,65,115,227,294,	0,2035,2219,4757,6807,7567,9253,10291,11022,12716,14799,17481,18063,18243,20884,21284,24732,28327,33017,47720,70925,
#Partially deleted in new
chr4	184755600	184826094	chr4:184755600-184826094	1	-	184757124	184803514	789624	21	1665,72,102,144,117,89,73,96,135,135,78,74,52,33,179,100,102,65,115,227,179,	0,2034,2218,4756,6806,7566,9252,10290,11021,12715,14798,17480,18062,18242,20883,21283,24731,28326,33016,47719,70315,
#Partially deleted in new
chr4	184755600	184766702	chr4:184755600-184766702	0	-	184757124	184766702	789624	9	1665,72,102,144,87,89,73,96,81,	0,2034,2218,4756,6806,7566,9252,10290,11021,
#Partially deleted in new
chr4	184756780	184826034	chr4:184756780-184826034	1	-	184757124	184803514	789624	20	485,72,102,144,117,89,73,96,135,135,78,74,52,33,179,100,65,115,227,119,	0,854,1038,3576,5626,6386,8072,9110,9841,11535,13618,16300,16882,17062,19703,20103,27146,31836,46539,69135,
#Partially deleted in new
chr4	184756902	184808451	chr4:184756902-184808451	0	-	184788442	184803514	789624	22	363,72,102,144,117,89,73,96,135,135,78,74,52,33,179,100,102,65,135,115,227,160,	0,732,916,3454,5504,6264,7950,8988,9719,11413,13496,16178,16760,16940,19581,19981,23429,27024,31476,31714,46417,51389,
#Partially deleted in new
chr4	184757020	184812259	chr4:184757020-184812259	1	-	184757124	184803514	789624	21	245,72,102,144,117,89,73,96,135,135,78,74,52,33,179,100,102,65,115,227,100,	0,614,798,3336,5386,6146,7832,8870,9601,11295,13378,16060,16642,16822,19463,19863,23311,26906,31596,46299,55139,
#Partially deleted in new
chr4	184757046	184805788	chr4:184757046-184805788	1	-	184757124	184803514	789624	21	219,72,102,144,117,89,73,96,135,135,78,74,52,33,179,100,102,65,115,227,262,	0,588,772,3310,5360,6120,7806,8844,9575,11269,13208,16034,16616,16796,19437,19837,23285,26880,31570,46273,48480,
#Partially deleted in new
chr4	184768029	184826052	chr4:184768029-184826052	1	-	184768276	184803514	789624	12	421,78,74,52,33,179,100,102,65,115,227,137,	0,2369,5051,5633,5813,8454,8854,12302,15897,20587,35290,57886,
#Partially deleted in new
chr4	184768327	184773873	chr4:184768327-184773873	0	-	184768327	184773873	789624	4	123,74,52,31,	0,4753,5335,5515,
#Deleted in new
chr4	184798295	184799046	chr4:184798295-184799046	7	-	184798295	184798295	16724991	1	751,	0,
#Deleted in new
chr4	184798511	184798891	chr4:184798511-184798891	5	-	184798511	184798511	16724991	1	380,	0,
#Partially deleted in new
chr4	184813618	184821300	chr4:184813618-184821300	3	+	184813618	184813618	8553170	3	290,81,257,	0,1399,7425,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	184844584	184855751	chr4:184844584-184855751	3	-	184844584	184844584	8553170	3	341,105,283,	0,5910,10884,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	184846277	184855682	chr4:184846277-184855682	1	-	184846277	184846277	8553170	3	257,105,214,	0,4217,9191,
#Deleted in new
chr4	184851012	184851110	chr4:184851012-184851110	3	-	184851012	184851012	5263520	1	98,	0,
#Partially deleted in new
chr4	184893870	184898764	chr4:184893870-184898764	3	-	184893870	184893870	8553170	3	270,220,144,	0,3477,4750,
#Partially deleted in new
chr4	184893900	184899454	chr4:184893900-184899454	0	-	184893900	184893900	789624	3	240,233,148,	0,3434,5406,
#Partially deleted in new
chr4	184893904	184899451	chr4:184893904-184899451	0	-	184893904	184893904	789624	3	236,220,145,	0,3443,5402,
#Partially deleted in new
chr4	184910888	184911352	chr4:184910888-184911352	7	-	184910888	184910888	16724991	1	464,	0,
#Partially deleted in new
chr4	184938382	184938440	chr4:184938382-184938440	3	-	184938382	184938382	5263520	1	58,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	184984276	184988127	chr4:184984276-184988127	3	-	184984276	184984276	8553170	1	3851,	0,
#Partially deleted in new
chr4	184988996	185005186	chr4:184988996-185005186	3	+	184988996	184988996	8553170	2	224,687,	0,15503,
#Partially deleted in new
chr4	185018840	185020804	chr4:185018840-185020804	1	+	185018928	185020772	789624	4	115,105,97,529,	0,546,906,1435,
#Partially deleted in new
chr4	185018840	185020802	chr4:185018840-185020802	0	+	185018840	185018840	8553170	3	115,457,527,	0,546,1435,
#Partially deleted in new
chr4	185018840	185020796	chr4:185018840-185020796	3	+	185018928	185020772	789624	4	115,105,97,524,	0,546,906,1432,
#Partially deleted in new
chr4	185018928	185020796	chr4:185018928-185020796	1	+	185018928	185020772	789624	4	159,105,220,524,	0,458,695,1344,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	185051895	185062816	chr4:185051895-185062816	0	+	185051895	185051895	8553170	4	41,84,363,360,	0,1209,3083,10561,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr4	185051895	185107248	chr4:185051895-185107248	3	+	185051895	185051895	789624	9	41,363,360,70,506,210,154,140,342,	0,3083,10561,18065,19672,33888,35649,44586,55011,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	185062456	185072073	chr4:185062456-185072073	0	+	185062456	185062456	8553170	5	360,87,119,120,506,	0,791,1989,7473,9111,
#Deleted in new
chr4	185064980	185065323	chr4:185064980-185065323	7	+	185064980	185064980	16724991	1	343,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	185143240	185150382	chr4:185143240-185150382	3	+	185143372	185146971	789624	4	243,487,141,3569,	0,1523,2518,3573,
#Partially deleted in new
chr4	185143277	185147241	chr4:185143277-185147241	0	+	185143372	185145383	789624	4	206,487,545,428,	0,1486,2077,3536,
#Partially deleted in new
chr4	185159664	185204001	chr4:185159664-185204001	3	-	185162797	185191196	789624	5	3261,151,266,1070,104,	0,4364,16121,30478,44233,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	185169025	185204028	chr4:185169025-185204028	1	-	185170298	185191196	789624	4	1315,266,1070,244,	0,6760,21117,34759,
#Partially deleted in new
chr4	185175799	185182519	chr4:185175799-185182519	0	-	185175799	185175799	8553170	2	252,342,	0,6378,
#Partially deleted in new
chr4	185190375	185203965	chr4:185190375-185203965	1	-	185190999	185191196	789624	3	672,163,68,	0,674,13522,
#Partially deleted in new
chr4	185190767	185209504	chr4:185190767-185209504	0	-	185190767	185191196	789624	3	445,57,180,	0,16967,18557,
#Partially deleted in new
chr4	185204236	185363971	chr4:185204236-185363971	3	+	185247356	185363465	789624	19	231,85,217,173,187,71,182,132,273,165,132,141,114,165,118,67,182,101,587,	0,43057,54611,60201,62732,83775,106398,116496,119291,128358,135142,137739,142300,147208,149248,153434,157687,158374,159148,
#Partially deleted in new
chr4	185204236	185363964	chr4:185204236-185363964	1	+	185310651	185363465	789624	18	231,85,217,173,187,71,182,132,273,165,132,141,114,118,67,182,101,580,	0,43057,54611,60201,62732,83775,106398,116496,119291,128358,135142,137739,142300,149248,153434,157687,158374,159148,
#Partially deleted in new
chr4	185210078	185363966	chr4:185210078-185363966	1	+	185247356	185363465	789624	19	177,85,217,173,187,71,182,132,273,165,132,141,114,165,118,67,182,101,582,	0,37215,48769,54359,56890,77933,100556,110654,113449,122516,129300,131897,136458,141366,143406,147592,151845,152532,153306,
#Partially deleted in new
chr4	185210160	185267028	chr4:185210160-185267028	0	+	185210160	185210160	8553170	5	95,85,217,61,60,	0,37133,48687,54277,56808,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr4	185295826	185363510	chr4:185295826-185363510	0	+	185295826	185295826	8553170	13	204,182,132,273,165,132,141,114,118,67,182,101,126,	0,14808,24906,27701,36768,43552,46149,50710,57658,61844,66097,66784,67558,
#Partially deleted in new
chr4	185320844	185370185	chr4:185320844-185370185	0	+	185320844	185339394	789624	12	20,273,119,132,141,114,165,118,67,182,101,436,	0,2683,11750,18534,21131,25692,30600,32640,36826,41079,41766,48905,
#Partially deleted in new
chr4	185353057	185362059	chr4:185353057-185362059	0	+	185353057	185353057	8553170	3	545,67,136,	0,4613,8866,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	185363878	185378998	chr4:185363878-185378998	1	-	185367179	185378186	789624	8	3367,175,224,106,143,114,110,918,	0,6761,8977,10256,10440,11734,13030,14202,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	185367062	185379018	chr4:185367062-185379018	1	-	185367179	185377046	789624	7	183,175,224,106,143,114,2110,	0,3577,5793,7072,7256,8550,9846,
#Partially deleted in new
chr4	185367063	185395899	chr4:185367063-185395899	3	-	185367179	185378186	789624	9	182,175,224,106,143,114,110,127,1121,	0,3576,5792,7071,7255,8549,9845,11017,27715,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	185370724	185390928	chr4:185370724-185390928	3	+	185370724	185370724	8553170	3	134,108,345,	0,233,19859,
#Partially deleted in new
chr4	185374331	185378847	chr4:185374331-185378847	0	-	185374331	185378186	789624	5	130,114,110,127,204,	0,1281,2577,3749,4312,
#Partially deleted in new
chr4	185396020	185399028	chr4:185396020-185399028	0	+	185396020	185396020	8553170	3	404,153,92,	0,1129,2916,
#Deleted in new
chr4	185396044	185397255	chr4:185396044-185397255	0	+	185396923	185397255	789624	3	380,119,106,	0,787,1105,
#Partially deleted in new
chr4	185396483	185400241	chr4:185396483-185400241	3	+	185396923	185400017	789624	5	467,153,92,204,225,	0,666,2453,3086,3533,
#Partially deleted in new
chr4	185396810	185400628	chr4:185396810-185400628	0	+	185396810	185396810	8553170	4	140,153,92,1059,	0,339,2126,2759,
#Partially deleted in new
chr4	185396840	185399743	chr4:185396840-185399743	0	+	185396840	185396840	8553170	4	110,153,82,174,	0,309,2106,2729,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	185396840	185397707	chr4:185396840-185397707	0	+	185396840	185396840	8553170	2	110,558,	0,309,
#Partially deleted in new
chr4	185399539	185425979	chr4:185399539-185425979	2	-	185418484	185425868	789624	12	939,125,77,125,165,147,193,158,67,159,79,114,	0,3954,6240,8396,8731,14186,15615,16170,18901,19072,22945,26326,
#Partially deleted in new
chr4	185400288	185425985	chr4:185400288-185425985	1	-	185400391	185425868	789624	12	190,125,77,125,165,147,193,158,67,184,79,120,	0,3205,5491,7647,7982,13437,14866,15421,18152,18298,22196,25577,
#Partially deleted in new
chr4	185400314	185406168	chr4:185400314-185406168	0	-	185400314	185400314	8553170	3	164,125,389,	0,3179,5465,
#Partially deleted in new
chr4	185400333	185425969	chr4:185400333-185425969	0	-	185405916	185425868	789624	12	145,125,180,125,165,147,193,158,67,184,79,104,	0,3160,5446,7602,7937,13392,14821,15376,18107,18253,22151,25532,
#Partially deleted in new
chr4	185400337	185418513	chr4:185400337-185418513	0	-	185400391	185418513	789624	9	141,125,77,125,120,147,193,158,73,	0,3156,5442,7598,7933,13388,14817,15372,18103,
#Partially deleted in new
chr4	185402261	185413742	chr4:185402261-185413742	0	-	185402261	185413742	789624	6	83,125,77,125,165,17,	0,1232,3518,5674,6009,11464,
#Partially deleted in new
chr4	185415283	185425930	chr4:185415283-185425930	0	-	185415809	185425868	789624	6	64,106,67,184,79,65,	0,426,3157,3303,7201,10582,
#Partially deleted in new
chr4	185415779	185422564	chr4:185415779-185422564	0	-	185415779	185415779	8553170	4	36,67,184,80,	0,2661,2807,6705,
#Partially deleted in new
chr4	185415810	185425978	chr4:185415810-185425978	0	-	185415810	185422548	789624	5	57,67,184,69,113,	0,2630,2776,6674,10055,
#Partially deleted in new
chr4	185426248	185436310	chr4:185426248-185436310	0	+	185429411	185436310	789624	5	148,181,220,138,27,	0,3082,5733,9797,10035,
#Partially deleted in new
chr4	185426248	185436359	chr4:185426248-185436359	0	+	185429411	185436359	789624	5	173,178,220,138,76,	0,3085,5733,9797,10035,
#Partially deleted in new
chr4	185426300	185449668	chr4:185426300-185449668	0	+	185429411	185436056	789624	6	96,178,138,180,167,73,	0,3033,9745,14239,18663,23295,
#Partially deleted in new
chr4	185429389	185449826	chr4:185429389-185449826	3	+	185429411	185449644	789624	7	122,220,138,76,180,167,231,	0,2592,6656,6894,11150,15574,20206,
#Partially deleted in new
chr4	185445181	185471759	chr4:185445181-185471759	3	-	185445501	185471683	789624	7	361,2113,111,66,56,105,86,	0,12944,15867,17461,17812,25763,26492,
#Partially deleted in new
chr4	185445181	185471694	chr4:185445181-185471694	1	-	185445501	185471683	789624	6	361,2113,66,56,105,21,	0,12944,17461,17812,25763,26492,
#Partially deleted in new
chr4	185445484	185458366	chr4:185445484-185458366	0	-	185457195	185458366	789624	3	58,168,241,	0,11677,12641,
#Partially deleted in new
chr4	185457745	185471744	chr4:185457745-185471744	1	-	185457765	185471683	789624	7	70,2113,111,66,56,105,71,	0,380,3303,4897,5248,13199,13928,
#Partially deleted in new
chr4	185459811	185471752	chr4:185459811-185471752	0	-	185461139	185471683	789624	5	427,111,66,105,79,	0,1237,2831,11133,11862,
#Partially deleted in new
chr4	185459873	185471699	chr4:185459873-185471699	0	-	185459873	185471683	789624	7	365,60,111,66,56,105,26,	0,1020,1175,2769,3120,11071,11800,
#Partially deleted in new
chr4	185459925	185471103	chr4:185459925-185471103	0	-	185459925	185462669	789624	5	313,111,66,56,159,	0,1123,2717,3068,11019,
#Partially deleted in new
chr4	185460031	185471104	chr4:185460031-185471104	0	-	185460031	185462669	789624	4	207,111,66,160,	0,1017,2611,10913,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	185461082	185471702	chr4:185461082-185471702	0	-	185470681	185471683	789624	6	77,66,56,137,105,29,	0,1560,1911,9497,9862,10591,
#Deleted in new
chr4	185471515	185472263	chr4:185471515-185472263	3	+	185471515	185471515	789624	2	245,149,	0,599,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr4	185500659	185535508	chr4:185500659-185535508	3	-	185502293	185535434	789624	8	1824,112,131,264,68,85,152,167,	0,3815,5862,7639,13610,22702,24360,34682,
#Partially deleted in new
chr4	185501696	185535507	chr4:185501696-185535507	1	-	185502293	185535434	789624	5	787,112,131,68,166,	0,2778,4825,12573,33645,
#Partially deleted in new
chr4	185501750	185535612	chr4:185501750-185535612	1	-	185502293	185535434	789624	7	733,112,131,188,85,152,271,	0,2724,4771,12952,21611,23269,33591,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	185501750	185517717	chr4:185501750-185517717	0	-	185501750	185501750	8553170	4	733,112,131,4161,	0,2724,4771,11806,
#Partially deleted in new
chr4	185501877	185535422	chr4:185501877-185535422	0	-	185514262	185535422	789624	7	606,112,131,781,85,152,81,	0,2597,4644,11679,21484,23142,33464,
#Partially deleted in new
chr4	185502089	185535507	chr4:185502089-185535507	1	-	185502293	185535434	789624	7	394,112,131,68,85,152,166,	0,2385,4432,12180,21272,22930,33252,
#Partially deleted in new
chr4	185502255	185507087	chr4:185502255-185507087	0	-	185502255	185502255	8553170	3	228,112,566,	0,2219,4266,
#Partially deleted in new
chr4	185502293	185535507	chr4:185502293-185535507	1	-	185523410	185535434	789624	7	190,112,131,264,68,85,166,	0,2181,4228,6005,11976,21068,33048,
#Partially deleted in new
chr4	185504544	185535466	chr4:185504544-185535466	0	-	185523410	185535434	789624	5	42,131,188,85,125,	0,1977,10158,18817,30797,
#Partially deleted in new
chr4	185508300	185535507	chr4:185508300-185535507	0	-	185523410	185535434	789624	4	262,68,85,166,	0,5969,15061,27041,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	185512093	185535491	chr4:185512093-185535491	0	-	185512093	185512093	8553170	5	2244,188,85,152,150,	0,2609,11268,12926,23248,
#Partially deleted in new
chr4	185514145	185535507	chr4:185514145-185535507	0	-	185514145	185514145	8553170	3	192,152,166,	0,10874,21196,
#Partially deleted in new
chr4	185514314	185525122	chr4:185514314-185525122	0	-	185514314	185514314	8553170	3	576,85,103,	0,9047,10705,
#Partially deleted in new
chr4	185523142	185535507	chr4:185523142-185535507	0	-	185523142	185523142	8553170	3	304,152,166,	0,1877,12199,
#Partially deleted in new
chr4	185585443	185956368	chr4:185585443-185956368	3	-	185587626	185662197	0	21	2245,107,50,201,129,115,47,89,1581,188,50,115,190,45,67,173,139,125,27,140,173,	0,4235,8442,26336,29387,29601,33141,34619,37470,41388,45105,61224,64023,66340,67218,71980,76660,92979,93352,189783,370752,
#Partially deleted in new
chr4	185585443	185656969	chr4:185585443-185656969	1	-	185587626	185656638	0	15	2245,107,50,201,129,115,47,89,1581,188,50,115,190,67,355,	0,4235,8442,26336,29387,29601,33141,34619,37470,41388,45105,61224,64023,67218,71171,
#Partially deleted in new
chr4	185585443	185810894	chr4:185585443-185810894	1	-	185587626	185690571	0	21	2245,107,50,201,129,115,47,89,188,50,57,115,190,45,67,173,139,125,27,50,147,	0,4235,8442,26336,29387,29601,33141,34619,41388,45105,49911,61224,64023,66340,67218,71980,76660,92979,93352,105118,225304,
#Partially deleted in new
chr4	185585443	185611980	chr4:185585443-185611980	0	-	185587626	185611980	8553170	5	2245,107,50,765,201,	0,4235,8442,21141,26336,
#Partially deleted in new
chr4	185587304	185811071	chr4:185587304-185811071	1	-	185587626	185684814	0	23	384,107,50,201,129,115,47,89,188,50,57,159,115,190,45,67,173,139,125,27,93,140,134,	0,2374,6581,24475,27526,27740,31280,32758,39527,43244,48050,51572,59363,62162,64479,65357,70119,74799,91118,91491,97449,187922,223633,
#Partially deleted in new
chr4	185587304	185775912	chr4:185587304-185775912	1	-	185587626	185677488	0	23	384,107,50,201,129,115,47,89,188,50,57,159,115,190,45,67,173,139,642,56,27,140,211,	0,2374,6581,24475,27526,27740,31280,32758,39527,43244,48050,51572,59363,62162,64479,65357,70119,74799,89692,91118,91491,187922,188397,
#Partially deleted in new
chr4	185587305	185812238	chr4:185587305-185812238	1	-	185587626	185684814	0	21	383,107,50,201,129,115,47,89,188,50,115,190,67,173,139,125,27,89,50,140,575,	0,2373,6580,24474,27525,27739,31279,32757,39526,43243,59362,62161,65356,70118,74798,91117,91490,97448,103256,187921,224358,
#Partially deleted in new
chr4	185587321	185956652	chr4:185587321-185956652	1	-	185587626	185690571	0	24	367,107,50,201,129,115,47,89,1581,188,50,115,190,45,67,173,139,125,27,93,50,140,77,457,	0,2357,6564,24458,27509,27723,31263,32741,35592,39510,43227,59346,62145,64462,65340,70102,74782,91101,91474,97432,103240,187905,306975,368874,
#Partially deleted in new
chr4	185587322	185812221	chr4:185587322-185812221	1	-	185587626	185690571	0	23	366,107,50,201,129,115,47,89,188,50,57,84,115,190,45,67,173,139,56,27,50,140,558,	0,2356,6563,24457,27508,27722,31262,32740,39509,43226,48032,50756,59345,62144,64461,65339,70101,74781,91100,91473,103239,187904,224341,
#Partially deleted in new
chr4	185587425	185589835	chr4:185587425-185589835	0	-	185587425	185587425	8553170	2	263,157,	0,2253,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	185587908	185594003	chr4:185587908-185594003	3	+	185587908	185587908	8553170	4	282,76,172,1259,	0,1245,3996,4836,
#Partially deleted in new
chr4	185593883	185775288	chr4:185593883-185775288	0	-	185593883	185690571	789624	20	52,201,129,115,47,89,188,50,57,159,115,190,45,67,173,139,56,27,50,62,	0,17896,20947,21161,24701,26179,32948,36665,41471,44993,52784,55583,57900,58778,63540,68220,84539,84912,96678,181343,
#Partially deleted in new
chr4	185607015	185656969	chr4:185607015-185656969	0	-	185607015	185607015	8553170	14	334,201,129,115,47,89,188,50,57,159,115,190,67,355,	0,4764,7815,8029,11569,13047,19816,23533,28339,31861,39652,42451,45646,49599,
#Deleted in new
chr4	185614625	185615222	chr4:185614625-185615222	0	-	185614625	185614625	8553170	2	334,178,	0,419,
#Partially deleted in new
chr4	185614887	185649606	chr4:185614887-185649606	0	-	185614887	185649606	789624	9	72,115,47,89,188,50,57,115,140,	0,157,3697,5175,11944,15661,20467,31780,34579,
#Partially deleted in new
chr4	185618601	185657520	chr4:185618601-185657520	0	-	185618601	185657520	789624	9	30,89,188,50,115,190,45,67,97,	0,1461,8230,11947,28066,30865,33182,34060,38822,
#Deleted in new
chr4	185624241	185626909	chr4:185624241-185626909	0	-	185624241	185624241	8553170	2	216,78,	0,2590,
#Partially deleted in new
chr4	185626831	185652688	chr4:185626831-185652688	0	-	185626831	185652688	789624	7	188,35,159,115,190,45,27,	0,3717,12045,19836,22635,24952,25830,
#Partially deleted in new
chr4	185626850	185656746	chr4:185626850-185656746	0	-	185626850	185626850	8553170	6	169,50,115,190,67,132,	0,3698,19817,22616,25811,29764,
#Partially deleted in new
chr4	185626923	185656684	chr4:185626923-185656684	0	-	185626923	185626923	8553170	6	96,50,83,190,67,70,	0,3625,19776,22543,25738,29691,
#Partially deleted in new
chr4	185630548	185656740	chr4:185630548-185656740	0	-	185630548	185630548	8553170	6	50,115,190,45,67,126,	0,16119,18918,21235,22113,26066,
#Partially deleted in new
chr4	185638894	185656967	chr4:185638894-185656967	0	-	185638894	185638894	8553170	6	141,115,190,45,67,353,	0,7773,10572,12889,13767,17720,
#Partially deleted in new
chr4	185645577	185657546	chr4:185645577-185657546	0	-	185645577	185645577	8553170	6	494,115,190,45,67,123,	0,1090,3889,6206,7084,11846,
#Partially deleted in new
chr4	185645837	185656743	chr4:185645837-185656743	0	-	185645837	185645837	8553170	6	234,115,190,45,67,129,	0,830,3629,5946,6824,10777,
#Partially deleted in new
chr4	185645982	185656724	chr4:185645982-185656724	0	-	185645982	185645982	8553170	5	89,115,190,67,110,	0,685,3484,6679,10632,
#Partially deleted in new
chr4	185646173	185656734	chr4:185646173-185656734	0	-	185646173	185646173	8553170	5	609,190,45,67,120,	0,3293,5610,6488,10441,
#Partially deleted in new
chr4	185646447	185656680	chr4:185646447-185656680	0	-	185646447	185646447	8553170	4	335,190,67,66,	0,3019,6214,10167,
#Partially deleted in new
chr4	185646616	185812238	chr4:185646616-185812238	0	-	185646616	185646616	8553170	12	166,190,45,67,173,139,125,27,93,50,140,575,	0,2850,5167,6045,10807,15487,31806,32179,38137,43945,128610,165047,
#Partially deleted in new
chr4	185646666	185657301	chr4:185646666-185657301	0	-	185646666	185646666	8553170	5	116,190,45,67,120,	0,2800,5117,5995,10515,
#Partially deleted in new
chr4	185652694	185761590	chr4:185652694-185761590	0	-	185652694	185662197	789624	6	34,173,139,56,27,117,	0,4729,9409,25728,26101,108779,
#Partially deleted in new
chr4	185652716	185811752	chr4:185652716-185811752	0	-	185652716	185662197	789624	6	12,173,139,125,27,89,	0,4707,9387,25706,26079,158947,
#Partially deleted in new
chr4	185657423	185775522	chr4:185657423-185775522	0	-	185657423	185662197	789624	5	173,139,125,27,296,	0,4680,20999,21372,117803,
#Partially deleted in new
chr4	185657471	185775276	chr4:185657471-185775276	0	-	185657471	185690571	789624	7	125,139,56,27,50,56,46,	0,4632,20951,21324,33090,76627,117759,
#Partially deleted in new
chr4	185657471	185775289	chr4:185657471-185775289	0	-	185657471	185662197	789624	6	125,139,56,27,157,63,	0,4632,20951,21324,76526,117755,
#Partially deleted in new
chr4	185657486	185775413	chr4:185657486-185775413	0	-	185657486	185662197	789624	6	110,139,56,27,56,187,	0,4617,20936,21309,76612,117740,
#Partially deleted in new
chr4	185657512	185775441	chr4:185657512-185775441	0	-	185657512	185662197	789624	6	84,139,56,27,52,215,	0,4591,20910,21283,117547,117714,
#Partially deleted in new
chr4	185657523	185775380	chr4:185657523-185775380	0	-	185657523	185662197	789624	6	73,139,125,27,56,154,	0,4580,20899,21272,76575,117703,
#Partially deleted in new
chr4	185657533	185775451	chr4:185657533-185775451	0	-	185657533	185690571	789624	6	63,139,125,27,50,225,	0,4570,20889,21262,33028,117693,
#Partially deleted in new
chr4	185657535	185810894	chr4:185657535-185810894	0	-	185657535	185690571	789624	6	61,139,125,27,50,147,	0,4568,20887,21260,33026,153212,
#Partially deleted in new
chr4	185657569	185811749	chr4:185657569-185811749	0	-	185657569	185690571	789624	7	27,139,125,27,50,140,86,	0,4534,20853,21226,32992,117657,154094,
#Partially deleted in new
chr4	185657579	185956334	chr4:185657579-185956334	0	-	185657579	185684814	789624	7	17,139,56,27,93,140,139,	0,4524,20843,21216,27174,117647,298616,
#Partially deleted in new
chr4	185662107	185775380	chr4:185662107-185775380	0	-	185662107	185684814	789624	6	135,125,27,93,56,154,	0,16315,16688,22646,71991,113119,
#Partially deleted in new
chr4	185662158	185811979	chr4:185662158-185811979	0	-	185662158	185690571	789624	7	84,125,27,93,50,140,316,	0,16264,16637,22595,28403,113068,149505,
#Partially deleted in new
chr4	185662169	185812209	chr4:185662169-185812209	0	-	185662169	185662197	789624	5	73,56,27,140,546,	0,16253,16626,113057,149494,
#Partially deleted in new
chr4	185662176	185811012	chr4:185662176-185811012	0	-	185662176	185690571	789624	7	66,125,27,93,50,136,75,	0,16246,16619,22577,28385,113054,148761,
#Partially deleted in new
chr4	185662203	185811104	chr4:185662203-185811104	0	-	185662203	185690571	789624	7	39,56,27,93,50,140,167,	0,16219,16592,22550,28358,113023,148734,
#Partially deleted in new
chr4	185662205	185812049	chr4:185662205-185812049	0	-	185662205	185662205	8553170	5	37,125,27,140,386,	0,16217,16590,113021,149458,
#Partially deleted in new
chr4	185662209	185775451	chr4:185662209-185775451	0	-	185662209	185690571	789624	6	33,125,27,93,50,225,	0,16213,16586,22544,28352,113017,
#Partially deleted in new
chr4	185662214	185956348	chr4:185662214-185956348	0	-	185662214	185684814	789624	6	28,125,27,93,136,153,	0,16208,16581,22539,113016,293981,
#Partially deleted in new
chr4	185662215	185956409	chr4:185662215-185956409	0	-	185662215	185684814	789624	6	27,125,27,93,140,214,	0,16207,16580,22538,113011,293980,
#Partially deleted in new
chr4	185662215	185775441	chr4:185662215-185775441	0	-	185662215	185684814	789624	5	27,125,27,93,215,	0,16207,16580,22538,113011,
#Partially deleted in new
chr4	185662234	185956334	chr4:185662234-185956334	0	-	185662234	185690571	789624	7	8,125,27,93,50,140,139,	0,16188,16561,22519,28327,112992,293961,
#Partially deleted in new
chr4	185665884	185675417	chr4:185665884-185675417	3	+	185665884	185665884	8553170	2	303,315,	0,9218,
#Partially deleted in new
chr4	185666038	185775414	chr4:185666038-185775414	0	-	185666038	185690571	789624	6	168,56,27,93,50,188,	0,12384,12757,18715,24523,109188,
#Partially deleted in new
chr4	185666113	185811757	chr4:185666113-185811757	0	-	185666113	185690571	789624	6	93,125,27,50,136,94,	0,12309,12682,24448,109117,145550,
#Partially deleted in new
chr4	185677347	185690599	chr4:185677347-185690599	0	-	185677347	185690571	789624	5	291,125,27,93,38,	0,1075,1448,7406,13214,
#Partially deleted in new
chr4	185677499	185775833	chr4:185677499-185775833	0	-	185677499	185677499	8553170	5	139,125,27,140,132,	0,923,1296,97727,98202,
#Partially deleted in new
chr4	185677557	185811104	chr4:185677557-185811104	0	-	185677557	185677557	8553170	5	81,125,27,140,167,	0,865,1238,97669,133380,
#Partially deleted in new
chr4	185677564	185811960	chr4:185677564-185811960	0	-	185677564	185677564	8553170	5	74,56,27,140,297,	0,858,1231,97662,134099,
#Partially deleted in new
chr4	185678422	185740330	chr4:185678422-185740330	0	-	185678422	185684814	789624	4	125,27,89,330,	0,373,6331,61578,
#Partially deleted in new
chr4	185678423	185811757	chr4:185678423-185811757	0	-	185678423	185684814	789624	6	124,27,93,56,140,94,	0,372,6330,55675,96803,133240,
#Partially deleted in new
chr4	185678429	185811852	chr4:185678429-185811852	0	-	185678429	185678429	8553170	5	118,27,93,140,189,	0,366,6324,96797,133234,
#Partially deleted in new
chr4	185684810	185813124	chr4:185684810-185813124	0	-	185684810	185690571	789624	6	36,50,56,140,84,177,	0,5751,49288,90416,126853,128137,
#Deleted in new
chr4	185756928	185757048	chr4:185756928-185757048	7	-	185756928	185756928	16724991	1	120,	0,
#Partially deleted in new
chr4	185757041	185956368	chr4:185757041-185956368	0	-	185757041	185757041	8553170	3	282,140,173,	0,18185,199154,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	185770978	185812239	chr4:185770978-185812239	0	-	185770978	185770978	8553170	2	4388,576,	0,40685,
#Partially deleted in new
chr4	185773944	185956348	chr4:185773944-185956348	0	-	185773944	185773944	8553170	2	1422,153,	0,182251,
#Partially deleted in new
chr4	185775280	185933370	chr4:185775280-185933370	0	-	185775280	185775280	8553170	3	86,77,435,	0,119016,157655,
#Deleted in new
chr4	185918139	185919460	chr4:185918139-185919460	3	+	185918139	185918139	8553170	2	397,152,	0,1169,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	186026455	186026586	chr4:186026455-186026586	3	-	186026455	186026455	8553170	1	131,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	186069151	186088069	chr4:186069151-186088069	3	+	186076619	186084873	0	5	97,448,192,1853,3425,	0,7461,9688,13168,15493,
#Partially deleted in new
chr4	186069154	186082933	chr4:186069154-186082933	0	+	186076619	186082933	789624	5	94,448,192,231,191,	0,7458,9685,13165,13588,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	186081610	186085024	chr4:186081610-186085024	0	+	186081610	186081610	8553170	2	2562,380,	0,3034,
#Partially deleted in new
chr4	186081616	186084889	chr4:186081616-186084889	1	+	186082517	186084873	0	3	212,1853,245,	0,703,3028,
#Partially deleted in new
chr4	186081618	186082717	chr4:186081618-186082717	0	+	186081618	186081618	8553170	2	230,398,	0,701,
#Partially deleted in new
chr4	186104418	186172140	chr4:186104418-186172140	3	+	186151959	186171987	789624	14	102,111,139,143,126,171,191,155,104,210,121,129,82,227,	0,44754,45147,47484,49226,50049,51581,53146,58426,59005,60925,62549,62762,67495,
#Partially deleted in new
chr4	186105076	186172662	chr4:186105076-186172662	1	+	186105076	186171987	789624	14	566,111,139,143,126,171,191,155,104,210,121,129,82,749,	0,44096,44489,46826,48568,49391,50923,52488,57768,58347,60267,61891,62104,66837,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	186105457	186149283	chr4:186105457-186149283	0	+	186105457	186105457	8553170	3	185,272,111,	0,2006,43715,
#Deleted in new
chr4	186130020	186130155	chr4:186130020-186130155	3	+	186130020	186130020	8553170	1	135,	0,
#Partially deleted in new
chr4	186144060	186167330	chr4:186144060-186167330	0	+	186144060	186144060	8553170	13	212,111,139,143,126,171,191,155,104,210,121,129,150,	0,5112,5505,7842,9584,10407,11939,13504,18784,19363,21283,22907,23120,
#Partially deleted in new
chr4	186144065	186154484	chr4:186144065-186154484	0	+	186151959	186154484	789624	6	207,111,112,143,126,17,	0,5107,5527,7837,9579,10402,
#Partially deleted in new
chr4	186144252	186153741	chr4:186144252-186153741	0	+	186151959	186153741	789624	5	80,111,139,143,97,	0,4920,5313,7650,9392,
#Partially deleted in new
chr4	186144286	186151934	chr4:186144286-186151934	0	+	186144286	186144286	8553170	4	304,111,139,32,	0,4886,5279,7616,
#Partially deleted in new
chr4	186144482	186158410	chr4:186144482-186158410	0	+	186144482	186144482	8553170	9	233,111,139,143,126,171,191,155,522,	0,4690,5083,7420,9162,9985,11517,13082,13406,
#Partially deleted in new
chr4	186144547	186153667	chr4:186144547-186153667	0	+	186151959	186153667	789624	5	168,111,112,143,23,	0,4625,5045,7355,9097,
#Partially deleted in new
chr4	186144548	186158375	chr4:186144548-186158375	0	+	186144548	186144548	8553170	7	167,111,126,171,191,155,487,	0,4624,9096,9919,11451,13016,13340,
#Partially deleted in new
chr4	186144840	186172667	chr4:186144840-186172667	1	+	186151959	186171987	789624	14	272,111,139,143,126,171,191,155,104,210,121,129,82,754,	0,4332,4725,7062,8804,9627,11159,12724,18004,18583,20503,22127,22340,27073,
#Partially deleted in new
chr4	186144862	186172110	chr4:186144862-186172110	1	+	186151959	186171987	789624	13	250,111,143,126,171,191,155,104,210,121,129,82,197,	0,4310,7040,8782,9605,11137,12702,17982,18561,20481,22105,22318,27051,
#Partially deleted in new
chr4	186144926	186172142	chr4:186144926-186172142	1	+	186151959	186171987	789624	14	186,111,112,143,126,171,191,155,104,210,121,129,82,229,	0,4246,4666,6976,8718,9541,11073,12638,17918,18497,20417,22041,22254,26987,
#Partially deleted in new
chr4	186149237	186172140	chr4:186149237-186172140	1	+	186151959	186167014	789624	14	46,112,143,126,171,191,155,104,205,3,121,129,82,227,	0,355,2665,4407,5230,6762,8327,13607,14186,14393,16106,17730,17943,22676,
#Deleted in new
chr4	186157895	186158843	chr4:186157895-186158843	7	+	186157895	186157895	16724991	2	670,194,	0,754,
#Partially deleted in new
chr4	186163557	186167655	chr4:186163557-186167655	0	+	186163557	186167403	789624	5	76,121,129,82,287,	0,1786,3410,3623,3811,
#Partially deleted in new
chr4	186163558	186172142	chr4:186163558-186172142	0	+	186163558	186171987	789624	5	75,121,129,79,229,	0,1785,3409,3625,8355,
#Partially deleted in new
chr4	186165407	186167511	chr4:186165407-186167511	0	+	186165407	186165407	8553170	3	57,129,328,	0,1560,1776,
#Partially deleted in new
chr4	186167205	186172660	chr4:186167205-186172660	0	+	186167205	186172046	789624	2	57,718,	0,4737,
#Deleted in new
chr4	186170862	186171257	chr4:186170862-186171257	7	-	186170862	186170862	16724991	1	395,	0,
#Deleted in new
chr4	186189031	186191490	chr4:186189031-186191490	3	-	186189031	186189031	789624	1	2459,	0,
#Partially deleted in new
chr4	186191519	186210801	chr4:186191519-186210801	3	+	186191823	186210641	789624	11	518,113,86,191,70,127,186,103,135,180,333,	0,2980,4483,5420,6013,7437,9637,13680,17345,17573,18949,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	186196087	186213011	chr4:186196087-186213011	0	+	186196087	186196087	8553170	6	1515,127,4146,135,180,2543,	0,2869,5069,12777,13005,14381,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	186204380	186211035	chr4:186204380-186211035	0	+	186204380	186204380	8553170	5	77,103,135,180,567,	0,819,4484,4712,6088,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr4	186204836	186213456	chr4:186204836-186213456	0	+	186204836	186204836	8553170	5	222,103,135,180,2988,	0,363,4028,4256,5632,
#Partially deleted in new
chr4	186208978	186258469	chr4:186208978-186258469	0	+	186208978	186258212	789624	15	21,180,163,107,160,110,160,110,163,113,169,176,96,140,449,	0,114,23148,24973,27802,29277,41264,42240,42508,42770,43038,45609,47013,48247,49042,
#Partially deleted in new
chr4	186226437	186236896	chr4:186226437-186236896	0	+	186228195	186236896	789624	6	52,148,59,163,107,116,	0,1002,1757,5689,7514,10343,
#Partially deleted in new
chr4	186227401	186258471	chr4:186227401-186258471	3	+	186228195	186258212	789624	15	186,59,163,107,160,110,160,110,163,113,169,176,96,140,451,	0,793,4725,6550,9379,10854,22841,23817,24085,24347,24615,27186,28590,29824,30619,
#Partially deleted in new
chr4	186227506	186238304	chr4:186227506-186238304	0	+	186232182	186238304	789624	6	81,9,163,107,160,49,	0,738,4620,6445,9274,10749,
#Partially deleted in new
chr4	186227517	186258470	chr4:186227517-186258470	1	+	186232182	186258094	789624	15	70,9,119,163,107,160,110,160,110,163,113,169,176,96,450,	0,727,1353,4609,6434,9263,10738,22725,23701,23969,24231,24499,27070,28474,30503,
#Partially deleted in new
chr4	186227558	186258292	chr4:186227558-186258292	0	+	186227558	186227558	8553170	15	29,59,163,107,160,110,191,110,163,113,169,176,96,140,272,	0,636,4568,6393,9222,10697,22684,23660,23928,24190,24458,27029,28433,29667,30462,
#Deleted in new
chr4	186251031	186252163	chr4:186251031-186252163	0	+	186251031	186251031	8553170	4	297,163,113,147,	0,455,717,985,
#Partially deleted in new
chr4	186265944	186288780	chr4:186265944-186288780	3	+	186267136	186288614	0	15	351,56,163,107,160,110,160,110,163,107,169,176,96,140,328,	0,1191,5664,7126,8171,9842,10286,14067,14278,14529,18147,19693,20470,21739,22508,
#Partially deleted in new
chr4	186266199	186274897	chr4:186266199-186274897	1	+	186267136	186274279	789624	5	96,56,163,107,782,	0,936,5409,6871,7916,
#Partially deleted in new
chr4	186266262	186288780	chr4:186266262-186288780	1	+	186267136	186288614	0	14	33,56,163,105,110,160,110,163,107,169,176,96,140,328,	0,873,5346,6808,9524,9968,13749,13960,14211,17829,19375,20152,21421,22190,
#Partially deleted in new
chr4	186272980	186274609	chr4:186272980-186274609	0	+	186272980	186272980	8553170	2	197,494,	0,1135,
#Partially deleted in new
chr4	186275854	186282069	chr4:186275854-186282069	0	+	186275854	186281984	789624	6	42,160,110,163,107,135,	0,376,4157,4368,4619,6080,
#Partially deleted in new
chr4	186285637	186288806	chr4:186285637-186288806	0	+	186285637	186288614	789624	3	176,140,354,	0,2046,2815,
#Partially deleted in new
chr4	186286093	186500997	chr4:186286093-186500997	3	-	186286093	186286093	789624	4	173,575,277,153,	0,2334,4662,214751,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	186287588	186288780	chr4:186287588-186288780	0	+	186287588	186287588	8553170	2	235,328,	0,864,
#Partially deleted in new
chr4	186328715	186329601	chr4:186328715-186329601	7	-	186328715	186328715	16724991	1	886,	0,
#Partially deleted in new
chr4	186423727	186500997	chr4:186423727-186500997	1	-	186423727	186423727	789624	6	105,147,862,151,94,153,	0,362,2509,7890,8417,77117,
#Partially deleted in new
chr4	186423727	186426293	chr4:186423727-186426293	0	-	186423727	186423727	8553170	2	105,57,	0,2509,
#Partially deleted in new
chr4	186426545	186555328	chr4:186426545-186555328	3	-	186426949	186555328	789624	2	553,147,	0,128636,
#Partially deleted in new
chr4	186426973	186500997	chr4:186426973-186500997	0	-	186426973	186426973	8553170	5	125,146,151,94,153,	0,1731,4644,5171,73871,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	186501108	186501215	chr4:186501108-186501215	3	+	186501108	186501108	8553170	1	107,	0,
#Partially deleted in new
chr4	186533654	186555567	chr4:186533654-186555567	3	-	186533688	186555365	789624	2	903,386,	0,21527,
#Partially deleted in new
chr4	186587782	186723855	chr4:186587782-186723855	3	-	186588591	186709827	789624	27	1438,138,632,111,154,463,158,132,802,198,144,138,215,390,234,154,197,4068,211,276,140,211,330,62,315,3283,192,	0,7906,8757,9899,10189,12115,13486,15120,15393,16594,18287,21400,22018,23603,25326,26408,29222,29925,40371,40705,45901,48242,48802,51939,75516,118780,135881,
#Partially deleted in new
chr4	186587794	186723833	chr4:186587794-186723833	1	-	186588591	186709827	789624	29	1426,138,632,111,154,463,158,132,802,198,144,138,215,390,234,154,197,4068,220,12,9,252,140,211,330,62,315,3283,170,	0,7894,8745,9887,10177,12103,13474,15108,15381,16582,18275,21388,22006,23591,25314,26396,29210,29913,40350,40693,40706,40717,45889,48230,48790,51927,75504,118768,135869,
#Partially deleted in new
chr4	186587826	186597231	chr4:186587826-186597231	0	-	186587826	186587826	8553170	3	1394,138,692,	0,7862,8713,
#Partially deleted in new
chr4	186588391	186596841	chr4:186588391-186596841	0	-	186588591	186596841	789624	4	829,36,138,302,	0,1976,7297,8148,
#Partially deleted in new
chr4	186588806	186598024	chr4:186588806-186598024	0	-	186588806	186598024	789624	5	414,138,138,111,53,	0,6882,8227,8875,9165,
#Partially deleted in new
chr4	186588989	186595745	chr4:186588989-186595745	0	-	186590545	186595697	789624	3	231,191,57,	0,1515,6699,
#Partially deleted in new
chr4	186589071	186595800	chr4:186589071-186595800	0	-	186589071	186595800	789624	4	149,36,60,112,	0,1296,3621,6617,
#Partially deleted in new
chr4	186597110	186598127	chr4:186597110-186598127	0	-	186597110	186597110	8553170	3	161,111,156,	0,571,861,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	186597729	186598821	chr4:186597729-186598821	0	-	186597729	186597729	8553170	3	63,154,295,	0,242,797,
#Partially deleted in new
chr4	186600330	186601700	chr4:186600330-186601700	0	-	186600330	186600330	8553170	2	30,432,	0,938,
#Partially deleted in new
chr4	186609249	186610070	chr4:186609249-186610070	0	-	186609249	186609249	8553170	2	71,270,	0,551,
#Partially deleted in new
chr4	186708362	186726722	chr4:186708362-186726722	0	-	186708362	186709827	789624	2	1483,369,	0,17991,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	186890968	186892366	chr4:186890968-186892366	3	+	186890968	186890968	8553170	2	400,96,	0,1302,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	186892551	186892983	chr4:186892551-186892983	3	+	186892551	186892551	8553170	1	432,	0,
#Deleted in new
chr4	186900539	186900838	chr4:186900539-186900838	7	+	186900539	186900539	16724991	1	299,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	186979489	187021973	chr4:186979489-187021973	3	-	186979489	186979489	8553170	3	243,183,48,	0,16766,42436,
#Deleted in new
chr4	187060098	187060930	chr4:187060098-187060930	3	+	187060098	187060098	8553170	2	165,256,	0,576,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	187201985	187209346	chr4:187201985-187209346	3	+	187201985	187201985	8553170	3	157,261,160,	0,6801,7201,
#Partially deleted in new
chr4	187202032	187203614	chr4:187202032-187203614	1	+	187202032	187202032	8553170	2	110,633,	0,949,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	187304082	187309682	chr4:187304082-187309682	3	-	187304082	187304082	789624	4	385,1064,164,501,	0,555,3023,5099,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	187370647	187371921	chr4:187370647-187371921	3	+	187370647	187370647	789624	3	128,132,238,	0,647,1036,
#Deleted in new
chr4	187413563	187415697	chr4:187413563-187415697	3	+	187413563	187413563	8553170	2	148,388,	0,1746,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	187441676	187444298	chr4:187441676-187444298	7	-	187441676	187441676	16724991	3	616,119,488,	0,1186,2134,
#Deleted in new
chr4	187516152	187517208	chr4:187516152-187517208	3	-	187516152	187516152	8553170	2	572,127,	0,929,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	187532877	187555949	chr4:187532877-187555949	1	-	187532877	187532877	8553170	3	326,84,174,	0,22183,22898,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	187532881	187555904	chr4:187532881-187555904	0	-	187532881	187532881	8553170	2	322,129,	0,22894,
#Partially deleted in new
chr4	187555910	187592927	chr4:187555910-187592927	3	-	187555910	187555910	8553170	5	48,174,188,110,44,	0,1836,2166,26510,36973,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	187613764	187660369	chr4:187613764-187660369	3	+	187613764	187613764	8553170	3	235,99,233,	0,8877,46372,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	187650466	187660367	chr4:187650466-187660367	0	+	187650466	187650466	8553170	2	195,231,	0,9670,
#Deleted in new
chr4	187746093	187748199	chr4:187746093-187748199	7	-	187746093	187746093	16724991	1	2106,	0,
#Partially deleted in new
chr4	187970272	187971284	chr4:187970272-187971284	7	+	187970272	187970272	16724991	2	216,458,	0,554,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	187995770	188005050	chr4:187995770-188005050	3	+	188002807	188003740	789624	4	70,166,77,2338,	0,3337,3838,6942,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	187995770	188005045	chr4:187995770-188005045	1	+	188002807	188003740	789624	3	70,77,2333,	0,3838,6942,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	188002707	188005045	chr4:188002707-188005045	1	+	188002807	188003740	789624	1	2338,	0,
#Partially deleted in new
chr4	188091272	188105593	chr4:188091272-188105593	3	-	188091372	188105368	789624	7	669,101,23,141,195,96,414,	0,5788,6051,7762,9783,13564,13907,
#Partially deleted in new
chr4	188091372	188101250	chr4:188091372-188101250	0	-	188097140	188101250	789624	5	569,236,101,141,195,	0,1414,5688,7662,9683,
#Partially deleted in new
chr4	188091372	188101250	chr4:188091372-188101250	0	-	188097140	188101250	789624	4	569,101,141,195,	0,5688,7662,9683,
#Partially deleted in new
chr4	188098628	188105593	chr4:188098628-188105593	0	-	188098628	188098628	8553170	4	547,195,96,414,	0,2427,6208,6551,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	188105379	188106039	chr4:188105379-188106039	0	-	188105379	188105379	8553170	2	208,333,	0,327,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	188105412	188109603	chr4:188105412-188109603	0	-	188105412	188105412	8553170	2	175,361,	0,3830,
#Partially deleted in new
chr4	188106557	188106914	chr4:188106557-188106914	7	+	188106557	188106557	16724991	1	357,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	188121530	188121634	chr4:188121530-188121634	3	-	188121530	188121530	8553170	1	104,	0,
#Partially deleted in new
chr4	188139418	188147622	chr4:188139418-188147622	3	+	188139558	188147372	789624	6	548,96,231,23,98,801,	0,1109,2833,4419,4617,7403,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	188140821	188143379	chr4:188140821-188143379	3	-	188140821	188140821	8553170	2	53,452,	0,2106,
#Partially deleted in new
chr4	188143642	188147743	chr4:188143642-188147743	0	+	188143642	188143642	8553170	3	218,98,922,	0,393,3179,
#Partially deleted in new
chr4	188143662	188147306	chr4:188143662-188147306	0	+	188143662	188143662	8553170	4	85,23,98,485,	0,175,373,3159,
#Deleted in new
chr4	188160064	188161139	chr4:188160064-188161139	3	+	188160064	188160064	8553170	2	38,639,	0,436,
#Deleted in new
chr4	188349375	188350024	chr4:188349375-188350024	7	-	188349375	188349375	16724991	1	649,	0,
#Partially deleted in new
chr4	188387470	188389666	chr4:188387470-188389666	7	-	188387470	188387470	16724991	2	1054,795,	0,1401,
#Partially deleted in new
chr4	188400735	188485865	chr4:188400735-188485865	1	+	188400735	188400735	8553170	5	98,197,59,275,87,	0,35968,75962,76902,85043,
#Partially deleted in new
chr4	188400735	188485865	chr4:188400735-188485865	0	+	188400735	188400735	8553170	3	98,197,87,	0,35968,85043,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr4	188455577	188538552	chr4:188455577-188538552	1	+	188455577	188455577	8553170	6	97,99,59,275,87,1818,	0,1086,21120,22060,30201,81157,
#Partially deleted in new
chr4	188455592	188601908	chr4:188455592-188601908	2	+	188455592	188455592	789624	5	82,99,59,87,141,	0,1071,21105,30186,146175,
#Partially deleted in new
chr4	188455624	188601906	chr4:188455624-188601906	0	+	188455624	188455624	8553170	4	50,99,87,139,	0,1039,30154,146143,
#Partially deleted in new
chr4	188485778	188681051	chr4:188485778-188681051	0	+	188485778	188485778	8553170	2	87,331,	0,194942,
#Deleted in new
chr4	188630923	188631747	chr4:188630923-188631747	7	+	188630923	188630923	16724991	2	257,79,	0,745,
#Deleted in new
chr4	188713643	188715442	chr4:188713643-188715442	7	+	188713643	188713643	16724991	1	1799,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	188716664	188716725	chr4:188716664-188716725	3	-	188716664	188716664	8553170	1	61,	0,
#Deleted in new
chr4	188738372	188739494	chr4:188738372-188739494	7	+	188738372	188738372	16724991	1	1122,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	188740506	188741281	chr4:188740506-188741281	3	-	188740506	188740506	8553170	1	775,	0,
#Partially deleted in new
chr4	188757678	188778979	chr4:188757678-188778979	3	+	188757678	188757678	8553170	3	66,75,296,	0,11112,21005,
#Partially deleted in new
chr4	188776656	188785511	chr4:188776656-188785511	3	+	188776656	188776656	8553170	3	111,99,216,	0,7256,8639,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	188777678	188796633	chr4:188777678-188796633	3	-	188777678	188777678	8553170	3	373,220,1398,	0,13393,17557,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	188990714	189002075	chr4:188990714-189002075	3	-	188990714	188990714	8553170	2	340,306,	0,11055,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	189193099	189204877	chr4:189193099-189204877	3	+	189193099	189193099	8553170	2	177,235,	0,11543,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr4	189288676	189291336	chr4:189288676-189291336	3	-	189288676	189288676	8553170	2	181,158,	0,2502,
#Partially deleted in new
chr4	189472964	189475192	chr4:189472964-189475192	7	+	189472964	189472964	16724991	1	2228,	0,
#Partially deleted in new
chr4	189473146	189475190	chr4:189473146-189475190	4	+	189473146	189473146	16724991	4	331,277,259,388,	0,751,1316,1656,
#Partially deleted in new
chr4	189659604	189661486	chr4:189659604-189661486	3	+	189659604	189659604	789624	3	125,209,545,	0,321,1337,
#Partially deleted in new
chr4	189703880	189704490	chr4:189703880-189704490	3	-	189703880	189703880	8553170	1	610,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	189709538	189709714	chr4:189709538-189709714	3	-	189709538	189709538	8553170	1	176,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	189780335	189940271	chr4:189780335-189940271	1	-	189780335	189780335	8553170	3	464,137,102,	0,156861,159834,
#Partially deleted in new
chr4	189821111	189917322	chr4:189821111-189917322	1	-	189821111	189821111	8553170	3	554,194,231,	0,43481,95980,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	189821480	189939741	chr4:189821480-189939741	1	-	189821480	189821480	8553170	4	185,112,137,83,	0,74051,115716,118178,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr4	189864261	189939837	chr4:189864261-189939837	3	-	189864261	189864261	8553170	3	525,137,179,	0,72935,75397,
#Deleted in new
chr4	189881514	189884868	chr4:189881514-189884868	3	+	189881514	189881514	789624	2	383,209,	0,3145,
#Partially deleted in new
chr4	189940787	189963204	chr4:189940787-189963204	3	+	189941009	189963129	789624	9	284,71,126,58,115,105,92,111,112,	0,2414,11374,12280,14249,16610,19960,21034,22305,
#Partially deleted in new
chr4	189940869	189961884	chr4:189940869-189961884	0	+	189952239	189961884	789624	7	202,96,71,126,105,92,63,	0,1039,2332,11292,16528,19878,20952,
#Partially deleted in new
chr4	189940898	189955150	chr4:189940898-189955150	0	+	189941009	189941899	789624	6	173,172,71,126,58,114,	0,934,2303,11263,12169,14138,
#Partially deleted in new
chr4	189940900	189957502	chr4:189940900-189957502	0	+	189952217	189957502	789624	7	171,92,71,126,58,115,105,	0,1008,2301,11261,12167,14136,16497,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr4	189941023	189961176	chr4:189941023-189961176	0	+	189941023	189941023	8553170	7	48,71,126,58,115,105,315,	0,2178,11138,12044,14013,16374,19838,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	189960747	189963188	chr4:189960747-189963188	0	+	189960747	189961862	789624	4	92,122,111,96,	0,681,1074,2345,
#Partially deleted in new
chr4	189961081	189963202	chr4:189961081-189963202	0	+	189961081	189961081	8553170	3	119,111,110,	0,740,2011,
#Deleted in new
chr4	189973598	189973847	chr4:189973598-189973847	7	-	189973598	189973598	16724991	1	249,	0,
#Deleted in new
chr4	189979901	189982379	chr4:189979901-189982379	7	+	189979901	189979901	16724991	6	180,263,124,93,117,112,	0,231,583,1332,1797,2366,
#Deleted in new
chr4	189982522	189984871	chr4:189982522-189984871	7	-	189982522	189982522	16724991	4	1028,111,109,57,	0,1732,1921,2292,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	190015137	190015255	chr4:190015137-190015255	7	+	190015137	190015137	16724991	1	118,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr4	190017695	190017814	chr4:190017695-190017814	7	+	190017695	190017695	16724991	1	119,	0,
#Deleted in new
chr4	190021406	190022665	chr4:190021406-190022665	7	-	190021406	190021406	16724991	1	1259,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	190024350	190027254	chr4:190024350-190027254	1	-	190025560	190027204	789624	4	1716,78,78,228,	0,2033,2340,2676,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr4	190024366	190027257	chr4:190024366-190027257	3	-	190025560	190027204	789624	4	1700,78,75,231,	0,2017,2324,2660,
#Deleted in new
chr4	190037915	190038399	chr4:190037915-190038399	7	-	190037915	190037915	16724991	1	484,	0,
#Deleted in new
chr4	190041341	190043414	chr4:190041341-190043414	7	+	190041341	190041341	16724991	1	2073,	0,
#Deleted in new
chr4	190057901	190063005	chr4:190057901-190063005	7	-	190057901	190057901	16724991	12	22,122,77,136,95,93,142,55,154,111,143,193,	0,100,300,1263,1525,2262,2570,3028,3187,3438,3738,4911,
#Deleted in new
chr4	190064501	190067864	chr4:190064501-190067864	3	+	190064501	190064501	789624	1	3363,	0,
#Deleted in new
chr4	190065232	190065914	chr4:190065232-190065914	7	+	190065232	190065232	16724991	1	682,	0,
#Deleted in new
chr4	190067934	190069209	chr4:190067934-190069209	7	+	190067934	190067934	16724991	1	1275,	0,
#Deleted in new
chr4	190071231	190072506	chr4:190071231-190072506	7	+	190071231	190071231	16724991	1	1275,	0,
#Deleted in new
chr4	190074524	190075799	chr4:190074524-190075799	7	+	190074524	190074524	16724991	1	1275,	0,
#Deleted in new
chr4	190077817	190079092	chr4:190077817-190079092	7	+	190077817	190077817	16724991	1	1275,	0,
#Deleted in new
chr4	190081117	190082386	chr4:190081117-190082386	7	+	190081117	190081117	16724991	1	1269,	0,
#Deleted in new
chr4	190084411	190085686	chr4:190084411-190085686	7	+	190084411	190084411	16724991	1	1275,	0,
#Deleted in new
chr4	190087704	190088979	chr4:190087704-190088979	7	+	190087704	190087704	16724991	1	1275,	0,
#Deleted in new
chr4	190091004	190092279	chr4:190091004-190092279	7	+	190091004	190091004	16724991	1	1275,	0,
#Deleted in new
chr4	190173773	190175845	chr4:190173773-190175845	1	+	190173773	190175048	0	2	1511,199,	0,1873,
#Deleted in new
chr4	190173773	190175845	chr4:190173773-190175845	3	+	190173773	190175048	0	3	1283,92,199,	0,1419,1873,
#Deleted in new
chr4	190173773	190175845	chr4:190173773-190175845	1	+	190173773	190175198	789624	3	477,92,199,	0,1419,1873,
#Deleted in new
chr4	190173773	190175048	chr4:190173773-190175048	1	+	190173773	190175048	0	1	1275,	0,
#Partially deleted in new
chr4	190175192	190185942	chr4:190175192-190185942	0	+	190175192	190175192	8553170	3	92,99,94,	0,10148,10656,
#Partially deleted in new
chr4	190182116	190185911	chr4:190182116-190185911	0	+	190182116	190182116	8553170	4	65,68,99,63,	0,1119,3224,3732,
#Deleted in new
chr4	190195726	190196190	chr4:190195726-190196190	7	+	190195726	190195726	16724991	1	464,	0,
#Deleted in new
chr4	190195737	190195978	chr4:190195737-190195978	7	-	190195737	190195737	16724991	1	241,	0,
#Deleted in new
chr4_GL000257v2_alt	4028	43731	chr4_GL000257v2_alt:4028-43731	3	-	7740	43395	0	17	3937,135,63,40,37,83,167,85,118,109,95,54,90,424,329,102,364,	0,5927,8132,8303,8439,9736,12362,13752,19615,19815,21716,22407,22921,26640,27185,27896,39339,
#Deleted in new
chr4_GL000257v2_alt	6962	43731	chr4_GL000257v2_alt:6962-43731	1	-	7740	43395	0	16	1003,135,63,40,37,83,167,85,118,109,95,90,424,329,102,364,	0,2993,5198,5369,5505,6802,9428,10818,16681,16881,18782,19987,23706,24251,24962,36405,
#Deleted in new
chr4_GL000257v2_alt	6965	43395	chr4_GL000257v2_alt:6965-43395	1	-	7740	43395	789624	17	1000,135,63,64,37,83,167,85,118,109,95,54,90,424,329,102,28,	0,2990,5195,5366,5502,6799,9425,10815,16678,16878,18779,19470,19984,23703,24248,24959,36402,
#Deleted in new
chr4_GL000257v2_alt	9496	12363	chr4_GL000257v2_alt:9496-12363	0	-	9904	12363	789624	3	594,63,32,	0,2664,2835,
#Deleted in new
chr4_GL000257v2_alt	16133	23715	chr4_GL000257v2_alt:16133-23715	0	-	16133	16133	8553170	3	424,85,72,	0,1647,7510,
#Deleted in new
chr4_GL000257v2_alt	31407	32054	chr4_GL000257v2_alt:31407-32054	0	-	31407	31519	789624	2	135,130,	0,517,
#Deleted in new
chr4_GL000257v2_alt	31481	43687	chr4_GL000257v2_alt:31481-43687	0	-	31481	31519	789624	4	61,102,32,320,	0,443,6209,11886,
#Deleted in new
chr4_GL000257v2_alt	69968	70151	chr4_GL000257v2_alt:69968-70151	7	+	69968	69968	16724991	1	183,	0,
#Deleted in new
chr4_GL000257v2_alt	141139	191291	chr4_GL000257v2_alt:141139-191291	3	+	141203	190491	789624	10	75,125,122,68,164,39,178,260,143,962,	0,14371,19182,21430,24011,27267,28805,29913,31401,49190,
#Deleted in new
chr4_GL000257v2_alt	155510	171314	chr4_GL000257v2_alt:155510-171314	0	+	155510	169966	789624	6	125,122,68,39,178,262,	0,4811,7059,12896,14434,15542,
#Deleted in new
chr4_GL000257v2_alt	203126	205295	chr4_GL000257v2_alt:203126-205295	7	-	203126	203126	16724991	2	234,739,	0,1430,
#Deleted in new
chr4_GL000257v2_alt	222963	246983	chr4_GL000257v2_alt:222963-246983	3	-	223472	246379	789624	6	789,220,88,132,149,734,	0,7429,8487,16399,21431,23286,
#Deleted in new
chr4_GL000257v2_alt	280946	288841	chr4_GL000257v2_alt:280946-288841	7	-	280946	280946	16724991	4	275,208,81,186,	0,4046,5438,7709,
#Deleted in new
chr4_GL000257v2_alt	360643	363500	chr4_GL000257v2_alt:360643-363500	7	+	360643	360643	16724991	4	132,89,218,275,	0,1432,1913,2582,
#Deleted in new
chr4_GL000257v2_alt	390013	390746	chr4_GL000257v2_alt:390013-390746	7	+	390013	390013	16724991	1	733,	0,
#Deleted in new
chr4_GL000257v2_alt	392011	407215	chr4_GL000257v2_alt:392011-407215	3	+	392038	406898	789624	6	745,149,132,88,220,597,	0,2036,6278,10417,11336,14607,
#Deleted in new
chr4_GL000257v2_alt	392013	406962	chr4_GL000257v2_alt:392013-406962	1	+	392038	406898	789624	6	491,149,132,88,220,344,	0,2034,6276,10415,11334,14605,
#Deleted in new
chr4_GL000257v2_alt	410231	410387	chr4_GL000257v2_alt:410231-410387	7	-	410231	410231	16724991	1	156,	0,
#Deleted in new
chr4_GL000257v2_alt	437350	437629	chr4_GL000257v2_alt:437350-437629	7	-	437350	437350	16724991	1	279,	0,
#Deleted in new
chr4_GL000257v2_alt	453644	456150	chr4_GL000257v2_alt:453644-456150	7	-	453644	453644	16724991	2	265,226,	0,2280,
#Deleted in new
chr4_GL000257v2_alt	459903	460459	chr4_GL000257v2_alt:459903-460459	7	-	459903	459903	16724991	1	556,	0,
#Deleted in new
chr4_GL000257v2_alt	476669	476929	chr4_GL000257v2_alt:476669-476929	7	-	476669	476669	16724991	1	260,	0,
#Deleted in new
chr4_GL000257v2_alt	477026	483002	chr4_GL000257v2_alt:477026-483002	3	-	477026	477026	8553170	2	368,109,	0,5867,
#Deleted in new
chr4_GL000257v2_alt	483936	484053	chr4_GL000257v2_alt:483936-484053	7	-	483936	483936	16724991	1	117,	0,
#Deleted in new
chr4_GL000257v2_alt	490946	500760	chr4_GL000257v2_alt:490946-500760	7	-	490946	490946	16724991	4	274,219,88,130,	0,5233,6297,9684,
#Deleted in new
chr4_GL000257v2_alt	504481	527810	chr4_GL000257v2_alt:504481-527810	3	-	505831	527779	789624	6	1630,220,88,132,149,746,	0,2083,2692,4165,16843,22583,
#Deleted in new
chr4_GL000257v2_alt	505468	527380	chr4_GL000257v2_alt:505468-527380	0	-	519340	527380	789624	7	643,220,88,132,97,149,316,	0,1096,1705,3178,13832,15856,21596,
#Deleted in new
chr4_GL000257v2_alt	549017	552012	chr4_GL000257v2_alt:549017-552012	7	-	549017	549017	16724991	4	277,205,81,132,	0,794,1401,2863,
#Deleted in new
chr4_GL000257v2_alt	561027	564552	chr4_GL000257v2_alt:561027-564552	7	-	561027	561027	16724991	3	237,223,85,	0,2333,3440,
#Deleted in new
chr4_GL000257v2_alt	572953	573728	chr4_GL000257v2_alt:572953-573728	7	-	572953	572953	16724991	1	775,	0,
#Deleted in new
chr4_GL000257v2_alt	580874	586022	chr4_GL000257v2_alt:580874-586022	7	-	580874	580874	16724991	3	280,220,88,	0,4001,5060,
#Deleted in new
chr4_GL383527v1_alt	1311	30896	chr4_GL383527v1_alt:1311-30896	3	-	1311	30849	789624	8	169,57,148,150,126,238,307,87,	0,2124,5518,6992,15502,17388,26759,29498,
#Deleted in new
chr4_GL383527v1_alt	19360	69779	chr4_GL383527v1_alt:19360-69779	0	+	19360	19360	8553170	6	127,29,51,168,106,90,	0,564,4110,29194,49280,50329,
#Deleted in new
chr4_GL383527v1_alt	19379	29725	chr4_GL383527v1_alt:19379-29725	0	+	19379	19379	8553170	4	108,29,51,591,	0,545,4091,9755,
#Deleted in new
chr4_GL383527v1_alt	19384	74733	chr4_GL383527v1_alt:19384-74733	0	+	73527	74733	789624	8	103,29,51,106,91,71,128,86,	0,540,4086,49256,50305,52960,54125,55263,
#Deleted in new
chr4_GL383527v1_alt	19393	74685	chr4_GL383527v1_alt:19393-74685	0	+	73527	74685	789624	7	94,29,106,91,71,128,38,	0,531,49247,50296,52951,54116,55254,
#Deleted in new
chr4_GL383527v1_alt	68315	70417	chr4_GL383527v1_alt:68315-70417	0	+	68315	68315	8553170	3	101,106,728,	0,325,1374,
#Deleted in new
chr4_GL383527v1_alt	68317	85029	chr4_GL383527v1_alt:68317-85029	3	+	68381	84613	0	12	99,106,91,71,128,187,108,112,58,80,91,570,	0,323,1372,4027,5192,6330,7802,10628,12160,13700,14454,16142,
#Deleted in new
chr4_GL383527v1_alt	70442	85021	chr4_GL383527v1_alt:70442-85021	0	+	70442	70442	8553170	9	1973,128,27,108,112,58,80,91,562,	0,3067,4365,5677,8503,10035,11575,12329,14017,
#Deleted in new
chr4_GL383527v1_alt	78963	83482	chr4_GL383527v1_alt:78963-83482	0	+	78963	78963	8553170	5	94,58,80,91,56,	0,1514,3054,3808,4463,
#Deleted in new
chr4_GL383527v1_alt	88740	118534	chr4_GL383527v1_alt:88740-118534	3	-	90658	118464	789624	8	1953,93,164,122,168,140,109,205,	0,4218,5424,13244,15253,18199,19038,29589,
#Deleted in new
chr4_GL383528v1_alt	139651	150786	chr4_GL383528v1_alt:139651-150786	3	+	139651	139651	8553170	4	80,53,53,60,	0,6952,8952,11075,
#Deleted in new
chr4_GL383528v1_alt	139651	151442	chr4_GL383528v1_alt:139651-151442	0	+	139651	139651	8553170	2	80,199,	0,11592,
#Deleted in new
chr4_GL383528v1_alt	150811	151478	chr4_GL383528v1_alt:150811-151478	1	+	150811	150811	8553170	2	64,235,	0,432,
#Deleted in new
chr4_KI270785v1_alt	51256	93824	chr4_KI270785v1_alt:51256-93824	3	-	51256	51256	8553170	3	243,183,48,	0,16850,42520,
#Deleted in new
chr4_KI270786v1_alt	37433	38043	chr4_KI270786v1_alt:37433-38043	3	-	37433	37433	8553170	1	610,	0,
#Deleted in new
chr4_KI270786v1_alt	43091	43267	chr4_KI270786v1_alt:43091-43267	3	-	43091	43091	8553170	1	176,	0,
#Deleted in new
chr4_KI270786v1_alt	113888	114352	chr4_KI270786v1_alt:113888-114352	1	-	113888	113888	8553170	1	464,	0,
#Deleted in new
chr4_KI270786v1_alt	154664	201812	chr4_KI270786v1_alt:154664-201812	1	-	154664	154664	8553170	2	554,194,	0,46954,
#Deleted in new
chr4_KI270786v1_alt	155033	232669	chr4_KI270786v1_alt:155033-232669	3	-	155033	155033	8553170	2	185,112,	0,77524,
#Deleted in new
chr4_KI270786v1_alt	201287	201812	chr4_KI270786v1_alt:201287-201812	1	-	201287	201287	8553170	1	525,	0,
#Deleted in new
chr4_KI270786v1_alt	218540	221894	chr4_KI270786v1_alt:218540-221894	3	+	218540	218540	789624	2	383,209,	0,3145,
#Deleted in new
chr4_KI270788v1_alt	1291	1694	chr4_KI270788v1_alt:1291-1694	3	+	1291	1291	8553170	1	403,	0,
#Deleted in new
chr4_KI270789v1_alt	7953	8602	chr4_KI270789v1_alt:7953-8602	7	-	7953	7953	16724991	1	649,	0,
#Deleted in new
chr4_KI270789v1_alt	46048	48244	chr4_KI270789v1_alt:46048-48244	7	-	46048	46048	16724991	2	1054,795,	0,1401,
#Deleted in new
chr4_KI270789v1_alt	59313	144439	chr4_KI270789v1_alt:59313-144439	0	+	59313	59313	8553170	5	98,197,59,275,87,	0,35968,75962,76898,85039,
#Deleted in new
chr4_KI270789v1_alt	59313	144439	chr4_KI270789v1_alt:59313-144439	0	+	59313	59313	8553170	3	98,197,87,	0,35968,85039,
#Deleted in new
chr4_KI270789v1_alt	114155	202137	chr4_KI270789v1_alt:114155-202137	3	+	114155	114155	8553170	6	97,99,59,275,87,1818,	0,1086,21120,22056,30197,86164,
#Deleted in new
chr4_KI270789v1_alt	114170	144439	chr4_KI270789v1_alt:114170-144439	0	+	114170	114170	789624	4	82,99,59,87,	0,1071,21105,30182,
#Deleted in new
chr4_KI270789v1_alt	114202	144439	chr4_KI270789v1_alt:114202-144439	0	+	114202	114202	8553170	3	50,99,87,	0,1039,30150,
#Deleted in new
chr4_KI270789v1_alt	144352	144439	chr4_KI270789v1_alt:144352-144439	0	+	144352	144352	8553170	1	87,	0,
#Deleted in new
chr4_KI270790v1_alt	23023	23290	chr4_KI270790v1_alt:23023-23290	0	-	23023	23023	8553170	1	267,	0,
#Deleted in new
chr4_KI270790v1_alt	60771	99558	chr4_KI270790v1_alt:60771-99558	3	+	60771	60771	789624	4	30,158,136,391,	0,122,33874,38396,
#Deleted in new
chr4_KI270790v1_alt	142347	142705	chr4_KI270790v1_alt:142347-142705	7	-	142347	142347	16724991	1	358,	0,
#Deleted in new
chr4_KI270790v1_alt	183185	183610	chr4_KI270790v1_alt:183185-183610	3	-	183185	183273	789624	1	425,	0,
#Deleted in new
chr4_KI270790v1_alt	183285	204862	chr4_KI270790v1_alt:183285-204862	3	+	183285	183285	8553170	2	398,550,	0,21027,
#Deleted in new
chr4_KI270790v1_alt	215685	215948	chr4_KI270790v1_alt:215685-215948	0	-	215685	215685	8553170	1	263,	0,
#Deleted in new
chr4_KI270896v1_alt	37433	38043	chr4_KI270896v1_alt:37433-38043	3	-	37433	37433	8553170	1	610,	0,
#Deleted in new
chr4_KI270896v1_alt	43091	43267	chr4_KI270896v1_alt:43091-43267	3	-	43091	43091	8553170	1	176,	0,
#Deleted in new
chr4_KI270896v1_alt	113888	277801	chr4_KI270896v1_alt:113888-277801	3	-	113888	113888	8553170	3	464,137,102,	0,160838,163811,
#Deleted in new
chr4_KI270896v1_alt	154657	254847	chr4_KI270896v1_alt:154657-254847	1	-	154657	154657	8553170	3	554,194,231,	0,47395,99959,
#Deleted in new
chr4_KI270896v1_alt	155026	277271	chr4_KI270896v1_alt:155026-277271	1	-	155026	155026	8553170	4	185,112,137,83,	0,78014,119700,122162,
#Deleted in new
chr4_KI270896v1_alt	201721	277367	chr4_KI270896v1_alt:201721-277367	1	-	201721	201721	8553170	3	525,137,179,	0,73005,75467,
#Deleted in new
chr4_KI270896v1_alt	219022	222371	chr4_KI270896v1_alt:219022-222371	3	+	219022	219022	789624	2	383,209,	0,3140,
#Deleted in new
chr4_KI270896v1_alt	278317	300735	chr4_KI270896v1_alt:278317-300735	3	+	278539	300660	789624	9	284,71,126,58,115,105,92,111,112,	0,2414,11374,12280,14250,16611,19961,21035,22306,
#Deleted in new
chr4_KI270896v1_alt	278399	299415	chr4_KI270896v1_alt:278399-299415	0	+	289769	299415	789624	7	202,96,71,126,105,92,63,	0,1039,2332,11292,16529,19879,20953,
#Deleted in new
chr4_KI270896v1_alt	278428	292681	chr4_KI270896v1_alt:278428-292681	0	+	278539	279429	789624	6	173,172,71,126,58,114,	0,934,2303,11263,12169,14139,
#Deleted in new
chr4_KI270896v1_alt	278430	295033	chr4_KI270896v1_alt:278430-295033	0	+	289747	295033	789624	7	171,92,71,126,58,115,105,	0,1008,2301,11261,12167,14137,16498,
#Deleted in new
chr4_KI270896v1_alt	278553	298707	chr4_KI270896v1_alt:278553-298707	0	+	278553	278553	8553170	7	48,71,126,58,115,105,315,	0,2178,11138,12044,14014,16375,19839,
#Deleted in new
chr4_KI270896v1_alt	298278	300719	chr4_KI270896v1_alt:298278-300719	0	+	298278	299393	789624	4	92,122,111,96,	0,681,1074,2345,
#Deleted in new
chr4_KI270896v1_alt	298612	300733	chr4_KI270896v1_alt:298612-300733	0	+	298612	298612	8553170	3	119,111,110,	0,740,2011,
#Deleted in new
chr4_KI270896v1_alt	311129	311378	chr4_KI270896v1_alt:311129-311378	7	-	311129	311129	16724991	1	249,	0,
#Deleted in new
chr4_KI270896v1_alt	317432	318138	chr4_KI270896v1_alt:317432-318138	7	+	317432	317432	16724991	1	706,	0,
#Deleted in new
chr4_KI270896v1_alt	320053	322402	chr4_KI270896v1_alt:320053-322402	7	-	320053	320053	16724991	4	1028,111,109,57,	0,1732,1921,2292,
#Deleted in new
chr4_KI270896v1_alt	352668	352786	chr4_KI270896v1_alt:352668-352786	3	+	352668	352668	8553170	1	118,	0,
#Deleted in new
chr4_KI270896v1_alt	355226	355345	chr4_KI270896v1_alt:355226-355345	3	+	355226	355226	8553170	1	119,	0,
#Deleted in new
chr4_KI270896v1_alt	358937	360196	chr4_KI270896v1_alt:358937-360196	7	-	358937	358937	16724991	1	1259,	0,
#Deleted in new
chr4_KI270896v1_alt	361881	364785	chr4_KI270896v1_alt:361881-364785	3	-	363091	364735	789624	4	1716,78,78,228,	0,2033,2340,2676,
#Deleted in new
chr4_KI270896v1_alt	361897	364788	chr4_KI270896v1_alt:361897-364788	1	-	363091	364735	789624	4	1700,78,75,231,	0,2017,2324,2660,
#Deleted in new
chr4_KI270896v1_alt	375446	375930	chr4_KI270896v1_alt:375446-375930	7	-	375446	375446	16724991	1	484,	0,
#Deleted in new
chr4_KI270925v1_alt	111107	113335	chr4_KI270925v1_alt:111107-113335	7	+	111107	111107	16724991	1	2228,	0,
#Deleted in new
chr4_KI270925v1_alt	111289	113333	chr4_KI270925v1_alt:111289-113333	4	+	111289	111289	16724991	4	331,277,259,388,	0,751,1316,1656,
#Deleted in new
chr4_KI270925v1_alt	307216	309097	chr4_KI270925v1_alt:307216-309097	3	+	307216	307216	789624	3	125,209,545,	0,320,1336,
#Deleted in new
chr4_KI270925v1_alt	352609	353219	chr4_KI270925v1_alt:352609-353219	3	-	352609	352609	8553170	1	610,	0,
#Deleted in new
chr4_KI270925v1_alt	358267	358443	chr4_KI270925v1_alt:358267-358443	3	-	358267	358267	8553170	1	176,	0,
#Deleted in new
chr4_KI270925v1_alt	429064	429528	chr4_KI270925v1_alt:429064-429528	1	-	429064	429064	8553170	1	464,	0,
#Deleted in new
chr4_KI270925v1_alt	469840	513515	chr4_KI270925v1_alt:469840-513515	1	-	469840	469840	8553170	2	554,194,	0,43481,
#Deleted in new
chr4_KI270925v1_alt	470209	544372	chr4_KI270925v1_alt:470209-544372	3	-	470209	470209	8553170	2	185,112,	0,74051,
#Deleted in new
chr4_KI270925v1_alt	512990	513515	chr4_KI270925v1_alt:512990-513515	1	-	512990	512990	8553170	1	525,	0,
#Deleted in new
chr4_KI270925v1_alt	530243	533597	chr4_KI270925v1_alt:530243-533597	3	+	530243	530243	789624	2	383,209,	0,3145,
#Deleted in new
chr4_KQ090014v1_alt	126752	140264	chr4_KQ090014v1_alt:126752-140264	3	+	126752	126752	8553170	2	82,470,	0,13042,
#Deleted in new
chr4_KQ090015v1_alt	36065	42589	chr4_KQ090015v1_alt:36065-42589	1	+	38573	41085	789624	6	96,66,21,30,120,265,	0,2493,3737,3850,4933,6259,
#Deleted in new
chr4_KQ090015v1_alt	36066	42590	chr4_KQ090015v1_alt:36066-42590	3	+	38573	41085	789624	6	95,66,21,30,120,266,	0,2492,3736,3849,4932,6258,
#Deleted in new
chr4_KQ090015v1_alt	36101	39280	chr4_KQ090015v1_alt:36101-39280	0	+	36101	36101	8553170	2	60,722,	0,2457,
#Deleted in new
chr4_KQ090015v1_alt	36101	42591	chr4_KQ090015v1_alt:36101-42591	1	+	38573	41085	789624	5	60,66,21,120,267,	0,2457,3701,4897,6223,
#Deleted in new
chr4_KQ090015v1_alt	36101	40503	chr4_KQ090015v1_alt:36101-40503	0	+	36101	36101	8553170	4	60,66,21,588,	0,2457,3701,3814,
#Deleted in new
chr4_KQ090015v1_alt	36104	40487	chr4_KQ090015v1_alt:36104-40487	0	+	36104	36104	8553170	3	57,66,685,	0,2454,3698,
#Deleted in new
chr4_KQ090015v1_alt	38485	40308	chr4_KQ090015v1_alt:38485-40308	0	+	38485	38485	8553170	2	139,506,	0,1317,
#Deleted in new
chr4_KQ090015v1_alt	40916	42706	chr4_KQ090015v1_alt:40916-42706	0	+	40916	40916	8553170	2	202,382,	0,1408,
#Deleted in new
chr4_KQ090015v1_alt	68548	76674	chr4_KQ090015v1_alt:68548-76674	3	+	70876	73356	789624	6	104,64,21,30,87,272,	0,2315,3566,3665,4754,7854,
#Deleted in new
chr4_KQ090015v1_alt	68590	74548	chr4_KQ090015v1_alt:68590-74548	1	+	70876	73356	789624	6	62,64,21,30,87,511,	0,2273,3524,3623,4712,5447,
#Deleted in new
chr4_KQ090015v1_alt	68594	71544	chr4_KQ090015v1_alt:68594-71544	0	+	68594	68594	8553170	2	58,681,	0,2269,
#Deleted in new
chr4_KQ090015v1_alt	68594	73682	chr4_KQ090015v1_alt:68594-73682	0	+	68594	68594	8553170	4	58,64,129,380,	0,2269,3520,4708,
#Deleted in new
chr4_KQ090015v1_alt	68594	76663	chr4_KQ090015v1_alt:68594-76663	0	+	68594	68594	8553170	5	58,64,129,87,261,	0,2269,3520,4708,7808,
#Deleted in new
chr4_KQ090015v1_alt	68594	76665	chr4_KQ090015v1_alt:68594-76665	1	+	70876	73356	789624	5	58,64,21,87,263,	0,2269,3520,4708,7808,
#Deleted in new
chr4_KQ090015v1_alt	90537	98981	chr4_KQ090015v1_alt:90537-98981	3	+	93212	95705	789624	6	94,64,21,30,105,266,	0,2662,3920,4019,5096,8178,
#Deleted in new
chr4_KQ090015v1_alt	90573	96083	chr4_KQ090015v1_alt:90573-96083	1	+	93212	95705	789624	5	58,64,21,30,450,	0,2626,3884,3983,5060,
#Deleted in new
chr4_KQ090015v1_alt	90573	95980	chr4_KQ090015v1_alt:90573-95980	0	+	90573	90573	8553170	4	58,64,129,347,	0,2626,3884,5060,
#Deleted in new
chr4_KQ090015v1_alt	90577	98977	chr4_KQ090015v1_alt:90577-98977	1	+	93212	95705	789624	6	54,64,21,30,105,262,	0,2622,3880,3979,5056,8138,
#Deleted in new
chr4_KQ090015v1_alt	93017	98981	chr4_KQ090015v1_alt:93017-98981	0	+	93017	93017	8553170	3	246,129,3348,	0,1440,2616,
#Deleted in new
chr4_KQ090015v1_alt	107524	125389	chr4_KQ090015v1_alt:107524-125389	7	+	107524	107524	16724991	13	44,63,30,24,27,27,24,45,24,24,124,46,277,	0,1666,3040,3844,5145,5619,6730,6838,11368,12341,14075,15277,17588,
#Deleted in new
chr4_KQ090015v1_alt	109202	111371	chr4_KQ090015v1_alt:109202-111371	5	+	109202	109202	16724991	3	51,30,3,	0,1362,2166,
#Deleted in new
chr4_KQ090015v1_alt	109221	125236	chr4_KQ090015v1_alt:109221-125236	4	+	109221	109221	16724991	10	32,30,27,24,45,24,24,124,46,124,	0,1343,3448,5033,5141,9671,10644,12378,13580,15891,
#Deleted in new
chr4_KQ090015v1_alt	114164	125406	chr4_KQ090015v1_alt:114164-125406	5	+	114164	114164	16724991	7	114,45,24,24,124,46,294,	0,198,4728,5701,7435,8637,10948,
#Deleted in new
chr4_KQ090015v1_alt	178201	203363	chr4_KQ090015v1_alt:178201-203363	0	+	178201	178201	8553170	11	45,25,27,24,45,126,43,62,46,19,205,	0,2432,6293,7776,7892,8812,9548,20749,21130,22438,24957,
#Deleted in new
chr4_KQ090015v1_alt	196661	209521	chr4_KQ090015v1_alt:196661-209521	3	+	198961	206183	789624	6	62,62,24,573,45,2241,	0,2289,3978,6252,9510,10619,
#Deleted in new
chr4_KQ090015v1_alt	198772	209525	chr4_KQ090015v1_alt:198772-209525	1	+	198961	206183	789624	5	240,24,573,45,2245,	0,1867,4141,7399,8508,
#Deleted in new
chr4_KQ090015v1_alt	198828	211192	chr4_KQ090015v1_alt:198828-211192	0	+	198961	199361	789624	6	184,46,24,573,45,3912,	0,503,1811,4085,7343,8452,
#Deleted in new
chr4_KQ090015v1_alt	203313	221385	chr4_KQ090015v1_alt:203313-221385	0	+	203313	206183	789624	6	173,45,283,41,42,57,	0,2858,3967,7030,7918,18015,
#Deleted in new
chr4_KQ983257v1_fix	33717	56134	chr4_KQ983257v1_fix:33717-56134	1	+	33939	56059	789624	9	284,71,126,58,115,105,92,111,112,	0,2414,11374,12280,14249,16610,19960,21034,22305,
#Deleted in new
chr4_KQ983257v1_fix	33799	54814	chr4_KQ983257v1_fix:33799-54814	2	+	45169	54814	8553170	7	202,96,71,126,105,92,63,	0,1039,2332,11292,16528,19878,20952,
#Deleted in new
chr4_KQ983257v1_fix	33828	48080	chr4_KQ983257v1_fix:33828-48080	0	+	33939	34829	8553170	6	173,172,71,126,58,114,	0,934,2303,11263,12169,14138,
#Deleted in new
chr4_KQ983257v1_fix	33830	50432	chr4_KQ983257v1_fix:33830-50432	0	+	45147	50432	8553170	7	171,92,71,126,58,115,105,	0,1008,2301,11261,12167,14136,16497,
#Deleted in new
chr4_KQ983257v1_fix	33953	54106	chr4_KQ983257v1_fix:33953-54106	0	+	33953	33953	8553170	7	48,71,126,58,115,105,315,	0,2178,11138,12044,14013,16374,19838,
#Deleted in new
chr4_KQ983257v1_fix	53677	56118	chr4_KQ983257v1_fix:53677-56118	0	+	53677	54792	8553170	4	92,122,111,96,	0,681,1074,2345,
#Deleted in new
chr4_KQ983257v1_fix	54011	56132	chr4_KQ983257v1_fix:54011-56132	0	+	54011	54011	8553170	3	119,111,110,	0,740,2011,
#Deleted in new
chr4_KQ983257v1_fix	66528	66777	chr4_KQ983257v1_fix:66528-66777	7	-	66528	66528	16724991	1	249,	0,
#Deleted in new
chr4_KQ983257v1_fix	72831	75309	chr4_KQ983257v1_fix:72831-75309	7	+	72831	72831	16724991	6	180,263,124,93,117,112,	0,231,583,1332,1797,2366,
#Deleted in new
chr4_KQ983257v1_fix	75452	77801	chr4_KQ983257v1_fix:75452-77801	7	-	75452	75452	16724991	4	1028,111,109,57,	0,1732,1921,2292,
#Deleted in new
chr4_KQ983257v1_fix	107729	107847	chr4_KQ983257v1_fix:107729-107847	7	+	107729	107729	16724991	1	118,	0,
#Deleted in new
chr4_KQ983257v1_fix	110289	110408	chr4_KQ983257v1_fix:110289-110408	7	+	110289	110289	16724991	1	119,	0,
#Deleted in new
chr4_KQ983257v1_fix	114007	115266	chr4_KQ983257v1_fix:114007-115266	7	-	114007	114007	16724991	1	1259,	0,
#Deleted in new
chr4_KQ983257v1_fix	116954	119843	chr4_KQ983257v1_fix:116954-119843	1	-	118146	119790	789624	4	1698,78,75,231,	0,2015,2322,2658,
#Deleted in new
chr4_KQ983257v1_fix	116954	119843	chr4_KQ983257v1_fix:116954-119843	3	-	118146	119790	789624	4	1698,78,75,231,	0,2015,2322,2658,
#Deleted in new
chr4_KQ983257v1_fix	130672	131156	chr4_KQ983257v1_fix:130672-131156	7	-	130672	130672	16724991	1	484,	0,
#Deleted in new
chr4_KQ983257v1_fix	160549	161824	chr4_KQ983257v1_fix:160549-161824	7	+	160549	160549	16724991	1	1275,	0,
#Deleted in new
chr4_KQ983257v1_fix	163855	165127	chr4_KQ983257v1_fix:163855-165127	3	+	163855	165127	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	163855	165127	chr4_KQ983257v1_fix:163855-165127	1	+	163855	165127	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	167161	168433	chr4_KQ983257v1_fix:167161-168433	1	+	167161	168433	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	167161	168433	chr4_KQ983257v1_fix:167161-168433	3	+	167161	168433	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	170467	171739	chr4_KQ983257v1_fix:170467-171739	1	+	170467	171739	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	170467	171739	chr4_KQ983257v1_fix:170467-171739	3	+	170467	171739	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	173773	175045	chr4_KQ983257v1_fix:173773-175045	1	+	173773	175045	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	173773	175045	chr4_KQ983257v1_fix:173773-175045	3	+	173773	175045	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	177079	178351	chr4_KQ983257v1_fix:177079-178351	1	+	177079	178351	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	177079	178351	chr4_KQ983257v1_fix:177079-178351	3	+	177079	178351	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	180385	181657	chr4_KQ983257v1_fix:180385-181657	1	+	180385	181657	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	180385	181657	chr4_KQ983257v1_fix:180385-181657	3	+	180385	181657	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	183691	184963	chr4_KQ983257v1_fix:183691-184963	1	+	183691	184963	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	183691	184963	chr4_KQ983257v1_fix:183691-184963	3	+	183691	184963	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	186997	188269	chr4_KQ983257v1_fix:186997-188269	1	+	186997	188269	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	186997	188269	chr4_KQ983257v1_fix:186997-188269	3	+	186997	188269	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	190303	191575	chr4_KQ983257v1_fix:190303-191575	3	+	190303	191575	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	190303	191575	chr4_KQ983257v1_fix:190303-191575	1	+	190303	191575	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	193609	194881	chr4_KQ983257v1_fix:193609-194881	1	+	193609	194881	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	193609	194881	chr4_KQ983257v1_fix:193609-194881	3	+	193609	194881	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	196915	198187	chr4_KQ983257v1_fix:196915-198187	1	+	196915	198187	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	196915	198187	chr4_KQ983257v1_fix:196915-198187	3	+	196915	198187	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	200221	201493	chr4_KQ983257v1_fix:200221-201493	3	+	200221	201493	0	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	200221	201493	chr4_KQ983257v1_fix:200221-201493	1	+	200221	201493	0	1	1272,	0,
#Deleted in new
chr4_KQ983257v1_fix	221605	222069	chr4_KQ983257v1_fix:221605-222069	7	+	221605	221605	16724991	1	464,	0,
#Deleted in new
chr4_KQ983257v1_fix	221616	221857	chr4_KQ983257v1_fix:221616-221857	7	-	221616	221616	16724991	1	241,	0,
#Deleted in new
chr4_KQ983258v1_alt	33717	56134	chr4_KQ983258v1_alt:33717-56134	3	+	33939	56059	789624	9	284,71,126,58,115,105,92,111,112,	0,2414,11374,12280,14249,16610,19960,21034,22305,
#Deleted in new
chr4_KQ983258v1_alt	33799	54814	chr4_KQ983258v1_alt:33799-54814	0	+	45169	54814	789624	7	202,96,71,126,105,92,63,	0,1039,2332,11292,16528,19878,20952,
#Deleted in new
chr4_KQ983258v1_alt	33828	48080	chr4_KQ983258v1_alt:33828-48080	0	+	33939	34829	789624	6	173,172,71,126,58,114,	0,934,2303,11263,12169,14138,
#Deleted in new
chr4_KQ983258v1_alt	33830	50432	chr4_KQ983258v1_alt:33830-50432	0	+	45147	50432	789624	7	171,92,71,126,58,115,105,	0,1008,2301,11261,12167,14136,16497,
#Deleted in new
chr4_KQ983258v1_alt	33953	54106	chr4_KQ983258v1_alt:33953-54106	0	+	33953	33953	8553170	7	48,71,126,58,115,105,315,	0,2178,11138,12044,14013,16374,19838,
#Deleted in new
chr4_KQ983258v1_alt	53677	56118	chr4_KQ983258v1_alt:53677-56118	0	+	53677	54792	789624	4	92,122,111,96,	0,681,1074,2345,
#Deleted in new
chr4_KQ983258v1_alt	54011	56132	chr4_KQ983258v1_alt:54011-56132	0	+	54011	54011	8553170	3	119,111,110,	0,740,2011,
#Deleted in new
chr4_KQ983258v1_alt	66528	66777	chr4_KQ983258v1_alt:66528-66777	7	-	66528	66528	16724991	1	249,	0,
#Deleted in new
chr4_KQ983258v1_alt	72831	75309	chr4_KQ983258v1_alt:72831-75309	7	+	72831	72831	16724991	6	180,263,124,93,117,112,	0,231,583,1332,1797,2366,
#Deleted in new
chr4_KQ983258v1_alt	75452	77801	chr4_KQ983258v1_alt:75452-77801	7	-	75452	75452	16724991	4	1028,111,109,57,	0,1732,1921,2292,
#Deleted in new
chr4_KQ983258v1_alt	107729	107847	chr4_KQ983258v1_alt:107729-107847	7	+	107729	107729	16724991	1	118,	0,
#Deleted in new
chr4_KQ983258v1_alt	110289	110408	chr4_KQ983258v1_alt:110289-110408	7	+	110289	110289	16724991	1	119,	0,
#Deleted in new
chr4_KQ983258v1_alt	114007	115266	chr4_KQ983258v1_alt:114007-115266	7	-	114007	114007	16724991	1	1259,	0,
#Deleted in new
chr4_KQ983258v1_alt	116954	119843	chr4_KQ983258v1_alt:116954-119843	1	-	118146	119790	789624	4	1698,78,75,231,	0,2015,2322,2658,
#Deleted in new
chr4_KQ983258v1_alt	116954	119843	chr4_KQ983258v1_alt:116954-119843	3	-	118146	119790	789624	4	1698,78,75,231,	0,2015,2322,2658,
#Deleted in new
chr4_KQ983258v1_alt	130672	131156	chr4_KQ983258v1_alt:130672-131156	7	-	130672	130672	16724991	1	484,	0,
#Deleted in new
chr4_KQ983258v1_alt	160549	161824	chr4_KQ983258v1_alt:160549-161824	7	+	160549	160549	16724991	1	1275,	0,
#Deleted in new
chr4_KQ983258v1_alt	163855	165127	chr4_KQ983258v1_alt:163855-165127	1	+	163855	165127	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	163855	165127	chr4_KQ983258v1_alt:163855-165127	3	+	163855	165127	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	167161	168433	chr4_KQ983258v1_alt:167161-168433	1	+	167161	168433	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	167161	168433	chr4_KQ983258v1_alt:167161-168433	3	+	167161	168433	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	170467	171739	chr4_KQ983258v1_alt:170467-171739	1	+	170467	171739	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	170467	171739	chr4_KQ983258v1_alt:170467-171739	3	+	170467	171739	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	173773	175045	chr4_KQ983258v1_alt:173773-175045	1	+	173773	175045	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	173773	175045	chr4_KQ983258v1_alt:173773-175045	3	+	173773	175045	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	177079	178351	chr4_KQ983258v1_alt:177079-178351	1	+	177079	178351	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	177079	178351	chr4_KQ983258v1_alt:177079-178351	3	+	177079	178351	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	180385	181657	chr4_KQ983258v1_alt:180385-181657	1	+	180385	181657	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	180385	181657	chr4_KQ983258v1_alt:180385-181657	3	+	180385	181657	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	183691	184963	chr4_KQ983258v1_alt:183691-184963	1	+	183691	184963	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	183691	184963	chr4_KQ983258v1_alt:183691-184963	3	+	183691	184963	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	186997	188269	chr4_KQ983258v1_alt:186997-188269	1	+	186997	188269	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	186997	188269	chr4_KQ983258v1_alt:186997-188269	3	+	186997	188269	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	190303	191575	chr4_KQ983258v1_alt:190303-191575	1	+	190303	191575	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	190303	191575	chr4_KQ983258v1_alt:190303-191575	3	+	190303	191575	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	193609	194881	chr4_KQ983258v1_alt:193609-194881	1	+	193609	194881	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	193609	194881	chr4_KQ983258v1_alt:193609-194881	3	+	193609	194881	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	196915	198187	chr4_KQ983258v1_alt:196915-198187	1	+	196915	198187	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	196915	198187	chr4_KQ983258v1_alt:196915-198187	3	+	196915	198187	8553170	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	200221	201493	chr4_KQ983258v1_alt:200221-201493	3	+	200221	201493	789624	1	1272,	0,
#Deleted in new
chr4_KQ983258v1_alt	200221	201493	chr4_KQ983258v1_alt:200221-201493	1	+	200221	201493	789624	1	1272,	0,
#Deleted in new
chr4_KV766193v1_alt	62659	226448	chr4_KV766193v1_alt:62659-226448	3	+	62659	62659	8553170	5	121,84,86,119,567,	0,66717,71937,137137,163222,
#Deleted in new
chr4_KV766193v1_alt	129448	197089	chr4_KV766193v1_alt:129448-197089	0	+	129448	129448	8553170	3	12,86,399,	0,5148,67242,
#Deleted in new
chr4_KV766193v1_alt	163608	165227	chr4_KV766193v1_alt:163608-165227	3	+	163608	163608	8553170	1	1619,	0,
#Deleted in new
chr4_KV766193v1_alt	189363	189822	chr4_KV766193v1_alt:189363-189822	3	+	189363	189363	8553170	1	459,	0,
#Deleted in new
chr4_KV766193v1_alt	196692	226150	chr4_KV766193v1_alt:196692-226150	1	+	196692	196692	8553170	3	167,119,269,	0,3104,29189,
#Deleted in new
chr4_KV766193v1_alt	301514	301976	chr4_KV766193v1_alt:301514-301976	7	+	301514	301514	16724991	1	462,	0,
#Deleted in new
chr5	58197	58915	chr5:58197-58915	7	+	58197	58197	16724991	1	718,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr5	92150	189970	chr5:92150-189970	1	+	92231	182323	789624	20	126,198,1234,210,124,94,87,117,99,140,139,162,827,253,90,231,171,181,162,7967,	0,21100,47332,50896,51229,52676,59362,62724,63194,63920,64622,69632,70571,77189,78892,79063,80746,81767,89363,89853,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr5	140257	189972	chr5:140257-189972	3	+	140307	182323	789624	18	459,210,124,94,87,117,99,140,139,162,827,253,90,231,171,181,162,7969,	0,2789,3122,4569,11255,14617,15087,15813,16515,21525,22464,29082,30785,30956,32639,33660,41256,41746,
#Partially deleted in new
chr5	140565	157110	chr5:140565-157110	0	+	140565	157016	789624	9	151,210,124,94,87,117,99,140,338,	0,2481,2814,4261,10947,14309,14779,15505,16207,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	144086	144197	chr5:144086-144197	3	-	144086	144086	8553170	1	111,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	169052	182589	chr5:169052-182589	0	+	169052	169052	8553170	8	540,90,231,171,181,204,162,586,	0,1990,2161,3844,4865,10498,12461,12951,
#Deleted in new
chr5	191510	195353	chr5:191510-195353	3	+	191538	195353	789624	2	927,646,	0,3197,
#Deleted in new
chr5	195777	196341	chr5:195777-196341	3	+	195777	195777	8553170	1	564,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	196870	218215	chr5:196870-218215	3	-	205296	216849	789624	3	9088,131,123,	0,19858,21222,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	205872	217218	chr5:205872-217218	0	-	205872	216849	789624	2	86,490,	0,10856,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	213897	217279	chr5:213897-217279	3	-	213897	213897	8553170	2	2795,86,	0,3296,
#Partially deleted in new
chr5	218240	256700	chr5:218240-256700	3	+	218355	256420	789624	15	178,87,162,144,165,149,125,169,196,172,119,112,131,114,367,	0,5241,6119,7178,7642,9944,12635,15236,16903,18187,22117,32751,33097,36152,38093,
#Partially deleted in new
chr5	218240	256697	chr5:218240-256697	1	+	218355	256420	789624	13	178,87,162,68,80,169,196,172,119,112,131,114,364,	0,5241,6119,7178,12680,15236,16903,18187,22117,32751,33097,36152,38093,
#Partially deleted in new
chr5	218302	256682	chr5:218302-256682	1	+	218355	256420	789624	13	116,87,162,144,165,149,125,169,196,172,119,114,349,	0,5179,6057,7116,7580,9882,12573,15174,16841,18125,22055,36090,38031,
#Partially deleted in new
chr5	218310	224843	chr5:218310-224843	0	+	218310	218310	8553170	3	108,87,484,	0,5171,6049,
#Partially deleted in new
chr5	218315	251864	chr5:218315-251864	0	+	218315	218315	8553170	13	103,87,162,144,165,149,125,169,196,172,119,112,527,	0,5166,6044,7103,7567,9869,12560,15161,16828,18112,22042,32676,33022,
#Partially deleted in new
chr5	218317	256679	chr5:218317-256679	1	+	218355	256420	789624	14	101,87,162,165,149,125,169,196,172,119,112,131,114,346,	0,5164,6042,7565,9867,12558,15159,16826,18110,22040,32674,33020,36075,38016,
#Partially deleted in new
chr5	218326	225562	chr5:218326-225562	0	+	218355	224381	789624	5	92,98,87,162,144,	0,1913,5155,6033,7092,
#Partially deleted in new
chr5	218370	235524	chr5:218370-235524	0	+	218370	218370	8553170	9	48,87,162,144,165,149,125,169,381,	0,5111,5989,7048,7512,9814,12505,15106,16773,
#Partially deleted in new
chr5	225632	230891	chr5:225632-230891	0	+	225632	225632	8553170	3	415,149,16,	0,2552,5243,
#Partially deleted in new
chr5	227608	256679	chr5:227608-256679	0	+	227608	227608	8553170	10	725,125,169,196,172,119,112,131,114,346,	0,3267,5868,7535,8819,12749,23383,23729,26784,28725,
#Partially deleted in new
chr5	227625	233629	chr5:227625-233629	0	+	227625	227625	8553170	4	131,149,125,153,	0,559,3250,5851,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	230942	236516	chr5:230942-236516	0	+	230942	230942	8553170	3	58,662,215,	0,2534,5359,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	230942	256648	chr5:230942-256648	0	+	230942	230942	8553170	8	58,662,298,119,112,131,114,315,	0,2534,5359,9415,20049,20395,23450,25391,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	234420	256679	chr5:234420-256679	0	+	234420	234420	8553170	6	2179,119,112,131,114,346,	0,5937,16571,16917,19972,21913,
#Partially deleted in new
chr5	236512	256682	chr5:236512-256682	0	+	236512	256358	789624	4	87,119,149,349,	0,3845,17845,19821,
#Partially deleted in new
chr5	240443	256682	chr5:240443-256682	0	+	240443	240443	8553170	3	33,52,349,	0,10548,15890,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	249053	256679	chr5:249053-256679	0	+	249053	249053	8553170	5	1723,112,131,114,346,	0,1938,2284,5339,7280,
#Deleted in new
chr5	250693	251359	chr5:250693-251359	0	+	250693	250693	8553170	2	410,22,	0,644,
#Partially deleted in new
chr5	251336	256682	chr5:251336-256682	0	+	251336	256358	789624	3	132,149,349,	0,3021,4997,
#Partially deleted in new
chr5	251340	256679	chr5:251340-256679	0	+	251340	251340	8553170	4	128,73,114,329,	0,1667,3052,5010,
#Partially deleted in new
chr5	269857	271516	chr5:269857-271516	3	-	269857	269857	789624	2	350,172,	0,1487,
#Partially deleted in new
chr5	271620	314974	chr5:271620-314974	3	+	271720	314515	0	6	201,62,45,159,110,558,	0,1090,32556,34981,39672,42796,
#Partially deleted in new
chr5	271620	314974	chr5:271620-314974	1	+	306603	314515	789624	7	70,46,62,45,159,110,558,	0,155,1090,32556,34981,39672,42796,
#Partially deleted in new
chr5	271620	314974	chr5:271620-314974	1	+	271720	314515	789624	4	201,62,110,558,	0,1090,39672,42796,
#Partially deleted in new
chr5	271620	314974	chr5:271620-314974	1	+	271720	304195	789624	5	201,45,159,110,558,	0,32556,34981,39672,42796,
#Deleted in new
chr5	271623	273367	chr5:271623-273367	0	+	271623	271623	8553170	2	198,657,	0,1087,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	271624	314969	chr5:271624-314969	0	+	271624	271624	8553170	5	197,62,2578,110,553,	0,1086,32552,39668,42792,
#Partially deleted in new
chr5	271646	314806	chr5:271646-314806	1	+	271720	314418	0	4	175,62,45,390,	0,1064,32530,42770,
#Partially deleted in new
chr5	271656	314969	chr5:271656-314969	1	+	271720	314515	0	6	165,62,45,153,110,553,	0,1054,32520,34945,39636,42760,
#Partially deleted in new
chr5	271656	276940	chr5:271656-276940	1	+	271720	276016	789624	3	165,62,929,	0,1054,4355,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	271660	312411	chr5:271660-312411	0	+	271720	304195	789624	4	161,45,159,1119,	0,32516,34941,39632,
#Partially deleted in new
chr5	271669	353856	chr5:271669-353856	0	+	271720	343906	789624	5	152,62,45,72,127,	0,1041,32507,72223,82060,
#Partially deleted in new
chr5	272711	314686	chr5:272711-314686	0	+	272711	314515	789624	4	61,45,110,270,	0,31465,38581,41705,
#Deleted in new
chr5	288832	290321	chr5:288832-290321	7	-	288832	288832	16724991	2	324,879,	0,610,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	304175	438291	chr5:304175-438291	3	+	304219	434834	0	12	46,72,182,107,90,130,137,54,200,62,142,4439,	0,39717,49554,72434,109168,118553,119665,123461,123631,128287,128630,129677,
#Partially deleted in new
chr5	304175	434857	chr5:304175-434857	1	+	304219	434834	0	11	46,72,182,107,90,130,137,200,62,142,1005,	0,39717,49554,72434,109168,118553,119665,123631,128287,128630,129677,
#Partially deleted in new
chr5	304183	434893	chr5:304183-434893	1	+	422737	434834	789624	9	38,72,90,130,137,200,62,142,1041,	0,39709,109160,118545,119657,123623,128279,128622,129669,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	306680	314954	chr5:306680-314954	0	+	306680	306680	8553170	4	80,110,150,538,	0,4612,7020,7736,
#Partially deleted in new
chr5	308196	314973	chr5:308196-314973	0	+	308196	308196	8553170	2	3206,557,	0,6220,
#Partially deleted in new
chr5	321758	422774	chr5:321758-422774	0	+	422737	422774	789624	6	61,77,182,107,90,46,	0,22134,31971,54851,91585,100970,
#Partially deleted in new
chr5	322569	422760	chr5:322569-422760	0	+	343902	422760	789624	6	93,72,182,107,90,32,	0,21323,31160,54040,90774,100159,
#Partially deleted in new
chr5	322639	367992	chr5:322639-367992	1	+	343902	367983	789624	4	23,72,182,185,	0,21253,31090,45168,
#Partially deleted in new
chr5	343527	353911	chr5:343527-353911	0	+	343902	353911	789624	3	181,72,182,	0,365,10202,
#Deleted in new
chr5	403730	404546	chr5:403730-404546	7	-	403730	403730	16724991	1	816,	0,
#Deleted in new
chr5	418702	419109	chr5:418702-419109	7	+	418702	418702	16724991	1	407,	0,
#Partially deleted in new
chr5	420919	435110	chr5:420919-435110	1	+	421319	434834	789624	7	421,130,137,200,62,142,1258,	0,1809,2921,6887,11543,11886,12933,
#Deleted in new
chr5	422376	423927	chr5:422376-423927	0	+	422376	422376	8553170	2	482,87,	0,1464,
#Partially deleted in new
chr5	427917	434409	chr5:427917-434409	0	+	427917	434409	789624	2	89,557,	0,5935,
#Deleted in new
chr5	432024	435109	chr5:432024-435109	0	+	432024	432024	8553170	2	923,1257,	0,1828,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	441497	443160	chr5:441497-443160	3	-	441497	441497	8553170	1	1663,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	441529	443143	chr5:441529-443143	0	-	441529	441529	789624	1	1614,	0,
#Partially deleted in new
chr5	443157	467296	chr5:443157-467296	3	+	446205	466898	789624	13	133,200,220,682,118,126,101,111,151,123,162,128,570,	0,2992,4375,10212,13731,14742,16201,18802,18999,21132,21953,22560,23569,
#Partially deleted in new
chr5	443174	447314	chr5:443174-447314	0	+	443174	443174	8553170	3	116,200,297,	0,2975,3843,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	443232	471937	chr5:443232-471937	0	+	446205	462388	789624	12	58,200,220,682,111,373,983,128,1883,73,198,839,	0,2917,4300,10137,18727,18924,21057,22485,23494,25637,26557,27866,
#Partially deleted in new
chr5	443267	447594	chr5:443267-447594	0	+	446205	447594	789624	4	23,139,200,62,	0,1658,2882,4265,
#Partially deleted in new
chr5	446148	467285	chr5:446148-467285	1	+	446205	466898	789624	12	201,220,682,118,126,101,111,151,123,162,128,559,	0,1384,7221,10740,11751,13210,15811,16008,18141,18962,19569,20578,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	453396	471936	chr5:453396-471936	0	+	453396	464448	789624	12	655,118,126,101,111,151,983,128,1883,73,198,838,	0,3492,4503,5962,8563,8760,10893,12321,13330,15473,16393,17702,
#Partially deleted in new
chr5	457005	459580	chr5:457005-459580	0	+	457005	457005	8553170	2	1020,222,	0,2353,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	461629	464728	chr5:461629-464728	0	+	461629	461629	8553170	3	441,151,439,	0,527,2660,
#Deleted in new
chr5	464788	466078	chr5:464788-466078	0	+	464788	464788	8553170	2	484,361,	0,929,
#Partially deleted in new
chr5	466123	472876	chr5:466123-472876	2	-	466123	466123	8553170	2	403,198,	0,6555,
#Deleted in new
chr5	469855	471581	chr5:469855-471581	0	+	469855	469855	8553170	2	132,459,	0,1267,
#Partially deleted in new
chr5	470457	524322	chr5:470457-524322	1	-	472963	524322	789624	16	2925,111,73,177,130,113,130,71,90,203,221,178,79,161,303,211,	0,5103,5562,5744,6085,6874,9378,11107,11610,12090,12804,14062,14695,17858,21311,53654,
#Deleted in new
chr5	470509	473098	chr5:470509-473098	1	-	470509	470509	789624	2	1456,420,	0,2169,
#Deleted in new
chr5	471246	472960	chr5:471246-472960	0	-	471246	471246	8553170	2	577,282,	0,1432,
#Deleted in new
chr5	472106	472743	chr5:472106-472743	0	-	472106	472106	8553170	2	487,65,	0,572,
#Deleted in new
chr5	473235	480467	chr5:473235-480467	1	+	473235	473235	789624	7	164,183,332,93,44,435,106,	0,1901,2996,4008,4570,6546,7126,
#Partially deleted in new
chr5	473309	524332	chr5:473309-524332	3	-	473378	524322	789624	17	73,250,111,73,177,130,113,130,71,90,203,221,178,79,161,303,221,	0,1573,2251,2710,2892,3233,4022,6526,8255,8758,9238,9952,11210,11843,15006,18459,50802,
#Partially deleted in new
chr5	473360	524330	chr5:473360-524330	1	-	473378	524322	789624	17	22,250,111,73,177,130,113,130,71,63,203,221,178,79,161,303,219,	0,1522,2200,2659,2841,3182,3971,6475,8204,8707,9187,9901,11159,11792,14955,18408,50751,
#Deleted in new
chr5	475283	476490	chr5:475283-476490	1	+	475283	475283	8553170	2	36,441,	0,766,
#Deleted in new
chr5	477103	480508	chr5:477103-480508	0	+	477103	477103	8553170	4	233,44,435,147,	0,702,2678,3258,
#Deleted in new
chr5	477243	479950	chr5:477243-479950	3	+	477243	477243	8553170	3	222,44,169,	0,562,2538,
#Deleted in new
chr5	477244	478651	chr5:477244-478651	0	+	477244	477244	8553170	2	221,846,	0,561,
#Deleted in new
chr5	477244	480665	chr5:477244-480665	1	+	477244	477244	8553170	4	92,44,351,304,	0,561,2621,3117,
#Deleted in new
chr5	478122	480884	chr5:478122-480884	0	+	478122	478122	8553170	1	2762,	0,
#Partially deleted in new
chr5	479636	482644	chr5:479636-482644	0	-	479636	479636	8553170	4	329,71,90,97,	0,1928,2431,2911,
#Deleted in new
chr5	524704	526594	chr5:524704-526594	3	+	524704	524704	8553170	2	259,183,	0,1707,
#Deleted in new
chr5	535839	535882	chr5:535839-535882	3	-	535839	535839	789624	1	43,	0,
#Partially deleted in new
chr5	602619	612210	chr5:602619-612210	3	-	602619	602619	789624	3	225,307,59,	0,8827,9532,
#Partially deleted in new
chr5	612271	653553	chr5:612271-653553	3	+	612361	653153	789624	12	172,128,193,109,179,213,302,136,197,127,112,566,	0,6718,7797,12199,21497,23100,25245,26817,28136,32027,35533,40716,
#Partially deleted in new
chr5	644137	653243	chr5:644137-653243	0	+	644137	644137	8553170	3	288,112,256,	0,3667,8850,
#Partially deleted in new
chr5	653025	657093	chr5:653025-657093	0	+	653025	653025	8553170	3	166,129,166,	0,2430,3902,
#Partially deleted in new
chr5	655454	667168	chr5:655454-667168	0	+	655454	655454	8553170	5	130,157,146,159,305,	0,7961,9725,10486,11409,
#Partially deleted in new
chr5	659861	693395	chr5:659861-693395	3	-	665101	678060	789624	4	5435,154,315,118,	0,6108,17888,33416,
#Deleted in new
chr5	675825	676616	chr5:675825-676616	3	+	675825	675825	8553170	1	791,	0,
#Partially deleted in new
chr5	710359	732671	chr5:710359-732671	0	-	710359	710359	8553170	4	1923,65,35,710,	0,6441,20074,21602,
#Partially deleted in new
chr5	711807	766952	chr5:711807-766952	3	-	716807	766952	789624	11	475,65,35,88,35,116,156,125,102,179,255,	0,4993,18626,21944,29786,33375,36596,39325,43190,44158,54890,
#Partially deleted in new
chr5	716807	766919	chr5:716807-766919	1	-	716807	766919	789624	10	58,35,88,35,116,156,125,102,179,222,	0,13626,16944,24786,28375,31596,34325,38190,39158,49890,
#Deleted in new
chr5	747351	751234	chr5:747351-751234	1	-	748118	748548	789624	3	803,404,94,	0,804,3789,
#Deleted in new
chr5	767381	768930	chr5:767381-768930	7	-	767381	767381	16724991	2	143,96,	0,1453,
#Deleted in new
chr5	770004	770113	chr5:770004-770113	7	-	770004	770004	16724991	1	109,	0,
#Partially deleted in new
chr5	795605	842495	chr5:795605-842495	0	-	795605	795605	8553170	12	975,65,35,88,218,35,421,88,35,114,156,1693,	0,5494,19155,23919,25537,26255,27783,29558,38167,41759,44889,45197,
#Partially deleted in new
chr5	795606	850986	chr5:795606-850986	3	-	801106	850602	789624	13	974,65,35,88,35,88,35,116,156,125,102,179,606,	0,5493,19154,23918,26254,29557,38166,41758,44888,47993,51907,52875,54774,
#Partially deleted in new
chr5	795606	801145	chr5:795606-801145	1	-	795758	796477	789624	11	239,18,45,21,123,1,35,21,15,379,46,	0,244,263,309,332,457,519,557,579,595,5493,
#Partially deleted in new
chr5	796324	847599	chr5:796324-847599	0	-	824033	847599	789624	12	256,65,35,88,35,705,88,35,116,156,125,86,	0,4775,18436,23200,25536,27064,28839,37448,41040,44170,47275,51189,
#Deleted in new
chr5	816345	817001	chr5:816345-817001	7	+	816345	816345	16724991	1	656,	0,
#Partially deleted in new
chr5	824007	850505	chr5:824007-850505	0	-	824007	824007	8553170	5	86,88,35,114,65,	0,1156,9765,13357,26433,
#Deleted in new
chr5	837435	849788	chr5:837435-849788	0	-	837435	843605	789624	5	45,103,125,102,139,	0,3059,6164,10078,12214,
#Deleted in new
chr5	839441	843701	chr5:839441-843701	1	-	840210	840639	789624	2	1209,94,	0,4166,
#Deleted in new
chr5	841577	843746	chr5:841577-843746	0	-	841577	841577	8553170	2	342,147,	0,2022,
#Deleted in new
chr5	842408	843693	chr5:842408-843693	0	-	842408	842408	8553170	2	266,94,	0,1191,
#Deleted in new
chr5	843341	847623	chr5:843341-847623	0	-	843341	843341	8553170	2	383,110,	0,4172,
#Deleted in new
chr5	847707	850623	chr5:847707-850623	0	-	847707	847707	8553170	3	73,179,243,	0,774,2673,
#Partially deleted in new
chr5	850290	880098	chr5:850290-880098	0	-	850290	850290	8553170	3	312,133,305,	0,28064,29503,
#Partially deleted in new
chr5	863740	879315	chr5:863740-879315	0	-	863740	863740	8553170	6	828,168,103,39,112,961,	0,1673,6732,7785,12360,14614,
#Partially deleted in new
chr5	863740	892800	chr5:863740-892800	0	-	889739	891752	789624	16	828,168,103,39,112,133,96,76,133,176,111,145,180,133,215,195,	0,1673,6732,7785,12360,14614,16053,17366,20197,22851,23620,25280,25846,27414,27899,28865,
#Partially deleted in new
chr5	863740	890046	chr5:863740-890046	0	-	863740	863740	8553170	13	828,168,103,39,112,133,96,1439,1115,116,111,145,460,	0,1673,6732,7785,12360,14614,16053,17366,19215,22851,23620,25280,25846,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	863740	866501	chr5:863740-866501	0	-	863740	863740	8553170	2	828,1088,	0,1673,
#Partially deleted in new
chr5	864122	892546	chr5:864122-892546	1	-	864467	891752	0	16	446,168,103,39,112,133,96,76,133,116,111,140,61,133,215,38,	0,1291,6350,7403,11978,14232,15671,16984,19815,22469,23238,24898,25464,27032,27517,28386,
#Partially deleted in new
chr5	864272	892824	chr5:864272-892824	3	-	864467	892657	0	16	296,168,103,39,112,133,96,76,133,116,111,145,61,133,215,219,	0,1141,6200,7253,11828,14082,15521,16834,19665,22319,23088,24748,25314,26882,27367,28333,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	870287	883407	chr5:870287-883407	0	-	870287	870287	8553170	6	288,39,112,133,96,76,	0,1238,5813,8067,9506,13044,
#Partially deleted in new
chr5	876108	892559	chr5:876108-892559	0	-	889739	891752	789624	11	104,133,96,133,116,111,145,180,133,215,51,	0,2246,3685,7829,10483,11252,12912,13478,15046,15531,16400,
#Partially deleted in new
chr5	876159	883369	chr5:876159-883369	0	-	876159	876159	8553170	5	53,133,96,76,38,	0,2195,3634,4947,7172,
#Deleted in new
chr5	878354	886907	chr5:878354-886907	0	-	878354	878354	8553170	4	133,96,176,44,	0,1439,8237,8509,
#Partially deleted in new
chr5	883939	891550	chr5:883939-891550	0	-	883939	889699	789624	6	131,176,111,145,180,396,	0,2652,3421,5081,5647,7215,
#Partially deleted in new
chr5	889042	892522	chr5:889042-892522	0	-	889739	891752	789624	5	123,180,133,215,102,	0,544,2112,2597,3378,
#Partially deleted in new
chr5	892642	918120	chr5:892642-918120	3	+	892998	917103	0	13	448,166,130,56,91,73,64,87,107,154,113,70,1113,	0,2144,4022,7851,8698,11505,14487,15345,15712,19200,21822,23261,24365,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	892883	908932	chr5:892883-908932	0	+	892883	892883	8553170	9	207,166,130,56,91,73,64,87,578,	0,1903,3781,7610,8457,11264,14246,15104,15471,
#Partially deleted in new
chr5	893024	896790	chr5:893024-896790	0	+	893024	893024	8553170	3	66,166,81,	0,1762,3685,
#Partially deleted in new
chr5	893641	908074	chr5:893641-908074	0	+	893641	908074	789624	8	79,166,130,56,91,73,64,87,	0,1145,3023,6852,7699,10506,13488,14346,
#Partially deleted in new
chr5	914558	919357	chr5:914558-919357	0	+	914558	914558	8553170	4	19,70,144,338,	0,1345,2449,4461,
#Deleted in new
chr5	915927	917448	chr5:915927-917448	0	+	915927	915927	8553170	3	46,144,113,	0,1080,1408,
#Deleted in new
chr5	917027	917900	chr5:917027-917900	0	+	917027	917027	8553170	2	124,182,	0,691,
#Partially deleted in new
chr5	946314	956520	chr5:946314-956520	3	+	946314	946314	8553170	2	162,397,	0,9809,
#Deleted in new
chr5	979364	981300	chr5:979364-981300	3	+	979364	979364	8553170	2	155,265,	0,1671,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	987179	997308	chr5:987179-997308	3	-	987179	987179	789624	2	3444,38,	0,10091,
#Deleted in new
chr5	1005038	1006623	chr5:1005038-1006623	3	+	1005038	1005038	8553170	1	1585,	0,
#Deleted in new
chr5	1008828	1038943	chr5:1008828-1038943	3	+	1009057	1038373	789624	10	254,36,80,61,128,96,148,85,128,1139,	0,350,652,23323,24543,25406,25927,26560,27428,28976,
#Deleted in new
chr5	1008961	1038682	chr5:1008961-1038682	1	+	1009057	1037668	789624	11	121,36,80,61,128,96,148,85,128,179,878,	0,217,519,23190,24410,25273,25794,26427,27295,28558,28843,
#Deleted in new
chr5	1034135	1036172	chr5:1034135-1036172	0	+	1034135	1034135	8553170	4	195,148,85,63,	0,620,1253,1974,
#Deleted in new
chr5	1034755	1038315	chr5:1034755-1038315	0	+	1034755	1034755	8553170	4	148,85,128,511,	0,633,1501,3049,
#Deleted in new
chr5	1035804	1038284	chr5:1035804-1038284	0	+	1035804	1035804	8553170	2	580,480,	0,2000,
#Partially deleted in new
chr5	1050375	1112035	chr5:1050375-1112035	3	-	1052359	1111991	789624	24	2076,134,179,108,132,170,196,169,105,120,99,119,175,58,99,168,212,242,131,55,147,123,95,168,	0,2973,7095,9968,13468,13707,14907,23257,24191,24995,25762,26318,27457,28325,29022,31201,33369,34856,36527,37930,38606,43157,43778,61492,
#Partially deleted in new
chr5	1052185	1093575	chr5:1052185-1093575	0	-	1052359	1093575	789624	23	266,134,15,179,108,132,170,196,169,105,120,99,119,175,58,99,168,212,242,131,55,147,43,	0,1163,4396,5285,8158,11658,11897,13097,21447,22381,23185,23952,24508,25647,26515,27212,29391,31559,33046,34717,36120,36796,41347,
#Partially deleted in new
chr5	1057210	1063882	chr5:1057210-1063882	0	-	1057210	1057210	8553170	3	439,108,39,	0,3133,6633,
#Partially deleted in new
chr5	1057527	1075434	chr5:1057527-1075434	0	-	1057527	1075434	789624	8	122,108,132,170,196,169,105,64,	0,2816,6316,6555,7755,16105,17039,17843,
#Deleted in new
chr5	1062895	1062974	chr5:1062895-1062974	3	-	1062895	1062895	5263520	1	79,	0,
#Deleted in new
chr5	1073781	1076782	chr5:1073781-1076782	0	-	1076133	1076782	789624	5	20,105,120,346,89,	0,785,1589,2109,2912,
#Partially deleted in new
chr5	1078518	1081658	chr5:1078518-1081658	0	-	1078518	1078518	8553170	3	240,99,82,	0,879,3058,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	1173140	1178605	chr5:1173140-1178605	3	-	1173140	1173140	789624	5	338,107,560,584,168,	0,1383,1988,2820,5297,
#Partially deleted in new
chr5	1175396	1178594	chr5:1175396-1178594	0	-	1175396	1175396	8553170	3	292,574,157,	0,574,3041,
#Partially deleted in new
chr5	1175956	1178546	chr5:1175956-1178546	0	-	1175956	1175956	8553170	2	588,109,	0,2481,
#Partially deleted in new
chr5	1201594	1225117	chr5:1201594-1225117	3	+	1201650	1221904	789624	12	258,141,138,182,111,113,129,157,205,160,163,3417,	0,7151,8849,10708,11868,12358,14963,15194,17308,17910,19556,20106,
#Partially deleted in new
chr5	1201594	1223270	chr5:1201594-1223270	0	+	1201650	1216827	789624	11	258,141,46,182,111,113,388,205,160,163,1570,	0,7151,8941,10708,11868,12358,14963,17308,17910,19556,20106,
#Partially deleted in new
chr5	1225354	1246189	chr5:1225354-1246189	3	+	1225477	1246078	789624	12	283,141,138,182,111,113,129,157,205,160,160,342,	0,6864,7396,10126,12595,14095,15176,17352,18200,18859,19253,20493,
#Partially deleted in new
chr5	1225408	1232839	chr5:1225408-1232839	0	+	1225408	1225408	8553170	3	229,141,89,	0,6810,7342,
#Partially deleted in new
chr5	1253146	1283010	chr5:1253146-1283010	0	-	1253146	1253146	8553170	11	685,138,125,62,127,72,114,156,180,181,582,	0,1221,2140,5451,7327,13317,15373,25494,26144,27011,29282,
#Partially deleted in new
chr5	1253166	1295047	chr5:1253166-1295047	3	-	1253727	1294989	0	16	665,138,125,62,127,189,72,114,86,96,156,180,181,196,1354,277,	0,1201,2120,5431,7307,11237,13297,15353,17952,19018,25474,26124,26991,29262,40146,41604,
#Partially deleted in new
chr5	1253727	1294989	chr5:1253727-1294989	1	-	1253727	1294989	0	15	104,138,125,62,127,72,114,86,96,156,180,181,196,1354,219,	0,640,1559,4870,6746,12736,14792,17391,18457,24913,25563,26430,28701,39585,41043,
#Partially deleted in new
chr5	1253727	1294989	chr5:1253727-1294989	0	-	1266511	1294989	0	13	104,138,125,62,127,72,114,120,180,181,196,1354,219,	0,640,1559,4870,6746,12736,14792,24913,25563,26430,28701,39585,41043,
#Deleted in new
chr5	1264247	1266524	chr5:1264247-1266524	0	-	1264247	1264247	8553170	2	345,61,	0,2216,
#Deleted in new
chr5	1294557	1295069	chr5:1294557-1295069	0	-	1294557	1294557	8553170	2	109,299,	0,213,
#Deleted in new
chr5	1309309	1309377	chr5:1309309-1309377	3	-	1309309	1309309	5263520	1	68,	0,
#Partially deleted in new
chr5	1317743	1345099	chr5:1317743-1345099	3	-	1318368	1344841	789624	17	710,116,45,56,35,83,51,66,104,85,95,118,79,146,190,101,420,	0,2872,3891,4020,5133,6043,7019,8007,12536,14055,16545,17313,20160,21116,23927,26607,26936,
#Partially deleted in new
chr5	1317752	1341738	chr5:1317752-1341738	1	-	1318368	1341724	789624	14	701,116,45,56,35,83,51,66,81,95,118,79,146,68,	0,2863,3882,4011,5124,6034,7010,7998,14050,16536,17304,20151,21107,23918,
#Deleted in new
chr5	1317867	1331844	chr5:1317867-1331844	0	-	1317867	1317867	8553170	8	586,116,45,56,35,83,1054,1565,	0,2748,3767,3896,5009,5919,6895,12412,
#Partially deleted in new
chr5	1317891	1344887	chr5:1317891-1344887	1	-	1318368	1341724	789624	16	562,116,45,56,35,83,51,66,81,95,118,79,146,190,101,208,	0,2724,3743,3872,4985,5895,6871,7859,13911,16397,17165,20012,20968,23779,26459,26788,
#Deleted in new
chr5	1318174	1325827	chr5:1318174-1325827	0	-	1318174	1318174	8553170	8	279,116,45,56,35,83,51,77,	0,2441,3460,3589,4702,5612,6588,7576,
#Deleted in new
chr5	1318298	1321829	chr5:1318298-1321829	0	-	1318298	1318298	8553170	4	155,116,45,66,	0,2317,3336,3465,
#Deleted in new
chr5	1318354	1326255	chr5:1318354-1326255	0	-	1318354	1318354	8553170	9	99,116,45,56,35,83,51,66,241,	0,2261,3280,3409,4522,5432,6408,7396,7660,
#Deleted in new
chr5	1320207	1323830	chr5:1320207-1323830	0	-	1320207	1320207	8553170	5	524,45,56,35,44,	0,1427,1556,2669,3579,
#Deleted in new
chr5	1320614	1322915	chr5:1320614-1322915	0	-	1320614	1320614	8553170	3	117,185,39,	0,1020,2262,
#Deleted in new
chr5	1320615	1326436	chr5:1320615-1326436	0	-	1320615	1320615	8553170	8	116,45,56,35,83,51,66,176,	0,1019,1148,2261,3171,4147,5135,5645,
#Deleted in new
chr5	1320683	1324037	chr5:1320683-1324037	0	-	1320683	1320683	8553170	4	48,185,35,251,	0,951,2193,3103,
#Deleted in new
chr5	1321646	1324857	chr5:1321646-1324857	0	-	1321646	1321646	8553170	4	173,35,83,95,	0,1230,2140,3116,
#Partially deleted in new
chr5	1322833	1335121	chr5:1322833-1335121	0	-	1322833	1322833	8553170	8	78,83,51,66,104,85,95,65,	0,953,1929,2917,7446,8965,11455,12223,
#Partially deleted in new
chr5	1323786	1335155	chr5:1323786-1335155	0	-	1323786	1323786	8553170	7	83,51,66,152,85,95,99,	0,976,1964,6493,8012,10502,11270,
#Deleted in new
chr5	1323832	1332338	chr5:1323832-1332338	0	-	1323832	1323832	8553170	6	37,51,66,104,85,224,	0,930,1918,6447,7966,8282,
#Partially deleted in new
chr5	1334357	1338318	chr5:1334357-1338318	0	-	1334357	1334357	8553170	3	26,118,415,	0,699,3546,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	1363581	1380067	chr5:1363581-1380067	3	-	1363581	1363581	789624	2	1110,506,	0,15980,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	1363625	1380048	chr5:1363625-1380048	0	-	1363625	1363625	8553170	2	1066,384,	0,16039,
#Partially deleted in new
chr5	1364113	1368395	chr5:1364113-1368395	0	-	1364113	1364113	8553170	2	578,76,	0,4206,
#Partially deleted in new
chr5	1370542	1370945	chr5:1370542-1370945	7	-	1370542	1370542	16724991	1	403,	0,
#Deleted in new
chr5	1383158	1386409	chr5:1383158-1386409	3	-	1383158	1383158	8553170	1	3251,	0,
#Partially deleted in new
chr5	1392789	1445430	chr5:1392789-1445430	3	-	1394734	1443197	789624	15	1969,72,168,101,100,129,113,125,104,135,139,235,132,331,83,	0,8125,10132,13398,16236,16931,18453,21901,23308,27779,29086,39674,48569,50122,52558,
#Partially deleted in new
chr5	1394028	1401307	chr5:1394028-1401307	0	-	1394028	1394028	8553170	3	730,72,148,	0,6886,7131,
#Deleted in new
chr5	1414740	1416578	chr5:1414740-1416578	0	-	1414740	1414740	8553170	2	75,481,	0,1357,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr5	1456479	1523962	chr5:1456479-1523962	0	-	1463650	1523844	789624	17	1612,256,208,1996,142,99,154,126,83,55,35,59,61,113,215,143,253,	0,3643,4710,5360,10269,14346,17477,18080,20924,23141,24462,26948,31911,33266,38220,44981,67230,
#Partially deleted in new
chr5	1461422	1523977	chr5:1461422-1523977	3	-	1463650	1523844	789624	14	2413,142,99,154,126,83,55,35,59,61,113,215,143,268,	0,5326,9403,12534,13137,15981,18198,19519,22005,26968,28323,33277,40038,62287,
#Deleted in new
chr5	1461428	1467325	chr5:1461428-1467325	0	-	1461428	1461428	8553170	3	2407,142,145,	0,5320,5752,
#Partially deleted in new
chr5	1479475	1494778	chr5:1479475-1494778	0	-	1479475	1479475	8553170	6	200,35,59,61,113,79,	0,1466,3952,8915,10270,15224,
#Partially deleted in new
chr5	1483427	1523740	chr5:1483427-1523740	0	-	1483427	1483427	8553170	7	59,61,113,215,143,134,31,	0,4963,6318,11272,18033,37919,40282,
#Partially deleted in new
chr5	1488376	1494928	chr5:1488376-1494928	0	-	1488376	1488376	8553170	3	75,113,229,	0,1369,6323,
#Deleted in new
chr5	1510761	1510856	chr5:1510761-1510856	3	-	1510761	1510761	5263520	1	95,	0,
#Partially deleted in new
chr5	1544106	1551710	chr5:1544106-1551710	3	-	1544106	1544106	8553170	4	110,207,168,207,	0,2652,4202,7397,
#Partially deleted in new
chr5	1572221	1593289	chr5:1572221-1593289	7	-	1572221	1572221	16724991	6	65,124,131,112,119,177,	0,1950,3957,4322,17025,20891,
#Partially deleted in new
chr5	1589027	1594620	chr5:1589027-1594620	5	-	1589027	1589027	16724991	3	338,172,226,	0,4085,5367,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	1594625	1611467	chr5:1594625-1611467	3	+	1594625	1594625	8553170	3	622,90,949,	0,15702,15893,
#Deleted in new
chr5	1598126	1598247	chr5:1598126-1598247	7	+	1598126	1598126	16724991	1	121,	0,
#Partially deleted in new
chr5	1598919	1633981	chr5:1598919-1633981	5	-	1598919	1598919	16724991	5	350,201,45,263,174,	0,707,3771,33724,34888,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	1598919	1634005	chr5:1598919-1634005	7	-	1598919	1598919	16724991	7	908,45,141,876,108,62,198,	0,3771,27866,29835,33724,33925,34888,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	1598919	1634004	chr5:1598919-1634004	5	-	1598919	1598919	16724991	8	350,201,45,141,876,158,263,197,	0,707,3771,27866,29835,31489,33724,34888,
#Partially deleted in new
chr5	1599120	1634002	chr5:1599120-1634002	4	-	1599120	1599120	16724991	4	707,45,62,195,	0,3570,33724,34687,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	1601915	1633947	chr5:1601915-1633947	4	-	1601915	1601915	16724991	4	820,108,62,140,	0,30728,30929,31892,
#Partially deleted in new
chr5	1602690	1633906	chr5:1602690-1633906	5	-	1602690	1602690	16724991	3	45,62,99,	0,30154,31117,
#Deleted in new
chr5	1614835	1616334	chr5:1614835-1616334	7	+	1614835	1614835	16724991	3	119,633,323,	0,286,1176,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	1629000	1633984	chr5:1629000-1633984	4	-	1629000	1629000	16724991	5	630,158,108,62,177,	0,1408,3643,3844,4807,
#Deleted in new
chr5	1708784	1708868	chr5:1708784-1708868	3	-	1708784	1708784	5263520	1	84,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	1725148	1728172	chr5:1725148-1728172	3	+	1725148	1725148	8553170	1	3024,	0,
#Deleted in new
chr5	1798385	1799839	chr5:1798385-1799839	1	-	1798623	1798935	0	2	562,48,	0,1406,
#Deleted in new
chr5	1798385	1801366	chr5:1798385-1801366	3	-	1798623	1798935	0	2	562,33,	0,2948,
#Deleted in new
chr5	1798386	1799895	chr5:1798386-1799895	1	-	1798623	1798935	0	2	561,125,	0,1384,
#Deleted in new
chr5	1798389	1799838	chr5:1798389-1799838	1	-	1798623	1798935	0	2	558,29,	0,1420,
#Deleted in new
chr5	1798828	1799750	chr5:1798828-1799750	0	-	1798828	1798935	789624	2	119,674,	0,248,
#Partially deleted in new
chr5	1801399	1816605	chr5:1801399-1816605	3	+	1801417	1815916	0	4	150,54,123,755,	0,921,12939,14451,
#Partially deleted in new
chr5	1801414	1814699	chr5:1801414-1814699	1	+	1801417	1814671	789624	3	135,54,361,	0,906,12924,
#Deleted in new
chr5	1801420	1802279	chr5:1801420-1802279	0	+	1801420	1801420	8553170	2	129,131,	0,728,
#Deleted in new
chr5	1850949	1851497	chr5:1850949-1851497	3	+	1850949	1850949	8553170	2	114,314,	0,234,
#Deleted in new
chr5	1855969	1856568	chr5:1855969-1856568	3	-	1855969	1855969	789624	2	327,166,	0,433,
#Deleted in new
chr5	1858408	1859890	chr5:1858408-1859890	3	-	1858408	1858408	8553170	1	1482,	0,
#Partially deleted in new
chr5	1877412	1887236	chr5:1877412-1887236	3	-	1877968	1882647	789624	6	1380,329,110,252,145,175,	0,2091,3312,4395,5190,9649,
#Partially deleted in new
chr5	1877426	1882766	chr5:1877426-1882766	1	-	1877968	1882647	789624	5	1366,329,110,252,164,	0,2077,3298,4381,5176,
#Partially deleted in new
chr5	1877426	1886984	chr5:1877426-1886984	1	-	1877968	1882647	789624	7	1366,329,78,110,252,145,123,	0,2077,2639,3298,4381,5176,9435,
#Partially deleted in new
chr5	1877426	1887179	chr5:1877426-1887179	1	-	1877968	1882647	789624	7	1366,329,78,110,252,145,118,	0,2077,2639,3298,4381,5176,9635,
#Partially deleted in new
chr5	1877447	1887218	chr5:1877447-1887218	1	-	1877968	1882647	789624	6	1345,329,110,252,145,357,	0,2056,3277,4360,5155,9414,
#Partially deleted in new
chr5	1877813	1882752	chr5:1877813-1882752	0	-	1879686	1882647	789624	5	979,367,110,252,150,	0,1690,2911,3994,4789,
#Partially deleted in new
chr5	1878784	1881093	chr5:1878784-1881093	0	-	1878784	1878784	8553170	4	8,329,110,89,	0,719,1940,2220,
#Deleted in new
chr5	1879669	1882744	chr5:1879669-1882744	0	-	1879669	1882647	789624	5	163,78,110,252,142,	0,396,1055,2138,2933,
#Deleted in new
chr5	1883965	1884649	chr5:1883965-1884649	3	+	1883965	1883965	8553170	2	255,170,	0,514,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	1887331	1900493	chr5:1887331-1900493	3	+	1887331	1887331	789624	4	38,70,75,1452,	0,881,10713,11710,
#Partially deleted in new
chr5	1933862	1959176	chr5:1933862-1959176	3	+	1933862	1933862	8553170	2	123,595,	0,24719,
#Partially deleted in new
chr5	1939771	1958901	chr5:1939771-1958901	0	+	1939771	1939771	8553170	2	170,320,	0,18810,
#Partially deleted in new
chr5	1963608	1967154	chr5:1963608-1967154	3	-	1963608	1963608	8553170	3	248,164,78,	0,3191,3468,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	1968093	1969013	chr5:1968093-1969013	3	+	1968093	1968093	8553170	2	136,424,	0,496,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	2184709	2184820	chr5:2184709-2184820	3	+	2184709	2184709	8553170	1	111,	0,
#Deleted in new
chr5	2261858	2262023	chr5:2261858-2262023	7	+	2261858	2261858	16724991	1	165,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	2712590	2715237	chr5:2712590-2715237	3	+	2712590	2712590	789624	1	2647,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	2736661	2737759	chr5:2736661-2737759	3	-	2736661	2736661	8553170	2	660,28,	0,1070,
#Deleted in new
chr5	2745844	2751662	chr5:2745844-2751662	3	-	2747563	2751413	789624	5	942,76,708,406,498,	0,1696,2500,3537,5320,
#Deleted in new
chr5	2746765	2751655	chr5:2746765-2751655	1	-	2747563	2751413	789624	4	851,708,406,491,	0,1579,2616,4399,
#Deleted in new
chr5	2752130	2755081	chr5:2752130-2755081	0	+	2752130	2752130	8553170	2	334,53,	0,2898,
#Deleted in new
chr5	2752147	2755397	chr5:2752147-2755397	3	+	2752264	2755041	789624	4	317,133,71,369,	0,474,1137,2881,
#Deleted in new
chr5	2752147	2755397	chr5:2752147-2755397	0	+	2752147	2752147	789624	4	317,133,71,369,	0,474,1137,2881,
#Deleted in new
chr5	2752227	2755081	chr5:2752227-2755081	0	+	2752227	2752227	8553170	4	237,75,86,53,	0,452,1057,2801,
#Deleted in new
chr5	2752227	2755081	chr5:2752227-2755081	0	+	2752227	2752227	8553170	4	237,75,71,53,	0,452,1057,2801,
#Deleted in new
chr5	2752227	2755081	chr5:2752227-2755081	0	+	2752227	2752227	8553170	4	237,133,86,53,	0,394,1057,2801,
#Deleted in new
chr5	2752245	2754373	chr5:2752245-2754373	0	+	2752245	2752245	8553170	3	219,133,1089,	0,376,1039,
#Deleted in new
chr5	2752264	2755376	chr5:2752264-2755376	0	+	2752264	2752264	8553170	3	200,133,348,	0,357,2764,
#Deleted in new
chr5	2752264	2755041	chr5:2752264-2755041	1	+	2752264	2755041	789624	2	200,13,	0,2764,
#Deleted in new
chr5	2752264	2753359	chr5:2752264-2753359	1	+	2752264	2753359	789624	3	200,133,75,	0,357,1020,
#Deleted in new
chr5	2787450	2788549	chr5:2787450-2788549	7	-	2787450	2787450	16724991	1	1099,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	2831020	2835139	chr5:2831020-2835139	3	-	2831020	2831020	8553170	2	39,521,	0,3598,
#Deleted in new
chr5	2965005	2967628	chr5:2965005-2967628	3	+	2965005	2965005	8553170	2	307,246,	0,2377,
#Deleted in new
chr5	3177834	3181232	chr5:3177834-3181232	3	+	3177834	3177834	789624	2	345,304,	0,3094,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	3417151	3536094	chr5:3417151-3536094	3	-	3417151	3417151	789624	5	2165,234,341,126,333,	0,3919,5130,114601,118610,
#Partially deleted in new
chr5	3452815	3461660	chr5:3452815-3461660	3	+	3452815	3452815	789624	3	147,83,344,	0,889,8501,
#Deleted in new
chr5	3596053	3601403	chr5:3596053-3601403	3	+	3596105	3601040	789624	4	328,1036,73,421,	0,3171,4555,4929,
#Deleted in new
chr5	3596210	3600188	chr5:3596210-3600188	3	-	3596210	3596210	8553170	2	58,325,	0,3653,
#Deleted in new
chr5	4012707	4013649	chr5:4012707-4013649	3	-	4012707	4012707	8553170	2	284,275,	0,667,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	4033712	4041764	chr5:4033712-4041764	3	-	4033712	4033712	8553170	3	407,247,32,	0,3522,8020,
#Partially deleted in new
chr5	4135681	4143648	chr5:4135681-4143648	3	+	4135681	4135681	8553170	2	164,402,	0,7565,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	4436849	4440259	chr5:4436849-4440259	3	-	4436849	4436849	8553170	2	1158,2142,	0,1268,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	4451929	4866221	chr5:4451929-4866221	3	-	4451929	4451929	8553170	6	125,64,103,94,129,206,	0,29762,70335,332941,353790,414086,
#Deleted in new
chr5	4512261	4516776	chr5:4512261-4516776	3	+	4512261	4512261	8553170	2	222,1454,	0,3061,
#Partially deleted in new
chr5	4640730	4648254	chr5:4640730-4648254	3	+	4640730	4640730	8553170	2	355,185,	0,7339,
#Deleted in new
chr5	4773480	4774865	chr5:4773480-4774865	3	+	4773480	4773480	789624	2	172,629,	0,756,
#Partially deleted in new
chr5	4775475	4805769	chr5:4775475-4805769	3	-	4775475	4775475	8553170	2	406,50,	0,30244,
#Partially deleted in new
chr5	4831698	4849800	chr5:4831698-4849800	3	-	4831698	4831698	8553170	2	233,62,	0,18040,
#Partially deleted in new
chr5	4866520	4874759	chr5:4866520-4874759	3	+	4866520	4866520	8553170	3	67,120,284,	0,7703,7955,
#Deleted in new
chr5	4967763	4970425	chr5:4967763-4970425	3	-	4967763	4967763	8553170	3	240,108,96,	0,1039,2566,
#Partially deleted in new
chr5	4974689	5034267	chr5:4974689-5034267	3	-	4974689	4974689	8553170	4	78,250,93,135,	0,321,46939,59443,
#Partially deleted in new
chr5	5034358	5070004	chr5:5034358-5070004	3	+	5034358	5034358	789624	8	179,129,49,267,118,202,204,652,	0,4311,16849,23203,25205,32544,33464,34994,
#Partially deleted in new
chr5	5034462	5059681	chr5:5034462-5059681	0	+	5034462	5034462	8553170	4	75,129,267,118,	0,4207,23099,25101,
#Partially deleted in new
chr5	5038685	5057873	chr5:5038685-5057873	0	+	5038685	5038685	8553170	2	113,312,	0,18876,
#Partially deleted in new
chr5	5046795	5049497	chr5:5046795-5049497	3	-	5046795	5046795	8553170	2	419,126,	0,2576,
#Deleted in new
chr5	5046979	5047454	chr5:5046979-5047454	0	-	5046979	5046979	8553170	2	235,97,	0,378,
#Partially deleted in new
chr5	5057730	5067329	chr5:5057730-5067329	0	+	5057730	5057730	8553170	3	98,118,427,	0,1833,9172,
#Partially deleted in new
chr5	5069191	5078311	chr5:5069191-5078311	3	-	5069191	5069191	789624	2	324,108,	0,9012,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	5126045	5126337	chr5:5126045-5126337	3	+	5126045	5126045	8553170	1	292,	0,
#Partially deleted in new
chr5	5132779	5140054	chr5:5132779-5140054	3	-	5132779	5132779	789624	4	453,134,203,99,	0,857,1088,7176,
#Partially deleted in new
chr5	5140329	5320304	chr5:5140329-5320304	3	+	5140467	5319138	789624	23	210,103,326,262,200,84,160,106,138,154,96,149,173,131,124,245,139,127,202,195,225,148,1282,	0,334,5800,41714,45722,47395,49641,51355,59802,68763,82459,92038,94684,96639,98821,99351,101723,122327,162938,163242,166174,177804,178693,
#Partially deleted in new
chr5	5140329	5223727	chr5:5140329-5223727	1	+	5140467	5222896	789624	11	210,103,326,262,200,84,160,106,138,154,939,	0,334,5800,41714,45722,47395,49641,51355,59802,68763,82459,
#Partially deleted in new
chr5	5140467	5303807	chr5:5140467-5303807	0	+	5140467	5140467	8553170	20	72,103,326,262,200,84,160,106,138,154,96,149,173,131,124,245,139,127,202,236,	0,196,5662,41576,45584,47257,49503,51217,59664,68625,82321,91900,94546,96501,98683,99213,101585,122189,162800,163104,
#Partially deleted in new
chr5	5142137	5176214	chr5:5142137-5176214	3	-	5142137	5142137	8553170	2	234,220,	0,33857,
#Deleted in new
chr5	5235036	5239187	chr5:5235036-5239187	0	+	5235036	5235036	8553170	2	150,37,	0,4114,
#Deleted in new
chr5	5375722	5376836	chr5:5375722-5376836	7	-	5375722	5375722	16724991	1	1114,	0,
#Deleted in new
chr5	5395377	5395957	chr5:5395377-5395957	7	-	5395377	5395377	16724991	1	580,	0,
#Deleted in new
chr5	5395971	5396335	chr5:5395971-5396335	7	-	5395971	5395971	16724991	1	364,	0,
#Deleted in new
chr5	5396476	5396968	chr5:5396476-5396968	7	-	5396476	5396476	16724991	1	492,	0,
#Partially deleted in new
chr5	5420663	5454615	chr5:5420663-5454615	0	+	5441145	5454615	789624	11	29,59,35,19,112,77,38,83,40,57,64,	0,15754,16416,19231,20448,22504,23625,26763,27057,27177,33888,
#Partially deleted in new
chr5	5422693	5490234	chr5:5422693-5490234	3	+	5422915	5489330	789624	19	306,59,35,19,112,77,38,83,40,57,87,410,4791,169,161,191,107,99,1086,	0,13724,14386,17201,18418,20474,21595,24733,25027,25147,31858,34638,37742,43640,46134,50864,53279,64027,66455,
#Partially deleted in new
chr5	5422741	5437836	chr5:5422741-5437836	0	+	5422741	5422741	8553170	3	258,59,757,	0,13676,14338,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	6019028	6022283	chr5:6019028-6022283	3	-	6019028	6019028	8553170	1	3255,	0,
#Deleted in new
chr5	6030034	6030841	chr5:6030034-6030841	3	+	6030034	6030034	8553170	2	238,204,	0,603,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	6134302	6137171	chr5:6134302-6137171	3	+	6134302	6134302	8553170	1	2869,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	6289856	6290624	chr5:6289856-6290624	7	+	6289856	6289856	16724991	2	226,174,	0,594,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	6310440	6337292	chr5:6310440-6337292	3	-	6310440	6310440	789624	2	2276,143,	0,26709,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	6337238	6339884	chr5:6337238-6339884	0	-	6337238	6337238	8553170	2	85,473,	0,2173,
#Deleted in new
chr5	6371880	6378594	chr5:6371880-6378594	3	-	6372502	6378483	789624	4	721,103,84,233,	0,2443,5285,6481,
#Deleted in new
chr5	6372164	6374811	chr5:6372164-6374811	0	-	6372164	6372164	8553170	2	437,488,	0,2159,
#Deleted in new
chr5	6376811	6378571	chr5:6376811-6378571	0	-	6376811	6376811	8553170	2	438,210,	0,1550,
#Partially deleted in new
chr5	6448622	6494909	chr5:6448622-6494909	3	+	6448893	6491349	789624	2	625,3692,	0,42595,
#Deleted in new
chr5	6532890	6533200	chr5:6532890-6533200	7	-	6532890	6532890	16724991	1	310,	0,
#Deleted in new
chr5	6582135	6583723	chr5:6582135-6583723	0	+	6582135	6582135	8553170	2	466,121,	0,1467,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	6582137	6588499	chr5:6582137-6588499	3	+	6582137	6582137	789624	5	129,182,199,254,2272,	0,282,1465,3636,4090,
#Partially deleted in new
chr5	6582145	6585898	chr5:6582145-6585898	0	+	6582145	6582145	8553170	2	456,125,	0,3628,
#Partially deleted in new
chr5	6583275	6587670	chr5:6583275-6587670	0	+	6583275	6583275	789624	3	526,254,1443,	0,2498,2952,
#Partially deleted in new
chr5	6599238	6633291	chr5:6599238-6633291	3	-	6599925	6632979	789624	19	994,40,139,81,136,93,185,97,131,74,131,75,193,85,72,106,105,158,408,	0,3222,4899,5366,6034,7581,7961,10587,11716,12486,17488,18711,20867,22777,23975,26325,32634,33360,33645,
#Partially deleted in new
chr5	6599239	6633291	chr5:6599239-6633291	0	-	6620226	6632979	789624	18	993,40,139,81,136,93,185,97,131,74,131,75,193,72,106,105,158,408,	0,3221,4898,5365,6033,7580,7960,10586,11715,12485,17487,18710,20866,23974,26324,32633,33359,33644,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	6599240	6621489	chr5:6599240-6621489	0	-	6599240	6599240	8553170	13	992,40,139,81,136,93,185,97,131,74,131,75,1384,	0,3220,4897,5364,6032,7579,7959,10585,11714,12484,17486,18709,20865,
#Partially deleted in new
chr5	6599399	6604882	chr5:6599399-6604882	0	-	6599399	6599399	8553170	4	833,40,139,278,	0,3061,4738,5205,
#Partially deleted in new
chr5	6599568	6633042	chr5:6599568-6633042	1	-	6599925	6632979	789624	18	664,40,139,81,136,93,185,97,131,74,131,75,193,85,72,106,158,159,	0,2892,4569,5036,5704,7251,7631,10257,11386,12156,17158,18381,20537,22447,23645,25995,33030,33315,
#Partially deleted in new
chr5	6600029	6607257	chr5:6600029-6607257	0	-	6604200	6607257	789624	6	203,40,139,81,93,58,	0,2431,4108,4575,6790,7170,
#Deleted in new
chr5	6603868	6604708	chr5:6603868-6604708	0	-	6603868	6603868	8553170	2	408,104,	0,736,
#Partially deleted in new
chr5	6604800	6606926	chr5:6604800-6606926	0	-	6604800	6604800	8553170	2	608,107,	0,2019,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	6633342	6674386	chr5:6633342-6674386	3	+	6633576	6668268	789624	5	527,167,102,151,6185,	0,18499,22735,29473,34859,
#Partially deleted in new
chr5	6633426	6668849	chr5:6633426-6668849	0	+	6633576	6644895	789624	6	443,502,167,102,151,648,	0,11381,18415,22651,29389,34775,
#Partially deleted in new
chr5	6633426	6668972	chr5:6633426-6668972	0	+	6633576	6662828	789624	4	443,102,151,771,	0,22651,29389,34775,
#Partially deleted in new
chr5	6633455	6653527	chr5:6633455-6653527	0	+	6633455	6633455	8553170	3	414,167,81,	0,18386,19991,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	6686324	6707711	chr5:6686324-6707711	3	-	6686324	6686324	789624	3	608,152,2604,	0,16233,18783,
#Deleted in new
chr5	6705149	6706272	chr5:6705149-6706272	0	-	6705149	6705149	8553170	2	136,245,	0,878,
#Partially deleted in new
chr5	6713006	6757048	chr5:6713006-6757048	1	+	6713983	6754945	789624	13	1693,124,47,121,108,129,214,127,101,173,159,165,2298,	0,24503,25676,26725,29483,30705,33207,35457,36550,37324,38032,39866,41744,
#Partially deleted in new
chr5	6714631	6737624	chr5:6714631-6737624	0	+	6737543	6737624	789624	2	488,115,	0,22878,
#Partially deleted in new
chr5	6714788	6755030	chr5:6714788-6755030	3	+	6737543	6754945	789624	13	154,124,47,121,108,129,214,127,101,173,159,165,280,	0,22721,23894,24943,27701,28923,31425,33675,34768,35542,36250,38084,39962,
#Deleted in new
chr5	6745914	6749657	chr5:6745914-6749657	0	+	6745914	6745914	8553170	3	513,127,101,	0,2549,3642,
#Partially deleted in new
chr5	6745987	6755486	chr5:6745987-6755486	0	+	6745987	6745987	8553170	7	440,127,101,173,159,165,736,	0,2476,3569,4343,5051,6885,8763,
#Partially deleted in new
chr5	6749554	6750816	chr5:6749554-6750816	0	+	6749554	6749554	8553170	2	103,486,	0,776,
#Deleted in new
chr5	6750379	6751489	chr5:6750379-6751489	0	+	6750379	6750379	8553170	2	124,451,	0,659,
#Partially deleted in new
chr5	6765893	6776669	chr5:6765893-6776669	1	+	6765893	6765893	8553170	2	88,1111,	0,9665,
#Partially deleted in new
chr5	6775817	6833120	chr5:6775817-6833120	3	+	6775817	6775817	8553170	7	212,109,176,209,59,77,130,	0,1232,1516,50825,55738,56404,57173,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	6779457	6779998	chr5:6779457-6779998	3	+	6779457	6779457	8553170	1	541,	0,
#Partially deleted in new
chr5	6795879	6826728	chr5:6795879-6826728	0	+	6795879	6795879	8553170	2	466,86,	0,30763,
#Deleted in new
chr5	6827852	6827921	chr5:6827852-6827921	3	-	6827852	6827852	5263520	1	69,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	6839459	7180267	chr5:6839459-7180267	3	+	6839459	6839459	8553170	6	172,190,85,47,225,1276,	0,84279,197021,309308,311344,339532,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	6848126	6848462	chr5:6848126-6848462	3	-	6848126	6848126	8553170	1	336,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	6933669	7214054	chr5:6933669-7214054	1	+	6933669	6933669	8553170	7	69,85,47,225,111,165,122,	0,102811,215098,217134,245322,257112,280263,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	7047226	7047336	chr5:7047226-7047336	7	+	7047226	7047226	16724991	1	110,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	7239780	7240018	chr5:7239780-7240018	3	+	7239780	7239780	8553170	1	238,	0,
#Partially deleted in new
chr5	7272791	7276923	chr5:7272791-7276923	3	+	7272791	7272791	8553170	3	129,140,267,	0,3048,3865,
#Partially deleted in new
chr5	7287923	7288477	chr5:7287923-7288477	7	-	7287923	7287923	16724991	2	36,210,	0,344,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	7289890	7326603	chr5:7289890-7326603	7	+	7289890	7289890	16724991	4	84,103,135,538,	0,901,6324,36175,
#Partially deleted in new
chr5	7290822	7296345	chr5:7290822-7296345	5	+	7290822	7290822	16724991	2	72,131,	0,5392,
#Partially deleted in new
chr5	7299773	7306592	chr5:7299773-7306592	7	-	7299773	7299773	16724991	8	1686,142,59,283,51,30,130,84,	0,1979,2450,3767,4138,4458,5300,6735,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	7326063	7326609	chr5:7326063-7326609	5	+	7326063	7326063	16724991	2	126,206,	0,340,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	7344578	7345921	chr5:7344578-7345921	3	+	7344578	7344578	8553170	2	275,289,	0,1054,
#Deleted in new
chr5	7346985	7347977	chr5:7346985-7347977	3	-	7346985	7346985	789624	2	783,102,	0,890,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	7362978	7364531	chr5:7362978-7364531	3	-	7362978	7362978	8553170	3	137,82,188,	0,524,1365,
#Partially deleted in new
chr5	7367928	7373074	chr5:7367928-7373074	3	-	7367928	7367928	8553170	3	68,73,202,	0,1504,4944,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	7373116	7379790	chr5:7373116-7379790	3	+	7373116	7373116	8553170	2	399,178,	0,6496,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr5	7396207	7830081	chr5:7396207-7830081	3	+	7396296	7826871	789624	25	299,198,162,150,149,112,128,159,133,177,44,81,70,98,85,138,120,170,85,159,147,108,115,125,3363,	0,18365,124530,229959,294483,299544,302039,310536,311498,313003,316648,320949,328337,330956,347460,361241,370479,376724,388157,393434,406010,408377,420658,424357,430511,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	7414628	7522622	chr5:7414628-7522622	0	+	7414628	7414628	8553170	3	142,162,267,	0,106109,107727,
#Partially deleted in new
chr5	7414663	7658206	chr5:7414663-7658206	0	+	7414663	7414663	8553170	4	107,162,150,181,	0,106074,211503,243362,
#Partially deleted in new
chr5	7611108	7695816	chr5:7611108-7695816	0	+	7626229	7695816	789624	4	67,150,149,65,	0,15058,79582,84643,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	7685090	7692271	chr5:7685090-7692271	0	+	7685090	7685090	8553170	2	189,1714,	0,5467,
#Partially deleted in new
chr5	7707801	7749766	chr5:7707801-7749766	3	-	7707801	7707801	8553170	3	360,136,26,	0,38403,41939,
#Partially deleted in new
chr5	7773067	7820689	chr5:7773067-7820689	0	+	7773067	7789769	789624	7	34,85,142,147,108,115,125,	0,11297,16591,29150,31517,43798,47497,
#Partially deleted in new
chr5	7782172	7816874	chr5:7782172-7816874	0	+	7782172	7782172	8553170	6	95,85,159,147,108,9,	0,2192,7469,20045,22412,34693,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	7793618	7827532	chr5:7793618-7827532	0	+	7793618	7793618	8553170	5	8746,108,115,125,814,	0,10966,23247,26946,33100,
#Partially deleted in new
chr5	7830377	7851490	chr5:7830377-7851490	3	-	7831849	7851021	789624	3	1652,117,616,	0,5004,20497,
#Partially deleted in new
chr5	7831397	7851151	chr5:7831397-7851151	1	-	7831849	7851021	789624	3	626,117,277,	0,3984,19477,
#Partially deleted in new
chr5	7851185	7862018	chr5:7851185-7862018	0	+	7851185	7851185	8553170	3	400,106,68,	0,5601,10765,
#Partially deleted in new
chr5	7851194	7878038	chr5:7851194-7878038	0	+	7851194	7851194	8553170	4	391,107,118,95,	0,10756,24063,26749,
#Partially deleted in new
chr5	7851199	7861682	chr5:7851199-7861682	0	+	7851199	7851199	8553170	3	386,106,198,	0,5587,10285,
#Partially deleted in new
chr5	7859158	7869002	chr5:7859158-7869002	3	-	7859434	7868083	789624	7	381,115,70,175,86,1551,24,	0,1990,2424,3664,6739,7487,9820,
#Partially deleted in new
chr5	7859335	7869026	chr5:7859335-7869026	0	-	7859335	7859335	789624	6	204,115,191,175,86,48,	0,1813,2247,3487,6562,9643,
#Partially deleted in new
chr5	7859380	7869010	chr5:7859380-7869010	0	-	7859380	7859380	789624	6	159,115,70,175,86,32,	0,1768,2202,3442,6517,9598,
#Partially deleted in new
chr5	7859396	7868170	chr5:7859396-7868170	0	-	7867346	7868083	789624	7	143,115,70,175,86,744,218,	0,1752,2186,3426,6501,7249,8556,
#Partially deleted in new
chr5	7859402	7868170	chr5:7859402-7868170	0	-	7861645	7868083	789624	6	137,115,191,175,86,1525,	0,1746,2180,3420,6495,7243,
#Partially deleted in new
chr5	7861608	7863296	chr5:7861608-7863296	0	-	7861608	7861608	8553170	2	44,474,	0,1214,
#Deleted in new
chr5	7867349	7869037	chr5:7867349-7869037	0	-	7867349	7868083	789624	2	758,59,	0,1629,
#Deleted in new
chr5	7867489	7869032	chr5:7867489-7869032	0	-	7867489	7868032	789624	2	543,54,	0,1489,
#Partially deleted in new
chr5	7869103	7901124	chr5:7869103-7901124	3	+	7869133	7900058	0	15	86,154,154,118,379,123,154,89,181,43,187,119,93,183,1211,	0,1666,4269,6154,8840,14051,16597,17511,19991,22268,23623,26630,27760,27961,30810,
#Partially deleted in new
chr5	7869103	7900279	chr5:7869103-7900279	0	+	7870794	7875267	789624	15	112,154,140,118,379,123,154,89,181,43,187,119,93,183,366,	0,1666,4269,6154,8840,14051,16597,17511,19991,22268,23623,26630,27760,27961,30810,
#Partially deleted in new
chr5	7869147	7878024	chr5:7869147-7878024	0	+	7869147	7875267	789624	5	42,154,140,118,81,	0,1622,4225,6110,8796,
#Partially deleted in new
chr5	7869147	7878149	chr5:7869147-7878149	0	+	7870794	7875305	0	4	68,154,118,206,	0,1622,6110,8796,
#Partially deleted in new
chr5	7869147	7901124	chr5:7869147-7901124	0	+	7869147	7875305	789624	14	42,154,118,379,123,154,89,181,43,187,119,93,183,1211,	0,1622,6110,8796,14007,16553,17467,19947,22224,23579,26586,27716,27917,30766,
#Partially deleted in new
chr5	7869147	7878235	chr5:7869147-7878235	0	+	7869147	7878235	789624	3	68,118,292,	0,6110,8796,
#Partially deleted in new
chr5	7869183	7877965	chr5:7869183-7877965	0	+	7870794	7872241	789624	6	32,154,76,154,118,22,	0,1586,3046,4189,6074,8760,
#Partially deleted in new
chr5	7869188	7901124	chr5:7869188-7901124	1	+	7870794	7900058	0	15	27,154,154,118,379,123,154,89,181,43,187,119,93,183,1211,	0,1581,4184,6069,8755,13966,16512,17426,19906,22183,23538,26545,27675,27876,30725,
#Partially deleted in new
chr5	7869193	7883265	chr5:7869193-7883265	0	+	7870794	7875305	0	5	22,154,118,374,111,	0,1576,6064,8755,13961,
#Partially deleted in new
chr5	7869226	7878012	chr5:7869226-7878012	0	+	7870794	7878012	789624	5	72,154,154,118,69,	0,1543,4146,6031,8717,
#Deleted in new
chr5	7869238	7870917	chr5:7869238-7870917	0	+	7870794	7870917	789624	2	480,148,	0,1531,
#Partially deleted in new
chr5	7870260	7875310	chr5:7870260-7875310	0	+	7870794	7875310	789624	4	159,154,154,53,	0,509,3112,4997,
#Partially deleted in new
chr5	7870769	7901116	chr5:7870769-7901116	0	+	7870769	7889129	789624	13	154,154,118,379,123,154,181,43,187,119,93,183,1203,	0,2603,4488,7174,12385,14931,18325,20602,21957,24964,26094,26295,29144,
#Deleted in new
chr5	7875161	7878075	chr5:7875161-7878075	0	+	7875161	7875161	8553170	2	214,132,	0,2782,
#Deleted in new
chr5	7885115	7891388	chr5:7885115-7891388	0	+	7885115	7885115	8553170	5	143,154,89,181,17,	0,585,1499,3979,6256,
#Deleted in new
chr5	7885784	7890412	chr5:7885784-7890412	0	+	7885784	7885784	8553170	4	70,89,181,152,	0,830,3310,4476,
#Partially deleted in new
chr5	7886578	7892763	chr5:7886578-7892763	0	+	7886578	7886578	8553170	4	125,181,43,37,	0,2516,4793,6148,
#Partially deleted in new
chr5	7890345	7893650	chr5:7890345-7893650	0	+	7890345	7890345	8553170	4	67,43,187,144,	0,1026,2381,3161,
#Partially deleted in new
chr5	7891368	7893175	chr5:7891368-7893175	0	+	7891368	7891368	8553170	2	46,449,	0,1358,
#Deleted in new
chr5	7896436	7897100	chr5:7896436-7897100	0	+	7896436	7896436	8553170	2	520,36,	0,628,
#Deleted in new
chr5	7899914	7901119	chr5:7899914-7901119	0	+	7899914	7899914	8553170	2	543,77,	0,1128,
#Deleted in new
chr5	7924291	7925398	chr5:7924291-7925398	3	+	7924291	7924291	8553170	3	87,44,164,	0,662,943,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	7980145	7980304	chr5:7980145-7980304	3	+	7980145	7980145	8553170	1	159,	0,
#Deleted in new
chr5	8080185	8080761	chr5:8080185-8080761	3	-	8080185	8080185	8553170	1	576,	0,
#Deleted in new
chr5	8143617	8143784	chr5:8143617-8143784	3	+	8143617	8143617	8553170	1	167,	0,
#Deleted in new
chr5	8157540	8157788	chr5:8157540-8157788	7	-	8157540	8157540	16724991	1	248,	0,
#Partially deleted in new
chr5	8333480	8457558	chr5:8333480-8457558	3	-	8333480	8333480	789624	6	972,149,115,183,58,110,	0,1097,3700,54046,118742,123968,
#Partially deleted in new
chr5	8387637	8457564	chr5:8387637-8457564	3	-	8387637	8387637	8553170	5	72,76,118,58,116,	0,45435,46217,64585,69811,
#Deleted in new
chr5	8410788	8410996	chr5:8410788-8410996	7	-	8410788	8410788	16724991	1	208,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	8450742	8460087	chr5:8450742-8460087	3	+	8450742	8450742	8553170	2	902,155,	0,9190,
#Deleted in new
chr5	8455945	8456558	chr5:8455945-8456558	7	-	8455945	8455945	16724991	1	613,	0,
#Deleted in new
chr5	8457492	8460663	chr5:8457492-8460663	0	+	8457492	8457492	8553170	2	274,731,	0,2440,
#Deleted in new
chr5	8457690	8463095	chr5:8457690-8463095	1	+	8457690	8457690	789624	2	76,3163,	0,2242,
#Deleted in new
chr5	8458841	8459183	chr5:8458841-8459183	3	+	8458841	8458841	8553170	1	342,	0,
#Deleted in new
chr5	8460924	8460999	chr5:8460924-8460999	3	+	8460924	8460924	5263520	1	75,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	8525178	8528679	chr5:8525178-8528679	3	+	8525178	8525178	8553170	2	166,169,	0,3332,
#Deleted in new
chr5	8572046	8572206	chr5:8572046-8572206	3	+	8572046	8572046	8553170	1	160,	0,
#Partially deleted in new
chr5	8614355	8614696	chr5:8614355-8614696	3	+	8614355	8614355	8553170	1	341,	0,
#Partially deleted in new
chr5	8618580	8619104	chr5:8618580-8619104	7	-	8618580	8618580	16724991	1	524,	0,
#Partially deleted in new
chr5	8619177	8620310	chr5:8619177-8620310	7	+	8619177	8619177	16724991	1	1133,	0,
#Partially deleted in new
chr5	8659763	8660059	chr5:8659763-8660059	3	-	8659763	8659763	8553170	1	296,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	8669017	8669250	chr5:8669017-8669250	3	-	8669017	8669017	8553170	1	233,	0,
#Partially deleted in new
chr5	8685580	8685816	chr5:8685580-8685816	3	-	8685580	8685580	8553170	1	236,	0,
#Deleted in new
chr5	8717683	8717883	chr5:8717683-8717883	3	-	8717683	8717683	8553170	1	200,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	8754868	8755159	chr5:8754868-8755159	3	+	8754868	8754868	8553170	1	291,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	8785041	8785468	chr5:8785041-8785468	3	-	8785041	8785041	8553170	1	427,	0,
#Deleted in new
chr5	8793874	8794197	chr5:8793874-8794197	3	+	8793874	8793874	8553170	1	323,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	8839731	8881240	chr5:8839731-8881240	1	+	8839731	8839731	789624	3	227,164,105,	0,41156,41404,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	8839758	8842460	chr5:8839758-8842460	1	+	8839758	8839758	8553170	1	2702,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	8839764	8881525	chr5:8839764-8881525	3	+	8839764	8839764	8553170	4	194,52,124,638,	0,29202,33971,41123,
#Deleted in new
chr5	8980403	8980659	chr5:8980403-8980659	3	-	8980403	8980403	8553170	1	256,	0,
#Duplicated in new
chr5	9001773	9045940	chr5:9001773-9045940	3	+	9001773	9001773	8553170	6	121,223,108,105,112,136,	0,38371,39723,40287,41392,44031,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr5	9035025	9546075	chr5:9035025-9546075	3	-	9042896	9379946	789624	23	7991,212,48,156,171,219,226,148,144,182,118,208,205,136,286,214,99,63,46,100,201,97,492,	0,9347,15384,16847,19061,27861,31395,73114,83972,87630,101478,119462,155241,162142,166929,189648,191843,202802,283346,302687,344797,402730,510558,
#Deleted in new
chr5	9053815	9053895	chr5:9053815-9053895	3	-	9053815	9053815	5263520	1	80,	0,
#Partially deleted in new
chr5	9202123	9380201	chr5:9202123-9380201	0	-	9202123	9379946	789624	8	117,214,99,63,46,100,201,95,	0,22550,24745,35704,116248,135589,177699,177983,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	9202123	9265545	chr5:9202123-9265545	0	-	9202123	9202123	8553170	5	117,214,99,63,112,	0,22550,24745,35704,63310,
#Partially deleted in new
chr5	9237718	9380023	chr5:9237718-9380023	0	-	9237718	9237718	8553170	5	172,19,46,100,201,	0,43070,80653,99994,142104,
#Partially deleted in new
chr5	9363274	9422481	chr5:9363274-9422481	3	+	9363274	9363274	8553170	4	149,48,60,134,	0,4073,27662,59073,
#Deleted in new
chr5	9498400	9498775	chr5:9498400-9498775	3	-	9498400	9498400	8553170	1	375,	0,
#Partially deleted in new
chr5	9511332	9518086	chr5:9511332-9518086	3	+	9511332	9511332	789624	3	78,86,1515,	0,647,5239,
#Partially deleted in new
chr5	9519852	9523178	chr5:9519852-9523178	3	-	9519852	9519852	8553170	2	116,427,	0,2899,
#Deleted in new
chr5	9546199	9550609	chr5:9546199-9550609	3	+	9546199	9546199	789624	3	331,160,1308,	0,2790,3102,
#Deleted in new
chr5	9546289	9549590	chr5:9546289-9549590	0	+	9546289	9546289	8553170	2	241,601,	0,2700,
#Deleted in new
chr5	9548835	9548905	chr5:9548835-9548905	3	+	9548835	9548835	789624	1	70,	0,
#Partially deleted in new
chr5	9621376	9658458	chr5:9621376-9658458	3	-	9621376	9621376	8553170	3	248,137,35,	0,2089,37047,
#Deleted in new
chr5	9628996	9630355	chr5:9628996-9630355	3	-	9629132	9630032	789624	1	1359,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	9629445	9712378	chr5:9629445-9712378	0	-	9629445	9629912	789624	2	547,207,	0,82726,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	9629728	9712200	chr5:9629728-9712200	0	-	9629728	9629912	789624	3	264,161,29,	0,29692,82443,
#Partially deleted in new
chr5	9641304	9658793	chr5:9641304-9658793	1	-	9641304	9641304	8553170	4	201,70,74,119,	0,567,4257,17370,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	9641314	9903826	chr5:9641314-9903826	3	-	9641314	9641314	5263520	13	191,70,161,81,220,153,67,160,223,35,82,102,302,	0,557,18106,18586,70857,71751,72470,72765,124156,242018,242608,261337,262210,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	9641404	9712236	chr5:9641404-9712236	1	-	9641404	9641404	8553170	3	101,70,65,	0,467,70767,
#Deleted in new
chr5	9760906	9761013	chr5:9760906-9761013	7	+	9760906	9760906	16724991	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	9854376	9889937	chr5:9854376-9889937	3	+	9854376	9854376	8553170	2	171,328,	0,35233,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	9862881	9884028	chr5:9862881-9884028	1	-	9862881	9862881	8553170	4	231,57,35,106,	0,4252,20451,21041,
#Partially deleted in new
chr5	9862922	9902678	chr5:9862922-9902678	1	-	9862922	9862922	8553170	4	190,125,77,27,	0,7177,21000,39729,
#Deleted in new
chr5	10057501	10057807	chr5:10057501-10057807	3	+	10057501	10057501	8553170	1	306,	0,
#Deleted in new
chr5	10064242	10064476	chr5:10064242-10064476	3	-	10064242	10064242	8553170	1	234,	0,
#Deleted in new
chr5	10070530	10070841	chr5:10070530-10070841	3	+	10070530	10070530	8553170	1	311,	0,
#Deleted in new
chr5	10082570	10082772	chr5:10082570-10082772	3	+	10082570	10082570	8553170	1	202,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	10137137	10138365	chr5:10137137-10138365	3	+	10137137	10137137	8553170	2	129,814,	0,414,
#Deleted in new
chr5	10168782	10169006	chr5:10168782-10169006	3	+	10168782	10168782	8553170	1	224,	0,
#Deleted in new
chr5	10171029	10171214	chr5:10171029-10171214	3	-	10171029	10171029	8553170	1	185,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	10195120	10197628	chr5:10195120-10197628	3	-	10195120	10195120	8553170	1	2508,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	10195186	10197622	chr5:10195186-10197622	3	-	10195186	10195186	8553170	1	2436,	0,
#Deleted in new
chr5	10203599	10204040	chr5:10203599-10204040	3	-	10203599	10203599	8553170	1	441,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	10226329	10249896	chr5:10226329-10249896	1	-	10227440	10235213	789624	6	1318,51,138,315,67,39,	0,8881,10148,12712,18104,23528,
#Partially deleted in new
chr5	10226732	10249886	chr5:10226732-10249886	3	-	10227440	10249873	789624	5	915,51,138,290,29,	0,8478,9745,12334,23125,
#Partially deleted in new
chr5	10226955	10249897	chr5:10226955-10249897	1	-	10227440	10249873	789624	4	692,138,290,40,	0,9522,12111,22902,
#Partially deleted in new
chr5	10227557	10249885	chr5:10227557-10249885	0	-	10239042	10249873	789624	4	90,138,315,28,	0,8920,11484,22300,
#Partially deleted in new
chr5	10227579	10249888	chr5:10227579-10249888	0	-	10227579	10227579	8553170	5	68,51,94,290,31,	0,7631,8942,11487,22278,
#Partially deleted in new
chr5	10227609	10249888	chr5:10227609-10249888	0	-	10236896	10249873	789624	6	38,51,138,203,290,31,	0,7601,8868,9228,11457,22248,
#Partially deleted in new
chr5	10236147	10249888	chr5:10236147-10249888	0	-	10236147	10236147	8553170	3	468,290,31,	0,2919,13710,
#Partially deleted in new
chr5	10248324	10249915	chr5:10248324-10249915	3	+	10248324	10248324	8553170	2	171,517,	0,1074,
#Partially deleted in new
chr5	10249920	10266412	chr5:10249920-10266412	3	+	10250340	10264783	0	11	525,61,165,199,193,150,120,186,138,181,1757,	0,4224,4753,6034,8190,8465,10871,11639,12560,13213,14735,
#Partially deleted in new
chr5	10249928	10265078	chr5:10249928-10265078	1	+	10250003	10264783	789624	11	117,61,165,199,193,150,120,186,138,181,423,	0,4216,4745,6026,8182,8457,10863,11631,12552,13205,14727,
#Partially deleted in new
chr5	10250215	10264925	chr5:10250215-10264925	1	+	10250340	10264783	789624	10	230,61,199,193,150,120,186,138,181,270,	0,3929,5739,7895,8170,10576,11344,12265,12918,14440,
#Partially deleted in new
chr5	10250242	10258247	chr5:10250242-10258247	0	+	10250242	10255975	789624	4	203,43,199,137,	0,4553,5712,7868,
#Partially deleted in new
chr5	10250308	10255030	chr5:10250308-10255030	0	+	10250308	10250308	8553170	3	137,61,357,	0,3836,4365,
#Partially deleted in new
chr5	10250318	10262201	chr5:10250318-10262201	0	+	10250318	10250318	8553170	5	127,193,150,120,642,	0,7792,8067,10473,11241,
#Partially deleted in new
chr5	10250318	10254584	chr5:10250318-10254584	0	+	10250318	10250318	8553170	2	127,440,	0,3826,
#Partially deleted in new
chr5	10250318	10260899	chr5:10250318-10260899	0	+	10250340	10258140	789624	4	127,193,150,108,	0,7792,8067,10473,
#Partially deleted in new
chr5	10250340	10258140	chr5:10250340-10258140	1	+	10250340	10258140	789624	2	105,30,	0,7770,
#Partially deleted in new
chr5	10250359	10258535	chr5:10250359-10258535	0	+	10250359	10254806	789624	6	86,61,73,199,193,150,	0,3785,4406,5595,7751,8026,
#Partially deleted in new
chr5	10250536	10264902	chr5:10250536-10264902	1	+	10254153	10264783	789624	11	357,61,165,199,193,150,120,186,138,181,247,	0,3608,4137,5418,7574,7849,10255,11023,11944,12597,14119,
#Partially deleted in new
chr5	10250538	10265011	chr5:10250538-10265011	1	+	10254153	10264783	0	10	355,61,199,193,150,120,186,138,181,356,	0,3606,5416,7572,7847,10253,11021,11942,12595,14117,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	10257885	10258535	chr5:10257885-10258535	0	+	10257885	10257885	8553170	2	418,150,	0,500,
#Partially deleted in new
chr5	10258385	10261187	chr5:10258385-10261187	0	+	10258385	10258385	8553170	2	150,396,	0,2406,
#Partially deleted in new
chr5	10261974	10264921	chr5:10261974-10264921	0	+	10261974	10261974	8553170	3	644,181,266,	0,1159,2681,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	10264596	10267146	chr5:10264596-10267146	3	-	10264596	10264596	8553170	1	2550,	0,
#Partially deleted in new
chr5	10269488	10269918	chr5:10269488-10269918	3	-	10269488	10269488	8553170	1	430,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	10275874	10282288	chr5:10275874-10282288	0	-	10275874	10275874	8553170	2	350,92,	0,6322,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	10279276	10308026	chr5:10279276-10308026	3	-	10280452	10290762	789624	6	1356,92,143,108,234,402,	0,2920,7077,9145,11271,28348,
#Partially deleted in new
chr5	10280465	10307563	chr5:10280465-10307563	0	-	10280465	10280465	8553170	5	167,143,108,234,49,	0,5888,7956,10082,27049,
#Partially deleted in new
chr5	10286131	10307603	chr5:10286131-10307603	0	-	10286131	10286131	8553170	4	365,108,234,89,	0,2290,4416,21383,
#Partially deleted in new
chr5	10286172	10307859	chr5:10286172-10307859	0	-	10286172	10286172	8553170	4	324,108,234,235,	0,2249,4375,21452,
#Partially deleted in new
chr5	10290403	10307839	chr5:10290403-10307839	0	-	10290403	10290403	8553170	2	378,215,	0,17221,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	10292040	10292148	chr5:10292040-10292148	3	-	10292040	10292040	8553170	1	108,	0,
#Deleted in new
chr5	10307196	10307548	chr5:10307196-10307548	0	-	10307196	10307196	8553170	2	184,34,	0,318,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	10337276	10337386	chr5:10337276-10337386	3	+	10337276	10337276	8553170	1	110,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	10342812	10343131	chr5:10342812-10343131	3	+	10342812	10342812	8553170	1	319,	0,
#Deleted in new
chr5	10352700	10353601	chr5:10352700-10353601	3	-	10352700	10352700	8553170	1	901,	0,
#Partially deleted in new
chr5	10353702	10433961	chr5:10353702-10433961	1	+	10353898	10433684	789624	25	215,97,74,73,169,190,62,33,52,59,81,69,75,135,120,101,138,205,70,182,135,90,133,136,368,	0,24095,25056,33291,36629,37839,40379,41050,43590,47081,48356,48681,48830,49704,51855,53399,56436,57630,60730,61785,63567,70032,72687,76190,79891,
#Partially deleted in new
chr5	10353710	10391574	chr5:10353710-10391574	0	+	10353898	10390375	789624	5	207,97,74,169,33,	0,24087,25048,36621,37831,
#Partially deleted in new
chr5	10353714	10434285	chr5:10353714-10434285	0	+	10353714	10353714	8553170	25	203,97,74,144,73,169,190,62,33,52,1356,69,75,135,120,101,138,205,70,182,135,90,133,136,692,	0,24083,25044,28085,33279,36617,37827,40367,41038,43578,47069,48669,48818,49692,51843,53387,56424,57618,60718,61773,63555,70020,72675,76178,79879,
#Partially deleted in new
chr5	10353715	10433957	chr5:10353715-10433957	1	+	10353898	10433684	789624	23	202,73,169,190,62,33,52,59,81,69,75,135,120,101,138,205,70,182,135,90,133,136,364,	0,33278,36616,37826,40366,41037,43577,47068,48343,48668,48817,49691,51842,53386,56423,57617,60717,61772,63554,70019,72674,76177,79878,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr5	10353766	10440388	chr5:10353766-10440388	3	+	10353898	10433684	789624	26	151,97,74,144,73,169,190,62,33,52,59,81,69,75,135,120,101,138,205,70,182,135,90,133,136,6795,	0,24031,24992,28033,33227,36565,37775,40315,40986,43526,47017,48292,48617,48766,49640,51791,53335,56372,57566,60666,61721,63503,69968,72623,76126,79827,
#Partially deleted in new
chr5	10353898	10390372	chr5:10353898-10390372	1	+	10353898	10390372	789624	4	19,97,74,41,	0,23899,24860,36433,
#Partially deleted in new
chr5	10353967	10390491	chr5:10353967-10390491	0	+	10353967	10353967	8553170	6	29,97,74,144,73,160,	0,23830,24791,27832,33026,36364,
#Partially deleted in new
chr5	10354638	10390492	chr5:10354638-10390492	0	+	10354638	10354638	8553170	6	33,97,74,144,73,161,	0,23159,24120,27161,32355,35693,
#Partially deleted in new
chr5	10386924	10390500	chr5:10386924-10390500	0	+	10386924	10386924	8553170	2	142,169,	0,3407,
#Deleted in new
chr5	10400932	10402451	chr5:10400932-10402451	0	+	10400932	10400932	8553170	3	554,81,68,	0,1126,1451,
#Partially deleted in new
chr5	10401856	10433684	chr5:10401856-10433684	1	+	10401992	10433684	789624	15	283,69,75,135,120,101,138,205,70,182,135,90,133,136,91,	0,527,676,1550,3701,5245,8282,9476,12576,13631,15413,21878,24533,28036,31737,
#Partially deleted in new
chr5	10410152	10423835	chr5:10410152-10423835	0	+	10410152	10410152	8553170	6	124,205,70,197,135,101,	0,1180,4280,5320,7117,13582,
#Partially deleted in new
chr5	10413273	10422036	chr5:10413273-10422036	0	+	10413273	10413273	8553170	5	177,70,182,141,106,	0,1159,2214,3996,8657,
#Partially deleted in new
chr5	10415598	10417451	chr5:10415598-10417451	0	+	10415598	10415598	8553170	2	71,182,	0,1671,
#Partially deleted in new
chr5	10433928	10437849	chr5:10433928-10437849	0	+	10433928	10433928	8553170	2	279,1055,	0,2866,
#Deleted in new
chr5	10441289	10441792	chr5:10441289-10441792	3	-	10441289	10441289	8553170	2	84,105,	0,398,
#Partially deleted in new
chr5	10441523	10465024	chr5:10441523-10465024	3	+	10442167	10464947	789624	6	480,172,124,162,176,177,	0,603,6736,8428,19660,23324,
#Partially deleted in new
chr5	10441875	10465028	chr5:10441875-10465028	1	+	10442167	10464947	789624	5	423,124,162,176,181,	0,6384,8076,19308,22972,
#Partially deleted in new
chr5	10441875	10472029	chr5:10441875-10472029	0	+	10441875	10441875	8553170	5	423,124,162,176,220,	0,6384,8076,19308,29934,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	10441953	10461469	chr5:10441953-10461469	0	+	10441953	10441953	8553170	5	50,172,124,162,286,	0,173,6306,7998,19230,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	10442080	10461538	chr5:10442080-10461538	0	+	10442080	10442080	8553170	4	218,124,162,355,	0,6179,7871,19103,
#Deleted in new
chr5	10478036	10478145	chr5:10478036-10478145	3	+	10478036	10478036	5263520	1	109,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	10479370	10482309	chr5:10479370-10482309	3	+	10479370	10479370	8553170	2	47,436,	0,2503,
#Partially deleted in new
chr5	10488819	10489142	chr5:10488819-10489142	7	+	10488819	10488819	16724991	1	323,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	10493526	10502728	chr5:10493526-10502728	3	-	10493526	10493526	789624	3	566,40,1524,	0,1747,7678,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	10504995	10509194	chr5:10504995-10509194	1	-	10504995	10504995	789624	3	529,107,138,	0,1473,4061,
#Partially deleted in new
chr5	10505442	10522084	chr5:10505442-10522084	3	-	10505442	10505442	789624	3	82,107,329,	0,1026,16313,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	10541453	10543192	chr5:10541453-10543192	3	+	10541453	10541453	8553170	1	1739,	0,
#Deleted in new
chr5	10556581	10556815	chr5:10556581-10556815	3	+	10556581	10556581	8553170	1	234,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	10564329	10649624	chr5:10564329-10649624	0	+	10564467	10624825	789624	5	504,130,457,141,359,	0,54003,60395,73698,84936,
#Partially deleted in new
chr5	10564467	10657816	chr5:10564467-10657816	3	+	10564467	10650113	789624	4	366,130,141,8551,	0,53865,73560,84798,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	10627259	10628225	chr5:10627259-10628225	3	-	10627259	10627259	8553170	2	228,294,	0,672,
#Deleted in new
chr5	10652210	10655925	chr5:10652210-10655925	7	-	10652210	10652210	16724991	2	676,124,	0,3591,
#Deleted in new
chr5	10664494	10665113	chr5:10664494-10665113	7	-	10664494	10664494	16724991	1	619,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	10675316	10675575	chr5:10675316-10675575	3	-	10675316	10675316	8553170	1	259,	0,
#Deleted in new
chr5	10676095	10676423	chr5:10676095-10676423	3	-	10676095	10676095	8553170	1	328,	0,
#Partially deleted in new
chr5	10679229	10761272	chr5:10679229-10761272	3	-	10681055	10761068	789624	4	1940,43,97,259,	0,4299,68945,81784,
#Partially deleted in new
chr5	10680433	10761228	chr5:10680433-10761228	1	-	10680706	10761068	789624	3	736,97,215,	0,67741,80580,
#Partially deleted in new
chr5	10681090	10761136	chr5:10681090-10761136	0	-	10681090	10681090	8553170	4	79,263,97,123,	0,2218,67084,79923,
#Partially deleted in new
chr5	10683095	10761225	chr5:10683095-10761225	0	-	10683095	10683095	8553170	3	476,97,212,	0,65079,77918,
#Partially deleted in new
chr5	10733771	10761199	chr5:10733771-10761199	0	-	10733771	10733771	8553170	3	497,97,186,	0,14403,27242,
#Partially deleted in new
chr5	10748082	10761101	chr5:10748082-10761101	0	-	10748082	10748082	8553170	2	189,88,	0,12931,
#Partially deleted in new
chr5	10775057	10777062	chr5:10775057-10777062	3	-	10775057	10775057	8553170	2	243,99,	0,1906,
#Partially deleted in new
chr5	10971839	11904043	chr5:10971839-11904043	3	-	10973452	11903853	789624	22	1874,74,132,127,85,211,151,174,186,118,184,214,133,256,195,565,173,117,35,113,137,227,	0,9933,16271,20711,46134,50929,110856,126735,139018,145610,187736,227608,264851,374532,392856,412825,425191,439696,440195,593104,760296,931977,
#Partially deleted in new
chr5	10972531	11384771	chr5:10972531-11384771	0	-	10972531	10972531	8553170	16	1182,74,132,127,85,211,151,174,186,118,184,214,133,256,195,262,	0,9241,15579,20019,45442,50237,110164,126043,138326,144918,187044,226916,264159,373840,392164,411978,
#Partially deleted in new
chr5	10972880	11903980	chr5:10972880-11903980	0	-	10986682	11903853	789624	22	833,74,104,132,127,85,211,151,75,174,186,118,184,214,133,256,195,117,35,113,137,164,	0,8892,13757,15230,19670,45093,49888,109815,111000,125694,137977,144569,186695,226567,263810,373491,391815,438655,439154,592063,759255,930936,
#Partially deleted in new
chr5	10972894	11589019	chr5:10972894-11589019	1	-	10973452	11564957	789624	21	819,74,132,127,85,211,151,174,186,118,184,214,133,256,195,565,173,117,35,113,274,	0,8878,15216,19656,45079,49874,109801,125680,137963,144555,186681,226553,263796,373477,391801,411770,424136,438641,439140,592049,615851,
#Partially deleted in new
chr5	10972932	11117492	chr5:10972932-11117492	1	-	10973452	11082770	789624	11	781,74,132,127,85,211,58,91,174,186,43,	0,8840,15178,19618,45041,49836,109763,109823,125642,137925,144517,
#Partially deleted in new
chr5	10973188	11904043	chr5:10973188-11904043	0	-	11364806	11903853	789624	21	525,74,132,127,85,211,151,174,186,118,184,214,133,256,195,173,117,35,113,137,227,	0,8584,14922,19362,44785,49580,109507,125386,137669,144261,186387,226259,263502,373183,391507,423842,438347,438846,591755,758947,930628,
#Partially deleted in new
chr5	10973339	11588848	chr5:10973339-11588848	1	-	10973452	11564957	789624	19	374,74,132,127,85,211,151,174,186,118,184,214,133,256,195,117,35,113,103,	0,8433,14771,19211,44634,49429,109356,125235,137518,144110,186236,226108,263351,373032,391356,438196,438695,591604,615406,
#Partially deleted in new
chr5	10973586	11018060	chr5:10973586-11018060	0	-	10973586	10973586	8553170	4	127,74,127,87,	0,8186,18964,44387,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	11027199	11027307	chr5:11027199-11027307	3	+	11027199	11027199	8553170	1	108,	0,
#Partially deleted in new
chr5	11346427	11588848	chr5:11346427-11588848	0	-	11346427	11346427	8553170	4	200,195,113,103,	0,18268,218516,242318,
#Partially deleted in new
chr5	11346591	11903242	chr5:11346591-11903242	0	-	11346591	11732267	789624	7	36,195,117,35,113,137,71,	0,18104,64944,65443,218352,385544,556580,
#Partially deleted in new
chr5	11346594	11384912	chr5:11346594-11384912	0	-	11346594	11346594	8553170	3	33,279,248,	0,18017,38070,
#Partially deleted in new
chr5	11364597	11384937	chr5:11364597-11384937	0	-	11364597	11364597	8553170	2	293,273,	0,20067,
#Partially deleted in new
chr5	11364856	11903192	chr5:11364856-11903192	0	-	11364856	11364856	8553170	6	34,117,35,113,137,139,	0,46679,47178,200087,367279,538197,
#Deleted in new
chr5	11384981	11386011	chr5:11384981-11386011	0	-	11384981	11384981	8553170	2	248,261,	0,769,
#Partially deleted in new
chr5	11385024	11588811	chr5:11385024-11588811	0	-	11385024	11564957	789624	6	205,173,117,35,113,77,	0,12006,26511,27010,179919,203710,
#Partially deleted in new
chr5	11397092	11903385	chr5:11397092-11903385	0	-	11397092	11732267	789624	6	111,117,35,113,137,214,	0,14443,14942,167851,335043,506079,
#Partially deleted in new
chr5	11508370	11903979	chr5:11508370-11903979	0	-	11508370	11508370	8553170	4	70,113,137,163,	0,56573,223765,395446,
#Deleted in new
chr5	12297398	12297504	chr5:12297398-12297504	3	-	12297398	12297398	8553170	1	106,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	12574856	12804363	chr5:12574856-12804363	0	+	12574856	12574856	8553170	4	196,82,102,160,	0,20840,136341,229347,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	12574856	12655687	chr5:12574856-12655687	1	+	12574856	12574856	8553170	3	196,82,1041,	0,20840,79790,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	12574856	12759648	chr5:12574856-12759648	3	+	12574856	12574856	8553170	4	196,82,102,290,	0,20840,136341,184502,
#Deleted in new
chr5	12794099	12794731	chr5:12794099-12794731	7	-	12794099	12794099	16724991	1	632,	0,
#Deleted in new
chr5	12794730	12795522	chr5:12794730-12795522	7	+	12794730	12794730	16724991	1	792,	0,
#Partially deleted in new
chr5	12914067	13032886	chr5:12914067-13032886	3	-	12914067	12914067	8553170	3	104,65,101,	0,117943,118718,
#Partially deleted in new
chr5	13175845	13179572	chr5:13175845-13179572	3	+	13175845	13175845	8553170	2	142,107,	0,3620,
#Deleted in new
chr5	13250234	13250662	chr5:13250234-13250662	7	-	13250234	13250234	16724991	1	428,	0,
#Deleted in new
chr5	13553653	13553966	chr5:13553653-13553966	7	-	13553653	13553653	16724991	1	313,	0,
#Partially deleted in new
chr5	13637918	13638381	chr5:13637918-13638381	7	-	13637918	13637918	16724991	1	463,	0,
#Partially deleted in new
chr5	13690330	13944543	chr5:13690330-13944543	3	-	13691983	13944438	789624	79	1805,232,153,213,216,204,206,220,246,150,122,191,115,244,183,156,317,136,138,180,204,177,115,232,268,154,131,173,199,224,214,123,135,143,202,177,242,147,154,108,135,195,188,179,173,225,213,157,164,154,200,241,239,63,219,236,202,134,88,191,240,166,146,172,207,322,86,108,216,123,108,114,177,138,222,161,85,135,162,	0,10309,10953,17792,24074,26156,26984,28551,30669,37176,39108,44800,45487,46921,60747,61803,62902,63872,68515,72391,75645,78629,79170,80418,86108,86871,90498,95848,98385,101663,103184,103605,117260,118713,119728,121316,124274,127217,130015,132932,133868,139179,139695,140266,149025,150575,151361,154506,160321,169121,172217,174066,175337,175889,177443,180436,181233,186353,192397,192573,194658,195633,200645,204319,209875,210921,211722,221055,223412,224189,226017,226812,228845,230149,231776,232949,237763,240779,254051,
#Partially deleted in new
chr5	13762750	13771282	chr5:13762750-13771282	0	-	13762750	13762750	8553170	5	151,177,115,232,85,	0,6209,6750,7998,8447,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	13807657	13810523	chr5:13807657-13810523	0	-	13807657	13807657	8553170	3	68,143,465,	0,1386,2401,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	13860302	13900749	chr5:13860302-13900749	3	+	13860302	13860302	8553170	3	213,157,3215,	0,36286,37232,
#Partially deleted in new
chr5	13860337	13897771	chr5:13860337-13897771	0	+	13860337	13860337	8553170	3	218,157,237,	0,36251,37197,
#Partially deleted in new
chr5	13911356	13932456	chr5:13911356-13932456	0	-	13911356	13911356	8553170	12	137,216,123,108,114,226,138,222,161,85,135,416,	0,2386,3163,4991,5786,7819,9123,10750,11923,16737,19753,20684,
#Partially deleted in new
chr5	14143701	14510204	chr5:14143701-14510204	3	+	14143725	14508422	0	57	181,75,115,193,513,123,192,132,231,123,192,170,175,196,167,120,192,150,115,116,123,195,116,67,110,70,90,93,112,191,102,143,100,244,293,171,96,149,67,104,70,90,93,51,78,192,178,797,248,139,28,163,122,79,201,139,2325,	0,127123,136620,143169,147014,149310,153370,160759,172811,187076,192834,214476,215655,220030,220948,223158,225006,225672,230527,234310,237428,243736,244030,244911,245587,246529,247199,250336,253341,255178,257261,262146,262871,276076,317317,319053,321843,327616,328890,330292,333192,335559,336217,337532,337839,338880,341367,343762,348865,353177,354145,354387,354817,358877,360691,363420,364178,
#Partially deleted in new
chr5	14143701	14290887	chr5:14143701-14290887	0	+	14143701	14143701	8553170	5	181,75,115,193,172,	0,127123,136620,143169,147014,
#Partially deleted in new
chr5	14143701	14287104	chr5:14143701-14287104	0	+	14143701	14143701	8553170	4	181,75,115,234,	0,127123,136620,143169,
#Partially deleted in new
chr5	14143836	14508676	chr5:14143836-14508676	0	+	14270844	14492571	789624	57	46,75,115,193,513,123,192,132,231,123,192,170,175,196,167,120,192,150,115,116,123,195,116,67,110,70,90,93,112,191,102,143,100,244,293,171,96,149,67,104,70,90,93,51,78,192,178,267,248,139,28,163,122,79,201,139,797,	0,126988,136485,143034,146879,149175,153235,160624,172676,186941,192699,214341,215520,219895,220813,223023,224871,225537,230392,234175,237293,243601,243895,244776,245452,246394,247064,250201,253206,255043,257126,262011,262736,275941,317182,318918,321708,327481,328755,330157,333057,335424,336082,337397,337704,338745,341232,343627,348730,353042,354010,354252,354682,358742,360556,363285,364043,
#Partially deleted in new
chr5	14183797	14399400	chr5:14183797-14399400	1	+	14183949	14399130	789624	30	162,75,115,193,513,123,192,132,231,123,192,170,175,196,167,120,192,150,115,116,123,195,116,67,110,70,90,93,112,521,	0,87027,96524,103073,106918,109214,113274,120663,132715,146980,152738,174380,175559,179934,180852,183062,184910,185576,190431,194214,197332,203640,203934,204815,205491,206433,207103,210240,213245,215082,
#Partially deleted in new
chr5	14290976	14297513	chr5:14290976-14297513	0	+	14290976	14290976	8553170	3	252,123,442,	0,2035,6095,
#Partially deleted in new
chr5	14290976	14532128	chr5:14290976-14532128	0	+	14290976	14531774	789624	51	252,123,192,132,231,123,192,170,175,196,167,120,192,150,115,116,123,195,116,67,110,70,90,93,112,191,102,143,100,244,293,171,96,149,67,104,70,90,93,51,78,192,178,797,248,139,28,163,122,79,385,	0,2035,6095,13484,25536,39801,45559,67201,68380,72755,73673,75883,77731,78397,83252,87035,90153,96461,96755,97636,98312,99254,99924,103061,106066,107903,109986,114871,115596,128801,170042,171778,174568,180341,181615,183017,185917,188284,188942,190257,190564,191605,194092,196487,201590,205902,206870,207112,207542,211602,240767,
#Partially deleted in new
chr5	14293040	14489165	chr5:14293040-14489165	0	+	14293040	14293040	8553170	43	94,192,132,231,123,192,170,175,196,167,120,192,150,115,116,123,195,116,67,110,70,90,93,112,191,102,143,100,244,293,171,96,149,67,104,70,90,93,51,78,192,178,1702,	0,4031,11420,23472,37737,43495,65137,66316,70691,71609,73819,75667,76333,81188,84971,88089,94397,94691,95572,96248,97190,97860,100997,104002,105839,107922,112807,113532,126737,167978,169714,172504,178277,179551,180953,183853,186220,186878,188193,188500,189541,192028,194423,
#Deleted in new
chr5	14387342	14387950	chr5:14387342-14387950	0	+	14387342	14387342	8553170	2	290,219,	0,389,
#Partially deleted in new
chr5	14388612	14397341	chr5:14388612-14397341	0	+	14388612	14388612	8553170	6	67,110,139,90,93,299,	0,676,1721,2288,5425,8430,
#Partially deleted in new
chr5	14399023	14420186	chr5:14399023-14420186	0	+	14399023	14399023	8553170	5	47,102,143,100,409,	0,1939,6824,7549,20754,
#Partially deleted in new
chr5	14406213	14419904	chr5:14406213-14419904	0	+	14406213	14406213	8553170	2	459,127,	0,13564,
#Deleted in new
chr5	14418782	14420021	chr5:14418782-14420021	0	+	14418782	14418782	8553170	2	48,244,	0,995,
#Deleted in new
chr5	14419813	14420800	chr5:14419813-14420800	0	+	14419813	14419813	8553170	2	208,343,	0,644,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	14440818	14466451	chr5:14440818-14466451	0	+	14440818	14440818	8553170	4	542,293,171,907,	0,20200,21936,24726,
#Partially deleted in new
chr5	14441042	14481618	chr5:14441042-14481618	0	+	14441248	14481618	789624	12	318,293,171,96,149,67,104,70,90,93,51,78,	0,19976,21712,24502,30275,31549,32951,35851,38218,38876,40191,40498,
#Partially deleted in new
chr5	14465588	14510201	chr5:14465588-14510201	1	+	14465637	14509471	789624	10	52,149,67,104,70,90,93,51,78,793,	0,5729,7003,8405,11305,13672,14330,15645,15952,43820,
#Partially deleted in new
chr5	14474011	14477333	chr5:14474011-14477333	0	+	14474011	14474011	8553170	2	86,440,	0,2882,
#Partially deleted in new
chr5	14479320	14481796	chr5:14479320-14481796	0	+	14479320	14479320	8553170	4	30,93,51,256,	0,598,1913,2220,
#Partially deleted in new
chr5	14482416	14487789	chr5:14482416-14487789	0	+	14482416	14482416	8553170	3	357,178,326,	0,2652,5047,
#Partially deleted in new
chr5	14488447	14510203	chr5:14488447-14510203	1	+	14488940	14508422	0	10	622,248,139,28,163,122,79,201,139,2324,	0,4119,8431,9399,9641,10071,14131,15945,18674,19432,
#Partially deleted in new
chr5	14492369	14496986	chr5:14492369-14496986	0	+	14492369	14492369	8553170	2	445,108,	0,4509,
#Deleted in new
chr5	14498138	14499181	chr5:14498138-14499181	0	+	14498138	14498138	8553170	2	113,663,	0,380,
#Partially deleted in new
chr5	14498515	14504674	chr5:14498515-14504674	0	+	14498515	14498515	8553170	3	125,79,282,	0,4063,5877,
#Partially deleted in new
chr5	14498515	14508333	chr5:14498515-14508333	0	+	14498515	14498515	8553170	4	125,79,201,454,	0,4063,5877,9364,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	14581774	14612720	chr5:14581774-14612720	3	+	14581894	14610314	789624	8	184,160,32,92,150,129,270,2580,	0,19190,19438,19576,20408,25555,26973,28366,
#Partially deleted in new
chr5	14600964	14607370	chr5:14600964-14607370	0	+	14600964	14600964	8553170	4	160,32,150,41,	0,248,1218,6365,
#Partially deleted in new
chr5	14610337	14615007	chr5:14610337-14615007	0	+	14610337	14610337	8553170	2	104,477,	0,4193,
#Deleted in new
chr5	14620019	14621313	chr5:14620019-14621313	7	+	14620019	14620019	16724991	1	1294,	0,
#Deleted in new
chr5	14639425	14641018	chr5:14639425-14641018	7	-	14639425	14639425	16724991	1	1593,	0,
#Partially deleted in new
chr5	14651940	14653329	chr5:14651940-14653329	7	-	14651940	14651940	16724991	1	1389,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	14661807	14664604	chr5:14661807-14664604	3	-	14661807	14661807	8553170	1	2797,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	14663102	14664275	chr5:14663102-14664275	1	-	14663102	14663102	8553170	2	241,397,	0,776,
#Partially deleted in new
chr5	14664663	14690270	chr5:14664663-14690270	0	+	14664825	14678705	789624	5	314,95,144,126,232,	0,14017,16800,22857,25375,
#Partially deleted in new
chr5	14664731	14674137	chr5:14664731-14674137	0	+	14664731	14664731	8553170	2	246,496,	0,8910,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	14664747	14699711	chr5:14664747-14699711	3	+	14664825	14693048	0	7	230,77,95,144,126,270,6858,	0,8894,13933,16716,22773,25291,28106,
#Partially deleted in new
chr5	14678755	14690151	chr5:14678755-14690151	0	+	14678755	14687539	789624	4	20,161,126,113,	0,2708,8765,11283,
#Partially deleted in new
chr5	14681549	14693400	chr5:14681549-14693400	0	+	14681549	14693048	789624	2	58,547,	0,11304,
#Partially deleted in new
chr5	14681575	14687940	chr5:14681575-14687940	0	+	14681575	14681575	8553170	2	49,420,	0,5945,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	14704799	14871785	chr5:14704799-14871785	3	-	14711196	14871447	789624	12	6511,100,124,130,96,93,135,171,84,119,217,434,	0,8074,8744,11906,37027,41070,44372,46269,51061,53680,64175,166552,
#Partially deleted in new
chr5	14711087	14717088	chr5:14711087-14717088	0	-	14711087	14711087	8553170	4	223,100,124,383,	0,1786,2456,5618,
#Partially deleted in new
chr5	14741291	14755888	chr5:14741291-14755888	0	-	14741291	14741291	8553170	6	87,96,93,135,171,28,	0,535,4578,7880,9777,14569,
#Partially deleted in new
chr5	14741456	14749227	chr5:14741456-14749227	0	-	14741456	14741456	8553170	3	466,93,56,	0,4413,7715,
#Deleted in new
chr5	14768161	14769150	chr5:14768161-14769150	0	-	14768296	14769150	789624	2	380,176,	0,813,
#Partially deleted in new
chr5	14768615	14871472	chr5:14768615-14871472	0	-	14768615	14768615	8553170	2	576,121,	0,102736,
#Partially deleted in new
chr5	14769006	14788217	chr5:14769006-14788217	0	-	14769006	14769006	8553170	2	185,102,	0,19109,
#Deleted in new
chr5	14797124	14798400	chr5:14797124-14798400	7	-	14797124	14797124	16724991	1	1276,	0,
#Deleted in new
chr5	14825928	14826012	chr5:14825928-14826012	3	-	14825928	14825928	5263520	1	84,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	14868414	14870362	chr5:14868414-14870362	0	-	14868414	14868414	8553170	1	1948,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	14868708	14871726	chr5:14868708-14871726	0	-	14871066	14871447	789624	2	322,1544,	0,1474,
#Deleted in new
chr5	14872331	14872713	chr5:14872331-14872713	3	+	14872331	14872331	8553170	1	382,	0,
#Deleted in new
chr5	14874399	14874711	chr5:14874399-14874711	7	-	14874399	14874399	16724991	1	312,	0,
#Deleted in new
chr5	14877666	14877919	chr5:14877666-14877919	7	-	14877666	14877666	16724991	1	253,	0,
#Deleted in new
chr5	14960231	14961393	chr5:14960231-14961393	7	+	14960231	14960231	16724991	1	1162,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	15110785	15110920	chr5:15110785-15110920	3	-	15110785	15110785	8553170	1	135,	0,
#Partially deleted in new
chr5	15112376	15117007	chr5:15112376-15117007	3	-	15112376	15112376	8553170	3	592,126,104,	0,3762,4527,
#Partially deleted in new
chr5	15192138	15266541	chr5:15192138-15266541	3	-	15192138	15192138	789624	3	311,119,128,	0,51510,74275,
#Deleted in new
chr5	15384219	15384853	chr5:15384219-15384853	7	+	15384219	15384219	16724991	1	634,	0,
#Deleted in new
chr5	15450700	15451811	chr5:15450700-15451811	7	+	15450700	15450700	16724991	1	1111,	0,
#Partially deleted in new
chr5	15500195	15939791	chr5:15500195-15939791	3	+	15500676	15937186	789624	4	518,90,612,3342,	0,115787,427694,436254,
#Partially deleted in new
chr5	15501437	15937219	chr5:15501437-15937219	1	+	15927903	15937186	789624	4	286,90,612,770,	0,114545,426452,435012,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	15602188	15607348	chr5:15602188-15607348	3	-	15602188	15602188	8553170	2	171,189,	0,4971,
#Deleted in new
chr5	15606759	15607249	chr5:15606759-15607249	1	-	15606759	15606759	8553170	2	272,90,	0,400,
#Partially deleted in new
chr5	15927887	15939795	chr5:15927887-15939795	1	+	15927888	15937186	789624	2	614,3346,	0,8562,
#Deleted in new
chr5	15935181	15935260	chr5:15935181-15935260	3	+	15935181	15935181	5263520	1	79,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	16033228	16033356	chr5:16033228-16033356	7	-	16033228	16033228	16724991	1	128,	0,
#Partially deleted in new
chr5	16067138	16179775	chr5:16067138-16179775	3	-	16067470	16179575	789624	4	655,193,156,737,	0,23750,110587,111900,
#Partially deleted in new
chr5	16067313	16177829	chr5:16067313-16177829	0	-	16067733	16177829	789624	2	480,104,	0,110412,
#Partially deleted in new
chr5	16090886	16180762	chr5:16090886-16180762	0	-	16090886	16090886	8553170	3	195,156,118,	0,86839,89758,
#Partially deleted in new
chr5	16129177	16141602	chr5:16129177-16141602	3	+	16129177	16129177	8553170	2	117,591,	0,11834,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	16180237	16185585	chr5:16180237-16185585	3	+	16180237	16180237	8553170	2	203,1863,	0,3485,
#Deleted in new
chr5	16192087	16192709	chr5:16192087-16192709	7	-	16192087	16192087	16724991	1	622,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	16373360	16440081	chr5:16373360-16440081	3	-	16373360	16373360	789624	8	476,211,214,193,65,542,223,196,	0,10773,57030,57425,57687,64013,65892,66525,
#Partially deleted in new
chr5	16428535	16432436	chr5:16428535-16432436	3	+	16428535	16428535	8553170	3	165,61,232,	0,3303,3669,
#Partially deleted in new
chr5	16451518	16465792	chr5:16451518-16465792	3	-	16451656	16465665	789624	6	266,144,113,163,261,752,	0,1494,6998,11589,11963,13522,
#Partially deleted in new
chr5	16473037	16478065	chr5:16473037-16478065	0	-	16474740	16478065	789624	4	309,586,127,32,	0,1611,4624,4996,
#Partially deleted in new
chr5	16473052	16508998	chr5:16473052-16508998	3	-	16474740	16508612	789624	7	2182,127,65,138,85,127,421,	0,4609,4981,5797,7956,10293,35525,
#Partially deleted in new
chr5	16473053	16617058	chr5:16473053-16617058	1	-	16474740	16616971	789624	9	2181,127,65,138,85,127,31,107,407,	0,4608,4980,5796,7955,10292,92709,98942,143598,
#Partially deleted in new
chr5	16475230	16509436	chr5:16475230-16509436	0	-	16475230	16475230	8553170	7	4,127,65,138,85,127,94,	0,2431,2803,3619,5778,8115,34112,
#Partially deleted in new
chr5	16482996	16508686	chr5:16482996-16508686	0	-	16482996	16482996	8553170	2	476,109,	0,25581,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	16615925	16629969	chr5:16615925-16629969	3	+	16615925	16615925	789624	4	561,255,342,516,	0,5852,9489,13528,
#Deleted in new
chr5	16616078	16617038	chr5:16616078-16617038	0	-	16616078	16616078	8553170	2	420,387,	0,573,
#Partially deleted in new
chr5	16617224	16621276	chr5:16617224-16621276	3	+	16617224	16617224	8553170	4	331,219,85,69,	0,594,3820,3983,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	16623003	16623095	chr5:16623003-16623095	3	-	16623003	16623003	8553170	1	92,	0,
#Boundary problem: need 41, got 0, diff 41, mapped 0.0
chr5	16661913	16936276	chr5:16661913-16936276	1	-	16666691	16935808	789624	41	4880,192,453,121,137,208,298,124,158,195,143,56,94,96,244,124,876,46,234,107,107,166,81,109,83,69,93,67,101,147,119,130,104,85,14,125,135,188,159,99,489,	0,6363,8612,9508,10775,11768,12939,14117,18033,19395,19957,21966,23824,27910,32457,37536,39049,40629,41011,42665,48994,49166,92914,96204,99550,100131,100631,101567,101741,102336,104166,107160,117631,118610,118814,119791,121421,132732,156095,215695,273874,
#Partially deleted in new
chr5	16665285	16936263	chr5:16665285-16936263	3	-	16666691	16935808	0	41	1508,192,453,121,137,208,298,124,158,195,143,56,94,96,244,124,876,46,234,107,115,125,81,109,83,69,93,67,101,147,119,130,104,85,14,125,135,188,159,99,476,	0,2991,5240,6136,7403,8396,9567,10745,14661,16023,16585,18594,20452,24538,29085,34164,35677,37257,37639,39293,45622,45835,89542,92832,96178,96759,97259,98195,98369,98964,100794,103788,114259,115238,115442,116419,118049,129360,152723,212323,270502,
#Partially deleted in new
chr5	16666379	16738414	chr5:16666379-16738414	1	-	16666691	16711191	789624	23	414,192,453,121,137,208,298,124,158,195,143,56,94,96,244,124,876,46,234,107,115,125,279,	0,1897,4146,5042,6309,7302,8473,9651,13567,14929,15491,17500,19358,23444,27991,33070,34583,36163,36545,38199,44528,44741,71756,
#Partially deleted in new
chr5	16666561	16742228	chr5:16666561-16742228	1	-	16666691	16711191	789624	23	232,192,453,121,137,208,298,124,158,195,143,56,94,96,244,124,876,46,234,107,115,125,425,	0,1715,3964,4860,6127,7120,8291,9469,13385,14747,15309,17318,19176,23262,27809,32888,34401,35981,36363,38017,44346,44559,75242,
#Partially deleted in new
chr5	16702976	16916527	chr5:16702976-16916527	0	-	16702976	16916108	789624	23	182,107,115,125,81,109,83,69,93,67,101,147,119,130,104,85,14,125,135,188,159,99,473,	0,1602,7931,8144,51851,55141,58487,59068,59568,60504,60678,61273,63103,66097,76568,77547,77751,78728,80358,91669,115032,174632,213078,
#Partially deleted in new
chr5	16702998	16741910	chr5:16702998-16741910	0	-	16702998	16702998	8553170	5	160,107,115,86,107,	0,1580,7909,8161,38805,
#Partially deleted in new
chr5	16702999	16741880	chr5:16702999-16741880	0	-	16702999	16702999	8553170	6	159,107,115,86,263,77,	0,1579,7908,8160,35136,38804,
#Partially deleted in new
chr5	16704578	16758226	chr5:16704578-16758226	0	-	16704578	16704578	8553170	5	107,115,125,81,109,	0,6329,6542,50249,53539,
#Partially deleted in new
chr5	16710671	16741909	chr5:16710671-16741909	0	-	16710671	16710671	8553170	3	351,125,106,	0,449,31132,
#Partially deleted in new
chr5	16710703	16713468	chr5:16710703-16713468	0	-	16710703	16710703	8553170	3	319,125,139,	0,417,2626,
#Partially deleted in new
chr5	16780733	16935938	chr5:16780733-16935938	0	-	16780733	16935808	789624	6	8,125,135,188,159,151,	0,971,2601,13912,37275,155054,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	16814516	16936259	chr5:16814516-16936259	1	-	16815448	16935808	0	4	947,159,99,472,	0,3492,63092,121271,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	16853993	16854114	chr5:16853993-16854114	7	+	16853993	16853993	16724991	1	121,	0,
#Partially deleted in new
chr5	16902293	16902641	chr5:16902293-16902641	7	-	16902293	16902293	16724991	1	348,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	16941842	16941951	chr5:16941842-16941951	3	-	16941842	16941842	8553170	1	109,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	17065597	17275353	chr5:17065597-17275353	0	+	17275216	17275353	789624	4	103,89,63,146,	0,23475,146522,209610,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	17107359	17107789	chr5:17107359-17107789	3	-	17107359	17107359	8553170	1	430,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	17117575	17117686	chr5:17117575-17117686	3	-	17117575	17117575	8553170	1	111,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	17130027	17217047	chr5:17130027-17217047	3	-	17130027	17130027	5263520	3	1873,97,971,	0,32441,86049,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	17156970	17157071	chr5:17156970-17157071	7	-	17156970	17156970	16724991	1	101,	0,
#Partially deleted in new
chr5	17202273	17203145	chr5:17202273-17203145	7	+	17202273	17202273	16724991	2	360,195,	0,677,
#Partially deleted in new
chr5	17216822	17276843	chr5:17216822-17276843	3	+	17275216	17275900	789624	2	75,1636,	0,58385,
#Partially deleted in new
chr5	17217559	17276834	chr5:17217559-17276834	1	+	17275216	17275900	789624	2	251,1627,	0,57648,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	17240610	17240715	chr5:17240610-17240715	3	+	17240610	17240610	8553170	1	105,	0,
#Deleted in new
chr5	17306380	17306960	chr5:17306380-17306960	7	+	17306380	17306380	16724991	1	580,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	17345615	17345955	chr5:17345615-17345955	3	+	17345615	17345615	8553170	1	340,	0,
#Deleted in new
chr5	17353694	17354624	chr5:17353694-17354624	7	-	17353694	17353694	16724991	1	930,	0,
#Deleted in new
chr5	17353874	17354424	chr5:17353874-17354424	5	-	17353874	17353874	16724991	1	550,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	17353909	17354899	chr5:17353909-17354899	3	+	17353909	17353909	8553170	2	101,766,	0,224,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	17369224	17375577	chr5:17369224-17375577	3	-	17369224	17369224	8553170	2	165,120,	0,6233,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	17378905	17387310	chr5:17378905-17387310	3	-	17378905	17378905	789624	3	1605,598,109,	0,5937,8296,
#Partially deleted in new
chr5	17404018	17441694	chr5:17404018-17441694	3	+	17404018	17404018	789624	2	70,226,	0,37450,
#Partially deleted in new
chr5	17404145	17441678	chr5:17404145-17441678	0	+	17404145	17404145	789624	2	206,210,	0,37323,
#Partially deleted in new
chr5	17436736	17441678	chr5:17436736-17441678	1	+	17436736	17436736	789624	2	477,210,	0,4732,
#Deleted in new
chr5	17444009	17445930	chr5:17444009-17445930	0	+	17444009	17444009	789624	2	225,304,	0,1617,
#Partially deleted in new
chr5	17444009	17486829	chr5:17444009-17486829	3	+	17486232	17486829	789624	4	225,142,228,628,	0,33605,39722,42192,
#Partially deleted in new
chr5	17491324	17491769	chr5:17491324-17491769	3	-	17491324	17491768	8553170	1	445,	0,
#Deleted in new
chr5	17495657	17495826	chr5:17495657-17495826	7	-	17495657	17495657	16724991	1	169,	0,
#Deleted in new
chr5	17498230	17498827	chr5:17498230-17498827	3	+	17498230	17498827	789624	1	597,	0,
#Deleted in new
chr5	17502042	17502363	chr5:17502042-17502363	7	-	17502042	17502042	16724991	1	321,	0,
#Deleted in new
chr5	17511832	17512238	chr5:17511832-17512238	7	-	17511832	17511832	16724991	1	406,	0,
#Deleted in new
chr5	17518366	17518963	chr5:17518366-17518963	3	+	17518366	17518963	789624	1	597,	0,
#Deleted in new
chr5	17521800	17522397	chr5:17521800-17522397	3	+	17521800	17522397	789624	1	597,	0,
#Deleted in new
chr5	17525234	17525831	chr5:17525234-17525831	3	+	17525234	17525831	789624	1	597,	0,
#Deleted in new
chr5	17528668	17529265	chr5:17528668-17529265	3	+	17528668	17529265	789624	1	597,	0,
#Deleted in new
chr5	17585161	17585758	chr5:17585161-17585758	3	-	17585161	17585758	789624	1	597,	0,
#Deleted in new
chr5	17587289	17587523	chr5:17587289-17587523	7	-	17587289	17587289	16724991	1	234,	0,
#Deleted in new
chr5	17590363	17590960	chr5:17590363-17590960	3	-	17590363	17590960	789624	1	597,	0,
#Deleted in new
chr5	17593797	17594394	chr5:17593797-17594394	3	-	17593797	17594394	789624	1	597,	0,
#Deleted in new
chr5	17597231	17597828	chr5:17597231-17597828	3	-	17597231	17597828	789624	1	597,	0,
#Deleted in new
chr5	17598431	17598559	chr5:17598431-17598559	7	-	17598431	17598431	16724991	1	128,	0,
#Deleted in new
chr5	17601881	17602134	chr5:17601881-17602134	7	-	17601881	17601881	16724991	1	253,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	17604176	17605377	chr5:17604176-17605377	3	+	17604780	17605377	789624	1	1201,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	17610495	17611583	chr5:17610495-17611583	3	+	17610989	17611583	789624	1	1088,	0,
#Deleted in new
chr5	17614780	17615111	chr5:17614780-17615111	7	-	17614780	17614780	16724991	1	331,	0,
#Deleted in new
chr5	17620532	17620939	chr5:17620532-17620939	7	-	17620532	17620532	16724991	1	407,	0,
#Deleted in new
chr5	17625550	17625959	chr5:17625550-17625959	7	-	17625550	17625550	16724991	1	409,	0,
#Deleted in new
chr5	17632087	17632684	chr5:17632087-17632684	3	+	17632087	17632684	789624	1	597,	0,
#Deleted in new
chr5	17634459	17635053	chr5:17634459-17635053	3	+	17634459	17635053	789624	1	594,	0,
#Partially deleted in new
chr5	17642961	17643228	chr5:17642961-17643228	7	-	17642961	17642961	16724991	1	267,	0,
#Partially deleted in new
chr5	17647711	17647944	chr5:17647711-17647944	7	-	17647711	17647711	16724991	1	233,	0,
#Partially deleted in new
chr5	17649045	17649643	chr5:17649045-17649643	7	+	17649045	17649045	16724991	1	598,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	17654372	17654643	chr5:17654372-17654643	7	-	17654372	17654372	16724991	1	271,	0,
#Partially deleted in new
chr5	17654869	17655847	chr5:17654869-17655847	3	-	17655127	17655538	789624	1	978,	0,
#Deleted in new
chr5	17669282	17669518	chr5:17669282-17669518	7	-	17669282	17669282	16724991	1	236,	0,
#Deleted in new
chr5	17670167	17670571	chr5:17670167-17670571	7	-	17670167	17670167	16724991	1	404,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	17684583	17955857	chr5:17684583-17955857	0	+	17684583	17684583	8553170	5	104,91,83,136,164,	0,84310,235643,242240,271110,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	17743795	17789670	chr5:17743795-17789670	1	+	17743795	17743795	8553170	5	218,142,91,95,240,	0,18358,25098,41849,45635,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	17743796	17933581	chr5:17743796-17933581	3	+	17743796	17743796	8553170	4	217,83,136,4224,	0,176430,183027,185561,
#Partially deleted in new
chr5	17802382	17929636	chr5:17802382-17929636	1	+	17802382	17802382	8553170	7	192,191,101,67,83,136,279,	0,47800,50223,70637,117844,124441,126975,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	17919227	17955837	chr5:17919227-17955837	0	+	17919227	17919227	8553170	4	96,83,136,144,	0,999,7596,36466,
#Deleted in new
chr5	18049231	18049661	chr5:18049231-18049661	5	+	18049231	18049231	16724991	1	430,	0,
#Deleted in new
chr5	18049549	18049872	chr5:18049549-18049872	7	+	18049549	18049549	16724991	1	323,	0,
#Deleted in new
chr5	18236122	18236196	chr5:18236122-18236196	3	+	18236122	18236122	8553170	1	74,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	18547311	18547605	chr5:18547311-18547605	3	+	18547311	18547311	8553170	1	294,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	18704432	18746173	chr5:18704432-18746173	3	-	18704432	18704432	8553170	2	62,176,	0,41565,
#Deleted in new
chr5	18886621	18887095	chr5:18886621-18887095	7	-	18886621	18886621	16724991	1	474,	0,
#Deleted in new
chr5	18893901	18894168	chr5:18893901-18894168	7	-	18893901	18893901	16724991	1	267,	0,
#Deleted in new
chr5	18908865	18909543	chr5:18908865-18909543	7	+	18908865	18908865	16724991	1	678,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	18958146	18958413	chr5:18958146-18958413	3	-	18958146	18958146	8553170	1	267,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	18965860	19142346	chr5:18965860-19142346	3	-	18965860	18965860	8553170	2	371,289,	0,176197,
#Partially deleted in new
chr5	19035196	19038740	chr5:19035196-19038740	3	-	19035196	19035196	8553170	2	837,61,	0,3483,
#Partially deleted in new
chr5	19035905	19038799	chr5:19035905-19038799	1	-	19035905	19035905	8553170	3	128,200,120,	0,1609,2774,
#Deleted in new
chr5	19041008	19041386	chr5:19041008-19041386	7	+	19041008	19041008	16724991	1	378,	0,
#Deleted in new
chr5	19233365	19234487	chr5:19233365-19234487	7	+	19233365	19233365	16724991	1	1122,	0,
#Partially deleted in new
chr5	19472950	19478636	chr5:19472950-19478636	0	-	19472950	19472950	8553170	2	766,133,	0,5553,
#Partially deleted in new
chr5	19473031	19988230	chr5:19473031-19988230	1	-	19473225	19838986	789624	13	685,252,118,122,137,254,188,168,120,295,484,119,145,	0,10269,29960,47625,70837,98547,118025,139402,248315,273910,365727,508028,515054,
#Partially deleted in new
chr5	19473047	19839244	chr5:19473047-19839244	1	-	19473225	19838986	789624	11	669,252,118,122,137,254,188,168,120,295,486,	0,10253,29944,47609,70821,98531,118009,139386,248299,273894,365711,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr5	19473047	20575873	chr5:19473047-20575873	3	-	19473225	19838986	789624	15	669,252,118,122,137,254,188,168,120,295,484,119,142,62,412,	0,10253,29944,47609,70821,98531,118009,139386,248299,273894,365711,508012,518825,782396,1102414,
#Partially deleted in new
chr5	19473572	19886272	chr5:19473572-19886272	1	-	19483348	19838986	789624	13	144,146,118,122,137,254,188,168,120,295,484,97,159,	0,9728,29419,47084,70296,98006,117484,138861,247774,273369,365186,404421,412541,
#Partially deleted in new
chr5	19473578	19988185	chr5:19473578-19988185	1	-	19483348	19838986	789624	13	138,143,118,122,137,254,188,168,120,295,484,119,100,	0,9722,29413,47078,70290,98000,117478,138855,247768,273363,365180,507481,514507,
#Partially deleted in new
chr5	19473614	19838824	chr5:19473614-19838824	0	-	19483348	19838824	789624	9	102,146,137,254,188,168,120,295,66,	0,9686,70254,97964,117442,138819,247732,273327,365144,
#Partially deleted in new
chr5	19502681	19988207	chr5:19502681-19988207	1	-	19502848	19838986	789624	10	428,122,137,254,188,168,120,295,484,122,	0,17975,41187,68897,88375,109752,218665,244260,336077,485404,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	19721390	19804028	chr5:19721390-19804028	0	-	19721390	19721390	8553170	3	76,295,207,	0,25551,82431,
#Partially deleted in new
chr5	19838971	19988198	chr5:19838971-19988198	0	-	19838971	19838971	8553170	4	271,59,119,113,	0,39060,142088,149114,
#Partially deleted in new
chr5	19839049	20575863	chr5:19839049-20575863	0	-	19839049	19839049	8553170	3	193,62,402,	0,416394,736412,
#Partially deleted in new
chr5	19839138	19988199	chr5:19839138-19988199	0	-	19839138	19839138	8553170	4	104,161,119,114,	0,8912,141921,148947,
#Deleted in new
chr5	20158661	20158956	chr5:20158661-20158956	7	-	20158661	20158661	16724991	1	295,	0,
#Partially deleted in new
chr5	20304044	20305448	chr5:20304044-20305448	7	-	20304044	20304044	16724991	1	1404,	0,
#Partially deleted in new
chr5	20305564	20331456	chr5:20305564-20331456	3	+	20305564	20305564	8553170	2	323,101,	0,25791,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	20611839	20937691	chr5:20611839-20937691	3	+	20611839	20611839	789624	12	146,57,45,147,61,85,98,108,562,166,79,133,	0,48872,58727,125115,196013,283643,321043,323092,324311,324979,325339,325719,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	20611849	20879458	chr5:20611849-20879458	0	+	20611849	20611849	8553170	5	136,57,61,70,93,	0,48862,196003,202479,267516,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	20612624	20614765	chr5:20612624-20614765	3	-	20612624	20612624	789624	2	420,89,	0,2052,
#Deleted in new
chr5	20830165	20830947	chr5:20830165-20830947	7	-	20830165	20830165	16724991	1	782,	0,
#Partially deleted in new
chr5	21196719	21196860	chr5:21196719-21196860	7	+	21196719	21196719	16724991	1	141,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	21323872	21341375	chr5:21323872-21341375	3	-	21323872	21323872	8553170	3	5198,65,191,	0,5693,17312,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	21341832	21544777	chr5:21341832-21544777	7	+	21341832	21341832	16724991	9	144,76,66,84,188,85,175,135,59,	0,63852,117845,119950,149488,153265,155189,159859,202886,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	21459496	21461990	chr5:21459496-21461990	4	+	21459496	21459496	16724991	3	88,66,208,	0,181,2286,
#Partially deleted in new
chr5	21459512	21474439	chr5:21459512-21474439	4	+	21459512	21459512	16724991	4	72,66,84,1083,	0,165,2270,13844,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	21459555	21589372	chr5:21459555-21589372	5	+	21459555	21459555	16724991	5	29,66,84,135,3843,	0,122,2227,42136,125974,
#Partially deleted in new
chr5	21459559	21501826	chr5:21459559-21501826	5	+	21459559	21459559	16724991	7	25,66,84,188,85,175,135,	0,118,2223,31761,35538,37462,42132,
#Deleted in new
chr5	21481326	21484011	chr5:21481326-21484011	7	-	21481326	21481326	16724991	1	2685,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	21493435	21494596	chr5:21493435-21494596	3	+	21493435	21493435	8553170	1	1161,	0,
#Deleted in new
chr5	21569754	21570045	chr5:21569754-21570045	3	+	21569754	21569754	8553170	1	291,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	21616261	21779522	chr5:21616261-21779522	3	+	21616261	21616261	8553170	4	336,140,111,265,	0,7709,158137,162996,
#Partially deleted in new
chr5	21750672	22853341	chr5:21750672-22853341	3	-	21751736	22078676	789624	14	1564,252,118,122,137,254,188,168,120,295,417,146,95,284,	0,4918,9885,14305,32685,51494,66272,91488,103998,224418,327773,461825,754597,1102385,
#Partially deleted in new
chr5	21751044	22853622	chr5:21751044-22853622	1	-	21751736	22078676	789624	15	1192,252,118,122,137,254,188,168,120,295,417,146,95,95,565,	0,4546,9513,13933,32313,51122,65900,91116,103626,224046,327401,461453,654212,754225,1102013,
#Partially deleted in new
chr5	21751496	22213750	chr5:21751496-22213750	1	-	21751736	22078676	789624	12	740,252,118,122,137,254,188,168,295,417,142,195,	0,4094,9061,13481,31861,50670,65448,90664,223594,326949,461001,462059,
#Partially deleted in new
chr5	21751694	21889847	chr5:21751694-21889847	0	-	21751694	21751694	8553170	10	542,252,118,122,137,254,188,168,120,263,	0,3896,8863,13283,31663,50472,65250,90466,102976,137890,
#Partially deleted in new
chr5	21751736	22212769	chr5:21751736-22212769	0	-	21751736	21751736	8553170	12	500,252,118,122,137,254,188,168,120,295,417,272,	0,3854,8821,13241,31621,50430,65208,90424,102934,223354,326709,460761,
#Deleted in new
chr5	21882584	21884310	chr5:21882584-21884310	7	+	21882584	21882584	16724991	1	1726,	0,
#Partially deleted in new
chr5	22078483	22212488	chr5:22078483-22212488	0	-	22078483	22078483	8553170	2	379,287,	0,133718,
#Partially deleted in new
chr5	22078700	22212729	chr5:22078700-22212729	0	-	22078700	22078700	8553170	3	162,172,232,	0,93640,133797,
#Deleted in new
chr5	22139246	22141468	chr5:22139246-22141468	3	-	22139246	22139246	8553170	3	354,87,60,	0,1919,2162,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	22142351	22152356	chr5:22142351-22152356	5	+	22142351	22142351	16724991	4	232,1295,137,253,	0,502,9508,9752,
#Partially deleted in new
chr5	22142351	22152356	chr5:22142351-22152356	5	+	22142351	22142351	16724991	4	232,75,137,253,	0,1722,9508,9752,
#Partially deleted in new
chr5	22142351	22152356	chr5:22142351-22152356	7	+	22142351	22142351	16724991	4	232,75,99,253,	0,1722,9546,9752,
#Deleted in new
chr5	22142372	22142903	chr5:22142372-22142903	5	+	22142372	22142372	16724991	2	211,50,	0,481,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	22278010	22638994	chr5:22278010-22638994	0	-	22278010	22278010	8553170	4	52,95,95,297,	0,127246,227259,360687,
#Deleted in new
chr5	22580224	22580819	chr5:22580224-22580819	7	-	22580224	22580224	16724991	1	595,	0,
#Deleted in new
chr5	23013047	23014527	chr5:23013047-23014527	3	+	23013047	23013047	8553170	2	79,361,	0,1119,
#Partially deleted in new
chr5	23262158	23263185	chr5:23262158-23263185	7	-	23262158	23262158	16724991	2	67,610,	0,417,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	23299154	23299262	chr5:23299154-23299262	3	+	23299154	23299154	8553170	1	108,	0,
#Deleted in new
chr5	23303564	23305143	chr5:23303564-23305143	7	-	23303564	23303564	16724991	1	1579,	0,
#Deleted in new
chr5	23329426	23329892	chr5:23329426-23329892	7	-	23329426	23329426	16724991	1	466,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	23443585	23526498	chr5:23443585-23526498	0	+	23493599	23526498	789624	11	39,136,145,108,50,157,102,272,68,194,266,	0,19086,49885,66334,74295,77437,78718,79028,79705,80748,82647,
#Deleted in new
chr5	23456467	23456850	chr5:23456467-23456850	7	+	23456467	23456467	16724991	1	383,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	23507154	23510027	chr5:23507154-23510027	0	+	23509033	23510027	789624	4	173,153,124,108,	0,1795,2315,2765,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	23507614	23528597	chr5:23507614-23528597	3	+	23509033	23527773	0	11	98,153,124,108,50,157,102,272,68,194,2365,	0,1335,1855,2305,10266,13408,14689,14999,15676,16719,18618,
#Partially deleted in new
chr5	23688926	23689386	chr5:23688926-23689386	7	+	23688926	23688926	16724991	2	19,427,	0,33,
#Deleted in new
chr5	23972187	23972294	chr5:23972187-23972294	3	-	23972187	23972187	8553170	1	107,	0,
#Deleted in new
chr5	23980586	23980938	chr5:23980586-23980938	7	+	23980586	23980586	16724991	1	352,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	23994501	23994603	chr5:23994501-23994603	3	-	23994501	23994501	8553170	1	102,	0,
#Deleted in new
chr5	24170369	24171246	chr5:24170369-24171246	7	+	24170369	24170369	16724991	1	877,	0,
#Partially deleted in new
chr5	24352308	24353443	chr5:24352308-24353443	3	-	24352308	24352308	8553170	2	454,33,	0,1102,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	24449350	24449615	chr5:24449350-24449615	3	-	24449350	24449350	8553170	1	265,	0,
#Partially deleted in new
chr5	24487099	24644978	chr5:24487099-24644978	3	-	24487662	24593490	789624	12	1054,252,109,122,137,254,188,168,120,295,354,385,	0,4476,5717,11298,18012,22466,24227,48012,48603,50280,106160,157494,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	24487145	24499521	chr5:24487145-24499521	0	-	24487145	24487145	8553170	5	1008,252,109,122,184,	0,4430,5671,11252,12192,
#Partially deleted in new
chr5	24487347	24644780	chr5:24487347-24644780	0	-	24498464	24593490	789624	11	806,252,109,122,254,188,168,120,295,354,187,	0,4228,5469,11050,22218,23979,47764,48355,50032,105912,157246,
#Deleted in new
chr5	24487531	24492963	chr5:24487531-24492963	0	-	24487531	24487531	8553170	3	622,252,147,	0,4044,5285,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	24554017	24613222	chr5:24554017-24613222	3	+	24554017	24554017	8553170	3	170,218,1403,	0,55742,57802,
#Deleted in new
chr5	24578293	24578561	chr5:24578293-24578561	7	-	24578293	24578293	16724991	1	268,	0,
#Partially deleted in new
chr5	24749373	24749772	chr5:24749373-24749772	7	-	24749373	24749373	16724991	1	399,	0,
#Deleted in new
chr5	24786841	24787024	chr5:24786841-24787024	7	-	24786841	24786841	16724991	1	183,	0,
#Deleted in new
chr5	24811480	24811548	chr5:24811480-24811548	3	+	24811480	24811480	8553170	1	68,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	24835279	24840583	chr5:24835279-24840583	3	-	24835279	24835279	789624	3	1872,83,335,	0,3576,4969,
#Partially deleted in new
chr5	24881942	24885461	chr5:24881942-24885461	3	-	24881942	24881942	8553170	2	360,212,	0,3307,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	24910593	24910695	chr5:24910593-24910695	3	+	24910593	24910593	8553170	1	102,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	25101017	25190956	chr5:25101017-25190956	1	-	25101017	25101017	8553170	5	2104,104,40,30,510,	0,35324,61212,66144,89429,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	25187799	25193543	chr5:25187799-25193543	1	+	25187799	25187799	8553170	4	1675,498,142,501,	0,2193,3092,5243,
#Partially deleted in new
chr5	25188058	25188778	chr5:25188058-25188778	3	-	25188058	25188058	8553170	1	720,	0,
#Partially deleted in new
chr5	25190409	25324386	chr5:25190409-25324386	1	+	25190409	25190409	8553170	7	81,80,125,118,101,128,437,	0,66874,68455,70163,107293,111808,133540,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	25190681	25306172	chr5:25190681-25306172	0	+	25190681	25190681	8553170	5	352,101,82,128,274,	0,107021,108297,111536,115217,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	25218972	25298612	chr5:25218972-25298612	3	-	25218972	25218972	8553170	5	77,147,126,123,85,	0,5810,25665,65737,79555,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	25297733	25311370	chr5:25297733-25311370	3	+	25297733	25297733	8553170	5	70,82,128,123,436,	0,1245,4484,8165,13201,
#Partially deleted in new
chr5	25319833	25321346	chr5:25319833-25321346	3	+	25319833	25319833	8553170	1	1513,	0,
#Partially deleted in new
chr5	25349840	25350073	chr5:25349840-25350073	3	+	25349840	25349840	8553170	1	233,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	25404732	25422855	chr5:25404732-25422855	1	-	25404732	25404732	8553170	3	361,78,126,	0,9034,17997,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	25413438	25445925	chr5:25413438-25445925	3	-	25413438	25413438	8553170	3	406,126,106,	0,9291,32381,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	25415645	25445907	chr5:25415645-25445907	0	-	25415645	25415645	8553170	3	155,126,88,	0,7084,30174,
#Deleted in new
chr5	25425411	25425599	chr5:25425411-25425599	3	-	25425411	25425411	8553170	1	188,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	25701216	25701324	chr5:25701216-25701324	3	-	25701216	25701216	8553170	1	108,	0,
#Partially deleted in new
chr5	25716270	25716715	chr5:25716270-25716715	3	+	25716270	25716270	8553170	1	445,	0,
#Deleted in new
chr5	25909502	25911234	chr5:25909502-25911234	7	+	25909502	25909502	16724991	1	1732,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	26012888	26013025	chr5:26012888-26013025	3	+	26012888	26012888	8553170	1	137,	0,
#Deleted in new
chr5	26669345	26669736	chr5:26669345-26669736	7	+	26669345	26669345	16724991	1	391,	0,
#Deleted in new
chr5	26669710	26669989	chr5:26669710-26669989	7	-	26669710	26669710	16724991	1	279,	0,
#Deleted in new
chr5	26670333	26670481	chr5:26670333-26670481	7	-	26670333	26670333	16724991	1	148,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	26711550	26749997	chr5:26711550-26749997	3	-	26711550	26711550	8553170	3	476,84,125,	0,22809,38322,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	26739752	26741183	chr5:26739752-26741183	7	-	26739752	26739752	16724991	1	1431,	0,
#Partially deleted in new
chr5	26880599	27038586	chr5:26880599-27038586	3	-	26881135	26988333	789624	12	1024,252,118,122,137,254,188,168,120,295,277,124,	0,5014,5366,9236,9828,21876,23037,25359,26119,35030,107506,157863,
#Partially deleted in new
chr5	26880685	26890833	chr5:26880685-26890833	0	-	26880685	26880685	8553170	5	938,252,118,122,406,	0,4928,5280,9150,9742,
#Partially deleted in new
chr5	26903007	27038586	chr5:26903007-27038586	0	-	26903007	26903007	8553170	6	817,168,120,295,277,124,	0,2951,3711,12622,85098,135455,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	26915754	27121150	chr5:26915754-27121150	0	-	26915754	26988333	789624	3	170,277,109,	0,72351,205287,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	27111568	27111674	chr5:27111568-27111674	3	+	27111568	27111568	8553170	1	106,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	27412612	27436411	chr5:27412612-27436411	3	-	27412612	27412612	8553170	4	77,101,54,259,	0,10888,15547,23540,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	27472291	27496401	chr5:27472291-27496401	3	+	27472291	27472291	789624	5	228,161,163,101,453,	0,3243,5347,21943,23657,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	27475664	27485186	chr5:27475664-27485186	1	+	27475664	27475664	8553170	4	31,90,163,261,	0,404,1974,9261,
#Deleted in new
chr5	28213358	28214559	chr5:28213358-28214559	7	-	28213358	28213358	16724991	1	1201,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	28286388	28287665	chr5:28286388-28287665	3	-	28286388	28286388	789624	2	498,25,	0,1252,
#Deleted in new
chr5	28624656	28624763	chr5:28624656-28624763	3	+	28624656	28624656	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	28782677	28809249	chr5:28782677-28809249	3	-	28782677	28782677	8553170	2	158,294,	0,26278,
#Deleted in new
chr5	28808537	28809255	chr5:28808537-28809255	7	+	28808537	28808537	16724991	1	718,	0,
#Deleted in new
chr5	28897784	28898274	chr5:28897784-28898274	7	-	28897784	28897784	16724991	1	490,	0,
#Deleted in new
chr5	28926815	28927023	chr5:28926815-28927023	7	+	28926815	28926815	16724991	1	208,	0,
#Deleted in new
chr5	28927028	28927284	chr5:28927028-28927284	7	+	28927028	28927028	16724991	1	256,	0,
#Deleted in new
chr5	28927297	28927459	chr5:28927297-28927459	7	-	28927297	28927297	16724991	1	162,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	29001759	29003357	chr5:29001759-29003357	7	+	29001759	29001759	16724991	2	282,745,	0,853,
#Deleted in new
chr5	29070495	29070610	chr5:29070495-29070610	3	+	29070495	29070495	8553170	1	115,	0,
#Partially deleted in new
chr5	29104879	29105438	chr5:29104879-29105438	7	+	29104879	29104879	16724991	2	166,97,	0,462,
#Partially deleted in new
chr5	29105567	29106861	chr5:29105567-29106861	7	-	29105567	29105567	16724991	1	1294,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	29143502	29162458	chr5:29143502-29162458	0	+	29143502	29143502	8553170	4	227,127,162,43,	0,2245,9956,18913,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	29143511	29153485	chr5:29143511-29153485	1	+	29143511	29143511	8553170	4	218,127,191,27,	0,2236,2759,9947,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	29153535	29172358	chr5:29153535-29172358	1	+	29153535	29153535	8553170	6	198,175,98,55,27,316,	0,8880,10881,11394,16024,18507,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	29164424	29167797	chr5:29164424-29167797	0	+	29164424	29164424	8553170	3	90,117,190,	0,505,3183,
#Partially deleted in new
chr5	29380295	29395981	chr5:29380295-29395981	3	-	29380295	29380295	789624	5	30,110,73,129,128,	0,1557,4024,9515,15558,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	29383103	29389940	chr5:29383103-29389940	1	-	29383103	29383103	8553170	3	200,73,130,	0,1216,6707,
#Deleted in new
chr5	29516004	29516504	chr5:29516004-29516504	7	+	29516004	29516004	16724991	1	500,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	29600675	29600868	chr5:29600675-29600868	7	+	29600675	29600675	16724991	1	193,	0,
#Deleted in new
chr5	29795937	29796268	chr5:29795937-29796268	7	+	29795937	29795937	16724991	1	331,	0,
#Deleted in new
chr5	29848683	29849218	chr5:29848683-29849218	7	-	29848683	29848683	16724991	1	535,	0,
#Deleted in new
chr5	29881708	29882945	chr5:29881708-29882945	7	-	29881708	29881708	16724991	1	1237,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	29948827	29949130	chr5:29948827-29949130	3	+	29948827	29948827	8553170	1	303,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	29979668	29983114	chr5:29979668-29983114	3	+	29979668	29979668	8553170	1	3446,	0,
#Deleted in new
chr5	30248349	30248893	chr5:30248349-30248893	7	+	30248349	30248349	16724991	1	544,	0,
#Deleted in new
chr5	30365404	30365684	chr5:30365404-30365684	7	-	30365404	30365404	16724991	1	280,	0,
#Deleted in new
chr5	31053564	31054153	chr5:31053564-31054153	7	+	31053564	31053564	16724991	1	589,	0,
#Deleted in new
chr5	31065969	31066132	chr5:31065969-31066132	7	-	31065969	31065969	16724991	1	163,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	31093976	31267610	chr5:31093976-31267610	3	-	31093976	31093976	8553170	5	83,31,107,35,125,	0,1634,18430,21570,173509,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	31193749	31329146	chr5:31193749-31329146	3	+	31267473	31323308	0	12	137,356,295,120,168,188,254,137,122,118,252,6329,	0,73596,100212,103539,105714,108361,111424,119568,122458,123625,123923,129068,
#Partially deleted in new
chr5	31193749	31318346	chr5:31193749-31318346	1	+	31267638	31318034	789624	11	137,356,295,120,168,188,254,137,122,118,674,	0,73596,100212,103539,105714,108361,111424,119568,122458,123625,123923,
#Partially deleted in new
chr5	31193768	31251854	chr5:31193768-31251854	0	+	31193768	31193768	8553170	2	118,2641,	0,55445,
#Deleted in new
chr5	31249878	31250987	chr5:31249878-31250987	7	+	31249878	31249878	16724991	1	1109,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	31294198	31302442	chr5:31294198-31302442	0	+	31294198	31294198	8553170	4	58,120,168,332,	0,3090,5265,7912,
#Partially deleted in new
chr5	31316249	31319042	chr5:31316249-31319042	0	+	31316249	31316249	8553170	3	80,118,1370,	0,1125,1423,
#Boundary problem: need 35, got 0, diff 35, mapped 0.0
chr5	31400496	31532061	chr5:31400496-31532061	3	-	31401431	31529059	0	35	1066,47,93,104,83,142,106,158,45,71,103,100,60,61,139,108,108,100,125,170,75,82,72,87,87,81,155,142,232,111,93,834,66,127,72,	0,5180,6356,8559,8753,10249,20775,22290,23930,28978,31079,35268,36742,48050,48784,51036,63739,65685,67442,71566,83057,84384,85994,92710,94789,104058,108124,110538,114491,114957,120626,125582,128543,130301,131493,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr5	31400501	31529106	chr5:31400501-31529106	1	-	31401431	31529059	0	33	1061,47,93,104,83,142,106,158,45,71,103,100,60,61,139,108,108,100,125,170,75,82,72,87,87,81,155,142,232,111,93,834,67,	0,5175,6351,8554,8748,10244,20770,22285,23925,28973,31074,35263,36737,48045,48779,51031,63734,65680,67437,71561,83052,84379,85989,92705,94784,104053,108119,110533,114486,114952,120621,125577,128538,
#Partially deleted in new
chr5	31400501	31529106	chr5:31400501-31529106	1	-	31401431	31529059	0	32	1061,47,93,104,83,142,106,158,45,71,103,100,60,61,139,108,108,100,125,170,75,82,72,87,87,81,155,142,232,93,834,67,	0,5175,6351,8554,8748,10244,20770,22285,23925,28973,31074,35263,36737,48045,48779,51031,63734,65680,67437,71561,83052,84379,85989,92705,94784,104053,108119,110533,114486,120621,125577,128538,
#Partially deleted in new
chr5	31401133	31532109	chr5:31401133-31532109	1	-	31401431	31529059	0	35	429,47,93,104,83,142,106,158,45,71,103,100,60,61,139,108,108,100,125,170,75,82,72,87,87,81,155,142,232,93,834,66,127,76,120,	0,4543,5719,7922,8116,9612,20138,21653,23293,28341,30442,34631,36105,47413,48147,50399,63102,65048,66805,70929,82420,83747,85357,92073,94152,103421,107487,109901,113854,119989,124945,127906,129664,130316,130856,
#Partially deleted in new
chr5	31401146	31406956	chr5:31401146-31406956	0	-	31401146	31401146	8553170	3	416,47,104,	0,4530,5706,
#Partially deleted in new
chr5	31401411	31423321	chr5:31401411-31423321	0	-	31401411	31401411	8553170	8	151,47,93,104,83,142,106,535,	0,4265,5441,7644,7838,9334,19860,21375,
#Partially deleted in new
chr5	31401550	31407050	chr5:31401550-31407050	0	-	31401550	31401550	8553170	3	12,47,198,	0,4126,5302,
#Partially deleted in new
chr5	31408735	31409551	chr5:31408735-31409551	0	-	31408735	31408735	8553170	2	424,302,	0,514,
#Partially deleted in new
chr5	31421323	31437324	chr5:31421323-31437324	0	-	31421323	31421323	8553170	7	54,158,45,71,103,100,86,	0,1463,3103,8151,10252,14441,15915,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	31421750	31429533	chr5:31421750-31429533	0	-	31421750	31421750	8553170	4	117,158,45,59,	0,1036,2676,7724,
#Partially deleted in new
chr5	31449276	31468006	chr5:31449276-31468006	0	-	31449276	31449276	8553170	6	143,108,108,100,25,68,	0,2256,14959,16905,17865,18662,
#Partially deleted in new
chr5	31449368	31466486	chr5:31449368-31466486	0	-	31449368	31449368	8553170	4	51,108,108,305,	0,2164,14867,16813,
#Partially deleted in new
chr5	31464087	31467991	chr5:31464087-31467991	0	-	31464087	31464087	8553170	3	256,100,53,	0,2094,3851,
#Partially deleted in new
chr5	31467458	31484911	chr5:31467458-31484911	0	-	31467458	31467458	8553170	5	154,125,170,75,31,	0,480,4604,16095,17422,
#Partially deleted in new
chr5	31467517	31472233	chr5:31467517-31472233	0	-	31467517	31467517	8553170	2	546,171,	0,4545,
#Partially deleted in new
chr5	31467944	31486733	chr5:31467944-31486733	0	-	31467944	31467944	8553170	6	119,170,75,82,72,61,	0,4118,15609,16936,18546,18728,
#Partially deleted in new
chr5	31472126	31489083	chr5:31472126-31489083	0	-	31472126	31472126	8553170	5	106,75,82,72,102,	0,11427,12754,14364,16855,
#Partially deleted in new
chr5	31493208	31526420	chr5:31493208-31526420	0	-	31493208	31526420	789624	7	85,87,81,155,142,232,342,	0,2077,11346,15412,17826,21779,32870,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	31505683	31505788	chr5:31505683-31505788	3	+	31505683	31505683	8553170	1	105,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	31514993	31526326	chr5:31514993-31526326	0	-	31514993	31526326	789624	3	226,111,248,	0,460,11085,
#Partially deleted in new
chr5	31526328	31532196	chr5:31526328-31532196	0	-	31526328	31529059	789624	4	584,66,127,83,	0,2711,4469,5785,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	31526754	31532074	chr5:31526754-31532074	0	-	31526754	31526754	8553170	6	152,77,66,127,76,85,	0,749,2285,4043,4695,5235,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	31532265	31555058	chr5:31532265-31555058	3	+	31532392	31552902	789624	9	208,146,150,430,63,122,67,140,2286,	0,2006,3478,5994,8683,9015,13380,19027,20507,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	31532286	31554808	chr5:31532286-31554808	0	+	31532392	31538517	789624	9	187,146,150,206,63,122,67,140,2036,	0,1985,3457,6197,8662,8994,13359,19006,20486,
#Partially deleted in new
chr5	31532288	31551394	chr5:31532288-31551394	0	+	31532392	31538517	789624	7	185,146,150,206,122,67,102,	0,1983,3455,6195,8992,13357,19004,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	31532294	31535893	chr5:31532294-31535893	0	+	31532392	31535893	789624	4	179,146,93,150,	0,1977,2664,3449,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	31532294	31534597	chr5:31532294-31534597	0	+	31532294	31532294	8553170	2	179,326,	0,1977,
#Partially deleted in new
chr5	31532294	31538686	chr5:31532294-31538686	0	+	31532294	31532294	8553170	4	179,54,150,427,	0,1977,3449,5965,
#Partially deleted in new
chr5	31532298	31538684	chr5:31532298-31538684	0	+	31532392	31535758	789624	4	175,54,150,204,	0,1973,3445,6182,
#Partially deleted in new
chr5	31532315	31545714	chr5:31532315-31545714	0	+	31532392	31538517	789624	7	158,146,150,206,63,122,69,	0,1956,3428,6168,8633,8965,13330,
#Partially deleted in new
chr5	31538172	31545714	chr5:31538172-31545714	0	+	31538172	31538172	8553170	4	517,63,122,69,	0,2776,3108,7473,
#Deleted in new
chr5	31558572	31559875	chr5:31558572-31559875	3	+	31558572	31558572	8553170	1	1303,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	31595564	31595669	chr5:31595564-31595669	3	-	31595564	31595564	8553170	1	105,	0,
#Partially deleted in new
chr5	31639409	32110931	chr5:31639409-32110931	3	+	31799248	32108135	789624	25	28,836,502,143,133,153,112,146,120,115,74,226,118,133,82,35,157,812,145,4045,118,102,271,135,2963,	0,159479,343745,356166,360729,370920,397821,409129,413201,414359,418245,418468,419829,421592,430159,431974,432751,434422,438052,447721,453497,457869,458954,461695,468559,
#Partially deleted in new
chr5	31657217	31665067	chr5:31657217-31665067	3	+	31657217	31657217	8553170	3	160,152,231,	0,4159,7619,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	31692886	31843975	chr5:31692886-31843975	0	+	31692886	31692886	8553170	3	88,836,688,	0,106002,150401,
#Partially deleted in new
chr5	31712038	31799289	chr5:31712038-31799289	0	+	31799248	31799289	789624	3	53,82,401,	0,75598,86850,
#Deleted in new
chr5	31725538	31725902	chr5:31725538-31725902	7	-	31725538	31725538	16724991	1	364,	0,
#Deleted in new
chr5	31738268	31738660	chr5:31738268-31738660	3	+	31738268	31738268	8553170	1	392,	0,
#Deleted in new
chr5	31741832	31742327	chr5:31741832-31742327	3	-	31741832	31741832	8553170	1	495,	0,
#Deleted in new
chr5	31743987	31744451	chr5:31743987-31744451	3	-	31743987	31743987	8553170	1	464,	0,
#Deleted in new
chr5	31747643	31748078	chr5:31747643-31748078	3	-	31747643	31747643	8553170	1	435,	0,
#Deleted in new
chr5	31754218	31754656	chr5:31754218-31754656	3	+	31754218	31754218	8553170	1	438,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	31820563	31820638	chr5:31820563-31820638	3	-	31820563	31820563	8553170	1	75,	0,
#Deleted in new
chr5	31822560	31823136	chr5:31822560-31823136	7	-	31822560	31822560	16724991	1	576,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	31832438	31832535	chr5:31832438-31832535	3	+	31832438	31832438	8553170	1	97,	0,
#Deleted in new
chr5	31840491	31840971	chr5:31840491-31840971	7	-	31840491	31840491	16724991	1	480,	0,
#Deleted in new
chr5	31847270	31848148	chr5:31847270-31848148	7	+	31847270	31847270	16724991	1	878,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr5	31854936	32077955	chr5:31854936-32077955	0	+	31854936	31854936	8553170	18	232,502,143,133,153,112,146,120,115,74,226,118,133,82,35,157,812,494,	0,128218,140639,145202,155393,182294,193602,197674,198832,202718,202941,204302,206065,214632,216447,217224,218895,222525,
#Partially deleted in new
chr5	31908360	31909186	chr5:31908360-31909186	7	+	31908360	31908360	16724991	2	401,120,	0,706,
#Deleted in new
chr5	31923366	31923532	chr5:31923366-31923532	7	+	31923366	31923366	16724991	1	166,	0,
#Deleted in new
chr5	31936101	31936159	chr5:31936101-31936159	3	-	31936101	31936101	5263520	1	58,	0,
#Partially deleted in new
chr5	31936151	31983541	chr5:31936151-31983541	0	+	31936151	31936151	8553170	2	195,387,	0,47003,
#Partially deleted in new
chr5	32052493	32057949	chr5:32052493-32057949	0	+	32052493	32052493	8553170	4	237,115,74,72,	0,1275,5161,5384,
#Partially deleted in new
chr5	32059331	32072317	chr5:32059331-32072317	0	+	32059331	32059331	8553170	4	25,133,35,157,	0,1670,12052,12829,
#Partially deleted in new
chr5	32077459	32083615	chr5:32077459-32083615	0	+	32077459	32077459	8553170	2	147,202,	0,5954,
#Partially deleted in new
chr5	32098596	32108365	chr5:32098596-32108365	0	+	32098596	32098596	8553170	4	38,102,135,397,	0,2265,2508,9372,
#Partially deleted in new
chr5	32099173	32110926	chr5:32099173-32110926	0	+	32099173	32099173	8553170	3	1790,135,2958,	0,1931,8795,
#Partially deleted in new
chr5	32100866	32108771	chr5:32100866-32108771	0	+	32100866	32100866	8553170	2	97,803,	0,7102,
#Partially deleted in new
chr5	32107320	32108461	chr5:32107320-32108461	0	+	32107320	32107320	8553170	2	140,493,	0,648,
#Partially deleted in new
chr5	32124703	32174350	chr5:32124703-32174350	3	-	32126211	32174034	0	4	1933,115,132,541,	0,10868,19045,49106,
#Partially deleted in new
chr5	32126366	32174302	chr5:32126366-32174302	0	-	32173752	32174034	789624	4	270,115,132,557,	0,9205,17382,47379,
#Partially deleted in new
chr5	32126594	32174317	chr5:32126594-32174317	0	-	32126594	32126594	8553170	3	42,115,508,	0,8977,47215,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	32134737	32134834	chr5:32134737-32134834	3	+	32134737	32134737	8553170	1	97,	0,
#Deleted in new
chr5	32174470	32175272	chr5:32174470-32175272	3	+	32174470	32174470	8553170	1	802,	0,
#Partially deleted in new
chr5	32221931	32222347	chr5:32221931-32222347	7	+	32221931	32221931	16724991	1	416,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr5	32226993	32312938	chr5:32226993-32312938	1	-	32229777	32312838	789624	15	3354,168,173,71,79,125,107,76,130,94,131,73,143,61,181,	0,7968,12007,15063,16527,21008,21778,28699,36119,41707,43823,44839,46986,49688,85764,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr5	32227005	32313009	chr5:32227005-32313009	3	-	32229777	32312838	789624	16	3342,162,168,173,71,79,125,107,76,130,94,131,73,143,61,252,	0,6767,7956,11995,15051,16515,20996,21766,28687,36107,41695,43811,44827,46974,49676,85752,
#Partially deleted in new
chr5	32229607	32312969	chr5:32229607-32312969	1	-	32229777	32312838	789624	14	740,173,71,79,125,107,76,130,94,131,73,143,61,212,	0,9393,12449,13913,18394,19164,26085,33505,39093,41209,42225,44372,47074,83150,
#Partially deleted in new
chr5	32230084	32233893	chr5:32230084-32233893	0	-	32230084	32230084	8553170	3	263,60,121,	0,2876,3688,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	32234765	32234875	chr5:32234765-32234875	3	-	32234765	32234765	8553170	1	110,	0,
#Partially deleted in new
chr5	32243520	32255937	chr5:32243520-32255937	0	-	32243520	32243520	8553170	4	79,125,107,245,	0,4481,5251,12172,
#Partially deleted in new
chr5	32268700	32312987	chr5:32268700-32312987	0	-	32274086	32312838	789624	5	94,131,73,143,230,	0,2116,3132,5279,44057,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	32271832	32312924	chr5:32271832-32312924	0	-	32296431	32312838	789624	5	73,143,61,117,167,	0,2147,4849,24521,40925,
#Partially deleted in new
chr5	32354349	32444761	chr5:32354349-32444761	3	-	32355759	32444658	789624	20	1590,98,112,96,98,142,151,206,163,146,120,197,292,192,248,219,145,283,100,140,	0,9598,9814,24765,25725,31158,33199,34119,35925,40809,42869,45657,48756,49556,52424,60619,63298,65471,89879,90272,
#Partially deleted in new
chr5	32354350	32380424	chr5:32354350-32380424	0	-	32354350	32354350	8553170	4	1589,98,112,1310,	0,9597,9813,24764,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	32354628	32364938	chr5:32354628-32364938	0	-	32354628	32354628	8553170	3	1311,98,775,	0,9319,9535,
#Partially deleted in new
chr5	32354851	32383819	chr5:32354851-32383819	0	-	32354851	32354851	8553170	6	1088,98,112,96,98,59,	0,9096,9312,24263,25223,28909,
#Partially deleted in new
chr5	32355647	32390317	chr5:32355647-32390317	0	-	32379205	32390317	789624	8	292,98,112,96,142,151,206,43,	0,8300,8516,23467,29860,31901,32821,34627,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	32394377	32394475	chr5:32394377-32394475	3	-	32394377	32394377	5263520	1	98,	0,
#Partially deleted in new
chr5	32406726	32444738	chr5:32406726-32444738	0	-	32406726	32406726	8553170	6	295,219,145,283,100,117,	0,8242,10921,13094,37502,37895,
#Partially deleted in new
chr5	32419819	32444496	chr5:32419819-32444496	0	-	32419819	32419819	8553170	2	284,268,	0,24409,
#Partially deleted in new
chr5	32522757	32523865	chr5:32522757-32523865	7	+	32522757	32522757	16724991	1	1108,	0,
#Partially deleted in new
chr5	32531632	32601323	chr5:32531632-32601323	3	+	32588512	32601084	0	5	284,73,123,109,319,	0,56879,59930,67328,69372,
#Partially deleted in new
chr5	32531817	32601200	chr5:32531817-32601200	1	+	32588512	32601084	0	6	99,84,73,123,109,196,	0,39273,56694,59745,67143,69187,
#Partially deleted in new
chr5	32585498	32604079	chr5:32585498-32604079	1	+	32588512	32601084	0	5	127,73,123,109,3075,	0,3013,6064,13462,15506,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	32585558	32601988	chr5:32585558-32601988	0	+	32588512	32594630	789624	6	67,73,123,302,109,984,	0,2953,6004,9012,13402,15446,
#Partially deleted in new
chr5	32585570	32601282	chr5:32585570-32601282	1	+	32588512	32601084	0	6	55,133,73,123,109,278,	0,798,2941,5992,13390,15434,
#Partially deleted in new
chr5	32585587	32601150	chr5:32585587-32601150	1	+	32588512	32601084	0	6	38,73,73,123,109,146,	0,841,2924,5975,13373,15417,
#Partially deleted in new
chr5	32585599	32591687	chr5:32585599-32591687	0	+	32588512	32591687	789624	4	372,10,73,125,	0,892,2912,5963,
#Partially deleted in new
chr5	32585886	32601257	chr5:32585886-32601257	0	+	32585886	32585886	8553170	4	85,123,109,253,	0,5676,13074,15118,
#Partially deleted in new
chr5	32586113	32591685	chr5:32586113-32591685	0	+	32586113	32586113	8553170	3	388,73,123,	0,2398,5449,
#Partially deleted in new
chr5	32588536	32601342	chr5:32588536-32601342	0	+	32588536	32588536	8553170	3	48,123,338,	0,3026,12468,
#Partially deleted in new
chr5	32591247	32601093	chr5:32591247-32601093	0	+	32591247	32591247	8553170	3	438,109,89,	0,7713,9757,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	32594922	32601130	chr5:32594922-32601130	0	+	32594922	32594922	8553170	2	4147,126,	0,6082,
#Partially deleted in new
chr5	32646563	32651976	chr5:32646563-32651976	3	-	32646563	32646563	8553170	2	302,33,	0,5380,
#Partially deleted in new
chr5	32689069	32783028	chr5:32689069-32783028	0	+	32689086	32783028	789624	6	117,123,167,136,95,136,	0,35628,49794,85638,91652,93823,
#Partially deleted in new
chr5	32709406	32786826	chr5:32709406-32786826	1	+	32710662	32786345	789624	8	1377,123,167,136,95,136,88,593,	0,15291,29457,65301,71315,73486,75389,76827,
#Partially deleted in new
chr5	32710636	32791724	chr5:32710636-32791724	1	+	32710662	32786345	0	8	147,123,167,136,95,136,85,5491,	0,14061,28227,64071,70085,72256,74162,75597,
#Partially deleted in new
chr5	32710653	32783607	chr5:32710653-32783607	0	+	32710653	32710653	8553170	6	130,123,167,136,95,715,	0,14044,28210,64054,70068,72239,
#Partially deleted in new
chr5	32711433	32791720	chr5:32711433-32791720	1	+	32711776	32786345	0	8	1112,123,167,136,95,136,88,5487,	0,13264,27430,63274,69288,71459,73362,74800,
#Partially deleted in new
chr5	32711722	32786421	chr5:32711722-32786421	3	+	32711776	32786345	0	8	823,123,167,136,95,136,85,188,	0,12975,27141,62985,68999,71170,73076,74511,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	32712330	32716828	chr5:32712330-32716828	0	+	32712330	32716433	789624	2	215,445,	0,4053,
#Deleted in new
chr5	32887989	32888145	chr5:32887989-32888145	7	-	32887989	32887989	16724991	1	156,	0,
#Partially deleted in new
chr5	32925638	33023327	chr5:32925638-33023327	1	-	32925638	32925638	8553170	2	193,253,	0,97436,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	32947442	32962467	chr5:32947442-32962467	3	+	32947442	32947442	5263520	6	379,158,168,84,119,1100,	0,1500,2673,11171,13698,13925,
#Partially deleted in new
chr5	32948992	32961429	chr5:32948992-32961429	0	+	32948992	32948992	8553170	5	108,137,84,119,62,	0,1154,9621,12148,12375,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	33008993	33025724	chr5:33008993-33025724	3	+	33008993	33008993	8553170	2	273,326,	0,16405,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	33011321	33017607	chr5:33011321-33017607	3	-	33011321	33011321	8553170	3	239,145,41,	0,5629,6245,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	33023054	33297910	chr5:33023054-33297910	3	-	33023054	33023054	8553170	3	273,167,179,	0,240445,274677,
#Partially deleted in new
chr5	33023100	33049401	chr5:33023100-33049401	0	-	33023100	33023100	8553170	2	227,167,	0,26134,
#Deleted in new
chr5	33090125	33090349	chr5:33090125-33090349	7	-	33090125	33090125	16724991	1	224,	0,
#Deleted in new
chr5	33162178	33162807	chr5:33162178-33162807	7	+	33162178	33162178	16724991	1	629,	0,
#Partially deleted in new
chr5	33229734	33255553	chr5:33229734-33255553	3	+	33229734	33229734	789624	4	124,205,110,78,	0,15117,18807,25741,
#Partially deleted in new
chr5	33424024	33440619	chr5:33424024-33440619	3	-	33424024	33424024	8553170	2	122,415,	0,16180,
#Partially deleted in new
chr5	33440695	33467933	chr5:33440695-33467933	1	+	33441086	33467708	0	20	96,98,81,191,124,122,118,65,79,147,99,167,163,138,78,101,105,73,115,374,	0,350,4628,7845,12593,14249,14891,15306,15453,16561,17870,18999,20206,20462,20971,21210,21403,23057,26175,26864,
#Partially deleted in new
chr5	33440738	33453346	chr5:33440738-33453346	0	+	33441086	33453346	789624	5	38,98,81,191,58,	0,307,4585,7802,12550,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr5	33440775	33469539	chr5:33440775-33469539	3	+	33441086	33467708	0	19	368,81,191,124,122,118,65,79,147,99,167,163,138,78,101,105,73,115,1980,	0,4548,7765,12513,14169,14811,15226,15373,16481,17790,18919,20126,20382,20891,21130,21323,22977,26095,26784,
#Partially deleted in new
chr5	33440804	33446197	chr5:33440804-33446197	0	+	33440804	33440804	8553170	3	339,81,132,	0,4519,5261,
#Partially deleted in new
chr5	33440963	33468085	chr5:33440963-33468085	0	+	33441086	33453321	789624	18	180,81,124,122,118,65,79,147,99,167,163,138,78,101,105,73,115,526,	0,4360,12325,13981,14623,15038,15185,16293,17602,18731,19938,20194,20703,20942,21135,22789,25907,26596,
#Partially deleted in new
chr5	33440964	33467838	chr5:33440964-33467838	1	+	33441086	33467708	0	20	179,81,191,99,124,122,118,65,79,147,99,167,163,138,78,101,105,73,115,279,	0,4359,7576,11376,12324,13980,14622,15037,15184,16292,17601,18730,19937,20193,20702,20941,21134,22788,25906,26595,
#Partially deleted in new
chr5	33440976	33468062	chr5:33440976-33468062	0	+	33441086	33455048	789624	18	167,81,191,85,118,65,79,147,99,167,163,138,78,101,105,73,115,503,	0,4347,7564,14005,14610,15025,15172,16280,17589,18718,19925,20181,20690,20929,21122,22776,25894,26583,
#Partially deleted in new
chr5	33440992	33466917	chr5:33440992-33466917	0	+	33441086	33446673	789624	19	151,81,121,191,124,122,118,65,79,147,99,167,163,138,78,101,105,73,47,	0,4331,5651,7548,12296,13952,14594,15009,15156,16264,17573,18702,19909,20165,20674,20913,21106,22760,25878,
#Partially deleted in new
chr5	33440994	33455012	chr5:33440994-33455012	0	+	33441086	33453321	789624	5	149,81,191,119,68,	0,4329,7546,12299,13950,
#Partially deleted in new
chr5	33440995	33453366	chr5:33440995-33453366	0	+	33441086	33446669	789624	5	148,81,158,191,78,	0,4328,5611,7545,12293,
#Partially deleted in new
chr5	33441086	33446669	chr5:33441086-33446669	1	+	33441086	33446669	789624	3	57,81,63,	0,4237,5520,
#Partially deleted in new
chr5	33441086	33453321	chr5:33441086-33453321	1	+	33441086	33453321	789624	3	57,81,33,	0,4237,12202,
#Partially deleted in new
chr5	33441380	33448730	chr5:33441380-33448730	0	+	33448579	33448730	789624	3	484,81,190,	0,3943,7160,
#Partially deleted in new
chr5	33456033	33459969	chr5:33456033-33459969	0	+	33456033	33456033	8553170	5	33,79,147,99,275,	0,115,1223,2532,3661,
#Partially deleted in new
chr5	33461007	33466216	chr5:33461007-33466216	0	+	33461007	33461007	8553170	7	57,138,78,101,105,73,230,	0,150,659,898,1091,2745,4979,
#Deleted in new
chr5	33466757	33468091	chr5:33466757-33468091	0	+	33466757	33466757	8553170	2	228,532,	0,802,
#Deleted in new
chr5	33502071	33503135	chr5:33502071-33503135	7	+	33502071	33502071	16724991	1	1064,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	33519615	33522230	chr5:33519615-33522230	3	-	33519615	33519615	8553170	2	451,466,	0,2149,
#Partially deleted in new
chr5	33523534	33892192	chr5:33523534-33892192	3	-	33527187	33891856	789624	24	3832,160,144,177,153,1107,211,127,139,245,121,134,170,146,93,145,144,150,125,84,197,145,362,463,	0,11298,22524,25672,37492,52519,65064,72399,90703,92293,100696,107245,114042,118275,119843,125287,126019,134649,138381,159483,160324,227869,357584,368195,
#Partially deleted in new
chr5	33527180	33891941	chr5:33527180-33891941	1	-	33527187	33891856	789624	22	186,160,144,177,153,1107,211,127,139,245,170,146,93,145,144,150,125,84,197,145,362,212,	0,7652,18878,22026,33846,48873,61418,68753,87057,88647,110396,114629,116197,121641,122373,131003,134735,155837,156678,224223,353938,364549,
#Partially deleted in new
chr5	33576962	33840312	chr5:33576962-33840312	0	-	33576962	33576962	8553170	18	198,211,127,139,245,121,134,170,146,93,145,144,150,125,84,197,145,169,	0,11636,18971,37275,38865,47268,53817,60614,64847,66415,71859,72591,81221,84953,106055,106896,174441,263181,
#Partially deleted in new
chr5	33603441	33624351	chr5:33603441-33624351	0	-	33603441	33603441	8553170	4	284,139,245,121,	0,10796,12386,20789,
#Partially deleted in new
chr5	33751197	33892019	chr5:33751197-33892019	1	-	33751338	33891856	789624	3	351,362,290,	0,129921,140532,
#Partially deleted in new
chr5	33880863	33891608	chr5:33880863-33891608	0	-	33880863	33880863	8553170	2	617,90,	0,10655,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	33888055	33888162	chr5:33888055-33888162	3	-	33888055	33888055	8553170	1	107,	0,
#Deleted in new
chr5	33936385	33938237	chr5:33936385-33938237	3	+	33936740	33938150	789624	1	1852,	0,
#Partially deleted in new
chr5	33944615	33984730	chr5:33944615-33984730	3	-	33944647	33984583	789624	7	257,212,124,144,326,177,532,	0,2547,6938,9745,19075,37620,39583,
#Partially deleted in new
chr5	33945865	33984641	chr5:33945865-33984641	1	-	33947147	33984583	789624	6	1509,124,144,326,177,443,	0,5688,8495,17825,36370,38333,
#Partially deleted in new
chr5	33947267	33984237	chr5:33947267-33984237	0	-	33947267	33984235	789624	5	107,124,144,326,39,	0,4286,7093,16423,36931,
#Partially deleted in new
chr5	33951404	33984644	chr5:33951404-33984644	1	-	33951651	33984583	789624	4	273,144,177,446,	0,2956,30831,32794,
#Partially deleted in new
chr5	33963641	33984562	chr5:33963641-33984562	0	-	33963641	33963641	8553170	2	375,364,	0,20557,
#Partially deleted in new
chr5	33970862	33972628	chr5:33970862-33972628	7	+	33970862	33970862	16724991	2	560,585,	0,1181,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	33986177	34008108	chr5:33986177-34008108	1	-	33989092	34008019	789624	5	3325,187,161,144,336,	0,12463,18396,19578,21595,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	33987173	34008031	chr5:33987173-34008031	1	-	33989483	34008019	789624	4	2329,187,144,259,	0,11467,18582,20599,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	33987173	34124528	chr5:33987173-34124528	3	-	33998805	34124453	789624	9	2329,187,144,156,100,130,155,112,111,	0,11467,18582,33413,36735,41580,46130,48473,137244,
#Partially deleted in new
chr5	33988083	34008031	chr5:33988083-34008031	0	-	33994008	34008019	789624	5	1419,173,187,144,259,	0,5864,10557,17672,19689,
#Partially deleted in new
chr5	33988083	34008031	chr5:33988083-34008031	0	-	33988083	33988083	8553170	5	1419,43,187,144,259,	0,5994,10557,17672,19689,
#Partially deleted in new
chr5	33988306	34008028	chr5:33988306-34008028	1	-	33988307	34008019	789624	6	55,392,187,161,144,256,	0,804,10334,16267,17449,19466,
#Partially deleted in new
chr5	33988683	34008104	chr5:33988683-34008104	1	-	33989092	34008019	789624	5	819,142,161,144,332,	0,9957,15890,17072,19089,
#Partially deleted in new
chr5	33997006	34008084	chr5:33997006-34008084	1	-	33997390	34008019	789624	5	512,187,161,144,312,	0,1634,7567,8749,10766,
#Deleted in new
chr5	33997043	33997724	chr5:33997043-33997724	7	-	33997043	33997043	16724991	1	681,	0,
#Partially deleted in new
chr5	33997203	34008028	chr5:33997203-34008028	1	-	33997269	34008019	789624	5	110,187,161,144,256,	0,1437,7370,8552,10569,
#Partially deleted in new
chr5	33997243	34008028	chr5:33997243-34008028	3	-	33997250	34008019	789624	4	275,187,144,256,	0,1397,8512,10529,
#Partially deleted in new
chr5	34019447	34043832	chr5:34019447-34043832	1	-	34020582	34043125	789624	6	1295,100,130,155,112,1010,	0,4461,9306,13856,16199,23375,
#Partially deleted in new
chr5	34019452	34043213	chr5:34019452-34043213	3	-	34020582	34043125	789624	6	1290,100,130,155,112,172,	0,4456,9301,13851,16194,23589,
#Partially deleted in new
chr5	34019696	34024418	chr5:34019696-34024418	0	-	34019696	34019696	8553170	2	1046,510,	0,4212,
#Partially deleted in new
chr5	34019704	34029008	chr5:34019704-34029008	0	-	34019704	34019704	8553170	3	1038,100,255,	0,4204,9049,
#Partially deleted in new
chr5	34020667	34033313	chr5:34020667-34033313	0	-	34020667	34020667	8553170	4	75,100,130,116,	0,3241,8086,12530,
#Partially deleted in new
chr5	34033064	34043212	chr5:34033064-34043212	0	-	34033064	34033064	8553170	3	394,112,171,	0,2582,9977,
#Deleted in new
chr5	34105749	34106336	chr5:34105749-34106336	3	-	34105749	34105749	8553170	1	587,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	34124161	34124385	chr5:34124161-34124385	3	-	34124161	34124161	8553170	1	224,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	34158120	34158767	chr5:34158120-34158767	3	+	34158120	34158120	8553170	1	647,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	34164697	34189514	chr5:34164697-34189514	5	-	34164697	34164697	16724991	6	4456,93,136,85,188,43,	0,10747,11124,14315,17982,24774,
#Partially deleted in new
chr5	34175821	34218343	chr5:34175821-34218343	5	-	34175821	34175821	16724991	4	136,85,188,49,	0,3191,6858,42473,
#Deleted in new
chr5	34190055	34193653	chr5:34190055-34193653	7	+	34190055	34190055	16724991	1	3598,	0,
#Deleted in new
chr5	34373027	34373850	chr5:34373027-34373850	7	+	34373027	34373027	16724991	1	823,	0,
#Deleted in new
chr5	34651456	34651888	chr5:34651456-34651888	3	-	34651456	34651456	8553170	1	432,	0,
#Partially deleted in new
chr5	34656236	34832627	chr5:34656236-34832627	3	+	34686919	34830765	789624	18	239,84,131,89,65,58,71,107,179,29,87,87,55,119,1536,150,66,1940,	0,30635,101231,139702,147475,151563,152347,154775,155530,155943,157337,158346,162560,165495,166719,170093,173495,174451,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	34656398	34808622	chr5:34656398-34808622	0	+	34686919	34808622	789624	8	77,117,84,131,89,65,58,39,	0,10864,30473,101069,139540,147313,151401,152185,
#Partially deleted in new
chr5	34656400	34808622	chr5:34656400-34808622	0	+	34686919	34757602	789624	7	75,84,147,89,65,58,39,	0,30471,101067,139538,147311,151399,152183,
#Partially deleted in new
chr5	34656410	34757868	chr5:34656410-34757868	0	+	34656410	34656410	8553170	3	65,84,401,	0,30461,101057,
#Partially deleted in new
chr5	34656411	34657250	chr5:34656411-34657250	3	-	34656411	34656411	8553170	2	259,148,	0,691,
#Partially deleted in new
chr5	34656431	34807857	chr5:34656431-34807857	0	+	34686919	34807857	789624	7	44,77,84,131,89,65,58,	0,2564,30440,101036,139507,147280,151368,
#Partially deleted in new
chr5	34656438	34830765	chr5:34656438-34830765	1	+	34686919	34830765	789624	17	37,84,131,89,65,58,71,107,179,29,87,55,119,1536,150,66,78,	0,30433,101029,139500,147273,151361,152145,154573,155328,155741,158144,162358,165293,166517,169891,173293,174249,
#Partially deleted in new
chr5	34656469	34832611	chr5:34656469-34832611	1	+	34686919	34830765	789624	18	227,84,131,89,65,58,71,107,179,29,87,87,55,119,1536,150,66,1924,	0,30402,100998,139469,147242,151330,152114,154542,155297,155710,157104,158113,162327,165262,166486,169860,173262,174218,
#Partially deleted in new
chr5	34656844	34807857	chr5:34656844-34807857	0	+	34686919	34807857	789624	6	115,84,131,89,65,58,	0,30027,100623,139094,146867,150955,
#Partially deleted in new
chr5	34684506	34821833	chr5:34684506-34821833	0	+	34686919	34795988	789624	15	209,50,84,115,89,65,58,71,107,179,29,87,87,55,102,	0,525,2365,72961,111432,119205,123293,124077,126505,127260,127673,129067,130076,134290,137225,
#Partially deleted in new
chr5	34684517	34830805	chr5:34684517-34830805	1	+	34686919	34830765	789624	19	258,50,84,131,89,65,58,71,107,179,29,87,87,55,119,1536,150,66,118,	0,514,2354,72950,111421,119194,123282,124066,126494,127249,127662,129056,130065,134279,137214,138438,141812,145214,146170,
#Partially deleted in new
chr5	34684526	34733262	chr5:34684526-34733262	0	+	34684526	34684526	8553170	4	189,50,84,147,	0,505,2345,48589,
#Partially deleted in new
chr5	34684535	34807820	chr5:34684535-34807820	0	+	34686919	34807820	789624	6	240,84,131,89,65,21,	0,2336,72932,111403,119176,123264,
#Partially deleted in new
chr5	34684542	34803776	chr5:34684542-34803776	0	+	34686919	34803776	789624	5	173,84,131,89,65,	0,2329,72925,111396,119169,
#Partially deleted in new
chr5	34684551	34803768	chr5:34684551-34803768	0	+	34686919	34803768	789624	6	164,50,84,131,89,57,	0,480,2320,72916,111387,119160,
#Partially deleted in new
chr5	34684553	34830807	chr5:34684553-34830807	1	+	34688203	34830765	789624	20	222,50,84,181,131,89,65,58,71,107,179,29,87,87,55,119,1536,150,66,120,	0,478,2318,3514,72914,111385,119158,123246,124030,126458,127213,127626,129020,130029,134243,137178,138402,141776,145178,146134,
#Partially deleted in new
chr5	34684652	34688283	chr5:34684652-34688283	0	+	34684652	34684652	8553170	3	123,84,216,	0,2219,3415,
#Partially deleted in new
chr5	34685699	34808620	chr5:34685699-34808620	0	+	34686919	34807854	789624	7	115,84,131,89,65,58,37,	0,1172,71768,110239,118012,122100,122884,
#Partially deleted in new
chr5	34685703	34795967	chr5:34685703-34795967	0	+	34686919	34716081	789624	5	111,84,167,131,29,	0,1168,30351,71764,110235,
#Partially deleted in new
chr5	34685732	34808620	chr5:34685732-34808620	0	+	34686919	34757602	789624	7	82,84,147,89,65,58,37,	0,1139,71735,110206,117979,122067,122851,
#Partially deleted in new
chr5	34686384	34808654	chr5:34686384-34808654	0	+	34686919	34808654	789624	7	56,84,131,89,65,58,71,	0,487,71083,109554,117327,121415,122199,
#Partially deleted in new
chr5	34686861	34757598	chr5:34686861-34757598	0	+	34686861	34686861	8553170	2	94,131,	0,70606,
#Partially deleted in new
chr5	34687558	34830785	chr5:34687558-34830785	1	+	34687710	34830765	789624	17	164,131,89,65,58,71,107,179,29,87,87,55,119,1536,150,66,98,	0,69909,108380,116153,120241,121025,123453,124208,124621,126015,127024,131238,134173,135397,138771,142173,143129,
#Partially deleted in new
chr5	34688188	34796026	chr5:34688188-34796026	0	+	34688188	34688188	8553170	3	121,131,88,	0,69279,107750,
#Partially deleted in new
chr5	34716085	34807857	chr5:34716085-34807857	0	+	34716085	34716085	8553170	6	136,90,131,89,65,58,	0,703,41382,79853,87626,91714,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	34728573	34811071	chr5:34728573-34811071	0	+	34728573	34728573	8553170	7	87,147,89,65,58,71,60,	0,28894,67365,75138,79226,80010,82438,
#Partially deleted in new
chr5	34826003	34830918	chr5:34826003-34830918	0	+	34826003	34826003	8553170	3	476,66,231,	0,3728,4684,
#Partially deleted in new
chr5	34826031	34829840	chr5:34826031-34829840	0	+	34826031	34826031	8553170	2	448,109,	0,3700,
#Deleted in new
chr5	34837548	34839278	chr5:34837548-34839278	3	-	34837548	34837548	8553170	2	1469,96,	0,1634,
#Partially deleted in new
chr5	34838832	34863010	chr5:34838832-34863010	0	+	34838832	34838832	8553170	4	116,75,187,113,	0,1832,6654,24065,
#Partially deleted in new
chr5	34839163	34899456	chr5:34839163-34899456	3	+	34840671	34896778	789624	11	96,75,187,124,157,126,178,109,128,106,67,	0,1501,6323,11021,23734,25273,27728,29741,41017,57606,60226,
#Partially deleted in new
chr5	34839163	34863023	chr5:34839163-34863023	0	+	34839163	34839163	8553170	5	33,75,187,124,126,	0,1501,6323,11021,23734,
#Partially deleted in new
chr5	34839165	34869849	chr5:34839165-34869849	0	+	34840671	34862979	789624	5	94,75,157,126,2958,	0,1499,23732,25271,27726,
#Partially deleted in new
chr5	34839213	34845713	chr5:34839213-34845713	0	+	34839213	34839213	8553170	3	46,75,227,	0,1451,6273,
#Partially deleted in new
chr5	34839222	34880308	chr5:34839222-34880308	0	+	34840671	34880308	789624	9	141,75,187,124,157,126,178,109,128,	0,1442,6264,10962,23675,25214,27669,29682,40958,
#Partially deleted in new
chr5	34840671	34896778	chr5:34840671-34896778	0	+	34840671	34880204	789624	8	68,187,124,157,126,178,128,9,	0,4815,9513,22226,23765,26220,39509,56098,
#Partially deleted in new
chr5	34840671	34896851	chr5:34840671-34896851	1	+	34840671	34896851	8553170	10	68,187,124,157,126,178,109,128,83,82,	0,4815,9513,22226,23765,26220,28233,39509,47783,56098,
#Partially deleted in new
chr5	34840671	34880313	chr5:34840671-34880313	1	+	34840671	34880204	789624	7	68,187,124,157,126,178,133,	0,4815,9513,22226,23765,26220,39509,
#Partially deleted in new
chr5	34860782	34861506	chr5:34860782-34861506	7	-	34860782	34860782	16724991	2	193,232,	0,492,
#Deleted in new
chr5	34883056	34883520	chr5:34883056-34883520	7	+	34883056	34883056	16724991	1	464,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	34905263	34916766	chr5:34905263-34916766	3	-	34908764	34914892	0	6	3685,99,259,109,267,1351,	0,3994,6290,8206,9431,10152,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	34908171	34918989	chr5:34908171-34918989	1	-	34908764	34914892	0	9	777,99,259,109,267,211,85,66,468,	0,1086,3382,5298,6523,7244,9880,10060,10350,
#Partially deleted in new
chr5	34908553	34915548	chr5:34908553-34915548	0	-	34911803	34914892	0	5	395,99,259,267,133,	0,704,3000,6141,6862,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	34908654	34915615	chr5:34908654-34915615	0	-	34913969	34914892	789624	7	294,99,259,109,100,267,200,	0,603,2899,4815,5272,6040,6761,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	34911617	34915517	chr5:34911617-34915517	0	-	34913969	34914892	789624	4	195,100,267,102,	0,2309,3077,3798,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	34913870	34914801	chr5:34913870-34914801	0	-	34913870	34913870	8553170	2	156,107,	0,824,
#Deleted in new
chr5	34913969	34916769	chr5:34913969-34916769	1	-	34913969	34914892	789624	3	57,267,1354,	0,725,1446,
#Deleted in new
chr5	34914476	34915504	chr5:34914476-34915504	0	-	34914476	34914476	8553170	2	485,89,	0,939,
#Partially deleted in new
chr5	34915375	34925996	chr5:34915375-34925996	3	+	34915738	34925495	789624	10	522,112,44,71,50,74,51,102,129,771,	0,2988,4464,6841,7163,7319,7625,7757,9471,9850,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	34915676	34923357	chr5:34915676-34923357	0	+	34915676	34915676	8553170	6	221,112,44,71,50,663,	0,2687,4163,6540,6862,7018,
#Partially deleted in new
chr5	34915709	34925680	chr5:34915709-34925680	0	+	34915709	34915709	8553170	5	188,112,44,1018,834,	0,2654,4130,6507,9137,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	34915715	34921925	chr5:34915715-34921925	0	+	34915715	34915715	8553170	3	182,112,2086,	0,2648,4124,
#Partially deleted in new
chr5	34915751	34925345	chr5:34915751-34925345	0	+	34915751	34915751	8553170	8	146,71,50,74,51,102,129,120,	0,6465,6787,6943,7249,7381,9095,9474,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	34929558	34958964	chr5:34929558-34958964	3	+	34929819	34954714	789624	12	358,94,124,123,305,152,88,159,43,173,76,4412,	0,4256,6151,6585,7767,9299,11537,15308,16202,20611,24367,24994,
#Partially deleted in new
chr5	34929592	34955200	chr5:34929592-34955200	1	+	34929819	34954714	789624	12	324,94,124,123,305,152,88,159,43,173,76,648,	0,4222,6117,6551,7733,9265,11503,15274,16168,20577,24333,24960,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	34929592	34958964	chr5:34929592-34958964	1	+	34929819	34954714	789624	13	324,94,124,123,305,152,88,159,43,135,173,76,4412,	0,4222,6117,6551,7733,9265,11503,15274,16168,19950,20577,24333,24960,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	34929819	34955867	chr5:34929819-34955867	1	+	34929819	34954714	789624	12	97,94,124,123,305,152,88,159,82,173,76,1315,	0,3995,5890,6324,7506,9038,11276,15047,15902,20350,24106,24733,
#Partially deleted in new
chr5	34929976	34955168	chr5:34929976-34955168	1	+	34936176	34954714	789624	12	385,94,124,123,305,152,88,159,43,173,76,616,	0,3838,5733,6167,7349,8881,11119,14890,15784,20193,23949,24576,
#Partially deleted in new
chr5	34929990	34950257	chr5:34929990-34950257	0	+	34936176	34950257	789624	11	371,94,124,123,305,152,88,159,43,135,88,	0,3824,5719,6153,7335,8867,11105,14876,15770,19552,20179,
#Partially deleted in new
chr5	34930062	34955018	chr5:34930062-34955018	1	+	34936176	34954714	789624	13	299,94,124,123,305,152,88,159,82,135,173,76,466,	0,3752,5647,6081,7263,8795,11033,14804,15659,19480,20107,23863,24490,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	34930070	34955878	chr5:34930070-34955878	0	+	34936176	34937509	789624	12	291,94,124,123,301,152,88,159,82,173,76,1326,	0,3744,5639,6073,7259,8787,11025,14796,15651,20099,23855,24482,
#Partially deleted in new
chr5	34936203	34950342	chr5:34936203-34950342	0	+	34936203	34936203	8553170	7	63,305,152,88,159,82,173,	0,1122,2654,4892,8663,9518,13966,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	34945760	34952743	chr5:34945760-34952743	0	+	34945760	34945760	8553170	3	43,173,2300,	0,4409,4683,
#Partially deleted in new
chr5	34950206	34954191	chr5:34950206-34954191	0	+	34950206	34950206	8553170	2	136,266,	0,3719,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	34953525	34954855	chr5:34953525-34954855	0	+	34953525	34953525	8553170	2	476,303,	0,1027,
#Partially deleted in new
chr5	34998100	35048093	chr5:34998100-35048093	3	-	34998718	35047892	789624	14	726,99,150,92,133,93,101,94,94,95,124,185,89,289,	0,5662,11899,14853,15886,27662,28309,34631,35359,37121,38841,41223,42474,49704,
#Partially deleted in new
chr5	34998100	35048135	chr5:34998100-35048135	1	-	34998718	35047892	789624	12	726,99,150,93,101,94,94,95,124,185,89,331,	0,5662,11899,27662,28309,34631,35359,37121,38841,41223,42474,49704,
#Partially deleted in new
chr5	34998102	35026395	chr5:34998102-35026395	0	-	34998102	34998102	8553170	6	724,99,150,92,133,633,	0,5660,11897,14851,15884,27660,
#Partially deleted in new
chr5	34998249	35047935	chr5:34998249-35047935	1	-	34998718	35047892	789624	13	153,153,99,150,93,101,94,94,95,124,185,89,131,	0,424,5513,11750,27513,28160,34482,35210,36972,38692,41074,42325,49555,
#Partially deleted in new
chr5	35012396	35025833	chr5:35012396-35025833	0	-	35012396	35012396	8553170	3	649,133,71,	0,1590,13366,
#Partially deleted in new
chr5	35033010	35047890	chr5:35033010-35047890	0	-	35033010	35033010	8553170	5	543,95,124,185,86,	0,2211,3931,6313,14794,
#Partially deleted in new
chr5	35048755	35089637	chr5:35048755-35089637	1	-	35049286	35089620	0	9	653,154,70,100,142,170,170,133,87,	0,17193,19460,20023,21368,23819,35714,37452,40795,
#Partially deleted in new
chr5	35048755	35089637	chr5:35048755-35089637	1	-	35049396	35089620	0	8	653,70,100,142,170,170,133,87,	0,19460,20023,21368,23819,35714,37452,40795,
#Partially deleted in new
chr5	35048758	35118122	chr5:35048758-35118122	1	-	35049396	35089620	0	9	650,70,100,142,170,170,133,113,62,	0,19457,20020,21365,23816,35711,37449,40792,69302,
#Partially deleted in new
chr5	35048758	35118122	chr5:35048758-35118122	1	-	35049286	35089620	0	7	650,142,170,170,133,113,62,	0,21365,23816,35711,37449,40792,69302,
#Partially deleted in new
chr5	35048758	35118122	chr5:35048758-35118122	1	-	35049286	35089620	0	10	650,154,70,100,142,170,170,133,113,62,	0,17190,19457,20020,21365,23816,35711,37449,40792,69302,
#Partially deleted in new
chr5	35048771	35089637	chr5:35048771-35089637	1	-	35049286	35089620	0	6	637,142,170,170,133,87,	0,21352,23803,35698,37436,40779,
#Partially deleted in new
chr5	35048771	35089637	chr5:35048771-35089637	0	-	35084604	35089620	789624	5	637,142,170,170,87,	0,21352,23803,35698,40779,
#Partially deleted in new
chr5	35048771	35089637	chr5:35048771-35089637	0	-	35084604	35089620	789624	7	637,70,100,142,170,170,87,	0,19444,20007,21352,23803,35698,40779,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	35055696	35230589	chr5:35055696-35230589	3	-	35065088	35089620	0	10	10406,70,100,142,170,170,133,113,62,322,	0,12519,13082,14427,16878,28773,30511,33854,62364,174571,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	35055696	35118122	chr5:35055696-35118122	1	-	35065088	35089620	0	7	10406,70,100,142,170,113,62,	0,12519,13082,14427,16878,33854,62364,
#Partially deleted in new
chr5	35064797	35230409	chr5:35064797-35230409	0	-	35070233	35089620	789624	7	1305,70,100,142,113,62,142,	0,3418,3981,5326,24753,53263,165470,
#Partially deleted in new
chr5	35065088	35089620	chr5:35065088-35089620	1	-	35065335	35089620	0	9	288,154,70,100,142,170,170,133,70,	0,860,3127,3690,5035,7486,19381,21119,24462,
#Partially deleted in new
chr5	35065088	35089620	chr5:35065088-35089620	1	-	35065088	35089620	0	6	1014,70,100,142,170,70,	0,3127,3690,5035,7486,24462,
#Partially deleted in new
chr5	35065088	35118122	chr5:35065088-35118122	1	-	35065335	35089620	0	10	288,154,70,100,142,170,170,133,113,62,	0,860,3127,3690,5035,7486,19381,21119,24462,52972,
#Partially deleted in new
chr5	35068229	35086338	chr5:35068229-35086338	0	-	35068229	35068229	8553170	5	56,142,170,170,131,	0,1894,4345,16240,17978,
#Deleted in new
chr5	35081222	35081992	chr5:35081222-35081992	7	+	35081222	35081222	16724991	2	283,173,	0,597,
#Partially deleted in new
chr5	35084481	35130344	chr5:35084481-35130344	0	-	35084481	35089620	789624	5	158,133,113,62,122,	0,1726,5069,33579,45741,
#Partially deleted in new
chr5	35084508	35195242	chr5:35084508-35195242	0	-	35084508	35089620	789624	5	131,133,113,62,140,	0,1699,5042,33552,110594,
#Partially deleted in new
chr5	35084534	35135451	chr5:35084534-35135451	0	-	35084534	35089620	789624	5	105,133,113,62,155,	0,1673,5016,33526,50762,
#Partially deleted in new
chr5	35086224	35230372	chr5:35086224-35230372	0	-	35086224	35089620	789624	5	116,113,62,187,105,	0,3326,31836,66562,144043,
#Partially deleted in new
chr5	35086307	35230477	chr5:35086307-35230477	0	-	35086307	35089620	789624	5	33,113,62,163,210,	0,3243,31753,109243,143960,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	35429063	35429277	chr5:35429063-35429277	3	+	35429063	35429063	8553170	1	214,	0,
#Partially deleted in new
chr5	35617843	35671575	chr5:35617843-35671575	1	+	35617997	35670248	789624	10	212,103,253,171,141,65,187,189,188,1517,	0,10616,23587,26511,28823,31517,36696,41175,49228,52215,
#Partially deleted in new
chr5	35617843	35814611	chr5:35617843-35814611	3	+	35617997	35814553	789624	37	212,103,253,171,141,65,187,189,188,169,220,155,76,62,104,257,109,158,174,75,149,128,139,138,152,181,148,129,139,230,107,183,93,180,246,123,148,	0,10616,23587,26511,28823,31517,36696,41175,49228,52215,73193,74726,76444,77891,79846,82652,86710,87807,91104,94968,109831,122075,122285,135780,141724,145678,153765,156049,158413,161273,174496,175315,177859,182124,188863,189287,196620,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr5	35617843	35710850	chr5:35617843-35710850	1	+	35617997	35709129	789624	19	212,103,253,171,141,65,187,189,188,169,220,155,61,62,104,257,109,158,1903,	0,10616,23587,26511,28823,31517,36696,41175,49228,52215,73193,74726,76444,77891,79846,82652,86710,87807,91104,
#Partially deleted in new
chr5	35617843	35791056	chr5:35617843-35791056	1	+	35617997	35790370	789624	35	212,103,253,171,141,65,187,189,188,169,220,155,76,62,104,257,109,158,174,75,149,128,139,138,152,181,148,129,139,230,1166,218,209,124,1032,	0,10616,23587,26511,28823,31517,36696,41175,49228,52215,73193,74726,76444,77891,79846,82652,86710,87807,91104,94968,109831,122075,122285,135780,141724,145678,153765,156049,158413,161273,170022,171314,171653,171957,172181,
#Partially deleted in new
chr5	35617888	35643652	chr5:35617888-35643652	0	+	35617888	35617888	8553170	4	167,103,253,148,	0,10571,23542,25616,
#Partially deleted in new
chr5	35617900	35641755	chr5:35617900-35641755	0	+	35617900	35617900	8553170	3	155,103,325,	0,10559,23530,
#Partially deleted in new
chr5	35617919	35654641	chr5:35617919-35654641	0	+	35617997	35654641	789624	6	136,103,253,141,65,102,	0,10540,23511,28747,31441,36620,
#Partially deleted in new
chr5	35617997	35808238	chr5:35617997-35808238	1	+	35617997	35807731	789624	37	58,103,253,171,141,65,187,189,188,169,220,155,61,62,104,257,109,158,174,75,149,128,139,138,152,181,148,129,139,230,107,183,93,180,246,123,600,	0,10462,23433,26357,28669,31363,36542,41021,49074,52061,73039,74572,76290,77737,79692,82498,86556,87653,90950,94814,109677,121921,122131,135626,141570,145524,153611,155895,158259,161119,174342,175161,177705,181970,188709,189133,189641,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	35632962	35633024	chr5:35632962-35633024	3	-	35632962	35632962	8553170	1	62,	0,
#Partially deleted in new
chr5	35646530	35654659	chr5:35646530-35654659	0	+	35646530	35646530	8553170	3	277,65,120,	0,2830,8009,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	35659049	35710850	chr5:35659049-35710850	0	+	35659049	35659049	8553170	11	158,188,169,220,155,61,62,3063,109,158,1903,	0,8022,11009,31987,33520,35238,36685,38640,45504,46601,49898,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	35675601	35705791	chr5:35675601-35705791	0	+	35675601	35675601	8553170	9	391,220,155,61,62,104,257,109,141,	0,15435,16968,18686,20133,22088,24894,28952,30049,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	35678483	35827018	chr5:35678483-35827018	3	-	35678483	35678483	8553170	4	226,63,78,173,	0,5496,19474,148362,
#Partially deleted in new
chr5	35700622	35705791	chr5:35700622-35705791	0	+	35700622	35704604	789624	4	130,167,109,141,	0,1530,3931,5028,
#Partially deleted in new
chr5	35771735	35814532	chr5:35771735-35814532	0	+	35771735	35791512	789624	12	21,129,139,230,68,107,183,93,180,246,123,69,	0,2157,4521,7381,19772,20604,21423,23967,28232,34971,35395,42728,
#Partially deleted in new
chr5	35773991	35814611	chr5:35773991-35814611	0	+	35773991	35788156	789624	15	30,139,230,931,218,209,124,185,107,183,93,180,246,123,148,	0,2265,5125,14109,15166,15505,15809,16033,18348,19167,21711,25976,32715,33139,40472,
#Partially deleted in new
chr5	35779167	35814611	chr5:35779167-35814611	0	+	35779167	35789177	789624	13	179,147,218,209,124,185,107,183,93,180,246,123,148,	0,9717,9990,10329,10633,10857,13172,13991,16535,20800,27539,27963,35296,
#Partially deleted in new
chr5	35781319	35790450	chr5:35781319-35790450	0	+	35781319	35781319	8553170	6	349,147,218,209,124,426,	0,7565,7838,8177,8481,8705,
#Partially deleted in new
chr5	35852694	35860948	chr5:35852694-35860948	0	+	35856977	35860948	789624	4	244,138,83,97,	0,3337,4282,8157,
#Partially deleted in new
chr5	35852722	35867465	chr5:35852722-35867465	0	+	35852722	35852722	8553170	3	216,139,160,	0,8129,14583,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	35856294	35860926	chr5:35856294-35860926	0	+	35856977	35860926	789624	3	393,83,75,	0,682,4557,
#Partially deleted in new
chr5	35856848	35879603	chr5:35856848-35879603	3	+	35856977	35876486	789624	8	211,139,158,158,169,94,76,3621,	0,4003,10457,14207,16631,17600,18663,19134,
#Partially deleted in new
chr5	35856888	35876567	chr5:35856888-35876567	0	+	35856977	35875517	789624	6	171,139,158,158,76,585,	0,3963,10417,14167,18623,19094,
#Partially deleted in new
chr5	35856890	35875722	chr5:35856890-35875722	1	+	35856977	35875591	789624	6	169,139,158,158,169,211,	0,3961,10415,14165,16589,18621,
#Partially deleted in new
chr5	35856891	35867610	chr5:35856891-35867610	1	+	35856977	35867537	789624	3	168,139,305,	0,3960,10414,
#Deleted in new
chr5	35873200	35875521	chr5:35873200-35875521	0	+	35873200	35873200	8553170	3	448,94,10,	0,1248,2311,
#Deleted in new
chr5	35873533	35876708	chr5:35873533-35876708	0	+	35873533	35875989	789624	3	115,76,726,	0,1978,2449,
#Deleted in new
chr5	35875413	35876434	chr5:35875413-35876434	0	+	35875413	35875413	8553170	2	174,452,	0,569,
#Deleted in new
chr5	35895688	35896020	chr5:35895688-35896020	3	-	35895688	35895688	8553170	1	332,	0,
#Deleted in new
chr5	35896187	35896290	chr5:35896187-35896290	7	-	35896187	35896187	16724991	1	103,	0,
#Partially deleted in new
chr5	35904294	35938779	chr5:35904294-35938779	3	-	35904544	35921120	789624	5	352,210,178,137,127,	0,5571,6071,16689,34358,
#Partially deleted in new
chr5	35904297	35938635	chr5:35904297-35938635	1	-	35904544	35921120	789624	5	349,210,178,137,95,	0,5568,6068,16686,34243,
#Partially deleted in new
chr5	35904601	35938635	chr5:35904601-35938635	0	-	35904601	35921120	789624	5	45,210,178,137,95,	0,5264,5764,16382,33939,
#Partially deleted in new
chr5	35909829	35938635	chr5:35909829-35938635	1	-	35909847	35921120	789624	4	246,178,137,95,	0,536,11154,28711,
#Deleted in new
chr5	35938821	35939993	chr5:35938821-35939993	3	+	35938821	35938821	789624	2	103,271,	0,901,
#Partially deleted in new
chr5	35951009	35991598	chr5:35951009-35991598	3	-	35954201	35991240	789624	7	3469,220,232,532,115,102,452,	0,4635,6178,14376,17009,37440,40137,
#Partially deleted in new
chr5	35955194	35991397	chr5:35955194-35991397	1	-	35955628	35991240	789624	6	670,232,532,115,102,251,	0,1993,10191,12824,33255,35952,
#Partially deleted in new
chr5	35955380	35991433	chr5:35955380-35991433	1	-	35955628	35991240	789624	5	484,232,532,115,287,	0,1807,10005,12638,35766,
#Partially deleted in new
chr5	35955728	35991334	chr5:35955728-35991334	0	-	35955728	35955728	8553170	3	136,232,188,	0,1459,35418,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	35960755	36001028	chr5:35960755-36001028	1	-	35962873	35988483	789624	6	2196,532,115,102,91,61,	0,4630,7263,27694,36483,40212,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	35962873	35991433	chr5:35962873-35991433	1	-	35962873	35988483	789624	5	78,532,115,102,287,	0,2512,5145,25576,28273,
#Partially deleted in new
chr5	36035016	36066891	chr5:36035016-36066891	3	-	36035697	36066789	789624	7	958,220,232,532,115,102,196,	0,2780,4460,13872,16853,29232,31679,
#Partially deleted in new
chr5	36035336	36066882	chr5:36035336-36066882	1	-	36035697	36066789	789624	6	638,220,232,532,115,187,	0,2460,4140,13552,16533,31359,
#Partially deleted in new
chr5	36035354	36066882	chr5:36035354-36066882	0	-	36039656	36066789	789624	6	620,220,232,115,102,187,	0,2442,4122,16515,28894,31341,
#Partially deleted in new
chr5	36039659	36071358	chr5:36039659-36071358	0	-	36039659	36039659	8553170	4	49,115,102,277,	0,12210,24589,31422,
#Partially deleted in new
chr5	36049316	36067284	chr5:36049316-36067284	0	-	36049316	36066789	789624	5	104,115,102,189,62,	0,2553,14932,17379,17906,
#Deleted in new
chr5	36071790	36072079	chr5:36071790-36072079	7	-	36071790	36071790	16724991	1	289,	0,
#Partially deleted in new
chr5	36098411	36151961	chr5:36098411-36151961	3	-	36104045	36143349	789624	18	5695,130,106,47,104,98,106,134,182,184,114,75,211,168,96,98,231,406,	0,6656,10122,11533,12743,16012,16603,18048,19323,23868,24436,25779,37897,38862,42695,44090,44764,53144,
#Partially deleted in new
chr5	36108521	36115054	chr5:36108521-36115054	0	-	36108521	36108521	8553170	5	118,47,104,61,40,	0,1423,2633,5902,6493,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	36141040	36142757	chr5:36141040-36142757	0	-	36141040	36141040	8553170	2	162,256,	0,1461,
#Deleted in new
chr5	36147891	36147988	chr5:36147891-36147988	3	-	36147891	36147891	5263520	1	97,	0,
#Partially deleted in new
chr5	36151988	36184041	chr5:36151988-36184041	1	+	36152262	36184011	0	10	282,272,112,144,135,99,131,52,108,202,	0,782,11656,14530,16324,18355,19614,24976,25196,31851,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	36152042	36184038	chr5:36152042-36184038	1	+	36166633	36182031	0	8	228,272,144,99,131,52,108,2221,	0,728,14476,18301,19560,24922,25142,29775,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	36152066	36184319	chr5:36152066-36184319	3	+	36152262	36182031	0	10	204,272,112,144,135,99,131,52,108,2502,	0,704,11578,14452,16246,18277,19536,24898,25118,29751,
#Partially deleted in new
chr5	36152086	36182172	chr5:36152086-36182172	1	+	36152226	36182031	789624	11	152,29,272,112,144,135,99,131,52,108,355,	0,155,684,11558,14432,16226,18257,19516,24878,25098,29731,
#Partially deleted in new
chr5	36152121	36182057	chr5:36152121-36182057	1	+	36152262	36182031	789624	5	149,272,52,108,240,	0,649,24843,25063,29696,
#Partially deleted in new
chr5	36152127	36182514	chr5:36152127-36182514	0	+	36152262	36166547	789624	8	143,272,144,99,131,52,108,697,	0,643,14391,18216,19475,24837,25057,29690,
#Partially deleted in new
chr5	36152127	36171733	chr5:36152127-36171733	0	+	36152262	36171733	789624	6	143,272,112,144,99,131,	0,643,11517,14391,18216,19475,
#Partially deleted in new
chr5	36152168	36170384	chr5:36152168-36170384	0	+	36152262	36166547	789624	5	102,272,144,135,41,	0,602,14350,16144,18175,
#Partially deleted in new
chr5	36152930	36184029	chr5:36152930-36184029	0	+	36152930	36176983	789624	5	112,112,52,108,190,	0,10714,24034,24254,30909,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	36155118	36155222	chr5:36155118-36155222	3	+	36155118	36155118	8553170	1	104,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	36192591	36241391	chr5:36192591-36241391	1	-	36195143	36225612	789624	12	2691,124,54,56,96,79,137,84,82,89,89,33,	0,4949,7635,8514,14578,19252,25156,27004,32950,33883,34885,48767,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	36192884	36218257	chr5:36192884-36218257	0	-	36192884	36192884	8553170	7	2398,124,54,56,96,79,510,	0,4656,7342,8221,14285,18959,24863,
#Partially deleted in new
chr5	36193712	36242142	chr5:36193712-36242142	1	-	36195143	36225612	789624	12	1570,124,54,56,96,79,137,84,82,89,89,47,	0,3828,6514,7393,13457,18131,24035,25883,31829,32762,33764,48383,
#Partially deleted in new
chr5	36194229	36241798	chr5:36194229-36241798	3	-	36195143	36241798	789624	12	1053,124,54,56,96,79,137,84,82,89,89,300,	0,3311,5997,6876,12940,17614,23518,25366,31312,32245,33247,47269,
#Partially deleted in new
chr5	36194821	36213177	chr5:36194821-36213177	0	-	36194821	36194821	8553170	7	461,124,54,56,96,79,165,	0,2719,5405,6284,12348,17022,18191,
#Partially deleted in new
chr5	36194985	36242279	chr5:36194985-36242279	1	-	36195143	36225612	789624	13	297,124,54,56,96,66,79,137,84,82,89,89,184,	0,2555,5241,6120,12184,13639,16858,22762,24610,30556,31489,32491,47110,
#Partially deleted in new
chr5	36194987	36207263	chr5:36194987-36207263	0	-	36195143	36207263	789624	4	295,124,56,94,	0,2553,6118,12182,
#Partially deleted in new
chr5	36195061	36213113	chr5:36195061-36213113	0	-	36195061	36195061	8553170	8	221,124,54,56,96,79,50,101,	0,2479,5165,6044,12108,16782,17202,17951,
#Partially deleted in new
chr5	36195143	36241798	chr5:36195143-36241798	1	-	36195143	36241798	789624	11	139,124,54,56,79,137,84,82,89,89,300,	0,2397,5083,5962,16700,22604,24452,30398,31331,32333,46355,
#Partially deleted in new
chr5	36195143	36225612	chr5:36195143-36225612	1	-	36195143	36225612	789624	8	139,124,54,56,79,137,84,71,	0,2397,5083,5962,16700,22604,24452,30398,
#Partially deleted in new
chr5	36217793	36242106	chr5:36217793-36242106	0	-	36217793	36225612	789624	6	91,84,82,89,89,144,	0,1802,7748,8681,9683,24169,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	36221054	36221902	chr5:36221054-36221902	3	+	36221054	36221054	8553170	2	355,365,	0,483,
#Partially deleted in new
chr5	36248433	36301902	chr5:36248433-36301902	3	-	36249653	36301416	789624	14	1264,187,143,121,131,103,85,104,140,72,78,40,59,577,	0,2879,5213,7036,8507,9020,12346,13505,16525,17015,20956,21517,22819,52892,
#Partially deleted in new
chr5	36249332	36301900	chr5:36249332-36301900	1	-	36249653	36301416	789624	15	365,187,143,121,131,103,85,104,140,72,75,78,40,59,575,	0,1980,4314,6137,7608,8121,11447,12606,15626,16116,18860,20057,20618,21920,51993,
#Partially deleted in new
chr5	36256795	36301900	chr5:36256795-36301900	1	-	36256877	36301416	789624	10	276,103,85,104,140,72,78,40,59,575,	0,658,3984,5143,8163,8653,12594,13155,14457,44530,
#Partially deleted in new
chr5	36265462	36302114	chr5:36265462-36302114	0	-	36265462	36301416	789624	6	58,78,40,59,298,39,	0,3927,4488,5790,35863,36613,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	36485342	36485440	chr5:36485342-36485440	7	+	36485342	36485342	16724991	1	98,	0,
#Deleted in new
chr5	36588505	36588661	chr5:36588505-36588661	7	+	36588505	36588505	16724991	1	156,	0,
#Partially deleted in new
chr5	36606354	36688334	chr5:36606354-36688334	3	+	36608423	36686269	0	10	381,276,138,205,43,293,234,195,135,2270,	0,1974,23095,64674,67694,70537,73272,74040,77509,79710,
#Partially deleted in new
chr5	36606354	36688332	chr5:36606354-36688332	1	+	36608423	36686269	789624	8	381,276,138,205,234,195,135,2268,	0,1974,23095,64674,73272,74040,77509,79710,
#Partially deleted in new
chr5	36606354	36688332	chr5:36606354-36688332	1	+	36608423	36686269	789624	9	381,276,205,43,293,234,195,135,2268,	0,1974,64674,67694,70537,73272,74040,77509,79710,
#Partially deleted in new
chr5	36606438	36629572	chr5:36606438-36629572	0	+	36608423	36629572	789624	4	297,88,276,123,	0,785,1890,23011,
#Deleted in new
chr5	36606610	36608698	chr5:36606610-36608698	0	+	36606610	36606610	8553170	3	125,88,370,	0,613,1718,
#Deleted in new
chr5	36606610	36609299	chr5:36606610-36609299	0	+	36606610	36606610	8553170	2	125,971,	0,1718,
#Partially deleted in new
chr5	36606616	36612908	chr5:36606616-36612908	0	+	36606616	36606616	8553170	3	119,276,163,	0,1712,6129,
#Partially deleted in new
chr5	36606616	36613487	chr5:36606616-36613487	0	+	36606616	36606616	8553170	3	119,276,742,	0,1712,6129,
#Partially deleted in new
chr5	36606889	36629588	chr5:36606889-36629588	0	+	36608423	36629588	789624	3	125,276,139,	0,1439,22560,
#Partially deleted in new
chr5	36608177	36629588	chr5:36608177-36629588	0	+	36608423	36629588	789624	2	427,139,	0,21272,
#Partially deleted in new
chr5	36608328	36688332	chr5:36608328-36688332	1	+	36608423	36686269	0	8	276,138,205,43,293,234,195,2268,	0,21121,62700,65720,68563,71298,72066,77736,
#Partially deleted in new
chr5	36608489	36630473	chr5:36608489-36630473	0	+	36608489	36608489	8553170	4	115,138,102,59,	0,20960,21453,21925,
#Partially deleted in new
chr5	36612809	36671184	chr5:36612809-36671184	0	+	36612809	36612809	8553170	3	246,138,156,	0,16640,58219,
#Partially deleted in new
chr5	36613098	36671234	chr5:36613098-36671234	0	+	36613098	36613098	8553170	3	201,138,206,	0,16351,57930,
#Partially deleted in new
chr5	36666213	36725173	chr5:36666213-36725173	3	-	36666213	36666213	8553170	3	271,147,60,	0,2351,58900,
#Deleted in new
chr5	36667716	36669958	chr5:36667716-36669958	3	+	36667716	36667716	8553170	1	2242,	0,
#Deleted in new
chr5	36670820	36677127	chr5:36670820-36677127	0	+	36670820	36670820	8553170	4	83,205,43,236,	0,208,3228,6071,
#Partially deleted in new
chr5	36680346	36686233	chr5:36680346-36686233	0	+	36680346	36680346	8553170	3	243,135,169,	0,3517,5718,
#Partially deleted in new
chr5	36702477	36725176	chr5:36702477-36725176	1	-	36702477	36702477	8553170	3	487,131,63,	0,3243,22636,
#Partially deleted in new
chr5	36702629	36725195	chr5:36702629-36725195	1	-	36702629	36702629	8553170	3	335,172,82,	0,3050,22484,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	36861735	36867238	chr5:36861735-36867238	3	-	36861735	36861735	8553170	2	1169,1068,	0,4435,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	36864424	36876657	chr5:36864424-36876657	2	-	36864424	36864424	8553170	2	1602,987,	0,11246,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	36871363	36876700	chr5:36871363-36876700	1	-	36871363	36871363	789624	1	5337,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	36871918	36876207	chr5:36871918-36876207	0	-	36871918	36871918	8553170	2	724,537,	0,3752,
#Partially deleted in new
chr5	36876758	37066413	chr5:36876758-37066413	3	+	36953696	37064892	789624	47	420,143,166,128,100,152,161,97,627,1626,183,198,72,90,104,87,232,152,81,101,139,83,133,144,90,215,103,99,147,135,99,54,109,137,141,94,155,91,174,191,108,201,147,275,175,189,1887,	0,76859,78713,81345,84725,85364,94117,95186,99017,107917,118863,123614,124058,124230,125903,126502,129598,130564,131249,131864,133328,137924,139279,140260,142552,143700,144016,145292,145485,147826,149470,150600,159620,161843,167588,167877,168684,169350,171743,172352,175020,175607,180427,182132,184085,187031,187768,
#Partially deleted in new
chr5	36876789	37064190	chr5:36876789-37064190	1	+	36953696	37064023	789624	46	389,143,166,128,100,152,161,97,627,1626,183,198,72,90,104,87,232,152,81,101,139,83,133,144,90,215,103,99,147,135,99,54,109,137,141,94,155,91,174,191,108,201,147,275,175,401,	0,76828,78682,81314,84694,85333,94086,95155,98986,107886,118832,123583,124027,124199,125872,126471,129567,130533,131218,131833,133297,137893,139248,140229,142521,143669,143985,145261,145454,147795,149439,150569,159589,161812,167557,167846,168653,169319,171712,172321,174989,175576,180396,182101,184054,187000,
#Deleted in new
chr5	36885205	36886497	chr5:36885205-36886497	7	+	36885205	36885205	16724991	1	1292,	0,
#Partially deleted in new
chr5	36954967	36975897	chr5:36954967-36975897	0	+	36954967	36954967	8553170	8	43,166,128,100,152,161,97,122,	0,504,3136,6516,7155,15908,16977,20808,
#Partially deleted in new
chr5	36961505	36997002	chr5:36961505-36997002	0	+	36961505	36961505	8553170	8	78,152,161,97,627,1626,183,531,	0,617,9370,10439,14270,23170,34116,34966,
#Partially deleted in new
chr5	36995149	37000506	chr5:36995149-37000506	0	+	36995149	36995149	8553170	2	655,134,	0,5223,
#Deleted in new
chr5	36995749	36997002	chr5:36995749-36997002	0	+	36995749	36995749	8553170	2	55,531,	0,722,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	37050942	37065502	chr5:37050942-37065502	0	+	37050942	37050942	8553170	7	944,201,147,275,175,230,976,	0,1423,6243,7948,9901,12847,13584,
#Partially deleted in new
chr5	37058902	37063978	chr5:37058902-37063978	0	+	37058902	37063978	789624	2	263,189,	0,4887,
#Partially deleted in new
chr5	37085055	37085852	chr5:37085055-37085852	7	+	37085055	37085055	16724991	1	797,	0,
#Boundary problem: need 52, got 0, diff 52, mapped 0.0
chr5	37106227	37249428	chr5:37106227-37249428	3	-	37107601	37247698	789624	52	1551,179,90,125,168,59,166,129,31,171,88,254,145,122,102,55,133,167,771,291,193,78,80,83,167,149,940,292,109,159,110,139,165,218,140,229,174,165,81,209,770,150,250,183,104,157,107,233,120,136,128,184,	0,2065,8732,13988,15389,16202,19016,32492,33112,36082,41953,47512,51442,51996,56237,58045,59311,60819,62563,63813,67527,69681,71393,73133,73789,74629,76532,78560,80058,81186,81505,89630,92474,95363,99087,99969,107331,115096,118025,118304,120076,121015,121340,124639,132629,133485,136785,138147,139251,139482,141390,143017,
#Boundary problem: need 51, got 0, diff 51, mapped 0.0
chr5	37106227	37247792	chr5:37106227-37247792	1	-	37107601	37247698	789624	51	1551,179,90,125,168,59,166,129,31,171,88,254,145,122,102,55,133,167,771,291,193,78,80,83,167,149,940,292,109,159,110,139,165,218,140,229,174,165,81,209,770,150,250,183,104,157,107,233,120,136,175,	0,2065,8732,13988,15389,16202,19016,32492,33112,36082,41953,47512,51442,51996,56237,58045,59311,60819,62563,63813,67527,69681,71393,73133,73789,74629,76532,78560,80058,81186,81505,89630,92474,95363,99087,99969,107331,115096,118025,118304,120076,121015,121340,124639,132629,133485,136785,138147,139251,139482,141390,
#Partially deleted in new
chr5	37106977	37213622	chr5:37106977-37213622	0	-	37138822	37213622	789624	37	801,179,90,125,168,59,197,129,171,88,254,108,199,122,102,55,133,167,771,291,193,78,80,80,167,149,940,292,109,159,110,139,165,218,140,100,64,	0,1315,7982,13238,14639,15452,18266,31742,35332,41203,46762,50335,50692,51246,55487,57295,58561,60069,61813,63063,66777,68931,70643,72383,73039,73879,75782,77810,79308,80436,80755,88880,91724,94613,98337,99219,106581,
#Partially deleted in new
chr5	37106977	37213622	chr5:37106977-37213622	0	-	37107601	37213622	789624	37	801,179,90,125,168,59,166,129,31,171,88,254,199,122,102,55,133,167,771,291,193,78,80,83,167,149,940,292,109,159,110,139,165,218,140,229,64,	0,1315,7982,13238,14639,15452,18266,31742,32362,35332,41203,46762,50692,51246,55487,57295,58561,60069,61813,63063,66777,68931,70643,72383,73039,73879,75782,77810,79308,80436,80755,88880,91724,94613,98337,99219,106581,
#Partially deleted in new
chr5	37120261	37142490	chr5:37120261-37142490	0	-	37120261	37120261	8553170	5	79,168,129,31,181,	0,1355,18458,19078,22048,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	37124870	37158277	chr5:37124870-37158277	0	-	37124870	37124870	8553170	9	143,166,129,3141,88,254,108,199,54,	0,373,13849,14469,23310,28869,32442,32799,33353,
#Deleted in new
chr5	37130429	37130700	chr5:37130429-37130700	7	+	37130429	37130429	16724991	1	271,	0,
#Deleted in new
chr5	37138685	37139587	chr5:37138685-37139587	0	-	37138685	37138685	8553170	2	163,248,	0,654,
#Partially deleted in new
chr5	37138701	37142641	chr5:37138701-37142641	0	-	37138701	37138701	8553170	3	147,31,332,	0,638,3608,
#Partially deleted in new
chr5	37138788	37153844	chr5:37138788-37153844	0	-	37138788	37138788	8553170	4	60,171,88,105,	0,3521,9392,14951,
#Partially deleted in new
chr5	37153739	37169095	chr5:37153739-37169095	0	-	37153739	37169095	789624	9	254,150,199,122,102,55,133,167,305,	0,3573,3930,4484,8725,10533,11799,13307,15051,
#Partially deleted in new
chr5	37153860	37162499	chr5:37153860-37162499	0	-	37153860	37153860	8553170	5	133,108,145,122,35,	0,3452,3809,4363,8604,
#Partially deleted in new
chr5	37153904	37157932	chr5:37153904-37157932	0	-	37153904	37153904	8553170	3	89,108,263,	0,3408,3765,
#Partially deleted in new
chr5	37157667	37162654	chr5:37157667-37162654	0	-	37157667	37157667	8553170	3	147,122,190,	0,556,4797,
#Partially deleted in new
chr5	37169531	37176099	chr5:37169531-37176099	0	-	37169531	37169531	8553170	4	30,291,193,191,	0,509,4223,6377,
#Partially deleted in new
chr5	37205193	37206382	chr5:37205193-37206382	0	-	37205193	37205193	8553170	2	261,186,	0,1003,
#Deleted in new
chr5	37209363	37212381	chr5:37209363-37212381	7	+	37209363	37209363	16724991	1	3018,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	37246172	37246479	chr5:37246172-37246479	3	-	37246172	37246172	8553170	1	307,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	37286448	37286977	chr5:37286448-37286977	7	-	37286448	37286448	16724991	1	529,	0,
#Boundary problem: need 35, got 0, diff 35, mapped 0.0
chr5	37288136	37371181	chr5:37288136-37371181	3	-	37291899	37370977	0	35	3902,107,137,111,121,114,130,155,105,154,136,139,192,131,98,116,67,148,63,89,95,111,171,101,153,98,92,74,106,167,93,71,97,138,361,	0,4742,6192,10731,11311,13300,14642,15123,16602,16920,19160,20992,22415,26061,29851,35855,37764,39492,40221,41053,41901,43548,45326,49681,52953,54412,60368,61035,62023,63053,64600,69944,75751,76110,82684,
#Partially deleted in new
chr5	37291632	37293174	chr5:37291632-37293174	0	-	37291632	37291632	8553170	2	406,296,	0,1246,
#Partially deleted in new
chr5	37291837	37310668	chr5:37291837-37310668	0	-	37291837	37291837	8553170	14	201,107,137,111,121,114,130,155,105,154,136,139,169,117,	0,1041,2491,7030,7610,9599,10941,11422,12901,13219,15459,17291,17566,18714,
#Partially deleted in new
chr5	37291838	37370785	chr5:37291838-37370785	1	-	37291899	37364364	0	35	200,107,137,111,121,114,130,155,105,154,136,139,192,131,98,116,67,148,63,89,95,111,171,101,153,98,92,74,106,167,93,71,97,138,120,	0,1040,2490,7029,7609,9598,10940,11421,12900,13218,15458,17290,18713,22359,26149,32153,34062,35790,36519,37351,38199,39846,41624,45979,49251,50710,56666,57333,58321,59351,60898,66242,72049,72408,78827,
#Partially deleted in new
chr5	37291899	37371081	chr5:37291899-37371081	1	-	37291899	37370977	789624	34	139,107,137,111,121,114,130,155,105,154,136,139,131,98,116,67,148,63,89,95,111,171,101,153,98,92,74,106,167,93,71,97,138,261,	0,979,2429,6968,7548,9537,10879,11360,12839,13157,15397,17229,22298,26088,32092,34001,35729,36458,37290,38138,39785,41563,45918,49190,50649,56605,57272,58260,59290,60837,66181,71988,72347,78921,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	37301013	37303416	chr5:37301013-37303416	0	-	37301013	37301013	8553170	3	537,130,157,	0,1765,2246,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	37327134	37327196	chr5:37327134-37327196	3	+	37327134	37327134	8553170	1	62,	0,
#Partially deleted in new
chr5	37342396	37350202	chr5:37342396-37350202	0	-	37342396	37342396	8553170	4	250,92,74,43,	0,6108,6775,7763,
#Partially deleted in new
chr5	37363887	37371103	chr5:37363887-37371103	0	-	37370812	37370977	789624	3	97,138,438,	0,359,6778,
#Partially deleted in new
chr5	37377048	37377971	chr5:37377048-37377971	7	+	37377048	37377048	16724991	2	235,88,	0,835,
#Partially deleted in new
chr5	37379211	37753435	chr5:37379211-37753435	3	+	37379367	37752573	789624	18	181,66,84,121,196,60,134,154,77,175,100,85,139,101,80,117,163,950,	0,277,2390,12788,17163,58710,64027,100622,137302,225852,318443,321846,323737,341903,343643,345722,347671,373274,
#Partially deleted in new
chr5	37379284	37697907	chr5:37379284-37697907	1	+	37379367	37687981	789624	12	108,66,84,121,196,60,134,154,77,175,98,253,	0,204,2317,12715,17090,58637,63954,100549,137229,225779,308625,318370,
#Partially deleted in new
chr5	37379287	37752672	chr5:37379287-37752672	0	+	37379287	37379287	8553170	15	105,84,121,196,60,134,154,77,175,100,85,139,3936,163,187,	0,2314,12712,17087,58634,63951,100546,137226,225776,318367,321770,323661,341827,347595,373198,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	37379301	37381809	chr5:37379301-37381809	0	+	37379301	37379301	8553170	3	91,66,208,	0,187,2300,
#Deleted in new
chr5	37505687	37506857	chr5:37505687-37506857	7	-	37505687	37505687	16724991	1	1170,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	37619984	37620088	chr5:37619984-37620088	3	-	37619984	37619984	8553170	1	104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	37700330	37700437	chr5:37700330-37700437	3	-	37700330	37700330	8553170	1	107,	0,
#Partially deleted in new
chr5	37722642	37752672	chr5:37722642-37752672	0	+	37722642	37722642	8553170	4	292,117,163,187,	0,2291,4240,29843,
#Partially deleted in new
chr5	37724842	37752670	chr5:37724842-37752670	0	+	37724842	37724842	8553170	3	208,163,185,	0,2040,27643,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	37812676	37839680	chr5:37812676-37839680	3	-	37815650	37834796	0	3	3459,177,174,	0,21969,26830,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	37812676	37835491	chr5:37812676-37835491	1	-	37815650	37834796	0	3	3459,99,97,	0,22047,22718,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	37812676	37834822	chr5:37812676-37834822	1	-	37815650	37816130	0	3	3459,80,99,	0,11333,22047,
#Partially deleted in new
chr5	37815650	37835827	chr5:37815650-37835827	1	-	37815650	37835658	0	3	485,99,194,	0,19073,19983,
#Partially deleted in new
chr5	37815650	37835827	chr5:37815650-37835827	1	-	37815650	37835658	0	3	485,177,194,	0,18995,19983,
#Partially deleted in new
chr5	37815650	37839686	chr5:37815650-37839686	1	-	37815650	37834796	0	3	485,99,180,	0,19073,23856,
#Partially deleted in new
chr5	37816025	37835491	chr5:37816025-37835491	0	-	37816025	37834796	789624	3	110,99,97,	0,18698,19369,
#Partially deleted in new
chr5	37816025	37834908	chr5:37816025-37834908	0	-	37816025	37834796	789624	2	110,185,	0,18698,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	37839883	37953827	chr5:37839883-37953827	3	+	37839883	37839883	8553170	4	155,168,225,3271,	0,73646,108277,110673,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	37840437	37874894	chr5:37840437-37874894	1	+	37840437	37840437	789624	4	136,114,160,194,	0,31914,33669,34263,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	37869906	37874894	chr5:37869906-37874894	1	+	37869906	37869906	5263520	3	2559,160,194,	0,4200,4794,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	37873424	37875799	chr5:37873424-37875799	1	+	37873424	37873424	8553170	2	842,1099,	0,1276,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	37899362	37920869	chr5:37899362-37920869	3	-	37899362	37899362	8553170	4	306,51,144,39,	0,20377,20591,21468,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	37939364	37947955	chr5:37939364-37947955	3	-	37939364	37939364	8553170	2	305,137,	0,8454,
#Partially deleted in new
chr5	37948490	37951055	chr5:37948490-37951055	3	+	37948490	37948490	789624	2	47,499,	0,2066,
#Partially deleted in new
chr5	37953401	37966964	chr5:37953401-37966964	3	+	37953401	37953401	8553170	2	207,280,	0,13283,
#Partially deleted in new
chr5	38025696	38183932	chr5:38025696-38183932	3	+	38025696	38025696	789624	3	63,170,229,	0,3190,158007,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	38148479	38153715	chr5:38148479-38153715	3	+	38148479	38148479	789624	2	122,2451,	0,2785,
#Deleted in new
chr5	38197431	38198148	chr5:38197431-38198148	7	+	38197431	38197431	16724991	1	717,	0,
#Partially deleted in new
chr5	38258408	38465021	chr5:38258408-38465021	3	+	38258754	38463986	789624	22	443,110,84,118,136,167,116,319,101,101,145,190,126,244,112,117,181,79,144,84,104,1190,	0,79111,80289,92092,93787,111887,147717,148419,149396,150595,154095,159657,166558,168600,172768,176728,179866,189892,192906,199902,204499,205423,
#Partially deleted in new
chr5	38258408	38464549	chr5:38258408-38464549	1	+	38258754	38463986	789624	23	443,110,84,118,136,167,116,319,101,101,145,190,126,244,112,117,181,24,79,144,84,104,718,	0,79111,80289,92092,93787,111887,147717,148419,149396,150595,154095,159657,166558,168600,172768,176728,179866,187270,189892,192906,199902,204499,205423,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	38258664	38352331	chr5:38258664-38352331	0	+	38258754	38305478	789624	6	187,186,110,84,118,136,	0,46767,78855,80033,91836,93531,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	38282263	38290986	chr5:38282263-38290986	3	-	38282263	38282263	789624	4	338,181,673,387,	0,1659,3425,8336,
#Deleted in new
chr5	38345346	38346551	chr5:38345346-38346551	3	-	38345346	38345346	8553170	2	490,59,	0,1146,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr5	38403540	38464388	chr5:38403540-38464388	1	+	38403881	38463986	789624	17	351,116,319,101,101,145,190,126,244,112,117,181,79,144,84,104,557,	0,2585,3287,4264,5463,8963,14525,21426,23468,27636,31596,34734,44760,47774,54770,59367,60291,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	38403547	38464549	chr5:38403547-38464549	1	+	38427100	38463986	789624	12	344,145,126,244,112,117,181,79,144,84,104,718,	0,8956,21419,23461,27629,31589,34727,44753,47767,54763,59360,60284,
#Partially deleted in new
chr5	38425035	38427376	chr5:38425035-38427376	3	-	38425035	38425035	8553170	2	46,285,	0,2056,
#Deleted in new
chr5	38429891	38430160	chr5:38429891-38430160	7	-	38429891	38429891	16724991	1	269,	0,
#Partially deleted in new
chr5	38445519	38451639	chr5:38445519-38451639	0	+	38445519	38445519	8553170	3	183,79,325,	0,2781,5795,
#Partially deleted in new
chr5	38445539	38464556	chr5:38445539-38464556	1	+	38451342	38463986	789624	6	163,79,144,84,104,725,	0,2761,5775,12771,17368,18292,
#Partially deleted in new
chr5	38445570	38464137	chr5:38445570-38464137	1	+	38451342	38463986	789624	6	132,119,144,84,104,306,	0,2730,5744,12740,17337,18261,
#Partially deleted in new
chr5	38445595	38463865	chr5:38445595-38463865	0	+	38451342	38463865	789624	6	116,70,144,84,104,34,	0,2714,5719,12715,17312,18236,
#Partially deleted in new
chr5	38448255	38464051	chr5:38448255-38464051	1	+	38451342	38463986	789624	5	124,144,84,104,220,	0,3059,10055,14652,15576,
#Partially deleted in new
chr5	38460924	38468307	chr5:38460924-38468307	3	-	38460924	38460924	8553170	2	389,69,	0,7314,
#Deleted in new
chr5	38462589	38464549	chr5:38462589-38464549	0	+	38462589	38462589	8553170	2	422,718,	0,1242,
#Deleted in new
chr5	38466162	38468339	chr5:38466162-38468339	1	-	38466162	38466162	8553170	2	236,101,	0,2076,
#Partially deleted in new
chr5	38474962	38595404	chr5:38474962-38595404	3	-	38481594	38530647	0	20	7256,79,94,162,168,102,180,214,71,163,146,170,130,255,175,164,140,115,161,144,	0,7626,9812,10856,14115,15227,18643,21419,24550,27674,29013,30942,31540,35501,36827,48456,52192,53763,55543,120298,
#Partially deleted in new
chr5	38480967	38556646	chr5:38480967-38556646	1	-	38481594	38530647	0	20	1251,79,94,162,168,102,180,214,71,163,146,170,130,255,175,164,140,115,161,313,	0,1621,3807,4851,8110,9222,12638,15414,18545,21669,23008,24937,25535,29496,30822,42451,46187,47758,49538,75366,
#Partially deleted in new
chr5	38485596	38489245	chr5:38485596-38489245	0	-	38485596	38485596	8553170	2	384,168,	0,3481,
#Partially deleted in new
chr5	38485936	38502675	chr5:38485936-38502675	0	-	38496444	38502675	789624	7	44,168,102,180,153,71,39,	0,3141,4253,7669,10445,13576,16700,
#Partially deleted in new
chr5	38527174	38556636	chr5:38527174-38556636	0	-	38527174	38530647	789624	5	120,115,161,61,303,	0,1551,3331,27830,29159,
#Deleted in new
chr5	38528671	38530917	chr5:38528671-38530917	0	-	38528671	38528671	8553170	2	169,412,	0,1834,
#Partially deleted in new
chr5	38528758	38557465	chr5:38528758-38557465	0	-	38528758	38530647	789624	3	82,161,331,	0,1747,28376,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	38556785	38608862	chr5:38556785-38608862	1	+	38556785	38556785	789624	3	2392,148,1263,	0,38136,50814,
#Deleted in new
chr5	38557501	38557561	chr5:38557501-38557561	3	-	38557501	38557501	5263520	1	60,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	38558829	38671216	chr5:38558829-38671216	3	+	38558829	38558829	789624	9	348,148,101,96,83,203,84,88,191,	0,36092,82099,85520,87802,88403,94247,95035,112196,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	38558941	38579594	chr5:38558941-38579594	0	+	38558941	38558941	8553170	2	236,449,	0,20204,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	38594970	38608354	chr5:38594970-38608354	0	-	38594970	38594970	8553170	4	95,123,102,203,	0,290,11234,13181,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	38682069	38685126	chr5:38682069-38685126	3	+	38682069	38682069	8553170	2	233,321,	0,2736,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	38710366	38720273	chr5:38710366-38720273	1	-	38710366	38710366	789624	5	410,72,163,66,89,	0,982,5273,6098,9818,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	38710368	38845763	chr5:38710368-38845763	3	-	38710368	38710368	8553170	6	408,72,66,91,117,96,	0,980,6096,33558,85984,135299,
#Partially deleted in new
chr5	38736054	38845768	chr5:38736054-38845768	0	-	38736054	38736054	8553170	4	274,91,117,101,	0,7872,60298,109613,
#Partially deleted in new
chr5	38763157	38764289	chr5:38763157-38764289	7	-	38763157	38763157	16724991	2	109,475,	0,657,
#Partially deleted in new
chr5	38783579	38792754	chr5:38783579-38792754	3	+	38783579	38783579	8553170	2	67,498,	0,8677,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	38843262	38845829	chr5:38843262-38845829	1	-	38843262	38843262	8553170	2	675,162,	0,2405,
#Partially deleted in new
chr5	38845857	38886657	chr5:38845857-38886657	1	+	38869044	38886228	789624	7	269,86,173,172,285,136,619,	0,23174,30343,35735,37969,39491,40181,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr5	38845998	38935641	chr5:38845998-38935641	3	+	38869044	38933444	789624	18	389,86,173,172,285,136,152,143,151,77,223,180,105,174,168,82,73,2770,	0,23033,30202,35594,37828,39350,40040,57883,58354,71547,72841,75616,77151,78423,79205,85884,86464,86873,
#Partially deleted in new
chr5	38904397	38919566	chr5:38904397-38919566	0	+	38904397	38919367	789624	4	106,77,223,360,	0,13148,14442,14809,
#Partially deleted in new
chr5	38937918	39074408	chr5:38937918-39074408	3	-	38942303	39074377	0	38	4460,139,124,156,234,85,178,1009,230,107,93,88,110,79,77,165,127,200,136,47,102,166,101,81,67,91,88,83,68,68,170,127,64,132,65,98,48,80,	0,4914,6527,6994,7572,8549,9345,11793,14277,15066,15542,16855,17676,19733,20524,20748,21276,21860,22479,24396,24566,24957,26873,28722,29242,29418,30024,33958,37618,40664,43948,53030,58900,64616,65639,83120,136192,136410,
#Partially deleted in new
chr5	38940014	39074389	chr5:38940014-39074389	0	-	38978627	39074377	0	38	2364,139,124,156,120,85,178,1009,230,107,93,88,110,79,77,165,127,200,136,47,102,166,101,81,67,91,88,83,68,66,170,127,64,132,65,98,48,61,	0,2818,4431,4898,5476,6453,7249,9697,12181,12970,13446,14759,15580,17637,18428,18652,19180,19764,20383,22300,22470,22861,24777,26626,27146,27322,27928,31862,35522,38568,41852,50934,56804,62520,63543,81024,134096,134314,
#Partially deleted in new
chr5	38940019	39074399	chr5:38940019-39074399	1	-	38942303	39074377	0	39	2359,139,124,156,234,85,178,72,1009,230,107,93,88,110,79,77,165,127,200,136,47,102,166,101,81,67,91,88,83,68,68,170,127,64,132,65,98,48,71,	0,2813,4426,4893,5471,6448,7244,9336,9692,12176,12965,13441,14754,15575,17632,18423,18647,19175,19759,20378,22295,22465,22856,24772,26621,27141,27317,27923,31857,35517,38563,41847,50929,56799,62515,63538,81019,134091,134309,
#Partially deleted in new
chr5	38942223	38943247	chr5:38942223-38943247	0	-	38942223	38942223	8553170	2	155,415,	0,609,
#Partially deleted in new
chr5	38954698	38959332	chr5:38954698-38959332	0	-	38954698	38954698	8553170	6	211,110,79,77,165,138,	0,896,2953,3744,3968,4496,
#Partially deleted in new
chr5	38962950	38970620	chr5:38962950-38970620	0	-	38962950	38962950	8553170	7	91,101,81,67,91,88,119,	0,1841,3690,4210,4386,4992,7551,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	38966814	38971961	chr5:38966814-38971961	0	-	38966814	38966814	8553170	4	413,91,88,85,	0,522,1128,5062,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	38969686	39074389	chr5:38969686-39074389	0	-	38969686	38969686	8553170	10	2273,68,68,170,127,64,132,65,98,61,	0,5850,8896,12180,21262,27132,32848,33871,51352,104642,
#Partially deleted in new
chr5	38980879	39074399	chr5:38980879-39074399	0	-	38980879	38980879	8553170	8	1157,127,64,132,65,98,48,71,	0,10069,15939,21655,22678,40159,93231,93449,
#Partially deleted in new
chr5	38981897	39074389	chr5:38981897-39074389	0	-	38981897	39074377	789624	7	139,127,64,132,65,98,61,	0,9051,14921,20637,21660,39141,92431,
#Deleted in new
chr5	39022410	39022558	chr5:39022410-39022558	7	+	39022410	39022410	16724991	1	148,	0,
#Partially deleted in new
chr5	39105254	39219606	chr5:39105254-39219606	3	-	39107442	39202960	0	18	2211,32,34,163,100,67,26,67,23,142,160,121,35,20,47,157,1162,164,	0,2976,5101,13619,14280,17081,18998,22486,25335,28953,29600,32345,33402,33978,35840,48193,96571,114188,
#Partially deleted in new
chr5	39105254	39270657	chr5:39105254-39270657	1	-	39107442	39270571	0	19	2211,32,34,163,100,67,26,138,67,23,142,160,121,35,20,47,157,1162,89,	0,2976,5101,13619,14280,17081,18998,20743,22486,25335,28953,29600,32345,33402,33978,35840,48193,96571,165314,
#Partially deleted in new
chr5	39105254	39270640	chr5:39105254-39270640	1	-	39107442	39270571	0	19	2211,32,34,163,100,67,26,138,67,23,142,160,121,35,20,47,157,1162,72,	0,2976,5101,13619,14280,17081,18998,20743,22486,25335,28953,29600,32345,33402,33978,35840,48193,96571,165314,
#Partially deleted in new
chr5	39107057	39124317	chr5:39107057-39124317	0	-	39107057	39107057	8553170	7	408,32,34,163,100,67,65,	0,1173,3298,11816,12477,15278,17195,
#Deleted in new
chr5	39107168	39110642	chr5:39107168-39110642	0	-	39107168	39107168	8553170	3	297,32,287,	0,1062,3187,
#Partially deleted in new
chr5	39107283	39203027	chr5:39107283-39203027	1	-	39107442	39202960	0	17	182,32,34,163,100,67,26,67,23,142,160,121,35,20,47,157,1202,	0,947,3072,11590,12251,15052,16969,20457,23306,26924,27571,30316,31373,31949,33811,46164,94542,
#Partially deleted in new
chr5	39107301	39219573	chr5:39107301-39219573	1	-	39107442	39202960	0	19	164,32,34,163,100,67,26,138,67,23,142,160,121,35,20,47,157,1162,131,	0,929,3054,11572,12233,15034,16951,18696,20439,23288,26906,27553,30298,31355,31931,33793,46146,94524,112141,
#Partially deleted in new
chr5	39107307	39127807	chr5:39107307-39127807	0	-	39125993	39127807	789624	9	158,32,34,163,100,67,26,164,67,	0,923,3048,11566,12227,15028,16945,18664,20433,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	39137403	39140030	chr5:39137403-39140030	0	-	39137403	39137403	8553170	1	2627,	0,
#Partially deleted in new
chr5	39169209	39170335	chr5:39169209-39170335	7	-	39169209	39169209	16724991	2	352,628,	0,498,
#Partially deleted in new
chr5	39202437	39274528	chr5:39202437-39274528	0	-	39202437	39202960	789624	2	550,126,	0,71965,
#Partially deleted in new
chr5	39202616	39270644	chr5:39202616-39270644	0	-	39202616	39202960	789624	3	371,136,76,	0,48054,67952,
#Partially deleted in new
chr5	39202773	39219576	chr5:39202773-39219576	0	-	39202773	39202960	789624	3	214,340,134,	0,9904,16669,
#Partially deleted in new
chr5	39202893	39219563	chr5:39202893-39219563	0	-	39202893	39202960	789624	4	94,34,340,121,	0,8164,9784,16549,
#Partially deleted in new
chr5	39202955	39219563	chr5:39202955-39219563	0	-	39202955	39202960	8553170	4	32,101,340,121,	0,5908,9722,16487,
#Partially deleted in new
chr5	39269644	39274472	chr5:39269644-39274472	0	-	39269644	39269644	8553170	3	175,260,70,	0,924,4758,
#Partially deleted in new
chr5	39284261	39364560	chr5:39284261-39364560	3	-	39285198	39364464	0	11	972,229,176,129,241,255,139,148,145,106,173,	0,4461,22355,23968,26875,31513,47414,56884,57294,57829,80126,
#Partially deleted in new
chr5	39315768	39371290	chr5:39315768-39371290	0	-	39315768	39315768	8553170	6	261,139,148,145,106,48,	0,15907,25377,25787,26322,55474,
#Partially deleted in new
chr5	39331772	39424868	chr5:39331772-39424868	0	-	39331772	39331772	8553170	6	42,148,145,106,54,65,	0,9373,9783,10318,57026,93031,
#Partially deleted in new
chr5	39341080	39364495	chr5:39341080-39364495	0	-	39341080	39341080	8553170	4	213,145,106,108,	0,475,1010,23307,
#Partially deleted in new
chr5	39371674	39425233	chr5:39371674-39425233	1	-	39375018	39394320	0	14	1751,71,110,633,163,654,54,27,81,132,99,140,192,430,	0,3339,4322,4975,9779,10943,17124,17422,18177,18769,20690,21579,22555,53129,
#Partially deleted in new
chr5	39371677	39425170	chr5:39371677-39425170	3	-	39375018	39394320	0	15	1748,71,110,633,163,654,63,54,27,81,132,99,140,192,367,	0,3336,4319,4972,9776,10940,16627,17121,17419,18174,18766,20687,21576,22552,53126,
#Partially deleted in new
chr5	39371677	39424980	chr5:39371677-39424980	1	-	39375018	39394320	0	14	1748,71,110,633,163,63,54,27,81,132,99,140,192,177,	0,3336,4319,4972,9776,16627,17121,17419,18174,18766,20687,21576,22552,53126,
#Partially deleted in new
chr5	39373020	39394400	chr5:39373020-39394400	1	-	39375018	39394320	0	13	405,71,110,633,163,654,54,27,81,132,99,140,171,	0,1993,2976,3629,8433,9597,15778,16076,16831,17423,19344,20233,21209,
#Partially deleted in new
chr5	39374744	39376042	chr5:39374744-39376042	0	-	39374744	39374744	8553170	2	340,46,	0,1252,
#Partially deleted in new
chr5	39385167	39392439	chr5:39385167-39392439	0	-	39385167	39385167	8553170	7	261,63,54,27,81,132,75,	0,3137,3631,3929,4684,5276,7197,
#Deleted in new
chr5	39387696	39388857	chr5:39387696-39388857	0	-	39387696	39387696	8553170	2	671,59,	0,1102,
#Partially deleted in new
chr5	39389107	39424913	chr5:39389107-39424913	0	-	39392343	39394320	789624	7	16,81,132,260,140,192,110,	0,744,1336,3096,4146,5122,35696,
#Partially deleted in new
chr5	39393257	39462300	chr5:39393257-39462300	0	-	39393257	39394320	789624	3	136,192,223,	0,972,68820,
#Partially deleted in new
chr5	39393283	39424868	chr5:39393283-39424868	0	-	39393283	39394320	789624	4	110,192,194,65,	0,946,30420,31520,
#Partially deleted in new
chr5	39394293	39408837	chr5:39394293-39408837	0	-	39394293	39394293	8553170	2	128,457,	0,14087,
#Partially deleted in new
chr5	39394353	39424870	chr5:39394353-39424870	0	-	39394353	39394353	8553170	3	68,165,67,	0,23827,30450,
#Partially deleted in new
chr5	39417552	39424870	chr5:39417552-39424870	0	-	39417552	39417552	8553170	3	58,165,67,	0,628,7251,
#Partially deleted in new
chr5	39417572	39462154	chr5:39417572-39462154	0	-	39417572	39417572	8553170	3	38,165,77,	0,608,44505,
#Partially deleted in new
chr5	39417945	39424959	chr5:39417945-39424959	0	-	39417945	39417945	8553170	2	400,156,	0,6858,
#Deleted in new
chr5	39460866	39462298	chr5:39460866-39462298	0	-	39460866	39460866	8553170	2	385,221,	0,1211,
#Deleted in new
chr5	39520430	39524708	chr5:39520430-39524708	3	+	39520430	39520430	789624	3	32,109,458,	0,1088,3820,
#Deleted in new
chr5	39521518	39524703	chr5:39521518-39524703	0	+	39521518	39521518	8553170	2	109,441,	0,2744,
#Deleted in new
chr5	39571477	39572639	chr5:39571477-39572639	7	-	39571477	39571477	16724991	1	1162,	0,
#Partially deleted in new
chr5	39718983	39721513	chr5:39718983-39721513	7	-	39718983	39718983	16724991	1	2530,	0,
#Deleted in new
chr5	39888575	39889059	chr5:39888575-39889059	7	-	39888575	39888575	16724991	1	484,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	39892137	40053315	chr5:39892137-40053315	2	+	39892137	39892137	8553170	3	109,94,367,	0,33027,160811,
#Partially deleted in new
chr5	40010911	40053324	chr5:40010911-40053324	1	+	40010911	40010911	8553170	4	99,71,187,376,	0,367,41378,42037,
#Deleted in new
chr5	40066650	40067200	chr5:40066650-40067200	7	+	40066650	40066650	16724991	1	550,	0,
#Partially deleted in new
chr5	40260656	40267657	chr5:40260656-40267657	0	+	40260656	40260656	8553170	2	197,302,	0,6699,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	40269557	40269719	chr5:40269557-40269719	3	+	40269557	40269557	8553170	1	162,	0,
#Partially deleted in new
chr5	40415136	40431491	chr5:40415136-40431491	3	+	40415136	40415136	8553170	2	62,1560,	0,14795,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	40463561	40504563	chr5:40463561-40504563	3	+	40463561	40463561	8553170	3	119,123,693,	0,22814,40309,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	40463561	40504563	chr5:40463561-40504563	0	+	40463561	40463561	8553170	2	119,693,	0,40309,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	40474907	40490430	chr5:40474907-40490430	3	-	40474907	40474907	8553170	3	879,230,2420,	0,2955,13103,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	40568104	40755948	chr5:40568104-40755948	1	-	40569403	40747018	789624	3	1477,222,125,	0,178693,187719,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	40611491	40755963	chr5:40611491-40755963	1	-	40613314	40747018	789624	3	1890,222,140,	0,135306,144332,
#Partially deleted in new
chr5	40654962	40655094	chr5:40654962-40655094	3	+	40654962	40654962	8553170	1	132,	0,
#Partially deleted in new
chr5	40679497	40693735	chr5:40679497-40693735	3	+	40680993	40692378	789624	3	981,910,1957,	0,1453,12281,
#Deleted in new
chr5	40679929	40681680	chr5:40679929-40681680	0	+	40679929	40679929	8553170	2	549,730,	0,1021,
#Partially deleted in new
chr5	40681489	40691967	chr5:40681489-40691967	0	+	40681489	40681489	8553170	2	371,189,	0,10289,
#Deleted in new
chr5	40681686	40685451	chr5:40681686-40685451	0	+	40681686	40681686	8553170	2	174,60,	0,3705,
#Partially deleted in new
chr5	40681701	40692043	chr5:40681701-40692043	0	+	40681701	40681701	8553170	3	159,113,265,	0,3669,10077,
#Partially deleted in new
chr5	40714474	40755975	chr5:40714474-40755975	3	-	40716144	40747018	789624	5	2024,132,82,222,152,	0,13870,15787,32323,41349,
#Partially deleted in new
chr5	40715135	40755945	chr5:40715135-40755945	0	-	40715135	40715135	8553170	3	1363,222,122,	0,31662,40688,
#Partially deleted in new
chr5	40715943	40755960	chr5:40715943-40755960	0	-	40715943	40715943	8553170	4	555,132,222,137,	0,12401,30854,39880,
#Partially deleted in new
chr5	40716144	40755949	chr5:40716144-40755949	0	-	40716144	40716144	8553170	4	354,82,222,126,	0,14117,30653,39679,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	40759378	40798198	chr5:40759378-40798198	3	-	40762777	40798189	0	9	3644,127,487,225,88,145,94,142,136,	0,5135,5373,8087,10037,12340,16031,18066,38684,
#Partially deleted in new
chr5	40762769	40798374	chr5:40762769-40798374	1	-	40762777	40798189	0	10	253,127,487,225,88,145,45,94,142,312,	0,1744,1982,4696,6646,8949,12158,12640,14675,35293,
#Deleted in new
chr5	40764241	40764788	chr5:40764241-40764788	0	-	40764241	40764241	8553170	2	399,37,	0,510,
#Partially deleted in new
chr5	40764769	40771855	chr5:40764769-40771855	0	-	40764769	40764769	8553170	4	469,225,88,137,	0,2696,4646,6949,
#Partially deleted in new
chr5	40764936	40798148	chr5:40764936-40798148	0	-	40764936	40764936	8553170	7	302,225,88,145,94,142,86,	0,2529,4479,6782,10473,12508,33126,
#Partially deleted in new
chr5	40767506	40798189	chr5:40767506-40798189	0	-	40767506	40767506	8553170	5	184,145,94,142,127,	0,4212,7903,9938,30556,
#Partially deleted in new
chr5	40768384	40798174	chr5:40768384-40798174	1	-	40768882	40798162	789624	6	553,88,145,94,142,112,	0,1031,3334,7025,9060,29678,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	40777015	40798159	chr5:40777015-40798159	0	-	40777015	40777015	8553170	2	571,97,	0,21047,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	40777159	40798170	chr5:40777159-40798170	0	-	40777159	40777159	8553170	3	175,142,108,	0,285,20903,
#Deleted in new
chr5	40790076	40790204	chr5:40790076-40790204	3	-	40790076	40790076	8553170	1	128,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	40825261	40835335	chr5:40825261-40835335	3	-	40832503	40835185	0	4	7312,85,136,153,	0,8919,9209,9921,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	40827702	40832555	chr5:40827702-40832555	0	-	40827702	40827702	8553170	3	249,72,114,	0,3620,4739,
#Partially deleted in new
chr5	40832102	40835212	chr5:40832102-40835212	1	-	40832487	40835185	789624	3	471,136,30,	0,2368,3080,
#Partially deleted in new
chr5	40832447	40834607	chr5:40832447-40834607	0	-	40832447	40832447	8553170	4	126,77,85,137,	0,1513,1733,2023,
#Partially deleted in new
chr5	40832457	40835186	chr5:40832457-40835186	0	-	40832457	40832457	8553170	4	116,85,136,168,	0,1723,2013,2561,
#Partially deleted in new
chr5	40832655	40832735	chr5:40832655-40832735	3	-	40832655	40832655	789624	1	80,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	40833878	40835212	chr5:40833878-40835212	1	-	40834155	40835185	789624	3	387,136,30,	0,592,1304,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	40841183	40855354	chr5:40841183-40855354	3	+	40841382	40854446	789624	3	482,558,3181,	0,1968,10990,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	40841307	40860175	chr5:40841307-40860175	1	+	40841382	40860089	789624	3	358,558,178,	0,1844,18690,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr5	40909251	40982939	chr5:40909251-40982939	3	+	40909610	40981573	0	18	365,56,76,142,148,139,171,244,111,167,229,172,88,133,192,91,185,1548,	0,19328,21812,25073,27086,28300,35946,38350,40652,46135,48781,50197,52833,55489,63151,67498,70473,72140,
#Deleted in new
chr5	40911066	40911128	chr5:40911066-40911128	3	-	40911066	40911066	8553170	1	62,	0,
#Partially deleted in new
chr5	40934322	40945360	chr5:40934322-40945360	0	+	40934322	40934322	8553170	4	144,148,139,163,	0,2015,3229,10875,
#Deleted in new
chr5	40936337	40937487	chr5:40936337-40937487	0	+	40936337	40936337	8553170	2	148,250,	0,900,
#Partially deleted in new
chr5	40964478	40972571	chr5:40964478-40972571	0	+	40964478	40964478	8553170	2	395,169,	0,7924,
#Deleted in new
chr5	40967504	40967763	chr5:40967504-40967763	7	-	40967504	40967504	16724991	1	259,	0,
#Partially deleted in new
chr5	40972402	40976841	chr5:40972402-40976841	0	+	40972402	40972402	8553170	2	192,92,	0,4347,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	40972520	40980350	chr5:40972520-40980350	0	+	40972520	40972520	8553170	4	74,91,185,364,	0,4229,7204,7466,
#Partially deleted in new
chr5	40976662	40981766	chr5:40976662-40981766	0	+	40976662	40976662	8553170	3	178,185,375,	0,3062,4729,
#Deleted in new
chr5	40998016	41000068	chr5:40998016-41000068	0	-	40998016	40998016	8553170	3	142,66,392,	0,595,1660,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr5	40998019	41051557	chr5:40998019-41051557	0	-	40998019	40998019	8553170	31	139,66,103,132,156,183,147,180,115,141,188,127,158,153,98,121,90,96,136,80,120,27,153,108,117,108,44,142,336,114,54,	0,592,1657,2200,2658,6326,6754,7117,7511,9294,10586,11260,11902,14563,17361,19830,20321,20671,20863,34722,35021,35818,40716,41428,44072,47726,49701,50304,51081,52957,53484,
#Partially deleted in new
chr5	40998019	41058206	chr5:40998019-41058206	0	-	40998019	40998019	8553170	36	139,66,103,132,156,183,147,115,141,188,127,158,153,98,121,90,96,136,80,120,27,153,108,117,108,44,142,41,157,114,123,74,114,70,93,144,	0,592,1657,2200,2658,6326,6754,7511,9294,10586,11260,11902,14563,17361,19830,20321,20671,20863,34722,35021,35818,40716,41428,44072,47726,49701,50304,51081,51260,52957,54445,56747,57722,59089,59248,60043,
#Partially deleted in new
chr5	40998020	41058224	chr5:40998020-41058224	1	-	40998051	41050985	789624	32	138,66,103,132,156,183,147,115,141,188,127,158,153,98,121,90,96,136,80,120,27,153,108,117,108,44,142,41,157,114,24,162,	0,591,1656,2199,2657,6325,6753,7510,9293,10585,11259,11901,14562,17360,19829,20320,20670,20862,34721,35020,35817,40715,41427,44071,47725,49700,50303,51080,51259,52956,54444,60042,
#Partially deleted in new
chr5	40998021	41071303	chr5:40998021-41071303	3	-	40998051	41070852	789624	42	137,66,103,132,156,183,147,115,141,188,127,158,153,98,121,90,96,136,80,120,27,153,108,117,108,44,142,41,157,114,123,74,114,70,93,141,155,99,160,111,62,479,	0,590,1655,2198,2656,6324,6752,7509,9292,10584,11258,11900,14561,17359,19828,20319,20669,20861,34720,35019,35816,40714,41426,44070,47724,49699,50302,51079,51258,52955,54443,56745,57720,59087,59246,60041,63548,66450,67309,69086,71669,72803,
#Partially deleted in new
chr5	41048203	41071342	chr5:41048203-41071342	0	-	41048203	41048203	8553170	16	262,41,157,114,123,74,114,70,93,141,155,99,160,111,62,518,	0,897,1076,2773,4261,6563,7538,8905,9064,9859,13366,16268,17127,18904,21487,22621,
#Partially deleted in new
chr5	41142233	41261438	chr5:41142233-41261438	3	-	41142824	41203230	0	18	773,242,91,189,133,112,172,226,167,123,241,201,139,142,145,157,163,245,	0,7007,7701,11576,12738,16440,16848,17908,19459,29991,34241,39125,43836,53558,57534,59324,60854,118960,
#Partially deleted in new
chr5	41142233	41213510	chr5:41142233-41213510	1	-	41142824	41203230	0	18	773,242,91,189,133,112,172,226,167,123,241,201,139,142,145,157,163,135,	0,7007,7701,11576,12738,16440,16848,17908,19459,29991,34241,39125,43836,53558,57534,59324,60854,71142,
#Partially deleted in new
chr5	41152746	41155104	chr5:41152746-41155104	0	-	41152746	41152746	8553170	3	291,189,133,	0,1063,2225,
#Partially deleted in new
chr5	41155058	41160369	chr5:41155058-41160369	0	-	41155058	41155058	8553170	4	46,112,172,228,	0,3615,4023,5083,
#Partially deleted in new
chr5	41160209	41186391	chr5:41160209-41186391	0	-	41160209	41160209	8553170	6	158,167,123,241,201,125,	0,1483,12015,16265,21149,26057,
#Partially deleted in new
chr5	41160303	41172679	chr5:41160303-41172679	0	-	41160303	41160303	8553170	4	64,167,123,173,	0,1389,11921,12203,
#Partially deleted in new
chr5	41199812	41213021	chr5:41199812-41213021	0	-	41199812	41203230	789624	4	100,157,163,110,	0,1745,3275,13099,
#Partially deleted in new
chr5	41203137	41213595	chr5:41203137-41213595	0	-	41203137	41203230	789624	3	113,157,220,	0,440,10238,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	41306953	41510601	chr5:41306953-41510601	1	-	41313616	41510526	789624	3	6817,709,178,	0,74872,203470,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	41306956	41510628	chr5:41306956-41510628	3	-	41313616	41510526	789624	4	5582,1042,709,205,	0,5772,74869,203467,
#Partially deleted in new
chr5	41585881	41587787	chr5:41585881-41587787	7	-	41585881	41585881	16724991	2	910,652,	0,1254,
#Partially deleted in new
chr5	41730064	41870519	chr5:41730064-41870519	3	-	41731728	41870358	0	17	1706,102,81,90,76,73,49,95,115,108,61,107,150,136,91,109,239,	0,9325,19462,32046,63938,64612,70957,73004,75502,77266,110386,112610,119965,123354,131249,132577,140216,
#Partially deleted in new
chr5	41730740	41794380	chr5:41730740-41794380	1	-	41731728	41794059	0	6	1030,102,81,90,76,214,	0,8649,18786,31370,63262,63426,
#Partially deleted in new
chr5	41730840	41794583	chr5:41730840-41794583	1	-	41731728	41794059	0	6	930,102,81,90,76,162,	0,8549,18686,31270,63162,63581,
#Partially deleted in new
chr5	41731369	41843657	chr5:41731369-41843657	1	-	41731728	41843580	789624	13	401,102,81,90,76,73,49,95,115,108,61,107,83,	0,8020,18157,30741,62633,63307,69652,71699,74197,75961,109081,111305,112205,
#Partially deleted in new
chr5	41731580	41794135	chr5:41731580-41794135	0	-	41731580	41731580	8553170	5	190,102,81,90,133,	0,7809,17946,30530,62422,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	41731738	41739721	chr5:41731738-41739721	0	-	41731738	41731738	8553170	2	32,332,	0,7651,
#Partially deleted in new
chr5	41749526	41794643	chr5:41749526-41794643	0	-	41749526	41749526	8553170	4	81,90,76,103,	0,12584,44476,45014,
#Partially deleted in new
chr5	41749600	41842757	chr5:41749600-41842757	0	-	41749600	41749600	8553170	4	7,90,61,83,	0,12510,90850,93074,
#Deleted in new
chr5	41870029	41872241	chr5:41870029-41872241	3	+	41870029	41870029	789624	3	163,92,1476,	0,261,736,
#Deleted in new
chr5	41870119	41870716	chr5:41870119-41870716	0	+	41870119	41870119	8553170	2	73,426,	0,171,
#Deleted in new
chr5	41895067	41895599	chr5:41895067-41895599	7	+	41895067	41895067	16724991	1	532,	0,
#Partially deleted in new
chr5	41904187	41911179	chr5:41904187-41911179	0	+	41904187	41904187	8553170	5	91,107,86,147,132,	0,3548,4121,5558,6860,
#Partially deleted in new
chr5	41904348	41921636	chr5:41904348-41921636	3	+	41904367	41917299	789624	6	119,107,147,132,115,4621,	0,3387,5397,6699,7720,12667,
#Partially deleted in new
chr5	41904367	41919694	chr5:41904367-41919694	1	+	41904367	41918762	789624	6	100,107,147,34,2,1001,	0,3368,5378,6680,14319,14326,
#Partially deleted in new
chr5	41904370	41911333	chr5:41904370-41911333	0	+	41904370	41904370	8553170	4	97,107,147,286,	0,3365,5375,6677,
#Partially deleted in new
chr5	41925253	41941743	chr5:41925253-41941743	3	+	41925309	41941281	0	7	245,236,221,76,176,176,552,	0,1759,4443,8692,8879,14187,15938,
#Partially deleted in new
chr5	41925253	41935085	chr5:41925253-41935085	1	+	41925309	41934334	0	5	245,236,221,76,953,	0,1759,4443,8692,8879,
#Partially deleted in new
chr5	41925253	41934309	chr5:41925253-41934309	0	+	41925309	41929702	789624	4	245,221,76,177,	0,4443,8692,8879,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	41925298	41929917	chr5:41925298-41929917	0	+	41925309	41928557	789624	4	200,236,174,221,	0,1714,3219,4398,
#Partially deleted in new
chr5	41925300	41941568	chr5:41925300-41941568	1	+	41925309	41941211	789624	6	198,236,221,76,176,377,	0,1712,4396,8645,8832,15891,
#Partially deleted in new
chr5	41925320	41930155	chr5:41925320-41930155	0	+	41925320	41925320	8553170	2	178,459,	0,4376,
#Partially deleted in new
chr5	41939297	41941570	chr5:41939297-41941570	0	+	41939297	41939297	8553170	2	319,379,	0,1894,
#Deleted in new
chr5	41951312	41952193	chr5:41951312-41952193	7	-	41951312	41951312	16724991	1	881,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	41963867	41963969	chr5:41963867-41963969	3	-	41963867	41963867	8553170	1	102,	0,
#Deleted in new
chr5	41967138	41968366	chr5:41967138-41968366	7	-	41967138	41967138	16724991	2	925,97,	0,1131,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	42188265	42191523	chr5:42188265-42191523	3	+	42188265	42188265	8553170	1	3258,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	42423776	42721877	chr5:42423776-42721877	3	+	42565874	42719424	0	10	179,81,66,130,173,179,166,91,70,3425,	0,142087,205261,265113,271140,276047,287430,289652,294275,294676,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	42424451	42721878	chr5:42424451-42721878	1	+	42565874	42719424	0	11	147,285,81,66,130,173,179,166,91,70,3426,	0,89628,141412,204586,264438,270465,275372,286755,288977,293600,294001,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	42424451	42721878	chr5:42424451-42721878	1	+	42424588	42719424	789624	10	147,81,66,130,173,179,166,91,70,3426,	0,141412,204586,264438,270465,275372,286755,288977,293600,294001,
#Partially deleted in new
chr5	42424517	42659364	chr5:42424517-42659364	0	+	42565874	42647672	789624	6	81,81,66,32,145,161,	0,141346,204520,221814,223134,234686,
#Deleted in new
chr5	42465399	42468868	chr5:42465399-42468868	7	-	42465399	42465399	16724991	2	613,319,	0,3150,
#Deleted in new
chr5	42466892	42468300	chr5:42466892-42468300	7	-	42466892	42466892	16724991	1	1408,	0,
#Partially deleted in new
chr5	42514146	42619821	chr5:42514146-42619821	0	+	42514146	42514146	8553170	4	218,146,81,170,	0,720,51717,105505,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	42548042	42721878	chr5:42548042-42721878	1	+	42565874	42719424	0	10	109,81,66,130,173,179,166,91,70,3426,	0,17821,80995,140847,146874,151781,163164,165386,170009,170410,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	42548212	42721878	chr5:42548212-42721878	1	+	42565874	42719424	0	10	317,81,66,130,173,179,166,91,70,3426,	0,17651,80825,140677,146704,151611,162994,165216,169839,170240,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	42549555	42721878	chr5:42549555-42721878	1	+	42565874	42719424	0	10	142,81,66,130,173,179,166,91,70,3426,	0,16308,79482,139334,145361,150268,161651,163873,168496,168897,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	42550079	42721878	chr5:42550079-42721878	1	+	42565874	42719424	0	10	37,81,66,130,173,179,166,91,70,3426,	0,15784,78958,138810,144837,149744,161127,163349,167972,168373,
#Partially deleted in new
chr5	42565855	42719791	chr5:42565855-42719791	0	+	42565874	42695038	789624	8	89,66,173,179,166,91,70,1339,	0,63182,129061,133968,145351,147573,152196,152597,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	42565863	42721878	chr5:42565863-42721878	1	+	42565874	42719424	0	8	81,130,173,179,166,91,70,3426,	0,123026,129053,133960,145343,147565,152188,152589,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	42565863	42721878	chr5:42565863-42721878	1	+	42565874	42718465	789624	8	81,66,130,173,179,166,91,3426,	0,63174,123026,129053,133960,145343,147565,152589,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	42713866	42718814	chr5:42713866-42718814	0	+	42713866	42713866	8553170	3	350,70,362,	0,4185,4586,
#Deleted in new
chr5	42729137	42729519	chr5:42729137-42729519	7	+	42729137	42729137	16724991	1	382,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	42756800	42802360	chr5:42756800-42802360	3	+	42759121	42799781	789624	9	85,89,106,69,65,103,128,84,2702,	0,2319,5642,12796,22657,26673,40028,42574,42858,
#Partially deleted in new
chr5	42756817	42800351	chr5:42756817-42800351	1	+	42759121	42799781	789624	7	68,89,106,69,128,84,693,	0,2302,5625,12779,40011,42557,42841,
#Partially deleted in new
chr5	42799879	42812079	chr5:42799879-42812079	1	-	42800719	42808353	789624	5	1452,118,213,216,244,	0,4776,7016,8271,11956,
#Partially deleted in new
chr5	42799882	42811892	chr5:42799882-42811892	0	-	42799882	42799882	8553170	4	1449,2453,216,57,	0,4773,8268,11953,
#Partially deleted in new
chr5	42800111	42811892	chr5:42800111-42811892	1	-	42800719	42808353	789624	6	1220,118,213,216,29,57,	0,4544,6784,8039,9648,11724,
#Partially deleted in new
chr5	42800818	42811892	chr5:42800818-42811892	1	-	42801018	42808353	789624	3	513,216,57,	0,7332,11017,
#Partially deleted in new
chr5	42800927	42808366	chr5:42800927-42808366	0	-	42800927	42800927	8553170	3	404,118,216,	0,3728,7223,
#Partially deleted in new
chr5	42800933	42887392	chr5:42800933-42887392	0	-	42800933	42808353	789624	5	398,118,213,216,102,	0,3722,5962,7217,86357,
#Partially deleted in new
chr5	42801104	42811893	chr5:42801104-42811893	0	-	42801104	42801104	8553170	4	227,213,216,58,	0,5791,7046,10731,
#Partially deleted in new
chr5	42801199	42807298	chr5:42801199-42807298	0	-	42801199	42801199	8553170	3	132,118,403,	0,3456,5696,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	42801237	42811893	chr5:42801237-42811893	0	-	42801237	42808353	789624	6	94,118,213,216,88,58,	0,3418,5658,6913,9453,10598,
#Partially deleted in new
chr5	42804668	42808405	chr5:42804668-42808405	0	-	42804668	42804668	8553170	3	105,213,255,	0,2227,3482,
#Deleted in new
chr5	42806393	42806997	chr5:42806393-42806997	3	+	42806393	42806393	8553170	1	604,	0,
#Partially deleted in new
chr5	42806582	42811892	chr5:42806582-42811892	0	-	42806582	42806582	8553170	3	526,216,57,	0,1568,5253,
#Partially deleted in new
chr5	42806582	42811889	chr5:42806582-42811889	0	-	42806582	42806582	8553170	2	526,54,	0,5253,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	42806901	42811892	chr5:42806901-42811892	0	-	42806901	42806901	8553170	4	207,86,216,57,	0,702,1249,4934,
#Partially deleted in new
chr5	42807817	42811892	chr5:42807817-42811892	0	-	42807817	42807817	8553170	2	549,57,	0,4018,
#Deleted in new
chr5	42892318	42892817	chr5:42892318-42892817	7	-	42892318	42892318	16724991	1	499,	0,
#Deleted in new
chr5	42897261	42897832	chr5:42897261-42897832	7	-	42897261	42897261	16724991	1	571,	0,
#Deleted in new
chr5	42908207	42908667	chr5:42908207-42908667	7	-	42908207	42908207	16724991	1	460,	0,
#Deleted in new
chr5	42917413	42917984	chr5:42917413-42917984	7	+	42917413	42917413	16724991	1	571,	0,
#Deleted in new
chr5	42972623	42973092	chr5:42972623-42973092	7	+	42972623	42972623	16724991	1	469,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	43006732	43007543	chr5:43006732-43007543	3	-	43006732	43006732	8553170	1	811,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	43014413	43018724	chr5:43014413-43018724	2	-	43014413	43014413	789624	2	737,1651,	0,2660,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	43014733	43018811	chr5:43014733-43018811	1	-	43014733	43014733	789624	3	417,116,1738,	0,1628,2340,
#Partially deleted in new
chr5	43014735	43067419	chr5:43014735-43067419	0	-	43014735	43014735	789624	3	415,71,122,	0,52351,52562,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	43018428	43024247	chr5:43018428-43024247	3	+	43018428	43018428	8553170	3	244,179,49,	0,5490,5770,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	43018482	43024234	chr5:43018482-43024234	0	+	43018482	43018482	8553170	3	190,81,36,	0,753,5716,
#Deleted in new
chr5	43033715	43034635	chr5:43033715-43034635	3	+	43033715	43033715	8553170	1	920,	0,
#Deleted in new
chr5	43039080	43040345	chr5:43039080-43040345	1	-	43039464	43040046	789624	1	1265,	0,
#Deleted in new
chr5	43039232	43043170	chr5:43039232-43043170	3	-	43039464	43040046	789624	2	2119,115,	0,3823,
#Partially deleted in new
chr5	43041574	43045264	chr5:43041574-43045264	3	+	43041574	43041574	8553170	3	300,96,822,	0,1897,2868,
#Partially deleted in new
chr5	43041756	43044886	chr5:43041756-43044886	1	+	43041756	43041756	8553170	3	118,96,188,	0,1715,2942,
#Partially deleted in new
chr5	43042092	43045390	chr5:43042092-43045390	0	+	43042092	43042092	8553170	2	1475,948,	0,2350,
#Partially deleted in new
chr5	43042132	43045268	chr5:43042132-43045268	0	+	43042132	43042132	5263520	2	1435,876,	0,2260,
#Partially deleted in new
chr5	43042132	43045268	chr5:43042132-43045268	0	+	43042132	43042132	8553170	2	1435,570,	0,2566,
#Deleted in new
chr5	43061394	43062441	chr5:43061394-43062441	3	+	43061394	43061394	8553170	1	1047,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	43065175	43080343	chr5:43065175-43080343	0	+	43065175	43065175	8553170	3	58,248,444,	0,2794,14724,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	43067580	43093558	chr5:43067580-43093558	0	+	43067580	43067580	789624	3	206,248,536,	0,389,25442,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	43068050	43080503	chr5:43068050-43080503	0	+	43068050	43068050	8553170	2	167,298,	0,12155,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	43068056	43122147	chr5:43068056-43122147	0	+	43119922	43122147	789624	4	161,184,129,109,	0,48390,51866,53982,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	43068115	43099338	chr5:43068115-43099338	0	+	43068115	43068115	8553170	3	102,55,319,	0,11784,30904,
#Partially deleted in new
chr5	43120882	43161773	chr5:43120882-43161773	0	+	43122053	43161773	789624	6	241,139,102,145,358,65,	0,1156,2326,18282,40366,40826,
#Partially deleted in new
chr5	43120917	43175734	chr5:43120917-43175734	0	+	43122053	43161734	789624	8	206,139,102,145,365,223,131,1288,	0,1121,2291,18247,40331,40791,52400,53529,
#Partially deleted in new
chr5	43120919	43161368	chr5:43120919-43161368	0	+	43120919	43120919	8553170	4	204,139,102,120,	0,1119,2289,40329,
#Partially deleted in new
chr5	43121507	43175288	chr5:43121507-43175288	1	+	43122053	43175133	789624	7	21,139,102,145,683,131,842,	0,531,1701,17657,39741,51810,52939,
#Partially deleted in new
chr5	43121532	43161332	chr5:43121532-43161332	0	+	43122053	43161332	789624	5	36,134,102,145,84,	0,511,1676,17632,39716,
#Partially deleted in new
chr5	43121535	43174715	chr5:43121535-43174715	0	+	43122053	43161274	789624	6	33,134,102,683,131,269,	0,508,1673,39713,51782,52911,
#Partially deleted in new
chr5	43121539	43175719	chr5:43121539-43175719	1	+	43122053	43175133	789624	8	29,139,102,145,358,223,131,1273,	0,499,1669,17625,39709,40169,51778,52907,
#Partially deleted in new
chr5	43121595	43176324	chr5:43121595-43176324	3	+	43122053	43175133	789624	8	233,139,102,145,358,223,131,1878,	0,443,1613,17569,39653,40113,51722,52851,
#Partially deleted in new
chr5	43121597	43176247	chr5:43121597-43176247	1	+	43122053	43175133	789624	7	580,102,145,358,223,131,1801,	0,1611,17567,39651,40111,51720,52849,
#Partially deleted in new
chr5	43121683	43161294	chr5:43121683-43161294	0	+	43122053	43161294	789624	5	145,134,102,145,46,	0,360,1525,17481,39565,
#Partially deleted in new
chr5	43122038	43176244	chr5:43122038-43176244	1	+	43122053	43175490	789624	3	139,42,789,	0,1170,53417,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	43122088	43125046	chr5:43122088-43125046	0	+	43122088	43122088	8553170	2	89,1838,	0,1120,
#Partially deleted in new
chr5	43143361	43143514	chr5:43143361-43143514	7	-	43143361	43143361	16724991	1	153,	0,
#Partially deleted in new
chr5	43173131	43174667	chr5:43173131-43174667	0	+	43173131	43173131	8553170	2	317,221,	0,1315,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	43192070	43245330	chr5:43192070-43245330	0	+	43192070	43192070	8553170	3	341,131,249,	0,48189,53011,
#Partially deleted in new
chr5	43192224	43280850	chr5:43192224-43280850	3	+	43245775	43280729	789624	4	187,986,269,871,	0,52857,84832,87755,
#Partially deleted in new
chr5	43192851	43280848	chr5:43192851-43280848	1	+	43245775	43280729	789624	4	805,986,269,869,	0,52230,84205,87128,
#Deleted in new
chr5	43206708	43207811	chr5:43206708-43207811	7	+	43206708	43206708	16724991	1	1103,	0,
#Deleted in new
chr5	43225505	43225813	chr5:43225505-43225813	7	-	43225505	43225505	16724991	1	308,	0,
#Deleted in new
chr5	43231811	43233173	chr5:43231811-43233173	7	-	43231811	43231811	16724991	1	1362,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	43287600	43289725	chr5:43287600-43289725	3	+	43287600	43287600	8553170	1	2125,	0,
#Partially deleted in new
chr5	43289394	43313493	chr5:43289394-43313493	1	-	43291130	43298965	0	11	1826,164,126,107,171,166,165,126,458,59,138,	0,3079,3453,4661,5296,6357,7607,8614,9123,18371,23961,
#Partially deleted in new
chr5	43289394	43313512	chr5:43289394-43313512	3	-	43291130	43298965	0	10	1826,164,126,107,171,166,165,126,458,157,	0,3079,3453,4661,5296,6357,7607,8614,9123,23961,
#Deleted in new
chr5	43289394	43290839	chr5:43289394-43290839	1	+	43289394	43289394	8553170	2	271,372,	0,1073,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	43293733	43294852	chr5:43293733-43294852	0	-	43293733	43293733	8553170	2	429,162,	0,957,
#Deleted in new
chr5	43294412	43295857	chr5:43294412-43295857	0	-	43294412	43294412	8553170	2	449,106,	0,1339,
#Partially deleted in new
chr5	43298143	43313473	chr5:43298143-43313473	0	-	43298143	43298143	8553170	2	832,118,	0,15212,
#Partially deleted in new
chr5	43298445	43313474	chr5:43298445-43313474	0	-	43298445	43298445	8553170	3	530,59,119,	0,9320,14910,
#Partially deleted in new
chr5	43298678	43313224	chr5:43298678-43313224	0	-	43298678	43298965	789624	2	297,203,	0,14343,
#Partially deleted in new
chr5	43348328	43348672	chr5:43348328-43348672	5	+	43348328	43348328	16724991	1	344,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	43376644	43412375	chr5:43376644-43412375	0	-	43381859	43412316	789624	4	840,252,127,123,	0,5156,11705,35608,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	43379192	43412391	chr5:43379192-43412391	3	-	43381859	43412316	789624	3	2860,127,139,	0,9157,33060,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	43380891	43397264	chr5:43380891-43397264	1	-	43381859	43388399	789624	3	1161,127,230,	0,7458,16143,
#Partially deleted in new
chr5	43388021	43412374	chr5:43388021-43412374	0	-	43388021	43388021	8553170	2	455,122,	0,24231,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	43444251	43483836	chr5:43444251-43483836	3	-	43446221	43453969	789624	5	2306,386,145,98,15,	0,9406,31862,35638,39570,
#Partially deleted in new
chr5	43444669	43483885	chr5:43444669-43483885	1	-	43446221	43453969	789624	3	1888,386,64,	0,8988,39152,
#Partially deleted in new
chr5	43445237	43483891	chr5:43445237-43483891	1	-	43446221	43453969	789624	4	1320,386,151,70,	0,8420,9217,38584,
#Partially deleted in new
chr5	43445892	43483893	chr5:43445892-43483893	0	-	43445892	43445892	8553170	3	379,178,72,	0,487,37929,
#Partially deleted in new
chr5	43445978	43483865	chr5:43445978-43483865	1	-	43446221	43479895	789624	3	579,98,44,	0,33911,37843,
#Partially deleted in new
chr5	43446341	43483857	chr5:43446341-43483857	0	-	43446341	43453969	789624	4	216,386,98,36,	0,7316,33548,37480,
#Partially deleted in new
chr5	43483958	43488440	chr5:43483958-43488440	0	+	43483958	43483958	8553170	2	43,397,	0,4085,
#Partially deleted in new
chr5	43484071	43509356	chr5:43484071-43509356	3	+	43484071	43484071	8553170	3	230,99,153,	0,3972,25132,
#Partially deleted in new
chr5	43486700	43515145	chr5:43486700-43515145	3	-	43486914	43509339	789624	13	411,41,99,95,171,70,92,124,96,647,90,231,340,	0,1208,3930,5514,6019,6842,7809,15671,16964,19047,21876,22444,28105,
#Partially deleted in new
chr5	43490328	43494605	chr5:43490328-43494605	0	-	43490328	43490328	8553170	5	401,95,171,70,96,	0,1886,2391,3214,4181,
#Partially deleted in new
chr5	43493548	43506006	chr5:43493548-43506006	0	-	43494576	43506006	789624	4	64,92,96,259,	0,961,10116,12199,
#Deleted in new
chr5	43495072	43496454	chr5:43495072-43496454	7	-	43495072	43495072	16724991	1	1382,	0,
#Partially deleted in new
chr5	43503664	43515024	chr5:43503664-43515024	0	-	43503664	43506337	789624	3	96,647,219,	0,2083,11141,
#Partially deleted in new
chr5	43505549	43515078	chr5:43505549-43515078	0	-	43505549	43505549	8553170	3	845,90,273,	0,3027,9256,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	43511057	43521811	chr5:43511057-43521811	3	+	43511057	43511057	8553170	3	242,76,254,	0,3135,10500,
#Partially deleted in new
chr5	43526266	43557079	chr5:43526266-43557079	1	-	43527375	43556846	0	11	1203,94,55,118,107,126,112,113,186,170,498,	0,3519,7471,8586,9267,10552,12657,16737,21461,29563,30315,
#Partially deleted in new
chr5	43527091	43557093	chr5:43527091-43557093	1	-	43527375	43556846	0	11	378,94,55,118,107,126,112,113,186,170,275,	0,2694,6646,7761,8442,9727,11832,15912,20636,28738,29727,
#Partially deleted in new
chr5	43527092	43557695	chr5:43527092-43557695	3	-	43527375	43555928	0	11	377,94,55,118,107,126,112,113,186,170,356,	0,2693,6645,7760,8441,9726,11831,15911,20635,28737,30247,
#Partially deleted in new
chr5	43527092	43533792	chr5:43527092-43533792	0	-	43527457	43533792	789624	3	377,83,55,	0,2704,6645,
#Partially deleted in new
chr5	43527112	43557077	chr5:43527112-43557077	1	-	43527428	43556846	789624	10	357,55,118,107,126,112,113,186,170,259,	0,6625,7740,8421,9706,11811,15891,20615,28717,29706,
#Partially deleted in new
chr5	43527144	43557053	chr5:43527144-43557053	0	-	43536877	43556846	789624	10	325,94,55,118,107,126,113,186,170,472,	0,2641,6593,7708,8389,9674,15859,20583,28685,29437,
#Partially deleted in new
chr5	43536853	43557734	chr5:43536853-43557734	0	-	43536853	43555928	789624	6	91,112,113,186,170,34,	0,2070,6150,10874,18976,20847,
#Partially deleted in new
chr5	43538928	43556378	chr5:43538928-43556378	0	-	43538928	43555928	789624	5	107,113,186,170,176,	0,4075,8799,16901,17274,
#Partially deleted in new
chr5	43543060	43557077	chr5:43543060-43557077	0	-	43543060	43543089	789624	3	56,186,259,	0,4667,13758,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	43547727	43557758	chr5:43547727-43557758	0	-	43547727	43555928	789624	3	186,132,408,	0,8102,9623,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	43571593	43603104	chr5:43571593-43603104	1	-	43571593	43571593	789624	3	4342,100,327,	0,11873,31184,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	43575777	43603176	chr5:43575777-43603176	0	-	43575777	43575777	8553170	2	158,399,	0,27000,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	43577641	43603063	chr5:43577641-43603063	3	-	43577641	43577641	8553170	3	1559,100,286,	0,5825,25136,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	43578336	43602937	chr5:43578336-43602937	0	-	43578336	43578336	8553170	3	243,100,160,	0,5130,24441,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	43579129	43603063	chr5:43579129-43603063	0	-	43579129	43579129	8553170	3	71,100,286,	0,4337,23648,
#Partially deleted in new
chr5	43586366	43587543	chr5:43586366-43587543	3	-	43586366	43586366	8553170	1	1177,	0,
#Partially deleted in new
chr5	43586917	43588223	chr5:43586917-43588223	7	-	43586917	43586917	16724991	2	878,116,	0,1190,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	43588640	43603230	chr5:43588640-43603230	0	-	43588640	43588640	8553170	2	126,453,	0,14137,
#Partially deleted in new
chr5	43602691	43616063	chr5:43602691-43616063	0	+	43609195	43616063	789624	4	58,204,230,216,	0,6451,10216,13156,
#Partially deleted in new
chr5	43602704	43619084	chr5:43602704-43619084	0	+	43609195	43619084	789624	5	49,204,230,218,53,	0,6438,10203,13143,16327,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr5	43602722	43707405	chr5:43602722-43707405	3	+	43609195	43704404	0	22	168,204,230,218,88,89,188,134,192,154,162,111,146,196,234,161,180,160,82,119,116,3151,	0,6420,10185,13125,16309,21309,25477,41469,41888,42634,46424,47754,49016,50295,53117,53930,56448,72788,75002,97396,99898,101532,
#Partially deleted in new
chr5	43603126	43705232	chr5:43603126-43705232	1	+	43609195	43704404	0	22	168,204,230,218,88,89,188,134,192,154,162,111,146,196,234,161,180,160,82,119,116,978,	0,6016,9781,12721,15905,20905,25073,41065,41484,42230,46020,47350,48612,49891,52713,53526,56044,72384,74598,96992,99494,101128,
#Partially deleted in new
chr5	43603198	43705486	chr5:43603198-43705486	1	+	43615859	43704404	789624	21	96,230,218,88,89,188,134,192,154,162,111,146,196,234,161,180,160,82,119,116,1232,	0,9709,12649,15833,20833,25001,40993,41412,42158,45948,47278,48540,49819,52641,53454,55972,72312,74526,96920,99422,101056,
#Partially deleted in new
chr5	43613090	43616034	chr5:43613090-43616034	0	+	43615859	43616034	789624	2	560,187,	0,2757,
#Deleted in new
chr5	43644744	43645665	chr5:43644744-43645665	0	+	43644744	43644744	8553170	2	58,309,	0,612,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	43645356	43648451	chr5:43645356-43648451	0	+	43645356	43647943	789624	2	154,528,	0,2567,
#Deleted in new
chr5	43651783	43653580	chr5:43651783-43653580	0	+	43651783	43651783	8553170	2	101,563,	0,1234,
#Deleted in new
chr5	43666765	43667232	chr5:43666765-43667232	7	-	43666765	43666765	16724991	1	467,	0,
#Partially deleted in new
chr5	43677778	43704744	chr5:43677778-43704744	0	+	43677778	43702627	789624	3	28,116,490,	0,24842,26476,
#Partially deleted in new
chr5	43874366	43886628	chr5:43874366-43886628	3	+	43874366	43874366	8553170	2	224,115,	0,12147,
#Partially deleted in new
chr5	44066623	44066731	chr5:44066623-44066731	3	-	44066623	44066623	8553170	1	108,	0,
#Partially deleted in new
chr5	44303543	44388797	chr5:44303543-44388797	3	-	44304994	44388682	0	3	1649,104,440,	0,6883,84814,
#Deleted in new
chr5	44388484	44389706	chr5:44388484-44389706	0	-	44388484	44388682	789624	2	572,559,	0,663,
#Partially deleted in new
chr5	44388731	44413989	chr5:44388731-44413989	3	+	44388731	44388731	789624	3	182,113,1599,	0,6505,23659,
#Partially deleted in new
chr5	44495617	44510240	chr5:44495617-44510240	3	-	44495617	44495617	789624	3	176,111,297,	0,4923,14326,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	44500631	44510282	chr5:44500631-44510282	0	-	44500631	44500631	8553170	3	20,180,339,	0,3661,9312,
#Deleted in new
chr5	44698430	44700808	chr5:44698430-44700808	3	-	44698430	44698430	8553170	2	283,166,	0,2212,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	44716192	44716486	chr5:44716192-44716486	3	+	44716192	44716192	8553170	1	294,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	44744899	44808777	chr5:44744899-44808777	3	-	44744899	44744899	789624	3	505,97,136,	0,1042,63742,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	44745008	44808742	chr5:44745008-44808742	1	-	44745008	44745008	789624	4	396,97,65,101,	0,933,32028,63633,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	44745137	44808741	chr5:44745137-44808741	0	-	44745137	44745137	8553170	3	271,97,100,	0,804,63504,
#Partially deleted in new
chr5	44745996	44808759	chr5:44745996-44808759	1	-	44745996	44745996	8553170	4	42,70,65,118,	0,1630,31040,62645,
#Partially deleted in new
chr5	44775693	44808666	chr5:44775693-44808666	1	-	44775693	44775693	8553170	3	482,65,25,	0,1343,32948,
#Partially deleted in new
chr5	44776755	44808759	chr5:44776755-44808759	0	-	44776755	44776755	8553170	3	573,84,118,	0,1153,31886,
#Partially deleted in new
chr5	44777203	44808736	chr5:44777203-44808736	0	-	44777203	44777203	8553170	2	125,95,	0,31438,
#Deleted in new
chr5	44808924	44815522	chr5:44808924-44815522	3	+	44808962	44815202	0	5	639,146,106,177,610,	0,2084,2990,4181,5988,
#Deleted in new
chr5	44809842	44815066	chr5:44809842-44815066	0	+	44809842	44809842	8553170	5	150,146,106,177,154,	0,1166,2072,3263,5070,
#Deleted in new
chr5	44811984	44813629	chr5:44811984-44813629	0	+	44811984	44811984	8553170	2	36,524,	0,1121,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	44815218	44820428	chr5:44815218-44820428	0	+	44815218	44815218	8553170	2	345,3986,	0,1224,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	44826075	44828592	chr5:44826075-44828592	3	+	44826075	44826075	8553170	1	2517,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	45035198	45098647	chr5:45035198-45098647	3	+	45035198	45035198	8553170	2	78,742,	0,62707,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	45254949	45696334	chr5:45254949-45696334	3	-	45261920	45696093	0	8	7861,165,241,147,219,162,424,666,	0,12139,48649,98150,141542,206896,390235,440719,
#Partially deleted in new
chr5	45259456	45480136	chr5:45259456-45480136	0	-	45259456	45259456	8553170	7	3354,165,241,147,219,162,12,	0,7632,44142,93643,137035,202389,220668,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	45557918	45559986	chr5:45557918-45559986	7	+	45557918	45557918	16724991	1	2068,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	45574589	45576612	chr5:45574589-45576612	7	+	45574589	45574589	16724991	1	2023,	0,
#Partially deleted in new
chr5	45617327	45645261	chr5:45617327-45645261	0	-	45617327	45617327	8553170	2	92,77,	0,27857,
#Partially deleted in new
chr5	45641700	45696498	chr5:45641700-45696498	1	-	45645145	45696093	789624	2	3908,830,	0,53968,
#Partially deleted in new
chr5	45695074	45695725	chr5:45695074-45695725	0	-	45695074	45695074	8553170	2	67,57,	0,594,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	45890215	45895970	chr5:45890215-45895970	3	+	45890215	45890215	8553170	2	426,137,	0,5618,
#Partially deleted in new
chr5	50396191	50441367	chr5:50396191-50441367	3	-	50399272	50441151	789624	9	3099,55,34,277,128,89,187,84,328,	0,3667,6094,6986,9533,14685,15005,31952,44848,
#Partially deleted in new
chr5	50398026	50411998	chr5:50398026-50411998	0	-	50398026	50398026	8553170	7	1264,55,34,277,128,89,802,	0,1832,4259,5151,7698,12850,13170,
#Partially deleted in new
chr5	50398676	50441350	chr5:50398676-50441350	1	-	50399272	50441151	789624	9	614,55,34,277,128,89,25,84,311,	0,1182,3609,4501,7048,12200,12520,29467,42363,
#Partially deleted in new
chr5	50398938	50428727	chr5:50398938-50428727	1	-	50399272	50428189	789624	9	352,55,34,277,128,89,187,84,269,	0,920,3347,4239,6786,11938,12258,29205,29520,
#Partially deleted in new
chr5	50403255	50443248	chr5:50403255-50443248	0	-	50403255	50403255	8553170	7	199,128,89,187,84,33,59,	0,2469,7621,7941,24888,39696,39934,
#Deleted in new
chr5	50603228	50603511	chr5:50603228-50603511	7	+	50603228	50603228	16724991	1	283,	0,
#Partially deleted in new
chr5	50633123	50633602	chr5:50633123-50633602	7	+	50633123	50633123	16724991	1	479,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	50662858	50663266	chr5:50662858-50663266	3	-	50662858	50662858	8553170	1	408,	0,
#Partially deleted in new
chr5	50665898	50778126	chr5:50665898-50778126	0	+	50665898	50665898	8553170	7	171,102,55,38,78,95,58,	0,1186,2172,84252,95922,97249,112170,
#Partially deleted in new
chr5	50665898	50842068	chr5:50665898-50842068	1	+	50667095	50842068	789624	27	171,102,55,38,90,71,78,95,61,91,67,126,565,51,96,93,126,66,68,49,113,73,70,74,70,85,103,	0,1186,2172,84252,93744,94393,95922,97249,112170,112661,122624,128308,128954,131083,131239,149533,155314,156436,159009,160856,162045,162413,163993,166882,168080,169032,176067,
#Partially deleted in new
chr5	50665898	50842342	chr5:50665898-50842342	0	+	50665898	50665898	8553170	25	171,102,55,38,78,95,61,91,67,126,565,51,96,93,126,66,68,49,113,73,70,74,70,85,377,	0,1186,2172,84252,95922,97249,112170,112661,122624,128308,128954,131083,131239,149533,155314,156436,159009,160856,162045,162413,163993,166882,168080,169032,176067,
#Partially deleted in new
chr5	50665900	50761887	chr5:50665900-50761887	0	+	50667095	50759646	789624	6	169,102,55,90,71,67,	0,1184,2170,93742,94391,95920,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	50665972	50761902	chr5:50665972-50761902	0	+	50667095	50757127	789624	7	97,102,38,97,90,71,82,	0,1112,84178,91146,93670,94319,95848,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	50665989	50761902	chr5:50665989-50761902	0	+	50667095	50757210	789624	8	80,102,55,38,97,90,71,82,	0,1095,2081,84161,91129,93653,94302,95831,
#Partially deleted in new
chr5	50666373	50759690	chr5:50666373-50759690	0	+	50667095	50759690	789624	5	89,102,55,38,48,	0,711,1697,83777,93269,
#Partially deleted in new
chr5	50666687	50778114	chr5:50666687-50778114	0	+	50667095	50778114	789624	4	310,102,55,46,	0,397,1383,111381,
#Deleted in new
chr5	50666760	50668128	chr5:50666760-50668128	0	+	50666760	50666760	8553170	2	426,58,	0,1310,
#Deleted in new
chr5	50666818	50669517	chr5:50666818-50669517	0	+	50666818	50666818	8553170	3	179,102,1447,	0,266,1252,
#Partially deleted in new
chr5	50666937	50846522	chr5:50666937-50846522	3	+	50667095	50842068	789624	26	249,55,38,90,71,78,95,61,91,67,126,565,51,96,93,126,66,68,49,113,73,70,74,70,85,4557,	0,1133,83213,92705,93354,94883,96210,111131,111622,121585,127269,127915,130044,130200,148494,154275,155397,157970,159817,161006,161374,162954,165843,167041,167993,175028,
#Partially deleted in new
chr5	50666937	50834022	chr5:50666937-50834022	1	+	50794210	50834022	789624	24	249,55,38,90,71,78,95,61,91,67,126,565,51,96,93,66,68,49,113,73,70,74,7,38,	0,1133,83213,92705,93354,94883,96210,111131,111622,121585,127269,127915,130044,130200,148494,155397,157970,159817,161006,161374,162954,165843,166482,167047,
#Partially deleted in new
chr5	50666966	50745032	chr5:50666966-50745032	1	+	50667095	50744763	789624	3	220,55,297,	0,1104,77769,
#Partially deleted in new
chr5	50666966	50763242	chr5:50666966-50763242	0	+	50667095	50761837	789624	6	220,55,38,90,78,95,	0,1104,83184,92676,94854,96181,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	50666966	50744828	chr5:50666966-50744828	1	+	50667095	50744763	789624	5	220,55,107,121,93,	0,1104,72013,74864,77769,
#Partially deleted in new
chr5	50666978	50842341	chr5:50666978-50842341	1	+	50667095	50842068	789624	25	208,55,38,90,71,78,95,61,91,67,126,565,51,96,93,66,68,49,113,73,70,74,70,85,376,	0,1092,83172,92664,93313,94842,96169,111090,111581,121544,127228,127874,130003,130159,148453,155356,157929,159776,160965,161333,162913,165802,167000,167952,174987,
#Partially deleted in new
chr5	50666980	50760366	chr5:50666980-50760366	0	+	50667095	50760366	789624	5	206,55,38,90,75,	0,1090,83170,92662,93311,
#Partially deleted in new
chr5	50667003	50763261	chr5:50667003-50763261	0	+	50667095	50759687	789624	6	183,38,90,71,78,114,	0,83147,92639,93288,94817,96144,
#Partially deleted in new
chr5	50667088	50842293	chr5:50667088-50842293	0	+	50667095	50794298	789624	25	98,55,38,90,71,78,95,61,91,126,565,51,96,93,126,66,68,49,113,73,70,74,70,85,328,	0,982,83062,92554,93203,94732,96059,110980,111471,127118,127764,129893,130049,148343,154124,155246,157819,159666,160855,161223,162803,165692,166890,167842,174877,
#Partially deleted in new
chr5	50667556	50843374	chr5:50667556-50843374	1	+	50667573	50842068	789624	26	45,55,38,90,71,78,95,61,91,67,126,565,51,96,93,126,66,68,49,113,73,70,74,70,85,1409,	0,514,82594,92086,92735,94264,95591,110512,111003,120966,126650,127296,129425,129581,147875,153656,154778,157351,159198,160387,160755,162335,165224,166422,167374,174409,
#Partially deleted in new
chr5	50667883	50761900	chr5:50667883-50761900	0	+	50667883	50667883	8553170	5	242,38,90,71,80,	0,82267,91759,92408,93937,
#Partially deleted in new
chr5	50667892	50842342	chr5:50667892-50842342	0	+	50667892	50667892	8553170	23	233,38,90,78,95,61,91,67,126,565,51,96,93,66,68,49,113,73,70,74,70,174,377,	0,82258,91750,93928,95255,110176,110667,120630,126314,126960,129089,129245,147539,154442,157015,158862,160051,160419,161999,164888,166086,166949,174073,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	50858759	50860020	chr5:50858759-50860020	3	-	50858759	50858759	8553170	2	615,179,	0,1082,
#Deleted in new
chr5	50903607	50903743	chr5:50903607-50903743	7	+	50903607	50903607	16724991	1	136,	0,
#Partially deleted in new
chr5	50929483	50934521	chr5:50929483-50934521	3	-	50929483	50929483	8553170	3	125,198,59,	0,4129,4979,
#Deleted in new
chr5	50965686	50967008	chr5:50965686-50967008	3	-	50965686	50965686	8553170	2	446,123,	0,1199,
#Deleted in new
chr5	50969216	50970167	chr5:50969216-50970167	3	-	50969216	50969216	789624	2	361,245,	0,706,
#Deleted in new
chr5	50969216	50969967	chr5:50969216-50969967	1	-	50969216	50969216	8553170	3	107,73,45,	0,288,706,
#Deleted in new
chr5	50969659	50970187	chr5:50969659-50970187	3	+	50969659	50969659	8553170	2	295,137,	0,391,
#Deleted in new
chr5	51101171	51101643	chr5:51101171-51101643	7	-	51101171	51101171	16724991	1	472,	0,
#Deleted in new
chr5	51167540	51167647	chr5:51167540-51167647	3	-	51167540	51167540	8553170	1	107,	0,
#Deleted in new
chr5	51275252	51275734	chr5:51275252-51275734	7	+	51275252	51275252	16724991	1	482,	0,
#Deleted in new
chr5	51372735	51379497	chr5:51372735-51379497	1	-	51372735	51372735	789624	1	6762,	0,
#Deleted in new
chr5	51377067	51383332	chr5:51377067-51383332	1	-	51377067	51377067	8553170	2	2008,359,	0,5906,
#Deleted in new
chr5	51378574	51379675	chr5:51378574-51379675	3	-	51378574	51378574	8553170	2	501,31,	0,1070,
#Deleted in new
chr5	51383390	51394738	chr5:51383390-51394738	3	+	51383671	51393610	789624	6	309,190,260,287,168,1245,	0,1150,4099,6255,7883,10103,
#Deleted in new
chr5	51383671	51393610	chr5:51383671-51393610	1	+	51383671	51393610	789624	6	28,190,260,287,99,117,	0,869,3818,5974,7671,9822,
#Deleted in new
chr5	51386203	51393567	chr5:51386203-51393567	0	+	51386203	51386203	8553170	5	423,260,287,168,74,	0,1286,3442,5070,7290,
#Deleted in new
chr5	51409616	51410205	chr5:51409616-51410205	7	-	51409616	51409616	16724991	1	589,	0,
#Deleted in new
chr5	51427995	51428427	chr5:51427995-51428427	7	-	51427995	51427995	16724991	1	432,	0,
#Partially deleted in new
chr5	51451157	51462089	chr5:51451157-51462089	3	+	51451157	51451157	8553170	3	119,56,766,	0,3957,10166,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	51886687	51886769	chr5:51886687-51886769	7	+	51886687	51886687	16724991	1	82,	0,
#Partially deleted in new
chr5	51930807	51932036	chr5:51930807-51932036	7	+	51930807	51930807	16724991	2	195,723,	0,506,
#Partially deleted in new
chr5	51963991	51964445	chr5:51963991-51964445	3	+	51963991	51963991	8553170	1	454,	0,
#Partially deleted in new
chr5	52008030	52043909	chr5:52008030-52043909	1	+	52008030	52008030	789624	4	48,35,32,292,	0,1784,3540,35587,
#Partially deleted in new
chr5	52009814	52080987	chr5:52009814-52080987	3	+	52009814	52009814	8553170	4	35,32,107,245,	0,1756,69069,70928,
#Deleted in new
chr5	52282566	52282859	chr5:52282566-52282859	7	+	52282566	52282566	16724991	1	293,	0,
#Deleted in new
chr5	52579554	52581106	chr5:52579554-52581106	7	-	52579554	52579554	16724991	1	1552,	0,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr5	52787895	52959210	chr5:52787895-52959210	3	+	52788353	52952451	0	29	519,121,113,89,112,128,149,151,166,74,145,146,144,258,131,167,137,111,210,81,77,90,103,114,102,105,93,117,6804,	0,61469,73551,76867,77075,77794,93977,99919,105779,109559,110343,117867,121002,122266,127568,130836,132436,134881,137382,139688,141729,144151,145998,149505,151694,151944,157047,159449,164511,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	52787939	52804046	chr5:52787939-52804046	3	+	52800394	52801840	0	3	475,1236,2638,	0,11945,13469,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	52787946	52825210	chr5:52787946-52825210	0	+	52787946	52787946	8553170	2	468,898,	0,36366,
#Partially deleted in new
chr5	52787952	52801834	chr5:52787952-52801834	0	+	52787952	52787952	8553170	2	462,426,	0,13456,
#Partially deleted in new
chr5	52863972	52887891	chr5:52863972-52887891	0	+	52863972	52863972	8553170	6	46,89,112,128,149,77,	0,790,998,1717,17900,23842,
#Partially deleted in new
chr5	52863972	52867218	chr5:52863972-52867218	0	+	52863972	52863972	8553170	5	46,89,112,128,181,	0,790,998,1717,3065,
#Partially deleted in new
chr5	52864970	52882927	chr5:52864970-52882927	0	+	52864970	52864970	8553170	4	112,128,149,48,	0,719,16902,17909,
#Deleted in new
chr5	52889665	52889954	chr5:52889665-52889954	7	+	52889665	52889665	16724991	1	289,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr5	52901778	52952512	chr5:52901778-52952512	0	+	52901778	52901778	8553170	18	4130,144,258,131,167,137,111,210,81,77,90,103,114,102,105,93,117,106,	0,7119,8383,13685,16953,18553,20998,23499,25805,27846,30268,32115,35622,37811,38061,43164,45566,50628,
#Deleted in new
chr5	52903907	52904478	chr5:52903907-52904478	7	+	52903907	52903907	16724991	1	571,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	52931151	52956491	chr5:52931151-52956491	0	+	52931151	52931151	8553170	7	2845,114,102,105,93,117,4085,	0,6249,8438,8688,13791,16193,21255,
#Partially deleted in new
chr5	52932418	52990278	chr5:52932418-52990278	3	-	52932418	52932418	8553170	5	118,83,132,73,189,	0,16406,45849,55785,57671,
#Partially deleted in new
chr5	52932475	52990278	chr5:52932475-52990278	0	-	52932475	52932475	8553170	5	61,83,148,73,189,	0,16349,45776,55728,57614,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr5	52989325	53094779	chr5:52989325-53094779	3	+	52989468	53090599	789624	30	207,121,110,92,115,128,149,151,166,77,139,146,144,204,137,140,152,111,83,142,93,77,84,103,111,105,114,90,117,4261,	0,37422,52786,55675,59037,59317,62085,66212,66658,68699,70548,71575,73460,75586,76515,77792,80783,82612,83287,83792,85059,85735,85895,89446,91185,92266,94014,97626,100620,101193,
#Partially deleted in new
chr5	52989339	53090834	chr5:52989339-53090834	0	+	52989468	53051436	789624	29	193,121,110,92,115,149,151,166,77,139,146,144,204,137,140,152,111,83,142,93,77,84,103,111,105,114,90,117,316,	0,37408,52772,55661,59023,62071,66198,66644,68685,70534,71561,73446,75572,76501,77778,80769,82598,83273,83778,85045,85721,85881,89432,91171,92252,94000,97612,100606,101179,
#Partially deleted in new
chr5	52989439	53090653	chr5:52989439-53090653	0	+	52989468	53074403	789624	29	93,121,110,92,115,128,149,151,166,77,139,146,144,204,137,140,152,111,83,93,77,84,103,111,105,114,90,117,135,	0,37308,52672,55561,58923,59203,61971,66098,66544,68585,70434,71461,73346,75472,76401,77678,80669,82498,83173,84945,85621,85781,89332,91071,92152,93900,97512,100506,101079,
#Partially deleted in new
chr5	52989439	53090657	chr5:52989439-53090657	0	+	52989468	53065919	789624	30	93,121,110,92,115,128,149,151,166,77,139,146,144,204,178,140,152,111,83,142,93,77,84,103,111,105,114,90,117,139,	0,37308,52672,55561,58923,59203,61971,66098,66544,68585,70434,71461,73346,75472,76360,77678,80669,82498,83173,83678,84945,85621,85781,89332,91071,92152,93900,97512,100506,101079,
#Partially deleted in new
chr5	52989439	53090657	chr5:52989439-53090657	0	+	52989468	53080514	789624	29	93,121,110,92,115,128,149,151,166,77,139,146,144,204,137,140,152,111,83,142,93,77,84,111,105,114,90,117,139,	0,37308,52672,55561,58923,59203,61971,66098,66544,68585,70434,71461,73346,75472,76401,77678,80669,82498,83173,83678,84945,85621,85781,91071,92152,93900,97512,100506,101079,
#Partially deleted in new
chr5	52989439	53090646	chr5:52989439-53090646	0	+	52989468	53042212	789624	29	93,110,92,115,128,149,151,166,77,139,146,144,204,137,140,152,111,83,142,93,77,84,103,111,105,114,90,117,128,	0,52672,55561,58923,59203,61971,66098,66544,68585,70434,71461,73346,75472,76401,77678,80669,82498,83173,83678,84945,85621,85781,89332,91071,92152,93900,97512,100506,101079,
#Deleted in new
chr5	53089015	53089468	chr5:53089015-53089468	3	-	53089015	53089015	8553170	1	453,	0,
#Partially deleted in new
chr5	53095678	53109771	chr5:53095678-53109771	1	-	53107094	53109729	0	6	2989,124,128,145,122,60,	0,4732,6418,11398,12843,14033,
#Partially deleted in new
chr5	53098061	53109759	chr5:53098061-53109759	3	-	53098601	53107174	0	7	606,124,151,128,145,122,509,	0,2349,3297,4035,9015,10460,11189,
#Partially deleted in new
chr5	53098066	53108097	chr5:53098066-53108097	0	-	53098066	53098066	8553170	4	601,1099,128,1021,	0,2344,4030,9010,
#Partially deleted in new
chr5	53098067	53109778	chr5:53098067-53109778	1	-	53107094	53109729	0	7	600,124,151,128,145,122,67,	0,2343,3291,4029,9009,10454,11644,
#Partially deleted in new
chr5	53098070	53109742	chr5:53098070-53109742	1	-	53107094	53109729	0	7	597,77,151,128,145,122,31,	0,2340,3288,4026,9006,10451,11641,
#Partially deleted in new
chr5	53098098	53109762	chr5:53098098-53109762	1	-	53107094	53109729	0	6	613,151,128,145,122,51,	0,3260,3998,8978,10423,11613,
#Partially deleted in new
chr5	53098383	53109777	chr5:53098383-53109777	1	-	53107094	53109729	0	5	284,124,145,122,66,	0,2027,8693,10138,11328,
#Partially deleted in new
chr5	53098539	53109777	chr5:53098539-53109777	1	-	53107094	53109729	0	6	128,124,151,145,122,66,	0,1871,2819,8537,9982,11172,
#Partially deleted in new
chr5	53100452	53110063	chr5:53100452-53110063	1	-	53107094	53109987	789624	6	82,151,128,145,122,79,	0,906,1644,6624,8069,9532,
#Partially deleted in new
chr5	53101125	53109727	chr5:53101125-53109727	0	-	53101125	53101125	8553170	5	384,128,145,122,16,	0,971,5951,7396,8586,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	53109841	53115123	chr5:53109841-53115123	3	+	53109841	53109841	789624	3	307,795,1265,	0,2398,4017,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	53109876	53114197	chr5:53109876-53114197	0	+	53109876	53109876	8553170	2	272,339,	0,3982,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	53109898	53115126	chr5:53109898-53115126	1	+	53109898	53109898	8553170	2	250,2887,	0,2341,
#Partially deleted in new
chr5	53206560	53207176	chr5:53206560-53207176	7	+	53206560	53206560	16724991	1	616,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	53297871	53326565	chr5:53297871-53326565	3	-	53297871	53297871	8553170	5	3775,132,168,157,123,	0,6904,21677,24777,28571,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	53413503	53414260	chr5:53413503-53414260	7	+	53413503	53413503	16724991	2	31,406,	0,351,
#Deleted in new
chr5	53480408	53487134	chr5:53480408-53487134	3	+	53480791	53486033	0	6	468,192,219,225,231,1184,	0,2471,3095,3660,4588,5542,
#Deleted in new
chr5	53480625	53487106	chr5:53480625-53487106	1	+	53480791	53485688	0	6	251,192,219,225,231,1420,	0,2254,2878,3443,4371,5061,
#Deleted in new
chr5	53482693	53484111	chr5:53482693-53484111	0	+	53482693	53482693	8553170	3	378,219,43,	0,810,1375,
#Deleted in new
chr5	53483610	53486090	chr5:53483610-53486090	0	+	53483610	53486033	789624	4	112,225,228,140,	0,458,1389,2340,
#Deleted in new
chr5	53484215	53486092	chr5:53484215-53486092	0	+	53484215	53485688	789624	3	78,228,406,	0,784,1471,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	53560632	53683219	chr5:53560632-53683219	0	+	53560662	53573659	789624	6	128,124,79,173,74,102,	0,12975,42819,85600,97918,122485,
#Partially deleted in new
chr5	53560634	53683340	chr5:53560634-53683340	3	+	53560662	53683221	0	5	126,79,173,74,223,	0,42817,85598,97916,122483,
#Partially deleted in new
chr5	53560634	53683138	chr5:53560634-53683138	0	+	53560662	53604851	789624	6	126,79,89,173,74,21,	0,42817,44172,85598,97916,122483,
#Partially deleted in new
chr5	53560646	53683338	chr5:53560646-53683338	0	+	53560662	53646279	789624	6	114,79,172,173,74,221,	0,42805,44077,85586,97904,122471,
#Partially deleted in new
chr5	53560674	53683338	chr5:53560674-53683338	0	+	53560674	53683130	789624	4	86,79,173,221,	0,42777,85558,122443,
#Partially deleted in new
chr5	53646194	53658789	chr5:53646194-53658789	0	+	53646194	53646194	8553170	2	211,239,	0,12356,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	53776643	53819686	chr5:53776643-53819686	3	-	53776643	53776643	8553170	4	643,164,65,131,	0,7323,8436,42912,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	53777013	53819676	chr5:53777013-53819676	1	-	53777013	53777013	8553170	6	273,110,161,65,140,121,	0,1254,6953,8066,39039,42542,
#Partially deleted in new
chr5	53859165	53860401	chr5:53859165-53860401	7	+	53859165	53859165	16724991	1	1236,	0,
#Partially deleted in new
chr5	53880292	53881051	chr5:53880292-53881051	3	-	53880292	53880292	8553170	1	759,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	53883944	54310582	chr5:53883944-54310582	1	-	53886560	53886638	789624	5	2769,209,60,59,151,	0,229257,270635,423943,426487,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	53884783	54310573	chr5:53884783-54310573	3	-	53886560	54310479	789624	5	1930,209,60,145,142,	0,228418,269796,287000,425648,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	53884783	54310573	chr5:53884783-54310573	1	-	53886560	54310479	789624	6	1924,6,209,60,145,142,	0,182378,228418,269796,287000,425648,
#Partially deleted in new
chr5	53886444	54310415	chr5:53886444-54310415	0	-	53886444	53886444	8553170	5	269,209,60,145,121,	0,226757,268135,285339,423850,
#Partially deleted in new
chr5	53887364	54310576	chr5:53887364-54310576	1	-	53887368	54310479	789624	5	19,209,60,145,145,	0,225837,267215,284419,423067,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	53912019	53912123	chr5:53912019-53912123	3	-	53912019	53912019	8553170	1	104,	0,
#Partially deleted in new
chr5	53951503	53951599	chr5:53951503-53951599	3	-	53951503	53951503	5263520	1	96,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	54048006	54048308	chr5:54048006-54048308	3	-	54048006	54048006	8553170	1	302,	0,
#Partially deleted in new
chr5	54113132	54310576	chr5:54113132-54310576	0	-	54113132	54113132	8553170	4	278,60,145,145,	0,41447,58651,197299,
#Partially deleted in new
chr5	54154390	54310573	chr5:54154390-54310573	0	-	54154390	54154390	8553170	3	249,145,142,	0,17393,156041,
#Deleted in new
chr5	54286193	54286331	chr5:54286193-54286331	3	-	54286193	54286193	8553170	1	138,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	54322880	54401905	chr5:54322880-54401905	2	+	54322880	54322880	8553170	2	43,263,	0,78762,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	54390837	54401829	chr5:54390837-54401829	0	+	54390837	54390837	8553170	3	96,138,187,	0,6159,10805,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	54395350	54415099	chr5:54395350-54415099	1	+	54395350	54395350	8553170	6	67,138,162,223,67,78,	0,1646,5086,6292,13104,19671,
#Partially deleted in new
chr5	54399438	54400033	chr5:54399438-54400033	7	+	54399438	54399438	16724991	2	206,70,	0,525,
#Deleted in new
chr5	54455600	54456384	chr5:54455600-54456384	3	+	54455789	54456242	789624	1	784,	0,
#Partially deleted in new
chr5	54517758	54543273	chr5:54517758-54543273	1	+	54517952	54543180	789624	2	1968,95,	0,25420,
#Partially deleted in new
chr5	54517762	54546585	chr5:54517762-54546585	3	+	54517952	54543432	789624	2	1811,3407,	0,25416,
#Deleted in new
chr5	54517864	54521004	chr5:54517864-54521004	1	+	54517952	54519839	789624	1	3140,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	54643556	54645987	chr5:54643556-54645987	3	+	54643556	54643556	8553170	1	2431,	0,
#Partially deleted in new
chr5	54808209	54872551	chr5:54808209-54872551	7	-	54808209	54808209	16724991	10	786,891,204,231,307,166,181,496,3561,173,	0,1863,2853,3700,24831,32943,48330,58335,60261,64169,
#Deleted in new
chr5	54857271	54858491	chr5:54857271-54858491	7	+	54857271	54857271	16724991	1	1220,	0,
#Deleted in new
chr5	54878237	54878588	chr5:54878237-54878588	7	+	54878237	54878237	16724991	1	351,	0,
#Deleted in new
chr5	54956234	54957846	chr5:54956234-54957846	3	-	54956234	54956234	8553170	2	288,153,	0,1459,
#Deleted in new
chr5	54977863	54985663	chr5:54977863-54985663	3	-	54979331	54985517	789624	3	1572,150,447,	0,4133,7353,
#Deleted in new
chr5	54978486	54985593	chr5:54978486-54985593	1	-	54979331	54985517	789624	2	949,377,	0,6730,
#Partially deleted in new
chr5	54979057	55022671	chr5:54979057-55022671	0	-	54979057	54979057	8553170	3	378,185,44,	0,14489,43570,
#Partially deleted in new
chr5	54985248	55022671	chr5:54985248-55022671	0	-	54985248	54985517	789624	2	712,44,	0,37379,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	55021298	55024542	chr5:55021298-55024542	0	-	55021298	55021298	789624	3	224,85,614,	0,1329,2630,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	55021298	55024299	chr5:55021298-55024299	0	-	55021298	55021298	8553170	4	224,85,200,371,	0,1329,1839,2630,
#Partially deleted in new
chr5	55021348	55034270	chr5:55021348-55034270	0	-	55021348	55021348	8553170	3	174,85,535,	0,1279,12387,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	55021358	55026924	chr5:55021358-55026924	0	-	55021358	55021358	8553170	7	164,85,200,148,165,89,94,	0,1269,1779,2570,3588,4317,5472,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	55021377	55024843	chr5:55021377-55024843	0	-	55021377	55021377	8553170	5	145,85,200,148,145,	0,1250,1760,2551,3321,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	55021377	55027643	chr5:55021377-55027643	0	-	55021377	55021377	8553170	8	145,85,40,148,95,89,166,55,	0,1250,1920,2551,3569,4298,5453,6211,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	55021377	55028268	chr5:55021377-55028268	0	-	55021377	55021377	8553170	7	145,85,40,148,89,166,51,	0,1250,1920,2551,4298,5453,6840,
#Deleted in new
chr5	55021377	55023616	chr5:55021377-55023616	0	-	55021377	55021377	8553170	3	145,85,479,	0,1250,1760,
#Partially deleted in new
chr5	55021377	55028587	chr5:55021377-55028587	0	-	55021377	55021377	8553170	5	145,85,200,166,370,	0,1250,1760,5453,6840,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	55021377	55026874	chr5:55021377-55026874	0	-	55021377	55021377	8553170	7	145,85,200,148,95,89,44,	0,1250,1760,2551,3569,4298,5453,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	55021377	55026909	chr5:55021377-55026909	0	-	55021377	55021377	8553170	6	145,85,148,95,89,79,	0,1250,2551,3569,4298,5453,
#Partially deleted in new
chr5	55024252	55034570	chr5:55024252-55034570	3	+	55024322	55033926	0	5	134,148,151,270,806,	0,407,6181,7111,9512,
#Deleted in new
chr5	55030372	55031454	chr5:55030372-55031454	0	+	55030372	55030372	8553170	2	212,91,	0,991,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	55040846	55040945	chr5:55040846-55040945	3	+	55040846	55040846	8553170	1	99,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	55054427	55055140	chr5:55054427-55055140	3	+	55054427	55054427	8553170	2	354,237,	0,476,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	55063178	55066230	chr5:55063178-55066230	3	+	55063178	55063178	8553170	2	285,282,	0,2770,
#Partially deleted in new
chr5	55073014	55096553	chr5:55073014-55096553	7	+	55073014	55073014	16724991	4	112,112,139,268,	0,10440,19577,23271,
#Partially deleted in new
chr5	55102647	55110252	chr5:55102647-55110252	3	+	55102682	55110182	0	5	105,145,142,270,232,	0,2826,5146,5477,7373,
#Partially deleted in new
chr5	55112994	55173175	chr5:55112994-55173175	3	-	55114217	55173000	789624	12	1324,106,126,226,95,197,117,94,131,229,63,238,	0,6818,7430,11808,14262,15426,20417,27319,30518,33633,59593,59943,
#Partially deleted in new
chr5	55113332	55173146	chr5:55113332-55173146	1	-	55114217	55173000	789624	12	986,118,126,226,95,197,117,94,131,229,63,209,	0,6468,7092,11470,13924,15088,20079,26981,30180,33295,59255,59605,
#Partially deleted in new
chr5	55114147	55173175	chr5:55114147-55173175	1	-	55114217	55173000	789624	11	171,118,226,95,197,117,94,131,229,63,238,	0,5653,10655,13109,14273,19264,26166,29365,32480,58440,58790,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	55119812	55173015	chr5:55119812-55173015	0	-	55124984	55173000	789624	12	106,126,226,86,95,197,117,94,131,229,63,78,	0,612,4990,6541,7444,8608,13599,20501,23700,26815,52775,53125,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	55135756	55173161	chr5:55135756-55173161	0	-	55137574	55173000	789624	6	297,1155,94,131,229,224,	0,725,4557,7756,10871,37181,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	55160117	55164924	chr5:55160117-55164924	3	+	55160192	55164218	0	3	279,262,870,	0,876,3937,
#Partially deleted in new
chr5	55160166	55164131	chr5:55160166-55164131	0	+	55160166	55160166	8553170	4	77,67,204,77,	0,163,885,3888,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	55160167	55167071	chr5:55160167-55167071	0	+	55160167	55160167	789624	4	76,67,262,3017,	0,162,826,3887,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	55160168	55167071	chr5:55160168-55167071	1	+	55160192	55164123	789624	2	228,3017,	0,3886,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	55160169	55164754	chr5:55160169-55164754	1	+	55160192	55164218	789624	3	74,262,700,	0,824,3885,
#Partially deleted in new
chr5	55160173	55164686	chr5:55160173-55164686	0	+	55160173	55160173	8553170	4	70,67,125,87,	0,156,3881,4426,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	55160181	55164433	chr5:55160181-55164433	0	+	55160181	55160181	8553170	3	62,136,379,	0,938,3873,
#Deleted in new
chr5	55160194	55160706	chr5:55160194-55160706	0	+	55160194	55160194	8553170	2	49,377,	0,135,
#Deleted in new
chr5	55170531	55170622	chr5:55170531-55170622	3	-	55170531	55170531	5263520	1	91,	0,
#Deleted in new
chr5	55170645	55170742	chr5:55170645-55170742	3	-	55170645	55170645	5263520	1	97,	0,
#Deleted in new
chr5	55172261	55172353	chr5:55172261-55172353	3	-	55172261	55172261	5263520	1	92,	0,
#Partially deleted in new
chr5	55219613	55227315	chr5:55219613-55227315	0	-	55222245	55227138	789624	7	1193,111,224,77,92,97,297,	0,1402,2562,3333,6962,7221,7405,
#Partially deleted in new
chr5	55219964	55227315	chr5:55219964-55227315	3	-	55220365	55227138	0	7	842,111,224,73,92,97,297,	0,1051,2211,2986,6611,6870,7054,
#Partially deleted in new
chr5	55221106	55227262	chr5:55221106-55227262	0	-	55221106	55221106	8553170	6	20,224,73,92,97,57,	0,1069,1844,5469,5728,6099,
#Deleted in new
chr5	55231151	55233680	chr5:55231151-55233680	3	-	55231374	55233523	789624	3	709,186,538,	0,1209,1991,
#Deleted in new
chr5	55231151	55233597	chr5:55231151-55233597	0	-	55233127	55233523	789624	3	709,186,831,	0,1209,1615,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	55233933	55295201	chr5:55233933-55295201	3	+	55233933	55233933	8553170	5	107,117,125,59,362,	0,45599,49094,49836,60906,
#Partially deleted in new
chr5	55256244	55307722	chr5:55256244-55307722	3	-	55256487	55307573	789624	27	296,97,132,303,94,137,225,76,129,89,85,118,145,141,177,144,609,124,166,159,127,129,146,130,114,74,336,	0,3603,5123,6385,10893,11441,13168,14167,14333,15842,17048,18369,18621,20021,20861,25127,26958,29048,29451,33025,33973,37772,39134,39975,41040,42346,51142,
#Partially deleted in new
chr5	55256245	55307674	chr5:55256245-55307674	1	-	55256481	55307573	789624	28	242,50,97,132,303,94,137,225,76,129,89,85,118,145,141,177,144,609,124,160,165,127,129,146,130,114,74,288,	0,245,3602,5122,6384,10892,11440,13167,14166,14332,15841,17047,18368,18620,20020,20860,25126,26957,29047,29450,33018,33972,37771,39133,39974,41039,42345,51141,
#Partially deleted in new
chr5	55256248	55307694	chr5:55256248-55307694	0	-	55256248	55256248	8553170	27	292,97,132,303,94,137,225,76,129,89,85,118,145,141,177,144,696,124,166,159,127,129,146,130,114,74,308,	0,3599,5119,6381,10889,11437,13164,14163,14329,15838,17044,18365,18617,20017,20857,25123,26867,29044,29447,33021,33969,37768,39130,39971,41036,42342,51138,
#Partially deleted in new
chr5	55270443	55276360	chr5:55270443-55276360	0	-	55270443	55270443	8553170	6	263,89,134,118,145,95,	0,1643,2849,4170,4422,5822,
#Partially deleted in new
chr5	55295443	55307540	chr5:55295443-55307540	0	-	55295443	55307540	789624	4	81,130,114,154,	0,776,1841,11943,
#Partially deleted in new
chr5	55307759	55425581	chr5:55307759-55425581	3	+	55308013	55424772	0	27	388,138,67,63,113,175,91,125,99,103,132,80,111,102,126,151,173,69,129,111,189,164,106,57,163,105,862,	0,14567,16372,19956,20939,32250,33921,35571,36762,37334,39253,41813,43159,45408,50813,58965,70554,71367,80214,89656,92473,97665,102764,106422,108210,115118,116960,
#Partially deleted in new
chr5	55308000	55425106	chr5:55308000-55425106	0	+	55308013	55328771	789624	25	147,63,113,175,91,125,99,103,132,80,111,102,126,151,173,69,129,111,189,164,106,57,163,105,387,	0,19715,20698,32009,33680,35330,36521,37093,39012,41572,42918,45167,50572,58724,70313,71126,79973,89415,92232,97424,102523,106181,107969,114877,116719,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	55308009	55329407	chr5:55308009-55329407	0	+	55308009	55308009	8553170	6	138,138,67,63,113,52,	0,14317,16122,19706,20689,21346,
#Partially deleted in new
chr5	55308068	55347129	chr5:55308068-55347129	0	+	55308068	55308068	8553170	6	79,138,28,35,103,117,	0,14258,16063,36517,37025,38944,
#Partially deleted in new
chr5	55322326	55344620	chr5:55322326-55344620	0	+	55322326	55340069	789624	6	138,67,175,91,125,99,	0,1805,17683,19354,21004,22195,
#Partially deleted in new
chr5	55327529	55343372	chr5:55327529-55343372	0	+	55327529	55327529	8553170	4	249,175,91,42,	0,12480,14151,15801,
#Deleted in new
chr5	55356307	55357523	chr5:55356307-55357523	7	-	55356307	55356307	16724991	1	1216,	0,
#Partially deleted in new
chr5	55405251	55416129	chr5:55405251-55416129	0	+	55405251	55405251	8553170	4	337,106,57,160,	0,5272,8930,10718,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	55416055	55424985	chr5:55416055-55424985	0	+	55416055	55423017	789624	2	77,2108,	0,6822,
#Partially deleted in new
chr5	55424853	55534969	chr5:55424853-55534969	3	-	55425205	55534629	789624	6	481,177,58,281,155,398,	0,1009,16997,43015,66106,109718,
#Partially deleted in new
chr5	55424884	55535050	chr5:55424884-55535050	1	-	55425205	55534629	789624	6	450,177,58,281,152,479,	0,978,16966,42984,50414,109687,
#Partially deleted in new
chr5	55441879	55468290	chr5:55441879-55468290	0	-	55441879	55441879	8553170	2	29,422,	0,25989,
#Partially deleted in new
chr5	55441905	55534951	chr5:55441905-55534951	0	-	55475330	55534629	789624	5	3,281,152,155,380,	0,25963,33393,49054,92666,
#Partially deleted in new
chr5	55441905	55534964	chr5:55441905-55534964	0	-	55441905	55441905	8553170	3	3,281,393,	0,25963,92666,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	55484402	55485086	chr5:55484402-55485086	3	+	55484402	55484402	8553170	1	684,	0,
#Deleted in new
chr5	55508849	55508926	chr5:55508849-55508926	3	-	55508849	55508849	5263520	1	77,	0,
#Deleted in new
chr5	55530155	55530701	chr5:55530155-55530701	7	-	55530155	55530155	16724991	1	546,	0,
#Partially deleted in new
chr5	55530435	55534964	chr5:55530435-55534964	0	-	55530435	55530435	8553170	2	92,393,	0,4136,
#Deleted in new
chr5	55551884	55552554	chr5:55551884-55552554	7	-	55551884	55551884	16724991	1	670,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr5	55625844	55712726	chr5:55625844-55712726	3	-	55626493	55697958	789624	16	815,90,149,114,107,108,195,60,171,94,64,122,133,147,48,510,	0,2046,7909,9699,19944,23362,26684,30870,38848,43383,43712,43913,46718,72001,85607,86372,
#Partially deleted in new
chr5	55625844	55692726	chr5:55625844-55692726	0	-	55633706	55672619	789624	14	815,90,114,114,107,108,195,60,171,94,64,122,133,137,	0,2046,7850,9699,19944,23362,26684,30870,38848,43383,43712,43913,46718,66745,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	55625844	55664863	chr5:55625844-55664863	0	-	55625844	55625844	8553170	8	815,90,1963,107,108,195,60,171,	0,2046,7850,19944,23362,26684,30870,38848,
#Partially deleted in new
chr5	55625846	55697994	chr5:55625846-55697994	1	-	55626493	55697958	789624	14	813,90,149,114,107,108,195,60,171,94,64,122,133,149,	0,2044,7907,9697,19942,23360,26682,30868,38846,43381,43710,43911,46716,71999,
#Partially deleted in new
chr5	55625846	55697994	chr5:55625846-55697994	1	-	55626493	55669616	789624	13	813,90,149,114,107,108,195,60,171,94,64,122,149,	0,2044,7907,9697,19942,23360,26682,30868,38846,43381,43710,43911,71999,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr5	55625857	55712315	chr5:55625857-55712315	0	-	55669860	55697958	789624	15	802,90,149,114,107,108,195,60,171,94,64,122,147,48,99,	0,2033,7896,9686,19931,23349,26671,30857,38835,43370,43699,43900,71988,85594,86359,
#Partially deleted in new
chr5	55625857	55693053	chr5:55625857-55693053	1	-	55626493	55672619	789624	14	802,90,149,114,107,108,195,60,171,94,64,122,133,464,	0,2033,7896,9686,19931,23349,26671,30857,38835,43370,43699,43900,46705,66732,
#Partially deleted in new
chr5	55626410	55692693	chr5:55626410-55692693	1	-	55626493	55691220	789624	14	249,90,149,114,107,195,60,171,94,64,122,133,104,104,	0,1480,7343,9133,19378,26118,30304,38282,42817,43146,43347,46152,64778,66179,
#Partially deleted in new
chr5	55626559	55697992	chr5:55626559-55697992	0	-	55626559	55697958	789624	12	100,90,149,114,107,108,171,94,64,122,133,147,	0,1331,7194,8984,19229,22647,38133,42668,42997,43198,46003,71286,
#Partially deleted in new
chr5	55633395	55645868	chr5:55633395-55645868	0	-	55633395	55633395	8553170	3	507,114,80,	0,2148,12393,
#Partially deleted in new
chr5	55649209	55658038	chr5:55649209-55658038	0	-	55649209	55649209	8553170	4	105,195,60,69,	0,3319,7505,8760,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	55656720	55712261	chr5:55656720-55712261	0	-	55656720	55672619	789624	8	54,171,94,64,122,133,48,45,	0,7972,12507,12836,13037,15842,54731,55496,
#Partially deleted in new
chr5	55656744	55665132	chr5:55656744-55665132	0	-	55656744	55656744	8553170	2	30,440,	0,7948,
#Partially deleted in new
chr5	55664559	55669665	chr5:55664559-55669665	0	-	55664559	55664559	8553170	3	304,94,109,	0,4668,4997,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	55669120	55712261	chr5:55669120-55712261	0	-	55669120	55669120	8553170	7	201,64,122,133,147,48,45,	0,436,637,3442,28725,42331,43096,
#Partially deleted in new
chr5	55669258	55692620	chr5:55669258-55692620	0	-	55669258	55672619	789624	6	63,64,122,260,85,31,	0,298,499,3304,5988,23331,
#Partially deleted in new
chr5	55669595	55712330	chr5:55669595-55712330	0	-	55669595	55697958	789624	5	25,122,133,147,114,	0,162,2967,28250,42621,
#Partially deleted in new
chr5	55669828	55692731	chr5:55669828-55692731	0	-	55669828	55672619	789624	5	51,133,145,85,142,	0,2734,3475,5418,22761,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	55669835	55712302	chr5:55669835-55712302	0	-	55669835	55697958	789624	6	44,133,147,113,48,86,	0,2727,28010,34486,41616,42381,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	55695991	55773194	chr5:55695991-55773194	0	-	55695991	55695991	8553170	5	1221,147,48,510,114,	0,1854,15460,16225,77089,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	55697845	55712291	chr5:55697845-55712291	0	-	55697845	55697958	789624	3	147,148,75,	0,13506,14371,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	55697845	55712333	chr5:55697845-55712333	0	-	55697845	55697958	789624	4	147,156,48,117,	0,4893,13606,14371,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	55697878	55712293	chr5:55697878-55712293	0	-	55697878	55697958	789624	5	114,156,113,48,77,	0,4860,6443,13573,14338,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	55697958	55712329	chr5:55697958-55712329	0	-	55697958	55697958	8553170	6	34,156,98,113,48,113,	0,4780,6084,6363,13493,14258,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	55704274	55712298	chr5:55704274-55712298	0	-	55704274	55704274	8553170	3	160,48,82,	0,7177,7942,
#Partially deleted in new
chr5	55738016	55817146	chr5:55738016-55817146	1	+	55738963	55816540	789624	21	85,83,58,78,78,51,60,81,48,48,48,143,153,155,130,167,146,100,271,111,684,	0,933,8147,22183,25158,25997,29864,43049,43917,47280,47430,47712,48501,49829,52559,54624,60409,75656,76884,77296,78446,
#Partially deleted in new
chr5	55738016	55816777	chr5:55738016-55816777	1	+	55738963	55816540	789624	21	85,83,58,78,78,51,102,81,48,48,48,143,153,155,130,167,146,100,271,111,315,	0,933,8147,22183,25158,25997,41947,43049,43917,47280,47430,47712,48501,49829,52559,54624,60409,75656,76884,77296,78446,
#Partially deleted in new
chr5	55738023	55817157	chr5:55738023-55817157	3	+	55738963	55816540	789624	22	78,83,58,78,78,51,60,102,81,48,48,48,143,153,155,130,167,146,100,271,111,695,	0,926,8140,22176,25151,25990,29857,41940,43042,43910,47273,47423,47705,48494,49822,52552,54617,60402,75649,76877,77289,78439,
#Partially deleted in new
chr5	55738039	55798571	chr5:55738039-55798571	0	+	55738963	55798571	789624	17	62,83,58,78,78,51,102,81,48,48,48,143,153,155,130,167,146,	0,910,8124,22160,25135,25974,41924,43026,43894,47257,47407,47689,48478,49806,52536,54601,60386,
#Partially deleted in new
chr5	55738054	55768085	chr5:55738054-55768085	0	+	55738054	55738054	8553170	7	47,83,58,78,78,51,205,	0,895,8109,22145,25120,25959,29826,
#Partially deleted in new
chr5	55738072	55781074	chr5:55738072-55781074	0	+	55738963	55781074	789624	8	29,83,58,78,51,60,102,9,	0,877,8091,25102,25941,29808,41891,42993,
#Partially deleted in new
chr5	55738104	55764047	chr5:55738104-55764047	0	+	55738963	55764047	789624	6	236,83,58,78,78,34,	0,845,8059,22095,25070,25909,
#Partially deleted in new
chr5	55738114	55780046	chr5:55738114-55780046	0	+	55738963	55780046	789624	8	75,83,58,78,78,51,60,83,	0,835,8049,22085,25060,25899,29766,41849,
#Partially deleted in new
chr5	55738949	55816777	chr5:55738949-55816777	1	+	55738963	55816540	789624	20	83,58,78,78,51,60,81,48,48,48,143,153,155,130,167,146,100,271,111,315,	0,7214,21250,24225,25064,28931,42116,42984,46347,46497,46779,47568,48896,51626,53691,59476,74723,75951,76363,77513,
#Partially deleted in new
chr5	55742079	55780038	chr5:55742079-55780038	0	+	55742159	55780038	789624	7	149,58,78,78,51,60,75,	0,4084,18120,21095,21934,25801,37884,
#Deleted in new
chr5	55750205	55750401	chr5:55750205-55750401	7	-	55750205	55750205	16724991	1	196,	0,
#Partially deleted in new
chr5	55764013	55815423	chr5:55764013-55815423	0	+	55764013	55792668	789624	15	51,60,102,81,48,48,48,143,153,155,167,146,100,271,111,	0,3867,15950,17052,17920,21283,21433,21715,22504,23832,28627,34412,49659,50887,51299,
#Partially deleted in new
chr5	55766910	55816777	chr5:55766910-55816777	1	+	55766929	55816540	789624	15	56,60,81,48,48,143,153,155,130,167,146,100,271,111,315,	0,970,14155,15023,18536,18818,19607,20935,23665,25730,31515,46762,47990,48402,49552,
#Partially deleted in new
chr5	55766930	55785812	chr5:55766930-55785812	0	+	55766930	55767996	789624	7	36,209,81,48,48,48,84,	0,950,14135,15003,18366,18516,18798,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	55777468	55777587	chr5:55777468-55777587	7	+	55777468	55777468	16724991	1	119,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	55780056	55782329	chr5:55780056-55782329	0	+	55780056	55780056	8553170	3	9,81,396,	0,1009,1877,
#Partially deleted in new
chr5	55838800	55840025	chr5:55838800-55840025	7	-	55838800	55838800	16724991	1	1225,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	55851378	55909144	chr5:55851378-55909144	1	+	55851570	55908659	789624	11	255,91,118,182,152,166,80,217,183,102,880,	0,8130,17412,20891,31665,38591,44971,48537,54727,55980,56886,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr5	55851505	55922850	chr5:55851505-55922850	1	+	55851570	55922432	789624	16	128,91,118,182,152,166,80,217,183,102,147,141,94,82,191,455,	0,8003,17285,20764,31538,38464,44844,48410,54600,55853,56759,59026,61971,63341,65138,70890,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr5	55851505	55917337	chr5:55851505-55917337	3	+	55851570	55917120	789624	15	128,91,118,182,152,166,80,217,183,102,147,141,94,82,694,	0,8003,17285,20764,31538,38464,44844,48410,54600,55853,56759,59026,61971,63341,65138,
#Partially deleted in new
chr5	55853313	55922853	chr5:55853313-55922853	1	+	55853561	55922432	789624	16	254,91,118,182,152,166,80,217,183,102,147,141,94,82,191,458,	0,6195,15477,18956,29730,36656,43036,46602,52792,54045,54951,57218,60163,61533,63330,69082,
#Partially deleted in new
chr5	55853321	55917337	chr5:55853321-55917337	1	+	55853561	55917120	789624	15	246,91,118,182,152,166,80,217,183,102,147,141,94,82,694,	0,6187,15469,18948,29722,36648,43028,46594,52784,54037,54943,57210,60155,61525,63322,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr5	55853529	55917120	chr5:55853529-55917120	1	+	55872423	55917120	789624	16	38,91,144,118,182,152,166,80,217,183,102,147,141,94,82,477,	0,5979,13081,15261,18740,29514,36440,42820,46386,52576,53829,54735,57002,59947,61317,63114,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	55859508	55902460	chr5:55859508-55902460	1	+	55859541	55902297	789624	8	91,118,182,152,166,80,217,165,	0,9282,12761,23535,30461,36841,40407,42787,
#Partially deleted in new
chr5	55935094	55994993	chr5:55935094-55994993	3	-	55941081	55976278	0	17	6725,82,97,141,147,102,183,211,83,160,155,167,121,306,79,88,210,	0,7575,12398,16369,16834,17155,19715,20930,22114,25307,28257,29051,33181,34455,41120,47629,59689,
#Partially deleted in new
chr5	55935098	55976314	chr5:55935098-55976314	1	-	55941081	55976278	0	15	6721,82,97,141,147,102,183,211,83,160,155,167,121,306,100,	0,7571,12394,16365,16830,17151,19711,20926,22110,25303,28253,29047,33177,34451,41116,
#Partially deleted in new
chr5	55935124	55976314	chr5:55935124-55976314	1	-	55956218	55976278	0	14	6695,82,97,141,147,102,183,211,160,155,167,121,306,100,	0,7545,12368,16339,16804,17125,19685,20900,25277,28227,29021,33151,34425,41090,
#Deleted in new
chr5	55936142	55941727	chr5:55936142-55941727	3	+	55936142	55936142	8553170	3	194,73,530,	0,4904,5055,
#Partially deleted in new
chr5	55940965	55994792	chr5:55940965-55994792	0	-	55959642	55976278	789624	18	854,82,97,141,147,102,183,211,83,46,160,155,167,121,306,79,88,9,	0,1704,6527,10498,10963,11284,13844,15059,16243,18660,19436,22386,23180,27310,28584,35249,41758,53818,
#Partially deleted in new
chr5	55941027	55994964	chr5:55941027-55994964	1	-	55941081	55976278	0	16	792,82,97,141,147,102,183,211,83,160,155,167,121,306,79,181,	0,1642,6465,10436,10901,11222,13782,14997,16181,19374,22324,23118,27248,28522,35187,53756,
#Partially deleted in new
chr5	55941081	55976278	chr5:55941081-55976278	1	-	55941081	55976278	0	14	738,82,97,141,147,102,211,83,160,155,167,121,306,64,	0,1588,6411,10382,10847,11168,14943,16127,19320,22270,23064,27194,28468,35133,
#Partially deleted in new
chr5	55941522	55947594	chr5:55941522-55947594	0	-	55941522	55941522	8553170	3	297,82,102,	0,1147,5970,
#Partially deleted in new
chr5	55941693	55951637	chr5:55941693-55951637	0	-	55941693	55941693	8553170	4	126,82,97,174,	0,976,5799,9770,
#Partially deleted in new
chr5	55941764	55976278	chr5:55941764-55976278	1	-	55941764	55976278	789624	3	55,82,64,	0,905,34450,
#Partially deleted in new
chr5	55941764	55976278	chr5:55941764-55976278	1	-	55941764	55976278	789624	6	55,82,160,155,96,64,	0,905,18637,21587,27995,34450,
#Partially deleted in new
chr5	55944655	55944733	chr5:55944655-55944733	7	+	55944655	55944655	16724991	1	78,	0,
#Partially deleted in new
chr5	55947560	55982800	chr5:55947560-55982800	1	-	55956218	55976278	0	13	29,141,147,102,183,211,160,155,167,121,306,79,77,	0,3903,4368,4689,7249,8464,12841,15791,16585,20715,21989,28654,35163,
#Partially deleted in new
chr5	55947564	55951506	chr5:55947564-55951506	0	-	55947564	55947564	8553170	3	25,85,43,	0,1333,3899,
#Partially deleted in new
chr5	55955979	55960480	chr5:55955979-55960480	0	-	55955979	55955979	8553170	3	256,83,79,	0,1229,4422,
#Partially deleted in new
chr5	55964208	55976278	chr5:55964208-55976278	1	-	55964208	55976278	789624	2	104,64,	0,12006,
#Partially deleted in new
chr5	55964208	55994794	chr5:55964208-55994794	0	-	55964208	55964208	8553170	4	104,79,88,11,	0,12006,18515,30575,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	55978247	56111329	chr5:55978247-56111329	3	+	55978247	55978247	8553170	4	191,88,66,303,	0,15866,132305,132779,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	55995166	56003649	chr5:55995166-56003649	3	+	55995166	55995166	789624	2	388,1901,	0,6582,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	56000517	56000621	chr5:56000517-56000621	3	-	56000517	56000517	8553170	1	104,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	56059019	56111211	chr5:56059019-56111211	1	+	56059019	56059019	8553170	4	77,107,66,185,	0,49212,51533,52007,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	56059049	56067372	chr5:56059049-56067372	1	+	56059049	56059049	8553170	2	47,337,	0,7986,
#Partially deleted in new
chr5	56099677	56233359	chr5:56099677-56233359	3	-	56100182	56232913	789624	12	627,93,665,168,185,129,61,110,131,123,91,119,	0,2816,11440,16937,27244,44123,60155,71016,76474,83834,133178,133563,
#Partially deleted in new
chr5	56099772	56232926	chr5:56099772-56232926	1	-	56100182	56232913	789624	10	532,93,665,168,185,61,110,131,123,71,	0,2721,11345,16842,27149,60060,70921,76379,83739,133083,
#Partially deleted in new
chr5	56099881	56116951	chr5:56099881-56116951	1	-	56100182	56116715	789624	4	423,93,665,337,	0,2612,11236,16733,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	56125670	56125770	chr5:56125670-56125770	3	+	56125670	56125670	8553170	1	100,	0,
#Partially deleted in new
chr5	56136978	56137531	chr5:56136978-56137531	7	+	56136978	56136978	16724991	1	553,	0,
#Partially deleted in new
chr5	56143782	56233294	chr5:56143782-56233294	1	-	56143788	56183605	789624	6	147,61,110,131,123,54,	0,16050,26911,32369,39729,89458,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	56146738	56146846	chr5:56146738-56146846	7	-	56146738	56146738	16724991	1	108,	0,
#Partially deleted in new
chr5	56176234	56233327	chr5:56176234-56233327	0	-	56176234	56176234	8553170	4	48,123,91,87,	0,7277,56621,57006,
#Deleted in new
chr5	56192529	56193633	chr5:56192529-56193633	7	+	56192529	56192529	16724991	1	1104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	56260332	56260446	chr5:56260332-56260446	7	-	56260332	56260332	16724991	1	114,	0,
#Deleted in new
chr5	56275303	56276630	chr5:56275303-56276630	7	-	56275303	56275303	16724991	1	1327,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	56297563	56297689	chr5:56297563-56297689	3	-	56297563	56297563	8553170	1	126,	0,
#Partially deleted in new
chr5	56313904	56321397	chr5:56313904-56321397	3	-	56313904	56313904	8553170	2	944,283,	0,7210,
#Partially deleted in new
chr5	56381780	56382075	chr5:56381780-56382075	7	+	56381780	56381780	16724991	1	295,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	56457794	56481769	chr5:56457794-56481769	3	-	56457794	56457794	789624	5	149,108,81,101,217,	0,6214,7192,9917,23758,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	56465009	56481946	chr5:56465009-56481946	0	-	56465009	56465009	8553170	3	58,101,419,	0,2702,16518,
#Deleted in new
chr5	56504634	56505072	chr5:56504634-56505072	7	-	56504634	56504634	16724991	1	438,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	56511566	56606232	chr5:56511566-56606232	0	-	56511566	56511566	8553170	6	170,164,74,99,47,211,	0,2195,21515,23563,44574,94455,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	56511721	56556172	chr5:56511721-56556172	3	-	56511721	56556172	789624	5	15,164,74,99,32,	0,2040,21360,23408,44419,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	56511721	56535230	chr5:56511721-56535230	1	-	56511721	56535230	789624	4	15,164,74,101,	0,2040,21360,23408,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	56536582	56537826	chr5:56536582-56537826	3	-	56536582	56536582	8553170	2	358,178,	0,1066,
#Deleted in new
chr5	56770798	56772303	chr5:56770798-56772303	3	+	56770798	56770798	8553170	2	340,445,	0,1060,
#Partially deleted in new
chr5	56815573	56896152	chr5:56815573-56896152	3	+	56815573	56893680	789624	20	482,151,201,201,117,149,122,82,181,279,122,92,190,1297,153,163,132,143,132,2622,	0,41026,44141,49160,49766,50255,56336,57067,57251,59458,63406,65137,65509,65996,67953,69090,70358,71804,72652,77957,
#Partially deleted in new
chr5	56842015	56862164	chr5:56842015-56862164	3	-	56842015	56842015	8553170	4	198,85,245,91,	0,9974,17653,20058,
#Partially deleted in new
chr5	56885952	56896152	chr5:56885952-56896152	0	+	56885952	56885952	8553170	3	111,980,2622,	0,1425,7578,
#Partially deleted in new
chr5	56900040	56910714	chr5:56900040-56910714	3	-	56900040	56900040	8553170	2	375,539,	0,10135,
#Partially deleted in new
chr5	56909259	56917235	chr5:56909259-56917235	3	+	56909645	56916902	789624	6	484,368,124,116,106,421,	0,1909,3751,4614,5601,7555,
#Partially deleted in new
chr5	56909259	56916944	chr5:56909259-56916944	0	+	56909259	56909259	8553170	6	201,228,124,116,106,130,	0,2049,3751,4614,5601,7555,
#Deleted in new
chr5	56909592	56911588	chr5:56909592-56911588	0	+	56909592	56909592	8553170	2	151,420,	0,1576,
#Partially deleted in new
chr5	56909614	56917348	chr5:56909614-56917348	0	+	56909645	56913032	789624	5	129,124,116,106,534,	0,3396,4259,5246,7200,
#Partially deleted in new
chr5	56909623	56913116	chr5:56909623-56913116	0	+	56909623	56909623	8553170	3	120,334,106,	0,1545,3387,
#Partially deleted in new
chr5	56910059	56916919	chr5:56910059-56916919	0	+	56910059	56910059	789624	5	335,124,116,106,105,	0,2951,3814,4801,6755,
#Partially deleted in new
chr5	56910086	56913977	chr5:56910086-56913977	0	+	56910086	56910086	8553170	4	308,70,124,104,	0,955,2924,3787,
#Deleted in new
chr5	56910104	56911295	chr5:56910104-56911295	0	+	56910374	56911295	789624	2	290,127,	0,1064,
#Partially deleted in new
chr5	56910776	56913982	chr5:56910776-56913982	0	+	56910776	56910776	8553170	4	146,70,124,109,	0,265,2234,3097,
#Deleted in new
chr5	56910911	56911295	chr5:56910911-56911295	0	+	56910911	56910911	8553170	1	384,	0,
#Partially deleted in new
chr5	56919601	56952118	chr5:56919601-56952118	1	-	56923127	56952102	789624	13	3984,143,128,95,82,152,73,86,121,135,161,25,25,	0,4089,4313,9165,11062,13645,15826,16064,17976,19281,27324,31026,32492,
#Partially deleted in new
chr5	56919602	56952125	chr5:56919602-56952125	3	-	56923127	56952102	789624	13	3983,143,128,92,82,152,73,86,121,135,146,25,32,	0,4088,4312,9164,11061,13644,15825,16063,17975,19280,27323,31025,32491,
#Partially deleted in new
chr5	56919603	56952113	chr5:56919603-56952113	1	-	56923127	56952102	789624	13	3982,143,128,95,82,152,73,86,121,135,146,25,20,	0,4087,4311,9163,11060,13643,15824,16062,17974,19279,27322,31024,32490,
#Partially deleted in new
chr5	56919603	56952122	chr5:56919603-56952122	0	-	56937696	56952102	789624	14	3982,143,128,95,82,152,73,86,121,43,135,146,25,29,	0,4087,4311,9163,11060,13643,15824,16062,17974,18692,19279,27322,31024,32490,
#Partially deleted in new
chr5	56922583	56941133	chr5:56922583-56941133	1	-	56923127	56939008	789624	11	1002,143,128,95,82,152,73,86,121,135,135,	0,1107,1331,6183,8080,10663,12844,13082,14994,16299,18415,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	56927873	56929573	chr5:56927873-56929573	3	+	56927873	56927873	8553170	1	1700,	0,
#Partially deleted in new
chr5	56935670	56952203	chr5:56935670-56952203	0	-	56935670	56947024	789624	6	81,121,135,146,25,93,	0,1907,3212,11255,14957,16440,
#Partially deleted in new
chr5	56935743	56938971	chr5:56935743-56938971	0	-	56937696	56938971	789624	5	8,43,121,43,89,	0,1150,1834,2552,3139,
#Partially deleted in new
chr5	56938813	56952112	chr5:56938813-56952112	0	-	56938813	56938813	8553170	4	204,146,25,19,	0,8112,11814,13280,
#Partially deleted in new
chr5	56941306	56947152	chr5:56941306-56947152	3	+	56941306	56941306	8553170	2	273,161,	0,5685,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	56947030	56971675	chr5:56947030-56971675	0	-	56947030	56959416	789624	3	41,135,43,	0,12355,24602,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	56947030	56971675	chr5:56947030-56971675	0	-	56947030	56947030	8553170	4	41,25,135,43,	0,3597,12355,24602,
#Partially deleted in new
chr5	56947031	56971675	chr5:56947031-56971675	0	-	56947031	56947031	8553170	3	40,25,43,	0,3596,24601,
#Partially deleted in new
chr5	56975592	56976224	chr5:56975592-56976224	7	-	56975592	56975592	16724991	1	632,	0,
#Deleted in new
chr5	57081744	57081951	chr5:57081744-57081951	7	-	57081744	57081744	16724991	1	207,	0,
#Partially deleted in new
chr5	57120795	57122624	chr5:57120795-57122624	7	+	57120795	57120795	16724991	3	562,178,118,	0,1215,1711,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	57169107	57169209	chr5:57169107-57169209	3	-	57169107	57169107	8553170	1	102,	0,
#Partially deleted in new
chr5	57173947	57264679	chr5:57173947-57264679	1	+	57214130	57262752	789624	13	264,953,120,124,224,67,60,185,141,168,188,103,2086,	0,1500,40126,56898,57150,62018,63165,72352,73127,75461,77006,87232,88646,
#Partially deleted in new
chr5	57174048	57263587	chr5:57174048-57263587	1	+	57246334	57262752	789624	11	163,953,124,224,67,185,141,168,188,103,994,	0,1399,56797,57049,61917,72251,73026,75360,76905,87131,88545,
#Partially deleted in new
chr5	57174116	57263082	chr5:57174116-57263082	3	+	57214130	57262752	789624	12	95,953,120,124,224,67,185,141,168,188,103,489,	0,1331,39957,56729,56981,61849,72183,72958,75292,76837,87063,88477,
#Partially deleted in new
chr5	57175945	57263085	chr5:57175945-57263085	1	+	57214130	57262752	789624	12	455,120,21,124,224,67,185,141,123,188,103,492,	0,38128,45430,54900,55152,60020,70354,71129,73508,75008,85234,86648,
#Partially deleted in new
chr5	57214120	57263085	chr5:57214120-57263085	1	+	57214130	57262752	789624	11	73,21,124,224,67,185,141,168,188,103,492,	0,7255,16725,16977,21845,32179,32954,35288,36833,47059,48473,
#Partially deleted in new
chr5	57231302	57237489	chr5:57231302-57237489	0	+	57231302	57231302	8553170	3	19,67,377,	0,4663,5810,
#Partially deleted in new
chr5	57237040	57249479	chr5:57237040-57249479	0	+	57237040	57237040	8553170	4	132,185,141,71,	0,9259,10034,12368,
#Partially deleted in new
chr5	57245467	57251012	chr5:57245467-57251012	0	+	57245467	57245467	8553170	4	1017,141,168,59,	0,1607,3941,5486,
#Partially deleted in new
chr5	57248861	57261238	chr5:57248861-57261238	0	+	57248861	57248861	8553170	3	715,188,59,	0,2092,12318,
#Partially deleted in new
chr5	57317988	57320020	chr5:57317988-57320020	7	-	57317988	57317988	16724991	1	2032,	0,
#Partially deleted in new
chr5	57395059	57533424	chr5:57395059-57533424	3	+	57395059	57395059	8553170	4	119,151,138,489,	0,99015,101720,137876,
#Deleted in new
chr5	57422463	57424391	chr5:57422463-57424391	7	+	57422463	57422463	16724991	2	121,1739,	0,189,
#Deleted in new
chr5	57480015	57482809	chr5:57480015-57482809	3	-	57481576	57482707	789624	1	2794,	0,
#Partially deleted in new
chr5	57574026	57614341	chr5:57574026-57614341	3	+	57574026	57574026	8553170	4	74,91,79,165,	0,3807,4809,40150,
#Deleted in new
chr5	57614388	57617431	chr5:57614388-57617431	3	+	57614388	57614388	8553170	2	113,707,	0,2336,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	57751191	57751717	chr5:57751191-57751717	3	-	57751191	57751191	8553170	1	526,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	57890326	57899162	chr5:57890326-57899162	3	-	57890326	57890326	789624	3	100,86,3883,	0,4583,4953,
#Partially deleted in new
chr5	58108081	58122341	chr5:58108081-58122341	3	-	58108081	58108081	789624	5	334,139,190,39,23,	0,7757,8380,10389,14237,
#Deleted in new
chr5	58161196	58161752	chr5:58161196-58161752	7	+	58161196	58161196	16724991	1	556,	0,
#Deleted in new
chr5	58453981	58460260	chr5:58453981-58460260	3	-	58454582	58459959	0	14	793,111,130,241,130,98,148,199,96,88,130,117,108,571,	0,929,1303,1557,2044,2510,2963,3199,3506,4102,4417,4743,5003,5708,
#Deleted in new
chr5	58453984	58457569	chr5:58453984-58457569	0	-	58453984	58453984	8553170	5	241,98,148,199,82,	0,2507,2960,3196,3503,
#Deleted in new
chr5	58453986	58460139	chr5:58453986-58460139	1	-	58454582	58459959	789624	15	788,111,130,241,130,98,148,199,96,88,130,117,108,66,342,	0,924,1298,1552,2039,2505,2958,3194,3501,4097,4412,4738,4998,5703,5811,
#Deleted in new
chr5	58454705	58455116	chr5:58454705-58455116	0	-	58454705	58454705	8553170	2	69,206,	0,205,
#Deleted in new
chr5	58454974	58456194	chr5:58454974-58456194	0	-	58454974	58454974	8553170	4	47,130,241,169,	0,310,564,1051,
#Deleted in new
chr5	58455610	58456413	chr5:58455610-58456413	0	-	58455610	58455610	8553170	2	169,388,	0,415,
#Deleted in new
chr5	58456146	58457279	chr5:58456146-58457279	0	-	58456146	58456146	8553170	3	443,148,99,	0,798,1034,
#Deleted in new
chr5	58456742	58457421	chr5:58456742-58457421	0	-	58456742	58456742	8553170	2	350,241,	0,438,
#Deleted in new
chr5	58457005	58457737	chr5:58457005-58457737	0	-	58457005	58457005	8553170	3	87,199,250,	0,175,482,
#Deleted in new
chr5	58457060	58459505	chr5:58457060-58459505	0	-	58457060	58457060	8553170	6	32,199,96,445,117,521,	0,120,427,1023,1664,1924,
#Deleted in new
chr5	58457308	58458895	chr5:58457308-58458895	0	-	58457308	58457308	8553170	5	71,96,88,130,171,	0,179,775,1090,1416,
#Deleted in new
chr5	58457493	58458573	chr5:58457493-58458573	0	-	58457493	58457493	8553170	2	90,490,	0,590,
#Deleted in new
chr5	58457515	58459139	chr5:58457515-58459139	0	-	58457515	58457515	8553170	5	68,88,130,117,155,	0,568,883,1209,1469,
#Deleted in new
chr5	58458296	58459859	chr5:58458296-58459859	0	-	58458296	58458296	8553170	3	545,108,170,	0,688,1393,
#Deleted in new
chr5	58458864	58460086	chr5:58458864-58460086	0	-	58458864	58458864	8553170	2	228,397,	0,825,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	58491434	58497090	chr5:58491434-58497090	3	+	58494536	58495010	789624	3	107,65,2844,	0,2184,2812,
#Deleted in new
chr5	58491434	58494742	chr5:58491434-58494742	0	+	58494536	58494742	789624	3	107,128,496,	0,2276,2812,
#Deleted in new
chr5	58491436	58494743	chr5:58491436-58494743	0	+	58494536	58494743	789624	3	105,65,599,	0,2182,2708,
#Deleted in new
chr5	58491480	58494515	chr5:58491480-58494515	0	+	58491480	58491480	8553170	3	61,128,368,	0,2230,2667,
#Deleted in new
chr5	58491491	58494516	chr5:58491491-58494516	0	+	58491491	58491491	8553170	3	50,220,270,	0,2127,2755,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	58493734	58497090	chr5:58493734-58497090	0	+	58493734	58493734	8553170	2	104,368,	0,2988,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	58494239	58496358	chr5:58494239-58496358	1	+	58494536	58495010	789624	1	2119,	0,
#Deleted in new
chr5	58503294	58503700	chr5:58503294-58503700	7	+	58503294	58503294	16724991	1	406,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	58541566	58558243	chr5:58541566-58558243	3	-	58541566	58541566	789624	4	821,68,237,58,	0,4525,5568,16619,
#Partially deleted in new
chr5	58582220	58617871	chr5:58582220-58617871	0	+	58582220	58582220	8553170	2	194,229,	0,35422,
#Partially deleted in new
chr5	58583039	58859394	chr5:58583039-58859394	3	+	58583208	58851351	789624	5	193,228,119,125,8231,	0,34603,142962,241998,268124,
#Partially deleted in new
chr5	58644363	58794531	chr5:58644363-58794531	0	+	58644363	58644363	8553170	5	75,83,71,119,242,	0,3265,44896,81638,149926,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	58741580	58784779	chr5:58741580-58784779	0	-	58741580	58741580	8553170	2	420,56,	0,43143,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	58741580	58817099	chr5:58741580-58817099	3	-	58741580	58741580	8553170	4	420,86,79,56,	0,73079,74153,75463,
#Partially deleted in new
chr5	58788278	58851527	chr5:58788278-58851527	0	+	58788278	58788278	8553170	3	94,125,364,	0,36759,62885,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	58822502	58823714	chr5:58822502-58823714	7	+	58822502	58822502	16724991	2	752,145,	0,1067,
#Partially deleted in new
chr5	58846884	58863414	chr5:58846884-58863414	3	-	58846884	58846884	8553170	3	191,157,103,	0,1533,16427,
#Partially deleted in new
chr5	58969037	59893798	chr5:58969037-59893798	1	-	58974663	59893622	0	15	6043,183,123,155,100,165,99,173,94,113,50,74,37,192,631,	0,6619,7312,8153,19455,20717,21766,22794,24334,69821,211557,216151,224462,246739,924130,
#Partially deleted in new
chr5	58969044	59217316	chr5:58969044-59217316	1	-	58974663	59217282	789624	16	6036,183,123,155,100,165,99,173,94,113,50,74,37,192,17,79,	0,6612,7305,8146,19448,20710,21759,22787,24327,69814,211550,216144,224455,246732,248175,248193,
#Partially deleted in new
chr5	58970286	59430600	chr5:58970286-59430600	1	-	58974663	59430418	789624	15	4794,183,123,155,100,165,99,173,94,113,50,74,37,192,307,	0,5370,6063,6904,18206,19468,20517,21545,23085,68572,210308,214902,223213,245490,460007,
#Partially deleted in new
chr5	58973687	59586499	chr5:58973687-59586499	1	-	58974663	59586375	0	15	1393,183,123,155,100,165,99,173,94,113,50,74,37,192,171,	0,1969,2662,3503,14805,16067,17116,18144,19684,65171,206907,211501,219812,242089,612641,
#Partially deleted in new
chr5	58973687	59768645	chr5:58973687-59768645	1	-	58974663	59768509	0	15	1393,183,123,155,100,165,99,173,94,113,50,74,37,192,399,	0,1969,2662,3503,14805,16067,17116,18144,19684,65171,206907,211501,219812,242089,794559,
#Partially deleted in new
chr5	58973771	59039512	chr5:58973771-59039512	1	-	58974663	59038873	0	11	1309,183,123,155,100,165,99,173,94,113,455,	0,1885,2578,3419,14721,15983,17032,18060,19600,65087,65286,
#Partially deleted in new
chr5	58974017	58999932	chr5:58974017-58999932	1	-	58974663	58999536	0	10	1063,183,123,155,100,165,99,173,94,444,	0,1639,2332,3173,14475,15737,16786,17814,19354,25471,
#Partially deleted in new
chr5	58974560	59276119	chr5:58974560-59276119	1	-	58974663	59275402	0	15	520,183,123,155,100,165,99,173,94,113,50,74,37,192,782,	0,1096,1789,2630,13932,15194,16243,17271,18811,64298,206034,210628,218939,241216,300777,
#Partially deleted in new
chr5	58974562	59356975	chr5:58974562-59356975	1	-	58974663	59356846	0	15	518,183,123,155,100,165,99,173,94,113,50,74,37,192,218,	0,1094,1787,2628,13930,15192,16241,17269,18809,64296,206032,210626,218937,241214,382195,
#Partially deleted in new
chr5	58974654	59039515	chr5:58974654-59039515	0	-	58974654	58974654	8553170	10	426,183,123,155,100,165,99,173,94,657,	0,1002,1695,2536,13838,15100,16149,17177,18717,64204,
#Partially deleted in new
chr5	58974656	60488076	chr5:58974656-60488076	3	-	58974663	60185598	0	17	424,183,123,155,100,165,99,173,94,113,50,74,37,192,230,131,135,	0,1000,1693,2534,13836,15098,16147,17175,18715,64202,205938,210532,218843,241120,1013831,1210900,1513285,
#Partially deleted in new
chr5	58974920	59768509	chr5:58974920-59768509	0	-	59091093	59768509	0	16	160,183,123,155,100,165,99,173,94,113,44,50,74,37,192,263,	0,736,1429,2270,13572,14834,15883,16911,18451,63938,116161,205674,210268,218579,240856,793326,
#Partially deleted in new
chr5	58974920	59586393	chr5:58974920-59586393	0	-	58974920	59038873	789624	11	160,183,123,155,100,165,99,173,94,113,65,	0,736,1429,2270,13572,14834,15883,16911,18451,63938,611408,
#Partially deleted in new
chr5	58993424	59893285	chr5:58993424-59893285	0	-	58993424	58993424	8553170	6	41,50,74,37,192,118,	0,187170,191764,200075,222352,899743,
#Partially deleted in new
chr5	59039760	59063503	chr5:59039760-59063503	3	+	59039760	59039760	8553170	2	310,419,	0,23324,
#Partially deleted in new
chr5	59157065	59768636	chr5:59157065-59768636	1	-	59157318	59768509	0	6	297,50,74,37,192,390,	0,23529,28123,36434,58711,611181,
#Partially deleted in new
chr5	59164946	59215968	chr5:59164946-59215968	0	-	59164946	59164946	8553170	7	104,174,78,50,74,37,192,	0,1314,7855,15648,20242,28553,50830,
#Partially deleted in new
chr5	59174349	59215935	chr5:59174349-59215935	0	-	59174349	59174349	8553170	5	123,50,74,37,159,	0,6245,10839,19150,41427,
#Partially deleted in new
chr5	59180592	59216826	chr5:59180592-59216826	1	-	59180592	59216826	789624	6	52,74,37,192,11,9,	0,4596,12907,35184,36151,36225,
#Partially deleted in new
chr5	59215453	59988632	chr5:59215453-59988632	0	-	59215453	59215453	8553170	3	515,73,145,	0,581606,773034,
#Deleted in new
chr5	59314109	59314800	chr5:59314109-59314800	7	+	59314109	59314109	16724991	1	691,	0,
#Deleted in new
chr5	59528860	59529251	chr5:59528860-59529251	7	+	59528860	59528860	16724991	1	391,	0,
#Partially deleted in new
chr5	59558559	59988704	chr5:59558559-59988704	0	-	59558559	59558559	8553170	3	234,85,217,	0,2270,429928,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	59703605	59703703	chr5:59703605-59703703	3	-	59703605	59703605	5263520	1	98,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	59986397	60262559	chr5:59986397-60262559	0	-	60160805	60185598	789624	5	2320,147,49,131,162,	0,161350,174371,199159,276000,
#Partially deleted in new
chr5	59988158	60488098	chr5:59988158-60488098	0	-	59988158	59988158	8553170	3	559,131,157,	0,197398,499783,
#Partially deleted in new
chr5	59988234	59988704	chr5:59988234-59988704	0	-	59988234	59988234	8553170	2	83,217,	0,253,
#Partially deleted in new
chr5	59988320	60448707	chr5:59988320-60448707	0	-	59988320	59988320	8553170	3	397,131,71,	0,197236,460316,
#Partially deleted in new
chr5	59988360	60522120	chr5:59988360-60522120	0	-	59988360	59988360	8553170	3	357,131,70,	0,197196,533690,
#Partially deleted in new
chr5	59988440	60488065	chr5:59988440-60488065	0	-	59988440	59988440	8553170	4	277,131,49,124,	0,197116,346641,499501,
#Partially deleted in new
chr5	59988516	60488063	chr5:59988516-60488063	0	-	59988516	60185598	789624	4	201,131,123,122,	0,197040,199779,499425,
#Partially deleted in new
chr5	59988535	60372714	chr5:59988535-60372714	0	-	59988535	60185598	789624	3	182,131,181,	0,197021,383998,
#Partially deleted in new
chr5	59988601	60488063	chr5:59988601-60488063	1	-	60127633	60185598	789624	5	116,98,131,123,122,	0,138982,196955,199694,499340,
#Partially deleted in new
chr5	60021248	60030972	chr5:60021248-60030972	1	+	60021248	60021248	8553170	4	82,81,177,125,	0,517,1294,9599,
#Partially deleted in new
chr5	60030885	60033020	chr5:60030885-60033020	3	+	60030885	60030885	8553170	2	95,244,	0,1891,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	60304046	60304151	chr5:60304046-60304151	3	-	60304046	60304046	8553170	1	105,	0,
#Partially deleted in new
chr5	60429902	60430276	chr5:60429902-60430276	7	-	60429902	60429902	16724991	1	374,	0,
#Deleted in new
chr5	60459847	60460739	chr5:60459847-60460739	7	-	60459847	60459847	16724991	1	892,	0,
#Deleted in new
chr5	60487712	60491518	chr5:60487712-60491518	1	+	60487712	60487712	789624	2	711,1858,	0,1948,
#Deleted in new
chr5	60487712	60487929	chr5:60487712-60487929	3	+	60487712	60487712	8553170	1	217,	0,
#Deleted in new
chr5	60488077	60488327	chr5:60488077-60488327	3	+	60488077	60488077	8553170	1	250,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	60488139	60547657	chr5:60488139-60547657	3	+	60488139	60488139	789624	4	284,140,88,1556,	0,41264,45792,57962,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	60488206	60526418	chr5:60488206-60526418	1	+	60488206	60488206	789624	2	217,5399,	0,32813,
#Deleted in new
chr5	60546218	60546349	chr5:60546218-60546349	3	+	60546218	60546218	8553170	1	131,	0,
#Partially deleted in new
chr5	60596911	60700161	chr5:60596911-60700161	3	-	60597752	60700093	789624	11	1003,186,177,167,141,48,131,128,136,266,116,	0,2163,6479,8778,41838,45900,47833,48580,50486,90050,103134,
#Partially deleted in new
chr5	60597628	60700134	chr5:60597628-60700134	1	-	60597752	60700093	789624	10	286,177,167,141,48,131,128,136,266,89,	0,5762,8061,41121,45183,47116,47863,49769,89333,102417,
#Partially deleted in new
chr5	60597667	60700134	chr5:60597667-60700134	0	-	60689029	60700093	789624	11	247,177,167,141,48,131,128,136,266,66,89,	0,5723,8022,41082,45144,47077,47824,49730,89294,91317,102378,
#Partially deleted in new
chr5	60605683	60628691	chr5:60605683-60628691	0	-	60605683	60605683	8553170	2	173,478,	0,22530,
#Deleted in new
chr5	60630513	60630973	chr5:60630513-60630973	7	+	60630513	60630513	16724991	1	460,	0,
#Partially deleted in new
chr5	60645515	60648147	chr5:60645515-60648147	0	-	60645515	60645515	8553170	2	104,750,	0,1882,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	60647397	60700190	chr5:60647397-60700190	0	-	60687775	60700093	789624	4	136,266,114,145,	0,39564,40327,52648,
#Deleted in new
chr5	60743562	60744970	chr5:60743562-60744970	7	-	60743562	60743562	16724991	1	1408,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	60751790	60844389	chr5:60751790-60844389	3	-	60754623	60787397	789624	9	3043,137,106,57,81,191,98,51,230,	0,5718,12436,14783,16032,20112,35543,47389,92369,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	60751791	60844274	chr5:60751791-60844274	1	-	60754623	60787397	789624	8	3042,137,106,57,81,191,98,115,	0,5717,12435,14782,16031,20111,35542,92368,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	60751792	60844215	chr5:60751792-60844215	1	-	60754623	60784118	789624	11	3041,137,106,57,81,191,119,228,98,51,56,	0,5716,12434,14781,16030,20110,32301,34031,35541,47387,92367,
#Partially deleted in new
chr5	60754457	60787465	chr5:60754457-60787465	0	-	60767896	60787397	789624	7	376,137,106,57,81,145,132,	0,3051,9769,12116,13365,17491,32876,
#Partially deleted in new
chr5	60764229	60844269	chr5:60764229-60844269	0	-	60764229	60787397	789624	8	103,57,81,191,98,51,39,110,	0,2344,3593,7673,23104,34950,38397,79930,
#Partially deleted in new
chr5	60764229	60843538	chr5:60764229-60843538	0	-	60764229	60787397	789624	8	103,57,81,191,98,51,39,117,	0,2344,3593,7673,23104,34950,38397,79192,
#Partially deleted in new
chr5	60764260	60844210	chr5:60764260-60844210	0	-	60768678	60787397	789624	7	72,57,81,45,191,98,51,	0,2313,3562,4385,7642,23073,79899,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	60866456	60866935	chr5:60866456-60866935	3	-	60866456	60866456	8553170	1	479,	0,
#Partially deleted in new
chr5	60873830	60945051	chr5:60873830-60945051	0	-	60924507	60945008	789624	13	853,81,198,125,101,67,69,82,124,102,218,96,120,	0,13609,17058,24445,25796,28611,29817,30961,44434,48223,50460,55033,71101,
#Partially deleted in new
chr5	60873831	60945051	chr5:60873831-60945051	3	-	60874614	60945008	0	12	852,81,198,125,101,67,69,82,124,102,96,120,	0,13608,17057,24444,25795,28610,29816,30960,44433,48222,55032,71100,
#Partially deleted in new
chr5	60873832	60945064	chr5:60873832-60945064	0	-	60924355	60945008	789624	13	851,81,198,125,101,67,69,82,124,102,66,96,133,	0,13607,17056,24443,25794,28609,29815,30959,44432,48221,50458,55031,71099,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	60873833	60907523	chr5:60873833-60907523	0	-	60873833	60873833	8553170	10	850,81,198,1607,125,101,67,69,82,244,	0,13606,17055,18203,24442,25793,28608,29814,30958,33446,
#Partially deleted in new
chr5	60873834	60944959	chr5:60873834-60944959	0	-	60915223	60944959	789624	13	849,81,198,125,101,67,69,82,101,124,102,96,28,	0,13605,17054,24441,25792,28607,29813,30957,41351,44430,48219,55029,71097,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	60873878	60945051	chr5:60873878-60945051	0	-	60909876	60945008	789624	13	805,81,198,125,101,67,69,82,310,124,102,96,120,	0,13561,17010,24397,25748,28563,29769,30913,35769,44386,48175,54985,71053,
#Partially deleted in new
chr5	60890910	60944959	chr5:60890910-60944959	0	-	60903579	60944959	789624	11	176,125,101,190,67,150,82,124,102,96,28,	0,7365,8716,9740,11531,12656,13881,27354,31143,37953,54021,
#Deleted in new
chr5	60891934	60893577	chr5:60891934-60893577	7	-	60891934	60891934	16724991	1	1643,	0,
#Partially deleted in new
chr5	60898313	60918559	chr5:60898313-60918559	0	-	60898313	60898313	8553170	7	87,101,67,69,86,124,48,	0,1313,4128,5334,6474,19951,20198,
#Partially deleted in new
chr5	60898323	60918613	chr5:60898323-60918613	0	-	60898323	60898323	8553170	5	77,101,67,124,102,	0,1303,4118,19941,20188,
#Partially deleted in new
chr5	60902481	60945073	chr5:60902481-60945073	0	-	60902481	60922154	789624	8	27,69,82,124,102,96,42,142,	0,1166,2310,15783,19572,26382,29625,42450,
#Partially deleted in new
chr5	60903359	60945051	chr5:60903359-60945051	0	-	60903359	60903359	8553170	6	357,82,124,102,96,120,	0,1432,14905,18694,25504,41572,
#Partially deleted in new
chr5	60917489	60919573	chr5:60917489-60919573	3	+	60917489	60917489	8553170	3	78,133,197,	0,805,1887,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	60917962	60945059	chr5:60917962-60945059	0	-	60917962	60917962	8553170	4	426,102,96,128,	0,4091,10901,26969,
#Partially deleted in new
chr5	60945128	61153037	chr5:60945128-61153037	3	+	60945255	61152955	789624	4	254,90,41,334,	0,127996,153863,207575,
#Partially deleted in new
chr5	60945206	61153026	chr5:60945206-61153026	1	+	60945255	61099001	789624	3	222,41,323,	0,153785,207497,
#Partially deleted in new
chr5	60945334	61153026	chr5:60945334-61153026	0	+	60945334	61152720	789624	3	48,90,323,	0,127790,207369,
#Deleted in new
chr5	61114431	61116753	chr5:61114431-61116753	3	-	61114431	61114431	8553170	1	2322,	0,
#Deleted in new
chr5	61145845	61146376	chr5:61145845-61146376	7	-	61145845	61145845	16724991	1	531,	0,
#Deleted in new
chr5	61157708	61162474	chr5:61157708-61162474	3	-	61159946	61160171	789624	3	2491,140,258,	0,3379,4508,
#Deleted in new
chr5	61159921	61162468	chr5:61159921-61162468	1	-	61159946	61160171	789624	4	278,140,143,23,	0,1166,2295,2524,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	61162069	61232040	chr5:61162069-61232040	3	+	61162069	61162069	789624	4	457,124,87,128,	0,17634,18282,69843,
#Partially deleted in new
chr5	61201308	61252889	chr5:61201308-61252889	3	-	61201308	61201308	8553170	2	396,181,	0,51400,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	61250556	61264929	chr5:61250556-61264929	1	-	61250556	61250556	789624	3	306,181,153,	0,2152,14220,
#Partially deleted in new
chr5	61332272	61546170	chr5:61332272-61546170	3	+	61332272	61544317	789624	14	676,357,149,151,180,177,147,147,261,136,158,164,82,2716,	0,140408,158513,161987,188990,193527,193977,197779,199192,203211,206541,207323,209611,211182,
#Deleted in new
chr5	61347125	61347716	chr5:61347125-61347716	7	+	61347125	61347125	16724991	1	591,	0,
#Deleted in new
chr5	61375111	61375855	chr5:61375111-61375855	7	+	61375111	61375111	16724991	1	744,	0,
#Deleted in new
chr5	61390667	61391871	chr5:61390667-61391871	7	-	61390667	61390667	16724991	1	1204,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	61637707	61751763	chr5:61637707-61751763	3	+	61637707	61637707	8553170	4	139,94,208,94,	0,110894,112629,113962,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	61637780	61730573	chr5:61637780-61730573	0	+	61637780	61637780	789624	2	66,528,	0,92265,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	61637808	61706535	chr5:61637808-61706535	1	+	61637808	61637808	8553170	4	38,74,188,2670,	0,5518,49074,66057,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	61637808	61730378	chr5:61637808-61730378	0	+	61637808	61637808	789624	4	38,74,243,333,	0,5518,66057,92237,
#Partially deleted in new
chr5	61658473	61687899	chr5:61658473-61687899	1	-	61658473	61658473	8553170	5	1706,154,121,69,55,	0,4916,9283,19149,29371,
#Partially deleted in new
chr5	61663058	61687913	chr5:61663058-61687913	0	-	61663058	61663058	8553170	3	485,69,69,	0,14564,24786,
#Partially deleted in new
chr5	61663149	61698432	chr5:61663149-61698432	3	-	61663149	61663149	789624	8	394,121,69,170,135,36,230,521,	0,4607,14473,24695,25712,32833,34260,34762,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	61664144	61664239	chr5:61664144-61664239	3	-	61664144	61664144	8553170	1	95,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	61686075	61706535	chr5:61686075-61706535	0	+	61686075	61686075	789624	3	37,188,2670,	0,807,17790,
#Partially deleted in new
chr5	61686871	61704183	chr5:61686871-61704183	0	+	61686871	61686871	8553170	2	199,318,	0,16994,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	61732773	61735668	chr5:61732773-61735668	3	-	61732773	61732773	789624	2	973,292,	0,2603,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	61735137	61735669	chr5:61735137-61735669	0	-	61735137	61735137	8553170	2	389,45,	0,487,
#Deleted in new
chr5	61831946	61833024	chr5:61831946-61833024	7	-	61831946	61831946	16724991	1	1078,	0,
#Partially deleted in new
chr5	61878108	61886129	chr5:61878108-61886129	3	+	61878108	61878108	8553170	2	291,163,	0,7858,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	62146664	62146946	chr5:62146664-62146946	3	+	62146664	62146664	8553170	1	282,	0,
#Partially deleted in new
chr5	62306161	62385676	chr5:62306161-62385676	3	+	62306472	62385569	0	20	375,95,120,55,123,101,96,55,163,91,64,92,143,205,111,68,151,102,136,193,	0,40968,41886,43904,46426,47113,48997,51529,51975,55080,55304,56288,57016,57533,59081,60252,67525,71499,74956,79322,
#Partially deleted in new
chr5	62306205	62537249	chr5:62306205-62537249	0	+	62306205	62306205	8553170	6	331,114,116,77,80,41,	0,209182,219936,224503,230496,231003,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr5	62306250	62386383	chr5:62306250-62386383	1	+	62308507	62385569	0	21	286,203,95,120,55,123,101,96,55,163,91,64,92,143,205,111,68,151,102,136,900,	0,2058,40879,41797,43815,46337,47024,48908,51440,51886,54991,55215,56199,56927,57444,58992,60163,67436,71410,74867,79233,
#Partially deleted in new
chr5	62306451	62385628	chr5:62306451-62385628	1	+	62306472	62385569	0	21	85,95,120,55,123,101,96,55,163,91,64,92,143,205,111,68,114,151,102,136,145,	0,40678,41596,43614,46136,46823,48707,51239,51685,54790,55014,55998,56726,57243,58791,59962,65986,67235,71209,74666,79032,
#Partially deleted in new
chr5	62306451	62361279	chr5:62306451-62361279	0	+	62306472	62361279	789624	10	85,95,120,55,66,101,96,55,163,38,	0,40678,41596,43614,46136,46823,48707,51239,51685,54790,
#Partially deleted in new
chr5	62306457	62353021	chr5:62306457-62353021	0	+	62306457	62306457	8553170	5	79,95,120,55,434,	0,40672,41590,43608,46130,
#Partially deleted in new
chr5	62306927	62350107	chr5:62306927-62350107	0	+	62347146	62350107	789624	4	292,95,120,42,	0,40202,41120,43138,
#Partially deleted in new
chr5	62311812	62385719	chr5:62311812-62385719	1	+	62347146	62385569	0	20	69,95,120,55,66,101,96,55,163,91,64,92,143,205,111,68,151,102,136,236,	0,35317,36235,38253,40775,41462,43346,45878,46324,49429,49653,50637,51365,51882,53430,54601,61874,65848,69305,73671,
#Partially deleted in new
chr5	62361305	62377731	chr5:62361305-62377731	0	+	62361305	62377731	789624	4	27,143,151,71,	0,1872,12381,16355,
#Partially deleted in new
chr5	62362338	62363267	chr5:62362338-62363267	0	+	62362338	62362338	8553170	2	203,90,	0,839,
#Partially deleted in new
chr5	62387253	62403933	chr5:62387253-62403933	3	-	62389009	62403772	0	12	1799,107,64,65,93,124,50,94,62,87,74,240,	0,3622,4917,5672,6701,7230,11257,11392,11566,14782,16019,16440,
#Partially deleted in new
chr5	62388909	62391367	chr5:62388909-62391367	0	-	62388909	62388909	8553170	2	143,492,	0,1966,
#Partially deleted in new
chr5	62391716	62403898	chr5:62391716-62403898	1	-	62391970	62403772	789624	11	290,64,65,93,124,50,94,62,87,74,205,	0,454,1209,2238,2767,6794,6929,7103,10319,11556,11977,
#Partially deleted in new
chr5	62392177	62403939	chr5:62392177-62403939	0	-	62398491	62403772	789624	10	57,65,93,124,132,94,62,87,74,246,	0,748,1777,2306,6251,6468,6642,9858,11095,11516,
#Partially deleted in new
chr5	62392811	62403891	chr5:62392811-62403891	0	-	62392811	62392811	8553170	9	179,93,124,50,94,62,87,74,198,	0,1143,1672,5699,5834,6008,9224,10461,10882,
#Partially deleted in new
chr5	62403971	62451863	chr5:62403971-62451863	0	+	62437279	62451863	789624	5	132,144,101,73,134,	0,33302,39011,45955,47758,
#Partially deleted in new
chr5	62404049	62580680	chr5:62404049-62580680	0	+	62437279	62579410	789624	29	107,144,101,73,204,133,59,49,71,193,153,44,91,48,106,127,34,41,117,114,116,77,80,81,96,114,122,83,227,	0,33224,38933,45877,47680,63081,66200,70366,72633,79051,79960,81369,83721,85252,86065,89948,100617,100808,102191,111338,122092,126659,132652,133159,146317,147173,157086,175351,176404,
#Partially deleted in new
chr5	62412660	62443035	chr5:62412660-62443035	0	+	62437279	62443035	789624	4	269,64,144,53,	0,9844,24613,30322,
#Partially deleted in new
chr5	62412766	62628577	chr5:62412766-62628577	3	+	62437279	62627318	789624	30	163,144,101,73,204,133,59,49,71,193,153,44,91,48,106,127,34,41,117,114,116,77,80,81,96,114,122,96,85,1424,	0,24507,30216,37160,38963,54364,57483,61649,63916,70334,71243,72652,75004,76535,77348,81231,91900,92091,93474,102621,113375,117942,123935,124442,137600,138456,148369,178810,188997,214387,
#Partially deleted in new
chr5	62413381	62451903	chr5:62413381-62451903	0	+	62437279	62451903	789624	5	62,144,101,73,174,	0,23892,29601,36545,38348,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr5	62418883	62627704	chr5:62418883-62627704	1	+	62419013	62627318	789624	30	244,144,101,73,204,133,59,49,71,193,153,44,91,48,106,127,34,41,117,114,116,77,80,81,96,114,122,96,85,551,	0,18390,24099,31043,32846,48247,51366,55532,57799,64217,65126,66535,68887,70418,71231,75114,85783,85974,87357,96504,107258,111825,117818,118325,131483,132339,142252,172693,182880,208270,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	62443175	62443282	chr5:62443175-62443282	3	+	62443175	62443175	8553170	1	107,	0,
#Partially deleted in new
chr5	62449730	62467207	chr5:62449730-62467207	0	+	62449730	62449730	8553170	3	269,204,77,	0,1999,17400,
#Partially deleted in new
chr5	62467203	62483390	chr5:62467203-62483390	0	+	62467203	62467203	8553170	4	60,59,49,290,	0,3046,7212,15897,
#Partially deleted in new
chr5	62512245	62512482	chr5:62512245-62512482	7	-	62512245	62512245	16724991	1	237,	0,
#Partially deleted in new
chr5	62515450	62526745	chr5:62515450-62526745	0	+	62515450	62515450	8553170	2	51,604,	0,10691,
#Partially deleted in new
chr5	62515457	62628546	chr5:62515457-62628546	0	+	62515457	62627163	789624	6	44,96,114,122,96,1393,	0,34909,35765,45678,76119,111696,
#Partially deleted in new
chr5	62560695	62591650	chr5:62560695-62591650	0	+	62560695	62560695	8553170	3	310,122,74,	0,440,30881,
#Partially deleted in new
chr5	62561135	62581467	chr5:62561135-62581467	0	+	62561135	62578761	789624	3	122,232,1014,	0,17568,19318,
#Deleted in new
chr5	62561858	62562216	chr5:62561858-62562216	7	-	62561858	62561858	16724991	1	358,	0,
#Deleted in new
chr5	62575950	62576271	chr5:62575950-62576271	7	-	62575950	62575950	16724991	1	321,	0,
#Deleted in new
chr5	62578734	62581448	chr5:62578734-62581448	3	+	62579438	62581307	789624	2	201,2048,	0,666,
#Partially deleted in new
chr5	62578820	62628582	chr5:62578820-62628582	1	+	62591637	62627318	789624	4	115,96,85,1429,	0,12756,22943,48333,
#Deleted in new
chr5	62578836	62581442	chr5:62578836-62581442	0	+	62578836	62578836	8553170	3	99,83,989,	0,564,1617,
#Deleted in new
chr5	62578874	62580863	chr5:62578874-62580863	1	+	62579438	62580475	789624	3	61,232,410,	0,526,1579,
#Partially deleted in new
chr5	62601228	62627569	chr5:62601228-62627569	0	+	62601228	62601228	8553170	3	98,85,416,	0,535,25925,
#Deleted in new
chr5	62776876	62777263	chr5:62776876-62777263	7	-	62776876	62776876	16724991	1	387,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	63022918	63023489	chr5:63022918-63023489	7	-	63022918	63022918	16724991	1	571,	0,
#Deleted in new
chr5	63301522	63302056	chr5:63301522-63302056	7	+	63301522	63301522	16724991	2	171,129,	0,405,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	63957892	63981043	chr5:63957892-63981043	3	-	63957892	63957892	8553170	2	123,96,	0,23055,
#Deleted in new
chr5	63960355	63962133	chr5:63960355-63962133	3	-	63960450	63961719	789624	1	1778,	0,
#Deleted in new
chr5	63961594	63962507	chr5:63961594-63962507	0	-	63961594	63961719	789624	2	512,41,	0,872,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	64165843	64217786	chr5:64165843-64217786	1	+	64200807	64217420	789624	5	110,135,96,960,426,	0,34964,46221,47714,51517,
#Partially deleted in new
chr5	64166161	64213647	chr5:64166161-64213647	0	+	64200807	64213647	789624	4	100,135,96,90,	0,34646,45903,47396,
#Partially deleted in new
chr5	64404511	64486615	chr5:64404511-64486615	7	-	64404511	64404511	16724991	5	154,150,574,156,66,	0,1978,8643,46159,82038,
#Partially deleted in new
chr5	64506256	64575904	chr5:64506256-64575904	0	+	64506256	64506256	8553170	2	533,131,	0,69517,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	64506298	64612312	chr5:64506298-64612312	3	+	64506624	64609252	789624	6	491,167,131,148,71,3152,	0,1412,69475,88411,92066,102862,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	64539503	64539792	chr5:64539503-64539792	3	+	64539503	64539503	8553170	1	289,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	64573568	64573670	chr5:64573568-64573670	3	+	64573568	64573568	8553170	1	102,	0,
#Partially deleted in new
chr5	64575681	64609192	chr5:64575681-64609192	0	+	64575681	64575681	789624	5	223,148,71,85,32,	0,19028,22683,25723,33479,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	64674852	64675387	chr5:64674852-64675387	7	+	64674852	64674852	16724991	1	535,	0,
#Partially deleted in new
chr5	64690307	64718070	chr5:64690307-64718070	3	+	64690623	64718022	789624	3	507,158,182,	0,5199,27581,
#Partially deleted in new
chr5	64690441	64718090	chr5:64690441-64718090	0	+	64690623	64694108	789624	4	373,113,158,202,	0,3645,5065,27447,
#Partially deleted in new
chr5	64690531	64717963	chr5:64690531-64717963	0	+	64690623	64694108	789624	4	283,96,158,75,	0,3555,4975,27357,
#Partially deleted in new
chr5	64691240	64717999	chr5:64691240-64717999	0	+	64691240	64691240	8553170	3	368,158,111,	0,4266,26648,
#Partially deleted in new
chr5	64691318	64718082	chr5:64691318-64718082	0	+	64691318	64691318	8553170	3	180,158,194,	0,4188,26570,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	64718143	64768685	chr5:64718143-64768685	3	-	64724383	64768517	789624	5	6430,73,144,48,181,	0,9963,22913,36171,50361,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	64727670	64768619	chr5:64727670-64768619	0	-	64727670	64727670	8553170	4	509,144,48,115,	0,13386,26644,40834,
#Partially deleted in new
chr5	64741056	64768627	chr5:64741056-64768627	0	-	64741056	64741056	8553170	4	144,48,77,123,	0,13258,23988,27448,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	64741135	64768649	chr5:64741135-64768649	0	-	64741135	64741135	8553170	5	65,48,148,77,145,	0,13179,13487,23909,27369,
#Partially deleted in new
chr5	64768929	65018763	chr5:64768929-65018763	3	+	64769146	65018321	0	14	259,97,113,144,99,104,70,80,31,158,104,110,104,605,	0,5761,12991,14906,16551,17594,20021,31318,32372,35299,116513,202773,208205,249229,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	64768945	64808562	chr5:64768945-64808562	1	+	64769146	64807806	789624	11	243,97,113,144,99,104,70,80,31,158,964,	0,5745,12975,14890,16535,17578,20005,31302,32356,35283,38653,
#Partially deleted in new
chr5	64773851	64789020	chr5:64773851-64789020	0	+	64773851	64773851	8553170	7	44,97,113,144,99,104,70,	0,839,8069,9984,11629,12672,15099,
#Deleted in new
chr5	64800244	64804907	chr5:64800244-64804907	0	+	64800244	64800244	8553170	3	83,31,679,	0,1057,3984,
#Partially deleted in new
chr5	64884155	65018591	chr5:64884155-65018591	0	+	64884155	64884155	8553170	5	130,104,110,104,433,	0,1287,87547,92979,134003,
#Deleted in new
chr5	65020037	65020551	chr5:65020037-65020551	3	+	65020037	65020037	8553170	1	514,	0,
#Deleted in new
chr5	65020613	65020989	chr5:65020613-65020989	3	+	65020613	65020613	8553170	1	376,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	65123368	65123474	chr5:65123368-65123474	3	+	65123368	65123368	8553170	1	106,	0,
#Partially deleted in new
chr5	65148735	65481920	chr5:65148735-65481920	3	-	65151835	65473673	789624	25	3210,157,177,205,130,139,164,81,124,134,103,64,146,108,142,147,106,44,146,84,212,169,365,376,578,	0,21881,24096,39280,48286,66058,66588,75584,76188,77350,93368,111864,114081,124604,142593,151249,180642,185306,302739,303397,303971,311434,322042,324841,332607,
#Partially deleted in new
chr5	65148738	65481417	chr5:65148738-65481417	0	-	65452185	65473673	789624	26	3207,157,177,205,130,139,164,81,124,134,103,64,159,104,142,137,147,106,44,146,89,212,169,365,376,75,	0,21878,24093,39277,48283,66055,66585,75581,76185,77347,93365,111861,114065,124601,142590,148369,151246,180639,185303,302736,303394,303968,311431,322039,324838,332604,
#Partially deleted in new
chr5	65151527	65198765	chr5:65151527-65198765	0	-	65151527	65151527	8553170	6	418,157,177,205,130,235,	0,19089,21304,36488,45494,47003,
#Partially deleted in new
chr5	65172939	65214183	chr5:65172939-65214183	0	-	65172939	65172939	8553170	4	69,205,130,146,	0,15076,24082,41098,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	65209920	65210948	chr5:65209920-65210948	7	+	65209920	65209920	16724991	2	260,477,	0,551,
#Partially deleted in new
chr5	65214397	65473694	chr5:65214397-65473694	0	-	65214397	65214397	8553170	18	535,164,81,124,134,103,64,146,108,147,106,44,146,84,212,169,365,118,	0,926,9922,10526,11688,27706,46202,48419,58942,85587,114980,119644,237077,237735,238309,245772,256380,259179,
#Partially deleted in new
chr5	65214644	65473691	chr5:65214644-65473691	0	-	65214644	65214644	8553170	19	288,164,81,124,134,103,64,146,108,142,147,106,44,146,84,212,169,365,115,	0,679,9675,10279,11441,27459,45955,48172,58695,76684,85340,114733,119397,236830,237488,238062,245525,256133,258932,
#Deleted in new
chr5	65251126	65251784	chr5:65251126-65251784	7	-	65251126	65251126	16724991	1	658,	0,
#Partially deleted in new
chr5	65256389	65262937	chr5:65256389-65262937	0	-	65256389	65256389	8553170	3	165,64,121,	0,4210,6427,
#Deleted in new
chr5	65415352	65416222	chr5:65415352-65416222	7	+	65415352	65415352	16724991	1	870,	0,
#Partially deleted in new
chr5	65451315	65473673	chr5:65451315-65473673	0	-	65451315	65451315	8553170	6	305,89,212,169,365,97,	0,817,1391,8854,19462,22261,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	65486443	65487048	chr5:65486443-65487048	3	-	65486443	65486443	8553170	2	209,156,	0,449,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	65517765	65563171	chr5:65517765-65563171	3	-	65518474	65554907	789624	11	868,54,127,99,83,47,73,57,150,102,74,	0,3709,10686,11153,11351,25036,33798,34727,37031,43697,45332,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	65517765	65563168	chr5:65517765-65563168	1	-	65518474	65554907	789624	11	868,54,127,99,83,47,73,57,150,68,71,	0,3709,10686,11153,11351,25036,33798,34727,37031,43731,45332,
#Partially deleted in new
chr5	65517766	65554965	chr5:65517766-65554965	1	-	65518474	65554907	789624	9	867,54,127,99,83,47,73,57,169,	0,3708,10685,11152,11350,25035,33797,34726,37030,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	65517819	65563125	chr5:65517819-65563125	1	-	65518474	65554817	789624	11	814,54,127,99,83,47,73,57,102,102,28,	0,3655,10632,11099,11297,24982,33744,34673,36977,43643,45278,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	65518334	65563145	chr5:65518334-65563145	1	-	65518474	65554817	789624	10	299,54,127,83,47,73,57,150,102,48,	0,3140,10117,10782,24467,33229,34158,36462,43128,44763,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	65518556	65563168	chr5:65518556-65563168	0	-	65518556	65518556	8553170	8	77,54,127,131,83,47,68,71,	0,2918,9895,10362,10560,24245,42940,44541,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	65528463	65561535	chr5:65528463-65561535	0	-	65551162	65554907	789624	9	115,99,83,47,137,73,57,150,73,	0,455,653,14338,22642,23100,24029,26333,32999,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	65528463	65551235	chr5:65528463-65551235	0	-	65551162	65551235	789624	5	115,99,83,47,130,	0,455,653,14338,22642,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	65528525	65563168	chr5:65528525-65563168	0	-	65528525	65561511	789624	9	53,99,83,47,73,57,102,68,71,	0,393,591,14276,23038,23967,26271,32971,34572,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	65528527	65563127	chr5:65528527-65563127	0	-	65528527	65528527	8553170	5	51,83,47,68,30,	0,589,14274,32969,34570,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	65528542	65563127	chr5:65528542-65563127	0	-	65541370	65554907	789624	10	36,99,83,82,47,73,57,150,68,30,	0,376,574,12812,14259,23021,23950,26254,32954,34555,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	65528979	65529786	chr5:65528979-65529786	0	-	65528979	65528979	8553170	2	38,670,	0,137,
#Partially deleted in new
chr5	65528992	65555271	chr5:65528992-65555271	0	-	65528992	65554907	789624	6	25,83,47,73,57,475,	0,124,13809,22571,23500,25804,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	65550466	65561564	chr5:65550466-65561564	1	-	65551162	65554907	789624	5	776,73,57,150,68,	0,1097,2026,4330,11030,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	65560969	65563136	chr5:65560969-65563136	0	-	65560969	65560969	8553170	2	595,39,	0,2128,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	65561115	65563123	chr5:65561115-65563123	0	-	65561115	65561115	8553170	3	449,206,26,	0,1687,1982,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	65563235	65568079	chr5:65563235-65568079	0	+	65563235	65563235	8553170	2	271,567,	0,4277,
#Partially deleted in new
chr5	65563238	65587549	chr5:65563238-65587549	3	+	65563310	65587396	0	11	268,103,101,121,448,191,190,182,82,183,297,	0,4274,6393,6639,8600,13640,16185,19799,21775,22760,24014,
#Partially deleted in new
chr5	65563238	65587541	chr5:65563238-65587541	1	+	65563437	65587396	789624	12	268,37,103,101,121,448,191,190,182,82,183,289,	0,564,4274,6393,6639,8600,13640,16185,19799,21775,22760,24014,
#Partially deleted in new
chr5	65563238	65587541	chr5:65563238-65587541	1	+	65569945	65587396	0	10	268,101,121,448,191,190,182,82,183,289,	0,6393,6639,8600,13640,16185,19799,21775,22760,24014,
#Partially deleted in new
chr5	65563289	65569971	chr5:65563289-65569971	0	+	65563310	65568945	789624	5	217,103,77,101,94,	0,4223,5628,6342,6588,
#Partially deleted in new
chr5	65563292	65571884	chr5:65563292-65571884	0	+	65563310	65569661	789624	5	214,103,96,121,46,	0,4220,6344,6585,8546,
#Partially deleted in new
chr5	65563295	65587422	chr5:65563295-65587422	0	+	65563310	65563813	789624	12	211,37,103,101,121,448,191,190,182,82,183,170,	0,507,4217,6336,6582,8543,13583,16128,19742,21718,22703,23957,
#Partially deleted in new
chr5	65563298	65587527	chr5:65563298-65587527	0	+	65563310	65569690	789624	10	208,101,121,448,191,190,182,82,183,275,	0,6333,6579,8540,13580,16125,19739,21715,22700,23954,
#Partially deleted in new
chr5	65563866	65571927	chr5:65563866-65571927	0	+	65568983	65571927	789624	6	79,103,77,101,121,89,	0,3646,5051,5765,6011,7972,
#Partially deleted in new
chr5	65563887	65572284	chr5:65563887-65572284	0	+	65567559	65572284	789624	5	58,103,101,121,446,	0,3625,5744,5990,7951,
#Partially deleted in new
chr5	65569362	65576926	chr5:65569362-65576926	0	+	65569362	65569362	8553170	4	370,121,448,48,	0,515,2476,7516,
#Partially deleted in new
chr5	65572085	65583112	chr5:65572085-65583112	0	+	65572085	65579491	789624	4	201,191,129,75,	0,4793,7399,10952,
#Partially deleted in new
chr5	65576951	65583291	chr5:65576951-65583291	0	+	65576951	65576951	8553170	3	118,190,254,	0,2472,6086,
#Partially deleted in new
chr5	65579295	65585047	chr5:65579295-65585047	0	+	65579295	65579295	8553170	3	318,182,34,	0,3742,5718,
#Partially deleted in new
chr5	65582555	65587278	chr5:65582555-65587278	0	+	65582555	65582555	8553170	4	664,82,183,26,	0,2458,3443,4697,
#Partially deleted in new
chr5	65589679	65624646	chr5:65589679-65624646	3	-	65591768	65624274	0	11	2269,125,111,130,135,216,183,279,122,163,453,	0,4841,6741,7371,15231,19563,21181,21923,24418,28413,34514,
#Partially deleted in new
chr5	65590175	65624299	chr5:65590175-65624299	1	-	65591483	65624274	0	13	127,55,77,125,111,130,135,216,183,279,122,163,106,	0,1272,1696,4345,6245,6875,14735,19067,20685,21427,23922,27917,34018,
#Partially deleted in new
chr5	65590175	65624296	chr5:65590175-65624296	1	-	65590298	65624274	0	13	127,55,106,125,111,130,135,216,183,279,122,163,103,	0,1272,1667,4345,6245,6875,14735,19067,20685,21427,23922,27917,34018,
#Partially deleted in new
chr5	65606915	65610874	chr5:65606915-65610874	0	-	65606915	65606915	8553170	3	252,216,14,	0,2327,3945,
#Partially deleted in new
chr5	65610861	65624320	chr5:65610861-65624320	0	-	65614195	65624274	789624	4	182,125,122,127,	0,895,3236,13332,
#Partially deleted in new
chr5	65611669	65624360	chr5:65611669-65624360	0	-	65613840	65624274	789624	5	212,129,122,163,167,	0,2057,2428,6423,12524,
#Partially deleted in new
chr5	65618231	65625975	chr5:65618231-65625975	0	-	65618231	65624274	789624	4	24,310,181,59,	0,5962,7076,7685,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	65624715	65666233	chr5:65624715-65666233	1	+	65625060	65664611	789624	13	391,69,100,85,128,73,45,18,134,199,101,148,1730,	0,10585,11228,12980,22339,26094,27785,30920,33652,35983,37334,39521,39788,
#Partially deleted in new
chr5	65624764	65630891	chr5:65624764-65630891	3	+	65629587	65630340	789624	2	342,1424,	0,4703,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	65625003	65666074	chr5:65625003-65666074	0	+	65625003	65625003	8553170	10	103,69,100,85,128,73,45,134,3686,1571,	0,10297,10940,12692,22051,25806,27497,33364,35695,39500,
#Partially deleted in new
chr5	65625033	65664764	chr5:65625033-65664764	3	+	65625060	65664611	789624	13	73,69,100,85,128,73,45,18,134,199,101,151,261,	0,10267,10910,12662,22021,25776,27467,30602,33334,35665,37016,39200,39470,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	65625039	65666069	chr5:65625039-65666069	1	+	65625060	65664611	789624	12	67,69,100,85,128,73,45,134,199,101,148,1566,	0,10261,10904,12656,22015,25770,27461,33328,35659,37010,39197,39464,
#Partially deleted in new
chr5	65625044	65658482	chr5:65625044-65658482	0	+	65625060	65647085	789624	7	62,69,100,128,73,45,115,	0,10256,10899,22010,25765,27456,33323,
#Partially deleted in new
chr5	65625044	65664766	chr5:65625044-65664766	1	+	65625060	65664611	789624	12	62,69,100,85,128,73,45,134,199,101,151,263,	0,10256,10899,12651,22010,25765,27456,33323,35654,37005,39189,39459,
#Partially deleted in new
chr5	65625068	65652736	chr5:65625068-65652736	0	+	65625068	65625068	8553170	7	38,69,100,85,128,73,236,	0,10232,10875,12627,21986,25741,27432,
#Partially deleted in new
chr5	65626008	65629601	chr5:65626008-65629601	0	+	65629587	65629601	8553170	2	198,134,	0,3459,
#Partially deleted in new
chr5	65635339	65660813	chr5:65635339-65660813	0	+	65635339	65647085	789624	8	30,100,128,73,45,18,134,115,	0,604,11715,15470,17161,20296,23028,25359,
#Partially deleted in new
chr5	65655633	65661087	chr5:65655633-65661087	0	+	65655633	65655633	8553170	3	20,134,389,	0,2734,5065,
#Partially deleted in new
chr5	65657970	65664381	chr5:65657970-65664381	0	+	65657970	65657970	8553170	4	531,199,101,145,	0,2728,4079,6266,
#Deleted in new
chr5	65661715	65664764	chr5:65661715-65664764	0	+	65661715	65661715	8553170	3	435,148,261,	0,2521,2788,
#Deleted in new
chr5	65664118	65664766	chr5:65664118-65664766	0	+	65664118	65664118	8553170	2	266,263,	0,385,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	65665927	65722130	chr5:65665927-65722130	3	-	65670245	65720807	789624	11	4430,84,38,63,139,105,100,70,104,122,214,	0,5987,6316,14566,14728,19440,38351,42561,47033,54780,55989,
#Partially deleted in new
chr5	65680687	65723035	chr5:65680687-65723035	0	-	65680687	65720807	789624	7	107,105,100,70,104,122,279,	0,4680,23591,27801,32273,40020,42069,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	65722195	65829283	chr5:65722195-65829283	3	+	65722373	65822915	0	13	219,260,149,108,103,161,136,367,202,187,129,137,6503,	0,36371,40764,55231,57983,59065,63579,65922,70258,87319,87841,90059,100585,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	65722242	65829283	chr5:65722242-65829283	1	+	65762970	65822915	789624	12	172,149,108,103,161,136,367,202,187,129,137,6503,	0,40717,55184,57936,59018,63532,65875,70211,87272,87794,90012,100538,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	65722246	65762989	chr5:65722246-65762989	0	+	65722373	65741000	789624	4	168,106,260,30,	0,18648,36320,40713,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	65722257	65793649	chr5:65722257-65793649	0	+	65722257	65722257	8553170	9	157,260,149,108,103,161,136,367,1196,	0,36309,40702,55169,57921,59003,63517,65860,70196,
#Deleted in new
chr5	65732972	65733654	chr5:65732972-65733654	7	+	65732972	65732972	16724991	1	682,	0,
#Partially deleted in new
chr5	65777416	65823325	chr5:65777416-65823325	0	+	65777416	65777416	8553170	10	118,103,161,136,367,202,187,129,137,545,	0,2762,3844,8358,10701,15037,32098,32620,34838,45364,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	65780027	65786060	chr5:65780027-65786060	0	+	65780027	65780027	8553170	3	254,161,286,	0,1233,5747,
#Partially deleted in new
chr5	65781415	65823328	chr5:65781415-65823328	0	+	65781415	65822915	789624	8	6,136,367,148,187,129,137,548,	0,4359,6702,11038,28099,28621,30839,41365,
#Partially deleted in new
chr5	65788362	65871725	chr5:65788362-65871725	0	+	65788362	65871471	789624	7	122,202,187,129,137,48,281,	0,4091,21152,21674,23892,72445,83082,
#Partially deleted in new
chr5	65809125	65812271	chr5:65809125-65812271	0	+	65809125	65809125	8553170	4	284,187,129,17,	0,389,911,3129,
#Partially deleted in new
chr5	65818720	65823237	chr5:65818720-65823237	0	+	65818720	65818720	8553170	2	263,457,	0,4060,
#Deleted in new
chr5	65924628	65925135	chr5:65924628-65925135	3	-	65924628	65924628	8553170	1	507,	0,
#Partially deleted in new
chr5	65926474	66082549	chr5:65926474-66082549	3	+	65992718	66078530	0	26	332,48,198,118,79,90,57,64,75,145,73,130,116,70,100,122,174,186,115,184,1546,123,207,93,75,4127,	0,62160,66235,68272,85574,87074,88194,94847,96815,97831,99005,99373,99827,101799,111908,116602,117662,119878,122192,124308,126931,145694,148549,149841,150400,151948,
#Partially deleted in new
chr5	65926555	66080516	chr5:65926555-66080516	1	+	65992718	66078530	0	25	251,48,198,118,79,90,57,64,75,145,73,130,116,70,100,122,174,186,115,184,1546,207,93,75,2094,	0,62079,66154,68191,85493,86993,88113,94766,96734,97750,98924,99292,99746,101718,111827,116521,117581,119797,122111,124227,126850,148468,149760,150319,151867,
#Partially deleted in new
chr5	65926560	65984845	chr5:65926560-65984845	0	+	65926560	65926560	8553170	2	246,91,	0,58194,
#Partially deleted in new
chr5	65926566	66078751	chr5:65926566-66078751	1	+	65992718	66078530	789624	19	240,48,198,118,79,90,57,64,75,145,73,130,116,70,144,207,93,75,329,	0,62068,66143,68180,85482,86982,88102,94755,96723,97739,98913,99281,99735,101707,142310,148457,149749,150308,151856,
#Partially deleted in new
chr5	65926573	66081023	chr5:65926573-66081023	1	+	65992718	66078530	0	24	233,48,198,118,79,90,57,64,75,145,73,130,116,70,100,122,174,186,115,184,1546,93,75,2601,	0,62061,66136,68173,85475,86975,88095,94748,96716,97732,98906,99274,99728,101700,111809,116503,117563,119779,122093,124209,126832,149742,150301,151849,
#Partially deleted in new
chr5	65926609	66078936	chr5:65926609-66078936	1	+	65992718	66078530	0	24	197,48,198,118,79,90,57,64,75,145,73,130,116,70,100,122,174,186,115,184,1546,207,93,514,	0,62025,66100,68137,85439,86939,88059,94712,96680,97696,98870,99238,99692,101664,111773,116467,117527,119743,122057,124173,126796,148414,149706,151813,
#Partially deleted in new
chr5	65926726	66078546	chr5:65926726-66078546	1	+	65992718	66078530	0	25	80,48,198,118,79,90,57,64,75,145,73,130,116,70,100,122,162,186,115,184,1546,207,93,75,124,	0,61908,65983,68020,85322,86822,87942,94595,96563,97579,98753,99121,99575,101547,111656,116350,117410,119626,121940,124056,126679,148297,149589,150148,151696,
#Partially deleted in new
chr5	65926772	66078565	chr5:65926772-66078565	1	+	65992718	66078530	0	26	34,48,198,118,79,90,57,64,75,145,73,130,116,70,100,122,174,186,115,184,1546,144,207,93,75,143,	0,61862,65937,67974,85276,86776,87896,94549,96517,97533,98707,99075,99529,101501,111610,116304,117364,119580,121894,124010,126633,142104,148251,149543,150102,151650,
#Deleted in new
chr5	65961182	65961319	chr5:65961182-65961319	3	-	65961182	65961182	8553170	1	137,	0,
#Partially deleted in new
chr5	65988632	66078936	chr5:65988632-66078936	1	+	65992718	66078530	0	23	50,198,118,79,90,57,64,75,145,73,130,116,70,100,122,174,186,115,184,1546,93,75,514,	0,4077,6114,23416,24916,26036,32689,34657,35673,36847,37215,37669,39641,49750,54444,55504,57720,60034,62150,64773,87683,88242,89790,
#Partially deleted in new
chr5	66022871	66024373	chr5:66022871-66024373	0	+	66022871	66022871	8553170	2	493,68,	0,1434,
#Deleted in new
chr5	66025305	66025977	chr5:66025305-66025977	0	+	66025305	66025305	8553170	2	247,130,	0,542,
#Partially deleted in new
chr5	66054632	66072294	chr5:66054632-66072294	0	+	66054632	66072294	789624	3	319,144,126,	0,14244,17536,
#Partially deleted in new
chr5	66055061	66078733	chr5:66055061-66078733	0	+	66055061	66055061	8553170	4	65,93,75,311,	0,21254,21813,23361,
#Partially deleted in new
chr5	66068876	66075230	chr5:66068876-66075230	0	+	66068876	66075230	789624	3	144,123,207,	0,3292,6147,
#Deleted in new
chr5	66075145	66076597	chr5:66075145-66076597	0	+	66075145	66075145	8553170	2	85,282,	0,1170,
#Partially deleted in new
chr5	66076109	66078689	chr5:66076109-66078689	0	+	66076109	66076109	8553170	3	299,75,267,	0,765,2313,
#Partially deleted in new
chr5	66076408	66078554	chr5:66076408-66078554	0	+	66076408	66076408	8553170	2	541,132,	0,2014,
#Partially deleted in new
chr5	66139970	66162273	chr5:66139970-66162273	0	+	66159271	66162273	789624	5	41,134,124,116,165,	0,13492,18838,19248,22138,
#Deleted in new
chr5	66144155	66144795	chr5:66144155-66144795	3	-	66144155	66144155	8553170	2	344,137,	0,503,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	66144217	66183615	chr5:66144217-66183615	3	+	66144376	66178868	789624	12	320,134,116,165,179,131,115,120,363,96,145,4897,	0,9245,15001,17891,18196,19574,20565,25833,26367,30728,33296,34501,
#Partially deleted in new
chr5	66144217	66157738	chr5:66144217-66157738	1	+	66144376	66156072	789624	3	320,134,1674,	0,9245,11847,
#Partially deleted in new
chr5	66144263	66153723	chr5:66144263-66153723	0	+	66144263	66144263	8553170	3	274,28,156,	0,9199,9304,
#Partially deleted in new
chr5	66144306	66153790	chr5:66144306-66153790	0	+	66144306	66144306	8553170	2	231,328,	0,9156,
#Partially deleted in new
chr5	66144314	66179179	chr5:66144314-66179179	0	+	66144376	66158842	789624	13	128,29,124,116,165,179,131,115,120,363,96,145,461,	0,9253,14494,14904,17794,18099,19477,20468,25736,26270,30631,33199,34404,
#Partially deleted in new
chr5	66144314	66178857	chr5:66144314-66178857	0	+	66144376	66158912	789624	13	223,134,124,116,165,179,131,115,120,363,96,142,139,	0,9148,14494,14904,17794,18099,19477,20468,25736,26270,30631,33202,34404,
#Partially deleted in new
chr5	66144335	66170628	chr5:66144335-66170628	0	+	66144335	66144335	8553170	10	202,134,2868,116,165,179,131,115,120,44,	0,9127,11729,14883,17773,18078,19456,20447,25715,26249,
#Partially deleted in new
chr5	66144834	66179114	chr5:66144834-66179114	1	+	66159271	66178868	789624	13	349,134,124,116,165,179,131,115,120,363,96,145,396,	0,8628,13974,14384,17274,17579,18957,19948,25216,25750,30111,32679,33884,
#Partially deleted in new
chr5	66158126	66180811	chr5:66158126-66180811	0	+	66158126	66158126	8553170	12	104,124,116,165,179,131,115,120,363,96,145,2093,	0,682,1092,3982,4287,5665,6656,11924,12458,16819,19387,20592,
#Partially deleted in new
chr5	66158699	66162236	chr5:66158699-66162236	0	+	66158699	66158699	8553170	2	635,128,	0,3409,
#Partially deleted in new
chr5	66159105	66170815	chr5:66159105-66170815	0	+	66159105	66159105	8553170	6	229,165,1509,115,120,231,	0,3003,3308,5677,10945,11479,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	66163582	66180879	chr5:66163582-66180879	0	+	66163582	66163582	8553170	5	6588,363,96,145,2161,	0,7002,11363,13931,15136,
#Partially deleted in new
chr5	66163791	66170649	chr5:66163791-66170649	0	+	66163791	66164657	789624	4	131,290,120,65,	0,816,6259,6793,
#Deleted in new
chr5	66174623	66179037	chr5:66174623-66179037	0	+	66174623	66174623	8553170	3	418,145,319,	0,2890,4095,
#Deleted in new
chr5	66177326	66178939	chr5:66177326-66178939	0	+	66177326	66177326	8553170	2	332,221,	0,1392,
#Partially deleted in new
chr5	66206211	66209447	chr5:66206211-66209447	3	-	66206211	66206211	8553170	2	442,120,	0,3116,
#Partially deleted in new
chr5	66298467	66322944	chr5:66298467-66322944	3	+	66298467	66298467	8553170	4	71,104,158,112,	0,9204,19801,24365,
#Partially deleted in new
chr5	66507543	66511604	chr5:66507543-66511604	3	-	66507543	66507543	789624	3	441,172,48,	0,1232,4013,
#Deleted in new
chr5	66572056	66572546	chr5:66572056-66572546	7	+	66572056	66572056	16724991	1	490,	0,
#Partially deleted in new
chr5	66596360	67169595	chr5:66596360-67169595	1	+	66596655	67167051	0	29	658,154,125,32,89,70,79,158,76,210,102,133,68,86,209,139,133,166,102,123,113,128,236,201,230,123,137,182,6449,	0,163348,192309,303590,458043,493801,499236,504074,506175,508005,513737,517726,522321,524656,533849,535452,537153,538162,540202,545754,546060,548308,548783,553028,556276,557097,564095,566246,566786,
#Partially deleted in new
chr5	66596379	66986523	chr5:66596379-66986523	1	+	66596655	66986486	0	6	639,154,125,32,36,80,	0,163329,192290,303571,320603,390064,
#Partially deleted in new
chr5	66596655	66986486	chr5:66596655-66986486	1	+	66596655	66986486	789624	5	363,154,125,32,43,	0,163053,192014,303295,389788,
#Deleted in new
chr5	66622867	66623177	chr5:66622867-66623177	7	+	66622867	66622867	16724991	1	310,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	66662330	66662988	chr5:66662330-66662988	3	+	66662330	66662330	8553170	1	658,	0,
#Partially deleted in new
chr5	66738030	66788705	chr5:66738030-66788705	0	+	66738030	66738030	8553170	4	227,154,50,36,	0,21678,45304,50639,
#Partially deleted in new
chr5	66759727	66930961	chr5:66759727-66930961	0	+	66759727	66930753	789624	4	135,125,32,215,	0,28942,140223,171019,
#Partially deleted in new
chr5	66759729	66986523	chr5:66759729-66986523	0	+	66759729	66902727	789624	5	133,125,32,88,80,	0,28940,140221,142919,226714,
#Partially deleted in new
chr5	66788686	66792539	chr5:66788686-66792539	0	+	66788686	66788686	8553170	2	108,354,	0,3499,
#Partially deleted in new
chr5	66788731	66986523	chr5:66788731-66986523	0	+	66788731	66986486	789624	5	63,32,36,69,80,	0,111219,128251,174987,197712,
#Partially deleted in new
chr5	66788780	66986523	chr5:66788780-66986523	0	+	66788780	66902727	789624	5	14,75,32,88,80,	0,81997,111170,113868,197663,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	66828773	67115075	chr5:66828773-67115075	1	+	66828843	67114248	789624	11	109,32,36,89,70,79,158,76,210,102,989,	0,71177,88209,225630,261388,266823,271661,273762,275592,281324,285313,
#Partially deleted in new
chr5	66828775	67167264	chr5:66828775-67167264	3	+	66828843	67167051	0	28	107,32,36,89,70,79,158,76,210,102,133,68,86,209,139,133,166,102,123,113,128,236,201,230,123,137,182,4118,	0,71175,88207,225628,261386,266821,271659,273760,275590,281322,285311,289906,292241,301434,303037,304738,305747,307787,313339,313645,315893,316368,320613,323861,324682,331680,333831,334371,
#Partially deleted in new
chr5	66828775	66917373	chr5:66828775-66917373	0	+	66828775	66828775	8553170	3	107,32,391,	0,71175,88207,
#Partially deleted in new
chr5	66828861	66986523	chr5:66828861-66986523	0	+	66828861	66964046	789624	6	21,32,36,81,22,80,	0,71089,88121,134845,135178,157582,
#Partially deleted in new
chr5	66958869	67167051	chr5:66958869-67167051	1	+	66959247	67167051	0	28	425,81,89,70,9,79,158,76,210,102,133,68,86,209,139,133,166,102,123,113,128,236,201,230,123,137,182,3905,	0,4837,95534,131292,135287,136727,141565,143666,145496,151228,155217,159812,162147,171340,172943,174644,175653,177693,183245,183551,185799,186274,190519,193767,194588,201586,203737,204277,
#Partially deleted in new
chr5	66958896	66986523	chr5:66958896-66986523	1	+	66959247	66986486	789624	3	398,81,80,	0,4810,27547,
#Partially deleted in new
chr5	66958987	67090203	chr5:66958987-67090203	0	+	66959247	67090203	789624	3	307,89,42,	0,95416,131174,
#Partially deleted in new
chr5	67001382	67003953	chr5:67001382-67003953	3	-	67001382	67001382	8553170	2	667,110,	0,2461,
#Partially deleted in new
chr5	67004619	67167051	chr5:67004619-67167051	1	+	67004993	67167051	0	26	466,89,70,79,158,76,210,102,133,68,86,209,139,133,166,102,123,113,128,236,201,230,123,137,182,3905,	0,49784,85542,90977,95815,97916,99746,105478,109467,114062,116397,125590,127193,128894,129903,131943,137495,137801,140049,140524,144769,148017,148838,155836,157987,158527,
#Partially deleted in new
chr5	67004654	67102550	chr5:67004654-67102550	0	+	67004993	67102550	789624	7	37,134,89,70,79,158,15,	0,297,49749,85507,90942,95780,97881,
#Partially deleted in new
chr5	67004751	67104575	chr5:67004751-67104575	0	+	67004993	67102519	789624	7	334,89,70,79,158,105,210,	0,49652,85410,90845,95683,97755,99614,
#Deleted in new
chr5	67142163	67143020	chr5:67142163-67143020	0	+	67142163	67142163	8553170	2	74,600,	0,257,
#Partially deleted in new
chr5	67142433	67167283	chr5:67142433-67167283	0	+	67142433	67167051	789624	8	100,128,236,230,123,137,182,4137,	0,2235,2710,10203,11024,18022,20173,20713,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	67179612	67196799	chr5:67179612-67196799	3	-	67182856	67196641	0	3	4973,167,248,	0,6238,16939,
#Deleted in new
chr5	67184521	67186297	chr5:67184521-67186297	0	-	67184521	67184521	8553170	2	64,447,	0,1329,
#Deleted in new
chr5	67268021	67270182	chr5:67268021-67270182	3	+	67268021	67268021	8553170	3	152,244,113,	0,1271,2048,
#Partially deleted in new
chr5	67379377	67775034	chr5:67379377-67775034	3	+	67379377	67379377	8553170	4	251,125,144,37,	0,240413,240768,395620,
#Partially deleted in new
chr5	67463808	67475477	chr5:67463808-67475477	3	-	67463808	67463808	8553170	5	152,74,66,148,63,	0,1445,3064,4097,11606,
#Partially deleted in new
chr5	67465034	67475592	chr5:67465034-67475592	0	-	67465034	67465034	8553170	4	293,66,148,178,	0,1838,2871,10380,
#Deleted in new
chr5	67608653	67609130	chr5:67608653-67609130	7	+	67608653	67608653	16724991	1	477,	0,
#Partially deleted in new
chr5	67619790	67797604	chr5:67619790-67797604	1	+	67619790	67619790	8553170	5	125,76,90,210,255,	0,155207,170658,173292,177559,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	67632265	67646789	chr5:67632265-67646789	3	-	67632265	67632265	789624	3	368,89,184,	0,2041,14340,
#Deleted in new
chr5	67636381	67638942	chr5:67636381-67638942	7	+	67636381	67636381	16724991	1	2561,	0,
#Deleted in new
chr5	67690032	67690437	chr5:67690032-67690437	7	-	67690032	67690032	16724991	1	405,	0,
#Deleted in new
chr5	67692811	67693200	chr5:67692811-67693200	7	-	67692811	67692811	16724991	1	389,	0,
#Partially deleted in new
chr5	67699428	67902600	chr5:67699428-67902600	0	-	67699428	67699428	8553170	4	297,162,69,57,	0,2062,124545,203115,
#Partially deleted in new
chr5	67793213	67801058	chr5:67793213-67801058	1	+	67793213	67793213	789624	3	79,128,1349,	0,4415,6496,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	67793217	67805235	chr5:67793217-67805235	1	+	67793217	67793217	8553170	3	75,128,590,	0,4411,11428,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	67793219	67805238	chr5:67793219-67805238	0	+	67793219	67793219	8553170	2	73,593,	0,11426,
#Partially deleted in new
chr5	67797344	67800077	chr5:67797344-67800077	0	+	67797344	67797344	8553170	2	412,368,	0,2365,
#Deleted in new
chr5	67855734	67855986	chr5:67855734-67855986	7	+	67855734	67855734	16724991	1	252,	0,
#Deleted in new
chr5	68087160	68087494	chr5:68087160-68087494	7	-	68087160	68087160	16724991	1	334,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	68159060	68159146	chr5:68159060-68159146	3	-	68159060	68159060	8553170	1	86,	0,
#Deleted in new
chr5	68159217	68159893	chr5:68159217-68159893	7	-	68159217	68159217	16724991	1	676,	0,
#Partially deleted in new
chr5	68215719	68301821	chr5:68215719-68301821	3	+	68226675	68297601	0	16	230,720,93,75,132,202,80,103,99,181,126,143,177,69,171,4410,	0,10570,57670,58219,63882,64808,65207,76539,77381,77583,77989,78816,79428,79700,80451,81692,
#Partially deleted in new
chr5	68215775	68298753	chr5:68215775-68298753	1	+	68226675	68297601	0	16	178,720,93,75,132,202,80,103,99,181,126,143,177,69,171,1342,	0,10514,57614,58163,63826,64752,65151,76483,77325,77527,77933,78760,79372,79644,80395,81636,
#Partially deleted in new
chr5	68217465	68226542	chr5:68217465-68226542	0	+	68217465	68217465	8553170	2	333,253,	0,8824,
#Partially deleted in new
chr5	68226436	68273681	chr5:68226436-68273681	0	+	68226436	68226436	8553170	2	573,292,	0,46953,
#Partially deleted in new
chr5	68239897	68280582	chr5:68239897-68280582	0	+	68239897	68280582	789624	5	40,93,75,132,55,	0,33492,34041,39704,40630,
#Partially deleted in new
chr5	68280239	68293346	chr5:68280239-68293346	0	+	68280703	68293346	789624	6	24,202,80,103,99,44,	0,288,687,12019,12861,13063,
#Partially deleted in new
chr5	68280306	68293199	chr5:68280306-68293199	0	+	68280703	68293199	789624	4	423,80,103,99,	0,620,11952,12794,
#Partially deleted in new
chr5	68288367	68298583	chr5:68288367-68298583	1	+	68288735	68297601	0	10	384,103,99,181,126,143,177,69,171,1172,	0,3891,4733,4935,5341,6168,6780,7052,7803,9044,
#Partially deleted in new
chr5	68288694	68294612	chr5:68288694-68294612	0	+	68293170	68294612	789624	5	57,99,181,126,77,	0,4406,4608,5014,5841,
#Partially deleted in new
chr5	68290636	68298583	chr5:68290636-68298583	1	+	68290728	68297601	0	10	198,103,99,181,126,143,177,69,171,1172,	0,1622,2464,2666,3072,3899,4511,4783,5534,6775,
#Partially deleted in new
chr5	68290671	68293392	chr5:68290671-68293392	0	+	68290671	68290671	8553170	3	163,103,292,	0,1587,2429,
#Partially deleted in new
chr5	68290681	68295485	chr5:68290681-68295485	0	+	68290728	68293111	789624	7	153,99,181,126,143,177,66,	0,2419,2621,3027,3854,4466,4738,
#Partially deleted in new
chr5	68290799	68298605	chr5:68290799-68298605	0	+	68290799	68290799	8553170	9	1562,99,181,126,143,177,69,171,1194,	0,2301,2503,2909,3736,4348,4620,5371,6612,
#Partially deleted in new
chr5	68292485	68294658	chr5:68292485-68294658	0	+	68292485	68294658	789624	5	38,99,181,126,123,	0,615,817,1223,2050,
#Partially deleted in new
chr5	68292567	68298756	chr5:68292567-68298756	1	+	68293170	68297601	0	9	162,99,181,126,143,177,69,171,1345,	0,533,735,1141,1968,2580,2852,3603,4844,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	68292682	68295743	chr5:68292682-68295743	0	+	68292682	68292682	8553170	6	517,181,126,143,177,324,	0,620,1026,1853,2465,2737,
#Deleted in new
chr5	68374764	68375292	chr5:68374764-68375292	3	+	68374764	68374764	8553170	2	365,6,	0,522,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	68430426	68434481	chr5:68430426-68434481	3	-	68430426	68430426	8553170	3	151,117,142,	0,3042,3913,
#Partially deleted in new
chr5	68523877	68530007	chr5:68523877-68530007	3	+	68523877	68523877	8553170	2	87,500,	0,5630,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	68531689	68533530	chr5:68531689-68533530	3	-	68531689	68531689	8553170	2	228,112,	0,1729,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	68832584	68962158	chr5:68832584-68962158	3	-	68832584	68832584	8553170	3	122,87,290,	0,127955,129284,
#Partially deleted in new
chr5	68854909	68855085	chr5:68854909-68855085	7	-	68854909	68854909	16724991	1	176,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	68873953	68874087	chr5:68873953-68874087	3	+	68873953	68873953	8553170	1	134,	0,
#Partially deleted in new
chr5	68963245	68967845	chr5:68963245-68967845	3	+	68963245	68963245	8553170	2	238,179,	0,4421,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	68970438	68970752	chr5:68970438-68970752	3	-	68970438	68970438	8553170	1	314,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	68970691	69029927	chr5:68970691-69029927	3	-	68970691	68970691	8553170	2	386,140,	0,59096,
#Partially deleted in new
chr5	69026754	69030165	chr5:69026754-69030165	1	-	69026754	69026754	8553170	3	357,75,378,	0,1166,3033,
#Deleted in new
chr5	69068924	69069200	chr5:69068924-69069200	7	-	69068924	69068924	16724991	1	276,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr5	69093645	69131069	chr5:69093645-69131069	3	+	69094255	69129617	789624	16	693,123,67,86,88,88,77,171,289,209,158,130,202,227,129,1623,	0,7161,9416,10985,14703,19494,20774,21591,22280,22748,23593,24853,28048,29553,34358,35801,
#Partially deleted in new
chr5	69093948	69131065	chr5:69093948-69131065	1	+	69116482	69129617	789624	17	390,123,67,86,88,88,77,171,289,209,158,130,6,142,227,129,1619,	0,6858,9113,10682,14400,19191,20471,21288,21977,22445,23290,24550,27798,27805,29250,34055,35498,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	69093990	69104740	chr5:69093990-69104740	1	+	69094255	69104045	789624	4	348,123,67,779,	0,6816,9071,9971,
#Partially deleted in new
chr5	69094088	69104695	chr5:69094088-69104695	0	+	69094255	69104695	789624	3	250,67,65,	0,8973,10542,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	69094197	69104434	chr5:69094197-69104434	1	+	69094255	69104045	789624	3	141,67,473,	0,8864,9764,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	69102571	69123539	chr5:69102571-69123539	0	+	69102571	69102571	8553170	11	557,88,88,77,171,289,209,158,130,202,341,	0,5777,10568,11848,12665,13354,13822,14667,15927,19122,20627,
#Partially deleted in new
chr5	69113111	69136394	chr5:69113111-69136394	3	-	69113111	69113111	8553170	6	170,168,75,203,86,244,	0,2123,14922,17231,21405,23039,
#Partially deleted in new
chr5	69117342	69123420	chr5:69117342-69123420	0	+	69117342	69121758	789624	4	54,130,149,222,	0,1156,4404,5856,
#Partially deleted in new
chr5	69118371	69121895	chr5:69118371-69121895	0	+	69118371	69118371	8553170	2	257,202,	0,3322,
#Partially deleted in new
chr5	69123342	69130126	chr5:69123342-69130126	0	+	69123342	69129617	789624	2	83,680,	0,6104,
#Deleted in new
chr5	69160805	69160939	chr5:69160805-69160939	3	+	69160805	69160805	5263520	1	134,	0,
#Deleted in new
chr5	69160807	69160939	chr5:69160807-69160939	3	+	69160807	69160807	5263520	1	132,	0,
#Partially deleted in new
chr5	69167009	69178245	chr5:69167009-69178245	3	+	69167262	69177631	0	9	274,171,171,183,159,237,141,111,722,	0,898,1163,4260,7241,7867,8387,10229,10514,
#Partially deleted in new
chr5	69167134	69177358	chr5:69167134-69177358	0	+	69167262	69177358	789624	8	149,171,171,183,159,237,141,120,	0,773,1038,4135,7116,7742,8262,10104,
#Partially deleted in new
chr5	69167215	69175063	chr5:69167215-69175063	0	+	69167262	69175063	789624	5	68,171,171,183,187,	0,692,957,4054,7661,
#Partially deleted in new
chr5	69167262	69177630	chr5:69167262-69177630	0	+	69167262	69177630	0	8	21,171,171,183,159,237,141,107,	0,645,910,4007,6988,7614,8134,10261,
#Partially deleted in new
chr5	69167265	69174255	chr5:69167265-69174255	0	+	69167265	69167451	789624	5	220,171,171,183,5,	0,642,907,4004,6985,
#Partially deleted in new
chr5	69174256	69177700	chr5:69174256-69177700	0	+	69174256	69177317	789624	5	153,237,141,59,177,	0,620,1140,3034,3267,
#Partially deleted in new
chr5	69177060	69177697	chr5:69177060-69177697	0	+	69177060	69177060	8553170	2	289,174,	0,463,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	69186358	69189452	chr5:69186358-69189452	3	-	69186358	69186358	8553170	1	3094,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	69189547	69210357	chr5:69189547-69210357	3	+	69189634	69209799	789624	9	221,56,49,75,57,64,52,164,651,	0,2247,5099,6169,7505,12958,13371,18648,20159,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	69189573	69210356	chr5:69189573-69210356	1	+	69189634	69209799	789624	8	195,56,49,75,64,52,164,650,	0,2221,5073,6143,12932,13345,18622,20133,
#Partially deleted in new
chr5	69189591	69202569	chr5:69189591-69202569	0	+	69189634	69197076	789624	6	177,56,49,34,57,64,	0,2203,5055,6125,7461,12914,
#Partially deleted in new
chr5	69189645	69197499	chr5:69189645-69197499	0	+	69189645	69189645	8553170	5	123,56,49,75,447,	0,2149,5001,6071,7407,
#Partially deleted in new
chr5	69189741	69209929	chr5:69189741-69209929	0	+	69189741	69209799	789624	8	27,56,49,57,64,52,164,223,	0,2053,4905,7311,12764,13177,18454,19965,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	69207730	69209801	chr5:69207730-69209801	0	+	69207730	69207730	8553170	2	629,95,	0,1976,
#Partially deleted in new
chr5	69217759	69230129	chr5:69217759-69230129	3	+	69217829	69229225	789624	4	112,64,188,922,	0,8578,10440,11448,
#Partially deleted in new
chr5	69217785	69229231	chr5:69217785-69229231	0	+	69217785	69217785	8553170	3	86,188,24,	0,10414,11422,
#Partially deleted in new
chr5	69217831	69229875	chr5:69217831-69229875	1	+	69228288	69229225	789624	4	284,60,188,668,	0,8510,10368,11376,
#Partially deleted in new
chr5	69217831	69229875	chr5:69217831-69229875	1	+	69228288	69229225	789624	4	280,64,188,668,	0,8506,10368,11376,
#Partially deleted in new
chr5	69217886	69228202	chr5:69217886-69228202	0	+	69217886	69217886	8553170	3	225,60,3,	0,8455,10313,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	69234794	69250795	chr5:69234794-69250795	1	+	69234975	69250795	789624	3	247,60,51,	0,599,15950,
#Partially deleted in new
chr5	69234794	69277429	chr5:69234794-69277429	1	+	69234975	69262254	789624	8	247,60,34,100,87,150,148,323,	0,599,17623,27410,34412,38097,41748,42312,
#Partially deleted in new
chr5	69234840	69272904	chr5:69234840-69272904	0	+	69255510	69272904	789624	10	67,60,34,68,69,111,119,100,87,13,	0,553,17577,19761,20619,23202,24977,27364,34366,38051,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	69234860	69256021	chr5:69234860-69256021	0	+	69234860	69234860	8553170	5	181,60,34,68,562,	0,533,17557,19741,20599,
#Partially deleted in new
chr5	69234872	69277430	chr5:69234872-69277430	3	+	69234975	69277135	0	12	169,60,34,68,69,111,119,100,87,150,148,324,	0,521,17545,19729,20587,23170,24945,27332,34334,38019,41670,42234,
#Partially deleted in new
chr5	69234878	69269293	chr5:69234878-69269293	0	+	69234975	69255467	789624	9	163,60,34,66,69,111,119,100,87,	0,515,17539,19723,20581,23164,24939,27326,34328,
#Deleted in new
chr5	69234882	69235495	chr5:69234882-69235495	0	+	69234882	69234882	8553170	2	159,102,	0,511,
#Partially deleted in new
chr5	69234886	69259874	chr5:69234886-69259874	0	+	69234975	69255467	789624	6	155,60,34,69,111,57,	0,507,17531,20573,23156,24931,
#Partially deleted in new
chr5	69234891	69262207	chr5:69234891-69262207	0	+	69234975	69258059	789624	6	150,60,34,111,119,3,	0,502,17526,23151,24926,27313,
#Partially deleted in new
chr5	69234897	69272951	chr5:69234897-69272951	0	+	69234975	69254607	789624	9	144,60,68,69,111,119,100,87,60,	0,496,19704,20562,23145,24920,27307,34309,37994,
#Partially deleted in new
chr5	69234911	69277305	chr5:69234911-69277305	1	+	69234975	69277135	789624	11	130,60,34,68,69,119,100,87,150,148,199,	0,482,17506,19690,20548,24906,27293,34295,37980,41631,42195,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	69234957	69262294	chr5:69234957-69262294	0	+	69234975	69250795	789624	9	84,60,87,34,68,69,111,119,90,	0,436,15787,17460,19644,20502,23085,24860,27247,
#Partially deleted in new
chr5	69234968	69276569	chr5:69234968-69276569	0	+	69234975	69262254	789624	7	73,60,34,100,87,150,27,	0,425,17449,27236,34238,37923,41574,
#Partially deleted in new
chr5	69235116	69277338	chr5:69235116-69277338	1	+	69255510	69277135	789624	11	337,34,68,69,111,119,100,87,150,148,232,	0,17301,19485,20343,22926,24701,27088,34090,37775,41426,41990,
#Partially deleted in new
chr5	69235142	69272996	chr5:69235142-69272996	0	+	69235142	69235142	8553170	8	311,34,68,69,111,100,87,105,	0,17275,19459,20317,22900,27062,34064,37749,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	69280174	69332716	chr5:69280174-69332716	3	-	69282728	69320540	789624	12	2860,131,175,108,116,83,86,78,87,62,344,68,	0,5162,12013,14618,19837,23672,26642,27776,30943,33810,40062,52474,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	69280692	69320583	chr5:69280692-69320583	1	-	69282728	69320540	789624	11	2342,131,175,108,116,83,86,78,87,62,347,	0,4644,11495,14100,19319,23154,26124,27258,30425,33292,39544,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	69281344	69320583	chr5:69281344-69320583	0	-	69281344	69281344	8553170	6	1690,131,108,116,109,119,	0,3992,13448,18667,38892,39120,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	69282057	69332809	chr5:69282057-69332809	1	-	69285341	69320540	789624	10	977,131,116,83,86,78,87,59,344,45,	0,3279,17954,21789,24759,25893,29060,31927,38179,50707,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	69282476	69332793	chr5:69282476-69332793	1	-	69282728	69311195	789624	13	558,131,175,108,116,83,86,78,87,59,109,116,29,	0,2860,9711,12316,17535,21370,24340,25474,28641,31508,37760,37988,50288,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	69307667	69323847	chr5:69307667-69323847	0	-	69307667	69307667	8553170	3	3537,344,45,	0,12569,16135,
#Deleted in new
chr5	69313370	69313872	chr5:69313370-69313872	7	-	69313370	69313370	16724991	1	502,	0,
#Partially deleted in new
chr5	69313637	69320580	chr5:69313637-69320580	0	-	69313637	69313637	8553170	3	269,62,344,	0,347,6599,
#Partially deleted in new
chr5	69333928	69334249	chr5:69333928-69334249	7	+	69333928	69333928	16724991	1	321,	0,
#Partially deleted in new
chr5	69349935	69350445	chr5:69349935-69350445	7	+	69349935	69349935	16724991	1	510,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	69350983	69369542	chr5:69350983-69369542	3	-	69352060	69369490	0	5	1270,146,59,93,80,	0,4665,4911,15519,18479,
#Partially deleted in new
chr5	69351644	69369503	chr5:69351644-69369503	1	-	69352230	69369490	789624	3	609,93,41,	0,14858,17818,
#Partially deleted in new
chr5	69351725	69370013	chr5:69351725-69370013	1	-	69352060	69369675	0	5	528,146,59,93,357,	0,3923,4169,14777,17931,
#Partially deleted in new
chr5	69351929	69369520	chr5:69351929-69369520	1	-	69352060	69369490	789624	4	324,146,59,58,	0,3719,3965,17533,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	69355491	69369490	chr5:69355491-69369490	1	-	69355644	69369490	789624	4	303,59,93,28,	0,403,11011,13971,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	69364742	69366821	chr5:69364742-69366821	1	-	69364942	69365737	789624	2	1012,319,	0,1760,
#Partially deleted in new
chr5	69364743	69370013	chr5:69364743-69370013	3	-	69364942	69365737	789624	3	1011,93,357,	0,1759,4913,
#Partially deleted in new
chr5	69364744	69369642	chr5:69364744-69369642	1	-	69364942	69365737	789624	3	1010,93,180,	0,1758,4718,
#Partially deleted in new
chr5	69365144	69369490	chr5:69365144-69369490	0	-	69365144	69365737	789624	3	610,93,263,	0,1358,4083,
#Partially deleted in new
chr5	69365238	69369316	chr5:69365238-69369316	0	-	69365238	69365737	789624	3	516,93,152,	0,1264,3926,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	69365330	69367909	chr5:69365330-69367909	0	-	69365330	69365737	789624	3	424,93,71,	0,1172,2508,
#Partially deleted in new
chr5	69365356	69369477	chr5:69365356-69369477	0	-	69365356	69365737	789624	3	398,93,91,	0,1146,4030,
#Partially deleted in new
chr5	69365431	69369465	chr5:69365431-69369465	0	-	69365431	69365737	789624	3	323,93,641,	0,1071,3393,
#Partially deleted in new
chr5	69369292	69382026	chr5:69369292-69382026	0	+	69369292	69369292	8553170	5	172,21,61,84,126,	0,2741,2864,5335,12608,
#Partially deleted in new
chr5	69369296	69414801	chr5:69369296-69414801	1	+	69372208	69414292	789624	18	168,137,184,258,84,157,137,53,126,70,112,183,86,147,150,121,58,771,	0,1738,2737,4533,5331,12604,15500,16746,16883,17099,19737,22534,23858,24057,27100,30752,41196,44734,
#Partially deleted in new
chr5	69369309	69373882	chr5:69369309-69373882	0	+	69372208	69373882	789624	4	155,104,184,53,	0,2144,2724,4520,
#Partially deleted in new
chr5	69369805	69414801	chr5:69369805-69414801	3	+	69371515	69414292	789624	18	479,137,104,258,84,157,137,53,126,70,112,183,86,147,150,121,58,771,	0,1229,1648,4024,4822,12095,14991,16237,16374,16590,19228,22025,23349,23548,26591,30243,40687,44225,
#Partially deleted in new
chr5	69369811	69414801	chr5:69369811-69414801	1	+	69372208	69414292	789624	19	122,137,104,184,258,84,157,137,53,126,70,112,183,86,147,150,121,58,771,	0,1223,1642,2222,4018,4816,12089,14985,16231,16368,16584,19222,22019,23343,23542,26585,30237,40681,44219,
#Partially deleted in new
chr5	69369817	69371469	chr5:69369817-69371469	0	+	69369817	69369817	8553170	3	467,88,16,	0,1266,1636,
#Partially deleted in new
chr5	69369819	69414360	chr5:69369819-69414360	1	+	69382044	69414292	789624	17	114,137,258,84,157,137,53,126,70,112,183,86,147,150,121,58,330,	0,1215,4010,4808,12081,14977,16223,16360,16576,19214,22011,23335,23534,26577,30229,40673,44211,
#Partially deleted in new
chr5	69369820	69414493	chr5:69369820-69414493	0	+	69369820	69369820	8553170	4	113,137,37,463,	0,1214,40693,44210,
#Partially deleted in new
chr5	69369824	69414801	chr5:69369824-69414801	1	+	69372208	69414292	789624	18	109,137,184,258,84,157,137,53,126,70,112,183,86,147,150,121,58,771,	0,1210,2209,4005,4803,12076,14972,16218,16355,16571,19209,22006,23330,23529,26572,30224,40668,44206,
#Partially deleted in new
chr5	69369841	69414801	chr5:69369841-69414801	1	+	69372208	69414292	789624	17	92,184,258,84,157,137,53,126,70,112,183,86,147,150,121,58,771,	0,2192,3988,4786,12059,14955,16201,16338,16554,19192,21989,23313,23512,26555,30207,40651,44189,
#Partially deleted in new
chr5	69370059	69414799	chr5:69370059-69414799	1	+	69372208	69414292	789624	18	225,137,184,258,84,157,137,53,126,70,112,183,86,147,150,121,58,769,	0,975,1974,3770,4568,11841,14737,15983,16120,16336,18974,21771,23095,23294,26337,29989,40433,43971,
#Partially deleted in new
chr5	69370091	69384933	chr5:69370091-69384933	0	+	69382044	69384933	789624	6	193,137,258,84,157,137,	0,943,3738,4536,11809,14705,
#Partially deleted in new
chr5	69370245	69382057	chr5:69370245-69382057	0	+	69372208	69382057	789624	6	39,137,184,258,84,157,	0,789,1788,3584,4382,11655,
#Partially deleted in new
chr5	69370704	69414801	chr5:69370704-69414801	1	+	69372208	69414292	789624	17	467,184,258,84,157,137,53,126,70,112,183,86,147,150,121,58,771,	0,1329,3125,3923,11196,14092,15338,15475,15691,18329,21126,22450,22649,25692,29344,39788,43326,
#Partially deleted in new
chr5	69371034	69414360	chr5:69371034-69414360	1	+	69372208	69414292	789624	16	137,184,84,157,137,53,126,70,112,183,86,147,150,121,58,330,	0,999,3593,10866,13762,15008,15145,15361,17999,20796,22120,22319,25362,29014,39458,42996,
#Partially deleted in new
chr5	69371034	69414799	chr5:69371034-69414799	1	+	69382044	69414292	789624	16	137,258,84,157,137,53,126,70,112,183,86,147,150,121,58,769,	0,2795,3593,10866,13762,15008,15145,15361,17999,20796,22120,22319,25362,29014,39458,42996,
#Partially deleted in new
chr5	69371453	69414301	chr5:69371453-69414301	1	+	69371515	69414292	789624	16	104,258,84,157,137,53,126,70,112,183,86,147,150,121,58,271,	0,2376,3174,10447,13343,14589,14726,14942,17580,20377,21701,21900,24943,28595,39039,42577,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	69384079	69391919	chr5:69384079-69391919	0	+	69384079	69384079	8553170	7	118,137,53,126,70,112,89,	0,717,1963,2100,2316,4954,7751,
#Partially deleted in new
chr5	69386222	69393500	chr5:69386222-69393500	0	+	69386222	69392820	789624	7	83,70,112,183,122,86,147,	0,173,2811,5608,6548,6932,7131,
#Partially deleted in new
chr5	69391967	69414255	chr5:69391967-69414255	0	+	69391967	69414035	789624	6	46,86,147,150,121,225,	0,1187,1386,4429,8081,22063,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	69415064	69442852	chr5:69415064-69442852	1	+	69419385	69441654	0	6	106,1585,149,172,51,1321,	0,3882,17462,17857,25385,26467,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	69415111	69442056	chr5:69415111-69442056	1	+	69419385	69441654	0	7	59,1161,36,149,172,51,525,	0,4259,9489,17415,17810,25338,26420,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	69415115	69442836	chr5:69415115-69442836	1	+	69419385	69441654	0	7	55,1585,36,149,172,51,1305,	0,3831,9485,17411,17806,25334,26416,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	69415115	69444212	chr5:69415115-69444212	3	+	69419385	69441654	0	7	55,1161,36,149,172,51,2681,	0,4255,9485,17411,17806,25334,26416,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	69415126	69444330	chr5:69415126-69444330	1	+	69419385	69441654	0	6	44,1161,149,172,51,2799,	0,4244,17400,17795,25323,26405,
#Partially deleted in new
chr5	69415228	69419821	chr5:69415228-69419821	0	+	69419385	69419821	789624	2	125,451,	0,4142,
#Partially deleted in new
chr5	69415381	69440496	chr5:69415381-69440496	0	+	69419385	69440496	789624	6	343,1161,36,149,172,47,	0,3989,9219,17145,17540,25068,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	69419370	69443157	chr5:69419370-69443157	0	+	69419385	69441654	789624	8	740,73,36,149,172,51,285,75,	0,1088,5230,13156,13551,21079,22161,23712,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	69419385	69442061	chr5:69419385-69442061	1	+	69419385	69441654	789624	7	725,73,36,149,172,51,530,	0,1073,5215,13141,13536,21064,22146,
#Partially deleted in new
chr5	69469882	69470136	chr5:69469882-69470136	7	+	69469882	69469882	16724991	1	254,	0,
#Partially deleted in new
chr5	69477471	69502466	chr5:69477471-69502466	2	-	69477471	69477471	8553170	2	204,93,	0,24902,
#Partially deleted in new
chr5	69477479	69485612	chr5:69477479-69485612	1	-	69477479	69477479	789624	2	196,130,	0,8003,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	69478996	69479265	chr5:69478996-69479265	3	-	69478996	69478996	8553170	1	269,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	69492291	69558104	chr5:69492291-69558104	3	+	69504244	69553671	0	9	368,118,679,162,146,216,172,42,4535,	0,11885,16849,21656,42402,52612,55638,59252,61278,
#Partially deleted in new
chr5	69492789	69553671	chr5:69492789-69553671	1	+	69504244	69553671	0	9	111,118,679,162,146,216,172,42,102,	0,11387,16351,21158,41904,52114,55140,58754,60780,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	69504176	69558104	chr5:69504176-69558104	1	+	69513971	69553671	0	7	118,162,146,216,172,42,4535,	0,9771,30517,40727,43753,47367,49393,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	69530612	69530717	chr5:69530612-69530717	3	-	69530612	69530612	8553170	1	105,	0,
#Partially deleted in new
chr5	69544691	69553999	chr5:69544691-69553999	0	+	69544691	69544691	8553170	5	98,216,172,42,430,	0,212,3238,6852,8878,
#Partially deleted in new
chr5	69544743	69553711	chr5:69544743-69553711	0	+	69544743	69544743	8553170	4	376,172,42,142,	0,3186,6800,8826,
#Partially deleted in new
chr5	69560207	69572844	chr5:69560207-69572844	1	+	69565132	69572578	789624	8	35,89,78,37,87,51,55,400,	0,4892,5923,6381,6759,7519,7945,12237,
#Partially deleted in new
chr5	69560222	69579781	chr5:69560222-69579781	0	+	69560222	69560222	8553170	10	181,89,78,37,87,51,55,106,397,25,	0,4877,5908,6366,6744,7504,7930,12222,18489,19534,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	69560222	69570011	chr5:69560222-69570011	0	+	69565132	69566988	789624	7	20,89,78,87,51,55,1492,	0,4877,5908,6744,7504,7930,8297,
#Partially deleted in new
chr5	69560224	69585596	chr5:69560224-69585596	0	+	69565132	69572465	789624	11	18,89,78,37,87,106,91,88,108,64,3,	0,4875,5906,6364,6742,12220,18487,18796,19532,22141,25369,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr5	69560241	69593767	chr5:69560241-69593767	3	+	69565132	69592198	789624	16	162,89,78,37,87,51,55,106,91,88,108,64,104,103,40,1689,	0,4858,5889,6347,6725,7485,7911,12203,18470,18779,19515,22124,25352,26012,30086,31837,
#Partially deleted in new
chr5	69560246	69592246	chr5:69560246-69592246	1	+	69565132	69592198	789624	8	157,89,78,37,87,51,55,56,	0,4853,5884,6342,6720,7480,7906,31944,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr5	69560293	69592860	chr5:69560293-69592860	0	+	69565132	69566988	789624	15	110,89,78,87,51,55,106,91,88,108,64,104,103,40,782,	0,4806,5837,6673,7433,7859,12151,18418,18727,19463,22072,25300,25960,30034,31785,
#Partially deleted in new
chr5	69565121	69582420	chr5:69565121-69582420	0	+	69565132	69582420	789624	10	67,78,37,87,55,106,91,88,108,55,	0,1009,1467,1845,3031,7323,13590,13899,14635,17244,
#Partially deleted in new
chr5	69565132	69566486	chr5:69565132-69566486	0	+	69565132	69565132	8553170	2	56,356,	0,998,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	69565368	69572550	chr5:69565368-69572550	0	+	69565368	69565368	8553170	6	840,37,87,51,55,106,	0,1220,1598,2358,2784,7076,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	69593472	69594723	chr5:69593472-69594723	0	+	69593472	69593472	8553170	2	233,480,	0,771,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	69607098	69624049	chr5:69607098-69624049	7	+	69607098	69607098	16724991	5	116,82,52,120,703,	0,11214,12915,13241,16248,
#Partially deleted in new
chr5	69618312	69623446	chr5:69618312-69623446	5	+	69618312	69618312	16724991	4	82,52,120,100,	0,1701,2027,5034,
#Deleted in new
chr5	69631962	69636399	chr5:69631962-69636399	7	+	69631962	69631962	16724991	1	4437,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	69639458	69679259	chr5:69639458-69679259	7	-	69639458	69639458	16724991	4	908,85,188,115,	0,2746,6423,39686,
#Partially deleted in new
chr5	69640265	69679193	chr5:69640265-69679193	5	-	69640265	69640265	16724991	4	101,85,188,49,	0,1939,5616,38879,
#Deleted in new
chr5	69653247	69654334	chr5:69653247-69654334	7	+	69653247	69653247	16724991	1	1087,	0,
#Partially deleted in new
chr5	69875270	69920867	chr5:69875270-69920867	7	+	69875270	69875270	16724991	5	49,188,85,175,136,	0,35104,38887,40810,45461,
#Deleted in new
chr5	69898866	69903198	chr5:69898866-69903198	7	-	69898866	69898866	16724991	1	4332,	0,
#Deleted in new
chr5	69985203	69985501	chr5:69985203-69985501	7	-	69985203	69985203	16724991	1	298,	0,
#Partially deleted in new
chr5	70025246	70032696	chr5:70025246-70032696	3	+	70025451	70032387	789624	3	212,109,382,	0,1160,7068,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	70025268	70043113	chr5:70025268-70043113	1	+	70025451	70041740	789624	3	190,109,1590,	0,1138,16255,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	70025355	70030122	chr5:70025355-70030122	1	+	70025451	70029877	789624	3	103,109,357,	0,1051,4410,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	70025372	70043103	chr5:70025372-70043103	1	+	70025451	70041762	789624	4	86,109,108,1363,	0,1034,16151,16368,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	70025533	70042008	chr5:70025533-70042008	1	+	70026441	70041740	789624	3	198,109,485,	0,873,15990,
#Deleted in new
chr5	70025562	70026515	chr5:70025562-70026515	0	+	70025562	70025562	8553170	3	169,60,109,	0,431,844,
#Partially deleted in new
chr5	70025586	70032493	chr5:70025586-70032493	0	+	70025586	70025586	8553170	3	145,109,179,	0,820,6728,
#Partially deleted in new
chr5	70026263	70032694	chr5:70026263-70032694	0	+	70026263	70026263	8553170	2	252,380,	0,6051,
#Partially deleted in new
chr5	70049611	70077592	chr5:70049611-70077592	3	+	70049685	70076571	0	9	155,72,120,201,153,96,111,54,574,	0,13803,16353,17322,17682,19623,21029,26909,27407,
#Partially deleted in new
chr5	70049637	70076706	chr5:70049637-70076706	1	+	70049685	70076571	789624	7	129,72,120,153,96,111,186,	0,13777,16327,17656,19597,21003,26883,
#Partially deleted in new
chr5	70049653	70077592	chr5:70049653-70077592	1	+	70049685	70077033	0	8	113,72,120,201,153,96,111,574,	0,13761,16311,17280,17640,19581,20987,27365,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	70049656	70077596	chr5:70049656-70077596	0	+	70049685	70071332	789624	9	110,72,120,201,153,96,111,109,578,	0,13758,16308,17277,17637,19578,20984,21625,27362,
#Partially deleted in new
chr5	70049663	70077592	chr5:70049663-70077592	1	+	70049685	70076571	0	8	103,72,120,201,153,111,54,574,	0,13751,16301,17270,17630,20977,26857,27355,
#Partially deleted in new
chr5	70049685	70076586	chr5:70049685-70076586	1	+	70049685	70076571	0	8	81,72,120,201,153,96,111,66,	0,13729,16279,17248,17608,19549,20955,26835,
#Partially deleted in new
chr5	70049685	70076586	chr5:70049685-70076586	1	+	70049685	70076571	0	7	81,72,120,201,153,111,66,	0,13729,16279,17248,17608,20955,26835,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	70055819	70057416	chr5:70055819-70057416	3	-	70055819	70055819	8553170	1	1597,	0,
#Partially deleted in new
chr5	70063410	70070755	chr5:70063410-70070755	0	+	70063410	70063410	8553170	6	76,120,201,153,96,115,	0,2554,3523,3883,5824,7230,
#Partially deleted in new
chr5	70067083	70070654	chr5:70067083-70070654	0	+	70067083	70069061	789624	5	51,153,117,96,14,	0,210,1942,2151,3557,
#Partially deleted in new
chr5	70067093	70070849	chr5:70067093-70070849	0	+	70067093	70067093	8553170	4	41,153,96,209,	0,200,2141,3547,
#Partially deleted in new
chr5	70067098	70076927	chr5:70067098-70076927	0	+	70067098	70067098	8553170	4	36,153,111,407,	0,195,3542,9422,
#Partially deleted in new
chr5	70067278	70077251	chr5:70067278-70077251	0	+	70067278	70067278	8553170	5	168,96,111,54,233,	0,1956,3362,9242,9740,
#Partially deleted in new
chr5	70069232	70070753	chr5:70069232-70070753	0	+	70069232	70069232	8553170	2	98,113,	0,1408,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	70070663	70078522	chr5:70070663-70078522	0	+	70070663	70076571	789624	4	88,54,142,761,	0,5857,6355,7098,
#Partially deleted in new
chr5	70094658	70128434	chr5:70094658-70128434	7	-	70094658	70094658	16724991	12	365,165,87,153,168,2112,58,82,100,120,52,82,	0,4026,6057,6803,9758,13649,16619,17667,28635,31625,32019,33694,
#Deleted in new
chr5	70132678	70132973	chr5:70132678-70132973	7	+	70132678	70132678	16724991	1	295,	0,
#Partially deleted in new
chr5	70197254	70207745	chr5:70197254-70207745	7	-	70197254	70197254	16724991	4	136,175,85,188,	0,4613,6626,10303,
#Partially deleted in new
chr5	70219917	70258930	chr5:70219917-70258930	7	-	70219917	70219917	16724991	4	175,85,188,49,	0,2013,5690,38964,
#Partially deleted in new
chr5	70415351	70447526	chr5:70415351-70447526	5	+	70415351	70415351	16724991	16	38,89,78,37,87,51,55,106,91,88,108,64,104,103,40,293,	0,4897,5928,6383,6761,7521,7947,12233,18518,18827,19563,22179,25404,26064,30131,31882,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr5	70415442	70448015	chr5:70415442-70448015	7	+	70415442	70415442	16724991	15	108,89,78,87,51,55,106,91,88,108,64,104,103,40,782,	0,4806,5837,6670,7430,7856,12142,18427,18736,19472,22088,25313,25973,30040,31791,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	70420247	70425159	chr5:70420247-70425159	4	+	70420247	70420247	16724991	6	90,78,87,51,55,1503,	0,1032,1865,2625,3051,3409,
#Deleted in new
chr5	70449635	70450353	chr5:70449635-70450353	3	+	70449635	70449635	8553170	1	718,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	70462243	70479215	chr5:70462243-70479215	7	+	70462243	70462243	16724991	6	116,82,52,120,100,188,	0,11204,12911,13237,16238,16784,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	70462243	70479184	chr5:70462243-70479184	5	+	70462243	70462243	16724991	5	116,82,52,120,703,	0,11204,12911,13237,16238,
#Partially deleted in new
chr5	70473447	70478581	chr5:70473447-70478581	5	+	70473447	70473447	16724991	4	82,52,120,100,	0,1707,2033,5034,
#Partially deleted in new
chr5	70495099	70500903	chr5:70495099-70500903	7	-	70495099	70495099	16724991	3	99,85,187,	0,1937,5617,
#Partially deleted in new
chr5	70516386	70555266	chr5:70516386-70555266	7	-	70516386	70516386	16724991	4	96,85,188,49,	0,1934,5614,38831,
#Partially deleted in new
chr5	70751183	70795914	chr5:70751183-70795914	7	+	70751183	70751183	16724991	5	49,188,85,184,134,	0,34254,38024,39948,44597,
#Deleted in new
chr5	70860284	70860579	chr5:70860284-70860579	7	-	70860284	70860284	16724991	1	295,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	70900664	70908375	chr5:70900664-70908375	3	+	70900869	70907806	789624	3	212,109,642,	0,1160,7069,
#Deleted in new
chr5	70900668	70901921	chr5:70900668-70901921	0	+	70901859	70901921	789624	2	208,120,	0,1133,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	70900686	70918530	chr5:70900686-70918530	1	+	70900869	70917157	789624	3	190,109,1590,	0,1138,16254,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	70900763	70918520	chr5:70900763-70918520	1	+	70900869	70917179	789624	4	113,109,108,1363,	0,1061,16177,16394,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	70900773	70905541	chr5:70900773-70905541	1	+	70900869	70905296	789624	3	103,109,357,	0,1051,4411,
#Partially deleted in new
chr5	70900977	70908115	chr5:70900977-70908115	1	+	70901859	70907806	789624	3	172,109,382,	0,847,6756,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	70900980	70917134	chr5:70900980-70917134	0	+	70901859	70917134	789624	4	169,60,109,194,	0,431,844,15960,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	70900993	70917521	chr5:70900993-70917521	1	+	70901859	70917157	789624	3	156,109,581,	0,831,15947,
#Partially deleted in new
chr5	70901681	70908113	chr5:70901681-70908113	0	+	70901681	70901681	8553170	2	252,380,	0,6052,
#Partially deleted in new
chr5	70925029	70953012	chr5:70925029-70953012	3	+	70925103	70951991	0	9	155,72,120,201,153,96,111,54,574,	0,13809,16359,17328,17688,19628,21036,26911,27409,
#Partially deleted in new
chr5	70925029	70952347	chr5:70925029-70952347	1	+	70925103	70951991	0	7	155,72,120,201,153,111,407,	0,13809,16359,17328,17688,21036,26911,
#Partially deleted in new
chr5	70925055	70952567	chr5:70925055-70952567	1	+	70925103	70951991	789624	7	129,72,120,153,96,111,627,	0,13783,16333,17662,19602,21010,26885,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	70925074	70953016	chr5:70925074-70953016	0	+	70925103	70946757	789624	9	110,72,120,201,153,96,111,109,578,	0,13764,16314,17283,17643,19583,20991,21632,27364,
#Partially deleted in new
chr5	70925094	70953040	chr5:70925094-70953040	1	+	70925103	70952453	0	8	90,72,120,201,153,96,111,602,	0,13744,16294,17263,17623,19563,20971,27344,
#Partially deleted in new
chr5	70925103	70952006	chr5:70925103-70952006	1	+	70925103	70951991	0	8	81,72,120,201,153,96,111,66,	0,13735,16285,17254,17614,19554,20962,26837,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	70931243	70932840	chr5:70931243-70932840	3	-	70931243	70931243	8553170	1	1597,	0,
#Partially deleted in new
chr5	70942471	70946278	chr5:70942471-70946278	0	+	70942471	70942471	8553170	3	87,153,213,	0,246,3594,
#Partially deleted in new
chr5	70942507	70946079	chr5:70942507-70946079	0	+	70942507	70944484	789624	5	51,153,117,96,14,	0,210,1941,2150,3558,
#Partially deleted in new
chr5	70942517	70946274	chr5:70942517-70946274	0	+	70942517	70942517	8553170	4	41,153,96,209,	0,200,2140,3548,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	70946088	70953942	chr5:70946088-70953942	0	+	70946088	70946088	8553170	4	88,54,142,761,	0,5852,6350,7093,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr5	70968482	71020910	chr5:70968482-71020910	1	-	70970103	71012915	0	15	1986,165,87,153,168,2112,58,82,100,120,52,82,100,571,252,	0,5646,7677,8423,11386,15292,18262,19310,30241,33215,33609,35293,42792,43865,52176,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	70968482	70987150	chr5:70968482-70987150	0	-	70968482	70968482	8553170	6	1986,165,87,153,168,3376,	0,5646,7677,8423,11386,15292,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr5	70968482	71024373	chr5:70968482-71024373	1	-	70970103	71024373	0	14	1986,165,87,153,168,2112,58,82,100,120,52,82,126,56,	0,5646,7677,8423,11386,15292,18262,19310,30241,33215,33609,35293,52176,55835,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr5	70968482	71024687	chr5:70968482-71024687	3	-	70970103	71012915	0	17	1986,165,87,153,168,2112,58,82,100,120,52,82,100,571,126,89,73,	0,5646,7677,8423,11386,15292,18262,19310,30241,33215,33609,35293,42792,43865,52176,55835,56132,
#Partially deleted in new
chr5	70970049	71020710	chr5:70970049-71020710	1	-	70970103	71012915	789624	14	419,165,87,153,2112,58,82,100,120,52,82,100,571,52,	0,4079,6110,6856,13725,16695,17743,28674,31648,32042,33726,41225,42298,50609,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	70998120	71020774	chr5:70998120-71020774	0	-	70998120	70998120	8553170	5	703,120,52,82,116,	0,3577,3971,5655,22538,
#Partially deleted in new
chr5	71002929	71011772	chr5:71002929-71011772	0	-	71011757	71011772	8553170	4	651,82,100,61,	0,846,8345,8782,
#Partially deleted in new
chr5	71003597	71020730	chr5:71003597-71020730	0	-	71011757	71012915	789624	5	260,100,75,571,72,	0,7677,8114,8750,17061,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr5	71032669	71067601	chr5:71032669-71067601	3	-	71035676	71062763	0	16	3127,40,103,104,64,108,88,91,106,55,51,87,37,78,89,108,	0,4837,8852,9511,12774,15336,16092,16398,22682,27020,27450,28174,28602,29018,30038,34824,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	71033167	71034400	chr5:71033167-71034400	0	-	71033167	71033167	8553170	2	476,231,	0,1002,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr5	71035015	71067601	chr5:71035015-71067601	0	-	71060908	71062763	789624	15	781,40,103,104,64,108,88,91,106,55,51,87,78,89,108,	0,2491,6506,7165,10428,12990,13746,14052,20336,24674,25104,25828,26672,27692,32478,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr5	71035075	71067650	chr5:71035075-71067650	1	-	71035676	71062763	0	17	721,40,103,104,64,108,88,91,106,55,51,87,37,78,89,98,157,	0,2431,6446,7105,10368,12930,13686,13992,20276,24614,25044,25768,26196,26612,27632,30049,32418,
#Partially deleted in new
chr5	71035581	71067652	chr5:71035581-71067652	1	-	71035676	71062763	789624	8	103,55,51,87,37,78,89,159,	0,24108,24538,25262,25690,26106,27126,31912,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	71047455	71062799	chr5:71047455-71062799	0	-	71047455	71047455	8553170	9	1394,91,106,55,51,87,37,78,92,	0,1612,7896,12234,12664,13388,13816,14232,15252,
#Partially deleted in new
chr5	71048088	71067674	chr5:71048088-71067674	0	-	71048088	71048088	8553170	10	25,397,106,55,51,87,37,78,89,181,	0,673,7263,11601,12031,12755,13183,13599,14619,19405,
#Partially deleted in new
chr5	71055029	71067689	chr5:71055029-71067689	0	-	71055029	71055029	8553170	8	428,55,51,87,37,78,89,35,	0,4660,5090,5814,6242,6658,7678,12625,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	71057874	71062799	chr5:71057874-71062799	0	-	71057874	71057874	8553170	6	1511,55,51,87,78,92,	0,1815,2245,2969,3813,4833,
#Partially deleted in new
chr5	71060506	71067676	chr5:71060506-71067676	0	-	71060506	71060506	8553170	5	424,37,78,89,183,	0,765,1181,2201,6987,
#Partially deleted in new
chr5	71061409	71062763	chr5:71061409-71062763	0	-	71061409	71061409	8553170	2	356,56,	0,1298,
#Partially deleted in new
chr5	71061750	71067648	chr5:71061750-71067648	0	-	71061750	71062763	789624	3	15,89,353,	0,957,5545,
#Partially deleted in new
chr5	71074224	71093193	chr5:71074224-71093193	7	-	71074224	71074224	16724991	5	102,42,172,216,147,	0,2086,5572,8552,18822,
#Partially deleted in new
chr5	71102897	71128753	chr5:71102897-71128753	7	-	71102897	71102897	16724991	9	77,168,2112,58,82,100,120,52,82,	0,1846,5763,8733,9781,20719,23697,24091,25774,
#Deleted in new
chr5	71132992	71133287	chr5:71132992-71133287	7	+	71132992	71132992	16724991	1	295,	0,
#Partially deleted in new
chr5	71197645	71208130	chr5:71197645-71208130	7	-	71197645	71197645	16724991	4	136,175,85,188,	0,4607,6620,10297,
#Partially deleted in new
chr5	71220355	71259238	chr5:71220355-71259238	7	-	71220355	71220355	16724991	4	101,85,188,49,	0,1939,5611,38834,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	71351854	71446342	chr5:71351854-71446342	3	-	71351854	71351854	789624	2	2069,698,	0,93790,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	71353486	71446336	chr5:71353486-71446336	1	-	71353486	71353486	8553170	3	437,141,387,	0,92158,92463,
#Deleted in new
chr5	71372675	71374898	chr5:71372675-71374898	3	-	71372675	71372675	8553170	3	354,87,60,	0,1920,2163,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	71375785	71385993	chr5:71375785-71385993	7	+	71375785	71375785	16724991	4	231,1294,138,178,	0,501,9510,10030,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	71375785	71385794	chr5:71375785-71385794	5	+	71375785	71375785	16724991	4	231,1294,138,254,	0,501,9510,9755,
#Deleted in new
chr5	71375829	71376336	chr5:71375829-71376336	5	+	71375829	71375829	16724991	2	187,50,	0,457,
#Deleted in new
chr5	71377503	71379233	chr5:71377503-71379233	4	+	71377503	71377503	16724991	2	77,759,	0,971,
#Deleted in new
chr5	71445615	71446569	chr5:71445615-71446569	3	+	71445615	71445615	8553170	2	57,510,	0,444,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr5	71455614	71567820	chr5:71455614-71567820	3	+	71455877	71564885	0	39	475,277,110,60,126,134,95,55,144,279,148,159,157,92,193,131,1687,188,223,179,211,131,202,194,385,120,37,93,229,161,151,181,64,187,205,40,256,247,3067,	0,2964,6202,8443,10481,11739,14780,28227,30869,33789,35369,39635,41655,45947,46984,49006,53850,56626,57570,59329,60446,61707,66674,67141,68324,76693,83427,83942,85839,86490,88742,89424,93067,93805,97501,101271,104367,106659,109139,
#Partially deleted in new
chr5	71455658	71509735	chr5:71455658-71509735	1	+	71455877	71509634	789624	18	431,277,110,60,126,134,95,55,144,279,148,159,157,92,193,131,139,131,	0,2920,6158,8399,10437,11695,14736,28183,30825,33745,35325,39591,41611,45903,46940,48962,53806,53946,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr5	71455685	71545477	chr5:71455685-71545477	0	+	71455685	71455685	8553170	32	404,277,110,60,126,134,95,55,144,279,148,159,157,92,193,131,1687,188,223,179,211,131,202,194,385,120,37,93,229,161,151,439,	0,2893,6131,8372,10410,11668,14709,28156,30798,33718,35298,39564,41584,45876,46913,48935,53779,56555,57499,59258,60375,61636,66603,67070,68253,76622,83356,83871,85768,86419,88671,89353,
#Partially deleted in new
chr5	71475760	71476316	chr5:71475760-71476316	7	-	71475760	71475760	16724991	1	556,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	71494464	71511350	chr5:71494464-71511350	0	+	71494464	71494464	8553170	6	944,157,92,193,131,1886,	0,2805,7097,8134,10156,15000,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr5	71522792	71567820	chr5:71522792-71567820	0	+	71522792	71553291	789624	16	157,385,120,37,93,226,161,151,181,64,205,40,256,247,121,3067,	0,1146,9515,16249,16764,18664,19312,21564,22246,25889,30323,34093,37189,39481,39982,41961,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr5	71532373	71567820	chr5:71532373-71567820	0	+	71532373	71562786	789624	14	54,37,226,161,151,181,64,187,205,40,256,247,121,3067,	0,6668,9083,9731,11983,12665,16308,17046,20742,24512,27608,29900,30401,32380,
#Partially deleted in new
chr5	71537651	71537846	chr5:71537651-71537846	7	-	71537651	71537651	16724991	1	195,	0,
#Partially deleted in new
chr5	71587287	71657215	chr5:71587287-71657215	0	+	71587425	71643794	789624	16	267,67,85,102,128,113,65,100,96,81,125,67,157,115,86,473,	0,5638,8992,12371,15218,17068,44833,47655,47863,53715,56483,58923,61809,62781,65381,69455,
#Partially deleted in new
chr5	71587287	71643794	chr5:71587287-71643794	1	+	71587425	71643794	789624	11	267,67,85,102,128,113,65,100,96,81,24,	0,5638,8992,12371,15218,17068,44833,47655,47863,53715,56483,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr5	71587296	71658704	chr5:71587296-71658704	3	+	71587425	71656860	789624	17	258,67,85,102,128,113,114,65,100,96,73,77,67,157,115,86,1962,	0,5629,8983,12362,15209,17059,39343,44824,47646,47854,53706,56522,58914,61800,62772,65372,69446,
#Partially deleted in new
chr5	71587329	71641121	chr5:71587329-71641121	1	+	71587425	71641095	789624	11	225,67,85,102,128,113,114,65,100,96,119,	0,5596,8950,12329,15176,17026,39310,44791,47613,47821,53673,
#Partially deleted in new
chr5	71592870	71603065	chr5:71592870-71603065	0	+	71592870	71592870	8553170	4	122,85,102,560,	0,3409,6788,9635,
#Partially deleted in new
chr5	71596269	71635099	chr5:71596269-71635099	0	+	71596269	71596269	8553170	7	95,102,128,113,114,65,157,	0,3389,6236,8086,30370,35851,38673,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	71602508	71636711	chr5:71602508-71636711	0	+	71602508	71602508	8553170	6	125,113,114,65,100,1561,	0,1847,24131,29612,32434,32642,
#Partially deleted in new
chr5	71604379	71641368	chr5:71604379-71641368	0	+	71604379	71604379	8553170	5	89,65,100,96,366,	0,27741,30563,30771,36623,
#Partially deleted in new
chr5	71626653	71652722	chr5:71626653-71652722	0	+	71626690	71652722	789624	10	100,65,100,96,64,77,67,157,115,54,	0,5467,8289,8497,9450,17165,19557,22443,23415,26015,
#Deleted in new
chr5	71719162	71721048	chr5:71719162-71721048	3	+	71719293	71720615	0	3	290,84,541,	0,717,1345,
#Deleted in new
chr5	71719578	71721048	chr5:71719578-71721048	0	+	71719578	71719578	8553170	2	385,541,	0,929,
#Partially deleted in new
chr5	71754377	71756301	chr5:71754377-71756301	7	-	71754377	71754377	16724991	2	426,410,	0,1514,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	72095854	72108000	chr5:72095854-72108000	3	-	72095854	72095854	8553170	6	2116,159,157,76,57,76,	0,2424,2903,5068,7723,12070,
#Partially deleted in new
chr5	72107233	72209570	chr5:72107233-72209570	3	+	72107531	72205239	789624	7	482,102,83,141,6502,239,4487,	0,8464,76509,79380,86632,96329,97850,
#Partially deleted in new
chr5	72107233	72183823	chr5:72107233-72183823	0	+	72107531	72183823	789624	4	76,321,102,81,	0,161,8464,76509,
#Deleted in new
chr5	72107476	72116030	chr5:72107476-72116030	0	+	72107476	72107476	8553170	2	239,333,	0,8221,
#Partially deleted in new
chr5	72107476	72195422	chr5:72107476-72195422	0	+	72107531	72116447	789624	6	239,102,32,83,141,1557,	0,8221,8945,76266,79137,86389,
#Partially deleted in new
chr5	72107485	72195314	chr5:72107485-72195314	0	+	72107531	72195314	789624	6	230,102,83,141,51,1449,	0,8212,76257,79128,85792,86380,
#Partially deleted in new
chr5	72169466	72169540	chr5:72169466-72169540	3	+	72169466	72169466	5263520	1	74,	0,
#Partially deleted in new
chr5	72179627	72195440	chr5:72179627-72195440	0	+	72186622	72195440	789624	4	280,83,141,1575,	0,4115,6986,14238,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	72219408	72320261	chr5:72219408-72320261	3	-	72220908	72320221	0	11	1740,168,143,103,116,79,115,59,71,78,113,	0,4274,6648,8857,13034,14710,18605,76122,78223,94672,100740,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	72219527	72320255	chr5:72219527-72320255	1	-	72220908	72297685	789624	11	1621,168,143,103,116,79,115,59,71,78,75,	0,4155,6529,8738,12915,14591,18486,76003,78104,94553,100653,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	72219528	72229553	chr5:72219528-72229553	0	-	72219528	72219528	8553170	4	1620,168,143,2504,	0,4154,6528,7521,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	72220048	72220773	chr5:72220048-72220773	0	-	72220048	72220048	8553170	2	279,223,	0,502,
#Partially deleted in new
chr5	72220836	72320231	chr5:72220836-72320231	1	-	72220908	72320221	0	12	312,168,143,103,116,79,115,42,59,71,78,83,	0,2846,5220,7429,11606,13282,17177,20810,74694,76795,93244,99312,
#Partially deleted in new
chr5	72221088	72320222	chr5:72221088-72320222	0	-	72221088	72297685	789624	10	60,168,143,103,116,79,115,59,71,42,	0,2594,4968,7177,11354,13030,16925,74442,76543,99092,
#Deleted in new
chr5	72222448	72223730	chr5:72222448-72223730	0	-	72222448	72222448	8553170	2	79,48,	0,1234,
#Partially deleted in new
chr5	72223802	72238130	chr5:72223802-72238130	0	-	72223802	72223802	8553170	7	48,143,226,103,116,79,117,	0,2254,3247,4463,8640,10316,14211,
#Partially deleted in new
chr5	72226092	72288872	chr5:72226092-72288872	0	-	72226092	72226092	8553170	6	107,103,116,79,115,58,	0,2173,6350,8026,11921,62722,
#Partially deleted in new
chr5	72227762	72320239	chr5:72227762-72320239	1	-	72228197	72297685	789624	8	606,116,79,115,59,71,78,59,	0,4680,6356,10251,67768,69869,86318,92418,
#Partially deleted in new
chr5	72238024	72307962	chr5:72238024-72307962	0	-	72238024	72238024	8553170	4	104,59,71,64,	0,57506,59607,69874,
#Partially deleted in new
chr5	72238074	72320209	chr5:72238074-72320209	0	-	72238074	72238074	8553170	6	54,227,59,71,78,61,	0,3387,57456,59557,76006,82074,
#Partially deleted in new
chr5	72294553	72320191	chr5:72294553-72320191	0	-	72294553	72294553	8553170	5	235,59,71,78,43,	0,977,3078,19527,25595,
#Partially deleted in new
chr5	72295314	72320228	chr5:72295314-72320228	1	-	72295526	72320221	789624	4	275,71,78,80,	0,2317,18766,24834,
#Partially deleted in new
chr5	72295548	72320646	chr5:72295548-72320646	0	-	72295548	72295548	8553170	5	41,71,78,293,30,	0,2083,18532,24685,25068,
#Partially deleted in new
chr5	72295548	72320238	chr5:72295548-72320238	0	-	72295548	72295548	8553170	4	41,71,78,239,	0,2083,18532,24451,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	72314396	72314688	chr5:72314396-72314688	3	-	72314396	72314396	8553170	1	292,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	72320366	72368395	chr5:72320366-72368395	3	+	72320382	72358427	789624	10	143,93,130,118,79,92,114,75,114,10193,	0,1805,6245,10891,14651,15427,18255,22595,32274,37836,
#Partially deleted in new
chr5	72320366	72359352	chr5:72320366-72359352	1	+	72326710	72358427	789624	8	143,93,130,92,114,75,114,1150,	0,1805,6245,15427,18255,22595,32274,37836,
#Partially deleted in new
chr5	72320366	72359352	chr5:72320366-72359352	1	+	72335816	72358427	789624	9	143,93,130,118,92,114,75,114,1150,	0,1805,6245,10891,15427,18255,22595,32274,37836,
#Partially deleted in new
chr5	72320367	72352757	chr5:72320367-72352757	0	+	72320382	72335811	789624	8	142,93,130,118,92,114,75,117,	0,1804,6244,10890,15426,18254,22594,32273,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	72320372	72360225	chr5:72320372-72360225	0	+	72320382	72358427	789624	11	137,93,130,118,79,92,114,75,114,621,622,	0,1799,6239,10885,14645,15421,18249,22589,32268,37830,39231,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	72320372	72359228	chr5:72320372-72359228	0	+	72320382	72320607	789624	10	807,93,130,118,79,92,114,75,114,1026,	0,1799,6239,10885,14645,15421,18249,22589,32268,37830,
#Partially deleted in new
chr5	72320372	72338671	chr5:72320372-72338671	0	+	72320382	72331319	789624	6	137,93,118,79,92,50,	0,1799,10885,14645,15421,18249,
#Partially deleted in new
chr5	72320375	72359233	chr5:72320375-72359233	1	+	72320382	72358427	789624	7	134,93,92,114,75,114,1031,	0,1796,15418,18246,22586,32265,37827,
#Partially deleted in new
chr5	72320387	72358384	chr5:72320387-72358384	0	+	72335062	72358384	789624	9	122,93,130,79,92,114,75,114,182,	0,1784,6224,14630,15406,18234,22574,32253,37815,
#Partially deleted in new
chr5	72320397	72358912	chr5:72320397-72358912	0	+	72320397	72338626	789624	8	112,93,130,92,114,75,114,710,	0,1774,6214,15396,18224,22564,32243,37805,
#Partially deleted in new
chr5	72320398	72352646	chr5:72320398-72352646	0	+	72320398	72320398	8553170	9	111,56,93,118,79,92,114,75,6,	0,922,1773,10859,14619,15395,18223,22563,32242,
#Partially deleted in new
chr5	72335558	72358838	chr5:72335558-72358838	0	+	72335558	72335558	8553170	5	327,114,75,114,636,	0,3063,7403,17082,22644,
#Deleted in new
chr5	72381793	72382393	chr5:72381793-72382393	7	+	72381793	72381793	16724991	1	600,	0,
#Deleted in new
chr5	72417488	72418335	chr5:72417488-72418335	7	+	72417488	72417488	16724991	1	847,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	72439902	72442387	chr5:72439902-72442387	3	-	72439902	72439902	8553170	1	2485,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	72442651	72507727	chr5:72442651-72507727	3	-	72443755	72461496	789624	5	1640,175,192,1346,477,	0,4591,13752,17513,64599,
#Partially deleted in new
chr5	72460961	72507366	chr5:72460961-72507366	0	-	72461111	72461496	789624	4	181,181,71,116,	0,368,33261,46289,
#Partially deleted in new
chr5	72461304	72507393	chr5:72461304-72507393	0	-	72461304	72461496	789624	4	206,74,71,143,	0,32282,32918,45946,
#Deleted in new
chr5	72574119	72574828	chr5:72574119-72574828	0	-	72574119	72574119	8553170	2	393,132,	0,577,
#Partially deleted in new
chr5	72574119	72660669	chr5:72574119-72660669	3	-	72574119	72574119	789624	3	390,101,103,	0,632,86447,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	72687111	72761665	chr5:72687111-72761665	3	-	72687111	72687111	8553170	5	445,48,182,232,51,	0,2796,3411,6439,74503,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	72690548	72762727	chr5:72690548-72762727	0	-	72690548	72690548	8553170	3	156,56,118,	0,71066,72061,
#Deleted in new
chr5	72725418	72726151	chr5:72725418-72726151	7	+	72725418	72725418	16724991	1	733,	0,
#Deleted in new
chr5	72733832	72734209	chr5:72733832-72734209	7	+	72733832	72733832	16724991	1	377,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	72768701	72768811	chr5:72768701-72768811	3	+	72768701	72768701	8553170	1	110,	0,
#Partially deleted in new
chr5	72794404	72816565	chr5:72794404-72816565	3	-	72794404	72794404	8553170	2	80,413,	0,21748,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr5	72816311	72916733	chr5:72816311-72916733	1	+	72816737	72905410	0	25	441,114,76,150,107,134,82,123,119,61,169,153,226,172,87,108,159,88,99,96,76,100,75,143,8025,	0,32073,34932,39462,45496,49284,56327,59303,60916,66155,66752,70758,71766,73474,75498,76827,77065,77304,80146,80744,83694,84662,87397,88991,92397,
#Partially deleted in new
chr5	72816648	72883097	chr5:72816648-72883097	0	+	72816737	72872694	789624	9	104,114,76,150,82,123,119,61,34,	0,31736,34595,39125,55990,58966,60579,65818,66415,
#Partially deleted in new
chr5	72816671	72905429	chr5:72816671-72905429	1	+	72816737	72905410	0	23	81,114,76,107,134,82,123,119,61,169,153,226,172,87,108,159,88,99,96,76,100,75,127,	0,31713,34572,45136,48924,55967,58943,60556,65795,66392,70398,71406,73114,75138,76467,76705,76944,79786,80384,83334,84302,87037,88631,
#Partially deleted in new
chr5	72816792	72865693	chr5:72816792-72865693	0	+	72816792	72816792	8553170	5	162,114,82,107,98,	0,31592,34445,45015,48803,
#Partially deleted in new
chr5	72848169	72861915	chr5:72848169-72861915	0	+	72848169	72848169	8553170	5	82,114,115,150,108,	0,215,3035,7604,13638,
#Partially deleted in new
chr5	72848183	72908951	chr5:72848183-72908951	3	+	72848393	72905410	0	25	68,114,76,150,107,134,82,123,119,61,169,153,226,172,87,108,159,88,99,96,76,100,75,143,243,	0,201,3060,7590,13624,17412,24455,27431,29044,34283,34880,38886,39894,41602,43626,44955,45193,45432,48274,48872,51822,52790,55525,57119,60525,
#Partially deleted in new
chr5	72848384	72872720	chr5:72848384-72872720	0	+	72848384	72848384	8553170	4	114,76,150,82,	0,2859,7389,24254,
#Partially deleted in new
chr5	72848384	72865731	chr5:72848384-72865731	0	+	72848384	72848384	8553170	4	114,76,107,136,	0,2859,13423,17211,
#Partially deleted in new
chr5	72871746	72883099	chr5:72871746-72883099	0	+	72871746	72871746	8553170	6	143,82,123,119,61,36,	0,892,3868,5481,10720,11317,
#Partially deleted in new
chr5	72872667	72887210	chr5:72872667-72887210	0	+	72872667	72872667	8553170	5	53,119,61,169,141,	0,4560,9799,10396,14402,
#Deleted in new
chr5	72878590	72878663	chr5:72878590-72878663	3	+	72878590	72878590	5263520	1	73,	0,
#Deleted in new
chr5	72878867	72879185	chr5:72878867-72879185	7	-	72878867	72878867	16724991	1	318,	0,
#Partially deleted in new
chr5	72893675	72905580	chr5:72893675-72905580	0	+	72893675	72905410	789624	7	28,99,96,76,100,75,278,	0,2782,3380,6330,7298,10033,11627,
#Partially deleted in new
chr5	72900873	72908913	chr5:72900873-72908913	0	+	72900873	72900873	8553170	4	200,75,143,205,	0,2835,4429,7835,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	72953634	72954274	chr5:72953634-72954274	3	-	72953634	72953634	8553170	1	640,	0,
#Deleted in new
chr5	72955205	72955699	chr5:72955205-72955699	3	-	72955205	72955205	8553170	1	494,	0,
#Partially deleted in new
chr5	72955980	73090522	chr5:72955980-73090522	3	+	72956096	73088090	0	26	149,92,75,142,153,105,99,97,45,73,25,58,176,12,25,43,92,104,130,112,156,133,200,65,165,2455,	0,12517,33446,34497,34731,50464,59645,61231,78676,81162,85310,95368,96351,98179,98544,100084,102452,107860,112669,118761,121357,122199,125802,126780,131608,132087,
#Partially deleted in new
chr5	72956065	73017282	chr5:72956065-73017282	0	+	72956096	73017282	789624	7	64,92,142,153,105,99,71,	0,12432,34412,34646,50379,59560,61146,
#Partially deleted in new
chr5	72956068	73088428	chr5:72956068-73088428	1	+	72956096	73088090	0	25	61,92,75,142,153,105,97,45,73,25,58,176,12,25,43,92,104,130,112,156,133,200,65,165,361,	0,12429,33358,34409,34643,50376,61143,78588,81074,85222,95280,96263,98091,98456,99996,102364,107772,112581,118673,121269,122111,125714,126692,131520,131999,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	72956070	73038123	chr5:72956070-73038123	1	+	72956096	73037999	789624	11	59,92,75,142,153,105,99,97,45,73,347,	0,12427,33356,34407,34641,50374,59555,61141,78586,81072,81706,
#Deleted in new
chr5	72996919	72997642	chr5:72996919-72997642	7	+	72996919	72996919	16724991	1	723,	0,
#Deleted in new
chr5	73020699	73021279	chr5:73020699-73021279	7	-	73020699	73020699	16724991	1	580,	0,
#Partially deleted in new
chr5	73034467	73037192	chr5:73034467-73037192	0	+	73034467	73034467	8553170	2	234,50,	0,2675,
#Partially deleted in new
chr5	73051099	73052856	chr5:73051099-73052856	0	+	73051099	73051099	8553170	2	307,525,	0,1232,
#Partially deleted in new
chr5	73058420	73077440	chr5:73058420-73077440	0	+	73058420	73058420	8553170	5	104,104,130,112,103,	0,5420,10229,16321,18917,
#Partially deleted in new
chr5	73120291	73131817	chr5:73120291-73131817	3	+	73123373	73131730	789624	4	405,708,142,280,	0,3014,8098,11246,
#Partially deleted in new
chr5	73120568	73131809	chr5:73120568-73131809	1	+	73123373	73131730	789624	4	128,708,142,269,	0,2737,7821,10972,
#Partially deleted in new
chr5	73132007	73150592	chr5:73132007-73150592	3	-	73132007	73132007	789624	2	276,173,	0,18412,
#Deleted in new
chr5	73152415	73152938	chr5:73152415-73152938	7	-	73152415	73152415	16724991	1	523,	0,
#Deleted in new
chr5	73173194	73175143	chr5:73173194-73175143	3	+	73173243	73174165	789624	2	675,1084,	0,865,
#Deleted in new
chr5	73173291	73175058	chr5:73173291-73175058	0	+	73173291	73173291	8553170	2	425,36,	0,1731,
#Partially deleted in new
chr5	73291589	73294934	chr5:73291589-73294934	0	+	73291589	73291589	8553170	2	70,375,	0,2970,
#Partially deleted in new
chr5	73291935	73294922	chr5:73291935-73294922	0	+	73291935	73291935	8553170	2	75,363,	0,2624,
#Deleted in new
chr5	73337905	73338533	chr5:73337905-73338533	3	+	73337905	73337905	8553170	2	50,251,	0,377,
#Partially deleted in new
chr5	73382383	73410509	chr5:73382383-73410509	7	+	73382383	73382383	16724991	3	257,171,453,	0,15125,27673,
#Deleted in new
chr5	73410063	73410430	chr5:73410063-73410430	5	+	73410063	73410063	16724991	1	367,	0,
#Deleted in new
chr5	73444826	73446988	chr5:73444826-73446988	0	-	73444826	73444826	8553170	2	351,55,	0,2107,
#Deleted in new
chr5	73446255	73448527	chr5:73446255-73448527	3	-	73446964	73448362	789624	1	2272,	0,
#Deleted in new
chr5	73446356	73446984	chr5:73446356-73446984	3	+	73446356	73446356	8553170	2	399,25,	0,603,
#Partially deleted in new
chr5	73451497	73453395	chr5:73451497-73453395	3	+	73451497	73451497	8553170	2	608,172,	0,1726,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	73454186	73472896	chr5:73454186-73472896	3	-	73454186	73454186	789624	5	133,93,127,63,24,	0,7346,11139,17698,18686,
#Deleted in new
chr5	73497549	73498293	chr5:73497549-73498293	3	-	73497549	73497549	8553170	1	744,	0,
#Partially deleted in new
chr5	73498407	73505495	chr5:73498407-73505495	3	+	73499133	73505238	0	6	151,69,114,202,57,304,	0,726,4080,4508,5939,6784,
#Deleted in new
chr5	73498430	73499651	chr5:73498430-73499651	0	+	73498430	73498430	8553170	2	369,518,	0,703,
#Partially deleted in new
chr5	73498435	73505435	chr5:73498435-73505435	0	+	73498435	73498435	8553170	5	123,114,202,57,244,	0,4052,4480,5911,6756,
#Partially deleted in new
chr5	73498441	73505495	chr5:73498441-73505495	0	+	73498441	73498441	8553170	5	117,69,630,57,304,	0,692,4046,5905,6750,
#Partially deleted in new
chr5	73498448	73505635	chr5:73498448-73505635	1	+	73498667	73505238	0	6	351,69,114,202,57,444,	0,685,4039,4467,5898,6743,
#Partially deleted in new
chr5	73498456	73502685	chr5:73498456-73502685	0	+	73498456	73498456	8553170	3	343,69,198,	0,677,4031,
#Partially deleted in new
chr5	73498472	73504829	chr5:73498472-73504829	0	+	73498472	73498472	8553170	5	86,69,114,202,483,	0,661,4015,4443,5874,
#Partially deleted in new
chr5	73498509	73504403	chr5:73498509-73504403	0	+	73499133	73504403	789624	4	49,69,202,57,	0,624,4406,5837,
#Deleted in new
chr5	73502590	73505493	chr5:73502590-73505493	0	+	73502590	73505238	789624	3	11,202,302,	0,325,2601,
#Deleted in new
chr5	73508684	73509254	chr5:73508684-73509254	7	+	73508684	73508684	16724991	1	570,	0,
#Partially deleted in new
chr5	73552334	73565686	chr5:73552334-73565686	3	-	73552796	73562881	0	9	518,81,67,126,98,66,159,393,555,	0,1071,1987,2526,3153,5240,8795,10258,12797,
#Partially deleted in new
chr5	73552530	73554430	chr5:73552530-73554430	0	-	73552530	73552530	8553170	3	322,81,109,	0,875,1791,
#Partially deleted in new
chr5	73552618	73555208	chr5:73552618-73555208	0	-	73552618	73552618	8553170	4	234,81,67,348,	0,787,1703,2242,
#Partially deleted in new
chr5	73554906	73565396	chr5:73554906-73565396	0	-	73554906	73562881	789624	5	80,98,66,393,265,	0,581,2668,7686,10225,
#Partially deleted in new
chr5	73557430	73562646	chr5:73557430-73562646	0	-	73557430	73557430	8553170	3	210,159,67,	0,3699,5149,
#Partially deleted in new
chr5	73557430	73565667	chr5:73557430-73565667	0	-	73557430	73557430	8553170	4	210,159,393,536,	0,3699,5162,7701,
#Partially deleted in new
chr5	73557433	73561369	chr5:73557433-73561369	0	-	73557433	73557433	8553170	2	207,240,	0,3696,
#Deleted in new
chr5	73562485	73565204	chr5:73562485-73565204	0	-	73562485	73562485	8553170	2	500,73,	0,2646,
#Deleted in new
chr5	73565442	73568432	chr5:73565442-73568432	0	+	73567344	73568432	789624	4	298,173,93,13,	0,1819,2792,2977,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	73565740	73581969	chr5:73565740-73581969	3	+	73567344	73580094	789624	13	172,173,93,185,179,126,136,85,150,102,134,59,2093,	0,1521,2494,2679,3756,4845,6748,11211,12115,13010,13276,13576,14136,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	73565740	73583377	chr5:73565740-73583377	1	+	73570608	73580094	789624	12	172,93,185,179,126,136,85,150,102,134,59,3501,	0,2494,2679,3756,4845,6748,11211,12115,13010,13276,13576,14136,
#Partially deleted in new
chr5	73565742	73580514	chr5:73565742-73580514	0	+	73565742	73580094	789624	12	170,93,185,179,126,136,85,150,102,134,59,638,	0,2492,2677,3754,4843,6746,11209,12113,13008,13274,13574,14134,
#Deleted in new
chr5	73565742	73567677	chr5:73565742-73567677	0	+	73565742	73565742	8553170	2	170,416,	0,1519,
#Deleted in new
chr5	73565753	73567366	chr5:73565753-73567366	0	+	73567344	73567366	789624	2	433,105,	0,1508,
#Partially deleted in new
chr5	73565772	73580199	chr5:73565772-73580199	1	+	73567344	73580094	789624	13	140,173,36,185,179,126,136,85,150,102,134,59,323,	0,1489,2519,2647,3724,4813,6716,11179,12083,12978,13244,13544,14104,
#Partially deleted in new
chr5	73572488	73578416	chr5:73572488-73578416	0	+	73572488	73572488	8553170	3	136,85,561,	0,4463,5367,
#Partially deleted in new
chr5	73626157	73911697	chr5:73626157-73911697	1	+	73684851	73911583	0	35	165,44,148,294,184,181,70,53,61,122,281,208,112,43,124,133,56,49,145,128,141,248,123,118,255,77,179,92,183,132,101,39,48,486,423,	0,58683,123679,126751,147697,150358,154518,168244,169173,206180,214322,220110,222818,226492,231498,231929,238659,239807,241718,241942,243911,246841,256314,257609,259692,261445,265894,267039,268235,271804,275026,278064,278200,283254,285117,
#Partially deleted in new
chr5	73626157	73941992	chr5:73626157-73941992	1	+	73684851	73941013	0	36	165,44,148,294,184,181,70,53,61,122,281,208,112,43,124,133,56,49,145,128,141,248,123,118,255,77,179,92,183,132,101,39,48,486,301,1149,	0,58683,123679,126751,147697,150358,154518,168244,169173,206180,214322,220110,222818,226492,231498,231929,238659,239807,241718,241942,243911,246841,256314,257609,259692,261445,265894,267039,268235,271804,275026,278064,278200,283254,285117,314686,
#Partially deleted in new
chr5	73626157	73941992	chr5:73626157-73941992	3	+	73684851	73941013	0	37	165,44,148,294,184,181,70,53,61,122,281,208,112,43,124,133,56,49,145,128,141,248,123,118,255,77,179,92,183,132,101,39,48,486,301,78,1149,	0,58683,123679,126751,147697,150358,154518,168244,169173,206180,214322,220110,222818,226492,231498,231929,238659,239807,241718,241942,243911,246841,256314,257609,259692,261445,265894,267039,268235,271804,275026,278064,278200,283254,285117,296929,314686,
#Partially deleted in new
chr5	73626195	73752977	chr5:73626195-73752977	0	+	73684851	73752977	789624	5	127,172,44,148,69,	0,922,58645,123641,126713,
#Partially deleted in new
chr5	73684831	73941993	chr5:73684831-73941993	1	+	73684851	73941013	0	35	53,148,294,184,181,70,53,61,122,281,208,112,43,124,133,56,49,145,128,141,248,123,118,255,77,179,92,183,132,101,39,48,486,301,1150,	0,65005,68077,89023,91684,95844,109570,110499,147506,155648,161436,164144,167818,172824,173255,179985,181133,183044,183268,185237,188167,197640,198935,201018,202771,207220,208365,209561,213130,216352,219390,219526,224580,226443,256012,
#Partially deleted in new
chr5	73684831	73941589	chr5:73684831-73941589	1	+	73684851	73941013	0	36	53,148,294,184,181,70,53,61,122,281,208,112,43,124,133,56,49,145,128,141,248,123,118,255,77,179,92,183,132,101,39,48,486,301,78,746,	0,65005,68077,89023,91684,95844,109570,110499,147506,155648,161436,164144,167818,172824,173255,179985,181133,183044,183268,185237,188167,197640,198935,201018,202771,207220,208365,209561,213130,216352,219390,219526,224580,226443,238255,256012,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	73778038	73786491	chr5:73778038-73786491	3	-	73778038	73778038	8553170	3	229,155,172,	0,2237,8281,
#Partially deleted in new
chr5	73794362	73795518	chr5:73794362-73795518	0	+	73794362	73794362	8553170	2	92,188,	0,968,
#Deleted in new
chr5	73803295	73803599	chr5:73803295-73803599	7	-	73803295	73803295	16724991	1	304,	0,
#Partially deleted in new
chr5	73813517	73941187	chr5:73813517-73941187	1	+	73813588	73941013	0	28	156,122,281,208,112,43,124,133,56,49,145,128,141,248,123,118,255,77,179,92,183,132,101,39,48,486,301,344,	0,18820,26962,32750,35458,39132,44138,44569,51299,52447,54358,54582,56551,59481,68954,70249,72332,74085,78534,79679,80875,84444,87666,90704,90840,95894,97757,127326,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	73828011	73828073	chr5:73828011-73828073	3	-	73828011	73828011	8553170	1	62,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	73835084	73849024	chr5:73835084-73849024	0	+	73835084	73835084	8553170	4	172,281,208,49,	0,5395,11183,13891,
#Partially deleted in new
chr5	73863042	73867991	chr5:73863042-73867991	0	+	73863042	73863042	8553170	4	315,56,49,116,	0,1774,2922,4833,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	73882478	73905323	chr5:73882478-73905323	0	+	73882478	73882478	8553170	9	116,118,255,77,179,92,183,6299,966,	0,1288,3371,5124,9573,10718,11914,15483,21879,
#Partially deleted in new
chr5	73885902	73941993	chr5:73885902-73941993	1	+	73885902	73941013	789624	12	202,77,179,92,183,101,39,48,486,301,78,1150,	0,1700,6149,7294,8490,15281,18319,18455,23509,25372,37184,54941,
#Partially deleted in new
chr5	73887484	73893361	chr5:73887484-73893361	0	+	73887484	73887484	8553170	3	195,179,165,	0,4567,5712,
#Partially deleted in new
chr5	73908399	73911702	chr5:73908399-73911702	0	+	73908399	73908399	8553170	2	1498,428,	0,2875,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	73952939	73954014	chr5:73952939-73954014	3	+	73952939	73952939	8553170	1	1075,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	74084067	74103216	chr5:74084067-74103216	3	-	74084067	74084067	8553170	2	100,477,	0,18672,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	74317985	74318285	chr5:74317985-74318285	3	+	74317985	74317985	8553170	1	300,	0,
#Partially deleted in new
chr5	74321630	74340152	chr5:74321630-74340152	3	+	74321630	74321630	8553170	3	227,154,169,	0,17341,18353,
#Partially deleted in new
chr5	74322485	74328297	chr5:74322485-74328297	3	+	74322485	74322485	789624	3	523,126,75,	0,3326,5737,
#Partially deleted in new
chr5	74327994	74334766	chr5:74327994-74334766	3	-	74327994	74327994	8553170	2	291,211,	0,6561,
#Partially deleted in new
chr5	74369375	74536976	chr5:74369375-74536976	3	-	74369375	74369375	789624	3	146,115,307,	0,106962,167294,
#Partially deleted in new
chr5	74627405	74641424	chr5:74627405-74641424	1	-	74634715	74636485	789624	3	2587,1815,1118,	0,7278,12901,
#Partially deleted in new
chr5	74627405	74641424	chr5:74627405-74641424	3	-	74634715	74636485	789624	4	2587,1815,137,1118,	0,7278,10159,12901,
#Partially deleted in new
chr5	74627408	74641424	chr5:74627408-74641424	1	-	74634715	74636266	789624	3	2584,1679,1118,	0,7275,12898,
#Deleted in new
chr5	74629551	74632262	chr5:74629551-74632262	0	-	74629551	74629551	8553170	2	441,130,	0,2581,
#Partially deleted in new
chr5	74629928	74640649	chr5:74629928-74640649	1	-	74634715	74636485	789624	4	64,1815,123,22,	0,4755,10378,10699,
#Partially deleted in new
chr5	74636336	74641424	chr5:74636336-74641424	0	-	74636336	74636485	789624	3	162,125,1118,	0,1157,3970,
#Partially deleted in new
chr5	74636473	74640728	chr5:74636473-74640728	0	-	74636473	74636485	8553170	3	25,137,422,	0,1091,3833,
#Partially deleted in new
chr5	74640022	74721288	chr5:74640022-74721288	1	+	74705224	74721175	789624	14	536,146,66,47,111,102,130,181,87,73,175,91,105,171,	0,49305,53616,56670,56973,65196,73483,75487,76564,78268,78774,80405,80620,81095,
#Partially deleted in new
chr5	74685143	74721288	chr5:74685143-74721288	3	+	74685260	74721175	789624	14	416,146,66,47,111,102,130,181,87,73,175,91,105,171,	0,4184,8495,11549,11852,20075,28362,30366,31443,33147,33653,35284,35499,35974,
#Partially deleted in new
chr5	74685195	74706168	chr5:74685195-74706168	0	+	74685195	74685195	8553170	6	364,146,66,47,111,950,	0,4132,8443,11497,11800,20023,
#Partially deleted in new
chr5	74685205	74689849	chr5:74685205-74689849	0	+	74685205	74685205	8553170	2	354,522,	0,4122,
#Partially deleted in new
chr5	74693474	74705257	chr5:74693474-74705257	0	+	74693474	74693474	8553170	4	230,47,111,39,	0,3218,3521,11744,
#Partially deleted in new
chr5	74713537	74720836	chr5:74713537-74720836	0	+	74713537	74713537	8553170	7	98,181,87,73,175,91,194,	0,1972,3049,4753,5259,6890,7105,
#Partially deleted in new
chr5	74715585	74721288	chr5:74715585-74721288	0	+	74715585	74721175	789624	6	105,73,175,91,105,171,	0,2705,3211,4842,5057,5532,
#Partially deleted in new
chr5	74715645	74716829	chr5:74715645-74716829	0	+	74715645	74715645	8553170	2	45,243,	0,941,
#Partially deleted in new
chr5	74716628	74722616	chr5:74716628-74722616	0	+	74716628	74721339	789624	7	45,73,175,91,105,119,148,	0,1662,2168,3799,4014,4689,5840,
#Partially deleted in new
chr5	74718290	74721287	chr5:74718290-74721287	0	+	74718290	74718290	8553170	5	73,63,91,105,170,	0,618,2137,2352,2827,
#Deleted in new
chr5	74719988	74721288	chr5:74719988-74721288	1	+	74720697	74721175	789624	3	530,105,171,	0,654,1129,
#Deleted in new
chr5	74720487	74722647	chr5:74720487-74722647	0	+	74720487	74721339	789624	4	31,105,119,349,	0,155,830,1811,
#Deleted in new
chr5	74721056	74722629	chr5:74721056-74722629	0	+	74721056	74721056	8553170	2	380,331,	0,1242,
#Partially deleted in new
chr5	74721203	74767371	chr5:74721203-74767371	3	-	74721654	74763742	789624	21	580,183,116,186,139,77,190,100,141,149,81,180,61,89,89,126,98,58,85,87,434,	0,1175,4436,4737,9056,11818,15592,17114,17298,18785,20325,24474,24901,26488,29375,30164,37645,38165,39698,42476,45734,
#Partially deleted in new
chr5	74721205	74767121	chr5:74721205-74767121	1	-	74721654	74763742	789624	20	578,183,116,186,139,77,190,100,149,81,180,61,89,89,126,98,58,85,87,184,	0,1173,4434,4735,9054,11816,15590,17112,18783,20323,24472,24899,26486,29373,30162,37643,38163,39696,42474,45732,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr5	74721257	74767105	chr5:74721257-74767105	1	-	74721654	74763742	789624	22	526,183,116,186,139,77,190,100,141,149,81,180,61,89,89,126,98,58,85,87,118,168,	0,1121,4382,4683,9002,11764,15538,17060,17244,18731,20271,24420,24847,26434,29321,30110,37591,38111,39644,42422,43777,45680,
#Partially deleted in new
chr5	74721272	74736963	chr5:74721272-74736963	0	-	74721272	74721272	8553170	5	511,183,186,77,168,	0,1106,4668,11749,15523,
#Partially deleted in new
chr5	74725671	74738374	chr5:74725671-74738374	0	-	74725671	74725671	8553170	7	84,186,139,174,77,190,57,	0,269,4588,4930,7350,11124,12646,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	74730259	74733388	chr5:74730259-74733388	0	-	74730259	74730259	8553170	2	139,367,	0,2762,
#Partially deleted in new
chr5	74736668	74767146	chr5:74736668-74767146	1	-	74736763	74763742	789624	15	317,100,141,149,81,180,61,89,89,126,98,58,85,87,209,	0,1649,1833,3320,4860,9009,9436,11023,13910,14699,22180,22700,24233,27011,30269,
#Deleted in new
chr5	74739988	74741848	chr5:74739988-74741848	0	-	74739988	74739988	8553170	2	149,320,	0,1540,
#Partially deleted in new
chr5	74740085	74767061	chr5:74740085-74767061	0	-	74740085	74763742	789624	11	52,81,180,61,89,89,98,58,85,87,124,	0,1443,5592,6019,7606,10493,18763,19283,20816,23594,26852,
#Partially deleted in new
chr5	74751378	74767147	chr5:74751378-74767147	0	-	74751378	74758927	789624	5	115,98,58,85,210,	0,7470,7990,9523,15559,
#Partially deleted in new
chr5	74766990	74776910	chr5:74766990-74776910	1	+	74767360	74776651	789624	5	373,188,151,180,307,	0,1940,2223,3640,9613,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	74766991	74780113	chr5:74766991-74780113	3	+	74767360	74776671	789624	6	372,188,151,180,193,3510,	0,1939,2222,3639,6876,9612,
#Partially deleted in new
chr5	74767247	74769554	chr5:74767247-74769554	0	+	74767247	74767247	8553170	3	116,188,341,	0,1683,1966,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	74767262	74771653	chr5:74767262-74771653	0	+	74767262	74767262	8553170	5	101,188,151,180,177,	0,1668,1951,3368,4214,
#Partially deleted in new
chr5	74769297	74776804	chr5:74769297-74776804	0	+	74769297	74776651	789624	3	67,180,201,	0,1333,7306,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	74777573	74866838	chr5:74777573-74866838	3	-	74781459	74841676	789624	13	4435,204,157,151,40,113,129,180,172,86,100,135,88,	0,5357,18456,23306,24016,26919,27582,36266,56852,61391,62500,63971,89177,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	74777573	74866838	chr5:74777573-74866838	1	-	74781459	74841676	789624	12	4435,204,157,151,40,113,129,172,86,100,135,88,	0,5357,18456,23306,24016,26919,27582,56852,61391,62500,63971,89177,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	74777573	74848855	chr5:74777573-74848855	0	-	74813953	74841676	789624	12	4435,204,157,151,40,113,129,180,86,100,135,224,	0,5357,18456,23306,24016,26919,27582,36266,61391,62500,63971,71058,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	74777575	74866344	chr5:74777575-74866344	0	-	74813953	74841676	789624	12	4433,204,157,151,40,113,129,180,86,100,135,180,	0,5355,18454,23304,24014,26917,27580,36264,61389,62498,63969,88589,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	74779308	74779413	chr5:74779308-74779413	3	+	74779308	74779308	8553170	1	105,	0,
#Deleted in new
chr5	74798993	74800100	chr5:74798993-74800100	7	+	74798993	74798993	16724991	1	1107,	0,
#Partially deleted in new
chr5	74813841	74866951	chr5:74813841-74866951	0	-	74813841	74841676	789624	6	178,172,86,100,135,132,	0,20584,25123,26232,27703,52978,
#Partially deleted in new
chr5	74813984	74866387	chr5:74813984-74866387	0	-	74813984	74841676	789624	6	35,172,86,100,135,223,	0,20441,24980,26089,27560,52180,
#Partially deleted in new
chr5	74839024	74865639	chr5:74839024-74865639	0	-	74839024	74841676	789624	4	26,100,135,310,	0,1049,2520,26305,
#Partially deleted in new
chr5	74865892	74867854	chr5:74865892-74867854	3	+	74865892	74865892	789624	1	1962,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	74882655	74882783	chr5:74882655-74882783	3	-	74882655	74882655	8553170	1	128,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	74917725	75023928	chr5:74917725-75023928	3	-	74917725	74917725	8553170	5	253,258,123,114,98,	0,1303,69775,99703,106105,
#Deleted in new
chr5	74929879	74930566	chr5:74929879-74930566	7	+	74929879	74929879	16724991	1	687,	0,
#Deleted in new
chr5	74931661	74931817	chr5:74931661-74931817	7	+	74931661	74931661	16724991	1	156,	0,
#Partially deleted in new
chr5	74990188	74990637	chr5:74990188-74990637	7	-	74990188	74990188	16724991	1	449,	0,
#Deleted in new
chr5	75006712	75007012	chr5:75006712-75007012	7	-	75006712	75006712	16724991	1	300,	0,
#Deleted in new
chr5	75025345	75030899	chr5:75025345-75030899	3	-	75028675	75030037	789624	1	5554,	0,
#Partially deleted in new
chr5	75047718	75052643	chr5:75047718-75052643	3	-	75047718	75047718	789624	2	319,215,	0,4710,
#Partially deleted in new
chr5	75048032	75052843	chr5:75048032-75052843	1	-	75048032	75048032	8553170	3	5,59,415,	0,4136,4396,
#Partially deleted in new
chr5	75068274	75169165	chr5:75068274-75169165	0	-	75068274	75068274	8553170	14	390,72,103,141,991,97,88,116,163,143,138,53,145,187,	0,12293,15997,22986,35953,39246,44238,48291,49860,69581,70571,80301,85926,100704,
#Partially deleted in new
chr5	75068296	75236878	chr5:75068296-75236878	3	-	75068518	75236686	789624	25	368,72,103,141,991,97,88,116,163,143,138,1519,53,145,143,156,110,281,570,44,77,38,110,74,296,	0,12271,15975,22964,35931,39224,44216,48269,49838,69559,70549,77690,80279,85904,100682,120196,124370,125014,127334,131334,138114,142531,153952,162265,168286,
#Partially deleted in new
chr5	75068296	75236878	chr5:75068296-75236878	1	-	75068518	75236686	789624	26	368,72,103,141,991,97,88,116,163,143,138,171,1519,53,145,143,156,110,281,570,44,77,38,110,74,296,	0,12271,15975,22964,35931,39224,44216,48269,49838,69559,70549,75704,77690,80279,85904,100682,120196,124370,125014,127334,131334,138114,142531,153952,162265,168286,
#Deleted in new
chr5	75225423	75225668	chr5:75225423-75225668	7	+	75225423	75225423	16724991	1	245,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	75320154	75336914	chr5:75320154-75336914	3	-	75320154	75320154	8553170	3	329,92,106,	0,14792,16654,
#Partially deleted in new
chr5	75336328	75360758	chr5:75336328-75360758	1	+	75342605	75360342	0	20	289,188,112,88,85,106,107,117,161,248,179,195,159,158,106,171,141,159,155,471,	0,6254,7524,7916,9245,10875,13713,13929,14460,14739,15095,18174,18727,19036,20014,22328,22841,23069,23656,23959,
#Partially deleted in new
chr5	75337167	75362104	chr5:75337167-75362104	3	+	75342605	75360342	0	20	133,188,112,88,85,106,107,117,161,248,179,195,159,158,106,171,141,159,155,1817,	0,5415,6685,7077,8406,10036,12874,13090,13621,13900,14256,17335,17888,18197,19175,21489,22002,22230,22817,23120,
#Partially deleted in new
chr5	75337231	75361423	chr5:75337231-75361423	1	+	75342605	75360342	0	19	69,188,112,88,85,106,107,117,161,248,179,195,158,106,171,141,159,155,1136,	0,5351,6621,7013,8342,9972,12810,13026,13557,13836,14192,17271,18133,19111,21425,21938,22166,22753,23056,
#Partially deleted in new
chr5	75337245	75344030	chr5:75337245-75344030	0	+	75337245	75337245	8553170	3	55,188,178,	0,5337,6607,
#Partially deleted in new
chr5	75338132	75344300	chr5:75338132-75344300	0	+	75342605	75344300	789624	4	171,188,112,56,	0,4450,5720,6112,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	75339531	75342660	chr5:75339531-75342660	0	+	75342605	75342660	789624	2	190,78,	0,3051,
#Deleted in new
chr5	75349862	75351610	chr5:75349862-75351610	0	+	75349862	75349862	8553170	4	286,117,161,543,	0,395,926,1205,
#Deleted in new
chr5	75354307	75355166	chr5:75354307-75355166	0	+	75354307	75354307	8553170	2	390,111,	0,748,
#Partially deleted in new
chr5	75355179	75356449	chr5:75355179-75356449	0	+	75355179	75355179	8553170	2	343,107,	0,1163,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	75356344	75419419	chr5:75356344-75419419	0	-	75356996	75419419	789624	13	668,55,130,129,71,133,96,78,93,87,93,158,79,	0,23074,24727,25604,28297,29557,33247,42965,43860,46627,54666,60531,62996,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr5	75356351	75511286	chr5:75356351-75511286	1	-	75356926	75511207	789624	16	661,130,129,71,133,96,93,87,93,158,84,139,108,117,135,175,	0,24720,25597,28290,29550,33240,43853,46620,54659,60524,62989,69009,70019,102713,149630,154760,
#Deleted in new
chr5	75358681	75360482	chr5:75358681-75360482	0	+	75358681	75360342	789624	4	146,141,155,195,	0,488,1303,1606,
#Deleted in new
chr5	75358689	75360481	chr5:75358689-75360481	0	+	75358689	75360342	789624	3	138,155,194,	0,1295,1598,
#Deleted in new
chr5	75358729	75359761	chr5:75358729-75359761	0	+	75358729	75358729	8553170	3	98,141,364,	0,440,668,
#Deleted in new
chr5	75359916	75360529	chr5:75359916-75360529	0	+	75359916	75359916	8553170	2	223,242,	0,371,
#Deleted in new
chr5	75363759	75364242	chr5:75363759-75364242	3	+	75363759	75363759	8553170	1	483,	0,
#Partially deleted in new
chr5	75368485	75369337	chr5:75368485-75369337	0	-	75368485	75368485	8553170	2	173,101,	0,751,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr5	75368485	75512138	chr5:75368485-75512138	1	-	75379345	75511844	0	19	5706,137,130,129,71,133,96,78,93,87,93,158,84,139,108,117,135,394,380,	0,10851,12586,13463,16156,17416,21106,30824,31719,34486,42525,48390,50855,56875,57885,90579,137496,142626,143273,
#Partially deleted in new
chr5	75368485	75511266	chr5:75368485-75511266	1	-	75379345	75511207	0	17	173,137,130,129,71,133,96,93,87,93,158,84,139,108,117,135,155,	0,10851,12586,13463,16156,17416,21106,31719,34486,42525,48390,50855,56875,57885,90579,137496,142626,
#Partially deleted in new
chr5	75368486	75399380	chr5:75368486-75399380	0	-	75386015	75399380	789624	8	172,137,130,129,71,156,96,71,	0,10850,12585,13462,16155,17415,21105,30823,
#Partially deleted in new
chr5	75368487	75511617	chr5:75368487-75511617	3	-	75379345	75511207	0	18	171,137,130,129,71,133,96,78,93,87,93,158,84,139,108,117,135,506,	0,10849,12584,13461,16154,17414,21104,30822,31717,34484,42523,48388,50853,56873,57883,90577,137494,142624,
#Partially deleted in new
chr5	75368517	75511302	chr5:75368517-75511302	1	-	75379345	75511207	789624	17	141,137,130,129,71,133,96,87,87,93,158,84,139,108,117,135,191,	0,10819,12554,13431,16124,17384,21074,31687,34454,42493,48358,50823,56843,57853,90547,137464,142594,
#Partially deleted in new
chr5	75371120	75506004	chr5:75371120-75506004	0	-	75379345	75506004	789624	16	3071,137,130,129,71,133,96,78,93,87,158,84,139,108,117,23,	0,8216,9951,10828,13521,14781,18471,28189,29084,31851,45755,48220,54240,55250,87944,134861,
#Partially deleted in new
chr5	75372330	75511638	chr5:75372330-75511638	1	-	75374042	75511207	789624	16	1861,130,129,71,133,96,93,87,93,158,84,139,108,117,135,527,	0,8741,9618,12311,13571,17261,27874,30641,38680,44545,47010,53030,54040,86734,133651,138781,
#Partially deleted in new
chr5	75372418	75511617	chr5:75372418-75511617	1	-	75379345	75511207	789624	17	1773,137,130,129,71,133,96,87,87,93,158,84,139,108,117,135,506,	0,6918,8653,9530,12223,13483,17173,27786,30553,38592,44457,46922,52942,53952,86646,133563,138693,
#Partially deleted in new
chr5	75372597	75511620	chr5:75372597-75511620	1	-	75379345	75511207	789624	16	1594,137,130,129,71,133,96,93,87,158,84,139,108,117,135,509,	0,6739,8474,9351,12044,13304,16994,27607,30374,44278,46743,52763,53773,86467,133384,138514,
#Partially deleted in new
chr5	75373269	75511633	chr5:75373269-75511633	1	-	75379345	75511207	0	17	922,137,130,129,71,133,96,93,87,93,158,84,139,108,117,135,522,	0,6067,7802,8679,11372,12632,16322,26935,29702,37741,43606,46071,52091,53101,85795,132712,137842,
#Partially deleted in new
chr5	75373362	75511487	chr5:75373362-75511487	0	-	75425355	75511207	789624	17	829,137,130,129,71,133,96,93,87,93,158,84,208,108,117,135,376,	0,5974,7709,8586,11279,12539,16229,26842,29609,37648,43513,45978,51929,53008,85702,132619,137749,
#Partially deleted in new
chr5	75373739	75511701	chr5:75373739-75511701	1	-	75379345	75511207	0	18	452,137,130,129,71,133,96,78,93,87,93,158,84,139,108,117,135,590,	0,5597,7332,8209,10902,12162,15852,25570,26465,29232,37271,43136,45601,51621,52631,85325,132242,137372,
#Partially deleted in new
chr5	75373962	75385923	chr5:75373962-75385923	0	-	75374188	75385923	789624	5	229,57,129,71,22,	0,7182,7986,10679,11939,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr5	75374096	75511615	chr5:75374096-75511615	1	-	75379345	75511207	0	17	5377,130,129,71,133,96,78,93,87,93,158,84,139,108,117,135,504,	0,6975,7852,10545,11805,15495,25213,26108,28875,36914,42779,45244,51264,52274,84968,131885,137015,
#Partially deleted in new
chr5	75374155	75425473	chr5:75374155-75425473	0	-	75379345	75425473	789624	12	36,137,130,129,71,133,93,87,93,158,84,113,	0,5181,6916,7793,10486,11746,26049,28816,36855,42720,45185,51205,
#Deleted in new
chr5	75374462	75374809	chr5:75374462-75374809	7	+	75374462	75374462	16724991	1	347,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr5	75378517	75511607	chr5:75378517-75511607	1	-	75379345	75511207	789624	15	956,130,129,71,133,93,87,93,158,84,139,108,117,135,496,	0,2554,3431,6124,7384,21687,24454,32493,38358,40823,46843,47853,80547,127464,132594,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr5	75378517	75511638	chr5:75378517-75511638	1	-	75379345	75511207	0	16	956,130,129,71,133,96,93,87,93,158,84,139,108,117,135,527,	0,2554,3431,6124,7384,11074,21687,24454,32493,38358,40823,46843,47853,80547,127464,132594,
#Partially deleted in new
chr5	75379354	75385992	chr5:75379354-75385992	0	-	75384703	75385992	789624	5	119,130,129,71,45,	0,1717,2594,5287,6593,
#Partially deleted in new
chr5	75379399	75511317	chr5:75379399-75511317	0	-	75379399	75511207	789624	14	74,130,129,71,133,96,93,158,84,139,108,117,135,206,	0,1672,2549,5242,6502,10192,31611,37476,39941,45961,46971,79665,126582,131712,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr5	75379454	75511420	chr5:75379454-75511420	0	-	75379454	75379454	8553170	15	19,130,129,71,133,96,2854,93,158,84,139,108,117,135,309,	0,1617,2494,5187,6447,10137,20750,31556,37421,39886,45906,46916,79610,126527,131657,
#Partially deleted in new
chr5	75379459	75400262	chr5:75379459-75400262	0	-	75379459	75400262	789624	5	14,130,129,96,58,	0,1612,2489,10132,20745,
#Partially deleted in new
chr5	75410689	75511283	chr5:75410689-75511283	1	-	75411004	75511207	789624	8	414,158,84,139,108,117,135,172,	0,6186,8651,14671,15681,48375,95292,100422,
#Partially deleted in new
chr5	75417010	75426438	chr5:75417010-75426438	0	-	75425355	75426438	789624	4	23,84,230,68,	0,2330,8259,9360,
#Partially deleted in new
chr5	75425494	75511617	chr5:75425494-75511617	0	-	75425494	75426430	789624	5	5,108,117,135,189,	0,876,33570,80487,85934,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	75505229	75511200	chr5:75505229-75511200	0	-	75505229	75505229	8553170	2	887,89,	0,5882,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr5	75511755	75601144	chr5:75511755-75601144	3	+	75547022	75598018	0	15	159,148,120,153,132,154,240,125,167,33,97,172,957,43,3211,	0,35254,40716,57584,61982,65024,69453,71537,73004,75270,78588,82122,84466,85991,86178,
#Partially deleted in new
chr5	75511844	75598040	chr5:75511844-75598040	0	+	75552534	75593998	789624	14	70,120,153,132,154,240,125,167,33,97,84,957,43,107,	0,40627,57495,61893,64935,69364,71448,72915,75181,78499,82121,84377,85902,86089,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr5	75511890	75599102	chr5:75511890-75599102	0	+	75511890	75511890	8553170	16	24,148,120,153,132,154,240,86,125,167,33,97,172,957,43,1169,	0,35119,40581,57449,61847,64889,69318,70147,71402,72869,75135,78453,81987,84331,85856,86043,
#Partially deleted in new
chr5	75511890	75598167	chr5:75511890-75598167	0	+	75569354	75593998	0	15	24,120,114,153,132,154,240,125,167,33,97,84,957,43,234,	0,40581,56786,57449,61847,64889,69318,71402,72869,75135,78453,82075,84331,85856,86043,
#Partially deleted in new
chr5	75512064	75569369	chr5:75512064-75569369	0	+	75547022	75568694	789624	5	153,148,120,114,30,	0,34945,40407,56612,57275,
#Deleted in new
chr5	75538597	75538658	chr5:75538597-75538658	3	-	75538597	75538597	8553170	1	61,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	75547009	75582965	chr5:75547009-75582965	0	+	75547009	75547009	8553170	6	148,120,153,132,154,1757,	0,5462,22330,26728,29770,34199,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	75547009	75599834	chr5:75547009-75599834	0	+	75547022	75593902	789624	13	148,120,153,132,154,240,125,167,33,172,957,43,1901,	0,5462,22330,26728,29770,34199,36283,37750,40016,46868,49212,50737,50924,
#Partially deleted in new
chr5	75547009	75590509	chr5:75547009-75590509	1	+	75547022	75590503	0	10	148,120,153,132,154,240,125,167,33,166,	0,5462,22330,26728,29770,34199,36283,37750,40016,43334,
#Partially deleted in new
chr5	75547022	75598018	chr5:75547022-75598018	1	+	75547022	75597776	0	12	135,120,153,132,154,240,125,167,33,97,43,85,	0,5449,22317,26715,29757,34186,36270,37737,40003,43321,50724,50911,
#Partially deleted in new
chr5	75547022	75598018	chr5:75547022-75598018	0	+	75547022	75568694	789624	15	135,120,114,153,132,154,240,125,167,33,97,172,957,43,85,	0,5449,21654,22317,26715,29757,34186,36270,37737,40003,43321,46855,49199,50724,50911,
#Partially deleted in new
chr5	75547022	75598018	chr5:75547022-75598018	1	+	75547022	75598018	0	9	135,120,153,132,154,240,957,43,85,	0,5449,22317,26715,29757,34186,49199,50724,50911,
#Partially deleted in new
chr5	75547022	75598018	chr5:75547022-75598018	0	+	75547022	75596335	0	13	135,120,153,132,154,240,125,167,33,97,957,43,85,	0,5449,22317,26715,29757,34186,36270,37737,40003,43321,49199,50724,50911,
#Partially deleted in new
chr5	75547022	75598014	chr5:75547022-75598014	0	+	75547022	75568694	789624	13	135,120,114,153,132,154,240,125,167,33,97,43,81,	0,5449,21654,22317,26715,29757,34186,36270,37737,40003,43321,50724,50911,
#Partially deleted in new
chr5	75552470	75576917	chr5:75552470-75576917	0	+	75552470	75552470	8553170	5	121,85,153,132,138,	0,16235,16869,21267,24309,
#Deleted in new
chr5	75597113	75598040	chr5:75597113-75598040	0	+	75597113	75597113	8553170	2	65,294,	0,633,
#Deleted in new
chr5	75597416	75597988	chr5:75597416-75597988	0	+	75597416	75597416	8553170	2	373,55,	0,517,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	75598481	75599380	chr5:75598481-75599380	3	-	75598481	75598481	8553170	2	500,254,	0,645,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	75608816	75609983	chr5:75608816-75609983	3	+	75608816	75608816	8553170	1	1167,	0,
#Partially deleted in new
chr5	75611458	75671846	chr5:75611458-75671846	3	+	75611634	75671040	789624	14	369,104,99,99,105,99,99,99,99,99,96,202,132,868,	0,5345,8856,14188,14392,23439,24325,41683,44570,47824,51935,55333,57793,59520,
#Partially deleted in new
chr5	75611475	75671846	chr5:75611475-75671846	0	+	75611475	75611475	8553170	7	352,99,99,99,96,202,868,	0,41666,44553,47807,51918,55316,59503,
#Partially deleted in new
chr5	75634651	75663411	chr5:75634651-75663411	0	+	75634651	75634651	8553170	6	345,99,99,99,99,18,	0,1132,18490,21377,24631,28742,
#Partially deleted in new
chr5	75635311	75659304	chr5:75635311-75659304	0	+	75635311	75635311	8553170	4	571,99,99,22,	0,17830,20717,23971,
#Partially deleted in new
chr5	75674123	75717481	chr5:75674123-75717481	3	-	75674434	75712937	789624	12	455,177,278,154,180,105,177,206,84,139,98,176,	0,3650,11083,14888,16259,18272,20531,28481,31580,33613,38730,43182,
#Partially deleted in new
chr5	75674201	75717398	chr5:75674201-75717398	1	-	75674434	75712937	789624	11	377,177,278,154,180,105,177,206,139,98,93,	0,3572,11005,14810,16181,18194,20453,28403,33535,38652,43104,
#Partially deleted in new
chr5	75674430	75712455	chr5:75674430-75712455	1	-	75674434	75712384	789624	11	148,177,278,154,180,105,177,206,84,139,80,	0,3343,10776,14581,15952,17965,20224,28174,31273,33306,37945,
#Partially deleted in new
chr5	75674430	75712432	chr5:75674430-75712432	1	-	75674434	75702766	789624	10	148,278,154,180,105,177,206,84,139,53,	0,10776,14581,15952,17965,20224,28174,31273,33306,37949,
#Partially deleted in new
chr5	75677520	75685368	chr5:75677520-75685368	0	-	75677520	75677520	8553170	2	430,162,	0,7686,
#Partially deleted in new
chr5	75690520	75717448	chr5:75690520-75717448	0	-	75690520	75702766	789624	7	42,105,177,206,84,139,143,	0,1875,4134,12084,15183,17216,26785,
#Partially deleted in new
chr5	75694658	75712425	chr5:75694658-75712425	0	-	75694658	75694658	8553170	5	173,228,84,139,68,	0,7946,11045,13078,17699,
#Partially deleted in new
chr5	75694751	75717424	chr5:75694751-75717424	0	-	75707841	75712937	789624	7	80,206,84,139,59,98,119,	0,7853,10952,12985,17855,18102,22554,
#Partially deleted in new
chr5	75702614	75717426	chr5:75702614-75717426	0	-	75702614	75702766	789624	3	196,84,121,	0,3089,14691,
#Partially deleted in new
chr5	75702669	75717425	chr5:75702669-75717425	0	-	75702669	75702766	789624	4	141,84,98,120,	0,3034,10184,14636,
#Partially deleted in new
chr5	75705238	75717435	chr5:75705238-75717435	0	-	75705238	75705238	8553170	5	549,139,59,98,130,	0,2498,7368,7615,12067,
#Partially deleted in new
chr5	75705572	75717430	chr5:75705572-75717430	0	-	75705572	75705572	8553170	4	215,139,98,125,	0,2164,7281,11733,
#Partially deleted in new
chr5	75707483	75717344	chr5:75707483-75717344	0	-	75707483	75707483	8553170	4	392,59,98,39,	0,5123,5370,9822,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	75709494	75709599	chr5:75709494-75709599	3	-	75709494	75709494	8553170	1	105,	0,
#Deleted in new
chr5	75752569	75753479	chr5:75752569-75753479	7	-	75752569	75752569	16724991	1	910,	0,
#Partially deleted in new
chr5	75831254	75832764	chr5:75831254-75832764	7	-	75831254	75831254	16724991	1	1510,	0,
#Partially deleted in new
chr5	75910282	75910576	chr5:75910282-75910576	7	-	75910282	75910282	16724991	1	294,	0,
#Partially deleted in new
chr5	75910564	75911867	chr5:75910564-75911867	7	+	75910564	75910564	16724991	1	1303,	0,
#Partially deleted in new
chr5	75920669	75921660	chr5:75920669-75921660	7	-	75920669	75920669	16724991	1	991,	0,
#Deleted in new
chr5	76075530	76075920	chr5:76075530-76075920	7	+	76075530	76075530	16724991	1	390,	0,
#Deleted in new
chr5	76078665	76079763	chr5:76078665-76079763	7	+	76078665	76078665	16724991	1	1098,	0,
#Deleted in new
chr5	76081945	76084186	chr5:76081945-76084186	3	-	76081945	76081945	8553170	2	451,240,	0,2001,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	76083171	76333956	chr5:76083171-76333956	3	+	76131750	76325547	0	13	341,681,181,152,134,90,111,89,165,134,204,160,8593,	0,48478,111747,126564,201990,202609,208049,208596,212606,215622,217557,218214,242192,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	76083413	76353939	chr5:76083413-76353939	1	+	76131750	76353160	789624	13	99,681,181,152,134,90,111,89,165,134,204,160,810,	0,48236,111505,126322,201748,202367,207807,208354,212364,215380,217315,217972,269716,
#Deleted in new
chr5	76091707	76091801	chr5:76091707-76091801	7	-	76091707	76091707	16724991	1	94,	0,
#Deleted in new
chr5	76170929	76171106	chr5:76170929-76171106	7	+	76170929	76170929	16724991	1	177,	0,
#Deleted in new
chr5	76173628	76174183	chr5:76173628-76174183	7	-	76173628	76173628	16724991	1	555,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	76242023	76242404	chr5:76242023-76242404	7	-	76242023	76242023	16724991	1	381,	0,
#Deleted in new
chr5	76280955	76281267	chr5:76280955-76281267	7	+	76280955	76280955	16724991	1	312,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	76285541	76311462	chr5:76285541-76311462	3	-	76285541	76285541	8553170	3	380,97,279,	0,1165,25642,
#Partially deleted in new
chr5	76291764	76296122	chr5:76291764-76296122	0	+	76291764	76291764	8553170	2	92,345,	0,4013,
#Deleted in new
chr5	76376674	76377149	chr5:76376674-76377149	7	+	76376674	76376674	16724991	1	475,	0,
#Partially deleted in new
chr5	76403248	76708132	chr5:76403248-76708132	3	+	76403545	76707313	0	36	343,100,157,78,77,68,114,179,88,164,161,125,164,91,168,143,171,84,72,70,209,150,164,225,141,85,233,133,103,142,88,213,161,138,109,933,	0,58321,159147,167331,172444,185657,186366,187159,189589,194190,197563,202930,207771,224161,228610,233785,237684,249501,250951,251685,255210,261777,265432,268510,270200,270703,271228,273969,279866,280527,290106,292205,294738,297827,299233,303951,
#Partially deleted in new
chr5	76404423	76665051	chr5:76404423-76665051	0	+	76461604	76665051	789624	22	108,100,157,78,77,68,114,179,88,164,161,125,164,91,168,143,171,84,72,70,209,26,	0,57146,157972,166156,171269,184482,185191,185984,188414,193015,196388,201755,206596,222986,227435,232610,236509,248326,249776,250510,254035,260602,
#Partially deleted in new
chr5	76510439	76510766	chr5:76510439-76510766	7	+	76510439	76510439	16724991	1	327,	0,
#Partially deleted in new
chr5	76547408	76708130	chr5:76547408-76708130	1	+	76562399	76707313	789624	35	43,157,78,77,68,114,179,88,164,161,125,164,91,168,143,171,84,72,70,209,150,164,225,141,85,233,133,103,142,88,213,161,138,109,931,	0,14987,23171,28284,41497,42206,42999,45429,50030,53403,58770,63611,80001,84450,89625,93524,105341,106791,107525,111050,117617,121272,124350,126040,126543,127068,129809,135706,136367,145946,148045,150578,153667,155073,159791,
#Partially deleted in new
chr5	76547408	76698138	chr5:76547408-76698138	0	+	76562399	76698138	789624	32	43,157,78,77,68,114,179,88,164,161,125,164,91,168,143,171,84,72,70,209,150,164,225,141,85,233,133,103,142,88,213,152,	0,14987,23171,28284,41497,42206,42999,45429,50030,53403,58770,63611,80001,84450,89625,93524,105341,106791,107525,111050,117617,121272,124350,126040,126543,127068,129809,135706,136367,145946,148045,150578,
#Partially deleted in new
chr5	76597073	76600878	chr5:76597073-76600878	0	+	76597073	76597073	8553170	2	529,67,	0,3738,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	76606607	76608970	chr5:76606607-76608970	3	-	76606607	76606607	789624	2	1477,111,	0,2252,
#Partially deleted in new
chr5	76609094	76707404	chr5:76609094-76707404	1	+	76609163	76707313	0	24	85,164,91,168,143,84,72,70,209,150,164,225,141,85,233,133,103,142,88,213,161,138,109,205,	0,1925,18315,22764,27939,43655,45105,45839,49364,55931,59586,62664,64354,64857,65382,68123,74020,74681,84260,86359,88892,91981,93387,98105,
#Partially deleted in new
chr5	76609094	76671784	chr5:76609094-76671784	0	+	76609214	76671784	789624	13	136,164,91,168,143,171,84,72,70,209,150,164,26,	0,1925,18315,22764,27939,31838,43655,45105,45839,49364,55931,59586,62664,
#Partially deleted in new
chr5	76609118	76637104	chr5:76609118-76637104	0	+	76609214	76637104	789624	5	112,164,91,168,64,	0,1901,18291,22740,27922,
#Partially deleted in new
chr5	76609124	76707411	chr5:76609124-76707411	1	+	76609214	76707313	0	24	106,164,91,168,143,84,72,70,209,150,164,225,141,85,233,133,103,142,88,213,161,138,109,212,	0,1895,18285,22734,27909,43625,45075,45809,49334,55901,59556,62634,64324,64827,65352,68093,73990,74651,84230,86329,88862,91951,93357,98075,
#Partially deleted in new
chr5	76609137	76627496	chr5:76609137-76627496	0	+	76609163	76618516	789624	5	42,164,87,182,87,	0,1882,9376,15166,18272,
#Partially deleted in new
chr5	76609137	76632001	chr5:76609137-76632001	0	+	76609214	76628746	789624	5	93,164,91,68,143,	0,1882,18272,19547,22721,
#Partially deleted in new
chr5	76609137	76637108	chr5:76609137-76637108	0	+	76609137	76609137	8553170	4	93,91,168,75,	0,18272,22721,27896,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	76615481	76623434	chr5:76615481-76623434	3	-	76617581	76623230	789624	2	3161,268,	0,7685,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	76617372	76623413	chr5:76617372-76623413	1	-	76617581	76618640	789624	2	1270,117,	0,5924,
#Partially deleted in new
chr5	76654968	76660325	chr5:76654968-76660325	0	+	76654968	76654968	8553170	3	35,209,298,	0,3490,5059,
#Partially deleted in new
chr5	76668757	76673973	chr5:76668757-76673973	0	+	76668757	76668757	8553170	4	87,225,141,123,	0,3001,4691,5093,
#Partially deleted in new
chr5	76671869	76673781	chr5:76671869-76673781	0	+	76671869	76671869	8553170	2	114,333,	0,1579,
#Partially deleted in new
chr5	76674521	76708096	chr5:76674521-76708096	0	+	76674521	76683166	789624	9	188,103,142,88,213,161,138,109,897,	0,8593,9254,18833,20932,23465,26554,27960,32678,
#Partially deleted in new
chr5	76674640	76677542	chr5:76674640-76677542	0	+	76674640	76674640	8553170	2	69,325,	0,2577,
#Partially deleted in new
chr5	76677153	76695506	chr5:76677153-76695506	0	+	76677153	76677153	8553170	5	197,103,142,88,53,	0,5961,6622,16201,18300,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	76691438	76716215	chr5:76691438-76716215	3	-	76691438	76691438	8553170	4	275,145,141,39,	0,2391,7917,24738,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	76701706	76707624	chr5:76701706-76707624	0	+	76701706	76701706	8553170	3	224,109,425,	0,775,5493,
#Deleted in new
chr5	76712194	76712327	chr5:76712194-76712327	3	+	76712194	76712194	8553170	1	133,	0,
#Deleted in new
chr5	76712762	76712861	chr5:76712762-76712861	3	+	76712762	76712762	8553170	1	99,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	76716042	76735781	chr5:76716042-76735781	3	+	76716307	76733503	0	2	353,3468,	0,16271,
#Deleted in new
chr5	76716198	76716788	chr5:76716198-76716788	1	+	76716307	76716764	789624	2	197,245,	0,345,
#Partially deleted in new
chr5	76818932	76833227	chr5:76818932-76833227	0	+	76832889	76833227	789624	2	69,538,	0,13757,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	76818976	76835315	chr5:76818976-76835315	3	+	76819182	76833801	789624	2	288,2626,	0,13713,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	76836899	76837195	chr5:76836899-76837195	3	-	76836899	76836899	8553170	1	296,	0,
#Partially deleted in new
chr5	76875300	76921026	chr5:76875300-76921026	1	+	76875359	76877832	0	3	200,161,310,	0,2373,45416,
#Deleted in new
chr5	76948790	76948870	chr5:76948790-76948870	3	+	76948790	76948790	8553170	1	80,	0,
#Partially deleted in new
chr5	76952712	76969474	chr5:76952712-76969474	3	+	76953134	76968885	789624	7	503,94,158,211,149,118,747,	0,888,1316,2940,6028,10630,16015,
#Partially deleted in new
chr5	76953048	76959022	chr5:76953048-76959022	1	+	76953134	76958913	789624	5	167,94,158,211,282,	0,552,980,2604,5692,
#Partially deleted in new
chr5	76953416	76958844	chr5:76953416-76958844	0	+	76953416	76953416	8553170	4	278,158,211,104,	0,612,2236,5324,
#Partially deleted in new
chr5	76958696	76981158	chr5:76958696-76981158	0	+	76958696	76958696	8553170	4	193,118,156,198,	0,4646,17668,22264,
#Partially deleted in new
chr5	76963234	76968956	chr5:76963234-76968956	0	+	76963234	76963234	8553170	2	226,229,	0,5493,
#Partially deleted in new
chr5	77030384	77065234	chr5:77030384-77065234	3	+	77030766	77063252	789624	14	592,103,203,165,189,331,112,52,102,166,83,128,100,2183,	0,4033,5156,6171,9146,15962,17776,18551,22321,23580,25129,29231,31318,32667,
#Partially deleted in new
chr5	77030409	77039686	chr5:77030409-77039686	0	+	77030409	77034481	789624	5	198,103,203,165,156,	0,4008,5131,6146,9121,
#Partially deleted in new
chr5	77030455	77036058	chr5:77030455-77036058	1	+	77030766	77035758	789624	3	521,103,518,	0,3962,5085,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr5	77030901	77152155	chr5:77030901-77152155	3	+	77030901	77118436	789624	16	75,103,203,165,189,331,112,52,102,166,83,128,100,202,73,264,	0,3516,4639,5654,8629,15445,17259,18034,21804,23063,24612,28714,30801,87418,120322,120990,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	77072071	77087323	chr5:77072071-77087323	3	-	77077173	77077878	789624	3	5824,135,213,	0,6522,15039,
#Deleted in new
chr5	77073880	77074520	chr5:77073880-77074520	3	+	77073880	77073880	8553170	2	357,28,	0,612,
#Partially deleted in new
chr5	77077426	77087183	chr5:77077426-77087183	0	-	77077426	77077878	789624	2	469,73,	0,9684,
#Partially deleted in new
chr5	77079040	77087200	chr5:77079040-77087200	0	-	77079040	77079040	8553170	2	342,90,	0,8070,
#Deleted in new
chr5	77080433	77080571	chr5:77080433-77080571	3	-	77080433	77080433	789624	1	138,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	77086687	77142164	chr5:77086687-77142164	0	+	77086687	77086687	8553170	5	217,133,58,202,2904,	0,799,2658,31632,52573,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	77086704	77142279	chr5:77086704-77142279	0	+	77086704	77086704	8553170	2	915,3019,	0,52556,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	77086710	77106243	chr5:77086710-77106243	0	+	77086710	77086710	8553170	5	194,133,93,156,588,	0,776,11944,13525,18945,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	77086710	77142064	chr5:77086710-77142064	0	+	77086710	77086710	8553170	6	194,133,93,156,202,2804,	0,776,11944,13525,31609,52550,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	77086714	77119644	chr5:77086714-77119644	0	+	77086714	77086714	8553170	4	190,133,93,1325,	0,772,11940,31605,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	77086731	77142094	chr5:77086731-77142094	0	+	77086731	77086731	8553170	4	173,133,202,2829,	0,755,31588,52534,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	77086731	77142143	chr5:77086731-77142143	3	+	77086731	77086731	8553170	7	173,133,93,156,34,202,2883,	0,755,11923,13504,18924,31588,52529,
#Partially deleted in new
chr5	77086731	77427124	chr5:77086731-77427124	3	+	77312026	77426554	789624	24	173,133,202,60,191,60,58,89,79,141,89,61,43,78,77,165,46,136,199,218,121,168,130,680,	0,755,31588,225262,238807,242266,244670,250495,258121,262687,264333,266614,313516,317988,320649,322161,324944,325368,326379,331497,333035,335089,339035,339713,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	77086735	77142217	chr5:77086735-77142217	0	+	77086735	77086735	8553170	4	169,133,202,2957,	0,751,31584,52525,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	77086739	77148524	chr5:77086739-77148524	0	+	77086739	77086739	789624	4	165,133,202,873,	0,747,31580,60912,
#Duplicated in new
chr5	77086766	77087916	chr5:77086766-77087916	0	+	77086766	77086766	8553170	2	138,430,	0,720,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	77086766	77139511	chr5:77086766-77139511	0	+	77086766	77086766	8553170	7	138,133,58,93,202,281,251,	0,720,2579,11888,31553,47538,52494,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	77086766	77139688	chr5:77086766-77139688	0	+	77086766	77086766	8553170	5	138,133,93,202,428,	0,720,11888,31553,52494,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	77086797	77147745	chr5:77086797-77147745	0	+	77086797	77086797	8553170	5	107,133,34,202,94,	0,689,18858,31522,60854,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	77086800	77139303	chr5:77086800-77139303	0	+	77086800	77086800	8553170	6	104,133,93,34,202,43,	0,686,11854,18855,31519,52460,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	77086800	77105808	chr5:77086800-77105808	0	+	77086800	77086800	8553170	6	104,133,42,93,156,153,	0,686,5691,11854,13435,18855,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	77086840	77139694	chr5:77086840-77139694	0	+	77086840	77086840	8553170	3	64,202,434,	0,31479,52420,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	77087001	77115334	chr5:77087001-77115334	1	+	77087001	77087001	8553170	5	618,58,15,34,3431,	0,2344,11653,18654,24902,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	77087001	77142079	chr5:77087001-77142079	0	+	77087001	77087001	8553170	4	618,32,202,2819,	0,1439,31318,52259,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	77087001	77141881	chr5:77087001-77141881	0	+	77087001	77087001	8553170	5	618,93,66,202,2621,	0,11653,13324,31318,52259,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	77087012	77142239	chr5:77087012-77142239	0	+	77087012	77087012	8553170	3	607,202,2979,	0,31307,52248,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	77087013	77148534	chr5:77087013-77148534	0	+	77087013	77087013	8553170	3	606,202,883,	0,31306,60638,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	77087020	77142022	chr5:77087020-77142022	0	+	77087020	77087020	8553170	3	283,133,2762,	0,466,52240,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	77087112	77148261	chr5:77087112-77148261	0	+	77087112	77087112	8553170	4	191,133,202,610,	0,374,31207,60539,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	77087436	77105392	chr5:77087436-77105392	0	+	77087436	77087436	8553170	4	183,93,156,868,	0,11218,12799,17088,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	77087462	77151391	chr5:77087462-77151391	0	+	77087462	77087462	8553170	3	157,202,168,	0,30857,63761,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	77087486	77148108	chr5:77087486-77148108	0	+	77087486	77087486	8553170	5	133,93,156,202,457,	0,11168,12749,30833,60165,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	77087556	77148461	chr5:77087556-77148461	0	+	77087556	77087556	8553170	4	63,202,57,810,	0,30763,51704,60095,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	77088058	77148523	chr5:77088058-77148523	0	+	77088058	77088058	8553170	5	414,93,156,202,872,	0,10596,12177,30261,59593,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	77088058	77151386	chr5:77088058-77151386	0	+	77088058	77088058	8553170	5	414,93,156,202,163,	0,10596,12177,30261,63165,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	77088058	77148533	chr5:77088058-77148533	0	+	77088058	77088058	8553170	3	414,202,882,	0,30261,59593,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	77088404	77106234	chr5:77088404-77106234	0	+	77088404	77088404	8553170	4	68,93,156,1710,	0,10250,11831,16120,
#Partially deleted in new
chr5	77118319	77148110	chr5:77118319-77148110	0	+	77118319	77118319	8553170	3	202,52,459,	0,20946,29332,
#Partially deleted in new
chr5	77118321	77166909	chr5:77118321-77166909	0	+	77118321	77118321	8553170	3	200,140,242,	0,47039,48346,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	77139248	77148523	chr5:77139248-77148523	1	+	77139248	77139248	8553170	3	69,1046,872,	0,6868,8403,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	77143896	77151329	chr5:77143896-77151329	0	+	77143896	77143896	8553170	2	4190,106,	0,7327,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	77143896	77148338	chr5:77143896-77148338	0	+	77143896	77143896	8553170	2	3266,687,	0,3755,
#Deleted in new
chr5	77146567	77147165	chr5:77146567-77147165	7	+	77146567	77146567	16724991	1	598,	0,
#Partially deleted in new
chr5	77210448	77331473	chr5:77210448-77331473	0	+	77312026	77331473	789624	6	47,306,60,191,60,72,	0,510,101545,115090,118549,120953,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr5	77210880	77429807	chr5:77210880-77429807	3	+	77210925	77426554	789624	22	384,60,191,60,58,89,79,141,89,61,43,78,77,165,46,136,199,218,121,168,130,3363,	0,101113,114658,118117,120521,126346,133972,138538,140184,142465,189367,193839,196500,198012,200795,201219,202230,207348,208886,210940,214886,215564,
#Partially deleted in new
chr5	77210880	77427418	chr5:77210880-77427418	1	+	77210925	77426554	789624	21	384,60,191,60,58,89,79,89,61,43,78,77,165,46,136,199,218,121,168,130,974,	0,101113,114658,118117,120521,126346,133972,140184,142465,189367,193839,196500,198012,200795,201219,202230,207348,208886,210940,214886,215564,
#Partially deleted in new
chr5	77210880	77427418	chr5:77210880-77427418	1	+	77210925	77426554	789624	19	384,60,191,60,58,89,79,43,78,77,165,46,136,199,218,121,168,130,974,	0,101113,114658,118117,120521,126346,133972,189367,193839,196500,198012,200795,201219,202230,207348,208886,210940,214886,215564,
#Partially deleted in new
chr5	77210925	77426633	chr5:77210925-77426633	1	+	77210925	77426554	789624	21	339,60,191,60,58,89,79,141,89,61,43,78,77,46,136,199,218,121,168,130,189,	0,101068,114613,118072,120476,126301,133927,138493,140139,142420,189322,193794,196455,200750,201174,202185,207303,208841,210895,214841,215519,
#Partially deleted in new
chr5	77210925	77426633	chr5:77210925-77426633	1	+	77210925	77426554	789624	21	339,191,60,58,89,79,141,89,61,43,78,77,165,46,136,199,218,121,168,130,189,	0,114613,118072,120476,126301,133927,138493,140139,142420,189322,193794,196455,197967,200750,201174,202185,207303,208841,210895,214841,215519,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	77213943	77331459	chr5:77213943-77331459	0	+	77312026	77331459	789624	6	47,119,60,191,60,58,	0,32785,98050,111595,115054,117458,
#Deleted in new
chr5	77290267	77291800	chr5:77290267-77291800	7	+	77290267	77290267	16724991	1	1533,	0,
#Partially deleted in new
chr5	77325692	77351118	chr5:77325692-77351118	0	+	77337232	77351118	789624	7	37,60,114,89,79,141,54,	0,3305,5653,11534,19160,23726,25372,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	77410423	77428195	chr5:77410423-77428195	1	+	77412128	77426554	789624	9	705,46,136,199,218,121,168,130,1751,	0,1252,1676,2687,7805,9343,11397,15343,16021,
#Partially deleted in new
chr5	77425969	77432955	chr5:77425969-77432955	0	-	77425969	77425969	8553170	3	222,91,63,	0,974,6923,
#Partially deleted in new
chr5	77426651	77436279	chr5:77426651-77436279	0	-	77426651	77426651	8553170	3	383,395,19,	0,6241,9609,
#Partially deleted in new
chr5	77426653	77433159	chr5:77426653-77433159	0	-	77426653	77426653	8553170	2	381,75,	0,6431,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	77430932	77492596	chr5:77430932-77492596	3	-	77433134	77492220	789624	13	2355,134,89,122,185,111,63,112,63,132,49,116,427,	0,5328,6403,7307,9880,18827,20358,22884,28129,32162,33828,58524,61237,
#Partially deleted in new
chr5	77432243	77452873	chr5:77432243-77452873	0	-	77432243	77432243	8553170	7	1044,134,89,122,185,111,1583,	0,4017,5092,5996,8569,17516,19047,
#Partially deleted in new
chr5	77432812	77492199	chr5:77432812-77492199	0	-	77433134	77492199	789624	11	475,134,89,122,185,112,63,132,49,116,30,	0,3448,4523,5427,8000,21004,26249,30282,31948,56644,59357,
#Partially deleted in new
chr5	77432892	77492316	chr5:77432892-77492316	1	-	77433134	77492220	789624	11	395,134,89,122,185,111,63,112,63,132,147,	0,3368,4443,5347,7920,16867,18398,20924,26169,30202,59277,
#Partially deleted in new
chr5	77436359	77451353	chr5:77436359-77451353	0	-	77436384	77451353	789624	5	35,122,185,111,63,	0,1880,4453,13400,14931,
#Partially deleted in new
chr5	77436378	77492203	chr5:77436378-77492203	0	-	77436378	77489466	789624	6	16,89,122,185,116,34,	0,957,1861,4434,53078,55791,
#Partially deleted in new
chr5	77437406	77492220	chr5:77437406-77492220	0	-	77449852	77492220	789624	10	18,122,185,101,112,63,132,49,116,51,	0,833,3406,12353,16410,21655,25688,27354,52050,54763,
#Partially deleted in new
chr5	77438257	77492287	chr5:77438257-77492287	0	-	77438257	77492220	789624	4	104,185,22,118,	0,2555,51293,53912,
#Partially deleted in new
chr5	77440816	77492496	chr5:77440816-77492496	0	-	77451290	77492220	789624	8	181,111,63,63,132,49,116,327,	0,8943,10474,18245,22278,23944,48640,51353,
#Partially deleted in new
chr5	77440930	77492223	chr5:77440930-77492223	0	-	77449815	77492220	789624	7	67,101,63,132,49,116,54,	0,8829,18131,22164,23830,48526,51239,
#Partially deleted in new
chr5	77449764	77492215	chr5:77449764-77492215	0	-	77449764	77449764	8553170	8	106,56,112,63,132,49,116,46,	0,1526,4052,9297,13330,14996,39692,42405,
#Partially deleted in new
chr5	77449803	77492215	chr5:77449803-77492215	0	-	77463207	77492215	789624	7	67,63,112,75,132,116,46,	0,1487,4013,9246,13291,39653,42366,
#Partially deleted in new
chr5	77449814	77492221	chr5:77449814-77492221	0	-	77449814	77449814	8553170	7	46,127,63,132,49,116,52,	0,3987,9247,13280,14946,39642,42355,
#Partially deleted in new
chr5	77449830	77492220	chr5:77449830-77492220	0	-	77463207	77492220	789624	7	40,63,112,63,132,116,51,	0,1460,3986,9231,13264,39626,42339,
#Partially deleted in new
chr5	77451290	77492477	chr5:77451290-77492477	0	-	77489550	77492220	789624	7	63,112,63,132,49,116,319,	0,2526,7771,11804,13470,38166,40868,
#Partially deleted in new
chr5	77451290	77492222	chr5:77451290-77492222	0	-	77451290	77492220	789624	7	63,94,63,132,49,116,53,	0,2526,7771,11804,13470,38166,40879,
#Partially deleted in new
chr5	77451323	77492487	chr5:77451323-77492487	0	-	77451323	77492220	789624	7	30,112,63,132,49,101,318,	0,2493,7738,11771,13437,38133,40846,
#Duplicated in new
chr5	77453865	77491285	chr5:77453865-77491285	0	-	77453865	77491219	789624	6	63,63,132,49,116,93,	0,5196,9229,10895,35591,37327,
#Partially deleted in new
chr5	77453878	77620611	chr5:77453878-77620611	0	-	77453878	77620520	789624	6	50,63,132,49,116,133,	0,5183,9216,10882,35578,166600,
#Partially deleted in new
chr5	77458858	77492222	chr5:77458858-77492222	0	-	77458858	77458858	8553170	5	266,132,49,116,53,	0,4236,5902,30598,33311,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	77463092	77620576	chr5:77463092-77620576	0	-	77463092	77463092	8553170	5	134,49,101,79,98,	0,1668,26364,77365,157386,
#Partially deleted in new
chr5	77463105	77499636	chr5:77463105-77499636	0	-	77463105	77463105	8553170	4	121,49,116,310,	0,1655,26351,36221,
#Partially deleted in new
chr5	77463105	77492003	chr5:77463105-77492003	0	-	77463105	77463105	8553170	4	121,49,101,192,	0,1655,26351,28706,
#Partially deleted in new
chr5	77463123	77492507	chr5:77463123-77492507	0	-	77463123	77463123	8553170	5	103,49,116,26,255,	0,1637,26333,29046,29129,
#Partially deleted in new
chr5	77545396	77546266	chr5:77545396-77546266	7	+	77545396	77545396	16724991	1	870,	0,
#Deleted in new
chr5	77582375	77583122	chr5:77582375-77583122	7	+	77582375	77582375	16724991	1	747,	0,
#Partially deleted in new
chr5	77628711	77639688	chr5:77628711-77639688	3	-	77630263	77638549	789624	3	2083,410,1176,	0,8109,9801,
#Deleted in new
chr5	77635930	77636993	chr5:77635930-77636993	0	-	77635930	77635930	8553170	2	782,173,	0,890,
#Partially deleted in new
chr5	77691165	77776361	chr5:77691165-77776361	3	-	77691417	77776257	0	4	333,87,106,157,	0,2100,17076,85039,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	77691240	77776287	chr5:77691240-77776287	1	-	77693121	77776257	0	3	2112,106,83,	0,17001,84964,
#Partially deleted in new
chr5	77691240	77715317	chr5:77691240-77715317	1	-	77691417	77715309	789624	4	258,87,106,94,	0,2025,17001,23983,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	77691240	77708613	chr5:77691240-77708613	0	-	77691240	77691240	8553170	3	258,87,372,	0,2025,17001,
#Partially deleted in new
chr5	77691247	77776293	chr5:77691247-77776293	1	-	77691417	77776257	789624	3	251,106,89,	0,16994,84957,
#Partially deleted in new
chr5	77691258	77694277	chr5:77691258-77694277	0	-	77691258	77691258	8553170	3	240,87,32,	0,2007,2987,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	77691266	77776261	chr5:77691266-77776261	1	-	77691417	77776257	789624	5	232,87,69,106,57,	0,1999,14299,16975,84938,
#Partially deleted in new
chr5	77691403	77868780	chr5:77691403-77868780	1	-	77691417	77708328	789624	4	95,87,106,147,	0,1862,16838,177230,
#Partially deleted in new
chr5	77693265	77776274	chr5:77693265-77776274	1	-	77693324	77776257	789624	2	87,70,	0,82939,
#Deleted in new
chr5	77784880	77786003	chr5:77784880-77786003	7	+	77784880	77784880	16724991	1	1123,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	77942756	77946438	chr5:77942756-77946438	3	-	77942756	77942756	8553170	2	79,643,	0,3039,
#Partially deleted in new
chr5	78000524	78294755	chr5:78000524-78294755	3	-	78002901	78294579	789624	27	2531,139,98,85,232,107,73,148,172,109,131,187,177,110,133,63,72,55,98,156,183,67,161,96,75,76,304,	0,14885,20167,33836,38518,88868,100428,109682,113227,115601,127505,128596,140618,155733,162294,165085,175101,175259,176814,180982,215530,225017,226847,227619,240337,266995,293927,
#Partially deleted in new
chr5	78002325	78294692	chr5:78002325-78294692	1	-	78002901	78267576	789624	27	730,139,98,85,232,107,73,148,172,109,131,187,177,110,133,63,72,55,98,156,183,67,161,96,75,76,253,	0,13084,18366,32035,36717,87067,98627,107881,111426,113800,125704,126795,138817,153932,160493,163284,173300,173458,175013,179181,213729,223216,225046,225818,238536,265194,292114,
#Partially deleted in new
chr5	78002337	78039150	chr5:78002337-78039150	0	-	78003043	78039150	789624	5	740,139,98,85,108,	0,13072,18354,32023,36705,
#Partially deleted in new
chr5	78002994	78015873	chr5:78002994-78015873	0	-	78002994	78002994	8553170	2	61,464,	0,12415,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	78020707	78043250	chr5:78020707-78043250	0	-	78020707	78020707	8553170	4	82,85,232,377,	0,13653,18335,22166,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	78041878	78044138	chr5:78041878-78044138	7	-	78041878	78041878	16724991	1	2260,	0,
#Partially deleted in new
chr5	78087495	78113770	chr5:78087495-78113770	0	-	78087495	78087495	8553170	5	172,107,73,148,19,	0,1897,13457,22711,26256,
#Partially deleted in new
chr5	78088980	78116187	chr5:78088980-78116187	0	-	78088980	78088980	8553170	5	519,73,148,172,62,	0,11972,21226,24771,27145,
#Deleted in new
chr5	78222183	78222517	chr5:78222183-78222517	7	+	78222183	78222183	16724991	1	334,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	78307502	78307914	chr5:78307502-78307914	7	+	78307502	78307502	16724991	1	412,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	78314915	78315025	chr5:78314915-78315025	3	-	78314915	78314915	8553170	1	110,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	78317035	78317137	chr5:78317035-78317137	3	+	78317035	78317035	8553170	1	102,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	78342364	78360393	chr5:78342364-78360393	3	-	78342364	78342364	8553170	3	236,77,180,	0,504,17849,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	78358800	78360507	chr5:78358800-78360507	1	-	78358800	78358800	789624	2	1185,294,	0,1413,
#Partially deleted in new
chr5	78360582	78479071	chr5:78360582-78479071	3	+	78360671	78475668	789624	9	146,78,99,109,129,160,102,118,3568,	0,28254,54937,55958,58192,61218,89350,98662,114921,
#Partially deleted in new
chr5	78360610	78476026	chr5:78360610-78476026	0	+	78360671	78449934	789624	8	118,78,99,109,129,102,118,523,	0,28226,54909,55930,58164,89322,98634,114893,
#Partially deleted in new
chr5	78360610	78476026	chr5:78360610-78476026	1	+	78360671	78475668	789624	8	118,99,109,129,160,102,118,523,	0,54909,55930,58164,61190,89322,98634,114893,
#Partially deleted in new
chr5	78360627	78416635	chr5:78360627-78416635	0	+	78370718	78416635	789624	5	101,186,78,99,95,	0,9992,28209,54892,55913,
#Partially deleted in new
chr5	78360804	78416588	chr5:78360804-78416588	0	+	78415540	78416588	789624	4	252,78,99,48,	0,28032,54715,55736,
#Partially deleted in new
chr5	78416602	78478815	chr5:78416602-78478815	0	+	78416602	78475668	789624	5	47,129,160,118,3312,	0,2172,5198,42642,58901,
#Partially deleted in new
chr5	78485214	78549151	chr5:78485214-78549151	1	-	78488896	78510213	789624	3	3939,615,126,	0,24569,63811,
#Partially deleted in new
chr5	78485216	78648825	chr5:78485216-78648825	3	-	78488896	78510213	789624	5	3937,615,59,105,327,	0,24567,79596,147047,163282,
#Partially deleted in new
chr5	78488811	78491306	chr5:78488811-78491306	0	-	78488811	78488811	8553170	2	342,228,	0,2267,
#Partially deleted in new
chr5	78509999	78648617	chr5:78509999-78648617	0	-	78509999	78509999	8553170	3	399,59,119,	0,54813,138499,
#Partially deleted in new
chr5	78510026	78648895	chr5:78510026-78648895	0	-	78510026	78510026	8553170	4	372,59,105,397,	0,54786,122237,138472,
#Partially deleted in new
chr5	78510038	78590192	chr5:78510038-78590192	0	-	78510038	78510038	8553170	3	360,59,115,	0,54774,80039,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	78624816	78642162	chr5:78624816-78642162	0	-	78624816	78624816	8553170	3	1835,105,153,	0,7447,17193,
#Partially deleted in new
chr5	78632259	78770021	chr5:78632259-78770021	0	-	78632259	78632259	8553170	4	109,107,211,83,	0,134498,135582,137679,
#Deleted in new
chr5	78644264	78644845	chr5:78644264-78644845	7	-	78644264	78644264	16724991	1	581,	0,
#Partially deleted in new
chr5	78708733	78716082	chr5:78708733-78716082	7	-	78708733	78708733	16724991	3	410,319,62,	0,705,7287,
#Deleted in new
chr5	78753595	78753873	chr5:78753595-78753873	7	+	78753595	78753595	16724991	1	278,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	78777208	78985787	chr5:78777208-78985787	3	-	78780396	78985248	0	8	3454,123,71,244,208,191,187,851,	0,4643,62147,108375,178086,187207,191797,207728,
#Deleted in new
chr5	78780351	78783494	chr5:78780351-78783494	0	-	78780351	78780351	8553170	3	311,123,178,	0,1500,2965,
#Partially deleted in new
chr5	78815510	78986087	chr5:78815510-78986087	1	-	78816085	78985248	0	8	604,71,244,208,191,187,622,189,	0,23845,70073,139784,148905,153495,169426,170388,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	78882881	78985249	chr5:78882881-78985249	1	-	78885528	78985248	789624	5	2946,208,191,187,313,	0,72413,81534,86124,102055,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	78884293	78955374	chr5:78884293-78955374	0	-	78884293	78884293	8553170	3	835,244,80,	0,1290,71001,
#Deleted in new
chr5	78985111	78985838	chr5:78985111-78985838	0	-	78985111	78985248	789624	2	447,126,	0,601,
#Partially deleted in new
chr5	78997605	79069649	chr5:78997605-79069649	3	-	78998081	79069620	0	16	692,135,60,158,218,131,166,154,170,199,249,205,165,99,175,130,	0,7667,26665,28818,30827,32298,33227,35081,35633,44677,46698,53681,56578,58204,66007,71914,
#Deleted in new
chr5	79000111	79001124	chr5:79000111-79001124	7	-	79000111	79000111	16724991	1	1013,	0,
#Partially deleted in new
chr5	79020671	79054240	chr5:79020671-79054240	0	-	79021606	79054240	789624	12	1010,60,158,218,131,166,154,170,199,249,205,57,	0,3599,5752,7761,9232,10161,12015,12567,21611,23632,30615,33512,
#Partially deleted in new
chr5	79021505	79069629	chr5:79021505-79069629	0	-	79044531	79069620	789624	12	176,60,158,218,131,166,154,170,199,249,175,110,	0,2765,4918,6927,8398,9327,11181,11733,20777,22798,42107,48014,
#Partially deleted in new
chr5	79021506	79069629	chr5:79021506-79069629	0	-	79033363	79069620	789624	10	175,60,158,218,131,166,154,170,175,110,	0,2764,4917,6926,8397,9326,11180,11732,42106,48013,
#Partially deleted in new
chr5	79042426	79069674	chr5:79042426-79069674	0	-	79055852	79069620	789624	4	55,249,95,155,	0,1877,13383,27093,
#Partially deleted in new
chr5	79051286	79069626	chr5:79051286-79069626	0	-	79055852	79069620	789624	4	205,165,95,107,	0,2897,4523,18233,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	79055853	79236038	chr5:79055853-79236038	0	-	79055853	79055853	8553170	5	55,115,113,150,228,	0,48310,64487,65349,179957,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	79069716	79089466	chr5:79069716-79089466	3	+	79069782	79088574	789624	8	99,133,92,192,148,183,229,974,	0,7763,9652,10970,13092,13475,13911,18776,
#Partially deleted in new
chr5	79069766	79080813	chr5:79069766-79080813	0	+	79079382	79080813	789624	5	49,123,133,92,127,	0,1326,7713,9602,10920,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	79069766	79089195	chr5:79069766-79089195	1	+	79069782	79088574	789624	7	49,133,92,148,183,229,703,	0,7713,9602,13042,13425,13861,18726,
#Partially deleted in new
chr5	79069767	79080941	chr5:79069767-79080941	0	+	79069767	79069767	8553170	4	48,133,92,255,	0,7712,9601,10919,
#Partially deleted in new
chr5	79069768	79083219	chr5:79069768-79083219	0	+	79069782	79079441	789624	7	47,46,25,92,192,148,28,	0,7711,7819,9600,10918,13040,13423,
#Partially deleted in new
chr5	79069775	79078141	chr5:79069775-79078141	0	+	79069775	79069775	8553170	2	40,662,	0,7704,
#Deleted in new
chr5	79082391	79083198	chr5:79082391-79083198	0	+	79082391	79082391	8553170	2	565,7,	0,800,
#Partially deleted in new
chr5	79111778	79132290	chr5:79111778-79132290	3	+	79111885	79131116	0	8	140,133,119,192,148,183,229,1358,	0,3988,7480,8571,9439,14267,15976,19154,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	79111808	79116404	chr5:79111808-79116404	0	+	79111808	79111808	8553170	2	110,638,	0,3958,
#Partially deleted in new
chr5	79111808	79119606	chr5:79111808-79119606	0	+	79111808	79111808	8553170	3	110,133,348,	0,3958,7450,
#Partially deleted in new
chr5	79111808	79131484	chr5:79111808-79131484	1	+	79111885	79131116	789624	5	110,133,183,229,552,	0,3958,14237,15946,19124,
#Partially deleted in new
chr5	79120276	79235938	chr5:79120276-79235938	0	-	79120276	79120276	8553170	3	177,150,128,	0,926,115534,
#Partially deleted in new
chr5	79120351	79126297	chr5:79120351-79126297	0	+	79120351	79120351	8553170	3	190,148,252,	0,866,5694,
#Partially deleted in new
chr5	79121280	79128197	chr5:79121280-79128197	0	+	79121280	79121280	8553170	3	85,183,443,	0,4765,6474,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	79170233	79170335	chr5:79170233-79170335	3	-	79170233	79170233	8553170	1	102,	0,
#Deleted in new
chr5	79191548	79191747	chr5:79191548-79191747	7	+	79191548	79191548	16724991	1	199,	0,
#Partially deleted in new
chr5	79220941	79221073	chr5:79220941-79221073	3	+	79220941	79220941	8553170	1	132,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	79222145	79236005	chr5:79222145-79236005	0	-	79222145	79222145	8553170	3	236,119,195,	0,1662,13665,
#Partially deleted in new
chr5	79229903	79230588	chr5:79229903-79230588	7	+	79229903	79229903	16724991	2	265,94,	0,591,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	79236188	79327215	chr5:79236188-79327215	3	+	79236650	79316307	789624	11	1494,174,151,170,166,188,87,96,595,311,5610,	0,41721,53932,54941,63964,64487,70186,76214,78068,79811,85417,
#Deleted in new
chr5	79284131	79284918	chr5:79284131-79284918	7	-	79284131	79284131	16724991	1	787,	0,
#Partially deleted in new
chr5	79300242	79325197	chr5:79300242-79325197	0	+	79300242	79300242	8553170	2	76,333,	0,24622,
#Partially deleted in new
chr5	79372635	79514217	chr5:79372635-79514217	3	-	79376008	79512774	789624	9	3562,81,111,157,140,93,132,157,1448,	0,24187,24891,29263,66374,74417,78354,84226,140134,
#Partially deleted in new
chr5	79375907	79397910	chr5:79375907-79397910	0	-	79375907	79375907	8553170	3	290,81,384,	0,20915,21619,
#Partially deleted in new
chr5	79375929	79512794	chr5:79375929-79512794	1	-	79376008	79512774	789624	6	268,81,111,132,157,25,	0,20893,21597,75060,80932,136840,
#Partially deleted in new
chr5	79375929	79512794	chr5:79375929-79512794	1	-	79376190	79512774	789624	6	268,140,93,132,157,25,	0,63080,71123,75060,80932,136840,
#Partially deleted in new
chr5	79375929	79512794	chr5:79375929-79512794	1	-	79376008	79512774	789624	5	268,81,111,157,25,	0,20893,21597,25969,136840,
#Deleted in new
chr5	79510433	79510919	chr5:79510433-79510919	7	+	79510433	79510433	16724991	1	486,	0,
#Deleted in new
chr5	79529301	79530093	chr5:79529301-79530093	7	+	79529301	79529301	16724991	1	792,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	79534852	79534954	chr5:79534852-79534954	3	+	79534852	79534852	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	79562744	79562846	chr5:79562744-79562846	3	-	79562744	79562744	8553170	1	102,	0,
#Partially deleted in new
chr5	79612119	79623648	chr5:79612119-79623648	0	+	79612119	79612119	8553170	5	55,65,174,90,397,	0,891,7492,7874,11132,
#Partially deleted in new
chr5	79612419	79686648	chr5:79612419-79686648	3	+	79619648	79685273	789624	15	656,174,90,238,115,92,79,70,77,129,44,137,92,80,1450,	0,7192,7574,10832,28431,28685,30412,32703,36197,36642,44538,56472,67159,69562,72779,
#Partially deleted in new
chr5	79612432	79686648	chr5:79612432-79686648	1	+	79619648	79685273	789624	16	303,65,174,90,238,115,92,67,70,77,129,44,137,92,80,1450,	0,578,7179,7561,10819,28418,28672,30411,32690,36184,36629,44525,56459,67146,69549,72766,
#Partially deleted in new
chr5	79612434	79686266	chr5:79612434-79686266	1	+	79619648	79685273	789624	14	641,174,90,238,115,92,79,70,77,44,137,92,80,1068,	0,7177,7559,10817,28416,28670,30397,32688,36182,44523,56457,67144,69547,72764,
#Partially deleted in new
chr5	79612484	79685580	chr5:79612484-79685580	1	+	79619648	79685273	789624	17	251,65,89,174,90,238,115,92,79,70,77,129,44,137,92,80,382,	0,526,2590,7127,7509,10767,28366,28620,30347,32638,36132,36577,44473,56407,67094,69497,72714,
#Partially deleted in new
chr5	79612502	79623309	chr5:79612502-79623309	0	+	79612502	79612502	8553170	5	189,65,174,90,58,	0,508,7109,7491,10749,
#Deleted in new
chr5	79612519	79614083	chr5:79612519-79614083	0	+	79612519	79612519	8553170	2	556,149,	0,1415,
#Partially deleted in new
chr5	79612572	79686648	chr5:79612572-79686648	1	+	79619648	79685273	789624	16	197,65,174,90,238,115,92,79,70,77,129,44,137,92,80,1450,	0,438,7039,7421,10679,28278,28532,30259,32550,36044,36489,44385,56319,67006,69409,72626,
#Partially deleted in new
chr5	79612574	79619764	chr5:79612574-79619764	0	+	79612574	79612574	8553170	4	195,65,70,153,	0,436,4955,7037,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	79612574	79620617	chr5:79612574-79620617	0	+	79612574	79612574	8553170	5	195,65,174,90,51,	0,436,7037,7419,7992,
#Partially deleted in new
chr5	79612617	79623316	chr5:79612617-79623316	0	+	79612617	79612617	8553170	6	118,65,70,174,90,65,	0,393,4912,6994,7376,10634,
#Partially deleted in new
chr5	79644645	79648651	chr5:79644645-79648651	0	+	79644645	79644645	8553170	2	547,35,	0,3971,
#Partially deleted in new
chr5	79648704	79669005	chr5:79648704-79669005	0	+	79648704	79648704	8553170	2	486,114,	0,20187,
#Partially deleted in new
chr5	79648861	79679668	chr5:79648861-79679668	0	+	79648861	79648861	8553170	4	329,44,137,90,	0,8096,20030,30717,
#Partially deleted in new
chr5	79656880	79685233	chr5:79656880-79685233	0	+	79656880	79656880	8553170	5	121,137,92,80,35,	0,12011,22698,25101,28318,
#Partially deleted in new
chr5	79668720	79685240	chr5:79668720-79685240	0	+	79668720	79668720	8553170	4	308,92,80,42,	0,10858,13261,16478,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	79681651	79685330	chr5:79681651-79685330	0	+	79681651	79681651	8553170	2	410,132,	0,3547,
#Partially deleted in new
chr5	79689876	79800222	chr5:79689876-79800222	3	+	79689907	79799616	789624	13	180,10489,96,234,23,119,150,147,148,134,100,174,853,	0,39038,53950,55345,57214,62799,68876,71934,73185,99094,101093,103560,109493,
#Partially deleted in new
chr5	79738141	79800240	chr5:79738141-79800240	0	+	79738141	79738141	8553170	11	1262,96,234,23,119,150,1399,134,100,174,871,	0,5685,7080,8949,14534,20611,23669,50829,52828,55295,61228,
#Partially deleted in new
chr5	79758752	79763419	chr5:79758752-79763419	0	+	79758752	79758752	8553170	3	150,147,358,	0,3058,4309,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	79774347	79816190	chr5:79774347-79816190	3	-	79774347	79774347	8553170	5	101,124,110,54,71,	0,3647,27257,29490,41772,
#Deleted in new
chr5	79849551	79849846	chr5:79849551-79849846	7	-	79849551	79849551	16724991	1	295,	0,
#Partially deleted in new
chr5	79936578	79967626	chr5:79936578-79967626	3	+	79936578	79936578	789624	3	302,219,40,	0,5832,31008,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	79976730	79991262	chr5:79976730-79991262	1	-	79982384	79991238	789624	6	5704,106,93,77,70,105,	0,11808,12421,13429,13863,14427,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	79976739	79991265	chr5:79976739-79991265	1	-	79983683	79991238	789624	9	7055,89,158,77,183,93,77,70,108,	0,8831,10210,11499,11722,12412,13420,13854,14418,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	79979760	79991245	chr5:79979760-79991245	1	-	79983683	79990204	789624	8	4034,89,158,77,183,93,77,88,	0,5810,7189,8478,8701,9391,10399,11397,
#Partially deleted in new
chr5	79982899	79991259	chr5:79982899-79991259	3	-	79983786	79991238	789624	8	895,158,77,183,93,77,70,102,	0,4050,5339,5562,6252,7260,7694,8258,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	79991310	80055906	chr5:79991310-80055906	0	+	79991310	79991310	8553170	5	102,44,204,101,122,	0,7021,48766,61720,64474,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	79991331	80055967	chr5:79991331-80055967	0	+	79991331	79991331	8553170	4	81,96,204,183,	0,7000,48745,64453,
#Deleted in new
chr5	80019608	80019920	chr5:80019608-80019920	7	+	80019608	80019608	16724991	1	312,	0,
#Deleted in new
chr5	80033170	80033302	chr5:80033170-80033302	7	-	80033170	80033170	16724991	1	132,	0,
#Partially deleted in new
chr5	80035347	80083287	chr5:80035347-80083287	3	+	80035537	80083141	789624	22	278,204,248,109,83,52,203,138,69,153,105,108,160,119,53,194,179,49,197,173,140,208,	0,4729,20437,22858,23360,24092,24355,26347,30061,32625,34958,35295,35673,36930,37927,41507,42701,43573,43714,44557,47058,47732,
#Partially deleted in new
chr5	80036022	80083282	chr5:80036022-80083282	1	+	80040261	80083141	789624	22	155,204,248,109,83,52,203,138,69,153,105,108,160,119,53,194,179,49,197,173,140,203,	0,4054,19762,22183,22685,23417,23680,25672,29386,31950,34283,34620,34998,36255,37252,40832,42026,42898,43039,43882,46383,47057,
#Partially deleted in new
chr5	80052373	80082404	chr5:80052373-80082404	0	-	80052373	80052373	8553170	4	528,261,122,45,	0,16140,27729,29986,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	80066348	80083654	chr5:80066348-80083654	3	-	80066348	80066348	789624	8	1533,261,160,138,158,122,178,155,	0,2165,5383,5737,6159,13754,16011,17151,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	80073271	80076879	chr5:80073271-80076879	0	+	80073271	80073271	8553170	5	56,159,167,205,25,	0,993,1932,2758,3583,
#Partially deleted in new
chr5	80078834	80083287	chr5:80078834-80083287	0	+	80078834	80078834	8553170	5	135,197,173,140,208,	0,227,1070,3571,4245,
#Deleted in new
chr5	80082003	80083188	chr5:80082003-80083188	0	+	80082003	80082003	8553170	3	309,140,109,	0,402,1076,
#Partially deleted in new
chr5	80128360	80143883	chr5:80128360-80143883	3	+	80128360	80128360	8553170	3	55,275,334,	0,562,15189,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	80138726	80256079	chr5:80138726-80256079	3	-	80143662	80255922	789624	12	5084,145,40,67,127,96,212,94,83,179,168,184,	0,7363,8518,12155,20109,27656,30608,36227,38588,39159,64159,117169,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	80156993	80167180	chr5:80156993-80167180	0	-	80156993	80156993	8553170	2	1969,798,	0,9389,
#Partially deleted in new
chr5	80177314	80255198	chr5:80177314-80255198	0	-	80177314	80177314	8553170	4	83,179,168,117,	0,571,25571,77767,
#Partially deleted in new
chr5	80288448	80289781	chr5:80288448-80289781	7	+	80288448	80288448	16724991	1	1333,	0,
#Partially deleted in new
chr5	80299677	80302847	chr5:80299677-80302847	7	-	80299677	80299677	16724991	2	868,233,	0,2937,
#Partially deleted in new
chr5	80306234	80306368	chr5:80306234-80306368	3	-	80306234	80306234	8553170	1	134,	0,
#Partially deleted in new
chr5	80315670	80315826	chr5:80315670-80315826	7	+	80315670	80315670	16724991	1	156,	0,
#Deleted in new
chr5	80319624	80320918	chr5:80319624-80320918	0	+	80320215	80320918	789624	2	77,782,	0,512,
#Deleted in new
chr5	80319974	80321842	chr5:80319974-80321842	3	+	80320215	80321508	789624	1	1868,	0,
#Deleted in new
chr5	80331572	80332541	chr5:80331572-80332541	7	-	80331572	80331572	16724991	1	969,	0,
#Deleted in new
chr5	80351020	80351956	chr5:80351020-80351956	7	-	80351020	80351020	16724991	1	936,	0,
#Deleted in new
chr5	80359079	80360040	chr5:80359079-80360040	7	-	80359079	80359079	16724991	1	961,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	80365725	80365832	chr5:80365725-80365832	3	-	80365725	80365725	8553170	1	107,	0,
#Partially deleted in new
chr5	80408012	80479350	chr5:80408012-80479350	3	+	80434147	80477377	0	18	141,109,2252,97,162,143,379,123,156,225,83,105,148,81,163,106,168,2132,	0,26096,28743,31923,35110,37250,40013,41578,42418,43472,47679,48448,48932,51401,64748,65741,66650,69206,
#Partially deleted in new
chr5	80408023	80479140	chr5:80408023-80479140	1	+	80434147	80477377	0	19	130,128,109,2252,97,162,143,379,123,156,225,83,105,148,81,163,106,168,1922,	0,3622,26085,28732,31912,35099,37239,40002,41567,42407,43461,47668,48437,48921,51390,64737,65730,66639,69195,
#Partially deleted in new
chr5	80408025	80479135	chr5:80408025-80479135	1	+	80434147	80477377	0	19	128,54,109,2252,97,162,143,379,123,156,225,83,105,148,81,163,106,168,1917,	0,19466,26083,28730,31910,35097,37237,40000,41565,42405,43459,47666,48435,48919,51388,64735,65728,66637,69193,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	80408054	80452460	chr5:80408054-80452460	0	+	80408054	80408054	8553170	10	99,109,2252,97,162,143,379,123,156,976,	0,26054,28701,31881,35068,37208,39971,41536,42376,43430,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	80408075	80437159	chr5:80408075-80437159	0	+	80437039	80437159	789624	4	78,109,93,404,	0,26033,27686,28680,
#Partially deleted in new
chr5	80408082	80440376	chr5:80408082-80440376	0	+	80408082	80408082	8553170	4	71,109,2252,441,	0,26026,28673,31853,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	80408114	80410340	chr5:80408114-80410340	0	+	80408114	80408114	8553170	2	39,649,	0,1577,
#Partially deleted in new
chr5	80441172	80448188	chr5:80441172-80448188	0	+	80441172	80441172	8553170	4	77,162,143,163,	0,1950,4090,6853,
#Partially deleted in new
chr5	80443048	80479153	chr5:80443048-80479153	0	+	80443048	80443048	8553170	14	236,143,122,123,156,225,83,105,148,81,163,106,168,1935,	0,2214,5234,6542,7382,8436,12643,13412,13896,16365,29712,30705,31614,34170,
#Partially deleted in new
chr5	80443151	80448259	chr5:80443151-80448259	0	+	80443151	80443816	789624	4	133,127,143,234,	0,642,2111,4874,
#Partially deleted in new
chr5	80445260	80450470	chr5:80445260-80450470	0	+	80445260	80449599	789624	3	145,123,40,	0,4330,5170,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	80453988	80479118	chr5:80453988-80479118	0	+	80453988	80453988	8553170	7	2577,148,81,163,106,168,1900,	0,2956,5425,18772,19765,20674,23230,
#Partially deleted in new
chr5	80459438	80477311	chr5:80459438-80477311	0	+	80459438	80473809	789624	4	56,106,168,93,	0,14315,15224,17780,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	80482292	80487953	chr5:80482292-80487953	3	-	80482292	80482292	8553170	3	874,96,181,	0,3173,5480,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	80482711	80488063	chr5:80482711-80488063	0	-	80482711	80482711	8553170	3	455,96,286,	0,2754,5066,
#Partially deleted in new
chr5	80487968	80542563	chr5:80487968-80542563	3	+	80488123	80541832	789624	6	180,126,166,218,136,891,	0,13823,25635,31724,34034,53704,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	80487968	80510807	chr5:80487968-80510807	0	+	80488123	80505995	789624	4	180,126,134,68,	0,13823,17974,22771,
#Partially deleted in new
chr5	80498533	80498971	chr5:80498533-80498971	7	-	80498533	80498533	16724991	1	438,	0,
#Partially deleted in new
chr5	80500331	80501400	chr5:80500331-80501400	7	+	80500331	80500331	16724991	2	676,76,	0,993,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	80501804	80522524	chr5:80501804-80522524	0	+	80501804	80501804	8553170	4	113,166,218,522,	0,11799,17888,20198,
#Partially deleted in new
chr5	80556754	80570488	chr5:80556754-80570488	3	-	80558474	80560019	789624	5	3288,81,86,148,335,	0,6980,9934,12205,13399,
#Partially deleted in new
chr5	80559968	80570250	chr5:80559968-80570250	0	-	80559968	80560019	789624	6	74,81,86,86,118,97,	0,3766,4415,6720,8991,10185,
#Deleted in new
chr5	80603382	80603644	chr5:80603382-80603644	7	-	80603382	80603382	16724991	1	262,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	80608622	80622524	chr5:80608622-80622524	3	-	80608622	80608622	789624	2	323,117,	0,13785,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	80626227	80654983	chr5:80626227-80654983	3	-	80629086	80654489	0	6	2938,116,127,106,50,580,	0,7649,11655,23161,27780,28176,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	80628016	80654674	chr5:80628016-80654674	1	-	80629086	80654489	0	7	922,127,116,127,106,50,271,	0,1022,5860,9866,21372,25991,26387,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	80628123	80654552	chr5:80628123-80654552	1	-	80629144	80654489	789624	5	1042,127,106,50,149,	0,9759,21265,25884,26280,
#Partially deleted in new
chr5	80628222	80654558	chr5:80628222-80654558	1	-	80629086	80649474	0	5	943,116,127,106,155,	0,5654,9660,21166,26181,
#Partially deleted in new
chr5	80628537	80654547	chr5:80628537-80654547	0	-	80628537	80628537	8553170	4	628,116,106,144,	0,5339,20851,25866,
#Partially deleted in new
chr5	80629063	80654101	chr5:80629063-80654101	0	-	80629063	80629063	8553170	5	102,116,127,106,94,	0,4813,8819,20325,24944,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	80630312	80631590	chr5:80630312-80631590	3	-	80630312	80630312	8553170	2	160,389,	0,889,
#Partially deleted in new
chr5	80648940	80654035	chr5:80648940-80654035	0	-	80648940	80648940	8553170	2	554,28,	0,5067,
#Deleted in new
chr5	80649999	80650086	chr5:80649999-80650086	7	-	80649999	80649999	16724991	1	87,	0,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr5	80654647	80876460	chr5:80654647-80876460	3	+	80654727	80875862	0	24	317,121,221,213,117,118,146,167,113,115,85,110,133,188,169,65,117,108,112,158,187,130,172,710,	0,1763,10495,15449,17596,18093,20335,24279,70805,74203,86816,89858,106898,113285,114187,121046,124072,132917,138085,158936,199482,210165,218468,221103,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	80655151	80656513	chr5:80655151-80656513	0	+	80655151	80655151	8553170	2	428,103,	0,1259,
#Partially deleted in new
chr5	80715204	80761610	chr5:80715204-80761610	0	+	80715204	80715204	8553170	6	189,113,115,85,110,65,	0,10248,13646,26259,29301,46341,
#Deleted in new
chr5	80746338	80746819	chr5:80746338-80746819	7	-	80746338	80746338	16724991	1	481,	0,
#Deleted in new
chr5	80855506	80855843	chr5:80855506-80855843	7	-	80855506	80855506	16724991	1	337,	0,
#Partially deleted in new
chr5	80947696	80960907	chr5:80947696-80960907	3	-	80947696	80947696	789624	4	298,76,34,127,	0,632,3750,13084,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	80951128	80952980	chr5:80951128-80952980	1	-	80951128	80951128	8553170	2	352,313,	0,1539,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr5	80960671	81230156	chr5:80960671-81230156	3	+	80960738	81225770	789624	27	355,107,148,90,254,80,194,110,119,161,67,137,83,249,383,126,90,107,113,61,104,85,198,80,118,69,4479,	0,82205,107360,109820,112527,119449,119924,125130,126163,132129,133624,134184,148324,151938,152866,162970,166402,219503,240658,246173,246574,247682,251694,255204,256684,259038,265006,
#Partially deleted in new
chr5	80960688	81225812	chr5:80960688-81225812	0	+	80960738	81216985	789624	28	338,107,148,90,254,80,194,110,119,161,67,137,83,249,383,126,90,107,113,61,104,85,198,80,31,118,69,135,	0,82188,107343,109803,112510,119432,119907,125113,126146,132112,133607,134167,148307,151921,152849,162953,166385,219486,240641,246156,246557,247665,251677,255187,256275,256667,259021,264989,
#Partially deleted in new
chr5	80960738	81088579	chr5:80960738-81088579	1	+	80960738	81087432	789624	10	288,107,148,90,254,80,194,110,119,1452,	0,82138,107293,109753,112460,119382,119857,125063,126096,126389,
#Partially deleted in new
chr5	80997182	80998047	chr5:80997182-80998047	7	-	80997182	80997182	16724991	2	502,34,	0,831,
#Partially deleted in new
chr5	81019406	81073222	chr5:81019406-81073222	0	+	81019406	81019406	8553170	5	179,107,148,90,24,	0,23470,48625,51085,53792,
#Partially deleted in new
chr5	81070023	81088564	chr5:81070023-81088564	0	+	81070023	81070023	8553170	7	558,254,80,194,110,119,1437,	0,3175,10097,10572,15778,16811,17104,
#Partially deleted in new
chr5	81092915	81096506	chr5:81092915-81096506	0	+	81092915	81092915	8553170	4	46,67,137,420,	0,1380,1940,3171,
#Deleted in new
chr5	81113384	81114852	chr5:81113384-81114852	3	-	81113384	81113384	8553170	2	514,41,	0,1427,
#Partially deleted in new
chr5	81204083	81301485	chr5:81204083-81301485	0	-	81204083	81204083	8553170	3	240,133,199,	0,15576,97203,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	81210100	81301497	chr5:81210100-81301497	3	-	81210100	81210100	8553170	4	80,133,161,211,	0,9559,13214,91186,
#Partially deleted in new
chr5	81233284	81266397	chr5:81233284-81266397	3	+	81251132	81266258	0	10	93,172,199,96,222,86,124,135,126,259,	0,17828,19410,21111,21708,23630,24448,25835,30206,32854,
#Partially deleted in new
chr5	81233319	81266395	chr5:81233319-81266395	1	+	81251132	81266258	0	10	62,172,199,96,222,86,124,135,126,257,	0,17793,19375,21076,21673,23595,24413,25800,30171,32819,
#Partially deleted in new
chr5	81233319	81255057	chr5:81233319-81255057	0	+	81251132	81255057	789624	5	62,172,199,96,65,	0,17793,19375,21076,21673,
#Partially deleted in new
chr5	81233323	81266397	chr5:81233323-81266397	1	+	81251132	81266258	0	11	54,164,172,199,96,222,86,124,135,126,259,	0,10718,17789,19371,21072,21669,23591,24409,25796,30167,32815,
#Partially deleted in new
chr5	81233323	81254974	chr5:81233323-81254974	0	+	81233323	81233323	8553170	5	54,172,199,96,30,	0,17789,19371,21072,21621,
#Partially deleted in new
chr5	81233323	81255040	chr5:81233323-81255040	0	+	81233323	81233323	8553170	5	54,172,199,96,60,	0,17789,19371,21072,21657,
#Partially deleted in new
chr5	81233324	81256940	chr5:81233324-81256940	0	+	81251132	81256940	789624	5	53,172,199,96,26,	0,17788,19370,21071,23590,
#Partially deleted in new
chr5	81233325	81254547	chr5:81233325-81254547	0	+	81233325	81233325	8553170	4	56,172,199,152,	0,17787,19369,21070,
#Partially deleted in new
chr5	81233338	81252286	chr5:81233338-81252286	0	+	81233338	81233338	8553170	3	43,172,391,	0,17774,18557,
#Partially deleted in new
chr5	81235758	81301523	chr5:81235758-81301523	0	-	81235758	81235758	8553170	2	364,237,	0,65528,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	81237564	81301544	chr5:81237564-81301544	1	-	81237564	81237564	789624	4	1796,83,87,258,	0,9325,13138,63722,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	81237564	81301559	chr5:81237564-81301559	0	-	81237564	81237564	789624	2	1796,273,	0,63722,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	81237827	81301555	chr5:81237827-81301555	1	-	81237827	81237827	789624	3	1528,666,269,	0,6916,63459,
#Deleted in new
chr5	81242329	81242599	chr5:81242329-81242599	7	-	81242329	81242329	16724991	1	270,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	81244857	81301560	chr5:81244857-81301560	0	-	81244857	81244857	8553170	3	552,83,274,	0,2032,56429,
#Partially deleted in new
chr5	81252732	81257923	chr5:81252732-81257923	0	+	81252732	81252732	8553170	4	161,96,222,191,	0,1663,2260,5000,
#Partially deleted in new
chr5	81254580	81266396	chr5:81254580-81266396	0	+	81254580	81254580	8553170	5	634,124,135,126,258,	0,3152,4539,8910,11558,
#Partially deleted in new
chr5	81254982	81259384	chr5:81254982-81259384	0	+	81254982	81254982	8553170	4	232,86,124,265,	0,1932,2750,4137,
#Partially deleted in new
chr5	81301589	81312917	chr5:81301589-81312917	0	+	81301589	81301589	8553170	5	81,151,93,69,374,	0,6971,7356,9621,10954,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	81301602	81313297	chr5:81301602-81313297	3	+	81304757	81312662	789624	5	3539,151,93,69,754,	0,6958,7343,9608,10941,
#Partially deleted in new
chr5	81301611	81313297	chr5:81301611-81313297	1	+	81304757	81312662	789624	6	87,401,151,93,69,754,	0,3129,6949,7334,9599,10932,
#Partially deleted in new
chr5	81301622	81312972	chr5:81301622-81312972	0	+	81301622	81301622	8553170	5	76,151,93,69,429,	0,6938,7323,9588,10921,
#Partially deleted in new
chr5	81301623	81313154	chr5:81301623-81313154	1	+	81304757	81312662	789624	6	47,401,151,93,69,611,	0,3117,6937,7322,9587,10920,
#Partially deleted in new
chr5	81301640	81312662	chr5:81301640-81312662	1	+	81304757	81312662	789624	6	415,401,151,93,69,119,	0,3100,6920,7305,9570,10903,
#Partially deleted in new
chr5	81301661	81309158	chr5:81301661-81309158	0	+	81301661	81301661	8553170	3	37,151,213,	0,6899,7284,
#Deleted in new
chr5	81308406	81312614	chr5:81308406-81312614	0	+	81308406	81308406	8553170	4	305,93,69,71,	0,539,2804,4137,
#Deleted in new
chr5	81308667	81312973	chr5:81308667-81312973	0	+	81308667	81308667	8553170	3	371,69,430,	0,2543,3876,
#Partially deleted in new
chr5	81330004	81394143	chr5:81330004-81394143	3	-	81330393	81394114	0	15	539,127,129,134,84,64,56,151,120,157,136,102,61,70,156,	0,809,2472,5763,12667,13813,14155,14886,15880,17769,29898,33783,41745,55752,63983,
#Partially deleted in new
chr5	81330361	81344203	chr5:81330361-81344203	0	-	81330361	81330361	8553170	6	182,127,129,134,64,44,	0,452,2115,5406,13456,13798,
#Partially deleted in new
chr5	81330452	81335902	chr5:81330452-81335902	0	-	81330452	81330452	8553170	3	488,129,135,	0,2024,5315,
#Partially deleted in new
chr5	81359851	81394179	chr5:81359851-81394179	1	-	81359894	81394114	0	5	187,102,61,70,192,	0,3936,11898,25905,34136,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr5	81413020	81751253	chr5:81413020-81751253	3	-	81420503	81751042	789624	17	7513,99,29,79,71,55,36,49,68,71,67,60,90,85,62,73,273,	0,15564,24409,27537,29632,33847,35769,48034,53953,60679,61475,76229,100607,202452,223536,237246,337960,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr5	81417359	81751253	chr5:81417359-81751253	1	-	81420503	81751042	789624	17	3174,99,29,79,71,55,36,49,92,71,67,60,90,85,62,73,273,	0,11225,20070,23198,25293,29508,31430,43695,49614,56340,57136,71890,96268,198113,219197,232907,333621,
#Partially deleted in new
chr5	81419872	81751048	chr5:81419872-81751048	1	-	81420503	81751042	789624	15	661,29,79,71,55,36,49,68,71,67,60,85,62,73,68,	0,17557,20685,22780,26995,28917,41182,47101,53827,54623,69377,195600,216684,230394,331108,
#Partially deleted in new
chr5	81419917	81751250	chr5:81419917-81751250	1	-	81420503	81751042	789624	16	616,99,29,79,71,55,36,49,68,71,67,60,85,62,73,270,	0,8667,17512,20640,22735,26950,28872,41137,47056,53782,54578,69332,195555,216639,230349,331063,
#Partially deleted in new
chr5	81419935	81513717	chr5:81419935-81513717	0	-	81420503	81513717	789624	13	598,99,29,79,71,55,36,49,92,71,67,60,90,	0,8649,17494,20622,22717,26932,28854,41119,47038,53764,54560,69314,93692,
#Partially deleted in new
chr5	81419962	81513717	chr5:81419962-81513717	0	-	81420503	81513717	789624	12	571,99,99,71,55,36,49,68,71,67,60,90,	0,8622,20575,22690,26905,28827,41092,47011,53737,54533,69287,93665,
#Partially deleted in new
chr5	81419978	81448063	chr5:81419978-81448063	0	-	81419978	81419978	8553170	7	555,99,29,79,71,55,154,	0,8606,17451,20579,22674,26889,27931,
#Partially deleted in new
chr5	81420013	81751047	chr5:81420013-81751047	1	-	81420503	81751042	789624	16	520,99,29,79,71,55,36,49,68,71,67,90,85,62,73,67,	0,8571,17416,20544,22639,26854,28776,41041,46960,53686,54482,93614,195459,216543,230253,330967,
#Partially deleted in new
chr5	81420180	81751097	chr5:81420180-81751097	1	-	81420503	81751042	789624	16	353,99,29,79,71,55,36,49,92,71,67,60,85,62,73,117,	0,8404,17249,20377,22472,26687,28609,40874,46793,53519,54315,69069,195292,216376,230086,330800,
#Partially deleted in new
chr5	81420287	81437830	chr5:81420287-81437830	0	-	81420287	81420287	8553170	3	246,99,401,	0,8297,17142,
#Partially deleted in new
chr5	81420434	81443273	chr5:81420434-81443273	0	-	81420434	81420434	8553170	5	99,99,29,79,621,	0,8150,16995,20123,22218,
#Partially deleted in new
chr5	81446868	81751797	chr5:81446868-81751797	0	-	81446868	81446868	8553170	12	54,36,49,68,71,67,60,90,85,62,73,130,	0,1921,14186,20105,26831,27627,42381,66759,168604,189688,203398,304799,
#Partially deleted in new
chr5	81466972	81751120	chr5:81466972-81751120	0	-	81466972	81466972	8553170	7	69,71,67,60,90,85,140,	0,6727,7523,22277,46655,148500,284008,
#Partially deleted in new
chr5	81466973	81751022	chr5:81466973-81751022	0	-	81466973	81710727	789624	10	68,71,67,60,90,85,62,73,91,42,	0,6726,7522,22276,46654,148499,169583,183293,243704,284007,
#Partially deleted in new
chr5	81467016	81750901	chr5:81467016-81750901	0	-	81467016	81467016	8553170	9	25,71,67,60,90,85,62,73,99,	0,6683,7479,22233,46611,148456,169540,183250,283786,
#Partially deleted in new
chr5	81473699	81750757	chr5:81473699-81750757	0	-	81473699	81473699	8553170	8	71,67,60,90,85,62,73,58,	0,796,15550,39928,141773,162857,176567,277000,
#Partially deleted in new
chr5	81615055	81751028	chr5:81615055-81751028	0	-	81615055	81615055	8553170	4	502,62,73,48,	0,21501,35211,135925,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	81615485	81616585	chr5:81615485-81616585	0	-	81615485	81615485	8553170	2	72,501,	0,599,
#Partially deleted in new
chr5	81636471	81751016	chr5:81636471-81751016	0	-	81636471	81636471	8553170	3	147,73,36,	0,13795,114509,
#Deleted in new
chr5	81851600	81852201	chr5:81851600-81852201	3	+	81851600	81851600	8553170	1	601,	0,
#Deleted in new
chr5	81892489	81892721	chr5:81892489-81892721	7	+	81892489	81892489	16724991	2	169,40,	0,192,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	81972024	82256139	chr5:81972024-82256139	3	+	81987570	82253425	789624	8	282,120,108,139,98,98,116,2072,	0,15534,86470,192374,206465,280537,281289,282043,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	81972024	82148117	chr5:81972024-82148117	1	+	81987570	82147351	789624	4	282,120,108,928,	0,15534,86470,175165,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	81972050	82254792	chr5:81972050-82254792	1	+	81987570	82253425	789624	9	256,135,120,108,139,98,98,116,725,	0,4142,15508,86444,192348,206439,280511,281263,282017,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	81972156	82147504	chr5:81972156-82147504	1	+	81987570	82147351	789624	4	435,120,108,315,	0,15402,86338,175033,
#Partially deleted in new
chr5	81972260	82253431	chr5:81972260-82253431	0	+	81987570	82242859	789624	8	46,120,108,139,98,86,98,118,	0,15298,86234,192138,206229,270536,280301,281053,
#Partially deleted in new
chr5	81987557	82252713	chr5:81987557-82252713	1	+	81987570	82252663	789624	5	121,108,139,98,152,	0,70937,176841,190932,265004,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	81991994	81992481	chr5:81991994-81992481	3	+	81991994	81991994	8553170	1	487,	0,
#Partially deleted in new
chr5	82009601	82010094	chr5:82009601-82010094	7	-	82009601	82009601	16724991	1	493,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	82073054	82073702	chr5:82073054-82073702	3	-	82073054	82073054	8553170	1	648,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	82078426	82078724	chr5:82078426-82078724	3	+	82078426	82078426	8553170	1	298,	0,
#Partially deleted in new
chr5	82111391	82276297	chr5:82111391-82276297	0	+	82111391	82111391	8553170	4	64,98,98,153,	0,67098,141170,164753,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	82164444	82276857	chr5:82164444-82276857	0	+	82164444	82164444	8553170	3	93,98,713,	0,14045,111700,
#Deleted in new
chr5	82265156	82265259	chr5:82265156-82265259	7	-	82265156	82265156	16724991	1	103,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	82273357	82278577	chr5:82273357-82278577	3	-	82276108	82278323	0	4	2898,121,160,258,	0,3040,4335,4962,
#Partially deleted in new
chr5	82274523	82278341	chr5:82274523-82278341	1	-	82275253	82278323	789624	6	590,87,78,121,160,22,	0,685,1654,1874,3169,3796,
#Partially deleted in new
chr5	82275243	82278351	chr5:82275243-82278351	1	-	82275253	82278323	789624	5	52,78,121,160,32,	0,934,1154,2449,3076,
#Partially deleted in new
chr5	82275420	82278396	chr5:82275420-82278396	1	-	82276108	82278323	789624	4	714,68,160,77,	0,1030,2272,2899,
#Partially deleted in new
chr5	82275877	82278354	chr5:82275877-82278354	1	-	82276310	82278323	789624	3	641,160,35,	0,1815,2442,
#Partially deleted in new
chr5	82276059	82277951	chr5:82276059-82277951	0	-	82276059	82276059	8553170	3	196,121,259,	0,338,1633,
#Partially deleted in new
chr5	82276154	82278143	chr5:82276154-82278143	0	-	82276154	82276154	8553170	4	101,121,160,213,	0,243,1538,1776,
#Deleted in new
chr5	82277358	82278355	chr5:82277358-82278355	1	-	82277688	82278323	789624	2	494,36,	0,961,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	82279461	82318803	chr5:82279461-82318803	0	+	82279461	82279461	8553170	10	417,52,52,41,59,236,548,51,241,806,	0,1498,16031,24025,24312,25153,25472,30695,33149,38536,
#Partially deleted in new
chr5	82295448	82318300	chr5:82295448-82318300	4	+	82295448	82295448	16724991	7	96,41,59,236,51,241,303,	0,8038,8325,9166,14708,17162,22549,
#Partially deleted in new
chr5	82305346	82318328	chr5:82305346-82318328	3	+	82305401	82318300	789624	4	135,51,241,331,	0,4810,7264,12651,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	82308858	82386977	chr5:82308858-82386977	0	+	82308858	82308858	8553170	8	1349,241,92,138,73,109,69,1453,	0,3752,32840,35469,39732,42045,75536,76666,
#Partially deleted in new
chr5	82310035	82318380	chr5:82310035-82318380	0	+	82310035	82310035	8553170	3	172,241,383,	0,2575,7962,
#Deleted in new
chr5	82382944	82386516	chr5:82382944-82386516	0	+	82382944	82382944	8553170	2	1519,992,	0,2580,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	82545861	82546310	chr5:82545861-82546310	3	-	82545861	82545861	8553170	1	449,	0,
#Deleted in new
chr5	82586775	82587411	chr5:82586775-82587411	3	-	82586775	82586775	8553170	1	636,	0,
#Deleted in new
chr5	82765403	82766333	chr5:82765403-82766333	3	+	82765403	82765403	8553170	1	930,	0,
#Deleted in new
chr5	82777796	82778586	chr5:82777796-82778586	7	+	82777796	82777796	16724991	1	790,	0,
#Deleted in new
chr5	82824883	82825184	chr5:82824883-82825184	7	+	82824883	82824883	16724991	1	301,	0,
#Deleted in new
chr5	82840154	82840224	chr5:82840154-82840224	3	+	82840154	82840154	5263520	1	70,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	82850863	82859836	chr5:82850863-82859836	3	-	82850863	82850863	789624	4	303,88,148,93,	0,1147,3901,8880,
#Deleted in new
chr5	82919375	82921119	chr5:82919375-82921119	3	-	82919375	82919375	8553170	2	587,158,	0,1586,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	82940457	82940983	chr5:82940457-82940983	3	-	82940457	82940457	8553170	1	526,	0,
#Partially deleted in new
chr5	82968887	82977153	chr5:82968887-82977153	7	+	82968887	82968887	16724991	2	223,871,	0,7395,
#Deleted in new
chr5	83012284	83013109	chr5:83012284-83013109	3	-	83012284	83012284	8553170	1	825,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	83049375	83050964	chr5:83049375-83050964	3	-	83049375	83049375	8553170	1	1589,	0,
#Partially deleted in new
chr5	83052845	83077496	chr5:83052845-83077496	3	-	83057083	83077323	789624	4	4309,35,110,176,	0,9031,12162,24475,
#Partially deleted in new
chr5	83054061	83077367	chr5:83054061-83077367	0	-	83054061	83054061	8553170	5	3093,35,110,68,47,	0,7815,10946,17301,23259,
#Partially deleted in new
chr5	83056534	83061975	chr5:83056534-83061975	0	-	83056534	83056534	8553170	2	620,99,	0,5342,
#Partially deleted in new
chr5	83056726	83077453	chr5:83056726-83077453	0	-	83056726	83056726	8553170	3	428,35,133,	0,5150,20594,
#Partially deleted in new
chr5	83056766	83077424	chr5:83056766-83077424	0	-	83056766	83056766	8553170	2	388,104,	0,20554,
#Partially deleted in new
chr5	83056883	83077863	chr5:83056883-83077863	0	-	83056883	83056883	8553170	4	271,35,110,146,	0,4993,8124,20834,
#Deleted in new
chr5	83064203	83064337	chr5:83064203-83064337	3	-	83064203	83064203	789624	1	134,	0,
#Partially deleted in new
chr5	83077497	83353758	chr5:83077497-83353758	1	+	83104919	83353242	0	8	165,149,176,167,156,107,148,628,	0,27412,33530,118272,126054,127317,181032,275633,
#Partially deleted in new
chr5	83077526	83353711	chr5:83077526-83353711	1	+	83104919	83353242	0	8	89,149,176,167,156,107,148,587,	0,27383,33501,118243,126025,127288,181003,275598,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	83077556	83311069	chr5:83077556-83311069	0	+	83077556	83077556	8553170	8	59,149,176,167,156,107,148,281,	0,27353,33471,118213,125995,127258,180973,233232,
#Partially deleted in new
chr5	83077569	83353711	chr5:83077569-83353711	1	+	83104919	83353242	0	8	46,149,176,167,156,107,148,581,	0,27340,33458,118200,125982,127245,180960,275561,
#Partially deleted in new
chr5	83077592	83353787	chr5:83077592-83353787	3	+	83104919	83353242	0	8	70,149,176,167,156,107,148,663,	0,27317,33435,118177,125959,127222,180937,275532,
#Partially deleted in new
chr5	83104907	83259339	chr5:83104907-83259339	0	+	83104907	83104907	8553170	6	151,176,167,156,107,810,	0,6120,90862,98644,99907,153622,
#Partially deleted in new
chr5	83201228	83202141	chr5:83201228-83202141	7	+	83201228	83201228	16724991	2	517,67,	0,846,
#Partially deleted in new
chr5	83279920	83280644	chr5:83279920-83280644	7	-	83279920	83279920	16724991	1	724,	0,
#Deleted in new
chr5	83426675	83427030	chr5:83426675-83427030	7	+	83426675	83426675	16724991	1	355,	0,
#Partially deleted in new
chr5	83471464	83582303	chr5:83471464-83582303	3	+	83483518	83580434	789624	15	559,76,375,175,128,294,2961,5262,114,114,159,83,145,183,1997,	0,12048,18633,22081,22339,40638,47884,65542,74072,76506,81899,83491,100951,108515,108842,
#Partially deleted in new
chr5	83471617	83483604	chr5:83471617-83483604	0	+	83471617	83471617	8553170	2	406,92,	0,11895,
#Partially deleted in new
chr5	83471673	83582303	chr5:83471673-83582303	1	+	83483518	83580434	789624	14	350,76,375,175,128,294,2961,114,114,159,83,145,183,1997,	0,11839,18424,21872,22130,40429,47675,73863,76297,81690,83282,100742,108306,108633,
#Partially deleted in new
chr5	83471673	83582303	chr5:83471673-83582303	1	+	83483518	83580434	789624	14	350,76,375,175,128,294,5262,114,114,159,83,145,183,1997,	0,11839,18424,21872,22130,40429,65333,73863,76297,81690,83282,100742,108306,108633,
#Partially deleted in new
chr5	83471763	83581162	chr5:83471763-83581162	1	+	83490171	83580434	789624	14	260,76,375,175,128,294,2961,114,114,159,83,145,183,856,	0,11749,18334,21782,22040,40339,47585,73773,76207,81600,83192,100652,108216,108543,
#Partially deleted in new
chr5	83471776	83539684	chr5:83471776-83539684	0	+	83483518	83539684	789624	7	247,76,375,175,128,294,2678,	0,11736,18321,21769,22027,40326,65230,
#Partially deleted in new
chr5	83471790	83512940	chr5:83471790-83512940	1	+	83483518	83512419	789624	6	233,76,375,175,128,838,	0,11722,18307,21755,22013,40312,
#Partially deleted in new
chr5	83471924	83580448	chr5:83471924-83580448	1	+	83483518	83580434	789624	13	99,76,375,175,128,294,114,114,159,83,145,183,142,	0,11588,18173,21621,21879,40178,73612,76046,81439,83031,100491,108055,108382,
#Partially deleted in new
chr5	83512101	83537247	chr5:83512101-83537247	0	+	83512101	83512101	8553170	2	295,241,	0,24905,
#Partially deleted in new
chr5	83531351	83562314	chr5:83531351-83562314	1	-	83531351	83531351	789624	3	65,75,284,	0,2747,30679,
#Partially deleted in new
chr5	83535613	83581336	chr5:83535613-83581336	0	+	83535613	83535613	8553170	8	6655,114,114,159,83,145,183,1030,	0,9923,12357,17750,19342,36802,44366,44693,
#Partially deleted in new
chr5	83541476	83581320	chr5:83541476-83581320	3	-	83541476	83541476	8553170	2	225,228,	0,39616,
#Partially deleted in new
chr5	83541947	83553474	chr5:83541947-83553474	0	+	83541947	83541947	8553170	5	321,106,114,114,111,	0,3017,3589,6023,11416,
#Partially deleted in new
chr5	83553361	83580400	chr5:83553361-83580400	0	+	83553361	83553361	8553170	4	161,83,145,421,	0,1594,19054,26618,
#Partially deleted in new
chr5	83637804	83721613	chr5:83637804-83721613	3	-	83641495	83673523	789624	5	3981,303,372,126,825,	0,6558,14648,35619,82984,
#Partially deleted in new
chr5	83644362	83673737	chr5:83644362-83673737	0	-	83644362	83673523	789624	3	303,372,314,	0,8090,29061,
#Partially deleted in new
chr5	83644540	83674308	chr5:83644540-83674308	0	-	83644540	83673523	789624	4	125,372,126,176,	0,7912,28883,29592,
#Partially deleted in new
chr5	83644587	83673544	chr5:83644587-83673544	0	-	83644587	83673523	789624	3	78,369,121,	0,7865,28836,
#Partially deleted in new
chr5	83644628	83674813	chr5:83644628-83674813	0	-	83644628	83673523	789624	4	37,372,126,288,	0,7824,28795,29897,
#Partially deleted in new
chr5	83652019	83682538	chr5:83652019-83682538	1	-	83652438	83673523	789624	3	805,126,214,	0,21404,30305,
#Partially deleted in new
chr5	83652465	83720813	chr5:83652465-83720813	0	-	83652465	83673523	789624	4	359,126,50,25,	0,20958,22822,68323,
#Deleted in new
chr5	83685865	83686018	chr5:83685865-83686018	3	+	83685865	83685865	8553170	1	153,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	83703447	83703543	chr5:83703447-83703543	3	+	83703447	83703447	8553170	1	96,	0,
#Deleted in new
chr5	83746387	83746989	chr5:83746387-83746989	7	-	83746387	83746387	16724991	1	602,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	83803553	83803685	chr5:83803553-83803685	3	+	83803553	83803553	8553170	1	132,	0,
#Deleted in new
chr5	83875165	83875821	chr5:83875165-83875821	7	-	83875165	83875165	16724991	1	656,	0,
#Partially deleted in new
chr5	83940553	84384793	chr5:83940553-84384793	3	-	83943418	84384374	0	11	3015,156,185,145,156,182,114,129,30,129,486,	0,22651,119746,124146,125897,166095,196687,239839,289301,313530,443754,
#Partially deleted in new
chr5	83940599	84384386	chr5:83940599-84384386	1	-	83943418	84384374	0	10	2969,156,185,145,156,182,114,129,129,79,	0,22605,119700,124100,125851,166049,196641,239793,313484,443708,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	84047605	84078828	chr5:84047605-84078828	0	-	84047605	84047605	8553170	5	667,185,145,156,200,	0,12694,17094,18845,31023,
#Partially deleted in new
chr5	84106659	84181242	chr5:84106659-84181242	0	-	84106659	84106659	8553170	4	171,114,129,144,	0,30581,73733,74439,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	84196882	84196989	chr5:84196882-84196989	3	+	84196882	84196882	8553170	1	107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	84384426	84399651	chr5:84384426-84399651	1	+	84384426	84384426	8553170	3	173,342,67,	0,3395,15158,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	84384492	84490765	chr5:84384492-84490765	0	+	84384492	84384492	8553170	5	107,168,115,68,108,	0,1395,3329,15092,106165,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	84384555	84417316	chr5:84384555-84417316	0	+	84384555	84384555	8553170	4	44,115,68,38,	0,3266,15029,32723,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	84384846	84388057	chr5:84384846-84388057	1	+	84384846	84384846	8553170	5	32,73,43,168,236,	0,711,905,1041,2975,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	84385478	84400782	chr5:84385478-84400782	3	+	84385478	84385478	8553170	5	316,168,115,68,125,	0,409,2343,14106,15179,
#Deleted in new
chr5	84999811	85000315	chr5:84999811-85000315	7	-	84999811	84999811	16724991	1	504,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	85112341	85112756	chr5:85112341-85112756	3	-	85112341	85112341	8553170	1	415,	0,
#Partially deleted in new
chr5	85190628	85190830	chr5:85190628-85190830	7	-	85190628	85190628	16724991	1	202,	0,
#Partially deleted in new
chr5	85210059	85210903	chr5:85210059-85210903	7	-	85210059	85210059	16724991	2	136,448,	0,396,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	85212957	85213614	chr5:85212957-85213614	3	-	85212957	85212957	8553170	1	657,	0,
#Deleted in new
chr5	85237680	85238074	chr5:85237680-85238074	7	-	85237680	85237680	16724991	2	238,142,	0,252,
#Deleted in new
chr5	85420027	85420451	chr5:85420027-85420451	3	-	85420027	85420027	8553170	1	424,	0,
#Deleted in new
chr5	85429701	85430184	chr5:85429701-85430184	3	+	85429701	85429701	8553170	1	483,	0,
#Deleted in new
chr5	85446973	85447758	chr5:85446973-85447758	3	+	85446973	85446973	8553170	1	785,	0,
#Partially deleted in new
chr5	85464433	85465310	chr5:85464433-85465310	7	+	85464433	85464433	16724991	1	877,	0,
#Deleted in new
chr5	85549408	85549952	chr5:85549408-85549952	7	+	85549408	85549408	16724991	1	544,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	85663231	85664684	chr5:85663231-85664684	3	+	85663231	85663231	8553170	1	1453,	0,
#Deleted in new
chr5	85762558	85763138	chr5:85762558-85763138	7	+	85762558	85762558	16724991	1	580,	0,
#Deleted in new
chr5	85848501	85849199	chr5:85848501-85849199	3	+	85848501	85848501	8553170	1	698,	0,
#Deleted in new
chr5	86087525	86087847	chr5:86087525-86087847	7	+	86087525	86087525	16724991	1	322,	0,
#Partially deleted in new
chr5	86282459	86296463	chr5:86282459-86296463	7	+	86282459	86282459	16724991	8	484,52,170,52,173,237,215,197,	0,2369,3239,4437,5215,8367,10660,13807,
#Partially deleted in new
chr5	86282765	86296309	chr5:86282765-86296309	5	+	86282765	86282765	16724991	9	178,23,52,170,52,173,237,215,43,	0,1606,2063,2933,4131,4909,8061,10354,13501,
#Deleted in new
chr5	86305232	86306149	chr5:86305232-86306149	3	-	86305232	86305232	8553170	1	917,	0,
#Deleted in new
chr5	86335023	86335808	chr5:86335023-86335808	3	+	86335023	86335023	8553170	1	785,	0,
#Partially deleted in new
chr5	86353802	86368853	chr5:86353802-86368853	0	+	86353802	86353802	8553170	3	146,131,280,	0,6209,14771,
#Partially deleted in new
chr5	86353802	86368854	chr5:86353802-86368854	3	+	86353802	86353802	8553170	3	146,131,304,	0,6209,14748,
#Deleted in new
chr5	86380659	86381426	chr5:86380659-86381426	3	-	86380659	86380659	8553170	1	767,	0,
#Deleted in new
chr5	86402464	86402960	chr5:86402464-86402960	7	+	86402464	86402464	16724991	1	496,	0,
#Partially deleted in new
chr5	86617903	86620962	chr5:86617903-86620962	3	+	86618055	86619469	789624	3	227,144,295,	0,1449,2764,
#Partially deleted in new
chr5	86617927	86620766	chr5:86617927-86620766	0	+	86617927	86617927	8553170	3	126,144,99,	0,1425,2740,
#Partially deleted in new
chr5	86617940	86620766	chr5:86617940-86620766	0	+	86617940	86617940	8553170	4	113,144,140,99,	0,1412,1798,2727,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	86617955	86620761	chr5:86617955-86620761	1	+	86618055	86619469	789624	2	175,1409,	0,1397,
#Partially deleted in new
chr5	86617972	86620766	chr5:86617972-86620766	1	+	86618055	86620673	789624	3	158,90,99,	0,1380,2695,
#Partially deleted in new
chr5	86617985	86620766	chr5:86617985-86620766	0	+	86617985	86617985	8553170	3	68,526,99,	0,1367,2682,
#Partially deleted in new
chr5	86618174	86620948	chr5:86618174-86620948	0	+	86618174	86618174	8553170	3	156,144,281,	0,1178,2493,
#Deleted in new
chr5	86620496	86620575	chr5:86620496-86620575	3	+	86620496	86620496	5263520	1	79,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	86663143	86663250	chr5:86663143-86663250	3	-	86663143	86663143	8553170	1	107,	0,
#Deleted in new
chr5	86746817	86749772	chr5:86746817-86749772	3	+	86746817	86746817	789624	2	250,1844,	0,1111,
#Deleted in new
chr5	86746930	86749578	chr5:86746930-86749578	1	+	86746930	86746930	8553170	3	137,58,257,	0,2185,2391,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	86797684	86800280	chr5:86797684-86800280	3	+	86797684	86797684	8553170	2	154,328,	0,2268,
#Deleted in new
chr5	86884230	86884881	chr5:86884230-86884881	7	-	86884230	86884230	16724991	1	651,	0,
#Partially deleted in new
chr5	86967320	87137712	chr5:86967320-87137712	3	+	86967320	86967320	8553170	3	219,124,259,	0,138094,170133,
#Deleted in new
chr5	87102602	87102846	chr5:87102602-87102846	3	-	87102602	87102602	8553170	1	244,	0,
#Deleted in new
chr5	87114878	87114954	chr5:87114878-87114954	3	-	87114878	87114878	5263520	1	76,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	87205407	87240145	chr5:87205407-87240145	0	-	87205407	87205407	8553170	2	287,1331,	0,33407,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	87216605	87239790	chr5:87216605-87239790	3	-	87216605	87216605	8553170	2	1745,976,	0,22209,
#Partially deleted in new
chr5	87267887	87390927	chr5:87267887-87390927	3	+	87268451	87390883	0	25	1103,153,136,71,118,32,53,151,79,121,157,88,78,158,77,173,160,143,116,87,68,89,78,135,128,	0,63460,64619,65379,70086,73402,78784,81326,85269,94663,95460,101925,104230,106275,106952,108505,108993,110508,111847,112621,115825,117413,118938,121505,122912,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr5	87267887	87391919	chr5:87267887-87391919	0	+	87268451	87366360	0	26	1103,153,136,71,118,32,53,151,79,121,157,145,88,78,158,77,173,160,143,116,87,68,89,78,225,1120,	0,63460,64619,65379,70086,73402,78784,81326,85269,94663,95460,98463,101925,104230,106275,106952,108505,108993,110508,111847,112621,115825,117413,118938,121415,122912,
#Partially deleted in new
chr5	87268932	87391931	chr5:87268932-87391931	1	+	87269047	87390883	0	25	123,153,136,71,118,32,53,151,79,121,157,88,78,158,77,173,160,143,116,87,68,89,78,135,1132,	0,62415,63574,64334,69041,72357,77739,80281,84224,93618,94415,100880,103185,105230,105907,107460,107948,109463,110802,111576,114780,116368,117893,120460,121867,
#Partially deleted in new
chr5	87268943	87391129	chr5:87268943-87391129	1	+	87330942	87390883	789624	26	112,46,153,136,71,118,32,53,151,79,121,157,88,78,158,77,173,160,143,116,87,68,89,78,135,330,	0,61994,62404,63563,64323,69030,72346,77728,80270,84213,93607,94404,100869,103174,105219,105896,107449,107937,109452,110791,111565,114769,116357,117882,120449,121856,
#Partially deleted in new
chr5	87268943	87391099	chr5:87268943-87391099	1	+	87269249	87390883	0	26	112,127,153,136,71,118,32,53,151,79,121,157,88,78,158,77,173,160,143,116,87,68,89,78,135,300,	0,217,62404,63563,64323,69030,72346,77728,80270,84213,93607,94404,100869,103174,105219,105896,107449,107937,109452,110791,111565,114769,116357,117882,120449,121856,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	87294188	87294473	chr5:87294188-87294473	3	-	87294188	87294188	8553170	1	285,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	87299686	87299797	chr5:87299686-87299797	3	-	87299686	87299686	8553170	1	111,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	87318415	87412908	chr5:87318415-87412908	0	-	87392859	87412794	789624	10	482,135,61,112,71,164,211,74,123,231,	0,74354,76628,80978,83286,86428,89560,90874,92808,94262,
#Partially deleted in new
chr5	87337971	87369901	chr5:87337971-87369901	0	+	87337971	87337971	8553170	8	120,32,53,151,79,121,157,89,	0,3318,8700,11242,15185,24579,25376,31841,
#Partially deleted in new
chr5	87376252	87399451	chr5:87376252-87399451	0	-	87392859	87399451	789624	4	266,135,61,58,	0,16517,18791,23141,
#Deleted in new
chr5	87376255	87377180	chr5:87376255-87377180	0	-	87376255	87376255	8553170	1	925,	0,
#Partially deleted in new
chr5	87391493	87408180	chr5:87391493-87408180	0	-	87391493	87391493	8553170	6	1411,80,61,112,71,205,	0,2911,3550,7900,10208,16482,
#Partially deleted in new
chr5	87392706	87404950	chr5:87392706-87404950	0	-	87392706	87392706	8553170	5	198,61,112,71,107,	0,2337,6687,8995,12137,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	87393416	87411294	chr5:87393416-87411294	1	-	87394986	87411241	789624	7	1688,112,71,164,211,74,71,	0,5977,8285,11427,14559,15873,17807,
#Partially deleted in new
chr5	87394264	87413019	chr5:87394264-87413019	3	-	87394445	87412794	0	9	220,61,112,71,164,211,74,123,342,	0,779,5129,7437,10579,13711,15025,16959,18413,
#Partially deleted in new
chr5	87394273	87412904	chr5:87394273-87412904	1	-	87394445	87411241	789624	9	211,61,112,71,164,211,74,123,470,	0,770,5120,7428,10570,13702,15016,16950,18161,
#Partially deleted in new
chr5	87394279	87401774	chr5:87394279-87401774	0	-	87394279	87394279	8553170	4	205,61,112,73,	0,764,5114,7422,
#Partially deleted in new
chr5	87394325	87408186	chr5:87394325-87408186	0	-	87394325	87394325	8553170	6	159,61,112,71,164,211,	0,718,5068,7376,10518,13650,
#Partially deleted in new
chr5	87404841	87412889	chr5:87404841-87412889	0	-	87404841	87404841	8553170	5	166,31,74,123,212,	0,3134,4448,6382,7836,
#Partially deleted in new
chr5	87408037	87412871	chr5:87408037-87412871	0	-	87408037	87408037	8553170	5	149,42,74,123,194,	0,1050,1252,3186,4640,
#Partially deleted in new
chr5	87409072	87412850	chr5:87409072-87412850	0	-	87409072	87409072	8553170	3	291,123,173,	0,2151,3605,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	87412341	87499340	chr5:87412341-87499340	3	+	87412341	87412341	8553170	5	720,77,297,144,875,	0,67595,70793,85364,86124,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	87420340	87420447	chr5:87420340-87420447	3	-	87420340	87420340	8553170	1	107,	0,
#Partially deleted in new
chr5	87662041	87679147	chr5:87662041-87679147	3	+	87662041	87662041	8553170	2	72,580,	0,16526,
#Partially deleted in new
chr5	88195046	88268799	chr5:88195046-88268799	0	-	88221683	88268723	789624	13	1442,97,175,114,154,61,152,157,87,98,84,104,79,	0,2622,3929,7915,10754,11392,11982,25516,26627,30722,33398,45766,73674,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	88195168	88268848	chr5:88195168-88268848	0	-	88205809	88220627	789624	9	1320,5407,201,61,152,157,98,84,128,	0,2500,10585,11270,11860,25394,30600,33276,73552,
#Partially deleted in new
chr5	88195205	88268848	chr5:88195205-88268848	3	-	88196210	88268723	789624	12	1283,97,175,114,141,61,152,157,98,84,104,128,	0,2463,3770,7756,10608,11233,11823,25357,30563,33239,45607,73515,
#Partially deleted in new
chr5	88195206	88268822	chr5:88195206-88268822	1	-	88196377	88207080	789624	10	1282,175,114,141,61,114,157,98,84,102,	0,3769,7755,10607,11232,11822,25356,30562,33238,73514,
#Partially deleted in new
chr5	88195827	88220631	chr5:88195827-88220631	1	-	88196210	88207080	789624	8	661,97,94,114,141,61,114,69,	0,1841,3148,7134,9986,10611,11201,24735,
#Partially deleted in new
chr5	88196116	88268829	chr5:88196116-88268829	1	-	88196210	88240886	789624	13	372,97,175,114,141,61,152,157,98,84,104,132,109,	0,1552,2859,6845,9697,10322,10912,24446,29652,32328,44696,63115,72604,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	88196349	88198451	chr5:88196349-88198451	0	-	88196349	88196349	8553170	2	139,783,	0,1319,
#Partially deleted in new
chr5	88202683	88268819	chr5:88202683-88268819	0	-	88207126	88268723	789624	9	392,141,61,114,157,98,84,104,99,	0,3130,3755,4345,17879,23085,25761,38129,66037,
#Partially deleted in new
chr5	88202942	88268857	chr5:88202942-88268857	1	-	88202957	88220627	789624	8	133,141,61,152,157,98,84,137,	0,2871,3496,4086,17620,22826,25502,65778,
#Partially deleted in new
chr5	88206419	88268829	chr5:88206419-88268829	0	-	88206419	88206419	8553170	5	80,152,157,84,109,	0,609,14143,22025,62301,
#Partially deleted in new
chr5	88207034	88268848	chr5:88207034-88268848	0	-	88207034	88207034	8553170	5	146,157,98,84,61,	0,13528,18734,21410,61753,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	88220614	88268847	chr5:88220614-88268847	0	-	88220614	88220614	8553170	6	105,171,98,84,104,127,	0,686,5154,7830,20198,48106,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	88228440	88251037	chr5:88228440-88251037	0	-	88228440	88228440	8553170	3	88,104,387,	0,12372,22210,
#Partially deleted in new
chr5	88228458	88269476	chr5:88228458-88269476	0	-	88228458	88228458	8553170	4	70,104,283,113,	0,12354,40329,40905,
#Deleted in new
chr5	88268894	88271225	chr5:88268894-88271225	1	+	88268894	88268894	8553170	2	133,700,	0,1631,
#Partially deleted in new
chr5	88268915	88436685	chr5:88268915-88436685	0	+	88268915	88268915	789624	3	112,60,413,	0,1610,167357,
#Partially deleted in new
chr5	88268937	88436684	chr5:88268937-88436684	0	+	88268937	88268937	789624	4	90,60,122,412,	0,1588,141135,167335,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	88269038	88276222	chr5:88269038-88276222	0	+	88269038	88269038	8553170	3	37,60,312,	0,1487,6872,
#Partially deleted in new
chr5	88269041	88436602	chr5:88269041-88436602	0	+	88269041	88269041	789624	4	78,60,122,330,	0,1484,141031,167231,
#Deleted in new
chr5	88269043	88270430	chr5:88269043-88270430	1	+	88269043	88269043	8553170	2	76,963,	0,424,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	88274257	88274376	chr5:88274257-88274376	7	-	88274257	88274257	16724991	1	119,	0,
#Deleted in new
chr5	88381956	88382725	chr5:88381956-88382725	7	+	88381956	88381956	16724991	1	769,	0,
#Deleted in new
chr5	88382771	88382907	chr5:88382771-88382907	3	+	88382771	88382771	8553170	1	136,	0,
#Deleted in new
chr5	88382947	88383260	chr5:88382947-88383260	7	+	88382947	88382947	16724991	1	313,	0,
#Partially deleted in new
chr5	88392194	88417491	chr5:88392194-88417491	0	+	88392194	88392194	8553170	3	148,122,305,	0,17878,24992,
#Partially deleted in new
chr5	88426410	88429814	chr5:88426410-88429814	2	-	88426410	88426410	8553170	2	383,38,	0,3366,
#Partially deleted in new
chr5	88426694	88436366	chr5:88426694-88436366	0	+	88426694	88426694	8553170	2	107,94,	0,9578,
#Partially deleted in new
chr5	88433891	88498697	chr5:88433891-88498697	3	-	88433891	88433891	8553170	2	387,25,	0,64781,
#Partially deleted in new
chr5	88507545	88684808	chr5:88507545-88684808	1	-	88507545	88507545	8553170	7	146,73,44,36,50,64,151,	0,736,33534,34489,163490,165419,177112,
#Partially deleted in new
chr5	88540510	88611776	chr5:88540510-88611776	0	-	88540510	88540510	8553170	3	613,36,113,	0,1524,71153,
#Partially deleted in new
chr5	88540726	88678445	chr5:88540726-88678445	0	-	88540726	88540726	8553170	4	397,36,50,98,	0,1308,130309,137621,
#Partially deleted in new
chr5	88540727	88678445	chr5:88540727-88678445	0	-	88540727	88540727	8553170	5	314,36,50,64,98,	0,1307,130308,132237,137620,
#Partially deleted in new
chr5	88540830	88659835	chr5:88540830-88659835	0	-	88540830	88540830	8553170	3	293,36,229,	0,1204,118776,
#Partially deleted in new
chr5	88540846	88684805	chr5:88540846-88684805	0	-	88540846	88540846	8553170	4	277,36,50,148,	0,1188,130189,143811,
#Partially deleted in new
chr5	88540883	88684825	chr5:88540883-88684825	0	-	88540883	88540883	789624	5	240,36,50,64,168,	0,1151,130152,132081,143774,
#Deleted in new
chr5	88602779	88603117	chr5:88602779-88603117	7	+	88602779	88602779	16724991	1	338,	0,
#Deleted in new
chr5	88664444	88673339	chr5:88664444-88673339	1	-	88664444	88664444	789624	4	3147,50,126,58,	0,6591,8520,8837,
#Deleted in new
chr5	88664444	88673325	chr5:88664444-88673325	2	-	88664444	88664444	789624	3	3147,50,361,	0,6591,8520,
#Deleted in new
chr5	88664445	88684936	chr5:88664445-88684936	1	-	88664445	88664445	789624	4	3146,50,64,279,	0,6590,8519,20212,
#Deleted in new
chr5	88666319	88676298	chr5:88666319-88676298	1	-	88666319	88666319	8553170	4	1272,50,126,852,	0,4716,6645,9127,
#Deleted in new
chr5	88666852	88666939	chr5:88666852-88666939	3	-	88666852	88666852	5263520	1	87,	0,
#Deleted in new
chr5	88666878	88684770	chr5:88666878-88684770	0	-	88666878	88666878	8553170	3	713,50,113,	0,4157,17779,
#Deleted in new
chr5	88666953	88672696	chr5:88666953-88672696	0	-	88666953	88666953	8553170	3	638,50,31,	0,4082,5712,
#Deleted in new
chr5	88667273	88678448	chr5:88667273-88678448	0	-	88667273	88667273	789624	4	318,50,64,101,	0,3762,5691,11074,
#Deleted in new
chr5	88667341	88691041	chr5:88667341-88691041	0	-	88667341	88667341	8553170	4	250,50,126,129,	0,3694,5623,23571,
#Deleted in new
chr5	88667352	88684823	chr5:88667352-88684823	0	-	88667352	88667352	8553170	4	239,50,126,166,	0,3683,5612,17305,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	88676217	88722831	chr5:88676217-88722831	3	+	88676217	88676217	789624	4	46,134,75,208,	0,29305,36573,46406,
#Deleted in new
chr5	88692644	88693972	chr5:88692644-88693972	3	-	88692644	88692644	8553170	2	250,426,	0,902,
#Deleted in new
chr5	88692650	88692859	chr5:88692650-88692859	3	+	88692650	88692650	8553170	2	49,33,	0,176,
#Partially deleted in new
chr5	88717116	88883464	chr5:88717116-88883464	1	-	88722603	88823788	789624	11	5809,136,130,24,173,48,187,144,204,196,510,	0,11376,12101,13094,14612,31953,34740,44068,87481,106618,165838,
#Partially deleted in new
chr5	88718240	88904053	chr5:88718240-88904053	1	-	88722603	88823788	789624	12	4685,136,130,173,48,187,138,60,204,196,97,138,	0,10252,10977,13488,30829,33616,42747,43028,86357,105494,169261,185675,
#Partially deleted in new
chr5	88718240	88904257	chr5:88718240-88904257	3	-	88722603	88823788	789624	11	4685,136,130,173,48,187,138,204,196,97,342,	0,10252,10977,13488,30829,33616,42747,86357,105494,169261,185675,
#Partially deleted in new
chr5	88718273	88883747	chr5:88718273-88883747	1	-	88722603	88823788	789624	12	4556,136,130,24,173,48,187,144,204,193,45,96,	0,10219,10944,11937,13455,30796,33583,42911,86324,105461,164681,165378,
#Partially deleted in new
chr5	88718273	88883184	chr5:88718273-88883184	1	-	88722603	88823788	789624	10	4652,136,130,173,48,178,144,204,193,230,	0,10219,10944,13455,30796,33592,42911,86324,105461,164681,
#Partially deleted in new
chr5	88720025	88904052	chr5:88720025-88904052	1	-	88722603	88823788	789624	11	2900,136,130,173,48,187,138,204,193,97,137,	0,8467,9192,11703,29044,31831,40962,84572,103709,167476,183890,
#Partially deleted in new
chr5	88720336	88883466	chr5:88720336-88883466	1	-	88722603	88823788	789624	11	2589,136,130,24,173,48,187,144,204,193,512,	0,8156,8881,9874,11392,28733,31520,40848,84261,103398,162618,
#Partially deleted in new
chr5	88720824	88825864	chr5:88720824-88825864	1	-	88722603	88823788	789624	11	2005,136,130,24,173,48,187,144,204,196,146,	0,7668,8393,9386,10904,28245,31032,40360,83773,102910,104894,
#Partially deleted in new
chr5	88720824	88825848	chr5:88720824-88825848	1	-	88722603	88823788	789624	11	2101,136,130,24,173,48,187,138,204,196,130,	0,7668,8393,9386,10904,28245,31032,40163,83773,102910,104894,
#Partially deleted in new
chr5	88720828	88883184	chr5:88720828-88883184	1	-	88722603	88823788	789624	10	2001,136,130,173,48,187,144,204,193,230,	0,7664,8389,10900,28241,31028,40356,83769,102906,162126,
#Partially deleted in new
chr5	88720843	88883172	chr5:88720843-88883172	1	-	88722752	88823788	789624	11	2009,136,130,24,173,48,187,144,204,196,218,	0,7649,8374,9367,10885,28226,31013,40341,83754,102891,162111,
#Partially deleted in new
chr5	88720855	88883182	chr5:88720855-88883182	1	-	88722603	88823788	789624	11	1974,136,130,24,173,48,187,144,204,193,134,	0,7637,8362,9355,10873,28214,31001,40329,83742,102879,162193,
#Partially deleted in new
chr5	88721569	88883224	chr5:88721569-88883224	1	-	88722603	88823788	789624	11	1260,136,130,24,173,48,187,144,204,196,270,	0,6923,7648,8641,10159,27500,30287,39615,83028,102165,161385,
#Partially deleted in new
chr5	88721576	88904105	chr5:88721576-88904105	1	-	88722603	88823788	789624	11	1349,136,130,173,48,187,144,204,193,97,190,	0,6916,7641,10152,27493,30280,39608,83021,102158,165925,182339,
#Partially deleted in new
chr5	88721619	88761912	chr5:88721619-88761912	0	-	88721619	88721619	8553170	9	1210,136,130,24,173,48,187,144,195,	0,6873,7598,8591,10109,27450,30237,39565,40098,
#Partially deleted in new
chr5	88721646	88877999	chr5:88721646-88877999	1	-	88722603	88823788	789624	11	1279,136,130,24,173,48,187,144,204,193,58,	0,6846,7571,8564,10082,27423,30210,39538,82951,102088,156295,
#Partially deleted in new
chr5	88721924	88904097	chr5:88721924-88904097	1	-	88722603	88823788	789624	11	905,136,130,173,48,187,138,204,193,97,182,	0,6568,7293,9804,27145,29932,39063,82673,101810,165577,181991,
#Partially deleted in new
chr5	88722488	88883181	chr5:88722488-88883181	1	-	88722603	88823788	789624	10	437,136,130,173,48,187,144,204,196,227,	0,6004,6729,9240,26581,29368,38696,82109,101246,160466,
#Deleted in new
chr5	88722494	88731827	chr5:88722494-88731827	0	-	88722760	88731827	789624	5	333,136,130,24,99,	0,5998,6723,7716,9234,
#Partially deleted in new
chr5	88722497	88749115	chr5:88722497-88749115	0	-	88722760	88749115	789624	5	330,136,130,173,46,	0,5995,6720,9231,26572,
#Partially deleted in new
chr5	88722566	88785542	chr5:88722566-88785542	1	-	88722603	88761208	789624	9	299,136,130,24,173,48,187,144,204,	0,5926,6651,7644,9162,26503,29290,38618,62772,
#Partially deleted in new
chr5	88722603	88823788	chr5:88722603-88823788	1	-	88722603	88823788	789624	9	226,136,130,24,173,48,187,204,54,	0,5889,6614,7607,9125,26466,29253,81994,101131,
#Partially deleted in new
chr5	88722603	88823788	chr5:88722603-88823788	1	-	88722603	88823788	789624	8	322,136,130,173,48,187,204,54,	0,5889,6614,9125,26466,29253,81994,101131,
#Deleted in new
chr5	88722836	88729519	chr5:88722836-88729519	0	-	88722836	88722836	8553170	3	89,136,302,	0,5656,6381,
#Partially deleted in new
chr5	88731436	88749124	chr5:88731436-88749124	0	-	88731436	88731436	8553170	2	465,55,	0,17633,
#Partially deleted in new
chr5	88731804	88883147	chr5:88731804-88883147	0	-	88731804	88823788	789624	7	97,48,187,138,204,196,193,	0,17265,20052,29183,72793,91930,151150,
#Partially deleted in new
chr5	88731851	88824340	chr5:88731851-88824340	0	-	88731851	88823788	789624	7	50,48,187,138,204,196,31,	0,17218,20005,29136,72746,91883,92458,
#Partially deleted in new
chr5	88732471	88749097	chr5:88732471-88749097	0	-	88732471	88732471	8553170	2	72,28,	0,16598,
#Partially deleted in new
chr5	88749085	88827192	chr5:88749085-88827192	0	-	88749085	88823788	789624	6	32,187,138,204,196,157,	0,2771,11902,55512,74649,77950,
#Partially deleted in new
chr5	88751861	88825846	chr5:88751861-88825846	0	-	88751861	88823788	789624	5	182,144,204,193,128,	0,9323,52736,71873,73857,
#Partially deleted in new
chr5	88761022	88827158	chr5:88761022-88827158	0	-	88761022	88823788	789624	4	103,204,193,123,	0,43575,62712,66013,
#Partially deleted in new
chr5	88761199	88884568	chr5:88761199-88884568	0	-	88761199	88823788	789624	4	129,204,196,80,	0,43398,62535,123289,
#Partially deleted in new
chr5	88761208	88877977	chr5:88761208-88877977	0	-	88761208	88823788	789624	4	120,204,193,40,	0,43389,62526,116729,
#Partially deleted in new
chr5	88761216	88824295	chr5:88761216-88824295	0	-	88761216	88823788	789624	4	112,204,193,18,	0,43381,62518,63061,
#Partially deleted in new
chr5	88761268	88771858	chr5:88761268-88771858	0	-	88761268	88761268	8553170	2	60,80,	0,10510,
#Partially deleted in new
chr5	88761309	88772346	chr5:88761309-88772346	0	-	88761309	88761309	8553170	2	19,81,	0,10956,
#Partially deleted in new
chr5	88761324	88883227	chr5:88761324-88883227	0	-	88761324	88823788	789624	5	4,204,193,99,273,	0,43273,62410,119599,121630,
#Partially deleted in new
chr5	88771788	88804619	chr5:88771788-88804619	0	-	88771788	88771788	8553170	2	78,22,	0,32809,
#Partially deleted in new
chr5	88771972	88804669	chr5:88771972-88804669	0	-	88771972	88771972	8553170	2	28,72,	0,32625,
#Partially deleted in new
chr5	88772281	88804617	chr5:88772281-88804617	0	-	88772281	88772281	8553170	2	80,20,	0,32316,
#Partially deleted in new
chr5	88804525	88883174	chr5:88804525-88883174	0	-	88804525	88804525	8553170	3	276,193,220,	0,19209,78429,
#Partially deleted in new
chr5	88804753	88823784	chr5:88804753-88823784	0	-	88804753	88823784	789624	3	48,27,50,	0,13051,18981,
#Partially deleted in new
chr5	88804769	88824275	chr5:88804769-88824275	0	-	88804769	88823788	789624	2	32,541,	0,18965,
#Partially deleted in new
chr5	88823795	88889324	chr5:88823795-88889324	0	-	88823795	88823795	8553170	3	132,97,274,	0,63706,65255,
#Partially deleted in new
chr5	88823860	88883224	chr5:88823860-88883224	0	-	88823860	88823860	8553170	3	67,245,270,	0,15518,59094,
#Deleted in new
chr5	88823862	88824914	chr5:88823862-88824914	0	-	88823862	88823862	8553170	2	65,35,	0,1017,
#Partially deleted in new
chr5	88823900	88839309	chr5:88823900-88839309	0	-	88823900	88823900	8553170	2	30,70,	0,15339,
#Deleted in new
chr5	88877962	88882996	chr5:88877962-88882996	0	-	88877962	88877962	8553170	2	58,42,	0,4992,
#Deleted in new
chr5	88880843	88881264	chr5:88880843-88881264	0	-	88880843	88880843	8553170	1	421,	0,
#Deleted in new
chr5	88880981	88889299	chr5:88880981-88889299	0	-	88880981	88880981	8553170	4	41,45,97,249,	0,1973,6520,8069,
#Deleted in new
chr5	88882959	88884387	chr5:88882959-88884387	0	-	88882959	88882959	8553170	2	40,60,	0,1368,
#Partially deleted in new
chr5	88883327	89032293	chr5:88883327-89032293	1	+	88883327	88883327	789624	4	158,62,72,536,	0,21881,22374,148430,
#Partially deleted in new
chr5	88883398	88944993	chr5:88883398-88944993	1	+	88883398	88883398	8553170	4	87,223,62,1978,	0,20539,21810,59617,
#Partially deleted in new
chr5	88883416	89305171	chr5:88883416-89305171	1	+	88883416	88883416	8553170	6	69,62,71,63,54,422,	0,21792,211542,267116,267307,421333,
#Deleted in new
chr5	88884355	88887590	chr5:88884355-88887590	0	-	88884355	88884355	8553170	2	71,89,	0,3146,
#Partially deleted in new
chr5	88887391	88904052	chr5:88887391-88904052	0	-	88887391	88887391	8553170	2	207,137,	0,16524,
#Deleted in new
chr5	88887542	88888932	chr5:88887542-88888932	0	-	88887542	88887542	8553170	2	56,44,	0,1346,
#Deleted in new
chr5	88887564	88888232	chr5:88887564-88888232	0	-	88887564	88887564	8553170	2	34,66,	0,602,
#Deleted in new
chr5	88887584	88888964	chr5:88887584-88888964	0	-	88887584	88887584	8553170	2	14,86,	0,1294,
#Partially deleted in new
chr5	88889307	88943343	chr5:88889307-88943343	0	+	88889307	88889307	8553170	3	173,62,328,	0,15901,53708,
#Partially deleted in new
chr5	88889334	88967279	chr5:88889334-88967279	1	+	88889334	88889334	789624	4	146,62,107,1439,	0,15874,53681,76506,
#Partially deleted in new
chr5	88889373	88965872	chr5:88889373-88965872	1	+	88889373	88889373	8553170	5	107,62,107,80,32,	0,15835,53642,58762,76467,
#Partially deleted in new
chr5	88889444	89465982	chr5:88889444-89465982	3	+	88889444	88889444	789624	7	36,62,75,71,80,110,67,	0,15764,76396,205514,487838,576221,576471,
#Partially deleted in new
chr5	88889450	88905270	chr5:88889450-88905270	0	+	88889450	88889450	8553170	3	30,266,62,	0,14487,15758,
#Partially deleted in new
chr5	88889453	88943298	chr5:88889453-88943298	1	+	88889453	88889453	8553170	4	27,111,62,283,	0,2713,15755,53562,
#Partially deleted in new
chr5	88889459	88941370	chr5:88889459-88941370	1	+	88889459	88889459	789624	4	21,62,72,558,	0,15749,16242,51353,
#Partially deleted in new
chr5	88892256	88965896	chr5:88892256-88965896	0	+	88892256	88892256	8553170	4	21,223,62,56,	0,11681,12952,73584,
#Deleted in new
chr5	88904700	88906065	chr5:88904700-88906065	0	+	88904700	88904700	8553170	3	116,62,364,	0,508,1001,
#Partially deleted in new
chr5	88943086	89075331	chr5:88943086-89075331	0	+	88943086	88943086	8553170	4	36,80,75,236,	0,5049,22754,132009,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	88965874	89168668	chr5:88965874-89168668	0	+	88965874	88965874	8553170	4	41,71,63,419,	0,129084,184658,202375,
#Partially deleted in new
chr5	89581208	89677701	chr5:89581208-89677701	3	+	89581208	89581208	8553170	2	168,252,	0,96241,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	89900663	89904908	chr5:89900663-89904908	3	+	89900663	89900663	8553170	2	538,46,	0,4199,
#Partially deleted in new
chr5	89944909	89947573	chr5:89944909-89947573	3	+	89944909	89944909	8553170	2	76,494,	0,2170,
#Deleted in new
chr5	90016620	90016720	chr5:90016620-90016720	3	-	90016620	90016620	5263520	1	100,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	90158338	90289938	chr5:90158338-90289938	3	-	90158338	90158338	789624	6	181,61,62,41,52,43,	0,2190,42128,102207,103329,131557,
#Deleted in new
chr5	90158355	90160633	chr5:90158355-90160633	0	-	90158355	90158355	8553170	2	164,105,	0,2173,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	90159988	90289981	chr5:90159988-90289981	0	-	90159988	90159988	8553170	5	135,61,41,52,86,	0,540,100557,101679,129907,
#Deleted in new
chr5	90388467	90389363	chr5:90388467-90389363	3	-	90388467	90388467	8553170	1	896,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	90392260	90409786	chr5:90392260-90409786	3	-	90394063	90409661	789624	5	1847,192,115,136,142,	0,7097,13424,15438,17384,
#Partially deleted in new
chr5	90393709	90409757	chr5:90393709-90409757	1	-	90394063	90409661	789624	6	398,72,192,115,136,113,	0,2783,5648,11975,13989,15935,
#Partially deleted in new
chr5	90393858	90409732	chr5:90393858-90409732	1	-	90394063	90409661	789624	6	249,72,78,115,136,88,	0,2634,5613,11826,13840,15786,
#Partially deleted in new
chr5	90393932	90407830	chr5:90393932-90407830	0	-	90399546	90407830	789624	4	175,192,111,132,	0,5425,11756,13766,
#Partially deleted in new
chr5	90399046	90409757	chr5:90399046-90409757	1	-	90399346	90409661	789624	4	503,115,136,113,	0,6638,8652,10598,
#Deleted in new
chr5	90405393	90409766	chr5:90405393-90409766	1	-	90405616	90409661	789624	3	406,136,122,	0,2305,4251,
#Deleted in new
chr5	90409999	90410666	chr5:90409999-90410666	0	+	90409999	90409999	8553170	1	667,	0,
#Deleted in new
chr5	90410032	90410669	chr5:90410032-90410669	3	+	90410032	90410032	789624	2	272,170,	0,467,
#Partially deleted in new
chr5	90458202	90474768	chr5:90458202-90474768	3	-	90461166	90474292	789624	2	3350,930,	0,15636,
#Partially deleted in new
chr5	90471747	90485684	chr5:90471747-90485684	0	+	90485567	90485684	789624	2	179,160,	0,13777,
#Deleted in new
chr5	90472442	90474378	chr5:90472442-90474378	1	-	90473692	90474292	789624	1	1936,	0,
#Partially deleted in new
chr5	90474058	90495707	chr5:90474058-90495707	0	+	90485567	90495707	789624	4	260,160,130,31,	0,11466,13941,21618,
#Partially deleted in new
chr5	90474260	90512129	chr5:90474260-90512129	0	+	90485567	90512129	789624	8	58,160,130,57,51,83,147,77,	0,11264,13739,21416,23395,27645,32267,37792,
#Partially deleted in new
chr5	90474863	90514552	chr5:90474863-90514552	3	+	90485567	90512139	789624	8	157,160,130,57,51,83,147,2500,	0,10661,13136,20813,22792,27042,31664,37189,
#Partially deleted in new
chr5	90474863	90497734	chr5:90474863-90497734	0	+	90485567	90497734	789624	5	157,160,130,57,79,	0,10661,13136,20813,22792,
#Partially deleted in new
chr5	90474888	90514553	chr5:90474888-90514553	1	+	90485567	90512139	789624	8	132,150,130,57,51,83,147,2501,	0,10646,13111,20788,22767,27017,31639,37164,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	90474894	90490858	chr5:90474894-90490858	1	+	90485567	90490648	789624	4	126,160,130,266,	0,10630,13105,15698,
#Partially deleted in new
chr5	90515610	90529561	chr5:90515610-90529561	1	-	90518811	90525289	789624	4	3399,266,84,114,	0,9424,11308,13837,
#Partially deleted in new
chr5	90515625	90529581	chr5:90515625-90529581	3	-	90518818	90525289	789624	3	3859,266,134,	0,9409,13822,
#Partially deleted in new
chr5	90518290	90529584	chr5:90518290-90529584	1	-	90519296	90525289	789624	3	1135,266,137,	0,6744,11157,
#Partially deleted in new
chr5	90519432	90529584	chr5:90519432-90529584	0	-	90520443	90525289	789624	4	52,98,266,137,	0,931,5602,10015,
#Partially deleted in new
chr5	90529343	90622671	chr5:90529343-90622671	0	+	90529481	90622671	789624	4	172,185,150,75,	0,85491,88460,93253,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	90558685	90626582	chr5:90558685-90626582	0	+	90558685	90558685	8553170	6	232,185,150,96,105,1453,	0,56149,59118,60400,63911,66444,
#Partially deleted in new
chr5	90558799	91164437	chr5:90558799-91164437	3	+	90558895	91163900	789624	90	118,185,150,96,105,114,566,271,330,177,224,127,186,181,164,124,267,127,218,744,374,177,181,203,130,81,140,610,216,216,245,182,812,210,131,100,180,164,94,79,139,142,263,176,125,158,147,108,265,123,220,205,147,256,203,177,183,180,165,118,124,139,183,233,149,202,220,240,150,474,144,175,136,1106,118,172,243,408,185,250,140,161,101,117,179,158,122,192,178,656,	0,56035,59004,60286,63797,66330,68411,69762,70410,76314,78925,83836,84056,85003,85906,87168,88698,92804,93546,94409,99105,113746,115254,116443,117280,120749,122515,124786,126980,131061,131997,133805,135090,138137,144865,145589,146600,147431,150016,152181,152384,153487,157667,161248,162135,166032,166286,166749,169869,170842,186246,186791,191751,194774,196183,197654,198179,200609,204505,215386,217653,219105,219627,220065,222630,224324,225038,229271,230902,232073,243939,246484,248802,251433,256819,264625,270144,281778,289837,294484,295262,296941,304957,406615,426544,513647,543419,591230,594421,604982,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	90558799	90630510	chr5:90558799-90630510	0	+	90558799	90558799	8553170	9	118,185,150,96,105,114,566,271,1301,	0,56035,59004,60286,63797,66330,68411,69762,70410,
#Partially deleted in new
chr5	90558799	91164216	chr5:90558799-91164216	1	+	90558895	91163900	789624	90	118,185,150,96,105,114,566,271,330,177,224,127,186,181,164,124,267,127,218,744,374,177,181,203,130,81,140,610,216,216,245,182,812,210,131,100,180,164,94,79,139,142,263,176,125,158,147,108,265,123,220,205,147,256,203,177,183,180,165,118,124,139,183,233,149,202,220,240,150,474,144,175,136,1106,118,172,243,408,185,250,140,161,101,117,179,158,122,192,178,435,	0,56035,59004,60286,63797,66330,68411,69762,70410,76314,78925,83836,84056,85003,85906,87168,88698,92804,93546,94409,99105,113746,115254,116443,117280,120749,122515,124786,126980,131061,131997,133805,135090,138137,144865,145589,146600,147431,150016,152181,152384,153487,157667,161248,162135,166032,166286,166749,169869,170842,186246,186791,191751,194774,196183,197654,198179,200609,204505,215386,217653,219105,219627,220065,222630,224324,225038,229271,230902,232073,243939,246484,248802,251433,256819,264625,270144,281778,289837,294484,295262,296941,304957,406615,426544,513647,543419,591230,594421,604982,
#Partially deleted in new
chr5	90558836	90627945	chr5:90558836-90627945	0	+	90558836	90558836	8553170	7	81,185,150,96,105,114,735,	0,55998,58967,60249,63760,66293,68374,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	90617189	90625473	chr5:90617189-90625473	0	+	90617189	90617189	8553170	4	764,96,105,344,	0,1896,5407,7940,
#Partially deleted in new
chr5	90617891	90629072	chr5:90617891-90629072	0	+	90617891	90617891	8553170	6	62,96,105,114,566,511,	0,1194,4705,7238,9319,10670,
#Partially deleted in new
chr5	90627772	90655855	chr5:90627772-90655855	0	+	90627772	90627772	8553170	14	4,271,330,177,224,127,186,181,164,124,267,127,218,2647,	0,789,1437,7341,9952,14863,15083,16030,16933,18195,19725,23831,24573,25436,
#Partially deleted in new
chr5	90640717	90708909	chr5:90640717-90708909	0	+	90643946	90708909	789624	29	151,127,186,181,164,124,267,127,218,732,374,177,181,203,130,81,140,610,216,216,245,182,812,210,131,100,180,164,94,	0,1918,2138,3085,3988,5250,6780,10886,11628,12503,17187,31828,33336,34525,35362,38831,40597,42868,45062,49143,50079,51887,53172,56219,62947,63671,64682,65513,68098,
#Partially deleted in new
chr5	90642890	90674642	chr5:90642890-90674642	0	+	90642890	90642890	8553170	11	151,181,164,124,267,127,218,744,374,177,589,	0,912,1815,3077,4607,8713,9455,10318,15014,29655,31163,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr5	90658067	90718431	chr5:90658067-90718431	0	+	90658067	90658067	8553170	23	211,177,181,203,130,81,140,610,216,216,245,182,812,210,131,100,180,164,94,79,139,142,1965,	0,14478,15986,17175,18012,21481,23247,25518,27712,31793,32729,34537,35822,38869,45597,46321,47332,48163,50748,52913,53116,54219,58399,
#Partially deleted in new
chr5	90672553	90676859	chr5:90672553-90676859	0	+	90672553	90672850	789624	6	169,95,181,203,130,101,	0,249,1500,2689,3526,4205,
#Partially deleted in new
chr5	90675310	91102227	chr5:90675310-91102227	0	+	90675310	90985378	789624	5	135,130,179,158,9,	0,769,310033,397136,426908,
#Partially deleted in new
chr5	90675317	90725130	chr5:90675317-90725130	0	+	90675317	90692627	789624	24	128,130,78,140,610,216,216,162,182,812,210,131,100,180,164,94,79,139,142,263,176,125,158,45,	0,762,4234,5997,8268,10462,14543,15479,17287,18572,21619,28347,29071,30082,30913,33498,35663,35866,36969,41149,44730,45617,49514,49768,
#Partially deleted in new
chr5	90679605	90716716	chr5:90679605-90716716	0	+	90679605	90685812	789624	17	24,140,216,216,162,182,812,210,131,100,180,164,94,79,139,142,250,	0,1709,6174,10255,11191,12999,14284,17331,24059,24783,25794,26625,29210,31375,31578,32681,36861,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr5	90690946	90759902	chr5:90690946-90759902	0	+	90690946	90690946	8553170	27	95,182,812,210,131,100,180,164,94,79,139,142,263,176,125,158,147,108,265,123,220,205,147,256,203,183,494,	0,1658,2943,5990,12718,13442,14453,15284,17869,20034,20237,21340,25520,29101,29988,33885,34139,34602,37722,38695,54099,54644,59604,62627,64036,66032,68462,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr5	90694059	90759982	chr5:90694059-90759982	0	+	90694059	90694059	8553170	26	642,210,131,100,180,164,94,79,139,142,263,176,125,158,147,108,265,123,220,205,147,256,203,177,183,574,	0,2877,9605,10329,11340,12171,14756,16921,17124,18227,22407,25988,26875,30772,31026,31489,34609,35582,50986,51531,56491,59514,60923,62394,62919,65349,
#Partially deleted in new
chr5	90720181	90780101	chr5:90720181-90780101	0	+	90720181	90720181	8553170	21	42,125,158,147,108,265,123,220,205,147,256,203,177,183,180,165,118,124,139,183,1237,	0,753,4650,4904,5367,8487,9460,24864,25409,30369,33392,34801,36272,36797,39227,43123,54004,56271,57723,58245,58683,
#Partially deleted in new
chr5	90745690	91164166	chr5:90745690-91164166	0	+	90745690	91163900	789624	38	105,147,256,203,183,180,165,118,124,139,183,233,149,202,220,240,150,474,144,175,136,1106,118,172,243,408,185,250,140,161,101,117,179,158,122,192,178,385,	0,4860,7883,9292,11288,13718,17614,28495,30762,32214,32736,33174,35739,37433,38147,42380,44011,45182,57048,59593,61911,64542,69928,77734,83253,94887,102946,107593,108371,110050,118066,219724,239653,326756,356528,404339,407530,418091,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	90756567	90759991	chr5:90756567-90759991	0	+	90756567	90756567	8553170	2	594,583,	0,2841,
#Partially deleted in new
chr5	90762607	90778543	chr5:90762607-90778543	0	+	90762607	90762607	8553170	5	862,118,124,139,117,	0,11578,13845,15297,15819,
#Partially deleted in new
chr5	90781080	91164215	chr5:90781080-91164215	0	+	90781080	90781080	8553170	26	498,202,220,240,150,474,144,175,136,1106,118,172,243,408,185,250,140,161,101,117,179,158,122,192,178,434,	0,2043,2757,6990,8621,9792,21658,24203,26521,29152,34538,42344,47863,59497,67556,72203,72981,74660,82676,184334,204263,291366,321138,368949,372140,382701,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	90783263	90792667	chr5:90783263-90792667	0	+	90783263	90791373	789624	5	62,220,240,150,1795,	0,574,4807,6438,7609,
#Partially deleted in new
chr5	90783994	91164203	chr5:90783994-91164203	0	+	90783994	90825853	789624	25	63,240,150,474,144,175,136,1106,118,172,39,243,408,185,250,140,161,101,117,179,158,122,192,178,422,	0,4076,5707,6878,18744,21289,23607,26238,31624,39430,41820,44949,56583,64642,69289,70067,71746,79762,181420,201349,288452,318224,366035,369226,379787,
#Partially deleted in new
chr5	90791063	90810436	chr5:90791063-90810436	0	+	90791063	90791063	8553170	3	283,144,204,	0,11675,19169,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	90791154	90793286	chr5:90791154-90793286	0	+	90791154	90792810	789624	2	192,506,	0,1626,
#Partially deleted in new
chr5	90804926	90807665	chr5:90804926-90807665	0	+	90804926	90804926	8553170	2	532,64,	0,2675,
#Partially deleted in new
chr5	90840945	91164200	chr5:90840945-91164200	0	+	90840945	90850701	789624	14	40,185,191,250,140,161,101,117,179,158,122,192,178,419,	0,7691,9740,12338,13116,14795,22811,124469,144398,231501,261273,309084,312275,322836,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	90846389	90853447	chr5:90846389-90853447	0	+	90846389	90846389	8553170	3	210,185,164,	0,2247,6894,
#Partially deleted in new
chr5	90899182	91164216	chr5:90899182-91164216	1	+	90965474	91163900	789624	8	141,117,179,158,122,192,178,435,	0,66232,86161,173264,203036,250847,254038,264599,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	90929526	91072579	chr5:90929526-91072579	0	+	90965474	91072579	789624	4	135,117,179,133,	0,35888,55817,142920,
#Partially deleted in new
chr5	90931149	91072581	chr5:90931149-91072581	0	+	90965474	91072581	789624	4	69,117,179,135,	0,34265,54194,141297,
#Deleted in new
chr5	91030989	91031307	chr5:91030989-91031307	7	-	91030989	91030989	16724991	1	318,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	91054833	91203446	chr5:91054833-91203446	1	-	91054833	91054833	8553170	3	2021,90,65,	0,147777,148548,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	91091614	91164212	chr5:91091614-91164212	0	+	91091614	91091614	8553170	5	178,122,192,178,431,	0,10604,58415,61606,72167,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	91091614	91164207	chr5:91091614-91164207	0	+	91091614	91091614	8553170	4	178,122,178,426,	0,10604,61606,72167,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	91091616	91164226	chr5:91091616-91164226	0	+	91091616	91091616	8553170	6	176,54,122,192,178,445,	0,1003,10602,58413,61604,72165,
#Partially deleted in new
chr5	91132302	91142470	chr5:91132302-91142470	3	-	91132302	91132302	8553170	3	468,67,152,	0,3625,10016,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	91220738	91245003	chr5:91220738-91245003	0	-	91220738	91220738	8553170	3	547,62,184,	0,22202,24081,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	91223418	91223967	chr5:91223418-91223967	3	+	91223418	91223418	8553170	1	549,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	91226474	91227071	chr5:91226474-91227071	3	-	91226474	91226474	8553170	1	597,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	91231285	91244935	chr5:91231285-91244935	0	-	91231285	91231285	8553170	3	426,62,116,	0,11655,13534,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	91270726	91270867	chr5:91270726-91270867	3	+	91270726	91270726	8553170	1	141,	0,
#Partially deleted in new
chr5	91280096	91281142	chr5:91280096-91281142	3	-	91280096	91280096	8553170	1	1046,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	91283910	91314386	chr5:91283910-91314386	1	-	91283910	91283910	8553170	4	2696,140,165,55,	0,29727,30169,30421,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	91285159	91314516	chr5:91285159-91314516	1	-	91285159	91285159	8553170	3	1447,140,437,	0,28478,28920,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	91301903	91314402	chr5:91301903-91314402	0	-	91301903	91301903	789624	5	1258,99,152,140,323,	0,1969,11174,11734,12176,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	91301910	91314375	chr5:91301910-91314375	0	-	91301910	91301910	8553170	3	1251,140,296,	0,11727,12169,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	91302077	91314402	chr5:91302077-91314402	2	-	91302077	91302077	8553170	4	1084,99,83,71,	0,1795,12087,12254,
#Partially deleted in new
chr5	91302730	91314430	chr5:91302730-91314430	0	-	91302730	91302730	8553170	3	431,99,351,	0,1142,11349,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	91302730	91314402	chr5:91302730-91314402	1	-	91302730	91302730	8553170	10	431,99,92,65,295,201,152,140,165,71,	0,1142,2949,3301,8007,9564,10347,10907,11349,11601,
#Partially deleted in new
chr5	91302732	91313181	chr5:91302732-91313181	0	-	91302732	91302732	8553170	6	429,99,92,92,119,104,	0,1140,2947,8913,9562,10345,
#Partially deleted in new
chr5	91302795	91311880	chr5:91302795-91311880	0	-	91302795	91302795	8553170	2	366,235,	0,8850,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	91303330	91314439	chr5:91303330-91314439	0	-	91303330	91303330	8553170	3	101,165,108,	0,10749,11001,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	91307617	91314547	chr5:91307617-91314547	0	-	91307617	91307617	8553170	2	771,456,	0,6474,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	91307678	91312375	chr5:91307678-91312375	1	-	91307678	91307678	8553170	3	710,289,81,	0,3065,4616,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	91309712	91314375	chr5:91309712-91314375	0	-	91309712	91309712	8553170	2	621,296,	0,4367,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	91310613	91314402	chr5:91310613-91314402	0	-	91310613	91310613	789624	4	419,140,168,71,	0,3024,3466,3718,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	91310626	91314402	chr5:91310626-91314402	0	-	91310626	91310626	8553170	3	2603,140,323,	0,3011,3453,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	91310626	91314404	chr5:91310626-91314404	0	-	91310626	91310626	8553170	5	406,119,152,140,443,	0,1668,2451,3011,3335,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	91310626	91313675	chr5:91310626-91313675	0	-	91310626	91310626	8553170	3	1787,152,38,	0,2451,3011,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	91310626	91314402	chr5:91310626-91314402	1	-	91310626	91310626	8553170	7	406,119,152,140,72,83,71,	0,1668,2451,3011,3335,3538,3705,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	91310626	91314402	chr5:91310626-91314402	0	-	91310626	91310626	8553170	5	406,201,152,140,323,	0,1668,2451,3011,3453,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	91310626	91313675	chr5:91310626-91313675	0	-	91310626	91310626	8553170	3	1869,152,38,	0,2451,3011,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	91310626	91314386	chr5:91310626-91314386	0	-	91310626	91310626	8553170	6	406,201,152,140,91,222,	0,1668,2451,3011,3335,3538,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	91310626	91314502	chr5:91310626-91314502	0	-	91310626	91310626	8553170	3	406,140,423,	0,3011,3453,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	91310640	91314402	chr5:91310640-91314402	0	-	91310640	91310640	8553170	5	392,119,152,144,238,	0,1654,2437,2997,3524,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	91310640	91314402	chr5:91310640-91314402	0	-	91310640	91310640	8553170	4	392,152,140,323,	0,2437,2997,3439,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	91310640	91314402	chr5:91310640-91314402	0	-	91310640	91310640	8553170	6	392,92,201,152,140,323,	0,1005,1654,2437,2997,3439,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	91310640	91313675	chr5:91310640-91313675	1	-	91310640	91310640	8553170	4	392,92,935,38,	0,1005,1654,2997,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	91310640	91314384	chr5:91310640-91314384	0	-	91310640	91310640	8553170	5	392,768,152,140,305,	0,1005,2437,2997,3439,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	91314715	91314997	chr5:91314715-91314997	3	-	91314715	91314715	8553170	1	282,	0,
#Deleted in new
chr5	91354477	91354934	chr5:91354477-91354934	7	+	91354477	91354477	16724991	1	457,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	91355379	91356026	chr5:91355379-91356026	3	+	91355379	91355379	8553170	1	647,	0,
#Partially deleted in new
chr5	91368723	91383359	chr5:91368723-91383359	3	-	91371399	91383092	0	8	2733,155,163,257,103,148,82,547,	0,4960,5390,6198,6787,7897,9970,14089,
#Partially deleted in new
chr5	91370797	91373845	chr5:91370797-91373845	0	-	91370797	91370797	8553170	2	659,162,	0,2886,
#Partially deleted in new
chr5	91374224	91375344	chr5:91374224-91375344	0	-	91374224	91374224	8553170	2	52,423,	0,697,
#Partially deleted in new
chr5	91374999	91380089	chr5:91374999-91380089	0	-	91374999	91374999	8553170	4	179,103,82,167,	0,511,3694,4923,
#Partially deleted in new
chr5	91375520	91381020	chr5:91375520-91381020	0	-	91375520	91375520	8553170	4	93,148,82,241,	0,1100,3173,5259,
#Partially deleted in new
chr5	91375526	91380151	chr5:91375526-91380151	0	-	91375526	91375526	8553170	4	87,148,82,270,	0,1094,3167,4355,
#Partially deleted in new
chr5	91376558	91382875	chr5:91376558-91382875	0	-	91376558	91376558	8553170	3	210,82,63,	0,2135,6254,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	91380348	91420715	chr5:91380348-91420715	3	+	91380348	91380348	789624	3	576,63,1861,	0,38360,38506,
#Partially deleted in new
chr5	91380396	91439085	chr5:91380396-91439085	0	+	91380396	91380396	8553170	3	528,63,146,	0,38312,58543,
#Partially deleted in new
chr5	91380651	91422963	chr5:91380651-91422963	0	+	91380651	91380651	8553170	3	273,63,186,	0,38057,42126,
#Deleted in new
chr5	91476381	91477018	chr5:91476381-91477018	7	+	91476381	91476381	16724991	1	637,	0,
#Partially deleted in new
chr5	91843686	91844529	chr5:91843686-91844529	7	-	91843686	91843686	16724991	1	843,	0,
#Partially deleted in new
chr5	91844021	91844116	chr5:91844021-91844116	3	-	91844021	91844021	8553170	1	95,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	92199536	92406644	chr5:92199536-92406644	3	+	92199536	92199536	8553170	5	92,80,156,144,2485,	0,5068,105943,201381,204623,
#Deleted in new
chr5	92329229	92332584	chr5:92329229-92332584	3	+	92329229	92329229	8553170	2	142,136,	0,3219,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	92410255	92639497	chr5:92410255-92639497	3	-	92410255	92410255	8553170	4	106,118,235,52,	0,97092,149543,229190,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	92432202	92660863	chr5:92432202-92660863	1	-	92432202	92432202	8553170	3	87,118,134,	0,75145,228527,
#Partially deleted in new
chr5	92553442	92560033	chr5:92553442-92560033	0	-	92553442	92553442	8553170	2	29,235,	0,6356,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	92654847	92670734	chr5:92654847-92670734	3	+	92654847	92654847	8553170	2	89,863,	0,15024,
#Partially deleted in new
chr5	92669869	92679141	chr5:92669869-92679141	1	+	92669869	92669869	8553170	2	161,411,	0,8861,
#Partially deleted in new
chr5	92675955	92688254	chr5:92675955-92688254	3	-	92675955	92675955	8553170	2	595,135,	0,12164,
#Deleted in new
chr5	92840806	92841628	chr5:92840806-92841628	7	-	92840806	92840806	16724991	1	822,	0,
#Deleted in new
chr5	92889386	92890840	chr5:92889386-92890840	7	-	92889386	92889386	16724991	1	1454,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	92907179	92939591	chr5:92907179-92939591	3	-	92907179	92907179	8553170	4	289,167,130,121,	0,6539,6826,32291,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	93019662	93068669	chr5:93019662-93068669	3	-	93019662	93019662	8553170	3	474,107,44,	0,32007,48963,
#Deleted in new
chr5	93267428	93268425	chr5:93267428-93268425	7	+	93267428	93267428	16724991	1	997,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	93409358	93570793	chr5:93409358-93570793	1	-	93409358	93409358	8553170	5	2151,103,122,100,904,	0,144402,145515,154005,160531,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	93409808	93581219	chr5:93409808-93581219	1	-	93409808	93409808	789624	7	1701,39,121,103,122,100,78,	0,28894,134986,143952,145065,153555,171333,
#Partially deleted in new
chr5	93411017	93423242	chr5:93411017-93423242	0	-	93411017	93411017	8553170	2	492,88,	0,12137,
#Partially deleted in new
chr5	93411017	93438737	chr5:93411017-93438737	0	-	93411017	93411017	8553170	2	492,35,	0,27685,
#Partially deleted in new
chr5	93411020	93570819	chr5:93411020-93570819	1	-	93411020	93411020	789624	9	489,96,39,47,103,122,100,113,322,	0,21344,27682,85036,142740,143853,152343,158869,159477,
#Partially deleted in new
chr5	93411032	93422423	chr5:93411032-93422423	0	-	93411032	93411032	8553170	2	477,114,	0,11277,
#Partially deleted in new
chr5	93411288	93581007	chr5:93411288-93581007	0	-	93411288	93411288	8553170	3	221,100,541,	0,152075,169178,
#Partially deleted in new
chr5	93411401	93422413	chr5:93411401-93422413	0	-	93411401	93411401	8553170	2	108,163,	0,10849,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	93541871	93581297	chr5:93541871-93581297	3	-	93541871	93541871	789624	7	2153,121,103,122,100,113,156,	0,2923,11889,13002,21492,28018,39270,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	93541871	93581288	chr5:93541871-93581288	0	-	93541871	93541871	789624	6	2153,121,103,122,100,147,	0,2923,11889,13002,21492,39270,
#Partially deleted in new
chr5	93553752	93581055	chr5:93553752-93581055	0	-	93553752	93553752	8553170	4	111,122,100,589,	0,1121,9611,26714,
#Partially deleted in new
chr5	93553760	93585648	chr5:93553760-93585648	0	-	93553760	93553760	8553170	4	103,122,100,320,	0,1113,9603,31568,
#Deleted in new
chr5	93583223	93594611	chr5:93583223-93594611	3	+	93585023	93593842	0	3	2263,528,1050,	0,4693,10338,
#Deleted in new
chr5	93583336	93594615	chr5:93583336-93594615	1	+	93585023	93593842	0	3	2150,528,1054,	0,4580,10225,
#Deleted in new
chr5	93585023	93594072	chr5:93585023-93594072	1	+	93585023	93593842	789624	4	84,304,528,511,	0,159,2893,8538,
#Deleted in new
chr5	93585023	93593842	chr5:93585023-93593842	1	+	93585023	93593842	789624	4	84,226,528,281,	0,237,2893,8538,
#Deleted in new
chr5	93587100	93588333	chr5:93587100-93588333	0	+	93587100	93587100	8553170	2	143,417,	0,816,
#Deleted in new
chr5	93587459	93588388	chr5:93587459-93588388	0	+	93587459	93587459	8553170	2	112,472,	0,457,
#Deleted in new
chr5	93591972	93594143	chr5:93591972-93594143	0	+	93591972	93591972	8553170	2	214,582,	0,1589,
#Deleted in new
chr5	93600356	93603598	chr5:93600356-93603598	3	+	93600356	93600356	8553170	1	3242,	0,
#Partially deleted in new
chr5	93618068	94111635	chr5:93618068-94111635	3	-	93620986	94074751	789624	11	3061,85,117,120,219,192,66,101,102,124,125,	0,158090,166314,206079,263401,340708,346389,432662,435057,456577,493442,
#Partially deleted in new
chr5	93620690	94111648	chr5:93620690-94111648	1	-	93620986	94053195	789624	9	439,85,117,120,219,66,101,102,138,	0,155468,163692,203457,260779,343767,430040,432435,490820,
#Deleted in new
chr5	93620695	93620788	chr5:93620695-93620788	3	-	93620695	93620695	5263520	1	93,	0,
#Partially deleted in new
chr5	93620882	94074720	chr5:93620882-94074720	1	-	93620986	94053185	789624	8	247,85,117,120,219,66,102,75,	0,155276,163500,203265,260587,343575,432243,453763,
#Partially deleted in new
chr5	93620928	94111676	chr5:93620928-94111676	1	-	93620986	94053195	789624	10	201,85,117,120,219,192,66,101,102,166,	0,155230,163454,203219,260541,337848,343529,429802,432197,490582,
#Deleted in new
chr5	93682837	93683667	chr5:93682837-93683667	7	-	93682837	93682837	16724991	1	830,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	93733219	93741637	chr5:93733219-93741637	3	-	93740576	93741563	789624	1	8418,	0,
#Deleted in new
chr5	93741639	93743500	chr5:93741639-93743500	3	+	93741639	93741639	8553170	2	50,498,	0,1363,
#Partially deleted in new
chr5	93776157	93824254	chr5:93776157-93824254	0	-	93776157	93776157	8553170	3	86,117,107,	0,8225,47990,
#Partially deleted in new
chr5	93784194	93881601	chr5:93784194-93881601	0	-	93784194	93784194	8553170	3	305,120,132,	0,39953,97275,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	93860668	93863825	chr5:93860668-93863825	3	-	93860668	93860668	8553170	1	3157,	0,
#Partially deleted in new
chr5	93881310	94074771	chr5:93881310-94074771	0	-	93881310	93881310	8553170	6	378,192,66,101,102,126,	0,77466,83147,169420,171815,193335,
#Partially deleted in new
chr5	93910695	94074771	chr5:93910695-94074771	0	-	93910695	93910695	8553170	6	216,192,66,101,102,126,	0,48081,53762,140035,142430,163950,
#Partially deleted in new
chr5	94152965	94618571	chr5:94152965-94618571	3	-	94154006	94537126	789624	20	1159,95,159,160,409,225,165,140,111,183,191,151,266,228,95,162,670,169,132,72,	0,231402,233280,238569,243135,250603,264235,287016,299993,309421,311903,316995,318500,320326,324145,331803,367282,370964,384030,465534,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	94412973	94477184	chr5:94412973-94477184	0	-	94412973	94412973	8553170	9	4407,140,111,183,191,151,266,228,74,	0,27008,39985,49413,51895,56987,58492,60318,64137,
#Partially deleted in new
chr5	94519205	94618597	chr5:94519205-94618597	1	-	94520242	94537126	789624	5	1712,169,132,151,98,	0,4724,17790,63227,99294,
#Partially deleted in new
chr5	94567460	94568909	chr5:94567460-94568909	7	+	94567460	94567460	16724991	1	1449,	0,
#Partially deleted in new
chr5	94568928	94569470	chr5:94568928-94569470	7	-	94568928	94568928	16724991	1	542,	0,
#Partially deleted in new
chr5	94569539	94570676	chr5:94569539-94570676	7	+	94569539	94569539	16724991	1	1137,	0,
#Deleted in new
chr5	94592770	94594791	chr5:94592770-94594791	7	+	94592770	94592770	16724991	1	2021,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	94611905	94618122	chr5:94611905-94618122	3	-	94611905	94611905	8553170	3	32,146,231,	0,3644,5986,
#Partially deleted in new
chr5	94618346	94697621	chr5:94618346-94697621	3	+	94628810	94695312	789624	21	419,114,76,241,163,144,144,150,123,54,159,164,129,166,148,146,164,134,93,183,2791,	0,10464,10745,12156,24926,31107,33355,34925,36283,43951,45403,47514,51804,52496,60461,68226,70159,71126,73217,73727,76484,
#Partially deleted in new
chr5	94618677	94654751	chr5:94618677-94654751	0	+	94628810	94649562	789624	8	88,114,76,241,144,144,150,122,	0,10133,10414,11825,30776,33024,34594,35952,
#Partially deleted in new
chr5	94618684	94629720	chr5:94618684-94629720	0	+	94618684	94618684	8553170	4	81,114,76,57,	0,10126,10407,10979,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	94618686	94630704	chr5:94618686-94630704	0	+	94628810	94630704	789624	5	79,107,114,76,202,	0,1378,10124,10405,11816,
#Partially deleted in new
chr5	94628881	94665926	chr5:94628881-94665926	0	+	94628881	94662325	789624	6	43,76,241,54,159,20,	0,210,1621,33416,34868,37025,
#Partially deleted in new
chr5	94678398	94695871	chr5:94678398-94695871	0	+	94678398	94678398	8553170	7	557,146,164,134,93,183,1041,	0,8174,10107,11074,13165,13675,16432,
#Partially deleted in new
chr5	94691194	94692180	chr5:94691194-94692180	0	+	94691194	94691194	8553170	2	462,107,	0,879,
#Partially deleted in new
chr5	94692185	94739436	chr5:94692185-94739436	0	+	94692185	94692185	8553170	3	71,65,273,	0,16039,46978,
#Partially deleted in new
chr5	94703740	94784897	chr5:94703740-94784897	0	-	94703740	94703740	8553170	6	1463,98,110,110,54,70,	0,4771,7077,11036,75369,81087,
#Partially deleted in new
chr5	94705099	95284575	chr5:94705099-95284575	3	-	94707495	95284575	789624	23	2468,98,110,110,54,120,120,75,102,103,103,94,187,131,171,78,60,39,112,80,143,118,720,	0,3412,5718,9677,74010,93913,163233,165317,165772,166215,168039,183779,189549,204151,207706,212796,218862,226853,234984,237248,248119,312267,578756,
#Partially deleted in new
chr5	94706578	95081645	chr5:94706578-95081645	1	-	94707495	95081482	789624	20	989,98,110,110,54,120,75,102,103,103,94,187,131,171,39,112,80,143,118,220,	0,1933,4239,8198,72531,161754,163838,164293,164736,166560,182300,188070,202672,206227,225374,233505,235769,246640,310788,374847,
#Partially deleted in new
chr5	94706590	94929701	chr5:94706590-94929701	1	-	94707495	94912874	789624	16	977,98,110,110,54,120,120,75,102,103,103,94,187,131,171,74,	0,1921,4227,8186,72519,92422,161742,163826,164281,164724,166548,182288,188058,202660,206215,223037,
#Partially deleted in new
chr5	94707495	95081482	chr5:94707495-95081482	1	-	94707495	95081482	789624	23	72,98,110,110,54,120,120,75,102,103,103,94,187,131,171,78,60,39,112,80,143,118,57,	0,1016,3322,7281,71614,91517,160837,162921,163376,163819,165643,181383,187153,201755,205310,210400,216466,224457,232588,234852,245723,309871,373930,
#Partially deleted in new
chr5	94707524	94710693	chr5:94707524-94710693	0	-	94707524	94707524	8553170	2	43,2182,	0,987,
#Partially deleted in new
chr5	94708548	95081645	chr5:94708548-95081645	0	-	94708548	95081482	789624	19	61,110,110,54,120,120,75,102,103,103,94,187,131,171,112,80,143,118,220,	0,2269,6228,70561,90464,159784,161868,162323,162766,164590,180330,186100,200702,204257,231535,233799,244670,308818,372877,
#Partially deleted in new
chr5	94788788	94793599	chr5:94788788-94793599	3	+	94788788	94788788	8553170	4	552,125,1005,258,	0,688,3057,4553,
#Partially deleted in new
chr5	94799084	95081572	chr5:94799084-95081572	0	-	94799084	94942391	789624	17	48,120,75,102,103,103,94,187,131,171,78,60,39,112,80,101,147,	0,69248,71332,71787,72230,74054,89794,95564,110166,113721,118811,124877,132868,140999,143263,154134,282341,
#Partially deleted in new
chr5	94825960	94826694	chr5:94825960-94826694	7	-	94825960	94825960	16724991	1	734,	0,
#Partially deleted in new
chr5	94867142	95081627	chr5:94867142-95081627	1	-	94867352	95081482	789624	18	240,120,75,102,103,103,94,187,131,171,78,60,39,112,80,143,118,202,	0,1190,3274,3729,4172,5996,21736,27506,42108,45663,50753,56819,64810,72941,75205,86076,150224,214283,
#Partially deleted in new
chr5	94867221	94940176	chr5:94867221-94940176	0	-	94868326	94940176	789624	11	1231,75,102,103,103,94,187,131,171,60,93,	0,3195,3650,4093,5917,21657,27427,42029,45584,56740,72862,
#Deleted in new
chr5	94877598	94877777	chr5:94877598-94877777	3	-	94877598	94877598	8553170	1	179,	0,
#Partially deleted in new
chr5	94909315	95284000	chr5:94909315-95284000	0	-	94909315	95284000	789624	8	66,171,39,112,80,143,118,145,	0,3490,22637,30768,33032,43903,108051,374540,
#Partially deleted in new
chr5	94912857	95017487	chr5:94912857-95017487	0	-	94912857	95017487	789624	5	119,112,80,143,121,	0,27226,29490,40361,104509,
#Partially deleted in new
chr5	94930742	95017484	chr5:94930742-95017484	0	-	94931934	95017484	789624	5	1249,112,80,143,118,	0,9341,11605,22476,86624,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	94942349	94979066	chr5:94942349-94979066	0	-	94942349	94942349	8553170	4	78,143,65,83,	0,10869,34395,36634,
#Partially deleted in new
chr5	94942384	95081646	chr5:94942384-95081646	0	-	94942384	95081482	789624	5	43,143,118,45,221,	0,10834,74982,126400,139041,
#Partially deleted in new
chr5	94942393	95166175	chr5:94942393-95166175	0	-	94942393	94942393	8553170	5	34,143,118,33,53,	0,10825,74973,211848,223729,
#Partially deleted in new
chr5	94953292	95081884	chr5:94953292-95081884	0	-	94953292	95081482	789624	4	69,118,212,84,	0,64074,128133,128508,
#Deleted in new
chr5	94979150	94980893	chr5:94979150-94980893	3	+	94979150	94979150	8553170	2	457,70,	0,1673,
#Partially deleted in new
chr5	95017366	95081582	chr5:95017366-95081582	0	-	95017366	95017366	8553170	3	118,119,157,	0,20702,64059,
#Partially deleted in new
chr5	95391343	95450437	chr5:95391343-95450437	3	+	95391389	95450282	789624	10	170,104,65,244,119,130,107,136,196,289,	0,1450,4767,22603,28940,37259,45456,55218,56925,58805,
#Partially deleted in new
chr5	95392811	95436804	chr5:95392811-95436804	0	+	95392811	95420290	789624	6	86,65,105,119,130,5,	0,3299,21274,27472,35791,43988,
#Partially deleted in new
chr5	95392821	95450385	chr5:95392821-95450385	0	+	95392821	95424092	789624	11	76,65,244,119,141,130,107,136,196,76,237,	0,3289,21125,27462,31228,35781,43978,53740,55447,55899,57327,
#Partially deleted in new
chr5	95392825	95397060	chr5:95392825-95397060	0	+	95392825	95392825	8553170	3	72,65,457,	0,3285,3778,
#Partially deleted in new
chr5	95392831	95446689	chr5:95392831-95446689	0	+	95392831	95428608	789624	6	66,65,244,130,107,128,	0,3279,21115,35771,43968,53730,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	95392843	95410810	chr5:95392843-95410810	0	+	95392843	95392843	8553170	4	54,65,188,56,	0,3267,13277,17911,
#Partially deleted in new
chr5	95392851	95428732	chr5:95392851-95428732	0	+	95392851	95413996	789624	5	46,65,207,119,130,	0,3259,21132,27432,35751,
#Partially deleted in new
chr5	95428678	95450454	chr5:95428678-95450454	0	+	95428678	95450282	789624	3	54,196,306,	0,19590,21470,
#Partially deleted in new
chr5	95436799	95450441	chr5:95436799-95450441	0	+	95436799	95448323	789624	3	107,196,293,	0,11469,13349,
#Deleted in new
chr5	95440043	95440687	chr5:95440043-95440687	7	+	95440043	95440043	16724991	1	644,	0,
#Boundary problem: need 44, got 0, diff 44, mapped 0.0
chr5	95461754	95554977	chr5:95461754-95554977	3	-	95464606	95547150	8553170	44	2927,124,131,153,159,122,129,112,54,73,222,124,125,78,94,142,75,69,57,62,79,145,177,103,254,125,180,127,104,87,140,102,141,109,99,141,76,92,144,91,156,70,222,42,	0,6111,8025,16535,20718,22969,29153,32927,33209,35661,36615,41125,42059,45179,47839,50722,51816,53100,54598,54770,54917,55161,55391,58961,60299,61447,61900,62710,63643,63832,66258,67246,68334,75062,75288,78935,79550,80060,81429,85306,86805,88826,91252,93181,
#Partially deleted in new
chr5	95463894	95555007	chr5:95463894-95555007	1	-	95464606	95547150	789624	43	787,124,131,153,159,122,129,112,54,73,222,124,125,78,94,142,75,69,57,62,79,145,177,103,254,125,180,127,104,87,140,102,141,109,99,141,76,92,144,91,156,70,72,	0,3971,5885,14395,18578,20829,27013,30787,31069,33521,34475,38985,39919,43039,45699,48582,49676,50960,52458,52630,52777,53021,53251,56821,58159,59307,59760,60570,61503,61692,64118,65106,66194,72922,73148,76795,77410,77920,79289,83166,84665,86686,91041,
#Partially deleted in new
chr5	95482593	95495479	chr5:95482593-95495479	0	-	95482593	95482593	8553170	5	38,122,129,112,516,	0,2130,8314,12088,12370,
#Partially deleted in new
chr5	95502902	95516674	chr5:95502902-95516674	0	-	95502902	95502902	8553170	9	101,125,59,94,142,75,69,57,150,	0,911,4031,6691,9574,10668,11952,13450,13622,
#Partially deleted in new
chr5	95503849	95513000	chr5:95503849-95513000	0	-	95503849	95503849	8553170	4	89,78,94,524,	0,3084,5744,8627,
#Partially deleted in new
chr5	95506933	95515062	chr5:95506933-95515062	0	-	95506933	95506933	8553170	6	78,94,142,75,69,50,	0,2660,5543,6637,7921,8079,
#Partially deleted in new
chr5	95506976	95522086	chr5:95506976-95522086	0	-	95506976	95506976	8553170	10	35,94,142,75,69,57,536,177,103,33,	0,2617,5500,6594,7878,9376,9548,10169,13739,15077,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	95513131	95516768	chr5:95513131-95516768	0	-	95513131	95513131	8553170	4	514,69,57,244,	0,1723,3221,3393,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	95521368	95521475	chr5:95521368-95521475	3	+	95521368	95521368	8553170	1	107,	0,
#Partially deleted in new
chr5	95522077	95525661	chr5:95522077-95525661	0	-	95525437	95525661	789624	6	223,125,180,127,67,75,	0,1124,1577,2387,3320,3509,
#Partially deleted in new
chr5	95522087	95540800	chr5:95522087-95540800	0	-	95523252	95540800	789624	5	220,125,109,99,111,	0,1114,14729,14955,18602,
#Partially deleted in new
chr5	95522087	95554977	chr5:95522087-95554977	0	-	95522087	95547150	789624	18	220,125,180,127,104,87,140,102,141,109,99,141,76,92,91,156,70,42,	0,1114,1567,2377,3310,3499,5925,6913,8001,14729,14955,18602,19217,19727,24973,26472,28493,32848,
#Deleted in new
chr5	95528012	95529361	chr5:95528012-95529361	0	-	95528012	95528012	8553170	3	140,102,95,	0,988,1254,
#Partially deleted in new
chr5	95528834	95537107	chr5:95528834-95537107	0	-	95528834	95528834	8553170	4	268,141,109,65,	0,1254,7982,8208,
#Partially deleted in new
chr5	95536523	95541906	chr5:95536523-95541906	0	-	95536523	95536523	8553170	5	402,99,141,76,92,	0,519,4166,4781,5291,
#Partially deleted in new
chr5	95541854	95554944	chr5:95541854-95554944	0	-	95541854	95547150	789624	6	52,144,91,156,70,64,	0,1329,5206,6705,8726,13026,
#Deleted in new
chr5	95546973	95550757	chr5:95546973-95550757	0	-	95546973	95546973	8553170	3	178,156,177,	0,1586,3607,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	95555073	95605064	chr5:95555073-95605064	3	+	95555278	95603526	789624	8	331,130,160,283,172,225,225,1828,	0,10924,12816,27842,31488,36327,45773,48163,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	95555136	95603680	chr5:95555136-95603680	0	+	95555278	95580937	789624	9	268,130,160,51,283,172,225,225,444,	0,10861,12753,25755,27779,31425,36264,45710,48100,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	95555166	95557057	chr5:95555166-95557057	1	+	95555278	95556222	789624	2	238,850,	0,1041,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	95555182	95603680	chr5:95555182-95603680	0	+	95555278	95600879	789624	9	222,130,160,283,172,225,59,225,444,	0,10815,12707,27733,31379,36218,45442,45664,48054,
#Partially deleted in new
chr5	95555356	95586672	chr5:95555356-95586672	0	+	95555356	95583016	789624	4	48,130,283,111,	0,10641,27559,31205,
#Deleted in new
chr5	95620077	95622142	chr5:95620077-95622142	3	+	95620275	95621580	789624	1	2065,	0,
#Partially deleted in new
chr5	95646753	95656190	chr5:95646753-95656190	0	+	95654061	95656190	789624	5	64,195,176,35,145,	0,5383,7307,7579,9292,
#Partially deleted in new
chr5	95646771	95658082	chr5:95646771-95658082	3	+	95652271	95656309	789624	6	46,195,98,176,35,2037,	0,5365,6345,7289,7561,9274,
#Partially deleted in new
chr5	95646776	95652815	chr5:95646776-95652815	0	+	95646776	95646776	8553170	2	41,679,	0,5360,
#Partially deleted in new
chr5	95646853	95657140	chr5:95646853-95657140	1	+	95654061	95656309	789624	5	1221,195,176,35,1095,	0,5283,7207,7479,9192,
#Partially deleted in new
chr5	95646878	95657133	chr5:95646878-95657133	1	+	95652271	95656309	789624	6	1196,195,98,176,35,1088,	0,5258,6238,7182,7454,9167,
#Partially deleted in new
chr5	95648044	95652863	chr5:95648044-95652863	0	+	95648044	95648044	8553170	2	30,727,	0,4092,
#Partially deleted in new
chr5	95652180	95683010	chr5:95652180-95683010	0	-	95658622	95682854	789624	8	1029,165,129,147,297,96,89,217,	0,3150,3768,4777,6436,11772,30347,30613,
#Partially deleted in new
chr5	95652639	95682991	chr5:95652639-95682991	0	-	95652639	95652639	789624	8	570,165,129,142,96,228,89,173,	0,2691,3309,6132,11313,22772,29888,30179,
#Partially deleted in new
chr5	95652980	95682996	chr5:95652980-95682996	0	-	95658622	95682854	789624	9	229,165,129,147,297,96,228,89,203,	0,2350,2968,3977,5636,10972,22431,29547,29813,
#Partially deleted in new
chr5	95654060	95656333	chr5:95654060-95656333	1	+	95654061	95656053	789624	2	176,288,	0,1985,
#Partially deleted in new
chr5	95658061	95684773	chr5:95658061-95684773	0	+	95658061	95658061	8553170	4	47,339,160,179,	0,1236,12284,26533,
#Partially deleted in new
chr5	95658429	95682996	chr5:95658429-95682996	3	-	95658622	95682854	789624	5	484,96,228,89,203,	0,5523,16982,24098,24364,
#Partially deleted in new
chr5	95658431	95698711	chr5:95658431-95698711	0	-	95658431	95658431	8553170	3	482,96,124,	0,5521,40156,
#Partially deleted in new
chr5	95658600	95683010	chr5:95658600-95683010	0	-	95674758	95682854	789624	6	313,96,103,228,89,217,	0,5352,16085,16811,23927,24193,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	95713521	95732012	chr5:95713521-95732012	0	+	95713521	95713521	8553170	3	190,231,154,	0,4013,18337,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	95716981	95732287	chr5:95716981-95732287	0	-	95716981	95716981	8553170	3	100,130,347,	0,2662,14959,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	95717632	95756093	chr5:95717632-95756093	0	+	95717632	95717632	8553170	6	133,226,187,155,112,698,	0,14226,19256,30700,34606,37763,
#Partially deleted in new
chr5	95730871	95748441	chr5:95730871-95748441	0	+	95730876	95748441	789624	4	25,226,187,109,	0,987,6017,17461,
#Deleted in new
chr5	95731145	95732751	chr5:95731145-95732751	1	+	95731682	95732171	789624	2	539,893,	0,713,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	95731174	95796367	chr5:95731174-95796367	3	+	95731682	95793174	789624	12	510,226,187,155,112,366,113,121,174,167,97,3309,	0,684,5714,17158,21064,24221,32333,36871,49077,52622,57587,61884,
#Partially deleted in new
chr5	95731724	95737011	chr5:95731724-95737011	0	+	95731724	95731724	8553170	2	360,123,	0,5164,
#Partially deleted in new
chr5	95731955	95752287	chr5:95731955-95752287	0	+	95731955	95748422	789624	3	129,155,49,	0,16377,20283,
#Partially deleted in new
chr5	95736938	95763542	chr5:95736938-95763542	0	+	95736938	95755413	789624	4	137,155,366,35,	0,11394,18457,26569,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	95751318	95822726	chr5:95751318-95822726	3	-	95816512	95822662	0	3	142,120,271,	0,65188,71137,
#Partially deleted in new
chr5	95767754	95793246	chr5:95767754-95793246	1	+	95767836	95793174	789624	6	136,121,174,167,97,188,	0,291,12497,16042,21007,25304,
#Partially deleted in new
chr5	95768139	95789383	chr5:95768139-95789383	0	+	95768139	95788911	789624	4	27,174,167,622,	0,12112,15657,20622,
#Deleted in new
chr5	95768998	95770700	chr5:95768998-95770700	7	+	95768998	95768998	16724991	1	1702,	0,
#Partially deleted in new
chr5	95780006	95783869	chr5:95780006-95783869	0	+	95780006	95780006	8553170	2	419,73,	0,3790,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	95781335	95822291	chr5:95781335-95822291	0	-	95781335	95781335	8553170	4	1471,61,120,82,	0,8254,35171,40874,
#Partially deleted in new
chr5	95783581	95788853	chr5:95783581-95788853	0	+	95783581	95783581	8553170	2	382,92,	0,5180,
#Partially deleted in new
chr5	95783833	95794332	chr5:95783833-95794332	0	+	95783833	95794031	789624	4	130,97,112,314,	0,4928,9225,10185,
#Partially deleted in new
chr5	95788814	95824383	chr5:95788814-95824383	0	+	95788814	95824021	789624	2	44,547,	0,35022,
#Partially deleted in new
chr5	95788820	95793496	chr5:95788820-95793496	0	+	95788820	95793112	789624	2	38,458,	0,4218,
#Partially deleted in new
chr5	95813848	95823005	chr5:95813848-95823005	1	-	95816512	95822662	0	3	541,120,550,	0,2658,8607,
#Partially deleted in new
chr5	95813970	95822714	chr5:95813970-95822714	1	-	95816512	95822662	0	3	987,120,259,	0,2536,8485,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	95813978	95819502	chr5:95813978-95819502	0	-	95813978	95813978	8553170	2	411,2996,	0,2528,
#Partially deleted in new
chr5	95814562	95822722	chr5:95814562-95822722	1	-	95816512	95822662	0	3	245,120,267,	0,1944,7893,
#Partially deleted in new
chr5	95816409	95822711	chr5:95816409-95822711	1	-	95816512	95822662	0	2	217,256,	0,6046,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	95834423	95835046	chr5:95834423-95835046	7	-	95834423	95834423	16724991	2	278,140,	0,483,
#Partially deleted in new
chr5	95835942	95852721	chr5:95835942-95852721	3	-	95835942	95835942	8553170	2	314,136,	0,16643,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	95849308	95849855	chr5:95849308-95849855	3	+	95849308	95849308	8553170	1	547,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	95852231	95859020	chr5:95852231-95859020	2	+	95852231	95852231	789624	3	483,104,217,	0,4646,6572,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	95852231	95860133	chr5:95852231-95860133	1	+	95852231	95852231	8553170	4	483,135,104,1330,	0,560,4646,6572,
#Deleted in new
chr5	95856868	95860133	chr5:95856868-95860133	0	+	95856868	95856868	8553170	2	113,1330,	0,1935,
#Deleted in new
chr5	95861805	95863096	chr5:95861805-95863096	0	+	95861805	95861805	8553170	2	272,461,	0,830,
#Partially deleted in new
chr5	95885097	95962071	chr5:95885097-95962071	3	-	95888870	95961721	0	12	3890,45,172,64,571,88,125,260,164,122,48,497,	0,3988,6005,10530,13142,15595,15858,21425,28673,34326,57904,76477,
#Partially deleted in new
chr5	95890948	95898317	chr5:95890948-95898317	0	-	95891003	95898317	789624	3	326,64,78,	0,4679,7291,
#Partially deleted in new
chr5	95898763	95961848	chr5:95898763-95961848	0	-	95898763	95961721	789624	5	47,88,125,48,274,	0,1929,2192,44238,62811,
#Deleted in new
chr5	95900227	95901132	chr5:95900227-95901132	0	-	95900227	95900227	8553170	2	553,177,	0,728,
#Partially deleted in new
chr5	95906523	95961787	chr5:95906523-95961787	0	-	95906523	95906523	8553170	3	259,48,213,	0,36478,55051,
#Partially deleted in new
chr5	95913325	95943013	chr5:95913325-95943013	0	-	95913325	95913325	8553170	3	609,122,12,	0,6098,29676,
#Partially deleted in new
chr5	95913819	95961674	chr5:95913819-95961674	0	-	95932665	95961674	789624	5	115,122,82,48,100,	0,5604,18812,29182,47755,
#Partially deleted in new
chr5	95942917	95961782	chr5:95942917-95961782	0	-	95942917	95942917	8553170	2	132,208,	0,18657,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	95962001	96319018	chr5:95962001-96319018	1	+	95962001	95962001	8553170	2	35,546,	0,356471,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	95964998	95986311	chr5:95964998-95986311	3	-	95964998	95964998	8553170	4	253,75,191,52,	0,5223,15338,21261,
#Deleted in new
chr5	95973040	95973446	chr5:95973040-95973446	7	-	95973040	95973040	16724991	1	406,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	96050114	96215519	chr5:96050114-96215519	3	+	96050114	96050114	8553170	3	87,72,545,	0,60819,164860,
#Deleted in new
chr5	96079137	96079212	chr5:96079137-96079212	3	+	96079137	96079137	5263520	1	75,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	96210120	96210227	chr5:96210120-96210227	3	-	96210120	96210120	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	96213345	96215075	chr5:96213345-96215075	3	-	96213345	96213345	8553170	2	444,208,	0,1522,
#Partially deleted in new
chr5	96247775	96278751	chr5:96247775-96278751	3	+	96247775	96247775	8553170	2	242,164,	0,30812,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr5	96390414	96433280	chr5:96390414-96433280	3	-	96393000	96433042	789624	14	2964,162,134,158,234,101,213,173,89,77,147,111,105,418,	0,4449,6921,8464,9538,17808,20359,21903,25618,31465,32898,35405,38798,42448,
#Partially deleted in new
chr5	96392924	96412985	chr5:96392924-96412985	0	-	96392924	96392924	8553170	8	454,162,134,158,234,101,173,65,	0,1939,4411,5954,7028,15298,19393,19996,
#Partially deleted in new
chr5	96392926	96432160	chr5:96392926-96432160	1	-	96393000	96432121	789624	14	452,162,134,158,234,101,213,173,89,77,147,111,105,78,	0,1937,4409,5952,7026,15296,17847,19391,23106,28953,30386,32893,36286,39156,
#Partially deleted in new
chr5	96423382	96434143	chr5:96423382-96434143	0	-	96423382	96433042	789624	5	77,111,105,194,78,	0,2437,5830,9480,10683,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	96529820	96740118	chr5:96529820-96740118	0	+	96529820	96740118	789624	12	60,63,72,60,66,42,57,114,81,69,99,81,	0,145718,166015,192818,196973,197668,199332,199791,200959,206351,208028,210217,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	96584492	96631000	chr5:96584492-96631000	1	+	96584492	96584492	8553170	2	541,34,	0,46474,
#Partially deleted in new
chr5	96662072	96773233	chr5:96662072-96773233	1	+	96722677	96771679	789624	31	93,63,72,60,66,42,57,114,81,69,99,81,93,87,102,84,48,96,96,102,84,51,72,99,105,93,45,93,72,59,594,	0,13466,33763,60566,64721,65416,67080,67539,68707,74099,75776,77965,79193,79421,80582,84269,85272,86445,88514,91987,92585,95371,95510,100201,103148,103980,105365,105834,108458,109571,110567,
#Partially deleted in new
chr5	96662073	96771679	chr5:96662073-96771679	1	+	96662422	96771679	789624	32	92,146,63,72,60,66,42,57,114,81,69,99,81,39,93,87,102,84,48,96,96,102,84,51,72,99,105,93,45,93,72,36,	0,278,13465,33762,60565,64720,65415,67079,67538,68706,74098,75775,77964,78671,79192,79420,80581,84268,85271,86444,88513,91986,92584,95370,95509,100200,103147,103979,105364,105833,108457,109570,
#Partially deleted in new
chr5	96662202	96746425	chr5:96662202-96746425	0	+	96662422	96746425	789624	15	295,63,72,60,42,57,114,81,69,99,81,93,87,102,84,	0,13336,33633,60436,65286,66950,67409,68577,73969,75646,77835,79063,79291,80452,84139,
#Partially deleted in new
chr5	96662236	96774683	chr5:96662236-96774683	1	+	96662422	96771679	789624	30	261,63,72,60,42,114,81,69,99,81,39,93,87,102,84,48,96,96,102,84,51,72,99,105,93,45,93,72,59,2044,	0,13302,33599,60402,65252,67375,68543,73935,75612,77801,78508,79029,79257,80418,84105,85108,86281,88350,91823,92421,95207,95346,100037,102984,103816,105201,105670,108294,109407,110403,
#Partially deleted in new
chr5	96662402	96726859	chr5:96662402-96726859	0	+	96662402	96662402	8553170	5	95,63,72,60,106,	0,13136,33433,60236,64351,
#Partially deleted in new
chr5	96662402	96696294	chr5:96662402-96696294	0	+	96662402	96662402	8553170	3	95,63,459,	0,13136,33433,
#Partially deleted in new
chr5	96662422	96741317	chr5:96662422-96741317	0	+	96662422	96741317	789624	13	75,63,72,60,66,42,114,81,69,99,81,39,52,	0,13116,33413,60216,64371,65066,67189,68357,73749,75426,77615,78322,78843,
#Partially deleted in new
chr5	96662422	96771679	chr5:96662422-96771679	1	+	96662422	96771679	789624	30	75,63,72,60,42,57,114,81,69,99,81,39,93,87,102,84,48,96,96,102,84,51,72,99,105,93,45,93,72,36,	0,13116,33413,60216,65066,66730,67189,68357,73749,75426,77615,78322,78843,79071,80232,83919,84922,86095,88164,91637,92235,95021,95160,99851,102798,103630,105015,105484,108108,109221,
#Partially deleted in new
chr5	96662427	96679632	chr5:96662427-96679632	0	+	96662427	96662427	8553170	3	70,63,316,	0,13111,16889,
#Partially deleted in new
chr5	96662474	96741585	chr5:96662474-96741585	0	+	96662474	96741585	789624	13	23,63,72,60,42,57,114,69,99,81,39,93,92,	0,13064,33361,60164,65014,66678,67137,73697,75374,77563,78270,78791,79019,
#Partially deleted in new
chr5	96662999	96730849	chr5:96662999-96730849	0	+	96663136	96730849	789624	7	167,63,72,60,42,114,70,	0,12539,32836,59639,64489,66612,67780,
#Partially deleted in new
chr5	96663020	96675953	chr5:96663020-96675953	0	+	96663020	96663020	8553170	2	146,415,	0,12518,
#Partially deleted in new
chr5	96663024	96729691	chr5:96663024-96729691	0	+	96663136	96729691	789624	8	142,63,72,60,66,42,57,80,	0,12514,32811,59614,63769,64464,66128,66587,
#Partially deleted in new
chr5	96663024	96729725	chr5:96663024-96729725	0	+	96663136	96729725	789624	7	142,63,72,60,66,42,114,	0,12514,32811,59614,63769,64464,66587,
#Partially deleted in new
chr5	96663052	96772692	chr5:96663052-96772692	1	+	96663136	96771679	789624	31	114,63,72,60,42,57,114,81,69,99,81,39,93,87,102,84,48,96,96,102,84,51,72,99,105,93,45,93,72,59,53,	0,12486,32783,59586,64436,66100,66559,67727,73119,74796,76985,77692,78213,78441,79602,83289,84292,85465,87534,91007,91605,94391,94530,99221,102168,103000,104385,104854,107478,108591,109587,
#Partially deleted in new
chr5	96695784	96772814	chr5:96695784-96772814	1	+	96722677	96771679	789624	30	123,60,66,42,57,114,81,69,99,81,39,93,87,102,84,48,96,96,102,84,51,72,99,105,93,45,93,72,59,175,	0,26854,31009,31704,33368,33827,34995,40387,42064,44253,44960,45481,45709,46870,50557,51560,52733,54802,58275,58873,61659,61798,66489,69436,70268,71653,72122,74746,75859,76855,
#Partially deleted in new
chr5	96695876	96714971	chr5:96695876-96714971	0	+	96695876	96695876	8553170	2	31,331,	0,18764,
#Partially deleted in new
chr5	96702788	96774679	chr5:96702788-96774679	1	+	96722677	96771679	789624	30	127,60,66,42,57,114,81,69,99,81,39,93,87,102,84,48,96,96,102,84,51,72,99,105,93,45,93,72,59,2040,	0,19850,24005,24700,26364,26823,27991,33383,35060,37249,37956,38477,38705,39866,43553,44556,45729,47798,51271,51869,54655,54794,59485,62432,63264,64649,65118,67742,68855,69851,
#Partially deleted in new
chr5	96702799	96773570	chr5:96702799-96773570	1	+	96726814	96771679	789624	30	116,60,106,42,57,114,81,69,99,81,39,93,87,102,84,48,96,96,102,84,51,72,99,102,93,45,93,72,59,931,	0,19839,23954,24689,26353,26812,27980,33372,35049,37238,37945,38466,38694,39855,43542,44545,45718,47787,51260,51858,54644,54783,59474,62424,63253,64638,65107,67731,68844,69840,
#Partially deleted in new
chr5	96702800	96774683	chr5:96702800-96774683	3	+	96722677	96771679	789624	29	115,60,42,57,114,81,69,99,81,39,93,87,102,84,48,96,96,102,84,51,72,99,105,93,45,93,72,59,2044,	0,19838,24688,26352,26811,27979,33371,35048,37237,37944,38465,38693,39854,43541,44544,45717,47786,51259,51857,54643,54782,59473,62420,63252,64637,65106,67730,68843,69839,
#Partially deleted in new
chr5	96702801	96767482	chr5:96702801-96767482	0	+	96722677	96767482	789624	26	114,60,66,42,57,114,81,69,99,81,39,93,87,102,84,48,96,96,102,84,51,72,99,105,93,45,	0,19837,23992,24687,26351,26810,27978,33370,35047,37236,37943,38464,38692,39853,43540,44543,45716,47785,51258,51856,54642,54781,59472,62419,63251,64636,
#Partially deleted in new
chr5	96702802	96736187	chr5:96702802-96736187	0	+	96722677	96729652	789624	8	113,60,66,42,57,136,81,16,	0,19836,23991,24686,26350,26787,27977,33369,
#Partially deleted in new
chr5	96702805	96715108	chr5:96702805-96715108	0	+	96702805	96702805	8553170	2	110,468,	0,11835,
#Partially deleted in new
chr5	96702805	96772892	chr5:96702805-96772892	1	+	96722677	96771679	789624	27	110,60,42,57,114,99,81,39,93,87,102,84,48,96,96,102,84,51,72,99,105,93,45,93,72,59,253,	0,19833,24683,26347,26806,35043,37232,37939,38460,38688,39849,43536,44539,45712,47781,51254,51852,54638,54777,59468,62415,63247,64632,65101,67725,68838,69834,
#Partially deleted in new
chr5	96702805	96771679	chr5:96702805-96771679	1	+	96722677	96771679	789624	27	110,60,42,57,114,81,69,99,81,93,87,102,84,48,96,96,102,84,51,72,99,105,93,45,93,72,36,	0,19833,24683,26347,26806,27974,33366,35043,37232,38460,38688,39849,43536,44539,45712,47781,51254,51852,54638,54777,59468,62415,63247,64632,65101,67725,68838,
#Partially deleted in new
chr5	96702805	96772786	chr5:96702805-96772786	1	+	96726814	96771679	789624	30	110,80,66,42,57,114,81,69,99,81,39,93,87,102,84,48,96,96,102,84,51,72,99,105,93,45,93,72,59,147,	0,19833,23988,24683,26347,26806,27974,33366,35043,37232,37939,38460,38688,39849,43536,44539,45712,47781,51254,51852,54638,54777,59468,62415,63247,64632,65101,67725,68838,69834,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	96702842	96755196	chr5:96702842-96755196	0	+	96702842	96702842	8553170	13	73,99,81,39,93,87,102,84,48,96,96,102,539,	0,35006,37195,37902,38423,38651,39812,43499,44502,45675,47744,51217,51815,
#Partially deleted in new
chr5	96702856	96740104	chr5:96702856-96740104	0	+	96722677	96740104	789624	8	59,60,42,57,114,69,99,67,	0,19782,24632,26296,26755,33315,34992,37181,
#Partially deleted in new
chr5	96728308	96772819	chr5:96728308-96772819	0	+	96728308	96728308	8553170	26	110,57,114,81,69,99,81,93,87,102,84,48,96,96,102,84,51,72,99,105,93,45,93,72,59,180,	0,844,1303,2471,7863,9540,11729,12957,13185,14346,18033,19036,20209,22278,25751,26349,29135,29274,33965,36912,37744,39129,39598,42222,43335,44331,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	96728587	96729703	chr5:96728587-96729703	0	+	96728587	96728587	8553170	2	622,92,	0,1024,
#Partially deleted in new
chr5	96736175	96741809	chr5:96736175-96741809	0	+	96736175	96736175	8553170	5	65,99,81,93,316,	0,1673,3862,5090,5318,
#Deleted in new
chr5	96741078	96742698	chr5:96741078-96742698	3	-	96741078	96741078	8553170	2	269,296,	0,1324,
#Partially deleted in new
chr5	96741324	96773055	chr5:96741324-96773055	0	+	96741324	96771679	789624	19	34,87,102,84,48,96,96,102,84,51,72,99,102,93,45,93,72,59,416,	0,169,1330,5017,6020,7193,9262,12735,13333,16119,16258,20949,23899,24728,26113,26582,29206,30319,31315,
#Partially deleted in new
chr5	96741341	96774683	chr5:96741341-96774683	0	+	96741341	96771679	789624	18	17,87,102,84,48,96,96,102,84,51,72,99,105,93,45,93,59,2044,	0,152,1313,5000,6003,7176,9245,12718,13316,16102,16241,20932,23879,24711,26096,26565,30302,31298,
#Partially deleted in new
chr5	96741873	96772813	chr5:96741873-96772813	1	+	96742660	96771679	789624	18	283,102,84,48,96,96,102,84,51,72,99,105,93,45,93,72,59,174,	0,781,4468,5471,6644,8713,12186,12784,15570,15709,20400,23347,24179,25564,26033,28657,29770,30766,
#Partially deleted in new
chr5	96742194	96750621	chr5:96742194-96750621	0	+	96742660	96750621	789624	5	284,102,48,96,35,	0,460,5150,6323,8392,
#Partially deleted in new
chr5	96742220	96747399	chr5:96742220-96747399	0	+	96742660	96747399	789624	4	258,102,84,55,	0,434,4121,5124,
#Partially deleted in new
chr5	96743539	96772706	chr5:96743539-96772706	1	+	96743626	96771679	789624	17	207,84,48,96,96,102,84,51,72,99,105,93,45,93,72,59,67,	0,2802,3805,4978,7047,10520,11118,13904,14043,18734,21681,22513,23898,24367,26991,28104,29100,
#Partially deleted in new
chr5	96743568	96773412	chr5:96743568-96773412	0	+	96743568	96771679	789624	18	178,84,48,96,96,102,84,51,72,99,102,93,45,93,72,59,248,145,	0,2773,3776,4949,7018,10491,11089,13875,14014,18705,21655,22484,23869,24338,26962,28075,29071,29699,
#Partially deleted in new
chr5	96743626	96774679	chr5:96743626-96774679	1	+	96743626	96771679	789624	17	120,84,48,96,96,102,84,51,72,99,102,93,45,93,72,59,2040,	0,2715,3718,4891,6960,10433,11031,13817,13956,18647,21597,22426,23811,24280,26904,28017,29013,
#Partially deleted in new
chr5	96743672	96748717	chr5:96743672-96748717	0	+	96743672	96743672	8553170	4	74,84,48,200,	0,2669,3672,4845,
#Partially deleted in new
chr5	96757585	96779595	chr5:96757585-96779595	0	+	96757585	96771679	789624	12	69,99,105,93,45,93,72,59,248,79,87,274,	0,4688,7635,8467,9852,10321,12945,14058,15054,15682,19282,21736,
#Partially deleted in new
chr5	96760809	96808100	chr5:96760809-96808100	3	-	96763199	96803926	0	20	2419,148,82,141,162,185,157,184,80,155,72,132,132,114,155,121,135,139,541,241,	0,15594,19613,20248,20883,22241,23114,24978,25660,27721,29486,29702,31251,32590,32993,34232,36365,40052,42593,47050,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	96768947	96773054	chr5:96768947-96773054	0	+	96768947	96768947	8553170	2	1655,1411,	0,2696,
#Partially deleted in new
chr5	96774483	96807909	chr5:96774483-96807909	1	-	96776395	96803926	0	19	2068,82,141,162,185,157,184,80,155,72,132,132,114,155,121,135,139,541,50,	0,5939,6574,7209,8567,9440,11304,11986,14047,15812,16028,17577,18916,19319,20558,22691,26378,28919,33376,
#Partially deleted in new
chr5	96775916	96781181	chr5:96775916-96781181	0	-	96776114	96781181	789624	4	278,148,82,124,	0,487,4506,5141,
#Partially deleted in new
chr5	96781693	96786760	chr5:96781693-96786760	0	-	96781693	96781693	8553170	6	161,185,157,184,80,103,	0,1357,2230,4094,4776,4964,
#Deleted in new
chr5	96784776	96785999	chr5:96784776-96785999	3	+	96784776	96784776	8553170	2	721,272,	0,951,
#Deleted in new
chr5	96784959	96785999	chr5:96784959-96785999	0	+	96784959	96784959	8553170	2	531,280,	0,760,
#Partially deleted in new
chr5	96785638	96790626	chr5:96785638-96790626	0	-	96785638	96785638	8553170	5	333,80,155,72,115,	0,831,2892,4657,4873,
#Deleted in new
chr5	96790584	96793671	chr5:96790584-96793671	0	-	96790584	96790584	8553170	3	59,132,272,	0,1476,2815,
#Partially deleted in new
chr5	96797246	96807922	chr5:96797246-96807922	0	-	96797246	96797249	8553170	3	63,425,63,	0,6156,10613,
#Partially deleted in new
chr5	96800933	96807922	chr5:96800933-96807922	0	-	96800933	96800960	789624	3	67,425,63,	0,2469,6926,
#Partially deleted in new
chr5	96804352	96806102	chr5:96804352-96806102	3	+	96804352	96804352	8553170	2	130,344,	0,1406,
#Deleted in new
chr5	96805666	96806105	chr5:96805666-96806105	0	+	96805666	96805666	8553170	1	439,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	96814027	96935809	chr5:96814027-96935809	3	-	96814027	96814027	8553170	4	283,181,93,1688,	0,8909,59258,120094,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	96814031	96873612	chr5:96814031-96873612	0	-	96814031	96814031	8553170	3	279,93,98,	0,59254,59483,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	96814173	96873673	chr5:96814173-96873673	0	-	96814173	96814173	8553170	4	137,181,93,159,	0,8763,59112,59341,
#Partially deleted in new
chr5	96848691	96873652	chr5:96848691-96873652	0	-	96848691	96848691	8553170	3	132,93,138,	0,24594,24823,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr5	96875938	96919716	chr5:96875938-96919716	3	+	96879685	96917605	0	19	589,697,139,135,121,155,114,132,132,69,176,80,184,157,185,162,141,82,2255,	0,3625,7853,10716,13246,16360,19307,20434,20793,24182,25567,26335,27438,33022,33641,36698,37378,39749,41523,
#Partially deleted in new
chr5	96875985	96909030	chr5:96875985-96909030	0	+	96879685	96909030	789624	14	105,697,139,135,121,155,114,132,132,69,176,80,184,70,	0,3578,7806,10669,13199,16313,19260,20387,20746,24135,25520,26288,27391,32975,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr5	96876499	96917905	chr5:96876499-96917905	0	+	96879685	96900216	0	19	28,697,139,135,121,155,114,132,132,125,176,80,184,157,230,162,141,82,444,	0,3064,7292,10155,12685,15799,18746,19873,20232,23621,25006,25774,26877,32461,33080,36137,36817,39188,40962,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr5	96876505	96917932	chr5:96876505-96917932	1	+	96879685	96917605	0	18	22,697,139,121,155,114,132,132,69,176,80,184,157,185,162,141,82,471,	0,3058,7286,12679,15793,18740,19867,20226,23615,25000,25768,26871,32455,33074,36131,36811,39182,40956,
#Partially deleted in new
chr5	96879563	96889488	chr5:96879563-96889488	1	+	96879685	96889388	0	4	697,139,135,304,	0,4228,7091,9621,
#Partially deleted in new
chr5	96880932	96883825	chr5:96880932-96883825	0	+	96881427	96883825	789624	2	548,34,	0,2859,
#Partially deleted in new
chr5	96889216	96896862	chr5:96889216-96896862	0	+	96889216	96896862	789624	4	89,155,114,131,	0,3082,6029,7515,
#Partially deleted in new
chr5	96892417	96902816	chr5:96892417-96902816	0	+	96892417	96892417	8553170	8	36,114,132,132,69,176,80,174,	0,2828,3955,4314,7703,9088,9856,10225,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	96896402	96910280	chr5:96896402-96910280	0	+	96896402	96896402	8553170	8	102,132,69,176,80,184,152,701,	0,329,3718,5103,5871,6974,12563,13177,
#Partially deleted in new
chr5	96896571	96900242	chr5:96896571-96900242	0	+	96896571	96896571	8553170	2	292,122,	0,3549,
#Partially deleted in new
chr5	96913337	96915849	chr5:96913337-96915849	0	+	96913337	96915805	789624	2	120,162,	0,2350,
#Deleted in new
chr5	96935393	96937766	chr5:96935393-96937766	0	+	96935393	96935393	8553170	2	302,1773,	0,600,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr5	96935463	97037515	chr5:96935463-97037515	3	+	96936155	97028533	0	18	711,841,139,132,121,155,114,132,132,161,89,184,157,185,162,141,82,9114,	0,43674,49616,51075,57551,58353,60926,62550,67951,70609,70963,78184,79475,86836,89057,91153,92269,92938,
#Partially deleted in new
chr5	96942298	96943184	chr5:96942298-96943184	7	+	96942298	96942298	16724991	2	70,292,	0,594,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr5	96958450	97029036	chr5:96958450-97029036	1	+	96979160	97028533	0	18	326,841,139,132,121,155,114,132,132,161,89,184,157,185,162,141,82,635,	0,20687,26629,28088,34564,35366,37939,39563,44964,47622,47976,55197,56488,63849,66070,68166,69282,69951,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	96962655	96962757	chr5:96962655-96962757	3	-	96962655	96962655	8553170	1	102,	0,
#Deleted in new
chr5	96996012	96998084	chr5:96996012-96998084	0	+	96996012	96996012	8553170	2	491,71,	0,2001,
#Partially deleted in new
chr5	96996377	97006382	chr5:96996377-97006382	0	+	96996377	96996377	8553170	4	126,132,132,310,	0,1636,7037,9695,
#Partially deleted in new
chr5	97056401	97057358	chr5:97056401-97057358	7	-	97056401	97056401	16724991	1	957,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	97089074	97437217	chr5:97089074-97437217	3	+	97089074	97089074	8553170	7	130,374,69,233,165,157,665,	0,12684,13951,93933,94430,342669,347478,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	97091866	97142872	chr5:97091866-97142872	3	-	97094747	97142576	789624	6	3169,78,96,141,164,378,	0,4943,13323,15493,32599,50628,
#Partially deleted in new
chr5	97107483	97142753	chr5:97107483-97142753	0	-	97107483	97137113	789624	4	17,164,89,259,	0,16982,29620,35011,
#Partially deleted in new
chr5	97160866	97183260	chr5:97160866-97183260	3	-	97163060	97183191	0	10	2359,97,525,93,192,89,176,117,139,135,	0,4184,6600,7893,10339,12308,16249,16865,18188,22259,
#Partially deleted in new
chr5	97162935	97167577	chr5:97162935-97167577	0	-	97163060	97167577	789624	4	290,97,105,111,	0,2115,3331,4531,
#Partially deleted in new
chr5	97164958	97167719	chr5:97164958-97167719	0	-	97164978	97167719	789624	2	189,253,	0,2508,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	97166745	97183222	chr5:97166745-97183222	1	-	97167438	97183191	0	8	1246,93,192,89,176,117,139,97,	0,2014,4460,6429,10370,10986,12309,16380,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	97175949	97176113	chr5:97175949-97176113	3	-	97175949	97175949	8553170	1	164,	0,
#Partially deleted in new
chr5	97177003	97183170	chr5:97177003-97183170	0	-	97177003	97177003	8553170	4	288,117,139,45,	0,728,2051,6122,
#Partially deleted in new
chr5	97178829	97183160	chr5:97178829-97183160	0	-	97178829	97178829	8553170	2	364,35,	0,4296,
#Partially deleted in new
chr5	97179142	97183242	chr5:97179142-97183242	0	-	97183077	97183191	789624	2	51,442,	0,3658,
#Partially deleted in new
chr5	97188089	97201880	chr5:97188089-97201880	3	-	97188089	97188089	8553170	2	154,39,	0,13752,
#Deleted in new
chr5	97336857	97337040	chr5:97336857-97337040	7	-	97336857	97336857	16724991	1	183,	0,
#Deleted in new
chr5	97368775	97370421	chr5:97368775-97370421	7	+	97368775	97368775	16724991	1	1646,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	97449357	97449741	chr5:97449357-97449741	7	-	97449357	97449357	16724991	1	384,	0,
#Partially deleted in new
chr5	97504695	97671046	chr5:97504695-97671046	3	+	97504695	97504695	789624	4	97,62,112,453,	0,16533,163855,165898,
#Deleted in new
chr5	97677546	97678681	chr5:97677546-97678681	7	-	97677546	97677546	16724991	1	1135,	0,
#Deleted in new
chr5	97737893	97738913	chr5:97737893-97738913	7	+	97737893	97737893	16724991	1	1020,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	97881427	97922695	chr5:97881427-97922695	3	+	97881427	97881427	8553170	2	140,565,	0,40703,
#Partially deleted in new
chr5	98025964	98026139	chr5:98025964-98026139	7	+	98025964	98025964	16724991	1	175,	0,
#Partially deleted in new
chr5	98086259	98161193	chr5:98086259-98161193	3	-	98086259	98086259	8553170	5	25,172,114,93,247,	0,7140,74046,74440,74687,
#Partially deleted in new
chr5	98203058	98205193	chr5:98203058-98205193	7	+	98203058	98203058	16724991	2	81,442,	0,1693,
#Deleted in new
chr5	98213401	98214121	chr5:98213401-98214121	7	+	98213401	98213401	16724991	1	720,	0,
#Partially deleted in new
chr5	98338743	98339832	chr5:98338743-98339832	7	+	98338743	98338743	16724991	1	1089,	0,
#Deleted in new
chr5	98392069	98393530	chr5:98392069-98393530	7	-	98392069	98392069	16724991	1	1461,	0,
#Deleted in new
chr5	98402541	98402732	chr5:98402541-98402732	7	-	98402541	98402541	16724991	1	191,	0,
#Deleted in new
chr5	98409674	98410100	chr5:98409674-98410100	7	-	98409674	98409674	16724991	1	426,	0,
#Deleted in new
chr5	98410234	98411792	chr5:98410234-98411792	7	-	98410234	98410234	16724991	1	1558,	0,
#Deleted in new
chr5	98576340	98577260	chr5:98576340-98577260	7	+	98576340	98576340	16724991	1	920,	0,
#Deleted in new
chr5	98679401	98681367	chr5:98679401-98681367	7	+	98679401	98679401	16724991	1	1966,	0,
#Partially deleted in new
chr5	98768649	98779919	chr5:98768649-98779919	0	+	98768649	98768649	8553170	4	213,76,251,340,	0,1948,5306,10930,
#Partially deleted in new
chr5	98769293	98781185	chr5:98769293-98781185	0	+	98769293	98769293	8553170	4	332,321,254,1606,	0,1059,4659,10286,
#Partially deleted in new
chr5	98769293	98770466	chr5:98769293-98770466	0	+	98769293	98769293	8553170	2	332,114,	0,1059,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	98769294	98796494	chr5:98769294-98796494	3	+	98770668	98793753	789624	5	331,76,254,509,3410,	0,1303,4658,10285,23790,
#Partially deleted in new
chr5	98769435	98772975	chr5:98769435-98772975	0	+	98769435	98769435	8553170	3	190,76,34,	0,1162,3506,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	98769617	98773125	chr5:98769617-98773125	3	-	98769617	98769617	8553170	3	1567,177,159,	0,3004,3349,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	98769617	98773088	chr5:98769617-98773088	0	-	98769617	98769617	789624	2	1567,467,	0,3004,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	98770757	98773072	chr5:98770757-98773072	0	-	98770757	98770757	8553170	2	427,106,	0,2209,
#Partially deleted in new
chr5	98770949	98773469	chr5:98770949-98773469	0	-	98770949	98770949	8553170	2	235,162,	0,2358,
#Partially deleted in new
chr5	98771079	98772778	chr5:98771079-98772778	0	-	98771079	98771079	8553170	3	105,111,157,	0,576,1542,
#Partially deleted in new
chr5	98773634	98794055	chr5:98773634-98794055	1	+	98774070	98793753	0	3	572,509,971,	0,5945,19450,
#Partially deleted in new
chr5	98779844	98798643	chr5:98779844-98798643	0	+	98779844	98779844	8553170	2	244,183,	0,18616,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	98792860	98795766	chr5:98792860-98795766	3	-	98792860	98792860	8553170	1	2906,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	98792862	98795766	chr5:98792862-98795766	0	-	98792862	98792862	8553170	1	2904,	0,
#Partially deleted in new
chr5	98833381	98833711	chr5:98833381-98833711	7	+	98833381	98833381	16724991	1	330,	0,
#Partially deleted in new
chr5	98853984	98928957	chr5:98853984-98928957	3	-	98856379	98926386	0	36	2741,211,52,97,179,141,129,117,151,139,131,42,161,177,96,97,149,150,72,153,163,189,191,90,217,128,179,101,226,272,150,65,117,202,201,419,	0,4195,4979,5987,9423,14510,15769,16702,18066,18432,19608,21087,22413,25567,27091,27294,27990,29103,31593,34103,35091,38540,39431,40612,42241,43208,44271,44679,45495,46826,47201,48915,49807,50912,72349,74554,
#Partially deleted in new
chr5	98855203	98926534	chr5:98855203-98926534	1	-	98856379	98926386	0	35	1522,211,52,97,179,141,129,117,151,139,131,42,161,177,96,97,149,150,72,153,163,189,191,90,217,128,179,101,226,272,150,65,117,202,201,	0,2976,3760,4768,8204,13291,14550,15483,16847,17213,18389,19868,21194,24348,25872,26075,26771,27884,30374,32884,33872,37321,38212,39393,41022,41989,43052,43460,44276,45607,45982,47696,48588,49693,71130,
#Partially deleted in new
chr5	98855203	98872557	chr5:98855203-98872557	0	-	98855203	98855203	8553170	9	1522,211,52,97,179,141,129,117,507,	0,2976,3760,4768,8204,13291,14550,15483,16847,
#Partially deleted in new
chr5	98855731	98860682	chr5:98855731-98860682	0	-	98855731	98855731	8553170	4	994,211,52,711,	0,2448,3232,4240,
#Partially deleted in new
chr5	98856282	98868539	chr5:98856282-98868539	0	-	98860044	98868539	789624	5	443,211,52,97,45,	0,1897,2681,3689,12212,
#Partially deleted in new
chr5	98856424	98858664	chr5:98856424-98858664	0	-	98856424	98856424	8553170	2	301,485,	0,1755,
#Partially deleted in new
chr5	98856566	98868629	chr5:98856566-98868629	0	-	98858987	98868629	789624	5	159,211,52,179,135,	0,1613,2397,6841,11928,
#Partially deleted in new
chr5	98863407	98870790	chr5:98863407-98870790	0	-	98863407	98870790	789624	5	179,141,264,129,104,	0,5087,5606,6346,7279,
#Partially deleted in new
chr5	98868929	98872180	chr5:98868929-98872180	0	-	98868929	98868929	8553170	4	348,129,117,130,	0,824,1757,3121,
#Partially deleted in new
chr5	98869478	98870716	chr5:98869478-98870716	0	-	98869478	98869478	8553170	2	404,30,	0,1208,
#Partially deleted in new
chr5	98881246	98888186	chr5:98881246-98888186	0	-	98881246	98881246	8553170	5	129,149,150,72,99,	0,728,1841,4331,6841,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	98883133	98886231	chr5:98883133-98886231	0	-	98883133	98883133	8553170	2	104,654,	0,2444,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	98889730	98889833	chr5:98889730-98889833	3	+	98889730	98889730	8553170	1	103,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	98929170	98995013	chr5:98929170-98995013	3	+	98929170	98929170	8553170	3	141,130,207,	0,47600,65636,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	98936637	98936747	chr5:98936637-98936747	3	-	98936637	98936637	8553170	1	110,	0,
#Partially deleted in new
chr5	98954393	98954972	chr5:98954393-98954972	7	+	98954393	98954393	16724991	1	579,	0,
#Partially deleted in new
chr5	99489558	99499367	chr5:99489558-99499367	7	+	99489558	99489558	16724991	2	382,298,	0,9511,
#Deleted in new
chr5	99499069	99499203	chr5:99499069-99499203	5	+	99499069	99499069	16724991	1	134,	0,
#Deleted in new
chr5	99522310	99525462	chr5:99522310-99525462	7	-	99522310	99522310	16724991	1	3152,	0,
#Partially deleted in new
chr5	99532627	99534611	chr5:99532627-99534611	7	+	99532627	99532627	16724991	4	189,149,183,158,	0,1168,1561,1826,
#Partially deleted in new
chr5	99549431	99577957	chr5:99549431-99577957	3	+	99549431	99549431	8553170	2	101,235,	0,28291,
#Deleted in new
chr5	99594328	99594740	chr5:99594328-99594740	7	-	99594328	99594328	16724991	1	412,	0,
#Deleted in new
chr5	99594879	99595297	chr5:99594879-99595297	7	+	99594879	99594879	16724991	1	418,	0,
#Deleted in new
chr5	99948294	99949583	chr5:99948294-99949583	7	-	99948294	99948294	16724991	1	1289,	0,
#Deleted in new
chr5	99996546	99997932	chr5:99996546-99997932	7	+	99996546	99996546	16724991	1	1386,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	100021803	100021906	chr5:100021803-100021906	3	+	100021803	100021803	8553170	1	103,	0,
#Deleted in new
chr5	100045927	100046374	chr5:100045927-100046374	7	-	100045927	100045927	16724991	1	447,	0,
#Deleted in new
chr5	100046449	100046970	chr5:100046449-100046970	7	+	100046449	100046449	16724991	1	521,	0,
#Deleted in new
chr5	100046976	100048785	chr5:100046976-100048785	7	-	100046976	100046976	16724991	1	1809,	0,
#Deleted in new
chr5	100048987	100050362	chr5:100048987-100050362	7	-	100048987	100048987	16724991	1	1375,	0,
#Deleted in new
chr5	100050358	100050650	chr5:100050358-100050650	7	-	100050358	100050358	16724991	1	292,	0,
#Deleted in new
chr5	100050718	100051063	chr5:100050718-100051063	7	-	100050718	100050718	16724991	1	345,	0,
#Deleted in new
chr5	100051132	100051916	chr5:100051132-100051916	7	-	100051132	100051132	16724991	1	784,	0,
#Deleted in new
chr5	100051919	100052597	chr5:100051919-100052597	7	-	100051919	100051919	16724991	1	678,	0,
#Deleted in new
chr5	100052858	100053539	chr5:100052858-100053539	7	-	100052858	100052858	16724991	1	681,	0,
#Deleted in new
chr5	100053685	100055045	chr5:100053685-100055045	7	-	100053685	100053685	16724991	1	1360,	0,
#Partially deleted in new
chr5	100062274	100067954	chr5:100062274-100067954	7	-	100062274	100062274	16724991	5	85,147,179,146,188,	0,3733,3964,4387,5492,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	100153671	100153779	chr5:100153671-100153779	3	+	100153671	100153671	8553170	1	108,	0,
#Partially deleted in new
chr5	100375699	100381398	chr5:100375699-100381398	7	-	100375699	100375699	16724991	5	85,146,179,149,188,	0,3734,3964,4387,5511,
#Deleted in new
chr5	100388852	100389938	chr5:100388852-100389938	7	+	100388852	100388852	16724991	2	295,467,	0,619,
#Partially deleted in new
chr5	100401440	100408899	chr5:100401440-100408899	3	+	100401440	100401440	8553170	3	343,119,101,	0,5814,7358,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	100449753	100535186	chr5:100449753-100535186	3	-	100449753	100449753	8553170	5	1344,82,44,73,26,	0,68776,76552,84326,85407,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	100450934	100535262	chr5:100450934-100535262	0	-	100450934	100450934	8553170	5	163,68,82,73,102,	0,6122,67595,83145,84226,
#Partially deleted in new
chr5	100535304	100586741	chr5:100535304-100586741	3	+	100535530	100586184	789624	3	660,135,561,	0,26749,50876,
#Partially deleted in new
chr5	100535381	100586228	chr5:100535381-100586228	0	+	100535381	100535381	8553170	2	583,48,	0,50799,
#Partially deleted in new
chr5	100562051	100586729	chr5:100562051-100586729	0	+	100562051	100562051	8553170	3	137,58,549,	0,19295,24129,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	100654111	100657970	chr5:100654111-100657970	3	-	100654111	100654111	8553170	3	281,36,152,	0,1328,3707,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	100733057	100733386	chr5:100733057-100733386	3	+	100733057	100733057	8553170	1	329,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	100806934	100903266	chr5:100806934-100903266	3	-	100811846	100902955	0	5	5195,294,258,132,424,	0,49168,79408,88719,95908,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	100816481	100816565	chr5:100816481-100816565	3	-	100816481	100816481	5263520	1	84,	0,
#Partially deleted in new
chr5	100885310	100903214	chr5:100885310-100903214	1	-	100886338	100902955	0	3	1290,132,372,	0,10343,17532,
#Partially deleted in new
chr5	100886351	100890882	chr5:100886351-100890882	0	-	100886351	100886351	8553170	2	249,310,	0,4221,
#Partially deleted in new
chr5	100895661	100903224	chr5:100895661-100903224	0	-	100900435	100902955	789624	3	124,149,382,	0,4653,7181,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	101581829	101582128	chr5:101581829-101582128	3	+	101581829	101581829	8553170	1	299,	0,
#Partially deleted in new
chr5	101816474	101816780	chr5:101816474-101816780	7	-	101816474	101816474	16724991	1	306,	0,
#Deleted in new
chr5	101976295	101976798	chr5:101976295-101976798	7	+	101976295	101976295	16724991	1	503,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	102131006	102131135	chr5:102131006-102131135	7	-	102131006	102131006	16724991	1	129,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	102144076	102146572	chr5:102144076-102146572	3	+	102144076	102144076	8553170	2	67,258,	0,2238,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	102233985	102296549	chr5:102233985-102296549	3	-	102236857	102296262	789624	13	3033,138,65,191,151,196,145,107,122,97,183,264,642,	0,5265,6732,13266,15652,23129,23957,26227,27926,29698,36638,57357,61922,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	102302503	102302810	chr5:102302503-102302810	3	+	102302503	102302503	8553170	1	307,	0,
#Partially deleted in new
chr5	102371781	102499016	chr5:102371781-102499016	3	-	102373351	102498844	789624	14	342,158,138,65,188,154,196,145,110,122,97,186,258,530,	0,1555,16906,19199,27773,41208,48044,66835,86600,87874,103915,105894,108395,126705,
#Deleted in new
chr5	102371787	102373429	chr5:102371787-102373429	0	-	102373351	102373429	789624	2	339,93,	0,1549,
#Partially deleted in new
chr5	102371944	102498979	chr5:102371944-102498979	1	-	102373351	102498844	789624	14	127,158,138,65,188,154,196,145,110,122,97,186,258,493,	0,1392,16743,19036,27610,41045,47881,66672,86437,87711,103752,105731,108232,126542,
#Partially deleted in new
chr5	102371944	102499016	chr5:102371944-102499016	1	-	102373351	102498844	789624	13	179,158,138,65,188,154,196,145,110,122,97,258,530,	0,1392,16743,19036,27610,41045,47881,66672,86437,87711,103752,108232,126542,
#Partially deleted in new
chr5	102371944	102391229	chr5:102371944-102391229	0	-	102371944	102371944	8553170	4	127,158,138,249,	0,1392,16743,19036,
#Partially deleted in new
chr5	102371945	102498913	chr5:102371945-102498913	1	-	102373351	102498844	789624	9	126,158,138,65,188,154,97,258,427,	0,1391,16742,19035,27609,41044,103751,108231,126541,
#Partially deleted in new
chr5	102419922	102498650	chr5:102419922-102498650	0	-	102419922	102419922	8553170	7	99,145,110,122,97,90,164,	0,18694,38459,39733,55774,60422,78564,
#Partially deleted in new
chr5	102438540	102477697	chr5:102438540-102477697	0	-	102438540	102438540	8553170	4	221,110,97,22,	0,19841,37156,39135,
#Partially deleted in new
chr5	102475721	102498810	chr5:102475721-102498810	0	-	102475721	102475721	8553170	4	72,15,258,324,	0,1954,4455,22765,
#Partially deleted in new
chr5	102500540	102505668	chr5:102500540-102505668	3	+	102500540	102500540	8553170	2	286,241,	0,4887,
#Partially deleted in new
chr5	102581367	102617589	chr5:102581367-102617589	3	+	102581367	102581367	789624	2	199,394,	0,35828,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	102605634	102606197	chr5:102605634-102606197	3	+	102605634	102605634	8553170	2	289,102,	0,461,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	102609155	102671559	chr5:102609155-102671559	0	-	102609155	102609155	8553170	2	611,333,	0,62071,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	102609259	102671307	chr5:102609259-102671307	3	-	102609259	102609259	789624	4	507,63,71,81,	0,2633,8598,61967,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	102609390	102671283	chr5:102609390-102671283	1	-	102609390	102609390	8553170	3	376,149,57,	0,26752,61836,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	102609556	102671464	chr5:102609556-102671464	0	-	102609556	102609556	789624	3	210,71,238,	0,8301,61670,
#Partially deleted in new
chr5	102753980	102866282	chr5:102753980-102866282	0	+	102866195	102866282	789624	2	110,460,	0,111842,
#Partially deleted in new
chr5	102754666	102865912	chr5:102754666-102865912	0	+	102754666	102754666	8553170	2	279,90,	0,111156,
#Partially deleted in new
chr5	102754782	102866080	chr5:102754782-102866080	0	+	102754782	102754782	8553170	2	566,258,	0,111040,
#Partially deleted in new
chr5	102755313	102838589	chr5:102755313-102838589	0	+	102755313	102755313	8553170	3	35,106,369,	0,82373,82907,
#Partially deleted in new
chr5	102755342	102866270	chr5:102755342-102866270	0	+	102866195	102866270	789624	2	127,448,	0,110480,
#Partially deleted in new
chr5	102808056	102946885	chr5:102808056-102946885	0	+	102808056	102808056	8553170	6	175,58,88,86,84,49,	0,93299,105877,116900,118528,138780,
#Partially deleted in new
chr5	102808062	102866192	chr5:102808062-102866192	0	+	102808062	102808062	8553170	2	169,370,	0,57760,
#Deleted in new
chr5	102864536	102867388	chr5:102864536-102867388	0	+	102866195	102867388	789624	3	31,462,116,	0,1286,2736,
#Deleted in new
chr5	102865243	102867309	chr5:102865243-102867309	0	+	102866195	102867309	789624	3	29,462,37,	0,579,2029,
#Deleted in new
chr5	102865309	102866280	chr5:102865309-102866280	0	+	102866195	102866280	789624	2	158,458,	0,513,
#Deleted in new
chr5	102865478	102867342	chr5:102865478-102867342	0	+	102866195	102867342	789624	3	32,462,70,	0,344,1794,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr5	102865725	103031105	chr5:102865725-103031105	1	+	102866195	103029065	789624	25	559,121,58,88,86,84,49,68,81,77,104,185,72,321,130,117,73,211,201,116,100,54,204,54,2219,	0,1547,35630,48208,59231,60859,81111,82652,83811,84176,84991,94149,95432,108390,124546,137307,139428,141075,141731,144025,151608,154064,159405,162459,163161,
#Partially deleted in new
chr5	102865736	103029244	chr5:102865736-103029244	1	+	102866195	103029065	789624	23	548,121,58,88,86,84,49,68,81,77,104,185,72,321,130,117,73,211,201,116,100,54,358,	0,1536,35619,48197,59220,60848,81100,82641,83800,84165,84980,94138,95421,108379,124535,137296,139417,141064,141720,144014,151597,154053,163150,
#Partially deleted in new
chr5	102865818	103029511	chr5:102865818-103029511	0	+	102866195	102948388	789624	24	466,121,88,86,84,49,68,81,77,104,185,72,321,130,117,73,211,201,116,100,54,201,54,625,	0,1454,48115,59138,60766,81018,82559,83718,84083,84898,94056,95339,108297,124453,137214,139335,140982,141638,143932,151515,153971,159315,162366,163068,
#Deleted in new
chr5	102865818	102873804	chr5:102865818-102873804	0	+	102865818	102865818	8553170	3	466,121,512,	0,1454,7474,
#Partially deleted in new
chr5	102865822	103029713	chr5:102865822-103029713	1	+	102866195	103029065	789624	24	462,121,58,88,86,84,49,68,81,77,104,185,72,130,117,73,211,201,116,100,54,204,54,827,	0,1450,35533,48111,59134,60762,81014,82555,83714,84079,84894,94052,95335,124449,137210,139331,140978,141634,143928,151511,153967,159308,162362,163064,
#Partially deleted in new
chr5	102866009	103029110	chr5:102866009-103029110	1	+	102866195	103029065	789624	25	275,121,58,88,86,84,49,68,81,77,104,185,72,321,130,117,73,211,201,116,100,54,204,57,224,	0,1263,35346,47924,58947,60575,80827,82368,83527,83892,84707,93865,95148,108106,124262,137023,139144,140791,141447,143741,151324,153780,159121,162172,162877,
#Partially deleted in new
chr5	102866115	103029165	chr5:102866115-103029165	3	+	102866195	103029065	789624	24	169,121,58,88,86,84,49,68,81,77,104,185,72,321,130,117,73,211,201,116,100,54,54,279,	0,1157,35240,47818,58841,60469,80721,82262,83421,83786,84601,93759,95042,108000,124156,136917,139038,140685,141341,143635,151218,153674,162069,162771,
#Partially deleted in new
chr5	102866586	102946876	chr5:102866586-102946876	0	+	102866586	102866586	8553170	7	130,121,58,88,86,84,40,	0,686,34769,47347,58370,59998,80250,
#Partially deleted in new
chr5	102895912	102949573	chr5:102895912-102949573	0	+	102895912	102895912	8553170	8	50,58,88,86,84,49,68,37,	0,5443,18021,29044,30672,50924,52465,53624,
#Partially deleted in new
chr5	102949576	103029594	chr5:102949576-103029594	0	+	102949576	103029065	789624	16	41,77,104,185,72,321,130,117,73,211,201,116,100,54,57,708,	0,325,1140,10298,11581,24539,40695,53456,55577,57224,57880,60174,67757,70213,78605,79310,
#Partially deleted in new
chr5	102959996	102974837	chr5:102959996-102974837	0	+	102959996	102959996	8553170	3	63,72,722,	0,1161,14119,
#Partially deleted in new
chr5	102989770	103006859	chr5:102989770-103006859	0	+	102989770	102989770	8553170	4	631,117,73,59,	0,13262,15383,17030,
#Partially deleted in new
chr5	103007452	103029267	chr5:103007452-103029267	0	+	103007452	103007452	8553170	5	205,116,54,54,381,	0,2298,12337,20732,21434,
#Partially deleted in new
chr5	103007541	103028222	chr5:103007541-103028222	0	+	103007541	103007541	8553170	6	116,116,100,54,204,41,	0,2209,9792,12248,17589,20640,
#Partially deleted in new
chr5	103007558	103029730	chr5:103007558-103029730	0	+	103007558	103029065	789624	6	99,116,100,54,204,844,	0,2192,9775,12231,17572,21328,
#Partially deleted in new
chr5	103007568	103029192	chr5:103007568-103029192	0	+	103007568	103007568	8553170	7	89,116,100,54,201,57,306,	0,2182,9765,12221,17565,20613,21318,
#Deleted in new
chr5	103032375	103033031	chr5:103032375-103033031	7	+	103032375	103032375	16724991	1	656,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	103085999	103120108	chr5:103085999-103120108	0	-	103104742	103108707	789624	7	2173,286,177,192,306,146,45,	0,10541,11314,11590,18541,22569,34064,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	103086332	103120151	chr5:103086332-103120151	3	-	103087897	103108707	789624	8	1840,286,177,192,306,194,146,88,	0,10208,10981,11257,18208,20383,22236,33731,
#Partially deleted in new
chr5	103087812	103120097	chr5:103087812-103120097	1	-	103088142	103108707	789624	5	360,306,194,146,34,	0,16728,18903,20756,32251,
#Partially deleted in new
chr5	103087814	103097693	chr5:103087814-103097693	0	-	103087814	103087814	8553170	2	358,104,	0,9775,
#Partially deleted in new
chr5	103088125	103120089	chr5:103088125-103120089	0	-	103104742	103108707	789624	4	47,306,146,26,	0,16415,20443,31938,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	103102275	103104621	chr5:103102275-103104621	0	-	103102275	103102275	8553170	2	468,81,	0,2265,
#Partially deleted in new
chr5	103106563	103120138	chr5:103106563-103120138	0	-	103106563	103106563	8553170	3	346,146,75,	0,2005,13500,
#Partially deleted in new
chr5	103120148	103133513	chr5:103120148-103133513	0	+	103129589	103133513	789624	3	46,398,61,	0,9157,13304,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr5	103120199	103212799	chr5:103120199-103212799	3	+	103129589	103201634	0	30	289,398,196,91,86,155,102,162,122,102,87,76,110,86,126,122,183,142,224,128,115,108,117,168,174,73,120,141,126,11278,	0,9106,13253,16532,18184,26327,27731,28952,31053,32448,33648,34470,34634,35709,37988,38252,38946,46979,47872,52955,53658,57467,57664,59821,63034,64472,66120,70642,74700,81322,
#Partially deleted in new
chr5	103120253	103158289	chr5:103120253-103158289	0	+	103120412	103158289	789624	13	235,91,86,155,102,162,122,102,87,76,110,86,102,	0,16478,18130,26273,27677,28898,30999,32394,33594,34416,34580,35655,37934,
#Partially deleted in new
chr5	103120263	103203206	chr5:103120263-103203206	1	+	103129589	103201634	0	31	225,398,196,91,86,155,102,162,122,102,87,76,110,86,126,122,183,142,224,128,115,108,117,168,174,73,120,63,141,126,1685,	0,9042,13189,16468,18120,26263,27667,28888,30989,32384,33584,34406,34570,35645,37924,38188,38882,46915,47808,52891,53594,57403,57600,59757,62970,64408,66056,67050,70578,74636,81258,
#Partially deleted in new
chr5	103120389	103202347	chr5:103120389-103202347	1	+	103129589	103201634	789624	33	99,398,196,91,86,155,102,162,122,102,87,76,110,86,126,122,183,142,224,128,115,45,108,117,168,174,73,120,63,60,141,126,826,	0,8916,13063,16342,17994,26137,27541,28762,30863,32258,33458,34280,34444,35519,37798,38062,38756,46789,47682,52765,53468,56476,57277,57474,59631,62844,64282,65930,66924,68777,70452,74510,81132,
#Partially deleted in new
chr5	103120607	103146591	chr5:103120607-103146591	0	+	103136799	103146591	789624	4	231,91,86,65,	0,16124,17776,25919,
#Partially deleted in new
chr5	103129305	103203523	chr5:103129305-103203523	1	+	103129589	103201634	0	29	398,196,91,86,155,102,162,122,102,87,76,110,86,126,122,183,142,224,128,115,108,117,168,174,73,120,141,126,2002,	0,4147,7426,9078,17221,18625,19846,21947,23342,24542,25364,25528,26603,28882,29146,29840,37873,38766,43849,44552,48361,48558,50715,53928,55366,57014,61536,65594,72216,
#Partially deleted in new
chr5	103129305	103203523	chr5:103129305-103203523	1	+	103129589	103201634	789624	32	398,196,91,86,155,102,162,122,102,87,76,110,86,126,122,183,142,224,128,115,45,108,117,168,174,73,120,63,60,141,126,2002,	0,4147,7426,9078,17221,18625,19846,21947,23342,24542,25364,25528,26603,28882,29146,29840,37873,38766,43849,44552,47560,48361,48558,50715,53928,55366,57014,58008,59861,61536,65594,72216,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	103133548	103148300	chr5:103133548-103148300	0	+	103133548	103148247	789624	6	100,91,86,155,102,149,	0,3183,4835,12978,14382,14603,
#Partially deleted in new
chr5	103168187	103203236	chr5:103168187-103203236	0	+	103168187	103201634	789624	10	108,128,115,108,117,168,73,141,126,1715,	0,4967,5670,9479,9676,11833,16484,22654,26712,33334,
#Deleted in new
chr5	103173253	103174191	chr5:103173253-103174191	0	+	103173253	103173253	8553170	2	29,334,	0,604,
#Partially deleted in new
chr5	103173862	103188894	chr5:103173862-103188894	0	+	103173862	103173862	8553170	8	110,108,117,168,73,120,63,304,	0,3804,4001,6158,10809,12457,13451,14728,
#Partially deleted in new
chr5	103173946	103201613	chr5:103173946-103201613	0	+	103173946	103201613	789624	10	26,45,108,117,168,174,73,141,126,92,	0,2919,3720,3917,6074,9287,10725,16895,20953,27575,
#Partially deleted in new
chr5	103177918	103201533	chr5:103177918-103201533	0	+	103177918	103201533	789624	8	62,168,73,120,63,141,126,12,	0,2102,6753,8401,9395,12923,16981,23603,
#Deleted in new
chr5	103184242	103191058	chr5:103184242-103191058	0	+	103184242	103184242	8553170	2	502,217,	0,6599,
#Partially deleted in new
chr5	103194780	103201669	chr5:103194780-103201669	0	+	103194780	103194780	8553170	2	245,148,	0,6741,
#Partially deleted in new
chr5	103246047	103253519	chr5:103246047-103253519	3	-	103246047	103246047	8553170	2	293,192,	0,7280,
#Partially deleted in new
chr5	103258701	103278660	chr5:103258701-103278660	3	+	103275919	103276540	789624	3	195,90,2764,	0,7206,17195,
#Partially deleted in new
chr5	103259035	103277228	chr5:103259035-103277228	1	+	103275919	103276540	789624	3	151,90,1332,	0,6872,16861,
#Partially deleted in new
chr5	103259423	103278371	chr5:103259423-103278371	1	+	103275919	103276540	789624	3	368,90,2475,	0,6484,16473,
#Deleted in new
chr5	103408940	103412511	chr5:103408940-103412511	3	-	103408940	103408940	8553170	2	447,108,	0,3463,
#Partially deleted in new
chr5	103430405	103461343	chr5:103430405-103461343	5	-	103430405	103430405	16724991	5	230,136,189,43,124,	0,2082,13346,15413,30814,
#Partially deleted in new
chr5	103430532	103526618	chr5:103430532-103526618	7	-	103430532	103430532	16724991	10	103,136,189,43,158,179,111,168,192,504,	0,1955,13219,15286,17123,55211,68522,79565,89132,95582,
#Partially deleted in new
chr5	103447780	103499096	chr5:103447780-103499096	4	-	103447780	103447780	16724991	3	33,179,42,	0,37963,51274,
#Partially deleted in new
chr5	103473334	103485879	chr5:103473334-103485879	4	-	103473334	103473334	16724991	2	223,136,	0,12409,
#Partially deleted in new
chr5	103528433	103541985	chr5:103528433-103541985	3	-	103528433	103528433	789624	5	28,91,92,89,132,	0,1270,1883,12509,13420,
#Partially deleted in new
chr5	103548854	103562793	chr5:103548854-103562793	3	-	103550860	103560248	789624	7	2117,200,114,168,590,212,91,	0,3362,5885,7076,10024,11188,13848,
#Partially deleted in new
chr5	103550507	103562789	chr5:103550507-103562789	1	-	103550860	103560248	789624	7	464,200,114,168,590,158,87,	0,1709,4232,5423,8371,9589,12195,
#Deleted in new
chr5	103554501	103556089	chr5:103554501-103556089	0	-	103554501	103554501	8553170	2	352,159,	0,1429,
#Deleted in new
chr5	103559404	103562790	chr5:103559404-103562790	0	-	103559404	103559404	8553170	2	846,88,	0,3298,
#Partially deleted in new
chr5	103880128	103891393	chr5:103880128-103891393	3	-	103880128	103880128	8553170	3	1836,127,62,	0,6212,11203,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	103880198	103891368	chr5:103880198-103891368	0	-	103880198	103880198	8553170	2	6269,37,	0,11133,
#Partially deleted in new
chr5	103880320	103891360	chr5:103880320-103891360	1	-	103880320	103880320	8553170	3	1644,93,29,	0,6054,11011,
#Partially deleted in new
chr5	103880890	103885865	chr5:103880890-103885865	1	-	103880890	103880890	8553170	3	1074,1554,86,	0,3063,4889,
#Partially deleted in new
chr5	103881618	103888129	chr5:103881618-103888129	1	-	103881618	103881618	8553170	4	346,127,194,36,	0,4722,5489,6475,
#Partially deleted in new
chr5	103886163	103891370	chr5:103886163-103891370	0	-	103886163	103886163	8553170	4	304,194,91,39,	0,944,1930,5168,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	104098873	104099038	chr5:104098873-104099038	3	+	104098873	104098873	8553170	1	165,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	104260530	104260826	chr5:104260530-104260826	3	-	104260530	104260530	8553170	1	296,	0,
#Partially deleted in new
chr5	104383297	104910733	chr5:104383297-104910733	0	-	104383297	104383297	8553170	3	85,118,72,	0,503560,527364,
#Deleted in new
chr5	104434771	104435499	chr5:104434771-104435499	3	+	104434771	104434771	8553170	1	728,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	104484203	105392970	chr5:104484203-105392970	1	-	104484203	104484203	8553170	3	449,118,210,	0,402654,908557,
#Partially deleted in new
chr5	104630386	104773822	chr5:104630386-104773822	1	-	104630386	104630386	8553170	3	270,104,90,	0,132893,143346,
#Partially deleted in new
chr5	104630535	104773791	chr5:104630535-104773791	2	-	104630535	104630535	8553170	3	121,104,179,	0,132744,143077,
#Partially deleted in new
chr5	104739253	104773696	chr5:104739253-104773696	1	-	104739253	104739253	8553170	4	159,139,104,84,	0,243,24026,34359,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	104743691	104773660	chr5:104743691-104773660	1	-	104743691	104743691	8553170	4	163,157,104,48,	0,343,19588,29921,
#Partially deleted in new
chr5	104763230	104773784	chr5:104763230-104773784	0	-	104763230	104763230	8553170	2	153,172,	0,10382,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	104773640	104799772	chr5:104773640-104799772	3	+	104773640	104773640	8553170	2	100,467,	0,25665,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	104780287	104780389	chr5:104780287-104780389	3	-	104780287	104780287	8553170	1	102,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	104917491	105008917	chr5:104917491-105008917	3	-	104917491	104917491	8553170	2	407,57,	0,91369,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	104973286	105246364	chr5:104973286-105246364	1	-	104973286	104973286	8553170	5	372,212,86,51,68,	0,2387,6404,35574,273010,
#Deleted in new
chr5	105099472	105100098	chr5:105099472-105100098	7	+	105099472	105099472	16724991	1	626,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	105922993	105923108	chr5:105922993-105923108	7	-	105922993	105922993	16724991	1	115,	0,
#Deleted in new
chr5	106415575	106417241	chr5:106415575-106417241	7	-	106415575	106415575	16724991	1	1666,	0,
#Partially deleted in new
chr5	106543065	106544330	chr5:106543065-106544330	7	-	106543065	106543065	16724991	1	1265,	0,
#Partially deleted in new
chr5	106546664	106546803	chr5:106546664-106546803	3	+	106546664	106546664	8553170	1	139,	0,
#Duplicated in new
chr5	106815204	106980869	chr5:106815204-106980869	1	-	106815204	106815204	8553170	3	342,154,106,	0,28856,165559,
#Deleted in new
chr5	107195155	107195332	chr5:107195155-107195332	7	+	107195155	107195155	16724991	1	177,	0,
#Partially deleted in new
chr5	107376888	107670895	chr5:107376888-107670895	3	-	107381254	107670613	0	5	4488,81,66,293,407,	0,10346,10817,50328,293600,
#Partially deleted in new
chr5	107376888	107427514	chr5:107376888-107427514	1	-	107381254	107427514	789624	4	4488,81,66,298,	0,10346,10817,50328,
#Partially deleted in new
chr5	107380983	107388553	chr5:107380983-107388553	0	-	107380983	107380983	8553170	4	393,81,66,66,	0,6251,6722,7504,
#Partially deleted in new
chr5	107381237	107670627	chr5:107381237-107670627	1	-	107381254	107670613	789624	4	139,66,293,139,	0,6468,45979,289251,
#Partially deleted in new
chr5	107426975	107670885	chr5:107426975-107670885	0	-	107426975	107426975	8553170	2	534,397,	0,243513,
#Partially deleted in new
chr5	107427216	107506191	chr5:107427216-107506191	0	-	107427216	107427216	8553170	2	293,56,	0,78919,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	107699834	107716706	chr5:107699834-107716706	3	-	107699834	107699834	8553170	5	358,125,100,148,74,	0,2348,5367,10526,16798,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	107699956	107716841	chr5:107699956-107716841	0	-	107699956	107699956	8553170	5	236,125,76,148,209,	0,2226,8930,10404,16676,
#Deleted in new
chr5	107724960	107727117	chr5:107724960-107727117	7	+	107724960	107724960	16724991	1	2157,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	107734772	107735066	chr5:107734772-107735066	3	-	107734772	107734772	8553170	1	294,	0,
#Deleted in new
chr5	107810628	107810924	chr5:107810628-107810924	3	+	107810628	107810628	8553170	1	296,	0,
#Partially deleted in new
chr5	107859034	108381410	chr5:107859034-108381410	1	-	107861719	108364917	789624	9	2826,143,77,131,108,132,258,123,712,	0,22002,161890,327082,365086,489364,505703,508796,521664,
#Partially deleted in new
chr5	107859044	108382098	chr5:107859044-108382098	3	-	107861719	108381691	789624	9	2816,143,77,131,108,132,258,123,1400,	0,21992,161880,327072,365076,489354,505693,508786,521654,
#Partially deleted in new
chr5	107859052	108381109	chr5:107859052-108381109	1	-	107861719	108381109	789624	10	2808,143,77,131,108,132,258,123,225,54,	0,21984,161872,327064,365068,489346,505685,508778,521646,522003,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	107878236	108367954	chr5:107878236-108367954	1	-	107880862	108364917	789624	7	2943,77,131,108,132,258,124,	0,142688,307880,345884,470162,486501,489594,
#Partially deleted in new
chr5	108020798	108364767	chr5:108020798-108364767	0	-	108020798	108020798	8553170	5	203,131,108,132,30,	0,165318,203322,327600,343939,
#Partially deleted in new
chr5	108364822	108380963	chr5:108364822-108380963	0	-	108364822	108364822	8553170	3	173,123,265,	0,3008,15876,
#Deleted in new
chr5	108593608	108593967	chr5:108593608-108593967	7	+	108593608	108593608	16724991	1	359,	0,
#Deleted in new
chr5	108727824	108728260	chr5:108727824-108728260	3	-	108727824	108727824	789624	1	436,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr5	108747821	109196841	chr5:108747821-109196841	3	+	108798182	109187575	0	20	179,146,266,174,100,184,138,120,123,190,93,204,123,57,116,95,124,155,123,9409,	0,20271,50302,84948,87886,119945,123543,124271,135574,149837,198308,206907,211403,289600,296858,299282,352574,432925,438378,439611,
#Partially deleted in new
chr5	108747840	108832924	chr5:108747840-108832924	0	+	108747840	108747840	8553170	3	160,266,155,	0,50283,84929,
#Partially deleted in new
chr5	108748398	108832820	chr5:108748398-108832820	0	+	108748398	108748398	8553170	3	235,266,51,	0,49725,84371,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr5	108748961	109188275	chr5:108748961-109188275	0	+	108798182	108867814	789624	18	32,146,266,184,138,120,123,190,93,204,123,57,116,95,124,155,123,843,	0,19131,49162,118805,122403,123131,134434,148697,197168,205767,210263,288460,295718,298142,351434,431785,437238,438471,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	108748966	108843001	chr5:108748966-108843001	0	+	108748966	108748966	8553170	8	27,146,93,266,174,100,38,740,	0,19126,33696,49157,83803,86741,92864,93295,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	108784097	108785552	chr5:108784097-108785552	7	+	108784097	108784097	16724991	2	403,545,	0,910,
#Partially deleted in new
chr5	108798113	108835920	chr5:108798113-108835920	1	+	108798182	108835920	789624	4	276,174,100,8,	0,34656,37594,37799,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	108818040	108830790	chr5:108818040-108830790	3	-	108818040	108818040	8553170	2	220,178,	0,12572,
#Partially deleted in new
chr5	108894346	108894628	chr5:108894346-108894628	7	-	108894346	108894346	16724991	1	282,	0,
#Partially deleted in new
chr5	108897647	109187672	chr5:108897647-109187672	1	+	108897845	109187575	789624	11	201,93,204,123,57,116,95,124,155,123,240,	0,48482,57081,61577,139774,147032,149456,202748,283099,288552,289785,
#Partially deleted in new
chr5	108924605	109187578	chr5:108924605-109187578	1	+	108924660	109187575	0	11	184,93,204,123,57,116,95,124,155,123,146,	0,21524,30123,34619,112816,120074,122498,175790,256141,261594,262827,
#Partially deleted in new
chr5	108924607	109044826	chr5:108924607-109044826	0	+	108924607	108924607	8553170	6	182,93,204,123,57,147,	0,21522,30121,34617,112814,120072,
#Partially deleted in new
chr5	109051314	109052457	chr5:109051314-109052457	7	-	109051314	109051314	16724991	1	1143,	0,
#Partially deleted in new
chr5	109177516	109187667	chr5:109177516-109187667	0	+	109177516	109177516	8553170	4	113,155,123,235,	0,3230,8683,9916,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	109237119	109326369	chr5:109237119-109326369	3	-	109237119	109237119	789624	4	999,877,221,3374,	0,82639,84274,85876,
#Partially deleted in new
chr5	109334708	109409994	chr5:109334708-109409994	3	-	109337230	109383433	789624	10	2648,122,115,112,183,186,1051,201,118,153,	0,9481,9996,21206,28131,33852,43495,46794,48694,75133,
#Partially deleted in new
chr5	109334712	109383433	chr5:109334712-109383433	1	-	109337230	109383433	789624	9	2644,122,115,112,183,186,1051,201,31,	0,9477,9992,21202,28127,33848,43491,46790,48690,
#Partially deleted in new
chr5	109379166	109409316	chr5:109379166-109409316	0	-	109379166	109379166	8553170	4	88,201,118,173,	0,2336,4236,29977,
#Partially deleted in new
chr5	109383395	109409314	chr5:109383395-109409314	0	-	109383395	109383395	8553170	3	125,121,198,	0,7242,25721,
#Partially deleted in new
chr5	109448348	109449063	chr5:109448348-109449063	7	-	109448348	109448348	16724991	2	332,71,	0,644,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	109467352	109467952	chr5:109467352-109467952	3	+	109467352	109467352	8553170	1	600,	0,
#Deleted in new
chr5	109470842	109471586	chr5:109470842-109471586	3	+	109470842	109470842	8553170	1	744,	0,
#Partially deleted in new
chr5	109497876	109499108	chr5:109497876-109499108	3	+	109497876	109497876	8553170	2	224,342,	0,890,
#Partially deleted in new
chr5	109588337	109589592	chr5:109588337-109589592	7	+	109588337	109588337	16724991	1	1255,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	109687801	109688329	chr5:109687801-109688329	3	-	109687801	109687801	8553170	1	528,	0,
#Partially deleted in new
chr5	109689365	109867178	chr5:109689365-109867178	3	+	109690417	109866998	789624	22	1187,255,145,172,128,174,187,178,203,183,115,68,166,219,123,115,134,142,134,195,111,333,	0,24154,26754,39976,65963,78169,80989,85422,92030,95378,99568,100094,127907,130303,130854,134357,152962,156499,158291,165774,175670,177480,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	109699499	109699834	chr5:109699499-109699834	3	-	109699499	109699499	8553170	1	335,	0,
#Partially deleted in new
chr5	109794174	109819887	chr5:109794174-109819887	0	+	109794174	109794174	8553170	3	63,166,219,	0,23098,25494,
#Partially deleted in new
chr5	109804175	109820278	chr5:109804175-109820278	0	+	109804175	109804175	8553170	4	102,166,219,59,	0,13097,15493,16044,
#Deleted in new
chr5	109840127	109840692	chr5:109840127-109840692	7	-	109840127	109840127	16724991	1	565,	0,
#Partially deleted in new
chr5	109853580	109867173	chr5:109853580-109867173	0	+	109853580	109853580	8553170	3	1754,111,328,	0,11455,13265,
#Partially deleted in new
chr5	109854921	109865415	chr5:109854921-109865415	0	+	109854921	109854921	8553170	2	413,380,	0,10114,
#Deleted in new
chr5	109862327	109869625	chr5:109862327-109869625	0	+	109862327	109862327	8553170	2	2819,2780,	0,4518,
#Deleted in new
chr5	109883181	109884751	chr5:109883181-109884751	3	+	109883181	109883181	789624	3	103,100,315,	0,689,1255,
#Deleted in new
chr5	109884609	109885423	chr5:109884609-109885423	7	-	109884609	109884609	16724991	1	814,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	110289232	110430101	chr5:110289232-110430101	0	-	110289232	110289232	8553170	9	208,104,297,94,302,225,82,94,214,	0,31983,34001,98033,98519,101183,108540,135590,140655,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	110329726	110625597	chr5:110329726-110625597	0	-	110329726	110329726	8553170	6	3199,179,250,124,134,331,	0,238720,275382,276437,288702,295540,
#Partially deleted in new
chr5	110417677	110726671	chr5:110417677-110726671	0	-	110417677	110417677	8553170	13	502,260,94,179,250,124,134,167,100,158,106,112,45,	0,2819,7145,150769,187431,188486,200751,207589,210103,220520,223213,224582,308949,
#Partially deleted in new
chr5	110420103	110726665	chr5:110420103-110726665	3	-	110420579	110667352	789624	14	653,94,248,179,250,124,134,167,100,158,106,112,137,39,	0,4719,108484,148343,185005,186060,198325,205163,207677,218094,220787,222156,247124,306523,
#Partially deleted in new
chr5	110420110	110726671	chr5:110420110-110726671	0	-	110627825	110667352	789624	11	646,94,179,250,124,98,134,167,100,137,45,	0,4712,148336,184998,186053,190392,198318,205156,207670,247117,306516,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	110513828	110513915	chr5:110513828-110513915	3	-	110513828	110513828	5263520	1	87,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	110568494	110628941	chr5:110568494-110628941	0	-	110568494	110568494	8553170	6	131,250,124,90,134,51,	0,36614,37669,49399,49934,60396,
#Partially deleted in new
chr5	110625291	110726658	chr5:110625291-110726658	0	-	110625291	110667352	789624	8	142,100,158,106,112,137,35,32,	0,2489,12906,15599,16968,41936,42403,101335,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	110638206	110738956	chr5:110638206-110738956	0	-	110638206	110667352	789624	7	149,106,112,137,172,113,235,	0,2684,4053,29021,88420,96696,100515,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	110640875	110738091	chr5:110640875-110738091	0	-	110640875	110667352	789624	5	121,112,137,113,99,	0,1384,26352,94027,97117,
#Partially deleted in new
chr5	110666645	110726705	chr5:110666645-110726705	0	-	110666645	110666645	8553170	3	221,137,79,	0,582,59981,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	110666767	110738918	chr5:110666767-110738918	0	-	110666767	110666767	8553170	4	99,137,113,197,	0,460,68135,71954,
#Partially deleted in new
chr5	110667227	110726671	chr5:110667227-110726671	0	-	110667227	110667227	8553170	3	137,351,45,	0,53298,59399,
#Partially deleted in new
chr5	110684793	110684927	chr5:110684793-110684927	3	-	110684793	110684793	8553170	1	134,	0,
#Partially deleted in new
chr5	110720549	110726671	chr5:110720549-110726671	0	-	110720549	110720549	8553170	3	327,230,45,	0,5042,6077,
#Partially deleted in new
chr5	110738135	110757031	chr5:110738135-110757031	0	+	110738135	110738135	8553170	8	112,43,58,78,101,57,58,51,	0,3911,5594,8133,10027,17329,18566,18845,
#Partially deleted in new
chr5	110738160	110762267	chr5:110738160-110762267	1	+	110748186	110761782	789624	8	87,43,58,78,101,57,58,1064,	0,3886,5569,8108,10002,17304,18541,23043,
#Partially deleted in new
chr5	110738993	110762784	chr5:110738993-110762784	3	+	110739119	110761782	789624	8	409,43,58,78,101,57,58,1581,	0,3053,4736,7275,9169,16471,17708,22210,
#Partially deleted in new
chr5	110739040	110762264	chr5:110739040-110762264	1	+	110739119	110761782	789624	8	362,43,58,78,101,57,58,818,	0,3006,4689,7228,9122,16424,17661,22406,
#Partially deleted in new
chr5	110741677	110762784	chr5:110741677-110762784	1	+	110746322	110761782	789624	7	412,58,78,101,57,58,1581,	0,2052,4591,6485,13787,15024,19526,
#Partially deleted in new
chr5	110745568	110761655	chr5:110745568-110761655	0	+	110745568	110745568	8553170	5	778,101,57,58,452,	0,2594,9896,11133,15635,
#Partially deleted in new
chr5	110753301	110765161	chr5:110753301-110765161	0	+	110753301	110753301	8553170	3	2220,58,3958,	0,3400,7902,
#Partially deleted in new
chr5	110755119	110762213	chr5:110755119-110762213	1	+	110756720	110761782	789624	4	402,126,58,1010,	0,876,1582,6084,
#Deleted in new
chr5	110908283	110908713	chr5:110908283-110908713	7	+	110908283	110908283	16724991	1	430,	0,
#Partially deleted in new
chr5	110948028	110950780	chr5:110948028-110950780	7	-	110948028	110948028	16724991	1	2752,	0,
#Deleted in new
chr5	110983562	110984466	chr5:110983562-110984466	7	-	110983562	110983562	16724991	1	904,	0,
#Partially deleted in new
chr5	111070061	111076793	chr5:111070061-111076793	1	+	111071483	111076074	789624	5	1456,137,45,135,848,	0,1863,2826,3449,5884,
#Partially deleted in new
chr5	111071691	111076131	chr5:111071691-111076131	3	+	111071890	111076074	0	4	370,45,135,186,	0,1196,1819,4254,
#Partially deleted in new
chr5	111073313	111078024	chr5:111073313-111078024	1	+	111073582	111076074	0	2	332,2079,	0,2632,
#Partially deleted in new
chr5	111076920	111092115	chr5:111076920-111092115	3	-	111076920	111076920	8553170	4	125,105,166,46,	0,451,7437,15149,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr5	111091715	111130502	chr5:111091715-111130502	3	+	111092288	111126883	789624	23	903,28,101,118,133,55,133,176,121,66,87,146,115,166,109,80,108,98,146,120,82,188,3769,	0,3204,5363,7006,8873,10629,12070,12461,12981,13579,14341,15578,18473,19072,19454,21358,27297,28780,29280,32089,32392,33892,35018,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr5	111092171	111130502	chr5:111092171-111130502	1	+	111092288	111126883	789624	23	447,28,101,118,133,55,133,176,121,66,87,146,115,166,109,80,108,98,146,120,82,188,3769,	0,2748,4907,6550,8417,10173,11614,12005,12525,13123,13885,15122,18017,18616,18998,20902,26841,28324,28824,31633,31936,33436,34562,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr5	111092313	111127192	chr5:111092313-111127192	1	+	111092456	111126883	789624	23	305,28,101,118,133,55,133,176,121,66,87,146,115,166,109,80,108,98,146,120,82,188,459,	0,2606,4765,6408,8275,10031,11472,11863,12383,12981,13743,14980,17875,18474,18856,20760,26699,28182,28682,31491,31794,33294,34420,
#Partially deleted in new
chr5	111092320	111111552	chr5:111092320-111111552	0	+	111092320	111092320	8553170	15	298,28,101,118,133,55,133,176,121,66,87,146,115,166,383,	0,2599,4758,6401,8268,10024,11465,11856,12376,12974,13736,14973,17868,18467,18849,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	111092346	111095209	chr5:111092346-111095209	0	+	111092346	111092346	8553170	2	272,290,	0,2573,
#Partially deleted in new
chr5	111097006	111103860	chr5:111097006-111103860	0	+	111097006	111097006	8553170	5	173,118,133,55,75,	0,1715,3582,5338,6779,
#Partially deleted in new
chr5	111155243	111156152	chr5:111155243-111156152	7	-	111155243	111155243	16724991	3	180,164,114,	0,483,795,
#Deleted in new
chr5	111192225	111193042	chr5:111192225-111193042	7	-	111192225	111192225	16724991	1	817,	0,
#Partially deleted in new
chr5	111223652	111394749	chr5:111223652-111394749	0	+	111224483	111394749	789624	6	54,238,79,63,83,40,	0,754,120371,151197,153207,171057,
#Partially deleted in new
chr5	111223949	111484585	chr5:111223949-111484585	1	+	111224483	111484466	0	12	22,238,79,63,83,73,91,75,76,127,153,560,	0,457,120074,150900,152910,170760,222736,225179,249361,254431,258835,260076,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	111224085	111494886	chr5:111224085-111494886	3	+	111224483	111484466	0	11	559,79,63,83,73,91,75,76,127,153,10861,	0,119938,150764,152774,170624,222600,225043,249225,254295,258699,259940,
#Partially deleted in new
chr5	111224381	111449193	chr5:111224381-111449193	0	+	111224483	111394736	789624	5	263,79,73,91,65,	0,119642,170328,222304,224747,
#Partially deleted in new
chr5	111224381	111484766	chr5:111224381-111484766	0	+	111224483	111394736	789624	9	263,79,73,91,75,76,127,153,741,	0,119642,170328,222304,224747,248929,253999,258403,259644,
#Partially deleted in new
chr5	111224385	111416547	chr5:111224385-111416547	0	+	111224385	111224385	8553170	6	259,79,63,83,73,42,	0,119638,150464,152474,170324,192120,
#Partially deleted in new
chr5	111224408	111482816	chr5:111224408-111482816	0	+	111224483	111394736	789624	9	236,79,63,73,91,75,76,127,32,	0,119615,150441,170301,222277,224720,248902,253972,258376,
#Partially deleted in new
chr5	111224463	111365230	chr5:111224463-111365230	0	+	111224463	111224463	8553170	3	181,79,288,	0,119560,140479,
#Partially deleted in new
chr5	111265808	111270089	chr5:111265808-111270089	3	-	111265808	111265808	8553170	2	323,115,	0,4166,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	111277516	111302567	chr5:111277516-111302567	3	-	111277516	111277516	8553170	3	64,144,357,	0,5376,24694,
#Partially deleted in new
chr5	111357960	111473324	chr5:111357960-111473324	0	+	111357960	111357960	8553170	7	164,63,83,73,91,75,14,	0,16889,18899,36749,88725,91168,115350,
#Partially deleted in new
chr5	111357984	111449884	chr5:111357984-111449884	0	+	111357984	111357984	8553170	7	140,63,83,73,91,75,263,	0,16865,18875,36725,88701,91144,91637,
#Deleted in new
chr5	111481947	111485595	chr5:111481947-111485595	0	+	111481947	111481947	8553170	2	990,1570,	0,2078,
#Deleted in new
chr5	111482451	111484598	chr5:111482451-111484598	0	+	111482451	111482451	8553170	3	56,153,573,	0,333,1574,
#Partially deleted in new
chr5	111482487	111489712	chr5:111482487-111489712	0	+	111482487	111482487	8553170	4	20,153,507,123,	0,297,1538,7102,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	111496032	111512510	chr5:111496032-111512510	3	-	111499885	111507433	789624	6	4074,115,127,50,114,126,	0,4969,5929,10297,11296,16352,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	111496946	111512535	chr5:111496946-111512535	1	-	111501103	111507433	789624	5	3160,31,50,114,145,	0,4139,9383,10382,15444,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	111499401	111512535	chr5:111499401-111512535	0	-	111501103	111507433	789624	5	705,115,50,114,151,	0,1600,6928,7927,12983,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	111499584	111512535	chr5:111499584-111512535	0	-	111499584	111499584	8553170	4	522,115,50,151,	0,1417,6745,12800,
#Partially deleted in new
chr5	111499881	111512562	chr5:111499881-111512562	1	-	111499885	111507433	789624	6	225,115,127,50,114,172,	0,1120,2080,6448,7447,12509,
#Partially deleted in new
chr5	111500146	111512590	chr5:111500146-111512590	1	-	111500918	111507433	789624	5	970,127,50,114,206,	0,1815,6183,7182,12238,
#Partially deleted in new
chr5	111500245	111512535	chr5:111500245-111512535	1	-	111501103	111507433	789624	4	871,50,114,151,	0,6084,7083,12139,
#Partially deleted in new
chr5	111500463	111512535	chr5:111500463-111512535	0	-	111500463	111500463	789624	4	653,127,50,151,	0,1498,5866,11921,
#Partially deleted in new
chr5	111500608	111512535	chr5:111500608-111512535	0	-	111500608	111500608	8553170	3	508,50,151,	0,5721,11776,
#Partially deleted in new
chr5	111500630	111512471	chr5:111500630-111512471	0	-	111500630	111500630	8553170	5	486,29,50,114,87,	0,4384,5699,6698,11754,
#Partially deleted in new
chr5	111500987	111512512	chr5:111500987-111512512	0	-	111502065	111507433	789624	6	129,127,29,50,114,128,	0,974,4027,5342,6341,11397,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	111506215	111512510	chr5:111506215-111512510	0	-	111506215	111506215	8553170	3	164,114,126,	0,1113,6169,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	111512225	111739726	chr5:111512225-111739726	3	+	111512225	111512225	789624	7	283,217,122,224,190,3066,1423,	0,157193,215719,216311,217265,219555,226078,
#Deleted in new
chr5	111572101	111572239	chr5:111572101-111572239	7	-	111572101	111572101	16724991	1	138,	0,
#Deleted in new
chr5	111572235	111572398	chr5:111572235-111572398	7	+	111572235	111572235	16724991	1	163,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	111662620	111757194	chr5:111662620-111757194	0	-	111677981	111755772	789624	6	3121,170,75,78,61,59,	0,7114,15319,72809,93149,94515,
#Partially deleted in new
chr5	111669190	111757194	chr5:111669190-111757194	1	-	111677981	111755772	789624	5	714,75,78,61,59,	0,8749,66239,86579,87945,
#Deleted in new
chr5	111719768	111720061	chr5:111719768-111720061	3	-	111719768	111719768	8553170	1	293,	0,
#Partially deleted in new
chr5	111728811	111757724	chr5:111728811-111757724	1	-	111730920	111755772	789624	5	2235,78,61,44,163,	0,6618,26958,28324,28750,
#Partially deleted in new
chr5	111729295	111757258	chr5:111729295-111757258	1	-	111730920	111755772	789624	4	1751,78,61,123,	0,6134,26474,27840,
#Partially deleted in new
chr5	111729302	111756251	chr5:111729302-111756251	1	-	111730920	111755772	789624	3	1744,78,482,	0,6127,26467,
#Partially deleted in new
chr5	111729315	111757470	chr5:111729315-111757470	1	-	111730920	111755772	789624	5	1731,78,61,44,151,	0,6114,26454,27820,28004,
#Partially deleted in new
chr5	111729983	111976931	chr5:111729983-111976931	1	-	111730920	111976739	789624	4	1063,78,105,222,	0,5446,245290,246726,
#Deleted in new
chr5	111730388	111732181	chr5:111730388-111732181	0	+	111730388	111730388	8553170	2	122,401,	0,1392,
#Partially deleted in new
chr5	111730516	111757194	chr5:111730516-111757194	1	-	111734715	111755772	789624	5	530,73,78,61,59,	0,4153,4913,25253,26619,
#Partially deleted in new
chr5	111730641	111757229	chr5:111730641-111757229	0	-	111730641	111730641	8553170	3	405,78,94,	0,4788,26494,
#Partially deleted in new
chr5	111730657	111758070	chr5:111730657-111758070	1	-	111734715	111755772	789624	6	389,73,78,61,44,126,	0,4012,4772,25112,26478,27287,
#Partially deleted in new
chr5	111730690	111997464	chr5:111730690-111997464	3	-	111730920	111755772	789624	4	356,78,61,141,	0,4739,25079,266633,
#Partially deleted in new
chr5	111730703	111757555	chr5:111730703-111757555	1	-	111730920	111755772	789624	5	343,78,61,44,178,	0,4726,25066,26432,26674,
#Partially deleted in new
chr5	111730723	111757409	chr5:111730723-111757409	1	-	111730920	111755772	789624	5	323,78,61,44,81,	0,4706,25046,26412,26605,
#Partially deleted in new
chr5	111730746	111757401	chr5:111730746-111757401	1	-	111730920	111755772	789624	5	300,78,61,38,82,	0,4683,25023,26389,26573,
#Partially deleted in new
chr5	111730805	111758218	chr5:111730805-111758218	1	-	111730920	111755772	789624	5	241,78,61,44,274,	0,4624,24964,26330,27139,
#Partially deleted in new
chr5	111730867	111757643	chr5:111730867-111757643	1	-	111730920	111755772	789624	5	179,78,157,44,82,	0,4562,24902,26268,26694,
#Partially deleted in new
chr5	111730931	111758094	chr5:111730931-111758094	0	-	111730931	111755772	789624	5	115,78,157,44,163,	0,4498,24838,26204,27000,
#Partially deleted in new
chr5	111730953	111756251	chr5:111730953-111756251	0	-	111730953	111730953	8553170	3	93,78,482,	0,4476,24816,
#Partially deleted in new
chr5	111731026	111758203	chr5:111731026-111758203	0	-	111731026	111755772	789624	5	20,78,61,44,272,	0,4403,24743,26109,26905,
#Partially deleted in new
chr5	111734487	111757194	chr5:111734487-111757194	0	-	111734487	111734487	8553170	2	1020,59,	0,22648,
#Partially deleted in new
chr5	111734983	111757633	chr5:111734983-111757633	0	-	111734983	111734983	8553170	4	524,61,44,72,	0,20786,22152,22578,
#Partially deleted in new
chr5	111735495	111758042	chr5:111735495-111758042	0	-	111735495	111755772	8553170	4	12,157,44,98,	0,20274,21640,22449,
#Deleted in new
chr5	111755356	111757164	chr5:111755356-111757164	0	-	111755356	111755356	8553170	2	474,29,	0,1779,
#Deleted in new
chr5	111846049	111846566	chr5:111846049-111846566	7	-	111846049	111846049	16724991	1	517,	0,
#Partially deleted in new
chr5	111912507	112017306	chr5:111912507-112017306	3	+	111912507	111912507	789624	4	213,98,132,167,	0,27529,61867,104632,
#Partially deleted in new
chr5	111940052	111948988	chr5:111940052-111948988	0	+	111940052	111940052	8553170	2	82,129,	0,8807,
#Partially deleted in new
chr5	111969451	112017309	chr5:111969451-112017309	1	+	111969451	111969451	8553170	3	109,132,170,	0,4923,47688,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr5	112142440	112228778	chr5:112142440-112228778	0	-	112142440	112142440	8553170	14	1440,118,42,82,111,69,48,120,78,48,114,84,91,107,	0,3440,15960,26298,26554,27860,28504,41575,52127,53220,61934,62980,67451,86231,
#Deleted in new
chr5	112160525	112164276	chr5:112160525-112164276	3	+	112160525	112160525	789624	3	770,73,2126,	0,1177,1625,
#Deleted in new
chr5	112160528	112162302	chr5:112160528-112162302	0	+	112160528	112160528	8553170	2	767,600,	0,1174,
#Deleted in new
chr5	112160891	112162324	chr5:112160891-112162324	0	+	112160891	112160891	8553170	2	404,174,	0,1259,
#Deleted in new
chr5	112160933	112162311	chr5:112160933-112162311	0	+	112160933	112160933	8553170	3	58,73,161,	0,769,1217,
#Deleted in new
chr5	112161484	112161617	chr5:112161484-112161617	3	+	112161484	112161484	789624	1	133,	0,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr5	112162617	112419313	chr5:112162617-112419313	1	-	112164989	112419039	789624	23	2501,82,111,69,48,120,78,48,114,84,91,122,78,92,64,89,88,121,98,79,52,105,373,	0,6121,6377,7683,8327,21398,31950,33043,41757,42803,47274,72016,77042,78101,96611,97273,99876,102278,103615,112708,117654,144768,256323,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr5	112162620	112419316	chr5:112162620-112419316	3	-	112164989	112419039	789624	23	2498,82,111,69,48,120,78,48,114,84,91,122,78,92,64,89,88,121,98,79,52,105,376,	0,6118,6374,7680,8324,21395,31947,33040,41754,42800,47271,72013,77039,78098,96608,97270,99873,102275,103612,112705,117651,144765,256320,
#Partially deleted in new
chr5	112165000	112183387	chr5:112165000-112183387	0	-	112165000	112165000	8553170	6	118,82,111,114,48,25,	0,3738,3994,5255,5944,18362,
#Partially deleted in new
chr5	112170008	112205502	chr5:112170008-112205502	0	-	112170008	112170008	8553170	7	361,48,120,78,48,114,82,	0,936,14007,24559,25652,34366,35412,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	112173569	112175548	chr5:112173569-112175548	3	+	112173569	112173569	8553170	2	119,338,	0,1641,
#Partially deleted in new
chr5	112192019	112196996	chr5:112192019-112196996	1	+	112192019	112192019	8553170	3	201,61,326,	0,2579,4651,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	112192185	112207063	chr5:112192185-112207063	3	+	112192185	112192185	8553170	4	35,61,263,135,	0,2413,12202,14743,
#Partially deleted in new
chr5	112195660	112206062	chr5:112195660-112206062	0	-	112195660	112195660	8553170	4	48,114,84,87,	0,8714,9760,10315,
#Partially deleted in new
chr5	112204436	112210139	chr5:112204436-112210139	0	+	112204436	112204436	8553170	2	214,181,	0,5522,
#Partially deleted in new
chr5	112228282	112257309	chr5:112228282-112257309	3	+	112228282	112228282	789624	4	70,35,159,447,	0,21315,22332,28580,
#Partially deleted in new
chr5	112234633	112249190	chr5:112234633-112249190	0	-	112234633	112234633	8553170	4	122,78,92,64,	0,5026,6085,14493,
#Partially deleted in new
chr5	112239599	112264987	chr5:112239599-112264987	0	-	112239599	112239599	8553170	6	138,92,64,89,88,92,	0,1119,19629,20291,22894,25296,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	112263407	112419313	chr5:112263407-112419313	0	-	112263407	112263407	8553170	6	1609,98,79,52,105,373,	0,2825,11918,16864,43978,155533,
#Partially deleted in new
chr5	112275238	112307402	chr5:112275238-112307402	0	-	112275238	112275238	8553170	3	166,52,17,	0,5033,32147,
#Deleted in new
chr5	112363455	112363666	chr5:112363455-112363666	7	-	112363455	112363455	16724991	1	211,	0,
#Deleted in new
chr5	112419582	112420978	chr5:112419582-112420978	3	+	112419582	112419582	789624	1	1396,	0,
#Deleted in new
chr5	112419582	112420613	chr5:112419582-112420613	0	+	112419582	112419582	8553170	1	1031,	0,
#Deleted in new
chr5	112452702	112452989	chr5:112452702-112452989	7	-	112452702	112452702	16724991	1	287,	0,
#Deleted in new
chr5	112546972	112547505	chr5:112546972-112547505	7	+	112546972	112546972	16724991	1	533,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	112628435	112632100	chr5:112628435-112632100	3	+	112628435	112628435	8553170	4	175,126,217,97,	0,661,1955,3568,
#Partially deleted in new
chr5	112628599	112630702	chr5:112628599-112630702	0	+	112628599	112628599	8553170	3	11,126,312,	0,497,1791,
#Partially deleted in new
chr5	112628856	112630565	chr5:112628856-112630565	1	+	112628856	112628856	8553170	2	366,175,	0,1534,
#Partially deleted in new
chr5	112707497	112767322	chr5:112707497-112767322	0	+	112754890	112767322	789624	4	152,153,85,134,	0,47375,58828,59691,
#Partially deleted in new
chr5	112707520	112766383	chr5:112707520-112766383	0	+	112707717	112754884	789624	3	362,153,58,	0,47352,58805,
#Partially deleted in new
chr5	112707521	112839054	chr5:112707521-112839054	0	+	112707717	112839054	789624	14	361,85,202,109,114,105,99,379,96,140,78,117,215,1502,	0,58804,59667,68107,73268,93757,107973,111444,114374,119586,120407,121334,127429,130031,
#Partially deleted in new
chr5	112737884	112842755	chr5:112737884-112842755	0	+	112754890	112810155	789624	17	41,153,85,202,109,114,84,105,186,99,379,96,140,78,117,215,5203,	0,16988,28441,29304,37744,42905,54561,63394,72241,77610,81081,84011,89223,90044,90971,97066,99668,
#Partially deleted in new
chr5	112737887	112846239	chr5:112737887-112846239	3	+	112754890	112844126	0	16	38,153,85,202,109,114,84,105,99,379,96,140,78,117,215,8687,	0,16985,28438,29301,37741,42902,54558,63391,77607,81078,84008,89220,90041,90968,97063,99665,
#Partially deleted in new
chr5	112737894	112846056	chr5:112737894-112846056	1	+	112754890	112844126	0	17	31,108,153,85,202,109,114,84,105,99,379,96,140,78,117,215,8504,	0,458,16978,28431,29294,37734,42895,54551,63384,77600,81071,84001,89213,90034,90961,97056,99658,
#Partially deleted in new
chr5	112738331	112839508	chr5:112738331-112839508	0	+	112754890	112839508	789624	16	129,153,85,202,109,114,84,105,99,379,96,140,78,117,215,1956,	0,16541,27994,28857,37297,42458,54114,62947,77163,80634,83564,88776,89597,90524,96619,99221,
#Partially deleted in new
chr5	112777629	112778161	chr5:112777629-112778161	7	-	112777629	112777629	16724991	1	532,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	112778362	112778469	chr5:112778362-112778469	3	+	112778362	112778362	8553170	1	107,	0,
#Partially deleted in new
chr5	112821895	112839871	chr5:112821895-112839871	0	+	112821895	112835009	789624	3	96,215,2319,	0,13055,15657,
#Partially deleted in new
chr5	112821948	112837722	chr5:112821948-112837722	0	+	112821948	112837722	789624	7	43,54,140,78,117,215,170,	0,1358,5159,5980,6907,13002,15604,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	112827212	112829954	chr5:112827212-112829954	0	+	112827212	112827212	8553170	3	35,78,1099,	0,716,1643,
#Partially deleted in new
chr5	112827212	112867582	chr5:112827212-112867582	3	+	112827212	112862536	789624	8	35,78,117,25,76,72,112,179,	0,716,1643,29436,35295,37244,37408,40191,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	112861221	112869788	chr5:112861221-112869788	3	+	112861376	112867537	0	5	196,76,72,112,2385,	0,1286,3235,3399,6182,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	112861294	112898371	chr5:112861294-112898371	0	+	112861376	112864448	789624	4	123,76,95,6769,	0,1213,3139,30308,
#Partially deleted in new
chr5	112861304	112867935	chr5:112861304-112867935	1	+	112861376	112867403	0	5	113,76,72,112,564,	0,1203,3152,3316,6067,
#Partially deleted in new
chr5	112861304	112893079	chr5:112861304-112893079	1	+	112861376	112891607	789624	5	113,76,72,112,1477,	0,1203,3152,3316,30298,
#Partially deleted in new
chr5	112861309	112867771	chr5:112861309-112867771	1	+	112861376	112867415	0	4	108,72,112,368,	0,3147,3311,6094,
#Partially deleted in new
chr5	112861324	112868392	chr5:112861324-112868392	1	+	112861376	112867537	789624	4	93,76,112,989,	0,1183,3296,6079,
#Partially deleted in new
chr5	112861325	112864919	chr5:112861325-112864919	0	+	112861325	112861325	8553170	3	92,76,463,	0,1182,3131,
#Partially deleted in new
chr5	112861331	112865219	chr5:112861331-112865219	1	+	112861376	112864746	789624	4	86,76,72,599,	0,1176,3125,3289,
#Partially deleted in new
chr5	112862361	112867724	chr5:112862361-112867724	0	+	112862361	112862361	8553170	4	222,72,112,321,	0,2095,2259,5042,
#Partially deleted in new
chr5	112862416	112891725	chr5:112862416-112891725	0	+	112862416	112862416	8553170	4	167,72,112,123,	0,2040,2204,29186,
#Partially deleted in new
chr5	112864608	112867752	chr5:112864608-112867752	0	+	112864608	112864608	8553170	2	124,349,	0,2795,
#Partially deleted in new
chr5	112876378	112922539	chr5:112876378-112922539	3	-	112878785	112922190	789624	5	2457,169,139,94,467,	0,10636,26001,44784,45694,
#Partially deleted in new
chr5	112878084	112921514	chr5:112878084-112921514	0	-	112878084	112878084	8553170	5	751,169,368,139,352,	0,8930,14365,24295,43078,
#Partially deleted in new
chr5	112878084	112922227	chr5:112878084-112922227	1	-	112878817	112922190	789624	4	751,139,94,155,	0,24295,43078,43988,
#Partially deleted in new
chr5	112878576	112922230	chr5:112878576-112922230	0	-	112892772	112922230	789624	6	259,169,368,139,94,158,	0,8438,13873,23803,42586,43496,
#Partially deleted in new
chr5	112878832	112921997	chr5:112878832-112921997	0	-	112878832	112921810	789624	5	3,169,139,94,278,	0,8182,23547,42330,42887,
#Deleted in new
chr5	112885093	112885745	chr5:112885093-112885745	7	+	112885093	112885093	16724991	1	652,	0,
#Partially deleted in new
chr5	112887014	112921504	chr5:112887014-112921504	0	-	112887014	112887014	8553170	3	169,139,342,	0,15365,34148,
#Partially deleted in new
chr5	112887014	112922289	chr5:112887014-112922289	1	-	112887095	112922190	789624	3	169,94,217,	0,34148,35058,
#Deleted in new
chr5	112891609	112893079	chr5:112891609-112893079	7	+	112891609	112891609	16724991	1	1470,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	112976701	113020123	chr5:112976701-113020123	1	+	112976933	113013484	789624	10	285,152,128,99,153,113,108,136,52,6803,	0,9133,15419,15970,24382,24655,24865,27240,34054,36619,
#Partially deleted in new
chr5	112976709	113013849	chr5:112976709-113013849	0	+	112976709	113013484	789624	9	277,99,153,113,108,136,105,52,529,	0,15962,24374,24647,24857,27232,31228,34046,36611,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	112976735	113020970	chr5:112976735-113020970	3	+	112976933	113013484	789624	11	251,152,128,99,153,113,108,136,105,52,7650,	0,9099,15385,15936,24348,24621,24831,27206,31202,34020,36585,
#Partially deleted in new
chr5	112976793	112986010	chr5:112976793-112986010	0	+	112976793	112976793	8553170	2	193,176,	0,9041,
#Partially deleted in new
chr5	112976812	112984651	chr5:112976812-112984651	0	+	112976812	112976812	8553170	2	174,678,	0,7161,
#Partially deleted in new
chr5	112976941	113007989	chr5:112976941-113007989	0	+	112992750	113001408	789624	6	45,99,153,113,108,52,	0,15730,24142,24415,24625,30996,
#Partially deleted in new
chr5	112985831	113001215	chr5:112985831-113001215	0	+	112985831	112985831	8553170	4	155,128,99,132,	0,6289,6840,15252,
#Partially deleted in new
chr5	113001125	113008307	chr5:113001125-113008307	0	+	113001125	113001125	8553170	5	111,113,108,136,370,	0,231,441,2816,6812,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr5	113022098	113294949	chr5:113022098-113294949	1	-	113027301	113294385	789624	17	5384,123,101,207,235,184,104,141,149,90,147,207,164,143,143,114,621,	0,6835,21431,26994,31626,41885,45981,48995,60761,62002,63065,79640,82093,100585,121119,129210,272230,
#Partially deleted in new
chr5	113026131	113234677	chr5:113026131-113234677	1	-	113027301	113143342	789624	17	1351,123,101,207,235,184,104,141,149,90,147,207,164,143,143,114,241,	0,2802,17398,22961,27593,37852,41948,44962,56728,57969,59032,75607,78060,96552,117086,125177,208305,
#Partially deleted in new
chr5	113027301	113488830	chr5:113027301-113488830	3	-	113027301	113488414	789624	19	181,123,101,207,235,184,104,141,149,90,147,207,164,143,143,114,212,245,586,	0,1632,16228,21791,26423,36682,40778,43792,55558,56799,57862,74437,76890,95382,115916,124007,313217,357666,460943,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	113048562	113064040	chr5:113048562-113064040	0	-	113048718	113064040	789624	4	165,207,235,57,	0,530,5162,15421,
#Partially deleted in new
chr5	113048875	113294938	chr5:113048875-113294938	1	-	113049029	113294385	789624	14	424,235,184,104,141,149,90,147,207,164,143,143,114,610,	0,4849,15108,19204,22218,33984,35225,36288,52863,55316,73808,94342,102433,245453,
#Partially deleted in new
chr5	113101499	113122830	chr5:113101499-113122830	0	-	113101499	113101499	8553170	3	446,164,147,	0,2692,21184,
#Partially deleted in new
chr5	113101542	113104625	chr5:113101542-113104625	0	-	113101542	113101542	8553170	2	403,434,	0,2649,
#Partially deleted in new
chr5	113101733	113203317	chr5:113101733-113203317	0	-	113101733	113101733	8553170	6	212,164,143,143,114,81,	0,2458,20950,41484,49575,101503,
#Partially deleted in new
chr5	113101733	113204576	chr5:113101733-113204576	0	-	113101733	113101733	8553170	6	212,164,143,143,114,64,	0,2458,20950,41484,49575,102779,
#Deleted in new
chr5	113432553	113435031	chr5:113432553-113435031	3	-	113433735	113434839	789624	1	2478,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	113435078	113437174	chr5:113435078-113437174	0	+	113435078	113435078	8553170	2	89,1609,	0,487,
#Partially deleted in new
chr5	113448122	113488823	chr5:113448122-113488823	0	-	113448122	113448122	8553170	2	165,579,	0,40122,
#Deleted in new
chr5	113493834	113493960	chr5:113493834-113493960	3	+	113493834	113493834	8553170	1	126,	0,
#Partially deleted in new
chr5	113513682	113595284	chr5:113513682-113595284	3	+	113513895	113593383	0	30	400,91,197,200,167,103,157,108,149,136,127,66,179,97,88,81,83,106,120,273,127,206,196,110,293,178,204,183,88,1803,	0,1589,11298,12903,19196,20622,21959,25391,27285,28685,34858,35272,39498,39907,40084,40259,42369,47397,49690,50176,52210,53409,53971,65903,67734,70619,77358,78313,79620,79799,
#Partially deleted in new
chr5	113513693	113561196	chr5:113513693-113561196	0	+	113513895	113532897	789624	16	389,91,167,103,157,108,149,136,127,66,179,97,88,81,83,117,	0,1578,19185,20611,21948,25380,27274,28674,34847,35261,39487,39896,40073,40248,42358,47386,
#Partially deleted in new
chr5	113513708	113556360	chr5:113513708-113556360	1	+	113513895	113556138	789624	17	374,91,197,200,167,103,157,108,149,136,127,66,179,97,88,81,309,	0,1563,11272,12877,19170,20596,21933,25365,27259,28659,34832,35246,39472,39881,40058,40233,42343,
#Partially deleted in new
chr5	113514145	113526703	chr5:113514145-113526703	0	+	113514268	113526703	789624	4	130,91,197,118,	0,1126,10835,12440,
#Partially deleted in new
chr5	113565718	113579666	chr5:113565718-113579666	0	+	113565718	113565718	8553170	4	301,206,196,81,	0,1373,1935,13867,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	113581265	113595285	chr5:113581265-113595285	0	+	113581265	113581265	8553170	3	3214,204,3290,	0,9775,10730,
#Deleted in new
chr5	113591157	113592601	chr5:113591157-113592601	0	+	113591157	113591157	8553170	2	87,606,	0,838,
#Partially deleted in new
chr5	114055544	114496500	chr5:114055544-114496500	1	+	114361128	114496182	0	11	956,72,206,1298,96,419,142,111,128,70,606,	0,1555,305400,306419,308361,348893,407504,417509,431505,437858,440350,
#Partially deleted in new
chr5	114055925	114229386	chr5:114055925-114229386	0	+	114055925	114055925	8553170	5	575,72,69,86,1442,	0,1174,49787,165554,172019,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	114253512	114253754	chr5:114253512-114253754	3	+	114253512	114253512	8553170	1	242,	0,
#Partially deleted in new
chr5	114362318	114496497	chr5:114362318-114496497	3	+	114362775	114496182	0	8	943,96,419,142,111,128,70,603,	0,1587,42119,100730,110735,124731,131084,133576,
#Partially deleted in new
chr5	114362318	114496495	chr5:114362318-114496495	1	+	114463091	114496182	0	7	943,96,142,111,128,70,601,	0,1587,100730,110735,124731,131084,133576,
#Partially deleted in new
chr5	114362737	114496493	chr5:114362737-114496493	0	+	114362737	114496182	789624	9	524,96,419,142,111,128,9,70,599,	0,1168,41700,100311,110316,124312,127953,130665,133157,
#Partially deleted in new
chr5	114363106	114495946	chr5:114363106-114495946	0	+	114363106	114363106	8553170	7	155,96,142,111,128,70,52,	0,799,99942,109947,123943,130296,132788,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	114433529	114496500	chr5:114433529-114496500	1	+	114463091	114496182	0	6	400,142,111,128,70,606,	0,29519,39524,53520,59873,62365,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	114433577	114493442	chr5:114433577-114493442	0	+	114463091	114486775	789624	6	352,142,111,106,128,40,	0,29471,39476,53120,53472,59825,
#Partially deleted in new
chr5	114486670	114496058	chr5:114486670-114496058	0	+	114486670	114486670	8553170	3	507,70,164,	0,6732,9224,
#Partially deleted in new
chr5	114486701	114496015	chr5:114486701-114496015	0	+	114486701	114486701	8553170	4	476,9,70,121,	0,3989,6701,9193,
#Partially deleted in new
chr5	114488996	114668410	chr5:114488996-114668410	3	-	114488996	114488996	8553170	5	35,77,139,124,68,	0,7105,178612,179111,179346,
#Partially deleted in new
chr5	114576040	114579970	chr5:114576040-114579970	3	+	114576040	114576040	789624	2	85,666,	0,3264,
#Partially deleted in new
chr5	114662960	114668406	chr5:114662960-114668406	1	-	114662960	114662960	8553170	4	265,139,124,64,	0,4648,5147,5382,
#Deleted in new
chr5	115031272	115031894	chr5:115031272-115031894	3	-	115031272	115031272	8553170	1	622,	0,
#Deleted in new
chr5	115087891	115088475	chr5:115087891-115088475	3	-	115087891	115087891	8553170	1	584,	0,
#Partially deleted in new
chr5	115124761	115180159	chr5:115124761-115180159	3	-	115126502	115180037	789624	10	2096,298,288,125,254,96,147,326,235,185,	0,5830,9098,12238,12601,16517,19836,22307,38756,55213,
#Partially deleted in new
chr5	115124762	115169961	chr5:115124762-115169961	1	-	115126502	115169634	789624	10	2095,298,288,125,254,96,147,326,235,354,	0,5829,9097,12237,12600,16516,19835,22306,38755,44845,
#Partially deleted in new
chr5	115126502	115180037	chr5:115126502-115180037	1	-	115126502	115147227	789624	9	355,298,288,125,254,96,147,326,63,	0,4089,7357,10497,10860,14776,18095,20566,53472,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	115141323	115153811	chr5:115141323-115153811	0	-	115141323	115141323	8553170	4	51,147,326,107,	0,3274,5745,12381,
#Partially deleted in new
chr5	115147067	115169730	chr5:115147067-115169730	0	-	115147067	115147067	8553170	4	327,235,120,123,	0,16450,21899,22540,
#Partially deleted in new
chr5	115147068	115169866	chr5:115147068-115169866	0	-	115147068	115147068	8553170	2	326,259,	0,22539,
#Partially deleted in new
chr5	115147175	115169909	chr5:115147175-115169909	0	-	115147175	115169634	789624	4	219,30,235,302,	0,12465,16342,22432,
#Deleted in new
chr5	115148763	115149644	chr5:115148763-115149644	3	-	115148763	115148763	8553170	1	881,	0,
#Partially deleted in new
chr5	115171101	115180546	chr5:115171101-115180546	1	-	115171102	115180037	789624	2	121,572,	0,8873,
#Partially deleted in new
chr5	115171105	115174281	chr5:115171105-115174281	0	-	115171105	115171105	8553170	2	117,193,	0,2983,
#Partially deleted in new
chr5	115177122	115180546	chr5:115177122-115180546	1	-	115177749	115180037	789624	2	750,572,	0,2852,
#Deleted in new
chr5	115188562	115188932	chr5:115188562-115188932	3	+	115188562	115188562	8553170	1	370,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	115204011	115262872	chr5:115204011-115262872	3	-	115212401	115262851	789624	9	8572,109,185,46,133,152,68,119,161,	0,12853,17812,26964,32378,33846,37527,49125,58700,
#Partially deleted in new
chr5	115212401	115262851	chr5:115212401-115262851	1	-	115212401	115262851	789624	7	182,109,133,152,68,119,140,	0,4463,23988,25456,29137,40735,50310,
#Partially deleted in new
chr5	115216864	115253176	chr5:115216864-115253176	0	-	115216864	115216864	8553170	6	109,46,133,152,68,44,	0,14111,19525,20993,24674,36268,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	115216864	115231784	chr5:115216864-115231784	0	-	115216864	115216864	8553170	4	109,185,46,213,	0,4959,14111,14707,
#Partially deleted in new
chr5	115252830	115262865	chr5:115252830-115262865	0	-	115252830	115252830	8553170	2	425,154,	0,9881,
#Deleted in new
chr5	115262504	115263448	chr5:115262504-115263448	3	+	115262504	115262504	8553170	1	944,	0,
#Deleted in new
chr5	115264668	115265464	chr5:115264668-115265464	7	-	115264668	115264668	16724991	1	796,	0,
#Partially deleted in new
chr5	115267187	115296831	chr5:115267187-115296831	1	-	115267875	115296543	789624	10	731,119,96,414,391,76,90,122,122,405,	0,1694,2515,4025,8028,8806,9777,12459,17599,29239,
#Partially deleted in new
chr5	115267354	115296065	chr5:115267354-115296065	3	-	115267875	115279758	789624	11	564,119,96,414,391,76,90,122,129,122,156,	0,1527,2348,3858,7861,8639,9610,12292,12997,17432,28555,
#Partially deleted in new
chr5	115267374	115296693	chr5:115267374-115296693	1	-	115267875	115279758	789624	9	544,119,414,391,76,90,122,122,267,	0,1507,3838,7841,8619,9590,12272,17412,29052,
#Partially deleted in new
chr5	115267638	115296268	chr5:115267638-115296268	1	-	115267875	115279758	789624	10	280,119,96,414,391,76,90,122,122,359,	0,1243,2064,3574,7577,8355,9326,12008,17148,28271,
#Deleted in new
chr5	115269598	115271610	chr5:115269598-115271610	0	-	115269598	115269598	8553170	2	200,398,	0,1614,
#Deleted in new
chr5	115275334	115277185	chr5:115275334-115277185	0	-	115275334	115275334	8553170	3	272,76,221,	0,659,1630,
#Partially deleted in new
chr5	115275338	115296623	chr5:115275338-115296623	0	-	115275338	115275338	8553170	5	268,76,90,122,197,	0,655,1626,4308,21088,
#Partially deleted in new
chr5	115289035	115289330	chr5:115289035-115289330	7	-	115289035	115289035	16724991	1	295,	0,
#Deleted in new
chr5	115389642	115392370	chr5:115389642-115392370	7	-	115389642	115389642	16724991	1	2728,	0,
#Deleted in new
chr5	115402379	115402962	chr5:115402379-115402962	7	+	115402379	115402379	16724991	1	583,	0,
#Deleted in new
chr5	115489633	115489931	chr5:115489633-115489931	7	+	115489633	115489633	16724991	1	298,	0,
#Deleted in new
chr5	115493556	115493821	chr5:115493556-115493821	7	+	115493556	115493556	16724991	1	265,	0,
#Deleted in new
chr5	115512076	115513694	chr5:115512076-115513694	7	+	115512076	115512076	16724991	1	1618,	0,
#Partially deleted in new
chr5	115520907	115544894	chr5:115520907-115544894	3	-	115524307	115543493	789624	3	4710,734,372,	0,22042,23615,
#Partially deleted in new
chr5	115578641	115626161	chr5:115578641-115626161	3	-	115580548	115625792	789624	4	2556,128,246,561,	0,37676,41793,46959,
#Partially deleted in new
chr5	115578649	115602479	chr5:115578649-115602479	3	-	115580548	115581256	0	2	2666,383,	0,23447,
#Partially deleted in new
chr5	115578650	115626014	chr5:115578650-115626014	1	-	115581314	115625792	789624	4	2665,128,246,414,	0,37667,41784,46950,
#Partially deleted in new
chr5	115580826	115616564	chr5:115580826-115616564	0	-	115580826	115580826	8553170	2	489,247,	0,35491,
#Partially deleted in new
chr5	115581729	115602189	chr5:115581729-115602189	0	-	115581729	115581729	8553170	2	195,93,	0,20367,
#Deleted in new
chr5	115602056	115603205	chr5:115602056-115603205	0	+	115602056	115602056	8553170	2	404,160,	0,989,
#Partially deleted in new
chr5	115602243	115620278	chr5:115602243-115620278	3	+	115602243	115602243	789624	3	217,111,211,	0,802,17824,
#Partially deleted in new
chr5	115603044	115620659	chr5:115603044-115620659	1	+	115603044	115603044	8553170	3	112,61,592,	0,16094,17023,
#Partially deleted in new
chr5	115613507	115626173	chr5:115613507-115626173	3	-	115616208	115625792	789624	3	2938,246,573,	0,6927,12093,
#Partially deleted in new
chr5	115616065	115626036	chr5:115616065-115626036	0	-	115616065	115616065	8553170	3	380,246,179,	0,4369,9792,
#Partially deleted in new
chr5	115620627	115632992	chr5:115620627-115632992	0	-	115620627	115625792	789624	3	53,382,137,	0,4973,12228,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	115691461	115692167	chr5:115691461-115692167	3	-	115691461	115691461	8553170	1	706,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	115738977	115756527	chr5:115738977-115756527	3	+	115738977	115738977	8553170	3	137,148,1137,	0,382,16413,
#Deleted in new
chr5	115770585	115770989	chr5:115770585-115770989	7	+	115770585	115770585	16724991	1	404,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	115774318	115774502	chr5:115774318-115774502	3	-	115774318	115774318	8553170	1	184,	0,
#Partially deleted in new
chr5	115804732	115816954	chr5:115804732-115816954	3	-	115805432	115816397	0	5	730,170,155,78,727,	0,1616,6428,8448,11495,
#Partially deleted in new
chr5	115805263	115816657	chr5:115805263-115816657	0	-	115805263	115805263	789624	6	199,170,76,155,78,74,	0,1085,4358,5897,7917,11320,
#Deleted in new
chr5	115813181	115814481	chr5:115813181-115814481	0	-	115813181	115813181	8553170	2	77,196,	0,1104,
#Deleted in new
chr5	115813188	115816657	chr5:115813188-115816657	0	-	115813188	115813188	8553170	3	70,57,430,	0,709,3039,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	115828199	115841858	chr5:115828199-115841858	3	-	115831803	115841552	0	4	3664,63,137,469,	0,4402,9428,13190,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	115830340	115834352	chr5:115830340-115834352	0	-	115830340	115830340	8553170	2	1523,1751,	0,2261,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	115830672	115841565	chr5:115830672-115841565	1	-	115832602	115841552	0	3	1191,63,176,	0,1929,10717,
#Deleted in new
chr5	115831274	115833666	chr5:115831274-115833666	0	-	115831274	115831274	8553170	3	589,63,155,	0,1327,2237,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	115831478	115835161	chr5:115831478-115835161	0	-	115831478	115831478	8553170	3	385,63,244,	0,1123,3439,
#Partially deleted in new
chr5	115831487	115838312	chr5:115831487-115838312	0	-	115831487	115831487	8553170	4	376,63,87,685,	0,1114,2024,6140,
#Partially deleted in new
chr5	115831511	115841823	chr5:115831511-115841823	0	-	115841381	115841552	789624	4	352,63,137,1006,	0,1090,6116,9306,
#Partially deleted in new
chr5	115831513	115837781	chr5:115831513-115837781	0	-	115831513	115831513	8553170	3	350,63,154,	0,1088,6114,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	115831545	115841837	chr5:115831545-115841837	0	-	115840547	115841552	789624	5	318,63,137,116,448,	0,1056,6082,8951,9844,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	115831581	115839494	chr5:115831581-115839494	0	-	115831581	115831581	8553170	4	282,63,137,1624,	0,1020,6046,6289,
#Partially deleted in new
chr5	115831583	115841565	chr5:115831583-115841565	0	-	115840911	115841565	789624	5	280,63,137,117,176,	0,1018,6044,9234,9806,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	115831719	115841544	chr5:115831719-115841544	0	-	115840911	115841544	789624	6	144,63,137,116,117,155,	0,882,5908,8777,9098,9670,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	115840551	115841559	chr5:115840551-115841559	0	-	115840551	115840551	8553170	2	383,170,	0,838,
#Partially deleted in new
chr5	115841480	115914081	chr5:115841480-115914081	3	+	115842037	115913490	789624	6	626,92,112,72,108,720,	0,25189,28536,53606,61404,71881,
#Partially deleted in new
chr5	115841591	115870131	chr5:115841591-115870131	0	+	115841591	115841591	8553170	3	185,92,115,	0,25078,28425,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	115841945	115904088	chr5:115841945-115904088	0	+	115841945	115841945	8553170	5	161,92,72,141,1204,	0,24724,53141,56703,60939,
#Partially deleted in new
chr5	115841957	115913457	chr5:115841957-115913457	0	+	115842037	115906856	789624	8	149,92,112,72,108,41,48,96,	0,24712,28059,53129,60927,64863,70131,71404,
#Partially deleted in new
chr5	115841996	115914011	chr5:115841996-115914011	0	+	115841996	115841996	8553170	7	110,36,92,112,72,108,650,	0,10982,24673,28020,53090,60888,71365,
#Partially deleted in new
chr5	115842037	115906856	chr5:115842037-115906856	1	+	115842037	115906856	789624	6	69,92,112,72,108,36,	0,24632,27979,53049,60847,64783,
#Partially deleted in new
chr5	115842486	115870131	chr5:115842486-115870131	0	+	115842486	115842486	8553170	3	90,92,115,	0,24183,27530,
#Partially deleted in new
chr5	115866660	115895162	chr5:115866660-115895162	0	+	115866660	115866660	8553170	3	101,112,76,	0,3356,28426,
#Partially deleted in new
chr5	115895086	115913900	chr5:115895086-115913900	0	+	115895086	115895086	8553170	2	72,539,	0,18275,
#Partially deleted in new
chr5	115962453	116026416	chr5:115962453-116026416	0	+	115962617	116012386	789624	20	859,143,140,127,155,114,141,66,66,173,77,140,56,95,108,168,138,41,76,439,	0,20833,22116,25359,29669,31287,37308,37979,38139,38613,40381,40787,43458,49920,51966,52798,53174,59258,59937,63524,
#Partially deleted in new
chr5	115962493	116027602	chr5:115962493-116027602	3	+	115962617	116026118	789624	20	819,143,140,127,155,114,141,66,66,173,77,140,56,154,95,108,168,138,76,1625,	0,20793,22076,25319,29629,31247,37268,37939,38099,38573,40341,40747,43418,48247,49880,51926,52758,53134,59897,63484,
#Partially deleted in new
chr5	115962493	116027601	chr5:115962493-116027601	1	+	115962617	116026118	789624	21	617,166,143,140,127,155,114,141,66,66,173,77,140,56,154,95,108,168,138,76,1624,	0,653,20793,22076,25319,29629,31247,37268,37939,38099,38573,40341,40747,43418,48247,49880,51926,52758,53134,59897,63484,
#Deleted in new
chr5	115974512	115976275	chr5:115974512-115976275	7	-	115974512	115974512	16724991	1	1763,	0,
#Partially deleted in new
chr5	115995376	116027619	chr5:115995376-116027619	0	+	115999836	116005797	789624	16	186,141,66,66,173,77,140,179,380,95,108,168,138,41,76,1642,	0,4385,5056,5216,5690,7458,7864,10412,15138,16997,19043,19875,20251,26335,27014,30601,
#Partially deleted in new
chr5	115995376	116026420	chr5:115995376-116026420	0	+	115999836	116010551	789624	16	186,141,66,66,173,77,140,56,380,95,108,168,138,41,76,443,	0,4385,5056,5216,5690,7458,7864,10535,15138,16997,19043,19875,20251,26335,27014,30601,
#Partially deleted in new
chr5	115995396	116026410	chr5:115995396-116026410	0	+	115999836	116005797	789624	15	166,141,66,66,173,77,140,179,95,108,168,138,41,76,433,	0,4365,5036,5196,5670,7438,7844,10392,16977,19023,19855,20231,26315,26994,30581,
#Partially deleted in new
chr5	116014417	116020115	chr5:116014417-116020115	0	+	116014417	116014417	8553170	4	110,168,138,209,	0,834,1210,5489,
#Partially deleted in new
chr5	116014419	116023649	chr5:116014419-116023649	0	+	116014419	116014419	8553170	5	108,168,138,76,316,	0,832,1208,7971,8914,
#Deleted in new
chr5	116021026	116027603	chr5:116021026-116027603	0	+	116021026	116021026	8553170	3	726,76,1626,	0,1364,4951,
#Deleted in new
chr5	116022180	116026230	chr5:116022180-116026230	0	+	116022180	116022180	8553170	2	286,253,	0,3797,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	116032323	116060118	chr5:116032323-116060118	3	+	116051465	116058947	789624	5	182,93,105,140,1394,	0,18808,19133,21690,26401,
#Partially deleted in new
chr5	116051465	116059130	chr5:116051465-116059130	1	+	116051465	116058947	789624	3	96,140,406,	0,2548,7259,
#Deleted in new
chr5	116051916	116052289	chr5:116051916-116052289	7	-	116051916	116051916	16724991	1	373,	0,
#Deleted in new
chr5	116078109	116078570	chr5:116078109-116078570	3	-	116078109	116078109	8553170	1	461,	0,
#Deleted in new
chr5	116083806	116085416	chr5:116083806-116085416	3	-	116083806	116083806	8553170	1	1610,	0,
#Partially deleted in new
chr5	116084990	116293287	chr5:116084990-116293287	3	+	116085052	116292489	789624	7	103,91,111,156,111,60,837,	0,2506,6088,7554,49077,206526,207460,
#Partially deleted in new
chr5	116085015	116292718	chr5:116085015-116292718	0	+	116085052	116134093	789624	7	78,91,111,151,111,60,268,	0,2481,6063,7529,49052,206501,207435,
#Partially deleted in new
chr5	116085025	116293286	chr5:116085025-116293286	1	+	116087497	116292489	789624	7	68,91,111,156,111,60,836,	0,2471,6053,7519,49042,206491,207425,
#Partially deleted in new
chr5	116085473	116292657	chr5:116085473-116292657	1	+	116087497	116292489	789624	7	133,91,111,156,111,60,207,	0,2023,5605,7071,48594,206043,206977,
#Partially deleted in new
chr5	116091078	116292916	chr5:116091078-116292916	0	+	116091078	116292489	789624	4	111,156,60,466,	0,1466,200438,201372,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	116188454	116188552	chr5:116188454-116188552	3	-	116188454	116188454	8553170	1	98,	0,
#Deleted in new
chr5	116218025	116218295	chr5:116218025-116218295	7	-	116218025	116218025	16724991	1	270,	0,
#Partially deleted in new
chr5	116291538	116306923	chr5:116291538-116306923	0	+	116291538	116291538	8553170	5	38,110,146,154,124,	0,912,6708,11991,15261,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	116292456	116412762	chr5:116292456-116412762	0	+	116292456	116292456	8553170	6	104,146,154,177,141,120,	0,5790,11073,89821,107025,120186,
#Deleted in new
chr5	116302353	116304134	chr5:116302353-116304134	3	-	116302353	116302353	8553170	2	50,156,	0,1625,
#Partially deleted in new
chr5	116443615	116574934	chr5:116443615-116574934	3	-	116446612	116504944	789624	19	4196,165,21,59,81,141,177,156,132,218,89,120,91,102,63,61,118,138,750,	0,23967,29457,31929,34230,34398,34926,36506,38828,43133,44492,45272,48124,51797,52635,53711,58594,61229,130569,
#Partially deleted in new
chr5	116445749	116574395	chr5:116445749-116574395	1	-	116446612	116504944	789624	20	2062,165,51,21,59,81,141,177,156,132,218,89,120,91,102,63,61,118,138,211,	0,21833,27135,27323,29795,32096,32264,32792,34372,36694,40999,42358,43138,45990,49663,50501,51577,56460,59095,128435,
#Partially deleted in new
chr5	116446133	116469544	chr5:116446133-116469544	1	-	116446612	116467757	789624	2	1678,1962,	0,21449,
#Partially deleted in new
chr5	116446133	116478677	chr5:116446133-116478677	0	-	116446612	116478677	789624	6	1678,21,59,81,141,136,	0,26939,29411,31712,31880,32408,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	116446463	116449646	chr5:116446463-116449646	1	-	116446612	116449347	789624	2	1348,330,	0,2853,
#Partially deleted in new
chr5	116446612	116536458	chr5:116446612-116536458	1	-	116446612	116504944	789624	19	1199,165,21,59,81,141,177,156,132,218,89,120,91,102,63,61,118,138,161,	0,20970,26460,28932,31233,31401,31929,33509,35831,40136,41495,42275,45127,48800,49638,50714,55597,58232,89685,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	116447546	116449861	chr5:116447546-116449861	1	+	116447546	116447546	8553170	2	245,234,	0,2081,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	116447602	116471673	chr5:116447602-116471673	1	+	116447602	116447602	789624	3	189,190,483,	0,2025,23588,
#Partially deleted in new
chr5	116447687	116480279	chr5:116447687-116480279	0	-	116447687	116447687	8553170	7	124,165,21,59,81,141,158,	0,19895,25385,27857,30158,30326,32434,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	116449623	116508276	chr5:116449623-116508276	3	+	116449623	116449623	8553170	3	194,95,232,	0,48837,58421,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	116449627	116496121	chr5:116449627-116496121	0	+	116449627	116449627	8553170	2	190,566,	0,45928,
#Partially deleted in new
chr5	116449729	116499154	chr5:116449729-116499154	1	+	116449729	116449729	8553170	2	88,694,	0,48731,
#Deleted in new
chr5	116471189	116472638	chr5:116471189-116472638	1	+	116471189	116471189	8553170	2	66,370,	0,1079,
#Deleted in new
chr5	116478265	116480240	chr5:116478265-116480240	0	-	116478265	116478265	8553170	2	453,119,	0,1856,
#Partially deleted in new
chr5	116482458	116487229	chr5:116482458-116487229	0	-	116482458	116482458	8553170	2	117,481,	0,4290,
#Partially deleted in new
chr5	116486640	116489009	chr5:116486640-116489009	0	-	116486640	116486640	8553170	3	326,89,122,	0,1467,2247,
#Partially deleted in new
chr5	116486748	116495445	chr5:116486748-116495445	0	-	116486748	116486748	8553170	6	218,89,120,91,159,33,	0,1359,2139,4991,5578,8664,
#Partially deleted in new
chr5	116488914	116502677	chr5:116488914-116502677	0	-	116488914	116488914	8553170	7	93,91,102,63,61,118,239,	0,2825,6498,7336,8412,13295,13524,
#Partially deleted in new
chr5	116491795	116536428	chr5:116491795-116536428	0	-	116491795	116504944	789624	7	35,102,63,61,118,138,46,	0,3617,4455,5531,10414,13049,44587,
#Partially deleted in new
chr5	116496250	116554896	chr5:116496250-116554896	0	-	116496250	116504944	789624	5	63,61,118,138,158,	0,1076,5959,8594,58488,
#Partially deleted in new
chr5	116550114	116574234	chr5:116550114-116574234	0	-	116550114	116550114	8553170	2	532,50,	0,24070,
#Deleted in new
chr5	116562561	116562930	chr5:116562561-116562930	7	+	116562561	116562561	16724991	1	369,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	116574481	116591398	chr5:116574481-116591398	3	+	116574481	116574481	8553170	2	58,424,	0,16493,
#Deleted in new
chr5	116716242	116716650	chr5:116716242-116716650	7	+	116716242	116716242	16724991	1	408,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	116742990	116762209	chr5:116742990-116762209	3	-	116742990	116742990	789624	4	398,107,121,81,	0,17692,17904,19138,
#Partially deleted in new
chr5	116820992	116830187	chr5:116820992-116830187	3	-	116820992	116820992	8553170	3	145,345,63,	0,4536,9132,
#Partially deleted in new
chr5	117019547	117019679	chr5:117019547-117019679	7	-	117019547	117019547	16724991	1	132,	0,
#Partially deleted in new
chr5	117031199	117038569	chr5:117031199-117038569	3	+	117031199	117031199	8553170	2	231,189,	0,7181,
#Deleted in new
chr5	117301103	117301442	chr5:117301103-117301442	7	-	117301103	117301103	16724991	1	339,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	117313084	117330149	chr5:117313084-117330149	3	+	117313084	117313084	8553170	2	158,3630,	0,13435,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	117415508	117546298	chr5:117415508-117546298	3	+	117415508	117415508	8553170	4	231,96,37,200,	0,22015,56393,130590,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	117455262	117479368	chr5:117455262-117479368	1	+	117455262	117455262	8553170	3	192,37,388,	0,16639,23718,
#Partially deleted in new
chr5	117719239	117722097	chr5:117719239-117722097	7	-	117719239	117719239	16724991	2	706,220,	0,2638,
#Deleted in new
chr5	117778825	117779532	chr5:117778825-117779532	7	-	117778825	117778825	16724991	1	707,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	117925007	118206971	chr5:117925007-118206971	3	+	117925007	117925007	8553170	4	124,130,131,252,	0,70600,262457,281712,
#Partially deleted in new
chr5	118187466	118266035	chr5:118187466-118266035	1	+	118187466	118187466	8553170	2	125,682,	0,77887,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	118282574	118284782	chr5:118282574-118284782	3	+	118282574	118282574	789624	2	153,1070,	0,1138,
#Partially deleted in new
chr5	118545857	118562056	chr5:118545857-118562056	0	-	118545857	118545857	8553170	4	292,197,93,136,	0,6495,9189,16063,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	118575574	118581324	chr5:118575574-118581324	3	+	118575574	118575574	8553170	5	112,155,141,117,56,	0,1465,4079,4957,5694,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	118596187	118628092	chr5:118596187-118628092	3	+	118596187	118596187	789624	5	34,139,68,59,243,	0,13551,15172,18105,31662,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	118758210	118758274	chr5:118758210-118758274	3	+	118758210	118758210	8553170	1	64,	0,
#Partially deleted in new
chr5	118760473	118785459	chr5:118760473-118785459	3	-	118760473	118760473	8553170	2	379,118,	0,24868,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	118837321	118988220	chr5:118837321-118988220	1	-	118840916	118988149	789624	6	3766,129,193,95,91,91,	0,10768,91215,101874,107237,150808,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	118839540	118988545	chr5:118839540-118988545	3	-	118840916	118988511	789624	6	1547,129,193,95,91,252,	0,8549,88996,99655,105018,148753,
#Partially deleted in new
chr5	118840278	118988539	chr5:118840278-118988539	0	-	118848208	118988511	789624	5	809,129,95,91,246,	0,7811,98917,104280,148015,
#Partially deleted in new
chr5	118840278	118988539	chr5:118840278-118988539	1	-	118840916	118988511	789624	4	809,129,91,246,	0,7811,104280,148015,
#Deleted in new
chr5	118973795	118974122	chr5:118973795-118974122	7	+	118973795	118973795	16724991	1	327,	0,
#Deleted in new
chr5	118974585	118974670	chr5:118974585-118974670	3	+	118974585	118974585	5263520	1	85,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	119006346	119037668	chr5:119006346-119037668	1	-	119006346	119006346	8553170	6	284,104,132,164,77,51,	0,411,727,13730,27923,31271,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	119007570	119007668	chr5:119007570-119007668	3	+	119007570	119007570	8553170	1	98,	0,
#Deleted in new
chr5	119010059	119010542	chr5:119010059-119010542	7	+	119010059	119010059	16724991	1	483,	0,
#Deleted in new
chr5	119011470	119012056	chr5:119011470-119012056	7	+	119011470	119011470	16724991	1	586,	0,
#Partially deleted in new
chr5	119011802	119070890	chr5:119011802-119070890	3	-	119011802	119011802	789624	3	276,164,85,	0,8274,59003,
#Partially deleted in new
chr5	119019914	119070861	chr5:119019914-119070861	0	-	119019914	119019914	8553170	2	326,56,	0,50891,
#Partially deleted in new
chr5	119037771	119104280	chr5:119037771-119104280	0	+	119037771	119037771	8553170	5	117,109,126,72,153,	0,7098,60207,64163,66356,
#Partially deleted in new
chr5	119071204	119133691	chr5:119071204-119133691	0	+	119071569	119133691	789624	13	53,102,126,72,79,133,67,179,190,169,213,254,198,	0,350,26774,30730,33975,38946,43270,44953,47610,49766,58006,61927,62289,
#Partially deleted in new
chr5	119071388	119249127	chr5:119071388-119249127	1	+	119071569	119247219	789624	44	268,126,72,79,133,67,179,190,169,213,254,685,122,90,103,120,222,1683,108,170,98,166,262,1091,192,77,128,249,179,143,86,202,118,63,87,122,142,61,128,93,92,53,218,2133,	0,26590,30546,33791,38762,43086,44769,47426,49582,57822,61743,62105,62879,72452,73147,75448,75860,77350,80540,93118,93794,95227,96214,98801,100389,103872,105968,106607,118319,122439,124982,126366,131930,135445,145512,149083,149551,153320,161951,165933,167600,169030,172970,175606,
#Partially deleted in new
chr5	119071489	119249127	chr5:119071489-119249127	3	+	119071569	119247219	789624	43	167,126,72,79,133,67,179,190,169,213,254,685,122,90,103,120,222,1683,108,170,98,166,262,1091,192,77,128,249,179,143,86,202,118,87,122,142,61,128,93,92,53,218,2133,	0,26489,30445,33690,38661,42985,44668,47325,49481,57721,61642,62004,62778,72351,73046,75347,75759,77249,80439,93017,93693,95126,96113,98700,100288,103771,105867,106506,118218,122338,124881,126265,131829,145411,148982,149450,153219,161850,165832,167499,168929,172869,175505,
#Partially deleted in new
chr5	119071528	119105259	chr5:119071528-119105259	0	+	119071528	119071528	8553170	5	128,124,126,72,80,	0,10045,26450,30406,33651,
#Partially deleted in new
chr5	119100600	119102210	chr5:119100600-119102210	0	+	119100600	119100600	8553170	2	71,276,	0,1334,
#Partially deleted in new
chr5	119105222	119129332	chr5:119105222-119129332	0	+	119105222	119105222	8553170	6	36,133,67,179,169,122,	0,4928,9252,10935,15748,23988,
#Partially deleted in new
chr5	119126781	119128444	chr5:119126781-119128444	7	-	119126781	119126781	16724991	2	566,705,	0,958,
#Partially deleted in new
chr5	119129208	119133485	chr5:119129208-119133485	0	+	119129208	119129208	8553170	2	215,354,	0,3923,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	119132650	119132882	chr5:119132650-119132882	7	-	119132650	119132650	16724991	1	232,	0,
#Partially deleted in new
chr5	119134225	119147582	chr5:119134225-119147582	0	+	119134225	119134225	8553170	5	164,90,103,120,334,	0,9615,10310,12611,13023,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	119138858	119138965	chr5:119138858-119138965	3	+	119138858	119138858	8553170	1	107,	0,
#Partially deleted in new
chr5	119167628	119170535	chr5:119167628-119170535	0	+	119167628	119167628	8553170	2	236,346,	0,2561,
#Deleted in new
chr5	119170715	119171907	chr5:119170715-119171907	0	+	119170715	119170715	8553170	2	565,130,	0,1062,
#Partially deleted in new
chr5	119197757	119206892	chr5:119197757-119206892	0	+	119197757	119197757	8553170	3	199,118,59,	0,5561,9076,
#Partially deleted in new
chr5	119197818	119237414	chr5:119197818-119237414	0	+	119197818	119197818	8553170	7	138,118,87,122,142,61,93,	0,5500,19082,22653,23121,26890,39503,
#Partially deleted in new
chr5	119206496	119249138	chr5:119206496-119249138	0	+	119206496	119206496	8553170	10	400,87,122,142,61,128,93,53,218,2144,	0,10404,13975,14443,18212,26843,30825,33922,37862,40498,
#Partially deleted in new
chr5	119236313	119249120	chr5:119236313-119249120	0	+	119236313	119236313	8553170	5	1101,92,53,218,2126,	0,2675,4105,8045,10681,
#Partially deleted in new
chr5	119268691	119393394	chr5:119268691-119393394	1	+	119268906	119393381	789624	2	216,579,	0,124124,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	119306342	119306631	chr5:119306342-119306631	3	-	119306342	119306342	8553170	1	289,	0,
#Partially deleted in new
chr5	119333174	119393743	chr5:119333174-119393743	1	+	119333564	119393381	789624	2	457,928,	0,59641,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	119354313	119399688	chr5:119354313-119399688	3	+	119356090	119393381	789624	2	1808,6873,	0,38502,
#Partially deleted in new
chr5	119354772	119394598	chr5:119354772-119394598	1	+	119356090	119393381	789624	3	620,99,1783,	0,1250,38043,
#Partially deleted in new
chr5	119355312	119393446	chr5:119355312-119393446	1	+	119355355	119393381	789624	2	80,631,	0,37503,
#Partially deleted in new
chr5	119356034	119394599	chr5:119356034-119394599	1	+	119356090	119391453	789624	3	87,119,1784,	0,35330,36781,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	119445715	119445833	chr5:119445715-119445833	7	+	119445715	119445715	16724991	1	118,	0,
#Partially deleted in new
chr5	119452442	119542335	chr5:119452442-119542335	3	+	119452575	119541994	0	24	191,54,108,60,22,47,85,188,92,25,129,104,237,52,72,104,66,70,107,87,87,139,128,431,	0,3872,21465,21958,23263,23381,24974,26391,36749,39657,41375,44100,46874,49598,54375,56698,62538,72773,73474,74690,77451,78823,83980,89462,
#Partially deleted in new
chr5	119452472	119477489	chr5:119452472-119477489	0	+	119452472	119452472	8553170	7	161,54,108,60,50,47,73,	0,3842,21435,21928,23205,23351,24944,
#Partially deleted in new
chr5	119452496	119542332	chr5:119452496-119542332	1	+	119452753	119541994	0	25	325,54,65,108,60,22,47,85,188,92,25,129,104,237,52,72,104,66,70,107,87,87,139,128,428,	0,3818,19139,21411,21904,23209,23327,24920,26337,36695,39603,41321,44046,46820,49544,54321,56644,62484,72719,73420,74636,77397,78769,83926,89408,
#Partially deleted in new
chr5	119452496	119542332	chr5:119452496-119542332	1	+	119452575	119541994	0	24	137,54,108,60,22,47,85,188,92,25,129,104,237,52,72,104,66,70,107,87,87,139,128,428,	0,3818,21411,21904,23209,23327,24920,26337,36695,39603,41321,44046,46820,49544,54321,56644,62484,72719,73420,74636,77397,78769,83926,89408,
#Partially deleted in new
chr5	119452496	119542252	chr5:119452496-119542252	1	+	119452575	119541994	0	23	137,108,60,22,47,85,188,92,25,129,104,237,52,72,104,66,70,107,87,87,139,128,348,	0,21411,21904,23209,23327,24920,26337,36695,39603,41321,44046,46820,49544,54321,56644,62484,72719,73420,74636,77397,78769,83926,89408,
#Partially deleted in new
chr5	119452496	119478906	chr5:119452496-119478906	0	+	119452575	119478906	789624	8	137,54,108,60,22,47,76,73,	0,3818,21411,21904,23209,23327,24920,26337,
#Partially deleted in new
chr5	119452506	119542264	chr5:119452506-119542264	1	+	119452753	119541994	0	25	315,54,65,108,60,22,47,85,188,92,25,129,104,237,52,72,104,66,70,107,87,87,139,128,360,	0,3808,19129,21401,21894,23199,23317,24910,26327,36685,39593,41311,44036,46810,49534,54311,56634,62474,72709,73410,74626,77387,78759,83916,89398,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr5	119452508	119585006	chr5:119452508-119585006	1	+	119452575	119584429	789624	24	125,54,108,60,22,47,85,188,92,25,129,104,237,52,72,104,66,70,107,87,87,139,128,592,	0,3806,21399,21892,23197,23315,24908,26325,36683,39591,41309,44034,46808,49532,54309,56632,62472,72707,73408,74624,77385,78757,83914,131906,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr5	119452515	119637199	chr5:119452515-119637199	0	+	119452515	119452515	8553170	25	118,54,108,60,22,47,85,188,92,1847,104,237,52,72,104,66,70,107,87,87,139,128,107,59,1500,	0,3799,21392,21885,23190,23308,24901,26318,36676,39584,44027,46801,49525,54302,56625,62465,72700,73401,74617,77378,78750,83907,173448,182512,183184,
#Partially deleted in new
chr5	119452537	119542269	chr5:119452537-119542269	0	+	119452575	119473910	789624	25	96,54,65,108,60,22,47,85,188,92,25,129,104,237,52,72,104,66,70,107,87,87,139,128,365,	0,3777,19098,21370,21863,23168,23286,24879,26296,36654,39562,41280,44005,46779,49503,54280,56603,62443,72678,73379,74595,77356,78728,83885,89367,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr5	119452544	119542284	chr5:119452544-119542284	0	+	119452575	119477882	789624	24	89,54,108,60,22,47,85,97,188,92,1847,104,237,52,72,104,66,70,107,87,87,139,128,380,	0,3770,21363,21856,23161,23279,24872,25253,26289,36647,39555,43998,46772,49496,54273,56596,62436,72671,73372,74588,77349,78721,83878,89360,
#Partially deleted in new
chr5	119452564	119473980	chr5:119452564-119473980	0	+	119452564	119452564	8553170	3	69,54,73,	0,3750,21343,
#Partially deleted in new
chr5	119452715	119478935	chr5:119452715-119478935	0	+	119452715	119452715	8553170	8	106,54,108,60,22,47,85,102,	0,3599,21192,21685,22990,23108,24701,26118,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr5	119452735	119542317	chr5:119452735-119542317	0	+	119452753	119473914	789624	25	86,54,108,60,22,47,85,97,188,92,25,129,104,237,52,72,104,66,70,107,87,87,139,128,413,	0,3579,21172,21665,22970,23088,24681,25062,26098,36456,39364,41082,43807,46581,49305,54082,56405,62245,72480,73181,74397,77158,78530,83687,89169,
#Partially deleted in new
chr5	119452743	119542327	chr5:119452743-119542327	0	+	119452753	119473914	789624	25	78,54,108,60,22,47,50,85,188,92,25,129,104,237,52,72,104,66,70,107,87,87,139,128,423,	0,3571,21164,21657,22962,23080,23706,24673,26090,36448,39356,41074,43799,46573,49297,54074,56397,62237,72472,73173,74389,77150,78522,83679,89161,
#Partially deleted in new
chr5	119452752	119542332	chr5:119452752-119542332	0	+	119452753	119473914	789624	24	69,54,108,60,22,47,76,188,92,25,129,104,237,52,72,104,66,70,107,87,87,139,128,428,	0,3562,21155,21648,22953,23071,24664,26081,36439,39347,41065,43790,46564,49288,54065,56388,62228,72463,73164,74380,77141,78513,83670,89152,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	119452765	119456732	chr5:119452765-119456732	0	+	119452765	119452765	8553170	2	56,418,	0,3549,
#Partially deleted in new
chr5	119452774	119478999	chr5:119452774-119478999	0	+	119452774	119452774	8553170	8	47,54,108,60,22,47,85,166,	0,3540,21133,21626,22931,23049,24642,26059,
#Partially deleted in new
chr5	119456312	119475873	chr5:119456312-119475873	0	+	119456312	119456312	8553170	5	56,108,60,50,50,	0,17595,18088,19365,19511,
#Partially deleted in new
chr5	119471660	119541994	chr5:119471660-119541994	1	+	119471660	119541994	789624	23	40,108,60,22,47,85,188,92,25,129,104,237,52,72,104,66,70,107,87,87,139,128,90,	0,2247,2740,4045,4163,5756,7173,17531,20439,22157,24882,27656,30380,35157,37480,43320,53555,54256,55472,58233,59605,64762,70244,
#Partially deleted in new
chr5	119476447	119489283	chr5:119476447-119489283	0	+	119476447	119476447	8553170	4	52,85,188,92,	0,969,2386,12744,
#Partially deleted in new
chr5	119476529	119542001	chr5:119476529-119542001	1	+	119478840	119541994	789624	20	195,85,48,188,92,25,129,104,237,52,72,104,66,70,107,87,87,139,128,97,	0,887,1564,2304,12662,15570,17288,20013,22787,25511,30288,32611,38451,48686,49387,50603,53364,54736,59893,65375,
#Partially deleted in new
chr5	119476541	119542174	chr5:119476541-119542174	1	+	119477478	119541994	789624	19	183,85,188,92,25,129,104,237,52,72,104,66,70,107,87,87,139,128,270,	0,875,2292,12650,15558,17276,20001,22775,25499,30276,32599,38439,48674,49375,50591,53352,54724,59881,65363,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	119476570	119478943	chr5:119476570-119478943	0	+	119476570	119476570	8553170	4	154,85,97,110,	0,846,1227,2263,
#Partially deleted in new
chr5	119476574	119542289	chr5:119476574-119542289	0	+	119477478	119487375	789624	20	150,85,188,132,92,25,129,104,237,52,72,104,66,70,107,87,87,139,128,385,	0,842,2259,10694,12617,15525,17243,19968,22742,25466,30243,32566,38406,48641,49342,50558,53319,54691,59848,65330,
#Partially deleted in new
chr5	119477478	119541994	chr5:119477478-119541994	1	+	119477478	119541994	789624	18	14,188,92,25,129,104,237,52,72,104,66,70,107,87,87,139,128,90,	0,1355,11713,14621,16339,19064,21838,24562,29339,31662,37502,47737,48438,49654,52415,53787,58944,64426,
#Partially deleted in new
chr5	119478831	119492124	chr5:119478831-119492124	0	+	119478831	119478831	8553170	3	190,92,25,	0,10360,13268,
#Partially deleted in new
chr5	119493817	119502080	chr5:119493817-119502080	0	+	119493817	119493817	8553170	4	129,104,237,40,	0,2725,5499,8223,
#Partially deleted in new
chr5	119496540	119526024	chr5:119496540-119526024	0	+	119496540	119496540	8553170	8	106,237,52,72,104,66,70,108,	0,2776,5500,10277,12600,18440,28675,29376,
#Partially deleted in new
chr5	119496555	119499638	chr5:119496555-119499638	0	+	119496555	119496555	8553170	2	91,322,	0,2761,
#Partially deleted in new
chr5	119502048	119526009	chr5:119502048-119526009	0	+	119502048	119502048	8553170	6	44,72,104,66,70,93,	0,4769,7092,12932,23167,23868,
#Partially deleted in new
chr5	119509140	119542016	chr5:119509140-119542016	0	+	119509140	119509140	8553170	9	104,66,70,107,87,87,139,128,112,	0,5840,16075,16776,17992,20753,22125,27282,32764,
#Partially deleted in new
chr5	119525257	119542331	chr5:119525257-119542331	0	+	119525257	119525257	8553170	5	28,107,87,87,427,	0,659,1875,4636,16647,
#Partially deleted in new
chr5	119525735	119530100	chr5:119525735-119530100	0	+	119525735	119525735	8553170	3	288,87,207,	0,1397,4158,
#Partially deleted in new
chr5	119527157	119542332	chr5:119527157-119542332	0	+	119527157	119527157	8553170	5	62,87,139,128,428,	0,2736,4108,9265,14747,
#Partially deleted in new
chr5	119535769	119542252	chr5:119535769-119542252	0	+	119535769	119535769	8553170	2	781,348,	0,6135,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	119536437	119585013	chr5:119536437-119585013	0	+	119536437	119579926	789624	4	113,197,1244,599,	0,43450,44347,47977,
#Deleted in new
chr5	119547130	119547606	chr5:119547130-119547606	7	-	119547130	119547130	16724991	1	476,	0,
#Deleted in new
chr5	119555249	119555658	chr5:119555249-119555658	7	-	119555249	119555249	16724991	1	409,	0,
#Partially deleted in new
chr5	119629558	119635822	chr5:119629558-119635822	0	+	119629768	119635034	789624	4	280,775,56,123,	0,4401,5472,6141,
#Partially deleted in new
chr5	119629558	119635822	chr5:119629558-119635822	0	+	119629768	119635034	789624	4	280,775,59,123,	0,4401,5469,6141,
#Partially deleted in new
chr5	119629558	119635821	chr5:119629558-119635821	3	+	119629768	119635034	789624	5	280,141,775,56,122,	0,3189,4401,5472,6141,
#Partially deleted in new
chr5	119629558	119635821	chr5:119629558-119635821	1	+	119629768	119635034	789624	4	280,775,56,122,	0,4401,5472,6141,
#Partially deleted in new
chr5	119629596	119635082	chr5:119629596-119635082	1	+	119629768	119635034	789624	4	242,141,775,55,	0,3151,4363,5431,
#Partially deleted in new
chr5	119629597	119635822	chr5:119629597-119635822	0	+	119629768	119635034	789624	5	241,141,775,56,123,	0,3150,4362,5433,6102,
#Partially deleted in new
chr5	119629685	119635082	chr5:119629685-119635082	0	+	119629768	119635082	789624	4	153,141,293,55,	0,3062,4274,5342,
#Deleted in new
chr5	119652522	119653000	chr5:119652522-119653000	7	-	119652522	119652522	16724991	1	478,	0,
#Deleted in new
chr5	119680196	119681080	chr5:119680196-119681080	7	+	119680196	119680196	16724991	1	884,	0,
#Deleted in new
chr5	120337548	120337653	chr5:120337548-120337653	3	-	120337548	120337548	8553170	1	105,	0,
#Partially deleted in new
chr5	120345906	120404837	chr5:120345906-120404837	3	-	120345906	120345906	8553170	2	434,83,	0,58848,
#Partially deleted in new
chr5	120464277	120687332	chr5:120464277-120687332	3	+	120464486	120686709	789624	2	368,1379,	0,221676,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	120464323	120687332	chr5:120464323-120687332	1	+	120481203	120686709	789624	3	322,125,1379,	0,16845,221630,
#Partially deleted in new
chr5	120465630	120686431	chr5:120465630-120686431	0	+	120686004	120686431	789624	2	81,478,	0,220323,
#Partially deleted in new
chr5	120531463	120686930	chr5:120531463-120686930	1	+	120686004	120686709	789624	4	99,98,124,977,	0,85631,86978,154490,
#Partially deleted in new
chr5	120617136	120686925	chr5:120617136-120686925	1	+	120685953	120686709	789624	3	56,124,972,	0,1305,68817,
#Deleted in new
chr5	120658076	120658371	chr5:120658076-120658371	7	-	120658076	120658076	16724991	1	295,	0,
#Deleted in new
chr5	120710697	120710840	chr5:120710697-120710840	3	-	120710697	120710697	8553170	1	143,	0,
#Partially deleted in new
chr5	120781217	120790778	chr5:120781217-120790778	3	+	120781217	120781217	8553170	2	289,825,	0,8736,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	121040089	121044032	chr5:121040089-121044032	7	+	121040089	121040089	16724991	3	493,48,344,	0,600,3599,
#Deleted in new
chr5	121059243	121060953	chr5:121059243-121060953	7	+	121059243	121059243	16724991	2	102,564,	0,1146,
#Deleted in new
chr5	121195979	121196210	chr5:121195979-121196210	7	-	121195979	121195979	16724991	1	231,	0,
#Partially deleted in new
chr5	121199703	121325479	chr5:121199703-121325479	0	+	121199703	121199703	8553170	6	105,123,93,244,107,53,	0,5304,86077,114257,121176,125723,
#Partially deleted in new
chr5	121313976	121325480	chr5:121313976-121325480	0	+	121313976	121313976	8553170	4	228,107,30,59,	0,6903,10064,11445,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	121322553	121350450	chr5:121322553-121350450	2	+	121322553	121322553	8553170	3	54,174,465,	0,25139,27432,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	121322553	121357398	chr5:121322553-121357398	0	+	121322553	121322553	8553170	3	54,174,593,	0,25139,34252,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	121322586	121350272	chr5:121322586-121350272	0	+	121322586	121322586	8553170	5	21,30,44,174,287,	0,1454,3999,25106,27399,
#Deleted in new
chr5	121363001	121365314	chr5:121363001-121365314	3	+	121363001	121363001	8553170	1	2313,	0,
#Partially deleted in new
chr5	121575847	121576320	chr5:121575847-121576320	7	-	121575847	121575847	16724991	1	473,	0,
#Partially deleted in new
chr5	121616246	121616807	chr5:121616246-121616807	7	+	121616246	121616246	16724991	1	561,	0,
#Partially deleted in new
chr5	121671372	121671872	chr5:121671372-121671872	7	-	121671372	121671372	16724991	1	500,	0,
#Partially deleted in new
chr5	121851954	121852833	chr5:121851954-121852833	3	+	121851963	121852692	0	1	879,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	121961960	122028619	chr5:121961960-122028619	3	+	121962032	122027126	789624	8	108,89,73,72,82,715,38,1678,	0,12235,13354,32638,57299,58127,60409,64981,
#Partially deleted in new
chr5	122020529	122075570	chr5:122020529-122075570	0	+	122020529	122020529	8553170	3	273,38,256,	0,1840,54785,
#Deleted in new
chr5	122063194	122078285	chr5:122063194-122078285	3	-	122066742	122077985	789624	7	3555,116,96,157,138,109,931,	0,6858,7299,10818,12209,13698,14160,
#Deleted in new
chr5	122065796	122077174	chr5:122065796-122077174	0	-	122065796	122065796	8553170	6	953,116,96,157,138,83,	0,4256,4697,8216,9607,11295,
#Deleted in new
chr5	122065943	122076083	chr5:122065943-122076083	0	-	122065943	122065943	8553170	6	806,116,96,157,138,66,	0,4109,4550,8069,9460,10074,
#Deleted in new
chr5	122065944	122077223	chr5:122065944-122077223	0	-	122065944	122065944	8553170	6	805,116,96,157,138,331,	0,4108,4549,8068,9459,10948,
#Deleted in new
chr5	122069960	122078360	chr5:122069960-122078360	1	-	122069960	122077985	789624	7	4,116,96,157,138,109,1006,	0,92,533,4052,5443,6932,7394,
#Deleted in new
chr5	122070519	122077472	chr5:122070519-122077472	0	-	122075473	122077472	789624	5	70,78,157,138,118,	0,171,3493,4884,6835,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	122128761	122154856	chr5:122128761-122154856	3	-	122128761	122128761	8553170	2	498,233,	0,25862,
#Partially deleted in new
chr5	122129512	122153571	chr5:122129512-122153571	3	+	122151990	122153085	789624	2	171,1793,	0,22266,
#Partially deleted in new
chr5	122129559	122152179	chr5:122129559-122152179	0	+	122151990	122152179	789624	2	145,401,	0,22219,
#Partially deleted in new
chr5	122129565	122152099	chr5:122129565-122152099	0	+	122151990	122152099	789624	3	118,133,321,	0,18309,22213,
#Partially deleted in new
chr5	122129621	122179617	chr5:122129621-122179617	0	+	122179555	122179617	789624	5	62,93,88,90,68,	0,22157,26985,27496,49928,
#Deleted in new
chr5	122154495	122156015	chr5:122154495-122156015	3	-	122154495	122154495	8553170	2	345,83,	0,1437,
#Partially deleted in new
chr5	122160175	122183949	chr5:122160175-122183949	3	+	122179555	122182642	789624	3	87,181,1459,	0,19374,22315,
#Partially deleted in new
chr5	122160190	122180061	chr5:122160190-122180061	1	+	122179555	122179868	789624	3	72,181,201,	0,19359,19670,
#Deleted in new
chr5	122311296	122311673	chr5:122311296-122311673	3	-	122311296	122311296	8553170	1	377,	0,
#Partially deleted in new
chr5	122311353	122423142	chr5:122311353-122423142	0	+	122391134	122423142	789624	4	272,103,73,275,	0,79735,92439,111514,
#Partially deleted in new
chr5	122311690	122463954	chr5:122311690-122463954	0	+	122391134	122432039	789624	10	92,103,73,114,55,126,170,93,1069,464,	0,79398,92102,120278,128771,128938,132872,138154,138842,151800,
#Partially deleted in new
chr5	122311739	122423078	chr5:122311739-122423078	0	+	122391134	122423078	789624	5	58,103,141,73,211,	0,79349,89246,92053,111128,
#Partially deleted in new
chr5	122311759	122423032	chr5:122311759-122423032	0	+	122391134	122423032	789624	4	79,103,73,165,	0,79329,92033,111108,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	122311768	122451601	chr5:122311768-122451601	0	+	122391134	122451601	789624	10	70,117,103,73,872,114,126,170,93,1069,	0,25019,79320,92024,111099,120200,128860,132794,138076,138764,
#Partially deleted in new
chr5	122312068	122464219	chr5:122312068-122464219	3	+	122391134	122463496	0	11	216,103,73,872,180,114,126,170,93,1069,729,	0,79020,91724,110799,113283,119900,128560,132494,137776,138464,151422,
#Partially deleted in new
chr5	122312124	122464099	chr5:122312124-122464099	1	+	122391180	122463575	0	10	160,103,73,114,126,170,93,1069,71,609,	0,78964,91668,119844,128504,132438,137720,138408,140800,151366,
#Partially deleted in new
chr5	122312124	122464075	chr5:122312124-122464075	0	+	122391134	122432039	789624	10	160,103,73,114,126,170,93,1069,71,585,	0,78964,91668,119844,128504,132438,137720,138408,140800,151366,
#Partially deleted in new
chr5	122312124	122464099	chr5:122312124-122464099	1	+	122391134	122432039	789624	11	160,103,141,73,114,126,170,93,1069,71,609,	0,78964,88861,91668,119844,128504,132438,137720,138408,140800,151366,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	122312182	122403797	chr5:122312182-122403797	0	+	122391134	122403797	789624	5	102,117,103,141,5,	0,24605,78906,88803,91610,
#Partially deleted in new
chr5	122312206	122464082	chr5:122312206-122464082	1	+	122391134	122463575	0	14	78,1304,103,141,73,872,180,114,126,170,93,1069,71,592,	0,76360,78882,88779,91586,110661,113145,119762,128422,132356,137638,138326,140718,151284,
#Partially deleted in new
chr5	122312236	122463780	chr5:122312236-122463780	0	+	122391134	122440687	789624	8	48,103,73,126,170,93,1069,290,	0,78852,91556,128392,132326,137608,138296,151254,
#Partially deleted in new
chr5	122312236	122441277	chr5:122312236-122441277	0	+	122312236	122312236	8553170	7	48,103,73,872,180,114,649,	0,78852,91556,110631,113115,119732,128392,
#Partially deleted in new
chr5	122312248	122464116	chr5:122312248-122464116	0	+	122391134	122432039	789624	9	36,103,73,114,126,170,93,1069,626,	0,78840,91544,119720,128380,132314,137596,138284,151242,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	122312566	122391176	chr5:122312566-122391176	0	+	122391134	122391176	789624	3	354,117,88,	0,24221,78522,
#Deleted in new
chr5	122321290	122323358	chr5:122321290-122323358	3	-	122321290	122321290	8553170	2	544,39,	0,2029,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	122369761	122383568	chr5:122369761-122383568	3	-	122369761	122369761	8553170	4	254,138,72,99,	0,1595,1944,13708,
#Partially deleted in new
chr5	122391134	122463496	chr5:122391134-122463496	0	+	122391134	122425488	789624	9	57,73,180,114,126,170,93,1069,6,	0,12658,34217,40834,49494,53428,58710,59398,72356,
#Partially deleted in new
chr5	122391134	122463496	chr5:122391134-122463496	0	+	122391134	122444174	0	13	57,141,73,872,180,114,126,115,110,170,93,1069,6,	0,9851,12658,31733,34217,40834,49494,52436,52951,53428,58710,59398,72356,
#Partially deleted in new
chr5	122391134	122451604	chr5:122391134-122451604	1	+	122391134	122440687	789624	6	57,73,126,170,93,1072,	0,12658,49494,53428,58710,59398,
#Partially deleted in new
chr5	122391134	122451604	chr5:122391134-122451604	1	+	122391134	122425488	789624	8	57,73,180,114,126,170,93,1072,	0,12658,34217,40834,49494,53428,58710,59398,
#Partially deleted in new
chr5	122391134	122463496	chr5:122391134-122463496	0	+	122391134	122432039	789624	9	57,141,73,114,126,170,93,1069,6,	0,9851,12658,40834,49494,53428,58710,59398,72356,
#Partially deleted in new
chr5	122391134	122463496	chr5:122391134-122463496	0	+	122391134	122432039	789624	8	57,73,114,126,170,93,1069,6,	0,12658,40834,49494,53428,58710,59398,72356,
#Partially deleted in new
chr5	122436758	122469067	chr5:122436758-122469067	1	-	122436758	122436758	8553170	3	579,120,84,	0,13788,32225,
#Partially deleted in new
chr5	122436761	122469059	chr5:122436761-122469059	1	-	122436761	122436761	8553170	2	576,76,	0,32222,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	122437253	122479080	chr5:122437253-122479080	1	-	122437253	122437253	8553170	2	84,495,	0,41332,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	122444155	122464054	chr5:122444155-122464054	0	+	122444155	122444155	8553170	4	577,93,1069,564,	0,5689,6377,19335,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	122675794	122676755	chr5:122675794-122676755	7	+	122675794	122675794	16724991	1	961,	0,
#Partially deleted in new
chr5	122699389	122705069	chr5:122699389-122705069	0	-	122699389	122699389	8553170	3	471,141,62,	0,4818,5618,
#Deleted in new
chr5	122729408	122730685	chr5:122729408-122730685	0	-	122729408	122729408	8553170	2	271,197,	0,1080,
#Partially deleted in new
chr5	122774995	122830108	chr5:122774995-122830108	3	+	122775103	122829648	789624	15	216,118,164,67,44,142,79,76,114,94,206,144,81,72,511,	0,20270,24696,26873,27085,28476,33281,40900,41919,42284,43822,51054,52383,52579,54602,
#Partially deleted in new
chr5	122775078	122817018	chr5:122775078-122817018	0	+	122775103	122801873	789624	8	133,118,67,44,142,79,76,104,	0,20187,26790,27002,28393,33198,40817,41836,
#Partially deleted in new
chr5	122775081	122815973	chr5:122775081-122815973	0	+	122775103	122815973	789624	8	130,118,161,67,44,142,79,78,	0,20184,24613,26787,26999,28390,33195,40814,
#Deleted in new
chr5	122775081	122775676	chr5:122775081-122775676	0	+	122775081	122775081	8553170	2	130,70,	0,525,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	122775094	122803869	chr5:122775094-122803869	0	+	122775094	122775094	8553170	6	117,118,164,67,44,398,	0,20171,24597,26774,26986,28377,
#Partially deleted in new
chr5	122775202	122829755	chr5:122775202-122829755	1	+	122799816	122829648	789624	15	560,118,164,67,44,142,79,76,114,94,206,144,81,72,158,	0,20063,24489,26666,26878,28269,33074,40693,41712,42077,43615,50847,52176,52372,54395,
#Partially deleted in new
chr5	122795535	122829671	chr5:122795535-122829671	0	+	122795535	122795535	8553170	14	55,164,67,44,142,79,76,114,94,206,144,81,72,74,	0,4156,6333,6545,7936,12741,20360,21379,21744,23282,30514,31843,32039,34062,
#Partially deleted in new
chr5	122803493	122808711	chr5:122803493-122808711	0	+	122803493	122803493	8553170	2	120,435,	0,4783,
#Deleted in new
chr5	122815567	122817340	chr5:122815567-122817340	0	+	122815567	122815567	8553170	3	404,114,61,	0,1347,1712,
#Partially deleted in new
chr5	122816922	122829773	chr5:122816922-122829773	0	+	122816922	122816922	8553170	6	106,94,206,144,72,176,	0,357,1895,9127,10652,12675,
#Partially deleted in new
chr5	122817274	122827752	chr5:122817274-122827752	0	+	122817274	122817274	8553170	4	99,206,144,374,	0,1543,8775,10104,
#Partially deleted in new
chr5	122827320	122829755	chr5:122827320-122829755	0	+	122827320	122827320	8553170	2	326,158,	0,2277,
#Deleted in new
chr5	122827433	122828046	chr5:122827433-122828046	0	+	122827433	122827433	8553170	2	26,472,	0,141,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	122832355	122834533	chr5:122832355-122834533	3	+	122832355	122832355	8553170	1	2178,	0,
#Partially deleted in new
chr5	122843438	122998314	chr5:122843438-122998314	0	+	122843438	122843438	8553170	5	177,84,105,78,107,	0,93295,102616,139579,154769,
#Partially deleted in new
chr5	122844231	122999984	chr5:122844231-122999984	0	+	122844231	122844231	8553170	4	304,84,105,73,	0,92502,101823,155680,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	122845448	123009212	chr5:122845448-123009212	3	+	122845633	123007749	0	7	245,84,105,95,33,65,1531,	0,91285,100606,154463,155956,156491,162233,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	122845517	123008610	chr5:122845517-123008610	1	+	122845633	123002042	0	7	176,84,105,95,33,141,929,	0,91216,100537,154394,155887,156422,162164,
#Partially deleted in new
chr5	122845604	123008161	chr5:122845604-123008161	1	+	122845633	123007749	789624	8	89,99,84,105,95,33,65,480,	0,45422,91129,100450,154307,155800,156335,162077,
#Partially deleted in new
chr5	122845625	123002142	chr5:122845625-123002142	1	+	122845633	123002042	0	6	68,84,105,95,33,203,	0,91108,100429,154286,155779,156314,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	122845662	123007782	chr5:122845662-123007782	0	+	122845662	122853709	789624	8	31,94,84,105,95,33,65,101,	0,8011,91071,100392,154249,155742,156277,162019,
#Partially deleted in new
chr5	122936732	123029354	chr5:122936732-123029354	0	+	122936732	122936732	8553170	6	85,105,95,33,65,117,	0,9322,63179,64672,65207,92505,
#Partially deleted in new
chr5	122936733	123007774	chr5:122936733-123007774	0	+	122936733	122965460	789624	7	84,105,79,95,33,65,93,	0,9321,28709,63178,64671,65206,70948,
#Partially deleted in new
chr5	122946054	123029350	chr5:122946054-123029350	0	+	122946054	122946054	8553170	6	105,95,33,65,121,113,	0,53857,55350,55885,76252,83183,
#Partially deleted in new
chr5	122948595	123002145	chr5:122948595-123002145	0	+	122948595	122948595	8553170	4	51,95,33,206,	0,51316,52809,53344,
#Deleted in new
chr5	122998268	123002142	chr5:122998268-123002142	0	+	122998268	122998268	8553170	4	69,95,33,203,	0,1643,3136,3671,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	123022486	123022783	chr5:123022486-123022783	3	-	123022486	123022486	8553170	1	297,	0,
#Partially deleted in new
chr5	123023249	123036741	chr5:123023249-123036741	3	-	123023874	123036625	0	5	754,185,94,114,233,	0,2534,5525,6055,13259,
#Partially deleted in new
chr5	123028492	123036725	chr5:123028492-123036725	0	-	123028492	123028492	8553170	2	926,217,	0,8016,
#Partially deleted in new
chr5	123036270	123054667	chr5:123036270-123054667	3	+	123036270	123036270	8553170	2	356,205,	0,18192,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	123070781	123071080	chr5:123070781-123071080	3	+	123070781	123070781	8553170	1	299,	0,
#Deleted in new
chr5	123087247	123089295	chr5:123087247-123089295	3	-	123087247	123087247	8553170	2	692,100,	0,1948,
#Deleted in new
chr5	123087633	123090299	chr5:123087633-123090299	0	-	123087633	123087633	8553170	2	306,228,	0,2438,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	123089120	123194266	chr5:123089120-123194266	3	+	123090014	123187201	789624	8	399,607,308,128,125,343,177,7180,	0,879,10533,66763,70393,81645,91026,97966,
#Partially deleted in new
chr5	123099744	123180285	chr5:123099744-123180285	0	+	123099744	123170768	789624	3	217,343,139,	0,71021,80402,
#Partially deleted in new
chr5	123099745	123170935	chr5:123099745-123170935	0	+	123099745	123099745	8553170	3	216,128,170,	0,56138,71020,
#Partially deleted in new
chr5	123173400	123180319	chr5:123173400-123180319	0	+	123173400	123173400	8553170	2	83,173,	0,6746,
#Deleted in new
chr5	123236078	123236370	chr5:123236078-123236370	7	+	123236078	123236078	16724991	1	292,	0,
#Partially deleted in new
chr5	123344884	123423303	chr5:123344884-123423303	1	-	123346518	123422998	0	20	1869,146,99,123,162,93,90,153,97,183,150,175,217,228,198,149,142,115,157,354,	0,5059,19611,27765,32489,33451,37226,37852,38101,40066,41633,43547,45039,46225,48415,54251,67514,71125,73474,78065,
#Partially deleted in new
chr5	123344885	123423592	chr5:123344885-123423592	1	-	123346518	123418486	0	20	1868,146,99,123,162,93,90,153,97,183,150,175,217,228,198,149,142,115,157,84,	0,5058,19610,27764,32488,33450,37225,37851,38100,40065,41632,43546,45038,46224,48414,54250,67513,71124,73473,78623,
#Partially deleted in new
chr5	123344885	123423592	chr5:123344885-123423592	3	-	123346518	123422998	0	21	1868,146,99,123,162,93,90,153,97,183,150,175,217,228,198,149,142,115,157,81,84,	0,5058,19610,27764,32488,33450,37225,37851,38100,40065,41632,43546,45038,46224,48414,54250,67513,71124,73473,78064,78623,
#Partially deleted in new
chr5	123345002	123423544	chr5:123345002-123423544	0	-	123403251	123422998	789624	23	1751,146,99,123,162,93,90,153,97,183,150,175,217,228,198,149,128,47,142,115,157,81,36,	0,4941,19493,27647,32371,33333,37108,37734,37983,39948,41515,43429,44921,46107,48297,54133,58214,58691,67396,71007,73356,77947,78506,
#Partially deleted in new
chr5	123346399	123423344	chr5:123346399-123423344	0	-	123390260	123422998	0	21	354,146,194,99,123,162,93,90,153,97,183,150,303,442,228,198,149,142,115,157,395,	0,3544,11852,18096,26250,30974,31936,35711,36337,36586,38551,40118,41904,43524,44710,46900,52736,65999,69610,71959,76550,
#Partially deleted in new
chr5	123350059	123423592	chr5:123350059-123423592	0	-	123350059	123418486	789624	19	30,99,123,162,93,90,153,97,183,150,175,217,228,198,149,142,115,157,84,	0,14436,22590,27314,28276,32051,32677,32926,34891,36458,38372,39864,41050,43240,49076,62339,65950,68299,73449,
#Partially deleted in new
chr5	123390908	123393449	chr5:123390908-123393449	0	-	123390908	123390908	8553170	2	429,150,	0,2391,
#Partially deleted in new
chr5	123399251	123423558	chr5:123399251-123423558	0	-	123399251	123422998	789624	6	33,142,115,157,81,50,	0,13147,16758,19107,23698,24257,
#Deleted in new
chr5	123400921	123402344	chr5:123400921-123402344	7	-	123400921	123400921	16724991	1	1423,	0,
#Partially deleted in new
chr5	123418393	123423324	chr5:123418393-123423324	1	-	123418460	123422998	789624	3	122,109,375,	0,4073,4556,
#Deleted in new
chr5	123468780	123469429	chr5:123468780-123469429	7	-	123468780	123468780	16724991	1	649,	0,
#Deleted in new
chr5	123508735	123509187	chr5:123508735-123509187	3	-	123508735	123508735	8553170	1	452,	0,
#Partially deleted in new
chr5	123512098	123617040	chr5:123512098-123617040	1	+	123545663	123614396	0	13	472,425,41,70,149,235,86,85,146,96,107,24,2699,	0,33318,41008,45396,61294,63630,75969,76328,78314,79220,92625,93240,102243,
#Partially deleted in new
chr5	123512190	123545956	chr5:123512190-123545956	0	+	123512190	123512190	8553170	2	380,540,	0,33226,
#Partially deleted in new
chr5	123512259	123614455	chr5:123512259-123614455	1	+	123573442	123614396	0	10	311,149,235,86,85,149,96,107,24,114,	0,61133,63469,75808,76167,78150,79059,92464,93079,102082,
#Partially deleted in new
chr5	123512259	123614560	chr5:123512259-123614560	1	+	123557500	123614396	0	12	311,41,70,149,235,86,85,146,96,107,24,219,	0,40847,45235,61133,63469,75808,76167,78153,79059,92464,93079,102082,
#Partially deleted in new
chr5	123545414	123615455	chr5:123545414-123615455	1	+	123545663	123614396	0	12	427,41,70,149,235,86,85,146,96,107,24,1114,	0,7692,12080,27978,30314,42653,43012,44998,45904,59309,59924,68927,
#Partially deleted in new
chr5	123545416	123614853	chr5:123545416-123614853	1	+	123545663	123614396	0	12	425,41,70,149,235,86,85,149,96,107,24,512,	0,7690,12078,27976,30312,42651,43010,44993,45902,59307,59922,68925,
#Partially deleted in new
chr5	123545633	123617045	chr5:123545633-123617045	1	+	123545663	123614396	0	13	208,41,70,149,235,86,85,146,96,96,107,24,2704,	0,7473,11861,27759,30095,42434,42793,44779,45685,49405,59090,59705,68708,
#Partially deleted in new
chr5	123545633	123615446	chr5:123545633-123615446	3	+	123545663	123614396	0	12	208,41,70,149,235,86,85,146,96,96,107,1105,	0,7473,11861,27759,30095,42434,42793,44779,45685,49405,59090,68708,
#Deleted in new
chr5	123552964	123557564	chr5:123552964-123557564	0	+	123552964	123552964	8553170	2	183,70,	0,4530,
#Partially deleted in new
chr5	123588424	123615017	chr5:123588424-123615017	0	+	123588424	123614396	789624	5	87,149,96,107,676,	0,1985,2894,16299,25917,
#Partially deleted in new
chr5	123636109	123637403	chr5:123636109-123637403	7	+	123636109	123636109	16724991	1	1294,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	124059793	124395039	chr5:124059793-124395039	3	-	124059793	124059793	8553170	4	155,93,45,357,	0,2624,326435,334889,
#Deleted in new
chr5	124220578	124221077	chr5:124220578-124221077	7	-	124220578	124220578	16724991	1	499,	0,
#Duplicated in new
chr5	124306229	124405079	chr5:124306229-124405079	1	-	124306229	124306229	8553170	5	62,111,62,45,126,	0,7360,8087,79999,98724,
#Partially deleted in new
chr5	124395602	124400655	chr5:124395602-124400655	3	+	124395602	124395602	8553170	2	499,436,	0,4617,
#Deleted in new
chr5	124455372	124460098	chr5:124455372-124460098	3	+	124455372	124455372	8553170	3	86,135,387,	0,380,4339,
#Deleted in new
chr5	124459911	124460549	chr5:124459911-124460549	3	-	124459911	124459911	8553170	1	638,	0,
#Deleted in new
chr5	124469590	124469901	chr5:124469590-124469901	3	+	124469590	124469590	8553170	1	311,	0,
#Partially deleted in new
chr5	124492774	124536348	chr5:124492774-124536348	3	-	124492774	124492774	8553170	3	411,236,150,	0,19482,43424,
#Partially deleted in new
chr5	124636912	124644337	chr5:124636912-124644337	0	-	124636912	124636912	8553170	6	994,42,82,154,173,94,	0,1869,2220,4339,6598,7331,
#Partially deleted in new
chr5	124636915	124744521	chr5:124636915-124744521	1	-	124637899	124649102	789624	9	991,82,154,173,418,2455,88,256,109,	0,2217,4336,6595,7328,9763,12694,64098,107497,
#Partially deleted in new
chr5	124636916	124745425	chr5:124636916-124745425	3	-	124637899	124744989	789624	9	990,82,154,173,418,2455,88,256,1342,	0,2216,4335,6594,7327,9762,12693,64097,107167,
#Partially deleted in new
chr5	124636916	124745112	chr5:124636916-124745112	1	-	124644567	124744989	789624	8	990,82,154,173,418,88,256,1029,	0,2216,4335,6594,7327,12693,64097,107167,
#Partially deleted in new
chr5	124637277	124745081	chr5:124637277-124745081	0	-	124644567	124744989	789624	8	629,42,82,173,418,88,256,998,	0,1504,1855,6233,6966,12332,63736,106806,
#Partially deleted in new
chr5	124643510	124744367	chr5:124643510-124744367	0	-	124643510	124643510	8553170	4	173,88,256,284,	0,6099,57503,100573,
#Partially deleted in new
chr5	124648236	124748807	chr5:124648236-124748807	0	-	124648236	124744989	789624	5	897,88,256,1089,275,	0,1373,52777,95847,100296,
#Partially deleted in new
chr5	124648262	124746627	chr5:124648262-124746627	0	-	124648262	124744989	789624	5	871,88,256,1089,433,	0,1347,52751,95821,97932,
#Partially deleted in new
chr5	124666270	124701269	chr5:124666270-124701269	0	-	124666270	124666270	8553170	2	157,256,	0,34743,
#Partially deleted in new
chr5	124707826	124710737	chr5:124707826-124710737	3	+	124707826	124707826	8553170	3	184,53,595,	0,888,2316,
#Deleted in new
chr5	124734617	124735175	chr5:124734617-124735175	3	-	124734617	124734617	8553170	1	558,	0,
#Deleted in new
chr5	124744655	124746074	chr5:124744655-124746074	0	-	124744655	124744655	8553170	2	517,53,	0,1366,
#Deleted in new
chr5	124808827	124809233	chr5:124808827-124809233	7	-	124808827	124808827	16724991	1	406,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	124808980	124922350	chr5:124808980-124922350	3	+	124808980	124808980	8553170	4	294,235,176,881,	0,84348,110966,112489,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	124829471	124830290	chr5:124829471-124830290	3	+	124829471	124829471	8553170	1	819,	0,
#Deleted in new
chr5	124868971	124869914	chr5:124868971-124869914	3	-	124868971	124868971	8553170	1	943,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	124893359	124980772	chr5:124893359-124980772	1	+	124893359	124893359	8553170	6	204,176,156,228,143,569,	0,26587,28211,57604,57924,86844,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	124893359	125586284	chr5:124893359-125586284	1	+	124893359	124893359	8553170	7	204,83,96,97,68,116,838,	0,148797,431992,547239,626168,690187,692087,
#Partially deleted in new
chr5	124996857	125065292	chr5:124996857-125065292	0	+	124996857	124996857	8553170	4	407,112,83,190,	0,6044,45299,68245,
#Partially deleted in new
chr5	125036637	125150729	chr5:125036637-125150729	1	+	125036637	125036637	8553170	4	228,83,44,1202,	0,5519,71571,112890,
#Deleted in new
chr5	125074664	125074980	chr5:125074664-125074980	7	+	125074664	125074664	16724991	1	316,	0,
#Deleted in new
chr5	125265527	125265651	chr5:125265527-125265651	7	+	125265527	125265527	16724991	1	124,	0,
#Partially deleted in new
chr5	125325349	125367734	chr5:125325349-125367734	0	+	125325349	125325349	8553170	2	98,135,	0,42250,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	125350867	125351131	chr5:125350867-125351131	3	-	125350867	125350867	8553170	1	264,	0,
#Partially deleted in new
chr5	125376827	125377439	chr5:125376827-125377439	3	-	125376827	125376827	8553170	1	612,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	125493260	125602227	chr5:125493260-125602227	1	+	125493260	125493260	789624	4	75,181,68,1012,	0,5515,26267,107955,
#Deleted in new
chr5	125862745	125863193	chr5:125862745-125863193	7	-	125862745	125862745	16724991	1	448,	0,
#Partially deleted in new
chr5	125886284	125886753	chr5:125886284-125886753	7	-	125886284	125886284	16724991	1	469,	0,
#Partially deleted in new
chr5	125966776	125968085	chr5:125966776-125968085	7	-	125966776	125966776	16724991	2	721,100,	0,1209,
#Partially deleted in new
chr5	126179576	126193850	chr5:126179576-126193850	3	+	126179576	126179576	789624	4	190,75,50,251,	0,11567,13500,14023,
#Partially deleted in new
chr5	126360131	126493608	chr5:126360131-126493608	1	+	126360331	126492956	789624	14	328,120,112,67,104,96,72,81,112,123,88,105,94,694,	0,105294,109545,112106,113133,117560,120324,120495,123331,124270,125554,126741,128667,132783,
#Partially deleted in new
chr5	126371312	126483549	chr5:126371312-126483549	0	+	126371442	126483549	789624	9	255,120,112,67,104,96,72,81,87,	0,94113,98364,100925,101952,106379,109143,109314,112150,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	126372476	126509021	chr5:126372476-126509021	3	-	126372476	126372476	8553170	4	407,78,191,704,	0,21076,94964,135841,
#Partially deleted in new
chr5	126423145	126494371	chr5:126423145-126494371	3	+	126423606	126492956	789624	14	544,120,112,67,104,96,72,81,112,123,88,105,94,1457,	0,42280,46531,49092,50119,54546,57310,57481,60317,61256,62540,63727,65653,69769,
#Partially deleted in new
chr5	126423145	126494371	chr5:126423145-126494371	1	+	126423606	126492956	789624	14	544,120,43,67,104,96,72,81,112,126,88,105,94,1457,	0,42280,43148,49092,50119,54546,57310,57481,60317,61253,62540,63727,65653,69769,
#Partially deleted in new
chr5	126423176	126494161	chr5:126423176-126494161	1	+	126423625	126492956	789624	15	513,120,43,112,67,104,96,72,81,112,123,88,105,94,1247,	0,42249,43117,46500,49061,50088,54515,57279,57450,60286,61225,62509,63696,65622,69738,
#Partially deleted in new
chr5	126423176	126494161	chr5:126423176-126494161	1	+	126465542	126492956	789624	13	513,120,67,104,96,72,81,112,123,88,105,94,1247,	0,42249,49061,50088,54515,57279,57450,60286,61225,62509,63696,65622,69738,
#Partially deleted in new
chr5	126423405	126472304	chr5:126423405-126472304	0	+	126423405	126423405	8553170	4	284,169,112,67,	0,41971,46271,48832,
#Partially deleted in new
chr5	126423408	126469730	chr5:126423408-126469730	0	+	126423408	126423408	8553170	4	281,131,120,54,	0,22072,42017,46268,
#Partially deleted in new
chr5	126423471	126469725	chr5:126423471-126469725	0	+	126423471	126423471	8553170	4	218,110,169,49,	0,22009,41905,46205,
#Partially deleted in new
chr5	126423471	126493326	chr5:126423471-126493326	0	+	126423606	126469694	789624	15	218,120,43,112,67,104,96,72,81,112,123,88,105,94,412,	0,41954,42822,46205,48766,49793,54220,56984,57155,59991,60930,62214,63401,65327,69443,
#Partially deleted in new
chr5	126423471	126493166	chr5:126423471-126493166	0	+	126423606	126472298	789624	13	218,120,67,104,96,72,81,112,123,88,105,94,252,	0,41954,48766,49793,54220,56984,57155,59991,60930,62214,63401,65327,69443,
#Partially deleted in new
chr5	126433504	126490352	chr5:126433504-126490352	1	-	126433504	126433504	8553170	3	482,191,74,	0,33936,56774,
#Partially deleted in new
chr5	126458786	126467631	chr5:126458786-126467631	0	-	126458786	126458786	8553170	2	286,191,	0,8654,
#Partially deleted in new
chr5	126462344	126493005	chr5:126462344-126493005	1	+	126472249	126492956	789624	14	98,120,112,67,104,96,72,81,112,123,88,105,94,91,	0,3081,7332,9893,10920,15347,18111,18282,21118,22057,23341,24528,26454,30570,
#Partially deleted in new
chr5	126465145	126477783	chr5:126465145-126477783	0	+	126465145	126465145	8553170	6	75,120,112,67,104,92,	0,280,4531,7092,8119,12546,
#Partially deleted in new
chr5	126465151	126472305	chr5:126465151-126472305	0	+	126465151	126465151	8553170	3	394,112,68,	0,4525,7086,
#Partially deleted in new
chr5	126465154	126493202	chr5:126465154-126493202	1	+	126465390	126492956	789624	14	66,169,112,67,104,96,72,81,112,123,88,105,94,288,	0,222,4522,7083,8110,12537,15301,15472,18308,19247,20531,21718,23644,27760,
#Partially deleted in new
chr5	126472237	126483646	chr5:126472237-126483646	0	+	126472237	126472237	8553170	6	67,104,96,72,81,184,	0,1027,5454,8218,8389,11225,
#Partially deleted in new
chr5	126480016	126483549	chr5:126480016-126483549	0	+	126480016	126480016	8553170	3	511,81,87,	0,610,3446,
#Partially deleted in new
chr5	126480093	126485752	chr5:126480093-126485752	0	+	126480093	126480093	8553170	6	123,72,81,112,123,67,	0,362,533,3369,4308,5592,
#Partially deleted in new
chr5	126480410	126490371	chr5:126480410-126490371	1	-	126480410	126480410	8553170	3	500,137,93,	0,3968,9868,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	126492937	126496494	chr5:126492937-126496494	0	+	126492937	126492937	8553170	3	71,78,226,	0,552,3331,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	126496278	126498604	chr5:126496278-126498604	3	+	126496278	126496278	8553170	1	2326,	0,
#Partially deleted in new
chr5	126531199	126595219	chr5:126531199-126595219	1	-	126531385	126595198	789624	18	187,76,74,98,117,107,85,95,42,98,78,45,133,124,81,66,54,213,	0,15124,18729,18996,20821,23087,24731,28040,29883,37059,39582,44220,45879,51651,52732,61464,62151,63807,
#Partially deleted in new
chr5	126540416	126595196	chr5:126540416-126595196	0	-	126540915	126595196	789624	18	572,76,74,98,117,107,85,95,42,98,78,45,133,124,81,66,54,190,	0,5907,9512,9779,11604,13870,15514,18823,20666,27842,30365,35003,36662,42434,43515,52247,52934,54590,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr5	126541840	126595418	chr5:126541840-126595418	3	-	126544964	126595198	0	18	3179,76,74,98,117,107,85,95,42,98,78,45,133,124,81,66,54,412,	0,4483,8088,8355,10180,12446,14090,17399,19242,26418,28941,33579,35238,41010,42091,50823,51510,53166,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr5	126543997	126595198	chr5:126543997-126595198	0	-	126594165	126595198	789624	19	1022,76,74,98,117,107,85,95,42,98,78,45,133,124,81,66,54,160,192,	0,2326,5931,6198,8023,10289,11933,15242,17085,24261,26784,31422,33081,38853,39934,48666,49353,50110,51009,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr5	126544009	126595269	chr5:126544009-126595269	1	-	126544964	126595198	789624	16	1010,76,74,98,117,107,42,98,78,45,133,124,81,66,54,263,	0,2314,5919,6186,8011,10277,17073,24249,26772,31410,33069,38841,39922,48654,49341,50997,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr5	126544042	126595219	chr5:126544042-126595219	1	-	126544964	126595198	789624	18	977,76,74,98,117,107,85,86,42,98,78,45,133,124,81,66,54,213,	0,2281,5886,6153,7978,10244,11888,15197,17040,24216,26739,31377,33036,38808,39889,48621,49308,50964,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr5	126544089	126595225	chr5:126544089-126595225	1	-	126544964	126595198	789624	15	930,76,74,98,117,107,85,95,42,98,78,45,133,124,219,	0,2234,5839,6106,7931,10197,11841,15150,16993,24169,26692,31330,32989,38761,50917,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr5	126544149	126595219	chr5:126544149-126595219	1	-	126544964	126595198	789624	19	870,76,74,98,117,107,85,95,42,98,78,45,133,45,124,81,66,54,213,	0,2174,5779,6046,7871,10137,11781,15090,16933,24109,26632,31270,32929,37955,38701,39782,48514,49201,50857,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr5	126544152	126595362	chr5:126544152-126595362	0	-	126593405	126595198	789624	18	867,76,74,98,117,107,85,95,42,98,78,45,133,124,81,66,97,356,	0,2171,5776,6043,7868,10134,11778,15087,16930,24106,26629,31267,32926,38698,39779,48511,49198,50854,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr5	126544153	126595219	chr5:126544153-126595219	1	-	126544964	126595198	789624	16	866,76,74,98,117,107,85,95,42,98,78,45,133,124,81,213,	0,2170,5775,6042,7867,10133,11777,15086,16929,24105,26628,31266,32925,38697,39778,50853,
#Partially deleted in new
chr5	126544595	126595336	chr5:126544595-126595336	1	-	126544964	126595198	0	16	424,76,74,98,117,95,42,98,78,45,133,124,81,66,54,330,	0,1728,5333,5600,7425,14644,16487,23663,26186,30824,32483,38255,39336,48068,48755,50411,
#Partially deleted in new
chr5	126544752	126550164	chr5:126544752-126550164	0	-	126544752	126544752	8553170	3	267,76,236,	0,1571,5176,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	126544756	126562422	chr5:126544756-126562422	0	-	126544756	126544756	8553170	9	263,76,74,98,117,107,85,95,1340,	0,1567,5172,5439,7264,9530,11174,14483,16326,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	126544775	126555432	chr5:126544775-126555432	0	-	126544775	126544775	8553170	6	244,76,74,98,117,1146,	0,1548,5153,5420,7245,9511,
#Partially deleted in new
chr5	126544781	126561482	chr5:126544781-126561482	0	-	126544781	126544781	8553170	9	238,76,74,145,117,107,85,95,400,	0,1542,5147,5367,7239,9505,11149,14458,16301,
#Partially deleted in new
chr5	126544784	126595232	chr5:126544784-126595232	0	-	126594165	126595198	789624	19	235,76,74,98,117,107,85,95,42,98,78,45,133,124,81,66,97,160,226,	0,1539,5144,5411,7236,9502,11146,14455,16298,23474,25997,30635,32294,38066,39147,47879,48566,49323,50222,
#Partially deleted in new
chr5	126544818	126583977	chr5:126544818-126583977	0	-	126559327	126583977	789624	13	201,76,74,98,107,85,113,42,78,45,133,124,46,	0,1505,5110,5377,9468,11112,14421,16264,25963,30601,32260,38032,39113,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr5	126544828	126595229	chr5:126544828-126595229	0	-	126593405	126595198	789624	18	191,76,74,98,117,107,85,95,42,78,45,133,124,81,133,66,97,223,	0,1495,5100,5367,7192,9458,11102,14411,16254,25953,30591,32250,38022,39103,39534,47835,48522,50178,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr5	126544918	126584392	chr5:126544918-126584392	0	-	126544918	126544918	8553170	16	101,76,74,145,117,107,85,95,42,98,78,45,133,124,81,30,	0,1405,5010,5230,7102,9368,11012,14321,16164,23340,25863,30501,32160,37932,39013,39444,
#Partially deleted in new
chr5	126546344	126595214	chr5:126546344-126595214	0	-	126593405	126595198	789624	18	55,74,98,117,107,85,95,42,135,98,78,45,133,124,81,66,97,208,	0,3584,3851,5676,7942,9586,12895,14738,18113,21914,24437,29075,30734,36506,37587,46319,47006,48662,
#Partially deleted in new
chr5	126549503	126595093	chr5:126549503-126595093	0	-	126549503	126549503	8553170	16	499,98,117,107,85,95,42,98,78,45,133,124,81,66,54,87,	0,692,2517,4783,6427,9736,11579,18755,21278,25916,27575,33347,34428,43160,43847,45503,
#Partially deleted in new
chr5	126549891	126552102	chr5:126549891-126552102	0	-	126549891	126549891	8553170	2	402,82,	0,2129,
#Partially deleted in new
chr5	126550262	126595112	chr5:126550262-126595112	0	-	126577193	126595112	789624	11	31,117,107,85,95,42,98,78,45,133,106,	0,1758,4024,5668,8977,10820,17996,20519,25157,26816,44744,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	126553301	126553402	chr5:126553301-126553402	3	-	126553301	126553301	8553170	1	101,	0,
#Partially deleted in new
chr5	126554387	126595218	chr5:126554387-126595218	0	-	126554387	126595198	789624	12	6,85,95,42,98,78,45,133,124,81,66,212,	0,1543,4852,6695,13871,16394,21032,22691,28463,29544,38276,40619,
#Partially deleted in new
chr5	126555994	126595071	chr5:126555994-126595071	0	-	126577193	126595071	789624	8	21,56,42,98,78,45,133,65,	0,3245,5088,12264,14787,19425,21084,39012,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	126564357	126595218	chr5:126564357-126595218	1	-	126564578	126595198	789624	10	235,98,78,45,133,124,81,66,54,212,	0,3901,6424,11062,12721,18493,19574,28306,28993,30649,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	126564375	126580090	chr5:126564375-126580090	0	-	126564375	126564375	8553170	6	217,98,78,45,133,44,	0,3883,6406,11044,12703,15671,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	126567809	126571137	chr5:126567809-126571137	0	-	126567809	126567809	8553170	1	3328,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	126568039	126594318	chr5:126568039-126594318	0	-	126568039	126568039	8553170	8	317,78,45,133,124,81,66,968,	0,2742,7380,9039,14811,15892,24624,25311,
#Partially deleted in new
chr5	126568323	126595192	chr5:126568323-126595192	0	-	126568323	126595192	789624	8	33,78,45,133,124,66,54,186,	0,2458,7096,8755,14527,24340,25027,26683,
#Partially deleted in new
chr5	126575435	126595198	chr5:126575435-126595198	0	-	126577193	126595198	789624	6	29,133,81,66,54,192,	0,1643,8496,17228,17915,19571,
#Partially deleted in new
chr5	126577081	126595225	chr5:126577081-126595225	0	-	126577081	126595198	789624	5	130,124,81,54,219,	0,5769,6850,16269,17925,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	126581188	126595077	chr5:126581188-126595077	0	-	126581188	126581188	8553170	6	961,124,81,66,54,71,	0,1662,2743,11475,12162,13818,
#Partially deleted in new
chr5	126582778	126583938	chr5:126582778-126583938	0	-	126582778	126582778	8553170	2	196,7,	0,1153,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	126582952	126594439	chr5:126582952-126594439	0	-	126582952	126582952	8553170	5	22,81,66,97,332,	0,979,9711,10398,11155,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	126586126	126595227	chr5:126586126-126595227	0	-	126586126	126586126	8553170	4	2906,66,54,221,	0,6537,7224,8880,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	126591927	126594138	chr5:126591927-126594138	0	-	126591927	126591927	8553170	3	802,54,31,	0,1423,2180,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	126600267	126627252	chr5:126600267-126627252	3	+	126600962	126624844	0	5	791,614,121,84,2678,	0,3302,8096,16982,24307,
#Partially deleted in new
chr5	126600924	126604064	chr5:126600924-126604064	0	+	126600924	126600924	8553170	2	134,491,	0,2649,
#Partially deleted in new
chr5	126603560	126617333	chr5:126603560-126617333	0	+	126603560	126603560	8553170	3	623,121,84,	0,4803,13689,
#Partially deleted in new
chr5	126608356	126625209	chr5:126608356-126625209	0	+	126608356	126608356	8553170	3	128,84,635,	0,8893,16218,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	126617234	126625478	chr5:126617234-126625478	0	+	126617234	126617234	8553170	2	99,904,	0,7340,
#Deleted in new
chr5	126628018	126628319	chr5:126628018-126628319	7	-	126628018	126628018	16724991	1	301,	0,
#Partially deleted in new
chr5	126631721	126636287	chr5:126631721-126636287	3	+	126631734	126636241	789624	3	99,109,256,	0,824,4310,
#Partially deleted in new
chr5	126632533	126636242	chr5:126632533-126636242	0	+	126632533	126632533	8553170	2	121,211,	0,3498,
#Partially deleted in new
chr5	126663336	126663568	chr5:126663336-126663568	7	-	126663336	126663336	16724991	1	232,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	126737437	126737995	chr5:126737437-126737995	7	-	126737437	126737437	16724991	1	558,	0,
#Partially deleted in new
chr5	126751962	126776486	chr5:126751962-126776486	3	-	126751962	126751962	789624	4	459,176,87,192,	0,3574,10402,24332,
#Partially deleted in new
chr5	126755315	126755417	chr5:126755315-126755417	3	-	126755315	126755315	8553170	1	102,	0,
#Partially deleted in new
chr5	126776622	126837014	chr5:126776622-126837014	0	+	126777508	126815220	789624	12	1245,157,126,171,126,78,221,226,105,120,108,792,	0,28153,28948,33557,35150,38547,42299,44287,46158,49365,56071,59600,
#Partially deleted in new
chr5	126777147	126837020	chr5:126777147-126837020	3	+	126777508	126836264	0	11	720,157,126,171,126,221,226,105,120,108,798,	0,27628,28423,33032,34625,41774,43762,45633,48840,55546,59075,
#Partially deleted in new
chr5	126777152	126836571	chr5:126777152-126836571	0	+	126777152	126777152	8553170	11	92,157,126,171,126,221,226,105,120,108,349,	0,27623,28418,33027,34620,41769,43757,45628,48835,55541,59070,
#Partially deleted in new
chr5	126777160	126818979	chr5:126777160-126818979	0	+	126777160	126777160	8553170	6	92,157,126,171,126,58,	0,27615,28410,33019,34612,41761,
#Partially deleted in new
chr5	126777160	126804914	chr5:126777160-126804914	0	+	126777508	126804914	789624	3	92,507,139,	0,200,27615,
#Partially deleted in new
chr5	126777188	126819234	chr5:126777188-126819234	1	+	126777508	126819146	789624	6	679,157,126,171,126,313,	0,27587,28382,32991,34584,41733,
#Partially deleted in new
chr5	126777378	126810255	chr5:126777378-126810255	0	+	126777378	126777378	8553170	5	28,170,157,126,76,	0,319,27397,28192,32801,
#Partially deleted in new
chr5	126811712	126821081	chr5:126811712-126821081	0	+	126811712	126811712	8553170	3	186,221,172,	0,7209,9197,
#Partially deleted in new
chr5	126867713	127030808	chr5:126867713-127030808	3	-	126870632	126918171	789624	5	3078,210,205,244,459,	0,10471,47216,50270,162636,
#Partially deleted in new
chr5	126870190	126878397	chr5:126870190-126878397	0	-	126870190	126870190	8553170	2	601,213,	0,7994,
#Partially deleted in new
chr5	126898872	126914990	chr5:126898872-126914990	0	-	126898872	126898872	8553170	2	394,61,	0,16057,
#Deleted in new
chr5	126914660	126918228	chr5:126914660-126918228	1	-	126914905	126918171	789624	2	474,245,	0,3323,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	126914930	127030169	chr5:126914930-127030169	0	-	126914930	126914930	8553170	4	204,244,70,246,	0,3053,31364,114993,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	127042557	127073492	chr5:127042557-127073492	1	-	127047669	127058995	789624	5	5358,57,121,102,42,	0,10055,16324,29026,30893,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	127045358	127073480	chr5:127045358-127073480	0	-	127056452	127058995	789624	6	2557,57,110,121,102,30,	0,7254,11038,13523,26225,28092,
#Partially deleted in new
chr5	127047526	127071623	chr5:127047526-127071623	1	-	127047669	127058995	789624	4	389,57,121,40,	0,5086,11355,24057,
#Partially deleted in new
chr5	127051303	127073492	chr5:127051303-127073492	3	-	127051770	127058995	789624	5	644,57,121,102,42,	0,1309,7578,20280,22147,
#Partially deleted in new
chr5	127051303	127073467	chr5:127051303-127073467	1	-	127051385	127058995	789624	5	181,57,121,102,17,	0,1309,7578,20280,22147,
#Partially deleted in new
chr5	127051611	127058917	chr5:127051611-127058917	0	-	127051770	127058917	789624	3	240,57,36,	0,1001,7270,
#Partially deleted in new
chr5	127052381	127073492	chr5:127052381-127073492	1	-	127052603	127058995	789624	4	288,121,102,42,	0,6500,19202,21069,
#Partially deleted in new
chr5	127058752	127073389	chr5:127058752-127073389	0	-	127058752	127058752	8553170	4	250,102,96,300,	0,12831,13244,14337,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	127073586	127075604	chr5:127073586-127075604	3	+	127073586	127073586	8553170	1	2018,	0,
#Deleted in new
chr5	127143081	127143247	chr5:127143081-127143247	7	-	127143081	127143081	16724991	1	166,	0,
#Partially deleted in new
chr5	127170534	127172266	chr5:127170534-127172266	7	-	127170534	127170534	16724991	1	1732,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	127176695	127177050	chr5:127176695-127177050	7	-	127176695	127176695	16724991	1	355,	0,
#Deleted in new
chr5	127179755	127179900	chr5:127179755-127179900	7	-	127179755	127179755	16724991	1	145,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	127215158	127229580	chr5:127215158-127229580	3	-	127215158	127215158	8553170	3	40,1815,340,	0,11945,14082,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	127227616	127229772	chr5:127227616-127229772	0	-	127227616	127227616	8553170	2	1302,58,	0,2098,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	127227616	127229809	chr5:127227616-127229809	0	-	127227616	127227616	8553170	2	1302,126,	0,2067,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	127227616	127229754	chr5:127227616-127229754	0	-	127227616	127227616	8553170	3	537,58,40,	0,1244,2098,
#Partially deleted in new
chr5	127290830	127461222	chr5:127290830-127461222	3	+	127331308	127457318	789624	25	226,134,102,101,93,247,121,137,213,175,121,164,103,147,135,129,129,129,129,237,128,124,45,207,4095,	0,40460,48289,49699,79079,105701,107845,111715,119558,126807,128289,129213,131839,142532,143856,144530,147608,149908,152167,154626,156726,158268,163735,164570,166297,
#Partially deleted in new
chr5	127290845	127424781	chr5:127290845-127424781	1	+	127331308	127424349	789624	14	211,134,102,101,93,247,121,137,213,175,121,164,103,443,	0,40445,48274,49684,79064,105686,107830,111700,119543,126792,128274,129198,131824,133493,
#Partially deleted in new
chr5	127290846	127424604	chr5:127290846-127424604	1	+	127331308	127424349	789624	15	210,51,134,102,101,93,247,121,137,213,175,121,164,103,266,	0,9149,40444,48273,49683,79063,105685,107829,111699,119542,126791,128273,129197,131823,133492,
#Partially deleted in new
chr5	127290858	127461222	chr5:127290858-127461222	1	+	127331308	127457318	789624	26	198,51,134,102,101,93,247,121,137,213,175,121,164,103,147,135,129,129,129,129,237,128,124,45,207,4095,	0,9137,40432,48261,49671,79051,105673,107817,111687,119530,126779,128261,129185,131811,142504,143828,144502,147580,149880,152139,154598,156698,158240,163707,164542,166269,
#Partially deleted in new
chr5	127409591	127417669	chr5:127409591-127417669	0	+	127409591	127409591	8553170	3	297,213,32,	0,797,8046,
#Deleted in new
chr5	127422691	127440847	chr5:127422691-127440847	0	+	127422691	127422691	8553170	5	81,135,129,129,109,	0,11995,12669,15747,18047,
#Partially deleted in new
chr5	127444412	127445544	chr5:127444412-127445544	0	+	127444412	127444412	8553170	2	375,88,	0,1044,
#Partially deleted in new
chr5	127445251	127455562	chr5:127445251-127455562	0	+	127445251	127445251	8553170	6	138,89,128,124,45,162,	0,353,2305,3847,9314,10149,
#Partially deleted in new
chr5	127445476	127449202	chr5:127445476-127449202	0	+	127445476	127445476	8553170	3	217,128,104,	0,2080,3622,
#Partially deleted in new
chr5	127447627	127465737	chr5:127447627-127465737	0	+	127447627	127447627	8553170	5	57,124,45,207,132,	0,1471,6938,7773,17978,
#Deleted in new
chr5	127465821	127466118	chr5:127465821-127466118	7	+	127465821	127465821	16724991	1	297,	0,
#Deleted in new
chr5	127478294	127478737	chr5:127478294-127478737	3	+	127478294	127478294	8553170	1	443,	0,
#Deleted in new
chr5	127511463	127512842	chr5:127511463-127512842	7	-	127511463	127511463	16724991	1	1379,	0,
#Partially deleted in new
chr5	127517608	127555089	chr5:127517608-127555089	3	+	127523479	127551916	789624	9	168,123,390,161,103,164,104,103,3383,	0,5851,6922,9009,12685,16014,21431,30210,34098,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	127517639	127524025	chr5:127517639-127524025	0	+	127517639	127517639	8553170	2	137,566,	0,5820,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	127517650	127552151	chr5:127517650-127552151	1	+	127523479	127548050	789624	8	126,123,390,161,103,164,104,4333,	0,5809,6880,8967,12643,15972,21389,30168,
#Partially deleted in new
chr5	127517655	127555081	chr5:127517655-127555081	1	+	127523479	127553885	789624	10	121,123,390,161,103,164,104,103,172,1285,	0,5804,6875,8962,12638,15967,21384,30163,34051,36141,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	127517945	127524108	chr5:127517945-127524108	0	+	127517945	127517945	8553170	2	54,649,	0,5514,
#Partially deleted in new
chr5	127547834	127552456	chr5:127547834-127552456	0	+	127547834	127547834	8553170	2	87,750,	0,3872,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	127588745	127590710	chr5:127588745-127590710	3	-	127588745	127588745	8553170	2	1333,412,	0,1553,
#Partially deleted in new
chr5	127649043	127658630	chr5:127649043-127658630	3	+	127657521	127657767	789624	3	345,107,1208,	0,4273,8379,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	127651692	127664029	chr5:127651692-127664029	3	-	127651692	127651692	8553170	4	129,109,145,164,	0,560,11931,12173,
#Deleted in new
chr5	127653014	127653691	chr5:127653014-127653691	0	+	127653014	127653014	8553170	2	177,375,	0,302,
#Partially deleted in new
chr5	127653048	127658630	chr5:127653048-127658630	1	+	127657521	127657767	789624	3	143,107,1208,	0,268,4374,
#Deleted in new
chr5	127657422	127658630	chr5:127657422-127658630	1	+	127657521	127657767	789624	1	1208,	0,
#Partially deleted in new
chr5	127703388	127941634	chr5:127703388-127941634	3	+	127703388	127941468	789624	7	119,52,108,132,57,124,453,	0,4320,50879,93714,94717,172149,237793,
#Deleted in new
chr5	127784617	127787042	chr5:127784617-127787042	7	-	127784617	127784617	16724991	1	2425,	0,
#Partially deleted in new
chr5	127935242	127941507	chr5:127935242-127941507	0	+	127935242	127935242	8553170	2	337,326,	0,5939,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	127940425	128083100	chr5:127940425-128083100	3	-	127940425	127940425	789624	4	795,118,101,366,	0,16378,120718,142309,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	127941004	128083028	chr5:127941004-128083028	0	-	127941004	127941004	8553170	4	216,118,101,59,	0,15799,120139,141965,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	127965887	128082974	chr5:127965887-128082974	1	-	127965887	127965887	8553170	4	1041,101,219,240,	0,95256,116085,116847,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	127966548	128083075	chr5:127966548-128083075	1	-	127966548	127966548	8553170	4	380,101,127,341,	0,94595,95825,116186,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	127966672	128083090	chr5:127966672-128083090	1	-	127966672	127966672	8553170	4	256,101,131,121,	0,94471,95697,116297,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	127966734	128082881	chr5:127966734-128082881	0	-	127966734	127966734	8553170	3	194,147,147,	0,110212,116000,
#Partially deleted in new
chr5	128002528	128024160	chr5:128002528-128024160	0	-	128002528	128002528	8553170	2	294,26,	0,21606,
#Deleted in new
chr5	128002694	128003988	chr5:128002694-128003988	0	-	128002694	128002694	8553170	2	128,345,	0,949,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	128021527	128083074	chr5:128021527-128083074	1	-	128021527	128021527	789624	3	2771,101,105,	0,39616,61442,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	128024026	128082960	chr5:128024026-128082960	1	-	128024026	128024026	8553170	5	272,101,147,222,226,	0,37117,52920,57946,58708,
#Partially deleted in new
chr5	128060583	128083172	chr5:128060583-128083172	0	-	128060583	128060583	8553170	3	61,101,438,	0,560,22151,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr5	128083765	128189688	chr5:128083765-128189688	3	+	128083954	128186631	789624	27	945,120,76,96,140,111,109,128,85,152,108,124,102,156,100,112,141,107,80,126,48,123,112,87,136,68,3193,	0,29048,30446,30820,47301,50399,51934,54831,55058,58064,63856,64988,66231,67475,68940,74287,77894,83995,87901,90775,93339,94801,97117,99089,100600,101023,102730,
#Partially deleted in new
chr5	128083790	128187025	chr5:128083790-128187025	0	+	128083954	128184740	789624	27	920,120,76,96,140,111,109,128,85,152,108,124,102,156,100,112,141,107,80,126,48,123,112,87,136,134,530,	0,29023,30421,30795,47276,50374,51909,54806,55033,58039,63831,64963,66206,67450,68915,74262,77869,83970,87876,90750,93314,94776,97092,99064,100575,100932,102705,
#Partially deleted in new
chr5	128083790	128184740	chr5:128083790-128184740	1	+	128083954	128184740	789624	26	920,120,76,96,140,111,109,128,85,152,108,124,102,156,100,112,141,107,80,126,48,123,112,87,136,18,	0,29023,30421,30795,47276,50374,51909,54806,55033,58039,63831,64963,66206,67450,68915,74262,77869,83970,87876,90750,93314,94776,97092,99064,100575,100932,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr5	128083847	128188442	chr5:128083847-128188442	1	+	128083954	128186631	789624	26	863,120,76,96,140,111,109,128,85,152,108,124,102,156,100,112,141,107,80,126,123,112,87,136,68,1947,	0,28966,30364,30738,47219,50317,51852,54749,54976,57982,63774,64906,66149,67393,68858,74205,77812,83913,87819,90693,94719,97035,99007,100518,100941,102648,
#Deleted in new
chr5	128109485	128110994	chr5:128109485-128110994	7	+	128109485	128109485	16724991	1	1509,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	128157987	128171095	chr5:128157987-128171095	0	+	128157987	128157987	8553170	3	177,141,3335,	0,3672,9773,
#Partially deleted in new
chr5	128158048	128171882	chr5:128158048-128171882	0	+	128158048	128158048	8553170	4	116,141,107,216,	0,3611,9712,13618,
#Partially deleted in new
chr5	128177548	128184507	chr5:128177548-128184507	0	+	128177548	128177548	8553170	5	91,123,112,87,142,	0,1018,3334,5306,6817,
#Partially deleted in new
chr5	128178379	128182921	chr5:128178379-128182921	0	+	128178379	128178379	8553170	3	310,112,67,	0,2503,4475,
#Partially deleted in new
chr5	128257908	128538042	chr5:128257908-128538042	1	-	128259454	128537603	789624	65	1921,172,232,120,129,117,123,126,207,126,132,123,120,126,66,153,126,120,129,117,126,126,126,69,153,126,126,69,162,123,123,126,123,123,126,126,123,126,126,129,126,228,126,51,138,120,126,126,54,153,123,123,126,120,138,234,153,126,126,198,96,96,99,83,693,	0,3827,5516,14090,15931,16658,18129,19971,20726,22283,28809,29399,30529,31218,31973,32823,33620,42908,43473,45064,47048,47602,47914,49226,51338,52074,53391,53976,54725,60240,60970,70787,72664,75003,76810,77261,77546,78079,80088,81024,86476,87448,91438,92046,92959,99367,103814,106691,108468,111273,116719,118822,119843,120862,134109,135226,137213,150765,188572,206815,261364,269963,272686,278493,279441,
#Boundary problem: need 71, got 0, diff 71, mapped 0.0
chr5	128258036	128659185	chr5:128258036-128659185	3	-	128259454	128537603	789624	71	1793,172,232,120,129,117,123,126,207,126,132,123,120,126,66,153,126,120,129,117,126,126,126,69,153,126,126,69,162,123,123,126,123,123,126,126,123,126,126,129,126,228,126,51,138,120,126,126,54,153,123,123,126,120,138,234,153,126,126,198,96,96,99,83,693,126,99,50,50,124,87,	0,3699,5388,13962,15803,16530,18001,19843,20598,22155,28681,29271,30401,31090,31845,32695,33492,42780,43345,44936,46920,47474,47786,49098,51210,51946,53263,53848,54597,60112,60842,70659,72536,74875,76682,77133,77418,77951,79960,80896,86348,87320,91310,91918,92831,99239,103686,106563,108340,111145,116591,118694,119715,120734,133981,135098,137085,150637,188444,206687,261236,269835,272558,278365,279313,281414,282450,284798,382325,388886,401062,
#Partially deleted in new
chr5	128258036	128537603	chr5:128258036-128537603	1	-	128259454	128537603	789624	67	1793,172,232,120,129,117,123,126,207,126,132,123,120,126,66,153,126,120,129,117,126,126,126,69,153,126,126,69,162,123,123,126,123,123,126,126,123,126,126,129,126,228,126,51,138,120,126,126,54,153,123,123,126,120,138,234,153,126,126,198,43,9,41,96,99,83,254,	0,3699,5388,13962,15803,16530,18001,19843,20598,22155,28681,29271,30401,31090,31845,32695,33492,42780,43345,44936,46920,47474,47786,49098,51210,51946,53263,53848,54597,60112,60842,70659,72536,74875,76682,77133,77418,77951,79960,80896,86348,87320,91310,91918,92831,99239,103686,106563,108340,111145,116591,118694,119715,120734,133981,135098,137085,150637,188444,206687,261236,261280,261291,269835,272558,278365,279313,
#Deleted in new
chr5	128328069	128339191	chr5:128328069-128339191	1	-	128328645	128338954	789624	9	752,123,123,126,126,123,126,126,259,	0,2503,4842,6649,7100,7385,7918,9927,10863,
#Partially deleted in new
chr5	128328298	128537821	chr5:128328298-128537821	1	-	128328645	128537603	789624	33	523,123,123,126,126,123,126,126,129,126,228,126,51,138,120,126,126,54,153,123,123,126,120,138,234,153,126,126,198,96,96,83,472,	0,2274,4613,6420,6871,7156,7689,9698,10634,16086,17058,21048,21656,22569,28977,33424,36301,38078,40883,46329,48432,49453,50472,63719,64836,66823,80375,118182,136425,190974,199573,208103,209051,
#Partially deleted in new
chr5	128365169	128377821	chr5:128365169-128377821	0	-	128365169	128365169	8553170	6	219,54,153,123,123,70,	0,1207,4012,9458,11561,12582,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	128371098	128371212	chr5:128371098-128371212	3	-	128371098	128371098	8553170	1	114,	0,
#Partially deleted in new
chr5	128441997	128538223	chr5:128441997-128538223	0	-	128442298	128537603	789624	8	375,126,198,96,96,99,83,874,	0,4483,22726,77275,85874,88597,94404,95352,
#Partially deleted in new
chr5	128446075	128538223	chr5:128446075-128538223	0	-	128446075	128446075	8553170	7	531,198,96,96,99,83,874,	0,18648,73197,81796,84519,90326,91274,
#Partially deleted in new
chr5	128538012	129015944	chr5:128538012-129015944	0	+	128985194	129015944	789624	7	56,121,86,204,159,125,60,	0,307567,315961,447120,450587,452327,477872,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	128663977	128742829	chr5:128663977-128742829	3	+	128663977	128663977	8553170	2	69,393,	0,78459,
#Partially deleted in new
chr5	128965127	129033631	chr5:128965127-129033631	3	+	128966137	129033282	789624	10	1491,204,159,125,195,91,199,98,131,526,	0,20005,23472,25212,50757,58492,62005,63217,64449,67978,
#Partially deleted in new
chr5	128965516	129033642	chr5:128965516-129033642	1	+	128966137	129033282	789624	11	236,641,204,159,125,195,91,199,98,131,537,	0,461,19616,23083,24823,50368,58103,61616,62828,64060,67589,
#Partially deleted in new
chr5	128965527	129033282	chr5:128965527-129033282	1	+	128966137	129033282	789624	11	170,745,204,159,125,195,91,199,98,131,177,	0,346,19605,23072,24812,50357,58092,61605,62817,64049,67578,
#Partially deleted in new
chr5	129094750	129114028	chr5:129094750-129114028	3	+	129094766	129113001	789624	5	325,120,204,117,1174,	0,10205,10434,12195,18104,
#Partially deleted in new
chr5	129094750	129105347	chr5:129094750-129105347	0	+	129094766	129105347	789624	3	298,120,163,	0,10205,10434,
#Deleted in new
chr5	129097687	129097766	chr5:129097687-129097766	3	+	129097687	129097687	5263520	1	79,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	129397061	129397147	chr5:129397061-129397147	3	-	129397061	129397061	5263520	1	86,	0,
#Deleted in new
chr5	129459558	129460689	chr5:129459558-129460689	3	-	129459558	129459558	789624	2	521,265,	0,866,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr5	129460264	129738683	chr5:129460264-129738683	1	+	129460391	129737218	789624	23	218,656,166,173,84,158,44,106,141,151,102,131,173,128,121,81,158,154,136,205,153,178,1617,	0,837,48812,66019,67483,68255,91599,136294,160353,161933,181594,187500,188533,194041,198352,205234,219499,223855,234455,241123,243974,274667,276802,
#Partially deleted in new
chr5	129460280	129527831	chr5:129460280-129527831	0	+	129460391	129509099	789624	4	202,166,232,84,	0,48796,66003,67467,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr5	129460409	129738683	chr5:129460409-129738683	3	+	129460409	129737218	789624	23	73,656,166,173,84,158,44,106,141,151,102,131,173,128,121,81,158,154,136,205,153,178,1617,	0,692,48667,65874,67338,68110,91454,136149,160208,161788,181449,187355,188388,193896,198207,205089,219354,223710,234310,240978,243829,274522,276657,
#Partially deleted in new
chr5	129461675	129528543	chr5:129461675-129528543	0	+	129461675	129526471	789624	5	82,166,232,84,24,	0,47401,64608,66072,66844,
#Partially deleted in new
chr5	129500360	129905917	chr5:129500360-129905917	3	-	129500360	129500360	8553170	5	227,120,163,49,72,	0,234582,262146,399100,405485,
#Partially deleted in new
chr5	129688099	129735048	chr5:129688099-129735048	0	+	129688099	129688099	8553170	5	115,136,205,153,117,	0,6620,13288,16139,46832,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	129748078	129766732	chr5:129748078-129766732	3	+	129748190	129765063	789624	3	277,228,1849,	0,12299,16805,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	129762492	129905661	chr5:129762492-129905661	1	-	129762492	129762492	8553170	4	177,154,49,82,	0,17835,136968,143087,
#Partially deleted in new
chr5	129904471	130186634	chr5:129904471-130186634	3	+	129904829	130185791	789624	3	1160,284,2406,	0,3605,279757,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	129908086	130184502	chr5:129908086-130184502	0	+	129908086	129908086	8553170	3	274,88,274,	0,143997,276142,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	129974890	129975001	chr5:129974890-129975001	3	+	129974890	129974890	8553170	1	111,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	130114408	130114510	chr5:130114408-130114510	7	+	130114408	130114408	16724991	1	102,	0,
#Deleted in new
chr5	130140030	130141950	chr5:130140030-130141950	7	+	130140030	130140030	16724991	1	1920,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	130386620	130386680	chr5:130386620-130386680	3	-	130386620	130386620	8553170	1	60,	0,
#Deleted in new
chr5	130529418	130529889	chr5:130529418-130529889	7	+	130529418	130529418	16724991	1	471,	0,
#Partially deleted in new
chr5	130598347	130598779	chr5:130598347-130598779	7	+	130598347	130598347	16724991	1	432,	0,
#Deleted in new
chr5	130989896	130990428	chr5:130989896-130990428	7	+	130989896	130989896	16724991	1	532,	0,
#Deleted in new
chr5	130994252	130996164	chr5:130994252-130996164	7	+	130994252	130994252	16724991	1	1912,	0,
#Partially deleted in new
chr5	131008582	131008742	chr5:131008582-131008742	7	+	131008582	131008582	16724991	1	160,	0,
#Partially deleted in new
chr5	131159026	131165485	chr5:131159026-131165485	3	-	131159446	131165205	0	3	585,105,391,	0,3545,6068,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	131159284	131165240	chr5:131159284-131165240	0	-	131162381	131165205	789624	5	327,229,116,105,146,	0,1371,3077,3287,5810,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	131159287	131165301	chr5:131159287-131165301	0	-	131160823	131165205	789624	4	324,189,105,207,	0,1368,3284,5807,
#Partially deleted in new
chr5	131159334	131165333	chr5:131159334-131165333	0	-	131162624	131165205	789624	3	277,105,274,	0,3237,5725,
#Partially deleted in new
chr5	131159477	131171735	chr5:131159477-131171735	0	-	131159477	131159477	8553170	3	134,105,130,	0,3094,12128,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	131159603	131165220	chr5:131159603-131165220	0	-	131162624	131165205	789624	5	8,229,116,105,161,	0,1052,2758,2968,5456,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	131162110	131165325	chr5:131162110-131165325	1	-	131162381	131165205	789624	3	367,105,231,	0,461,2984,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	131162242	131165341	chr5:131162242-131165341	1	-	131162550	131165205	789624	2	434,247,	0,2852,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	131162290	131165256	chr5:131162290-131165256	1	-	131162624	131165205	789624	2	386,197,	0,2769,
#Deleted in new
chr5	131162477	131162627	chr5:131162477-131162627	0	-	131162477	131162627	789624	2	26,56,	0,94,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	131170809	131205426	chr5:131170809-131205426	3	+	131171020	131199601	789624	5	229,73,71,82,5896,	0,9285,11419,16218,28721,
#Partially deleted in new
chr5	131170943	131199966	chr5:131170943-131199966	1	+	131171020	131199601	789624	3	95,73,436,	0,9151,28587,
#Partially deleted in new
chr5	131170988	131199653	chr5:131170988-131199653	1	+	131171020	131199560	789624	4	50,73,71,123,	0,9106,11240,28542,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	131202639	131203701	chr5:131202639-131203701	0	+	131202639	131202639	8553170	2	174,111,	0,951,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	131245492	131359336	chr5:131245492-131359336	0	+	131245492	131245492	8553170	4	107,135,169,128,	0,9602,70483,113716,
#Partially deleted in new
chr5	131253026	131359222	chr5:131253026-131359222	0	+	131253026	131253026	8553170	3	103,169,14,	0,62949,106182,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	131253052	131255583	chr5:131253052-131255583	0	+	131253052	131253052	8553170	2	77,489,	0,2042,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	131261320	131261607	chr5:131261320-131261607	3	-	131261320	131261320	8553170	1	287,	0,
#Partially deleted in new
chr5	131263665	131359262	chr5:131263665-131359262	0	+	131263665	131263665	8553170	3	235,169,54,	0,52310,95543,
#Partially deleted in new
chr5	131264008	131394687	chr5:131264008-131394687	3	+	131359493	131391091	789624	5	158,339,102,116,2770,	0,95200,121534,126984,127909,
#Partially deleted in new
chr5	131264061	131359382	chr5:131264061-131359382	0	+	131264061	131264061	8553170	4	105,169,119,174,	0,51914,90589,95147,
#Partially deleted in new
chr5	131264067	131393106	chr5:131264067-131393106	1	+	131385569	131391091	789624	6	99,169,350,102,116,1189,	0,51908,95141,121475,126925,127850,
#Partially deleted in new
chr5	131264074	131394690	chr5:131264074-131394690	1	+	131359493	131391091	789624	6	92,169,339,102,116,2773,	0,51901,95134,121468,126918,127843,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	131264099	131394667	chr5:131264099-131394667	1	+	131359493	131391091	789624	5	67,169,339,102,3675,	0,51876,95109,121443,126893,
#Partially deleted in new
chr5	131385605	131398446	chr5:131385605-131398446	0	+	131385605	131398334	789624	2	39,238,	0,12603,
#Partially deleted in new
chr5	131392200	131398445	chr5:131392200-131398445	0	+	131392200	131392200	8553170	3	67,106,237,	0,1185,6008,
#Partially deleted in new
chr5	131396405	131398447	chr5:131396405-131398447	0	+	131396405	131396405	8553170	2	255,239,	0,1803,
#Partially deleted in new
chr5	131423920	131635236	chr5:131423920-131635236	3	-	131427265	131635030	0	28	3371,315,491,229,135,189,221,124,212,384,241,158,241,109,204,108,165,153,159,137,178,132,144,70,84,57,71,275,	0,4981,6938,9509,15660,18428,22562,29133,31880,37784,40120,48666,55592,65625,68661,71632,74522,80705,81443,84150,86393,97469,124126,138057,168462,179350,180702,211041,
#Partially deleted in new
chr5	131425886	131447401	chr5:131425886-131447401	0	-	131425886	131425886	8553170	7	1405,315,491,229,135,189,919,	0,3015,4972,7543,13694,16462,20596,
#Partially deleted in new
chr5	131425890	131796983	chr5:131425890-131796983	3	-	131427265	131796921	789624	29	1401,315,491,229,135,189,221,124,212,384,241,158,241,109,204,108,165,153,159,137,178,132,144,70,84,57,71,127,154,	0,3011,4968,7539,13690,16458,20592,27163,29910,35814,38150,46696,53622,63655,66691,69662,72552,78735,79473,82180,84423,95499,122156,136087,166492,177380,178732,318673,370939,
#Partially deleted in new
chr5	131426235	131635212	chr5:131426235-131635212	1	-	131427265	131635030	0	29	1056,491,229,135,189,221,24,124,212,384,241,15,158,241,109,204,108,165,153,159,137,178,132,144,70,84,57,71,251,	0,4623,7194,13345,16113,20247,23787,26818,29565,35469,37805,43565,46351,53277,63310,66346,69317,72207,78390,79128,81835,84078,95154,121811,135742,166147,177035,178387,208726,
#Partially deleted in new
chr5	131426558	131635111	chr5:131426558-131635111	1	-	131427265	131635030	0	29	733,315,491,229,135,189,221,24,124,212,384,241,158,241,109,204,108,165,153,159,137,178,132,144,70,84,57,71,150,	0,2343,4300,6871,13022,15790,19924,23464,26495,29242,35146,37482,46028,52954,62987,66023,68994,71884,78067,78805,81512,83755,94831,121488,135419,165824,176712,178064,208403,
#Partially deleted in new
chr5	131427215	131635159	chr5:131427215-131635159	1	-	131427265	131635030	0	28	76,491,229,135,189,221,24,124,212,384,241,158,241,109,204,108,165,153,159,137,178,132,144,70,84,57,71,198,	0,3643,6214,12365,15133,19267,22807,25838,28585,34489,36825,45371,52297,62330,65366,68337,71227,77410,78148,80855,83098,94174,120831,134762,165167,176055,177407,207746,
#Partially deleted in new
chr5	131435760	131508157	chr5:131435760-131508157	1	-	131435950	131508157	789624	18	621,135,189,221,24,124,212,384,241,158,241,109,204,108,165,153,159,87,	0,3820,6588,10722,14262,17293,20040,25944,28280,36826,43752,53785,56821,59792,62682,68865,69603,72310,
#Partially deleted in new
chr5	131435950	131635030	chr5:131435950-131635030	1	-	131435950	131635030	0	25	431,135,189,221,124,212,384,241,158,241,109,204,108,165,153,159,137,178,132,144,70,84,57,71,69,	0,3630,6398,10532,17103,19850,25754,28090,36636,43562,53595,56631,59602,62492,68675,69413,72120,74363,85439,112096,126027,156432,167320,168672,199011,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr5	131436289	131635213	chr5:131436289-131635213	0	-	131440223	131635030	789624	26	92,135,83,189,221,124,212,384,241,158,241,109,204,108,165,153,159,137,178,132,144,70,84,57,71,252,	0,3291,3856,6059,10193,16764,19511,25415,27751,36297,43223,53256,56292,59263,62153,68336,69074,71781,74024,85100,111757,125688,156093,166981,168333,198672,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	131440030	131440196	chr5:131440030-131440196	3	-	131440030	131440030	8553170	1	166,	0,
#Partially deleted in new
chr5	131463614	131635231	chr5:131463614-131635231	1	-	131464036	131635030	0	18	667,158,241,109,204,108,165,153,159,137,178,132,144,70,84,57,71,270,	0,8972,15898,25931,28967,31938,34828,41011,41749,44456,46699,57775,84432,98363,128768,139656,141008,171347,
#Partially deleted in new
chr5	131464049	131472920	chr5:131464049-131472920	0	-	131464049	131464049	8553170	3	232,15,334,	0,5751,8537,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr5	131472089	131533006	chr5:131472089-131533006	0	-	131472089	131472089	8553170	14	655,141,109,204,108,76,153,159,137,178,9,132,94,45,	0,7523,17456,20492,23463,26353,32536,33274,35981,38224,39203,49300,60011,60872,
#Partially deleted in new
chr5	131505481	131533033	chr5:131505481-131533033	0	-	131505481	131521500	789624	5	41,137,178,132,72,	0,2589,4832,15908,27480,
#Partially deleted in new
chr5	131508104	131533006	chr5:131508104-131533006	0	-	131508104	131532154	789624	5	103,178,132,94,45,	0,2209,13285,23996,24857,
#Partially deleted in new
chr5	131508122	131532247	chr5:131508122-131532247	0	-	131508122	131532154	789624	4	85,178,132,147,	0,2191,13267,23978,
#Partially deleted in new
chr5	131548095	131592436	chr5:131548095-131592436	0	-	131548095	131548095	8553170	2	95,54,	0,44287,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr5	131641713	131796950	chr5:131641713-131796950	1	-	131644684	131796921	789624	17	3050,116,198,169,1420,170,147,86,202,136,72,84,92,75,101,127,121,	0,5376,10088,28749,29791,35989,37315,57203,62351,64697,67487,68864,74851,77272,77603,102850,155116,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr5	131641713	131796921	chr5:131641713-131796921	1	-	131644684	131796921	789624	17	3050,116,198,169,1420,170,147,86,202,136,72,92,75,101,135,127,92,	0,5376,10088,28749,29791,35989,37315,57203,62351,64697,67487,74851,77272,77603,89190,102850,155116,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr5	131641714	131797063	chr5:131641714-131797063	1	-	131644684	131709258	789624	19	3049,116,198,169,1157,239,170,147,86,202,136,72,84,92,75,101,135,127,234,	0,5375,10087,28748,29790,30971,35988,37314,57202,62350,64696,67486,68863,74850,77271,77602,89189,102849,155115,
#Partially deleted in new
chr5	131644436	131797017	chr5:131644436-131797017	3	-	131644684	131796921	789624	18	327,116,198,169,1420,170,147,86,202,136,72,84,92,75,101,135,127,188,	0,2653,7365,26026,27068,33266,34592,54480,59628,61974,64764,66141,72128,74549,74880,86467,100127,152393,
#Partially deleted in new
chr5	131677596	131797016	chr5:131677596-131797016	1	-	131677694	131796921	789624	13	276,147,86,202,136,72,84,92,75,101,135,127,187,	0,1432,21320,26468,28814,31604,32981,38968,41389,41720,53307,66967,119233,
#Deleted in new
chr5	131795607	131796980	chr5:131795607-131796980	0	-	131795607	131795607	8553170	1	1373,	0,
#Deleted in new
chr5	131797414	131797929	chr5:131797414-131797929	3	+	131797414	131797414	8553170	1	515,	0,
#Partially deleted in new
chr5	131806992	131945698	chr5:131806992-131945698	1	-	131807235	131945505	789624	12	266,124,81,71,65,40,120,129,61,88,94,299,	0,11747,47761,71985,104822,109893,114829,126520,135642,137672,138163,138407,
#Partially deleted in new
chr5	131807122	131879020	chr5:131807122-131879020	0	-	131807235	131879020	789624	4	136,124,120,47,	0,11617,44141,71851,
#Partially deleted in new
chr5	131807142	131994278	chr5:131807142-131994278	3	-	131947614	131994225	8553170	31	116,124,120,81,65,40,120,129,61,88,94,79,72,102,144,117,89,73,96,135,135,78,74,52,33,179,100,102,65,115,248,	0,11597,44121,47611,104672,109743,114679,126370,135492,137522,138013,140441,152393,153377,155392,159273,160797,162985,164407,165581,166123,167615,169505,178264,179679,180905,181662,182264,182957,183710,186888,
#Partially deleted in new
chr5	131807235	131945698	chr5:131807235-131945698	3	-	131807235	131945505	789624	13	23,124,120,81,71,65,40,120,129,61,88,94,299,	0,11504,44028,47518,71742,104579,109650,114586,126277,135399,137429,137920,138164,
#Partially deleted in new
chr5	131878904	131921938	chr5:131878904-131921938	0	-	131878904	131878904	8553170	4	144,65,40,117,	0,32910,37981,42917,
#Partially deleted in new
chr5	131916896	131944792	chr5:131916896-131944792	0	-	131916896	131916896	8553170	5	29,120,129,61,128,	0,4925,16616,25738,27768,
#Partially deleted in new
chr5	131944407	131968220	chr5:131944407-131968220	3	+	131944407	131944407	8553170	3	117,183,262,	0,15197,23551,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr5	131949972	132011662	chr5:131949972-132011662	1	-	131954233	132011553	789624	21	4399,72,102,144,117,89,73,96,135,135,78,74,52,33,179,100,102,65,115,221,158,	0,9563,10547,12562,16443,17967,20155,21577,22751,23293,24920,26675,35434,36849,38075,38832,39434,40127,40880,44058,61532,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr5	131949975	132011914	chr5:131949975-132011914	1	-	131954233	131994225	789624	20	4396,72,102,144,117,89,73,96,135,93,74,52,33,179,100,102,65,115,116,145,	0,9560,10544,12559,16440,17964,20152,21574,22748,23290,26672,35431,36846,38072,38829,39431,40124,40877,44160,61794,
#Partially deleted in new
chr5	131953897	132011890	chr5:131953897-132011890	1	-	131954233	131994225	789624	20	474,72,102,144,117,89,73,96,135,93,74,52,33,179,100,102,65,115,116,70,	0,5638,6622,8637,12518,14042,16230,17652,18826,19368,22750,31509,32924,34150,34907,35509,36202,36955,40238,57923,
#Partially deleted in new
chr5	131953901	132011613	chr5:131953901-132011613	3	-	131954233	132011553	789624	21	470,72,102,144,117,89,73,96,135,135,78,74,52,33,179,100,102,65,115,221,109,	0,5634,6618,8633,12514,14038,16226,17648,18822,19364,20856,22746,31505,32920,34146,34903,35505,36198,36951,40129,57603,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	131953903	131974035	chr5:131953903-131974035	0	-	131953903	131953903	8553170	10	468,72,102,144,117,89,73,96,135,770,	0,5632,6616,8631,12512,14036,16224,17646,18820,19362,
#Partially deleted in new
chr5	131953904	132012086	chr5:131953904-132012086	1	-	131954233	132011920	789624	21	467,72,102,144,117,89,73,96,135,135,78,74,52,33,179,100,102,65,115,221,173,	0,5631,6615,8630,12511,14035,16223,17645,18819,19361,20988,22743,31502,32917,34143,34900,35502,36195,36948,40126,58009,
#Partially deleted in new
chr5	131953906	131999624	chr5:131953906-131999624	1	-	131954233	131994225	789624	21	465,72,102,144,117,89,73,96,135,135,78,74,52,33,179,100,102,65,115,221,211,	0,5629,6613,8628,12509,14033,16221,17643,18817,19359,20851,22741,31500,32915,34141,34898,35500,36193,36946,40124,45507,
#Partially deleted in new
chr5	131953933	131994579	chr5:131953933-131994579	1	-	131954233	131994225	789624	21	438,72,102,144,117,89,73,96,135,135,78,74,52,33,179,100,102,65,115,221,128,	0,5602,6586,8601,12482,14006,16194,17616,18790,19332,20959,22714,31473,32888,34114,34871,35473,36166,36919,40097,40518,
#Partially deleted in new
chr5	131954233	131994251	chr5:131954233-131994251	1	-	131954233	131994225	789624	21	138,72,102,144,117,89,73,96,135,135,78,74,52,33,179,45,100,102,65,115,116,	0,5302,6286,8301,12182,13706,15894,17316,18490,19032,20659,22414,31173,32588,33814,34322,34571,35173,35866,36619,39902,
#Partially deleted in new
chr5	131954233	131994225	chr5:131954233-131994225	1	-	131954233	131994225	789624	21	138,72,102,144,117,89,73,96,135,135,78,74,52,33,179,45,100,102,65,115,195,	0,5302,6286,8301,12182,13706,15894,17316,18490,19032,20659,22414,31173,32588,33814,34322,34571,35173,35866,36619,39797,
#Deleted in new
chr5	131959572	131960945	chr5:131959572-131960945	0	-	131959572	131959572	8553170	2	35,426,	0,947,
#Partially deleted in new
chr5	131971571	131975130	chr5:131971571-131975130	0	-	131971571	131971571	8553170	4	74,135,135,238,	0,1152,1694,3321,
#Partially deleted in new
chr5	131972786	131994253	chr5:131972786-131994253	0	-	131972786	131994225	789624	12	72,135,78,74,52,33,179,100,102,65,115,118,	0,479,1971,3861,12620,14035,15261,16018,16620,17313,18066,21349,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	131981858	131988090	chr5:131981858-131988090	0	-	131981858	131981858	8553170	3	3600,33,43,	0,4963,6189,
#Partially deleted in new
chr5	131988164	132011903	chr5:131988164-132011903	0	-	131988164	131994225	789624	7	62,100,102,65,115,221,134,	0,640,1242,1935,2688,5866,23605,
#Partially deleted in new
chr5	131989425	131994701	chr5:131989425-131994701	0	-	131989425	131994225	789624	4	83,65,115,671,	0,674,1427,4605,
#Partially deleted in new
chr5	131989449	132001881	chr5:131989449-132001881	0	-	131989449	131994225	789624	5	59,65,115,221,70,	0,650,1403,4581,12362,
#Partially deleted in new
chr5	131989479	132012177	chr5:131989479-132012177	0	-	131989479	131994225	789624	5	29,65,115,221,89,	0,620,1373,4551,22609,
#Partially deleted in new
chr5	131989479	132012177	chr5:131989479-132012177	0	-	131989479	131994225	789624	5	29,65,115,116,89,	0,620,1373,4656,22609,
#Partially deleted in new
chr5	131993165	132012243	chr5:131993165-132012243	0	-	131993165	131993165	8553170	3	205,221,155,	0,865,18923,
#Partially deleted in new
chr5	131993754	132011817	chr5:131993754-132011817	0	-	131993754	131993754	8553170	2	497,48,	0,18015,
#Partially deleted in new
chr5	132003591	132007022	chr5:132003591-132007022	3	+	132003591	132003591	8553170	2	220,703,	0,2728,
#Deleted in new
chr5	132011447	132013199	chr5:132011447-132013199	3	+	132011447	132011447	8553170	3	98,232,129,	0,1241,1623,
#Partially deleted in new
chr5	132060528	132063204	chr5:132060528-132063204	3	+	132060706	132062791	0	5	340,42,90,42,536,	0,438,1783,1997,2140,
#Deleted in new
chr5	132073789	132076170	chr5:132073789-132076170	3	+	132073823	132075852	0	4	193,42,126,426,	0,291,1020,1955,
#Deleted in new
chr5	132080065	132080133	chr5:132080065-132080133	3	+	132080065	132080065	8553170	1	68,	0,
#Partially deleted in new
chr5	132147490	132149559	chr5:132147490-132149559	7	-	132147490	132147490	16724991	2	168,161,	0,1908,
#Deleted in new
chr5	132163602	132163765	chr5:132163602-132163765	7	-	132163602	132163602	16724991	1	163,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	132179233	132181128	chr5:132179233-132181128	3	-	132179233	132179233	8553170	2	214,167,	0,1728,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	132184875	132192808	chr5:132184875-132192808	3	+	132184875	132184875	789624	3	212,79,548,	0,2419,7385,
#Partially deleted in new
chr5	132191837	132227815	chr5:132191837-132227815	1	-	132193009	132218626	789624	16	1243,97,69,66,54,100,71,177,194,240,138,152,97,100,525,26,	0,3088,3574,6368,7041,11910,12244,15870,17300,18446,22078,25359,25914,26707,34859,35952,
#Partially deleted in new
chr5	132192609	132227857	chr5:132192609-132227857	1	-	132193009	132218626	789624	16	471,97,69,66,54,100,71,177,194,240,138,152,97,100,136,68,	0,2316,2802,5596,6269,11138,11472,15098,16528,17674,21306,24587,25142,25935,34476,35180,
#Partially deleted in new
chr5	132192609	132228082	chr5:132192609-132228082	1	-	132193009	132218626	789624	15	471,97,69,60,54,100,71,177,194,240,138,152,97,100,293,	0,2316,2802,5711,6269,11138,11472,15098,16528,17674,21306,24587,25142,25935,35180,
#Partially deleted in new
chr5	132192609	132227819	chr5:132192609-132227819	1	-	132193009	132218626	789624	16	471,97,69,60,54,100,71,177,194,240,138,152,97,100,173,30,	0,2316,2802,5711,6269,11138,11472,15098,16528,17674,21306,24587,25142,25935,34476,35180,
#Partially deleted in new
chr5	132192612	132227242	chr5:132192612-132227242	1	-	132193009	132218626	789624	15	468,97,69,60,54,100,71,177,194,240,138,152,97,100,546,	0,2313,2799,5708,6266,11135,11469,15095,16525,17671,21303,24584,25139,25932,34084,
#Partially deleted in new
chr5	132192612	132227242	chr5:132192612-132227242	1	-	132193009	132218626	789624	15	468,97,69,66,54,100,71,177,194,240,138,152,97,100,546,	0,2313,2799,5593,6266,11135,11469,15095,16525,17671,21303,24584,25139,25932,34084,
#Partially deleted in new
chr5	132192670	132195258	chr5:132192670-132195258	0	-	132192670	132192670	8553170	2	410,333,	0,2255,
#Deleted in new
chr5	132192985	132193568	chr5:132192985-132193568	0	-	132192985	132192985	8553170	2	286,177,	0,406,
#Partially deleted in new
chr5	132193040	132195730	chr5:132193040-132195730	0	-	132193040	132193040	8553170	3	40,97,319,	0,1885,2371,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	132199455	132203487	chr5:132199455-132203487	7	+	132199455	132199455	16724991	2	3415,141,	0,3891,
#Partially deleted in new
chr5	132210379	132227794	chr5:132210379-132227794	0	-	132210379	132218626	789624	7	144,138,152,97,100,136,256,	0,3536,6817,7372,8165,16706,17159,
#Partially deleted in new
chr5	132210380	132295271	chr5:132210380-132295271	0	-	132210380	132295255	789624	6	143,138,152,97,100,94,	0,3535,6816,7371,8164,84797,
#Partially deleted in new
chr5	132210489	132222091	chr5:132210489-132222091	0	-	132210489	132218626	789624	6	34,138,152,97,100,47,	0,3426,6707,7262,8055,11555,
#Partially deleted in new
chr5	132213923	132227839	chr5:132213923-132227839	0	-	132213923	132218626	789624	6	130,152,97,100,290,50,	0,3273,3828,4621,13008,13866,
#Partially deleted in new
chr5	132213944	132227378	chr5:132213944-132227378	0	-	132213944	132218626	789624	5	109,152,97,100,293,	0,3252,3807,4600,13141,
#Partially deleted in new
chr5	132214040	132227835	chr5:132214040-132227835	0	-	132214040	132218626	789624	6	13,152,97,124,136,46,	0,3156,3711,4504,13045,13749,
#Partially deleted in new
chr5	132217196	132227262	chr5:132217196-132227262	0	-	132217196	132217196	8553170	3	652,100,177,	0,1348,9889,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	132217222	132277600	chr5:132217222-132277600	2	-	132217222	132218626	789624	4	126,97,100,259,	0,529,1322,60119,
#Partially deleted in new
chr5	132217778	132228258	chr5:132217778-132228258	0	-	132217778	132218626	789624	4	70,100,136,121,	0,766,9307,10359,
#Deleted in new
chr5	132217848	132217918	chr5:132217848-132217918	3	-	132217848	132217848	5263520	1	70,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	132248906	132295315	chr5:132248906-132295315	0	-	132248906	132248906	8553170	4	2050,147,173,138,	0,28435,31875,46271,
#Deleted in new
chr5	132257670	132273454	chr5:132257670-132273454	3	+	132257734	132272229	0	7	157,152,82,179,164,118,1430,	0,4938,8793,13244,13632,14120,14354,
#Deleted in new
chr5	132257695	132266761	chr5:132257695-132266761	0	+	132257695	132257695	8553170	3	132,152,298,	0,4913,8768,
#Deleted in new
chr5	132257702	132271873	chr5:132257702-132271873	0	+	132257702	132257702	8553170	2	125,959,	0,13212,
#Deleted in new
chr5	132257706	132272332	chr5:132257706-132272332	1	+	132257734	132272095	0	6	121,152,82,179,164,308,	0,4902,8757,13208,13596,14318,
#Deleted in new
chr5	132261448	132271336	chr5:132261448-132271336	0	+	132262692	132271336	789624	5	91,152,82,179,34,	0,1160,5015,9466,9854,
#Deleted in new
chr5	132270431	132271833	chr5:132270431-132271833	0	+	132270431	132270431	8553170	4	70,179,164,43,	0,483,871,1359,
#Deleted in new
chr5	132270971	132272063	chr5:132270971-132272063	0	+	132270971	132270971	8553170	3	122,606,39,	0,331,1053,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	132277208	132277922	chr5:132277208-132277922	0	-	132277208	132277208	8553170	2	280,216,	0,498,
#Partially deleted in new
chr5	132294442	132344206	chr5:132294442-132344206	3	+	132294616	132343835	789624	10	567,104,155,172,127,95,215,183,136,447,	0,17718,19171,27741,32834,37313,40275,41375,46122,49317,
#Partially deleted in new
chr5	132295424	132320972	chr5:132295424-132320972	0	+	132295424	132295424	8553170	4	197,104,155,108,	0,16736,18189,25440,
#Partially deleted in new
chr5	132322183	132327385	chr5:132322183-132327385	0	+	132322183	132322183	8553170	3	172,182,109,	0,2277,5093,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	132349432	132352550	chr5:132349432-132352550	0	-	132349432	132349432	8553170	2	525,62,	0,3056,
#Duplicated in new
chr5	132349814	132369659	chr5:132349814-132369659	1	-	132349814	132349814	8553170	5	97,93,191,214,243,	0,15120,16044,16753,19602,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	132365489	132365599	chr5:132365489-132365599	3	-	132365489	132365489	5263520	1	110,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	132366280	132369648	chr5:132366280-132369648	1	-	132366280	132366280	8553170	2	501,232,	0,3136,
#Partially deleted in new
chr5	132369751	132395614	chr5:132369751-132395614	3	+	132369972	132394272	789624	10	614,104,155,172,127,101,215,183,136,1430,	0,8626,14395,15576,17273,19169,20938,22681,23924,24433,
#Partially deleted in new
chr5	132369899	132389005	chr5:132369899-132389005	0	+	132369972	132385360	789624	4	466,172,127,85,	0,15428,17125,19021,
#Partially deleted in new
chr5	132369972	132394272	chr5:132369972-132394272	1	+	132369972	132394272	789624	11	393,72,104,155,172,127,101,215,183,136,88,	0,8191,8405,14174,15355,17052,18948,20717,22460,23703,24212,
#Partially deleted in new
chr5	132370275	132387151	chr5:132370275-132387151	0	+	132370275	132387151	789624	6	90,72,104,155,172,127,	0,7888,8102,13871,15052,16749,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	132376085	132395611	chr5:132376085-132395611	0	+	132376085	132376085	8553170	9	2150,5924,172,127,101,215,183,136,1427,	0,2292,9242,10939,12835,14604,16347,17590,18099,
#Partially deleted in new
chr5	132385327	132393815	chr5:132385327-132393815	0	+	132385327	132390785	789624	6	172,127,101,129,183,140,	0,1697,3593,5448,7105,8348,
#Deleted in new
chr5	132387812	132393683	chr5:132387812-132393683	0	+	132387812	132387812	8553170	5	54,101,215,183,8,	0,1108,2877,4620,5863,
#Deleted in new
chr5	132388910	132394752	chr5:132388910-132394752	0	+	132388910	132392433	789624	4	111,183,136,568,	0,3522,4765,5274,
#Deleted in new
chr5	132388959	132395613	chr5:132388959-132395613	0	+	132388959	132388959	8553170	4	1945,183,136,1429,	0,3473,4716,5225,
#Partially deleted in new
chr5	132410635	132476044	chr5:132410635-132476044	0	+	132410635	132410635	5263520	4	406,118,40,378,	0,9187,39014,65031,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr5	132410831	132646079	chr5:132410831-132646079	3	+	132575860	132642364	789624	27	210,118,40,84,152,186,205,129,166,194,207,183,158,176,238,190,127,194,111,93,114,128,225,86,143,134,3902,	0,8991,38818,148452,164945,168485,169030,176730,177092,177855,178799,180392,181045,184037,184741,192468,193088,193974,197783,198285,198451,205171,207238,226283,227249,229840,231346,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr5	132410910	132646079	chr5:132410910-132646079	1	+	132575860	132642364	789624	28	131,118,40,142,84,152,186,205,129,166,194,207,183,158,176,238,190,127,194,111,93,114,128,225,86,143,134,3902,	0,8912,38739,145421,148373,164866,168406,168951,176651,177013,177776,178720,180313,180966,183958,184662,192389,193009,193895,197704,198206,198372,205092,207159,226204,227170,229761,231267,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr5	132410910	132646079	chr5:132410910-132646079	0	+	132410910	132410910	8553170	26	131,118,40,84,152,750,129,166,194,207,183,158,176,238,190,127,194,111,93,114,128,225,86,143,134,3902,	0,8912,38739,148373,164866,168406,176651,177013,177776,178720,180313,180966,183958,184662,192389,193009,193895,197704,198206,198372,205092,207159,226204,227170,229761,231267,
#Partially deleted in new
chr5	132410919	132488702	chr5:132410919-132488702	1	+	132410919	132410919	8553170	4	122,118,40,2511,	0,8903,38730,75272,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr5	132410953	132646079	chr5:132410953-132646079	0	+	132410953	132410953	8553170	24	88,118,84,152,129,166,194,207,183,158,98,238,190,127,194,111,93,114,128,225,86,143,134,3902,	0,8869,148330,164823,176608,176970,177733,178677,180270,180923,184150,184619,192346,192966,193852,197661,198163,198329,205049,207116,226161,227127,229718,231224,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	132410980	132465109	chr5:132410980-132465109	1	+	132410980	132410980	8553170	4	61,118,40,4548,	0,8842,38669,49581,
#Partially deleted in new
chr5	132410980	132449991	chr5:132410980-132449991	0	+	132410980	132410980	8553170	3	61,118,342,	0,8842,38669,
#Partially deleted in new
chr5	132410988	132457421	chr5:132410988-132457421	0	+	132410988	132410988	8553170	4	53,118,40,410,	0,8834,38661,46023,
#Partially deleted in new
chr5	132410988	132476010	chr5:132410988-132476010	3	+	132410988	132410988	8553170	5	53,118,40,1015,344,	0,8834,38661,59051,64678,
#Partially deleted in new
chr5	132419415	132426714	chr5:132419415-132426714	3	-	132419415	132419415	8553170	2	334,433,	0,6866,
#Partially deleted in new
chr5	132419863	132460930	chr5:132419863-132460930	0	+	132419863	132419863	8553170	3	77,40,369,	0,29786,40698,
#Deleted in new
chr5	132425380	132426454	chr5:132425380-132426454	0	-	132425380	132425380	8553170	2	232,173,	0,901,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr5	132449651	132646079	chr5:132449651-132646079	1	+	132575860	132642364	789624	26	38,469,84,152,186,205,129,166,194,207,183,158,176,238,190,127,194,111,93,114,128,225,86,143,134,3902,	0,36540,109632,126125,129665,130210,137910,138272,139035,139979,141572,142225,145217,145921,153648,154268,155154,158963,159465,159631,166351,168418,187463,188429,191020,192526,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	132468146	132468257	chr5:132468146-132468257	3	+	132468146	132468146	8553170	1	111,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	132468889	132473043	chr5:132468889-132473043	3	-	132468889	132468889	8553170	2	3289,441,	0,3713,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	132481608	132490798	chr5:132481608-132490798	3	-	132483950	132489478	789624	10	2467,136,50,123,130,50,177,100,92,254,	0,2753,4058,4642,4948,5186,5345,6317,7783,8936,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	132483084	132489032	chr5:132483084-132489032	0	-	132483084	132483084	8553170	2	4046,1107,	0,4841,
#Partially deleted in new
chr5	132483085	132490262	chr5:132483085-132490262	1	-	132483950	132489478	789624	10	990,136,50,123,130,50,177,100,92,213,	0,1276,2581,3165,3471,3709,3868,4840,6306,6964,
#Partially deleted in new
chr5	132484050	132490655	chr5:132484050-132490655	1	-	132484435	132489478	789624	8	25,136,130,50,177,100,92,111,	0,311,2506,2744,2903,3875,5341,6494,
#Deleted in new
chr5	132485666	132490777	chr5:132485666-132490777	0	-	132485666	132489478	789624	7	50,130,50,177,100,92,233,	0,890,1128,1287,2259,3725,4878,
#Deleted in new
chr5	132486122	132490765	chr5:132486122-132490765	0	-	132486122	132486122	8553170	6	564,50,177,127,92,221,	0,672,831,1803,3269,4422,
#Deleted in new
chr5	132486340	132490304	chr5:132486340-132490304	0	-	132486340	132489478	789624	7	33,130,50,177,100,92,303,	0,216,454,613,1585,3051,3661,
#Deleted in new
chr5	132486616	132490767	chr5:132486616-132490767	0	-	132486616	132486616	8553170	4	70,50,177,223,	0,178,337,3928,
#Deleted in new
chr5	132486663	132490726	chr5:132486663-132490726	0	-	132487061	132489478	789624	5	23,50,177,92,182,	0,131,290,2728,3881,
#Deleted in new
chr5	132486961	132489645	chr5:132486961-132489645	0	-	132486961	132489478	789624	3	169,100,254,	0,964,2430,
#Deleted in new
chr5	132488670	132490754	chr5:132488670-132490754	0	-	132488670	132488670	8553170	2	813,210,	0,1874,
#Deleted in new
chr5	132541443	132543522	chr5:132541443-132543522	3	-	132541810	132543478	0	4	466,129,33,188,	0,571,1650,1891,
#Partially deleted in new
chr5	132542065	132556838	chr5:132542065-132556838	0	-	132542065	132556715	789624	3	78,33,165,	0,1028,14608,
#Deleted in new
chr5	132542065	132543920	chr5:132542065-132543920	0	-	132542065	132542065	8553170	2	78,827,	0,1028,
#Partially deleted in new
chr5	132556018	132579907	chr5:132556018-132579907	0	+	132575860	132579907	789624	5	455,84,152,186,46,	0,3265,19758,23298,23843,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr5	132556937	132646344	chr5:132556937-132646344	3	+	132557324	132642364	789624	25	516,84,152,186,205,129,166,194,207,183,158,176,238,190,127,194,111,93,114,128,225,86,143,134,4167,	0,2346,18839,22379,22924,30624,30986,31749,32693,34286,34939,37931,38635,46362,46982,47868,51677,52179,52345,59065,61132,80177,81143,83734,85240,
#Partially deleted in new
chr5	132556937	132642476	chr5:132556937-132642476	0	+	132557324	132579325	789624	25	516,84,87,186,205,129,166,194,207,183,158,176,238,190,127,194,111,93,114,128,225,86,143,134,299,	0,2346,18839,22379,22924,30624,30986,31749,32693,34286,34939,37931,38635,46362,46982,47868,51677,52179,52345,59065,61132,80177,81143,83734,85240,
#Partially deleted in new
chr5	132557230	132609339	chr5:132557230-132609339	0	+	132557324	132594889	789624	18	223,84,152,186,205,129,166,194,207,183,176,238,190,127,194,111,93,57,	0,2053,18546,22086,22631,30331,30693,31456,32400,33993,37638,38342,46069,46689,47575,51384,51886,52052,
#Partially deleted in new
chr5	132557230	132595768	chr5:132557230-132595768	0	+	132557324	132595768	789624	12	223,84,152,186,205,129,166,194,207,158,176,196,	0,2053,18546,22086,22631,30331,30693,31456,32400,34646,37638,38342,
#Partially deleted in new
chr5	132579744	132588807	chr5:132579744-132588807	0	+	132579744	132579744	8553170	4	322,129,166,121,	0,7817,8179,8942,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	132591276	132593527	chr5:132591276-132593527	0	+	132591276	132592950	789624	3	130,158,764,	0,600,1487,
#Partially deleted in new
chr5	132595221	132603405	chr5:132595221-132603405	0	+	132595221	132595221	8553170	4	52,238,77,106,	0,351,4840,8078,
#Partially deleted in new
chr5	132618270	132643181	chr5:132618270-132643181	0	+	132618270	132643089	789624	5	24,86,143,134,177,	0,18844,19810,22401,24734,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	132630588	132641773	chr5:132630588-132641773	1	-	132630588	132630588	789624	3	303,108,28,	0,7569,11157,
#Partially deleted in new
chr5	132638047	132656154	chr5:132638047-132656154	0	-	132638047	132638047	789624	3	218,85,104,	0,4150,18003,
#Partially deleted in new
chr5	132638049	132655892	chr5:132638049-132655892	0	-	132638049	132638049	789624	2	216,174,	0,17669,
#Partially deleted in new
chr5	132638075	132664272	chr5:132638075-132664272	3	-	132638075	132638075	8553170	4	190,88,100,94,	0,3670,4107,26103,
#Deleted in new
chr5	132656262	132660550	chr5:132656262-132660550	0	+	132656262	132656262	8553170	5	368,179,54,105,376,	0,803,3155,3461,3912,
#Deleted in new
chr5	132656523	132660614	chr5:132656523-132660614	0	+	132656523	132656523	8553170	5	107,71,54,105,440,	0,1766,2894,3200,3651,
#Deleted in new
chr5	132656535	132660703	chr5:132656535-132660703	0	+	132656535	132656535	8553170	6	95,179,71,54,105,529,	0,530,1754,2882,3188,3639,
#Deleted in new
chr5	132658172	132661110	chr5:132658172-132661110	3	+	132658186	132660282	789624	4	188,54,105,936,	0,1245,1551,2002,
#Deleted in new
chr5	132658172	132660332	chr5:132658172-132660332	0	+	132658172	132658172	8553170	3	1299,105,158,	0,1551,2002,
#Deleted in new
chr5	132658172	132660328	chr5:132658172-132660328	1	+	132658228	132660321	789624	5	188,54,105,105,46,	0,1245,1551,2002,2110,
#Partially deleted in new
chr5	132673985	132682676	chr5:132673985-132682676	3	+	132674050	132682587	0	4	200,48,177,191,	0,473,5728,8500,
#Partially deleted in new
chr5	132673985	132682676	chr5:132673985-132682676	1	+	132674050	132679840	789624	5	200,48,101,177,191,	0,473,3795,5728,8500,
#Partially deleted in new
chr5	132674050	132682587	chr5:132674050-132682587	1	+	132674050	132682587	0	3	135,177,102,	0,5663,8435,
#Partially deleted in new
chr5	132674357	132679869	chr5:132674357-132679869	0	+	132674357	132674357	8553170	2	149,156,	0,5356,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	132688680	132721583	chr5:132688680-132721583	3	+	132688680	132688680	8553170	3	20,253,229,	0,901,32674,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	132689723	132697956	chr5:132689723-132697956	0	+	132689723	132689723	8553170	2	111,438,	0,7795,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	132689723	132723725	chr5:132689723-132723725	0	+	132689723	132689723	8553170	2	111,665,	0,33337,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	132689723	132697956	chr5:132689723-132697956	0	+	132689723	132689723	8553170	3	111,184,438,	0,2727,7795,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr5	132692627	132737638	chr5:132692627-132737638	3	-	132696633	132737419	789624	17	4055,125,69,54,126,111,181,157,99,175,198,140,106,85,145,274,225,	0,6543,7588,8019,9459,9930,10257,10835,18331,23129,23617,24217,27981,33500,33726,41577,44786,
#Partially deleted in new
chr5	132695629	132737572	chr5:132695629-132737572	1	-	132696633	132737419	789624	18	1053,125,69,54,126,111,181,157,9,99,175,198,140,106,85,145,274,159,	0,3541,4586,5017,6457,6928,7255,7833,10821,15329,20127,20615,21215,24979,30498,30724,38575,41784,
#Partially deleted in new
chr5	132695631	132737572	chr5:132695631-132737572	1	-	132696633	132737419	789624	19	1051,125,69,54,126,111,181,157,9,68,100,175,198,140,106,85,145,274,159,	0,3539,4584,5015,6455,6926,7253,7831,10819,13275,15323,20125,20613,21213,24977,30496,30722,38573,41782,
#Partially deleted in new
chr5	132696453	132703034	chr5:132696453-132703034	0	-	132696633	132703034	789624	6	229,125,69,54,111,150,	0,2717,3762,4193,6104,6431,
#Partially deleted in new
chr5	132696547	132699480	chr5:132696547-132699480	0	-	132696547	132696547	8553170	2	135,310,	0,2623,
#Partially deleted in new
chr5	132696633	132737419	chr5:132696633-132737419	1	-	132696633	132737419	789624	19	49,125,69,54,126,111,181,157,9,72,99,175,198,140,106,85,145,274,6,	0,2537,3582,4013,5453,5924,6251,6829,9817,12273,14325,19123,19611,20211,23975,29494,29720,37571,40780,
#Partially deleted in new
chr5	132700535	132703610	chr5:132700535-132703610	0	-	132700535	132700535	8553170	5	165,126,111,181,148,	0,1551,2022,2349,2927,
#Partially deleted in new
chr5	132726127	132736928	chr5:132726127-132736928	0	-	132726127	132736777	789624	4	85,145,274,154,	0,226,8077,10647,
#Partially deleted in new
chr5	132747444	132754164	chr5:132747444-132754164	3	+	132747495	132752970	789624	6	480,129,75,141,231,1299,	0,902,1903,3412,4521,5421,
#Partially deleted in new
chr5	132747444	132754403	chr5:132747444-132754403	1	+	132747495	132752970	789624	6	480,129,75,141,279,1538,	0,902,1903,3412,4473,5421,
#Deleted in new
chr5	132749369	132751293	chr5:132749369-132751293	0	+	132749369	132749369	8553170	2	53,437,	0,1487,
#Partially deleted in new
chr5	132750816	132777375	chr5:132750816-132777375	3	-	132752015	132777137	789624	10	1365,191,133,169,97,162,187,196,121,268,	0,9985,10316,10641,10983,11667,12889,13407,14592,26291,
#Deleted in new
chr5	132750939	132752011	chr5:132750939-132752011	0	+	132750939	132750939	8553170	2	58,318,	0,754,
#Partially deleted in new
chr5	132751458	132760871	chr5:132751458-132760871	0	-	132751458	132751458	8553170	2	720,70,	0,9343,
#Partially deleted in new
chr5	132754178	132777238	chr5:132754178-132777238	1	-	132754417	132777137	789624	10	342,191,133,169,97,162,181,196,121,131,	0,6623,6954,7279,7621,8305,9527,10045,11230,22929,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	132756000	132777421	chr5:132756000-132777421	1	-	132758820	132777137	789624	10	2824,191,133,169,97,162,187,196,121,314,	0,4801,5132,5457,5799,6483,7705,8223,9408,21107,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	132756004	132777869	chr5:132756004-132777869	1	-	132758820	132764390	789624	10	2820,191,133,169,97,162,187,196,121,194,	0,4797,5128,5453,5795,6479,7701,8219,9404,21671,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	132756004	132777375	chr5:132756004-132777375	1	-	132758820	132777137	789624	11	2820,191,133,169,97,162,187,26,161,121,268,	0,4797,5128,5453,5795,6479,7701,8034,8254,9404,21103,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	132756332	132777344	chr5:132756332-132777344	1	-	132759000	132777137	789624	10	2675,191,133,169,97,162,187,196,121,237,	0,4469,4800,5125,5467,6151,7373,7891,9076,20775,
#Partially deleted in new
chr5	132758142	132778216	chr5:132758142-132778216	1	-	132758820	132764390	789624	11	682,191,133,169,97,162,187,196,121,219,132,	0,2659,2990,3315,3657,4341,5563,6081,7266,19533,19942,
#Partially deleted in new
chr5	132758143	132777261	chr5:132758143-132777261	1	-	132758513	132777137	789624	10	413,191,133,169,97,162,181,196,121,154,	0,2658,2989,3314,3656,4340,5562,6080,7265,18964,
#Partially deleted in new
chr5	132758199	132777220	chr5:132758199-132777220	1	-	132758513	132777137	789624	10	357,191,133,169,97,162,187,196,121,113,	0,2602,2933,3258,3600,4284,5506,6024,7209,18908,
#Deleted in new
chr5	132761500	132765474	chr5:132761500-132765474	0	-	132761500	132761500	8553170	5	126,162,187,196,66,	0,983,2205,2723,3908,
#Partially deleted in new
chr5	132762602	132775966	chr5:132762602-132775966	0	-	132762602	132764390	789624	5	43,181,196,121,232,	0,1103,1621,2806,13132,
#Partially deleted in new
chr5	132763768	132778009	chr5:132763768-132778009	0	-	132763768	132764390	789624	4	124,196,121,252,	0,455,1640,13989,
#Partially deleted in new
chr5	132763823	132807241	chr5:132763823-132807241	0	-	132763823	132764390	789624	4	69,196,121,176,	0,400,1585,43242,
#Partially deleted in new
chr5	132763960	132777221	chr5:132763960-132777221	0	-	132763960	132763960	8553170	3	459,121,114,	0,1448,13147,
#Partially deleted in new
chr5	132764390	132777248	chr5:132764390-132777248	0	-	132764390	132764390	8553170	4	29,121,290,141,	0,1018,9532,12717,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	132813586	132816797	chr5:132813586-132816797	3	+	132813621	132815271	789624	1	3211,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	132817247	132818000	chr5:132817247-132818000	3	-	132817247	132817247	8553170	1	753,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	132822140	132830898	chr5:132822140-132830898	1	-	132822795	132826140	789624	10	988,273,142,570,207,56,1020,311,147,305,	0,1109,1482,1709,2474,2877,3022,4136,5320,8453,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	132822160	132826678	chr5:132822160-132826678	1	-	132822795	132826140	789624	8	968,273,142,570,207,56,1020,402,	0,1089,1462,1689,2454,2857,3002,4116,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	132822319	132826310	chr5:132822319-132826310	3	-	132822795	132826140	789624	7	794,273,142,570,207,56,1148,	0,930,1303,1530,2295,2698,2843,
#Deleted in new
chr5	132822795	132826140	chr5:132822795-132826140	1	-	132822795	132826140	789624	6	333,273,142,570,56,978,	0,454,827,1054,2222,2367,
#Deleted in new
chr5	132823282	132823805	chr5:132823282-132823805	0	-	132823282	132823282	8553170	2	240,183,	0,340,
#Deleted in new
chr5	132824038	132824419	chr5:132824038-132824419	0	-	132824038	132824038	8553170	2	142,139,	0,242,
#Deleted in new
chr5	132824931	132825282	chr5:132824931-132825282	0	-	132824931	132824931	8553170	1	351,	0,
#Partially deleted in new
chr5	132825168	132830659	chr5:132825168-132830659	0	-	132825168	132826140	789624	2	1014,66,	0,5425,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	132848576	132848696	chr5:132848576-132848696	7	+	132848576	132848576	16724991	1	120,	0,
#Partially deleted in new
chr5	132861180	132866637	chr5:132861180-132866637	3	-	132861588	132864533	789624	3	1376,1225,39,	0,2956,5418,
#Partially deleted in new
chr5	132861183	132866330	chr5:132861183-132866330	1	-	132861588	132864269	789624	4	1373,244,36,143,	0,2953,4253,5004,
#Partially deleted in new
chr5	132861183	132866884	chr5:132861183-132866884	1	-	132861588	132864269	789624	4	1373,244,36,286,	0,2953,4253,5415,
#Partially deleted in new
chr5	132861183	132866884	chr5:132861183-132866884	1	-	132861588	132864269	789624	3	1373,164,286,	0,2953,5415,
#Partially deleted in new
chr5	132861183	132866579	chr5:132861183-132866579	1	-	132861588	132864269	789624	4	1373,177,183,66,	0,2953,4253,5330,
#Partially deleted in new
chr5	132862383	132866546	chr5:132862383-132866546	0	-	132862383	132862383	8553170	4	173,177,183,33,	0,1753,3053,4130,
#Partially deleted in new
chr5	132862465	132866884	chr5:132862465-132866884	0	-	132862465	132862465	8553170	3	91,164,286,	0,1671,4133,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	132866559	132868031	chr5:132866559-132868031	3	+	132866881	132867582	0	3	128,167,544,	0,309,928,
#Deleted in new
chr5	132866629	132867687	chr5:132866629-132867687	1	+	132866881	132867582	0	3	62,167,200,	0,239,858,
#Deleted in new
chr5	132866632	132867687	chr5:132866632-132867687	0	+	132866632	132866632	8553170	2	55,819,	0,236,
#Deleted in new
chr5	132866641	132867699	chr5:132866641-132867699	0	+	132866641	132866641	8553170	2	46,212,	0,846,
#Deleted in new
chr5	132866645	132867683	chr5:132866645-132867683	1	+	132866881	132867582	0	2	390,196,	0,842,
#Deleted in new
chr5	132866656	132867342	chr5:132866656-132867342	0	+	132866656	132866656	8553170	2	35,474,	0,212,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	132872321	132875046	chr5:132872321-132875046	3	+	132873694	132874446	0	3	1430,140,637,	0,1628,2088,
#Partially deleted in new
chr5	132873443	132874698	chr5:132873443-132874698	0	+	132873443	132873443	8553170	2	646,289,	0,966,
#Partially deleted in new
chr5	132873665	132874695	chr5:132873665-132874695	0	+	132873665	132873665	8553170	3	86,140,231,	0,284,799,
#Partially deleted in new
chr5	132875378	132963634	chr5:132875378-132963634	3	-	132881058	132937189	0	21	5808,221,44,94,72,137,64,95,241,89,918,163,38,55,46,37,87,45,795,127,376,	0,7961,9697,10931,12142,12467,12718,13700,16785,17651,20944,22851,23725,24208,27063,28989,51742,56799,58768,61688,87880,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	132891816	132963618	chr5:132891816-132963618	1	-	132892097	132937189	0	13	588,89,918,163,38,55,46,37,87,45,795,127,360,	0,1213,4506,6413,7287,7770,10625,12551,35304,40361,42330,45250,71442,
#Partially deleted in new
chr5	132896810	132901082	chr5:132896810-132901082	0	-	132896810	132896810	8553170	5	430,163,38,55,211,	0,1419,2293,2776,4061,
#Partially deleted in new
chr5	132897203	132934231	chr5:132897203-132934231	0	-	132897203	132897203	8553170	8	37,38,55,46,37,87,45,85,	0,1900,2383,5238,7164,29917,34974,36943,
#Partially deleted in new
chr5	132897203	132934238	chr5:132897203-132934238	0	-	132897203	132934238	789624	8	37,163,38,55,46,37,45,92,	0,1026,1900,2383,5238,7164,34974,36943,
#Partially deleted in new
chr5	132898282	132927562	chr5:132898282-132927562	0	-	132898282	132898282	8553170	6	110,38,55,46,37,442,	0,821,1304,4159,6085,28838,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	132903860	132963514	chr5:132903860-132963514	0	-	132903860	132903860	8553170	7	320,37,87,45,795,127,256,	0,507,23260,28317,30286,33206,59398,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	132926700	132963513	chr5:132926700-132963513	0	-	132926700	132926700	8553170	5	507,45,795,127,255,	0,5477,7446,10366,36558,
#Partially deleted in new
chr5	132934619	132937740	chr5:132934619-132937740	0	-	132934619	132937189	789624	3	322,127,92,	0,2447,3029,
#Partially deleted in new
chr5	132942931	132945050	chr5:132942931-132945050	7	+	132942931	132942931	16724991	2	1136,69,	0,2050,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	132945341	132945454	chr5:132945341-132945454	3	+	132945341	132945341	8553170	1	113,	0,
#Deleted in new
chr5	132948492	132948718	chr5:132948492-132948718	7	+	132948492	132948492	16724991	1	226,	0,
#Partially deleted in new
chr5	132963769	132964164	chr5:132963769-132964164	3	+	132963769	132963769	8553170	1	395,	0,
#Partially deleted in new
chr5	132987651	132988110	chr5:132987651-132988110	7	-	132987651	132987651	16724991	1	459,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	132993098	132993200	chr5:132993098-132993200	3	-	132993098	132993098	8553170	1	102,	0,
#Partially deleted in new
chr5	132996984	133026604	chr5:132996984-133026604	3	-	132998582	133026537	789624	4	1866,42,162,108,	0,3147,9774,29512,
#Partially deleted in new
chr5	132996995	133026549	chr5:132996995-133026549	1	-	132998582	133026537	789624	5	1837,42,162,66,53,	0,3136,9763,25845,29501,
#Partially deleted in new
chr5	132998099	133026545	chr5:132998099-133026545	1	-	132998582	133026537	789624	5	751,42,162,66,49,	0,2032,8659,24741,28397,
#Partially deleted in new
chr5	132998211	133026571	chr5:132998211-133026571	1	-	132998582	133026537	789624	3	639,162,75,	0,8547,28285,
#Partially deleted in new
chr5	132998407	133026549	chr5:132998407-133026549	1	-	132998844	133026537	789624	5	443,70,162,66,53,	0,1724,8351,24433,28089,
#Partially deleted in new
chr5	132998412	133026534	chr5:132998412-133026534	0	-	132998412	132998412	8553170	4	438,70,162,42,	0,1719,8346,28080,
#Partially deleted in new
chr5	132998527	133026549	chr5:132998527-133026549	1	-	132998844	133026537	789624	4	323,70,162,53,	0,1604,8231,27969,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	132998616	133026549	chr5:132998616-133026549	0	-	132998616	132998616	8553170	5	234,42,162,117,53,	0,1515,8142,12722,27880,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	132998704	133026545	chr5:132998704-133026545	0	-	132998704	132998704	789624	5	146,70,162,117,53,	0,1427,8054,12634,27788,
#Deleted in new
chr5	133003118	133003365	chr5:133003118-133003365	7	+	133003118	133003118	16724991	1	247,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	133019037	133026589	chr5:133019037-133026589	1	-	133019091	133026537	789624	3	166,66,93,	0,3803,7459,
#Partially deleted in new
chr5	133051961	133106449	chr5:133051961-133106449	3	+	133052250	133104436	789624	19	396,58,141,123,100,134,245,77,152,107,134,182,90,153,126,108,120,162,2217,	0,13018,15455,18412,21268,22031,24692,34820,36442,37093,37600,39231,40738,44136,45199,47583,49797,51903,52271,
#Partially deleted in new
chr5	133052127	133103949	chr5:133052127-133103949	1	+	133052250	133101828	789624	21	230,58,141,123,100,134,245,77,152,107,134,182,90,48,54,45,126,108,51,68,85,	0,12852,15289,18246,21102,21865,24526,34654,36276,36927,37434,39065,40572,43970,44023,44078,45033,47417,49631,49683,51737,
#Partially deleted in new
chr5	133052240	133103908	chr5:133052240-133103908	1	+	133052250	133091249	789624	19	117,58,141,123,100,134,245,77,152,107,101,50,158,90,153,126,108,120,44,	0,12739,15176,18133,20989,21752,24413,34541,36163,36814,37321,38925,38976,40459,43857,44920,47304,49518,51624,
#Deleted in new
chr5	133052768	133052971	chr5:133052768-133052971	3	+	133052768	133052768	8553170	1	203,	0,
#Partially deleted in new
chr5	133076042	133088495	chr5:133076042-133088495	0	+	133076042	133076042	8553170	4	138,245,77,92,	0,611,10739,12361,
#Partially deleted in new
chr5	133101595	133104477	chr5:133101595-133104477	0	+	133101595	133101595	8553170	3	283,162,245,	0,2269,2637,
#Partially deleted in new
chr5	133111054	133114475	chr5:133111054-133114475	3	-	133111054	133111054	8553170	2	461,217,	0,3204,
#Deleted in new
chr5	133172217	133173053	chr5:133172217-133173053	7	-	133172217	133172217	16724991	1	836,	0,
#Partially deleted in new
chr5	133196454	133612564	chr5:133196454-133612564	3	-	133199094	133603983	789624	16	3343,110,108,150,119,27,135,162,121,167,124,194,249,34,136,240,	0,5478,13736,20774,24293,27735,28695,29203,36962,52955,116199,120004,204283,370731,407403,415870,
#Partially deleted in new
chr5	133198467	133225925	chr5:133198467-133225925	0	-	133198467	133198467	8553170	8	1330,110,108,150,246,27,135,268,	0,3465,11723,18761,22280,25722,26682,27190,
#Partially deleted in new
chr5	133198467	133603994	chr5:133198467-133603994	1	-	133199094	133603983	789624	13	1330,110,108,150,119,27,135,162,121,156,71,34,137,	0,3465,11723,18761,22280,25722,26682,27190,34949,50942,202448,368718,405390,
#Partially deleted in new
chr5	133199732	133209895	chr5:133199732-133209895	0	-	133199732	133199732	8553170	4	65,110,292,104,	0,2200,2717,10059,
#Partially deleted in new
chr5	133209992	133224413	chr5:133209992-133224413	1	+	133209992	133209992	8553170	3	99,141,330,	0,856,14091,
#Partially deleted in new
chr5	133220772	133252264	chr5:133220772-133252264	0	-	133220772	133220772	8553170	6	94,135,162,121,167,138,	0,4377,4885,12644,28637,31354,
#Partially deleted in new
chr5	133243763	133246931	chr5:133243763-133246931	0	+	133243763	133243763	8553170	2	137,399,	0,2769,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	133243950	133248781	chr5:133243950-133248781	3	+	133243950	133243950	8553170	2	893,2249,	0,2582,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	133256491	133275977	chr5:133256491-133275977	0	+	133256491	133256491	8553170	2	27,237,	0,19249,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	133266584	133275977	chr5:133266584-133275977	3	+	133266584	133266584	8553170	3	34,118,237,	0,3472,9156,
#Partially deleted in new
chr5	133312416	133334058	chr5:133312416-133334058	0	-	133312416	133312416	8553170	4	122,124,194,48,	0,237,4042,21594,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	133316596	133583641	chr5:133316596-133583641	0	-	133316596	133583396	789624	4	56,249,34,377,	0,84141,250589,266668,
#Deleted in new
chr5	133387772	133388549	chr5:133387772-133388549	3	+	133387772	133387772	8553170	2	198,77,	0,700,
#Deleted in new
chr5	133427595	133427706	chr5:133427595-133427706	3	-	133427595	133427595	5263520	1	111,	0,
#Deleted in new
chr5	133457804	133458331	chr5:133457804-133458331	3	+	133457804	133457804	8553170	1	527,	0,
#Deleted in new
chr5	133574828	133575298	chr5:133574828-133575298	3	-	133574828	133574828	8553170	1	470,	0,
#Deleted in new
chr5	133720494	133720934	chr5:133720494-133720934	7	-	133720494	133720494	16724991	1	440,	0,
#Partially deleted in new
chr5	133913676	133917269	chr5:133913676-133917269	3	+	133913676	133913676	789624	3	320,148,215,	0,1098,3378,
#Partially deleted in new
chr5	133955501	133968787	chr5:133955501-133968787	3	-	133956858	133968584	789624	3	1489,527,342,	0,3992,12944,
#Partially deleted in new
chr5	133959534	133968674	chr5:133959534-133968674	0	-	133959534	133959534	8553170	2	486,149,	0,8991,
#Partially deleted in new
chr5	133959777	133968625	chr5:133959777-133968625	0	-	133959777	133959777	8553170	3	243,64,180,	0,7618,8668,
#Partially deleted in new
chr5	133971914	134005133	chr5:133971914-134005133	3	-	133972770	133993012	0	9	948,58,151,228,53,153,50,73,239,	0,1876,3956,8814,18940,19087,20391,21031,32980,
#Partially deleted in new
chr5	133971914	134004742	chr5:133971914-134004742	1	-	133972770	133993012	0	9	948,58,151,228,53,153,50,70,96,	0,1876,3956,8814,18940,19087,20391,21031,32732,
#Partially deleted in new
chr5	133971951	134004842	chr5:133971951-134004842	1	-	133972770	133993012	0	9	911,58,151,228,53,153,50,73,196,	0,1839,3919,8777,18903,19050,20354,20994,32695,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	133972725	133976369	chr5:133972725-133976369	0	-	133972725	133972725	8553170	3	137,58,499,	0,1065,3145,
#Partially deleted in new
chr5	133972725	133981017	chr5:133972725-133981017	0	-	133972725	133972725	8553170	4	137,58,151,289,	0,1065,3145,8003,
#Partially deleted in new
chr5	133980728	134004635	chr5:133980728-134004635	0	-	133980728	133993012	789624	6	228,53,153,50,70,149,	0,10126,10273,11577,12217,23758,
#Partially deleted in new
chr5	133988787	134004692	chr5:133988787-134004692	0	-	133988787	133988787	8553170	6	456,53,153,50,73,46,	0,2067,2214,3518,4158,15859,
#Deleted in new
chr5	134005146	134005562	chr5:134005146-134005562	3	+	134005146	134005146	8553170	1	416,	0,
#Partially deleted in new
chr5	134081913	134082040	chr5:134081913-134082040	7	-	134081913	134081913	16724991	1	127,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	134114710	134147997	chr5:134114710-134147997	3	+	134114906	134146303	789624	10	445,67,125,106,88,120,163,108,49,1774,	0,610,1198,23348,24240,27474,28010,28282,28881,31513,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	134114711	134148210	chr5:134114711-134148210	1	+	134114906	134146521	789624	11	444,67,125,106,88,120,163,108,49,73,1987,	0,609,1197,23347,24239,27473,28009,28281,28880,30085,31512,
#Partially deleted in new
chr5	134115200	134142262	chr5:134115200-134142262	0	+	134115937	134142262	789624	5	187,125,106,88,78,	0,708,22858,23750,26984,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	134115351	134147983	chr5:134115351-134147983	0	+	134115351	134115351	8553170	8	36,125,106,88,93,120,380,4392,	0,557,22707,23599,25444,26833,27369,28240,
#Partially deleted in new
chr5	134115562	134142304	chr5:134115562-134142304	0	+	134115937	134142304	789624	6	68,125,106,88,93,120,	0,346,22496,23388,25233,26622,
#Partially deleted in new
chr5	134115562	134142752	chr5:134115562-134142752	0	+	134115937	134142752	789624	6	68,125,106,88,120,32,	0,346,22496,23388,26622,27158,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	134115606	134148229	chr5:134115606-134148229	1	+	134115937	134146204	789624	10	68,125,106,88,120,163,108,49,73,2029,	0,302,22452,23344,26578,27114,27386,27985,29190,30594,
#Partially deleted in new
chr5	134115606	134142261	chr5:134115606-134142261	0	+	134115937	134142261	789624	6	68,125,106,88,93,77,	0,302,22452,23344,25189,26578,
#Partially deleted in new
chr5	134115609	134146573	chr5:134115609-134146573	1	+	134115937	134146303	789624	8	424,106,88,120,163,108,49,350,	0,22449,23341,26575,27111,27383,27982,30614,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	134115624	134148229	chr5:134115624-134148229	1	+	134115937	134146303	789624	9	50,125,106,88,120,163,108,49,2006,	0,284,22434,23326,26560,27096,27368,27967,30599,
#Partially deleted in new
chr5	134115624	134146185	chr5:134115624-134146185	1	+	134115937	134145820	789624	9	50,125,106,88,120,163,108,49,445,	0,284,22434,23326,26560,27096,27368,27967,30116,
#Partially deleted in new
chr5	134115640	134142747	chr5:134115640-134142747	0	+	134115937	134138998	789624	6	34,178,106,88,120,27,	0,268,22418,23310,26544,27080,
#Partially deleted in new
chr5	134115658	134142265	chr5:134115658-134142265	0	+	134115937	134138998	789624	5	428,106,88,93,81,	0,22400,23292,25137,26526,
#Partially deleted in new
chr5	134115910	134139858	chr5:134115910-134139858	0	+	134115910	134115910	8553170	3	123,106,908,	0,22148,23040,
#Partially deleted in new
chr5	134115955	134142813	chr5:134115955-134142813	0	+	134115955	134138196	789624	6	78,179,88,93,120,93,	0,22103,22995,24840,26229,26765,
#Partially deleted in new
chr5	134123617	134142814	chr5:134123617-134142814	0	+	134123735	134142814	789624	5	139,106,88,120,94,	0,14441,15333,18567,19103,
#Deleted in new
chr5	134137864	134139252	chr5:134137864-134139252	0	+	134137864	134137864	8553170	2	300,302,	0,1086,
#Deleted in new
chr5	134138103	134141350	chr5:134138103-134141350	0	+	134138103	134138103	8553170	4	61,88,93,330,	0,847,2692,2917,
#Deleted in new
chr5	134138600	134143040	chr5:134138600-134143040	0	+	134138600	134138600	8553170	4	438,120,163,48,	0,3584,4120,4392,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	134140534	134148236	chr5:134140534-134148236	0	+	134140534	134140534	8553170	6	354,120,757,49,73,2013,	0,1650,2186,3057,4262,5689,
#Deleted in new
chr5	134141463	134147027	chr5:134141463-134147027	0	+	134141463	134141463	8553170	5	841,163,108,49,804,	0,1257,1529,2128,4760,
#Deleted in new
chr5	134142184	134146707	chr5:134142184-134146707	0	+	134142184	134146521	789624	6	120,163,108,49,21,338,	0,536,808,1407,4039,4185,
#Deleted in new
chr5	134142215	134146303	chr5:134142215-134146303	0	+	134142215	134145294	789624	6	89,163,108,49,81,80,	0,505,777,1376,3044,4008,
#Partially deleted in new
chr5	134142791	134151865	chr5:134142791-134151865	0	+	134142791	134151723	789624	4	92,108,49,210,	0,201,800,8864,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	134148934	134177038	chr5:134148934-134177038	3	-	134157732	134174022	0	6	8834,141,144,74,97,184,	0,9520,12052,18235,24991,27920,
#Partially deleted in new
chr5	134157337	134176964	chr5:134157337-134176964	1	-	134158427	134174022	0	5	1258,144,74,97,110,	0,3649,9832,16588,19517,
#Partially deleted in new
chr5	134157391	134176920	chr5:134157391-134176920	1	-	134157732	134174022	789624	6	377,174,111,74,97,66,	0,1063,3628,9778,16534,19463,
#Partially deleted in new
chr5	134157473	134161897	chr5:134157473-134161897	0	-	134157473	134157473	8553170	2	1122,911,	0,3513,
#Partially deleted in new
chr5	134157507	134176719	chr5:134157507-134176719	1	-	134157732	134174022	0	7	261,141,144,74,97,53,106,	0,947,3479,9662,16418,16954,19106,
#Partially deleted in new
chr5	134157509	134176950	chr5:134157509-134176950	0	-	134171009	134174022	789624	7	259,141,144,74,88,97,96,	0,945,3477,9660,13441,16416,19345,
#Partially deleted in new
chr5	134157571	134176950	chr5:134157571-134176950	1	-	134157732	134174022	0	7	197,141,144,74,97,53,96,	0,883,3415,9598,16354,16890,19283,
#Partially deleted in new
chr5	134157940	134176950	chr5:134157940-134176950	0	-	134157940	134174022	789624	6	20,141,144,74,97,96,	0,514,3046,9229,15985,18914,
#Partially deleted in new
chr5	134158479	134176958	chr5:134158479-134176958	0	-	134173743	134174022	789624	7	116,144,74,66,97,53,104,	0,2507,8690,15221,15446,15982,18375,
#Partially deleted in new
chr5	134158483	134176950	chr5:134158483-134176950	0	-	134158483	134174022	789624	5	112,144,74,97,265,	0,2503,8686,15442,18202,
#Partially deleted in new
chr5	134160995	134174765	chr5:134160995-134174765	0	-	134160995	134174022	789624	4	135,74,97,304,	0,6174,12930,13466,
#Partially deleted in new
chr5	134167169	134226071	chr5:134167169-134226071	3	-	134167169	134225861	789624	3	74,97,312,	0,6756,58590,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	134173386	134176950	chr5:134173386-134176950	0	-	134173386	134173386	8553170	2	636,96,	0,3468,
#Deleted in new
chr5	134173966	134175570	chr5:134173966-134175570	0	-	134173966	134174022	789624	3	56,53,639,	0,495,965,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	134194333	134226142	chr5:134194333-134226142	3	-	134197771	134225861	0	7	3511,119,162,90,174,210,383,	0,4752,6001,6651,7514,11588,31426,
#Partially deleted in new
chr5	134197635	134199450	chr5:134197635-134199450	0	-	134197635	134197635	8553170	2	209,365,	0,1450,
#Partially deleted in new
chr5	134200973	134202485	chr5:134200973-134202485	0	-	134200973	134200973	8553170	2	101,638,	0,874,
#Partially deleted in new
chr5	134200987	134225554	chr5:134200987-134225554	0	-	134200987	134206038	789624	4	87,174,210,114,	0,860,4934,24453,
#Partially deleted in new
chr5	134201858	134224393	chr5:134201858-134224393	0	-	134201858	134224319	789624	3	163,210,137,	0,4063,22398,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	134203524	134226073	chr5:134203524-134226073	0	-	134203524	134203524	8553170	3	40,210,314,	0,2397,22235,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	134205613	134371043	chr5:134205613-134371043	0	-	134205613	134205613	8553170	10	518,98,163,94,329,154,89,140,113,46,	0,96976,98791,100995,102524,102960,106678,113744,116177,165384,
#Partially deleted in new
chr5	134205953	134371044	chr5:134205953-134371044	3	-	134205953	134205953	8553170	7	178,98,163,329,154,113,47,	0,96636,98451,102184,102620,115837,165044,
#Deleted in new
chr5	134225756	134225852	chr5:134225756-134225852	3	+	134225756	134225756	5263520	1	96,	0,
#Deleted in new
chr5	134226409	134227827	chr5:134226409-134227827	3	+	134226409	134226409	8553170	1	1418,	0,
#Deleted in new
chr5	134267420	134267856	chr5:134267420-134267856	7	+	134267420	134267420	16724991	1	436,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	134286349	134371042	chr5:134286349-134371042	0	-	134308703	134321875	789624	10	210,71,98,163,94,329,154,140,113,45,	0,15790,16240,18055,20259,21788,22224,33008,35441,84648,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	134286437	134371047	chr5:134286437-134371047	0	-	134308459	134321875	789624	9	122,98,163,94,329,89,140,113,50,	0,16152,17967,20171,21700,25854,32920,35353,84560,
#Partially deleted in new
chr5	134298418	134367074	chr5:134298418-134367074	3	-	134298650	134366523	0	13	292,98,163,94,329,154,89,140,113,179,195,186,98,	0,4171,5986,8190,9719,10155,13873,20939,23372,51830,61478,67940,68558,
#Partially deleted in new
chr5	134298431	134304422	chr5:134298431-134304422	0	-	134298676	134304422	789624	4	279,71,98,18,	0,3708,4158,5973,
#Partially deleted in new
chr5	134298628	134371041	chr5:134298628-134371041	1	-	134299696	134321875	789624	13	82,95,98,163,94,329,154,89,140,113,179,195,44,	0,1027,3961,5776,7980,9509,9945,13663,20729,23162,51620,61268,72369,
#Partially deleted in new
chr5	134299424	134367070	chr5:134299424-134367070	1	-	134299696	134366523	789624	13	326,98,163,94,329,154,89,140,113,179,195,186,94,	0,3165,4980,7184,8713,9149,12867,19933,22366,50824,60472,66934,67552,
#Partially deleted in new
chr5	134308000	134319389	chr5:134308000-134319389	0	-	134308703	134319389	789624	3	466,154,32,	0,573,11357,
#Partially deleted in new
chr5	134308000	134371004	chr5:134308000-134371004	1	-	134308416	134321875	789624	3	466,113,7,	0,13790,62997,
#Partially deleted in new
chr5	134308000	134366523	chr5:134308000-134366523	1	-	134308133	134366523	0	8	466,154,89,140,113,179,195,165,	0,573,4291,11357,13790,42248,51896,58358,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	134319030	134371043	chr5:134319030-134371043	0	-	134319030	134319030	8553170	4	133,140,113,46,	0,327,2760,51967,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	134371178	134391992	chr5:134371178-134391992	3	+	134371595	134390353	0	6	461,81,26,90,89,1768,	0,3204,5490,9540,17146,19046,
#Partially deleted in new
chr5	134371468	134390298	chr5:134371468-134390298	0	+	134371595	134388334	789624	4	171,81,89,74,	0,2914,16856,18756,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	134371501	134390436	chr5:134371501-134390436	0	+	134371501	134371501	8553170	3	138,109,571,	0,2881,18364,
#Partially deleted in new
chr5	134371603	134390573	chr5:134371603-134390573	0	+	134371603	134390353	789624	6	36,81,26,90,62,349,	0,2779,5065,9115,16748,18621,
#Partially deleted in new
chr5	134371605	134374583	chr5:134371605-134374583	0	+	134371605	134371605	8553170	2	34,201,	0,2777,
#Partially deleted in new
chr5	134385602	134390783	chr5:134385602-134390783	0	+	134385602	134385602	8553170	3	34,89,559,	0,2722,4622,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	134388137	134390605	chr5:134388137-134390605	0	+	134388137	134388137	8553170	2	276,381,	0,2087,
#Deleted in new
chr5	134394359	134395008	chr5:134394359-134395008	3	-	134394359	134394359	8553170	1	649,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	134399494	134401921	chr5:134399494-134401921	3	+	134399494	134399494	8553170	2	271,249,	0,2178,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	134402086	134411898	chr5:134402086-134411898	3	-	134402914	134411854	789624	3	840,100,283,	0,7816,9529,
#Partially deleted in new
chr5	134410548	134411881	chr5:134410548-134411881	1	-	134411063	134411854	789624	2	534,266,	0,1067,
#Partially deleted in new
chr5	134422837	134423335	chr5:134422837-134423335	7	+	134422837	134422837	16724991	1	498,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	134429050	134460615	chr5:134429050-134460615	3	-	134429050	134429050	789624	3	577,67,25,	0,834,31540,
#Partially deleted in new
chr5	134436710	134492519	chr5:134436710-134492519	3	+	134436710	134436710	8553170	2	323,391,	0,55418,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	134500177	134500284	chr5:134500177-134500284	3	-	134500177	134500177	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	134506551	134509229	chr5:134506551-134509229	3	+	134506551	134506551	789624	2	283,824,	0,1854,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	134517809	134518092	chr5:134517809-134518092	3	+	134517809	134517809	8553170	1	283,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	134522612	134523096	chr5:134522612-134523096	3	-	134522612	134522612	8553170	1	484,	0,
#Partially deleted in new
chr5	134524311	134559967	chr5:134524311-134559967	0	+	134535857	134559967	789624	5	118,58,95,158,138,	0,11546,13677,27740,35518,
#Partially deleted in new
chr5	134525656	134579474	chr5:134525656-134579474	1	+	134535857	134579317	789624	12	86,58,95,158,161,212,168,117,465,118,129,981,	0,10201,12332,26395,34173,35089,36543,38837,40459,47988,51111,52837,
#Partially deleted in new
chr5	134525661	134536790	chr5:134525661-134536790	0	+	134525661	134525661	8553170	3	350,58,141,	0,10196,10988,
#Partially deleted in new
chr5	134525672	134579814	chr5:134525672-134579814	1	+	134535857	134579317	789624	11	339,58,95,158,161,212,168,117,465,118,1321,	0,10185,12316,26379,34157,35073,36527,38821,40443,47972,52821,
#Partially deleted in new
chr5	134525741	134579475	chr5:134525741-134579475	1	+	134535857	134576863	789624	11	255,58,95,158,161,212,168,117,465,129,979,	0,10116,12247,26310,34088,35004,36458,38752,40374,51026,52755,
#Partially deleted in new
chr5	134526107	134583230	chr5:134526107-134583230	3	+	134535857	134579317	789624	11	179,58,95,158,161,212,168,117,465,118,4734,	0,9750,11881,25944,33722,34638,36092,38386,40008,47537,52389,
#Partially deleted in new
chr5	134526636	134562280	chr5:134526636-134562280	0	+	134535857	134562280	789624	7	122,58,95,158,161,212,81,	0,9221,11352,25415,33193,34109,35563,
#Partially deleted in new
chr5	134544435	134560871	chr5:134544435-134560871	0	+	134544435	134544435	8553170	4	103,158,161,126,	0,7616,15394,16310,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	134564171	134575737	chr5:134564171-134575737	0	+	134564171	134564171	8553170	3	439,465,2093,	0,1944,9473,
#Partially deleted in new
chr5	134573756	134579475	chr5:134573756-134579475	0	+	134573756	134576904	789624	3	6,271,979,	0,3011,4740,
#Partially deleted in new
chr5	134576765	134579474	chr5:134576765-134579474	1	+	134578576	134579317	789624	2	273,978,	0,1731,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	134601143	134632988	chr5:134601143-134632988	3	-	134606949	134624019	789624	7	5923,132,104,66,120,76,261,	0,7228,8427,11547,19789,22818,31584,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	134606429	134614903	chr5:134606429-134614903	0	-	134606429	134606429	8553170	4	637,132,104,2213,	0,1942,3141,6261,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	134606801	134632774	chr5:134606801-134632774	1	-	134606949	134624019	789624	8	265,132,104,66,120,76,119,47,	0,1570,2769,5889,14131,17160,25275,25926,
#Partially deleted in new
chr5	134606989	134624037	chr5:134606989-134624037	0	-	134609046	134624019	789624	7	77,132,158,104,66,120,76,	0,1382,1986,2581,5701,13943,16972,
#Partially deleted in new
chr5	134607036	134632769	chr5:134607036-134632769	0	-	134607036	134624019	789624	8	30,132,104,66,120,76,100,42,	0,1335,2534,5654,13896,16925,18740,25691,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	134609609	134632825	chr5:134609609-134632825	0	-	134609609	134624019	789624	6	65,66,120,76,123,98,	0,3081,11323,14352,22467,23118,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	134631601	134632809	chr5:134631601-134632809	0	-	134631601	134631601	8553170	2	594,82,	0,1126,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	134634838	134634945	chr5:134634838-134634945	3	-	134634838	134634838	8553170	1	107,	0,
#Partially deleted in new
chr5	134648788	134727823	chr5:134648788-134727823	3	+	134649076	134725094	0	23	385,468,174,78,161,173,103,127,110,113,119,56,207,121,159,174,111,176,138,105,93,104,2844,	0,12330,18034,23020,25826,26256,27234,30813,33584,38001,39392,43813,44938,48337,49110,54970,56538,59924,66235,69280,72209,74778,76191,
#Partially deleted in new
chr5	134648823	134693698	chr5:134648823-134693698	1	+	134649076	134693093	0	13	350,468,174,78,161,173,103,127,110,113,119,56,668,	0,12295,17999,22985,25791,26221,27199,30778,33549,37966,39357,43778,44207,
#Partially deleted in new
chr5	134679710	134692891	chr5:134679710-134692891	0	+	134679710	134692693	789624	5	18,110,113,119,290,	0,2662,7079,8470,12891,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	134701171	134701278	chr5:134701171-134701278	3	-	134701171	134701171	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	134715482	134715582	chr5:134715482-134715582	3	+	134715482	134715482	8553170	1	100,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	134738500	134752160	chr5:134738500-134752160	3	+	134738620	134750950	789624	4	292,461,66,1402,	0,2562,5486,12258,
#Partially deleted in new
chr5	134738582	134751377	chr5:134738582-134751377	1	+	134738620	134750763	789624	3	210,66,619,	0,5404,12176,
#Partially deleted in new
chr5	134758770	134790122	chr5:134758770-134790122	1	+	134758938	134790122	789624	12	185,189,97,166,152,114,166,121,176,122,79,17,	0,5133,12132,14925,18803,22362,23150,24174,25595,26694,29742,31335,
#Partially deleted in new
chr5	134758778	134829039	chr5:134758778-134829039	0	+	134758938	134790122	789624	23	177,189,97,166,152,114,166,121,176,122,79,117,83,165,163,194,138,150,177,219,145,74,381,	0,5125,12124,14917,18795,22354,23142,24166,25587,26686,29734,31327,31691,36071,37209,48969,52442,52917,57651,58717,60081,68168,69880,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr5	134758780	134831138	chr5:134758780-134831138	1	+	134758938	134828706	789624	23	175,189,144,97,166,152,114,166,121,176,122,79,83,165,163,194,138,150,177,219,145,74,2480,	0,5123,8136,12122,14915,18793,22352,23140,24164,25585,26684,29732,31689,36069,37207,48967,52440,52915,57649,58715,60079,68166,69878,
#Partially deleted in new
chr5	134758803	134829296	chr5:134758803-134829296	3	+	134758938	134828706	789624	23	152,189,144,97,166,152,114,166,121,176,122,79,83,165,163,194,138,150,174,219,145,74,638,	0,5100,8113,12099,14892,18770,22329,23117,24141,25562,26661,29709,31666,36046,37184,48944,52417,52892,57626,58692,60056,68143,69855,
#Partially deleted in new
chr5	134773784	134777894	chr5:134773784-134777894	0	+	134773784	134773784	8553170	2	77,321,	0,3789,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	134780735	134781952	chr5:134780735-134781952	0	+	134780735	134780735	8553170	2	511,32,	0,1185,
#Partially deleted in new
chr5	134781140	134784693	chr5:134781140-134784693	0	+	134781140	134781140	8553170	3	106,121,328,	0,1804,3225,
#Partially deleted in new
chr5	134782050	134794924	chr5:134782050-134794924	0	+	134782050	134784418	789624	6	36,176,122,79,83,75,	0,2315,3414,6462,8419,12799,
#Partially deleted in new
chr5	134782069	134794968	chr5:134782069-134794968	0	+	134782069	134782069	8553170	8	17,121,176,122,79,49,83,119,	0,875,2296,3395,6443,7146,8400,12780,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	134790152	134829932	chr5:134790152-134829932	0	+	134790152	134790152	8553170	10	70,83,165,163,194,625,1285,145,74,1274,	0,317,4697,5835,17595,21068,26277,28707,36794,38506,
#Partially deleted in new
chr5	134804777	134805132	chr5:134804777-134805132	7	-	134804777	134804777	16724991	1	355,	0,
#Partially deleted in new
chr5	134818915	134855133	chr5:134818915-134855133	0	+	134818915	134828706	789624	5	89,74,88,43,236,	0,8031,9743,14665,35982,
#Partially deleted in new
chr5	134825812	134829039	chr5:134825812-134829039	0	+	134825812	134825812	8553170	2	1208,381,	0,2846,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	134845679	134859109	chr5:134845679-134859109	1	+	134854900	134855467	789624	2	58,4212,	0,9218,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	134845987	134859737	chr5:134845987-134859737	3	+	134854900	134855467	789624	2	225,4840,	0,8910,
#Partially deleted in new
chr5	134846095	134859732	chr5:134846095-134859732	1	+	134854900	134857397	789624	3	117,430,2376,	0,8802,11261,
#Partially deleted in new
chr5	134846153	134855488	chr5:134846153-134855488	1	+	134854900	134855467	789624	3	59,201,591,	0,509,8744,
#Partially deleted in new
chr5	134846245	134854922	chr5:134846245-134854922	0	+	134854900	134854922	789624	2	618,25,	0,8652,
#Partially deleted in new
chr5	134854949	134857412	chr5:134854949-134857412	0	+	134854949	134857397	789624	2	213,56,	0,2407,
#Deleted in new
chr5	134863090	134863433	chr5:134863090-134863433	7	-	134863090	134863090	16724991	1	343,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	134873802	134901525	chr5:134873802-134901525	3	+	134874427	134899685	789624	5	728,488,164,131,2037,	0,13892,19689,22491,25686,
#Partially deleted in new
chr5	134874370	134900039	chr5:134874370-134900039	0	+	134874427	134893523	789624	4	160,164,131,551,	0,19121,21923,25118,
#Partially deleted in new
chr5	134874375	134888062	chr5:134874375-134888062	0	+	134874427	134888062	789624	2	155,362,	0,13325,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	134874396	134901511	chr5:134874396-134901511	0	+	134874427	134887773	789624	5	87,488,164,131,2023,	0,13298,19095,21897,25092,
#Partially deleted in new
chr5	134875095	134888180	chr5:134875095-134888180	0	+	134875136	134888180	789624	2	93,486,	0,12599,
#Partially deleted in new
chr5	134875341	134900128	chr5:134875341-134900128	0	+	134875341	134899685	789624	5	54,488,164,131,640,	0,12353,18150,20952,24147,
#Partially deleted in new
chr5	134888152	134896276	chr5:134888152-134896276	0	+	134888152	134888152	8553170	3	30,164,256,	0,5339,7868,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	134892177	134899899	chr5:134892177-134899899	0	+	134892177	134892177	8553170	3	1478,131,411,	0,4116,7311,
#Partially deleted in new
chr5	134893625	134899857	chr5:134893625-134899857	0	+	134893625	134899685	789624	3	30,119,369,	0,2680,5863,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	134899936	134901511	chr5:134899936-134901511	0	+	134899936	134899936	8553170	2	218,446,	0,1129,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	134904905	134961277	chr5:134904905-134961277	1	+	134905139	134960681	0	4	318,132,81,692,	0,5429,54134,55680,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	134905119	134969660	chr5:134905119-134969660	3	+	134905139	134960681	0	5	104,132,81,113,5191,	0,5215,53920,55466,59350,
#Partially deleted in new
chr5	134905172	135007959	chr5:134905172-135007959	0	+	134905172	134960681	789624	8	51,132,81,113,154,187,240,3,	0,5162,53867,55413,64766,69965,91100,102784,
#Deleted in new
chr5	134905234	134905691	chr5:134905234-134905691	3	+	134905234	134905234	8553170	1	457,	0,
#Partially deleted in new
chr5	134908829	134959095	chr5:134908829-134959095	0	+	134908829	134908829	8553170	3	173,132,56,	0,1505,50210,
#Deleted in new
chr5	134923302	134924049	chr5:134923302-134924049	7	-	134923302	134923302	16724991	1	747,	0,
#Deleted in new
chr5	134924122	134924644	chr5:134924122-134924644	7	+	134924122	134924122	16724991	1	522,	0,
#Deleted in new
chr5	134924647	134926459	chr5:134924647-134926459	7	-	134924647	134924647	16724991	1	1812,	0,
#Deleted in new
chr5	134926659	134928036	chr5:134926659-134928036	7	-	134926659	134926659	16724991	1	1377,	0,
#Deleted in new
chr5	134928029	134928326	chr5:134928029-134928326	7	-	134928029	134928029	16724991	1	297,	0,
#Deleted in new
chr5	134928038	134928112	chr5:134928038-134928112	3	+	134928038	134928038	5263520	1	74,	0,
#Deleted in new
chr5	134928392	134928527	chr5:134928392-134928527	7	-	134928392	134928392	16724991	1	135,	0,
#Partially deleted in new
chr5	134967905	135011707	chr5:134967905-135011707	3	+	134967991	135011623	789624	8	184,154,240,183,141,120,158,187,	0,2033,28367,40051,40935,41465,42467,43615,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	134967906	134995854	chr5:134967906-134995854	0	+	134967906	134967906	8553170	3	183,154,214,	0,2032,27734,
#Deleted in new
chr5	135027734	135034298	chr5:135027734-135034298	3	-	135028778	135033881	789624	3	1587,233,586,	0,3541,5978,
#Deleted in new
chr5	135028552	135034634	chr5:135028552-135034634	1	-	135028778	135033881	789624	4	769,233,237,66,	0,2723,5160,6016,
#Deleted in new
chr5	135029221	135033135	chr5:135029221-135033135	0	-	135029221	135033135	789624	3	100,233,291,	0,2054,3623,
#Deleted in new
chr5	135029286	135032010	chr5:135029286-135032010	0	-	135029286	135029286	8553170	2	35,735,	0,1989,
#Deleted in new
chr5	135031285	135034813	chr5:135031285-135034813	0	-	135031285	135033881	789624	3	223,237,127,	0,2427,3401,
#Deleted in new
chr5	135031335	135034757	chr5:135031335-135034757	0	-	135031335	135033881	789624	3	173,237,256,	0,2377,3166,
#Partially deleted in new
chr5	135033279	135344685	chr5:135033279-135344685	3	+	135033279	135033279	8553170	6	261,69,131,404,83,1531,	0,19174,140762,300478,304651,309875,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	135033381	135147200	chr5:135033381-135147200	1	+	135033381	135033381	8553170	5	159,69,112,89,118,	0,19072,41035,41918,113701,
#Partially deleted in new
chr5	135033441	135215565	chr5:135033441-135215565	0	+	135033441	135033441	8553170	5	99,69,112,131,150,	0,19012,40975,140600,181974,
#Deleted in new
chr5	135034520	135035894	chr5:135034520-135035894	3	+	135034520	135034520	8553170	1	1374,	0,
#Deleted in new
chr5	135038830	135040047	chr5:135038830-135040047	3	-	135038830	135038830	789624	2	391,452,	0,765,
#Deleted in new
chr5	135038840	135039696	chr5:135038840-135039696	0	-	135038840	135038840	8553170	2	381,96,	0,760,
#Partially deleted in new
chr5	135120525	135139681	chr5:135120525-135139681	3	+	135120525	135120525	8553170	3	46,54,432,	0,12701,18724,
#Partially deleted in new
chr5	135124379	135131249	chr5:135124379-135131249	3	-	135124379	135124379	8553170	2	244,297,	0,6573,
#Partially deleted in new
chr5	135128154	135337973	chr5:135128154-135337973	1	+	135128154	135128154	8553170	4	209,131,95,39,	0,45887,168340,209780,
#Partially deleted in new
chr5	135236233	135248179	chr5:135236233-135248179	3	-	135236233	135236233	789624	4	1756,152,200,54,	0,2919,11379,11892,
#Deleted in new
chr5	135247045	135247815	chr5:135247045-135247815	0	-	135247045	135247045	8553170	2	286,203,	0,567,
#Partially deleted in new
chr5	135333899	135399622	chr5:135333899-135399622	3	-	135334975	135389093	0	9	1242,175,90,100,111,198,107,205,561,	0,9360,12068,19046,26597,35506,36136,55022,65162,
#Partially deleted in new
chr5	135334380	135351544	chr5:135334380-135351544	0	-	135334380	135334380	8553170	4	761,175,90,718,	0,8879,11587,16446,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	135334380	135362901	chr5:135334380-135362901	0	-	135334380	135334380	8553170	4	761,175,90,9956,	0,8879,11587,18565,
#Partially deleted in new
chr5	135334382	135399887	chr5:135334382-135399887	1	-	135334975	135389093	0	9	759,175,90,100,108,198,107,205,139,	0,8877,11585,18563,26114,35023,35653,54539,65366,
#Partially deleted in new
chr5	135334409	135399211	chr5:135334409-135399211	1	-	135334975	135389093	0	9	732,175,90,91,111,198,107,205,150,	0,8850,11558,16413,26087,34996,35626,54512,64652,
#Partially deleted in new
chr5	135334416	135399222	chr5:135334416-135399222	0	-	135334416	135334416	8553170	8	725,175,90,111,198,107,205,161,	0,8843,11551,26080,34989,35619,54505,64645,
#Partially deleted in new
chr5	135334434	135347606	chr5:135334434-135347606	0	-	135334434	135334434	8553170	3	707,175,1639,	0,8825,11533,
#Partially deleted in new
chr5	135334472	135399238	chr5:135334472-135399238	0	-	135360759	135389093	789624	8	669,175,90,284,198,107,205,177,	0,8787,11495,26024,34933,35563,54449,64589,
#Partially deleted in new
chr5	135334855	135399229	chr5:135334855-135399229	1	-	135334975	135389093	789624	5	286,175,90,205,168,	0,8404,11112,54066,64206,
#Partially deleted in new
chr5	135334912	135399884	chr5:135334912-135399884	1	-	135334975	135389093	0	9	229,175,90,100,111,198,107,205,99,	0,8347,11055,18033,25584,34493,35123,54009,64873,
#Partially deleted in new
chr5	135335100	135345987	chr5:135335100-135345987	0	-	135335100	135335100	8553170	2	41,2728,	0,8159,
#Partially deleted in new
chr5	135337938	135358219	chr5:135337938-135358219	1	+	135337938	135337938	8553170	2	75,3171,	0,17110,
#Deleted in new
chr5	135345689	135350955	chr5:135345689-135350955	0	-	135345689	135345689	8553170	2	368,133,	0,5133,
#Partially deleted in new
chr5	135350695	135355564	chr5:135350695-135355564	0	+	135350695	135350695	8553170	2	227,516,	0,4353,
#Partially deleted in new
chr5	135350813	135399204	chr5:135350813-135399204	0	-	135350813	135350813	8553170	6	100,108,198,107,205,143,	0,9683,18592,19222,38108,48248,
#Partially deleted in new
chr5	135359396	135399177	chr5:135359396-135399177	0	-	135359396	135359396	8553170	6	232,108,198,107,205,116,	0,1100,10009,10639,29525,39665,
#Partially deleted in new
chr5	135359721	135389059	chr5:135359721-135389059	0	-	135359721	135359721	8553170	5	221,111,198,107,138,	0,775,9684,10314,29200,
#Partially deleted in new
chr5	135360415	135370146	chr5:135360415-135370146	0	-	135360415	135360415	8553170	3	189,198,111,	0,8990,9620,
#Partially deleted in new
chr5	135360518	135399206	chr5:135360518-135399206	0	-	135360518	135360518	8553170	4	86,198,107,145,	0,8887,9517,38543,
#Partially deleted in new
chr5	135369367	135399914	chr5:135369367-135399914	0	-	135369367	135369367	8553170	4	236,107,205,129,	0,668,19554,30418,
#Partially deleted in new
chr5	135369480	135399214	chr5:135369480-135399214	0	-	135369480	135369480	8553170	4	123,107,375,153,	0,555,19441,29581,
#Partially deleted in new
chr5	135388916	135399887	chr5:135388916-135399887	0	-	135388916	135388916	8553170	2	210,83,	0,10888,
#Deleted in new
chr5	135399279	135401296	chr5:135399279-135401296	3	+	135399279	135399279	8553170	1	2017,	0,
#Deleted in new
chr5	135444213	135447348	chr5:135444213-135447348	3	-	135446373	135447108	789624	1	3135,	0,
#Partially deleted in new
chr5	135444217	135452399	chr5:135444217-135452399	3	-	135449453	135449939	789624	2	5732,191,	0,7991,
#Partially deleted in new
chr5	135450612	135458697	chr5:135450612-135458697	3	+	135450612	135450612	8553170	2	110,394,	0,7691,
#Deleted in new
chr5	135534281	135535949	chr5:135534281-135535949	3	-	135534976	135535690	789624	1	1668,	0,
#Partially deleted in new
chr5	135559576	135634874	chr5:135559576-135634874	3	+	135559576	135559576	8553170	4	74,154,140,106,	0,41473,69660,75192,
#Partially deleted in new
chr5	135570678	135579064	chr5:135570678-135579064	1	-	135571852	135578778	789624	4	1190,114,106,350,	0,3893,7755,8036,
#Partially deleted in new
chr5	135570682	135579279	chr5:135570682-135579279	3	-	135571852	135578814	0	4	1186,114,106,565,	0,3889,7751,8032,
#Partially deleted in new
chr5	135579184	135634852	chr5:135579184-135634852	1	+	135579184	135579184	8553170	3	413,137,84,	0,50055,55584,
#Partially deleted in new
chr5	135579201	135889770	chr5:135579201-135889770	1	+	135852562	135880090	789624	11	396,140,188,404,44,72,259,258,134,130,1739,	0,50035,55567,233321,263214,271223,273361,292259,294819,300766,308830,
#Partially deleted in new
chr5	135609311	135813109	chr5:135609311-135813109	0	+	135609311	135609311	8553170	6	417,140,188,84,140,587,	0,19925,25457,62352,105370,203211,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	135648583	135653935	chr5:135648583-135653935	3	-	135648583	135648583	789624	3	1940,107,94,	0,3771,5258,
#Partially deleted in new
chr5	135742461	135746356	chr5:135742461-135746356	7	-	135742461	135742461	16724991	2	128,102,	0,3793,
#Deleted in new
chr5	135802984	135803075	chr5:135802984-135803075	3	-	135802984	135802984	5263520	1	91,	0,
#Partially deleted in new
chr5	135812666	135826582	chr5:135812666-135826582	0	+	135812666	135812666	8553170	2	260,117,	0,13799,
#Partially deleted in new
chr5	135821705	135826581	chr5:135821705-135826581	3	+	135821705	135821705	8553170	3	241,414,116,	0,2697,4760,
#Partially deleted in new
chr5	135821711	135826584	chr5:135821711-135826584	1	+	135821711	135821711	8553170	4	440,414,240,119,	0,2691,3186,4754,
#Partially deleted in new
chr5	135821779	135826581	chr5:135821779-135826581	1	+	135821779	135821779	8553170	4	372,414,271,116,	0,2623,3945,4686,
#Deleted in new
chr5	135826386	135827546	chr5:135826386-135827546	0	+	135826386	135826386	8553170	1	1160,	0,
#Partially deleted in new
chr5	135834648	135876380	chr5:135834648-135876380	1	+	135834847	135874733	789624	4	245,44,54,1719,	0,7767,15776,40013,
#Partially deleted in new
chr5	135834666	135883394	chr5:135834666-135883394	1	+	135834847	135883077	8553170	9	227,44,72,259,258,134,119,138,333,	0,7749,15758,17896,36794,39354,45312,46106,48395,
#Partially deleted in new
chr5	135834666	135883392	chr5:135834666-135883392	1	+	135834847	135882876	8553170	9	227,44,72,259,258,134,119,138,547,	0,7749,15758,17896,36794,39354,45312,46106,48179,
#Partially deleted in new
chr5	135834675	135872747	chr5:135834675-135872747	1	+	135834847	135871915	789624	5	218,44,72,259,1287,	0,7740,15749,17887,36785,
#Partially deleted in new
chr5	135834713	135883448	chr5:135834713-135883448	3	+	135834847	135880090	789624	8	180,44,72,259,258,134,130,387,	0,7702,15711,17849,36747,39307,45254,48348,
#Partially deleted in new
chr5	135834726	135888637	chr5:135834726-135888637	1	+	135834847	135888084	789624	5	167,44,72,259,606,	0,7689,15698,17836,53305,
#Partially deleted in new
chr5	135835103	135871625	chr5:135835103-135871625	0	+	135835145	135852645	789624	5	47,44,72,259,165,	0,7312,15321,17459,36357,
#Deleted in new
chr5	135880028	135883450	chr5:135880028-135883450	0	+	135880028	135880028	8553170	2	69,370,	0,3052,
#Partially deleted in new
chr5	135892245	135895827	chr5:135892245-135895827	3	-	135892390	135895816	789624	5	265,132,33,36,125,	0,1774,3194,3309,3457,
#Partially deleted in new
chr5	135897636	135900250	chr5:135897636-135900250	3	+	135897636	135897636	8553170	2	115,299,	0,2315,
#Partially deleted in new
chr5	135900352	135918161	chr5:135900352-135918161	3	-	135900352	135900352	8553170	5	174,269,89,84,155,	0,7817,9381,17321,17654,
#Partially deleted in new
chr5	135930316	135936701	chr5:135930316-135936701	5	+	135930316	135930316	16724991	5	164,95,120,102,108,	0,4038,5003,5306,6277,
#Partially deleted in new
chr5	135930317	135942746	chr5:135930317-135942746	4	+	135930317	135930317	16724991	7	163,99,120,102,367,123,1719,	0,4033,5002,5305,6276,7107,10710,
#Partially deleted in new
chr5	135930335	135936840	chr5:135930335-135936840	4	+	135930335	135930335	16724991	4	145,99,120,247,	0,4015,4984,6258,
#Partially deleted in new
chr5	135930402	135951591	chr5:135930402-135951591	7	+	135930402	135930402	16724991	7	78,27,157,123,673,204,480,	0,3948,6401,7022,10086,11380,20709,
#Partially deleted in new
chr5	135930402	135940871	chr5:135930402-135940871	4	+	135930402	135930402	16724991	5	78,27,157,123,383,	0,3948,6401,7022,10086,
#Partially deleted in new
chr5	135934367	135941671	chr5:135934367-135941671	5	+	135934367	135934367	16724991	5	82,366,123,172,644,	0,2227,3057,6121,6660,
#Partially deleted in new
chr5	135936794	135941678	chr5:135936794-135941678	4	+	135936794	135936794	16724991	3	166,123,1190,	0,630,3694,
#Partially deleted in new
chr5	135938583	135953116	chr5:135938583-135953116	0	-	135938583	135938583	8553170	4	251,169,146,246,	0,1928,12639,14287,
#Partially deleted in new
chr5	135941322	135951432	chr5:135941322-135951432	4	+	135941322	135941322	16724991	4	40,204,159,321,	0,460,9463,9789,
#Partially deleted in new
chr5	135946910	135955034	chr5:135946910-135955034	3	-	135947330	135954833	0	4	587,146,97,247,	0,4312,5960,7877,
#Partially deleted in new
chr5	135947149	135953138	chr5:135947149-135953138	1	-	135947330	135951295	789624	3	348,146,268,	0,4073,5721,
#Partially deleted in new
chr5	135950871	135954982	chr5:135950871-135954982	1	-	135951175	135954833	789624	3	497,97,195,	0,1999,3916,
#Partially deleted in new
chr5	136028894	136063817	chr5:136028894-136063817	3	+	136029055	136063226	0	17	295,99,65,161,165,147,142,213,138,146,137,131,125,103,80,25,632,	0,4868,15163,17440,17956,18379,20544,24012,25048,25821,26785,27770,30195,31939,32605,33768,34291,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	136028987	136046440	chr5:136028987-136046440	0	+	136028987	136028987	8553170	5	202,99,65,89,106,	0,4775,15070,15794,17347,
#Partially deleted in new
chr5	136028990	136063816	chr5:136028990-136063816	0	+	136028990	136028990	8553170	17	199,99,65,681,147,97,142,213,138,146,137,131,125,103,80,25,631,	0,4772,15067,17344,18283,19262,20448,23916,24952,25725,26689,27674,30099,31843,32509,33672,34195,
#Partially deleted in new
chr5	136029138	136063665	chr5:136029138-136063665	0	+	136029138	136046504	789624	17	51,99,65,222,165,147,142,213,138,146,137,131,125,103,80,25,480,	0,4624,14919,17196,17712,18135,20300,23768,24804,25577,26541,27526,29951,31695,32361,33524,34047,
#Partially deleted in new
chr5	136045744	136055189	chr5:136045744-136055189	0	+	136045744	136045744	8553170	4	3836,213,138,474,	0,7162,8198,8971,
#Partially deleted in new
chr5	136047323	136054818	chr5:136047323-136054818	0	+	136047323	136054818	789624	5	97,142,102,138,103,	0,2115,5694,6619,7392,
#Deleted in new
chr5	136047352	136049807	chr5:136047352-136049807	0	+	136047352	136047352	8553170	2	68,369,	0,2086,
#Partially deleted in new
chr5	136047417	136055392	chr5:136047417-136055392	0	+	136047417	136054879	789624	5	3,142,213,138,677,	0,2021,5489,6525,7298,
#Partially deleted in new
chr5	136049515	136063818	chr5:136049515-136063818	0	+	136049515	136063226	789624	9	65,213,138,146,137,131,125,103,633,	0,3391,4427,5200,6164,7149,9574,11318,13670,
#Partially deleted in new
chr5	136053942	136059145	chr5:136053942-136059145	0	+	136053942	136054715	789624	6	138,187,137,82,131,56,	0,732,1737,2506,2722,5147,
#Partially deleted in new
chr5	136055498	136059214	chr5:136055498-136059214	0	+	136055498	136055498	8553170	3	318,131,125,	0,1166,3591,
#Partially deleted in new
chr5	136058766	136061536	chr5:136058766-136061536	0	+	136058766	136058766	8553170	3	448,103,37,	0,2067,2733,
#Partially deleted in new
chr5	136058848	136063815	chr5:136058848-136063815	1	+	136060884	136063226	789624	6	71,125,103,80,25,630,	0,241,1985,2651,3814,4337,
#Partially deleted in new
chr5	136059185	136063372	chr5:136059185-136063372	0	+	136059185	136063209	789624	4	29,103,80,187,	0,1648,2314,4000,
#Deleted in new
chr5	136061189	136063803	chr5:136061189-136063803	0	+	136061189	136061189	8553170	3	390,25,618,	0,1473,1996,
#Deleted in new
chr5	136080469	136080597	chr5:136080469-136080597	3	-	136080469	136080469	8553170	1	128,	0,
#Deleted in new
chr5	136080496	136080597	chr5:136080496-136080597	3	-	136080496	136080496	789624	1	101,	0,
#Partially deleted in new
chr5	136129506	136134890	chr5:136129506-136134890	3	-	136129506	136129506	789624	2	275,1541,	0,3843,
#Deleted in new
chr5	136129515	136129781	chr5:136129515-136129781	3	+	136129515	136129515	8553170	1	266,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	136132844	136182732	chr5:136132844-136182732	1	+	136153760	136177480	789624	8	118,75,572,252,120,222,257,5396,	0,14987,20747,28011,30427,39589,41531,44492,
#Partially deleted in new
chr5	136132846	136154144	chr5:136132846-136154144	0	+	136153760	136154144	789624	2	116,553,	0,20745,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	136132846	136154163	chr5:136132846-136154163	0	+	136153760	136154163	789624	4	116,75,84,572,	0,14985,19828,20745,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	136132846	136182734	chr5:136132846-136182734	3	+	136153760	136177480	789624	7	116,572,252,120,222,257,5398,	0,20745,28009,30425,39587,41529,44490,
#Partially deleted in new
chr5	136132903	136177386	chr5:136132903-136177386	0	+	136132903	136132903	8553170	4	59,222,257,50,	0,39530,41472,44433,
#Partially deleted in new
chr5	136132913	136178005	chr5:136132913-136178005	1	+	136153760	136177480	789624	8	1046,75,572,252,120,222,257,669,	0,14918,20678,27942,30358,39520,41462,44423,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	136133223	136153729	chr5:136133223-136153729	0	+	136133223	136133223	8553170	4	250,75,84,138,	0,14608,19451,20368,
#Partially deleted in new
chr5	136133352	136153763	chr5:136133352-136153763	0	+	136153760	136153763	8553170	3	121,75,172,	0,14479,20239,
#Deleted in new
chr5	136133695	136133826	chr5:136133695-136133826	3	+	136133695	136133695	8553170	1	131,	0,
#Partially deleted in new
chr5	136133822	136154002	chr5:136133822-136154002	0	+	136153760	136154002	789624	2	137,411,	0,19769,
#Deleted in new
chr5	136133911	136134035	chr5:136133911-136134035	3	+	136133911	136133911	8553170	1	124,	0,
#Deleted in new
chr5	136134081	136134248	chr5:136134081-136134248	3	+	136134081	136134081	8553170	1	167,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	136147419	136153681	chr5:136147419-136153681	0	+	136147419	136147419	8553170	2	487,90,	0,6172,
#Partially deleted in new
chr5	136160985	136172829	chr5:136160985-136172829	0	+	136160985	136172714	789624	3	122,120,396,	0,2286,11448,
#Partially deleted in new
chr5	136174468	136188747	chr5:136174468-136188747	0	+	136174468	136187178	789624	3	164,156,203,	0,12692,14076,
#Deleted in new
chr5	136191467	136193134	chr5:136191467-136193134	3	-	136192212	136192524	789624	1	1667,	0,
#Partially deleted in new
chr5	136213319	136365537	chr5:136213319-136365537	3	-	136213434	136365254	789624	12	285,76,81,222,196,265,234,217,165,183,778,285,	0,2880,11954,12714,18034,34151,38329,52900,61353,102277,143288,151933,
#Partially deleted in new
chr5	136213348	136226437	chr5:136213348-136226437	0	-	136213348	136213348	8553170	4	256,76,81,404,	0,2851,11925,12685,
#Partially deleted in new
chr5	136213434	136365545	chr5:136213434-136365545	1	-	136213434	136365254	789624	10	170,76,81,222,196,265,234,217,778,293,	0,2765,11839,12599,17919,34036,38214,52785,143173,151818,
#Partially deleted in new
chr5	136213434	136365476	chr5:136213434-136365476	1	-	136213434	136365254	789624	11	170,76,81,222,196,265,234,217,165,778,224,	0,2765,11839,12599,17919,34036,38214,52785,61238,143173,151818,
#Partially deleted in new
chr5	136213434	136365537	chr5:136213434-136365537	1	-	136213434	136365254	789624	11	170,76,81,222,196,265,234,217,183,778,285,	0,2765,11839,12599,17919,34036,38214,52785,102162,143173,151818,
#Partially deleted in new
chr5	136213434	136365537	chr5:136213434-136365537	0	-	136274657	136365254	789624	12	170,76,81,222,196,265,234,217,181,183,778,285,	0,2765,11839,12599,17919,34036,38214,52785,61222,102162,143173,151818,
#Partially deleted in new
chr5	136213434	136365254	chr5:136213434-136365254	0	-	136251876	136365254	789624	9	170,76,81,222,196,265,234,778,2,	0,2765,11839,12599,17919,34036,38214,143173,151818,
#Partially deleted in new
chr5	136214047	136222159	chr5:136214047-136222159	3	+	136214047	136214047	8553170	2	376,84,	0,8028,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	136376347	136397042	chr5:136376347-136397042	3	-	136376347	136376347	8553170	2	259,155,	0,20540,
#Deleted in new
chr5	136381267	136381511	chr5:136381267-136381511	7	-	136381267	136381267	16724991	1	244,	0,
#Deleted in new
chr5	136428891	136429854	chr5:136428891-136429854	7	+	136428891	136428891	16724991	1	963,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	136466676	136520298	chr5:136466676-136520298	0	+	136466676	136466676	8553170	3	209,94,124,	0,37923,53498,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	136466676	136509028	chr5:136466676-136509028	3	+	136466676	136466676	8553170	3	209,94,373,	0,37923,41979,
#Deleted in new
chr5	136857627	136858342	chr5:136857627-136858342	7	+	136857627	136857627	16724991	1	715,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	136969199	136969306	chr5:136969199-136969306	7	-	136969199	136969199	16724991	1	107,	0,
#Partially deleted in new
chr5	136975297	137499348	chr5:136975297-137499348	3	-	136978653	137498558	789624	11	3547,138,63,222,117,115,127,115,46,186,170,	0,4034,9842,13124,17186,92417,137137,165282,291712,523075,523881,
#Partially deleted in new
chr5	136975299	137267055	chr5:136975299-137267055	1	-	136978653	137267055	789624	9	3545,138,63,222,117,115,127,115,46,	0,4032,9840,13122,17184,92415,137135,165280,291710,
#Partially deleted in new
chr5	136978453	136979500	chr5:136978453-136979500	0	-	136978453	136978453	8553170	2	391,169,	0,878,
#Partially deleted in new
chr5	136978791	136988837	chr5:136978791-136988837	0	-	136978791	136978791	8553170	5	53,138,63,222,96,	0,540,6348,9630,9950,
#Partially deleted in new
chr5	136988552	136993160	chr5:136988552-136993160	0	-	136988552	136988552	8553170	3	91,117,291,	0,3931,4317,
#Partially deleted in new
chr5	136992514	137313577	chr5:136992514-137313577	0	-	136992514	136992514	8553170	7	86,115,127,115,46,9,150,	0,75200,119920,148065,274495,280861,320913,
#Partially deleted in new
chr5	136992553	137499299	chr5:136992553-137499299	0	-	136992553	137112473	789624	6	47,115,127,115,46,121,	0,75161,119881,148026,274456,506625,
#Partially deleted in new
chr5	137112434	137313538	chr5:137112434-137313538	0	-	137112434	137112434	8553170	4	127,115,46,111,	0,28145,154575,200993,
#Partially deleted in new
chr5	137112491	137498594	chr5:137112491-137498594	0	-	137112491	137498558	789624	4	70,115,46,222,	0,28088,154518,385881,
#Partially deleted in new
chr5	137112493	137598379	chr5:137112493-137598379	0	-	137112493	137112493	8553170	5	68,115,46,69,182,	0,28086,154516,393145,485704,
#Partially deleted in new
chr5	137267014	137365461	chr5:137267014-137365461	0	-	137267014	137267014	8553170	2	41,512,	0,97935,
#Partially deleted in new
chr5	137617499	137736090	chr5:137617499-137736090	3	-	137622097	137735646	0	15	4627,144,141,129,102,198,118,150,117,110,163,122,107,120,458,	0,8253,10797,16537,19794,21453,22360,40631,44415,60045,74785,80787,92250,102965,118133,
#Partially deleted in new
chr5	137617499	137706436	chr5:137617499-137706436	1	-	137622097	137698403	0	13	4627,144,141,129,102,198,118,150,117,110,163,122,445,	0,8253,10797,16537,19794,21453,22360,40631,44415,60045,74785,80787,88492,
#Partially deleted in new
chr5	137617499	137721310	chr5:137617499-137721310	1	-	137622097	137720502	0	15	4627,144,141,129,102,198,118,150,117,110,163,122,107,120,633,	0,8253,10797,16537,19794,21453,22360,40631,44415,60045,74785,80787,92250,102965,103178,
#Partially deleted in new
chr5	137617658	137628680	chr5:137617658-137628680	0	-	137617658	137617658	8553170	2	206,622,	0,10400,
#Partially deleted in new
chr5	137621220	137629943	chr5:137621220-137629943	0	-	137621220	137621220	8553170	3	906,144,1647,	0,4532,7076,
#Partially deleted in new
chr5	137621501	137672927	chr5:137621501-137672927	0	-	137621501	137621501	8553170	9	625,144,141,129,198,118,150,117,261,	0,4251,6795,12535,17451,18358,36629,40413,51165,
#Partially deleted in new
chr5	137621938	137706427	chr5:137621938-137706427	0	-	137677611	137698403	789624	9	188,144,141,150,117,105,163,122,436,	0,3814,6358,36192,39976,55606,70346,76348,84053,
#Partially deleted in new
chr5	137634043	137673897	chr5:137634043-137673897	0	-	137634043	137634043	8553170	6	122,198,118,150,117,223,	0,4909,5816,24087,27871,39631,
#Partially deleted in new
chr5	137637293	137736015	chr5:137637293-137736015	0	-	137637293	137735646	789624	10	102,198,118,150,117,110,163,122,107,383,	0,1659,2566,20837,24621,40251,54991,60993,72456,98339,
#Deleted in new
chr5	137647571	137647649	chr5:137647571-137647649	3	-	137647571	137647571	5263520	1	78,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	137660710	137692685	chr5:137660710-137692685	0	-	137660710	137660710	8553170	3	1321,110,401,	0,16834,31574,
#Partially deleted in new
chr5	137671766	137673851	chr5:137671766-137673851	0	-	137671766	137671766	8553170	3	186,192,177,	0,900,1908,
#Partially deleted in new
chr5	137672753	137706139	chr5:137672753-137706139	0	-	137672753	137672753	8553170	5	105,110,163,122,148,	0,4791,19531,25533,33238,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	137677416	137698383	chr5:137677416-137698383	0	-	137677416	137677416	8553170	4	53,110,163,97,	0,128,14868,20870,
#Partially deleted in new
chr5	137706049	137735858	chr5:137706049-137735858	0	-	137706049	137706049	8553170	6	98,61,107,120,110,41,	0,1499,3700,14415,29583,29768,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	137745650	137754376	chr5:137745650-137754376	3	-	137753148	137754066	789624	1	8726,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	137761545	137761936	chr5:137761545-137761936	3	+	137761545	137761545	8553170	1	391,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	137801192	137810751	chr5:137801192-137810751	7	+	137801192	137801192	16724991	2	260,2728,	0,6831,
#Deleted in new
chr5	137808210	137809322	chr5:137808210-137809322	5	+	137808210	137808210	16724991	1	1112,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	137814332	137889317	chr5:137814332-137889317	3	-	137814332	137814332	8553170	5	265,54,208,129,171,	0,44095,44723,73827,74814,
#Partially deleted in new
chr5	137867790	137887851	chr5:137867790-137887851	3	+	137870651	137887385	789624	10	163,567,175,102,50,133,208,166,134,639,	0,2650,8038,9729,13025,14182,15593,18257,19073,19422,
#Partially deleted in new
chr5	137867857	137887537	chr5:137867857-137887537	1	+	137877540	137887385	789624	10	96,85,175,102,50,133,208,166,134,325,	0,2583,7971,9662,12958,14115,15526,18190,19006,19355,
#Partially deleted in new
chr5	137867859	137886104	chr5:137867859-137886104	0	+	137867859	137867859	8553170	6	94,85,175,102,50,57,	0,2581,7969,9660,12956,18188,
#Partially deleted in new
chr5	137867859	137876194	chr5:137867859-137876194	0	+	137867859	137867859	8553170	3	94,85,366,	0,2581,7969,
#Partially deleted in new
chr5	137867875	137887528	chr5:137867875-137887528	1	+	137870996	137887385	789624	11	78,85,131,175,102,50,133,208,166,134,316,	0,2565,3001,7953,9644,12940,14097,15508,18172,18988,19337,
#Partially deleted in new
chr5	137880614	137886167	chr5:137880614-137886167	0	+	137880614	137880614	8553170	3	251,208,120,	0,2769,5433,
#Partially deleted in new
chr5	137880617	137883584	chr5:137880617-137883584	0	+	137880617	137880617	8553170	3	248,133,201,	0,1355,2766,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	137882792	137889336	chr5:137882792-137889336	1	-	137882792	137882792	8553170	3	829,129,190,	0,5367,6354,
#Deleted in new
chr5	137886699	137887569	chr5:137886699-137887569	0	+	137886699	137886699	8553170	2	298,357,	0,513,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	137887967	137906277	chr5:137887967-137906277	0	+	137894355	137906277	789624	6	1227,102,47,257,222,72,	0,2513,4599,6385,11548,18238,
#Partially deleted in new
chr5	137889436	137940484	chr5:137889436-137940484	1	+	137889491	137936410	789624	13	86,102,134,257,222,229,171,102,65,55,113,108,689,	0,1044,3043,4916,10079,16769,18305,33983,35603,36438,46360,46883,50359,
#Partially deleted in new
chr5	137889457	137906399	chr5:137889457-137906399	0	+	137889491	137892564	789624	6	65,102,90,257,222,194,	0,1023,3066,4895,10058,16748,
#Partially deleted in new
chr5	137889460	137940417	chr5:137889460-137940417	1	+	137889491	137936410	789624	15	62,102,134,257,222,229,105,182,121,102,65,55,113,108,328,	0,1020,3019,4892,10055,16745,18347,19304,32175,33959,35579,36414,46336,46859,50629,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr5	137889465	137942747	chr5:137889465-137942747	3	+	137889491	137936410	789624	15	57,102,134,257,222,229,171,182,121,102,65,55,113,108,364,	0,1015,3014,4887,10050,16740,18276,19299,32170,33954,35574,36409,46331,46854,52918,
#Partially deleted in new
chr5	137889468	137940484	chr5:137889468-137940484	1	+	137889491	137940147	789624	14	54,102,134,257,222,229,171,182,121,102,65,55,113,395,	0,1012,3011,4884,10047,16737,18273,19296,32167,33951,35571,36406,46328,50621,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	137889963	137894607	chr5:137889963-137894607	0	+	137894355	137894607	789624	4	426,102,47,255,	0,517,2603,4389,
#Partially deleted in new
chr5	137937959	138033031	chr5:137937959-138033031	3	-	137940224	138019111	789624	23	2389,102,164,84,96,84,230,82,130,211,148,49,65,133,156,42,158,142,178,213,192,167,250,	0,3984,4915,5173,7942,8268,10995,14668,15376,16206,21656,22206,24445,47297,49501,50314,69030,73048,73808,80342,80995,83071,94822,
#Partially deleted in new
chr5	137940171	138033086	chr5:137940171-138033086	1	-	137940224	138018317	789624	22	177,102,164,84,96,230,82,130,211,66,148,49,65,133,156,42,158,142,178,213,167,305,	0,1772,2703,2961,5730,8783,12456,13164,13994,16305,19444,19994,22233,45085,47289,48102,66818,70836,71596,78130,80859,92610,
#Partially deleted in new
chr5	137940180	138033085	chr5:137940180-138033085	1	-	137940224	138019111	789624	22	168,102,164,84,96,230,82,130,211,148,49,65,133,156,42,158,142,178,213,192,167,304,	0,1763,2694,2952,5721,8774,12447,13155,13985,19435,19985,22224,45076,47280,48093,66809,70827,71587,78121,78774,80850,92601,
#Partially deleted in new
chr5	137943194	137946395	chr5:137943194-137946395	0	-	137943194	137943194	8553170	2	22,494,	0,2707,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	137953345	137954624	chr5:137953345-137954624	0	-	137953345	137953345	8553170	2	120,459,	0,820,
#Partially deleted in new
chr5	138011889	138038606	chr5:138011889-138038606	0	-	138011889	138019111	789624	5	56,213,192,167,41,	0,6412,7065,9141,26676,
#Partially deleted in new
chr5	138018385	138051961	chr5:138018385-138051961	0	-	138018385	138019111	789624	4	129,192,167,84,	0,569,2645,33492,
#Partially deleted in new
chr5	138018408	138034028	chr5:138018408-138034028	0	-	138018408	138019111	789624	5	106,192,167,97,28,	0,546,2622,15364,15592,
#Partially deleted in new
chr5	138020762	138032928	chr5:138020762-138032928	0	-	138020762	138020762	8553170	2	435,147,	0,12019,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	138032773	138037266	chr5:138032773-138037266	3	+	138032773	138032773	789624	2	179,1074,	0,3419,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	138039198	138039979	chr5:138039198-138039979	3	+	138039198	138039198	8553170	2	380,266,	0,515,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	138069354	138069458	chr5:138069354-138069458	3	-	138069354	138069354	8553170	1	104,	0,
#Partially deleted in new
chr5	138083891	138091270	chr5:138083891-138091270	1	+	138084127	138091073	789624	5	392,139,126,143,743,	0,606,3914,5035,6636,
#Partially deleted in new
chr5	138083989	138092365	chr5:138083989-138092365	0	+	138084089	138091387	789624	8	168,34,139,126,143,529,183,275,	0,260,508,3816,4937,6538,7369,8101,
#Partially deleted in new
chr5	138084014	138091459	chr5:138084014-138091459	0	+	138084127	138091459	789624	6	269,139,126,143,480,36,	0,483,3791,4912,6513,7409,
#Partially deleted in new
chr5	138084084	138091510	chr5:138084084-138091510	3	+	138084089	138091073	789624	6	73,34,139,126,143,983,	0,165,413,3721,4842,6443,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	138115171	138139415	chr5:138115171-138139415	3	-	138115680	138138780	789624	6	593,119,101,206,134,45,	0,3646,13307,14091,23480,24199,
#Partially deleted in new
chr5	138115406	138128643	chr5:138115406-138128643	0	-	138115406	138115406	8553170	3	358,119,165,	0,3411,13072,
#Deleted in new
chr5	138115552	138116381	chr5:138115552-138116381	0	-	138115552	138115552	8553170	2	212,140,	0,689,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	138116572	138116680	chr5:138116572-138116680	3	+	138116572	138116572	8553170	1	108,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	138123010	138123111	chr5:138123010-138123111	3	-	138123010	138123010	8553170	1	101,	0,
#Partially deleted in new
chr5	138127432	138129435	chr5:138127432-138129435	0	-	138127432	138127432	8553170	3	269,101,173,	0,1046,1830,
#Partially deleted in new
chr5	138129420	138139167	chr5:138129420-138139167	0	-	138129420	138129420	8553170	2	48,516,	0,9231,
#Partially deleted in new
chr5	138138340	138139443	chr5:138138340-138139443	0	-	138138340	138138340	8553170	2	413,73,	0,1030,
#Partially deleted in new
chr5	138139765	138178986	chr5:138139765-138178986	3	-	138140073	138178614	789624	27	401,178,69,90,158,264,279,45,105,178,69,93,215,47,94,453,281,210,145,137,65,81,123,50,70,97,391,	0,939,5411,6023,9874,10979,12716,19789,20303,21125,22030,22288,23364,24321,24554,24948,26062,26752,28168,29456,30579,31066,31272,31595,32299,37805,38830,
#Partially deleted in new
chr5	138140626	138152655	chr5:138140626-138152655	0	-	138140626	138152655	789624	6	256,69,90,158,264,174,	0,4550,5162,9013,10118,11855,
#Partially deleted in new
chr5	138156881	138178630	chr5:138156881-138178630	1	-	138157207	138178614	789624	22	386,45,105,178,69,93,215,47,94,453,281,210,145,219,137,65,81,123,50,70,97,35,	0,2673,3187,4009,4914,5172,6248,7205,7438,7832,8946,9636,11052,11588,12340,13463,13950,14156,14479,15183,20689,21714,
#Partially deleted in new
chr5	138156881	138178633	chr5:138156881-138178633	1	-	138157207	138178614	789624	21	386,45,105,178,69,93,215,47,94,453,281,210,145,137,65,81,123,50,70,97,38,	0,2673,3187,4009,4914,5172,6248,7205,7438,7832,8946,9636,11052,12340,13463,13950,14156,14479,15183,20689,21714,
#Partially deleted in new
chr5	138156881	138178599	chr5:138156881-138178599	0	-	138157207	138178599	789624	20	386,105,178,69,93,215,47,94,453,281,145,219,137,65,81,123,50,70,97,4,	0,3187,4009,4914,5172,6248,7205,7438,7832,8946,11052,11588,12340,13463,13950,14156,14479,15183,20689,21714,
#Partially deleted in new
chr5	138156881	138177667	chr5:138156881-138177667	0	-	138157207	138177667	789624	19	386,105,178,69,93,215,47,94,453,281,145,219,128,65,81,123,50,70,97,	0,3187,4009,4914,5172,6248,7205,7438,7832,8946,11052,11588,12340,13463,13950,14156,14479,15183,20689,
#Partially deleted in new
chr5	138156881	138178599	chr5:138156881-138178599	0	-	138157207	138178599	789624	21	386,105,178,69,93,215,47,94,453,281,93,145,219,137,65,81,123,50,70,97,4,	0,3187,4009,4914,5172,6248,7205,7438,7832,8946,9636,11052,11588,12340,13463,13950,14156,14479,15183,20689,21714,
#Partially deleted in new
chr5	138156881	138160129	chr5:138156881-138160129	0	-	138157891	138160129	789624	4	386,253,45,61,	0,760,2673,3187,
#Partially deleted in new
chr5	138156896	138178669	chr5:138156896-138178669	1	-	138157207	138178614	789624	20	371,105,178,69,93,215,47,94,453,281,145,219,137,65,81,123,50,70,97,74,	0,3172,3994,4899,5157,6233,7190,7423,7817,8931,11037,11573,12325,13448,13935,14141,14464,15168,20674,21699,
#Partially deleted in new
chr5	138156914	138178630	chr5:138156914-138178630	0	-	138171379	138178614	789624	20	353,45,105,178,69,93,215,47,94,453,281,210,145,137,65,81,123,50,97,35,	0,2640,3154,3976,4881,5139,6215,7172,7405,7799,8913,9603,11019,12307,13430,13917,14123,14446,20656,21681,
#Deleted in new
chr5	138159574	138161235	chr5:138159574-138161235	0	-	138159574	138159574	8553170	3	25,105,345,	0,494,1316,
#Partially deleted in new
chr5	138160090	138162087	chr5:138160090-138162087	0	-	138160090	138160090	8553170	3	83,178,292,	0,800,1705,
#Partially deleted in new
chr5	138160894	138164952	chr5:138160894-138164952	0	-	138160894	138160894	8553170	6	174,69,93,57,94,239,	0,901,1159,2692,3425,3819,
#Partially deleted in new
chr5	138160967	138166061	chr5:138160967-138166061	0	-	138163592	138166061	789624	9	101,69,93,215,57,47,94,453,234,	0,828,1086,2162,2619,3119,3352,3746,4860,
#Partially deleted in new
chr5	138162051	138165962	chr5:138162051-138165962	0	-	138162051	138165962	789624	5	95,215,47,94,135,	0,1078,2035,2268,3776,
#Partially deleted in new
chr5	138165021	138166225	chr5:138165021-138166225	0	-	138165021	138165021	8553170	2	145,398,	0,806,
#Partially deleted in new
chr5	138165111	138166945	chr5:138165111-138166945	0	-	138165111	138165111	8553170	3	55,281,428,	0,716,1406,
#Partially deleted in new
chr5	138165998	138171060	chr5:138165998-138171060	0	-	138165998	138171060	789624	6	110,145,137,65,81,23,	0,1935,3223,4346,4833,5039,
#Partially deleted in new
chr5	138167642	138170880	chr5:138167642-138170880	0	-	138167642	138167642	8553170	4	436,137,65,49,	0,1579,2702,3189,
#Partially deleted in new
chr5	138167986	138178629	chr5:138167986-138178629	0	-	138177566	138178614	789624	9	92,137,65,81,123,50,70,102,34,	0,1235,2358,2845,3051,3374,4078,9579,10609,
#Partially deleted in new
chr5	138169262	138178953	chr5:138169262-138178953	0	-	138171356	138178614	789624	8	96,65,81,123,66,70,97,358,	0,1082,1569,1775,2082,2802,8308,9333,
#Partially deleted in new
chr5	138169362	138178629	chr5:138169362-138178629	0	-	138169362	138169362	8553170	8	26,65,81,123,50,70,97,34,	0,982,1469,1675,1998,2702,8208,9233,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	138170380	138178628	chr5:138170380-138178628	0	-	138172738	138178614	789624	8	29,81,123,50,70,107,97,33,	0,451,657,980,1684,2339,7190,8215,
#Partially deleted in new
chr5	138170729	138178629	chr5:138170729-138178629	0	-	138170729	138170729	8553170	6	183,123,50,70,97,34,	0,308,631,1335,6841,7866,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	138171360	138178678	chr5:138171360-138178678	0	-	138171360	138178614	789624	5	50,70,132,97,83,	0,704,1359,6210,7235,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	138177163	138178638	chr5:138177163-138178638	0	-	138177163	138177163	8553170	2	504,43,	0,1432,
#Partially deleted in new
chr5	138178718	138182425	chr5:138178718-138182425	0	+	138179680	138182425	789624	5	132,186,90,120,103,	0,941,2703,2890,3604,
#Partially deleted in new
chr5	138178997	138187715	chr5:138178997-138187715	3	+	138179680	138187413	789624	19	205,186,90,120,139,188,130,195,112,69,144,166,165,140,103,199,92,138,620,	0,662,2424,2611,3325,3588,3863,4171,4472,4690,4964,5241,5514,5809,6097,6514,6963,7296,8098,
#Partially deleted in new
chr5	138179159	138187665	chr5:138179159-138187665	1	+	138179680	138187413	789624	20	43,186,27,9,120,139,188,130,195,112,69,144,166,165,140,103,199,92,138,570,	0,500,2262,2343,2449,3163,3426,3701,4009,4310,4528,4802,5079,5352,5647,5935,6352,6801,7134,7936,
#Partially deleted in new
chr5	138179167	138181704	chr5:138179167-138181704	0	+	138179167	138179167	8553170	3	678,90,96,	0,2254,2441,
#Partially deleted in new
chr5	138179168	138181896	chr5:138179168-138181896	0	+	138179168	138179168	8553170	4	34,186,90,288,	0,491,2253,2440,
#Partially deleted in new
chr5	138179220	138182747	chr5:138179220-138182747	0	+	138179680	138182747	789624	6	113,186,90,120,139,162,	0,439,2201,2388,3102,3365,
#Deleted in new
chr5	138184827	138187243	chr5:138184827-138187243	0	+	138184827	138185987	789624	5	119,103,92,138,148,	0,267,1133,1466,2268,
#Partially deleted in new
chr5	138187647	138213343	chr5:138187647-138213343	3	-	138188977	138213312	0	16	1501,120,79,62,76,120,154,82,98,178,133,106,43,138,73,192,	0,1985,2180,3826,4214,4621,4856,10551,10778,10957,13459,13695,14465,18899,25343,25504,
#Partially deleted in new
chr5	138188986	138190107	chr5:138188986-138190107	0	-	138188986	138188986	8553170	3	162,120,280,	0,646,841,
#Partially deleted in new
chr5	138189113	138190070	chr5:138189113-138190070	0	-	138189113	138189113	8553170	2	35,438,	0,519,
#Partially deleted in new
chr5	138189669	138198623	chr5:138189669-138198623	0	-	138189669	138189669	8553170	8	83,79,62,527,154,82,98,19,	0,158,1804,2192,2834,8529,8756,8935,
#Partially deleted in new
chr5	138200926	138213215	chr5:138200926-138213215	0	-	138200926	138200926	8553170	6	313,106,43,138,73,64,	0,416,1186,5620,12064,12225,
#Partially deleted in new
chr5	138201106	138213323	chr5:138201106-138213323	0	-	138201417	138213312	789624	4	133,106,138,172,	0,236,5440,12045,
#Partially deleted in new
chr5	138201164	138213304	chr5:138201164-138213304	0	-	138202112	138213304	789624	6	75,106,43,134,73,153,	0,178,948,5382,11826,11987,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	138205870	138213343	chr5:138205870-138213343	1	-	138206462	138213312	0	3	814,73,192,	0,7120,7281,
#Partially deleted in new
chr5	138206470	138213323	chr5:138206470-138213323	1	-	138206542	138213312	789624	3	210,73,172,	0,6520,6681,
#Partially deleted in new
chr5	138252378	138274671	chr5:138252378-138274671	3	-	138252967	138274424	0	8	679,89,135,104,313,93,288,338,	0,908,1387,1678,5260,7178,11882,21955,
#Partially deleted in new
chr5	138252381	138274565	chr5:138252381-138274565	1	-	138252967	138274424	0	7	676,89,135,104,313,288,232,	0,905,1384,1675,5257,11879,21952,
#Partially deleted in new
chr5	138266995	138267757	chr5:138266995-138267757	7	-	138266995	138266995	16724991	2	192,267,	0,495,
#Partially deleted in new
chr5	138285264	138331835	chr5:138285264-138331835	1	-	138285691	138331180	0	14	577,112,134,99,63,102,147,156,90,34,46,95,232,241,	0,757,1232,1904,4236,5374,6705,33954,40550,40756,43219,44288,45722,46330,
#Partially deleted in new
chr5	138285264	138331877	chr5:138285264-138331877	1	-	138285691	138331180	0	11	577,112,134,99,63,102,147,156,46,232,283,	0,757,1232,1904,4236,5374,6705,33954,43219,45722,46330,
#Partially deleted in new
chr5	138285572	138331794	chr5:138285572-138331794	1	-	138285691	138331180	0	11	269,112,134,99,63,102,147,156,46,228,200,	0,449,924,1596,3928,5066,6397,33646,42911,45414,46022,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr5	138285576	138331869	chr5:138285576-138331869	0	-	138317002	138331180	8553170	16	265,112,134,99,63,102,147,136,155,156,90,34,46,95,228,275,	0,445,920,1592,3924,5062,6393,17970,31355,33642,40238,40444,42907,43976,45410,46018,
#Partially deleted in new
chr5	138285579	138338355	chr5:138285579-138338355	3	-	138285691	138331180	0	14	262,112,134,99,63,102,147,156,90,34,46,95,228,400,	0,442,917,1589,3921,5059,6390,33639,40235,40441,42904,43973,45407,52376,
#Partially deleted in new
chr5	138285691	138331180	chr5:138285691-138331180	1	-	138285691	138331180	0	12	150,112,134,99,63,102,147,156,34,46,95,194,	0,330,805,1477,3809,4947,6278,33527,40329,42792,43861,45295,
#Partially deleted in new
chr5	138285743	138292114	chr5:138285743-138292114	0	-	138285743	138292114	789624	7	98,112,134,99,84,102,145,	0,278,753,1425,3736,4895,6226,
#Partially deleted in new
chr5	138291984	138331872	chr5:138291984-138331872	0	-	138291984	138331180	789624	8	132,156,90,34,46,95,228,278,	0,27234,33830,34036,36499,37568,39002,39610,
#Partially deleted in new
chr5	138325814	138338325	chr5:138325814-138338325	0	-	138325814	138337968	789624	6	90,34,46,95,232,370,	0,206,2669,3738,5172,12141,
#Partially deleted in new
chr5	138325917	138328882	chr5:138325917-138328882	0	-	138325917	138325917	8553170	2	137,399,	0,2566,
#Partially deleted in new
chr5	138331934	138345058	chr5:138331934-138345058	0	+	138331934	138331934	8553170	6	35,96,51,101,41,234,	0,1498,3153,3450,11774,12890,
#Partially deleted in new
chr5	138332104	138337146	chr5:138332104-138337146	0	+	138332104	138332104	789624	4	81,96,101,273,	0,1328,3280,4769,
#Partially deleted in new
chr5	138333676	138337090	chr5:138333676-138337090	0	+	138333676	138333676	8553170	4	63,101,19,217,	0,1708,3112,3197,
#Partially deleted in new
chr5	138337510	138346972	chr5:138337510-138346972	1	+	138341335	138346959	789624	5	342,230,58,785,271,	0,3673,4298,7314,9191,
#Partially deleted in new
chr5	138337553	138345455	chr5:138337553-138345455	0	+	138337553	138337553	8553170	3	299,58,631,	0,4255,7271,
#Partially deleted in new
chr5	138338014	138345245	chr5:138338014-138345245	0	+	138338014	138338014	8553170	3	293,58,421,	0,3794,6810,
#Partially deleted in new
chr5	138338031	138349729	chr5:138338031-138349729	3	+	138341335	138346959	789624	5	276,230,58,785,3028,	0,3152,3777,6793,8670,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	138338265	138343023	chr5:138338265-138343023	0	+	138338265	138338265	8553170	2	42,1840,	0,2918,
#Partially deleted in new
chr5	138338265	138347080	chr5:138338265-138347080	1	+	138341335	138345604	789624	5	42,230,58,214,379,	0,2918,3543,7130,8436,
#Partially deleted in new
chr5	138338266	138345215	chr5:138338266-138345215	0	+	138341216	138345215	789624	4	41,81,58,391,	0,2917,3542,6558,
#Partially deleted in new
chr5	138341180	138345308	chr5:138341180-138345308	0	+	138341180	138341180	8553170	2	233,484,	0,3644,
#Deleted in new
chr5	138347026	138349641	chr5:138347026-138349641	3	-	138347026	138347026	8553170	2	71,340,	0,2275,
#Partially deleted in new
chr5	138352595	138437027	chr5:138352595-138437027	3	+	138352795	138435700	0	24	392,168,114,106,125,75,600,1249,202,215,153,108,128,280,257,267,172,91,131,120,140,177,135,1408,	0,20078,22497,25124,26988,28920,33426,38417,40575,45582,47264,62536,64887,66357,68110,71479,72815,74379,74593,75371,77230,77653,78829,83024,
#Partially deleted in new
chr5	138372673	138437028	chr5:138372673-138437028	0	+	138372673	138386356	789624	24	168,114,106,125,75,169,333,1249,202,215,153,108,128,280,257,267,172,91,131,120,140,177,135,1409,	0,2419,5046,6910,8842,13348,13615,18339,20497,25504,27186,42458,44809,46279,48032,51401,52737,54301,54515,55293,57152,57575,58751,62946,
#Partially deleted in new
chr5	138372792	138381748	chr5:138372792-138381748	0	+	138372792	138372792	8553170	5	49,114,106,125,233,	0,2300,4927,6791,8723,
#Partially deleted in new
chr5	138377810	138436937	chr5:138377810-138436937	1	+	138398352	138435700	0	17	15,96,46,153,108,128,280,257,267,172,91,131,120,140,177,135,1318,	0,1773,20536,22049,37321,39672,41142,42895,46264,47600,49164,49378,50156,52015,52438,53614,57809,
#Partially deleted in new
chr5	138386576	138436032	chr5:138386576-138436032	0	+	138386576	138393188	789624	17	45,202,215,153,108,128,280,257,267,172,91,131,120,140,177,135,413,	0,6594,11601,13283,28555,30906,32376,34129,37498,38834,40398,40612,41390,43249,43672,44848,49043,
#Partially deleted in new
chr5	138397877	138399899	chr5:138397877-138399899	0	+	138397877	138397877	8553170	2	515,40,	0,1982,
#Partially deleted in new
chr5	138417807	138420785	chr5:138417807-138420785	0	+	138417807	138417807	8553170	3	180,280,80,	0,1145,2898,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	138424134	138425857	chr5:138424134-138425857	0	+	138424134	138424134	8553170	2	207,447,	0,1276,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	138426740	138428086	chr5:138426740-138428086	0	+	138426740	138426740	8553170	3	325,131,120,	0,448,1226,
#Partially deleted in new
chr5	138439016	138446964	chr5:138439016-138446964	1	+	138439208	138445751	789624	8	224,73,77,121,114,148,131,1282,	0,1999,2368,5398,5737,6211,6451,6666,
#Partially deleted in new
chr5	138439086	138446969	chr5:138439086-138446969	3	+	138439208	138445751	789624	8	154,73,77,121,114,142,131,1287,	0,1929,2298,5328,5667,6147,6381,6596,
#Partially deleted in new
chr5	138439101	138445831	chr5:138439101-138445831	1	+	138441393	138445751	789624	8	139,148,77,121,114,142,131,149,	0,1839,2283,5313,5652,6132,6366,6581,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	138439109	138443858	chr5:138439109-138443858	0	+	138439109	138439109	8553170	4	131,73,77,272,	0,1906,2275,4477,
#Partially deleted in new
chr5	138439110	138444705	chr5:138439110-138444705	0	+	138439110	138439110	8553170	4	130,73,77,291,	0,1905,2274,5304,
#Partially deleted in new
chr5	138439110	138445349	chr5:138439110-138445349	0	+	138439208	138444432	789624	5	130,73,121,114,122,	0,1905,5304,5643,6117,
#Partially deleted in new
chr5	138439167	138445118	chr5:138439167-138445118	0	+	138439167	138439167	8553170	5	73,73,77,121,365,	0,1848,2217,5247,5586,
#Partially deleted in new
chr5	138439681	138445269	chr5:138439681-138445269	0	+	138439681	138445269	789624	6	145,73,77,121,114,42,	0,1334,1703,4733,5072,5546,
#Partially deleted in new
chr5	138441015	138446964	chr5:138441015-138446964	1	+	138441393	138445474	789624	8	73,77,121,114,99,47,131,1282,	0,369,3399,3738,4212,4313,4452,4667,
#Partially deleted in new
chr5	138444327	138445798	chr5:138444327-138445798	0	+	138444327	138444327	8553170	5	208,114,148,131,116,	0,426,900,1140,1355,
#Partially deleted in new
chr5	138444997	138445723	chr5:138444997-138445723	0	+	138444997	138444997	8553170	3	378,131,41,	0,470,685,
#Partially deleted in new
chr5	138454539	138454732	chr5:138454539-138454732	7	-	138454539	138454539	16724991	1	193,	0,
#Deleted in new
chr5	138465489	138469315	chr5:138465489-138469315	3	+	138465761	138468081	0	2	579,2559,	0,1267,
#Deleted in new
chr5	138473743	138474361	chr5:138473743-138474361	7	+	138473743	138473743	16724991	1	618,	0,
#Partially deleted in new
chr5	138506094	138543229	chr5:138506094-138543229	1	-	138508304	138518854	0	11	2293,148,65,156,130,191,139,140,176,303,133,	0,2574,4470,4950,5380,6669,7473,11466,12597,36539,37002,
#Partially deleted in new
chr5	138506098	138543300	chr5:138506098-138543300	3	-	138508304	138542918	0	11	2289,148,65,156,130,191,139,140,176,104,204,	0,2570,4466,4946,5376,6665,7469,11462,12593,36734,36998,
#Partially deleted in new
chr5	138507989	138541711	chr5:138507989-138541711	1	-	138508304	138541562	789624	10	398,148,65,156,130,191,139,140,176,193,	0,679,2575,3055,3485,4774,5578,9571,10702,33529,
#Partially deleted in new
chr5	138511103	138517662	chr5:138511103-138517662	0	-	138511103	138511103	8553170	4	501,191,139,102,	0,1660,2464,6457,
#Partially deleted in new
chr5	138511524	138543151	chr5:138511524-138543151	0	-	138513680	138542918	789624	6	80,191,139,176,104,55,	0,1239,2043,7167,31308,31572,
#Partially deleted in new
chr5	138512698	138517641	chr5:138512698-138517641	0	-	138512698	138512698	8553170	3	256,139,81,	0,869,4862,
#Partially deleted in new
chr5	138512771	138543216	chr5:138512771-138543216	0	-	138512771	138518854	789624	6	183,139,140,176,232,120,	0,796,4789,5920,29933,30325,
#Partially deleted in new
chr5	138513650	138543209	chr5:138513650-138543209	0	-	138513650	138518854	789624	6	56,140,176,124,104,113,	0,3910,5041,15904,29182,29446,
#Partially deleted in new
chr5	138517560	138541686	chr5:138517560-138541686	0	-	138517560	138517560	8553170	4	140,176,124,168,	0,1131,11994,23958,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr5	138553755	138575724	chr5:138553755-138575724	3	-	138556036	138575318	789624	17	2359,141,93,95,118,105,228,210,93,163,107,74,125,182,88,59,487,	0,2696,3018,3646,4113,4797,6108,7824,12870,13245,13699,13893,15169,17204,20007,20312,21482,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr5	138553781	138575416	chr5:138553781-138575416	0	-	138567553	138575318	8553170	16	2333,141,93,95,118,105,228,210,93,163,107,125,182,88,59,179,	0,2670,2992,3620,4087,4771,6082,7798,12844,13219,13673,15143,17178,19981,20286,21456,
#Partially deleted in new
chr5	138555334	138575401	chr5:138555334-138575401	1	-	138556036	138575318	0	17	780,141,93,95,118,105,228,210,93,163,107,74,125,182,88,59,164,	0,1117,1439,2067,2534,3218,4529,6245,11291,11666,12120,12314,13590,15625,18428,18733,19903,
#Partially deleted in new
chr5	138555359	138567010	chr5:138555359-138567010	0	-	138555514	138567010	8553170	3	182,93,10,	0,11266,11641,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	138555826	138557891	chr5:138555826-138557891	0	-	138555826	138555826	8553170	4	288,141,723,23,	0,625,947,2042,
#Partially deleted in new
chr5	138556046	138558631	chr5:138556046-138558631	0	-	138556558	138558631	789624	5	68,122,95,118,79,	0,405,1355,1822,2506,
#Partially deleted in new
chr5	138557341	138575401	chr5:138557341-138575401	0	-	138557341	138557341	8553170	13	155,105,228,210,93,163,107,74,125,182,88,102,164,	0,1211,2522,4238,9284,9659,10113,10307,11583,13618,16421,16726,17896,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	138558337	138561062	chr5:138558337-138561062	0	-	138558337	138558337	8553170	1	2725,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	138558552	138566711	chr5:138558552-138566711	0	-	138560047	138566711	789624	5	105,228,151,210,86,	0,1311,2228,3027,8073,
#Deleted in new
chr5	138558969	138559039	chr5:138558969-138559039	3	-	138558969	138558969	8553170	1	70,	0,
#Partially deleted in new
chr5	138559719	138561789	chr5:138559719-138561789	0	-	138559719	138559719	8553170	2	372,210,	0,1860,
#Deleted in new
chr5	138561042	138561110	chr5:138561042-138561110	3	-	138561042	138561042	789624	1	68,	0,
#Partially deleted in new
chr5	138567000	138575340	chr5:138567000-138575340	0	-	138571076	138575340	789624	8	163,107,74,125,182,74,59,103,	0,454,648,1924,3959,6776,7067,8237,
#Partially deleted in new
chr5	138568924	138575403	chr5:138568924-138575403	0	-	138574121	138575318	789624	5	125,182,88,102,166,	0,2035,4838,5143,6313,
#Partially deleted in new
chr5	138568965	138575401	chr5:138568965-138575401	0	-	138573814	138575318	789624	4	84,182,88,164,	0,1994,4797,6272,
#Partially deleted in new
chr5	138568967	138575166	chr5:138568967-138575166	0	-	138568967	138573783	789624	5	82,182,88,59,173,	0,1992,4795,5100,6026,
#Partially deleted in new
chr5	138570798	138575411	chr5:138570798-138575411	0	-	138570798	138570798	8553170	4	343,88,59,174,	0,2964,3269,4439,
#Partially deleted in new
chr5	138570976	138575009	chr5:138570976-138575009	0	-	138570976	138573783	789624	4	165,88,59,239,	0,2786,3091,3794,
#Partially deleted in new
chr5	138610966	138810089	chr5:138610966-138810089	0	+	138781924	138810089	789624	6	123,59,159,107,196,52,	0,42097,112500,170956,172210,199071,
#Partially deleted in new
chr5	138610977	138810105	chr5:138610977-138810105	0	+	138781924	138810105	789624	5	112,159,107,196,68,	0,112489,170945,172199,199060,
#Deleted in new
chr5	138620328	138620964	chr5:138620328-138620964	7	+	138620328	138620328	16724991	1	636,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	138623478	138623582	chr5:138623478-138623582	3	+	138623478	138623478	8553170	1	104,	0,
#Partially deleted in new
chr5	138663836	138783353	chr5:138663836-138783353	0	+	138781924	138783353	789624	4	40,159,107,177,	0,59630,118086,119340,
#Partially deleted in new
chr5	138744433	138753309	chr5:138744433-138753309	3	-	138744433	138744433	789624	2	329,258,	0,8618,
#Partially deleted in new
chr5	138753096	138810204	chr5:138753096-138810204	0	+	138781924	138810204	789624	4	75,107,196,167,	0,28826,30080,56941,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	138753417	138783374	chr5:138753417-138783374	0	+	138781924	138783374	789624	4	93,470,107,198,	0,1276,28505,29759,
#Partially deleted in new
chr5	138753417	138935033	chr5:138753417-138935033	1	+	138781924	138933823	789624	19	93,107,196,167,120,270,204,81,153,93,157,201,152,111,182,106,135,71,1232,	0,28505,29759,56620,58765,71112,74097,132794,134072,150931,164324,171092,171838,175828,177055,177412,179160,179470,180384,
#Partially deleted in new
chr5	138753420	138934213	chr5:138753420-138934213	0	+	138781924	138810046	789624	17	90,107,167,120,270,204,81,153,93,157,201,152,111,182,106,135,412,	0,28502,56617,58762,71109,74094,132791,134069,150928,164321,171089,171835,175825,177052,177409,179157,180381,
#Partially deleted in new
chr5	138753422	138935034	chr5:138753422-138935034	3	+	138781924	138934089	0	18	88,107,196,167,120,270,204,81,153,93,157,201,152,111,182,106,135,1233,	0,28500,29754,56615,58760,71107,74092,132789,134067,150926,164319,171087,171833,175823,177050,177407,179155,180379,
#Partially deleted in new
chr5	138753430	138824734	chr5:138753430-138824734	0	+	138810045	138824734	789624	4	80,167,120,205,	0,56607,58752,71099,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	138753444	138762098	chr5:138753444-138762098	0	+	138753444	138753444	8553170	2	66,158,	0,8496,
#Partially deleted in new
chr5	138753445	138824629	chr5:138753445-138824629	0	+	138781924	138782352	789624	7	65,107,114,196,167,120,100,	0,28477,28844,29731,56592,58737,71084,
#Partially deleted in new
chr5	138753660	138810155	chr5:138753660-138810155	0	+	138781924	138810155	789624	4	438,107,196,118,	0,28262,29516,56377,
#Partially deleted in new
chr5	138754368	138824588	chr5:138754368-138824588	0	+	138781924	138824588	789624	6	70,107,196,167,120,59,	0,27554,28808,55669,57814,70161,
#Partially deleted in new
chr5	138781922	138934831	chr5:138781922-138934831	1	+	138781924	138933823	789624	18	107,196,167,120,270,204,81,153,93,157,201,152,111,182,106,135,71,1030,	0,1254,28115,30260,42607,45592,104289,105567,122426,135819,142587,143333,147323,148550,148907,150655,150965,151879,
#Partially deleted in new
chr5	138790925	138824692	chr5:138790925-138824692	0	+	138790925	138790925	8553170	4	118,167,120,163,	0,19112,21257,33604,
#Partially deleted in new
chr5	138811958	138824683	chr5:138811958-138824683	0	+	138811958	138811958	8553170	2	344,154,	0,12571,
#Partially deleted in new
chr5	138824676	138887521	chr5:138824676-138887521	0	+	138824676	138881104	789624	5	123,204,96,81,32,	0,2838,56365,61535,62813,
#Partially deleted in new
chr5	138824767	138828232	chr5:138824767-138828232	0	+	138824767	138824767	8553170	2	32,718,	0,2747,
#Partially deleted in new
chr5	138827626	138887732	chr5:138827626-138887732	0	+	138827626	138827626	8553170	3	92,81,243,	0,58585,59863,
#Deleted in new
chr5	138868922	138875290	chr5:138868922-138875290	3	-	138873009	138874911	789624	2	5634,383,	0,5985,
#Partially deleted in new
chr5	138870274	138917818	chr5:138870274-138917818	0	+	138870274	138870274	8553170	5	185,81,153,93,77,	0,15937,17215,34074,47467,
#Deleted in new
chr5	138872454	138875304	chr5:138872454-138875304	1	-	138873009	138874911	789624	2	785,397,	0,2453,
#Deleted in new
chr5	138872631	138875368	chr5:138872631-138875368	1	-	138874015	138874911	789624	2	1497,461,	0,2276,
#Partially deleted in new
chr5	138874037	138904387	chr5:138874037-138904387	0	+	138886259	138904387	789624	5	121,93,81,153,39,	0,7007,12174,13452,30311,
#Deleted in new
chr5	138874045	138875341	chr5:138874045-138875341	0	-	138874045	138874045	8553170	2	64,434,	0,862,
#Partially deleted in new
chr5	138875229	138917779	chr5:138875229-138917779	0	+	138886259	138917779	789624	5	509,81,153,93,38,	0,10982,12260,29119,42512,
#Partially deleted in new
chr5	138875265	138887552	chr5:138875265-138887552	0	+	138886259	138887552	789624	4	473,93,81,63,	0,5779,10946,12224,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	138875398	138881106	chr5:138875398-138881106	0	+	138875398	138875398	8553170	4	340,99,53,65,	0,4791,5282,5643,
#Partially deleted in new
chr5	138875399	138917793	chr5:138875399-138917793	0	+	138886259	138917793	789624	5	198,81,153,93,52,	0,10812,12090,28949,42342,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	138875431	138887566	chr5:138875431-138887566	0	+	138886259	138887566	789624	6	175,75,53,96,81,77,	0,4782,5249,5610,10780,12058,
#Partially deleted in new
chr5	138875432	138917819	chr5:138875432-138917819	0	+	138886259	138917819	789624	5	174,81,153,93,78,	0,10779,12057,28916,42309,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	138875432	138887608	chr5:138875432-138887608	0	+	138886259	138887608	789624	6	165,75,53,96,81,119,	0,4781,5248,5609,10779,12057,
#Partially deleted in new
chr5	138875432	138917847	chr5:138875432-138917847	0	+	138886259	138917847	789624	6	165,96,81,153,93,106,	0,5609,10779,12057,28916,42309,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	138875434	138881138	chr5:138875434-138881138	0	+	138875434	138875434	8553170	4	304,94,53,97,	0,4760,5246,5607,
#Partially deleted in new
chr5	138875436	138887517	chr5:138875436-138887517	0	+	138886259	138887517	789624	5	302,53,96,81,28,	0,5244,5605,10775,12053,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	138875439	138887574	chr5:138875439-138887574	0	+	138886259	138887574	789624	6	167,75,53,93,81,85,	0,4774,5241,5605,10772,12050,
#Partially deleted in new
chr5	138875439	138904375	chr5:138875439-138904375	0	+	138886259	138904375	789624	6	158,53,93,81,153,27,	0,5241,5605,10772,12050,28909,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	138875442	138887578	chr5:138875442-138887578	0	+	138886259	138887578	789624	6	155,94,53,96,81,89,	0,4752,5238,5599,10769,12047,
#Partially deleted in new
chr5	138875463	138904437	chr5:138875463-138904437	0	+	138886259	138904437	789624	5	143,96,81,153,89,	0,5578,10748,12026,28885,
#Partially deleted in new
chr5	138875487	138917854	chr5:138875487-138917854	0	+	138886259	138891191	789624	6	110,81,153,29,93,113,	0,10724,12002,15695,28861,42254,
#Partially deleted in new
chr5	138875652	138935028	chr5:138875652-138935028	1	+	138886259	138934089	0	12	86,81,153,93,157,201,152,111,182,106,135,1227,	0,10559,11837,28696,42089,48857,49603,53593,54820,55177,56925,58149,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	138880194	138887608	chr5:138880194-138887608	0	+	138886259	138887608	789624	4	94,96,81,119,	0,847,6017,7295,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	138886228	138904792	chr5:138886228-138904792	0	+	138886228	138886228	8553170	3	64,153,444,	0,1261,18120,
#Partially deleted in new
chr5	138904398	138930509	chr5:138904398-138930509	0	+	138904398	138924533	789624	5	43,201,152,111,37,	0,20111,20857,24847,26074,
#Partially deleted in new
chr5	138924529	138931074	chr5:138924529-138931074	0	+	138924529	138924529	8553170	5	181,152,111,182,245,	0,726,4716,5943,6300,
#Deleted in new
chr5	138924588	138925491	chr5:138924588-138925491	0	+	138924588	138924588	8553170	2	122,236,	0,667,
#Partially deleted in new
chr5	138930637	138934162	chr5:138930637-138934162	0	+	138930637	138934089	789624	3	17,106,361,	0,192,3164,
#Partially deleted in new
chr5	138931900	138935033	chr5:138931900-138935033	0	+	138931900	138931900	8553170	2	812,1232,	0,1901,
#Partially deleted in new
chr5	138946719	139198398	chr5:138946719-139198398	3	-	138947116	139127843	789624	10	754,165,97,122,192,100,109,139,115,130,	0,4451,5068,74451,80081,95900,104218,174315,181019,251549,
#Partially deleted in new
chr5	138946753	139198316	chr5:138946753-139198316	1	-	138947116	139127843	789624	11	720,165,97,122,192,100,109,139,115,88,48,	0,4417,5034,74417,80047,95866,104184,174281,180985,249687,251515,
#Partially deleted in new
chr5	138946994	138953433	chr5:138946994-138953433	0	-	138946994	138946994	8553170	4	479,165,97,102,	0,4176,4793,6337,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	138947022	139196521	chr5:138947022-139196521	1	-	138947116	139137342	789624	11	451,165,97,122,192,100,109,136,115,146,81,	0,4148,4765,74148,79778,95597,103915,174012,180716,190306,249418,
#Partially deleted in new
chr5	138951788	139093881	chr5:138951788-139093881	0	-	138951788	138951788	8553170	6	96,122,192,100,109,71,	0,69382,75012,90831,99149,142022,
#Partially deleted in new
chr5	138951819	139042682	chr5:138951819-139042682	0	-	138951819	139042682	789624	3	65,122,63,	0,69351,90800,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	139012328	139012441	chr5:139012328-139012441	3	+	139012328	139012328	8553170	1	113,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	139012328	139012441	chr5:139012328-139012441	7	+	139012328	139012328	16724991	1	113,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	139012646	139013688	chr5:139012646-139013688	1	+	139012646	139012646	8553170	2	140,108,	0,934,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	139012649	139014224	chr5:139012649-139014224	1	+	139012649	139012649	8553170	2	137,666,	0,909,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	139012649	139022608	chr5:139012649-139022608	1	+	139012649	139012649	8553170	3	137,152,778,	0,8473,9181,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	139012649	139051203	chr5:139012649-139051203	3	+	139012649	139012649	8553170	5	87,358,38,46,202,	0,4222,20244,21747,38352,
#Partially deleted in new
chr5	139026956	139198306	chr5:139026956-139198306	0	-	139026956	139127843	789624	7	36,100,109,139,115,138,38,	0,15663,23981,94078,100782,106377,171312,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	139035147	139035987	chr5:139035147-139035987	7	-	139035147	139035147	16724991	3	415,49,54,	0,447,786,
#Partially deleted in new
chr5	139042702	139131758	chr5:139042702-139131758	0	-	139042702	139127843	789624	5	17,109,139,115,192,	0,8235,78332,85036,88864,
#Partially deleted in new
chr5	139050945	139198297	chr5:139050945-139198297	0	-	139050945	139127963	789624	6	101,139,115,109,88,29,	0,70089,76793,76998,145495,147323,
#Partially deleted in new
chr5	139050949	139198304	chr5:139050949-139198304	0	-	139050949	139127963	789624	5	97,139,115,109,36,	0,70085,76789,76994,147319,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	139051006	139155467	chr5:139051006-139155467	0	-	139051006	139127843	789624	4	40,139,115,148,	0,70028,76732,104313,
#Partially deleted in new
chr5	139108006	139196528	chr5:139108006-139196528	0	-	139108006	139108006	8553170	4	205,139,115,88,	0,13028,19732,88434,
#Partially deleted in new
chr5	139121034	139293534	chr5:139121034-139293534	0	-	139121034	139121034	8553170	5	139,115,118,63,112,	0,6704,159533,164213,172388,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	139187750	139198308	chr5:139187750-139198308	0	-	139187750	139187750	8553170	3	307,88,40,	0,8690,10518,
#Deleted in new
chr5	139221757	139221837	chr5:139221757-139221837	3	+	139221757	139221757	8553170	1	80,	0,
#Partially deleted in new
chr5	139273537	139293557	chr5:139273537-139293557	0	-	139273537	139273537	8553170	4	117,118,63,284,	0,7030,11710,19736,
#Partially deleted in new
chr5	139273751	139329404	chr5:139273751-139329404	1	+	139307415	139329395	789624	17	410,30,79,1089,62,42,113,53,126,126,168,132,44,370,223,122,60,	0,2369,5299,33487,40923,41945,42324,43301,43844,45156,45582,48146,48711,48846,51688,52411,55593,
#Partially deleted in new
chr5	139273788	139316148	chr5:139273788-139316148	0	+	139315736	139316148	789624	5	373,30,62,42,73,	0,2332,40886,41908,42287,
#Partially deleted in new
chr5	139273837	139316093	chr5:139273837-139316093	0	+	139315736	139316093	8553170	6	328,30,82,79,42,18,	0,2283,4489,5213,41859,42238,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	139274101	139279839	chr5:139274101-139279839	2	+	139274101	139274101	8553170	5	60,30,82,79,291,	0,2019,4225,4949,5447,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	139274101	139280947	chr5:139274101-139280947	1	+	139274101	139274101	8553170	5	60,30,82,79,1013,	0,2019,4225,4949,5833,
#Partially deleted in new
chr5	139274102	139330394	chr5:139274102-139330394	1	+	139307415	139329395	789624	18	59,30,82,79,1089,62,42,113,53,126,126,168,132,44,370,223,122,1050,	0,2018,4224,4948,33136,40572,41594,41973,42950,43493,44805,45231,47795,48360,48495,51337,52060,55242,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	139274102	139282989	chr5:139274102-139282989	1	+	139274102	139274102	8553170	7	59,30,82,176,79,124,251,	0,2018,4224,4462,4948,5832,8636,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	139274102	139279388	chr5:139274102-139279388	0	+	139274102	139274102	8553170	5	59,66,30,82,338,	0,261,2018,4224,4948,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr5	139274103	139331671	chr5:139274103-139331671	1	+	139307415	139329395	789624	19	58,30,82,79,123,1089,62,42,113,53,126,126,168,132,44,370,367,122,2327,	0,2017,4223,4947,19349,33135,40571,41593,41972,42949,43492,44804,45230,47794,48359,48494,51192,52059,55241,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr5	139274103	139330428	chr5:139274103-139330428	3	+	139307415	139329395	789624	20	58,30,82,79,103,123,1089,62,42,113,53,126,126,168,132,44,370,367,122,1084,	0,2017,4223,4947,17868,19349,33135,40571,41593,41972,42949,43492,44804,45230,47794,48359,48494,51192,52059,55241,
#Partially deleted in new
chr5	139274103	139329757	chr5:139274103-139329757	1	+	139315736	139329395	789624	17	58,30,82,79,62,42,113,53,126,126,168,132,44,370,223,122,413,	0,2017,4223,4947,40571,41593,41972,42949,43492,44804,45230,47794,48359,48494,51336,52059,55241,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	139274103	139280059	chr5:139274103-139280059	1	+	139274103	139274103	8553170	6	62,66,30,82,79,125,	0,260,2017,4223,4947,5831,
#Partially deleted in new
chr5	139274103	139307737	chr5:139274103-139307737	0	+	139307415	139307737	789624	3	58,30,499,	0,2017,33135,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	139274117	139283244	chr5:139274117-139283244	0	+	139274117	139274117	8553170	6	44,30,82,79,124,506,	0,2003,4209,4933,5817,8621,
#Partially deleted in new
chr5	139274123	139317670	chr5:139274123-139317670	0	+	139315736	139317670	789624	10	38,30,82,176,79,62,42,113,53,75,	0,1997,4203,4441,4927,40551,41573,41952,42929,43472,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	139274130	139307556	chr5:139274130-139307556	0	+	139307415	139307556	789624	6	31,30,82,79,124,318,	0,1990,4196,4920,5804,33108,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	139274130	139284899	chr5:139274130-139284899	1	+	139274130	139274130	8553170	5	31,30,82,79,2161,	0,1990,4196,4920,8608,
#Partially deleted in new
chr5	139274130	139279129	chr5:139274130-139279129	0	+	139274130	139274130	8553170	4	31,30,170,79,	0,1990,4196,4920,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	139274130	139279586	chr5:139274130-139279586	0	+	139274130	139274130	789624	4	31,30,82,536,	0,1990,4196,4920,
#Partially deleted in new
chr5	139276108	139307714	chr5:139276108-139307714	0	+	139307415	139307714	789624	3	42,71,476,	0,7422,31130,
#Deleted in new
chr5	139276179	139276320	chr5:139276179-139276320	3	+	139276179	139276179	789624	1	141,	0,
#Deleted in new
chr5	139278780	139278978	chr5:139278780-139278978	3	+	139278780	139278780	789624	1	198,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr5	139293647	139331359	chr5:139293647-139331359	3	+	139307415	139329395	789624	15	158,1089,62,42,113,53,126,126,168,132,44,370,223,122,2015,	0,13591,21027,22049,22428,23405,23948,25260,25686,28250,28815,28950,31792,32515,35697,
#Partially deleted in new
chr5	139293673	139318987	chr5:139293673-139318987	0	+	139315736	139318987	789624	7	99,62,42,113,53,126,80,	0,21001,22023,22402,23379,23922,25234,
#Partially deleted in new
chr5	139293679	139317685	chr5:139293679-139317685	0	+	139314734	139317685	789624	5	126,62,113,53,90,	0,20995,22396,23373,23916,
#Partially deleted in new
chr5	139293715	139315157	chr5:139293715-139315157	0	+	139293715	139293715	8553170	2	90,483,	0,20959,
#Partially deleted in new
chr5	139293717	139317713	chr5:139293717-139317713	0	+	139307415	139317713	789624	7	55,1087,62,42,113,53,118,	0,13523,20957,21979,22358,23335,23878,
#Partially deleted in new
chr5	139293718	139318942	chr5:139293718-139318942	0	+	139315736	139318942	789624	6	54,42,113,53,126,35,	0,21978,22357,23334,23877,25189,
#Partially deleted in new
chr5	139293721	139330405	chr5:139293721-139330405	1	+	139315736	139329395	789624	13	84,42,113,53,126,126,168,132,44,370,223,122,1061,	0,21975,22354,23331,23874,25186,25612,28176,28741,28876,31718,32441,35623,
#Partially deleted in new
chr5	139293729	139329760	chr5:139293729-139329760	1	+	139307415	139329358	789624	14	76,1089,62,42,113,53,126,126,168,132,44,370,223,416,	0,13509,20945,21967,22346,23323,23866,25178,25604,28168,28733,28868,31710,35615,
#Partially deleted in new
chr5	139293736	139319470	chr5:139293736-139319470	0	+	139317619	139319470	789624	4	69,115,126,137,	0,23870,25171,25597,
#Partially deleted in new
chr5	139293741	139315214	chr5:139293741-139315214	0	+	139293741	139293741	8553170	2	31,540,	0,20933,
#Partially deleted in new
chr5	139293742	139321994	chr5:139293742-139321994	0	+	139293742	139293742	8553170	5	63,62,42,113,97,	0,20932,21954,22333,28155,
#Partially deleted in new
chr5	139293749	139330002	chr5:139293749-139330002	1	+	139293980	139329395	789624	14	279,62,42,113,53,126,126,168,132,44,370,223,122,658,	0,20925,21947,22326,23303,23846,25158,25584,28148,28713,28848,31690,32413,35595,
#Partially deleted in new
chr5	139293749	139322029	chr5:139293749-139322029	0	+	139293749	139293749	8553170	6	56,62,42,113,168,132,	0,20925,21947,22326,25584,28148,
#Partially deleted in new
chr5	139293777	139330441	chr5:139293777-139330441	1	+	139307415	139329395	789624	15	251,1089,62,42,113,53,126,126,168,132,44,370,223,122,1097,	0,13461,20897,21919,22298,23275,23818,25130,25556,28120,28685,28820,31662,32385,35567,
#Partially deleted in new
chr5	139293951	139307650	chr5:139293951-139307650	0	+	139307415	139307650	789624	2	149,412,	0,13287,
#Partially deleted in new
chr5	139293964	139317721	chr5:139293964-139317721	0	+	139293980	139317721	789624	6	136,62,42,113,53,126,	0,20710,21732,22111,23088,23631,
#Partially deleted in new
chr5	139293982	139322948	chr5:139293982-139322948	0	+	139293982	139293982	8553170	9	46,1514,53,126,126,168,132,44,351,	0,20692,23070,23613,24925,25351,27915,28480,28615,
#Partially deleted in new
chr5	139294529	139307715	chr5:139294529-139307715	0	+	139307415	139307715	789624	2	87,477,	0,12709,
#Partially deleted in new
chr5	139294585	139307677	chr5:139294585-139307677	0	+	139307415	139307677	789624	2	257,439,	0,12653,
#Partially deleted in new
chr5	139294637	139307648	chr5:139294637-139307648	0	+	139307415	139307648	789624	2	360,410,	0,12601,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	139299851	139299968	chr5:139299851-139299968	7	+	139299851	139299851	16724991	1	117,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	139307415	139331677	chr5:139307415-139331677	1	+	139307415	139329395	789624	5	113,199,367,122,2333,	0,15353,17880,18747,21929,
#Partially deleted in new
chr5	139308094	139322017	chr5:139308094-139322017	0	+	139308094	139322017	789624	8	233,62,113,53,126,126,168,120,	0,6580,7981,8958,9501,10813,11239,13803,
#Partially deleted in new
chr5	139308242	139315145	chr5:139308242-139315145	0	+	139308242	139308242	8553170	2	85,471,	0,6432,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	139310042	139330437	chr5:139310042-139330437	0	+	139310042	139310042	8553170	13	4694,42,113,53,126,126,168,132,44,370,223,122,1093,	0,5654,6033,7010,7553,8865,9291,11855,12420,12555,15397,16120,19302,
#Partially deleted in new
chr5	139315346	139317105	chr5:139315346-139317105	0	+	139315346	139315346	8553170	3	392,113,53,	0,729,1706,
#Partially deleted in new
chr5	139315750	139329648	chr5:139315750-139329648	0	+	139315750	139315750	8553170	11	438,53,126,126,168,132,44,370,367,122,304,	0,1302,1845,3157,3583,6147,6712,6847,9545,10412,13594,
#Partially deleted in new
chr5	139321804	139322690	chr5:139321804-139322690	0	+	139321804	139321804	8553170	3	225,44,93,	0,658,793,
#Partially deleted in new
chr5	139322745	139326255	chr5:139322745-139326255	0	+	139322745	139322745	8553170	3	222,327,93,	0,2590,3417,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	139333037	139333365	chr5:139333037-139333365	3	-	139333037	139333037	8553170	1	328,	0,
#Partially deleted in new
chr5	139341586	139364704	chr5:139341586-139364704	0	+	139363784	139364704	789624	4	394,77,164,141,	0,1743,22172,22977,
#Partially deleted in new
chr5	139341831	139369698	chr5:139341831-139369698	3	+	139363784	139368798	0	4	149,164,180,966,	0,21927,22732,26901,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	139341856	139365090	chr5:139341856-139365090	0	+	139341856	139341856	8553170	3	124,164,527,	0,21902,22707,
#Partially deleted in new
chr5	139341861	139368798	chr5:139341861-139368798	0	+	139341861	139341861	8553170	3	119,180,66,	0,22702,26871,
#Partially deleted in new
chr5	139341877	139368933	chr5:139341877-139368933	1	+	139363784	139368798	789624	3	103,164,201,	0,21881,26855,
#Partially deleted in new
chr5	139341918	139364042	chr5:139341918-139364042	0	+	139341918	139341918	8553170	3	62,77,284,	0,1411,21840,
#Partially deleted in new
chr5	139342441	139369720	chr5:139342441-139369720	1	+	139363784	139368798	0	4	965,164,180,988,	0,21317,22122,26291,
#Partially deleted in new
chr5	139342450	139369080	chr5:139342450-139369080	1	+	139363784	139368798	0	4	166,164,180,348,	0,21308,22113,26282,
#Partially deleted in new
chr5	139364676	139369717	chr5:139364676-139369717	3	-	139364676	139364676	8553170	2	28,636,	0,4405,
#Partially deleted in new
chr5	139367195	139383300	chr5:139367195-139383300	1	-	139372005	139383253	789624	15	436,267,96,144,130,106,148,157,121,182,68,89,158,114,83,	0,4791,10206,10779,11026,11383,12011,12482,12760,13012,13369,13602,14696,15296,16022,
#Partially deleted in new
chr5	139367195	139383292	chr5:139367195-139383292	3	-	139372005	139383253	789624	15	436,267,96,144,130,106,148,157,121,182,80,89,158,114,75,	0,4791,10206,10779,11026,11383,12011,12482,12760,13012,13357,13602,14696,15296,16022,
#Deleted in new
chr5	139378590	139380607	chr5:139378590-139380607	0	-	139378590	139380607	789624	4	94,148,121,43,	0,616,1365,1974,
#Deleted in new
chr5	139379330	139380213	chr5:139379330-139380213	0	-	139379330	139379330	8553170	2	24,536,	0,347,
#Partially deleted in new
chr5	139380597	139383301	chr5:139380597-139383301	0	-	139380597	139380597	8553170	5	114,89,158,114,84,	0,200,1294,1894,2620,
#Partially deleted in new
chr5	139380825	139382413	chr5:139380825-139382413	0	-	139380825	139380825	8553170	2	61,522,	0,1066,
#Deleted in new
chr5	139381912	139384553	chr5:139381912-139384553	0	-	139381912	139384553	789624	4	137,114,62,196,	0,579,1305,2445,
#Partially deleted in new
chr5	139387479	139390081	chr5:139387479-139390081	0	-	139388077	139389856	789624	4	442,111,141,402,	0,541,981,2200,
#Partially deleted in new
chr5	139387485	139389913	chr5:139387485-139389913	0	-	139388616	139389856	789624	4	436,111,207,234,	0,535,975,2194,
#Partially deleted in new
chr5	139387567	139389914	chr5:139387567-139389914	3	-	139387764	139389856	789624	4	354,111,125,235,	0,453,893,2112,
#Partially deleted in new
chr5	139387567	139389895	chr5:139387567-139389895	0	-	139388077	139389856	789624	3	354,111,216,	0,453,2112,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	139387568	139389883	chr5:139387568-139389883	0	-	139387568	139387568	8553170	3	353,111,1423,	0,452,892,
#Deleted in new
chr5	139387594	139388762	chr5:139387594-139388762	0	-	139387594	139387594	8553170	2	537,302,	0,866,
#Partially deleted in new
chr5	139387784	139389848	chr5:139387784-139389848	0	-	139389408	139389848	789624	5	137,111,125,94,169,	0,236,676,1542,1895,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	139388595	139389914	chr5:139388595-139389914	0	-	139388595	139388595	8553170	2	825,235,	0,1084,
#Deleted in new
chr5	139390591	139395713	chr5:139390591-139395713	3	-	139392033	139395081	789624	1	5122,	0,
#Partially deleted in new
chr5	139396562	139404088	chr5:139396562-139404088	2	-	139396562	139404060	789624	6	393,103,71,131,66,145,	0,478,5192,5352,6065,7381,
#Partially deleted in new
chr5	139396766	139404068	chr5:139396766-139404068	0	-	139396799	139404060	789624	6	163,103,71,131,66,125,	0,274,4988,5148,5861,7177,
#Partially deleted in new
chr5	139396777	139402663	chr5:139396777-139402663	0	-	139396799	139402663	789624	5	152,103,62,131,36,	0,263,4977,5137,5850,
#Partially deleted in new
chr5	139396853	139404050	chr5:139396853-139404050	0	-	139396853	139404050	789624	5	76,71,131,66,107,	0,4901,5061,5774,7090,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	139401459	139404087	chr5:139401459-139404087	1	-	139401572	139404060	789624	3	366,131,144,	0,455,2484,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	139401500	139404067	chr5:139401500-139404067	1	-	139401572	139404060	789624	4	325,131,66,124,	0,414,1127,2443,
#Partially deleted in new
chr5	139401524	139404060	chr5:139401524-139404060	1	-	139401572	139404060	789624	4	292,131,66,117,	0,390,1103,2419,
#Partially deleted in new
chr5	139408587	139414239	chr5:139408587-139414239	0	-	139414147	139414239	789624	2	275,176,	0,5476,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	139410202	139439526	chr5:139410202-139439526	3	-	139414147	139439445	789624	8	4070,173,110,110,186,146,187,121,	0,9850,12505,14802,15969,18335,27169,29203,
#Partially deleted in new
chr5	139414054	139420310	chr5:139414054-139420310	0	-	139414054	139414054	8553170	2	218,258,	0,5998,
#Partially deleted in new
chr5	139414186	139426229	chr5:139414186-139426229	0	-	139418750	139426229	789624	6	86,115,173,110,110,58,	0,4532,5866,8521,10818,11985,
#Partially deleted in new
chr5	139419067	139425048	chr5:139419067-139425048	0	-	139419134	139425048	789624	4	105,173,110,44,	0,985,3640,5937,
#Partially deleted in new
chr5	139420201	139437560	chr5:139420201-139437560	0	-	139420201	139420201	8553170	5	24,110,186,146,189,	0,4803,5970,8336,17170,
#Partially deleted in new
chr5	139422784	139439501	chr5:139422784-139439501	0	-	139428588	139439445	789624	5	33,110,186,146,96,	0,2220,3387,5753,16621,
#Partially deleted in new
chr5	139425004	139439459	chr5:139425004-139439459	0	-	139426320	139439445	789624	4	110,186,187,54,	0,1167,12367,14401,
#Partially deleted in new
chr5	139426186	139444482	chr5:139426186-139444482	0	-	139426186	139439445	789624	7	171,146,187,87,198,83,174,	0,2351,11185,13219,16100,17498,18122,
#Partially deleted in new
chr5	139426211	139444491	chr5:139426211-139444491	0	-	139426211	139439445	789624	6	146,146,187,87,83,183,	0,2326,11160,13194,17473,18097,
#Partially deleted in new
chr5	139437522	139444479	chr5:139437522-139444479	0	-	139437522	139439445	789624	5	36,87,198,87,171,	0,1883,4764,6158,6786,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	139440678	139444451	chr5:139440678-139444451	0	-	139440678	139440678	8553170	4	346,198,83,143,	0,1608,3006,3630,
#Partially deleted in new
chr5	139442315	139462707	chr5:139442315-139462707	3	-	139448899	139462670	8553170	12	169,83,104,97,37,99,114,45,60,51,45,98,	0,1369,6489,6762,12286,12509,13007,14158,15229,15441,15823,20294,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	139447906	139448017	chr5:139447906-139448017	3	+	139447906	139447906	8553170	1	111,	0,
#Partially deleted in new
chr5	139448555	139462743	chr5:139448555-139462743	3	-	139448899	139462670	789624	10	353,97,37,99,114,45,60,51,45,134,	0,522,6046,6269,6767,7918,8989,9201,9583,14054,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	139470777	139474772	chr5:139470777-139474772	3	+	139471121	139472921	789624	2	353,2241,	0,1754,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	139475533	139482698	chr5:139475533-139482698	0	-	139475533	139475533	8553170	6	921,187,935,915,93,149,	0,1795,2736,5256,6676,7016,
#Partially deleted in new
chr5	139475963	139482790	chr5:139475963-139482790	3	-	139476260	139481704	0	8	491,187,239,109,184,227,93,241,	0,1365,2306,4826,5195,5514,6246,6586,
#Partially deleted in new
chr5	139476025	139481368	chr5:139476025-139481368	0	-	139476025	139476025	8553170	4	429,239,109,210,	0,2244,4764,5133,
#Partially deleted in new
chr5	139476300	139481629	chr5:139476300-139481629	0	-	139476300	139476300	8553170	5	154,239,109,184,152,	0,1969,4489,4858,5177,
#Partially deleted in new
chr5	139476344	139481461	chr5:139476344-139481461	0	-	139476344	139476344	8553170	5	110,187,239,109,303,	0,984,1925,4445,4814,
#Partially deleted in new
chr5	139477454	139482689	chr5:139477454-139482689	0	-	139477454	139477454	8553170	6	61,239,109,184,93,140,	0,815,3335,3704,4755,5095,
#Partially deleted in new
chr5	139477482	139481087	chr5:139477482-139481087	0	-	139477482	139477482	8553170	3	33,239,298,	0,787,3307,
#Partially deleted in new
chr5	139478269	139482351	chr5:139478269-139482351	0	-	139478269	139481704	789624	5	239,109,184,227,142,	0,2520,2889,3208,3940,
#Partially deleted in new
chr5	139478351	139482758	chr5:139478351-139482758	0	-	139478351	139478351	8553170	5	157,109,546,93,209,	0,2438,2807,3858,4198,
#Partially deleted in new
chr5	139478367	139482310	chr5:139478367-139482310	0	-	139478367	139478367	8553170	5	141,81,157,227,101,	0,2422,2818,3110,3842,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	139478461	139482296	chr5:139478461-139482296	0	-	139478461	139478461	8553170	5	47,101,109,546,87,	0,642,2328,2697,3748,
#Partially deleted in new
chr5	139479169	139481349	chr5:139479169-139481349	0	-	139479169	139479169	8553170	2	35,560,	0,1620,
#Partially deleted in new
chr5	139481245	139482310	chr5:139481245-139482310	0	-	139481245	139481245	8553170	2	459,101,	0,964,
#Partially deleted in new
chr5	139481418	139482935	chr5:139481418-139482935	0	-	139481418	139481418	8553170	3	286,93,326,	0,791,1191,
#Partially deleted in new
chr5	139481845	139482720	chr5:139481845-139482720	0	-	139481845	139481845	8553170	2	457,171,	0,704,
#Deleted in new
chr5	139492537	139493105	chr5:139492537-139493105	7	+	139492537	139492537	16724991	1	568,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	139494255	139496116	chr5:139494255-139496116	7	+	139494255	139494255	16724991	1	1861,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	139554899	139555001	chr5:139554899-139555001	3	-	139554899	139554899	8553170	1	102,	0,
#Partially deleted in new
chr5	139561165	139628433	chr5:139561165-139628433	3	+	139561791	139626801	0	7	650,64,32,78,106,94,1678,	0,39206,53420,53531,53695,62202,65590,
#Partially deleted in new
chr5	139561166	139623444	chr5:139561166-139623444	0	+	139600434	139623444	789624	7	649,164,64,32,78,106,77,	0,1077,39205,53419,53530,53694,62201,
#Partially deleted in new
chr5	139561723	139614685	chr5:139561723-139614685	0	+	139561723	139561723	8553170	3	92,64,100,	0,38648,52862,
#Partially deleted in new
chr5	139561725	139627686	chr5:139561725-139627686	0	+	139561791	139626801	0	8	90,64,32,78,106,94,302,135,	0,38646,52860,52971,53135,61642,65030,65826,
#Partially deleted in new
chr5	139562028	139627115	chr5:139562028-139627115	1	+	139600434	139626801	0	7	379,64,32,78,106,94,360,	0,38343,52557,52668,52832,61339,64727,
#Partially deleted in new
chr5	139600403	139623662	chr5:139600403-139623662	0	+	139600403	139600403	8553170	5	32,32,78,106,295,	0,14182,14293,14457,22964,
#Partially deleted in new
chr5	139612001	139612363	chr5:139612001-139612363	7	-	139612001	139612001	16724991	1	362,	0,
#Deleted in new
chr5	139644459	139645002	chr5:139644459-139645002	3	-	139644459	139644459	8553170	1	543,	0,
#Partially deleted in new
chr5	139647298	139680729	chr5:139647298-139680729	0	+	139680523	139680729	789624	2	137,366,	0,33065,
#Partially deleted in new
chr5	139647903	139680830	chr5:139647903-139680830	0	+	139680523	139680830	789624	2	101,467,	0,32460,
#Partially deleted in new
chr5	139648291	139683882	chr5:139648291-139683882	3	+	139680523	139682907	0	3	554,1084,1020,	0,32072,34571,
#Partially deleted in new
chr5	139648711	139681006	chr5:139648711-139681006	0	+	139680523	139681006	789624	2	134,643,	0,31652,
#Partially deleted in new
chr5	139648928	139680936	chr5:139648928-139680936	0	+	139680523	139680936	789624	3	81,224,573,	0,16651,31435,
#Partially deleted in new
chr5	139648932	139683593	chr5:139648932-139683593	1	+	139680523	139682907	0	3	77,1084,731,	0,31431,33930,
#Deleted in new
chr5	139648998	139649728	chr5:139648998-139649728	3	-	139648998	139648998	789624	2	183,394,	0,336,
#Partially deleted in new
chr5	139650988	139680743	chr5:139650988-139680743	0	+	139680523	139680743	789624	2	178,380,	0,29375,
#Partially deleted in new
chr5	139659554	139680818	chr5:139659554-139680818	0	+	139680523	139680818	789624	2	87,455,	0,20809,
#Partially deleted in new
chr5	139675442	139680773	chr5:139675442-139680773	0	+	139680523	139680773	789624	2	96,410,	0,4921,
#Partially deleted in new
chr5	139675473	139681113	chr5:139675473-139681113	0	+	139680523	139681113	789624	2	60,750,	0,4890,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	139679682	139680547	chr5:139679682-139680547	0	+	139680523	139680547	789624	2	258,184,	0,681,
#Deleted in new
chr5	139680957	139683111	chr5:139680957-139683111	0	+	139680957	139680957	8553170	2	511,249,	0,1905,
#Deleted in new
chr5	139682993	139683578	chr5:139682993-139683578	0	+	139682993	139682993	8553170	2	160,193,	0,392,
#Deleted in new
chr5	139717984	139718090	chr5:139717984-139718090	3	-	139717984	139717984	8553170	1	106,	0,
#Partially deleted in new
chr5	139741348	139746223	chr5:139741348-139746223	3	-	139741348	139741348	789624	3	292,90,30,	0,3821,4845,
#Partially deleted in new
chr5	139772527	139775406	chr5:139772527-139775406	3	-	139772527	139772527	8553170	2	427,126,	0,2753,
#Deleted in new
chr5	139775304	139775472	chr5:139775304-139775472	3	+	139775304	139775304	8553170	1	168,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr5	139795820	139844466	chr5:139795820-139844466	3	+	139809440	139842474	789624	15	155,421,450,195,81,113,59,90,44,191,71,158,145,144,2196,	0,13570,17488,18349,21660,26072,26905,37881,39902,40990,41347,41804,42807,44206,46450,
#Partially deleted in new
chr5	139846778	140043299	chr5:139846778-140043299	1	-	139847916	140043069	789624	8	1919,228,128,124,103,119,172,930,	0,4825,5653,6125,8897,34077,40561,195591,
#Partially deleted in new
chr5	139847648	140043147	chr5:139847648-140043147	1	-	139847916	140043069	789624	11	1049,228,128,124,103,24,77,121,119,172,778,	0,3955,4783,5255,8027,12240,17900,24072,33207,39691,194721,
#Partially deleted in new
chr5	139847674	140043294	chr5:139847674-140043294	1	-	139847916	140043069	789624	10	1023,228,128,124,103,77,121,119,172,925,	0,3929,4757,5229,8001,17874,24046,33181,39665,194695,
#Partially deleted in new
chr5	139847916	140043069	chr5:139847916-140043069	1	-	139847916	140043069	789624	10	781,228,128,124,103,59,121,119,172,700,	0,3687,4515,4987,7759,17198,23804,32939,39423,194453,
#Partially deleted in new
chr5	139847916	139904397	chr5:139847916-139904397	1	-	139847916	139904397	789624	10	781,228,128,124,103,77,121,119,172,91,	0,3687,4515,4987,7759,17632,23804,32939,39423,56390,
#Partially deleted in new
chr5	139847916	140043069	chr5:139847916-140043069	3	-	139847916	140043069	789624	11	781,228,128,124,103,24,59,121,119,172,700,	0,3687,4515,4987,7759,11972,17198,23804,32939,39423,194453,
#Partially deleted in new
chr5	139848289	139856389	chr5:139848289-139856389	3	+	139848289	139848289	8553170	3	143,99,227,	0,7398,7873,
#Partially deleted in new
chr5	139851752	140043069	chr5:139851752-140043069	0	-	139855745	140043069	789624	10	79,128,124,103,59,77,121,119,172,700,	0,679,1151,3923,13362,13796,19968,29103,35587,190617,
#Deleted in new
chr5	139869398	139871803	chr5:139869398-139871803	0	-	139869398	139869398	8553170	3	320,105,83,	0,1645,2322,
#Partially deleted in new
chr5	139869537	139904310	chr5:139869537-139904310	0	-	139869537	139869537	8553170	5	181,121,119,172,4,	0,2183,11318,17802,34769,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	140019491	140019592	chr5:140019491-140019592	3	+	140019491	140019491	8553170	1	101,	0,
#Partially deleted in new
chr5	140072856	140108630	chr5:140072856-140108630	0	-	140072856	140072856	8553170	3	221,176,158,	0,32730,35616,
#Deleted in new
chr5	140102921	140107643	chr5:140102921-140107643	3	-	140102921	140102921	789624	3	1245,176,1348,	0,2665,3374,
#Deleted in new
chr5	140103832	140107466	chr5:140103832-140107466	1	-	140103832	140103832	8553170	4	334,176,166,368,	0,1754,2463,3266,
#Deleted in new
chr5	140103839	140107649	chr5:140103839-140107649	1	-	140103839	140103839	8553170	4	327,176,195,241,	0,1747,2456,3569,
#Deleted in new
chr5	140105301	140106482	chr5:140105301-140106482	0	-	140105301	140105301	8553170	2	461,187,	0,994,
#Deleted in new
chr5	140105424	140108588	chr5:140105424-140108588	0	-	140105424	140105424	8553170	2	338,116,	0,3048,
#Deleted in new
chr5	140105599	140108565	chr5:140105599-140108565	0	-	140105599	140105599	8553170	3	163,195,93,	0,696,2873,
#Deleted in new
chr5	140107776	140114313	chr5:140107776-140114313	0	+	140107776	140107776	8553170	2	324,273,	0,6264,
#Deleted in new
chr5	140112927	140114260	chr5:140112927-140114260	0	+	140112927	140112927	8553170	2	282,220,	0,1113,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	140114122	140125619	chr5:140114122-140125619	3	+	140114181	140115150	789624	1	11497,	0,
#Deleted in new
chr5	140125934	140129392	chr5:140125934-140129392	3	+	140128476	140128638	789624	1	3458,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	140157318	140168785	chr5:140157318-140168785	3	+	140157318	140157318	789624	5	40,163,109,122,149,	0,7331,10046,10362,11318,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	140161952	140173051	chr5:140161952-140173051	0	+	140161952	140161952	8553170	3	5525,122,304,	0,5728,10795,
#Partially deleted in new
chr5	140174641	140243789	chr5:140174641-140243789	3	+	140194465	140243411	789624	3	644,207,485,	0,19804,68663,
#Partially deleted in new
chr5	140175155	140244810	chr5:140175155-140244810	0	+	140175155	140175155	8553170	4	130,207,159,169,	0,19290,68149,69486,
#Partially deleted in new
chr5	140175187	140265830	chr5:140175187-140265830	0	+	140175187	140175187	8553170	4	98,207,159,124,	0,19258,68117,90519,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	140175187	140282052	chr5:140175187-140282052	0	+	140175187	140175187	8553170	3	98,159,556,	0,68117,106309,
#Partially deleted in new
chr5	140175216	140228915	chr5:140175216-140228915	1	+	140194465	140228836	789624	3	69,207,186,	0,19229,53513,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	140200162	140203187	chr5:140200162-140203187	3	+	140200162	140200162	8553170	1	3025,	0,
#Partially deleted in new
chr5	140245038	140303121	chr5:140245038-140303121	3	-	140245973	140303073	789624	4	1019,85,167,81,	0,36410,55377,58002,
#Partially deleted in new
chr5	140245086	140300583	chr5:140245086-140300583	0	-	140245086	140245086	8553170	2	971,168,	0,55329,
#Partially deleted in new
chr5	140245124	140303113	chr5:140245124-140303113	1	-	140281458	140303073	789624	3	933,85,73,	0,36324,57916,
#Partially deleted in new
chr5	140245346	140281535	chr5:140245346-140281535	0	-	140245346	140245346	8553170	2	711,87,	0,36102,
#Partially deleted in new
chr5	140245447	140303083	chr5:140245447-140303083	1	-	140245478	140303073	789624	5	93,3,89,167,43,	0,17081,35997,54968,57593,
#Partially deleted in new
chr5	140245551	140293207	chr5:140245551-140293207	0	-	140245551	140245551	8553170	3	506,85,309,	0,35897,47347,
#Partially deleted in new
chr5	140280959	140303086	chr5:140280959-140303086	0	-	140280959	140280959	8553170	3	574,167,46,	0,19456,22081,
#Partially deleted in new
chr5	140332842	140346631	chr5:140332842-140346631	3	-	140334675	140346328	0	6	1438,91,156,178,174,349,	0,1815,3029,9792,13068,13440,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	140333523	140335130	chr5:140333523-140335130	0	-	140333523	140333523	8553170	2	757,473,	0,1134,
#Partially deleted in new
chr5	140335890	140343062	chr5:140335890-140343062	0	-	140335890	140335890	8553170	2	137,428,	0,6744,
#Partially deleted in new
chr5	140348483	140357794	chr5:140348483-140357794	3	-	140348483	140348483	8553170	2	57,513,	0,8798,
#Partially deleted in new
chr5	140360201	140375143	chr5:140360201-140375143	3	+	140360236	140372798	789624	22	265,161,114,56,158,88,155,117,175,134,263,59,189,114,162,179,73,69,174,156,99,317,	0,610,1052,1606,1815,2243,2710,3237,3526,3852,4161,5318,5632,5949,7218,7518,8385,10893,11249,12040,12543,14625,
#Partially deleted in new
chr5	140360209	140375002	chr5:140360209-140375002	1	+	140360236	140372798	789624	22	257,161,114,56,158,88,155,117,142,134,263,50,189,114,162,179,73,69,174,156,99,176,	0,602,1044,1598,1807,2235,2702,3229,3551,3844,4153,5310,5624,5941,7210,7510,8377,10885,11241,12032,12535,14617,
#Partially deleted in new
chr5	140360209	140374844	chr5:140360209-140374844	1	+	140360236	140372798	789624	21	257,161,114,56,158,88,155,117,175,134,263,59,114,162,179,73,69,174,156,99,75,	0,602,1044,1598,1807,2235,2702,3229,3518,3844,4153,5310,5941,7210,7510,8377,10885,11241,12032,12535,14560,
#Partially deleted in new
chr5	140360214	140375008	chr5:140360214-140375008	1	+	140360236	140372798	789624	22	252,233,114,56,158,88,155,117,175,134,263,59,189,114,162,179,73,69,174,156,99,239,	0,525,1039,1593,1802,2230,2697,3224,3513,3839,4148,5305,5619,5936,7205,7505,8372,10880,11236,12027,12530,14555,
#Partially deleted in new
chr5	140365856	140367728	chr5:140365856-140367728	0	+	140365856	140365856	8553170	3	166,114,309,	0,294,1563,
#Partially deleted in new
chr5	140370890	140401367	chr5:140370890-140401367	3	-	140370890	140370890	8553170	2	292,257,	0,30220,
#Partially deleted in new
chr5	140371448	140374929	chr5:140371448-140374929	0	+	140371448	140371448	8553170	4	176,245,99,160,	0,793,1296,3321,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	140397322	140397444	chr5:140397322-140397444	3	-	140397322	140397322	8553170	1	122,	0,
#Partially deleted in new
chr5	140401813	140539418	chr5:140401813-140539418	1	+	140526354	140539418	789624	33	460,154,157,148,148,234,95,238,192,110,88,128,144,103,759,146,112,146,143,214,176,163,96,117,175,448,147,150,1613,201,176,165,60,	0,34290,36647,38305,39181,43928,47397,56811,57350,62853,80766,83307,83775,85144,94706,103007,103308,103910,105021,105971,107823,108205,111014,111549,122252,124182,125114,126059,126370,135575,136272,137105,137545,
#Partially deleted in new
chr5	140401813	140539856	chr5:140401813-140539856	3	+	140401967	140539418	789624	34	460,154,157,148,148,234,95,238,192,110,88,128,144,103,759,146,112,146,143,214,176,163,96,117,175,448,147,150,1613,177,201,176,165,498,	0,34290,36647,38305,39181,43928,47397,56811,57350,62853,80766,83307,83775,85144,94706,103007,103308,103910,105021,105971,107823,108205,111014,111549,122252,124182,125114,126059,126370,133548,135575,136272,137105,137545,
#Partially deleted in new
chr5	140401813	140472476	chr5:140401813-140472476	1	+	140401967	140472312	789624	10	460,154,157,148,148,234,95,238,192,238,	0,34290,36647,38305,39181,43928,47397,56811,57350,70425,
#Partially deleted in new
chr5	140401849	140526142	chr5:140401849-140526142	0	+	140401967	140526142	789624	27	424,154,157,148,148,234,95,238,192,110,57,88,128,144,103,759,146,112,146,143,214,176,163,96,117,175,147,	0,34254,36611,38269,39145,43892,47361,56775,57314,62817,70389,80730,83271,83739,85108,94670,102971,103272,103874,104985,105935,107787,108169,110978,111513,122216,124146,
#Partially deleted in new
chr5	140401853	140472477	chr5:140401853-140472477	1	+	140401967	140472340	789624	11	420,154,157,148,148,234,95,238,192,110,239,	0,34250,36607,38265,39141,43888,47357,56771,57310,62813,70385,
#Partially deleted in new
chr5	140401855	140445974	chr5:140401855-140445974	0	+	140401967	140445974	789624	6	418,154,115,148,148,233,	0,34248,36647,38263,39139,43886,
#Partially deleted in new
chr5	140401907	140549569	chr5:140401907-140549569	3	+	140401967	140549237	789624	36	366,154,157,148,148,234,95,238,192,110,88,128,144,103,759,146,112,146,143,214,176,163,96,117,175,448,147,150,1613,177,201,176,165,110,171,336,	0,34196,36553,38211,39087,43834,47303,56717,57256,62759,80672,83213,83681,85050,94612,102913,103214,103816,104927,105877,107729,108111,110920,111455,122158,124088,125020,125965,126276,133454,135481,136178,137011,140264,146998,147326,
#Partially deleted in new
chr5	140401920	140472477	chr5:140401920-140472477	1	+	140401967	140472340	789624	11	353,154,124,148,148,234,95,238,192,110,239,	0,34183,36573,38198,39074,43821,47290,56704,57243,62746,70318,
#Partially deleted in new
chr5	140458732	140465173	chr5:140458732-140465173	0	+	140458732	140458732	8553170	3	130,192,507,	0,431,5934,
#Partially deleted in new
chr5	140459256	140524133	chr5:140459256-140524133	0	+	140459256	140524133	789624	17	99,110,57,88,128,144,55,146,112,146,143,214,176,163,96,117,68,	0,5410,12982,23323,25864,26332,27749,45564,45865,46467,47578,48528,50380,50762,53571,54106,64809,
#Partially deleted in new
chr5	140482579	140524115	chr5:140482579-140524115	0	+	140482579	140524115	789624	14	88,128,144,103,146,112,146,143,214,176,163,96,117,50,	0,2541,3009,4378,22241,22542,23144,24255,25205,27057,27439,30248,30783,41486,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	140484759	140486076	chr5:140484759-140486076	0	+	140484759	140484759	8553170	2	489,488,	0,829,
#Partially deleted in new
chr5	140486566	140496547	chr5:140486566-140496547	0	+	140486566	140486566	8553170	2	494,28,	0,9953,
#Deleted in new
chr5	140496649	140498190	chr5:140496649-140498190	0	+	140496649	140496649	8553170	2	629,153,	0,1388,
#Partially deleted in new
chr5	140504768	140509669	chr5:140504768-140509669	0	+	140504768	140504768	8553170	5	198,112,146,143,33,	0,353,955,2066,4868,
#Partially deleted in new
chr5	140510109	140539849	chr5:140510109-140539849	0	+	140510109	140539418	789624	13	72,96,117,175,448,147,150,1613,177,252,176,165,491,	0,2718,3253,13956,15886,16818,17763,18074,25252,27228,27976,28809,29249,
#Partially deleted in new
chr5	140524182	140539848	chr5:140524182-140539848	0	+	140524182	140539418	789624	10	58,448,147,150,1613,177,252,149,165,490,	0,1813,2745,3690,4001,11179,13155,13903,14736,15176,
#Partially deleted in new
chr5	140526032	140539856	chr5:140526032-140539856	0	+	140526032	140539418	789624	9	411,147,150,1613,177,201,149,165,498,	0,895,1840,2151,9329,11356,12053,12886,13326,
#Partially deleted in new
chr5	140526152	140539849	chr5:140526152-140539849	0	+	140526152	140539418	789624	8	291,147,150,1613,201,176,165,491,	0,775,1720,2031,11236,11933,12766,13206,
#Deleted in new
chr5	140527351	140527428	chr5:140527351-140527428	3	-	140527351	140527351	8553170	1	77,	0,
#Partially deleted in new
chr5	140528825	140549569	chr5:140528825-140549569	0	+	140528825	140528825	8553170	7	971,177,252,176,3363,171,336,	0,6536,8512,9260,10093,20080,20408,
#Partially deleted in new
chr5	140528913	140549569	chr5:140528913-140549569	0	+	140528913	140549237	789624	8	883,177,252,149,165,110,171,336,	0,6448,8424,9172,10005,13258,19992,20320,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	140529629	140535904	chr5:140529629-140535904	0	+	140529629	140529629	8553170	2	167,543,	0,5732,
#Deleted in new
chr5	140537048	140538262	chr5:140537048-140538262	0	+	140537048	140537048	8553170	2	541,177,	0,1037,
#Partially deleted in new
chr5	140537339	140551128	chr5:140537339-140551128	0	-	140537574	140551128	789624	3	322,71,68,	0,13501,13721,
#Deleted in new
chr5	140537388	140539342	chr5:140537388-140539342	0	+	140537388	140539098	789624	3	201,176,424,	0,697,1530,
#Deleted in new
chr5	140547665	140549578	chr5:140547665-140549578	3	+	140547737	140549262	789624	3	175,171,345,	0,1240,1568,
#Partially deleted in new
chr5	140550067	140558252	chr5:140550067-140558252	3	-	140550699	140557488	0	5	844,109,203,126,825,	0,993,1914,7079,7360,
#Partially deleted in new
chr5	140550067	140557456	chr5:140550067-140557456	0	-	140550067	140550067	789624	4	844,109,203,310,	0,993,1914,7079,
#Partially deleted in new
chr5	140550533	140557446	chr5:140550533-140557446	0	-	140550533	140550533	8553170	3	378,1124,300,	0,527,6613,
#Partially deleted in new
chr5	140550551	140557446	chr5:140550551-140557446	0	-	140550551	140550551	8553170	3	360,109,300,	0,509,6595,
#Partially deleted in new
chr5	140550681	140557677	chr5:140550681-140557677	0	-	140550681	140550681	8553170	5	230,109,203,186,250,	0,379,1300,6465,6746,
#Partially deleted in new
chr5	140558267	140562907	chr5:140558267-140562907	0	-	140558267	140558267	8553170	8	554,192,116,84,85,641,147,245,	0,2045,2371,2750,3097,3319,4085,4395,
#Partially deleted in new
chr5	140558268	140564604	chr5:140558268-140564604	1	-	140560400	140564245	789624	12	553,192,84,85,115,6,128,147,61,77,164,408,	0,2044,2749,3096,3318,3575,3831,4084,4394,5325,5483,5928,
#Partially deleted in new
chr5	140558268	140564332	chr5:140558268-140564332	0	-	140561986	140564245	0	13	553,192,116,84,85,115,203,87,147,61,77,164,136,	0,2044,2370,2749,3096,3318,3575,3872,4084,4394,5325,5483,5928,
#Partially deleted in new
chr5	140558268	140564596	chr5:140558268-140564596	0	-	140558268	140558268	8553170	10	553,192,116,84,85,641,147,61,77,845,	0,2044,2370,2749,3096,3318,4084,4394,5325,5483,
#Partially deleted in new
chr5	140558271	140564260	chr5:140558271-140564260	1	-	140558584	140564245	0	13	550,192,116,84,85,136,6,128,147,61,77,164,64,	0,2041,2367,2746,3093,3315,3572,3828,4081,4391,5322,5480,5925,
#Partially deleted in new
chr5	140558271	140564260	chr5:140558271-140564260	1	-	140558584	140564245	0	12	550,192,116,84,85,136,128,147,61,77,164,64,	0,2041,2367,2746,3093,3315,3828,4081,4391,5322,5480,5925,
#Partially deleted in new
chr5	140558271	140564689	chr5:140558271-140564689	3	-	140558584	140564245	0	13	550,192,116,84,85,115,6,128,147,61,77,164,493,	0,2041,2367,2746,3093,3315,3572,3828,4081,4391,5322,5480,5925,
#Partially deleted in new
chr5	140558271	140564245	chr5:140558271-140564245	0	-	140561883	140564245	0	13	550,192,116,84,85,115,152,128,147,61,77,164,49,	0,2041,2367,2746,3093,3315,3572,3828,4081,4391,5322,5480,5925,
#Partially deleted in new
chr5	140558393	140564371	chr5:140558393-140564371	0	-	140562095	140564245	789624	9	428,192,116,84,85,641,147,164,175,	0,1919,2245,2624,2971,3193,3959,5358,5803,
#Partially deleted in new
chr5	140558584	140564245	chr5:140558584-140564245	1	-	140558584	140564245	0	12	237,192,116,84,85,115,128,147,61,77,164,49,	0,1728,2054,2433,2780,3002,3515,3768,4078,5009,5167,5612,
#Partially deleted in new
chr5	140560400	140564245	chr5:140560400-140564245	1	-	140560400	140564245	789624	10	104,84,85,115,128,147,61,77,164,49,	0,617,964,1186,1699,1952,2262,3193,3351,3796,
#Deleted in new
chr5	140560698	140562149	chr5:140560698-140562149	0	-	140560698	140560698	8553170	5	56,84,85,263,50,	0,319,666,888,1401,
#Partially deleted in new
chr5	140560718	140564701	chr5:140560718-140564701	0	-	140560718	140560718	8553170	10	36,84,85,115,128,147,61,77,164,46,	0,299,646,868,1381,1634,1944,2875,3033,3937,
#Deleted in new
chr5	140561642	140562507	chr5:140561642-140562507	0	-	140561642	140561642	8553170	3	353,128,155,	0,457,710,
#Deleted in new
chr5	140561842	140562842	chr5:140561842-140562842	0	-	140561842	140561842	8553170	2	385,490,	0,510,
#Partially deleted in new
chr5	140562031	140564274	chr5:140562031-140564274	0	-	140562031	140562031	8553170	6	196,147,61,77,164,78,	0,321,631,1562,1720,2165,
#Partially deleted in new
chr5	140562172	140564781	chr5:140562172-140564781	0	-	140562172	140562172	8553170	6	55,147,61,77,164,69,	0,180,490,1421,1579,2540,
#Partially deleted in new
chr5	140562368	140564469	chr5:140562368-140564469	0	-	140562368	140562368	8553170	4	131,61,77,718,	0,294,1225,1383,
#Partially deleted in new
chr5	140562442	140592123	chr5:140562442-140592123	3	-	140562442	140562442	8553170	6	57,61,77,164,117,100,	0,220,1151,1309,28432,29581,
#Deleted in new
chr5	140563337	140564389	chr5:140563337-140564389	0	-	140563337	140563337	8553170	3	333,164,193,	0,414,859,
#Deleted in new
chr5	140563405	140564749	chr5:140563405-140564749	0	-	140563405	140563405	8553170	2	510,37,	0,1307,
#Deleted in new
chr5	140563533	140564374	chr5:140563533-140564374	0	-	140563533	140563533	8553170	2	382,178,	0,663,
#Deleted in new
chr5	140563670	140563751	chr5:140563670-140563751	3	-	140563670	140563670	5263520	1	81,	0,
#Partially deleted in new
chr5	140563889	140574197	chr5:140563889-140574197	0	-	140563889	140563889	8553170	6	26,120,70,52,57,233,	0,7309,7889,8038,9245,10075,
#Deleted in new
chr5	140564455	140569103	chr5:140564455-140569103	3	+	140567169	140568144	789624	3	403,99,2539,	0,1417,2109,
#Deleted in new
chr5	140564827	140567117	chr5:140564827-140567117	1	+	140564843	140566762	789624	3	31,99,553,	0,1045,1737,
#Deleted in new
chr5	140564834	140569098	chr5:140564834-140569098	1	+	140567169	140568144	789624	3	24,99,2534,	0,1038,1730,
#Deleted in new
chr5	140564890	140569100	chr5:140564890-140569100	1	+	140567169	140568144	789624	2	1081,2536,	0,1674,
#Partially deleted in new
chr5	140569961	140594570	chr5:140569961-140594570	7	-	140569961	140569961	16724991	15	248,159,159,70,55,57,51,209,134,117,87,83,78,120,72,	0,326,1237,1817,1966,3173,3739,3862,5481,20913,21102,21708,22062,24283,24537,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	140571198	140593757	chr5:140571198-140593757	4	-	140571198	140571198	16724991	6	120,70,55,117,78,105,	0,580,729,19676,20825,22454,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	140575709	140593741	chr5:140575709-140593741	4	-	140575709	140575709	16724991	4	170,117,78,89,	0,15165,16314,17943,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	140576947	140593752	chr5:140576947-140593752	4	-	140576947	140576947	16724991	6	115,117,77,83,78,100,	0,13927,14126,14722,15076,16705,
#Partially deleted in new
chr5	140579666	140579792	chr5:140579666-140579792	3	+	140579666	140579666	8553170	1	126,	0,
#Partially deleted in new
chr5	140581503	140582335	chr5:140581503-140582335	7	+	140581503	140581503	16724991	1	832,	0,
#Partially deleted in new
chr5	140609084	140609400	chr5:140609084-140609400	7	+	140609084	140609084	16724991	1	316,	0,
#Deleted in new
chr5	140631727	140633701	chr5:140631727-140633701	1	-	140631855	140633071	0	2	1253,633,	0,1341,
#Deleted in new
chr5	140631727	140633701	chr5:140631727-140633701	3	-	140631855	140633071	0	3	1253,224,171,	0,1341,1803,
#Deleted in new
chr5	140632343	140633651	chr5:140632343-140633651	0	-	140632343	140633071	789624	3	637,124,121,	0,725,1187,
#Deleted in new
chr5	140632740	140633672	chr5:140632740-140633672	0	-	140632740	140633071	789624	3	240,124,121,	0,328,811,
#Deleted in new
chr5	140632818	140633700	chr5:140632818-140633700	0	-	140632818	140633071	789624	3	162,224,170,	0,250,712,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	140638739	140647314	chr5:140638739-140647314	0	-	140638739	140638739	8553170	2	517,59,	0,8516,
#Partially deleted in new
chr5	140639426	140645402	chr5:140639426-140645402	3	+	140639527	140645098	789624	12	186,113,116,184,105,86,117,112,187,95,168,418,	0,312,2238,2443,2888,3159,3498,4137,4353,4673,5146,5558,
#Partially deleted in new
chr5	140639434	140642053	chr5:140639434-140642053	0	+	140641882	140642053	789624	4	129,113,116,184,	0,304,2230,2435,
#Partially deleted in new
chr5	140639447	140641727	chr5:140639447-140641727	0	+	140639527	140639789	789624	4	161,113,203,63,	0,291,1570,2217,
#Partially deleted in new
chr5	140639452	140642385	chr5:140639452-140642385	0	+	140639452	140639452	8553170	3	160,113,721,	0,286,2212,
#Partially deleted in new
chr5	140639462	140641780	chr5:140639462-140641780	0	+	140639527	140639789	789624	3	146,113,116,	0,276,2202,
#Partially deleted in new
chr5	140639468	140643012	chr5:140639468-140643012	0	+	140639527	140639789	789624	5	140,113,116,86,88,	0,270,2196,3117,3456,
#Partially deleted in new
chr5	140639489	140642989	chr5:140639489-140642989	0	+	140639527	140641759	789624	5	123,126,116,181,65,	0,249,2175,3001,3435,
#Partially deleted in new
chr5	140639490	140642413	chr5:140639490-140642413	0	+	140639490	140639490	8553170	4	361,116,184,99,	0,2174,2379,2824,
#Partially deleted in new
chr5	140639494	140642337	chr5:140639494-140642337	0	+	140639527	140639789	789624	4	114,113,116,468,	0,244,2170,2375,
#Partially deleted in new
chr5	140639503	140645408	chr5:140639503-140645408	1	+	140639527	140645098	789624	12	109,113,116,184,105,86,135,112,187,95,168,424,	0,235,2161,2366,2811,3082,3403,4060,4276,4596,5069,5481,
#Partially deleted in new
chr5	140641305	140645408	chr5:140641305-140645408	0	+	140641305	140641305	8553170	10	475,184,105,86,117,112,187,95,168,424,	0,564,1009,1280,1619,2258,2474,2794,3267,3679,
#Partially deleted in new
chr5	140641897	140644183	chr5:140641897-140644183	0	+	140641897	140641897	8553170	7	156,105,86,135,112,187,84,	0,417,688,1009,1666,1882,2202,
#Partially deleted in new
chr5	140642571	140645311	chr5:140642571-140645311	0	+	140642571	140642571	8553170	6	100,117,112,187,89,739,	0,353,992,1208,1528,2001,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	140643362	140643912	chr5:140643362-140643912	0	+	140643362	140643362	8553170	2	313,133,	0,417,
#Partially deleted in new
chr5	140645284	140647785	chr5:140645284-140647785	3	-	140645586	140647583	0	3	394,107,303,	0,1971,2198,
#Partially deleted in new
chr5	140645368	140647645	chr5:140645368-140647645	1	-	140645702	140647583	0	3	357,107,163,	0,1887,2114,
#Partially deleted in new
chr5	140645473	140647771	chr5:140645473-140647771	0	-	140645473	140645473	8553170	2	205,516,	0,1782,
#Partially deleted in new
chr5	140647057	140653073	chr5:140647057-140653073	0	+	140647305	140653073	789624	5	252,67,93,60,97,	0,1413,4656,5030,5919,
#Partially deleted in new
chr5	140647769	140662478	chr5:140647769-140662478	3	+	140647908	140662329	0	20	155,67,93,60,168,115,71,47,164,109,40,226,19,79,81,58,89,109,35,177,	0,701,3944,4318,5207,6168,6746,6911,8059,9784,10967,11169,11545,11986,12345,12988,13850,14129,14409,14532,
#Partially deleted in new
chr5	140647841	140653141	chr5:140647841-140653141	0	+	140647908	140653141	789624	5	83,67,93,81,165,	0,629,3872,4225,5135,
#Partially deleted in new
chr5	140647841	140655992	chr5:140647841-140655992	0	+	140647908	140655992	789624	9	83,67,93,60,168,115,71,47,164,	0,629,3872,4246,5135,6096,6674,6839,7987,
#Deleted in new
chr5	140647843	140647926	chr5:140647843-140647926	3	+	140647843	140647843	5263520	1	83,	0,
#Partially deleted in new
chr5	140648093	140654727	chr5:140648093-140654727	0	+	140648146	140654727	789624	8	69,67,93,60,168,115,71,47,	0,377,3620,3994,4883,5844,6422,6587,
#Partially deleted in new
chr5	140648313	140651747	chr5:140648313-140651747	0	+	140648313	140648313	8553170	2	224,34,	0,3400,
#Partially deleted in new
chr5	140658735	140662214	chr5:140658735-140662214	1	+	140658771	140661641	789624	10	41,226,19,79,81,58,12,76,109,36,	0,203,579,1020,1379,2022,2884,2897,3163,3443,
#Partially deleted in new
chr5	140658978	140660885	chr5:140658978-140660885	0	+	140658978	140658978	8553170	5	186,19,79,81,128,	0,336,777,1136,1779,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	140660154	140662479	chr5:140660154-140662479	0	+	140660154	140660154	8553170	3	1554,109,301,	0,1744,2024,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	140664675	140672345	chr5:140664675-140672345	3	+	140664912	140669654	789624	7	428,101,88,180,100,170,3013,	0,3558,3739,3936,4215,4403,4657,
#Partially deleted in new
chr5	140664867	140672344	chr5:140664867-140672344	0	+	140664912	140668456	789624	6	236,269,180,358,358,1076,	0,3366,3744,4023,4465,6401,
#Partially deleted in new
chr5	140666574	140672344	chr5:140666574-140672344	0	+	140666574	140666574	8553170	6	1928,180,100,170,358,1076,	0,2037,2316,2504,2758,4694,
#Partially deleted in new
chr5	140668233	140674124	chr5:140668233-140674124	0	+	140668714	140669654	789624	8	101,88,180,100,170,358,209,1747,	0,181,378,657,845,1099,3088,4144,
#Partially deleted in new
chr5	140668920	140672366	chr5:140668920-140672366	0	+	140668920	140668920	8553170	4	70,170,358,1098,	0,158,412,2348,
#Deleted in new
chr5	140670793	140673586	chr5:140670793-140673586	3	-	140671292	140673542	789624	4	957,462,118,68,	0,1651,2477,2725,
#Partially deleted in new
chr5	140673903	140691537	chr5:140673903-140691537	1	-	140674256	140691304	789624	10	425,147,117,243,128,94,99,108,90,323,	0,775,1113,2750,3085,3423,3751,4004,16951,17311,
#Partially deleted in new
chr5	140673903	140691377	chr5:140673903-140691377	1	-	140674256	140691304	0	13	425,147,117,243,128,94,99,108,66,96,120,90,163,	0,775,1113,2750,3085,3423,3751,4004,5158,5884,9196,16951,17311,
#Partially deleted in new
chr5	140673904	140691862	chr5:140673904-140691862	3	-	140674256	140691304	0	13	424,147,117,243,128,94,99,108,126,96,120,90,648,	0,774,1112,2749,3084,3422,3750,4003,5097,5883,9195,16950,17310,
#Partially deleted in new
chr5	140673904	140691367	chr5:140673904-140691367	1	-	140674256	140691304	0	13	424,147,117,243,128,94,99,108,126,96,120,90,153,	0,774,1112,2749,3084,3422,3750,4003,5097,5883,9195,16950,17310,
#Partially deleted in new
chr5	140673905	140691383	chr5:140673905-140691383	1	-	140674256	140691304	0	12	423,147,117,243,128,94,99,108,66,96,90,169,	0,773,1111,2748,3083,3421,3749,4002,5156,5882,16949,17309,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	140673905	140685338	chr5:140673905-140685338	1	-	140674256	140683192	789624	12	423,147,117,243,128,94,99,108,126,96,120,1793,	0,773,1111,2748,3083,3421,3749,4002,5096,5882,9194,9640,
#Partially deleted in new
chr5	140673914	140691341	chr5:140673914-140691341	1	-	140674256	140691304	0	12	414,147,117,243,128,94,99,108,126,96,90,127,	0,764,1102,2739,3074,3412,3740,3993,5087,5873,16940,17300,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr5	140673919	140691367	chr5:140673919-140691367	0	-	140683664	140691304	789624	14	409,147,117,243,128,94,99,108,126,96,120,122,90,153,	0,759,1097,2734,3069,3407,3735,3988,5082,5868,9180,9626,16935,17295,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr5	140673919	140691336	chr5:140673919-140691336	0	-	140687858	140691304	789624	14	409,147,117,243,128,94,99,108,126,96,120,188,90,122,	0,759,1097,2734,3069,3407,3735,3988,5082,5868,9180,13826,16935,17295,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr5	140673931	140691367	chr5:140673931-140691367	0	-	140687858	140691304	789624	15	397,147,117,243,128,94,99,108,126,96,120,122,188,90,153,	0,747,1085,2722,3057,3395,3723,3976,5070,5856,9168,13489,13814,16923,17283,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr5	140673931	140691236	chr5:140673931-140691236	0	-	140683619	140691236	789624	14	397,147,117,243,128,94,99,108,126,96,120,119,90,22,	0,747,1085,2722,3057,3395,3723,3976,5070,5856,9168,9614,16923,17283,
#Deleted in new
chr5	140674173	140675333	chr5:140674173-140675333	0	-	140674173	140674173	8553170	3	155,147,317,	0,505,843,
#Partially deleted in new
chr5	140674200	140691341	chr5:140674200-140691341	1	-	140674256	140691304	789624	11	128,147,117,243,128,94,99,108,120,90,127,	0,478,816,2453,2788,3126,3454,3707,8899,16654,17014,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	140675422	140691341	chr5:140675422-140691341	0	-	140675422	140675422	8553170	7	1474,128,94,1473,96,90,127,	0,1566,1904,2232,4365,15432,15792,
#Partially deleted in new
chr5	140676653	140691389	chr5:140676653-140691389	0	-	140676653	140691304	789624	7	243,128,94,99,120,90,175,	0,335,673,1001,6446,14201,14561,
#Partially deleted in new
chr5	140679388	140691339	chr5:140679388-140691339	0	-	140679388	140679388	8553170	4	495,120,90,125,	0,3711,11466,11826,
#Partially deleted in new
chr5	140682760	140691296	chr5:140682760-140691296	0	-	140682760	140682760	8553170	3	459,90,82,	0,8094,8454,
#Partially deleted in new
chr5	140691425	140699318	chr5:140691425-140699318	3	+	140691648	140698552	789624	13	331,75,120,96,126,108,99,94,128,243,117,147,826,	0,2165,2509,2759,4082,4312,4677,5095,5517,5738,6143,6506,7067,
#Partially deleted in new
chr5	140691429	140698772	chr5:140691429-140698772	0	+	140691648	140693951	789624	12	86,150,175,120,108,99,94,128,243,117,147,280,	0,177,2061,2505,4308,4673,5091,5513,5734,6139,6502,7063,
#Partially deleted in new
chr5	140691430	140696344	chr5:140691430-140696344	0	+	140691648	140693951	789624	6	326,175,120,96,126,607,	0,2060,2504,2754,4077,4307,
#Partially deleted in new
chr5	140691451	140699234	chr5:140691451-140699234	1	+	140693961	140698552	789624	14	64,226,175,120,96,126,108,99,94,128,243,117,147,742,	0,340,2039,2483,2733,4056,4286,4651,5069,5491,5712,6117,6480,7041,
#Partially deleted in new
chr5	140691452	140697298	chr5:140691452-140697298	0	+	140693961	140697298	789624	11	63,143,175,120,96,126,108,99,94,128,135,	0,342,2038,2482,2732,4055,4285,4650,5068,5490,5711,
#Partially deleted in new
chr5	140691452	140699280	chr5:140691452-140699280	1	+	140691648	140698552	789624	12	304,75,120,96,126,108,94,128,243,117,147,788,	0,2138,2482,2732,4055,4285,5068,5490,5711,6116,6479,7040,
#Partially deleted in new
chr5	140691452	140699271	chr5:140691452-140699271	1	+	140691648	140698552	789624	15	63,150,18,75,120,96,126,108,99,94,128,243,117,147,779,	0,154,2038,2138,2482,2732,4055,4285,4650,5068,5490,5711,6116,6479,7040,
#Partially deleted in new
chr5	140691454	140699268	chr5:140691454-140699268	1	+	140691648	140698552	789624	10	302,75,120,108,94,128,243,117,147,776,	0,2136,2480,4283,5066,5488,5709,6114,6477,7038,
#Partially deleted in new
chr5	140691454	140699291	chr5:140691454-140699291	1	+	140693961	140698552	789624	14	61,223,75,120,96,126,108,99,94,128,243,117,147,799,	0,340,2136,2480,2730,4053,4283,4648,5066,5488,5709,6114,6477,7038,
#Partially deleted in new
chr5	140691457	140699305	chr5:140691457-140699305	1	+	140691648	140698552	789624	13	299,75,120,96,126,108,99,94,128,243,117,147,813,	0,2133,2477,2727,4050,4280,4645,5063,5485,5706,6111,6474,7035,
#Partially deleted in new
chr5	140691457	140699291	chr5:140691457-140699291	0	+	140691648	140698552	789624	14	299,18,75,120,96,126,108,99,94,128,243,117,147,799,	0,2033,2133,2477,2727,4050,4280,4645,5063,5485,5706,6111,6474,7035,
#Partially deleted in new
chr5	140691457	140699299	chr5:140691457-140699299	0	+	140693961	140696088	789624	14	58,18,75,120,96,126,108,173,94,128,243,117,147,807,	0,2033,2133,2477,2727,4050,4280,4571,5063,5485,5706,6111,6474,7035,
#Partially deleted in new
chr5	140691467	140695568	chr5:140691467-140695568	0	+	140691467	140691467	8553170	6	48,143,75,120,96,61,	0,327,2123,2467,2717,4040,
#Partially deleted in new
chr5	140691469	140699235	chr5:140691469-140699235	1	+	140691648	140698552	789624	14	46,150,75,120,96,126,108,99,94,128,243,117,147,743,	0,137,2121,2465,2715,4038,4268,4633,5051,5473,5694,6099,6462,7023,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	140691483	140693564	chr5:140691483-140693564	0	+	140691483	140691483	8553170	3	32,535,74,	0,311,2007,
#Partially deleted in new
chr5	140691513	140693803	chr5:140691513-140693803	0	+	140691513	140691513	8553170	2	243,313,	0,1977,
#Partially deleted in new
chr5	140691562	140693987	chr5:140691562-140693987	0	+	140691562	140691562	8553170	3	455,75,53,	0,2028,2372,
#Partially deleted in new
chr5	140691608	140698628	chr5:140691608-140698628	1	+	140691648	140698552	789624	12	148,120,96,126,108,99,94,128,243,117,147,136,	0,2326,2576,3899,4129,4494,4912,5334,5555,5960,6323,6884,
#Partially deleted in new
chr5	140691613	140698938	chr5:140691613-140698938	1	+	140691648	140698552	789624	8	143,108,94,128,243,117,147,446,	0,4124,4907,5329,5550,5955,6318,6879,
#Partially deleted in new
chr5	140691682	140699248	chr5:140691682-140699248	0	+	140691682	140696088	789624	13	74,75,120,96,126,108,173,94,128,243,117,147,756,	0,1908,2252,2502,3825,4055,4346,4838,5260,5481,5886,6249,6810,
#Partially deleted in new
chr5	140693475	140696156	chr5:140693475-140696156	0	+	140693475	140693475	8553170	6	190,120,96,126,108,54,	0,459,709,2032,2262,2627,
#Partially deleted in new
chr5	140698679	140704502	chr5:140698679-140704502	0	+	140702121	140704502	789624	5	152,94,124,74,77,	0,2139,3326,5238,5746,
#Partially deleted in new
chr5	140700333	140706676	chr5:140700333-140706676	3	+	140700460	140705756	0	6	145,94,124,74,146,1064,	0,485,1672,3584,4092,5279,
#Partially deleted in new
chr5	140700463	140705881	chr5:140700463-140705881	0	+	140700463	140704495	789624	6	15,94,124,87,146,269,	0,355,1542,3454,3962,5149,
#Deleted in new
chr5	140711274	140711373	chr5:140711274-140711373	3	+	140711274	140711274	5263520	1	99,	0,
#Deleted in new
chr5	140718924	140719013	chr5:140718924-140719013	3	+	140718924	140718924	5263520	1	89,	0,
#Deleted in new
chr5	140726157	140726246	chr5:140726157-140726246	3	+	140726157	140726157	5263520	1	89,	0,
#Partially deleted in new
chr5	140732289	140732863	chr5:140732289-140732863	7	-	140732289	140732289	16724991	2	87,162,	0,412,
#Deleted in new
chr5	140764109	140764821	chr5:140764109-140764821	7	+	140764109	140764109	16724991	1	712,	0,
#Deleted in new
chr5	140786135	140788861	chr5:140786135-140788861	1	+	140786290	140788714	789624	1	2726,	0,
#Partially deleted in new
chr5	140786290	141010080	chr5:140786290-141010080	1	+	140786290	141009937	789624	4	1602,59,89,454,	0,192658,196184,223336,
#Partially deleted in new
chr5	140786290	141012347	chr5:140786290-141012347	3	+	140786290	141009937	789624	4	2394,59,89,2721,	0,192658,196184,223336,
#Partially deleted in new
chr5	140788456	140822193	chr5:140788456-140822193	3	-	140788456	140788456	8553170	2	398,655,	0,33082,
#Partially deleted in new
chr5	140788811	140801565	chr5:140788811-140801565	1	-	140788811	140788811	8553170	3	43,101,369,	0,12179,12385,
#Deleted in new
chr5	140794851	140797477	chr5:140794851-140797477	1	+	140794964	140797439	789624	1	2626,	0,
#Partially deleted in new
chr5	140794858	140805621	chr5:140794858-140805621	1	+	140794964	140805098	789624	2	2494,562,	0,10201,
#Partially deleted in new
chr5	140794964	141012344	chr5:140794964-141012344	3	+	140794964	141009937	789624	4	2388,59,89,2718,	0,183984,187510,214662,
#Deleted in new
chr5	140801027	140805621	chr5:140801027-140805621	1	+	140801197	140803672	789624	1	4594,	0,
#Partially deleted in new
chr5	140801197	141012344	chr5:140801197-141012344	3	+	140801197	141009937	789624	4	2394,59,89,2718,	0,177751,181277,208429,
#Deleted in new
chr5	140806928	140809518	chr5:140806928-140809518	1	+	140806928	140809518	789624	2	17,2311,	0,279,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	140807036	140817593	chr5:140807036-140817593	1	+	140807187	140809584	789624	1	10557,	0,
#Partially deleted in new
chr5	140807073	141011579	chr5:140807073-141011579	1	+	140807187	141010236	789624	5	2499,59,89,102,1414,	0,171875,175401,202553,203092,
#Partially deleted in new
chr5	140807187	141012344	chr5:140807187-141012344	3	+	140807187	141009937	789624	4	2385,59,89,2718,	0,171761,175287,202439,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	140821603	140825851	chr5:140821603-140825851	1	+	140821775	140824226	789624	1	4248,	0,
#Partially deleted in new
chr5	140821636	141011581	chr5:140821636-141011581	1	+	140821775	141010236	789624	5	2491,59,89,102,1416,	0,157312,160838,187990,188529,
#Partially deleted in new
chr5	140821775	141012344	chr5:140821775-141012344	3	+	140821775	141009937	789624	4	2352,59,89,2718,	0,157173,160699,187851,
#Deleted in new
chr5	140827957	140831224	chr5:140827957-140831224	1	+	140828091	140830503	789624	1	3267,	0,
#Partially deleted in new
chr5	140827977	141012344	chr5:140827977-141012344	3	+	140828091	141009937	789624	4	2508,59,89,2718,	0,150971,154497,181649,
#Partially deleted in new
chr5	140828064	141010080	chr5:140828064-141010080	1	+	140828091	141009937	789624	4	1629,59,89,454,	0,150884,154410,181562,
#Deleted in new
chr5	140834247	140837169	chr5:140834247-140837169	1	+	140834383	140836753	789624	1	2922,	0,
#Partially deleted in new
chr5	140834383	141012344	chr5:140834383-141012344	3	+	140834383	141009937	789624	4	2355,59,89,2718,	0,144565,148091,175243,
#Deleted in new
chr5	140841186	140843802	chr5:140841186-140843802	1	+	140841321	140843766	789624	1	2616,	0,
#Partially deleted in new
chr5	140841321	141012344	chr5:140841321-141012344	3	+	140841321	141009937	789624	4	2394,59,89,2718,	0,137627,141153,168305,
#Partially deleted in new
chr5	140847462	141012344	chr5:140847462-141012344	3	+	140848495	141009937	789624	4	3427,59,89,2718,	0,131486,135012,162164,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	140847771	140854671	chr5:140847771-140854671	1	+	140848495	140851024	789624	1	6900,	0,
#Deleted in new
chr5	140849104	140849696	chr5:140849104-140849696	3	-	140849104	140849104	8553170	1	592,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	140855882	140868240	chr5:140855882-140868240	1	+	140856048	140858583	789624	1	12358,	0,
#Partially deleted in new
chr5	140856009	141011628	chr5:140856009-141011628	1	+	140856048	141009937	789624	4	1638,59,89,2002,	0,122939,126465,153617,
#Partially deleted in new
chr5	140856048	141012344	chr5:140856048-141012344	3	+	140856048	141009937	789624	4	2388,59,89,2718,	0,122900,126426,153578,
#Deleted in new
chr5	140861223	140863521	chr5:140861223-140863521	7	+	140861223	140861223	16724991	1	2298,	0,
#Partially deleted in new
chr5	140867512	140867959	chr5:140867512-140867959	3	-	140867512	140867512	8553170	1	447,	0,
#Partially deleted in new
chr5	140868182	140871600	chr5:140868182-140871600	1	+	140869103	140871536	789624	1	3418,	0,
#Partially deleted in new
chr5	140868245	141012344	chr5:140868245-141012344	3	+	140869103	141009937	789624	4	3249,59,89,2718,	0,110703,114229,141381,
#Partially deleted in new
chr5	140871217	141010338	chr5:140871217-141010338	0	+	140871217	141010236	789624	5	277,59,89,102,173,	0,107731,111257,138409,138948,
#Deleted in new
chr5	140875301	140877889	chr5:140875301-140877889	1	+	140875472	140877851	789624	1	2588,	0,
#Deleted in new
chr5	140875345	140875922	chr5:140875345-140875922	3	-	140875345	140875345	8553170	1	577,	0,
#Partially deleted in new
chr5	140875472	141012344	chr5:140875472-141012344	3	+	140875472	141009937	789624	4	2367,59,89,2718,	0,103476,107002,134154,
#Partially deleted in new
chr5	140878072	140882642	chr5:140878072-140882642	3	-	140878072	140878072	8553170	2	27,590,	0,3980,
#Partially deleted in new
chr5	140882207	141012344	chr5:140882207-141012344	3	+	140882268	141010236	789624	5	2455,59,89,102,2179,	0,96741,100267,127419,127958,
#Partially deleted in new
chr5	140882268	141012344	chr5:140882268-141012344	1	+	140882268	141009937	789624	4	2394,59,89,2718,	0,96680,100206,127358,
#Deleted in new
chr5	140882268	140884695	chr5:140882268-140884695	1	+	140882268	140884692	789624	1	2427,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	140926368	140930445	chr5:140926368-140930445	1	+	140926892	140929349	789624	1	4077,	0,
#Partially deleted in new
chr5	140926892	141012344	chr5:140926892-141012344	3	+	140926892	141009937	789624	4	2433,59,89,2718,	0,52056,55582,82734,
#Deleted in new
chr5	140966211	140966490	chr5:140966211-140966490	3	-	140966211	140966211	8553170	1	279,	0,
#Partially deleted in new
chr5	140966234	141012344	chr5:140966234-141012344	3	+	140966766	141009937	789624	4	3097,59,89,2718,	0,12714,16240,43392,
#Deleted in new
chr5	140966469	140969480	chr5:140966469-140969480	1	+	140966766	140969421	789624	1	3011,	0,
#Partially deleted in new
chr5	140982344	141009691	chr5:140982344-141009691	0	+	140982344	140982344	8553170	2	219,65,	0,27282,
#Partially deleted in new
chr5	140988912	141010100	chr5:140988912-141010100	0	+	140988912	140988912	8553170	2	76,474,	0,20714,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	141046259	141062533	chr5:141046259-141062533	1	-	141046259	141046259	8553170	3	307,292,123,	0,4619,16151,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	141050964	141096402	chr5:141050964-141096402	3	-	141050964	141050964	8553170	4	206,101,123,70,	0,6785,11446,45368,
#Partially deleted in new
chr5	141051002	141078024	chr5:141051002-141078024	1	-	141051002	141051002	8553170	3	168,101,248,	0,6747,26774,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	141051134	141059344	chr5:141051134-141059344	3	+	141051470	141053927	789624	1	8210,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	141057777	141078031	chr5:141057777-141078031	0	-	141057777	141057777	8553170	3	73,123,255,	0,4633,19999,
#Partially deleted in new
chr5	141078075	141084481	chr5:141078075-141084481	3	+	141078075	141078075	8553170	3	139,97,198,	0,2343,6208,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	141094577	141098703	chr5:141094577-141098703	3	+	141094790	141097187	789624	1	4126,	0,
#Deleted in new
chr5	141094605	141097264	chr5:141094605-141097264	1	+	141094790	141095338	789624	2	226,2005,	0,654,
#Deleted in new
chr5	141094621	141095581	chr5:141094621-141095581	1	+	141094790	141095338	789624	2	210,355,	0,605,
#Deleted in new
chr5	141094626	141095660	chr5:141094626-141095660	1	+	141094790	141095416	789624	2	205,314,	0,720,
#Deleted in new
chr5	141095581	141096357	chr5:141095581-141096357	1	-	141095581	141095581	8553170	2	505,70,	0,706,
#Deleted in new
chr5	141096833	141097130	chr5:141096833-141097130	0	+	141096833	141097130	789624	2	33,129,	0,168,
#Deleted in new
chr5	141100241	141102213	chr5:141100241-141102213	1	-	141100241	141100241	8553170	2	514,73,	0,1899,
#Partially deleted in new
chr5	141100329	141152370	chr5:141100329-141152370	0	-	141100329	141100329	8553170	2	426,59,	0,51982,
#Partially deleted in new
chr5	141100458	141173522	chr5:141100458-141173522	0	-	141100458	141100458	8553170	3	297,158,49,	0,71974,73015,
#Deleted in new
chr5	141100472	141103827	chr5:141100472-141103827	3	+	141100649	141103040	789624	1	3355,	0,
#Partially deleted in new
chr5	141100704	141174391	chr5:141100704-141174391	3	-	141100704	141100704	8553170	4	51,158,141,65,	0,71728,73212,73622,
#Deleted in new
chr5	141102686	141102983	chr5:141102686-141102983	0	+	141102686	141102983	789624	2	33,129,	0,168,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	141118679	141120765	chr5:141118679-141120765	3	+	141118679	141118679	8553170	1	2086,	0,
#Deleted in new
chr5	141121798	141125623	chr5:141121798-141125623	3	+	141121998	141124386	789624	1	3825,	0,
#Deleted in new
chr5	141121817	141124147	chr5:141121817-141124147	0	+	141121817	141121817	8553170	2	213,993,	0,1337,
#Deleted in new
chr5	141135217	141138625	chr5:141135217-141138625	3	+	141135434	141137822	789624	1	3408,	0,
#Deleted in new
chr5	141135228	141137449	chr5:141135228-141137449	0	+	141136706	141137449	789624	2	61,808,	0,1413,
#Partially deleted in new
chr5	141136682	141241744	chr5:141136682-141241744	3	-	141136682	141136682	8553170	2	501,72,	0,104990,
#Deleted in new
chr5	141150021	141153287	chr5:141150021-141153287	3	+	141150257	141152642	789624	1	3266,	0,
#Deleted in new
chr5	141150101	141152914	chr5:141150101-141152914	1	+	141150665	141152642	789624	2	188,2420,	0,393,
#Deleted in new
chr5	141155995	141158388	chr5:141155995-141158388	5	+	141155995	141155995	16724991	1	2393,	0,
#Deleted in new
chr5	141155995	141159061	chr5:141155995-141159061	7	+	141155995	141155995	16724991	1	3066,	0,
#Deleted in new
chr5	141168230	141168893	chr5:141168230-141168893	3	+	141168230	141168230	8553170	1	663,	0,
#Deleted in new
chr5	141172618	141176383	chr5:141172618-141176383	3	+	141172835	141175217	789624	1	3765,	0,
#Deleted in new
chr5	141177789	141180529	chr5:141177789-141180529	3	+	141178034	141180440	789624	1	2740,	0,
#Partially deleted in new
chr5	141177848	141182369	chr5:141177848-141182369	3	+	141177848	141177848	8553170	2	221,246,	0,4275,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	141181398	141186399	chr5:141181398-141186399	3	+	141182559	141184890	789624	1	5001,	0,
#Deleted in new
chr5	141182402	141184269	chr5:141182402-141184269	0	+	141183603	141184269	789624	2	192,702,	0,1165,
#Partially deleted in new
chr5	141182408	141188582	chr5:141182408-141188582	3	+	141182408	141182408	8553170	3	186,335,45,	0,4610,6129,
#Partially deleted in new
chr5	141182428	141187418	chr5:141182428-141187418	0	+	141182428	141182428	8553170	2	166,400,	0,4590,
#Partially deleted in new
chr5	141183400	141201396	chr5:141183400-141201396	3	-	141183400	141183400	8553170	2	449,131,	0,17865,
#Deleted in new
chr5	141183731	141184461	chr5:141183731-141184461	1	-	141183731	141183731	8553170	2	118,366,	0,364,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	141187126	141191541	chr5:141187126-141191541	3	+	141187318	141189712	789624	1	4415,	0,
#Deleted in new
chr5	141187126	141188808	chr5:141187126-141188808	0	+	141187126	141187126	8553170	2	227,271,	0,1411,
#Deleted in new
chr5	141187206	141188747	chr5:141187206-141188747	0	+	141188527	141188747	789624	2	147,469,	0,1072,
#Deleted in new
chr5	141191598	141194088	chr5:141191598-141194088	3	-	141191598	141191598	8553170	2	353,45,	0,2445,
#Deleted in new
chr5	141192352	141195642	chr5:141192352-141195642	3	+	141192552	141194955	789624	1	3290,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	141199581	141203779	chr5:141199581-141203779	3	+	141199774	141202168	789624	1	4198,	0,
#Deleted in new
chr5	141199609	141202279	chr5:141199609-141202279	1	+	141200869	141202168	789624	2	200,1773,	0,897,
#Deleted in new
chr5	141208696	141211537	chr5:141208696-141211537	1	+	141209918	141211295	789624	2	246,1717,	0,1124,
#Deleted in new
chr5	141208718	141212571	chr5:141208718-141212571	3	+	141208907	141211295	789624	1	3853,	0,
#Deleted in new
chr5	141208718	141211559	chr5:141208718-141211559	1	+	141208907	141209859	789624	2	354,1739,	0,1102,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	141213918	141218979	chr5:141213918-141218979	3	+	141214123	141216520	789624	1	5061,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	141222931	141227759	chr5:141222931-141227759	3	+	141223505	141225902	789624	1	4828,	0,
#Deleted in new
chr5	141223358	141226093	chr5:141223358-141226093	1	+	141223964	141225902	789624	2	182,2185,	0,550,
#Partially deleted in new
chr5	141223371	141245861	chr5:141223371-141245861	3	+	141223505	141245555	789624	2	169,379,	0,22111,
#Deleted in new
chr5	141234332	141237529	chr5:141234332-141237529	7	+	141234332	141234332	16724991	1	3197,	0,
#Deleted in new
chr5	141234374	141235129	chr5:141234374-141235129	4	+	141234374	141234374	16724991	2	211,338,	0,417,
#Deleted in new
chr5	141234550	141236918	chr5:141234550-141236918	5	+	141234550	141234550	16724991	1	2368,	0,
#Deleted in new
chr5	141239922	141242293	chr5:141239922-141242293	5	+	141239922	141239922	16724991	1	2371,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	141240120	141243034	chr5:141240120-141243034	7	+	141240120	141240120	16724991	1	2914,	0,
#Partially deleted in new
chr5	141240738	141245380	chr5:141240738-141245380	0	-	141240738	141240738	8553170	2	305,163,	0,4479,
#Deleted in new
chr5	141240738	141241457	chr5:141240738-141241457	0	-	141240738	141240738	8553170	2	305,50,	0,669,
#Deleted in new
chr5	141240740	141242199	chr5:141240740-141242199	1	-	141240740	141240740	8553170	3	303,235,222,	0,712,1237,
#Deleted in new
chr5	141240843	141242179	chr5:141240843-141242179	0	-	141240843	141240843	8553170	2	200,202,	0,1134,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	141245348	141249365	chr5:141245348-141249365	3	+	141245578	141247942	789624	1	4017,	0,
#Deleted in new
chr5	141245394	141246497	chr5:141245394-141246497	0	+	141245578	141246497	789624	2	219,353,	0,750,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	141259234	141261364	chr5:141259234-141261364	7	+	141259234	141259234	16724991	3	137,569,529,	0,491,1601,
#Partially deleted in new
chr5	141302628	141304045	chr5:141302628-141304045	3	-	141302959	141303865	789624	1	1417,	0,
#Deleted in new
chr5	141318487	141320821	chr5:141318487-141320821	3	-	141318994	141320044	0	1	2334,	0,
#Deleted in new
chr5	141319899	141320781	chr5:141319899-141320781	0	-	141319899	141320044	789624	2	339,264,	0,618,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	141326209	141329357	chr5:141326209-141329357	1	+	141326209	141326209	8553170	1	3148,	0,
#Partially deleted in new
chr5	141326239	141327915	chr5:141326239-141327915	3	+	141326239	141326239	8553170	2	398,146,	0,1530,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	141330570	141334639	chr5:141330570-141334639	1	+	141330684	141333156	789624	1	4069,	0,
#Partially deleted in new
chr5	141330684	141512981	chr5:141330684-141512981	3	+	141330684	141511173	789624	4	2421,59,89,2035,	0,164122,174708,180262,
#Deleted in new
chr5	141338759	141343302	chr5:141338759-141343302	1	+	141338971	141341443	789624	1	4543,	0,
#Partially deleted in new
chr5	141338971	141512979	chr5:141338971-141512979	3	+	141338971	141511173	789624	4	2424,59,89,2033,	0,155835,166421,171975,
#Deleted in new
chr5	141343828	141346523	chr5:141343828-141346523	1	+	141344033	141346523	789624	1	2695,	0,
#Partially deleted in new
chr5	141343867	141512979	chr5:141343867-141512979	3	+	141344033	141511173	789624	4	2590,59,89,2033,	0,150939,161525,167079,
#Partially deleted in new
chr5	141344033	141511183	chr5:141344033-141511183	0	+	141344033	141344454	789624	5	309,2018,59,89,237,	0,406,150773,161359,166913,
#Deleted in new
chr5	141350101	141352693	chr5:141350101-141352693	1	+	141350260	141352693	789624	1	2592,	0,
#Deleted in new
chr5	141350108	141350662	chr5:141350108-141350662	3	-	141350108	141350108	8553170	1	554,	0,
#Partially deleted in new
chr5	141350260	141512979	chr5:141350260-141512979	3	+	141350260	141511173	789624	4	2409,59,89,2033,	0,144546,155132,160686,
#Partially deleted in new
chr5	141355024	141512979	chr5:141355024-141512979	3	+	141355107	141511173	789624	4	2597,59,89,2033,	0,139782,150368,155922,
#Deleted in new
chr5	141355039	141357730	chr5:141355039-141357730	1	+	141355107	141357663	789624	1	2691,	0,
#Deleted in new
chr5	141360041	141362629	chr5:141360041-141362629	1	+	141360135	141362571	789624	1	2588,	0,
#Partially deleted in new
chr5	141360135	141512979	chr5:141360135-141512979	3	+	141360135	141511173	789624	4	2421,59,89,2033,	0,134671,145257,150811,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	141364231	141367783	chr5:141364231-141367783	1	+	141364330	141366772	789624	1	3552,	0,
#Partially deleted in new
chr5	141364330	141512979	chr5:141364330-141512979	3	+	141364330	141511173	789624	4	2421,59,89,2033,	0,130476,141062,146616,
#Partially deleted in new
chr5	141370263	141512979	chr5:141370263-141512979	3	+	141370394	141511173	0	4	2546,59,89,2033,	0,124543,135129,140683,
#Deleted in new
chr5	141370394	141372839	chr5:141370394-141372839	1	+	141370394	141372839	0	1	2445,	0,
#Partially deleted in new
chr5	141373913	141512979	chr5:141373913-141512979	3	+	141374083	141511173	789624	4	2594,59,89,2033,	0,120893,131479,137033,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	141373992	141379642	chr5:141373992-141379642	1	+	141374083	141376540	789624	1	5650,	0,
#Deleted in new
chr5	141382738	141386000	chr5:141382738-141386000	1	+	141382899	141385353	789624	1	3262,	0,
#Partially deleted in new
chr5	141382899	141512979	chr5:141382899-141512979	3	+	141382899	141511173	789624	4	2424,59,89,2033,	0,111907,122493,128047,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	141387697	141392422	chr5:141387697-141392422	1	+	141387884	141390296	789624	1	4725,	0,
#Partially deleted in new
chr5	141387884	141512979	chr5:141387884-141512979	3	+	141387884	141511173	789624	4	2397,59,89,2033,	0,106922,117508,123062,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	141390156	141396636	chr5:141390156-141396636	1	+	141392813	141395276	789624	1	6480,	0,
#Partially deleted in new
chr5	141392813	141512979	chr5:141392813-141512979	3	+	141392813	141511173	789624	4	2424,59,89,2033,	0,101993,112579,118133,
#Deleted in new
chr5	141397986	141400656	chr5:141397986-141400656	1	+	141398127	141400584	789624	1	2670,	0,
#Partially deleted in new
chr5	141398127	141512979	chr5:141398127-141512979	3	+	141398127	141511173	789624	4	2397,59,89,2033,	0,96679,107265,112819,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	141402931	141405499	chr5:141402931-141405499	1	+	141402952	141405439	789624	1	2568,	0,
#Partially deleted in new
chr5	141402952	141512979	chr5:141402952-141512979	3	+	141402952	141511173	789624	4	2424,59,89,2033,	0,91854,102440,107994,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	141408020	141412621	chr5:141408020-141412621	1	+	141408202	141410665	789624	1	4601,	0,
#Partially deleted in new
chr5	141408202	141512979	chr5:141408202-141512979	3	+	141408202	141511173	789624	4	2418,59,89,2033,	0,86604,97190,102744,
#Deleted in new
chr5	141412986	141417448	chr5:141412986-141417448	1	+	141413175	141415728	789624	1	4462,	0,
#Partially deleted in new
chr5	141413175	141512979	chr5:141413175-141512979	3	+	141413175	141511173	789624	4	2436,59,89,2033,	0,81631,92217,97771,
#Deleted in new
chr5	141417644	141420429	chr5:141417644-141420429	1	+	141417859	141420286	789624	1	2785,	0,
#Partially deleted in new
chr5	141417690	141512979	chr5:141417690-141512979	3	+	141417859	141511173	789624	4	2584,59,89,2033,	0,77116,87702,93256,
#Deleted in new
chr5	141421046	141424679	chr5:141421046-141424679	1	+	141421227	141423741	789624	1	3633,	0,
#Partially deleted in new
chr5	141421194	141512979	chr5:141421194-141512979	3	+	141421227	141511173	789624	4	2466,59,89,2033,	0,73612,84198,89752,
#Partially deleted in new
chr5	141421227	141511183	chr5:141421227-141511183	1	+	141421227	141511173	789624	4	1878,59,89,237,	0,73579,84165,89719,
#Deleted in new
chr5	141426285	141428258	chr5:141426285-141428258	5	+	141426285	141426285	16724991	1	1973,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	141426285	141429158	chr5:141426285-141429158	7	+	141426285	141426285	16724991	1	2873,	0,
#Deleted in new
chr5	141427294	141427752	chr5:141427294-141427752	3	-	141427294	141427294	8553170	1	458,	0,
#Deleted in new
chr5	141430588	141433222	chr5:141430588-141433222	1	+	141430759	141433222	789624	1	2634,	0,
#Partially deleted in new
chr5	141430617	141512979	chr5:141430617-141512979	3	+	141430759	141511173	789624	4	2566,59,89,2033,	0,64189,74775,80329,
#Partially deleted in new
chr5	141439852	141442449	chr5:141439852-141442449	7	+	141439852	141439852	16724991	2	312,1985,	0,612,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	141468464	141471528	chr5:141468464-141471528	3	+	141468464	141468464	8553170	2	121,214,	0,2850,
#Deleted in new
chr5	141475946	141478795	chr5:141475946-141478795	1	+	141476116	141478708	789624	1	2849,	0,
#Partially deleted in new
chr5	141475979	141512977	chr5:141475979-141512977	1	+	141476116	141511173	789624	4	167,59,89,2031,	0,18827,29413,34967,
#Deleted in new
chr5	141475995	141477756	chr5:141475995-141477756	0	+	141475995	141475995	8553170	2	151,786,	0,975,
#Deleted in new
chr5	141475998	141477227	chr5:141475998-141477227	0	+	141476116	141477227	789624	2	148,697,	0,532,
#Partially deleted in new
chr5	141476000	141511230	chr5:141476000-141511230	1	+	141476116	141511173	789624	5	146,153,59,89,284,	0,2393,18806,29392,34946,
#Partially deleted in new
chr5	141476002	141512979	chr5:141476002-141512979	3	+	141476116	141511173	789624	4	2544,59,89,2033,	0,18804,29390,34944,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	141476003	141507291	chr5:141476003-141507291	0	+	141476003	141476003	8553170	5	143,153,59,89,188,	0,2390,18803,29389,31100,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	141479315	141479625	chr5:141479315-141479625	3	+	141479315	141479315	8553170	1	310,	0,
#Deleted in new
chr5	141484996	141487789	chr5:141484996-141487789	1	+	141485173	141487789	789624	1	2793,	0,
#Deleted in new
chr5	141485062	141485767	chr5:141485062-141485767	0	+	141485518	141485767	789624	2	123,458,	0,247,
#Partially deleted in new
chr5	141485071	141511496	chr5:141485071-141511496	1	+	141485173	141511173	789624	4	114,59,89,550,	0,9735,20321,25875,
#Partially deleted in new
chr5	141485173	141512979	chr5:141485173-141512979	3	+	141485173	141511173	789624	4	2442,59,89,2033,	0,9633,20219,25773,
#Partially deleted in new
chr5	141489120	141512979	chr5:141489120-141512979	3	+	141489240	141511173	789624	4	2580,59,89,2033,	0,5686,16272,21826,
#Deleted in new
chr5	141489166	141491929	chr5:141489166-141491929	1	+	141489240	141491877	789624	1	2763,	0,
#Partially deleted in new
chr5	141508069	141511527	chr5:141508069-141511527	0	+	141508069	141508069	8553170	2	214,581,	0,2877,
#Partially deleted in new
chr5	141515015	141619055	chr5:141515015-141619055	3	-	141516850	141618914	789624	28	1993,87,136,165,125,130,240,102,95,99,9,115,717,180,65,116,117,119,111,109,140,64,87,131,102,156,27,258,	0,9127,11022,11281,12557,13437,13686,14156,14587,19319,56412,56910,58476,59951,61214,61740,62459,63209,63499,64072,65728,67296,68190,68469,69108,72026,73208,103782,
#Partially deleted in new
chr5	141515015	141524755	chr5:141515015-141524755	0	-	141515015	141515015	8553170	2	1993,613,	0,9127,
#Partially deleted in new
chr5	141515020	141619055	chr5:141515020-141619055	1	-	141516969	141618914	789624	29	1988,53,87,136,165,125,130,240,102,95,99,9,115,717,180,65,116,117,119,111,109,140,64,87,131,102,156,27,258,	0,3923,9122,11017,11276,12552,13432,13681,14151,14582,19314,56407,56905,58471,59946,61209,61735,62454,63204,63494,64067,65723,67291,68185,68464,69103,72021,73203,103777,
#Partially deleted in new
chr5	141515021	141619055	chr5:141515021-141619055	1	-	141516850	141588235	789624	28	1987,87,136,163,127,130,240,102,95,99,9,115,717,180,65,116,117,119,111,109,140,64,87,131,102,156,27,258,	0,9121,11016,11275,12549,13431,13680,14150,14581,19313,35477,56904,58470,59945,61208,61734,62453,63203,63493,64066,65722,67290,68184,68463,69102,72020,73202,103776,
#Partially deleted in new
chr5	141515021	141619055	chr5:141515021-141619055	1	-	141516850	141618914	789624	26	1987,87,136,165,125,130,240,102,95,108,115,717,180,65,116,117,119,111,109,140,64,87,131,102,156,258,	0,9121,11016,11275,12551,13431,13680,14150,14581,19313,56904,58470,59945,61208,61734,62453,63203,63493,64066,65722,67290,68184,68463,69102,72020,103776,
#Partially deleted in new
chr5	141515021	141619055	chr5:141515021-141619055	1	-	141516850	141618914	789624	27	1987,87,136,165,125,130,240,102,95,108,115,717,180,65,116,117,119,111,109,140,64,87,131,102,156,27,258,	0,9121,11016,11275,12551,13431,13680,14150,14581,19313,56904,58470,59945,61208,61734,62453,63203,63493,64066,65722,67290,68184,68463,69102,72020,73202,103776,
#Partially deleted in new
chr5	141515054	141524510	chr5:141515054-141524510	1	-	141516850	141524209	789624	3	1954,87,49,	0,9088,9407,
#Partially deleted in new
chr5	141515974	141618914	chr5:141515974-141618914	1	-	141516850	141618914	789624	27	1034,87,136,165,125,130,240,102,95,99,9,115,717,180,65,116,117,119,111,109,140,64,87,131,102,156,117,	0,8168,10063,10322,11598,12478,12727,13197,13628,18360,55453,55951,57517,58992,60255,60781,61500,62250,62540,63113,64769,66337,67231,67510,68149,71067,102823,
#Partially deleted in new
chr5	141516571	141524770	chr5:141516571-141524770	1	-	141516850	141524209	789624	3	437,87,95,	0,7571,8104,
#Partially deleted in new
chr5	141516624	141524730	chr5:141516624-141524730	1	-	141516850	141524209	789624	3	384,87,112,	0,7518,7994,
#Partially deleted in new
chr5	141528543	141560701	chr5:141528543-141560701	0	-	141528543	141528543	8553170	5	39,240,102,99,77,	0,158,628,5791,32081,
#Partially deleted in new
chr5	141528544	141534488	chr5:141528544-141534488	0	-	141528544	141528544	8553170	5	38,240,102,95,154,	0,157,627,1058,5790,
#Partially deleted in new
chr5	141528799	141557854	chr5:141528799-141557854	0	-	141528799	141528799	8553170	5	142,102,95,99,108,	0,372,803,5535,28947,
#Deleted in new
chr5	141558310	141565263	chr5:141558310-141565263	3	+	141558310	141558310	789624	3	177,104,2199,	0,3491,4754,
#Partially deleted in new
chr5	141577492	141618999	chr5:141577492-141618999	0	-	141580794	141618914	789624	11	99,119,111,109,62,62,131,102,156,27,202,	0,732,1022,1595,3251,5738,5992,6631,9549,10731,41305,
#Deleted in new
chr5	141577988	141579129	chr5:141577988-141579129	0	-	141577988	141577988	8553170	3	355,111,42,	0,526,1099,
#Partially deleted in new
chr5	141583518	141587485	chr5:141583518-141587485	0	-	141583518	141583518	8553170	4	97,102,156,206,	0,605,3523,3761,
#Deleted in new
chr5	141588934	141589142	chr5:141588934-141589142	7	+	141588934	141588934	16724991	1	208,	0,
#Partially deleted in new
chr5	141618413	141626481	chr5:141618413-141626481	3	+	141618413	141618413	8553170	3	76,119,426,	0,7433,7642,
#Partially deleted in new
chr5	141620875	141636870	chr5:141620875-141636870	3	-	141621467	141636790	0	15	662,158,80,59,90,65,74,81,134,56,57,82,143,83,135,	0,4332,4809,5137,5318,7017,7238,7683,8297,8808,8984,9168,13935,15672,15860,
#Partially deleted in new
chr5	141620875	141635164	chr5:141620875-141635164	0	-	141620875	141620875	8553170	13	662,158,80,59,90,65,74,81,134,56,57,82,354,	0,4332,4809,5137,5318,7017,7238,7683,8297,8808,8984,9168,13935,
#Partially deleted in new
chr5	141620924	141626070	chr5:141620924-141626070	0	-	141620924	141620924	8553170	3	613,158,58,	0,4283,5088,
#Partially deleted in new
chr5	141621484	141628562	chr5:141621484-141628562	0	-	141621484	141621484	8553170	7	53,158,80,90,65,74,4,	0,3723,4200,4709,6408,6629,7074,
#Partially deleted in new
chr5	141624861	141627936	chr5:141624861-141627936	0	-	141624861	141624861	8553170	5	504,80,59,90,44,	0,823,1151,1332,3031,
#Deleted in new
chr5	141625207	141626485	chr5:141625207-141626485	0	-	141625207	141625207	8553170	3	158,80,473,	0,477,805,
#Partially deleted in new
chr5	141625700	141629972	chr5:141625700-141629972	0	-	141625700	141625700	8553170	6	64,90,65,74,81,289,	0,493,2192,2413,2858,3983,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	141625749	141629258	chr5:141625749-141629258	0	-	141625749	141625749	8553170	5	15,90,65,526,86,	0,444,2143,2364,3423,
#Deleted in new
chr5	141626025	141626444	chr5:141626025-141626444	0	-	141626025	141626025	8553170	2	46,251,	0,168,
#Partially deleted in new
chr5	141626232	141636833	chr5:141626232-141636833	0	-	141626232	141636790	789624	9	51,65,74,81,134,56,57,83,98,	0,1660,1881,2326,2940,3451,3627,10315,10503,
#Partially deleted in new
chr5	141627891	141636838	chr5:141627891-141636838	0	-	141630101	141636790	789624	9	66,74,81,134,56,57,82,83,103,	0,222,667,1281,1792,1968,2152,8656,8844,
#Partially deleted in new
chr5	141627898	141629224	chr5:141627898-141629224	0	-	141627898	141627898	8553170	3	289,81,52,	0,660,1274,
#Partially deleted in new
chr5	141628558	141636825	chr5:141628558-141636825	0	-	141628558	141628558	8553170	6	81,134,266,143,83,90,	0,614,1301,6252,7989,8177,
#Deleted in new
chr5	141628604	141629742	chr5:141628604-141629742	0	-	141628604	141628604	8553170	2	35,570,	0,568,
#Partially deleted in new
chr5	141629265	141634856	chr5:141629265-141634856	0	-	141629265	141629265	8553170	3	41,442,46,	0,418,5545,
#Deleted in new
chr5	141635908	141636843	chr5:141635908-141636843	0	-	141635908	141635908	8553170	2	722,108,	0,827,
#Deleted in new
chr5	141636949	141641063	chr5:141636949-141641063	3	+	141638225	141640444	789624	8	792,240,66,67,186,376,34,393,	0,1220,1845,2005,2514,2970,3462,3721,
#Deleted in new
chr5	141636949	141641063	chr5:141636949-141641063	0	+	141636949	141636949	8553170	5	1460,66,376,34,393,	0,1845,2970,3462,3721,
#Deleted in new
chr5	141637004	141641064	chr5:141637004-141641064	0	+	141637004	141637004	8553170	6	1405,66,186,376,34,394,	0,1790,2459,2915,3407,3666,
#Deleted in new
chr5	141637011	141641018	chr5:141637011-141641018	1	+	141638808	141640688	789624	6	737,66,67,186,376,348,	0,1783,1943,2452,2908,3659,
#Deleted in new
chr5	141637025	141641077	chr5:141637025-141641077	1	+	141638225	141640444	789624	7	1384,66,67,186,376,34,407,	0,1769,1929,2438,2894,3386,3645,
#Deleted in new
chr5	141637436	141639629	chr5:141637436-141639629	0	+	141637436	141637436	8553170	5	305,240,66,67,166,	0,733,1358,1518,2027,
#Deleted in new
chr5	141637441	141641053	chr5:141637441-141641053	1	+	141638808	141640444	789624	7	307,66,67,186,376,34,383,	0,1353,1513,2022,2478,2970,3229,
#Partially deleted in new
chr5	141639301	141651419	chr5:141639301-141651419	3	-	141641497	141651368	789624	20	2262,56,88,221,118,84,129,162,105,120,96,123,129,64,137,142,68,46,98,72,	0,2400,3699,4916,5271,5557,5718,6469,6785,7301,7833,8096,8666,9655,9870,10093,10585,11057,11718,12046,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	141639302	141642621	chr5:141639302-141642621	0	-	141639302	141639302	8553170	2	2261,920,	0,2399,
#Partially deleted in new
chr5	141639307	141647483	chr5:141639307-141647483	0	-	141639307	141639307	8553170	11	2256,56,88,221,118,84,129,162,636,96,86,	0,2394,3693,4910,5265,5551,5712,6463,6779,7827,8090,
#Partially deleted in new
chr5	141640981	141651117	chr5:141640981-141651117	0	-	141644920	141649897	789624	19	582,56,107,221,118,80,129,162,105,120,96,123,129,64,137,136,68,46,98,	0,720,1415,3236,3591,3877,4038,4789,5105,5621,6153,6416,6986,7975,8190,8413,8905,9377,10038,
#Partially deleted in new
chr5	141640986	141651376	chr5:141640986-141651376	1	-	141642435	141651368	789624	20	577,56,107,88,221,118,84,129,51,120,96,123,129,64,137,136,68,46,98,29,	0,715,1410,2014,3231,3586,3872,4033,4784,5616,6148,6411,6981,7970,8185,8408,8900,9372,10033,10361,
#Partially deleted in new
chr5	141641208	141642704	chr5:141641208-141642704	0	-	141641208	141641208	8553170	3	355,56,308,	0,493,1188,
#Deleted in new
chr5	141644629	141646364	chr5:141644629-141646364	0	-	141644629	141646284	789624	5	61,84,129,162,278,	0,229,390,1141,1457,
#Deleted in new
chr5	141646507	141647529	chr5:141646507-141647529	0	-	141646507	141646507	8553170	3	215,96,132,	0,627,890,
#Deleted in new
chr5	141646671	141647831	chr5:141646671-141647831	0	-	141646671	141646671	8553170	3	51,96,434,	0,463,726,
#Partially deleted in new
chr5	141647883	141651387	chr5:141647883-141651387	1	-	141647898	141651368	789624	8	213,64,137,136,68,46,98,40,	0,1073,1288,1511,2003,2475,3136,3464,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr5	141653400	141682221	chr5:141653400-141682221	3	-	141653949	141680486	0	33	1035,39,138,64,36,83,134,129,115,75,69,148,106,213,164,64,220,103,142,117,136,183,86,200,107,185,121,70,204,112,62,541,49,	0,1961,2220,2468,2663,2793,3103,3317,4964,5178,6007,6378,8283,8642,11521,11910,13023,16308,16521,17111,17864,18169,18494,18701,19151,19340,19612,20000,20204,26144,26360,26562,28772,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr5	141653400	141682203	chr5:141653400-141682203	1	-	141653949	141680252	789624	32	1035,39,138,64,36,83,134,129,115,75,69,148,106,164,64,220,103,142,117,76,183,86,200,107,185,121,70,204,112,62,509,31,	0,1961,2220,2468,2663,2793,3103,3317,4964,5178,6007,6378,8283,11521,11910,13023,16308,16521,17111,17924,18169,18494,18701,19151,19340,19612,20000,20204,26144,26360,26562,28772,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr5	141653402	141680505	chr5:141653402-141680505	1	-	141653949	141680252	789624	31	1033,39,138,64,36,83,134,129,115,75,69,148,106,164,64,220,103,142,117,76,183,86,200,107,185,121,70,204,112,62,543,	0,1959,2218,2466,2661,2791,3101,3315,4962,5176,6005,6376,8281,11519,11908,13021,16306,16519,17109,17922,18167,18492,18699,19149,19338,19610,19998,20202,26142,26358,26560,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr5	141653407	141666744	chr5:141653407-141666744	0	-	141653407	141653407	8553170	16	1028,39,138,64,36,83,134,129,115,75,69,148,572,164,64,321,	0,1954,2213,2461,2656,2786,3096,3310,4957,5171,6000,6371,8276,11514,11903,13016,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr5	141653790	141673160	chr5:141653790-141673160	1	-	141653949	141673091	0	26	645,138,64,36,83,134,129,115,75,69,148,106,213,164,64,220,103,142,117,136,183,86,200,107,185,148,	0,1830,2078,2273,2403,2713,2927,4574,4788,5617,5988,7893,8252,11131,11520,12633,15918,16131,16721,17474,17779,18104,18311,18761,18950,19222,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	141672266	141680831	chr5:141672266-141680831	0	-	141672266	141680486	789624	9	35,107,185,121,70,204,112,62,869,	0,285,474,746,1134,1338,7278,7494,7696,
#Deleted in new
chr5	141672767	141673387	chr5:141672767-141673387	0	-	141672767	141672767	8553170	2	158,375,	0,245,
#Deleted in new
chr5	141825707	141826325	chr5:141825707-141826325	3	-	141825707	141825707	8553170	1	618,	0,
#Partially deleted in new
chr5	141853110	141878410	chr5:141853110-141878410	3	-	141854041	141878262	789624	5	1326,220,2196,863,188,	0,4141,10121,15458,25112,
#Partially deleted in new
chr5	141853372	141878409	chr5:141853372-141878409	1	-	141856236	141878262	789624	5	1064,39,220,863,187,	0,2851,3879,15196,24850,
#Partially deleted in new
chr5	141862651	141878410	chr5:141862651-141878410	1	-	141863147	141878262	789624	3	2776,863,188,	0,5917,15571,
#Deleted in new
chr5	141862884	141866202	chr5:141862884-141866202	0	-	141862884	141862884	8553170	2	2543,131,	0,3187,
#Partially deleted in new
chr5	141863012	141868575	chr5:141863012-141868575	0	-	141868523	141868575	789624	2	2415,74,	0,5489,
#Partially deleted in new
chr5	141863056	141869589	chr5:141863056-141869589	0	-	141863056	141863056	8553170	3	2371,863,73,	0,5512,6460,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	141865061	141868882	chr5:141865061-141868882	0	-	141867548	141868882	789624	3	366,145,314,	0,2408,3507,
#Partially deleted in new
chr5	141868953	141879246	chr5:141868953-141879246	0	-	141868953	141869405	789624	2	478,75,	0,10218,
#Partially deleted in new
chr5	141896167	141896689	chr5:141896167-141896689	7	-	141896167	141896167	16724991	1	522,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	141923807	141942047	chr5:141923807-141942047	3	+	141923941	141938759	789624	12	165,115,118,148,159,86,97,143,159,93,160,3527,	0,773,1602,4343,5774,6181,6370,9451,10432,10686,13390,14713,
#Partially deleted in new
chr5	141923854	141940120	chr5:141923854-141940120	1	+	141923941	141938759	789624	13	118,115,118,148,159,86,97,143,159,93,160,240,567,	0,726,1555,4296,5727,6134,6323,9404,10385,10639,13343,14666,15699,
#Partially deleted in new
chr5	141923909	141934326	chr5:141923909-141934326	0	+	141923941	141934326	789624	9	63,115,118,148,159,86,97,143,69,	0,671,1500,4241,5672,6079,6268,9349,10348,
#Partially deleted in new
chr5	141930246	141934996	chr5:141930246-141934996	0	+	141930246	141930246	8553170	4	28,143,159,503,	0,3012,3993,4247,
#Partially deleted in new
chr5	141931218	141933882	chr5:141931218-141933882	0	+	141931218	141931218	8553170	2	62,624,	0,2040,
#Partially deleted in new
chr5	141934239	141940146	chr5:141934239-141940146	0	+	141934239	141938759	789624	6	159,93,160,240,49,641,	0,254,2958,4281,4616,5266,
#Partially deleted in new
chr5	141937073	141938948	chr5:141937073-141938948	0	+	141937073	141937073	8553170	2	284,428,	0,1447,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	141943584	141959062	chr5:141943584-141959062	3	-	141945380	141957851	789624	4	2221,152,98,4091,	0,5847,7908,11387,
#Deleted in new
chr5	141952418	141953375	chr5:141952418-141953375	3	+	141952418	141952418	8553170	1	957,	0,
#Deleted in new
chr5	141957780	141958812	chr5:141957780-141958812	0	-	141957780	141957851	789624	2	465,107,	0,925,
#Partially deleted in new
chr5	141958036	141969741	chr5:141958036-141969741	0	-	141958036	141958036	8553170	3	209,124,134,	0,5054,11571,
#Partially deleted in new
chr5	141958327	141978830	chr5:141958327-141978830	0	+	141973588	141978830	789624	4	98,160,152,528,	0,15255,16476,19975,
#Partially deleted in new
chr5	141958336	141978394	chr5:141958336-141978394	0	+	141973588	141978394	789624	5	89,174,160,152,92,	0,12367,15246,16467,19966,
#Partially deleted in new
chr5	141966819	141974947	chr5:141966819-141974947	0	+	141973588	141974947	789624	4	85,174,160,144,	0,3884,6763,7984,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	141966836	141990290	chr5:141966836-141990290	1	+	141973588	141987790	789624	8	68,160,152,528,229,173,131,2558,	0,6746,7967,11466,13286,16543,17966,20896,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	141966836	141990290	chr5:141966836-141990290	3	+	141973588	141987790	789624	9	68,174,160,152,528,229,173,131,2558,	0,3867,6746,7967,11466,13286,16543,17966,20896,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	141968885	141990290	chr5:141968885-141990290	1	+	141973588	141987790	789624	8	282,160,152,528,229,173,131,2558,	0,4697,5918,9417,11237,14494,15917,18847,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	141969038	141990291	chr5:141969038-141990291	1	+	141973588	141987790	789624	9	129,174,160,152,528,229,173,131,2559,	0,1665,4544,5765,9264,11084,14341,15764,18694,
#Partially deleted in new
chr5	141969094	141980277	chr5:141969094-141980277	0	+	141969094	141969094	8553170	4	73,174,160,155,	0,1609,4488,11028,
#Partially deleted in new
chr5	141969103	141978762	chr5:141969103-141978762	0	+	141969103	141969103	8553170	3	64,160,460,	0,4479,9199,
#Partially deleted in new
chr5	141969104	141978509	chr5:141969104-141978509	0	+	141973588	141978509	789624	4	63,160,152,207,	0,4478,5699,9198,
#Partially deleted in new
chr5	141969110	141989185	chr5:141969110-141989185	1	+	141978374	141987790	789624	8	57,174,160,528,229,173,131,1453,	0,1593,4472,9192,11012,14269,15692,18622,
#Partially deleted in new
chr5	141969135	141984933	chr5:141969135-141984933	0	+	141973588	141984933	789624	5	32,174,160,173,131,	0,1568,4447,14244,15667,
#Partially deleted in new
chr5	141969150	141983552	chr5:141969150-141983552	0	+	141973588	141980163	789624	5	17,174,160,229,173,	0,1553,4432,10972,14229,
#Partially deleted in new
chr5	141969156	141978553	chr5:141969156-141978553	0	+	141973588	141978553	789624	5	78,174,160,152,251,	0,1547,4426,5647,9146,
#Partially deleted in new
chr5	141969268	141973634	chr5:141969268-141973634	0	+	141973588	141973634	789624	3	349,174,52,	0,1435,4314,
#Partially deleted in new
chr5	141969276	141974833	chr5:141969276-141974833	0	+	141973588	141974833	789624	4	109,174,160,30,	0,1427,4306,5527,
#Partially deleted in new
chr5	141991748	142013027	chr5:141991748-142013027	1	-	141991864	142012035	789624	7	172,175,185,183,102,130,33,	0,11339,13183,14395,16050,20163,21246,
#Partially deleted in new
chr5	142000668	142013031	chr5:142000668-142013031	3	-	142002028	142012035	0	7	1461,175,185,183,102,130,37,	0,2419,4263,5475,7130,11243,12326,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	142000673	142013030	chr5:142000673-142013030	1	-	142002028	142012035	0	8	1456,175,185,183,102,130,52,36,	0,2414,4258,5470,7125,11238,11614,12321,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	142000677	142012973	chr5:142000677-142012973	1	-	142002028	142012035	0	8	1452,175,185,183,102,130,90,305,	0,2410,4254,5466,7121,11234,11610,11991,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	142000677	142012794	chr5:142000677-142012794	1	-	142002028	142012035	0	6	1452,175,185,183,102,883,	0,2410,4254,5466,7121,11234,
#Partially deleted in new
chr5	142002085	142013031	chr5:142002085-142013031	0	-	142002085	142012035	789624	7	44,127,131,183,102,130,37,	0,1002,2900,4058,5713,9826,10909,
#Partially deleted in new
chr5	142002089	142013041	chr5:142002089-142013041	0	-	142002089	142012035	789624	7	40,175,185,183,102,193,47,	0,998,2842,4054,5709,9759,10905,
#Deleted in new
chr5	142003217	142005441	chr5:142003217-142005441	0	-	142003217	142003217	8553170	2	45,510,	0,1714,
#Deleted in new
chr5	142004874	142006314	chr5:142004874-142006314	0	-	142004874	142004874	8553170	2	242,171,	0,1269,
#Partially deleted in new
chr5	142005043	142012996	chr5:142005043-142012996	0	-	142005043	142012035	789624	5	73,183,102,130,82,	0,1100,2755,6868,7871,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	142005111	142013027	chr5:142005111-142013027	0	-	142005111	142012035	789624	6	5,183,102,130,90,33,	0,1032,2687,6800,7176,7883,
#Partially deleted in new
chr5	142006035	142013027	chr5:142006035-142013027	0	-	142006035	142006035	8553170	4	291,102,130,33,	0,1763,5876,6959,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	142011948	142012996	chr5:142011948-142012996	0	-	142011948	142012035	789624	3	93,52,328,	0,339,720,
#Partially deleted in new
chr5	142036706	142037125	chr5:142036706-142037125	7	-	142036706	142036706	16724991	1	419,	0,
#Partially deleted in new
chr5	142108504	142154443	chr5:142108504-142154443	3	+	142108974	142144674	789624	8	533,88,131,88,125,67,106,2713,	0,23303,23707,27225,29229,32058,36066,43226,
#Partially deleted in new
chr5	142108787	142134068	chr5:142108787-142134068	0	+	142108787	142108787	8553170	3	250,299,35,	0,23020,25246,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	142135729	142138192	chr5:142135729-142138192	0	+	142135729	142135729	8553170	2	88,459,	0,2004,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	142142977	142154195	chr5:142142977-142154195	0	+	142142977	142142977	8553170	2	1699,2465,	0,8753,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	142165766	142168387	chr5:142165766-142168387	3	+	142165766	142165766	8553170	1	2621,	0,
#Partially deleted in new
chr5	142310426	142325001	chr5:142310426-142325001	1	-	142314208	142319765	789624	3	4729,51,158,	0,9317,14417,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	142310441	142315790	chr5:142310441-142315790	0	-	142310441	142310441	8553170	1	5349,	0,
#Partially deleted in new
chr5	142312973	142325040	chr5:142312973-142325040	3	-	142314208	142315108	0	2	2182,197,	0,11870,
#Partially deleted in new
chr5	142314957	142324182	chr5:142314957-142324182	0	-	142314957	142315108	789624	3	198,62,293,	0,4775,8932,
#Partially deleted in new
chr5	142315108	142324417	chr5:142315108-142324417	0	-	142315108	142315108	8553170	2	47,528,	0,8781,
#Deleted in new
chr5	142317829	142317920	chr5:142317829-142317920	3	+	142317829	142317829	8553170	1	91,	0,
#Deleted in new
chr5	142318046	142318167	chr5:142318046-142318167	3	+	142318046	142318046	8553170	1	121,	0,
#Deleted in new
chr5	142324898	142326455	chr5:142324898-142326455	0	-	142324898	142324898	8553170	2	132,414,	0,1143,
#Partially deleted in new
chr5	142325292	142464054	chr5:142325292-142464054	1	+	142325292	142325292	789624	4	78,70,358,85,	0,20123,27933,138677,
#Partially deleted in new
chr5	142325297	142353621	chr5:142325297-142353621	1	+	142325297	142325297	8553170	3	73,70,396,	0,20118,27928,
#Partially deleted in new
chr5	142353542	142375654	chr5:142353542-142375654	1	+	142353542	142353542	8553170	3	41,58,53,	0,14286,22059,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	142404200	142672001	chr5:142404200-142672001	3	+	142404200	142404200	8553170	4	153,90,113,210,	0,59769,177601,267591,
#Partially deleted in new
chr5	142404217	142530130	chr5:142404217-142530130	0	+	142404217	142404217	8553170	3	136,90,136,	0,59752,125777,
#Deleted in new
chr5	142566699	142567076	chr5:142566699-142567076	7	+	142566699	142566699	16724991	1	377,	0,
#Partially deleted in new
chr5	142581847	142627190	chr5:142581847-142627190	1	+	142581847	142581847	8553170	2	67,454,	0,44889,
#Partially deleted in new
chr5	142592177	142621342	chr5:142592177-142621342	1	-	142595289	142614127	0	4	3307,104,203,46,	0,8524,21781,29119,
#Partially deleted in new
chr5	142592178	142644301	chr5:142592178-142644301	1	-	142595289	142614127	0	4	3306,104,203,189,	0,8523,21780,51934,
#Partially deleted in new
chr5	142592178	142686495	chr5:142592178-142686495	1	-	142595289	142614127	0	5	3306,104,203,132,60,	0,8523,21780,93778,94257,
#Partially deleted in new
chr5	142592178	142685703	chr5:142592178-142685703	1	-	142595289	142614127	0	4	3306,104,203,205,	0,8523,21780,93320,
#Partially deleted in new
chr5	142592178	142698070	chr5:142592178-142698070	3	-	142595289	142614127	0	4	3306,104,203,449,	0,8523,21780,105443,
#Partially deleted in new
chr5	142593368	142685672	chr5:142593368-142685672	1	-	142595289	142614127	0	4	2116,104,203,159,	0,7333,20590,92145,
#Partially deleted in new
chr5	142594751	142686385	chr5:142594751-142686385	1	-	142595289	142614127	0	4	733,104,203,429,	0,5950,19207,91205,
#Partially deleted in new
chr5	142595087	142686051	chr5:142595087-142686051	1	-	142595470	142614127	0	3	397,203,95,	0,18871,90869,
#Partially deleted in new
chr5	142595160	142698052	chr5:142595160-142698052	0	-	142595160	142595160	8553170	3	324,203,431,	0,18798,102461,
#Partially deleted in new
chr5	142595230	142698021	chr5:142595230-142698021	1	-	142595470	142614127	789624	5	254,99,203,94,109,	0,5471,18728,102391,102682,
#Partially deleted in new
chr5	142595230	142698052	chr5:142595230-142698052	0	-	142595230	142595230	8553170	4	254,104,203,431,	0,5471,18728,102391,
#Partially deleted in new
chr5	142595242	142698046	chr5:142595242-142698046	1	-	142595289	142614127	0	4	242,104,203,134,	0,5459,18716,102670,
#Partially deleted in new
chr5	142595242	142698046	chr5:142595242-142698046	0	-	142595289	142614127	0	5	242,104,203,94,134,	0,5459,18716,102379,102670,
#Partially deleted in new
chr5	142595242	142698052	chr5:142595242-142698052	0	-	142595242	142595242	8553170	3	242,104,45,	0,5459,102765,
#Partially deleted in new
chr5	142600799	142644201	chr5:142600799-142644201	0	-	142600799	142614127	789624	3	6,203,89,	0,13159,43313,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	142614004	142686066	chr5:142614004-142686066	0	-	142614004	142614127	789624	4	157,144,139,110,	0,65919,66706,71952,
#Deleted in new
chr5	142703781	142705421	chr5:142703781-142705421	3	+	142703781	142703781	8553170	1	1640,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	142745599	142760998	chr5:142745599-142760998	3	+	142745599	142745599	789624	4	119,97,108,1913,	0,11134,12227,13486,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr5	142770376	143229011	chr5:142770376-143229011	3	+	142770761	143222446	0	23	539,96,62,72,102,111,105,130,101,95,79,37,66,75,88,59,106,160,139,151,276,92,6654,	0,103023,104733,108997,114921,123861,131558,133163,137327,142822,161670,243703,266819,271439,284062,285651,287265,350611,363590,376854,436821,443620,451981,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr5	142770406	143229011	chr5:142770406-143229011	1	+	142770761	143222446	0	23	509,96,62,72,102,111,105,130,101,95,79,37,66,75,88,59,106,160,139,151,276,92,6654,	0,102993,104703,108967,114891,123831,131528,133133,137297,142792,161640,243673,266789,271409,284032,285621,287235,350581,363560,376824,436791,443590,451951,
#Partially deleted in new
chr5	142770406	143223194	chr5:142770406-143223194	1	+	142770761	143222446	0	23	509,96,62,72,102,111,105,130,101,95,79,37,66,75,88,59,106,160,139,151,111,92,837,	0,102993,104703,108967,114891,123831,131528,133133,137297,142792,161640,243673,266789,271409,284032,285621,287235,350581,363560,376824,436791,443590,451951,
#Partially deleted in new
chr5	142771118	143224097	chr5:142771118-143224097	1	+	142771329	143222446	789624	22	257,96,62,72,102,111,105,130,101,95,79,37,66,75,88,59,106,160,139,151,92,1740,	0,102281,103991,108255,114179,123119,130816,132421,136585,142080,160928,242961,266077,270697,283320,284909,286523,349869,362848,376112,442878,451239,
#Partially deleted in new
chr5	142772716	142894335	chr5:142772716-142894335	0	+	142772716	142772716	8553170	6	134,96,62,72,102,98,	0,100683,102393,106657,112581,121521,
#Partially deleted in new
chr5	142903643	142922114	chr5:142903643-142922114	0	+	142903643	142903643	8553170	4	26,101,95,584,	0,4060,9555,17887,
#Partially deleted in new
chr5	142907321	143037223	chr5:142907321-143037223	0	+	142907768	143037223	789624	6	187,101,95,79,37,28,	0,382,5877,24725,106758,129874,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	142907360	142932125	chr5:142907360-142932125	0	+	142907360	142907360	8553170	5	148,101,95,143,79,	0,343,5838,8181,24686,
#Partially deleted in new
chr5	142907577	143056036	chr5:142907577-143056036	0	+	142907768	143056036	789624	8	227,95,79,37,66,75,88,9,	0,5621,24469,106502,129618,134238,146861,148450,
#Partially deleted in new
chr5	142908721	143041890	chr5:142908721-143041890	0	+	142908721	142908721	8553170	6	161,95,79,37,66,75,	0,4477,23325,105358,128474,133094,
#Deleted in new
chr5	142946568	142947105	chr5:142946568-142947105	3	-	142946568	142946568	8553170	1	537,	0,
#Partially deleted in new
chr5	142969330	143054526	chr5:142969330-143054526	0	+	142969330	142969330	8553170	5	78,214,66,75,88,	0,44749,67865,72485,85108,
#Partially deleted in new
chr5	143010735	143014397	chr5:143010735-143014397	0	+	143010735	143010735	8553170	2	238,318,	0,3344,
#Partially deleted in new
chr5	143014079	143041714	chr5:143014079-143041714	0	+	143014079	143014079	8553170	3	37,66,190,	0,23116,27445,
#Partially deleted in new
chr5	143037195	143224150	chr5:143037195-143224150	0	+	143037195	143222446	789624	12	66,75,88,59,106,160,139,151,111,30,92,1793,	0,4620,17243,18832,20446,83792,96771,110035,170002,170248,176801,185162,
#Partially deleted in new
chr5	143054438	143223194	chr5:143054438-143223194	0	+	143054438	143222446	789624	8	88,59,106,160,139,151,92,837,	0,1589,3203,66549,79528,92792,159558,167919,
#Deleted in new
chr5	143056082	143058159	chr5:143056082-143058159	0	+	143056082	143058041	789624	3	4,106,302,	0,1559,1775,
#Partially deleted in new
chr5	143121111	143222413	chr5:143121111-143222413	0	+	143121111	143207440	789624	6	36,139,151,91,92,56,	0,12855,26119,86271,92885,101246,
#Partially deleted in new
chr5	143121114	143207473	chr5:143121114-143207473	0	+	143121114	143166087	789624	6	33,139,151,71,74,91,	0,12852,26116,44912,51844,86268,
#Partially deleted in new
chr5	143133984	143147516	chr5:143133984-143147516	0	+	143133984	143133984	8553170	2	121,286,	0,13246,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	143164912	143226485	chr5:143164912-143226485	0	+	143164912	143164912	8553170	3	532,92,4128,	0,49084,57445,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	143168554	143203737	chr5:143168554-143203737	0	+	143168554	143168554	8553170	4	416,1190,197,1507,	0,919,4404,33676,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	143192499	143194166	chr5:143192499-143194166	3	+	143192499	143192499	789624	2	133,255,	0,1412,
#Partially deleted in new
chr5	143207197	143216601	chr5:143207197-143216601	0	+	143207197	143216281	789624	3	276,92,415,	0,6799,8989,
#Partially deleted in new
chr5	143207199	143216770	chr5:143207199-143216770	0	+	143207199	143216281	789624	3	109,89,584,	0,6797,8987,
#Partially deleted in new
chr5	143277930	143435512	chr5:143277930-143435512	3	-	143281888	143400839	0	9	4111,158,131,145,279,117,167,1197,981,	0,4637,17529,20737,22554,32166,36071,121725,156601,
#Partially deleted in new
chr5	143277930	143403700	chr5:143277930-143403700	1	-	143281888	143400839	0	9	4111,158,131,145,279,117,167,1197,490,	0,4637,17529,20737,22554,32166,36071,121725,125280,
#Partially deleted in new
chr5	143277935	143403329	chr5:143277935-143403329	1	-	143279363	143400839	0	9	1476,158,131,145,279,117,167,1197,119,	0,4632,17524,20732,22549,32161,36066,121720,125275,
#Partially deleted in new
chr5	143279566	143400852	chr5:143279566-143400852	1	-	143281888	143400839	0	9	2475,158,131,145,279,117,167,169,950,	0,3001,15893,19101,20918,30530,34435,120089,120336,
#Partially deleted in new
chr5	143281119	143434702	chr5:143281119-143434702	1	-	143281888	143400839	0	10	922,158,131,145,279,117,170,1197,99,171,	0,1448,14340,17548,19365,28977,32879,118536,152599,153412,
#Partially deleted in new
chr5	143281137	143404129	chr5:143281137-143404129	1	-	143281888	143400839	0	9	904,158,131,145,279,117,170,1197,144,	0,1430,14322,17530,19347,28959,32861,118518,122848,
#Partially deleted in new
chr5	143281161	143403689	chr5:143281161-143403689	1	-	143281888	143400839	0	9	880,158,131,145,279,117,170,1197,479,	0,1406,14298,17506,19323,28935,32837,118494,122049,
#Partially deleted in new
chr5	143281810	143404544	chr5:143281810-143404544	1	-	143281888	143400839	0	9	231,158,131,145,279,117,167,1197,169,	0,757,13649,16857,18674,28286,32191,117845,122565,
#Partially deleted in new
chr5	143300560	143390001	chr5:143300560-143390001	0	-	143300560	143300560	8553170	4	203,117,167,124,	0,9536,13441,89317,
#Deleted in new
chr5	143332604	143333239	chr5:143332604-143333239	7	+	143332604	143332604	16724991	1	635,	0,
#Deleted in new
chr5	143375627	143375883	chr5:143375627-143375883	3	-	143375627	143375627	8553170	1	256,	0,
#Deleted in new
chr5	143400403	143404667	chr5:143400403-143404667	0	-	143400403	143400839	789624	2	449,49,	0,4215,
#Deleted in new
chr5	143400403	143403882	chr5:143400403-143403882	0	-	143400403	143400839	789624	2	449,98,	0,3381,
#Deleted in new
chr5	143400403	143402737	chr5:143400403-143402737	0	-	143400403	143400839	789624	2	449,136,	0,2198,
#Deleted in new
chr5	143400403	143405323	chr5:143400403-143405323	0	-	143400403	143400839	789624	2	449,174,	0,4746,
#Deleted in new
chr5	143400407	143401397	chr5:143400407-143401397	0	-	143400407	143400839	789624	2	445,140,	0,850,
#Deleted in new
chr5	143406958	143407420	chr5:143406958-143407420	3	+	143406958	143406958	8553170	1	462,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	143408989	143434774	chr5:143408989-143434774	0	-	143408989	143408989	8553170	3	250,109,243,	0,24729,25542,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	143408989	143434772	chr5:143408989-143434772	0	-	143408989	143408989	8553170	2	250,241,	0,25542,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	143489854	143531350	chr5:143489854-143531350	3	-	143489854	143489854	8553170	2	123,437,	0,41059,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	143542513	143542587	chr5:143542513-143542587	3	-	143542513	143542513	8553170	1	74,	0,
#Deleted in new
chr5	143559218	143562548	chr5:143559218-143562548	3	+	143559218	143559218	8553170	4	218,95,154,58,	0,2087,2297,3272,
#Partially deleted in new
chr5	143605627	143828772	chr5:143605627-143828772	3	+	143605627	143605627	8553170	5	104,63,93,119,446,	0,57267,63766,66951,222699,
#Deleted in new
chr5	143679859	143679971	chr5:143679859-143679971	3	+	143679859	143679859	5263520	1	112,	0,
#Deleted in new
chr5	143752089	143752704	chr5:143752089-143752704	7	-	143752089	143752089	16724991	1	615,	0,
#Partially deleted in new
chr5	143812160	143820719	chr5:143812160-143820719	1	+	143812267	143820568	789624	2	144,240,	0,8319,
#Partially deleted in new
chr5	143812267	143820568	chr5:143812267-143820568	3	+	143812267	143820568	789624	2	37,89,	0,8212,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	144140878	144141166	chr5:144140878-144141166	3	+	144140878	144140878	8553170	1	288,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	144158158	144170659	chr5:144158158-144170659	3	-	144160396	144169955	789624	6	2401,182,146,173,120,125,	0,4059,5952,7273,11687,12376,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	144159272	144170630	chr5:144159272-144170630	1	-	144160396	144169955	789624	6	1287,182,146,173,120,347,	0,2945,4838,6159,10573,11011,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	144159272	144170630	chr5:144159272-144170630	1	-	144160396	144165552	789624	5	1287,182,146,173,347,	0,2945,4838,6159,11011,
#Partially deleted in new
chr5	144160477	144170635	chr5:144160477-144170635	0	-	144160477	144165552	789624	5	82,182,146,173,101,	0,1740,3633,4954,10057,
#Partially deleted in new
chr5	144162361	144170714	chr5:144162361-144170714	0	-	144162361	144165552	789624	5	38,146,169,120,180,	0,1749,3070,7484,8173,
#Partially deleted in new
chr5	144163862	144170640	chr5:144163862-144170640	0	-	144163862	144163862	8553170	4	394,173,120,106,	0,1569,5983,6672,
#Partially deleted in new
chr5	144170831	144474470	chr5:144170831-144474470	3	+	144206714	144474114	0	4	178,166,1158,811,	0,3475,35557,302828,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	144205276	144485686	chr5:144205276-144485686	1	+	144206714	144474114	0	3	765,1158,12027,	0,1112,268383,
#Partially deleted in new
chr5	144369333	144385310	chr5:144369333-144385310	3	+	144369333	144369333	8553170	5	88,127,71,130,53,	0,8409,13734,14841,15924,
#Deleted in new
chr5	144439205	144439478	chr5:144439205-144439478	7	+	144439205	144439205	16724991	1	273,	0,
#Partially deleted in new
chr5	144522139	144522988	chr5:144522139-144522988	7	+	144522139	144522139	16724991	2	338,175,	0,674,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	144535353	144535670	chr5:144535353-144535670	3	-	144535353	144535353	8553170	1	317,	0,
#Partially deleted in new
chr5	145001852	145005789	chr5:145001852-145005789	7	-	145001852	145001852	16724991	2	779,336,	0,3601,
#Partially deleted in new
chr5	145222609	145228982	chr5:145222609-145228982	3	-	145222609	145222609	8553170	2	222,271,	0,6102,
#Deleted in new
chr5	145228810	145230054	chr5:145228810-145230054	7	+	145228810	145228810	16724991	1	1244,	0,
#Partially deleted in new
chr5	145337931	145381670	chr5:145337931-145381670	3	-	145337931	145337931	8553170	2	446,84,	0,43655,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	145429867	145441175	chr5:145429867-145441175	1	+	145429867	145429867	8553170	3	58,234,362,	0,7130,10946,
#Partially deleted in new
chr5	145429902	145451099	chr5:145429902-145451099	3	+	145429902	145429902	8553170	2	23,445,	0,20752,
#Partially deleted in new
chr5	145471798	145765000	chr5:145471798-145765000	0	-	145471798	145471798	8553170	3	339,116,70,	0,1401,293132,
#Partially deleted in new
chr5	145703903	145796531	chr5:145703903-145796531	0	-	145703903	145703903	8553170	3	392,70,90,	0,61027,92538,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	145704091	145754379	chr5:145704091-145754379	0	-	145704091	145704091	8553170	2	204,215,	0,50073,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	145728359	145729349	chr5:145728359-145729349	7	-	145728359	145728359	16724991	2	675,201,	0,789,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	145759018	145835304	chr5:145759018-145835304	1	-	145764940	145835251	789624	8	1507,70,106,161,36,74,58,128,	0,5912,37423,58875,60360,60926,64058,76158,
#Partially deleted in new
chr5	145760255	145835336	chr5:145760255-145835336	1	-	145764940	145823122	789624	8	270,70,106,161,74,58,203,160,	0,4675,36186,57638,59689,62821,65742,74921,
#Partially deleted in new
chr5	145760316	145835285	chr5:145760316-145835285	3	-	145764940	145835251	789624	7	160,70,106,161,74,58,109,	0,4614,36125,57577,59628,62760,74860,
#Partially deleted in new
chr5	145795074	145835304	chr5:145795074-145835304	1	-	145796420	145835251	789624	5	1473,161,74,58,128,	0,22819,24870,28002,40102,
#Partially deleted in new
chr5	145819687	145835369	chr5:145819687-145835369	0	-	145819687	145819687	8553170	3	331,58,193,	0,3389,15489,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	145834651	145835233	chr5:145834651-145835233	0	-	145834651	145834651	8553170	2	281,57,	0,525,
#Partially deleted in new
chr5	145858520	145873011	chr5:145858520-145873011	3	-	145859732	145872968	789624	3	1395,228,379,	0,7980,14112,
#Partially deleted in new
chr5	145859495	145937126	chr5:145859495-145937126	1	-	145859732	145866659	789624	4	420,228,63,126,	0,7005,76205,77505,
#Partially deleted in new
chr5	145936578	146063316	chr5:145936578-146063316	1	+	145937928	146062701	789624	10	116,484,270,96,315,92,171,233,359,891,	0,1244,63479,67479,77168,111193,112496,119402,123287,125847,
#Deleted in new
chr5	145936704	145937931	chr5:145936704-145937931	0	+	145936704	145936704	8553170	2	446,109,	0,1118,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	145937876	146081791	chr5:145937876-146081791	3	+	145937928	146062701	789624	10	430,270,96,315,92,171,233,359,309,3332,	0,62181,66181,75870,109895,111198,118104,121989,124549,140583,
#Partially deleted in new
chr5	145997217	145998003	chr5:145997217-145998003	7	+	145997217	145997217	16724991	1	786,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	146043029	146049233	chr5:146043029-146049233	0	+	146043029	146043029	8553170	4	97,89,92,159,	0,736,4742,6045,
#Partially deleted in new
chr5	146050063	146062781	chr5:146050063-146062781	0	+	146050063	146050063	8553170	3	64,251,356,	0,5917,12362,
#Partially deleted in new
chr5	146050085	146062781	chr5:146050085-146062781	0	+	146050085	146050085	8553170	4	42,251,359,356,	0,5895,9780,12340,
#Partially deleted in new
chr5	146055821	146060151	chr5:146055821-146060151	0	+	146055821	146055821	8553170	2	392,286,	0,4044,
#Partially deleted in new
chr5	146084385	146104369	chr5:146084385-146104369	3	-	146084431	146104311	789624	4	187,137,137,177,	0,1075,13770,19807,
#Partially deleted in new
chr5	146084385	146104369	chr5:146084385-146104369	0	-	146085557	146104311	789624	4	205,102,137,177,	0,1075,13770,19807,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr5	146113037	146182660	chr5:146113037-146182660	3	-	146114105	146182493	0	32	1274,133,96,105,111,111,141,141,91,184,64,58,213,139,83,66,86,78,141,54,77,88,226,68,64,113,162,138,81,88,119,173,	0,7333,9454,10944,13397,15634,15940,16980,17981,19860,22563,27166,29834,30374,31229,31434,31586,36584,38824,40136,40696,40855,44365,44690,46369,47336,51272,55090,58872,59649,64509,69450,
#Partially deleted in new
chr5	146113895	146182524	chr5:146113895-146182524	1	-	146114105	146142888	0	18	416,133,96,105,111,111,141,141,91,184,64,58,119,118,81,88,119,37,	0,6475,8596,10086,12539,14776,15082,16122,17123,19002,21705,26308,28976,54252,58014,58791,63651,68592,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	146113910	146132626	chr5:146113910-146132626	0	-	146113910	146113910	8553170	8	401,133,96,105,111,111,141,2609,	0,6460,8581,10071,12524,14761,15067,16107,
#Partially deleted in new
chr5	146113910	146182623	chr5:146113910-146182623	1	-	146114105	146172737	0	31	401,133,96,105,111,111,141,141,91,184,64,58,213,139,83,66,86,78,141,54,77,88,226,68,64,113,162,138,81,88,136,	0,6460,8581,10071,12524,14761,15067,16107,17108,18987,21690,26293,28961,29501,30356,30561,30713,35711,37951,39263,39823,39982,43492,43817,45496,46463,50399,54217,57999,58776,68577,
#Partially deleted in new
chr5	146123978	146130216	chr5:146123978-146130216	0	-	146123978	146123978	8553170	5	108,111,111,104,199,	0,2456,4693,4999,6039,
#Deleted in new
chr5	146129082	146130557	chr5:146129082-146130557	0	-	146129082	146129082	8553170	2	36,540,	0,935,
#Partially deleted in new
chr5	146137754	146138381	chr5:146137754-146138381	7	+	146137754	146137754	16724991	2	84,237,	0,390,
#Deleted in new
chr5	146138770	146139008	chr5:146138770-146139008	7	+	146138770	146138770	16724991	1	238,	0,
#Partially deleted in new
chr5	146142781	146144333	chr5:146142781-146144333	0	-	146142781	146142781	8553170	3	303,139,67,	0,630,1485,
#Partially deleted in new
chr5	146142958	146144731	chr5:146142958-146144731	0	-	146142958	146142958	8553170	4	126,139,83,260,	0,453,1308,1513,
#Partially deleted in new
chr5	146143243	146151948	chr5:146143243-146151948	0	-	146143243	146143243	8553170	6	307,83,66,86,78,87,	0,1023,1228,1380,6378,8618,
#Partially deleted in new
chr5	146143486	146151907	chr5:146143486-146151907	0	-	146143486	146143486	8553170	6	64,83,66,47,78,46,	0,780,985,1176,6135,8375,
#Partially deleted in new
chr5	146157396	146182649	chr5:146157396-146182649	0	-	146157396	146157396	8553170	9	232,68,64,113,162,81,88,119,162,	0,331,2010,2977,6913,14513,15290,20150,25091,
#Partially deleted in new
chr5	146164314	146182625	chr5:146164314-146182625	1	-	146164419	146182493	789624	7	144,12,138,81,88,119,138,	0,145,3813,7595,8372,13232,18173,
#Partially deleted in new
chr5	146164397	146182650	chr5:146164397-146182650	0	-	146164397	146164397	8553170	5	74,138,88,119,163,	0,3730,8289,13149,18090,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	146168228	146182520	chr5:146168228-146182520	0	-	146168228	146168228	8553170	6	37,81,88,119,176,33,	0,3681,4458,9318,12783,14259,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	146172690	146182475	chr5:146172690-146182475	0	-	146172690	146172690	8553170	3	84,119,336,	0,4856,9449,
#Partially deleted in new
chr5	146203599	146289132	chr5:146203599-146289132	3	+	146203765	146286030	789624	21	225,119,125,92,194,261,294,135,165,150,145,154,297,141,120,75,165,105,192,111,3186,	0,15385,19803,25346,26117,27057,29850,33698,48111,51343,54849,57145,57910,59891,64049,65607,65820,67354,67883,81022,82347,
#Deleted in new
chr5	146245190	146245253	chr5:146245190-146245253	3	-	146245190	146245190	8553170	1	63,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	146261382	146263519	chr5:146261382-146263519	0	+	146261382	146261382	8553170	2	424,29,	0,2108,
#Partially deleted in new
chr5	146307097	146376963	chr5:146307097-146376963	3	-	146307097	146307097	8553170	3	179,154,249,	0,68245,69617,
#Deleted in new
chr5	146338838	146341722	chr5:146338838-146341722	3	+	146339112	146340444	789624	2	394,2175,	0,709,
#Deleted in new
chr5	146339023	146341722	chr5:146339023-146341722	1	+	146339112	146340444	789624	2	209,2175,	0,524,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	146375590	146376219	chr5:146375590-146376219	3	-	146375590	146375590	8553170	2	397,115,	0,514,
#Partially deleted in new
chr5	146400980	146407359	chr5:146400980-146407359	3	+	146400980	146400980	8553170	2	147,165,	0,6214,
#Partially deleted in new
chr5	146447310	146480216	chr5:146447310-146480216	0	+	146447310	146447310	8553170	11	98,226,153,454,243,201,113,89,161,57,189,	0,7745,9872,11573,16240,22233,23325,24177,31182,32544,32717,
#Partially deleted in new
chr5	146447311	146511961	chr5:146447311-146511961	3	+	146447349	146510642	0	22	97,226,153,454,243,63,201,113,89,161,57,67,136,90,119,151,165,183,180,84,101,1521,	0,7744,9871,11572,16239,21029,22232,23324,24176,31181,32543,32716,35280,36228,45608,51224,56063,56512,59716,60561,61833,63129,
#Partially deleted in new
chr5	146447331	146511023	chr5:146447331-146511023	1	+	146447349	146510642	0	21	77,226,153,454,243,201,113,89,161,57,67,136,90,119,151,165,183,180,84,101,583,	0,7724,9851,11552,16219,22212,23304,24156,31161,32523,32696,35260,36208,45588,51204,56043,56492,59696,60541,61813,63109,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr5	146447345	146510765	chr5:146447345-146510765	0	+	146447349	146510070	789624	23	63,226,153,454,243,63,201,113,89,161,57,67,136,90,119,151,165,183,180,84,101,94,325,	0,7710,9837,11538,16205,20995,22198,23290,24142,31147,32509,32682,35246,36194,45574,51190,56029,56478,59682,60527,61799,62721,63095,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	146459214	146469809	chr5:146459214-146469809	0	+	146459214	146459214	8553170	4	123,79,243,266,	0,2803,4336,10329,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	146462056	146470739	chr5:146462056-146470739	0	+	146462056	146462056	8553170	4	40,243,201,99,	0,1494,7487,8584,
#Deleted in new
chr5	146478417	146480518	chr5:146478417-146480518	0	+	146478417	146478417	8553170	3	236,57,491,	0,1437,1610,
#Partially deleted in new
chr5	146478524	146492965	chr5:146478524-146492965	0	+	146478524	146478524	8553170	7	129,57,67,51,136,90,46,	0,1330,1503,2625,4067,5015,14395,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	146481175	146511508	chr5:146481175-146511508	0	+	146481175	146481175	8553170	11	1552,90,119,151,165,183,180,84,101,94,1068,	0,2364,11744,17360,22199,22648,25852,26697,27969,28891,29265,
#Partially deleted in new
chr5	146492868	146503539	chr5:146492868-146503539	0	+	146492868	146492868	8553170	3	170,151,165,	0,5667,10506,
#Partially deleted in new
chr5	146499572	146503539	chr5:146499572-146503539	0	+	146499572	146499572	8553170	2	399,165,	0,3802,
#Partially deleted in new
chr5	146503031	146504202	chr5:146503031-146504202	0	+	146503031	146503031	8553170	2	508,379,	0,792,
#Partially deleted in new
chr5	146503418	146507177	chr5:146503418-146507177	0	+	146503418	146503418	8553170	5	121,183,131,117,150,	0,405,945,2086,3609,
#Partially deleted in new
chr5	146503470	146507348	chr5:146503470-146507348	0	+	146503470	146503470	8553170	3	69,183,321,	0,353,3557,
#Partially deleted in new
chr5	146503827	146509245	chr5:146503827-146509245	0	+	146503827	146503827	8553170	5	179,180,34,84,101,	0,3200,3917,4045,5317,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	146507370	146511505	chr5:146507370-146511505	0	+	146507370	146507370	8553170	4	586,101,94,1065,	0,1774,2696,3070,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	146510115	146510271	chr5:146510115-146510271	3	+	146510115	146510115	8553170	1	156,	0,
#Deleted in new
chr5	146513102	146516190	chr5:146513102-146516190	3	-	146514853	146516113	789624	1	3088,	0,
#Partially deleted in new
chr5	146563225	146617004	chr5:146563225-146617004	3	+	146563225	146563225	8553170	4	246,252,124,69,	0,43743,44468,53710,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	146581145	146878642	chr5:146581145-146878642	1	-	146589946	146878071	789624	9	9081,92,170,165,178,113,166,98,641,	0,11825,19145,57105,69401,109982,116833,119899,296856,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	146586098	146586200	chr5:146586098-146586200	7	-	146586098	146586098	16724991	1	102,	0,
#Partially deleted in new
chr5	146589503	147056027	chr5:146589503-147056027	1	-	146589946	147055738	789624	10	723,92,170,165,178,113,166,98,194,363,	0,3467,10787,48747,61043,101624,108475,111541,288498,466161,
#Partially deleted in new
chr5	146589503	146922576	chr5:146589503-146922576	1	-	146589946	146856535	789624	10	723,92,170,165,178,113,166,98,85,252,	0,3467,10787,48747,61043,101624,108475,111541,266995,332821,
#Partially deleted in new
chr5	146589503	146878894	chr5:146589503-146878894	0	-	146589503	146589503	789624	10	723,92,170,165,178,113,166,98,194,194,	0,3467,10787,48747,61043,101624,108475,111541,288498,289197,
#Partially deleted in new
chr5	146589506	146878765	chr5:146589506-146878765	1	-	146589946	146878071	789624	10	720,92,170,165,178,113,166,98,194,175,	0,3464,10784,48744,61040,101621,108472,111538,288495,289084,
#Partially deleted in new
chr5	146589508	146878785	chr5:146589508-146878785	1	-	146589946	146856535	789624	10	718,92,170,165,178,113,166,98,85,784,	0,3462,10782,48742,61038,101619,108470,111536,266990,288493,
#Partially deleted in new
chr5	146589510	147055974	chr5:146589510-147055974	3	-	146589946	147055743	789624	9	716,92,170,165,178,113,166,98,310,	0,3460,10780,48740,61036,101617,108468,111534,466154,
#Partially deleted in new
chr5	146589510	147081491	chr5:146589510-147081491	1	-	146589946	147081266	789624	10	716,92,170,165,178,113,166,98,78,235,	0,3460,10780,48740,61036,101617,108468,111534,491548,491746,
#Partially deleted in new
chr5	146589671	147081429	chr5:146589671-147081429	1	-	146589946	147081108	789624	11	555,92,170,165,178,113,166,98,194,78,173,	0,3299,10619,48579,60875,101456,108307,111373,288330,491387,491585,
#Partially deleted in new
chr5	146589946	146878581	chr5:146589946-146878581	0	-	146856518	146878071	789624	10	280,92,170,165,178,113,166,98,85,580,	0,3024,10344,48304,60600,101181,108032,111098,266552,288055,
#Partially deleted in new
chr5	146590037	146600376	chr5:146590037-146600376	0	-	146592135	146600376	789624	4	189,145,92,86,	0,2011,2933,10253,
#Partially deleted in new
chr5	146650546	147055931	chr5:146650546-147055931	0	-	146650546	146650546	8553170	3	178,85,267,	0,205952,405118,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	146656400	146656695	chr5:146656400-146656695	3	-	146656400	146656400	8553170	1	295,	0,
#Partially deleted in new
chr5	146691213	146879170	chr5:146691213-146879170	0	-	146856518	146878071	789624	6	27,166,98,85,194,39,	0,6765,9831,165285,186788,187918,
#Partially deleted in new
chr5	146698016	147055959	chr5:146698016-147055959	0	-	147054624	147055743	789624	4	128,98,62,295,	0,3028,356581,357648,
#Partially deleted in new
chr5	146698028	147055931	chr5:146698028-147055931	0	-	147040734	147055743	789624	4	116,98,89,267,	0,3016,342688,357636,
#Partially deleted in new
chr5	146698039	146878785	chr5:146698039-146878785	0	-	146856518	146878071	789624	5	105,98,85,194,85,	0,3005,158459,179962,180661,
#Partially deleted in new
chr5	146698060	146922527	chr5:146698060-146922527	0	-	146698060	146698060	8553170	4	84,98,159,203,	0,2984,221623,224264,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	146698077	147081470	chr5:146698077-147081470	0	-	146698077	147035178	789624	6	67,98,72,89,78,149,	0,2967,337091,342639,382981,383244,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	146701071	147081293	chr5:146701071-147081293	0	-	146878082	147035178	789624	4	71,194,72,235,	0,176930,334097,379987,
#Partially deleted in new
chr5	146701085	147084784	chr5:146701085-147084784	0	-	146701085	146701085	8553170	4	57,194,78,202,	0,176916,379973,383497,
#Deleted in new
chr5	146706380	146707600	chr5:146706380-146707600	7	-	146706380	146706380	16724991	1	1220,	0,
#Partially deleted in new
chr5	146751221	146922522	chr5:146751221-146922522	0	-	146751221	146751221	8553170	2	349,198,	0,171103,
#Deleted in new
chr5	146914206	146919506	chr5:146914206-146919506	3	-	146914206	146914206	789624	4	228,89,15,115,	0,3616,4167,5185,
#Partially deleted in new
chr5	147180203	147234859	chr5:147180203-147234859	3	-	147180203	147180203	8553170	3	541,175,147,	0,21773,54509,
#Partially deleted in new
chr5	147234962	147375916	chr5:147234962-147375916	0	+	147234962	147234962	8553170	11	237,148,56,152,174,38,90,98,117,126,827,	0,4576,43161,44284,88935,108043,116102,126554,135691,138206,140127,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	147234962	147387852	chr5:147234962-147387852	3	+	147239634	147383983	0	13	237,148,56,152,174,38,90,98,117,126,129,65,3963,	0,4576,43161,44284,88935,108043,116102,126554,135691,138206,140127,148478,148927,
#Partially deleted in new
chr5	147235054	147240159	chr5:147235054-147240159	0	+	147235054	147235054	8553170	2	145,621,	0,4484,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr5	147235071	147387840	chr5:147235071-147387840	0	+	147275985	147375062	8553170	15	128,148,74,56,152,174,38,90,98,117,126,192,65,65,3466,	0,4467,40886,43052,44175,88826,107934,115993,126445,135582,138097,139955,148369,148818,149303,
#Partially deleted in new
chr5	147235105	147348830	chr5:147235105-147348830	1	+	147239634	147348723	0	7	94,148,56,152,174,38,136,	0,4433,43018,44141,88792,107900,113589,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr5	147235124	147384678	chr5:147235124-147384678	1	+	147239634	147384436	789624	14	75,148,56,152,174,38,90,98,117,126,129,65,65,304,	0,4414,42999,44122,88773,107881,115940,126392,135529,138044,139965,148316,148765,149250,
#Partially deleted in new
chr5	147342472	147351152	chr5:147342472-147351152	0	+	147342472	147342472	8553170	2	571,88,	0,8592,
#Partially deleted in new
chr5	147382897	147383949	chr5:147382897-147383949	0	+	147382897	147382897	8553170	2	608,60,	0,992,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	147383329	147384743	chr5:147383329-147384743	0	+	147383329	147383329	8553170	2	176,369,	0,1045,
#Partially deleted in new
chr5	147383348	147384446	chr5:147383348-147384446	0	+	147383348	147383348	8553170	3	157,65,72,	0,541,1026,
#Partially deleted in new
chr5	147390810	147453959	chr5:147390810-147453959	3	-	147394034	147453587	0	14	3313,163,180,171,142,157,121,69,81,62,165,185,89,411,	0,4748,6855,8271,9881,10729,14799,17917,21797,22785,24898,27636,34064,62738,
#Partially deleted in new
chr5	147390811	147510056	chr5:147390811-147510056	1	-	147394034	147509858	0	14	3312,163,180,171,142,157,121,69,81,62,165,185,89,579,	0,4747,6854,8270,9880,10728,14798,17916,21796,22784,24897,27635,34063,118666,
#Partially deleted in new
chr5	147393824	147401602	chr5:147393824-147401602	0	-	147394034	147401602	789624	5	299,163,171,142,63,	0,1734,5257,6867,7715,
#Partially deleted in new
chr5	147395653	147453688	chr5:147395653-147453688	0	-	147395653	147395653	8553170	4	68,180,171,95,	0,2012,3428,57940,
#Partially deleted in new
chr5	147395676	147405640	chr5:147395676-147405640	0	-	147399212	147405640	789624	5	45,180,171,157,31,	0,1989,3405,5863,9933,
#Partially deleted in new
chr5	147401539	147406198	chr5:147401539-147406198	0	-	147401539	147401539	8553170	2	157,589,	0,4070,
#Partially deleted in new
chr5	147401759	147401996	chr5:147401759-147401996	3	+	147401759	147401759	8553170	1	237,	0,
#Partially deleted in new
chr5	147408727	147453665	chr5:147408727-147453665	0	-	147408727	147408727	8553170	6	69,81,62,154,89,117,	0,3880,4868,9750,16147,44821,
#Partially deleted in new
chr5	147418482	147454266	chr5:147418482-147454266	0	-	147418482	147453587	789624	4	149,89,206,95,	0,6392,35066,35689,
#Partially deleted in new
chr5	147472631	147509535	chr5:147472631-147509535	0	-	147472631	147472631	8553170	2	713,58,	0,36846,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr5	147585438	147782848	chr5:147585438-147782848	1	-	147601760	147671806	789624	22	6248,71,66,204,78,69,66,54,99,99,63,84,129,120,57,141,147,99,210,498,277,393,	0,16302,26867,32472,35227,38182,43312,44254,45974,47241,50783,51526,54193,55265,56269,58619,59411,62937,64899,75509,86239,197017,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr5	147588426	147782542	chr5:147588426-147782542	1	-	147601760	147671806	789624	21	3260,71,66,204,78,69,66,54,99,99,84,129,120,57,141,147,99,210,498,277,87,	0,13314,23879,29484,32239,35194,40324,41266,42986,44253,48538,51205,52277,53281,55631,56423,59949,61911,72521,83251,194029,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr5	147588565	147782775	chr5:147588565-147782775	3	-	147591665	147671806	789624	21	3121,66,204,78,69,66,54,99,99,63,84,129,120,57,141,147,99,210,498,277,320,	0,23740,29345,32100,35055,40185,41127,42847,44114,47656,48399,51066,52138,53142,55492,56284,59810,61772,72382,83112,193890,
#Partially deleted in new
chr5	147591361	147782768	chr5:147591361-147782768	1	-	147601760	147782458	789624	21	325,71,66,204,78,69,66,54,99,99,63,84,129,120,57,141,147,99,210,498,313,	0,10379,20944,26549,29304,32259,37389,38331,40051,41318,44860,45603,48270,49342,50346,52696,53488,57014,58976,69586,191094,
#Partially deleted in new
chr5	147632678	147644199	chr5:147632678-147644199	0	-	147632678	147632678	8553170	6	100,63,84,129,57,142,	0,3543,4286,6953,9029,11379,
#Partially deleted in new
chr5	147632761	147660937	chr5:147632761-147660937	0	+	147632761	147632761	8553170	3	42,129,485,	0,3515,27691,
#Partially deleted in new
chr5	147648375	147661446	chr5:147648375-147661446	0	-	147648375	147648375	8553170	2	99,499,	0,12572,
#Partially deleted in new
chr5	147824567	147831786	chr5:147824567-147831786	3	-	147824660	147831577	0	4	139,107,32,264,	0,3454,5031,6955,
#Partially deleted in new
chr5	147824571	147828130	chr5:147824571-147828130	0	-	147824571	147824571	8553170	2	135,109,	0,3450,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	147827085	147831635	chr5:147827085-147831635	1	-	147828017	147831577	789624	3	1043,32,113,	0,2513,4437,
#Deleted in new
chr5	147851643	147852659	chr5:147851643-147852659	7	-	147851643	147851643	16724991	1	1016,	0,
#Duplicated in new
chr5	147870681	147882190	chr5:147870681-147882190	1	+	147881525	147882050	789624	3	73,203,164,	0,10764,11345,
#Deleted in new
chr5	147878710	147882190	chr5:147878710-147882190	3	+	147878803	147882050	789624	3	148,203,164,	0,2735,3316,
#Partially deleted in new
chr5	147880725	147906490	chr5:147880725-147906490	0	-	147880725	147880725	8553170	3	369,145,59,	0,20903,25706,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	147886085	147886878	chr5:147886085-147886878	3	-	147886085	147886085	8553170	1	793,	0,
#Deleted in new
chr5	147887111	147887704	chr5:147887111-147887704	3	+	147887111	147887111	8553170	1	593,	0,
#Partially deleted in new
chr5	147892707	147906502	chr5:147892707-147906502	3	-	147896992	147906501	789624	4	232,58,145,71,	0,4276,8921,13724,
#Partially deleted in new
chr5	147901307	147906538	chr5:147901307-147906538	1	-	147901624	147906501	789624	2	466,107,	0,5124,
#Deleted in new
chr5	147922178	147923421	chr5:147922178-147923421	7	+	147922178	147922178	16724991	1	1243,	0,
#Partially deleted in new
chr5	148025682	148072201	chr5:148025682-148072201	0	+	148064044	148072201	789624	5	104,237,26,71,54,	0,38180,39664,44697,46465,
#Partially deleted in new
chr5	148063971	148137289	chr5:148063971-148137289	1	+	148064044	148136991	0	34	128,26,128,73,128,64,128,64,128,88,128,82,128,82,128,49,128,85,128,67,128,97,128,73,128,97,128,73,90,128,97,131,91,307,	0,1375,6351,8176,22433,24570,25522,27193,30382,31846,33895,35262,36482,37383,37809,40980,43065,44781,47796,48896,50390,52398,54465,55014,56037,56323,59861,60793,61552,61751,63011,67287,69825,73011,
#Partially deleted in new
chr5	148063971	148124940	chr5:148063971-148124940	1	+	148064044	148124849	0	28	128,26,128,73,128,64,128,64,128,88,128,82,128,82,128,49,128,85,128,67,128,97,128,73,128,97,128,176,	0,1375,6351,8176,22433,24570,25522,27193,30382,31846,33895,35262,36482,37383,37809,40980,43065,44781,47796,48896,50390,52398,54465,55014,56037,56323,59861,60793,
#Partially deleted in new
chr5	148063979	148095900	chr5:148063979-148095900	0	+	148064044	148089494	789624	12	120,26,128,73,128,64,75,56,128,64,128,83,	0,1367,6343,8168,22425,24562,25039,25237,25514,27185,30374,31838,
#Partially deleted in new
chr5	148063979	148123960	chr5:148063979-148123960	0	+	148064044	148123960	789624	27	120,26,71,73,128,64,128,64,128,88,128,82,128,82,128,49,128,85,128,67,128,97,128,73,128,97,128,	0,1367,6400,8168,22425,24562,25514,27185,30374,31838,33887,35254,36474,37375,37801,40972,43057,44773,47788,48888,50382,52390,54457,55006,56029,56315,59853,
#Partially deleted in new
chr5	148063983	148118989	chr5:148063983-148118989	0	+	148063983	148063983	8553170	24	116,129,128,73,128,64,128,64,128,88,128,82,128,82,128,49,128,85,128,67,128,97,128,4,	0,1363,6339,8164,22421,24558,25510,27181,30370,31834,33883,35250,36470,37371,37797,40968,43053,44769,47784,48884,50378,52386,54453,55002,
#Partially deleted in new
chr5	148064002	148137289	chr5:148064002-148137289	3	+	148064044	148136991	0	33	97,26,128,73,128,64,128,64,128,88,128,82,128,82,128,49,128,85,128,67,128,97,128,73,128,97,128,73,128,97,131,91,307,	0,1344,6320,8145,22402,24539,25491,27162,30351,31815,33864,35231,36451,37352,37778,40949,43034,44750,47765,48865,50359,52367,54434,54983,56006,56292,59830,60762,61720,62980,67256,69794,72980,
#Partially deleted in new
chr5	148090652	148098003	chr5:148090652-148098003	0	+	148090652	148090652	8553170	5	48,64,128,88,137,	0,512,3701,5165,7214,
#Partially deleted in new
chr5	148090927	148101428	chr5:148090927-148101428	0	+	148090927	148090927	8553170	8	118,64,128,88,128,82,128,74,	0,237,3426,4890,6939,8306,9526,10427,
#Partially deleted in new
chr5	148169732	148175398	chr5:148169732-148175398	3	+	148169732	148175398	789624	4	67,44,137,46,	0,1197,4501,5620,
#Partially deleted in new
chr5	148169732	148175398	chr5:148169732-148175398	1	+	148169732	148175385	789624	3	67,44,46,	0,1197,5620,
#Partially deleted in new
chr5	148202793	148213952	chr5:148202793-148213952	0	+	148203096	148213952	789624	4	100,134,23,43,	0,227,3242,11116,
#Partially deleted in new
chr5	148202793	148215136	chr5:148202793-148215136	3	+	148203096	148214950	0	5	100,134,23,116,232,	0,227,3242,11116,12111,
#Partially deleted in new
chr5	148202840	148215137	chr5:148202840-148215137	1	+	148203096	148214950	0	4	314,23,116,233,	0,3195,11069,12064,
#Deleted in new
chr5	148221359	148221642	chr5:148221359-148221642	7	-	148221359	148221359	16724991	1	283,	0,
#Partially deleted in new
chr5	148221649	148243534	chr5:148221649-148243534	1	+	148228987	148243254	789624	3	148,122,1089,	0,7220,20796,
#Partially deleted in new
chr5	148221695	148243573	chr5:148221695-148243573	0	+	148221695	148221695	8553170	2	177,1128,	0,20750,
#Partially deleted in new
chr5	148221738	148243580	chr5:148221738-148243580	0	+	148221738	148221738	8553170	3	59,244,1135,	0,15950,20707,
#Deleted in new
chr5	148238571	148243580	chr5:148238571-148243580	3	+	148238597	148243254	789624	2	75,1135,	0,3874,
#Partially deleted in new
chr5	148268179	148286254	chr5:148268179-148286254	3	+	148270072	148286048	789624	6	328,170,103,38,128,255,	0,539,1860,6167,13924,17820,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	148268306	148383783	chr5:148268306-148383783	3	-	148268306	148268306	789624	5	698,744,162,144,285,	0,21945,39697,110395,115192,
#Partially deleted in new
chr5	148268859	148286210	chr5:148268859-148286210	1	+	148270072	148286048	789624	5	29,103,38,128,211,	0,1180,5487,13244,17140,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	148268859	148286210	chr5:148268859-148286210	1	+	148282115	148286048	789624	6	29,103,149,41,128,211,	0,1180,1904,5484,13244,17140,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	148282319	148383563	chr5:148282319-148383563	1	-	148282319	148282319	8553170	6	992,176,744,162,144,65,	0,1080,7932,25684,96382,101179,
#Partially deleted in new
chr5	148307297	148308258	chr5:148307297-148308258	7	+	148307297	148307297	16724991	2	37,544,	0,417,
#Deleted in new
chr5	148312418	148314211	chr5:148312418-148314211	0	+	148312418	148312418	8553170	2	126,112,	0,1681,
#Partially deleted in new
chr5	148312422	148315922	chr5:148312422-148315922	3	+	148312483	148315684	0	4	122,26,125,284,	0,951,1677,3216,
#Deleted in new
chr5	148312425	148314508	chr5:148312425-148314508	0	+	148312425	148312425	8553170	3	119,26,409,	0,948,1674,
#Deleted in new
chr5	148312425	148314479	chr5:148312425-148314479	0	+	148312425	148312425	8553170	2	119,1106,	0,948,
#Partially deleted in new
chr5	148313942	148315922	chr5:148313942-148315922	0	+	148313942	148313942	8553170	2	282,284,	0,1696,
#Partially deleted in new
chr5	148314073	148315786	chr5:148314073-148315786	1	+	148314090	148315684	789624	2	151,148,	0,1565,
#Partially deleted in new
chr5	148335558	148339849	chr5:148335558-148339849	3	+	148335613	148339712	789624	4	110,32,128,183,	0,863,2919,4108,
#Partially deleted in new
chr5	148362776	148372152	chr5:148362776-148372152	7	+	148362776	148362776	16724991	4	55,19,123,82,	0,1236,3243,9294,
#Partially deleted in new
chr5	148383934	148442827	chr5:148383934-148442827	1	+	148394776	148442147	789624	21	105,191,134,164,166,138,138,94,131,171,143,211,120,180,101,103,167,146,104,114,859,	0,10779,15064,18047,18413,20750,22322,25189,26700,30201,31993,33059,40063,41587,49489,49700,54397,55712,56489,57189,58034,
#Partially deleted in new
chr5	148383934	148442836	chr5:148383934-148442836	1	+	148394776	148442147	789624	22	105,191,134,164,166,138,138,94,131,171,143,211,120,180,735,101,103,167,146,104,114,868,	0,10779,15064,18047,18413,20750,22322,25189,26700,30201,31993,33059,40063,41587,43278,49489,49700,54397,55712,56489,57189,58034,
#Partially deleted in new
chr5	148383951	148402137	chr5:148383951-148402137	0	+	148383951	148383951	8553170	5	88,191,58,134,156,	0,10762,13667,15047,18030,
#Partially deleted in new
chr5	148384001	148442836	chr5:148384001-148442836	3	+	148394776	148442147	789624	22	38,191,134,164,166,138,138,94,131,171,143,211,120,180,510,101,103,167,146,104,114,868,	0,10712,14997,17980,18346,20683,22255,25122,26633,30134,31926,32992,39996,41520,43211,49422,49633,54330,55645,56422,57122,57967,
#Partially deleted in new
chr5	148384001	148402565	chr5:148384001-148402565	0	+	148384001	148384001	8553170	5	38,191,134,164,218,	0,10712,14997,17980,18346,
#Partially deleted in new
chr5	148384008	148399537	chr5:148384008-148399537	0	+	148384008	148384008	8553170	3	31,191,539,	0,10705,14990,
#Partially deleted in new
chr5	148384009	148417143	chr5:148384009-148417143	0	+	148384009	148384009	8553170	4	30,191,143,150,	0,10704,31918,32984,
#Partially deleted in new
chr5	148384763	148394862	chr5:148384763-148394862	0	+	148384763	148384763	8553170	2	343,149,	0,9950,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	148389747	148390029	chr5:148389747-148390029	3	+	148389747	148389747	8553170	1	282,	0,
#Partially deleted in new
chr5	148394711	148409220	chr5:148394711-148409220	0	+	148394711	148394711	8553170	7	193,134,164,166,138,138,97,	0,4287,7270,7636,9973,11545,14412,
#Partially deleted in new
chr5	148394711	148442835	chr5:148394711-148442835	1	+	148394776	148442147	789624	20	193,134,164,166,138,138,94,131,171,143,211,120,180,101,103,167,146,104,114,867,	0,4287,7270,7636,9973,11545,14412,15923,19424,21216,22282,29286,30810,38712,38923,43620,44935,45712,46412,47257,
#Partially deleted in new
chr5	148394711	148402462	chr5:148394711-148402462	0	+	148394711	148394711	8553170	4	193,118,164,115,	0,4303,7270,7636,
#Deleted in new
chr5	148398996	148402433	chr5:148398996-148402433	0	+	148398996	148398996	8553170	3	136,164,86,	0,2985,3351,
#Partially deleted in new
chr5	148404683	148410868	chr5:148404683-148410868	0	+	148404683	148404683	8553170	4	139,138,94,234,	0,1573,4440,5951,
#Deleted in new
chr5	148413239	148416688	chr5:148413239-148416688	0	+	148413239	148413239	8553170	3	1067,143,52,	0,2688,3397,
#Deleted in new
chr5	148415359	148417215	chr5:148415359-148417215	0	+	148415359	148415359	8553170	3	28,143,222,	0,568,1634,
#Deleted in new
chr5	148423748	148427270	chr5:148423748-148427270	0	+	148423748	148423748	8553170	3	369,180,58,	0,1773,3464,
#Partially deleted in new
chr5	148427622	148441245	chr5:148427622-148441245	0	+	148427622	148427622	8553170	7	100,101,103,167,146,104,122,	0,5801,6012,10709,12024,12801,13501,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	148430158	148430807	chr5:148430158-148430807	3	-	148430158	148430158	8553170	2	282,232,	0,417,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	148433232	148435058	chr5:148433232-148435058	0	+	148433232	148433232	8553170	2	292,1424,	0,402,
#Deleted in new
chr5	148440355	148441502	chr5:148440355-148441502	0	+	148440355	148440355	8553170	2	172,379,	0,768,
#Partially deleted in new
chr5	148451031	148637020	chr5:148451031-148637020	1	-	148451184	148637014	0	6	241,569,154,201,126,32,	0,58424,72161,97636,99105,185957,
#Partially deleted in new
chr5	148451169	148637014	chr5:148451169-148637014	0	-	148465864	148637014	0	8	103,71,76,569,154,201,126,26,	0,10703,14680,58286,72023,97498,98967,185819,
#Partially deleted in new
chr5	148451184	148637016	chr5:148451184-148637016	1	-	148465864	148637014	0	7	88,76,569,154,201,126,28,	0,14665,58271,72008,97483,98952,185804,
#Partially deleted in new
chr5	148476635	148637029	chr5:148476635-148637029	1	-	148476738	148637014	0	6	110,569,154,201,126,41,	0,32820,46557,72032,73501,160353,
#Partially deleted in new
chr5	148481469	148637014	chr5:148481469-148637014	1	-	148481469	148637014	0	6	160,569,154,201,126,26,	0,27986,41723,67198,68667,155519,
#Partially deleted in new
chr5	148481546	148654153	chr5:148481546-148654153	1	-	148483202	148637014	0	8	1747,120,569,154,201,126,73,92,	0,2713,27909,41646,67121,68590,155442,172515,
#Partially deleted in new
chr5	148481546	148654153	chr5:148481546-148654153	3	-	148483202	148637014	0	7	1747,569,154,201,126,73,92,	0,27909,41646,67121,68590,155442,172515,
#Partially deleted in new
chr5	148481557	148637061	chr5:148481557-148637061	1	-	148483202	148637014	0	7	1736,120,569,154,201,126,73,	0,2702,27898,41635,67110,68579,155431,
#Partially deleted in new
chr5	148482855	148654527	chr5:148482855-148654527	0	-	148490806	148637014	789624	8	438,247,569,154,201,126,73,466,	0,7744,26600,40337,65812,67281,154133,171206,
#Partially deleted in new
chr5	148483164	148637033	chr5:148483164-148637033	1	-	148483202	148637014	0	6	129,569,154,201,126,45,	0,26291,40028,65503,66972,153824,
#Partially deleted in new
chr5	148509316	148637020	chr5:148509316-148637020	0	-	148509316	148509316	8553170	5	708,154,201,126,32,	0,13876,39351,40820,127672,
#Partially deleted in new
chr5	148550136	148677235	chr5:148550136-148677235	0	-	148550136	148550136	8553170	7	126,73,82,248,42,44,254,	0,86852,112470,115349,117222,124537,126845,
#Partially deleted in new
chr5	148628450	148665644	chr5:148628450-148665644	1	-	148637013	148665619	789624	4	1958,73,82,159,	0,8538,34156,37035,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	148644686	148646390	chr5:148644686-148646390	3	-	148644686	148644686	8553170	1	1704,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	148825244	148828687	chr5:148825244-148828687	3	+	148826831	148828073	0	1	3443,	0,
#Partially deleted in new
chr5	148954800	149007111	chr5:148954800-149007111	0	-	148954800	148954800	8553170	2	85,231,	0,52080,
#Deleted in new
chr5	148970339	148970653	chr5:148970339-148970653	3	+	148970339	148970339	8553170	1	314,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr5	149001347	149063044	chr5:149001347-149063044	0	-	149040666	149063022	789624	18	3555,197,151,123,151,181,1695,42,134,130,196,74,144,144,106,128,99,74,	0,5533,7503,8922,11236,25224,25512,27329,30206,33043,36947,39256,40126,41346,43185,46514,50794,61623,
#Partially deleted in new
chr5	149003946	149041546	chr5:149003946-149041546	0	-	149034495	149041546	789624	13	956,189,151,123,151,181,1695,42,134,130,196,74,131,	0,2934,4904,6323,8637,22625,22913,24730,27607,30444,34348,36657,37469,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	149003952	149008611	chr5:149003952-149008611	1	-	149004710	149007141	789624	2	950,1731,	0,2928,
#Partially deleted in new
chr5	149004550	149031616	chr5:149004550-149031616	0	-	149028668	149031616	789624	8	352,197,151,123,151,181,1859,63,	0,2330,4300,5719,8033,22021,22309,27003,
#Partially deleted in new
chr5	149004620	149063124	chr5:149004620-149063124	3	-	149004710	149063022	789624	17	282,197,151,123,151,181,1695,42,134,196,74,202,144,106,128,99,154,	0,2260,4230,5649,7963,21951,22239,24056,26933,33674,35983,36795,38073,39912,43241,47521,58350,
#Partially deleted in new
chr5	149004621	149063089	chr5:149004621-149063089	1	-	149004710	149063022	789624	17	281,197,151,123,151,181,1695,42,134,196,74,202,123,106,128,99,119,	0,2259,4229,5648,7962,21950,22238,24055,26932,33673,35982,36794,38072,39911,43240,47520,58349,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	149025777	149063047	chr5:149025777-149063047	0	-	149040666	149063022	789624	12	2777,42,134,130,196,74,144,144,106,128,99,77,	0,2899,5776,8613,12517,14826,15696,16916,18755,22084,26364,37193,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	149026563	149063062	chr5:149026563-149063062	0	-	149045952	149063022	789624	12	1991,42,134,196,74,202,144,106,68,128,99,92,	0,2113,4990,11731,14040,14852,16130,17969,19330,21298,25578,36407,
#Partially deleted in new
chr5	149028384	149036021	chr5:149028384-149036021	0	-	149028384	149028384	8553170	5	170,42,134,210,165,	0,292,3169,7008,7472,
#Partially deleted in new
chr5	149031585	149042747	chr5:149031585-149042747	0	-	149031585	149031585	8553170	5	102,196,74,144,54,	0,6709,9018,9888,11108,
#Partially deleted in new
chr5	149042719	149063062	chr5:149042719-149063062	0	-	149042719	149042719	8553170	5	118,106,158,99,92,	0,1813,5142,9422,20251,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	149043654	149063058	chr5:149043654-149063058	0	-	149043654	149043654	8553170	3	4335,99,88,	0,8487,19316,
#Deleted in new
chr5	149062312	149062409	chr5:149062312-149062409	3	-	149062312	149062312	5263520	1	97,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	149063316	149071527	chr5:149063316-149071527	3	+	149063316	149063316	8553170	4	358,108,109,181,	0,750,933,8030,
#Partially deleted in new
chr5	149063454	149109787	chr5:149063454-149109787	0	+	149063454	149063454	789624	3	220,109,325,	0,795,46008,
#Deleted in new
chr5	149063485	149064174	chr5:149063485-149064174	0	+	149063485	149063485	8553170	2	189,104,	0,585,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	149063502	149066985	chr5:149063502-149066985	1	+	149063502	149063502	8553170	2	172,2919,	0,564,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	149063608	149107138	chr5:149063608-149107138	0	+	149063608	149063608	8553170	2	66,371,	0,43159,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	149064272	149089452	chr5:149064272-149089452	0	+	149064272	149064272	8553170	2	86,159,	0,25021,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	149116177	149116480	chr5:149116177-149116480	3	-	149116177	149116177	8553170	1	303,	0,
#Partially deleted in new
chr5	149141482	149260542	chr5:149141482-149260542	1	+	149142095	149258404	0	21	172,100,138,184,113,127,94,88,59,72,130,48,135,65,148,30,59,61,8,81,2252,	0,526,41969,56736,58833,65525,69243,75476,89166,91746,98276,101008,103398,104999,106299,108332,108964,109876,110718,111274,116808,
#Partially deleted in new
chr5	149141502	149260439	chr5:149141502-149260439	3	+	149142095	149258404	0	24	152,100,138,184,113,127,94,88,59,72,156,30,130,99,48,135,65,148,30,59,61,8,81,2149,	0,506,41949,56716,58813,65505,69223,75456,89146,91726,95945,97745,98256,99173,100988,103378,104979,106279,108312,108944,109856,110698,111254,116788,
#Partially deleted in new
chr5	149141613	149260439	chr5:149141613-149260439	1	+	149142095	149258404	0	23	495,138,184,113,127,94,88,59,72,156,30,130,99,48,135,65,148,30,59,61,8,81,2149,	0,41838,56605,58702,65394,69112,75345,89035,91615,95834,97634,98145,99062,100877,103267,104868,106168,108201,108833,109745,110587,111143,116677,
#Partially deleted in new
chr5	149141750	149260439	chr5:149141750-149260439	0	+	149142095	149200357	789624	20	358,138,184,79,113,127,94,88,59,72,130,135,65,148,30,59,61,8,81,2149,	0,41701,56468,57293,58565,65257,68975,75208,88898,91478,98008,103130,104731,106031,108064,108696,109608,110450,111006,116540,
#Partially deleted in new
chr5	149141820	149260439	chr5:149141820-149260439	1	+	149142095	149259575	0	19	288,138,184,113,127,94,88,59,72,130,135,65,148,30,59,61,8,81,894,	0,41631,56398,58495,65187,68905,75138,88828,91408,97938,103060,104661,105961,107994,108626,109538,110380,110936,117725,
#Partially deleted in new
chr5	149142046	149258413	chr5:149142046-149258413	1	+	149142095	149258404	789624	22	62,138,184,113,127,94,88,59,72,156,30,130,48,135,65,148,30,59,61,8,81,123,	0,41405,56172,58269,64961,68679,74912,88602,91182,95401,97201,97712,100444,102834,104435,105735,107768,108400,109312,110154,110710,116244,
#Partially deleted in new
chr5	149163954	149276776	chr5:149163954-149276776	3	-	149163954	149163954	8553170	2	300,87,	0,112735,
#Partially deleted in new
chr5	149174507	149276762	chr5:149174507-149276762	1	-	149174507	149174507	8553170	3	215,136,73,	0,2436,102182,
#Partially deleted in new
chr5	149183548	149200620	chr5:149183548-149200620	0	+	149183548	149183548	8553170	3	41,184,305,	0,14670,16767,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	149216522	149276805	chr5:149216522-149276805	3	-	149216522	149216522	8553170	2	4417,116,	0,60167,
#Partially deleted in new
chr5	149233252	149242584	chr5:149233252-149242584	0	+	149233252	149233252	8553170	6	48,156,30,130,99,94,	0,4195,5995,6506,7423,9238,
#Deleted in new
chr5	149237447	149240617	chr5:149237447-149240617	0	+	149237447	149237447	8553170	4	156,30,130,150,	0,1800,2311,3020,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	149243347	149258457	chr5:149243347-149258457	1	+	149246537	149258404	789624	8	1668,65,148,30,59,70,83,167,	0,3134,4434,6467,7099,8011,9407,14943,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	149243347	149258457	chr5:149243347-149258457	1	+	149246537	149258404	0	9	1668,65,148,30,59,61,8,81,167,	0,3134,4434,6467,7099,8011,8853,9409,14943,
#Partially deleted in new
chr5	149252343	149258574	chr5:149252343-149258574	0	+	149252343	149252343	8553170	2	494,284,	0,5947,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr5	149271870	149341802	chr5:149271870-149341802	3	+	149271968	149340030	789624	19	114,129,84,98,109,99,212,180,93,94,153,212,146,73,112,165,179,129,1796,	0,27638,28400,29262,30547,34435,35531,38085,40241,43950,44280,45858,47711,48520,50735,57795,60824,63723,68136,
#Partially deleted in new
chr5	149271870	149312375	chr5:149271870-149312375	0	+	149271870	149271870	8553170	9	114,129,84,98,109,99,212,180,264,	0,27638,28400,29262,30547,34435,35531,38085,40241,
#Partially deleted in new
chr5	149271894	149307613	chr5:149271894-149307613	0	+	149271894	149271894	8553170	8	90,129,84,98,109,50,99,212,	0,27614,28376,29238,30523,32376,34411,35507,
#Partially deleted in new
chr5	149271918	149340121	chr5:149271918-149340121	1	+	149271968	149340030	789624	18	66,129,84,98,109,99,212,180,93,94,153,212,146,73,112,165,179,115,	0,27590,28352,29214,30499,34387,35483,38037,40193,43902,44232,45810,47663,48472,50687,57747,60776,68088,
#Partially deleted in new
chr5	149301190	149302668	chr5:149301190-149302668	0	+	149301190	149301190	8553170	2	40,251,	0,1227,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	149315639	149341802	chr5:149315639-149341802	0	+	149315639	149315639	8553170	10	275,153,212,146,73,112,165,179,129,1796,	0,511,2089,3942,4751,6966,14026,17055,19954,24367,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	149324219	149345333	chr5:149324219-149345333	3	-	149324219	149324219	8553170	2	695,162,	0,20952,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	149345429	149354583	chr5:149345429-149354583	3	+	149345539	149351282	789624	4	187,154,82,3666,	0,2842,4224,5488,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	149345429	149349858	chr5:149345429-149349858	1	+	149345539	149349809	789624	3	187,154,205,	0,2842,4224,
#Partially deleted in new
chr5	149345501	149351654	chr5:149345501-149351654	1	+	149345539	149351055	789624	3	115,154,737,	0,2770,5416,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	149345618	149354583	chr5:149345618-149354583	0	+	149345618	149345618	8553170	4	207,154,82,3666,	0,2653,4035,5299,
#Partially deleted in new
chr5	149348115	149357642	chr5:149348115-149357642	3	-	149348115	149348115	789624	2	283,118,	0,9409,
#Partially deleted in new
chr5	149358006	149369653	chr5:149358006-149369653	3	+	149358068	149368654	789624	6	150,207,175,212,141,1661,	0,4630,6029,7935,9353,9986,
#Partially deleted in new
chr5	149358036	149365971	chr5:149358036-149365971	0	+	149358068	149363007	789624	5	120,207,50,175,30,	0,4600,4930,5999,7905,
#Partially deleted in new
chr5	149358068	149369653	chr5:149358068-149369653	0	+	149358068	149362781	789624	6	104,207,175,35,141,1661,	0,4568,5967,8050,9291,9924,
#Partially deleted in new
chr5	149358068	149369653	chr5:149358068-149369653	0	+	149358068	149362781	789624	6	104,207,175,212,141,1661,	0,4568,5967,7873,9291,9924,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	149362052	149369653	chr5:149362052-149369653	0	+	149362052	149362052	8553170	4	2158,212,141,1661,	0,3889,5307,5940,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	149362239	149369653	chr5:149362239-149369653	1	+	149362818	149368654	789624	5	604,175,212,141,1661,	0,1796,3702,5120,5753,
#Partially deleted in new
chr5	149363068	149369653	chr5:149363068-149369653	0	+	149363068	149363068	8553170	3	3085,141,1661,	0,4291,4924,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	149371323	149374342	chr5:149371323-149374342	0	-	149371323	149371323	8553170	3	290,130,52,	0,880,2967,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	149372173	149375116	chr5:149372173-149375116	3	+	149372173	149372173	8553170	2	180,408,	0,2535,
#Partially deleted in new
chr5	149374266	149379276	chr5:149374266-149379276	3	-	149374368	149379225	789624	3	334,290,72,	0,2469,4938,
#Partially deleted in new
chr5	149374356	149404202	chr5:149374356-149404202	0	-	149374356	149374356	8553170	3	244,290,95,	0,2379,29751,
#Partially deleted in new
chr5	149406688	149424397	chr5:149406688-149424397	0	+	149406688	149406688	8553170	4	70,56,121,308,	0,334,14792,17401,
#Partially deleted in new
chr5	149406832	149424424	chr5:149406832-149424424	1	+	149406832	149406832	8553170	4	24,56,121,335,	0,190,14648,17257,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	149406876	149425662	chr5:149406876-149425662	0	+	149406876	149406876	8553170	4	202,121,308,566,	0,14604,17213,18220,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	149406877	149428674	chr5:149406877-149428674	3	+	149406877	149406877	8553170	6	201,397,121,124,2305,802,	0,8643,14603,16308,17212,20995,
#Partially deleted in new
chr5	149406877	149421626	chr5:149406877-149421626	0	+	149406877	149406877	8553170	3	201,64,146,	0,13603,14603,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	149406878	149428678	chr5:149406878-149428678	1	+	149406878	149406878	8553170	2	200,8198,	0,13602,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	149406879	149432835	chr5:149406879-149432835	1	+	149406879	149406879	789624	5	199,121,308,157,1921,	0,14601,17210,22003,24035,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	149406962	149414097	chr5:149406962-149414097	1	+	149406962	149406962	8553170	2	1195,3936,	0,3199,
#Partially deleted in new
chr5	149406963	149420937	chr5:149406963-149420937	0	+	149406963	149406963	8553170	2	115,457,	0,13517,
#Partially deleted in new
chr5	149406963	149424381	chr5:149406963-149424381	1	+	149406963	149406963	8553170	4	115,64,121,292,	0,13517,14517,17126,
#Partially deleted in new
chr5	149406963	149421941	chr5:149406963-149421941	0	+	149406963	149406963	8553170	2	115,461,	0,14517,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	149407244	149412768	chr5:149407244-149412768	0	+	149407244	149407244	8553170	1	5524,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	149425770	149428289	chr5:149425770-149428289	3	-	149425770	149425770	8553170	2	116,306,	0,2213,
#Deleted in new
chr5	149428917	149429023	chr5:149428917-149429023	3	+	149428917	149428917	5263520	1	106,	0,
#Partially deleted in new
chr5	149430645	149430733	chr5:149430645-149430733	3	+	149430645	149430645	5263520	1	88,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	149492196	149551397	chr5:149492196-149551397	1	-	149496852	149550964	0	10	4664,113,107,75,79,140,99,127,107,556,	0,13286,14830,17682,19597,20873,28093,32848,57878,58645,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	149494313	149504670	chr5:149494313-149504670	3	-	149494313	149494313	8553170	2	4980,3656,	0,6701,
#Partially deleted in new
chr5	149495895	149551552	chr5:149495895-149551552	1	-	149496852	149550964	0	10	965,149,107,75,79,140,99,127,107,711,	0,9551,11131,13983,15898,17174,24394,29149,54179,54946,
#Partially deleted in new
chr5	149496053	149550299	chr5:149496053-149550299	1	-	149496852	149525134	789624	9	807,113,107,75,79,140,99,127,225,	0,9429,10973,13825,15740,17016,24236,28991,54021,
#Partially deleted in new
chr5	149496053	149550299	chr5:149496053-149550299	1	-	149496852	149525134	789624	10	807,113,107,75,79,140,84,99,127,225,	0,9429,10973,13825,15740,17016,21740,24236,28991,54021,
#Partially deleted in new
chr5	149496587	149513221	chr5:149496587-149513221	1	-	149496852	149511859	789624	6	273,149,107,75,79,152,	0,8859,10439,13291,15206,16482,
#Partially deleted in new
chr5	149496852	149550964	chr5:149496852-149550964	3	-	149496852	149550964	0	11	8,149,107,75,79,140,84,99,127,107,123,	0,8594,10174,13026,14941,16217,20941,23437,28192,53222,53989,
#Partially deleted in new
chr5	149499162	149513120	chr5:149499162-149513120	0	-	149501130	149513120	789624	7	131,208,149,107,75,79,51,	0,1852,6284,7864,10716,12631,13907,
#Partially deleted in new
chr5	149504845	149513157	chr5:149504845-149513157	0	-	149505441	149513157	789624	5	750,107,75,79,88,	0,2181,5033,6948,8224,
#Partially deleted in new
chr5	149504845	149513212	chr5:149504845-149513212	1	-	149505441	149509908	789624	4	750,107,75,143,	0,2181,5033,8224,
#Partially deleted in new
chr5	149525134	149551356	chr5:149525134-149551356	0	-	149529712	149550964	789624	4	37,116,107,515,	0,4469,24940,25707,
#Deleted in new
chr5	149545382	149545810	chr5:149545382-149545810	7	-	149545382	149545382	16724991	1	428,	0,
#Deleted in new
chr5	149549327	149551168	chr5:149549327-149551168	1	-	149549473	149550964	789624	3	186,107,327,	0,747,1514,
#Partially deleted in new
chr5	149551946	149601231	chr5:149551946-149601231	0	+	149597769	149601231	789624	3	177,197,124,	0,45812,49161,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	149581472	149634968	chr5:149581472-149634968	3	+	149597769	149632191	789624	13	152,197,124,148,200,131,105,111,330,129,196,158,2987,	0,16286,19635,28075,35094,36703,37465,38881,40260,42539,45603,47336,50509,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	149606636	149606741	chr5:149606636-149606741	3	-	149606636	149606636	8553170	1	105,	0,
#Partially deleted in new
chr5	149626896	149632036	chr5:149626896-149632036	0	+	149626896	149626896	8553170	3	375,158,55,	0,1912,5085,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	149722069	149722372	chr5:149722069-149722372	3	+	149722069	149722069	8553170	1	303,	0,
#Partially deleted in new
chr5	149730297	149847562	chr5:149730297-149847562	1	+	149730342	149847558	0	11	123,174,213,1123,37,65,811,76,122,155,105,	0,90135,96375,102358,104376,105003,105965,109743,111958,115462,117160,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	149730300	149847704	chr5:149730300-149847704	1	+	149730342	149845997	0	11	120,174,213,117,1123,37,65,811,76,122,1945,	0,90132,96372,100466,102355,104373,105000,105962,109740,111955,115459,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	149730302	149817746	chr5:149730302-149817746	0	+	149730302	149730302	8553170	4	118,133,181,134,	0,9690,31129,87310,
#Partially deleted in new
chr5	149730310	149855022	chr5:149730310-149855022	3	+	149730342	149847558	0	12	110,174,213,117,1123,37,65,811,76,122,155,7565,	0,90122,96362,100456,102345,104363,104990,105952,109730,111945,115449,117147,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	149732824	149732890	chr5:149732824-149732890	3	+	149732824	149732824	5263520	1	66,	0,
#Partially deleted in new
chr5	149771939	149847627	chr5:149771939-149847627	1	+	149772136	149847558	0	11	200,174,213,1123,37,65,811,76,122,155,170,	0,48493,54733,60716,62734,63361,64323,68101,70316,73820,75518,
#Partially deleted in new
chr5	149833014	149847718	chr5:149833014-149847718	0	+	149833014	149847506	789624	8	764,37,65,811,76,122,155,427,	0,1659,2286,3248,7026,9241,12745,14277,
#Partially deleted in new
chr5	149845642	149847757	chr5:149845642-149847757	0	+	149845642	149845642	8553170	2	272,300,	0,1815,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr5	149857954	149944793	chr5:149857954-149944793	1	-	149860894	149944673	789624	21	576,1080,148,84,75,64,108,101,88,110,108,147,66,144,150,48,67,65,75,141,594,	0,1937,5164,8215,9770,10140,25474,26524,26825,28310,37228,38401,38756,40408,41420,45693,49357,56988,63680,73073,86245,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr5	149857955	149944793	chr5:149857955-149944793	3	-	149860894	149944673	789624	22	3016,148,84,75,64,108,101,88,110,108,147,66,144,150,48,67,65,75,141,90,153,594,	0,5163,8214,9769,10139,25473,26523,26824,28309,37227,38400,38755,40407,41419,45692,49356,56987,63679,73072,75974,76610,86244,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr5	149857955	149944793	chr5:149857955-149944793	0	-	149857955	149857955	8553170	20	3016,148,84,75,64,108,101,88,110,108,421,150,48,67,65,75,141,90,153,594,	0,5163,8214,9769,10139,25473,26523,26824,28309,37227,38400,41419,45692,49356,56987,63679,73072,75974,76610,86244,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr5	149857956	149944793	chr5:149857956-149944793	1	-	149860894	149944673	789624	20	3015,148,84,75,64,108,101,88,110,108,147,66,144,150,48,67,65,75,141,594,	0,5162,8213,9768,10138,25472,26522,26823,28308,37226,38399,38754,40406,41418,45691,49355,56986,63678,73071,86243,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	149860653	149867892	chr5:149860653-149867892	0	-	149860653	149860653	8553170	3	318,148,1723,	0,2465,5516,
#Deleted in new
chr5	149932013	149932668	chr5:149932013-149932668	7	-	149932013	149932013	16724991	1	655,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	149940029	149940131	chr5:149940029-149940131	3	-	149940029	149940029	8553170	1	102,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	149960736	149987405	chr5:149960736-149987405	3	+	149977652	149981813	789624	3	243,724,7113,	0,16891,19556,
#Partially deleted in new
chr5	149960784	149977722	chr5:149960784-149977722	0	+	149977652	149977722	789624	3	195,280,95,	0,1208,16843,
#Partially deleted in new
chr5	149977979	149993455	chr5:149977979-149993455	0	+	149977979	149993212	789624	2	372,246,	0,15230,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	149993117	150001167	chr5:149993117-150001167	3	-	149994782	149996348	789624	2	3312,694,	0,7356,
#Partially deleted in new
chr5	149994727	150000654	chr5:149994727-150000654	1	-	149994782	149996348	789624	2	1702,727,	0,5200,
#Deleted in new
chr5	149999839	150000653	chr5:149999839-150000653	0	-	149999839	149999839	8553170	2	477,180,	0,634,
#Partially deleted in new
chr5	150000045	150053142	chr5:150000045-150053142	1	+	150000045	150052192	789624	21	10,726,139,175,498,99,132,419,176,98,99,150,302,128,132,185,220,134,117,210,1418,	0,408,4805,6427,10065,12209,18520,24216,26660,26974,30695,32408,36590,37354,40702,41739,45420,47578,48523,50206,51679,
#Partially deleted in new
chr5	150000320	150052823	chr5:150000320-150052823	1	+	150004852	150052192	789624	21	859,139,175,498,99,132,147,176,176,98,99,150,302,128,132,185,220,134,117,210,1099,	0,4530,6152,9790,11934,18245,23941,24184,26385,26699,30420,32133,36315,37079,40427,41464,45145,47303,48248,49931,51404,
#Partially deleted in new
chr5	150000717	150052823	chr5:150000717-150052823	3	+	150004852	150052192	789624	20	462,139,175,498,99,132,419,176,98,99,150,302,128,132,185,220,134,117,210,1099,	0,4133,5755,9393,11537,17848,23544,25988,26302,30023,31736,35918,36682,40030,41067,44748,46906,47851,49534,51007,
#Deleted in new
chr5	150014784	150015154	chr5:150014784-150015154	7	-	150014784	150014784	16724991	1	370,	0,
#Partially deleted in new
chr5	150021566	150021921	chr5:150021566-150021921	7	-	150021566	150021566	16724991	1	355,	0,
#Partially deleted in new
chr5	150027062	150047757	chr5:150027062-150047757	0	+	150027062	150040780	789624	7	55,99,150,132,185,220,134,	0,3678,5391,13685,14722,18403,20561,
#Partially deleted in new
chr5	150030316	150040823	chr5:150030316-150040823	0	+	150030316	150030316	8553170	3	523,150,76,	0,2137,10431,
#Deleted in new
chr5	150047484	150050441	chr5:150047484-150050441	0	+	150047484	150047484	8553170	3	273,117,190,	0,1084,2767,
#Partially deleted in new
chr5	150053290	150113372	chr5:150053290-150113372	3	-	150054068	150086427	0	22	934,109,100,112,123,98,89,163,111,105,127,116,191,121,116,193,160,137,285,258,229,112,	0,1031,1946,2735,2928,3996,4213,6409,7571,8200,8432,14924,16582,16891,17165,20010,23985,24821,26761,27476,33088,59970,
#Partially deleted in new
chr5	150053290	150086590	chr5:150053290-150086590	0	-	150057545	150086427	789624	20	934,109,100,112,123,98,89,111,105,127,116,191,121,116,193,160,137,285,258,212,	0,1031,1946,2735,2928,3996,4213,7571,8200,8432,14924,16582,16891,17165,20010,23985,24821,26761,27476,33088,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	150053837	150054820	chr5:150053837-150054820	0	-	150053837	150053837	8553170	2	387,499,	0,484,
#Partially deleted in new
chr5	150056025	150061668	chr5:150056025-150061668	0	-	150058260	150061668	789624	7	112,123,98,89,117,111,73,	0,193,1261,1478,2129,4836,5570,
#Partially deleted in new
chr5	150059777	150067181	chr5:150059777-150067181	0	-	150059777	150059777	8553170	4	85,111,359,156,	0,1084,1713,7248,
#Partially deleted in new
chr5	150059777	150067181	chr5:150059777-150067181	0	-	150059777	150059777	8553170	5	85,111,105,127,156,	0,1084,1713,1945,7248,
#Partially deleted in new
chr5	150070539	150086427	chr5:150070539-150086427	1	-	150070539	150086427	0	6	32,160,137,285,258,49,	0,6736,7572,9512,10227,15839,
#Partially deleted in new
chr5	150076903	150086554	chr5:150076903-150086554	0	-	150076903	150076903	8553170	5	532,137,285,258,176,	0,1208,3148,3863,9475,
#Partially deleted in new
chr5	150080051	150113372	chr5:150080051-150113372	0	-	150080051	150080199	789624	3	285,258,112,	0,715,33209,
#Deleted in new
chr5	150094301	150095048	chr5:150094301-150095048	7	+	150094301	150094301	16724991	1	747,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	150098405	150098506	chr5:150098405-150098506	3	+	150098405	150098405	8553170	1	101,	0,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr5	150113836	150155860	chr5:150113836-150155860	3	-	150115762	150137047	0	23	2110,233,106,100,112,123,119,161,160,111,105,133,95,212,124,116,193,175,128,267,324,46,464,	0,3781,4910,5630,6175,7051,7367,8043,9205,10413,10890,11608,12683,15920,16702,18142,18913,19749,20044,20913,21718,23171,41560,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	150113841	150114958	chr5:150113841-150114958	0	-	150113841	150113841	8553170	2	197,209,	0,908,
#Partially deleted in new
chr5	150115726	150155859	chr5:150115726-150155859	0	-	150133953	150137047	789624	23	220,233,106,100,112,123,119,161,160,111,105,133,95,212,124,116,193,175,128,301,324,46,463,	0,1891,3020,3740,4285,5161,5477,6153,7315,8523,9000,9718,10793,14030,14812,16252,17023,17859,18154,18989,19828,21281,39670,
#Deleted in new
chr5	150119466	150122202	chr5:150119466-150122202	0	-	150119466	150119466	8553170	6	100,112,123,119,190,68,	0,545,1421,1737,2413,2668,
#Deleted in new
chr5	150120926	150122237	chr5:150120926-150122237	0	-	150120926	150120926	8553170	4	84,119,161,36,	0,277,953,1275,
#Deleted in new
chr5	150124169	150125520	chr5:150124169-150125520	0	-	150124169	150124169	8553170	2	662,76,	0,1275,
#Deleted in new
chr5	150133694	150134110	chr5:150133694-150134110	0	-	150133694	150133694	8553170	2	66,230,	0,186,
#Partially deleted in new
chr5	150134749	150155627	chr5:150134749-150155627	0	-	150134749	150135726	789624	3	267,324,231,	0,805,20647,
#Deleted in new
chr5	150134856	150137437	chr5:150134856-150137437	0	-	150134856	150137047	789624	4	160,324,46,38,	0,698,2151,2543,
#Partially deleted in new
chr5	150137303	150155860	chr5:150137303-150155860	0	-	150137303	150137303	8553170	2	147,464,	0,18093,
#Partially deleted in new
chr5	150153410	150155872	chr5:150153410-150155872	0	-	150153410	150153410	8553170	2	547,476,	0,1986,
#Partially deleted in new
chr5	150166794	150184558	chr5:150166794-150184558	3	+	150166876	150183680	0	3	527,146,1085,	0,15973,16679,
#Partially deleted in new
chr5	150166889	150184558	chr5:150166889-150184558	1	+	150166889	150183680	789624	4	23,89,146,1085,	0,343,15878,16584,
#Partially deleted in new
chr5	150189956	150211072	chr5:150189956-150211072	3	+	150190327	150209615	789624	14	404,184,132,235,139,135,104,125,113,132,100,101,168,1667,	0,4771,6759,7085,9271,11132,12390,12622,13710,13950,14575,14870,15499,19449,
#Partially deleted in new
chr5	150190084	150222788	chr5:150190084-150222788	1	+	150190327	150222601	789624	16	276,184,132,235,139,135,104,125,113,132,100,101,168,128,155,204,	0,4643,6631,6957,9143,11004,12262,12494,13582,13822,14447,14742,15371,19321,27459,32500,
#Partially deleted in new
chr5	150190250	150195204	chr5:150190250-150195204	0	+	150190250	150190250	8553170	2	110,477,	0,4477,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr5	150219490	150290291	chr5:150219490-150290291	1	-	150222709	150289625	0	18	3223,229,95,76,49,41,43,84,123,95,84,103,73,66,55,60,95,728,	0,3498,8701,11814,19209,25670,28281,30735,31197,32259,32491,33953,37082,37275,38072,45465,53574,70073,
#Partially deleted in new
chr5	150221773	150245328	chr5:150221773-150245328	0	-	150221773	150221773	8553170	6	940,229,95,76,49,168,	0,1215,6418,9531,16926,23387,
#Partially deleted in new
chr5	150222690	150289629	chr5:150222690-150289629	3	-	150222709	150289625	0	19	23,229,95,76,49,33,41,43,84,123,95,84,103,73,66,55,60,95,66,	0,298,5501,8614,16009,17013,22470,25081,27535,27997,29059,29291,30753,33882,34075,34872,42265,50374,66873,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr5	150238288	150289773	chr5:150238288-150289773	0	-	150238288	150238288	8553170	14	460,33,41,43,84,123,95,84,103,73,66,55,95,210,	0,1415,6872,9483,11937,12399,13461,13693,15155,18284,18477,19274,34776,51275,
#Partially deleted in new
chr5	150253500	150265397	chr5:150253500-150265397	0	-	150253500	150256599	789624	6	46,73,66,55,60,257,	0,3072,3265,4062,11455,11640,
#Partially deleted in new
chr5	150257562	150290064	chr5:150257562-150290064	0	-	150257562	150289625	789624	5	55,60,95,160,170,	0,7393,15502,32001,32332,
#Partially deleted in new
chr5	150265141	150289787	chr5:150265141-150289787	0	-	150265141	150265141	8553170	3	235,95,224,	0,7923,24422,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	150296342	150302953	chr5:150296342-150302953	3	-	150297213	150302373	789624	2	2270,891,	0,5720,
#Partially deleted in new
chr5	150297213	150339307	chr5:150297213-150339307	1	-	150297213	150298494	789624	2	1399,30,	0,42064,
#Partially deleted in new
chr5	150298234	150339293	chr5:150298234-150339293	0	-	150298234	150298494	789624	2	378,94,	0,40965,
#Partially deleted in new
chr5	150357628	150398429	chr5:150357628-150398429	0	+	150357746	150398429	8553170	23	226,56,140,74,187,74,213,195,210,216,189,249,198,138,180,201,187,137,220,86,181,561,76,	0,3527,6484,10215,11087,11900,16545,16988,17325,17710,18092,18453,18794,21276,21600,21903,30273,32258,34328,35076,35743,38653,40725,
#Partially deleted in new
chr5	150357638	150400307	chr5:150357638-150400307	3	+	150357746	150399048	789624	27	216,56,140,74,187,74,231,213,195,210,216,189,249,198,138,180,201,187,137,114,220,83,181,561,98,49,498,	0,3517,6474,10205,11077,11890,14367,16535,16978,17315,17700,18082,18443,18784,21266,21590,21893,30263,32248,33905,34318,35069,35733,38643,40715,41383,42171,
#Partially deleted in new
chr5	150357665	150400292	chr5:150357665-150400292	1	+	150357746	150399048	789624	26	189,56,140,74,187,74,213,195,210,216,189,249,198,138,180,201,187,137,114,220,86,181,561,98,49,483,	0,3490,6447,10178,11050,11863,16508,16951,17288,17673,18055,18416,18757,21239,21563,21866,30236,32221,33878,34291,35039,35706,38616,40688,41356,42144,
#Partially deleted in new
chr5	150357671	150400308	chr5:150357671-150400308	1	+	150357746	150399048	789624	26	183,56,140,74,187,74,213,195,210,216,189,249,198,138,180,201,187,137,114,220,83,181,561,98,49,499,	0,3484,6441,10172,11044,11857,16502,16945,17282,17667,18049,18410,18751,21233,21557,21860,30230,32215,33872,34285,35036,35700,38610,40682,41350,42138,
#Partially deleted in new
chr5	150357687	150400296	chr5:150357687-150400296	1	+	150357746	150399048	789624	27	167,56,140,74,187,74,231,213,195,210,216,189,249,198,138,180,201,187,137,114,220,86,181,561,98,49,487,	0,3468,6425,10156,11028,11841,14318,16486,16929,17266,17651,18033,18394,18735,21217,21541,21844,30214,32199,33856,34269,35017,35684,38594,40666,41334,42122,
#Partially deleted in new
chr5	150357703	150384253	chr5:150357703-150384253	1	+	150357746	150383755	789624	19	151,56,140,74,187,74,231,213,195,210,216,189,249,198,138,180,201,108,516,	0,3452,6409,10140,11012,11825,14302,16470,16913,17250,17635,18017,18378,18719,21201,21525,21828,25361,26034,
#Partially deleted in new
chr5	150357703	150400293	chr5:150357703-150400293	1	+	150357746	150399048	789624	27	151,56,140,74,187,74,231,213,195,210,216,189,249,198,138,180,201,187,137,114,220,86,181,561,98,49,484,	0,3452,6409,10140,11012,11825,14302,16470,16913,17250,17635,18017,18378,18719,21201,21525,21828,30198,32183,33840,34253,35001,35668,38578,40650,41318,42106,
#Partially deleted in new
chr5	150357703	150375011	chr5:150357703-150375011	0	+	150357746	150375011	789624	8	151,56,140,74,187,74,195,58,	0,3452,6409,10140,11012,11825,16913,17250,
#Partially deleted in new
chr5	150357713	150400042	chr5:150357713-150400042	1	+	150357746	150399048	789624	26	141,56,140,74,187,74,231,213,195,210,216,189,249,198,138,180,201,187,137,220,86,181,561,98,49,233,	0,3442,6399,10130,11002,11815,14292,16460,16903,17240,17625,18007,18368,18709,21191,21515,21818,30188,32173,34243,34991,35658,38568,40640,41308,42096,
#Partially deleted in new
chr5	150357717	150384249	chr5:150357717-150384249	1	+	150357746	150383755	789624	18	137,56,140,74,187,74,231,213,195,210,216,189,249,198,138,180,201,512,	0,3438,6395,10126,10998,11811,14288,16456,16899,17236,17621,18003,18364,18705,21187,21511,21814,26020,
#Partially deleted in new
chr5	150357718	150400206	chr5:150357718-150400206	1	+	150357746	150399048	789624	26	136,56,140,74,187,74,231,213,195,210,216,189,249,198,138,180,201,187,137,220,83,181,561,98,49,397,	0,3437,6394,10125,10997,11810,14287,16455,16898,17235,17620,18002,18363,18704,21186,21510,21813,30183,32168,34238,34989,35653,38563,40635,41303,42091,
#Partially deleted in new
chr5	150357746	150399048	chr5:150357746-150399048	1	+	150357746	150399048	789624	26	108,56,140,74,187,74,231,213,195,210,216,189,249,198,138,180,201,187,137,114,220,83,181,561,98,27,	0,3409,6366,10097,10969,11782,14259,16427,16870,17207,17592,17974,18335,18676,21158,21482,21785,30155,32140,33797,34210,34961,35625,38535,40607,41275,
#Partially deleted in new
chr5	150357746	150399966	chr5:150357746-150399966	1	+	150357746	150399048	789624	27	108,56,140,74,187,74,231,213,195,210,216,189,249,198,138,180,201,111,187,137,220,86,181,561,98,49,157,	0,3409,6366,10097,10969,11782,14259,16427,16870,17207,17592,17974,18335,18676,21158,21482,21785,25315,30155,32140,34210,34958,35625,38535,40607,41275,42063,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	150357758	150372201	chr5:150357758-150372201	0	+	150357758	150364941	789624	8	96,56,140,151,74,187,74,196,	0,3397,6354,7148,10085,10957,11770,14247,
#Partially deleted in new
chr5	150357782	150399881	chr5:150357782-150399881	0	+	150357782	150399048	789624	8	72,56,140,74,100,98,49,72,	0,3373,6330,10061,38960,40571,41239,42027,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	150367572	150380859	chr5:150367572-150380859	0	+	150367572	150367572	8553170	10	1330,74,231,213,938,610,198,138,180,1328,	0,1956,4433,6601,7044,8148,8850,11332,11656,11959,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	150374733	150394916	chr5:150374733-150394916	0	+	150374733	150374733	8553170	13	78,210,216,189,249,198,138,180,201,187,137,252,2960,	0,220,605,987,1348,1689,4171,4495,4798,13168,15153,16810,17223,
#Deleted in new
chr5	150378609	150379644	chr5:150378609-150379644	0	+	150378609	150378609	8553170	4	95,138,180,113,	0,295,619,922,
#Partially deleted in new
chr5	150379275	150391795	chr5:150379275-150391795	0	+	150379275	150388053	789624	5	133,201,146,137,252,	0,256,8667,10611,12268,
#Partially deleted in new
chr5	150389946	150392891	chr5:150389946-150392891	0	+	150389946	150389946	8553170	3	77,633,187,	0,1597,2758,
#Partially deleted in new
chr5	150401636	150412769	chr5:150401636-150412769	3	-	150402583	150412749	0	6	614,63,63,80,173,145,	0,926,4622,5244,5515,10988,
#Partially deleted in new
chr5	150401669	150412929	chr5:150401669-150412929	1	-	150402239	150412749	0	8	581,63,88,96,63,80,173,305,	0,893,3010,3415,4589,5211,5482,10955,
#Partially deleted in new
chr5	150401698	150412732	chr5:150401698-150412732	0	-	150402476	150412732	789624	8	927,192,88,96,63,80,173,108,	0,1422,2981,3386,4560,5182,5453,10926,
#Partially deleted in new
chr5	150401863	150412751	chr5:150401863-150412751	1	-	150401986	150412749	789624	5	141,63,80,173,127,	0,4395,5017,5288,10761,
#Partially deleted in new
chr5	150402151	150412751	chr5:150402151-150412751	1	-	150402239	150412749	0	9	99,63,192,88,96,63,80,173,127,	0,411,969,2528,2933,4107,4729,5000,10473,
#Partially deleted in new
chr5	150402169	150412739	chr5:150402169-150412739	0	-	150403306	150412739	789624	7	81,63,192,63,80,173,115,	0,393,951,4089,4711,4982,10455,
#Partially deleted in new
chr5	150404485	150412746	chr5:150404485-150412746	0	-	150404485	150404485	8553170	6	282,96,63,80,173,122,	0,599,1773,2395,2666,8139,
#Partially deleted in new
chr5	150404663	150412751	chr5:150404663-150412751	0	-	150405172	150412749	789624	5	104,96,63,173,127,	0,421,1595,2488,7961,
#Partially deleted in new
chr5	150405315	150412751	chr5:150405315-150412751	0	-	150406287	150412749	789624	3	356,63,127,	0,943,7309,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	150405977	150412751	chr5:150405977-150412751	0	-	150405977	150405977	8553170	4	344,80,173,127,	0,903,1174,6647,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	150406038	150412912	chr5:150406038-150412912	0	-	150406038	150406038	8553170	3	283,444,288,	0,842,6586,
#Partially deleted in new
chr5	150406704	150412751	chr5:150406704-150412751	0	-	150406704	150406704	8553170	3	256,173,127,	0,447,5920,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	150442634	150449696	chr5:150442634-150449696	3	-	150444285	150447733	0	5	1719,77,162,151,205,	0,2974,4167,4950,6857,
#Partially deleted in new
chr5	150444228	150449756	chr5:150444228-150449756	1	-	150444285	150447733	0	5	125,77,162,151,54,	0,1380,2573,3356,5474,
#Partially deleted in new
chr5	150444232	150448913	chr5:150444232-150448913	1	-	150444285	150447733	0	5	121,77,162,151,81,	0,1376,2569,3352,4600,
#Partially deleted in new
chr5	150444237	150449691	chr5:150444237-150449691	1	-	150444285	150447733	0	5	116,77,162,151,206,	0,1371,2564,3347,5248,
#Partially deleted in new
chr5	150444237	150447735	chr5:150444237-150447735	0	-	150444624	150447733	789624	5	116,163,77,162,151,	0,241,1371,2564,3347,
#Partially deleted in new
chr5	150444237	150449727	chr5:150444237-150449727	0	-	150444237	150444237	8553170	3	116,77,2926,	0,1371,2564,
#Partially deleted in new
chr5	150444291	150449436	chr5:150444291-150449436	0	-	150444291	150447733	789624	5	62,77,162,151,168,	0,1317,2510,3293,4977,
#Partially deleted in new
chr5	150445423	150446937	chr5:150445423-150446937	0	-	150445423	150445423	8553170	2	262,136,	0,1378,
#Partially deleted in new
chr5	150475530	150485968	chr5:150475530-150485968	3	-	150475530	150475530	789624	3	229,71,68,	0,9698,10370,
#Partially deleted in new
chr5	150485817	150521458	chr5:150485817-150521458	0	+	150521254	150521458	789624	2	186,591,	0,35050,
#Partially deleted in new
chr5	150486293	150521731	chr5:150486293-150521731	0	+	150521254	150521731	789624	2	93,483,	0,34955,
#Partially deleted in new
chr5	150486330	150521227	chr5:150486330-150521227	0	+	150486330	150486330	8553170	2	77,360,	0,34537,
#Partially deleted in new
chr5	150497777	150553714	chr5:150497777-150553714	1	+	150521254	150553332	789624	14	202,900,495,88,155,186,129,183,97,124,175,110,103,502,	0,23090,30026,35167,37089,37922,41450,42304,43792,45070,47534,51900,53975,55435,
#Partially deleted in new
chr5	150497926	150521323	chr5:150497926-150521323	0	+	150521254	150521323	789624	2	313,456,	0,22941,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	150507639	150521102	chr5:150507639-150521102	0	+	150507639	150507639	8553170	4	59,80,122,235,	0,507,11158,13228,
#Partially deleted in new
chr5	150508111	150558211	chr5:150508111-150558211	3	+	150521254	150553332	0	15	115,900,495,88,155,186,129,183,97,124,175,171,110,103,4999,	0,12756,19692,24833,26755,27588,31116,31970,33458,34736,37200,40106,41566,43641,45101,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	150550413	150550899	chr5:150550413-150550899	0	+	150550413	150550413	8553170	1	486,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	150552560	150553711	chr5:150552560-150553711	0	+	150552560	150552560	8553170	2	70,499,	0,652,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	150601079	150654232	chr5:150601079-150654232	1	+	150618367	150650333	789624	3	109,665,6289,	0,17023,46864,
#Partially deleted in new
chr5	150608427	150615354	chr5:150608427-150615354	3	-	150608427	150608427	8553170	3	88,154,375,	0,6130,6552,
#Partially deleted in new
chr5	150617643	150652334	chr5:150617643-150652334	1	+	150618367	150650333	789624	3	42,665,4391,	0,459,30300,
#Partially deleted in new
chr5	150624714	150648914	chr5:150624714-150648914	0	+	150624714	150624714	8553170	2	139,409,	0,23791,
#Partially deleted in new
chr5	150640657	150659220	chr5:150640657-150659220	3	+	150648275	150657087	789624	3	197,2360,2817,	0,7286,15746,
#Partially deleted in new
chr5	150640677	150652337	chr5:150640677-150652337	1	+	150648275	150650333	789624	2	177,4394,	0,7266,
#Partially deleted in new
chr5	150660873	150677015	chr5:150660873-150677015	1	+	150662941	150676875	789624	7	554,62,155,54,154,163,309,	0,2067,9610,10723,10881,11466,15833,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	150660881	150679365	chr5:150660881-150679365	3	+	150662941	150676875	789624	7	198,62,155,54,154,163,2659,	0,2059,9602,10715,10873,11458,15825,
#Partially deleted in new
chr5	150662940	150670908	chr5:150662940-150670908	0	+	150662940	150662940	8553170	2	62,425,	0,7543,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	150669092	150670886	chr5:150669092-150670886	1	+	150670410	150670674	789624	2	72,959,	0,835,
#Deleted in new
chr5	150670657	150672390	chr5:150670657-150672390	3	-	150670657	150670657	8553170	2	150,275,	0,1458,
#Deleted in new
chr5	150671420	150672448	chr5:150671420-150672448	0	+	150671420	150671420	8553170	3	230,154,109,	0,334,919,
#Partially deleted in new
chr5	150671657	150676957	chr5:150671657-150676957	0	+	150671657	150671657	8553170	3	251,163,251,	0,682,5049,
#Deleted in new
chr5	150671760	150672767	chr5:150671760-150672767	0	+	150671760	150672506	789624	2	148,428,	0,579,
#Partially deleted in new
chr5	150672056	150676865	chr5:150672056-150676865	1	+	150672166	150676850	789624	2	446,159,	0,4650,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	150672651	150679363	chr5:150672651-150679363	0	+	150672651	150672651	8553170	2	633,2657,	0,4055,
#Partially deleted in new
chr5	150690793	150701107	chr5:150690793-150701107	3	-	150691750	150700985	0	11	1088,132,89,165,201,173,101,133,30,54,176,	0,2101,2425,3282,4712,5739,5997,7705,8448,9650,10138,
#Deleted in new
chr5	150690793	150694833	chr5:150690793-150694833	0	-	150690793	150690793	8553170	4	1088,132,89,758,	0,2101,2425,3282,
#Partially deleted in new
chr5	150691518	150701023	chr5:150691518-150701023	1	-	150691750	150700985	0	10	363,132,89,165,201,173,101,16,54,92,	0,1376,1700,2557,3987,5014,5272,7737,8925,9413,
#Partially deleted in new
chr5	150695323	150701046	chr5:150695323-150701046	0	-	150695323	150695323	8553170	7	383,173,101,133,30,54,115,	0,1209,1467,3175,3918,5120,5608,
#Partially deleted in new
chr5	150695693	150701014	chr5:150695693-150701014	0	-	150695693	150700985	789624	7	13,173,101,133,30,33,83,	0,839,1097,2805,3548,4750,5238,
#Partially deleted in new
chr5	150696594	150701077	chr5:150696594-150701077	0	-	150696594	150696594	8553170	5	297,133,30,54,146,	0,1904,2647,3849,4337,
#Partially deleted in new
chr5	150696666	150700621	chr5:150696666-150700621	0	-	150696666	150696666	8553170	4	225,133,30,178,	0,1832,2575,3777,
#Partially deleted in new
chr5	150696790	150700910	chr5:150696790-150700910	0	-	150696790	150700908	789624	4	101,133,30,467,	0,1708,2451,3653,
#Partially deleted in new
chr5	150708439	150759109	chr5:150708439-150759109	3	-	150711148	150758993	789624	13	2923,98,108,55,74,110,113,74,108,44,179,71,251,	0,7125,9836,11276,14467,22191,22604,22976,24928,33674,45039,47977,50419,
#Partially deleted in new
chr5	150708747	150758520	chr5:150708747-150758520	1	-	150711148	150756451	789624	13	2615,98,108,55,74,110,113,74,108,44,179,71,405,	0,6817,9528,10968,14159,21883,22296,22668,24620,33366,44731,47669,49368,
#Partially deleted in new
chr5	150710857	150759035	chr5:150710857-150759035	1	-	150711148	150758993	789624	14	505,98,108,55,74,110,113,74,21,108,44,179,71,177,	0,4707,7418,8858,12049,19773,20186,20558,21028,22510,31256,42621,45559,48001,
#Partially deleted in new
chr5	150710857	150759035	chr5:150710857-150759035	1	-	150753639	150758993	789624	15	505,98,108,55,74,110,113,74,21,108,44,179,37,71,177,	0,4707,7418,8858,12049,19773,20186,20558,21028,22510,31256,42621,44673,45559,48001,
#Partially deleted in new
chr5	150718275	150731310	chr5:150718275-150731310	0	-	150718275	150718275	8553170	5	108,55,74,110,267,	0,1440,4631,12355,12768,
#Deleted in new
chr5	150730634	150731794	chr5:150730634-150731794	0	-	150730634	150730634	8553170	3	106,113,379,	0,409,781,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	150731063	150743159	chr5:150731063-150743159	0	-	150731063	150733475	789624	5	93,74,108,44,342,	0,352,2304,11050,11754,
#Partially deleted in new
chr5	150731110	150733909	chr5:150731110-150733909	0	-	150731110	150731110	8553170	3	46,74,542,	0,305,2257,
#Partially deleted in new
chr5	150731374	150758690	chr5:150731374-150758690	0	-	150731374	150731374	8553170	6	115,108,44,179,71,130,	0,1993,10739,22104,25042,27186,
#Partially deleted in new
chr5	150731453	150758698	chr5:150731453-150758698	0	-	150731453	150756451	789624	7	36,108,44,179,71,28,113,	0,1914,10660,22025,24963,26467,27132,
#Partially deleted in new
chr5	150733383	150759020	chr5:150733383-150759020	0	-	150753639	150758993	789624	6	92,44,179,37,71,162,	0,8730,20095,22147,23033,25475,
#Partially deleted in new
chr5	150733390	150758504	chr5:150733390-150758504	0	-	150733390	150756451	789624	5	85,44,179,71,199,	0,8723,20088,23026,24915,
#Partially deleted in new
chr5	150733393	150758636	chr5:150733393-150758636	0	-	150733393	150733393	8553170	6	82,179,37,71,28,76,	0,20085,22137,23023,24527,25167,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	150733395	150734475	chr5:150733395-150734475	0	-	150733395	150733395	8553170	2	80,296,	0,784,
#Partially deleted in new
chr5	150777945	150796734	chr5:150777945-150796734	3	+	150795440	150795623	789624	2	1027,1305,	0,17484,
#Partially deleted in new
chr5	150778804	150796734	chr5:150778804-150796734	1	+	150795440	150795623	8553170	3	168,117,1305,	0,3669,16625,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	150846522	150848669	chr5:150846522-150848669	3	+	150848123	150848669	789624	2	698,961,	0,1186,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	150846802	150847487	chr5:150846802-150847487	0	+	150846802	150846802	8553170	1	685,	0,
#Partially deleted in new
chr5	150848496	150900736	chr5:150848496-150900736	0	+	150848496	150878036	789624	4	158,135,62,148,	0,29483,31088,52092,
#Partially deleted in new
chr5	150894391	150904983	chr5:150894391-150904983	3	-	150895423	150903155	789624	6	2582,123,127,42,114,280,	0,3670,4036,8749,9472,10312,
#Partially deleted in new
chr5	150894391	150904983	chr5:150894391-150904983	1	-	150895423	150898461	789624	5	2582,123,127,114,280,	0,3670,4036,9472,10312,
#Partially deleted in new
chr5	150894391	150904983	chr5:150894391-150904983	1	-	150895423	150903349	789624	7	2582,123,127,42,55,114,280,	0,3670,4036,8749,8937,9472,10312,
#Partially deleted in new
chr5	150894398	150904978	chr5:150894398-150904978	1	-	150895423	150903155	789624	6	2571,127,127,42,114,275,	0,3659,4029,8742,9465,10305,
#Partially deleted in new
chr5	150894398	150904789	chr5:150894398-150904789	1	-	150898053	150903155	789624	5	3786,127,42,114,86,	0,4029,8742,9465,10305,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	150930644	150945059	chr5:150930644-150945059	5	-	150930644	150930644	16724991	4	1646,96,127,1246,	0,11573,11905,13169,
#Partially deleted in new
chr5	150930762	150946289	chr5:150930762-150946289	7	-	150930762	150930762	16724991	5	1528,96,127,59,12,	0,11455,11787,13051,15515,
#Partially deleted in new
chr5	150950108	150952460	chr5:150950108-150952460	7	-	150950108	150950108	16724991	3	242,416,108,	0,647,2244,
#Deleted in new
chr5	150978418	150979175	chr5:150978418-150979175	7	+	150978418	150978418	16724991	1	757,	0,
#Deleted in new
chr5	151020437	151028992	chr5:151020437-151028992	1	+	151020654	151028130	789624	6	304,129,22,118,100,1084,	0,4902,5034,6462,6994,7471,
#Deleted in new
chr5	151020562	151028993	chr5:151020562-151028993	3	+	151020654	151028130	0	5	179,154,118,100,1085,	0,4777,6337,6869,7346,
#Deleted in new
chr5	151020588	151028987	chr5:151020588-151028987	1	+	151020654	151025471	789624	6	153,154,118,100,868,85,	0,4751,6311,6843,7320,8314,
#Deleted in new
chr5	151020591	151026870	chr5:151020591-151026870	0	+	151020591	151020591	8553170	3	150,154,160,	0,4748,6119,
#Deleted in new
chr5	151020603	151027461	chr5:151020603-151027461	0	+	151020654	151027461	789624	5	138,27,154,118,30,	0,224,4736,6296,6828,
#Deleted in new
chr5	151020605	151028166	chr5:151020605-151028166	1	+	151020654	151027529	789624	4	136,118,100,258,	0,6294,6826,7303,
#Deleted in new
chr5	151020605	151027017	chr5:151020605-151027017	0	+	151020654	151020932	789624	4	136,426,154,118,	0,222,4734,6294,
#Deleted in new
chr5	151021436	151021870	chr5:151021436-151021870	0	+	151021436	151021436	8553170	1	434,	0,
#Deleted in new
chr5	151025343	151028954	chr5:151025343-151028954	0	+	151025343	151028164	789624	3	150,118,1046,	0,1556,2565,
#Deleted in new
chr5	151026444	151027490	chr5:151026444-151027490	0	+	151026444	151026444	8553170	2	573,59,	0,987,
#Deleted in new
chr5	151026965	151027985	chr5:151026965-151027985	0	+	151026965	151027908	789624	3	52,100,164,	0,466,856,
#Partially deleted in new
chr5	151029944	151081016	chr5:151029944-151081016	1	-	151030712	151063724	789624	17	803,97,192,66,126,132,129,132,66,90,124,95,192,78,86,135,137,	0,2342,3663,5057,5637,6845,9152,12595,12951,15916,19879,22220,26821,30373,32182,33668,50935,
#Partially deleted in new
chr5	151029946	151081084	chr5:151029946-151081084	1	-	151032319	151065095	789624	18	801,114,192,66,126,132,129,132,66,90,124,95,192,78,86,135,172,205,	0,2340,3661,5055,5635,6843,9150,12593,12949,15914,19877,22218,26819,30371,32180,33666,35013,50933,
#Partially deleted in new
chr5	151029946	151081084	chr5:151029946-151081084	1	-	151030663	151065095	789624	16	801,66,126,132,129,132,66,90,124,95,192,78,86,135,172,205,	0,5055,5635,6843,9150,12593,12949,15914,19877,22218,26819,30371,32180,33666,35013,50933,
#Partially deleted in new
chr5	151029948	151087158	chr5:151029948-151087158	3	-	151030712	151065095	789624	18	799,97,192,66,126,132,129,132,66,90,124,95,192,78,86,135,172,74,	0,2338,3659,5053,5633,6841,9148,12591,12947,15912,19875,22216,26817,30369,32178,33664,35011,57136,
#Partially deleted in new
chr5	151029948	151039198	chr5:151029948-151039198	0	-	151030069	151039198	789624	5	175,27,126,132,102,	0,5092,5633,6841,9148,
#Partially deleted in new
chr5	151029948	151087158	chr5:151029948-151087158	1	-	151030641	151065095	789624	18	725,97,192,66,126,132,129,132,66,90,124,95,192,78,86,135,172,74,	0,2338,3659,5053,5633,6841,9148,12591,12947,15912,19875,22216,26817,30369,32178,33664,35011,57136,
#Partially deleted in new
chr5	151029960	151081054	chr5:151029960-151081054	1	-	151030712	151065095	789624	17	787,97,66,126,132,129,132,66,90,124,95,192,78,86,135,172,175,	0,2326,5041,5621,6829,9136,12579,12935,15900,19863,22204,26805,30357,32166,33652,34999,50919,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	151030483	151037438	chr5:151030483-151037438	0	-	151030483	151030483	8553170	6	264,97,192,66,126,649,	0,1803,3124,4518,5098,6306,
#Partially deleted in new
chr5	151030491	151087660	chr5:151030491-151087660	1	-	151030712	151065095	789624	18	256,97,192,66,126,132,129,132,66,90,124,95,192,78,86,135,172,70,	0,1795,3116,4510,5090,6298,8605,12048,12404,15369,19332,21673,26274,29826,31635,33121,34468,57099,
#Partially deleted in new
chr5	151030580	151081074	chr5:151030580-151081074	1	-	151030641	151065095	789624	18	93,97,192,66,126,132,129,132,66,90,124,95,192,78,86,135,172,195,	0,1706,3027,4421,5001,6209,8516,11959,12315,15280,19243,21584,26185,29737,31546,33032,34379,50299,
#Partially deleted in new
chr5	151030580	151063747	chr5:151030580-151063747	0	-	151033528	151063724	789624	16	167,97,100,66,126,132,129,132,66,90,124,95,192,78,86,135,	0,1706,2899,4421,5001,6209,8516,11959,12315,15280,19243,21584,26185,29737,31546,33032,
#Partially deleted in new
chr5	151030580	151081074	chr5:151030580-151081074	1	-	151030712	151065095	789624	18	167,97,192,66,126,132,129,132,66,90,124,95,192,78,86,135,172,195,	0,1706,3027,4421,5001,6209,8516,11959,12315,15280,19243,21584,26185,29737,31546,33032,34379,50299,
#Partially deleted in new
chr5	151030618	151065095	chr5:151030618-151065095	1	-	151030663	151065095	789624	15	129,66,126,132,129,132,66,90,124,95,192,78,86,135,136,	0,4383,4963,6171,8478,11921,12277,15242,19205,21546,26147,29699,31508,32994,34341,
#Partially deleted in new
chr5	151030688	151065095	chr5:151030688-151065095	1	-	151030712	151065095	789624	16	59,97,66,126,132,129,132,66,90,124,95,192,78,86,135,136,	0,1598,4313,4893,6101,8408,11851,12207,15172,19135,21476,26077,29629,31438,32924,34271,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	151032049	151049903	chr5:151032049-151049903	0	-	151032049	151032049	8553170	3	816,30,80,	0,13871,17774,
#Deleted in new
chr5	151034495	151035654	chr5:151034495-151035654	0	-	151034495	151034495	8553170	2	572,73,	0,1086,
#Partially deleted in new
chr5	151042897	151046361	chr5:151042897-151046361	0	-	151042897	151042897	8553170	2	64,501,	0,2963,
#Partially deleted in new
chr5	151045865	151087166	chr5:151045865-151087166	0	-	151045865	151063724	789624	8	85,124,95,192,78,86,135,82,	0,3958,6299,10900,14452,16261,17747,41219,
#Partially deleted in new
chr5	151060321	151081034	chr5:151060321-151081034	0	-	151060321	151065095	789624	6	74,86,135,172,36,155,	0,1805,3291,4638,20002,20558,
#Partially deleted in new
chr5	151060353	151093577	chr5:151060353-151093577	0	-	151060353	151065095	789624	5	42,86,135,172,140,	0,1773,3259,4606,33084,
#Partially deleted in new
chr5	151078402	151081015	chr5:151078402-151081015	0	-	151078402	151078402	8553170	3	41,287,136,	0,1670,2477,
#Partially deleted in new
chr5	151100711	151105272	chr5:151100711-151105272	0	-	151100888	151105272	789624	4	251,49,123,28,	0,747,2858,4533,
#Partially deleted in new
chr5	151101104	151157882	chr5:151101104-151157882	3	-	151101447	151147901	0	26	403,123,59,96,94,18,54,80,91,114,95,82,79,59,123,59,96,94,57,80,91,114,95,91,43,203,	0,2465,4140,7350,8648,9522,16022,16653,18195,21042,21812,23181,25297,27076,28302,30126,31371,31989,33322,35151,36126,37573,38248,39048,46779,56575,
#Partially deleted in new
chr5	151101108	151157752	chr5:151101108-151157752	1	-	151101447	151147901	789624	14	399,123,59,96,94,18,54,80,91,114,95,91,43,73,	0,2461,4136,7346,8644,9518,16018,16649,18191,21038,38244,39044,46775,56571,
#Partially deleted in new
chr5	151101108	151141640	chr5:151101108-151141640	1	-	151101447	151140165	0	25	399,123,59,96,94,18,54,80,91,114,95,82,79,59,123,59,96,94,57,80,91,114,95,91,108,	0,2461,4136,7346,8644,9518,16018,16649,18191,21038,21808,23177,25293,27072,28298,30122,31367,31985,33318,35147,36122,37569,38244,39044,40424,
#Partially deleted in new
chr5	151101143	151157760	chr5:151101143-151157760	1	-	151101447	151147901	789624	19	364,123,59,96,94,54,80,91,114,95,82,79,59,73,20,95,91,43,81,	0,2426,4101,7311,8609,15983,16614,18156,21003,21773,23142,25258,27037,28263,37628,38209,39009,46740,56536,
#Partially deleted in new
chr5	151101479	151157747	chr5:151101479-151157747	0	-	151101479	151147901	789624	7	28,123,114,95,91,43,68,	0,2090,37198,37873,38673,46404,56200,
#Partially deleted in new
chr5	151119373	151157767	chr5:151119373-151157767	0	-	151126420	151147901	789624	10	17,114,95,82,45,58,95,91,43,88,	0,2773,3543,4912,7028,19360,19979,20779,28510,38306,
#Partially deleted in new
chr5	151122220	151128371	chr5:151122220-151128371	0	-	151122220	151122220	8553170	5	40,95,82,79,191,	0,696,2065,4181,5960,
#Partially deleted in new
chr5	151126444	151133323	chr5:151126444-151133323	0	-	151126444	151126444	8553170	6	36,59,123,59,96,230,	0,1736,2962,4786,6031,6649,
#Partially deleted in new
chr5	151129459	151157765	chr5:151129459-151157765	0	-	151133162	151147901	789624	10	70,59,96,94,47,114,95,91,43,86,	0,1771,3016,3634,7815,9218,9893,10693,18424,28220,
#Partially deleted in new
chr5	151134426	151141655	chr5:151134426-151141655	0	-	151134426	151140165	789624	8	57,80,91,114,95,91,229,123,	0,1829,2804,4251,4926,5726,5900,7106,
#Partially deleted in new
chr5	151136259	151157765	chr5:151136259-151157765	0	-	151136259	151140165	789624	6	76,91,114,95,91,86,	0,971,2418,3093,3893,21420,
#Partially deleted in new
chr5	151137212	151157785	chr5:151137212-151157785	0	-	151137212	151137212	8553170	5	109,770,91,43,106,	0,1465,2940,10671,20467,
#Partially deleted in new
chr5	151137308	151151479	chr5:151137308-151151479	0	-	151137308	151147901	789624	6	13,114,95,91,43,567,	0,1369,2044,2844,10575,13604,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	151154884	151157761	chr5:151154884-151157761	0	-	151154884	151154884	8553170	2	817,82,	0,2795,
#Deleted in new
chr5	151158105	151158462	chr5:151158105-151158462	3	-	151158105	151158105	8553170	2	213,35,	0,322,
#Partially deleted in new
chr5	151173980	151180617	chr5:151173980-151180617	7	+	151173980	151173980	16724991	5	87,152,292,141,216,	0,970,3454,4237,6421,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	151181051	151224145	chr5:151181051-151224145	3	-	151183436	151223970	789624	9	2563,98,120,102,74,88,107,76,223,	0,3292,4370,4971,6334,17945,20530,24348,42871,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	151181051	151224093	chr5:151181051-151224093	0	-	151181051	151181051	8553170	8	2563,98,120,102,74,88,107,171,	0,3292,4370,4971,6334,17945,20530,42871,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	151181234	151185215	chr5:151181234-151185215	0	-	151181234	151181234	8553170	2	2380,872,	0,3109,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	151181392	151205477	chr5:151181392-151205477	0	-	151184425	151205477	789624	8	2222,98,95,102,74,88,107,78,	0,2951,4054,4630,5993,17604,20189,24007,
#Partially deleted in new
chr5	151185421	151205475	chr5:151185421-151205475	0	-	151186114	151205475	789624	5	120,102,74,107,76,	0,601,1964,16160,19978,
#Partially deleted in new
chr5	151198841	151205475	chr5:151198841-151205475	0	-	151198841	151198841	8553170	3	243,107,76,	0,2740,6558,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	151205399	151211145	chr5:151205399-151211145	0	-	151205399	151205399	8553170	2	76,490,	0,5256,
#Partially deleted in new
chr5	151212149	151266880	chr5:151212149-151266880	0	+	151212763	151266880	789624	4	110,131,162,150,	0,609,47605,54581,
#Partially deleted in new
chr5	151215565	151224092	chr5:151215565-151224092	0	-	151215590	151223970	789624	2	121,170,	0,8357,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	151252891	151270440	chr5:151252891-151270440	3	+	151253216	151267451	0	4	406,162,183,3145,	0,6863,13839,14404,
#Partially deleted in new
chr5	151259798	151267255	chr5:151259798-151267255	0	+	151259798	151266925	789624	2	118,525,	0,6932,
#Partially deleted in new
chr5	151276761	151303766	chr5:151276761-151303766	3	-	151277392	151303354	789624	10	900,170,167,99,219,85,96,89,91,540,	0,4252,7282,7851,10484,11624,16602,19418,21831,26465,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	151277147	151298264	chr5:151277147-151298264	0	-	151277147	151277147	8553170	9	514,170,167,99,219,85,123,96,2085,	0,3866,6896,7465,10098,11238,11786,16216,19032,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	151314977	151347590	chr5:151314977-151347590	3	-	151316816	151347460	789624	10	2111,170,167,99,219,85,96,89,91,294,	0,7068,10308,18246,20351,24082,27910,28532,29199,32319,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	151316192	151347528	chr5:151316192-151347528	0	-	151335543	151347460	789624	9	896,170,167,99,219,96,89,91,232,	0,5853,9093,17031,19136,26695,27317,27984,31104,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	151316192	151347528	chr5:151316192-151347528	0	-	151335543	151347460	789624	10	896,170,167,97,99,219,96,89,91,232,	0,5853,9093,16236,17031,19136,26695,27317,27984,31104,
#Partially deleted in new
chr5	151319421	151319776	chr5:151319421-151319776	7	+	151319421	151319421	16724991	1	355,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	151321884	151347590	chr5:151321884-151347590	1	-	151322037	151347460	789624	9	331,167,99,219,85,96,89,91,294,	0,3401,11339,13444,17175,21003,21625,22292,25412,
#Partially deleted in new
chr5	151325150	151333324	chr5:151325150-151333324	0	-	151325230	151333324	789624	2	302,101,	0,8073,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	151338612	151347556	chr5:151338612-151347556	0	-	151338612	151338612	8553170	5	532,96,89,91,260,	0,4275,4897,5564,8684,
#Partially deleted in new
chr5	151366298	151436953	chr5:151366298-151436953	7	-	151366298	151366298	16724991	4	360,218,90,748,	0,46233,59009,69907,
#Partially deleted in new
chr5	151366432	151431352	chr5:151366432-151431352	5	-	151366432	151366432	16724991	9	226,170,99,218,85,95,88,90,105,	0,20630,40029,46099,48254,53460,55704,58875,64815,
#Deleted in new
chr5	151378002	151378640	chr5:151378002-151378640	7	-	151378002	151378002	16724991	1	638,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	151380340	151382381	chr5:151380340-151382381	7	+	151380340	151380340	16724991	2	976,400,	0,1641,
#Partially deleted in new
chr5	151437045	151464578	chr5:151437045-151464578	0	+	151458792	151464578	789624	5	134,149,148,91,65,	0,15297,21742,26507,27468,
#Partially deleted in new
chr5	151437046	151488690	chr5:151437046-151488690	3	+	151458792	151488254	789624	11	133,148,91,89,96,85,219,99,167,170,708,	0,21741,26506,27467,28027,30152,30660,36626,39543,42273,50936,
#Partially deleted in new
chr5	151437085	151470959	chr5:151437085-151470959	1	+	151458792	151469254	789624	9	94,148,91,89,96,85,219,26,129,	0,21702,26467,27428,27988,30113,30621,32160,33745,
#Partially deleted in new
chr5	151447595	151492381	chr5:151447595-151492381	1	+	151458792	151488254	789624	11	218,148,91,89,96,85,219,99,167,170,4399,	0,11192,15957,16918,17478,19603,20111,26077,28994,31724,40387,
#Partially deleted in new
chr5	151447613	151480143	chr5:151447613-151480143	1	+	151458792	151480058	789624	12	93,45,148,91,89,96,85,219,99,167,170,87,	0,155,11174,15939,16900,17460,19585,20093,26059,28976,31706,32443,
#Partially deleted in new
chr5	151447626	151463620	chr5:151447626-151463620	0	+	151458792	151463620	789624	4	187,149,148,68,	0,4716,11161,15926,
#Partially deleted in new
chr5	151447626	151479759	chr5:151447626-151479759	1	+	151458792	151479497	789624	10	187,148,91,89,96,85,219,99,167,440,	0,11161,15926,16887,17447,19572,20080,26046,28963,31693,
#Partially deleted in new
chr5	151447800	151465149	chr5:151447800-151465149	0	+	151447800	151447800	8553170	6	79,148,91,91,89,76,	0,10987,11973,15752,16713,17273,
#Partially deleted in new
chr5	151450922	151463624	chr5:151450922-151463624	0	+	151458792	151463624	789624	4	119,149,148,72,	0,1420,7865,12630,
#Partially deleted in new
chr5	151473672	151480144	chr5:151473672-151480144	0	+	151473672	151480058	789624	4	99,167,170,88,	0,2917,5647,6384,
#Partially deleted in new
chr5	151476588	151488269	chr5:151476588-151488269	0	+	151476588	151476954	789624	4	168,126,170,287,	0,266,2731,11394,
#Deleted in new
chr5	151477458	151477577	chr5:151477458-151477577	7	-	151477458	151477458	16724991	1	119,	0,
#Partially deleted in new
chr5	151504092	151531972	chr5:151504092-151531972	0	-	151505564	151531972	789624	11	2005,458,154,184,146,811,198,144,138,215,386,	0,3061,5928,8072,13527,17183,21675,23141,23903,25085,27494,
#Partially deleted in new
chr5	151504093	151568944	chr5:151504093-151568944	3	-	151505564	151568931	789624	23	2004,458,154,442,146,811,198,144,138,215,384,234,154,197,4053,211,282,140,211,312,59,315,3272,	0,3060,5927,8071,13526,17182,21674,23140,23902,25084,27493,30315,33699,36473,38191,45201,46496,47373,49083,50268,52250,59231,61579,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	151509452	151512769	chr5:151509452-151512769	3	+	151509452	151509452	8553170	1	3317,	0,
#Deleted in new
chr5	151522086	151522148	chr5:151522086-151522148	3	-	151522086	151522086	5263520	1	62,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	151652274	151655449	chr5:151652274-151655449	3	+	151652274	151652274	8553170	2	151,1416,	0,1759,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	151661095	151687165	chr5:151661095-151687165	3	-	151663570	151676188	0	10	2504,149,149,134,121,122,88,63,70,301,	0,2991,5265,6371,8568,10477,12033,13516,15036,25769,
#Partially deleted in new
chr5	151662487	151667654	chr5:151662487-151667654	0	-	151662487	151662487	8553170	4	1112,149,149,188,	0,1599,3873,4979,
#Partially deleted in new
chr5	151666372	151686963	chr5:151666372-151686963	0	-	151666372	151671629	789624	5	137,134,121,122,62,	0,1094,3291,5200,20529,
#Partially deleted in new
chr5	151666424	151667584	chr5:151666424-151667584	0	-	151666424	151666424	8553170	2	100,118,	0,1042,
#Partially deleted in new
chr5	151666476	151686968	chr5:151666476-151686968	0	-	151666476	151671629	789624	6	33,134,121,122,88,104,	0,990,3187,5096,6652,20388,
#Partially deleted in new
chr5	151667473	151671829	chr5:151667473-151671829	0	-	151667473	151667473	8553170	3	127,121,257,	0,2190,4099,
#Partially deleted in new
chr5	151671569	151685230	chr5:151671569-151685230	0	-	151671569	151676188	789624	5	125,88,63,70,165,	0,1559,3042,4562,13496,
#Partially deleted in new
chr5	151672596	151686975	chr5:151672596-151686975	0	-	151672596	151672596	8553170	4	620,63,70,111,	0,2015,3535,14268,
#Partially deleted in new
chr5	151673177	151686963	chr5:151673177-151686963	0	-	151673177	151676188	789624	5	39,63,70,226,99,	0,1434,2954,5896,13687,
#Partially deleted in new
chr5	151676944	151687910	chr5:151676944-151687910	3	+	151676944	151676944	789624	5	103,117,101,123,1529,	0,2275,2711,8884,9437,
#Partially deleted in new
chr5	151676972	151724782	chr5:151676972-151724782	0	+	151676972	151676972	8553170	3	75,117,218,	0,2247,47592,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	151704288	151704578	chr5:151704288-151704578	3	-	151704288	151704288	8553170	1	290,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	151724830	151725356	chr5:151724830-151725356	3	-	151724830	151724830	8553170	1	526,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	151742315	151752426	chr5:151742315-151752426	1	-	151746324	151752316	789624	3	4134,76,131,	0,9388,9980,
#Partially deleted in new
chr5	151742821	151753895	chr5:151742821-151753895	1	-	151746324	151751758	789624	4	138,171,76,81,	0,3457,8882,10993,
#Partially deleted in new
chr5	151742821	151746563	chr5:151742821-151746563	0	-	151742821	151742821	8553170	2	138,285,	0,3457,
#Partially deleted in new
chr5	151742821	151752118	chr5:151742821-151752118	1	-	151746324	151751758	789624	3	138,171,415,	0,3457,8882,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	151742821	151772532	chr5:151742821-151772532	3	-	151746324	151758551	0	5	138,171,76,234,130,	0,3457,8882,15724,29581,
#Partially deleted in new
chr5	151742822	151758649	chr5:151742822-151758649	1	-	151746324	151758551	0	4	137,171,76,104,	0,3456,8881,15723,
#Partially deleted in new
chr5	151746045	151758656	chr5:151746045-151758656	1	-	151746324	151758551	0	3	404,76,111,	0,5658,12500,
#Partially deleted in new
chr5	151753991	151767247	chr5:151753991-151767247	3	+	151753991	151753991	8553170	3	131,232,207,	0,7298,13049,
#Deleted in new
chr5	151765858	151766378	chr5:151765858-151766378	7	-	151765858	151765858	16724991	1	520,	0,
#Deleted in new
chr5	151765896	151766239	chr5:151765896-151766239	5	-	151765896	151765896	16724991	1	343,	0,
#Deleted in new
chr5	151770241	151771508	chr5:151770241-151771508	3	-	151770241	151770241	789624	2	531,195,	0,1072,
#Partially deleted in new
chr5	151771044	151791029	chr5:151771044-151791029	0	+	151786620	151791029	789624	4	168,144,82,141,	0,15527,19278,19844,
#Partially deleted in new
chr5	151771083	151791063	chr5:151771083-151791063	0	+	151786620	151791063	789624	4	160,113,82,175,	0,15519,19239,19805,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	151771909	151812785	chr5:151771909-151812785	3	+	151786620	151804091	0	12	127,113,82,174,91,97,202,102,112,129,110,8901,	0,14693,18413,18979,22249,23569,25317,27302,27979,28308,28850,31975,
#Partially deleted in new
chr5	151771923	151804225	chr5:151771923-151804225	0	+	151786620	151792155	789624	12	113,144,82,174,157,97,202,102,112,129,110,341,	0,14648,18399,18965,20121,23555,25303,27288,27965,28294,28836,31961,
#Partially deleted in new
chr5	151771942	151805350	chr5:151771942-151805350	1	+	151786620	151804091	0	12	94,144,82,174,91,97,202,102,112,129,110,1466,	0,14629,18380,18946,22216,23536,25284,27269,27946,28275,28817,31942,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	151771951	151787386	chr5:151771951-151787386	0	+	151771951	151771951	8553170	2	85,784,	0,14651,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	151771951	151791750	chr5:151771951-151791750	0	+	151771951	151771951	8553170	4	85,144,82,862,	0,14620,18371,18937,
#Partially deleted in new
chr5	151771953	151794222	chr5:151771953-151794222	0	+	151786620	151794222	789624	6	83,144,30,82,174,64,	0,14618,15811,18369,18935,22205,
#Partially deleted in new
chr5	151771953	151795575	chr5:151771953-151795575	0	+	151786620	151790907	789624	5	83,113,174,91,97,	0,14649,18935,22205,23525,
#Partially deleted in new
chr5	151771953	151805349	chr5:151771953-151805349	0	+	151786620	151795496	0	11	83,144,82,174,97,202,102,112,129,110,1465,	0,14618,18369,18935,23525,25273,27258,27935,28264,28806,31931,
#Partially deleted in new
chr5	151771953	151795575	chr5:151771953-151795575	0	+	151786620	151795496	0	5	83,144,82,174,97,	0,14618,18369,18935,23525,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	151772278	151791026	chr5:151772278-151791026	0	+	151786620	151791026	789624	4	390,144,82,138,	0,14293,18044,18610,
#Partially deleted in new
chr5	151772503	151797369	chr5:151772503-151797369	0	+	151786620	151790907	789624	6	165,113,174,91,97,143,	0,14099,18385,21655,22975,24723,
#Partially deleted in new
chr5	151786620	151790907	chr5:151786620-151790907	1	+	151786620	151790907	789624	2	95,19,	0,4268,
#Partially deleted in new
chr5	151822512	151924842	chr5:151822512-151924842	3	-	151822672	151924549	0	9	451,147,215,138,83,224,68,128,349,	0,6408,28877,32527,33788,37272,64208,69798,101981,
#Partially deleted in new
chr5	151822626	151924836	chr5:151822626-151924836	1	-	151822672	151924549	0	9	361,147,215,138,83,224,68,128,343,	0,6294,28763,32413,33674,37158,64094,69684,101867,
#Partially deleted in new
chr5	151822626	151924836	chr5:151822626-151924836	0	-	151886730	151924549	789624	8	337,147,215,138,83,224,68,343,	0,6294,28763,32413,33674,37158,64094,101867,
#Partially deleted in new
chr5	151848885	151850791	chr5:151848885-151850791	7	+	151848885	151848885	16724991	2	180,935,	0,971,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	151849690	151924832	chr5:151849690-151924832	0	-	151849690	151849690	8553170	8	607,215,138,83,224,68,128,339,	0,1699,5349,6610,10094,37030,42620,74803,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	151875565	151875692	chr5:151875565-151875692	7	-	151875565	151875565	16724991	1	127,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	151949570	152270448	chr5:151949570-152270448	3	+	151949570	151949570	8553170	7	93,63,43,81,90,37,3184,	0,1403,2067,245153,245870,281692,317694,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	151958897	152270445	chr5:151958897-152270445	0	+	151958897	151958897	789624	3	57,91,251,	0,308367,311297,
#Partially deleted in new
chr5	152195447	152270445	chr5:152195447-152270445	0	+	152195447	152195447	8553170	3	83,91,251,	0,71817,74747,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	152391531	152405279	chr5:152391531-152405279	3	-	152392190	152405113	789624	4	970,126,85,892,	0,3927,6528,12856,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	152395497	152433368	chr5:152395497-152433368	0	-	152395497	152395497	8553170	4	87,85,81,191,	0,2562,32859,37680,
#Partially deleted in new
chr5	152495717	152496017	chr5:152495717-152496017	7	-	152495717	152495717	16724991	1	300,	0,
#Partially deleted in new
chr5	152620504	153223543	chr5:152620504-153223543	0	-	152620504	152620504	8553170	4	278,125,102,91,	0,64156,448207,602948,
#Partially deleted in new
chr5	152885426	152971783	chr5:152885426-152971783	0	-	152885426	152885426	8553170	3	202,94,70,	0,80814,86287,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	152938837	152973203	chr5:152938837-152973203	1	-	152938837	152938837	8553170	6	154,94,14,73,220,126,	0,27403,28255,32876,33176,34240,
#Partially deleted in new
chr5	153489614	153706172	chr5:153489614-153706172	0	+	153489614	153489614	8553170	11	223,138,240,185,54,162,168,105,111,207,476,	0,4313,157313,160715,166204,184885,187379,196610,208429,209252,216082,
#Deleted in new
chr5	153490267	153494065	chr5:153490267-153494065	0	+	153490267	153490267	8553170	3	182,42,138,	0,661,3660,
#Partially deleted in new
chr5	153490481	153650507	chr5:153490481-153650507	0	+	153490481	153490481	8553170	4	30,138,240,178,	0,3446,156446,159848,
#Partially deleted in new
chr5	153490545	153813869	chr5:153490545-153813869	3	+	153490888	153811225	789624	16	425,138,240,185,54,162,168,105,111,207,371,199,248,115,135,2845,	0,3382,156382,159784,165273,183954,186448,195679,207498,208321,215151,273888,279622,304075,311810,320479,
#Deleted in new
chr5	153490643	153494334	chr5:153490643-153494334	0	+	153490643	153490643	8553170	2	327,407,	0,3284,
#Partially deleted in new
chr5	153490654	153811271	chr5:153490654-153811271	1	+	153490888	153811225	789624	15	316,138,185,54,162,168,105,111,207,371,199,248,115,135,247,	0,3273,159675,165164,183845,186339,195570,207389,208212,215042,273779,279513,303966,311701,320370,
#Partially deleted in new
chr5	153490815	153811601	chr5:153490815-153811601	1	+	153490888	153811225	789624	16	155,138,240,185,54,162,168,105,111,207,371,199,248,115,135,577,	0,3112,156112,159514,165003,183684,186178,195409,207228,208051,214881,273618,279352,304660,311540,320209,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	153491196	153558095	chr5:153491196-153558095	0	+	153491196	153491196	8553170	3	136,138,298,	0,2731,66601,
#Partially deleted in new
chr5	153491296	153811619	chr5:153491296-153811619	1	+	153494052	153811225	789624	16	36,138,240,185,54,162,168,105,111,207,371,199,248,115,135,595,	0,2631,155631,159033,164522,183203,185697,194928,206747,207570,214400,273137,278871,303324,311059,319728,
#Partially deleted in new
chr5	153492171	153811272	chr5:153492171-153811272	1	+	153492198	153811225	789624	16	139,138,240,185,54,162,168,105,111,207,371,199,248,115,135,248,	0,1756,154756,158158,163647,182328,184822,194053,205872,206695,213525,272262,277996,303304,310184,318853,
#Partially deleted in new
chr5	153492171	153813680	chr5:153492171-153813680	1	+	153492198	153811225	789624	16	139,138,240,185,54,162,168,105,111,207,371,199,248,115,135,2656,	0,1756,154756,158158,163647,182328,184822,194053,205872,206695,213525,272262,277996,302449,310184,318853,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	153493989	153525522	chr5:153493989-153525522	0	+	153493989	153493989	8553170	2	76,343,	0,31190,
#Partially deleted in new
chr5	153573227	153655865	chr5:153573227-153655865	0	+	153573227	153573227	8553170	5	45,43,240,185,47,	0,1121,73700,77102,82591,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	153755381	153755680	chr5:153755381-153755680	3	+	153755381	153755381	8553170	1	299,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	153887427	153898987	chr5:153887427-153898987	3	-	153887427	153887427	789624	4	36,245,174,82,	0,8113,10759,11478,
#Deleted in new
chr5	153901458	153903223	chr5:153901458-153903223	3	+	153901458	153901458	8553170	1	1765,	0,
#Partially deleted in new
chr5	153990127	154038919	chr5:153990127-154038919	3	-	153992975	154034953	789624	14	2983,54,73,140,123,80,124,159,135,92,93,100,224,63,	0,4791,7675,12123,12719,21113,36271,37048,38021,39361,43663,44150,44616,48729,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr5	153991702	154038866	chr5:153991702-154038866	1	-	153992975	154034953	789624	14	1408,54,73,140,123,80,124,159,135,92,93,100,224,574,	0,3216,6100,10548,11144,19538,34696,35473,36446,37786,42088,42575,43041,46590,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr5	153992498	154038921	chr5:153992498-154038921	1	-	153992975	154034953	789624	15	612,54,73,140,123,80,124,159,135,92,93,100,224,47,65,	0,2420,5304,9752,10348,18742,33900,34677,35650,36990,41292,41779,42245,45889,46358,
#Partially deleted in new
chr5	153992687	153997826	chr5:153992687-153997826	0	-	153992687	153992687	8553170	4	423,152,54,24,	0,1904,2231,5115,
#Deleted in new
chr5	153992713	153995307	chr5:153992713-153995307	0	-	153992713	153992713	8553170	2	397,389,	0,2205,
#Partially deleted in new
chr5	153992954	154038907	chr5:153992954-154038907	1	-	153992975	154034953	789624	13	156,54,73,140,123,80,124,159,135,92,87,120,51,	0,1964,4848,9296,9892,18286,33444,34221,35194,36534,40836,41893,45902,
#Deleted in new
chr5	154026311	154027381	chr5:154026311-154027381	0	-	154026311	154026311	8553170	2	211,206,	0,864,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	154027294	154038921	chr5:154027294-154038921	0	-	154027294	154027294	8553170	4	252,71,142,65,	0,7581,10998,11562,
#Partially deleted in new
chr5	154028148	154038936	chr5:154028148-154038936	0	-	154028148	154034953	789624	6	135,92,93,100,224,110,	0,1340,5642,6129,6595,10678,
#Partially deleted in new
chr5	154028242	154038910	chr5:154028242-154038910	0	-	154028242	154028242	8553170	6	41,92,93,100,203,54,	0,1246,5548,6035,6501,10614,
#Partially deleted in new
chr5	154028279	154038898	chr5:154028279-154038898	0	-	154028279	154034953	789624	6	4,92,93,100,224,63,	0,1209,5511,5998,6464,10556,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	154033816	154038932	chr5:154033816-154038932	0	-	154033816	154034953	789624	5	67,100,224,142,76,	0,461,927,4476,5040,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	154034277	154038910	chr5:154034277-154038910	0	-	154034277	154034953	789624	4	100,224,142,84,	0,466,4015,4549,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	154034349	154038880	chr5:154034349-154038880	0	-	154034349	154034953	789624	5	28,224,144,142,24,	0,394,1892,3943,4507,
#Partially deleted in new
chr5	154034762	154037310	chr5:154034762-154037310	0	-	154034762	154034953	789624	2	205,589,	0,1959,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	154034762	154038747	chr5:154034762-154038747	0	-	154034762	154034762	8553170	2	184,360,	0,3625,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	154034907	154038898	chr5:154034907-154038898	0	-	154034907	154034953	789624	2	60,511,	0,3480,
#Partially deleted in new
chr5	154038905	154052995	chr5:154038905-154052995	0	+	154049722	154052995	789624	3	106,461,76,	0,10651,14014,
#Partially deleted in new
chr5	154038958	154054052	chr5:154038958-154054052	1	+	154053062	154053713	789624	2	53,1133,	0,13961,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	154038967	154161535	chr5:154038967-154161535	0	+	154038967	154038967	8553170	4	44,248,81,1060,	0,58056,110898,121508,
#Partially deleted in new
chr5	154038973	154135481	chr5:154038973-154135481	0	+	154038973	154038973	8553170	4	38,248,72,358,	0,58050,95871,96150,
#Partially deleted in new
chr5	154038992	154055033	chr5:154038992-154055033	3	+	154049722	154053713	789624	3	316,461,2114,	0,10564,13927,
#Partially deleted in new
chr5	154038993	154052952	chr5:154038993-154052952	0	+	154049722	154052952	789624	3	73,461,33,	0,10563,13926,
#Partially deleted in new
chr5	154038998	154049772	chr5:154038998-154049772	0	+	154049722	154049772	789624	2	304,216,	0,10558,
#Deleted in new
chr5	154049601	154053002	chr5:154049601-154053002	0	+	154049601	154049601	8553170	3	416,207,83,	0,2135,3318,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	154097022	154159815	chr5:154097022-154159815	0	+	154097022	154097022	8553170	4	249,180,81,1943,	0,24695,52843,60850,
#Partially deleted in new
chr5	154097022	154220478	chr5:154097022-154220478	0	+	154097022	154097022	8553170	5	249,72,81,121,421,	0,37822,52843,121006,123035,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	154097022	154149947	chr5:154097022-154149947	0	+	154097022	154097022	8553170	4	249,180,72,82,	0,24695,37822,52843,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	154097022	154122021	chr5:154097022-154122021	0	+	154097022	154097022	8553170	2	249,304,	0,24695,
#Partially deleted in new
chr5	154190729	154420984	chr5:154190729-154420984	3	+	154190866	154416972	0	12	296,103,139,167,186,184,118,108,222,117,150,4171,	0,104086,107211,138842,185547,189718,195583,213374,218811,222159,225053,226084,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	154190729	154389581	chr5:154190729-154389581	1	+	154190866	154386475	0	7	296,103,139,167,186,184,3269,	0,104086,107211,138842,185547,189718,195583,
#Partially deleted in new
chr5	154190734	154419012	chr5:154190734-154419012	0	+	154190866	154356193	789624	14	291,103,139,167,131,186,184,118,108,222,244,117,150,2199,	0,104081,107206,138837,165418,185542,189713,195578,213369,218806,221757,222154,225048,226079,
#Partially deleted in new
chr5	154190747	154219674	chr5:154190747-154219674	0	+	154190747	154190747	8553170	3	278,121,201,	0,27281,28726,
#Partially deleted in new
chr5	154190773	154419031	chr5:154190773-154419031	1	+	154190866	154416972	0	11	252,103,139,167,184,118,108,222,117,150,2218,	0,104042,107167,138798,189674,195539,213330,218767,222115,225009,226040,
#Partially deleted in new
chr5	154190996	154376420	chr5:154190996-154376420	0	+	154190996	154190996	8553170	6	29,121,103,139,167,144,	0,27032,103819,106944,138575,185280,
#Partially deleted in new
chr5	154287469	154376367	chr5:154287469-154376367	0	+	154287469	154287469	8553170	5	45,103,139,167,91,	0,7346,10471,42102,88807,
#Deleted in new
chr5	154337470	154338452	chr5:154337470-154338452	7	-	154337470	154337470	16724991	1	982,	0,
#Deleted in new
chr5	154347105	154347247	chr5:154347105-154347247	3	+	154347105	154347105	5263520	1	142,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	154349427	154349725	chr5:154349427-154349725	3	+	154349427	154349427	8553170	1	298,	0,
#Partially deleted in new
chr5	154376316	154406256	chr5:154376316-154406256	0	+	154376316	154376316	8553170	5	146,184,118,108,188,	0,4131,9996,27787,29752,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	154402789	154409639	chr5:154402789-154409639	0	+	154402789	154402789	8553170	3	122,108,99,	0,1314,6751,
#Partially deleted in new
chr5	154403776	154419033	chr5:154403776-154419033	0	+	154403776	154403776	8553170	5	440,222,117,150,2220,	0,5764,9112,12006,13037,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	154442996	154445822	chr5:154442996-154445822	1	-	154442996	154442996	8553170	2	484,85,	0,2741,
#Partially deleted in new
chr5	154445956	154461054	chr5:154445956-154461054	3	+	154446604	154456028	0	4	849,123,99,5155,	0,5134,7445,9943,
#Partially deleted in new
chr5	154446544	154456331	chr5:154446544-154456331	1	+	154446604	154456028	0	3	261,84,432,	0,6872,9355,
#Partially deleted in new
chr5	154446544	154456331	chr5:154446544-154456331	1	+	154446604	154456028	0	3	261,99,432,	0,6857,9355,
#Partially deleted in new
chr5	154446544	154455968	chr5:154446544-154455968	0	+	154446544	154446544	8553170	5	261,123,40,99,69,	0,4546,5911,6857,9355,
#Partially deleted in new
chr5	154446553	154453485	chr5:154446553-154453485	0	+	154446553	154446553	8553170	4	252,123,44,84,	0,4537,5902,6848,
#Partially deleted in new
chr5	154446621	154451316	chr5:154446621-154451316	0	+	154446621	154446621	8553170	2	184,226,	0,4469,
#Partially deleted in new
chr5	154452397	154456149	chr5:154452397-154456149	0	+	154452397	154452397	8553170	3	102,99,250,	0,1004,3502,
#Partially deleted in new
chr5	154452442	154456149	chr5:154452442-154456149	0	+	154452442	154452442	8553170	3	53,99,250,	0,959,3457,
#Partially deleted in new
chr5	154453077	154456268	chr5:154453077-154456268	0	+	154453077	154453077	8553170	2	423,369,	0,2822,
#Deleted in new
chr5	154474971	154478264	chr5:154474971-154478264	3	-	154475805	154478008	789624	2	939,799,	0,2494,
#Deleted in new
chr5	154483916	154485929	chr5:154483916-154485929	3	-	154483916	154483916	8553170	2	1627,107,	0,1906,
#Deleted in new
chr5	154485272	154486150	chr5:154485272-154486150	0	-	154485272	154485272	8553170	2	271,131,	0,747,
#Deleted in new
chr5	154493575	154494743	chr5:154493575-154494743	7	+	154493575	154493575	16724991	1	1168,	0,
#Deleted in new
chr5	154559307	154560440	chr5:154559307-154560440	7	-	154559307	154559307	16724991	1	1133,	0,
#Deleted in new
chr5	154596011	154596072	chr5:154596011-154596072	3	-	154596011	154596011	5263520	1	61,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	154685775	154685861	chr5:154685775-154685861	3	+	154685775	154685775	5263520	1	86,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	154705625	154705727	chr5:154705625-154705727	3	+	154705625	154705625	8553170	1	102,	0,
#Partially deleted in new
chr5	154712901	154817607	chr5:154712901-154817607	3	+	154712925	154814096	789624	19	229,62,66,175,129,201,163,145,169,170,393,124,206,107,152,145,110,128,3721,	0,77423,77743,79720,80693,80898,81198,82273,86689,86971,89105,90388,90638,91299,92979,95557,98345,98611,100985,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	154718382	154718689	chr5:154718382-154718689	3	-	154718382	154718382	8553170	1	307,	0,
#Partially deleted in new
chr5	154729230	154729694	chr5:154729230-154729694	7	+	154729230	154729230	16724991	1	464,	0,
#Partially deleted in new
chr5	154755574	154804208	chr5:154755574-154804208	0	+	154755757	154804208	789624	14	619,62,66,175,129,201,163,145,169,170,393,124,206,8,	0,34750,35070,37047,38020,38225,38525,39600,44016,44298,46432,47715,47965,48626,
#Partially deleted in new
chr5	154755984	154793649	chr5:154755984-154793649	0	+	154755984	154793649	789624	4	209,62,175,55,	0,34340,36637,37610,
#Partially deleted in new
chr5	154756002	154786684	chr5:154756002-154786684	0	+	154756002	154786487	789624	2	191,208,	0,30474,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	154756173	154794195	chr5:154756173-154794195	0	+	154756173	154791981	789624	8	20,62,66,68,175,129,201,96,	0,34151,34471,35772,36448,37421,37626,37926,
#Partially deleted in new
chr5	154756410	154793824	chr5:154756410-154793824	0	+	154792672	154793824	789624	6	112,62,66,175,129,25,	0,33914,34234,36211,37184,37389,
#Partially deleted in new
chr5	154757173	154804208	chr5:154757173-154804208	0	+	154792672	154804208	789624	14	117,62,66,175,129,201,163,145,169,170,393,124,206,8,	0,33151,33471,35448,36421,36626,36926,38001,42417,42699,44833,46116,46366,47027,
#Partially deleted in new
chr5	154792732	154802009	chr5:154792732-154802009	0	+	154792732	154802009	789624	7	64,129,163,145,169,170,3,	0,862,1367,2442,6858,7140,9274,
#Deleted in new
chr5	154792773	154795186	chr5:154792773-154795186	0	+	154792773	154795186	789624	5	23,129,123,163,12,	0,821,1026,1326,2401,
#Partially deleted in new
chr5	154794045	154802078	chr5:154794045-154802078	0	+	154794045	154794045	8553170	5	217,145,169,170,72,	0,1129,5545,5827,7961,
#Partially deleted in new
chr5	154794209	154802083	chr5:154794209-154802083	0	+	154794209	154802083	789624	5	53,145,169,143,77,	0,965,5381,5690,7797,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	154802349	154805113	chr5:154802349-154805113	0	+	154802349	154804837	789624	5	50,124,206,107,340,	0,940,1190,1851,2424,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	154804220	154805240	chr5:154804220-154805240	0	+	154804220	154804882	789624	2	87,380,	0,640,
#Partially deleted in new
chr5	154805753	154811351	chr5:154805753-154811351	0	+	154805753	154805753	8553170	3	279,145,105,	0,2705,5493,
#Partially deleted in new
chr5	154811387	154813920	chr5:154811387-154813920	0	+	154811387	154811387	8553170	2	253,34,	0,2499,
#Partially deleted in new
chr5	154818490	154850906	chr5:154818490-154850906	3	-	154820315	154838178	789624	9	1982,167,106,206,122,104,92,48,424,	0,2769,3981,4896,12310,16134,16352,19640,31992,
#Partially deleted in new
chr5	154818493	154850609	chr5:154818493-154850609	0	-	154818493	154818493	8553170	8	2933,106,285,122,104,92,48,127,	0,3978,4814,12307,16131,16349,19637,31989,
#Partially deleted in new
chr5	154819749	154824708	chr5:154819749-154824708	0	-	154819749	154819749	8553170	3	1677,106,1322,	0,2722,3637,
#Partially deleted in new
chr5	154820193	154850609	chr5:154820193-154850609	1	-	154820315	154834913	789624	8	279,167,106,206,122,104,92,127,	0,1066,2278,3193,10607,14431,14649,30289,
#Partially deleted in new
chr5	154820368	154850597	chr5:154820368-154850597	0	-	154823579	154838178	789624	7	104,167,106,206,122,48,115,	0,891,2103,3018,10432,17762,30114,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	154821942	154822258	chr5:154821942-154822258	3	+	154821942	154821942	8553170	1	316,	0,
#Partially deleted in new
chr5	154822469	154850603	chr5:154822469-154850603	0	-	154823579	154838178	789624	5	108,206,92,48,121,	0,917,12373,15661,28013,
#Partially deleted in new
chr5	154822494	154834954	chr5:154822494-154834954	0	-	154823467	154834913	789624	4	83,285,104,112,	0,813,12130,12348,
#Partially deleted in new
chr5	154822526	154835088	chr5:154822526-154835088	0	-	154830861	154834913	789624	4	51,206,122,246,	0,860,8274,12316,
#Partially deleted in new
chr5	154823449	154850603	chr5:154823449-154850603	0	-	154823449	154834913	789624	6	143,122,104,277,48,121,	0,7351,11175,11393,14681,27033,
#Partially deleted in new
chr5	154823503	154831298	chr5:154823503-154831298	0	-	154823503	154823503	8553170	2	89,498,	0,7297,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	154823560	154836322	chr5:154823560-154836322	0	-	154823560	154823560	8553170	5	32,122,104,92,180,	0,7240,11064,11282,12582,
#Partially deleted in new
chr5	154824460	154850603	chr5:154824460-154850603	1	-	154824509	154834913	789624	5	97,122,104,92,121,	0,6340,10164,10382,26022,
#Partially deleted in new
chr5	154824483	154859252	chr5:154824483-154859252	1	-	154824492	154838178	789624	6	74,104,92,48,163,77,	0,10141,10359,13647,34132,34692,
#Deleted in new
chr5	154829457	154829540	chr5:154829457-154829540	3	+	154829457	154829457	5263520	1	83,	0,
#Partially deleted in new
chr5	154830326	154850590	chr5:154830326-154850590	0	-	154830326	154830326	8553170	5	596,104,92,48,108,	0,4298,4516,7804,20156,
#Partially deleted in new
chr5	154830889	154835274	chr5:154830889-154835274	0	-	154830889	154830889	8553170	3	33,104,432,	0,3735,3953,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	154834887	154850613	chr5:154834887-154850613	0	-	154834887	154838178	789624	4	47,48,377,131,	0,3243,3675,15595,
#Partially deleted in new
chr5	154857552	154863220	chr5:154857552-154863220	0	+	154857552	154857552	8553170	3	341,130,14,	0,1086,5654,
#Deleted in new
chr5	154858218	154859870	chr5:154858218-154859870	0	+	154858218	154858218	8553170	3	307,92,176,	0,1186,1476,
#Deleted in new
chr5	154858240	154859439	chr5:154858240-154859439	0	+	154858240	154858240	8553170	3	285,178,87,	0,398,1112,
#Partially deleted in new
chr5	154858248	154875456	chr5:154858248-154875456	1	+	154870667	154875439	789624	5	277,162,145,111,167,	0,12412,13481,14292,17041,
#Partially deleted in new
chr5	154858251	154876792	chr5:154858251-154876792	3	+	154863278	154875439	789624	8	274,130,189,194,162,145,111,1503,	0,387,4955,6940,12409,13478,14289,17038,
#Partially deleted in new
chr5	154858261	154870747	chr5:154858261-154870747	0	+	154863278	154870747	789624	5	264,178,189,194,87,	0,377,4945,6930,12399,
#Partially deleted in new
chr5	154858481	154870705	chr5:154858481-154870705	0	+	154863278	154870705	789624	5	62,130,189,194,45,	0,157,4725,6710,12179,
#Partially deleted in new
chr5	154858514	154871781	chr5:154858514-154871781	0	+	154863278	154871781	789624	5	29,159,189,194,52,	0,124,4692,6677,13215,
#Partially deleted in new
chr5	154858516	154876792	chr5:154858516-154876792	1	+	154863278	154875439	789624	7	300,189,194,162,145,111,1503,	0,4690,6675,12144,13213,14024,16773,
#Partially deleted in new
chr5	154858516	154871831	chr5:154858516-154871831	0	+	154870667	154871831	789624	5	27,163,194,162,102,	0,122,6675,12144,13213,
#Partially deleted in new
chr5	154858516	154875872	chr5:154858516-154875872	1	+	154870667	154875439	789624	6	27,130,162,145,111,583,	0,122,12144,13213,14024,16773,
#Partially deleted in new
chr5	154858536	154870704	chr5:154858536-154870704	0	+	154863278	154870704	789624	4	265,189,194,44,	0,4670,6655,12124,
#Partially deleted in new
chr5	154858538	154875513	chr5:154858538-154875513	1	+	154871748	154875439	789624	5	230,194,145,111,224,	0,6653,13191,14002,16751,
#Partially deleted in new
chr5	154858545	154876793	chr5:154858545-154876793	1	+	154863278	154875439	789624	7	223,189,194,162,145,111,1504,	0,4661,6646,12115,13184,13995,16744,
#Partially deleted in new
chr5	154858624	154865241	chr5:154858624-154865241	0	+	154863278	154865241	789624	4	144,179,189,50,	0,1070,4582,6567,
#Partially deleted in new
chr5	154858626	154875458	chr5:154858626-154875458	1	+	154870667	154875439	789624	6	142,194,162,145,111,169,	0,6565,12034,13103,13914,16663,
#Partially deleted in new
chr5	154858626	154875585	chr5:154858626-154875585	1	+	154870667	154875439	789624	7	142,194,101,162,145,111,296,	0,6565,9065,12034,13103,13914,16663,
#Partially deleted in new
chr5	154858634	154865240	chr5:154858634-154865240	0	+	154863278	154865240	789624	4	134,144,189,49,	0,718,4572,6557,
#Partially deleted in new
chr5	154858651	154875478	chr5:154858651-154875478	1	+	154863278	154875439	789624	6	117,189,194,145,111,189,	0,4555,6540,13078,13889,16638,
#Partially deleted in new
chr5	154858653	154865344	chr5:154858653-154865344	0	+	154863278	154865344	789624	3	163,184,153,	0,4558,6538,
#Partially deleted in new
chr5	154858653	154875587	chr5:154858653-154875587	0	+	154863278	154870702	789624	6	163,189,162,145,111,298,	0,4553,12007,13076,13887,16636,
#Partially deleted in new
chr5	154858661	154875398	chr5:154858661-154875398	0	+	154863278	154875398	789624	6	172,189,194,145,111,109,	0,4545,6530,13068,13879,16628,
#Partially deleted in new
chr5	154858688	154872648	chr5:154858688-154872648	0	+	154863278	154867734	789624	7	128,189,194,101,162,145,108,	0,4518,6503,9003,11972,13041,13852,
#Partially deleted in new
chr5	154859666	154867733	chr5:154859666-154867733	0	+	154859666	154859666	8553170	4	171,189,194,42,	0,3540,5525,8025,
#Partially deleted in new
chr5	154870443	154872582	chr5:154870443-154872582	0	+	154870443	154870443	8553170	3	379,145,42,	0,1286,2097,
#Partially deleted in new
chr5	154887415	154938209	chr5:154887415-154938209	3	-	154888209	154938133	0	28	962,97,502,163,252,211,120,148,138,96,123,114,228,172,140,182,74,137,83,86,213,166,133,120,152,182,161,242,	0,1905,3825,4971,8676,11024,11775,13923,15123,15664,17091,17947,20175,24311,25483,29582,30515,32551,33927,37053,38446,39969,41111,44042,44683,48425,49609,50552,
#Deleted in new
chr5	154891433	154892650	chr5:154891433-154892650	0	-	154891433	154891433	8553170	2	309,264,	0,953,
#Partially deleted in new
chr5	154927385	154931716	chr5:154927385-154931716	0	-	154927385	154927385	8553170	3	165,133,259,	0,1141,4072,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	154941069	154969411	chr5:154941069-154969411	3	+	154941110	154966897	0	7	69,49,118,66,78,70,2726,	0,147,9751,15301,16065,18910,25616,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	154941092	154969411	chr5:154941092-154969411	1	+	154956415	154966897	0	6	46,49,66,78,70,2726,	0,124,15278,16042,18887,25593,
#Partially deleted in new
chr5	154941094	154966966	chr5:154941094-154966966	1	+	154941110	154966897	789624	6	171,118,66,78,70,281,	0,9726,15276,16040,18885,25591,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	154941101	154969411	chr5:154941101-154969411	1	+	154941110	154966897	0	7	37,49,136,66,78,70,2726,	0,115,9701,15269,16033,18878,25584,
#Partially deleted in new
chr5	154941176	154966893	chr5:154941176-154966893	0	+	154941176	154956398	789624	5	89,66,78,70,208,	0,15194,15958,18803,25509,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	154955198	154966945	chr5:154955198-154966945	0	+	154955198	154955198	8553170	3	2014,70,260,	0,4781,11487,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	154959050	154966971	chr5:154959050-154966971	0	+	154959050	154959050	8553170	3	125,70,286,	0,929,7635,
#Partially deleted in new
chr5	154993597	154994445	chr5:154993597-154994445	7	+	154993597	154993597	16724991	2	86,253,	0,595,
#Deleted in new
chr5	155013754	155018132	chr5:155013754-155018132	3	+	155013859	155017564	789624	1	4378,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	155111183	155112324	chr5:155111183-155112324	7	-	155111183	155111183	16724991	2	481,370,	0,771,
#Partially deleted in new
chr5	155397290	155398353	chr5:155397290-155398353	7	+	155397290	155397290	16724991	2	245,404,	0,659,
#Deleted in new
chr5	155491335	155493598	chr5:155491335-155493598	7	+	155491335	155491335	16724991	1	2263,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	155845436	155845528	chr5:155845436-155845528	7	+	155845436	155845436	16724991	1	92,	0,
#Partially deleted in new
chr5	155870343	156758055	chr5:155870343-156758055	1	+	156329576	156757776	789624	10	81,74,164,46,189,102,88,120,73,475,	0,247534,253512,459190,474145,638257,718887,724588,777120,887237,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	156326745	156767788	chr5:156326745-156767788	1	+	156344488	156759390	789624	8	487,189,102,88,120,73,124,8572,	0,17743,181855,262485,268186,320718,430835,432471,
#Partially deleted in new
chr5	156326756	156759604	chr5:156326756-156759604	3	+	156329576	156759390	789624	9	476,46,189,102,88,120,73,124,388,	0,2777,17732,181844,262474,268175,320707,430824,432460,
#Partially deleted in new
chr5	156326947	156589234	chr5:156326947-156589234	0	+	156329576	156393809	789624	6	285,46,189,113,102,4,	0,2586,17541,66805,181653,262283,
#Deleted in new
chr5	156458397	156458507	chr5:156458397-156458507	7	-	156458397	156458397	16724991	1	110,	0,
#Partially deleted in new
chr5	156704057	156739812	chr5:156704057-156739812	3	-	156704057	156704057	8553170	3	218,83,159,	0,34522,35596,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	156814129	156814234	chr5:156814129-156814234	3	+	156814129	156814129	8553170	1	105,	0,
#Partially deleted in new
chr5	156850537	156852528	chr5:156850537-156852528	3	+	156850562	156851180	789624	1	1991,	0,
#Partially deleted in new
chr5	156919281	156963255	chr5:156919281-156963255	3	-	156919456	156963198	0	9	260,40,118,50,84,81,279,342,115,	0,1182,2817,6981,29134,30369,32230,35133,43859,
#Partially deleted in new
chr5	156919354	156935676	chr5:156919354-156935676	1	-	156919456	156922216	789624	5	187,40,118,50,186,	0,1109,2744,6908,16136,
#Partially deleted in new
chr5	156919388	156963222	chr5:156919388-156963222	1	-	156919456	156963198	0	8	153,40,118,50,81,279,342,82,	0,1075,2710,6874,30262,32123,35026,43752,
#Deleted in new
chr5	156924118	156924710	chr5:156924118-156924710	7	+	156924118	156924118	16724991	1	592,	0,
#Partially deleted in new
chr5	157029412	157059119	chr5:157029412-157059119	1	-	157029587	157057943	789624	8	429,115,56,108,294,333,179,199,	0,7834,13214,19625,22948,25788,28485,29508,
#Partially deleted in new
chr5	157029425	157058955	chr5:157029425-157058955	3	-	157029732	157057943	789624	9	416,34,115,56,108,294,333,58,35,	0,3428,7821,13201,19612,22935,25775,28472,29495,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	157029515	157058476	chr5:157029515-157058476	1	-	157029732	157057943	789624	8	326,34,115,56,108,294,333,579,	0,3338,7731,13111,19522,22845,25685,28382,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	157029519	157058476	chr5:157029519-157058476	1	-	157029587	157057943	789624	7	322,115,56,108,294,333,579,	0,7727,13107,19518,22841,25681,28378,
#Partially deleted in new
chr5	157029739	157049149	chr5:157029739-157049149	0	-	157029739	157029739	8553170	5	102,17,115,56,112,	0,3114,7507,12887,19298,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	157085831	157109714	chr5:157085831-157109714	3	-	157087101	157108983	0	7	1463,37,154,44,84,336,789,	0,3109,9474,13026,18834,20795,23094,
#Partially deleted in new
chr5	157087087	157109122	chr5:157087087-157109122	1	-	157087101	157108983	789624	6	207,37,154,44,336,197,	0,1853,8218,11770,19539,21838,
#Partially deleted in new
chr5	157095407	157142869	chr5:157095407-157142869	0	-	157095407	157106669	789624	5	52,44,84,336,50,	0,3450,9258,11219,47412,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	157095449	157107283	chr5:157095449-157107283	0	-	157095449	157095449	8553170	4	10,44,84,657,	0,3408,9216,11177,
#Partially deleted in new
chr5	157104787	157114900	chr5:157104787-157114900	3	+	157104787	157104787	8553170	2	147,128,	0,9985,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	157106119	157109092	chr5:157106119-157109092	0	-	157106119	157106119	8553170	2	843,167,	0,2806,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	157106653	157107302	chr5:157106653-157107302	0	-	157106653	157106653	8553170	2	309,257,	0,392,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	157137411	157143184	chr5:157137411-157143184	3	-	157138729	157139431	789624	2	2037,365,	0,5408,
#Partially deleted in new
chr5	157138441	157142775	chr5:157138441-157142775	1	-	157138729	157139431	789624	2	1007,375,	0,3959,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	157138845	157159019	chr5:157138845-157159019	0	-	157138845	157139431	789624	3	603,240,136,	0,3974,20038,
#Partially deleted in new
chr5	157142932	157222963	chr5:157142932-157222963	0	+	157214240	157222963	789624	7	54,59,105,82,129,41,101,	0,23155,65956,68354,71258,74934,79930,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	157161845	157166264	chr5:157161845-157166264	3	-	157162446	157166168	789624	2	1813,702,	0,3717,
#Partially deleted in new
chr5	157180825	157255191	chr5:157180825-157255191	3	+	157180977	157252678	0	17	290,105,82,129,41,152,66,55,83,134,75,172,217,65,119,158,2585,	0,28063,30461,33365,37041,42037,47470,51514,57283,59236,60820,62797,63436,64900,65055,68024,71781,
#Partially deleted in new
chr5	157180836	157195907	chr5:157180836-157195907	0	+	157180836	157180836	8553170	2	279,823,	0,14248,
#Partially deleted in new
chr5	157180839	157211511	chr5:157180839-157211511	0	+	157180839	157180839	8553170	3	276,105,225,	0,28049,30447,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr5	157180842	157255099	chr5:157180842-157255099	0	+	157180842	157180842	8553170	16	273,105,82,129,41,152,66,55,83,1659,172,217,65,119,158,2493,	0,28046,30444,33348,37024,42020,47453,51497,57266,59219,62780,63419,64883,65038,68007,71764,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	157180866	157214210	chr5:157180866-157214210	0	+	157180977	157213592	789624	5	249,105,82,131,20,	0,28022,30420,32700,33324,
#Partially deleted in new
chr5	157199241	157224380	chr5:157199241-157224380	3	-	157199241	157199241	8553170	2	534,35,	0,25104,
#Partially deleted in new
chr5	157222748	157240131	chr5:157222748-157240131	0	+	157222748	157222748	8553170	5	266,66,55,83,70,	0,5547,9591,15360,17313,
#Partially deleted in new
chr5	157240092	157244275	chr5:157240092-157244275	0	+	157240092	157240092	8553170	3	103,75,653,	0,1553,3530,
#Partially deleted in new
chr5	157241590	157255185	chr5:157241590-157255185	0	+	157241590	157241590	8553170	6	130,172,217,119,158,2579,	0,2032,2671,4290,7259,11016,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	157244890	157245976	chr5:157244890-157245976	0	+	157244890	157244890	8553170	2	900,96,	0,990,
#Partially deleted in new
chr5	157266078	157393233	chr5:157266078-157393233	1	+	157285361	157393000	789624	32	117,140,90,78,102,182,97,129,105,92,118,120,126,167,148,75,154,157,97,77,109,120,200,88,144,91,131,73,95,239,148,401,	0,19260,20940,28704,30594,34636,36715,38159,41682,43664,45585,48265,48890,53683,54576,56863,57842,59403,60092,61894,64663,67248,72978,74991,92926,94203,95389,116511,117186,123110,124442,126754,
#Partially deleted in new
chr5	157266080	157393224	chr5:157266080-157393224	3	+	157285361	157393000	789624	31	115,140,90,78,102,182,97,129,105,92,118,120,126,167,148,154,157,97,77,109,120,200,88,144,91,131,73,95,239,148,392,	0,19258,20938,28702,30592,34634,36713,38157,41680,43662,45583,48263,48888,53681,54574,57840,59401,60090,61892,64661,67246,72976,74989,92924,94201,95387,116509,117184,123108,124440,126752,
#Partially deleted in new
chr5	157266122	157393223	chr5:157266122-157393223	1	+	157285361	157393000	789624	28	73,140,90,78,102,105,92,118,120,126,167,148,154,157,97,77,109,120,200,88,144,91,131,73,95,239,148,391,	0,19216,20896,28660,30550,41638,43620,45541,48221,48846,53639,54532,57798,59359,60048,61850,64619,67204,72934,74947,92882,94159,95345,116467,117142,123066,124398,126710,
#Partially deleted in new
chr5	157266122	157393207	chr5:157266122-157393207	1	+	157285361	157393000	789624	26	73,140,90,105,92,118,120,126,167,148,154,157,97,77,109,120,200,88,144,91,131,73,95,239,148,375,	0,19216,20896,41638,43620,45541,48221,48846,53639,54532,57798,59359,60048,61850,64619,67204,72934,74947,92882,94159,95345,116467,117142,123066,124398,126710,
#Partially deleted in new
chr5	157266127	157395595	chr5:157266127-157395595	1	+	157285361	157393000	789624	30	68,140,90,102,182,97,129,105,92,118,120,126,167,148,154,157,97,77,109,120,200,88,144,91,131,73,95,239,148,2763,	0,19211,20891,30545,34587,36666,38110,41633,43615,45536,48216,48841,53634,54527,57793,59354,60043,61845,64614,67199,72929,74942,92877,94154,95340,116462,117137,123061,124393,126705,
#Partially deleted in new
chr5	157266127	157304274	chr5:157266127-157304274	0	+	157285361	157300748	789624	6	68,140,56,182,97,37,	0,19211,20891,34587,36666,38110,
#Partially deleted in new
chr5	157266135	157304782	chr5:157266135-157304782	0	+	157266135	157266135	8553170	8	60,140,90,78,102,182,97,545,	0,19203,20883,28647,30537,34579,36658,38102,
#Partially deleted in new
chr5	157266138	157307864	chr5:157266138-157307864	0	+	157285361	157307864	789624	9	57,140,90,78,102,182,97,117,104,	0,19200,20880,28644,30534,34576,36655,38111,41622,
#Partially deleted in new
chr5	157266173	157300893	chr5:157266173-157300893	0	+	157285361	157300893	789624	6	411,140,90,78,102,179,	0,19165,20845,28609,30499,34541,
#Partially deleted in new
chr5	157266710	157302890	chr5:157266710-157302890	0	+	157285361	157302890	789624	7	236,140,90,78,102,182,97,	0,18628,20308,28072,29962,34004,36083,
#Partially deleted in new
chr5	157269341	157393229	chr5:157269341-157393229	1	+	157285361	157393000	789624	31	242,140,90,78,102,182,97,129,105,92,118,120,126,167,148,154,157,97,77,109,120,200,88,144,91,131,73,95,239,148,397,	0,15997,17677,25441,27331,31373,33452,34896,38419,40401,42322,45002,45627,50420,51313,54579,56140,56829,58631,61400,63985,69715,71728,89663,90940,92126,113248,113923,119847,121179,123491,
#Deleted in new
chr5	157269374	157271576	chr5:157269374-157271576	0	+	157269374	157269374	8553170	2	209,168,	0,2034,
#Partially deleted in new
chr5	157300817	157303123	chr5:157300817-157303123	0	+	157300817	157300817	8553170	2	79,330,	0,1976,
#Partially deleted in new
chr5	157311037	157314370	chr5:157311037-157314370	0	+	157311037	157311037	8553170	2	744,27,	0,3306,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	157323920	157328010	chr5:157323920-157328010	0	+	157323920	157325503	789624	5	154,130,157,97,38,	0,850,1561,2250,4052,
#Partially deleted in new
chr5	157325599	157328049	chr5:157325599-157328049	0	+	157325599	157325599	8553170	2	668,77,	0,2373,
#Partially deleted in new
chr5	157327924	157341094	chr5:157327924-157341094	0	+	157327924	157327924	8553170	5	125,109,120,200,25,	0,2817,5402,11132,13145,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	157341595	157460100	chr5:157341595-157460100	3	-	157342861	157343536	8553170	6	1948,276,1744,80,125,93,	0,3945,19865,22930,34786,118412,
#Deleted in new
chr5	157341599	157345721	chr5:157341599-157345721	3	-	157342861	157343536	789624	2	1944,181,	0,3941,
#Deleted in new
chr5	157342995	157345564	chr5:157342995-157345564	0	-	157342995	157343536	789624	2	548,184,	0,2385,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	157361404	157383580	chr5:157361404-157383580	0	+	157361404	157361404	8553170	3	194,73,316,	0,21185,21860,
#Deleted in new
chr5	157363381	157365501	chr5:157363381-157365501	3	-	157363381	157363381	8553170	2	1016,976,	0,1144,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	157375740	157384939	chr5:157375740-157384939	3	-	157375740	157375740	8553170	2	1205,727,	0,8472,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	157380013	157384950	chr5:157380013-157384950	1	-	157380013	157380013	8553170	3	135,81,329,	0,4423,4608,
#Partially deleted in new
chr5	157383231	157393233	chr5:157383231-157393233	0	+	157383231	157383231	8553170	4	128,239,148,401,	0,5957,7289,9601,
#Partially deleted in new
chr5	157383237	157389628	chr5:157383237-157389628	0	+	157383237	157383237	8553170	2	122,440,	0,5951,
#Partially deleted in new
chr5	157383255	157393233	chr5:157383255-157393233	0	+	157383255	157383255	8553170	4	104,239,148,401,	0,5933,7265,9577,
#Partially deleted in new
chr5	157384305	157390638	chr5:157384305-157390638	0	+	157384305	157384305	8553170	3	225,239,118,	0,4883,6215,
#Partially deleted in new
chr5	157384305	157389542	chr5:157384305-157389542	0	+	157384305	157384305	8553170	2	225,354,	0,4883,
#Partially deleted in new
chr5	157422438	157422873	chr5:157422438-157422873	7	+	157422438	157422438	16724991	1	435,	0,
#Partially deleted in new
chr5	157460018	157474717	chr5:157460018-157474717	3	+	157460134	157472960	789624	6	339,240,57,91,161,2386,	0,3075,7030,8703,11638,12313,
#Partially deleted in new
chr5	157460018	157473100	chr5:157460018-157473100	1	+	157460134	157472960	789624	5	339,240,91,161,769,	0,3075,8703,11638,12313,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	157460215	157467968	chr5:157460215-157467968	0	+	157460215	157460215	8553170	4	142,240,57,712,	0,2878,6833,7041,
#Partially deleted in new
chr5	157460254	157472435	chr5:157460254-157472435	0	+	157460254	157467072	789624	7	103,32,240,57,91,161,104,	0,293,2839,6794,8467,11402,12077,
#Partially deleted in new
chr5	157460328	157468740	chr5:157460328-157468740	0	+	157460328	157460328	8553170	4	251,240,57,19,	0,2765,6720,8393,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr5	157477303	157575775	chr5:157477303-157575775	3	-	157480948	157575696	789624	23	3699,153,225,85,145,109,78,205,109,196,90,178,140,85,167,72,66,193,77,79,71,86,173,	0,4487,10961,11798,13006,14311,14531,15669,17383,19590,22269,25499,28365,29752,31997,36130,41519,42535,53503,60609,87069,93591,98299,
#Partially deleted in new
chr5	157477303	157502822	chr5:157477303-157502822	0	-	157477681	157502822	789624	12	432,153,225,85,145,109,78,205,109,196,90,20,	0,4487,10961,11798,13006,14311,14531,15669,17383,19590,22269,25499,
#Partially deleted in new
chr5	157481226	157575741	chr5:157481226-157575741	1	-	157481625	157575696	789624	22	717,225,85,145,109,78,205,109,196,90,178,140,85,167,72,66,193,77,79,71,86,139,	0,7038,7875,9083,10388,10608,11746,13460,15667,18346,21576,24442,25829,28074,32207,37596,38612,49580,56686,83146,89668,94376,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	157565963	157569098	chr5:157565963-157569098	3	+	157565963	157565963	8553170	2	767,1078,	0,2057,
#Partially deleted in new
chr5	157570445	157575757	chr5:157570445-157575757	0	-	157570445	157570445	8553170	2	535,155,	0,5157,
#Partially deleted in new
chr5	157579496	157579599	chr5:157579496-157579599	3	+	157579496	157579496	8553170	1	103,	0,
#Partially deleted in new
chr5	157604706	157605637	chr5:157604706-157605637	7	-	157604706	157604706	16724991	2	232,74,	0,857,
#Partially deleted in new
chr5	157625678	157652420	chr5:157625678-157652420	3	-	157626339	157652078	789624	5	1043,493,180,240,1309,	0,12551,20958,22978,25433,
#Partially deleted in new
chr5	157625678	157652364	chr5:157625678-157652364	1	-	157626602	157652078	789624	4	1043,180,240,1253,	0,20958,22978,25433,
#Partially deleted in new
chr5	157626174	157671480	chr5:157626174-157671480	1	-	157626339	157667849	789624	6	547,493,180,240,55,151,	0,12055,20462,22482,41623,45155,
#Partially deleted in new
chr5	157671552	157680143	chr5:157671552-157680143	3	+	157671614	157679999	789624	3	274,109,303,	0,3539,8288,
#Partially deleted in new
chr5	157682984	157690266	chr5:157682984-157690266	7	-	157682984	157682984	16724991	2	95,333,	0,6949,
#Deleted in new
chr5	157689933	157690878	chr5:157689933-157690878	5	-	157689933	157689933	16724991	1	945,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	157731196	157741448	chr5:157731196-157741448	3	+	157731440	157739482	0	6	435,177,170,89,108,2128,	0,1671,3379,4649,6690,8124,
#Partially deleted in new
chr5	157731419	157739578	chr5:157731419-157739578	0	+	157731440	157734677	789624	6	212,177,75,89,108,258,	0,1448,3251,4426,6467,7901,
#Partially deleted in new
chr5	157737909	157739698	chr5:157737909-157739698	0	+	157737909	157738639	789624	3	85,113,378,	0,712,1411,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	157743694	157760709	chr5:157743694-157760709	3	+	157743750	157755264	789624	4	504,140,84,5856,	0,7695,10309,11159,
#Partially deleted in new
chr5	157747503	157747707	chr5:157747503-157747707	7	-	157747503	157747503	16724991	1	204,	0,
#Partially deleted in new
chr5	157785742	157859145	chr5:157785742-157859145	1	-	157787645	157817534	0	12	2250,205,293,75,70,247,178,165,109,97,105,193,	0,3620,5960,9155,17907,20123,23885,27320,28442,30991,31700,73210,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	157786286	157790561	chr5:157786286-157790561	0	-	157786286	157786286	8553170	2	1706,1199,	0,3076,
#Partially deleted in new
chr5	157786286	157859133	chr5:157786286-157859133	1	-	157787645	157817534	0	12	1706,205,293,75,70,247,178,165,109,97,105,94,	0,3076,5416,8611,17363,19579,23341,26776,27898,30447,31156,72753,
#Partially deleted in new
chr5	157786288	157859175	chr5:157786288-157859175	3	-	157787645	157858970	0	12	1704,151,293,75,70,247,178,165,109,97,105,246,	0,3074,5414,8609,17361,19577,23339,26774,27896,30445,31154,72641,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	157786290	157796145	chr5:157786290-157796145	0	-	157786290	157786290	8553170	4	1702,151,293,1248,	0,3072,5412,8607,
#Partially deleted in new
chr5	157787404	157859143	chr5:157787404-157859143	1	-	157787645	157858970	0	12	588,205,293,75,70,247,178,165,109,97,105,214,	0,1958,4298,7493,16245,18461,22223,25658,26780,29329,30038,71525,
#Partially deleted in new
chr5	157787470	157791724	chr5:157787470-157791724	0	-	157787992	157791724	789624	3	548,151,22,	0,1892,4232,
#Partially deleted in new
chr5	157787601	157791841	chr5:157787601-157791841	0	-	157790624	157791841	789624	4	391,151,52,139,	0,1761,2998,4101,
#Partially deleted in new
chr5	157791619	157806012	chr5:157791619-157806012	0	-	157791619	157791619	8553170	4	376,75,70,147,	0,3278,12030,14246,
#Partially deleted in new
chr5	157791757	157805956	chr5:157791757-157805956	0	-	157791757	157805956	789624	3	238,70,91,	0,11892,14108,
#Deleted in new
chr5	157809097	157809204	chr5:157809097-157809204	3	+	157809097	157809097	8553170	1	107,	0,
#Partially deleted in new
chr5	157931257	157931563	chr5:157931257-157931563	7	-	157931257	157931257	16724991	1	306,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	157976765	157976956	chr5:157976765-157976956	3	-	157976765	157976765	8553170	1	191,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	157984657	157989990	chr5:157984657-157989990	7	-	157984657	157984657	16724991	5	483,203,512,124,348,	0,1217,3058,4339,4985,
#Deleted in new
chr5	157986145	157987706	chr5:157986145-157987706	7	-	157986145	157986145	16724991	1	1561,	0,
#Deleted in new
chr5	158078098	158078764	chr5:158078098-158078764	7	-	158078098	158078098	16724991	1	666,	0,
#Partially deleted in new
chr5	158173600	158176422	chr5:158173600-158176422	3	-	158173600	158173600	8553170	2	203,111,	0,2711,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	158175395	158200016	chr5:158175395-158200016	3	+	158175395	158175395	8553170	2	141,540,	0,24081,
#Deleted in new
chr5	158188976	158189911	chr5:158188976-158189911	7	-	158188976	158188976	16724991	1	935,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	158256136	158258436	chr5:158256136-158258436	3	+	158256136	158256136	8553170	2	29,519,	0,1781,
#Partially deleted in new
chr5	158275710	158278813	chr5:158275710-158278813	3	+	158275710	158275710	8553170	2	190,156,	0,2947,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	158320682	158409773	chr5:158320682-158409773	3	-	158320682	158320682	789624	7	2953,145,204,140,102,76,128,	0,5377,20538,41719,48604,48852,88963,
#Partially deleted in new
chr5	158424584	158452758	chr5:158424584-158452758	3	+	158424584	158424584	8553170	2	106,600,	0,27574,
#Deleted in new
chr5	158464464	158464678	chr5:158464464-158464678	3	+	158464464	158464464	8553170	1	214,	0,
#Partially deleted in new
chr5	158485189	158503392	chr5:158485189-158503392	1	+	158485189	158485189	8553170	3	185,266,240,	0,17501,17963,
#Partially deleted in new
chr5	158485229	158588546	chr5:158485229-158588546	3	+	158485229	158485229	8553170	4	145,503,56,91,	0,48921,49946,103226,
#Partially deleted in new
chr5	158485299	158534438	chr5:158485299-158534438	0	+	158485299	158485299	8553170	2	75,285,	0,48854,
#Partially deleted in new
chr5	158695915	158840123	chr5:158695915-158840123	1	-	158699110	158840112	789624	10	3227,195,180,178,66,89,127,131,142,95,	0,12063,16238,17054,18201,35153,81497,100429,127260,144113,
#Partially deleted in new
chr5	158695919	159099761	chr5:158695919-159099761	3	-	158699110	159099478	0	16	3223,195,180,178,66,89,127,131,142,82,69,74,56,64,157,417,	0,12059,16234,17050,18197,35149,81493,100425,127256,144109,377476,388746,399700,400423,401054,403425,
#Partially deleted in new
chr5	158695919	159099757	chr5:158695919-159099757	0	-	158695919	158695919	8553170	17	3223,195,180,178,66,89,127,131,142,82,69,74,56,64,157,119,175,	0,12059,16234,17050,18197,35149,81493,100425,127256,144109,377476,388746,399700,400423,401054,403425,403663,
#Partially deleted in new
chr5	158695919	159096370	chr5:158695919-159096370	0	-	158695919	158695919	8553170	14	3223,195,180,178,66,89,127,131,142,82,69,74,56,123,	0,12059,16234,17050,18197,35149,81493,100425,127256,144109,377476,388746,399700,400328,
#Partially deleted in new
chr5	158695919	159073794	chr5:158695919-159073794	0	-	158695919	158695919	8553170	12	3223,195,180,178,66,89,127,131,142,82,69,213,	0,12059,16234,17050,18197,35149,81493,100425,127256,144109,377476,377662,
#Partially deleted in new
chr5	158698640	158708009	chr5:158698640-158708009	0	-	158698640	158698640	8553170	3	502,69,31,	0,8927,9338,
#Partially deleted in new
chr5	158698663	159099693	chr5:158698663-159099693	1	-	158699110	159099478	0	15	479,195,180,178,66,89,127,131,118,82,74,56,64,157,349,	0,9315,13490,14306,15453,32405,78749,97681,124536,141365,386002,396956,397679,398310,400681,
#Partially deleted in new
chr5	158698688	159099761	chr5:158698688-159099761	1	-	158699110	159099478	789624	15	454,195,178,66,89,127,131,118,82,69,74,56,64,157,417,	0,9290,14281,15428,32380,78724,97656,124511,141340,374707,385977,396931,397654,398285,400656,
#Partially deleted in new
chr5	158698884	159096606	chr5:158698884-159096606	0	-	158698884	158698884	8553170	14	258,195,180,178,66,89,127,131,142,82,69,74,56,264,	0,9094,13269,14085,15232,32184,78528,97460,124291,141144,374511,385781,396735,397458,
#Partially deleted in new
chr5	158731043	159019129	chr5:158731043-159019129	0	-	158731043	158731043	8553170	6	114,127,131,142,82,170,	0,46369,65301,92132,108985,287916,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	158983005	158984789	chr5:158983005-158984789	3	+	158983005	158983005	8553170	3	265,216,82,	0,542,1702,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	158985805	158987199	chr5:158985805-158987199	3	+	158985805	158985805	8553170	3	134,86,322,	0,565,1072,
#Partially deleted in new
chr5	159084665	159097623	chr5:159084665-159097623	0	-	159084665	159084665	8553170	5	74,56,64,157,139,	0,10954,11677,12308,12819,
#Deleted in new
chr5	159100621	159107217	chr5:159100621-159107217	0	+	159100621	159100621	8553170	2	217,351,	0,6245,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	159100681	159117478	chr5:159100681-159117478	3	+	159100681	159100681	789624	3	157,140,2367,	0,11177,14430,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	159106379	159108617	chr5:159106379-159108617	3	+	159106379	159106379	8553170	1	2238,	0,
#Partially deleted in new
chr5	159157408	159207826	chr5:159157408-159207826	3	-	159158669	159207799	789624	11	1627,357,148,183,141,176,236,92,109,223,72,	0,3857,5523,11464,12270,16574,19223,24551,37307,46025,50346,
#Partially deleted in new
chr5	159157408	159209551	chr5:159157408-159209551	1	-	159158669	159203617	789624	11	1627,357,148,183,141,176,236,92,109,223,321,	0,3857,5523,11464,12270,16574,19223,24551,37307,46025,51822,
#Partially deleted in new
chr5	159157408	159208073	chr5:159157408-159208073	1	-	159158669	159203617	789624	11	1627,357,148,183,141,176,236,92,109,223,186,	0,3857,5523,11464,12270,16574,19223,24551,37307,46025,50479,
#Deleted in new
chr5	159157410	159161580	chr5:159157410-159161580	0	-	159157410	159157410	8553170	2	1625,315,	0,3855,
#Partially deleted in new
chr5	159157412	159209598	chr5:159157412-159209598	1	-	159158669	159203617	789624	12	1623,357,148,183,141,176,236,92,109,223,280,56,	0,3853,5519,11460,12266,16570,19219,24547,37303,46021,51818,52130,
#Deleted in new
chr5	159157823	159161360	chr5:159157823-159161360	0	-	159157823	159157823	8553170	3	603,196,95,	0,1016,3442,
#Partially deleted in new
chr5	159158290	159208132	chr5:159158290-159208132	1	-	159158669	159207896	789624	11	745,357,148,183,141,176,236,92,109,223,248,	0,2975,4641,10582,11388,15692,18341,23669,36425,45143,49594,
#Partially deleted in new
chr5	159158298	159210053	chr5:159158298-159210053	1	-	159158669	159209903	789624	11	737,357,148,183,141,176,236,92,109,223,201,	0,2967,4633,10574,11380,15684,18333,23661,36417,45135,51554,
#Partially deleted in new
chr5	159158520	159207634	chr5:159158520-159207634	1	-	159158669	159207477	789624	11	515,357,148,183,141,176,236,92,109,223,160,	0,2745,4411,10352,11158,15462,18111,23439,36195,44913,48954,
#Partially deleted in new
chr5	159161140	159163028	chr5:159161140-159163028	0	-	159161140	159161140	8553170	2	482,97,	0,1791,
#Partially deleted in new
chr5	159161483	159174041	chr5:159161483-159174041	0	-	159161483	159161483	8553170	5	139,148,64,141,59,	0,1448,7508,8195,12499,
#Partially deleted in new
chr5	159181959	159209791	chr5:159181959-159209791	0	-	159181959	159181959	8553170	4	92,109,223,148,	0,12756,21474,27684,
#Partially deleted in new
chr5	159209920	159248796	chr5:159209920-159248796	3	+	159209920	159209920	8553170	3	111,80,447,	0,1020,38429,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	159227714	159245127	chr5:159227714-159245127	3	+	159227714	159227714	789624	3	28,77,468,	0,1526,16945,
#Deleted in new
chr5	159230193	159230322	chr5:159230193-159230322	3	+	159230193	159230193	8553170	1	129,	0,
#Partially deleted in new
chr5	159263080	159286040	chr5:159263080-159286040	3	+	159268915	159284931	0	11	280,200,92,86,116,99,38,99,117,128,1137,	0,5789,6827,7279,7447,8942,11504,12067,15157,20131,21823,
#Deleted in new
chr5	159274387	159275333	chr5:159274387-159275333	0	+	159274387	159274387	8553170	2	235,186,	0,760,
#Partially deleted in new
chr5	159274541	159286036	chr5:159274541-159286036	0	+	159274541	159274541	8553170	5	81,99,117,128,1133,	0,606,3696,8670,10362,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	159310744	159312634	chr5:159310744-159312634	0	+	159310744	159310744	8553170	2	270,1427,	0,463,
#Partially deleted in new
chr5	159310932	159333182	chr5:159310932-159333182	1	+	159310932	159310932	8553170	4	82,207,121,401,	0,275,14601,21849,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	159314782	159330887	chr5:159314782-159330887	3	-	159316684	159326782	0	8	1318,132,158,215,118,276,88,456,	0,1902,3953,5523,7611,8271,11912,15649,
#Partially deleted in new
chr5	159318041	159318167	chr5:159318041-159318167	3	+	159318041	159318041	8553170	1	126,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	159354068	159426698	chr5:159354068-159426698	1	+	159354068	159354068	8553170	3	53,118,2676,	0,62455,69954,
#Partially deleted in new
chr5	159421213	159557687	chr5:159421213-159557687	1	+	159421213	159421213	8553170	3	259,108,184,	0,2809,136290,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	159448555	159466276	chr5:159448555-159466276	3	-	159448555	159448555	789624	7	901,212,143,377,109,120,150,	0,4026,4833,9869,10985,15662,17571,
#Partially deleted in new
chr5	159484129	159511687	chr5:159484129-159511687	3	-	159484129	159484129	8553170	3	1005,66,103,	0,4098,27455,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	159553001	159805536	chr5:159553001-159805536	1	+	159553001	159553001	8553170	7	44,101,254,131,155,901,2568,	0,61493,66342,100437,233090,247803,249967,
#Deleted in new
chr5	159553007	159557783	chr5:159553007-159557783	0	+	159553007	159553007	8553170	2	38,280,	0,4496,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	159576845	159587991	chr5:159576845-159587991	1	+	159576845	159576845	8553170	5	201,122,118,61,312,	0,3468,6754,10020,10834,
#Partially deleted in new
chr5	159586865	159614595	chr5:159586865-159614595	0	+	159586865	159586865	8553170	2	61,101,	0,27629,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	159698585	159937766	chr5:159698585-159937766	3	-	159698585	159698585	8553170	8	369,194,392,225,58,71,63,118,	0,9493,24895,52319,80044,169272,230449,239063,
#Partially deleted in new
chr5	159698588	159761061	chr5:159698588-159761061	1	-	159698588	159698588	8553170	8	366,251,194,392,143,225,69,122,	0,5737,9490,24892,49644,52316,53152,62351,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	159776771	159871384	chr5:159776771-159871384	1	-	159776771	159776771	789624	3	1916,164,3527,	0,90100,91086,
#Partially deleted in new
chr5	159865079	159917010	chr5:159865079-159917010	0	+	159916905	159917010	789624	3	127,62,298,	0,51039,51633,
#Partially deleted in new
chr5	159865120	159888495	chr5:159865120-159888495	0	+	159865120	159865120	8553170	2	86,451,	0,22924,
#Partially deleted in new
chr5	159916473	159972544	chr5:159916473-159972544	3	+	159916905	159972492	789624	2	1381,666,	0,55405,
#Deleted in new
chr5	159950492	159951498	chr5:159950492-159951498	7	-	159950492	159950492	16724991	1	1006,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	160008444	160008546	chr5:160008444-160008546	3	+	160008444	160008444	8553170	1	102,	0,
#Partially deleted in new
chr5	160009112	160065543	chr5:160009112-160065543	3	+	160010528	160065065	789624	8	81,359,61,113,37,149,55,612,	0,1387,26027,27578,34020,40401,42016,55819,
#Partially deleted in new
chr5	160009112	160065511	chr5:160009112-160065511	1	+	160010528	160065065	789624	8	78,359,61,113,37,149,55,580,	0,1387,26027,27578,34020,40401,42016,55819,
#Deleted in new
chr5	160023739	160024045	chr5:160023739-160024045	7	-	160023739	160023739	16724991	1	306,	0,
#Partially deleted in new
chr5	160036505	160065511	chr5:160036505-160065511	0	+	160036505	160036505	8553170	5	298,37,149,55,580,	0,6627,13008,14623,28426,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	160038914	160065130	chr5:160038914-160065130	0	+	160038914	160038914	8553170	5	286,37,149,55,199,	0,4218,10599,12214,26017,
#Partially deleted in new
chr5	160043132	160065487	chr5:160043132-160065487	0	+	160043132	160065436	789624	5	37,149,55,91,211,	0,6381,7996,21799,22144,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	160061800	160093180	chr5:160061800-160093180	0	-	160089584	160093180	789624	6	293,132,65,92,105,80,	0,1741,4747,4979,27705,31300,
#Partially deleted in new
chr5	160075881	160119423	chr5:160075881-160119423	1	-	160078154	160119388	789624	4	2287,120,965,619,	0,4769,17219,42923,
#Partially deleted in new
chr5	160077843	160093284	chr5:160077843-160093284	0	-	160089584	160093284	789624	4	325,120,105,184,	0,2807,11662,15257,
#Partially deleted in new
chr5	160077932	160119422	chr5:160077932-160119422	1	-	160078154	160119388	789624	3	236,965,618,	0,15168,40872,
#Partially deleted in new
chr5	160091338	160119423	chr5:160091338-160119423	3	-	160092381	160119388	789624	2	2727,619,	0,27466,
#Partially deleted in new
chr5	160093757	160118833	chr5:160093757-160118833	0	-	160094014	160118833	789624	3	308,70,29,	0,14787,25047,
#Partially deleted in new
chr5	160187366	160238735	chr5:160187366-160238735	1	+	160199106	160238659	0	7	88,109,84,79,176,90,130,	0,11682,26369,42179,44731,47453,51239,
#Partially deleted in new
chr5	160195743	160199095	chr5:160195743-160199095	0	-	160195743	160195743	8553170	2	204,257,	0,3095,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	160196590	160204826	chr5:160196590-160204826	3	-	160196590	160196590	8553170	2	2581,105,	0,8131,
#Partially deleted in new
chr5	160213726	160238716	chr5:160213726-160238716	0	+	160213726	160228496	789624	6	93,220,79,176,90,111,	0,14746,15819,18371,21093,24879,
#Partially deleted in new
chr5	160229429	160238716	chr5:160229429-160238716	3	+	160229557	160238659	0	4	195,176,90,111,	0,2668,5390,9176,
#Partially deleted in new
chr5	160232034	160238716	chr5:160232034-160238716	0	+	160232034	160232034	8553170	3	239,90,111,	0,2785,6571,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	160247516	160248217	chr5:160247516-160248217	7	+	160247516	160247516	16724991	1	701,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	160249105	160312577	chr5:160249105-160312577	0	-	160261224	160311923	789624	7	4693,1580,303,257,214,115,214,	0,5023,10363,11975,31419,62752,63258,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	160251651	160312600	chr5:160251651-160312600	1	-	160253377	160311923	789624	7	2147,160,303,144,214,115,237,	0,3897,7817,24617,28873,60206,60712,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	160251652	160339650	chr5:160251652-160339650	0	-	160251652	160251652	789624	8	2146,207,160,303,82,214,124,206,	0,2476,3896,7816,17810,28872,63729,87792,
#Partially deleted in new
chr5	160251656	160312600	chr5:160251656-160312600	1	-	160253377	160311923	789624	6	2142,160,303,214,115,237,	0,3892,7812,28868,60201,60707,
#Partially deleted in new
chr5	160251656	160312928	chr5:160251656-160312928	3	-	160253377	160311923	789624	6	2142,160,303,214,115,184,	0,3892,7812,28868,60201,61088,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	160251663	160281389	chr5:160251663-160281389	1	-	160253377	160281389	789624	6	2135,160,303,144,214,9,	0,3885,7805,24605,28861,29717,
#Partially deleted in new
chr5	160251666	160312556	chr5:160251666-160312556	0	-	160294864	160311923	789624	8	2132,207,160,303,214,236,115,193,	0,2462,3882,7802,28858,43061,60191,60697,
#Partially deleted in new
chr5	160251672	160312577	chr5:160251672-160312577	0	-	160274853	160311923	789624	7	2126,160,303,37,214,115,214,	0,3876,7796,23149,28852,60185,60691,
#Partially deleted in new
chr5	160254300	160312476	chr5:160254300-160312476	1	-	160254319	160311923	789624	6	35,160,303,214,115,113,	0,1248,5168,26224,57557,58063,
#Deleted in new
chr5	160258252	160258585	chr5:160258252-160258585	7	+	160258252	160258252	16724991	1	333,	0,
#Partially deleted in new
chr5	160259589	160312556	chr5:160259589-160312556	0	-	160259589	160280909	789624	4	182,424,115,193,	0,20935,52268,52774,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	160280630	160342716	chr5:160280630-160342716	0	-	160280630	160280630	8553170	3	108,124,315,	0,34751,61771,
#Partially deleted in new
chr5	160326692	160326969	chr5:160326692-160326969	7	+	160326692	160326692	16724991	1	277,	0,
#Partially deleted in new
chr5	160342215	160345396	chr5:160342215-160345396	0	-	160342215	160342215	8553170	2	486,77,	0,3104,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	160347750	160370641	chr5:160347750-160370641	3	-	160349167	160370637	789624	3	2031,253,130,	0,7017,22761,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	160393147	160400097	chr5:160393147-160400097	3	-	160393705	160395490	789624	2	2392,459,	0,6491,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	160393527	160400036	chr5:160393527-160400036	1	-	160393705	160395490	789624	3	2012,74,398,	0,3914,6111,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr5	160401640	160419394	chr5:160401640-160419394	3	-	160403284	160415294	0	16	1824,117,72,105,162,140,68,98,132,48,69,165,81,154,186,372,	0,2799,3168,3390,4827,5835,6105,6330,6688,7009,10810,11815,12258,12678,13484,17382,
#Partially deleted in new
chr5	160403152	160404619	chr5:160403152-160404619	0	-	160403152	160403152	8553170	2	312,180,	0,1287,
#Deleted in new
chr5	160406348	160408421	chr5:160406348-160408421	0	-	160406348	160406348	8553170	5	281,140,68,98,93,	0,1127,1397,1622,1980,
#Deleted in new
chr5	160406364	160407810	chr5:160406364-160407810	0	-	160406364	160406364	8553170	2	265,335,	0,1111,
#Partially deleted in new
chr5	160413594	160421711	chr5:160413594-160421711	0	-	160413594	160415294	789624	5	26,81,154,186,121,	0,304,724,1530,7996,
#Partially deleted in new
chr5	160413801	160419081	chr5:160413801-160419081	0	-	160413801	160413801	8553170	4	178,154,186,59,	0,517,1323,5221,
#Partially deleted in new
chr5	160413931	160419081	chr5:160413931-160419081	0	-	160413931	160415294	789624	5	48,154,186,130,59,	0,387,1193,3180,5091,
#Partially deleted in new
chr5	160414116	160419081	chr5:160414116-160419081	0	-	160414116	160414116	8553170	4	356,186,90,59,	0,1008,4479,4906,
#Partially deleted in new
chr5	160414337	160419081	chr5:160414337-160419081	0	-	160414337	160415294	789624	3	135,186,486,	0,787,4258,
#Partially deleted in new
chr5	160421821	160428744	chr5:160421821-160428744	3	+	160422312	160428681	789624	6	70,102,185,94,159,143,	0,480,887,2415,5893,6780,
#Deleted in new
chr5	160421854	160423003	chr5:160421854-160423003	0	+	160421854	160421854	8553170	3	37,102,295,	0,447,854,
#Partially deleted in new
chr5	160421857	160424294	chr5:160421857-160424294	0	+	160422587	160424294	789624	3	34,592,58,	0,444,2379,
#Partially deleted in new
chr5	160421868	160424777	chr5:160421868-160424777	0	+	160421868	160421868	8553170	4	23,102,185,541,	0,433,840,2368,
#Partially deleted in new
chr5	160421903	160428704	chr5:160421903-160428704	1	+	160422312	160428681	789624	6	252,102,185,94,159,103,	0,398,805,2333,5811,6698,
#Partially deleted in new
chr5	160421909	160428739	chr5:160421909-160428739	1	+	160422312	160428681	789624	5	494,185,94,159,138,	0,799,2327,5805,6692,
#Partially deleted in new
chr5	160422206	160428739	chr5:160422206-160428739	0	+	160422206	160422206	8553170	6	30,64,185,94,159,138,	0,133,502,2030,5508,6395,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	160438593	160487426	chr5:160438593-160487426	0	+	160438593	160438593	8553170	2	76,2128,	0,46705,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	160468267	160487426	chr5:160468267-160487426	3	+	160468267	160468267	789624	2	173,2128,	0,17031,
#Deleted in new
chr5	160474401	160474483	chr5:160474401-160474483	3	+	160474401	160474401	5263520	1	82,	0,
#Deleted in new
chr5	160485351	160485450	chr5:160485351-160485450	3	+	160485351	160485351	789624	1	99,	0,
#Partially deleted in new
chr5	160563119	160852212	chr5:160563119-160852212	3	-	160565452	160688074	789624	26	2781,188,105,81,201,126,77,322,185,127,110,604,192,239,253,128,132,107,86,205,195,295,184,126,245,272,	0,6376,26472,27939,35650,39457,40845,43645,49621,52718,54744,57227,59274,69009,71234,73062,77341,81018,86051,107343,122959,124680,125640,153789,222439,288821,
#Partially deleted in new
chr5	160563119	160685385	chr5:160563119-160685385	1	-	160565452	160685220	789624	21	2781,188,105,81,201,126,77,322,185,127,110,604,192,239,253,128,132,107,86,205,551,	0,6376,26472,27939,35650,39457,40845,43645,49621,52718,54744,57227,59274,69009,71234,73062,77341,81018,86051,107343,121715,
#Deleted in new
chr5	160602565	160603291	chr5:160602565-160603291	0	-	160602565	160602565	8553170	2	137,403,	0,323,
#Partially deleted in new
chr5	160603619	160606916	chr5:160603619-160606916	0	-	160603619	160603619	8553170	2	422,152,	0,3145,
#Deleted in new
chr5	160611796	160612898	chr5:160611796-160612898	0	-	160611796	160611796	8553170	2	200,158,	0,944,
#Partially deleted in new
chr5	160612238	160634558	chr5:160612238-160634558	0	-	160612731	160634558	789624	7	687,127,110,604,192,239,205,	0,3599,5625,8108,10155,19890,22115,
#Partially deleted in new
chr5	160613872	160639183	chr5:160613872-160639183	3	+	160613872	160613872	8553170	2	683,48,	0,25263,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	160632623	160685385	chr5:160632623-160685385	0	-	160632623	160632623	8553170	7	1983,128,132,107,86,205,551,	0,3558,7837,11514,16547,37839,52211,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	160633254	160852212	chr5:160633254-160852212	0	-	160633254	160633254	8553170	11	1352,128,132,107,86,205,195,295,126,245,272,	0,2927,7206,10883,15916,37208,52824,54545,83654,152304,218686,
#Partially deleted in new
chr5	160633752	160852188	chr5:160633752-160852188	0	-	160633752	160633752	8553170	10	854,128,132,107,86,205,195,295,245,248,	0,2429,6708,10385,15418,36710,52326,54047,151806,218188,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	160685350	160692889	chr5:160685350-160692889	3	+	160685350	160685350	8553170	4	37,68,94,259,	0,1649,6385,7280,
#Partially deleted in new
chr5	160686220	160852212	chr5:160686220-160852212	0	-	160686220	160686220	8553170	4	53,295,68,272,	0,1579,99515,165720,
#Partially deleted in new
chr5	160687910	160852154	chr5:160687910-160852154	0	-	160687910	160687910	8553170	4	184,126,68,214,	0,28998,97825,164030,
#Partially deleted in new
chr5	160688819	160852214	chr5:160688819-160852214	0	-	160688819	160688819	8553170	4	124,126,68,274,	0,28089,96916,163121,
#Partially deleted in new
chr5	161288428	161548124	chr5:161288428-161548124	3	-	161294080	161546643	789624	11	6000,114,245,153,138,83,221,68,92,229,66,	0,37939,42454,46323,48203,122546,171195,256798,257893,258138,259630,
#Partially deleted in new
chr5	161288428	161546643	chr5:161288428-161546643	1	-	161294080	161546643	789624	10	6000,114,245,153,138,83,221,68,92,77,	0,37939,42454,46323,48203,122546,171195,256798,257893,258138,
#Partially deleted in new
chr5	161293863	161548227	chr5:161293863-161548227	1	-	161294080	161546643	789624	10	565,245,153,138,83,221,68,92,229,169,	0,37019,40888,42768,117111,165760,251363,252458,252703,254195,
#Partially deleted in new
chr5	161293863	161548135	chr5:161293863-161548135	1	-	161294080	161545274	789624	9	565,245,153,138,83,221,68,229,77,	0,37019,40888,42768,117111,165760,251363,252703,254195,
#Partially deleted in new
chr5	161293863	161548124	chr5:161293863-161548124	1	-	161294080	161546643	789624	10	565,245,153,138,83,221,68,92,229,236,	0,37019,40888,42768,117111,165760,251363,252458,252703,254025,
#Partially deleted in new
chr5	161293897	161546697	chr5:161293897-161546697	1	-	161294080	161411035	789624	7	531,245,153,138,83,68,131,	0,36985,40854,42734,117077,251329,252669,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	161329433	161546679	chr5:161329433-161546679	1	-	161330828	161545274	789624	7	1694,153,138,83,221,68,113,	0,5318,7198,81541,130190,215793,217133,
#Partially deleted in new
chr5	161459134	161546725	chr5:161459134-161546725	0	-	161459134	161459134	8553170	4	710,68,92,159,	0,86092,87187,87432,
#Deleted in new
chr5	161546745	161549044	chr5:161546745-161549044	0	-	161546745	161546745	8553170	3	50,135,382,	0,1143,1917,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	161631729	161685971	chr5:161631729-161685971	0	+	161631729	161631729	8553170	4	104,113,75,273,	0,5054,8564,53969,
#Partially deleted in new
chr5	161685556	161702106	chr5:161685556-161702106	3	+	161685989	161701773	789624	9	471,119,68,221,83,144,153,260,609,	0,673,1379,3392,3697,4079,4644,6384,15941,
#Partially deleted in new
chr5	161685747	161702592	chr5:161685747-161702592	1	+	161685989	161701773	789624	9	280,119,68,191,83,144,153,260,1095,	0,482,1188,3231,3506,3888,4453,6193,15750,
#Deleted in new
chr5	161686061	161689167	chr5:161686061-161689167	0	+	161686061	161686061	8553170	3	287,68,219,	0,874,2887,
#Deleted in new
chr5	161687346	161689408	chr5:161687346-161689408	3	-	161687346	161687346	8553170	2	300,149,	0,1913,
#Deleted in new
chr5	161687479	161690299	chr5:161687479-161690299	0	+	161687479	161690299	789624	5	44,221,83,144,99,	0,1469,1774,2156,2721,
#Deleted in new
chr5	161687495	161690241	chr5:161687495-161690241	0	+	161687495	161690241	789624	5	66,221,83,144,41,	0,1453,1758,2140,2705,
#Deleted in new
chr5	161689038	161690340	chr5:161689038-161690340	0	+	161689038	161690340	789624	4	131,83,219,140,	0,215,522,1162,
#Partially deleted in new
chr5	161689534	161702593	chr5:161689534-161702593	0	+	161689534	161689534	8553170	3	819,260,1096,	0,2406,11963,
#Deleted in new
chr5	161751447	161751768	chr5:161751447-161751768	7	-	161751447	161751447	16724991	1	321,	0,
#Partially deleted in new
chr5	161847062	161898218	chr5:161847062-161898218	1	+	161850810	161897422	789624	11	404,232,89,113,68,221,83,144,153,203,1108,	0,1128,3733,7095,18658,26054,28497,35495,43835,48603,50048,
#Partially deleted in new
chr5	161847190	161897666	chr5:161847190-161897666	1	+	161850810	161897422	789624	11	221,232,89,113,68,221,83,144,153,203,556,	0,1000,3605,6967,18530,25926,28369,35367,43707,48475,49920,
#Partially deleted in new
chr5	161847654	161899954	chr5:161847654-161899954	1	+	161850810	161897422	789624	10	768,89,113,68,221,83,144,153,203,2844,	0,3141,6503,18066,25462,27905,34903,43243,48011,49456,
#Deleted in new
chr5	161847654	161854188	chr5:161847654-161854188	0	+	161850810	161854188	789624	4	59,232,89,31,	0,536,3141,6503,
#Partially deleted in new
chr5	161847678	161899981	chr5:161847678-161899981	3	+	161850810	161897422	789624	11	108,232,89,113,68,221,83,144,153,203,2871,	0,512,3117,6479,18042,25438,27881,34879,43219,47987,49432,
#Partially deleted in new
chr5	161848266	161899929	chr5:161848266-161899929	0	+	161850810	161873087	789624	10	156,89,113,68,280,83,144,153,203,2819,	0,2529,5891,17454,24791,27293,34291,42631,47399,48844,
#Partially deleted in new
chr5	161848333	161898124	chr5:161848333-161898124	0	+	161850810	161854234	789624	11	89,89,62,113,68,221,83,144,153,203,1014,	0,2462,5332,5824,17387,24783,27226,34224,42564,47332,48777,
#Partially deleted in new
chr5	161848443	161899954	chr5:161848443-161899954	1	+	161850810	161897422	789624	10	169,89,113,68,221,83,144,153,203,2844,	0,2352,5714,17277,24673,27116,34114,42454,47222,48667,
#Partially deleted in new
chr5	161848556	161875587	chr5:161848556-161875587	0	+	161850810	161875587	789624	6	56,80,113,68,221,28,	0,2248,5601,17164,24560,27003,
#Partially deleted in new
chr5	161848624	161898178	chr5:161848624-161898178	1	+	161850810	161897422	789624	10	120,89,113,68,221,83,144,153,203,1068,	0,2171,5533,17096,24492,26935,33933,42273,47041,48486,
#Partially deleted in new
chr5	161848891	161865788	chr5:161848891-161865788	0	+	161850810	161865788	789624	4	144,89,113,68,	0,1904,5266,16829,
#Deleted in new
chr5	161848909	161850835	chr5:161848909-161850835	0	+	161848909	161848909	8553170	2	60,40,	0,1886,
#Partially deleted in new
chr5	161848941	161899941	chr5:161848941-161899941	1	+	161850637	161897422	789624	11	94,89,89,113,68,221,83,144,153,203,2831,	0,1637,1854,5216,16779,24175,26618,33616,41956,46724,48169,
#Partially deleted in new
chr5	161850081	161897662	chr5:161850081-161897662	1	+	161850810	161897422	789624	10	212,89,113,68,221,83,144,153,203,552,	0,714,4076,15639,23035,25478,32476,40816,45584,47029,
#Partially deleted in new
chr5	161850385	161873137	chr5:161850385-161873137	0	+	161850637	161873137	789624	5	300,89,113,68,21,	0,410,3772,15335,22731,
#Partially deleted in new
chr5	161850596	161891050	chr5:161850596-161891050	0	+	161850810	161891050	789624	7	288,113,68,221,83,144,153,	0,3561,15124,22520,24963,31961,40301,
#Partially deleted in new
chr5	161850596	161897691	chr5:161850596-161897691	1	+	161850810	161897422	789624	10	84,89,113,68,221,83,144,153,203,581,	0,199,3561,15124,22520,24963,31961,40301,45069,46514,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	161865752	161882314	chr5:161865752-161882314	0	+	161865752	161865752	8553170	4	36,221,83,583,	0,7364,9807,15979,
#Partially deleted in new
chr5	161872215	161899924	chr5:161872215-161899924	0	+	161872215	161872215	8553170	7	59,221,83,144,153,203,2814,	0,901,3344,10342,18682,23450,24895,
#Partially deleted in new
chr5	161873097	161891002	chr5:161873097-161891002	0	+	161873097	161873097	8553170	4	240,83,144,105,	0,2462,9460,17800,
#Partially deleted in new
chr5	161910251	162001196	chr5:161910251-162001196	3	-	161910251	161910251	789624	3	582,248,77,	0,13365,90868,
#Partially deleted in new
chr5	162000056	162155481	chr5:162000056-162155481	1	+	162000206	162153368	789624	5	172,138,153,206,2389,	0,103832,142107,149051,153036,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	162036770	162097662	chr5:162036770-162097662	0	+	162036841	162097662	789624	4	184,152,68,25,	0,57057,58724,60867,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	162061578	162155515	chr5:162061578-162155515	1	+	162095520	162153368	789624	10	331,152,68,221,83,138,153,206,24,2423,	0,32249,33916,36059,39656,42310,80585,87529,90151,91514,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	162061637	162155509	chr5:162061637-162155509	1	+	162095520	162153368	789624	9	272,152,68,221,83,138,153,206,2417,	0,32190,33857,36000,39597,42251,80526,87470,91455,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	162061658	162151191	chr5:162061658-162151191	1	+	162095520	162149343	789624	8	251,152,68,221,83,138,153,2084,	0,32169,33836,35979,39576,42230,80505,87449,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	162067301	162162977	chr5:162067301-162162977	3	+	162067999	162153368	789624	10	805,152,68,221,83,138,153,206,24,9885,	0,26526,28193,30336,33933,36587,74862,81806,84428,85791,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	162067464	162161389	chr5:162067464-162161389	1	+	162067999	162153368	789624	9	642,152,68,221,83,138,153,206,8297,	0,26363,28030,30173,33770,36424,74699,81643,85628,
#Partially deleted in new
chr5	162067464	162155512	chr5:162067464-162155512	1	+	162068065	162153368	789624	10	177,44,152,68,221,83,138,153,206,2420,	0,598,26363,28030,30173,33770,36424,74699,81643,85628,
#Partially deleted in new
chr5	162067481	162155443	chr5:162067481-162155443	1	+	162068065	162153368	789624	11	160,44,152,68,221,83,138,153,206,24,2351,	0,581,26346,28013,30156,33753,36407,74682,81626,84248,85611,
#Partially deleted in new
chr5	162067510	162155472	chr5:162067510-162155472	1	+	162067999	162151759	789624	9	596,152,68,221,83,138,153,206,3743,	0,26317,27984,30127,33724,36378,74653,81597,84219,
#Partially deleted in new
chr5	162067520	162155012	chr5:162067520-162155012	1	+	162067621	162153368	789624	10	121,152,68,221,83,138,153,206,24,1920,	0,26307,27974,30117,33714,36368,74643,81587,84209,85572,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	162067630	162155485	chr5:162067630-162155485	1	+	162067999	162149343	789624	8	476,152,68,221,83,138,153,6378,	0,26197,27864,30007,33604,36258,74533,81477,
#Partially deleted in new
chr5	162067772	162155202	chr5:162067772-162155202	0	+	162067999	162142194	789624	5	334,153,206,24,2110,	0,74391,81335,83957,85320,
#Partially deleted in new
chr5	162067774	162155522	chr5:162067774-162155522	1	+	162067999	162153368	789624	11	332,152,68,221,83,120,138,153,206,24,2430,	0,26053,27720,29863,33460,34779,36114,74389,81333,83955,85318,
#Partially deleted in new
chr5	162067775	162094760	chr5:162067775-162094760	0	+	162067775	162067775	8553170	2	331,933,	0,26052,
#Partially deleted in new
chr5	162067873	162155485	chr5:162067873-162155485	1	+	162067999	162153368	789624	10	233,152,68,221,83,120,138,153,206,2393,	0,25954,27621,29764,33361,34680,36015,74290,81234,85219,
#Partially deleted in new
chr5	162067873	162154045	chr5:162067873-162154045	0	+	162067999	162097708	789624	9	233,152,68,159,83,138,153,206,953,	0,25954,27621,29826,33361,36015,74290,81234,85219,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	162067937	162142913	chr5:162067937-162142913	0	+	162067937	162067937	8553170	7	169,152,68,221,83,138,750,	0,25890,27557,29700,33297,35951,74226,
#Partially deleted in new
chr5	162067999	162155499	chr5:162067999-162155499	1	+	162067999	162153368	789624	9	107,152,68,221,83,138,153,206,2500,	0,25828,27495,29638,33235,35889,74164,81108,85000,
#Partially deleted in new
chr5	162068037	162155473	chr5:162068037-162155473	0	+	162068037	162153368	789624	11	69,152,68,221,83,138,39,153,206,24,2381,	0,25790,27457,29600,33197,35851,61185,74126,81070,83692,85055,
#Partially deleted in new
chr5	162068037	162153804	chr5:162068037-162153804	0	+	162068037	162083549	789624	10	69,121,152,68,221,83,138,153,206,712,	0,15463,25790,27457,29600,33197,35851,74126,81070,85055,
#Partially deleted in new
chr5	162068037	162153426	chr5:162068037-162153426	0	+	162068037	162103904	789624	6	69,138,153,206,24,334,	0,35851,74126,81070,83692,85055,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	162068039	162100419	chr5:162068039-162100419	0	+	162068039	162068039	8553170	4	67,152,68,2782,	0,25788,27455,29598,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	162068039	162155480	chr5:162068039-162155480	0	+	162068039	162068039	8553170	8	67,152,68,221,2792,153,2646,2388,	0,25788,27455,29598,33195,74124,81068,85053,
#Partially deleted in new
chr5	162068060	162155520	chr5:162068060-162155520	0	+	162068060	162097708	789624	10	46,152,68,159,83,138,153,206,24,2428,	0,25767,27434,29639,33174,35828,74103,81047,83669,85032,
#Partially deleted in new
chr5	162068071	162155176	chr5:162068071-162155176	0	+	162068071	162151132	789624	10	35,152,68,221,83,138,153,206,759,2084,	0,25756,27423,29566,33163,35817,74092,81036,82923,85021,
#Partially deleted in new
chr5	162094533	162149166	chr5:162094533-162149166	0	+	162094533	162094533	8553170	7	150,68,221,83,138,153,59,	0,961,3104,6701,9355,47630,54574,
#Partially deleted in new
chr5	162128321	162155515	chr5:162128321-162155515	0	+	162128321	162128321	8553170	4	67,153,206,2423,	0,13842,20786,24771,
#Partially deleted in new
chr5	162128365	162153787	chr5:162128365-162153787	0	+	162128365	162128365	8553170	5	23,153,206,24,695,	0,13798,20742,23364,24727,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	162424041	162551258	chr5:162424041-162551258	1	-	162424041	162424041	8553170	4	896,138,189,2430,	0,3264,122996,124787,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	162424377	162473347	chr5:162424377-162473347	1	-	162424377	162424377	8553170	3	560,138,187,	0,2928,48783,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	162477890	162477993	chr5:162477890-162477993	3	+	162477890	162477890	8553170	1	103,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr5	162507827	162795830	chr5:162507827-162795830	3	-	162507827	162507827	8553170	14	179,146,143,189,92,106,280,110,121,160,76,147,240,25,	0,27090,31002,39210,41001,44211,48203,50467,51109,53957,83782,115507,116147,287978,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr5	162555598	163437293	chr5:162555598-163437293	0	-	162555598	162555598	8553170	15	712,110,205,160,76,147,240,124,114,94,392,102,118,93,111,	0,2696,3254,6186,36011,67736,68376,104503,240207,454191,456298,533646,870204,873342,881584,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	162558684	162623461	chr5:162558684-162623461	1	-	162558684	162558684	8553170	4	373,160,76,127,	0,3100,32925,64650,
#Partially deleted in new
chr5	162761832	162762313	chr5:162761832-162762313	7	+	162761832	162761832	16724991	1	481,	0,
#Deleted in new
chr5	163039290	163039599	chr5:163039290-163039599	7	+	163039290	163039290	16724991	1	309,	0,
#Deleted in new
chr5	163256070	163256987	chr5:163256070-163256987	0	-	163256070	163256070	8553170	2	200,137,	0,780,
#Partially deleted in new
chr5	163416524	163416731	chr5:163416524-163416731	7	+	163416524	163416524	16724991	1	207,	0,
#Partially deleted in new
chr5	163437568	163443729	chr5:163437568-163443729	1	+	163441215	163442565	789624	6	236,254,79,99,195,56,	0,3509,4317,4476,4805,6105,
#Partially deleted in new
chr5	163437570	163445014	chr5:163437570-163445014	3	+	163439256	163442565	789624	8	94,40,264,254,79,99,195,1341,	0,194,1686,3507,4315,4474,4803,6103,
#Partially deleted in new
chr5	163437570	163439602	chr5:163437570-163439602	0	+	163437570	163437570	8553170	2	234,346,	0,1686,
#Partially deleted in new
chr5	163437580	163445016	chr5:163437580-163445016	1	+	163439256	163442565	789624	7	224,264,254,79,99,195,1343,	0,1676,3497,4305,4464,4793,6093,
#Partially deleted in new
chr5	163437594	163441221	chr5:163437594-163441221	0	+	163439256	163441221	789624	3	156,264,144,	0,1662,3483,
#Partially deleted in new
chr5	163437606	163441157	chr5:163437606-163441157	0	+	163439256	163441157	789624	4	63,11,264,80,	0,187,1650,3471,
#Partially deleted in new
chr5	163437613	163443892	chr5:163437613-163443892	1	+	163439333	163442565	789624	7	191,90,121,79,99,195,219,	0,1643,3597,4272,4431,4760,6060,
#Partially deleted in new
chr5	163437765	163444078	chr5:163437765-163444078	0	+	163437765	163437765	8553170	6	39,254,79,99,195,405,	0,3312,4120,4279,4608,5908,
#Deleted in new
chr5	163439190	163441287	chr5:163439190-163441287	0	+	163439190	163439190	8553170	2	330,210,	0,1887,
#Partially deleted in new
chr5	163441177	163444073	chr5:163441177-163444073	1	+	163441215	163443703	789624	4	154,79,99,400,	0,708,867,2496,
#Deleted in new
chr5	163441655	163442538	chr5:163441655-163442538	0	+	163441655	163441655	8553170	3	309,99,165,	0,389,718,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	163443756	163446151	chr5:163443756-163446151	0	+	163443756	163443756	8553170	3	169,145,248,	0,580,2147,
#Deleted in new
chr5	163443795	163444965	chr5:163443795-163444965	0	+	163443795	163443795	8553170	2	130,629,	0,541,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	163446525	163460140	chr5:163446525-163460140	3	-	163453966	163460050	789624	4	7525,152,49,279,	0,10403,11036,13336,
#Partially deleted in new
chr5	163453922	163460055	chr5:163453922-163460055	1	-	163453966	163460050	789624	4	128,77,49,194,	0,3006,3639,5939,
#Partially deleted in new
chr5	163456963	163459490	chr5:163456963-163459490	0	-	163456963	163456963	8553170	3	117,49,496,	0,598,2031,
#Partially deleted in new
chr5	163456987	163459836	chr5:163456987-163459836	0	-	163456987	163456987	8553170	3	93,49,510,	0,574,2339,
#Partially deleted in new
chr5	163460202	163471463	chr5:163460202-163471463	0	+	163469712	163471463	789624	6	164,99,80,189,87,101,	0,3653,4520,9438,10982,11160,
#Partially deleted in new
chr5	163460341	163471435	chr5:163460341-163471435	0	+	163469712	163471435	789624	6	81,99,80,189,87,73,	0,3514,4381,9299,10843,11021,
#Partially deleted in new
chr5	163460365	163491579	chr5:163460365-163491579	1	+	163460692	163491164	789624	17	373,99,80,189,87,101,75,179,149,215,117,147,153,100,177,163,468,	0,3490,4357,9275,10819,10997,12813,13013,13691,15092,18318,22276,22654,22902,23703,30024,30746,
#Partially deleted in new
chr5	163460549	163491945	chr5:163460549-163491945	1	+	163460692	163491164	789624	18	189,99,80,48,189,87,101,75,179,149,215,117,147,153,100,177,163,834,	0,3306,4173,7151,9091,10635,10813,12629,12829,13507,14908,18134,22092,22470,22718,23519,29840,30562,
#Partially deleted in new
chr5	163460633	163491238	chr5:163460633-163491238	1	+	163460726	163491164	789624	15	105,189,87,101,75,179,149,215,117,147,153,100,177,163,127,	0,9007,10551,10729,12545,12745,13423,14824,18050,22008,22386,22634,23435,29756,30478,
#Partially deleted in new
chr5	163460652	163465208	chr5:163460652-163465208	0	+	163460652	163460652	8553170	3	86,99,486,	0,3203,4070,
#Partially deleted in new
chr5	163460656	163491941	chr5:163460656-163491941	3	+	163460692	163491164	789624	18	82,99,80,45,189,87,101,75,179,149,215,117,147,153,100,177,163,830,	0,3199,4066,7047,8984,10528,10706,12522,12722,13400,14801,18027,21985,22363,22611,23412,29733,30455,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	163460659	163469910	chr5:163460659-163469910	0	+	163460659	163460659	8553170	4	79,99,80,270,	0,3196,4063,8981,
#Partially deleted in new
chr5	163503113	163519336	chr5:163503113-163519336	1	+	163503394	163518363	0	7	311,195,115,153,194,114,1144,	0,8888,10441,10728,13404,14447,15079,
#Partially deleted in new
chr5	163503251	163512400	chr5:163503251-163512400	0	+	163503251	163503251	8553170	2	173,399,	0,8750,
#Partially deleted in new
chr5	163505547	163519322	chr5:163505547-163519322	3	+	163505686	163518363	0	7	202,195,115,153,194,114,1130,	0,6454,8007,8294,10970,12013,12645,
#Partially deleted in new
chr5	163505583	163517630	chr5:163505583-163517630	0	+	163505686	163517630	789624	5	166,115,153,194,70,	0,7971,8258,10934,11977,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	163505613	163519327	chr5:163505613-163519327	1	+	163505686	163516771	0	5	136,195,115,153,2810,	0,6388,7941,8228,10904,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	163505625	163519149	chr5:163505625-163519149	0	+	163505625	163505625	8553170	6	124,1668,153,194,114,957,	0,6376,8216,10892,11935,12567,
#Partially deleted in new
chr5	163505638	163516615	chr5:163505638-163516615	0	+	163505686	163513937	789624	4	111,195,153,98,	0,6363,8203,10879,
#Partially deleted in new
chr5	163517216	163519322	chr5:163517216-163519322	0	+	163517216	163517216	8553170	3	186,210,1130,	0,248,976,
#Partially deleted in new
chr5	163597351	163612516	chr5:163597351-163612516	3	-	163597351	163597351	8553170	3	337,65,143,	0,4458,15022,
#Deleted in new
chr5	163709209	163709514	chr5:163709209-163709514	7	-	163709209	163709209	16724991	1	305,	0,
#Deleted in new
chr5	163796064	163796165	chr5:163796064-163796165	3	-	163796064	163796064	8553170	1	101,	0,
#Deleted in new
chr5	163855139	163856642	chr5:163855139-163856642	7	-	163855139	163855139	16724991	2	1164,156,	0,1347,
#Deleted in new
chr5	163887505	163887827	chr5:163887505-163887827	7	-	163887505	163887505	16724991	1	322,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	164119097	164234097	chr5:164119097-164234097	3	-	164119097	164119097	8553170	5	179,212,119,96,68,	0,75047,111232,112675,114932,
#Deleted in new
chr5	164209630	164211892	chr5:164209630-164211892	3	+	164209630	164209630	8553170	2	34,355,	0,1907,
#Partially deleted in new
chr5	164296968	164543362	chr5:164296968-164543362	1	+	164296968	164296968	8553170	5	228,84,68,186,517,	0,57172,189705,245101,245877,
#Partially deleted in new
chr5	164296977	165171643	chr5:164296977-165171643	3	+	164296977	164296977	8553170	6	219,84,43,61,44,266,	0,57163,425787,623157,710391,874400,
#Partially deleted in new
chr5	164296983	164722807	chr5:164296983-164722807	0	+	164296983	164296983	8553170	4	213,84,68,43,	0,57157,189690,425781,
#Partially deleted in new
chr5	164297061	165171613	chr5:164297061-165171613	0	+	164297061	164297061	8553170	5	135,68,43,44,236,	0,189612,425703,710307,874316,
#Partially deleted in new
chr5	164297128	165171613	chr5:164297128-165171613	0	+	164297128	164297128	8553170	6	68,84,73,43,44,236,	0,57012,189540,425636,710240,874249,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	164354139	164602434	chr5:164354139-164602434	1	+	164354139	164354139	8553170	3	85,73,1460,	0,132529,246835,
#Partially deleted in new
chr5	164354152	164487142	chr5:164354152-164487142	0	+	164354152	164354152	8553170	2	72,469,	0,132521,
#Partially deleted in new
chr5	164448421	164467402	chr5:164448421-164467402	3	-	164448421	164448421	789624	4	218,182,64,56,	0,810,16377,18925,
#Partially deleted in new
chr5	164467289	164542107	chr5:164467289-164542107	1	+	164467289	164467289	8553170	5	207,89,94,68,38,	0,1275,1515,19384,74780,
#Deleted in new
chr5	164467960	164468645	chr5:164467960-164468645	0	+	164467960	164467960	8553170	2	452,81,	0,604,
#Partially deleted in new
chr5	164468865	164487037	chr5:164468865-164487037	0	+	164468865	164468865	8553170	2	33,364,	0,17808,
#Partially deleted in new
chr5	164470278	164542984	chr5:164470278-164542984	1	+	164470278	164470278	789624	4	190,68,186,139,	0,16395,71791,72567,
#Deleted in new
chr5	164601001	164601452	chr5:164601001-164601452	7	-	164601001	164601001	16724991	1	451,	0,
#Partially deleted in new
chr5	164601222	164724138	chr5:164601222-164724138	1	+	164601222	164601222	8553170	5	40,132,75,43,226,	0,125,3595,121542,122690,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	164935161	164935268	chr5:164935161-164935268	3	-	164935161	164935161	8553170	1	107,	0,
#Partially deleted in new
chr5	164973487	165130233	chr5:164973487-165130233	0	+	164973487	164973487	8553170	3	73,44,420,	0,33881,156326,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	165129306	165153014	chr5:165129306-165153014	3	-	165129306	165129306	8553170	4	878,77,99,143,	0,10867,22148,23565,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	165220576	165241752	chr5:165220576-165241752	3	-	165220576	165220576	8553170	3	1444,296,124,	0,19885,21052,
#Partially deleted in new
chr5	165349029	165778689	chr5:165349029-165778689	3	+	165349029	165349029	8553170	2	21,713,	0,428947,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	165609440	165609679	chr5:165609440-165609679	3	+	165609440	165609440	8553170	1	239,	0,
#Deleted in new
chr5	165782804	165783134	chr5:165782804-165783134	7	-	165782804	165782804	16724991	1	330,	0,
#Deleted in new
chr5	165905125	165905608	chr5:165905125-165905608	7	+	165905125	165905125	16724991	1	483,	0,
#Deleted in new
chr5	166028566	166029311	chr5:166028566-166029311	7	-	166028566	166028566	16724991	1	745,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	166128497	166155439	chr5:166128497-166155439	3	+	166128497	166128497	8553170	3	153,98,282,	0,5515,26660,
#Deleted in new
chr5	166382304	166382599	chr5:166382304-166382599	7	+	166382304	166382304	16724991	1	295,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	167116317	167119585	chr5:167116317-167119585	3	-	167116317	167116317	8553170	2	375,115,	0,3153,
#Deleted in new
chr5	167164933	167168401	chr5:167164933-167168401	3	-	167164933	167164933	789624	2	432,198,	0,3270,
#Partially deleted in new
chr5	167284798	168262996	chr5:167284798-168262996	3	+	167284837	168262810	789624	29	265,276,210,235,239,123,206,196,102,195,201,213,147,211,120,262,268,144,250,21,233,155,875,176,236,297,1615,131,948,	0,90399,591187,667789,708145,762628,777261,805775,813227,833493,840051,841955,877812,905538,910377,914054,915065,918890,919573,926935,930241,931969,933326,941289,943096,959621,961958,975484,977250,
#Partially deleted in new
chr5	167287319	167294273	chr5:167287319-167294273	3	-	167287319	167287319	8553170	2	500,23,	0,6931,
#Partially deleted in new
chr5	167306272	167309870	chr5:167306272-167309870	3	-	167306272	167306272	8553170	3	339,116,72,	0,1663,3526,
#Partially deleted in new
chr5	167573973	167993014	chr5:167573973-167993014	0	+	167573973	167573973	8553170	4	53,210,235,71,	0,302012,378614,418970,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	167653227	167660481	chr5:167653227-167660481	3	-	167653227	167653227	8553170	2	700,424,	0,6830,
#Partially deleted in new
chr5	167721362	167729124	chr5:167721362-167729124	3	+	167721362	167721362	8553170	2	45,429,	0,7333,
#Partially deleted in new
chr5	167754935	168264157	chr5:167754935-168264157	1	+	167755053	168262810	789624	28	257,210,235,239,123,206,196,102,195,201,213,147,211,120,262,268,144,250,21,233,155,875,176,236,297,1615,131,2109,	0,121050,197652,238008,292491,307124,335638,343090,363356,369914,371818,407675,435401,440240,443917,444928,448753,449436,456798,460104,461832,463189,471152,472959,489484,491821,505347,507113,
#Partially deleted in new
chr5	167755002	168263185	chr5:167755002-168263185	1	+	167755053	168262810	789624	25	190,235,239,206,196,102,195,201,213,147,211,120,262,268,144,250,233,155,875,176,236,297,1615,131,1137,	0,197585,237941,307057,335571,343023,363289,369847,371751,407608,435334,440173,443850,444861,448686,449369,460037,461765,463122,471085,472892,489417,491754,505280,507046,
#Partially deleted in new
chr5	167821067	167952655	chr5:167821067-167952655	0	+	167821067	167821067	8553170	3	219,210,68,	0,54918,131520,
#Partially deleted in new
chr5	167934861	168047462	chr5:167934861-168047462	0	+	167934861	167934861	8553170	4	59,235,239,36,	0,17726,58082,112565,
#Partially deleted in new
chr5	167937716	167953469	chr5:167937716-167953469	3	-	167937716	167937716	8553170	4	375,107,103,78,	0,808,11099,15675,
#Partially deleted in new
chr5	167952374	167993043	chr5:167952374-167993043	0	+	167952374	167952374	8553170	2	448,100,	0,40569,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	167965186	167967086	chr5:167965186-167967086	3	-	167965186	167965186	8553170	2	392,97,	0,1803,
#Deleted in new
chr5	168033090	168033205	chr5:168033090-168033205	3	-	168033090	168033090	8553170	1	115,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	168085328	168187719	chr5:168085328-168187719	3	-	168085328	168085328	8553170	6	217,162,86,43,64,1609,	0,1950,2894,79808,99806,100782,
#Deleted in new
chr5	168128855	168130422	chr5:168128855-168130422	3	+	168128855	168128855	8553170	1	1567,	0,
#Partially deleted in new
chr5	168162693	168190874	chr5:168162693-168190874	0	+	168162693	168162693	8553170	2	64,538,	0,27643,
#Partially deleted in new
chr5	168226247	168241112	chr5:168226247-168241112	0	+	168226247	168226247	8553170	3	16,236,203,	0,1647,14662,
#Partially deleted in new
chr5	168229582	168232357	chr5:168229582-168232357	3	-	168229582	168229582	789624	3	278,171,54,	0,1303,2721,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr5	168291650	168472303	chr5:168291650-168472303	3	+	168292152	168469017	0	23	621,110,204,77,80,130,147,74,243,90,536,109,81,87,193,153,92,133,165,93,234,125,3353,	0,79773,93560,106073,107837,114547,116856,118271,122697,130357,131882,136382,137056,138486,139601,150031,152843,162317,163705,168999,173078,176189,177300,
#Partially deleted in new
chr5	168292149	168469216	chr5:168292149-168469216	1	+	168292152	168469017	0	23	122,110,204,77,80,130,147,74,243,90,536,109,81,87,193,153,92,133,165,93,252,125,266,	0,79274,93061,105574,107338,114048,116357,117772,122198,129858,131383,135883,136557,137987,139102,149532,152344,161818,163206,168500,172561,175690,176801,
#Partially deleted in new
chr5	168292245	168408608	chr5:168292245-168408608	0	+	168292245	168292245	8553170	6	26,110,204,77,80,102,	0,79178,92965,105478,107242,116261,
#Partially deleted in new
chr5	168316619	168397786	chr5:168316619-168397786	0	+	168316619	168316619	8553170	4	185,110,204,63,	0,54804,68591,81104,
#Partially deleted in new
chr5	168371420	168469756	chr5:168371420-168469756	0	+	168371420	168469017	789624	22	113,204,77,80,130,147,74,243,90,536,109,81,87,193,153,92,133,165,93,252,122,806,	0,13790,26303,28067,34777,37086,38501,42927,50587,52112,56612,57286,58716,59831,70261,73073,82547,83935,89229,93290,96422,97530,
#Partially deleted in new
chr5	168406257	168410180	chr5:168406257-168410180	0	+	168406257	168406257	8553170	3	70,147,259,	0,2249,3664,
#Partially deleted in new
chr5	168406278	168469757	chr5:168406278-168469757	0	+	168406278	168469017	789624	18	49,147,74,243,90,536,109,81,87,193,153,92,133,165,93,234,122,807,	0,2228,3643,8069,15729,17254,21754,22428,23858,24973,35403,38215,47689,49077,54371,58450,61564,62672,
#Partially deleted in new
chr5	168408584	168414488	chr5:168408584-168414488	0	+	168408584	168408584	8553170	3	39,74,141,	0,1337,5763,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	168414071	168416522	chr5:168414071-168416522	0	+	168414071	168414071	8553170	1	2451,	0,
#Partially deleted in new
chr5	168414129	168423592	chr5:168414129-168423592	0	+	168414129	168414129	8553170	3	461,90,60,	0,7878,9403,
#Partially deleted in new
chr5	168428704	168454001	chr5:168428704-168454001	0	+	168428704	168428704	8553170	5	83,87,193,92,34,	0,1432,2547,15789,25263,
#Partially deleted in new
chr5	168430158	168469759	chr5:168430158-168469759	0	+	168430158	168469017	789624	10	65,193,153,92,133,165,93,252,122,809,	0,1093,11523,14335,23809,25197,30491,34552,37684,38792,
#Partially deleted in new
chr5	168431363	168467888	chr5:168431363-168467888	0	+	168431363	168431363	8553170	8	81,168,92,133,165,93,234,49,	0,10318,13130,22604,23992,29286,33365,36476,
#Partially deleted in new
chr5	168464927	168472303	chr5:168464927-168472303	0	+	168464927	168464927	8553170	3	35,122,229,	0,2915,7147,
#Partially deleted in new
chr5	168467692	168469221	chr5:168467692-168469221	0	+	168467692	168467692	8553170	2	272,271,	0,1258,
#Partially deleted in new
chr5	168486444	168519299	chr5:168486444-168519299	3	+	168486498	168519190	0	15	99,135,189,109,101,122,121,130,105,179,110,106,173,248,219,	0,2157,6214,7449,8105,8870,10783,14146,15556,19576,20277,24136,30333,31370,32636,
#Partially deleted in new
chr5	168486450	168493187	chr5:168486450-168493187	0	+	168486450	168486450	8553170	3	93,135,529,	0,2151,6208,
#Partially deleted in new
chr5	168486481	168495333	chr5:168486481-168495333	0	+	168486498	168493922	789624	6	62,135,133,109,101,19,	0,2120,6177,7412,8068,8833,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	168486485	168494736	chr5:168486485-168494736	0	+	168486485	168486485	8553170	5	58,135,189,109,187,	0,2116,6173,7408,8064,
#Partially deleted in new
chr5	168486490	168519298	chr5:168486490-168519298	0	+	168486498	168494570	789624	14	53,135,189,101,122,121,130,105,179,110,106,173,248,218,	0,2111,6168,8059,8824,10737,14100,15510,19530,20231,24090,30287,31324,32590,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	168488691	168495151	chr5:168488691-168495151	0	+	168488691	168488691	8553170	4	45,189,109,602,	0,3967,5202,5858,
#Partially deleted in new
chr5	168497011	168506030	chr5:168497011-168506030	0	+	168497011	168497011	8553170	4	337,130,103,10,	0,3579,4991,9009,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	168497217	168502035	chr5:168497217-168502035	0	+	168497217	168497217	8553170	4	131,100,130,35,	0,729,3373,4783,
#Deleted in new
chr5	168529115	168530634	chr5:168529115-168530634	3	+	168529504	168530509	789624	1	1519,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	168548494	168579600	chr5:168548494-168579600	3	-	168557570	168579283	0	7	9127,126,124,177,254,353,345,	0,10537,12898,15394,17518,20151,30761,
#Deleted in new
chr5	168552276	168553727	chr5:168552276-168553727	7	-	168552276	168552276	16724991	1	1451,	0,
#Partially deleted in new
chr5	168557610	168566064	chr5:168557610-168566064	0	-	168557610	168557610	8553170	4	11,126,124,52,	0,1421,3782,8402,
#Deleted in new
chr5	168560895	168560973	chr5:168560895-168560973	3	-	168560895	168560895	5263520	1	78,	0,
#Deleted in new
chr5	168560903	168560965	chr5:168560903-168560965	3	+	168560903	168560903	5263520	1	62,	0,
#Partially deleted in new
chr5	168566236	168579350	chr5:168566236-168579350	0	-	168566236	168568981	789624	4	30,353,74,95,	0,2409,12397,13019,
#Deleted in new
chr5	168616351	168616996	chr5:168616351-168616996	7	+	168616351	168616351	16724991	1	645,	0,
#Partially deleted in new
chr5	168654512	168667761	chr5:168654512-168667761	3	+	168654512	168654512	8553170	3	243,402,165,	0,11843,13084,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr5	168661732	168883338	chr5:168661732-168883338	1	-	168666453	168883338	789624	32	4957,209,286,155,131,241,138,94,140,98,146,164,72,72,72,69,133,164,144,144,75,151,164,144,72,72,72,142,164,72,72,74,	0,8050,9465,11444,22233,23954,25246,30874,34559,38849,46243,49162,50550,60523,61200,62683,86569,87739,91222,92131,99129,100806,111048,112502,124174,127827,133774,144713,155567,161527,182851,221532,
#Boundary problem: need 36, got 0, diff 36, mapped 0.0
chr5	168661739	169301129	chr5:168661739-169301129	3	-	168666453	169300709	789624	36	4950,209,286,155,131,241,138,94,140,98,125,164,72,72,72,69,133,164,144,144,75,151,164,144,72,72,72,142,164,72,72,72,72,72,72,617,	0,8043,9458,11437,22226,23947,25239,30867,34552,38842,46236,49155,50543,60516,61193,62676,86562,87732,91215,92124,99122,100799,111041,112495,124167,127820,133767,144706,155560,161520,182844,221525,531739,582965,589648,638773,
#Partially deleted in new
chr5	168666224	169300782	chr5:168666224-169300782	1	-	168666453	169300709	789624	36	465,209,286,155,131,241,138,94,140,98,146,164,72,72,72,69,133,164,144,144,75,151,164,144,72,72,72,142,164,72,72,72,72,72,72,270,	0,3558,4973,6952,17741,19462,20754,26382,30067,34357,41751,44670,46058,56031,56708,58191,82077,83247,86730,87639,94637,96314,106556,108010,119682,123335,129282,140221,151075,157035,178359,217040,527254,578480,585163,634288,
#Partially deleted in new
chr5	168683965	168696311	chr5:168683965-168696311	0	-	168683965	168683965	8553170	5	131,211,138,94,20,	0,1751,3013,8641,12326,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	168706566	168720884	chr5:168706566-168720884	1	+	168706566	168706566	789624	6	2081,146,96,92,117,946,	0,3488,5718,6113,11502,13372,
#Partially deleted in new
chr5	168706926	168710081	chr5:168706926-168710081	2	+	168706926	168706926	8553170	3	341,211,27,	0,1510,3128,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	168752402	168792341	chr5:168752402-168792341	0	-	168752402	168752402	8553170	8	696,144,75,151,164,144,72,2782,	0,1461,8459,10136,20378,21832,33504,37157,
#Deleted in new
chr5	168768145	168768255	chr5:168768145-168768255	3	-	168768145	168768145	5263520	1	110,	0,
#Partially deleted in new
chr5	168772186	169300746	chr5:168772186-169300746	0	-	168772186	168772186	8553170	14	758,144,72,72,72,142,164,72,72,72,72,72,72,234,	0,2048,13720,17373,23320,34259,45113,51073,72397,111078,421292,472518,479201,528326,
#Partially deleted in new
chr5	168774234	168844832	chr5:168774234-168844832	0	-	168774234	168774234	8553170	8	144,72,72,72,142,164,72,249,	0,11672,15325,21272,32211,43065,49025,70349,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	168791497	168791610	chr5:168791497-168791610	3	+	168791497	168791497	8553170	1	113,	0,
#Partially deleted in new
chr5	168992999	168995677	chr5:168992999-168995677	3	+	168992999	168992999	8553170	3	62,114,189,	0,1075,2489,
#Deleted in new
chr5	169012147	169013146	chr5:169012147-169013146	3	-	169012147	169012147	8553170	1	999,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	169013226	169036408	chr5:169013226-169036408	3	+	169013226	169013226	789624	4	158,87,71,278,	0,13084,17159,22904,
#Partially deleted in new
chr5	169013247	169018702	chr5:169013247-169018702	0	+	169013247	169013247	8553170	3	137,110,310,	0,4584,5145,
#Partially deleted in new
chr5	169013247	169024088	chr5:169013247-169024088	0	+	169013247	169013247	8553170	4	137,96,57,258,	0,8885,10436,10583,
#Partially deleted in new
chr5	169013247	169036470	chr5:169013247-169036470	0	+	169013247	169013247	8553170	3	137,96,340,	0,8885,22883,
#Partially deleted in new
chr5	169013247	169026631	chr5:169013247-169026631	0	+	169013247	169013247	8553170	4	137,249,96,321,	0,5145,8885,13063,
#Partially deleted in new
chr5	169013247	169022871	chr5:169013247-169022871	1	+	169013247	169013247	8553170	5	137,110,102,96,128,	0,4584,5145,8885,9496,
#Partially deleted in new
chr5	169013260	169026391	chr5:169013260-169026391	0	+	169013260	169013260	8553170	3	124,249,81,	0,5132,13050,
#Partially deleted in new
chr5	169013261	169022211	chr5:169013261-169022211	0	+	169013261	169013261	8553170	4	123,110,249,79,	0,4570,5131,8871,
#Partially deleted in new
chr5	169013263	169024987	chr5:169013263-169024987	1	+	169013263	169013263	8553170	4	121,96,115,1157,	0,8869,10362,10567,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	169030437	169037998	chr5:169030437-169037998	0	+	169030437	169030437	8553170	3	19,235,318,	0,5693,7243,
#Partially deleted in new
chr5	169119870	169300777	chr5:169119870-169300777	0	-	169119870	169119870	8553170	5	491,72,72,72,265,	0,73608,124834,131517,180642,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	169263600	169263694	chr5:169263600-169263694	3	-	169263600	169263600	5263520	1	94,	0,
#Partially deleted in new
chr5	169583633	169604778	chr5:169583633-169604778	3	+	169588416	169604207	789624	12	256,182,177,195,150,99,111,141,104,188,346,719,	0,4760,7414,9720,10511,10760,10937,12927,14842,15338,17646,20426,
#Partially deleted in new
chr5	169583635	169591148	chr5:169583635-169591148	0	+	169588416	169591148	789624	4	254,174,182,101,	0,3563,4758,7412,
#Partially deleted in new
chr5	169583737	169591153	chr5:169583737-169591153	0	+	169588416	169591153	789624	4	152,112,182,106,	0,3523,4656,7310,
#Partially deleted in new
chr5	169583749	169602021	chr5:169583749-169602021	0	+	169588416	169591108	789624	11	140,97,177,195,150,99,111,141,104,188,742,	0,4644,7298,9604,10395,10644,10821,12811,14726,15222,17530,
#Partially deleted in new
chr5	169583755	169596178	chr5:169583755-169596178	0	+	169583755	169583755	8553170	8	134,182,177,195,150,99,111,569,	0,4638,7292,9598,10389,10638,10815,11854,
#Partially deleted in new
chr5	169583755	169590779	chr5:169583755-169590779	1	+	169588416	169590779	789624	3	134,182,24,	0,4638,7000,
#Partially deleted in new
chr5	169583759	169593466	chr5:169583759-169593466	0	+	169588416	169593466	789624	4	130,203,177,113,	0,4613,7288,9594,
#Partially deleted in new
chr5	169583772	169586398	chr5:169583772-169586398	0	+	169583772	169583772	8553170	2	117,448,	0,2178,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	169583786	169594403	chr5:169583786-169594403	0	+	169588416	169594403	789624	7	103,79,182,177,195,150,10,	0,301,4607,7261,9567,10358,10607,
#Partially deleted in new
chr5	169583787	169591074	chr5:169583787-169591074	0	+	169588416	169590779	789624	5	102,174,182,74,27,	0,3411,4606,6968,7260,
#Partially deleted in new
chr5	169583787	169593485	chr5:169583787-169593485	0	+	169588416	169590779	789624	5	102,182,74,177,132,	0,4606,6968,7260,9566,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	169584028	169593493	chr5:169584028-169593493	0	+	169588416	169593493	789624	4	138,182,177,140,	0,4365,7019,9325,
#Partially deleted in new
chr5	169587258	169588843	chr5:169587258-169588843	0	+	169587258	169587258	8553170	2	114,450,	0,1135,
#Partially deleted in new
chr5	169588534	169593427	chr5:169588534-169593427	0	+	169588534	169590779	789624	4	41,77,177,74,	0,2218,2513,4819,
#Partially deleted in new
chr5	169591103	169599010	chr5:169591103-169599010	0	+	169591103	169599010	789624	8	121,195,150,99,111,117,104,39,	0,2250,3041,3290,3467,5481,7372,7868,
#Deleted in new
chr5	169595273	169596080	chr5:169595273-169596080	0	+	169595273	169595273	8553170	2	18,471,	0,336,
#Partially deleted in new
chr5	169637246	170083382	chr5:169637246-170083382	3	+	169637326	170082858	0	52	123,84,41,56,97,149,136,155,82,136,76,77,126,125,99,73,104,184,98,90,101,135,109,71,107,149,96,99,95,79,101,59,149,86,157,41,91,120,90,105,142,82,85,87,177,84,138,128,172,121,143,587,	0,17156,32041,33295,33831,37050,44497,46949,52005,58556,61127,62135,62767,65056,70922,74688,74873,76781,77113,78966,80137,81410,110149,122458,124272,165811,203510,345821,348581,358839,371250,371441,381713,390616,397152,399268,403808,404766,408569,410263,413009,418058,419437,420333,430263,431890,438700,440463,441728,442916,444595,445549,
#Partially deleted in new
chr5	169637267	169654806	chr5:169637267-169654806	0	+	169637267	169637267	8553170	2	102,404,	0,17135,
#Partially deleted in new
chr5	169637274	170083382	chr5:169637274-170083382	1	+	169637326	170082858	789624	52	95,84,41,56,97,149,136,155,82,136,76,77,126,125,99,73,104,184,98,90,101,135,109,71,107,149,96,99,95,79,101,59,149,86,157,41,91,120,90,105,142,82,85,87,177,84,138,128,172,121,143,587,	0,17128,32013,33267,33803,37022,44469,46921,51977,58528,61099,62107,62739,65028,70894,74660,74845,76753,77085,78938,80109,81382,110121,122430,124244,165783,203482,345793,348553,358811,371222,371413,381685,390588,397124,399240,403780,404738,408541,410235,412981,418030,419409,420305,430235,431862,438672,440435,441700,442888,444567,445521,
#Partially deleted in new
chr5	169637285	169681865	chr5:169637285-169681865	0	+	169637285	169637285	8553170	7	84,84,41,56,97,149,136,	0,17117,32002,33256,33792,37011,44444,
#Partially deleted in new
chr5	169637290	170082934	chr5:169637290-170082934	0	+	169637326	169997997	789624	53	79,84,41,56,97,149,136,155,82,136,76,77,126,125,99,73,104,184,98,90,101,135,109,71,107,149,96,99,95,79,51,101,59,149,86,157,41,91,120,90,105,142,82,85,87,177,84,138,128,172,121,143,139,	0,17112,31997,33251,33787,37006,44453,46905,51961,58512,61083,62091,62723,65012,70878,74644,74829,76737,77069,78922,80093,81366,110105,122414,124228,165767,203466,345777,348537,358795,360683,371206,371397,381669,390572,397108,399224,403764,404722,408525,410219,412965,418014,419393,420289,430219,431846,438656,440419,441684,442872,444551,445505,
#Partially deleted in new
chr5	169695178	169702427	chr5:169695178-169702427	0	+	169695871	169702427	8553170	6	38,136,76,77,126,125,	0,624,3195,4203,4835,7124,
#Partially deleted in new
chr5	169695285	169700039	chr5:169695285-169700039	0	+	169695871	169700039	8553170	5	79,136,76,77,26,	0,517,3088,4096,4728,
#Partially deleted in new
chr5	169695848	169702623	chr5:169695848-169702623	0	+	169695848	169695848	8553170	5	90,76,77,126,321,	0,2525,3533,4165,6454,
#Partially deleted in new
chr5	169702129	169875876	chr5:169702129-169875876	1	+	169702391	169875294	789624	12	74,125,73,104,184,44,75,71,107,149,96,651,	0,173,9805,9990,11898,12230,45300,57575,59389,100928,138627,173096,
#Partially deleted in new
chr5	169703948	170083379	chr5:169703948-170083379	0	+	169703948	169703948	8553170	38	127,99,73,184,98,90,101,135,109,71,107,149,96,99,95,79,101,59,149,86,157,41,91,120,90,105,142,82,85,87,177,84,138,128,172,121,143,584,	0,4220,7986,10079,10411,12264,13435,14708,43447,55756,57570,99109,136808,279119,281879,292137,304548,304739,315011,323914,330450,332566,337106,338064,341867,343561,346307,351356,352735,353631,363561,365188,371998,373761,375026,376214,377893,378847,
#Partially deleted in new
chr5	169718745	169841535	chr5:169718745-169841535	0	+	169718745	169718745	8553170	7	46,109,71,107,149,96,135,	0,28650,40959,42773,84312,122011,122655,
#Partially deleted in new
chr5	169747425	169875877	chr5:169747425-169875877	0	+	169747425	169747425	8553170	6	79,71,107,149,96,652,	0,12279,14093,55632,93331,127800,
#Partially deleted in new
chr5	169759716	169934871	chr5:169759716-169934871	0	+	169759716	169934726	789624	5	59,107,149,96,220,	0,1802,43341,81040,174935,
#Partially deleted in new
chr5	169761306	169840838	chr5:169761306-169840838	0	+	169761306	169761306	8553170	3	319,149,82,	0,41751,79450,
#Partially deleted in new
chr5	169772965	169779365	chr5:169772965-169779365	3	-	169772965	169772965	8553170	2	217,66,	0,6334,
#Partially deleted in new
chr5	169864263	169980740	chr5:169864263-169980740	3	-	169864272	169883898	789624	4	196,75,2264,464,	0,17104,18289,116013,
#Partially deleted in new
chr5	169884374	169980448	chr5:169884374-169980448	0	-	169884374	169884374	8553170	2	442,153,	0,95921,
#Partially deleted in new
chr5	169983107	170000471	chr5:169983107-170000471	0	+	169983107	169983107	8553170	4	59,95,79,441,	0,2720,12978,16923,
#Partially deleted in new
chr5	170008496	170034508	chr5:170008496-170034508	0	+	170008496	170019026	789624	4	101,149,86,110,	0,10463,19366,25902,
#Deleted in new
chr5	170028487	170028566	chr5:170028487-170028566	3	+	170028487	170028487	5263520	1	79,	0,
#Deleted in new
chr5	170040634	170042060	chr5:170040634-170042060	0	+	170040634	170040634	8553170	2	511,48,	0,1378,
#Partially deleted in new
chr5	170056437	170083377	chr5:170056437-170083377	0	+	170056437	170056437	8553170	9	1229,177,84,138,128,172,121,143,582,	0,11072,12699,19509,21272,22537,23725,25404,26358,
#Partially deleted in new
chr5	170075443	170083377	chr5:170075443-170083377	0	+	170075443	170075443	8553170	4	641,128,3010,582,	0,2266,3531,7352,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	170105896	170109725	chr5:170105896-170109725	3	+	170105957	170108611	789624	2	635,1677,	0,2152,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	170105912	170109723	chr5:170105912-170109723	1	+	170105957	170108611	789624	2	619,1390,	0,2421,
#Deleted in new
chr5	170140663	170141940	chr5:170140663-170141940	7	-	170140663	170140663	16724991	1	1277,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	170191578	170199141	chr5:170191578-170199141	3	-	170191578	170191578	789624	4	685,91,148,1390,	0,2337,4905,6173,
#Partially deleted in new
chr5	170196574	170199100	chr5:170196574-170199100	0	-	170196574	170196574	8553170	3	57,78,359,	0,1177,2167,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	170232446	170246228	chr5:170232446-170246228	0	+	170232446	170232446	8553170	3	1752,94,267,	0,2530,13515,
#Partially deleted in new
chr5	170232911	170252575	chr5:170232911-170252575	1	+	170234976	170251655	789624	4	96,84,94,928,	0,1203,2065,18736,
#Partially deleted in new
chr5	170232916	170246231	chr5:170232916-170246231	3	+	170234976	170246113	789624	4	91,84,94,270,	0,1198,2060,13045,
#Partially deleted in new
chr5	170232939	170252203	chr5:170232939-170252203	1	+	170234976	170251655	789624	3	68,94,556,	0,2037,18708,
#Partially deleted in new
chr5	170232983	170246231	chr5:170232983-170246231	1	+	170234976	170237323	789624	5	24,84,94,95,270,	0,1131,1993,4287,12978,
#Partially deleted in new
chr5	170234931	170246228	chr5:170234931-170246228	0	+	170234931	170234931	8553170	2	139,267,	0,11030,
#Partially deleted in new
chr5	170246236	170298227	chr5:170246236-170298227	3	-	170248696	170297611	0	21	2583,156,78,95,50,130,13,31,108,20,26,84,67,98,199,38,32,66,47,63,694,	0,4493,6197,6882,10289,11800,12629,14870,16398,16605,16730,20571,20772,22148,24482,28064,29083,29558,41733,47073,51297,
#Partially deleted in new
chr5	170247571	170251692	chr5:170247571-170251692	0	-	170247571	170247571	8553170	2	1248,963,	0,3158,
#Partially deleted in new
chr5	170248084	170297818	chr5:170248084-170297818	1	-	170248696	170297611	789624	20	735,156,78,95,50,130,44,108,20,26,84,67,98,199,38,32,66,47,63,285,	0,2645,4349,5034,8441,9952,13009,14550,14757,14882,18723,18924,20300,22634,26216,27235,27710,39885,45225,49449,
#Partially deleted in new
chr5	170248299	170267296	chr5:170248299-170267296	1	-	170248696	170267081	789624	13	520,156,78,95,50,130,13,31,108,20,26,84,288,	0,2430,4134,4819,8226,9737,10566,12807,14335,14542,14667,18508,18709,
#Deleted in new
chr5	170256525	170258498	chr5:170256525-170258498	0	-	170256525	170256525	8553170	2	50,462,	0,1511,
#Partially deleted in new
chr5	170256556	170267327	chr5:170256556-170267327	0	-	170256556	170267081	789624	8	19,130,13,31,108,20,26,319,	0,1480,2309,4550,6078,6285,6410,10452,
#Partially deleted in new
chr5	170270499	170297727	chr5:170270499-170297727	0	-	170270499	170270499	8553170	7	418,38,32,66,47,63,194,	0,3801,4820,5295,17470,22810,27034,
#Partially deleted in new
chr5	170273780	170297729	chr5:170273780-170297729	0	-	170273780	170273780	8553170	6	558,32,66,47,63,196,	0,1539,2014,14189,19529,23753,
#Partially deleted in new
chr5	170275624	170297815	chr5:170275624-170297815	0	-	170275624	170275624	8553170	4	236,47,63,282,	0,12345,17685,21909,
#Partially deleted in new
chr5	170287716	170297784	chr5:170287716-170297784	0	-	170287716	170287716	8553170	3	300,63,251,	0,5593,9817,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	170308700	170312716	chr5:170308700-170312716	3	-	170308700	170308700	789624	2	2004,178,	0,3838,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	170331428	170333760	chr5:170331428-170333760	0	+	170331428	170331428	789624	3	130,90,627,	0,1419,1705,
#Partially deleted in new
chr5	170331429	170333710	chr5:170331429-170333710	0	+	170331429	170331429	8553170	2	148,577,	0,1704,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	170331430	170333879	chr5:170331430-170333879	3	+	170331430	170331430	789624	3	147,90,746,	0,1417,1703,
#Partially deleted in new
chr5	170353486	170735935	chr5:170353486-170735935	3	+	170353876	170735806	0	8	478,125,70,71,108,105,63,177,	0,365271,366834,368346,369226,379313,380349,382272,
#Partially deleted in new
chr5	170353486	170483157	chr5:170353486-170483157	0	+	170353486	170353486	8553170	2	478,98,	0,129573,
#Partially deleted in new
chr5	170353688	170485970	chr5:170353688-170485970	0	+	170353876	170483100	789624	4	276,136,126,101,	0,129371,130408,132181,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	170374670	170389677	chr5:170374670-170389677	3	-	170378703	170385447	789624	4	4303,172,158,419,	0,9008,10643,14588,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	170382651	170389634	chr5:170382651-170389634	1	-	170383591	170385447	789624	3	1199,158,376,	0,2662,6607,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	170389492	170422844	chr5:170389492-170422844	3	+	170389492	170389492	789624	3	111,230,874,	0,30893,32478,
#Partially deleted in new
chr5	170483805	170486407	chr5:170483805-170486407	3	-	170483805	170483805	8553170	2	176,391,	0,2211,
#Partially deleted in new
chr5	170504035	170736632	chr5:170504035-170736632	1	+	170504572	170735806	789624	8	598,125,70,71,108,105,63,874,	0,214722,216285,217797,218677,228764,229800,231723,
#Partially deleted in new
chr5	170504035	170736630	chr5:170504035-170736630	1	+	170718759	170735806	789624	9	598,162,125,70,146,108,105,63,872,	0,165463,214722,216285,217722,218677,228764,229800,231723,
#Partially deleted in new
chr5	170504359	170736625	chr5:170504359-170736625	1	+	170718780	170735806	0	9	274,162,125,70,71,108,105,63,867,	0,165139,214398,215961,217473,218353,228440,229476,231399,
#Partially deleted in new
chr5	170504572	170735806	chr5:170504572-170735806	1	+	170504572	170735806	0	9	61,33,125,70,71,108,105,63,48,	0,208281,214185,215748,217260,218140,228227,229263,231186,
#Partially deleted in new
chr5	170504572	170735806	chr5:170504572-170735806	1	+	170504572	170735806	0	8	61,125,70,146,108,105,63,48,	0,214185,215748,217185,218140,228227,229263,231186,
#Partially deleted in new
chr5	170639157	170681437	chr5:170639157-170681437	3	-	170639157	170639157	789624	6	389,91,156,333,317,285,	0,2897,39249,39770,41352,41995,
#Partially deleted in new
chr5	170680952	170736604	chr5:170680952-170736604	1	+	170681068	170735806	789624	8	225,125,70,71,108,105,63,846,	0,37805,39368,40880,41760,51847,52883,54806,
#Partially deleted in new
chr5	170712852	170736630	chr5:170712852-170736630	1	+	170712852	170735806	789624	8	34,125,70,71,108,105,63,872,	0,5905,7468,8980,9860,19947,20983,22906,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	170747046	170758179	chr5:170747046-170758179	1	-	170747046	170747046	8553170	3	147,136,319,	0,6466,10814,
#Duplicated in new
chr5	170763349	170797521	chr5:170763349-170797521	0	+	170788615	170797521	789624	6	165,95,119,68,218,56,	0,25224,25779,30881,31858,34116,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	170767203	170788650	chr5:170767203-170788650	3	-	170767203	170767203	8553170	3	340,138,96,	0,21000,21351,
#Partially deleted in new
chr5	170772564	170805742	chr5:170772564-170805742	0	+	170788615	170805742	789624	7	90,95,119,68,218,83,27,	0,16009,16564,21666,22643,24901,33151,
#Partially deleted in new
chr5	170782681	170814047	chr5:170782681-170814047	3	+	170788615	170812258	789624	11	238,184,95,119,68,218,83,138,153,188,2092,	0,1009,5892,6447,11549,12526,14784,23034,25918,26886,29274,
#Partially deleted in new
chr5	170782692	170789232	chr5:170782692-170789232	0	+	170788615	170789232	789624	4	227,156,95,104,	0,1026,5881,6436,
#Partially deleted in new
chr5	170783718	170814047	chr5:170783718-170814047	1	+	170788615	170812258	789624	10	156,95,119,68,218,83,138,153,188,2092,	0,4855,5410,10512,11489,13747,21997,24881,25849,28237,
#Partially deleted in new
chr5	170783724	170812498	chr5:170783724-170812498	1	+	170788615	170811993	789624	9	150,95,119,68,218,83,138,153,543,	0,4849,5404,10506,11483,13741,21991,24875,28231,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	170783746	170810076	chr5:170783746-170810076	1	+	170788615	170810012	789624	10	128,95,119,68,218,83,138,153,188,94,	0,4827,5382,10484,11461,13719,21969,24853,25821,26236,
#Partially deleted in new
chr5	170789142	170794388	chr5:170789142-170794388	0	+	170789142	170789142	8553170	2	105,158,	0,5088,
#Partially deleted in new
chr5	170861869	170911409	chr5:170861869-170911409	0	+	170861869	170861869	8553170	7	182,147,91,167,66,105,441,	0,16227,19936,30517,34180,47791,49099,
#Partially deleted in new
chr5	170861869	171300015	chr5:170861869-171300015	3	+	170862033	171298858	789624	28	182,147,91,167,66,105,166,74,120,147,173,194,106,136,74,81,64,109,104,89,108,83,215,139,167,99,128,1254,	0,16227,19936,30517,34180,47791,49099,52297,54595,56843,57571,62487,91727,106372,308260,309336,321297,321452,337800,343654,351761,359888,379058,380812,403811,432013,434017,436892,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr5	170861931	171298858	chr5:170861931-171298858	0	+	170862033	171028892	789624	30	120,147,91,167,66,105,166,74,120,147,173,194,106,136,118,74,81,64,109,104,89,108,83,215,139,167,166,99,128,97,	0,16165,19874,30455,34118,47729,49037,52235,54533,56781,57509,62425,91665,106310,166940,308198,309274,321235,321390,337738,343592,351699,359826,378996,380750,403749,422581,431951,433955,436830,
#Partially deleted in new
chr5	170862017	171243064	chr5:170862017-171243064	0	+	170862033	171028892	789624	27	34,147,91,167,66,105,166,74,120,147,173,194,106,136,118,161,60,74,81,64,109,104,89,108,83,215,383,	0,16079,19788,30369,34032,47643,48951,52149,54447,56695,57423,62339,91579,106224,166854,296316,299389,308112,309188,321149,321304,337652,343506,351613,359740,378910,380664,
#Partially deleted in new
chr5	170862017	171300015	chr5:170862017-171300015	0	+	170862033	171028892	789624	30	34,147,91,167,66,105,166,74,120,147,173,194,106,136,118,60,74,81,64,109,104,89,108,83,215,139,167,99,128,1254,	0,16079,19788,30369,34032,47643,48951,52149,54447,56695,57423,62339,91579,106224,166854,299389,308112,309188,321149,321304,337652,343506,351613,359740,378910,380664,403663,431865,433869,436744,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr5	170862017	171300015	chr5:170862017-171300015	0	+	170862033	170983097	789624	30	34,147,91,167,66,105,166,74,120,147,173,194,106,136,181,118,74,81,64,109,104,89,108,83,215,139,167,99,128,1254,	0,16079,19788,30369,34032,47643,48951,52149,54447,56695,57423,62339,91579,106224,121047,166854,308112,309188,321149,321304,337652,343506,351613,359740,378910,380664,403663,431865,433869,436744,
#Partially deleted in new
chr5	170862017	171300015	chr5:170862017-171300015	0	+	170862033	171028892	789624	29	34,147,91,167,66,105,166,74,120,147,173,194,106,136,118,74,81,64,109,104,89,108,83,215,139,167,99,128,1254,	0,16079,19788,30369,34032,47643,48951,52149,54447,56695,57423,62339,91579,106224,166854,308112,309188,321149,321304,337652,343506,351613,359740,378910,380664,403663,431865,433869,436744,
#Partially deleted in new
chr5	170862022	170911342	chr5:170862022-170911342	0	+	170862022	170862022	8553170	6	29,147,91,167,66,1682,	0,16074,19783,30364,34027,47638,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr5	170862034	171207903	chr5:170862034-171207903	0	+	170862034	171028892	789624	20	17,147,91,167,105,166,74,120,147,173,194,106,136,118,74,81,64,109,104,2380,	0,16062,19771,30352,47626,48934,52132,54430,56678,57406,62322,91562,106207,166837,308095,309171,321132,321287,337635,343489,
#Partially deleted in new
chr5	170863485	170892490	chr5:170863485-170892490	0	+	170881886	170892490	789624	4	200,147,91,104,	0,14611,18320,28901,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	170866834	170867144	chr5:170866834-170867144	3	+	170866834	170866834	8553170	1	310,	0,
#Partially deleted in new
chr5	170881838	170896238	chr5:170881838-170896238	0	+	170881838	170881838	8553170	3	58,167,189,	0,10548,14211,
#Partially deleted in new
chr5	170896928	170904461	chr5:170896928-170904461	7	+	170896928	170896928	16724991	2	419,918,	0,6615,
#Partially deleted in new
chr5	170911027	170924407	chr5:170911027-170924407	0	+	170911027	170924407	789624	5	107,74,120,173,51,	0,3139,5437,8413,13329,
#Partially deleted in new
chr5	170918170	170953668	chr5:170918170-170953668	0	+	170918170	170918170	8553170	5	151,147,173,194,72,	0,542,1270,6186,35426,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	170919450	170970658	chr5:170919450-170970658	0	+	170919450	170919450	8553170	5	163,194,106,136,167,	0,4906,34146,48791,51041,
#Deleted in new
chr5	170924355	170924918	chr5:170924355-170924918	0	+	170924355	170924355	8553170	2	195,180,	0,383,
#Partially deleted in new
chr5	170953620	170968506	chr5:170953620-170968506	0	+	170953620	170953620	8553170	2	82,265,	0,14621,
#Partially deleted in new
chr5	170968255	171029200	chr5:170968255-171029200	0	+	170968255	171028892	789624	3	122,118,56,	0,60616,60889,
#Partially deleted in new
chr5	171143266	171299177	chr5:171143266-171299177	0	+	171143266	171143266	8553170	13	202,74,109,104,89,108,83,215,139,167,99,128,416,	0,26863,40055,56403,62257,70364,78491,97661,99415,122414,150616,152620,155495,
#Partially deleted in new
chr5	171143271	171205607	chr5:171143271-171205607	0	+	171143271	171143271	8553170	6	197,74,36,109,104,84,	0,26858,39923,40050,56398,62252,
#Partially deleted in new
chr5	171143311	171205579	chr5:171143311-171205579	0	+	171143311	171143311	8553170	6	157,60,74,109,104,56,	0,18095,26818,40010,56358,62212,
#Partially deleted in new
chr5	171143320	171213682	chr5:171143320-171213682	0	+	171143320	171143320	8553170	8	148,74,81,64,109,104,89,52,	0,26809,27885,39846,40001,56349,62203,70310,
#Partially deleted in new
chr5	171241032	171271619	chr5:171241032-171271619	0	+	171241032	171241032	8553170	4	110,139,167,469,	0,1649,24648,30118,
#Partially deleted in new
chr5	171251865	171252982	chr5:171251865-171252982	7	+	171251865	171251865	16724991	1	1117,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	171305979	171309777	chr5:171305979-171309777	3	-	171305979	171305979	8553170	2	2812,244,	0,3554,
#Deleted in new
chr5	171309283	171312134	chr5:171309283-171312134	3	+	171309365	171311599	789624	3	503,244,746,	0,866,2105,
#Partially deleted in new
chr5	171345342	171345630	chr5:171345342-171345630	7	-	171345342	171345342	16724991	1	288,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	171359116	171359412	chr5:171359116-171359412	3	+	171359116	171359116	8553170	1	296,	0,
#Partially deleted in new
chr5	171365594	171367693	chr5:171365594-171367693	7	+	171365594	171365594	16724991	4	121,82,410,259,	0,438,1109,1840,
#Partially deleted in new
chr5	171366117	171366252	chr5:171366117-171366252	3	+	171366117	171366117	5263520	1	135,	0,
#Partially deleted in new
chr5	171366298	171366611	chr5:171366298-171366611	7	+	171366298	171366298	16724991	1	313,	0,
#Deleted in new
chr5	171386655	171386760	chr5:171386655-171386760	3	-	171386655	171386655	5263520	1	105,	0,
#Partially deleted in new
chr5	171387115	171410883	chr5:171387115-171410883	3	+	171387948	171410565	0	12	119,74,80,120,94,107,65,58,87,102,75,357,	0,817,2935,4189,4590,5594,5798,13037,13723,18186,20584,23411,
#Partially deleted in new
chr5	171387647	171411137	chr5:171387647-171411137	1	+	171387948	171410565	0	11	359,80,120,94,107,65,58,87,102,75,611,	0,2403,3657,4058,5062,5266,12505,13191,17654,20052,22879,
#Partially deleted in new
chr5	171387798	171400155	chr5:171387798-171400155	0	+	171391358	171400155	789624	6	208,120,94,107,65,3,	0,3506,3907,4911,5115,12354,
#Partially deleted in new
chr5	171387828	171410884	chr5:171387828-171410884	1	+	171387948	171410565	0	10	178,80,120,94,107,65,58,102,75,358,	0,2222,3476,3877,4881,5085,12324,17473,19871,22698,
#Partially deleted in new
chr5	171387850	171407125	chr5:171387850-171407125	1	+	171387948	171406405	0	10	156,80,120,94,107,65,58,87,102,729,	0,2200,3454,3855,4859,5063,12302,12988,17451,18546,
#Deleted in new
chr5	171387851	171390163	chr5:171387851-171390163	0	+	171387851	171387851	8553170	2	155,113,	0,2199,
#Partially deleted in new
chr5	171387880	171391369	chr5:171387880-171391369	0	+	171387948	171391369	789624	3	126,56,65,	0,2194,3424,
#Partially deleted in new
chr5	171387884	171392963	chr5:171387884-171392963	0	+	171387884	171387884	8553170	5	122,80,120,94,254,	0,2166,3420,3821,4825,
#Partially deleted in new
chr5	171390093	171391777	chr5:171390093-171391777	0	+	171390093	171390093	8553170	2	37,473,	0,1211,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	171391082	171391749	chr5:171391082-171391749	0	+	171391082	171391082	8553170	2	342,44,	0,623,
#Partially deleted in new
chr5	171400785	171405732	chr5:171400785-171405732	0	+	171400785	171400785	8553170	2	140,431,	0,4516,
#Partially deleted in new
chr5	171407492	171410884	chr5:171407492-171410884	0	+	171407492	171407492	8553170	2	282,358,	0,3034,
#Partially deleted in new
chr5	171419655	171457623	chr5:171419655-171457623	3	+	171420199	171456805	0	5	576,37,181,107,1085,	0,751,16437,29491,36883,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	171724574	171737519	chr5:171724574-171737519	3	-	171724574	171724574	8553170	5	1682,84,127,316,543,	0,8398,10177,11439,12402,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	171773651	171774739	chr5:171773651-171774739	3	+	171773651	171773651	8553170	2	307,398,	0,690,
#Partially deleted in new
chr5	171782431	171791136	chr5:171782431-171791136	0	+	171782431	171782431	8553170	4	328,52,68,342,	0,7798,8050,8363,
#Partially deleted in new
chr5	171785865	171791136	chr5:171785865-171791136	1	+	171785871	171791088	789624	4	111,52,68,342,	0,4364,4616,4929,
#Partially deleted in new
chr5	171785865	171796126	chr5:171785865-171796126	0	+	171785871	171791088	789624	8	111,52,68,626,65,98,128,171,	0,4364,4616,4929,7432,8699,9867,10090,
#Partially deleted in new
chr5	171785871	171794598	chr5:171785871-171794598	3	+	171785871	171794598	789624	5	105,52,68,209,34,	0,4358,4610,4923,8693,
#Partially deleted in new
chr5	171861548	172006873	chr5:171861548-172006873	1	-	171868634	172006502	789624	13	2553,187,79,111,119,250,119,138,91,187,226,63,416,	0,7061,8180,9199,11323,14736,16462,29918,37455,38365,49023,52794,144909,
#Partially deleted in new
chr5	171861551	172006640	chr5:171861551-172006640	3	-	171868634	172006502	789624	13	2550,187,79,111,119,250,119,138,91,187,226,102,183,	0,7058,8177,9196,11320,14733,16459,29915,37452,38362,49020,96045,144906,
#Partially deleted in new
chr5	171863620	172006650	chr5:171863620-172006650	1	-	171868634	172006502	789624	12	481,187,79,111,119,250,119,138,91,187,226,193,	0,4989,6108,7127,9251,12664,14390,27846,35383,36293,46951,142837,
#Partially deleted in new
chr5	171863926	172006649	chr5:171863926-172006649	0	-	171996952	172006502	789624	14	175,187,79,111,119,250,119,138,91,187,226,63,162,192,	0,4683,5802,6821,8945,12358,14084,27540,35077,35987,46645,50416,132963,142531,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	171867777	171868662	chr5:171867777-171868662	0	-	171867777	171867777	8553170	2	372,53,	0,832,
#Partially deleted in new
chr5	171867834	171876291	chr5:171867834-171876291	0	-	171867834	171867834	8553170	6	210,187,79,111,119,7,	0,775,1894,2913,5037,8450,
#Partially deleted in new
chr5	171876401	171908859	chr5:171876401-171908859	0	-	171876401	171876401	8553170	6	133,119,138,91,187,151,	0,1609,15065,22602,23512,32307,
#Partially deleted in new
chr5	171899932	172006659	chr5:171899932-172006659	0	-	171996952	172006502	789624	4	168,226,162,202,	0,10639,96957,106525,
#Partially deleted in new
chr5	171899946	172006548	chr5:171899946-172006548	0	-	171899946	172006502	789624	5	154,226,63,102,91,	0,10625,14396,57650,106511,
#Partially deleted in new
chr5	171910630	172006649	chr5:171910630-172006649	0	-	171996952	172006502	789624	5	167,63,102,162,192,	0,3712,46966,86259,95827,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	171910671	171977756	chr5:171910671-171977756	0	-	171910671	171977668	789624	3	126,63,121,	0,3671,66964,
#Partially deleted in new
chr5	171910733	172006569	chr5:171910733-172006569	0	-	171910733	171910733	8553170	3	64,130,112,	0,92447,95724,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr5	172042072	172188386	chr5:172042072-172188386	3	-	172044881	172188042	0	19	2950,114,126,189,125,130,93,180,124,131,549,135,82,195,73,150,49,165,500,	0,10856,12496,13515,15276,19066,22647,40253,40888,48159,51339,54353,63583,64547,65707,75408,85300,114551,145814,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	172043110	172053200	chr5:172043110-172053200	0	-	172043110	172043110	8553170	2	1912,272,	0,9818,
#Partially deleted in new
chr5	172044667	172061168	chr5:172044667-172061168	0	-	172044816	172061168	789624	7	355,55,114,126,189,125,30,	0,758,8261,9901,10920,12681,16471,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	172055721	172061630	chr5:172055721-172061630	0	-	172055721	172055721	8553170	3	55,125,492,	0,1627,5417,
#Partially deleted in new
chr5	172057011	172061195	chr5:172057011-172061195	0	-	172057011	172057011	8553170	2	462,57,	0,4127,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	172057463	172063600	chr5:172057463-172063600	0	-	172057463	172057463	8553170	3	10,395,138,	0,3675,5999,
#Partially deleted in new
chr5	172064364	172082405	chr5:172064364-172082405	0	-	172064364	172064364	8553170	2	448,80,	0,17961,
#Deleted in new
chr5	172092427	172093577	chr5:172092427-172093577	0	-	172092427	172092427	8553170	2	485,166,	0,984,
#Partially deleted in new
chr5	172096437	172108288	chr5:172096437-172108288	0	-	172096437	172096437	8553170	4	123,82,195,509,	0,9218,10182,11342,
#Partially deleted in new
chr5	172105570	172106798	chr5:172105570-172106798	0	-	172105570	172105570	8553170	2	167,179,	0,1049,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	172105657	172114800	chr5:172105657-172114800	0	-	172105657	172105657	8553170	4	80,195,73,204,	0,962,2122,8939,
#Partially deleted in new
chr5	172106661	172156725	chr5:172106661-172156725	0	-	172106661	172106661	8553170	4	153,150,49,102,	0,10819,20711,49962,
#Partially deleted in new
chr5	172106709	172108026	chr5:172106709-172108026	0	-	172106709	172106709	8553170	2	325,247,	0,1070,
#Partially deleted in new
chr5	172106802	172115144	chr5:172106802-172115144	0	-	172106802	172106802	8553170	3	271,73,149,	0,977,8193,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	172106815	172114800	chr5:172106815-172114800	0	-	172106815	172106815	8553170	3	258,73,204,	0,964,7781,
#Partially deleted in new
chr5	172106815	172108061	chr5:172106815-172108061	0	-	172106815	172106815	8553170	2	258,282,	0,964,
#Partially deleted in new
chr5	172194171	172203452	chr5:172194171-172203452	3	+	172194172	172203345	789624	4	137,149,177,239,	0,5211,6394,9042,
#Partially deleted in new
chr5	172209639	172284071	chr5:172209639-172284071	3	-	172211829	172283665	0	3	2588,237,476,	0,24482,73956,
#Deleted in new
chr5	172252333	172252478	chr5:172252333-172252478	3	-	172252333	172252333	8553170	1	145,	0,
#Deleted in new
chr5	172254417	172255439	chr5:172254417-172255439	7	-	172254417	172254417	16724991	1	1022,	0,
#Partially deleted in new
chr5	172324999	172454308	chr5:172324999-172454308	0	-	172325275	172454308	789624	14	381,126,50,227,118,84,105,135,26,92,77,76,81,31,	0,21136,22283,25363,28888,31691,33773,37735,48790,57036,69563,81277,97416,129278,
#Partially deleted in new
chr5	172325180	172454358	chr5:172325180-172454358	1	-	172325275	172454352	789624	13	200,126,50,227,118,105,135,26,92,77,76,81,81,	0,20955,22102,25182,28707,33592,37554,48609,56855,69382,81096,97235,129097,
#Partially deleted in new
chr5	172333498	172454523	chr5:172333498-172454523	3	-	172338368	172454352	789624	13	6418,126,50,227,118,105,135,26,92,77,76,81,246,	0,12637,13784,16864,20389,25274,29236,40291,48537,61064,72778,88917,120779,
#Partially deleted in new
chr5	172333498	172350386	chr5:172333498-172350386	0	-	172333724	172350386	789624	4	271,126,50,24,	0,12637,13784,16864,
#Deleted in new
chr5	172333498	172334235	chr5:172333498-172334235	0	-	172333498	172333498	8553170	2	271,119,	0,618,
#Deleted in new
chr5	172557391	172559014	chr5:172557391-172559014	3	-	172557391	172557391	8553170	3	111,229,76,	0,475,1547,
#Deleted in new
chr5	172609093	172609444	chr5:172609093-172609444	3	-	172609093	172609093	8553170	1	351,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	172641265	172691540	chr5:172641265-172691540	3	+	172641406	172686925	789624	5	172,546,720,126,4860,	0,28519,42153,44905,45415,
#Partially deleted in new
chr5	172641265	172686925	chr5:172641265-172686925	1	+	172641406	172686925	789624	4	172,546,126,245,	0,28519,44905,45415,
#Partially deleted in new
chr5	172641265	172686925	chr5:172641265-172686925	1	+	172641406	172686925	789624	4	172,720,126,245,	0,42153,44905,45415,
#Partially deleted in new
chr5	172656521	172656713	chr5:172656521-172656713	7	-	172656521	172656521	16724991	1	192,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	172662164	172662263	chr5:172662164-172662263	3	+	172662164	172662164	5263520	1	99,	0,
#Partially deleted in new
chr5	172690453	172697720	chr5:172690453-172697720	3	-	172690453	172690453	8553170	2	383,145,	0,7122,
#Partially deleted in new
chr5	172758225	172762556	chr5:172758225-172762556	3	+	172758225	172758225	8553170	3	67,63,342,	0,865,3989,
#Deleted in new
chr5	172762520	172763258	chr5:172762520-172763258	7	-	172762520	172762520	16724991	1	738,	0,
#Partially deleted in new
chr5	172762979	172777774	chr5:172762979-172777774	0	+	172762979	172762979	8553170	2	69,283,	0,14512,
#Deleted in new
chr5	172768089	172771195	chr5:172768089-172771195	3	-	172768761	172770952	0	4	1043,220,146,610,	0,1485,2071,2496,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	172776464	172782334	chr5:172776464-172782334	3	+	172776464	172776464	8553170	3	86,419,263,	0,1027,5607,
#Deleted in new
chr5	172785261	172785424	chr5:172785261-172785424	7	-	172785261	172785261	16724991	1	163,	0,
#Partially deleted in new
chr5	172816620	172819958	chr5:172816620-172819958	3	+	172816620	172816620	8553170	2	105,477,	0,2861,
#Partially deleted in new
chr5	172834274	172952685	chr5:172834274-172952685	3	+	172834413	172950816	789624	10	159,62,73,95,125,105,61,101,123,1977,	0,54424,62727,75392,80439,89730,92234,98161,100913,116434,
#Partially deleted in new
chr5	172834318	172898585	chr5:172834318-172898585	1	+	172834413	172897893	789624	4	115,62,73,750,	0,54380,62683,63517,
#Partially deleted in new
chr5	172834334	172924024	chr5:172834334-172924024	0	+	172834334	172834334	8553170	7	99,62,73,95,125,173,20,	0,54364,62667,75332,80379,81183,89670,
#Partially deleted in new
chr5	172834384	172924061	chr5:172834384-172924061	0	+	172834413	172914726	789624	6	49,62,73,125,173,57,	0,54314,62617,80329,81133,89620,
#Partially deleted in new
chr5	172834410	172920571	chr5:172834410-172920571	1	+	172834413	172920405	789624	6	23,62,73,95,125,208,	0,54288,62591,75256,80303,85953,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	172905216	172924080	chr5:172905216-172924080	0	+	172905454	172924080	789624	4	258,95,125,76,	0,4450,9497,18788,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	172905239	172918335	chr5:172905239-172918335	1	+	172905454	172915078	789624	3	235,95,3622,	0,4427,9474,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	172906059	172926563	chr5:172906059-172926563	0	+	172906059	172906059	8553170	5	121,95,125,105,55,	0,3607,8654,17945,20449,
#Partially deleted in new
chr5	172909666	172932478	chr5:172909666-172932478	0	+	172909666	172914632	789624	5	95,274,105,61,43,	0,4898,14338,16842,22769,
#Partially deleted in new
chr5	172920363	172932536	chr5:172920363-172932536	0	+	172920363	172920363	8553170	5	121,100,105,61,101,	0,1163,3641,6145,12072,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	172922144	172932511	chr5:172922144-172932511	0	+	172922144	172922144	8553170	4	324,105,61,76,	0,1860,4364,10291,
#Partially deleted in new
chr5	172924102	172927099	chr5:172924102-172927099	0	+	172924102	172924102	8553170	3	7,61,388,	0,2406,2609,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	172931092	172938007	chr5:172931092-172938007	0	+	172931092	172931092	8553170	2	115,5572,	0,1343,
#Partially deleted in new
chr5	172933661	172952680	chr5:172933661-172952680	0	+	172933661	172933661	8553170	2	1649,1972,	0,17047,
#Partially deleted in new
chr5	172954906	172957162	chr5:172954906-172957162	3	+	172954906	172954906	8553170	3	139,191,159,	0,746,2097,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	172955153	172959377	chr5:172955153-172959377	3	-	172955153	172955153	8553170	3	875,1104,88,	0,2000,4136,
#Partially deleted in new
chr5	172958728	172969716	chr5:172958728-172969716	3	+	172959873	172969541	789624	4	73,177,141,304,	0,1136,9730,10684,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	172958892	172969721	chr5:172958892-172969721	1	+	172959873	172969541	789624	4	115,177,141,309,	0,972,9566,10520,
#Partially deleted in new
chr5	172959423	172969771	chr5:172959423-172969771	1	+	172959873	172969541	789624	4	45,177,141,359,	0,441,9035,9989,
#Partially deleted in new
chr5	172959459	172969718	chr5:172959459-172969718	1	+	172959873	172969541	789624	4	55,177,141,306,	0,405,8999,9953,
#Deleted in new
chr5	172959519	172959989	chr5:172959519-172959989	0	+	172959873	172959989	789624	2	108,125,	0,345,
#Partially deleted in new
chr5	172959764	172969487	chr5:172959764-172969487	0	+	172959873	172969487	789624	3	277,141,75,	0,8694,9648,
#Partially deleted in new
chr5	172975510	172976374	chr5:172975510-172976374	7	+	172975510	172975510	16724991	1	864,	0,
#Partially deleted in new
chr5	172983756	173035445	chr5:172983756-173035445	3	+	172983860	173020331	789624	4	208,48,130,1047,	0,11018,36481,50642,
#Partially deleted in new
chr5	172983780	173034884	chr5:172983780-173034884	1	+	172983860	173034423	789624	3	184,48,486,	0,10994,50618,
#Partially deleted in new
chr5	172983815	173034892	chr5:172983815-173034892	1	+	172983860	173020331	789624	3	149,130,494,	0,36422,50583,
#Partially deleted in new
chr5	172983830	173020557	chr5:172983830-173020557	1	+	172983860	173020331	789624	3	134,48,320,	0,10944,36407,
#Partially deleted in new
chr5	172986679	172987198	chr5:172986679-172987198	7	+	172986679	172986679	16724991	2	73,109,	0,410,
#Partially deleted in new
chr5	173020727	173020928	chr5:173020727-173020928	3	+	173020727	173020727	789624	1	201,	0,
#Partially deleted in new
chr5	173056351	173139284	chr5:173056351-173139284	3	+	173080775	173133745	789624	9	128,200,126,1087,195,190,74,123,5655,	0,24233,30149,33963,52272,54170,55954,66728,77278,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	173056351	173092330	chr5:173056351-173092330	1	+	173080775	173091433	789624	4	128,196,126,2016,	0,24237,30149,33963,
#Partially deleted in new
chr5	173056367	173091536	chr5:173056367-173091536	1	+	173080775	173091433	789624	4	112,200,126,1222,	0,24217,30133,33947,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	173056389	173124581	chr5:173056389-173124581	0	+	173056389	173056389	8553170	7	90,196,126,1087,2088,74,1502,	0,24199,30111,33925,52234,55916,66690,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	173057343	173060455	chr5:173057343-173060455	0	+	173057343	173057343	8553170	2	340,204,	0,2908,
#Partially deleted in new
chr5	173057393	173086569	chr5:173057393-173086569	0	+	173080775	173086569	789624	3	290,200,69,	0,23191,29107,
#Partially deleted in new
chr5	173085341	173086210	chr5:173085341-173086210	7	-	173085341	173085341	16724991	2	67,486,	0,383,
#Partially deleted in new
chr5	173144161	173145039	chr5:173144161-173145039	3	-	173144161	173144161	8553170	2	416,80,	0,798,
#Partially deleted in new
chr5	173144441	173164340	chr5:173144441-173164340	1	+	173144545	173163921	789624	7	188,93,129,92,102,119,616,	0,2424,7124,9880,14302,15491,19283,
#Partially deleted in new
chr5	173144514	173164387	chr5:173144514-173164387	3	+	173144545	173163921	789624	6	115,93,92,102,119,663,	0,2351,9807,14229,15418,19210,
#Partially deleted in new
chr5	173144536	173164341	chr5:173144536-173164341	1	+	173144545	173163921	789624	6	93,93,129,92,119,617,	0,2329,7029,9785,15396,19188,
#Partially deleted in new
chr5	173144545	173164057	chr5:173144545-173164057	1	+	173144545	173163921	789624	5	84,93,92,119,333,	0,2320,9776,15387,19179,
#Partially deleted in new
chr5	173159975	173161877	chr5:173159975-173161877	0	+	173159975	173160870	789624	2	76,1054,	0,848,
#Deleted in new
chr5	173225835	173226423	chr5:173225835-173226423	7	-	173225835	173225835	16724991	1	588,	0,
#Deleted in new
chr5	173232108	173235357	chr5:173232108-173235357	3	-	173232568	173235083	0	2	1101,608,	0,2641,
#Deleted in new
chr5	173232892	173235264	chr5:173232892-173235264	1	-	173233496	173235083	0	2	609,515,	0,1857,
#Deleted in new
chr5	173232894	173235206	chr5:173232894-173235206	1	-	173233342	173235083	0	2	570,457,	0,1855,
#Deleted in new
chr5	173234047	173235311	chr5:173234047-173235311	0	-	173234047	173235083	789624	2	93,562,	0,702,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	173254189	173254290	chr5:173254189-173254290	3	-	173254189	173254189	8553170	1	101,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	173292516	173292619	chr5:173292516-173292619	7	-	173292516	173292516	16724991	1	103,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	173314712	173329503	chr5:173314712-173329503	3	-	173317846	173328193	789624	4	3537,212,143,1461,	0,8506,11155,13330,
#Deleted in new
chr5	173318177	173324286	chr5:173318177-173324286	0	-	173318177	173318177	8553170	3	72,212,282,	0,5041,5827,
#Deleted in new
chr5	173322968	173328053	chr5:173322968-173328053	0	-	173323214	173328053	789624	3	462,143,11,	0,2899,5074,
#Deleted in new
chr5	173323309	173326797	chr5:173323309-173326797	0	-	173323309	173325906	789624	3	121,143,209,	0,2558,3279,
#Deleted in new
chr5	173325833	173328447	chr5:173325833-173328447	0	-	173325833	173325833	8553170	2	177,405,	0,2209,
#Partially deleted in new
chr5	173347454	173347536	chr5:173347454-173347536	3	+	173347454	173347454	5263520	1	82,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	173362133	173362240	chr5:173362133-173362240	3	-	173362133	173362133	8553170	1	107,	0,
#Partially deleted in new
chr5	173463499	173469881	chr5:173463499-173469881	1	+	173463499	173463499	8553170	3	245,95,413,	0,3754,5969,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	173469681	173484584	chr5:173469681-173484584	3	+	173469681	173469681	8553170	3	36,79,337,	0,7717,14566,
#Partially deleted in new
chr5	173562477	173573199	chr5:173562477-173573199	3	+	173562477	173562477	8553170	3	86,50,319,	0,1017,10403,
#Deleted in new
chr5	173574937	173576275	chr5:173574937-173576275	3	+	173574937	173574937	8553170	2	317,140,	0,1198,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	173579642	173585068	chr5:173579642-173585068	3	+	173579642	173579642	789624	4	40,147,631,959,	0,586,3635,4467,
#Deleted in new
chr5	173579648	173581612	chr5:173579648-173581612	1	+	173579648	173579648	789624	2	34,1384,	0,580,
#Partially deleted in new
chr5	173607513	173616660	chr5:173607513-173616660	3	-	173609238	173616436	789624	4	779,197,125,461,	0,1724,5617,8686,
#Partially deleted in new
chr5	173607520	173616588	chr5:173607520-173616588	1	-	173608264	173616436	789624	3	772,125,389,	0,5610,8679,
#Partially deleted in new
chr5	173607798	173616358	chr5:173607798-173616358	0	-	173609238	173616358	789624	3	494,197,159,	0,1439,8401,
#Partially deleted in new
chr5	173607932	173616653	chr5:173607932-173616653	1	-	173608271	173616436	789624	2	360,454,	0,8267,
#Deleted in new
chr5	173608059	173609740	chr5:173608059-173609740	0	-	173608059	173608059	8553170	2	233,503,	0,1178,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	173609356	173614852	chr5:173609356-173614852	0	-	173609356	173613177	789624	3	78,125,150,	0,3774,5346,
#Partially deleted in new
chr5	173609567	173616659	chr5:173609567-173616659	0	-	173609567	173609567	8553170	3	103,125,460,	0,3563,6632,
#Partially deleted in new
chr5	173642518	173658194	chr5:173642518-173658194	3	+	173642518	173642518	8553170	2	139,355,	0,15321,
#Partially deleted in new
chr5	173689458	173705849	chr5:173689458-173705849	3	+	173689458	173689458	789624	3	95,158,260,	0,12070,16131,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	173710439	173719692	chr5:173710439-173719692	1	-	173710439	173710439	8553170	2	1509,852,	0,8401,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	173786927	173790925	chr5:173786927-173790925	1	-	173786927	173786927	789624	4	320,57,92,117,	0,761,3708,3881,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	173789274	173790942	chr5:173789274-173790942	1	-	173789274	173789274	8553170	3	388,92,134,	0,1361,1534,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	173790458	173807881	chr5:173790458-173807881	3	-	173790458	173790458	8553170	2	466,91,	0,17332,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	173790808	173809039	chr5:173790808-173809039	0	-	173790808	173790808	8553170	2	62,310,	0,17921,
#Partially deleted in new
chr5	173888279	173961976	chr5:173888279-173961976	3	+	173889733	173956137	0	10	2579,82,51,24,174,90,119,115,182,6067,	0,22243,44170,54746,56687,61228,61680,63544,64811,67630,
#Partially deleted in new
chr5	173889339	173960309	chr5:173889339-173960309	1	+	173889733	173956137	0	9	1519,82,24,174,90,119,115,182,4400,	0,21183,53686,55627,60168,60620,62484,63751,66570,
#Partially deleted in new
chr5	173889339	173956235	chr5:173889339-173956235	1	+	173889733	173956137	789624	8	1519,82,174,90,119,115,182,326,	0,21183,55627,60168,60620,62484,63751,66570,
#Partially deleted in new
chr5	173889530	173953439	chr5:173889530-173953439	1	+	173889733	173953305	789624	7	1328,82,174,90,119,115,349,	0,20992,55436,59977,60429,62293,63560,
#Deleted in new
chr5	173890665	173891607	chr5:173890665-173891607	0	+	173890665	173890665	8553170	2	193,236,	0,706,
#Partially deleted in new
chr5	173890673	173910818	chr5:173890673-173910818	0	+	173890673	173890673	8553170	2	185,296,	0,19849,
#Partially deleted in new
chr5	173890676	173945092	chr5:173890676-173945092	0	+	173890676	173945092	789624	4	182,82,51,126,	0,19846,41773,54290,
#Partially deleted in new
chr5	173893050	173956514	chr5:173893050-173956514	1	+	173910543	173956137	789624	9	133,82,51,174,90,119,115,182,605,	0,17472,39399,51916,56457,56909,58773,60040,62859,
#Partially deleted in new
chr5	173893077	173956457	chr5:173893077-173956457	1	+	173910543	173956137	0	8	106,82,174,90,119,115,182,548,	0,17445,51889,56430,56882,58746,60013,62832,
#Partially deleted in new
chr5	173918215	173956514	chr5:173918215-173956514	0	+	173918215	173918215	8553170	8	39,24,174,90,119,115,182,605,	0,24810,26751,31292,31744,33608,34875,37694,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	173973778	174005196	chr5:173973778-174005196	0	+	173973778	173973778	8553170	4	112,124,36,926,	0,11948,27417,30492,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	173989158	174006140	chr5:173989158-174006140	3	+	173989263	174001215	789624	5	430,86,100,36,1870,	0,8994,10541,12037,15112,
#Deleted in new
chr5	174039750	174040240	chr5:174039750-174040240	7	-	174039750	174039750	16724991	1	490,	0,
#Partially deleted in new
chr5	174045603	174109179	chr5:174045603-174109179	3	+	174046755	174107505	789624	5	240,151,84,111,1866,	0,1130,18628,58624,61710,
#Partially deleted in new
chr5	174045705	174107356	chr5:174045705-174107356	0	+	174046755	174066275	789624	6	138,151,84,76,111,43,	0,1028,18526,20498,58522,61608,
#Partially deleted in new
chr5	174045705	174064475	chr5:174045705-174064475	0	+	174045705	174045705	8553170	3	138,151,244,	0,1028,18526,
#Partially deleted in new
chr5	174045714	174107426	chr5:174045714-174107426	0	+	174046755	174107426	789624	5	129,206,84,111,113,	0,964,18517,58513,61599,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	174045743	174243501	chr5:174045743-174243501	1	+	174046755	174205286	789624	5	100,151,84,105,820,	0,990,18488,159456,196938,
#Partially deleted in new
chr5	174046092	174107465	chr5:174046092-174107465	0	+	174046755	174107465	789624	5	70,151,84,111,152,	0,641,18139,58135,61221,
#Partially deleted in new
chr5	174046658	174107505	chr5:174046658-174107505	0	+	174046755	174107502	789624	4	226,84,111,192,	0,17573,57569,60655,
#Deleted in new
chr5	174056059	174056585	chr5:174056059-174056585	3	-	174056059	174056059	8553170	2	202,87,	0,439,
#Partially deleted in new
chr5	174062571	174108447	chr5:174062571-174108447	0	+	174062571	174062571	8553170	4	74,84,111,1134,	0,1660,41656,44742,
#Partially deleted in new
chr5	174081505	174086559	chr5:174081505-174086559	3	-	174081505	174081505	8553170	4	114,209,60,162,	0,913,2593,4892,
#Partially deleted in new
chr5	174081517	174086542	chr5:174081517-174086542	0	-	174081517	174081517	8553170	3	102,209,145,	0,901,4880,
#Partially deleted in new
chr5	174082274	174086475	chr5:174082274-174086475	0	-	174082274	174082274	8553170	2	353,78,	0,4123,
#Partially deleted in new
chr5	174082274	174086618	chr5:174082274-174086618	1	-	174082274	174082274	8553170	3	353,192,221,	0,1824,4123,
#Partially deleted in new
chr5	174091204	174108346	chr5:174091204-174108346	0	+	174091204	174091204	8553170	3	114,111,1033,	0,13023,16109,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	174173100	174181814	chr5:174173100-174181814	3	+	174173100	174173100	8553170	2	223,213,	0,8501,
#Deleted in new
chr5	174329611	174330503	chr5:174329611-174330503	3	+	174329611	174329611	8553170	2	59,499,	0,393,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	174336294	174526448	chr5:174336294-174526448	1	+	174336294	174336294	8553170	5	282,112,147,100,129,	0,91344,181464,187767,190025,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	174336353	174529982	chr5:174336353-174529982	3	+	174336353	174336353	8553170	4	223,112,147,1616,	0,91285,181405,192013,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	174336494	174527139	chr5:174336494-174527139	1	+	174336494	174336494	789624	6	82,112,147,100,221,276,	0,91144,181264,187567,189733,190369,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	174503682	174526380	chr5:174503682-174526380	0	+	174503682	174503682	8553170	3	308,100,153,	0,20379,22545,
#Partially deleted in new
chr5	174503814	174520665	chr5:174503814-174520665	0	+	174503814	174503814	8553170	3	176,147,241,	0,13944,16610,
#Deleted in new
chr5	174513304	174514307	chr5:174513304-174514307	7	+	174513304	174513304	16724991	1	1003,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	174517758	174532457	chr5:174517758-174532457	1	+	174517758	174517758	8553170	4	147,100,74,423,	0,6303,13571,14276,
#Deleted in new
chr5	174561775	174562063	chr5:174561775-174562063	7	+	174561775	174561775	16724991	1	288,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	174618163	174625775	chr5:174618163-174625775	3	+	174618163	174618163	8553170	4	190,264,160,45,	0,2456,3301,7567,
#Deleted in new
chr5	174632931	174633209	chr5:174632931-174633209	7	+	174632931	174632931	16724991	1	278,	0,
#Partially deleted in new
chr5	174724532	174730893	chr5:174724532-174730893	3	+	174724659	174729583	789624	2	506,1735,	0,4626,
#Partially deleted in new
chr5	174724601	174729880	chr5:174724601-174729880	1	+	174724659	174725064	789624	2	466,722,	0,4557,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	174751303	174850725	chr5:174751303-174850725	3	+	174751303	174751303	8553170	4	50,114,34,259,	0,96306,97661,99163,
#Deleted in new
chr5	174751733	174751787	chr5:174751733-174751787	3	+	174751733	174751733	5263520	1	54,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	174820026	174826324	chr5:174820026-174826324	3	+	174820026	174820026	8553170	2	84,203,	0,6095,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	174919081	174995513	chr5:174919081-174995513	3	-	174919081	174919081	789624	3	644,84,1197,	0,57367,75235,
#Partially deleted in new
chr5	174923089	174923945	chr5:174923089-174923945	7	+	174923089	174923089	16724991	1	856,	0,
#Partially deleted in new
chr5	174926540	174926717	chr5:174926540-174926717	7	+	174926540	174926540	16724991	1	177,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	174986294	174987050	chr5:174986294-174987050	3	+	174986294	174986294	8553170	2	112,230,	0,526,
#Deleted in new
chr5	175290730	175291252	chr5:175290730-175291252	7	+	175290730	175290730	16724991	2	147,292,	0,230,
#Deleted in new
chr5	175440038	175444208	chr5:175440038-175444208	3	-	175441758	175443099	0	2	3544,510,	0,3660,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	175477061	175510207	chr5:175477061-175510207	0	+	175492103	175510207	789624	4	129,173,171,99,	0,15033,31970,33047,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	175478394	175529742	chr5:175478394-175529742	3	+	175492103	175526734	789624	11	245,173,171,99,76,86,128,50,50,48,3105,	0,13700,30637,31714,33056,33716,35068,38219,43524,43980,48243,
#Partially deleted in new
chr5	175478563	175509403	chr5:175478563-175509403	0	+	175478563	175478563	8553170	3	76,173,343,	0,13531,30497,
#Partially deleted in new
chr5	175478564	175492546	chr5:175478564-175492546	0	+	175478564	175478564	8553170	2	75,452,	0,13530,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	175478565	175491988	chr5:175478565-175491988	0	+	175478565	175478565	8553170	2	74,495,	0,12928,
#Partially deleted in new
chr5	175478574	175511579	chr5:175478574-175511579	1	+	175492103	175511550	789624	5	65,173,171,99,129,	0,13520,30457,31534,32876,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	175478589	175524103	chr5:175478589-175524103	0	+	175492103	175509067	789624	10	78,173,142,99,76,86,128,50,50,1729,	0,13505,30471,31519,32861,33521,34873,38024,43329,43785,
#Partially deleted in new
chr5	175478590	175510312	chr5:175478590-175510312	0	+	175478590	175478590	8553170	4	49,173,171,204,	0,13504,30441,31518,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	175478591	175512181	chr5:175478591-175512181	0	+	175492103	175512181	789624	7	48,158,173,171,99,76,71,	0,12902,13503,30440,31517,32859,33519,
#Partially deleted in new
chr5	175483594	175484192	chr5:175483594-175484192	7	-	175483594	175483594	16724991	1	598,	0,
#Partially deleted in new
chr5	175492206	175516662	chr5:175492206-175516662	0	+	175492206	175509067	789624	7	61,142,99,76,86,128,49,	0,16854,17902,19244,19904,21256,24407,
#Partially deleted in new
chr5	175511435	175513738	chr5:175511435-175513738	0	+	175511435	175511435	8553170	3	91,86,276,	0,675,2027,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	175521885	175526883	chr5:175521885-175526883	0	+	175521885	175521885	8553170	4	83,48,174,246,	0,489,3906,4752,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	175628187	175628462	chr5:175628187-175628462	3	+	175628187	175628187	8553170	1	275,	0,
#Partially deleted in new
chr5	175658029	175686242	chr5:175658029-175686242	1	+	175683233	175685526	789624	3	126,1601,834,	0,24679,27379,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	175683167	175710725	chr5:175683167-175710725	0	+	175683233	175691239	789624	3	1142,136,2947,	0,8056,24611,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	175683220	175710756	chr5:175683220-175710756	1	+	175683233	175707971	789624	2	1089,2978,	0,24558,
#Deleted in new
chr5	175683233	175684313	chr5:175683233-175684313	3	+	175683233	175684313	789624	1	1080,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	175703897	175704004	chr5:175703897-175704004	3	+	175703897	175703897	8553170	1	107,	0,
#Partially deleted in new
chr5	175796309	175884020	chr5:175796309-175884020	3	+	175878739	175880045	789624	5	475,80,119,176,4173,	0,12679,82342,82598,83538,
#Partially deleted in new
chr5	175796627	175837848	chr5:175796627-175837848	0	+	175796627	175796627	8553170	3	157,80,328,	0,12361,40893,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	175796741	175878759	chr5:175796741-175878759	0	+	175878739	175878759	8553170	5	43,178,80,60,108,	0,8702,12247,12591,81910,
#Partially deleted in new
chr5	175861627	175879973	chr5:175861627-175879973	0	+	175878739	175879973	789624	4	136,119,176,126,	0,17024,17280,18220,
#Deleted in new
chr5	175871497	175880170	chr5:175871497-175880170	1	+	175878739	175880045	789624	4	208,119,176,323,	0,7154,7410,8350,
#Deleted in new
chr5	175871577	175879826	chr5:175871577-175879826	1	+	175878739	175879737	789624	4	128,119,176,95,	0,7074,7330,8154,
#Deleted in new
chr5	175871675	175879998	chr5:175871675-175879998	0	+	175878739	175879998	789624	4	524,119,176,151,	0,6976,7232,8172,
#Deleted in new
chr5	175872809	175879873	chr5:175872809-175879873	0	+	175878739	175879873	789624	4	211,119,176,26,	0,5842,6098,7038,
#Deleted in new
chr5	175878205	175878989	chr5:175878205-175878989	0	+	175878739	175878989	789624	3	366,119,82,	0,446,702,
#Deleted in new
chr5	175878205	175880053	chr5:175878205-175880053	1	+	175878739	175880045	789624	4	75,119,176,206,	0,446,702,1642,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	175903873	175904371	chr5:175903873-175904371	3	-	175903873	175903873	8553170	1	498,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	175906938	175958538	chr5:175906938-175958538	3	-	175906938	175906938	8553170	2	481,87,	0,51513,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	175917872	175961324	chr5:175917872-175961324	0	-	175918098	175961324	789624	3	300,101,52,	0,43178,43400,
#Partially deleted in new
chr5	175926558	175961117	chr5:175926558-175961117	0	-	175926634	175961117	789624	2	183,67,	0,34492,
#Partially deleted in new
chr5	175959526	175968299	chr5:175959526-175968299	3	-	175959968	175968208	789624	6	606,101,162,205,157,358,	0,1524,1746,5424,7584,8415,
#Partially deleted in new
chr5	175959532	175968315	chr5:175959532-175968315	1	-	175965104	175968208	789624	5	600,101,162,205,374,	0,1518,1740,5418,8409,
#Partially deleted in new
chr5	175959590	175961413	chr5:175959590-175961413	0	-	175960104	175961413	789624	2	542,141,	0,1682,
#Partially deleted in new
chr5	175959882	176034680	chr5:175959882-176034680	1	-	175959968	176034639	789624	4	250,101,162,115,	0,1168,1390,74683,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	175960218	175968280	chr5:175960218-175968280	1	-	175960958	175968208	789624	5	933,162,205,157,339,	0,1054,4732,6892,7723,
#Partially deleted in new
chr5	175961050	175967544	chr5:175961050-175967544	0	-	175961050	175961050	8553170	5	101,162,205,157,74,	0,222,3900,6060,6420,
#Partially deleted in new
chr5	175961080	176034612	chr5:175961080-176034612	0	-	175967146	176034612	789624	5	71,162,205,157,47,	0,192,3870,6030,73485,
#Partially deleted in new
chr5	175961141	175965268	chr5:175961141-175965268	0	-	175961141	175961141	8553170	3	10,162,318,	0,131,3809,
#Partially deleted in new
chr5	175961364	175968268	chr5:175961364-175968268	0	-	175965104	175968208	789624	3	70,205,327,	0,3586,6577,
#Partially deleted in new
chr5	175961419	176034606	chr5:175961419-176034606	0	-	176011098	176034606	789624	6	15,205,157,140,91,41,	0,3531,5691,45582,49589,73146,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	175972614	175985856	chr5:175972614-175985856	3	+	175972614	175972614	8553170	2	338,209,	0,13033,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	175972621	175979236	chr5:175972621-175979236	0	+	175972621	175972621	8553170	2	331,70,	0,6545,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	176006144	176007387	chr5:176006144-176007387	7	+	176006144	176006144	16724991	2	264,667,	0,576,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	176040743	176042878	chr5:176040743-176042878	3	+	176040743	176040743	8553170	2	104,580,	0,1555,
#Partially deleted in new
chr5	176049677	176062021	chr5:176049677-176062021	3	-	176049677	176049677	789624	3	1055,134,327,	0,10554,12017,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr5	176060688	176115867	chr5:176060688-176115867	3	+	176089518	176114049	789624	23	115,56,194,59,25,80,25,77,25,71,25,71,31,71,25,71,31,71,31,38,68,106,275,	0,3020,13947,28774,29681,32506,33055,36135,36666,37799,38332,40358,40862,42538,43067,45370,45871,47916,48418,52652,53111,53267,54904,
#Partially deleted in new
chr5	176060722	176075219	chr5:176060722-176075219	0	+	176060722	176060722	8553170	3	81,56,584,	0,2986,13913,
#Partially deleted in new
chr5	176061121	176090439	chr5:176061121-176090439	0	+	176061121	176061121	8553170	6	147,56,31,194,59,70,	0,2587,9845,13514,28341,29248,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	176061254	176116015	chr5:176061254-176116015	1	+	176089518	176114049	789624	12	89,56,59,25,80,25,71,31,38,68,106,423,	0,2454,28208,29115,31940,42501,44804,45305,52086,52545,52701,54338,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	176062534	176064718	chr5:176062534-176064718	0	+	176062534	176062534	8553170	3	100,56,221,	0,1174,1963,
#Partially deleted in new
chr5	176063367	176114211	chr5:176063367-176114211	1	+	176089518	176114049	789624	10	397,59,25,80,25,71,31,38,68,256,	0,26095,27002,29827,40388,42691,43192,49973,50432,50588,
#Partially deleted in new
chr5	176063536	176114798	chr5:176063536-176114798	1	+	176089518	176114049	789624	20	228,59,25,80,25,77,25,71,25,71,31,71,25,71,31,71,31,38,68,843,	0,25926,26833,29658,30207,33287,33818,34951,35484,37510,38014,39690,40219,42522,43023,45068,45570,49804,50263,50419,
#Partially deleted in new
chr5	176063708	176090796	chr5:176063708-176090796	0	+	176063708	176063708	8553170	3	56,59,427,	0,25754,26661,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr5	176063747	176126959	chr5:176063747-176126959	3	+	176089518	176114049	789624	27	17,59,25,80,25,77,25,71,25,71,31,71,25,71,31,71,31,38,68,106,660,155,187,134,70,170,1940,	0,25715,26622,29447,29996,33076,33607,34740,35273,37299,37803,39479,40008,42311,42812,44857,45359,49593,50052,50208,51845,55797,56067,57099,57997,60515,61272,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr5	176084845	176109589	chr5:176084845-176109589	0	+	176084845	176084845	8553170	18	148,144,59,25,80,25,77,25,71,25,71,31,71,25,71,31,71,483,	0,2266,4617,5524,8349,8898,11978,12509,13642,14175,16201,16705,18381,18910,21213,21714,23759,24261,
#Partially deleted in new
chr5	176084855	176101581	chr5:176084855-176101581	0	+	176093199	176101581	789624	10	138,59,80,25,77,25,71,25,71,31,	0,4607,8339,8888,11968,12499,13632,14165,16191,16695,
#Partially deleted in new
chr5	176084905	176097965	chr5:176084905-176097965	0	+	176084905	176084905	8553170	8	88,59,25,80,25,77,25,166,	0,4557,5464,8289,8838,11918,12449,12894,
#Partially deleted in new
chr5	176084905	176090610	chr5:176084905-176090610	0	+	176084905	176084905	8553170	4	88,144,59,241,	0,2206,4557,5464,
#Partially deleted in new
chr5	176084905	176090709	chr5:176084905-176090709	0	+	176084905	176084905	8553170	4	88,94,59,340,	0,2206,4557,5464,
#Partially deleted in new
chr5	176084962	176114798	chr5:176084962-176114798	1	+	176084962	176114049	789624	21	31,144,59,25,80,25,77,25,71,25,71,31,71,25,71,31,71,31,38,68,843,	0,2149,4500,5407,8232,8781,11861,12392,13525,14058,16084,16588,18264,18793,21096,21597,23642,24144,28378,28837,28993,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	176113151	176115778	chr5:176113151-176115778	0	+	176113151	176113151	8553170	4	227,68,106,186,	0,648,804,2441,
#Deleted in new
chr5	176119544	176121148	chr5:176119544-176121148	5	+	176119544	176119544	16724991	4	155,187,134,84,	0,270,1302,1520,
#Partially deleted in new
chr5	176119559	176125165	chr5:176119559-176125165	4	+	176119559	176119559	16724991	7	140,187,134,70,109,170,146,	0,255,1287,2185,4437,4703,5460,
#Partially deleted in new
chr5	176119576	176156937	chr5:176119576-176156937	5	+	176119576	176119576	16724991	9	123,134,70,124,170,118,166,143,379,	0,1270,2168,4420,4686,17584,35676,35989,36982,
#Partially deleted in new
chr5	176119645	176121814	chr5:176119645-176121814	4	+	176119645	176119645	16724991	3	54,134,70,	0,1201,2099,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	176120889	176132258	chr5:176120889-176132258	6	+	176120889	176120889	16724991	5	91,70,124,170,2173,	0,855,3107,3373,9196,
#Partially deleted in new
chr5	176123833	176125138	chr5:176123833-176125138	4	+	176123833	176123833	16724991	3	287,170,119,	0,429,1186,
#Partially deleted in new
chr5	176124005	176125203	chr5:176124005-176125203	5	+	176124005	176124005	16724991	3	115,100,186,	0,282,1012,
#Partially deleted in new
chr5	176124209	176131461	chr5:176124209-176131461	3	-	176124209	176124209	8553170	2	174,180,	0,7072,
#Partially deleted in new
chr5	176137156	176155738	chr5:176137156-176155738	4	+	176137156	176137156	16724991	5	122,369,90,166,173,	0,16985,17636,18096,18409,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr5	176143084	176185155	chr5:176143084-176185155	3	-	176143084	176143084	5263520	23	542,171,119,140,28,185,125,882,128,333,55,111,58,87,65,68,169,65,25,71,79,71,55,	0,1940,3004,3881,4454,4601,4929,11666,13777,15779,24578,28668,30421,31889,32063,32749,33197,33674,37239,37731,39600,40146,42016,
#Partially deleted in new
chr5	176145024	176156989	chr5:176145024-176156989	7	-	176145024	176145024	16724991	11	171,119,93,140,28,185,125,73,133,882,128,	0,1064,1746,1941,2514,2661,2989,6982,8678,9726,11837,
#Partially deleted in new
chr5	176158610	176168038	chr5:176158610-176168038	0	-	176158610	176158610	8553170	2	586,376,	0,9052,
#Partially deleted in new
chr5	176173344	176199295	chr5:176173344-176199295	3	-	176173344	176173344	8553170	13	219,65,68,169,65,25,71,144,71,242,219,194,60,	0,1803,2489,2937,3414,6979,7471,9275,9886,11756,12817,14058,25891,
#Deleted in new
chr5	176173352	176175393	chr5:176173352-176175393	1	-	176173352	176173352	8553170	3	211,87,246,	0,1621,1795,
#Partially deleted in new
chr5	176176519	176185180	chr5:176176519-176185180	0	-	176176519	176176519	8553170	4	304,79,71,80,	0,6165,6711,8581,
#Partially deleted in new
chr5	176180006	176185156	chr5:176180006-176185156	0	-	176180006	176180006	8553170	4	342,71,79,56,	0,809,2678,5094,
#Deleted in new
chr5	176203313	176203710	chr5:176203313-176203710	7	-	176203313	176203313	16724991	1	397,	0,
#Partially deleted in new
chr5	176238366	176345985	chr5:176238366-176345985	1	+	176238508	176345445	789624	9	271,233,70,155,153,129,157,85,803,	0,56663,57884,75324,83906,86262,98353,98695,106816,
#Partially deleted in new
chr5	176238366	176345989	chr5:176238366-176345989	3	+	176238508	176345445	789624	10	271,233,70,155,153,129,157,85,384,288,	0,56663,57884,75324,83906,86262,98353,98695,106816,107335,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	176238366	176345991	chr5:176238366-176345991	1	+	176263430	176345445	789624	12	271,122,86,1302,233,70,155,153,129,157,85,809,	0,22661,25050,51287,56663,57884,75324,83906,86262,98353,98695,106816,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	176238381	176296674	chr5:176238381-176296674	0	+	176238381	176238381	8553170	3	256,233,424,	0,56648,57869,
#Partially deleted in new
chr5	176238452	176289799	chr5:176238452-176289799	0	+	176238452	176238452	8553170	3	185,130,146,	0,31938,51201,
#Partially deleted in new
chr5	176238490	176345445	chr5:176238490-176345445	1	+	176238508	176345445	789624	10	147,1302,233,70,155,153,129,157,85,263,	0,51163,56539,57760,75200,83782,86138,98229,98571,106692,
#Partially deleted in new
chr5	176238506	176296322	chr5:176238506-176296322	0	+	176238506	176238506	8553170	4	131,48,113,72,	0,56523,56643,57744,
#Partially deleted in new
chr5	176238655	176289954	chr5:176238655-176289954	0	+	176238655	176238655	8553170	2	396,301,	0,50998,
#Partially deleted in new
chr5	176270229	176290209	chr5:176270229-176290209	0	+	176270229	176270229	8553170	2	291,556,	0,19424,
#Partially deleted in new
chr5	176296122	176322815	chr5:176296122-176322815	0	+	176296122	176296122	8553170	3	198,155,543,	0,17568,26150,
#Deleted in new
chr5	176308062	176309013	chr5:176308062-176309013	7	+	176308062	176308062	16724991	1	951,	0,
#Partially deleted in new
chr5	176313079	176345989	chr5:176313079-176345989	1	+	176313424	176345445	789624	7	405,155,153,129,157,85,807,	0,611,9193,11549,23640,23982,32103,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	176346060	176361968	chr5:176346060-176361968	3	-	176347599	176359508	789624	9	1748,143,107,125,127,179,87,108,367,	0,1860,2189,4552,6561,9510,13420,13750,15541,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	176346061	176361765	chr5:176346061-176361765	1	-	176347599	176355720	789624	8	1747,143,107,125,127,179,108,164,	0,1859,2188,4551,6560,9509,13749,15540,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	176346061	176361739	chr5:176346061-176361739	0	-	176346061	176346061	789624	5	1747,143,107,108,138,	0,1859,2188,13749,15540,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	176346064	176361807	chr5:176346064-176361807	1	-	176347599	176355720	789624	7	1744,143,107,125,127,179,206,	0,1856,2185,4548,6557,9506,15537,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	176346064	176361807	chr5:176346064-176361807	1	-	176347599	176352712	789624	6	1744,143,107,125,127,206,	0,1856,2185,4548,6557,15537,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	176347493	176361761	chr5:176347493-176361761	1	-	176347599	176359508	789624	8	315,143,107,125,127,179,87,160,	0,427,756,3119,5128,8077,11987,14108,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	176347940	176353584	chr5:176347940-176353584	3	+	176347940	176347940	8553170	3	88,86,330,	0,1043,5314,
#Partially deleted in new
chr5	176347968	176361764	chr5:176347968-176361764	1	-	176348261	176359508	789624	5	95,107,87,108,163,	0,281,11512,11842,13633,
#Partially deleted in new
chr5	176350727	176361797	chr5:176350727-176361797	0	-	176350727	176355720	789624	4	10,127,179,196,	0,1894,4843,10874,
#Partially deleted in new
chr5	176352688	176361787	chr5:176352688-176361787	0	-	176352688	176355720	789624	5	60,179,106,108,186,	0,2882,6773,7122,8913,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	176353195	176361735	chr5:176353195-176361735	0	-	176353195	176353195	8553170	5	233,179,87,108,134,	0,2375,6285,6615,8406,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	176354205	176356168	chr5:176354205-176356168	3	+	176354205	176354205	8553170	2	356,172,	0,1791,
#Partially deleted in new
chr5	176359519	176361764	chr5:176359519-176361764	0	-	176359519	176359519	8553170	2	399,163,	0,2082,
#Partially deleted in new
chr5	176359524	176361562	chr5:176359524-176361562	0	-	176359524	176359524	8553170	3	43,108,389,	0,286,1649,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	176365467	176381909	chr5:176365467-176381909	3	+	176365563	176371895	789624	4	279,202,176,10188,	0,912,3339,6254,
#Partially deleted in new
chr5	176366537	176369127	chr5:176366537-176369127	0	+	176366537	176366537	8553170	2	44,321,	0,2269,
#Partially deleted in new
chr5	176367945	176368031	chr5:176367945-176368031	3	+	176367945	176367945	5263520	1	86,	0,
#Partially deleted in new
chr5	176368849	176401865	chr5:176368849-176401865	0	+	176368849	176401752	789624	2	133,125,	0,32891,
#Partially deleted in new
chr5	176368946	176388638	chr5:176368946-176388638	0	+	176368946	176388498	789624	2	36,344,	0,19348,
#Partially deleted in new
chr5	176383937	176388762	chr5:176383937-176388762	1	-	176383963	176388539	789624	6	161,186,107,70,109,330,	0,163,1283,2902,4297,4495,
#Partially deleted in new
chr5	176383945	176388975	chr5:176383945-176388975	3	-	176384230	176388539	789624	5	429,107,70,109,543,	0,1275,2894,4289,4487,
#Partially deleted in new
chr5	176383945	176388762	chr5:176383945-176388762	1	-	176383980	176388539	789624	5	338,107,70,109,330,	0,1275,2894,4289,4487,
#Partially deleted in new
chr5	176383957	176388575	chr5:176383957-176388575	1	-	176384180	176388539	789624	2	329,143,	0,4475,
#Partially deleted in new
chr5	176383980	176388927	chr5:176383980-176388927	1	-	176383980	176388539	789624	5	306,107,70,109,495,	0,1240,2859,4254,4452,
#Partially deleted in new
chr5	176384207	176388587	chr5:176384207-176388587	0	-	176386871	176388539	789624	5	76,107,104,109,155,	0,1013,2632,4027,4225,
#Partially deleted in new
chr5	176384333	176388598	chr5:176384333-176388598	0	-	176384333	176384333	8553170	4	41,107,70,364,	0,887,2506,3901,
#Partially deleted in new
chr5	176384361	176388571	chr5:176384361-176388571	0	-	176384361	176384361	8553170	4	13,107,87,337,	0,859,2478,3873,
#Partially deleted in new
chr5	176384642	176388568	chr5:176384642-176388568	1	-	176385160	176388539	789624	4	685,70,109,136,	0,2197,3592,3790,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	176385940	176388598	chr5:176385940-176388598	0	-	176385940	176385940	8553170	3	79,70,364,	0,899,2294,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	176386023	176388598	chr5:176386023-176388598	0	-	176386023	176386023	8553170	3	886,109,166,	0,2211,2409,
#Deleted in new
chr5	176388746	176389771	chr5:176388746-176389771	3	+	176388819	176389497	789624	2	227,441,	0,584,
#Partially deleted in new
chr5	176392454	176416569	chr5:176392454-176416569	3	-	176392773	176416363	789624	6	491,54,112,118,47,393,	0,4024,5152,5475,17802,23722,
#Partially deleted in new
chr5	176392454	176416569	chr5:176392454-176416569	1	-	176392773	176416363	789624	5	491,112,118,47,393,	0,5152,5475,17802,23722,
#Partially deleted in new
chr5	176392641	176416261	chr5:176392641-176416261	0	-	176392922	176416261	789624	4	291,104,47,85,	0,5302,17615,23535,
#Partially deleted in new
chr5	176392648	176416539	chr5:176392648-176416539	0	-	176406537	176416363	789624	6	297,112,118,552,47,363,	0,4958,5281,13508,17608,23528,
#Partially deleted in new
chr5	176392792	176416538	chr5:176392792-176416538	0	-	176392792	176416363	789624	3	143,47,362,	0,17464,23384,
#Deleted in new
chr5	176405589	176406340	chr5:176405589-176406340	0	-	176405589	176405589	8553170	2	233,184,	0,567,
#Deleted in new
chr5	176439089	176439238	chr5:176439089-176439238	3	+	176439089	176439089	8553170	1	149,	0,
#Partially deleted in new
chr5	176447627	176486427	chr5:176447627-176486427	0	+	176448166	176486427	789624	3	542,69,73,	0,31560,38727,
#Partially deleted in new
chr5	176448354	176510074	chr5:176448354-176510074	3	+	176448407	176506950	0	11	116,69,135,77,139,86,92,178,172,144,3307,	0,30833,38000,40596,43839,45644,45829,48131,50559,51648,58413,
#Partially deleted in new
chr5	176448428	176453559	chr5:176448428-176453559	0	+	176448428	176448428	8553170	3	42,53,242,	0,4747,4889,
#Partially deleted in new
chr5	176453138	176489027	chr5:176453138-176489027	0	+	176453138	176453138	8553170	5	90,385,69,135,77,	0,179,26049,33216,35812,
#Partially deleted in new
chr5	176492238	176498977	chr5:176492238-176498977	0	+	176492238	176492238	8553170	4	94,277,178,64,	0,1760,4247,6675,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	176494021	176496986	chr5:176494021-176496986	0	+	176494021	176494021	8553170	3	63,92,501,	0,162,2464,
#Partially deleted in new
chr5	176526696	176537420	chr5:176526696-176537420	3	-	176529027	176532472	789624	11	2394,100,122,88,125,162,174,168,190,151,481,	0,2591,2826,3034,3385,3885,4151,4766,5307,5669,10243,
#Deleted in new
chr5	176528938	176530645	chr5:176528938-176530645	0	-	176529107	176530645	789624	5	449,122,88,125,64,	0,584,792,1143,1643,
#Partially deleted in new
chr5	176528957	176538025	chr5:176528957-176538025	0	-	176532098	176532472	789624	11	133,100,122,88,125,162,174,168,129,151,295,	0,330,565,773,1124,1624,1890,2505,3046,3408,8773,
#Deleted in new
chr5	176529077	176529808	chr5:176529077-176529808	0	-	176529077	176529077	8553170	2	310,286,	0,445,
#Deleted in new
chr5	176529487	176530610	chr5:176529487-176530610	0	-	176529487	176529487	8553170	3	157,476,29,	0,243,1094,
#Partially deleted in new
chr5	176530936	176537296	chr5:176530936-176537296	0	-	176532098	176532472	789624	5	85,168,126,151,357,	0,526,1067,1429,6003,
#Partially deleted in new
chr5	176531881	176537880	chr5:176531881-176537880	0	-	176531881	176531881	8553170	2	635,150,	0,5849,
#Partially deleted in new
chr5	176532479	176536330	chr5:176532479-176536330	0	-	176532479	176532479	8553170	2	37,335,	0,3516,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr5	176542510	176595974	chr5:176542510-176595974	3	+	176565352	176595672	0	32	259,67,72,140,51,90,90,126,147,76,116,234,156,162,62,244,240,70,606,72,50,152,109,89,69,78,61,125,114,81,58,443,	0,22827,23161,26167,26449,28702,31572,32573,32769,32995,33213,33441,34888,35126,35523,35854,38832,41679,41899,43443,44282,46520,46819,47017,47567,47742,47914,48052,48699,48893,50212,53021,
#Partially deleted in new
chr5	176543540	176568767	chr5:176543540-176568767	0	+	176565352	176567010	789624	5	177,67,72,169,90,	0,21797,22131,23405,25137,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	176547432	176547726	chr5:176547432-176547726	3	-	176547432	176547432	8553170	1	294,	0,
#Partially deleted in new
chr5	176549390	176595768	chr5:176549390-176595768	1	+	176565352	176595672	0	32	24,67,72,140,51,90,90,126,147,76,116,234,156,162,62,244,240,70,606,72,50,152,109,89,69,78,61,125,114,81,58,237,	0,15947,16281,19287,19569,21822,24692,25693,25889,26115,26333,26561,28008,28246,28643,28974,31952,34799,35019,36563,37402,39640,39939,40137,40687,40862,41034,41172,41819,42013,43332,46141,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	176556703	176556805	chr5:176556703-176556805	3	+	176556703	176556703	8553170	1	102,	0,
#Partially deleted in new
chr5	176565305	176595697	chr5:176565305-176595697	1	+	176565352	176595672	0	31	99,72,140,51,90,90,126,147,76,116,234,156,162,62,244,240,70,606,72,50,152,109,89,69,78,61,125,114,81,58,166,	0,366,3372,3654,5907,8777,9778,9974,10200,10418,10646,12093,12331,12728,13059,16037,18884,19104,20648,21487,23725,24024,24222,24772,24947,25119,25257,25904,26098,27417,30226,
#Partially deleted in new
chr5	176586650	176590661	chr5:176586650-176590661	0	+	176586650	176586650	8553170	8	192,152,109,89,69,78,61,99,	0,2380,2679,2877,3427,3602,3774,3912,
#Partially deleted in new
chr5	176586658	176589570	chr5:176586658-176589570	0	+	176586658	176586658	8553170	3	184,152,241,	0,2372,2671,
#Deleted in new
chr5	176590600	176591690	chr5:176590600-176591690	0	+	176590600	176590600	8553170	3	87,114,287,	0,609,803,
#Partially deleted in new
chr5	176595801	176610133	chr5:176595801-176610133	3	-	176596807	176599834	789624	2	4076,135,	0,14197,
#Partially deleted in new
chr5	176620083	176630364	chr5:176620083-176630364	1	-	176620810	176629654	789624	7	760,90,119,42,130,157,85,	0,1130,6314,6636,9450,9725,10196,
#Partially deleted in new
chr5	176620209	176630556	chr5:176620209-176630556	1	-	176620810	176629654	789624	6	634,90,119,130,157,277,	0,1004,6188,9324,9599,10070,
#Partially deleted in new
chr5	176620240	176630529	chr5:176620240-176630529	3	-	176620810	176629654	789624	6	603,90,119,42,130,250,	0,973,6157,6479,9293,10039,
#Partially deleted in new
chr5	176620680	176629994	chr5:176620680-176629994	1	-	176620810	176629654	789624	6	163,90,119,42,130,186,	0,533,5717,6039,8853,9128,
#Partially deleted in new
chr5	176620784	176630000	chr5:176620784-176630000	1	-	176620810	176629654	789624	6	59,90,119,42,130,112,	0,429,5613,5935,8749,9104,
#Partially deleted in new
chr5	176621213	176630048	chr5:176621213-176630048	0	-	176621213	176621213	8553170	3	90,364,515,	0,5184,8320,
#Deleted in new
chr5	176629438	176629500	chr5:176629438-176629500	3	-	176629438	176629438	5263520	1	62,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	176630617	176646595	chr5:176630617-176646595	3	+	176642787	176645980	8553170	10	434,146,135,93,185,96,64,114,140,730,	0,6708,11425,12092,12464,13021,13758,14512,14759,15248,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	176630681	176646641	chr5:176630681-176646641	1	+	176642787	176645980	789624	9	383,123,93,185,96,64,114,140,776,	0,11361,12028,12400,12957,13694,14448,14695,15184,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	176630681	176642737	chr5:176630681-176642737	0	+	176630681	176630681	8553170	3	370,135,28,	0,11361,12028,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	176630954	176643708	chr5:176630954-176643708	0	+	176642787	176643708	789624	5	110,123,93,185,70,	0,11088,11755,12127,12684,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	176630954	176646641	chr5:176630954-176646641	0	+	176630954	176630954	8553170	6	110,135,93,185,801,1512,	0,11088,11755,12127,12684,14175,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	176641671	176646607	chr5:176641671-176646607	1	+	176642787	176645980	789624	9	107,135,93,185,96,64,114,140,742,	0,371,1038,1410,1967,2704,3458,3705,4194,
#Deleted in new
chr5	176642927	176645300	chr5:176642927-176645300	0	+	176642927	176642927	8553170	5	48,185,96,64,171,	0,154,711,1448,2202,
#Deleted in new
chr5	176643244	176645981	chr5:176643244-176645981	0	+	176643244	176645981	789624	6	22,96,64,114,102,116,	0,394,1131,1885,2170,2621,
#Deleted in new
chr5	176644579	176646140	chr5:176644579-176646140	0	+	176644579	176644579	8553170	4	32,114,140,275,	0,550,797,1286,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	176647386	176659020	chr5:176647386-176659020	3	+	176647615	176657698	789624	9	316,51,147,171,126,57,117,62,1503,	0,4229,4367,5356,7508,8691,9313,9508,10131,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	176647466	176659054	chr5:176647466-176659054	1	+	176647615	176656960	789624	4	236,171,48,2355,	0,5276,8611,9233,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	176647496	176659053	chr5:176647496-176659053	0	+	176647496	176647496	8553170	8	206,51,147,2278,48,117,62,1536,	0,4119,4257,5246,8581,9203,9398,10021,
#Partially deleted in new
chr5	176647501	176657618	chr5:176647501-176657618	0	+	176647615	176651781	789624	8	212,51,147,171,48,117,62,101,	0,4114,4252,5241,8576,9198,9393,10016,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	176647501	176659051	chr5:176647501-176659051	1	+	176647615	176657698	789624	9	201,51,147,171,126,48,117,62,1534,	0,4114,4252,5241,7393,8576,9198,9393,10016,
#Partially deleted in new
chr5	176647504	176656956	chr5:176647504-176656956	0	+	176647615	176656956	789624	8	198,51,147,135,126,48,117,62,	0,4111,4249,5274,7390,8573,9195,9390,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	176647560	176657732	chr5:176647560-176657732	1	+	176647615	176657698	789624	9	142,51,147,102,126,57,117,62,215,	0,4055,4193,5251,7334,8517,9139,9334,9957,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	176647567	176659053	chr5:176647567-176659053	1	+	176647615	176657532	789624	9	135,51,147,171,126,48,117,30,1536,	0,4048,4186,5175,7327,8510,9132,9327,9950,
#Partially deleted in new
chr5	176647619	176657056	chr5:176647619-176657056	0	+	176647619	176656960	789624	6	83,171,126,48,117,162,	0,5123,7275,8458,9080,9275,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	176707355	176726243	chr5:176707355-176726243	3	-	176707355	176707355	8553170	2	359,219,	0,18669,
#Partially deleted in new
chr5	176726941	176739458	chr5:176726941-176739458	3	-	176726941	176726941	8553170	4	134,283,73,63,	0,1510,2058,12454,
#Deleted in new
chr5	176743204	176743871	chr5:176743204-176743871	3	+	176743204	176743204	789624	2	238,322,	0,345,
#Partially deleted in new
chr5	176810476	176880895	chr5:176810476-176880895	3	+	176810750	176879886	0	15	344,222,144,104,181,165,189,303,88,169,234,150,165,179,1175,	0,52147,57653,58084,58307,59893,63491,63787,66715,67058,67417,67767,67998,68833,69244,
#Partially deleted in new
chr5	176810518	176880898	chr5:176810518-176880898	1	+	176810750	176879886	789624	16	302,222,144,104,181,168,165,189,303,88,169,234,150,165,179,1178,	0,52105,57611,58042,58265,59095,59851,63449,63745,66673,67016,67375,67725,67956,68791,69202,
#Partially deleted in new
chr5	176862623	176874400	chr5:176862623-176874400	0	+	176862623	176864847	789624	9	222,166,210,144,104,181,165,189,137,	0,2192,2888,5506,5937,6160,7746,11344,11640,
#Partially deleted in new
chr5	176880868	176888647	chr5:176880868-176888647	0	-	176880868	176880868	8553170	10	349,234,156,184,100,96,120,137,296,316,	0,433,823,1075,2901,3170,6133,6332,6582,7463,
#Partially deleted in new
chr5	176880870	176899332	chr5:176880870-176899332	3	-	176881072	176896159	0	19	347,234,156,184,100,96,120,137,296,234,156,184,100,96,120,155,163,122,66,	0,431,821,1073,2899,3168,6131,6330,6580,7461,7838,8510,8774,9764,9951,10166,10517,15193,18396,
#Deleted in new
chr5	176881301	176881872	chr5:176881301-176881872	0	-	176881301	176881301	8553170	2	234,181,	0,390,
#Partially deleted in new
chr5	176881955	176884134	chr5:176881955-176884134	0	-	176881955	176884134	789624	3	199,100,96,	0,1814,2083,
#Deleted in new
chr5	176887065	176891538	chr5:176887065-176891538	0	-	176891109	176891538	789624	3	56,243,151,	0,3971,4322,
#Deleted in new
chr5	176889660	176891391	chr5:176889660-176891391	0	-	176891109	176891391	789624	5	84,96,120,243,4,	0,974,1161,1376,1727,
#Partially deleted in new
chr5	176905004	177006408	chr5:176905004-177006408	1	-	176905281	176982615	0	15	488,37,64,172,79,154,104,77,62,737,106,125,85,155,125,	0,1006,2109,3518,6306,38330,46469,50954,53088,63550,64596,65737,70391,77464,101279,
#Partially deleted in new
chr5	176905049	177006581	chr5:176905049-177006581	1	-	176905281	176982615	0	15	443,37,64,172,79,154,104,77,62,239,106,125,85,155,43,	0,961,2064,3473,6261,38285,46424,50909,53043,64003,64551,65692,70346,77419,101489,
#Partially deleted in new
chr5	176905049	177006751	chr5:176905049-177006751	3	-	176905281	176982615	0	15	443,37,64,172,79,154,104,77,62,737,106,125,85,155,102,	0,961,2064,3473,6261,38285,46424,50909,53043,63505,64551,65692,70346,77419,101600,
#Partially deleted in new
chr5	176905052	177006715	chr5:176905052-177006715	0	-	176969257	176982615	789624	15	440,37,64,172,79,154,104,77,62,737,110,125,85,155,66,	0,958,2061,3470,6258,38282,46421,50906,53040,63502,64544,65689,70343,77416,101597,
#Partially deleted in new
chr5	176905065	176970793	chr5:176905065-176970793	1	-	176905281	176969690	0	11	427,37,64,172,79,154,104,77,62,106,52,	0,945,2048,3457,6245,38269,46408,50893,53027,64535,65676,
#Deleted in new
chr5	176905192	176906176	chr5:176905192-176906176	0	-	176905192	176905192	8553170	2	300,166,	0,818,
#Deleted in new
chr5	176905657	176907307	chr5:176905657-176907307	0	-	176905657	176905657	8553170	2	390,194,	0,1456,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	176908632	176968889	chr5:176908632-176968889	0	-	176908632	176908632	8553170	8	62,79,82,154,104,77,62,335,	0,2678,10537,34702,42841,47326,49460,59922,
#Partially deleted in new
chr5	176969282	177022602	chr5:176969282-177022602	0	-	176969282	176982615	789624	6	9,106,125,85,155,139,	0,318,1459,6113,13186,53181,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	176969940	177006365	chr5:176969940-177006365	0	-	176969940	176969940	8553170	4	926,85,155,82,	0,5455,12528,36343,
#Partially deleted in new
chr5	176970689	177022633	chr5:176970689-177022633	0	-	176970689	176970689	8553170	4	177,85,155,170,	0,4706,11779,51774,
#Partially deleted in new
chr5	176970831	177006714	chr5:176970831-177006714	0	-	176970831	176982615	789624	5	35,85,155,85,65,	0,4564,11637,30585,35818,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	176975415	176980276	chr5:176975415-176980276	0	-	176975415	176975415	8553170	2	65,156,	0,4705,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	176982520	177006570	chr5:176982520-177006570	0	-	176982520	176982615	789624	3	103,114,32,	0,19477,24018,
#Partially deleted in new
chr5	177022695	177065985	chr5:177022695-177065985	3	+	177022738	177064599	0	7	218,104,93,145,186,94,1474,	0,18430,19082,21693,28055,39362,41816,
#Partially deleted in new
chr5	177022695	177065241	chr5:177022695-177065241	1	+	177022738	177064599	789624	4	218,234,94,730,	0,28007,39362,41816,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	177022695	177080554	chr5:177022695-177080554	1	+	177022738	177064599	789624	4	218,94,90,1173,	0,39362,41816,56686,
#Partially deleted in new
chr5	177022703	177064966	chr5:177022703-177064966	1	+	177022738	177064599	0	6	210,104,142,186,94,455,	0,18422,21688,28047,39354,41808,
#Partially deleted in new
chr5	177022715	177065458	chr5:177022715-177065458	0	+	177022738	177050774	789624	6	198,104,93,186,94,947,	0,18410,19062,28035,39342,41796,
#Partially deleted in new
chr5	177022731	177065965	chr5:177022731-177065965	1	+	177022738	177064599	789624	7	182,104,93,145,234,94,1454,	0,18394,19046,21657,27971,39326,41780,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	177022734	177081189	chr5:177022734-177081189	1	+	177022738	177064599	0	9	179,75,104,93,145,186,94,90,1808,	0,425,18391,19043,21654,28016,39323,41777,56647,
#Partially deleted in new
chr5	177022734	177065018	chr5:177022734-177065018	0	+	177022738	177062093	789624	5	179,104,93,94,507,	0,18391,19043,39323,41777,
#Partially deleted in new
chr5	177022903	177042249	chr5:177022903-177042249	0	+	177022903	177022903	8553170	3	10,104,472,	0,18222,18874,
#Partially deleted in new
chr5	177044326	177050892	chr5:177044326-177050892	0	+	177044326	177044326	8553170	2	207,142,	0,6424,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	177051713	177052963	chr5:177051713-177052963	3	+	177051713	177051713	8553170	2	175,570,	0,680,
#Partially deleted in new
chr5	177086885	177098144	chr5:177086885-177098144	3	+	177089602	177097676	0	18	192,144,264,81,167,124,191,139,194,146,122,111,191,123,71,138,106,618,	0,2664,3504,3859,4052,4799,5435,5760,6252,6520,6768,8444,8647,9171,9401,9718,10406,10641,
#Partially deleted in new
chr5	177086904	177098022	chr5:177086904-177098022	1	+	177089602	177097676	789624	18	129,144,264,81,167,124,191,139,40,96,122,111,191,123,71,138,106,496,	0,2645,3485,3840,4033,4780,5416,5741,6233,6501,6749,8425,8628,9152,9382,9699,10387,10622,
#Partially deleted in new
chr5	177086904	177091104	chr5:177086904-177091104	0	+	177089602	177091104	789624	5	114,144,264,81,167,	0,2645,3485,3840,4033,
#Partially deleted in new
chr5	177086913	177097732	chr5:177086913-177097732	1	+	177089602	177097676	0	18	120,144,264,81,167,124,191,139,194,146,122,111,191,123,71,138,106,206,	0,2636,3476,3831,4024,4771,5407,5732,6224,6492,6740,8416,8619,9143,9373,9690,10378,10613,
#Partially deleted in new
chr5	177086913	177090641	chr5:177086913-177090641	0	+	177089602	177090641	789624	3	164,136,252,	0,2644,3476,
#Partially deleted in new
chr5	177086915	177090563	chr5:177086915-177090563	0	+	177086915	177086915	8553170	3	103,144,229,	0,2634,3419,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	177086915	177090560	chr5:177086915-177090560	0	+	177089602	177090560	789624	4	118,276,144,171,	0,1323,2634,3474,
#Partially deleted in new
chr5	177087418	177090622	chr5:177087418-177090622	0	+	177089602	177090622	789624	3	217,144,233,	0,2131,2971,
#Partially deleted in new
chr5	177089566	177097769	chr5:177089566-177097769	1	+	177089602	177097676	0	16	127,264,81,167,124,191,139,220,122,111,191,123,71,138,106,243,	0,823,1178,1371,2118,2754,3079,3765,4087,5763,5966,6490,6720,7037,7725,7960,
#Deleted in new
chr5	177089575	177091104	chr5:177089575-177091104	0	+	177089602	177090434	789624	5	118,83,264,81,167,	0,282,814,1169,1362,
#Deleted in new
chr5	177089597	177091096	chr5:177089597-177091096	0	+	177089597	177089597	8553170	3	96,264,352,	0,792,1147,
#Deleted in new
chr5	177089602	177093068	chr5:177089602-177093068	0	+	177089602	177089602	8553170	7	91,264,81,167,124,191,423,	0,787,1142,1335,2082,2718,3043,
#Deleted in new
chr5	177091777	177093496	chr5:177091777-177093496	0	+	177091777	177091777	8553170	4	31,191,139,359,	0,543,868,1360,
#Partially deleted in new
chr5	177093174	177096179	chr5:177093174-177096179	0	+	177093174	177096179	789624	6	157,134,122,111,191,123,	0,243,479,2155,2358,2882,
#Deleted in new
chr5	177094824	177095579	chr5:177094824-177095579	0	+	177094824	177094824	8553170	2	616,47,	0,708,
#Deleted in new
chr5	177097190	177097764	chr5:177097190-177097764	0	+	177097190	177097190	8553170	2	207,238,	0,336,
#Deleted in new
chr5	177133024	177135426	chr5:177133024-177135426	0	+	177133024	177133024	8553170	2	130,340,	0,2062,
#Partially deleted in new
chr5	177133078	177300210	chr5:177133078-177300210	1	+	177135170	177295459	0	24	76,114,90,136,173,2560,125,271,110,76,119,144,124,201,180,157,206,113,270,117,142,107,205,6379,	0,2008,2862,58805,71041,76557,102742,105158,106677,111116,113599,115102,118651,123872,126910,134483,136523,140593,147486,149386,150708,155740,158875,160753,
#Partially deleted in new
chr5	177133078	177204236	chr5:177133078-177204236	0	+	177135170	177204236	789624	5	76,114,90,136,117,	0,2008,2862,58805,71041,
#Partially deleted in new
chr5	177133599	177209672	chr5:177133599-177209672	0	+	177135170	177209672	789624	6	35,114,90,136,173,37,	0,1487,2341,58284,70520,76036,
#Deleted in new
chr5	177133797	177136345	chr5:177133797-177136345	0	+	177133797	177133797	8553170	2	155,1259,	0,1289,
#Partially deleted in new
chr5	177133924	177300215	chr5:177133924-177300215	3	+	177135103	177295459	0	23	28,944,136,173,2560,125,271,110,76,119,144,124,201,180,157,206,113,270,117,142,107,205,6384,	0,1162,57959,70195,75711,101896,104312,105831,110270,112753,114256,117805,123026,126064,133637,135677,139747,146640,148540,149862,154894,158029,159907,
#Partially deleted in new
chr5	177134172	177137404	chr5:177134172-177137404	1	+	177135170	177136956	789624	4	73,114,90,532,	0,914,1768,2700,
#Partially deleted in new
chr5	177134228	177295762	chr5:177134228-177295762	1	+	177135170	177295459	0	24	17,114,90,136,173,2560,125,271,110,76,119,144,124,201,180,157,206,113,270,117,142,107,205,1931,	0,858,1712,57655,69891,75407,101592,104008,105527,109966,112449,113952,117501,122722,125760,133333,135373,139443,146336,148236,149558,154590,157725,159603,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	177135166	177210453	chr5:177135166-177210453	0	+	177135170	177169408	789624	6	34,90,35,136,173,818,	0,774,34227,56717,68953,74469,
#Deleted in new
chr5	177264765	177265241	chr5:177264765-177265241	7	+	177264765	177264765	16724991	1	476,	0,
#Partially deleted in new
chr5	177265464	177269758	chr5:177265464-177269758	0	+	177269656	177269758	789624	3	247,157,157,	0,2097,4137,
#Deleted in new
chr5	177265579	177266588	chr5:177265579-177266588	7	-	177265579	177265579	16724991	1	1009,	0,
#Partially deleted in new
chr5	177265726	177280583	chr5:177265726-177280583	0	+	177269656	177280583	789624	5	83,157,206,113,19,	0,1835,3875,7945,14838,
#Partially deleted in new
chr5	177266336	177269684	chr5:177266336-177269684	0	+	177269656	177269684	789624	3	321,157,83,	0,1225,3265,
#Partially deleted in new
chr5	177266379	177269671	chr5:177266379-177269671	0	+	177269656	177269671	8553170	3	292,157,70,	0,1182,3222,
#Partially deleted in new
chr5	177266586	177273678	chr5:177266586-177273678	0	+	177269656	177273678	789624	4	143,157,206,7,	0,975,3015,7085,
#Partially deleted in new
chr5	177288525	177292127	chr5:177288525-177292127	0	+	177288525	177288525	8553170	2	400,174,	0,3428,
#Deleted in new
chr5	177301197	177303733	chr5:177301197-177303733	0	-	177301197	177301197	789624	7	610,63,369,68,79,69,562,	0,727,930,1379,1554,1811,1974,
#Deleted in new
chr5	177301450	177303706	chr5:177301450-177303706	3	-	177301742	177303288	789624	9	357,63,51,100,68,79,69,149,300,	0,474,677,946,1126,1301,1558,1721,1956,
#Deleted in new
chr5	177301451	177303681	chr5:177301451-177303681	0	-	177301451	177301451	8553170	6	356,63,369,68,79,673,	0,473,676,1125,1300,1557,
#Partially deleted in new
chr5	177301460	177311870	chr5:177301460-177311870	0	-	177301460	177301460	8553170	11	347,63,51,100,68,79,69,149,184,1059,110,	0,464,667,936,1116,1291,1548,1711,6320,8965,10300,
#Deleted in new
chr5	177301463	177303708	chr5:177301463-177303708	1	-	177301742	177303288	789624	8	344,63,51,100,68,79,69,537,	0,461,664,933,1113,1288,1545,1708,
#Deleted in new
chr5	177301485	177303710	chr5:177301485-177303710	1	-	177301742	177303107	789624	7	322,63,51,100,68,79,702,	0,439,642,911,1091,1266,1523,
#Deleted in new
chr5	177301502	177303705	chr5:177301502-177303705	0	-	177301502	177301502	8553170	4	305,572,68,697,	0,422,1074,1506,
#Deleted in new
chr5	177302234	177303642	chr5:177302234-177303642	0	-	177302234	177302234	8553170	4	262,68,69,471,	0,342,774,937,
#Partially deleted in new
chr5	177302751	177308062	chr5:177302751-177308062	0	-	177302751	177302751	8553170	4	79,69,149,282,	0,257,420,5029,
#Deleted in new
chr5	177302819	177303744	chr5:177302819-177303744	0	-	177302819	177303288	789624	4	11,69,149,334,	0,189,352,591,
#Deleted in new
chr5	177303056	177303661	chr5:177303056-177303661	0	-	177303056	177303056	8553170	2	264,255,	0,350,
#Partially deleted in new
chr5	177303773	177306959	chr5:177303773-177306959	3	+	177303985	177306570	789624	5	304,226,114,79,538,	0,851,2097,2324,2648,
#Partially deleted in new
chr5	177303802	177306147	chr5:177303802-177306147	0	+	177303802	177303802	8553170	3	275,226,277,	0,822,2068,
#Partially deleted in new
chr5	177303810	177306153	chr5:177303810-177306153	0	+	177303985	177304597	789624	4	267,275,114,56,	0,765,2060,2287,
#Partially deleted in new
chr5	177303814	177306669	chr5:177303814-177306669	0	+	177303985	177305926	789624	5	263,226,70,79,248,	0,810,2100,2283,2607,
#Partially deleted in new
chr5	177303820	177306949	chr5:177303820-177306949	1	+	177303985	177306570	789624	5	257,226,114,79,495,	0,804,2050,2277,2634,
#Deleted in new
chr5	177303854	177304850	chr5:177303854-177304850	0	+	177303854	177303854	8553170	3	223,138,226,	0,438,770,
#Partially deleted in new
chr5	177304687	177306614	chr5:177304687-177306614	0	+	177304687	177306614	789624	4	163,114,79,252,	0,1183,1410,1675,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	177305499	177311898	chr5:177305499-177311898	1	-	177307118	177311830	789624	6	1696,184,115,30,106,138,	0,2281,4926,5168,5879,6261,
#Deleted in new
chr5	177305615	177306163	chr5:177305615-177306163	0	+	177305615	177305615	8553170	2	369,66,	0,482,
#Partially deleted in new
chr5	177306816	177311895	chr5:177306816-177311895	1	-	177307118	177311830	789624	5	1148,115,30,106,135,	0,3609,3851,4562,4944,
#Partially deleted in new
chr5	177307204	177312309	chr5:177307204-177312309	1	-	177307587	177311830	789624	6	499,184,115,30,106,549,	0,576,3221,3463,4174,4556,
#Partially deleted in new
chr5	177307207	177311875	chr5:177307207-177311875	0	-	177307207	177307207	8553170	4	496,184,1059,115,	0,573,3218,4553,
#Partially deleted in new
chr5	177307434	177312757	chr5:177307434-177312757	3	-	177307587	177311830	789624	7	269,184,115,30,106,130,27,	0,346,2991,3233,3944,4326,5296,
#Partially deleted in new
chr5	177307812	177311882	chr5:177307812-177311882	0	-	177307812	177310497	789624	5	152,115,30,136,122,	0,2613,2855,3566,3948,
#Partially deleted in new
chr5	177307881	177311896	chr5:177307881-177311896	0	-	177307881	177311830	789624	4	83,115,106,136,	0,2544,3497,3879,
#Partially deleted in new
chr5	177331561	177351852	chr5:177331561-177351852	3	-	177332085	177351647	789624	8	685,120,115,162,80,118,119,401,	0,2722,5574,5801,6144,6926,19611,19890,
#Deleted in new
chr5	177331953	177334552	chr5:177331953-177334552	0	-	177331953	177331953	8553170	2	293,269,	0,2330,
#Partially deleted in new
chr5	177332030	177351647	chr5:177332030-177351647	1	-	177332201	177351647	789624	8	239,120,115,162,80,118,119,196,	0,2253,5105,5332,5675,6457,19142,19421,
#Partially deleted in new
chr5	177332201	177351652	chr5:177332201-177351652	0	-	177332201	177351647	789624	6	45,53,80,118,119,201,	0,2082,5504,6286,18971,19250,
#Partially deleted in new
chr5	177334308	177351659	chr5:177334308-177351659	0	-	177334308	177351647	789624	7	95,115,162,59,118,119,208,	0,2827,3054,3397,4179,16864,17143,
#Deleted in new
chr5	177336910	177338544	chr5:177336910-177338544	0	-	177336910	177336910	8553170	4	340,162,80,57,	0,452,795,1577,
#Partially deleted in new
chr5	177337137	177351522	chr5:177337137-177351522	0	-	177337137	177351274	789624	5	113,162,80,118,350,	0,225,568,1350,14035,
#Partially deleted in new
chr5	177337434	177351667	chr5:177337434-177351667	0	-	177337434	177337434	8553170	5	31,80,118,119,216,	0,271,1053,13738,14017,
#Deleted in new
chr5	177346072	177346426	chr5:177346072-177346426	7	+	177346072	177346072	16724991	1	354,	0,
#Partially deleted in new
chr5	177357836	177372601	chr5:177357836-177372601	3	+	177358024	177372075	0	15	233,22,179,93,144,144,112,110,204,74,127,82,47,115,729,	0,8126,8340,8871,9054,9577,9877,10320,10880,12754,13068,13328,13513,13638,14036,
#Deleted in new
chr5	177366427	177367557	chr5:177366427-177367557	0	+	177366427	177366427	8553170	3	373,144,144,	0,463,986,
#Deleted in new
chr5	177366942	177372298	chr5:177366942-177372298	0	+	177366942	177372075	789624	11	92,144,112,110,204,77,127,82,47,115,426,	0,471,771,1214,1774,3645,3962,4222,4407,4532,4930,
#Deleted in new
chr5	177366942	177369075	chr5:177366942-177369075	0	+	177366942	177366942	8553170	5	92,144,112,110,359,	0,471,771,1214,1774,
#Deleted in new
chr5	177367216	177368888	chr5:177367216-177368888	0	+	177367216	177367216	8553170	5	49,144,112,110,172,	0,197,497,940,1500,
#Deleted in new
chr5	177367301	177368016	chr5:177367301-177368016	0	+	177367301	177367301	8553170	2	256,303,	0,412,
#Deleted in new
chr5	177367302	177368804	chr5:177367302-177368804	0	+	177367302	177367302	8553170	4	255,112,110,88,	0,411,854,1414,
#Deleted in new
chr5	177367313	177372596	chr5:177367313-177372596	0	+	177367313	177367313	8553170	8	953,204,77,127,82,47,115,724,	0,1403,3274,3591,3851,4036,4161,4559,
#Deleted in new
chr5	177370552	177371578	chr5:177370552-177371578	0	+	177370552	177370552	8553170	5	112,127,82,47,104,	0,352,612,797,922,
#Deleted in new
chr5	177370820	177372292	chr5:177370820-177372292	0	+	177370820	177370820	8553170	5	211,82,47,115,420,	0,344,529,654,1052,
#Deleted in new
chr5	177371065	177371582	chr5:177371065-177371582	0	+	177371065	177371065	8553170	2	181,233,	0,284,
#Deleted in new
chr5	177371106	177372143	chr5:177371106-177372143	0	+	177371106	177371106	8553170	3	140,47,271,	0,243,766,
#Deleted in new
chr5	177371112	177372166	chr5:177371112-177372166	0	+	177371112	177371112	8553170	4	134,47,115,294,	0,237,362,760,
#Partially deleted in new
chr5	177379234	177386290	chr5:177379234-177386290	0	+	177385741	177386290	789624	4	156,156,150,70,	0,6460,6752,6986,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	177384433	177390513	chr5:177384433-177390513	1	+	177385741	177389725	789624	9	54,156,150,129,144,112,196,96,875,	0,1261,1553,1787,1989,3328,3560,3843,5205,
#Partially deleted in new
chr5	177384443	177398848	chr5:177384443-177398848	3	+	177385741	177398286	789624	13	44,156,150,129,144,112,196,96,70,168,117,125,1066,	0,1251,1543,1777,1979,3318,3550,3833,9250,9584,12289,12506,13339,
#Partially deleted in new
chr5	177384450	177397305	chr5:177384450-177397305	0	+	177384450	177384450	8553170	10	37,156,150,129,144,611,70,168,117,356,	0,1244,1536,1770,1972,3311,9243,9577,12282,12499,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	177389646	177398840	chr5:177389646-177398840	0	+	177389646	177389646	8553170	4	838,70,117,1891,	0,4047,7086,7303,
#Partially deleted in new
chr5	177400106	177400636	chr5:177400106-177400636	3	-	177400162	177400576	789624	1	530,	0,
#Partially deleted in new
chr5	177402139	177409576	chr5:177402139-177409576	3	-	177402291	177409527	0	14	320,149,144,137,232,218,166,105,132,111,71,100,58,106,	0,410,1114,1341,1719,2056,2359,2670,2914,3183,3595,3822,6906,7331,
#Deleted in new
chr5	177402159	177404472	chr5:177402159-177404472	0	-	177402159	177402159	8553170	5	300,149,144,610,277,	0,390,1094,1321,2036,
#Deleted in new
chr5	177402162	177403750	chr5:177402162-177403750	0	-	177402162	177402162	8553170	3	297,149,497,	0,387,1091,
#Deleted in new
chr5	177402171	177404472	chr5:177402171-177404472	0	-	177402171	177402171	8553170	4	288,149,144,992,	0,378,1082,1309,
#Deleted in new
chr5	177402624	177403526	chr5:177402624-177403526	0	-	177402624	177402624	8553170	3	239,144,46,	0,629,856,
#Partially deleted in new
chr5	177403203	177432257	chr5:177403203-177432257	0	+	177430915	177432257	789624	4	323,96,113,25,	0,27668,28791,29029,
#Deleted in new
chr5	177403491	177404981	chr5:177403491-177404981	0	-	177403491	177403491	8553170	4	126,232,218,172,	0,367,704,1318,
#Partially deleted in new
chr5	177404405	177434030	chr5:177404405-177434030	0	+	177430915	177434030	789624	9	152,96,113,78,101,93,64,141,117,	0,26466,27589,27827,28300,28741,28941,29130,29508,
#Partially deleted in new
chr5	177426495	177433189	chr5:177426495-177433189	0	+	177430915	177433189	789624	6	124,96,113,78,101,43,	0,4376,5499,5737,6210,6651,
#Partially deleted in new
chr5	177426677	177442830	chr5:177426677-177442830	3	+	177426845	177441790	0	16	220,96,113,78,101,93,64,141,191,38,90,209,138,138,135,1094,	0,4194,5317,5555,6028,6469,6669,6858,7236,8224,8354,9395,9715,14022,14241,15059,
#Partially deleted in new
chr5	177426744	177436685	chr5:177426744-177436685	1	+	177426845	177436554	789624	13	153,96,113,78,101,93,64,141,191,38,90,209,293,	0,4127,5250,5488,5961,6402,6602,6791,7169,8157,8287,9328,9648,
#Partially deleted in new
chr5	177426793	177442901	chr5:177426793-177442901	1	+	177426845	177441790	789624	16	104,96,113,78,101,93,64,141,89,38,90,209,138,138,135,1165,	0,4078,5201,5439,5912,6353,6553,6742,7222,8108,8238,9279,9599,13906,14125,14943,
#Partially deleted in new
chr5	177426842	177441353	chr5:177426842-177441353	1	+	177426845	177441250	0	16	55,96,113,78,101,93,64,141,191,38,90,209,138,138,135,109,	0,4029,5152,5390,5863,6304,6504,6693,7071,8059,8189,9230,9550,13857,14076,14402,
#Partially deleted in new
chr5	177426842	177442625	chr5:177426842-177442625	1	+	177426845	177441827	0	16	55,96,113,78,101,93,64,141,191,38,90,209,138,138,135,891,	0,4029,5152,5390,5863,6304,6504,6693,7071,8059,8189,9230,9550,13857,14076,14892,
#Partially deleted in new
chr5	177426853	177430967	chr5:177426853-177430967	0	+	177430915	177430967	789624	2	44,292,	0,3822,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr5	177431710	177442064	chr5:177431710-177442064	0	+	177431710	177431710	8553170	14	397,78,101,93,64,141,191,38,90,209,138,138,135,328,	0,522,995,1436,1636,1825,2203,3191,3321,4362,4682,8989,9208,10026,
#Deleted in new
chr5	177432232	177436121	chr5:177432232-177436121	0	+	177432232	177433567	789624	8	78,93,64,141,191,38,90,49,	0,914,1114,1303,1681,2669,2799,3840,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	177438502	177447699	chr5:177438502-177447699	3	-	177438502	177438502	8553170	4	368,118,199,56,	0,1411,5893,9141,
#Deleted in new
chr5	177442802	177444580	chr5:177442802-177444580	1	-	177442802	177442802	8553170	3	158,200,185,	0,500,1593,
#Deleted in new
chr5	177443066	177444477	chr5:177443066-177444477	1	-	177443066	177443066	8553170	2	420,82,	0,1329,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	177445978	177447698	chr5:177445978-177447698	0	-	177445978	177445978	8553170	2	366,55,	0,1665,
#Partially deleted in new
chr5	177446444	177455832	chr5:177446444-177455832	0	+	177455067	177455832	789624	3	218,666,109,	0,8384,9279,
#Partially deleted in new
chr5	177446794	177456286	chr5:177446794-177456286	3	+	177455067	177456121	789624	4	166,85,666,563,	0,7161,8034,8929,
#Partially deleted in new
chr5	177446826	177456268	chr5:177446826-177456268	1	+	177455067	177456121	789624	3	134,666,545,	0,8002,8897,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	177448333	177456268	chr5:177448333-177456268	1	+	177455067	177456121	789624	3	74,666,545,	0,6495,7390,
#Partially deleted in new
chr5	177456607	177473741	chr5:177456607-177473741	1	-	177457432	177473521	0	14	896,103,650,171,124,60,64,152,78,147,75,113,56,306,	0,1047,1450,2490,3824,4036,10164,10303,10647,10873,11135,11500,12236,16828,
#Partially deleted in new
chr5	177456926	177473198	chr5:177456926-177473198	3	-	177457432	177472210	0	15	577,103,650,171,124,60,64,152,78,147,75,113,56,279,423,	0,728,1131,2171,3505,3717,9845,9984,10328,10554,10816,11181,11917,15192,15849,
#Partially deleted in new
chr5	177456933	177473624	chr5:177456933-177473624	0	-	177456933	177456933	8553170	13	570,103,650,171,124,60,64,152,78,337,113,56,189,	0,721,1124,2164,3498,3710,9838,9977,10321,10547,11174,11910,16502,
#Partially deleted in new
chr5	177456935	177473637	chr5:177456935-177473637	1	-	177457432	177473521	0	15	568,103,650,171,138,124,60,64,152,78,147,75,113,56,202,	0,719,1122,2162,2667,3496,3708,9836,9975,10319,10545,10807,11172,11908,16500,
#Partially deleted in new
chr5	177457366	177462413	chr5:177457366-177462413	1	-	177457853	177460670	789624	5	1341,171,124,60,182,	0,1731,3065,3277,4865,
#Deleted in new
chr5	177458296	177460642	chr5:177458296-177460642	0	-	177458296	177458296	8553170	3	411,171,211,	0,801,2135,
#Partially deleted in new
chr5	177460431	177473613	chr5:177460431-177473613	0	-	177460431	177473521	789624	10	124,60,64,152,78,147,75,110,56,178,	0,212,6340,6479,6823,7049,7311,7676,8412,13004,
#Deleted in new
chr5	177466830	177467598	chr5:177466830-177467598	0	-	177466830	177466830	8553170	3	232,78,118,	0,424,650,
#Deleted in new
chr5	177467489	177472870	chr5:177467489-177472870	0	-	177467489	177468173	789624	5	138,75,113,56,95,	0,253,618,1354,5286,
#Deleted in new
chr5	177467585	177474401	chr5:177467585-177474401	0	-	177467585	177473521	789624	6	42,75,113,56,87,83,	0,157,522,1258,5850,6733,
#Deleted in new
chr5	177468552	177473622	chr5:177468552-177473622	0	-	177468552	177468552	8553170	2	347,187,	0,4883,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	177476630	177479656	chr5:177476630-177479656	3	-	177476630	177476630	8553170	1	3026,	0,
#Partially deleted in new
chr5	177483393	177497561	chr5:177483393-177497561	1	-	177483643	177496512	0	13	337,116,121,181,235,62,37,137,17,31,152,107,34,	0,473,676,4674,5999,6377,7476,7616,8010,9011,9132,13023,14134,
#Partially deleted in new
chr5	177483393	177497561	chr5:177483393-177497561	0	-	177491099	177496512	0	14	337,116,121,181,235,62,37,137,17,119,31,152,107,34,	0,473,676,4674,5999,6377,7476,7616,8010,8413,9011,9132,13023,14134,
#Partially deleted in new
chr5	177483395	177497583	chr5:177483395-177497583	3	-	177483643	177496512	0	13	335,116,121,181,235,62,37,137,119,31,152,107,56,	0,471,674,4672,5997,6375,7474,7614,8411,9009,9130,13021,14132,
#Partially deleted in new
chr5	177483397	177497601	chr5:177483397-177497601	0	-	177490027	177496512	0	13	333,116,121,181,235,261,37,137,119,31,152,107,74,	0,469,672,4670,5995,6373,7472,7612,8409,9007,9128,13019,14130,
#Deleted in new
chr5	177483694	177484473	chr5:177483694-177484473	0	-	177483694	177483694	8553170	3	36,116,404,	0,172,375,
#Deleted in new
chr5	177483874	177485014	chr5:177483874-177485014	0	-	177483874	177483874	8553170	3	108,121,176,	0,195,964,
#Partially deleted in new
chr5	177487896	177497583	chr5:177487896-177497583	1	-	177488191	177496512	0	9	352,235,37,137,119,31,152,107,56,	0,1496,2973,3113,3910,4508,4629,8520,9631,
#Deleted in new
chr5	177489810	177497586	chr5:177489810-177497586	0	-	177489810	177496512	789624	8	289,37,137,119,31,152,107,59,	0,1059,1199,1996,2594,2715,6606,7717,
#Deleted in new
chr5	177490245	177497573	chr5:177490245-177497573	1	-	177490496	177496512	0	8	348,37,137,119,31,152,107,46,	0,624,764,1561,2159,2280,6171,7282,
#Deleted in new
chr5	177491009	177497601	chr5:177491009-177497601	0	-	177491009	177496512	789624	6	137,170,31,152,107,74,	0,797,1395,1516,5407,6518,
#Deleted in new
chr5	177491024	177496831	chr5:177491024-177496831	0	-	177491024	177496512	789624	6	122,119,31,152,107,228,	0,782,1380,1501,5392,5579,
#Deleted in new
chr5	177491071	177492572	chr5:177491071-177492572	0	-	177491071	177491071	8553170	4	349,170,31,47,	0,735,1333,1454,
#Deleted in new
chr5	177491072	177492970	chr5:177491072-177492970	0	-	177491072	177491072	8553170	4	74,119,31,445,	0,734,1332,1453,
#Deleted in new
chr5	177491095	177496427	chr5:177491095-177496427	0	-	177491827	177496427	789624	6	51,17,189,31,152,11,	0,308,711,1309,1430,5321,
#Deleted in new
chr5	177491758	177497606	chr5:177491758-177497606	0	-	177491758	177491758	8553170	4	677,152,107,79,	0,767,4658,5769,
#Deleted in new
chr5	177492412	177496877	chr5:177492412-177496877	0	-	177492412	177496512	789624	3	23,152,461,	0,113,4004,
#Partially deleted in new
chr5	177494994	177503647	chr5:177494994-177503647	3	+	177494994	177494994	8553170	2	144,290,	0,8363,
#Partially deleted in new
chr5	177501906	177510385	chr5:177501906-177510385	1	-	177503044	177509540	789624	6	1486,173,100,306,101,126,	0,2836,3104,6330,7568,8353,
#Partially deleted in new
chr5	177502087	177510382	chr5:177502087-177510382	1	-	177503044	177509540	789624	5	1305,173,100,183,123,	0,2655,2923,7387,8172,
#Partially deleted in new
chr5	177502087	177508877	chr5:177502087-177508877	0	-	177502087	177502087	8553170	4	1305,173,100,641,	0,2655,2923,6149,
#Partially deleted in new
chr5	177503747	177509857	chr5:177503747-177509857	1	-	177503982	177509540	789624	6	913,173,100,306,183,100,	0,995,1263,4489,5727,6010,
#Partially deleted in new
chr5	177503749	177509857	chr5:177503749-177509857	3	-	177503982	177509852	789624	6	911,173,100,306,183,56,	0,993,1261,4487,5725,6052,
#Partially deleted in new
chr5	177503783	177510382	chr5:177503783-177510382	1	-	177503982	177509540	789624	6	877,173,100,306,183,233,	0,959,1227,4453,5691,6366,
#Partially deleted in new
chr5	177504746	177509846	chr5:177504746-177509846	0	-	177504746	177509540	789624	5	169,100,306,101,45,	0,264,3490,4728,5055,
#Partially deleted in new
chr5	177505012	177509829	chr5:177505012-177509829	0	-	177505012	177509540	789624	4	98,306,101,72,	0,3224,4462,4745,
#Partially deleted in new
chr5	177505050	177509826	chr5:177505050-177509826	0	-	177505050	177509540	789624	4	60,306,110,69,	0,3186,4424,4707,
#Deleted in new
chr5	177508477	177511274	chr5:177508477-177511274	0	-	177508477	177509540	789624	3	65,183,355,	0,997,2442,
#Deleted in new
chr5	177508783	177510382	chr5:177508783-177510382	0	-	177508783	177508783	8553170	2	874,123,	0,1476,
#Deleted in new
chr5	177509165	177509826	chr5:177509165-177509826	0	-	177509165	177509165	8553170	2	492,69,	0,592,
#Deleted in new
chr5	177509501	177511267	chr5:177509501-177511267	0	-	177509501	177509540	789624	3	156,39,348,	0,1041,1418,
#Partially deleted in new
chr5	177511576	177516916	chr5:177511576-177516916	0	-	177511790	177516916	789624	16	351,111,72,150,97,72,132,163,137,154,73,137,61,75,160,192,	0,519,745,919,1203,1434,1776,2108,3124,3339,3609,4108,4352,4542,4711,5148,
#Partially deleted in new
chr5	177511576	177517469	chr5:177511576-177517469	3	-	177511790	177516945	0	17	351,111,72,150,97,72,132,163,137,154,73,137,61,75,160,111,551,	0,519,745,919,1203,1434,1776,2108,3124,3339,3609,4108,4352,4542,4711,5148,5342,
#Deleted in new
chr5	177511576	177512545	chr5:177511576-177512545	0	-	177511576	177511576	8553170	3	351,111,224,	0,519,745,
#Partially deleted in new
chr5	177511577	177516961	chr5:177511577-177516961	0	-	177511577	177511577	8553170	16	350,111,72,150,97,72,132,163,137,154,73,137,61,75,548,43,	0,518,744,918,1202,1433,1775,2107,3123,3338,3608,4107,4351,4541,4710,5341,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	177511577	177516950	chr5:177511577-177516950	0	-	177511577	177511577	8553170	13	350,111,72,150,97,72,495,137,154,1008,160,111,32,	0,518,744,918,1202,1433,1775,3123,3338,3608,4710,5147,5341,
#Deleted in new
chr5	177511599	177515333	chr5:177511599-177515333	0	-	177511599	177511599	8553170	11	328,111,72,150,97,72,132,163,137,154,148,	0,496,722,896,1180,1411,1753,2085,3101,3316,3586,
#Deleted in new
chr5	177512495	177514746	chr5:177512495-177514746	0	-	177512495	177512495	8553170	5	381,72,132,163,46,	0,515,857,1189,2205,
#Deleted in new
chr5	177513001	177513784	chr5:177513001-177513784	0	-	177513001	177513001	8553170	2	483,100,	0,683,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	177513071	177515353	chr5:177513071-177515353	0	-	177513071	177513071	8553170	6	11,132,163,137,110,168,	0,281,613,1629,1844,2114,
#Partially deleted in new
chr5	177513398	177515731	chr5:177513398-177515731	0	-	177514179	177515731	789624	7	86,163,116,137,154,73,47,	0,286,774,1302,1517,1787,2286,
#Deleted in new
chr5	177513434	177515039	chr5:177513434-177515039	0	-	177513434	177513434	8553170	3	50,163,339,	0,250,1266,
#Partially deleted in new
chr5	177514928	177516935	chr5:177514928-177516935	0	-	177514928	177514928	8553170	7	141,73,137,265,160,111,17,	0,257,756,1000,1359,1796,1990,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	177514937	177516324	chr5:177514937-177516324	0	-	177515290	177516324	789624	6	132,176,137,61,75,37,	0,248,747,991,1181,1350,
#Partially deleted in new
chr5	177514980	177516950	chr5:177514980-177516950	0	-	177515304	177516945	789624	8	89,154,137,61,75,160,111,32,	0,205,704,948,1138,1307,1744,1938,
#Partially deleted in new
chr5	177515021	177516950	chr5:177515021-177516950	0	-	177515021	177515021	8553170	7	48,73,61,75,160,111,32,	0,164,907,1097,1266,1703,1897,
#Partially deleted in new
chr5	177515304	177516945	chr5:177515304-177516945	1	-	177515304	177516945	789624	7	35,137,61,75,160,111,27,	0,380,624,814,983,1420,1614,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	177515340	177516895	chr5:177515340-177516895	0	-	177515340	177515340	8553170	3	853,160,171,	0,947,1384,
#Deleted in new
chr5	177515771	177516961	chr5:177515771-177516961	0	-	177516504	177516945	789624	6	50,61,75,229,111,43,	0,157,347,516,953,1147,
#Deleted in new
chr5	177516504	177516945	chr5:177516504-177516945	1	-	177516504	177516945	789624	3	12,111,27,	0,220,414,
#Partially deleted in new
chr5	177519787	177554507	chr5:177519787-177554507	3	-	177521974	177554458	789624	9	394,98,76,1021,199,388,235,243,259,	0,2186,4169,4397,12655,16570,18085,19117,34461,
#Partially deleted in new
chr5	177519788	177525487	chr5:177519788-177525487	0	-	177519788	177519788	8553170	4	393,98,76,1303,	0,2185,4168,4396,
#Partially deleted in new
chr5	177519789	177554541	chr5:177519789-177554541	0	-	177554029	177554458	789624	12	392,98,76,1021,240,248,199,388,235,243,90,1374,	0,2184,4167,4395,11492,12163,12653,16568,18083,19115,32252,33378,
#Partially deleted in new
chr5	177519789	177539066	chr5:177519789-177539066	0	-	177536472	177539018	789624	10	392,98,76,1021,240,248,199,129,235,162,	0,2184,4167,4395,11492,12163,12653,16568,18083,19115,
#Deleted in new
chr5	177519790	177522162	chr5:177519790-177522162	0	-	177519790	177519790	8553170	2	391,189,	0,2183,
#Partially deleted in new
chr5	177519790	177536390	chr5:177519790-177536390	0	-	177532038	177536390	789624	8	391,98,76,1021,240,179,199,33,	0,2183,4166,4394,11491,12162,12652,16567,
#Partially deleted in new
chr5	177519791	177532533	chr5:177519791-177532533	0	-	177521974	177532533	789624	6	390,98,76,1021,240,91,	0,2182,4165,4393,11490,12651,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	177519930	177522999	chr5:177519930-177522999	0	-	177519930	177519930	8553170	3	251,98,45,	0,2043,3024,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	177523179	177524421	chr5:177523179-177524421	0	-	177523179	177523179	8553170	3	127,76,237,	0,777,1005,
#Partially deleted in new
chr5	177525053	177531834	chr5:177525053-177531834	0	-	177525053	177525053	8553170	2	152,553,	0,6228,
#Partially deleted in new
chr5	177525196	177554458	chr5:177525196-177554458	0	-	177525196	177525196	8553170	4	9,199,61,210,	0,7246,21971,29052,
#Partially deleted in new
chr5	177531337	177532612	chr5:177531337-177532612	0	-	177531337	177531337	8553170	3	184,45,170,	0,818,1105,
#Deleted in new
chr5	177536303	177538019	chr5:177536303-177538019	0	-	177536303	177536303	8553170	2	442,147,	0,1569,
#Deleted in new
chr5	177537986	177539351	chr5:177537986-177539351	0	-	177537986	177539018	789624	2	121,447,	0,918,
#Partially deleted in new
chr5	177538005	177553766	chr5:177538005-177553766	0	-	177538005	177539018	789624	3	102,138,599,	0,899,15162,
#Partially deleted in new
chr5	177538084	177553266	chr5:177538084-177553266	0	-	177538084	177539018	789624	4	23,243,61,99,	0,820,9083,15083,
#Partially deleted in new
chr5	177538910	177554347	chr5:177538910-177554347	0	-	177553679	177554347	789624	4	237,183,306,99,	0,14257,14586,15338,
#Deleted in new
chr5	177554823	177555364	chr5:177554823-177555364	3	+	177554823	177554823	8553170	1	541,	0,
#Partially deleted in new
chr5	177592157	177596124	chr5:177592157-177596124	3	+	177592214	177595416	789624	5	241,101,126,147,858,	0,417,1492,1981,3109,
#Partially deleted in new
chr5	177592216	177594115	chr5:177592216-177594115	0	+	177592216	177592216	8553170	2	459,466,	0,1433,
#Partially deleted in new
chr5	177592271	177595420	chr5:177592271-177595420	0	+	177592271	177592271	8553170	4	127,101,636,154,	0,303,1378,2995,
#Partially deleted in new
chr5	177592487	177595577	chr5:177592487-177595577	0	+	177592487	177592487	8553170	4	188,126,147,311,	0,1162,1651,2779,
#Partially deleted in new
chr5	177592649	177594195	chr5:177592649-177594195	0	+	177592649	177592649	8553170	3	26,61,57,	0,1000,1489,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	177593221	177595386	chr5:177593221-177595386	0	+	177593221	177593221	8553170	3	554,147,120,	0,917,2045,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	177600099	177610347	chr5:177600099-177610347	3	+	177600210	177609695	0	6	161,363,226,84,105,808,	0,4079,7202,8439,8810,9440,
#Partially deleted in new
chr5	177600131	177608214	chr5:177600131-177608214	0	+	177600131	177600131	8553170	3	129,263,913,	0,4147,7170,
#Partially deleted in new
chr5	177600161	177609707	chr5:177600161-177609707	0	+	177600210	177607382	789624	6	99,363,245,84,105,168,	0,4017,7121,8377,8748,9378,
#Partially deleted in new
chr5	177600205	177607357	chr5:177600205-177607357	0	+	177604470	177607357	789624	4	55,78,363,56,	0,1220,3973,7096,
#Partially deleted in new
chr5	177600229	177607338	chr5:177600229-177607338	0	+	177604470	177607338	789624	3	31,476,37,	0,3836,7072,
#Deleted in new
chr5	177604311	177605224	chr5:177604311-177605224	0	+	177604311	177605048	789624	2	230,180,	0,733,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	177605790	177610266	chr5:177605790-177610266	0	+	177605790	177605790	8553170	4	1737,84,105,727,	0,2748,3119,3749,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	177607364	177610328	chr5:177607364-177610328	0	+	177607364	177607364	8553170	2	1650,789,	0,2175,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	177611252	177619754	chr5:177611252-177619754	3	+	177611252	177611252	8553170	3	749,163,839,	0,7389,7663,
#Partially deleted in new
chr5	177619058	177631535	chr5:177619058-177631535	5	-	177619058	177619058	16724991	5	331,34,70,233,170,	0,1414,7377,8323,12307,
#Partially deleted in new
chr5	177626435	177672149	chr5:177626435-177672149	7	-	177626435	177626435	16724991	4	70,233,1373,129,	0,946,4930,45585,
#Partially deleted in new
chr5	177632074	177672209	chr5:177632074-177672209	5	-	177632074	177632074	16724991	2	664,189,	0,39946,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	177682293	177713969	chr5:177682293-177713969	3	+	177682293	177682293	8553170	3	78,180,173,	0,24412,31503,
#Partially deleted in new
chr5	177707980	177717252	chr5:177707980-177717252	0	-	177707980	177707980	8553170	5	102,169,124,71,90,	0,5767,6073,8364,9182,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr5	177711068	177780465	chr5:177711068-177780465	0	-	177724112	177748643	789624	27	2102,169,71,134,187,155,663,106,68,38,31,71,31,71,25,71,31,71,25,71,25,77,25,80,25,59,17,	0,2679,5276,6094,7078,7380,10838,13032,13226,13715,17954,18416,20500,20961,23311,23794,25510,25973,28044,28531,29708,30187,33325,33819,36700,37572,69380,
#Partially deleted in new
chr5	177713024	177716363	chr5:177713024-177716363	0	-	177713024	177713024	8553170	4	146,169,109,19,	0,723,1044,3320,
#Partially deleted in new
chr5	177713068	177714152	chr5:177713068-177714152	0	-	177713068	177713068	8553170	3	102,169,99,	0,679,985,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr5	177722294	177783398	chr5:177722294-177783398	1	-	177724112	177748643	789624	23	275,106,68,38,31,71,31,71,25,71,31,71,25,71,25,77,25,80,25,59,194,56,115,	0,1806,2000,2489,6728,7190,9274,9735,12085,12568,14284,14747,16818,17305,18482,18961,22099,22593,25474,26346,41022,58154,60989,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	177722335	177723156	chr5:177722335-177723156	0	-	177722335	177722335	8553170	2	234,263,	0,558,
#Partially deleted in new
chr5	177723363	177780676	chr5:177723363-177780676	1	-	177724112	177748643	789624	20	843,68,38,31,71,31,71,25,71,31,71,25,71,25,77,25,80,25,59,228,	0,931,1420,5659,6121,8205,8666,11016,11499,13215,13678,15749,16236,17413,17892,21030,21524,24405,25277,57085,
#Partially deleted in new
chr5	177723364	177753206	chr5:177723364-177753206	3	-	177724112	177753206	789624	21	842,68,38,31,71,31,71,25,71,31,71,25,71,25,77,25,80,25,59,144,31,	0,930,1419,5658,6120,8204,8665,11015,11498,13214,13677,15748,16235,17412,17891,21029,21523,24404,25276,27544,29811,
#Partially deleted in new
chr5	177723576	177780633	chr5:177723576-177780633	1	-	177724112	177748643	789624	12	630,68,38,31,71,25,80,25,59,194,31,185,	0,718,1207,7992,8453,10803,21311,24192,25064,39740,43573,56872,
#Partially deleted in new
chr5	177723950	177780845	chr5:177723950-177780845	1	-	177724290	177748643	789624	9	412,38,31,71,25,80,25,59,397,	0,833,5072,8079,10429,20937,23818,24690,56498,
#Partially deleted in new
chr5	177724158	177782837	chr5:177724158-177782837	0	-	177724158	177748643	789624	11	48,68,38,31,71,25,80,25,59,56,95,	0,136,625,7410,7871,20235,20729,23610,24482,56290,58584,
#Partially deleted in new
chr5	177731573	177745214	chr5:177731573-177745214	0	-	177731573	177731573	8553170	11	26,71,25,71,31,71,25,77,25,80,51,	0,456,2806,3289,5005,5468,9203,9682,12820,13314,13590,
#Partially deleted in new
chr5	177737047	177753275	chr5:177737047-177753275	0	-	177747799	177753206	789624	10	65,25,71,25,77,25,80,49,59,100,	0,2065,2552,3729,4208,7346,7840,10721,11593,16128,
#Partially deleted in new
chr5	177739614	177753297	chr5:177739614-177753297	0	-	177748698	177753206	789624	9	56,25,77,25,80,25,59,94,122,	0,1162,1641,4779,5273,8154,9026,11344,13561,
#Partially deleted in new
chr5	177739634	177753296	chr5:177739634-177753296	0	-	177739634	177753206	789624	8	36,25,77,25,80,25,59,121,	0,1142,1621,4759,5253,8134,9006,13541,
#Partially deleted in new
chr5	177740192	177753263	chr5:177740192-177753263	0	-	177740192	177740192	8553170	8	166,25,77,25,80,25,59,88,	0,584,1063,4201,4695,7576,8448,12983,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	177741293	177750394	chr5:177741293-177750394	0	-	177741293	177741293	8553170	6	39,25,80,25,59,241,	0,3100,3594,6475,7347,8860,
#Partially deleted in new
chr5	177747453	177753263	chr5:177747453-177753263	0	-	177747453	177747453	8553170	4	340,59,94,88,	0,1187,3505,5722,
#Partially deleted in new
chr5	177747526	177753275	chr5:177747526-177753275	0	-	177747526	177747526	8553170	4	267,59,144,100,	0,1114,3382,5649,
#Partially deleted in new
chr5	177747723	177782965	chr5:177747723-177782965	0	-	177747723	177748643	789624	6	70,59,194,31,56,148,	0,917,15593,19426,32725,35094,
#Partially deleted in new
chr5	177762928	177783364	chr5:177762928-177783364	0	-	177762928	177762928	8553170	3	582,56,81,	0,17520,20355,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	177779496	177781684	chr5:177779496-177781684	0	-	177779496	177779496	8553170	3	221,56,100,	0,952,2088,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	177779555	177782813	chr5:177779555-177782813	0	-	177779555	177779555	8553170	3	162,56,71,	0,893,3187,
#Partially deleted in new
chr5	177782196	177794396	chr5:177782196-177794396	3	+	177782196	177782196	8553170	3	328,134,1055,	0,1525,11145,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	177801203	177803344	chr5:177801203-177803344	3	-	177801203	177801203	8553170	2	580,104,	0,2037,
#Partially deleted in new
chr5	177809406	177883916	chr5:177809406-177883916	7	+	177809406	177809406	16724991	4	115,162,101,250,	0,72962,73245,74260,
#Partially deleted in new
chr5	177809480	177882383	chr5:177809480-177882383	4	+	177809480	177809480	16724991	6	41,91,140,157,205,15,	0,23221,27180,67051,69163,72888,
#Partially deleted in new
chr5	177832751	177882516	chr5:177832751-177882516	4	+	177832751	177832751	16724991	4	41,157,205,148,	0,43780,45892,49617,
#Partially deleted in new
chr5	177836433	177837646	chr5:177836433-177837646	7	-	177836433	177836433	16724991	2	642,252,	0,961,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	177857944	177871190	chr5:177857944-177871190	3	-	177857944	177857944	8553170	2	209,338,	0,12908,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	177864564	177871183	chr5:177864564-177871183	0	-	177864564	177864564	8553170	2	70,331,	0,6288,
#Partially deleted in new
chr5	177875521	177884272	chr5:177875521-177884272	4	+	177875521	177875521	16724991	6	339,157,205,162,101,606,	0,1010,3122,6847,7130,8145,
#Partially deleted in new
chr5	177875594	177883831	chr5:177875594-177883831	5	+	177875594	177875594	16724991	6	266,157,205,162,101,165,	0,937,3049,6774,7057,8072,
#Partially deleted in new
chr5	177876254	177950732	chr5:177876254-177950732	5	+	177876254	177876254	16724991	6	74,157,205,162,101,424,	0,277,2389,6114,6397,74054,
#Partially deleted in new
chr5	177876254	177882505	chr5:177876254-177882505	4	+	177876254	177876254	16724991	4	74,157,205,137,	0,277,2389,6114,
#Partially deleted in new
chr5	177878530	177882661	chr5:177878530-177882661	4	+	177878530	177878530	16724991	3	318,162,10,	0,3838,4121,
#Partially deleted in new
chr5	177878789	177883701	chr5:177878789-177883701	4	+	177878789	177878789	16724991	4	59,162,222,35,	0,3579,3862,4877,
#Deleted in new
chr5	177882390	177883000	chr5:177882390-177883000	4	+	177882390	177882390	16724991	2	140,349,	0,261,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	177882442	177921387	chr5:177882442-177921387	4	+	177882442	177882442	16724991	3	88,101,326,	0,209,38619,
#Partially deleted in new
chr5	177882685	177917267	chr5:177882685-177917267	4	+	177882685	177882685	16724991	2	67,183,	0,34399,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	177885259	177932277	chr5:177885259-177932277	4	+	177885259	177885259	16724991	2	87,481,	0,46537,
#Partially deleted in new
chr5	177939621	177983054	chr5:177939621-177983054	3	+	177939621	177939621	8553170	2	145,402,	0,43031,
#Partially deleted in new
chr5	177950334	177957750	chr5:177950334-177957750	1	+	177950334	177950334	8553170	3	231,240,142,	0,1382,7274,
#Partially deleted in new
chr5	177951412	177963960	chr5:177951412-177963960	3	+	177951412	177951412	8553170	4	106,240,71,134,	0,304,6196,12414,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	177951947	177960149	chr5:177951947-177960149	1	+	177951947	177951947	8553170	3	9,71,431,	0,5661,7771,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	177953164	177957759	chr5:177953164-177957759	0	+	177953164	177953164	8553170	2	128,151,	0,4444,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	177967003	177967457	chr5:177967003-177967457	3	+	177967003	177967003	8553170	1	454,	0,
#Deleted in new
chr5	177971315	177972281	chr5:177971315-177972281	7	+	177971315	177971315	16724991	1	966,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	177992234	177996242	chr5:177992234-177996242	3	-	177992708	177995933	789624	3	813,233,418,	0,1871,3590,
#Partially deleted in new
chr5	178006404	178039396	chr5:178006404-178039396	0	+	178035151	178039396	789624	7	115,56,194,59,25,80,10,	0,2921,13855,28691,29607,32433,32982,
#Partially deleted in new
chr5	178006837	178036081	chr5:178006837-178036081	0	+	178006837	178006837	8553170	6	148,56,31,194,59,70,	0,2488,9748,13422,28258,29174,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	178006971	178049087	chr5:178006971-178049087	1	+	178035151	178047121	789624	12	89,56,59,25,80,25,71,31,38,68,106,423,	0,2354,28124,29040,31866,32415,34721,35223,39442,39900,40056,41693,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	178006989	178010274	chr5:178006989-178010274	0	+	178006989	178006989	8553170	3	71,56,162,	0,2336,3123,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	178008152	178010329	chr5:178008152-178010329	0	+	178008152	178008152	8553170	3	100,56,217,	0,1173,1960,
#Partially deleted in new
chr5	178008984	178047655	chr5:178008984-178047655	1	+	178035151	178046943	789624	9	397,59,25,80,25,71,31,38,784,	0,26111,27027,29853,30402,32708,33210,37429,37887,
#Partially deleted in new
chr5	178008984	178047281	chr5:178008984-178047281	1	+	178035151	178047121	789624	10	397,59,25,80,25,71,31,38,68,254,	0,26111,27027,29853,30402,32708,33210,37429,37887,38043,
#Partially deleted in new
chr5	178030523	178046895	chr5:178030523-178046895	0	+	178030592	178046895	789624	10	100,144,59,25,80,25,71,31,38,24,	0,2219,4572,5488,8314,8863,11169,11671,15890,16348,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	178030535	178048999	chr5:178030535-178048999	3	+	178030592	178047121	789624	11	88,59,25,80,25,71,31,38,68,106,335,	0,4560,5476,8302,8851,11157,11659,15878,16336,16492,18129,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	178048775	178054133	chr5:178048775-178054133	0	+	178048775	178048775	8553170	5	546,155,187,134,76,	0,3757,4027,5064,5282,
#Partially deleted in new
chr5	178052418	178054779	chr5:178052418-178054779	0	+	178052418	178052418	8553170	4	269,187,134,42,	0,384,1421,2319,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	178052625	178055559	chr5:178052625-178055559	0	+	178052625	178052625	8553170	4	62,134,70,191,	0,1214,2112,2743,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	178053871	178055559	chr5:178053871-178055559	0	+	178053871	178053871	8553170	3	102,92,191,	0,844,1497,
#Partially deleted in new
chr5	178055603	178056194	chr5:178055603-178056194	7	+	178055603	178055603	16724991	1	591,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	178113442	178126087	chr5:178113442-178126087	3	+	178119583	178122001	789624	5	329,360,522,255,4614,	0,6111,6735,7655,8031,
#Partially deleted in new
chr5	178130995	178148568	chr5:178130995-178148568	1	+	178138119	178148032	789624	11	59,140,151,146,141,101,167,166,103,155,600,	0,241,7112,11587,11856,12631,12946,15118,16537,16733,16973,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	178130995	178150565	chr5:178130995-178150565	3	+	178138119	178148032	789624	12	59,140,140,151,146,141,101,167,166,103,155,2597,	0,241,4177,7112,11587,11856,12631,12946,15118,16537,16733,16973,
#Partially deleted in new
chr5	178131010	178148549	chr5:178131010-178148549	0	+	178131010	178131010	8553170	8	44,151,410,482,166,103,155,581,	0,7097,11572,12616,15103,16522,16718,16958,
#Partially deleted in new
chr5	178131016	178142976	chr5:178131016-178142976	0	+	178138119	178138353	789624	5	38,140,289,146,125,	0,220,7091,11566,11835,
#Partially deleted in new
chr5	178131024	178143644	chr5:178131024-178143644	0	+	178138119	178143644	789624	5	352,151,146,141,18,	0,7083,11558,11827,12602,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	178131034	178142613	chr5:178131034-178142613	0	+	178138119	178142613	789624	5	20,140,220,151,31,	0,202,4994,7073,11548,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	178135212	178148570	chr5:178135212-178148570	1	+	178135212	178148032	789624	9	100,146,141,101,167,166,103,155,602,	0,7370,7639,8414,8729,10901,12320,12516,12756,
#Partially deleted in new
chr5	178138107	178143709	chr5:178138107-178143709	0	+	178138119	178142682	789624	4	151,96,141,83,	0,4525,4744,5519,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	178141339	178148566	chr5:178141339-178148566	0	+	178141339	178141339	8553170	8	1389,141,101,167,166,103,155,598,	0,1512,2287,2602,4774,6193,6389,6629,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	178141671	178149991	chr5:178141671-178149991	0	+	178141671	178141671	8553170	6	1321,482,166,103,155,2023,	0,1955,4442,5861,6057,6297,
#Deleted in new
chr5	178145969	178148540	chr5:178145969-178148540	0	+	178145969	178145969	8553170	3	1666,155,572,	0,1759,1999,
#Partially deleted in new
chr5	178149459	178153967	chr5:178149459-178153967	3	-	178149712	178153817	789624	4	379,106,70,310,	0,1428,4031,4198,
#Partially deleted in new
chr5	178149481	178153829	chr5:178149481-178153829	1	-	178149795	178153817	789624	3	357,70,172,	0,4009,4176,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	178150530	178153579	chr5:178150530-178153579	0	-	178150824	178153579	789624	2	463,89,	0,2960,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	178150638	178153882	chr5:178150638-178153882	0	-	178150638	178153817	789624	4	71,106,70,225,	0,249,2852,3019,
#Partially deleted in new
chr5	178150825	178153894	chr5:178150825-178153894	0	-	178150825	178153817	789624	3	168,70,237,	0,2665,2832,
#Deleted in new
chr5	178153221	178153884	chr5:178153221-178153884	0	-	178153221	178153221	8553170	2	339,227,	0,436,
#Partially deleted in new
chr5	178165701	178166562	chr5:178165701-178166562	7	+	178165701	178165701	16724991	1	861,	0,
#Deleted in new
chr5	178184502	178187432	chr5:178184502-178187432	3	-	178185718	178187299	789624	1	2930,	0,
#Partially deleted in new
chr5	178204506	178211163	chr5:178204506-178211163	3	+	178204837	178210623	789624	8	234,232,169,159,132,118,141,611,	0,308,1335,2225,2587,4823,5625,6046,
#Partially deleted in new
chr5	178204532	178211155	chr5:178204532-178211155	1	+	178204837	178210623	789624	8	208,232,169,159,132,103,141,603,	0,282,1309,2199,2561,4797,5599,6020,
#Partially deleted in new
chr5	178204538	178211142	chr5:178204538-178211142	1	+	178204837	178210623	789624	7	202,232,169,159,132,118,590,	0,276,1303,2193,2555,4791,6014,
#Partially deleted in new
chr5	178204540	178211119	chr5:178204540-178211119	1	+	178204837	178210623	789624	7	200,232,169,159,132,112,567,	0,274,1301,2191,2553,4789,6012,
#Partially deleted in new
chr5	178204543	178211155	chr5:178204543-178211155	1	+	178204837	178210623	789624	7	197,232,169,159,132,103,603,	0,271,1298,2188,2550,4786,6009,
#Partially deleted in new
chr5	178204547	178211149	chr5:178204547-178211149	1	+	178204837	178210623	789624	6	499,169,159,132,118,597,	0,1294,2184,2546,4782,6005,
#Partially deleted in new
chr5	178204570	178211142	chr5:178204570-178211142	1	+	178204837	178210623	789624	7	476,169,159,132,118,141,590,	0,1271,2161,2523,4759,5561,5982,
#Deleted in new
chr5	178205567	178206866	chr5:178205567-178206866	0	+	178205567	178205567	8553170	2	443,135,	0,1164,
#Partially deleted in new
chr5	178208496	178232785	chr5:178208496-178232785	3	-	178211920	178232550	789624	13	419,81,131,90,155,226,83,117,88,75,160,119,294,	0,3393,4476,6299,6779,13858,14355,15951,16145,16858,21443,22908,23995,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	178208498	178226079	chr5:178208498-178226079	0	-	178208498	178208498	8553170	10	417,81,131,90,155,138,83,117,88,725,	0,3391,4474,6297,6777,13856,14353,15949,16143,16856,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	178208583	178230940	chr5:178208583-178230940	0	-	178208583	178208583	8553170	6	332,81,131,90,1716,359,	0,3306,4389,6212,6692,21998,
#Partially deleted in new
chr5	178208583	178232791	chr5:178208583-178232791	0	-	178208583	178208583	8553170	13	332,81,131,90,155,226,83,117,88,75,160,119,1123,	0,3306,4389,6212,6692,13771,14268,15864,16058,16771,21356,22821,23085,
#Partially deleted in new
chr5	178208586	178232790	chr5:178208586-178232790	0	-	178224709	178232550	789624	10	329,81,131,90,155,138,83,114,119,299,	0,3303,4386,6209,6689,13768,14265,16029,22818,23905,
#Partially deleted in new
chr5	178208622	178222476	chr5:178208622-178222476	0	-	178211920	178222476	789624	6	293,210,131,90,155,122,	0,3138,4350,6173,6653,13732,
#Partially deleted in new
chr5	178208638	178232768	chr5:178208638-178232768	0	-	178231757	178232550	789624	14	277,81,90,155,226,83,117,88,75,23,160,119,198,277,	0,3251,6157,6637,13716,14213,15809,16003,16716,21059,21301,22766,23030,23853,
#Partially deleted in new
chr5	178208643	178232773	chr5:178208643-178232773	0	-	178208643	178208643	789624	10	272,81,90,226,83,117,88,75,160,1105,	0,3246,6152,13711,14208,15804,15998,16711,21296,23025,
#Partially deleted in new
chr5	178208653	178230320	chr5:178208653-178230320	0	-	178208653	178208653	8553170	4	262,81,90,381,	0,3236,6142,21286,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	178210967	178225010	chr5:178210967-178225010	0	-	178210967	178210967	8553170	7	1003,131,90,155,226,83,563,	0,2005,3828,4308,11387,11884,13480,
#Partially deleted in new
chr5	178211889	178222934	chr5:178211889-178222934	0	-	178222541	178222934	789624	6	81,131,90,155,191,83,	0,1083,2906,3386,10465,10962,
#Partially deleted in new
chr5	178222475	178230073	chr5:178222475-178230073	0	-	178223426	178230073	789624	6	105,83,132,114,75,134,	0,376,844,2140,2879,7464,
#Deleted in new
chr5	178223387	178224496	chr5:178223387-178224496	0	-	178223387	178223387	8553170	2	558,49,	0,1060,
#Partially deleted in new
chr5	178224330	178230049	chr5:178224330-178230049	0	-	178224330	178224330	8553170	3	399,75,110,	0,1024,5609,
#Partially deleted in new
chr5	178224448	178232630	chr5:178224448-178232630	0	-	178224448	178232550	789624	6	116,88,75,160,161,139,	0,193,906,5491,7220,8043,
#Partially deleted in new
chr5	178224511	178230306	chr5:178224511-178230306	0	-	178224511	178224511	8553170	4	53,88,75,367,	0,130,843,5428,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	178226465	178232541	chr5:178226465-178232541	0	-	178226465	178226465	8553170	4	233,160,119,50,	0,3474,4939,6026,
#Partially deleted in new
chr5	178228124	178232571	chr5:178228124-178232571	1	-	178228555	178232550	789624	4	465,160,119,80,	0,1815,3280,4367,
#Partially deleted in new
chr5	178237617	178590555	chr5:178237617-178590555	3	-	178238697	178590197	789624	29	1083,39,87,54,27,54,63,27,57,63,90,45,54,78,45,63,45,27,27,36,117,27,27,27,27,8,45,67,652,	0,1523,4424,4723,8324,8636,8773,9908,10157,10574,11499,12443,14926,17331,18735,19248,19905,22103,24104,24599,25590,29689,31112,32719,50706,52744,69257,323064,352286,
#Partially deleted in new
chr5	178237619	178306934	chr5:178237619-178306934	1	-	178238697	178270363	789624	25	1081,39,87,54,27,54,63,27,57,63,90,45,54,78,45,63,45,27,27,36,117,27,27,36,60,	0,1521,4422,4721,8322,8634,8771,9906,10155,10572,11497,12441,14924,17329,18733,19246,19903,22101,24102,24597,25588,29687,31110,32717,69255,
#Partially deleted in new
chr5	178263207	178265834	chr5:178263207-178265834	0	-	178263207	178265726	789624	2	117,180,	0,2447,
#Deleted in new
chr5	178344842	178345316	chr5:178344842-178345316	7	+	178344842	178344842	16724991	1	474,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	178350866	178352250	chr5:178350866-178352250	3	+	178350866	178350866	8553170	2	333,333,	0,1051,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	178377923	178378220	chr5:178377923-178378220	3	+	178377923	178377923	8553170	1	297,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	178438680	178443094	chr5:178438680-178443094	3	-	178438680	178438680	8553170	2	1289,169,	0,4245,
#Partially deleted in new
chr5	178602663	178627114	chr5:178602663-178627114	3	-	178603616	178623416	789624	13	1094,91,80,83,130,95,167,117,67,91,223,161,169,	0,1180,2639,5712,9752,10132,10809,11063,14218,14680,15892,20592,24282,
#Partially deleted in new
chr5	178602663	178627088	chr5:178602663-178627088	0	-	178602663	178602663	8553170	13	1094,91,80,83,130,95,167,117,67,1435,59,161,143,	0,1180,2639,5712,9752,10132,10809,11063,14218,14680,17174,20592,24282,
#Partially deleted in new
chr5	178602664	178627053	chr5:178602664-178627053	1	-	178603616	178623416	789624	11	1093,55,5,95,167,117,67,91,223,161,108,	0,1179,1265,10131,10808,11062,14217,14679,15891,20591,24281,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr5	178603167	178627055	chr5:178603167-178627055	0	-	178616900	178623416	789624	13	590,91,80,41,83,130,95,167,117,67,223,161,110,	0,676,2135,2657,5208,9248,9628,10305,10559,13714,15388,20088,23778,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	178603269	178617388	chr5:178603269-178617388	0	-	178603269	178603269	8553170	6	2113,130,95,167,117,507,	0,9146,9526,10203,10457,13612,
#Partially deleted in new
chr5	178603269	178627029	chr5:178603269-178627029	0	-	178622458	178623416	789624	15	488,91,80,83,130,95,167,117,67,91,223,836,67,161,84,	0,574,2033,5106,9146,9526,10203,10457,13612,14074,15286,16568,19123,19986,23676,
#Partially deleted in new
chr5	178603271	178627041	chr5:178603271-178627041	0	-	178603271	178603271	8553170	12	486,91,80,83,130,95,167,117,1897,59,161,96,	0,572,2031,5104,9144,9524,10201,10455,13610,16566,19984,23674,
#Partially deleted in new
chr5	178603588	178627001	chr5:178603588-178627001	1	-	178603616	178623416	789624	11	169,53,7,95,167,117,67,91,223,161,56,	0,255,8950,9207,9884,10138,13293,13755,14967,19667,23357,
#Deleted in new
chr5	178616881	178620119	chr5:178616881-178620119	0	-	178616881	178616881	8553170	3	67,223,282,	0,1674,2956,
#Partially deleted in new
chr5	178617070	178627054	chr5:178617070-178627054	0	-	178617070	178617070	8553170	4	364,223,161,109,	0,1485,6185,9875,
#Partially deleted in new
chr5	178617696	178630615	chr5:178617696-178630615	0	-	178617696	178617696	8553170	3	1082,161,62,	0,5559,12857,
#Partially deleted in new
chr5	178617730	178627052	chr5:178617730-178627052	0	-	178617730	178617730	8553170	3	1048,161,107,	0,5525,9215,
#Partially deleted in new
chr5	178618693	178627112	chr5:178618693-178627112	0	-	178620564	178623416	789624	4	85,836,161,167,	0,1144,4562,8252,
#Deleted in new
chr5	178619727	178619998	chr5:178619727-178619998	3	-	178619727	178619727	8553170	1	271,	0,
#Deleted in new
chr5	178621808	178623339	chr5:178621808-178623339	0	-	178621808	178621808	8553170	2	651,84,	0,1447,
#Partially deleted in new
chr5	178621811	178627030	chr5:178621811-178627030	1	-	178623251	178623416	789624	2	1605,85,	0,5134,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	178694604	178729335	chr5:178694604-178729335	3	-	178707041	178729022	789624	8	343,312,85,110,234,96,127,346,	0,682,1492,2981,12334,30771,32394,34385,
#Partially deleted in new
chr5	178694604	178697695	chr5:178694604-178697695	3	-	178694708	178697591	8553170	4	343,312,85,110,	0,682,1492,2981,
#Partially deleted in new
chr5	178711591	178730702	chr5:178711591-178730702	3	-	178712059	178729022	789624	5	2030,96,127,84,147,	0,13784,15407,17398,18964,
#Partially deleted in new
chr5	178713472	178729383	chr5:178713472-178729383	0	-	178713472	178729022	789624	4	149,96,127,394,	0,11903,13526,15517,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	178725375	178730659	chr5:178725375-178730659	0	-	178726186	178729022	789624	5	96,153,127,84,104,	0,699,1623,3614,5180,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	178764860	178818435	chr5:178764860-178818435	7	-	178764860	178764860	16724991	11	1315,206,195,203,51,70,135,81,113,111,342,	0,2269,3609,7568,9637,10406,11281,32670,46313,50037,53233,
#Partially deleted in new
chr5	178767203	178797611	chr5:178767203-178797611	5	-	178767203	178767203	16724991	11	132,203,51,70,127,114,96,30,67,124,81,	0,5225,7294,8063,13883,15054,19486,19702,19864,26110,30327,
#Deleted in new
chr5	178825381	178825571	chr5:178825381-178825571	7	+	178825381	178825381	16724991	1	190,	0,
#Deleted in new
chr5	178840096	178841134	chr5:178840096-178841134	7	+	178840096	178840096	16724991	1	1038,	0,
#Deleted in new
chr5	178842027	178842235	chr5:178842027-178842235	7	-	178842027	178842027	16724991	1	208,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	178859952	178885028	chr5:178859952-178885028	3	+	178861047	178884291	789624	5	175,84,127,96,2320,	0,1044,6291,7023,22756,
#Partially deleted in new
chr5	178860686	178882854	chr5:178860686-178882854	0	+	178861047	178882854	789624	4	394,127,96,146,	0,5557,6289,22022,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	178883864	178888122	chr5:178883864-178888122	0	+	178883864	178883864	8553170	3	654,124,502,	0,1749,3756,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	178884166	178888122	chr5:178884166-178888122	0	+	178884166	178884166	8553170	3	352,120,514,	0,1447,3442,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	178884714	178884879	chr5:178884714-178884879	3	+	178884714	178884714	8553170	1	165,	0,
#Partially deleted in new
chr5	178895893	178933212	chr5:178895893-178933212	3	+	178931313	178932699	789624	5	81,136,90,146,1976,	0,16690,17088,20671,35343,
#Partially deleted in new
chr5	178895897	178931382	chr5:178895897-178931382	0	+	178931313	178931382	789624	5	77,136,93,146,146,	0,16686,17081,20667,35339,
#Partially deleted in new
chr5	178895914	178931339	chr5:178895914-178931339	0	+	178931313	178931339	789624	5	60,130,93,146,103,	0,16675,17064,20650,35322,
#Deleted in new
chr5	178909709	178910609	chr5:178909709-178910609	7	-	178909709	178909709	16724991	1	900,	0,
#Deleted in new
chr5	178922063	178922716	chr5:178922063-178922716	7	+	178922063	178922063	16724991	1	653,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	178938676	178939223	chr5:178938676-178939223	3	-	178938676	178938676	8553170	1	547,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	178941190	178966433	chr5:178941190-178966433	3	+	178942791	178965973	789624	5	196,140,127,90,1779,	0,1494,5168,5706,23464,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	178941222	178966217	chr5:178941222-178966217	1	+	178942791	178965973	789624	5	222,140,127,90,1563,	0,1462,5136,5674,23432,
#Partially deleted in new
chr5	178969389	178990116	chr5:178969389-178990116	3	+	178969389	178969389	8553170	2	304,370,	0,20357,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	178977586	178984068	chr5:178977586-178984068	0	-	178977586	178977586	8553170	2	4268,1159,	0,5323,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr5	178978326	178995123	chr5:178978326-178995123	1	-	178981656	178994944	789624	10	3528,312,624,146,201,141,155,136,217,683,	0,4583,7803,8511,10608,10938,12265,13097,13540,16114,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	178978326	178995319	chr5:178978326-178995319	1	-	178981656	178994944	789624	11	3528,312,624,146,201,141,155,136,217,520,44,	0,4583,7803,8511,10608,10938,12265,13097,13540,16114,16949,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	178978326	178996206	chr5:178978326-178996206	3	-	178981656	178994944	8553170	12	3528,312,624,146,201,141,155,136,217,520,54,311,	0,4583,7803,8511,10608,10938,12265,13097,13540,16114,16949,17569,
#Partially deleted in new
chr5	178982806	178986252	chr5:178982806-178986252	0	-	178982806	178982806	8553170	2	415,123,	0,3323,
#Partially deleted in new
chr5	178986442	178988972	chr5:178986442-178988972	0	-	178986442	178986442	8553170	2	541,38,	0,2492,
#Deleted in new
chr5	178997968	178998815	chr5:178997968-178998815	7	-	178997968	178997968	16724991	1	847,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	179023751	179035064	chr5:179023751-179035064	3	+	179025004	179033640	789624	5	153,68,127,96,2860,	0,1218,3721,4280,8453,
#Partially deleted in new
chr5	179023803	179032321	chr5:179023803-179032321	1	+	179025004	179032238	789624	5	101,68,161,96,117,	0,1166,3635,4228,8401,
#Partially deleted in new
chr5	179023803	179032352	chr5:179023803-179032352	0	+	179025004	179032352	789624	5	114,68,127,96,148,	0,1166,3669,4228,8401,
#Partially deleted in new
chr5	179024437	179027562	chr5:179024437-179027562	0	+	179025004	179027562	789624	2	600,90,	0,3035,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	179060414	179083537	chr5:179060414-179083537	3	+	179062068	179080097	789624	5	252,81,127,96,4855,	0,1600,16030,16656,18268,
#Deleted in new
chr5	179082679	179083194	chr5:179082679-179083194	7	-	179082679	179082679	16724991	1	515,	0,
#Partially deleted in new
chr5	179110850	179345430	chr5:179110850-179345430	3	-	179113866	179345328	789624	22	3474,90,130,208,133,160,167,81,124,134,176,146,114,133,144,106,157,84,203,154,395,241,	0,10810,11793,14122,15147,17108,19081,21379,21926,25058,26918,29039,41291,42640,43198,43963,47872,70221,96662,162060,232916,234339,
#Partially deleted in new
chr5	179114063	179121854	chr5:179114063-179121854	0	-	179114063	179114063	8553170	2	261,194,	0,7597,
#Partially deleted in new
chr5	179114288	179122839	chr5:179114288-179122839	0	-	179114288	179114288	8553170	3	36,90,196,	0,7372,8355,
#Partially deleted in new
chr5	179120171	179345430	chr5:179120171-179345430	1	-	179121553	179345328	789624	21	1579,130,208,133,160,167,81,124,134,176,146,114,133,144,106,157,84,203,154,395,241,	0,2472,4801,5826,7787,9760,12058,12605,15737,17597,19718,31970,33319,33877,34642,38551,60900,87341,152739,223595,225018,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	179150887	179345430	chr5:179150887-179345430	1	-	179151128	179345328	789624	11	313,114,133,144,106,157,84,203,154,395,241,	0,1254,2603,3161,3926,7835,30184,56625,122023,192879,194302,
#Deleted in new
chr5	179377504	179378865	chr5:179377504-179378865	3	+	179377504	179377504	8553170	2	200,160,	0,1201,
#Deleted in new
chr5	179377530	179378761	chr5:179377530-179378761	3	-	179377530	179377530	8553170	2	398,226,	0,1005,
#Deleted in new
chr5	179385818	179385992	chr5:179385818-179385992	7	-	179385818	179385818	16724991	1	174,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	179455414	179456095	chr5:179455414-179456095	3	+	179455414	179455414	8553170	2	403,158,	0,523,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	179492075	179492157	chr5:179492075-179492157	3	-	179492075	179492075	8553170	1	82,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	179503321	179515579	chr5:179503321-179515579	3	-	179503321	179503321	8553170	2	419,116,	0,12142,
#Deleted in new
chr5	179522456	179525074	chr5:179522456-179525074	7	+	179522456	179522456	16724991	4	248,58,61,775,	0,960,1563,1843,
#Deleted in new
chr5	179527223	179527513	chr5:179527223-179527513	7	-	179527223	179527223	16724991	1	290,	0,
#Partially deleted in new
chr5	179550557	179610026	chr5:179550557-179610026	1	+	179550569	179609519	0	18	322,174,118,102,124,62,66,70,102,117,168,98,120,130,95,49,78,651,	0,9467,11989,16903,18744,26517,30389,35238,38988,41067,42920,44308,46004,48134,51334,55318,57024,58818,
#Partially deleted in new
chr5	179550835	179602571	chr5:179550835-179602571	0	+	179550835	179589613	789624	16	44,174,118,102,124,62,66,70,145,102,117,168,98,120,130,680,	0,9189,11711,16625,18466,26239,30111,34960,35495,38710,40789,42642,44030,45726,47856,51056,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	179550837	179569382	chr5:179550837-179569382	0	+	179550837	179569382	789624	6	42,141,174,118,102,81,	0,4812,9187,11709,16623,18464,
#Partially deleted in new
chr5	179559691	179610012	chr5:179559691-179610012	3	+	179560038	179609519	0	18	144,174,118,102,124,62,66,70,102,117,168,98,120,130,95,49,78,637,	0,333,2855,7769,9610,17383,21255,26104,29854,31933,33786,35174,36870,39000,42200,46184,47890,49684,
#Partially deleted in new
chr5	179559691	179610011	chr5:179559691-179610011	1	+	179560038	179609519	0	17	507,118,102,124,62,66,70,102,117,168,98,120,130,95,49,78,636,	0,2855,7769,9610,17383,21255,26104,29854,31933,33786,35174,36870,39000,42200,46184,47890,49684,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	179559691	179562922	chr5:179559691-179562922	0	+	179559691	179559691	8553170	3	144,174,376,	0,333,2855,
#Partially deleted in new
chr5	179559740	179567562	chr5:179559740-179567562	0	+	179559740	179559740	8553170	2	458,102,	0,7720,
#Partially deleted in new
chr5	179562630	179594898	chr5:179562630-179594898	0	+	179562630	179594898	789624	9	34,102,124,62,70,102,117,168,33,	0,4830,6671,14444,23165,26915,28994,30847,32235,
#Partially deleted in new
chr5	179572155	179572741	chr5:179572155-179572741	7	+	179572155	179572155	16724991	1	586,	0,
#Partially deleted in new
chr5	179577112	179607628	chr5:179577112-179607628	0	+	179577112	179607628	789624	11	24,66,70,117,168,98,120,130,95,49,47,	0,3834,8683,14512,16365,17753,19449,21579,24779,28763,30469,
#Partially deleted in new
chr5	179589362	179593613	chr5:179589362-179593613	0	+	179589362	179589362	8553170	3	285,117,136,	0,2262,4115,
#Duplicated in new
chr5	179595903	179603741	chr5:179595903-179603741	3	-	179595903	179595903	789624	9	690,140,103,122,151,26,203,396,135,	0,918,2349,3364,3581,4169,6160,6473,7703,
#Partially deleted in new
chr5	179596559	179606584	chr5:179596559-179606584	0	+	179596559	179596559	8553170	4	122,130,95,709,	0,2132,5332,9316,
#Partially deleted in new
chr5	179606902	179609472	chr5:179606902-179609472	0	+	179606902	179606902	8553170	2	757,97,	0,2473,
#Partially deleted in new
chr5	179607265	179609970	chr5:179607265-179609970	0	+	179607265	179607265	8553170	4	220,78,181,595,	0,316,1019,2110,
#Partially deleted in new
chr5	179614177	179623710	chr5:179614177-179623710	1	-	179615545	179623133	0	14	782,50,93,90,60,136,134,72,179,139,144,156,128,116,	0,1368,1948,2691,2873,3336,3621,3811,3967,5091,6714,7064,8859,9417,
#Partially deleted in new
chr5	179614178	179624669	chr5:179614178-179624669	3	-	179615545	179623133	0	13	781,50,93,90,60,136,134,72,179,139,144,156,1633,	0,1367,1947,2690,2872,3335,3620,3810,3966,5090,6713,7063,8858,
#Partially deleted in new
chr5	179614178	179623721	chr5:179614178-179623721	1	-	179615545	179623133	0	14	781,50,93,90,60,136,134,72,179,139,144,156,128,86,	0,1367,1947,2690,2872,3335,3620,3810,3966,5090,6713,7063,8858,9457,
#Deleted in new
chr5	179614178	179618899	chr5:179614178-179618899	0	-	179614178	179614178	8553170	7	781,50,985,136,134,72,755,	0,1367,1947,3335,3620,3810,3966,
#Partially deleted in new
chr5	179614179	179623671	chr5:179614179-179623671	0	-	179614179	179614179	8553170	13	780,50,93,90,60,136,134,72,179,139,506,128,77,	0,1366,1946,2689,2871,3334,3619,3809,3965,5089,6712,8857,9415,
#Deleted in new
chr5	179614179	179620032	chr5:179614179-179620032	0	-	179614179	179614179	8553170	4	3470,134,72,1888,	0,3619,3809,3965,
#Partially deleted in new
chr5	179614180	179623168	chr5:179614180-179623168	1	-	179614840	179623133	789624	12	779,93,90,60,136,134,72,179,139,144,156,132,	0,1945,2688,2870,3333,3618,3808,3964,5088,6711,7061,8856,
#Partially deleted in new
chr5	179614180	179623169	chr5:179614180-179623169	1	-	179615545	179623133	789624	12	779,50,93,90,136,134,72,179,139,144,156,133,	0,1365,1945,2840,3333,3618,3808,3964,5088,6711,7061,8856,
#Partially deleted in new
chr5	179614180	179623169	chr5:179614180-179623169	0	-	179618165	179623133	789624	12	779,50,93,60,60,136,134,72,179,144,156,133,	0,1365,1945,2718,2870,3333,3618,3808,3964,6711,7061,8856,
#Deleted in new
chr5	179614518	179617581	chr5:179614518-179617581	0	-	179615545	179617581	789624	6	441,50,93,90,51,68,	0,1027,1607,2350,2541,2995,
#Deleted in new
chr5	179614523	179616287	chr5:179614523-179616287	0	-	179614523	179614523	8553170	2	436,162,	0,1602,
#Deleted in new
chr5	179614685	179618043	chr5:179614685-179618043	0	-	179615545	179618043	789624	7	274,50,93,90,136,134,55,	0,860,1440,2335,2828,3113,3303,
#Deleted in new
chr5	179614876	179617634	chr5:179614876-179617634	0	-	179614876	179614876	8553170	4	83,93,242,121,	0,1249,1992,2637,
#Deleted in new
chr5	179614889	179618453	chr5:179614889-179618453	0	-	179614889	179614889	8553170	7	70,50,93,781,134,72,309,	0,656,1236,1979,2909,3099,3255,
#Deleted in new
chr5	179615559	179621335	chr5:179615559-179621335	0	-	179618165	179621335	789624	8	36,93,90,136,113,179,144,94,	0,566,1461,1954,2239,2585,5332,5682,
#Deleted in new
chr5	179616140	179616924	chr5:179616140-179616924	0	-	179616140	179616924	789624	2	78,65,	0,719,
#Deleted in new
chr5	179616157	179618515	chr5:179616157-179618515	0	-	179616157	179616157	8553170	6	61,90,60,136,262,371,	0,711,893,1356,1641,1987,
#Partially deleted in new
chr5	179616763	179623669	chr5:179616763-179623669	0	-	179616763	179616763	8553170	9	347,136,134,72,179,144,156,128,75,	0,750,1035,1225,1381,4128,4478,6273,6831,
#Deleted in new
chr5	179616868	179620959	chr5:179616868-179620959	0	-	179616868	179620959	789624	8	90,60,136,134,72,179,92,68,	0,182,645,930,1120,1276,2400,4023,
#Deleted in new
chr5	179616873	179618301	chr5:179616873-179618301	0	-	179616873	179618301	789624	5	85,136,134,72,157,	0,640,925,1115,1271,
#Partially deleted in new
chr5	179617816	179623671	chr5:179617816-179623671	0	-	179617816	179623133	789624	5	95,144,156,128,36,	0,3075,3425,5220,5819,
#Partially deleted in new
chr5	179618044	179623670	chr5:179618044-179623670	0	-	179621950	179623133	789624	7	16,179,144,156,134,128,35,	0,100,2847,3197,3798,4992,5591,
#Deleted in new
chr5	179618143	179619708	chr5:179618143-179619708	0	-	179618143	179618143	8553170	2	180,440,	0,1125,
#Deleted in new
chr5	179618160	179621461	chr5:179618160-179621461	0	-	179618160	179618160	8553170	3	163,144,220,	0,2731,3081,
#Partially deleted in new
chr5	179618204	179623698	chr5:179618204-179623698	0	-	179618204	179623133	789624	5	119,144,156,128,63,	0,2687,3037,4832,5431,
#Partially deleted in new
chr5	179618207	179623670	chr5:179618207-179623670	0	-	179618207	179623133	789624	5	116,144,156,151,35,	0,2684,3034,4829,5428,
#Partially deleted in new
chr5	179618217	179624669	chr5:179618217-179624669	0	-	179618217	179623133	789624	5	106,139,156,128,1034,	0,1051,3024,4819,5418,
#Partially deleted in new
chr5	179618223	179624584	chr5:179618223-179624584	0	-	179618223	179623133	789624	6	100,139,144,156,128,488,	0,1045,2668,3018,4813,5873,
#Partially deleted in new
chr5	179618235	179623698	chr5:179618235-179623698	0	-	179618235	179623133	789624	5	88,144,156,128,104,	0,2656,3006,4801,5359,
#Partially deleted in new
chr5	179618238	179623669	chr5:179618238-179623669	0	-	179618238	179623133	789624	5	85,139,144,128,34,	0,1030,2653,4798,5397,
#Deleted in new
chr5	179619100	179621370	chr5:179619100-179621370	0	-	179619100	179619100	8553170	3	307,144,129,	0,1791,2141,
#Deleted in new
chr5	179619272	179621511	chr5:179619272-179621511	0	-	179619272	179621263	789624	3	135,144,270,	0,1619,1969,
#Partially deleted in new
chr5	179619300	179623671	chr5:179619300-179623671	0	-	179619300	179623133	789624	5	107,144,156,151,36,	0,1591,1941,3736,4335,
#Partially deleted in new
chr5	179619314	179624600	chr5:179619314-179624600	0	-	179619314	179623133	789624	5	93,144,156,128,284,	0,1577,1927,3722,5002,
#Partially deleted in new
chr5	179619468	179623164	chr5:179619468-179623164	0	-	179619468	179619468	8553170	4	569,144,156,128,	0,1423,1773,3568,
#Partially deleted in new
chr5	179620674	179623710	chr5:179620674-179623710	0	-	179620674	179620674	8553170	4	361,156,128,116,	0,567,2362,2920,
#Deleted in new
chr5	179620732	179621686	chr5:179620732-179621686	0	-	179620732	179620732	8553170	2	303,445,	0,509,
#Partially deleted in new
chr5	179620772	179623670	chr5:179620772-179623670	0	-	179620772	179620772	8553170	4	263,156,128,35,	0,469,2264,2863,
#Partially deleted in new
chr5	179620813	179623668	chr5:179620813-179623668	0	-	179620813	179620813	8553170	4	222,27,128,74,	0,557,2223,2781,
#Partially deleted in new
chr5	179620896	179623707	chr5:179620896-179623707	0	-	179620896	179623133	789624	4	139,156,128,427,	0,345,2140,2384,
#Partially deleted in new
chr5	179620942	179634784	chr5:179620942-179634784	0	-	179620942	179623133	789624	5	93,156,128,93,336,	0,299,2094,13122,13506,
#Partially deleted in new
chr5	179621010	179623712	chr5:179621010-179623712	0	-	179621010	179621010	8553170	3	387,128,77,	0,2026,2625,
#Partially deleted in new
chr5	179621241	179624584	chr5:179621241-179624584	0	-	179621241	179623133	789624	4	156,128,138,268,	0,1795,2736,3075,
#Partially deleted in new
chr5	179621253	179624411	chr5:179621253-179624411	0	-	179621950	179623133	789624	4	144,134,128,95,	0,589,1783,3063,
#Partially deleted in new
chr5	179621346	179624600	chr5:179621346-179624600	0	-	179621346	179623133	789624	4	51,128,106,284,	0,1690,2750,2970,
#Partially deleted in new
chr5	179621950	179623133	chr5:179621950-179623133	1	-	179621950	179623133	789624	2	26,97,	0,1086,
#Partially deleted in new
chr5	179622848	179623646	chr5:179622848-179623646	0	-	179622848	179622848	8553170	2	316,52,	0,746,
#Partially deleted in new
chr5	179622951	179623670	chr5:179622951-179623670	0	-	179622951	179622951	8553170	2	213,35,	0,684,
#Partially deleted in new
chr5	179623048	179634440	chr5:179623048-179634440	0	-	179623048	179623133	789624	2	116,376,	0,11016,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	179629150	179629410	chr5:179629150-179629410	3	+	179629150	179629150	8553170	1	260,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	179633891	179634473	chr5:179633891-179634473	0	-	179633891	179633891	8553170	2	266,25,	0,557,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	179641543	179645007	chr5:179641543-179645007	0	-	179641543	179641543	8553170	2	1667,1578,	0,1886,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	179641543	179645046	chr5:179641543-179645046	3	-	179642338	179645020	789624	6	335,164,342,61,58,248,	0,782,1325,1886,2485,3255,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	179641545	179645007	chr5:179641545-179645007	0	-	179641545	179641545	8553170	5	333,885,61,58,209,	0,780,1884,2483,3253,
#Deleted in new
chr5	179642894	179645007	chr5:179642894-179645007	0	-	179642894	179642894	8553170	4	316,61,58,63,	0,535,1134,2050,
#Deleted in new
chr5	179642934	179645007	chr5:179642934-179645007	0	-	179644217	179644978	789624	4	276,61,225,209,	0,495,1094,1864,
#Deleted in new
chr5	179643724	179645007	chr5:179643724-179645007	0	-	179643724	179643724	8553170	2	362,209,	0,1074,
#Deleted in new
chr5	179644330	179645007	chr5:179644330-179645007	0	-	179644330	179644330	8553170	2	511,63,	0,614,
#Deleted in new
chr5	179651283	179652457	chr5:179651283-179652457	7	+	179651283	179651283	16724991	3	69,342,164,	0,289,1010,
#Deleted in new
chr5	179651296	179652290	chr5:179651296-179652290	5	+	179651296	179651296	16724991	2	54,717,	0,277,
#Partially deleted in new
chr5	179657761	179658481	chr5:179657761-179658481	1	+	179657761	179657761	8553170	2	336,93,	0,627,
#Partially deleted in new
chr5	179658264	179664430	chr5:179658264-179664430	0	+	179658264	179658264	8553170	2	217,108,	0,6058,
#Partially deleted in new
chr5	179678582	179680974	chr5:179678582-179680974	3	-	179678582	179680918	789624	2	683,102,	0,2290,
#Partially deleted in new
chr5	179678627	179708366	chr5:179678627-179708366	0	+	179705681	179708366	789624	5	150,174,74,59,128,	0,27051,27630,28504,29611,
#Partially deleted in new
chr5	179679031	179694649	chr5:179679031-179694649	7	+	179679031	179679031	16724991	2	253,344,	0,15274,
#Deleted in new
chr5	179694196	179694768	chr5:179694196-179694768	5	+	179694196	179694196	16724991	1	572,	0,
#Partially deleted in new
chr5	179698405	179708336	chr5:179698405-179708336	0	+	179705681	179708336	789624	5	420,174,74,59,98,	0,7273,7852,8726,9833,
#Partially deleted in new
chr5	179698416	179728907	chr5:179698416-179728907	1	+	179705681	179728644	789624	15	187,174,74,59,142,82,193,190,114,157,216,120,127,80,317,	0,7262,7841,8715,9822,10561,11456,17688,21251,21987,24387,25243,26240,28263,30174,
#Partially deleted in new
chr5	179698905	179730925	chr5:179698905-179730925	1	+	179705681	179728644	789624	15	197,174,74,59,142,82,193,190,114,157,216,120,127,80,2335,	0,6773,7352,8226,9333,10072,10967,17199,20762,21498,23898,24754,25751,27774,29685,
#Partially deleted in new
chr5	179698905	179730925	chr5:179698905-179730925	3	+	179705681	179728644	789624	15	144,174,74,59,142,82,193,190,114,157,216,120,127,80,2335,	0,6773,7352,8226,9333,10072,10967,17199,20762,21498,23898,24754,25751,27774,29685,
#Partially deleted in new
chr5	179698943	179709036	chr5:179698943-179709036	0	+	179705681	179709036	789624	6	62,174,74,59,142,59,	0,6735,7314,8188,9295,10034,
#Partially deleted in new
chr5	179698955	179706322	chr5:179698955-179706322	0	+	179705681	179706322	789624	4	147,196,174,65,	0,619,6723,7302,
#Partially deleted in new
chr5	179698967	179709059	chr5:179698967-179709059	0	+	179705681	179708253	789624	4	135,174,142,82,	0,6711,9271,10010,
#Partially deleted in new
chr5	179698976	179720494	chr5:179698976-179720494	0	+	179705681	179720494	789624	8	73,126,131,82,193,190,114,91,	0,6702,9273,10001,10896,17128,20691,21427,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	179698976	179708256	chr5:179698976-179708256	0	+	179705681	179708256	789624	6	126,276,174,74,59,18,	0,5178,6702,7281,8155,9262,
#Partially deleted in new
chr5	179698983	179710062	chr5:179698983-179710062	0	+	179708258	179710062	789624	5	119,59,142,82,190,	0,8148,9255,9994,10889,
#Partially deleted in new
chr5	179698987	179728682	chr5:179698987-179728682	0	+	179705681	179708284	789624	14	115,174,74,142,82,193,190,114,157,216,120,127,80,92,	0,6691,7270,9251,9990,10885,17117,20680,21416,23816,24672,25669,27692,29603,
#Partially deleted in new
chr5	179699025	179709949	chr5:179699025-179709949	0	+	179699025	179709949	789624	6	77,74,59,142,82,77,	0,7232,8106,9213,9952,10847,
#Partially deleted in new
chr5	179706306	179716241	chr5:179706306-179716241	0	+	179706306	179706306	8553170	6	25,59,142,82,147,137,	0,825,1932,2671,3612,9798,
#Partially deleted in new
chr5	179708286	179716201	chr5:179708286-179716201	0	+	179708286	179716201	789624	5	94,82,193,102,97,	0,691,1586,7612,7818,
#Partially deleted in new
chr5	179709693	179716281	chr5:179709693-179716281	0	+	179709693	179709693	8553170	2	372,177,	0,6411,
#Partially deleted in new
chr5	179723477	179726735	chr5:179723477-179726735	0	+	179723477	179723477	8553170	3	302,127,56,	0,1179,3202,
#Deleted in new
chr5	179726704	179729649	chr5:179726704-179729649	0	+	179726704	179726704	8553170	2	55,290,	0,2655,
#Partially deleted in new
chr5	179732849	179777286	chr5:179732849-179777286	3	+	179733112	179774877	0	5	578,1416,240,97,3392,	0,32476,36000,38297,41045,
#Partially deleted in new
chr5	179768851	179773951	chr5:179768851-179773951	0	+	179768851	179768851	8553170	3	238,97,57,	0,2295,5043,
#Partially deleted in new
chr5	179770927	179774468	chr5:179770927-179774468	0	+	179770927	179770927	8553170	2	316,574,	0,2967,
#Deleted in new
chr5	179793979	179796647	chr5:179793979-179796647	0	+	179793979	179793979	8553170	4	159,273,82,395,	0,1604,1961,2273,
#Deleted in new
chr5	179793984	179796444	chr5:179793984-179796444	0	+	179794080	179795854	789624	5	154,83,71,82,192,	0,1616,1801,1956,2268,
#Deleted in new
chr5	179793985	179796512	chr5:179793985-179796512	3	+	179794080	179796394	0	5	153,100,71,82,260,	0,1598,1800,1955,2267,
#Deleted in new
chr5	179793992	179796510	chr5:179793992-179796510	1	+	179794080	179796394	789624	3	146,82,258,	0,1948,2260,
#Deleted in new
chr5	179794012	179796021	chr5:179794012-179796021	0	+	179794012	179794012	8553170	2	126,438,	0,1571,
#Deleted in new
chr5	179794032	179796159	chr5:179794032-179796159	1	+	179794080	179796026	789624	4	106,100,71,219,	0,1551,1753,1908,
#Deleted in new
chr5	179795307	179796314	chr5:179795307-179796314	0	+	179795307	179795307	8553170	4	33,273,82,62,	0,276,633,945,
#Deleted in new
chr5	179795554	179796375	chr5:179795554-179796375	0	+	179795554	179795554	8553170	3	302,82,123,	0,386,698,
#Deleted in new
chr5	179797596	179806934	chr5:179797596-179806934	3	-	179798044	179806583	789624	15	472,113,88,79,194,108,131,115,76,114,47,134,141,186,448,	0,568,750,916,1331,1606,1909,2357,2587,2887,3310,3737,3957,4187,8890,
#Deleted in new
chr5	179797596	179802998	chr5:179797596-179802998	1	-	179798044	179802111	789624	14	472,113,88,79,194,108,131,115,76,114,47,134,141,1215,	0,568,750,916,1331,1606,1909,2357,2587,2887,3310,3737,3957,4187,
#Deleted in new
chr5	179797596	179801367	chr5:179797596-179801367	0	-	179798044	179801367	789624	12	472,113,88,79,194,105,131,115,76,114,47,34,	0,568,750,916,1331,1606,1909,2357,2587,2887,3310,3737,
#Deleted in new
chr5	179797609	179801909	chr5:179797609-179801909	0	-	179798006	179801909	789624	12	459,113,88,79,194,115,76,114,47,134,141,126,	0,555,737,903,1318,2344,2574,2874,3297,3724,3944,4174,
#Deleted in new
chr5	179797670	179799636	chr5:179797670-179799636	0	-	179798044	179799636	789624	7	398,113,88,64,194,108,131,	0,494,676,842,1257,1532,1835,
#Deleted in new
chr5	179797883	179799576	chr5:179797883-179799576	0	-	179797883	179797883	8553170	6	185,113,88,194,108,71,	0,281,620,1044,1319,1622,
#Deleted in new
chr5	179797945	179800939	chr5:179797945-179800939	0	-	179798006	179800939	789624	10	123,113,88,79,194,48,115,76,114,33,	0,219,401,567,982,1257,2008,2238,2538,2961,
#Deleted in new
chr5	179798105	179798835	chr5:179798105-179798835	0	-	179798105	179798105	8553170	3	172,88,323,	0,241,407,
#Deleted in new
chr5	179798164	179800597	chr5:179798164-179800597	0	-	179798164	179800597	789624	8	113,88,79,248,131,115,76,114,	0,182,348,763,1341,1789,2019,2319,
#Deleted in new
chr5	179798164	179801389	chr5:179798164-179801389	0	-	179798164	179798164	8553170	10	113,88,64,57,48,115,76,114,47,56,	0,182,348,900,1038,1789,2019,2319,2742,3169,
#Deleted in new
chr5	179798277	179798346	chr5:179798277-179798346	3	-	179798277	179798277	5263520	1	69,	0,
#Deleted in new
chr5	179798406	179800945	chr5:179798406-179800945	0	-	179798406	179800945	789624	9	28,64,57,108,131,115,76,114,39,	0,106,658,796,1099,1547,1777,2077,2500,
#Deleted in new
chr5	179799295	179800997	chr5:179799295-179800997	0	-	179799295	179799295	8553170	6	15,131,115,76,114,91,	0,210,658,888,1188,1611,
#Deleted in new
chr5	179799505	179800589	chr5:179799505-179800589	0	-	179799505	179799505	8553170	3	563,76,106,	0,678,978,
#Deleted in new
chr5	179799511	179806334	chr5:179799511-179806334	0	-	179799511	179801456	789624	9	125,115,76,114,47,134,141,186,142,	0,442,672,972,1395,1822,2042,2272,6681,
#Deleted in new
chr5	179799723	179800431	chr5:179799723-179800431	0	-	179799723	179799723	8553170	2	345,248,	0,460,
#Deleted in new
chr5	179799979	179802115	chr5:179799979-179802115	0	-	179800948	179802111	789624	6	89,76,114,47,141,332,	0,204,504,927,1574,1804,
#Deleted in new
chr5	179800483	179803776	chr5:179800483-179803776	0	-	179800483	179800483	8553170	7	114,47,134,141,186,227,364,	0,423,850,1070,1300,2320,2929,
#Deleted in new
chr5	179800937	179806554	chr5:179800937-179806554	0	-	179801409	179806554	789624	5	16,134,139,186,68,	0,396,616,846,5549,
#Deleted in new
chr5	179801333	179806952	chr5:179801333-179806952	0	-	179801333	179801333	8553170	3	361,186,466,	0,450,5153,
#Deleted in new
chr5	179801374	179806330	chr5:179801374-179806330	0	-	179801374	179801374	8553170	4	93,166,186,147,	0,179,409,4809,
#Deleted in new
chr5	179801806	179806324	chr5:179801806-179806324	0	-	179801806	179801806	8553170	3	163,227,132,	0,997,4386,
#Deleted in new
chr5	179802312	179806305	chr5:179802312-179806305	0	-	179802312	179802312	8553170	2	718,113,	0,3880,
#Deleted in new
chr5	179802951	179805385	chr5:179802951-179805385	0	-	179802951	179802951	8553170	2	79,445,	0,1989,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	179806397	179813024	chr5:179806397-179813024	0	+	179806397	179806397	8553170	3	194,109,618,	0,5176,6009,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	179806407	179825226	chr5:179806407-179825226	0	+	179823004	179825226	789624	6	184,109,96,230,142,81,	0,5166,16550,17450,17774,18738,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	179807323	179813598	chr5:179807323-179813598	0	+	179807323	179807323	8553170	3	1104,109,1192,	0,4250,5083,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	179811614	179813641	chr5:179811614-179813641	0	+	179811614	179811614	8553170	2	68,1654,	0,373,
#Partially deleted in new
chr5	179818877	179824323	chr5:179818877-179824323	0	+	179823004	179824323	789624	4	160,96,230,142,	0,4080,4980,5304,
#Partially deleted in new
chr5	179818966	179823968	chr5:179818966-179823968	0	+	179818966	179818966	8553170	4	71,284,96,111,	0,1137,3991,4891,
#Partially deleted in new
chr5	179820606	179824287	chr5:179820606-179824287	0	+	179820606	179820606	8553170	4	100,96,230,106,	0,2351,3251,3575,
#Partially deleted in new
chr5	179820758	179838078	chr5:179820758-179838078	3	+	179820936	179836593	0	8	383,96,230,142,81,215,196,1643,	0,2199,3099,3423,4387,12273,12828,15677,
#Partially deleted in new
chr5	179820877	179824237	chr5:179820877-179824237	0	+	179820936	179823030	789624	4	264,28,230,56,	0,2148,2980,3304,
#Deleted in new
chr5	179820884	179821567	chr5:179820884-179821567	1	+	179820936	179821567	789624	2	257,17,	0,666,
#Partially deleted in new
chr5	179820904	179823939	chr5:179820904-179823939	0	+	179820936	179821567	789624	4	237,157,96,82,	0,646,2053,2953,
#Partially deleted in new
chr5	179820904	179824057	chr5:179820904-179824057	0	+	179820936	179824057	789624	3	237,165,200,	0,1984,2953,
#Partially deleted in new
chr5	179820920	179837218	chr5:179820920-179837218	1	+	179820936	179836657	789624	7	221,96,230,142,81,196,748,	0,2037,2937,3261,4225,12111,15550,
#Partially deleted in new
chr5	179822484	179837255	chr5:179822484-179837255	1	+	179823004	179836593	0	7	569,230,142,81,215,196,820,	0,1373,1697,2661,10547,11102,13951,
#Deleted in new
chr5	179823564	179824314	chr5:179823564-179824314	0	+	179823564	179823564	8553170	2	523,133,	0,617,
#Partially deleted in new
chr5	179823857	179833386	chr5:179823857-179833386	0	+	179823857	179823857	8553170	4	230,142,81,355,	0,324,1288,9174,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr5	179835132	179858860	chr5:179835132-179858860	0	-	179848014	179858796	789624	9	2072,126,88,158,76,89,80,60,130,	0,2627,5739,6774,9019,12845,18064,18245,23598,
#Partially deleted in new
chr5	179836633	179858806	chr5:179836633-179858806	1	-	179837177	179858796	789624	8	571,126,88,158,76,89,60,76,	0,1126,4238,5273,7518,11344,16744,22097,
#Partially deleted in new
chr5	179836801	179858797	chr5:179836801-179858797	1	-	179837177	179858796	789624	6	403,126,88,158,60,67,	0,958,4070,5105,16576,21929,
#Deleted in new
chr5	179837142	179838255	chr5:179837142-179838255	0	-	179837142	179837142	8553170	2	62,496,	0,617,
#Partially deleted in new
chr5	179837265	179858808	chr5:179837265-179858808	1	-	179837390	179858796	789624	5	620,88,158,60,78,	0,3606,4641,16112,21465,
#Partially deleted in new
chr5	179837273	179844221	chr5:179837273-179844221	0	-	179837273	179837273	8553170	3	606,65,70,	0,4726,6878,
#Partially deleted in new
chr5	179837275	179858887	chr5:179837275-179858887	3	-	179837390	179858796	789624	7	610,88,158,76,89,60,157,	0,3596,4631,6876,10702,16102,21455,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	179837275	179858808	chr5:179837275-179858808	1	-	179840829	179858796	789624	6	3684,158,76,89,60,78,	0,4631,6876,10702,16102,21455,
#Partially deleted in new
chr5	179837275	179858834	chr5:179837275-179858834	1	-	179837390	179841953	789624	6	610,88,158,76,60,104,	0,3596,4631,6876,16102,21455,
#Partially deleted in new
chr5	179837276	179842020	chr5:179837276-179842020	1	-	179837390	179837868	789624	4	576,32,88,114,	0,577,3595,4630,
#Partially deleted in new
chr5	179837526	179858844	chr5:179837526-179858844	0	-	179842030	179858796	789624	6	359,88,158,89,60,114,	0,3345,4380,10451,15851,21204,
#Partially deleted in new
chr5	179837692	179858817	chr5:179837692-179858817	1	-	179837739	179858796	789624	5	119,55,89,60,87,	0,6480,10285,15685,21038,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	179840239	179858846	chr5:179840239-179858846	0	-	179840239	179840239	8553170	4	720,158,60,116,	0,1667,13138,18491,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	179840589	179844325	chr5:179840589-179844325	0	-	179840589	179840589	8553170	3	370,158,174,	0,1317,3562,
#Partially deleted in new
chr5	179840712	179858838	chr5:179840712-179858838	0	-	179842030	179858796	789624	5	247,158,89,60,108,	0,1194,7265,12665,18018,
#Partially deleted in new
chr5	179840808	179858844	chr5:179840808-179858844	0	-	179844197	179858796	789624	5	151,158,76,60,114,	0,1098,3343,12569,17922,
#Partially deleted in new
chr5	179840920	179858839	chr5:179840920-179858839	0	-	179848014	179858796	789624	6	39,158,89,80,60,109,	0,986,7057,12276,12457,17810,
#Partially deleted in new
chr5	179841907	179858809	chr5:179841907-179858809	0	-	179848014	179858796	789624	6	157,76,89,95,60,79,	0,2244,6070,9335,11470,16823,
#Partially deleted in new
chr5	179842007	179858808	chr5:179842007-179858808	0	-	179853221	179858796	789624	5	57,76,89,241,78,	0,2144,5970,11189,16723,
#Partially deleted in new
chr5	179842046	179858808	chr5:179842046-179858808	0	-	179851358	179858796	789624	6	18,76,89,182,60,78,	0,2105,5931,9196,11331,16684,
#Partially deleted in new
chr5	179844173	179858844	chr5:179844173-179858844	0	-	179851345	179858796	789624	6	54,89,182,80,60,114,	0,3804,7069,9023,9204,14557,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	179845831	179846152	chr5:179845831-179846152	3	+	179845831	179845831	8553170	1	321,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	179847034	179847130	chr5:179847034-179847130	3	-	179847034	179847034	8553170	1	96,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	179847356	179858808	chr5:179847356-179858808	0	-	179847356	179847356	8553170	3	710,60,78,	0,6021,11374,
#Partially deleted in new
chr5	179851092	179858806	chr5:179851092-179858806	0	-	179851092	179851092	8553170	4	332,80,60,76,	0,2104,2285,7638,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	179853282	179862173	chr5:179853282-179862173	0	-	179853282	179853282	8553170	3	155,194,213,	0,7231,8678,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	179859012	179861283	chr5:179859012-179861283	3	+	179859012	179859012	789624	2	200,1254,	0,1017,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr5	179862065	179907856	chr5:179862065-179907856	3	-	179863447	179907821	789624	21	2063,107,51,72,66,241,69,99,130,286,118,215,151,162,210,208,259,229,119,111,153,	0,3188,3772,5712,7703,8189,9396,10826,11053,12836,13854,16243,16981,17562,26037,29313,31143,32320,37123,42636,45638,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr5	179862065	179907859	chr5:179862065-179907859	1	-	179863447	179907821	789624	22	2063,107,51,51,72,66,241,69,99,130,286,118,215,151,162,210,208,259,229,119,111,156,	0,3188,3772,5379,5712,7703,8189,9396,10826,11053,12836,13854,16243,16981,17562,26037,29313,31143,32320,37123,42636,45638,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	179862065	179867028	chr5:179862065-179867028	0	-	179862065	179862065	8553170	2	2063,1775,	0,3188,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	179862065	179871805	chr5:179862065-179871805	1	-	179863447	179871473	789624	8	2063,107,51,72,66,241,69,86,	0,3188,3772,5712,7703,8189,9396,9654,
#Partially deleted in new
chr5	179862372	179879703	chr5:179862372-179879703	0	-	179862541	179879703	789624	4	226,215,151,76,	0,15936,16674,17255,
#Partially deleted in new
chr5	179862737	179872274	chr5:179862737-179872274	0	-	179862737	179862737	8553170	7	1391,107,51,72,66,241,813,	0,2516,3100,5040,7031,7517,8724,
#Deleted in new
chr5	179862742	179867302	chr5:179862742-179867302	0	-	179862742	179862742	8553170	3	1386,107,1465,	0,2511,3095,
#Partially deleted in new
chr5	179863403	179893233	chr5:179863403-179893233	0	-	179865258	179893233	789624	4	725,13,164,25,	0,1850,28019,29805,
#Partially deleted in new
chr5	179867240	179871501	chr5:179867240-179871501	0	-	179867240	179867240	8553170	5	143,72,66,241,40,	0,537,2528,3014,4221,
#Partially deleted in new
chr5	179867303	179871816	chr5:179867303-179871816	0	-	179867303	179867303	8553170	4	546,66,241,355,	0,2465,2951,4158,
#Partially deleted in new
chr5	179867804	179870700	chr5:179867804-179870700	0	-	179867804	179867804	8553170	3	45,66,446,	0,1964,2450,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	179868057	179870408	chr5:179868057-179870408	0	-	179868057	179868057	8553170	2	1777,154,	0,2197,
#Deleted in new
chr5	179872415	179873135	chr5:179872415-179873135	0	-	179872415	179872415	8553170	2	575,17,	0,703,
#Partially deleted in new
chr5	179874926	179879406	chr5:179874926-179879406	0	-	179874926	179874926	8553170	4	261,118,215,360,	0,993,3382,4120,
#Partially deleted in new
chr5	179879045	179880023	chr5:179879045-179880023	0	-	179879045	179879045	8553170	2	152,396,	0,582,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	179884368	179893237	chr5:179884368-179893237	0	-	179884368	179884368	8553170	4	169,210,208,29,	0,3734,7010,8840,
#Deleted in new
chr5	179887670	179888314	chr5:179887670-179888314	0	-	179887670	179887670	8553170	2	234,212,	0,432,
#Partially deleted in new
chr5	179888102	179894458	chr5:179888102-179894458	0	-	179888102	179888102	8553170	2	210,73,	0,6283,
#Partially deleted in new
chr5	179893424	179907852	chr5:179893424-179907852	0	-	179894540	179907821	789624	4	43,229,111,149,	0,961,11277,14279,
#Partially deleted in new
chr5	179894540	179907821	chr5:179894540-179907821	1	-	179894540	179907821	789624	3	74,111,118,	0,10161,13163,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	179911650	180071721	chr5:179911650-180071721	1	-	179920316	180071702	789624	8	8776,205,97,83,72,251,195,266,	0,55155,58759,66552,68478,101410,128802,159805,
#Partially deleted in new
chr5	179933804	179934196	chr5:179933804-179934196	7	-	179933804	179933804	16724991	1	392,	0,
#Deleted in new
chr5	179939456	179940132	chr5:179939456-179940132	7	-	179939456	179939456	16724991	1	676,	0,
#Partially deleted in new
chr5	179955066	180072118	chr5:179955066-180072118	3	-	179955653	180071702	789624	9	603,94,205,97,83,72,251,195,663,	0,8404,11739,15343,23136,25062,57994,85386,116389,
#Partially deleted in new
chr5	179955452	180072101	chr5:179955452-180072101	1	-	179955664	180071702	789624	8	217,205,97,83,72,251,195,646,	0,11353,14957,22750,24676,57608,85000,116003,
#Deleted in new
chr5	179955479	179956516	chr5:179955479-179956516	0	-	179955479	179955479	8553170	2	190,472,	0,565,
#Partially deleted in new
chr5	179955479	180072113	chr5:179955479-180072113	0	-	180013272	180071702	789624	9	190,94,205,97,83,72,218,173,658,	0,7991,11326,14930,22723,24649,57581,84995,115976,
#Partially deleted in new
chr5	179955479	179963943	chr5:179955479-179963943	0	-	179955479	179955479	8553170	2	190,473,	0,7991,
#Deleted in new
chr5	179963614	179964419	chr5:179963614-179964419	3	+	179963614	179963614	8553170	2	118,451,	0,354,
#Partially deleted in new
chr5	179966982	179980518	chr5:179966982-179980518	0	-	179966982	179966982	8553170	4	28,97,83,390,	0,3427,11220,13146,
#Partially deleted in new
chr5	179974583	179980186	chr5:179974583-179980186	3	+	179974583	179974583	8553170	3	570,155,1290,	0,3975,4313,
#Partially deleted in new
chr5	179976773	179978287	chr5:179976773-179978287	0	-	179976773	179976773	8553170	2	612,85,	0,1429,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	180015302	180015397	chr5:180015302-180015397	3	-	180015302	180015302	5263520	1	95,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	180078356	180081691	chr5:180078356-180081691	3	-	180078356	180078356	8553170	1	3335,	0,
#Partially deleted in new
chr5	180085716	180087038	chr5:180085716-180087038	7	-	180085716	180085716	16724991	2	484,531,	0,791,
#Partially deleted in new
chr5	180100790	180209153	chr5:180100790-180209153	3	-	180101500	180138052	789624	14	735,73,124,96,96,80,103,90,75,201,138,123,183,126,	0,1280,10666,13655,17818,17996,18555,20269,26818,27619,35587,36799,37085,108237,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr5	180100795	180209145	chr5:180100795-180209145	1	-	180114492	180128595	789624	15	730,73,124,96,38,96,80,103,90,75,201,138,123,183,118,	0,1275,10661,13650,14451,17813,17991,18550,20264,26813,27614,35582,36794,37080,108232,
#Partially deleted in new
chr5	180100803	180138349	chr5:180100803-180138349	1	-	180101500	180138052	789624	13	722,73,124,96,96,80,103,90,75,201,138,123,474,	0,1267,10653,13642,17805,17983,18542,20256,26805,27606,35574,36786,37072,
#Partially deleted in new
chr5	180100807	180136776	chr5:180100807-180136776	1	-	180101500	180128595	789624	11	718,73,124,96,96,80,103,90,75,201,399,	0,1263,10649,13638,17801,17979,18538,20252,26801,27602,35570,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr5	180100810	180136578	chr5:180100810-180136578	0	-	180114492	180128595	789624	12	715,73,124,96,38,96,80,103,90,75,201,201,	0,1260,10646,13635,14436,17798,17976,18535,20249,26798,27599,35567,
#Partially deleted in new
chr5	180101331	180115400	chr5:180101331-180115400	0	-	180101331	180101331	8553170	5	194,73,124,96,33,	0,739,10125,13114,14036,
#Partially deleted in new
chr5	180118831	180135312	chr5:180118831-180135312	0	-	180118831	180118831	8553170	6	35,99,90,75,201,95,	0,514,2228,8777,9578,16386,
#Deleted in new
chr5	180226377	180227000	chr5:180226377-180227000	7	-	180226377	180226377	16724991	1	623,	0,
#Partially deleted in new
chr5	180233142	180292099	chr5:180233142-180292099	3	-	180236383	180280561	0	12	3384,72,64,125,183,72,166,139,59,130,169,252,	0,5189,6781,7888,9430,14296,15830,28541,31638,36137,47297,58705,
#Partially deleted in new
chr5	180233593	180292099	chr5:180233593-180292099	1	-	180236514	180280561	0	12	2938,72,64,125,183,72,166,139,59,130,169,252,	0,4738,6330,7437,8979,14261,15379,28090,31187,35686,46846,58254,
#Partially deleted in new
chr5	180233593	180292056	chr5:180233593-180292056	1	-	180236514	180280561	0	12	2938,72,64,125,183,72,166,139,59,130,169,209,	0,4738,6330,7437,8979,13845,15379,28090,31187,35686,46846,58254,
#Partially deleted in new
chr5	180233593	180292071	chr5:180233593-180292071	1	-	180236383	180280561	0	12	2933,72,64,125,183,72,166,139,59,130,169,224,	0,4738,6330,7437,8979,14261,15379,28090,31187,35686,46846,58254,
#Partially deleted in new
chr5	180236186	180292092	chr5:180236186-180292092	1	-	180236383	180280561	789624	10	340,72,64,125,166,139,59,130,169,245,	0,2145,3737,4844,12786,25497,28594,33093,44253,55661,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	180236525	180242900	chr5:180236525-180242900	0	-	180236525	180236525	8553170	4	1878,64,125,328,	0,3398,4505,6047,
#Partially deleted in new
chr5	180238308	180280581	chr5:180238308-180280581	1	-	180269397	180280561	789624	11	95,64,125,183,72,166,139,59,130,241,142,	0,1615,2722,4264,9130,10664,23375,26472,30971,41487,42131,
#Partially deleted in new
chr5	180242577	180292037	chr5:180242577-180292037	0	-	180269397	180280561	789624	9	178,72,166,139,59,130,241,169,190,	0,4861,6395,19106,22203,26702,37218,37862,49270,
#Partially deleted in new
chr5	180242727	180263089	chr5:180242727-180263089	0	-	180242727	180242727	8553170	5	28,72,166,139,133,	0,4711,6245,18956,20229,
#Partially deleted in new
chr5	180246027	180291967	chr5:180246027-180291967	1	-	180247397	180280561	0	7	1483,166,139,59,130,169,120,	0,2945,15656,18753,23252,34412,45820,
#Partially deleted in new
chr5	180246544	180280581	chr5:180246544-180280581	1	-	180247699	180280561	789624	7	966,66,166,139,59,130,142,	0,1118,2428,15139,18236,22735,33895,
#Partially deleted in new
chr5	180253506	180264842	chr5:180253506-180264842	0	-	180253506	180253506	8553170	3	171,139,62,	0,8177,11274,
#Deleted in new
chr5	180257679	180258366	chr5:180257679-180258366	7	+	180257679	180257679	16724991	1	687,	0,
#Partially deleted in new
chr5	180264780	180292053	chr5:180264780-180292053	0	-	180264780	180280561	789624	5	59,130,169,93,206,	0,4499,15659,22194,27067,
#Partially deleted in new
chr5	180300689	180353387	chr5:180300689-180353387	3	-	180301563	180353217	789624	19	919,162,168,128,115,158,121,98,96,164,118,80,62,135,59,126,99,108,177,	0,1733,4082,6486,11740,13117,15651,16074,16273,18103,23498,24126,27587,30010,30805,35138,35789,37803,52521,
#Partially deleted in new
chr5	180316763	180324486	chr5:180316763-180324486	0	-	180316763	180316763	8553170	4	98,96,164,299,	0,199,2029,7424,
#Partially deleted in new
chr5	180318618	180324364	chr5:180318618-180324364	0	-	180318618	180318618	8553170	2	338,177,	0,5569,
#Partially deleted in new
chr5	180318808	180331648	chr5:180318808-180331648	0	-	180318808	180331599	789624	6	148,118,80,62,135,154,	0,5379,6007,9468,11891,12686,
#Partially deleted in new
chr5	180318843	180330934	chr5:180318843-180330934	0	-	180318843	180318843	8553170	5	113,118,80,62,235,	0,5344,5972,9433,11856,
#Partially deleted in new
chr5	180331411	180353336	chr5:180331411-180353336	0	-	180331411	180331411	8553170	5	142,126,99,108,126,	0,4416,5067,7081,21799,
#Partially deleted in new
chr5	180335868	180353336	chr5:180335868-180353336	0	-	180335868	180335868	8553170	3	709,108,126,	0,2624,17342,
#Partially deleted in new
chr5	180338572	180352900	chr5:180338572-180352900	0	-	180338572	180352879	789624	2	28,529,	0,13799,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	180441558	180443238	chr5:180441558-180443238	3	+	180441558	180441558	8553170	2	297,509,	0,1171,
#Deleted in new
chr5	180444508	180444612	chr5:180444508-180444612	3	+	180444508	180444508	8553170	1	104,	0,
#Deleted in new
chr5	180494411	180495755	chr5:180494411-180495755	0	+	180494411	180494411	8553170	2	352,104,	0,1240,
#Partially deleted in new
chr5	180494416	180578353	chr5:180494416-180578353	1	+	180529276	180574200	789624	12	347,114,187,86,105,69,158,155,155,231,203,4366,	0,34858,55514,58969,70072,70258,71403,72671,73432,74693,76813,79571,
#Partially deleted in new
chr5	180494432	180578405	chr5:180494432-180578405	3	+	180529276	180574200	789624	14	65,189,168,114,187,86,105,69,158,155,155,231,203,4418,	0,142,988,34842,55498,58953,70056,70242,71387,72655,73416,74677,76797,79555,
#Partially deleted in new
chr5	180494446	180549995	chr5:180494446-180549995	0	+	180494446	180494446	8553170	2	317,65,	0,55484,
#Partially deleted in new
chr5	180494506	180578349	chr5:180494506-180578349	1	+	180529276	180574200	789624	13	257,168,114,187,86,105,69,158,155,155,231,203,4362,	0,914,34768,55424,58879,69982,70168,71313,72581,73342,74603,76723,79481,
#Partially deleted in new
chr5	180494706	180564682	chr5:180494706-180564682	0	+	180494706	180494706	8553170	4	57,114,187,194,	0,34568,55224,69782,
#Partially deleted in new
chr5	180529274	180567968	chr5:180529274-180567968	0	+	180529276	180567968	789624	6	114,90,69,158,155,120,	0,35214,35400,36545,37813,38574,
#Deleted in new
chr5	180534183	180534642	chr5:180534183-180534642	7	-	180534183	180534183	16724991	1	459,	0,
#Deleted in new
chr5	180590102	180591540	chr5:180590102-180591540	3	-	180590230	180591462	789624	3	152,239,130,	0,497,1308,
#Deleted in new
chr5	180590104	180591163	chr5:180590104-180591163	0	-	180590104	180590104	8553170	2	150,564,	0,495,
#Partially deleted in new
chr5	180601505	180649624	chr5:180601505-180649624	3	-	180603191	180649545	0	30	1885,86,121,149,106,100,112,123,95,151,89,114,105,136,107,132,147,363,109,127,163,155,118,169,140,163,113,245,97,137,	0,7462,8399,9825,11000,11505,12562,14861,15394,17264,17515,17747,18159,18667,19103,19370,19600,20036,21225,22429,24363,24605,27376,27753,28190,28437,28719,29049,30176,47982,
#Partially deleted in new
chr5	180603088	180611716	chr5:180603088-180611716	0	-	180603088	180603088	8553170	4	302,86,121,386,	0,5879,6816,8242,
#Partially deleted in new
chr5	180608964	180649624	chr5:180608964-180649624	1	-	180628927	180649545	789624	28	89,121,149,106,100,112,123,95,151,89,114,105,136,107,132,147,363,109,127,163,155,118,140,163,113,245,97,137,	0,940,2366,3541,4046,5103,7402,7935,9805,10056,10288,10700,11208,11644,11911,12141,12577,13766,14970,16904,17146,19917,20731,20978,21260,21590,22717,40523,
#Deleted in new
chr5	180612402	180613393	chr5:180612402-180613393	0	-	180612402	180612402	8553170	2	209,383,	0,608,
#Deleted in new
chr5	180614075	180619137	chr5:180614075-180619137	0	-	180614075	180614075	8553170	4	104,123,95,368,	0,2291,2824,4694,
#Deleted in new
chr5	180614085	180619369	chr5:180614085-180619369	0	-	180614085	180618884	789624	5	94,123,95,151,117,	0,2281,2814,4684,5167,
#Partially deleted in new
chr5	180620974	180649545	chr5:180620974-180649545	0	-	180620974	180620974	8553170	14	278,363,109,127,163,155,118,169,140,163,113,245,97,58,	0,567,1756,2960,4894,5136,7907,8284,8721,8968,9250,9580,10707,28513,
#Partially deleted in new
chr5	180628927	180649545	chr5:180628927-180649545	0	-	180628927	180628927	8553170	7	72,140,163,113,245,97,58,	0,768,1015,1297,1627,2754,20560,
#Partially deleted in new
chr5	180629778	180649545	chr5:180629778-180649545	0	-	180629778	180629778	8553170	6	57,163,64,245,97,58,	0,164,446,776,1903,19709,
#Deleted in new
chr5	180671891	180672598	chr5:180671891-180672598	7	-	180671891	180671891	16724991	1	707,	0,
#Partially deleted in new
chr5	180684765	180686546	chr5:180684765-180686546	3	+	180684765	180684765	8553170	2	141,898,	0,883,
#Deleted in new
chr5	180692831	180693763	chr5:180692831-180693763	7	-	180692831	180692831	16724991	1	932,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	180729585	180729737	chr5:180729585-180729737	3	+	180729585	180729585	8553170	1	152,	0,
#Deleted in new
chr5	180739041	180740099	chr5:180739041-180740099	3	-	180739122	180740058	789624	1	1058,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	180784781	180815541	chr5:180784781-180815541	3	-	180791633	180792971	789624	3	8316,419,128,	0,23866,30632,
#Partially deleted in new
chr5	180790542	180802885	chr5:180790542-180802885	1	-	180791633	180792971	789624	2	2555,206,	0,12137,
#Partially deleted in new
chr5	180790547	180810137	chr5:180790547-180810137	1	-	180791633	180792971	789624	3	2550,429,98,	0,18100,19492,
#Partially deleted in new
chr5	180790547	180809829	chr5:180790547-180809829	1	-	180791633	180792971	789624	3	2550,429,196,	0,18100,19086,
#Partially deleted in new
chr5	180791481	180803904	chr5:180791481-180803904	1	-	180791633	180792971	789624	2	1616,303,	0,12120,
#Partially deleted in new
chr5	180792372	180802794	chr5:180792372-180802794	0	-	180792372	180792971	789624	3	725,38,115,	0,3465,10307,
#Partially deleted in new
chr5	180792510	180810127	chr5:180792510-180810127	0	-	180792510	180792971	789624	3	587,429,88,	0,16137,17529,
#Partially deleted in new
chr5	180792589	180803923	chr5:180792589-180803923	0	-	180792589	180792971	789624	2	508,111,	0,11223,
#Partially deleted in new
chr5	180792624	180803481	chr5:180792624-180803481	0	-	180792624	180792971	789624	2	473,76,	0,10781,
#Partially deleted in new
chr5	180792637	180803399	chr5:180792637-180803399	0	-	180792637	180792971	789624	2	460,104,	0,10658,
#Partially deleted in new
chr5	180792657	180815580	chr5:180792657-180815580	0	-	180792657	180792971	789624	2	440,167,	0,22756,
#Partially deleted in new
chr5	180792661	180808758	chr5:180792661-180808758	0	-	180792661	180792971	789624	2	436,257,	0,15840,
#Partially deleted in new
chr5	180792685	180815567	chr5:180792685-180815567	0	-	180792685	180792971	789624	2	412,143,	0,22739,
#Partially deleted in new
chr5	180792869	180802803	chr5:180792869-180802803	0	-	180792869	180792971	789624	3	228,220,124,	0,2786,9810,
#Partially deleted in new
chr5	180793061	180809850	chr5:180793061-180809850	0	-	180793061	180793061	8553170	4	36,96,191,217,	0,15440,15824,16572,
#Partially deleted in new
chr5	180795405	180815567	chr5:180795405-180815567	0	-	180795405	180795405	8553170	2	470,143,	0,20019,
#Partially deleted in new
chr5	180795429	180802767	chr5:180795429-180802767	0	-	180795429	180795429	8553170	2	446,88,	0,7250,
#Deleted in new
chr5	180808525	180810920	chr5:180808525-180810920	0	-	180808525	180808525	8553170	3	69,191,272,	0,360,2123,
#Deleted in new
chr5	180808835	180810503	chr5:180808835-180810503	0	-	180808835	180808835	8553170	2	241,312,	0,1356,
#Deleted in new
chr5	180808837	180810505	chr5:180808837-180810505	0	-	180808837	180808837	8553170	2	239,74,	0,1594,
#Partially deleted in new
chr5	180808838	180815541	chr5:180808838-180815541	0	-	180808838	180808838	8553170	2	228,128,	0,6575,
#Partially deleted in new
chr5	180808840	180815652	chr5:180808840-180815652	0	-	180808840	180808840	8553170	2	236,239,	0,6573,
#Deleted in new
chr5	180808840	180810938	chr5:180808840-180810938	0	-	180808840	180808840	8553170	2	235,210,	0,1888,
#Deleted in new
chr5	180808843	180809875	chr5:180808843-180809875	0	-	180808843	180808843	8553170	2	233,512,	0,520,
#Deleted in new
chr5	180809013	180810440	chr5:180809013-180810440	0	-	180809013	180809013	8553170	2	63,401,	0,1026,
#Deleted in new
chr5	180810400	180811384	chr5:180810400-180811384	3	+	180810400	180810400	8553170	1	984,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	180829953	180831605	chr5:180829953-180831605	3	-	180829953	180829953	789624	1	1652,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	180830956	180835726	chr5:180830956-180835726	1	+	180830956	180830956	789624	3	273,183,1415,	0,802,3355,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	180831023	180835726	chr5:180831023-180835726	0	+	180831023	180831023	789624	3	206,188,1415,	0,1649,3288,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	180831026	180834779	chr5:180831026-180834779	0	+	180831026	180831026	8553170	2	203,468,	0,3285,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	180831038	180834871	chr5:180831038-180834871	2	+	180831038	180831038	8553170	3	191,71,560,	0,697,3273,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	180831364	180835678	chr5:180831364-180835678	0	+	180831364	180831364	8553170	2	442,1367,	0,2947,
#Partially deleted in new
chr5	180847610	180861285	chr5:180847610-180861285	0	-	180847610	180847610	8553170	4	472,113,73,67,	0,3770,4377,13608,
#Partially deleted in new
chr5	180847614	180861276	chr5:180847614-180861276	3	-	180848791	180851395	789624	3	3879,73,58,	0,4373,13604,
#Deleted in new
chr5	180847927	180849516	chr5:180847927-180849516	0	-	180847927	180847927	8553170	2	155,363,	0,1226,
#Partially deleted in new
chr5	180848137	180861277	chr5:180848137-180861277	1	-	180848791	180861219	789624	2	3356,59,	0,13081,
#Partially deleted in new
chr5	180850914	180860697	chr5:180850914-180860697	0	-	180850914	180851395	789624	2	579,170,	0,9613,
#Partially deleted in new
chr5	180851084	180861276	chr5:180851084-180861276	0	-	180851084	180851395	789624	3	409,73,62,	0,903,10130,
#Partially deleted in new
chr5	180851160	180860663	chr5:180851160-180860663	0	-	180851160	180851395	789624	3	333,73,136,	0,827,9367,
#Partially deleted in new
chr5	180899076	180950906	chr5:180899076-180950906	3	+	180899310	180949955	789624	8	283,348,276,244,21,27,27,1003,	0,9509,12262,48435,49278,49843,50162,50827,
#Partially deleted in new
chr5	180899104	180950906	chr5:180899104-180950906	1	+	180899310	180950544	789624	8	255,348,276,114,21,27,27,1003,	0,9481,12234,48407,49250,49815,50134,50799,
#Partially deleted in new
chr5	180899121	180950661	chr5:180899121-180950661	1	+	180902374	180950544	789624	8	238,51,276,114,21,27,27,758,	0,3224,12217,48390,49233,49798,50117,50782,
#Partially deleted in new
chr5	180899273	180950612	chr5:180899273-180950612	1	+	180899310	180949955	789624	7	86,348,276,244,27,27,709,	0,9312,12065,48238,49646,49965,50630,
#Partially deleted in new
chr5	180899273	180950612	chr5:180899273-180950612	1	+	180899310	180950544	789624	7	86,276,114,21,27,27,709,	0,12065,48238,49081,49646,49965,50630,
#Partially deleted in new
chr5	180902374	180950904	chr5:180902374-180950904	1	+	180902374	180950544	789624	7	22,276,114,21,27,27,1001,	0,8964,45137,45980,46545,46864,47529,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	180909563	180950598	chr5:180909563-180950598	1	+	180911562	180950544	789624	7	134,276,114,21,27,27,695,	0,1775,37948,38791,39356,39675,40340,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	180909563	180950904	chr5:180909563-180950904	1	+	180911493	180950544	789624	7	134,276,114,21,27,27,1001,	0,1775,37948,38791,39356,39675,40340,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	180909572	180948353	chr5:180909572-180948353	0	+	180909572	180909572	8553170	3	125,276,842,	0,1766,37939,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	180909578	180948921	chr5:180909578-180948921	0	+	180909578	180909578	8553170	4	119,276,114,567,	0,1760,37933,38776,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	180909837	180909927	chr5:180909837-180909927	3	+	180909837	180909837	8553170	1	90,	0,
#Partially deleted in new
chr5	180911488	180949633	chr5:180911488-180949633	0	+	180911493	180947629	789624	5	126,131,21,27,395,	0,36136,36866,37431,37750,
#Partially deleted in new
chr5	180945755	180945907	chr5:180945755-180945907	7	+	180945755	180945755	16724991	1	152,	0,
#Partially deleted in new
chr5	180967188	180970762	chr5:180967188-180970762	7	-	180967188	180967188	16724991	2	484,711,	0,2863,
#Partially deleted in new
chr5	180967847	180968567	chr5:180967847-180968567	7	+	180967847	180967847	16724991	1	720,	0,
#Partially deleted in new
chr5	180982272	180982611	chr5:180982272-180982611	7	+	180982272	180982272	16724991	1	339,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	180988844	181006727	chr5:180988844-181006727	3	+	180989028	181005872	789624	8	233,348,276,114,21,27,27,1394,	0,3968,8368,13827,15011,15572,15891,16489,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	181007280	181007384	chr5:181007280-181007384	3	+	181007280	181007280	8553170	1	104,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	181040224	181061523	chr5:181040224-181061523	3	+	181045489	181059862	789624	11	208,132,345,282,117,33,21,21,27,27,2287,	0,5242,7702,9863,12975,13244,14014,15208,15764,18127,19012,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr5	181040224	181057169	chr5:181040224-181057169	1	+	181045489	181056617	789624	11	208,132,345,282,117,33,21,21,27,125,315,	0,5242,7702,9863,12975,13244,14014,15208,15764,16313,16630,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	181040236	181055768	chr5:181040236-181055768	0	+	181045489	181053563	789624	7	196,132,345,282,117,791,336,	0,5230,7690,9851,12963,13232,15196,
#Partially deleted in new
chr5	181040265	181054001	chr5:181040265-181054001	1	+	181048024	181053563	789624	5	167,345,282,117,533,	0,7661,9822,12934,13203,
#Partially deleted in new
chr5	181040271	181048104	chr5:181040271-181048104	0	+	181040271	181040271	8553170	4	161,132,37,178,	0,5195,7207,7655,
#Deleted in new
chr5	181043402	181043484	chr5:181043402-181043484	3	-	181043402	181043402	5263520	1	82,	0,
#Deleted in new
chr5	181052784	181053873	chr5:181052784-181053873	0	+	181052784	181052784	8553170	3	49,117,405,	0,415,684,
#Deleted in new
chr5	181053048	181053811	chr5:181053048-181053811	0	+	181053048	181053048	8553170	2	268,343,	0,420,
#Deleted in new
chr5	181053119	181055302	chr5:181053119-181055302	0	+	181053119	181053119	8553170	3	197,33,102,	0,349,2081,
#Deleted in new
chr5	181053601	181055316	chr5:181053601-181055316	0	+	181053601	181053601	8553170	3	539,21,116,	0,637,1599,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	181054060	181059312	chr5:181054060-181059312	0	+	181054060	181054060	8553170	4	199,583,27,76,	0,1372,4291,5176,
#Deleted in new
chr5	181065085	181065677	chr5:181065085-181065677	7	+	181065085	181065085	16724991	1	592,	0,
#Deleted in new
chr5	181099139	181100666	chr5:181099139-181100666	7	-	181099139	181099139	16724991	1	1527,	0,
#Partially deleted in new
chr5	181114105	181115674	chr5:181114105-181115674	7	+	181114105	181114105	16724991	1	1569,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	181123121	181130577	chr5:181123121-181130577	1	-	181124356	181125304	789624	3	2204,56,405,	0,6398,7051,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	181123121	181130577	chr5:181123121-181130577	1	-	181124356	181130245	789624	2	2089,405,	0,7051,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	181123121	181131169	chr5:181123121-181131169	3	-	181124356	181125304	789624	4	2204,56,43,120,	0,6398,7051,7928,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	181123121	181130577	chr5:181123121-181130577	1	-	181124356	181125304	789624	2	2204,405,	0,7051,
#Deleted in new
chr5	181124356	181125304	chr5:181124356-181125304	1	-	181124356	181125304	789624	1	948,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	181147585	181159285	chr5:181147585-181159285	3	+	181154942	181155890	789624	2	410,4367,	0,7333,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	181147637	181159285	chr5:181147637-181159285	1	+	181154942	181155890	789624	3	18,43,4367,	0,315,7281,
#Deleted in new
chr5	181154942	181155890	chr5:181154942-181155890	1	+	181154942	181155890	789624	1	948,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	181191045	181191852	chr5:181191045-181191852	3	-	181191045	181191045	789624	2	300,111,	0,696,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	181191923	181194429	chr5:181191923-181194429	0	+	181191923	181191923	8553170	2	93,196,	0,2310,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	181192069	181194428	chr5:181192069-181194428	3	+	181192069	181192069	8553170	3	71,126,195,	0,1272,2164,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	181193923	181205172	chr5:181193923-181205172	3	-	181195165	181205110	789624	7	1754,36,116,23,231,96,584,	0,4259,4766,5171,5927,9621,10665,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr5	181193924	181204340	chr5:181193924-181204340	1	-	181195165	181200075	789624	7	1753,36,116,23,231,96,596,	0,4258,4765,5170,5926,9620,9820,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	181193929	181198757	chr5:181193929-181198757	0	-	181193929	181193929	8553170	2	4289,68,	0,4760,
#Partially deleted in new
chr5	181194612	181200930	chr5:181194612-181200930	1	-	181195165	181200153	789624	5	1065,36,116,23,1080,	0,3570,4077,4482,5238,
#Partially deleted in new
chr5	181194612	181204340	chr5:181194612-181204340	1	-	181195165	181200075	789624	7	1065,36,116,23,231,164,319,	0,3570,4077,4482,5238,8864,9409,
#Partially deleted in new
chr5	181195495	181199977	chr5:181195495-181199977	1	+	181195495	181195495	8553170	3	172,43,285,	0,4053,4197,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	181198199	181203103	chr5:181198199-181203103	0	+	181198199	181198199	8553170	2	77,516,	0,4388,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	181198201	181203100	chr5:181198201-181203100	0	+	181198201	181198201	8553170	2	70,513,	0,4386,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	181199367	181203101	chr5:181199367-181203101	3	+	181199367	181199367	8553170	2	224,514,	0,3220,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	181200912	181203103	chr5:181200912-181203103	0	+	181200912	181200912	8553170	2	104,516,	0,1675,
#Deleted in new
chr5	181203117	181205293	chr5:181203117-181205293	1	-	181203496	181205110	789624	2	523,705,	0,1471,
#Deleted in new
chr5	181203117	181203820	chr5:181203117-181203820	0	-	181203117	181203117	8553170	2	523,76,	0,627,
#Deleted in new
chr5	181205360	181206120	chr5:181205360-181206120	3	-	181205360	181205360	8553170	2	329,127,	0,633,
#Partially deleted in new
chr5	181222498	181234326	chr5:181222498-181234326	0	+	181230800	181234326	789624	6	283,96,231,23,128,153,	0,8245,10160,10914,11137,11675,
#Deleted in new
chr5	181222565	181222633	chr5:181222565-181222633	3	-	181222565	181222565	5263520	1	68,	0,
#Partially deleted in new
chr5	181223289	181235809	chr5:181223289-181235809	3	+	181223999	181234775	0	6	1523,96,231,23,128,1636,	0,7454,9369,10123,10346,10884,
#Partially deleted in new
chr5	181223289	181235808	chr5:181223289-181235808	1	+	181223999	181235379	0	8	1523,96,231,23,128,176,64,455,	0,7454,9369,10123,10346,10884,11642,12064,
#Partially deleted in new
chr5	181223289	181235806	chr5:181223289-181235806	0	+	181223289	181223289	8553170	5	1523,96,231,351,1633,	0,7454,9369,10123,10884,
#Partially deleted in new
chr5	181224057	181235807	chr5:181224057-181235807	0	+	181224057	181233641	789624	7	755,96,231,128,176,64,454,	0,6686,8601,9578,10116,10874,11296,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	181224165	181235803	chr5:181224165-181235803	0	+	181224165	181224165	8553170	2	647,5060,	0,6578,
#Partially deleted in new
chr5	181224645	181230685	chr5:181224645-181230685	3	-	181224645	181224645	8553170	2	498,68,	0,5972,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	181224690	181233524	chr5:181224690-181233524	0	+	181224690	181224690	8553170	2	6149,866,	0,7968,
#Deleted in new
chr5	181233408	181235397	chr5:181233408-181235397	0	+	181233408	181235013	789624	5	27,128,176,84,44,	0,227,765,1587,1945,
#Deleted in new
chr5	181233705	181234818	chr5:181233705-181234818	0	+	181233705	181233705	8553170	2	58,694,	0,419,
#Partially deleted in new
chr5	181236908	181243916	chr5:181236908-181243916	0	-	181243680	181243800	789624	8	134,111,141,111,96,148,172,237,	0,700,1190,2158,2578,4583,5265,6771,
#Partially deleted in new
chr5	181236925	181243889	chr5:181236925-181243889	0	-	181241573	181243800	789624	8	117,111,141,111,96,148,176,198,	0,683,1173,2141,2561,4566,5244,6766,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	181236927	181238663	chr5:181236927-181238663	1	-	181236976	181238227	789624	3	115,111,565,	0,681,1171,
#Partially deleted in new
chr5	181236928	181242206	chr5:181236928-181242206	0	-	181236976	181242206	789624	6	114,111,141,96,148,33,	0,680,1170,2558,4563,5245,
#Partially deleted in new
chr5	181236928	181242246	chr5:181236928-181242246	0	-	181236993	181242246	789624	8	114,95,111,141,111,96,148,73,	0,296,680,1170,2138,2558,4563,5245,
#Partially deleted in new
chr5	181236928	181238195	chr5:181236928-181238195	0	-	181237566	181238195	789624	2	791,97,	0,1170,
#Partially deleted in new
chr5	181236933	181243880	chr5:181236933-181243880	1	-	181236976	181243800	789624	6	109,111,96,148,172,189,	0,2133,2553,4558,5240,6758,
#Partially deleted in new
chr5	181236936	181243903	chr5:181236936-181243903	1	-	181236976	181243800	789624	8	106,111,141,111,96,148,40,212,	0,672,1162,2130,2550,4555,5237,6755,
#Partially deleted in new
chr5	181236936	181241639	chr5:181236936-181241639	0	-	181237184	181241639	789624	6	383,111,141,111,96,148,	0,672,1162,2130,2550,4555,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	181236936	181237860	chr5:181236936-181237860	0	-	181236936	181236936	8553170	2	106,252,	0,672,
#Partially deleted in new
chr5	181236936	181239584	chr5:181236936-181239584	0	-	181236976	181239584	789624	4	106,141,111,98,	0,1162,2130,2550,
#Partially deleted in new
chr5	181236936	181244209	chr5:181236936-181244209	3	-	181236976	181243800	0	8	106,111,141,111,96,148,172,518,	0,672,1162,2130,2550,4555,5237,6755,
#Partially deleted in new
chr5	181236940	181243891	chr5:181236940-181243891	1	-	181236976	181243800	789624	3	102,86,200,	0,668,6751,
#Partially deleted in new
chr5	181236944	181243880	chr5:181236944-181243880	1	-	181236976	181243800	789624	7	98,111,141,111,96,176,189,	0,664,1154,2122,2542,5225,6747,
#Partially deleted in new
chr5	181236960	181243947	chr5:181236960-181243947	0	-	181236960	181236960	8553170	7	82,111,141,111,96,854,256,	0,648,1138,2106,2526,4531,6731,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	181238119	181247576	chr5:181238119-181247576	0	-	181238119	181247376	789624	6	120,111,96,148,172,453,	0,947,1367,3372,4054,9004,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr5	181238123	181243370	chr5:181238123-181243370	0	-	181238123	181242620	789624	6	116,111,96,148,172,817,	0,943,1363,3368,4050,4430,
#Partially deleted in new
chr5	181238169	181248096	chr5:181238169-181248096	0	-	181238169	181242331	789624	6	70,111,96,148,172,88,	0,897,1317,3322,4004,9839,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	181238205	181243742	chr5:181238205-181243742	0	-	181238205	181238205	8553170	5	972,96,148,172,51,	0,1281,3286,3968,5486,
#Partially deleted in new
chr5	181239037	181243904	chr5:181239037-181243904	0	-	181239037	181239037	8553170	4	545,148,172,225,	0,2454,3136,4642,
#Partially deleted in new
chr5	181239133	181243902	chr5:181239133-181243902	0	-	181241592	181243800	789624	5	44,96,148,60,211,	0,353,2358,3152,4558,
#Partially deleted in new
chr5	181239149	181243906	chr5:181239149-181243906	0	-	181239149	181243800	789624	5	28,96,72,176,215,	0,337,2342,3020,4542,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	181239286	181240473	chr5:181239286-181240473	0	-	181239286	181239286	8553170	2	296,258,	0,929,
#Partially deleted in new
chr5	181239538	181243904	chr5:181239538-181243904	0	-	181239538	181243800	789624	5	44,148,172,120,213,	0,1953,2635,3747,4153,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr5	181240956	181243914	chr5:181240956-181243914	0	-	181240956	181240956	8553170	4	462,148,172,223,	0,535,1217,2735,
#Partially deleted in new
chr5	181241436	181243902	chr5:181241436-181243902	0	-	181241436	181241436	8553170	3	203,176,211,	0,733,2255,
#Partially deleted in new
chr5	181241442	181243903	chr5:181241442-181243903	0	-	181241442	181241442	8553170	3	197,172,212,	0,731,2249,
#Deleted in new
chr5	181241813	181241892	chr5:181241813-181241892	3	-	181241813	181241813	789624	1	79,	0,
#Partially deleted in new
chr5	181242249	181243904	chr5:181242249-181243904	0	-	181242249	181242249	8553170	3	96,152,213,	0,1004,1442,
#Deleted in new
chr5	181243041	181243908	chr5:181243041-181243908	0	-	181243041	181243041	8553170	2	364,217,	0,650,
#Deleted in new
chr5	181243311	181243379	chr5:181243311-181243379	3	-	181243311	181243311	789624	1	68,	0,
#Partially deleted in new
chr5	181246524	181257244	chr5:181246524-181257244	1	+	181246524	181246524	789624	3	358,271,58,	0,591,10662,
#Partially deleted in new
chr5	181246900	181257586	chr5:181246900-181257586	1	+	181246900	181246900	8553170	2	486,400,	0,10286,
#Partially deleted in new
chr5	181247700	181257586	chr5:181247700-181257586	1	+	181247700	181247700	8553170	2	229,400,	0,9486,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	181254416	181260194	chr5:181254416-181260194	0	-	181254416	181254416	8553170	2	569,194,	0,5584,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	181255146	181261118	chr5:181255146-181261118	3	-	181257413	181260813	789624	2	2348,1118,	0,4854,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	181255718	181257586	chr5:181255718-181257586	0	+	181255718	181255718	8553170	1	1868,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr5	181256386	181261139	chr5:181256386-181261139	0	-	181256386	181256386	8553170	1	4753,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	181256483	181260257	chr5:181256483-181260257	0	-	181256483	181256483	8553170	2	376,257,	0,3517,
#Partially deleted in new
chr5	181257008	181260324	chr5:181257008-181260324	0	-	181257008	181257008	8553170	2	46,324,	0,2992,
#Deleted in new
chr5	181259260	181261081	chr5:181259260-181261081	0	-	181259260	181259260	8553170	2	646,1081,	0,740,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	181261211	181264261	chr5:181261211-181264261	0	+	181261211	181261211	789624	2	173,634,	0,2416,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	181261223	181264257	chr5:181261223-181264257	1	+	181261223	181261223	789624	3	161,162,206,	0,2404,2828,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr5	181263633	181264229	chr5:181263633-181264229	0	+	181263633	181263633	8553170	2	133,178,	0,418,
#Deleted in new
chr5	181281374	181283652	chr5:181281374-181283652	3	+	181281374	181281374	8553170	2	238,311,	0,1967,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr5	181291672	181295572	chr5:181291672-181295572	7	+	181291672	181291672	16724991	3	66,103,77,	0,3374,3823,
#Deleted in new
chr5	181301966	181302070	chr5:181301966-181302070	3	+	181301966	181301966	8553170	1	104,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr5	181306501	181324130	chr5:181306501-181324130	3	+	181306501	181306501	8553170	8	151,124,117,208,65,191,58,78,	0,7327,9335,9788,10829,15150,17400,17551,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	181316324	181321816	chr5:181316324-181321816	1	+	181316324	181316324	8553170	5	162,65,58,233,165,	0,1006,4170,4321,5327,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr5	181316367	181324685	chr5:181316367-181324685	1	+	181316367	181316367	8553170	5	119,65,191,58,633,	0,963,5284,7534,7685,
#Deleted in new
chr5	181329048	181331839	chr5:181329048-181331839	7	-	181329048	181329048	16724991	1	2791,	0,
#Partially deleted in new
chr5	181329240	181342213	chr5:181329240-181342213	3	+	181329240	181329240	8553170	3	350,169,208,	0,4502,12765,
#Deleted in new
chr5	181367267	181368262	chr5:181367267-181368262	3	+	181367286	181368225	789624	1	995,	0,
#Partially deleted in new
chr5	181378694	181379038	chr5:181378694-181379038	7	-	181378694	181378694	16724991	1	344,	0,
#Deleted in new
chr5	181471962	181472430	chr5:181471962-181472430	7	+	181471962	181471962	16724991	1	468,	0,
#Deleted in new
chr5_GL339449v2_alt	941	13309	chr5_GL339449v2_alt:941-13309	3	+	1011	12405	789624	4	112,64,188,922,	0,8578,10440,11446,
#Deleted in new
chr5_GL339449v2_alt	967	12411	chr5_GL339449v2_alt:967-12411	0	+	967	967	8553170	3	86,188,24,	0,10414,11420,
#Deleted in new
chr5_GL339449v2_alt	1013	13055	chr5_GL339449v2_alt:1013-13055	1	+	11470	12405	789624	4	284,60,188,668,	0,8510,10368,11374,
#Deleted in new
chr5_GL339449v2_alt	1068	11384	chr5_GL339449v2_alt:1068-11384	0	+	1068	1068	8553170	3	225,60,3,	0,8455,10313,
#Deleted in new
chr5_GL339449v2_alt	17974	33975	chr5_GL339449v2_alt:17974-33975	1	+	18155	33975	789624	3	247,60,51,	0,599,15950,
#Deleted in new
chr5_GL339449v2_alt	17974	60595	chr5_GL339449v2_alt:17974-60595	1	+	18155	45434	789624	8	247,60,34,100,87,150,148,323,	0,599,17623,27410,34406,38083,41734,42298,
#Deleted in new
chr5_GL339449v2_alt	18020	56070	chr5_GL339449v2_alt:18020-56070	0	+	38692	56070	789624	10	67,60,34,68,69,111,119,100,87,13,	0,553,17577,19763,20621,23204,24979,27364,34360,38037,
#Deleted in new
chr5_GL339449v2_alt	18040	39203	chr5_GL339449v2_alt:18040-39203	0	+	18040	18040	8553170	5	181,60,34,68,562,	0,533,17557,19743,20601,
#Deleted in new
chr5_GL339449v2_alt	18052	60589	chr5_GL339449v2_alt:18052-60589	1	+	18155	60301	0	12	169,60,34,68,69,111,119,100,87,150,148,317,	0,521,17545,19731,20589,23172,24947,27332,34328,38005,41656,42220,
#Deleted in new
chr5_GL339449v2_alt	18058	52467	chr5_GL339449v2_alt:18058-52467	0	+	18155	38649	789624	9	163,60,34,66,69,111,119,100,87,	0,515,17539,19725,20583,23166,24941,27326,34322,
#Deleted in new
chr5_GL339449v2_alt	18062	18675	chr5_GL339449v2_alt:18062-18675	0	+	18062	18062	8553170	2	159,102,	0,511,
#Deleted in new
chr5_GL339449v2_alt	18066	43056	chr5_GL339449v2_alt:18066-43056	0	+	18155	38649	789624	6	155,60,34,69,111,57,	0,507,17531,20575,23158,24933,
#Deleted in new
chr5_GL339449v2_alt	18071	45387	chr5_GL339449v2_alt:18071-45387	0	+	18155	41241	789624	6	150,60,34,111,119,3,	0,502,17526,23153,24928,27313,
#Deleted in new
chr5_GL339449v2_alt	18077	56117	chr5_GL339449v2_alt:18077-56117	0	+	18155	37789	789624	9	144,60,68,69,111,119,100,87,60,	0,496,19706,20564,23147,24922,27307,34303,37980,
#Deleted in new
chr5_GL339449v2_alt	18091	60471	chr5_GL339449v2_alt:18091-60471	1	+	18155	60301	789624	11	130,60,34,68,69,119,100,87,150,148,199,	0,482,17506,19692,20550,24908,27293,34289,37966,41617,42181,
#Deleted in new
chr5_GL339449v2_alt	18137	45474	chr5_GL339449v2_alt:18137-45474	0	+	18155	33975	789624	9	84,60,87,34,68,69,111,119,90,	0,436,15787,17460,19646,20504,23087,24862,27247,
#Deleted in new
chr5_GL339449v2_alt	18148	59735	chr5_GL339449v2_alt:18148-59735	2	+	18155	45434	789624	7	73,60,34,100,87,150,27,	0,425,17449,27236,34232,37909,41560,
#Deleted in new
chr5_GL339449v2_alt	18296	60504	chr5_GL339449v2_alt:18296-60504	1	+	38692	60301	789624	11	337,34,68,69,111,119,100,87,150,148,232,	0,17301,19487,20345,22928,24703,27088,34084,37761,41412,41976,
#Deleted in new
chr5_GL339449v2_alt	18322	56162	chr5_GL339449v2_alt:18322-56162	0	+	18322	18322	8553170	8	311,34,68,69,111,100,87,105,	0,17275,19461,20319,22902,27062,34058,37735,
#Deleted in new
chr5_GL339449v2_alt	64463	103660	chr5_GL339449v2_alt:64463-103660	1	-	65904	103660	789624	12	792,608,131,175,108,116,83,86,78,87,62,304,	0,1139,4048,10884,13489,18707,22546,25516,26651,29818,32685,38893,
#Deleted in new
chr5_GL339449v2_alt	64519	103703	chr5_GL339449v2_alt:64519-103703	0	-	64519	64519	8553170	6	1691,131,108,116,109,119,	0,3992,13433,18651,38837,39065,
#Deleted in new
chr5_GL339449v2_alt	65233	115923	chr5_GL339449v2_alt:65233-115923	1	-	68516	103660	789624	10	977,131,116,83,86,78,87,59,344,45,	0,3278,17937,21776,24746,25881,29048,31915,38123,50645,
#Deleted in new
chr5_GL339449v2_alt	65652	115907	chr5_GL339449v2_alt:65652-115907	3	-	65904	94359	789624	13	558,131,175,108,116,83,86,78,87,59,109,116,29,	0,2859,9695,12300,17518,21357,24327,25462,28629,31496,37704,37932,50226,
#Deleted in new
chr5_GL339449v2_alt	65904	103660	chr5_GL339449v2_alt:65904-103660	1	-	65904	103660	789624	11	306,131,175,108,116,83,86,78,87,62,304,	0,2607,9443,12048,17266,21105,24075,25210,28377,31244,37452,
#Deleted in new
chr5_GL339449v2_alt	90830	106967	chr5_GL339449v2_alt:90830-106967	0	-	90830	90830	8553170	3	3538,344,45,	0,12526,16092,
#Deleted in new
chr5_GL339449v2_alt	96534	97036	chr5_GL339449v2_alt:96534-97036	7	-	96534	96534	16724991	1	502,	0,
#Deleted in new
chr5_GL339449v2_alt	96801	103700	chr5_GL339449v2_alt:96801-103700	0	-	96801	96801	8553170	3	269,62,344,	0,347,6555,
#Deleted in new
chr5_GL339449v2_alt	117042	117363	chr5_GL339449v2_alt:117042-117363	7	+	117042	117042	16724991	1	321,	0,
#Deleted in new
chr5_GL339449v2_alt	133128	133638	chr5_GL339449v2_alt:133128-133638	7	+	133128	133128	16724991	1	510,	0,
#Deleted in new
chr5_GL339449v2_alt	134176	152738	chr5_GL339449v2_alt:134176-152738	1	-	135253	152686	0	5	1270,146,59,93,80,	0,4666,4912,15521,18482,
#Deleted in new
chr5_GL339449v2_alt	134837	152699	chr5_GL339449v2_alt:134837-152699	1	-	135423	152686	789624	3	609,93,41,	0,14860,17821,
#Deleted in new
chr5_GL339449v2_alt	134918	153209	chr5_GL339449v2_alt:134918-153209	1	-	135253	152871	0	5	528,146,59,93,357,	0,3924,4170,14779,17934,
#Deleted in new
chr5_GL339449v2_alt	135122	152716	chr5_GL339449v2_alt:135122-152716	3	-	135253	152686	789624	4	324,146,59,58,	0,3720,3966,17536,
#Deleted in new
chr5_GL339449v2_alt	138685	152686	chr5_GL339449v2_alt:138685-152686	1	-	138838	152686	789624	4	303,59,93,28,	0,403,11012,13973,
#Deleted in new
chr5_GL339449v2_alt	147937	150016	chr5_GL339449v2_alt:147937-150016	1	-	148137	148932	789624	2	1012,319,	0,1760,
#Deleted in new
chr5_GL339449v2_alt	147938	153209	chr5_GL339449v2_alt:147938-153209	3	-	148137	148932	789624	3	1011,93,357,	0,1759,4914,
#Deleted in new
chr5_GL339449v2_alt	147939	152838	chr5_GL339449v2_alt:147939-152838	1	-	148137	148932	789624	3	1010,93,180,	0,1758,4719,
#Deleted in new
chr5_GL339449v2_alt	148339	152686	chr5_GL339449v2_alt:148339-152686	0	-	148339	148932	789624	3	610,93,263,	0,1358,4084,
#Deleted in new
chr5_GL339449v2_alt	148433	152512	chr5_GL339449v2_alt:148433-152512	0	-	148433	148932	789624	3	516,93,152,	0,1264,3927,
#Deleted in new
chr5_GL339449v2_alt	148525	151105	chr5_GL339449v2_alt:148525-151105	0	-	148525	148932	789624	3	424,93,71,	0,1172,2509,
#Deleted in new
chr5_GL339449v2_alt	148551	152673	chr5_GL339449v2_alt:148551-152673	0	-	148551	148932	789624	3	398,93,91,	0,1146,4031,
#Deleted in new
chr5_GL339449v2_alt	148626	152358	chr5_GL339449v2_alt:148626-152358	0	-	148626	148932	789624	3	323,93,338,	0,1071,3394,
#Deleted in new
chr5_GL339449v2_alt	152488	165412	chr5_GL339449v2_alt:152488-165412	0	+	152488	152488	8553170	5	172,21,61,84,126,	0,2738,2861,5325,12798,
#Deleted in new
chr5_GL339449v2_alt	152492	198224	chr5_GL339449v2_alt:152492-198224	3	+	155401	197715	789624	18	168,137,184,258,84,157,137,53,126,70,112,183,86,147,150,121,58,771,	0,1738,2734,4523,5321,12794,15690,16936,17073,17289,19928,22727,24051,24250,27300,30958,41416,44961,
#Deleted in new
chr5_GL339449v2_alt	152505	157068	chr5_GL339449v2_alt:152505-157068	0	+	155401	157068	789624	4	155,104,184,53,	0,2141,2721,4510,
#Deleted in new
chr5_GL339449v2_alt	153001	198224	chr5_GL339449v2_alt:153001-198224	1	+	154708	197715	789624	18	479,137,104,258,84,157,137,53,126,70,112,183,86,147,150,121,58,771,	0,1229,1645,4014,4812,12285,15181,16427,16564,16780,19419,22218,23542,23741,26791,30449,40907,44452,
#Deleted in new
chr5_GL339449v2_alt	153007	198224	chr5_GL339449v2_alt:153007-198224	1	+	155401	197715	789624	19	122,137,104,184,258,84,157,137,53,126,70,112,183,86,147,150,121,58,771,	0,1223,1639,2219,4008,4806,12279,15175,16421,16558,16774,19413,22212,23536,23735,26785,30443,40901,44446,
#Deleted in new
chr5_GL339449v2_alt	153013	154662	chr5_GL339449v2_alt:153013-154662	0	+	153013	153013	8553170	3	467,88,16,	0,1266,1633,
#Deleted in new
chr5_GL339449v2_alt	153015	197783	chr5_GL339449v2_alt:153015-197783	1	+	165430	197715	789624	17	114,137,258,84,157,137,53,126,70,112,183,86,147,150,121,58,330,	0,1215,4000,4798,12271,15167,16413,16550,16766,19405,22204,23528,23727,26777,30435,40893,44438,
#Deleted in new
chr5_GL339449v2_alt	153016	197916	chr5_GL339449v2_alt:153016-197916	0	+	153016	153016	8553170	4	113,137,37,463,	0,1214,40913,44437,
#Deleted in new
chr5_GL339449v2_alt	153020	198224	chr5_GL339449v2_alt:153020-198224	1	+	155401	197715	789624	18	109,137,184,258,84,157,137,53,126,70,112,183,86,147,150,121,58,771,	0,1210,2206,3995,4793,12266,15162,16408,16545,16761,19400,22199,23523,23722,26772,30430,40888,44433,
#Deleted in new
chr5_GL339449v2_alt	153037	198224	chr5_GL339449v2_alt:153037-198224	1	+	155401	197715	789624	17	92,184,258,84,157,137,53,126,70,112,183,86,147,150,121,58,771,	0,2189,3978,4776,12249,15145,16391,16528,16744,19383,22182,23506,23705,26755,30413,40871,44416,
#Deleted in new
chr5_GL339449v2_alt	153255	198222	chr5_GL339449v2_alt:153255-198222	1	+	155401	197715	789624	18	225,137,184,258,84,157,137,53,126,70,112,183,86,147,150,121,58,769,	0,975,1971,3760,4558,12031,14927,16173,16310,16526,19165,21964,23288,23487,26537,30195,40653,44198,
#Deleted in new
chr5_GL339449v2_alt	153287	168319	chr5_GL339449v2_alt:153287-168319	0	+	165430	168319	789624	6	193,137,258,84,157,137,	0,943,3728,4526,11999,14895,
#Deleted in new
chr5_GL339449v2_alt	153441	165443	chr5_GL339449v2_alt:153441-165443	0	+	155401	165443	789624	6	39,137,184,258,84,157,	0,789,1785,3574,4372,11845,
#Deleted in new
chr5_GL339449v2_alt	153900	198224	chr5_GL339449v2_alt:153900-198224	1	+	155401	197715	789624	17	467,184,258,84,157,137,53,126,70,112,183,86,147,150,121,58,771,	0,1326,3115,3913,11386,14282,15528,15665,15881,18520,21319,22643,22842,25892,29550,40008,43553,
#Deleted in new
chr5_GL339449v2_alt	154230	197783	chr5_GL339449v2_alt:154230-197783	1	+	155401	197715	789624	16	137,184,84,157,137,53,126,70,112,183,86,147,150,121,58,330,	0,996,3583,11056,13952,15198,15335,15551,18190,20989,22313,22512,25562,29220,39678,43223,
#Deleted in new
chr5_GL339449v2_alt	154230	198222	chr5_GL339449v2_alt:154230-198222	1	+	165430	197715	789624	16	137,258,84,157,137,53,126,70,112,183,86,147,150,121,58,769,	0,2785,3583,11056,13952,15198,15335,15551,18190,20989,22313,22512,25562,29220,39678,43223,
#Deleted in new
chr5_GL339449v2_alt	154646	197724	chr5_GL339449v2_alt:154646-197724	1	+	154708	197715	789624	16	104,258,84,157,137,53,126,70,112,183,86,147,150,121,58,271,	0,2369,3167,10640,13536,14782,14919,15135,17774,20573,21897,22096,25146,28804,39262,42807,
#Deleted in new
chr5_GL339449v2_alt	167465	175308	chr5_GL339449v2_alt:167465-175308	0	+	167465	167465	8553170	7	118,137,53,126,70,112,89,	0,717,1963,2100,2316,4955,7754,
#Deleted in new
chr5_GL339449v2_alt	169608	176889	chr5_GL339449v2_alt:169608-176889	0	+	169608	176209	789624	7	83,70,112,183,122,86,147,	0,173,2812,5611,6551,6935,7134,
#Deleted in new
chr5_GL339449v2_alt	175356	197678	chr5_GL339449v2_alt:175356-197678	0	+	175356	197458	789624	6	46,86,147,150,121,225,	0,1187,1386,4436,8094,22097,
#Deleted in new
chr5_GL339449v2_alt	198534	225025	chr5_GL339449v2_alt:198534-225025	1	+	202808	224623	0	7	59,1161,36,149,172,51,525,	0,4259,9489,16973,17368,24884,25966,
#Deleted in new
chr5_GL339449v2_alt	198549	227323	chr5_GL339449v2_alt:198549-227323	1	+	202808	224623	0	6	44,1161,149,172,51,2823,	0,4244,16958,17353,24869,25951,
#Deleted in new
chr5_GL339449v2_alt	198651	203244	chr5_GL339449v2_alt:198651-203244	2	+	202808	203244	789624	2	125,451,	0,4142,
#Deleted in new
chr5_GL339449v2_alt	198804	223465	chr5_GL339449v2_alt:198804-223465	0	+	202808	223465	789624	6	343,1161,36,149,172,47,	0,3989,9219,16703,17098,24614,
#Deleted in new
chr5_GL339449v2_alt	202790	224839	chr5_GL339449v2_alt:202790-224839	1	+	202808	224623	789624	7	743,73,36,149,172,51,339,	0,1091,5233,12717,13112,20628,21710,
#Deleted in new
chr5_GL339449v2_alt	202790	226126	chr5_GL339449v2_alt:202790-226126	1	+	202808	224623	789624	8	743,73,36,149,172,51,285,75,	0,1091,5233,12717,13112,20628,21710,23261,
#Deleted in new
chr5_GL339449v2_alt	252769	253023	chr5_GL339449v2_alt:252769-253023	7	+	252769	252769	16724991	1	254,	0,
#Deleted in new
chr5_GL339449v2_alt	260374	285363	chr5_GL339449v2_alt:260374-285363	0	-	260374	260374	8553170	2	204,93,	0,24896,
#Deleted in new
chr5_GL339449v2_alt	260382	268513	chr5_GL339449v2_alt:260382-268513	3	-	260382	260382	789624	2	196,130,	0,8001,
#Deleted in new
chr5_GL339449v2_alt	261897	262166	chr5_GL339449v2_alt:261897-262166	3	-	261897	261897	8553170	1	269,	0,
#Deleted in new
chr5_GL339449v2_alt	275188	339606	chr5_GL339449v2_alt:275188-339606	3	+	287141	336616	789624	9	368,118,679,162,146,216,172,42,3092,	0,11885,16849,21659,42449,52659,55683,59300,61326,
#Deleted in new
chr5_GL339449v2_alt	275686	336616	chr5_GL339449v2_alt:275686-336616	1	+	287141	336616	789624	9	111,118,679,162,146,216,172,42,102,	0,11387,16351,21161,41951,52161,55185,58802,60828,
#Deleted in new
chr5_GL339449v2_alt	287097	336657	chr5_GL339449v2_alt:287097-336657	0	+	287141	296942	789624	8	94,248,162,146,216,172,42,143,	0,4940,9750,30540,40750,43774,47391,49417,
#Deleted in new
chr5_GL339449v2_alt	287097	336657	chr5_GL339449v2_alt:287097-336657	1	+	287141	336616	789624	8	94,679,162,146,216,172,42,143,	0,4940,9750,30540,40750,43774,47391,49417,
#Deleted in new
chr5_GL339449v2_alt	313552	313657	chr5_GL339449v2_alt:313552-313657	3	-	313552	313552	8553170	1	105,	0,
#Deleted in new
chr5_GL339449v2_alt	327635	336942	chr5_GL339449v2_alt:327635-336942	0	+	327635	327635	8553170	5	98,216,172,42,428,	0,212,3236,6853,8879,
#Deleted in new
chr5_GL339449v2_alt	327687	336656	chr5_GL339449v2_alt:327687-336656	0	+	327687	327687	8553170	4	376,172,42,142,	0,3184,6801,8827,
#Deleted in new
chr5_GL339449v2_alt	340676	342255	chr5_GL339449v2_alt:340676-342255	3	-	340676	342255	789624	3	12,37,26,	0,437,1553,
#Deleted in new
chr5_GL339449v2_alt	343155	355815	chr5_GL339449v2_alt:343155-355815	0	+	343155	343155	8553170	8	35,89,78,37,87,51,55,428,	0,4894,5925,6382,6760,7520,7946,12232,
#Deleted in new
chr5_GL339449v2_alt	343168	350339	chr5_GL339449v2_alt:343168-350339	0	+	343168	343168	8553170	5	183,89,78,37,424,	0,4881,5912,6369,6747,
#Deleted in new
chr5_GL339449v2_alt	343170	362755	chr5_GL339449v2_alt:343170-362755	0	+	343170	343170	8553170	10	181,89,78,37,87,51,55,106,397,25,	0,4879,5910,6367,6745,7505,7931,12217,18515,19560,
#Deleted in new
chr5_GL339449v2_alt	343189	375736	chr5_GL339449v2_alt:343189-375736	3	+	348082	375161	0	16	162,89,78,37,87,51,55,106,91,88,108,64,104,103,40,695,	0,4860,5891,6348,6726,7486,7912,12198,18496,18805,19541,22148,25368,26028,30101,31852,
#Deleted in new
chr5_GL339449v2_alt	343192	375209	chr5_GL339449v2_alt:343192-375209	1	+	348082	375161	789624	8	159,89,78,37,87,51,55,56,	0,4857,5888,6345,6723,7483,7909,31961,
#Deleted in new
chr5_GL339449v2_alt	343194	375488	chr5_GL339449v2_alt:343194-375488	1	+	348082	375161	0	17	157,98,89,78,37,87,51,55,106,91,88,108,64,104,103,40,447,	0,2429,4855,5886,6343,6721,7481,7907,12193,18491,18800,19536,22143,25363,26023,30096,31847,
#Deleted in new
chr5_GL339449v2_alt	343196	348091	chr5_GL339449v2_alt:343196-348091	0	+	348082	348091	8553170	2	353,42,	0,4853,
#Deleted in new
chr5_GL339449v2_alt	343206	348094	chr5_GL339449v2_alt:343206-348094	0	+	348082	348094	8553170	3	343,98,45,	0,2417,4843,
#Deleted in new
chr5_GL339449v2_alt	343243	375823	chr5_GL339449v2_alt:343243-375823	0	+	348082	349937	789624	15	108,89,78,87,51,55,106,91,88,108,64,104,103,40,782,	0,4806,5837,6672,7432,7858,12144,18442,18751,19487,22094,25314,25974,30047,31798,
#Deleted in new
chr5_GL339449v2_alt	348046	363143	chr5_GL339449v2_alt:348046-363143	0	+	348046	348046	8553170	9	92,78,37,87,51,55,106,91,1149,	0,1034,1491,1869,2629,3055,7341,13639,13948,
#Deleted in new
chr5_GL339449v2_alt	348046	352970	chr5_GL339449v2_alt:348046-352970	0	+	348046	348046	8553170	6	92,78,87,51,55,1511,	0,1034,1869,2629,3055,3413,
#Deleted in new
chr5_GL339449v2_alt	348082	349436	chr5_GL339449v2_alt:348082-349436	0	+	348082	348082	8553170	2	56,356,	0,998,
#Deleted in new
chr5_GL339449v2_alt	376437	378180	chr5_GL339449v2_alt:376437-378180	3	+	376437	376437	8553170	2	231,985,	0,758,
#Deleted in new
chr5_GL339449v2_alt	385731	440474	chr5_GL339449v2_alt:385731-440474	0	+	386472	440474	0	15	500,89,126,82,52,120,100,82,58,2112,168,153,87,165,119,	0,708,4329,21256,22951,23277,26269,37223,38295,39211,45063,48031,48843,50796,54624,
#Deleted in new
chr5_GL339449v2_alt	386472	442341	chr5_GL339449v2_alt:386472-442341	3	+	386472	440720	789624	14	56,126,82,52,120,100,82,58,2112,168,153,87,165,1986,	0,3588,20515,22210,22536,25528,36482,37554,38470,44322,47290,48102,50055,53883,
#Deleted in new
chr5_GL339449v2_alt	389077	390919	chr5_GL339449v2_alt:389077-390919	3	-	389077	389077	8553170	1	1842,	0,
#Deleted in new
chr5_GL339449v2_alt	390070	412702	chr5_GL339449v2_alt:390070-412702	0	+	390070	390070	8553170	5	116,82,52,120,702,	0,16917,18612,18938,21930,
#Deleted in new
chr5_GL339449v2_alt	390114	407247	chr5_GL339449v2_alt:390114-407247	0	+	397928	399086	789624	5	72,571,75,100,260,	0,7811,8943,9355,16873,
#Deleted in new
chr5_GL339449v2_alt	390134	440774	chr5_GL339449v2_alt:390134-440774	1	+	397928	440720	789624	14	52,571,100,82,52,120,100,82,58,2112,153,87,165,419,	0,7791,9335,16853,18548,18874,21866,32820,33892,34808,43628,44440,46393,50221,
#Deleted in new
chr5_GL339449v2_alt	390134	440771	chr5_GL339449v2_alt:390134-440771	1	+	397928	440720	0	15	52,571,100,82,52,120,100,82,58,2112,168,153,87,165,416,	0,7791,9335,16853,18548,18874,21866,32820,33892,34808,40660,43628,44440,46393,50221,
#Deleted in new
chr5_GL339449v2_alt	399071	407511	chr5_GL339449v2_alt:399071-407511	0	+	399071	399086	8553170	4	61,100,82,247,	0,398,7916,8193,
#Deleted in new
chr5_GL339449v2_alt	424292	442341	chr5_GL339449v2_alt:424292-442341	0	+	424292	424292	8553170	6	2762,168,153,87,165,1986,	0,6502,9470,10282,12235,16063,
#Deleted in new
chr5_GL339449v2_alt	434592	440577	chr5_GL339449v2_alt:434592-440577	0	+	434592	440577	789624	4	69,165,123,222,	0,1935,4657,5763,
#Deleted in new
chr5_GL339449v2_alt	443048	444315	chr5_GL339449v2_alt:443048-444315	3	-	443048	443048	8553170	1	1267,	0,
#Deleted in new
chr5_GL339449v2_alt	456848	464701	chr5_GL339449v2_alt:456848-464701	0	-	458799	464701	789624	4	761,142,54,88,	0,1362,1948,7765,
#Deleted in new
chr5_GL339449v2_alt	457774	485712	chr5_GL339449v2_alt:457774-485712	0	-	464033	485683	789624	9	578,109,111,96,153,201,120,72,110,	0,6201,6839,8260,10143,10455,11505,14103,27828,
#Deleted in new
chr5_GL339449v2_alt	457778	485713	chr5_GL339449v2_alt:457778-485713	3	-	458799	485683	0	9	574,54,111,96,153,201,120,72,111,	0,1018,6835,8256,10139,10451,11501,14099,27824,
#Deleted in new
chr5_GL339449v2_alt	457778	485705	chr5_GL339449v2_alt:457778-485705	1	-	458799	485683	0	8	574,54,111,153,201,120,72,103,	0,1018,6835,10139,10451,11501,14099,27824,
#Deleted in new
chr5_GL339449v2_alt	458443	468070	chr5_GL339449v2_alt:458443-468070	0	-	458443	458443	8553170	3	407,111,153,	0,6170,9474,
#Deleted in new
chr5_GL339449v2_alt	458664	485731	chr5_GL339449v2_alt:458664-485731	1	-	458799	485683	789624	7	186,111,96,153,120,72,129,	0,5949,7370,9253,10615,13213,26938,
#Deleted in new
chr5_GL339449v2_alt	458784	485683	chr5_GL339449v2_alt:458784-485683	1	-	458799	485683	0	7	66,111,153,201,120,72,81,	0,5829,9133,9445,10495,13093,26818,
#Deleted in new
chr5_GL339449v2_alt	458784	485683	chr5_GL339449v2_alt:458784-485683	1	-	458799	485683	0	8	66,111,96,153,201,120,72,81,	0,5829,7250,9133,9445,10495,13093,26818,
#Deleted in new
chr5_GL339449v2_alt	464033	485683	chr5_GL339449v2_alt:464033-485683	1	-	464033	485683	789624	8	51,111,96,153,201,120,72,81,	0,580,2001,3884,4196,5246,7844,21569,
#Deleted in new
chr5_GL339449v2_alt	464515	468070	chr5_GL339449v2_alt:464515-468070	0	-	464515	464515	8553170	3	209,96,153,	0,1519,3402,
#Deleted in new
chr5_GL339449v2_alt	464611	466132	chr5_GL339449v2_alt:464611-466132	0	-	464611	464611	8553170	2	113,98,	0,1423,
#Deleted in new
chr5_GL339449v2_alt	466034	468280	chr5_GL339449v2_alt:466034-468280	0	-	466303	468280	789624	4	96,117,153,51,	0,188,1883,2195,
#Deleted in new
chr5_GL339449v2_alt	477954	479567	chr5_GL339449v2_alt:477954-479567	3	+	477954	477954	8553170	1	1613,	0,
#Deleted in new
chr5_GL339449v2_alt	492255	510121	chr5_GL339449v2_alt:492255-510121	1	-	493628	509938	789624	3	1590,109,190,	0,16619,17676,
#Deleted in new
chr5_GL339449v2_alt	492265	510017	chr5_GL339449v2_alt:492265-510017	1	-	493606	509938	789624	4	1363,108,109,86,	0,1472,16609,17666,
#Deleted in new
chr5_GL339449v2_alt	493360	509856	chr5_GL339449v2_alt:493360-509856	1	-	493628	508948	789624	3	485,109,198,	0,15514,16298,
#Deleted in new
chr5_GL339449v2_alt	502685	510143	chr5_GL339449v2_alt:502685-510143	1	-	502994	509938	789624	3	382,109,212,	0,6189,7246,
#Deleted in new
chr5_GL339449v2_alt	502687	509126	chr5_GL339449v2_alt:502687-509126	1	-	502994	508948	789624	2	380,252,	0,6187,
#Deleted in new
chr5_GL339449v2_alt	502888	509803	chr5_GL339449v2_alt:502888-509803	1	-	502994	508948	789624	3	179,109,145,	0,5986,6770,
#Deleted in new
chr5_GL339449v2_alt	505264	510034	chr5_GL339449v2_alt:505264-510034	1	-	505509	509938	789624	3	357,109,103,	0,3610,4667,
#Deleted in new
chr5_GL339449v2_alt	508874	509827	chr5_GL339449v2_alt:508874-509827	2	-	508874	508948	789624	3	109,60,169,	0,462,784,
#Deleted in new
chr5_GL339449v2_alt	538258	545697	chr5_GL339449v2_alt:538258-545697	5	-	538258	538258	16724991	2	326,85,	0,7354,
#Deleted in new
chr5_GL339449v2_alt	538423	557213	chr5_GL339449v2_alt:538423-557213	4	-	538423	538423	16724991	2	161,528,	0,18262,
#Deleted in new
chr5_GL339449v2_alt	541839	542823	chr5_GL339449v2_alt:541839-542823	3	-	541839	541839	8553170	1	984,	0,
#Deleted in new
chr5_GL339449v2_alt	544747	545454	chr5_GL339449v2_alt:544747-545454	3	-	544747	544747	8553170	1	707,	0,
#Deleted in new
chr5_GL339449v2_alt	547731	631980	chr5_GL339449v2_alt:547731-631980	7	-	547731	547731	16724991	11	174,594,115,105,163,93,136,175,85,188,2486,	0,8954,12159,63411,63604,66795,67172,71780,73793,77462,81763,
#Deleted in new
chr5_GL339449v2_alt	550094	551950	chr5_GL339449v2_alt:550094-551950	3	-	550094	550094	8553170	1	1856,	0,
#Deleted in new
chr5_GL339449v2_alt	550243	550538	chr5_GL339449v2_alt:550243-550538	7	+	550243	550243	16724991	1	295,	0,
#Deleted in new
chr5_GL339449v2_alt	597733	598171	chr5_GL339449v2_alt:597733-598171	3	-	597733	597733	8553170	1	438,	0,
#Deleted in new
chr5_GL339449v2_alt	609545	610128	chr5_GL339449v2_alt:609545-610128	3	-	609545	609545	8553170	1	583,	0,
#Deleted in new
chr5_GL339449v2_alt	619585	625381	chr5_GL339449v2_alt:619585-625381	5	-	619585	619585	16724991	3	101,85,188,	0,1939,5608,
#Deleted in new
chr5_GL339449v2_alt	639235	681428	chr5_GL339449v2_alt:639235-681428	5	-	639235	639235	16724991	4	908,85,188,115,	0,2746,6419,42078,
#Deleted in new
chr5_GL339449v2_alt	640042	645842	chr5_GL339449v2_alt:640042-645842	7	-	640042	640042	16724991	3	101,85,188,	0,1939,5612,
#Deleted in new
chr5_GL339449v2_alt	847224	897013	chr5_GL339449v2_alt:847224-897013	7	+	847224	847224	16724991	4	83,34,156,1126,	0,29626,31125,48663,
#Deleted in new
chr5_GL339449v2_alt	878456	917372	chr5_GL339449v2_alt:878456-917372	5	+	878456	878456	16724991	4	49,188,85,101,	0,33114,36892,38815,
#Deleted in new
chr5_GL339449v2_alt	934105	951050	chr5_GL339449v2_alt:934105-951050	7	-	934105	934105	16724991	5	703,120,52,82,116,	0,3593,3987,5660,16829,
#Deleted in new
chr5_GL339449v2_alt	934712	939847	chr5_GL339449v2_alt:934712-939847	5	-	934712	934712	16724991	4	96,120,52,82,	0,2986,3380,5053,
#Deleted in new
chr5_GL339449v2_alt	962950	964695	chr5_GL339449v2_alt:962950-964695	3	-	962950	962950	8553170	2	987,231,	0,1514,
#Deleted in new
chr5_GL339449v2_alt	965309	997849	chr5_GL339449v2_alt:965309-997849	0	-	991159	993014	789624	15	782,40,103,104,64,108,88,91,106,55,51,87,78,89,110,	0,2493,6468,7127,10392,12957,13713,14019,20286,24631,25061,25785,26629,27649,32430,
#Deleted in new
chr5_GL339449v2_alt	965641	997874	chr5_GL339449v2_alt:965641-997874	1	-	965971	993014	789624	16	450,40,103,104,64,108,88,91,106,55,51,87,37,78,89,135,	0,2161,6136,6795,10060,12625,13381,13687,19954,24299,24729,25453,25881,26297,27317,32098,
#Deleted in new
chr5_GL339449v2_alt	965644	997896	chr5_GL339449v2_alt:965644-997896	3	-	965971	993014	789624	17	447,40,103,104,64,108,88,91,106,55,51,87,37,78,89,98,157,	0,2158,6133,6792,10057,12622,13378,13684,19951,24296,24726,25450,25878,26294,27314,29731,32095,
#Deleted in new
chr5_GL339449v2_alt	977736	997920	chr5_GL339449v2_alt:977736-997920	0	-	977736	977736	8553170	11	1374,91,10,106,55,51,87,37,78,89,20,	0,1592,2594,7859,12204,12634,13358,13786,14202,15222,20164,
#Deleted in new
chr5_GL339449v2_alt	978349	997920	chr5_GL339449v2_alt:978349-997920	0	-	978349	978349	8553170	10	25,397,106,55,51,87,37,78,89,181,	0,673,7246,11591,12021,12745,13173,13589,14609,19390,
#Deleted in new
chr5_GL339449v2_alt	985302	997934	chr5_GL339449v2_alt:985302-997934	1	-	985567	993014	789624	8	399,55,51,87,37,78,89,34,	0,4638,5068,5792,6220,6636,7656,12598,
#Deleted in new
chr5_GL339449v2_alt	988134	997920	chr5_GL339449v2_alt:988134-997920	0	-	991159	993014	789624	7	1493,55,51,87,78,89,20,	0,1806,2236,2960,3804,4824,9766,
#Deleted in new
chr5_GL339449v2_alt	1004471	1023458	chr5_GL339449v2_alt:1004471-1023458	7	-	1004471	1004471	16724991	5	101,42,172,216,146,	0,2085,5572,8552,18841,
#Deleted in new
chr5_GL339449v2_alt	1033161	1059004	chr5_GL339449v2_alt:1033161-1059004	7	-	1033161	1033161	16724991	9	77,168,2111,58,82,100,120,52,82,	0,1846,5763,8732,9780,20714,23683,24077,25761,
#Deleted in new
chr5_GL339449v2_alt	1063243	1063538	chr5_GL339449v2_alt:1063243-1063538	7	+	1063243	1063243	16724991	1	295,	0,
#Deleted in new
chr5_GL339449v2_alt	1127875	1138342	chr5_GL339449v2_alt:1127875-1138342	7	-	1127875	1127875	16724991	4	136,175,85,188,	0,4609,6622,10279,
#Deleted in new
chr5_GL339449v2_alt	1350361	1444827	chr5_GL339449v2_alt:1350361-1444827	3	-	1350361	1350361	789624	2	2066,698,	0,93768,
#Deleted in new
chr5_GL339449v2_alt	1351991	1444821	chr5_GL339449v2_alt:1351991-1444821	0	-	1351991	1351991	8553170	3	436,141,387,	0,92138,92443,
#Deleted in new
chr5_GL339449v2_alt	1371178	1373401	chr5_GL339449v2_alt:1371178-1373401	3	-	1371178	1371178	8553170	3	354,87,60,	0,1920,2163,
#Deleted in new
chr5_GL339449v2_alt	1374288	1384497	chr5_GL339449v2_alt:1374288-1384497	7	+	1374288	1374288	16724991	4	231,1293,138,178,	0,501,9511,10031,
#Deleted in new
chr5_GL339449v2_alt	1374288	1384298	chr5_GL339449v2_alt:1374288-1384298	5	+	1374288	1374288	16724991	4	231,1293,138,254,	0,501,9511,9756,
#Deleted in new
chr5_GL339449v2_alt	1374332	1374839	chr5_GL339449v2_alt:1374332-1374839	5	+	1374332	1374332	16724991	2	187,50,	0,457,
#Deleted in new
chr5_GL339449v2_alt	1376005	1377735	chr5_GL339449v2_alt:1376005-1377735	4	+	1376005	1376005	16724991	2	77,759,	0,971,
#Deleted in new
chr5_GL339449v2_alt	1444100	1445054	chr5_GL339449v2_alt:1444100-1445054	3	+	1444100	1444100	8553170	2	57,510,	0,444,
#Deleted in new
chr5_GL339449v2_alt	1454099	1566305	chr5_GL339449v2_alt:1454099-1566305	1	+	1454362	1563370	0	39	475,277,110,60,126,134,95,55,144,279,148,159,157,92,193,131,1687,188,223,179,211,131,202,194,385,120,37,93,229,161,151,181,64,187,205,40,256,247,3067,	0,2964,6202,8443,10481,11739,14780,28227,30869,33789,35369,39635,41655,45947,46984,49006,53850,56626,57570,59329,60446,61707,66674,67141,68324,76693,83427,83942,85839,86490,88742,89424,93067,93805,97501,101271,104367,106659,109139,
#Deleted in new
chr5_GL339449v2_alt	1454143	1508220	chr5_GL339449v2_alt:1454143-1508220	1	+	1454362	1508119	789624	18	431,277,110,60,126,134,95,55,144,279,148,159,157,92,193,131,139,131,	0,2920,6158,8399,10437,11695,14736,28183,30825,33745,35325,39591,41611,45903,46940,48962,53806,53946,
#Deleted in new
chr5_GL339449v2_alt	1454170	1543962	chr5_GL339449v2_alt:1454170-1543962	0	+	1454170	1454170	8553170	32	404,277,110,60,126,134,95,55,144,279,148,159,157,92,193,131,1687,188,223,179,211,131,202,194,385,120,37,93,229,161,151,439,	0,2893,6131,8372,10410,11668,14709,28156,30798,33718,35298,39564,41584,45876,46913,48935,53779,56555,57499,59258,60375,61636,66603,67070,68253,76622,83356,83871,85768,86419,88671,89353,
#Deleted in new
chr5_GL339449v2_alt	1474245	1474801	chr5_GL339449v2_alt:1474245-1474801	7	-	1474245	1474245	16724991	1	556,	0,
#Deleted in new
chr5_GL339449v2_alt	1492949	1509835	chr5_GL339449v2_alt:1492949-1509835	0	+	1492949	1492949	8553170	6	944,157,92,193,131,1886,	0,2805,7097,8134,10156,15000,
#Deleted in new
chr5_GL339449v2_alt	1503213	1525105	chr5_GL339449v2_alt:1503213-1525105	0	+	1503213	1503213	8553170	2	373,97,	0,21795,
#Deleted in new
chr5_GL339449v2_alt	1521277	1566305	chr5_GL339449v2_alt:1521277-1566305	0	+	1521277	1551776	789624	16	157,385,120,37,93,226,161,151,181,64,205,40,256,247,121,3067,	0,1146,9515,16249,16764,18664,19312,21564,22246,25889,30323,34093,37189,39481,39982,41961,
#Deleted in new
chr5_GL339449v2_alt	1530858	1566305	chr5_GL339449v2_alt:1530858-1566305	2	+	1530858	1561271	789624	14	54,37,226,161,151,181,64,187,205,40,256,247,121,3067,	0,6668,9083,9731,11983,12665,16308,17046,20742,24512,27608,29900,30401,32380,
#Deleted in new
chr5_GL339449v2_alt	1536136	1536331	chr5_GL339449v2_alt:1536136-1536331	7	-	1536136	1536136	16724991	1	195,	0,
#Deleted in new
chr5_GL339449v2_alt	1585781	1602953	chr5_GL339449v2_alt:1585781-1602953	3	+	1585910	1602953	789624	6	258,67,85,102,128,113,	0,5629,8983,12362,15209,17059,
#Deleted in new
chr5_GL339449v2_alt	1585814	1602953	chr5_GL339449v2_alt:1585814-1602953	0	+	1585910	1602953	789624	6	225,67,85,102,128,113,	0,5596,8950,12329,15176,17026,
#Deleted in new
chr5_GL339449v2_alt	1591355	1601550	chr5_GL339449v2_alt:1591355-1601550	0	+	1591355	1591355	8553170	4	122,85,102,560,	0,3409,6788,9635,
#Deleted in new
chr5_GL339449v2_alt	1594754	1602953	chr5_GL339449v2_alt:1594754-1602953	0	+	1594754	1594754	8553170	4	95,102,128,113,	0,3389,6236,8086,
#Deleted in new
chr5_GL339449v2_alt	1600993	1602953	chr5_GL339449v2_alt:1600993-1602953	0	+	1600993	1600993	8553170	2	125,113,	0,1847,
#Deleted in new
chr5_GL339449v2_alt	1602864	1602953	chr5_GL339449v2_alt:1602864-1602953	0	+	1602864	1602864	8553170	1	89,	0,
#Deleted in new
chr5_GL383531v1_alt	69132	69235	chr5_GL383531v1_alt:69132-69235	3	-	69132	69132	8553170	1	103,	0,
#Deleted in new
chr5_GL383531v1_alt	119780	122748	chr5_GL383531v1_alt:119780-122748	3	+	119780	119780	8553170	2	40,560,	0,2408,
#Deleted in new
chr5_GL383532v1_alt	32711	77603	chr5_GL383532v1_alt:32711-77603	3	-	32711	32711	8553170	2	102,93,	0,44799,
#Deleted in new
chr5_GL949742v1_alt	42886	43001	chr5_GL949742v1_alt:42886-43001	3	+	42886	42886	8553170	1	115,	0,
#Deleted in new
chr5_GL949742v1_alt	77261	77820	chr5_GL949742v1_alt:77261-77820	7	+	77261	77261	16724991	2	166,94,	0,465,
#Deleted in new
chr5_GL949742v1_alt	115885	134841	chr5_GL949742v1_alt:115885-134841	3	+	115885	115885	8553170	4	227,127,162,43,	0,2245,9956,18913,
#Deleted in new
chr5_GL949742v1_alt	115894	125868	chr5_GL949742v1_alt:115894-125868	1	+	115894	115894	8553170	4	218,127,191,27,	0,2236,2759,9947,
#Deleted in new
chr5_GL949742v1_alt	125916	126403	chr5_GL949742v1_alt:125916-126403	0	+	125916	125916	8553170	1	487,	0,
#Deleted in new
chr5_GL949742v1_alt	125918	144741	chr5_GL949742v1_alt:125918-144741	1	+	125918	125918	8553170	6	198,175,98,55,27,316,	0,8880,10881,11394,16024,18507,
#Deleted in new
chr5_GL949742v1_alt	136807	140180	chr5_GL949742v1_alt:136807-140180	0	+	136807	136807	8553170	3	90,117,190,	0,505,3183,
#Deleted in new
chr5_GL949742v1_alt	164081	188994	chr5_GL949742v1_alt:164081-188994	3	+	164081	164081	8553170	5	157,66,80,102,143,	0,1351,17161,19613,24770,
#Deleted in new
chr5_KI270791v1_alt	8169	48350	chr5_KI270791v1_alt:8169-48350	0	+	8169	46122	789624	13	143,215,113,61,59,35,55,83,126,154,99,142,2413,	0,6689,11745,13152,18117,20627,21928,24117,26918,27493,30679,34713,37768,
#Deleted in new
chr5_KI270791v1_alt	8169	53293	chr5_KI270791v1_alt:8169-53293	2	+	8169	46122	789624	16	143,215,113,61,59,35,55,83,126,154,99,142,1996,208,256,1612,	0,6689,11745,13152,18117,20627,21928,24117,26918,27493,30679,34713,37768,40206,41225,43512,
#Deleted in new
chr5_KI270791v1_alt	8169	26345	chr5_KI270791v1_alt:8169-26345	0	+	8169	8169	8553170	5	143,215,113,61,59,	0,6689,11745,13152,18117,
#Deleted in new
chr5_KI270791v1_alt	14844	21396	chr5_KI270791v1_alt:14844-21396	0	+	14844	14844	8553170	3	229,113,75,	0,5070,6477,
#Deleted in new
chr5_KI270791v1_alt	14994	30297	chr5_KI270791v1_alt:14994-30297	0	+	14994	14994	8553170	6	79,113,61,59,35,200,	0,4920,6327,11292,13802,15103,
#Deleted in new
chr5_KI270791v1_alt	35088	46122	chr5_KI270791v1_alt:35088-46122	1	+	35088	46122	789624	5	125,154,99,142,185,	0,574,3760,7794,10849,
#Deleted in new
chr5_KI270791v1_alt	42447	48344	chr5_KI270791v1_alt:42447-48344	0	+	42447	42447	8553170	3	145,142,2407,	0,435,3490,
#Deleted in new
chr5_KI270791v1_alt	64342	121219	chr5_KI270791v1_alt:64342-121219	3	+	66575	119274	789624	15	83,331,132,235,139,135,104,125,113,129,100,101,168,72,1969,	0,2188,3940,12732,24509,25820,30330,31716,38311,39817,40541,43378,46577,48680,54908,
#Deleted in new
chr5_KI270791v1_alt	94295	96133	chr5_KI270791v1_alt:94295-96133	0	+	94295	94295	8553170	2	481,75,	0,1763,
#Deleted in new
chr5_KI270791v1_alt	112701	119980	chr5_KI270791v1_alt:112701-119980	0	+	112701	112701	8553170	3	148,72,730,	0,321,6549,
#Deleted in new
chr5_KI270791v1_alt	127599	130850	chr5_KI270791v1_alt:127599-130850	3	+	127599	127599	8553170	1	3251,	0,
#Deleted in new
chr5_KI270791v1_alt	133941	150427	chr5_KI270791v1_alt:133941-150427	3	+	133941	133941	789624	2	506,1110,	0,15376,
#Deleted in new
chr5_KI270791v1_alt	133960	150383	chr5_KI270791v1_alt:133960-150383	0	+	133960	133960	8553170	2	384,1066,	0,15357,
#Deleted in new
chr5_KI270791v1_alt	143063	143466	chr5_KI270791v1_alt:143063-143466	7	+	143063	143063	16724991	1	403,	0,
#Deleted in new
chr5_KI270791v1_alt	145613	149895	chr5_KI270791v1_alt:145613-149895	0	+	145613	145613	8553170	2	76,578,	0,3704,
#Deleted in new
chr5_KI270791v1_alt	168909	195710	chr5_KI270791v1_alt:168909-195710	3	+	169167	195640	789624	17	420,101,190,146,79,118,95,85,104,66,51,83,35,56,45,116,155,	0,648,3239,6094,7117,9925,10716,13216,14716,19283,20286,21230,22188,23280,23420,24368,26646,
#Deleted in new
chr5_KI270791v1_alt	172270	195710	chr5_KI270791v1_alt:172270-195710	1	+	172284	195640	789624	14	68,146,79,118,95,81,66,51,83,35,56,45,116,155,	0,2733,3756,6564,7355,9855,15922,16925,17869,18827,19919,20059,21007,23285,
#Deleted in new
chr5_KI270791v1_alt	175690	179651	chr5_KI270791v1_alt:175690-179651	0	+	175690	175690	8553170	3	415,118,26,	0,3144,3935,
#Deleted in new
chr5_KI270791v1_alt	178853	190222	chr5_KI270791v1_alt:178853-190222	0	+	178853	178853	8553170	7	99,95,85,152,66,51,83,	0,772,3272,4724,9339,10342,11286,
#Deleted in new
chr5_KI270791v1_alt	178887	191175	chr5_KI270791v1_alt:178887-191175	0	+	178887	178887	8553170	8	65,95,85,104,66,51,83,78,	0,738,3238,4738,9305,10308,11252,12210,
#Deleted in new
chr5_KI270791v1_alt	181670	190176	chr5_KI270791v1_alt:181670-190176	0	+	181670	181670	8553170	6	224,85,104,66,51,37,	0,455,1955,6522,7525,8469,
#Deleted in new
chr5_KI270791v1_alt	182164	195710	chr5_KI270791v1_alt:182164-195710	0	+	182164	182164	8553170	8	1565,1054,83,35,56,45,116,155,	0,6028,7975,8933,10025,10165,11113,13391,
#Deleted in new
chr5_KI270791v1_alt	187572	193393	chr5_KI270791v1_alt:187572-193393	0	+	187572	187572	8553170	8	176,66,51,83,35,56,45,116,	0,620,1623,2567,3525,4617,4757,5705,
#Deleted in new
chr5_KI270791v1_alt	187753	195654	chr5_KI270791v1_alt:187753-195654	0	+	187753	187753	8553170	9	241,66,51,83,35,56,45,116,99,	0,439,1442,2386,3344,4436,4576,5524,7802,
#Deleted in new
chr5_KI270791v1_alt	188181	195710	chr5_KI270791v1_alt:188181-195710	0	+	188181	188181	8553170	8	77,51,83,35,56,45,116,155,	0,1014,1958,2916,4008,4148,5096,7374,
#Deleted in new
chr5_KI270791v1_alt	189151	192362	chr5_KI270791v1_alt:189151-192362	0	+	189151	189151	8553170	4	95,83,35,173,	0,988,1946,3038,
#Deleted in new
chr5_KI270791v1_alt	189971	193325	chr5_KI270791v1_alt:189971-193325	0	+	189971	189971	8553170	4	251,35,185,48,	0,1126,2218,3306,
#Deleted in new
chr5_KI270791v1_alt	190178	193801	chr5_KI270791v1_alt:190178-193801	0	+	190178	190178	8553170	5	44,35,56,45,524,	0,919,2011,2151,3099,
#Deleted in new
chr5_KI270791v1_alt	191093	193394	chr5_KI270791v1_alt:191093-193394	0	+	191093	191093	8553170	3	39,185,117,	0,1096,2184,
#Deleted in new
chr5_KI270791v1_alt	192179	195710	chr5_KI270791v1_alt:192179-195710	0	+	192179	192179	8553170	4	66,45,116,155,	0,150,1098,3376,
#Deleted in new
chr5_KI270792v1_alt	5686	15815	chr5_KI270792v1_alt:5686-15815	3	-	5686	5686	789624	2	3444,38,	0,10091,
#Deleted in new
chr5_KI270792v1_alt	23545	25130	chr5_KI270792v1_alt:23545-25130	3	+	23545	23545	8553170	1	1585,	0,
#Deleted in new
chr5_KI270792v1_alt	27335	57450	chr5_KI270792v1_alt:27335-57450	3	+	27564	56880	789624	10	254,36,80,61,128,96,148,85,128,1139,	0,350,652,23323,24543,25406,25927,26560,27428,28976,
#Deleted in new
chr5_KI270792v1_alt	27468	57189	chr5_KI270792v1_alt:27468-57189	1	+	27564	56175	789624	11	121,36,80,61,128,96,148,85,128,179,878,	0,217,519,23190,24410,25273,25794,26427,27295,28558,28843,
#Deleted in new
chr5_KI270792v1_alt	52642	54679	chr5_KI270792v1_alt:52642-54679	0	+	52642	52642	8553170	4	195,148,85,63,	0,620,1253,1974,
#Deleted in new
chr5_KI270792v1_alt	53262	56822	chr5_KI270792v1_alt:53262-56822	0	+	53262	53262	8553170	4	148,85,128,511,	0,633,1501,3049,
#Deleted in new
chr5_KI270792v1_alt	54311	56791	chr5_KI270792v1_alt:54311-56791	0	+	54311	54311	8553170	2	580,480,	0,2000,
#Deleted in new
chr5_KI270792v1_alt	68884	129717	chr5_KI270792v1_alt:68884-129717	3	-	70868	129673	789624	24	2076,134,179,108,132,170,196,169,105,120,99,119,175,58,99,168,212,242,131,55,147,123,95,168,	0,2973,7095,9976,13076,13315,14537,22575,23509,24313,25080,25636,26777,27645,28342,30407,32576,34063,35700,37103,37779,42330,42951,60665,
#Deleted in new
chr5_KI270792v1_alt	75719	81999	chr5_KI270792v1_alt:75719-81999	0	-	75719	75719	8553170	3	439,108,39,	0,3141,6241,
#Deleted in new
chr5_KI270792v1_alt	76036	92537	chr5_KI270792v1_alt:76036-92537	0	-	76036	92537	789624	7	122,108,132,170,196,169,144,	0,2824,5924,6163,7385,15423,16357,
#Deleted in new
chr5_KI270792v1_alt	92392	94609	chr5_KI270792v1_alt:92392-94609	0	-	92392	92392	8553170	4	106,120,346,89,	0,805,1325,2128,
#Deleted in new
chr5_KI270792v1_alt	96347	99373	chr5_KI270792v1_alt:96347-99373	0	-	96347	96347	8553170	3	240,99,82,	0,879,2944,
#Deleted in new
chr5_KI270793v1_alt	2317	14551	chr5_KI270793v1_alt:2317-14551	3	-	2317	14535	789624	4	109,193,128,98,	0,4318,5462,12136,
#Deleted in new
chr5_KI270793v1_alt	14686	24277	chr5_KI270793v1_alt:14686-24277	3	+	14686	14686	789624	3	59,307,225,	0,457,9366,
#Deleted in new
chr5_KI270793v1_alt	101976	103866	chr5_KI270793v1_alt:101976-103866	3	-	101976	101976	8553170	2	183,259,	0,1631,
#Deleted in new
chr5_KI270793v1_alt	104238	104459	chr5_KI270793v1_alt:104238-104459	3	+	104248	104459	789624	1	221,	0,
#Deleted in new
chr5_KI270793v1_alt	104240	104459	chr5_KI270793v1_alt:104240-104459	0	+	104248	104459	789624	1	219,	0,
#Deleted in new
chr5_KI270794v1_alt	41478	41647	chr5_KI270794v1_alt:41478-41647	0	-	41478	41478	8553170	1	169,	0,
#Deleted in new
chr5_KI270794v1_alt	82187	92930	chr5_KI270794v1_alt:82187-92930	0	-	82187	82187	8553170	2	617,90,	0,10653,
#Deleted in new
chr5_KI270794v1_alt	82442	93514	chr5_KI270794v1_alt:82442-93514	3	-	82442	93178	789624	2	362,463,	0,10609,
#Deleted in new
chr5_KI270794v1_alt	82442	93263	chr5_KI270794v1_alt:82442-93263	0	-	82442	93178	789624	2	362,212,	0,10609,
#Deleted in new
chr5_KI270794v1_alt	89375	89482	chr5_KI270794v1_alt:89375-89482	3	-	89375	89375	8553170	1	107,	0,
#Deleted in new
chr5_KI270794v1_alt	137707	139559	chr5_KI270794v1_alt:137707-139559	3	+	138062	139472	789624	1	1852,	0,
#Deleted in new
chr5_KI270794v1_alt	145937	155826	chr5_KI270794v1_alt:145937-155826	0	-	145969	155826	789624	4	257,212,124,144,	0,2547,6938,9745,
#Deleted in new
chr5_KI270794v1_alt	147187	155826	chr5_KI270794v1_alt:147187-155826	3	-	148469	155826	789624	3	1509,124,144,	0,5688,8495,
#Deleted in new
chr5_KI270794v1_alt	148589	155826	chr5_KI270794v1_alt:148589-155826	0	-	148589	155826	789624	3	107,124,144,	0,4286,7093,
#Deleted in new
chr5_KI270794v1_alt	152726	155826	chr5_KI270794v1_alt:152726-155826	0	-	152973	155826	789624	2	273,144,	0,2956,
#Deleted in new
chr5_KI270795v1_alt	5388	5719	chr5_KI270795v1_alt:5388-5719	0	-	5388	5388	8553170	1	331,	0,
#Deleted in new
chr5_KI270795v1_alt	5388	5726	chr5_KI270795v1_alt:5388-5726	1	-	5388	5388	8553170	1	338,	0,
#Deleted in new
chr5_KI270795v1_alt	5388	5730	chr5_KI270795v1_alt:5388-5730	3	-	5388	5388	8553170	2	48,58,	0,284,
#Deleted in new
chr5_KI270795v1_alt	10057	18808	chr5_KI270795v1_alt:10057-18808	5	+	10057	10057	16724991	6	339,157,205,162,101,606,	0,1010,3122,6847,7130,8145,
#Deleted in new
chr5_KI270795v1_alt	10130	18367	chr5_KI270795v1_alt:10130-18367	5	+	10130	10130	16724991	6	266,157,205,162,101,165,	0,937,3049,6774,7057,8072,
#Deleted in new
chr5_KI270795v1_alt	10790	17041	chr5_KI270795v1_alt:10790-17041	4	+	10790	10790	16724991	4	74,157,205,137,	0,277,2389,6114,
#Deleted in new
chr5_KI270795v1_alt	10790	89810	chr5_KI270795v1_alt:10790-89810	7	+	10790	10790	16724991	6	74,157,205,162,101,424,	0,277,2389,6114,6397,78596,
#Deleted in new
chr5_KI270795v1_alt	11067	16919	chr5_KI270795v1_alt:11067-16919	4	+	11067	11067	16724991	3	157,205,15,	0,2112,5837,
#Deleted in new
chr5_KI270795v1_alt	11067	17052	chr5_KI270795v1_alt:11067-17052	4	+	11067	11067	16724991	3	157,205,148,	0,2112,5837,
#Deleted in new
chr5_KI270795v1_alt	13066	17197	chr5_KI270795v1_alt:13066-17197	4	+	13066	13066	16724991	3	318,162,10,	0,3838,4121,
#Deleted in new
chr5_KI270795v1_alt	13325	18237	chr5_KI270795v1_alt:13325-18237	4	+	13325	13325	16724991	4	59,162,222,35,	0,3579,3862,4877,
#Deleted in new
chr5_KI270795v1_alt	16904	18452	chr5_KI270795v1_alt:16904-18452	4	+	16904	16904	16724991	3	162,101,250,	0,283,1298,
#Deleted in new
chr5_KI270795v1_alt	16926	17536	chr5_KI270795v1_alt:16926-17536	4	+	16926	16926	16724991	2	140,349,	0,261,
#Deleted in new
chr5_KI270795v1_alt	16978	60511	chr5_KI270795v1_alt:16978-60511	4	+	16978	16978	16724991	3	88,101,326,	0,209,43207,
#Deleted in new
chr5_KI270795v1_alt	17221	51805	chr5_KI270795v1_alt:17221-51805	4	+	17221	17221	16724991	2	67,183,	0,34401,
#Deleted in new
chr5_KI270795v1_alt	19795	71407	chr5_KI270795v1_alt:19795-71407	4	+	19795	19795	16724991	2	87,481,	0,51131,
#Deleted in new
chr5_KI270795v1_alt	78693	121635	chr5_KI270795v1_alt:78693-121635	3	+	78693	78693	8553170	2	145,402,	0,42540,
#Deleted in new
chr5_KI270795v1_alt	89412	96911	chr5_KI270795v1_alt:89412-96911	1	+	89412	89412	8553170	3	231,240,139,	0,1405,7360,
#Deleted in new
chr5_KI270795v1_alt	90490	101570	chr5_KI270795v1_alt:90490-101570	3	+	90490	90490	8553170	4	106,240,68,134,	0,327,6282,10946,
#Deleted in new
chr5_KI270795v1_alt	91048	99310	chr5_KI270795v1_alt:91048-99310	1	+	91048	91048	8553170	3	9,68,431,	0,5724,7831,
#Deleted in new
chr5_KI270795v1_alt	92328	96920	chr5_KI270795v1_alt:92328-96920	0	+	92328	92328	8553170	2	128,148,	0,4444,
#Deleted in new
chr5_KI270795v1_alt	104613	105067	chr5_KI270795v1_alt:104613-105067	3	+	104613	104613	8553170	1	454,	0,
#Deleted in new
chr5_KI270795v1_alt	108928	109894	chr5_KI270795v1_alt:108928-109894	7	+	108928	108928	16724991	1	966,	0,
#Deleted in new
chr5_KI270795v1_alt	130717	131530	chr5_KI270795v1_alt:130717-131530	3	-	131191	131530	789624	1	813,	0,
#Deleted in new
chr5_KI270796v1_alt	45884	88269	chr5_KI270796v1_alt:45884-88269	3	+	45884	45884	8553170	2	98,135,	0,42250,
#Deleted in new
chr5_KI270796v1_alt	71402	71666	chr5_KI270796v1_alt:71402-71666	3	-	71402	71402	8553170	1	264,	0,
#Deleted in new
chr5_KI270796v1_alt	97362	97974	chr5_KI270796v1_alt:97362-97974	3	-	97362	97362	8553170	1	612,	0,
#Deleted in new
chr5_KI270897v1_alt	114942	120867	chr5_KI270897v1_alt:114942-120867	7	+	114942	114942	16724991	4	188,85,85,231,	0,1148,3771,5694,
#Deleted in new
chr5_KI270897v1_alt	135377	145871	chr5_KI270897v1_alt:135377-145871	7	+	135377	135377	16724991	5	188,51,85,175,136,	0,1201,3788,5711,10358,
#Deleted in new
chr5_KI270897v1_alt	210203	210505	chr5_KI270897v1_alt:210203-210505	7	-	210203	210203	16724991	1	302,	0,
#Deleted in new
chr5_KI270897v1_alt	250578	258036	chr5_KI270897v1_alt:250578-258036	1	+	250783	257727	789624	3	212,109,382,	0,1160,7076,
#Deleted in new
chr5_KI270897v1_alt	250582	251835	chr5_KI270897v1_alt:250582-251835	0	+	251773	251835	789624	2	208,120,	0,1133,
#Deleted in new
chr5_KI270897v1_alt	250600	268460	chr5_KI270897v1_alt:250600-268460	3	+	250783	267087	789624	3	190,109,1590,	0,1138,16270,
#Deleted in new
chr5_KI270897v1_alt	250677	268450	chr5_KI270897v1_alt:250677-268450	1	+	250783	267109	789624	4	113,109,108,1363,	0,1061,16193,16410,
#Deleted in new
chr5_KI270897v1_alt	250687	255457	chr5_KI270897v1_alt:250687-255457	1	+	250783	255212	789624	3	103,109,357,	0,1051,4413,
#Deleted in new
chr5_KI270897v1_alt	250891	258036	chr5_KI270897v1_alt:250891-258036	1	+	251773	257727	789624	3	172,109,382,	0,847,6763,
#Deleted in new
chr5_KI270897v1_alt	250894	267064	chr5_KI270897v1_alt:250894-267064	0	+	251773	267064	789624	4	169,60,109,194,	0,431,844,15976,
#Deleted in new
chr5_KI270897v1_alt	250907	267451	chr5_KI270897v1_alt:250907-267451	1	+	251773	267087	789624	3	156,109,581,	0,831,15963,
#Deleted in new
chr5_KI270897v1_alt	251595	258034	chr5_KI270897v1_alt:251595-258034	0	+	251595	251595	8553170	2	252,380,	0,6059,
#Deleted in new
chr5_KI270897v1_alt	274950	302270	chr5_KI270897v1_alt:274950-302270	1	+	275024	301912	0	7	155,72,120,201,153,111,409,	0,13807,16357,17326,17686,21032,26911,
#Deleted in new
chr5_KI270897v1_alt	274950	302936	chr5_KI270897v1_alt:274950-302936	3	+	275024	301912	0	9	155,72,120,201,153,96,111,54,577,	0,13807,16357,17326,17686,19626,21032,26911,27409,
#Deleted in new
chr5_KI270897v1_alt	274976	302047	chr5_KI270897v1_alt:274976-302047	1	+	275024	301912	789624	7	129,72,120,153,96,111,186,	0,13781,16331,17660,19600,21006,26885,
#Deleted in new
chr5_KI270897v1_alt	274995	302937	chr5_KI270897v1_alt:274995-302937	0	+	275024	296673	789624	9	110,72,120,201,153,96,111,109,578,	0,13762,16312,17281,17641,19581,20987,21627,27364,
#Deleted in new
chr5_KI270897v1_alt	275015	302932	chr5_KI270897v1_alt:275015-302932	1	+	275024	302374	0	8	90,72,120,201,153,96,111,573,	0,13742,16292,17261,17621,19561,20967,27344,
#Deleted in new
chr5_KI270897v1_alt	275024	296673	chr5_KI270897v1_alt:275024-296673	1	+	275024	296673	789624	8	81,72,120,201,153,96,111,51,	0,13733,16283,17252,17612,19552,20958,21598,
#Deleted in new
chr5_KI270897v1_alt	275024	301912	chr5_KI270897v1_alt:275024-301912	1	+	275024	301912	0	8	81,72,120,201,153,96,111,51,	0,13733,16283,17252,17612,19552,20958,26837,
#Deleted in new
chr5_KI270897v1_alt	281139	282752	chr5_KI270897v1_alt:281139-282752	3	-	281139	281139	8553170	1	1613,	0,
#Deleted in new
chr5_KI270897v1_alt	292390	296195	chr5_KI270897v1_alt:292390-296195	0	+	292390	292390	8553170	3	87,153,213,	0,246,3592,
#Deleted in new
chr5_KI270897v1_alt	292426	295996	chr5_KI270897v1_alt:292426-295996	0	+	292426	294403	789624	5	51,153,117,96,14,	0,210,1941,2150,3556,
#Deleted in new
chr5_KI270897v1_alt	292636	296191	chr5_KI270897v1_alt:292636-296191	0	+	292636	292636	8553170	3	153,96,209,	0,1940,3346,
#Deleted in new
chr5_KI270897v1_alt	296005	303848	chr5_KI270897v1_alt:296005-303848	0	+	296005	296005	8553170	4	88,54,142,746,	0,5856,6354,7097,
#Deleted in new
chr5_KI270897v1_alt	319986	353784	chr5_KI270897v1_alt:319986-353784	7	-	319986	319986	16724991	12	365,165,87,153,168,2112,58,82,100,120,52,82,	0,4028,6059,6805,9763,13671,16642,17690,28662,31656,32050,33716,
#Deleted in new
chr5_KI270897v1_alt	358029	358324	chr5_KI270897v1_alt:358029-358324	7	+	358029	358029	16724991	1	295,	0,
#Deleted in new
chr5_KI270897v1_alt	449072	456530	chr5_KI270897v1_alt:449072-456530	1	+	449277	456221	789624	3	212,109,382,	0,1160,7076,
#Deleted in new
chr5_KI270897v1_alt	449094	466963	chr5_KI270897v1_alt:449094-466963	3	+	449277	465590	789624	3	190,109,1590,	0,1138,16279,
#Deleted in new
chr5_KI270897v1_alt	449171	466244	chr5_KI270897v1_alt:449171-466244	1	+	449277	465612	789624	4	113,109,108,654,	0,1061,16202,16419,
#Deleted in new
chr5_KI270897v1_alt	449181	453951	chr5_KI270897v1_alt:449181-453951	1	+	449277	453706	789624	3	103,109,357,	0,1051,4413,
#Deleted in new
chr5_KI270897v1_alt	449277	466473	chr5_KI270897v1_alt:449277-466473	1	+	449277	465590	789624	4	7,109,382,93,	0,955,16096,17103,
#Deleted in new
chr5_KI270897v1_alt	449355	465954	chr5_KI270897v1_alt:449355-465954	1	+	450267	465590	789624	3	202,109,581,	0,877,16018,
#Deleted in new
chr5_KI270897v1_alt	449385	456530	chr5_KI270897v1_alt:449385-456530	1	+	450267	456221	789624	3	172,109,382,	0,847,6763,
#Deleted in new
chr5_KI270897v1_alt	449388	465567	chr5_KI270897v1_alt:449388-465567	0	+	450267	465567	789624	4	169,60,109,194,	0,431,844,15985,
#Deleted in new
chr5_KI270897v1_alt	450089	456528	chr5_KI270897v1_alt:450089-456528	1	+	450267	456221	789624	2	252,380,	0,6059,
#Deleted in new
chr5_KI270897v1_alt	473490	500558	chr5_KI270897v1_alt:473490-500558	1	+	473538	500423	789624	7	129,72,120,153,96,111,186,	0,13781,16331,17660,19600,21008,26882,
#Deleted in new
chr5_KI270897v1_alt	473491	501447	chr5_KI270897v1_alt:473491-501447	1	+	473538	500423	0	9	128,72,120,201,153,96,111,54,577,	0,13780,16330,17299,17659,19599,21007,26881,27379,
#Deleted in new
chr5_KI270897v1_alt	473506	501444	chr5_KI270897v1_alt:473506-501444	1	+	473538	500885	0	8	113,72,120,201,153,96,111,574,	0,13765,16315,17284,17644,19584,20992,27364,
#Deleted in new
chr5_KI270897v1_alt	473538	495189	chr5_KI270897v1_alt:473538-495189	1	+	473538	495189	789624	8	81,72,120,201,153,96,111,51,	0,13733,16283,17252,17612,19552,20960,21600,
#Deleted in new
chr5_KI270897v1_alt	473538	500438	chr5_KI270897v1_alt:473538-500438	1	+	473538	500423	0	7	81,72,120,201,153,111,66,	0,13733,16283,17252,17612,20960,26834,
#Deleted in new
chr5_KI270897v1_alt	473538	500438	chr5_KI270897v1_alt:473538-500438	3	+	473538	500423	0	8	81,72,120,201,153,96,111,66,	0,13733,16283,17252,17612,19552,20960,26834,
#Deleted in new
chr5_KI270897v1_alt	479653	481266	chr5_KI270897v1_alt:479653-481266	3	-	479653	479653	8553170	1	1613,	0,
#Deleted in new
chr5_KI270897v1_alt	489916	501226	chr5_KI270897v1_alt:489916-501226	0	+	489916	500885	789624	5	25,201,96,111,356,	0,874,3174,4582,10954,
#Deleted in new
chr5_KI270897v1_alt	489916	501004	chr5_KI270897v1_alt:489916-501004	0	+	489916	500423	789624	6	25,201,153,111,54,134,	0,874,1234,4582,10456,10954,
#Deleted in new
chr5_KI270897v1_alt	489916	501004	chr5_KI270897v1_alt:489916-501004	0	+	489916	500423	789624	5	25,201,153,54,134,	0,874,1234,10456,10954,
#Deleted in new
chr5_KI270897v1_alt	490940	493192	chr5_KI270897v1_alt:490940-493192	0	+	490940	492917	789624	4	51,153,117,102,	0,210,1941,2150,
#Deleted in new
chr5_KI270897v1_alt	516877	569290	chr5_KI270897v1_alt:516877-569290	1	-	518498	561297	789624	15	1986,165,87,153,168,2112,58,82,100,120,52,82,100,571,251,	0,5649,7680,8426,11384,15292,18262,19310,30247,33222,33616,35279,42779,43852,52162,
#Deleted in new
chr5_KI270897v1_alt	516877	573067	chr5_KI270897v1_alt:516877-573067	1	-	518498	561297	789624	17	1986,165,87,153,168,2112,58,82,100,120,52,82,100,571,126,89,73,	0,5649,7680,8426,11384,15292,18262,19310,30247,33222,33616,35279,42779,43852,52162,55820,56117,
#Deleted in new
chr5_KI270897v1_alt	516877	535545	chr5_KI270897v1_alt:516877-535545	0	-	516877	516877	8553170	6	1986,165,87,153,168,3376,	0,5649,7680,8426,11384,15292,
#Deleted in new
chr5_KI270897v1_alt	518444	569091	chr5_KI270897v1_alt:518444-569091	1	-	518498	561297	789624	14	419,165,87,153,2112,58,82,100,120,52,82,100,571,52,	0,4082,6113,6859,13725,16695,17743,28680,31655,32049,33712,41212,42285,50595,
#Deleted in new
chr5_KI270897v1_alt	518498	572753	chr5_KI270897v1_alt:518498-572753	1	-	518498	572753	789624	14	365,165,87,153,168,2112,58,82,100,120,52,82,126,56,	0,4028,6059,6805,9763,13671,16641,17689,28626,31601,31995,33658,50541,54199,
#Deleted in new
chr5_KI270897v1_alt	518744	573494	chr5_KI270897v1_alt:518744-573494	2	-	518744	572753	789624	15	119,165,87,153,168,2112,58,82,100,120,52,82,126,89,500,	0,3782,5813,6559,9517,13425,16395,17443,28380,31355,31749,33412,50295,53953,54250,
#Deleted in new
chr5_KI270897v1_alt	546522	569155	chr5_KI270897v1_alt:546522-569155	0	-	546522	546522	8553170	5	702,120,52,82,116,	0,3577,3971,5634,22517,
#Deleted in new
chr5_KI270897v1_alt	551978	569111	chr5_KI270897v1_alt:551978-569111	0	-	560139	561297	789624	5	260,100,75,571,72,	0,7678,8115,8751,17061,
#Deleted in new
chr5_KI270897v1_alt	581051	615980	chr5_KI270897v1_alt:581051-615980	3	-	584062	611141	0	16	3131,40,103,104,64,108,88,91,106,55,51,87,37,78,89,108,	0,4842,8852,9511,12771,15334,16090,16396,22679,27016,27446,28170,28598,29014,30034,34821,
#Deleted in new
chr5_KI270897v1_alt	581549	582786	chr5_KI270897v1_alt:581549-582786	0	-	581549	581549	8553170	2	478,231,	0,1006,
#Deleted in new
chr5_KI270897v1_alt	583404	615980	chr5_KI270897v1_alt:583404-615980	0	-	609286	611141	789624	15	778,40,103,104,64,108,88,91,106,55,51,87,78,89,108,	0,2489,6499,7158,10418,12981,13737,14043,20326,24663,25093,25817,26661,27681,32468,
#Deleted in new
chr5_KI270897v1_alt	583461	616029	chr5_KI270897v1_alt:583461-616029	1	-	584062	611141	0	17	721,40,103,104,64,108,88,91,106,55,51,87,37,78,89,98,157,	0,2432,6442,7101,10361,12924,13680,13986,20269,24606,25036,25760,26188,26604,27624,30041,32411,
#Deleted in new
chr5_KI270897v1_alt	583714	610143	chr5_KI270897v1_alt:583714-610143	0	-	598642	610143	789624	15	468,40,103,104,64,108,88,91,89,106,55,51,87,37,78,	0,2179,6189,6848,10108,12671,13427,13733,14882,20016,24353,24783,25507,25935,26351,
#Deleted in new
chr5_KI270897v1_alt	583967	616031	chr5_KI270897v1_alt:583967-616031	1	-	584062	611141	789624	8	103,55,51,87,37,78,89,159,	0,24100,24530,25254,25682,26098,27118,31905,
#Deleted in new
chr5_KI270897v1_alt	595835	611177	chr5_KI270897v1_alt:595835-611177	0	-	595835	595835	8553170	9	1394,91,106,55,51,87,37,78,92,	0,1612,7895,12232,12662,13386,13814,14230,15250,
#Deleted in new
chr5_KI270897v1_alt	596468	616053	chr5_KI270897v1_alt:596468-616053	0	-	596468	596468	8553170	10	25,397,106,55,51,87,37,78,89,181,	0,673,7262,11599,12029,12753,13181,13597,14617,19404,
#Deleted in new
chr5_KI270897v1_alt	603408	616068	chr5_KI270897v1_alt:603408-616068	0	-	603408	603408	8553170	8	428,55,51,87,37,78,89,35,	0,4659,5089,5813,6241,6657,7677,12625,
#Deleted in new
chr5_KI270897v1_alt	606253	611177	chr5_KI270897v1_alt:606253-611177	0	-	606253	606253	8553170	6	1511,55,51,87,78,92,	0,1814,2244,2968,3812,4832,
#Deleted in new
chr5_KI270897v1_alt	608884	616055	chr5_KI270897v1_alt:608884-616055	0	-	608884	608884	8553170	5	424,37,78,89,183,	0,765,1181,2201,6988,
#Deleted in new
chr5_KI270897v1_alt	609787	611141	chr5_KI270897v1_alt:609787-611141	0	-	609787	609787	8553170	2	356,56,	0,1298,
#Deleted in new
chr5_KI270897v1_alt	610128	616027	chr5_KI270897v1_alt:610128-616027	0	-	610128	611141	789624	3	15,89,353,	0,957,5546,
#Deleted in new
chr5_KI270897v1_alt	611129	616017	chr5_KI270897v1_alt:611129-616017	0	-	611129	611129	8553170	3	45,98,343,	0,2373,4545,
#Deleted in new
chr5_KI270897v1_alt	630401	654425	chr5_KI270897v1_alt:630401-654425	7	-	630401	630401	16724991	8	192,2110,58,82,100,120,52,93,	0,3942,6910,7958,18893,21862,22256,23931,
#Deleted in new
chr5_KI270897v1_alt	652964	760797	chr5_KI270897v1_alt:652964-760797	3	-	652964	652964	8553170	12	1450,174,594,115,105,163,93,136,175,85,188,2486,	0,3118,12137,15341,66568,66761,69945,70322,95362,97375,101045,105347,
#Deleted in new
chr5_KI270897v1_alt	723286	733767	chr5_KI270897v1_alt:723286-733767	7	-	723286	723286	16724991	5	136,175,85,85,188,	0,4610,6623,9244,10293,
#Deleted in new
chr5_KI270897v1_alt	748317	754197	chr5_KI270897v1_alt:748317-754197	7	-	748317	748317	16724991	4	184,85,85,188,	0,2022,4643,5692,
#Deleted in new
chr5_KI270897v1_alt	881834	976339	chr5_KI270897v1_alt:881834-976339	3	-	881834	881834	789624	2	2068,698,	0,93807,
#Deleted in new
chr5_KI270897v1_alt	883466	976333	chr5_KI270897v1_alt:883466-976333	1	-	883466	883466	8553170	3	436,141,387,	0,92175,92480,
#Deleted in new
chr5_KI270897v1_alt	902653	904876	chr5_KI270897v1_alt:902653-904876	3	-	902653	902653	8553170	3	354,87,60,	0,1920,2163,
#Deleted in new
chr5_KI270897v1_alt	905763	915972	chr5_KI270897v1_alt:905763-915972	7	+	905763	905763	16724991	4	231,1293,138,178,	0,501,9511,10031,
#Deleted in new
chr5_KI270897v1_alt	905763	915773	chr5_KI270897v1_alt:905763-915773	5	+	905763	905763	16724991	4	231,1293,138,254,	0,501,9511,9756,
#Deleted in new
chr5_KI270897v1_alt	905807	906314	chr5_KI270897v1_alt:905807-906314	5	+	905807	905807	16724991	2	187,50,	0,457,
#Deleted in new
chr5_KI270897v1_alt	907480	909210	chr5_KI270897v1_alt:907480-909210	4	+	907480	907480	16724991	2	77,759,	0,971,
#Deleted in new
chr5_KI270897v1_alt	975612	976566	chr5_KI270897v1_alt:975612-976566	3	+	975612	975612	8553170	2	57,510,	0,444,
#Deleted in new
chr5_KI270897v1_alt	985598	1097795	chr5_KI270897v1_alt:985598-1097795	3	+	985861	1094860	789624	39	475,277,110,60,126,134,95,55,144,279,148,159,157,92,193,131,1687,188,223,179,211,131,202,194,385,120,37,93,229,161,151,181,64,187,205,40,256,247,3067,	0,2964,6203,8443,10481,11739,14782,28213,30855,33775,35357,39623,41649,45938,46975,48997,53841,56617,57561,59320,60437,61698,66665,67132,68315,76684,83418,83933,85830,86481,88733,89415,93058,93796,97492,101262,104358,106650,109130,
#Deleted in new
chr5_KI270897v1_alt	985642	1039710	chr5_KI270897v1_alt:985642-1039710	1	+	985861	1039609	789624	18	431,277,110,60,126,134,95,55,144,279,148,159,157,92,193,131,139,131,	0,2920,6159,8399,10437,11695,14738,28169,30811,33731,35313,39579,41605,45894,46931,48953,53797,53937,
#Deleted in new
chr5_KI270897v1_alt	985669	1075452	chr5_KI270897v1_alt:985669-1075452	0	+	985669	985669	8553170	32	404,277,110,60,126,134,95,55,144,279,148,159,157,92,193,131,1687,188,223,179,211,131,202,194,385,120,37,93,229,161,151,439,	0,2893,6132,8372,10410,11668,14711,28142,30784,33704,35286,39552,41578,45867,46904,48926,53770,56546,57490,59249,60366,61627,66594,67061,68244,76613,83347,83862,85759,86410,88662,89344,
#Deleted in new
chr5_KI270897v1_alt	1024436	1041325	chr5_KI270897v1_alt:1024436-1041325	0	+	1024436	1024436	8553170	6	944,157,92,193,131,1886,	0,2811,7100,8137,10159,15003,
#Deleted in new
chr5_KI270897v1_alt	1052767	1097795	chr5_KI270897v1_alt:1052767-1097795	0	+	1052767	1083266	789624	16	157,385,120,37,93,226,161,151,181,64,205,40,256,247,121,3067,	0,1146,9515,16249,16764,18664,19312,21564,22246,25889,30323,34093,37189,39481,39982,41961,
#Deleted in new
chr5_KI270897v1_alt	1062348	1097795	chr5_KI270897v1_alt:1062348-1097795	0	+	1062348	1092761	789624	14	54,37,226,161,151,181,64,187,205,40,256,247,121,3067,	0,6668,9083,9731,11983,12665,16308,17046,20742,24512,27608,29900,30401,32380,
#Deleted in new
chr5_KI270897v1_alt	1117262	1134443	chr5_KI270897v1_alt:1117262-1134443	3	+	1117400	1134443	789624	6	267,67,85,102,128,113,	0,5638,8992,12371,15218,17068,
#Deleted in new
chr5_KI270897v1_alt	1117280	1134443	chr5_KI270897v1_alt:1117280-1134443	0	+	1117400	1134443	789624	6	249,67,85,102,128,113,	0,5620,8974,12353,15200,17050,
#Deleted in new
chr5_KI270897v1_alt	1117304	1134443	chr5_KI270897v1_alt:1117304-1134443	0	+	1117400	1134443	789624	6	225,67,85,102,128,113,	0,5596,8950,12329,15176,17026,
#Deleted in new
chr5_KI270897v1_alt	1122845	1133040	chr5_KI270897v1_alt:1122845-1133040	0	+	1122845	1122845	8553170	4	122,85,102,560,	0,3409,6788,9635,
#Deleted in new
chr5_KI270897v1_alt	1126244	1134443	chr5_KI270897v1_alt:1126244-1134443	0	+	1126244	1126244	8553170	4	95,102,128,113,	0,3389,6236,8086,
#Deleted in new
chr5_KI270897v1_alt	1132483	1134443	chr5_KI270897v1_alt:1132483-1134443	0	+	1132483	1132483	8553170	2	125,113,	0,1847,
#Deleted in new
chr5_KI270897v1_alt	1134354	1134443	chr5_KI270897v1_alt:1134354-1134443	0	+	1134354	1134354	8553170	1	89,	0,
#Deleted in new
chr5_KI270898v1_alt	5388	5726	chr5_KI270898v1_alt:5388-5726	1	-	5388	5388	8553170	1	338,	0,
#Deleted in new
chr5_KI270898v1_alt	5388	5719	chr5_KI270898v1_alt:5388-5719	0	-	5388	5388	8553170	1	331,	0,
#Deleted in new
chr5_KI270898v1_alt	5388	5730	chr5_KI270898v1_alt:5388-5730	3	-	5388	5388	8553170	2	48,58,	0,284,
#Deleted in new
chr5_KI270898v1_alt	10057	18808	chr5_KI270898v1_alt:10057-18808	5	+	10057	10057	16724991	6	339,157,205,162,101,606,	0,1010,3122,6847,7130,8145,
#Deleted in new
chr5_KI270898v1_alt	10130	18367	chr5_KI270898v1_alt:10130-18367	5	+	10130	10130	16724991	6	266,157,205,162,101,165,	0,937,3049,6774,7057,8072,
#Deleted in new
chr5_KI270898v1_alt	10790	85268	chr5_KI270898v1_alt:10790-85268	7	+	10790	10790	16724991	6	74,157,205,162,101,424,	0,277,2389,6114,6397,74054,
#Deleted in new
chr5_KI270898v1_alt	10790	17041	chr5_KI270898v1_alt:10790-17041	4	+	10790	10790	16724991	4	74,157,205,137,	0,277,2389,6114,
#Deleted in new
chr5_KI270898v1_alt	11067	17052	chr5_KI270898v1_alt:11067-17052	4	+	11067	11067	16724991	3	157,205,148,	0,2112,5837,
#Deleted in new
chr5_KI270898v1_alt	11067	16919	chr5_KI270898v1_alt:11067-16919	4	+	11067	11067	16724991	3	157,205,15,	0,2112,5837,
#Deleted in new
chr5_KI270898v1_alt	13066	17197	chr5_KI270898v1_alt:13066-17197	4	+	13066	13066	16724991	3	318,162,10,	0,3838,4121,
#Deleted in new
chr5_KI270898v1_alt	13325	18237	chr5_KI270898v1_alt:13325-18237	4	+	13325	13325	16724991	4	59,162,222,35,	0,3579,3862,4877,
#Deleted in new
chr5_KI270898v1_alt	16904	18452	chr5_KI270898v1_alt:16904-18452	4	+	16904	16904	16724991	3	162,101,250,	0,283,1298,
#Deleted in new
chr5_KI270898v1_alt	16926	17536	chr5_KI270898v1_alt:16926-17536	4	+	16926	16926	16724991	2	140,349,	0,261,
#Deleted in new
chr5_KI270898v1_alt	16978	55923	chr5_KI270898v1_alt:16978-55923	4	+	16978	16978	16724991	3	88,101,326,	0,209,38619,
#Deleted in new
chr5_KI270898v1_alt	17221	51803	chr5_KI270898v1_alt:17221-51803	4	+	17221	17221	16724991	2	67,183,	0,34399,
#Deleted in new
chr5_KI270898v1_alt	19795	66813	chr5_KI270898v1_alt:19795-66813	4	+	19795	19795	16724991	2	87,481,	0,46537,
#Deleted in new
chr5_KI270898v1_alt	74157	117870	chr5_KI270898v1_alt:74157-117870	3	+	74157	74157	8553170	2	145,402,	0,43311,
#Deleted in new
chr5_KI270898v1_alt	84870	92286	chr5_KI270898v1_alt:84870-92286	3	+	84870	84870	8553170	3	231,240,142,	0,1382,7274,
#Deleted in new
chr5_KI270898v1_alt	85948	98496	chr5_KI270898v1_alt:85948-98496	1	+	85948	85948	8553170	4	106,240,71,134,	0,304,6196,12414,
#Deleted in new
chr5_KI270898v1_alt	86483	94685	chr5_KI270898v1_alt:86483-94685	1	+	86483	86483	8553170	3	9,71,431,	0,5661,7771,
#Deleted in new
chr5_KI270898v1_alt	87700	92295	chr5_KI270898v1_alt:87700-92295	0	+	87700	87700	8553170	2	128,151,	0,4444,
#Deleted in new
chr5_KI270898v1_alt	101539	101993	chr5_KI270898v1_alt:101539-101993	3	+	101539	101539	8553170	1	454,	0,
#Deleted in new
chr5_KI270898v1_alt	105848	106815	chr5_KI270898v1_alt:105848-106815	7	+	105848	105848	16724991	1	967,	0,
#Deleted in new
chr5_KI270898v1_alt	127080	130957	chr5_KI270898v1_alt:127080-130957	3	-	127554	130779	789624	3	813,233,287,	0,1872,3590,
#Deleted in new
chr5_KN196477v1_alt	98373	98514	chr5_KN196477v1_alt:98373-98514	7	+	98373	98373	16724991	1	141,	0,
#Deleted in new
chr5_KV575243v1_alt	40657	46457	chr5_KV575243v1_alt:40657-46457	1	+	40657	46457	789624	3	186,85,98,	0,3787,5702,
#Deleted in new
chr5_KV575243v1_alt	40657	46457	chr5_KV575243v1_alt:40657-46457	3	+	40657	46457	789624	3	186,85,98,	0,3787,5702,
#Deleted in new
chr5_KV575243v1_alt	60938	66737	chr5_KV575243v1_alt:60938-66737	1	+	60938	66737	789624	3	186,85,98,	0,3786,5701,
#Deleted in new
chr5_KV575243v1_alt	60938	66737	chr5_KV575243v1_alt:60938-66737	3	+	60938	66737	789624	3	186,85,98,	0,3786,5701,
#Deleted in new
chr5_KV575243v1_alt	63051	64212	chr5_KV575243v1_alt:63051-64212	3	+	63051	63051	8553170	1	1161,	0,
#Deleted in new
chr5_KV575243v1_alt	80415	86218	chr5_KV575243v1_alt:80415-86218	1	+	80415	86218	789624	3	186,85,98,	0,3791,5705,
#Deleted in new
chr5_KV575243v1_alt	80415	86218	chr5_KV575243v1_alt:80415-86218	3	+	80415	86218	789624	3	186,85,98,	0,3791,5705,
#Deleted in new
chr5_KV575243v1_alt	100702	106503	chr5_KV575243v1_alt:100702-106503	1	+	100702	106503	789624	3	186,85,98,	0,3789,5703,
#Deleted in new
chr5_KV575243v1_alt	100702	106503	chr5_KV575243v1_alt:100702-106503	3	+	100702	106503	789624	3	186,85,98,	0,3789,5703,
#Deleted in new
chr5_KV575243v1_alt	110889	112980	chr5_KV575243v1_alt:110889-112980	1	-	110889	112980	789624	4	34,68,969,189,	0,859,931,1902,
#Deleted in new
chr5_KV575243v1_alt	110889	112980	chr5_KV575243v1_alt:110889-112980	3	-	110889	112980	789624	4	34,68,969,189,	0,859,931,1902,
#Deleted in new
chr5_KV575243v1_alt	120177	125986	chr5_KV575243v1_alt:120177-125986	1	+	120177	125986	789624	3	186,85,98,	0,3795,5711,
#Deleted in new
chr5_KV575243v1_alt	120177	125986	chr5_KV575243v1_alt:120177-125986	3	+	120177	125986	789624	3	186,85,98,	0,3795,5711,
#Deleted in new
chr5_KV575243v1_alt	140480	146274	chr5_KV575243v1_alt:140480-146274	1	+	140480	146274	789624	3	186,85,98,	0,3783,5696,
#Deleted in new
chr5_KV575243v1_alt	140480	146274	chr5_KV575243v1_alt:140480-146274	3	+	140480	146274	789624	3	186,85,98,	0,3783,5696,
#Deleted in new
chr5_KV575243v1_alt	218894	219185	chr5_KV575243v1_alt:218894-219185	3	+	218894	218894	8553170	1	291,	0,
#Deleted in new
chr5_KV575244v1_fix	142211	143572	chr5_KV575244v1_fix:142211-143572	3	+	142211	142211	8553170	2	200,160,	0,1201,
#Deleted in new
chr5_KV575244v1_fix	142237	143468	chr5_KV575244v1_fix:142237-143468	3	-	142237	142237	8553170	2	398,226,	0,1005,
#Deleted in new
chr5_KV575244v1_fix	150525	150699	chr5_KV575244v1_fix:150525-150699	7	-	150525	150525	16724991	1	174,	0,
#Deleted in new
chr5_KV575244v1_fix	220000	220681	chr5_KV575244v1_fix:220000-220681	3	+	220000	220000	8553170	2	403,158,	0,523,
#Deleted in new
chr5_KV575244v1_fix	256721	256803	chr5_KV575244v1_fix:256721-256803	3	-	256721	256721	8553170	1	82,	0,
#Deleted in new
chr5_KV575244v1_fix	267960	280237	chr5_KV575244v1_fix:267960-280237	3	-	267960	267960	8553170	2	419,116,	0,12161,
#Deleted in new
chr5_KV575244v1_fix	286958	289575	chr5_KV575244v1_fix:286958-289575	7	+	286958	286958	16724991	4	248,58,61,775,	0,959,1562,1842,
#Deleted in new
chr5_KV575244v1_fix	291726	292016	chr5_KV575244v1_fix:291726-292016	7	-	291726	291726	16724991	1	290,	0,
#Deleted in new
chr5_KV575244v1_fix	315199	376287	chr5_KV575244v1_fix:315199-376287	1	+	315211	375780	0	18	322,174,118,102,124,62,66,70,102,117,168,98,120,130,95,49,78,651,	0,9465,11989,16904,18745,26518,30402,35243,38995,41074,42927,45940,47636,49766,52953,56937,58643,60437,
#Deleted in new
chr5_KV575244v1_fix	315477	368832	chr5_KV575244v1_fix:315477-368832	0	+	315477	354262	8553170	16	44,174,118,102,124,62,66,70,145,102,117,168,98,120,130,680,	0,9187,11711,16626,18467,26240,30124,34965,35500,38717,40796,42649,45662,47358,49488,52675,
#Deleted in new
chr5_KV575244v1_fix	315479	334025	chr5_KV575244v1_fix:315479-334025	0	+	315479	334025	8553170	6	42,141,174,118,102,81,	0,4811,9185,11709,16624,18465,
#Deleted in new
chr5_KV575244v1_fix	324331	376273	chr5_KV575244v1_fix:324331-376273	1	+	324678	375780	0	18	144,174,118,102,124,62,66,70,102,117,168,98,120,130,95,49,78,637,	0,333,2857,7772,9613,17386,21270,26111,29863,31942,33795,36808,38504,40634,43821,47805,49511,51305,
#Deleted in new
chr5_KV575244v1_fix	324331	376272	chr5_KV575244v1_fix:324331-376272	1	+	324678	375780	0	17	507,118,102,124,62,66,70,102,117,168,98,120,130,95,49,78,636,	0,2857,7772,9613,17386,21270,26111,29863,31942,33795,36808,38504,40634,43821,47805,49511,51305,
#Deleted in new
chr5_KV575244v1_fix	324331	327564	chr5_KV575244v1_fix:324331-327564	0	+	324331	324331	8553170	3	144,174,376,	0,333,2857,
#Deleted in new
chr5_KV575244v1_fix	324380	332205	chr5_KV575244v1_fix:324380-332205	2	+	324380	324380	8553170	2	458,102,	0,7723,
#Deleted in new
chr5_KV575244v1_fix	327272	361172	chr5_KV575244v1_fix:327272-361172	0	+	327272	361172	8553170	9	34,102,124,62,70,102,117,168,33,	0,4831,6672,14445,23170,26922,29001,30854,33867,
#Deleted in new
chr5_KV575244v1_fix	332152	355607	chr5_KV575244v1_fix:332152-355607	0	+	332152	332152	8553170	7	53,124,62,66,70,102,98,	0,1792,9565,13449,18290,22042,23357,
#Deleted in new
chr5_KV575244v1_fix	336798	337384	chr5_KV575244v1_fix:336798-337384	7	+	336798	336798	16724991	1	586,	0,
#Deleted in new
chr5_KV575244v1_fix	341755	373889	chr5_KV575244v1_fix:341755-373889	0	+	341755	373889	8553170	11	24,66,70,117,168,98,120,130,95,49,47,	0,3846,8687,14518,16371,19384,21080,23210,26397,30381,32087,
#Deleted in new
chr5_KV575244v1_fix	354011	358262	chr5_KV575244v1_fix:354011-358262	0	+	354011	354011	8553170	3	285,117,136,	0,2262,4115,
#Deleted in new
chr5_KV575244v1_fix	362177	370002	chr5_KV575244v1_fix:362177-370002	3	-	362177	362177	789624	9	690,140,103,122,151,26,203,396,135,	0,918,2349,3364,3581,4169,6147,6460,7690,
#Deleted in new
chr5_KV575244v1_fix	362833	372845	chr5_KV575244v1_fix:362833-372845	0	+	362833	362833	8553170	4	122,130,95,709,	0,2132,5319,9303,
#Deleted in new
chr5_KV575244v1_fix	373163	375733	chr5_KV575244v1_fix:373163-375733	0	+	373163	373163	8553170	2	757,97,	0,2473,
#Deleted in new
chr5_KV575244v1_fix	373526	376231	chr5_KV575244v1_fix:373526-376231	0	+	373526	373526	8553170	4	220,78,181,595,	0,316,1019,2110,
#Deleted in new
chr5_KV575244v1_fix	381117	389408	chr5_KV575244v1_fix:381117-389408	1	-	381117	389408	8553170	12	116,93,90,60,136,134,72,179,139,144,156,97,	0,1282,2025,2207,2670,2955,3145,3301,4426,6049,6399,8194,
#Deleted in new
chr5_KV575244v1_fix	381117	389408	chr5_KV575244v1_fix:381117-389408	1	-	381117	389408	8553170	12	116,93,90,60,136,134,72,179,139,144,156,97,	0,1282,2025,2207,2670,2955,3145,3301,4426,6049,6399,8194,
#Deleted in new
chr5_KV575244v1_fix	381822	389408	chr5_KV575244v1_fix:381822-389408	1	-	381822	389408	8553170	11	47,93,90,136,134,72,179,139,144,156,97,	0,577,1472,1965,2250,2440,2596,3721,5344,5694,7489,
#Deleted in new
chr5_KV575244v1_fix	381822	389408	chr5_KV575244v1_fix:381822-389408	3	-	381822	389408	789624	12	47,93,90,60,136,134,72,179,139,144,156,97,	0,577,1320,1502,1965,2250,2440,2596,3721,5344,5694,7489,
#Deleted in new
chr5_KV575244v1_fix	381822	389408	chr5_KV575244v1_fix:381822-389408	1	-	381822	389408	8553170	12	47,93,90,60,136,134,72,179,139,144,156,97,	0,577,1320,1502,1965,2250,2440,2596,3721,5344,5694,7489,
#Deleted in new
chr5_KV575244v1_fix	381822	389408	chr5_KV575244v1_fix:381822-389408	1	-	381822	389408	8553170	11	47,93,90,136,134,72,179,139,144,156,97,	0,577,1472,1965,2250,2440,2596,3721,5344,5694,7489,
#Deleted in new
chr5_KV575244v1_fix	384442	389408	chr5_KV575244v1_fix:384442-389408	1	-	384442	389408	8553170	4	155,144,156,97,	0,2724,3074,4869,
#Deleted in new
chr5_KV575244v1_fix	384442	389408	chr5_KV575244v1_fix:384442-389408	1	-	384442	389408	8553170	4	155,144,156,97,	0,2724,3074,4869,
#Deleted in new
chr5_KV575244v1_fix	395438	395698	chr5_KV575244v1_fix:395438-395698	3	+	395438	395438	8553170	1	260,	0,
#Deleted in new
chr5_KV575244v1_fix	406316	407490	chr5_KV575244v1_fix:406316-407490	7	-	406316	406316	16724991	3	164,342,69,	0,543,1105,
#Deleted in new
chr5_KV575244v1_fix	406483	407477	chr5_KV575244v1_fix:406483-407477	5	-	406483	406483	16724991	2	717,54,	0,940,
#Deleted in new
chr5_KV575244v1_fix	413742	416270	chr5_KV575244v1_fix:413742-416270	1	+	413742	416270	789624	4	222,58,61,718,	0,934,1530,1810,
#Deleted in new
chr5_KV575244v1_fix	413742	416270	chr5_KV575244v1_fix:413742-416270	3	+	413742	416270	8553170	4	222,58,61,718,	0,934,1530,1810,
#Deleted in new
chr5_KV575244v1_fix	444273	446666	chr5_KV575244v1_fix:444273-446666	3	-	444273	446610	789624	2	683,102,	0,2291,
#Deleted in new
chr5_KV575244v1_fix	444318	473926	chr5_KV575244v1_fix:444318-473926	0	+	471240	473926	8553170	5	150,174,74,59,128,	0,26919,27498,28372,29480,
#Deleted in new
chr5_KV575244v1_fix	444722	460209	chr5_KV575244v1_fix:444722-460209	7	+	444722	444722	16724991	2	253,344,	0,15143,
#Deleted in new
chr5_KV575244v1_fix	459756	460328	chr5_KV575244v1_fix:459756-460328	5	+	459756	459756	16724991	1	572,	0,
#Deleted in new
chr5_KV575244v1_fix	463959	473896	chr5_KV575244v1_fix:463959-473896	0	+	471240	473896	8553170	5	420,174,74,59,98,	0,7278,7857,8731,9839,
#Deleted in new
chr5_KV575244v1_fix	463970	494487	chr5_KV575244v1_fix:463970-494487	1	+	471240	494224	789624	15	187,174,74,59,142,82,193,190,114,157,216,120,127,80,317,	0,7267,7846,8720,9828,10567,11462,17714,21277,22013,24413,25269,26266,28289,30200,
#Deleted in new
chr5_KV575244v1_fix	464459	496505	chr5_KV575244v1_fix:464459-496505	1	+	471240	494224	789624	15	197,174,74,59,142,82,193,190,114,157,216,120,127,80,2335,	0,6778,7357,8231,9339,10078,10973,17225,20788,21524,23924,24780,25777,27800,29711,
#Deleted in new
chr5_KV575244v1_fix	464459	496505	chr5_KV575244v1_fix:464459-496505	1	+	471240	494224	789624	15	144,174,74,59,142,82,193,190,114,157,216,120,127,80,2335,	0,6778,7357,8231,9339,10078,10973,17225,20788,21524,23924,24780,25777,27800,29711,
#Deleted in new
chr5_KV575244v1_fix	464497	474596	chr5_KV575244v1_fix:464497-474596	0	+	471240	474596	8553170	6	62,174,74,59,142,59,	0,6740,7319,8193,9301,10040,
#Deleted in new
chr5_KV575244v1_fix	464509	471881	chr5_KV575244v1_fix:464509-471881	0	+	471240	471881	8553170	4	147,196,174,65,	0,619,6728,7307,
#Deleted in new
chr5_KV575244v1_fix	464521	474619	chr5_KV575244v1_fix:464521-474619	0	+	471240	473813	8553170	4	135,174,142,82,	0,6716,9277,10016,
#Deleted in new
chr5_KV575244v1_fix	464530	473816	chr5_KV575244v1_fix:464530-473816	0	+	471240	473816	8553170	6	126,276,174,74,59,18,	0,5183,6707,7286,8160,9268,
#Deleted in new
chr5_KV575244v1_fix	464530	486074	chr5_KV575244v1_fix:464530-486074	0	+	471240	486074	8553170	8	73,126,131,82,193,190,114,91,	0,6707,9279,10007,10902,17154,20717,21453,
#Deleted in new
chr5_KV575244v1_fix	464537	475622	chr5_KV575244v1_fix:464537-475622	0	+	473818	475622	8553170	5	119,59,142,82,190,	0,8153,9261,10000,10895,
#Deleted in new
chr5_KV575244v1_fix	464541	494262	chr5_KV575244v1_fix:464541-494262	2	+	471240	473844	8553170	14	115,174,74,142,82,193,190,114,157,216,120,127,80,92,	0,6696,7275,9257,9996,10891,17143,20706,21442,23842,24698,25695,27718,29629,
#Deleted in new
chr5_KV575244v1_fix	464579	475509	chr5_KV575244v1_fix:464579-475509	0	+	464579	475509	8553170	6	77,74,59,142,82,77,	0,7237,8111,9219,9958,10853,
#Deleted in new
chr5_KV575244v1_fix	465739	471336	chr5_KV575244v1_fix:465739-471336	0	+	471240	471336	8553170	3	348,122,99,	0,698,5498,
#Deleted in new
chr5_KV575244v1_fix	471865	481821	chr5_KV575244v1_fix:471865-481821	0	+	471865	471865	8553170	6	25,59,142,82,147,137,	0,825,1933,2672,3613,9819,
#Deleted in new
chr5_KV575244v1_fix	473846	481781	chr5_KV575244v1_fix:473846-481781	0	+	473846	481781	8553170	5	94,82,193,102,97,	0,691,1586,7632,7838,
#Deleted in new
chr5_KV575244v1_fix	475253	481861	chr5_KV575244v1_fix:475253-481861	0	+	475253	475253	8553170	2	372,177,	0,6431,
#Deleted in new
chr5_KV575244v1_fix	489057	492315	chr5_KV575244v1_fix:489057-492315	0	+	489057	489057	8553170	3	302,127,56,	0,1179,3202,
#Deleted in new
chr5_KV575244v1_fix	492284	495229	chr5_KV575244v1_fix:492284-495229	0	+	492284	492284	8553170	2	55,290,	0,2655,
#Deleted in new
chr5_KV575244v1_fix	498429	542880	chr5_KV575244v1_fix:498429-542880	3	+	498692	540471	0	5	578,1416,240,97,3392,	0,32494,36013,38311,41059,
#Deleted in new
chr5_KV575244v1_fix	534444	539545	chr5_KV575244v1_fix:534444-539545	0	+	534444	534444	8553170	3	238,97,57,	0,2296,5044,
#Deleted in new
chr5_KV575244v1_fix	536521	540062	chr5_KV575244v1_fix:536521-540062	0	+	536521	536521	8553170	2	316,574,	0,2967,
#Deleted in new
chr5_KV575244v1_fix	559556	562224	chr5_KV575244v1_fix:559556-562224	2	+	559556	559556	8553170	4	159,273,82,395,	0,1604,1961,2273,
#Deleted in new
chr5_KV575244v1_fix	559561	562021	chr5_KV575244v1_fix:559561-562021	0	+	559657	561431	8553170	5	154,83,71,82,192,	0,1616,1801,1956,2268,
#Deleted in new
chr5_KV575244v1_fix	559562	562089	chr5_KV575244v1_fix:559562-562089	1	+	559657	561971	0	5	153,100,71,82,260,	0,1598,1800,1955,2267,
#Deleted in new
chr5_KV575244v1_fix	559569	562087	chr5_KV575244v1_fix:559569-562087	1	+	559657	561971	8553170	3	146,82,258,	0,1948,2260,
#Deleted in new
chr5_KV575244v1_fix	559589	561598	chr5_KV575244v1_fix:559589-561598	0	+	559589	559589	8553170	2	126,438,	0,1571,
#Deleted in new
chr5_KV575244v1_fix	559609	561736	chr5_KV575244v1_fix:559609-561736	1	+	559657	561603	8553170	4	106,100,71,219,	0,1551,1753,1908,
#Deleted in new
chr5_KV575244v1_fix	560884	561891	chr5_KV575244v1_fix:560884-561891	0	+	560884	560884	8553170	4	33,273,82,62,	0,276,633,945,
#Deleted in new
chr5_KV575244v1_fix	561131	561952	chr5_KV575244v1_fix:561131-561952	0	+	561131	561131	8553170	3	302,82,123,	0,386,698,
#Deleted in new
chr5_KV575244v1_fix	563169	572503	chr5_KV575244v1_fix:563169-572503	1	-	563617	572152	789624	15	472,113,88,79,194,108,131,115,76,114,47,134,141,186,448,	0,568,750,916,1331,1606,1909,2357,2587,2887,3310,3737,3957,4187,8886,
#Deleted in new
chr5_KV575244v1_fix	563169	568571	chr5_KV575244v1_fix:563169-568571	1	-	563617	567684	789624	14	472,113,88,79,194,108,131,115,76,114,47,134,141,1215,	0,568,750,916,1331,1606,1909,2357,2587,2887,3310,3737,3957,4187,
#Deleted in new
chr5_KV575244v1_fix	563169	566940	chr5_KV575244v1_fix:563169-566940	0	-	563617	566940	8553170	12	472,113,88,79,194,105,131,115,76,114,47,34,	0,568,750,916,1331,1606,1909,2357,2587,2887,3310,3737,
#Deleted in new
chr5_KV575244v1_fix	563182	567482	chr5_KV575244v1_fix:563182-567482	0	-	563579	567482	8553170	12	459,113,88,79,194,115,76,114,47,134,141,126,	0,555,737,903,1318,2344,2574,2874,3297,3724,3944,4174,
#Deleted in new
chr5_KV575244v1_fix	563243	565209	chr5_KV575244v1_fix:563243-565209	0	-	563617	565209	8553170	7	398,113,88,64,194,108,131,	0,494,676,842,1257,1532,1835,
#Deleted in new
chr5_KV575244v1_fix	563456	565149	chr5_KV575244v1_fix:563456-565149	0	-	563456	563456	8553170	6	185,113,88,194,108,71,	0,281,620,1044,1319,1622,
#Deleted in new
chr5_KV575244v1_fix	563518	566512	chr5_KV575244v1_fix:563518-566512	0	-	563579	566512	8553170	10	123,113,88,79,194,48,115,76,114,33,	0,219,401,567,982,1257,2008,2238,2538,2961,
#Deleted in new
chr5_KV575244v1_fix	563678	564408	chr5_KV575244v1_fix:563678-564408	0	-	563678	563678	8553170	3	172,88,323,	0,241,407,
#Deleted in new
chr5_KV575244v1_fix	563737	566962	chr5_KV575244v1_fix:563737-566962	0	-	563737	563737	8553170	10	113,88,64,57,48,115,76,114,47,56,	0,182,348,900,1038,1789,2019,2319,2742,3169,
#Deleted in new
chr5_KV575244v1_fix	563737	566170	chr5_KV575244v1_fix:563737-566170	0	-	563737	566170	8553170	8	113,88,79,248,131,115,76,114,	0,182,348,763,1341,1789,2019,2319,
#Deleted in new
chr5_KV575244v1_fix	563850	563919	chr5_KV575244v1_fix:563850-563919	3	-	563850	563850	5263520	1	69,	0,
#Deleted in new
chr5_KV575244v1_fix	563979	566518	chr5_KV575244v1_fix:563979-566518	0	-	563979	566518	8553170	9	28,64,57,108,131,115,76,114,39,	0,106,658,796,1099,1547,1777,2077,2500,
#Deleted in new
chr5_KV575244v1_fix	564868	566570	chr5_KV575244v1_fix:564868-566570	0	-	564868	564868	8553170	6	15,131,115,76,114,91,	0,210,658,888,1188,1611,
#Deleted in new
chr5_KV575244v1_fix	565078	566162	chr5_KV575244v1_fix:565078-566162	0	-	565078	565078	8553170	3	563,76,106,	0,678,978,
#Deleted in new
chr5_KV575244v1_fix	565084	571903	chr5_KV575244v1_fix:565084-571903	0	-	565084	567029	8553170	9	125,115,76,114,47,134,141,186,142,	0,442,672,972,1395,1822,2042,2272,6677,
#Deleted in new
chr5_KV575244v1_fix	565296	566004	chr5_KV575244v1_fix:565296-566004	0	-	565296	565296	8553170	2	345,248,	0,460,
#Deleted in new
chr5_KV575244v1_fix	565552	567688	chr5_KV575244v1_fix:565552-567688	0	-	566521	567684	8553170	6	89,76,114,47,141,332,	0,204,504,927,1574,1804,
#Deleted in new
chr5_KV575244v1_fix	566056	569349	chr5_KV575244v1_fix:566056-569349	0	-	566056	566056	8553170	7	114,47,134,141,186,227,364,	0,423,850,1070,1300,2320,2929,
#Deleted in new
chr5_KV575244v1_fix	566510	572123	chr5_KV575244v1_fix:566510-572123	2	-	566982	572123	8553170	5	16,134,139,186,68,	0,396,616,846,5545,
#Deleted in new
chr5_KV575244v1_fix	566906	572521	chr5_KV575244v1_fix:566906-572521	0	-	566906	566906	8553170	3	361,186,466,	0,450,5149,
#Deleted in new
chr5_KV575244v1_fix	566947	571899	chr5_KV575244v1_fix:566947-571899	0	-	566947	566947	8553170	4	93,166,186,147,	0,179,409,4805,
#Deleted in new
chr5_KV575244v1_fix	567379	571893	chr5_KV575244v1_fix:567379-571893	0	-	567379	567379	8553170	3	163,227,132,	0,997,4382,
#Deleted in new
chr5_KV575244v1_fix	567885	571874	chr5_KV575244v1_fix:567885-571874	0	-	567885	567885	8553170	2	718,113,	0,3876,
#Deleted in new
chr5_KV575244v1_fix	568524	570958	chr5_KV575244v1_fix:568524-570958	0	-	568524	568524	8553170	2	79,445,	0,1989,
#Deleted in new
chr5_KV575244v1_fix	586496	587124	chr5_KV575244v1_fix:586496-587124	1	+	586496	587124	8553170	2	205,14,	0,614,
#Deleted in new
chr5_KV575244v1_fix	586496	602214	chr5_KV575244v1_fix:586496-602214	1	+	586496	602214	789624	7	205,96,230,142,81,196,184,	0,2020,2916,3240,4204,12095,15534,
#Deleted in new
chr5_KV575244v1_fix	586496	587124	chr5_KV575244v1_fix:586496-587124	1	+	586496	587124	8553170	2	205,14,	0,614,
#Deleted in new
chr5_KV575244v1_fix	586496	602214	chr5_KV575244v1_fix:586496-602214	3	+	586496	602214	8553170	7	205,96,230,142,81,196,184,	0,2020,2916,3240,4204,12095,15534,
#Deleted in new
chr5_KV575244v1_fix	600692	624420	chr5_KV575244v1_fix:600692-624420	0	-	613574	624356	8553170	9	2072,126,88,158,76,89,80,60,130,	0,2627,5739,6774,9019,12845,18064,18245,23598,
#Deleted in new
chr5_KV575244v1_fix	602193	624366	chr5_KV575244v1_fix:602193-624366	1	-	602737	624356	8553170	8	571,126,88,158,76,89,60,76,	0,1126,4238,5273,7518,11344,16744,22097,
#Deleted in new
chr5_KV575244v1_fix	602361	624357	chr5_KV575244v1_fix:602361-624357	1	-	602737	624356	8553170	6	403,126,88,158,60,67,	0,958,4070,5105,16576,21929,
#Deleted in new
chr5_KV575244v1_fix	602702	603815	chr5_KV575244v1_fix:602702-603815	0	-	602702	602702	8553170	2	62,496,	0,617,
#Deleted in new
chr5_KV575244v1_fix	602825	624368	chr5_KV575244v1_fix:602825-624368	1	-	602950	624356	789624	5	620,88,158,60,78,	0,3606,4641,16112,21465,
#Deleted in new
chr5_KV575244v1_fix	602833	609781	chr5_KV575244v1_fix:602833-609781	0	-	602833	602833	8553170	3	606,65,70,	0,4726,6878,
#Deleted in new
chr5_KV575244v1_fix	602835	624447	chr5_KV575244v1_fix:602835-624447	1	-	602950	624356	789624	7	610,88,158,76,89,60,157,	0,3596,4631,6876,10702,16102,21455,
#Deleted in new
chr5_KV575244v1_fix	602835	624394	chr5_KV575244v1_fix:602835-624394	1	-	602950	607513	8553170	6	610,88,158,76,60,104,	0,3596,4631,6876,16102,21455,
#Deleted in new
chr5_KV575244v1_fix	602835	624368	chr5_KV575244v1_fix:602835-624368	1	-	606389	624356	8553170	6	3684,158,76,89,60,78,	0,4631,6876,10702,16102,21455,
#Deleted in new
chr5_KV575244v1_fix	602836	607580	chr5_KV575244v1_fix:602836-607580	1	-	602950	603428	8553170	4	576,32,88,114,	0,577,3595,4630,
#Deleted in new
chr5_KV575244v1_fix	603086	624404	chr5_KV575244v1_fix:603086-624404	0	-	607590	624356	8553170	6	359,88,158,89,60,114,	0,3345,4380,10451,15851,21204,
#Deleted in new
chr5_KV575244v1_fix	603252	624377	chr5_KV575244v1_fix:603252-624377	1	-	603299	624356	8553170	5	119,55,89,60,87,	0,6480,10285,15685,21038,
#Deleted in new
chr5_KV575244v1_fix	605799	624406	chr5_KV575244v1_fix:605799-624406	0	-	605799	605799	8553170	4	720,158,60,116,	0,1667,13138,18491,
#Deleted in new
chr5_KV575244v1_fix	606149	609885	chr5_KV575244v1_fix:606149-609885	0	-	606149	606149	8553170	3	370,158,174,	0,1317,3562,
#Deleted in new
chr5_KV575244v1_fix	606272	624398	chr5_KV575244v1_fix:606272-624398	0	-	607590	624356	8553170	5	247,158,89,60,108,	0,1194,7265,12665,18018,
#Deleted in new
chr5_KV575244v1_fix	606368	624404	chr5_KV575244v1_fix:606368-624404	2	-	609757	624356	8553170	5	151,158,76,60,114,	0,1098,3343,12569,17922,
#Deleted in new
chr5_KV575244v1_fix	606480	624399	chr5_KV575244v1_fix:606480-624399	0	-	613574	624356	8553170	6	39,158,89,80,60,109,	0,986,7057,12276,12457,17810,
#Deleted in new
chr5_KV575244v1_fix	606828	609780	chr5_KV575244v1_fix:606828-609780	0	-	606828	606828	8553170	3	102,607,69,	0,189,2883,
#Deleted in new
chr5_KV575244v1_fix	607467	624369	chr5_KV575244v1_fix:607467-624369	0	-	613574	624356	8553170	6	157,76,89,95,60,79,	0,2244,6070,9335,11470,16823,
#Deleted in new
chr5_KV575244v1_fix	607567	624368	chr5_KV575244v1_fix:607567-624368	0	-	618781	624356	8553170	5	57,76,89,241,78,	0,2144,5970,11189,16723,
#Deleted in new
chr5_KV575244v1_fix	607606	624368	chr5_KV575244v1_fix:607606-624368	0	-	616918	624356	8553170	6	18,76,89,182,60,78,	0,2105,5931,9196,11331,16684,
#Deleted in new
chr5_KV575244v1_fix	609733	624404	chr5_KV575244v1_fix:609733-624404	0	-	616905	624356	8553170	6	54,89,182,80,60,114,	0,3804,7069,9023,9204,14557,
#Deleted in new
chr5_KV575244v1_fix	611391	611712	chr5_KV575244v1_fix:611391-611712	3	+	611391	611391	8553170	1	321,	0,
#Deleted in new
chr5_KV575244v1_fix	612594	612690	chr5_KV575244v1_fix:612594-612690	3	-	612594	612594	8553170	1	96,	0,
#Deleted in new
chr5_KV575244v1_fix	612916	624368	chr5_KV575244v1_fix:612916-624368	0	-	612916	612916	8553170	3	710,60,78,	0,6021,11374,
#Deleted in new
chr5_KV575244v1_fix	616652	624366	chr5_KV575244v1_fix:616652-624366	0	-	616652	616652	8553170	4	332,80,60,76,	0,2104,2285,7638,
#Deleted in new
chr5_KV575244v1_fix	618842	627733	chr5_KV575244v1_fix:618842-627733	0	-	618842	618842	8553170	3	155,194,213,	0,7231,8678,
#Deleted in new
chr5_KV575244v1_fix	624572	626843	chr5_KV575244v1_fix:624572-626843	3	+	624572	624572	789624	2	200,1254,	0,1017,
#Partially deleted in new
chr6	95123	95454	chr6:95123-95454	7	+	95123	95123	16724991	1	331,	0,
#Deleted in new
chr6	105918	106856	chr6:105918-106856	7	-	105918	105918	16724991	1	938,	0,
#Partially deleted in new
chr6	131909	144885	chr6:131909-144885	7	-	131909	131909	16724991	3	208,169,350,	0,8301,12626,
#Deleted in new
chr6	142271	145083	chr6:142271-145083	5	-	142271	142271	16724991	1	2812,	0,
#Partially deleted in new
chr6	167606	170631	chr6:167606-170631	7	-	167606	167606	16724991	3	220,209,280,	0,1938,2745,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	181465	205484	chr6:181465-205484	3	-	181465	181465	789624	8	230,109,217,206,171,174,345,598,	0,900,3127,4890,6270,8010,16699,23421,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	184338	186899	chr6:184338-186899	3	+	184338	184338	8553170	2	33,2394,	0,167,
#Partially deleted in new
chr6	203312	206392	chr6:203312-206392	3	+	203312	203312	8553170	2	1101,906,	0,2174,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	203326	204526	chr6:203326-204526	0	+	203326	203326	8553170	2	112,564,	0,636,
#Partially deleted in new
chr6	291629	348194	chr6:291629-348194	0	+	311953	348194	789624	6	71,34,83,50,75,92,	0,12998,20250,43484,54224,56473,
#Partially deleted in new
chr6	292096	351355	chr6:292096-351355	3	+	292539	350868	0	8	464,34,83,50,75,172,73,534,	0,12531,19783,43017,53757,56006,56672,58725,
#Partially deleted in new
chr6	292273	348954	chr6:292273-348954	1	+	348148	348951	789624	6	287,34,50,75,172,186,	0,12354,42840,53580,55829,56495,
#Partially deleted in new
chr6	292274	349102	chr6:292274-349102	1	+	348148	348951	789624	4	286,75,172,334,	0,53579,55828,56494,
#Partially deleted in new
chr6	292383	348232	chr6:292383-348232	0	+	348176	348232	789624	4	177,83,75,130,	0,19496,53470,55719,
#Partially deleted in new
chr6	292461	351353	chr6:292461-351353	1	+	292539	348951	0	7	99,34,83,50,75,172,2585,	0,12166,19418,42652,53392,55641,56307,
#Partially deleted in new
chr6	292461	349471	chr6:292461-349471	0	+	292539	345880	789624	6	99,34,83,75,172,703,	0,12166,19418,53392,55641,56307,
#Partially deleted in new
chr6	292476	349057	chr6:292476-349057	1	+	348148	348289	789624	5	84,34,83,75,955,	0,12151,19403,53377,55626,
#Partially deleted in new
chr6	292478	348496	chr6:292478-348496	1	+	348148	348289	789624	3	82,75,394,	0,53375,55624,
#Partially deleted in new
chr6	292519	348269	chr6:292519-348269	0	+	292519	292519	8553170	5	41,34,35,75,167,	0,12108,19360,53334,55583,
#Partially deleted in new
chr6	292539	350950	chr6:292539-350950	0	+	292539	345880	789624	7	21,34,83,75,172,73,129,	0,12088,19340,53314,55563,56229,58282,
#Partially deleted in new
chr6	319925	345912	chr6:319925-345912	0	+	319925	319925	8553170	3	439,50,59,	0,15188,25928,
#Partially deleted in new
chr6	319951	348161	chr6:319951-348161	0	+	319951	319951	8553170	3	413,75,59,	0,25902,28151,
#Partially deleted in new
chr6	325166	351353	chr6:325166-351353	1	+	348148	348951	789624	4	992,75,172,2585,	0,20687,22936,23602,
#Partially deleted in new
chr6	337038	348908	chr6:337038-348908	0	+	337038	337038	8553170	4	149,75,172,140,	0,8815,11064,11730,
#Partially deleted in new
chr6	338005	350928	chr6:338005-350928	0	+	338005	338005	8553170	5	76,75,172,73,107,	0,7848,10097,10763,12816,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	391738	411447	chr6:391738-411447	3	+	393152	407598	0	9	71,271,187,89,145,108,354,113,3993,	0,1359,3082,4108,5369,7089,9685,13279,15716,
#Partially deleted in new
chr6	391751	396074	chr6:391751-396074	0	+	391751	391751	8553170	3	58,187,228,	0,3069,4095,
#Partially deleted in new
chr6	391767	407618	chr6:391767-407618	0	+	393152	406786	789624	10	42,271,187,89,145,108,354,113,134,164,	0,1330,3053,4079,5340,7060,9656,13250,14998,15687,
#Partially deleted in new
chr6	391767	397546	chr6:391767-397546	0	+	391767	391767	8553170	4	42,187,89,439,	0,3053,4079,5340,
#Partially deleted in new
chr6	393278	395915	chr6:393278-395915	0	+	393278	393278	8553170	3	90,187,69,	0,1542,2568,
#Partially deleted in new
chr6	485132	693111	chr6:485132-693111	3	-	486670	637818	789624	28	1632,60,62,123,56,142,117,67,62,60,81,62,122,158,66,125,126,119,103,82,146,81,125,114,127,177,161,93,	0,3846,5992,12234,14512,47336,64042,68721,70094,70821,71351,77651,78900,79412,79731,87387,91624,107336,112888,113727,113947,124965,132578,134297,144702,147808,152568,207886,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	524170	525581	chr6:524170-525581	3	+	524170	524170	8553170	2	142,709,	0,702,
#Partially deleted in new
chr6	629834	693111	chr6:629834-693111	0	-	629834	637818	789624	6	127,177,161,88,74,93,	0,3106,7866,27328,59304,63184,
#Deleted in new
chr6	655938	656963	chr6:655938-656963	3	-	656107	656944	789624	1	1025,	0,
#Deleted in new
chr6	669080	670307	chr6:669080-670307	7	-	669080	669080	16724991	1	1227,	0,
#Partially deleted in new
chr6	679142	693108	chr6:679142-693108	0	-	679142	679142	8553170	3	372,74,90,	0,9996,13876,
#Deleted in new
chr6	708591	711405	chr6:708591-711405	3	-	708591	708591	8553170	1	2814,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	761674	780648	chr6:761674-780648	3	+	761674	761674	8553170	3	1207,126,722,	0,17085,18252,
#Partially deleted in new
chr6	774746	780214	chr6:774746-780214	3	-	774746	774746	8553170	2	2223,213,	0,5255,
#Partially deleted in new
chr6	905444	909006	chr6:905444-909006	3	-	905444	905444	8553170	2	1933,32,	0,3530,
#Partially deleted in new
chr6	958323	962272	chr6:958323-962272	3	-	958323	958323	8553170	2	267,137,	0,3812,
#Deleted in new
chr6	1026493	1027225	chr6:1026493-1027225	3	-	1026493	1026493	8553170	1	732,	0,
#Partially deleted in new
chr6	1079928	1104946	chr6:1079928-1104946	3	+	1079928	1079928	8553170	3	66,228,3141,	0,21140,21877,
#Deleted in new
chr6	1312439	1314748	chr6:1312439-1314748	3	+	1312704	1313916	789624	1	2309,	0,
#Partially deleted in new
chr6	1321697	1324022	chr6:1321697-1324022	3	-	1321697	1321697	8553170	2	289,124,	0,2201,
#Deleted in new
chr6	1383789	1385066	chr6:1383789-1385066	3	-	1383789	1383789	8553170	1	1277,	0,
#Deleted in new
chr6	1389575	1395603	chr6:1389575-1395603	3	+	1389947	1394859	789624	2	1543,908,	0,5120,
#Deleted in new
chr6	1389833	1395603	chr6:1389833-1395603	1	+	1389947	1394859	789624	2	1285,908,	0,4862,
#Deleted in new
chr6	1390313	1390411	chr6:1390313-1390411	3	-	1390313	1390313	5263520	1	98,	0,
#Deleted in new
chr6	1507321	1507598	chr6:1507321-1507598	3	+	1507321	1507321	8553170	1	277,	0,
#Deleted in new
chr6	1513697	1515289	chr6:1513697-1515289	7	-	1513697	1513697	16724991	1	1592,	0,
#Deleted in new
chr6	1528363	1528911	chr6:1528363-1528911	3	-	1528363	1528363	8553170	1	548,	0,
#Deleted in new
chr6	1605530	1606079	chr6:1605530-1606079	3	+	1605530	1605530	8553170	2	269,64,	0,485,
#Deleted in new
chr6	1609971	1613897	chr6:1609971-1613897	3	+	1610445	1612107	789624	1	3926,	0,
#Deleted in new
chr6	1610066	1613897	chr6:1610066-1613897	1	+	1610445	1612107	789624	1	3831,	0,
#Partially deleted in new
chr6	1623805	2245692	chr6:1623805-2245692	3	-	1624168	2245422	0	11	426,69,97,119,128,105,193,110,88,45,372,	0,666,102610,118662,306297,336061,336968,491965,493663,500881,621515,
#Deleted in new
chr6	1623805	1625501	chr6:1623805-1625501	0	-	1623805	1623805	8553170	3	426,69,405,	0,666,1291,
#Deleted in new
chr6	1623805	1624740	chr6:1623805-1624740	0	-	1623805	1623805	8553170	3	426,69,96,	0,666,839,
#Deleted in new
chr6	1623805	1626188	chr6:1623805-1626188	0	-	1623805	1623805	8553170	3	426,69,72,	0,666,2311,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	1623805	2175991	chr6:1623805-2175991	1	-	1624168	2175943	0	11	426,69,97,119,128,105,193,110,88,45,60,	0,666,102610,118662,306297,336061,336968,491965,493663,500881,552126,
#Partially deleted in new
chr6	1623806	1930999	chr6:1623806-1930999	0	-	1623806	1623806	8553170	6	425,69,136,97,119,897,	0,665,93701,102609,118661,306296,
#Partially deleted in new
chr6	1679171	1726477	chr6:1679171-1726477	0	-	1679171	1679171	8553170	2	755,62,	0,47244,
#Partially deleted in new
chr6	1717594	1960790	chr6:1717594-1960790	0	-	1717594	1717594	8553170	6	49,97,119,128,105,17,	0,8821,24873,212508,242272,243179,
#Partially deleted in new
chr6	1930106	2043433	chr6:1930106-2043433	0	-	1930106	1930106	8553170	4	124,105,193,98,	0,29760,30667,113229,
#Deleted in new
chr6	1959705	1960909	chr6:1959705-1960909	0	-	1959705	1959705	8553170	2	266,136,	0,1068,
#Partially deleted in new
chr6	2227802	2230261	chr6:2227802-2230261	3	+	2227802	2227802	8553170	2	212,596,	0,1863,
#Partially deleted in new
chr6	2245747	2399001	chr6:2245747-2399001	0	+	2245747	2245747	8553170	4	183,90,202,119,	0,3089,152829,153135,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	2245767	2397346	chr6:2245767-2397346	0	+	2245767	2245767	8553170	5	163,90,84,102,126,	0,3069,17833,23930,151453,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	2245767	2398766	chr6:2245767-2398766	2	+	2245767	2245767	8553170	5	163,90,84,102,190,	0,3069,17833,23930,152809,
#Partially deleted in new
chr6	2245770	2398664	chr6:2245770-2398664	0	+	2245770	2245770	8553170	4	160,90,406,88,	0,3066,151450,152806,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	2245776	2283774	chr6:2245776-2283774	1	+	2245776	2245776	8553170	6	154,90,84,102,1602,276,	0,3060,17824,23921,26039,37722,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	2245781	2398747	chr6:2245781-2398747	1	+	2245781	2245781	8553170	5	149,90,84,406,171,	0,3055,17819,151439,152795,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	2245824	2264128	chr6:2245824-2264128	0	+	2245824	2245824	8553170	3	106,90,528,	0,3012,17776,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	2245840	2283773	chr6:2245840-2283773	0	+	2245840	2245840	8553170	4	90,90,84,275,	0,2996,17760,37658,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	2245841	2412830	chr6:2245841-2412830	1	+	2245841	2245841	789624	7	89,90,84,50,202,172,51,	0,2995,17759,83441,152735,153024,166938,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	2245852	2270013	chr6:2245852-2270013	0	+	2245852	2245852	8553170	4	78,90,84,316,	0,2984,17748,23845,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	2245854	2367315	chr6:2245854-2367315	0	+	2245854	2245854	8553170	5	76,90,84,102,372,	0,2982,17746,23843,121089,
#Partially deleted in new
chr6	2341449	2341711	chr6:2341449-2341711	7	+	2341449	2341449	16724991	1	262,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	2391545	2413591	chr6:2391545-2413591	1	+	2391545	2391545	8553170	3	7233,172,812,	0,7320,21234,
#Partially deleted in new
chr6	2398576	2413548	chr6:2398576-2413548	0	+	2398576	2398576	8553170	3	202,172,1062,	0,289,13910,
#Partially deleted in new
chr6	2398656	2481118	chr6:2398656-2481118	0	+	2398656	2398656	8553170	3	122,172,285,	0,209,82177,
#Deleted in new
chr6	2437548	2438249	chr6:2437548-2438249	3	+	2437548	2437548	8553170	1	701,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	2452410	2482022	chr6:2452410-2482022	1	+	2452410	2452410	8553170	4	150,58,336,36,	0,1553,28423,29576,
#Deleted in new
chr6	2561946	2564143	chr6:2561946-2564143	3	+	2561946	2561946	8553170	1	2197,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	2621912	2634603	chr6:2621912-2634603	3	-	2621912	2621912	789624	3	2207,188,39,	0,11692,12652,
#Partially deleted in new
chr6	2634499	2640001	chr6:2634499-2640001	1	+	2634499	2634499	8553170	4	256,74,519,314,	0,2023,2437,5188,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	2663628	2750966	chr6:2663628-2750966	3	-	2671300	2749294	0	13	4271,73,79,153,129,71,142,110,94,106,76,271,231,	0,7647,11418,14591,15651,16592,19392,21667,21854,25222,29155,85507,87107,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	2663628	2744148	chr6:2663628-2744148	1	-	2671300	2744036	789624	12	4271,73,79,153,129,71,142,110,94,106,76,253,	0,7647,11418,14591,15651,16592,19392,21667,21854,25222,29155,80267,
#Partially deleted in new
chr6	2765413	2785745	chr6:2765413-2785745	1	+	2765622	2785282	0	7	1031,192,167,230,156,80,739,	0,3277,4781,13849,17992,18910,19593,
#Partially deleted in new
chr6	2765413	2785745	chr6:2765413-2785745	3	+	2765622	2785282	0	7	1031,192,242,230,156,80,739,	0,3277,4706,13849,17992,18910,19593,
#Partially deleted in new
chr6	2765431	2785744	chr6:2765431-2785744	1	+	2765622	2785282	0	7	1013,192,242,230,156,80,738,	0,3259,4688,13831,17974,18892,19575,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	2766051	2786952	chr6:2766051-2786952	1	+	2766282	2785282	0	7	393,192,242,230,156,80,1946,	0,2639,4068,13211,17354,18272,18955,
#Partially deleted in new
chr6	2768772	2785745	chr6:2768772-2785745	1	+	2770257	2785282	0	6	110,242,230,156,80,739,	0,1347,10490,14633,15551,16234,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	2832331	2842006	chr6:2832331-2842006	3	-	2833607	2840586	0	7	1681,168,143,118,138,176,195,	0,3524,3776,5550,6217,8087,9480,
#Partially deleted in new
chr6	2833511	2837999	chr6:2833511-2837999	0	-	2833511	2833511	8553170	3	188,143,118,	0,2596,4370,
#Partially deleted in new
chr6	2835855	2841959	chr6:2835855-2841959	0	-	2835855	2835855	8553170	6	168,143,118,138,67,148,	0,252,2026,2693,4563,5956,
#Partially deleted in new
chr6	2836107	2841848	chr6:2836107-2841848	0	-	2836107	2836107	8553170	6	143,118,138,176,260,37,	0,1774,2441,4311,5108,5704,
#Deleted in new
chr6	2838548	2841862	chr6:2838548-2841862	0	-	2838548	2838548	8553170	3	138,176,266,	0,1870,3048,
#Deleted in new
chr6	2854030	2854107	chr6:2854030-2854107	3	-	2854030	2854030	5263520	1	77,	0,
#Partially deleted in new
chr6	2854656	2881407	chr6:2854656-2881407	3	-	2854656	2854656	8553170	4	1034,85,133,123,	0,3254,21636,26628,
#Partially deleted in new
chr6	2854925	2876510	chr6:2854925-2876510	0	-	2854925	2854925	789624	2	765,218,	0,21367,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	2887265	2903280	chr6:2887265-2903280	3	-	2890162	2900611	789624	7	3305,156,143,118,138,178,80,	0,4567,6145,8125,8787,13178,15935,
#Partially deleted in new
chr6	2910612	2912113	chr6:2910612-2912113	7	-	2910612	2910612	16724991	2	69,124,	0,1377,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	2916893	2917733	chr6:2916893-2917733	3	+	2916893	2916893	8553170	2	112,372,	0,468,
#Partially deleted in new
chr6	2948158	2971856	chr6:2948158-2971856	3	-	2948297	2959332	789624	7	541,156,143,118,147,175,324,	0,755,4885,6433,7365,11009,23374,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	2948158	2962108	chr6:2948158-2962108	1	-	2948297	2959332	789624	7	541,156,143,118,147,175,215,	0,755,4885,6433,7365,11009,13735,
#Partially deleted in new
chr6	2948158	2971206	chr6:2948158-2971206	1	-	2948297	2959332	789624	7	541,156,143,118,147,175,90,	0,755,4885,6433,7365,11009,22958,
#Partially deleted in new
chr6	2948158	2971567	chr6:2948158-2971567	1	-	2948297	2959332	789624	7	541,156,143,118,147,175,35,	0,755,4885,6433,7365,11009,23374,
#Partially deleted in new
chr6	2948158	2971585	chr6:2948158-2971585	1	-	2948297	2959332	789624	7	541,156,143,118,147,175,95,	0,755,4885,6433,7365,11009,23332,
#Partially deleted in new
chr6	2948158	2971605	chr6:2948158-2971605	1	-	2948297	2959332	789624	7	541,156,143,118,147,175,358,	0,755,4885,6433,7365,11009,23089,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	2948158	2961327	chr6:2948158-2961327	0	-	2948158	2948158	8553170	6	541,156,143,118,147,2160,	0,755,4885,6433,7365,11009,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	2948159	2957588	chr6:2948159-2957588	0	-	2948159	2948159	8553170	6	540,156,143,118,147,1084,	0,754,4884,6432,7364,8345,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	2948161	2970745	chr6:2948161-2970745	0	-	2960364	2968811	8553170	9	538,156,143,118,147,175,118,127,1967,	0,752,4882,6430,7362,11006,12099,12808,20617,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	2948162	2970743	chr6:2948162-2970743	1	-	2948297	2959332	789624	7	537,156,143,118,147,175,4344,	0,751,4881,6429,7361,11005,18237,
#Partially deleted in new
chr6	2948163	2971048	chr6:2948163-2971048	1	-	2948297	2970804	789624	7	536,156,143,118,147,175,291,	0,750,4880,6428,7360,11004,22594,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	2948163	2958169	chr6:2948163-2958169	0	-	2948163	2948163	8553170	5	536,156,143,118,2646,	0,750,4880,6428,7360,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	2948169	2955882	chr6:2948169-2955882	0	-	2948169	2948169	8553170	4	530,156,143,1291,	0,744,4874,6422,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	2948170	2972165	chr6:2948170-2972165	1	-	2948297	2968780	789624	8	529,156,143,118,147,175,135,633,	0,743,4873,6421,7353,10997,20608,23362,
#Partially deleted in new
chr6	2948174	2971276	chr6:2948174-2971276	1	-	2948297	2968811	789624	7	525,156,143,118,147,135,160,	0,739,4869,6417,7349,20604,22942,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	2948192	2971644	chr6:2948192-2971644	1	-	2948297	2959332	789624	8	507,156,143,118,147,175,136,112,	0,721,4851,6399,7331,10975,13701,23340,
#Partially deleted in new
chr6	2948195	2971661	chr6:2948195-2971661	1	-	2948297	2959332	789624	7	504,156,143,118,147,175,70,	0,718,4848,6396,7328,10972,23396,
#Partially deleted in new
chr6	2948216	2970714	chr6:2948216-2970714	1	-	2948297	2968780	789624	8	483,156,143,118,147,175,324,19,	0,697,4827,6375,7307,10951,20562,22479,
#Partially deleted in new
chr6	2948965	2964005	chr6:2948965-2964005	0	-	2948965	2963397	789624	5	104,143,118,147,611,	0,4078,5626,6558,14429,
#Partially deleted in new
chr6	2954702	2971777	chr6:2954702-2971777	0	-	2954702	2955568	789624	4	7,147,115,245,	0,821,14096,16830,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	2955604	2971331	chr6:2955604-2971331	0	-	2955604	2959332	789624	4	66,175,127,84,	0,3563,5365,15643,
#Partially deleted in new
chr6	2955604	2971354	chr6:2955604-2971354	0	-	2955604	2959332	789624	4	66,175,129,107,	0,3563,15091,15643,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	2955651	2971284	chr6:2955651-2971284	0	-	2955651	2959332	789624	4	19,175,127,168,	0,3516,5318,15465,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	2955654	2971238	chr6:2955654-2971238	0	-	2955654	2959332	789624	4	16,175,191,543,	0,3513,10745,15041,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	2959297	2962139	chr6:2959297-2962139	0	-	2959297	2959332	789624	4	45,118,127,246,	0,963,1672,2596,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	2987966	2991173	chr6:2987966-2991173	1	+	2987966	2987966	789624	2	65,2746,	0,461,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	2987966	2990348	chr6:2987966-2990348	0	+	2987966	2987966	8553170	2	65,821,	0,1561,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	2987986	3012561	chr6:2987986-3012561	0	+	3006552	3012561	789624	6	45,183,123,92,165,18,	0,1541,5944,18481,22038,24557,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	2988645	3015643	chr6:2988645-3015643	0	+	3006552	3015643	789624	6	64,123,92,165,131,114,	0,5285,17822,21379,23898,26884,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	2988647	2991173	chr6:2988647-2991173	3	+	2988647	2988647	8553170	3	62,206,1305,	0,880,1221,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	2988657	2990252	chr6:2988657-2990252	0	+	2988657	2988657	8553170	2	52,725,	0,870,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	2989721	2998743	chr6:2989721-2998743	3	-	2989721	2989721	8553170	2	290,127,	0,8895,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	2989725	2999134	chr6:2989725-2999134	0	-	2989725	2989725	8553170	2	286,122,	0,9287,
#Partially deleted in new
chr6	2999875	3015643	chr6:2999875-3015643	0	+	3006552	3015643	789624	6	210,121,92,165,131,114,	0,3793,6592,10149,12668,15654,
#Partially deleted in new
chr6	2999973	3019762	chr6:2999973-3019762	1	+	3006552	3019655	0	10	112,237,121,157,92,165,131,114,102,284,	0,2076,3695,4521,6494,10051,12570,15556,16910,19505,
#Partially deleted in new
chr6	2999988	3019755	chr6:2999988-3019755	1	+	3006552	3019655	789624	7	97,157,92,165,131,102,277,	0,4506,6479,10036,12555,16895,19490,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	2999996	3028869	chr6:2999996-3028869	3	+	3006552	3019655	0	7	89,92,165,131,114,102,9391,	0,6471,10028,12547,15533,16887,19482,
#Partially deleted in new
chr6	3000001	3019755	chr6:3000001-3019755	1	+	3006552	3019655	789624	6	84,92,165,131,102,277,	0,6466,10023,12542,16882,19477,
#Partially deleted in new
chr6	3000157	3019762	chr6:3000157-3019762	1	+	3006552	3019655	0	7	210,92,165,131,114,102,284,	0,6310,9867,12386,15372,16726,19321,
#Partially deleted in new
chr6	3004166	3010189	chr6:3004166-3010189	1	+	3006552	3006916	789624	4	93,92,120,165,	0,2301,2649,5858,
#Deleted in new
chr6	3023141	3023772	chr6:3023141-3023772	7	-	3023141	3023141	16724991	1	631,	0,
#Deleted in new
chr6	3033182	3033288	chr6:3033182-3033288	7	+	3033182	3033182	16724991	1	106,	0,
#Deleted in new
chr6	3045383	3045800	chr6:3045383-3045800	7	+	3045383	3045383	16724991	1	417,	0,
#Deleted in new
chr6	3048834	3049211	chr6:3048834-3049211	7	+	3048834	3048834	16724991	1	377,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	3055848	3057357	chr6:3055848-3057357	3	+	3055848	3055848	8553170	2	176,856,	0,653,
#Partially deleted in new
chr6	3063990	3106051	chr6:3063990-3106051	0	+	3063990	3063990	8553170	8	69,157,138,229,150,77,91,570,	0,13788,16988,19094,21268,25590,40234,41491,
#Deleted in new
chr6	3068044	3068894	chr6:3068044-3068894	3	-	3068044	3068044	8553170	1	850,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	3068423	3115185	chr6:3068423-3115185	3	+	3076823	3113339	0	11	238,224,157,138,229,150,77,91,570,153,2133,	0,8340,9355,12555,14661,16835,21157,35801,37058,42379,44629,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	3076823	3115187	chr6:3076823-3115187	1	+	3076823	3113339	0	10	164,157,138,229,150,77,91,570,153,2135,	0,955,4155,6261,8435,12757,27401,28658,33979,36229,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	3088685	3088809	chr6:3088685-3088809	7	-	3088685	3088685	16724991	1	124,	0,
#Partially deleted in new
chr6	3118373	3152575	chr6:3118373-3152575	1	+	3119456	3152575	0	8	189,228,104,167,154,132,124,88,	0,911,5283,8868,10671,18988,22012,34114,
#Partially deleted in new
chr6	3118375	3152669	chr6:3118375-3152669	0	+	3118740	3119312	789624	8	472,228,104,167,154,132,124,182,	0,909,5281,8866,10669,18986,22010,34112,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	3118375	3153195	chr6:3118375-3153195	0	+	3118740	3119312	789624	9	472,228,104,167,154,61,139,124,708,	0,909,5281,8866,10669,18986,19665,22010,34112,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	3118691	3153578	chr6:3118691-3153578	3	+	3118740	3152575	0	7	156,104,167,154,132,124,1091,	0,4965,8550,10353,18670,21694,33796,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	3118691	3152645	chr6:3118691-3152645	0	+	3118740	3138083	789624	8	156,104,167,154,61,139,124,158,	0,4965,8550,10353,18670,19349,21694,33796,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	3118725	3153062	chr6:3118725-3153062	0	+	3118725	3118725	8553170	7	122,104,167,154,132,2469,575,	0,4931,8516,10319,18636,19315,33762,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	3118727	3124143	chr6:3118727-3124143	0	+	3118727	3118727	8553170	2	120,487,	0,4929,
#Partially deleted in new
chr6	3119325	3152669	chr6:3119325-3152669	1	+	3119456	3152575	0	7	187,104,167,154,132,124,182,	0,4331,7916,9719,18036,21060,33162,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	3126795	3152533	chr6:3126795-3152533	0	+	3126795	3126795	8553170	6	613,154,61,139,124,46,	0,2249,10566,11245,13590,25692,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	3138393	3153062	chr6:3138393-3153062	3	-	3138393	3138393	8553170	2	151,544,	0,14125,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	3140424	3153028	chr6:3140424-3153028	0	+	3140424	3152541	789624	2	85,491,	0,12113,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	3150013	3153046	chr6:3150013-3153046	0	+	3150013	3150013	8553170	2	132,559,	0,2474,
#Deleted in new
chr6	3153668	3157526	chr6:3153668-3157526	3	-	3153862	3157463	789624	4	1255,111,109,120,	0,1956,2375,3738,
#Deleted in new
chr6	3154578	3157526	chr6:3154578-3157526	0	-	3154578	3154578	8553170	4	477,111,109,120,	0,1046,1465,2828,
#Partially deleted in new
chr6	3177043	3179764	chr6:3177043-3179764	7	-	3177043	3177043	16724991	3	599,111,161,	0,1888,2560,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	3182743	3195747	chr6:3182743-3195747	0	-	3182743	3182743	8553170	3	983,404,82,	0,8083,12922,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	3182743	3195756	chr6:3182743-3195756	3	-	3182743	3182743	789624	3	983,431,91,	0,8083,12922,
#Partially deleted in new
chr6	3224260	3227735	chr6:3224260-3227735	3	-	3224750	3227543	789624	4	1551,111,109,249,	0,1898,2300,3226,
#Partially deleted in new
chr6	3224282	3231730	chr6:3224282-3231730	0	-	3224282	3224282	8553170	4	1529,111,109,174,	0,1876,2278,7274,
#Partially deleted in new
chr6	3231402	3270835	chr6:3231402-3270835	0	+	3232088	3244126	789624	3	760,161,1320,	0,12690,38113,
#Partially deleted in new
chr6	3231806	3267781	chr6:3231806-3267781	1	+	3232088	3267712	789624	3	356,179,191,	0,23244,35784,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	3231828	3237865	chr6:3231828-3237865	0	+	3231828	3231828	8553170	2	83,531,	0,5506,
#Partially deleted in new
chr6	3258893	3268049	chr6:3258893-3268049	3	+	3259022	3267712	0	3	303,76,459,	0,4790,8697,
#Partially deleted in new
chr6	3258896	3267779	chr6:3258896-3267779	1	+	3259022	3267665	789624	2	300,189,	0,8694,
#Partially deleted in new
chr6	3258951	3267781	chr6:3258951-3267781	1	+	3259022	3267712	0	4	245,76,117,191,	0,4732,5257,8639,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	3258960	3268050	chr6:3258960-3268050	1	+	3259022	3263824	0	2	236,4367,	0,4723,
#Partially deleted in new
chr6	3258976	3267920	chr6:3258976-3267920	0	+	3259022	3264250	789624	4	220,76,152,330,	0,4707,5197,8614,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	3258983	3303373	chr6:3258983-3303373	1	+	3259022	3282292	789624	3	213,95,516,	0,23252,43874,
#Partially deleted in new
chr6	3259059	3291984	chr6:3259059-3291984	0	+	3259059	3290014	789624	2	137,2186,	0,30739,
#Partially deleted in new
chr6	3268961	3457022	chr6:3268961-3457022	1	-	3273054	3456559	789624	11	4451,124,24,33,233,103,128,169,155,104,1117,	0,14890,15974,16117,17897,20802,29129,54872,141226,146790,186944,
#Partially deleted in new
chr6	3269457	3456559	chr6:3269457-3456559	3	-	3273054	3456559	789624	10	3955,124,33,233,103,128,169,155,104,654,	0,14394,15621,17401,20306,28633,54376,140730,146294,186448,
#Partially deleted in new
chr6	3271773	3445013	chr6:3271773-3445013	1	-	3273054	3410257	789624	10	1639,124,33,233,103,128,169,155,104,195,	0,12078,13305,15085,17990,26317,52060,138414,143978,173045,
#Partially deleted in new
chr6	3271773	3444969	chr6:3271773-3444969	0	-	3323278	3410257	789624	12	718,584,124,33,233,103,128,53,169,155,104,151,	0,1055,12078,13305,15085,17990,26317,51492,52060,138414,143978,173045,
#Partially deleted in new
chr6	3272829	3444984	chr6:3272829-3444984	1	-	3273054	3410257	789624	11	583,124,33,233,103,128,169,155,104,245,166,	0,11022,12249,14029,16934,25261,51004,137358,142922,159264,171989,
#Partially deleted in new
chr6	3273355	3284120	chr6:3273355-3284120	0	-	3273355	3273355	8553170	3	57,296,269,	0,3325,10496,
#Partially deleted in new
chr6	3283464	3456043	chr6:3283464-3456043	0	-	3283715	3456043	789624	9	511,33,233,103,128,169,155,104,138,	0,1614,3394,6299,14626,40369,126723,132287,172441,
#Partially deleted in new
chr6	3283873	3439418	chr6:3283873-3439418	0	-	3283873	3439356	789624	10	102,33,233,103,128,169,155,104,72,122,	0,1205,2985,5890,14217,39960,126314,131878,154610,155423,
#Partially deleted in new
chr6	3286983	3324183	chr6:3286983-3324183	0	-	3286983	3286983	8553170	5	108,103,128,116,87,	0,2780,11107,36903,37113,
#Partially deleted in new
chr6	3289765	3377986	chr6:3289765-3377986	0	-	3289765	3289765	8553170	4	101,128,169,163,	0,8325,34068,88058,
#Deleted in new
chr6	3311661	3313650	chr6:3311661-3313650	3	+	3311661	3311661	8553170	1	1989,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	3323341	3456559	chr6:3323341-3456559	1	-	3323829	3456559	789624	4	661,155,104,654,	0,86846,92410,132564,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	3323341	3324165	chr6:3323341-3324165	0	-	3323341	3323341	8553170	2	661,69,	0,755,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	3594246	3624747	chr6:3594246-3624747	3	-	3594246	3594246	8553170	3	289,296,204,	0,29401,30297,
#Partially deleted in new
chr6	3693922	3694075	chr6:3693922-3694075	7	-	3693922	3693922	16724991	1	153,	0,
#Partially deleted in new
chr6	3722613	3751532	chr6:3722613-3751532	0	-	3722613	3722613	8553170	5	1123,112,118,87,257,	0,4937,14465,15448,28662,
#Partially deleted in new
chr6	3722619	3738894	chr6:3722619-3738894	0	-	3723618	3738894	789624	5	1117,112,118,92,99,	0,4931,14459,15437,16176,
#Partially deleted in new
chr6	3722619	3752026	chr6:3722619-3752026	3	-	3723618	3751531	789624	5	1117,112,118,92,751,	0,4931,14459,15437,28656,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	3738795	3751529	chr6:3738795-3751529	0	-	3738795	3738795	8553170	3	174,104,254,	0,262,12480,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	3751110	3753871	chr6:3751110-3753871	3	+	3751110	3751110	8553170	1	2761,	0,
#Partially deleted in new
chr6	3754098	3754840	chr6:3754098-3754840	7	+	3754098	3754098	16724991	2	304,132,	0,610,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	3831932	3855737	chr6:3831932-3855737	1	+	3831932	3831932	8553170	2	79,268,	0,23537,
#Partially deleted in new
chr6	3831932	3833896	chr6:3831932-3833896	3	+	3831932	3831932	8553170	2	79,282,	0,1682,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	3831935	3894243	chr6:3831935-3894243	1	+	3831935	3831935	8553170	5	76,113,185,163,205,	0,45103,61126,61444,62103,
#Deleted in new
chr6	3849372	3851317	chr6:3849372-3851317	3	+	3849811	3850789	789624	2	114,1529,	0,416,
#Deleted in new
chr6	3849385	3851320	chr6:3849385-3851320	1	+	3849811	3850789	789624	1	1935,	0,
#Deleted in new
chr6	3849387	3851317	chr6:3849387-3851317	1	+	3849811	3850789	789624	2	99,1529,	0,401,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	3893125	3894292	chr6:3893125-3894292	2	+	3893125	3893125	8553170	3	126,63,254,	0,354,913,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	3893839	3894290	chr6:3893839-3894290	0	+	3893839	3893839	8553170	1	451,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	3904919	3911979	chr6:3904919-3911979	3	-	3904919	3904919	8553170	1	7060,	0,
#Partially deleted in new
chr6	3913921	3914292	chr6:3913921-3914292	7	-	3913921	3913921	16724991	1	371,	0,
#Deleted in new
chr6	3921846	3922146	chr6:3921846-3922146	7	+	3921846	3921846	16724991	1	300,	0,
#Deleted in new
chr6	3941281	3941801	chr6:3941281-3941801	7	+	3941281	3941281	16724991	1	520,	0,
#Partially deleted in new
chr6	3978061	3979099	chr6:3978061-3979099	7	+	3978061	3978061	16724991	1	1038,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	3982672	3984130	chr6:3982672-3984130	3	+	3982672	3982672	8553170	1	1458,	0,
#Deleted in new
chr6	4018712	4019202	chr6:4018712-4019202	3	+	4018712	4018712	8553170	1	490,	0,
#Partially deleted in new
chr6	4018842	4021215	chr6:4018842-4021215	3	-	4018842	4018842	8553170	2	37,172,	0,2201,
#Partially deleted in new
chr6	4021266	4064982	chr6:4021266-4064982	0	+	4021425	4060616	0	16	200,1197,174,156,82,211,74,91,148,138,154,115,152,87,1887,1909,	0,10292,16130,19505,21220,22546,25908,27749,28465,30690,31453,35054,35769,37461,39146,41807,
#Partially deleted in new
chr6	4021325	4061907	chr6:4021325-4061907	3	+	4021425	4060616	0	15	141,1197,174,156,82,211,74,91,148,138,154,115,152,87,1495,	0,10233,16071,19446,21161,22487,25849,27690,28406,30631,31394,34995,35710,37402,39087,
#Partially deleted in new
chr6	4037418	4064983	chr6:4037418-4064983	0	+	4037418	4060616	789624	19	152,156,82,211,74,91,148,138,154,115,152,87,232,133,46,87,77,46,183,	0,3353,5068,6394,9756,11597,12313,14538,15301,18902,19617,21309,22994,23596,24236,24794,25138,25655,27382,
#Partially deleted in new
chr6	4040847	4044226	chr6:4040847-4044226	0	+	4040847	4040847	8553170	3	80,82,414,	0,1639,2965,
#Partially deleted in new
chr6	4040848	4064983	chr6:4040848-4064983	0	+	4040848	4040848	8553170	17	79,82,211,74,91,148,138,154,115,162,152,87,735,46,87,46,183,	0,1638,2964,6326,8167,8883,11108,11871,15472,15678,16187,17879,19564,20806,21364,22225,23952,
#Partially deleted in new
chr6	4049433	4050518	chr6:4049433-4050518	0	-	4049433	4049433	8553170	2	182,90,	0,995,
#Partially deleted in new
chr6	4050460	4087332	chr6:4050460-4087332	0	-	4050460	4050460	8553170	3	91,68,323,	0,22814,36549,
#Partially deleted in new
chr6	4051981	4058890	chr6:4051981-4058890	0	+	4051981	4051981	8553170	4	113,154,867,163,	0,738,4339,6746,
#Partially deleted in new
chr6	4057159	4063556	chr6:4057159-4063556	0	+	4057159	4057159	8553170	7	28,87,274,133,645,77,483,	0,1568,3253,3855,4495,5397,5914,
#Deleted in new
chr6	4060981	4062069	chr6:4060981-4062069	0	+	4060981	4060981	8553170	2	166,415,	0,673,
#Deleted in new
chr6	4062103	4064983	chr6:4062103-4064983	0	+	4062103	4062103	8553170	4	196,204,46,183,	0,453,970,2697,
#Partially deleted in new
chr6	4068361	4079221	chr6:4068361-4079221	3	-	4068695	4077414	789624	7	1559,68,75,14,85,94,370,	0,4913,5071,6081,6215,8993,10490,
#Partially deleted in new
chr6	4068366	4087344	chr6:4068366-4087344	0	-	4068366	4068366	8553170	5	1554,68,75,233,335,	0,4908,5066,16211,18643,
#Partially deleted in new
chr6	4068695	4087027	chr6:4068695-4087027	1	-	4068695	4087027	789624	9	1225,68,75,14,85,94,117,233,18,	0,4579,4737,5747,5881,8659,10156,15882,18314,
#Partially deleted in new
chr6	4069890	4079134	chr6:4069890-4079134	0	-	4069890	4073477	789624	5	30,68,75,14,283,	0,3384,3542,4552,8961,
#Partially deleted in new
chr6	4073291	4079100	chr6:4073291-4079100	0	-	4073291	4073477	789624	5	51,75,14,85,249,	0,141,1151,1285,5560,
#Partially deleted in new
chr6	4073457	4079221	chr6:4073457-4079221	0	-	4073457	4073457	8553170	4	50,85,94,370,	0,1119,3897,5394,
#Partially deleted in new
chr6	4079205	4130764	chr6:4079205-4130764	3	+	4087641	4130182	789624	6	475,378,199,98,220,280,	0,8143,19794,42743,50936,51279,
#Partially deleted in new
chr6	4079208	4130951	chr6:4079208-4130951	0	+	4079208	4079208	8553170	6	472,378,199,98,220,467,	0,8140,19791,42740,50933,51276,
#Partially deleted in new
chr6	4079216	4130765	chr6:4079216-4130765	0	+	4079216	4079216	789624	6	464,199,98,1141,220,281,	0,19783,42732,45762,50925,51268,
#Partially deleted in new
chr6	4087396	4101361	chr6:4087396-4101361	0	+	4087396	4087396	8553170	3	330,199,51,	0,11603,13914,
#Partially deleted in new
chr6	4087423	4130282	chr6:4087423-4130282	0	+	4087423	4087423	8553170	5	303,199,98,208,141,	0,11576,34525,38488,42718,
#Partially deleted in new
chr6	4087438	4115570	chr6:4087438-4115570	0	+	4087438	4087438	8553170	3	288,199,117,	0,11561,28015,
#Partially deleted in new
chr6	4087438	4130758	chr6:4087438-4130758	0	+	4087438	4087438	789624	7	288,199,257,98,1160,220,274,	0,11561,27968,34510,37521,42703,43046,
#Partially deleted in new
chr6	4087533	4122032	chr6:4087533-4122032	4	+	4087533	4087533	16724991	4	193,199,223,84,	0,11466,27907,34415,
#Partially deleted in new
chr6	4115688	4135597	chr6:4115688-4135597	1	-	4115873	4135560	0	10	341,144,90,121,103,70,189,99,163,87,	0,1619,3497,9561,10446,12073,14683,15078,17860,19822,
#Partially deleted in new
chr6	4115692	4135468	chr6:4115692-4135468	1	-	4115873	4133671	789624	10	337,144,90,121,103,70,189,99,153,99,	0,1615,3493,9557,10442,12069,14679,15074,17856,19677,
#Partially deleted in new
chr6	4115699	4135591	chr6:4115699-4135591	0	-	4130237	4133671	789624	11	330,144,90,121,103,70,71,189,99,153,81,	0,1608,3486,9550,10435,12062,14479,14672,15067,17849,19811,
#Partially deleted in new
chr6	4115701	4135590	chr6:4115701-4135590	0	-	4130495	4135560	789624	10	328,144,90,121,103,70,271,99,163,80,	0,1606,3484,9548,10433,12060,14670,15065,17847,19809,
#Partially deleted in new
chr6	4115705	4135597	chr6:4115705-4135597	3	-	4115873	4133671	789624	10	324,144,90,121,103,70,189,99,153,87,	0,1602,3480,9544,10429,12056,14666,15061,17843,19805,
#Partially deleted in new
chr6	4115705	4135575	chr6:4115705-4135575	0	-	4115705	4115705	8553170	9	324,144,90,988,70,189,99,153,65,	0,1602,3480,9544,12056,14666,15061,17843,19805,
#Partially deleted in new
chr6	4115705	4135564	chr6:4115705-4135564	0	-	4119252	4135560	789624	8	324,144,90,70,189,99,163,54,	0,1602,3480,12056,14666,15061,17843,19805,
#Partially deleted in new
chr6	4115706	4135557	chr6:4115706-4135557	1	-	4115873	4133671	789624	10	323,144,90,121,103,70,189,99,163,246,	0,1601,3479,9543,10428,12055,14665,15060,17842,19605,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	4115707	4133782	chr6:4115707-4133782	0	-	4115707	4115707	8553170	7	322,1968,988,70,189,99,234,	0,1600,9542,12054,14664,15059,17841,
#Partially deleted in new
chr6	4121931	4130335	chr6:4121931-4130335	0	+	4121931	4121931	8553170	2	115,194,	0,8210,
#Partially deleted in new
chr6	4127813	4135459	chr6:4127813-4135459	0	-	4127813	4135305	789624	5	18,189,99,163,345,	0,2558,2953,5735,7301,
#Partially deleted in new
chr6	4130317	4135573	chr6:4130317-4135573	0	-	4130317	4130317	8553170	4	243,99,153,63,	0,449,3231,5193,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	4135422	4146053	chr6:4135422-4146053	3	+	4135422	4135422	8553170	2	123,517,	0,10114,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	4136071	4157385	chr6:4136071-4157385	3	+	4136071	4136071	789624	4	177,42,153,1905,	0,1289,18769,19409,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	4186623	4188109	chr6:4186623-4188109	3	-	4186623	4186623	8553170	2	146,120,	0,1366,
#Deleted in new
chr6	4189115	4189806	chr6:4189115-4189806	7	+	4189115	4189115	16724991	1	691,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	4304941	4583871	chr6:4304941-4583871	3	-	4304941	4304941	8553170	5	3027,569,80,165,148,	0,123441,126454,276697,278782,
#Partially deleted in new
chr6	4345742	4347037	chr6:4345742-4347037	3	-	4345742	4345742	8553170	3	64,237,28,	0,890,1267,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	4449391	4468181	chr6:4449391-4468181	3	+	4449391	4449391	8553170	3	159,271,1375,	0,16942,17415,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	4491806	4495769	chr6:4491806-4495769	3	+	4491806	4491806	8553170	2	384,1888,	0,2075,
#Deleted in new
chr6	4529721	4530008	chr6:4529721-4530008	7	+	4529721	4529721	16724991	1	287,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	4599286	4602420	chr6:4599286-4602420	3	-	4599286	4599286	8553170	2	329,244,	0,2890,
#Deleted in new
chr6	4610611	4611919	chr6:4610611-4611919	3	+	4610611	4610611	789624	2	201,942,	0,366,
#Deleted in new
chr6	4702462	4703779	chr6:4702462-4703779	7	+	4702462	4702462	16724991	1	1317,	0,
#Partially deleted in new
chr6	4706158	4955547	chr6:4706158-4955547	1	+	4715778	4954056	0	9	93,141,83,667,257,173,211,144,1650,	0,9582,28603,185554,229356,231406,237387,246107,247739,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	4714097	4724885	chr6:4714097-4724885	3	-	4714097	4714097	8553170	3	811,68,475,	0,4429,10313,
#Partially deleted in new
chr6	4715840	4892112	chr6:4715840-4892112	0	+	4715840	4715840	8553170	4	41,90,83,400,	0,17318,18921,175872,
#Partially deleted in new
chr6	4772970	4943597	chr6:4772970-4943597	0	+	4773147	4943597	789624	4	208,257,173,52,	0,162544,164594,170575,
#Partially deleted in new
chr6	4773040	4892347	chr6:4773040-4892347	0	+	4773040	4773040	8553170	2	138,635,	0,118672,
#Deleted in new
chr6	4774525	4775408	chr6:4774525-4775408	3	-	4774525	4774525	8553170	2	232,137,	0,746,
#Partially deleted in new
chr6	4776434	4954256	chr6:4776434-4954256	3	+	4776783	4954056	0	7	373,667,257,173,211,144,359,	0,115278,159080,161130,167111,175831,177463,
#Partially deleted in new
chr6	4776441	4954510	chr6:4776441-4954510	0	+	4776441	4776441	8553170	6	366,257,173,211,144,613,	0,159073,161123,167104,175824,177456,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	4836097	4954373	chr6:4836097-4954373	1	+	4892084	4954056	0	7	211,667,257,173,211,144,476,	0,55615,99417,101467,107448,116168,117800,
#Partially deleted in new
chr6	4889991	4955551	chr6:4889991-4955551	1	+	4892084	4954056	0	7	135,667,257,173,211,144,1654,	0,1721,45523,47573,53554,62274,63906,
#Partially deleted in new
chr6	4928694	4943813	chr6:4928694-4943813	0	+	4928694	4928694	8553170	4	34,257,173,268,	0,6820,8870,14851,
#Deleted in new
chr6	4979071	4979494	chr6:4979071-4979494	7	+	4979071	4979071	16724991	1	423,	0,
#Partially deleted in new
chr6	4994731	5004047	chr6:4994731-5004047	3	-	4995077	5004002	789624	8	545,135,199,126,96,69,145,168,	0,1219,1490,3984,5077,5831,7369,9148,
#Partially deleted in new
chr6	4995046	5004036	chr6:4995046-5004036	1	-	4995077	5004002	789624	7	230,135,199,126,96,145,157,	0,904,1175,3669,4762,7054,8833,
#Partially deleted in new
chr6	4995048	5004063	chr6:4995048-5004063	1	-	4995077	5004002	789624	7	228,135,199,96,69,145,184,	0,902,1173,4760,5514,7052,8831,
#Partially deleted in new
chr6	4995077	5003658	chr6:4995077-5003658	1	-	4995077	5002188	789624	8	199,135,199,126,96,69,145,73,	0,873,1144,3638,4731,5485,7023,8508,
#Partially deleted in new
chr6	4998687	5004047	chr6:4998687-5004047	0	-	4998687	4998687	8553170	5	154,96,69,145,168,	0,1121,1875,3413,5192,
#Partially deleted in new
chr6	4998827	5004018	chr6:4998827-5004018	0	-	5000594	5004002	789624	6	14,96,69,37,145,139,	0,981,1735,2266,3273,5052,
#Partially deleted in new
chr6	5001775	5004063	chr6:5001775-5004063	0	-	5001775	5001775	8553170	2	470,184,	0,2104,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	5029971	5043449	chr6:5029971-5043449	3	+	5029971	5029971	789624	2	224,862,	0,12616,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	5030030	5042940	chr6:5030030-5042940	0	+	5030030	5030030	8553170	2	165,435,	0,12475,
#Deleted in new
chr6	5030075	5031125	chr6:5030075-5031125	0	+	5030075	5030075	8553170	2	120,321,	0,729,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	5031755	5054423	chr6:5031755-5054423	3	-	5031755	5031755	8553170	2	2927,346,	0,22322,
#Partially deleted in new
chr6	5065794	5066982	chr6:5065794-5066982	7	-	5065794	5065794	16724991	1	1188,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	5084580	5089487	chr6:5084580-5089487	3	+	5085485	5086562	789624	1	4907,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	5102592	5260939	chr6:5102592-5260939	3	-	5109422	5260733	0	3	6899,121,292,	0,114025,158055,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	5103628	5109234	chr6:5103628-5109234	0	-	5103628	5103628	8553170	2	322,683,	0,4923,
#Partially deleted in new
chr6	5108418	5260742	chr6:5108418-5260742	1	-	5109454	5260733	789624	2	1073,95,	0,152229,
#Partially deleted in new
chr6	5108422	5260733	chr6:5108422-5260733	1	-	5144178	5260733	789624	4	1069,125,121,86,	0,35715,108195,152225,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	5108472	5216738	chr6:5108472-5216738	0	-	5113315	5216738	789624	3	1019,347,121,	0,4598,108145,
#Partially deleted in new
chr6	5108727	5132894	chr6:5108727-5132894	0	-	5108727	5108727	8553170	2	764,177,	0,23990,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	5136173	5260742	chr6:5136173-5260742	1	-	5138733	5260733	789624	4	693,32,121,95,	0,2534,80444,124474,
#Deleted in new
chr6	5148232	5148322	chr6:5148232-5148322	3	-	5148232	5148232	789624	1	90,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	5186599	5260737	chr6:5186599-5260737	1	-	5186794	5260733	789624	3	381,121,90,	0,30018,74048,
#Partially deleted in new
chr6	5261043	5771429	chr6:5261043-5771429	3	+	5368570	5771429	0	7	315,633,160,132,161,152,139,	0,107506,143498,169997,284136,352125,510247,
#Partially deleted in new
chr6	5261325	5368712	chr6:5261325-5368712	0	+	5368570	5368712	789624	3	335,64,163,	0,11100,107224,
#Partially deleted in new
chr6	5261498	5829192	chr6:5261498-5829192	0	+	5368570	5821792	8553170	9	162,633,160,132,161,152,158,277,2049,	0,107051,143043,169542,283681,351670,560209,560529,565645,
#Partially deleted in new
chr6	5261525	5771580	chr6:5261525-5771580	1	+	5368570	5771429	0	7	135,633,160,132,161,152,290,	0,107024,143016,169515,283654,351643,509765,
#Partially deleted in new
chr6	5291029	5291388	chr6:5291029-5291388	7	-	5291029	5291029	16724991	1	359,	0,
#Partially deleted in new
chr6	5404541	5431810	chr6:5404541-5431810	0	+	5404541	5431682	789624	3	160,132,142,	0,26499,27127,
#Partially deleted in new
chr6	5451682	5458033	chr6:5451682-5458033	3	-	5451682	5451682	789624	3	1075,76,140,	0,5270,6211,
#Partially deleted in new
chr6	5452467	5458075	chr6:5452467-5458075	0	-	5452467	5452467	789624	2	290,182,	0,5426,
#Deleted in new
chr6	5609226	5610195	chr6:5609226-5610195	7	-	5609226	5609226	16724991	1	969,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	5664984	5695272	chr6:5664984-5695272	3	-	5664984	5664984	789624	4	474,77,127,128,	0,3052,29897,30160,
#Deleted in new
chr6	5788345	5788699	chr6:5788345-5788699	7	-	5788345	5788345	16724991	1	354,	0,
#Deleted in new
chr6	5817420	5818366	chr6:5817420-5818366	7	-	5817420	5817420	16724991	1	946,	0,
#Partially deleted in new
chr6	5851505	5870220	chr6:5851505-5870220	3	+	5851505	5851505	8553170	3	157,74,180,	0,557,18535,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	5918563	5918844	chr6:5918563-5918844	3	-	5918563	5918563	8553170	1	281,	0,
#Deleted in new
chr6	5972411	5974012	chr6:5972411-5974012	7	+	5972411	5972411	16724991	1	1601,	0,
#Deleted in new
chr6	5997998	6006967	chr6:5997998-6006967	1	-	5998975	6006749	789624	3	1206,145,273,	0,4354,8696,
#Deleted in new
chr6	5998001	6007605	chr6:5998001-6007605	3	-	5998975	6006749	789624	4	1203,145,89,119,	0,4351,8693,9485,
#Deleted in new
chr6	5998001	6004044	chr6:5998001-6004044	1	-	5998975	6003730	789624	4	1203,145,105,342,	0,4351,5167,5701,
#Deleted in new
chr6	5998714	6002963	chr6:5998714-6002963	0	-	5998714	5998714	8553170	3	490,145,138,	0,3638,4111,
#Partially deleted in new
chr6	6144084	6320834	chr6:6144084-6320834	3	-	6145618	6318664	789624	15	1688,137,161,288,154,89,104,139,175,108,119,252,189,148,248,	0,7728,23373,30495,37903,51712,53138,77948,80601,104227,106726,122473,161266,174450,176502,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	6169303	6169435	chr6:6169303-6169435	3	-	6169303	6169303	5263520	1	132,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	6169333	6169409	chr6:6169333-6169409	3	+	6169333	6169333	5263520	1	76,	0,
#Partially deleted in new
chr6	6206410	6224808	chr6:6206410-6224808	0	-	6206556	6224808	789624	3	192,139,123,	0,15622,18275,
#Partially deleted in new
chr6	6250906	6305654	chr6:6250906-6305654	0	-	6250906	6250906	8553170	3	23,252,304,	0,15651,54444,
#Partially deleted in new
chr6	6266712	6321013	chr6:6266712-6321013	0	-	6266712	6318664	789624	5	97,189,148,73,75,	0,38638,51822,53874,54226,
#Partially deleted in new
chr6	6266733	6320905	chr6:6266733-6320905	0	-	6266733	6320870	789624	5	76,189,148,73,106,	0,38617,51801,53853,54066,
#Partially deleted in new
chr6	6305112	6320642	chr6:6305112-6320642	0	-	6305300	6320642	789624	3	427,148,56,	0,13422,15474,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	6346464	6622744	chr6:6346464-6622744	3	-	6346464	6346464	789624	8	956,140,255,154,157,94,72,113,	0,2146,19890,22537,92111,217830,222953,276167,
#Deleted in new
chr6	6347080	6347381	chr6:6347080-6347381	7	-	6347080	6347080	16724991	1	301,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	6360590	6622695	chr6:6360590-6622695	1	-	6360590	6360590	8553170	7	1771,255,154,157,94,324,64,	0,5764,8411,77985,203704,230565,262041,
#Partially deleted in new
chr6	6366131	6587193	chr6:6366131-6587193	1	-	6366131	6366131	8553170	4	478,154,157,149,	0,2870,72444,220913,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	6450355	6507443	chr6:6450355-6507443	3	+	6450355	6450355	8553170	4	202,79,152,2088,	0,38520,54180,55000,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	6475305	6492984	chr6:6475305-6492984	0	-	6475305	6475305	8553170	2	453,92,	0,17587,
#Deleted in new
chr6	6534696	6535631	chr6:6534696-6535631	7	+	6534696	6534696	16724991	1	935,	0,
#Partially deleted in new
chr6	6588107	6654983	chr6:6588107-6654983	3	+	6588734	6654627	0	6	343,145,87,129,53,440,	0,618,36818,38185,61517,66436,
#Partially deleted in new
chr6	6588668	6654631	chr6:6588668-6654631	1	+	6588734	6654627	0	5	202,87,129,53,88,	0,36257,37624,60956,65875,
#Partially deleted in new
chr6	6620846	6622771	chr6:6620846-6622771	1	-	6620846	6620846	8553170	2	537,140,	0,1785,
#Partially deleted in new
chr6	6620963	6622697	chr6:6620963-6622697	0	-	6620963	6620963	8553170	2	506,66,	0,1668,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	6680308	6683633	chr6:6680308-6683633	3	-	6680308	6680308	8553170	1	3325,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	6685147	6686984	chr6:6685147-6686984	3	+	6685147	6685147	8553170	1	1837,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	6692743	6711002	chr6:6692743-6711002	1	-	6692743	6692743	8553170	2	437,131,	0,18128,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	6704670	6739030	chr6:6704670-6739030	3	-	6704670	6704670	8553170	4	408,188,162,122,	0,6201,7026,34238,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	6758275	6759291	chr6:6758275-6759291	3	-	6758275	6758275	8553170	2	169,337,	0,679,
#Deleted in new
chr6	6794914	6795402	chr6:6794914-6795402	7	-	6794914	6794914	16724991	1	488,	0,
#Partially deleted in new
chr6	6901021	6918715	chr6:6901021-6918715	3	-	6901021	6901021	8553170	2	727,206,	0,17488,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	6938605	6938897	chr6:6938605-6938897	3	-	6938605	6938605	8553170	1	292,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	6993190	6995554	chr6:6993190-6995554	3	+	6993190	6993190	8553170	3	182,104,231,	0,1859,2133,
#Partially deleted in new
chr6	7107596	7249274	chr6:7107596-7249274	1	+	7181911	7248968	789624	12	172,119,123,213,90,164,145,137,190,2911,798,764,	0,69058,73527,74273,79837,81562,103207,103976,118870,121400,138827,140914,
#Partially deleted in new
chr6	7107798	7189306	chr6:7107798-7189306	0	+	7181911	7189306	789624	6	262,119,166,213,90,148,	0,68856,73325,74071,79635,81360,
#Partially deleted in new
chr6	7107807	7251980	chr6:7107807-7251980	3	+	7181911	7248968	789624	13	253,119,123,213,90,164,145,137,190,2911,165,798,3470,	0,68847,73316,74062,79626,81351,102996,103765,118659,121189,132630,138616,140703,
#Partially deleted in new
chr6	7107820	7210871	chr6:7107820-7210871	0	+	7181911	7210871	789624	7	244,119,123,213,90,164,68,	0,68834,73303,74049,79613,81338,102983,
#Partially deleted in new
chr6	7108025	7181923	chr6:7108025-7181923	0	+	7181911	7181923	8553170	4	35,119,35,54,	0,68629,73098,73844,
#Partially deleted in new
chr6	7108030	7250012	chr6:7108030-7250012	1	+	7181911	7248968	789624	12	30,119,123,213,90,164,145,137,190,2911,165,1502,	0,68624,73093,73839,79403,81128,102773,103542,118436,120966,132407,140480,
#Partially deleted in new
chr6	7108030	7251030	chr6:7108030-7251030	1	+	7181911	7248968	789624	12	30,119,123,213,90,164,145,137,190,2911,798,2520,	0,68624,73093,73839,79403,81128,102773,103542,118436,120966,138393,140480,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	7108631	7219091	chr6:7108631-7219091	0	+	7108631	7108631	8553170	7	71,119,959,90,164,145,7519,	0,68023,72492,78802,80527,102172,102941,
#Partially deleted in new
chr6	7139244	7230433	chr6:7139244-7230433	0	+	7181911	7230433	789624	11	54,161,119,123,213,90,164,145,137,190,1437,	0,1403,37410,41879,42625,48189,49914,71559,72328,87222,89752,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	7183082	7185287	chr6:7183082-7185287	3	+	7183082	7183082	8553170	2	896,780,	0,1425,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	7187581	7187686	chr6:7187581-7187686	3	-	7187581	7187581	8553170	1	105,	0,
#Partially deleted in new
chr6	7230641	7250012	chr6:7230641-7250012	1	+	7230892	7248968	789624	5	1266,242,93,460,1502,	0,15782,16026,16120,17869,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	7258909	7261993	chr6:7258909-7261993	3	-	7258909	7258909	8553170	2	947,238,	0,2846,
#Partially deleted in new
chr6	7268305	7313207	chr6:7268305-7313207	1	-	7269129	7313120	789624	10	849,64,15,94,79,77,263,88,113,166,	0,21562,26782,27086,29617,30441,33004,35244,41611,44736,
#Partially deleted in new
chr6	7268532	7313220	chr6:7268532-7313220	1	-	7287912	7313120	8553170	10	622,61,64,94,79,77,263,88,113,179,	0,19329,21335,26859,29390,30214,32777,35017,41384,44509,
#Partially deleted in new
chr6	7268937	7289850	chr6:7268937-7289850	0	-	7268937	7268937	8553170	3	217,61,168,	0,18924,20745,
#Partially deleted in new
chr6	7276030	7298872	chr6:7276030-7298872	3	+	7276030	7276030	8553170	3	138,74,288,	0,9792,22554,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	7281142	7313207	chr6:7281142-7313207	3	-	7289863	7313120	789624	8	8789,94,79,77,263,88,113,166,	0,14249,16780,17604,20167,22407,28774,31899,
#Partially deleted in new
chr6	7287569	7313198	chr6:7287569-7313198	1	-	7289863	7313120	789624	9	2362,15,94,79,77,263,88,113,157,	0,7518,7822,10353,11177,13740,15980,22347,25472,
#Partially deleted in new
chr6	7288681	7313174	chr6:7288681-7313174	1	-	7289863	7313120	789624	8	1250,94,79,77,59,88,113,133,	0,6710,9241,10065,12628,14868,21235,24360,
#Partially deleted in new
chr6	7289675	7313182	chr6:7289675-7313182	1	-	7289930	7313120	789624	8	256,101,79,77,263,88,113,141,	0,5709,8247,9071,11634,13874,20241,23366,
#Partially deleted in new
chr6	7295055	7301363	chr6:7295055-7301363	0	-	7295383	7301363	789624	4	430,79,77,54,	0,2867,3691,6254,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	7296882	7313188	chr6:7296882-7313188	1	-	7297110	7313120	789624	7	327,79,77,263,88,113,147,	0,1040,1864,4427,6667,13034,16159,
#Partially deleted in new
chr6	7301389	7313231	chr6:7301389-7313231	0	-	7301389	7301389	8553170	4	183,84,113,190,	0,2160,8527,11652,
#Partially deleted in new
chr6	7326655	7389390	chr6:7326655-7389390	0	-	7365612	7387173	789624	14	244,40,69,71,105,163,81,111,147,1059,404,88,218,189,	0,3193,7366,28385,29369,38812,39148,42032,43263,46417,51961,59129,60323,62546,
#Partially deleted in new
chr6	7326658	7389402	chr6:7326658-7389402	1	-	7326857	7387173	789624	14	241,40,69,71,105,108,81,45,147,1059,404,88,218,201,	0,3190,7363,28382,29366,38809,39145,42095,43260,46414,51958,59126,60320,62543,
#Partially deleted in new
chr6	7326658	7389743	chr6:7326658-7389743	1	-	7326857	7387173	789624	14	241,40,69,71,105,108,81,111,147,1059,404,88,218,542,	0,3190,7363,28382,29366,38809,39145,42029,43260,46414,51958,59126,60320,62543,
#Partially deleted in new
chr6	7326683	7389709	chr6:7326683-7389709	3	-	7326857	7378895	789624	11	216,40,69,71,108,111,147,1059,404,88,508,	0,3165,7338,28357,38784,42004,43235,46389,51933,59101,62518,
#Partially deleted in new
chr6	7326741	7389400	chr6:7326741-7389400	0	-	7374084	7387173	789624	14	158,40,69,71,105,108,81,111,147,1059,399,88,197,199,	0,3107,7280,28299,29283,38726,39062,41946,43177,46331,51880,59043,60237,62460,
#Partially deleted in new
chr6	7326857	7389402	chr6:7326857-7389402	1	-	7326857	7387173	789624	12	42,40,69,71,108,111,147,1059,404,88,197,201,	0,2991,7164,28183,38610,41830,43061,46215,51759,58927,60121,62344,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	7329096	7389406	chr6:7329096-7389406	1	-	7329164	7387173	789624	13	170,40,69,71,108,81,111,147,1059,404,88,218,205,	0,752,4925,25944,36371,36707,39591,40822,43976,49520,56688,57882,60105,
#Deleted in new
chr6	7331285	7331676	chr6:7331285-7331676	7	-	7331285	7331285	16724991	1	391,	0,
#Deleted in new
chr6	7338838	7339568	chr6:7338838-7339568	7	-	7338838	7338838	16724991	1	730,	0,
#Partially deleted in new
chr6	7340853	7342056	chr6:7340853-7342056	7	-	7340853	7340853	16724991	1	1203,	0,
#Partially deleted in new
chr6	7373180	7389402	chr6:7373180-7389402	0	-	7373180	7389295	789624	5	951,404,88,218,120,	0,5436,12604,13798,16102,
#Partially deleted in new
chr6	7373952	7389402	chr6:7373952-7389402	0	-	7373952	7373952	8553170	4	179,88,218,201,	0,11832,13026,15249,
#Partially deleted in new
chr6	7389495	7418037	chr6:7389495-7418037	3	+	7390002	7417441	0	17	578,205,91,70,43,93,113,81,87,138,104,107,66,120,54,153,707,	0,3603,5557,7207,9202,11462,13107,13321,14445,14922,15422,15753,20890,21836,23393,24742,27835,
#Partially deleted in new
chr6	7389792	7402848	chr6:7389792-7402848	0	+	7390002	7395032	789624	8	281,205,123,70,43,93,113,32,	0,3306,5228,6910,8905,11165,12810,13024,
#Partially deleted in new
chr6	7396751	7418037	chr6:7396751-7418037	0	+	7396751	7396751	8553170	13	21,43,93,295,87,138,104,107,66,120,54,153,707,	0,1946,4206,5851,7189,7666,8166,8497,13634,14580,16137,17486,20579,
#Deleted in new
chr6	7403933	7405184	chr6:7403933-7405184	0	+	7403933	7403933	8553170	3	94,138,267,	0,484,984,
#Deleted in new
chr6	7410377	7411567	chr6:7410377-7411567	0	+	7410377	7410377	8553170	2	74,236,	0,954,
#Deleted in new
chr6	7481093	7482594	chr6:7481093-7482594	7	-	7481093	7481093	16724991	1	1501,	0,
#Deleted in new
chr6	7506202	7506549	chr6:7506202-7506549	7	+	7506202	7506202	16724991	1	347,	0,
#Deleted in new
chr6	7516599	7517840	chr6:7516599-7517840	7	-	7516599	7516599	16724991	1	1241,	0,
#Deleted in new
chr6	7540450	7541338	chr6:7540450-7541338	3	-	7540450	7540450	8553170	1	888,	0,
#Partially deleted in new
chr6	7541574	7586717	chr6:7541574-7586717	3	+	7541915	7585878	0	24	511,103,149,175,129,51,162,105,96,126,153,155,127,202,227,167,139,194,163,84,108,99,2295,4076,	0,14143,16541,17651,21077,22161,23784,24802,25779,26206,26862,27611,28862,29808,30267,32511,33082,33720,34719,35384,36204,36889,37700,41067,
#Partially deleted in new
chr6	7541616	7586572	chr6:7541616-7586572	1	+	7541915	7585878	0	24	469,103,149,175,129,51,162,105,96,126,153,155,127,202,227,167,139,194,163,84,108,99,498,3931,	0,14101,16499,17609,21035,22119,23742,24760,25737,26164,26820,27569,28820,29766,30225,32469,33040,33678,34677,35342,36162,36847,37658,41025,
#Partially deleted in new
chr6	7559285	7565817	chr6:7559285-7565817	0	+	7559285	7559285	8553170	4	115,129,51,459,	0,3366,4450,6073,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	7590198	7611967	chr6:7590198-7611967	3	+	7590257	7608873	0	9	215,114,61,75,189,122,89,165,3143,	0,3535,3900,4828,11137,12424,15199,15832,18626,
#Partially deleted in new
chr6	7590225	7605421	chr6:7590225-7605421	0	+	7590257	7601371	789624	8	188,114,61,75,8,189,122,24,	0,3508,3873,4801,9447,11110,12397,15172,
#Partially deleted in new
chr6	7599672	7609206	chr6:7599672-7609206	0	+	7599672	7599672	8553170	5	1852,122,89,165,382,	0,2950,5725,6358,9152,
#Deleted in new
chr6	7620421	7620878	chr6:7620421-7620878	7	+	7620421	7620421	16724991	1	457,	0,
#Partially deleted in new
chr6	7726796	7881422	chr6:7726796-7881422	3	+	7726955	7880343	0	7	823,193,149,198,77,111,1229,	0,118343,134654,135504,152277,153194,153397,
#Partially deleted in new
chr6	7881516	7910814	chr6:7881516-7910814	3	-	7883143	7910776	0	10	1750,130,83,144,87,116,97,106,150,301,	0,2842,4444,7188,7978,10104,13589,18059,23057,28997,
#Deleted in new
chr6	7881516	7889445	chr6:7881516-7889445	0	-	7881516	7881516	8553170	4	1750,130,83,741,	0,2842,4444,7188,
#Partially deleted in new
chr6	7881521	8064364	chr6:7881521-8064364	3	-	7904684	8064364	789624	13	1745,130,83,144,87,116,97,106,150,59,130,83,100,	0,2837,4439,7183,7973,10099,13584,18054,23052,144845,159617,181012,182743,
#Partially deleted in new
chr6	7883143	7910077	chr6:7883143-7910077	1	-	7883143	7904662	0	10	123,130,83,144,87,116,97,106,150,265,	0,1215,2817,5561,6351,8477,11962,16432,21430,26669,
#Deleted in new
chr6	7883154	7888961	chr6:7883154-7888961	0	-	7883154	7883154	8553170	4	112,130,83,257,	0,1204,2806,5550,
#Partially deleted in new
chr6	7895154	7900242	chr6:7895154-7900242	0	-	7895154	7895154	8553170	2	48,667,	0,4421,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	7938429	7939322	chr6:7938429-7939322	7	-	7938429	7938429	16724991	1	893,	0,
#Deleted in new
chr6	7986536	7988192	chr6:7986536-7988192	7	+	7986536	7986536	16724991	1	1656,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	8013566	8064414	chr6:8013566-8064414	3	-	8015648	8064376	789624	5	2262,59,130,83,150,	0,12800,27572,48967,50698,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	8013977	8064393	chr6:8013977-8064393	0	-	8027379	8064376	789624	6	1851,59,193,130,83,129,	0,12389,13229,27161,48556,50287,
#Partially deleted in new
chr6	8015062	8064396	chr6:8015062-8064396	0	-	8054360	8064376	789624	6	766,59,130,103,83,132,	0,11304,26076,39207,47471,49202,
#Partially deleted in new
chr6	8015084	8018059	chr6:8015084-8018059	0	-	8015084	8015084	8553170	2	744,273,	0,2702,
#Partially deleted in new
chr6	8015723	8064385	chr6:8015723-8064385	1	-	8015809	8064376	789624	4	105,59,83,121,	0,10643,46810,48541,
#Partially deleted in new
chr6	8015725	8102530	chr6:8015725-8102530	3	-	8062544	8102521	789624	7	103,59,130,83,96,201,96,	0,10641,25413,46808,74460,81541,86709,
#Partially deleted in new
chr6	8073359	8102548	chr6:8073359-8102548	1	-	8073474	8102521	0	4	151,96,201,114,	0,16826,23907,29075,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	8078493	8102481	chr6:8078493-8102481	0	-	8078674	8102481	789624	4	247,96,201,47,	0,11692,18773,23941,
#Partially deleted in new
chr6	8079394	8102578	chr6:8079394-8102578	3	-	8079889	8102521	0	4	636,96,201,144,	0,10791,17872,23040,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	8089953	8102559	chr6:8089953-8102559	1	-	8090116	8102521	789624	3	328,201,125,	0,7313,12481,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	8089984	8097311	chr6:8089984-8097311	0	-	8090273	8097311	789624	3	297,118,45,	0,5393,7282,
#Partially deleted in new
chr6	8097306	8102046	chr6:8097306-8102046	0	-	8097306	8101887	789624	2	161,282,	0,4458,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	8102710	8342878	chr6:8102710-8342878	0	+	8102710	8102710	8553170	5	142,86,172,108,554,	0,136220,157856,204742,239614,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	8102736	8343139	chr6:8102736-8343139	1	+	8102736	8102736	8553170	6	116,90,86,185,108,815,	0,43773,136194,200197,204716,239588,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	8102736	8116293	chr6:8102736-8116293	0	+	8102736	8102736	8553170	2	116,693,	0,12864,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	8102763	8342455	chr6:8102763-8342455	0	+	8102763	8102763	8553170	6	89,90,86,108,106,131,	0,43746,136167,204689,220767,239561,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	8158161	8760447	chr6:8158161-8760447	3	+	8158161	8158161	8553170	9	99,107,160,86,108,69,59,107,71,	0,9652,71952,80769,149291,279801,400423,596624,602215,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	8165511	8182862	chr6:8165511-8182862	0	+	8165511	8165511	8553170	3	847,107,43,	0,2302,17308,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	8195575	8342495	chr6:8195575-8342495	0	+	8195575	8195575	8553170	7	60,160,86,108,273,269,171,	0,34538,43355,111877,132429,134079,146749,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	8277526	8328277	chr6:8277526-8328277	0	+	8277526	8277526	8553170	4	78,108,106,273,	0,29926,46004,50478,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	8283189	8342455	chr6:8283189-8342455	2	+	8283189	8283189	8553170	5	49,179,72,108,131,	0,139,1261,24263,59135,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	8283224	8342455	chr6:8283224-8342455	0	+	8283224	8283224	8553170	5	283,72,108,273,131,	0,1226,24228,44780,59100,
#Deleted in new
chr6	8341936	8343021	chr6:8341936-8343021	3	-	8341936	8341936	8553170	2	712,34,	0,1051,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	8411462	8435537	chr6:8411462-8435537	0	-	8418813	8430064	8553170	12	238,815,70,112,93,142,98,108,155,122,294,195,	0,1422,3445,5421,5939,7281,8117,9258,11007,16474,18401,23880,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	8412884	8435271	chr6:8412884-8435271	1	-	8413548	8430064	789624	10	815,70,112,93,98,108,155,122,294,44,	0,2023,3999,4517,6695,7836,9585,15052,16979,22343,
#Partially deleted in new
chr6	8413067	8435483	chr6:8413067-8435483	1	-	8413548	8434387	789624	11	632,70,112,93,98,108,155,122,294,46,407,	0,1840,3816,4334,6512,7653,9402,14869,16796,21317,22009,
#Partially deleted in new
chr6	8413073	8435561	chr6:8413073-8435561	0	-	8418813	8434387	789624	12	626,70,112,93,142,98,108,155,122,294,46,334,	0,1834,3810,4328,5670,6506,7647,9396,14863,16790,21311,22154,
#Partially deleted in new
chr6	8413093	8435611	chr6:8413093-8435611	3	-	8413548	8434387	789624	11	606,70,112,93,98,108,155,122,294,46,269,	0,1814,3790,4308,6486,7627,9376,14843,16770,21291,22249,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	8435567	9194766	chr6:8435567-9194766	0	+	8435567	8435567	8553170	7	611,92,64,130,72,170,2248,	0,2372,400943,556597,610852,753298,756951,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	8435577	8789617	chr6:8435577-8789617	0	+	8435577	8435577	8553170	6	601,92,119,147,101,796,	0,2362,344671,348613,349539,353244,
#Partially deleted in new
chr6	8435577	8785443	chr6:8435577-8785443	0	+	8435577	8435577	789624	5	601,92,59,147,327,	0,2362,123007,348613,349539,
#Partially deleted in new
chr6	8435577	8785443	chr6:8435577-8785443	0	+	8435577	8435577	8553170	5	601,69,182,158,327,	0,2385,141690,348602,349539,
#Partially deleted in new
chr6	8435577	8786914	chr6:8435577-8786914	0	+	8435577	8435577	8553170	4	601,92,147,1798,	0,2362,348613,349539,
#Partially deleted in new
chr6	8435577	8785443	chr6:8435577-8785443	0	+	8435577	8435577	8553170	5	601,69,59,158,327,	0,2385,123007,348602,349539,
#Partially deleted in new
chr6	8435581	8786914	chr6:8435581-8786914	0	+	8435581	8435581	8553170	4	597,69,147,1798,	0,2381,348609,349535,
#Partially deleted in new
chr6	8435584	8786882	chr6:8435584-8786882	0	+	8435584	8435584	8553170	5	594,69,59,147,1766,	0,2378,123000,348606,349532,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	8435588	8841127	chr6:8435588-8841127	0	+	8435588	8435588	8553170	5	590,92,59,64,2342,	0,2351,122996,400922,403197,
#Partially deleted in new
chr6	8435601	8785323	chr6:8435601-8785323	0	+	8435601	8435601	8553170	6	577,69,59,119,158,202,	0,2361,122983,324775,348578,349520,
#Partially deleted in new
chr6	8435605	8785443	chr6:8435605-8785443	0	+	8435605	8435605	8553170	4	573,92,158,327,	0,2334,348574,349511,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	8435619	8792308	chr6:8435619-8792308	0	+	8435619	8435619	8553170	7	559,69,147,101,125,163,364,	0,2343,348571,349497,353202,354652,356325,
#Partially deleted in new
chr6	8435619	8785433	chr6:8435619-8785433	0	+	8435619	8435619	8553170	4	559,69,158,317,	0,2343,348560,349497,
#Partially deleted in new
chr6	8435619	8785432	chr6:8435619-8785432	0	+	8435619	8435619	8553170	6	559,69,59,119,147,316,	0,2343,122965,324757,348571,349497,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	8435619	8792306	chr6:8435619-8792306	0	+	8435619	8435619	8553170	6	559,69,147,101,1613,362,	0,2343,348571,349497,353202,356325,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	8435622	8841108	chr6:8435622-8841108	0	+	8435622	8435622	8553170	5	556,69,121,64,2323,	0,2340,344264,400888,403163,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	8435622	8712293	chr6:8435622-8712293	0	+	8435622	8435622	789624	4	556,69,59,1685,	0,2340,122962,274986,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	8435623	8785433	chr6:8435623-8785433	0	+	8435623	8435623	8553170	8	555,92,59,107,160,119,147,317,	0,2316,122961,319162,324175,324753,348567,349493,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	8435626	8792311	chr6:8435626-8792311	0	+	8435626	8435626	8553170	7	552,69,147,101,143,163,367,	0,2336,348564,349490,353195,354645,356318,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	8435628	8790298	chr6:8435628-8790298	0	+	8435628	8435628	8553170	6	550,92,161,147,101,1477,	0,2311,171379,348562,349488,353193,
#Partially deleted in new
chr6	8435630	8785445	chr6:8435630-8785445	0	+	8435630	8435630	8553170	6	548,92,142,59,147,329,	0,2309,34360,122954,348560,349486,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	8435635	8857942	chr6:8435635-8857942	0	+	8435635	8435635	8553170	4	543,69,64,1549,	0,2327,400875,420758,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	8435637	8940348	chr6:8435637-8940348	0	+	8435637	8435637	8553170	8	541,92,98,59,64,118,44,1805,	0,2302,111479,122947,400873,490176,497204,502906,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	8435637	9225381	chr6:8435637-9225381	2	+	8435637	8435637	8553170	11	541,69,59,64,147,118,95,106,130,72,443,	0,2325,122947,400873,488048,490176,524218,525821,556527,610782,789301,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	8435637	8611044	chr6:8435637-8611044	0	+	8435637	8435637	8553170	3	541,69,2183,	0,2325,173224,
#Partially deleted in new
chr6	8435637	9239687	chr6:8435637-9239687	0	+	8435637	8435637	8553170	8	541,69,64,130,72,132,489,1385,	0,2325,400873,556527,610782,789301,789689,802665,
#Partially deleted in new
chr6	8435637	8470725	chr6:8435637-8470725	0	+	8435637	8435637	8553170	3	541,92,735,	0,2302,34353,
#Partially deleted in new
chr6	8435639	8653796	chr6:8435639-8653796	0	+	8435639	8435639	8553170	4	539,69,59,252,	0,2323,122945,217905,
#Partially deleted in new
chr6	8435639	8471005	chr6:8435639-8471005	0	+	8435639	8435639	8553170	3	539,69,1015,	0,2323,34351,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	8435639	8475219	chr6:8435639-8475219	0	+	8435639	8435639	8553170	4	539,69,142,1665,	0,2323,34351,37915,
#Partially deleted in new
chr6	8435640	8786348	chr6:8435640-8786348	0	+	8435640	8435640	8553170	5	538,92,59,158,1232,	0,2299,122944,348539,349476,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	8435640	9227650	chr6:8435640-9227650	0	+	8435640	8435640	8553170	9	538,92,59,64,118,130,72,132,2324,	0,2299,122944,400870,490173,556524,610779,789298,789686,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	8435640	8841253	chr6:8435640-8841253	0	+	8435640	8435640	8553170	6	538,92,59,120,64,2468,	0,2299,122944,395861,400870,403145,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	8435640	8792311	chr6:8435640-8792311	0	+	8435640	8435640	8553170	6	538,69,59,147,101,367,	0,2322,122944,348550,349476,356304,
#Partially deleted in new
chr6	8435640	9225324	chr6:8435640-9225324	0	+	8435640	8435640	8553170	7	538,69,64,130,72,170,386,	0,2322,400870,556524,610779,753225,789298,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	8435643	8861999	chr6:8435643-8861999	0	+	8435643	8435643	8553170	7	535,92,59,64,115,227,1884,	0,2296,122941,400867,420036,422485,424472,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	8435644	8875024	chr6:8435644-8875024	1	+	8435644	8435644	8553170	6	534,69,59,64,130,2712,	0,2318,122940,400866,436442,436668,
#Partially deleted in new
chr6	8435644	9287482	chr6:8435644-9287482	0	+	8435644	8435644	8553170	7	534,92,64,130,72,106,1153,	0,2295,400866,556520,610775,848116,850685,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	8435644	8756727	chr6:8435644-8756727	0	+	8435644	8435644	8553170	4	534,69,59,1942,	0,2318,122940,319141,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	8435645	8841224	chr6:8435645-8841224	0	+	8435645	8435645	8553170	6	533,92,59,120,64,2434,	0,2294,122939,395856,400865,403145,
#Partially deleted in new
chr6	8435645	8862080	chr6:8435645-8862080	0	+	8435645	8435645	8553170	6	533,69,59,64,115,1965,	0,2317,122939,400865,420034,424470,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	8435645	8785442	chr6:8435645-8785442	0	+	8435645	8435645	8553170	5	533,69,121,147,326,	0,2317,344241,348545,349471,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	8435646	8792307	chr6:8435646-8792307	0	+	8435646	8435646	8553170	7	532,92,59,147,101,163,363,	0,2293,122938,348544,349470,354625,356298,
#Partially deleted in new
chr6	8435647	8785442	chr6:8435647-8785442	0	+	8435647	8435647	8553170	5	531,69,59,147,321,	0,2315,122937,348543,349474,
#Partially deleted in new
chr6	8435647	8785442	chr6:8435647-8785442	0	+	8435647	8435647	8553170	6	531,92,59,119,147,326,	0,2292,122937,324729,348543,349469,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	8435653	9226156	chr6:8435653-9226156	0	+	8435653	8435653	8553170	10	525,69,64,147,118,130,72,170,132,830,	0,2309,400857,488032,490160,556511,610766,753212,789285,789673,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	8435658	8792311	chr6:8435658-8792311	0	+	8435658	8435658	8553170	7	520,92,147,155,125,163,367,	0,2281,348532,349458,353163,354613,356286,
#Partially deleted in new
chr6	8435658	8785432	chr6:8435658-8785432	0	+	8435658	8435658	8553170	5	520,69,119,147,316,	0,2304,324718,348532,349458,
#Partially deleted in new
chr6	8435658	8785442	chr6:8435658-8785442	0	+	8435658	8435658	8553170	5	520,92,119,147,326,	0,2281,324718,348532,349458,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	8435658	8653793	chr6:8435658-8653793	0	+	8435658	8435658	8553170	4	520,92,97,249,	0,2281,216635,217886,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	8435658	8653776	chr6:8435658-8653776	0	+	8435658	8435658	8553170	4	520,92,104,232,	0,2281,216628,217886,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	8435662	9227098	chr6:8435662-9227098	0	+	8435662	8435662	8553170	11	516,92,98,59,64,110,118,130,72,132,1772,	0,2277,111454,122922,400848,525792,550067,556502,610757,789276,789664,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	8435711	8985789	chr6:8435711-8985789	0	+	8435711	8435711	8553170	9	467,92,59,64,147,118,95,106,60,	0,2228,122873,400799,487974,490102,524144,525747,550018,
#Partially deleted in new
chr6	8435711	8789677	chr6:8435711-8789677	0	+	8435711	8435711	8553170	5	467,69,147,155,856,	0,2251,348479,349405,353110,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	8435721	8501635	chr6:8435721-8501635	0	+	8435721	8435721	8553170	4	457,69,94,359,	0,2241,57963,65555,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	8435750	8785443	chr6:8435750-8785443	0	+	8435750	8435750	8553170	6	428,69,59,161,147,327,	0,2212,122834,171257,348440,349366,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	8435855	8785443	chr6:8435855-8785443	0	+	8435855	8435855	8553170	6	323,92,59,121,147,327,	0,2084,122729,344031,348335,349261,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	8435872	8653799	chr6:8435872-8653799	0	+	8435872	8435872	8553170	4	306,69,104,255,	0,2090,216414,217672,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	8435923	8989084	chr6:8435923-8989084	0	+	8435923	8435923	8553170	9	255,69,59,64,113,95,106,114,343,	0,2039,122661,400587,523712,523932,525535,531170,552818,
#Partially deleted in new
chr6	8435948	8849041	chr6:8435948-8849041	0	+	8435948	8435948	8553170	6	230,69,59,64,197,277,	0,2014,122636,400562,402837,412816,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	8436032	9294133	chr6:8436032-9294133	0	+	8436032	8436032	8553170	9	146,69,98,64,130,72,106,54,1044,	0,1930,111084,400478,556132,610387,847728,855937,857057,
#Partially deleted in new
chr6	8436132	8785435	chr6:8436132-8785435	0	+	8436132	8436132	8553170	6	46,69,142,59,147,319,	0,1830,33858,122452,348058,348984,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	8436134	9052423	chr6:8436134-9052423	0	+	8436134	8436134	8553170	12	44,69,64,147,118,113,95,110,130,54,72,2453,	0,1828,400376,487551,489679,523501,523721,525320,556030,587136,610285,613836,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	8436143	8841101	chr6:8436143-8841101	0	+	8436143	8436143	8553170	5	35,69,59,64,2316,	0,1819,122441,400367,402642,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	8558584	8756723	chr6:8558584-8756723	0	+	8558584	8558584	8553170	3	59,63,1938,	0,192420,196201,
#Partially deleted in new
chr6	8558584	8810394	chr6:8558584-8810394	0	+	8558584	8558584	8553170	6	59,147,101,176,184,478,	0,225606,226532,240549,246544,251332,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	8652136	8654237	chr6:8652136-8654237	0	+	8652136	8652136	8553170	2	254,693,	0,1408,
#Duplicated in new
chr6	8652261	8653814	chr6:8652261-8653814	0	+	8652261	8652261	8553170	2	875,270,	0,1283,
#Partially deleted in new
chr6	8653557	8653797	chr6:8653557-8653797	3	+	8653557	8653557	8553170	1	240,	0,
#Deleted in new
chr6	8783274	8786889	chr6:8783274-8786889	0	+	8783274	8783274	8553170	2	1063,1773,	0,1842,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	8831501	8857622	chr6:8831501-8857622	0	+	8831501	8831501	8553170	5	120,64,113,115,1229,	0,5009,19337,24178,24892,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	8835900	8841205	chr6:8835900-8841205	0	+	8835900	8835900	8553170	3	79,64,2420,	0,610,2885,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	8854772	8858389	chr6:8854772-8858389	0	+	8854772	8854772	8553170	4	77,115,128,261,	0,907,1205,3356,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	8887937	8993096	chr6:8887937-8993096	0	+	8887937	8887937	8553170	5	589,95,109,106,932,	0,71918,72769,73521,104227,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	8906071	9096691	chr6:8906071-9096691	0	+	8906071	8906071	8553170	5	85,118,72,92,1347,	0,19742,140348,186145,189273,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	8906077	8940358	chr6:8906077-8940358	0	+	8906077	8906077	8553170	3	79,118,1815,	0,19736,32466,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	8923690	8939589	chr6:8923690-8939589	0	+	8923690	8923690	8553170	4	142,118,90,1046,	0,2123,13700,14853,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	8965187	9096238	chr6:8965187-9096238	0	+	8965187	8965187	8553170	5	270,130,72,92,894,	0,26977,81232,127029,130157,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	8965314	9096238	chr6:8965314-9096238	0	+	8965314	8965314	8553170	6	143,130,72,92,159,894,	0,26850,81105,126902,127279,130030,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	8965406	9095697	chr6:8965406-9095697	0	+	8965406	8965406	8553170	6	51,130,72,192,92,353,	0,26758,81013,125473,126810,129938,
#Partially deleted in new
chr6	8992183	9096238	chr6:8992183-9096238	0	+	8992183	8992183	8553170	3	111,72,894,	0,54236,103161,
#Partially deleted in new
chr6	9025864	9096668	chr6:9025864-9096668	0	+	9025864	9025864	8553170	5	44,131,72,92,1324,	0,18397,20555,66352,69480,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	9040844	9096238	chr6:9040844-9096238	0	+	9040844	9040844	8553170	4	109,72,92,894,	0,5575,51372,54500,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	9041623	9096238	chr6:9041623-9096238	0	+	9041623	9041623	8553170	3	539,72,894,	0,4796,53721,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	9041624	9096238	chr6:9041624-9096238	0	+	9041624	9041624	8553170	5	538,131,72,92,894,	0,2637,4795,50592,53720,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	9041624	9096238	chr6:9041624-9096238	0	+	9041624	9041624	8553170	4	538,72,92,894,	0,4795,50592,53720,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	9041626	9096661	chr6:9041626-9096661	0	+	9041626	9041626	8553170	5	536,72,201,92,1317,	0,4793,49253,50590,53718,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	9041832	9096238	chr6:9041832-9096238	0	+	9041832	9041832	8553170	5	330,72,92,159,894,	0,4587,50384,50761,53512,
#Partially deleted in new
chr6	9124220	9161777	chr6:9124220-9161777	3	-	9124220	9124220	8553170	3	486,120,55,	0,16800,37502,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	9224593	9226261	chr6:9224593-9226261	0	+	9224593	9224593	8553170	2	477,935,	0,733,
#Partially deleted in new
chr6	9596109	9599793	chr6:9596109-9599793	5	-	9596109	9596109	16724991	3	215,147,122,	0,2623,3562,
#Partially deleted in new
chr6	9596289	9939328	chr6:9596289-9939328	4	-	9596289	9596289	16724991	19	35,147,206,160,164,253,216,125,83,214,263,278,121,77,164,87,177,67,40,	0,2443,14331,76745,101344,108900,111467,172641,179517,213287,222872,243947,246226,249227,304036,312228,336480,336952,342999,
#Partially deleted in new
chr6	9596296	9939349	chr6:9596296-9939349	7	-	9596296	9596296	16724991	19	28,147,206,160,164,253,216,125,83,214,263,278,121,77,164,87,177,67,61,	0,2436,14324,76738,101337,108893,111460,172634,179510,213280,222865,243940,246219,249220,304029,312221,336473,336945,342992,
#Partially deleted in new
chr6	9705424	9933281	chr6:9705424-9933281	4	-	9705424	9705424	16724991	10	18,216,125,83,278,121,77,87,177,40,	0,2332,63506,70382,134812,137091,140092,203093,227345,227817,
#Partially deleted in new
chr6	9707761	9939319	chr6:9707761-9939319	4	-	9707761	9707761	16724991	8	211,125,83,138,87,177,67,31,	0,61169,68045,101815,200756,225008,225480,231527,
#Partially deleted in new
chr6	9707932	9933267	chr6:9707932-9933267	4	-	9707932	9707932	16724991	7	40,125,83,21,87,177,26,	0,60998,67874,111471,200585,224837,225309,
#Partially deleted in new
chr6	9750250	9939349	chr6:9750250-9939349	4	-	9750250	9750250	16724991	7	108,125,83,87,177,67,61,	0,18680,25556,158267,182519,182991,189038,
#Partially deleted in new
chr6	9809744	9933281	chr6:9809744-9933281	4	-	9809744	9809744	16724991	12	46,263,278,121,77,72,133,164,69,87,177,40,	0,9417,30492,32771,35772,40653,87126,90581,93628,98773,123025,123497,
#Partially deleted in new
chr6	9819161	9908520	chr6:9819161-9908520	4	-	9819161	9819161	16724991	9	263,278,92,121,77,133,164,69,3,	0,21075,22770,23354,26355,77709,81164,84211,89356,
#Partially deleted in new
chr6	9840321	9933289	chr6:9840321-9933289	4	-	9840321	9840321	16724991	9	193,121,77,72,164,34,87,177,48,	0,2194,5195,10076,60004,63051,68196,92448,92920,
#Partially deleted in new
chr6	9896710	10060765	chr6:9896710-10060765	4	-	9896710	9896710	16724991	8	293,164,69,87,177,67,61,116,	0,3615,6662,11807,36059,36531,42578,163939,
#Partially deleted in new
chr6	9896865	9939328	chr6:9896865-9939328	4	-	9896865	9896865	16724991	8	138,164,69,87,12,177,67,40,	0,3460,6507,11652,25043,35904,36376,42423,
#Partially deleted in new
chr6	9900412	9977599	chr6:9900412-9977599	4	-	9900412	9900412	16724991	6	77,87,177,67,61,186,	0,8105,32357,32829,38876,77001,
#Partially deleted in new
chr6	9939288	10211608	chr6:9939288-10211608	5	-	9939288	9939288	16724991	3	61,106,231,	0,220105,272089,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	9939288	10114774	chr6:9939288-10114774	4	-	9939288	9939288	16724991	5	61,205,36,117,45,	0,3840,8138,121361,175441,
#Partially deleted in new
chr6	10060701	10211540	chr6:10060701-10211540	4	-	10060701	10060701	16724991	3	76,106,163,	0,98692,150676,
#Deleted in new
chr6	10118451	10119253	chr6:10118451-10119253	7	+	10118451	10118451	16724991	1	802,	0,
#Deleted in new
chr6	10213880	10214362	chr6:10213880-10214362	7	-	10213880	10213880	16724991	1	482,	0,
#Deleted in new
chr6	10222035	10222161	chr6:10222035-10222161	3	+	10222035	10222035	8553170	1	126,	0,
#Partially deleted in new
chr6	10365592	10366582	chr6:10365592-10366582	7	-	10365592	10365592	16724991	2	405,270,	0,720,
#Deleted in new
chr6	10393185	10404594	chr6:10393185-10404594	0	-	10393523	10404594	789624	3	376,119,87,	0,9306,11322,
#Deleted in new
chr6	10396676	10412389	chr6:10396676-10412389	1	-	10398416	10411596	789624	7	2029,142,119,232,52,435,820,	0,3771,5815,7831,10116,13224,14893,
#Deleted in new
chr6	10396676	10415262	chr6:10396676-10415262	1	-	10398416	10414991	789624	7	2029,142,119,232,52,435,322,	0,3771,5815,7831,10116,13224,18264,
#Deleted in new
chr6	10397409	10412175	chr6:10397409-10412175	0	-	10406821	10411596	789624	8	1296,142,119,232,52,238,54,606,	0,3038,5082,7098,9383,12491,12872,14160,
#Deleted in new
chr6	10397871	10419638	chr6:10397871-10419638	1	-	10398416	10419450	789624	7	834,142,119,232,52,435,221,	0,2576,4620,6636,8921,12029,21546,
#Deleted in new
chr6	10397914	10415206	chr6:10397914-10415206	0	-	10406821	10414991	789624	8	791,142,119,232,52,238,54,266,	0,2533,4577,6593,8878,11986,12367,17026,
#Deleted in new
chr6	10398012	10416190	chr6:10398012-10416190	3	-	10398416	10414985	789624	8	693,142,119,232,52,435,129,269,	0,2435,4479,6495,8780,11888,16928,17909,
#Deleted in new
chr6	10398601	10414985	chr6:10398601-10414985	0	-	10398601	10414985	789624	6	104,119,232,52,435,45,	0,3890,5906,8191,11299,16339,
#Deleted in new
chr6	10398687	10411018	chr6:10398687-10411018	0	-	10398687	10398687	8553170	8	18,142,119,232,52,238,54,159,	0,1760,3804,5820,8105,11213,11594,12172,
#Deleted in new
chr6	10400713	10410094	chr6:10400713-10410094	0	-	10400732	10410094	789624	5	78,119,232,52,194,	0,1778,3794,6079,9187,
#Deleted in new
chr6	10402025	10414985	chr6:10402025-10414985	0	-	10402025	10402025	8553170	5	585,232,52,435,45,	0,2482,4767,7875,12915,
#Deleted in new
chr6	10402537	10415000	chr6:10402537-10415000	0	-	10402537	10414991	789624	4	73,232,52,60,	0,1970,4255,12403,
#Deleted in new
chr6	10404501	10407928	chr6:10404501-10407928	3	+	10404501	10404501	789624	1	3427,	0,
#Deleted in new
chr6	10404620	10417207	chr6:10404620-10417207	0	-	10404620	10404620	8553170	4	119,52,435,287,	0,2172,5280,12300,
#Deleted in new
chr6	10404667	10419659	chr6:10404667-10419659	0	-	10404667	10404667	8553170	5	72,52,238,54,242,	0,2125,5233,5614,14750,
#Deleted in new
chr6	10406135	10412046	chr6:10406135-10412046	0	-	10406135	10406135	8553170	3	709,435,477,	0,3765,5434,
#Deleted in new
chr6	10406793	10410942	chr6:10406793-10410942	0	-	10406793	10406793	8553170	3	51,435,83,	0,3107,4066,
#Deleted in new
chr6	10409085	10419554	chr6:10409085-10419554	0	-	10409085	10409085	8553170	2	1250,137,	0,10332,
#Deleted in new
chr6	10409339	10416446	chr6:10409339-10416446	3	+	10409339	10409339	8553170	3	58,371,1146,	0,5341,5961,
#Deleted in new
chr6	10409996	10412879	chr6:10409996-10412879	0	-	10409996	10412781	789624	2	339,278,	0,2605,
#Deleted in new
chr6	10414577	10415722	chr6:10414577-10415722	0	+	10414577	10414577	8553170	2	474,436,	0,709,
#Deleted in new
chr6	10418188	10419623	chr6:10418188-10419623	0	-	10418188	10418188	8553170	2	496,206,	0,1229,
#Deleted in new
chr6	10423139	10426176	chr6:10423139-10426176	3	-	10423139	10423139	8553170	3	364,95,80,	0,1618,2957,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	10426622	10429110	chr6:10426622-10429110	3	+	10426622	10426622	8553170	3	138,87,383,	0,1460,2105,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	10429254	10434822	chr6:10429254-10434822	0	-	10429254	10429254	789624	3	1059,179,310,	0,4993,5258,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	10429547	10434874	chr6:10429547-10434874	0	-	10429547	10429547	8553170	2	766,233,	0,5094,
#Partially deleted in new
chr6	10429708	10434495	chr6:10429708-10434495	0	-	10429708	10429708	8553170	2	605,248,	0,4539,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	10429717	10434835	chr6:10429717-10434835	3	-	10429717	10429717	8553170	3	596,116,194,	0,4530,4924,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	10429795	10434817	chr6:10429795-10434817	1	-	10429795	10429795	8553170	4	518,226,179,305,	0,3232,4452,4717,
#Partially deleted in new
chr6	10434315	10452247	chr6:10434315-10452247	0	+	10434315	10434315	8553170	2	89,345,	0,17587,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	10434328	10456781	chr6:10434328-10456781	3	+	10434328	10434328	789624	4	76,154,80,346,	0,17574,18419,22107,
#Partially deleted in new
chr6	10439716	10439794	chr6:10439716-10439794	3	+	10439716	10439716	5263520	1	78,	0,
#Deleted in new
chr6	10459905	10460541	chr6:10459905-10460541	7	-	10459905	10459905	16724991	1	636,	0,
#Partially deleted in new
chr6	10474499	10478502	chr6:10474499-10478502	3	-	10474499	10474499	8553170	2	94,162,	0,3841,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	10492222	10627222	chr6:10492222-10627222	3	+	10509091	10626607	789624	5	172,112,72,93,806,	0,597,16864,129128,134194,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	10492223	10626972	chr6:10492223-10626972	0	+	10492223	10492223	8553170	4	171,112,93,556,	0,596,129127,134193,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	10492225	10528707	chr6:10492225-10528707	0	+	10492225	10492225	8553170	4	169,112,187,77,	0,594,35248,36405,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	10511035	10514546	chr6:10511035-10514546	3	-	10511035	10511035	8553170	2	260,1215,	0,2296,
#Deleted in new
chr6	10514281	10514973	chr6:10514281-10514973	7	+	10514281	10514281	16724991	1	692,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	10521282	10629368	chr6:10521282-10629368	1	+	10528911	10626607	789624	5	135,187,1206,93,2952,	0,6191,7348,100068,105134,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	10521308	10530267	chr6:10521308-10530267	0	+	10521308	10521308	8553170	3	109,187,1637,	0,6165,7322,
#Partially deleted in new
chr6	10521331	10626947	chr6:10521331-10626947	0	+	10521331	10521331	8553170	5	86,187,211,93,531,	0,6142,7299,100019,105085,
#Partially deleted in new
chr6	10521350	10626616	chr6:10521350-10626616	0	+	10521350	10521350	8553170	4	67,187,93,200,	0,6123,100000,105066,
#Partially deleted in new
chr6	10521419	10626557	chr6:10521419-10626557	0	+	10521419	10521419	8553170	3	175,93,141,	0,99931,104997,
#Partially deleted in new
chr6	10521484	10621422	chr6:10521484-10621422	0	+	10521484	10521484	8553170	4	110,187,211,72,	0,5989,7146,99866,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	10527365	10529279	chr6:10527365-10529279	0	+	10527365	10527365	8553170	2	295,649,	0,1265,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	10528355	10629367	chr6:10528355-10629367	1	+	10528911	10626607	789624	3	1481,93,2951,	0,92995,98061,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	10529796	10626464	chr6:10529796-10626464	0	+	10529796	10529796	8553170	4	40,427,93,48,	0,89408,91554,96620,
#Partially deleted in new
chr6	10529811	10621645	chr6:10529811-10621645	0	+	10529811	10529811	8553170	2	25,295,	0,91539,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	10556006	10629367	chr6:10556006-10629367	1	+	10556423	10626607	789624	3	1336,93,2951,	0,65344,70410,
#Partially deleted in new
chr6	10556423	10557993	chr6:10556423-10557993	1	+	10556423	10557993	789624	2	923,16,	0,1554,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	10556800	10619441	chr6:10556800-10619441	0	+	10556800	10556800	8553170	2	542,237,	0,62404,
#Deleted in new
chr6	10574748	10575227	chr6:10574748-10575227	7	-	10574748	10574748	16724991	1	479,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	10585745	10629368	chr6:10585745-10629368	1	+	10585989	10626607	789624	3	1169,93,2952,	0,35605,40671,
#Deleted in new
chr6	10633761	10634695	chr6:10633761-10634695	7	+	10633761	10633761	16724991	1	934,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	10659497	10692860	chr6:10659497-10692860	3	+	10659497	10659497	8553170	6	109,112,126,66,182,2872,	0,13219,24626,26417,26578,30491,
#Partially deleted in new
chr6	10671417	10694533	chr6:10671417-10694533	1	-	10671455	10684851	789624	5	181,46,75,199,40,	0,11769,13431,15548,23076,
#Partially deleted in new
chr6	10671419	10694606	chr6:10671419-10694606	3	-	10671455	10687550	789624	5	179,46,199,82,113,	0,11767,15546,16060,23074,
#Partially deleted in new
chr6	10671421	10694609	chr6:10671421-10694609	1	-	10671455	10686974	789624	4	177,46,91,116,	0,11765,15544,23072,
#Partially deleted in new
chr6	10671421	10687550	chr6:10671421-10687550	1	-	10671455	10687550	789624	4	177,46,199,71,	0,11765,15544,16058,
#Partially deleted in new
chr6	10671421	10694533	chr6:10671421-10694533	0	-	10671421	10671421	8553170	4	177,46,82,40,	0,11765,16058,23072,
#Partially deleted in new
chr6	10671421	10694797	chr6:10671421-10694797	1	-	10671455	10684851	789624	6	177,90,46,75,199,95,	0,1125,11765,13427,15544,23281,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	10674657	10674768	chr6:10674657-10674768	3	-	10674657	10674657	8553170	1	111,	0,
#Partially deleted in new
chr6	10694694	10709782	chr6:10694694-10709782	3	+	10694985	10709452	789624	10	375,163,121,75,53,146,98,100,124,545,	0,2629,7674,7870,8710,9812,10052,12720,14258,14543,
#Partially deleted in new
chr6	10722914	10731119	chr6:10722914-10731119	3	+	10724613	10730666	0	6	327,78,77,102,88,505,	0,1641,2046,2992,5725,7700,
#Partially deleted in new
chr6	10722974	10731129	chr6:10722974-10731129	1	+	10724613	10730666	0	6	267,64,77,102,88,515,	0,1595,1986,2932,5665,7640,
#Partially deleted in new
chr6	10723108	10730763	chr6:10723108-10730763	0	+	10723108	10723108	8553170	4	133,102,88,149,	0,2798,5531,7506,
#Partially deleted in new
chr6	10723124	10731129	chr6:10723124-10731129	0	+	10723124	10723124	8553170	5	117,77,102,88,515,	0,1836,2782,5515,7490,
#Partially deleted in new
chr6	10724421	10728727	chr6:10724421-10728727	0	+	10724421	10724421	8553170	4	212,77,102,88,	0,539,1485,4218,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	10743323	10747569	chr6:10743323-10747569	3	-	10743323	10743323	8553170	2	991,109,	0,4137,
#Partially deleted in new
chr6	10746952	10747663	chr6:10746952-10747663	1	-	10746952	10746952	8553170	2	277,203,	0,508,
#Partially deleted in new
chr6	10747758	10756981	chr6:10747758-10756981	3	+	10749245	10756518	789624	6	123,67,77,102,91,515,	0,1443,1863,3374,7383,8708,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	10747758	10852753	chr6:10747758-10852753	0	+	10749245	10770084	789624	5	123,67,77,128,1194,	0,1443,1863,22318,103801,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	10747758	10829186	chr6:10747758-10829186	0	+	10749245	10770084	789624	7	123,67,77,128,49,128,180,	0,1443,1863,22318,78805,79938,81248,
#Partially deleted in new
chr6	10747758	10756971	chr6:10747758-10756971	1	+	10749201	10756518	789624	5	123,67,102,91,505,	0,1443,3374,7383,8708,
#Partially deleted in new
chr6	10747760	10838617	chr6:10747760-10838617	0	+	10749245	10770084	789624	6	121,67,77,128,108,64,	0,1441,1861,22316,90263,90793,
#Partially deleted in new
chr6	10747772	10756615	chr6:10747772-10756615	0	+	10747772	10747772	8553170	4	113,102,91,149,	0,3360,7369,8694,
#Partially deleted in new
chr6	10747772	10756958	chr6:10747772-10756958	0	+	10747772	10747772	8553170	5	109,77,102,91,492,	0,1849,3360,7369,8694,
#Partially deleted in new
chr6	10747793	10930423	chr6:10747793-10930423	3	+	10749245	10891541	789624	19	88,67,77,69,138,120,105,25,86,89,35,143,53,46,93,61,146,94,54,	0,1408,1828,143719,146073,146291,150217,151030,154883,155081,158226,159748,162354,163030,164879,165073,176702,178545,182576,
#Partially deleted in new
chr6	10747804	10755479	chr6:10747804-10755479	1	+	10749245	10755347	789624	4	77,67,77,338,	0,1397,1817,7337,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	10747804	10755810	chr6:10747804-10755810	1	+	10749245	10755347	789624	5	77,67,77,102,669,	0,1397,1817,3328,7337,
#Partially deleted in new
chr6	10747804	10750036	chr6:10747804-10750036	0	+	10747804	10747804	8553170	3	77,67,415,	0,1397,1817,
#Partially deleted in new
chr6	10747810	10756947	chr6:10747810-10756947	1	+	10749245	10756518	789624	5	71,67,77,91,481,	0,1391,1811,7331,8656,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	10747810	10829165	chr6:10747810-10829165	0	+	10749245	10770084	789624	5	71,67,77,128,159,	0,1391,1811,22266,81196,
#Partially deleted in new
chr6	10747816	10756973	chr6:10747816-10756973	1	+	10749245	10756514	789624	4	65,67,91,507,	0,1385,7325,8650,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	10747830	10759774	chr6:10747830-10759774	1	+	10749245	10759101	789624	6	51,67,77,102,91,836,	0,1371,1791,3302,7311,11108,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	10747830	10759684	chr6:10747830-10759684	1	+	10749245	10759101	789624	5	51,67,77,91,746,	0,1371,1791,7311,11108,
#Partially deleted in new
chr6	10749963	10756697	chr6:10749963-10756697	0	+	10749963	10749963	8553170	4	81,102,91,231,	0,1169,5178,6503,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	10751169	10829205	chr6:10751169-10829205	0	+	10751169	10770098	789624	4	65,91,128,199,	0,3972,18907,77837,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	10762722	10838495	chr6:10762722-10838495	1	-	10764451	10830648	789624	14	1884,120,132,149,173,312,168,172,133,80,122,55,330,154,	0,7388,12605,21701,28952,33275,39169,40997,46087,50921,55127,56163,67825,75619,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	10762722	10838531	chr6:10762722-10838531	3	-	10764451	10830648	789624	14	1884,120,132,149,173,312,168,172,133,80,122,55,330,29,	0,7388,12605,21701,28952,33275,39169,40997,46087,50921,55127,56163,67825,75780,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr6	10762739	10838555	chr6:10762739-10838555	1	-	10764451	10830648	789624	15	1867,120,75,132,149,173,312,168,172,133,80,122,55,330,53,	0,7371,10294,12588,21684,28935,33258,39152,40980,46070,50904,55110,56146,67808,75763,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	10762739	10838555	chr6:10762739-10838555	1	-	10764451	10830648	789624	13	1867,132,149,173,312,168,172,133,80,122,55,330,74,	0,12588,21684,28935,33258,39152,40980,46070,50904,55110,56146,67808,75742,
#Partially deleted in new
chr6	10764200	10830879	chr6:10764200-10830879	1	-	10784866	10830648	789624	14	406,120,132,149,105,173,312,168,172,133,80,122,55,332,	0,5910,11127,20223,20619,27474,31797,37691,39519,44609,49443,53649,54685,66347,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	10770076	10829203	chr6:10770076-10829203	0	+	10770076	10770076	8553170	3	128,49,197,	0,56487,58930,
#Partially deleted in new
chr6	10873222	10881941	chr6:10873222-10881941	3	-	10873994	10881793	789624	5	1711,126,113,253,238,	0,2668,3222,3917,8481,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr6	10886830	10974309	chr6:10886830-10974309	3	+	10887126	10963806	789624	30	305,69,138,120,105,25,86,89,35,143,53,46,93,61,146,94,128,48,145,50,130,71,70,102,107,92,100,59,62,358,	0,4682,7036,7254,11180,11993,15846,16044,19189,20711,23317,23993,25842,26036,37665,39508,40409,41572,43539,44609,48227,55628,55846,68285,69305,71953,74474,74669,76951,87121,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr6	10886830	10974194	chr6:10886830-10974194	0	+	10887126	10912676	789624	30	305,69,138,120,105,25,86,89,35,143,53,93,61,100,146,94,128,48,145,50,130,71,70,102,107,92,100,59,62,243,	0,4682,7036,7254,11180,11993,15846,16044,19189,20711,23317,25842,26036,35860,37665,39508,40409,41572,43539,44609,48227,55628,55846,68285,69305,71953,74474,74669,76951,87121,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr6	10891506	10963806	chr6:10891506-10963806	1	+	10891506	10963806	789624	28	75,138,120,105,25,86,89,35,143,53,46,93,61,146,94,128,48,145,50,130,71,70,102,107,92,100,59,25,	0,2360,2578,6504,7317,11170,11368,14513,16035,18641,19317,21166,21360,32989,34832,35733,36896,38863,39933,43551,50952,51170,63609,64629,67277,69798,69993,72275,
#Partially deleted in new
chr6	10898013	10924584	chr6:10898013-10924584	0	+	10898013	10910175	789624	9	102,25,86,89,53,46,93,61,89,	0,810,4663,4861,12134,12810,14659,14853,26482,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	10929953	10935174	chr6:10929953-10935174	0	+	10929953	10929953	8553170	3	561,50,117,	0,1486,5104,
#Partially deleted in new
chr6	10963306	10974154	chr6:10963306-10974154	0	+	10963306	10963306	8553170	3	59,62,203,	0,475,10645,
#Partially deleted in new
chr6	10980758	11044314	chr6:10980758-11044314	3	-	10983780	11044230	789624	8	3148,135,125,172,78,188,64,87,	0,8944,9559,14248,19328,24613,29987,63469,
#Deleted in new
chr6	11015585	11015888	chr6:11015585-11015888	7	+	11015585	11015585	16724991	1	303,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	11043523	11078076	chr6:11043523-11078076	0	+	11043523	11043523	8553170	3	237,91,388,	0,4385,34165,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	11043759	11078066	chr6:11043759-11078066	3	+	11043759	11043759	789624	5	66,91,111,91,378,	0,4149,5349,29695,33929,
#Partially deleted in new
chr6	11044512	11077818	chr6:11044512-11077818	0	+	11044512	11044512	8553170	3	256,91,130,	0,3396,33176,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	11044692	11078226	chr6:11044692-11078226	1	+	11044692	11044692	789624	3	274,91,538,	0,3216,32996,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	11094032	11138733	chr6:11094032-11138733	3	+	11094313	11134602	789624	2	357,4331,	0,40370,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	11094230	11135811	chr6:11094230-11135811	0	+	11094313	11134602	789624	3	159,585,507,	0,40172,41074,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	11102488	11111732	chr6:11102488-11111732	3	-	11103693	11105310	0	2	3142,56,	0,9188,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	11102490	11105674	chr6:11102490-11105674	1	-	11103693	11105310	0	1	3184,	0,
#Deleted in new
chr6	11154928	11155150	chr6:11154928-11155150	7	-	11154928	11154928	16724991	1	222,	0,
#Partially deleted in new
chr6	11173451	11259099	chr6:11173451-11259099	3	+	11173451	11173451	8553170	5	122,53,75,176,278,	0,11714,34009,85037,85370,
#Partially deleted in new
chr6	11183297	11232682	chr6:11183297-11232682	1	-	11185161	11232515	0	7	2374,90,1242,102,102,447,179,	0,4920,6666,9047,10293,29983,49206,
#Partially deleted in new
chr6	11183300	11232682	chr6:11183300-11232682	1	-	11185161	11232515	789624	6	2371,90,1242,102,102,179,	0,4917,6663,9044,10290,49203,
#Partially deleted in new
chr6	11183305	11382314	chr6:11183305-11382314	0	-	11213701	11306003	789624	10	2366,90,1242,102,102,151,447,94,164,176,	0,4912,6658,9039,10285,16965,29975,121760,122686,198833,
#Partially deleted in new
chr6	11184817	11382348	chr6:11184817-11382348	1	-	11185161	11306003	0	8	854,90,1242,102,102,447,164,210,	0,3400,5146,7527,8773,28463,121174,197321,
#Partially deleted in new
chr6	11190857	11192567	chr6:11190857-11192567	0	-	11190857	11190857	8553170	2	348,223,	0,1487,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	11198307	11232658	chr6:11198307-11232658	1	-	11200980	11232515	0	3	2739,447,155,	0,14973,34196,
#Partially deleted in new
chr6	11213632	11382303	chr6:11213632-11382303	2	-	11213632	11213721	789624	4	95,163,164,165,	0,37931,92359,168506,
#Partially deleted in new
chr6	11213643	11382299	chr6:11213643-11382299	0	-	11213643	11306003	789624	4	84,164,61,161,	0,92348,120857,168495,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	11248932	11382338	chr6:11248932-11382338	0	-	11248932	11248932	8553170	4	282,163,164,200,	0,2631,57059,133206,
#Partially deleted in new
chr6	11251263	11382272	chr6:11251263-11382272	0	-	11251263	11251263	8553170	3	463,164,134,	0,54728,130875,
#Partially deleted in new
chr6	11271445	11382332	chr6:11271445-11382332	0	-	11271445	11271445	8553170	3	387,164,194,	0,34546,110693,
#Partially deleted in new
chr6	11305065	11382306	chr6:11305065-11382306	0	-	11305065	11305065	8553170	3	282,164,168,	0,926,77073,
#Partially deleted in new
chr6	11305852	11382308	chr6:11305852-11382308	0	-	11305852	11305852	8553170	2	303,170,	0,76286,
#Partially deleted in new
chr6	11328524	11382318	chr6:11328524-11382318	0	-	11328524	11328524	8553170	3	351,61,180,	0,5976,53614,
#Partially deleted in new
chr6	11352156	11382348	chr6:11352156-11382348	0	-	11352156	11352156	8553170	2	624,210,	0,29982,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	11417349	11481239	chr6:11417349-11481239	3	+	11417349	11417349	8553170	3	230,183,286,	0,43935,63604,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	11487225	11515710	chr6:11487225-11515710	3	+	11487225	11487225	8553170	5	118,147,152,153,116,	0,339,3087,16285,28369,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	11503508	11503671	chr6:11503508-11503671	3	-	11503508	11503508	8553170	1	163,	0,
#Deleted in new
chr6	11514191	11516466	chr6:11514191-11516466	7	+	11514191	11514191	16724991	1	2275,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	11538277	11583524	chr6:11538277-11583524	3	+	11538277	11575561	789624	3	97,171,8094,	0,27388,37153,
#Deleted in new
chr6	11607551	11607981	chr6:11607551-11607981	3	+	11607551	11607551	8553170	1	430,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	11644066	11644343	chr6:11644066-11644343	3	+	11644066	11644066	8553170	1	277,	0,
#Deleted in new
chr6	11709818	11709960	chr6:11709818-11709960	3	+	11709818	11709818	8553170	1	142,	0,
#Partially deleted in new
chr6	11712053	11766332	chr6:11712053-11766332	0	-	11714477	11766332	789624	5	181,179,152,116,59,	0,2280,11295,23514,54220,
#Partially deleted in new
chr6	11713523	11779170	chr6:11713523-11779170	3	-	11714477	11778759	789624	6	989,152,116,102,135,564,	0,9825,22044,52750,54725,65083,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	11713674	11736714	chr6:11713674-11736714	0	-	11713674	11713674	8553170	5	838,106,152,116,711,	0,3634,9674,21893,22329,
#Partially deleted in new
chr6	11713953	11728557	chr6:11713953-11728557	0	-	11713953	11713953	8553170	3	559,152,231,	0,9395,14373,
#Partially deleted in new
chr6	11714320	11767804	chr6:11714320-11767804	0	-	11714320	11714320	8553170	5	192,152,116,102,151,	0,9028,21247,51953,53333,
#Partially deleted in new
chr6	11714377	11778803	chr6:11714377-11778803	1	-	11714477	11778759	789624	7	135,152,116,102,135,54,197,	0,8971,21190,51896,53871,55653,64229,
#Partially deleted in new
chr6	11717129	11735656	chr6:11717129-11735656	0	-	11717304	11735656	789624	3	285,152,89,	0,6219,18438,
#Partially deleted in new
chr6	11735569	11779628	chr6:11735569-11779628	0	-	11735569	11778759	789624	5	114,102,135,360,106,	0,30704,32679,43037,43953,
#Partially deleted in new
chr6	11738532	11778759	chr6:11738532-11778759	0	-	11768334	11778759	789624	5	90,102,135,59,153,	0,27741,29716,31498,40074,
#Deleted in new
chr6	11810601	11811248	chr6:11810601-11811248	3	+	11810601	11810601	8553170	2	148,406,	0,241,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	11861625	11862970	chr6:11861625-11862970	7	-	11861625	11861625	16724991	1	1345,	0,
#Partially deleted in new
chr6	11990342	11992012	chr6:11990342-11992012	3	-	11990342	11990342	8553170	2	178,98,	0,1572,
#Deleted in new
chr6	12007669	12008856	chr6:12007669-12008856	1	+	12007669	12007669	8553170	3	157,49,578,	0,271,609,
#Deleted in new
chr6	12007869	12008643	chr6:12007869-12008643	2	+	12007869	12007869	8553170	2	120,365,	0,409,
#Partially deleted in new
chr6	12008761	12120157	chr6:12008761-12120157	0	+	12015628	12120157	789624	4	114,143,54,268,	0,6764,80422,111128,
#Partially deleted in new
chr6	12011999	12120222	chr6:12011999-12120222	0	+	12015628	12120222	789624	4	55,143,54,333,	0,3526,77184,107890,
#Partially deleted in new
chr6	12012337	12164999	chr6:12012337-12164999	3	+	12015628	12164461	789624	9	229,143,54,5981,134,176,102,491,1717,	0,3188,76846,107552,117421,118429,123453,149101,150945,
#Partially deleted in new
chr6	12012337	12164998	chr6:12012337-12164998	1	+	12015628	12164461	789624	9	229,143,54,5981,138,169,102,491,1716,	0,3188,76846,107552,117421,118436,123453,149101,150945,
#Partially deleted in new
chr6	12012337	12164998	chr6:12012337-12164998	1	+	12130860	12164461	789624	8	229,143,54,5981,134,176,491,1716,	0,3188,76846,107552,117421,118429,149101,150945,
#Partially deleted in new
chr6	12012490	12161891	chr6:12012490-12161891	0	+	12020351	12161891	789624	7	76,143,171,54,45,102,453,	0,3035,7757,76693,107399,123300,148948,
#Partially deleted in new
chr6	12012701	12120180	chr6:12012701-12120180	0	+	12015628	12120180	789624	4	88,143,54,291,	0,2824,76482,107188,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	12015586	12039245	chr6:12015586-12039245	1	+	12015628	12037829	789624	2	82,1520,	0,22139,
#Partially deleted in new
chr6	12125745	12164575	chr6:12125745-12164575	0	+	12125745	12130772	789624	4	125,176,491,1293,	0,5021,35693,37537,
#Deleted in new
chr6	12290362	12297194	chr6:12290362-12297194	3	+	12290629	12296067	0	5	331,169,156,144,1233,	0,1978,3578,3898,5599,
#Deleted in new
chr6	12319452	12319592	chr6:12319452-12319592	7	+	12319452	12319452	16724991	1	140,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	12406485	12406781	chr6:12406485-12406781	3	-	12406485	12406485	8553170	1	296,	0,
#Deleted in new
chr6	12514109	12514724	chr6:12514109-12514724	7	+	12514109	12514109	16724991	1	615,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	12582914	12585404	chr6:12582914-12585404	3	-	12582914	12582914	8553170	2	593,301,	0,2189,
#Partially deleted in new
chr6	12716804	13290484	chr6:12716804-13290484	3	+	12718744	13287078	789624	15	92,45,149,147,165,81,168,322,248,157,56,62,141,77,3422,	0,704,1894,32839,336560,443399,465714,489010,511011,513232,556055,561463,566617,569341,570258,
#Partially deleted in new
chr6	12717660	13276123	chr6:12717660-13276123	1	+	12718744	13272923	789624	10	83,149,147,165,81,168,322,248,157,3264,	0,1038,31983,335704,442543,464858,488154,510155,512376,555199,
#Partially deleted in new
chr6	12718309	12934000	chr6:12718309-12934000	1	+	12718744	12933892	789624	4	131,149,147,368,	0,389,31334,215323,
#Partially deleted in new
chr6	12749434	13184820	chr6:12749434-13184820	0	+	12749434	13184820	789624	5	356,165,81,168,22,	0,303930,410769,433084,435364,
#Partially deleted in new
chr6	12957358	13182578	chr6:12957358-13182578	0	+	12957358	12957358	8553170	4	393,165,81,60,	0,96006,202845,225160,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	13053456	13230404	chr6:13053456-13230404	0	+	13053456	13230337	789624	5	73,81,168,207,231,	0,106747,129062,131342,176717,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	13264860	13274059	chr6:13264860-13274059	1	-	13264860	13264860	8553170	3	161,340,52,	0,2635,9147,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	13266541	13326912	chr6:13266541-13326912	2	-	13305100	13326898	0	8	1294,126,130,146,138,188,81,126,	0,38520,39856,41058,50029,54366,58552,60245,
#Partially deleted in new
chr6	13272211	13286197	chr6:13272211-13286197	0	+	13272211	13272211	8553170	5	257,56,62,141,52,	0,648,6056,11210,13934,
#Partially deleted in new
chr6	13272671	13287481	chr6:13272671-13287481	1	+	13272776	13287078	789624	5	244,62,141,77,419,	0,5596,10750,13474,14391,
#Partially deleted in new
chr6	13272756	13283907	chr6:13272756-13283907	1	+	13272776	13283643	789624	3	159,62,486,	0,5511,10665,
#Partially deleted in new
chr6	13278001	13283546	chr6:13278001-13283546	0	+	13278001	13278001	8553170	2	328,125,	0,5420,
#Deleted in new
chr6	13290017	13290490	chr6:13290017-13290490	3	-	13290017	13290017	8553170	1	473,	0,
#Partially deleted in new
chr6	13304950	13328531	chr6:13304950-13328531	1	-	13305100	13326898	0	8	237,130,146,138,188,81,120,76,	0,1447,2649,11620,15957,20143,21836,23505,
#Partially deleted in new
chr6	13304950	13328531	chr6:13304950-13328531	1	-	13305100	13326898	0	8	237,130,146,138,188,81,120,236,	0,1447,2649,11620,15957,20143,21836,23345,
#Partially deleted in new
chr6	13304953	13328583	chr6:13304953-13328583	1	-	13305100	13326898	0	7	234,130,146,188,81,120,128,	0,1444,2646,15954,20140,21833,23502,
#Partially deleted in new
chr6	13304953	13328583	chr6:13304953-13328583	1	-	13305100	13326898	0	7	234,130,146,138,188,120,128,	0,1444,2646,11617,15954,21833,23502,
#Partially deleted in new
chr6	13305617	13328458	chr6:13305617-13328458	1	-	13306515	13326898	789624	6	910,150,138,188,120,143,	0,1978,10953,15290,21169,22698,
#Partially deleted in new
chr6	13306397	13328531	chr6:13306397-13328531	0	-	13306397	13326898	789624	6	130,146,138,188,120,236,	0,1202,10173,14510,20389,21898,
#Partially deleted in new
chr6	13306397	13328531	chr6:13306397-13328531	0	-	13306397	13326898	789624	6	130,146,138,188,120,216,	0,1202,10173,14510,20389,21918,
#Partially deleted in new
chr6	13306444	13328531	chr6:13306444-13328531	0	-	13306444	13326898	789624	7	83,146,138,188,81,120,216,	0,1155,10126,14463,18649,20342,21871,
#Partially deleted in new
chr6	13306490	13328531	chr6:13306490-13328531	0	-	13306490	13326898	789624	6	37,146,138,188,177,76,	0,1109,10080,14417,20296,21965,
#Partially deleted in new
chr6	13306644	13328544	chr6:13306644-13328544	0	-	13306644	13306644	8553170	6	1101,138,188,81,120,249,	0,9926,14263,18449,20142,21651,
#Partially deleted in new
chr6	13307599	13327818	chr6:13307599-13327818	0	-	13307599	13326898	789624	5	146,138,188,177,141,	0,8971,13308,19187,20078,
#Partially deleted in new
chr6	13316620	13328130	chr6:13316620-13328130	0	-	13316620	13326898	789624	5	88,188,81,177,298,	0,4287,8473,10166,11212,
#Partially deleted in new
chr6	13316681	13328130	chr6:13316681-13328130	0	-	13316681	13326898	789624	5	27,188,81,120,298,	0,4226,8412,10105,11151,
#Partially deleted in new
chr6	13316697	13328531	chr6:13316697-13328531	0	-	13316697	13326898	789624	5	11,188,81,177,236,	0,4210,8396,10089,11598,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	13318717	13328555	chr6:13318717-13328555	0	-	13320712	13326898	789624	3	2378,120,100,	0,8069,9738,
#Partially deleted in new
chr6	13320831	13326912	chr6:13320831-13326912	0	-	13320831	13326898	789624	3	264,81,126,	0,4262,5955,
#Partially deleted in new
chr6	13323710	13328583	chr6:13323710-13328583	0	-	13323710	13326898	789624	4	68,81,120,268,	0,1383,3076,4605,
#Deleted in new
chr6	13326837	13328332	chr6:13326837-13328332	0	-	13326837	13326898	789624	2	69,500,	0,995,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	13357829	13408137	chr6:13357829-13408137	1	-	13364742	13365606	789624	2	7833,228,	0,50080,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	13357829	13487555	chr6:13357829-13487555	3	-	13364742	13486890	789624	2	7833,918,	0,128808,
#Partially deleted in new
chr6	13363354	13486183	chr6:13363354-13486183	1	-	13364742	13365606	789624	2	2308,173,	0,122656,
#Partially deleted in new
chr6	13469267	13487662	chr6:13469267-13487662	1	-	13470436	13486890	789624	2	1363,1025,	0,17370,
#Partially deleted in new
chr6	13469274	13486183	chr6:13469274-13486183	0	-	13469274	13469274	8553170	2	1356,173,	0,16736,
#Deleted in new
chr6	13486293	13486852	chr6:13486293-13486852	3	+	13486293	13486293	8553170	2	160,172,	0,387,
#Deleted in new
chr6	13521265	13522045	chr6:13521265-13522045	7	+	13521265	13521265	16724991	1	780,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	13547703	13548013	chr6:13547703-13548013	3	+	13547703	13547703	8553170	1	310,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	13574528	13615158	chr6:13574528-13615158	1	+	13591743	13611865	0	9	96,159,150,226,88,54,124,116,3369,	0,4922,9547,17140,20948,22434,24503,26305,37261,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	13574583	13614558	chr6:13574583-13614558	0	+	13584110	13591793	789624	9	41,159,150,226,88,54,124,116,2769,	0,4867,9492,17085,20893,22379,24448,26250,37206,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	13574593	13614558	chr6:13574593-13614558	1	+	13584110	13611865	0	9	31,159,150,134,226,88,124,116,2769,	0,4857,9482,13737,17075,20883,24438,26240,37196,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	13574598	13588425	chr6:13574598-13588425	0	+	13584110	13584997	789624	5	26,159,150,141,95,	0,4852,9477,10388,13732,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	13574600	13605739	chr6:13574600-13605739	1	+	13584110	13604518	0	10	24,159,150,134,226,88,54,124,116,1264,	0,4850,9475,13730,17068,20876,22362,24431,26233,29875,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	13574642	13614558	chr6:13574642-13614558	3	+	13584110	13611865	0	10	102,159,150,134,226,88,54,124,116,2769,	0,4808,9433,13688,17026,20834,22320,24389,26191,37147,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	13584202	13589543	chr6:13584202-13589543	0	+	13584202	13584202	8553170	3	23,134,484,	0,4128,4857,
#Deleted in new
chr6	13614110	13615155	chr6:13614110-13615155	3	-	13614110	13614110	8553170	1	1045,	0,
#Partially deleted in new
chr6	13615326	13621205	chr6:13615326-13621205	3	+	13615358	13620827	789624	8	298,61,59,32,82,122,78,452,	0,385,1136,2443,2731,4881,5081,5427,
#Partially deleted in new
chr6	13615546	13618217	chr6:13615546-13618217	0	+	13615546	13617821	789624	4	78,61,59,448,	0,165,916,2223,
#Partially deleted in new
chr6	13615588	13632739	chr6:13615588-13632739	0	+	13615588	13615588	8553170	9	36,61,59,32,82,122,78,103,347,	0,123,874,2181,2469,4619,4819,5165,16804,
#Partially deleted in new
chr6	13621497	13711564	chr6:13621497-13711564	3	-	13622361	13711505	0	14	995,112,152,122,148,191,109,113,185,23,168,53,112,630,	0,4155,10872,12933,16310,18065,19701,20981,23047,31161,35611,37282,75287,89437,
#Partially deleted in new
chr6	13622332	13632755	chr6:13622332-13632755	0	-	13622332	13622332	8553170	3	160,112,386,	0,3320,10037,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	13786556	13814568	chr6:13786556-13814568	3	-	13790808	13814429	789624	9	4308,115,54,72,42,102,104,120,554,	0,5321,7337,12276,13784,14731,15686,20368,27458,
#Partially deleted in new
chr6	13787133	13801345	chr6:13787133-13801345	0	-	13788672	13801345	789624	7	222,59,115,54,72,42,58,	0,1512,4744,6760,11699,13207,14154,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	13790787	13814568	chr6:13790787-13814568	0	-	13804076	13814429	789624	10	77,115,54,72,42,102,104,586,120,554,	0,1090,3106,8045,9553,10500,11455,12942,16137,23227,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	13825431	13826574	chr6:13825431-13826574	3	+	13825431	13825431	8553170	1	1143,	0,
#Partially deleted in new
chr6	13924445	13977272	chr6:13924445-13977272	0	+	13977119	13977272	789624	3	127,155,364,	0,49764,52463,
#Partially deleted in new
chr6	13924445	13980008	chr6:13924445-13980008	3	+	13977119	13977863	789624	3	127,155,3100,	0,49764,52463,
#Partially deleted in new
chr6	13924866	13980302	chr6:13924866-13980302	1	+	13977119	13977863	789624	3	157,155,3394,	0,49343,52042,
#Partially deleted in new
chr6	13924866	13980008	chr6:13924866-13980008	1	+	13977119	13977863	789624	4	157,83,155,3100,	0,36613,49343,52042,
#Partially deleted in new
chr6	13924895	13977606	chr6:13924895-13977606	0	+	13977119	13977606	789624	2	128,698,	0,52013,
#Partially deleted in new
chr6	13924954	13977158	chr6:13924954-13977158	0	+	13977119	13977158	789624	4	69,83,155,250,	0,36525,49255,51954,
#Partially deleted in new
chr6	13925192	13977367	chr6:13925192-13977367	0	+	13977119	13977367	789624	2	174,459,	0,51716,
#Partially deleted in new
chr6	13925192	13980008	chr6:13925192-13980008	1	+	13977119	13977863	789624	2	174,3100,	0,51716,
#Partially deleted in new
chr6	13949094	13949666	chr6:13949094-13949666	7	+	13949094	13949094	16724991	1	572,	0,
#Partially deleted in new
chr6	14004919	14006901	chr6:14004919-14006901	3	+	14004919	14004919	8553170	2	61,325,	0,1657,
#Partially deleted in new
chr6	14117255	14136918	chr6:14117255-14136918	1	+	14131543	14135236	789624	5	44,116,229,107,1811,	0,694,14264,16393,17852,
#Partially deleted in new
chr6	14117640	14136918	chr6:14117640-14136918	3	+	14117811	14135236	0	5	208,116,229,107,1811,	0,309,13879,16008,17467,
#Partially deleted in new
chr6	14152195	14211186	chr6:14152195-14211186	3	-	14152195	14152195	8553170	2	2515,106,	0,58885,
#Deleted in new
chr6	14156461	14156523	chr6:14156461-14156523	3	+	14156461	14156461	8553170	1	62,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	14229774	14231570	chr6:14229774-14231570	3	-	14229774	14229774	8553170	2	427,43,	0,1753,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	14280126	14285145	chr6:14280126-14285145	3	-	14280126	14280126	789624	2	3062,90,	0,4929,
#Partially deleted in new
chr6	14283047	14285454	chr6:14283047-14285454	1	-	14283047	14283047	789624	3	141,236,399,	0,897,2008,
#Partially deleted in new
chr6	14391230	14393288	chr6:14391230-14393288	3	-	14391230	14391230	8553170	4	274,51,79,85,	0,590,1073,1973,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	14394325	14404289	chr6:14394325-14404289	3	+	14394325	14394325	8553170	3	119,219,67,	0,727,9897,
#Deleted in new
chr6	14597513	14599690	chr6:14597513-14599690	3	-	14597513	14597513	8553170	2	86,60,	0,2117,
#Deleted in new
chr6	14646534	14646638	chr6:14646534-14646638	3	+	14646534	14646534	8553170	1	104,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	14661828	15021964	chr6:14661828-15021964	3	-	14661828	14661828	8553170	4	465,109,60,144,	0,128161,335587,359992,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	14976787	15090003	chr6:14976787-15090003	1	-	14976787	14976787	8553170	4	531,60,198,228,	0,20628,102846,112988,
#Partially deleted in new
chr6	15102945	15104130	chr6:15102945-15104130	7	-	15102945	15102945	16724991	2	137,732,	0,453,
#Deleted in new
chr6	15243922	15245000	chr6:15243922-15245000	3	-	15243922	15243922	8553170	1	1078,	0,
#Partially deleted in new
chr6	15246295	15522021	chr6:15246295-15522021	3	+	15246539	15520251	0	18	289,136,142,170,177,236,1039,503,93,119,71,115,106,183,131,184,108,1953,	0,127821,163928,205710,222246,241011,249836,254611,258204,260840,261050,262044,265000,265912,266619,266943,270865,273773,
#Deleted in new
chr6	15247814	15248634	chr6:15247814-15248634	3	-	15247814	15247814	789624	2	330,125,	0,695,
#Partially deleted in new
chr6	15248854	15522040	chr6:15248854-15522040	1	+	15468564	15520251	0	18	110,136,142,170,177,236,1039,503,93,119,71,115,106,183,131,184,108,1972,	0,125262,161369,203151,219687,238452,247277,252052,255645,258281,258491,259485,262441,263353,264060,264384,268306,271214,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	15314919	15315026	chr6:15314919-15315026	3	+	15314919	15314919	8553170	1	107,	0,
#Deleted in new
chr6	15324366	15324472	chr6:15324366-15324472	3	-	15324366	15324366	8553170	1	106,	0,
#Partially deleted in new
chr6	15501357	15508393	chr6:15501357-15508393	0	+	15501357	15501357	8553170	6	52,93,131,119,71,54,	0,3142,3807,5778,5988,6982,
#Deleted in new
chr6	15522194	15522300	chr6:15522194-15522300	3	-	15522194	15522194	8553170	1	106,	0,
#Partially deleted in new
chr6	15522800	15663042	chr6:15522800-15663042	1	-	15522974	15662869	789624	10	419,144,156,23,133,133,61,51,54,229,	0,1725,10439,70258,92466,104542,114943,128512,129286,140013,
#Partially deleted in new
chr6	15522806	15586015	chr6:15522806-15586015	1	-	15522974	15585761	789624	4	413,144,156,297,	0,1719,10433,62912,
#Partially deleted in new
chr6	15522809	15663058	chr6:15522809-15663058	1	-	15522974	15662869	789624	9	410,144,156,23,133,133,61,54,245,	0,1716,10430,70249,92457,104533,114934,129277,140004,
#Partially deleted in new
chr6	15522809	15663007	chr6:15522809-15663007	0	-	15651383	15662869	789624	10	410,144,156,23,133,133,61,96,54,194,	0,1716,10430,70249,92457,104533,114934,128503,129277,140004,
#Partially deleted in new
chr6	15522809	15663058	chr6:15522809-15663058	3	-	15522974	15662869	789624	8	410,144,156,23,133,133,61,245,	0,1716,10430,70249,92457,104533,114934,140004,
#Partially deleted in new
chr6	15522836	15663030	chr6:15522836-15663030	0	-	15524660	15662869	789624	9	383,142,160,23,133,133,61,54,217,	0,1689,10399,70222,92430,104506,114907,129250,139977,
#Partially deleted in new
chr6	15522842	15663058	chr6:15522842-15663058	0	-	15660436	15662869	789624	11	377,142,160,23,133,133,61,51,54,139,245,	0,1683,10393,70216,92424,104500,114901,128470,129244,137540,139971,
#Partially deleted in new
chr6	15523054	15548362	chr6:15523054-15548362	0	-	15523054	15533357	789624	4	165,144,156,33,	0,1471,10185,25275,
#Partially deleted in new
chr6	15523562	15662975	chr6:15523562-15662975	1	-	15524424	15662869	789624	9	1107,156,23,133,133,61,51,54,162,	0,9677,69496,91704,103780,114181,127750,128524,139251,
#Partially deleted in new
chr6	15523984	15662920	chr6:15523984-15662920	0	-	15660436	15662869	789624	10	685,156,23,133,133,61,51,54,139,107,	0,9255,69074,91282,103358,113759,127328,128102,136398,138829,
#Partially deleted in new
chr6	15524111	15533547	chr6:15524111-15533547	0	-	15524111	15524111	8553170	2	558,308,	0,9128,
#Partially deleted in new
chr6	15524539	15663020	chr6:15524539-15663020	0	-	15524539	15662869	789624	7	130,156,23,133,133,61,207,	0,8700,68519,90727,102803,113204,138274,
#Partially deleted in new
chr6	15934781	15935315	chr6:15934781-15935315	7	+	15934781	15934781	16724991	1	534,	0,
#Partially deleted in new
chr6	15994943	15999797	chr6:15994943-15999797	3	+	15994943	15994943	8553170	2	208,637,	0,4217,
#Deleted in new
chr6	16041380	16041614	chr6:16041380-16041614	7	-	16041380	16041380	16724991	1	234,	0,
#Partially deleted in new
chr6	16107621	16108593	chr6:16107621-16108593	7	+	16107621	16107621	16724991	1	972,	0,
#Partially deleted in new
chr6	16129124	16146881	chr6:16129124-16146881	3	+	16129322	16146751	0	7	285,191,186,198,165,421,220,	0,1432,12500,13895,14574,15772,17537,
#Partially deleted in new
chr6	16129170	16148248	chr6:16129170-16148248	1	+	16143098	16146751	789624	6	239,186,198,165,421,1587,	0,12454,13849,14528,15726,17491,
#Deleted in new
chr6	16141555	16141624	chr6:16141555-16141624	3	+	16141555	16141555	5263520	1	69,	0,
#Deleted in new
chr6	16160925	16161411	chr6:16160925-16161411	7	+	16160925	16160925	16724991	1	486,	0,
#Deleted in new
chr6	16163376	16163762	chr6:16163376-16163762	7	-	16163376	16163376	16724991	1	386,	0,
#Deleted in new
chr6	16171605	16172031	chr6:16171605-16172031	7	+	16171605	16171605	16724991	1	426,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	16205013	16205120	chr6:16205013-16205120	3	+	16205013	16205013	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	16232230	16232330	chr6:16232230-16232330	3	-	16232230	16232230	8553170	1	100,	0,
#Partially deleted in new
chr6	16238579	16295549	chr6:16238579-16295549	3	+	16238693	16295186	0	9	201,120,84,174,82,107,43,160,544,	0,8262,11704,15982,35835,40204,47213,51882,56426,
#Partially deleted in new
chr6	16257972	16295328	chr6:16257972-16295328	0	+	16257972	16257972	8553170	4	149,43,160,323,	0,27820,32489,37033,
#Partially deleted in new
chr6	16289517	16295544	chr6:16289517-16295544	0	+	16289517	16289517	8553170	3	51,160,539,	0,944,5488,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	16289944	16295121	chr6:16289944-16295121	0	+	16289944	16289944	8553170	2	677,116,	0,5061,
#Partially deleted in new
chr6	16299111	16761456	chr6:16299111-16761456	1	-	16306328	16328310	0	9	7748,2077,138,62,128,126,115,49,159,	0,27282,186860,223515,286668,358664,454121,454931,462186,
#Partially deleted in new
chr6	16299111	16761490	chr6:16299111-16761490	3	-	16306328	16328310	0	8	7748,2077,138,62,128,126,115,193,	0,27282,186860,223515,286668,358664,454121,462186,
#Deleted in new
chr6	16327723	16328281	chr6:16327723-16328281	1	-	16327723	16328281	789624	1	558,	0,
#Partially deleted in new
chr6	16432563	16750092	chr6:16432563-16750092	0	-	16432563	16432563	8553170	7	170,151,138,62,128,126,117,	0,382,53408,90063,153216,225212,317412,
#Partially deleted in new
chr6	16485134	16761460	chr6:16485134-16761460	0	-	16485134	16485134	8553170	6	975,62,128,126,115,163,	0,37492,100645,172641,268098,276163,
#Partially deleted in new
chr6	16614974	16753308	chr6:16614974-16753308	0	-	16614974	16614974	8553170	3	651,126,76,	0,42801,138258,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	16614978	16761370	chr6:16614978-16761370	0	-	16614978	16614978	8553170	6	1141,131,142,126,115,73,	0,37007,37876,42797,138254,146319,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	16666516	16761370	chr6:16666516-16761370	0	-	16666516	16666516	8553170	5	1036,115,49,107,73,	0,86716,87526,88123,94781,
#Partially deleted in new
chr6	16666967	16761456	chr6:16666967-16761456	0	-	16666967	16666967	8553170	2	585,159,	0,94330,
#Partially deleted in new
chr6	16736850	16761476	chr6:16736850-16761476	0	-	16736850	16736850	8553170	3	3068,115,179,	0,16382,24447,
#Partially deleted in new
chr6	16738464	16761491	chr6:16738464-16761491	0	-	16738464	16738464	8553170	2	1454,194,	0,22833,
#Partially deleted in new
chr6	16739601	16761463	chr6:16739601-16761463	0	-	16739601	16739601	8553170	4	317,115,49,166,	0,13631,14441,21696,
#Deleted in new
chr6	16752961	16761479	chr6:16752961-16761479	0	-	16752961	16752961	8553170	2	386,182,	0,8336,
#Deleted in new
chr6	16761137	16762652	chr6:16761137-16762652	3	+	16761137	16761137	789624	3	29,161,301,	0,981,1214,
#Deleted in new
chr6	16761911	16762618	chr6:16761911-16762618	0	+	16761911	16761911	8553170	2	368,267,	0,440,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	16764345	16766883	chr6:16764345-16766883	3	+	16764345	16764345	8553170	1	2538,	0,
#Partially deleted in new
chr6	17102257	17131372	chr6:17102257-17131372	3	+	17102257	17130881	789624	5	81,178,152,132,779,	0,12704,18349,26854,28336,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	17110494	17130675	chr6:17110494-17130675	0	+	17110823	17130675	789624	5	386,178,152,132,82,	0,4467,10112,18617,20099,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	17127937	17131372	chr6:17127937-17131372	0	+	17127937	17127937	8553170	2	1306,779,	0,2656,
#Partially deleted in new
chr6	17281345	17293875	chr6:17281345-17293875	3	+	17281581	17292119	789624	4	404,124,55,2120,	0,1459,3311,10410,
#Partially deleted in new
chr6	17281704	17293030	chr6:17281704-17293030	0	+	17281704	17290867	789624	5	45,124,55,45,1275,	0,1100,2952,9144,10051,
#Partially deleted in new
chr6	17282063	17292454	chr6:17282063-17292454	1	+	17282810	17292119	789624	4	156,124,55,699,	0,741,2593,9692,
#Partially deleted in new
chr6	17282336	17292136	chr6:17282336-17292136	0	+	17282336	17292119	789624	4	62,124,55,381,	0,468,2320,9419,
#Partially deleted in new
chr6	17282700	17293866	chr6:17282700-17293866	1	+	17282771	17292119	789624	3	228,55,2111,	0,1956,9055,
#Partially deleted in new
chr6	17283043	17292217	chr6:17283043-17292217	0	+	17283043	17283043	8553170	4	47,55,113,462,	0,1613,2009,8712,
#Deleted in new
chr6	17289854	17292763	chr6:17289854-17292763	0	+	17289854	17289854	8553170	2	214,1008,	0,1901,
#Deleted in new
chr6	17289968	17293023	chr6:17289968-17293023	0	+	17289968	17289968	8553170	3	100,45,1268,	0,880,1787,
#Deleted in new
chr6	17381366	17382120	chr6:17381366-17382120	7	+	17381366	17381366	16724991	1	754,	0,
#Partially deleted in new
chr6	17393215	17557792	chr6:17393215-17557792	3	+	17421555	17556442	789624	13	531,122,101,78,144,86,106,190,176,124,83,141,1434,	0,28339,33374,69780,113953,114425,120633,146053,147757,149621,149845,158248,163143,
#Partially deleted in new
chr6	17393504	17557790	chr6:17393504-17557790	1	+	17421555	17556442	789624	11	242,122,101,78,144,133,176,124,83,141,1432,	0,28050,33085,69491,113664,145821,147468,149332,149556,157959,162854,
#Partially deleted in new
chr6	17393594	17557790	chr6:17393594-17557790	1	+	17421555	17556442	789624	12	152,122,101,78,144,10,123,176,124,83,141,1432,	0,27960,32995,69401,113574,114046,145741,147378,149242,149466,157869,162764,
#Partially deleted in new
chr6	17393632	17556659	chr6:17393632-17556659	1	+	17421555	17556442	789624	10	114,122,101,78,190,176,124,83,141,301,	0,27922,32957,69363,145636,147340,149204,149428,157831,162726,
#Partially deleted in new
chr6	17393644	17556795	chr6:17393644-17556795	1	+	17421555	17556442	789624	12	102,122,101,144,86,106,190,176,124,83,141,437,	0,27910,32945,113524,113996,120204,145624,147328,149192,149416,157819,162714,
#Partially deleted in new
chr6	17393662	17556564	chr6:17393662-17556564	1	+	17421555	17556442	789624	7	84,122,101,124,83,141,206,	0,27892,32927,149174,149398,157801,162696,
#Partially deleted in new
chr6	17393711	17556568	chr6:17393711-17556568	1	+	17421555	17556442	789624	11	35,122,101,78,144,190,176,124,83,141,210,	0,27843,32878,69284,113457,145557,147261,149125,149349,157752,162647,
#Partially deleted in new
chr6	17393711	17551570	chr6:17393711-17551570	0	+	17421555	17536264	789624	12	35,122,101,144,86,106,104,190,176,124,83,107,	0,27843,32878,113457,113929,120137,142526,145557,147261,149125,149349,157752,
#Partially deleted in new
chr6	17393731	17539290	chr6:17393731-17539290	0	+	17421555	17493393	789624	9	15,122,101,78,217,144,86,106,22,	0,27823,32858,69264,99647,113437,113909,120117,145537,
#Partially deleted in new
chr6	17530898	17531652	chr6:17530898-17531652	7	-	17530898	17530898	16724991	1	754,	0,
#Deleted in new
chr6	17582033	17582305	chr6:17582033-17582305	7	+	17582033	17582033	16724991	1	272,	0,
#Partially deleted in new
chr6	17600354	17611719	chr6:17600354-17611719	3	+	17600409	17608339	789624	5	767,121,124,140,3525,	0,2235,4551,5519,7840,
#Partially deleted in new
chr6	17615034	17706834	chr6:17615034-17706834	1	-	17616096	17706387	0	21	1147,169,273,357,885,195,618,88,99,138,127,53,147,54,45,117,129,140,249,223,558,	0,1492,9526,10773,13620,17615,22118,31032,32772,34128,46618,46983,50204,53940,54258,54395,59870,60194,60487,73361,91242,
#Partially deleted in new
chr6	17615037	17706387	chr6:17615037-17706387	3	-	17616096	17706387	0	22	1144,169,273,357,885,195,618,126,88,99,138,127,53,147,54,45,117,129,140,249,223,111,	0,1489,9523,10770,13617,17612,22115,24901,31029,32769,34125,46615,46980,50201,53937,54255,54392,59867,60191,60484,73358,91239,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	17619532	17619634	chr6:17619532-17619634	3	+	17619532	17619532	8553170	1	102,	0,
#Deleted in new
chr6	17706256	17707344	chr6:17706256-17707344	3	+	17706256	17706256	789624	1	1088,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	17721785	17721903	chr6:17721785-17721903	7	-	17721785	17721785	16724991	1	118,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	17737457	17737556	chr6:17737457-17737556	3	-	17737457	17737457	8553170	1	99,	0,
#Partially deleted in new
chr6	17759182	17987463	chr6:17759182-17987463	1	-	17760856	17987463	789624	38	1695,792,152,106,48,78,153,93,177,125,56,127,100,147,133,152,174,162,150,141,163,214,167,87,131,135,111,213,112,113,135,88,181,93,61,13,91,55,	0,4972,12725,14295,15832,18094,19764,20409,21547,21994,24463,26332,28593,35066,35389,37486,40083,40769,45178,46292,49585,57837,66585,66855,69057,71918,74778,77695,78289,90194,91140,92772,96254,96847,114194,138985,227871,228226,
#Partially deleted in new
chr6	17759253	17794697	chr6:17759253-17794697	0	-	17760856	17794697	789624	16	1624,792,105,152,106,48,78,153,93,177,125,56,127,100,147,126,	0,4901,11860,12654,14224,15761,18023,19693,20338,21476,21923,24392,26261,28522,34995,35318,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr6	17763692	17987569	chr6:17763692-17987569	3	-	17764109	17987463	789624	39	1254,105,152,106,48,78,153,93,177,125,56,127,100,39,147,133,152,174,162,150,141,163,214,167,87,131,135,111,213,112,113,135,88,181,93,61,13,91,161,	0,7421,8215,9785,11322,13584,15254,15899,17037,17484,19953,21822,24083,26179,30556,30879,32976,35573,36259,40668,41782,45075,53327,62075,62345,64547,67408,70268,73185,73779,85684,86630,88262,91744,92337,109684,134475,223361,223716,
#Boundary problem: need 38, got 0, diff 38, mapped 0.0
chr6	17763694	17987482	chr6:17763694-17987482	1	-	17764109	17987463	789624	38	1252,152,106,48,78,153,93,177,125,56,127,100,39,147,133,152,174,162,150,141,163,214,167,87,131,135,111,213,112,113,135,88,181,93,61,13,91,74,	0,8213,9783,11320,13582,15252,15897,17035,17482,19951,21820,24081,26177,30554,30877,32974,35571,36257,40666,41780,45073,53325,62073,62343,64545,67406,70266,73183,73777,85682,86628,88260,91742,92335,109682,134473,223359,223714,
#Boundary problem: need 37, got 0, diff 37, mapped 0.0
chr6	17763694	17987481	chr6:17763694-17987481	1	-	17764109	17987463	789624	37	1252,152,106,48,78,153,93,177,125,56,127,100,147,133,152,174,162,150,141,163,214,167,87,131,135,111,213,112,113,135,88,181,93,61,13,91,73,	0,8213,9783,11320,13582,15252,15897,17035,17482,19951,21820,24081,30554,30877,32974,35571,36257,40666,41780,45073,53325,62073,62343,64545,67406,70266,73183,73777,85682,86628,88260,91742,92335,109682,134473,223359,223714,
#Partially deleted in new
chr6	17764109	17987463	chr6:17764109-17987463	1	-	17764109	17987463	789624	40	837,105,152,106,48,78,153,93,177,125,56,127,100,39,147,133,152,174,162,150,141,163,214,120,167,87,131,135,111,213,112,113,135,88,181,93,61,13,91,55,	0,7004,7798,9368,10905,13167,14837,15482,16620,17067,19536,21405,23666,25762,30139,30462,32559,35156,35842,40251,41365,44658,52910,57676,61658,61928,64130,66991,69851,72768,73362,85267,86213,87845,91327,91920,109267,134058,222944,223299,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr6	17770364	17817200	chr6:17770364-17817200	0	-	17771895	17817200	789624	21	1695,106,48,78,153,93,177,125,56,127,100,39,147,133,152,174,162,150,141,163,181,	0,3113,4650,6912,8582,9227,10365,10812,13281,15150,17411,19507,23884,24207,26304,28901,29587,33996,35110,38403,46655,
#Partially deleted in new
chr6	17780759	17796790	chr6:17780759-17796790	0	-	17780759	17796790	789624	7	147,125,56,127,100,133,122,	0,417,2886,4755,7016,13812,15909,
#Partially deleted in new
chr6	17785592	17795032	chr6:17785592-17795032	0	-	17785592	17785592	8553170	5	49,100,147,133,173,	0,2183,8656,8979,9267,
#Partially deleted in new
chr6	17812043	17817190	chr6:17812043-17817190	0	-	17812043	17812043	8553170	2	567,171,	0,4976,
#Partially deleted in new
chr6	17855476	17987551	chr6:17855476-17987551	0	-	17855476	17855476	8553170	5	141,93,61,91,143,	0,553,17900,131577,131932,
#Partially deleted in new
chr6	17873262	17987077	chr6:17873262-17987077	0	-	17873262	17873262	8553170	3	175,13,24,	0,24905,113791,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	17950405	17987623	chr6:17950405-17987623	1	-	17951362	17987463	789624	3	1024,91,215,	0,36648,37003,
#Deleted in new
chr6	17953571	17953930	chr6:17953571-17953930	7	+	17953571	17953571	16724991	1	359,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	18120439	18122687	chr6:18120439-18122687	3	-	18121418	18122606	789624	1	2248,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	18128310	18155074	chr6:18128310-18155074	3	-	18130667	18149127	0	9	2470,45,86,75,53,133,93,184,42,	0,3822,5493,10652,11354,15285,19512,20677,26722,
#Partially deleted in new
chr6	18155328	18222043	chr6:18155328-18222043	1	+	18215024	18221992	789624	4	85,123,153,135,	0,59678,62404,66580,
#Partially deleted in new
chr6	18155443	18222212	chr6:18155443-18222212	3	+	18159895	18221992	789624	22	128,44,100,128,90,112,117,39,211,185,177,75,138,172,128,132,78,117,126,123,153,304,	0,439,4439,5883,7391,10823,15919,30328,32348,35753,41613,42143,44995,46042,50093,51954,52685,57044,58212,59563,62289,66465,
#Partially deleted in new
chr6	18155451	18223853	chr6:18155451-18223853	1	+	18159895	18221992	789624	18	120,44,100,128,90,112,117,39,177,75,138,132,75,117,126,123,153,1945,	0,431,4431,5875,7383,10815,15911,30320,41605,42135,44987,51946,52680,57036,58204,59555,62281,66457,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	18211494	18223848	chr6:18211494-18223848	0	+	18211494	18211494	8553170	5	1110,126,123,148,1940,	0,2161,3512,6238,10414,
#Partially deleted in new
chr6	18223867	18264823	chr6:18223867-18264823	3	-	18225718	18263987	0	11	1863,69,149,136,189,121,95,110,102,154,439,	0,2306,12584,13513,25783,31863,32493,34085,34436,39975,40517,
#Partially deleted in new
chr6	18224216	18264548	chr6:18224216-18264548	0	-	18244507	18263987	789624	12	1514,69,145,136,96,189,121,95,110,102,154,164,	0,1957,12235,13164,20291,25434,31514,32144,33736,34087,39626,40168,
#Partially deleted in new
chr6	18225024	18264535	chr6:18225024-18264535	0	-	18225718	18263987	789624	12	60,120,69,149,136,189,121,95,79,49,154,151,	0,586,1149,11427,12356,24626,30706,31336,32928,33332,38818,39360,
#Partially deleted in new
chr6	18225469	18264541	chr6:18225469-18264541	1	-	18225718	18263987	0	10	261,69,149,136,189,121,95,110,154,157,	0,704,10982,11911,24181,30261,30891,32483,38373,38915,
#Partially deleted in new
chr6	18225878	18249740	chr6:18225878-18249740	0	-	18226146	18249740	789624	4	364,149,136,90,	0,10573,11502,23772,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	18237049	18256374	chr6:18237049-18256374	0	-	18237049	18237049	8553170	4	467,189,121,14,	0,12601,18681,19311,
#Partially deleted in new
chr6	18255735	18264541	chr6:18255735-18264541	0	-	18255735	18258349	789624	5	116,95,110,102,157,	0,625,2217,2568,8649,
#Partially deleted in new
chr6	18256372	18264208	chr6:18256372-18264208	0	-	18256372	18264002	789624	4	83,110,102,366,	0,1580,1931,7470,
#Partially deleted in new
chr6	18273164	18273266	chr6:18273164-18273266	3	-	18273164	18273164	8553170	1	102,	0,
#Deleted in new
chr6	18304853	18305045	chr6:18304853-18305045	7	-	18304853	18304853	16724991	1	192,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	18306972	18307079	chr6:18306972-18307079	3	-	18306972	18306972	8553170	1	107,	0,
#Deleted in new
chr6	18363416	18365423	chr6:18363416-18365423	7	-	18363416	18363416	16724991	1	2007,	0,
#Partially deleted in new
chr6	18366735	18368644	chr6:18366735-18368644	7	-	18366735	18366735	16724991	3	319,253,742,	0,765,1167,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	18387349	18468874	chr6:18387349-18468874	3	+	18399534	18465067	789624	8	281,201,105,61,205,145,90,3948,	0,12149,40231,52334,69805,72257,75941,77577,
#Partially deleted in new
chr6	18387513	18402095	chr6:18387513-18402095	0	+	18387513	18387513	8553170	3	117,201,139,	0,11985,14443,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	18522746	18674001	chr6:18522746-18674001	3	+	18522746	18522746	8553170	6	89,206,163,118,76,132,	0,13101,13425,68228,143195,151123,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	18571783	18571880	chr6:18571783-18571880	3	+	18571783	18571783	5263520	1	97,	0,
#Deleted in new
chr6	19143694	19144160	chr6:19143694-19144160	7	+	19143694	19143694	16724991	1	466,	0,
#Partially deleted in new
chr6	19290318	19321021	chr6:19290318-19321021	3	-	19290318	19290318	8553170	2	277,104,	0,30599,
#Deleted in new
chr6	19348180	19349076	chr6:19348180-19349076	7	+	19348180	19348180	16724991	1	896,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	19438282	19438418	chr6:19438282-19438418	7	+	19438282	19438282	16724991	1	136,	0,
#Partially deleted in new
chr6	19534943	19839080	chr6:19534943-19839080	1	-	19534943	19534943	8553170	5	86,157,185,103,263,	0,3369,3839,105537,303874,
#Deleted in new
chr6	19612754	19614036	chr6:19612754-19614036	7	+	19612754	19612754	16724991	1	1282,	0,
#Partially deleted in new
chr6	19638039	19638808	chr6:19638039-19638808	7	-	19638039	19638039	16724991	2	196,189,	0,580,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	19642424	19642529	chr6:19642424-19642529	3	-	19642424	19642424	8553170	1	105,	0,
#Partially deleted in new
chr6	19689824	19753113	chr6:19689824-19753113	2	-	19689824	19689824	8553170	3	50,111,30,	0,59823,63259,
#Partially deleted in new
chr6	19730426	19734567	chr6:19730426-19734567	0	-	19730426	19730426	8553170	2	353,117,	0,4024,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	19730431	19804787	chr6:19730431-19804787	1	-	19730431	19730431	8553170	7	291,70,145,104,111,70,113,	0,2973,4019,13599,19216,71655,74243,
#Partially deleted in new
chr6	19740176	19749693	chr6:19740176-19749693	0	-	19740176	19740176	8553170	3	62,104,46,	0,3854,9471,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	19802163	19804750	chr6:19802163-19804750	0	-	19802163	19802163	789624	3	1747,107,76,	0,2007,2511,
#Deleted in new
chr6	19803370	19804646	chr6:19803370-19804646	1	-	19803370	19803370	8553170	2	540,476,	0,800,
#Deleted in new
chr6	19803606	19804742	chr6:19803606-19804742	0	-	19803606	19803606	8553170	2	304,68,	0,1068,
#Deleted in new
chr6	19803679	19804752	chr6:19803679-19804752	0	-	19803679	19803679	8553170	3	231,107,78,	0,491,995,
#Deleted in new
chr6	19803715	19804368	chr6:19803715-19804368	0	-	19803715	19803715	8553170	2	195,198,	0,455,
#Deleted in new
chr6	19837385	19840684	chr6:19837385-19840684	3	+	19837754	19838628	789624	3	810,59,1475,	0,1198,1824,
#Deleted in new
chr6	20042454	20042940	chr6:20042454-20042940	7	-	20042454	20042454	16724991	1	486,	0,
#Partially deleted in new
chr6	20102144	20212399	chr6:20102144-20212399	3	-	20102285	20212234	789624	13	268,152,133,65,104,193,184,55,56,96,78,146,264,	0,7453,10731,13143,16292,22263,24372,26554,28999,42075,49040,50479,109991,
#Partially deleted in new
chr6	20212086	20317739	chr6:20212086-20317739	3	+	20212086	20212086	8553170	3	91,100,189,	0,82289,105464,
#Partially deleted in new
chr6	20401905	20493714	chr6:20401905-20493714	1	+	20402328	20490430	789624	5	465,6,112,152,3359,	0,469,77940,79318,88450,
#Partially deleted in new
chr6	20402166	20493715	chr6:20402166-20493715	3	+	20402232	20490430	789624	7	459,112,220,159,115,136,3548,	0,77679,79039,80595,84522,85946,88001,
#Partially deleted in new
chr6	20403678	20493714	chr6:20403678-20493714	1	+	20403814	20490430	789624	7	154,112,202,159,115,136,3547,	0,76167,77545,79083,83010,84434,86489,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	20421582	20421887	chr6:20421582-20421887	3	-	20421582	20421582	8553170	1	305,	0,
#Partially deleted in new
chr6	20437820	20440178	chr6:20437820-20440178	3	+	20437820	20437820	8553170	2	178,222,	0,2136,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	20452368	20452473	chr6:20452368-20452473	3	-	20452368	20452368	8553170	1	105,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	20500174	20500276	chr6:20500174-20500276	3	+	20500174	20500174	8553170	1	102,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr6	20534456	21232404	chr6:20534456-21232404	3	+	20546350	21231039	789624	16	118,44,178,113,85,97,49,121,104,167,146,181,63,84,165,1557,	0,894,11889,14136,114836,205062,224138,246688,311618,420962,465770,530591,573944,663564,666653,696391,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	20534480	20559672	chr6:20534480-20559672	1	+	20546350	20558549	789624	6	94,113,44,178,113,1131,	0,606,870,11865,14112,24061,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	20546340	21232404	chr6:20546340-21232404	1	+	20546350	21231039	789624	14	183,113,85,97,49,121,104,167,146,181,63,84,165,1557,	0,2252,102952,193178,212254,234804,299734,409078,453886,518707,562060,651680,654769,684507,
#Partially deleted in new
chr6	20722327	20723655	chr6:20722327-20723655	7	-	20722327	20722327	16724991	2	242,90,	0,1238,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	20756102	20800694	chr6:20756102-20800694	3	-	20756102	20756102	8553170	5	99,117,223,74,101,	0,549,16733,43642,44491,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	20993473	20993568	chr6:20993473-20993568	3	-	20993473	20993473	8553170	1	95,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	21200811	21231441	chr6:21200811-21231441	0	+	21200811	21200811	8553170	3	81,165,594,	0,298,30036,
#Deleted in new
chr6	21354410	21355296	chr6:21354410-21355296	3	-	21354410	21354410	8553170	2	191,195,	0,691,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	21486060	21511895	chr6:21486060-21511895	3	-	21486060	21486060	789624	4	469,91,70,360,	0,4147,16381,25475,
#Deleted in new
chr6	21521677	21523783	chr6:21521677-21523783	1	-	21521677	21521677	8553170	1	2106,	0,
#Deleted in new
chr6	21522475	21523772	chr6:21522475-21523772	3	-	21522475	21522475	8553170	2	365,178,	0,1119,
#Partially deleted in new
chr6	21528738	21595593	chr6:21528738-21595593	3	-	21528738	21528738	8553170	3	1484,128,168,	0,10158,66687,
#Deleted in new
chr6	21592767	21598619	chr6:21592767-21598619	3	+	21594534	21595959	789624	1	5852,	0,
#Deleted in new
chr6	21602127	21602383	chr6:21602127-21602383	7	+	21602127	21602127	16724991	1	256,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	21664771	21909837	chr6:21664771-21909837	1	+	21664771	21664771	8553170	7	242,80,253,126,142,77,368,	0,1794,3875,78145,93621,118860,244698,
#Deleted in new
chr6	21822535	21822737	chr6:21822535-21822737	3	+	21822535	21822535	8553170	1	202,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	22063105	22222457	chr6:22063105-22222457	1	+	22063105	22063105	8553170	3	135,174,865,	0,47641,158487,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	22085543	22085918	chr6:22085543-22085918	3	+	22085543	22085543	8553170	1	375,	0,
#Partially deleted in new
chr6	22134956	22147193	chr6:22134956-22147193	3	-	22134956	22134956	789624	3	1713,73,154,	0,11722,12083,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	22146653	22197219	chr6:22146653-22197219	1	+	22146653	22146653	8553170	4	639,65,90,3175,	0,27344,44913,47391,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	22146884	22368328	chr6:22146884-22368328	1	+	22146884	22146884	8553170	11	186,96,163,111,53,83,94,192,265,91,115,	0,109489,113451,143993,169942,170831,189964,196662,202344,205676,221329,
#Deleted in new
chr6	22147207	22151668	chr6:22147207-22151668	1	+	22147207	22147207	8553170	1	4461,	0,
#Partially deleted in new
chr6	22213305	22214237	chr6:22213305-22214237	7	-	22213305	22213305	16724991	2	440,164,	0,768,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	22220780	22222395	chr6:22220780-22222395	3	+	22220780	22220780	8553170	1	1615,	0,
#Partially deleted in new
chr6	22287243	22297501	chr6:22287243-22297501	1	-	22287401	22296982	789624	6	350,180,108,46,37,547,	0,2930,5294,7165,7304,9711,
#Partially deleted in new
chr6	22287243	22297501	chr6:22287243-22297501	1	-	22287401	22296982	789624	5	350,180,108,179,547,	0,2930,5294,7165,9711,
#Partially deleted in new
chr6	22287250	22297501	chr6:22287250-22297501	3	-	22287401	22296982	0	5	343,180,108,176,547,	0,2923,5287,7158,9704,
#Deleted in new
chr6	22569492	22571666	chr6:22569492-22571666	3	+	22569575	22570331	789624	1	2174,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	22589136	22593833	chr6:22589136-22593833	3	-	22589136	22589136	8553170	3	469,154,120,	0,3297,4577,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	22744394	23031780	chr6:22744394-23031780	3	-	22744394	22744394	8553170	3	674,96,101,	0,272330,287285,
#Deleted in new
chr6	23102679	23103546	chr6:23102679-23103546	7	+	23102679	23102679	16724991	1	867,	0,
#Partially deleted in new
chr6	23337710	23346560	chr6:23337710-23346560	3	+	23337710	23337710	8553170	4	86,110,71,45,	0,4024,7239,8805,
#Partially deleted in new
chr6	23649495	23649774	chr6:23649495-23649774	7	+	23649495	23649495	16724991	1	279,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	23854443	23855457	chr6:23854443-23855457	7	+	23854443	23854443	16724991	1	1014,	0,
#Deleted in new
chr6	23856697	23856818	chr6:23856697-23856818	7	-	23856697	23856697	16724991	1	121,	0,
#Deleted in new
chr6	23971878	23972941	chr6:23971878-23972941	7	+	23971878	23971878	16724991	1	1063,	0,
#Deleted in new
chr6	24001823	24002433	chr6:24001823-24002433	7	+	24001823	24001823	16724991	1	610,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	24126121	24147411	chr6:24126121-24147411	1	+	24134327	24145946	789624	4	219,73,198,1864,	0,2006,8197,19426,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	24126185	24147529	chr6:24126185-24147529	3	+	24134327	24145946	789624	4	155,73,198,1982,	0,1942,8133,19362,
#Deleted in new
chr6	24126210	24129697	chr6:24126210-24129697	0	+	24126210	24126210	8553170	3	130,73,393,	0,1917,3094,
#Deleted in new
chr6	24126230	24129312	chr6:24126230-24129312	0	+	24126230	24126230	8553170	3	110,73,596,	0,1897,2486,
#Partially deleted in new
chr6	24126239	24145876	chr6:24126239-24145876	0	+	24134327	24145876	789624	4	101,73,198,329,	0,1888,8079,19308,
#Partially deleted in new
chr6	24128142	24154900	chr6:24128142-24154900	0	+	24128142	24128142	8553170	3	58,198,130,	0,6176,26628,
#Partially deleted in new
chr6	24134316	24141523	chr6:24134316-24141523	1	+	24134327	24141175	789624	2	200,600,	0,6607,
#Deleted in new
chr6	24166272	24166374	chr6:24166272-24166374	3	+	24166272	24166272	8553170	1	102,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	24171755	24205303	chr6:24171755-24205303	1	-	24174729	24205283	0	3	3079,303,302,	0,6574,33246,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	24171755	24358052	chr6:24171755-24358052	3	-	24174729	24357750	0	10	3079,303,101,163,55,147,132,77,55,595,	0,6574,33246,106293,117096,119176,129959,130212,181813,185702,
#Partially deleted in new
chr6	24353231	24357653	chr6:24353231-24357653	0	-	24353304	24357653	789624	3	88,55,196,	0,337,4226,
#Deleted in new
chr6	24356902	24358284	chr6:24356902-24358284	3	+	24357639	24357894	789624	1	1382,	0,
#Deleted in new
chr6	24365650	24365754	chr6:24365650-24365754	3	+	24365650	24365650	8553170	1	104,	0,
#Partially deleted in new
chr6	24402907	24426194	chr6:24402907-24426194	1	+	24403046	24423694	789624	9	329,74,174,131,117,153,118,114,2611,	0,2260,9314,12125,13489,15176,15553,20029,20676,
#Partially deleted in new
chr6	24402907	24426194	chr6:24402907-24426194	1	+	24403046	24423694	789624	12	329,74,37,113,73,110,131,117,153,118,114,2611,	0,2260,5500,6553,7819,9378,12125,13489,15176,15553,20029,20676,
#Partially deleted in new
chr6	24402953	24423476	chr6:24402953-24423476	1	+	24403046	24423056	789624	10	283,74,37,113,174,131,117,153,118,540,	0,2214,5454,6507,9268,12079,13443,15130,15507,19983,
#Partially deleted in new
chr6	24402953	24425582	chr6:24402953-24425582	3	+	24403046	24423694	789624	11	283,74,37,113,174,131,117,153,118,114,1999,	0,2214,5454,6507,9268,12079,13443,15130,15507,19983,20630,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	24402953	24419241	chr6:24402953-24419241	0	+	24402953	24402953	8553170	8	283,74,37,174,131,117,153,781,	0,2214,5454,9268,12079,13443,15130,15507,
#Partially deleted in new
chr6	24403191	24418561	chr6:24403191-24418561	0	+	24403191	24418561	789624	7	45,74,37,33,103,153,101,	0,1976,5216,6269,13219,14892,15269,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	24424564	24435880	chr6:24424564-24435880	0	-	24424564	24424564	8553170	5	418,144,51,196,64,	0,4410,8622,8798,11252,
#Partially deleted in new
chr6	24428176	24489622	chr6:24428176-24489622	3	-	24429031	24489511	789624	25	942,51,27,161,177,94,106,142,157,75,111,187,140,121,66,140,28,108,55,49,111,98,79,56,208,	0,5010,5186,8399,8936,17369,17549,18661,19700,19957,21612,25838,28321,32102,34553,38503,38735,38990,44405,45442,46944,48004,51704,57898,61238,
#Partially deleted in new
chr6	24466695	24495205	chr6:24466695-24495205	0	-	24466695	24466695	8553170	11	124,28,108,55,49,111,98,79,56,83,239,	0,216,471,5886,6923,8425,9485,13185,19379,22719,28271,
#Partially deleted in new
chr6	24473078	24489571	chr6:24473078-24489571	0	-	24473078	24473078	8553170	6	589,111,98,79,56,157,	0,2042,3102,6802,12996,16336,
#Partially deleted in new
chr6	24473424	24489579	chr6:24473424-24489579	0	-	24473424	24473424	8553170	5	243,111,98,79,165,	0,1696,2756,6456,15990,
#Partially deleted in new
chr6	24475120	24495199	chr6:24475120-24495199	0	-	24475120	24475120	8553170	5	111,98,79,83,233,	0,1060,4760,14294,19846,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	24494851	24537207	chr6:24494851-24537207	1	+	24494996	24533712	0	10	499,84,171,117,144,144,159,170,59,3701,	0,7671,8411,10017,20315,25549,27915,33145,37267,38655,
#Partially deleted in new
chr6	24494866	24533757	chr6:24494866-24533757	1	+	24494996	24533712	789624	9	484,171,117,144,144,159,170,59,251,	0,8396,10002,20300,25534,27900,33130,37252,38640,
#Partially deleted in new
chr6	24522637	24534057	chr6:24522637-24534057	0	+	24522637	24522637	8553170	4	288,170,59,551,	0,5359,9481,10869,
#Deleted in new
chr6	24532009	24533808	chr6:24532009-24533808	0	+	24532009	24532009	8553170	2	168,302,	0,1497,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr6	24544103	24646021	chr6:24544103-24646021	1	-	24547164	24596538	0	20	3240,92,91,123,143,160,139,152,149,133,124,229,133,93,88,98,99,193,746,395,	0,7330,10437,12503,14909,19255,20098,22493,24677,25799,28471,32264,34006,35754,36822,38145,39500,44489,51769,101523,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr6	24544103	24646155	chr6:24544103-24646155	1	-	24547164	24600646	0	22	3240,92,91,123,143,160,139,152,149,133,124,229,133,93,88,98,99,193,746,91,160,420,	0,7330,10437,12503,14909,19255,20098,22493,24677,25799,28471,32264,34006,35754,36822,38145,39500,44489,51769,56515,56945,101632,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr6	24544103	24646155	chr6:24544103-24646155	1	-	24547164	24601103	0	19	3240,123,143,160,139,152,149,133,124,229,133,93,88,98,99,193,746,160,420,	0,12503,14909,19255,20098,22493,24677,25799,28471,32264,34006,35754,36822,38145,39500,44489,51769,56945,101632,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr6	24544103	24583227	chr6:24544103-24583227	1	-	24547164	24576373	789624	17	3240,92,91,123,143,160,139,152,149,133,85,229,133,93,88,98,167,	0,7330,10437,12503,14909,19255,20098,22493,24677,25799,28471,32264,34006,35754,36822,38145,38957,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr6	24544106	24646155	chr6:24544106-24646155	3	-	24547164	24601103	0	21	3237,92,91,123,143,160,139,152,149,133,124,229,133,93,88,98,99,193,746,160,420,	0,7327,10434,12500,14906,19252,20095,22490,24674,25796,28468,32261,34003,35751,36819,38142,39497,44486,51766,56942,101629,
#Partially deleted in new
chr6	24545421	24646012	chr6:24545421-24646012	1	-	24547164	24601103	0	22	1922,92,91,123,143,160,139,152,149,133,124,229,133,93,88,98,99,193,746,160,131,116,	0,6012,9119,11185,13591,17937,18780,21175,23359,24481,27153,30946,32688,34436,35504,36827,38182,43171,50451,55627,100314,100475,
#Partially deleted in new
chr6	24598011	24599790	chr6:24598011-24599790	7	+	24598011	24598011	16724991	2	580,878,	0,901,
#Partially deleted in new
chr6	24649976	24667033	chr6:24649976-24667033	3	-	24650787	24666862	0	7	1093,171,119,92,174,86,336,	0,3006,4435,7835,8584,16549,16721,
#Partially deleted in new
chr6	24649978	24666591	chr6:24649978-24666591	1	-	24650787	24666195	789624	6	1091,171,119,92,174,473,	0,3004,4433,7833,8582,16140,
#Partially deleted in new
chr6	24650986	24666930	chr6:24650986-24666930	0	-	24650986	24650986	8553170	4	83,171,86,233,	0,1996,15539,15711,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	24654377	24659172	chr6:24654377-24659172	0	-	24654377	24654377	8553170	3	153,92,612,	0,3434,4183,
#Deleted in new
chr6	24665986	24666786	chr6:24665986-24666786	0	-	24665986	24665986	8553170	2	625,89,	0,711,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	24667034	24705065	chr6:24667034-24705065	1	+	24687681	24701615	0	4	310,289,185,3607,	0,20370,30848,34424,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	24667070	24705046	chr6:24667070-24705046	3	+	24667263	24701615	0	3	274,185,3588,	0,30812,34388,
#Partially deleted in new
chr6	24687401	24701714	chr6:24687401-24701714	0	+	24687401	24687401	8553170	3	292,185,256,	0,10481,14057,
#Deleted in new
chr6	24700906	24701793	chr6:24700906-24701793	3	-	24700906	24700906	8553170	1	887,	0,
#Partially deleted in new
chr6	24704860	24720836	chr6:24704860-24720836	3	-	24706136	24718668	789624	5	1402,135,123,177,2297,	0,3916,9457,11287,13679,
#Partially deleted in new
chr6	24706095	24719998	chr6:24706095-24719998	1	-	24706136	24719901	789624	5	167,135,123,177,139,	0,2681,8222,10052,13764,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	24706746	24707151	chr6:24706746-24707151	3	+	24706746	24706746	8553170	1	405,	0,
#Partially deleted in new
chr6	24742301	24751921	chr6:24742301-24751921	3	+	24742301	24742301	8553170	3	45,153,357,	0,6694,9263,
#Partially deleted in new
chr6	24749066	24751689	chr6:24749066-24751689	0	+	24749066	24749066	8553170	2	82,127,	0,2496,
#Partially deleted in new
chr6	24750670	24751625	chr6:24750670-24751625	7	-	24750670	24750670	16724991	2	195,367,	0,588,
#Partially deleted in new
chr6	24774930	24786095	chr6:24774930-24786095	3	+	24777246	24785799	0	7	182,76,78,145,83,111,458,	0,2291,5732,6546,9156,9513,10707,
#Partially deleted in new
chr6	24774937	24786099	chr6:24774937-24786099	1	+	24777246	24785799	0	7	307,76,78,145,83,111,462,	0,2284,5725,6539,9149,9506,10700,
#Partially deleted in new
chr6	24774948	24777736	chr6:24774948-24777736	0	+	24774948	24774948	8553170	2	164,515,	0,2273,
#Partially deleted in new
chr6	24775412	24785707	chr6:24775412-24785707	0	+	24777246	24785707	789624	7	90,76,78,145,83,111,70,	0,1809,5250,6064,8674,9031,10225,
#Partially deleted in new
chr6	24775412	24786093	chr6:24775412-24786093	1	+	24777246	24785799	0	7	90,76,78,145,83,111,456,	0,1809,5250,6064,8674,9031,10225,
#Partially deleted in new
chr6	24775466	24781544	chr6:24775466-24781544	0	+	24777246	24781544	789624	4	358,76,78,68,	0,1755,5196,6010,
#Partially deleted in new
chr6	24776865	24784119	chr6:24776865-24784119	0	+	24777246	24784119	789624	4	432,78,145,33,	0,3797,4611,7221,
#Partially deleted in new
chr6	24797320	24798889	chr6:24797320-24798889	3	-	24797409	24798857	789624	2	517,297,	0,1272,
#Partially deleted in new
chr6	24797372	24809798	chr6:24797372-24809798	3	-	24806372	24809798	789624	3	465,107,82,	0,8994,12344,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr6	24804280	24911170	chr6:24804280-24911170	1	-	24806372	24875791	789624	23	2193,91,84,203,159,162,136,169,182,693,150,130,149,126,44,64,150,54,24,79,156,127,353,	0,5436,14261,20945,23856,26228,27975,31422,34810,38581,43261,43744,45521,46316,48294,56692,61020,64813,66585,68600,69363,71410,106537,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr6	24804281	24936052	chr6:24804281-24936052	3	-	24806372	24875791	789624	23	2192,91,84,203,159,162,136,169,182,693,150,130,149,126,44,64,150,54,24,79,156,127,215,	0,5435,14260,20944,23855,26227,27974,31421,34809,38580,43260,43743,45520,46315,48293,56691,61019,64812,66584,68599,69362,71409,131556,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr6	24804283	24911048	chr6:24804283-24911048	1	-	24806372	24875791	789624	23	2190,91,84,203,159,162,136,169,182,693,150,130,149,126,44,64,150,54,24,79,156,127,231,	0,5433,14258,20942,23853,26225,27972,31419,34807,38578,43258,43741,45518,46313,48291,56689,61017,64810,66582,68597,69360,71407,106534,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr6	24804324	24910711	chr6:24804324-24910711	1	-	24806372	24875791	789624	22	2149,91,84,203,159,162,136,169,182,693,130,149,126,44,64,150,54,24,79,156,127,164,	0,5392,14217,20901,23812,26184,27931,31378,34766,38537,43700,45477,46272,48250,56648,60976,64769,66541,68556,69319,71366,106223,
#Partially deleted in new
chr6	24806322	24936052	chr6:24806322-24936052	1	-	24806372	24935898	789624	22	151,91,84,203,159,162,136,169,182,693,130,149,126,44,64,150,54,24,79,156,127,215,	0,3394,12219,18903,21814,24186,25933,29380,32768,36539,41702,43479,44274,46252,54650,58978,62771,64543,66558,67321,69368,129515,
#Partially deleted in new
chr6	24828138	24836050	chr6:24828138-24836050	0	-	24828138	24828138	8553170	4	157,162,136,348,	0,2370,4117,7564,
#Partially deleted in new
chr6	24839358	24877355	chr6:24839358-24877355	1	-	24839593	24875791	789624	14	241,693,130,149,126,44,64,150,54,24,79,156,127,405,	0,3503,8666,10443,11238,13216,21614,25942,29735,31507,33522,34285,36332,37592,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	24839358	25042018	chr6:24839358-25042018	1	-	24840703	25041926	789624	14	1417,693,130,149,126,44,64,150,54,24,79,156,127,168,	0,3503,8666,10443,11238,13216,21614,25942,29735,31507,33522,34285,36332,202492,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	24839372	24877365	chr6:24839372-24877365	1	-	24840703	24875791	789624	14	1403,693,130,149,126,44,64,150,54,24,79,156,127,415,	0,3489,8652,10429,11224,13202,21600,25928,29721,31493,33508,34271,36318,37578,
#Partially deleted in new
chr6	24839427	24910703	chr6:24839427-24910703	1	-	24839593	24875791	789624	14	172,693,130,149,126,44,64,150,54,24,79,156,127,156,	0,3434,8597,10374,11169,13147,21545,25873,29666,31438,33453,34216,36263,71120,
#Partially deleted in new
chr6	24839441	24911063	chr6:24839441-24911063	1	-	24839593	24875791	789624	14	158,693,130,149,126,44,64,150,54,24,79,156,127,246,	0,3420,8583,10360,11155,13133,21531,25859,29652,31424,33439,34202,36249,71376,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	24839978	24935948	chr6:24839978-24935948	1	-	24840703	24935898	789624	14	797,693,130,149,126,44,64,150,54,24,79,156,127,111,	0,2883,8046,9823,10618,12596,20994,25322,29115,30887,32902,33665,35712,95859,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	24839993	24910885	chr6:24839993-24910885	1	-	24840703	24875791	789624	14	782,693,130,149,126,44,64,150,54,24,79,156,127,68,	0,2868,8031,9808,10603,12581,20979,25307,29100,30872,32887,33650,35697,70824,
#Partially deleted in new
chr6	24840271	24843136	chr6:24840271-24843136	0	-	24840271	24840271	8553170	2	504,275,	0,2590,
#Partially deleted in new
chr6	24840296	24911070	chr6:24840296-24911070	1	-	24840703	24875791	789624	15	479,693,150,130,149,126,44,64,150,54,24,79,156,127,253,	0,2565,7245,7728,9505,10300,12278,20676,25004,28797,30569,32584,33347,35394,70521,
#Partially deleted in new
chr6	24873643	24931997	chr6:24873643-24931997	0	-	24873643	24875791	789624	4	156,127,166,106,	0,2047,55638,58248,
#Partially deleted in new
chr6	24875709	24931997	chr6:24875709-24931997	0	-	24875709	24875791	789624	4	108,166,166,106,	0,22691,53572,56182,
#Deleted in new
chr6	24947879	24948344	chr6:24947879-24948344	7	+	24947879	24947879	16724991	1	465,	0,
#Deleted in new
chr6	24976418	24976982	chr6:24976418-24976982	7	+	24976418	24976418	16724991	2	70,429,	0,135,
#Partially deleted in new
chr6	25014951	25042170	chr6:25014951-25042170	0	-	25014951	25014951	8553170	3	632,78,320,	0,806,26899,
#Deleted in new
chr6	25023246	25024483	chr6:25023246-25024483	7	-	25023246	25023246	16724991	1	1237,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	25031008	25031287	chr6:25031008-25031287	3	-	25031008	25031008	8553170	1	279,	0,
#Partially deleted in new
chr6	25041838	25056664	chr6:25041838-25056664	3	+	25041838	25041838	8553170	3	78,153,346,	0,13124,14480,
#Partially deleted in new
chr6	25061625	25081873	chr6:25061625-25081873	5	-	25061625	25061625	16724991	6	255,188,103,104,322,355,	0,847,1854,4197,19073,19893,
#Partially deleted in new
chr6	25081067	25084785	chr6:25081067-25084785	4	-	25081067	25081067	16724991	2	812,306,	0,3412,
#Partially deleted in new
chr6	25081108	25452184	chr6:25081108-25452184	6	-	25081108	25081108	16724991	16	771,97,116,117,175,141,136,138,82,148,191,110,204,134,82,148,	0,3371,5675,10787,12405,15952,25250,27467,28391,28847,32483,33882,56511,288837,339193,370928,
#Partially deleted in new
chr6	25081569	25138593	chr6:25081569-25138593	4	-	25081569	25081569	16724991	14	89,97,116,117,175,141,136,138,82,148,191,110,204,520,	0,2910,5214,10326,11944,15491,24789,27006,27930,28386,32022,33421,56050,56504,
#Partially deleted in new
chr6	25081802	25106450	chr6:25081802-25106450	4	-	25081802	25081802	16724991	7	77,97,180,116,175,141,92,	0,2677,2850,4981,11711,15258,24556,
#Partially deleted in new
chr6	25081861	25138081	chr6:25081861-25138081	5	-	25081861	25081861	16724991	14	18,97,116,117,175,141,136,138,82,148,191,110,204,8,	0,2618,4922,10034,11652,15199,24497,26714,27638,28094,31730,33129,55758,56212,
#Partially deleted in new
chr6	25086616	25108682	chr6:25086616-25108682	4	-	25086616	25086616	16724991	6	283,117,175,141,136,107,	0,5279,6897,10444,19742,21959,
#Deleted in new
chr6	25105811	25109526	chr6:25105811-25109526	4	-	25105811	25105811	16724991	3	718,138,27,	0,2764,3688,
#Partially deleted in new
chr6	25107829	25232608	chr6:25107829-25232608	4	-	25107829	25107829	16724991	11	59,138,82,148,191,110,97,204,60,98,129,	0,746,1670,2126,5762,7161,11304,29790,58460,59465,124650,
#Partially deleted in new
chr6	25108613	25166555	chr6:25108613-25166555	4	-	25108613	25108613	16724991	7	100,82,148,191,110,204,266,	0,886,1342,4978,6377,29006,57676,
#Partially deleted in new
chr6	25127545	25138329	chr6:25127545-25138329	4	-	25127545	25127545	16724991	3	312,204,256,	0,10074,10528,
#Deleted in new
chr6	25140002	25141403	chr6:25140002-25141403	7	+	25140002	25140002	16724991	1	1401,	0,
#Deleted in new
chr6	25152546	25152883	chr6:25152546-25152883	7	+	25152546	25152546	16724991	1	337,	0,
#Deleted in new
chr6	25181358	25181745	chr6:25181358-25181745	7	+	25181358	25181358	16724991	1	387,	0,
#Deleted in new
chr6	25218687	25219069	chr6:25218687-25219069	7	+	25218687	25218687	16724991	1	382,	0,
#Deleted in new
chr6	25248262	25248779	chr6:25248262-25248779	7	+	25248262	25248262	16724991	1	517,	0,
#Deleted in new
chr6	25261238	25261731	chr6:25261238-25261731	7	+	25261238	25261238	16724991	1	493,	0,
#Partially deleted in new
chr6	25272199	25273751	chr6:25272199-25273751	7	-	25272199	25272199	16724991	3	507,94,326,	0,807,1226,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	25279077	25452597	chr6:25279077-25452597	1	+	25435482	25452269	789624	9	162,98,51,60,122,98,71,74,554,	0,5734,141036,147423,156405,170820,171261,171560,172966,
#Partially deleted in new
chr6	25279427	25620530	chr6:25279427-25620530	3	+	25279795	25619583	0	37	408,98,51,60,122,98,71,74,76,89,95,87,104,78,77,105,70,82,100,55,173,69,94,99,129,132,176,88,150,67,197,113,433,82,213,132,1084,	0,5384,140686,147073,156055,170470,170911,171210,186445,191741,192999,202829,209054,212304,212520,215683,220738,230228,231079,231280,236247,237919,240816,249367,258427,260519,271482,274581,277273,301496,301815,314987,320886,325384,326633,330622,340019,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	25287431	25287533	chr6:25287431-25287533	3	-	25287431	25287431	8553170	1	102,	0,
#Partially deleted in new
chr6	25350606	25452190	chr6:25350606-25452190	4	-	25350606	25350606	16724991	4	211,134,82,154,	0,19339,69695,101430,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	25383598	25383702	chr6:25383598-25383702	3	+	25383598	25383598	8553170	1	104,	0,
#Partially deleted in new
chr6	25432906	25452263	chr6:25432906-25452263	5	-	25432906	25432906	16724991	2	320,227,	0,19130,
#Partially deleted in new
chr6	25465535	25472631	chr6:25465535-25472631	0	+	25465535	25465535	8553170	3	413,89,205,	0,5633,6891,
#Partially deleted in new
chr6	25495120	25619693	chr6:25495120-25619693	0	+	25495120	25612396	789624	26	95,70,12,82,100,55,173,69,94,99,129,132,176,88,150,18,67,197,113,433,82,213,132,25,150,247,	0,5045,12358,14535,15386,15587,20554,22226,25123,33674,42734,44826,55789,58888,61580,81855,85803,86122,99294,105193,109691,110940,114929,117256,117616,124326,
#Partially deleted in new
chr6	25610121	25620530	chr6:25610121-25620530	0	+	25610121	25610121	8553170	3	60,147,1084,	0,2618,9325,
#Partially deleted in new
chr6	25652200	25701774	chr6:25652200-25701774	1	+	25652403	25661619	789624	10	285,93,90,57,78,56,46,60,69,568,	0,9351,12742,17310,17798,29750,36971,37272,38855,49006,
#Partially deleted in new
chr6	25652235	25701783	chr6:25652235-25701783	3	+	25652403	25701335	789624	11	250,71,93,90,57,78,56,46,60,69,577,	0,1146,9316,12707,17275,17763,29715,36936,37237,38820,48971,
#Partially deleted in new
chr6	25652403	25701335	chr6:25652403-25701335	1	+	25652403	25661619	789624	9	82,93,90,57,78,46,60,69,129,	0,9148,12539,17107,17595,36768,37069,38652,48803,
#Deleted in new
chr6	25678768	25679164	chr6:25678768-25679164	7	-	25678768	25678768	16724991	1	396,	0,
#Deleted in new
chr6	25726131	25726527	chr6:25726131-25726527	3	-	25726131	25726527	0	1	396,	0,
#Deleted in new
chr6	25726776	25727292	chr6:25726776-25727292	3	+	25726908	25727292	0	1	516,	0,
#Deleted in new
chr6	25731781	25732091	chr6:25731781-25732091	7	-	25731781	25731781	16724991	1	310,	0,
#Deleted in new
chr6	25732496	25732827	chr6:25732496-25732827	7	+	25732496	25732496	16724991	1	331,	0,
#Partially deleted in new
chr6	25754698	25781191	chr6:25754698-25781191	3	+	25761962	25779188	789624	12	83,127,206,234,88,87,119,162,133,148,91,2138,	0,7228,14286,15368,15685,16227,18576,18814,21896,22113,23227,24355,
#Partially deleted in new
chr6	25754698	25781174	chr6:25754698-25781174	1	+	25769055	25779188	789624	13	83,127,100,206,234,88,87,119,162,133,148,91,2121,	0,7228,13637,14286,15368,15685,16227,18576,18814,21896,22113,23227,24355,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	25761922	25779500	chr6:25761922-25779500	1	+	25769055	25776963	789624	7	131,100,206,162,1194,91,447,	0,6413,7062,11590,14672,16003,17131,
#Partially deleted in new
chr6	25782896	25832059	chr6:25782896-25832059	3	-	25798784	25830557	789624	13	322,137,91,148,133,162,119,87,88,234,173,84,66,	0,15886,17993,28501,28741,29934,30198,36171,36614,36785,43564,47627,49097,
#Partially deleted in new
chr6	25783125	25831996	chr6:25783125-25831996	0	-	25812978	25830557	789624	12	93,137,91,148,133,162,87,88,234,173,84,3,	0,15657,17764,28272,28512,29705,35942,36385,36556,43335,47398,48868,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	25798582	25832041	chr6:25798582-25832041	1	-	25798784	25830557	789624	12	337,91,148,133,162,119,87,88,234,173,84,48,	0,2307,12815,13055,14248,14512,20485,20928,21099,27878,31941,33411,
#Partially deleted in new
chr6	25798784	25830557	chr6:25798784-25830557	1	-	25798784	25830557	789624	10	135,91,148,133,119,87,88,234,173,34,	0,2105,12613,12853,14310,20283,20726,20897,27676,31739,
#Partially deleted in new
chr6	25833065	25849877	chr6:25833065-25849877	0	-	25845381	25849877	789624	4	298,137,91,73,	0,12314,16308,16739,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	25841304	25849394	chr6:25841304-25849394	0	-	25845381	25849394	789624	3	503,137,21,	0,4075,8069,
#Partially deleted in new
chr6	25844855	25874243	chr6:25844855-25874243	3	-	25845381	25868387	789624	13	443,137,91,148,130,162,119,87,88,234,212,124,77,	0,524,4518,4949,5192,5603,5903,10288,16768,16940,17377,23441,29311,
#Partially deleted in new
chr6	25845099	25882286	chr6:25845099-25882286	1	-	25845381	25868387	789624	12	199,137,91,148,130,162,119,87,88,212,124,253,	0,280,4274,4705,4948,5359,5659,10044,16524,17133,23197,36934,
#Partially deleted in new
chr6	25845099	25874212	chr6:25845099-25874212	1	-	25845381	25868387	789624	12	199,137,91,148,130,162,119,87,88,212,124,46,	0,280,4274,4705,4948,5359,5659,10044,16524,17133,23197,29067,
#Partially deleted in new
chr6	25849813	25868489	chr6:25849813-25868489	0	-	25849813	25849813	8553170	6	139,830,87,88,212,193,	0,234,5330,11810,12419,18483,
#Partially deleted in new
chr6	25849912	25874235	chr6:25849912-25874235	0	-	25855194	25868387	789624	6	40,830,87,212,124,69,	0,135,5231,12320,18384,24254,
#Partially deleted in new
chr6	25850177	25874238	chr6:25850177-25874238	0	-	25850177	25850177	8553170	7	443,119,87,88,212,124,72,	0,581,4966,11446,12055,18119,23989,
#Partially deleted in new
chr6	25850524	25868460	chr6:25850524-25868460	0	-	25850524	25850524	8553170	6	353,87,88,234,212,164,	0,4619,11099,11271,11708,17772,
#Partially deleted in new
chr6	25850772	25868455	chr6:25850772-25868455	0	-	25855194	25868387	789624	4	105,87,212,159,	0,4371,11460,17524,
#Deleted in new
chr6	25882025	25882395	chr6:25882025-25882395	7	-	25882025	25882025	16724991	1	370,	0,
#Deleted in new
chr6	25885418	25885751	chr6:25885418-25885751	7	+	25885418	25885418	16724991	1	333,	0,
#Partially deleted in new
chr6	25912753	25930611	chr6:25912753-25930611	1	-	25913294	25925796	789624	11	698,91,133,162,119,87,88,234,212,111,335,	0,1826,2982,3931,4215,5733,8252,8425,10941,13015,17523,
#Partially deleted in new
chr6	25912762	25930726	chr6:25912762-25930726	3	-	25913316	25925796	789624	12	689,91,148,133,162,119,87,88,234,212,111,450,	0,1817,2736,2973,3922,4206,5724,8243,8416,10932,13006,17514,
#Partially deleted in new
chr6	25913316	25925817	chr6:25913316-25925817	1	-	25914561	25925796	789624	11	135,126,148,133,162,119,87,88,234,212,49,	0,1228,2182,2419,3368,3652,5170,7689,7862,10378,12452,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	25962801	25991226	chr6:25962801-25991226	3	+	25966522	25983687	789624	8	54,234,599,96,231,23,113,8063,	0,247,3533,6523,9067,10252,10371,20362,
#Partially deleted in new
chr6	25983811	25999167	chr6:25983811-25999167	3	-	25983811	25983811	8553170	2	273,81,	0,15275,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	25992661	26001775	chr6:25992661-26001775	3	+	25992661	25992661	8553170	2	257,3873,	0,5241,
#Deleted in new
chr6	26013240	26013757	chr6:26013240-26013757	3	+	26013240	26013240	8553170	1	517,	0,
#Deleted in new
chr6	26016378	26016601	chr6:26016378-26016601	7	+	26016378	26016378	16724991	1	223,	0,
#Deleted in new
chr6	26017084	26017732	chr6:26017084-26017732	3	-	26017084	26017732	789624	1	648,	0,
#Deleted in new
chr6	26020489	26020900	chr6:26020489-26020900	3	+	26020489	26020900	0	1	411,	0,
#Deleted in new
chr6	26021678	26021990	chr6:26021678-26021990	3	+	26021678	26021990	0	1	312,	0,
#Deleted in new
chr6	26026814	26027252	chr6:26026814-26027252	3	-	26026940	26027252	0	1	438,	0,
#Deleted in new
chr6	26031649	26032060	chr6:26031649-26032060	3	-	26031649	26032060	0	1	411,	0,
#Deleted in new
chr6	26033175	26033568	chr6:26033175-26033568	3	-	26033175	26033568	0	1	393,	0,
#Deleted in new
chr6	26043276	26043657	chr6:26043276-26043657	3	-	26043276	26043657	0	1	381,	0,
#Deleted in new
chr6	26043988	26044357	chr6:26043988-26044357	7	+	26043988	26043988	16724991	1	369,	0,
#Deleted in new
chr6	26045410	26045821	chr6:26045410-26045821	3	+	26045410	26045821	0	1	411,	0,
#Deleted in new
chr6	26055786	26056428	chr6:26055786-26056428	3	-	26055786	26056428	789624	1	642,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	26087280	26095217	chr6:26087280-26095217	1	+	26087440	26094226	0	5	236,264,276,114,1032,	0,3560,5404,5838,6905,
#Partially deleted in new
chr6	26087280	26094987	chr6:26087280-26094987	1	+	26087440	26094226	0	5	236,276,276,114,802,	0,4033,5404,5838,6905,
#Partially deleted in new
chr6	26087280	26094488	chr6:26087280-26094488	1	+	26087440	26094226	0	3	236,114,303,	0,5838,6905,
#Partially deleted in new
chr6	26087280	26094368	chr6:26087280-26094368	1	+	26087440	26094226	0	4	236,276,114,183,	0,5404,5838,6905,
#Partially deleted in new
chr6	26087280	26094368	chr6:26087280-26094368	1	+	26087440	26094226	0	6	236,195,276,276,114,183,	0,3629,4033,5404,5838,6905,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	26087318	26098343	chr6:26087318-26098343	3	+	26087440	26094226	0	6	198,264,276,276,114,4158,	0,3522,3995,5366,5800,6867,
#Partially deleted in new
chr6	26087318	26092982	chr6:26087318-26092982	0	+	26087318	26087318	8553170	3	198,749,298,	0,3522,5366,
#Partially deleted in new
chr6	26087391	26094262	chr6:26087391-26094262	1	+	26087440	26094226	789624	7	125,264,276,33,234,114,77,	0,3449,3922,5217,5335,5727,6794,
#Partially deleted in new
chr6	26087396	26094257	chr6:26087396-26094257	1	+	26087440	26094226	0	5	120,264,234,114,72,	0,3444,5330,5722,6789,
#Partially deleted in new
chr6	26087397	26094257	chr6:26087397-26094257	0	+	26087397	26087397	8553170	5	119,264,418,114,72,	0,3443,5211,5721,6788,
#Partially deleted in new
chr6	26087404	26094230	chr6:26087404-26094230	1	+	26087440	26094226	0	6	112,264,276,234,114,45,	0,3436,3909,5322,5714,6781,
#Partially deleted in new
chr6	26087404	26094230	chr6:26087404-26094230	1	+	26087440	26094226	0	5	112,276,234,114,45,	0,3909,5322,5714,6781,
#Partially deleted in new
chr6	26087438	26094553	chr6:26087438-26094553	1	+	26087440	26094411	789624	6	78,264,276,276,114,150,	0,3402,3875,5246,5680,6965,
#Deleted in new
chr6	26092947	26095020	chr6:26092947-26095020	0	+	26092947	26094411	789624	4	13,114,33,617,	0,171,1238,1456,
#Deleted in new
chr6	26103875	26104310	chr6:26103875-26104310	3	+	26103947	26104259	0	1	435,	0,
#Deleted in new
chr6	26107418	26108136	chr6:26107418-26108136	3	-	26107469	26108093	789624	1	718,	0,
#Partially deleted in new
chr6	26114872	26123910	chr6:26114872-26123910	3	-	26123523	26123904	0	2	263,396,	0,8642,
#Deleted in new
chr6	26123355	26123926	chr6:26123355-26123926	1	-	26123523	26123904	0	1	571,	0,
#Partially deleted in new
chr6	26124144	26139116	chr6:26124144-26139116	0	+	26124232	26124625	0	2	605,1063,	0,13909,
#Partially deleted in new
chr6	26124144	26139102	chr6:26124144-26139102	3	+	26124232	26124625	0	2	605,1049,	0,13909,
#Partially deleted in new
chr6	26124202	26139084	chr6:26124202-26139084	1	+	26124232	26124625	0	2	431,1031,	0,13851,
#Deleted in new
chr6	26156353	26157107	chr6:26156353-26157107	3	+	26156390	26157050	0	1	754,	0,
#Partially deleted in new
chr6	26158145	26171349	chr6:26158145-26171349	3	+	26158169	26158550	789624	2	414,375,	0,12829,
#Deleted in new
chr6	26158145	26158641	chr6:26158145-26158641	1	+	26158169	26158550	789624	1	496,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	26160764	26172802	chr6:26160764-26172802	3	-	26160764	26160764	8553170	3	441,369,768,	0,2543,11270,
#Deleted in new
chr6	26164071	26164363	chr6:26164071-26164363	7	+	26164071	26164071	16724991	1	292,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	26172058	26184655	chr6:26172058-26184655	3	+	26183795	26184176	0	4	730,135,371,1349,	0,1704,9108,11248,
#Deleted in new
chr6	26183729	26184226	chr6:26183729-26184226	1	+	26183795	26184176	0	1	497,	0,
#Partially deleted in new
chr6	26188764	26189076	chr6:26188764-26189076	3	-	26188764	26189076	0	1	312,	0,
#Partially deleted in new
chr6	26195553	26196633	chr6:26195553-26196633	7	+	26195553	26195553	16724991	2	222,352,	0,728,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	26195594	26199293	chr6:26195594-26199293	0	-	26197141	26199243	789624	3	652,550,435,	0,1125,3264,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	26196039	26199293	chr6:26196039-26199293	3	-	26197141	26199243	8553170	2	1230,345,	0,2909,
#Partially deleted in new
chr6	26196753	26199293	chr6:26196753-26199293	1	-	26197141	26199243	789624	2	513,435,	0,2105,
#Deleted in new
chr6	26196839	26197250	chr6:26196839-26197250	3	-	26196839	26197250	0	1	411,	0,
#Deleted in new
chr6	26198850	26199243	chr6:26198850-26199243	3	-	26198850	26199243	0	1	393,	0,
#Deleted in new
chr6	26199519	26200715	chr6:26199519-26200715	3	+	26199558	26199939	0	1	1196,	0,
#Deleted in new
chr6	26202155	26202654	chr6:26202155-26202654	7	+	26202155	26202155	16724991	1	499,	0,
#Deleted in new
chr6	26204551	26206038	chr6:26204551-26206038	3	+	26204644	26204956	0	1	1487,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	26215158	26216692	chr6:26215158-26216692	3	-	26216262	26216643	0	1	1534,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	26216974	26217483	chr6:26216974-26217483	3	+	26216974	26217367	0	1	509,	0,
#Deleted in new
chr6	26219044	26219240	chr6:26219044-26219240	7	+	26219044	26219044	16724991	1	196,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	26224198	26227473	chr6:26224198-26227473	3	+	26225154	26225565	0	2	107,2572,	0,703,
#Deleted in new
chr6	26225154	26225616	chr6:26225154-26225616	1	+	26225154	26225565	0	1	462,	0,
#Deleted in new
chr6	26233121	26233255	chr6:26233121-26233255	7	+	26233121	26233121	16724991	1	134,	0,
#Deleted in new
chr6	26234267	26234933	chr6:26234267-26234933	3	-	26234267	26234933	789624	1	666,	0,
#Partially deleted in new
chr6	26240425	26240737	chr6:26240425-26240737	3	+	26240425	26240737	0	1	312,	0,
#Deleted in new
chr6	26246680	26246977	chr6:26246680-26246977	3	-	26246680	26246977	789624	1	297,	0,
#Deleted in new
chr6	26250194	26250605	chr6:26250194-26250605	3	-	26250194	26250605	0	1	411,	0,
#Deleted in new
chr6	26251650	26253710	chr6:26251650-26253710	3	+	26251650	26252031	789624	1	2060,	0,
#Deleted in new
chr6	26269404	26271815	chr6:26269404-26271815	3	-	26270973	26271384	0	1	2411,	0,
#Deleted in new
chr6	26272020	26272701	chr6:26272020-26272701	7	-	26272020	26272020	16724991	1	681,	0,
#Deleted in new
chr6	26272192	26272540	chr6:26272192-26272540	5	-	26272192	26272192	16724991	1	348,	0,
#Deleted in new
chr6	26272975	26273356	chr6:26272975-26273356	3	+	26272975	26273356	0	1	381,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	26277608	26285638	chr6:26277608-26285638	0	-	26285187	26285499	0	3	869,689,605,	0,3290,7425,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	26281054	26285534	chr6:26281054-26285534	0	-	26285187	26285499	0	2	533,501,	0,3979,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	26281054	26285534	chr6:26281054-26285534	3	-	26285187	26285499	0	2	533,501,	0,3979,
#Deleted in new
chr6	26285112	26285509	chr6:26285112-26285509	1	-	26285187	26285499	0	1	397,	0,
#Deleted in new
chr6	26321875	26322292	chr6:26321875-26322292	7	-	26321875	26321875	16724991	1	417,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	26365158	26378320	chr6:26365158-26378320	1	+	26365336	26374367	0	9	194,348,282,201,21,27,47,28,2524,	0,3406,5163,7738,8117,8228,9168,9612,10638,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	26365158	26378320	chr6:26365158-26378320	1	+	26368605	26374367	0	10	194,61,348,282,201,21,27,47,28,2524,	0,2831,3406,5163,7738,8117,8228,9168,9612,10638,
#Partially deleted in new
chr6	26365158	26370603	chr6:26365158-26370603	0	+	26368605	26370603	789624	4	194,61,348,282,	0,2831,3406,5163,
#Partially deleted in new
chr6	26365169	26372942	chr6:26365169-26372942	0	+	26368182	26372942	789624	5	48,61,90,348,46,	0,2820,3008,3395,7727,
#Partially deleted in new
chr6	26365169	26370360	chr6:26365169-26370360	0	+	26368605	26370360	789624	4	48,61,348,39,	0,2820,3395,5152,
#Partially deleted in new
chr6	26365203	26374373	chr6:26365203-26374373	0	+	26365203	26365203	8553170	7	14,61,192,282,21,27,47,	0,2786,3517,5118,8072,8183,9123,
#Deleted in new
chr6	26365207	26368729	chr6:26365207-26368729	0	+	26365207	26365207	8553170	2	145,740,	0,2782,
#Deleted in new
chr6	26365227	26368800	chr6:26365227-26368800	0	+	26368182	26368496	789624	5	125,61,90,159,80,	0,2762,2950,3222,3493,
#Partially deleted in new
chr6	26365227	26373296	chr6:26365227-26373296	0	+	26365227	26365227	8553170	5	125,61,192,201,21,	0,2762,3493,7669,8048,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	26365230	26378318	chr6:26365230-26378318	3	+	26368182	26374367	0	11	122,61,90,348,282,201,21,27,47,28,1790,	0,2759,2947,3334,5091,7666,8045,8156,9096,9540,11298,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	26365230	26375737	chr6:26365230-26375737	1	+	26368182	26374367	0	11	122,76,85,348,282,201,21,27,47,28,223,	0,2744,2952,3334,5091,7666,8045,8156,9096,9540,10284,
#Deleted in new
chr6	26365257	26368765	chr6:26365257-26368765	0	+	26365257	26365257	8553170	3	95,278,201,	0,2732,3307,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	26365263	26376236	chr6:26365263-26376236	1	+	26368182	26374367	0	11	89,61,90,348,282,201,21,27,47,28,440,	0,2726,2914,3301,5058,7633,8012,8123,9063,9507,10533,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	26365265	26375816	chr6:26365265-26375816	1	+	26368182	26374367	0	11	87,61,90,348,282,201,21,27,47,28,302,	0,2724,2912,3299,5056,7631,8010,8121,9061,9505,10249,
#Partially deleted in new
chr6	26365268	26373087	chr6:26365268-26373087	0	+	26365268	26365268	8553170	6	84,61,44,192,282,191,	0,2721,3296,3452,5053,7628,
#Partially deleted in new
chr6	26370424	26374808	chr6:26370424-26374808	0	+	26370424	26370424	8553170	4	179,138,47,38,	0,2851,3902,4346,
#Partially deleted in new
chr6	26370490	26373606	chr6:26370490-26373606	0	+	26370490	26370490	8553170	3	113,201,331,	0,2406,2785,
#Partially deleted in new
chr6	26370518	26373588	chr6:26370518-26373588	0	+	26370518	26373427	789624	4	85,201,21,202,	0,2378,2757,2868,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	26372692	26375701	chr6:26372692-26375701	0	+	26372692	26372692	8553170	1	3009,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	26383095	26394874	chr6:26383095-26394874	1	+	26383821	26394329	789624	8	204,124,348,282,207,21,27,577,	0,696,1919,4917,6909,7591,7707,11202,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	26383100	26394874	chr6:26383100-26394874	3	+	26383821	26392967	789624	8	81,124,348,282,207,21,27,2500,	0,691,1914,4912,6904,7586,7702,9274,
#Partially deleted in new
chr6	26383100	26392722	chr6:26383100-26392722	0	+	26388185	26392722	789624	6	81,282,207,21,27,348,	0,4912,6904,7586,7702,9274,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	26383101	26394874	chr6:26383101-26394874	1	+	26383821	26392967	789624	7	80,124,282,207,21,27,2500,	0,690,4911,6903,7585,7701,9273,
#Partially deleted in new
chr6	26383101	26390908	chr6:26383101-26390908	0	+	26383101	26383101	8553170	4	80,124,282,904,	0,690,4911,6903,
#Partially deleted in new
chr6	26383112	26388289	chr6:26383112-26388289	0	+	26383821	26388289	789624	4	132,124,348,277,	0,679,1902,4900,
#Partially deleted in new
chr6	26383125	26393008	chr6:26383125-26393008	1	+	26383821	26392295	789624	7	56,124,348,207,21,27,787,	0,666,1889,6879,7561,7677,9096,
#Partially deleted in new
chr6	26383125	26388249	chr6:26383125-26388249	0	+	26383821	26388249	789624	3	174,124,237,	0,666,4887,
#Partially deleted in new
chr6	26383125	26393007	chr6:26383125-26393007	1	+	26383821	26392967	789624	6	56,124,207,21,27,633,	0,666,6879,7561,7677,9249,
#Partially deleted in new
chr6	26383127	26390137	chr6:26383127-26390137	0	+	26388185	26390137	789624	3	172,282,133,	0,4885,6877,
#Partially deleted in new
chr6	26383142	26385559	chr6:26383142-26385559	0	+	26383142	26383142	8553170	3	39,124,545,	0,649,1872,
#Partially deleted in new
chr6	26383190	26388159	chr6:26383190-26388159	0	+	26383821	26385168	789624	4	109,124,220,147,	0,601,1952,4822,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	26383207	26393992	chr6:26383207-26393992	1	+	26383821	26392967	789624	8	106,124,348,282,207,21,27,1618,	0,584,1807,4805,6797,7479,7595,9167,
#Partially deleted in new
chr6	26383217	26385209	chr6:26383217-26385209	0	+	26383821	26385209	789624	3	82,263,195,	0,435,1797,
#Partially deleted in new
chr6	26383432	26390181	chr6:26383432-26390181	0	+	26383821	26390181	789624	3	483,282,177,	0,4580,6572,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	26390102	26393969	chr6:26390102-26393969	0	+	26390102	26390843	789624	3	109,21,3167,	0,584,700,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	26402236	26415216	chr6:26402236-26415216	3	+	26405563	26413692	0	10	176,277,348,282,201,21,27,27,27,2048,	0,3135,3672,5434,7296,7657,7769,8872,9318,10932,
#Partially deleted in new
chr6	26402236	26413246	chr6:26402236-26413246	1	+	26405563	26412745	0	10	176,107,348,282,201,21,27,27,27,542,	0,3305,3672,5434,7296,7657,7769,8872,9318,10468,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	26402249	26412920	chr6:26402249-26412920	1	+	26405563	26412530	0	10	163,277,348,282,201,21,27,27,27,509,	0,3122,3659,5421,7283,7644,7756,8859,9305,10162,
#Partially deleted in new
chr6	26402249	26406180	chr6:26402249-26406180	0	+	26405563	26406180	789624	3	163,145,272,	0,3254,3659,
#Partially deleted in new
chr6	26402249	26404555	chr6:26402249-26404555	0	+	26402249	26402249	8553170	2	163,421,	0,1885,
#Partially deleted in new
chr6	26402257	26405953	chr6:26402257-26405953	0	+	26405563	26405953	789624	4	155,93,277,45,	0,1877,3114,3651,
#Partially deleted in new
chr6	26402274	26406098	chr6:26402274-26406098	0	+	26405563	26406098	789624	3	138,291,190,	0,3083,3634,
#Partially deleted in new
chr6	26402294	26414073	chr6:26402294-26414073	1	+	26405563	26413692	0	10	118,277,348,126,201,21,27,27,27,905,	0,3077,3614,5532,7238,7599,7711,8814,9260,10874,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	26402307	26415204	chr6:26402307-26415204	0	+	26402307	26402307	8553170	9	105,277,348,282,201,139,27,27,2036,	0,3064,3601,5363,7225,7586,8801,9247,10861,
#Partially deleted in new
chr6	26409544	26413217	chr6:26409544-26413217	0	+	26409544	26409544	8553170	5	189,139,27,27,513,	0,349,1564,2010,3160,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	26409582	26413002	chr6:26409582-26413002	0	+	26409582	26409582	8553170	4	151,139,27,1448,	0,311,1526,1972,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	26421390	26430588	chr6:26421390-26430588	7	+	26421390	26421390	16724991	7	234,109,827,282,237,143,651,	0,698,1542,4851,6480,7252,8547,
#Partially deleted in new
chr6	26422118	26431615	chr6:26422118-26431615	5	+	26422118	26422118	16724991	6	79,345,282,237,27,866,	0,814,4123,5752,6640,8631,
#Partially deleted in new
chr6	26422118	26432383	chr6:26422118-26432383	5	+	26422118	26422118	16724991	7	79,345,361,282,237,143,1112,	0,814,1280,4123,5752,6524,9153,
#Partially deleted in new
chr6	26423551	26428671	chr6:26423551-26428671	4	+	26423551	26423551	16724991	3	208,342,29,	0,2630,5091,
#Partially deleted in new
chr6	26423729	26428031	chr6:26423729-26428031	4	+	26423729	26423729	16724991	3	30,342,161,	0,2452,4141,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	26440471	26453415	chr6:26440471-26453415	3	+	26443574	26452411	0	11	177,61,90,348,282,201,21,27,27,27,1741,	0,2910,3098,3485,5232,7776,8145,8256,9190,9635,11203,
#Partially deleted in new
chr6	26440471	26445707	chr6:26440471-26445707	0	+	26443574	26445707	789624	5	177,61,90,294,4,	0,2910,3098,3539,5232,
#Deleted in new
chr6	26440471	26444284	chr6:26440471-26444284	0	+	26443574	26444284	789624	4	177,76,90,328,	0,2895,3098,3485,
#Partially deleted in new
chr6	26440475	26445818	chr6:26440475-26445818	0	+	26443997	26445818	789624	4	173,61,348,115,	0,2906,3481,5228,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	26440487	26452815	chr6:26440487-26452815	1	+	26443997	26452411	0	10	161,61,19,348,282,201,27,27,27,1141,	0,2894,3153,3469,5216,7760,8240,9174,9619,11187,
#Deleted in new
chr6	26440492	26443939	chr6:26440492-26443939	0	+	26440492	26440492	8553170	3	156,61,370,	0,2889,3077,
#Deleted in new
chr6	26440496	26444298	chr6:26440496-26444298	0	+	26443997	26444298	789624	3	223,61,342,	0,2885,3460,
#Partially deleted in new
chr6	26440496	26445983	chr6:26440496-26445983	0	+	26443574	26445983	789624	5	223,61,90,348,280,	0,2885,3073,3460,5207,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	26440507	26453414	chr6:26440507-26453414	0	+	26440507	26440507	8553170	7	141,76,2029,507,27,27,1740,	0,2859,3449,7740,9154,9599,11167,
#Deleted in new
chr6	26440509	26443804	chr6:26440509-26443804	0	+	26440509	26440509	8553170	2	139,423,	0,2872,
#Partially deleted in new
chr6	26440555	26451917	chr6:26440555-26451917	0	+	26443997	26451917	789624	6	93,348,27,27,27,243,	0,3401,8172,9106,9551,11119,
#Partially deleted in new
chr6	26440557	26448409	chr6:26440557-26448409	0	+	26443997	26448409	789624	4	91,348,282,162,	0,3399,5146,7690,
#Partially deleted in new
chr6	26445537	26452161	chr6:26445537-26452161	0	+	26445537	26445537	8553170	7	448,201,21,27,27,27,487,	0,2710,3079,3190,4124,4569,6137,
#Deleted in new
chr6	26449236	26450214	chr6:26449236-26450214	0	+	26449236	26449236	8553170	2	452,108,	0,870,
#Deleted in new
chr6	26449414	26451915	chr6:26449414-26451915	0	+	26449414	26449414	8553170	3	274,27,241,	0,692,2260,
#Partially deleted in new
chr6	26457903	26469653	chr6:26457903-26469653	1	+	26459581	26468549	789624	7	239,348,282,222,21,27,1706,	0,1577,5340,7281,8049,8158,10044,
#Partially deleted in new
chr6	26457921	26469637	chr6:26457921-26469637	0	+	26458636	26462822	789624	9	221,112,348,101,282,222,21,27,1690,	0,685,1559,4875,5322,7263,8031,8140,10026,
#Partially deleted in new
chr6	26457924	26469637	chr6:26457924-26469637	3	+	26458636	26468549	789624	8	218,112,348,282,222,21,27,1690,	0,682,1556,5319,7260,8028,8137,10023,
#Partially deleted in new
chr6	26457949	26463253	chr6:26457949-26463253	0	+	26459581	26463253	789624	3	193,348,10,	0,1531,5294,
#Partially deleted in new
chr6	26457960	26469637	chr6:26457960-26469637	1	+	26458636	26467741	789624	8	182,112,348,282,222,21,27,1919,	0,646,1520,5283,7224,7992,8101,9758,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	26457967	26476621	chr6:26457967-26476621	1	+	26458636	26476132	789624	8	175,112,348,282,222,21,27,500,	0,639,1513,5276,7217,7985,8094,18154,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	26465226	26476619	chr6:26465226-26476619	0	+	26465226	26476168	789624	4	180,21,27,459,	0,726,835,10934,
#Deleted in new
chr6	26477871	26478533	chr6:26477871-26478533	7	+	26477871	26477871	16724991	1	662,	0,
#Partially deleted in new
chr6	26501220	26510422	chr6:26501220-26510422	3	+	26501286	26509174	789624	7	145,348,282,150,21,27,1922,	0,369,3704,5462,6729,6840,7280,
#Partially deleted in new
chr6	26501266	26509935	chr6:26501266-26509935	1	+	26501286	26509174	789624	8	99,348,282,150,21,27,440,899,	0,323,3658,5416,6683,6794,7234,7770,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	26519350	26519458	chr6:26519350-26519458	3	-	26519350	26519350	8553170	1	108,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	26521708	26527404	chr6:26521708-26527404	3	+	26521708	26521708	789624	1	5696,	0,
#Partially deleted in new
chr6	26538404	26546254	chr6:26538404-26546254	3	+	26545206	26545479	789624	2	97,1128,	0,6722,
#Partially deleted in new
chr6	26538437	26539949	chr6:26538437-26539949	0	+	26538437	26538437	8553170	2	64,49,	0,1463,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	26569323	26574698	chr6:26569323-26574698	3	+	26569323	26569323	789624	2	213,2671,	0,2704,
#Deleted in new
chr6	26596951	26600744	chr6:26596951-26600744	3	+	26596982	26598645	789624	3	272,197,2480,	0,962,1313,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	26602732	26606661	chr6:26602732-26606661	3	+	26602732	26602732	8553170	2	859,2006,	0,1923,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	26603463	26606661	chr6:26603463-26606661	0	+	26603463	26603463	8553170	1	3198,	0,
#Deleted in new
chr6	26611902	26613109	chr6:26611902-26613109	7	-	26611902	26611902	16724991	1	1207,	0,
#Partially deleted in new
chr6	26634382	26659752	chr6:26634382-26659752	3	-	26637344	26638553	789624	4	4346,70,89,312,	0,9276,24175,25058,
#Partially deleted in new
chr6	26634392	26659752	chr6:26634392-26659752	1	-	26637344	26638553	789624	3	4336,70,312,	0,9266,25048,
#Partially deleted in new
chr6	26634392	26659752	chr6:26634392-26659752	1	-	26637344	26638553	789624	3	4336,89,312,	0,24165,25048,
#Partially deleted in new
chr6	26634392	26659752	chr6:26634392-26659752	1	-	26637344	26638553	789624	5	4336,70,89,75,312,	0,9266,24165,24384,25048,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	26636290	26651496	chr6:26636290-26651496	1	-	26637344	26638553	789624	4	2438,70,39,128,	0,7368,14115,15078,
#Partially deleted in new
chr6	26638475	26659685	chr6:26638475-26659685	0	-	26638475	26638553	789624	3	253,89,245,	0,20082,20965,
#Partially deleted in new
chr6	26638626	26659735	chr6:26638626-26659735	0	-	26638626	26638626	8553170	3	102,70,295,	0,5032,20814,
#Partially deleted in new
chr6	26638639	26659689	chr6:26638639-26659689	0	-	26638639	26638639	8553170	5	89,70,89,75,249,	0,5019,19918,20137,20801,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	26677002	26683211	chr6:26677002-26683211	3	+	26677002	26677002	8553170	2	700,414,	0,5795,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	26686240	26687964	chr6:26686240-26687964	3	+	26686240	26686240	8553170	1	1724,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	26877920	26925213	chr6:26877920-26925213	4	-	26877920	26877920	16724991	5	915,175,85,188,94,	0,5422,7438,11089,47199,
#Partially deleted in new
chr6	26878571	26889198	chr6:26878571-26889198	5	-	26878571	26878571	16724991	5	264,175,85,88,189,	0,4771,6787,9392,10438,
#Deleted in new
chr6	26896951	26898777	chr6:26896951-26898777	7	+	26896951	26896951	16724991	1	1826,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	26956991	26974367	chr6:26956991-26974367	3	+	26956991	26956991	8553170	3	192,65,5350,	0,11466,12026,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	26956992	27023924	chr6:26956992-27023924	0	+	26956992	26956992	789624	3	191,65,671,	0,11465,66261,
#Deleted in new
chr6	27001207	27001648	chr6:27001207-27001648	3	-	27001207	27001207	8553170	1	441,	0,
#Partially deleted in new
chr6	27020452	27023924	chr6:27020452-27023924	0	+	27020452	27020452	8553170	3	203,144,160,	0,2801,3312,
#Partially deleted in new
chr6	27020635	27023924	chr6:27020635-27023924	0	+	27020635	27020635	8553170	3	20,144,175,	0,2618,3114,
#Deleted in new
chr6	27033434	27034310	chr6:27033434-27034310	7	-	27033434	27033434	16724991	1	876,	0,
#Deleted in new
chr6	27060364	27061249	chr6:27060364-27061249	7	-	27060364	27060364	16724991	1	885,	0,
#Deleted in new
chr6	27083279	27084147	chr6:27083279-27084147	7	+	27083279	27083279	16724991	1	868,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	27109789	27109980	chr6:27109789-27109980	3	-	27109789	27109789	8553170	1	191,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	27122656	27123221	chr6:27122656-27123221	3	-	27122656	27122656	8553170	1	565,	0,
#Partially deleted in new
chr6	27125896	27132750	chr6:27125896-27132750	3	-	27132369	27132750	0	2	566,384,	0,6470,
#Partially deleted in new
chr6	27126078	27132548	chr6:27126078-27132548	0	-	27126421	27132548	789624	2	384,24,	0,6446,
#Deleted in new
chr6	27132369	27132750	chr6:27132369-27132750	1	-	27132369	27132750	0	1	381,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	27133041	27135291	chr6:27133041-27135291	3	+	27133071	27133464	0	1	2250,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	27138587	27139881	chr6:27138587-27139881	3	+	27139308	27139620	0	1	1294,	0,
#Deleted in new
chr6	27146417	27146798	chr6:27146417-27146798	3	-	27146417	27146798	0	1	381,	0,
#Deleted in new
chr6	27147128	27147515	chr6:27147128-27147515	3	+	27147128	27147515	789624	1	387,	0,
#Deleted in new
chr6	27147625	27147688	chr6:27147625-27147688	3	+	27147625	27147625	5263520	1	63,	0,
#Deleted in new
chr6	27211243	27211913	chr6:27211243-27211913	7	+	27211243	27211243	16724991	1	670,	0,
#Partially deleted in new
chr6	27247700	27256453	chr6:27247700-27256453	1	+	27247737	27255315	789624	6	107,167,142,180,146,1207,	0,181,5107,6992,7285,7546,
#Partially deleted in new
chr6	27247700	27255868	chr6:27247700-27255868	0	+	27247737	27252908	789624	7	107,167,100,142,180,146,622,	0,181,1146,5107,6992,7285,7546,
#Partially deleted in new
chr6	27247722	27256471	chr6:27247722-27256471	3	+	27247737	27255315	789624	12	85,167,100,130,124,78,48,291,142,180,146,1225,	0,159,1124,1377,2960,3319,3494,4027,5085,6970,7263,7524,
#Partially deleted in new
chr6	27247730	27255119	chr6:27247730-27255119	0	+	27247737	27254755	789624	4	77,167,180,134,	0,151,6962,7255,
#Partially deleted in new
chr6	27247730	27254736	chr6:27247730-27254736	0	+	27247737	27249141	789624	5	77,167,130,142,44,	0,151,1369,5077,6962,
#Partially deleted in new
chr6	27247730	27254699	chr6:27247730-27254699	0	+	27247737	27252841	789624	6	77,167,100,130,142,7,	0,151,1116,1369,5077,6962,
#Partially deleted in new
chr6	27248935	27254699	chr6:27248935-27254699	0	+	27248935	27254699	789624	6	11,130,124,78,142,7,	0,164,1747,2106,3872,5757,
#Partially deleted in new
chr6	27248935	27254699	chr6:27248935-27254699	0	+	27248935	27254699	789624	5	11,130,124,142,7,	0,164,1747,3872,5757,
#Partially deleted in new
chr6	27251070	27255820	chr6:27251070-27255820	0	+	27251070	27251070	8553170	3	194,146,574,	0,3915,4176,
#Partially deleted in new
chr6	27251193	27255662	chr6:27251193-27255662	0	+	27251193	27251193	8553170	5	71,142,180,146,416,	0,1614,3499,3792,4053,
#Partially deleted in new
chr6	27251201	27255514	chr6:27251201-27255514	0	+	27251201	27251201	8553170	5	63,291,142,146,268,	0,548,1606,3784,4045,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	27251212	27252270	chr6:27251212-27252270	0	+	27251212	27251212	8553170	2	52,521,	0,537,
#Partially deleted in new
chr6	27251212	27255908	chr6:27251212-27255908	0	+	27251212	27251212	8553170	4	52,142,146,662,	0,1595,3773,4034,
#Partially deleted in new
chr6	27251298	27255571	chr6:27251298-27255571	0	+	27251298	27251298	8553170	5	203,142,180,146,325,	0,1509,3394,3687,3948,
#Partially deleted in new
chr6	27251321	27255346	chr6:27251321-27255346	0	+	27251321	27251321	8553170	4	180,142,146,100,	0,1486,3664,3925,
#Partially deleted in new
chr6	27251321	27255653	chr6:27251321-27255653	0	+	27251321	27251321	8553170	3	180,146,407,	0,3664,3925,
#Partially deleted in new
chr6	27251587	27256456	chr6:27251587-27256456	0	+	27251587	27251587	8553170	3	453,146,1210,	0,3398,3659,
#Partially deleted in new
chr6	27251619	27255319	chr6:27251619-27255319	0	+	27251619	27251619	8553170	5	421,142,180,146,73,	0,1188,3073,3366,3627,
#Partially deleted in new
chr6	27251661	27255381	chr6:27251661-27255381	0	+	27251661	27251661	8553170	4	379,180,146,135,	0,3031,3324,3585,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	27252985	27256624	chr6:27252985-27256624	0	+	27252985	27252985	8553170	3	1887,146,1378,	0,2000,2261,
#Deleted in new
chr6	27268112	27269229	chr6:27268112-27269229	7	+	27268112	27268112	16724991	1	1117,	0,
#Partially deleted in new
chr6	27285902	27311312	chr6:27285902-27311312	0	-	27286085	27311312	789624	2	246,216,	0,25194,
#Deleted in new
chr6	27309062	27312170	chr6:27309062-27312170	3	-	27309062	27312170	789624	1	3108,	0,
#Deleted in new
chr6	27324893	27325768	chr6:27324893-27325768	7	+	27324893	27324893	16724991	1	875,	0,
#Deleted in new
chr6	27357824	27360221	chr6:27357824-27360221	7	-	27357824	27357824	16724991	1	2397,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	27388717	27403904	chr6:27388717-27403904	3	+	27400370	27401447	789624	3	358,109,3612,	0,10724,11575,
#Partially deleted in new
chr6	27388903	27391132	chr6:27388903-27391132	0	+	27388903	27388903	8553170	2	172,153,	0,2076,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	27404009	27406964	chr6:27404009-27406964	3	-	27404009	27404009	8553170	1	2955,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	27407696	27407996	chr6:27407696-27407996	7	+	27407696	27407696	16724991	1	300,	0,
#Partially deleted in new
chr6	27450742	27473118	chr6:27450742-27473118	3	-	27451302	27472294	789624	6	2518,96,127,68,146,146,	0,6083,6540,17110,21545,22230,
#Partially deleted in new
chr6	27450819	27472681	chr6:27450819-27472681	1	-	27451302	27472294	789624	6	2441,96,127,68,146,21,	0,6006,6463,17033,21468,21841,
#Partially deleted in new
chr6	27454567	27457575	chr6:27454567-27457575	3	+	27454567	27454567	8553170	2	731,860,	0,2148,
#Partially deleted in new
chr6	27491421	27519435	chr6:27491421-27519435	3	-	27491421	27491421	8553170	4	195,111,112,106,	0,1784,4566,27908,
#Partially deleted in new
chr6	27510500	27510694	chr6:27510500-27510694	7	+	27510500	27510500	16724991	1	194,	0,
#Deleted in new
chr6	27515038	27515274	chr6:27515038-27515274	7	-	27515038	27515038	16724991	1	236,	0,
#Partially deleted in new
chr6	27523075	27524339	chr6:27523075-27524339	7	+	27523075	27523075	16724991	2	51,893,	0,371,
#Partially deleted in new
chr6	27560821	27561744	chr6:27560821-27561744	7	-	27560821	27560821	16724991	2	188,384,	0,539,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	27596411	27596517	chr6:27596411-27596517	3	+	27596411	27596411	8553170	1	106,	0,
#Partially deleted in new
chr6	27652601	27652825	chr6:27652601-27652825	7	-	27652601	27652601	16724991	1	224,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	27694072	27702713	chr6:27694072-27702713	0	+	27694072	27694072	8553170	2	434,400,	0,8241,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	27694078	27709157	chr6:27694078-27709157	1	+	27694078	27694078	789624	3	148,104,2519,	0,8235,12560,
#Deleted in new
chr6	27736999	27738494	chr6:27736999-27738494	7	-	27736999	27736999	16724991	1	1495,	0,
#Deleted in new
chr6	27780618	27781111	chr6:27780618-27781111	7	-	27780618	27780618	16724991	1	493,	0,
#Deleted in new
chr6	27807074	27807339	chr6:27807074-27807339	7	+	27807074	27807074	16724991	1	265,	0,
#Deleted in new
chr6	27807443	27807931	chr6:27807443-27807931	3	-	27807525	27807906	789624	1	488,	0,
#Deleted in new
chr6	27808198	27808701	chr6:27808198-27808701	3	+	27808209	27808602	0	1	503,	0,
#Deleted in new
chr6	27810063	27811300	chr6:27810063-27811300	3	+	27810073	27810484	0	1	1237,	0,
#Deleted in new
chr6	27814353	27814740	chr6:27814353-27814740	3	-	27814353	27814740	789624	1	387,	0,
#Deleted in new
chr6	27815043	27815424	chr6:27815043-27815424	3	+	27815043	27815424	789624	1	381,	0,
#Deleted in new
chr6	27824107	27824480	chr6:27824107-27824480	3	+	27824124	27824436	0	1	373,	0,
#Deleted in new
chr6	27831215	27831527	chr6:27831215-27831527	3	-	27831215	27831527	0	1	312,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	27837759	27839482	chr6:27837759-27839482	1	+	27838661	27839042	789624	1	1723,	0,
#Deleted in new
chr6	27837946	27838339	chr6:27837946-27838339	3	-	27837946	27838339	0	1	393,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	27838544	27852204	chr6:27838544-27852204	0	+	27838661	27839042	789624	3	521,98,96,	0,3019,13564,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	27838600	27855709	chr6:27838600-27855709	1	+	27838661	27852134	789624	3	438,98,3601,	0,2963,13508,
#Partially deleted in new
chr6	27838661	27865798	chr6:27838661-27865798	3	+	27838661	27865747	789624	2	377,55,	0,27082,
#Deleted in new
chr6	27864061	27864401	chr6:27864061-27864401	7	-	27864061	27864061	16724991	1	340,	0,
#Deleted in new
chr6	27865354	27865747	chr6:27865354-27865747	3	+	27865354	27865747	0	1	393,	0,
#Deleted in new
chr6	27866848	27867529	chr6:27866848-27867529	3	-	27866848	27867529	0	1	681,	0,
#Deleted in new
chr6	27871904	27872315	chr6:27871904-27872315	3	-	27871904	27872315	0	1	411,	0,
#Deleted in new
chr6	27873198	27873510	chr6:27873198-27873510	3	-	27873198	27873510	0	1	312,	0,
#Partially deleted in new
chr6	27890381	27890792	chr6:27890381-27890792	3	-	27890381	27890792	0	1	411,	0,
#Partially deleted in new
chr6	27890634	27893106	chr6:27890634-27893106	0	-	27890634	27890634	8553170	2	176,346,	0,2126,
#Deleted in new
chr6	27892756	27893149	chr6:27892756-27893149	3	-	27892756	27893149	0	1	393,	0,
#Deleted in new
chr6	27893462	27893843	chr6:27893462-27893843	3	+	27893462	27893843	789624	1	381,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	27897503	27897566	chr6:27897503-27897566	3	-	27897503	27897503	8553170	1	63,	0,
#Deleted in new
chr6	27911184	27912396	chr6:27911184-27912396	3	-	27911245	27912319	789624	1	1212,	0,
#Deleted in new
chr6	27937464	27938403	chr6:27937464-27938403	7	+	27937464	27937464	16724991	1	939,	0,
#Deleted in new
chr6	27957240	27958182	chr6:27957240-27958182	3	+	27957240	27958182	789624	1	942,	0,
#Deleted in new
chr6	27965174	27965514	chr6:27965174-27965514	7	+	27965174	27965174	16724991	1	340,	0,
#Deleted in new
chr6	27977149	27978075	chr6:27977149-27978075	7	+	27977149	27977149	16724991	1	926,	0,
#Deleted in new
chr6	28010722	28012355	chr6:28010722-28012355	7	+	28010722	28010722	16724991	1	1633,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	28015567	28015777	chr6:28015567-28015777	3	+	28015567	28015567	8553170	1	210,	0,
#Deleted in new
chr6	28033946	28034855	chr6:28033946-28034855	7	+	28033946	28033946	16724991	1	909,	0,
#Deleted in new
chr6	28046433	28047367	chr6:28046433-28047367	7	+	28046433	28046433	16724991	1	934,	0,
#Deleted in new
chr6	28053227	28054165	chr6:28053227-28054165	7	-	28053227	28053227	16724991	1	938,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	28073315	28074260	chr6:28073315-28074260	7	+	28073315	28073315	16724991	1	945,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	28078791	28081130	chr6:28078791-28081130	3	-	28078791	28078791	8553170	2	181,505,	0,1834,
#Partially deleted in new
chr6	28080974	28089563	chr6:28080974-28089563	3	+	28085480	28089470	789624	4	556,411,139,1001,	0,4506,5197,7588,
#Partially deleted in new
chr6	28091153	28093664	chr6:28091153-28093664	7	+	28091153	28091153	16724991	2	331,1326,	0,1185,
#Deleted in new
chr6	28092426	28092845	chr6:28092426-28092845	5	+	28092426	28092426	16724991	1	419,	0,
#Deleted in new
chr6	28115627	28116551	chr6:28115627-28116551	7	+	28115627	28115627	16724991	1	924,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	28121794	28137293	chr6:28121794-28137293	3	-	28121794	28121794	789624	3	1417,197,549,	0,3828,14950,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	28121797	28136866	chr6:28121797-28136866	0	-	28121797	28121797	8553170	2	1414,122,	0,14947,
#Partially deleted in new
chr6	28124559	28130082	chr6:28124559-28130082	3	+	28125443	28129950	0	4	118,418,139,653,	0,853,2223,4870,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	28136848	28139678	chr6:28136848-28139678	3	+	28136848	28136848	8553170	1	2830,	0,
#Partially deleted in new
chr6	28141909	28154111	chr6:28141909-28154111	0	+	28148407	28149528	789624	6	120,523,142,92,124,1056,	0,6406,7573,9935,10351,11146,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	28141937	28159472	chr6:28141937-28159472	3	+	28148407	28154017	789624	6	92,509,142,92,124,6417,	0,6378,7545,9907,10323,11118,
#Partially deleted in new
chr6	28141937	28154073	chr6:28141937-28154073	1	+	28148407	28154017	789624	7	92,94,509,142,92,124,1018,	0,2393,6378,7545,9907,10323,11118,
#Partially deleted in new
chr6	28142210	28153079	chr6:28142210-28153079	0	+	28148407	28149528	789624	7	53,94,523,142,92,124,24,	0,2120,6105,7272,9634,10050,10845,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	28161768	28169588	chr6:28161768-28169588	7	+	28161768	28161768	16724991	6	53,158,158,153,1054,187,	0,840,1174,2980,4732,7633,
#Partially deleted in new
chr6	28161780	28169594	chr6:28161780-28169594	5	+	28161780	28161780	16724991	5	41,187,153,1054,193,	0,799,2968,4720,7621,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	28161791	28163511	chr6:28161791-28163511	4	+	28161791	28161791	16724991	2	30,932,	0,788,
#Partially deleted in new
chr6	28162417	28166638	chr6:28162417-28166638	4	+	28162417	28162417	16724991	3	349,153,138,	0,2331,4083,
#Deleted in new
chr6	28166558	28167368	chr6:28166558-28167368	5	+	28166558	28166558	16724991	1	810,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	28170844	28172521	chr6:28170844-28172521	3	+	28170844	28170844	8553170	1	1677,	0,
#Partially deleted in new
chr6	28176187	28176674	chr6:28176187-28176674	7	+	28176187	28176187	16724991	1	487,	0,
#Deleted in new
chr6	28188049	28189432	chr6:28188049-28189432	7	+	28188049	28188049	16724991	1	1383,	0,
#Deleted in new
chr6	28217642	28218634	chr6:28217642-28218634	7	-	28217642	28217642	16724991	1	992,	0,
#Partially deleted in new
chr6	28224885	28227207	chr6:28224885-28227207	0	+	28227084	28227207	789624	2	383,196,	0,2126,
#Partially deleted in new
chr6	28225263	28227958	chr6:28225263-28227958	1	+	28227084	28227727	789624	3	67,493,294,	0,1748,2401,
#Partially deleted in new
chr6	28225274	28233466	chr6:28225274-28233466	1	+	28227084	28233178	789624	5	92,493,148,153,905,	0,1737,2415,5061,7287,
#Partially deleted in new
chr6	28225291	28233466	chr6:28225291-28233466	1	+	28227084	28233178	789624	4	75,493,148,905,	0,1720,2398,7270,
#Partially deleted in new
chr6	28225291	28233482	chr6:28225291-28233482	3	+	28227084	28233178	789624	4	39,493,148,921,	0,1720,2398,7270,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	28225298	28233470	chr6:28225298-28233470	0	+	28227084	28227727	8553170	4	68,493,701,909,	0,1713,2366,7263,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	28225338	28229230	chr6:28225338-28229230	1	+	28227084	28228055	789624	3	28,493,1541,	0,1673,2351,
#Partially deleted in new
chr6	28226920	28232586	chr6:28226920-28232586	0	+	28227084	28232586	789624	3	584,148,25,	0,769,5641,
#Partially deleted in new
chr6	28227011	28233015	chr6:28227011-28233015	0	+	28227084	28233015	789624	4	493,148,87,454,	0,678,3390,5550,
#Partially deleted in new
chr6	28244622	28252224	chr6:28244622-28252224	3	-	28245115	28251980	789624	5	1353,124,83,148,667,	0,2346,3444,5064,6935,
#Deleted in new
chr6	28259319	28260958	chr6:28259319-28260958	3	+	28259371	28260580	789624	1	1639,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	28267009	28278221	chr6:28267009-28278221	1	+	28271919	28277096	789624	4	204,486,118,2027,	0,4844,5660,9185,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	28267057	28278201	chr6:28267057-28278201	1	+	28271919	28277096	789624	4	156,81,118,2007,	0,4796,5612,9137,
#Partially deleted in new
chr6	28267120	28281580	chr6:28267120-28281580	3	+	28271919	28281437	789624	4	93,81,118,265,	0,4733,5549,14195,
#Partially deleted in new
chr6	28267142	28272703	chr6:28267142-28272703	0	+	28271919	28272703	789624	3	71,483,34,	0,4711,5527,
#Partially deleted in new
chr6	28267148	28277159	chr6:28267148-28277159	1	+	28276283	28277096	789624	2	65,965,	0,9046,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	28267152	28277530	chr6:28267152-28277530	3	+	28271919	28277096	789624	4	61,483,118,1336,	0,4701,5517,9042,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	28267358	28278221	chr6:28267358-28278221	1	+	28271919	28277096	789624	4	95,81,118,2027,	0,4495,5311,8836,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	28267358	28278224	chr6:28267358-28278224	1	+	28271919	28277096	789624	4	95,486,118,2030,	0,4495,5311,8836,
#Partially deleted in new
chr6	28281571	28302549	chr6:28281571-28302549	3	+	28283813	28302284	789624	7	347,454,157,89,130,97,1826,	0,2184,3979,5508,15244,16323,19152,
#Deleted in new
chr6	28315612	28315883	chr6:28315612-28315883	7	-	28315612	28315612	16724991	1	271,	0,
#Deleted in new
chr6	28319659	28319852	chr6:28319659-28319852	7	-	28319659	28319659	16724991	1	193,	0,
#Deleted in new
chr6	28324692	28326717	chr6:28324692-28326717	0	-	28324692	28324692	8553170	2	114,682,	0,1343,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	28324736	28354195	chr6:28324736-28354195	1	-	28326165	28329683	789624	8	2118,151,412,154,138,47,91,65,	0,2646,4566,12053,13019,17009,29125,29394,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	28324736	28336134	chr6:28324736-28336134	1	-	28326165	28329683	789624	4	2118,151,476,305,	0,2646,4566,11093,
#Partially deleted in new
chr6	28324739	28336375	chr6:28324739-28336375	1	-	28326165	28327437	789624	4	2115,151,109,294,	0,2643,7545,11342,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	28324748	28336134	chr6:28324748-28336134	1	-	28326165	28327437	789624	3	2106,151,305,	0,2634,11081,
#Partially deleted in new
chr6	28324946	28336165	chr6:28324946-28336165	1	-	28326165	28329683	789624	4	1908,151,476,84,	0,2436,4356,11135,
#Partially deleted in new
chr6	28326294	28336375	chr6:28326294-28336375	0	-	28326294	28327437	789624	3	560,151,294,	0,1088,9787,
#Partially deleted in new
chr6	28326596	28336134	chr6:28326596-28336134	0	-	28326596	28327437	789624	4	258,151,109,53,	0,786,5688,9485,
#Partially deleted in new
chr6	28326735	28336198	chr6:28326735-28336198	0	-	28326735	28329683	789624	4	119,151,412,117,	0,647,2567,9346,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	28326774	28354204	chr6:28326774-28354204	0	-	28326774	28353894	789624	3	80,151,343,	0,608,27087,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	28327471	28335936	chr6:28327471-28335936	0	-	28327471	28329683	789624	3	62,412,107,	0,1831,8358,
#Partially deleted in new
chr6	28329363	28341751	chr6:28329363-28341751	0	-	28329363	28329683	789624	3	415,154,6,	0,7426,12382,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	28329373	28354186	chr6:28329373-28354186	0	-	28329373	28329683	789624	4	405,154,91,56,	0,7416,24488,24757,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	28329449	28354204	chr6:28329449-28354204	0	-	28329449	28329683	789624	4	265,154,91,74,	0,7340,24412,24681,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	28329610	28354065	chr6:28329610-28354065	0	-	28329610	28329683	789624	4	104,154,95,204,	0,7179,8188,24251,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	28329631	28354204	chr6:28329631-28354204	0	-	28329631	28329683	789624	3	83,154,343,	0,7158,24230,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	28336899	28354204	chr6:28336899-28354204	0	-	28336899	28336899	8553170	3	44,165,343,	0,16418,16962,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	28349913	28369177	chr6:28349913-28369177	3	+	28359586	28366285	789624	6	154,464,148,83,124,3752,	0,9611,11410,13389,13778,15512,
#Partially deleted in new
chr6	28349949	28366746	chr6:28349949-28366746	1	+	28361365	28366285	789624	5	118,148,83,124,1321,	0,11374,13353,13742,15476,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	28349949	28369170	chr6:28349949-28369170	1	+	28359586	28366285	789624	7	118,117,464,148,83,124,3745,	0,322,9575,11374,13353,13742,15476,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	28378954	28399734	chr6:28378954-28399734	3	-	28382488	28398405	789624	5	3655,1147,145,470,78,	0,11641,13947,19049,20702,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	28379218	28399731	chr6:28379218-28399731	1	-	28382488	28398405	789624	6	1653,419,1147,145,470,75,	0,2972,11377,13683,18785,20438,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	28410269	28410456	chr6:28410269-28410456	3	+	28410269	28410269	8553170	1	187,	0,
#Partially deleted in new
chr6	28431929	28443480	chr6:28431929-28443480	0	-	28435045	28436266	789624	4	122,627,485,82,	0,2522,3929,11469,
#Partially deleted in new
chr6	28432654	28443467	chr6:28432654-28443467	3	-	28434464	28436266	789624	4	2424,148,485,69,	0,2805,3204,10744,
#Partially deleted in new
chr6	28434890	28443502	chr6:28434890-28443502	0	-	28434890	28434890	8553170	3	188,148,104,	0,569,8508,
#Deleted in new
chr6	28446972	28447807	chr6:28446972-28447807	7	+	28446972	28446972	16724991	1	835,	0,
#Deleted in new
chr6	28455647	28456141	chr6:28455647-28456141	7	-	28455647	28455647	16724991	1	494,	0,
#Partially deleted in new
chr6	28503295	28515793	chr6:28503295-28515793	3	-	28504291	28515743	789624	5	1203,100,118,154,137,	0,2407,3016,7455,12361,
#Partially deleted in new
chr6	28503295	28515793	chr6:28503295-28515793	1	-	28504291	28515743	789624	6	1203,100,118,22,129,137,	0,2407,3016,7455,7480,12361,
#Partially deleted in new
chr6	28504185	28515787	chr6:28504185-28515787	1	-	28504311	28515743	789624	4	313,118,154,131,	0,2126,6565,11471,
#Partially deleted in new
chr6	28506332	28528215	chr6:28506332-28528215	0	-	28506332	28506332	8553170	5	97,154,62,156,88,	0,4418,20694,21365,21795,
#Partially deleted in new
chr6	28525924	28534952	chr6:28525924-28534952	3	+	28526013	28534167	0	5	176,154,118,100,992,	0,3526,5853,6396,8036,
#Partially deleted in new
chr6	28526011	28534045	chr6:28526011-28534045	1	+	28526013	28532382	0	4	89,154,100,85,	0,3439,6309,7949,
#Partially deleted in new
chr6	28528325	28534952	chr6:28528325-28534952	0	+	28528325	28528325	8553170	6	283,213,120,118,100,992,	0,1066,1680,3452,3995,5635,
#Partially deleted in new
chr6	28528330	28533979	chr6:28528330-28533979	0	+	28528330	28528330	8553170	4	278,154,100,19,	0,1120,3990,5630,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	28570534	28598030	chr6:28570534-28598030	1	-	28571910	28579386	789624	5	3293,1493,148,98,307,	0,4109,8737,23015,27189,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	28571629	28587335	chr6:28571629-28587335	3	-	28571910	28586717	789624	4	2198,1493,148,1038,	0,3014,7642,14668,
#Partially deleted in new
chr6	28576016	28616212	chr6:28576016-28616212	0	-	28576016	28576016	8553170	5	120,148,135,164,188,	0,3255,11445,11939,40008,
#Deleted in new
chr6	28585205	28586524	chr6:28585205-28586524	0	-	28585205	28585205	8553170	2	116,227,	0,1092,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	28587377	28591747	chr6:28587377-28591747	3	+	28587377	28587377	8553170	2	355,2519,	0,1851,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	28588006	28616194	chr6:28588006-28616194	0	-	28588006	28588006	8553170	4	113,1182,36,170,	0,1353,6205,28018,
#Deleted in new
chr6	28633380	28633594	chr6:28633380-28633594	7	-	28633380	28633380	16724991	1	214,	0,
#Deleted in new
chr6	28648285	28649066	chr6:28648285-28649066	3	-	28648285	28648285	8553170	2	366,171,	0,610,
#Deleted in new
chr6	28732016	28732904	chr6:28732016-28732904	7	+	28732016	28732016	16724991	1	888,	0,
#Deleted in new
chr6	28783632	28784004	chr6:28783632-28784004	7	-	28783632	28783632	16724991	1	372,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	28837868	28839006	chr6:28837868-28839006	3	-	28837868	28837868	8553170	2	452,257,	0,881,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	28859624	28863350	chr6:28859624-28863350	3	-	28859624	28859624	8553170	2	2391,67,	0,3659,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	28861149	28863677	chr6:28861149-28863677	0	-	28861149	28861149	789624	2	866,394,	0,2134,
#Deleted in new
chr6	28861415	28862047	chr6:28861415-28862047	7	+	28861415	28861415	16724991	1	632,	0,
#Partially deleted in new
chr6	28863289	28864630	chr6:28863289-28864630	0	-	28863289	28863289	8553170	2	247,313,	0,1028,
#Deleted in new
chr6	28888831	28889906	chr6:28888831-28889906	7	-	28888831	28888831	16724991	1	1075,	0,
#Deleted in new
chr6	28896529	28897322	chr6:28896529-28897322	3	+	28896529	28896529	789624	2	201,212,	0,581,
#Partially deleted in new
chr6	28903001	28923988	chr6:28903001-28923988	1	-	28904254	28923632	789624	9	1272,112,27,33,116,23,231,96,776,	0,1552,4234,5806,5971,8694,17010,18890,20211,
#Partially deleted in new
chr6	28903001	28923989	chr6:28903001-28923989	3	-	28904069	28923632	789624	8	1664,27,33,116,23,231,96,777,	0,4234,5806,5971,8694,17010,18890,20211,
#Partially deleted in new
chr6	28903001	28908989	chr6:28903001-28908989	0	-	28904069	28908989	789624	5	1664,27,72,33,17,	0,4234,4490,5806,5971,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	28903001	28923913	chr6:28903001-28923913	0	-	28903001	28903001	8553170	6	5839,116,23,231,96,701,	0,5971,8694,17010,18890,20211,
#Partially deleted in new
chr6	28904473	28907584	chr6:28904473-28907584	0	-	28904473	28904473	8553170	2	192,349,	0,2762,
#Partially deleted in new
chr6	28911306	28921976	chr6:28911306-28921976	0	-	28911306	28911306	8553170	3	412,231,85,	0,8705,10585,
#Partially deleted in new
chr6	28914775	28920183	chr6:28914775-28920183	0	-	28914775	28914775	8553170	2	515,172,	0,5236,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	28915644	28915744	chr6:28915644-28915744	3	+	28915644	28915644	8553170	1	100,	0,
#Deleted in new
chr6	28943876	28944537	chr6:28943876-28944537	3	+	28943876	28943876	5263520	2	150,316,	0,345,
#Partially deleted in new
chr6	28969129	28970460	chr6:28969129-28970460	7	-	28969129	28969129	16724991	1	1331,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	28977474	28977773	chr6:28977474-28977773	3	+	28977474	28977474	8553170	1	299,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	28986202	28987484	chr6:28986202-28987484	3	+	28986202	28986202	8553170	3	30,194,808,	0,110,474,
#Partially deleted in new
chr6	28986799	28988536	chr6:28986799-28988536	3	+	28986799	28986799	8553170	2	80,237,	0,1500,
#Partially deleted in new
chr6	28994784	29005260	chr6:28994784-29005260	3	-	28995000	29003954	789624	7	1802,105,127,92,82,269,253,	0,3949,4702,5171,8728,9161,10223,
#Partially deleted in new
chr6	28994784	29005316	chr6:28994784-29005316	0	-	28994784	28994784	8553170	6	1802,105,561,82,168,309,	0,3949,4702,8728,9113,10223,
#Deleted in new
chr6	29026679	29027607	chr6:29026679-29027607	7	-	29026679	29026679	16724991	1	928,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	29036020	29076479	chr6:29036020-29076479	3	+	29036020	29036020	789624	4	30,200,52,184,	0,27909,29100,40275,
#Partially deleted in new
chr6	29036222	29064025	chr6:29036222-29064025	1	+	29036222	29036222	8553170	4	123,135,107,96,	0,3991,8022,27707,
#Deleted in new
chr6	29044212	29045240	chr6:29044212-29045240	3	-	29044212	29045175	789624	1	1028,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	29063996	29076524	chr6:29063996-29076524	0	+	29063996	29063996	8553170	3	133,52,229,	0,1124,12299,
#Deleted in new
chr6	29071823	29072599	chr6:29071823-29072599	7	-	29071823	29071823	16724991	1	776,	0,
#Deleted in new
chr6	29076572	29077168	chr6:29076572-29077168	7	-	29076572	29076572	16724991	1	596,	0,
#Partially deleted in new
chr6	29086207	29087313	chr6:29086207-29087313	3	-	29086306	29087248	789624	1	1106,	0,
#Deleted in new
chr6	29099656	29102701	chr6:29099656-29102701	3	+	29100942	29101881	789624	2	202,1942,	0,1103,
#Deleted in new
chr6	29100608	29101881	chr6:29100608-29101881	1	+	29100942	29101881	789624	1	1273,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	29108058	29114770	chr6:29108058-29114770	3	+	29111890	29112826	789624	4	237,118,52,2890,	0,478,765,3822,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	29108215	29114770	chr6:29108215-29114770	1	+	29111890	29112826	789624	5	80,118,52,202,2890,	0,321,608,1240,3665,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	29111559	29112884	chr6:29111559-29112884	1	+	29111890	29112826	789624	1	1325,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	29124209	29128908	chr6:29124209-29128908	3	+	29124209	29124209	8553170	2	137,252,	0,4447,
#Deleted in new
chr6	29137879	29138816	chr6:29137879-29138816	5	-	29137879	29137879	16724991	1	937,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	29162474	29166201	chr6:29162474-29166201	3	-	29162474	29162474	8553170	1	3727,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	29170906	29175811	chr6:29170906-29175811	3	+	29173635	29174574	789624	2	199,2193,	0,2712,
#Deleted in new
chr6	29173302	29174574	chr6:29173302-29174574	1	+	29173635	29174574	789624	1	1272,	0,
#Deleted in new
chr6	29181509	29182445	chr6:29181509-29182445	7	+	29181509	29181509	16724991	1	936,	0,
#Partially deleted in new
chr6	29212885	29216933	chr6:29212885-29216933	7	+	29212885	29212885	16724991	2	44,1839,	0,2209,
#Partially deleted in new
chr6	29215235	29216179	chr6:29215235-29216179	5	+	29215235	29215235	16724991	1	944,	0,
#Partially deleted in new
chr6	29223972	29267085	chr6:29223972-29267085	5	+	29223972	29223972	16724991	3	79,230,155,	0,39859,42958,
#Partially deleted in new
chr6	29223999	29290440	chr6:29223999-29290440	4	+	29223999	29223999	16724991	2	52,315,	0,66126,
#Partially deleted in new
chr6	29229226	29230157	chr6:29229226-29230157	7	-	29229226	29229226	16724991	1	931,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	29262702	29264079	chr6:29262702-29264079	7	-	29262702	29262702	16724991	2	291,588,	0,789,
#Partially deleted in new
chr6	29268461	29269421	chr6:29268461-29269421	7	-	29268461	29268461	16724991	1	960,	0,
#Partially deleted in new
chr6	29284692	29292963	chr6:29284692-29292963	5	+	29284692	29284692	16724991	2	179,2901,	0,5370,
#Partially deleted in new
chr6	29284692	29292963	chr6:29284692-29292963	7	+	29284692	29284692	16724991	2	179,2796,	0,5475,
#Partially deleted in new
chr6	29284692	29292963	chr6:29284692-29292963	5	+	29284692	29284692	16724991	2	179,2838,	0,5433,
#Partially deleted in new
chr6	29290710	29291653	chr6:29290710-29291653	5	+	29290710	29290710	16724991	1	943,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	29301700	29313017	chr6:29301700-29313017	3	+	29306689	29307655	789624	2	87,6356,	0,4961,
#Partially deleted in new
chr6	29306625	29307742	chr6:29306625-29307742	1	+	29306689	29307655	789624	1	1117,	0,
#Deleted in new
chr6	29329625	29331061	chr6:29329625-29331061	7	-	29329625	29329625	16724991	1	1436,	0,
#Partially deleted in new
chr6	29353748	29368865	chr6:29353748-29368865	1	-	29355229	29356195	789624	2	2529,234,	0,14883,
#Partially deleted in new
chr6	29355229	29431967	chr6:29355229-29431967	3	-	29355229	29356195	789624	4	1048,76,38,104,	0,67377,67795,76634,
#Deleted in new
chr6	29355229	29356277	chr6:29355229-29356277	1	-	29355229	29356195	789624	1	1048,	0,
#Deleted in new
chr6	29373422	29375291	chr6:29373422-29375291	3	-	29374336	29375287	789624	1	1869,	0,
#Partially deleted in new
chr6	29395630	29398008	chr6:29395630-29398008	3	+	29396699	29397623	789624	2	185,1311,	0,1067,
#Deleted in new
chr6	29396554	29397623	chr6:29396554-29397623	1	+	29396699	29397623	789624	1	1069,	0,
#Partially deleted in new
chr6	29414927	29418905	chr6:29414927-29418905	3	+	29417279	29418226	8553170	2	84,1628,	0,2350,
#Deleted in new
chr6	29425503	29427732	chr6:29425503-29427732	1	-	29426693	29427641	789624	1	2229,	0,
#Deleted in new
chr6	29425503	29428466	chr6:29425503-29428466	1	-	29426693	29427641	789624	2	2229,253,	0,2710,
#Partially deleted in new
chr6	29425503	29457071	chr6:29425503-29457071	3	-	29426693	29427641	789624	5	2229,48,125,124,85,	0,3409,4797,6360,31483,
#Partially deleted in new
chr6	29425503	29432074	chr6:29425503-29432074	1	-	29426693	29427641	789624	2	2229,211,	0,6360,
#Deleted in new
chr6	29439305	29440977	chr6:29439305-29440977	3	+	29440015	29440954	789624	1	1672,	0,
#Deleted in new
chr6	29439938	29440977	chr6:29439938-29440977	1	+	29440009	29440954	789624	1	1039,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	29450209	29450558	chr6:29450209-29450558	7	+	29450209	29450209	16724991	1	349,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	29457180	29464328	chr6:29457180-29464328	3	+	29461769	29462720	789624	4	27,116,51,2830,	0,1273,3223,4318,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	29457187	29464328	chr6:29457187-29464328	1	+	29461769	29462720	789624	4	20,116,51,2834,	0,1266,3216,4307,
#Partially deleted in new
chr6	29457202	29461086	chr6:29457202-29461086	0	+	29457202	29457202	8553170	4	5,116,164,211,	0,1251,2818,3673,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	29459770	29464328	chr6:29459770-29464328	1	+	29461769	29462720	789624	3	414,1259,580,	0,1704,3978,
#Deleted in new
chr6	29461439	29462733	chr6:29461439-29462733	1	+	29461769	29462720	789624	1	1294,	0,
#Deleted in new
chr6	29461494	29462720	chr6:29461494-29462720	0	+	29461494	29461494	8553170	2	256,730,	0,496,
#Deleted in new
chr6	29461494	29462720	chr6:29461494-29462720	0	+	29461494	29461494	8553170	2	256,717,	0,509,
#Partially deleted in new
chr6	29464595	29469806	chr6:29464595-29469806	7	-	29464595	29464595	16724991	2	360,22,	0,5189,
#Deleted in new
chr6	29475024	29476071	chr6:29475024-29476071	7	-	29475024	29475024	16724991	1	1047,	0,
#Deleted in new
chr6	29486696	29487956	chr6:29486696-29487956	3	-	29486765	29487902	789624	1	1260,	0,
#Deleted in new
chr6	29489270	29489676	chr6:29489270-29489676	7	-	29489270	29489270	16724991	1	406,	0,
#Deleted in new
chr6	29528749	29533556	chr6:29528749-29533556	0	+	29528749	29528749	8553170	5	31,63,95,117,1477,	0,772,1199,2302,3330,
#Deleted in new
chr6	29529419	29533665	chr6:29529419-29533665	3	+	29529419	29529419	789624	3	165,95,2614,	0,529,1632,
#Deleted in new
chr6	29529442	29533560	chr6:29529442-29533560	0	+	29529442	29529442	8553170	1	4118,	0,
#Deleted in new
chr6	29529475	29532157	chr6:29529475-29532157	1	+	29529475	29529475	8553170	4	109,95,117,78,	0,473,1576,2604,
#Deleted in new
chr6	29537703	29538787	chr6:29537703-29538787	7	-	29537703	29537703	16724991	1	1084,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	29550406	29557721	chr6:29550406-29557721	3	+	29550851	29554166	789624	2	451,4497,	0,2818,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	29550406	29557721	chr6:29550406-29557721	0	+	29550406	29550406	8553170	2	451,4914,	0,2401,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	29550406	29557721	chr6:29550406-29557721	0	+	29550406	29550406	8553170	2	194,4497,	0,2818,
#Partially deleted in new
chr6	29555514	29559925	chr6:29555514-29559925	3	-	29555879	29559701	0	2	836,251,	0,4160,
#Partially deleted in new
chr6	29555628	29628038	chr6:29555628-29628038	1	-	29603542	29627791	0	19	722,176,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,553,	0,47912,48865,49231,49940,50762,51268,51473,52972,53600,55295,56922,57614,65472,66123,66475,67676,68261,71857,
#Deleted in new
chr6	29573908	29574836	chr6:29573908-29574836	7	+	29573908	29573908	16724991	1	928,	0,
#Deleted in new
chr6	29577458	29577748	chr6:29577458-29577748	7	+	29577458	29577458	16724991	1	290,	0,
#Partially deleted in new
chr6	29582248	29582332	chr6:29582248-29582332	3	+	29582248	29582248	789624	1	84,	0,
#Partially deleted in new
chr6	29582507	29583025	chr6:29582507-29583025	7	+	29582507	29582507	16724991	1	518,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	29585120	29590500	chr6:29585120-29590500	3	+	29587944	29588883	789624	2	230,2831,	0,2549,
#Deleted in new
chr6	29587454	29588968	chr6:29587454-29588968	1	+	29587944	29588883	789624	1	1514,	0,
#Partially deleted in new
chr6	29602227	29633131	chr6:29602227-29633131	0	-	29629140	29632385	789624	21	1489,144,129,128,94,108,117,133,78,64,243,192,66,102,171,135,161,161,204,85,282,	0,2266,2632,3341,4163,4669,4874,6373,8696,10323,11015,18873,19524,19876,21077,21662,25258,26859,29168,30073,30622,
#Partially deleted in new
chr6	29602229	29633135	chr6:29602229-29633135	1	-	29603542	29632385	0	22	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,204,85,286,	0,2264,2630,3339,4161,4667,4872,6371,6999,8694,10321,11013,18871,19522,19874,21075,21660,25256,26857,29166,30071,30620,
#Partially deleted in new
chr6	29602234	29628052	chr6:29602234-29628052	1	-	29603542	29627791	0	18	1482,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,567,	0,2259,2625,3334,4156,4662,4867,6366,6994,8689,10316,11008,18866,19517,19869,21070,21655,25251,
#Partially deleted in new
chr6	29602237	29633185	chr6:29602237-29633185	3	-	29603542	29632385	0	23	1479,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,186,204,85,336,	0,2256,2622,3331,4153,4659,4864,6363,6991,8686,10313,11005,18863,19514,19866,21067,21652,25248,26849,28220,29158,30063,30612,
#Partially deleted in new
chr6	29602237	29632934	chr6:29602237-29632934	0	-	29629104	29632385	789624	23	1479,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,122,204,85,85,	0,2256,2622,3331,4153,4659,4864,6363,6991,8686,10313,11005,18863,19514,19866,21067,21652,25248,26849,28284,29158,30063,30612,
#Partially deleted in new
chr6	29603313	29605149	chr6:29603313-29605149	0	-	29603313	29603313	8553170	3	403,144,290,	0,1180,1546,
#Partially deleted in new
chr6	29604912	29632385	chr6:29604912-29632385	0	-	29608704	29632385	0	19	76,128,94,108,117,133,78,64,243,192,66,102,171,135,161,21,186,204,85,	0,656,1478,1984,2189,3688,6011,7638,8330,16188,16839,17191,18392,18977,22573,24174,25545,26483,27388,
#Deleted in new
chr6	29604950	29606109	chr6:29604950-29606109	0	-	29604950	29604950	8553170	2	38,541,	0,618,
#Deleted in new
chr6	29605409	29606589	chr6:29605409-29606589	0	-	29605409	29605409	8553170	2	287,199,	0,981,
#Deleted in new
chr6	29607154	29611157	chr6:29607154-29611157	0	-	29607154	29607154	8553170	4	64,133,151,234,	0,1446,2074,3769,
#Partially deleted in new
chr6	29608453	29612599	chr6:29608453-29612599	0	-	29608453	29608453	8553170	3	280,78,49,	0,2470,4097,
#Partially deleted in new
chr6	29608704	29632387	chr6:29608704-29632387	1	-	29608704	29632385	0	14	29,78,64,243,192,66,102,171,135,161,21,186,204,87,	0,2219,3846,4538,12396,13047,13399,14600,15185,18781,20382,21753,22691,23596,
#Partially deleted in new
chr6	29613460	29622569	chr6:29613460-29622569	0	-	29613460	29613460	8553170	4	25,192,66,466,	0,7640,8291,8643,
#Deleted in new
chr6	29621803	29624261	chr6:29621803-29624261	0	-	29621803	29621803	8553170	4	14,102,171,372,	0,300,1501,2086,
#Deleted in new
chr6	29621813	29632509	chr6:29621813-29632509	0	-	29624019	29632385	789624	6	4,102,171,135,204,209,	0,290,1491,2076,9582,10487,
#Deleted in new
chr6	29627485	29632459	chr6:29627485-29632459	0	-	29629140	29632385	789624	5	161,161,186,204,159,	0,1601,2972,3910,4815,
#Deleted in new
chr6	29629898	29633067	chr6:29629898-29633067	0	-	29629898	29629898	8553170	4	745,204,85,218,	0,1497,2402,2951,
#Deleted in new
chr6	29630462	29633976	chr6:29630462-29633976	0	-	29630462	29632385	789624	4	181,204,85,139,	0,933,1838,3375,
#Deleted in new
chr6	29630546	29632782	chr6:29630546-29632782	0	-	29630546	29632696	789624	4	97,204,85,101,	0,849,1754,2135,
#Deleted in new
chr6	29636059	29636343	chr6:29636059-29636343	7	-	29636059	29636059	16724991	1	284,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	29656980	29672372	chr6:29656980-29672372	1	+	29657209	29671185	0	8	317,348,114,21,21,117,21,1201,	0,2338,9171,10662,10923,13300,13720,14191,
#Partially deleted in new
chr6	29657001	29666260	chr6:29657001-29666260	0	+	29657209	29659373	789624	3	296,343,109,	0,2322,9150,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	29657002	29672111	chr6:29657002-29672111	1	+	29657209	29671185	0	7	295,114,21,21,117,21,940,	0,9149,10640,10901,13278,13698,14169,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	29657091	29672372	chr6:29657091-29672372	3	+	29657209	29670879	0	7	206,348,114,21,21,117,1672,	0,2227,9060,10551,10812,13189,13609,
#Partially deleted in new
chr6	29657129	29659924	chr6:29657129-29659924	0	+	29657129	29657129	8553170	2	168,606,	0,2189,
#Partially deleted in new
chr6	29657209	29671718	chr6:29657209-29671718	1	+	29657209	29671450	0	6	88,348,114,21,21,297,	0,2109,8942,10433,10694,14212,
#Partially deleted in new
chr6	29657209	29671718	chr6:29657209-29671718	1	+	29657209	29671450	0	8	88,348,114,21,21,117,21,297,	0,2109,8942,10433,10694,13071,13491,14212,
#Partially deleted in new
chr6	29657209	29671718	chr6:29657209-29671718	1	+	29657209	29671450	0	7	88,348,114,21,21,21,297,	0,2109,8942,10433,10694,13491,14212,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	29657209	29671185	chr6:29657209-29671185	1	+	29657209	29671185	0	8	88,348,114,21,21,48,21,14,	0,2109,8942,10433,10694,12964,13491,13962,
#Partially deleted in new
chr6	29657209	29671185	chr6:29657209-29671185	1	+	29657209	29671185	789624	7	88,348,21,21,117,21,14,	0,2109,10433,10694,13071,13491,13962,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	29657209	29672372	chr6:29657209-29672372	1	+	29657209	29671185	0	7	88,348,114,21,21,21,1201,	0,2109,8942,10433,10694,13491,13962,
#Partially deleted in new
chr6	29657209	29671185	chr6:29657209-29671185	1	+	29657209	29671185	789624	6	88,114,21,21,21,14,	0,8942,10433,10694,13491,13962,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	29657209	29671185	chr6:29657209-29671185	1	+	29657209	29671185	0	7	88,114,21,21,48,21,14,	0,8942,10433,10694,12964,13491,13962,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	29657209	29671718	chr6:29657209-29671718	1	+	29657209	29671450	0	8	88,348,114,21,21,48,21,297,	0,2109,8942,10433,10694,12964,13491,14212,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	29657215	29664735	chr6:29657215-29664735	0	+	29657215	29657215	8553170	3	82,348,86,	0,2103,7434,
#Partially deleted in new
chr6	29657215	29663995	chr6:29657215-29663995	0	+	29657215	29657215	8553170	3	82,348,26,	0,2103,6754,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	29659318	29672372	chr6:29659318-29672372	0	+	29659318	29664709	789624	8	348,138,114,21,21,117,21,1201,	0,5311,6833,8324,8585,10962,11382,11853,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	29659318	29671718	chr6:29659318-29671718	0	+	29659318	29664709	789624	8	348,138,114,21,21,117,21,297,	0,5311,6833,8324,8585,10962,11382,12103,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	29670116	29670941	chr6:29670116-29670941	0	+	29670116	29670116	8553170	2	281,241,	0,584,
#Partially deleted in new
chr6	29672391	29677154	chr6:29672391-29677154	3	-	29672499	29677003	789624	4	1367,102,127,274,	0,2994,3541,4489,
#Partially deleted in new
chr6	29672482	29681110	chr6:29672482-29681110	1	-	29672499	29677003	789624	6	1276,102,127,33,393,49,	0,2903,3450,4398,4491,8579,
#Partially deleted in new
chr6	29672499	29677302	chr6:29672499-29677302	1	-	29672499	29677302	789624	4	1126,67,145,21,	0,2921,3433,4782,
#Deleted in new
chr6	29708124	29708547	chr6:29708124-29708547	7	-	29708124	29708124	16724991	1	423,	0,
#Deleted in new
chr6	29722774	29726526	chr6:29722774-29726526	1	+	29723463	29726407	0	8	226,222,270,276,276,117,33,124,	0,531,883,1398,2256,2672,3236,3628,
#Deleted in new
chr6	29722980	29723971	chr6:29722980-29723971	7	-	29722980	29722980	16724991	1	991,	0,
#Deleted in new
chr6	29723278	29727296	chr6:29723278-29727296	3	+	29723463	29727175	0	7	249,270,276,276,117,33,414,	0,379,894,1752,2168,2732,3604,
#Deleted in new
chr6	29723339	29726525	chr6:29723339-29726525	1	+	29723463	29726407	0	7	188,270,276,276,117,33,123,	0,318,833,1691,2107,2671,3063,
#Deleted in new
chr6	29723391	29724415	chr6:29723391-29724415	0	+	29723391	29723391	8553170	2	536,243,	0,781,
#Deleted in new
chr6	29723426	29726526	chr6:29723426-29726526	0	+	29723426	29723426	8553170	5	28,187,117,33,124,	0,1693,2020,2584,2976,
#Deleted in new
chr6	29723433	29725087	chr6:29723433-29725087	0	+	29723433	29723433	8553170	4	94,158,276,57,	0,336,739,1597,
#Deleted in new
chr6	29723463	29726526	chr6:29723463-29726526	1	+	29723463	29726407	0	6	64,270,276,117,33,124,	0,194,709,1983,2547,2939,
#Deleted in new
chr6	29723503	29724352	chr6:29723503-29724352	0	+	29723503	29723503	8553170	2	424,163,	0,686,
#Deleted in new
chr6	29723939	29725299	chr6:29723939-29725299	0	+	29723939	29723939	8553170	2	509,269,	0,1091,
#Deleted in new
chr6	29724038	29726526	chr6:29724038-29726526	0	+	29724038	29724038	8553170	6	44,202,276,117,33,124,	0,208,992,1408,1972,2364,
#Deleted in new
chr6	29724156	29726526	chr6:29724156-29726526	0	+	29724156	29724156	8553170	4	292,276,117,516,	0,874,1290,1854,
#Deleted in new
chr6	29724416	29726528	chr6:29724416-29726528	0	+	29724416	29724416	8553170	5	32,276,112,33,126,	0,614,1035,1594,1986,
#Partially deleted in new
chr6	29725053	29738528	chr6:29725053-29738528	0	+	29725053	29738150	789624	5	253,117,33,67,153,	0,393,957,13068,13322,
#Deleted in new
chr6	29725453	29729351	chr6:29725453-29729351	0	+	29725453	29728063	789624	2	110,1395,	0,2503,
#Deleted in new
chr6	29725533	29727296	chr6:29725533-29727296	0	+	29725533	29727175	789624	3	30,51,414,	0,459,1349,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	29726600	29749049	chr6:29726600-29749049	0	-	29726600	29726600	789624	6	539,131,471,336,278,150,	0,1764,11365,11950,20547,22299,
#Deleted in new
chr6	29726668	29727139	chr6:29726668-29727139	7	-	29726668	29726668	16724991	1	471,	0,
#Partially deleted in new
chr6	29735027	29748993	chr6:29735027-29748993	3	-	29735027	29735027	8553170	6	1793,236,121,336,255,94,	0,2938,3307,3523,10445,13872,
#Deleted in new
chr6	29737758	29738444	chr6:29737758-29738444	0	-	29737758	29737758	8553170	2	443,110,	0,576,
#Partially deleted in new
chr6	29741730	29748969	chr6:29741730-29748969	7	-	29741730	29741730	16724991	6	125,144,278,285,255,70,	0,2278,2536,3219,3742,7169,
#Deleted in new
chr6	29748288	29748513	chr6:29748288-29748513	7	+	29748288	29748288	16724991	1	225,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	29750370	29750472	chr6:29750370-29750472	3	+	29750370	29750370	8553170	1	102,	0,
#Deleted in new
chr6	29750728	29751148	chr6:29750728-29751148	7	-	29750728	29750728	16724991	1	420,	0,
#Deleted in new
chr6	29751964	29752207	chr6:29751964-29752207	3	-	29751964	29751964	8553170	1	243,	0,
#Partially deleted in new
chr6	29752572	29763295	chr6:29752572-29763295	3	+	29752572	29752572	8553170	2	355,1522,	0,9201,
#Deleted in new
chr6	29763257	29763392	chr6:29763257-29763392	7	-	29763257	29763257	16724991	1	135,	0,
#Partially deleted in new
chr6	29790953	29793101	chr6:29790953-29793101	5	+	29790953	29790953	16724991	4	33,68,81,665,	0,753,1271,1483,
#Partially deleted in new
chr6	29791752	29792750	chr6:29791752-29792750	7	-	29791752	29791752	16724991	1	998,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	29791905	29797811	chr6:29791905-29797811	7	+	29791905	29791905	16724991	3	400,270,619,	0,531,5287,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	29792222	29797811	chr6:29792222-29797811	5	+	29792222	29792222	16724991	3	83,270,4461,	0,214,1128,
#Partially deleted in new
chr6	29792233	29793136	chr6:29792233-29793136	5	+	29792233	29792233	16724991	3	72,270,192,	0,203,711,
#Deleted in new
chr6	29800414	29802425	chr6:29800414-29802425	7	+	29800414	29800414	16724991	5	258,276,128,37,48,	0,847,1247,1776,1963,
#Deleted in new
chr6	29803194	29803991	chr6:29803194-29803991	7	-	29803194	29803194	16724991	1	797,	0,
#Deleted in new
chr6	29812564	29812696	chr6:29812564-29812696	7	-	29812564	29812564	16724991	1	132,	0,
#Deleted in new
chr6	29826966	29831125	chr6:29826966-29831125	1	+	29827038	29830382	789624	8	78,82,270,276,276,117,33,358,	0,869,1080,1576,2451,2849,3411,3801,
#Deleted in new
chr6	29826978	29831122	chr6:29826978-29831122	3	+	29827844	29830382	0	8	66,185,270,276,276,117,33,355,	0,754,1068,1564,2439,2837,3399,3789,
#Deleted in new
chr6	29827384	29828364	chr6:29827384-29828364	7	-	29827384	29827384	16724991	1	980,	0,
#Deleted in new
chr6	29827820	29831125	chr6:29827820-29831125	1	+	29827844	29830382	0	7	97,270,276,276,117,33,358,	0,226,722,1597,1995,2557,2947,
#Deleted in new
chr6	29827844	29831125	chr6:29827844-29831125	1	+	29827844	29830382	0	5	73,270,117,33,358,	0,202,1971,2533,2923,
#Deleted in new
chr6	29827844	29831125	chr6:29827844-29831125	1	+	29827844	29830382	789624	6	73,270,276,117,33,358,	0,202,1573,1971,2533,2923,
#Deleted in new
chr6	29827844	29831125	chr6:29827844-29831125	0	+	29827844	29827844	8553170	6	73,270,276,515,33,358,	0,202,698,1573,2533,2923,
#Deleted in new
chr6	29827844	29831125	chr6:29827844-29831125	0	+	29827844	29830382	789624	7	73,270,276,117,33,48,358,	0,202,1573,1971,2533,2708,2923,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	29849549	29885615	chr6:29849549-29885615	7	-	29849549	29849549	16724991	4	1080,165,93,2062,	0,2772,7796,34004,
#Deleted in new
chr6	29852362	29852491	chr6:29852362-29852491	5	-	29852362	29852362	16724991	1	129,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	29871894	29873783	chr6:29871894-29873783	3	-	29871894	29871894	789624	1	1889,	0,
#Deleted in new
chr6	29887293	29888268	chr6:29887293-29888268	7	-	29887293	29887293	16724991	1	975,	0,
#Deleted in new
chr6	29887751	29890482	chr6:29887751-29890482	7	+	29887751	29887751	16724991	7	79,270,276,277,117,33,44,	0,203,715,1576,1955,2512,2687,
#Deleted in new
chr6	29896653	29897786	chr6:29896653-29897786	7	+	29896653	29896653	16724991	4	272,102,37,39,	0,397,908,1094,
#Deleted in new
chr6	29906542	29906909	chr6:29906542-29906909	7	+	29906542	29906542	16724991	2	135,57,	0,310,
#Deleted in new
chr6	29907782	29908645	chr6:29907782-29908645	7	-	29907782	29907782	16724991	2	161,167,	0,696,
#Deleted in new
chr6	29925982	29926973	chr6:29925982-29926973	7	-	29925982	29925982	16724991	1	991,	0,
#Deleted in new
chr6	29926458	29929232	chr6:29926458-29929232	7	+	29926458	29926458	16724991	6	72,270,275,265,117,47,	0,201,719,1605,1998,2727,
#Deleted in new
chr6	29934100	29934286	chr6:29934100-29934286	7	+	29934100	29934100	16724991	1	186,	0,
#Partially deleted in new
chr6	29941259	29945884	chr6:29941259-29945884	3	+	29942553	29945455	0	10	60,131,223,270,276,276,117,33,48,434,	0,706,1144,1497,2008,2862,3240,3799,3974,4191,
#Partially deleted in new
chr6	29942074	29943067	chr6:29942074-29943067	7	-	29942074	29942074	16724991	1	993,	0,
#Partially deleted in new
chr6	29942244	29945884	chr6:29942244-29945884	1	+	29942553	29945455	789624	8	382,270,276,276,135,33,48,434,	0,512,1023,1877,2255,2814,2989,3206,
#Partially deleted in new
chr6	29942469	29945884	chr6:29942469-29945884	1	+	29942553	29945455	0	8	157,270,276,276,117,33,48,434,	0,287,798,1652,2030,2589,2764,2981,
#Partially deleted in new
chr6	29942547	29945884	chr6:29942547-29945884	0	+	29942547	29942547	8553170	7	79,98,259,276,592,48,434,	0,209,737,1574,1952,2686,2903,
#Partially deleted in new
chr6	29942548	29945884	chr6:29942548-29945884	1	+	29942553	29945455	789624	5	78,270,276,276,434,	0,208,719,1573,2902,
#Partially deleted in new
chr6	29942551	29945884	chr6:29942551-29945884	0	+	29942551	29942551	8553170	7	75,787,276,117,29,48,434,	0,205,1570,1948,2511,2682,2899,
#Partially deleted in new
chr6	29942553	29945281	chr6:29942553-29945281	0	+	29942553	29942553	8553170	6	73,787,276,135,33,48,	0,203,1568,1946,2505,2680,
#Partially deleted in new
chr6	29942553	29945281	chr6:29942553-29945281	0	+	29942553	29942553	8553170	6	73,787,276,117,33,48,	0,203,1568,1946,2505,2680,
#Partially deleted in new
chr6	29942553	29945280	chr6:29942553-29945280	1	+	29942553	29945280	789624	6	73,270,276,276,33,47,	0,203,714,1568,2505,2680,
#Deleted in new
chr6	29956595	29958570	chr6:29956595-29958570	7	+	29956595	29956595	16724991	5	261,274,153,37,46,	0,843,1244,1743,1929,
#Deleted in new
chr6	29970800	29972464	chr6:29970800-29972464	7	-	29970800	29970800	16724991	3	276,281,256,	0,887,1408,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	29975111	29978410	chr6:29975111-29978410	3	+	29975111	29975111	789624	3	406,64,193,	0,2542,3106,
#Deleted in new
chr6	29977466	29977717	chr6:29977466-29977717	0	+	29977466	29977466	8553170	2	37,64,	0,187,
#Deleted in new
chr6	29993208	29993605	chr6:29993208-29993605	7	+	29993208	29993208	16724991	2	123,135,	0,262,
#Deleted in new
chr6	29994436	29995314	chr6:29994436-29995314	7	-	29994436	29994436	16724991	2	165,170,	0,708,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	30001010	30061144	chr6:30001010-30061144	5	-	30001010	30001010	16724991	12	1722,202,174,119,43,279,106,95,203,68,76,183,	0,2156,6212,6513,7621,7882,8715,20656,33897,34905,57104,59951,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	30001010	30061184	chr6:30001010-30061184	7	-	30001010	30001010	16724991	6	1722,203,68,76,255,106,	0,33897,34905,57104,59730,60068,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	30001010	30060928	chr6:30001010-30060928	5	-	30001010	30001010	16724991	3	1722,76,188,	0,57104,59730,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	30001010	30061143	chr6:30001010-30061143	5	-	30001010	30001010	16724991	4	1722,95,76,403,	0,20656,57104,59730,
#Deleted in new
chr6	30005970	30009956	chr6:30005970-30009956	7	+	30005970	30005970	16724991	7	169,230,270,274,117,140,422,	0,469,829,2218,2614,3067,3564,
#Deleted in new
chr6	30006120	30007116	chr6:30006120-30007116	7	-	30006120	30006120	16724991	1	996,	0,
#Deleted in new
chr6	30006582	30009956	chr6:30006582-30009956	5	+	30006582	30006582	16724991	6	87,270,274,140,48,422,	0,217,1606,2455,2737,2952,
#Deleted in new
chr6	30006595	30009956	chr6:30006595-30009956	5	+	30006595	30006595	16724991	5	74,274,140,48,422,	0,1593,2442,2724,2939,
#Deleted in new
chr6	30006605	30009539	chr6:30006605-30009539	5	+	30006605	30006605	16724991	8	64,270,276,274,117,33,48,5,	0,194,712,1583,1979,2539,2714,2929,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	30012098	30035015	chr6:30012098-30035015	4	-	30012098	30012098	16724991	2	9663,108,	0,22809,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	30019769	30061640	chr6:30019769-30061640	5	-	30019769	30019769	16724991	6	155,95,203,68,76,900,	0,1897,15138,16146,38345,40971,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	30031712	30033003	chr6:30031712-30033003	7	+	30031712	30031712	16724991	2	436,548,	0,743,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	30034934	30058747	chr6:30034934-30058747	4	-	30034934	30034934	16724991	4	176,68,76,380,	0,981,23180,23433,
#Partially deleted in new
chr6	30035429	30061189	chr6:30035429-30061189	4	-	30035429	30035429	16724991	4	554,627,76,449,	0,21661,22685,25311,
#Deleted in new
chr6	30035915	30035983	chr6:30035915-30035983	3	+	30035915	30035915	8553170	1	68,	0,
#Deleted in new
chr6	30054600	30061179	chr6:30054600-30061179	4	-	30054600	30054600	16724991	3	3117,76,101,	0,3514,6478,
#Deleted in new
chr6	30056948	30058732	chr6:30056948-30058732	4	-	30056948	30056948	16724991	3	769,76,365,	0,1166,1419,
#Deleted in new
chr6	30056964	30058612	chr6:30056964-30058612	5	-	30056964	30056964	16724991	3	753,76,245,	0,1150,1403,
#Deleted in new
chr6	30058114	30058190	chr6:30058114-30058190	3	+	30058114	30058114	8553170	1	76,	0,
#Partially deleted in new
chr6	30058898	30064909	chr6:30058898-30064909	0	+	30058898	30058898	8553170	2	3435,237,	0,5774,
#Deleted in new
chr6	30061079	30061183	chr6:30061079-30061183	3	+	30061079	30061079	8553170	1	104,	0,
#Partially deleted in new
chr6	30061253	30064909	chr6:30061253-30064909	3	+	30061524	30064697	789624	4	416,101,110,237,	0,663,970,3419,
#Partially deleted in new
chr6	30061256	30064909	chr6:30061256-30064909	1	+	30061524	30064697	789624	5	133,155,101,110,237,	0,258,660,967,3416,
#Partially deleted in new
chr6	30061258	30064909	chr6:30061258-30064909	1	+	30061524	30064697	789624	5	140,155,101,110,237,	0,256,658,965,3414,
#Partially deleted in new
chr6	30061262	30064909	chr6:30061262-30064909	1	+	30061524	30064697	789624	5	151,155,101,110,237,	0,252,654,961,3410,
#Partially deleted in new
chr6	30061329	30064909	chr6:30061329-30064909	0	+	30061329	30061329	789624	4	69,155,110,237,	0,185,894,3343,
#Deleted in new
chr6	30066708	30070333	chr6:30066708-30070333	1	+	30068676	30069306	789624	3	301,109,1230,	0,1881,2395,
#Deleted in new
chr6	30067087	30070333	chr6:30067087-30070333	3	+	30067410	30069306	789624	3	392,109,1230,	0,1502,2016,
#Deleted in new
chr6	30067204	30070333	chr6:30067204-30070333	1	+	30068676	30069306	789624	4	275,75,109,1230,	0,1074,1385,1899,
#Deleted in new
chr6	30067542	30070333	chr6:30067542-30070333	1	+	30068676	30069306	789624	4	122,75,109,1230,	0,736,1047,1561,
#Deleted in new
chr6	30067575	30070333	chr6:30067575-30070333	1	+	30068676	30069306	789624	4	50,75,109,1230,	0,703,1014,1528,
#Deleted in new
chr6	30068205	30070333	chr6:30068205-30070333	1	+	30068676	30069306	789624	2	493,1230,	0,898,
#Partially deleted in new
chr6	30070265	30075887	chr6:30070265-30075887	3	-	30071110	30075789	789624	4	1426,92,23,665,	0,2891,3190,4957,
#Partially deleted in new
chr6	30070265	30075849	chr6:30070265-30075849	1	-	30071110	30075789	789624	5	935,293,92,23,627,	0,1133,2891,3190,4957,
#Partially deleted in new
chr6	30102896	30113106	chr6:30102896-30113106	3	-	30103535	30112805	0	9	893,66,75,116,23,231,96,500,43,	0,1205,2271,5156,6129,7551,8751,9492,10167,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	30102896	30105657	chr6:30102896-30105657	0	-	30102896	30102896	8553170	4	349,318,66,490,	0,575,1205,2271,
#Partially deleted in new
chr6	30103872	30108199	chr6:30103872-30108199	0	-	30103872	30103872	8553170	3	295,75,147,	0,1295,4180,
#Deleted in new
chr6	30103930	30105440	chr6:30103930-30105440	0	-	30103930	30103930	8553170	2	237,273,	0,1237,
#Partially deleted in new
chr6	30105195	30112186	chr6:30105195-30112186	0	-	30105195	30105195	8553170	6	47,116,23,231,96,107,	0,2857,3830,5252,6452,6884,
#Partially deleted in new
chr6	30105239	30114724	chr6:30105239-30114724	3	+	30105239	30105239	789624	4	148,125,122,154,	0,2423,6478,9331,
#Partially deleted in new
chr6	30108745	30111706	chr6:30108745-30111706	0	-	30108745	30108745	8553170	3	303,231,59,	0,1702,2902,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	30111217	30112475	chr6:30111217-30112475	0	-	30111217	30111217	8553170	2	526,87,	0,1171,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	30132804	30132966	chr6:30132804-30132966	3	-	30132804	30132804	8553170	1	162,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	30136107	30148735	chr6:30136107-30148735	1	+	30137036	30147812	789624	6	82,649,96,225,23,1011,	0,625,9886,10877,11412,11617,
#Deleted in new
chr6	30136123	30137198	chr6:30136123-30137198	0	+	30136123	30136123	8553170	2	475,466,	0,609,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	30136730	30148735	chr6:30136730-30148735	1	+	30137036	30147812	789624	5	651,96,225,23,1011,	0,9263,10254,10789,10994,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	30137009	30148735	chr6:30137009-30148735	3	+	30137036	30147812	789624	5	372,96,138,23,1011,	0,8984,10062,10510,10715,
#Partially deleted in new
chr6	30151944	30160934	chr6:30151944-30160934	1	-	30153687	30160858	789624	8	1827,176,33,116,23,231,96,505,	0,2366,3782,4994,5424,6454,7205,8485,
#Partially deleted in new
chr6	30151944	30160934	chr6:30151944-30160934	3	-	30153968	30160858	789624	7	2542,33,116,23,231,96,505,	0,3782,4994,5424,6454,7205,8485,
#Partially deleted in new
chr6	30163205	30172689	chr6:30163205-30172689	1	+	30163891	30172349	789624	8	860,96,231,9,14,116,33,858,	0,3970,5094,6035,6633,7295,7770,8626,
#Partially deleted in new
chr6	30163215	30172696	chr6:30163215-30172696	3	+	30163684	30172349	789624	7	850,96,231,23,116,33,865,	0,3960,5084,6025,7285,7760,8616,
#Partially deleted in new
chr6	30163684	30172685	chr6:30163684-30172685	1	+	30163684	30172607	789624	2	304,122,	0,8879,
#Partially deleted in new
chr6	30168312	30171955	chr6:30168312-30171955	0	+	30168312	30171955	789624	5	218,23,116,33,101,	0,928,2188,2663,3542,
#Deleted in new
chr6	30170312	30171097	chr6:30170312-30171097	0	+	30170312	30170312	8553170	2	304,122,	0,663,
#Partially deleted in new
chr6	30184454	30204765	chr6:30184454-30204765	1	-	30185875	30199103	789624	9	2104,33,116,23,231,96,488,49,110,	0,4712,4963,5558,12061,13974,14211,16580,20201,
#Partially deleted in new
chr6	30184454	30213427	chr6:30184454-30213427	3	-	30185875	30199103	789624	9	2104,33,116,23,231,96,488,104,123,	0,4712,4963,5558,12061,13974,14211,16580,28850,
#Partially deleted in new
chr6	30184454	30213366	chr6:30184454-30213366	1	-	30185875	30199103	789624	10	2104,33,116,23,231,96,599,104,110,62,	0,4712,4963,5558,12061,13974,14211,16580,20201,28850,
#Partially deleted in new
chr6	30184454	30190394	chr6:30184454-30190394	0	-	30184454	30184454	8553170	3	2104,33,977,	0,4712,4963,
#Partially deleted in new
chr6	30186797	30188614	chr6:30186797-30188614	7	-	30186797	30186797	16724991	2	840,363,	0,1454,
#Partially deleted in new
chr6	30196535	30213419	chr6:30196535-30213419	0	-	30196535	30199103	789624	6	211,96,488,104,110,115,	0,1893,2130,4499,8120,16769,
#Partially deleted in new
chr6	30198490	30213385	chr6:30198490-30213385	0	-	30198490	30199103	789624	3	34,488,81,	0,175,14814,
#Partially deleted in new
chr6	30198737	30213366	chr6:30198737-30213366	0	-	30198737	30199103	789624	3	410,110,62,	0,5918,14567,
#Partially deleted in new
chr6	30198763	30213365	chr6:30198763-30213365	0	-	30198763	30198763	8553170	4	227,104,110,61,	0,2271,5892,14541,
#Partially deleted in new
chr6	30234038	30326134	chr6:30234038-30326134	3	-	30234038	30234038	789624	5	230,93,165,118,126,	0,319,8108,20308,91970,
#Deleted in new
chr6	30234038	30234477	chr6:30234038-30234477	0	-	30234038	30234038	8553170	2	230,120,	0,319,
#Partially deleted in new
chr6	30238300	30242279	chr6:30238300-30242279	7	+	30238300	30238300	16724991	3	405,96,252,	0,3375,3727,
#Partially deleted in new
chr6	30259583	30293014	chr6:30259583-30293014	7	+	30259583	30259583	16724991	6	501,211,276,117,48,612,	0,813,1620,2003,2711,32819,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	30259596	30266951	chr6:30259596-30266951	4	+	30259596	30259596	16724991	7	101,158,211,276,117,48,3676,	0,330,800,1607,1990,2698,3679,
#Deleted in new
chr6	30259624	30261703	chr6:30259624-30261703	5	+	30259624	30259624	16724991	5	73,270,275,276,117,	0,190,708,1579,1962,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	30282348	30286054	chr6:30282348-30286054	3	-	30282348	30282348	8553170	1	3706,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	30287396	30289372	chr6:30287396-30289372	0	-	30287396	30287396	8553170	1	1976,	0,
#Partially deleted in new
chr6	30289295	30326404	chr6:30289295-30326404	1	-	30289295	30289295	8553170	3	199,106,254,	0,6836,36855,
#Partially deleted in new
chr6	30290793	30326387	chr6:30290793-30326387	1	-	30290793	30290793	8553170	4	1806,494,106,34,	0,3677,5338,35560,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	30291005	30327150	chr6:30291005-30327150	1	-	30291005	30291005	789624	3	3959,106,797,	0,5126,35348,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	30291005	30326334	chr6:30291005-30326334	1	-	30291005	30291005	8553170	4	3959,106,214,326,	0,5126,23263,35003,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	30291005	30326347	chr6:30291005-30326347	1	-	30291005	30291005	8553170	3	3959,106,197,	0,5126,35145,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	30291005	30326376	chr6:30291005-30326376	1	-	30291005	30291005	8553170	3	3959,106,368,	0,5126,35003,
#Partially deleted in new
chr6	30291005	30326386	chr6:30291005-30326386	1	-	30291005	30291005	8553170	4	1594,494,106,236,	0,3465,5126,35145,
#Partially deleted in new
chr6	30291374	30326866	chr6:30291374-30326866	1	-	30291374	30291374	789624	5	1225,494,106,214,513,	0,3096,4757,22894,34979,
#Partially deleted in new
chr6	30292244	30296237	chr6:30292244-30296237	1	-	30292244	30292244	8553170	3	355,112,106,	0,2608,3887,
#Partially deleted in new
chr6	30292333	30296237	chr6:30292333-30296237	0	-	30292333	30292333	8553170	2	266,106,	0,3798,
#Partially deleted in new
chr6	30294406	30326897	chr6:30294406-30326897	1	-	30294406	30294406	8553170	4	558,106,214,38,	0,1725,19862,32453,
#Partially deleted in new
chr6	30294676	30326363	chr6:30294676-30326363	1	-	30294676	30294676	8553170	4	288,106,214,213,	0,1455,19592,31474,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	30300773	30304115	chr6:30300773-30304115	3	-	30300773	30300773	8553170	1	3342,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	30304070	30306960	chr6:30304070-30306960	1	-	30304070	30304070	8553170	1	2890,	0,
#Partially deleted in new
chr6	30304074	30326137	chr6:30304074-30326137	1	-	30304074	30304074	8553170	2	198,129,	0,21934,
#Partially deleted in new
chr6	30326478	30329751	chr6:30326478-30329751	0	+	30329317	30329751	789624	3	409,153,441,	0,2410,2832,
#Partially deleted in new
chr6	30326834	30329539	chr6:30326834-30329539	0	+	30329317	30329539	789624	4	161,45,153,229,	0,817,2054,2476,
#Partially deleted in new
chr6	30326843	30343728	chr6:30326843-30343728	1	+	30329317	30342259	0	9	152,153,460,96,231,23,90,116,2017,	0,2045,2467,3937,8901,13064,13428,13661,14868,
#Partially deleted in new
chr6	30326843	30343729	chr6:30326843-30343729	3	+	30329317	30342259	0	8	152,153,460,96,231,23,116,2018,	0,2045,2467,3937,8901,13064,13661,14868,
#Partially deleted in new
chr6	30326904	30335977	chr6:30326904-30335977	0	+	30329317	30335977	789624	5	91,133,460,96,233,	0,2004,2406,3876,8840,
#Partially deleted in new
chr6	30326919	30343729	chr6:30326919-30343729	1	+	30329317	30342259	0	9	76,45,133,460,96,231,23,116,2018,	0,732,1989,2391,3861,8825,12988,13585,14792,
#Partially deleted in new
chr6	30326956	30329495	chr6:30326956-30329495	0	+	30329317	30329495	789624	4	39,50,153,185,	0,690,1932,2354,
#Partially deleted in new
chr6	30327258	30343729	chr6:30327258-30343729	1	+	30329317	30342259	0	8	438,153,460,96,231,23,116,2018,	0,1630,2052,3522,8486,12649,13246,14453,
#Partially deleted in new
chr6	30327522	30329462	chr6:30327522-30329462	0	+	30329317	30329462	789624	3	174,133,152,	0,1386,1788,
#Partially deleted in new
chr6	30328888	30343729	chr6:30328888-30343729	1	+	30329317	30342259	0	8	153,460,96,231,23,90,116,2018,	0,422,1892,6856,11019,11383,11616,12823,
#Partially deleted in new
chr6	30328906	30346854	chr6:30328906-30346854	3	+	30329317	30346810	789624	11	135,460,96,231,23,116,185,101,83,126,142,	0,404,1874,6838,11001,11598,12805,16391,16584,17525,17806,
#Partially deleted in new
chr6	30329528	30341470	chr6:30329528-30341470	0	+	30329528	30341445	789624	6	242,96,231,23,34,82,	0,1252,6216,10379,10976,11860,
#Deleted in new
chr6	30345130	30346857	chr6:30345130-30346857	1	+	30345171	30346810	789624	5	98,101,107,126,145,	0,167,336,1301,1582,
#Deleted in new
chr6	30345133	30346493	chr6:30345133-30346493	0	+	30345133	30345133	8553170	4	95,101,439,62,	0,164,357,1298,
#Deleted in new
chr6	30345141	30346857	chr6:30345141-30346857	0	+	30345141	30345141	8553170	3	87,1260,145,	0,156,1571,
#Deleted in new
chr6	30345150	30346857	chr6:30345150-30346857	0	+	30345150	30345150	8553170	4	78,101,126,145,	0,147,1281,1562,
#Deleted in new
chr6	30345152	30346884	chr6:30345152-30346884	0	+	30345152	30345152	8553170	4	76,83,126,172,	0,338,1279,1560,
#Deleted in new
chr6	30345154	30346857	chr6:30345154-30346857	0	+	30345154	30345154	8553170	4	74,276,126,145,	0,143,1277,1558,
#Deleted in new
chr6	30345158	30346857	chr6:30345158-30346857	1	+	30345171	30346810	789624	4	240,83,126,145,	0,332,1273,1554,
#Deleted in new
chr6	30345158	30346857	chr6:30345158-30346857	3	+	30345171	30346810	789624	5	70,101,83,126,145,	0,139,332,1273,1554,
#Deleted in new
chr6	30345168	30346857	chr6:30345168-30346857	1	+	30345171	30346773	789624	5	60,101,83,133,145,	0,129,322,1263,1544,
#Deleted in new
chr6	30351415	30351550	chr6:30351415-30351550	7	+	30351415	30351415	16724991	1	135,	0,
#Deleted in new
chr6	30359277	30359911	chr6:30359277-30359911	7	-	30359277	30359277	16724991	1	634,	0,
#Deleted in new
chr6	30363111	30364280	chr6:30363111-30364280	7	-	30363111	30363111	16724991	1	1169,	0,
#Deleted in new
chr6	30414714	30419319	chr6:30414714-30419319	7	+	30414714	30414714	16724991	5	251,286,271,131,116,	0,517,1404,1791,4489,
#Partially deleted in new
chr6	30466451	30467994	chr6:30466451-30467994	7	+	30466451	30466451	16724991	2	414,853,	0,690,
#Deleted in new
chr6	30468881	30470251	chr6:30468881-30470251	7	+	30468881	30468881	16724991	1	1370,	0,
#Deleted in new
chr6	30485939	30486590	chr6:30485939-30486590	7	+	30485939	30485939	16724991	1	651,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	30489466	30494205	chr6:30489466-30494205	3	+	30489531	30492581	789624	8	129,270,276,276,117,33,43,1457,	0,259,773,1670,2070,2937,3074,3282,
#Deleted in new
chr6	30489509	30490365	chr6:30489509-30490365	0	+	30489509	30489509	8553170	2	86,640,	0,216,
#Deleted in new
chr6	30489511	30491283	chr6:30489511-30491283	0	+	30489511	30489511	8553170	3	484,276,147,	0,728,1625,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	30516265	30519217	chr6:30516265-30519217	3	+	30516265	30516265	8553170	2	346,505,	0,2447,
#Partially deleted in new
chr6	30541376	30557174	chr6:30541376-30557174	3	-	30546071	30556203	789624	12	4937,141,163,179,195,96,208,72,152,137,166,1044,	0,5319,5735,5975,11090,11707,11973,13198,13387,13678,14178,14754,
#Partially deleted in new
chr6	30546484	30552546	chr6:30546484-30552546	0	-	30546484	30546484	8553170	4	352,163,179,80,	0,627,867,5982,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	30547195	30547817	chr6:30547195-30547817	0	-	30547195	30547195	8553170	2	79,466,	0,156,
#Deleted in new
chr6	30552176	30553120	chr6:30552176-30553120	0	-	30552176	30552176	8553170	2	485,37,	0,907,
#Deleted in new
chr6	30553359	30556088	chr6:30553359-30556088	0	-	30553359	30555787	789624	5	198,72,152,137,534,	0,1215,1404,1695,2195,
#Partially deleted in new
chr6	30556885	30563723	chr6:30556885-30563723	3	+	30557344	30562495	789624	4	565,63,291,1335,	0,1264,4948,5503,
#Partially deleted in new
chr6	30557279	30563723	chr6:30557279-30563723	1	+	30557344	30562495	789624	3	171,291,1335,	0,4554,5109,
#Partially deleted in new
chr6	30557313	30563723	chr6:30557313-30563723	0	+	30557313	30557313	8553170	4	137,181,291,1335,	0,4014,4520,5075,
#Partially deleted in new
chr6	30557315	30563723	chr6:30557315-30563723	0	+	30557315	30557315	8553170	5	135,63,181,291,1335,	0,834,4012,4518,5073,
#Deleted in new
chr6	30557346	30558436	chr6:30557346-30558436	0	+	30557346	30557346	8553170	2	104,287,	0,803,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	30560030	30563723	chr6:30560030-30563723	0	+	30560030	30560030	8553170	2	2094,1335,	0,2358,
#Partially deleted in new
chr6	30571375	30591532	chr6:30571375-30591532	3	+	30571487	30590701	789624	25	185,47,96,127,38,108,75,114,114,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,998,	0,6033,6442,6700,6972,7094,8555,9030,11018,11690,12232,12429,12816,13042,13884,14182,14503,14758,15098,15265,18312,18430,18773,18930,19159,
#Partially deleted in new
chr6	30571392	30591313	chr6:30571392-30591313	1	+	30571487	30590701	789624	24	168,47,96,127,38,108,75,114,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,779,	0,6016,6425,6683,6955,7077,8538,9013,11673,12215,12412,12799,13025,13867,14165,14486,14741,15081,15248,18295,18413,18756,18913,19142,
#Partially deleted in new
chr6	30571432	30583708	chr6:30571432-30583708	0	+	30571487	30583708	789624	11	128,47,96,130,38,108,75,114,114,123,101,	0,5976,6385,6640,6915,7037,8498,8973,10961,11633,12175,
#Partially deleted in new
chr6	30571441	30580448	chr6:30571441-30580448	0	+	30578150	30580448	789624	7	119,96,127,38,108,75,43,	0,6376,6634,6906,7028,8489,8964,
#Deleted in new
chr6	30578126	30578494	chr6:30578126-30578494	0	+	30578126	30578126	8553170	2	76,147,	0,221,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr6	30582464	30597179	chr6:30582464-30597179	0	+	30582464	30590701	789624	18	43,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,627,611,	0,601,1143,1340,1727,1953,2795,3093,3414,3669,4009,4176,7223,7341,7684,7841,8070,14104,
#Deleted in new
chr6	30584331	30584417	chr6:30584331-30584417	3	+	30584331	30584331	5263520	1	86,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	30589428	30590743	chr6:30589428-30590743	0	+	30589428	30589428	8553170	4	546,65,73,209,	0,720,877,1106,
#Partially deleted in new
chr6	30600399	30617244	chr6:30600399-30617244	3	-	30601548	30609944	789624	20	1259,756,114,76,195,64,247,159,148,101,113,106,174,78,52,136,87,118,521,21,	0,1536,2446,2810,3072,3380,3608,3953,4188,4594,5523,5738,6068,6379,7440,8379,8677,9438,16078,16824,
#Deleted in new
chr6	30603572	30604212	chr6:30603572-30604212	0	-	30603572	30603572	8553170	2	271,205,	0,435,
#Partially deleted in new
chr6	30604611	30605998	chr6:30604611-30605998	0	-	30604611	30604611	8553170	2	483,76,	0,1311,
#Partially deleted in new
chr6	30605017	30606737	chr6:30605017-30606737	0	-	30605017	30605017	8553170	4	77,113,106,270,	0,905,1120,1450,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	30605808	30606243	chr6:30605808-30606243	0	-	30605808	30605808	8553170	2	227,106,	0,329,
#Partially deleted in new
chr6	30609946	30617244	chr6:30609946-30617244	0	-	30609946	30609946	8553170	4	9,54,521,21,	0,4602,6531,7277,
#Partially deleted in new
chr6	30616583	30618612	chr6:30616583-30618612	0	-	30616583	30616583	8553170	2	415,55,	0,1974,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	30617708	30626395	chr6:30617708-30626395	3	+	30617865	30625797	0	7	235,109,98,69,67,60,894,	0,1784,2000,2212,5123,7174,7793,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	30617842	30620124	chr6:30617842-30620124	0	+	30617842	30617842	8553170	4	101,109,98,204,	0,1650,1866,2078,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	30617851	30626395	chr6:30617851-30626395	0	+	30617851	30617851	8553170	5	92,497,67,60,894,	0,1641,4980,7031,7650,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	30617859	30626395	chr6:30617859-30626395	0	+	30617859	30617859	8553170	7	84,109,126,69,67,60,894,	0,1633,1821,2061,4972,7023,7642,
#Partially deleted in new
chr6	30626841	30644679	chr6:30626841-30644679	1	+	30626885	30643015	0	9	151,61,92,61,114,102,46,72,1912,	0,618,794,1009,1190,1487,13535,15334,15926,
#Partially deleted in new
chr6	30626855	30646823	chr6:30626855-30646823	1	+	30626885	30646643	0	13	137,61,92,61,114,102,46,69,72,244,80,43,355,	0,604,780,995,1176,1473,13521,13679,15320,15912,19039,19211,19613,
#Partially deleted in new
chr6	30626874	30644679	chr6:30626874-30644679	3	+	30626885	30643562	0	10	118,61,92,61,114,102,46,72,244,1151,	0,585,761,976,1157,1454,13502,15301,15893,16654,
#Partially deleted in new
chr6	30626875	30644679	chr6:30626875-30644679	1	+	30626885	30643015	0	10	117,61,92,61,114,102,46,69,72,1912,	0,584,760,975,1156,1453,13501,13659,15300,15892,
#Partially deleted in new
chr6	30626885	30644679	chr6:30626885-30644679	1	+	30626885	30643562	0	11	107,61,92,61,114,102,46,69,72,244,1151,	0,574,750,965,1146,1443,13491,13649,15290,15882,16643,
#Partially deleted in new
chr6	30626885	30646823	chr6:30626885-30646823	1	+	30627203	30646643	0	13	389,61,92,61,114,102,46,69,72,244,80,43,355,	0,574,750,965,1146,1443,13491,13649,15290,15882,19009,19181,19583,
#Partially deleted in new
chr6	30626892	30646823	chr6:30626892-30646823	0	+	30626892	30626892	8553170	12	100,61,92,61,114,102,46,69,72,80,43,355,	0,567,743,958,1139,1436,13484,13642,15283,19002,19174,19576,
#Partially deleted in new
chr6	30626914	30640698	chr6:30626914-30640698	0	+	30626914	30626914	8553170	8	78,61,92,61,114,102,46,164,	0,545,721,936,1117,1414,13462,13620,
#Partially deleted in new
chr6	30626919	30646823	chr6:30626919-30646823	0	+	30626919	30626919	789624	11	73,61,92,61,114,102,46,69,72,80,757,	0,540,716,931,1112,1409,13457,13615,15256,18975,19147,
#Partially deleted in new
chr6	30628399	30646402	chr6:30628399-30646402	0	+	30628399	30628399	8553170	6	31,46,72,80,43,128,	0,11977,13776,17495,17667,17875,
#Deleted in new
chr6	30633631	30633956	chr6:30633631-30633956	7	+	30633631	30633631	16724991	1	325,	0,
#Partially deleted in new
chr6	30641821	30646823	chr6:30641821-30646823	0	+	30641821	30641821	8553170	4	49,72,215,355,	0,354,4073,4647,
#Partially deleted in new
chr6	30647038	30653209	chr6:30647038-30653209	1	+	30647231	30652915	789624	6	808,402,89,201,70,408,	0,2519,3955,4227,5609,5763,
#Partially deleted in new
chr6	30647038	30651315	chr6:30647038-30651315	0	+	30647231	30649951	789624	4	265,209,89,50,	0,2712,3955,4227,
#Partially deleted in new
chr6	30647054	30653109	chr6:30647054-30653109	0	+	30647231	30651086	789624	6	249,402,107,201,70,308,	0,2503,3939,4211,5593,5747,
#Partially deleted in new
chr6	30647072	30653210	chr6:30647072-30653210	3	+	30647231	30652915	789624	6	231,402,89,201,70,409,	0,2485,3921,4193,5575,5729,
#Partially deleted in new
chr6	30647125	30652713	chr6:30647125-30652713	0	+	30647231	30651370	789624	3	178,201,66,	0,4140,5522,
#Partially deleted in new
chr6	30647163	30652915	chr6:30647163-30652915	1	+	30647231	30652915	789624	5	140,89,201,70,114,	0,3830,4102,5484,5638,
#Partially deleted in new
chr6	30647185	30649913	chr6:30647185-30649913	0	+	30647185	30647185	8553170	3	118,241,356,	0,420,2372,
#Partially deleted in new
chr6	30647420	30653109	chr6:30647420-30653109	0	+	30647420	30652915	789624	6	426,402,89,201,70,308,	0,2137,3573,3845,5227,5381,
#Partially deleted in new
chr6	30649905	30652749	chr6:30649905-30652749	0	+	30649905	30651086	789624	4	54,107,201,102,	0,1088,1360,2742,
#Partially deleted in new
chr6	30651053	30653109	chr6:30651053-30653109	0	+	30651053	30652732	789624	3	29,201,462,	0,212,1594,
#Partially deleted in new
chr6	30651265	30653102	chr6:30651265-30653102	0	+	30651265	30652805	789624	3	201,81,301,	0,1382,1536,
#Partially deleted in new
chr6	30651383	30653210	chr6:30651383-30653210	0	+	30651383	30652805	789624	2	83,409,	0,1418,
#Partially deleted in new
chr6	30652610	30652947	chr6:30652610-30652947	0	+	30652610	30652610	8553170	2	107,146,	0,191,
#Partially deleted in new
chr6	30653118	30661983	chr6:30653118-30661983	1	-	30653241	30661856	789624	12	252,174,162,163,68,119,163,141,153,99,211,228,	0,1587,2056,2316,3079,3272,3478,3833,6353,6617,6913,8637,
#Partially deleted in new
chr6	30653118	30673037	chr6:30653118-30673037	3	-	30653241	30672841	789624	20	252,174,162,163,68,119,163,141,153,99,211,116,111,192,204,255,57,163,239,403,	0,1587,2056,2316,3079,3272,3478,3833,6353,6617,6913,9508,9792,11682,11952,12360,17291,17671,17917,19516,
#Deleted in new
chr6	30659472	30660577	chr6:30659472-30660577	0	-	30659472	30659472	8553170	3	152,99,546,	0,263,559,
#Partially deleted in new
chr6	30665129	30672988	chr6:30665129-30672988	0	-	30665129	30672982	789624	6	145,255,57,163,239,33,	0,349,5280,5660,5906,7826,
#Partially deleted in new
chr6	30676388	30687895	chr6:30676388-30687895	3	-	30677268	30686018	789624	3	900,211,3488,	0,2790,8019,
#Partially deleted in new
chr6	30676388	30687216	chr6:30676388-30687216	1	-	30677268	30686018	789624	4	900,211,1639,103,	0,2790,8019,10725,
#Partially deleted in new
chr6	30676388	30687158	chr6:30676388-30687158	0	-	30676388	30676388	8553170	3	900,211,45,	0,2790,10725,
#Partially deleted in new
chr6	30676388	30687193	chr6:30676388-30687193	0	-	30676388	30676388	8553170	4	900,211,137,80,	0,2790,8019,10725,
#Partially deleted in new
chr6	30676388	30684744	chr6:30676388-30684744	1	-	30677268	30684674	789624	3	900,211,337,	0,2790,8019,
#Partially deleted in new
chr6	30676390	30687895	chr6:30676390-30687895	1	-	30677268	30686018	789624	3	898,211,3488,	0,2788,8017,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	30688046	30691420	chr6:30688046-30691420	3	-	30688660	30690974	789624	5	896,177,197,440,45,	0,1229,2000,2795,3329,
#Deleted in new
chr6	30688046	30690976	chr6:30688046-30690976	1	-	30688660	30690974	789624	3	896,197,135,	0,2000,2795,
#Deleted in new
chr6	30688046	30690723	chr6:30688046-30690723	0	-	30688660	30690723	789624	4	896,177,197,131,	0,1229,2000,2546,
#Deleted in new
chr6	30688046	30690986	chr6:30688046-30690986	0	-	30688046	30688046	8553170	3	896,219,145,	0,1978,2795,
#Deleted in new
chr6	30688046	30691002	chr6:30688046-30691002	0	-	30688046	30688046	789624	4	896,177,219,161,	0,1229,1978,2795,
#Deleted in new
chr6	30688046	30690974	chr6:30688046-30690974	0	-	30688046	30688046	8553170	2	896,133,	0,2795,
#Deleted in new
chr6	30688046	30690967	chr6:30688046-30690967	0	-	30688046	30688046	789624	3	896,177,126,	0,1229,2795,
#Deleted in new
chr6	30688046	30690353	chr6:30688046-30690353	0	-	30688046	30688046	8553170	2	896,307,	0,2000,
#Deleted in new
chr6	30688049	30691308	chr6:30688049-30691308	1	-	30688660	30690974	789624	4	893,177,197,467,	0,1226,1997,2792,
#Partially deleted in new
chr6	30696805	30697535	chr6:30696805-30697535	7	-	30696805	30696805	16724991	1	730,	0,
#Partially deleted in new
chr6	30699806	30717889	chr6:30699806-30717889	3	-	30700464	30715175	0	15	826,111,126,183,120,2478,71,792,93,60,1481,70,381,139,645,	0,2746,2945,3297,3611,3814,7577,7759,11605,11860,12067,13841,13996,15233,17438,
#Partially deleted in new
chr6	30700314	30704081	chr6:30700314-30704081	0	-	30700314	30700314	8553170	5	318,111,126,183,664,	0,2238,2437,2789,3103,
#Partially deleted in new
chr6	30703066	30713184	chr6:30703066-30713184	3	+	30703066	30703066	789624	3	127,114,497,	0,9245,9621,
#Partially deleted in new
chr6	30705447	30711914	chr6:30705447-30711914	0	-	30705447	30711914	789624	5	651,71,93,60,41,	0,1936,5964,6219,6426,
#Partially deleted in new
chr6	30705581	30707685	chr6:30705581-30707685	0	-	30705581	30705581	8553170	2	517,302,	0,1802,
#Deleted in new
chr6	30711471	30711931	chr6:30711471-30711931	0	-	30711471	30711471	8553170	3	30,60,58,	0,195,402,
#Partially deleted in new
chr6	30713207	30717075	chr6:30713207-30717075	1	-	30713704	30715175	789624	7	147,70,20,107,153,139,194,	0,440,595,618,823,1832,3674,
#Partially deleted in new
chr6	30713832	30717175	chr6:30713832-30717175	0	-	30713832	30715175	789624	3	351,139,92,	0,1207,3251,
#Partially deleted in new
chr6	30713939	30717447	chr6:30713939-30717447	0	-	30713939	30715175	789624	3	244,139,199,	0,1100,3309,
#Partially deleted in new
chr6	30713979	30717121	chr6:30713979-30717121	0	-	30713979	30715175	789624	3	204,139,240,	0,1060,2902,
#Partially deleted in new
chr6	30720200	30725426	chr6:30720200-30725426	3	+	30720506	30724397	0	4	363,109,111,2087,	0,2336,2717,3139,
#Partially deleted in new
chr6	30721573	30725426	chr6:30721573-30725426	1	+	30722967	30724397	789624	4	325,109,111,2087,	0,963,1344,1766,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	30721666	30725426	chr6:30721666-30725426	1	+	30722259	30724397	789624	4	596,109,111,2087,	0,870,1251,1673,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	30721698	30725426	chr6:30721698-30725426	1	+	30722967	30724397	789624	4	516,109,111,2087,	0,838,1219,1641,
#Deleted in new
chr6	30723104	30723877	chr6:30723104-30723877	3	-	30723104	30723104	8553170	1	773,	0,
#Partially deleted in new
chr6	30727708	30742733	chr6:30727708-30742733	3	-	30728115	30742189	789624	13	437,165,138,46,182,153,96,120,144,91,76,57,207,	0,2313,2719,2973,3210,12449,12787,12970,13481,13905,14083,14438,14818,
#Partially deleted in new
chr6	30727708	30740853	chr6:30727708-30740853	0	-	30727708	30727708	8553170	7	437,165,138,419,153,96,175,	0,2313,2719,2973,12449,12787,12970,
#Partially deleted in new
chr6	30730918	30742307	chr6:30730918-30742307	0	-	30730918	30742167	789624	6	182,153,96,120,144,161,	0,9239,9577,9760,10271,11228,
#Partially deleted in new
chr6	30730990	30740794	chr6:30730990-30740794	0	-	30730990	30730990	8553170	3	110,153,299,	0,9167,9505,
#Partially deleted in new
chr6	30731066	30742500	chr6:30731066-30742500	0	-	30731066	30742189	789624	9	34,153,96,120,144,91,76,57,117,	0,9091,9429,9612,10123,10547,10725,11080,11317,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	30736303	30736414	chr6:30736303-30736414	3	-	30736303	30736303	8553170	1	111,	0,
#Partially deleted in new
chr6	30740157	30742732	chr6:30740157-30742732	0	-	30740157	30740157	8553170	7	153,96,120,144,76,57,206,	0,338,521,1032,1634,1989,2369,
#Partially deleted in new
chr6	30740160	30742357	chr6:30740160-30742357	0	-	30740160	30742335	789624	3	150,96,211,	0,335,1986,
#Partially deleted in new
chr6	30740175	30742276	chr6:30740175-30742276	0	-	30740175	30742189	789624	7	135,96,120,144,91,76,130,	0,320,503,1014,1438,1616,1971,
#Partially deleted in new
chr6	30740253	30742706	chr6:30740253-30742706	0	-	30740253	30740253	8553170	7	57,96,120,515,76,57,180,	0,242,425,936,1538,1893,2273,
#Partially deleted in new
chr6	30740254	30742203	chr6:30740254-30742203	0	-	30740254	30742189	789624	7	56,96,120,144,43,76,57,	0,241,424,935,1407,1537,1892,
#Partially deleted in new
chr6	30740508	30742524	chr6:30740508-30742524	0	-	30740508	30742189	789624	7	83,120,144,91,76,57,58,	0,170,681,1105,1283,1638,1958,
#Deleted in new
chr6	30741353	30742677	chr6:30741353-30742677	0	-	30741353	30741353	8553170	2	850,151,	0,1173,
#Deleted in new
chr6	30742928	30743592	chr6:30742928-30743592	3	+	30742928	30742928	8553170	2	168,359,	0,305,
#Deleted in new
chr6	30743198	30744554	chr6:30743198-30744554	3	-	30743935	30744518	789624	2	998,246,	0,1110,
#Deleted in new
chr6	30743198	30744548	chr6:30743198-30744548	1	-	30744101	30744518	789624	1	1350,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	30751037	30751289	chr6:30751037-30751289	3	+	30751037	30751037	8553170	1	252,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	30766824	30792250	chr6:30766824-30792250	3	+	30766824	30766824	789624	4	127,182,68,825,	0,21866,24064,24601,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	30781957	30792250	chr6:30781957-30792250	0	+	30781957	30781957	8553170	3	169,182,825,	0,6733,9468,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	30798653	30830659	chr6:30798653-30830659	0	-	30798653	30798653	8553170	2	119,145,	0,31861,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	30812865	30830659	chr6:30812865-30830659	3	-	30812865	30812865	789624	2	1907,145,	0,17649,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	30839525	30848159	chr6:30839525-30848159	3	-	30839525	30839525	789624	3	494,113,192,	0,7511,8442,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	30864249	30864552	chr6:30864249-30864552	3	+	30864249	30864249	8553170	1	303,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	30866981	30875918	chr6:30866981-30875918	3	-	30866981	30866981	8553170	2	2852,1142,	0,7795,
#Partially deleted in new
chr6	30876420	30888987	chr6:30876420-30888987	0	+	30888729	30888987	789624	4	139,228,127,80,	0,4477,12267,12487,
#Partially deleted in new
chr6	30876443	30889411	chr6:30876443-30889411	0	+	30888729	30889411	789624	4	116,127,103,210,	0,12244,12464,12758,
#Partially deleted in new
chr6	30880779	30892303	chr6:30880779-30892303	0	+	30888729	30892303	789624	8	346,127,103,229,148,100,187,8,	0,7908,8128,8422,10193,10600,11222,11516,
#Partially deleted in new
chr6	30880848	30900154	chr6:30880848-30900154	1	+	30888729	30899296	0	20	277,173,56,127,103,229,148,100,187,247,96,152,166,111,245,128,219,235,150,999,	0,3689,4776,7839,8059,8353,10124,10531,11153,11447,12219,12423,13657,14555,15772,16165,16530,17224,18039,18307,
#Partially deleted in new
chr6	30880969	30889315	chr6:30880969-30889315	0	+	30888729	30889315	789624	5	156,173,127,103,114,	0,3568,7718,7938,8232,
#Partially deleted in new
chr6	30880986	30890987	chr6:30880986-30890987	0	+	30888729	30888959	789624	5	139,127,74,229,15,	0,7701,7950,8215,9986,
#Partially deleted in new
chr6	30881034	30888976	chr6:30881034-30888976	0	+	30888729	30888976	789624	5	91,67,173,127,69,	0,892,3503,7653,7873,
#Partially deleted in new
chr6	30881065	30889393	chr6:30881065-30889393	0	+	30888729	30889393	789624	5	60,56,127,103,192,	0,4559,7622,7842,8136,
#Deleted in new
chr6	30881294	30884707	chr6:30881294-30884707	0	+	30881294	30881294	8553170	2	76,170,	0,3243,
#Partially deleted in new
chr6	30882612	30899840	chr6:30882612-30899840	3	+	30888729	30899296	0	17	371,127,103,229,148,100,187,247,96,152,166,245,128,219,235,150,685,	0,6075,6295,6589,8360,8767,9389,9683,10455,10659,11893,14008,14401,14766,15460,16275,16543,
#Partially deleted in new
chr6	30882927	30889357	chr6:30882927-30889357	0	+	30888729	30889357	789624	5	56,173,127,103,156,	0,1610,5760,5980,6274,
#Partially deleted in new
chr6	30882933	30888997	chr6:30882933-30888997	0	+	30888729	30888997	789624	5	50,173,56,127,90,	0,1604,2691,5754,5974,
#Partially deleted in new
chr6	30882933	30889247	chr6:30882933-30889247	0	+	30888729	30889247	789624	6	50,63,173,127,103,46,	0,330,1604,5754,5974,6268,
#Deleted in new
chr6	30882933	30884827	chr6:30882933-30884827	0	+	30882933	30882933	8553170	2	50,290,	0,1604,
#Partially deleted in new
chr6	30882954	30891015	chr6:30882954-30891015	0	+	30888729	30891015	789624	6	29,56,127,103,229,43,	0,2670,5733,5953,6247,8018,
#Partially deleted in new
chr6	30882954	30900156	chr6:30882954-30900156	1	+	30888729	30899296	0	21	29,63,88,173,56,127,103,229,148,100,187,247,96,152,166,245,128,219,235,150,1001,	0,309,1103,1583,2670,5733,5953,6247,8018,8425,9047,9341,10113,10317,11551,13666,14059,14424,15118,15933,16201,
#Partially deleted in new
chr6	30882954	30889223	chr6:30882954-30889223	0	+	30888729	30889223	789624	7	29,63,173,56,127,103,22,	0,309,1583,2670,5733,5953,6247,
#Partially deleted in new
chr6	30882975	30890998	chr6:30882975-30890998	0	+	30888729	30890998	789624	5	190,127,103,229,26,	0,5712,5932,6226,7997,
#Partially deleted in new
chr6	30883084	30889232	chr6:30883084-30889232	0	+	30888729	30889232	789624	6	81,173,56,127,103,31,	0,1453,2540,5603,5823,6117,
#Partially deleted in new
chr6	30883170	30891065	chr6:30883170-30891065	0	+	30888729	30891065	789624	5	71,127,103,229,93,	0,5517,5737,6031,7802,
#Partially deleted in new
chr6	30883180	30891051	chr6:30883180-30891051	0	+	30888729	30888959	789624	5	61,127,74,229,79,	0,5507,5756,6021,7792,
#Partially deleted in new
chr6	30883200	30889428	chr6:30883200-30889428	0	+	30888729	30889428	789624	4	123,127,103,227,	0,5487,5707,6001,
#Deleted in new
chr6	30883400	30884078	chr6:30883400-30884078	0	+	30883400	30883400	8553170	2	487,98,	0,580,
#Partially deleted in new
chr6	30883444	30889269	chr6:30883444-30889269	0	+	30888729	30889269	789624	5	485,173,127,103,68,	0,1093,5243,5463,5757,
#Partially deleted in new
chr6	30883708	30888976	chr6:30883708-30888976	0	+	30888729	30888976	789624	5	179,173,56,127,69,	0,829,1916,4979,5199,
#Partially deleted in new
chr6	30884068	30900156	chr6:30884068-30900156	1	+	30888729	30899296	0	18	77,173,127,103,229,148,100,187,247,96,152,166,245,128,219,235,150,1001,	0,469,4619,4839,5133,6904,7311,7933,8227,8999,9203,10437,12552,12945,13310,14004,14819,15087,
#Partially deleted in new
chr6	30884068	30890983	chr6:30884068-30890983	0	+	30888729	30890983	789624	5	77,127,103,229,11,	0,4619,4839,5133,6904,
#Partially deleted in new
chr6	30884083	30900152	chr6:30884083-30900152	1	+	30888729	30899296	0	19	62,173,56,127,103,229,148,100,187,247,96,152,166,245,128,219,235,150,997,	0,454,1541,4604,4824,5118,6889,7296,7918,8212,8984,9188,10422,12537,12930,13295,13989,14804,15072,
#Partially deleted in new
chr6	30884103	30891036	chr6:30884103-30891036	0	+	30888729	30891036	789624	5	42,104,103,229,64,	0,4607,4804,5098,6869,
#Partially deleted in new
chr6	30884352	30892137	chr6:30884352-30892137	0	+	30888729	30892137	789624	8	358,56,127,103,229,148,100,136,	0,1272,4335,4555,4849,6620,7027,7649,
#Partially deleted in new
chr6	30884457	30900153	chr6:30884457-30900153	1	+	30888729	30899296	0	18	253,127,103,229,148,100,187,247,96,152,166,111,245,128,219,235,150,998,	0,4230,4450,4744,6515,6922,7544,7838,8610,8814,10048,10946,12163,12556,12921,13615,14430,14698,
#Partially deleted in new
chr6	30884546	30889207	chr6:30884546-30889207	0	+	30884546	30884546	8553170	4	164,56,323,6,	0,1078,4141,4655,
#Partially deleted in new
chr6	30884549	30900152	chr6:30884549-30900152	1	+	30888729	30899296	0	19	161,56,127,103,229,148,100,187,247,96,152,166,111,245,128,219,235,150,997,	0,1075,4138,4358,4652,6423,6830,7452,7746,8518,8722,9956,10854,12071,12464,12829,13523,14338,14606,
#Partially deleted in new
chr6	30884550	30892018	chr6:30884550-30892018	0	+	30891029	30892018	789624	5	160,56,148,100,17,	0,1074,6422,6829,7451,
#Partially deleted in new
chr6	30884555	30899241	chr6:30884555-30899241	0	+	30888729	30892168	0	16	155,127,103,229,148,187,247,96,152,166,245,128,219,235,150,86,	0,4132,4352,4646,6417,7446,7740,8512,8716,9950,12065,12458,12823,13517,14332,14600,
#Partially deleted in new
chr6	30884650	30889415	chr6:30884650-30889415	0	+	30884650	30884650	8553170	3	60,127,508,	0,4037,4257,
#Partially deleted in new
chr6	30884967	30899432	chr6:30884967-30899432	1	+	30885219	30899296	0	17	264,127,103,229,148,100,187,247,96,152,166,245,128,219,235,150,277,	0,3720,3940,4234,6005,6412,7034,7328,8100,8304,9538,11653,12046,12411,13105,13920,14188,
#Partially deleted in new
chr6	30884979	30889349	chr6:30884979-30889349	0	+	30888729	30889349	789624	5	138,56,127,103,148,	0,645,3708,3928,4222,
#Partially deleted in new
chr6	30885224	30891442	chr6:30885224-30891442	0	+	30888729	30891442	789624	6	130,127,103,229,148,63,	0,3463,3683,3977,5748,6155,
#Partially deleted in new
chr6	30885307	30889429	chr6:30885307-30889429	0	+	30888729	30889429	789624	4	81,127,103,228,	0,3380,3600,3894,
#Partially deleted in new
chr6	30885712	30889380	chr6:30885712-30889380	0	+	30888729	30889380	789624	4	51,127,103,179,	0,2975,3195,3489,
#Partially deleted in new
chr6	30885728	30891066	chr6:30885728-30891066	0	+	30885775	30891066	789624	5	83,127,103,229,94,	0,2959,3179,3473,5244,
#Partially deleted in new
chr6	30885746	30891334	chr6:30885746-30891334	0	+	30885746	30885746	8553170	5	65,127,103,229,362,	0,2941,3161,3455,5226,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	30886658	30888947	chr6:30886658-30888947	0	+	30888729	30888947	789624	3	405,127,40,	0,2029,2249,
#Partially deleted in new
chr6	30888388	30900156	chr6:30888388-30900156	1	+	30888729	30899296	0	16	426,103,229,148,100,187,247,96,152,166,245,128,219,235,150,1001,	0,519,813,2584,2991,3613,3907,4679,4883,6117,8232,8625,8990,9684,10499,10767,
#Partially deleted in new
chr6	30888687	30900152	chr6:30888687-30900152	1	+	30888729	30899296	789624	15	127,103,229,148,100,187,247,96,152,84,128,219,235,150,997,	0,220,514,2285,2692,3314,3608,4380,4584,5900,8326,8691,9385,10200,10468,
#Partially deleted in new
chr6	30888729	30892168	chr6:30888729-30892168	1	+	30888729	30892168	0	5	85,103,229,148,167,	0,178,472,2243,3272,
#Partially deleted in new
chr6	30888729	30899418	chr6:30888729-30899418	1	+	30888729	30899296	0	17	85,103,229,148,100,187,247,96,152,166,111,245,128,237,235,150,263,	0,178,472,2243,2650,3272,3566,4338,4542,5776,6674,7891,8284,8631,9343,10158,10426,
#Partially deleted in new
chr6	30888749	30891451	chr6:30888749-30891451	0	+	30888749	30891451	789624	5	65,73,229,148,72,	0,158,452,2223,2630,
#Deleted in new
chr6	30890407	30892314	chr6:30890407-30892314	0	+	30890407	30890407	8553170	5	382,148,100,187,19,	0,565,972,1594,1888,
#Deleted in new
chr6	30890759	30892085	chr6:30890759-30892085	0	+	30890759	30890759	8553170	3	361,100,84,	0,620,1242,
#Deleted in new
chr6	30890882	30890972	chr6:30890882-30890972	3	+	30890882	30890882	5263520	1	90,	0,
#Deleted in new
chr6	30891141	30892178	chr6:30891141-30892178	0	+	30891141	30891141	8553170	2	338,177,	0,860,
#Partially deleted in new
chr6	30891426	30898139	chr6:30891426-30898139	0	+	30891426	30898139	789624	11	53,187,247,96,152,84,111,135,128,219,67,	0,575,869,1641,1845,3161,3977,5304,5587,5952,6646,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	30892619	30893293	chr6:30892619-30893293	0	+	30892619	30892619	8553170	2	544,22,	0,652,
#Partially deleted in new
chr6	30893354	30897046	chr6:30893354-30897046	0	+	30893354	30893354	8553170	3	69,166,33,	0,1151,3659,
#Partially deleted in new
chr6	30893354	30897046	chr6:30893354-30897046	0	+	30893354	30893354	8553170	3	69,84,33,	0,1233,3659,
#Deleted in new
chr6	30894573	30897403	chr6:30894573-30897403	0	+	30894573	30897403	789624	4	98,245,128,43,	0,2047,2440,2787,
#Deleted in new
chr6	30897074	30899404	chr6:30897074-30899404	0	+	30897074	30899199	789624	4	67,219,235,517,	0,304,998,1813,
#Partially deleted in new
chr6	30908183	30914106	chr6:30908183-30914106	3	+	30909036	30913983	0	14	220,140,105,132,97,89,112,69,84,133,131,48,79,296,	0,850,1251,1748,2481,2669,2974,3247,3500,3830,4144,4926,5125,5627,
#Partially deleted in new
chr6	30908220	30914106	chr6:30908220-30914106	1	+	30909036	30913983	0	14	158,140,105,132,97,89,112,69,84,133,131,48,79,296,	0,813,1214,1711,2444,2632,2937,3210,3463,3793,4107,4889,5088,5590,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	30908222	30910634	chr6:30908222-30910634	0	+	30908222	30908222	8553170	5	181,140,105,132,40,	0,811,1212,1709,2372,
#Partially deleted in new
chr6	30908241	30926459	chr6:30908241-30926459	0	+	30908241	30908241	8553170	41	162,140,105,132,97,89,112,69,84,445,48,79,1227,82,101,122,67,98,107,120,112,89,91,128,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,351,	0,792,1193,1690,2423,2611,2916,3189,3442,3772,4868,5067,5569,6914,7113,7504,7739,7910,8636,8863,9453,10585,11516,11847,12091,12426,12823,12988,13347,13683,13874,14208,14464,14656,14862,15111,16112,17032,17302,17638,17867,
#Partially deleted in new
chr6	30909441	30912393	chr6:30909441-30912393	0	+	30909441	30909441	8553170	8	98,132,97,89,112,69,463,66,	0,490,1223,1411,1716,1989,2242,2886,
#Partially deleted in new
chr6	30911950	30914106	chr6:30911950-30914106	0	+	30911950	30911950	8553170	3	508,278,296,	0,1159,1860,
#Partially deleted in new
chr6	30912222	30914106	chr6:30912222-30914106	0	+	30912222	30912222	8553170	4	236,48,79,296,	0,887,1086,1588,
#Partially deleted in new
chr6	30914204	30926459	chr6:30914204-30926459	3	+	30914836	30926210	789624	29	833,82,101,122,67,98,82,120,112,89,91,128,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,351,	0,951,1150,1541,1776,1947,2673,2900,3490,4622,5553,5884,6128,6463,6860,7025,7384,7720,7911,8245,8501,8693,8899,9148,10149,11069,11339,11675,11904,
#Partially deleted in new
chr6	30914219	30926456	chr6:30914219-30926456	1	+	30915781	30926210	789624	29	125,82,101,122,67,98,82,120,112,89,91,128,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,348,	0,936,1135,1526,1761,1932,2658,2885,3475,4607,5538,5869,6113,6448,6845,7010,7369,7705,7896,8230,8486,8678,8884,9133,10134,11054,11324,11660,11889,
#Partially deleted in new
chr6	30914251	30917799	chr6:30914251-30917799	0	+	30914836	30917799	789624	10	93,233,82,101,122,67,98,82,120,105,	0,553,904,1103,1494,1729,1900,2626,2853,3443,
#Partially deleted in new
chr6	30914265	30917806	chr6:30914265-30917806	0	+	30914265	30914265	8553170	9	79,82,101,122,67,98,82,120,112,	0,890,1089,1480,1715,1886,2612,2839,3429,
#Partially deleted in new
chr6	30914330	30926413	chr6:30914330-30926413	1	+	30914411	30926210	789624	30	139,233,82,101,122,67,98,82,120,112,89,91,128,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,305,	0,474,825,1024,1415,1650,1821,2547,2774,3364,4496,5427,5758,6002,6337,6734,6899,7258,7594,7785,8119,8375,8567,8773,9022,10023,10943,11213,11549,11778,
#Deleted in new
chr6	30914381	30915416	chr6:30914381-30915416	0	+	30914836	30915416	789624	4	88,228,82,62,	0,428,774,973,
#Partially deleted in new
chr6	30916427	30917761	chr6:30916427-30917761	0	+	30916427	30916427	8553170	3	532,120,67,	0,677,1267,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr6	30918763	30926459	chr6:30918763-30926459	0	+	30918763	30918763	8553170	19	1085,128,104,82,77,76,103,71,126,173,69,79,128,153,207,112,176,129,351,	0,1325,1569,1904,2301,2466,2825,3161,3352,3618,3942,4134,4340,4589,5590,6510,6780,7116,7345,
#Partially deleted in new
chr6	30919825	30926459	chr6:30919825-30926459	0	+	30919825	30919825	8553170	18	23,128,104,82,77,76,103,126,105,69,79,128,153,207,112,176,129,351,	0,263,507,842,1239,1404,1763,2290,2624,2880,3072,3278,3527,4528,5448,5718,6054,6283,
#Deleted in new
chr6	30922582	30923505	chr6:30922582-30923505	0	+	30922582	30922582	8553170	4	192,79,128,153,	0,315,521,770,
#Partially deleted in new
chr6	30923207	30926459	chr6:30923207-30926459	0	+	30923207	30923207	8553170	6	24,1208,112,176,129,351,	0,145,2066,2336,2672,2901,
#Deleted in new
chr6	30931352	30932175	chr6:30931352-30932175	3	-	30931487	30932096	789624	3	222,89,140,	0,354,683,
#Deleted in new
chr6	30931352	30932109	chr6:30931352-30932109	0	-	30931352	30931352	8553170	2	222,403,	0,354,
#Partially deleted in new
chr6	30931361	30955636	chr6:30931361-30955636	1	-	30931487	30931787	789624	6	213,89,170,147,139,57,	0,345,21000,21696,23415,24218,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	30932617	30932709	chr6:30932617-30932709	3	-	30932617	30932617	8553170	1	92,	0,
#Partially deleted in new
chr6	30934522	30954221	chr6:30934522-30954221	3	+	30934622	30953117	789624	6	152,101,115,15,3953,1251,	0,2678,3546,6544,14024,18448,
#Partially deleted in new
chr6	30940971	30954221	chr6:30940971-30954221	1	+	30940999	30953117	789624	3	110,3953,1251,	0,7575,11999,
#Partially deleted in new
chr6	30940999	30954221	chr6:30940999-30954221	1	+	30940999	30953117	789624	4	82,864,461,1251,	0,7547,11039,11971,
#Deleted in new
chr6	30945978	30954862	chr6:30945978-30954862	3	-	30945978	30945978	8553170	3	381,138,86,	0,7088,8798,
#Partially deleted in new
chr6	30961402	30962396	chr6:30961402-30962396	7	-	30961402	30961402	16724991	2	565,91,	0,903,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	30983717	30989903	chr6:30983717-30989903	3	+	30983958	30988194	789624	3	302,1445,1904,	0,2519,4282,
#Partially deleted in new
chr6	30983717	30988637	chr6:30983717-30988637	1	+	30987537	30988194	789624	3	444,1445,638,	0,2519,4282,
#Partially deleted in new
chr6	31010473	31035402	chr6:31010473-31035402	3	+	31010706	31034938	789624	4	303,4599,386,731,	0,15028,21722,24198,
#Partially deleted in new
chr6	31054071	31059876	chr6:31054071-31059876	0	+	31054071	31054071	8553170	4	445,293,396,469,	0,2146,2443,5336,
#Partially deleted in new
chr6	31054201	31056001	chr6:31054201-31056001	0	+	31054201	31054201	8553170	2	315,190,	0,1610,
#Partially deleted in new
chr6	31054206	31059876	chr6:31054206-31059876	2	+	31054206	31054206	8553170	3	310,1201,469,	0,1503,5201,
#Partially deleted in new
chr6	31054206	31059657	chr6:31054206-31059657	0	+	31054206	31054206	8553170	2	299,250,	0,5201,
#Partially deleted in new
chr6	31054329	31056790	chr6:31054329-31056790	5	+	31054329	31054329	16724991	2	187,573,	0,1888,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	31083009	31083109	chr6:31083009-31083109	3	+	31083009	31083009	8553170	1	100,	0,
#Partially deleted in new
chr6	31111222	31112559	chr6:31111222-31112559	3	-	31111380	31112555	789624	2	1069,71,	0,1266,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	31114749	31118820	chr6:31114749-31118820	0	+	31114749	31114749	8553170	2	142,3685,	0,386,
#Partially deleted in new
chr6	31114772	31133694	chr6:31114772-31133694	0	+	31114772	31114772	8553170	4	119,161,77,142,	0,10906,14796,18780,
#Partially deleted in new
chr6	31114824	31117299	chr6:31114824-31117299	0	+	31114824	31114824	8553170	2	67,210,	0,2265,
#Partially deleted in new
chr6	31114830	31140092	chr6:31114830-31140092	3	+	31129632	31139932	789624	6	61,164,77,30,124,452,	0,10845,14738,23599,23825,24810,
#Partially deleted in new
chr6	31114830	31140038	chr6:31114830-31140038	0	+	31114830	31114830	8553170	2	61,398,	0,24810,
#Partially deleted in new
chr6	31114833	31138731	chr6:31114833-31138731	0	+	31114833	31114833	8553170	3	58,101,373,	0,10905,23525,
#Partially deleted in new
chr6	31114838	31139442	chr6:31114838-31139442	0	+	31114838	31114838	8553170	2	53,1084,	0,23520,
#Partially deleted in new
chr6	31115089	31120446	chr6:31115089-31120446	3	-	31116024	31120419	789624	2	2440,112,	0,5245,
#Partially deleted in new
chr6	31137535	31139350	chr6:31137535-31139350	3	-	31137950	31139026	789624	2	771,379,	0,1436,
#Partially deleted in new
chr6	31137648	31140037	chr6:31137648-31140037	1	+	31138756	31139932	789624	4	33,101,124,397,	0,710,1007,1992,
#Partially deleted in new
chr6	31138356	31140038	chr6:31138356-31140038	1	+	31139662	31139932	789624	2	103,398,	0,1284,
#Partially deleted in new
chr6	31140726	31140913	chr6:31140726-31140913	7	+	31140726	31140726	16724991	1	187,	0,
#Partially deleted in new
chr6	31142438	31158238	chr6:31142438-31158238	3	-	31142591	31157038	789624	18	278,172,152,102,189,137,46,113,107,111,150,111,136,164,304,214,67,72,	0,524,823,2248,2446,2727,3009,3257,5966,6179,7627,8016,8286,8520,12057,14292,14584,15728,
#Partially deleted in new
chr6	31142438	31157789	chr6:31142438-31157789	1	-	31142591	31157600	789624	18	278,172,152,102,189,137,46,113,107,111,150,111,136,164,304,214,67,405,	0,524,823,2248,2446,2727,3009,3257,5966,6179,7627,8016,8286,8520,12057,14292,14584,14946,
#Partially deleted in new
chr6	31142443	31158201	chr6:31142443-31158201	1	-	31142591	31157038	789624	16	273,172,152,102,189,137,107,111,150,111,136,164,304,214,133,35,	0,519,818,2243,2441,2722,5961,6174,7622,8011,8281,8515,12052,14287,14579,15723,
#Partially deleted in new
chr6	31142519	31157607	chr6:31142519-31157607	1	-	31142591	31157600	789624	18	197,172,152,102,189,137,46,113,107,111,150,111,136,164,304,106,67,223,	0,443,742,2167,2365,2646,2928,3176,5885,6098,7546,7935,8205,8439,11976,14211,14503,14865,
#Partially deleted in new
chr6	31143059	31145459	chr6:31143059-31145459	0	-	31143059	31143059	8553170	4	75,387,115,12,	0,1627,2128,2388,
#Partially deleted in new
chr6	31143095	31145115	chr6:31143095-31145115	0	-	31143095	31143095	8553170	4	39,152,160,231,	0,166,1533,1789,
#Partially deleted in new
chr6	31144519	31158194	chr6:31144519-31158194	0	-	31144519	31144519	8553170	14	554,137,46,113,107,111,150,111,136,164,304,214,133,24,	0,646,928,1176,3885,4098,5546,5935,6205,6439,9976,12211,12503,13651,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	31149159	31158191	chr6:31149159-31158191	0	-	31149159	31149159	8553170	3	509,67,25,	0,7863,9007,
#Partially deleted in new
chr6	31150501	31158194	chr6:31150501-31158194	0	-	31151109	31157038	789624	6	64,136,164,106,67,28,	0,223,457,6229,6521,7665,
#Partially deleted in new
chr6	31150744	31158194	chr6:31150744-31158194	0	-	31151109	31157038	789624	5	116,164,214,67,28,	0,214,5986,6278,7422,
#Partially deleted in new
chr6	31150747	31158194	chr6:31150747-31158194	0	-	31151109	31157038	789624	5	113,164,214,67,24,	0,211,5983,6275,7423,
#Partially deleted in new
chr6	31150866	31154751	chr6:31150866-31154751	0	-	31150866	31150866	8553170	2	256,256,	0,3629,
#Partially deleted in new
chr6	31150884	31158194	chr6:31150884-31158194	0	-	31150884	31150884	8553170	4	238,214,67,28,	0,5846,6138,7282,
#Partially deleted in new
chr6	31150974	31158209	chr6:31150974-31158209	0	-	31150974	31157038	789624	5	148,304,106,67,39,	0,3521,5756,6048,7196,
#Partially deleted in new
chr6	31151069	31158203	chr6:31151069-31158203	0	-	31151069	31157038	789624	5	53,304,106,67,37,	0,3426,5661,5953,7097,
#Partially deleted in new
chr6	31151091	31158081	chr6:31151091-31158081	0	-	31151091	31157038	789624	5	31,304,214,67,83,	0,3404,5639,5931,6907,
#Partially deleted in new
chr6	31154530	31158194	chr6:31154530-31158194	0	-	31154530	31156882	789624	3	269,214,28,	0,2200,3636,
#Partially deleted in new
chr6	31154542	31158160	chr6:31154542-31158160	0	-	31154542	31157038	789624	4	257,106,67,150,	0,2188,2480,3468,
#Partially deleted in new
chr6	31154555	31158073	chr6:31154555-31158073	0	-	31154555	31157038	789624	4	244,214,67,63,	0,2175,2467,3455,
#Partially deleted in new
chr6	31154571	31158217	chr6:31154571-31158217	0	-	31154571	31157038	789624	5	228,214,67,116,51,	0,2159,2451,2813,3595,
#Partially deleted in new
chr6	31154610	31158194	chr6:31154610-31158194	0	-	31154610	31157038	789624	4	189,214,133,24,	0,2120,2412,3560,
#Partially deleted in new
chr6	31154673	31157788	chr6:31154673-31157788	0	-	31154673	31157600	789624	4	126,214,67,431,	0,2057,2349,2684,
#Partially deleted in new
chr6	31154673	31158139	chr6:31154673-31158139	0	-	31154673	31157038	789624	4	126,214,67,255,	0,2057,2349,3211,
#Partially deleted in new
chr6	31154682	31158214	chr6:31154682-31158214	0	-	31154682	31157038	789624	5	117,214,67,143,48,	0,2048,2340,2675,3484,
#Partially deleted in new
chr6	31154727	31158205	chr6:31154727-31158205	0	-	31154727	31157038	789624	3	72,359,39,	0,2003,3439,
#Partially deleted in new
chr6	31154741	31158189	chr6:31154741-31158189	0	-	31154741	31157038	789624	5	58,214,133,116,23,	0,1989,2281,2643,3425,
#Deleted in new
chr6	31156231	31158172	chr6:31156231-31158172	0	-	31156231	31156231	8553170	3	713,67,6,	0,791,1935,
#Deleted in new
chr6	31156750	31157772	chr6:31156750-31157772	0	-	31157128	31157600	789624	3	194,133,388,	0,272,634,
#Deleted in new
chr6	31156837	31158160	chr6:31156837-31158160	0	-	31156837	31157038	789624	4	107,67,143,162,	0,185,520,1161,
#Deleted in new
chr6	31156852	31157791	chr6:31156852-31157791	0	-	31156852	31157038	789624	2	92,769,	0,170,
#Partially deleted in new
chr6	31158541	31164215	chr6:31158541-31164215	1	+	31159469	31162717	789624	4	181,811,559,1739,	0,355,2905,3935,
#Partially deleted in new
chr6	31158546	31164215	chr6:31158546-31164215	1	+	31159469	31162717	789624	4	176,565,559,1739,	0,596,2900,3930,
#Partially deleted in new
chr6	31161448	31167159	chr6:31161448-31167159	2	+	31161448	31167008	789624	3	557,86,162,	0,4831,5549,
#Deleted in new
chr6	31161483	31163007	chr6:31161483-31163007	0	+	31161483	31161483	8553170	3	94,255,531,	0,267,993,
#Partially deleted in new
chr6	31164336	31170693	chr6:31164336-31170693	3	-	31164600	31170620	789624	5	531,159,131,121,478,	0,791,1234,1590,5879,
#Partially deleted in new
chr6	31164336	31180731	chr6:31164336-31180731	1	-	31164600	31165639	789624	5	531,159,131,121,113,	0,791,1234,1590,16282,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	31164346	31166838	chr6:31164346-31166838	1	-	31164600	31165639	789624	4	521,159,131,912,	0,781,1224,1580,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	31164347	31166838	chr6:31164347-31166838	1	-	31164600	31165942	789624	5	520,159,131,121,305,	0,780,1223,1579,2186,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	31164350	31166838	chr6:31164350-31166838	1	-	31164600	31165639	789624	5	517,159,131,121,305,	0,777,1220,1576,2183,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	31164350	31167170	chr6:31164350-31167170	1	-	31164600	31165639	789624	3	517,159,1600,	0,777,1220,
#Deleted in new
chr6	31164600	31165942	chr6:31164600-31165942	1	-	31164600	31165942	789624	4	267,159,131,16,	0,527,970,1326,
#Partially deleted in new
chr6	31165699	31170658	chr6:31165699-31170658	0	-	31165699	31165699	8553170	2	348,443,	0,4516,
#Deleted in new
chr6	31169917	31170620	chr6:31169917-31170620	1	-	31169917	31170620	789624	3	15,42,312,	0,345,391,
#Partially deleted in new
chr6	31173734	31177899	chr6:31173734-31177899	3	-	31173734	31173734	789624	3	299,33,261,	0,503,3904,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	31195199	31198037	chr6:31195199-31198037	3	-	31195199	31195199	8553170	1	2838,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	31197759	31203968	chr6:31197759-31203968	3	+	31197759	31197759	789624	2	123,1597,	0,4612,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	31197836	31203968	chr6:31197836-31203968	0	+	31197836	31197836	8553170	2	44,1597,	0,4535,
#Partially deleted in new
chr6	31198137	31203222	chr6:31198137-31203222	1	+	31198137	31198137	8553170	2	44,851,	0,4234,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	31198139	31200722	chr6:31198139-31200722	0	+	31198139	31198139	8553170	2	61,768,	0,1815,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	31200164	31201918	chr6:31200164-31201918	3	-	31200164	31200164	8553170	2	474,43,	0,1711,
#Deleted in new
chr6	31202012	31203015	chr6:31202012-31203015	0	+	31202012	31202012	8553170	2	41,644,	0,359,
#Deleted in new
chr6	31222912	31223093	chr6:31222912-31223093	7	+	31222912	31222912	16724991	1	181,	0,
#Deleted in new
chr6	31224341	31225058	chr6:31224341-31225058	7	-	31224341	31224341	16724991	3	17,171,96,	0,343,621,
#Deleted in new
chr6	31268748	31272086	chr6:31268748-31272086	3	-	31269168	31272071	0	8	425,48,33,120,276,276,270,88,	0,589,744,1217,1461,2324,2850,3250,
#Deleted in new
chr6	31268748	31272105	chr6:31268748-31272105	0	-	31271278	31272071	789624	8	425,48,33,120,276,259,270,107,	0,589,744,1217,1461,2324,2850,3250,
#Deleted in new
chr6	31268748	31272086	chr6:31268748-31272086	1	-	31269168	31272071	789624	8	425,48,51,120,276,276,270,88,	0,589,744,1217,1461,2324,2850,3250,
#Deleted in new
chr6	31268748	31269666	chr6:31268748-31269666	0	-	31268748	31268748	8553170	2	425,329,	0,589,
#Deleted in new
chr6	31268748	31270422	chr6:31268748-31270422	0	-	31268748	31268748	8553170	4	425,48,593,213,	0,589,744,1461,
#Deleted in new
chr6	31268748	31272050	chr6:31268748-31272050	0	-	31268748	31268748	8553170	6	425,48,33,120,276,978,	0,589,744,1217,1461,2324,
#Deleted in new
chr6	31269338	31272071	chr6:31269338-31272071	1	-	31269338	31271328	789624	8	47,33,120,276,276,100,51,73,	0,154,627,871,1734,2260,2479,2660,
#Partially deleted in new
chr6	31269490	31355404	chr6:31269490-31355404	1	-	31269490	31355404	789624	3	35,117,88,	0,85616,85826,
#Deleted in new
chr6	31270213	31272069	chr6:31270213-31272069	0	-	31270213	31272069	789624	5	118,47,276,270,71,	0,225,859,1385,1785,
#Deleted in new
chr6	31270220	31272130	chr6:31270220-31272130	0	-	31270220	31270220	8553170	3	265,276,532,	0,852,1378,
#Deleted in new
chr6	31271098	31272090	chr6:31271098-31272090	0	-	31271098	31271098	8553170	2	770,92,	0,900,
#Deleted in new
chr6	31275571	31278754	chr6:31275571-31278754	7	+	31275571	31275571	16724991	1	3183,	0,
#Deleted in new
chr6	31280316	31281519	chr6:31280316-31281519	7	+	31280316	31280316	16724991	1	1203,	0,
#Deleted in new
chr6	31287509	31288964	chr6:31287509-31288964	7	-	31287509	31287509	16724991	1	1455,	0,
#Partially deleted in new
chr6	31293907	31301642	chr6:31293907-31301642	3	-	31293907	31293907	789624	4	214,81,70,171,	0,307,1036,7564,
#Deleted in new
chr6	31307814	31308549	chr6:31307814-31308549	7	-	31307814	31307814	16724991	2	233,73,	0,662,
#Deleted in new
chr6	31353871	31357187	chr6:31353871-31357187	3	-	31354482	31357158	0	8	425,48,33,117,276,276,270,102,	0,607,761,1235,1445,2295,2816,3214,
#Deleted in new
chr6	31353871	31354806	chr6:31353871-31354806	0	-	31353871	31353871	8553170	2	425,328,	0,607,
#Deleted in new
chr6	31353871	31355076	chr6:31353871-31355076	0	-	31353871	31353871	8553170	3	425,48,444,	0,607,761,
#Deleted in new
chr6	31354479	31357158	chr6:31354479-31357158	1	-	31354479	31357158	789624	8	3,41,29,121,276,276,270,73,	0,6,153,623,837,1687,2208,2606,
#Deleted in new
chr6	31354500	31355404	chr6:31354500-31355404	1	-	31354500	31355404	789624	3	26,33,88,	0,132,816,
#Deleted in new
chr6	31355121	31355802	chr6:31355121-31355802	0	-	31355121	31355121	8553170	2	102,486,	0,195,
#Deleted in new
chr6	31355223	31355316	chr6:31355223-31355316	3	-	31355223	31355223	5263520	1	93,	0,
#Deleted in new
chr6	31355390	31357179	chr6:31355390-31357179	0	-	31355390	31355390	8553170	3	202,791,94,	0,776,1695,
#Deleted in new
chr6	31355506	31357188	chr6:31355506-31357188	0	-	31355506	31357063	789624	3	86,276,501,	0,660,1181,
#Deleted in new
chr6	31355521	31356905	chr6:31355521-31356905	0	-	31355521	31355521	8553170	2	921,218,	0,1166,
#Deleted in new
chr6	31356646	31357637	chr6:31356646-31357637	7	+	31356646	31356646	16724991	1	991,	0,
#Deleted in new
chr6	31366351	31366898	chr6:31366351-31366898	7	-	31366351	31366351	16724991	1	547,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	31367056	31376088	chr6:31367056-31376088	3	+	31367056	31367056	8553170	2	274,1206,	0,7826,
#Partially deleted in new
chr6	31377418	31378019	chr6:31377418-31378019	7	+	31377418	31377418	16724991	1	601,	0,
#Partially deleted in new
chr6	31380410	31380839	chr6:31380410-31380839	7	+	31380410	31380410	16724991	1	429,	0,
#Deleted in new
chr6	31382073	31382288	chr6:31382073-31382288	7	-	31382073	31382073	16724991	2	5,48,	0,167,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	31394288	31395495	chr6:31394288-31395495	3	-	31394288	31394288	8553170	1	1207,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	31399783	31415313	chr6:31399783-31415313	1	+	31410763	31412431	789624	6	1000,255,288,279,136,302,	0,10759,11288,12163,12541,15228,
#Partially deleted in new
chr6	31400701	31465809	chr6:31400701-31465809	3	+	31400701	31400701	8553170	3	62,157,2439,	0,62421,62669,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	31402151	31402250	chr6:31402151-31402250	3	-	31402151	31402151	8553170	1	99,	0,
#Partially deleted in new
chr6	31403578	31415315	chr6:31403578-31415315	3	+	31403632	31412431	789624	6	124,255,288,279,136,304,	0,6964,7493,8368,8746,11433,
#Partially deleted in new
chr6	31403671	31415315	chr6:31403671-31415315	0	+	31403671	31412431	789624	5	31,255,279,136,304,	0,6871,8275,8653,11340,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	31441666	31446973	chr6:31441666-31446973	3	+	31441666	31441666	789624	2	645,1496,	0,3811,
#Deleted in new
chr6	31462727	31463336	chr6:31462727-31463336	7	-	31462727	31462727	16724991	1	609,	0,
#Deleted in new
chr6	31463181	31465704	chr6:31463181-31465704	0	+	31463181	31463181	789624	2	98,2334,	0,189,
#Deleted in new
chr6	31463184	31463821	chr6:31463184-31463821	0	+	31463184	31463184	8553170	3	95,138,232,	0,186,405,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	31463184	31477506	chr6:31463184-31477506	0	+	31463184	31463184	8553170	2	95,480,	0,13842,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	31494880	31511123	chr6:31494880-31511123	1	+	31505642	31509909	789624	6	115,255,288,279,132,1342,	0,10736,11262,12141,12519,14901,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	31496688	31496790	chr6:31496688-31496790	3	-	31496688	31496688	8553170	1	102,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	31498085	31511124	chr6:31498085-31511124	3	+	31498193	31509909	789624	6	178,255,159,279,132,1343,	0,7531,8186,8936,9314,11696,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	31498114	31511124	chr6:31498114-31511124	1	+	31498193	31509909	789624	6	149,255,288,279,132,1343,	0,7502,8028,8907,9285,11667,
#Deleted in new
chr6	31505934	31507531	chr6:31505934-31507531	0	+	31505934	31505934	8553170	3	496,279,132,	0,1087,1465,
#Deleted in new
chr6	31515978	31516211	chr6:31515978-31516211	7	+	31515978	31515978	16724991	1	233,	0,
#Partially deleted in new
chr6	31519479	31520291	chr6:31519479-31520291	7	-	31519479	31519479	16724991	2	171,327,	0,485,
#Partially deleted in new
chr6	31528113	31528693	chr6:31528113-31528693	7	+	31528113	31528113	16724991	1	580,	0,
#Partially deleted in new
chr6	31528716	31530232	chr6:31528716-31530232	3	+	31529014	31529935	789624	2	469,486,	0,1030,
#Partially deleted in new
chr6	31530218	31540536	chr6:31530218-31540536	1	-	31530793	31540532	789624	10	232,171,145,110,132,119,184,93,128,215,	0,560,834,1077,2561,5148,6281,8544,8928,10103,
#Partially deleted in new
chr6	31530218	31546582	chr6:31530218-31546582	3	-	31542031	31546559	789624	13	232,148,145,110,132,119,184,93,128,343,199,101,105,	0,560,834,1077,2561,5148,6281,8544,8928,10103,11731,15890,16259,
#Partially deleted in new
chr6	31530218	31542448	chr6:31530218-31542448	1	-	31530433	31540532	0	11	232,148,145,110,132,119,184,93,128,343,499,	0,560,834,1077,2561,5148,6281,8544,8928,10103,11731,
#Partially deleted in new
chr6	31530218	31542448	chr6:31530218-31542448	3	-	31530433	31540532	0	11	232,148,145,110,132,119,184,93,128,213,499,	0,560,834,1077,2561,5148,6281,8544,8928,10103,11731,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	31530218	31542017	chr6:31530218-31542017	0	-	31530218	31530218	8553170	10	232,148,145,110,2706,184,93,128,213,68,	0,560,834,1077,2561,6281,8544,8928,10103,11731,
#Partially deleted in new
chr6	31530218	31531744	chr6:31530218-31531744	0	-	31530218	31530218	8553170	4	232,148,145,449,	0,560,834,1077,
#Partially deleted in new
chr6	31530218	31535475	chr6:31530218-31535475	0	-	31531105	31535475	789624	6	232,148,126,110,132,109,	0,560,834,1077,2561,5148,
#Partially deleted in new
chr6	31530242	31530935	chr6:31530242-31530935	0	-	31530242	31530242	8553170	2	507,111,	0,582,
#Partially deleted in new
chr6	31530778	31534511	chr6:31530778-31534511	0	-	31530778	31534511	789624	5	148,145,110,132,26,	0,274,517,2001,3707,
#Partially deleted in new
chr6	31531115	31531671	chr6:31531115-31531671	0	-	31531115	31531115	8553170	2	63,376,	0,180,
#Partially deleted in new
chr6	31531273	31542401	chr6:31531273-31542401	0	-	31531273	31531273	8553170	6	132,132,119,184,213,452,	0,1506,4093,5226,9048,10676,
#Partially deleted in new
chr6	31531301	31541981	chr6:31531301-31541981	0	-	31531301	31540519	789624	6	104,132,119,184,343,32,	0,1478,4065,5198,9020,10648,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	31532412	31542001	chr6:31532412-31542001	0	-	31532412	31532412	8553170	5	3073,184,93,128,1680,	0,4087,6350,6734,7909,
#Partially deleted in new
chr6	31532779	31541531	chr6:31532779-31541531	0	-	31532779	31540532	789624	7	132,119,184,93,128,213,136,	0,2587,3720,5983,6367,7542,8616,
#Partially deleted in new
chr6	31535387	31542018	chr6:31535387-31542018	0	-	31535387	31540532	789624	6	98,184,93,128,245,69,	0,1112,3375,3759,4934,6562,
#Partially deleted in new
chr6	31535394	31541484	chr6:31535394-31541484	0	-	31535394	31540532	789624	6	91,184,93,128,343,89,	0,1105,3368,3752,4927,6001,
#Partially deleted in new
chr6	31535406	31541937	chr6:31535406-31541937	0	-	31535406	31540532	789624	6	79,184,93,128,343,105,	0,1093,3356,3740,4915,6426,
#Partially deleted in new
chr6	31536373	31536449	chr6:31536373-31536449	3	-	31536373	31536373	789624	1	76,	0,
#Partially deleted in new
chr6	31536608	31541989	chr6:31536608-31541989	0	-	31536608	31540532	789624	5	75,177,128,213,40,	0,2154,2538,3713,5341,
#Partially deleted in new
chr6	31536622	31541729	chr6:31536622-31541729	0	-	31536622	31541700	789624	5	61,93,128,213,96,	0,2140,2524,3699,5011,
#Partially deleted in new
chr6	31538818	31541986	chr6:31538818-31541986	0	-	31538818	31540532	789624	5	37,128,343,175,37,	0,328,1503,2334,3131,
#Partially deleted in new
chr6	31538830	31541991	chr6:31538830-31541991	0	-	31538830	31541195	789624	5	25,128,213,175,42,	0,316,1491,2322,3119,
#Partially deleted in new
chr6	31538881	31542003	chr6:31538881-31542003	0	-	31538881	31540532	789624	4	58,128,343,54,	0,265,1440,3068,
#Partially deleted in new
chr6	31540413	31546608	chr6:31540413-31546608	0	-	31542031	31546559	789624	4	121,199,101,131,	0,1536,5695,6064,
#Partially deleted in new
chr6	31541100	31541178	chr6:31541100-31541178	3	-	31541100	31541100	789624	1	78,	0,
#Partially deleted in new
chr6	31542197	31546593	chr6:31542197-31546593	0	-	31542197	31542197	8553170	4	246,61,101,116,	0,2500,3911,4280,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	31542303	31543127	chr6:31542303-31543127	3	+	31542303	31542303	789624	2	93,423,	0,401,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	31542372	31543138	chr6:31542372-31543138	0	+	31542372	31542372	8553170	2	24,430,	0,336,
#Partially deleted in new
chr6	31544461	31546844	chr6:31544461-31546844	3	-	31545407	31546559	789624	3	1120,101,367,	0,1647,2016,
#Partially deleted in new
chr6	31544461	31546637	chr6:31544461-31546637	1	-	31545407	31546559	789624	3	1078,23,160,	0,1725,2016,
#Partially deleted in new
chr6	31545237	31546848	chr6:31545237-31546848	1	-	31545407	31546168	789624	3	344,101,217,	0,871,1394,
#Partially deleted in new
chr6	31545275	31548427	chr6:31545275-31548427	0	-	31545407	31548427	789624	3	306,101,202,	0,833,2950,
#Partially deleted in new
chr6	31545283	31546755	chr6:31545283-31546755	0	-	31545283	31545283	8553170	3	298,161,124,	0,765,1348,
#Partially deleted in new
chr6	31545755	31546593	chr6:31545755-31546593	0	-	31545755	31545755	8553170	2	454,116,	0,722,
#Partially deleted in new
chr6	31546869	31558829	chr6:31546869-31558829	0	+	31548174	31558611	789624	4	104,277,222,808,	0,1293,10758,11152,
#Partially deleted in new
chr6	31547580	31558829	chr6:31547580-31558829	3	+	31547694	31558611	789624	4	171,277,222,808,	0,582,10047,10441,
#Partially deleted in new
chr6	31547612	31558829	chr6:31547612-31558829	1	+	31547694	31558611	789624	4	139,277,177,808,	0,550,10015,10409,
#Partially deleted in new
chr6	31547639	31557705	chr6:31547639-31557705	0	+	31547694	31556740	789624	4	112,277,87,78,	0,523,9057,9988,
#Partially deleted in new
chr6	31547660	31557959	chr6:31547660-31557959	0	+	31547660	31547660	8553170	3	91,277,332,	0,502,9967,
#Partially deleted in new
chr6	31572053	31574324	chr6:31572053-31574324	3	+	31572742	31573693	0	4	249,108,106,1044,	0,680,874,1227,
#Partially deleted in new
chr6	31572269	31574324	chr6:31572269-31574324	0	+	31572269	31572269	8553170	3	33,300,1044,	0,464,1011,
#Partially deleted in new
chr6	31572282	31574324	chr6:31572282-31574324	1	+	31572742	31573693	0	4	164,108,106,1044,	0,451,645,998,
#Partially deleted in new
chr6	31572293	31574324	chr6:31572293-31574324	0	+	31572293	31572293	8553170	3	153,300,1044,	0,440,987,
#Partially deleted in new
chr6	31575566	31578336	chr6:31575566-31578336	3	+	31575741	31577537	0	4	361,46,48,1221,	0,967,1200,1549,
#Partially deleted in new
chr6	31580524	31582522	chr6:31580524-31582522	0	-	31580524	31580524	8553170	3	639,72,27,	0,1034,1971,
#Partially deleted in new
chr6	31580554	31582425	chr6:31580554-31582425	3	-	31580708	31582417	0	4	609,72,46,170,	0,1004,1259,1701,
#Partially deleted in new
chr6	31580554	31582427	chr6:31580554-31582427	1	-	31581558	31582417	0	3	609,72,172,	0,1004,1701,
#Partially deleted in new
chr6	31580623	31582406	chr6:31580623-31582406	0	-	31580623	31580623	8553170	2	540,848,	0,935,
#Partially deleted in new
chr6	31586123	31588909	chr6:31586123-31588909	1	+	31587299	31588676	789624	4	192,119,23,392,	0,1076,1820,2394,
#Partially deleted in new
chr6	31586178	31588909	chr6:31586178-31588909	3	+	31587299	31588676	789624	5	137,119,93,23,392,	0,1021,1462,1765,2339,
#Partially deleted in new
chr6	31586193	31588909	chr6:31586193-31588909	0	+	31586193	31586193	8553170	2	122,1710,	0,1006,
#Partially deleted in new
chr6	31586216	31588909	chr6:31586216-31588909	1	+	31587299	31588585	789624	3	99,119,347,	0,983,2346,
#Partially deleted in new
chr6	31586216	31588909	chr6:31586216-31588909	1	+	31587299	31588585	789624	3	99,119,392,	0,983,2301,
#Partially deleted in new
chr6	31586219	31588757	chr6:31586219-31588757	1	+	31587299	31588676	789624	4	96,119,23,195,	0,980,1724,2343,
#Partially deleted in new
chr6	31586698	31588810	chr6:31586698-31588810	1	+	31587299	31588585	789624	4	109,119,93,314,	0,501,942,1798,
#Partially deleted in new
chr6	31586847	31588810	chr6:31586847-31588810	1	+	31587299	31588585	789624	3	92,119,293,	0,352,1670,
#Partially deleted in new
chr6	31586894	31587730	chr6:31586894-31587730	0	+	31587299	31587730	789624	3	45,119,90,	0,305,746,
#Partially deleted in new
chr6	31587021	31588909	chr6:31587021-31588909	1	+	31587299	31588585	789624	2	297,392,	0,1496,
#Partially deleted in new
chr6	31587053	31588909	chr6:31587053-31588909	1	+	31587299	31588676	789624	3	265,23,392,	0,890,1464,
#Partially deleted in new
chr6	31587085	31587841	chr6:31587085-31587841	0	+	31587085	31587085	8553170	4	21,119,93,26,	0,114,555,730,
#Partially deleted in new
chr6	31587116	31588626	chr6:31587116-31588626	0	+	31587299	31588626	789624	4	202,93,23,64,	0,524,827,1446,
#Partially deleted in new
chr6	31587199	31588909	chr6:31587199-31588909	1	+	31587299	31588585	789624	3	119,93,392,	0,441,1318,
#Partially deleted in new
chr6	31587199	31588908	chr6:31587199-31588908	1	+	31587299	31588676	789624	3	119,23,412,	0,744,1297,
#Partially deleted in new
chr6	31587199	31588662	chr6:31587199-31588662	1	+	31587299	31588585	789624	2	119,166,	0,1297,
#Partially deleted in new
chr6	31587199	31588909	chr6:31587199-31588909	1	+	31587299	31588676	789624	4	119,93,23,413,	0,441,744,1297,
#Partially deleted in new
chr6	31587254	31588757	chr6:31587254-31588757	0	+	31587254	31587254	8553170	3	64,151,240,	0,561,1263,
#Partially deleted in new
chr6	31587299	31588909	chr6:31587299-31588909	1	+	31587299	31588585	789624	3	19,93,347,	0,341,1263,
#Partially deleted in new
chr6	31587315	31588676	chr6:31587315-31588676	0	+	31587315	31588585	789624	4	3,93,18,159,	0,325,633,1202,
#Partially deleted in new
chr6	31587668	31588757	chr6:31587668-31588757	0	+	31587668	31588585	789624	3	65,18,195,	0,280,894,
#Partially deleted in new
chr6	31588894	31592985	chr6:31588894-31592985	3	-	31589066	31592721	0	4	282,108,345,307,	0,631,887,3784,
#Partially deleted in new
chr6	31588894	31592985	chr6:31588894-31592985	1	-	31589193	31592721	0	4	337,108,345,307,	0,631,887,3784,
#Partially deleted in new
chr6	31588894	31592959	chr6:31588894-31592959	0	-	31588894	31588894	8553170	4	337,108,345,103,	0,631,887,3962,
#Partially deleted in new
chr6	31588894	31592812	chr6:31588894-31592812	0	-	31588894	31588894	8553170	4	337,108,118,22,	0,631,887,3896,
#Partially deleted in new
chr6	31589273	31592985	chr6:31589273-31592985	1	-	31589311	31592721	0	4	115,108,345,307,	0,252,508,3405,
#Partially deleted in new
chr6	31589296	31592749	chr6:31589296-31592749	1	-	31589311	31592721	0	5	92,108,118,152,71,	0,229,485,678,3382,
#Deleted in new
chr6	31611082	31611356	chr6:31611082-31611356	7	-	31611082	31611082	16724991	1	274,	0,
#Deleted in new
chr6	31615183	31617021	chr6:31615183-31617021	3	+	31615329	31616900	0	6	171,62,67,42,163,206,	0,337,486,920,1160,1632,
#Deleted in new
chr6	31615216	31616340	chr6:31615216-31616340	0	+	31615216	31615216	8553170	3	77,62,671,	0,304,453,
#Deleted in new
chr6	31615226	31617021	chr6:31615226-31617021	0	+	31615226	31616900	789624	6	67,62,67,42,163,206,	0,294,443,877,1117,1589,
#Deleted in new
chr6	31615279	31617021	chr6:31615279-31617021	0	+	31615279	31615279	8553170	4	75,62,837,206,	0,241,390,1536,
#Deleted in new
chr6	31615990	31617021	chr6:31615990-31617021	1	+	31616111	31616900	0	3	155,163,206,	0,353,825,
#Partially deleted in new
chr6	31620719	31637771	chr6:31620719-31637771	3	+	31622789	31637586	789624	31	139,175,178,100,73,144,152,80,143,91,217,475,191,298,211,1854,269,131,130,86,225,141,72,168,83,211,99,213,95,91,326,	0,2007,3012,3541,3730,4451,4740,5072,5300,6052,6262,7045,8424,8828,9871,10419,12659,13139,13516,13752,14033,14412,14674,14862,15247,15489,15790,16013,16322,16514,16726,
#Partially deleted in new
chr6	31620723	31626862	chr6:31620723-31626862	0	+	31620723	31620723	8553170	8	135,100,73,144,152,80,143,91,	0,3537,3726,4447,4736,5068,5296,6048,
#Partially deleted in new
chr6	31620724	31637771	chr6:31620724-31637771	1	+	31622789	31637586	789624	31	134,212,178,100,73,144,152,80,143,91,217,475,191,298,211,1854,269,131,130,86,225,141,72,168,83,211,99,213,95,91,326,	0,1965,3007,3536,3725,4446,4735,5067,5295,6047,6257,7040,8419,8823,9866,10414,12654,13134,13511,13747,14028,14407,14669,14857,15242,15484,15785,16008,16317,16509,16721,
#Deleted in new
chr6	31623078	31623210	chr6:31623078-31623210	3	+	31623078	31623078	789624	1	132,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	31624901	31625497	chr6:31624901-31625497	0	+	31624901	31624901	8553170	2	413,38,	0,558,
#Partially deleted in new
chr6	31625753	31627074	chr6:31625753-31627074	0	+	31625753	31625753	8553170	3	409,91,93,	0,1018,1228,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	31628639	31629768	chr6:31628639-31629768	0	+	31628639	31628639	8553170	2	695,221,	0,908,
#Deleted in new
chr6	31633786	31633858	chr6:31633786-31633858	3	+	31633786	31633786	5263520	1	72,	0,
#Deleted in new
chr6	31633953	31634756	chr6:31633953-31634756	0	+	31633953	31633953	8553170	2	412,285,	0,518,
#Deleted in new
chr6	31634406	31635316	chr6:31634406-31635316	0	+	31634406	31634406	8553170	2	571,185,	0,725,
#Deleted in new
chr6	31635241	31635709	chr6:31635241-31635709	0	+	31635241	31635241	8553170	2	31,316,	0,152,
#Deleted in new
chr6	31635359	31636250	chr6:31635359-31636250	0	+	31635359	31635359	8553170	2	690,42,	0,849,
#Deleted in new
chr6	31635375	31636811	chr6:31635375-31636811	0	+	31635375	31635375	8553170	4	90,468,211,302,	0,206,833,1134,
#Deleted in new
chr6	31636246	31637771	chr6:31636246-31637771	0	+	31636246	31636246	8553170	5	173,99,213,95,538,	0,263,486,795,987,
#Deleted in new
chr6	31636535	31637771	chr6:31636535-31637771	0	+	31636535	31636535	8553170	3	73,404,538,	0,197,698,
#Deleted in new
chr6	31636834	31637771	chr6:31636834-31637771	0	+	31636834	31636834	8553170	3	302,91,326,	0,399,611,
#Partially deleted in new
chr6	31639027	31652705	chr6:31639027-31652705	3	-	31639130	31651763	0	25	199,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,282,	0,472,1171,1357,1617,1764,2076,2292,2511,2748,3084,3801,4862,5054,5497,5918,6379,7366,8563,9649,9883,10171,10482,12628,13396,
#Partially deleted in new
chr6	31639027	31652393	chr6:31639027-31652393	1	-	31639130	31651763	0	25	199,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,147,	0,472,1171,1357,1617,1764,2076,2292,2511,2748,3084,3801,4862,5054,5497,5918,6379,7366,8563,9649,9883,10171,10482,12628,13219,
#Deleted in new
chr6	31639027	31640937	chr6:31639027-31640937	0	-	31639130	31640937	789624	4	199,108,60,146,	0,1171,1617,1764,
#Deleted in new
chr6	31639027	31641228	chr6:31639027-31641228	0	-	31639130	31641228	789624	6	199,108,144,60,147,125,	0,1171,1357,1617,1764,2076,
#Deleted in new
chr6	31639027	31640539	chr6:31639027-31640539	0	-	31639027	31639027	8553170	4	199,147,108,155,	0,472,1171,1357,
#Deleted in new
chr6	31639027	31639788	chr6:31639027-31639788	0	-	31639027	31639027	8553170	2	199,289,	0,472,
#Partially deleted in new
chr6	31639028	31652700	chr6:31639028-31652700	1	-	31639130	31651763	0	24	198,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,277,	0,1170,1356,1616,1763,2075,2291,2510,2747,3083,3800,4861,5053,5496,5917,6378,7365,8562,9648,9882,10170,10481,12627,13395,
#Partially deleted in new
chr6	31639028	31652700	chr6:31639028-31652700	1	-	31639130	31651763	0	25	198,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,254,75,54,197,118,121,301,	0,471,1170,1356,1616,1763,2075,2291,2510,2747,3083,3800,4861,5053,5496,5917,6378,7365,8562,9648,9882,10170,10481,12627,13371,
#Partially deleted in new
chr6	31639028	31652700	chr6:31639028-31652700	1	-	31639130	31651763	0	23	198,108,60,147,125,103,54,170,189,15,85,113,78,253,198,130,236,75,54,197,118,121,277,	0,1170,1616,1763,2075,2291,2510,2747,3083,4072,4861,5053,5496,5917,6378,7365,8562,9648,9882,10170,10481,12627,13395,
#Deleted in new
chr6	31640824	31642145	chr6:31640824-31642145	0	-	31640824	31640824	8553170	3	768,170,34,	0,951,1287,
#Partially deleted in new
chr6	31641847	31644316	chr6:31641847-31644316	0	-	31641847	31641847	8553170	5	98,292,287,88,235,	0,264,981,2042,2234,
#Partially deleted in new
chr6	31642218	31652678	chr6:31642218-31652678	0	-	31642218	31651763	789624	16	185,287,88,113,108,78,253,198,130,236,75,54,197,118,121,166,	0,610,1671,1863,2088,2306,2727,3188,4175,5372,6458,6692,6980,7291,9437,10294,
#Partially deleted in new
chr6	31642683	31644200	chr6:31642683-31644200	0	-	31642683	31642683	8553170	3	432,88,119,	0,1206,1398,
#Partially deleted in new
chr6	31642831	31645069	chr6:31642831-31645069	0	-	31642831	31645069	789624	5	284,88,113,105,124,	0,1058,1250,1693,2114,
#Partially deleted in new
chr6	31642958	31645561	chr6:31642958-31645561	0	-	31642958	31642958	8553170	4	157,88,253,155,	0,931,1987,2448,
#Partially deleted in new
chr6	31643112	31645503	chr6:31643112-31645503	0	-	31643112	31645503	789624	5	3,88,113,253,97,	0,777,969,1833,2294,
#Partially deleted in new
chr6	31644316	31652386	chr6:31644316-31652386	0	-	31644316	31651763	789624	12	98,78,253,198,130,236,75,54,197,118,121,152,	0,208,629,1090,2077,3274,4360,4594,4882,5193,7339,7918,
#Deleted in new
chr6	31644493	31645185	chr6:31644493-31645185	0	-	31644493	31644493	8553170	2	109,240,	0,452,
#Partially deleted in new
chr6	31647590	31651920	chr6:31647590-31651920	0	-	31647590	31651763	789624	6	236,75,197,118,121,19,	0,1086,1608,1919,4065,4311,
#Partially deleted in new
chr6	31647590	31652158	chr6:31647590-31652158	0	-	31647590	31651763	789624	7	236,75,54,197,118,121,79,	0,1086,1320,1608,1919,4065,4489,
#Partially deleted in new
chr6	31647590	31652358	chr6:31647590-31652358	0	-	31647590	31651763	789624	6	236,75,197,118,121,112,	0,1086,1608,1919,4065,4656,
#Partially deleted in new
chr6	31647592	31652153	chr6:31647592-31652153	0	-	31647592	31651763	789624	7	234,75,54,197,118,121,252,	0,1084,1318,1606,1917,4063,4309,
#Partially deleted in new
chr6	31647593	31652648	chr6:31647593-31652648	0	-	31647593	31651763	789624	6	233,75,197,118,121,249,	0,1083,1605,1916,4062,4806,
#Partially deleted in new
chr6	31647599	31651975	chr6:31647599-31651975	0	-	31647599	31651763	789624	7	227,75,54,197,118,121,110,	0,1077,1311,1599,1910,4056,4266,
#Partially deleted in new
chr6	31647603	31652667	chr6:31647603-31652667	0	-	31647603	31651763	789624	7	223,75,54,197,118,121,268,	0,1073,1307,1595,1906,4052,4796,
#Partially deleted in new
chr6	31647679	31652323	chr6:31647679-31652323	0	-	31647679	31651763	789624	6	147,75,197,118,121,89,	0,997,1519,1830,3976,4555,
#Partially deleted in new
chr6	31647705	31652445	chr6:31647705-31652445	0	-	31647705	31651763	789624	6	121,75,197,118,121,22,	0,971,1493,1804,3950,4718,
#Partially deleted in new
chr6	31647787	31651979	chr6:31647787-31651979	0	-	31647787	31651763	789624	6	39,75,54,197,118,324,	0,889,1123,1411,1722,3868,
#Partially deleted in new
chr6	31648911	31652115	chr6:31648911-31652115	0	-	31648911	31651763	789624	5	53,197,118,121,55,	0,287,598,2744,3149,
#Partially deleted in new
chr6	31652415	31658082	chr6:31652415-31658082	1	+	31656573	31657788	789624	5	136,155,74,99,458,	0,4056,4809,4964,5209,
#Partially deleted in new
chr6	31652416	31658210	chr6:31652416-31658210	1	+	31656573	31658089	0	6	135,155,74,99,99,147,	0,4055,4808,4963,5208,5647,
#Partially deleted in new
chr6	31655470	31658210	chr6:31655470-31658210	3	+	31655966	31658089	0	6	610,155,74,99,99,147,	0,1001,1754,1909,2154,2593,
#Deleted in new
chr6	31658297	31660772	chr6:31658297-31660772	3	-	31659062	31659947	789624	1	2475,	0,
#Deleted in new
chr6	31658328	31660721	chr6:31658328-31660721	3	+	31658328	31658328	8553170	2	351,322,	0,2071,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	31661228	31666283	chr6:31661228-31666283	3	-	31662265	31664478	789624	4	1482,725,163,423,	0,2624,3612,4632,
#Partially deleted in new
chr6	31662075	31665630	chr6:31662075-31665630	1	-	31662265	31664478	789624	4	635,728,163,72,	0,1777,2765,3483,
#Partially deleted in new
chr6	31662075	31665850	chr6:31662075-31665850	1	-	31662265	31664478	789624	4	635,725,163,277,	0,1777,2765,3498,
#Partially deleted in new
chr6	31662075	31665390	chr6:31662075-31665390	1	-	31662265	31664478	789624	3	635,725,550,	0,1777,2765,
#Partially deleted in new
chr6	31662075	31665861	chr6:31662075-31665861	1	-	31662265	31664478	789624	4	635,728,163,288,	0,1777,2765,3498,
#Deleted in new
chr6	31663984	31665442	chr6:31663984-31665442	0	-	31663984	31664478	789624	3	596,163,43,	0,856,1415,
#Deleted in new
chr6	31664022	31665190	chr6:31664022-31665190	0	-	31664022	31664478	789624	3	558,163,101,	0,818,1067,
#Deleted in new
chr6	31664209	31665185	chr6:31664209-31665185	0	-	31664209	31664478	789624	3	368,163,96,	0,631,880,
#Partially deleted in new
chr6	31665235	31670070	chr6:31665235-31670070	1	+	31665447	31669926	789624	7	258,83,103,116,76,190,235,	0,1585,2632,3303,3861,4083,4600,
#Partially deleted in new
chr6	31666063	31670070	chr6:31666063-31670070	3	+	31666831	31669926	0	7	145,83,103,116,76,190,235,	0,757,1804,2475,3033,3255,3772,
#Partially deleted in new
chr6	31666080	31670343	chr6:31666080-31670343	0	+	31666080	31666080	8553170	5	128,83,103,970,508,	0,740,1787,2458,3755,
#Partially deleted in new
chr6	31666086	31668241	chr6:31666086-31668241	0	+	31666086	31666086	8553170	3	122,83,374,	0,734,1781,
#Partially deleted in new
chr6	31666093	31669464	chr6:31666093-31669464	0	+	31666093	31666093	8553170	5	115,83,103,116,368,	0,727,1774,2445,3003,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	31666100	31667302	chr6:31666100-31667302	0	+	31666100	31666100	8553170	2	108,482,	0,720,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	31666101	31673546	chr6:31666101-31673546	3	+	31666831	31671864	789624	8	107,83,103,116,76,190,129,1683,	0,719,1766,2437,2995,3217,5054,5762,
#Partially deleted in new
chr6	31666291	31670070	chr6:31666291-31670070	1	+	31666831	31669926	0	7	105,83,103,116,76,190,235,	0,529,1576,2247,2805,3027,3544,
#Partially deleted in new
chr6	31666354	31670070	chr6:31666354-31670070	1	+	31666831	31669926	0	7	133,83,103,116,76,190,235,	0,466,1513,2184,2742,2964,3481,
#Partially deleted in new
chr6	31666819	31672346	chr6:31666819-31672346	1	+	31666831	31672282	789624	6	84,103,116,76,129,483,	0,1048,1719,2277,4336,5044,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	31669117	31673546	chr6:31669117-31673546	0	+	31669117	31672282	789624	4	55,36,129,1683,	0,1855,2038,2746,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	31670166	31673546	chr6:31670166-31673546	3	+	31670950	31672282	789624	3	842,129,1683,	0,989,1697,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	31670378	31672462	chr6:31670378-31672462	1	+	31671262	31672282	789624	2	906,599,	0,1485,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	31672380	31673776	chr6:31672380-31673776	0	+	31672380	31672380	8553170	2	61,616,	0,780,
#Partially deleted in new
chr6	31676683	31684040	chr6:31676683-31684040	0	-	31676956	31684040	789624	4	437,168,292,53,	0,2417,6366,7304,
#Partially deleted in new
chr6	31676699	31681476	chr6:31676699-31681476	0	-	31676699	31676699	8553170	3	421,168,247,	0,2401,4530,
#Partially deleted in new
chr6	31676739	31680377	chr6:31676739-31680377	3	-	31676956	31680373	789624	3	381,168,125,	0,2361,3513,
#Partially deleted in new
chr6	31676847	31684040	chr6:31676847-31684040	0	-	31676847	31676847	8553170	4	273,168,172,53,	0,2253,4382,7140,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	31676956	31680364	chr6:31676956-31680364	0	-	31676956	31676956	8553170	2	164,1264,	0,2144,
#Partially deleted in new
chr6	31676956	31680364	chr6:31676956-31680364	0	-	31679264	31680364	789624	3	164,168,206,	0,2144,3202,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	31681347	31681960	chr6:31681347-31681960	0	-	31681347	31681347	8553170	2	54,315,	0,298,
#Partially deleted in new
chr6	31686948	31703444	chr6:31686948-31703444	3	-	31687211	31703281	789624	20	347,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,67,57,295,	0,549,693,875,1092,1300,1774,2066,2632,3129,3590,4630,4855,6078,6410,9999,13993,14325,15125,16201,
#Deleted in new
chr6	31686954	31688389	chr6:31686954-31688389	0	-	31686954	31686954	8553170	5	341,47,99,77,349,	0,543,687,869,1086,
#Deleted in new
chr6	31686954	31690602	chr6:31686954-31690602	0	-	31686954	31686954	8553170	10	341,47,99,77,63,57,397,124,50,64,	0,543,687,869,1086,1294,1768,2626,3123,3584,
#Partially deleted in new
chr6	31686958	31703073	chr6:31686958-31703073	0	-	31702089	31702768	789624	20	337,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,67,57,462,	0,539,683,865,1082,1290,1764,2056,2622,3119,3580,4620,4845,6068,6400,9989,13983,14315,15115,15653,
#Partially deleted in new
chr6	31686961	31714072	chr6:31686961-31714072	3	-	31712101	31713812	789624	22	334,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,67,57,99,126,312,	0,536,680,862,1079,1287,1761,2053,2619,3116,3577,4617,4842,6065,6397,9986,13980,14312,15112,25055,25702,26799,
#Partially deleted in new
chr6	31686988	31703340	chr6:31686988-31703340	0	-	31701019	31703281	789624	19	307,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,57,191,	0,509,653,835,1052,1260,1734,2026,2592,3089,3550,4590,4815,6038,6370,9959,13953,15085,16161,
#Partially deleted in new
chr6	31687185	31703070	chr6:31687185-31703070	1	-	31687211	31702768	789624	18	110,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,459,	0,312,456,638,855,1063,1537,1829,2395,2892,3353,4393,4618,5841,6173,9762,13756,15426,
#Deleted in new
chr6	31687386	31688321	chr6:31687386-31688321	0	-	31687386	31687386	8553170	4	158,99,77,281,	0,255,437,654,
#Deleted in new
chr6	31687574	31688303	chr6:31687574-31688303	0	-	31687574	31687574	8553170	3	166,77,263,	0,249,466,
#Deleted in new
chr6	31687652	31690245	chr6:31687652-31690245	0	-	31687652	31687652	8553170	8	88,77,63,57,64,105,124,168,	0,171,388,596,1070,1362,1928,2425,
#Deleted in new
chr6	31687772	31691646	chr6:31687772-31691646	0	-	31687772	31687772	8553170	8	128,265,64,105,124,50,64,68,	0,268,950,1242,1808,2305,2766,3806,
#Partially deleted in new
chr6	31689014	31703356	chr6:31689014-31703356	0	-	31701019	31703281	789624	11	105,124,50,64,102,115,123,74,86,87,207,	0,566,1063,1524,2564,2789,4012,4344,7933,11927,14135,
#Deleted in new
chr6	31691445	31693056	chr6:31691445-31693056	0	-	31691445	31691445	8553170	3	235,115,30,	0,358,1581,
#Deleted in new
chr6	31691588	31692294	chr6:31691588-31692294	0	-	31691588	31691588	8553170	2	92,491,	0,215,
#Partially deleted in new
chr6	31691648	31703300	chr6:31691648-31703300	0	-	31701019	31703281	789624	6	32,115,123,74,87,151,	0,155,1378,1710,9293,11501,
#Partially deleted in new
chr6	31692751	31703311	chr6:31692751-31703311	0	-	31701019	31703281	789624	6	398,74,86,87,57,162,	0,607,4196,8190,9322,10398,
#Partially deleted in new
chr6	31692893	31702984	chr6:31692893-31702984	0	-	31702089	31702768	789624	7	256,74,86,87,67,57,373,	0,465,4054,8048,8380,9180,9718,
#Deleted in new
chr6	31701028	31701091	chr6:31701028-31701091	3	-	31701028	31701028	5263520	1	63,	0,
#Partially deleted in new
chr6	31706884	31710595	chr6:31706884-31710595	3	+	31706906	31710591	789624	6	74,330,264,156,67,29,	0,573,986,3141,3467,3682,
#Partially deleted in new
chr6	31706903	31717918	chr6:31706903-31717918	3	+	31706906	31717804	789624	6	55,330,264,156,123,338,	0,554,967,3122,8598,10677,
#Partially deleted in new
chr6	31711770	31714065	chr6:31711770-31714065	1	-	31712101	31713887	789624	3	345,126,305,	0,893,1990,
#Partially deleted in new
chr6	31712335	31713812	chr6:31712335-31713812	3	-	31712340	31713812	789624	3	205,126,52,	0,328,1425,
#Partially deleted in new
chr6	31712340	31713812	chr6:31712340-31713812	0	-	31712538	31713812	789624	2	449,52,	0,1420,
#Partially deleted in new
chr6	31712340	31713812	chr6:31712340-31713812	0	-	31712538	31713812	789624	3	221,126,52,	0,323,1420,
#Partially deleted in new
chr6	31715355	31717804	chr6:31715355-31717804	0	+	31715355	31717804	789624	3	55,123,345,	0,146,2104,
#Partially deleted in new
chr6	31715355	31717804	chr6:31715355-31717804	3	+	31715355	31717804	789624	3	55,123,224,	0,146,2225,
#Partially deleted in new
chr6	31715355	31717804	chr6:31715355-31717804	0	+	31715355	31715355	8553170	2	269,224,	0,2225,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	31718593	31725035	chr6:31718593-31725035	0	+	31718593	31718593	8553170	7	90,135,43,348,91,258,66,	0,4410,4808,5045,5548,5993,6376,
#Partially deleted in new
chr6	31718647	31721845	chr6:31718647-31721845	3	-	31719095	31721679	789624	3	663,111,218,	0,1445,2980,
#Partially deleted in new
chr6	31718647	31721679	chr6:31718647-31721679	1	-	31719095	31719305	789624	4	663,111,111,52,	0,1445,2305,2980,
#Deleted in new
chr6	31723343	31725074	chr6:31723343-31725074	1	+	31723383	31724873	789624	5	101,348,91,41,329,	0,295,798,1243,1402,
#Deleted in new
chr6	31723343	31724973	chr6:31723343-31724973	1	+	31723383	31724886	789624	5	101,348,91,41,209,	0,295,798,1243,1421,
#Deleted in new
chr6	31723369	31725074	chr6:31723369-31725074	1	+	31723383	31725074	789624	5	75,348,41,99,105,	0,269,1217,1376,1600,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	31723372	31726714	chr6:31723372-31726714	1	+	31723383	31725043	789624	6	72,348,91,41,99,1745,	0,266,769,1214,1373,1597,
#Deleted in new
chr6	31723372	31725034	chr6:31723372-31725034	0	+	31723383	31724622	789624	6	72,207,74,41,99,65,	0,266,786,1214,1373,1597,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	31723372	31726714	chr6:31723372-31726714	3	+	31723383	31725074	789624	6	72,348,91,41,80,1745,	0,266,769,1214,1392,1597,
#Deleted in new
chr6	31723379	31724276	chr6:31723379-31724276	0	+	31723379	31723379	8553170	3	65,348,135,	0,259,762,
#Deleted in new
chr6	31723383	31725074	chr6:31723383-31725074	1	+	31723383	31725043	789624	4	61,348,99,105,	0,255,1362,1586,
#Deleted in new
chr6	31723383	31725181	chr6:31723383-31725181	1	+	31723383	31725074	789624	6	61,348,91,41,80,212,	0,255,758,1203,1381,1586,
#Deleted in new
chr6	31723383	31725074	chr6:31723383-31725074	1	+	31723383	31725074	789624	4	61,348,80,105,	0,255,1381,1586,
#Deleted in new
chr6	31723383	31725074	chr6:31723383-31725074	0	+	31723383	31723383	8553170	5	61,348,91,258,105,	0,255,758,1203,1586,
#Deleted in new
chr6	31727037	31730263	chr6:31727037-31730263	1	-	31727236	31729161	789624	7	316,150,120,74,100,357,213,	0,505,1135,1413,1608,1827,3013,
#Deleted in new
chr6	31727037	31729792	chr6:31727037-31729792	1	-	31727236	31729161	789624	6	316,150,120,74,100,928,	0,505,1135,1413,1608,1827,
#Deleted in new
chr6	31727037	31730617	chr6:31727037-31730617	3	-	31727236	31729161	789624	7	316,150,120,74,100,361,567,	0,505,1135,1413,1608,1827,3013,
#Deleted in new
chr6	31727037	31728877	chr6:31727037-31728877	0	-	31727196	31728877	789624	6	316,101,120,74,100,13,	0,505,1135,1413,1608,1827,
#Deleted in new
chr6	31727037	31729507	chr6:31727037-31729507	0	-	31727037	31727037	8553170	4	316,150,573,643,	0,505,1135,1827,
#Deleted in new
chr6	31727037	31730227	chr6:31727037-31730227	0	-	31727037	31727037	8553170	6	316,150,120,74,100,177,	0,505,1135,1413,1608,3013,
#Deleted in new
chr6	31727037	31730262	chr6:31727037-31730262	0	-	31727037	31727037	8553170	5	316,150,120,100,212,	0,505,1135,1608,3013,
#Deleted in new
chr6	31727574	31729796	chr6:31727574-31729796	0	-	31727574	31729161	789624	6	118,120,74,100,361,114,	0,598,876,1071,1290,2108,
#Deleted in new
chr6	31727605	31729501	chr6:31727605-31729501	0	-	31727605	31729161	789624	6	87,120,74,100,361,140,	0,567,845,1040,1259,1756,
#Deleted in new
chr6	31728180	31730245	chr6:31728180-31730245	0	-	31728180	31728180	8553170	3	565,361,195,	0,684,1870,
#Partially deleted in new
chr6	31730580	31736572	chr6:31730580-31736572	1	-	31730841	31736300	0	7	423,182,107,126,110,151,28,	0,1636,2985,3255,3573,5681,5964,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	31730580	31737318	chr6:31730580-31737318	1	-	31730841	31736300	0	7	423,182,107,126,110,89,523,	0,1636,2985,3255,3573,5681,6215,
#Partially deleted in new
chr6	31730580	31736567	chr6:31730580-31736567	1	-	31730841	31736300	0	6	423,182,107,126,110,306,	0,1636,2985,3255,3573,5681,
#Partially deleted in new
chr6	31730580	31739763	chr6:31730580-31739763	3	-	31730841	31736300	0	8	423,182,107,126,110,89,125,35,	0,1636,2985,3255,3573,5681,8683,9148,
#Partially deleted in new
chr6	31730582	31736545	chr6:31730582-31736545	1	-	31730841	31736300	0	7	421,182,107,126,110,89,63,	0,1634,2983,3253,3571,5679,5900,
#Partially deleted in new
chr6	31739947	31762834	chr6:31739947-31762834	3	+	31740466	31762531	789624	25	273,160,124,81,63,122,110,36,83,46,139,63,129,73,110,81,88,190,127,150,75,144,138,74,415,	0,506,1215,2929,3160,3956,4242,4598,5289,7439,13353,13619,18217,18600,18818,19149,19477,19838,20142,20742,21240,21524,21870,22164,22472,
#Partially deleted in new
chr6	31739950	31762676	chr6:31739950-31762676	1	+	31740466	31762531	789624	25	112,160,124,81,63,122,110,36,83,46,139,63,129,73,110,81,88,190,127,150,75,144,138,74,257,	0,503,1212,2926,3157,3953,4239,4595,5286,7436,13350,13616,18214,18597,18815,19146,19474,19835,20139,20739,21237,21521,21867,22161,22469,
#Partially deleted in new
chr6	31739990	31744234	chr6:31739990-31744234	0	+	31740466	31744234	789624	8	72,27,160,124,81,63,122,45,	0,203,463,1172,2886,3117,3913,4199,
#Partially deleted in new
chr6	31740004	31743480	chr6:31740004-31743480	0	+	31740004	31740004	8553170	5	58,160,124,81,373,	0,449,1158,2872,3103,
#Partially deleted in new
chr6	31740019	31764850	chr6:31740019-31764850	3	+	31740466	31762531	789624	29	43,160,124,81,63,122,161,36,83,46,139,63,129,73,110,81,88,190,127,150,75,144,138,74,749,141,96,90,415,	0,434,1143,2857,3088,3884,4119,4526,5217,7367,13281,13547,18145,18528,18746,19077,19405,19766,20070,20670,21168,21452,21798,22092,22400,23395,24044,24246,24416,
#Partially deleted in new
chr6	31740020	31762676	chr6:31740020-31762676	1	+	31740466	31762531	789624	25	42,160,124,81,63,122,110,36,83,46,139,63,129,73,110,81,88,190,127,150,78,144,138,74,257,	0,433,1142,2856,3087,3883,4169,4525,5216,7366,13280,13546,18144,18527,18745,19076,19404,19765,20069,20669,21164,21451,21797,22091,22399,
#Partially deleted in new
chr6	31740020	31762676	chr6:31740020-31762676	1	+	31740466	31762531	789624	25	42,160,124,81,63,122,161,36,83,46,139,63,129,73,110,81,88,190,127,150,78,144,48,74,257,	0,433,1142,2856,3087,3883,4118,4525,5216,7366,13280,13546,18144,18527,18745,19076,19404,19765,20069,20669,21164,21451,21797,22091,22399,
#Partially deleted in new
chr6	31740225	31762589	chr6:31740225-31762589	0	+	31740466	31761237	789624	24	388,124,81,63,122,110,36,83,46,139,63,129,73,110,81,88,190,127,52,75,144,138,74,170,	0,937,2651,2882,3678,3964,4320,5011,7161,13075,13341,17939,18322,18540,18871,19199,19560,19864,20562,20962,21246,21592,21886,22194,
#Partially deleted in new
chr6	31741245	31762635	chr6:31741245-31762635	0	+	31741245	31747411	789624	22	41,81,63,122,110,36,46,139,63,129,73,110,81,88,190,127,150,75,144,138,74,216,	0,1631,1862,2658,2944,3300,6141,12055,12321,16919,17302,17520,17851,18179,18540,18844,19444,19942,20226,20572,20866,21174,
#Partially deleted in new
chr6	31743977	31759491	chr6:31743977-31759491	0	+	31743977	31759491	789624	12	48,110,36,83,46,139,63,129,88,110,81,67,	0,212,568,1259,3409,9323,9589,14187,14555,14788,15119,15447,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	31744230	31754040	chr6:31744230-31754040	0	+	31744230	31747411	789624	5	69,36,46,139,474,	0,315,3156,9070,9336,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	31751495	31759134	chr6:31751495-31759134	0	+	31751495	31751495	8553170	6	158,139,63,129,110,38,	0,1805,2071,6669,7270,7601,
#Partially deleted in new
chr6	31753282	31759501	chr6:31753282-31759501	0	+	31753282	31753282	8553170	7	157,63,129,73,110,81,77,	0,284,4882,5265,5483,5814,6142,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	31756591	31762676	chr6:31756591-31762676	1	+	31758128	31762531	789624	14	325,872,73,110,81,88,190,127,150,75,144,138,74,257,	0,830,1956,2174,2505,2833,3194,3498,4098,4596,4880,5226,5520,5828,
#Deleted in new
chr6	31756950	31757053	chr6:31756950-31757053	3	-	31756950	31756950	8553170	1	103,	0,
#Deleted in new
chr6	31758194	31759502	chr6:31758194-31759502	0	+	31758194	31758194	8553170	4	99,73,110,406,	0,353,571,902,
#Deleted in new
chr6	31759444	31764850	chr6:31759444-31764850	0	+	31759444	31761788	789624	14	68,190,127,150,75,144,116,74,151,379,141,96,90,415,	0,341,645,1245,1743,2027,2305,2667,2975,3345,3970,4619,4821,4991,
#Deleted in new
chr6	31759531	31760173	chr6:31759531-31760173	0	+	31759531	31759531	8553170	2	444,84,	0,558,
#Deleted in new
chr6	31759916	31762676	chr6:31759916-31762676	0	+	31759916	31761930	789624	8	59,127,75,144,31,90,74,257,	0,173,1271,1555,1833,1949,2195,2503,
#Deleted in new
chr6	31760719	31763144	chr6:31760719-31763144	0	+	31760719	31760719	8553170	7	120,75,144,48,74,151,94,	0,468,752,1098,1392,1700,2331,
#Deleted in new
chr6	31761211	31762676	chr6:31761211-31762676	0	+	31761211	31762531	789624	5	51,144,90,74,257,	0,260,654,900,1208,
#Deleted in new
chr6	31761922	31762676	chr6:31761922-31762676	0	+	31761922	31761922	8553170	2	263,257,	0,497,
#Deleted in new
chr6	31762443	31764851	chr6:31762443-31764851	0	+	31762443	31762531	789624	4	127,141,96,586,	0,971,1620,1822,
#Deleted in new
chr6	31762798	31764159	chr6:31762798-31764159	0	+	31763054	31764159	789624	3	370,141,96,	0,616,1265,
#Deleted in new
chr6	31762995	31764851	chr6:31762995-31764851	3	+	31763054	31764531	789624	5	173,141,96,90,416,	0,419,1068,1270,1440,
#Deleted in new
chr6	31762995	31764845	chr6:31762995-31764845	1	+	31763054	31764531	789624	4	173,141,96,410,	0,419,1068,1440,
#Deleted in new
chr6	31763619	31764299	chr6:31763619-31764299	0	+	31763619	31763619	8553170	2	540,34,	0,646,
#Partially deleted in new
chr6	31764309	31765588	chr6:31764309-31765588	3	-	31764309	31764309	789624	2	411,50,	0,1229,
#Partially deleted in new
chr6	31765589	31777294	chr6:31765589-31777294	3	-	31765593	31776779	789624	17	181,175,140,302,93,153,133,186,117,113,170,196,111,97,279,249,186,	0,293,655,873,1568,1772,2032,3428,4085,4411,7364,7652,8926,9743,10374,10956,11519,
#Deleted in new
chr6	31766036	31767687	chr6:31766036-31767687	0	-	31766036	31766036	8553170	5	21,520,93,153,66,	0,208,1121,1325,1585,
#Partially deleted in new
chr6	31766288	31777272	chr6:31766288-31777272	0	-	31766288	31766288	8553170	15	96,302,93,153,133,186,117,113,170,80,111,97,79,249,164,	0,174,869,1073,1333,2729,3386,3712,6665,6953,8227,9044,9875,10257,10820,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	31771269	31773007	chr6:31771269-31773007	0	-	31771269	31771269	8553170	2	554,54,	0,1684,
#Deleted in new
chr6	31776058	31776919	chr6:31776058-31776919	0	-	31776058	31776058	8553170	2	184,374,	0,487,
#Partially deleted in new
chr6	31777517	31795953	chr6:31777517-31795953	3	-	31777593	31795217	789624	30	145,326,112,207,156,128,79,69,105,126,71,106,91,159,104,125,91,95,109,120,82,165,128,101,85,125,139,135,420,408,	0,1449,1907,2090,2480,2923,3187,3352,3501,3963,4173,4329,4569,4767,5012,5203,5578,6696,6876,7077,7728,8051,14092,14353,14699,14874,15239,15468,17313,18028,
#Deleted in new
chr6	31777517	31778182	chr6:31777517-31778182	0	-	31777517	31777517	8553170	2	145,247,	0,418,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	31778816	31778905	chr6:31778816-31778905	3	-	31778816	31778816	8553170	1	89,	0,
#Deleted in new
chr6	31779229	31780051	chr6:31779229-31780051	0	-	31779229	31779229	8553170	3	63,112,444,	0,195,378,
#Deleted in new
chr6	31780454	31782589	chr6:31780454-31782589	0	-	31780454	31782589	789624	10	114,79,69,105,126,71,106,91,42,60,	0,250,415,564,1026,1236,1392,1632,1947,2075,
#Deleted in new
chr6	31780550	31782194	chr6:31780550-31782194	0	-	31780550	31780550	8553170	8	18,79,69,105,126,71,106,154,	0,154,319,468,930,1140,1296,1490,
#Deleted in new
chr6	31780876	31781925	chr6:31780876-31781925	0	-	31780876	31780876	8553170	3	62,105,445,	0,142,604,
#Deleted in new
chr6	31780877	31781750	chr6:31780877-31781750	0	-	31780877	31780877	8553170	2	61,732,	0,141,
#Deleted in new
chr6	31781357	31782420	chr6:31781357-31782420	0	-	31781357	31781357	8553170	3	249,262,334,	0,333,729,
#Deleted in new
chr6	31781692	31783239	chr6:31781692-31783239	0	-	31781692	31781692	8553170	6	69,106,91,159,316,144,	0,154,394,592,837,1403,
#Deleted in new
chr6	31781699	31782429	chr6:31781699-31782429	0	-	31781699	31781699	8553170	4	62,106,137,145,	0,147,341,585,
#Partially deleted in new
chr6	31782411	31784435	chr6:31782411-31784435	0	-	31782411	31782411	8553170	4	434,91,95,42,	0,684,1802,1982,
#Partially deleted in new
chr6	31784597	31792960	chr6:31784597-31792960	0	-	31784597	31784597	8553170	8	117,82,165,128,101,85,125,204,	0,648,971,7012,7273,7619,7794,8159,
#Partially deleted in new
chr6	31785245	31792278	chr6:31785245-31792278	0	-	31785245	31785245	8553170	5	82,165,128,221,62,	0,323,6364,6625,6971,
#Partially deleted in new
chr6	31792985	31795499	chr6:31792985-31795499	0	-	31792985	31795217	789624	2	135,669,	0,1845,
#Partially deleted in new
chr6	31797395	31806984	chr6:31797395-31806984	3	-	31797756	31806757	0	5	487,60,31,68,230,	0,594,1081,8679,9359,
#Partially deleted in new
chr6	31797395	31806817	chr6:31797395-31806817	0	-	31797395	31797395	8553170	4	487,60,31,63,	0,594,1081,9359,
#Partially deleted in new
chr6	31797395	31806852	chr6:31797395-31806852	0	-	31797395	31797395	8553170	4	487,60,68,98,	0,594,8679,9359,
#Partially deleted in new
chr6	31797395	31806966	chr6:31797395-31806966	0	-	31797395	31797395	8553170	3	487,68,212,	0,8679,9359,
#Partially deleted in new
chr6	31797395	31806659	chr6:31797395-31806659	0	-	31797395	31797395	8553170	5	487,60,31,68,174,	0,594,1081,8679,9090,
#Partially deleted in new
chr6	31797395	31806660	chr6:31797395-31806660	0	-	31797395	31797395	8553170	5	487,60,31,47,142,	0,594,1081,8679,9123,
#Partially deleted in new
chr6	31809618	31815065	chr6:31809618-31815065	3	-	31810046	31811972	0	2	2367,177,	0,5270,
#Deleted in new
chr6	31815463	31817946	chr6:31815463-31817946	3	+	31815756	31817682	0	1	2483,	0,
#Deleted in new
chr6	31815542	31817946	chr6:31815542-31817946	1	+	31815756	31817682	789624	2	289,1620,	0,784,
#Partially deleted in new
chr6	31827734	31830255	chr6:31827734-31830255	3	+	31827950	31829876	0	1	2521,	0,
#Partially deleted in new
chr6	31828833	31839719	chr6:31828833-31839719	3	+	31828833	31828833	8553170	4	920,41,200,177,	0,6577,8402,10709,
#Partially deleted in new
chr6	31834607	31839761	chr6:31834607-31839761	0	+	31834607	31834607	8553170	4	593,41,200,219,	0,803,2628,4935,
#Partially deleted in new
chr6	31834626	31839761	chr6:31834626-31839761	0	+	31834626	31834626	8553170	4	142,41,200,219,	0,784,2609,4916,
#Partially deleted in new
chr6	31834907	31839761	chr6:31834907-31839761	0	+	31834907	31834907	8553170	4	150,41,200,219,	0,503,2328,4635,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	31834907	31839761	chr6:31834907-31839761	0	+	31834907	31834907	8553170	5	293,41,94,200,219,	0,503,1516,2328,4635,
#Partially deleted in new
chr6	31834907	31839761	chr6:31834907-31839761	0	+	31834907	31834907	8553170	3	293,200,219,	0,2328,4635,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	31834917	31839761	chr6:31834917-31839761	0	+	31834917	31834917	8553170	5	283,41,219,200,219,	0,493,1381,2318,4625,
#Partially deleted in new
chr6	31834921	31839766	chr6:31834921-31839766	1	+	31837328	31839663	789624	3	279,200,224,	0,2314,4621,
#Partially deleted in new
chr6	31834921	31839766	chr6:31834921-31839766	3	+	31837328	31839663	789624	4	279,45,200,224,	0,489,2314,4621,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	31834931	31839761	chr6:31834931-31839761	0	+	31834931	31834931	8553170	5	269,41,223,200,219,	0,479,1363,2304,4611,
#Partially deleted in new
chr6	31835262	31835326	chr6:31835262-31835326	3	+	31835262	31835262	789624	1	64,	0,
#Partially deleted in new
chr6	31835287	31839764	chr6:31835287-31839764	0	+	31835287	31835287	8553170	3	164,200,222,	0,1948,4255,
#Partially deleted in new
chr6	31836842	31839764	chr6:31836842-31839764	0	+	31836842	31836842	8553170	2	593,222,	0,2700,
#Partially deleted in new
chr6	31837075	31837142	chr6:31837075-31837142	3	+	31837075	31837075	789624	1	67,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	31857658	31862796	chr6:31857658-31862796	0	-	31857658	31857658	8553170	3	2287,2150,179,	0,2383,4959,
#Partially deleted in new
chr6	31859051	31862906	chr6:31859051-31862906	3	-	31859718	31862776	789624	6	894,223,183,263,193,289,	0,990,1387,2136,2947,3566,
#Partially deleted in new
chr6	31859051	31862805	chr6:31859051-31862805	0	-	31859051	31859051	8553170	4	1570,263,193,188,	0,2136,2947,3566,
#Partially deleted in new
chr6	31859051	31862822	chr6:31859051-31862822	0	-	31860172	31862776	789624	6	894,137,183,263,193,205,	0,990,1387,2136,2947,3566,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr6	31863191	31879001	chr6:31863191-31879001	3	-	31863626	31878980	789624	21	557,85,95,71,74,104,95,254,103,93,100,236,84,88,61,126,100,79,74,49,61,	0,1460,1624,1818,2123,2306,2498,2681,5963,6353,7411,7620,8122,8282,11268,11529,11737,12660,12864,13842,15749,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr6	31863194	31879046	chr6:31863194-31879046	1	-	31863626	31878980	789624	20	554,85,95,71,74,104,95,254,103,93,100,236,84,88,61,100,79,74,49,106,	0,1457,1621,1815,2120,2303,2495,2678,5960,6350,7408,7617,8119,8279,11265,11734,12657,12861,13839,15746,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr6	31863194	31877671	chr6:31863194-31877671	1	-	31863626	31875865	789624	21	554,85,95,71,74,104,95,254,103,93,100,236,84,88,61,126,100,79,74,49,109,	0,1457,1621,1815,2120,2303,2495,2678,5960,6350,7408,7617,8119,8279,11265,11526,11734,12657,12861,13839,14368,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr6	31863453	31877671	chr6:31863453-31877671	1	-	31863626	31875865	789624	21	295,85,95,71,74,104,95,254,100,96,100,236,84,88,61,126,100,79,74,49,109,	0,1198,1362,1556,1861,2044,2236,2419,5701,6088,7149,7358,7860,8020,11006,11267,11475,12398,12602,13580,14109,
#Partially deleted in new
chr6	31863576	31864680	chr6:31863576-31864680	0	-	31863576	31863576	8553170	2	172,220,	0,884,
#Partially deleted in new
chr6	31865689	31878967	chr6:31865689-31878967	0	-	31865689	31878967	789624	13	95,254,103,93,84,88,61,126,100,79,74,49,27,	0,183,3465,3855,5624,5784,8770,9031,9239,10162,10366,11344,13251,
#Partially deleted in new
chr6	31866058	31871202	chr6:31866058-31871202	0	-	31866058	31866058	8553170	4	68,103,93,391,	0,3096,3486,4753,
#Partially deleted in new
chr6	31869595	31871244	chr6:31869595-31871244	0	-	31869595	31869595	8553170	3	42,100,433,	0,1007,1216,
#Partially deleted in new
chr6	31874524	31878997	chr6:31874524-31878997	0	-	31874524	31874524	8553170	6	322,100,79,74,49,57,	0,404,1327,1531,2509,4416,
#Partially deleted in new
chr6	31874821	31878997	chr6:31874821-31878997	0	-	31874821	31874821	8553170	6	25,100,121,74,49,57,	0,107,988,1234,2212,4119,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	31877807	31884204	chr6:31877807-31884204	3	+	31877807	31877807	8553170	5	271,542,61,165,1532,	0,2436,3253,3588,4865,
#Partially deleted in new
chr6	31879758	31897222	chr6:31879758-31897222	1	-	31880083	31897202	789624	26	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,115,135,156,41,85,254,219,300,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9469,9709,12648,12935,13067,16504,16847,17164,
#Partially deleted in new
chr6	31879758	31897677	chr6:31879758-31897677	1	-	31880083	31897677	0	27	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,115,135,156,41,85,254,219,67,42,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9469,9709,12648,12935,13067,16504,16847,17164,17877,
#Partially deleted in new
chr6	31879758	31897684	chr6:31879758-31897684	3	-	31880083	31897677	0	28	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,102,115,135,156,41,85,254,219,67,49,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9210,9469,9709,12648,12935,13067,16504,16847,17164,17877,
#Partially deleted in new
chr6	31879758	31897202	chr6:31879758-31897202	1	-	31880083	31897202	789624	27	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,102,115,135,156,41,85,254,219,280,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9210,9469,9709,12648,12935,13067,16504,16847,17164,
#Partially deleted in new
chr6	31879758	31885141	chr6:31879758-31885141	0	-	31879758	31879758	8553170	9	506,176,79,87,116,78,145,408,230,	0,914,1255,2940,3135,3603,4047,4633,5153,
#Partially deleted in new
chr6	31879758	31884806	chr6:31879758-31884806	0	-	31879758	31879758	8553170	9	506,176,79,87,116,78,145,168,162,	0,914,1255,2940,3135,3603,4047,4633,4886,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr6	31879758	31896504	chr6:31879758-31896504	0	-	31879758	31879758	8553170	26	506,176,79,87,116,78,145,168,155,126,102,123,107,83,183,236,144,149,102,115,135,156,41,85,301,242,	0,914,1255,2940,3135,3603,4047,4633,4886,5132,6822,7016,7236,7818,8020,8282,8604,8840,9210,9469,9709,12648,12935,13067,13603,16504,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	31879758	31886437	chr6:31879758-31886437	0	-	31879758	31879758	8553170	10	506,176,79,87,116,78,145,168,155,1526,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	31883760	31884204	chr6:31883760-31884204	0	+	31883760	31883760	8553170	2	51,322,	0,122,
#Partially deleted in new
chr6	31883818	31887064	chr6:31883818-31887064	0	-	31883818	31887064	789624	7	132,168,155,144,102,123,70,	0,573,826,1093,2762,2956,3176,
#Partially deleted in new
chr6	31884672	31887119	chr6:31884672-31887119	0	-	31884672	31884672	8553170	4	127,105,102,345,	0,239,1908,2102,
#Partially deleted in new
chr6	31892417	31893186	chr6:31892417-31893186	0	-	31892417	31892417	8553170	3	145,41,361,	0,276,408,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	31895400	31897687	chr6:31895400-31897687	0	-	31895400	31895400	8553170	4	1116,219,67,52,	0,1205,1522,2235,
#Partially deleted in new
chr6	31897784	31945521	chr6:31897784-31945521	1	+	31933672	31945357	789624	14	158,174,139,141,90,141,95,112,166,77,92,127,50,344,	0,35825,38138,39534,41446,45174,45440,45631,45859,46132,46350,46942,47195,47393,
#Partially deleted in new
chr6	31897786	31944853	chr6:31897786-31944853	0	+	31933672	31944853	789624	13	156,174,99,139,141,90,141,95,112,166,77,92,127,	0,35823,36080,38136,39532,41444,45172,45438,45629,45857,46130,46348,46940,
#Deleted in new
chr6	31899606	31901992	chr6:31899606-31901992	3	-	31899925	31901305	789624	2	1719,156,	0,2230,
#Partially deleted in new
chr6	31900998	31945671	chr6:31900998-31945671	1	+	31901066	31945357	0	14	141,174,99,141,90,141,95,112,166,77,92,127,50,494,	0,32611,32868,36320,38232,41960,42226,42417,42645,42918,43136,43728,43981,44179,
#Partially deleted in new
chr6	31901003	31934295	chr6:31901003-31934295	0	+	31901066	31934295	789624	4	136,174,99,130,	0,32606,32863,33162,
#Partially deleted in new
chr6	31919940	31937459	chr6:31919940-31937459	0	+	31933672	31934210	789624	6	86,174,99,134,139,141,	0,13669,13926,14225,15982,17378,
#Partially deleted in new
chr6	31919983	31928894	chr6:31919983-31928894	0	+	31927752	31928894	789624	4	43,145,210,163,	0,7670,7971,8748,
#Partially deleted in new
chr6	31920095	31935990	chr6:31920095-31935990	0	+	31933672	31934210	789624	5	67,174,99,134,68,	0,13514,13771,14070,15827,
#Partially deleted in new
chr6	31927476	31945672	chr6:31927476-31945672	3	+	31927752	31945357	0	18	322,210,186,174,99,134,139,141,90,141,95,112,166,77,92,127,50,495,	0,478,1255,6133,6390,6689,8446,9842,11754,15482,15748,15939,16167,16440,16658,17250,17503,17701,
#Partially deleted in new
chr6	31927495	31945671	chr6:31927495-31945671	1	+	31927752	31945357	0	16	303,174,99,134,139,141,90,141,95,112,166,77,92,127,50,494,	0,6114,6371,6670,8427,9823,11735,15463,15729,15920,16148,16421,16639,17231,17484,17682,
#Partially deleted in new
chr6	31927524	31934245	chr6:31927524-31934245	0	+	31927752	31934245	789624	5	274,210,174,99,80,	0,430,6085,6342,6641,
#Partially deleted in new
chr6	31927697	31952048	chr6:31927697-31952048	3	+	31927752	31952030	789624	30	101,210,174,99,141,90,141,95,112,166,77,92,127,234,186,174,102,137,139,132,102,138,98,118,154,77,101,133,50,174,	0,257,5912,6169,9621,11533,15261,15527,15718,15946,16219,16437,17029,18675,19309,19650,20044,20247,20676,21132,21545,21722,22352,22588,22921,23170,23446,23643,23857,24177,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	31927702	31935058	chr6:31927702-31935058	1	+	31927752	31934437	789624	6	96,210,186,174,99,893,	0,252,1029,5907,6164,6463,
#Partially deleted in new
chr6	31927723	31952030	chr6:31927723-31952030	1	+	31927752	31952030	789624	28	75,210,186,141,90,95,112,166,77,92,127,9,186,174,102,137,139,132,102,138,98,118,154,77,101,133,50,156,	0,231,1008,9595,11507,15501,15692,15920,16193,16411,17003,17454,19283,19624,20018,20221,20650,21106,21519,21696,22326,22562,22895,23144,23420,23617,23831,24151,
#Partially deleted in new
chr6	31927738	31945391	chr6:31927738-31945391	0	+	31927752	31928762	789624	18	60,238,186,174,99,134,139,141,90,141,95,112,166,77,92,127,50,214,	0,216,993,5871,6128,6427,8184,9580,11492,15220,15486,15677,15905,16178,16396,16988,17241,17439,
#Partially deleted in new
chr6	31927762	31945624	chr6:31927762-31945624	0	+	31927762	31945357	789624	14	36,174,99,141,90,141,95,112,166,77,92,127,50,447,	0,5847,6104,9556,11468,15196,15462,15653,15881,16154,16372,16964,17217,17415,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	31932347	31934282	chr6:31932347-31934282	0	+	31932474	31934282	789624	4	146,174,99,117,	0,1262,1519,1818,
#Partially deleted in new
chr6	31934282	31943758	chr6:31934282-31943758	0	+	31934282	31943009	789624	8	17,139,141,90,185,95,112,115,	0,1640,3036,4948,8632,8942,9133,9361,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	31934473	31941724	chr6:31934473-31941724	3	-	31934473	31934473	789624	3	159,63,540,	0,866,6711,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	31936054	31945672	chr6:31936054-31945672	0	+	31936054	31936054	8553170	10	1405,90,141,95,112,166,77,92,127,495,	0,3176,6904,7170,7361,7589,7862,8080,8672,9123,
#Partially deleted in new
chr6	31943672	31945672	chr6:31943672-31945672	0	+	31943672	31943672	8553170	6	137,77,92,127,50,211,	0,244,462,1054,1307,1789,
#Deleted in new
chr6	31945649	31947141	chr6:31945649-31947141	0	+	31946221	31947141	789624	4	51,166,234,135,	0,470,723,1357,
#Deleted in new
chr6	31945708	31952084	chr6:31945708-31952084	3	+	31946221	31952030	0	18	577,234,186,174,102,137,139,132,102,138,98,118,154,77,101,133,50,210,	0,664,1298,1639,2033,2236,2665,3121,3534,3711,4341,4577,4910,5159,5435,5632,5846,6166,
#Deleted in new
chr6	31945974	31947120	chr6:31945974-31947120	0	+	31945974	31945974	8553170	2	311,748,	0,398,
#Deleted in new
chr6	31946125	31947969	chr6:31946125-31947969	0	+	31946221	31947082	789624	6	160,121,186,174,102,25,	0,360,881,1222,1616,1819,
#Deleted in new
chr6	31946221	31950645	chr6:31946221-31950645	0	+	31946221	31946221	8553170	12	64,234,186,174,102,137,139,132,102,138,98,360,	0,151,785,1126,1520,1723,2152,2608,3021,3198,3828,4064,
#Deleted in new
chr6	31947280	31949551	chr6:31947280-31949551	0	+	31947280	31947280	8553170	6	241,102,568,132,102,132,	0,461,664,1549,1962,2139,
#Deleted in new
chr6	31947796	31949598	chr6:31947796-31949598	0	+	31947796	31947796	8553170	6	47,137,139,132,102,179,	0,148,577,1033,1446,1623,
#Deleted in new
chr6	31948357	31949598	chr6:31948357-31949598	0	+	31948357	31948357	8553170	4	155,132,102,179,	0,472,885,1062,
#Deleted in new
chr6	31948459	31949257	chr6:31948459-31949257	0	+	31948459	31948459	8553170	2	53,428,	0,370,
#Deleted in new
chr6	31948955	31952053	chr6:31948955-31952053	0	+	31948955	31952030	789624	9	6,102,138,154,77,101,133,50,179,	0,287,464,1663,1912,2188,2385,2599,2919,
#Deleted in new
chr6	31948997	31949598	chr6:31948997-31949598	0	+	31948997	31948997	8553170	2	347,179,	0,422,
#Deleted in new
chr6	31949730	31951244	chr6:31949730-31951244	0	+	31949730	31949730	8553170	4	417,487,77,101,	0,555,1137,1413,
#Deleted in new
chr6	31950873	31952084	chr6:31950873-31952084	0	+	31950873	31950873	8553170	4	371,133,50,210,	0,467,681,1001,
#Deleted in new
chr6	31951414	31952084	chr6:31951414-31952084	0	+	31951414	31951700	789624	2	59,530,	0,140,
#Partially deleted in new
chr6	31952086	31959110	chr6:31952086-31959110	3	-	31952300	31958446	0	11	312,103,55,145,338,38,75,146,70,83,219,	0,1642,1993,2211,2468,2972,3132,4606,4854,6285,6805,
#Partially deleted in new
chr6	31952226	31959038	chr6:31952226-31959038	0	-	31952226	31952226	8553170	9	172,406,145,542,75,146,70,83,147,	0,1502,2071,2328,2992,4466,4714,6145,6665,
#Partially deleted in new
chr6	31952227	31958962	chr6:31952227-31958962	0	-	31952227	31952227	8553170	10	171,406,145,338,38,75,146,70,83,71,	0,1501,2070,2327,2831,2991,4465,4713,6144,6664,
#Partially deleted in new
chr6	31952227	31958919	chr6:31952227-31958919	0	-	31952227	31952227	8553170	9	171,103,55,145,542,75,146,70,548,	0,1501,1852,2070,2327,2991,4465,4713,6144,
#Partially deleted in new
chr6	31952228	31958852	chr6:31952228-31958852	1	-	31952300	31958683	0	11	170,103,55,145,338,38,75,146,70,83,182,	0,1500,1851,2069,2326,2830,2990,4464,4712,6143,6442,
#Partially deleted in new
chr6	31952228	31958960	chr6:31952228-31958960	1	-	31952300	31958446	0	11	170,103,55,145,248,38,75,146,70,83,69,	0,1500,1851,2069,2326,2830,2990,4464,4712,6143,6663,
#Partially deleted in new
chr6	31953757	31958957	chr6:31953757-31958957	0	-	31953757	31958446	789624	10	74,55,145,323,38,75,146,70,83,66,	0,322,540,797,1301,1461,2935,3183,4614,5134,
#Partially deleted in new
chr6	31954303	31958479	chr6:31954303-31958479	0	-	31954303	31958446	789624	7	139,338,38,75,146,70,108,	0,251,755,915,2389,2637,4068,
#Partially deleted in new
chr6	31954388	31958571	chr6:31954388-31958571	0	-	31954388	31958446	789624	7	54,323,38,75,146,70,200,	0,166,670,830,2304,2552,3983,
#Partially deleted in new
chr6	31954772	31958968	chr6:31954772-31958968	0	-	31956975	31958446	789624	7	30,38,75,146,70,147,77,	0,286,446,1920,2168,3535,4119,
#Partially deleted in new
chr6	31954819	31958859	chr6:31954819-31958859	0	-	31954819	31958446	789624	7	73,38,75,146,70,83,280,	0,239,399,1873,2121,3552,3760,
#Partially deleted in new
chr6	31955064	31958965	chr6:31955064-31958965	0	-	31955064	31955064	8553170	5	32,75,318,83,74,	0,154,1628,3307,3827,
#Partially deleted in new
chr6	31955083	31958954	chr6:31955083-31958954	0	-	31957399	31958446	789624	7	13,75,146,70,118,83,63,	0,135,1609,1857,2234,3288,3808,
#Deleted in new
chr6	31956838	31956940	chr6:31956838-31956940	3	-	31956838	31956838	5263520	1	102,	0,
#Deleted in new
chr6	31957399	31958446	chr6:31957399-31958446	1	-	31957399	31958446	789624	2	36,75,	0,972,
#Partially deleted in new
chr6	31959079	31969755	chr6:31959079-31969755	3	+	31959192	31969715	789624	28	135,104,110,118,115,75,54,191,129,146,147,85,107,147,97,213,111,231,138,138,105,148,127,211,111,219,141,241,	0,217,930,1140,1352,1586,1961,2116,2467,2829,3359,3634,3905,4333,4557,4833,5152,6703,7629,7924,8193,8635,8876,9248,9606,9791,10200,10435,
#Deleted in new
chr6	31959116	31961386	chr6:31959116-31961386	0	+	31959116	31959116	8553170	8	98,104,110,118,115,75,54,46,	0,180,893,1103,1315,1549,1924,2224,
#Partially deleted in new
chr6	31959140	31969751	chr6:31959140-31969751	0	+	31959140	31959140	8553170	23	74,104,110,118,115,75,635,146,147,378,147,97,213,111,231,138,138,105,148,127,211,467,472,	0,156,869,1079,1291,1525,1900,2768,3298,3573,4272,4496,4772,5091,6642,7568,7863,8132,8574,8815,9187,9482,10139,
#Deleted in new
chr6	31959156	31962814	chr6:31959156-31962814	0	+	31959192	31961641	789624	11	58,104,110,118,115,75,54,129,146,147,101,	0,140,853,1063,1275,1509,1884,2390,2752,3282,3557,
#Partially deleted in new
chr6	31959170	31969748	chr6:31959170-31969748	0	+	31959192	31961225	789624	24	44,104,54,191,129,146,147,85,107,147,97,213,111,231,138,138,105,148,127,211,111,219,141,234,	0,126,1870,2025,2376,2738,3268,3543,3814,4242,4466,4742,5061,6612,7538,7833,8102,8544,8785,9157,9515,9700,10109,10344,
#Deleted in new
chr6	31959190	31959958	chr6:31959190-31959958	0	+	31959190	31959190	8553170	2	24,662,	0,106,
#Deleted in new
chr6	31959192	31961225	chr6:31959192-31961225	1	+	31959192	31961225	789624	4	22,104,54,30,	0,104,1848,2003,
#Deleted in new
chr6	31961496	31963010	chr6:31961496-31963010	0	+	31961496	31961496	8553170	5	179,146,147,85,26,	0,412,942,1217,1488,
#Deleted in new
chr6	31966827	31968444	chr6:31966827-31968444	0	+	31966827	31966827	8553170	6	19,138,105,148,164,117,	0,176,445,887,1128,1500,
#Deleted in new
chr6	31967020	31968448	chr6:31967020-31968448	0	+	31967020	31967020	8553170	4	121,105,148,493,	0,252,694,935,
#Deleted in new
chr6	31967102	31968986	chr6:31967102-31968986	0	+	31967102	31967102	8553170	6	39,105,148,127,211,301,	0,170,612,853,1225,1583,
#Deleted in new
chr6	31967758	31969751	chr6:31967758-31969751	0	+	31967758	31968649	789624	6	104,127,211,174,219,472,	0,197,569,864,1112,1521,
#Deleted in new
chr6	31968322	31969751	chr6:31968322-31969751	0	+	31968322	31968322	8553170	4	139,189,141,237,	0,578,957,1192,
#Deleted in new
chr6	31968453	31969408	chr6:31968453-31969408	0	+	31968453	31968453	8553170	3	85,111,538,	0,232,417,
#Deleted in new
chr6	31968474	31969751	chr6:31968474-31969751	0	+	31968474	31969432	789624	4	64,111,219,472,	0,211,396,805,
#Deleted in new
chr6	31968523	31969587	chr6:31968523-31969587	0	+	31968523	31968523	8553170	5	15,111,219,37,73,	0,162,347,756,991,
#Deleted in new
chr6	31969809	31972292	chr6:31969809-31972292	3	-	31969876	31971675	789624	7	215,95,136,220,236,362,364,	0,299,533,796,1102,1510,2119,
#Deleted in new
chr6	31969809	31972252	chr6:31969809-31972252	0	-	31969809	31969809	8553170	4	215,95,136,1647,	0,299,533,796,
#Deleted in new
chr6	31969809	31972209	chr6:31969809-31972209	0	-	31969809	31969809	8553170	5	215,95,136,542,890,	0,299,533,796,1510,
#Deleted in new
chr6	31969809	31971685	chr6:31969809-31971685	0	-	31969809	31969809	8553170	5	215,95,483,236,366,	0,299,533,1102,1510,
#Deleted in new
chr6	31969812	31972290	chr6:31969812-31972290	1	-	31969876	31971675	789624	7	212,95,136,220,236,406,362,	0,296,530,793,1099,1507,2116,
#Deleted in new
chr6	31969814	31972095	chr6:31969814-31972095	0	-	31969814	31969814	8553170	3	210,1039,776,	0,294,1505,
#Deleted in new
chr6	31969814	31970923	chr6:31969814-31970923	0	-	31969876	31970923	789624	5	210,95,36,233,12,	0,294,528,778,1097,
#Deleted in new
chr6	31969816	31972238	chr6:31969816-31972238	0	-	31969816	31969816	8553170	6	208,95,136,147,236,310,	0,292,526,789,1095,2112,
#Deleted in new
chr6	31969843	31971984	chr6:31969843-31971984	1	-	31969876	31971675	789624	6	181,95,136,220,236,665,	0,265,499,762,1068,1476,
#Deleted in new
chr6	31969886	31971683	chr6:31969886-31971683	0	-	31969886	31969886	8553170	2	1261,364,	0,1433,
#Deleted in new
chr6	31969906	31972136	chr6:31969906-31972136	0	-	31970711	31971675	789624	7	118,95,136,147,236,406,208,	0,202,436,699,1005,1413,2022,
#Deleted in new
chr6	31969947	31972098	chr6:31969947-31972098	0	-	31969947	31969947	8553170	7	77,95,136,147,228,262,170,	0,161,395,658,964,1372,1981,
#Deleted in new
chr6	31970441	31972162	chr6:31970441-31972162	0	-	31970441	31970441	8553170	2	1240,234,	0,1487,
#Deleted in new
chr6	31970642	31971989	chr6:31970642-31971989	0	-	31970642	31970642	8553170	3	110,236,670,	0,269,677,
#Deleted in new
chr6	31970897	31972009	chr6:31970897-31972009	0	-	31970897	31970897	8553170	3	250,406,81,	0,422,1031,
#Partially deleted in new
chr6	31971090	31981446	chr6:31971090-31981446	0	+	31971090	31971090	789624	8	184,643,137,96,140,98,148,443,	0,778,1530,7812,8323,9360,9563,9913,
#Deleted in new
chr6	31971165	31972419	chr6:31971165-31972419	0	+	31971996	31972419	789624	3	109,348,118,	0,703,1136,
#Partially deleted in new
chr6	31971830	31981451	chr6:31971830-31981451	1	+	31971996	31981049	789624	8	386,210,137,96,140,98,148,448,	0,471,790,7072,7583,8620,8823,9173,
#Deleted in new
chr6	31971830	31973376	chr6:31971830-31973376	0	+	31971830	31971830	8553170	3	386,210,756,	0,471,790,
#Partially deleted in new
chr6	31971898	31981164	chr6:31971898-31981164	0	+	31971898	31971898	8553170	7	613,137,108,140,98,148,161,	0,722,7004,7515,8552,8755,9105,
#Partially deleted in new
chr6	31971943	31981446	chr6:31971943-31981446	3	+	31971996	31981049	789624	8	273,210,137,108,140,98,148,443,	0,358,677,6959,7470,8507,8710,9060,
#Partially deleted in new
chr6	31972339	31981209	chr6:31972339-31981209	0	+	31972339	31972339	8553170	6	172,137,96,1135,148,206,	0,281,6563,7074,8314,8664,
#Partially deleted in new
chr6	31972351	31979617	chr6:31972351-31979617	0	+	31972351	31972351	8553170	4	160,299,96,204,	0,269,6551,7062,
#Partially deleted in new
chr6	31972373	31979722	chr6:31972373-31979722	0	+	31972373	31972373	8553170	3	138,96,309,	0,6529,7040,
#Partially deleted in new
chr6	31972380	31981429	chr6:31972380-31981429	0	+	31972380	31978982	789624	6	131,96,140,98,148,426,	0,6522,7033,8070,8273,8623,
#Partially deleted in new
chr6	31972380	31982821	chr6:31972380-31982821	0	+	31972380	31978982	789624	8	131,96,140,98,148,185,199,104,	0,6522,7033,8070,8273,8623,9924,10337,
#Partially deleted in new
chr6	31972396	31980724	chr6:31972396-31980724	0	+	31972396	31972396	8553170	5	115,137,96,98,71,	0,224,6506,8054,8257,
#Partially deleted in new
chr6	31972534	31979613	chr6:31972534-31979613	0	+	31972534	31972534	8553170	3	223,106,200,	0,6368,6879,
#Partially deleted in new
chr6	31972554	31981446	chr6:31972554-31981446	0	+	31972554	31972554	8553170	6	203,96,140,98,148,443,	0,6348,6859,7896,8099,8449,
#Partially deleted in new
chr6	31972577	31979862	chr6:31972577-31979862	0	+	31972577	31972577	8553170	3	180,96,449,	0,6325,6836,
#Partially deleted in new
chr6	31972581	31981189	chr6:31972581-31981189	0	+	31972581	31972581	8553170	6	338,96,140,98,148,186,	0,6321,6832,7869,8072,8422,
#Deleted in new
chr6	31980390	31981446	chr6:31980390-31981446	0	+	31980390	31980390	8553170	2	411,443,	0,613,
#Partially deleted in new
chr6	31982023	32002681	chr6:31982023-32002681	3	+	31982107	32002540	0	41	149,199,202,71,89,83,97,106,133,116,180,183,186,159,127,75,198,112,71,140,210,52,90,210,76,157,117,172,233,168,60,94,187,91,75,103,90,99,84,133,283,	0,281,694,1105,1254,1561,1814,2049,2252,9168,9383,9708,10023,10362,10772,11066,11401,11690,11892,12221,12474,12928,13081,13306,13695,13931,14183,14405,14805,15120,15681,16790,16981,17282,17463,19029,19297,19472,19753,20099,20375,
#Partially deleted in new
chr6	31982067	32002672	chr6:31982067-32002672	1	+	31982107	32002540	0	40	105,199,202,71,89,83,97,106,133,116,180,183,186,159,127,75,198,112,71,140,210,52,90,210,76,157,117,172,233,168,60,94,140,75,103,90,99,84,133,274,	0,237,650,1061,1210,1517,1770,2005,2208,9124,9339,9664,9979,10318,10728,11022,11357,11646,11848,12177,12430,12884,13037,13262,13651,13887,14139,14361,14761,15076,15637,16746,16937,17419,18985,19253,19428,19709,20055,20331,
#Deleted in new
chr6	31982842	31983559	chr6:31982842-31983559	0	+	31982842	31982842	8553170	2	77,431,	0,286,
#Deleted in new
chr6	31982880	31984398	chr6:31982880-31984398	0	+	31982880	31982880	8553170	5	39,71,89,83,123,	0,248,397,704,1395,
#Deleted in new
chr6	31992176	31993976	chr6:31992176-31993976	0	+	31992176	31992176	8553170	6	56,159,127,75,198,263,	0,209,619,913,1248,1537,
#Deleted in new
chr6	31994407	31995352	chr6:31994407-31995352	0	+	31994407	31994407	8553170	4	300,52,90,23,	0,544,697,922,
#Deleted in new
chr6	31994580	31995627	chr6:31994580-31995627	0	+	31994580	31994580	8553170	4	127,52,90,298,	0,371,524,749,
#Deleted in new
chr6	31996516	31997396	chr6:31996516-31997396	0	+	31996516	31996516	8553170	3	84,233,253,	0,312,627,
#Deleted in new
chr6	31997657	31999561	chr6:31997657-31999561	0	+	31997657	31997657	8553170	5	107,94,187,91,75,	0,1156,1347,1648,1829,
#Deleted in new
chr6	31997741	31999719	chr6:31997741-31999719	0	+	31997741	31997741	8553170	5	23,94,187,91,233,	0,1072,1263,1564,1745,
#Deleted in new
chr6	31998850	31999530	chr6:31998850-31999530	0	+	31998850	31998850	8553170	2	57,526,	0,154,
#Partially deleted in new
chr6	31999154	32002598	chr6:31999154-32002598	0	+	31999154	31999154	8553170	8	37,91,75,103,90,99,479,200,	0,151,332,1898,2166,2341,2622,3244,
#Partially deleted in new
chr6	31999199	32002497	chr6:31999199-32002497	0	+	31999199	31999199	8553170	8	197,75,103,90,99,84,133,99,	0,287,1853,2121,2296,2577,2923,3199,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	31999975	32003521	chr6:31999975-32003521	3	-	31999975	31999975	8553170	2	1593,502,	0,3044,
#Deleted in new
chr6	32000997	32002664	chr6:32000997-32002664	0	+	32000997	32000997	8553170	6	158,90,99,84,133,266,	0,323,498,779,1125,1401,
#Deleted in new
chr6	32001126	32002255	chr6:32001126-32002255	0	+	32001126	32001126	8553170	2	29,935,	0,194,
#Deleted in new
chr6	32001206	32001594	chr6:32001206-32001594	0	+	32001206	32001206	8553170	2	204,99,	0,289,
#Deleted in new
chr6	32001259	32001868	chr6:32001259-32001868	0	+	32001259	32001259	8553170	2	151,373,	0,236,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	32005635	32008451	chr6:32005635-32008451	7	+	32005635	32005635	16724991	8	877,102,102,87,202,179,104,318,	0,984,1174,1377,1633,2035,2297,2498,
#Partially deleted in new
chr6	32005688	32008399	chr6:32005688-32008399	5	+	32005688	32005688	16724991	10	202,90,147,102,102,87,202,179,104,266,	0,299,677,931,1121,1324,1580,1982,2244,2445,
#Deleted in new
chr6	32008613	32012472	chr6:32008613-32012472	7	-	32008613	32008613	16724991	13	102,164,162,97,152,133,131,144,120,53,123,336,321,	0,422,663,917,1107,1351,1603,1827,2089,2372,2539,2913,3538,
#Deleted in new
chr6	32013269	32013787	chr6:32013269-32013787	7	+	32013269	32013269	16724991	3	17,148,46,	0,122,472,
#Partially deleted in new
chr6	32014794	32035418	chr6:32014794-32035418	3	+	32014845	32035277	0	41	116,199,202,71,89,83,97,106,133,116,180,183,186,159,127,75,198,112,71,140,210,52,90,210,76,157,117,172,233,168,60,94,187,91,75,103,90,99,84,133,283,	0,248,661,1072,1221,1528,1781,2016,2219,9135,9350,9675,9990,10329,10739,11033,11368,11657,11859,12188,12441,12895,13048,13273,13662,13898,14150,14372,14771,15086,15647,16756,16947,17248,17429,18995,19263,19438,19719,20065,20341,
#Partially deleted in new
chr6	32014845	32035417	chr6:32014845-32035417	1	+	32014845	32035277	789624	40	65,199,202,71,89,83,97,106,133,116,180,183,186,159,127,75,198,112,71,140,210,52,90,210,76,157,117,172,233,168,60,94,140,75,103,90,99,84,133,282,	0,197,610,1021,1170,1477,1730,1965,2168,9084,9299,9624,9939,10278,10688,10982,11317,11606,11808,12137,12390,12844,12997,13222,13611,13847,14099,14321,14720,15035,15596,16705,16896,17378,18944,19212,19387,19668,20014,20290,
#Deleted in new
chr6	32015580	32016297	chr6:32015580-32016297	0	+	32015580	32015580	8553170	2	77,431,	0,286,
#Deleted in new
chr6	32015618	32017136	chr6:32015618-32017136	0	+	32015618	32015618	8553170	5	39,71,89,83,123,	0,248,397,704,1395,
#Partially deleted in new
chr6	32024277	32035380	chr6:32024277-32035380	0	+	32024277	32035277	8553170	31	47,183,186,159,127,75,198,112,71,140,210,52,90,210,76,157,117,172,233,168,60,94,187,91,24,103,90,99,84,133,245,	0,192,507,846,1256,1550,1885,2174,2376,2705,2958,3412,3565,3790,4179,4415,4667,4889,5288,5603,6164,7273,7464,7765,7946,9512,9780,9955,10236,10582,10858,
#Partially deleted in new
chr6	32024826	32035398	chr6:32024826-32035398	0	+	32024826	32024826	8553170	27	144,159,127,75,198,112,71,140,210,52,90,465,157,117,172,233,168,60,94,187,91,75,90,99,84,133,263,	0,297,707,1001,1336,1625,1827,2156,2409,2863,3016,3241,3866,4118,4340,4739,5054,5615,6724,6915,7216,7397,9231,9406,9687,10033,10309,
#Deleted in new
chr6	32024914	32026714	chr6:32024914-32026714	0	+	32024914	32024914	8553170	6	56,159,127,75,198,263,	0,209,619,913,1248,1537,
#Deleted in new
chr6	32027145	32028090	chr6:32027145-32028090	0	+	32027145	32027145	8553170	4	300,52,90,23,	0,544,697,922,
#Deleted in new
chr6	32027319	32028365	chr6:32027319-32028365	0	+	32027319	32027319	8553170	4	126,52,90,298,	0,370,523,748,
#Deleted in new
chr6	32029668	32032103	chr6:32029668-32032103	0	+	32029668	32031844	8553170	6	130,168,60,94,110,61,	0,212,773,1882,2150,2374,
#Deleted in new
chr6	32030394	32032298	chr6:32030394-32032298	0	+	32030394	32030394	8553170	5	107,94,187,91,75,	0,1156,1347,1648,1829,
#Deleted in new
chr6	32030478	32032456	chr6:32030478-32032456	0	+	32030478	32030478	8553170	5	23,94,187,91,233,	0,1072,1263,1564,1745,
#Deleted in new
chr6	32031587	32032267	chr6:32031587-32032267	0	+	32031587	32031587	8553170	2	57,526,	0,154,
#Partially deleted in new
chr6	32031891	32035403	chr6:32031891-32035403	0	+	32031891	32031891	8553170	8	37,91,75,103,90,99,479,268,	0,151,332,1898,2166,2341,2622,3244,
#Partially deleted in new
chr6	32031936	32035234	chr6:32031936-32035234	0	+	32031936	32031936	8553170	8	197,75,103,90,99,84,133,99,	0,287,1853,2121,2296,2577,2923,3199,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	32032712	32036258	chr6:32032712-32036258	3	-	32032712	32032712	8553170	2	1593,502,	0,3044,
#Deleted in new
chr6	32033734	32035401	chr6:32033734-32035401	0	+	32033734	32033734	8553170	6	158,90,99,84,133,266,	0,323,498,779,1125,1401,
#Deleted in new
chr6	32033863	32035002	chr6:32033863-32035002	0	+	32033863	32033863	8553170	2	29,945,	0,194,
#Deleted in new
chr6	32033943	32034331	chr6:32033943-32034331	0	+	32033943	32033943	8553170	2	204,99,	0,289,
#Deleted in new
chr6	32033996	32034605	chr6:32033996-32034605	0	+	32033996	32033996	8553170	2	151,373,	0,236,
#Deleted in new
chr6	32038264	32041670	chr6:32038264-32041670	3	+	32038422	32041134	789624	10	360,90,155,102,102,87,201,179,104,802,	0,457,829,1091,1281,1484,1740,2141,2403,2604,
#Deleted in new
chr6	32038315	32041670	chr6:32038315-32041670	1	+	32038422	32041134	789624	10	309,90,155,102,102,87,201,179,104,802,	0,406,778,1040,1230,1433,1689,2090,2352,2553,
#Deleted in new
chr6	32038326	32039824	chr6:32038326-32039824	0	+	32038422	32039109	789624	6	298,90,174,102,102,76,	0,395,748,1029,1219,1422,
#Deleted in new
chr6	32038339	32041642	chr6:32038339-32041642	0	+	32038339	32038339	8553170	8	472,155,102,102,87,179,104,774,	0,754,1016,1206,1409,2066,2328,2529,
#Deleted in new
chr6	32038364	32041642	chr6:32038364-32041642	0	+	32038364	32038364	8553170	9	260,90,155,102,102,87,201,366,774,	0,357,729,991,1181,1384,1640,2041,2504,
#Deleted in new
chr6	32038364	32041642	chr6:32038364-32041642	0	+	32038364	32038364	8553170	9	447,155,102,63,87,201,179,104,774,	0,729,991,1220,1384,1640,2041,2303,2504,
#Deleted in new
chr6	32038369	32039115	chr6:32038369-32039115	0	+	32038369	32038369	8553170	2	255,394,	0,352,
#Deleted in new
chr6	32038369	32041186	chr6:32038369-32041186	0	+	32038369	32038369	8553170	9	442,174,102,102,87,201,179,104,318,	0,705,986,1176,1379,1635,2036,2298,2499,
#Deleted in new
chr6	32038381	32039433	chr6:32038381-32039433	0	+	32038422	32039433	789624	4	243,90,188,78,	0,340,679,974,
#Deleted in new
chr6	32038414	32041642	chr6:32038414-32041642	1	+	32038422	32041134	0	9	210,155,102,102,87,201,179,104,774,	0,679,941,1131,1334,1590,1991,2253,2454,
#Deleted in new
chr6	32038414	32039606	chr6:32038414-32039606	0	+	32038422	32039606	789624	5	210,90,155,102,22,	0,307,679,941,1170,
#Deleted in new
chr6	32038414	32039484	chr6:32038414-32039484	0	+	32038414	32038414	8553170	4	210,90,155,129,	0,307,679,941,
#Deleted in new
chr6	32038414	32041642	chr6:32038414-32041642	1	+	32038422	32041134	789624	10	210,90,155,102,102,87,201,179,104,774,	0,307,679,941,1131,1334,1590,1991,2253,2454,
#Deleted in new
chr6	32038415	32039640	chr6:32038415-32039640	0	+	32038422	32039109	789624	4	209,174,102,95,	0,659,940,1130,
#Deleted in new
chr6	32038582	32039756	chr6:32038582-32039756	0	+	32038582	32038582	8553170	5	229,139,102,102,8,	0,527,773,963,1166,
#Deleted in new
chr6	32038750	32039823	chr6:32038750-32039823	0	+	32038750	32038750	8553170	4	498,102,102,75,	0,605,795,998,
#Deleted in new
chr6	32039213	32039972	chr6:32039213-32039972	0	+	32039213	32039213	8553170	3	35,102,427,	0,142,332,
#Partially deleted in new
chr6	32041152	32109338	chr6:32041152-32109338	1	-	32041348	32098198	789624	44	298,164,162,97,152,133,131,144,120,144,123,336,321,282,279,288,318,324,324,324,324,318,333,324,327,297,324,318,315,309,288,309,306,333,306,291,297,369,264,157,116,1839,411,158,	0,618,859,1113,1302,1546,1798,2022,2284,2596,2854,3228,3853,5022,6581,7210,8117,8845,11517,12235,14698,15433,16905,20244,21004,23668,26508,27237,27669,28400,28974,30837,32494,37880,40215,40883,43260,44597,47632,48070,53923,54458,56643,68028,
#Partially deleted in new
chr6	32041153	32109374	chr6:32041153-32109374	1	-	32041348	32098198	789624	44	297,164,162,97,152,133,131,144,120,144,123,336,321,282,279,288,318,324,324,324,324,318,333,324,327,297,324,318,315,309,288,309,306,333,306,291,297,369,264,157,116,1839,411,194,	0,617,858,1112,1301,1545,1797,2021,2283,2595,2853,3227,3852,5021,6580,7209,8116,8844,11516,12234,14697,15432,16904,20243,21003,23667,26507,27236,27668,28399,28973,30836,32493,37879,40214,40882,43259,44596,47631,48069,53922,54457,56642,68027,
#Partially deleted in new
chr6	32041153	32109332	chr6:32041153-32109332	3	-	32041348	32098198	8553170	45	297,164,162,97,152,133,131,144,120,144,123,336,321,282,279,288,318,324,324,324,324,318,333,324,327,297,324,318,315,309,288,309,306,333,306,291,297,369,741,264,157,116,1839,411,152,	0,617,858,1112,1301,1545,1797,2021,2283,2595,2853,3227,3852,5021,6580,7209,8116,8844,11516,12234,14697,15432,16904,20243,21003,23667,26507,27236,27668,28399,28973,30836,32493,37879,40214,40882,43259,44596,46097,47631,48069,53922,54457,56642,68027,
#Deleted in new
chr6	32041154	32046128	chr6:32041154-32046128	1	-	32041348	32045219	789624	13	296,164,162,97,152,133,131,144,120,144,123,336,1123,	0,616,857,1111,1300,1544,1796,2020,2282,2594,2852,3226,3851,
#Deleted in new
chr6	32041154	32046607	chr6:32041154-32046607	0	-	32041154	32041154	8553170	14	296,164,162,97,152,133,131,144,120,144,123,336,321,433,	0,616,857,1111,1300,1544,1796,2020,2282,2594,2852,3226,3851,5020,
#Partially deleted in new
chr6	32041154	32062484	chr6:32041154-32062484	1	-	32041348	32062484	789624	25	296,164,162,97,152,133,131,144,120,144,123,336,321,282,279,288,318,324,324,318,324,318,333,324,328,	0,616,857,1111,1300,1544,1796,2020,2282,2594,2852,3226,3851,5020,6579,7208,8115,8843,11515,12233,14696,15431,16903,20242,21002,
#Deleted in new
chr6	32042265	32043452	chr6:32042265-32043452	0	-	32042265	32042265	8553170	5	97,152,383,144,16,	0,189,433,909,1171,
#Partially deleted in new
chr6	32065080	32098198	chr6:32065080-32098198	1	-	32079033	32098198	789624	19	37,324,318,315,309,288,309,306,333,306,291,297,318,252,204,264,129,1839,403,	0,2580,3309,3741,4472,5046,6909,8566,13952,16287,16955,19332,20669,22170,22590,23704,24142,30530,32715,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	32078507	32078628	chr6:32078507-32078628	7	-	32078507	32078507	16724991	1	121,	0,
#Partially deleted in new
chr6	32093213	32109313	chr6:32093213-32109313	1	-	32093285	32098198	789624	5	243,116,1839,411,133,	0,1862,2397,4582,15967,
#Partially deleted in new
chr6	32095578	32109221	chr6:32095578-32109221	0	-	32095578	32095578	8553170	2	2628,41,	0,13602,
#Partially deleted in new
chr6	32098175	32115334	chr6:32098175-32115334	0	-	32098175	32098198	789624	2	31,341,	0,16818,
#Partially deleted in new
chr6	32098175	32117610	chr6:32098175-32117610	3	-	32098175	32098175	8553170	5	31,112,71,82,24,	0,18528,18861,19147,19411,
#Partially deleted in new
chr6	32115263	32128253	chr6:32115263-32128253	1	-	32115738	32128207	789624	18	705,85,112,71,82,108,180,92,186,134,132,136,86,136,92,79,80,128,	0,1216,1440,1773,2059,2323,2595,3511,3692,4560,5507,5725,5999,10853,11839,12178,12407,12862,
#Partially deleted in new
chr6	32115263	32128240	chr6:32115263-32128240	3	-	32115738	32128207	789624	18	705,85,112,71,82,108,180,92,186,134,132,136,86,136,92,79,80,124,	0,1216,1440,1773,2059,2323,2595,3511,3692,4560,5507,5725,5999,10853,11839,12178,12407,12853,
#Partially deleted in new
chr6	32115351	32128217	chr6:32115351-32128217	1	-	32116500	32128207	789624	18	617,85,112,94,82,108,180,92,186,134,132,136,86,136,92,79,80,101,	0,1128,1352,1685,1971,2235,2507,3423,3604,4472,5419,5637,5911,10765,11751,12090,12319,12765,
#Partially deleted in new
chr6	32118776	32120019	chr6:32118776-32120019	0	-	32118776	32118776	8553170	2	365,196,	0,1047,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	32118830	32120420	chr6:32118830-32120420	0	-	32118830	32118830	8553170	3	36,186,597,	0,125,993,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	32120441	32128222	chr6:32120441-32128222	0	-	32120441	32120441	8553170	8	461,136,86,136,92,79,80,106,	0,547,821,5675,6661,7000,7229,7675,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	32120508	32127767	chr6:32120508-32127767	0	-	32120508	32120508	8553170	7	394,136,86,136,92,79,97,	0,480,754,5608,6594,6933,7162,
#Partially deleted in new
chr6	32126041	32128218	chr6:32126041-32128218	0	-	32126041	32126041	8553170	5	211,92,79,80,102,	0,1061,1400,1629,2075,
#Deleted in new
chr6	32128706	32130291	chr6:32128706-32130291	3	-	32128730	32129780	789624	2	1148,197,	0,1388,
#Deleted in new
chr6	32148358	32151952	chr6:32148358-32151952	3	-	32149221	32151827	789624	4	1040,186,539,144,	0,1178,2009,3450,
#Deleted in new
chr6	32148358	32153083	chr6:32148358-32153083	1	-	32149221	32152102	789624	6	1040,186,216,91,81,112,	0,1178,2009,3450,3736,4613,
#Deleted in new
chr6	32148358	32149857	chr6:32148358-32149857	0	-	32148358	32148358	8553170	2	1040,321,	0,1178,
#Deleted in new
chr6	32148358	32151937	chr6:32148358-32151937	0	-	32148358	32148358	8553170	3	1040,186,129,	0,1178,3450,
#Deleted in new
chr6	32148358	32151923	chr6:32148358-32151923	0	-	32148358	32148358	8553170	3	1040,186,1556,	0,1178,2009,
#Deleted in new
chr6	32150494	32154373	chr6:32150494-32154373	3	-	32150494	32152102	789624	5	89,91,81,100,136,	0,1314,1600,3242,3743,
#Deleted in new
chr6	32151980	32153960	chr6:32151980-32153960	0	-	32151980	32151980	8553170	3	195,201,224,	0,991,1756,
#Deleted in new
chr6	32152801	32154333	chr6:32152801-32154333	3	-	32152801	32152801	789624	3	371,100,96,	0,935,1436,
#Deleted in new
chr6	32152801	32153908	chr6:32152801-32153908	0	-	32152801	32152801	8553170	2	371,172,	0,935,
#Deleted in new
chr6	32152801	32154365	chr6:32152801-32154365	0	-	32152801	32152801	789624	3	371,100,77,	0,935,1487,
#Deleted in new
chr6	32153339	32154339	chr6:32153339-32154339	0	-	32153339	32153339	789624	3	320,71,102,	0,426,898,
#Deleted in new
chr6	32153384	32154326	chr6:32153384-32154326	0	-	32153384	32153384	789624	3	275,71,158,	0,381,784,
#Deleted in new
chr6	32153440	32155978	chr6:32153440-32155978	0	+	32154594	32155978	789624	6	196,209,191,154,96,108,	0,755,1146,1589,2247,2430,
#Partially deleted in new
chr6	32153522	32163678	chr6:32153522-32163678	3	+	32153626	32162950	0	9	114,191,154,96,108,84,85,55,872,	0,1064,1507,2165,2348,4114,4317,9045,9284,
#Partially deleted in new
chr6	32153541	32157849	chr6:32153541-32157849	0	+	32153541	32153541	8553170	6	95,191,96,108,84,10,	0,1045,2146,2329,4095,4298,
#Partially deleted in new
chr6	32153576	32163678	chr6:32153576-32163678	1	+	32154594	32162950	0	10	60,406,191,154,96,108,84,85,55,872,	0,422,1010,1453,2111,2294,4060,4263,8991,9230,
#Partially deleted in new
chr6	32153844	32168281	chr6:32153844-32168281	0	+	32154594	32166199	789624	16	560,191,154,96,108,84,85,55,79,483,110,96,171,80,154,372,	0,742,1185,1843,2026,3792,3995,8723,10734,12293,12856,13065,13242,13505,13658,14065,
#Partially deleted in new
chr6	32153998	32163680	chr6:32153998-32163680	1	+	32154594	32162950	0	9	406,191,154,96,108,84,85,55,874,	0,588,1031,1689,1872,3638,3841,8569,8808,
#Partially deleted in new
chr6	32154069	32166234	chr6:32154069-32166234	0	+	32154594	32155885	789624	8	335,191,96,108,84,85,55,97,	0,517,1618,1801,3567,3770,8498,12068,
#Partially deleted in new
chr6	32154094	32163678	chr6:32154094-32163678	1	+	32154594	32162950	0	9	300,191,154,96,108,84,85,55,872,	0,492,935,1593,1776,3542,3745,8473,8712,
#Partially deleted in new
chr6	32154137	32163678	chr6:32154137-32163678	1	+	32154594	32162950	0	9	109,191,154,96,108,84,85,55,872,	0,449,892,1550,1733,3499,3702,8430,8669,
#Partially deleted in new
chr6	32154166	32157924	chr6:32154166-32157924	0	+	32154594	32157924	789624	6	238,191,16,108,84,85,	0,420,1601,1704,3470,3673,
#Partially deleted in new
chr6	32154196	32162596	chr6:32154196-32162596	0	+	32154196	32154196	8553170	7	208,191,154,16,108,84,29,	0,390,833,1571,1674,3440,8371,
#Partially deleted in new
chr6	32154221	32171978	chr6:32154221-32171978	3	+	32154594	32166199	8553170	21	183,191,154,96,108,84,85,55,79,95,123,110,96,155,80,154,627,209,98,1143,256,	0,365,808,1466,1649,3415,3618,8346,10357,11916,12276,12479,12688,12881,13128,13281,13688,15071,15686,16193,17501,
#Partially deleted in new
chr6	32154452	32157859	chr6:32154452-32157859	0	+	32154594	32155885	789624	5	325,96,108,84,20,	0,1235,1418,3184,3387,
#Partially deleted in new
chr6	32154463	32166489	chr6:32154463-32166489	0	+	32154463	32154463	8553170	9	314,154,96,108,84,85,55,79,352,	0,566,1224,1407,3173,3376,8104,10115,11674,
#Partially deleted in new
chr6	32154586	32167239	chr6:32154586-32167239	0	+	32154594	32155885	789624	11	191,96,108,84,85,55,79,483,110,96,153,	0,1101,1284,3050,3253,7981,9992,11551,12114,12323,12500,
#Deleted in new
chr6	32155017	32155759	chr6:32155017-32155759	0	+	32155017	32155017	8553170	2	166,72,	0,670,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	32157110	32166252	chr6:32157110-32166252	0	+	32157110	32157110	8553170	5	610,85,55,79,115,	0,729,5457,7468,9027,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	32157489	32158322	chr6:32157489-32158322	0	+	32157489	32157489	8553170	2	231,483,	0,350,
#Partially deleted in new
chr6	32157636	32166988	chr6:32157636-32166988	0	+	32157636	32166199	789624	7	84,85,55,103,483,110,79,	0,203,4931,6942,8501,9064,9273,
#Partially deleted in new
chr6	32164582	32168281	chr6:32164582-32168281	3	+	32166165	32167956	789624	9	75,129,123,110,96,171,80,154,372,	0,1555,1915,2118,2327,2504,2767,2920,3327,
#Partially deleted in new
chr6	32164604	32168281	chr6:32164604-32168281	1	+	32166165	32167956	789624	9	77,129,123,110,96,171,80,154,372,	0,1533,1893,2096,2305,2482,2745,2898,3305,
#Partially deleted in new
chr6	32164659	32167656	chr6:32164659-32167656	0	+	32166165	32167656	789624	8	22,129,123,110,96,111,80,154,	0,1478,1838,2041,2250,2487,2690,2843,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	32165235	32168281	chr6:32165235-32168281	0	+	32165235	32165235	8553170	6	1385,110,96,171,307,372,	0,1465,1674,1851,2114,2674,
#Deleted in new
chr6	32166192	32167169	chr6:32166192-32167169	0	+	32166192	32166192	8553170	4	40,123,110,260,	0,305,508,717,
#Deleted in new
chr6	32167542	32168281	chr6:32167542-32168281	0	+	32167542	32167542	8553170	2	83,372,	0,367,
#Partially deleted in new
chr6	32168211	32178096	chr6:32168211-32178096	3	-	32169275	32171496	789624	7	1237,73,96,176,134,209,96,	0,1754,1953,2213,2725,3085,9789,
#Partially deleted in new
chr6	32168211	32177325	chr6:32168211-32177325	1	-	32169275	32171496	789624	7	1237,73,96,176,134,209,92,	0,1754,1953,2213,2725,3085,9022,
#Partially deleted in new
chr6	32168211	32176122	chr6:32168211-32176122	1	-	32169275	32171496	789624	7	1237,73,96,176,134,209,309,	0,1754,1953,2213,2725,3085,7602,
#Partially deleted in new
chr6	32168211	32173115	chr6:32168211-32173115	1	-	32169275	32171496	789624	7	1237,73,96,176,134,209,178,	0,1754,1953,2213,2725,3085,4726,
#Partially deleted in new
chr6	32168211	32177786	chr6:32168211-32177786	1	-	32169275	32171496	789624	7	1237,73,96,176,134,209,243,	0,1754,1953,2213,2725,3085,9332,
#Partially deleted in new
chr6	32168211	32177080	chr6:32168211-32177080	1	-	32169275	32171496	789624	7	1237,73,96,176,134,209,571,	0,1754,1953,2213,2725,3085,8298,
#Partially deleted in new
chr6	32168211	32177342	chr6:32168211-32177342	0	-	32168211	32168211	8553170	5	1237,73,96,209,833,	0,1754,1953,3085,8298,
#Deleted in new
chr6	32170029	32170116	chr6:32170029-32170116	3	-	32170029	32170029	5263520	1	87,	0,
#Partially deleted in new
chr6	32170164	32175897	chr6:32170164-32175897	0	-	32170164	32170164	8553170	5	96,176,134,256,84,	0,260,772,1085,5649,
#Deleted in new
chr6	32178353	32180793	chr6:32178353-32180793	3	+	32178511	32180326	789624	6	298,19,113,55,118,565,	0,1187,1297,1523,1655,1875,
#Deleted in new
chr6	32178436	32179773	chr6:32178436-32179773	0	+	32178436	32178436	8553170	3	215,19,123,	0,1104,1214,
#Deleted in new
chr6	32179815	32179876	chr6:32179815-32179876	3	+	32179815	32179815	5263520	1	61,	0,
#Partially deleted in new
chr6	32180967	32184246	chr6:32180967-32184246	1	-	32181552	32184222	0	10	272,109,142,131,183,88,65,196,107,76,	0,556,1279,1600,1873,2146,2356,2587,2913,3203,
#Partially deleted in new
chr6	32180967	32184237	chr6:32180967-32184237	1	-	32181173	32184222	0	10	272,127,27,160,183,88,65,154,107,67,	0,383,638,1571,1873,2146,2356,2587,2913,3203,
#Partially deleted in new
chr6	32180967	32184322	chr6:32180967-32184322	1	-	32181142	32184222	0	11	272,127,27,142,131,183,88,113,196,107,152,	0,383,638,1279,1600,1873,2146,2308,2587,2913,3203,
#Partially deleted in new
chr6	32180967	32184322	chr6:32180967-32184322	1	-	32181142	32183606	789624	10	272,127,142,131,183,88,65,196,107,152,	0,383,1279,1600,1873,2146,2356,2587,2913,3203,
#Partially deleted in new
chr6	32180967	32184324	chr6:32180967-32184324	3	-	32181142	32184222	0	11	272,127,27,142,131,183,88,65,196,107,154,	0,383,638,1279,1600,1873,2146,2356,2587,2913,3203,
#Partially deleted in new
chr6	32180967	32184322	chr6:32180967-32184322	1	-	32181552	32184222	0	10	272,109,142,131,183,88,113,196,107,152,	0,556,1279,1600,1873,2146,2308,2587,2913,3203,
#Deleted in new
chr6	32180967	32181635	chr6:32180967-32181635	0	-	32180967	32180967	8553170	2	272,285,	0,383,
#Partially deleted in new
chr6	32180967	32182931	chr6:32180967-32182931	0	-	32180967	32180967	8553170	5	272,127,27,142,364,	0,383,638,1279,1600,
#Partially deleted in new
chr6	32180967	32184246	chr6:32180967-32184246	0	-	32180967	32180967	789624	10	272,127,27,142,131,183,88,65,196,366,	0,383,638,1279,1600,1873,2146,2356,2587,2913,
#Partially deleted in new
chr6	32180967	32182931	chr6:32180967-32182931	0	-	32180967	32180967	8553170	4	272,109,142,364,	0,556,1279,1600,
#Partially deleted in new
chr6	32180967	32184322	chr6:32180967-32184322	1	-	32181142	32184222	789624	5	272,83,123,107,152,	0,383,2660,2913,3203,
#Partially deleted in new
chr6	32181142	32184222	chr6:32181142-32184222	1	-	32181142	32182576	789624	8	97,127,27,142,131,59,30,52,	0,208,463,1104,1425,1698,2815,3028,
#Deleted in new
chr6	32182867	32184235	chr6:32182867-32184235	0	-	32182867	32184222	789624	6	156,88,117,183,107,65,	0,246,456,700,1013,1303,
#Deleted in new
chr6	32182879	32184237	chr6:32182879-32184237	0	-	32182879	32184222	789624	6	144,88,113,196,107,67,	0,234,396,675,1001,1291,
#Deleted in new
chr6	32183408	32184322	chr6:32183408-32184322	1	-	32183408	32184222	789624	4	32,196,107,152,	0,146,472,762,
#Deleted in new
chr6	32184732	32185882	chr6:32184732-32185882	3	-	32184732	32184732	8553170	2	103,559,	0,591,
#Partially deleted in new
chr6	32184740	32190186	chr6:32184740-32190186	3	-	32186381	32189915	789624	9	1734,87,89,154,136,191,248,74,492,	0,1863,2072,2501,2906,3225,3516,3982,4954,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	32186255	32187515	chr6:32186255-32187515	0	-	32186255	32186255	8553170	2	646,274,	0,986,
#Partially deleted in new
chr6	32186972	32189942	chr6:32186972-32189942	0	-	32186972	32186972	8553170	6	423,136,191,248,74,248,	0,674,993,1284,1750,2722,
#Partially deleted in new
chr6	32187232	32188816	chr6:32187232-32188816	0	-	32187232	32187232	8553170	4	163,136,191,560,	0,414,733,1024,
#Deleted in new
chr6	32188279	32189077	chr6:32188279-32189077	0	-	32188279	32188279	8553170	2	225,355,	0,443,
#Deleted in new
chr6	32190765	32192906	chr6:32190765-32192906	1	-	32191365	32192513	789624	4	738,200,103,435,	0,943,1382,1706,
#Deleted in new
chr6	32190765	32192885	chr6:32190765-32192885	0	-	32191865	32192513	789624	4	738,162,103,414,	0,943,1382,1706,
#Deleted in new
chr6	32190765	32192868	chr6:32190765-32192868	1	-	32191365	32192482	789624	4	738,200,125,397,	0,943,1382,1706,
#Deleted in new
chr6	32190766	32193118	chr6:32190766-32193118	1	-	32191773	32193118	789624	5	737,200,103,59,78,	0,942,1381,1705,2274,
#Partially deleted in new
chr6	32194842	32224067	chr6:32194842-32224067	3	-	32195436	32223928	789624	30	1308,98,148,296,139,82,220,176,384,524,113,253,185,154,88,118,153,146,160,123,114,114,195,156,237,123,348,296,82,212,	0,1481,2082,2456,3578,3806,4083,5988,6274,7233,8927,9294,15909,17631,17981,18292,18845,19267,20383,22102,22310,23152,24749,25286,25562,25913,26135,27668,28162,29013,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	32194842	32204170	chr6:32194842-32204170	0	-	32194842	32194842	8553170	10	1308,98,148,296,139,82,220,176,2766,34,	0,1481,2082,2456,3578,3806,4083,5988,6274,9294,
#Deleted in new
chr6	32194842	32196977	chr6:32194842-32196977	0	-	32194842	32194842	8553170	2	1579,53,	0,2082,
#Partially deleted in new
chr6	32210925	32214237	chr6:32210925-32214237	0	-	32210925	32210925	8553170	5	11,154,118,153,128,	0,1548,2209,2762,3184,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	32215859	32224057	chr6:32215859-32224057	0	-	32215859	32215859	8553170	11	1208,114,114,195,156,237,123,348,296,82,202,	0,1293,2135,3732,4269,4545,4896,5118,6651,7145,7996,
#Partially deleted in new
chr6	32254639	32391802	chr6:32254639-32391802	2	+	32254639	32254639	8553170	4	51,60,153,1589,	0,111140,134629,135574,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	32254640	32265810	chr6:32254640-32265810	1	+	32254640	32254640	8553170	3	50,48,3199,	0,726,7971,
#Partially deleted in new
chr6	32255283	32350039	chr6:32255283-32350039	0	+	32255283	32255283	789624	2	131,528,	0,94228,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	32255327	32407763	chr6:32255327-32407763	0	+	32255327	32255327	8553170	5	87,540,124,104,1647,	0,134886,148341,150126,150789,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	32255327	32265727	chr6:32255327-32265727	0	+	32255327	32255327	8553170	2	87,3116,	0,7284,
#Partially deleted in new
chr6	32255337	32391931	chr6:32255337-32391931	1	+	32255337	32255337	8553170	3	77,486,1718,	0,94174,134876,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	32255351	32407674	chr6:32255351-32407674	0	+	32255351	32255351	8553170	3	63,60,1558,	0,110428,150765,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	32255710	32265838	chr6:32255710-32265838	0	+	32255710	32255710	8553170	2	231,3227,	0,6901,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	32255720	32390774	chr6:32255720-32390774	0	+	32255720	32255720	8553170	3	278,60,561,	0,110059,134493,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	32262701	32407763	chr6:32262701-32407763	1	+	32262701	32262701	8553170	6	108,60,540,124,104,1647,	0,103078,127512,140967,142752,143415,
#Partially deleted in new
chr6	32288525	32371899	chr6:32288525-32371899	1	-	32288621	32371706	789624	26	144,749,15,21,21,21,21,21,21,24,21,21,21,21,21,21,39,21,21,21,21,30,33,33,87,206,	0,4761,11396,12154,14083,27246,27868,33960,34591,35065,42063,43508,46911,47386,48089,50453,51074,54712,61214,66598,67123,77747,79399,80256,81371,83168,
#Partially deleted in new
chr6	32292697	32371907	chr6:32292697-32371907	1	-	32292980	32371706	789624	26	1338,15,21,21,21,21,21,24,24,21,21,21,21,21,21,39,21,21,21,21,21,30,33,33,87,214,	0,7224,7982,9911,23696,29788,30419,30893,31958,37891,39336,42739,43214,43917,46281,46902,50540,57042,62426,62951,73469,73575,75227,76084,77199,78996,
#Partially deleted in new
chr6	32292697	32371879	chr6:32292697-32371879	3	-	32292980	32371706	789624	23	1338,15,21,21,21,21,24,21,21,21,21,21,21,39,90,21,21,21,30,33,33,87,186,	0,7224,7982,9911,29788,30419,30893,37891,39336,42739,43214,43917,46281,46902,57042,62426,62951,73469,73575,75227,76084,77199,78996,
#Partially deleted in new
chr6	32292697	32371907	chr6:32292697-32371907	1	-	32292980	32371706	789624	26	1338,15,21,21,21,21,21,21,24,21,21,21,21,21,21,39,21,21,21,21,21,30,33,33,87,214,	0,7224,7982,9911,23074,23696,29788,30419,30893,37891,39336,42739,43214,43917,46281,46902,50540,57042,62426,62951,73469,73575,75227,76084,77199,78996,
#Partially deleted in new
chr6	32292699	32371912	chr6:32292699-32371912	1	-	32292980	32371706	789624	23	1336,15,21,21,21,21,24,21,21,21,21,21,21,39,90,21,21,21,30,33,33,87,219,	0,7222,7980,9909,23072,30417,30891,37889,39334,42737,43212,43915,46279,46900,57040,62424,62949,73467,73573,75225,76082,77197,78994,
#Partially deleted in new
chr6	32292714	32371879	chr6:32292714-32371879	1	-	32292980	32371706	789624	23	1321,15,21,21,21,21,24,21,21,21,21,21,21,39,90,21,16,16,34,33,33,87,186,	0,7207,7965,9894,29771,30402,30876,37874,39319,42722,43197,43900,46264,46885,57025,62409,62934,62952,73554,75210,76067,77182,78979,
#Partially deleted in new
chr6	32292714	32371872	chr6:32292714-32371872	1	-	32292980	32371706	789624	24	1321,15,21,21,21,21,21,24,21,21,21,21,21,21,39,21,21,21,21,30,33,33,87,179,	0,7207,7965,9894,23679,29771,30402,30876,37874,39319,42722,43197,43900,46264,46885,50523,57025,62409,62934,73558,75210,76067,77182,78979,
#Partially deleted in new
chr6	32292955	32371912	chr6:32292955-32371912	1	-	32292955	32371706	789624	33	69,636,69,296,15,21,21,21,21,21,18,5,24,11,6,21,21,23,21,21,39,21,21,21,17,5,21,9,17,33,33,87,219,	0,73,713,784,6966,7724,9653,23438,29530,30161,30637,30904,31700,37633,37648,39078,42481,42956,43659,46023,46644,50282,56784,62168,62693,63885,73211,73317,73330,74969,75826,76941,78738,
#Deleted in new
chr6	32325218	32326178	chr6:32325218-32326178	7	+	32325218	32325218	16724991	1	960,	0,
#Partially deleted in new
chr6	32335929	32371872	chr6:32335929-32371872	0	-	32335929	32371706	789624	14	3,21,21,39,21,21,21,21,30,33,33,33,87,179,	0,685,3049,3670,7308,13810,19194,19719,30343,30457,31995,32852,33967,35764,
#Partially deleted in new
chr6	32336629	32371879	chr6:32336629-32371879	0	-	32336629	32371706	789624	11	6,21,90,21,21,21,30,33,33,87,186,	0,6608,13110,18494,19019,29537,29643,31295,32152,33267,35064,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	32352876	32352983	chr6:32352876-32352983	3	+	32352876	32352876	8553170	1	107,	0,
#Partially deleted in new
chr6	32387177	32390775	chr6:32387177-32390775	0	+	32387177	32387177	8553170	2	547,562,	0,3036,
#Partially deleted in new
chr6	32390509	32393686	chr6:32390509-32393686	0	+	32390509	32390509	789624	3	244,128,238,	0,1103,2939,
#Partially deleted in new
chr6	32393962	32407128	chr6:32393962-32407128	3	-	32393968	32407123	789624	7	95,282,348,21,282,348,84,	0,781,2076,7822,8972,10976,13082,
#Partially deleted in new
chr6	32394735	32407123	chr6:32394735-32407123	1	-	32394735	32407123	789624	6	290,348,21,282,348,79,	0,1303,7049,8199,10203,12309,
#Partially deleted in new
chr6	32394735	32407123	chr6:32394735-32407123	0	-	32401789	32407123	789624	5	290,344,21,112,79,	0,1307,7049,10439,12309,
#Partially deleted in new
chr6	32394735	32407123	chr6:32394735-32407123	1	-	32394735	32396285	789624	5	290,348,21,107,79,	0,1303,7049,10444,12309,
#Deleted in new
chr6	32405036	32407128	chr6:32405036-32407128	0	-	32405036	32407123	789624	2	247,84,	0,2008,
#Partially deleted in new
chr6	32439841	32445046	chr6:32439841-32445046	3	+	32439950	32443910	0	5	191,246,282,166,395,	0,2606,3343,3914,4810,
#Partially deleted in new
chr6	32439877	32445046	chr6:32439877-32445046	1	+	32439950	32443910	789624	5	155,246,207,166,395,	0,2570,3382,3878,4774,
#Partially deleted in new
chr6	32459820	32473500	chr6:32459820-32473500	7	-	32459820	32459820	16724991	2	267,76,	0,13604,
#Partially deleted in new
chr6	32517342	32530287	chr6:32517342-32530287	3	-	32517738	32530224	0	6	410,24,111,282,270,163,	0,711,1213,2027,4562,12782,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	32549939	32550090	chr6:32549939-32550090	3	-	32549939	32549939	8553170	1	151,	0,
#Partially deleted in new
chr6	32553045	32558186	chr6:32553045-32558186	5	-	32553045	32553045	16724991	5	27,24,111,282,271,	0,330,810,1644,4870,
#Partially deleted in new
chr6	32578768	32589848	chr6:32578768-32589848	3	-	32579090	32589742	0	6	336,24,111,282,270,206,	0,1478,1977,2788,5340,10874,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	32628178	32637531	chr6:32628178-32637531	0	+	32637458	32637531	789624	4	92,151,166,111,	0,3763,4565,9242,
#Partially deleted in new
chr6	32637356	32643652	chr6:32637356-32643652	3	+	32637458	32642764	0	5	184,249,282,175,701,	0,3953,4615,5253,5595,
#Partially deleted in new
chr6	32637400	32643652	chr6:32637400-32643652	1	+	32637458	32642764	0	5	140,249,282,175,360,	0,3909,4571,5209,5892,
#Partially deleted in new
chr6	32637405	32642981	chr6:32637405-32642981	0	+	32637458	32642981	0	4	135,249,282,30,	0,3904,4566,5546,
#Partially deleted in new
chr6	32637419	32643017	chr6:32637419-32643017	1	+	32637458	32642764	0	4	121,249,282,408,	0,3890,4552,5190,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	32637426	32643272	chr6:32637426-32643272	0	+	32637458	32638991	789624	6	114,994,249,282,175,321,	0,1485,3883,4545,5183,5525,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	32637430	32647062	chr6:32637430-32647062	0	+	32637430	32637430	8553170	3	110,249,5091,	0,3879,4541,
#Deleted in new
chr6	32659466	32666684	chr6:32659466-32666684	1	-	32660235	32666607	789624	6	783,24,111,282,270,186,	0,1392,1880,2500,5331,7032,
#Deleted in new
chr6	32659466	32666664	chr6:32659466-32666664	1	-	32660235	32666607	789624	4	783,282,270,166,	0,2500,5331,7032,
#Deleted in new
chr6	32659466	32666652	chr6:32659466-32666652	1	-	32660235	32666607	789624	3	783,282,154,	0,2500,7032,
#Deleted in new
chr6	32659466	32668383	chr6:32659466-32668383	3	-	32660235	32666607	789624	6	783,111,282,270,172,116,	0,1880,2500,5331,7032,8801,
#Deleted in new
chr6	32659466	32666694	chr6:32659466-32666694	1	-	32660235	32666607	789624	5	783,111,282,270,196,	0,1880,2500,5331,7032,
#Deleted in new
chr6	32659466	32666638	chr6:32659466-32666638	0	-	32659466	32659466	8553170	3	783,3721,140,	0,1880,7032,
#Deleted in new
chr6	32659879	32660729	chr6:32659879-32660729	3	+	32659879	32659879	789624	2	177,375,	0,475,
#Deleted in new
chr6	32659885	32662450	chr6:32659885-32662450	0	-	32659885	32659885	8553170	2	212,97,	0,2468,
#Deleted in new
chr6	32659885	32660440	chr6:32659885-32660440	0	-	32659885	32659885	8553170	2	364,64,	0,491,
#Deleted in new
chr6	32660106	32666638	chr6:32660106-32666638	0	-	32662053	32666607	789624	5	143,111,119,270,140,	0,1240,1860,4691,6392,
#Deleted in new
chr6	32706123	32706955	chr6:32706123-32706955	7	-	32706123	32706123	16724991	1	832,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	32718004	32719170	chr6:32718004-32719170	3	+	32718004	32718004	8553170	2	143,581,	0,585,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	32718028	32718811	chr6:32718028-32718811	0	+	32718028	32718028	8553170	2	412,222,	0,561,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	32718028	32718832	chr6:32718028-32718832	0	+	32718028	32718028	8553170	3	119,35,243,	0,377,561,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	32718384	32718835	chr6:32718384-32718835	0	+	32718384	32718384	8553170	2	56,246,	0,205,
#Deleted in new
chr6	32730757	32731695	chr6:32730757-32731695	7	-	32730757	32730757	16724991	2	80,276,	0,662,
#Partially deleted in new
chr6	32741341	32747215	chr6:32741341-32747215	3	+	32741443	32746394	789624	5	184,249,282,175,634,	0,3817,4449,4898,5240,
#Partially deleted in new
chr6	32756097	32763490	chr6:32756097-32763490	3	-	32756452	32763470	789624	5	369,24,282,267,117,	0,1183,2752,5562,7276,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	32756097	32763532	chr6:32756097-32763532	1	-	32757233	32763470	789624	5	1207,111,282,267,159,	0,1675,2752,5562,7276,
#Partially deleted in new
chr6	32756097	32763534	chr6:32756097-32763534	1	-	32756452	32763470	789624	6	369,24,111,282,267,161,	0,1183,1675,2752,5562,7276,
#Partially deleted in new
chr6	32756387	32763466	chr6:32756387-32763466	0	-	32756452	32763466	789624	4	79,282,267,93,	0,2462,5272,6986,
#Partially deleted in new
chr6	32812762	32817048	chr6:32812762-32817048	1	-	32813215	32816951	0	6	489,32,111,282,270,188,	0,677,960,1557,2281,4098,
#Partially deleted in new
chr6	32812762	32816976	chr6:32812762-32816976	0	-	32815175	32816951	789624	6	489,32,111,282,158,116,	0,677,960,1557,2281,4098,
#Partially deleted in new
chr6	32812766	32820466	chr6:32812766-32820466	3	-	32813215	32816951	8553170	7	485,32,111,282,270,92,156,	0,673,956,1553,2277,4094,7544,
#Partially deleted in new
chr6	32813046	32816988	chr6:32813046-32816988	0	-	32813046	32813046	8553170	5	205,32,879,270,128,	0,393,676,1997,3814,
#Partially deleted in new
chr6	32813766	32838822	chr6:32813766-32838822	3	-	32813766	32838233	789624	15	67,282,158,92,137,160,174,189,129,198,206,131,115,497,170,	0,553,1277,3094,15633,16163,16500,16851,18566,18860,21387,21876,23770,23974,24886,
#Partially deleted in new
chr6	32814369	32816910	chr6:32814369-32816910	0	-	32814369	32816910	789624	3	223,270,50,	0,674,2491,
#Partially deleted in new
chr6	32821832	32838727	chr6:32821832-32838727	3	-	32822288	32838233	0	12	486,137,160,174,189,129,198,206,131,115,497,75,	0,7567,8097,8434,8785,10500,10794,13321,13810,15704,15908,16820,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	32825409	32838770	chr6:32825409-32838770	1	-	32828854	32838233	789624	13	3496,126,137,160,174,189,129,198,206,131,115,497,118,	0,3499,3990,4520,4857,5208,6923,7217,9744,10233,12127,12331,13243,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	32825414	32838780	chr6:32825414-32838780	1	-	32828905	32838233	0	12	3620,137,160,174,189,129,198,206,131,115,497,128,	0,3985,4515,4852,5203,6918,7212,9739,10228,12122,12326,13238,
#Deleted in new
chr6	32828943	32830727	chr6:32828943-32830727	0	-	32828943	32828943	8553170	4	91,137,160,461,	0,456,986,1323,
#Deleted in new
chr6	32832294	32832733	chr6:32832294-32832733	0	-	32832294	32832294	8553170	2	167,107,	0,332,
#Partially deleted in new
chr6	32840716	32844703	chr6:32840716-32844703	1	-	32840958	32844413	0	6	331,205,130,112,148,425,	0,814,1417,1955,2225,3562,
#Partially deleted in new
chr6	32840716	32844047	chr6:32840716-32844047	3	-	32840958	32843996	0	6	331,205,130,112,148,198,	0,814,1417,1955,2225,3133,
#Partially deleted in new
chr6	32840716	32844020	chr6:32840716-32844020	1	-	32840958	32843996	789624	6	331,205,130,40,148,171,	0,814,1417,1955,2225,3133,
#Partially deleted in new
chr6	32840716	32842034	chr6:32840716-32842034	0	-	32840716	32840716	8553170	2	331,504,	0,814,
#Partially deleted in new
chr6	32840737	32844557	chr6:32840737-32844557	0	-	32840737	32840737	8553170	5	310,205,130,112,1616,	0,793,1396,1934,2204,
#Partially deleted in new
chr6	32841020	32844651	chr6:32841020-32844651	0	-	32841020	32841020	8553170	5	27,205,130,418,373,	0,510,1113,1651,3258,
#Deleted in new
chr6	32844085	32846495	chr6:32844085-32846495	0	+	32844085	32844085	789624	2	189,1078,	0,1332,
#Deleted in new
chr6	32844107	32845819	chr6:32844107-32845819	1	+	32844107	32844107	8553170	3	167,301,490,	0,462,1222,
#Deleted in new
chr6	32844132	32845986	chr6:32844132-32845986	0	+	32844132	32844132	789624	3	142,226,569,	0,512,1285,
#Deleted in new
chr6	32844132	32846210	chr6:32844132-32846210	3	+	32844132	32844132	789624	3	142,61,793,	0,677,1285,
#Deleted in new
chr6	32844133	32845695	chr6:32844133-32845695	0	+	32844133	32844133	8553170	2	737,278,	0,1284,
#Partially deleted in new
chr6	32844135	32859585	chr6:32844135-32859585	1	+	32856146	32859532	789624	6	139,68,132,130,142,181,	0,12002,13127,13869,14228,15269,
#Deleted in new
chr6	32844137	32846078	chr6:32844137-32846078	0	+	32844137	32844137	8553170	2	137,749,	0,1192,
#Partially deleted in new
chr6	32844835	32858437	chr6:32844835-32858437	0	+	32856146	32858437	789624	5	35,68,132,130,74,	0,11302,12427,13169,13528,
#Partially deleted in new
chr6	32845208	32853978	chr6:32845208-32853978	3	-	32845578	32853816	0	11	577,137,163,174,189,129,198,206,131,115,940,	0,1859,2304,2710,3443,3781,5111,5735,6900,7179,7830,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	32845208	32850142	chr6:32845208-32850142	0	-	32845208	32845208	8553170	5	577,137,163,174,1491,	0,1859,2304,2710,3443,
#Partially deleted in new
chr6	32845231	32853816	chr6:32845231-32853816	1	-	32845578	32853816	789624	5	554,137,163,144,321,	0,1836,2281,2687,8264,
#Partially deleted in new
chr6	32845250	32852787	chr6:32845250-32852787	0	-	32845250	32845250	8553170	11	535,137,163,174,189,129,198,206,131,115,193,	0,1817,2262,2668,3401,3739,5069,5693,6858,7137,7344,
#Partially deleted in new
chr6	32845269	32853014	chr6:32845269-32853014	0	-	32845269	32845269	8553170	11	516,137,163,174,189,129,198,206,131,115,34,	0,1798,2243,2649,3382,3720,5050,5674,6839,7118,7711,
#Partially deleted in new
chr6	32845674	32848230	chr6:32845674-32848230	0	-	32845674	32845674	8553170	3	111,608,312,	0,1393,2244,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	32854147	32858900	chr6:32854147-32858900	0	+	32854147	32854147	8553170	3	142,1997,537,	0,1990,4216,
#Partially deleted in new
chr6	32854160	32859585	chr6:32854160-32859585	3	+	32854229	32859532	0	6	129,68,132,130,142,181,	0,1977,3102,3844,4203,5244,
#Partially deleted in new
chr6	32856096	32858722	chr6:32856096-32858722	0	+	32856096	32856096	8553170	4	109,132,130,359,	0,1166,1908,2267,
#Deleted in new
chr6	32879170	32879848	chr6:32879170-32879848	7	-	32879170	32879170	16724991	1	678,	0,
#Deleted in new
chr6	32879215	32879833	chr6:32879215-32879833	5	-	32879215	32879215	16724991	1	618,	0,
#Deleted in new
chr6	32896415	32896490	chr6:32896415-32896490	7	+	32896415	32896415	16724991	1	75,	0,
#Partially deleted in new
chr6	32934628	32938688	chr6:32934628-32938688	0	-	32934970	32938688	789624	4	359,117,285,5,	0,907,2543,4055,
#Partially deleted in new
chr6	32934628	32941070	chr6:32934628-32941070	3	-	32934970	32940807	0	6	359,36,117,285,282,318,	0,713,907,2543,4055,6124,
#Partially deleted in new
chr6	32934628	32937439	chr6:32934628-32937439	0	-	32934970	32937439	789624	3	359,36,268,	0,713,2543,
#Deleted in new
chr6	32934628	32936901	chr6:32934628-32936901	0	-	32934628	32934628	8553170	2	359,1560,	0,713,
#Deleted in new
chr6	32934628	32936886	chr6:32934628-32936886	0	-	32934628	32934628	8553170	3	359,36,1351,	0,713,907,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	32934628	32940984	chr6:32934628-32940984	0	-	32934628	32934628	8553170	2	4337,232,	0,6124,
#Partially deleted in new
chr6	32937363	32953122	chr6:32937363-32953122	3	-	32937363	32953036	789624	4	93,282,63,174,	0,1320,3389,15585,
#Partially deleted in new
chr6	32948612	32953122	chr6:32948612-32953122	3	-	32948863	32953036	0	5	256,129,279,285,174,	0,658,998,1906,4336,
#Partially deleted in new
chr6	32948612	32953108	chr6:32948612-32953108	1	-	32948863	32953036	789624	5	256,129,177,285,160,	0,658,998,1906,4336,
#Partially deleted in new
chr6	32948612	32953061	chr6:32948612-32953061	1	-	32948863	32953036	789624	4	256,129,279,113,	0,658,998,4336,
#Partially deleted in new
chr6	32948612	32953108	chr6:32948612-32953108	0	-	32948612	32948612	8553170	4	256,126,1193,160,	0,661,998,4336,
#Deleted in new
chr6	32948612	32949671	chr6:32948612-32949671	0	-	32948612	32948612	8553170	2	256,401,	0,658,
#Partially deleted in new
chr6	32948770	32968444	chr6:32948770-32968444	0	-	32948770	32948770	8553170	4	98,129,279,300,	0,500,840,19374,
#Partially deleted in new
chr6	32949270	32952461	chr6:32949270-32952461	0	-	32949270	32952461	789624	4	129,279,285,178,	0,340,1248,3013,
#Partially deleted in new
chr6	32949656	32969094	chr6:32949656-32969094	0	-	32949656	32950792	789624	3	233,285,93,	0,862,19345,
#Partially deleted in new
chr6	32950083	32953034	chr6:32950083-32953034	0	-	32950083	32950083	8553170	3	720,178,86,	0,2200,2865,
#Partially deleted in new
chr6	32968659	32981505	chr6:32968659-32981505	3	+	32972898	32980718	0	13	397,1333,304,138,139,215,375,129,249,263,305,123,924,	0,2935,5802,6724,7371,7590,7902,8782,9097,9466,11168,11682,11922,
#Deleted in new
chr6	32969164	32972141	chr6:32969164-32972141	1	+	32969245	32971976	789624	2	188,547,	0,2430,
#Deleted in new
chr6	32969318	32976618	chr6:32969318-32976618	0	+	32969318	32976618	789624	6	34,304,138,139,215,57,	0,5143,6065,6712,6931,7243,
#Deleted in new
chr6	32970231	32970886	chr6:32970231-32970886	3	+	32970231	32970231	8553170	2	202,136,	0,519,
#Deleted in new
chr6	32970237	32972116	chr6:32970237-32972116	0	+	32970237	32970237	8553170	2	196,522,	0,1357,
#Deleted in new
chr6	32970704	32972048	chr6:32970704-32972048	0	+	32970704	32970704	8553170	2	93,454,	0,890,
#Partially deleted in new
chr6	32970887	32981505	chr6:32970887-32981505	1	+	32972898	32980718	0	13	310,1333,304,138,139,215,375,129,249,263,305,123,924,	0,707,3574,4496,5143,5362,5674,6554,6869,7238,8940,9454,9694,
#Deleted in new
chr6	32970901	32972051	chr6:32970901-32972051	0	+	32970901	32970901	8553170	2	93,457,	0,693,
#Deleted in new
chr6	32970929	32978197	chr6:32970929-32978197	0	+	32972898	32977265	789624	10	268,1333,304,138,139,215,375,311,249,72,	0,665,3532,4454,5101,5320,5632,6330,6827,7196,
#Partially deleted in new
chr6	32970952	32981505	chr6:32970952-32981505	0	+	32972898	32975402	789624	14	245,1333,304,92,138,139,215,375,129,249,263,305,123,924,	0,642,3509,4068,4431,5078,5297,5609,6489,6804,7173,8875,9389,9629,
#Deleted in new
chr6	32972064	32972853	chr6:32972064-32972853	3	-	32972064	32972064	8553170	2	267,310,	0,479,
#Deleted in new
chr6	32972216	32978203	chr6:32972216-32978203	0	+	32972898	32978203	789624	9	711,304,138,139,215,375,129,249,78,	0,2245,3167,3814,4033,4345,5225,5540,5909,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	32972729	32981505	chr6:32972729-32981505	1	+	32972898	32980718	0	13	198,304,138,139,215,375,129,249,263,105,305,123,924,	0,1732,2654,3301,3520,3832,4712,5027,5396,6360,7098,7612,7852,
#Partially deleted in new
chr6	32973083	32981505	chr6:32973083-32981505	0	+	32973083	32980718	789624	12	46,304,138,139,215,375,129,249,263,305,123,924,	0,1378,2300,2947,3166,3478,4358,4673,5042,6744,7258,7498,
#Partially deleted in new
chr6	32973083	32981505	chr6:32973083-32981505	1	+	32974573	32980718	0	12	46,304,138,139,215,375,129,249,263,305,123,924,	0,1378,2300,2947,3166,3478,4358,4673,5042,6744,7258,7498,
#Deleted in new
chr6	32976141	32978214	chr6:32976141-32978214	0	+	32976141	32976141	8553170	5	28,215,1009,249,89,	0,108,420,1615,1984,
#Deleted in new
chr6	32976412	32977074	chr6:32976412-32977074	0	+	32976412	32976987	789624	2	52,513,	0,149,
#Deleted in new
chr6	32976568	32977901	chr6:32976568-32977901	0	+	32976568	32977461	789624	3	368,154,145,	0,848,1188,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	32977549	32978801	chr6:32977549-32978801	0	+	32977549	32977549	8553170	3	21,249,676,	0,207,576,
#Deleted in new
chr6	32979541	32981286	chr6:32979541-32981286	0	+	32979541	32979541	8553170	2	923,705,	0,1040,
#Deleted in new
chr6	32979681	32980766	chr6:32979681-32980766	0	+	32979681	32979681	8553170	3	451,123,185,	0,660,900,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	33004177	33009612	chr6:33004177-33009612	3	-	33006837	33009536	0	5	2664,136,282,249,158,	0,2902,3133,3835,5277,
#Deleted in new
chr6	33006606	33007384	chr6:33006606-33007384	0	-	33006606	33006606	8553170	3	235,136,31,	0,473,747,
#Deleted in new
chr6	33006800	33008054	chr6:33006800-33008054	0	-	33006800	33006800	8553170	3	41,513,42,	0,279,1212,
#Deleted in new
chr6	33007444	33008124	chr6:33007444-33008124	0	-	33007444	33007444	8553170	2	433,112,	0,568,
#Deleted in new
chr6	33007496	33009579	chr6:33007496-33009579	0	-	33007496	33009536	789624	3	96,82,125,	0,516,1958,
#Deleted in new
chr6	33008060	33009582	chr6:33008060-33009582	0	-	33008060	33008060	8553170	2	344,128,	0,1394,
#Partially deleted in new
chr6	33064568	33080710	chr6:33064568-33080710	3	-	33068649	33073570	0	6	779,167,282,246,199,31,	0,4069,4450,5072,8902,16111,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	33065006	33073615	chr6:33065006-33073615	0	-	33065006	33065006	8553170	2	4880,145,	0,8464,
#Deleted in new
chr6	33067659	33069248	chr6:33067659-33069248	0	-	33068649	33069248	789624	2	1145,230,	0,1359,
#Partially deleted in new
chr6	33069018	33080767	chr6:33069018-33080767	0	-	33069018	33073570	789624	4	282,246,302,88,	0,622,4452,11661,
#Partially deleted in new
chr6	33069103	33080755	chr6:33069103-33080755	0	-	33069103	33069103	8553170	3	197,246,76,	0,537,11576,
#Deleted in new
chr6	33069161	33073633	chr6:33069161-33073633	0	-	33069161	33069161	8553170	3	139,246,195,	0,479,4277,
#Partially deleted in new
chr6	33073501	33080775	chr6:33073501-33080775	0	-	33073501	33073570	789624	2	209,96,	0,7178,
#Partially deleted in new
chr6	33075925	33087201	chr6:33075925-33087201	3	+	33076041	33086238	0	6	216,264,282,111,24,663,	0,4746,9024,9853,10293,10613,
#Partially deleted in new
chr6	33076009	33081232	chr6:33076009-33081232	0	+	33076009	33076009	8553170	2	132,561,	0,4662,
#Deleted in new
chr6	33079450	33079860	chr6:33079450-33079860	7	+	33079450	33079450	16724991	1	410,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	33080385	33084012	chr6:33080385-33084012	0	+	33080385	33080385	8553170	3	149,264,499,	0,286,3128,
#Partially deleted in new
chr6	33080385	33084957	chr6:33080385-33084957	0	+	33080385	33080385	8553170	3	149,264,8,	0,286,4564,
#Partially deleted in new
chr6	33080442	33085231	chr6:33080442-33085231	0	+	33080442	33080442	8553170	2	493,282,	0,4507,
#Partially deleted in new
chr6	33080486	33085889	chr6:33080486-33085889	0	+	33080486	33085889	789624	4	48,247,282,111,	0,202,4463,5292,
#Partially deleted in new
chr6	33080671	33087201	chr6:33080671-33087201	0	+	33080671	33086547	789624	5	264,282,128,24,663,	0,4278,5107,5547,5867,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	33080940	33083890	chr6:33080940-33083890	0	+	33080940	33080940	8553170	3	291,132,377,	0,1066,2573,
#Partially deleted in new
chr6	33091752	33097295	chr6:33091752-33097295	7	-	33091752	33091752	16724991	4	151,282,245,55,	0,366,1140,5488,
#Partially deleted in new
chr6	33103793	33107330	chr6:33103793-33107330	7	-	33103793	33103793	16724991	6	39,60,167,211,136,63,	0,144,2173,2786,3112,3474,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	33112450	33119149	chr6:33112450-33119149	5	+	33112450	33112450	16724991	3	165,264,759,	0,4506,5940,
#Partially deleted in new
chr6	33112515	33129084	chr6:33112515-33129084	7	+	33112515	33112515	16724991	5	100,264,281,111,20,	0,4441,15302,16118,16549,
#Partially deleted in new
chr6	33131215	33143325	chr6:33131215-33143325	7	-	33131215	33131215	16724991	2	127,102,	0,12008,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	33144782	33147767	chr6:33144782-33147767	3	+	33144782	33144782	8553170	2	164,553,	0,2432,
#Partially deleted in new
chr6	33162680	33192499	chr6:33162680-33192499	1	-	33163677	33192240	789624	64	1138,207,113,268,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,87,75,63,42,60,63,192,163,211,150,341,	0,1586,2171,2868,3250,3490,3832,4039,4389,4583,4745,5118,5838,6025,6274,6702,7150,7366,7645,7876,8129,8433,8590,8786,9032,9369,9608,9849,10379,10667,10821,11020,11192,11330,11484,11846,12893,13335,13578,13752,14040,14311,14500,14731,14981,15451,15627,15754,15998,16239,16392,16550,16750,17038,17577,17987,18283,18430,22311,23946,25681,26297,26639,29478,
#Partially deleted in new
chr6	33162691	33192468	chr6:33162691-33192468	3	-	33163677	33192240	789624	66	1127,207,113,268,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,87,75,63,42,60,180,63,78,192,163,211,150,310,	0,1575,2160,2857,3239,3479,3821,4028,4378,4572,4734,5107,5827,6014,6263,6691,7139,7355,7634,7865,8118,8422,8579,8775,9021,9358,9597,9838,10368,10656,10810,11009,11181,11319,11473,11835,12882,13324,13567,13741,14029,14300,14489,14720,14970,15440,15616,15743,15987,16228,16381,16539,16739,17027,17566,17976,18272,18419,21453,22300,23009,23935,25670,26286,26628,29467,
#Partially deleted in new
chr6	33162691	33192468	chr6:33162691-33192468	1	-	33163677	33192240	789624	63	1127,207,113,268,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,87,75,63,42,60,192,163,211,150,310,	0,1575,2160,2857,3239,3479,3821,4028,4378,4572,4734,5107,5827,6014,6263,6691,7139,7355,7634,7865,8118,8422,8579,8775,9021,9358,9597,9838,10368,10656,10810,11009,11181,11319,11473,11835,12882,13324,13567,13741,14029,14300,14489,14720,14970,15440,15616,15743,15987,16228,16381,16539,16739,17027,17566,17976,18272,18419,23935,25670,26286,26628,29467,
#Partially deleted in new
chr6	33162694	33177893	chr6:33162694-33177893	0	-	33162694	33162694	8553170	9	1124,207,113,268,37,45,54,45,91,	0,1572,2157,2854,14314,14486,14717,14967,15108,
#Partially deleted in new
chr6	33178131	33192467	chr6:33178131-33192467	0	-	33178131	33192240	789624	21	54,45,54,54,54,54,54,57,87,75,63,42,60,180,63,78,192,163,211,150,309,	0,176,303,547,788,941,1099,1299,1587,2126,2536,2832,2979,6013,6860,7569,8495,10230,10846,11188,14027,
#Partially deleted in new
chr6	33186444	33192454	chr6:33186444-33192454	1	-	33186551	33192240	789624	5	374,163,211,150,296,	0,1917,2533,2875,5714,
#Partially deleted in new
chr6	33193587	33200688	chr6:33193587-33200688	3	-	33194681	33200476	0	10	1242,106,92,133,130,173,180,157,248,447,	0,1357,1775,1982,2319,2846,4174,4720,5581,6654,
#Partially deleted in new
chr6	33193587	33200614	chr6:33193587-33200614	1	-	33194681	33200476	0	10	1242,106,104,133,130,173,180,157,248,373,	0,1357,1775,1982,2319,2846,4174,4720,5581,6654,
#Partially deleted in new
chr6	33194219	33200637	chr6:33194219-33200637	0	-	33198459	33200476	789624	9	610,106,92,133,130,173,180,157,396,	0,725,1143,1350,1687,2214,3542,4088,6022,
#Deleted in new
chr6	33194663	33195360	chr6:33194663-33195360	0	-	33194663	33194663	8553170	2	166,416,	0,281,
#Deleted in new
chr6	33195784	33198635	chr6:33195784-33198635	0	-	33195784	33195784	8553170	3	822,180,328,	0,1977,2523,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	33199600	33199696	chr6:33199600-33199696	3	+	33199600	33199600	8553170	1	96,	0,
#Deleted in new
chr6	33200444	33202692	chr6:33200444-33202692	0	+	33200797	33202692	789624	5	494,169,54,165,133,	0,1300,1627,1818,2115,
#Deleted in new
chr6	33200825	33204439	chr6:33200825-33204439	3	+	33201245	33203813	789624	8	113,415,169,54,165,141,197,899,	0,416,919,1246,1437,1734,2084,2715,
#Deleted in new
chr6	33200872	33204439	chr6:33200872-33204439	1	+	33201245	33203813	789624	7	784,169,54,165,141,197,899,	0,872,1199,1390,1687,2037,2668,
#Deleted in new
chr6	33202254	33204439	chr6:33202254-33204439	0	+	33202254	33202254	8553170	4	173,141,197,899,	0,305,655,1286,
#Deleted in new
chr6	33204641	33206831	chr6:33204641-33206831	3	+	33204668	33206654	0	9	79,218,117,93,86,85,43,75,194,	0,260,579,805,998,1186,1492,1733,1996,
#Deleted in new
chr6	33204685	33206449	chr6:33204685-33206449	0	+	33204685	33204685	8553170	7	434,117,93,86,85,43,75,	0,535,761,954,1142,1448,1689,
#Deleted in new
chr6	33207834	33207944	chr6:33207834-33207944	3	+	33207834	33207834	5263520	1	110,	0,
#Partially deleted in new
chr6	33208494	33212722	chr6:33208494-33212722	3	+	33208822	33212399	789624	7	150,136,161,216,390,274,425,	0,270,1131,1420,2663,3234,3803,
#Partially deleted in new
chr6	33209559	33212722	chr6:33209559-33212722	0	+	33209559	33209559	8553170	5	227,216,390,274,425,	0,355,1598,2169,2738,
#Deleted in new
chr6	33215704	33216328	chr6:33215704-33216328	7	+	33215704	33215704	16724991	1	624,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	33237798	33239690	chr6:33237798-33239690	7	+	33237798	33237798	16724991	3	553,145,286,	0,837,1606,
#Partially deleted in new
chr6	33246074	33246856	chr6:33246074-33246856	3	-	33246074	33246074	8553170	2	476,118,	0,664,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	33249533	33254944	chr6:33249533-33254944	3	+	33249533	33249533	789624	5	122,100,96,194,247,	0,256,1082,1979,5164,
#Partially deleted in new
chr6	33249583	33251939	chr6:33249583-33251939	1	+	33249583	33249583	8553170	4	72,100,103,427,	0,206,1025,1929,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	33249595	33254989	chr6:33249595-33254989	0	+	33249595	33249595	8553170	5	60,100,96,129,292,	0,194,1020,1982,5102,
#Partially deleted in new
chr6	33250271	33271894	chr6:33250271-33271894	3	-	33250840	33271675	789624	20	716,119,112,66,108,96,124,119,156,134,58,133,101,151,176,68,76,53,85,309,	0,1246,1588,13212,13500,13736,14102,14510,16285,16916,17410,17593,17836,18227,18742,19218,19472,19727,19927,21314,
#Partially deleted in new
chr6	33250271	33272047	chr6:33250271-33272047	0	-	33250271	33250271	8553170	18	716,119,112,66,108,96,124,119,156,133,101,151,176,68,76,53,85,143,	0,1246,1588,13212,13500,13736,14102,14510,16285,17593,17836,18227,18742,19218,19472,19727,19927,21633,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr6	33250271	33271876	chr6:33250271-33271876	1	-	33271408	33271675	789624	19	716,119,112,66,108,96,124,119,156,134,58,133,101,151,176,68,76,85,740,	0,1246,1588,13212,13500,13736,14102,14510,16285,16916,17410,17593,17836,18227,18742,19218,19472,19927,20865,
#Partially deleted in new
chr6	33250278	33251635	chr6:33250278-33251635	0	+	33250278	33250278	8553170	2	433,36,	0,1321,
#Partially deleted in new
chr6	33250605	33263613	chr6:33250605-33263613	0	-	33250605	33250605	8553170	4	382,119,112,130,	0,912,1254,12878,
#Partially deleted in new
chr6	33250810	33264303	chr6:33250810-33264303	0	-	33250810	33250810	8553170	6	177,119,112,66,108,296,	0,707,1049,12673,12961,13197,
#Partially deleted in new
chr6	33251916	33264564	chr6:33251916-33264564	0	-	33251916	33251916	8553170	5	55,66,97,96,191,	0,11567,11866,12091,12457,
#Deleted in new
chr6	33263547	33264222	chr6:33263547-33264222	0	-	33263547	33263547	8553170	2	332,215,	0,460,
#Partially deleted in new
chr6	33264078	33267265	chr6:33264078-33267265	0	-	33264078	33264078	8553170	4	25,527,156,78,	0,295,2478,3109,
#Deleted in new
chr6	33267465	33268153	chr6:33267465-33268153	0	-	33267465	33267465	8553170	3	274,133,46,	0,399,642,
#Partially deleted in new
chr6	33267869	33271777	chr6:33267869-33271777	0	-	33267869	33267869	8553170	9	128,101,151,176,68,76,53,85,87,	0,238,629,1144,1620,1874,2129,2329,3821,
#Partially deleted in new
chr6	33267870	33271884	chr6:33267870-33271884	0	-	33267870	33267870	8553170	9	127,101,151,205,68,76,53,85,194,	0,237,628,1143,1619,1873,2128,2328,3820,
#Partially deleted in new
chr6	33272009	33276510	chr6:33272009-33276510	3	+	33272119	33276466	0	6	113,99,87,102,92,120,	0,618,3787,3955,4166,4381,
#Partially deleted in new
chr6	33272074	33276510	chr6:33272074-33276510	1	+	33275985	33276466	789624	6	48,140,87,102,92,120,	0,512,3722,3890,4101,4316,
#Partially deleted in new
chr6	33272087	33276505	chr6:33272087-33276505	0	+	33272087	33272087	8553170	5	35,99,87,303,115,	0,540,3709,3877,4303,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	33272095	33276510	chr6:33272095-33276510	0	+	33272095	33272095	8553170	7	27,99,158,87,102,92,120,	0,532,3404,3701,3869,4080,4295,
#Partially deleted in new
chr6	33272098	33276505	chr6:33272098-33276505	0	+	33272098	33272098	8553170	5	24,99,87,102,330,	0,529,3698,3866,4077,
#Partially deleted in new
chr6	33272131	33276510	chr6:33272131-33276510	0	+	33272131	33272131	8553170	5	595,87,102,92,120,	0,3665,3833,4044,4259,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	33275320	33276510	chr6:33275320-33276510	0	+	33275320	33275320	8553170	2	563,546,	0,644,
#Deleted in new
chr6	33275865	33276510	chr6:33275865-33276510	0	+	33275865	33275865	8553170	3	201,92,120,	0,310,525,
#Deleted in new
chr6	33277131	33278825	chr6:33277131-33278825	3	+	33277419	33278556	789624	1	1694,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	33278687	33284832	chr6:33278687-33284832	0	+	33278687	33278687	8553170	2	313,487,	0,5658,
#Partially deleted in new
chr6	33279107	33289527	chr6:33279107-33289527	3	-	33279275	33289170	789624	15	267,114,96,95,314,100,136,151,105,62,88,113,81,210,426,	0,389,656,1320,1566,7687,7983,8247,8506,8857,9040,9250,9506,9696,9994,
#Deleted in new
chr6	33279107	33280911	chr6:33279107-33280911	0	-	33279107	33279107	8553170	5	267,114,96,95,97,	0,389,656,1320,1707,
#Deleted in new
chr6	33279107	33280851	chr6:33279107-33280851	0	-	33279107	33279107	8553170	4	503,96,95,178,	0,656,1320,1566,
#Partially deleted in new
chr6	33279570	33287429	chr6:33279570-33287429	0	-	33279570	33279570	8553170	6	40,96,560,100,136,75,	0,193,857,7224,7520,7784,
#Partially deleted in new
chr6	33280915	33288887	chr6:33280915-33288887	0	-	33280915	33288887	789624	10	72,100,136,151,105,38,88,113,81,84,	0,5879,6175,6439,6698,7049,7232,7442,7698,7888,
#Deleted in new
chr6	33287226	33287289	chr6:33287226-33287289	3	-	33287226	33287226	5263520	1	63,	0,
#Deleted in new
chr6	33287242	33288026	chr6:33287242-33288026	0	-	33287242	33287242	8553170	2	476,62,	0,722,
#Deleted in new
chr6	33287491	33289247	chr6:33287491-33289247	0	-	33287491	33287491	8553170	7	14,105,62,323,81,210,146,	0,122,473,656,1122,1312,1610,
#Deleted in new
chr6	33287663	33289202	chr6:33287663-33289202	0	-	33287663	33287663	8553170	7	55,62,88,113,131,210,101,	0,301,484,694,900,1140,1438,
#Deleted in new
chr6	33288055	33289012	chr6:33288055-33289012	0	-	33288055	33288055	8553170	4	180,113,81,209,	0,302,558,748,
#Deleted in new
chr6	33289301	33290933	chr6:33289301-33290933	3	+	33289856	33290845	789624	5	319,151,71,125,218,	0,468,872,1024,1414,
#Deleted in new
chr6	33289594	33290933	chr6:33289594-33290933	1	+	33289856	33290845	789624	4	326,71,125,218,	0,579,731,1121,
#Deleted in new
chr6	33289595	33290875	chr6:33289595-33290875	0	+	33289595	33289595	8553170	4	33,151,71,550,	0,174,578,730,
#Deleted in new
chr6	33289596	33290934	chr6:33289596-33290934	1	+	33289856	33290845	789624	5	32,151,71,125,219,	0,173,577,729,1119,
#Deleted in new
chr6	33289596	33290862	chr6:33289596-33290862	1	+	33289856	33290845	789624	5	32,146,71,125,147,	0,178,577,729,1119,
#Deleted in new
chr6	33289626	33290868	chr6:33289626-33290868	0	+	33289626	33289626	8553170	2	294,695,	0,547,
#Deleted in new
chr6	33289774	33298401	chr6:33289774-33298401	1	+	33289856	33296880	789624	4	146,71,125,1573,	0,399,551,7054,
#Deleted in new
chr6	33290244	33290325	chr6:33290244-33290325	3	+	33290244	33290244	5263520	1	81,	0,
#Deleted in new
chr6	33291653	33298930	chr6:33291653-33298930	0	-	33291653	33291653	8553170	17	660,115,291,112,96,122,33,75,69,85,104,252,298,51,179,84,61,	0,776,1362,1759,1950,2141,2380,3034,3323,3473,3665,3854,4374,4760,4944,5378,7216,
#Deleted in new
chr6	33291653	33298521	chr6:33291653-33298521	0	-	33291653	33291653	8553170	16	660,115,291,287,122,33,75,69,85,104,252,298,51,179,84,67,	0,776,1362,1759,2141,2380,3034,3323,3473,3665,3854,4374,4760,4944,5378,6801,
#Deleted in new
chr6	33291653	33297103	chr6:33291653-33297103	0	-	33291653	33291653	8553170	15	660,115,291,112,96,122,33,75,69,85,104,252,51,179,72,	0,776,1362,1759,1950,2141,2380,3034,3323,3473,3665,3854,4760,4944,5378,
#Deleted in new
chr6	33291653	33299324	chr6:33291653-33299324	3	-	33292101	33298610	789624	18	660,115,291,112,96,122,33,75,69,85,104,252,298,51,179,84,197,455,	0,776,1362,1759,1950,2141,2380,3034,3323,3473,3665,3854,4374,4760,4944,5378,6801,7216,
#Deleted in new
chr6	33292105	33293930	chr6:33292105-33293930	0	-	33292105	33292105	8553170	5	208,115,291,287,136,	0,324,910,1307,1689,
#Deleted in new
chr6	33293094	33295623	chr6:33293094-33295623	0	-	33293094	33293094	8553170	9	212,112,96,272,75,69,85,104,116,	0,318,509,700,1593,1882,2032,2224,2413,
#Deleted in new
chr6	33295686	33297986	chr6:33295686-33297986	0	-	33295686	33295686	8553170	5	639,51,179,84,56,	0,727,911,1345,2244,
#Deleted in new
chr6	33295805	33297993	chr6:33295805-33297993	0	-	33295805	33295805	8553170	6	520,51,179,84,130,63,	0,608,792,1226,1408,2125,
#Deleted in new
chr6	33296098	33297692	chr6:33296098-33297692	0	-	33296098	33296098	8553170	5	227,51,179,84,479,	0,315,499,933,1115,
#Deleted in new
chr6	33296156	33297386	chr6:33296156-33297386	0	-	33296156	33296156	8553170	4	169,51,179,355,	0,257,441,875,
#Deleted in new
chr6	33296443	33298810	chr6:33296443-33298810	0	-	33296443	33298610	789624	4	21,179,84,356,	0,154,588,2011,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	33299693	33314387	chr6:33299693-33314387	1	-	33301759	33314041	0	8	2078,35,90,342,399,261,171,383,	0,4261,4434,4603,5295,13523,14000,14311,
#Partially deleted in new
chr6	33301759	33314254	chr6:33301759-33314254	1	-	33301759	33314041	789624	7	12,35,90,342,399,171,250,	0,2195,2368,2537,3229,11934,12245,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	33303572	33314212	chr6:33303572-33314212	3	-	33303774	33314041	789624	7	417,90,342,399,261,171,208,	0,555,724,1416,9644,10121,10432,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	33303662	33314049	chr6:33303662-33314049	0	-	33303662	33303662	8553170	4	1725,261,171,45,	0,9554,10031,10342,
#Partially deleted in new
chr6	33304267	33314041	chr6:33304267-33314041	0	-	33304267	33304267	8553170	5	371,399,261,171,37,	0,721,8949,9426,9737,
#Partially deleted in new
chr6	33304299	33314387	chr6:33304299-33314387	1	-	33304299	33314041	789624	4	82,181,171,383,	0,8997,9394,9705,
#Partially deleted in new
chr6	33305108	33314215	chr6:33305108-33314215	0	-	33305108	33314041	789624	3	279,261,211,	0,8108,8896,
#Deleted in new
chr6	33313013	33313955	chr6:33313013-33313955	0	-	33313013	33313013	8553170	2	464,262,	0,680,
#Partially deleted in new
chr6	33314405	33317942	chr6:33314405-33317942	3	-	33315011	33316916	789624	2	2580,65,	0,3472,
#Partially deleted in new
chr6	33314417	33317735	chr6:33314417-33317735	1	-	33315011	33316916	789624	2	2568,83,	0,3235,
#Partially deleted in new
chr6	33316468	33317941	chr6:33316468-33317941	0	-	33316468	33316916	789624	2	517,64,	0,1409,
#Deleted in new
chr6	33318557	33323010	chr6:33318557-33323010	1	-	33318742	33321925	0	8	245,223,475,214,212,832,256,149,	0,439,822,1453,1822,2178,3161,4304,
#Deleted in new
chr6	33318557	33323014	chr6:33318557-33323014	1	-	33318742	33321925	0	8	245,223,475,214,212,832,259,153,	0,439,822,1453,1822,2178,3161,4304,
#Deleted in new
chr6	33318558	33323016	chr6:33318558-33323016	3	-	33318742	33321549	0	7	244,223,475,214,212,832,155,	0,438,821,1452,1821,2177,4303,
#Deleted in new
chr6	33318558	33323016	chr6:33318558-33323016	1	-	33318746	33321925	0	9	244,53,18,475,214,212,832,259,155,	0,438,643,821,1452,1821,2177,3160,4303,
#Deleted in new
chr6	33319532	33322930	chr6:33319532-33322930	0	-	33319532	33319532	8553170	4	322,214,212,69,	0,478,847,3329,
#Deleted in new
chr6	33319584	33321869	chr6:33319584-33321869	0	-	33319584	33319584	8553170	4	270,214,212,151,	0,426,795,2134,
#Deleted in new
chr6	33319663	33320460	chr6:33319663-33320460	0	-	33319663	33319663	8553170	2	191,450,	0,347,
#Deleted in new
chr6	33320868	33322918	chr6:33320868-33322918	0	-	33320868	33320868	8553170	2	699,57,	0,1993,
#Deleted in new
chr6	33321239	33322945	chr6:33321239-33322945	0	-	33321239	33321925	789624	3	328,290,84,	0,479,1622,
#Partially deleted in new
chr6	33321385	33329286	chr6:33321385-33329286	0	-	33329025	33329265	789624	4	182,259,60,300,	0,333,2585,7601,
#Deleted in new
chr6	33321610	33322957	chr6:33321610-33322957	0	-	33321610	33321610	8553170	2	367,96,	0,1251,
#Deleted in new
chr6	33321781	33322803	chr6:33321781-33322803	0	-	33321781	33321925	789624	2	196,175,	0,847,
#Partially deleted in new
chr6	33323624	33329269	chr6:33323624-33329269	3	-	33329025	33329265	789624	3	240,60,283,	0,346,5362,
#Deleted in new
chr6	33338977	33339495	chr6:33338977-33339495	7	+	33338977	33338977	16724991	1	518,	0,
#Deleted in new
chr6	33365547	33366243	chr6:33365547-33366243	7	-	33365547	33365547	16724991	1	696,	0,
#Deleted in new
chr6	33389373	33389475	chr6:33389373-33389475	7	-	33389373	33389373	16724991	1	102,	0,
#Partially deleted in new
chr6	33391535	33409924	chr6:33391535-33409924	3	+	33391985	33409690	0	11	462,138,100,54,51,401,780,291,74,76,279,	0,6493,6752,11778,11949,12193,13316,14660,15056,15264,18110,
#Partially deleted in new
chr6	33391860	33403859	chr6:33391860-33403859	0	+	33391985	33403859	789624	7	137,138,100,123,54,51,131,	0,6168,6427,8531,11453,11624,11868,
#Partially deleted in new
chr6	33400058	33400556	chr6:33400058-33400556	7	-	33400058	33400058	16724991	1	498,	0,
#Partially deleted in new
chr6	33400090	33403866	chr6:33400090-33403866	0	+	33400090	33400090	8553170	4	424,54,51,138,	0,3223,3394,3638,
#Deleted in new
chr6	33406220	33407090	chr6:33406220-33407090	0	+	33406220	33406923	789624	3	266,74,291,	0,371,579,
#Partially deleted in new
chr6	33410398	33413294	chr6:33410398-33413294	0	+	33412263	33413294	789624	6	107,50,175,82,96,99,	0,767,1849,2109,2299,2797,
#Partially deleted in new
chr6	33410689	33415871	chr6:33410689-33415871	0	+	33412263	33415266	789624	15	526,175,82,96,101,149,96,69,124,68,105,127,69,81,62,	0,1558,1818,2008,2506,2719,3046,3351,3553,3787,4035,4265,4571,4900,5120,
#Partially deleted in new
chr6	33410750	33413831	chr6:33410750-33413831	0	+	33412263	33413831	789624	7	137,175,82,96,101,149,96,	0,1497,1757,1947,2445,2658,2985,
#Partially deleted in new
chr6	33410757	33412779	chr6:33410757-33412779	0	+	33412263	33412521	789624	4	130,175,74,82,	0,1490,1758,1940,
#Partially deleted in new
chr6	33410960	33416453	chr6:33410960-33416453	1	+	33412263	33415874	0	14	255,175,82,96,101,149,96,69,124,68,105,179,81,644,	0,1287,1547,1737,2235,2448,2775,3080,3282,3516,3764,4005,4629,4849,
#Partially deleted in new
chr6	33410960	33416453	chr6:33410960-33416453	3	+	33412263	33416098	0	15	255,175,82,96,101,149,96,69,124,68,105,190,95,81,644,	0,1287,1547,1737,2235,2448,2775,3080,3282,3516,3764,3994,4274,4629,4849,
#Partially deleted in new
chr6	33411125	33416051	chr6:33411125-33416051	0	+	33412263	33415266	789624	15	90,175,82,96,101,149,96,69,124,68,105,179,95,81,242,	0,1122,1382,1572,2070,2283,2610,2915,3117,3351,3599,3840,4109,4464,4684,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	33412983	33413944	chr6:33412983-33413944	0	+	33412983	33412983	8553170	2	313,536,	0,425,
#Deleted in new
chr6	33414335	33416213	chr6:33414335-33416213	0	+	33414335	33414335	8553170	6	31,68,420,95,81,404,	0,141,389,899,1254,1474,
#Deleted in new
chr6	33415064	33416414	chr6:33415064-33416414	0	+	33415064	33415266	789624	4	80,99,78,605,	0,170,528,745,
#Deleted in new
chr6	33415240	33416312	chr6:33415240-33416312	0	+	33415240	33415240	8553170	2	430,503,	0,569,
#Deleted in new
chr6	33416441	33418317	chr6:33416441-33418317	3	-	33416649	33418185	0	6	335,50,46,60,215,231,	0,478,655,809,1039,1645,
#Deleted in new
chr6	33416441	33418043	chr6:33416441-33418043	0	-	33416441	33416441	8553170	5	335,50,46,60,563,	0,478,655,809,1039,
#Deleted in new
chr6	33416541	33417543	chr6:33416541-33417543	0	-	33416541	33416541	8553170	4	235,50,214,63,	0,378,555,939,
#Deleted in new
chr6	33416541	33418288	chr6:33416541-33418288	1	-	33416649	33417668	0	5	235,50,46,60,808,	0,378,555,709,939,
#Deleted in new
chr6	33416542	33418122	chr6:33416542-33418122	1	-	33416649	33418000	0	6	234,50,46,60,215,164,	0,377,554,708,938,1416,
#Deleted in new
chr6	33416549	33418142	chr6:33416549-33418142	0	-	33417246	33418142	789624	6	227,50,46,64,215,56,	0,370,547,697,931,1537,
#Deleted in new
chr6	33416549	33418107	chr6:33416549-33418107	0	-	33417871	33418000	789624	6	227,50,46,60,215,239,	0,370,547,701,931,1319,
#Deleted in new
chr6	33416549	33418086	chr6:33416549-33418086	1	-	33416671	33418000	789624	5	227,46,60,215,128,	0,547,701,931,1409,
#Deleted in new
chr6	33416549	33418058	chr6:33416549-33418058	1	-	33416624	33417668	789624	7	111,28,50,46,60,336,100,	0,199,370,547,701,931,1409,
#Deleted in new
chr6	33416549	33417931	chr6:33416549-33417931	1	-	33416649	33417668	0	6	227,50,46,60,215,63,	0,370,547,701,931,1319,
#Deleted in new
chr6	33416550	33417889	chr6:33416550-33417889	0	-	33416550	33416550	8553170	4	226,50,46,639,	0,369,546,700,
#Deleted in new
chr6	33416551	33417921	chr6:33416551-33417921	1	-	33416649	33417668	0	5	225,50,46,60,441,	0,368,545,699,929,
#Deleted in new
chr6	33416560	33418108	chr6:33416560-33418108	0	-	33416560	33416560	8553170	2	750,628,	0,920,
#Deleted in new
chr6	33416618	33418070	chr6:33416618-33418070	1	-	33416649	33417668	0	6	158,50,46,60,336,112,	0,301,478,632,862,1340,
#Deleted in new
chr6	33417983	33418187	chr6:33417983-33418187	0	-	33417983	33417983	8553170	2	27,101,	0,103,
#Deleted in new
chr6	33419660	33423537	chr6:33419660-33423537	0	+	33419660	33419660	8553170	2	39,61,	0,3816,
#Partially deleted in new
chr6	33419908	33441759	chr6:33419908-33441759	0	+	33420264	33440655	789624	14	24,72,122,106,92,122,154,99,624,145,145,413,202,179,	0,351,3568,5889,12252,12776,15243,15606,17759,18510,18866,20644,21264,21672,
#Partially deleted in new
chr6	33420064	33453689	chr6:33420064-33453689	1	+	33420264	33451906	789624	19	267,122,106,92,122,154,99,624,145,145,237,202,179,42,1072,174,212,91,1930,	0,3412,5733,12096,12620,15087,15450,17603,18354,18710,20664,21108,21516,22388,22824,24379,26510,27778,31695,
#Partially deleted in new
chr6	33420069	33439121	chr6:33420069-33439121	0	+	33420069	33420069	8553170	10	262,122,106,92,122,154,99,624,145,347,	0,3407,5728,12091,12615,15082,15445,17598,18349,18705,
#Partially deleted in new
chr6	33420069	33457541	chr6:33420069-33457541	3	+	33420264	33451906	789624	19	262,122,106,92,122,154,99,624,145,145,237,202,179,42,1072,174,212,91,5782,	0,3407,5728,12091,12615,15082,15445,17598,18349,18705,20659,21103,21511,22383,22819,24374,26505,27773,31690,
#Partially deleted in new
chr6	33420200	33451862	chr6:33420200-33451862	1	+	33420264	33451802	789624	19	131,122,106,92,122,154,99,624,145,145,237,202,179,42,1072,174,212,90,103,	0,3276,5597,11960,12484,14951,15314,17467,18218,18574,20528,20972,21380,22252,22688,24243,26374,27642,31559,
#Partially deleted in new
chr6	33420254	33451842	chr6:33420254-33451842	1	+	33420264	33451802	789624	18	77,122,106,92,122,154,99,624,145,145,237,202,179,1072,174,206,90,83,	0,3222,5543,11906,12430,14897,15260,17413,18164,18520,20474,20918,21326,22634,24189,26326,27588,31505,
#Partially deleted in new
chr6	33420264	33453689	chr6:33420264-33453689	1	+	33420264	33447893	789624	19	67,122,106,92,122,154,99,624,145,145,237,202,179,42,1072,174,212,103,1930,	0,3212,5533,11896,12420,14887,15250,17403,18154,18510,20464,20908,21316,22188,22624,24179,26310,27565,31495,
#Partially deleted in new
chr6	33420264	33449167	chr6:33420264-33449167	1	+	33420264	33448803	789624	19	67,122,106,92,122,154,99,624,145,145,237,202,179,42,1072,174,212,91,379,	0,3212,5533,11896,12420,14887,15250,17403,18154,18510,20464,20908,21316,22188,22624,24179,26310,27578,28524,
#Partially deleted in new
chr6	33420309	33452395	chr6:33420309-33452395	0	+	33420309	33448803	789624	20	22,122,106,92,122,154,99,624,145,145,237,202,179,42,1072,174,212,91,80,636,	0,3167,5488,11851,12375,14842,15205,17358,18109,18465,20419,20863,21271,22143,22579,24134,26265,27533,28479,31450,
#Deleted in new
chr6	33420723	33423566	chr6:33420723-33423566	0	+	33420723	33420723	8553170	2	71,90,	0,2753,
#Deleted in new
chr6	33422830	33423566	chr6:33422830-33423566	0	+	33422830	33422830	8553170	2	67,90,	0,646,
#Deleted in new
chr6	33423328	33423566	chr6:33423328-33423566	0	+	33423328	33423328	8553170	2	42,90,	0,148,
#Deleted in new
chr6	33425099	33425886	chr6:33425099-33425886	0	+	33425099	33425099	8553170	2	59,89,	0,698,
#Deleted in new
chr6	33425393	33425868	chr6:33425393-33425868	0	+	33425393	33425393	8553170	2	29,71,	0,404,
#Deleted in new
chr6	33425456	33425854	chr6:33425456-33425854	0	+	33425456	33425456	8553170	2	43,57,	0,341,
#Deleted in new
chr6	33425464	33425892	chr6:33425464-33425892	0	+	33425464	33425464	8553170	2	96,95,	0,333,
#Deleted in new
chr6	33425469	33425812	chr6:33425469-33425812	0	+	33425469	33425469	8553170	2	64,15,	0,328,
#Deleted in new
chr6	33426678	33432203	chr6:33426678-33432203	0	+	33426678	33426678	8553170	2	57,43,	0,5482,
#Deleted in new
chr6	33426815	33432014	chr6:33426815-33432014	0	+	33426815	33426815	8553170	2	30,70,	0,5129,
#Deleted in new
chr6	33428032	33432252	chr6:33428032-33432252	0	+	33428032	33428032	8553170	2	98,92,	0,4128,
#Deleted in new
chr6	33428229	33432199	chr6:33428229-33432199	0	+	33428276	33432199	789624	2	84,39,	0,3931,
#Partially deleted in new
chr6	33431730	33452210	chr6:33431730-33452210	1	+	33431910	33451906	789624	17	298,92,122,154,99,624,145,145,237,202,179,42,1072,174,212,91,451,	0,430,954,3421,3784,5937,6688,7044,8998,9442,9850,10722,11158,12713,14844,16112,20029,
#Partially deleted in new
chr6	33431910	33452092	chr6:33431910-33452092	1	+	33431910	33451802	789624	17	118,92,122,154,99,624,145,145,237,202,179,42,1072,174,212,90,333,	0,250,774,3241,3604,5757,6508,6864,8818,9262,9670,10542,10978,12533,14664,15932,19849,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	33437362	33454453	chr6:33437362-33454453	3	-	33437362	33437362	8553170	3	119,193,184,	0,9243,16907,
#Deleted in new
chr6	33438330	33438437	chr6:33438330-33438437	3	+	33438330	33438330	5263520	1	107,	0,
#Deleted in new
chr6	33441307	33441483	chr6:33441307-33441483	0	+	33441307	33441307	8553170	2	67,33,	0,143,
#Deleted in new
chr6	33441328	33441549	chr6:33441328-33441549	0	+	33441328	33441328	8553170	2	46,72,	0,149,
#Deleted in new
chr6	33441710	33441900	chr6:33441710-33441900	0	+	33441710	33441710	8553170	2	49,51,	0,139,
#Deleted in new
chr6	33446710	33448160	chr6:33446710-33448160	0	+	33446710	33446710	8553170	2	76,318,	0,1132,
#Deleted in new
chr6	33446710	33447766	chr6:33446710-33447766	0	+	33446710	33446710	8553170	2	76,24,	0,1032,
#Deleted in new
chr6	33451504	33451831	chr6:33451504-33451831	0	+	33451504	33451504	8553170	2	89,72,	0,255,
#Deleted in new
chr6	33453969	33455337	chr6:33453969-33455337	0	+	33455100	33455337	789624	2	262,308,	0,1060,
#Deleted in new
chr6	33453986	33454408	chr6:33453986-33454408	1	-	33453986	33453986	8553170	1	422,	0,
#Deleted in new
chr6	33454542	33455515	chr6:33454542-33455515	0	+	33455100	33455515	789624	2	89,486,	0,487,
#Deleted in new
chr6	33454578	33457548	chr6:33454578-33457548	3	+	33455100	33456522	789624	2	197,2519,	0,451,
#Deleted in new
chr6	33455405	33456190	chr6:33455405-33456190	0	+	33455405	33455866	789624	2	82,591,	0,194,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	33540045	33584752	chr6:33540045-33584752	7	+	33540045	33540045	16724991	6	142,57,49,114,205,25,	0,9961,30717,35305,43820,44682,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	33540693	33541000	chr6:33540693-33541000	3	+	33540693	33540693	8553170	1	307,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	33562879	33563130	chr6:33562879-33563130	3	-	33562879	33562879	8553170	1	251,	0,
#Partially deleted in new
chr6	33572546	33580293	chr6:33572546-33580293	1	-	33573802	33577604	789624	7	1361,181,144,11,65,101,269,	0,1487,2751,3246,3317,4988,7478,
#Partially deleted in new
chr6	33572546	33580293	chr6:33572546-33580293	1	-	33574122	33577604	0	7	1361,181,20,144,136,101,269,	0,1487,1959,2751,3246,4988,7478,
#Partially deleted in new
chr6	33572551	33580242	chr6:33572551-33580242	3	-	33573802	33577604	0	6	1356,181,144,136,101,218,	0,1482,2746,3241,4983,7473,
#Partially deleted in new
chr6	33583698	33589026	chr6:33583698-33589026	5	+	33583698	33583698	16724991	7	58,138,113,114,141,179,144,	0,238,1029,1555,1941,2971,5184,
#Partially deleted in new
chr6	33583737	33589026	chr6:33583737-33589026	5	+	33583737	33583737	16724991	6	333,113,149,132,119,114,	0,990,1481,1852,2932,5175,
#Partially deleted in new
chr6	33583737	33589026	chr6:33583737-33589026	5	+	33583737	33583737	16724991	6	333,113,149,132,119,51,	0,990,1481,1852,2932,5238,
#Partially deleted in new
chr6	33584583	33585731	chr6:33584583-33585731	4	+	33584583	33584583	16724991	4	59,110,149,142,	0,147,635,1006,
#Partially deleted in new
chr6	33584583	33585531	chr6:33584583-33585531	4	+	33584583	33584583	16724991	3	59,113,313,	0,144,635,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	33586105	33593338	chr6:33586105-33593338	3	-	33586105	33586105	789624	2	1765,342,	0,6891,
#Partially deleted in new
chr6	33620364	33696574	chr6:33620364-33696574	3	+	33621602	33695780	789624	59	72,1077,71,122,87,159,99,84,147,96,51,143,100,161,142,162,173,120,183,252,145,142,200,130,58,166,165,75,126,123,201,252,126,126,121,191,149,109,91,170,175,185,201,111,96,102,87,111,193,126,173,165,193,105,128,166,161,162,863,	0,250,20119,35401,37567,38305,38656,39101,42163,42546,43135,43373,44505,44688,45470,46764,47427,48150,48609,49960,50306,50800,51664,53226,53843,55326,56403,56650,57139,58056,58274,59517,59964,60190,62159,62842,63655,63992,64233,64409,64994,65278,65688,66044,66644,66861,67113,67692,67874,68291,68873,69669,70552,71250,71436,72363,73180,74559,75347,
#Partially deleted in new
chr6	33621378	33696569	chr6:33621378-33696569	1	+	33621602	33695780	789624	58	313,71,122,87,159,99,84,147,96,51,143,100,161,142,162,173,120,183,252,145,142,200,130,58,166,165,75,126,123,201,252,126,126,121,191,149,109,91,170,175,185,201,111,96,102,87,111,193,126,173,165,193,105,128,166,161,162,858,	0,19105,34387,36553,37291,37642,38087,41149,41532,42121,42359,43491,43674,44456,45750,46413,47136,47595,48946,49292,49786,50650,52212,52829,54312,55389,55636,56125,57042,57260,58503,58950,59176,61145,61828,62641,62978,63219,63395,63980,64264,64674,65030,65630,65847,66099,66678,66860,67277,67859,68655,69538,70236,70422,71349,72166,73545,74333,
#Deleted in new
chr6	33694292	33698657	chr6:33694292-33698657	0	-	33694292	33694292	8553170	1	4365,	0,
#Partially deleted in new
chr6	33695348	33711684	chr6:33695348-33711684	0	-	33697652	33711684	789624	5	100,128,70,75,136,	0,2274,5095,5997,16200,
#Partially deleted in new
chr6	33696760	33711727	chr6:33696760-33711727	3	-	33697652	33711686	789624	4	990,70,75,179,	0,3683,4585,14788,
#Partially deleted in new
chr6	33697567	33711727	chr6:33697567-33711727	1	-	33697652	33711686	789624	3	183,70,179,	0,2876,13981,
#Deleted in new
chr6	33698127	33698234	chr6:33698127-33698234	3	+	33698127	33698127	5263520	1	107,	0,
#Partially deleted in new
chr6	33721669	33746905	chr6:33721669-33746905	3	-	33722719	33735476	789624	6	1518,176,176,214,378,148,	0,3771,5061,6417,13608,25088,
#Partially deleted in new
chr6	33722396	33746905	chr6:33722396-33746905	1	-	33722719	33735476	789624	7	791,176,176,214,378,129,148,	0,3044,4334,5690,12881,16736,24361,
#Partially deleted in new
chr6	33728269	33746848	chr6:33728269-33746848	0	-	33728269	33735476	789624	4	31,378,46,91,	0,7008,18318,18488,
#Partially deleted in new
chr6	33771201	33789136	chr6:33771201-33789136	3	-	33772627	33789116	789624	9	1577,103,102,146,80,77,76,41,756,	0,5752,5936,7040,8898,9875,13150,15532,17179,
#Partially deleted in new
chr6	33771201	33777144	chr6:33771201-33777144	0	-	33772627	33777144	789624	3	1574,103,7,	0,5752,5936,
#Partially deleted in new
chr6	33771221	33782246	chr6:33771221-33782246	0	-	33771221	33771221	8553170	5	1557,103,102,1938,1170,	0,5732,5916,7020,9855,
#Partially deleted in new
chr6	33771221	33789119	chr6:33771221-33789119	1	-	33772627	33789116	789624	10	437,1082,103,102,146,80,77,76,41,739,	0,475,5732,5916,7020,8878,9855,13130,15512,17159,
#Partially deleted in new
chr6	33771431	33789125	chr6:33771431-33789125	0	-	33786771	33789116	789624	9	1347,103,102,146,80,77,76,41,351,	0,5522,5706,6810,8668,9645,12920,15302,17343,
#Partially deleted in new
chr6	33772324	33787001	chr6:33772324-33787001	1	-	33772627	33781100	789624	8	454,103,102,146,80,77,76,268,	0,4629,4813,5917,7775,8752,12027,14409,
#Partially deleted in new
chr6	33772766	33780299	chr6:33772766-33780299	0	-	33772766	33772766	8553170	5	12,103,102,146,200,	0,4187,4371,5475,7333,
#Deleted in new
chr6	33776613	33778339	chr6:33776613-33778339	0	-	33776949	33778339	789624	3	443,102,98,	0,524,1628,
#Deleted in new
chr6	33777011	33781489	chr6:33777011-33781489	0	-	33777011	33777011	8553170	6	45,102,146,80,77,133,	0,126,1230,3088,4065,4345,
#Deleted in new
chr6	33777034	33781547	chr6:33777034-33781547	0	-	33777034	33777034	8553170	5	22,102,146,80,471,	0,103,1207,3065,4042,
#Deleted in new
chr6	33777153	33788830	chr6:33777153-33788830	0	-	33777153	33788830	789624	5	86,146,80,77,450,	0,1088,2946,3923,11227,
#Deleted in new
chr6	33778318	33784669	chr6:33778318-33784669	0	-	33778318	33778318	8553170	4	69,80,77,318,	0,1781,2758,6033,
#Deleted in new
chr6	33778330	33787097	chr6:33778330-33787097	0	-	33778330	33781100	789624	6	57,80,77,76,41,224,	0,1769,2746,6021,8403,8543,
#Deleted in new
chr6	33780001	33784640	chr6:33780001-33784640	0	-	33780001	33780001	8553170	3	178,77,289,	0,1075,4350,
#Partially deleted in new
chr6	33794672	33804011	chr6:33794672-33804011	3	-	33794824	33801163	0	5	163,103,117,124,59,	0,830,4432,6374,9280,
#Partially deleted in new
chr6	33794699	33804002	chr6:33794699-33804002	1	-	33794824	33801163	0	5	133,103,117,124,50,	0,803,4405,6347,9253,
#Partially deleted in new
chr6	33794786	33803980	chr6:33794786-33803980	1	-	33794824	33801163	0	5	49,82,117,124,28,	0,737,4318,6260,9166,
#Partially deleted in new
chr6	33867505	33893653	chr6:33867505-33893653	0	-	33867505	33867505	8553170	2	321,75,	0,26073,
#Deleted in new
chr6	33883169	33883411	chr6:33883169-33883411	7	+	33883169	33883169	16724991	1	242,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	33889510	33896907	chr6:33889510-33896907	3	-	33889510	33889510	789624	3	2941,121,89,	0,4068,7308,
#Deleted in new
chr6	33891701	33892779	chr6:33891701-33892779	0	-	33891701	33891701	8553170	2	750,72,	0,1006,
#Deleted in new
chr6	33891796	33892750	chr6:33891796-33892750	0	-	33891796	33891796	8553170	2	655,55,	0,899,
#Partially deleted in new
chr6	33892309	33896914	chr6:33892309-33896914	0	-	33892309	33892309	8553170	3	142,121,329,	0,1269,4276,
#Partially deleted in new
chr6	33893322	33914410	chr6:33893322-33914410	0	+	33893322	33893322	8553170	2	68,323,	0,20765,
#Deleted in new
chr6	33899134	33899200	chr6:33899134-33899200	3	+	33899134	33899134	5263520	1	66,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	33900354	33927631	chr6:33900354-33927631	3	+	33900354	33900354	8553170	4	119,124,89,3298,	0,13733,20571,23979,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	33911101	33918208	chr6:33911101-33918208	1	+	33911101	33911101	8553170	2	3110,3483,	0,3624,
#Deleted in new
chr6	33999971	34000051	chr6:33999971-34000051	3	-	33999971	33999971	5263520	1	80,	0,
#Partially deleted in new
chr6	34018644	34146137	chr6:34018644-34146137	1	-	34022820	34133496	789624	10	4226,247,936,137,201,155,136,217,882,138,	0,9475,17023,21533,21903,40329,43248,73238,114333,127355,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	34018644	34103854	chr6:34018644-34103854	1	-	34022820	34103700	789624	10	4226,247,936,137,201,141,155,136,217,274,	0,9475,17023,21533,21903,37899,40329,43248,73238,84936,
#Partially deleted in new
chr6	34021850	34146080	chr6:34021850-34146080	3	-	34022820	34133496	789624	11	1020,247,936,137,201,141,155,136,217,882,81,	0,6269,13817,18327,18697,34693,37123,40042,70032,111127,124149,
#Partially deleted in new
chr6	34021853	34155622	chr6:34021853-34155622	1	-	34022820	34155390	789624	9	1017,247,936,137,201,155,136,217,544,	0,6266,13814,18324,18694,37120,40039,70029,133225,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	34022137	34063635	chr6:34022137-34063635	0	-	34022137	34022137	8553170	10	733,495,247,936,137,201,141,155,136,290,	0,2081,5982,13530,18040,18410,34406,36836,39755,41208,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	34022177	34105967	chr6:34022177-34105967	1	-	34022820	34103700	789624	11	693,247,936,137,201,141,155,136,217,270,43,	0,5942,13490,18000,18370,34366,36796,39715,69705,81403,83747,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	34022184	34063239	chr6:34022184-34063239	0	-	34022184	34022184	8553170	8	686,247,936,137,201,141,155,1347,	0,5935,13483,17993,18363,34359,36789,39708,
#Partially deleted in new
chr6	34022432	34111034	chr6:34022432-34111034	1	-	34022820	34110671	789624	10	438,247,936,137,201,141,155,136,217,375,	0,5687,13235,17745,18115,34111,36541,39460,69450,88227,
#Partially deleted in new
chr6	34022596	34102151	chr6:34022596-34102151	1	-	34022820	34102120	789624	10	274,247,936,137,201,141,155,136,217,130,	0,5523,13071,17581,17951,33947,36377,39296,69286,79425,
#Partially deleted in new
chr6	34022820	34146092	chr6:34022820-34146092	0	-	34062001	34133496	789624	10	50,247,936,137,201,141,155,136,882,93,	0,5299,12847,17357,17727,33723,36153,39072,110157,123179,
#Partially deleted in new
chr6	34040704	34100088	chr6:34040704-34100088	0	-	34040704	34059076	789624	5	44,141,155,136,94,	0,15839,18269,21188,59290,
#Partially deleted in new
chr6	34040710	34056323	chr6:34040710-34056323	0	-	34040710	34040710	8553170	2	38,517,	0,15096,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	34054178	34133021	chr6:34054178-34133021	0	-	34054178	34054178	8553170	4	2506,3055,217,44,	0,4795,37704,78799,
#Partially deleted in new
chr6	34091583	34133756	chr6:34091583-34133756	0	-	34091583	34091583	8553170	3	516,383,105,	0,41394,42068,
#Partially deleted in new
chr6	34189779	34191079	chr6:34189779-34191079	7	+	34189779	34189779	16724991	1	1300,	0,
#Partially deleted in new
chr6	34219438	34220066	chr6:34219438-34220066	7	+	34219438	34219438	16724991	2	267,44,	0,584,
#Partially deleted in new
chr6	34236872	34246231	chr6:34236872-34246231	3	+	34240780	34244884	0	6	91,114,179,84,51,1401,	0,331,3864,5839,6595,7958,
#Partially deleted in new
chr6	34236872	34246231	chr6:34236872-34246231	1	+	34240780	34244884	0	5	91,146,84,51,1401,	0,3864,5839,6595,7958,
#Partially deleted in new
chr6	34236872	34246231	chr6:34236872-34246231	1	+	34240780	34244884	0	6	91,114,146,84,51,1401,	0,331,3864,5839,6595,7958,
#Partially deleted in new
chr6	34236872	34246230	chr6:34236872-34246230	1	+	34240780	34244884	0	5	445,179,84,51,1400,	0,3864,5839,6595,7958,
#Partially deleted in new
chr6	34237203	34245151	chr6:34237203-34245151	0	+	34237203	34237203	8553170	5	114,146,84,51,321,	0,3533,5508,6264,7627,
#Partially deleted in new
chr6	34238790	34246230	chr6:34238790-34246230	1	+	34240780	34244884	0	5	167,146,84,51,1400,	0,1946,3921,4677,6040,
#Deleted in new
chr6	34240672	34240736	chr6:34240672-34240736	3	+	34240672	34240672	5263520	1	64,	0,
#Deleted in new
chr6	34246379	34249470	chr6:34246379-34249470	3	-	34246802	34247791	789624	5	489,106,26,184,492,	0,664,1087,1301,2599,
#Deleted in new
chr6	34246380	34249108	chr6:34246380-34249108	1	-	34246513	34247485	789624	5	488,106,26,184,382,	0,663,1086,1300,2346,
#Deleted in new
chr6	34246394	34249040	chr6:34246394-34249040	1	-	34246802	34247791	789624	5	474,106,26,124,62,	0,649,1072,1346,2584,
#Deleted in new
chr6	34246394	34249020	chr6:34246394-34249020	0	-	34247104	34247791	789624	4	474,106,184,42,	0,649,1286,2584,
#Deleted in new
chr6	34246394	34248989	chr6:34246394-34248989	1	-	34246802	34247791	789624	5	474,106,26,184,263,	0,649,1072,1286,2332,
#Deleted in new
chr6	34246394	34249055	chr6:34246394-34249055	0	-	34247104	34247791	789624	4	474,106,184,329,	0,649,1286,2332,
#Deleted in new
chr6	34246448	34248985	chr6:34246448-34248985	0	-	34246448	34246448	8553170	3	1044,184,259,	0,1232,2278,
#Deleted in new
chr6	34246484	34248989	chr6:34246484-34248989	1	-	34246802	34247791	789624	5	384,106,26,124,263,	0,559,982,1256,2242,
#Deleted in new
chr6	34247029	34249054	chr6:34247029-34249054	0	-	34247029	34247029	8553170	2	835,76,	0,1949,
#Partially deleted in new
chr6	34248567	34284268	chr6:34248567-34284268	3	+	34248567	34248567	8553170	3	103,2182,396,	0,30572,35305,
#Partially deleted in new
chr6	34248589	34278116	chr6:34248589-34278116	1	+	34248589	34248589	8553170	2	81,209,	0,29318,
#Partially deleted in new
chr6	34248592	34263621	chr6:34248592-34263621	1	+	34248592	34248592	8553170	2	78,346,	0,14683,
#Deleted in new
chr6	34263310	34263673	chr6:34263310-34263673	7	-	34263310	34263310	16724991	1	363,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	34279678	34392674	chr6:34279678-34392674	3	-	34288752	34392362	0	5	9253,85,45,111,411,	0,13772,15962,62183,112585,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	34279703	34286768	chr6:34279703-34286768	0	+	34279703	34279703	8553170	1	7065,	0,
#Partially deleted in new
chr6	34281914	34284454	chr6:34281914-34284454	1	+	34281914	34281914	8553170	2	648,582,	0,1958,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	34284886	34426071	chr6:34284886-34426071	3	-	34288752	34425221	789624	9	4045,85,45,111,56,78,172,150,40,	0,8564,10754,56975,133482,136843,139782,140185,141145,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	34286968	34426046	chr6:34286968-34426046	1	-	34288752	34425221	789624	9	1963,85,45,111,56,78,172,150,251,	0,6482,8672,54893,131400,134761,137700,138103,138827,
#Partially deleted in new
chr6	34288849	34425148	chr6:34288849-34425148	0	-	34288849	34425148	789624	7	82,85,45,56,78,172,77,	0,4601,6791,129519,132880,135819,136222,
#Partially deleted in new
chr6	34417453	34426125	chr6:34417453-34426125	3	-	34417505	34425221	0	6	94,56,78,172,150,94,	0,915,4276,7215,7618,8578,
#Partially deleted in new
chr6	34417453	34426052	chr6:34417453-34426052	1	-	34417834	34425221	789624	7	94,100,56,78,172,150,21,	0,344,915,4276,7215,7618,8578,
#Partially deleted in new
chr6	34417453	34425580	chr6:34417453-34425580	1	-	34417505	34425221	0	6	94,56,78,172,150,65,	0,915,4276,7215,7618,8062,
#Partially deleted in new
chr6	34417453	34425784	chr6:34417453-34425784	1	-	34417505	34425221	0	6	94,56,78,172,150,227,	0,915,4276,7215,7618,8104,
#Partially deleted in new
chr6	34417453	34426026	chr6:34417453-34426026	1	-	34417505	34425221	0	6	94,56,78,172,150,231,	0,915,4276,7215,7618,8342,
#Partially deleted in new
chr6	34417453	34426067	chr6:34417453-34426067	0	-	34418182	34425221	789624	5	971,78,172,150,36,	0,4276,7215,7618,8578,
#Partially deleted in new
chr6	34417453	34426069	chr6:34417453-34426069	1	-	34417505	34425221	8553170	6	94,56,78,172,150,38,	0,915,4276,7215,7618,8578,
#Partially deleted in new
chr6	34417466	34426069	chr6:34417466-34426069	1	-	34417505	34425221	789624	6	144,56,78,172,150,38,	0,902,4263,7202,7605,8565,
#Partially deleted in new
chr6	34421765	34426041	chr6:34421765-34426041	0	-	34421765	34425221	789624	4	42,172,150,459,	0,2903,3306,3817,
#Deleted in new
chr6	34424275	34426050	chr6:34424275-34426050	0	-	34424275	34424275	8553170	3	565,150,19,	0,796,1756,
#Partially deleted in new
chr6	34466060	34535221	chr6:34466060-34535221	3	+	34526305	34532530	0	10	210,126,157,236,156,176,121,128,188,2801,	0,60182,61271,62581,63336,63605,64182,64399,65539,66360,
#Partially deleted in new
chr6	34466138	34535231	chr6:34466138-34535231	1	+	34526305	34532530	0	10	132,126,157,236,156,176,121,128,188,2811,	0,60104,61193,62503,63258,63527,64104,64321,65461,66282,
#Partially deleted in new
chr6	34466138	34535229	chr6:34466138-34535229	1	+	34527394	34532530	789624	10	132,126,157,236,156,176,121,128,188,2809,	0,60104,61193,62503,63258,63527,64104,64321,65461,66282,
#Partially deleted in new
chr6	34485069	34527714	chr6:34485069-34527714	0	+	34485069	34485069	8553170	3	75,126,383,	0,41173,42262,
#Partially deleted in new
chr6	34514871	34535221	chr6:34514871-34535221	1	+	34526305	34532530	0	10	197,126,157,236,156,176,121,128,188,2801,	0,11371,12460,13770,14525,14794,15371,15588,16728,17549,
#Partially deleted in new
chr6	34514888	34529552	chr6:34514888-34529552	0	+	34514888	34514888	8553170	5	180,126,157,236,156,	0,11354,12443,13753,14508,
#Partially deleted in new
chr6	34514889	34527694	chr6:34514889-34527694	0	+	34514889	34514889	8553170	3	179,126,363,	0,11353,12442,
#Partially deleted in new
chr6	34537801	34556314	chr6:34537801-34556314	3	-	34538273	34544455	0	6	651,147,48,198,465,386,	0,1448,1713,3182,6218,18127,
#Partially deleted in new
chr6	34537801	34556333	chr6:34537801-34556333	1	-	34538273	34544455	0	5	651,147,198,465,405,	0,1448,3182,6218,18127,
#Deleted in new
chr6	34576257	34576656	chr6:34576257-34576656	7	-	34576257	34576257	16724991	1	399,	0,
#Partially deleted in new
chr6	34587287	34696847	chr6:34587287-34696847	3	-	34590564	34696603	789624	5	3313,350,198,155,402,	0,19267,59313,67337,109158,
#Partially deleted in new
chr6	34587287	34696859	chr6:34587287-34696859	1	-	34590564	34696603	789624	4	3313,350,155,414,	0,19267,67337,109158,
#Partially deleted in new
chr6	34590508	34671956	chr6:34590508-34671956	1	-	34590564	34654715	789624	5	92,350,198,155,121,	0,16046,56092,64116,81327,
#Deleted in new
chr6	34616537	34617258	chr6:34616537-34617258	7	+	34616537	34616537	16724991	1	721,	0,
#Partially deleted in new
chr6	34686601	34687106	chr6:34686601-34687106	7	+	34686601	34686601	16724991	2	82,198,	0,307,
#Deleted in new
chr6	34696316	34697470	chr6:34696316-34697470	3	+	34696316	34696316	789624	2	406,312,	0,842,
#Deleted in new
chr6	34696944	34697470	chr6:34696944-34697470	0	+	34696944	34696944	789624	2	53,312,	0,214,
#Deleted in new
chr6	34715612	34715940	chr6:34715612-34715940	7	+	34715612	34715612	16724991	1	328,	0,
#Partially deleted in new
chr6	34744175	34744673	chr6:34744175-34744673	7	+	34744175	34744175	16724991	1	498,	0,
#Partially deleted in new
chr6	34757405	34773794	chr6:34757405-34773794	3	+	34757543	34773570	0	6	146,43,109,90,105,349,	0,506,5189,10502,12885,16040,
#Partially deleted in new
chr6	34757524	34773714	chr6:34757524-34773714	1	+	34762666	34773570	789624	5	27,109,90,105,269,	0,5070,10383,12766,15921,
#Partially deleted in new
chr6	34757553	34773794	chr6:34757553-34773794	1	+	34757840	34773570	789624	5	401,109,90,105,349,	0,5041,10354,12737,15892,
#Partially deleted in new
chr6	34757911	34773532	chr6:34757911-34773532	0	+	34757911	34757911	8553170	6	43,109,90,105,77,87,	0,4683,9996,12379,15019,15534,
#Partially deleted in new
chr6	34792014	34883138	chr6:34792014-34883138	1	+	34792250	34880014	789624	22	280,163,39,92,190,141,171,193,87,171,140,142,194,1448,197,155,151,263,109,107,138,135,	0,29638,29902,31242,42202,42706,43279,44141,63602,64224,64775,65314,65709,66109,71987,75210,75451,78839,79569,79804,87994,90989,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr6	34792079	34877514	chr6:34792079-34877514	3	+	34792250	34872438	789624	21	215,163,39,92,190,141,171,193,87,171,140,142,194,1448,197,155,151,263,109,107,5202,	0,29573,29837,31177,42137,42641,43214,44076,63537,64159,64710,65249,65644,66044,71922,75145,75386,78774,79504,79739,80233,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	34821444	34821542	chr6:34821444-34821542	3	+	34821444	34821444	8553170	1	98,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	34873830	34873927	chr6:34873830-34873927	3	+	34873830	34873830	8553170	1	97,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	34877461	34888027	chr6:34877461-34888027	3	-	34879638	34887957	8553170	6	1259,111,97,88,149,241,	0,2164,2505,2827,5470,10325,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	34877777	34888089	chr6:34877777-34888089	1	-	34878589	34887957	0	5	943,97,88,149,303,	0,2189,2511,5154,10009,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	34877777	34888071	chr6:34877777-34888071	1	-	34878663	34887957	0	4	943,88,149,285,	0,2511,5154,10009,
#Partially deleted in new
chr6	34889264	35091413	chr6:34889264-35091413	3	+	34889402	35088609	0	24	335,81,157,297,76,102,102,197,93,121,587,67,107,99,153,108,165,126,72,87,138,171,98,2808,	0,77974,80745,92425,93487,93848,94059,95817,99959,105037,128208,164834,170882,189293,190251,190556,191729,193426,193890,194152,194856,196501,197687,199341,
#Partially deleted in new
chr6	34889264	35088963	chr6:34889264-35088963	1	+	34889402	35087071	8553170	25	335,81,157,63,297,76,102,102,197,93,121,587,67,107,99,153,108,165,126,72,87,138,171,99,2012,	0,77974,80745,83316,92425,93487,93848,94059,95817,99959,105037,128208,164834,170882,189293,190251,190556,191729,193426,193890,194152,194856,196501,197005,197687,
#Partially deleted in new
chr6	34889313	34989316	chr6:34889313-34989316	0	+	34889402	34989316	8553170	10	286,81,157,63,297,76,102,102,197,93,	0,77925,80696,83267,92376,93438,93799,94010,95768,99910,
#Deleted in new
chr6	35023521	35023831	chr6:35023521-35023831	7	+	35023521	35023521	16724991	1	310,	0,
#Partially deleted in new
chr6	35058247	35081053	chr6:35058247-35081053	0	+	35058247	35058247	8553170	6	430,107,99,153,108,60,	0,1899,20310,21268,21573,22746,
#Partially deleted in new
chr6	35070870	35071049	chr6:35070870-35071049	7	-	35070870	35070870	16724991	1	179,	0,
#Partially deleted in new
chr6	35118070	35141336	chr6:35118070-35141336	1	-	35118268	35140069	789624	10	431,164,182,218,137,221,121,206,70,132,	0,1157,2088,2358,2838,4046,10991,21949,22744,23134,
#Partially deleted in new
chr6	35118070	35141323	chr6:35118070-35141323	1	-	35118268	35141229	789624	9	431,164,182,218,137,221,121,97,119,	0,1157,2088,2358,2838,4046,10991,18036,23134,
#Partially deleted in new
chr6	35118071	35141647	chr6:35118071-35141647	1	-	35118268	35141229	789624	10	430,164,182,218,137,221,121,112,138,443,	0,1156,2087,2357,2837,4045,10990,18035,22675,23133,
#Partially deleted in new
chr6	35118071	35141349	chr6:35118071-35141349	0	-	35140223	35141229	789624	10	430,164,182,218,137,221,121,206,138,145,	0,1156,2087,2357,2837,4045,10990,21948,22675,23133,
#Deleted in new
chr6	35118071	35121045	chr6:35118071-35121045	0	-	35118268	35121045	789624	5	232,164,182,218,137,	0,1156,2087,2357,2837,
#Partially deleted in new
chr6	35118071	35141253	chr6:35118071-35141253	0	-	35140223	35141229	789624	11	430,164,182,218,137,221,121,112,206,138,49,	0,1156,2087,2357,2837,4045,10990,18035,21948,22675,23133,
#Partially deleted in new
chr6	35118071	35141264	chr6:35118071-35141264	0	-	35140223	35141229	789624	11	430,164,182,218,137,221,121,97,206,138,60,	0,1156,2087,2357,2837,4045,10990,18035,21948,22675,23133,
#Partially deleted in new
chr6	35118073	35141339	chr6:35118073-35141339	1	-	35118268	35141229	789624	10	428,164,182,218,137,221,121,97,138,135,	0,1154,2085,2355,2835,4043,10988,18033,22673,23131,
#Partially deleted in new
chr6	35118076	35141410	chr6:35118076-35141410	3	-	35118268	35140069	789624	10	425,164,182,218,137,221,121,206,138,206,	0,1151,2082,2352,2832,4040,10985,21943,22670,23128,
#Partially deleted in new
chr6	35118076	35141410	chr6:35118076-35141410	1	-	35118268	35136153	789624	11	425,164,182,218,137,221,121,112,206,138,206,	0,1151,2082,2352,2832,4040,10985,18030,21943,22670,23128,
#Partially deleted in new
chr6	35118134	35141371	chr6:35118134-35141371	1	-	35118268	35141229	789624	9	367,164,182,218,137,221,121,112,167,	0,1093,2024,2294,2774,3982,10927,17972,23070,
#Partially deleted in new
chr6	35118268	35148610	chr6:35118268-35148610	1	-	35118268	35136153	789624	9	233,164,182,218,137,221,121,112,187,	0,959,1890,2160,2640,3848,10793,17838,30155,
#Partially deleted in new
chr6	35118268	35141027	chr6:35118268-35141027	1	-	35118268	35140870	789624	9	233,164,182,218,137,221,121,112,281,	0,959,1890,2160,2640,3848,10793,17838,22478,
#Partially deleted in new
chr6	35119239	35141353	chr6:35119239-35141353	0	-	35129075	35141229	789624	7	152,182,218,137,221,121,149,	0,919,1189,1669,2877,9822,21965,
#Partially deleted in new
chr6	35120185	35141310	chr6:35120185-35141310	0	-	35120185	35122271	789624	5	155,218,137,221,106,	0,243,723,1931,21019,
#Partially deleted in new
chr6	35120428	35141339	chr6:35120428-35141339	0	-	35129075	35141229	789624	6	218,137,221,121,138,135,	0,480,1688,8633,20318,20776,
#Partially deleted in new
chr6	35122198	35141353	chr6:35122198-35141353	0	-	35122198	35140069	789624	4	139,121,206,149,	0,6863,17821,19006,
#Partially deleted in new
chr6	35122251	35141336	chr6:35122251-35141336	0	-	35122251	35136153	789624	5	86,121,112,206,132,	0,6810,13855,17768,18953,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	35122285	35141264	chr6:35122285-35141264	0	-	35140212	35141229	789624	7	52,137,121,112,206,70,60,	0,5997,6776,13821,17734,18529,18919,
#Partially deleted in new
chr6	35122296	35141313	chr6:35122296-35141313	0	-	35122296	35136153	789624	5	41,121,97,206,109,	0,6765,13810,17723,18908,
#Partially deleted in new
chr6	35122304	35141311	chr6:35122304-35141311	0	-	35140535	35141229	789624	5	33,206,92,138,107,	0,17715,18201,18442,18900,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	35122308	35141316	chr6:35122308-35141316	0	-	35129075	35141229	789624	4	29,212,121,112,	0,6271,6753,18896,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	35128357	35141313	chr6:35128357-35141313	0	-	35128357	35128357	8553170	5	62,121,112,138,109,	0,704,7749,12389,12847,
#Partially deleted in new
chr6	35128688	35141313	chr6:35128688-35141313	0	-	35128688	35128688	8553170	5	103,121,97,138,109,	0,373,7418,12058,12516,
#Partially deleted in new
chr6	35128704	35141313	chr6:35128704-35141313	0	-	35128704	35128704	8553170	5	87,121,112,138,109,	0,357,7402,12042,12500,
#Partially deleted in new
chr6	35129114	35141311	chr6:35129114-35141311	0	-	35137772	35141229	789624	5	68,112,162,138,107,	0,6992,8576,11632,12090,
#Partially deleted in new
chr6	35136126	35141027	chr6:35136126-35141027	0	-	35140223	35140870	789624	3	92,206,281,	0,3893,4620,
#Partially deleted in new
chr6	35137745	35141311	chr6:35137745-35141311	0	-	35140223	35141229	789624	4	107,206,138,107,	0,2274,3001,3459,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr6	35214418	35253079	chr6:35214418-35253079	3	+	35214418	35248705	789624	22	85,123,126,135,126,117,117,123,117,126,117,105,117,159,216,162,168,162,198,153,80,4524,	0,13161,14195,17306,18431,18766,23483,25333,25955,26722,27124,27387,27785,28203,28602,29175,29544,30231,30809,31525,31787,34137,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	35220369	35224630	chr6:35220369-35224630	3	-	35220369	35220369	8553170	1	4261,	0,
#Partially deleted in new
chr6	35258908	35288315	chr6:35258908-35288315	0	+	35258908	35258908	8553170	5	478,169,81,78,670,	0,22147,27219,27413,28737,
#Partially deleted in new
chr6	35258981	35295983	chr6:35258981-35295983	0	+	35281151	35290276	789624	11	405,169,81,78,200,130,763,180,248,164,2233,	0,22074,27146,27340,28664,31271,31659,32576,33558,33899,34769,
#Partially deleted in new
chr6	35259470	35292642	chr6:35259470-35292642	0	+	35281151	35292642	789624	10	257,169,81,78,200,117,76,126,180,89,	0,21585,26657,26851,28175,30795,31170,31807,32087,33083,
#Partially deleted in new
chr6	35259497	35292134	chr6:35259497-35292134	0	+	35259497	35259497	8553170	9	230,169,81,78,200,117,76,126,577,	0,21558,26630,26824,28148,30768,31143,31780,32060,
#Partially deleted in new
chr6	35259527	35286782	chr6:35259527-35286782	0	+	35259527	35259527	8553170	3	200,169,655,	0,21528,26600,
#Partially deleted in new
chr6	35259603	35287777	chr6:35259603-35287777	0	+	35259603	35259603	8553170	4	124,169,272,132,	0,21452,26524,28042,
#Partially deleted in new
chr6	35259671	35295985	chr6:35259671-35295985	3	+	35281151	35295248	789624	14	170,169,81,78,200,117,76,126,180,234,164,165,114,842,	0,21384,26456,26650,27974,30594,30969,31606,31886,32882,33209,34079,34784,35472,
#Partially deleted in new
chr6	35259773	35295983	chr6:35259773-35295983	1	+	35281151	35295248	789624	13	68,169,81,78,200,117,76,126,180,234,164,114,840,	0,21282,26354,26548,27872,30492,30867,31504,31784,32780,33107,34682,35370,
#Partially deleted in new
chr6	35270411	35281105	chr6:35270411-35281105	0	+	35270411	35270411	8553170	2	112,50,	0,10644,
#Partially deleted in new
chr6	35279176	35279819	chr6:35279176-35279819	7	-	35279176	35279176	16724991	2	240,88,	0,555,
#Deleted in new
chr6	35292322	35294552	chr6:35292322-35294552	0	+	35292322	35292322	8553170	4	465,164,165,97,	0,558,1428,2133,
#Deleted in new
chr6	35293823	35294976	chr6:35293823-35294976	0	+	35293823	35294668	789624	2	92,521,	0,632,
#Partially deleted in new
chr6	35297851	35321771	chr6:35297851-35321771	3	+	35297856	35321410	789624	11	101,141,186,237,147,109,299,167,199,91,585,	0,11818,12607,14450,14774,20039,20321,21672,21967,23032,23335,
#Deleted in new
chr6	35309737	35312538	chr6:35309737-35312538	0	+	35309737	35312538	789624	3	73,75,237,	0,832,2564,
#Deleted in new
chr6	35317607	35318230	chr6:35317607-35318230	0	+	35317607	35317607	8553170	2	392,58,	0,565,
#Partially deleted in new
chr6	35342557	35428191	chr6:35342557-35428191	3	+	35411087	35426079	0	8	124,84,231,155,139,203,451,2360,	0,4509,68429,77569,79262,81388,81771,83274,
#Partially deleted in new
chr6	35342557	35428191	chr6:35342557-35428191	1	+	35411087	35426079	0	6	124,84,231,203,451,2360,	0,4509,68429,81388,81771,83274,
#Partially deleted in new
chr6	35342557	35428191	chr6:35342557-35428191	1	+	35347137	35426079	0	7	124,84,155,139,203,451,2360,	0,4509,77569,79262,81388,81771,83274,
#Partially deleted in new
chr6	35342613	35428178	chr6:35342613-35428178	1	+	35411087	35426079	0	9	68,84,96,231,155,139,203,451,2347,	0,4453,54884,68373,77513,79206,81332,81715,83218,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	35342613	35425393	chr6:35342613-35425393	1	+	35411087	35424787	0	8	68,84,96,231,155,139,203,1065,	0,4453,54884,68373,77513,79206,81332,81715,
#Partially deleted in new
chr6	35443043	35449847	chr6:35443043-35449847	7	+	35443043	35443043	16724991	5	129,245,164,111,82,	0,314,3167,3435,6722,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	35452355	35466961	chr6:35452355-35466961	0	+	35452545	35463850	8553170	11	438,607,45,69,144,124,79,67,126,133,718,	0,3391,5200,5560,5941,6975,7326,8196,10433,11492,13888,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	35452360	35467103	chr6:35452360-35467103	3	+	35452545	35466345	0	10	433,607,45,69,144,124,79,67,126,860,	0,3386,5195,5555,5936,6970,7321,8191,10428,13883,
#Partially deleted in new
chr6	35468407	35470785	chr6:35468407-35470785	3	+	35468434	35470750	0	6	32,75,81,149,173,206,	0,391,539,973,1771,2172,
#Partially deleted in new
chr6	35468407	35470785	chr6:35468407-35470785	0	+	35468407	35468407	8553170	5	32,75,583,173,206,	0,391,539,1771,2172,
#Partially deleted in new
chr6	35468419	35470785	chr6:35468419-35470785	0	+	35468419	35468419	8553170	5	454,81,149,173,206,	0,527,961,1759,2160,
#Partially deleted in new
chr6	35468419	35470785	chr6:35468419-35470785	0	+	35468419	35468419	8553170	6	20,75,339,149,173,206,	0,379,527,961,1759,2160,
#Partially deleted in new
chr6	35468419	35470640	chr6:35468419-35470640	0	+	35468419	35468419	8553170	5	20,229,149,173,61,	0,379,961,1759,2160,
#Deleted in new
chr6	35470507	35470579	chr6:35470507-35470579	3	+	35470507	35470507	5263520	1	72,	0,
#Partially deleted in new
chr6	35473596	35497076	chr6:35473596-35497076	3	-	35475043	35486662	789624	13	1561,153,141,174,134,62,50,138,12,63,65,251,179,	0,1739,1969,2322,2705,3714,4678,4837,5708,6715,10963,12864,23301,
#Partially deleted in new
chr6	35473596	35496950	chr6:35473596-35496950	0	-	35476428	35486662	789624	11	1561,153,141,174,134,62,50,138,12,251,53,	0,1739,1969,2322,2705,3714,4678,4837,5708,12864,23301,
#Partially deleted in new
chr6	35474891	35497064	chr6:35474891-35497064	1	-	35475043	35486662	789624	13	266,153,141,174,134,62,50,138,12,63,65,251,167,	0,444,674,1027,1410,2419,3383,3542,4413,5168,9668,11569,22006,
#Partially deleted in new
chr6	35497873	35512938	chr6:35497873-35512938	3	-	35498326	35512858	0	15	587,172,99,112,113,171,6,104,117,102,150,159,91,52,127,	0,2107,5685,5863,7867,8129,8400,11335,11760,11953,12987,13774,14306,14765,14938,
#Partially deleted in new
chr6	35497873	35512876	chr6:35497873-35512876	1	-	35498326	35512858	0	14	587,172,99,112,113,171,6,104,117,102,150,91,52,65,	0,2107,5685,5863,7867,8129,8400,11335,11760,11953,12987,14306,14765,14938,
#Partially deleted in new
chr6	35497876	35512869	chr6:35497876-35512869	1	-	35498326	35512858	789624	14	584,172,99,112,113,171,104,117,102,150,159,91,52,58,	0,2104,5682,5860,7864,8126,11332,11757,11950,12984,13771,14303,14762,14935,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	35500069	35504136	chr6:35500069-35504136	0	-	35500069	35500069	8553170	3	83,99,400,	0,3489,3667,
#Partially deleted in new
chr6	35503385	35506018	chr6:35503385-35506018	0	-	35503385	35503385	8553170	4	272,112,113,16,	0,351,2355,2617,
#Partially deleted in new
chr6	35503750	35511967	chr6:35503750-35511967	0	-	35503750	35503750	8553170	6	98,113,171,6,104,320,	0,1990,2252,2523,5458,7897,
#Partially deleted in new
chr6	35509723	35512866	chr6:35509723-35512866	0	-	35509723	35512858	789624	6	27,102,165,91,52,55,	0,103,1137,2456,2915,3088,
#Deleted in new
chr6	35510705	35512274	chr6:35510705-35512274	0	-	35510705	35510705	8553170	3	305,159,95,	0,942,1474,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	35544631	35545669	chr6:35544631-35545669	3	+	35544631	35544631	8553170	3	74,66,455,	0,236,583,
#Deleted in new
chr6	35555872	35556264	chr6:35555872-35556264	7	+	35555872	35555872	16724991	1	392,	0,
#Partially deleted in new
chr6	35573584	35728583	chr6:35573584-35728583	3	-	35575834	35642824	0	12	2358,240,186,84,91,157,115,143,145,124,221,76,	0,3409,6451,13449,17545,23663,45511,46547,63429,69135,146743,154923,
#Partially deleted in new
chr6	35573584	35688915	chr6:35573584-35688915	1	-	35575834	35642824	0	11	2358,240,186,84,91,157,115,143,145,124,184,	0,3409,6451,13449,17545,23663,45511,46547,63429,69135,115147,
#Partially deleted in new
chr6	35573589	35688937	chr6:35573589-35688937	1	-	35575834	35642824	0	11	2353,240,186,84,91,157,115,143,145,124,134,	0,3404,6446,13444,17540,23658,45506,46542,63424,69130,115214,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	35580556	35688942	chr6:35580556-35688942	1	-	35586975	35642824	0	7	6561,157,115,143,145,124,139,	0,16691,38539,39575,56457,62163,108247,
#Deleted in new
chr6	35607627	35607934	chr6:35607627-35607934	7	+	35607627	35607627	16724991	1	307,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	35651817	35651945	chr6:35651817-35651945	3	+	35651817	35651817	8553170	1	128,	0,
#Deleted in new
chr6	35664716	35664789	chr6:35664716-35664789	3	-	35664716	35664716	5263520	1	73,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	35733866	35736947	chr6:35733866-35736947	3	-	35733866	35733866	8553170	4	161,285,116,107,	0,1213,1896,2974,
#Partially deleted in new
chr6	35737031	35748911	chr6:35737031-35748911	1	+	35737108	35748870	789624	6	240,146,135,174,72,344,	0,995,1352,10229,10544,11536,
#Partially deleted in new
chr6	35737081	35748908	chr6:35737081-35748908	3	+	35737108	35748870	789624	6	271,146,135,174,72,371,	0,945,1302,10179,10494,11456,
#Partially deleted in new
chr6	35737086	35749079	chr6:35737086-35749079	1	+	35737108	35748870	789624	6	185,146,135,174,72,542,	0,940,1297,10174,10489,11451,
#Deleted in new
chr6	35737091	35738509	chr6:35737091-35738509	0	+	35737108	35738003	789624	3	180,174,126,	0,907,1292,
#Partially deleted in new
chr6	35765907	35766927	chr6:35765907-35766927	7	+	35765907	35765907	16724991	2	399,229,	0,791,
#Partially deleted in new
chr6	35776593	35779552	chr6:35776593-35779552	0	+	35776593	35776593	789624	3	211,123,198,	0,865,2761,
#Partially deleted in new
chr6	35776614	35779552	chr6:35776614-35779552	1	+	35776618	35779530	789624	4	88,123,79,198,	0,844,1236,2740,
#Partially deleted in new
chr6	35776618	35779552	chr6:35776618-35779552	3	+	35776618	35779450	789624	3	84,123,198,	0,840,2736,
#Partially deleted in new
chr6	35776689	35779552	chr6:35776689-35779552	0	+	35776689	35776689	789624	2	115,198,	0,2665,
#Partially deleted in new
chr6	35781016	35788152	chr6:35781016-35788152	3	+	35781110	35788010	789624	3	193,123,286,	0,5981,6850,
#Partially deleted in new
chr6	35787039	35793675	chr6:35787039-35793675	0	+	35787039	35793535	789624	2	81,188,	0,6448,
#Partially deleted in new
chr6	35794981	35797311	chr6:35794981-35797311	3	-	35795145	35797288	789624	3	296,123,107,	0,749,2223,
#Partially deleted in new
chr6	35794981	35797344	chr6:35794981-35797344	1	-	35795145	35797288	789624	2	296,140,	0,2223,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	35805292	35824075	chr6:35805292-35824075	3	+	35805670	35819447	789624	4	790,237,27,1094,	0,9253,14144,17689,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	35805397	35824075	chr6:35805397-35824075	1	+	35805670	35819447	789624	4	685,237,27,1094,	0,9148,14039,17584,
#Partially deleted in new
chr6	35832965	35921342	chr6:35832965-35921342	3	-	35835303	35921056	0	16	2523,93,70,108,101,420,214,26,166,107,88,88,109,119,61,299,	0,5371,9569,24295,36044,36516,37315,37968,39597,41267,53758,55058,55849,57929,87502,88078,
#Partially deleted in new
chr6	35833033	35921065	chr6:35833033-35921065	0	-	35833033	35833033	8553170	15	2455,93,70,108,101,420,214,26,166,107,88,88,109,119,598,	0,5303,9501,24227,35976,36448,37247,37900,39529,41199,53690,54990,55781,57861,87434,
#Partially deleted in new
chr6	35833033	35921047	chr6:35833033-35921047	0	-	35835303	35921047	789624	16	2455,93,70,108,101,420,214,26,166,107,88,88,109,119,61,61,	0,5303,9501,24227,35976,36448,37247,37900,39529,41199,53690,54990,55781,57861,87434,87953,
#Partially deleted in new
chr6	35833033	35921147	chr6:35833033-35921147	1	-	35835303	35891039	0	16	2455,93,70,108,101,420,214,26,166,107,88,88,109,147,61,104,	0,5303,9501,24227,35976,36448,37247,37900,39529,41199,53690,54990,55781,57861,87434,88010,
#Partially deleted in new
chr6	35835427	35838841	chr6:35835427-35838841	0	-	35835427	35835427	8553170	2	61,505,	0,2909,
#Partially deleted in new
chr6	35856933	35869551	chr6:35856933-35869551	0	-	35869079	35869551	789624	3	435,129,70,	0,12076,12548,
#Deleted in new
chr6	35869588	35870990	chr6:35869588-35870990	0	-	35869588	35869588	8553170	2	313,57,	0,1345,
#Partially deleted in new
chr6	35869666	35921128	chr6:35869666-35921128	0	-	35869666	35870485	789624	5	235,214,26,61,85,	0,614,1267,50801,51377,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	35874239	35895719	chr6:35874239-35895719	0	-	35874239	35874239	8553170	6	100,88,88,109,119,61,	0,12484,13784,14575,16655,21419,
#Partially deleted in new
chr6	35887824	35921101	chr6:35887824-35921101	0	-	35887824	35887824	8553170	5	287,109,119,61,58,	0,990,3070,32643,33219,
#Partially deleted in new
chr6	35890948	35921095	chr6:35890948-35921095	0	-	35890948	35920354	789624	3	65,464,52,	0,29116,30095,
#Partially deleted in new
chr6	35943513	36024855	chr6:35943513-36024855	3	-	35943899	36019707	789624	20	827,185,55,369,132,93,70,107,96,78,114,148,83,150,165,182,117,140,190,352,	0,7649,7931,11638,15946,16200,17329,17479,19012,25363,31861,33690,38607,48145,48996,54224,56478,68719,76006,80990,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	35943517	35969822	chr6:35943517-35969822	0	-	35943517	35943517	8553170	10	823,185,55,369,132,93,70,107,96,946,	0,7645,7927,11634,15942,16196,17325,17475,19008,25359,
#Partially deleted in new
chr6	35943519	36024493	chr6:35943519-36024493	1	-	35943899	36019707	789624	18	821,185,55,369,132,93,70,107,96,78,114,148,83,182,117,140,190,164,	0,7643,7925,11632,15940,16194,17323,17473,19006,25357,31855,33684,38601,54218,56472,68713,76000,80810,
#Partially deleted in new
chr6	35943520	36024588	chr6:35943520-36024588	1	-	35943899	36019707	789624	20	820,185,55,369,132,93,70,107,96,78,114,148,83,150,165,182,117,140,190,169,	0,7642,7924,11631,15939,16193,17322,17472,19005,25356,31854,33683,38600,48138,48989,54217,56471,68712,75999,80899,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	35943694	35968895	chr6:35943694-35968895	0	-	35955076	35968895	789624	10	646,185,55,701,132,93,70,107,96,19,	0,7468,7750,11125,15765,16019,17148,17298,18831,25182,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	35959926	36024856	chr6:35959926-36024856	0	-	35959926	35959926	8553170	13	1173,96,78,114,148,83,150,165,182,117,140,190,353,	0,2599,8950,15448,17277,22194,31732,32583,37811,40065,52306,59593,64577,
#Partially deleted in new
chr6	35989514	35990436	chr6:35989514-35990436	5	-	35989514	35989514	16724991	2	388,169,	0,753,
#Partially deleted in new
chr6	35997837	36024780	chr6:35997837-36024780	0	-	36000095	36024780	789624	6	82,117,87,190,220,44,	0,2154,14395,21682,26582,26899,
#Partially deleted in new
chr6	36012248	36024868	chr6:36012248-36024868	0	-	36012248	36024856	789624	4	124,190,136,132,	0,7271,12255,12488,
#Partially deleted in new
chr6	36027676	36075847	chr6:36027676-36075847	1	+	36028157	36075847	789624	7	597,130,59,112,30,48,27,	0,25022,31612,45196,46014,46372,48144,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	36027710	36111236	chr6:36027710-36111236	1	+	36028157	36108447	0	12	563,130,59,112,30,48,115,72,80,79,174,2857,	0,24988,31578,45162,45980,46338,48137,48826,72477,74860,79744,80669,
#Partially deleted in new
chr6	36027769	36110755	chr6:36027769-36110755	3	+	36028157	36108447	0	12	504,130,59,112,30,48,115,72,80,79,174,2376,	0,24929,31519,45103,45921,46279,48078,48767,68217,74801,79685,80610,
#Partially deleted in new
chr6	36027781	36108670	chr6:36027781-36108670	1	+	36052813	36108447	789624	13	103,83,130,59,112,30,48,115,72,80,79,174,291,	0,409,24917,31507,45091,45909,46267,48066,48755,68205,74789,79673,80598,
#Partially deleted in new
chr6	36028157	36108509	chr6:36028157-36108509	1	+	36028157	36107616	0	11	116,130,59,112,30,48,115,72,80,174,130,	0,24541,31131,44715,45533,45891,47690,48379,67829,79297,80222,
#Partially deleted in new
chr6	36028157	36098054	chr6:36028157-36098054	0	+	36028157	36075847	789624	9	116,130,59,112,30,48,142,72,2068,	0,24541,31131,44715,45533,45891,47663,48379,67829,
#Partially deleted in new
chr6	36028157	36098054	chr6:36028157-36098054	0	+	36028157	36028157	8553170	9	116,130,59,112,30,48,115,72,2068,	0,24541,31131,44715,45533,45891,47690,48379,67829,
#Partially deleted in new
chr6	36028198	36107529	chr6:36028198-36107529	0	+	36028198	36073052	789624	11	75,130,59,60,30,48,115,72,80,79,75,	0,24500,31090,44847,45492,45850,47649,48338,67788,74372,79256,
#Partially deleted in new
chr6	36029088	36076555	chr6:36029088-36076555	0	+	36052813	36076555	789624	8	72,130,59,112,30,48,115,19,	0,23610,30200,43784,44602,44960,46759,47448,
#Deleted in new
chr6	36075864	36076888	chr6:36075864-36076888	0	+	36075864	36075864	8553170	2	98,352,	0,672,
#Deleted in new
chr6	36091990	36092646	chr6:36091990-36092646	7	-	36091990	36091990	16724991	1	656,	0,
#Partially deleted in new
chr6	36127808	36135832	chr6:36127808-36135832	0	+	36127808	36127808	8553170	5	147,83,130,59,80,	0,2810,3462,4812,7944,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	36130320	36140065	chr6:36130320-36140065	3	+	36130582	36139373	0	12	381,130,59,109,30,48,115,72,80,79,177,772,	0,950,2300,5432,5698,6163,6335,6558,8044,8381,8558,8973,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	36130483	36144524	chr6:36130483-36144524	1	+	36130582	36138963	0	10	218,130,59,109,30,48,115,79,177,5231,	0,787,2137,5269,5535,6000,6172,8218,8395,8810,
#Partially deleted in new
chr6	36130662	36139207	chr6:36130662-36139207	1	+	36131385	36138784	789624	8	39,130,59,109,30,48,115,506,	0,608,1958,5090,5356,5821,5993,8039,
#Partially deleted in new
chr6	36130868	36136515	chr6:36130868-36136515	0	+	36130868	36130868	8553170	6	289,130,59,109,30,32,	0,402,1752,4884,5150,5615,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	36146697	36197203	chr6:36146697-36197203	2	-	36146697	36146697	8553170	4	233,91,134,129,	0,32919,49339,50377,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	36158067	36197205	chr6:36158067-36197205	1	-	36158067	36158067	8553170	4	874,91,134,131,	0,21549,37969,39007,
#Partially deleted in new
chr6	36196743	36232790	chr6:36196743-36232790	3	+	36200322	36230609	0	13	227,1474,157,132,129,313,303,507,94,98,98,155,2365,	0,3553,7914,10569,13043,13472,14514,17136,21173,25424,28523,32158,33682,
#Partially deleted in new
chr6	36196965	36232590	chr6:36196965-36232590	1	+	36200322	36230609	0	11	5,1474,157,132,129,313,94,98,98,155,2165,	0,3331,7692,10347,12821,13250,20951,25202,28301,31936,33460,
#Partially deleted in new
chr6	36196965	36232590	chr6:36196965-36232590	0	+	36200322	36228902	789624	11	5,1474,157,132,129,313,94,98,94,155,2165,	0,3331,7692,10347,12821,13250,20951,25202,28305,31936,33460,
#Partially deleted in new
chr6	36196965	36232590	chr6:36196965-36232590	1	+	36200322	36230609	0	9	5,1474,157,132,129,313,98,155,2165,	0,3331,7692,10347,12821,13250,28301,31936,33460,
#Partially deleted in new
chr6	36197395	36200608	chr6:36197395-36200608	0	+	36200322	36200608	789624	2	102,312,	0,2901,
#Partially deleted in new
chr6	36197451	36200709	chr6:36197451-36200709	0	+	36200322	36200709	789624	2	169,413,	0,2845,
#Partially deleted in new
chr6	36200296	36231317	chr6:36200296-36231317	0	+	36200322	36210215	789624	9	1474,157,132,129,328,303,507,155,892,	0,4361,7016,9490,9904,10961,13583,28605,30129,
#Partially deleted in new
chr6	36200296	36231317	chr6:36200296-36231317	1	+	36200322	36229041	789624	11	1474,157,132,129,313,303,507,94,98,155,892,	0,4361,7016,9490,9919,10961,13583,17620,21871,28605,30129,
#Partially deleted in new
chr6	36200405	36232790	chr6:36200405-36232790	0	+	36200405	36210215	789624	9	1365,157,132,129,328,303,507,94,2365,	0,4252,6907,9381,9795,10852,13474,17511,30020,
#Partially deleted in new
chr6	36204413	36207348	chr6:36204413-36207348	0	+	36204571	36207348	789624	2	401,36,	0,2899,
#Partially deleted in new
chr6	36211200	36214066	chr6:36211200-36214066	0	+	36211200	36211200	8553170	2	360,207,	0,2659,
#Partially deleted in new
chr6	36211447	36232787	chr6:36211447-36232787	0	+	36211447	36225291	789624	6	113,507,94,98,155,2362,	0,2432,6469,13819,17454,18978,
#Partially deleted in new
chr6	36243202	36307754	chr6:36243202-36307754	1	+	36291399	36307716	789624	8	59,233,66,237,61,609,85,168,	0,48117,49858,50960,52161,58658,63089,64384,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	36243202	36308595	chr6:36243202-36308595	1	+	36291399	36307716	789624	8	59,233,66,210,61,609,85,1009,	0,48117,49858,50987,52161,58658,63089,64384,
#Partially deleted in new
chr6	36270459	36307716	chr6:36270459-36307716	2	+	36270459	36307716	789624	8	205,233,66,210,61,609,85,130,	0,20860,22601,23730,24904,31401,35832,37127,
#Partially deleted in new
chr6	36270459	36307716	chr6:36270459-36307716	0	+	36270459	36307716	789624	8	205,236,66,210,61,609,85,130,	0,20860,22601,23730,24904,31401,35832,37127,
#Partially deleted in new
chr6	36291389	36312229	chr6:36291389-36312229	0	+	36291389	36311886	789624	8	163,66,210,61,609,85,126,467,	0,1671,2800,3974,10471,14902,16197,20373,
#Partially deleted in new
chr6	36315756	36336885	chr6:36315756-36336885	3	-	36317355	36330690	789624	12	1635,255,65,132,241,62,132,244,65,117,614,174,	0,3599,5398,6554,7536,8372,9526,10753,11273,12841,14324,20955,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	36354090	36387566	chr6:36354090-36387566	1	-	36354641	36387541	789624	8	597,101,143,231,126,165,136,31,	0,12784,14838,17239,19362,21780,31443,33445,
#Partially deleted in new
chr6	36366193	36387783	chr6:36366193-36387783	1	-	36366644	36387541	789624	8	569,101,143,231,126,165,136,248,	0,681,2735,5136,7259,9677,19340,21342,
#Partially deleted in new
chr6	36366193	36387783	chr6:36366193-36387783	1	-	36366644	36387541	789624	7	569,101,143,126,165,136,248,	0,681,2735,7259,9677,19340,21342,
#Partially deleted in new
chr6	36366194	36387800	chr6:36366194-36387800	1	-	36366644	36387541	789624	7	568,101,143,231,126,136,265,	0,680,2734,5135,7258,19339,21341,
#Partially deleted in new
chr6	36366194	36387800	chr6:36366194-36387800	3	-	36366644	36371540	789624	6	568,101,143,231,126,265,	0,680,2734,5135,7258,21341,
#Partially deleted in new
chr6	36366194	36387800	chr6:36366194-36387800	1	-	36366644	36375959	789624	8	568,101,143,231,126,206,136,265,	0,680,2734,5135,7258,9635,19339,21341,
#Partially deleted in new
chr6	36366194	36387800	chr6:36366194-36387800	1	-	36366644	36375934	789624	7	568,101,143,231,126,165,265,	0,680,2734,5135,7258,9676,21341,
#Partially deleted in new
chr6	36386830	36391994	chr6:36386830-36391994	3	+	36386830	36386830	8553170	2	100,219,	0,4945,
#Partially deleted in new
chr6	36390550	36442889	chr6:36390550-36442889	3	-	36391769	36426082	789624	5	1324,131,178,120,355,	0,9903,35363,48216,51984,
#Partially deleted in new
chr6	36391000	36400524	chr6:36391000-36400524	1	-	36391769	36400504	789624	3	440,108,71,	0,766,9453,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	36442766	36491143	chr6:36442766-36491143	3	+	36470097	36487175	789624	8	345,206,274,103,121,198,111,4261,	0,27285,32022,36354,36824,38795,41947,44116,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	36442766	36491143	chr6:36442766-36491143	1	+	36479121	36487175	789624	7	345,206,103,121,198,111,4261,	0,27285,36354,36824,38795,41947,44116,
#Partially deleted in new
chr6	36443006	36474957	chr6:36443006-36474957	0	+	36470097	36474957	789624	4	105,98,206,169,	0,22594,27045,31782,
#Deleted in new
chr6	36443011	36443723	chr6:36443011-36443723	0	+	36443011	36443011	8553170	2	100,306,	0,406,
#Partially deleted in new
chr6	36443016	36488096	chr6:36443016-36488096	0	+	36443016	36443016	8553170	4	95,198,111,1214,	0,38545,41697,43866,
#Partially deleted in new
chr6	36443016	36474921	chr6:36443016-36474921	0	+	36470097	36474921	789624	4	95,113,206,133,	0,401,27035,31772,
#Partially deleted in new
chr6	36443020	36487667	chr6:36443020-36487667	0	+	36470097	36481577	789624	6	91,206,103,198,111,785,	0,27031,36100,38541,41693,43862,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	36443027	36490377	chr6:36443027-36490377	1	+	36470097	36487175	789624	5	84,206,198,111,3495,	0,27024,38534,41686,43855,
#Partially deleted in new
chr6	36443035	36487406	chr6:36443035-36487406	0	+	36470097	36479711	789624	7	76,206,103,121,198,111,524,	0,27016,36085,36555,38526,41678,43847,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	36443037	36474889	chr6:36443037-36474889	0	+	36470097	36474889	789624	5	74,99,117,206,101,	0,8496,9526,27014,31751,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	36450911	36451201	chr6:36450911-36451201	3	-	36450911	36450911	8553170	1	290,	0,
#Partially deleted in new
chr6	36493891	36547470	chr6:36493891-36547470	3	-	36495783	36540202	0	14	2023,95,96,124,118,62,103,155,124,84,123,52,136,281,	0,2819,3888,4471,5981,12691,13608,21446,23825,27842,30449,31699,46180,53298,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	36522190	36522501	chr6:36522190-36522501	3	+	36522190	36522190	8553170	1	311,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	36594366	36597189	chr6:36594366-36597189	0	+	36594366	36594366	8553170	2	115,429,	0,2394,
#Partially deleted in new
chr6	36594367	36600881	chr6:36594367-36600881	0	+	36594367	36594367	8553170	4	114,208,135,1061,	0,2393,4481,5453,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	36594367	36605600	chr6:36594367-36605600	3	+	36596762	36601989	0	6	114,208,135,39,87,3639,	0,2393,4481,6784,7340,7594,
#Partially deleted in new
chr6	36594390	36602040	chr6:36594390-36602040	0	+	36596762	36599854	0	7	91,208,135,456,39,87,79,	0,2370,4458,5430,6761,7317,7571,
#Partially deleted in new
chr6	36594591	36602197	chr6:36594591-36602197	1	+	36596762	36601989	0	6	164,208,135,39,87,236,	0,2169,4257,6560,7116,7370,
#Partially deleted in new
chr6	36599437	36602776	chr6:36599437-36602776	0	+	36599437	36599437	8553170	3	1753,87,815,	0,2270,2524,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	36600402	36602778	chr6:36600402-36602778	0	+	36600402	36600402	8553170	1	2376,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	36622435	36622512	chr6:36622435-36622512	3	-	36622435	36622435	5263520	1	77,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	36639544	36639672	chr6:36639544-36639672	3	-	36639544	36639544	8553170	1	128,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	36672837	36672944	chr6:36672837-36672944	3	+	36672837	36672837	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	36673620	36675126	chr6:36673620-36675126	3	-	36673620	36673620	789624	1	1506,	0,
#Partially deleted in new
chr6	36673816	36675270	chr6:36673816-36675270	7	+	36673816	36673816	16724991	1	1454,	0,
#Partially deleted in new
chr6	36676459	36687337	chr6:36676459-36687337	3	+	36684101	36685800	0	3	65,450,1587,	0,7637,9291,
#Partially deleted in new
chr6	36676489	36687337	chr6:36676489-36687337	1	+	36684101	36685800	0	4	35,32,450,1587,	0,1412,7607,9261,
#Partially deleted in new
chr6	36676527	36684511	chr6:36676527-36684511	0	+	36676527	36676527	8553170	3	43,146,415,	0,1260,7569,
#Deleted in new
chr6	36677608	36678559	chr6:36677608-36678559	3	-	36677608	36677608	789624	1	951,	0,
#Partially deleted in new
chr6	36678657	36687339	chr6:36678657-36687339	1	+	36684101	36685800	0	3	141,450,1589,	0,5439,7093,
#Partially deleted in new
chr6	36678709	36687337	chr6:36678709-36687337	1	+	36684101	36685800	0	3	230,450,1587,	0,5387,7041,
#Partially deleted in new
chr6	36678720	36685924	chr6:36678720-36685924	1	+	36684101	36685800	0	4	78,91,450,174,	0,3919,5376,7030,
#Partially deleted in new
chr6	36678725	36684498	chr6:36678725-36684498	0	+	36678725	36678725	8553170	2	214,402,	0,5371,
#Deleted in new
chr6	36678770	36680857	chr6:36678770-36680857	0	+	36678770	36678770	8553170	2	169,384,	0,1703,
#Partially deleted in new
chr6	36697809	36733183	chr6:36697809-36733183	3	+	36704235	36732093	789624	14	106,219,112,175,147,91,96,188,1583,82,115,102,77,1181,	0,6414,16018,17669,19463,20218,20683,22553,23341,28052,29767,30890,32863,34193,
#Deleted in new
chr6	36737049	36737986	chr6:36737049-36737986	7	+	36737049	36737049	16724991	1	937,	0,
#Partially deleted in new
chr6	36740774	36757381	chr6:36740774-36757381	0	-	36740774	36740774	8553170	11	1712,74,58,103,128,182,47,41,62,54,97,	0,2914,3493,4273,4613,5621,7446,11805,12259,15470,16510,
#Partially deleted in new
chr6	36740777	36840002	chr6:36740777-36840002	3	-	36742267	36839377	789624	21	1709,74,58,103,128,182,47,62,54,76,42,105,104,64,60,77,40,104,47,41,720,	0,2911,3490,4270,4610,5618,7443,12256,15467,22139,24557,34183,38076,51255,53812,57387,57677,59189,81336,82280,98505,
#Partially deleted in new
chr6	36740777	36757409	chr6:36740777-36757409	1	-	36742267	36756277	789624	10	1709,74,58,103,128,182,47,62,54,125,	0,2911,3490,4270,4610,5618,7443,12256,15467,16507,
#Partially deleted in new
chr6	36742372	36757381	chr6:36742372-36757381	0	-	36742372	36742372	8553170	9	114,74,58,103,128,182,47,54,97,	0,1316,1895,2675,3015,4023,5848,13872,14912,
#Partially deleted in new
chr6	36743688	36757389	chr6:36743688-36757389	0	-	36743688	36743688	8553170	8	74,259,103,128,182,47,54,105,	0,579,1359,1699,2707,4532,12556,13596,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	36754232	36757400	chr6:36754232-36757400	0	-	36754232	36754232	8553170	2	2066,116,	0,3052,
#Partially deleted in new
chr6	36756286	36839329	chr6:36756286-36839329	0	-	36756286	36839329	789624	14	12,76,42,105,104,64,51,60,77,40,104,47,41,47,	0,6630,9048,18674,22567,35746,36109,38303,41878,42168,43680,65827,66771,82996,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	36768484	36774651	chr6:36768484-36774651	3	+	36768484	36768484	8553170	2	1443,201,	0,5966,
#Partially deleted in new
chr6	36778855	36839444	chr6:36778855-36839444	0	-	36778855	36839377	789624	10	102,64,48,60,77,40,104,47,41,162,	0,13177,13540,15734,19309,19599,21111,43258,44202,60427,
#Partially deleted in new
chr6	36854826	36875024	chr6:36854826-36875024	3	-	36855812	36874772	0	4	1207,69,155,308,	0,1759,16891,19890,
#Partially deleted in new
chr6	36854826	36858635	chr6:36854826-36858635	0	-	36854826	36854826	8553170	3	1207,69,71,	0,1759,3738,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	36885853	36928964	chr6:36885853-36928964	1	+	36899444	36923441	789624	9	175,100,208,214,152,140,130,124,5618,	0,8650,13572,16367,28430,28700,30591,33724,37493,
#Partially deleted in new
chr6	36885863	36923522	chr6:36885863-36923522	3	+	36886026	36923441	789624	8	165,208,214,152,140,130,124,176,	0,13562,16357,28420,28690,30581,33714,37483,
#Partially deleted in new
chr6	36885863	36923522	chr6:36885863-36923522	1	+	36899444	36923441	789624	9	165,91,208,214,152,140,130,124,176,	0,6902,13562,16357,28420,28690,30581,33714,37483,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	36940070	36944675	chr6:36940070-36944675	3	-	36940070	36940070	8553170	2	293,204,	0,4401,
#Partially deleted in new
chr6	36948262	36964835	chr6:36948262-36964835	3	+	36954760	36963944	789624	8	142,252,222,110,89,678,140,450,	0,6417,10882,13188,13623,14672,15560,16123,
#Partially deleted in new
chr6	36954432	36964837	chr6:36954432-36964837	1	+	36954760	36963944	789624	7	499,222,110,89,678,140,452,	0,4712,7018,7453,8502,9390,9953,
#Deleted in new
chr6	36962989	36964667	chr6:36962989-36964667	0	+	36962989	36962989	8553170	3	44,140,282,	0,833,1396,
#Partially deleted in new
chr6	36968140	36986298	chr6:36968140-36986298	3	-	36968902	36986173	789624	12	834,76,68,48,94,60,52,58,78,107,85,446,	0,1898,2265,2506,4562,7517,9058,9493,9937,10364,13447,17712,
#Partially deleted in new
chr6	36968140	36986298	chr6:36968140-36986298	1	-	36968902	36986173	789624	12	834,76,68,48,145,60,52,58,78,107,85,446,	0,1898,2265,2506,4511,7517,9058,9493,9937,10364,13447,17712,
#Deleted in new
chr6	36968759	36970916	chr6:36968759-36970916	0	-	36968759	36968759	8553170	4	215,76,68,270,	0,1279,1646,1887,
#Partially deleted in new
chr6	36968911	36977673	chr6:36968911-36977673	0	-	36968911	36977673	789624	9	63,76,68,48,94,60,101,52,40,	0,1127,1494,1735,3791,6746,7586,8287,8722,
#Partially deleted in new
chr6	36969465	36986125	chr6:36969465-36986125	0	-	36969852	36986125	789624	11	649,68,48,94,60,52,58,78,107,85,273,	0,940,1181,3237,6192,7733,8168,8612,9039,12122,16387,
#Deleted in new
chr6	36970055	36972676	chr6:36970055-36972676	0	-	36970055	36970055	8553170	3	59,289,25,	0,350,2596,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	37005645	37010031	chr6:37005645-37010031	0	+	37005645	37005645	8553170	2	240,1198,	0,3188,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr6	37005646	37029070	chr6:37005646-37029070	3	+	37005817	37028163	789624	16	239,232,78,149,157,139,59,147,93,80,31,93,132,147,147,1123,	0,3187,5326,6059,7962,8315,8999,9245,10121,14894,15062,15865,16592,20145,21782,22301,
#Partially deleted in new
chr6	37005654	37028488	chr6:37005654-37028488	0	+	37005817	37013617	789624	14	231,232,157,139,59,147,61,80,31,93,132,147,147,541,	0,3179,7954,8307,8991,9237,10145,14886,15054,15857,16584,20137,21774,22293,
#Partially deleted in new
chr6	37005654	37011034	chr6:37005654-37011034	0	+	37005817	37009080	789624	3	231,248,62,	0,3179,5318,
#Partially deleted in new
chr6	37005657	37012033	chr6:37005657-37012033	0	+	37005657	37005657	8553170	4	228,232,78,328,	0,3176,5315,6048,
#Partially deleted in new
chr6	37005698	37028538	chr6:37005698-37028538	0	+	37005698	37005698	8553170	15	187,232,78,149,492,124,147,93,80,31,93,132,147,147,591,	0,3135,5274,6007,7910,8882,9193,10069,14842,15010,15813,16540,20093,21730,22249,
#Partially deleted in new
chr6	37005698	37011563	chr6:37005698-37011563	0	+	37005698	37005698	8553170	3	187,232,591,	0,3135,5274,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	37013024	37029069	chr6:37013024-37029069	0	+	37013024	37013024	8553170	12	741,139,59,147,93,80,31,93,132,147,147,1122,	0,937,1621,1867,2743,7516,7684,8487,9214,12767,14404,14923,
#Partially deleted in new
chr6	37013233	37020717	chr6:37013233-37020717	0	+	37013233	37013233	8553170	6	867,59,147,93,80,9,	0,1412,1658,2534,7307,7475,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	37013501	37028546	chr6:37013501-37028546	0	+	37013501	37013501	8553170	10	599,314,147,61,80,31,93,3700,147,599,	0,889,1390,2298,7039,7207,8010,8737,13927,14446,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	37021541	37029069	chr6:37021541-37029069	0	+	37021541	37021541	8553170	3	829,147,1641,	0,4250,5887,
#Partially deleted in new
chr6	37044859	37045189	chr6:37044859-37045189	7	+	37044859	37044859	16724991	1	330,	0,
#Deleted in new
chr6	37091313	37091806	chr6:37091313-37091806	7	+	37091313	37091313	16724991	1	493,	0,
#Deleted in new
chr6	37170202	37175426	chr6:37170202-37175426	3	+	37170575	37174091	789624	6	455,107,51,367,177,1493,	0,570,778,922,2793,3731,
#Deleted in new
chr6	37172467	37174247	chr6:37172467-37174247	0	+	37172467	37172467	8553170	3	327,177,314,	0,528,1466,
#Deleted in new
chr6	37172493	37174312	chr6:37172493-37174312	0	+	37172493	37172493	8553170	3	119,177,379,	0,502,1440,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	37212179	37257623	chr6:37212179-37257623	3	-	37212965	37219030	789624	3	817,616,56,	0,6246,45388,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	37212180	37257596	chr6:37212180-37257596	1	-	37215197	37219030	789624	4	816,85,616,29,	0,3017,6245,45387,
#Partially deleted in new
chr6	37212180	37257636	chr6:37212180-37257636	0	-	37212180	37212180	8553170	2	816,69,	0,45387,
#Partially deleted in new
chr6	37212675	37257637	chr6:37212675-37257637	0	-	37212675	37212675	8553170	3	321,85,70,	0,2522,44892,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	37217641	37218489	chr6:37217641-37218489	0	-	37217641	37217641	8553170	2	370,64,	0,784,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	37218169	37258155	chr6:37218169-37258155	0	-	37218169	37218169	8553170	2	872,593,	0,39393,
#Partially deleted in new
chr6	37257771	37332970	chr6:37257771-37332970	3	+	37257917	37331172	0	13	202,57,308,180,71,129,66,115,107,76,128,96,1927,	0,11822,21532,24413,25110,26564,29235,33471,55146,56044,58931,59339,73272,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	37295583	37295742	chr6:37295583-37295742	7	-	37295583	37295583	16724991	1	159,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	37353971	37394738	chr6:37353971-37394738	3	+	37354164	37390758	0	8	304,129,735,63,90,108,205,3997,	0,6474,14512,17540,20648,22954,27178,36770,
#Partially deleted in new
chr6	37353978	37368874	chr6:37353978-37368874	0	+	37354164	37359221	789624	4	297,160,129,391,	0,5204,6467,14505,
#Partially deleted in new
chr6	37354014	37391168	chr6:37354014-37391168	0	+	37354164	37368434	0	8	261,129,841,63,90,108,205,427,	0,6431,14363,17497,20605,22911,27135,36727,
#Partially deleted in new
chr6	37354063	37369030	chr6:37354063-37369030	0	+	37360505	37369030	789624	3	55,129,547,	0,6382,14420,
#Partially deleted in new
chr6	37354071	37370247	chr6:37354071-37370247	0	+	37354071	37354071	8553170	4	204,129,735,457,	0,6374,14412,15719,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	37354072	37368538	chr6:37354072-37368538	0	+	37354164	37361367	789624	4	203,129,221,55,	0,6373,7265,14411,
#Partially deleted in new
chr6	37354090	37391231	chr6:37354090-37391231	1	+	37354164	37390852	0	7	185,129,735,63,90,108,490,	0,6355,14393,17421,20529,22835,36651,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	37361184	37361483	chr6:37361184-37361483	3	+	37361184	37361184	8553170	1	299,	0,
#Partially deleted in new
chr6	37368875	37391062	chr6:37368875-37391062	0	+	37368875	37390852	789624	4	343,63,108,321,	0,2636,8050,21866,
#Partially deleted in new
chr6	37433218	37444083	chr6:37433218-37444083	0	+	37433218	37433218	8553170	4	159,139,74,85,	0,2405,3090,10780,
#Partially deleted in new
chr6	37433219	37481506	chr6:37433219-37481506	3	+	37435629	37480145	0	24	158,139,152,159,93,72,95,73,199,119,97,133,180,57,58,69,132,123,92,69,48,113,109,1494,	0,2404,10779,13071,17031,18586,19827,20020,25392,26346,28329,28750,29609,37801,38627,39199,40250,41304,42101,42906,44372,45189,45927,46793,
#Partially deleted in new
chr6	37433219	37462061	chr6:37433219-37462061	0	+	37435629	37462061	789624	10	158,139,152,159,93,72,199,119,97,92,	0,2404,10779,13071,17031,18586,25392,26346,28329,28750,
#Partially deleted in new
chr6	37459658	37462072	chr6:37459658-37462072	0	+	37459658	37459658	8553170	2	26,524,	0,1890,
#Deleted in new
chr6	37473567	37479195	chr6:37473567-37479195	0	+	37473567	37475503	789624	7	34,123,596,69,48,113,49,	0,956,1753,2558,4024,4841,5579,
#Deleted in new
chr6	37475318	37482827	chr6:37475318-37482827	0	+	37475318	37482528	789624	6	94,69,48,113,109,336,	0,807,2273,3090,3828,7173,
#Partially deleted in new
chr6	37482919	37499922	chr6:37482919-37499922	3	-	37483185	37499863	789624	4	370,53,95,101,	0,1890,2180,16902,
#Partially deleted in new
chr6	37507347	37535616	chr6:37507347-37535616	3	+	37507347	37507347	789624	4	357,70,25,85,	0,26928,27585,28184,
#Partially deleted in new
chr6	37543552	37546755	chr6:37543552-37546755	7	-	37543552	37543552	16724991	3	354,52,329,	0,2194,2874,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	37545144	37550860	chr6:37545144-37550860	3	+	37545144	37545144	8553170	5	269,91,170,175,293,	0,1010,3901,4833,5423,
#Partially deleted in new
chr6	37546590	37547280	chr6:37546590-37547280	5	-	37546590	37546590	16724991	2	167,206,	0,484,
#Deleted in new
chr6	37555364	37555422	chr6:37555364-37555422	3	-	37555364	37555364	5263520	1	58,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	37567715	37571460	chr6:37567715-37571460	3	+	37567715	37567715	8553170	1	3745,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr6	37630678	37697990	chr6:37630678-37697990	3	-	37637367	37696811	0	17	6781,109,131,135,153,24,178,152,285,297,330,270,133,197,175,140,1246,	0,7526,7858,13130,13818,15254,15519,16494,18303,19430,21332,23595,24121,25021,27566,33288,66066,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	37633736	37639824	chr6:37633736-37639824	0	-	37633736	37633736	8553170	3	3723,109,1288,	0,4468,4800,
#Partially deleted in new
chr6	37637959	37696811	chr6:37637959-37696811	1	-	37638058	37696811	0	16	354,131,135,153,24,178,152,285,297,330,270,133,197,175,140,67,	0,577,5849,6537,7973,8238,9213,11022,12149,14051,16314,16840,17740,20285,26007,58785,
#Partially deleted in new
chr6	37638627	37641897	chr6:37638627-37641897	0	-	37638627	37638627	8553170	2	40,161,	0,3109,
#Partially deleted in new
chr6	37638654	37646374	chr6:37638654-37646374	0	-	37638654	37646374	789624	4	13,135,153,177,	0,5154,5842,7543,
#Partially deleted in new
chr6	37646302	37648630	chr6:37646302-37648630	0	-	37646302	37646302	8553170	3	73,100,482,	0,870,1846,
#Partially deleted in new
chr6	37649870	37663989	chr6:37649870-37663989	0	-	37649870	37649870	8553170	6	535,330,270,1097,175,23,	0,2140,4403,4929,8374,14096,
#Partially deleted in new
chr6	37655722	37699306	chr6:37655722-37699306	0	-	37655722	37664005	789624	4	174,175,140,105,	0,2522,8244,43479,
#Partially deleted in new
chr6	37655879	37664316	chr6:37655879-37664316	0	-	37655879	37664005	789624	3	17,175,350,	0,2365,8087,
#Partially deleted in new
chr6	37815776	37819218	chr6:37815776-37819218	3	-	37815776	37815776	8553170	3	105,241,73,	0,2801,3369,
#Partially deleted in new
chr6	37819498	38154624	chr6:37819498-38154624	3	+	37819945	38152389	0	6	518,41,183,66,168,2390,	0,110460,242094,262893,297073,332736,
#Partially deleted in new
chr6	37819797	38154624	chr6:37819797-38154624	1	+	37819945	38152389	789624	5	219,41,183,168,2390,	0,110161,241795,296774,332437,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	37832921	37833185	chr6:37832921-37833185	3	-	37832921	37832921	8553170	1	264,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	37915572	37915742	chr6:37915572-37915742	3	+	37915572	37915572	8553170	1	170,	0,
#Partially deleted in new
chr6	37929958	38142331	chr6:37929958-38142331	0	+	37929958	38142293	789624	5	41,183,66,168,73,	0,131634,152433,186613,212300,
#Deleted in new
chr6	38002831	38003313	chr6:38002831-38003313	7	-	38002831	38002831	16724991	1	482,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	38061610	38062660	chr6:38061610-38062660	0	+	38061610	38061610	8553170	2	165,253,	0,797,
#Partially deleted in new
chr6	38088330	38152844	chr6:38088330-38152844	0	+	38088330	38088330	8553170	3	43,168,610,	0,28241,63904,
#Partially deleted in new
chr6	38142996	38152995	chr6:38142996-38152995	0	+	38142996	38142996	8553170	2	208,761,	0,9238,
#Partially deleted in new
chr6	38168450	38596067	chr6:38168450-38596067	1	-	38174984	38594308	789624	10	6732,79,108,190,110,120,220,265,364,298,	0,24068,87958,119821,176533,409149,411767,424125,425513,427319,
#Partially deleted in new
chr6	38168450	38639924	chr6:38168450-38639924	3	-	38174984	38598094	789624	11	6732,79,108,190,110,120,220,265,364,212,125,	0,24068,87958,119821,176533,409149,411767,424125,425513,429459,471349,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	38171892	38639884	chr6:38171892-38639884	1	-	38174984	38598094	789624	12	3290,79,108,190,110,120,220,265,364,212,200,85,	0,20626,84516,116379,173091,405707,408325,420683,422071,426017,440941,467907,
#Partially deleted in new
chr6	38174958	38595988	chr6:38174958-38595988	0	-	38504555	38594308	789624	11	224,79,108,190,110,69,120,220,265,364,219,	0,17560,81450,113313,170025,329535,402641,405259,417617,419005,420811,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	38174958	38595988	chr6:38174958-38595988	1	-	38174984	38594335	789624	11	224,79,108,190,110,87,120,220,265,412,219,	0,17560,81450,113313,170025,227858,402641,405259,417617,419005,420811,
#Deleted in new
chr6	38207273	38207345	chr6:38207273-38207345	3	+	38207273	38207273	8553170	1	72,	0,
#Deleted in new
chr6	38481691	38482531	chr6:38481691-38482531	3	+	38481691	38481691	8553170	2	95,465,	0,375,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	38565949	38566055	chr6:38565949-38566055	3	+	38565949	38565949	8553170	1	106,	0,
#Partially deleted in new
chr6	38577598	38598094	chr6:38577598-38598094	1	-	38577598	38598094	789624	5	121,220,265,364,185,	0,2619,14977,16365,20311,
#Deleted in new
chr6	38587322	38588529	chr6:38587322-38588529	7	+	38587322	38587322	16724991	1	1207,	0,
#Partially deleted in new
chr6	38593963	38640148	chr6:38593963-38640148	0	-	38593963	38594308	789624	3	364,148,349,	0,3946,45836,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	38594235	38639868	chr6:38594235-38639868	0	-	38594235	38598094	789624	4	92,212,200,69,	0,3674,18598,45564,
#Partially deleted in new
chr6	38675924	38703141	chr6:38675924-38703141	3	-	38677294	38703054	0	6	1459,90,68,141,83,171,	0,6087,6883,8449,10967,27046,
#Partially deleted in new
chr6	38675942	38683215	chr6:38675942-38683215	0	-	38675942	38675942	8553170	3	1441,90,408,	0,6069,6865,
#Partially deleted in new
chr6	38714050	38715217	chr6:38714050-38715217	3	-	38714050	38714050	8553170	2	248,152,	0,1015,
#Partially deleted in new
chr6	38715340	39030519	chr6:38715340-39030519	3	+	38722809	39030392	789624	93	75,424,135,85,152,190,164,177,114,108,102,147,198,77,100,120,136,188,81,117,120,133,116,107,76,190,197,127,236,105,114,63,101,138,241,200,154,164,103,105,162,225,173,179,188,87,108,135,162,247,242,141,238,143,135,123,214,110,164,193,123,131,154,165,227,119,104,177,168,216,138,128,172,156,156,183,106,253,191,122,119,203,74,153,156,117,102,161,157,153,190,122,415,	0,7435,7996,14561,19133,21726,22468,26370,35135,40631,46361,55072,60413,63047,64625,65913,67663,71424,74462,74948,76214,87838,90140,92269,98713,100127,107497,108221,110815,112843,116981,119238,122601,127027,127322,130233,133307,134910,136231,137353,137845,142177,145116,146939,148532,151250,151428,152721,155060,157195,157565,157895,160250,167569,167981,168535,171450,175311,179360,180692,182917,184435,190913,192615,194177,196127,198508,199860,201898,202584,206028,207717,208650,210714,214170,216470,220251,222633,223457,230126,234111,235977,256251,258320,259033,267005,268865,274671,293473,296874,297107,311205,314764,
#Partially deleted in new
chr6	38716560	38734514	chr6:38716560-38734514	0	+	38722809	38734514	789624	5	270,424,135,85,41,	0,6215,6776,13341,17913,
#Partially deleted in new
chr6	38722809	38972080	chr6:38722809-38972080	1	+	38722809	38971707	789624	82	390,135,85,152,190,164,177,114,108,102,147,198,77,100,120,136,188,81,117,120,133,116,107,76,190,197,127,236,105,114,63,101,138,241,200,154,164,103,105,162,225,173,179,188,87,108,135,162,247,242,141,238,143,135,123,214,110,164,193,123,131,154,165,227,119,104,177,168,216,138,128,172,156,156,183,106,253,191,122,119,203,489,	0,527,7092,11664,14257,14999,18901,27666,33162,38892,47603,52944,55578,57156,58444,60194,63955,66993,67479,68745,80369,82671,84800,91244,92658,100028,100752,103346,105374,109512,111769,115132,119558,119853,122764,125838,127441,128762,129884,130376,134708,137647,139470,141063,143781,143959,145252,147591,149726,150096,150426,152781,160100,160512,161066,163981,167842,171891,173223,175448,176966,183444,185146,186708,188658,191039,192391,194429,195115,198559,200248,201181,203245,206701,209001,212782,215164,215988,222657,226642,228508,248782,
#Partially deleted in new
chr6	38723121	39030529	chr6:38723121-39030529	1	+	38734514	39030392	789624	91	78,135,152,190,164,177,114,108,102,147,198,77,100,120,136,188,81,117,120,133,116,107,76,190,197,127,236,105,114,63,101,138,241,200,154,164,103,105,162,225,173,179,188,87,108,135,162,247,242,141,238,143,135,123,214,110,164,193,123,131,154,165,227,119,104,177,168,216,138,128,172,156,156,183,106,253,191,122,119,203,74,153,156,117,102,161,157,153,190,122,425,	0,215,11352,13945,14687,18589,27354,32850,38580,47291,52632,55266,56844,58132,59882,63643,66681,67167,68433,80057,82359,84488,90932,92346,99716,100440,103034,105062,109200,111457,114820,119246,119541,122452,125526,127129,128450,129572,130064,134396,137335,139158,140751,143469,143647,144940,147279,149414,149784,150114,152469,159788,160200,160754,163669,167530,171579,172911,175136,176654,183132,184834,186396,188346,190727,192079,194117,194803,198247,199936,200869,202933,206389,208689,212470,214852,215676,222345,226330,228196,248470,250539,251252,259224,261084,266890,285692,289093,289326,303424,306983,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	38744085	38744386	chr6:38744085-38744386	3	+	38744085	38744085	8553170	1	301,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	38762904	38764694	chr6:38762904-38764694	7	+	38762904	38762904	16724991	1	1790,	0,
#Deleted in new
chr6	38822306	38822404	chr6:38822306-38822404	3	-	38822306	38822306	8553170	1	98,	0,
#Partially deleted in new
chr6	38863968	38870490	chr6:38863968-38870490	0	+	38863968	38870490	789624	4	92,87,135,90,	0,2622,4093,6432,
#Partially deleted in new
chr6	38923028	38953099	chr6:38923028-38953099	3	-	38923028	38923028	789624	4	539,139,100,52,	0,1884,13264,30019,
#Partially deleted in new
chr6	38923028	38931371	chr6:38923028-38931371	0	-	38923028	38923028	8553170	3	539,139,75,	0,1884,8268,
#Deleted in new
chr6	38928030	38928153	chr6:38928030-38928153	7	+	38928030	38928030	16724991	1	123,	0,
#Partially deleted in new
chr6	38929349	38932917	chr6:38929349-38932917	1	-	38929349	38929349	8553170	3	265,77,41,	0,1947,3527,
#Deleted in new
chr6	39039602	39039985	chr6:39039602-39039985	7	-	39039602	39039602	16724991	1	383,	0,
#Partially deleted in new
chr6	39048797	39087743	chr6:39048797-39087743	3	+	39048840	39086073	0	13	121,97,108,119,107,154,160,61,70,89,139,42,1838,	0,7599,8674,16913,17399,24064,24812,29524,30159,30314,30766,31900,37108,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	39104063	39115189	chr6:39104063-39115189	3	-	39105431	39115089	789624	2	1713,307,	0,10819,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	39104063	39109572	chr6:39104063-39109572	1	-	39105431	39109319	789624	2	1713,259,	0,5250,
#Deleted in new
chr6	39110320	39112952	chr6:39110320-39112952	7	+	39110320	39110320	16724991	1	2632,	0,
#Deleted in new
chr6	39113074	39115071	chr6:39113074-39115071	0	-	39113074	39113074	8553170	2	646,189,	0,1808,
#Partially deleted in new
chr6	39188972	39229450	chr6:39188972-39229450	3	-	39190889	39229111	789624	5	2783,169,167,112,525,	0,5196,5621,6903,39953,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	39299000	39314553	chr6:39299000-39314553	3	-	39299426	39314320	789624	5	737,175,161,115,470,	0,4956,5494,11892,15083,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	39299011	39314461	chr6:39299011-39314461	1	-	39300395	39314320	789624	6	726,151,175,161,115,378,	0,1361,4945,5483,11881,15072,
#Partially deleted in new
chr6	39303978	39314425	chr6:39303978-39314425	0	-	39303978	39303978	8553170	3	677,115,342,	0,6914,10105,
#Partially deleted in new
chr6	39314697	39322554	chr6:39314697-39322554	1	-	39315001	39322540	789624	6	432,141,166,167,115,227,	0,1604,2084,3088,4321,7630,
#Partially deleted in new
chr6	39314820	39322540	chr6:39314820-39322540	1	-	39315123	39322540	789624	5	611,166,167,115,213,	0,1961,2965,4198,7507,
#Partially deleted in new
chr6	39314947	39322968	chr6:39314947-39322968	1	-	39315001	39322345	789624	6	182,166,167,115,114,145,	0,1834,2838,4071,7380,7876,
#Partially deleted in new
chr6	39315001	39322540	chr6:39315001-39322540	1	-	39315001	39322540	789624	5	128,166,167,115,213,	0,1780,2784,4017,7326,
#Partially deleted in new
chr6	39316170	39322588	chr6:39316170-39322588	3	-	39316218	39322540	789624	5	272,166,167,115,261,	0,611,1615,2848,6157,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr6	39329989	39725405	chr6:39329989-39725405	3	-	39336531	39725310	789624	23	6559,107,90,51,98,136,85,51,56,109,219,139,106,104,87,144,207,130,110,148,75,110,161,	0,13719,15710,16486,27287,30405,32444,55632,89958,101063,210013,214565,215593,248066,254908,256271,266064,283199,304859,309620,384702,390712,395255,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr6	39329989	39639683	chr6:39329989-39639683	0	-	39336531	39639683	789624	19	6559,107,90,98,136,85,51,56,109,219,139,106,104,87,144,207,130,110,74,	0,13719,15710,27287,30405,32444,55632,89958,101063,210013,214565,215593,248066,254908,256271,266064,283199,304859,309620,
#Partially deleted in new
chr6	39335099	39431374	chr6:39335099-39431374	1	-	39336531	39431159	789624	9	1449,107,90,98,136,85,51,56,322,	0,8609,10600,22177,25295,27334,50522,84848,95953,
#Deleted in new
chr6	39353746	39354172	chr6:39353746-39354172	7	+	39353746	39353746	16724991	1	426,	0,
#Deleted in new
chr6	39553810	39554943	chr6:39553810-39554943	7	+	39553810	39553810	16724991	1	1133,	0,
#Partially deleted in new
chr6	39583174	39596260	chr6:39583174-39596260	0	-	39583431	39596260	789624	4	305,87,144,207,	0,1723,3086,12879,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	39620344	39620464	chr6:39620344-39620464	3	-	39620344	39620344	8553170	1	120,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	39639677	39725405	chr6:39639677-39725405	0	-	39639677	39639677	8553170	5	80,75,156,110,161,	0,75014,78744,81024,85567,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	39689977	39714959	chr6:39689977-39714959	0	-	39689977	39689977	8553170	3	1885,75,75,	0,24714,24907,
#Partially deleted in new
chr6	39792297	39902450	chr6:39792297-39902450	1	+	39856302	39902037	789624	26	168,224,90,75,95,334,111,104,67,118,139,59,185,300,108,27,107,85,107,89,169,108,61,132,171,638,	0,63949,68630,72135,72682,75212,76525,78042,79208,80940,83032,85905,86106,86880,91664,94123,95188,96381,99043,99336,104514,104877,106579,107779,109004,109515,
#Partially deleted in new
chr6	39792365	39904868	chr6:39792365-39904868	1	+	39856302	39902037	789624	25	100,224,90,75,95,334,111,104,67,118,139,59,185,300,108,107,85,107,89,169,108,61,132,171,3056,	0,63881,68562,72067,72614,75144,76457,77974,79140,80872,82964,85837,86038,86812,91596,95120,96313,98975,99268,104446,104809,106511,107711,108936,109447,
#Partially deleted in new
chr6	39792373	39867521	chr6:39792373-39867521	0	+	39856302	39861158	789624	7	92,224,90,206,75,95,12,	0,63873,68554,68749,72059,72606,75136,
#Partially deleted in new
chr6	39792375	39880017	chr6:39792375-39880017	0	+	39792375	39792375	8553170	14	90,224,90,75,95,334,111,104,67,118,139,59,185,840,	0,63871,68552,72057,72604,75134,76447,77964,79130,80862,82954,85827,86028,86802,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	39792395	39862819	chr6:39792395-39862819	0	+	39792395	39792395	8553170	3	70,224,1892,	0,63851,68532,
#Partially deleted in new
chr6	39792996	39904877	chr6:39792996-39904877	3	+	39856302	39902037	789624	25	147,224,90,75,95,334,111,104,67,118,139,59,185,300,108,107,85,107,89,169,108,61,129,171,3065,	0,63250,67931,71436,71983,74513,75826,77343,78509,80241,82333,85206,85407,86181,90965,94489,95682,98344,98637,103815,104178,105880,107083,108305,108816,
#Partially deleted in new
chr6	39793017	39904872	chr6:39793017-39904872	1	+	39856302	39902037	789624	25	126,224,90,75,95,334,111,104,67,118,139,59,185,300,108,107,85,107,89,169,108,61,132,171,3060,	0,63229,67910,71415,71962,74492,75805,77322,78488,80220,82312,85185,85386,86160,90944,94468,95661,98323,98616,103794,104157,105859,107059,108284,108795,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	39818750	39823227	chr6:39818750-39823227	3	+	39818750	39818750	8553170	1	4477,	0,
#Partially deleted in new
chr6	39848565	39861161	chr6:39848565-39861161	1	+	39856302	39861158	789624	3	371,224,234,	0,7681,12362,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	39867312	39868879	chr6:39867312-39868879	0	+	39867312	39867312	8553170	1	1567,	0,
#Deleted in new
chr6	39881803	39888931	chr6:39881803-39888931	1	-	39881803	39881803	8553170	3	520,75,3181,	0,2146,3947,
#Deleted in new
chr6	39883515	39886568	chr6:39883515-39886568	1	-	39883515	39883515	8553170	1	3053,	0,
#Partially deleted in new
chr6	39885923	39904865	chr6:39885923-39904865	0	+	39885923	39885923	8553170	9	2840,107,89,169,108,61,132,171,3053,	0,5417,5710,10888,11251,12953,14153,15378,15889,
#Partially deleted in new
chr6	39887404	39891361	chr6:39887404-39891361	0	+	39887404	39887404	8553170	3	188,85,21,	0,1274,3936,
#Partially deleted in new
chr6	39888569	39897252	chr6:39888569-39897252	3	-	39888569	39888569	8553170	2	486,56,	0,8627,
#Partially deleted in new
chr6	39888789	39897353	chr6:39888789-39897353	1	-	39888789	39888789	789624	4	266,74,141,157,	0,2516,2833,8407,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	39888873	39897380	chr6:39888873-39897380	1	-	39888873	39888873	8553170	3	182,74,184,	0,2432,8323,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	39897339	39900071	chr6:39897339-39900071	1	-	39897339	39897339	8553170	3	61,52,323,	0,1621,2409,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	39899577	39932432	chr6:39899577-39932432	0	-	39904257	39925834	789624	11	298,120,121,111,113,112,62,165,168,127,130,	0,4565,10257,12686,13314,13739,14196,16490,26100,27751,32725,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	39904164	39927716	chr6:39904164-39927716	0	-	39904164	39904164	8553170	10	2953,63,121,111,113,112,62,165,168,388,	0,4875,5670,8099,8727,9152,9609,11903,21513,23164,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	39905058	39934551	chr6:39905058-39934551	1	-	39909046	39934417	789624	11	2059,63,121,111,113,112,62,165,168,127,257,	0,3981,4776,7205,7833,8258,8715,11009,20619,22270,29236,
#Partially deleted in new
chr6	39905320	39934497	chr6:39905320-39934497	1	-	39906356	39925834	789624	9	1797,121,111,113,112,62,165,168,203,	0,4514,6943,7571,7996,8453,10747,20357,28974,
#Partially deleted in new
chr6	39905524	39934421	chr6:39905524-39934421	3	-	39906356	39934417	789624	11	1593,48,121,111,113,112,62,165,168,127,127,	0,3530,4310,6739,7367,7792,8249,10543,20153,21804,28770,
#Partially deleted in new
chr6	39906356	39927587	chr6:39906356-39927587	0	-	39906356	39906356	8553170	10	761,48,121,111,113,112,62,165,168,259,	0,2698,3478,5907,6535,6960,7417,9711,19321,20972,
#Partially deleted in new
chr6	39909046	39927578	chr6:39909046-39927578	0	-	39909046	39909046	8553170	10	56,121,111,113,112,62,165,168,127,36,	0,788,3217,3845,4270,4727,7021,16631,18282,18496,
#Partially deleted in new
chr6	39913707	39934424	chr6:39913707-39934424	0	-	39913707	39913707	8553170	4	128,165,168,130,	0,2360,11970,20587,
#Partially deleted in new
chr6	39925716	39934459	chr6:39925716-39934459	0	-	39927281	39934417	789624	3	129,272,165,	0,1467,8578,
#Partially deleted in new
chr6	39934594	40000527	chr6:39934594-40000527	7	+	39934594	39934594	16724991	5	49,60,74,132,1036,	0,12911,13835,45497,64897,
#Deleted in new
chr6	39958413	39958833	chr6:39958413-39958833	7	-	39958413	39958413	16724991	1	420,	0,
#Partially deleted in new
chr6	39992814	40000233	chr6:39992814-40000233	5	+	39992814	39992814	16724991	2	357,742,	0,6677,
#Partially deleted in new
chr6	40271565	40276237	chr6:40271565-40276237	3	-	40271565	40271565	8553170	3	395,121,23,	0,4440,4649,
#Partially deleted in new
chr6	40334953	40379887	chr6:40334953-40379887	3	+	40334953	40334953	8553170	3	170,143,606,	0,2163,44328,
#Partially deleted in new
chr6	40340464	40379885	chr6:40340464-40379885	0	+	40340464	40340464	8553170	2	137,604,	0,38817,
#Deleted in new
chr6	40344343	40346151	chr6:40344343-40346151	3	-	40344343	40344343	8553170	2	413,141,	0,1667,
#Deleted in new
chr6	40378336	40379885	chr6:40378336-40379885	0	+	40378336	40378336	5263520	2	561,604,	0,945,
#Deleted in new
chr6	40378336	40379885	chr6:40378336-40379885	1	+	40378336	40378336	8553170	3	236,175,604,	0,386,945,
#Partially deleted in new
chr6	40391585	40587465	chr6:40391585-40587465	3	-	40391942	40433113	789624	3	1327,1418,525,	0,40128,195355,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	40407852	40407955	chr6:40407852-40407955	3	+	40407852	40407852	8553170	1	103,	0,
#Deleted in new
chr6	40501630	40502393	chr6:40501630-40502393	3	-	40501630	40501630	8553170	2	135,157,	0,606,
#Partially deleted in new
chr6	40505506	40523963	chr6:40505506-40523963	3	-	40505506	40505506	8553170	3	891,102,132,	0,11905,18325,
#Partially deleted in new
chr6	40516335	40523933	chr6:40516335-40523933	0	-	40516335	40516335	8553170	3	109,210,102,	0,968,7496,
#Partially deleted in new
chr6	40713410	40715363	chr6:40713410-40715363	3	-	40713410	40713410	8553170	3	53,103,457,	0,885,1496,
#Partially deleted in new
chr6	41026910	41039217	chr6:41026910-41039217	3	-	41028372	41035074	789624	9	1685,114,101,68,102,263,301,446,56,	0,3477,3744,4770,5125,5973,6970,7779,12251,
#Partially deleted in new
chr6	41028370	41035135	chr6:41028370-41035135	1	-	41028372	41035074	789624	8	225,114,101,68,102,263,301,446,	0,2017,2284,3310,3665,4513,5510,6319,
#Partially deleted in new
chr6	41028372	41032987	chr6:41028372-41032987	0	-	41028372	41028372	8553170	5	223,114,101,102,104,	0,2015,2282,3663,4511,
#Partially deleted in new
chr6	41033626	41071217	chr6:41033626-41071217	0	-	41052276	41071217	789624	5	555,446,99,59,86,	0,1063,18638,36449,37505,
#Deleted in new
chr6	41042553	41044337	chr6:41042553-41044337	3	+	41042985	41044137	789624	4	225,193,142,398,	0,412,1003,1386,
#Deleted in new
chr6	41042570	41044256	chr6:41042570-41044256	1	+	41042985	41043979	789624	3	208,193,317,	0,395,1369,
#Deleted in new
chr6	41042717	41044212	chr6:41042717-41044212	1	+	41042985	41044137	789624	4	91,193,142,273,	0,248,839,1222,
#Partially deleted in new
chr6	41053303	41064511	chr6:41053303-41064511	3	+	41053347	41061871	0	3	175,565,411,	0,8024,10797,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	41064777	41072591	chr6:41064777-41072591	3	-	41067334	41071634	0	6	2660,113,59,145,80,273,	0,4063,5298,6354,6818,7541,
#Partially deleted in new
chr6	41066474	41072489	chr6:41066474-41072489	1	-	41067334	41071634	0	6	963,113,59,145,80,155,	0,2366,3601,4657,5121,5860,
#Partially deleted in new
chr6	41066787	41072529	chr6:41066787-41072529	1	-	41067419	41071634	789624	5	650,59,145,80,195,	0,3288,4344,4808,5547,
#Partially deleted in new
chr6	41066792	41072577	chr6:41066792-41072577	1	-	41067419	41071634	789624	5	645,59,145,80,259,	0,3283,4339,4803,5526,
#Partially deleted in new
chr6	41066800	41072538	chr6:41066800-41072538	1	-	41067334	41071634	0	6	637,113,59,145,80,303,	0,2040,3275,4331,4795,5435,
#Partially deleted in new
chr6	41066938	41097758	chr6:41066938-41097758	1	-	41067419	41071634	789624	5	499,59,145,80,46,	0,3137,4193,4657,30774,
#Partially deleted in new
chr6	41067126	41072614	chr6:41067126-41072614	1	-	41067387	41071634	789624	4	311,145,80,296,	0,4005,4469,5192,
#Partially deleted in new
chr6	41067145	41072534	chr6:41067145-41072534	1	-	41067387	41071634	789624	4	292,145,80,200,	0,3986,4450,5189,
#Partially deleted in new
chr6	41067180	41071840	chr6:41067180-41071840	1	-	41067334	41071634	0	5	257,113,59,145,245,	0,1660,2895,3951,4415,
#Partially deleted in new
chr6	41067196	41072524	chr6:41067196-41072524	1	-	41067334	41071198	789624	5	241,113,59,145,206,	0,1644,2879,3935,5122,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	41067400	41097787	chr6:41067400-41097787	0	-	41067400	41071634	789624	8	37,113,59,145,80,83,222,75,	0,1440,2675,3731,4195,7866,8076,30312,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	41069037	41072468	chr6:41069037-41072468	0	-	41069037	41069037	8553170	4	1097,145,80,134,	0,2094,2558,3297,
#Deleted in new
chr6	41070824	41072490	chr6:41070824-41072490	1	-	41071048	41071634	789624	3	452,80,172,	0,771,1494,
#Deleted in new
chr6	41071040	41072320	chr6:41071040-41072320	1	-	41071048	41071634	789624	3	236,80,85,	0,555,1195,
#Deleted in new
chr6	41071498	41072563	chr6:41071498-41072563	0	-	41071498	41071498	8553170	2	177,245,	0,820,
#Partially deleted in new
chr6	41072944	41099976	chr6:41072944-41099976	3	+	41079089	41097410	0	10	140,136,87,147,132,106,167,174,102,2620,	0,6084,7866,11101,16634,17259,18583,19967,21451,24412,
#Partially deleted in new
chr6	41072982	41097950	chr6:41072982-41097950	1	+	41079089	41097410	0	9	102,136,147,132,106,167,174,102,594,	0,6046,11063,16596,17221,18545,19929,21413,24374,
#Partially deleted in new
chr6	41101021	41138727	chr6:41101021-41138727	5	+	41101021	41101021	16724991	24	157,105,39,144,205,63,192,99,85,190,56,154,190,442,273,220,232,126,173,202,166,97,119,119,	0,988,4088,4870,7283,7775,8691,10201,16276,16454,17107,17932,18252,19276,21955,23488,31272,31853,33535,34163,36374,36786,37202,37587,
#Partially deleted in new
chr6	41101033	41140835	chr6:41101033-41140835	7	+	41101033	41101033	16724991	23	145,105,39,205,956,134,85,190,56,184,223,135,129,158,273,336,64,220,157,205,118,214,238,	0,976,4076,7271,7915,10189,16264,16442,17095,17890,18207,19489,20312,20752,21943,23451,26511,31260,34151,36323,37575,38822,39564,
#Deleted in new
chr6	41139926	41140832	chr6:41139926-41140832	4	+	41139926	41139926	16724991	2	279,235,	0,671,
#Partially deleted in new
chr6	41149341	41154337	chr6:41149341-41154337	1	-	41149886	41154288	0	5	577,89,103,333,92,	0,1477,1940,4416,4904,
#Partially deleted in new
chr6	41149602	41154332	chr6:41149602-41154332	3	-	41149603	41154288	0	6	316,53,89,103,333,87,	0,658,1216,1679,4155,4643,
#Partially deleted in new
chr6	41149603	41154332	chr6:41149603-41154332	1	-	41149603	41154288	0	5	315,53,89,103,87,	0,657,1215,1678,4642,
#Deleted in new
chr6	41149803	41151620	chr6:41149803-41151620	0	-	41149803	41149803	8553170	4	115,53,89,339,	0,457,1015,1478,
#Deleted in new
chr6	41158505	41163103	chr6:41158505-41163103	1	-	41158919	41163082	0	5	275,234,91,351,61,	0,367,1286,2757,4537,
#Deleted in new
chr6	41158506	41163186	chr6:41158506-41163186	1	-	41158602	41163082	0	4	274,91,351,144,	0,1285,2756,4536,
#Deleted in new
chr6	41158506	41163176	chr6:41158506-41163176	3	-	41158763	41163082	0	5	274,194,91,351,134,	0,366,1285,2756,4536,
#Partially deleted in new
chr6	41190276	41201194	chr6:41190276-41201194	3	-	41192426	41201008	789624	5	2230,101,409,321,241,	0,2524,4148,7832,10677,
#Partially deleted in new
chr6	41228323	41238382	chr6:41228323-41238382	3	+	41228427	41236582	789624	6	167,331,51,61,132,1328,	0,390,1197,1738,8162,8731,
#Partially deleted in new
chr6	41228338	41237100	chr6:41228338-41237100	1	+	41228427	41236582	789624	6	152,331,51,61,132,41,	0,375,1182,1723,8147,8721,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	41228954	41238882	chr6:41228954-41238882	0	+	41228954	41232375	789624	6	90,51,61,142,132,1828,	0,566,1107,3408,7531,8100,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	41239519	41239626	chr6:41239519-41239626	7	-	41239519	41239519	16724991	1	107,	0,
#Deleted in new
chr6	41247368	41249649	chr6:41247368-41249649	7	+	41247368	41247368	16724991	2	255,321,	0,1960,
#Deleted in new
chr6	41250850	41251097	chr6:41250850-41251097	7	+	41250850	41250850	16724991	1	247,	0,
#Deleted in new
chr6	41252695	41252858	chr6:41252695-41252858	7	+	41252695	41252695	16724991	1	163,	0,
#Partially deleted in new
chr6	41267925	41286665	chr6:41267925-41286665	1	-	41267934	41286655	789624	4	163,193,357,59,	0,13035,14469,18681,
#Deleted in new
chr6	41269874	41270239	chr6:41269874-41270239	7	-	41269874	41269874	16724991	1	365,	0,
#Partially deleted in new
chr6	41275203	41286719	chr6:41275203-41286719	3	-	41276124	41286655	0	4	1027,193,357,113,	0,5757,7191,11403,
#Partially deleted in new
chr6	41275620	41286682	chr6:41275620-41286682	1	-	41276183	41286655	0	3	610,357,76,	0,6774,10986,
#Partially deleted in new
chr6	41275985	41281234	chr6:41275985-41281234	0	-	41275985	41275985	8553170	2	245,274,	0,4975,
#Partially deleted in new
chr6	41279538	41286682	chr6:41279538-41286682	1	-	41280881	41286655	0	3	1615,357,76,	0,2856,7068,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	41280190	41282066	chr6:41280190-41282066	0	-	41280190	41280190	8553170	1	1876,	0,
#Partially deleted in new
chr6	41282253	41286682	chr6:41282253-41286682	0	-	41282253	41282253	8553170	2	498,76,	0,4353,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	41302465	41302572	chr6:41302465-41302572	3	-	41302465	41302465	8553170	1	107,	0,
#Deleted in new
chr6	41308165	41308565	chr6:41308165-41308565	7	-	41308165	41308165	16724991	1	400,	0,
#Partially deleted in new
chr6	41335654	41350858	chr6:41335654-41350858	1	+	41335876	41350703	0	6	274,342,136,114,107,181,	0,432,6139,6381,7263,15023,
#Partially deleted in new
chr6	41335788	41350887	chr6:41335788-41350887	3	+	41335876	41350864	0	5	140,342,136,114,210,	0,298,6005,6247,14889,
#Partially deleted in new
chr6	41335850	41350864	chr6:41335850-41350864	1	+	41335876	41350703	0	6	78,342,136,150,107,187,	0,236,5943,6149,7067,14827,
#Deleted in new
chr6	41381391	41381832	chr6:41381391-41381832	3	-	41381391	41381391	8553170	1	441,	0,
#Deleted in new
chr6	41405818	41406561	chr6:41405818-41406561	3	+	41405818	41405818	8553170	1	743,	0,
#Partially deleted in new
chr6	41494852	41546243	chr6:41494852-41546243	0	-	41494852	41494852	8553170	2	41,155,	0,51236,
#Partially deleted in new
chr6	41502443	41519852	chr6:41502443-41519852	3	+	41502443	41502443	789624	3	168,171,477,	0,359,16932,
#Partially deleted in new
chr6	41518372	41519852	chr6:41518372-41519852	0	+	41518372	41518372	8553170	2	183,477,	0,1003,
#Partially deleted in new
chr6	41523894	41546176	chr6:41523894-41546176	0	-	41523894	41523894	789624	2	331,88,	0,22194,
#Partially deleted in new
chr6	41523894	41548621	chr6:41523894-41548621	3	-	41523894	41523894	789624	2	331,244,	0,24483,
#Partially deleted in new
chr6	41523896	41546074	chr6:41523896-41546074	1	-	41523896	41523896	8553170	2	329,75,	0,22103,
#Partially deleted in new
chr6	41523904	41547548	chr6:41523904-41547548	1	-	41523904	41523904	789624	2	321,88,	0,23556,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr6	41546425	41602383	chr6:41546425-41602383	1	+	41565760	41598936	789624	17	442,220,96,123,87,148,214,105,88,84,208,77,102,122,67,170,3595,	0,19319,31560,38343,39005,40583,40873,41367,42218,43345,43537,43845,44795,48444,50750,51355,52363,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr6	41546425	41602384	chr6:41546425-41602384	3	+	41565760	41598936	789624	17	442,220,96,123,87,148,211,105,88,84,172,77,102,122,67,170,3596,	0,19319,31560,38343,39005,40583,40876,41367,42218,43345,43573,43845,44795,48444,50750,51355,52363,
#Partially deleted in new
chr6	41546572	41599959	chr6:41546572-41599959	1	+	41565760	41598936	789624	17	295,220,96,123,87,148,214,105,88,84,172,77,102,122,67,170,1171,	0,19172,31413,38196,38858,40436,40726,41220,42071,43198,43426,43698,44648,48297,50603,51208,52216,
#Partially deleted in new
chr6	41546647	41599963	chr6:41546647-41599963	1	+	41565760	41598936	789624	17	220,220,96,123,81,148,214,105,88,84,208,77,102,122,67,170,1175,	0,19097,31338,38121,38789,40361,40651,41145,41996,43123,43315,43623,44573,48222,50528,51133,52141,
#Partially deleted in new
chr6	41565748	41600626	chr6:41565748-41600626	1	+	41565760	41598936	789624	16	216,96,123,87,148,214,105,88,84,208,77,102,122,67,170,1838,	0,12237,19020,19682,21260,21550,22044,22895,24022,24214,24522,25472,29121,31427,32032,33040,
#Partially deleted in new
chr6	41570173	41584818	chr6:41570173-41584818	0	+	41570277	41584818	789624	3	221,96,50,	0,7812,14595,
#Deleted in new
chr6	41598722	41598788	chr6:41598722-41598788	3	+	41598722	41598722	5263520	1	66,	0,
#Partially deleted in new
chr6	41636881	41653474	chr6:41636881-41653474	0	+	41638749	41653474	789624	5	52,87,183,225,156,	0,1857,9244,12737,16437,
#Partially deleted in new
chr6	41637031	41653528	chr6:41637031-41653528	0	+	41638749	41653528	789624	6	242,236,87,183,225,210,	0,1108,1707,9094,12587,16287,
#Partially deleted in new
chr6	41637067	41654239	chr6:41637067-41654239	3	+	41638749	41653575	789624	5	206,87,183,225,921,	0,1671,9058,12551,16251,
#Partially deleted in new
chr6	41638437	41649653	chr6:41638437-41649653	0	+	41638749	41649653	789624	4	48,87,183,35,	0,301,7688,11181,
#Partially deleted in new
chr6	41638446	41654246	chr6:41638446-41654246	0	+	41638749	41653575	789624	5	206,87,183,225,928,	0,292,7679,11172,14872,
#Partially deleted in new
chr6	41638476	41653639	chr6:41638476-41653639	1	+	41638749	41653575	789624	4	176,87,225,321,	0,262,11142,14842,
#Partially deleted in new
chr6	41638498	41649743	chr6:41638498-41649743	0	+	41638749	41649743	789624	3	327,183,125,	0,7627,11120,
#Partially deleted in new
chr6	41638526	41653444	chr6:41638526-41653444	0	+	41638749	41653444	789624	3	299,225,126,	0,11092,14792,
#Partially deleted in new
chr6	41646253	41650112	chr6:41646253-41650112	0	+	41646253	41646253	8553170	2	55,494,	0,3365,
#Partially deleted in new
chr6	41666905	41667649	chr6:41666905-41667649	7	+	41666905	41666905	16724991	1	744,	0,
#Partially deleted in new
chr6	41683977	41735060	chr6:41683977-41735060	1	-	41684598	41691213	789624	10	1101,148,76,57,121,81,255,235,119,161,	0,2112,3116,3775,3930,5753,6685,7023,48671,50922,
#Partially deleted in new
chr6	41683977	41691476	chr6:41683977-41691476	0	-	41684598	41691471	789624	8	1101,148,76,57,121,81,255,476,	0,2112,3116,3775,3930,5753,6685,7023,
#Partially deleted in new
chr6	41683977	41736259	chr6:41683977-41736259	1	-	41684598	41736165	789624	9	1101,148,76,57,121,81,255,235,114,	0,2112,3116,3775,3930,5753,6685,7023,52168,
#Partially deleted in new
chr6	41683977	41691042	chr6:41683977-41691042	0	-	41684598	41691042	789624	7	1101,148,76,57,121,81,42,	0,2112,3116,3775,3930,5753,7023,
#Partially deleted in new
chr6	41683978	41734401	chr6:41683978-41734401	1	-	41684598	41691213	789624	9	1100,148,76,57,121,81,255,235,89,	0,2111,3115,3774,3929,5752,6684,7022,50334,
#Partially deleted in new
chr6	41683978	41735527	chr6:41683978-41735527	1	-	41684598	41691213	789624	8	1100,148,76,57,121,81,235,178,	0,2111,3115,3774,3929,5752,7022,51371,
#Partially deleted in new
chr6	41683979	41735608	chr6:41683979-41735608	3	-	41684598	41691213	789624	9	1099,148,76,57,121,81,255,235,259,	0,2110,3114,3773,3928,5751,6683,7021,51370,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	41686528	41733853	chr6:41686528-41733853	1	-	41687089	41691213	789624	7	641,57,121,81,255,235,1205,	0,1224,1379,3202,4134,4472,46120,
#Partially deleted in new
chr6	41687093	41734401	chr6:41687093-41734401	0	-	41687093	41691213	789624	7	76,57,121,81,255,235,89,	0,659,814,2637,3569,3907,47219,
#Deleted in new
chr6	41687093	41688200	chr6:41687093-41688200	0	-	41687093	41687093	8553170	2	76,448,	0,659,
#Partially deleted in new
chr6	41687162	41723726	chr6:41687162-41723726	0	-	41687162	41691213	789624	7	7,57,121,81,255,235,266,	0,590,745,2568,3500,3838,36298,
#Partially deleted in new
chr6	41687909	41705940	chr6:41687909-41705940	0	-	41687909	41691213	789624	5	119,81,255,235,294,	0,1821,2753,3091,17737,
#Partially deleted in new
chr6	41690893	41733690	chr6:41690893-41733690	0	-	41690893	41691213	789624	4	24,235,91,27,	0,107,41755,42770,
#Partially deleted in new
chr6	41691000	41705940	chr6:41691000-41705940	0	-	41691000	41691213	789624	3	235,106,24,	0,14646,14916,
#Partially deleted in new
chr6	41691115	41735060	chr6:41691115-41735060	0	-	41691115	41691213	789624	2	120,161,	0,43784,
#Partially deleted in new
chr6	41691177	41734194	chr6:41691177-41734194	0	-	41691177	41691213	789624	2	58,110,	0,42907,
#Partially deleted in new
chr6	41691177	41733828	chr6:41691177-41733828	0	-	41691177	41691213	789624	2	58,165,	0,42486,
#Partially deleted in new
chr6	41720395	41734032	chr6:41720395-41734032	3	+	41720395	41720395	8553170	2	293,115,	0,13522,
#Partially deleted in new
chr6	41736710	41747397	chr6:41736710-41747397	3	-	41736851	41747334	0	9	294,99,148,120,200,119,118,151,122,	0,1019,3088,3780,5579,6560,7686,7947,10565,
#Partially deleted in new
chr6	41740601	41747395	chr6:41740601-41747395	0	-	41740601	41747334	789624	4	9,200,151,120,	0,1688,4056,6674,
#Partially deleted in new
chr6	41740837	41747401	chr6:41740837-41747401	1	-	41740974	41747334	0	7	390,48,200,119,118,151,126,	0,958,1452,2433,3559,3820,6438,
#Partially deleted in new
chr6	41744478	41754109	chr6:41744478-41754109	0	-	41744478	41753968	789624	3	36,151,212,	0,179,9419,
#Deleted in new
chr6	41764291	41764460	chr6:41764291-41764460	3	-	41764291	41764291	8553170	1	169,	0,
#Partially deleted in new
chr6	41770175	41778181	chr6:41770175-41778181	1	-	41770618	41776987	0	6	1358,149,162,187,89,149,	0,1640,2622,5243,6746,7857,
#Partially deleted in new
chr6	41770175	41779900	chr6:41770175-41779900	3	-	41770618	41776987	0	7	1358,149,162,187,89,144,85,	0,1640,2622,5243,6746,7857,9640,
#Partially deleted in new
chr6	41772843	41780466	chr6:41772843-41780466	0	-	41772843	41780433	789624	4	116,187,89,82,	0,2575,4078,7541,
#Partially deleted in new
chr6	41775562	41786542	chr6:41775562-41786542	0	-	41775562	41776987	789624	4	43,89,144,50,	0,1359,2470,10930,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	41776418	41778176	chr6:41776418-41778176	0	-	41776418	41776418	8553170	4	204,89,343,144,	0,503,1066,1614,
#Partially deleted in new
chr6	41780348	41790141	chr6:41780348-41790141	0	+	41783473	41783814	789624	10	478,171,144,505,138,204,205,1386,105,611,	0,1001,3113,3385,4586,4988,5779,6091,8883,9182,
#Partially deleted in new
chr6	41780761	41787372	chr6:41780761-41787372	3	+	41783473	41787129	789624	8	65,171,144,108,138,204,205,611,	0,588,2700,3369,4173,4575,5366,6000,
#Partially deleted in new
chr6	41780771	41789891	chr6:41780771-41789891	0	+	41780771	41780771	8553170	9	55,171,777,138,204,205,1064,105,324,	0,578,2690,4163,4565,5356,5990,8460,8796,
#Partially deleted in new
chr6	41780945	41789895	chr6:41780945-41789895	3	+	41783473	41787129	8553170	9	575,144,108,138,204,205,1064,105,328,	0,2516,3185,3989,4391,5182,5816,8286,8622,
#Partially deleted in new
chr6	41781357	41787372	chr6:41781357-41787372	1	+	41784118	41787129	789624	6	163,777,138,204,205,611,	0,2104,3577,3979,4770,5404,
#Deleted in new
chr6	41783473	41787129	chr6:41783473-41787129	1	+	41783473	41787129	789624	6	132,108,138,204,205,368,	0,657,1461,1863,2654,3288,
#Deleted in new
chr6	41784118	41786711	chr6:41784118-41786711	1	+	41784118	41786711	789624	5	120,138,204,205,272,	0,816,1218,2009,2321,
#Deleted in new
chr6	41784118	41787129	chr6:41784118-41787129	1	+	41784118	41787129	789624	5	120,138,204,205,368,	0,816,1218,2009,2643,
#Deleted in new
chr6	41784791	41785421	chr6:41784791-41785421	0	+	41784791	41784791	8553170	2	281,85,	0,545,
#Deleted in new
chr6	41785005	41786736	chr6:41785005-41786736	0	+	41785005	41786700	789624	3	67,204,609,	0,331,1122,
#Partially deleted in new
chr6	41787661	41789898	chr6:41787661-41789898	3	+	41787697	41789328	789624	3	164,105,368,	0,1570,1869,
#Partially deleted in new
chr6	41787664	41789896	chr6:41787664-41789896	1	+	41787697	41789328	789624	3	161,105,329,	0,1567,1903,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	41789895	41894160	chr6:41789895-41894160	3	-	41796532	41806983	789624	7	6828,206,109,205,1384,74,228,	0,8828,9934,13910,15732,81668,104037,
#Deleted in new
chr6	41791409	41791477	chr6:41791409-41791477	3	+	41791409	41791409	8553170	1	68,	0,
#Partially deleted in new
chr6	41796497	41887329	chr6:41796497-41887329	1	-	41796690	41806983	789624	10	226,55,109,205,1384,74,80,157,100,56,	0,2377,3332,7308,9130,75066,76435,77585,89949,90776,
#Partially deleted in new
chr6	41796676	41805745	chr6:41796676-41805745	0	-	41799899	41805745	789624	4	47,206,109,118,	0,2047,3153,8951,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	41797644	41895361	chr6:41797644-41895361	1	-	41798676	41806983	789624	7	1285,109,205,1384,74,82,38,	0,2185,6161,7983,73919,94149,97679,
#Partially deleted in new
chr6	41806938	41894455	chr6:41806938-41894455	0	-	41806938	41806983	789624	4	73,74,82,523,	0,64625,84855,86994,
#Deleted in new
chr6	41832853	41832993	chr6:41832853-41832993	3	+	41832853	41832853	8553170	1	140,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	41868621	41869731	chr6:41868621-41869731	3	+	41868621	41868621	8553170	2	285,118,	0,992,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	41905353	41921099	chr6:41905353-41921099	3	-	41907071	41921018	789624	4	1934,254,155,95,	0,3915,11431,15651,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	41905354	41920943	chr6:41905354-41920943	0	-	41905354	41905354	8553170	5	1933,254,116,155,144,	0,3914,7630,11430,15445,
#Partially deleted in new
chr6	41906195	41921139	chr6:41906195-41921139	0	-	41906195	41906195	8553170	3	1092,254,135,	0,3073,14809,
#Partially deleted in new
chr6	41906803	41921119	chr6:41906803-41921119	1	-	41907262	41921018	789624	4	484,178,155,115,	0,2541,9981,14201,
#Partially deleted in new
chr6	41907266	41917614	chr6:41907266-41917614	0	-	41907266	41916929	789624	4	21,254,155,101,	0,2002,9518,10247,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	41908951	41921093	chr6:41908951-41921093	1	-	41909253	41921018	789624	3	571,155,89,	0,7833,12053,
#Partially deleted in new
chr6	41916855	41921105	chr6:41916855-41921105	0	-	41916855	41917892	789624	3	84,122,101,	0,939,4149,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	41917415	41917526	chr6:41917415-41917526	3	-	41917415	41917415	8553170	1	111,	0,
#Partially deleted in new
chr6	41921187	41933046	chr6:41921187-41933046	3	+	41921562	41932706	0	7	643,163,139,134,161,103,686,	0,6186,8944,9447,10208,10540,11173,
#Partially deleted in new
chr6	41921529	41927644	chr6:41921529-41927644	0	+	41921529	41921529	8553170	2	301,271,	0,5844,
#Partially deleted in new
chr6	41921533	41932655	chr6:41921533-41932655	0	+	41921562	41931415	789624	6	297,163,134,161,103,295,	0,5840,9101,9862,10194,10827,
#Partially deleted in new
chr6	41921549	41930357	chr6:41921549-41930357	0	+	41921549	41921549	8553170	3	281,163,226,	0,5824,8582,
#Partially deleted in new
chr6	41927434	41932996	chr6:41927434-41932996	0	+	41927434	41931717	789624	6	102,139,134,161,127,636,	0,2697,3200,3961,4269,4926,
#Partially deleted in new
chr6	41934932	41941848	chr6:41934932-41941848	3	-	41935939	41941649	0	5	1175,137,160,216,397,	0,1626,2302,5437,6519,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	41934933	42050357	chr6:41934933-42050357	1	-	41935939	41940540	0	5	1174,137,160,216,707,	0,1625,2301,5436,114717,
#Partially deleted in new
chr6	41934933	42048894	chr6:41934933-42048894	1	-	41935939	41936681	0	5	1174,137,160,182,394,	0,1625,2301,95075,113567,
#Partially deleted in new
chr6	41934955	41941519	chr6:41934955-41941519	1	-	41935939	41940999	789624	5	1152,137,160,216,568,	0,1603,2279,5414,5996,
#Partially deleted in new
chr6	41934955	42048968	chr6:41934955-42048968	1	-	41935939	41940540	0	5	1152,137,160,216,468,	0,1603,2279,5414,113545,
#Partially deleted in new
chr6	41934955	42048894	chr6:41934955-42048894	1	-	41935939	41936681	0	4	1152,137,160,394,	0,1603,2279,113545,
#Partially deleted in new
chr6	41934984	41941755	chr6:41934984-41941755	1	-	41935939	41941649	0	4	1123,137,160,304,	0,1574,2250,6467,
#Partially deleted in new
chr6	41935434	42048708	chr6:41935434-42048708	1	-	41935850	41940540	789624	4	673,160,216,208,	0,1800,4935,113066,
#Partially deleted in new
chr6	41935895	42048704	chr6:41935895-42048704	0	-	41935895	41935895	8553170	3	212,160,204,	0,1339,112605,
#Partially deleted in new
chr6	41936195	41940585	chr6:41936195-41940585	0	-	41936543	41940585	789624	3	500,160,216,	0,1039,4174,
#Partially deleted in new
chr6	41936483	42048690	chr6:41936483-42048690	0	-	41936483	41936483	8553170	3	212,160,190,	0,751,112017,
#Partially deleted in new
chr6	41936648	41938266	chr6:41936648-41938266	0	-	41936648	41936648	8553170	3	47,160,101,	0,586,1517,
#Partially deleted in new
chr6	41936651	42048688	chr6:41936651-42048688	0	-	41936651	41936681	789624	4	44,160,182,188,	0,583,93357,111849,
#Partially deleted in new
chr6	41936672	41940726	chr6:41936672-41940726	0	-	41936672	41940540	789624	3	23,160,357,	0,562,3697,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	41936783	41941766	chr6:41936783-41941766	0	-	41936783	41936783	8553170	2	611,315,	0,4668,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	41936854	42048676	chr6:41936854-42048676	0	-	41936854	41936854	8553170	3	540,216,176,	0,3515,111646,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	41937005	42048690	chr6:41937005-42048690	0	-	41937005	41937005	8553170	2	389,190,	0,111495,
#Partially deleted in new
chr6	41937174	42048690	chr6:41937174-42048690	0	-	41937174	41937174	8553170	3	220,182,190,	0,92834,111326,
#Partially deleted in new
chr6	41937712	42048688	chr6:41937712-42048688	0	-	41937712	41937712	8553170	3	72,216,188,	0,2657,110788,
#Partially deleted in new
chr6	41940409	42048686	chr6:41940409-42048686	0	-	41940409	41940540	789624	3	176,182,186,	0,89599,108091,
#Partially deleted in new
chr6	41940493	42048688	chr6:41940493-42048688	0	-	41940493	41940999	789624	3	92,210,188,	0,458,108007,
#Partially deleted in new
chr6	42010837	42048702	chr6:42010837-42048702	0	-	42010837	42010837	8553170	2	230,202,	0,37663,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	42018407	42018514	chr6:42018407-42018514	3	-	42018407	42018407	8553170	1	107,	0,
#Partially deleted in new
chr6	42030052	42031382	chr6:42030052-42031382	3	+	42030052	42030052	8553170	2	24,137,	0,1193,
#Deleted in new
chr6	42047998	42048534	chr6:42047998-42048534	0	-	42047998	42047998	8553170	1	536,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	42050512	42057789	chr6:42050512-42057789	1	+	42050541	42057549	789624	5	74,157,99,63,401,	0,844,5018,5439,6876,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	42050521	42087461	chr6:42050521-42087461	1	+	42050541	42077214	0	10	65,157,99,63,125,148,143,122,140,743,	0,835,5009,5430,6867,15790,17943,20825,26578,36197,
#Partially deleted in new
chr6	42050521	42087071	chr6:42050521-42087071	1	+	42050541	42086734	0	9	65,157,99,63,125,148,143,140,353,	0,835,5009,5430,6867,15790,17943,26578,36197,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	42050521	42078872	chr6:42050521-42078872	1	+	42050541	42077214	0	10	65,157,99,63,125,148,143,122,140,1340,	0,835,5009,5430,6867,15790,17943,20825,26578,27011,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	42050523	42083274	chr6:42050523-42083274	3	+	42050541	42077545	0	9	63,157,99,63,125,148,143,140,5742,	0,833,5007,5428,6865,15788,17941,26576,27009,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	42050523	42056351	chr6:42050523-42056351	1	+	42050541	42056022	789624	4	63,157,99,400,	0,833,5007,5428,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	42050530	42051780	chr6:42050530-42051780	0	+	42050530	42050530	8553170	2	56,424,	0,826,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	42050538	42063759	chr6:42050538-42063759	0	+	42050538	42050538	8553170	6	48,157,99,63,125,574,	0,818,4992,5413,6850,12647,
#Partially deleted in new
chr6	42050875	42077642	chr6:42050875-42077642	1	+	42051500	42077545	789624	9	276,157,99,63,125,148,104,140,110,	0,481,4655,5076,6513,15436,17628,26224,26657,
#Partially deleted in new
chr6	42050923	42056023	chr6:42050923-42056023	1	+	42051500	42056022	789624	4	228,157,99,72,	0,433,4607,5028,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	42092232	42094259	chr6:42092232-42094259	3	-	42092232	42092232	8553170	1	2027,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	42101117	42142444	chr6:42101117-42142444	3	-	42103760	42142444	789624	5	2761,3121,76,107,145,	0,3345,9098,27554,41182,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	42126376	42142619	chr6:42126376-42142619	1	-	42126795	42142444	789624	3	467,107,320,	0,2295,15923,
#Partially deleted in new
chr6	42155405	42178342	chr6:42155405-42178342	0	+	42173613	42178342	789624	4	80,176,482,63,	0,7514,17927,22874,
#Partially deleted in new
chr6	42155405	42180049	chr6:42155405-42180049	1	+	42173625	42179403	789624	7	188,176,482,150,24,94,807,	0,7514,17927,22874,23206,23396,23837,
#Partially deleted in new
chr6	42155425	42163439	chr6:42155425-42163439	1	+	42155476	42163249	789624	2	60,520,	0,7494,
#Partially deleted in new
chr6	42155435	42180056	chr6:42155435-42180056	3	+	42173613	42179403	789624	6	158,176,482,150,94,814,	0,7484,17897,22844,23366,23807,
#Partially deleted in new
chr6	42155445	42163418	chr6:42155445-42163418	3	+	42155539	42163249	789624	2	148,499,	0,7474,
#Partially deleted in new
chr6	42155445	42180054	chr6:42155445-42180054	1	+	42173613	42179403	789624	6	148,547,482,150,94,812,	0,7474,17887,22834,23356,23797,
#Partially deleted in new
chr6	42173290	42180049	chr6:42173290-42180049	1	+	42173613	42179403	789624	4	524,150,94,807,	0,4989,5511,5952,
#Partially deleted in new
chr6	42184400	42194916	chr6:42184400-42194916	3	-	42184814	42194820	789624	4	542,118,150,303,	0,1279,4181,10213,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	42206800	42217865	chr6:42206800-42217865	3	-	42208288	42217849	0	7	1572,90,109,137,73,65,64,	0,2057,3687,4980,7319,7479,11001,
#Partially deleted in new
chr6	42224930	42452051	chr6:42224930-42452051	1	-	42228344	42269590	789624	18	3739,212,207,114,89,76,104,140,67,385,309,151,47,1695,112,83,85,31,	0,7750,11274,18317,21525,29920,31797,32032,33204,34408,38329,39773,40820,43223,75707,138066,226246,227090,
#Partially deleted in new
chr6	42225224	42452045	chr6:42225224-42452045	3	-	42228344	42269590	789624	18	3445,212,207,114,89,76,104,140,67,385,249,151,47,1695,112,83,85,25,	0,7456,10980,18023,21231,29626,31503,31738,32910,34114,38095,39479,40526,42929,75413,137772,225952,226796,
#Partially deleted in new
chr6	42228125	42451261	chr6:42228125-42451261	1	-	42228344	42269107	789624	17	544,212,207,114,89,76,104,140,67,385,151,47,1098,350,112,133,85,	0,4555,8079,15122,18330,26725,28602,28837,30009,31213,36578,37625,40028,41373,72512,134821,223051,
#Partially deleted in new
chr6	42228148	42451261	chr6:42228148-42451261	1	-	42228344	42269590	789624	16	521,248,207,114,89,76,104,140,67,385,151,47,1695,112,133,85,	0,4532,8056,15099,18307,26702,28579,28814,29986,31190,36555,37602,40005,72489,134798,223028,
#Partially deleted in new
chr6	42228148	42451261	chr6:42228148-42451261	1	-	42228344	42269590	789624	16	521,212,207,114,89,76,104,140,67,385,151,47,1695,112,133,85,	0,4532,8056,15099,18307,26702,28579,28814,29986,31190,36555,37602,40005,72489,134798,223028,
#Deleted in new
chr6	42499709	42500022	chr6:42499709-42500022	7	+	42499709	42499709	16724991	1	313,	0,
#Partially deleted in new
chr6	42564061	42693504	chr6:42564061-42693504	3	+	42564319	42691173	0	47	336,260,79,114,131,139,63,121,108,89,99,164,100,129,184,62,111,66,123,64,125,53,103,49,155,103,110,81,179,200,94,162,104,79,149,56,97,68,136,91,131,109,57,78,171,102,2473,	0,9672,28089,30129,39526,41659,42527,48109,51009,51940,53178,68490,68743,71356,72949,76147,77520,78354,80152,80411,81404,84056,86222,87961,88429,91559,93962,94178,94584,95594,98122,99196,101347,102105,106030,106598,109729,110064,111994,112721,114477,115662,118993,120732,124154,125507,126970,
#Partially deleted in new
chr6	42564061	42693504	chr6:42564061-42693504	1	+	42564319	42691173	0	47	336,260,79,114,131,139,63,121,108,89,99,164,100,129,184,62,111,66,123,64,125,53,103,49,155,103,110,81,179,200,94,162,104,79,149,56,97,68,136,91,131,109,57,78,171,102,2473,	0,9672,28089,30129,39526,41659,42527,48109,51009,51940,53347,68490,68743,71356,72949,76147,77520,78354,80152,80411,81404,84056,86222,87961,88429,91559,93962,94178,94584,95594,98122,99196,101347,102105,106030,106598,109729,110064,111994,112721,114477,115662,118993,120732,124154,125507,126970,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	42564061	42620351	chr6:42564061-42620351	1	+	42564319	42619506	0	12	336,260,79,114,131,139,63,121,108,89,99,884,	0,9672,28089,30129,39526,41659,42527,48109,51009,51940,53347,55406,
#Partially deleted in new
chr6	42696599	42722574	chr6:42696599-42722574	3	-	42698294	42722334	789624	3	1908,247,821,	0,7765,25154,
#Partially deleted in new
chr6	42727233	42727700	chr6:42727233-42727700	7	+	42727233	42727233	16724991	1	467,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	42744480	42746096	chr6:42744480-42746096	3	-	42745032	42746073	0	1	1616,	0,
#Partially deleted in new
chr6	42746957	42868390	chr6:42746957-42868390	3	+	42822022	42865446	789624	15	66,89,70,96,46,49,69,1680,106,101,62,146,95,103,3732,	0,34881,35074,63348,75060,75838,75977,81535,105134,106680,108898,110133,113304,115552,117701,
#Partially deleted in new
chr6	42782026	42868560	chr6:42782026-42868560	1	+	42822022	42865446	789624	13	75,96,46,49,69,1680,106,101,62,146,95,103,3902,	0,28279,39991,40769,40908,46466,70065,71611,73829,75064,78235,80483,82632,
#Partially deleted in new
chr6	42821055	42868558	chr6:42821055-42868558	1	+	42822022	42865446	789624	12	158,46,49,69,1680,106,101,62,146,95,103,3900,	0,962,1740,1879,7437,31036,32582,34800,36035,39206,41454,43603,
#Partially deleted in new
chr6	42879617	42887301	chr6:42879617-42887301	0	+	42879910	42883547	789624	6	334,164,138,110,215,142,	0,3833,4995,6356,6638,7542,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	42879634	42889896	chr6:42879634-42889896	3	+	42879910	42886464	789624	6	317,106,164,138,110,3641,	0,1226,3816,4978,6339,6621,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	42879638	42887010	chr6:42879638-42887010	0	+	42879638	42879638	8553170	6	313,222,164,138,110,755,	0,1222,3812,4974,6335,6617,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	42879681	42889925	chr6:42879681-42889925	1	+	42879910	42886464	789624	7	270,106,164,138,110,215,2766,	0,1179,3769,4931,6292,6574,7478,
#Partially deleted in new
chr6	42879919	42883776	chr6:42879919-42883776	0	+	42879919	42879919	8553170	2	32,458,	0,3399,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	42879923	42881011	chr6:42879923-42881011	0	+	42879923	42879923	8553170	2	28,454,	0,634,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	42879928	42883008	chr6:42879928-42883008	0	+	42879928	42879928	8553170	2	23,2148,	0,932,
#Partially deleted in new
chr6	42879932	42886249	chr6:42879932-42886249	0	+	42879932	42886142	789624	5	19,106,164,138,276,	0,928,3518,4680,6041,
#Partially deleted in new
chr6	42880860	42886354	chr6:42880860-42886354	0	+	42880860	42880860	8553170	6	106,164,84,138,110,100,	0,2590,2997,3752,5113,5394,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	42885576	42887238	chr6:42885576-42887238	0	+	42885576	42885576	8553170	3	507,215,79,	0,679,1583,
#Deleted in new
chr6	42890264	42890816	chr6:42890264-42890816	3	-	42890482	42890788	789624	1	552,	0,
#Partially deleted in new
chr6	42915988	42925835	chr6:42915988-42925835	3	+	42916069	42925682	0	4	139,321,45,575,	0,7038,8240,9272,
#Partially deleted in new
chr6	42915988	42925835	chr6:42915988-42925835	1	+	42916069	42925682	0	5	139,43,203,45,575,	0,6229,7156,8240,9272,
#Partially deleted in new
chr6	42915988	42925835	chr6:42915988-42925835	1	+	42916069	42925682	0	3	139,45,575,	0,8240,9272,
#Partially deleted in new
chr6	42915988	42925835	chr6:42915988-42925835	1	+	42916069	42925682	789624	4	139,321,45,620,	0,7038,8240,9227,
#Partially deleted in new
chr6	42929191	42938170	chr6:42929191-42938170	1	+	42929570	42937777	789624	6	530,124,49,47,123,81,	0,5283,6382,6432,8525,8898,
#Partially deleted in new
chr6	42929199	42939287	chr6:42929199-42939287	3	+	42929570	42938791	789624	6	522,124,97,123,118,720,	0,5275,6374,8517,8890,9368,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	42940363	42943970	chr6:42940363-42943970	1	+	42940363	42940363	8553170	4	243,157,106,173,	0,409,1146,3434,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	42943739	42948360	chr6:42943739-42948360	3	+	42943739	42943739	8553170	2	231,753,	0,3868,
#Partially deleted in new
chr6	42956344	42956765	chr6:42956344-42956765	7	-	42956344	42956344	16724991	1	421,	0,
#Partially deleted in new
chr6	42960757	42963880	chr6:42960757-42963880	3	+	42960767	42963706	0	6	216,128,117,143,122,346,	0,1454,2004,2314,2570,2777,
#Partially deleted in new
chr6	42963869	42979220	chr6:42963869-42979220	3	-	42964334	42979150	789624	17	602,140,78,117,109,62,206,133,77,196,209,112,134,103,84,164,952,	0,920,1205,1382,1811,2174,2372,2655,2912,3498,4420,5004,5798,6015,10133,11005,14399,
#Partially deleted in new
chr6	42964334	42979150	chr6:42964334-42979150	1	-	42965687	42979150	789624	15	137,140,78,117,109,154,77,196,209,112,134,103,84,164,882,	0,455,740,917,1346,2169,2447,3033,3955,4539,5333,5550,9668,10540,13934,
#Partially deleted in new
chr6	42984498	43012342	chr6:42984498-43012342	3	+	42984677	43011286	789624	16	206,78,217,200,111,93,131,60,109,54,171,128,102,73,117,1194,	0,5112,21964,22412,22697,22915,23436,23702,23868,24194,24558,24823,25969,26165,26382,26650,
#Partially deleted in new
chr6	42984552	43012342	chr6:42984552-43012342	1	+	42984677	43011286	789624	16	152,78,144,177,111,93,131,60,109,54,171,128,102,73,117,1194,	0,5058,21910,22381,22643,22861,23382,23648,23814,24140,24504,24769,25915,26111,26328,26596,
#Partially deleted in new
chr6	42984553	43012340	chr6:42984553-43012340	1	+	42984677	43011286	789624	16	151,78,193,200,111,93,131,60,109,54,171,128,102,73,117,1192,	0,5057,21933,22357,22642,22860,23381,23647,23813,24139,24503,24768,25914,26110,26327,26595,
#Partially deleted in new
chr6	42984599	43012340	chr6:42984599-43012340	0	+	42984677	43006676	789624	16	105,78,234,200,111,93,131,60,109,54,171,128,102,73,117,1192,	0,5011,21846,22311,22596,22814,23335,23601,23767,24093,24457,24722,25868,26064,26281,26549,
#Partially deleted in new
chr6	42984651	43011327	chr6:42984651-43011327	1	+	42984677	43011286	789624	14	53,177,111,93,131,60,109,54,171,128,102,73,117,179,	0,22282,22544,22762,23283,23549,23715,24041,24405,24670,25816,26012,26229,26497,
#Partially deleted in new
chr6	43006599	43012340	chr6:43006599-43012340	0	+	43006599	43011286	789624	13	80,200,111,93,131,60,109,171,128,102,73,117,1192,	0,311,596,814,1335,1601,1767,2457,2722,3868,4064,4281,4549,
#Deleted in new
chr6	43007011	43008219	chr6:43007011-43008219	0	+	43007011	43007011	8553170	4	99,111,93,285,	0,184,402,923,
#Partially deleted in new
chr6	43008278	43010500	chr6:43008278-43010500	0	+	43008278	43008278	8553170	5	197,54,171,128,33,	0,414,778,1043,2189,
#Partially deleted in new
chr6	43009112	43010894	chr6:43009112-43010894	0	+	43009112	43010894	789624	5	115,128,102,103,14,	0,209,1355,1521,1768,
#Deleted in new
chr6	43011142	43013684	chr6:43011142-43013684	1	-	43012469	43013378	789624	3	1479,103,570,	0,1783,1972,
#Deleted in new
chr6	43012081	43013983	chr6:43012081-43013983	1	-	43012469	43013378	789624	4	540,103,275,86,	0,844,1033,1816,
#Deleted in new
chr6	43012093	43013968	chr6:43012093-43013968	1	-	43012469	43013813	789624	4	528,103,275,183,	0,832,1021,1692,
#Deleted in new
chr6	43012093	43014279	chr6:43012093-43014279	1	-	43012469	43014098	789624	4	528,103,275,218,	0,832,1021,1968,
#Partially deleted in new
chr6	43012093	43016866	chr6:43012093-43016866	1	-	43012469	43013378	789624	4	528,103,275,72,	0,832,1021,4701,
#Partially deleted in new
chr6	43012093	43016868	chr6:43012093-43016868	3	-	43012469	43013378	789624	4	528,103,275,449,	0,832,1021,4326,
#Partially deleted in new
chr6	43014102	43021298	chr6:43014102-43021298	1	+	43017650	43020733	789624	10	246,213,177,72,214,87,109,74,79,632,	0,3031,3416,4042,4240,4530,4760,4989,5185,6564,
#Partially deleted in new
chr6	43014212	43021298	chr6:43014212-43021298	3	+	43017192	43020733	789624	11	136,213,177,116,72,214,87,109,74,79,632,	0,2921,3306,3640,3932,4130,4420,4650,4879,5075,6454,
#Partially deleted in new
chr6	43014254	43021291	chr6:43014254-43021291	1	+	43017192	43021120	789624	12	94,213,177,116,72,214,87,109,74,79,59,200,	0,2879,3264,3598,3890,4088,4378,4608,4837,5033,6412,6837,
#Partially deleted in new
chr6	43021644	43029597	chr6:43021644-43029597	3	+	43021654	43029228	789624	7	140,148,67,105,75,118,506,	0,3340,3618,4392,5533,5715,7447,
#Partially deleted in new
chr6	43026072	43033971	chr6:43026072-43033971	0	+	43026072	43027150	789624	5	69,123,118,99,119,	0,1057,1287,3019,7780,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	43033151	43034156	chr6:43033151-43034156	0	+	43033151	43033151	8553170	1	1005,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	43033896	43034405	chr6:43033896-43034405	3	-	43033896	43033896	8553170	1	509,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	43036195	43036500	chr6:43036195-43036500	3	-	43036195	43036195	8553170	1	305,	0,
#Partially deleted in new
chr6	43037616	43053699	chr6:43037616-43053699	3	-	43037687	43052788	0	26	395,206,127,146,271,217,161,183,107,183,134,176,96,106,172,91,228,106,238,256,197,139,501,152,588,78,	0,650,949,1225,2539,2913,3298,5185,5457,5831,7135,7610,7970,8369,8619,8894,9263,10531,10715,11790,12346,12643,13351,13995,14592,16005,
#Partially deleted in new
chr6	43037619	43053945	chr6:43037619-43053945	1	-	43037687	43053858	0	26	392,206,127,146,271,217,161,183,107,183,134,176,96,106,172,91,228,106,238,256,197,139,501,152,684,235,	0,647,946,1222,2536,2910,3295,5182,5454,5828,7132,7607,7967,8366,8616,8891,9260,10528,10712,11787,12343,12640,13348,13992,14493,16091,
#Partially deleted in new
chr6	43040776	43075087	chr6:43040776-43075087	0	+	43061335	43063023	789624	18	348,451,246,281,283,262,82,220,88,102,174,100,71,109,141,116,64,466,	0,2281,18249,18628,20534,22109,24843,25529,26219,29577,29915,30498,31075,31370,32047,32446,33125,33845,
#Deleted in new
chr6	43045586	43048160	chr6:43045586-43048160	0	-	43045586	43045586	8553170	7	96,106,172,91,228,43,13,	0,399,649,924,1293,2360,2561,
#Partially deleted in new
chr6	43054028	43059806	chr6:43054028-43059806	3	-	43054273	43059381	0	7	458,74,111,116,139,169,521,	0,1516,1868,2052,2278,4036,5257,
#Partially deleted in new
chr6	43054231	43059394	chr6:43054231-43059394	1	-	43054439	43059381	789624	6	255,111,116,139,169,109,	0,1665,1849,2075,3833,5054,
#Partially deleted in new
chr6	43054231	43055717	chr6:43054231-43055717	0	-	43054231	43054231	8553170	2	255,173,	0,1313,
#Partially deleted in new
chr6	43054234	43059434	chr6:43054234-43059434	1	-	43054439	43059381	789624	3	252,169,149,	0,3830,5051,
#Partially deleted in new
chr6	43055544	43059368	chr6:43055544-43059368	0	-	43055544	43055544	8553170	5	74,300,139,169,83,	0,352,762,2520,3741,
#Partially deleted in new
chr6	43055615	43059416	chr6:43055615-43059416	0	-	43055615	43055615	8553170	4	581,139,169,131,	0,691,2449,3670,
#Partially deleted in new
chr6	43055891	43059406	chr6:43055891-43059406	0	-	43055891	43055891	8553170	5	116,116,139,169,121,	0,189,415,2173,3394,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	43057570	43059421	chr6:43057570-43059421	1	-	43058150	43059381	789624	2	663,242,	0,1609,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	43057697	43059438	chr6:43057697-43059438	1	-	43058038	43059381	789624	2	536,153,	0,1588,
#Partially deleted in new
chr6	43059593	43075099	chr6:43059593-43075099	3	+	43061335	43074672	789624	16	92,283,231,82,220,88,102,174,100,53,71,109,141,116,64,478,	0,1717,3323,6026,6712,7402,10760,11098,11681,11973,12258,12553,13230,13629,14308,15028,
#Partially deleted in new
chr6	43059630	43074908	chr6:43059630-43074908	1	+	43061335	43074672	789624	15	55,283,82,220,88,102,174,100,53,71,109,141,116,64,287,	0,1680,5989,6675,7365,10723,11061,11644,11936,12221,12516,13193,13592,14271,14991,
#Partially deleted in new
chr6	43059646	43066481	chr6:43059646-43066481	0	+	43062919	43066481	789624	4	39,231,82,176,	0,3270,5973,6659,
#Partially deleted in new
chr6	43059651	43067083	chr6:43059651-43067083	0	+	43061335	43067083	789624	6	34,283,165,82,220,88,	0,1659,3331,5968,6654,7344,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	43059652	43067397	chr6:43059652-43067397	1	+	43061335	43067152	789624	6	33,283,231,82,220,402,	0,1658,3264,5967,6653,7343,
#Partially deleted in new
chr6	43059856	43075093	chr6:43059856-43075093	1	+	43060209	43074672	789624	16	382,283,231,82,220,88,102,174,100,53,71,109,141,116,64,472,	0,1454,3060,5763,6449,7139,10497,10835,11418,11710,11995,12290,12967,13366,14045,14765,
#Deleted in new
chr6	43059882	43061583	chr6:43059882-43061583	0	+	43061335	43061583	789624	2	304,273,	0,1428,
#Partially deleted in new
chr6	43059882	43075089	chr6:43059882-43075089	1	+	43061335	43074672	789624	16	300,283,231,82,220,88,102,174,100,53,71,109,141,116,64,468,	0,1428,3034,5737,6423,7113,10471,10809,11392,11684,11969,12264,12941,13340,14019,14739,
#Deleted in new
chr6	43059886	43061587	chr6:43059886-43061587	0	+	43061335	43061587	789624	2	273,277,	0,1424,
#Partially deleted in new
chr6	43059889	43066458	chr6:43059889-43066458	0	+	43060209	43060347	789624	5	716,283,231,82,153,	0,1421,3027,5730,6416,
#Partially deleted in new
chr6	43059894	43075087	chr6:43059894-43075087	1	+	43061335	43074672	789624	17	382,88,283,231,82,220,88,102,174,100,53,71,109,141,116,64,466,	0,623,1416,3022,5725,6411,7101,10459,10797,11380,11672,11957,12252,12929,13328,14007,14727,
#Partially deleted in new
chr6	43061061	43062933	chr6:43061061-43062933	0	+	43061335	43062933	789624	2	532,17,	0,1855,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	43062527	43066356	chr6:43062527-43066356	0	+	43062527	43062527	8553170	3	620,82,51,	0,3092,3778,
#Deleted in new
chr6	43065391	43066522	chr6:43065391-43066522	0	+	43065391	43065391	8553170	2	310,217,	0,914,
#Partially deleted in new
chr6	43067079	43072963	chr6:43067079-43072963	0	+	43067079	43072191	789624	7	4,102,174,100,53,109,223,	0,3274,3612,4195,4487,5067,5661,
#Deleted in new
chr6	43070345	43072243	chr6:43070345-43072243	0	+	43070345	43070345	8553170	5	520,100,53,71,97,	0,929,1221,1506,1801,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	43072887	43073647	chr6:43072887-43073647	0	+	43072887	43072887	8553170	2	77,425,	0,335,
#Deleted in new
chr6	43073683	43075095	chr6:43073683-43075095	0	+	43073683	43073683	8553170	2	282,474,	0,938,
#Deleted in new
chr6	43074330	43074739	chr6:43074330-43074739	3	-	43074330	43074330	8553170	1	409,	0,
#Partially deleted in new
chr6	43076267	43161719	chr6:43076267-43161719	3	+	43076488	43160881	789624	20	300,288,103,191,151,149,267,134,136,120,150,151,128,204,156,233,81,152,179,999,	0,52709,53459,53962,54243,55748,56153,62581,62868,63138,65400,65663,65904,67149,68183,68932,70350,82549,83520,84453,
#Partially deleted in new
chr6	43076306	43129617	chr6:43076306-43129617	1	+	43076488	43129317	789624	2	261,641,	0,52670,
#Partially deleted in new
chr6	43076332	43161719	chr6:43076332-43161719	0	+	43076488	43130514	789624	19	235,288,103,151,149,267,134,136,120,150,151,128,204,156,233,81,152,179,999,	0,52644,53394,54178,55683,56088,62516,62803,63073,65335,65598,65839,67084,68118,68867,70285,82484,83455,84388,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	43076338	43133721	chr6:43076338-43133721	1	+	43076488	43132839	789624	7	229,288,103,191,151,149,1301,	0,52638,53388,53891,54172,55677,56082,
#Partially deleted in new
chr6	43076341	43161712	chr6:43076341-43161712	0	+	43076488	43146661	789624	19	226,288,103,191,151,149,267,134,136,120,150,151,128,204,156,81,152,179,992,	0,52635,53385,53888,54169,55674,56079,62507,62794,63064,65326,65589,65830,67075,68109,70276,82475,83446,84379,
#Partially deleted in new
chr6	43076341	43161712	chr6:43076341-43161712	1	+	43076488	43160881	789624	19	226,288,103,191,151,149,267,134,136,150,151,128,204,156,233,81,152,179,992,	0,52635,53385,53888,54169,55674,56079,62507,62794,65326,65589,65830,67075,68109,68858,70276,82475,83446,84379,
#Partially deleted in new
chr6	43076341	43161712	chr6:43076341-43161712	1	+	43076488	43160881	789624	17	226,288,103,191,151,149,267,150,151,128,204,156,233,81,152,179,992,	0,52635,53385,53888,54169,55674,56079,65326,65589,65830,67075,68109,68858,70276,82475,83446,84379,
#Partially deleted in new
chr6	43076341	43161712	chr6:43076341-43161712	1	+	43076488	43160881	789624	19	226,288,103,191,151,149,267,134,136,120,150,111,204,156,233,81,152,179,992,	0,52635,53385,53888,54169,55674,56079,62507,62794,63064,65326,65589,67075,68109,68858,70276,82475,83446,84379,
#Partially deleted in new
chr6	43076368	43161713	chr6:43076368-43161713	0	+	43076368	43076368	8553170	19	199,288,103,191,151,149,267,134,136,120,150,151,1449,156,233,81,152,179,993,	0,52608,53358,53861,54142,55647,56052,62480,62767,63037,65299,65562,65803,68082,68831,70249,82448,83419,84352,
#Partially deleted in new
chr6	43076813	43161010	chr6:43076813-43161010	1	+	43076883	43160881	789624	20	173,288,103,191,151,149,267,134,136,120,150,151,128,204,156,233,81,152,179,290,	0,52163,52913,53416,53697,55202,55607,62035,62322,62592,64854,65117,65358,66603,67637,68386,69804,82003,82974,83907,
#Partially deleted in new
chr6	43130590	43139243	chr6:43130590-43139243	0	+	43130590	43139243	789624	5	71,149,345,134,108,	0,1425,1830,8258,8545,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	43131713	43132551	chr6:43131713-43132551	0	+	43131713	43131713	8553170	2	451,131,	0,707,
#Partially deleted in new
chr6	43132525	43161719	chr6:43132525-43161719	0	+	43132525	43160881	789624	8	162,134,15,213,81,152,179,999,	0,6323,6610,12694,14092,26291,27262,28195,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	43138552	43141948	chr6:43138552-43141948	0	+	43138552	43138552	8553170	5	430,136,120,150,18,	0,583,853,3115,3378,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	43142347	43146164	chr6:43142347-43146164	0	+	43142347	43142347	8553170	2	1273,1714,	0,2103,
#Deleted in new
chr6	43142376	43145259	chr6:43142376-43145259	0	+	43142376	43142454	789624	4	126,204,156,60,	0,1040,2074,2823,
#Deleted in new
chr6	43142376	43145261	chr6:43142376-43145261	0	+	43142376	43142454	789624	4	122,236,156,62,	0,1008,2074,2823,
#Deleted in new
chr6	43142378	43145432	chr6:43142378-43145432	0	+	43142378	43142454	789624	4	120,204,156,233,	0,1038,2072,2821,
#Partially deleted in new
chr6	43144298	43159883	chr6:43144298-43159883	0	+	43144395	43159883	789624	5	308,233,81,152,96,	0,901,2319,14518,15489,
#Partially deleted in new
chr6	43144299	43161036	chr6:43144299-43161036	0	+	43144395	43146661	789624	5	307,81,152,179,316,	0,2318,14517,15488,16421,
#Partially deleted in new
chr6	43171298	43181507	chr6:43171298-43181507	3	+	43171656	43179190	0	7	871,267,262,120,192,77,2413,	0,2548,4407,5249,6995,7507,7796,
#Partially deleted in new
chr6	43182174	43224587	chr6:43182174-43224587	3	+	43184310	43224445	0	41	75,604,155,501,136,194,406,193,208,197,218,247,106,228,91,172,106,96,176,134,180,110,183,161,229,190,146,130,200,248,346,141,165,164,94,75,111,118,134,74,338,	0,2127,3281,3780,4785,5071,5538,6348,10826,13894,14470,16434,17091,17754,18261,18488,20541,20934,21242,21679,22185,22573,22758,23088,23832,24146,30974,31263,31538,32904,33983,38284,38572,38983,39510,40141,40356,40604,41089,41920,42075,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	43182183	43188958	chr6:43182183-43188958	0	+	43182183	43182183	8553170	5	66,604,155,501,1246,	0,2118,3272,3771,5529,
#Partially deleted in new
chr6	43182183	43224587	chr6:43182183-43224587	0	+	43182183	43182183	8553170	40	66,604,155,501,136,194,406,193,208,794,247,106,228,91,172,106,96,176,134,180,110,183,161,229,190,146,130,200,248,346,141,165,164,94,75,111,118,134,74,338,	0,2118,3272,3771,4776,5062,5529,6339,10817,13885,16425,17082,17745,18252,18479,20532,20925,21233,21670,22176,22564,22749,23079,23823,24137,30965,31254,31529,32895,33974,38275,38563,38974,39501,40132,40347,40595,41080,41911,42066,
#Partially deleted in new
chr6	43182184	43224585	chr6:43182184-43224585	1	+	43184310	43224445	789624	41	65,604,155,501,136,194,406,193,208,197,218,247,106,228,91,172,106,96,176,134,180,110,183,161,229,190,146,130,116,248,346,141,165,164,94,75,111,118,134,74,336,	0,2117,3271,3770,4775,5061,5528,6338,10816,13884,14460,16424,17081,17744,18251,18478,20531,20924,21232,21669,22175,22563,22748,23078,23822,24136,30964,31253,31612,32894,33973,38274,38562,38973,39500,40131,40346,40594,41079,41910,42065,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	43186927	43188958	chr6:43186927-43188958	0	+	43186927	43186927	8553170	2	168,1246,	0,785,
#Deleted in new
chr6	43203272	43204132	chr6:43203272-43204132	0	+	43203272	43203272	8553170	2	320,279,	0,581,
#Deleted in new
chr6	43204155	43205115	chr6:43204155-43205115	0	+	43204155	43204155	8553170	3	384,110,183,	0,592,777,
#Partially deleted in new
chr6	43205171	43213497	chr6:43205171-43213497	0	+	43205171	43205171	8553170	4	252,229,146,14,	0,835,7977,8312,
#Partially deleted in new
chr6	43206082	43215324	chr6:43206082-43215324	0	+	43206082	43213277	789624	5	153,146,130,200,246,	0,7066,7355,7630,8996,
#Partially deleted in new
chr6	43206353	43213705	chr6:43206353-43213705	0	+	43206353	43206353	8553170	3	157,146,268,	0,6795,7084,
#Partially deleted in new
chr6	43206380	43213852	chr6:43206380-43213852	0	+	43206380	43206380	8553170	4	130,146,130,150,	0,6768,7057,7322,
#Partially deleted in new
chr6	43212768	43215160	chr6:43212768-43215160	0	+	43212768	43212768	8553170	4	526,130,200,82,	0,669,944,2310,
#Partially deleted in new
chr6	43213647	43220481	chr6:43213647-43220481	0	+	43213647	43213647	8553170	4	265,248,346,23,	0,1431,2510,6811,
#Partially deleted in new
chr6	43213800	43223860	chr6:43213800-43223860	3	-	43213800	43213800	8553170	2	109,871,	0,9189,
#Partially deleted in new
chr6	43213822	43224585	chr6:43213822-43224585	0	+	43213822	43220480	789624	13	90,248,228,141,165,164,94,75,111,118,134,74,336,	0,1256,2335,6636,6924,7335,7862,8493,8708,8956,9441,10272,10427,
#Deleted in new
chr6	43220565	43221278	chr6:43220565-43221278	0	+	43220565	43220565	8553170	2	34,532,	0,181,
#Deleted in new
chr6	43221504	43224584	chr6:43221504-43224584	0	+	43221504	43221504	8553170	2	2664,335,	0,2745,
#Deleted in new
chr6	43221756	43222997	chr6:43221756-43222997	0	+	43221756	43221756	8553170	3	22,75,467,	0,559,774,
#Deleted in new
chr6	43223239	43224584	chr6:43223239-43224584	0	+	43223239	43223239	8553170	3	158,74,335,	0,855,1010,
#Partially deleted in new
chr6	43225628	43229484	chr6:43225628-43229484	3	-	43225732	43229456	0	4	253,111,69,224,	0,404,698,3632,
#Partially deleted in new
chr6	43225630	43229453	chr6:43225630-43229453	0	-	43225732	43229453	789624	4	251,111,69,403,	0,402,696,3420,
#Partially deleted in new
chr6	43225634	43229478	chr6:43225634-43229478	1	-	43225961	43229456	0	3	509,69,218,	0,692,3626,
#Deleted in new
chr6	43226048	43226627	chr6:43226048-43226627	0	-	43226048	43226048	8553170	2	95,301,	0,278,
#Partially deleted in new
chr6	43243679	43288259	chr6:43243679-43288259	3	+	43246660	43285376	0	15	29,162,148,74,141,105,66,93,126,155,232,176,562,1586,3277,	0,2927,9059,9611,9888,10867,11369,11872,12051,14132,15358,15851,19109,39047,41303,
#Partially deleted in new
chr6	43247988	43272626	chr6:43247988-43272626	1	+	43252783	43269951	789624	13	117,148,74,141,105,66,93,126,155,232,176,562,2984,	0,4750,5302,5579,6558,7060,7563,7742,9823,11049,11542,14800,21654,
#Partially deleted in new
chr6	43295693	43299520	chr6:43295693-43299520	0	+	43295693	43295693	8553170	3	135,132,429,	0,2926,3398,
#Partially deleted in new
chr6	43295790	43301692	chr6:43295790-43301692	0	+	43295790	43295790	8553170	8	38,132,6,104,164,169,124,110,	0,2829,3301,3599,3836,4107,5344,5792,
#Deleted in new
chr6	43297997	43300066	chr6:43297997-43300066	0	+	43299268	43300066	789624	6	94,132,183,104,164,169,	0,622,1094,1392,1629,1900,
#Deleted in new
chr6	43298260	43299781	chr6:43298260-43299781	0	+	43298358	43299781	789624	4	491,183,104,155,	0,831,1129,1366,
#Deleted in new
chr6	43298260	43300188	chr6:43298260-43300188	0	+	43298260	43298260	8553170	4	491,402,155,291,	0,831,1366,1637,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	43298263	43305538	chr6:43298263-43305538	3	+	43298358	43304725	789624	11	488,6,104,155,169,124,110,215,109,207,868,	0,828,1126,1363,1634,2871,3319,3936,4391,5774,6407,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	43298263	43305538	chr6:43298263-43305538	1	+	43298358	43304725	789624	10	488,104,155,169,124,110,215,109,207,868,	0,1126,1363,1634,2871,3319,3936,4391,5774,6407,
#Partially deleted in new
chr6	43298358	43304480	chr6:43298358-43304480	1	+	43298358	43304278	789624	9	393,104,155,169,124,110,215,109,443,	0,1031,1268,1539,2776,3224,3841,4296,5679,
#Partially deleted in new
chr6	43299709	43307876	chr6:43299709-43307876	0	-	43299808	43307876	789624	5	107,58,95,132,38,	0,6357,6509,7902,8129,
#Partially deleted in new
chr6	43301528	43304207	chr6:43301528-43304207	0	+	43301552	43304207	789624	4	164,215,109,170,	0,671,1126,2509,
#Partially deleted in new
chr6	43305471	43308797	chr6:43305471-43308797	3	-	43305813	43308792	789624	8	404,58,95,72,132,58,95,48,	0,595,747,974,2140,2367,2843,3278,
#Deleted in new
chr6	43305512	43306461	chr6:43305512-43306461	0	-	43305869	43306461	789624	3	363,95,16,	0,706,933,
#Deleted in new
chr6	43305716	43306643	chr6:43305716-43306643	0	-	43305716	43305716	8553170	3	159,58,425,	0,350,502,
#Partially deleted in new
chr6	43305824	43308797	chr6:43305824-43308797	1	-	43305965	43308792	789624	7	300,95,72,132,58,95,48,	0,394,621,1787,2014,2490,2925,
#Deleted in new
chr6	43306226	43307129	chr6:43306226-43307129	0	-	43306226	43306226	8553170	2	87,684,	0,219,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	43307133	43331856	chr6:43307133-43331856	0	-	43307133	43307133	8553170	4	763,95,168,159,	0,1181,11168,24564,
#Deleted in new
chr6	43307502	43308788	chr6:43307502-43308788	0	-	43307502	43307502	8553170	3	241,58,474,	0,336,812,
#Deleted in new
chr6	43310230	43310357	chr6:43310230-43310357	7	+	43310230	43310230	16724991	1	127,	0,
#Partially deleted in new
chr6	43311132	43369478	chr6:43311132-43369478	0	-	43331774	43369365	789624	10	124,168,155,204,302,100,1482,640,149,512,	0,7169,20565,31543,37191,41244,43531,45993,54159,57834,
#Deleted in new
chr6	43328133	43328476	chr6:43328133-43328476	7	+	43328133	43328133	16724991	1	343,	0,
#Partially deleted in new
chr6	43331488	43342836	chr6:43331488-43342836	0	-	43331774	43342836	789624	2	364,161,	0,11187,
#Partially deleted in new
chr6	43336069	43369443	chr6:43336069-43369443	3	-	43337157	43369365	789624	10	4433,119,100,204,302,100,1482,640,149,477,	0,4720,6042,6606,12254,16307,18594,21056,29222,32897,
#Deleted in new
chr6	43363478	43364219	chr6:43363478-43364219	7	+	43363478	43363478	16724991	1	741,	0,
#Deleted in new
chr6	43364219	43364294	chr6:43364219-43364294	7	+	43364219	43364219	16724991	1	75,	0,
#Partially deleted in new
chr6	43427365	43441897	chr6:43427365-43441897	0	+	43433312	43441897	789624	8	24,126,228,157,110,80,172,36,	0,5869,7255,8385,8772,10568,11258,14496,
#Partially deleted in new
chr6	43427553	43450430	chr6:43427553-43450430	1	+	43427978	43450091	789624	22	204,172,1219,228,157,110,80,172,99,190,78,195,151,190,344,170,161,254,146,98,113,502,	0,414,4588,7067,8197,8584,10380,11070,14308,15416,16379,16605,17234,17571,18045,18723,19694,20130,21327,21553,21868,22375,
#Partially deleted in new
chr6	43427855	43435156	chr6:43427855-43435156	0	+	43427855	43427855	8553170	3	112,126,536,	0,5379,6765,
#Partially deleted in new
chr6	43431750	43450425	chr6:43431750-43450425	3	+	43432109	43450091	789624	20	1610,228,157,155,80,172,99,190,78,195,151,190,344,170,161,254,146,98,113,497,	0,2870,4000,4342,6183,6873,10111,11219,12182,12408,13037,13374,13848,14526,15497,15933,17130,17356,17671,18178,
#Deleted in new
chr6	43434541	43434620	chr6:43434541-43434620	3	+	43434541	43434541	5263520	1	79,	0,
#Partially deleted in new
chr6	43435797	43450426	chr6:43435797-43450426	0	+	43435797	43435797	8553170	16	110,110,862,99,1041,195,151,190,344,170,161,254,146,98,113,498,	0,340,2136,6064,7172,8361,8990,9327,9801,10479,11450,11886,13083,13309,13624,14131,
#Partially deleted in new
chr6	43438710	43442061	chr6:43438710-43442061	0	+	43438710	43438710	8553170	2	85,200,	0,3151,
#Partially deleted in new
chr6	43445099	43447437	chr6:43445099-43447437	0	+	43445099	43445099	8553170	2	215,190,	0,2148,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	43446854	43447862	chr6:43446854-43447862	0	+	43446854	43446854	8553170	2	554,179,	0,829,
#Deleted in new
chr6	43447992	43450422	chr6:43447992-43450422	0	+	43447992	43450091	789624	3	114,113,494,	0,1429,1936,
#Partially deleted in new
chr6	43450351	43455590	chr6:43450351-43455590	1	-	43450538	43454825	789624	6	923,145,113,64,131,196,	0,1588,2671,4059,4398,5043,
#Partially deleted in new
chr6	43450351	43455590	chr6:43450351-43455590	1	-	43450538	43454825	789624	6	923,145,131,64,131,196,	0,1588,2653,4059,4398,5043,
#Partially deleted in new
chr6	43450351	43453085	chr6:43450351-43453085	0	-	43450538	43453085	789624	3	923,52,81,	0,1588,2653,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	43450353	43456632	chr6:43450353-43456632	3	-	43450538	43454825	789624	6	921,145,131,64,131,646,	0,1586,2651,4057,4396,5633,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	43474185	43474292	chr6:43474185-43474292	3	+	43474185	43474185	8553170	1	107,	0,
#Partially deleted in new
chr6	43477522	43506556	chr6:43477522-43506556	1	+	43499001	43505855	789624	11	106,146,60,97,123,29,162,67,108,84,1796,	0,564,1136,20358,21455,23221,24003,24760,25878,26100,27238,
#Partially deleted in new
chr6	43477522	43506556	chr6:43477522-43506556	1	+	43499001	43505855	789624	11	106,146,97,126,29,162,67,30,108,84,1796,	0,564,20358,21452,23221,24003,24760,25065,25878,26100,27238,
#Partially deleted in new
chr6	43477522	43506556	chr6:43477522-43506556	3	+	43499001	43505855	789624	9	106,97,123,29,162,67,108,84,1796,	0,20358,21455,23221,24003,24760,25878,26100,27238,
#Partially deleted in new
chr6	43477568	43502293	chr6:43477568-43502293	0	+	43499001	43502293	789624	7	60,96,97,126,29,162,11,	0,568,20312,21406,23175,23957,24714,
#Partially deleted in new
chr6	43477572	43506553	chr6:43477572-43506553	1	+	43499001	43505855	789624	10	56,146,97,178,29,162,67,108,84,1793,	0,514,20308,21350,23171,23953,24710,25828,26050,27188,
#Partially deleted in new
chr6	43477572	43506553	chr6:43477572-43506553	1	+	43499001	43505855	789624	11	56,146,97,123,29,162,67,30,108,84,1793,	0,514,20308,21405,23171,23953,24710,25015,25828,26050,27188,
#Partially deleted in new
chr6	43477572	43506553	chr6:43477572-43506553	1	+	43499001	43505855	789624	10	56,146,97,123,29,162,67,108,84,1793,	0,514,20308,21405,23171,23953,24710,25828,26050,27188,
#Partially deleted in new
chr6	43477572	43503706	chr6:43477572-43503706	0	+	43499001	43503706	789624	10	60,146,97,126,29,162,67,30,108,84,	0,514,20308,21402,23171,23953,24710,25015,25828,26050,
#Partially deleted in new
chr6	43489583	43506556	chr6:43489583-43506556	1	+	43499001	43505855	789624	10	220,97,123,29,162,67,30,108,84,1796,	0,8297,9394,11160,11942,12699,13004,13817,14039,15177,
#Partially deleted in new
chr6	43489614	43506553	chr6:43489614-43506553	0	+	43489614	43489614	8553170	9	189,97,126,29,162,67,921,84,1793,	0,8266,9360,11129,11911,12668,12973,14008,15146,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	43496987	43506553	chr6:43496987-43506553	1	+	43499001	43500776	789624	9	990,123,944,67,30,108,1045,900,105,	0,1990,3756,5295,5600,6413,6635,7773,9461,
#Partially deleted in new
chr6	43499019	43503706	chr6:43499019-43503706	0	+	43499019	43499019	8553170	6	81,164,162,67,108,84,	0,1589,2506,3263,4381,4603,
#Partially deleted in new
chr6	43499096	43503696	chr6:43499096-43503696	0	+	43499096	43499096	8553170	6	40,29,162,67,108,74,	0,1647,2429,3186,4304,4526,
#Partially deleted in new
chr6	43500965	43503667	chr6:43500965-43503667	0	+	43500965	43500965	8553170	4	722,67,108,45,	0,1317,2435,2657,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	43501525	43506553	chr6:43501525-43506553	0	+	43501525	43504003	789624	4	162,67,108,2931,	0,757,1875,2097,
#Deleted in new
chr6	43506968	43510686	chr6:43506968-43510686	3	-	43507237	43509785	789624	6	340,223,101,123,161,1173,	0,487,857,1329,1791,2545,
#Partially deleted in new
chr6	43509701	43520310	chr6:43509701-43520310	0	+	43519356	43520310	789624	6	107,72,108,133,120,36,	0,7604,9631,10004,10364,10573,
#Partially deleted in new
chr6	43509970	43521387	chr6:43509970-43521387	1	+	43519356	43521300	789624	10	33,129,72,108,133,120,153,150,117,206,	0,3014,7335,9362,9735,10095,10304,10654,10961,11211,
#Partially deleted in new
chr6	43511826	43516990	chr6:43511826-43516990	3	-	43512166	43516807	789624	9	489,124,114,132,93,46,107,207,264,	0,613,934,1242,1532,1761,3768,4062,4900,
#Partially deleted in new
chr6	43511839	43516985	chr6:43511839-43516985	0	-	43516076	43516807	789624	9	476,124,114,132,93,46,96,299,259,	0,600,921,1229,1519,1748,3766,4049,4887,
#Partially deleted in new
chr6	43511927	43516941	chr6:43511927-43516941	1	-	43512166	43516807	789624	9	388,124,114,132,93,46,107,225,215,	0,512,833,1141,1431,1660,3667,3961,4799,
#Partially deleted in new
chr6	43512158	43516972	chr6:43512158-43516972	0	-	43516076	43516807	789624	9	157,124,114,132,93,46,107,302,246,	0,281,602,910,1200,1429,3436,3730,4568,
#Deleted in new
chr6	43512219	43513192	chr6:43512219-43513192	0	-	43512219	43512219	8553170	3	96,124,432,	0,220,541,
#Partially deleted in new
chr6	43512454	43516953	chr6:43512454-43516953	0	-	43512454	43516807	789624	8	109,114,30,93,46,107,207,227,	0,306,614,904,1133,3140,3434,4272,
#Deleted in new
chr6	43512457	43513838	chr6:43512457-43513838	0	-	43512457	43512457	8553170	4	106,114,383,251,	0,303,611,1130,
#Partially deleted in new
chr6	43512465	43516933	chr6:43512465-43516933	0	-	43516076	43516807	789624	3	1168,299,207,	0,3423,4261,
#Deleted in new
chr6	43512534	43513231	chr6:43512534-43513231	0	-	43512534	43512534	8553170	3	29,114,163,	0,226,534,
#Partially deleted in new
chr6	43512760	43516919	chr6:43512760-43516919	0	-	43515989	43516807	789624	7	114,132,93,46,107,158,193,	0,308,598,827,2834,3128,3966,
#Partially deleted in new
chr6	43512762	43516942	chr6:43512762-43516942	0	-	43516076	43516807	789624	7	112,132,93,46,107,299,216,	0,306,596,825,2832,3126,3964,
#Deleted in new
chr6	43512827	43513721	chr6:43512827-43513721	0	-	43512827	43512827	8553170	4	47,132,93,134,	0,241,531,760,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	43513141	43515688	chr6:43513141-43515688	0	-	43513141	43515688	789624	5	59,93,46,114,94,	0,217,446,2051,2453,
#Partially deleted in new
chr6	43513213	43515647	chr6:43513213-43515647	0	-	43513213	43513213	8553170	3	238,46,53,	0,374,2381,
#Partially deleted in new
chr6	43513448	43516391	chr6:43513448-43516391	0	-	43513448	43513448	8553170	3	185,107,503,	0,2146,2440,
#Partially deleted in new
chr6	43513595	43516614	chr6:43513595-43516614	0	-	43513595	43516071	789624	4	38,107,302,119,	0,1999,2293,2900,
#Deleted in new
chr6	43515536	43516959	chr6:43515536-43516959	0	-	43515536	43515536	8553170	3	165,207,233,	0,352,1190,
#Partially deleted in new
chr6	43517021	43521526	chr6:43517021-43521526	3	+	43517109	43521300	789624	9	157,72,108,133,120,153,150,117,345,	0,284,2311,2684,3044,3253,3603,3910,4160,
#Partially deleted in new
chr6	43517053	43521479	chr6:43517053-43521479	0	+	43517053	43517053	8553170	6	125,72,108,722,150,548,	0,252,2279,2652,3571,3878,
#Partially deleted in new
chr6	43517082	43519733	chr6:43517082-43519733	0	+	43517082	43517082	8553170	3	96,72,401,	0,223,2250,
#Partially deleted in new
chr6	43517087	43521506	chr6:43517087-43521506	1	+	43517109	43521300	789624	8	91,72,108,133,120,153,117,325,	0,218,2245,2618,2978,3187,3844,4094,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	43517088	43529585	chr6:43517088-43529585	1	+	43517109	43529355	789624	9	90,72,108,133,120,153,150,117,337,	0,217,2244,2617,2977,3186,3536,3843,12160,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	43517088	43562419	chr6:43517088-43562419	1	+	43517109	43529355	789624	11	90,72,108,133,120,153,150,117,111,44,1020,	0,217,2244,2617,2977,3186,3536,3843,12160,33879,44311,
#Partially deleted in new
chr6	43517088	43521513	chr6:43517088-43521513	1	+	43517109	43521300	789624	9	90,72,108,133,120,153,150,117,332,	0,217,2244,2617,2977,3186,3536,3843,4093,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	43517088	43529404	chr6:43517088-43529404	1	+	43517109	43521300	789624	9	90,72,108,133,120,153,117,136,156,	0,217,2244,2617,2977,3186,3843,4093,12160,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	43517088	43562242	chr6:43517088-43562242	1	+	43517109	43561509	789624	9	90,72,108,133,120,153,150,117,843,	0,217,2244,2617,2977,3186,3536,3843,44311,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	43517088	43556107	chr6:43517088-43556107	0	+	43517109	43550969	789624	11	90,72,108,133,120,153,150,117,44,311,1146,	0,217,2244,2617,2977,3186,3536,3843,33879,36296,37873,
#Partially deleted in new
chr6	43517096	43521513	chr6:43517096-43521513	0	+	43517109	43520072	789624	9	82,72,108,200,120,153,150,117,332,	0,209,2236,2609,2969,3178,3528,3835,4085,
#Partially deleted in new
chr6	43517097	43520703	chr6:43517097-43520703	0	+	43517097	43517097	8553170	6	81,72,108,480,153,79,	0,208,2235,2608,3177,3527,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	43517105	43562391	chr6:43517105-43562391	1	+	43517109	43550969	789624	10	73,72,108,133,120,153,150,117,44,992,	0,200,2227,2600,2960,3169,3519,3826,33862,44294,
#Partially deleted in new
chr6	43517111	43520312	chr6:43517111-43520312	0	+	43517111	43520312	789624	5	67,72,108,133,38,	0,194,2221,2594,3163,
#Partially deleted in new
chr6	43517132	43521494	chr6:43517132-43521494	0	+	43517132	43517132	8553170	5	46,72,108,1343,313,	0,173,2200,2573,4049,
#Deleted in new
chr6	43519179	43519724	chr6:43519179-43519724	3	-	43519179	43519179	8553170	1	545,	0,
#Partially deleted in new
chr6	43522329	43576075	chr6:43522329-43576075	3	-	43523867	43575864	0	32	1676,165,138,108,83,63,98,47,98,137,97,101,182,100,200,90,42,156,131,129,91,126,84,100,77,186,27,183,138,73,122,316,	0,2141,2501,2777,3509,4355,5304,5829,6498,8358,9149,11577,24241,25278,25931,27159,27563,28968,31043,33506,36171,37848,38594,39917,43330,44839,46381,48172,48527,50176,51150,53430,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	43522336	43526625	chr6:43522336-43526625	0	-	43522336	43522336	8553170	3	1669,165,1795,	0,2134,2494,
#Partially deleted in new
chr6	43524476	43527064	chr6:43524476-43527064	0	-	43524476	43524476	8553170	5	159,138,108,83,380,	0,354,630,1362,2208,
#Partially deleted in new
chr6	43524533	43528913	chr6:43524533-43528913	0	-	43524533	43528913	789624	8	102,138,108,116,63,98,47,86,	0,297,573,1305,2151,3100,3625,4294,
#Partially deleted in new
chr6	43524533	43528204	chr6:43524533-43528204	0	-	43525909	43528204	789624	7	102,138,108,83,63,61,46,	0,297,573,1305,2151,3137,3625,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	43527185	43528867	chr6:43527185-43528867	0	-	43527185	43527185	8553170	3	546,47,40,	0,973,1642,
#Partially deleted in new
chr6	43528158	43547675	chr6:43528158-43547675	0	-	43547447	43547675	789624	8	47,98,137,97,101,182,138,68,	0,669,2529,3320,5748,18412,19157,19449,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	43533352	43547681	chr6:43533352-43547681	0	-	43533352	43533352	8553170	3	655,182,74,	0,13218,14255,
#Deleted in new
chr6	43538821	43539703	chr6:43538821-43539703	7	-	43538821	43538821	16724991	1	882,	0,
#Deleted in new
chr6	43544143	43544270	chr6:43544143-43544270	3	+	43544143	43544143	8553170	1	127,	0,
#Deleted in new
chr6	43547685	43548470	chr6:43547685-43548470	0	-	43547685	43547685	8553170	2	22,210,	0,575,
#Partially deleted in new
chr6	43549533	43562333	chr6:43549533-43562333	0	-	43555937	43562333	789624	8	45,42,156,131,129,126,84,87,	0,359,1764,3839,6302,10644,11390,12713,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	43551323	43559062	chr6:43551323-43559062	0	-	43551323	43551323	8553170	5	130,131,129,91,143,	0,2049,4512,7177,7596,
#Partially deleted in new
chr6	43570929	43575985	chr6:43570929-43575985	0	-	43573475	43575864	789624	4	65,73,204,226,	0,1576,2468,4830,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	43576149	43615660	chr6:43576149-43615660	3	+	43582319	43614557	0	11	291,141,135,218,170,104,120,124,66,170,2001,	0,6166,6857,11122,21546,24838,27742,28465,29104,34404,37510,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	43576296	43615660	chr6:43576296-43615660	1	+	43582319	43613731	0	11	144,141,135,218,170,104,120,124,66,170,1930,	0,6019,6710,10975,21399,24691,27595,28318,28957,34257,37434,
#Partially deleted in new
chr6	43576373	43587400	chr6:43576373-43587400	0	+	43583055	43587400	789624	3	67,135,129,	0,6633,10898,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	43588229	43591362	chr6:43588229-43591362	3	-	43588229	43588229	8553170	2	517,473,	0,2660,
#Partially deleted in new
chr6	43605315	43622167	chr6:43605315-43622167	0	-	43620249	43622167	789624	4	67,215,69,165,	0,14803,16406,16687,
#Partially deleted in new
chr6	43620481	43627353	chr6:43620481-43627353	1	-	43621613	43626359	789624	12	1309,165,172,59,136,220,175,198,109,185,27,75,	0,1521,2151,3255,3451,4028,4406,4881,5274,5744,6440,6797,
#Partially deleted in new
chr6	43620489	43629162	chr6:43620489-43629162	3	-	43621613	43629162	789624	12	1301,165,172,59,136,220,175,198,109,185,27,186,	0,1513,2143,3247,3443,4020,4398,4873,5266,5736,6432,8487,
#Deleted in new
chr6	43620489	43622804	chr6:43620489-43622804	0	-	43621423	43622804	789624	4	1027,30,165,172,	0,1271,1513,2143,
#Deleted in new
chr6	43620489	43622804	chr6:43620489-43622804	0	-	43621876	43622804	789624	2	1678,172,	0,2143,
#Partially deleted in new
chr6	43620489	43627017	chr6:43620489-43627017	0	-	43620489	43620489	8553170	11	1301,165,172,59,136,220,175,198,109,185,96,	0,1513,2143,3247,3443,4020,4398,4873,5266,5736,6432,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	43622950	43623795	chr6:43622950-43623795	0	-	43622950	43622950	8553170	2	662,59,	0,786,
#Partially deleted in new
chr6	43624560	43628871	chr6:43624560-43628871	0	-	43624560	43628871	789624	7	169,175,198,109,185,27,83,	0,327,802,1195,1665,2361,4228,
#Deleted in new
chr6	43624613	43625864	chr6:43624613-43625864	0	-	43624613	43624613	8553170	3	116,673,109,	0,274,1142,
#Partially deleted in new
chr6	43625362	43629162	chr6:43625362-43629162	0	-	43625362	43629162	789624	5	198,109,161,27,186,	0,393,863,1559,3614,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	43629539	43640919	chr6:43629539-43640919	1	+	43629749	43640533	0	4	230,122,266,899,	0,3654,6841,10481,
#Partially deleted in new
chr6	43635818	43640952	chr6:43635818-43640952	3	+	43635875	43640533	0	3	103,266,932,	0,562,4202,
#Deleted in new
chr6	43635858	43636873	chr6:43635858-43636873	0	+	43635858	43635858	8553170	2	63,493,	0,522,
#Partially deleted in new
chr6	43645045	43672599	chr6:43645045-43672599	3	+	43645098	43670949	789624	5	280,166,130,147,1811,	0,5329,10516,11531,25743,
#Partially deleted in new
chr6	43645045	43672599	chr6:43645045-43672599	1	+	43645098	43670987	789624	6	280,166,85,147,97,1811,	0,5329,10561,11531,21378,25743,
#Partially deleted in new
chr6	43671302	43687791	chr6:43671302-43687791	3	-	43671761	43687779	0	6	604,70,124,108,32,124,	0,3899,4191,7215,9786,16365,
#Partially deleted in new
chr6	43671509	43687791	chr6:43671509-43687791	1	-	43671898	43687779	0	5	397,124,108,32,124,	0,3984,7008,9579,16158,
#Partially deleted in new
chr6	43671783	43687791	chr6:43671783-43687791	0	-	43671783	43687779	789624	5	123,416,108,32,124,	0,3418,6734,9305,15884,
#Deleted in new
chr6	43705948	43706751	chr6:43705948-43706751	7	-	43705948	43705948	16724991	1	803,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	43722785	43737834	chr6:43722785-43737834	3	-	43722785	43722785	8553170	3	174,75,99,	0,6432,14950,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	43770183	43778764	chr6:43770183-43778764	0	+	43770183	43770183	8553170	4	1129,52,197,305,	0,4157,7285,8276,
#Partially deleted in new
chr6	43770212	43786487	chr6:43770212-43786487	1	+	43770706	43784562	789624	7	1100,52,197,77,30,132,1947,	0,4128,7256,8247,8676,11743,14328,
#Deleted in new
chr6	43770428	43770616	chr6:43770428-43770616	3	-	43770428	43770428	8553170	1	188,	0,
#Partially deleted in new
chr6	43770706	43784562	chr6:43770706-43784562	1	+	43770706	43784562	789624	5	606,52,197,77,22,	0,3634,6762,7753,13834,
#Partially deleted in new
chr6	43770706	43784609	chr6:43770706-43784609	3	+	43770706	43784562	789624	8	606,52,197,77,30,123,132,69,	0,3634,6762,7753,8182,10025,11249,13834,
#Partially deleted in new
chr6	43770706	43786487	chr6:43770706-43786487	1	+	43770706	43784562	789624	6	606,52,197,77,30,1947,	0,3634,6762,7753,8182,13834,
#Partially deleted in new
chr6	43770706	43784589	chr6:43770706-43784589	1	+	43770706	43784562	789624	8	606,52,197,77,30,54,132,49,	0,3634,6762,7753,8182,10025,11249,13834,
#Partially deleted in new
chr6	43770706	43784562	chr6:43770706-43784562	1	+	43770706	43784546	789624	7	606,52,197,77,30,97,22,	0,3634,6762,7753,8182,11249,13834,
#Partially deleted in new
chr6	43770706	43784949	chr6:43770706-43784949	1	+	43770706	43784562	789624	8	606,52,197,77,30,72,132,409,	0,3634,6762,7753,8182,10025,11249,13834,
#Partially deleted in new
chr6	43770706	43784658	chr6:43770706-43784658	1	+	43770706	43784628	789624	7	606,52,197,77,30,132,52,	0,3634,6762,7753,8182,11249,13900,
#Partially deleted in new
chr6	43770706	43784562	chr6:43770706-43784562	1	+	43770706	43784562	0	8	606,52,197,77,30,123,132,22,	0,3634,6762,7753,8182,10025,11249,13834,
#Partially deleted in new
chr6	43770706	43784562	chr6:43770706-43784562	1	+	43770706	43784562	0	6	606,52,197,77,30,22,	0,3634,6762,7753,8182,13834,
#Partially deleted in new
chr6	43770706	43784628	chr6:43770706-43784628	1	+	43770706	43784628	0	7	606,52,197,77,30,132,22,	0,3634,6762,7753,8182,11249,13900,
#Partially deleted in new
chr6	43770706	43784562	chr6:43770706-43784562	1	+	43770706	43784562	0	7	606,52,197,77,30,132,22,	0,3634,6762,7753,8182,11249,13834,
#Partially deleted in new
chr6	43770706	43784546	chr6:43770706-43784546	1	+	43770706	43784546	0	7	606,52,197,77,30,97,6,	0,3634,6762,7753,8182,11249,13834,
#Partially deleted in new
chr6	43770706	43784562	chr6:43770706-43784562	1	+	43770706	43784562	0	8	606,52,197,77,30,72,132,22,	0,3634,6762,7753,8182,10025,11249,13834,
#Partially deleted in new
chr6	43770706	43784562	chr6:43770706-43784562	1	+	43770706	43784562	0	8	606,52,197,77,30,54,132,22,	0,3634,6762,7753,8182,10025,11249,13834,
#Partially deleted in new
chr6	43770781	43786487	chr6:43770781-43786487	1	+	43771246	43784562	0	6	531,52,197,77,30,1947,	0,3559,6687,7678,8107,13759,
#Partially deleted in new
chr6	43770792	43784562	chr6:43770792-43784562	0	+	43770792	43784562	789624	7	520,52,197,77,30,72,22,	0,3548,6676,7667,8096,9939,13748,
#Partially deleted in new
chr6	43771082	43784949	chr6:43771082-43784949	1	+	43771246	43784562	0	8	230,52,197,77,30,72,132,409,	0,3258,6386,7377,7806,9649,10873,13458,
#Partially deleted in new
chr6	43771152	43778937	chr6:43771152-43778937	0	+	43771152	43771152	8553170	5	160,52,197,77,49,	0,3188,6316,7307,7736,
#Partially deleted in new
chr6	43771208	43784609	chr6:43771208-43784609	1	+	43771246	43784562	0	8	104,52,197,77,30,123,132,69,	0,3132,6260,7251,7680,9523,10747,13332,
#Partially deleted in new
chr6	43771208	43784902	chr6:43771208-43784902	1	+	43771246	43784562	0	7	104,52,197,77,30,132,362,	0,3132,6260,7251,7680,10747,13332,
#Partially deleted in new
chr6	43771246	43784562	chr6:43771246-43784562	1	+	43771246	43784562	0	5	66,52,197,77,22,	0,3094,6222,7213,13294,
#Partially deleted in new
chr6	43771246	43777825	chr6:43771246-43777825	0	+	43771246	43771246	8553170	3	66,52,357,	0,3094,6222,
#Partially deleted in new
chr6	43771246	43784562	chr6:43771246-43784562	1	+	43771246	43784562	0	8	66,52,197,77,30,54,132,22,	0,3094,6222,7213,7642,9485,10709,13294,
#Partially deleted in new
chr6	43771246	43784658	chr6:43771246-43784658	1	+	43771246	43784628	0	7	66,52,197,77,30,132,52,	0,3094,6222,7213,7642,10709,13360,
#Partially deleted in new
chr6	43771246	43784562	chr6:43771246-43784562	1	+	43771246	43784546	0	7	66,52,197,77,30,97,22,	0,3094,6222,7213,7642,10709,13294,
#Partially deleted in new
chr6	43771991	43784935	chr6:43771991-43784935	1	+	43774358	43784562	789624	7	110,52,197,77,30,132,395,	0,2349,5477,6468,6897,9964,12549,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	43773171	43786484	chr6:43773171-43786484	0	+	43773171	43773171	8553170	3	4494,77,7596,	0,5288,5717,
#Partially deleted in new
chr6	43774352	43784562	chr6:43774352-43784562	0	+	43774352	43784562	789624	4	40,197,77,22,	0,3116,7658,10188,
#Partially deleted in new
chr6	43777719	43786439	chr6:43777719-43786439	0	+	43777719	43777719	8553170	3	817,30,1899,	0,1169,6821,
#Partially deleted in new
chr6	43778171	43784564	chr6:43778171-43784564	0	+	43778171	43778171	8553170	4	365,30,132,24,	0,717,3784,6369,
#Partially deleted in new
chr6	43803192	43842625	chr6:43803192-43842625	3	+	43803192	43803192	8553170	3	157,208,115,	0,958,39318,
#Partially deleted in new
chr6	43844877	43852317	chr6:43844877-43852317	3	-	43844877	43844877	789624	4	945,172,109,141,	0,3883,5218,7299,
#Partially deleted in new
chr6	43847097	43852303	chr6:43847097-43852303	1	-	43847097	43847097	8553170	5	400,71,109,298,127,	0,1764,2998,4491,5079,
#Deleted in new
chr6	43851756	43852333	chr6:43851756-43852333	3	-	43851756	43851756	8553170	2	130,264,	0,313,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	43995722	44074652	chr6:43995722-44074652	3	-	43995722	43995722	789624	5	1586,291,125,74,156,	0,3495,4868,5320,78774,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	43997181	44003649	chr6:43997181-44003649	0	-	43997181	43997181	789624	4	127,291,74,64,	0,2036,3861,6404,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	44000579	44005150	chr6:44000579-44005150	1	+	44000995	44003126	789624	3	564,75,2470,	0,1473,2101,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	44000599	44005958	chr6:44000599-44005958	3	+	44000619	44003126	789624	4	101,127,75,3278,	0,417,1453,2081,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	44000616	44005108	chr6:44000616-44005108	1	+	44000619	44002119	789624	4	84,170,75,2428,	0,357,1436,2064,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	44000631	44003405	chr6:44000631-44003405	0	+	44000631	44000631	8553170	3	69,75,725,	0,1421,2049,
#Deleted in new
chr6	44073912	44077952	chr6:44073912-44077952	3	+	44073912	44073912	8553170	2	886,722,	0,3318,
#Deleted in new
chr6	44089241	44089696	chr6:44089241-44089696	7	-	44089241	44089241	16724991	1	455,	0,
#Partially deleted in new
chr6	44113453	44127457	chr6:44113453-44127457	3	-	44113842	44116611	0	3	756,89,114,	0,3087,13890,
#Partially deleted in new
chr6	44126913	44155519	chr6:44126913-44155519	3	+	44134584	44154883	789624	24	159,183,80,39,91,38,143,52,109,71,81,124,134,138,154,107,87,66,163,106,168,116,81,828,	0,7647,8103,8414,9435,11566,12553,12794,13338,14114,19933,20463,21338,21599,21878,22945,23310,23650,24932,25679,26762,27159,27451,27778,
#Partially deleted in new
chr6	44127553	44140328	chr6:44127553-44140328	0	+	44134584	44140328	789624	9	125,183,80,39,91,38,143,52,77,	0,7007,7463,7774,8795,10926,11913,12154,12698,
#Partially deleted in new
chr6	44127638	44155518	chr6:44127638-44155518	1	+	44134584	44154883	789624	24	40,183,80,39,91,38,143,52,109,71,81,124,134,138,154,107,87,66,163,106,168,116,81,827,	0,6922,7378,7689,8710,10841,11828,12069,12613,13389,19208,19738,20613,20874,21153,22220,22585,22925,24207,24954,26037,26434,26726,27053,
#Partially deleted in new
chr6	44127638	44149261	chr6:44127638-44149261	0	+	44127638	44127638	8553170	15	40,324,80,39,91,38,143,52,109,71,81,124,134,138,470,	0,6781,7378,7689,8710,10841,11828,12069,12613,13389,19208,19738,20613,20874,21153,
#Partially deleted in new
chr6	44127719	44140513	chr6:44127719-44140513	0	+	44127719	44127719	8553170	7	147,183,91,38,143,52,262,	0,6841,8629,10760,11747,11988,12532,
#Partially deleted in new
chr6	44135032	44155519	chr6:44135032-44155519	0	+	44135032	44154883	789624	21	64,91,38,143,52,109,71,81,124,134,138,154,107,87,66,163,106,168,116,81,828,	0,1316,3447,4434,4675,5219,5995,11814,12344,13219,13480,13759,14826,15191,15531,16813,17560,18643,19040,19332,19659,
#Partially deleted in new
chr6	44136398	44148639	chr6:44136398-44148639	0	+	44136398	44141031	789624	7	41,38,71,81,124,134,127,	0,2081,4629,10448,10978,11853,12114,
#Partially deleted in new
chr6	44138373	44148334	chr6:44138373-44148334	0	+	44138373	44138373	8553170	8	144,143,52,109,71,81,124,83,	0,1093,1334,1878,2654,8473,9003,9878,
#Deleted in new
chr6	44138812	44141082	chr6:44138812-44141082	0	+	44138812	44138812	8553170	5	119,143,52,109,55,	0,654,895,1439,2215,
#Partially deleted in new
chr6	44139711	44155519	chr6:44139711-44155519	0	+	44139711	44154369	789624	16	48,109,71,81,124,134,138,154,107,87,66,163,106,168,81,828,	0,540,1316,7135,7665,8540,8801,9080,10147,10512,10852,12134,12881,13964,14653,14980,
#Partially deleted in new
chr6	44158810	44184402	chr6:44158810-44184402	3	+	44158848	44183932	789624	23	54,72,251,70,119,134,169,84,86,75,161,179,12,212,40,66,58,65,69,79,117,59,497,	0,7947,10470,11095,13491,14129,14407,17257,17442,17770,18027,18431,20808,21141,21649,21786,21937,22122,22441,24130,24308,24894,25095,
#Partially deleted in new
chr6	44158819	44169967	chr6:44158819-44169967	0	+	44158848	44161896	789624	5	45,135,72,251,62,	0,2970,7938,10461,11086,
#Partially deleted in new
chr6	44176550	44181321	chr6:44176550-44181321	0	+	44176550	44176550	8553170	7	105,161,179,545,40,401,70,	0,287,691,3068,3909,4046,4701,
#Partially deleted in new
chr6	44176615	44183267	chr6:44176615-44183267	0	+	44176615	44176615	8553170	11	40,161,179,12,212,40,66,58,65,69,149,	0,222,626,3003,3336,3844,3981,4132,4317,4636,6503,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	44209765	44210063	chr6:44209765-44210063	3	+	44209765	44209765	8553170	1	298,	0,
#Partially deleted in new
chr6	44216938	44218236	chr6:44216938-44218236	3	+	44217471	44217726	789624	2	30,787,	0,511,
#Partially deleted in new
chr6	44216961	44218098	chr6:44216961-44218098	1	+	44217471	44217726	789624	2	33,649,	0,488,
#Partially deleted in new
chr6	44219504	44234151	chr6:44219504-44234151	3	+	44227313	44233528	789624	13	278,83,82,203,140,135,98,79,98,109,86,200,735,	0,7755,9885,10084,10402,10842,11063,11306,11859,12493,12838,13302,13912,
#Partially deleted in new
chr6	44219504	44234146	chr6:44219504-44234146	1	+	44227313	44233528	789624	13	278,80,82,203,140,135,98,79,98,109,86,200,730,	0,7758,9885,10084,10402,10842,11063,11306,11859,12493,12838,13302,13912,
#Partially deleted in new
chr6	44219629	44230665	chr6:44219629-44230665	0	+	44219696	44230665	789624	6	153,82,203,140,135,98,	0,9760,9959,10277,10717,10938,
#Partially deleted in new
chr6	44219635	44234142	chr6:44219635-44234142	1	+	44227313	44233528	789624	14	147,100,80,82,203,140,135,98,79,98,109,86,200,726,	0,1950,7627,9754,9953,10271,10711,10932,11175,11728,12362,12707,13171,13781,
#Partially deleted in new
chr6	44219635	44230409	chr6:44219635-44230409	0	+	44219635	44219635	8553170	4	147,82,203,503,	0,9754,9953,10271,
#Partially deleted in new
chr6	44223503	44234151	chr6:44223503-44234151	1	+	44227313	44233528	789624	13	138,80,82,203,140,135,98,79,98,109,86,200,735,	0,3759,5886,6085,6403,6843,7064,7307,7860,8494,8839,9303,9913,
#Partially deleted in new
chr6	44223558	44230665	chr6:44223558-44230665	0	+	44227313	44230665	789624	8	83,107,80,82,203,140,135,98,	0,2502,3704,5831,6030,6348,6788,7009,
#Partially deleted in new
chr6	44223594	44232405	chr6:44223594-44232405	0	+	44223594	44223594	8553170	10	47,80,82,203,575,98,79,98,109,63,	0,3668,5795,5994,6312,6973,7216,7769,8403,8748,
#Partially deleted in new
chr6	44223600	44229713	chr6:44223600-44229713	0	+	44227313	44229713	789624	5	41,243,80,82,125,	0,2324,3662,5789,5988,
#Partially deleted in new
chr6	44223613	44230610	chr6:44223613-44230610	0	+	44227313	44230610	789624	8	28,195,80,82,203,140,135,43,	0,2359,3649,5776,5975,6293,6733,6954,
#Partially deleted in new
chr6	44223793	44230424	chr6:44223793-44230424	0	+	44227313	44230424	789624	6	162,80,82,203,140,78,	0,3469,5596,5795,6113,6553,
#Partially deleted in new
chr6	44223799	44234141	chr6:44223799-44234141	1	+	44227313	44233528	789624	14	156,107,83,82,203,140,135,98,79,98,109,86,200,725,	0,2261,3460,5590,5789,6107,6547,6768,7011,7564,8198,8543,9007,9617,
#Partially deleted in new
chr6	44223820	44229726	chr6:44223820-44229726	0	+	44227313	44229726	789624	4	135,83,82,138,	0,3439,5569,5768,
#Partially deleted in new
chr6	44223820	44229923	chr6:44223820-44229923	0	+	44227313	44229923	789624	6	135,107,80,82,203,17,	0,2240,3442,5569,5768,6086,
#Deleted in new
chr6	44225696	44227328	chr6:44225696-44227328	0	+	44227313	44227328	8553170	2	471,66,	0,1566,
#Deleted in new
chr6	44226627	44230401	chr6:44226627-44230401	0	+	44227313	44230401	789624	6	412,83,82,203,140,55,	0,632,2762,2961,3279,3719,
#Deleted in new
chr6	44226753	44230384	chr6:44226753-44230384	0	+	44227313	44230384	789624	6	286,80,82,203,140,38,	0,509,2636,2835,3153,3593,
#Deleted in new
chr6	44226790	44230331	chr6:44226790-44230331	0	+	44226790	44226790	8553170	5	249,83,82,203,425,	0,469,2599,2798,3116,
#Deleted in new
chr6	44227003	44230075	chr6:44227003-44230075	0	+	44227003	44227003	8553170	5	36,80,82,203,169,	0,259,2386,2585,2903,
#Partially deleted in new
chr6	44227138	44234141	chr6:44227138-44234141	1	+	44227313	44233528	789624	12	204,82,203,140,135,98,79,98,109,86,200,725,	0,2251,2450,2768,3208,3429,3672,4225,4859,5204,5668,6278,
#Partially deleted in new
chr6	44229770	44232428	chr6:44229770-44232428	0	+	44229770	44230845	789624	8	21,140,115,98,79,98,109,86,	0,136,596,797,1040,1593,2227,2572,
#Deleted in new
chr6	44232055	44233591	chr6:44232055-44233591	0	+	44232055	44232055	8553170	3	51,664,175,	0,287,1361,
#Partially deleted in new
chr6	44246165	44253888	chr6:44246165-44253888	3	+	44248629	44253598	0	12	179,147,207,160,134,309,166,191,148,269,334,400,	0,2464,3211,3509,3855,4125,4882,5252,5571,5833,6879,7323,
#Partially deleted in new
chr6	44247086	44253883	chr6:44247086-44253883	1	+	44248629	44253598	0	12	109,160,207,160,134,309,166,191,148,269,334,395,	0,1530,2290,2588,2934,3204,3961,4331,4650,4912,5958,6402,
#Partially deleted in new
chr6	44247086	44253886	chr6:44247086-44253886	1	+	44248629	44253598	0	12	109,147,207,160,134,309,166,191,148,269,334,398,	0,1543,2290,2588,2934,3204,3961,4331,4650,4912,5958,6402,
#Partially deleted in new
chr6	44247865	44253883	chr6:44247865-44253883	1	+	44248629	44253598	0	12	214,147,207,160,134,309,166,191,148,269,334,395,	0,764,1511,1809,2155,2425,3182,3552,3871,4133,5179,5623,
#Deleted in new
chr6	44254095	44257554	chr6:44254095-44257554	1	-	44255564	44257410	789624	3	1549,194,155,	0,2589,3304,
#Deleted in new
chr6	44254095	44257554	chr6:44254095-44257554	0	-	44254095	44254095	8553170	3	1549,155,155,	0,2246,3304,
#Deleted in new
chr6	44254101	44257571	chr6:44254101-44257571	3	-	44254705	44255605	789624	2	1543,172,	0,3298,
#Deleted in new
chr6	44254101	44257571	chr6:44254101-44257571	1	-	44254705	44256765	789624	3	1543,194,172,	0,2583,3298,
#Deleted in new
chr6	44254101	44257890	chr6:44254101-44257890	1	-	44254705	44256742	789624	4	1543,155,194,122,	0,2240,2583,3667,
#Deleted in new
chr6	44254101	44257352	chr6:44254101-44257352	1	-	44254705	44256742	789624	4	1543,155,194,171,	0,2240,2583,3080,
#Deleted in new
chr6	44254105	44257554	chr6:44254105-44257554	1	-	44254705	44257410	789624	4	1539,155,194,155,	0,2236,2579,3294,
#Deleted in new
chr6	44254205	44254285	chr6:44254205-44254285	3	-	44254205	44254205	5263520	1	80,	0,
#Deleted in new
chr6	44258165	44265788	chr6:44258165-44265788	3	-	44259218	44265763	789624	6	1119,240,89,223,103,807,	0,1877,2285,3460,4394,6816,
#Deleted in new
chr6	44258165	44265788	chr6:44258165-44265788	1	-	44259218	44265346	789624	6	1119,240,89,223,103,807,	0,1877,2285,3460,4394,6816,
#Deleted in new
chr6	44258692	44260144	chr6:44258692-44260144	0	-	44259218	44260144	789624	3	387,72,102,	0,520,1350,
#Deleted in new
chr6	44260473	44265593	chr6:44260473-44265593	0	-	44261787	44265346	789624	3	66,223,612,	0,1152,4508,
#Partially deleted in new
chr6	44270465	44279444	chr6:44270465-44279444	3	+	44270742	44276527	789624	3	412,441,4042,	0,2600,4937,
#Partially deleted in new
chr6	44270742	44307506	chr6:44270742-44307506	1	+	44270742	44307035	789624	3	135,441,564,	0,2323,36200,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	44273193	44378957	chr6:44273193-44378957	3	+	44273193	44307035	789624	10	313,133,409,148,125,162,121,63,116,1923,	0,33749,34040,79532,87252,88637,95185,96857,103164,103841,
#Partially deleted in new
chr6	44278742	44297688	chr6:44278742-44297688	3	-	44280180	44287825	789624	5	1648,450,569,370,30,	0,3367,7221,8806,18916,
#Partially deleted in new
chr6	44280164	44286353	chr6:44280164-44286353	1	-	44280180	44286350	789624	2	226,390,	0,5799,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr6	44299653	44313326	chr6:44299653-44313326	3	-	44300546	44313323	789624	22	1058,111,84,111,123,109,110,138,141,114,173,145,134,112,39,109,146,145,168,146,192,246,	0,1502,1727,2406,2737,3148,3412,3632,4527,4766,4991,5400,5999,6626,6840,7269,7595,10645,11340,11736,12418,13427,
#Deleted in new
chr6	44300571	44301420	chr6:44300571-44301420	0	-	44300571	44300571	8553170	2	695,40,	0,809,
#Partially deleted in new
chr6	44342659	44377166	chr6:44342659-44377166	3	+	44343095	44377063	789624	9	101,139,148,125,162,121,63,116,132,	0,436,10066,17786,19171,25719,27391,33698,34375,
#Partially deleted in new
chr6	44342659	44360512	chr6:44342659-44360512	0	+	44343095	44360512	789624	4	101,139,148,67,	0,436,10066,17786,
#Partially deleted in new
chr6	44342748	44377167	chr6:44342748-44377167	1	+	44343095	44377063	789624	8	486,148,125,162,121,63,116,133,	0,9977,17697,19082,25630,27302,33609,34286,
#Partially deleted in new
chr6	44342939	44377164	chr6:44342939-44377164	0	+	44343095	44343493	789624	9	295,126,116,125,162,121,63,116,130,	0,477,9818,17506,18891,25439,27111,33418,34095,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr6	44387524	44450426	chr6:44387524-44450426	3	+	44387823	44446711	0	16	344,104,162,128,100,219,145,189,149,163,165,81,243,198,213,3820,	0,2743,5142,5921,8816,16284,18798,20919,31924,35122,36894,38578,38957,42188,58130,59082,
#Deleted in new
chr6	44435640	44435722	chr6:44435640-44435722	3	+	44435640	44435640	5263520	1	82,	0,
#Deleted in new
chr6	44525258	44526754	chr6:44525258-44526754	3	+	44525258	44525258	8553170	3	142,130,201,	0,944,1295,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	44551576	44553281	chr6:44551576-44553281	3	+	44551576	44551576	8553170	1	1705,	0,
#Partially deleted in new
chr6	44809316	45377953	chr6:44809316-45377953	0	-	44829815	45365301	789624	12	185,94,111,108,113,76,140,91,87,85,101,186,	0,20447,123336,143993,145178,152436,194336,205484,211229,296605,555884,568451,
#Partially deleted in new
chr6	44828731	45377933	chr6:44828731-45377933	3	-	44829815	45322916	789624	13	1126,111,108,113,76,140,91,87,85,96,89,101,166,	0,103921,124578,125763,133021,174921,186069,191814,277190,493064,494147,536469,549036,
#Partially deleted in new
chr6	44828844	45377933	chr6:44828844-45377933	1	-	44829815	45365301	789624	11	1013,111,108,113,76,140,91,87,85,101,166,	0,103808,124465,125650,132908,174808,185956,191701,277077,536356,548923,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	44829766	44955510	chr6:44829766-44955510	1	-	44829810	44954536	789624	5	110,111,108,113,286,	0,102886,123543,124728,125458,
#Partially deleted in new
chr6	44829815	45003700	chr6:44829815-45003700	1	-	44829815	45003700	789624	6	42,111,108,113,76,48,	0,102837,123494,124679,131937,173837,
#Deleted in new
chr6	44898710	44899295	chr6:44898710-44899295	7	+	44898710	44898710	16724991	1	585,	0,
#Deleted in new
chr6	45097495	45097976	chr6:45097495-45097976	7	+	45097495	45097495	16724991	2	124,115,	0,366,
#Deleted in new
chr6	45098020	45099260	chr6:45098020-45099260	7	+	45098020	45098020	16724991	1	1240,	0,
#Deleted in new
chr6	45158869	45159511	chr6:45158869-45159511	7	+	45158869	45158869	16724991	1	642,	0,
#Deleted in new
chr6	45197673	45197770	chr6:45197673-45197770	3	-	45197673	45197673	5263520	1	97,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	45250954	45377423	chr6:45250954-45377423	0	-	45250954	45250954	8553170	3	182,101,113,	0,114246,126356,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	45328156	45547209	chr6:45328156-45547209	0	+	45328726	45431918	789624	8	304,124,157,105,174,162,66,383,	0,504,103706,109790,163784,184089,217060,218670,
#Partially deleted in new
chr6	45328316	45551082	chr6:45328316-45551082	3	+	45328726	45547305	789624	8	144,124,365,157,105,174,162,4256,	0,344,94276,103546,109630,163624,183929,218510,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	45328322	45547305	chr6:45328322-45547305	1	+	45328726	45547305	789624	9	138,124,365,157,105,174,162,66,479,	0,338,94270,103540,109624,163618,183923,216894,218504,
#Partially deleted in new
chr6	45328322	45372055	chr6:45328322-45372055	0	+	45328322	45328322	789624	3	173,124,167,	0,338,43566,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	45328329	45551080	chr6:45328329-45551080	1	+	45328726	45547305	789624	9	131,124,365,157,105,174,162,66,4254,	0,331,94263,103533,109617,163611,183916,216887,218497,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	45328368	45551079	chr6:45328368-45551079	1	+	45328726	45547305	789624	8	416,365,157,105,174,162,66,4253,	0,94224,103494,109578,163572,183877,216848,218458,
#Partially deleted in new
chr6	45328726	45547393	chr6:45328726-45547393	1	+	45328726	45547305	789624	7	58,365,157,105,174,162,567,	0,93866,103136,109220,163214,183519,218100,
#Partially deleted in new
chr6	45328726	45664349	chr6:45328726-45664349	1	+	45328726	45663722	789624	7	58,365,157,105,174,162,1235,	0,93866,103136,109220,163214,183519,334388,
#Partially deleted in new
chr6	45361572	45372055	chr6:45361572-45372055	0	+	45361572	45361572	8553170	2	116,167,	0,10316,
#Deleted in new
chr6	45421078	45422005	chr6:45421078-45422005	3	-	45421078	45421078	8553170	1	927,	0,
#Partially deleted in new
chr6	45422035	45663872	chr6:45422035-45663872	0	+	45422576	45513475	789624	6	922,157,105,162,204,758,	0,9827,15911,90210,91414,241079,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	45422098	45550976	chr6:45422098-45550976	0	+	45422576	45513475	789624	8	859,157,105,174,162,204,66,4150,	0,9764,15848,69842,90147,91351,123118,124728,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	45422484	45551079	chr6:45422484-45551079	1	+	45422576	45547305	789624	7	473,157,105,174,162,66,4253,	0,9378,15462,69456,89761,122732,124342,
#Partially deleted in new
chr6	45422576	45547305	chr6:45422576-45547305	1	+	45422576	45547305	789624	6	381,157,105,174,162,479,	0,9286,15370,69364,89669,124250,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	45573345	45576770	chr6:45573345-45576770	3	-	45573345	45573345	8553170	2	769,744,	0,2681,
#Partially deleted in new
chr6	45880826	46015607	chr6:45880826-46015607	3	-	45881173	46015542	789624	6	362,182,107,126,110,128,	0,33401,60720,68429,74308,134653,
#Partially deleted in new
chr6	45880906	45937601	chr6:45880906-45937601	0	-	45880906	45880906	8553170	7	282,88,160,100,331,320,197,	0,11238,19455,20713,22018,33321,56498,
#Partially deleted in new
chr6	45880913	46015705	chr6:45880913-46015705	0	-	45892186	46015542	789624	9	275,76,88,35,182,107,126,110,226,	0,2839,11231,32864,33314,60633,68342,74221,134566,
#Partially deleted in new
chr6	45880913	45937518	chr6:45880913-45937518	0	-	45880913	45880913	8553170	5	275,88,331,182,114,	0,11231,22011,33314,56491,
#Partially deleted in new
chr6	45881014	46015611	chr6:45881014-46015611	1	-	45881082	46015542	789624	7	174,35,182,107,126,110,132,	0,32763,33213,60532,68241,74120,134465,
#Partially deleted in new
chr6	45898450	46080348	chr6:45898450-46080348	1	-	45903087	46080242	789624	6	4805,182,107,126,110,646,	0,15777,43096,50805,56684,181252,
#Partially deleted in new
chr6	45898825	46015825	chr6:45898825-46015825	1	-	45903087	46015542	789624	6	4430,182,107,126,110,346,	0,15402,42721,50430,56309,116654,
#Partially deleted in new
chr6	45900294	45937561	chr6:45900294-45937561	0	-	45900294	45900294	789624	5	227,100,331,320,157,	0,1325,2630,13933,37110,
#Partially deleted in new
chr6	45903065	45937546	chr6:45903065-45937546	0	-	45903065	45903065	789624	5	190,35,320,39,142,	0,10712,11162,17585,34339,
#Partially deleted in new
chr6	45911622	45937597	chr6:45911622-45937597	0	-	45911622	45911622	789624	5	1117,320,134,239,193,	0,2605,7312,8503,25782,
#Partially deleted in new
chr6	45911622	46015828	chr6:45911622-46015828	1	-	45912709	46015542	789624	6	1117,182,107,126,110,349,	0,2605,29924,37633,43512,103857,
#Partially deleted in new
chr6	45932693	45937464	chr6:45932693-45937464	0	-	45932693	45932693	8553170	3	105,108,60,	0,1530,4711,
#Deleted in new
chr6	46014282	46015546	chr6:46014282-46015546	0	-	46014282	46014282	8553170	2	432,67,	0,1197,
#Deleted in new
chr6	46018744	46018851	chr6:46018744-46018851	3	+	46018744	46018744	8553170	1	107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	46097092	46129591	chr6:46097092-46129591	3	-	46097092	46097092	8553170	3	254,120,88,	0,5447,32411,
#Partially deleted in new
chr6	46129992	46146699	chr6:46129992-46146699	3	+	46139583	46143640	0	4	197,859,171,3424,	0,9558,11059,13283,
#Partially deleted in new
chr6	46159186	46170971	chr6:46159186-46170971	3	-	46161325	46168262	0	5	2567,177,864,62,164,	0,6200,8247,10866,11621,
#Partially deleted in new
chr6	46160414	46170971	chr6:46160414-46170971	1	-	46161325	46168262	0	4	1339,177,864,164,	0,4972,7019,10393,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	46164956	46167551	chr6:46164956-46167551	0	-	46164956	46164956	8553170	2	607,118,	0,2477,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	46204728	46207386	chr6:46204728-46207386	7	+	46204728	46204728	16724991	1	2658,	0,
#Partially deleted in new
chr6	46220735	46325668	chr6:46220735-46325668	3	-	46223140	46325479	789624	4	2566,172,174,276,	0,26012,27987,104657,
#Partially deleted in new
chr6	46220737	46491972	chr6:46220737-46491972	1	-	46223140	46456976	789624	5	2564,172,174,227,103,	0,26010,27985,236014,271132,
#Partially deleted in new
chr6	46220737	46491362	chr6:46220737-46491362	1	-	46223140	46456976	789624	5	2564,172,174,227,190,	0,26010,27985,236014,270435,
#Partially deleted in new
chr6	46221467	46325672	chr6:46221467-46325672	1	-	46223056	46325479	789624	5	1673,158,172,174,280,	0,1676,25280,27255,103925,
#Deleted in new
chr6	46438309	46438619	chr6:46438309-46438619	7	+	46438309	46438309	16724991	1	310,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	46492051	46532758	chr6:46492051-46532758	3	+	46492051	46492051	789624	3	76,175,371,	0,38165,40336,
#Partially deleted in new
chr6	46549579	46652830	chr6:46549579-46652830	1	-	46550365	46637950	789624	11	858,88,89,96,134,91,108,94,150,136,425,	0,4187,37497,38454,46407,75838,81383,86809,88249,92583,102826,
#Partially deleted in new
chr6	46549803	46652786	chr6:46549803-46652786	3	-	46550365	46652582	789624	12	634,88,89,96,134,91,108,94,150,175,136,381,	0,3963,37273,38230,46183,75614,81159,86585,88025,89690,92359,102602,
#Deleted in new
chr6	46583142	46587143	chr6:46583142-46587143	0	-	46583142	46583142	8553170	2	439,67,	0,3934,
#Deleted in new
chr6	46586264	46587125	chr6:46586264-46587125	0	-	46586264	46586264	8553170	2	228,49,	0,812,
#Partially deleted in new
chr6	46588102	46637885	chr6:46588102-46637885	0	-	46588102	46588102	8553170	5	27,134,91,94,57,	0,7884,37315,48286,49726,
#Partially deleted in new
chr6	46652914	46678190	chr6:46652914-46678190	1	+	46653192	46676680	789624	7	384,192,85,123,113,85,1544,	0,2928,6047,9461,11859,15794,23732,
#Partially deleted in new
chr6	46652940	46678193	chr6:46652940-46678193	3	+	46653192	46676454	789624	9	358,192,85,123,113,85,93,103,1811,	0,2902,6021,9435,11833,15768,17194,18185,23442,
#Partially deleted in new
chr6	46658662	46668747	chr6:46658662-46668747	0	+	46658873	46668747	789624	4	384,123,113,39,	0,3713,6111,10046,
#Partially deleted in new
chr6	46658752	46670208	chr6:46658752-46670208	0	+	46658752	46658752	8553170	4	294,123,85,74,	0,3623,9956,11382,
#Partially deleted in new
chr6	46662459	46677917	chr6:46662459-46677917	0	+	46662459	46676649	789624	7	39,113,85,93,103,97,307,	0,2314,6249,7675,8666,14187,15151,
#Partially deleted in new
chr6	46662459	46671228	chr6:46662459-46671228	0	+	46662459	46671228	789624	5	39,113,85,93,103,	0,2314,6249,7675,8666,
#Partially deleted in new
chr6	46664874	46677003	chr6:46664874-46677003	0	+	46664874	46676649	789624	5	12,85,93,103,357,	0,3834,5260,6251,11772,
#Partially deleted in new
chr6	46670443	46687800	chr6:46670443-46687800	1	-	46670443	46670443	789624	2	142,201,	0,17156,
#Partially deleted in new
chr6	46670443	46688165	chr6:46670443-46688165	3	-	46670443	46670443	789624	2	142,232,	0,17490,
#Partially deleted in new
chr6	46670443	46687800	chr6:46670443-46687800	0	-	46670443	46670443	789624	2	142,126,	0,17231,
#Deleted in new
chr6	46676512	46677734	chr6:46676512-46677734	0	+	46676512	46676512	8553170	2	231,124,	0,1098,
#Partially deleted in new
chr6	46687874	46704319	chr6:46687874-46704319	3	+	46688128	46701887	789624	3	6300,125,2462,	0,7946,13983,
#Partially deleted in new
chr6	46688128	46702413	chr6:46688128-46702413	1	+	46688128	46701887	789624	4	6046,125,90,556,	0,7692,9869,13729,
#Partially deleted in new
chr6	46693971	46701958	chr6:46693971-46701958	0	+	46693971	46701901	789624	5	203,125,90,64,101,	0,1849,4026,7027,7886,
#Partially deleted in new
chr6	46704200	46735342	chr6:46704200-46735342	1	-	46704559	46722891	0	12	496,149,171,92,114,124,69,94,145,122,143,163,	0,952,3790,5126,6344,7295,8068,10259,12183,12774,18582,30979,
#Partially deleted in new
chr6	46704316	46735693	chr6:46704316-46735693	3	-	46704559	46722891	0	12	380,149,171,92,114,124,69,94,145,122,143,144,	0,836,3674,5010,6228,7179,7952,10143,12067,12658,18466,31233,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	46746916	46759506	chr6:46746916-46759506	3	+	46746921	46758921	789624	5	74,84,175,229,784,	0,2979,5020,6805,11806,
#Partially deleted in new
chr6	46753745	46758424	chr6:46753745-46758424	0	+	46753745	46756094	789624	2	205,2346,	0,2333,
#Partially deleted in new
chr6	46758295	46761158	chr6:46758295-46761158	3	-	46758295	46758295	8553170	2	545,216,	0,2647,
#Partially deleted in new
chr6	46793389	46839778	chr6:46793389-46839778	3	+	46793398	46839136	789624	14	78,25,51,41,76,118,176,222,150,216,465,174,301,799,	0,162,276,5216,5716,16030,26139,31882,32964,35966,39684,41188,41859,45590,
#Partially deleted in new
chr6	46793398	46839782	chr6:46793398-46839782	1	+	46793398	46839136	789624	13	178,51,41,76,118,176,222,150,216,465,174,301,803,	0,267,5207,5707,16021,26130,31873,32955,35957,39675,41179,41850,45581,
#Partially deleted in new
chr6	46852511	46921977	chr6:46852511-46921977	1	-	46853991	46906762	789624	21	1560,85,60,42,1395,180,209,156,213,210,171,204,222,143,59,107,177,171,55,126,265,	0,3462,4206,4355,5617,8203,10376,12530,14413,16371,19331,25690,27306,28943,29537,31047,31583,35823,47517,54149,69201,
#Partially deleted in new
chr6	46852598	46954943	chr6:46852598-46954943	3	-	46853991	46906762	789624	21	1473,85,60,42,1395,180,209,156,213,210,171,204,222,143,59,107,177,171,55,126,210,	0,3375,4119,4268,5530,8116,10289,12443,14326,16284,19244,25603,27219,28856,29450,30960,31496,35736,47430,54062,102135,
#Partially deleted in new
chr6	46859467	46863304	chr6:46859467-46863304	0	-	46859467	46859467	8553170	4	56,180,209,103,	0,1247,3420,3734,
#Deleted in new
chr6	46886598	46888416	chr6:46886598-46888416	0	-	46886598	46886598	8553170	3	447,80,82,	0,1343,1736,
#Partially deleted in new
chr6	46903470	46909078	chr6:46903470-46909078	3	+	46903470	46903470	789624	4	108,191,147,335,	0,1788,4397,5273,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr6	46997702	47042363	chr6:46997702-47042363	3	-	47000221	47029061	789624	15	2593,67,60,42,1374,189,164,152,59,101,174,150,58,112,173,	0,3798,8114,9550,11242,14304,16978,18914,23028,24255,26341,28151,30001,31290,44488,
#Deleted in new
chr6	47000032	47001972	chr6:47000032-47001972	0	-	47000032	47000032	8553170	2	263,472,	0,1468,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	47000090	47042257	chr6:47000090-47042257	0	-	47000090	47000090	8553170	13	205,67,60,42,1374,2838,3881,59,101,174,150,112,67,	0,1410,5726,7162,8854,11916,16526,20640,21867,23953,25763,28902,42100,
#Partially deleted in new
chr6	47000110	47029090	chr6:47000110-47029090	0	-	47000110	47000110	8553170	13	185,67,60,42,1374,189,164,152,59,101,174,150,98,	0,1390,5706,7142,8834,11896,14570,16506,20620,21847,23933,25743,28882,
#Partially deleted in new
chr6	47000221	47018499	chr6:47000221-47018499	1	-	47000221	47018499	789624	9	74,67,60,42,1374,189,164,152,20,	0,1279,5595,7031,8723,11785,14459,16395,18258,
#Partially deleted in new
chr6	47012110	47025992	chr6:47012110-47025992	0	-	47014834	47025992	789624	6	85,164,59,101,174,139,	0,2570,8620,9847,11933,13743,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	47012786	47042350	chr6:47012786-47042350	0	-	47012786	47012786	8553170	7	2058,152,59,101,174,150,160,	0,3830,7944,9171,11257,13067,29404,
#Partially deleted in new
chr6	47016616	47024298	chr6:47016616-47024298	0	-	47016616	47016616	8553170	4	152,59,101,255,	0,4114,5341,7427,
#Partially deleted in new
chr6	47016691	47025900	chr6:47016691-47025900	0	-	47018551	47025900	789624	6	77,103,59,101,174,47,	0,1788,4039,5266,7352,9162,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	47019885	47042294	chr6:47019885-47042294	1	-	47020451	47029061	789624	8	612,59,101,174,150,58,112,104,	0,845,2072,4158,5968,7818,9107,22305,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	47020052	47042270	chr6:47020052-47042270	0	-	47020052	47020052	8553170	5	737,101,174,150,80,	0,1905,3991,5801,22138,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	47020053	47042270	chr6:47020053-47042270	0	-	47020053	47020053	8553170	7	444,59,101,174,150,112,80,	0,677,1904,3990,5800,8939,22137,
#Partially deleted in new
chr6	47020779	47042284	chr6:47020779-47042284	0	-	47020779	47020779	8553170	6	10,101,174,150,58,94,	0,1178,3264,5074,6924,21411,
#Partially deleted in new
chr6	47231531	47309905	chr6:47231531-47309905	3	-	47232764	47309511	0	6	1463,229,266,495,652,490,	0,3138,21724,52406,54412,77884,
#Deleted in new
chr6	47368942	47369230	chr6:47368942-47369230	7	+	47368942	47368942	16724991	1	288,	0,
#Deleted in new
chr6	47477242	47477572	chr6:47477242-47477572	3	-	47477242	47477242	8553170	1	330,	0,
#Partially deleted in new
chr6	47477788	47627263	chr6:47477788-47627263	3	+	47478244	47624227	0	18	460,161,154,101,121,188,79,95,105,37,63,166,143,113,102,182,64,3078,	0,25491,55813,66817,76857,96275,98735,99220,101596,103075,104214,118072,121512,128376,130138,131334,134684,146397,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	47489066	47489170	chr6:47489066-47489170	3	+	47489066	47489066	8553170	1	104,	0,
#Partially deleted in new
chr6	47533684	47545145	chr6:47533684-47545145	0	+	47533684	47533684	8553170	2	71,540,	0,10921,
#Deleted in new
chr6	47562621	47563018	chr6:47562621-47563018	7	+	47562621	47562621	16724991	1	397,	0,
#Partially deleted in new
chr6	47576512	47579906	chr6:47576512-47579906	0	+	47576512	47576512	8553170	3	90,95,522,	0,496,2872,
#Deleted in new
chr6	47579393	47582273	chr6:47579393-47582273	0	+	47579393	47579393	8553170	3	96,37,271,	0,1470,2609,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	47607871	47609513	chr6:47607871-47609513	0	+	47607871	47607871	8553170	2	157,391,	0,1251,
#Partially deleted in new
chr6	47656435	47683528	chr6:47656435-47683528	1	+	47673419	47682686	789624	6	249,101,43,152,234,2264,	0,16955,21407,22547,23635,24829,
#Partially deleted in new
chr6	47656486	47682686	chr6:47656486-47682686	1	+	47656486	47682686	789624	6	108,168,43,152,234,1422,	0,2507,21356,22496,23584,24778,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	47656589	47697797	chr6:47656589-47697797	0	+	47673419	47690565	789624	11	70,177,101,43,152,234,1362,42,60,77,2808,	0,6811,16801,21253,22393,23481,24675,30402,33952,37082,38400,
#Partially deleted in new
chr6	47673370	47697793	chr6:47673370-47697793	3	+	47673419	47690565	789624	9	121,43,152,234,1362,42,60,77,2804,	0,4472,5612,6700,7894,13621,17171,20301,21619,
#Partially deleted in new
chr6	47685863	47722021	chr6:47685863-47722021	1	+	47685863	47718442	789624	11	152,77,35,55,152,252,1380,42,60,57,813,	0,7808,21440,22360,24871,26493,27934,30942,31428,32525,35345,
#Partially deleted in new
chr6	47698552	47722021	chr6:47698552-47722021	1	+	47707245	47718442	789624	10	242,109,55,152,252,1380,42,60,57,813,	0,8677,9671,12182,13804,15245,18253,18739,19836,22656,
#Partially deleted in new
chr6	47698552	47722021	chr6:47698552-47722021	3	+	47707245	47718442	789624	10	154,109,55,152,252,1380,42,60,57,813,	0,8677,9671,12182,13804,15245,18253,18739,19836,22656,
#Deleted in new
chr6	47715282	47715601	chr6:47715282-47715601	3	+	47715282	47715282	8553170	1	319,	0,
#Partially deleted in new
chr6	47729826	47740741	chr6:47729826-47740741	3	-	47729826	47729826	8553170	2	119,78,	0,10837,
#Deleted in new
chr6	47752827	47753240	chr6:47752827-47753240	7	-	47752827	47752827	16724991	1	413,	0,
#Partially deleted in new
chr6	47781981	47832780	chr6:47781981-47832780	1	+	47782066	47832083	789624	7	215,120,171,335,242,58,790,	0,4533,9820,13247,26172,29692,50009,
#Partially deleted in new
chr6	47782038	47824699	chr6:47782038-47824699	3	+	47782066	47823991	789624	7	158,120,171,335,242,58,717,	0,4476,9763,13190,26115,29635,41944,
#Partially deleted in new
chr6	47782038	47811882	chr6:47782038-47811882	1	+	47782066	47811882	789624	7	158,120,171,335,242,58,6,	0,4476,9763,13190,26115,29635,29838,
#Partially deleted in new
chr6	47782066	47811817	chr6:47782066-47811817	1	+	47782066	47811737	789624	6	130,120,171,335,242,144,	0,4448,9735,13162,26087,29607,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	47787067	47826381	chr6:47787067-47826381	0	+	47787067	47787067	789624	7	215,171,80,335,242,58,2399,	0,4734,6624,8161,21086,24606,36915,
#Deleted in new
chr6	47794748	47795562	chr6:47794748-47795562	0	+	47794748	47794748	8553170	3	367,83,92,	0,480,722,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	47823389	47823550	chr6:47823389-47823550	3	+	47823389	47823389	8553170	1	161,	0,
#Partially deleted in new
chr6	47878027	48068689	chr6:47878027-48068689	3	-	47878302	48068655	789624	3	1909,481,460,	0,130606,190202,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	47899608	48068653	chr6:47899608-48068653	0	-	47901906	48068653	789624	3	2327,481,424,	0,109025,168621,
#Deleted in new
chr6	48149202	48150005	chr6:48149202-48150005	7	-	48149202	48149202	16724991	1	803,	0,
#Deleted in new
chr6	48213603	48214794	chr6:48213603-48214794	7	-	48213603	48213603	16724991	1	1191,	0,
#Deleted in new
chr6	48701490	48701872	chr6:48701490-48701872	7	-	48701490	48701490	16724991	1	382,	0,
#Deleted in new
chr6	48952069	48952781	chr6:48952069-48952781	7	-	48952069	48952069	16724991	1	712,	0,
#Deleted in new
chr6	49077711	49078051	chr6:49077711-49078051	7	-	49077711	49077711	16724991	1	340,	0,
#Deleted in new
chr6	49115536	49116115	chr6:49115536-49116115	7	+	49115536	49115536	16724991	1	579,	0,
#Deleted in new
chr6	49273599	49273794	chr6:49273599-49273794	7	+	49273599	49273599	16724991	1	195,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	49344799	49344861	chr6:49344799-49344861	3	-	49344799	49344799	8553170	1	62,	0,
#Partially deleted in new
chr6	49358184	49360420	chr6:49358184-49360420	7	-	49358184	49358184	16724991	2	771,560,	0,1676,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	49430359	49463191	chr6:49430359-49463191	3	-	49431727	49459466	0	13	1497,168,148,132,116,116,112,249,172,158,368,424,89,	0,5096,9846,11480,14279,17310,18456,21106,23225,25720,27331,28722,32743,
#Partially deleted in new
chr6	49463377	49493107	chr6:49463377-49493107	3	+	49470176	49492275	789624	9	76,120,55,121,69,130,120,78,964,	0,6781,7596,8685,9412,17573,24974,25229,28766,
#Partially deleted in new
chr6	49499957	49527047	chr6:49499957-49527047	3	+	49511990	49526914	789624	6	85,106,108,127,127,560,	0,12005,15695,17472,21687,26530,
#Partially deleted in new
chr6	49499978	49526515	chr6:49499978-49526515	0	+	49511990	49526515	789624	6	64,117,108,127,127,28,	0,11973,15674,17451,21666,26509,
#Deleted in new
chr6	49550645	49552095	chr6:49550645-49552095	3	+	49550792	49551527	789624	1	1450,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	49550665	49560934	chr6:49550665-49560934	0	+	49550792	49551527	789624	3	1010,281,401,	0,4211,9868,
#Deleted in new
chr6	49551025	49552057	chr6:49551025-49552057	0	+	49551025	49551025	8553170	2	265,177,	0,855,
#Deleted in new
chr6	49551309	49552099	chr6:49551309-49552099	0	+	49551309	49551527	789624	2	366,219,	0,571,
#Partially deleted in new
chr6	49552352	49555308	chr6:49552352-49555308	0	+	49552352	49552352	8553170	2	218,432,	0,2524,
#Partially deleted in new
chr6	49565923	49580166	chr6:49565923-49580166	7	-	49565923	49565923	16724991	7	215,137,182,142,195,152,150,	0,4617,7837,8392,9094,11560,14093,
#Partially deleted in new
chr6	49605157	49636884	chr6:49605157-49636884	3	-	49605812	49636812	789624	10	673,74,71,122,138,167,148,151,184,229,	0,1690,1992,5866,7239,9529,10466,12910,14021,31498,
#Partially deleted in new
chr6	49605174	49636839	chr6:49605174-49636839	1	-	49606757	49636812	789624	10	656,193,71,122,138,167,148,151,184,184,	0,1554,1975,5849,7222,9512,10449,12893,14004,31481,
#Partially deleted in new
chr6	49605722	49636839	chr6:49605722-49636839	1	-	49606881	49636812	789624	9	108,74,71,138,167,148,151,184,184,	0,1125,1427,6674,8964,9901,12345,13456,30933,
#Partially deleted in new
chr6	49605732	49636839	chr6:49605732-49636839	1	-	49605755	49636812	789624	11	30,14,74,71,122,138,167,148,151,184,184,	0,84,1115,1417,5291,6664,8954,9891,12335,13446,30923,
#Partially deleted in new
chr6	49605732	49636839	chr6:49605732-49636839	1	-	49605762	49636812	789624	9	38,71,122,138,167,148,151,184,184,	0,1417,5291,6664,8954,9891,12335,13446,30923,
#Partially deleted in new
chr6	49605812	49636839	chr6:49605812-49636839	1	-	49605822	49636812	789624	9	18,71,122,138,167,148,151,184,184,	0,1337,5211,6584,8874,9811,12255,13366,30843,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	49612408	49615267	chr6:49612408-49615267	0	-	49612408	49612408	8553170	3	126,167,330,	0,2278,2529,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	49615115	49636839	chr6:49615115-49636839	0	-	49615115	49615115	8553170	6	189,148,151,184,248,184,	0,508,2952,4063,16796,21540,
#Partially deleted in new
chr6	49692357	49713590	chr6:49692357-49713590	3	-	49692772	49709196	0	9	543,89,98,146,88,117,75,104,116,	0,3478,5502,6004,7446,8310,16773,20143,21117,
#Partially deleted in new
chr6	49692357	49713590	chr6:49692357-49713590	1	-	49692772	49709196	0	11	543,89,105,98,146,88,117,75,37,104,90,	0,3478,5318,5502,6004,7446,8310,16773,18927,20143,21143,
#Partially deleted in new
chr6	49692359	49713561	chr6:49692359-49713561	1	-	49692772	49709196	0	10	541,89,98,146,88,117,75,37,104,87,	0,3476,5500,6002,7444,8308,16771,18925,20141,21115,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	49721930	49724007	chr6:49721930-49724007	3	+	49721930	49721930	8553170	1	2077,	0,
#Partially deleted in new
chr6	49727383	49744414	chr6:49727383-49744414	3	-	49728729	49744367	789624	8	1474,89,98,146,88,117,74,84,	0,3779,5811,6319,8120,9007,9941,16947,
#Partially deleted in new
chr6	49727401	49744437	chr6:49727401-49744437	1	-	49728729	49744367	789624	8	1456,89,98,146,88,117,104,107,	0,3761,5793,6301,8102,8989,9923,16929,
#Partially deleted in new
chr6	49728707	49744386	chr6:49728707-49744386	1	-	49728729	49744367	789624	8	150,89,98,146,88,117,128,56,	0,2455,4487,4995,6796,7683,8617,15623,
#Partially deleted in new
chr6	49733209	49744437	chr6:49733209-49744437	0	-	49733209	49744367	789624	6	83,146,88,117,104,107,	0,493,2294,3181,4115,11121,
#Deleted in new
chr6	49785650	49787307	chr6:49785650-49787307	3	-	49785933	49787187	789624	1	1657,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	49817429	49820442	chr6:49817429-49820442	3	+	49817429	49817429	8553170	3	62,200,115,	0,1693,2898,
#Partially deleted in new
chr6	49823711	49824782	chr6:49823711-49824782	3	-	49823711	49823711	8553170	3	119,108,173,	0,224,898,
#Partially deleted in new
chr6	49834256	49866528	chr6:49834256-49866528	1	-	49835315	49857400	789624	8	1187,89,98,149,91,129,68,100,	0,4180,6641,12263,13952,17744,23078,32172,
#Partially deleted in new
chr6	49834256	49866499	chr6:49834256-49866499	1	-	49835439	49857400	789624	7	1187,98,149,91,129,68,71,	0,6641,12263,13952,17744,23078,32172,
#Partially deleted in new
chr6	49834270	49857403	chr6:49834270-49857403	1	-	49835439	49857400	789624	6	1173,98,149,91,129,69,	0,6627,12249,13938,17730,23064,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	49834859	49877096	chr6:49834859-49877096	3	-	49835315	49857400	789624	8	584,89,98,149,91,129,68,88,	0,3577,6038,11660,13349,17141,22475,42149,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	49946020	49950265	chr6:49946020-49950265	0	-	49946020	49946020	8553170	3	205,169,175,	0,3196,4070,
#Deleted in new
chr6	49946100	49949444	chr6:49946100-49949444	3	-	49946100	49949444	789624	2	126,60,	0,3284,
#Deleted in new
chr6	49946100	49949444	chr6:49946100-49949444	0	-	49946100	49946100	8553170	2	125,59,	0,3285,
#Deleted in new
chr6	49960248	49964105	chr6:49960248-49964105	3	-	49960291	49964105	789624	2	198,55,	0,3802,
#Deleted in new
chr6	49968676	49969625	chr6:49968676-49969625	3	-	49968676	49969625	789624	2	191,58,	0,891,
#Partially deleted in new
chr6	50009137	50021935	chr6:50009137-50021935	1	-	50009137	50021935	789624	2	134,55,	0,12743,
#Partially deleted in new
chr6	50018842	50021981	chr6:50018842-50021981	3	-	50018976	50021935	789624	2	283,101,	0,3038,
#Partially deleted in new
chr6	50043574	50048651	chr6:50043574-50048651	3	-	50043574	50048651	789624	2	227,115,	0,4962,
#Deleted in new
chr6	50093609	50099281	chr6:50093609-50099281	1	+	50093609	50093609	8553170	3	222,200,570,	0,2100,5102,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	50093615	50181007	chr6:50093615-50181007	3	+	50093615	50093615	8553170	7	216,167,82,98,90,81,146,	0,5096,10303,23543,46926,60567,87246,
#Deleted in new
chr6	50093710	50099282	chr6:50093710-50099282	0	+	50093710	50093710	8553170	2	121,571,	0,5001,
#Partially deleted in new
chr6	50514034	50521104	chr6:50514034-50521104	3	+	50514034	50514034	8553170	2	163,122,	0,6948,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	50587606	50636865	chr6:50587606-50636865	3	-	50587606	50587606	8553170	5	79,57,128,78,104,	0,7665,8996,11236,49155,
#Partially deleted in new
chr6	50598590	50637205	chr6:50598590-50637205	1	-	50598590	50598590	8553170	4	330,53,104,75,	0,874,38171,38540,
#Partially deleted in new
chr6	50713827	50772988	chr6:50713827-50772988	3	+	50714055	50772864	789624	8	267,498,61,166,119,142,114,344,	0,1288,5262,15028,15366,31279,37383,58817,
#Partially deleted in new
chr6	50718041	50751274	chr6:50718041-50751274	0	+	50718041	50718041	8553170	6	145,61,166,119,142,64,	0,1048,10814,11152,27065,33169,
#Deleted in new
chr6	50818722	50828679	chr6:50818722-50828679	0	+	50818924	50828679	789624	4	250,27,459,61,	0,3411,4684,9896,
#Deleted in new
chr6	50818722	50847613	chr6:50818722-50847613	3	+	50818891	50843392	789624	7	250,459,61,220,119,142,4522,	0,4684,9896,17338,19252,21433,24369,
#Deleted in new
chr6	50821784	50823865	chr6:50821784-50823865	0	+	50821784	50821784	8553170	2	376,459,	0,1622,
#Deleted in new
chr6	50857254	50857662	chr6:50857254-50857662	7	-	50857254	50857254	16724991	1	408,	0,
#Deleted in new
chr6	50897614	50898225	chr6:50897614-50898225	7	-	50897614	50897614	16724991	1	611,	0,
#Deleted in new
chr6	50912711	50913256	chr6:50912711-50913256	7	-	50912711	50912711	16724991	1	545,	0,
#Deleted in new
chr6	51385281	51385849	chr6:51385281-51385849	7	-	51385281	51385281	16724991	1	568,	0,
#Deleted in new
chr6	51410080	51410537	chr6:51410080-51410537	7	-	51410080	51410080	16724991	1	457,	0,
#Deleted in new
chr6	51464689	51464765	chr6:51464689-51464765	3	+	51464689	51464689	8553170	1	76,	0,
#Deleted in new
chr6	51537154	51537543	chr6:51537154-51537543	7	-	51537154	51537154	16724991	1	389,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	51599722	51622541	chr6:51599722-51622541	0	+	51599722	51599722	8553170	3	729,81,182,	0,5541,22637,
#Partially deleted in new
chr6	51605264	51622884	chr6:51605264-51622884	3	+	51605264	51605264	8553170	2	80,530,	0,17090,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	51610211	51623428	chr6:51610211-51623428	1	+	51610211	51610211	8553170	2	221,1074,	0,12143,
#Partially deleted in new
chr6	51615299	52087625	chr6:51615299-52087625	3	-	51619080	52084933	789624	67	4221,120,159,108,88,136,1018,158,169,879,153,155,88,114,138,129,66,196,178,247,136,135,106,113,131,57,126,192,158,211,213,157,151,220,144,1608,68,196,136,131,276,106,123,185,128,139,176,128,143,91,90,279,115,142,96,102,71,40,65,75,79,58,109,151,78,136,192,	0,11697,17265,23549,32731,33785,43652,129085,131421,132487,137901,139484,157402,160508,175936,215561,221104,232475,240593,252563,255204,267793,270567,271833,288297,288686,290915,293983,296499,297066,318810,344570,395009,402110,407501,409274,412529,412856,417730,420291,427559,428325,429666,430704,433192,434857,437776,438738,440287,441398,441590,443023,444628,447219,449655,450676,454157,455106,455706,456815,458163,460976,464600,467092,467878,469582,472134,
#Deleted in new
chr6	51621820	51622541	chr6:51621820-51622541	0	+	51621820	51621820	789624	2	106,182,	0,539,
#Boundary problem: need 61, got 0, diff 61, mapped 0.0
chr6	51720848	52087610	chr6:51720848-52087610	1	-	51721985	52084933	789624	61	1172,158,169,879,153,155,88,114,138,129,66,196,178,247,136,135,106,113,131,57,126,192,158,211,213,157,151,220,144,1608,68,196,136,131,276,106,123,185,128,139,176,128,143,91,90,279,115,142,96,102,71,40,65,75,79,58,109,151,78,136,177,	0,23536,25872,26938,32352,33935,51853,54959,70387,110012,115555,126926,135044,147014,149655,162244,165018,166284,182748,183137,185366,188434,190950,191517,213261,239021,289460,296561,301952,303725,306980,307307,312181,314742,322010,322776,324117,325155,327643,329308,332227,333189,334738,335849,336041,337474,339079,341670,344106,345127,348608,349557,350157,351266,352614,355427,359051,361543,362329,364033,366585,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	51975672	51975959	chr6:51975672-51975959	3	+	51975672	51975672	8553170	1	287,	0,
#Deleted in new
chr6	52144348	52144434	chr6:52144348-52144434	3	+	52144348	52144348	789624	1	86,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	52146813	52151119	chr6:52146813-52151119	3	-	52146813	52146813	789624	3	124,100,238,	0,554,4068,
#Deleted in new
chr6	52148922	52149041	chr6:52148922-52149041	3	+	52148922	52148922	789624	1	119,	0,
#Deleted in new
chr6	52186374	52190638	chr6:52186374-52190638	3	+	52186431	52189292	8553170	3	84,203,1584,	0,1228,2680,
#Deleted in new
chr6	52186386	52190638	chr6:52186386-52190638	1	+	52186431	52189292	0	3	72,203,1584,	0,1216,2668,
#Partially deleted in new
chr6	52236680	52244537	chr6:52236680-52244537	3	-	52236930	52244429	0	3	488,221,141,	0,2049,7716,
#Partially deleted in new
chr6	52236680	52239167	chr6:52236680-52239167	0	-	52236680	52236680	8553170	2	488,438,	0,2049,
#Deleted in new
chr6	52246459	52247362	chr6:52246459-52247362	7	+	52246459	52246459	16724991	1	903,	0,
#Partially deleted in new
chr6	52264008	52284751	chr6:52264008-52284751	1	-	52264587	52284674	789624	17	778,70,86,104,141,151,127,175,209,132,154,109,239,131,209,113,155,	0,2066,2602,3856,5077,8292,9221,9733,12259,13058,13526,14733,15352,18036,18644,19285,20588,
#Partially deleted in new
chr6	52264008	52284837	chr6:52264008-52284837	1	-	52264587	52284809	789624	17	778,70,86,104,141,151,127,175,209,132,154,109,239,131,209,113,241,	0,2066,2602,3856,5077,8292,9221,9733,12259,13058,13526,14733,15352,18036,18644,19285,20588,
#Partially deleted in new
chr6	52264013	52284881	chr6:52264013-52284881	3	-	52264587	52284809	789624	17	773,70,86,104,141,151,127,175,209,132,154,109,239,131,209,113,285,	0,2061,2597,3851,5072,8287,9216,9728,12254,13053,13521,14728,15347,18031,18639,19280,20583,
#Partially deleted in new
chr6	52264585	52284881	chr6:52264585-52284881	1	-	52264587	52284817	789624	16	201,70,86,104,141,151,127,175,209,132,154,109,239,131,209,285,	0,1489,2025,3279,4500,7715,8644,9156,11682,12481,12949,14156,14775,17459,18067,20011,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	52264620	52273775	chr6:52264620-52273775	0	-	52264663	52273775	789624	9	166,151,70,86,104,141,151,127,34,	0,614,1454,1990,3244,4465,7680,8609,9121,
#Partially deleted in new
chr6	52275981	52279452	chr6:52275981-52279452	0	-	52275981	52275981	8553170	5	495,132,154,109,92,	0,1085,1553,2760,3379,
#Deleted in new
chr6	52282110	52284881	chr6:52282110-52284881	0	-	52282840	52284809	789624	3	65,209,285,	0,542,2486,
#Partially deleted in new
chr6	52361420	52403549	chr6:52361420-52403549	0	+	52403213	52403549	789624	2	194,388,	0,41741,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	52362122	52484372	chr6:52362122-52484372	1	+	52438342	52482892	789624	10	127,222,288,150,193,221,141,214,148,1589,	0,61823,76181,90565,91972,102772,107210,116914,117517,120661,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	52362122	52482587	chr6:52362122-52482587	0	+	52362122	52362122	8553170	10	127,222,288,150,193,221,141,214,148,1042,	0,61823,76181,90565,91972,102772,107210,116914,117517,119423,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	52362127	52407777	chr6:52362127-52407777	3	+	52403213	52404278	789624	2	122,4616,	0,41034,
#Partially deleted in new
chr6	52362137	52492399	chr6:52362137-52492399	1	+	52438342	52492341	789624	11	112,222,288,150,193,221,141,214,148,211,130,	0,61808,76166,90550,91957,102757,107195,116899,117502,128002,130132,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	52362445	52407691	chr6:52362445-52407691	1	+	52403213	52404278	789624	3	46,79,4530,	0,11102,40716,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	52413013	52438481	chr6:52413013-52438481	0	+	52413120	52438481	789624	3	152,222,178,	0,10932,25290,
#Partially deleted in new
chr6	52419742	52492497	chr6:52419742-52492497	0	+	52419742	52419742	8553170	10	731,222,288,1600,221,141,214,148,211,228,	0,4203,18561,32945,45152,49590,59294,59897,70397,72527,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	52420106	52492407	chr6:52420106-52492407	1	+	52423808	52492341	789624	12	367,128,222,288,150,193,221,141,214,148,211,138,	0,3580,3839,18197,32581,33988,44788,49226,58930,59533,70033,72163,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	52420195	52497190	chr6:52420195-52497190	3	+	52420410	52492341	789624	11	278,222,288,150,193,221,141,214,148,211,4921,	0,3750,18108,32492,33899,44699,49137,58841,59444,69944,72074,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	52420206	52482336	chr6:52420206-52482336	0	+	52420206	52420206	8553170	10	267,222,288,150,193,221,141,214,148,791,	0,3739,18097,32481,33888,44688,49126,58830,59433,61339,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	52420277	52492409	chr6:52420277-52492409	0	+	52420277	52420277	8553170	11	196,128,222,288,1600,221,141,214,148,211,140,	0,3409,3668,18026,32410,44617,49055,58759,59362,69862,71992,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	52420288	52495768	chr6:52420288-52495768	1	+	52420410	52495653	789624	11	185,222,288,150,193,221,141,214,148,211,160,	0,3657,18015,32399,33806,44606,49044,58748,59351,69851,75320,
#Partially deleted in new
chr6	52420290	52524741	chr6:52420290-52524741	1	+	52420410	52522958	789624	11	183,222,288,150,193,221,141,214,148,211,1858,	0,3655,18013,32397,33804,44604,49042,58746,59349,69849,102593,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	52420313	52480139	chr6:52420313-52480139	1	+	52420410	52479806	789624	9	160,222,288,150,193,221,141,214,500,	0,3632,17990,32374,33781,44581,49019,58723,59326,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	52420318	52482319	chr6:52420318-52482319	0	+	52420410	52454070	789624	10	155,222,288,150,226,221,141,214,148,774,	0,3627,17985,32369,33743,44576,49014,58718,59321,61227,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	52420341	52484604	chr6:52420341-52484604	1	+	52420410	52482892	789624	10	132,222,288,150,193,221,141,214,148,1821,	0,3604,17962,32346,33753,44553,48991,58695,59298,62442,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	52420344	52492407	chr6:52420344-52492407	1	+	52423795	52492341	789624	12	129,142,222,288,150,193,221,141,214,148,211,138,	0,3342,3601,17959,32343,33750,44550,48988,58692,59295,69795,71925,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	52420354	52438352	chr6:52420354-52438352	0	+	52420410	52437615	789624	4	119,222,117,49,	0,3591,17207,17949,
#Partially deleted in new
chr6	52420363	52491000	chr6:52420363-52491000	1	+	52420410	52490398	789624	10	110,222,288,150,193,221,141,214,148,861,	0,3582,17940,32324,33731,44531,48969,58673,59276,69776,
#Partially deleted in new
chr6	52420366	52523094	chr6:52420366-52523094	0	+	52420410	52438317	789624	11	107,136,288,150,193,221,141,214,148,211,211,	0,3579,17937,32321,33728,44528,48966,58670,59273,69773,102517,
#Partially deleted in new
chr6	52420372	52492421	chr6:52420372-52492421	0	+	52420372	52420372	8553170	11	101,215,151,150,193,221,141,214,148,211,152,	0,3580,17931,32315,33722,44522,48960,58664,59267,69767,71897,
#Partially deleted in new
chr6	52420378	52492503	chr6:52420378-52492503	1	+	52420410	52492341	789624	10	95,222,150,193,221,141,214,148,211,234,	0,3567,32309,33716,44516,48954,58658,59261,69761,71891,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	52421006	52492420	chr6:52421006-52492420	1	+	52423808	52492341	789624	12	62,128,222,288,150,193,221,141,214,148,211,151,	0,2680,2939,17297,31681,33088,43888,48326,58030,58633,69133,71263,
#Partially deleted in new
chr6	52421007	52438572	chr6:52421007-52438572	0	+	52438342	52438572	789624	3	61,222,269,	0,2938,17296,
#Partially deleted in new
chr6	52421035	52452770	chr6:52421035-52452770	0	+	52452732	52452770	789624	5	33,215,72,137,83,	0,2917,17268,17419,31652,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	52423808	52495783	chr6:52423808-52495783	1	+	52423808	52492341	789624	11	6,222,288,150,193,221,141,214,148,211,3514,	0,137,14495,28879,30286,41086,45524,55228,55831,66331,68461,
#Partially deleted in new
chr6	52438351	52492421	chr6:52438351-52492421	0	+	52438351	52454070	789624	9	240,150,226,221,141,214,148,211,152,	0,14336,15710,26543,30981,40685,41288,51788,53918,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	52438352	52517342	chr6:52438352-52517342	0	+	52438352	52515933	789624	9	239,150,193,221,141,214,148,211,1448,	0,14335,15742,26542,30980,40684,41287,51787,77542,
#Partially deleted in new
chr6	52438364	52453556	chr6:52438364-52453556	0	+	52438364	52438364	8553170	3	227,150,562,	0,14323,14630,
#Partially deleted in new
chr6	52453755	52492493	chr6:52453755-52492493	0	+	52453755	52453755	8553170	7	532,221,141,159,148,211,224,	0,11139,15577,25336,25884,36384,38514,
#Partially deleted in new
chr6	52454205	52479692	chr6:52454205-52479692	0	+	52454205	52469349	789624	4	82,141,214,53,	0,15127,24831,25434,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	52468393	52493402	chr6:52468393-52493402	0	+	52468393	52468393	8553170	5	1080,214,148,211,1133,	0,10643,11246,21746,23876,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	52485168	52489476	chr6:52485168-52489476	0	+	52485168	52485168	8553170	1	4308,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	52497401	52576915	chr6:52497401-52576915	3	-	52503196	52576915	789624	11	5869,164,144,105,71,85,59,117,110,64,120,	0,7189,8197,8630,10151,10832,12126,18604,19226,38381,79394,
#Partially deleted in new
chr6	52522988	52529886	chr6:52522988-52529886	0	+	52522988	52522988	8553170	3	37,333,344,	0,1785,6554,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	52577306	52583993	chr6:52577306-52583993	3	+	52577306	52577306	789624	3	1087,235,1131,	0,2068,5556,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	52577484	52579527	chr6:52577484-52579527	1	+	52577484	52577484	8553170	3	167,344,153,	0,565,1890,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	52578145	52582932	chr6:52578145-52582932	0	+	52578145	52578145	8553170	3	248,235,70,	0,1229,4717,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	52578365	52583559	chr6:52578365-52583559	1	+	52578365	52578365	8553170	4	28,93,235,697,	0,136,1009,4497,
#Deleted in new
chr6	52657372	52657651	chr6:52657372-52657651	7	+	52657372	52657372	16724991	1	279,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	52664365	52669153	chr6:52664365-52669153	7	+	52664365	52664365	16724991	3	1054,130,2405,	0,2023,2383,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	52664429	52669155	chr6:52664429-52669155	5	+	52664429	52664429	16724991	2	990,2767,	0,1959,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	52664430	52669089	chr6:52664430-52669089	4	+	52664430	52664430	16724991	3	195,503,2701,	0,486,1958,
#Deleted in new
chr6	52665273	52666878	chr6:52665273-52666878	5	+	52665273	52665273	16724991	3	146,160,130,	0,1115,1475,
#Partially deleted in new
chr6	52671108	52686588	chr6:52671108-52686588	3	+	52677102	52686049	0	5	137,86,102,88,579,	0,5978,10704,12969,14901,
#Partially deleted in new
chr6	52687929	52703825	chr6:52687929-52703825	7	-	52687929	52687929	16724991	5	135,149,143,103,107,	0,2873,4992,9085,15789,
#Deleted in new
chr6	52688660	52688998	chr6:52688660-52688998	7	+	52688660	52688660	16724991	1	338,	0,
#Partially deleted in new
chr6	52739589	52744656	chr6:52739589-52744656	7	-	52739589	52739589	16724991	4	122,142,132,52,	0,1993,4004,5015,
#Partially deleted in new
chr6	52750088	52763569	chr6:52750088-52763569	3	-	52750576	52757947	0	7	611,132,142,133,52,117,126,	0,1488,2765,4854,6169,7772,13355,
#Partially deleted in new
chr6	52765279	52778347	chr6:52765279-52778347	7	-	52765279	52765279	16724991	4	103,132,142,131,	0,1006,3840,12937,
#Partially deleted in new
chr6	52791663	52803910	chr6:52791663-52803910	3	-	52791857	52799267	0	7	317,132,142,133,52,117,126,	0,1192,2461,4518,5922,7517,12121,
#Partially deleted in new
chr6	52791663	52799297	chr6:52791663-52799297	0	-	52791663	52791663	8553170	5	317,132,142,52,117,	0,1192,2461,5922,7517,
#Partially deleted in new
chr6	52794132	52803860	chr6:52794132-52803860	0	-	52794132	52794132	8553170	4	134,133,117,76,	0,2049,5048,9652,
#Partially deleted in new
chr6	52805612	52813460	chr6:52805612-52813460	7	-	52805612	52805612	16724991	5	125,132,140,133,52,	0,1009,3864,6674,7796,
#Partially deleted in new
chr6	52831654	52840843	chr6:52831654-52840843	1	-	52831847	52840813	789624	6	316,132,142,133,52,117,	0,1204,2486,4581,5903,9072,
#Partially deleted in new
chr6	52831654	52840843	chr6:52831654-52840843	0	-	52831654	52831654	8553170	5	316,132,142,52,117,	0,1204,2486,5903,9072,
#Partially deleted in new
chr6	52831741	52846095	chr6:52831741-52846095	3	-	52831847	52840813	789624	7	229,132,142,133,52,117,40,	0,1117,2399,4494,5816,8985,14314,
#Partially deleted in new
chr6	52847909	52870329	chr6:52847909-52870329	7	-	52847909	52847909	16724991	6	123,132,142,134,52,86,	0,1009,2319,10371,12008,22334,
#Partially deleted in new
chr6	52873013	52879940	chr6:52873013-52879940	7	-	52873013	52873013	16724991	5	123,132,102,168,51,	0,1055,3898,5718,6876,
#Partially deleted in new
chr6	52896638	52909685	chr6:52896638-52909685	3	-	52896805	52905834	0	7	290,132,142,133,52,108,45,	0,1186,3295,5707,7037,9109,13002,
#Partially deleted in new
chr6	52896638	52909666	chr6:52896638-52909666	1	-	52896805	52902467	789624	6	290,132,142,133,52,26,	0,1186,3295,5707,7037,13002,
#Partially deleted in new
chr6	52897841	52905822	chr6:52897841-52905822	0	-	52897841	52902467	789624	4	68,135,133,75,	0,2099,4504,7906,
#Partially deleted in new
chr6	52939905	52957521	chr6:52939905-52957521	7	-	52939905	52939905	16724991	6	111,132,142,133,50,43,	0,5428,12527,15633,16523,17573,
#Partially deleted in new
chr6	52977947	52988002	chr6:52977947-52988002	0	-	52977947	52977947	8553170	5	645,132,142,133,646,	0,4626,6516,7503,9409,
#Partially deleted in new
chr6	52977952	52995378	chr6:52977952-52995378	2	-	52978469	52994243	0	7	640,132,142,133,52,105,130,	0,4621,6511,7498,9404,16204,17296,
#Partially deleted in new
chr6	52977952	52995304	chr6:52977952-52995304	0	-	52977952	52977952	8553170	6	640,132,142,52,105,56,	0,4621,6511,9404,16204,17296,
#Partially deleted in new
chr6	52978254	52994403	chr6:52978254-52994403	1	-	52978469	52984598	0	4	338,132,142,247,	0,4319,6209,15902,
#Partially deleted in new
chr6	52978463	52995170	chr6:52978463-52995170	1	-	52978469	52994243	0	7	129,132,142,133,52,105,100,	0,4110,6000,6987,8893,15693,16607,
#Partially deleted in new
chr6	52982573	52994261	chr6:52982573-52994261	0	-	52982573	52984598	789624	3	132,142,105,	0,1890,11583,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	53001278	53061770	chr6:53001278-53061770	1	-	53005148	53041236	789624	14	4025,123,129,149,191,321,168,172,133,80,122,55,273,175,	0,5036,8160,10490,10758,12383,14804,17051,17948,29786,31254,36660,39857,60317,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr6	53001310	53061802	chr6:53001310-53061802	3	-	53005148	53041236	789624	15	3993,123,129,149,191,321,168,172,133,80,122,55,273,111,207,	0,5004,8128,10458,10726,12351,14772,17019,17916,29754,31222,36628,39825,59625,60285,
#Partially deleted in new
chr6	53054556	53081098	chr6:53054556-53081098	0	+	53073492	53081098	789624	7	131,62,87,159,58,100,131,	0,3206,16500,18924,21929,24242,26411,
#Partially deleted in new
chr6	53064997	53097888	chr6:53064997-53097888	1	+	53073492	53097830	789624	13	211,87,159,58,100,131,115,119,91,96,94,152,167,	0,6059,8483,11488,13801,15970,17506,27431,27736,28468,28887,30515,32724,
#Deleted in new
chr6	53065447	53067994	chr6:53065447-53067994	0	+	53065447	53065447	8553170	2	345,90,	0,2457,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	53065458	53099603	chr6:53065458-53099603	3	+	53065789	53097830	789624	13	334,87,159,58,100,131,115,119,91,96,94,152,1882,	0,5598,8022,11027,13340,15509,17045,26970,27275,28007,28426,30054,32263,
#Partially deleted in new
chr6	53066036	53081018	chr6:53066036-53081018	0	+	53073492	53081018	789624	6	114,87,159,58,100,51,	0,5020,7444,10449,12762,14931,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	53070851	53100873	chr6:53070851-53100873	1	+	53071023	53097830	789624	12	292,159,58,100,131,115,119,91,96,94,152,3152,	0,2629,5634,7947,10116,11652,21577,21882,22614,23033,24661,26870,
#Partially deleted in new
chr6	53070971	53073764	chr6:53070971-53073764	0	+	53070971	53070971	8553170	2	172,284,	0,2509,
#Partially deleted in new
chr6	53073609	53093316	chr6:53073609-53093316	0	+	53073609	53073609	8553170	7	30,58,100,131,115,119,583,	0,2876,5189,7358,8894,18819,19124,
#Partially deleted in new
chr6	53078864	53092691	chr6:53078864-53092691	0	+	53078864	53078864	8553170	4	34,131,115,263,	0,2103,3639,13564,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	53090891	53097904	chr6:53090891-53097904	0	+	53090891	53090891	8553170	5	1656,828,94,152,183,	0,1842,2993,4621,6830,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	53090960	53091257	chr6:53090960-53091257	3	+	53090960	53090960	8553170	1	297,	0,
#Partially deleted in new
chr6	53092810	53098368	chr6:53092810-53098368	0	+	53092810	53098187	789624	6	14,96,94,152,70,208,	0,655,1074,2702,4911,5350,
#Partially deleted in new
chr6	53093476	53097814	chr6:53093476-53097814	0	+	53093476	53097814	789624	5	85,94,150,152,93,	0,408,1215,2036,4245,
#Deleted in new
chr6	53125643	53126146	chr6:53125643-53126146	3	-	53125643	53125643	8553170	1	503,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	53126963	53148829	chr6:53126963-53148829	3	-	53128205	53145632	789624	6	1983,129,113,253,211,76,	0,3839,5043,7108,18594,21790,
#Deleted in new
chr6	53153794	53153898	chr6:53153794-53153898	3	-	53153794	53153794	8553170	1	104,	0,
#Deleted in new
chr6	53196719	53197159	chr6:53196719-53197159	7	-	53196719	53196719	16724991	1	440,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	53206597	53208697	chr6:53206597-53208697	7	-	53206597	53206597	16724991	1	2100,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	53219260	53219424	chr6:53219260-53219424	3	+	53219260	53219260	8553170	1	164,	0,
#Deleted in new
chr6	53235620	53236297	chr6:53235620-53236297	7	-	53235620	53235620	16724991	1	677,	0,
#Partially deleted in new
chr6	53267397	53349179	chr6:53267397-53349179	1	-	53269126	53295699	789624	9	1873,135,125,172,78,81,188,66,363,	0,3195,5822,7692,8781,20464,24378,28244,81419,
#Partially deleted in new
chr6	53267397	53349179	chr6:53267397-53349179	1	-	53269112	53295699	789624	7	1873,135,172,78,188,66,363,	0,3195,7692,8781,24378,28244,81419,
#Partially deleted in new
chr6	53267398	53349007	chr6:53267398-53349007	3	-	53269126	53295699	789624	8	1872,135,125,172,78,188,66,191,	0,3194,5821,7691,8780,24377,28243,81418,
#Partially deleted in new
chr6	53275124	53348973	chr6:53275124-53348973	0	-	53275124	53275124	8553170	6	137,78,135,188,66,157,	0,1054,15276,16651,20517,73692,
#Partially deleted in new
chr6	53276178	53348950	chr6:53276178-53348950	0	-	53276178	53276178	8553170	6	78,95,135,188,66,134,	0,13916,14222,15597,19463,72638,
#Partially deleted in new
chr6	53276178	53348950	chr6:53276178-53348950	0	-	53276178	53276178	8553170	7	78,98,95,135,188,66,134,	0,1467,13916,14222,15597,19463,72638,
#Deleted in new
chr6	53276992	53277071	chr6:53276992-53277071	3	+	53276992	53276992	5263520	1	79,	0,
#Partially deleted in new
chr6	53294087	53348926	chr6:53294087-53348926	1	-	53294282	53295699	789624	3	404,66,110,	0,1554,54729,
#Deleted in new
chr6	53336942	53337346	chr6:53336942-53337346	7	-	53336942	53336942	16724991	1	404,	0,
#Deleted in new
chr6	53350157	53350705	chr6:53350157-53350705	3	+	53350157	53350157	8553170	1	548,	0,
#Deleted in new
chr6	53354714	53355065	chr6:53354714-53355065	7	+	53354714	53354714	16724991	1	351,	0,
#Deleted in new
chr6	53368669	53369009	chr6:53368669-53369009	7	+	53368669	53368669	16724991	1	340,	0,
#Deleted in new
chr6	53378502	53378861	chr6:53378502-53378861	7	+	53378502	53378502	16724991	1	359,	0,
#Deleted in new
chr6	53381518	53382203	chr6:53381518-53382203	7	+	53381518	53381518	16724991	1	685,	0,
#Deleted in new
chr6	53415293	53415607	chr6:53415293-53415607	3	-	53415293	53415293	8553170	1	314,	0,
#Partially deleted in new
chr6	53418451	53418737	chr6:53418451-53418737	7	-	53418451	53418451	16724991	1	286,	0,
#Partially deleted in new
chr6	53497340	53545129	chr6:53497340-53545129	3	-	53498755	53544645	789624	16	1627,121,104,82,105,93,113,139,117,75,134,59,114,183,113,634,	0,2704,2906,3091,8051,8462,9572,10139,11254,11835,16863,17098,18768,23437,25074,47155,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	53497340	53510448	chr6:53497340-53510448	1	-	53498755	53508711	789624	10	1627,121,104,82,105,93,113,139,117,1273,	0,2704,2906,3091,8051,8462,9572,10139,11254,11835,
#Partially deleted in new
chr6	53497340	53545101	chr6:53497340-53545101	1	-	53498755	53544645	789624	16	1627,121,104,82,105,93,113,139,117,75,134,59,114,183,113,606,	0,2704,2906,3091,8051,8462,9572,10139,11254,11835,16863,17098,18768,23437,25074,47155,
#Partially deleted in new
chr6	53497383	53548206	chr6:53497383-53548206	1	-	53498755	53522518	789624	16	1584,121,104,82,105,93,113,139,117,75,134,59,114,183,113,151,	0,2661,2863,3048,8008,8419,9529,10096,11211,11792,16820,17055,18725,23394,25031,50672,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	53498141	53501350	chr6:53498141-53501350	0	-	53498141	53498141	8553170	2	826,1306,	0,1903,
#Partially deleted in new
chr6	53498386	53544633	chr6:53498386-53544633	0	-	53498755	53544633	789624	16	581,121,104,82,105,93,113,139,117,75,134,59,132,183,113,138,	0,1658,1860,2045,7005,7416,8526,9093,10208,10789,15817,16052,17722,22391,24028,46109,
#Partially deleted in new
chr6	53498755	53544645	chr6:53498755-53544645	1	-	53498755	53544645	789624	15	212,121,104,82,105,93,113,139,117,75,134,59,183,113,150,	0,1289,1491,1676,6636,7047,8157,8724,9839,10420,15448,15683,22022,23659,45740,
#Partially deleted in new
chr6	53498771	53505664	chr6:53498771-53505664	0	-	53498771	53498771	8553170	5	196,121,104,82,273,	0,1273,1475,1660,6620,
#Partially deleted in new
chr6	53500199	53507078	chr6:53500199-53507078	0	-	53500199	53500199	8553170	5	151,82,105,93,166,	0,232,5192,5603,6713,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	53503184	53506919	chr6:53503184-53506919	3	+	53503184	53503184	8553170	3	144,281,122,	0,2969,3613,
#Deleted in new
chr6	53505260	53505898	chr6:53505260-53505898	0	-	53505260	53505260	8553170	2	236,96,	0,542,
#Partially deleted in new
chr6	53508596	53545088	chr6:53508596-53545088	0	-	53514517	53544645	789624	5	115,75,134,94,593,	0,579,5607,5842,35899,
#Partially deleted in new
chr6	53512988	53545033	chr6:53512988-53545033	1	-	53514197	53544645	789624	6	1349,59,114,183,113,538,	0,1450,3120,7789,9426,31507,
#Partially deleted in new
chr6	53514206	53522779	chr6:53514206-53522779	0	-	53514206	53514206	8553170	5	131,59,109,183,365,	0,232,1902,6571,8208,
#Partially deleted in new
chr6	53514334	53523928	chr6:53514334-53523928	0	-	53514334	53514334	8553170	7	3,59,114,183,113,69,12,	0,104,1774,6443,8080,8920,9582,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	53561288	53617007	chr6:53561288-53617007	3	-	53561288	53561288	789624	5	3132,140,183,76,122,	0,3461,8134,11911,55597,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	53561905	53617171	chr6:53561905-53617171	0	-	53561905	53561905	8553170	4	2515,140,183,286,	0,2844,7517,54980,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	53561919	53616994	chr6:53561919-53616994	0	-	53561919	53561919	8553170	4	2501,140,126,109,	0,2830,7560,54966,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	53564296	53583333	chr6:53564296-53583333	0	-	53564296	53564296	8553170	4	124,140,183,35,	0,453,5126,19002,
#Partially deleted in new
chr6	53569280	53573265	chr6:53569280-53573265	0	-	53569280	53569280	8553170	2	325,66,	0,3919,
#Partially deleted in new
chr6	53628379	53631394	chr6:53628379-53631394	3	+	53628379	53628379	789624	3	67,117,382,	0,195,2633,
#Partially deleted in new
chr6	53647900	53665708	chr6:53647900-53665708	3	-	53651597	53655272	789624	3	4430,1205,108,	0,6200,17700,
#Deleted in new
chr6	53651597	53655272	chr6:53651597-53655272	1	-	53651597	53655272	789624	2	733,1172,	0,2503,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	53740748	53747022	chr6:53740748-53747022	1	-	53740748	53740748	8553170	3	590,146,114,	0,3470,6160,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	53745731	53793709	chr6:53745731-53793709	3	-	53745731	53745731	8553170	4	872,105,67,169,	0,1177,47551,47809,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	53790874	53794274	chr6:53790874-53794274	0	-	53790874	53790874	8553170	3	314,67,102,	0,2408,3298,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	53794496	53905362	chr6:53794496-53905362	0	+	53795256	53897315	789624	11	120,680,118,79,90,57,64,71,145,119,984,	0,239,47613,84496,88390,102001,102332,102792,105250,108132,109882,
#Partially deleted in new
chr6	53794979	53924121	chr6:53794979-53924121	3	+	53795256	53922793	789624	14	436,118,79,90,57,64,75,145,119,84,116,173,137,1487,	0,47130,84013,87907,101518,101849,102305,104767,107649,109399,118874,124518,125645,127655,
#Partially deleted in new
chr6	53795089	53884145	chr6:53795089-53884145	1	+	53795256	53883969	789624	5	326,118,79,90,195,	0,47020,83903,87797,88861,
#Deleted in new
chr6	53918973	53920788	chr6:53918973-53920788	3	-	53918973	53918973	8553170	2	213,243,	0,1572,
#Deleted in new
chr6	53919239	53920748	chr6:53919239-53920748	0	+	53919239	53919239	8553170	2	431,124,	0,1385,
#Partially deleted in new
chr6	53929981	54124654	chr6:53929981-54124654	0	+	53930220	54124654	789624	3	296,93,182,	0,52776,194491,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	53930021	53995010	chr6:53930021-53995010	0	+	53930021	53930021	8553170	3	256,93,221,	0,52736,64768,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	53930045	53997667	chr6:53930045-53997667	3	+	53930045	53930045	789624	4	232,93,75,2704,	0,52712,64744,64918,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	53978548	54047389	chr6:53978548-54047389	0	-	53978548	53978548	8553170	3	169,95,98,	0,53058,68743,
#Partially deleted in new
chr6	53988906	54047388	chr6:53988906-54047388	0	-	53988906	53988906	8553170	3	246,95,97,	0,42700,58385,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	53998889	54007152	chr6:53998889-54007152	3	+	53998889	53998889	5263520	4	170,185,106,182,	0,2020,3724,8081,
#Partially deleted in new
chr6	54016478	54016777	chr6:54016478-54016777	7	-	54016478	54016478	16724991	1	299,	0,
#Partially deleted in new
chr6	54017958	54047594	chr6:54017958-54047594	0	-	54017958	54017958	8553170	4	209,95,60,303,	0,13648,14418,29333,
#Partially deleted in new
chr6	54018915	54266280	chr6:54018915-54266280	3	+	54019028	54265955	789624	13	176,156,393,72,66,84,60,45,45,129,204,54,331,	0,102531,105557,130140,141451,141600,141824,150612,170954,183189,211798,238392,247034,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	54018915	54218084	chr6:54018915-54218084	1	+	54019028	54215202	789624	12	176,156,393,1572,72,66,84,60,45,45,129,2945,	0,102531,105557,117799,130140,141451,141600,141824,150612,170954,183189,196224,
#Partially deleted in new
chr6	54018926	54266280	chr6:54018926-54266280	1	+	54019028	54265955	789624	8	165,393,66,60,45,45,129,331,	0,105546,141440,141813,150601,170943,183178,247023,
#Partially deleted in new
chr6	54018999	54266277	chr6:54018999-54266277	1	+	54019028	54265955	789624	6	92,393,45,45,129,328,	0,105473,150528,170870,183105,246950,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	54028883	54047594	chr6:54028883-54047594	0	-	54028883	54028883	8553170	5	568,95,60,76,105,	0,2723,3493,14468,18606,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	54029176	54047594	chr6:54029176-54047594	0	-	54029176	54029176	8553170	6	275,41,95,60,33,105,	0,1442,2430,3200,11864,18313,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	54029373	54047594	chr6:54029373-54047594	0	-	54029373	54029373	8553170	5	78,95,60,288,303,	0,2233,3003,16164,17918,
#Partially deleted in new
chr6	54030631	54047594	chr6:54030631-54047594	0	-	54030631	54030631	8553170	4	28,95,76,303,	0,975,12720,16660,
#Partially deleted in new
chr6	54031402	54047594	chr6:54031402-54047594	0	-	54031402	54031402	8553170	3	299,60,303,	0,974,15889,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	54045406	54047594	chr6:54045406-54047594	0	-	54045406	54045406	8553170	2	419,303,	0,1885,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	54045928	54047594	chr6:54045928-54047594	3	-	54045928	54045928	8553170	2	1231,303,	0,1363,
#Deleted in new
chr6	54046636	54047594	chr6:54046636-54047594	0	-	54046636	54046636	8553170	3	523,123,82,	0,655,876,
#Partially deleted in new
chr6	54047100	54079726	chr6:54047100-54079726	0	-	54047100	54047100	8553170	5	59,143,54,49,201,	0,191,10846,11821,32425,
#Partially deleted in new
chr6	54047137	54063340	chr6:54047137-54063340	0	-	54047137	54047137	8553170	4	22,143,49,74,	0,154,11784,16129,
#Partially deleted in new
chr6	54083424	54124617	chr6:54083424-54124617	0	+	54124607	54124617	8553170	3	59,156,145,	0,38022,41048,
#Partially deleted in new
chr6	54083537	54266280	chr6:54083537-54266280	1	+	54083583	54265955	789624	7	79,393,45,45,129,54,331,	0,40935,85990,106332,118567,173770,182412,
#Partially deleted in new
chr6	54099545	54202206	chr6:54099545-54202206	0	+	54124607	54202206	789624	8	62,156,393,72,66,45,45,102,	0,21901,24927,49510,60821,69982,90324,102559,
#Partially deleted in new
chr6	54099564	54136825	chr6:54099564-54136825	0	+	54124607	54136825	789624	4	43,156,393,111,	0,21882,24908,37150,
#Partially deleted in new
chr6	54111417	54137909	chr6:54111417-54137909	0	+	54111479	54137909	789624	3	158,393,1195,	0,13055,25297,
#Partially deleted in new
chr6	54111447	54266043	chr6:54111447-54266043	1	+	54111479	54265955	789624	14	128,156,393,1572,72,66,84,60,45,45,129,204,54,94,	0,9999,13025,25267,37608,48919,49068,49292,58080,78422,90657,119266,145860,154502,
#Partially deleted in new
chr6	54111509	54230802	chr6:54111509-54230802	0	+	54111509	54230802	789624	8	66,156,393,66,45,45,129,89,	0,9937,12963,48857,58018,78360,90595,119204,
#Partially deleted in new
chr6	54307858	54326840	chr6:54307858-54326840	0	+	54307858	54307858	8553170	5	108,309,64,90,39,	0,738,12720,13438,18943,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	54307965	54327210	chr6:54307965-54327210	1	+	54308065	54327146	789624	6	134,309,64,90,115,70,	0,631,12613,13331,18836,19175,
#Partially deleted in new
chr6	54308454	54390152	chr6:54308454-54390152	3	+	54308550	54389925	789624	11	451,64,90,115,124,151,181,46,124,46,362,	0,12124,12842,18347,34771,38912,41261,42897,46058,72071,81336,
#Partially deleted in new
chr6	54308572	54327006	chr6:54308572-54327006	1	+	54308604	54326958	789624	4	333,64,90,205,	0,12006,12724,18229,
#Partially deleted in new
chr6	54365334	54369971	chr6:54365334-54369971	3	-	54365334	54365334	8553170	3	185,174,61,	0,1670,4576,
#Deleted in new
chr6	54485168	54485850	chr6:54485168-54485850	7	-	54485168	54485168	16724991	1	682,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	54602486	54603150	chr6:54602486-54603150	7	-	54602486	54602486	16724991	1	664,	0,
#Deleted in new
chr6	54624604	54625488	chr6:54624604-54625488	7	+	54624604	54624604	16724991	1	884,	0,
#Deleted in new
chr6	54770582	54771134	chr6:54770582-54771134	7	+	54770582	54770582	16724991	1	552,	0,
#Deleted in new
chr6	54786386	54786492	chr6:54786386-54786492	3	+	54786386	54786386	8553170	1	106,	0,
#Deleted in new
chr6	54840117	54840855	chr6:54840117-54840855	3	-	54840117	54840117	8553170	2	371,215,	0,523,
#Partially deleted in new
chr6	54846770	54942022	chr6:54846770-54942022	3	+	54870246	54942007	0	5	56,504,165,125,2317,	0,23416,79600,80737,92935,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	54943166	54945099	chr6:54943166-54945099	3	+	54943166	54943166	8553170	1	1933,	0,
#Partially deleted in new
chr6	55106459	55282592	chr6:55106459-55282592	3	+	55174587	55282454	0	8	86,600,179,244,116,221,122,368,	0,67751,142179,148676,157247,170920,173863,175765,
#Partially deleted in new
chr6	55174251	55282620	chr6:55174251-55282620	1	+	55174587	55282454	0	7	559,179,244,116,221,122,396,	0,74387,80884,89455,103128,106071,107973,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	55327468	55402493	chr6:55327468-55402493	3	+	55327554	55401853	0	9	108,135,159,54,331,251,96,73,704,	0,4246,6317,22623,23784,31419,71711,71900,74321,
#Partially deleted in new
chr6	55434368	55579214	chr6:55434368-55579214	3	-	55435661	55579055	789624	9	1395,126,189,64,149,96,108,81,267,	0,5065,61050,64867,79679,82139,107360,107691,144579,
#Partially deleted in new
chr6	55434374	55579187	chr6:55434374-55579187	1	-	55435661	55579055	789624	10	1389,126,189,64,149,96,108,81,90,240,	0,5059,61044,64861,79673,82133,107354,107685,142703,144573,
#Partially deleted in new
chr6	55434379	55579099	chr6:55434379-55579099	0	-	55563860	55579055	789624	10	1384,126,189,64,149,96,108,81,96,152,	0,5054,61039,64856,79668,82128,107349,107680,129439,144568,
#Partially deleted in new
chr6	55434485	55579197	chr6:55434485-55579197	0	-	55566616	55579055	789624	10	1278,126,189,64,149,96,108,81,125,250,	0,4948,60933,64750,79562,82022,107243,107574,132018,144462,
#Partially deleted in new
chr6	55435315	55579166	chr6:55435315-55579166	1	-	55435661	55579055	789624	6	448,126,189,108,81,219,	0,4118,60103,106413,106744,143632,
#Partially deleted in new
chr6	55435352	55579105	chr6:55435352-55579105	1	-	55435661	55579055	789624	5	411,126,108,81,158,	0,4081,106376,106707,143595,
#Partially deleted in new
chr6	55435399	55579180	chr6:55435399-55579180	1	-	55435661	55579055	789624	8	364,126,189,64,149,108,81,233,	0,4034,60019,63836,78648,106329,106660,143548,
#Deleted in new
chr6	55435418	55439728	chr6:55435418-55439728	0	-	55435418	55435418	8553170	3	345,126,41,	0,4015,4269,
#Partially deleted in new
chr6	55512074	55579073	chr6:55512074-55579073	1	-	55514037	55579055	789624	4	2122,108,81,126,	0,29654,29985,66873,
#Deleted in new
chr6	55680641	55681021	chr6:55680641-55681021	7	-	55680641	55680641	16724991	1	380,	0,
#Partially deleted in new
chr6	55753644	55875564	chr6:55753644-55875564	3	-	55755532	55874865	789624	7	2038,111,77,195,149,193,1189,	0,5360,6812,20404,40634,66010,120731,
#Deleted in new
chr6	55939789	55940624	chr6:55939789-55940624	7	-	55939789	55939789	16724991	1	835,	0,
#Partially deleted in new
chr6	56056589	56247746	chr6:56056589-56247746	3	-	56057656	56182618	789624	30	1255,78,201,55,147,33,45,36,72,54,54,54,45,54,54,54,54,54,54,54,63,84,9,78,174,217,169,552,126,360,	0,2575,3428,4151,4301,5059,7988,10705,12456,14155,17642,18889,20939,44882,67472,67649,68977,69506,85195,85340,100297,107833,108224,110316,111534,114059,114370,122988,125941,190797,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr6	56056589	56394094	chr6:56056589-56394094	1	-	56057656	56182618	789624	29	1255,78,201,55,147,33,45,36,72,54,54,54,45,54,54,54,54,54,54,54,63,84,78,174,217,169,552,126,124,	0,2575,3428,4151,4301,5059,7988,10705,12456,14155,17642,18889,20939,44882,67472,67649,68977,69506,85195,85340,100297,107833,110316,111534,114059,114370,122988,125941,337381,
#Partially deleted in new
chr6	56056589	56125608	chr6:56056589-56125608	0	-	56078152	56125608	789624	18	1255,78,99,55,147,33,45,36,72,54,54,54,45,96,54,54,54,42,	0,2575,3428,4151,4301,5059,7988,10705,12456,14155,17642,18889,20939,21503,44882,67472,67649,68977,
#Partially deleted in new
chr6	56056590	56091661	chr6:56056590-56091661	0	-	56056590	56056590	8553170	14	1254,78,201,55,145,33,45,36,72,54,54,54,45,165,	0,2574,3427,4150,4300,5058,7987,10704,12455,14154,17641,18888,20938,34906,
#Partially deleted in new
chr6	56057319	56247435	chr6:56057319-56247435	1	-	56057656	56182618	789624	30	525,78,201,55,147,33,45,36,72,54,54,54,45,54,54,54,54,54,54,54,63,86,82,174,217,169,552,126,74,49,	0,1845,2698,3421,3571,4329,7258,9975,11726,13425,16912,18159,20209,44152,66742,66919,68247,68776,84465,84610,99567,107103,109582,110804,113329,113640,122258,125211,173741,190067,
#Partially deleted in new
chr6	56057669	56061177	chr6:56057669-56061177	0	-	56057669	56057669	8553170	3	175,78,1160,	0,1495,2348,
#Deleted in new
chr6	56060070	56064609	chr6:56060070-56064609	0	-	56060070	56060070	8553170	5	10,55,147,33,32,	0,670,820,1578,4507,
#Deleted in new
chr6	56068769	56077573	chr6:56068769-56077573	0	-	56068769	56068769	8553170	5	348,54,54,54,45,	0,1975,5462,6709,8759,
#Deleted in new
chr6	56075508	56078102	chr6:56075508-56078102	0	-	56075508	56075508	8553170	2	24,574,	0,2020,
#Deleted in new
chr6	56125390	56126643	chr6:56125390-56126643	0	-	56125390	56125390	8553170	2	230,548,	0,705,
#Partially deleted in new
chr6	56125427	56166937	chr6:56125427-56166937	0	-	56125530	56166937	789624	7	193,54,54,54,84,9,32,	0,668,16357,16502,38995,39386,41478,
#Partially deleted in new
chr6	56179808	56247437	chr6:56179808-56247437	0	-	56179808	56182618	789624	5	321,126,52,74,51,	0,2722,46051,51252,67578,
#Deleted in new
chr6	56276528	56276796	chr6:56276528-56276796	7	-	56276528	56276528	16724991	1	268,	0,
#Partially deleted in new
chr6	56331787	56332117	chr6:56331787-56332117	3	-	56331787	56331787	8553170	1	330,	0,
#Deleted in new
chr6	56431949	56433213	chr6:56431949-56433213	7	-	56431949	56431949	16724991	1	1264,	0,
#Partially deleted in new
chr6	56457986	56642996	chr6:56457986-56642996	1	-	56459004	56642788	789624	84	1281,124,111,200,118,18,75,155,163,164,130,189,144,129,195,160,170,120,207,156,171,129,198,156,174,102,102,123,227,232,204,219,108,120,207,242,85,327,160,167,171,162,1472,496,200,130,242,63,127,157,167,318,209,124,177,531,267,234,153,136,89,129,99,108,84,163,194,139,179,158,184,127,155,153,126,96,105,162,78,129,463,155,94,375,	0,2144,5059,5578,8091,10995,11896,12141,13119,14072,15886,18162,19358,24063,24696,27325,29117,31503,34240,34947,36023,39392,39869,43093,43533,46010,48456,48680,50542,51655,53210,57463,59211,59514,68374,69506,70854,71461,71987,74357,77135,78792,94197,97358,99332,102307,103321,104151,110482,111869,114113,114760,115692,120827,134195,135676,139753,140489,142082,152440,153521,156369,166543,167170,169217,170012,171263,172258,173224,173896,174867,176145,176475,176814,177602,178570,181272,181463,181709,181942,182156,183960,184423,184635,
#Partially deleted in new
chr6	56457988	56851916	chr6:56457988-56851916	3	-	56459004	56851790	789624	95	1279,124,111,200,118,18,75,155,163,164,130,189,144,129,195,160,170,120,207,156,171,129,198,156,174,102,102,123,227,232,204,219,108,120,207,242,85,327,160,167,171,162,1472,496,200,130,242,63,127,157,167,318,209,124,177,531,267,234,153,136,89,129,99,108,84,163,194,139,179,158,184,127,155,153,126,96,105,162,78,129,463,155,94,128,96,120,107,113,167,93,78,90,62,208,129,	0,2142,5057,5576,8089,10993,11894,12139,13117,14070,15884,18160,19356,24061,24694,27323,29115,31501,34238,34945,36021,39390,39867,43091,43531,46008,48454,48678,50540,51653,53208,57461,59209,59512,68372,69504,70852,71459,71985,74355,77133,78790,94195,97356,99330,102305,103319,104149,110480,111867,114111,114758,115690,120825,134193,135674,139751,140487,142080,152438,153519,156367,166541,167168,169215,170010,171261,172256,173222,173894,174865,176143,176473,176812,177600,178568,181270,181461,181707,181940,182154,183958,184421,187877,188098,190581,192937,193143,212652,241664,243899,246291,277239,393408,393799,
#Partially deleted in new
chr6	56457988	56843665	chr6:56457988-56843665	1	-	56459004	56843145	789624	94	1279,124,111,200,118,18,75,155,163,164,130,189,144,129,195,160,170,120,207,156,171,129,198,156,174,102,102,123,227,232,204,219,108,120,207,242,85,327,160,167,171,162,1472,496,200,130,242,63,127,157,167,318,209,124,177,531,267,234,153,136,89,129,99,108,84,163,194,139,179,158,184,127,155,153,126,96,105,162,78,129,463,155,94,128,96,120,107,113,167,93,78,90,62,611,	0,2142,5057,5576,8089,10993,11894,12139,13117,14070,15884,18160,19356,24061,24694,27323,29115,31501,34238,34945,36021,39390,39867,43091,43531,46008,48454,48678,50540,51653,53208,57461,59209,59512,68372,69504,70852,71459,71985,74355,77133,78790,94195,97356,99330,102305,103319,104149,110480,111867,114111,114758,115690,120825,134193,135674,139751,140487,142080,152438,153519,156367,166541,167168,169215,170010,171261,172256,173222,173894,174865,176143,176473,176812,177600,178568,181270,181461,181707,181940,182154,183958,184421,187877,188098,190581,192937,193143,212652,241664,243899,246291,277239,385066,
#Partially deleted in new
chr6	56457995	56843665	chr6:56457995-56843665	1	-	56459004	56843145	789624	93	1272,124,200,72,118,18,75,155,163,164,130,189,144,129,195,160,170,120,207,156,171,129,198,156,174,102,102,123,227,232,204,219,108,120,207,242,85,160,167,171,162,1472,496,200,130,242,63,127,157,167,318,209,124,177,531,267,234,153,136,89,129,99,108,84,163,194,139,179,158,184,127,155,153,126,96,105,162,78,129,463,155,94,128,96,120,107,113,167,93,78,90,62,611,	0,2135,5569,6689,8082,10986,11887,12132,13110,14063,15877,18153,19349,24054,24687,27316,29108,31494,34231,34938,36014,39383,39860,43084,43524,46001,48447,48671,50533,51646,53201,57454,59202,59505,68365,69497,70845,71978,74348,77126,78783,94188,97349,99323,102298,103312,104142,110473,111860,114104,114751,115683,120818,134186,135667,139744,140480,142073,152431,153512,156360,166534,167161,169208,170003,171254,172249,173215,173887,174858,176136,176466,176805,177593,178561,181263,181454,181700,181933,182147,183951,184414,187870,188091,190574,192930,193136,212645,241657,243892,246284,277232,385059,
#Partially deleted in new
chr6	56458059	56469956	chr6:56458059-56469956	0	-	56459004	56469956	789624	5	1208,124,200,118,74,	0,2071,5505,8018,11823,
#Deleted in new
chr6	56458238	56464316	chr6:56458238-56464316	0	-	56458238	56458238	8553170	4	1029,124,111,752,	0,1892,4807,5326,
#Deleted in new
chr6	56458238	56462068	chr6:56458238-56462068	0	-	56458238	56458238	8553170	2	1029,1938,	0,1892,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	56458244	56467476	chr6:56458244-56467476	0	-	56458244	56458244	8553170	5	1023,124,111,200,1399,	0,1886,4801,5320,7833,
#Partially deleted in new
chr6	56458967	56843153	chr6:56458967-56843153	1	-	56459004	56843145	789624	98	300,124,200,72,118,18,75,155,163,164,130,189,144,129,195,160,170,120,207,156,171,129,198,156,174,102,102,123,227,232,204,219,108,120,207,242,85,160,167,171,162,1472,496,200,130,242,63,127,157,167,318,209,124,177,531,267,234,153,234,150,216,150,5508,136,89,129,99,108,84,163,194,139,179,158,184,127,155,153,126,96,105,162,78,129,463,155,94,128,96,120,107,113,167,93,78,90,62,99,	0,1163,4597,5717,7110,10014,10915,11160,12138,13091,14905,17181,18377,23082,23715,26344,28136,30522,33259,33966,35042,38411,38888,42112,42552,45029,47475,47699,49561,50674,52229,56482,58230,58533,67393,68525,69873,71006,73376,76154,77811,93216,96377,98351,101326,102340,103170,109501,110888,113132,113779,114711,119846,133214,134695,138772,139508,141101,142475,143914,144237,144596,144869,151459,152540,155388,165562,166189,168236,169031,170282,171277,172243,172915,173886,175164,175494,175833,176621,177589,180291,180482,180728,180961,181175,182979,183442,186898,187119,189602,191958,192164,211673,240685,242920,245312,276260,384087,
#Partially deleted in new
chr6	56459263	56467048	chr6:56459263-56467048	0	-	56459263	56459263	8553170	6	4,124,111,200,118,114,	0,867,3782,4301,6814,7671,
#Deleted in new
chr6	56464350	56466113	chr6:56464350-56466113	0	-	56464350	56464350	8553170	2	406,36,	0,1727,
#Partially deleted in new
chr6	56471850	56473990	chr6:56471850-56473990	0	-	56471968	56473990	789624	2	372,118,	0,2022,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	56472146	56474358	chr6:56472146-56474358	0	-	56472146	56472146	8553170	2	76,486,	0,1726,
#Partially deleted in new
chr6	56476180	56482592	chr6:56476180-56482592	0	-	56476180	56476180	8553170	3	157,144,543,	0,1164,5869,
#Partially deleted in new
chr6	56483528	56492243	chr6:56483528-56492243	0	-	56483528	56483528	8553170	4	1943,170,120,17,	0,3575,5961,8698,
#Partially deleted in new
chr6	56493032	56497734	chr6:56493032-56497734	0	-	56493032	56493032	8553170	3	57,171,356,	0,977,4346,
#Partially deleted in new
chr6	56494064	56541572	chr6:56494064-56541572	0	-	56494064	56541572	789624	23	116,129,198,156,174,102,102,123,227,232,204,219,108,120,207,242,85,327,160,167,171,162,1293,	0,3314,3791,7015,7455,9932,12378,12602,14464,15577,17132,21385,23133,23436,32296,33428,34776,35383,35909,38279,41057,42714,46215,
#Partially deleted in new
chr6	56535188	56542808	chr6:56535188-56542808	0	-	56535188	56535208	8553170	3	104,162,303,	0,1590,7317,
#Partially deleted in new
chr6	56555607	56560442	chr6:56555607-56560442	0	-	56555607	56555607	8553170	3	233,200,149,	0,1711,4686,
#Partially deleted in new
chr6	56572099	56598513	chr6:56572099-56598513	0	-	56573011	56598513	789624	8	167,318,156,124,177,531,267,38,	0,647,1632,6714,20082,21563,25640,26376,
#Partially deleted in new
chr6	56603836	56642788	chr6:56603836-56642788	0	-	56603836	56642788	789624	26	5508,136,89,129,99,108,84,163,194,139,179,158,184,127,155,153,126,96,105,162,78,129,463,155,94,167,	0,6590,7671,10519,20693,21320,23367,24162,25413,26408,27374,28046,29017,30295,30625,30964,31752,32720,35422,35613,35859,36092,36306,38110,38573,38785,
#Partially deleted in new
chr6	56614463	56851951	chr6:56614463-56851951	0	-	56614463	56851790	789624	34	21,99,108,84,163,194,139,179,158,184,127,155,153,126,96,105,162,78,129,463,155,94,128,96,120,107,113,167,93,78,90,62,208,164,	0,10066,10693,12740,13535,14786,15781,16747,17419,18390,19668,19998,20337,21125,22093,24795,24986,25232,25465,25679,27483,27946,31402,31623,34106,36462,36668,56177,85189,87424,89816,120764,236933,237324,
#Partially deleted in new
chr6	56614575	56642896	chr6:56614575-56642896	1	-	56615516	56642788	789624	24	2843,2730,99,108,84,163,194,139,179,158,184,127,155,153,126,96,105,162,78,129,463,155,94,275,	0,3410,9954,10581,12628,13423,14674,15669,16635,17307,18278,19556,19886,20225,21013,21981,24683,24874,25120,25353,25567,27371,27834,28046,
#Partially deleted in new
chr6	56617199	56628018	chr6:56617199-56628018	0	-	56617199	56628018	789624	5	219,99,108,84,20,	0,7330,7957,10004,10799,
#Partially deleted in new
chr6	56624372	56642860	chr6:56624372-56642860	1	-	56624415	56642788	789624	22	256,108,84,163,194,139,179,158,184,127,155,153,126,96,105,162,78,129,463,155,94,239,	0,784,2831,3626,4877,5872,6838,7510,8481,9759,10089,10428,11216,12184,14886,15077,15323,15556,15770,17574,18037,18249,
#Partially deleted in new
chr6	56638915	56851717	chr6:56638915-56851717	0	-	56638915	56638915	8553170	18	448,162,78,129,463,155,94,128,96,120,107,113,167,93,78,90,62,321,	0,534,780,1013,1227,3031,3494,6950,7171,9654,12010,12216,31725,60737,62972,65364,96312,212481,
#Partially deleted in new
chr6	56638935	56693303	chr6:56638935-56693303	0	-	56638935	56638935	8553170	14	428,162,78,129,463,155,94,128,96,120,107,113,167,916,	0,514,760,993,1207,3011,3474,6930,7151,9634,11990,12196,31705,53452,
#Partially deleted in new
chr6	56640466	56954628	chr6:56640466-56954628	0	-	56640466	56954587	789624	17	139,155,94,128,96,120,107,113,167,93,78,90,62,208,201,35,222,	0,1480,1943,5399,5620,8103,10459,10665,30174,59186,61421,63813,94761,210930,259954,313318,313940,
#Deleted in new
chr6	56642186	56642889	chr6:56642186-56642889	0	-	56642186	56642186	8553170	2	317,268,	0,435,
#Partially deleted in new
chr6	56670487	56843146	chr6:56670487-56843146	0	-	56670487	56670487	8553170	6	320,93,78,90,62,92,	0,29165,31400,33792,64740,172567,
#Partially deleted in new
chr6	56670657	56693149	chr6:56670657-56693149	0	-	56670657	56693149	789624	2	150,762,	0,21730,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	56670674	56785879	chr6:56670674-56785879	0	-	56670674	56735233	789624	6	133,93,78,90,62,109,	0,28978,31213,33605,64553,115096,
#Partially deleted in new
chr6	56670738	56843215	chr6:56670738-56843215	0	-	56670738	56742340	789624	7	69,93,78,90,62,135,18,	0,28914,31149,33541,64489,71532,172459,
#Partially deleted in new
chr6	56735057	56851901	chr6:56735057-56851901	0	-	56735057	56735057	8553170	3	232,208,114,	0,116339,116730,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	56844001	56864078	chr6:56844001-56864078	3	+	56844001	56844001	789624	4	65,88,174,224,	0,17826,19069,19853,
#Deleted in new
chr6	56851098	56851858	chr6:56851098-56851858	0	-	56851098	56851098	8553170	2	506,71,	0,689,
#Deleted in new
chr6	56871190	56871743	chr6:56871190-56871743	7	+	56871190	56871190	16724991	1	553,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	56945729	56945836	chr6:56945729-56945836	3	+	56945729	56945729	8553170	1	107,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	56955125	57010944	chr6:56955125-57010944	1	+	56981810	57008203	789624	4	335,220,178,2764,	0,26585,37252,53055,
#Partially deleted in new
chr6	56955291	57027342	chr6:56955291-57027342	3	+	56981810	57018548	789624	7	169,220,178,221,193,137,1261,	0,26419,37086,59841,61915,63129,70790,
#Partially deleted in new
chr6	56955371	57015160	chr6:56955371-57015160	1	+	56981810	57015160	789624	5	89,220,178,64,28,	0,26339,37006,59090,59761,
#Partially deleted in new
chr6	56975605	56976062	chr6:56975605-56976062	7	-	56975605	56975605	16724991	1	457,	0,
#Deleted in new
chr6	57004519	57004799	chr6:57004519-57004799	7	+	57004519	57004519	16724991	1	280,	0,
#Partially deleted in new
chr6	57013808	57018471	chr6:57013808-57018471	0	+	57013808	57013808	8553170	5	215,64,221,193,51,	0,653,1324,3398,4612,
#Partially deleted in new
chr6	57029520	57029988	chr6:57029520-57029988	7	+	57029520	57029520	16724991	1	468,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	57046531	57055239	chr6:57046531-57055239	1	+	57046755	57054863	789624	3	245,84,2554,	0,781,6154,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	57046548	57055225	chr6:57046548-57055225	3	+	57046755	57054863	789624	4	228,84,81,2540,	0,764,4225,6137,
#Partially deleted in new
chr6	57046746	57053046	chr6:57046746-57053046	0	+	57046746	57046746	8553170	4	175,84,81,361,	0,566,4027,5939,
#Partially deleted in new
chr6	57086843	57133154	chr6:57086843-57133154	0	+	57128833	57133154	789624	6	65,84,81,126,112,113,	0,3967,12217,37890,41885,46198,
#Partially deleted in new
chr6	57090009	57170307	chr6:57090009-57170307	1	+	57090253	57168469	0	15	265,84,81,126,112,151,127,154,148,1604,144,131,187,69,1885,	0,801,9051,34724,38719,43032,44734,51292,51938,57080,60709,62211,63851,71074,78413,
#Partially deleted in new
chr6	57090009	57133176	chr6:57090009-57133176	0	+	57090253	57133176	789624	5	265,81,126,112,135,	0,9051,34724,38719,43032,
#Partially deleted in new
chr6	57090029	57170201	chr6:57090029-57170201	1	+	57090253	57168469	0	14	245,84,81,126,112,151,127,154,148,1604,131,187,69,1779,	0,781,9031,34704,38699,43012,44714,51272,51918,57060,62191,63831,71054,78393,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	57090075	57109716	chr6:57090075-57109716	3	+	57090253	57102096	0	4	199,84,81,9114,	0,735,8985,10527,
#Partially deleted in new
chr6	57090076	57124523	chr6:57090076-57124523	1	+	57090253	57124464	789624	4	198,84,81,95,	0,734,8984,34352,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	57090112	57151371	chr6:57090112-57151371	0	+	57090112	57090112	8553170	11	162,84,81,126,112,151,127,154,148,1604,653,	0,698,8948,34621,38616,42929,44631,51189,51835,56977,60606,
#Partially deleted in new
chr6	57090138	57128810	chr6:57090138-57128810	0	+	57090253	57099510	789624	6	136,84,81,100,126,82,	0,672,8922,9330,34595,38590,
#Partially deleted in new
chr6	57090168	57100953	chr6:57090168-57100953	0	+	57090253	57100953	789624	3	106,81,351,	0,8892,10434,
#Partially deleted in new
chr6	57090188	57154544	chr6:57090188-57154544	1	+	57090253	57154103	789624	13	86,84,81,126,112,151,127,154,148,1604,144,131,684,	0,622,8872,34545,38540,42853,44555,51113,51759,56901,60530,62032,63672,
#Partially deleted in new
chr6	57090206	57099610	chr6:57090206-57099610	1	+	57090253	57099510	789624	4	68,84,81,142,	0,604,8854,9262,
#Partially deleted in new
chr6	57090210	57141368	chr6:57090210-57141368	0	+	57090253	57124788	789624	8	64,62,81,126,112,151,127,67,	0,622,8850,34523,38518,42831,44533,51091,
#Partially deleted in new
chr6	57090224	57168632	chr6:57090224-57168632	0	+	57090253	57142004	789624	5	50,84,148,69,210,	0,586,51723,70859,78198,
#Partially deleted in new
chr6	57090782	57128786	chr6:57090782-57128786	0	+	57090782	57090782	8553170	5	112,81,100,126,58,	0,8278,8686,33951,37946,
#Partially deleted in new
chr6	57091429	57100789	chr6:57091429-57100789	0	+	57091429	57091429	8553170	4	23,267,81,187,	0,1355,7631,9173,
#Partially deleted in new
chr6	57102560	57126599	chr6:57102560-57126599	0	+	57102560	57102560	8553170	3	319,126,68,	0,22173,23971,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	57114893	57171049	chr6:57114893-57171049	0	-	57114893	57114893	8553170	2	365,45,	0,56111,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	57114900	57171049	chr6:57114900-57171049	0	-	57114900	57114900	8553170	4	358,108,69,45,	0,555,19246,56104,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	57114900	57171049	chr6:57114900-57171049	0	-	57114900	57114900	8553170	6	358,108,90,122,69,45,	0,555,1137,1525,19246,56104,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	57114900	57171049	chr6:57114900-57171049	2	-	57114900	57114900	8553170	5	358,108,90,69,45,	0,555,1137,19246,56104,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	57114900	57172242	chr6:57114900-57172242	1	-	57114900	57114900	8553170	3	358,94,169,	0,56104,57173,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	57114910	57172422	chr6:57114910-57172422	1	-	57114910	57114910	789624	4	348,108,94,349,	0,545,56094,57163,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	57114910	57171049	chr6:57114910-57171049	0	-	57114910	57114910	8553170	4	348,108,122,45,	0,545,1515,56094,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	57114915	57171049	chr6:57114915-57171049	0	-	57114915	57114915	8553170	5	343,108,69,84,45,	0,540,19231,36907,56089,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	57114923	57171049	chr6:57114923-57171049	0	-	57114923	57114923	8553170	5	335,108,82,168,45,	0,532,1916,36104,56081,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	57114925	57171049	chr6:57114925-57171049	0	-	57114925	57114925	8553170	5	333,108,69,168,45,	0,530,19221,36102,56079,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	57147831	57171049	chr6:57147831-57171049	0	-	57147831	57147831	8553170	4	440,168,84,45,	0,3196,3991,23173,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	57150513	57171049	chr6:57150513-57171049	0	-	57150513	57150513	8553170	2	682,45,	0,20491,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	57150804	57171049	chr6:57150804-57171049	1	-	57150804	57150804	8553170	3	391,84,45,	0,1018,20200,
#Partially deleted in new
chr6	57152156	57154160	chr6:57152156-57154160	0	+	57152156	57152156	8553170	2	195,300,	0,1704,
#Partially deleted in new
chr6	57160807	57168833	chr6:57160807-57168833	0	+	57160807	57160807	8553170	2	345,411,	0,7615,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	57164880	57171049	chr6:57164880-57171049	0	-	57164880	57164880	8553170	2	553,45,	0,6124,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	57164880	57171049	chr6:57164880-57171049	0	-	57164880	57164880	8553170	2	463,45,	0,6124,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	57165005	57171049	chr6:57165005-57171049	0	-	57165005	57165005	8553170	2	797,45,	0,5999,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	57165176	57171049	chr6:57165176-57171049	0	-	57165176	57165176	8553170	2	599,45,	0,5828,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	57165218	57171049	chr6:57165218-57171049	0	-	57165218	57165218	8553170	2	622,45,	0,5786,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	57170192	57171049	chr6:57170192-57171049	0	-	57170192	57170192	8553170	1	857,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	57171002	57173135	chr6:57171002-57173135	0	-	57171002	57171002	8553170	3	96,132,56,	0,1071,2077,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	57171004	57174236	chr6:57171004-57174236	0	-	57171004	57171004	8553170	3	94,105,500,	0,2371,2732,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	57172325	57189833	chr6:57172325-57189833	3	+	57172697	57184190	789624	3	485,110,6056,	0,9706,11452,
#Partially deleted in new
chr6	57186991	57222314	chr6:57186991-57222314	3	-	57190460	57210380	789624	7	3609,93,83,157,86,220,589,	0,6850,7778,9458,20636,23234,34734,
#Partially deleted in new
chr6	57188782	57221407	chr6:57188782-57221407	1	-	57190460	57210380	789624	7	1818,93,83,157,86,220,89,	0,5059,5987,7667,18845,21443,32536,
#Partially deleted in new
chr6	57314804	57326370	chr6:57314804-57326370	1	+	57318445	57326063	0	5	116,163,104,80,446,	0,3632,5652,9396,11120,
#Partially deleted in new
chr6	57317623	57326363	chr6:57317623-57326363	1	+	57318445	57326063	0	5	78,163,104,80,439,	0,813,2833,6577,8301,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	57317623	57646849	chr6:57317623-57646849	3	+	57318445	57646158	0	14	78,163,104,80,121,96,138,68,73,186,127,83,69,922,	0,813,2833,6577,8301,62277,64407,189763,214787,219816,283469,288751,314509,328304,
#Partially deleted in new
chr6	57317627	57383589	chr6:57317627-57383589	0	+	57317627	57317627	8553170	7	74,163,104,80,121,96,1559,	0,809,2829,6573,8297,62273,64403,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	57379946	57435192	chr6:57379946-57435192	0	+	57379946	57379946	8553170	3	50,138,222,	0,2084,55024,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	57390131	57390212	chr6:57390131-57390212	3	+	57390131	57390131	5263520	1	81,	0,
#Partially deleted in new
chr6	57493854	57497691	chr6:57493854-57497691	3	+	57493854	57493854	8553170	2	110,235,	0,3602,
#Partially deleted in new
chr6	57505168	57537625	chr6:57505168-57537625	0	+	57505168	57505168	8553170	4	159,68,73,186,	0,2218,27242,32271,
#Partially deleted in new
chr6	57532410	57587111	chr6:57532410-57587111	0	+	57532410	57587016	789624	3	73,186,116,	0,5029,54585,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	57855890	57856468	chr6:57855890-57856468	3	-	57855890	57855890	8553170	1	578,	0,
#Deleted in new
chr6	57902608	57903148	chr6:57902608-57903148	3	-	57902608	57902608	8553170	1	540,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	57908559	57913911	chr6:57908559-57913911	3	-	57908559	57908559	8553170	1	5352,	0,
#Partially deleted in new
chr6	57919783	57930291	chr6:57919783-57930291	7	-	57919783	57919783	16724991	5	136,175,85,88,188,	0,4633,6642,9261,10320,
#Partially deleted in new
chr6	57919911	57961382	chr6:57919911-57961382	0	-	57919911	57919911	789624	6	8,175,85,188,84,62,	0,4505,6514,10192,39116,41409,
#Partially deleted in new
chr6	57919911	57961382	chr6:57919911-57961382	3	-	57919911	57919911	789624	7	8,175,85,188,84,73,62,	0,4505,6514,10192,39116,41240,41409,
#Deleted in new
chr6	57937457	57939015	chr6:57937457-57939015	7	+	57937457	57937457	16724991	1	1558,	0,
#Partially deleted in new
chr6	57946073	57961501	chr6:57946073-57961501	5	-	57946073	57946073	16724991	5	1104,151,84,73,181,	0,2844,12954,15078,15247,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	57946077	57961380	chr6:57946077-57961380	4	-	57946077	57946077	16724991	6	1100,151,153,84,73,60,	0,2840,3781,12950,15074,15243,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	57946077	57961380	chr6:57946077-57961380	4	-	57946077	57946077	16724991	6	1100,196,153,84,73,60,	0,2795,3781,12950,15074,15243,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	57946082	57950399	chr6:57946082-57950399	4	-	57946082	57946082	16724991	2	1095,1527,	0,2790,
#Partially deleted in new
chr6	57946546	57961424	chr6:57946546-57961424	4	-	57946546	57946546	16724991	5	631,196,84,73,104,	0,2326,12481,14605,14774,
#Partially deleted in new
chr6	57959028	57961345	chr6:57959028-57961345	7	-	57959028	57959028	16724991	3	83,73,25,	0,2123,2292,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	57961437	57973690	chr6:57961437-57973690	1	+	57961437	57961437	8553170	5	305,68,227,62,1597,	0,743,4079,10157,10656,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	57961547	57972280	chr6:57961547-57972280	0	+	57961547	57961547	8553170	3	195,62,187,	0,10047,10546,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	57961656	58096507	chr6:57961656-58096507	1	+	57961656	57961656	8553170	8	86,68,227,62,52,93,210,737,	0,524,3860,9938,66015,81778,130247,134114,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	57962077	58438364	chr6:57962077-58438364	3	+	57962077	57962077	8553170	6	171,52,93,140,146,1121,	0,65594,81357,200532,474481,475166,
#Deleted in new
chr6	57967686	57968661	chr6:57967686-57968661	7	-	57967686	57967686	16724991	1	975,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	58038432	58332065	chr6:58038432-58332065	1	+	58038432	58038432	8553170	7	57,93,140,73,122,63,546,	0,5002,124177,262306,271863,287053,293087,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	58038465	58188234	chr6:58038465-58188234	0	+	58038465	58038465	8553170	4	91,93,140,1009,	0,4969,124144,148760,
#Deleted in new
chr6	58071719	58073134	chr6:58071719-58073134	7	-	58071719	58071719	16724991	1	1415,	0,
#Partially deleted in new
chr6	58119740	58121029	chr6:58119740-58121029	7	-	58119740	58119740	16724991	1	1289,	0,
#Deleted in new
chr6	58386798	58386961	chr6:58386798-58386961	7	+	58386798	58386798	16724991	1	163,	0,
#Partially deleted in new
chr6	60281443	60544955	chr6:60281443-60544955	7	+	60281443	60281443	16724991	9	96,138,68,73,186,127,83,69,231,	0,2124,118807,143923,148943,217889,223168,249776,263281,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	60353962	60546660	chr6:60353962-60546660	5	+	60353962	60353962	16724991	7	242,68,186,127,83,69,1936,	0,46288,76424,145370,150649,177257,190762,
#Deleted in new
chr6	60719221	60720196	chr6:60719221-60720196	7	-	60719221	60719221	16724991	1	975,	0,
#Deleted in new
chr6	60723147	60723898	chr6:60723147-60723898	3	+	60723147	60723147	8553170	2	62,253,	0,498,
#Deleted in new
chr6	60826184	60826533	chr6:60826184-60826533	7	-	60826184	60826184	16724991	1	349,	0,
#Partially deleted in new
chr6	60873359	60874642	chr6:60873359-60874642	7	-	60873359	60873359	16724991	1	1283,	0,
#Partially deleted in new
chr6	61240897	61241311	chr6:61240897-61241311	7	+	61240897	61240897	16724991	1	414,	0,
#Partially deleted in new
chr6	61574327	61574402	chr6:61574327-61574402	7	+	61574327	61574327	16724991	1	75,	0,
#Partially deleted in new
chr6	61630232	61681049	chr6:61630232-61681049	3	-	61630232	61630232	8553170	6	269,63,34,83,61,163,	0,22022,28884,31049,48654,50654,
#Partially deleted in new
chr6	61679959	62286227	chr6:61679959-62286227	3	-	61680962	62285948	789624	9	1101,59,83,199,128,147,117,128,370,	0,17235,52722,214675,221284,298106,367918,497225,605898,
#Deleted in new
chr6	62460939	62461503	chr6:62460939-62461503	7	-	62460939	62460939	16724991	1	564,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	62547426	62548272	chr6:62547426-62548272	7	+	62547426	62547426	16724991	2	141,251,	0,595,
#Deleted in new
chr6	62611152	62611327	chr6:62611152-62611327	7	-	62611152	62611152	16724991	1	175,	0,
#Partially deleted in new
chr6	63193071	63193630	chr6:63193071-63193630	7	-	63193071	63193071	16724991	1	559,	0,
#Partially deleted in new
chr6	63211445	63213024	chr6:63211445-63213024	3	+	63211556	63211883	789624	1	1579,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	63227484	63227743	chr6:63227484-63227743	7	+	63227484	63227484	16724991	1	259,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	63229086	63230110	chr6:63229086-63230110	7	-	63229086	63229086	16724991	1	1024,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	63275950	63319977	chr6:63275950-63319977	1	-	63280502	63319943	789624	5	4650,199,167,133,64,	0,5071,9636,18962,43963,
#Partially deleted in new
chr6	63279382	63319977	chr6:63279382-63319977	0	-	63279382	63319943	789624	5	45,199,167,133,64,	0,1639,6204,15530,40531,
#Partially deleted in new
chr6	63279635	63319977	chr6:63279635-63319977	3	-	63280020	63319943	789624	4	1585,167,133,64,	0,5951,15277,40278,
#Partially deleted in new
chr6	63280020	63319943	chr6:63280020-63319943	1	-	63285696	63319943	789624	5	1145,115,189,133,30,	0,5566,13647,14892,39893,
#Partially deleted in new
chr6	63392221	63392606	chr6:63392221-63392606	7	+	63392221	63392221	16724991	1	385,	0,
#Partially deleted in new
chr6	63395006	63397106	chr6:63395006-63397106	7	-	63395006	63395006	16724991	5	1147,207,68,81,45,	0,1268,1611,1878,2055,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	63440765	63443580	chr6:63440765-63443580	7	+	63440765	63440765	16724991	3	137,692,139,	0,427,2676,
#Partially deleted in new
chr6	63480133	63481876	chr6:63480133-63481876	7	+	63480133	63480133	16724991	2	447,101,	0,1642,
#Partially deleted in new
chr6	63521745	63583377	chr6:63521745-63583377	3	+	63576880	63580174	789624	8	81,266,194,550,93,131,75,3321,	0,6073,10591,54690,56691,57152,57511,58311,
#Partially deleted in new
chr6	63521747	63576985	chr6:63521747-63576985	0	+	63576880	63576985	8553170	4	79,266,194,550,	0,6071,28552,54688,
#Partially deleted in new
chr6	63521760	63576582	chr6:63521760-63576582	0	+	63521760	63521760	8553170	3	66,266,147,	0,6058,54675,
#Deleted in new
chr6	63548707	63549508	chr6:63548707-63549508	7	-	63548707	63548707	16724991	1	801,	0,
#Deleted in new
chr6	63571004	63572408	chr6:63571004-63572408	3	-	63571004	63571004	8553170	1	1404,	0,
#Partially deleted in new
chr6	63572011	63583587	chr6:63572011-63583587	3	+	63572680	63576531	0	6	708,550,93,131,75,3531,	0,4424,6425,6886,7245,8045,
#Deleted in new
chr6	63573237	63576697	chr6:63573237-63576697	0	+	63573237	63573237	8553170	2	376,262,	0,3198,
#Partially deleted in new
chr6	63576487	63581462	chr6:63576487-63581462	1	+	63576880	63580174	0	5	498,93,131,75,1406,	0,1949,2410,2769,3569,
#Partially deleted in new
chr6	63576880	63580174	chr6:63576880-63580174	1	+	63576880	63580174	789624	4	105,93,131,118,	0,1556,2017,3176,
#Partially deleted in new
chr6	63612760	63612903	chr6:63612760-63612903	7	-	63612760	63612760	16724991	1	143,	0,
#Deleted in new
chr6	63615826	63616361	chr6:63615826-63616361	7	-	63615826	63615826	16724991	1	535,	0,
#Partially deleted in new
chr6	63635819	63709214	chr6:63635819-63709214	0	+	63684280	63709214	789624	12	331,1783,307,184,145,157,117,132,136,196,148,64,	0,48309,55917,58761,62403,62629,64530,66688,67716,70209,70909,73331,
#Partially deleted in new
chr6	63635822	63698245	chr6:63635822-63698245	0	+	63680019	63698245	789624	6	328,162,1783,307,184,23,	0,44177,48306,55914,58758,62400,
#Partially deleted in new
chr6	63635824	63712363	chr6:63635824-63712363	0	+	63691740	63712363	789624	14	326,162,307,184,145,157,117,132,136,196,148,90,196,778,	0,44175,55912,58756,62398,62624,64525,66683,67711,70204,70904,73326,75342,75761,
#Partially deleted in new
chr6	63635835	63715481	chr6:63635835-63715481	3	+	63646551	63713708	0	16	315,269,162,1783,307,184,145,157,117,132,136,196,148,90,196,3896,	0,10691,44164,48293,55901,58745,62387,62613,64514,66672,67700,70193,70893,73315,75331,75750,
#Partially deleted in new
chr6	63635835	63694690	chr6:63635835-63694690	0	+	63646692	63694690	789624	6	315,177,162,1783,307,110,	0,10783,44164,48293,55901,58745,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr6	63636110	63714454	chr6:63636110-63714454	0	+	63646551	63678832	789624	17	40,269,193,162,1783,307,184,145,157,117,132,136,196,148,90,196,2869,	0,10416,42717,43889,48018,55626,58470,62112,62338,64239,66397,67425,69918,70618,73040,75056,75475,
#Partially deleted in new
chr6	63636480	63686324	chr6:63636480-63686324	1	+	63646551	63685933	789624	4	342,269,162,2196,	0,10046,43519,47648,
#Partially deleted in new
chr6	63646525	63714509	chr6:63646525-63714509	1	+	63646551	63713708	0	15	270,162,1783,307,184,145,157,117,132,136,196,148,90,196,2924,	0,33474,37603,45211,48055,51697,51923,53824,55982,57010,59503,60203,62625,64641,65060,
#Partially deleted in new
chr6	63679684	63684245	chr6:63679684-63684245	0	+	63679857	63684245	789624	3	207,162,117,	0,315,4444,
#Partially deleted in new
chr6	63702292	63706154	chr6:63702292-63706154	0	+	63702292	63702292	8553170	4	135,132,136,126,	0,215,1243,3736,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	63706799	63779208	chr6:63706799-63779208	0	+	63706799	63778211	789624	5	77,90,196,178,71,	0,2351,4367,71266,72338,
#Boundary problem: need 43, got 0, diff 43, mapped 0.0
chr6	63719979	65707225	chr6:63719979-65707225	3	-	63720595	65495410	789624	43	1818,162,173,175,145,167,183,173,221,109,154,147,233,113,151,92,191,1767,193,116,125,200,79,172,146,108,97,260,122,122,114,257,167,140,160,115,128,194,114,945,135,115,91,	0,6539,42481,58026,68125,69078,86210,144206,264403,279095,346358,361876,510612,586990,668710,716194,719182,870243,873137,897438,906141,1093398,1101665,1102671,1166717,1182133,1182424,1192504,1225813,1277602,1337634,1575883,1615000,1624058,1633478,1664406,1682498,1685194,1770614,1774683,1775879,1919798,1987155,
#Partially deleted in new
chr6	63720135	65707214	chr6:63720135-65707214	1	-	63720595	65495410	789624	44	1662,162,63,173,175,145,167,183,173,221,109,154,147,233,113,151,92,191,1767,193,116,125,200,79,172,146,108,97,260,122,122,114,257,167,140,160,115,128,194,114,945,135,115,80,	0,6383,21777,42325,57870,67969,68922,86054,144050,264247,278939,346202,361720,510456,586834,668554,716038,719026,870087,872981,897282,905985,1093242,1101509,1102515,1166561,1181977,1182268,1192348,1225657,1277446,1337478,1575727,1614844,1623902,1633322,1664250,1682342,1685038,1770458,1774527,1775723,1919642,1986999,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	63744110	64066376	chr6:63744110-64066376	0	-	63744985	64066376	789624	10	910,173,175,145,167,183,173,221,109,39,	0,18350,33895,43994,44947,62079,120075,240272,254964,322227,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	63777604	63779336	chr6:63777604-63779336	0	+	63777604	63777604	8553170	2	639,199,	0,1533,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	63786002	63806240	chr6:63786002-63806240	0	-	63786002	63786002	8553170	6	199,51,105,145,167,51,	0,1116,1264,2102,3055,20187,
#Deleted in new
chr6	63797188	63798031	chr6:63797188-63798031	7	+	63797188	63797188	16724991	1	843,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	63806835	63822642	chr6:63806835-63822642	3	+	63806835	63806835	8553170	2	51,1403,	0,14404,
#Deleted in new
chr6	63857440	63857769	chr6:63857440-63857769	7	+	63857440	63857440	16724991	1	329,	0,
#Partially deleted in new
chr6	64377794	64412779	chr6:64377794-64412779	3	+	64377794	64377794	8553170	4	138,129,114,144,	0,1789,22521,34841,
#Partially deleted in new
chr6	64593130	64713335	chr6:64593130-64713335	0	-	64593130	64593130	8553170	4	179,116,125,64,	0,24287,32990,120141,
#Partially deleted in new
chr6	64631204	64631682	chr6:64631204-64631682	7	-	64631204	64631204	16724991	1	478,	0,
#Partially deleted in new
chr6	64730812	64733545	chr6:64730812-64733545	4	-	64730812	64730812	16724991	2	180,173,	0,2560,
#Partially deleted in new
chr6	64733198	64733837	chr6:64733198-64733837	5	-	64733198	64733198	16724991	1	639,	0,
#Partially deleted in new
chr6	65295756	65303011	chr6:65295756-65303011	0	-	65295756	65295756	8553170	2	363,204,	0,7051,
#Partially deleted in new
chr6	65295824	65302937	chr6:65295824-65302937	0	-	65295824	65295824	8553170	3	295,92,130,	0,5022,6983,
#Deleted in new
chr6	65302521	65304957	chr6:65302521-65304957	7	+	65302521	65302521	16724991	1	2436,	0,
#Partially deleted in new
chr6	65329271	65707225	chr6:65329271-65707225	1	-	65332323	65495410	789624	12	3146,167,140,160,115,128,194,114,945,135,115,91,	0,5708,14766,24186,55114,73206,75902,161322,165391,166587,310506,377863,
#Partially deleted in new
chr6	65334909	65495993	chr6:65334909-65495993	1	-	65334960	65495410	789624	9	237,140,160,115,128,194,114,945,135,	0,9128,18548,49476,67568,70264,155684,159753,160949,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	65489360	65707214	chr6:65489360-65707214	0	-	65489360	65489360	8553170	5	1347,945,135,115,80,	0,5302,6498,150417,217774,
#Partially deleted in new
chr6	65490659	65495998	chr6:65490659-65495998	0	-	65491569	65495101	789624	5	48,233,701,131,140,	0,697,4003,4817,5199,
#Deleted in new
chr6	65788416	65789287	chr6:65788416-65789287	7	+	65788416	65788416	16724991	1	871,	0,
#Deleted in new
chr6	65836929	65838039	chr6:65836929-65838039	7	-	65836929	65836929	16724991	1	1110,	0,
#Deleted in new
chr6	66093430	66094909	chr6:66093430-66094909	7	-	66093430	66093430	16724991	1	1479,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	66710241	66710827	chr6:66710241-66710827	7	-	66710241	66710241	16724991	1	586,	0,
#Partially deleted in new
chr6	66728842	66728904	chr6:66728842-66728904	3	-	66728842	66728842	8553170	1	62,	0,
#Deleted in new
chr6	67210407	67210480	chr6:67210407-67210480	3	-	67210407	67210407	8553170	1	73,	0,
#Deleted in new
chr6	67456345	67457250	chr6:67456345-67457250	7	-	67456345	67456345	16724991	1	905,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	67467230	67467308	chr6:67467230-67467308	7	-	67467230	67467230	16724991	1	78,	0,
#Partially deleted in new
chr6	67546650	67546754	chr6:67546650-67546754	3	+	67546650	67546650	8553170	1	104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	67625355	67625464	chr6:67625355-67625464	3	+	67625355	67625355	8553170	1	109,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	67887645	67889339	chr6:67887645-67889339	3	-	67887645	67887645	8553170	2	1176,429,	0,1265,
#Deleted in new
chr6	67933484	67934682	chr6:67933484-67934682	7	+	67933484	67933484	16724991	1	1198,	0,
#Partially deleted in new
chr6	68055350	68060502	chr6:68055350-68060502	3	+	68055350	68055350	789624	2	85,407,	0,4745,
#Partially deleted in new
chr6	68598203	68598393	chr6:68598203-68598393	7	-	68598203	68598203	16724991	1	190,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	68628116	68635161	chr6:68628116-68635161	0	-	68628116	68628116	8553170	4	868,196,4153,96,	0,2153,2455,6949,
#Deleted in new
chr6	68629961	68634962	chr6:68629961-68634962	0	-	68629961	68629961	8553170	3	504,79,129,	0,610,4872,
#Deleted in new
chr6	68632662	68634324	chr6:68632662-68634324	0	-	68632662	68632662	789624	2	394,140,	0,1522,
#Deleted in new
chr6	68632662	68635027	chr6:68632662-68635027	3	-	68632662	68632662	8553170	1	2365,	0,
#Partially deleted in new
chr6	68635366	69389511	chr6:68635366-69389511	3	+	68638675	69388891	0	32	634,172,772,111,162,165,165,165,102,107,195,69,109,150,76,103,44,127,104,103,151,70,67,86,99,172,96,40,644,36,105,809,	0,2024,3294,295192,301152,308463,320657,321278,339396,339867,358401,378671,383024,412818,413904,427567,440628,597923,599665,603757,689505,692453,695139,697556,703549,703966,718866,720454,725502,737039,747464,753336,
#Partially deleted in new
chr6	68638675	69388891	chr6:68638675-69388891	1	+	68638675	69388891	0	30	757,111,162,165,165,165,102,107,195,69,109,150,76,103,44,127,104,103,151,70,67,86,99,172,96,40,644,36,105,189,	0,291883,297843,305154,317348,317969,336087,336558,355092,375362,379715,409509,410595,424258,437319,594614,596356,600448,686196,689144,691830,694247,700240,700657,715557,717145,722193,733730,744155,750027,
#Partially deleted in new
chr6	69232405	69389505	chr6:69232405-69389505	1	+	69232531	69388891	789624	16	224,127,104,103,151,70,67,86,99,172,96,40,644,36,105,803,	0,884,2626,6718,92466,95414,98100,100517,106510,106927,121827,123415,128463,140000,150425,156297,
#Partially deleted in new
chr6	69233033	69324942	chr6:69233033-69324942	0	+	69233128	69324942	789624	5	127,127,104,103,71,	0,256,1998,6090,91838,
#Deleted in new
chr6	69233033	69239226	chr6:69233033-69239226	0	+	69235034	69239226	789624	3	383,104,103,	0,1998,6090,
#Partially deleted in new
chr6	69675792	69797157	chr6:69675792-69797157	1	-	69676157	69796881	789624	16	479,92,79,150,105,103,65,153,126,74,89,68,98,61,177,345,	0,657,21770,23250,24972,25650,26096,37852,43163,62149,65996,73548,76466,104701,114503,121020,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr6	69675805	69792144	chr6:69675805-69792144	0	-	69675805	69675805	8553170	15	466,92,79,150,105,103,65,153,126,74,89,68,98,61,1849,	0,644,21757,23237,24959,25637,26083,37839,43150,62136,65983,73535,76453,104688,114490,
#Partially deleted in new
chr6	69675805	69796992	chr6:69675805-69796992	1	-	69676157	69796881	8553170	16	466,92,79,150,105,103,65,153,126,74,89,68,98,61,177,180,	0,644,21757,23237,24959,25637,26083,37839,43150,62136,65983,73535,76453,104688,114490,121007,
#Partially deleted in new
chr6	69675806	69781010	chr6:69675806-69781010	0	-	69675806	69675806	8553170	15	465,92,79,150,105,103,65,153,126,74,89,68,98,61,113,	0,643,21756,23236,24958,25636,26082,37838,43149,62135,65982,73534,76452,104687,105091,
#Partially deleted in new
chr6	69675814	69796608	chr6:69675814-69796608	1	-	69676157	69790322	8553170	16	457,92,79,150,105,103,65,153,126,74,89,68,98,61,177,195,	0,635,21748,23228,24950,25628,26074,37830,43141,62127,65974,73526,76444,104679,114481,120599,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr6	69675819	69796896	chr6:69675819-69796896	0	-	69709120	69796881	8553170	17	452,92,79,150,105,103,65,382,153,126,74,89,68,98,61,177,84,	0,630,21743,23223,24945,25623,26069,33030,37825,43136,62122,65969,73521,76439,104674,114476,120993,
#Partially deleted in new
chr6	69675821	69796828	chr6:69675821-69796828	0	-	69744025	69790322	8553170	17	450,92,79,150,105,103,65,153,126,74,89,60,68,98,61,177,16,	0,628,21741,23221,24943,25621,26067,37823,43134,62120,65967,68166,73519,76437,104672,114474,120991,
#Partially deleted in new
chr6	69675822	69796585	chr6:69675822-69796585	1	-	69676157	69790322	789624	16	449,92,79,150,105,103,65,153,126,74,89,68,98,61,177,95,	0,627,21740,23220,24942,25620,26066,37822,43133,62119,65966,73518,76436,104671,114473,120668,
#Partially deleted in new
chr6	69675830	69796597	chr6:69675830-69796597	1	-	69676157	69790322	8553170	16	441,92,79,150,105,103,65,153,126,74,89,68,98,61,177,219,	0,619,21732,23212,24934,25612,26058,37814,43125,62111,65958,73510,76428,104663,114465,120548,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr6	69675839	69780834	chr6:69675839-69780834	0	-	69675839	69675839	8553170	16	432,92,79,150,105,103,65,382,153,126,74,89,68,98,61,55,	0,610,21723,23203,24925,25603,26049,33010,37805,43116,62102,65949,73501,76419,104654,104940,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr6	69675842	69866616	chr6:69675842-69866616	0	-	69675842	69675842	8553170	18	429,92,79,150,105,103,65,153,126,74,89,68,98,61,177,64,179,146,	0,607,21720,23200,24922,25600,26046,37802,43113,62099,65946,73498,76416,104651,114453,148646,160014,190628,
#Partially deleted in new
chr6	69675853	69867107	chr6:69675853-69867107	1	-	69676157	69790322	8553170	17	418,92,79,150,105,103,65,153,126,74,89,68,98,61,177,179,38,	0,596,21709,23189,24911,25589,26035,37791,43102,62088,65935,73487,76405,104640,114442,160003,191216,
#Partially deleted in new
chr6	69675859	69856263	chr6:69675859-69856263	0	-	69675859	69675859	8553170	17	412,92,79,150,105,103,65,153,126,74,89,68,98,61,177,179,78,	0,590,21703,23183,24905,25583,26029,37785,43096,62082,65929,73481,76399,104634,114436,159997,180326,
#Partially deleted in new
chr6	69675859	69796885	chr6:69675859-69796885	0	-	69741860	69796881	8553170	14	412,92,79,150,38,103,65,153,126,74,89,61,177,73,	0,590,21703,23183,24905,25583,26029,37785,43096,62082,65929,104634,114436,120953,
#Partially deleted in new
chr6	69675898	69796891	chr6:69675898-69796891	0	-	69705580	69796881	789624	17	373,92,79,150,105,103,65,119,153,126,74,89,68,98,61,177,79,	0,551,21664,23144,24866,25544,25990,29602,37746,43057,62043,65890,73442,76360,104595,114397,120914,
#Partially deleted in new
chr6	69675898	69796933	chr6:69675898-69796933	0	-	69743829	69796881	8553170	17	373,92,79,150,105,103,65,153,126,74,89,98,68,98,61,177,121,	0,551,21664,23144,24866,25544,25990,37746,43057,62043,65890,67885,73442,76360,104595,114397,120914,
#Partially deleted in new
chr6	69675898	69796906	chr6:69675898-69796906	1	-	69676157	69796881	8553170	17	373,92,79,150,105,103,65,153,126,74,89,66,68,98,61,177,94,	0,551,21664,23144,24866,25544,25990,37746,43057,62043,65890,72325,73442,76360,104595,114397,120914,
#Partially deleted in new
chr6	69675925	69796906	chr6:69675925-69796906	0	-	69741847	69796881	8553170	15	346,92,79,150,105,103,65,153,126,74,89,98,61,177,94,	0,524,21637,23117,24839,25517,25963,37719,43030,62016,65863,76333,104568,114370,120887,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr6	69675930	69866663	chr6:69675930-69866663	3	-	69676157	69790322	8553170	17	341,92,79,150,105,103,65,153,126,74,89,68,98,61,177,64,193,	0,519,21632,23112,24834,25512,25958,37714,43025,62011,65858,73410,76328,104563,114365,148558,190540,
#Partially deleted in new
chr6	69675945	69796895	chr6:69675945-69796895	0	-	69744046	69796881	8553170	19	326,92,79,150,105,103,65,153,126,74,89,98,60,66,68,98,61,177,83,	0,504,21617,23097,24819,25497,25943,37699,43010,61996,65843,67838,68042,72278,73395,76313,104548,114350,120867,
#Partially deleted in new
chr6	69675950	69867236	chr6:69675950-69867236	1	-	69676157	69790322	8553170	17	321,92,79,150,105,103,65,153,126,74,89,68,98,61,177,175,29,	0,499,21612,23092,24814,25492,25938,37694,43005,61991,65838,73390,76308,104543,114345,159906,191257,
#Partially deleted in new
chr6	69675950	69867236	chr6:69675950-69867236	1	-	69676157	69790322	8553170	17	321,92,79,150,105,103,65,153,126,74,89,68,98,61,177,175,29,	0,499,21612,23092,24814,25492,25938,37694,43005,61991,65838,73390,76308,104543,114345,159906,191257,
#Partially deleted in new
chr6	69675959	69866693	chr6:69675959-69866693	1	-	69676157	69790322	8553170	16	312,92,79,150,105,103,65,153,126,74,89,68,98,61,177,223,	0,490,21603,23083,24805,25483,25929,37685,42996,61982,65829,73381,76299,104534,114336,190511,
#Partially deleted in new
chr6	69675972	69796608	chr6:69675972-69796608	1	-	69676157	69790322	8553170	16	299,92,79,150,105,103,65,153,126,74,89,68,98,61,177,195,	0,477,21590,23070,24792,25470,25916,37672,42983,61969,65816,73368,76286,104521,114323,120441,
#Partially deleted in new
chr6	69675973	69749408	chr6:69675973-69749408	0	-	69744025	69749408	8553170	14	298,92,79,150,105,103,65,153,126,74,89,98,60,68,	0,476,21589,23069,24791,25469,25915,37671,42982,61968,65815,67810,68014,73367,
#Partially deleted in new
chr6	69676051	69866616	chr6:69676051-69866616	1	-	69676157	69790322	8553170	17	220,92,79,150,105,103,65,153,126,74,89,68,98,61,177,175,146,	0,398,21511,22991,24713,25391,25837,37593,42904,61890,65737,73289,76207,104442,114244,122063,190419,
#Partially deleted in new
chr6	69676089	69790472	chr6:69676089-69790472	0	-	69701925	69790322	8553170	16	182,92,79,150,105,103,65,20,153,126,74,89,68,98,61,177,	0,360,21473,22953,24675,25353,25799,34335,37555,42866,61852,65699,73251,76169,104404,114206,
#Partially deleted in new
chr6	69676107	69796341	chr6:69676107-69796341	0	-	69676107	69676107	8553170	16	164,92,79,150,105,103,65,153,126,74,89,68,98,61,177,48,	0,342,21455,22935,24657,25335,25781,37537,42848,61834,65681,73233,76151,104386,114188,120186,
#Partially deleted in new
chr6	69700839	69796920	chr6:69700839-69796920	0	-	69749400	69796881	8553170	11	30,103,65,153,126,74,89,68,61,177,108,	0,603,1049,12805,18116,37102,40949,48501,79654,89456,95973,
#Deleted in new
chr6	69705286	69706160	chr6:69705286-69706160	7	-	69705286	69705286	16724991	1	874,	0,
#Deleted in new
chr6	69745870	69746851	chr6:69745870-69746851	7	+	69745870	69745870	16724991	1	981,	0,
#Partially deleted in new
chr6	69749403	69796608	chr6:69749403-69796608	0	-	69749403	69790322	8553170	6	5,98,61,177,76,195,	0,2855,31090,40892,46750,47010,
#Duplicated in new
chr6	69790324	69835623	chr6:69790324-69835623	0	-	69790324	69790324	8553170	5	148,92,97,175,74,	0,6488,7055,7790,45225,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	69790361	69796515	chr6:69790361-69796515	0	-	69790361	69790361	8553170	2	111,1846,	0,4308,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	69793736	69796587	chr6:69793736-69796587	0	-	69793736	69793736	8553170	1	2851,	0,
#Partially deleted in new
chr6	69866570	70209976	chr6:69866570-70209976	3	+	69879567	70207274	789624	51	70,123,75,100,124,276,81,126,63,45,45,54,54,36,54,54,63,42,63,36,36,54,54,54,90,45,78,36,54,54,42,105,54,54,54,54,45,51,45,27,54,45,45,63,36,45,171,67,129,78,2830,	0,12965,32377,33668,61338,62854,66212,70214,71467,93425,96255,157056,167674,169333,201852,235598,255309,263611,271114,274383,275322,275452,276196,277639,278347,280088,280241,283133,283280,283421,284826,289556,289745,290099,295329,296772,299370,301454,301600,302084,305393,309949,313741,313890,318132,318300,321504,323744,333037,340330,340576,
#Partially deleted in new
chr6	69867415	69879902	chr6:69867415-69879902	1	+	69879567	69879750	789624	2	222,367,	0,12120,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	69867548	69891220	chr6:69867548-69891220	0	+	69867548	69867548	8553170	3	89,123,1303,	0,11987,22369,
#Partially deleted in new
chr6	69936871	69974196	chr6:69936871-69974196	0	+	69936871	69936871	8553170	5	39,63,45,45,358,	0,1166,23124,25954,36967,
#Deleted in new
chr6	70098389	70098676	chr6:70098389-70098676	7	-	70098389	70098389	16724991	1	287,	0,
#Partially deleted in new
chr6	70121879	70131203	chr6:70121879-70131203	0	+	70121879	70131058	789624	3	63,42,151,	0,8302,9173,
#Partially deleted in new
chr6	70215060	70303083	chr6:70215060-70303083	3	-	70216896	70302924	0	38	2021,78,189,55,147,33,45,36,72,54,54,54,45,54,54,54,54,54,54,54,54,57,33,54,54,24,36,54,63,36,75,21,84,397,133,78,74,173,	0,10871,17522,19478,19733,24193,25628,26358,26903,27601,37059,37201,38324,39415,39902,40089,40276,41707,45596,48183,51656,53743,54572,55253,56594,57004,58986,59658,65751,65943,66329,67837,68676,79106,84982,85248,86940,87850,
#Partially deleted in new
chr6	70216039	70283209	chr6:70216039-70283209	1	-	70216896	70283052	0	32	1042,78,189,55,147,33,45,36,72,54,54,54,45,54,54,54,54,54,54,54,54,57,33,54,54,24,36,54,63,36,75,229,	0,9892,16543,18499,18754,23214,24649,25379,25924,26622,36080,36222,37345,38436,38923,39110,39297,40728,44617,47204,50677,52764,53593,54274,55615,56025,58007,58679,64772,64964,65350,66941,
#Partially deleted in new
chr6	70216256	70258682	chr6:70216256-70258682	0	-	70216256	70216256	8553170	19	825,78,189,55,147,33,45,36,72,54,54,54,45,54,54,54,54,54,135,	0,9675,16326,18282,18537,22997,24432,25162,25707,26405,35863,36005,37128,38219,38706,38893,39080,40511,42291,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	70216523	70246303	chr6:70216523-70246303	0	-	70216523	70216523	8553170	10	558,78,189,55,147,33,45,36,54,649,	0,9408,16059,18015,18270,22730,24165,24895,26138,29131,
#Partially deleted in new
chr6	70216742	70280477	chr6:70216742-70280477	0	-	70216742	70216742	8553170	27	339,78,189,55,147,33,45,36,54,54,54,45,54,54,54,54,54,54,54,54,57,33,54,24,36,54,121,	0,9189,15840,17796,18051,22511,23946,24676,25919,35377,35519,36642,37733,38220,38407,38594,40025,43914,46501,49974,52061,52890,54912,55322,57304,57976,63614,
#Partially deleted in new
chr6	70222757	70242156	chr6:70222757-70242156	3	+	70222757	70222757	8553170	2	81,173,	0,19226,
#Partially deleted in new
chr6	70234559	70254758	chr6:70234559-70254758	0	-	70234559	70234559	8553170	13	34,147,33,45,36,72,54,54,54,43,45,54,19,	0,234,4694,6129,6859,7404,8102,17560,17702,18698,18825,19916,20180,
#Partially deleted in new
chr6	70234908	70261078	chr6:70234908-70261078	0	-	70234908	70234908	8553170	15	32,33,45,36,72,54,54,54,45,54,54,54,54,54,422,	0,4345,5780,6510,7055,7753,17211,17353,18476,19567,20054,20241,20428,21859,25748,
#Deleted in new
chr6	70252165	70254611	chr6:70252165-70254611	0	-	70252165	70252165	8553170	4	8,54,45,136,	0,96,1219,2310,
#Partially deleted in new
chr6	70274011	70275178	chr6:70274011-70275178	0	-	70274011	70274011	8553170	2	71,460,	0,707,
#Partially deleted in new
chr6	70279761	70303070	chr6:70279761-70303070	1	-	70280000	70302924	0	11	251,63,36,75,21,84,397,133,78,74,160,	0,1050,1242,1628,3136,3975,14405,20281,20547,22239,23149,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	70394886	70399417	chr6:70394886-70399417	3	+	70394886	70394886	8553170	3	157,37,203,	0,343,4328,
#Deleted in new
chr6	70412827	70413950	chr6:70412827-70413950	3	-	70412827	70412827	789624	2	235,114,	0,1009,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	70412940	70428344	chr6:70412940-70428344	0	+	70412940	70412940	8553170	5	150,57,86,195,41,	0,705,2350,13629,15363,
#Partially deleted in new
chr6	70413307	70561174	chr6:70413307-70561174	1	+	70428342	70559921	789624	22	395,86,94,116,80,140,71,174,127,154,50,156,74,155,2356,161,92,98,152,111,114,1459,	0,1983,13131,14996,39184,62102,62355,63851,67593,68693,77726,89328,109205,110659,111035,114984,119852,120449,122952,124983,143442,146408,
#Partially deleted in new
chr6	70413420	70561032	chr6:70413420-70561032	1	+	70428342	70559921	789624	22	282,86,116,80,140,71,174,127,154,50,156,74,155,261,835,161,92,98,152,111,114,1317,	0,1870,14883,39071,61989,62242,63738,67480,68580,77613,89215,109092,110546,111510,112443,114871,119739,120336,122839,124870,143329,146295,
#Partially deleted in new
chr6	70413424	70524599	chr6:70413424-70524599	0	+	70428342	70524599	789624	14	278,94,116,80,140,71,174,127,154,50,156,74,155,257,	0,13014,14879,39067,61985,62238,63734,67476,68576,77609,89211,109088,110542,110918,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	70413514	70452507	chr6:70413514-70452507	0	+	70428342	70452507	789624	5	188,86,140,116,16,	0,1776,13055,14789,38977,
#Partially deleted in new
chr6	70413565	70561024	chr6:70413565-70561024	1	+	70428342	70559921	789624	21	137,94,116,91,71,174,127,154,78,50,156,74,155,1768,161,92,98,152,111,114,1309,	0,12873,14738,61893,62097,63593,67335,68435,72601,77468,89070,108947,110401,111365,114726,119594,120191,122694,124725,143184,146150,
#Partially deleted in new
chr6	70413577	70560659	chr6:70413577-70560659	3	+	70428342	70559921	789624	22	125,86,94,116,80,140,71,174,127,154,50,156,74,155,1768,161,92,98,152,111,114,944,	0,1713,12861,14726,38914,61832,62085,63581,67323,68423,77456,89058,108935,110389,111353,114714,119582,120179,122682,124713,143172,146138,
#Partially deleted in new
chr6	70426438	70561170	chr6:70426438-70561170	1	+	70428342	70559921	789624	20	94,116,80,140,71,174,127,154,50,156,74,155,2356,161,92,98,152,111,114,1455,	0,1865,26053,48971,49224,50720,54462,55562,64595,76197,96074,97528,97904,101853,106721,107318,109821,111852,130311,133277,
#Partially deleted in new
chr6	70426527	70561171	chr6:70426527-70561171	0	+	70428342	70480936	789624	21	5,116,80,140,71,40,127,154,78,50,156,74,155,1768,161,92,98,152,111,114,1456,	0,1776,25964,48882,49135,50765,54373,55473,59639,64506,76108,95985,97439,98403,101764,106632,107229,109732,111763,130222,133188,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr6	70428342	70557694	chr6:70428342-70557694	1	+	70428342	70556931	789624	18	77,80,140,71,174,127,154,50,156,74,155,2356,161,92,98,152,111,945,	0,24149,47067,47320,48816,52558,53658,62691,74293,94170,95624,96000,99949,104817,105414,107917,109948,128407,
#Partially deleted in new
chr6	70428385	70524608	chr6:70428385-70524608	0	+	70428385	70428385	8553170	12	34,80,140,71,174,127,154,78,50,156,74,642,	0,24106,47024,47277,48773,52515,53615,57781,62648,74250,94127,95581,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	70482132	70504960	chr6:70482132-70504960	0	+	70482132	70482132	8553170	4	22,78,50,2325,	0,4034,8901,20503,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	70513293	70513356	chr6:70513293-70513356	3	+	70513293	70513293	8553170	1	63,	0,
#Partially deleted in new
chr6	70535906	70538346	chr6:70535906-70538346	0	+	70535906	70535906	8553170	2	505,56,	0,2384,
#Partially deleted in new
chr6	70556697	70561171	chr6:70556697-70561171	0	+	70556697	70556697	8553170	2	166,1456,	0,3018,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	70566916	70589569	chr6:70566916-70589569	3	+	70566940	70588724	789624	3	88,153,955,	0,12497,21698,
#Partially deleted in new
chr6	70566916	70567659	chr6:70566916-70567659	0	+	70566916	70566916	8553170	2	88,244,	0,499,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	70596437	70596980	chr6:70596437-70596980	3	+	70596437	70596437	8553170	1	543,	0,
#Partially deleted in new
chr6	70608233	70609334	chr6:70608233-70609334	7	-	70608233	70608233	16724991	1	1101,	0,
#Deleted in new
chr6	70663501	70664279	chr6:70663501-70664279	7	-	70663501	70663501	16724991	1	778,	0,
#Partially deleted in new
chr6	70667775	70861166	chr6:70667775-70861166	3	+	70668023	70860334	0	10	366,134,86,76,81,88,125,172,308,967,	0,64602,87204,105574,130881,169165,184764,189083,190146,192424,
#Partially deleted in new
chr6	70667775	70861166	chr6:70667775-70861166	1	+	70668023	70860234	0	11	366,134,86,76,81,88,125,172,308,88,967,	0,64602,87204,105574,130881,169165,184764,189083,190146,191553,192424,
#Partially deleted in new
chr6	70667775	70862015	chr6:70667775-70862015	1	+	70668023	70860334	0	11	366,134,86,76,81,81,88,125,172,308,1816,	0,64602,87204,105574,123913,130881,169165,184764,189083,190146,192424,
#Partially deleted in new
chr6	70668529	70862011	chr6:70668529-70862011	1	+	70668628	70860334	789624	11	187,134,86,76,81,81,88,125,172,308,1812,	0,63848,86450,104820,123159,130127,168411,184010,188329,189392,191670,
#Deleted in new
chr6	70693838	70694619	chr6:70693838-70694619	7	+	70693838	70693838	16724991	1	781,	0,
#Deleted in new
chr6	70734502	70734962	chr6:70734502-70734962	7	+	70734502	70734502	16724991	1	460,	0,
#Partially deleted in new
chr6	70772928	70791769	chr6:70772928-70791769	0	+	70773320	70791769	789624	2	497,81,	0,18760,
#Partially deleted in new
chr6	70773388	70837912	chr6:70773388-70837912	0	+	70773388	70837869	789624	5	37,81,81,88,132,	0,18300,25268,63552,64392,
#Partially deleted in new
chr6	70856678	70957038	chr6:70856678-70957038	3	-	70861662	70956429	0	4	5071,149,145,1200,	0,5151,37449,99160,
#Partially deleted in new
chr6	70857212	70956429	chr6:70857212-70956429	1	-	70861662	70956429	789624	4	4537,149,145,375,	0,4617,36915,98842,
#Partially deleted in new
chr6	71075563	71076375	chr6:71075563-71076375	7	+	71075563	71075563	16724991	1	812,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	71126892	71127105	chr6:71126892-71127105	3	-	71126892	71126892	8553170	1	213,	0,
#Deleted in new
chr6	71165075	71165770	chr6:71165075-71165770	7	+	71165075	71165075	16724991	1	695,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	71182611	71182718	chr6:71182611-71182718	3	+	71182611	71182611	8553170	1	107,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	71221456	71284932	chr6:71221456-71284932	1	-	71221456	71221456	8553170	5	98,70,102,145,73,	0,1189,8369,12056,63403,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	71229825	71238598	chr6:71229825-71238598	1	-	71229825	71229825	8553170	3	102,145,146,	0,3687,8627,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	71251357	71310576	chr6:71251357-71310576	1	-	71251357	71251357	8553170	4	264,96,78,27,	0,25861,58938,59192,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	71251363	71310340	chr6:71251363-71310340	1	-	71251363	71251363	8553170	3	281,81,45,	0,33496,58932,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	71251561	71328063	chr6:71251561-71328063	0	-	71251561	71251561	8553170	8	83,96,111,81,76,78,93,86,	0,25657,32212,33298,51408,58734,58988,76416,
#Deleted in new
chr6	71251757	71252988	chr6:71251757-71252988	7	+	71251757	71251757	16724991	1	1231,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	71253683	71328063	chr6:71253683-71328063	0	-	71253683	71253683	8553170	4	520,111,81,86,	0,30090,31176,74294,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	71277218	71328063	chr6:71277218-71328063	0	-	71277218	71277218	8553170	7	96,111,210,76,78,93,86,	0,6555,7641,25751,33077,33331,50759,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	71281384	71328063	chr6:71281384-71328063	0	-	71281384	71281384	8553170	6	317,111,81,78,93,86,	0,2389,3475,28911,29165,46593,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	71288802	71308950	chr6:71288802-71308950	3	+	71288936	71302049	789624	7	368,87,79,79,67,146,7565,	0,4490,4730,7514,7692,7869,12583,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	71291317	71308919	chr6:71291317-71308919	1	+	71296722	71302049	8553170	7	21,87,82,79,67,146,7534,	0,1975,2212,4999,5177,5354,10068,
#Deleted in new
chr6	71291361	71293612	chr6:71291361-71293612	0	+	71291361	71291361	8553170	3	659,87,80,	0,1931,2171,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	71295172	71310595	chr6:71295172-71310595	1	-	71295172	71295172	8553170	5	175,76,43,78,46,	0,7797,9175,15123,15377,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	71295172	71417436	chr6:71295172-71417436	3	-	71295172	71295172	8553170	7	175,76,43,78,93,150,117,	0,7797,9175,15123,15377,121237,122147,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	71295175	71328063	chr6:71295175-71328063	0	-	71295175	71295175	8553170	7	172,103,76,43,78,93,86,	0,535,7794,9172,15120,15374,32802,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	71295544	71328063	chr6:71295544-71328063	2	-	71295544	71295544	8553170	6	269,76,43,78,93,86,	0,7425,8803,14751,15005,32433,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	71302841	71328084	chr6:71302841-71328084	1	-	71302841	71302841	8553170	5	204,43,78,93,107,	0,1506,7454,7708,25136,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	71302965	71328063	chr6:71302965-71328063	0	-	71302965	71302965	8553170	6	80,78,93,93,320,86,	0,7330,7584,10088,10879,25012,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	71302969	71328063	chr6:71302969-71328063	0	-	71302969	71302969	8553170	6	76,43,78,93,93,86,	0,1378,7326,7580,10084,25008,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	71302977	71328059	chr6:71302977-71328059	0	-	71302977	71302977	8553170	6	68,43,78,93,291,82,	0,1370,7318,7572,23352,25000,
#Partially deleted in new
chr6	71303896	71328057	chr6:71303896-71328057	0	-	71303896	71303896	8553170	4	494,78,93,80,	0,6399,6653,24081,
#Partially deleted in new
chr6	71307940	71328084	chr6:71307940-71328084	1	-	71307940	71307940	8553170	4	251,78,93,107,	0,2355,2609,20037,
#Partially deleted in new
chr6	71307940	71328063	chr6:71307940-71328063	0	-	71307940	71307940	8553170	6	251,78,93,93,79,86,	0,2355,2609,5113,6766,20037,
#Partially deleted in new
chr6	71307944	71328058	chr6:71307944-71328058	0	-	71307944	71307944	8553170	5	247,78,93,79,81,	0,2351,2605,6762,20033,
#Partially deleted in new
chr6	71307980	71328053	chr6:71307980-71328053	0	-	71307980	71307980	8553170	3	211,347,76,	0,2315,19997,
#Partially deleted in new
chr6	71308001	71328217	chr6:71308001-71328217	0	-	71308001	71308001	8553170	5	190,78,93,345,240,	0,2294,2548,5843,19976,
#Partially deleted in new
chr6	71308125	71328228	chr6:71308125-71328228	1	-	71308125	71308125	8553170	5	66,78,93,320,251,	0,2170,2424,5719,19852,
#Partially deleted in new
chr6	71310295	71328063	chr6:71310295-71328063	0	-	71310295	71310295	8553170	5	78,93,320,79,86,	0,254,3549,4411,17682,
#Deleted in new
chr6	71328941	71329806	chr6:71328941-71329806	3	+	71328941	71328941	8553170	2	54,298,	0,567,
#Partially deleted in new
chr6	71344343	71420103	chr6:71344343-71420103	0	-	71344343	71344343	8553170	4	350,150,124,38,	0,72066,72976,75722,
#Partially deleted in new
chr6	71344585	71420266	chr6:71344585-71420266	3	-	71344585	71344585	8553170	5	108,84,150,124,201,	0,3941,71824,72734,75480,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	71373252	71375387	chr6:71373252-71375387	3	-	71373252	71373252	8553170	1	2135,	0,
#Deleted in new
chr6	71376959	71377031	chr6:71376959-71377031	3	-	71376959	71376959	5263520	1	72,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	71386851	71390829	chr6:71386851-71390829	3	-	71386851	71386851	8553170	1	3978,	0,
#Deleted in new
chr6	71403550	71403621	chr6:71403550-71403621	3	-	71403550	71403550	789624	1	71,	0,
#Partially deleted in new
chr6	71414444	71420769	chr6:71414444-71420769	1	-	71414444	71414444	789624	4	2115,73,66,704,	0,2875,4244,5621,
#Partially deleted in new
chr6	71416162	71420261	chr6:71416162-71420261	0	-	71416162	71416162	8553170	3	397,124,196,	0,1157,3903,
#Partially deleted in new
chr6	71416383	71420267	chr6:71416383-71420267	0	-	71416383	71416383	8553170	3	176,73,202,	0,936,3682,
#Partially deleted in new
chr6	71416476	71420267	chr6:71416476-71420267	0	-	71416476	71416476	8553170	4	83,124,66,202,	0,843,2212,3589,
#Partially deleted in new
chr6	71450833	71458874	chr6:71450833-71458874	3	+	71450833	71450833	8553170	4	73,91,193,95,	0,2170,7645,7946,
#Partially deleted in new
chr6	71532069	71534715	chr6:71532069-71534715	3	+	71532069	71532069	8553170	2	181,1778,	0,868,
#Deleted in new
chr6	71550957	71551643	chr6:71550957-71551643	7	-	71550957	71550957	16724991	1	686,	0,
#Deleted in new
chr6	71584720	71585906	chr6:71584720-71585906	7	+	71584720	71584720	16724991	1	1186,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr6	71886702	72264004	chr6:71886702-72264004	0	+	71886702	71886702	8553170	19	485,81,214,12,341,866,68,111,100,124,47,113,131,172,154,72,157,126,3300,	0,82280,210246,213272,292872,295581,347070,348915,351120,355611,359112,361312,363627,364218,364512,366058,371422,372283,374002,
#Partially deleted in new
chr6	71886702	72400994	chr6:71886702-72400994	1	+	71887023	72400714	0	28	485,81,214,12,341,866,68,111,100,124,47,113,131,172,154,72,157,126,63,90,113,113,167,236,139,113,140,499,	0,82280,210246,213272,292872,295581,347070,348915,351120,355611,359112,361312,363627,364218,364512,366058,371422,372283,374002,379257,405231,420555,426803,446897,503895,505995,512252,513793,
#Partially deleted in new
chr6	71887023	72403143	chr6:71887023-72403143	1	+	71887023	72400714	0	30	164,81,214,12,341,866,68,111,100,124,47,113,131,172,154,72,157,126,63,78,90,113,113,167,236,139,113,102,140,2648,	0,81959,209925,212951,292551,295260,346749,348594,350799,355290,358791,360991,363306,363897,364191,365737,371101,371962,373681,377951,378936,404910,420234,426482,446576,503574,505674,511225,511931,513472,
#Partially deleted in new
chr6	71887023	72400714	chr6:71887023-72400714	1	+	71887023	72400714	0	28	164,81,214,12,341,866,68,111,100,124,47,113,131,172,154,72,154,126,63,113,113,167,209,139,113,102,140,219,	0,81959,209925,212951,292551,295260,346749,348594,350799,355290,358791,360991,363306,363897,364191,365737,371104,371962,373681,404910,420234,426482,446603,503574,505674,511225,511931,513472,
#Partially deleted in new
chr6	71887023	72400714	chr6:71887023-72400714	1	+	71887023	72400714	0	27	164,81,214,12,341,866,68,111,100,124,47,113,131,172,154,72,157,126,63,90,84,113,139,113,102,140,219,	0,81959,209925,212951,292551,295260,346749,348594,350799,355290,358791,360991,363306,363897,364191,365737,371101,371962,373681,378936,387325,404910,503574,505674,511225,511931,513472,
#Partially deleted in new
chr6	71887023	72401127	chr6:71887023-72401127	1	+	71887023	72400714	0	26	164,81,214,12,341,866,68,111,100,124,47,113,131,172,154,72,154,126,63,90,113,139,113,102,140,632,	0,81959,209925,212951,292551,295260,346749,348594,350799,355290,358791,360991,363306,363897,364191,365737,371104,371962,373681,378936,404910,503574,505674,511225,511931,513472,
#Partially deleted in new
chr6	71887023	72400714	chr6:71887023-72400714	3	+	71887023	72400714	0	34	164,81,214,12,341,866,68,111,100,124,47,113,131,172,154,72,157,126,63,78,114,90,84,72,183,113,113,167,236,139,113,102,140,219,	0,81959,209925,212951,292551,295260,346749,348594,350799,355290,358791,360991,363306,363897,364191,365737,371101,371962,373681,377951,378366,378936,387325,397023,403655,404910,420234,426482,446576,503574,505674,511225,511931,513472,
#Partially deleted in new
chr6	71887023	72400714	chr6:71887023-72400714	1	+	71887023	72400714	0	24	164,81,214,12,341,866,68,111,100,124,47,113,131,172,154,72,154,126,113,139,113,102,140,219,	0,81959,209925,212951,292551,295260,346749,348594,350799,355290,358791,360991,363306,363897,364191,365737,371104,371962,404910,503574,505674,511225,511931,513472,
#Partially deleted in new
chr6	72182751	72401088	chr6:72182751-72401088	0	+	72182751	72400714	789624	22	398,68,111,100,124,47,113,131,172,154,72,157,126,113,113,167,236,139,113,102,140,593,	0,51021,52866,55071,59562,63063,65263,67578,68169,68463,70009,75373,76234,109182,124506,130754,150848,207846,209946,215497,216203,217744,
#Partially deleted in new
chr6	72212810	72400905	chr6:72212810-72400905	1	+	72213122	72400714	0	25	412,68,111,100,124,47,113,131,172,154,72,154,126,63,90,72,113,113,167,236,139,113,102,140,410,	0,20962,22807,25012,29503,33004,35204,37519,38110,38404,39950,45317,46175,47894,53149,71236,79123,94447,100695,120789,177787,179887,185438,186144,187685,
#Partially deleted in new
chr6	72212892	72401127	chr6:72212892-72401127	1	+	72213122	72400714	0	21	330,68,111,100,124,47,113,131,172,154,72,157,126,63,90,113,139,113,102,140,632,	0,20880,22725,24930,29421,32922,35122,37437,38028,38322,39868,45232,46093,47812,53067,79041,177705,179805,185356,186062,187603,
#Partially deleted in new
chr6	72216441	72400890	chr6:72216441-72400890	1	+	72235692	72400714	0	22	197,68,111,100,124,47,113,131,172,154,72,157,126,63,90,72,113,139,113,102,140,395,	0,17331,19176,21381,25872,29373,31573,33888,34479,34773,36319,41683,42544,44263,49518,67605,75492,174156,176256,181807,182513,184054,
#Partially deleted in new
chr6	72216541	72398999	chr6:72216541-72398999	0	+	72235692	72398999	789624	21	97,68,111,100,124,47,113,131,172,154,72,157,126,113,113,167,236,139,113,102,45,	0,17231,19076,21281,25772,29273,31473,33788,34379,34673,36219,41583,42444,75392,90716,96964,117058,174056,176156,181707,182413,
#Partially deleted in new
chr6	72216759	72400869	chr6:72216759-72400869	1	+	72217188	72400714	0	22	484,68,111,100,124,47,113,131,172,154,72,157,126,63,90,72,113,139,113,102,140,374,	0,17013,18858,21063,25554,29055,31255,33570,34161,34455,36001,41365,42226,43945,49200,67287,75174,173838,175938,181489,182195,183736,
#Partially deleted in new
chr6	72216759	72266313	chr6:72216759-72266313	0	+	72216759	72216759	8553170	15	484,68,111,100,124,47,113,131,172,154,72,157,126,63,354,	0,17013,18858,21063,25554,29055,31255,33570,34161,34455,36001,41365,42226,43945,49200,
#Partially deleted in new
chr6	72250413	72400714	chr6:72250413-72400714	0	+	72250413	72400714	789624	17	47,172,154,72,157,126,63,90,113,113,167,236,139,113,102,140,219,	0,507,801,2347,7711,8572,10291,15546,41520,56844,63092,83186,140184,142284,147835,148541,150082,
#Partially deleted in new
chr6	72252790	72401167	chr6:72252790-72401167	0	+	72252790	72400714	789624	15	42,157,126,63,72,113,30,113,167,236,139,113,102,140,672,	0,5334,6195,7914,31256,39143,43146,54467,60715,80809,137807,139907,145458,146164,147705,
#Partially deleted in new
chr6	72260698	72401260	chr6:72260698-72401260	0	+	72260698	72260698	8553170	8	69,72,113,139,113,102,140,765,	0,23348,31235,129899,131999,137550,138256,139797,
#Deleted in new
chr6	72316598	72317436	chr6:72316598-72317436	7	-	72316598	72316598	16724991	1	838,	0,
#Partially deleted in new
chr6	72365773	72401651	chr6:72365773-72401651	0	+	72365773	72365773	8553170	6	43,288,113,102,140,1156,	0,24824,26924,32475,33181,34722,
#Partially deleted in new
chr6	72366729	72401651	chr6:72366729-72401651	1	+	72390650	72400714	0	6	137,139,113,102,140,1156,	0,23868,25968,31519,32225,33766,
#Deleted in new
chr6	72522640	72523238	chr6:72522640-72523238	7	+	72522640	72522640	16724991	1	598,	0,
#Partially deleted in new
chr6	72598450	72599634	chr6:72598450-72599634	7	-	72598450	72598450	16724991	1	1184,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	72614385	72622073	chr6:72614385-72622073	3	-	72614385	72614385	8553170	3	1688,156,2094,	0,3465,5594,
#Partially deleted in new
chr6	72621791	73198848	chr6:72621791-73198848	1	+	72622189	73195414	0	15	796,91,127,176,126,111,96,95,27,57,221,109,132,127,4397,	0,382116,420144,455530,455970,483465,489516,498691,502694,508001,511629,547954,568781,570773,572660,
#Partially deleted in new
chr6	72621842	73198834	chr6:72621842-73198834	1	+	72622189	73195414	789624	15	739,15,82,127,176,126,111,96,95,27,221,109,132,127,4383,	0,185016,382074,420093,455479,455919,483414,489465,498640,502643,511578,547903,568730,570722,572609,
#Partially deleted in new
chr6	72621842	73198834	chr6:72621842-73198834	3	+	72622189	73195414	789624	16	739,15,82,127,176,126,111,96,95,27,57,221,109,132,127,4383,	0,185016,382074,420093,455479,455919,483414,489465,498640,502643,507950,511578,547903,568730,570722,572609,
#Partially deleted in new
chr6	72621842	73198834	chr6:72621842-73198834	1	+	72622189	73195414	789624	15	739,15,82,127,176,126,111,96,95,57,221,109,132,127,4383,	0,185016,382074,420093,455479,455919,483414,489465,498640,507950,511578,547903,568730,570722,572609,
#Partially deleted in new
chr6	72621842	73198834	chr6:72621842-73198834	1	+	72622189	73195414	789624	14	739,15,82,127,176,126,111,96,95,221,109,132,127,4383,	0,185016,382074,420093,455479,455919,483414,489465,498640,511578,547903,568730,570722,572609,
#Partially deleted in new
chr6	72621842	73198834	chr6:72621842-73198834	1	+	72622189	73195414	789624	13	739,15,82,127,176,126,111,96,95,27,132,127,4383,	0,185016,382074,420093,455479,455919,483414,489465,498640,502643,568730,570722,572609,
#Partially deleted in new
chr6	72621842	73196125	chr6:72621842-73196125	1	+	72622189	73195414	0	12	745,91,127,176,126,111,96,95,27,132,127,1674,	0,382065,420093,455479,455919,483414,489465,498640,502643,568730,570722,572609,
#Partially deleted in new
chr6	72622080	73198851	chr6:72622080-73198851	1	+	72622189	73195414	0	14	507,91,127,176,126,111,96,95,27,221,109,132,127,4400,	0,381827,419855,455241,455681,483176,489227,498402,502405,511340,547665,568492,570484,572371,
#Partially deleted in new
chr6	72622105	73124650	chr6:72622105-73124650	1	+	72622189	73124549	0	9	482,91,127,176,126,111,96,95,165,	0,381802,419830,455216,455656,483151,489202,498377,502380,
#Partially deleted in new
chr6	72622171	73195454	chr6:72622171-73195454	1	+	72622189	73195414	0	13	416,91,127,176,126,111,96,95,221,109,132,127,1003,	0,381736,419764,455150,455590,483085,489136,498311,511249,547574,568401,570393,572280,
#Partially deleted in new
chr6	72630494	72678558	chr6:72630494-72678558	3	+	72630494	72630494	789624	4	97,141,120,205,	0,10239,46600,47859,
#Partially deleted in new
chr6	72967686	72967753	chr6:72967686-72967753	3	-	72967686	72967686	5263520	1	67,	0,
#Deleted in new
chr6	72986312	72987750	chr6:72986312-72987750	7	+	72986312	72986312	16724991	1	1438,	0,
#Partially deleted in new
chr6	73003995	73042187	chr6:73003995-73042187	0	+	73003995	73042139	789624	2	3,252,	0,37940,
#Partially deleted in new
chr6	73041935	73043261	chr6:73041935-73043261	0	+	73041935	73043213	789624	2	127,194,	0,1132,
#Partially deleted in new
chr6	73055096	73055857	chr6:73055096-73055857	7	+	73055096	73055096	16724991	1	761,	0,
#Partially deleted in new
chr6	73120556	73134327	chr6:73120556-73134327	0	+	73120556	73133970	789624	3	21,221,407,	0,12864,13364,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	73134802	73143514	chr6:73134802-73143514	3	-	73134802	73134802	5263520	5	225,66,593,128,89,	0,484,764,1830,8623,
#Deleted in new
chr6	73157516	73158139	chr6:73157516-73158139	7	-	73157516	73157516	16724991	1	623,	0,
#Deleted in new
chr6	73209082	73210080	chr6:73209082-73210080	7	-	73209082	73209082	16724991	3	200,183,125,	0,522,873,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	73209745	73263196	chr6:73209745-73263196	3	-	73224252	73242517	789624	8	335,121,141,183,125,183,125,423,	0,6773,13953,14420,15551,32309,32660,53028,
#Partially deleted in new
chr6	73223543	73225452	chr6:73223543-73225452	3	-	73223747	73225408	789624	3	296,183,156,	0,622,1753,
#Partially deleted in new
chr6	73224255	73225770	chr6:73224255-73225770	0	-	73224255	73224255	8553170	2	93,474,	0,1041,
#Partially deleted in new
chr6	73241313	73263184	chr6:73241313-73263184	1	-	73241528	73242517	789624	4	415,183,125,411,	0,741,1092,21460,
#Partially deleted in new
chr6	73241313	73310215	chr6:73241313-73310215	1	-	73241528	73309714	789624	5	415,183,125,43,664,	0,741,1092,50684,68238,
#Partially deleted in new
chr6	73241316	73242561	chr6:73241316-73242561	1	-	73241517	73242517	789624	4	207,86,183,156,	0,326,738,1089,
#Partially deleted in new
chr6	73241316	73263184	chr6:73241316-73263184	1	-	73241528	73242517	789624	5	412,183,125,292,89,	0,738,1089,21457,21779,
#Partially deleted in new
chr6	73242054	73263172	chr6:73242054-73263172	0	-	73242054	73242517	789624	3	183,125,239,	0,351,20879,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	73263214	73276517	chr6:73263214-73276517	1	+	73263214	73263214	8553170	3	202,130,751,	0,7183,12552,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	73263358	73301401	chr6:73263358-73301401	3	+	73263358	73263358	8553170	2	58,2345,	0,35698,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	73268050	73291340	chr6:73268050-73291340	1	+	73268050	73268050	8553170	3	2477,77,808,	0,16607,22482,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	73274138	73310143	chr6:73274138-73310143	2	-	73274138	73274138	8553170	3	1418,43,592,	0,17859,35413,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	73275045	73310365	chr6:73275045-73310365	0	-	73275045	73275045	789624	5	114,143,43,177,60,	0,368,16952,34506,35260,
#Deleted in new
chr6	73290402	73291262	chr6:73290402-73291262	7	+	73290402	73290402	16724991	1	860,	0,
#Deleted in new
chr6	73291961	73293277	chr6:73291961-73293277	7	+	73291961	73291961	16724991	1	1316,	0,
#Deleted in new
chr6	73322836	73323450	chr6:73322836-73323450	7	+	73322836	73322836	16724991	1	614,	0,
#Partially deleted in new
chr6	73327523	73329017	chr6:73327523-73329017	7	+	73327523	73327523	16724991	2	646,522,	0,972,
#Partially deleted in new
chr6	73353061	73354295	chr6:73353061-73354295	3	-	73353319	73354225	789624	3	317,180,182,	0,791,1052,
#Partially deleted in new
chr6	73362676	73364171	chr6:73362676-73364171	3	+	73362729	73363860	789624	3	222,180,616,	0,418,879,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	73368554	73395093	chr6:73368554-73395093	1	-	73368783	73394370	789624	4	309,180,143,375,	0,651,25791,26164,
#Partially deleted in new
chr6	73368755	73369792	chr6:73368755-73369792	3	-	73368783	73369792	789624	3	108,180,190,	0,450,847,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	73369209	73395133	chr6:73369209-73395133	0	-	73369209	73394370	789624	2	176,788,	0,25136,
#Deleted in new
chr6	73373107	73373263	chr6:73373107-73373263	7	-	73373107	73373107	16724991	1	156,	0,
#Deleted in new
chr6	73391037	73391767	chr6:73391037-73391767	7	-	73391037	73391037	16724991	1	730,	0,
#Partially deleted in new
chr6	73394747	73417569	chr6:73394747-73417569	3	+	73394905	73416226	789624	17	408,56,130,132,82,157,119,111,142,101,88,128,110,139,88,139,383,	0,2941,5486,7111,9942,10931,11616,12757,13212,14500,17457,18910,19222,19800,20749,21365,22439,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	73394893	73397994	chr6:73394893-73397994	0	+	73394893	73394893	8553170	2	262,306,	0,2795,
#Partially deleted in new
chr6	73406964	73414007	chr6:73406964-73414007	0	+	73406964	73406964	8553170	7	44,111,142,101,88,128,38,	0,540,995,2283,5240,6693,7005,
#Partially deleted in new
chr6	73413514	73452259	chr6:73413514-73452259	1	-	73414009	73452181	0	6	507,115,103,237,220,735,	0,11949,15194,26694,32013,38010,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	73423708	73452276	chr6:73423708-73452276	3	-	73425226	73452181	0	5	1870,103,237,220,752,	0,5000,16500,21819,27816,
#Partially deleted in new
chr6	73439742	73445685	chr6:73439742-73445685	0	-	73439742	73439742	8553170	2	703,158,	0,5785,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	73461577	73501096	chr6:73461577-73501096	1	+	73461854	73500735	789624	13	494,200,118,290,113,191,131,120,205,172,119,161,523,	0,4631,4911,11787,18154,18358,19097,19419,20462,20871,30656,36158,38996,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	73461577	73509236	chr6:73461577-73509236	1	+	73461854	73500735	789624	12	494,200,118,290,113,191,131,205,172,119,161,8663,	0,4631,4911,11787,18154,18358,19097,20462,20871,30656,36158,38996,
#Partially deleted in new
chr6	73461741	73479972	chr6:73461741-73479972	0	+	73466213	73479775	789624	5	53,200,118,113,37,	0,4467,4747,17990,18194,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	73461745	73500923	chr6:73461745-73500923	1	+	73466213	73500735	789624	13	49,200,118,290,113,191,75,131,205,172,119,161,350,	0,4463,4743,11619,17986,18190,18547,18929,20294,20703,30488,35990,38828,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	73461764	73501452	chr6:73461764-73501452	3	+	73461854	73500735	789624	13	307,200,118,290,113,191,75,131,205,172,119,161,879,	0,4444,4724,11600,17967,18171,18528,18910,20275,20684,30469,35971,38809,
#Partially deleted in new
chr6	73461764	73501096	chr6:73461764-73501096	0	+	73461764	73461764	8553170	11	307,200,118,290,395,131,205,172,119,161,523,	0,4444,4724,11600,17967,18910,20275,20684,30469,35971,38809,
#Partially deleted in new
chr6	73461764	73501096	chr6:73461764-73501096	0	+	73461854	73479775	789624	11	307,200,118,113,191,131,205,172,119,161,523,	0,4444,4724,17967,18171,18910,20275,20684,30469,35971,38809,
#Partially deleted in new
chr6	73461777	73473532	chr6:73461777-73473532	0	+	73461854	73462142	789624	4	396,200,118,168,	0,4431,4711,11587,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	73461794	73501050	chr6:73461794-73501050	0	+	73461794	73461794	8553170	11	277,200,118,113,432,131,216,172,119,161,477,	0,4414,4694,17937,18141,18880,20234,20654,30439,35941,38779,
#Partially deleted in new
chr6	73462142	73473411	chr6:73462142-73473411	0	+	73462142	73462142	8553170	4	180,200,118,47,	0,4066,4346,11222,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	73464072	73464177	chr6:73464072-73464177	3	+	73464072	73464072	8553170	1	105,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	73466262	73471795	chr6:73466262-73471795	0	+	73466262	73466262	8553170	3	146,118,336,	0,226,5197,
#Partially deleted in new
chr6	73473552	73480171	chr6:73473552-73480171	0	+	73473552	73473552	8553170	3	102,113,236,	0,6179,6383,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	73479999	73482534	chr6:73479999-73482534	0	+	73479999	73481039	789624	5	127,131,116,205,86,	0,675,1001,2040,2449,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	73480062	73480762	chr6:73480062-73480762	0	+	73480062	73480062	8553170	3	64,50,88,	0,255,612,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	73480165	73481028	chr6:73480165-73481028	0	+	73480165	73480165	8553170	3	202,131,28,	0,509,835,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	73480295	73492325	chr6:73480295-73492325	0	+	73480295	73482505	789624	4	72,131,172,92,	0,379,2153,11938,
#Partially deleted in new
chr6	73482114	73501038	chr6:73482114-73501038	0	+	73482114	73500587	789624	4	130,172,119,465,	0,334,10119,18459,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	73482131	73500701	chr6:73482131-73500701	0	+	73482131	73486658	789624	5	113,172,164,119,128,	0,317,4466,10102,18442,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	73487589	73487877	chr6:73487589-73487877	3	-	73487589	73487589	8553170	1	288,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	73492024	73492742	chr6:73492024-73492742	3	-	73492024	73492024	8553170	2	315,55,	0,663,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	73515749	73521018	chr6:73515749-73521018	1	-	73517809	73520026	0	7	2185,235,257,151,297,180,1136,	0,2280,2604,2948,3182,3587,4133,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	73515751	73521032	chr6:73515751-73521032	1	-	73517809	73520026	789624	9	2183,235,257,151,133,101,180,174,33,	0,2278,2602,2946,3180,3376,3585,4131,5248,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	73515751	73521032	chr6:73515751-73521032	3	-	73517915	73520026	789624	10	2183,239,210,21,20,151,297,180,174,33,	0,2274,2602,2816,2839,2946,3180,3585,4131,5248,
#Deleted in new
chr6	73517514	73521588	chr6:73517514-73521588	1	-	73517809	73520026	0	8	420,235,257,151,297,180,174,589,	0,515,839,1183,1417,1822,2368,3485,
#Deleted in new
chr6	73517514	73519417	chr6:73517514-73519417	0	-	73517514	73517514	8553170	3	304,248,81,	0,1466,1822,
#Deleted in new
chr6	73517518	73520059	chr6:73517518-73520059	0	-	73517518	73517518	8553170	6	416,581,151,297,180,177,	0,511,1179,1413,1818,2364,
#Deleted in new
chr6	73517520	73521721	chr6:73517520-73521721	1	-	73517809	73520026	0	8	414,235,257,151,297,180,174,215,	0,509,833,1177,1411,1816,2362,3986,
#Deleted in new
chr6	73518565	73520059	chr6:73518565-73520059	0	-	73518565	73518565	8553170	4	45,151,585,177,	0,132,366,1317,
#Deleted in new
chr6	73518793	73520059	chr6:73518793-73520059	0	-	73518793	73518793	8553170	3	435,180,177,	0,543,1089,
#Deleted in new
chr6	73519116	73521900	chr6:73519116-73521900	0	-	73519116	73520026	789624	4	112,180,174,169,	0,220,766,2615,
#Partially deleted in new
chr6	73519340	73523797	chr6:73519340-73523797	0	-	73519340	73520026	789624	3	176,174,351,	0,542,4106,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	73523617	73570533	chr6:73523617-73570533	3	+	73523617	73523617	8553170	3	218,91,247,	0,838,46669,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	73523840	73570596	chr6:73523840-73570596	1	+	73523840	73523840	8553170	4	68,91,117,310,	0,615,2045,46446,
#Deleted in new
chr6	73526743	73526879	chr6:73526743-73526879	7	-	73526743	73526743	16724991	1	136,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	73593378	73654155	chr6:73593378-73654155	3	-	73595076	73653886	789624	11	1836,91,148,133,159,119,87,88,234,197,363,	0,6972,17021,21936,28425,42003,43242,45033,48312,51028,60414,
#Partially deleted in new
chr6	73618345	73618597	chr6:73618345-73618597	7	+	73618345	73618345	16724991	1	252,	0,
#Partially deleted in new
chr6	73635232	73644463	chr6:73635232-73644463	0	-	73635232	73635232	8553170	5	268,87,88,234,57,	0,1388,3179,6458,9174,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	73693902	73696131	chr6:73693902-73696131	3	-	73693902	73693902	789624	2	1673,300,	0,1929,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr6	73695784	73828316	chr6:73695784-73828316	1	+	73696215	73823633	789624	32	505,173,29,126,40,85,97,142,110,225,102,63,177,153,75,61,142,118,114,219,145,177,82,229,166,191,156,66,143,148,103,4859,	0,1615,27466,40598,60858,63159,66599,66956,67791,70145,70974,71163,72270,75644,84639,85474,86829,87922,89579,91449,92683,96841,107435,111059,112298,114199,115207,116420,119196,122603,124676,127673,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr6	73695784	73828316	chr6:73695784-73828316	1	+	73696215	73823633	789624	33	505,173,29,231,126,40,85,97,142,110,225,102,63,177,153,75,61,142,118,114,219,145,177,82,229,166,191,105,66,143,148,103,4859,	0,1615,27466,34559,40598,60858,63159,66599,66956,67791,70145,70974,71163,72270,75644,84639,85474,86829,87922,89579,91449,92683,96841,107435,111059,112298,114199,115207,116420,119196,122603,124676,127673,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr6	73696103	73828313	chr6:73696103-73828313	3	+	73696215	73823633	789624	33	186,173,29,231,126,40,85,97,142,110,225,102,63,177,153,75,61,142,118,114,219,145,177,82,229,166,191,156,66,143,148,103,4856,	0,1296,27147,34240,40279,60539,62840,66280,66637,67472,69826,70655,70844,71951,75325,84320,85155,86510,87603,89260,91130,92364,96522,107116,110740,111979,113880,114888,116101,118877,122284,124357,127354,
#Partially deleted in new
chr6	73722940	73810172	chr6:73722940-73810172	0	+	73722940	73722940	8553170	26	219,29,231,126,40,85,97,142,110,225,102,63,177,153,75,61,142,118,114,219,145,177,82,229,166,189,	0,310,7403,13442,33702,36003,39443,39800,40635,42989,43818,44007,45114,48488,57483,58318,59673,60766,62423,64293,65527,69685,80279,83903,85142,87043,
#Partially deleted in new
chr6	73792654	73804076	chr6:73792654-73804076	0	+	73792654	73792654	8553170	3	148,82,111,	0,10565,11311,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	73971345	73973115	chr6:73971345-73973115	3	+	73971345	73971345	8553170	1	1770,	0,
#Partially deleted in new
chr6	74004519	74004812	chr6:74004519-74004812	7	-	74004519	74004519	16724991	1	293,	0,
#Partially deleted in new
chr6	74069450	74690727	chr6:74069450-74690727	3	+	74069450	74069450	789624	4	138,55,85,391,	0,277624,604613,620886,
#Partially deleted in new
chr6	74282265	74282660	chr6:74282265-74282660	7	+	74282265	74282265	16724991	1	395,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	74530247	74734279	chr6:74530247-74734279	3	-	74530247	74530247	8553170	3	350,69,199,	0,106315,203833,
#Deleted in new
chr6	74594178	74595213	chr6:74594178-74595213	1	-	74594178	74594178	8553170	2	434,153,	0,882,
#Partially deleted in new
chr6	74594582	74645640	chr6:74594582-74645640	0	-	74594582	74594582	8553170	3	30,69,59,	0,41980,50999,
#Deleted in new
chr6	74610448	74610715	chr6:74610448-74610715	7	-	74610448	74610448	16724991	1	267,	0,
#Partially deleted in new
chr6	74642383	74652002	chr6:74642383-74652002	3	+	74642383	74642383	8553170	2	166,275,	0,9344,
#Partially deleted in new
chr6	74849076	74850484	chr6:74849076-74850484	7	-	74849076	74849076	16724991	1	1408,	0,
#Partially deleted in new
chr6	75084325	75206051	chr6:75084325-75206051	3	-	75086546	75202792	789624	66	2232,171,69,189,67,36,72,54,54,54,96,54,87,78,150,110,143,139,39,165,144,124,140,75,147,117,147,120,130,143,130,143,130,140,130,143,21,133,140,130,137,130,143,130,140,147,165,120,150,122,193,267,273,273,273,273,603,291,174,165,264,60,144,117,108,275,	0,3251,4780,5784,6997,7164,10782,12927,17274,17673,18271,19431,20880,22093,24692,28878,29276,31458,31693,33056,34717,35024,36976,39004,39622,39929,40801,42025,43970,45765,46526,47614,48967,49532,50400,53111,53994,54122,54496,57706,58926,61000,61776,63349,64032,66815,67541,67805,68007,70090,71336,71931,81181,90712,93337,96613,98724,99528,104036,104891,105226,107375,107886,110505,118394,121451,
#Partially deleted in new
chr6	75084325	75119473	chr6:75084325-75119473	0	-	75085189	75119473	789624	22	1040,171,69,189,67,36,72,54,54,54,96,54,87,78,150,110,143,139,39,165,144,124,	0,3251,4780,5784,6997,7164,10782,12927,17274,17673,18271,19431,20880,22093,24692,28878,29276,31458,31693,33056,34717,35024,
#Partially deleted in new
chr6	75084325	75205907	chr6:75084325-75205907	1	-	75086546	75152480	789624	67	2232,171,69,189,67,36,72,54,54,54,96,54,87,78,150,110,143,139,39,165,5,139,124,140,75,147,117,147,120,130,143,130,143,130,140,130,143,21,133,140,130,137,130,143,130,140,147,165,120,150,122,193,267,273,273,273,273,603,291,174,165,264,60,144,117,108,131,	0,3251,4780,5784,6997,7164,10782,12927,17274,17673,18271,19431,20880,22093,24692,28878,29276,31458,31693,33056,33353,34722,35024,36976,39004,39622,39929,40801,42025,43970,45765,46526,47614,48967,49532,50400,53111,53994,54122,54496,57706,58926,61000,61776,63349,64032,66815,67541,67805,68007,70090,71336,71931,81181,90712,93337,96613,98724,99528,104036,104891,105226,107375,107886,110505,118394,121451,
#Partially deleted in new
chr6	75086470	75205851	chr6:75086470-75205851	1	-	75086546	75202792	789624	51	87,171,69,189,67,36,72,54,54,54,96,54,87,78,150,110,143,139,39,165,144,124,140,75,147,117,147,120,130,143,130,143,130,140,130,143,21,133,140,130,137,130,143,130,140,147,165,120,150,108,75,	0,1106,2635,3639,4852,5019,8637,10782,15129,15528,16126,17286,18735,19948,22547,26733,27131,29313,29548,30911,32572,32879,34831,36859,37477,37784,38656,39880,41825,43620,44381,45469,46822,47387,48255,50966,51849,51977,52351,55561,56781,58855,59631,61204,61887,64670,65396,65660,65862,116249,119306,
#Partially deleted in new
chr6	75086546	75202792	chr6:75086546-75202792	1	-	75086546	75202792	789624	63	11,171,69,189,67,36,72,54,54,54,96,54,87,110,143,139,39,165,144,124,140,75,147,117,147,120,130,143,130,143,130,140,130,143,21,133,140,130,137,130,143,130,140,147,165,120,150,122,193,267,273,273,273,273,603,291,174,165,264,60,144,117,73,	0,1030,2559,3563,4776,4943,8561,10706,15053,15452,16050,17210,18659,26657,27055,29237,29472,30835,32496,32803,34755,36783,37401,37708,38580,39804,41749,43544,44305,45393,46746,47311,48179,50890,51773,51901,52275,55485,56705,58779,59555,61128,61811,64594,65320,65584,65786,67869,69115,69710,78960,88491,91116,94392,96503,97307,101815,102670,103005,105154,105665,108284,116173,
#Partially deleted in new
chr6	75087189	75205822	chr6:75087189-75205822	1	-	75087556	75202792	789624	65	558,69,189,67,36,67,47,54,54,96,54,87,78,150,110,143,139,39,165,144,124,140,75,147,117,147,120,130,143,130,143,130,140,130,143,21,133,140,130,137,130,143,130,140,147,165,120,150,122,193,267,273,273,273,273,603,291,174,165,264,60,144,117,108,46,	0,1916,2920,4133,4300,7918,10070,14410,14809,15407,16567,18016,19229,21828,26014,26412,28594,28829,30192,31853,32160,34112,36140,36758,37065,37937,39161,41106,42901,43662,44750,46103,46668,47536,50247,51130,51258,51632,54842,56062,58136,58912,60485,61168,63951,64677,64941,65143,67226,68472,69067,78317,87848,90473,93749,95860,96664,101172,102027,102362,104511,105022,107641,115530,118587,
#Partially deleted in new
chr6	75089159	75101911	chr6:75089159-75101911	0	-	75089159	75089159	8553170	8	15,189,67,36,72,54,54,84,	0,950,2163,2330,5948,8093,12440,12668,
#Deleted in new
chr6	75113021	75119058	chr6:75113021-75119058	0	-	75113191	75119058	789624	6	292,143,139,39,165,16,	0,580,2762,2997,4360,6021,
#Partially deleted in new
chr6	75133375	75152189	chr6:75133375-75152189	0	-	75133375	75152189	789624	15	47,140,130,143,133,140,130,137,130,143,130,140,147,165,59,	0,482,1350,4061,5072,5446,8656,9876,11950,12726,14299,14982,17765,18491,18755,
#Partially deleted in new
chr6	75143203	75146285	chr6:75143203-75146285	0	-	75143203	75143203	8553170	3	185,130,184,	0,2122,2898,
#Partially deleted in new
chr6	75177651	75188464	chr6:75177651-75188464	0	-	75177651	75177651	8553170	5	284,273,603,291,103,	0,3287,5398,6202,10710,
#Partially deleted in new
chr6	75237674	75250323	chr6:75237674-75250323	3	-	75237929	75243830	789624	5	314,85,90,157,268,	0,2626,3501,6042,12381,
#Partially deleted in new
chr6	75237683	75244009	chr6:75237683-75244009	1	-	75237929	75243830	789624	4	305,85,90,293,	0,2617,3492,6033,
#Partially deleted in new
chr6	75237786	75243787	chr6:75237786-75243787	0	-	75241133	75243787	789624	4	202,85,143,71,	0,2514,3336,5930,
#Partially deleted in new
chr6	75237786	75243795	chr6:75237786-75243795	1	-	75237929	75243734	789624	4	202,109,90,79,	0,2490,3389,5930,
#Partially deleted in new
chr6	75237788	75243788	chr6:75237788-75243788	1	-	75237929	75243734	789624	3	200,85,72,	0,2512,5928,
#Partially deleted in new
chr6	75237822	75243785	chr6:75237822-75243785	1	-	75237865	75243734	789624	3	166,90,69,	0,3353,5894,
#Partially deleted in new
chr6	75240444	75243809	chr6:75240444-75243809	0	-	75240444	75240444	8553170	2	821,93,	0,3272,
#Partially deleted in new
chr6	75252923	75284968	chr6:75252923-75284968	3	-	75256101	75284638	789624	7	3372,207,144,88,108,108,567,	0,5856,6423,7900,12307,14717,31478,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	75253612	75272900	chr6:75253612-75272900	1	-	75256101	75265326	789624	7	2683,207,144,88,108,108,437,	0,5167,5734,7211,11618,14028,18851,
#Partially deleted in new
chr6	75254598	75284948	chr6:75254598-75284948	1	-	75256101	75284638	789624	6	1697,207,144,88,108,547,	0,4181,4748,6225,10632,29803,
#Partially deleted in new
chr6	75259441	75284311	chr6:75259441-75284311	0	-	75259441	75265326	789624	5	49,88,108,108,92,	0,1382,5789,8199,24778,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	75285013	75296567	chr6:75285013-75296567	1	+	75285013	75285013	8553170	3	296,102,47,	0,8479,11507,
#Partially deleted in new
chr6	75285032	75291501	chr6:75285032-75291501	1	+	75285032	75285032	789624	3	277,85,553,	0,5221,5916,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	75285045	75297003	chr6:75285045-75297003	3	+	75285045	75285045	8553170	2	264,483,	0,11475,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	75291858	75493629	chr6:75291858-75493629	1	-	75295909	75414972	789624	7	4092,58,2806,179,174,282,216,	0,16981,20538,61680,70885,122838,201555,
#Partially deleted in new
chr6	75308083	75493738	chr6:75308083-75493738	3	-	75308690	75414972	789624	6	814,2806,179,174,282,325,	0,4313,45455,54660,106613,185330,
#Partially deleted in new
chr6	75308087	75334790	chr6:75308087-75334790	0	-	75308087	75308087	8553170	3	810,2806,148,	0,4309,26555,
#Partially deleted in new
chr6	75308091	75363003	chr6:75308091-75363003	1	-	75308690	75362896	789624	4	806,2806,179,260,	0,4305,45447,54652,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	75319100	75319980	chr6:75319100-75319980	7	-	75319100	75319100	16724991	1	880,	0,
#Partially deleted in new
chr6	75357213	75363024	chr6:75357213-75363024	0	+	75357213	75357213	8553170	2	162,259,	0,5552,
#Partially deleted in new
chr6	75357224	75363014	chr6:75357224-75363014	0	+	75357224	75357224	8553170	5	151,53,104,162,249,	0,3442,3588,4627,5541,
#Partially deleted in new
chr6	75357243	75363014	chr6:75357243-75363014	0	+	75357243	75357243	8553170	4	132,104,162,249,	0,3569,4608,5522,
#Partially deleted in new
chr6	75357291	75363024	chr6:75357291-75363024	1	+	75357291	75357291	8553170	3	84,104,259,	0,3521,5474,
#Partially deleted in new
chr6	75357363	75399300	chr6:75357363-75399300	0	+	75357363	75357363	8553170	5	12,104,167,99,138,	0,3449,40574,41536,41799,
#Partially deleted in new
chr6	75358299	75361894	chr6:75358299-75361894	3	+	75358299	75358299	8553170	4	328,53,104,43,	0,2367,2513,3552,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	75360811	75367662	chr6:75360811-75367662	0	+	75360811	75360811	8553170	4	105,191,52,326,	0,1954,5225,6525,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	75360848	75386380	chr6:75360848-75386380	1	+	75360848	75360848	8553170	5	68,52,118,27,241,	0,5188,23971,24809,25291,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	75398859	75399067	chr6:75398859-75399067	3	-	75398859	75398859	8553170	1	208,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	75428406	75428473	chr6:75428406-75428473	3	+	75428406	75428406	5263520	1	67,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	75454943	75458900	chr6:75454943-75458900	3	+	75454943	75454943	8553170	4	58,132,75,196,	0,233,3218,3761,
#Partially deleted in new
chr6	75465122	75465570	chr6:75465122-75465570	7	+	75465122	75465122	16724991	1	448,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	75473737	75473894	chr6:75473737-75473894	3	-	75473737	75473737	8553170	1	157,	0,
#Deleted in new
chr6	75499704	75500136	chr6:75499704-75500136	7	+	75499704	75499704	16724991	1	432,	0,
#Deleted in new
chr6	75586121	75586461	chr6:75586121-75586461	7	+	75586121	75586121	16724991	1	340,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	75593054	75593145	chr6:75593054-75593145	3	+	75593054	75593054	8553170	1	91,	0,
#Partially deleted in new
chr6	75601508	75715904	chr6:75601508-75715904	3	+	75602524	75715594	789624	23	1068,94,61,146,105,71,146,298,230,168,34,195,227,110,117,120,93,428,104,89,69,151,520,	0,20023,22391,32072,33198,46222,57753,61712,65203,69044,73926,74351,75521,77074,77302,94295,95916,101136,108018,109819,112004,112166,113876,
#Partially deleted in new
chr6	75601926	75678975	chr6:75601926-75678975	1	+	75602524	75678931	789624	15	650,94,61,146,105,71,146,298,230,168,34,195,227,110,165,	0,19605,21973,31654,32780,45804,57335,61294,64785,68626,73508,73933,75103,76656,76884,
#Partially deleted in new
chr6	75602046	75718278	chr6:75602046-75718278	1	+	75602524	75715594	789624	24	530,94,61,146,105,21,71,146,298,230,168,34,195,227,110,117,120,93,428,104,89,69,151,2894,	0,19485,21853,31534,32660,38637,45684,57215,61174,64665,68506,73388,73813,74983,76536,76764,93757,95378,100598,107480,109281,111466,111628,113338,
#Partially deleted in new
chr6	75602223	75634811	chr6:75602223-75634811	0	+	75602524	75622829	789624	6	353,94,108,61,146,105,	0,19308,20527,21676,31357,32483,
#Partially deleted in new
chr6	75610957	75611788	chr6:75610957-75611788	7	-	75610957	75610957	16724991	1	831,	0,
#Partially deleted in new
chr6	75611189	75611945	chr6:75611189-75611945	5	-	75611189	75611189	16724991	1	756,	0,
#Partially deleted in new
chr6	75620662	75663514	chr6:75620662-75663514	0	+	75633700	75663514	789624	9	78,94,61,146,105,18,71,146,294,	0,869,3237,12918,14044,20024,27068,38599,42558,
#Partially deleted in new
chr6	75633649	75635056	chr6:75633649-75635056	0	+	75633649	75633649	8553170	2	77,350,	0,1057,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	75633703	75679867	chr6:75633703-75679867	0	+	75633703	75678931	789624	13	23,105,21,71,146,298,230,168,34,195,227,110,1057,	0,1003,6980,14027,25558,29517,33008,36849,41731,42156,43326,44879,45107,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	75644083	75644177	chr6:75644083-75644177	3	+	75644083	75644083	8553170	1	94,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	75646510	75663257	chr6:75646510-75663257	0	+	75646510	75646510	8553170	4	341,71,146,37,	0,1220,12751,16710,
#Partially deleted in new
chr6	75647291	75663505	chr6:75647291-75663505	0	+	75647291	75647291	8553170	3	510,146,285,	0,11970,15929,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	75654969	75655299	chr6:75654969-75655299	3	-	75654969	75654969	8553170	1	330,	0,
#Partially deleted in new
chr6	75666870	75715877	chr6:75666870-75715877	0	+	75666870	75709557	789624	14	71,168,34,195,227,110,117,120,93,104,89,69,151,493,	0,3682,8564,8989,10159,11712,11940,28933,30554,42656,44457,46642,46804,48514,
#Deleted in new
chr6	75676603	75678975	chr6:75676603-75678975	0	+	75676603	75676603	8553170	2	2089,165,	0,2207,
#Partially deleted in new
chr6	75678810	75697989	chr6:75678810-75697989	0	+	75678810	75678810	8553170	3	117,120,565,	0,16993,18614,
#Deleted in new
chr6	75744274	75744840	chr6:75744274-75744840	7	+	75744274	75744274	16724991	1	566,	0,
#Boundary problem: need 36, got 0, diff 36, mapped 0.0
chr6	75749191	75919537	chr6:75749191-75919537	1	+	75817547	75915012	789624	36	232,164,70,74,130,106,56,98,165,81,181,145,158,92,73,128,96,174,39,94,131,78,130,91,151,209,79,164,27,30,39,104,132,27,219,4725,	0,68309,73590,79348,81224,83650,86709,91393,92022,95705,99159,105947,107905,109710,111831,113404,117334,117740,121455,124015,130628,130851,132497,136812,137652,140865,142036,143338,145622,146039,149181,158413,159304,162480,164871,165621,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr6	75749208	75919536	chr6:75749208-75919536	3	+	75817547	75915012	789624	33	215,164,70,74,130,106,56,98,165,81,181,145,158,92,73,128,96,174,39,94,131,78,130,91,151,209,79,161,104,132,27,219,4724,	0,68292,73573,79331,81207,83633,86692,91376,92005,95688,99142,105930,107888,109693,111814,113387,117317,117723,121438,123998,130611,130834,132480,136795,137635,140848,142019,143321,158396,159287,162463,164854,165604,
#Partially deleted in new
chr6	75749331	75916612	chr6:75749331-75916612	1	+	75817547	75915012	789624	35	92,164,70,74,130,106,56,98,165,81,181,145,158,92,73,128,96,174,39,94,131,78,130,91,151,209,79,161,30,39,104,132,27,219,1800,	0,68169,73450,79208,81084,83510,86569,91253,91882,95565,99019,105807,107765,109570,111691,113264,117194,117600,121315,123875,130488,130711,132357,136672,137512,140725,141896,143198,145899,149041,158273,159164,162340,164731,165481,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	75768058	75768158	chr6:75768058-75768158	3	-	75768058	75768058	8553170	1	100,	0,
#Partially deleted in new
chr6	75817515	75915217	chr6:75817515-75915217	1	+	75817547	75915012	789624	32	149,70,74,130,106,56,98,165,81,181,145,158,92,73,128,96,174,39,94,131,78,130,91,151,209,79,161,104,132,27,219,405,	0,5266,11024,12900,15326,18385,23069,23698,27381,30835,37623,39581,41386,43507,45080,49010,49416,53131,55691,62304,62527,64173,68488,69328,72541,73712,75014,90089,90980,94156,96547,97297,
#Partially deleted in new
chr6	75817522	75916612	chr6:75817522-75916612	1	+	75817547	75915012	789624	31	142,70,74,130,106,56,98,165,81,181,145,158,92,73,128,96,174,39,94,131,78,130,91,151,209,79,161,104,132,219,1800,	0,5259,11017,12893,15319,18378,23062,23691,27374,30828,37616,39574,41379,43500,45073,49003,49409,53124,55684,62297,62520,64166,68481,69321,72534,73705,75007,90082,90973,96540,97290,
#Partially deleted in new
chr6	75817523	75915177	chr6:75817523-75915177	1	+	75817547	75915012	789624	35	141,70,74,130,106,56,98,165,81,181,145,158,92,73,128,96,174,39,94,131,78,130,91,151,209,79,161,27,30,39,104,132,27,219,365,	0,5258,11016,12892,15318,18377,23061,23690,27373,30827,37615,39573,41378,43499,45072,49002,49408,53123,55683,62296,62519,64165,68480,69320,72533,73704,75006,77290,77707,80849,90081,90972,94148,96539,97289,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	75865238	75865335	chr6:75865238-75865335	7	-	75865238	75865238	16724991	1	97,	0,
#Partially deleted in new
chr6	75867059	75881818	chr6:75867059-75881818	0	+	75867059	75867059	8553170	7	46,93,39,94,131,78,130,	0,371,3587,6147,12760,12983,14629,
#Partially deleted in new
chr6	75890209	75908560	chr6:75890209-75908560	0	+	75890209	75908560	789624	7	56,79,161,27,30,104,65,	0,1018,2320,4604,5021,17395,18286,
#Partially deleted in new
chr6	75921114	76072678	chr6:75921114-76072678	1	-	75922088	76072488	789624	17	1052,73,199,220,533,79,77,248,21,59,141,104,65,29,167,234,257,	0,2519,9838,26199,29447,81803,82759,84172,86365,90051,97603,101001,104079,113200,113506,120778,151307,
#Partially deleted in new
chr6	75921114	76072678	chr6:75921114-76072678	3	-	75922088	76072488	789624	16	1052,73,199,220,533,79,77,248,21,59,141,104,65,29,167,257,	0,2519,9838,26199,29447,81803,82759,84172,86365,90051,97603,101001,104079,113200,113506,151307,
#Partially deleted in new
chr6	75921730	75935049	chr6:75921730-75935049	0	-	75922088	75935049	789624	4	436,73,199,127,	0,1903,9222,13192,
#Deleted in new
chr6	75928512	75928625	chr6:75928512-75928625	3	+	75928512	75928512	8553170	1	113,	0,
#Partially deleted in new
chr6	76024897	76072678	chr6:76024897-76072678	1	-	76024897	76041938	789624	6	116,65,29,167,234,257,	0,296,9417,9723,16995,47524,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	76092833	76092940	chr6:76092833-76092940	3	+	76092833	76092833	8553170	1	107,	0,
#Deleted in new
chr6	76446987	76447089	chr6:76446987-76447089	3	-	76446987	76446987	8553170	1	102,	0,
#Partially deleted in new
chr6	76522450	76593623	chr6:76522450-76593623	3	-	76522450	76522450	789624	3	354,119,97,	0,63997,71076,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	76561327	76562590	chr6:76561327-76562590	3	+	76561327	76561327	8553170	2	340,287,	0,976,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	76660485	76662770	chr6:76660485-76662770	7	+	76660485	76660485	16724991	1	2285,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	76774982	76775860	chr6:76774982-76775860	3	+	76774982	76774982	8553170	2	93,693,	0,185,
#Deleted in new
chr6	77343556	77343654	chr6:77343556-77343654	7	+	77343556	77343556	16724991	1	98,	0,
#Deleted in new
chr6	77461752	77463773	chr6:77461752-77463773	3	-	77462230	77463403	0	1	2021,	0,
#Deleted in new
chr6	77496118	77496671	chr6:77496118-77496671	7	+	77496118	77496118	16724991	1	553,	0,
#Partially deleted in new
chr6	77650273	77927028	chr6:77650273-77927028	3	+	77690671	77923346	789624	5	434,246,536,132,3940,	0,40384,110856,178657,272815,
#Partially deleted in new
chr6	77690655	77924759	chr6:77690655-77924759	1	+	77690671	77923346	789624	4	248,536,132,1671,	0,70474,138275,232433,
#Deleted in new
chr6	78604466	78606036	chr6:78604466-78606036	3	-	78604466	78604466	8553170	2	105,282,	0,1288,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	78809714	78813303	chr6:78809714-78813303	3	-	78809714	78809714	8553170	2	2450,182,	0,3407,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	78867471	78903102	chr6:78867471-78903102	3	+	78867576	78898334	789624	4	420,66,131,5039,	0,17906,30357,30592,
#Partially deleted in new
chr6	78867606	78946440	chr6:78867606-78946440	0	+	78867606	78903043	789624	5	285,66,131,119,1033,	0,17771,30222,35385,77801,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	78871290	78903101	chr6:78871290-78903101	1	+	78872081	78903084	789624	5	845,66,131,235,110,	0,14087,26538,26773,31701,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	78898191	78903102	chr6:78898191-78903102	0	+	78898191	78902645	789624	2	107,484,	0,4427,
#Partially deleted in new
chr6	78935866	79078236	chr6:78935866-79078236	3	-	78940692	79078068	0	40	5464,198,260,164,153,150,51,70,126,121,156,62,112,83,125,108,120,232,77,141,118,184,138,226,129,135,154,99,41,101,71,101,222,161,99,151,60,30,59,208,	0,9433,10134,10844,11756,18947,19365,19746,22608,25823,27230,29836,30078,33968,34182,34914,42725,47019,49485,52342,55001,61547,62387,66032,67863,79215,79763,80677,81479,81616,83222,89652,90076,106976,124611,124801,141581,141833,141988,142162,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr6	78940545	78982943	chr6:78940545-78982943	0	-	78940545	78940545	8553170	17	785,198,260,164,153,150,51,2988,121,156,62,112,83,125,108,120,58,	0,4754,5455,6165,7077,14268,14686,15067,21144,22551,25157,25399,29289,29503,30235,38046,42340,
#Deleted in new
chr6	79067691	79068138	chr6:79067691-79068138	7	-	79067691	79067691	16724991	1	447,	0,
#Partially deleted in new
chr6	79201244	79234689	chr6:79201244-79234689	1	-	79201712	79234560	789624	6	482,73,51,30,51,144,	0,1072,2335,7302,13727,33301,
#Partially deleted in new
chr6	79201244	79234689	chr6:79201244-79234689	3	-	79201687	79234560	789624	6	482,114,51,30,51,144,	0,1031,2335,7302,13727,33301,
#Partially deleted in new
chr6	79201248	79234738	chr6:79201248-79234738	1	-	79201687	79234560	789624	7	478,93,114,51,30,51,193,	0,814,1027,2331,7298,13723,33297,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	79233717	79236797	chr6:79233717-79236797	3	+	79233717	79233717	789624	2	210,2736,	0,344,
#Deleted in new
chr6	79278104	79278427	chr6:79278104-79278427	7	-	79278104	79278104	16724991	1	323,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	79301962	79302066	chr6:79301962-79302066	3	-	79301962	79301962	8553170	1	104,	0,
#Deleted in new
chr6	79326567	79327207	chr6:79326567-79327207	7	-	79326567	79326567	16724991	1	640,	0,
#Deleted in new
chr6	79354442	79354713	chr6:79354442-79354713	7	-	79354442	79354442	16724991	1	271,	0,
#Partially deleted in new
chr6	79406239	79406774	chr6:79406239-79406774	7	-	79406239	79406239	16724991	1	535,	0,
#Partially deleted in new
chr6	79420296	79421305	chr6:79420296-79421305	3	+	79420296	79420296	8553170	3	108,98,268,	0,243,741,
#Partially deleted in new
chr6	79436907	79437167	chr6:79436907-79437167	7	-	79436907	79436907	16724991	1	260,	0,
#Partially deleted in new
chr6	79484990	79537408	chr6:79484990-79537408	1	-	79487003	79518894	789624	8	2876,133,143,97,138,530,381,244,	0,4093,6597,7560,8622,28221,33714,52174,
#Partially deleted in new
chr6	79484990	79537430	chr6:79484990-79537430	3	-	79487003	79518894	789624	9	2876,133,143,97,138,530,381,106,315,	0,4093,6597,7560,8622,28221,33714,40173,52125,
#Partially deleted in new
chr6	79487827	79537458	chr6:79487827-79537458	1	-	79489021	79518894	789624	7	1389,143,97,138,530,381,216,	0,3760,4723,5785,25384,30877,49415,
#Partially deleted in new
chr6	79552793	79553160	chr6:79552793-79553160	7	+	79552793	79552793	16724991	1	367,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	79561131	79561602	chr6:79561131-79561602	3	+	79561131	79561131	8553170	1	471,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	79573876	79575530	chr6:79573876-79575530	3	+	79573876	79573876	8553170	1	1654,	0,
#Partially deleted in new
chr6	79631282	79703659	chr6:79631282-79703659	3	+	79631461	79699509	0	4	224,186,81,4162,	0,42331,65202,68215,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	79803582	79807225	chr6:79803582-79807225	3	-	79803582	79803582	8553170	3	316,153,12,	0,2313,3631,
#Partially deleted in new
chr6	79854683	79855632	chr6:79854683-79855632	7	+	79854683	79854683	16724991	1	949,	0,
#Partially deleted in new
chr6	79868401	79870483	chr6:79868401-79870483	3	+	79868401	79868401	8553170	3	239,213,831,	0,768,1251,
#Partially deleted in new
chr6	79871872	79874610	chr6:79871872-79874610	3	+	79871872	79871872	8553170	2	14,311,	0,2427,
#Partially deleted in new
chr6	79914811	79947580	chr6:79914811-79947580	3	-	79916607	79947279	789624	6	2072,128,172,81,188,401,	0,4608,6813,10140,11382,32368,
#Partially deleted in new
chr6	79953004	79954011	chr6:79953004-79954011	7	-	79953004	79953004	16724991	1	1007,	0,
#Deleted in new
chr6	79964214	79964519	chr6:79964214-79964519	7	+	79964214	79964214	16724991	1	305,	0,
#Partially deleted in new
chr6	80003886	80042527	chr6:80003886-80042527	1	+	80005843	80042202	0	22	827,141,223,107,144,115,73,95,88,124,149,134,127,93,158,152,125,81,177,85,98,409,	0,1955,3922,4499,6927,7547,7842,7999,9392,10576,18437,22494,23998,27580,31098,31379,32588,34080,35809,36309,36719,38232,
#Partially deleted in new
chr6	80004146	80042527	chr6:80004146-80042527	3	+	80005843	80042202	0	22	567,153,223,107,144,115,73,95,88,124,149,134,127,93,158,152,125,81,177,85,98,409,	0,1683,3662,4239,6667,7287,7582,7739,9132,10316,18177,22234,23738,27320,30838,31119,32328,33820,35549,36049,36459,37972,
#Partially deleted in new
chr6	80004604	80042527	chr6:80004604-80042527	1	+	80005843	80042202	0	22	109,141,223,107,144,115,73,95,88,124,149,137,127,93,158,152,125,81,177,85,98,409,	0,1237,3204,3781,6209,6829,7124,7281,8674,9858,17719,21773,23280,26862,30380,30661,31870,33362,35091,35591,36001,37514,
#Deleted in new
chr6	80004649	80008416	chr6:80004649-80008416	0	+	80005843	80007838	789624	5	64,141,71,223,31,	0,1192,1455,3159,3736,
#Deleted in new
chr6	80004709	80008440	chr6:80004709-80008440	0	+	80005843	80008440	789624	4	122,141,223,55,	0,1132,3099,3676,
#Deleted in new
chr6	80004833	80008475	chr6:80004833-80008475	0	+	80005843	80008475	789624	4	95,141,223,90,	0,1008,2975,3552,
#Deleted in new
chr6	80005801	80010871	chr6:80005801-80010871	0	+	80005843	80010871	789624	4	181,223,107,58,	0,2007,2584,5012,
#Deleted in new
chr6	80005843	80007838	chr6:80005843-80007838	1	+	80005843	80007838	789624	3	139,71,30,	0,261,1965,
#Deleted in new
chr6	80005940	80011553	chr6:80005940-80011553	0	+	80005940	80005940	8553170	5	42,223,107,144,64,	0,1868,2445,4873,5549,
#Partially deleted in new
chr6	80013454	80027950	chr6:80013454-80027950	0	+	80013454	80013454	8553170	5	108,124,149,137,66,	0,1008,8869,12923,14430,
#Deleted in new
chr6	80037552	80040271	chr6:80037552-80040271	0	+	80037552	80037552	8553170	3	495,177,76,	0,2143,2643,
#Deleted in new
chr6	80064285	80070199	chr6:80064285-80070199	7	-	80064285	80064285	16724991	1	5914,	0,
#Deleted in new
chr6	80077728	80078362	chr6:80077728-80078362	7	-	80077728	80077728	16724991	1	634,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	80106646	80346270	chr6:80106646-80346270	3	+	80106693	80343804	0	10	243,78,69,134,156,109,98,111,87,2607,	0,20900,22514,61031,62228,64635,94287,96455,166488,237017,
#Partially deleted in new
chr6	80106646	80346254	chr6:80106646-80346254	1	+	80106693	80343804	0	11	243,78,69,134,156,109,98,111,87,149,280,	0,20900,22514,61031,62228,64635,94287,96455,166488,237017,239328,
#Partially deleted in new
chr6	80106646	80169873	chr6:80106646-80169873	1	+	80106693	80169834	0	6	243,78,69,134,156,63,	0,20900,22514,61031,62228,63164,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	80127268	80135887	chr6:80127268-80135887	0	+	80127268	80127268	8553170	4	110,78,69,43,	0,278,1892,8576,
#Partially deleted in new
chr6	80203101	80273190	chr6:80203101-80273190	0	+	80203101	80203101	8553170	3	111,70,56,	0,48610,70033,
#Partially deleted in new
chr6	80343570	80346254	chr6:80343570-80346254	0	+	80343570	80343570	8553170	2	242,280,	0,2404,
#Deleted in new
chr6	80355423	80356859	chr6:80355423-80356859	3	+	80355423	80355423	8553170	1	1436,	0,
#Partially deleted in new
chr6	80374014	80374569	chr6:80374014-80374569	7	-	80374014	80374014	16724991	1	555,	0,
#Deleted in new
chr6	80440729	80441172	chr6:80440729-80441172	3	+	80440729	80440729	8553170	1	443,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	80443343	80465927	chr6:80443343-80465927	3	+	80443343	80443343	8553170	4	195,105,201,181,	0,9813,19528,22403,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	80443389	80463053	chr6:80443389-80463053	0	+	80443389	80443389	8553170	4	149,105,118,182,	0,9767,10720,19482,
#Partially deleted in new
chr6	80453198	80463207	chr6:80453198-80463207	0	+	80453198	80453198	8553170	3	63,118,336,	0,911,9673,
#Deleted in new
chr6	80466957	80469080	chr6:80466957-80469080	1	+	80466957	80466957	8553170	1	2123,	0,
#Deleted in new
chr6	80467248	80469030	chr6:80467248-80469030	3	+	80467248	80467248	8553170	2	844,397,	0,1385,
#Deleted in new
chr6	80470070	80470428	chr6:80470070-80470428	7	-	80470070	80470070	16724991	1	358,	0,
#Partially deleted in new
chr6	80499195	80499392	chr6:80499195-80499392	7	-	80499195	80499195	16724991	1	197,	0,
#Deleted in new
chr6	80555840	80557189	chr6:80555840-80557189	7	-	80555840	80555840	16724991	1	1349,	0,
#Partially deleted in new
chr6	81491438	81751812	chr6:81491438-81751812	0	-	81495071	81751812	789624	3	243,80,223,	0,3595,260151,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	81527101	81534913	chr6:81527101-81534913	3	-	81527101	81527101	8553170	2	444,340,	0,7472,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	81527366	81534915	chr6:81527366-81534915	1	-	81527366	81527366	8553170	3	179,71,69,	0,7207,7480,
#Deleted in new
chr6	81551685	81554092	chr6:81551685-81554092	3	+	81551685	81551685	8553170	1	2407,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	81622199	81622319	chr6:81622199-81622319	7	+	81622199	81622199	16724991	1	120,	0,
#Partially deleted in new
chr6	81724721	81736353	chr6:81724721-81736353	3	-	81724721	81724721	8553170	4	144,136,87,104,	0,3535,6764,11528,
#Deleted in new
chr6	81745729	81752708	chr6:81745729-81752708	3	-	81749694	81752141	789624	3	4742,589,278,	0,5860,6701,
#Deleted in new
chr6	81745729	81752708	chr6:81745729-81752708	1	-	81749694	81752395	789624	3	4742,589,333,	0,5860,6646,
#Deleted in new
chr6	81745729	81752774	chr6:81745729-81752774	1	-	81749694	81752774	789624	3	4742,589,206,	0,5860,6839,
#Deleted in new
chr6	81749869	81751753	chr6:81749869-81751753	0	-	81749965	81751753	789624	2	192,164,	0,1720,
#Deleted in new
chr6	81764023	81764156	chr6:81764023-81764156	3	+	81764023	81764023	8553170	1	133,	0,
#Deleted in new
chr6	81764210	81764503	chr6:81764210-81764503	7	+	81764210	81764210	16724991	1	293,	0,
#Deleted in new
chr6	81813285	81814157	chr6:81813285-81814157	3	-	81813285	81813285	789624	2	391,129,	0,743,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	81845184	81933480	chr6:81845184-81933480	3	-	81845184	81845184	8553170	3	725,45,52,	0,83672,88244,
#Deleted in new
chr6	81969452	81969539	chr6:81969452-81969539	3	-	81969452	81969452	8553170	1	87,	0,
#Partially deleted in new
chr6	82169982	82247754	chr6:82169982-82247754	3	-	82171424	82240486	789624	29	1574,133,72,150,144,93,164,149,113,122,61,118,102,97,38,83,87,603,175,178,124,181,118,171,111,125,97,678,193,	0,2397,3384,11896,21090,21804,24496,26315,30158,30604,31439,32545,34874,40831,41384,41507,42724,44244,46093,47977,50607,53457,54085,55494,57209,61735,64176,70183,77579,
#Partially deleted in new
chr6	82169985	82240565	chr6:82169985-82240565	0	-	82169985	82169985	8553170	26	1571,133,72,150,807,164,149,113,122,61,118,102,97,38,83,87,175,178,124,181,118,171,111,125,97,400,	0,2394,3381,11893,21087,24493,26312,30155,30601,31436,32542,34871,40828,41381,41504,42721,46090,47974,50604,53454,54082,55491,57206,61732,64173,70180,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	82170235	82173578	chr6:82170235-82173578	0	-	82170235	82170235	8553170	2	1321,1199,	0,2144,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	82170238	82205929	chr6:82170238-82205929	0	-	82170238	82170238	8553170	13	1318,133,72,150,144,93,117,149,113,122,61,118,1073,	0,2141,3128,11640,20834,21548,24240,26059,29902,30348,31183,32289,34618,
#Partially deleted in new
chr6	82170238	82247754	chr6:82170238-82247754	1	-	82171424	82240486	789624	28	1318,133,72,150,144,93,164,149,113,122,61,118,102,97,38,83,87,175,178,124,181,118,171,111,125,97,678,193,	0,2141,3128,11640,20834,21548,24240,26059,29902,30348,31183,32289,34618,40575,41128,41251,42468,45837,47721,50351,53201,53829,55238,56953,61479,63920,69927,77323,
#Partially deleted in new
chr6	82170742	82247671	chr6:82170742-82247671	0	-	82225612	82240486	789624	29	814,133,72,150,144,93,164,149,113,122,61,118,102,97,38,83,87,603,175,178,124,181,118,171,139,125,97,678,110,	0,1637,2624,11136,20330,21044,23736,25555,29398,29844,30679,31785,34114,40071,40624,40747,41964,43484,45333,47217,49847,52697,53325,54734,56421,60975,63416,69423,76819,
#Partially deleted in new
chr6	82171402	82240565	chr6:82171402-82240565	1	-	82171424	82240486	789624	27	154,133,72,150,144,93,164,149,113,122,61,118,102,97,38,83,87,175,178,124,181,118,171,111,125,97,400,	0,977,1964,10476,19670,20384,23076,24895,28738,29184,30019,31125,33454,39411,39964,40087,41304,44673,46557,49187,52037,52665,54074,55789,60315,62756,68763,
#Partially deleted in new
chr6	82171411	82240565	chr6:82171411-82240565	1	-	82171424	82240486	789624	28	145,133,72,150,144,93,164,104,113,122,61,118,102,97,38,83,87,603,175,178,124,181,118,171,111,125,97,400,	0,968,1955,10467,19661,20375,23067,24886,28729,29175,30010,31116,33445,39402,39955,40078,41295,42815,44664,46548,49178,52028,52656,54065,55780,60306,62747,68754,
#Partially deleted in new
chr6	82171507	82191854	chr6:82171507-82191854	0	-	82174977	82191854	789624	7	49,133,72,105,150,144,68,	0,872,1859,3390,10371,19565,20279,
#Partially deleted in new
chr6	82191330	82247754	chr6:82191330-82247754	0	-	82191330	82191330	8553170	24	549,164,149,113,122,61,118,102,97,38,83,87,603,175,178,124,181,118,171,111,125,97,678,193,	0,3148,4967,8810,9256,10091,11197,13526,19483,20036,20159,21376,22896,24745,26629,29259,32109,32737,34146,35861,40387,42828,48835,56231,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	82210337	82210440	chr6:82210337-82210440	3	-	82210337	82210337	8553170	1	103,	0,
#Partially deleted in new
chr6	82263995	82264974	chr6:82263995-82264974	7	-	82263995	82263995	16724991	1	979,	0,
#Deleted in new
chr6	82363205	82367417	chr6:82363205-82367417	1	+	82364961	82366224	0	3	334,263,2795,	0,440,1417,
#Deleted in new
chr6	82363630	82370828	chr6:82363630-82370828	3	+	82364961	82366224	0	2	278,6206,	0,992,
#Deleted in new
chr6	82364243	82367417	chr6:82364243-82367417	1	+	82364961	82366224	0	2	86,2795,	0,379,
#Partially deleted in new
chr6	82892397	83065841	chr6:82892397-83065841	0	-	83057950	83065718	789624	10	645,139,164,109,70,70,232,91,197,162,	0,64914,126575,130055,131571,146018,152030,161750,165428,173282,
#Partially deleted in new
chr6	82892397	83065841	chr6:82892397-83065841	3	-	82893021	83065718	789624	10	645,139,164,109,70,70,232,91,197,200,	0,64914,126575,130055,131571,146018,152030,161750,165428,173244,
#Deleted in new
chr6	82892466	82894033	chr6:82892466-82894033	0	-	82892466	82892466	8553170	2	576,70,	0,1497,
#Partially deleted in new
chr6	82892952	83065751	chr6:82892952-83065751	0	-	83019101	83065718	789624	10	90,139,164,83,70,70,232,91,197,110,	0,64359,126020,129526,131016,145463,151475,161195,164873,172689,
#Partially deleted in new
chr6	82893024	83065839	chr6:82893024-83065839	0	-	83049768	83065718	789624	11	18,139,164,109,70,70,232,64,91,197,198,	0,64287,125948,129428,130944,145391,151403,156684,161123,164801,172617,
#Deleted in new
chr6	82924828	82925122	chr6:82924828-82925122	7	-	82924828	82924828	16724991	1	294,	0,
#Partially deleted in new
chr6	82932600	82938677	chr6:82932600-82938677	3	+	82932600	82932600	8553170	2	39,441,	0,5636,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	83017181	83057969	chr6:83017181-83057969	0	-	83032296	83057969	789624	8	1955,109,70,69,70,232,91,144,	0,5271,6787,15060,21234,27246,36966,40644,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	83036025	83065823	chr6:83036025-83065823	0	-	83063208	83065718	789624	6	2460,232,91,197,93,182,	0,8402,18122,21800,27127,29616,
#Partially deleted in new
chr6	83067665	83168471	chr6:83067665-83168471	1	+	83096977	83168167	789624	40	114,93,191,182,171,190,99,100,83,109,121,120,115,30,234,622,275,153,101,260,1990,112,183,126,135,56,105,67,145,80,110,150,62,153,137,56,165,130,60,610,	0,29065,29259,33039,41244,42459,45657,51222,52109,53017,54264,55197,57039,57500,57834,61221,62457,64510,66521,67953,69507,72334,72555,74255,77858,79570,81093,83927,84217,84622,85845,86228,86514,88285,89516,90901,92130,95124,96994,100196,
#Partially deleted in new
chr6	83067665	83168719	chr6:83067665-83168719	3	+	83096977	83168167	789624	39	114,93,191,182,171,190,99,100,110,109,121,120,115,30,234,622,275,153,101,260,1990,112,183,126,135,56,105,67,145,80,110,150,62,153,137,56,165,130,858,	0,29065,29259,33039,41244,42459,45657,51222,52082,53017,54264,55197,57039,57500,57834,61221,62457,64510,66521,67953,69507,72334,72555,74255,77858,79570,81093,83927,84217,84622,85845,86228,86514,88285,89516,90901,92130,95124,100196,
#Partially deleted in new
chr6	83096728	83168331	chr6:83096728-83168331	1	+	83096977	83168167	789624	39	95,191,182,171,190,99,100,83,109,121,120,115,30,234,622,275,153,101,260,1990,112,183,126,135,56,105,67,145,80,110,150,62,153,137,56,165,130,60,470,	0,196,3976,12181,13396,16594,22159,23046,23954,25201,26134,27976,28437,28771,32158,33394,35447,37458,38890,40444,43271,43492,45192,48795,50507,52030,54864,55154,55559,56782,57165,57451,59222,60453,61838,63067,66061,67931,71133,
#Partially deleted in new
chr6	83122862	83128928	chr6:83122862-83128928	0	+	83122862	83128928	789624	4	120,115,234,42,	0,1842,2637,6024,
#Partially deleted in new
chr6	83130213	83134480	chr6:83130213-83134480	0	+	83130213	83130213	8553170	3	184,153,294,	0,1962,3973,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr6	83137675	83171350	chr6:83137675-83171350	0	+	83137675	83137675	8553170	21	1487,112,183,126,135,56,105,67,145,80,110,150,62,153,137,56,165,130,895,57,1062,	0,2324,2545,4245,7848,9560,11083,13917,14207,14612,15835,16218,16504,18275,19506,20891,22120,25114,30186,31802,32613,
#Partially deleted in new
chr6	83153391	83154273	chr6:83153391-83154273	0	+	83153391	83153391	8553170	2	652,94,	0,788,
#Partially deleted in new
chr6	83161149	83172013	chr6:83161149-83172013	0	-	83169233	83172013	789624	4	93,261,174,77,	0,7913,9155,10787,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	83164872	83193293	chr6:83164872-83193293	3	-	83169233	83191012	789624	13	4451,174,123,114,99,84,158,196,134,68,185,206,115,	0,5432,7064,9501,11089,13800,14937,16863,17972,22135,23741,25936,28306,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	83164872	83193293	chr6:83164872-83193293	1	-	83169297	83188759	789624	12	4451,178,123,114,99,84,158,196,134,68,185,115,	0,5428,7064,9501,11089,13800,14937,16863,17972,22135,23741,28306,
#Partially deleted in new
chr6	83168527	83193266	chr6:83168527-83193266	1	-	83169233	83188759	789624	12	796,174,123,114,99,84,158,196,134,68,185,88,	0,1777,3409,5846,7434,10145,11282,13208,14317,18480,20086,24651,
#Partially deleted in new
chr6	83169122	83193914	chr6:83169122-83193914	1	-	83169233	83191268	789624	14	201,174,123,114,99,84,158,196,134,68,185,206,137,92,	0,1182,2814,5251,6839,9550,10687,12613,13722,17885,19491,21686,22064,24700,
#Partially deleted in new
chr6	83169520	83175982	chr6:83169520-83175982	0	-	83169679	83175982	789624	5	321,174,123,114,21,	0,784,2416,4853,6441,
#Partially deleted in new
chr6	83174436	83176135	chr6:83174436-83176135	0	-	83174436	83174436	8553170	2	51,174,	0,1525,
#Partially deleted in new
chr6	83181761	83193234	chr6:83181761-83193234	0	-	83181761	83188759	789624	6	170,134,68,185,137,56,	0,1083,5246,6852,9425,11417,
#Partially deleted in new
chr6	83182949	83193255	chr6:83182949-83193255	0	-	83188782	83191012	789624	5	29,68,181,206,77,	0,4058,5664,7859,10229,
#Partially deleted in new
chr6	83187024	83193936	chr6:83187024-83193936	0	-	83187024	83191012	789624	4	51,185,206,114,	0,1589,3784,6798,
#Deleted in new
chr6	83188502	83188645	chr6:83188502-83188645	0	-	83188609	83188645	789624	1	143,	0,
#Partially deleted in new
chr6	83188616	83193293	chr6:83188616-83193293	0	-	83188616	83191268	789624	4	182,206,137,115,	0,2192,2570,4562,
#Partially deleted in new
chr6	83188744	83193265	chr6:83188744-83193265	0	-	83188744	83191268	789624	4	54,206,137,161,	0,2064,2442,4360,
#Partially deleted in new
chr6	83190509	83193248	chr6:83190509-83193248	0	-	83190509	83190509	8553170	2	505,70,	0,2669,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	83193378	83198932	chr6:83193378-83198932	3	+	83194451	83196272	0	3	65,341,3338,	0,933,2216,
#Partially deleted in new
chr6	83210388	83431071	chr6:83210388-83431071	3	-	83211923	83430954	0	14	1706,99,174,143,106,114,98,110,104,162,76,150,134,195,	0,6109,13371,16946,18437,27328,29150,43240,104921,135784,141675,187978,197379,220488,
#Deleted in new
chr6	83392415	83393409	chr6:83392415-83393409	7	+	83392415	83392415	16724991	1	994,	0,
#Partially deleted in new
chr6	83512537	83525704	chr6:83512537-83525704	3	+	83523441	83524683	789624	2	157,2283,	0,10884,
#Partially deleted in new
chr6	83552879	83709691	chr6:83552879-83709691	1	-	83556152	83707927	789624	30	1406,103,105,84,112,31,135,135,84,84,72,78,264,108,168,15,119,110,28,6,71,42,107,112,94,103,76,143,160,366,	0,3263,7224,7984,22130,23143,27570,29342,38331,39575,40066,40302,40598,41494,48391,48705,52805,54819,57770,61977,64089,70421,88216,103874,106119,108622,109467,112559,154918,156446,
#Partially deleted in new
chr6	83552884	83709128	chr6:83552884-83709128	1	-	83556152	83707927	789624	30	1401,103,105,84,112,31,135,135,84,84,72,78,264,108,168,15,119,110,28,6,71,42,107,112,94,103,76,143,160,284,	0,3258,7219,7979,22125,23138,27565,29337,38326,39570,40061,40297,40593,41489,48386,48700,52800,54814,57765,61972,64084,70416,88211,103869,106114,108617,109462,112554,154913,155960,
#Partially deleted in new
chr6	83552884	83709128	chr6:83552884-83709128	1	-	83556152	83707927	789624	30	1401,103,105,84,112,31,150,135,84,84,72,78,264,108,168,15,119,110,28,6,71,42,107,112,94,103,76,143,160,284,	0,3258,7219,7979,22125,23138,27565,29337,38326,39570,40061,40297,40593,41489,48386,48700,52800,54814,57765,61972,64084,70416,88211,103869,106114,108617,109462,112554,154913,155960,
#Partially deleted in new
chr6	83552884	83709408	chr6:83552884-83709408	3	-	83556152	83707927	789624	30	1401,103,105,84,112,31,150,135,84,84,72,78,264,108,168,15,119,110,28,6,71,42,107,112,94,103,76,143,160,287,	0,3258,7219,7979,22125,23138,27565,29337,38326,39570,40061,40297,40593,41489,48386,48700,52800,54814,57765,61972,64084,70416,88211,103869,106114,108617,109462,112554,154913,156237,
#Partially deleted in new
chr6	83552890	83709392	chr6:83552890-83709392	1	-	83556152	83707927	789624	28	1395,103,105,84,112,31,150,135,84,72,78,264,108,168,15,119,110,28,71,42,107,112,94,103,76,143,160,67,	0,3252,7213,7973,22119,23132,27559,29331,38320,40055,40291,40587,41483,48380,48694,52794,54808,57759,64078,70410,88205,103863,106108,108611,109456,112548,154907,156435,
#Partially deleted in new
chr6	83552890	83709147	chr6:83552890-83709147	1	-	83556152	83707927	789624	30	1395,103,105,84,112,31,150,135,84,84,72,78,264,108,168,15,119,110,28,6,71,42,107,112,94,103,76,143,160,104,	0,3252,7213,7973,22119,23132,27559,29331,38320,39564,40055,40291,40587,41483,48380,48694,52794,54808,57759,61966,64078,70410,88205,103863,106108,108611,109456,112548,154907,156153,
#Partially deleted in new
chr6	83552894	83709395	chr6:83552894-83709395	0	-	83690389	83707927	789624	30	1391,103,105,84,112,31,150,135,84,72,264,108,168,15,119,110,28,71,42,107,112,94,103,76,143,126,96,214,160,70,	0,3248,7209,7969,22115,23128,27555,29327,38316,40051,40583,41479,48376,48690,52790,54804,57755,64074,70406,88201,103859,106104,108607,109452,112544,125883,133233,137328,154903,156431,
#Partially deleted in new
chr6	83554028	83709393	chr6:83554028-83709393	1	-	83556152	83707927	789624	20	257,103,105,84,112,31,150,135,119,110,28,71,107,112,94,103,76,143,160,68,	0,2114,6075,6835,20981,21994,26421,28193,51656,53670,56621,62940,87067,102725,104970,107473,108318,111410,153769,155297,
#Partially deleted in new
chr6	83554050	83592982	chr6:83554050-83592982	0	-	83554270	83592982	789624	8	235,105,84,112,31,150,135,37,	0,6053,6813,20959,21972,26399,28171,38895,
#Partially deleted in new
chr6	83554214	83708809	chr6:83554214-83708809	0	-	83662420	83707927	789624	29	71,103,105,84,112,31,135,135,84,84,72,78,264,108,168,15,119,110,28,6,71,42,107,112,94,103,76,160,145,	0,1928,5889,6649,20795,21808,26235,28007,36996,38240,38731,38967,39263,40159,47056,47370,51470,53484,56435,60642,62754,69086,86881,102539,104784,107287,108132,153583,154450,
#Partially deleted in new
chr6	83575180	83580506	chr6:83575180-83580506	0	-	83575180	83575180	8553170	3	441,31,57,	0,842,5269,
#Partially deleted in new
chr6	83576046	83707927	chr6:83576046-83707927	0	-	83576046	83707927	789624	19	7,150,135,84,84,72,78,119,110,28,71,42,107,112,94,103,76,143,130,	0,4403,6175,15164,16408,16899,17135,29638,31652,34603,40922,47254,65049,80707,82952,85455,86300,89392,131751,
#Partially deleted in new
chr6	83593593	83605803	chr6:83593593-83605803	0	-	83593593	83605803	789624	4	127,168,15,119,	0,7677,7991,12091,
#Deleted in new
chr6	83593635	83594528	chr6:83593635-83594528	0	-	83593635	83593635	8553170	2	106,155,	0,738,
#Partially deleted in new
chr6	83656831	83708879	chr6:83656831-83708879	0	-	83659078	83707927	789624	6	34,94,76,143,160,35,	0,2167,5515,8607,50966,52013,
#Partially deleted in new
chr6	83659087	83709019	chr6:83659087-83709019	0	-	83659087	83707927	789624	6	5,103,76,143,160,355,	0,2414,3259,6351,48710,49577,
#Partially deleted in new
chr6	83661501	83708189	chr6:83661501-83708189	0	-	83661501	83707927	789624	5	103,76,143,160,109,	0,845,3937,46296,46579,
#Partially deleted in new
chr6	83661506	83708414	chr6:83661506-83708414	0	-	83661506	83707927	789624	5	98,76,143,160,69,	0,840,3932,46291,46839,
#Partially deleted in new
chr6	83662346	83708718	chr6:83662346-83708718	0	-	83662346	83707927	789624	4	76,143,160,356,	0,3092,45451,46016,
#Partially deleted in new
chr6	83665513	83708713	chr6:83665513-83708713	0	-	83665513	83707927	789624	3	68,160,297,	0,42284,42903,
#Partially deleted in new
chr6	83686089	83709381	chr6:83686089-83709381	0	-	83690389	83707927	789624	4	134,214,160,56,	0,4133,21708,23236,
#Partially deleted in new
chr6	83686828	83708888	chr6:83686828-83708888	0	-	83690389	83707927	789624	5	11,53,214,160,44,	0,2764,3394,20969,22016,
#Partially deleted in new
chr6	83728054	83736525	chr6:83728054-83736525	3	+	83728054	83728054	8553170	2	97,254,	0,8217,
#Deleted in new
chr6	83853265	83857515	chr6:83853265-83857515	3	+	83853416	83857389	789624	4	246,79,65,274,	0,429,831,3976,
#Deleted in new
chr6	83853589	83857513	chr6:83853589-83857513	0	+	83853589	83853589	8553170	1	3924,	0,
#Deleted in new
chr6	83853591	83857515	chr6:83853591-83857515	1	+	83854096	83857389	789624	3	182,65,274,	0,505,3650,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr6	83859642	83967424	chr6:83859642-83967424	3	+	83859782	83959878	0	16	215,154,101,82,33,61,58,94,33,123,141,153,151,87,165,7601,	0,4532,33879,49366,54773,58362,59754,61439,62795,64827,74952,76581,80413,80872,95655,100181,
#Partially deleted in new
chr6	83859655	83910296	chr6:83859655-83910296	1	+	83864201	83910087	789624	5	202,154,101,82,229,	0,4519,33866,49353,50412,
#Partially deleted in new
chr6	83926268	83955375	chr6:83926268-83955375	0	+	83926268	83926268	8553170	7	63,91,141,153,151,87,78,	0,3151,8326,9955,13787,14246,29029,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	83983727	84007323	chr6:83983727-84007323	3	+	83983727	83983727	8553170	4	29,105,192,509,	0,4364,22614,23087,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	84019203	84026100	chr6:84019203-84026100	3	+	84019203	84019203	8553170	4	279,106,84,1831,	0,1680,3823,5066,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	84033755	84090881	chr6:84033755-84090881	3	+	84055318	84089481	789624	4	128,134,100,1791,	0,21556,29137,55335,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr6	84124240	84227596	chr6:84124240-84227596	1	-	84125069	84215866	789624	27	1036,135,99,142,635,213,105,164,127,106,113,141,228,134,262,292,82,192,117,31,116,68,184,147,62,115,17,	0,2137,22446,25321,28304,31057,36571,37505,38903,45087,47365,49807,50486,50973,60946,62091,69368,70643,76548,77496,79740,88716,91041,91535,93558,96816,103339,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr6	84124240	84227635	chr6:84124240-84227635	3	-	84125069	84226393	789624	27	1036,135,99,142,635,213,105,164,127,106,113,141,228,134,262,292,82,192,117,31,116,68,184,147,115,116,56,	0,2137,22446,25321,28304,31057,36571,37505,38903,45087,47365,49807,50486,50973,60946,62091,69368,70643,76548,77496,79740,88716,91041,91535,96816,102096,103339,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr6	84124240	84195030	chr6:84124240-84195030	0	-	84124240	84124240	8553170	18	1036,135,99,142,635,213,105,164,127,106,113,141,228,138,262,292,82,147,	0,2137,22446,25321,28304,31057,36571,37505,38903,45087,47365,49807,50486,50969,60946,62091,69368,70643,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr6	84124241	84227635	chr6:84124241-84227635	1	-	84125069	84215866	789624	26	1035,135,99,142,635,213,105,164,127,106,113,141,228,134,262,292,82,192,117,31,116,68,184,191,127,56,	0,2136,22445,25320,28303,31056,36570,37504,38902,45086,47364,49806,50485,50972,60945,62090,69367,70642,76547,77495,79739,88715,91040,91534,96803,103338,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	84124954	84155594	chr6:84124954-84155594	0	-	84124954	84124954	8553170	6	322,135,99,142,635,297,	0,1423,21732,24607,27590,30343,
#Partially deleted in new
chr6	84174771	84227608	chr6:84174771-84227608	0	-	84174771	84174771	8553170	15	183,138,262,292,82,192,117,31,116,68,184,147,115,116,29,	0,438,10415,11560,18837,20112,26017,26965,29209,38185,40510,41004,46285,51565,52808,
#Partially deleted in new
chr6	84215407	84227617	chr6:84215407-84227617	0	-	84219167	84226393	789624	6	58,147,112,115,116,38,	0,368,3695,5649,10929,12172,
#Partially deleted in new
chr6	84421027	84470904	chr6:84421027-84470904	1	-	84421027	84421027	8553170	4	215,65,110,114,	0,23359,42650,49763,
#Partially deleted in new
chr6	84421030	84556152	chr6:84421030-84556152	0	-	84421030	84421030	8553170	3	212,65,134,	0,23356,134988,
#Partially deleted in new
chr6	84421047	84474929	chr6:84421047-84474929	3	-	84421047	84421047	789624	4	195,65,114,103,	0,23339,49743,53779,
#Deleted in new
chr6	84429583	84430802	chr6:84429583-84430802	7	-	84429583	84429583	16724991	1	1219,	0,
#Deleted in new
chr6	84687350	84688747	chr6:84687350-84688747	0	-	84687350	84687350	8553170	2	328,167,	0,1230,
#Partially deleted in new
chr6	84687372	84763453	chr6:84687372-84763453	1	-	84688593	84762566	789624	9	306,87,95,65,168,172,102,205,30,	0,1208,51124,56888,60547,69325,72882,75171,76051,
#Partially deleted in new
chr6	84687711	84709503	chr6:84687711-84709503	0	+	84687711	84687711	8553170	3	101,199,236,	0,7198,21556,
#Deleted in new
chr6	84689291	84689429	chr6:84689291-84689429	7	-	84689291	84689291	16724991	1	138,	0,
#Partially deleted in new
chr6	84689424	84709504	chr6:84689424-84709504	0	+	84689424	84689424	789624	3	137,199,237,	0,5485,19843,
#Partially deleted in new
chr6	84689448	84709493	chr6:84689448-84709493	0	+	84689448	84689448	8553170	3	288,199,226,	0,5461,19819,
#Partially deleted in new
chr6	84689459	84709446	chr6:84689459-84709446	2	+	84689459	84689459	8553170	3	102,309,179,	0,17846,19808,
#Partially deleted in new
chr6	84689460	84709493	chr6:84689460-84709493	0	+	84689460	84689460	8553170	3	101,337,226,	0,2829,19807,
#Partially deleted in new
chr6	84689460	84707614	chr6:84689460-84707614	1	+	84689460	84689460	8553170	3	101,199,462,	0,5449,17692,
#Partially deleted in new
chr6	84689504	84709578	chr6:84689504-84709578	1	+	84689504	84689504	789624	3	57,53,311,	0,5551,19763,
#Partially deleted in new
chr6	84694986	84709527	chr6:84694986-84709527	1	+	84694986	84694986	8553170	2	122,260,	0,14281,
#Partially deleted in new
chr6	84697511	84709504	chr6:84697511-84709504	0	+	84697511	84697511	8553170	3	60,309,237,	0,9794,11756,
#Partially deleted in new
chr6	84732601	84764519	chr6:84732601-84764519	3	-	84736684	84764181	789624	8	4808,95,65,168,172,102,205,630,	0,5895,11659,15318,24096,27653,29942,31288,
#Deleted in new
chr6	84741066	84741802	chr6:84741066-84741802	0	-	84741066	84741066	8553170	1	736,	0,
#Partially deleted in new
chr6	84742023	84763448	chr6:84742023-84763448	0	-	84742023	84742023	8553170	7	525,65,168,172,102,205,25,	0,2237,5896,14674,18231,20520,21400,
#Partially deleted in new
chr6	84744260	84763453	chr6:84744260-84763453	0	-	84744260	84762566	789624	6	65,168,172,102,205,30,	0,3659,12437,15994,18283,19163,
#Deleted in new
chr6	84760282	84763355	chr6:84760282-84763355	0	-	84760282	84762566	789624	3	74,205,438,	0,2261,2635,
#Partially deleted in new
chr6	84966396	84966625	chr6:84966396-84966625	7	-	84966396	84966396	16724991	1	229,	0,
#Partially deleted in new
chr6	85155666	85167749	chr6:85155666-85167749	7	+	85155666	85155666	16724991	6	154,291,49,102,354,52,	0,1012,4296,6032,11512,12031,
#Deleted in new
chr6	85257327	85257694	chr6:85257327-85257694	7	+	85257327	85257327	16724991	1	367,	0,
#Partially deleted in new
chr6	85286075	85290849	chr6:85286075-85290849	7	+	85286075	85286075	16724991	5	91,562,632,88,217,	0,162,968,4170,4557,
#Deleted in new
chr6	85287788	85289007	chr6:85287788-85289007	7	+	85287788	85287788	16724991	1	1219,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	85387218	85390186	chr6:85387218-85390186	3	-	85387218	85387218	789624	2	2339,174,	0,2794,
#Deleted in new
chr6	85426656	85427125	chr6:85426656-85427125	7	-	85426656	85426656	16724991	1	469,	0,
#Deleted in new
chr6	85427452	85427966	chr6:85427452-85427966	7	-	85427452	85427452	16724991	1	514,	0,
#Partially deleted in new
chr6	85449583	85495791	chr6:85449583-85495791	1	+	85450139	85494004	0	8	895,223,189,198,155,106,201,1951,	0,17476,21653,35651,37751,39910,42393,44257,
#Partially deleted in new
chr6	85450090	85495778	chr6:85450090-85495778	3	+	85450139	85494004	0	9	388,223,189,198,155,106,150,201,1938,	0,16969,21146,35144,37244,39403,40417,41886,43750,
#Partially deleted in new
chr6	85450090	85471599	chr6:85450090-85471599	1	+	85450139	85471469	789624	3	388,223,363,	0,16969,21146,
#Partially deleted in new
chr6	85471380	85492161	chr6:85471380-85492161	0	+	85471380	85492161	789624	5	45,198,155,106,185,	0,13854,15954,18113,20596,
#Partially deleted in new
chr6	85485396	85491325	chr6:85485396-85491325	0	+	85485396	85491126	789624	5	36,155,106,150,291,	0,1938,4097,5111,5638,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	85498440	85499058	chr6:85498440-85499058	3	-	85498440	85498440	8553170	1	618,	0,
#Partially deleted in new
chr6	85505495	85593913	chr6:85505495-85593913	1	-	85505966	85593718	0	26	510,57,92,96,165,124,120,41,112,101,84,202,133,59,125,156,115,81,45,76,157,85,79,77,121,335,	0,1737,2472,8304,8574,9010,12260,12512,20630,22766,24696,28103,31296,36489,37686,38109,41616,41821,42010,42805,44227,52480,66641,66802,68762,88083,
#Partially deleted in new
chr6	85505498	85593895	chr6:85505498-85593895	3	-	85505966	85593718	0	29	507,57,92,96,165,124,120,41,112,101,84,202,133,27,59,125,156,115,81,45,76,157,85,88,44,79,77,121,317,	0,1734,2469,8301,8571,9007,12257,12509,20627,22763,24693,28100,31293,33339,36486,37683,38106,41613,41818,42007,42802,44224,52477,59833,62035,66638,66799,68759,88080,
#Partially deleted in new
chr6	85505792	85593805	chr6:85505792-85593805	1	-	85505966	85593718	789624	21	213,57,92,96,165,124,120,41,156,115,81,45,76,157,85,88,44,79,77,121,227,	0,1440,2175,8007,8277,8713,11963,12215,37812,41319,41524,41713,42508,43930,52183,59539,61741,66344,66505,68465,87786,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	85505797	85508457	chr6:85505797-85508457	0	-	85505797	85505797	8553170	3	208,57,490,	0,1435,2170,
#Partially deleted in new
chr6	85505797	85594156	chr6:85505797-85594156	1	-	85505966	85574362	0	29	208,57,92,96,165,124,120,41,112,101,84,202,133,27,59,125,156,115,81,45,76,157,85,88,44,79,77,121,323,	0,1435,2170,8002,8272,8708,11958,12210,20328,22464,24394,27801,30994,33040,36187,37384,37807,41314,41519,41708,42503,43925,52178,59534,61736,66339,66500,68460,88036,
#Partially deleted in new
chr6	85505801	85593850	chr6:85505801-85593850	1	-	85505966	85593718	0	28	204,57,92,96,165,124,120,41,112,101,84,202,133,59,125,156,115,81,45,76,157,85,88,44,79,77,121,272,	0,1431,2166,7998,8268,8704,11954,12206,20324,22460,24390,27797,30990,36183,37380,37803,41310,41515,41704,42499,43921,52174,59530,61732,66335,66496,68456,87777,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr6	85505805	85568483	chr6:85505805-85568483	0	-	85505805	85505805	8553170	25	200,57,92,96,165,124,120,41,112,101,84,202,133,27,59,125,156,115,81,45,76,157,85,88,950,	0,1427,2162,7994,8264,8700,11950,12202,20320,22456,24386,27793,30986,33032,36179,37376,37799,41306,41511,41700,42495,43917,52170,59526,61728,
#Partially deleted in new
chr6	85507207	85514613	chr6:85507207-85514613	0	-	85507214	85514613	789624	5	82,92,96,165,108,	0,760,6592,6862,7298,
#Partially deleted in new
chr6	85508006	85528351	chr6:85508006-85528351	0	-	85508006	85528351	789624	7	53,96,124,120,41,112,90,	0,5793,6499,9749,10001,18119,20255,
#Partially deleted in new
chr6	85513856	85593785	chr6:85513856-85593785	0	-	85549876	85593718	789624	25	39,165,124,120,41,112,101,84,202,133,27,59,125,156,115,81,45,76,157,88,44,79,77,121,207,	0,213,649,3899,4151,12269,14405,16335,19742,22935,24981,28128,29325,29748,33255,33460,33649,34444,35866,51475,53677,58280,58441,60401,79722,
#Partially deleted in new
chr6	85517568	85533680	chr6:85517568-85533680	0	-	85517568	85517568	8553170	6	307,41,112,101,84,82,	0,439,8557,10693,12623,16030,
#Partially deleted in new
chr6	85528263	85543787	chr6:85528263-85543787	0	-	85528263	85528263	8553170	7	99,84,202,133,59,125,183,	0,1928,5335,8528,13721,14918,15341,
#Partially deleted in new
chr6	85533674	85537024	chr6:85533674-85537024	0	-	85533674	85533674	8553170	2	126,233,	0,3117,
#Partially deleted in new
chr6	85547401	85549758	chr6:85547401-85549758	0	-	85547401	85547401	8553170	3	149,76,36,	0,899,2321,
#Partially deleted in new
chr6	85549788	85593885	chr6:85549788-85593885	0	-	85549788	85574362	789624	6	91,85,79,77,121,52,	0,8187,22348,22509,24469,44045,
#Partially deleted in new
chr6	85549800	85593871	chr6:85549800-85593871	0	-	85549800	85593718	789624	8	79,85,88,44,79,74,121,293,	0,8175,15531,17733,22336,22497,24457,43778,
#Partially deleted in new
chr6	85549823	85593857	chr6:85549823-85593857	0	-	85565404	85574362	789624	7	56,85,88,79,77,121,24,	0,8152,15508,22313,22474,24434,44010,
#Partially deleted in new
chr6	85557977	85615234	chr6:85557977-85615234	3	-	85612881	85615234	789624	8	83,88,44,79,77,121,89,254,	0,7354,9556,14159,14320,16280,54854,57003,
#Partially deleted in new
chr6	85607784	85642922	chr6:85607784-85642922	1	-	85612881	85640301	789624	11	5139,367,122,150,206,136,177,114,108,119,126,	0,7196,11033,11483,14697,16192,29182,29458,32436,32661,35012,
#Partially deleted in new
chr6	85608328	85642991	chr6:85608328-85642991	1	-	85612881	85641439	0	12	4595,367,122,150,206,136,177,114,108,119,160,195,	0,6652,10489,10939,14153,15648,28638,28914,31892,32117,32963,34468,
#Partially deleted in new
chr6	85614105	85643285	chr6:85614105-85643285	3	-	85614755	85641439	0	11	1242,122,150,206,136,177,114,108,119,160,489,	0,4712,5162,8376,9871,22861,23137,26115,26340,27186,28691,
#Partially deleted in new
chr6	85637077	85643792	chr6:85637077-85643792	0	-	85637077	85641439	789624	6	66,114,108,119,160,43,	0,165,3143,3368,4214,6672,
#Partially deleted in new
chr6	85659891	85660606	chr6:85659891-85660606	7	-	85659891	85659891	16724991	1	715,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	85660949	85678235	chr6:85660949-85678235	1	-	85660949	85660949	8553170	6	406,53,144,69,79,100,	0,2724,5054,16474,17004,17186,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	85660949	85678235	chr6:85660949-85678235	0	-	85660949	85660949	8553170	7	185,53,144,69,81,79,100,	0,2724,5054,16474,16845,17004,17186,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	85660949	85678748	chr6:85660949-85678748	1	-	85660949	85660949	8553170	9	185,53,144,99,69,81,79,53,55,	0,2724,5054,16143,16474,16845,17004,17186,17744,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	85660991	85678733	chr6:85660991-85678733	1	-	85660991	85660991	8553170	7	143,40,144,69,79,53,40,	0,2695,5012,16432,16962,17144,17702,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	85665559	85678736	chr6:85665559-85678736	3	-	85665559	85665559	8553170	4	588,69,53,43,	0,11864,12576,13134,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	85665641	85678436	chr6:85665641-85678436	0	-	85665641	85665641	8553170	3	506,79,301,	0,12312,12494,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	85665771	85678431	chr6:85665771-85678431	0	-	85665771	85665771	8553170	2	376,296,	0,12364,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	85665851	85678720	chr6:85665851-85678720	1	-	85665851	85665851	8553170	4	296,69,79,585,	0,11572,12102,12284,
#Deleted in new
chr6	85676989	85678736	chr6:85676989-85678736	1	-	85676989	85676989	8553170	5	202,69,81,79,601,	0,434,805,964,1146,
#Deleted in new
chr6	85677081	85677993	chr6:85677081-85677993	0	-	85677081	85677081	8553170	2	110,570,	0,342,
#Deleted in new
chr6	85677081	85678652	chr6:85677081-85678652	0	-	85677081	85677081	8553170	3	110,69,517,	0,342,1054,
#Deleted in new
chr6	85677082	85678405	chr6:85677082-85678405	1	-	85677082	85677082	8553170	5	109,69,105,79,270,	0,341,712,871,1053,
#Deleted in new
chr6	85677083	85678733	chr6:85677083-85678733	0	-	85677083	85677083	789624	6	108,69,81,79,53,40,	0,340,711,870,1052,1610,
#Deleted in new
chr6	85677083	85678722	chr6:85677083-85678722	0	-	85677083	85677083	8553170	4	108,69,238,587,	0,340,711,1052,
#Deleted in new
chr6	85677083	85678520	chr6:85677083-85678520	0	-	85677083	85677083	8553170	4	108,69,79,385,	0,340,870,1052,
#Deleted in new
chr6	85677083	85678573	chr6:85677083-85678573	0	-	85677083	85677083	8553170	4	108,69,53,171,	0,340,1052,1319,
#Deleted in new
chr6	85677083	85678436	chr6:85677083-85678436	1	-	85677083	85677083	8553170	5	108,69,74,79,301,	0,340,711,870,1052,
#Deleted in new
chr6	85677083	85678205	chr6:85677083-85678205	0	-	85677083	85677083	8553170	3	108,79,70,	0,870,1052,
#Deleted in new
chr6	85677095	85678413	chr6:85677095-85678413	0	-	85677095	85677095	8553170	2	96,278,	0,1040,
#Deleted in new
chr6	85677104	85678413	chr6:85677104-85678413	1	-	85677104	85677104	8553170	5	87,69,85,79,278,	0,319,686,849,1031,
#Deleted in new
chr6	85677127	85678733	chr6:85677127-85678733	0	-	85677127	85677127	8553170	3	905,53,40,	0,1008,1566,
#Deleted in new
chr6	85677328	85678199	chr6:85677328-85678199	0	-	85677328	85677328	8553170	4	164,81,79,64,	0,466,625,807,
#Deleted in new
chr6	85677468	85678259	chr6:85677468-85678259	0	-	85677468	85677468	8553170	2	24,465,	0,326,
#Deleted in new
chr6	85677588	85677658	chr6:85677588-85677658	3	-	85677588	85677588	789624	1	70,	0,
#Partially deleted in new
chr6	85731370	85732011	chr6:85731370-85732011	7	+	85731370	85731370	16724991	1	641,	0,
#Partially deleted in new
chr6	85735743	85735921	chr6:85735743-85735921	7	-	85735743	85735743	16724991	1	178,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	85751580	85751753	chr6:85751580-85751753	3	+	85751580	85751580	8553170	1	173,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	85777638	85777755	chr6:85777638-85777755	3	-	85777638	85777638	8553170	1	117,	0,
#Partially deleted in new
chr6	85868952	85869464	chr6:85868952-85869464	7	+	85868952	85868952	16724991	1	512,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	85993020	85993159	chr6:85993020-85993159	3	-	85993020	85993020	8553170	1	139,	0,
#Partially deleted in new
chr6	86086414	86087134	chr6:86086414-86087134	7	-	86086414	86086414	16724991	1	720,	0,
#Deleted in new
chr6	86170446	86171018	chr6:86170446-86171018	7	-	86170446	86170446	16724991	1	572,	0,
#Deleted in new
chr6	86214236	86214576	chr6:86214236-86214576	7	-	86214236	86214236	16724991	1	340,	0,
#Deleted in new
chr6	86432243	86432669	chr6:86432243-86432669	7	+	86432243	86432243	16724991	1	426,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	86435847	86436138	chr6:86435847-86436138	3	+	86435847	86435847	8553170	1	291,	0,
#Deleted in new
chr6	86729707	86730108	chr6:86729707-86730108	7	-	86729707	86729707	16724991	1	401,	0,
#Deleted in new
chr6	86768521	86768932	chr6:86768521-86768932	7	-	86768521	86768521	16724991	1	411,	0,
#Deleted in new
chr6	86897117	86897421	chr6:86897117-86897421	7	+	86897117	86897117	16724991	1	304,	0,
#Deleted in new
chr6	86897546	86897683	chr6:86897546-86897683	7	+	86897546	86897546	16724991	1	137,	0,
#Partially deleted in new
chr6	86937305	87016683	chr6:86937305-87016683	3	+	87015334	87016432	789624	2	518,1534,	0,77844,
#Deleted in new
chr6	86970465	86971193	chr6:86970465-86971193	7	+	86970465	86970465	16724991	1	728,	0,
#Deleted in new
chr6	87000044	87000291	chr6:87000044-87000291	7	-	87000044	87000044	16724991	1	247,	0,
#Partially deleted in new
chr6	87070155	87070461	chr6:87070155-87070461	7	-	87070155	87070155	16724991	1	306,	0,
#Deleted in new
chr6	87083232	87083536	chr6:87083232-87083536	3	+	87083232	87083232	8553170	1	304,	0,
#Partially deleted in new
chr6	87085497	87095406	chr6:87085497-87095406	3	-	87085755	87088200	0	4	336,185,95,394,	0,752,2615,9515,
#Partially deleted in new
chr6	87085502	87095059	chr6:87085502-87095059	1	-	87085755	87088181	789624	5	331,185,114,52,47,	0,747,2591,9326,9510,
#Partially deleted in new
chr6	87085789	87095104	chr6:87085789-87095104	1	-	87086216	87088200	789624	3	645,95,92,	0,2323,9223,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	87086335	87095106	chr6:87086335-87095106	0	-	87086335	87088200	789624	4	99,95,299,94,	0,1777,2533,8677,
#Partially deleted in new
chr6	87087698	87095104	chr6:87087698-87095104	0	-	87087698	87087698	8553170	2	509,92,	0,7314,
#Deleted in new
chr6	87121692	87122688	chr6:87121692-87122688	7	-	87121692	87121692	16724991	1	996,	0,
#Deleted in new
chr6	87151158	87155285	chr6:87151158-87155285	3	-	87151158	87151158	8553170	1	4127,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	87152832	87170364	chr6:87152832-87170364	1	+	87155591	87169706	789624	4	37,171,197,691,	0,2358,2730,16841,
#Partially deleted in new
chr6	87155548	87264196	chr6:87155548-87264196	3	+	87155591	87261801	0	8	211,155,79,136,203,137,142,9547,	0,60354,60750,63047,77776,87926,89954,99101,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	87155564	87223936	chr6:87155564-87223936	0	+	87155564	87155564	8553170	5	195,155,79,136,1167,	0,60338,60734,63031,67205,
#Partially deleted in new
chr6	87155575	87243567	chr6:87155575-87243567	0	+	87155591	87243567	789624	2	184,93,	0,87899,
#Partially deleted in new
chr6	87155580	87261920	chr6:87155580-87261920	1	+	87155591	87261801	789624	8	179,155,79,136,188,137,142,7271,	0,60322,60718,63015,77759,87894,89922,99069,
#Partially deleted in new
chr6	87155620	87260645	chr6:87155620-87260645	0	+	87155620	87260645	789624	3	139,60,571,	0,60282,104454,
#Deleted in new
chr6	87173367	87174303	chr6:87173367-87174303	7	-	87173367	87173367	16724991	1	936,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	87213713	87222904	chr6:87213713-87222904	0	+	87213713	87213713	8553170	6	152,145,155,79,136,135,	0,1284,2189,2585,4882,9056,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	87213737	87222867	chr6:87213737-87222867	0	+	87213737	87213737	8553170	5	128,155,79,136,98,	0,2165,2561,4858,9032,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	87233523	87255049	chr6:87233523-87255049	0	+	87233523	87249425	789624	5	4,137,142,155,400,	0,9951,11979,15788,21126,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	87282977	87329278	chr6:87282977-87329278	3	-	87284240	87284912	789624	3	1962,178,141,	0,39888,46160,
#Partially deleted in new
chr6	87284424	87291988	chr6:87284424-87291988	0	-	87284424	87284912	789624	2	515,56,	0,7508,
#Deleted in new
chr6	87298771	87300447	chr6:87298771-87300447	7	+	87298771	87298771	16724991	1	1676,	0,
#Partially deleted in new
chr6	87322582	87341759	chr6:87322582-87341759	1	+	87337031	87340274	789624	4	50,259,158,1644,	0,8109,14426,17533,
#Partially deleted in new
chr6	87322587	87342328	chr6:87322587-87342328	3	+	87337031	87340274	789624	4	45,21,158,2213,	0,8104,14421,17528,
#Partially deleted in new
chr6	87322592	87342322	chr6:87322592-87342322	1	+	87337031	87340274	789624	3	40,158,2207,	0,14416,17523,
#Partially deleted in new
chr6	87322608	87341778	chr6:87322608-87341778	1	+	87337031	87341321	789624	3	24,158,553,	0,14400,18617,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	87322619	87399599	chr6:87322619-87399599	0	+	87322619	87322619	8553170	6	13,249,56,118,135,166,	0,52842,69160,70105,75623,76814,
#Partially deleted in new
chr6	87322631	87340504	chr6:87322631-87340504	1	+	87337031	87340274	789624	4	247,21,158,389,	0,8060,14377,17484,
#Partially deleted in new
chr6	87344848	87365463	chr6:87344848-87365463	3	+	87345099	87365396	789624	5	399,95,108,203,503,	0,3963,5545,11452,20112,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	87347501	87365462	chr6:87347501-87365462	1	+	87356339	87365396	789624	3	1405,203,502,	0,8799,17459,
#Partially deleted in new
chr6	87356143	87365318	chr6:87356143-87365318	0	+	87356143	87356143	8553170	2	360,358,	0,8817,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	87356830	87358605	chr6:87356830-87358605	3	+	87356830	87356830	8553170	1	1775,	0,
#Partially deleted in new
chr6	87359092	87365463	chr6:87359092-87365463	0	+	87359092	87359092	8553170	2	109,503,	0,5868,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	87374687	87378602	chr6:87374687-87378602	0	+	87374687	87374687	8553170	1	3915,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	87397121	87399749	chr6:87397121-87399749	0	+	87397121	87397121	789624	2	1256,312,	0,2316,
#Partially deleted in new
chr6	87407982	87464465	chr6:87407982-87464465	3	+	87409839	87464250	789624	13	107,113,84,91,189,159,209,120,199,141,194,144,446,	0,1852,2602,5827,7703,8686,10225,18543,20643,23050,26877,53039,56037,
#Partially deleted in new
chr6	87408011	87496140	chr6:87408011-87496140	3	+	87409839	87464250	8553170	16	78,113,84,91,189,159,209,120,199,141,194,144,291,178,45,66,	0,1823,2573,5798,7674,8657,10196,18514,20614,23021,26848,53010,56008,69350,80046,88063,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	87408012	87436057	chr6:87408012-87436057	0	+	87408012	87408012	8553170	11	77,113,84,91,189,159,209,120,199,141,1198,	0,1822,2572,5797,7673,8656,10195,18513,20613,23020,26847,
#Partially deleted in new
chr6	87408025	87464460	chr6:87408025-87464460	0	+	87409839	87415567	789624	13	64,109,84,91,312,159,209,120,199,141,194,144,441,	0,1813,2559,5784,7537,8643,10182,18500,20600,23007,26834,52996,55994,
#Partially deleted in new
chr6	87408488	87418331	chr6:87408488-87418331	0	+	87409839	87418331	789624	7	290,113,84,91,189,159,124,	0,1346,2096,5321,7197,8180,9719,
#Deleted in new
chr6	87425794	87426088	chr6:87425794-87426088	7	-	87425794	87425794	16724991	1	294,	0,
#Partially deleted in new
chr6	87436690	87511634	chr6:87436690-87511634	0	+	87436690	87436690	8553170	11	120,144,291,178,160,153,67,181,177,135,236,	0,24331,27329,40671,63817,64467,69691,70190,71729,72350,74708,
#Partially deleted in new
chr6	87436732	87477435	chr6:87436732-87477435	0	+	87436732	87436732	8553170	4	74,144,291,74,	0,24289,27287,40629,
#Deleted in new
chr6	87441164	87442146	chr6:87441164-87442146	7	-	87441164	87441164	16724991	1	982,	0,
#Deleted in new
chr6	87444394	87445175	chr6:87444394-87445175	7	-	87444394	87444394	16724991	1	781,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	87470622	87511803	chr6:87470622-87511803	0	+	87470622	87470622	8553170	7	91,178,160,153,177,135,405,	0,6739,29885,30535,37797,38418,40776,
#Partially deleted in new
chr6	87472924	87512330	chr6:87472924-87512330	1	+	87473003	87511526	789624	7	95,178,160,153,67,135,932,	0,4437,27583,28233,33457,36116,38474,
#Partially deleted in new
chr6	87472924	87512330	chr6:87472924-87512330	1	+	87473003	87509103	789624	6	95,178,160,153,135,932,	0,4437,27583,28233,36116,38474,
#Partially deleted in new
chr6	87472976	87512336	chr6:87472976-87512336	3	+	87473003	87511526	789624	8	43,178,160,153,67,177,135,938,	0,4385,27531,28181,33405,35443,36064,38422,
#Partially deleted in new
chr6	87477361	87511802	chr6:87477361-87511802	1	+	87477402	87508540	789624	7	178,160,153,18,158,135,404,	0,23146,23796,31058,31077,31679,34037,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	87488444	87488552	chr6:87488444-87488552	3	+	87488444	87488444	8553170	1	108,	0,
#Partially deleted in new
chr6	87514377	87590003	chr6:87514377-87590003	3	-	87514412	87589957	789624	20	122,64,75,96,110,68,125,77,61,96,107,159,77,84,56,98,84,103,74,82,	0,579,2428,3791,4252,4446,5205,5802,7086,10179,15164,16406,27540,31238,34213,41030,48324,49752,55139,75544,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	87514406	87516880	chr6:87514406-87516880	0	-	87514406	87514406	8553170	4	93,64,114,75,	0,550,1426,2399,
#Deleted in new
chr6	87518475	87519231	chr6:87518475-87519231	0	-	87518475	87518475	8553170	2	264,408,	0,348,
#Partially deleted in new
chr6	87590066	87667453	chr6:87590066-87667453	1	+	87607674	87667123	0	19	126,55,145,105,152,134,160,114,134,64,117,80,134,77,98,142,117,80,436,	0,4286,13317,15850,17606,19029,22022,26247,31287,31883,44778,46340,63049,66839,67854,72936,74676,75687,76951,
#Partially deleted in new
chr6	87590120	87667451	chr6:87590120-87667451	1	+	87590168	87667123	0	20	72,55,98,145,105,152,134,160,114,134,64,117,80,134,77,98,142,117,80,434,	0,4232,11663,13263,15796,17552,18975,21968,26193,31233,31829,44724,46286,62995,66785,67800,72882,74622,75633,76897,
#Partially deleted in new
chr6	87590129	87595437	chr6:87590129-87595437	0	+	87590129	87590129	8553170	4	63,55,87,266,	0,4223,4397,5042,
#Partially deleted in new
chr6	87590134	87667451	chr6:87590134-87667451	3	+	87590168	87667123	0	20	58,55,98,145,105,152,134,160,114,134,64,117,80,134,80,98,142,117,80,434,	0,4218,11649,13249,15782,17538,18961,21954,26179,31219,31815,44710,46272,62981,66768,67786,72868,74608,75619,76883,
#Deleted in new
chr6	87607672	87609531	chr6:87607672-87609531	0	+	87607672	87607672	8553170	2	152,436,	0,1423,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	87650929	87653214	chr6:87650929-87653214	0	+	87653116	87653214	789624	2	463,99,	0,2186,
#Partially deleted in new
chr6	87675071	87702209	chr6:87675071-87702209	3	-	87675596	87701684	789624	5	536,72,150,144,760,	0,788,2746,6548,26378,
#Deleted in new
chr6	87700509	87701525	chr6:87700509-87701525	0	-	87700509	87700509	8553170	2	337,76,	0,940,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	87720914	87721018	chr6:87720914-87721018	3	+	87720914	87720914	8553170	1	104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	87845649	87845947	chr6:87845649-87845947	3	+	87845649	87845649	8553170	1	298,	0,
#Partially deleted in new
chr6	87891423	87891869	chr6:87891423-87891869	7	+	87891423	87891423	16724991	1	446,	0,
#Partially deleted in new
chr6	88047788	88066832	chr6:88047788-88066832	3	+	88047905	88066335	789624	7	325,57,102,107,136,121,651,	0,6157,9823,10927,11664,16310,18393,
#Partially deleted in new
chr6	88059452	88066832	chr6:88059452-88066832	0	+	88059452	88059452	8553170	3	136,140,651,	0,4627,6729,
#Partially deleted in new
chr6	88059452	88066832	chr6:88059452-88066832	0	+	88059452	88059452	8553170	3	136,192,651,	0,4833,6729,
#Partially deleted in new
chr6	88139863	88166359	chr6:88139863-88166359	3	-	88143855	88145274	0	2	5474,557,	0,25939,
#Partially deleted in new
chr6	88139875	88164343	chr6:88139875-88164343	1	-	88143855	88145274	0	2	5462,87,	0,24381,
#Deleted in new
chr6	88143243	88145365	chr6:88143243-88145365	1	-	88143855	88145274	0	1	2122,	0,
#Deleted in new
chr6	88143855	88145274	chr6:88143855-88145274	1	-	88144996	88145274	789624	2	1149,103,	0,1316,
#Partially deleted in new
chr6	88143855	88163024	chr6:88143855-88163024	1	-	88143855	88145274	0	2	1482,68,	0,19101,
#Deleted in new
chr6	88143855	88145274	chr6:88143855-88145274	1	-	88143855	88145274	0	2	1258,62,	0,1357,
#Partially deleted in new
chr6	88145040	88165915	chr6:88145040-88165915	0	-	88145040	88145274	789624	4	297,143,38,113,	0,2623,19216,20762,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	88172260	88175762	chr6:88172260-88175762	3	+	88172260	88172260	8553170	1	3502,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	88177803	88420970	chr6:88177803-88420970	3	-	88177803	88177803	8553170	7	631,136,155,376,150,146,27,	0,103010,121057,126041,137780,146196,243140,
#Deleted in new
chr6	88265157	88265511	chr6:88265157-88265511	7	+	88265157	88265157	16724991	1	354,	0,
#Deleted in new
chr6	88275881	88276989	chr6:88275881-88276989	7	-	88275881	88275881	16724991	1	1108,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	88298949	88421033	chr6:88298949-88421033	0	-	88298949	88298949	8553170	3	69,146,90,	0,25050,121994,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr6	88610271	88963721	chr6:88610271-88963721	3	-	88612718	88963409	0	16	2611,124,67,101,69,165,72,136,102,110,241,76,89,104,110,376,	0,4000,68081,159502,191292,234085,239483,243357,280223,281534,294443,296093,318713,318892,330799,353074,
#Partially deleted in new
chr6	88612718	88963409	chr6:88612718-88963409	1	-	88612718	88963409	0	15	164,124,67,101,165,72,136,102,110,241,76,89,104,110,64,	0,1553,65634,157055,231638,237036,240910,277776,279087,291996,293646,316266,316445,328352,350627,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	88677993	88963561	chr6:88677993-88963561	0	-	88677993	88677993	8553170	14	426,101,69,165,72,136,102,110,241,76,89,104,110,216,	0,91780,123570,166363,171761,175635,212501,213812,226721,228371,250991,251170,263077,285352,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	88714241	88714430	chr6:88714241-88714430	3	-	88714241	88714241	8553170	1	189,	0,
#Partially deleted in new
chr6	88769769	88963409	chr6:88769769-88963409	1	-	88769769	88963409	0	12	105,165,72,136,102,110,241,76,89,104,110,64,	0,74587,79985,83859,120725,122036,134945,136595,159215,159394,171301,193576,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	88964526	88966587	chr6:88964526-88966587	3	+	88964526	88964526	8553170	1	2061,	0,
#Partially deleted in new
chr6	89001547	89001814	chr6:89001547-89001814	7	+	89001547	89001547	16724991	1	267,	0,
#Partially deleted in new
chr6	89059627	89060109	chr6:89059627-89060109	7	+	89059627	89059627	16724991	1	482,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	89063499	89063690	chr6:89063499-89063690	3	-	89063499	89063499	8553170	1	191,	0,
#Deleted in new
chr6	89080163	89080667	chr6:89080163-89080667	3	-	89080163	89080163	8553170	1	504,	0,
#Partially deleted in new
chr6	89080750	89084345	chr6:89080750-89084345	1	+	89083767	89084196	789624	2	223,593,	0,3002,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	89080777	89085160	chr6:89080777-89085160	3	+	89080894	89084196	789624	2	657,1408,	0,2975,
#Partially deleted in new
chr6	89081835	89084197	chr6:89081835-89084197	1	+	89083767	89084196	789624	2	900,445,	0,1917,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	89090945	89091242	chr6:89090945-89091242	3	+	89090945	89090945	8553170	1	297,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	89095958	89118081	chr6:89095958-89118081	3	-	89098577	89117887	789624	5	2989,142,104,105,259,	0,9160,9468,11195,21864,
#Partially deleted in new
chr6	89098852	89105816	chr6:89098852-89105816	0	-	89098852	89098852	8553170	2	95,698,	0,6266,
#Partially deleted in new
chr6	89098936	89105966	chr6:89098936-89105966	0	-	89098936	89098936	8553170	3	11,142,540,	0,6182,6490,
#Partially deleted in new
chr6	89105144	89118005	chr6:89105144-89118005	0	-	89106963	89117887	789624	4	116,112,347,183,	0,282,1536,12678,
#Partially deleted in new
chr6	89105480	89117975	chr6:89105480-89117975	0	-	89106963	89117887	789624	3	70,344,153,	0,1200,12342,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	89146049	89165565	chr6:89146049-89165565	3	+	89146144	89162263	789624	7	560,149,143,155,136,108,3457,	0,3215,6993,8698,12275,15733,16059,
#Partially deleted in new
chr6	89177500	89217433	chr6:89177500-89217433	3	-	89178769	89217322	789624	10	1563,197,153,141,83,224,68,107,51,233,	0,2791,4404,7809,12664,20519,21861,23658,25934,39700,
#Partially deleted in new
chr6	89177507	89217777	chr6:89177507-89217777	1	-	89178769	89217322	789624	9	1556,197,153,141,83,224,68,107,577,	0,2784,4397,7802,12657,20512,21854,23651,39693,
#Partially deleted in new
chr6	89177507	89217777	chr6:89177507-89217777	1	-	89178769	89201177	789624	11	1556,197,153,141,83,224,68,107,54,99,577,	0,2784,4397,7802,12657,20512,21854,23651,25927,27088,39693,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	89177507	89221449	chr6:89177507-89221449	1	-	89178769	89201177	789624	11	1556,197,153,141,83,224,68,107,54,99,175,	0,2784,4397,7802,12657,20512,21854,23651,25927,27088,43767,
#Partially deleted in new
chr6	89178769	89217777	chr6:89178769-89217777	0	-	89204678	89217322	789624	11	294,197,153,141,83,224,68,107,51,99,577,	0,1522,3135,6540,11395,19250,20592,22389,24665,25826,38431,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	89205470	89217261	chr6:89205470-89217261	0	-	89205470	89205470	8553170	2	274,61,	0,11730,
#Partially deleted in new
chr6	89257207	89269353	chr6:89257207-89269353	0	-	89257207	89257207	8553170	6	774,197,153,141,83,343,	0,7204,8405,10471,10806,11803,
#Partially deleted in new
chr6	89257519	89315299	chr6:89257519-89315299	3	-	89257669	89315165	789624	9	462,197,153,141,83,224,68,107,247,	0,6892,8093,10159,10494,11491,14135,42239,57533,
#Partially deleted in new
chr6	89270392	89315299	chr6:89270392-89315299	0	-	89270392	89270392	8553170	4	117,68,107,247,	0,1262,29366,44660,
#Partially deleted in new
chr6	89301782	89303114	chr6:89301782-89303114	7	+	89301782	89301782	16724991	1	1332,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	89326624	89352848	chr6:89326624-89352848	3	-	89329678	89352569	789624	8	3333,120,130,106,85,132,74,310,	0,6461,8677,11580,11834,15699,17058,25914,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	89364635	89412270	chr6:89364635-89412270	3	-	89368055	89411993	0	7	3572,149,143,115,200,296,425,	0,7801,13035,14588,15532,22659,47210,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	89364997	89412070	chr6:89364997-89412070	1	-	89368055	89380358	0	6	3210,149,143,115,200,225,	0,7439,12673,14226,15170,46848,
#Partially deleted in new
chr6	89377704	89411505	chr6:89377704-89411505	0	-	89377704	89377704	8553170	5	109,115,200,296,172,	0,1519,2463,9590,33629,
#Partially deleted in new
chr6	89422098	89423048	chr6:89422098-89423048	7	-	89422098	89422098	16724991	2	447,162,	0,788,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr6	89433169	89633834	chr6:89433169-89633834	1	+	89566976	89631004	789624	15	206,263,99,99,99,99,99,99,78,135,186,153,114,127,3402,	0,133664,162746,169859,172837,179102,180622,183389,184784,190240,190702,191369,194413,195942,197263,
#Partially deleted in new
chr6	89433203	89612370	chr6:89433203-89612370	0	+	89433203	89433203	8553170	5	172,99,99,99,99,	0,162712,169825,172803,179068,
#Partially deleted in new
chr6	89433208	89631583	chr6:89433208-89631583	3	+	89566976	89631004	789624	16	167,263,99,99,99,99,99,99,78,105,135,186,153,114,127,1151,	0,133625,162707,169820,172798,179063,180583,183350,184745,188713,190201,190663,191330,194374,195903,197224,
#Partially deleted in new
chr6	89433212	89631497	chr6:89433212-89631497	1	+	89566976	89631004	789624	16	163,263,99,99,99,99,99,99,78,105,135,186,153,114,112,1065,	0,133621,162703,169816,172794,179059,180579,183346,184741,188709,190197,190659,191326,194370,195899,197220,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	89478140	89478433	chr6:89478140-89478433	3	+	89478140	89478140	8553170	1	293,	0,
#Partially deleted in new
chr6	89483402	89603049	chr6:89483402-89603049	0	+	89566976	89603049	789624	4	156,263,99,21,	0,83431,112513,119626,
#Partially deleted in new
chr6	89504956	89613801	chr6:89504956-89613801	0	+	89566976	89613801	789624	8	47,113,263,99,99,99,99,10,	0,3889,61877,90959,98072,101050,107315,108835,
#Partially deleted in new
chr6	89509152	89603115	chr6:89509152-89603115	0	+	89566976	89603115	789624	4	97,263,99,87,	0,57681,86763,93876,
#Deleted in new
chr6	89560874	89567044	chr6:89560874-89567044	3	-	89560874	89560874	8553170	2	656,155,	0,6015,
#Deleted in new
chr6	89562389	89566971	chr6:89562389-89566971	1	-	89562389	89562389	8553170	3	247,113,82,	0,2857,4500,
#Partially deleted in new
chr6	89562400	89631336	chr6:89562400-89631336	1	+	89566976	89631004	789624	16	498,263,99,99,99,99,99,99,78,105,135,186,153,114,127,904,	0,4433,33515,40628,43606,49871,51391,54158,55553,59521,61009,61471,62138,65182,66711,68032,
#Partially deleted in new
chr6	89562630	89603071	chr6:89562630-89603071	0	+	89566976	89603071	789624	3	268,263,43,	0,4203,40398,
#Partially deleted in new
chr6	89562785	89618410	chr6:89562785-89618410	1	+	89566976	89618163	789624	9	113,263,99,99,99,99,99,99,457,	0,4048,33130,40243,43221,49486,51006,53773,55168,
#Partially deleted in new
chr6	89562844	89606042	chr6:89562844-89606042	0	+	89566976	89606042	789624	5	79,263,99,99,36,	0,3989,33071,40184,43162,
#Partially deleted in new
chr6	89566929	89627678	chr6:89566929-89627678	0	+	89566976	89627678	789624	5	167,135,186,153,96,	0,56480,56942,57609,60653,
#Partially deleted in new
chr6	89566975	89631500	chr6:89566975-89631500	1	+	89566976	89631004	789624	13	121,99,99,99,99,99,105,135,186,153,114,112,1068,	0,28940,36053,45296,46816,49583,54946,56434,56896,57563,60607,62136,63457,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	89568143	89638482	chr6:89568143-89638482	0	-	89568143	89568143	8553170	6	169,113,228,114,141,79,	0,13382,53577,56345,69598,70260,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	89568143	89638716	chr6:89568143-89638716	1	-	89621837	89638716	789624	5	169,113,228,141,45,	0,13382,53577,69598,70528,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	89601600	89638734	chr6:89601600-89638734	0	-	89621837	89638716	789624	4	1509,228,141,63,	0,20120,36141,37071,
#Partially deleted in new
chr6	89602992	89631477	chr6:89602992-89631477	0	+	89602992	89602992	8553170	13	135,99,99,99,99,78,105,135,186,153,114,127,1045,	0,3014,9279,10799,13566,14961,18929,20417,20879,21546,24590,26119,27440,
#Partially deleted in new
chr6	89613792	89623460	chr6:89613792-89623460	0	+	89613792	89616906	789624	6	98,99,83,78,105,51,	0,2766,3081,4161,8129,9617,
#Partially deleted in new
chr6	89616397	89623513	chr6:89616397-89623513	0	+	89616397	89616397	8553170	4	260,78,105,104,	0,1556,5524,7012,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	89619596	89638497	chr6:89619596-89638497	0	-	89619596	89619596	8553170	5	608,228,114,141,226,	0,2124,4892,18145,18675,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	89621213	89633654	chr6:89621213-89633654	0	+	89621213	89621213	8553170	7	813,135,186,153,114,127,3222,	0,2196,2658,3325,6369,7898,9219,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	89621378	89638734	chr6:89621378-89638734	1	-	89621917	89638716	789624	3	570,158,63,	0,16346,17293,
#Partially deleted in new
chr6	89623966	89630555	chr6:89623966-89630555	0	+	89623966	89630555	789624	4	91,114,127,123,	0,3616,5145,6466,
#Partially deleted in new
chr6	89624655	89629475	chr6:89624655-89629475	0	+	89624655	89629354	789624	3	36,114,364,	0,2927,4456,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	89628781	89630509	chr6:89628781-89630509	0	+	89628781	89628781	8553170	2	457,77,	0,1651,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	89632223	89638753	chr6:89632223-89638753	3	-	89637272	89638716	789624	3	5130,141,82,	0,5518,6448,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	89634806	89638401	chr6:89634806-89638401	0	-	89634806	89634806	789624	3	2547,158,130,	0,2918,3465,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	89636856	89638486	chr6:89636856-89638486	0	-	89636856	89636856	8553170	3	497,141,83,	0,885,1547,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	89636912	89638749	chr6:89636912-89638749	1	-	89637337	89638716	789624	3	441,158,78,	0,812,1759,
#Partially deleted in new
chr6	89637026	89638483	chr6:89637026-89638483	0	-	89637026	89637026	8553170	3	327,158,80,	0,698,1377,
#Partially deleted in new
chr6	89637047	89638432	chr6:89637047-89638432	0	-	89637047	89637047	8553170	3	306,141,161,	0,694,1224,
#Partially deleted in new
chr6	89642498	89819723	chr6:89642498-89819723	3	-	89644004	89819607	789624	102	1695,143,64,115,74,175,116,90,164,171,205,102,162,308,148,153,176,142,138,162,164,156,227,486,116,106,127,147,163,199,74,110,147,122,95,96,236,274,162,706,110,388,215,171,127,232,211,121,158,134,116,133,114,221,212,149,209,117,160,262,264,90,189,108,198,123,209,198,219,130,145,131,139,139,135,142,147,209,179,152,111,148,114,97,145,104,212,61,149,113,96,82,194,115,104,132,243,193,108,225,227,218,	0,2516,4041,5533,5757,7525,8233,9693,10493,11665,13265,14201,15710,16111,18932,19588,20293,21988,25515,28420,29701,30048,30737,31605,32965,33603,35071,36100,38090,40633,41332,42377,43328,44403,44845,45579,46074,47371,48174,49944,51575,53106,53861,56366,57102,57564,58147,59059,59405,63560,64862,65997,68182,69537,70076,70649,72044,73154,74151,75867,76268,76637,80456,81013,82700,85334,86432,88227,90058,95827,97735,100651,101077,102774,102993,104830,106724,107044,107855,108932,111013,111584,113778,115756,116317,119146,119820,129062,130074,132122,134101,137713,138900,142513,145355,147281,147660,151263,151601,152078,160829,177007,
#Deleted in new
chr6	89642774	89644193	chr6:89642774-89644193	0	-	89644004	89644193	789624	2	438,251,	0,1168,
#Partially deleted in new
chr6	89643511	89819723	chr6:89643511-89819723	1	-	89644004	89819607	789624	102	682,143,64,115,74,175,116,90,164,171,205,102,162,308,148,153,176,142,138,162,164,156,227,486,116,106,127,147,163,199,74,110,147,122,95,96,236,274,162,711,105,388,215,171,127,232,211,121,158,134,116,133,114,221,212,149,209,117,160,262,264,90,189,108,198,123,209,198,219,130,145,131,139,139,135,142,147,209,179,152,111,148,114,97,145,104,212,61,149,113,96,82,194,115,104,132,243,193,108,225,227,218,	0,1503,3028,4520,4744,6512,7220,8680,9480,10652,12252,13188,14697,15098,17919,18575,19280,20975,24502,27407,28688,29035,29724,30592,31952,32590,34058,35087,37077,39620,40319,41364,42315,43390,43832,44566,45061,46358,47161,48931,50567,52093,52848,55353,56089,56551,57134,58046,58392,62547,63849,64984,67169,68524,69063,69636,71031,72141,73138,74854,75255,75624,79443,80000,81687,84321,85419,87214,89045,94814,96722,99638,100064,101761,101980,103817,105711,106031,106842,107919,110000,110571,112765,114743,115304,118133,118807,128049,129061,131109,133088,136700,137887,141500,144342,146268,146647,150250,150588,151065,159816,175994,
#Partially deleted in new
chr6	89670917	89672574	chr6:89670917-89672574	0	-	89670917	89670917	8553170	2	163,375,	0,1282,
#Deleted in new
chr6	89673468	89675783	chr6:89673468-89675783	3	+	89673468	89673468	8553170	2	84,388,	0,1927,
#Partially deleted in new
chr6	89749222	89819718	chr6:89749222-89819718	0	-	89749222	89819607	789624	24	147,209,179,152,111,148,114,97,145,104,212,61,149,113,96,82,194,132,243,193,108,225,227,213,	0,320,1131,2208,4289,4860,7054,9032,9593,12422,13096,22338,23350,25398,27377,30989,32176,40557,40936,44539,44877,45354,54105,70283,
#Partially deleted in new
chr6	89797597	89797877	chr6:89797597-89797877	7	+	89797597	89797597	16724991	1	280,	0,
#Partially deleted in new
chr6	89814708	89815463	chr6:89814708-89815463	7	+	89814708	89814708	16724991	1	755,	0,
#Partially deleted in new
chr6	89829893	89862793	chr6:89829893-89862793	0	+	89846589	89862793	789624	7	41,83,69,101,75,116,668,	0,16668,23272,24923,25576,27190,32232,
#Partially deleted in new
chr6	89829899	89862793	chr6:89829899-89862793	0	+	89846589	89862793	789624	7	168,83,69,101,75,116,668,	0,16662,23266,24917,25570,27184,32226,
#Partially deleted in new
chr6	89829899	89871412	chr6:89829899-89871412	3	+	89846589	89871412	789624	9	207,83,69,101,75,116,2246,3130,124,	0,16662,23266,24917,25570,27184,32226,36053,41389,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	89829930	89857349	chr6:89829930-89857349	0	+	89829930	89829930	8553170	6	1409,83,69,101,75,266,	0,16631,23235,24886,25539,27153,
#Partially deleted in new
chr6	89829938	89874436	chr6:89829938-89874436	0	+	89829938	89829938	8553170	10	168,83,69,101,75,116,2246,3130,100,631,	0,16623,23227,24878,25531,27145,32187,36014,41350,43867,
#Partially deleted in new
chr6	89829940	89874434	chr6:89829940-89874434	0	+	89829940	89829940	8553170	8	127,83,69,101,75,116,100,629,	0,16621,23225,24876,25529,27143,41348,43865,
#Partially deleted in new
chr6	89841328	89841424	chr6:89841328-89841424	3	+	89841328	89841328	8553170	1	96,	0,
#Deleted in new
chr6	89876543	89876878	chr6:89876543-89876878	7	+	89876543	89876543	16724991	1	335,	0,
#Partially deleted in new
chr6	89886155	89887848	chr6:89886155-89887848	7	+	89886155	89886155	16724991	2	975,421,	0,1272,
#Deleted in new
chr6	89894468	89896120	chr6:89894468-89896120	1	+	89894468	89896100	789624	1	1652,	0,
#Partially deleted in new
chr6	89894468	89921163	chr6:89894468-89921163	3	+	89894468	89921163	789624	2	1440,39,	0,26656,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	89898282	89898392	chr6:89898282-89898392	3	-	89898282	89898282	8553170	1	110,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	89920195	89921760	chr6:89920195-89921760	0	+	89920195	89920195	8553170	2	120,636,	0,929,
#Partially deleted in new
chr6	89926528	90296742	chr6:89926528-90296742	1	-	89932407	90008844	0	9	6362,207,1593,255,149,113,78,93,263,	0,11615,23741,82073,162432,280040,325984,345320,369951,
#Partially deleted in new
chr6	89926528	90296908	chr6:89926528-90296908	3	-	89932407	90008844	0	7	6362,207,1593,255,149,113,429,	0,11615,23741,82073,162432,280040,369951,
#Partially deleted in new
chr6	89931484	90296742	chr6:89931484-90296742	1	-	89932407	90008844	0	7	1406,207,1593,255,149,108,263,	0,6659,18785,77117,157476,275084,364995,
#Partially deleted in new
chr6	89950115	89951989	chr6:89950115-89951989	0	+	89950115	89950115	8553170	2	59,359,	0,1515,
#Partially deleted in new
chr6	89950410	89953186	chr6:89950410-89953186	3	+	89950410	89950410	8553170	3	164,476,236,	0,1220,2540,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	90001221	90001506	chr6:90001221-90001506	3	-	90001221	90001221	8553170	1	285,	0,
#Partially deleted in new
chr6	90008089	90008827	chr6:90008089-90008827	0	-	90008089	90008089	8553170	2	169,226,	0,512,
#Partially deleted in new
chr6	90008601	90296742	chr6:90008601-90296742	0	-	90008601	90008844	789624	4	255,149,113,263,	0,80359,197967,287878,
#Partially deleted in new
chr6	90008601	90296742	chr6:90008601-90296742	0	-	90008601	90008844	789624	5	255,149,108,93,263,	0,80359,197967,263247,287878,
#Partially deleted in new
chr6	90088960	90296742	chr6:90088960-90296742	0	-	90088960	90088960	8553170	4	149,113,93,263,	0,117608,182888,207519,
#Partially deleted in new
chr6	90089053	90218245	chr6:90089053-90218245	0	-	90089053	90089053	8553170	3	56,113,267,	0,117515,128925,
#Partially deleted in new
chr6	90089065	90296742	chr6:90089065-90296742	0	-	90089065	90089065	8553170	4	44,113,78,263,	0,117503,163447,207414,
#Partially deleted in new
chr6	90104364	90296742	chr6:90104364-90296742	0	-	90104364	90104364	8553170	4	71,113,93,263,	0,102204,167484,192115,
#Deleted in new
chr6	90116699	90117105	chr6:90116699-90117105	7	-	90116699	90116699	16724991	1	406,	0,
#Deleted in new
chr6	90312741	90312833	chr6:90312741-90312833	3	+	90312741	90312741	5263520	1	92,	0,
#Partially deleted in new
chr6	90320442	90356578	chr6:90320442-90356578	3	+	90320442	90320442	8553170	9	59,69,157,315,171,112,134,55,199,	0,10921,20771,24227,24778,25533,26214,35321,35937,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	90345218	90362632	chr6:90345218-90362632	1	+	90345218	90345218	8553170	6	173,146,134,234,58,686,	0,757,1438,11161,15549,16728,
#Partially deleted in new
chr6	90513572	90586883	chr6:90513572-90586883	1	-	90516648	90586883	0	16	3109,62,106,65,81,130,131,82,131,129,125,139,46,66,111,120,	0,5685,10105,22764,30979,33685,34474,36895,38476,39885,42927,46503,48049,54985,58124,73191,
#Partially deleted in new
chr6	90513572	90586889	chr6:90513572-90586889	1	-	90516648	90586883	0	15	3109,62,106,65,130,131,82,131,129,125,139,46,66,111,126,	0,5685,10105,22764,33685,34474,36895,38476,39885,42927,46503,48049,54985,58124,73191,
#Partially deleted in new
chr6	90513572	90587045	chr6:90513572-90587045	3	-	90516500	90586883	0	17	3109,116,62,106,65,81,130,131,82,131,129,125,139,46,66,111,282,	0,4874,5685,10105,22764,30979,33685,34474,36895,38476,39885,42927,46503,48049,54985,58124,73191,
#Partially deleted in new
chr6	90513572	90587045	chr6:90513572-90587045	1	-	90516500	90586883	0	16	3109,116,62,106,65,130,131,82,131,129,125,139,46,66,111,282,	0,4874,5685,10105,22764,33685,34474,36895,38476,39885,42927,46503,48049,54985,58124,73191,
#Partially deleted in new
chr6	90515633	90537218	chr6:90515633-90537218	0	-	90515633	90515633	8553170	5	1048,116,62,106,882,	0,2813,3624,8044,20703,
#Partially deleted in new
chr6	90515682	90553464	chr6:90515682-90553464	1	-	90516500	90548169	789624	9	999,116,62,106,65,130,131,1712,7,	0,2764,3575,7995,20654,31575,32364,34785,37775,
#Partially deleted in new
chr6	91390312	91393000	chr6:91390312-91393000	3	-	91390312	91390312	8553170	3	232,124,86,	0,1891,2602,
#Deleted in new
chr6	91521659	91521737	chr6:91521659-91521737	3	+	91521659	91521659	5263520	1	78,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	91629914	91690428	chr6:91629914-91690428	3	-	91629914	91629914	789624	4	315,155,145,118,	0,3766,55133,60396,
#Partially deleted in new
chr6	91726809	91727070	chr6:91726809-91727070	7	+	91726809	91726809	16724991	1	261,	0,
#Partially deleted in new
chr6	91727158	91727324	chr6:91727158-91727324	7	+	91727158	91727158	16724991	1	166,	0,
#Partially deleted in new
chr6	91727281	91727505	chr6:91727281-91727505	7	-	91727281	91727281	16724991	1	224,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	91739608	91739897	chr6:91739608-91739897	3	+	91739608	91739608	8553170	1	289,	0,
#Deleted in new
chr6	91815842	91816428	chr6:91815842-91816428	7	-	91815842	91815842	16724991	1	586,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	92002609	92180156	chr6:92002609-92180156	3	-	92002609	92002609	8553170	5	2057,314,64,253,32,	0,14204,22719,25281,177515,
#Deleted in new
chr6	92013841	92014734	chr6:92013841-92014734	7	+	92013841	92013841	16724991	1	893,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	92119422	92119633	chr6:92119422-92119633	3	+	92119422	92119422	8553170	1	211,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	92387840	92388827	chr6:92387840-92388827	3	-	92387840	92387840	8553170	1	987,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	92723002	92723829	chr6:92723002-92723829	3	-	92723002	92723002	8553170	2	85,508,	0,319,
#Deleted in new
chr6	92790452	92790665	chr6:92790452-92790665	3	+	92790452	92790452	8553170	1	213,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	92887250	92888581	chr6:92887250-92888581	7	-	92887250	92887250	16724991	2	139,788,	0,543,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	93070386	93103384	chr6:93070386-93103384	3	+	93070386	93070386	8553170	2	144,595,	0,32403,
#Deleted in new
chr6	93091975	93092760	chr6:93091975-93092760	7	-	93091975	93091975	16724991	1	785,	0,
#Partially deleted in new
chr6	93240019	93419526	chr6:93240019-93419526	3	-	93243425	93419341	0	17	3521,156,194,150,210,62,186,126,56,109,184,125,336,156,670,65,282,	0,5278,6772,14627,15808,17442,18079,19334,23840,24574,29457,32278,116697,118236,170481,174683,179225,
#Deleted in new
chr6	93409653	93419547	chr6:93409653-93419547	1	-	93410492	93419341	0	3	1517,65,303,	0,5049,9591,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	93811824	93813036	chr6:93811824-93813036	3	+	93811824	93811824	8553170	1	1212,	0,
#Deleted in new
chr6	93879105	93879229	chr6:93879105-93879229	3	+	93879105	93879105	8553170	1	124,	0,
#Partially deleted in new
chr6	93886899	93889410	chr6:93886899-93889410	3	+	93886899	93886899	8553170	2	157,327,	0,2184,
#Partially deleted in new
chr6	94163919	94194658	chr6:94163919-94194658	3	+	94163919	94163919	8553170	2	30,235,	0,30504,
#Deleted in new
chr6	94344736	94344962	chr6:94344736-94344962	7	+	94344736	94344736	16724991	1	226,	0,
#Deleted in new
chr6	94397663	94398829	chr6:94397663-94398829	3	+	94397663	94397663	8553170	1	1166,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	94442029	94443809	chr6:94442029-94443809	7	-	94442029	94442029	16724991	1	1780,	0,
#Deleted in new
chr6	94446739	94447179	chr6:94446739-94447179	7	-	94446739	94446739	16724991	1	440,	0,
#Deleted in new
chr6	95504181	95504496	chr6:95504181-95504496	7	+	95504181	95504181	16724991	1	315,	0,
#Deleted in new
chr6	95575182	95577450	chr6:95575182-95577450	3	-	95575182	95575182	789624	1	2268,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	95577542	95609457	chr6:95577542-95609457	3	+	95586439	95606405	789624	5	96,582,110,77,3710,	0,8859,19194,27284,28205,
#Partially deleted in new
chr6	95577542	95587381	chr6:95577542-95587381	1	+	95586439	95587036	789624	2	96,980,	0,8859,
#Partially deleted in new
chr6	95630114	95632929	chr6:95630114-95632929	7	-	95630114	95630114	16724991	2	332,167,	0,2648,
#Partially deleted in new
chr6	95991106	95992349	chr6:95991106-95992349	7	+	95991106	95991106	16724991	1	1243,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	96015983	96215612	chr6:96015983-96215612	3	+	96203155	96204235	789624	3	229,89,12465,	0,98055,187164,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	96015983	96037439	chr6:96015983-96037439	0	+	96015983	96015983	8553170	3	229,140,796,	0,4850,20660,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	96282566	96282863	chr6:96282566-96282863	3	+	96282566	96282566	8553170	1	297,	0,
#Deleted in new
chr6	96521594	96522964	chr6:96521594-96522964	0	+	96521594	96521594	8553170	2	356,102,	0,1268,
#Partially deleted in new
chr6	96521807	96555276	chr6:96521807-96555276	3	+	96521873	96553503	789624	19	143,146,29,98,115,131,59,147,176,180,121,123,118,167,131,81,86,181,1992,	0,1338,2574,3489,4513,6694,12455,14436,15566,16823,18727,21086,26356,27604,27861,29625,30030,30674,31477,
#Partially deleted in new
chr6	96562547	96616636	chr6:96562547-96616636	3	+	96603613	96615772	0	6	173,171,175,170,187,1028,	0,41054,42202,43354,48024,53061,
#Partially deleted in new
chr6	96562583	96616568	chr6:96562583-96616568	1	+	96603613	96615772	0	7	137,231,171,175,170,187,960,	0,541,41018,42166,43318,47988,53025,
#Partially deleted in new
chr6	96562583	96610697	chr6:96562583-96610697	0	+	96603613	96610697	789624	5	137,171,175,170,126,	0,41018,42166,43318,47988,
#Deleted in new
chr6	96648488	96649069	chr6:96648488-96649069	7	-	96648488	96648488	16724991	1	581,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	96649452	96649591	chr6:96649452-96649591	3	-	96649452	96649452	8553170	1	139,	0,
#Deleted in new
chr6	96653273	96654142	chr6:96653273-96654142	7	+	96653273	96653273	16724991	1	869,	0,
#Deleted in new
chr6	96672128	96672969	chr6:96672128-96672969	7	-	96672128	96672128	16724991	1	841,	0,
#Deleted in new
chr6	96750823	96751728	chr6:96750823-96751728	7	+	96750823	96750823	16724991	1	905,	0,
#Partially deleted in new
chr6	96785136	96795821	chr6:96785136-96795821	3	+	96785136	96785136	8553170	3	195,63,223,	0,5516,10462,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	96794125	96837463	chr6:96794125-96837463	3	-	96798471	96799731	789624	2	5756,196,	0,43142,
#Partially deleted in new
chr6	96889312	96897881	chr6:96889312-96897881	3	-	96891103	96897801	789624	3	2079,104,216,	0,7431,8353,
#Partially deleted in new
chr6	96891011	96896918	chr6:96891011-96896918	0	-	96891011	96891011	8553170	2	380,175,	0,5732,
#Partially deleted in new
chr6	96891150	96897874	chr6:96891150-96897874	0	-	96891150	96891150	8553170	4	241,70,104,209,	0,4933,5593,6515,
#Partially deleted in new
chr6	96924619	97140754	chr6:96924619-97140754	1	+	96967060	97139282	789624	10	407,88,181,99,216,727,59,193,95,1634,	0,42376,51377,140008,160506,189163,202784,206137,208033,214501,
#Partially deleted in new
chr6	96924619	97140754	chr6:96924619-97140754	3	+	96967060	97139282	789624	9	407,88,181,216,727,59,193,95,1634,	0,42376,51377,160506,189163,202784,206137,208033,214501,
#Partially deleted in new
chr6	96924619	97140754	chr6:96924619-97140754	1	+	97064704	97139282	789624	9	407,88,181,108,99,59,193,95,1634,	0,42376,51377,116872,140008,202784,206137,208033,214501,
#Partially deleted in new
chr6	96924728	97140754	chr6:96924728-97140754	1	+	96967060	97139282	789624	11	298,88,181,108,99,216,727,59,193,95,1634,	0,42267,51268,116763,139899,160397,189054,202675,206028,207924,214392,
#Partially deleted in new
chr6	96967008	97130942	chr6:96967008-97130942	0	+	96967060	97127412	789624	6	75,181,108,99,59,186,	0,8988,74483,97619,160395,163748,
#Partially deleted in new
chr6	97010198	97140754	chr6:97010198-97140754	1	+	97127441	97139282	789624	9	67,108,171,99,216,59,193,95,1634,	0,31293,52134,54429,74927,117205,120558,122454,128922,
#Partially deleted in new
chr6	97064627	97114179	chr6:97064627-97114179	0	+	97064627	97113919	789624	4	99,216,79,397,	0,20498,40815,49155,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr6	97142160	97283176	chr6:97142160-97283176	3	-	97146805	97282477	789624	25	4727,168,97,164,212,170,160,143,152,151,194,510,227,120,63,177,114,131,91,178,88,50,126,240,190,	0,7692,9610,19841,23085,25910,30902,36282,37247,39743,44336,86733,89265,91700,104467,112396,121174,125711,127741,130543,130814,136688,139076,140153,140826,
#Partially deleted in new
chr6	97146544	97282553	chr6:97146544-97282553	1	-	97146805	97282477	789624	23	343,168,97,164,212,170,160,143,152,151,194,510,227,63,177,114,131,91,178,88,50,126,240,	0,3308,5226,15457,18701,21526,26518,31898,32863,35359,39952,82349,84881,100083,108012,116790,121327,123357,126159,126430,132304,134692,135769,
#Partially deleted in new
chr6	97151577	97162045	chr6:97151577-97162045	0	-	97151577	97151577	8553170	2	290,44,	0,10424,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	97230268	97283188	chr6:97230268-97283188	0	-	97270277	97282477	789624	14	1384,120,63,177,114,131,91,177,178,88,50,126,240,144,	0,3592,16359,24288,33066,37603,39633,39838,42435,42706,48580,50968,52045,52776,
#Partially deleted in new
chr6	97233860	97281304	chr6:97233860-97281304	0	-	97233860	97281304	789624	9	120,63,177,131,91,178,88,50,68,	0,12767,20696,34011,36041,38843,39114,44988,47376,
#Partially deleted in new
chr6	97245978	97263352	chr6:97245978-97263352	0	-	97246147	97263352	789624	4	178,63,177,18,	0,649,8578,17356,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	97253464	97282511	chr6:97253464-97282511	0	-	97253464	97253464	8553170	9	1269,114,131,91,178,88,50,126,198,	0,9870,14407,16437,19239,19510,25384,27772,28849,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	97258662	97273105	chr6:97258662-97273105	0	-	97258662	97258662	8553170	5	3312,4668,91,178,131,	0,4672,11239,14041,14312,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	97259371	97272801	chr6:97259371-97272801	0	-	97259371	97259371	8553170	5	298,114,131,91,98,	0,3963,8500,10530,13332,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	97265719	97283217	chr6:97265719-97283217	0	-	97265719	97265719	8553170	7	2283,2980,88,50,126,240,140,	0,4182,7255,13129,15517,16594,17358,
#Partially deleted in new
chr6	97267903	97283210	chr6:97267903-97283210	0	-	97269909	97282477	789624	6	99,91,50,126,240,115,	0,1998,10945,13333,14410,15192,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	97305585	97310048	chr6:97305585-97310048	0	+	97305585	97305585	8553170	2	511,67,	0,4396,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	97305636	97708850	chr6:97305636-97708850	1	+	97305636	97305636	789624	5	460,172,106,82,1164,	0,306531,312489,396646,402050,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	97440844	97828109	chr6:97440844-97828109	1	+	97440844	97440844	8553170	7	42,49,172,106,82,118,61,	0,38326,171323,177281,261438,266842,387204,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	97440849	97618133	chr6:97440849-97618133	1	+	97440849	97440849	8553170	7	37,96,107,49,172,96,8,	0,5390,7262,38321,171318,175986,177276,
#Partially deleted in new
chr6	97707758	97732712	chr6:97707758-97732712	0	+	97707758	97707758	8553170	2	46,311,	0,24643,
#Partially deleted in new
chr6	97710952	97717197	chr6:97710952-97717197	3	-	97710952	97710952	8553170	3	246,156,97,	0,1384,6148,
#Partially deleted in new
chr6	97816708	98399872	chr6:97816708-98399872	3	+	97816708	97816708	8553170	7	48,158,61,85,104,104,1402,	0,11340,152697,282477,458455,463047,581762,
#Partially deleted in new
chr6	97885500	98398863	chr6:97885500-98398863	1	+	97885500	97885500	8553170	5	155,85,104,75,393,	0,213685,389663,475837,512970,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	97938788	98398771	chr6:97938788-98398771	1	+	97938788	97938788	8553170	8	185,61,79,85,104,117,124,301,	0,30617,137278,160397,336375,353775,355398,459682,
#Partially deleted in new
chr6	98024530	98024621	chr6:98024530-98024621	3	+	98024530	98024530	5263520	1	91,	0,
#Partially deleted in new
chr6	98179498	98179832	chr6:98179498-98179832	7	-	98179498	98179498	16724991	1	334,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	98210019	98214683	chr6:98210019-98214683	3	-	98210019	98210019	8553170	2	704,67,	0,4597,
#Partially deleted in new
chr6	98780256	98780505	chr6:98780256-98780505	7	-	98780256	98780256	16724991	1	249,	0,
#Partially deleted in new
chr6	98829966	98832508	chr6:98829966-98832508	3	-	98829966	98829966	8553170	3	443,311,239,	0,1110,2303,
#Partially deleted in new
chr6	98834591	98839470	chr6:98834591-98839470	3	+	98834873	98836205	789624	1	4879,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	98868537	98947926	chr6:98868537-98947926	3	-	98874277	98926988	789624	10	5904,313,72,214,245,346,584,118,118,121,	0,6877,12015,30730,36888,48836,57939,59167,66224,79268,
#Partially deleted in new
chr6	98873724	98948006	chr6:98873724-98948006	1	-	98874277	98926988	789624	9	717,313,72,214,245,346,584,118,201,	0,1690,6828,25543,31701,43649,52752,53980,74081,
#Deleted in new
chr6	99082448	99082761	chr6:99082448-99082761	7	+	99082448	99082448	16724991	1	313,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	99124608	99124696	chr6:99124608-99124696	3	+	99124608	99124608	5263520	1	88,	0,
#Deleted in new
chr6	99174743	99175479	chr6:99174743-99175479	7	+	99174743	99174743	16724991	1	736,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	99271168	99349655	chr6:99271168-99349655	3	-	99281163	99349372	789624	6	10285,117,224,197,136,549,	0,20535,52275,62182,71729,77938,
#Partially deleted in new
chr6	99280666	99342934	chr6:99280666-99342934	1	-	99281163	99291803	789624	3	787,117,37,	0,11037,62231,
#Partially deleted in new
chr6	99280734	99284212	chr6:99280734-99284212	0	-	99280734	99280734	8553170	2	719,107,	0,3371,
#Partially deleted in new
chr6	99323482	99350062	chr6:99323482-99350062	0	-	99323482	99323482	8553170	5	185,197,136,122,47,	0,9868,19415,25624,26533,
#Partially deleted in new
chr6	99369399	99394204	chr6:99369399-99394204	3	-	99369599	99394179	789624	7	421,160,243,100,153,127,131,	0,2028,6540,7986,10789,14298,24674,
#Partially deleted in new
chr6	99369403	99377454	chr6:99369403-99377454	1	-	99369599	99377430	789624	3	417,160,69,	0,2024,7982,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	99376117	99394191	chr6:99376117-99394191	0	-	99376117	99376117	8553170	6	65,100,153,123,127,118,	0,1268,4071,6890,7580,17956,
#Partially deleted in new
chr6	99398050	99425308	chr6:99398050-99425308	3	-	99400539	99414659	789624	12	3580,171,54,100,138,191,172,224,189,119,80,94,	0,4489,5778,6552,7980,10030,11122,12690,14500,16521,18298,27164,
#Partially deleted in new
chr6	99398050	99425277	chr6:99398050-99425277	1	-	99400539	99414659	789624	13	3580,171,54,100,138,191,172,224,189,115,112,80,63,	0,4489,5778,6552,7980,10030,11122,12690,14500,16521,17585,18298,27164,
#Partially deleted in new
chr6	99399963	99425331	chr6:99399963-99425331	1	-	99400539	99414659	789624	11	1667,171,54,100,138,191,172,224,189,119,117,	0,2576,3865,4639,6067,8117,9209,10777,12587,14608,25251,
#Partially deleted in new
chr6	99399974	99402597	chr6:99399974-99402597	0	-	99400273	99402597	789624	2	337,58,	0,2565,
#Partially deleted in new
chr6	99401459	99404546	chr6:99401459-99404546	0	-	99401459	99401459	8553170	2	171,2007,	0,1080,
#Partially deleted in new
chr6	99401460	99425308	chr6:99401460-99425308	0	-	99404462	99414659	789624	11	170,171,874,138,191,172,224,189,119,80,94,	0,1079,2368,4570,6620,7712,9280,11090,13111,14888,23754,
#Partially deleted in new
chr6	99401461	99406127	chr6:99401461-99406127	0	-	99401461	99401461	8553170	4	169,171,100,97,	0,1078,3141,4569,
#Partially deleted in new
chr6	99408152	99410992	chr6:99408152-99410992	0	-	99408152	99408152	8553170	2	119,1820,	0,1020,
#Partially deleted in new
chr6	99410940	99425275	chr6:99410940-99425275	0	-	99410940	99410940	8553170	6	24,189,119,179,80,61,	0,1610,3631,4628,5408,14274,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	99411735	99425270	chr6:99411735-99425270	0	-	99411735	99411735	8553170	5	583,189,119,80,56,	0,815,2836,4613,13479,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	99411790	99425258	chr6:99411790-99425258	0	-	99411790	99411790	8553170	3	949,1857,44,	0,2781,13424,
#Partially deleted in new
chr6	99424921	99431373	chr6:99424921-99431373	3	+	99424921	99424921	8553170	2	977,661,	0,5791,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr6	99432378	99515425	chr6:99432378-99515425	3	-	99435715	99510220	789624	18	3468,154,87,98,667,144,57,92,82,88,131,96,140,101,104,173,110,34,	0,4867,7390,11186,13418,32225,32701,34293,36158,43764,50374,55821,56302,71386,75049,76231,77742,83013,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	99432435	99508781	chr6:99432435-99508781	0	-	99476215	99508781	789624	13	3411,154,87,98,667,144,57,88,96,140,101,104,172,	0,4810,7333,11129,13361,32168,32644,43707,55764,56245,71329,74992,76174,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr6	99432438	99515376	chr6:99432438-99515376	1	-	99435715	99510220	789624	18	3408,154,87,98,667,144,57,92,82,88,131,96,140,101,104,173,110,523,	0,4807,7330,11126,13358,32165,32641,34233,36098,43704,50314,55761,56242,71326,74989,76171,77682,82415,
#Partially deleted in new
chr6	99435543	99515422	chr6:99435543-99515422	1	-	99435715	99510220	789624	17	303,154,87,98,667,57,92,82,88,131,96,140,101,104,173,110,31,	0,1702,4225,8021,10253,29536,31128,32993,40599,47209,52656,53137,68221,71884,73066,74577,79848,
#Partially deleted in new
chr6	99445961	99464902	chr6:99445961-99464902	0	-	99445961	99445961	8553170	2	502,299,	0,18642,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	99462463	99510230	chr6:99462463-99510230	0	-	99468147	99510220	789624	14	352,144,57,92,71,82,88,131,96,140,101,104,173,110,	0,2140,2616,4208,5636,6073,13679,20289,25736,26217,41301,44964,46146,47657,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	99462595	99482865	chr6:99462595-99482865	0	-	99462809	99482865	789624	5	220,144,57,88,113,	0,2008,2484,13547,20157,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	99462597	99476207	chr6:99462597-99476207	0	-	99462809	99476207	789624	6	218,144,57,92,82,65,	0,2006,2482,4074,5939,13545,
#Partially deleted in new
chr6	99464635	99503773	chr6:99464635-99503773	0	-	99465107	99503773	789624	8	112,57,82,88,131,96,140,9,	0,444,3901,11507,18117,23564,24045,39129,
#Partially deleted in new
chr6	99482261	99515489	chr6:99482261-99515489	1	-	99482727	99510220	789624	8	622,96,140,101,104,173,110,98,	0,5938,6419,21503,25166,26348,27859,33130,
#Partially deleted in new
chr6	99482513	99515376	chr6:99482513-99515376	1	-	99482727	99510220	789624	8	370,96,140,101,104,173,110,523,	0,5686,6167,21251,24914,26096,27607,32340,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	99501742	99515418	chr6:99501742-99515418	0	-	99501742	99501742	8553170	6	267,101,104,173,110,27,	0,2022,5685,6867,8378,13649,
#Partially deleted in new
chr6	99508725	99521728	chr6:99508725-99521728	0	-	99508725	99510220	789624	4	57,110,224,78,	0,1395,12214,12925,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	99520692	99531918	chr6:99520692-99531918	3	+	99526078	99531720	789624	4	455,46,174,287,	0,5371,10670,10939,
#Partially deleted in new
chr6	99521074	99531720	chr6:99521074-99531720	1	+	99521074	99531720	789624	3	73,174,89,	0,10288,10557,
#Partially deleted in new
chr6	99542379	99568973	chr6:99542379-99568973	3	-	99543554	99568527	0	12	1230,119,80,68,92,36,56,52,70,85,107,478,	0,2732,4015,7128,7838,8613,9460,16117,18987,19217,20462,26116,
#Partially deleted in new
chr6	99542386	99568631	chr6:99542386-99568631	0	-	99549388	99568527	789624	13	1223,119,80,88,68,92,36,56,52,70,85,107,136,	0,2725,4008,6925,7121,7831,8606,9453,16110,18980,19210,20455,26109,
#Partially deleted in new
chr6	99542386	99568628	chr6:99542386-99568628	1	-	99543554	99568527	789624	12	1223,119,80,65,92,36,56,52,70,85,107,133,	0,2725,4008,7121,7831,8606,9453,16110,18980,19210,20455,26109,
#Partially deleted in new
chr6	99542501	99568713	chr6:99542501-99568713	1	-	99544221	99568527	789624	13	1108,95,119,80,68,92,36,56,52,70,85,107,218,	0,1677,2610,3893,7006,7716,8491,9338,15995,18865,19095,20340,25994,
#Partially deleted in new
chr6	99543288	99568646	chr6:99543288-99568646	0	-	99561425	99568527	789624	11	321,119,80,68,92,36,56,52,70,107,151,	0,1823,3106,6219,6929,7704,8551,15208,18078,19553,25207,
#Partially deleted in new
chr6	99543447	99568825	chr6:99543447-99568825	1	-	99543554	99561405	0	12	162,119,80,68,92,36,56,52,70,85,107,108,	0,1664,2947,6060,6770,7545,8392,15049,17919,18149,19394,25270,
#Partially deleted in new
chr6	99543463	99561658	chr6:99543463-99561658	0	-	99544221	99561658	789624	11	146,68,119,80,68,92,36,56,52,70,62,	0,742,1648,2931,6044,6754,7529,8376,15033,17903,18133,
#Partially deleted in new
chr6	99543474	99568660	chr6:99543474-99568660	1	-	99543554	99561405	0	11	135,119,80,68,92,36,56,52,70,85,165,	0,1637,2920,6033,6743,7518,8365,15022,17892,18122,25021,
#Partially deleted in new
chr6	99543779	99568652	chr6:99543779-99568652	0	-	99551892	99568527	789624	12	494,119,80,68,92,36,56,48,70,85,107,157,	0,1332,2615,5728,6438,7213,8060,14721,17587,17817,19062,24716,
#Partially deleted in new
chr6	99543779	99568662	chr6:99543779-99568662	1	-	99544221	99568527	789624	12	494,119,80,68,92,36,56,52,70,85,107,167,	0,1332,2615,5728,6438,7213,8060,14717,17587,17817,19062,24716,
#Partially deleted in new
chr6	99545167	99568227	chr6:99545167-99568227	0	-	99545167	99561405	789624	11	63,80,68,92,36,56,52,70,85,107,50,	0,1227,4340,5050,5825,6672,13329,16199,16429,17674,23010,
#Partially deleted in new
chr6	99545204	99549647	chr6:99545204-99549647	0	-	99545204	99545204	8553170	3	26,80,140,	0,1190,4303,
#Partially deleted in new
chr6	99549388	99568814	chr6:99549388-99568814	1	-	99549388	99568527	789624	10	11,68,92,36,56,52,70,85,107,319,	0,119,829,1604,2451,9108,11978,12208,13453,19107,
#Partially deleted in new
chr6	99550570	99568628	chr6:99550570-99568628	0	-	99550570	99550570	8553170	8	40,36,56,52,70,85,107,133,	0,422,1269,7926,10796,11026,12271,17925,
#Partially deleted in new
chr6	99550855	99568767	chr6:99550855-99568767	0	-	99550855	99550855	8553170	7	173,56,52,70,85,107,272,	0,984,7641,10511,10741,11986,17640,
#Partially deleted in new
chr6	99550993	99568623	chr6:99550993-99568623	0	-	99550993	99568527	789624	8	35,56,52,70,85,107,141,128,	0,846,7503,10373,10603,11848,15904,17502,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	99557239	99568628	chr6:99557239-99568628	1	-	99558410	99568527	789624	5	1309,70,85,107,133,	0,4127,4357,5602,11256,
#Partially deleted in new
chr6	99558413	99561872	chr6:99558413-99561872	0	-	99558413	99558413	8553170	3	135,70,276,	0,2953,3183,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	99562019	99568689	chr6:99562019-99568689	0	-	99562019	99562019	8553170	2	929,194,	0,6476,
#Deleted in new
chr6	99568096	99569096	chr6:99568096-99569096	3	+	99568096	99568096	8553170	1	1000,	0,
#Partially deleted in new
chr6	99575711	99576456	chr6:99575711-99576456	7	+	99575711	99575711	16724991	1	745,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	99587610	99589898	chr6:99587610-99589898	3	+	99587610	99587610	8553170	1	2288,	0,
#Partially deleted in new
chr6	99606729	99614759	chr6:99606729-99614759	3	+	99607034	99614759	789624	4	449,132,121,1727,	0,2011,2457,6303,
#Partially deleted in new
chr6	99606773	99615578	chr6:99606773-99615578	0	+	99607034	99609248	789624	4	433,132,121,2546,	0,1967,2413,6259,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	99642236	99642347	chr6:99642236-99642347	3	-	99642236	99642236	8553170	1	111,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	99919909	99994223	chr6:99919909-99994223	3	-	99920939	99956147	789624	6	1346,120,195,210,209,288,	0,14488,23039,27852,36056,74026,
#Partially deleted in new
chr6	99920751	99994247	chr6:99920751-99994247	1	-	99920939	99956147	789624	6	504,120,195,210,209,73,	0,13646,22197,27010,35214,73423,
#Partially deleted in new
chr6	99993943	100076411	chr6:99993943-100076411	0	+	99993943	99993943	8553170	3	58,203,170,	0,6850,82298,
#Partially deleted in new
chr6	99994055	100076413	chr6:99994055-100076413	0	+	99994055	99994055	789624	3	149,203,172,	0,6738,82186,
#Partially deleted in new
chr6	99994065	100026384	chr6:99994065-100026384	1	+	99994065	99994065	8553170	4	139,169,203,310,	0,2096,6728,32009,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	100000939	100076406	chr6:100000939-100076406	3	+	100000939	100000939	8553170	5	57,30,43,134,165,	0,6495,16039,32214,75302,
#Deleted in new
chr6	100050371	100051236	chr6:100050371-100051236	7	-	100050371	100050371	16724991	1	865,	0,
#Partially deleted in new
chr6	100093310	100093768	chr6:100093310-100093768	7	-	100093310	100093310	16724991	1	458,	0,
#Deleted in new
chr6	100136063	100136663	chr6:100136063-100136663	7	+	100136063	100136063	16724991	1	600,	0,
#Deleted in new
chr6	100177208	100178192	chr6:100177208-100178192	7	+	100177208	100177208	16724991	1	984,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	100385014	100464929	chr6:100385014-100464929	3	-	100390360	100463468	789624	12	6077,403,169,148,107,200,86,109,90,83,642,316,	0,8472,35775,62253,63131,63464,64348,64576,65252,68747,78279,79599,
#Partially deleted in new
chr6	100388871	100463677	chr6:100388871-100463677	1	-	100390360	100463468	789624	11	2220,403,169,148,107,200,86,109,90,83,384,	0,4615,31918,58396,59274,59607,60491,60719,61395,64890,74422,
#Partially deleted in new
chr6	100391082	100394042	chr6:100391082-100394042	0	-	100391082	100391082	8553170	2	9,556,	0,2404,
#Partially deleted in new
chr6	100427117	100437484	chr6:100427117-100437484	3	+	100427117	100427117	8553170	2	151,229,	0,10138,
#Deleted in new
chr6	100462602	100464889	chr6:100462602-100464889	0	-	100462602	100462602	8553170	2	1333,276,	0,2011,
#Partially deleted in new
chr6	100508193	100881364	chr6:100508193-100881364	3	-	100509385	100867997	789624	42	1340,176,210,148,152,225,135,112,126,133,121,138,143,121,146,167,86,221,169,99,155,226,177,87,165,120,225,192,135,72,177,165,141,201,126,142,205,121,560,151,131,304,	0,1738,4515,7986,9797,31969,81440,81754,93616,97374,98546,98757,116998,119396,119648,120821,122934,130407,134387,135837,138421,139032,142344,143366,144531,147505,153612,154151,171424,207268,209881,217345,258371,258951,290519,291237,292106,297566,339954,355870,359714,372867,
#Partially deleted in new
chr6	100509217	100510308	chr6:100509217-100510308	0	-	100509217	100509217	8553170	2	316,377,	0,714,
#Partially deleted in new
chr6	100530275	100531052	chr6:100530275-100531052	7	+	100530275	100530275	16724991	1	777,	0,
#Partially deleted in new
chr6	100647287	100881372	chr6:100647287-100881372	0	-	100848650	100867997	789624	20	164,177,87,165,120,225,192,135,72,177,165,141,201,126,142,205,121,560,131,312,	0,3250,4272,5437,8411,14518,15057,32330,68174,70787,78251,119277,119857,151425,152143,153012,158472,200860,220620,233773,
#Partially deleted in new
chr6	100715129	100881364	chr6:100715129-100881364	1	-	100715416	100867997	789624	13	404,177,165,141,201,126,142,205,121,560,151,131,304,	0,2945,10409,51435,52015,83583,84301,85170,90630,133018,148934,152778,165931,
#Partially deleted in new
chr6	100848003	100881301	chr6:100848003-100881301	0	-	100848003	100848003	8553170	4	704,151,131,241,	0,16060,19904,33057,
#Partially deleted in new
chr6	100848419	100881348	chr6:100848419-100881348	0	-	100848419	100867997	789624	4	288,151,125,288,	0,15644,19488,32641,
#Partially deleted in new
chr6	100856302	100881311	chr6:100856302-100881311	1	-	100859107	100867997	789624	4	2900,151,131,251,	0,7761,11605,24758,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	100881470	100882987	chr6:100881470-100882987	3	+	100881470	100881470	8553170	1	1517,	0,
#Partially deleted in new
chr6	100889602	100890338	chr6:100889602-100890338	7	+	100889602	100889602	16724991	1	736,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr6	101181256	102070083	chr6:101181256-102070083	3	+	101399277	102068511	0	19	116,67,27,408,168,258,182,54,174,144,108,114,207,224,119,218,226,251,1737,	0,23820,63373,217728,440692,445123,495366,501296,504923,618391,621074,637113,678030,708383,743344,747158,854084,874073,887090,
#Partially deleted in new
chr6	101398787	102070083	chr6:101398787-102070083	1	+	101399277	102065913	0	17	605,168,258,182,54,174,144,108,114,207,224,119,218,226,251,132,1737,	0,223161,227592,277835,283765,287392,400860,403543,419582,460499,490852,525813,529627,636553,656542,667009,669559,
#Partially deleted in new
chr6	101398787	102070083	chr6:101398787-102070083	1	+	101399277	102064009	0	17	605,168,258,182,54,174,144,108,114,207,224,119,218,226,251,87,1737,	0,223161,227592,277835,283765,287392,400860,403543,419582,460499,490852,525813,529627,636553,656542,665174,669559,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	101398792	101745143	chr6:101398792-101745143	1	+	101399277	101744709	789624	7	600,168,258,182,54,174,545,	0,223156,227587,277830,283760,287387,345806,
#Deleted in new
chr6	101430410	101431553	chr6:101430410-101431553	7	-	101430410	101430410	16724991	1	1143,	0,
#Partially deleted in new
chr6	101621947	102070083	chr6:101621947-102070083	1	+	101621947	102065913	789624	16	169,258,182,54,174,144,108,114,207,224,119,218,226,251,132,1737,	0,4432,54675,60605,64232,177700,180383,196422,237339,267692,302653,306467,413393,433382,443849,446399,
#Partially deleted in new
chr6	101621947	102070083	chr6:101621947-102070083	1	+	101621947	102068511	789624	15	169,258,182,54,174,144,108,114,207,224,119,218,226,251,1737,	0,4432,54675,60605,64232,177700,180383,196422,237339,267692,302653,306467,413393,433382,446399,
#Partially deleted in new
chr6	101621947	102070083	chr6:101621947-102070083	1	+	101621947	102064009	789624	16	169,258,182,54,174,144,108,114,207,224,119,218,226,251,87,1737,	0,4432,54675,60605,64232,177700,180383,196422,237339,267692,302653,306467,413393,433382,442014,446399,
#Partially deleted in new
chr6	101676768	101859370	chr6:101676768-101859370	0	+	101676768	101859370	789624	6	36,54,144,108,114,84,	0,5784,122879,125562,141601,182518,
#Partially deleted in new
chr6	101818369	101890384	chr6:101818369-101890384	0	+	101818369	101889867	789624	3	114,207,745,	0,40917,71270,
#Partially deleted in new
chr6	101927778	101993842	chr6:101927778-101993842	0	+	101927778	101927778	8553170	2	854,664,	0,65400,
#Partially deleted in new
chr6	101928142	102035541	chr6:101928142-102035541	0	+	101928142	101928142	8553170	2	490,201,	0,107198,
#Deleted in new
chr6	102078871	102079555	chr6:102078871-102079555	7	+	102078871	102078871	16724991	1	684,	0,
#Deleted in new
chr6	102453366	102453792	chr6:102453366-102453792	7	-	102453366	102453366	16724991	1	426,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	103002513	103003897	chr6:103002513-103003897	7	+	103002513	103002513	16724991	1	1384,	0,
#Partially deleted in new
chr6	103583134	103583268	chr6:103583134-103583268	3	+	103583134	103583134	8553170	1	134,	0,
#Deleted in new
chr6	104017632	104019748	chr6:104017632-104019748	7	-	104017632	104017632	16724991	1	2116,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	104025539	104026763	chr6:104025539-104026763	7	-	104025539	104025539	16724991	2	713,152,	0,1072,
#Deleted in new
chr6	104687240	104687671	chr6:104687240-104687671	7	+	104687240	104687240	16724991	1	431,	0,
#Partially deleted in new
chr6	104728092	104859919	chr6:104728092-104859919	3	-	104729661	104859642	789624	24	1672,114,71,99,132,197,150,88,98,112,88,69,335,151,107,102,97,83,132,76,105,90,55,353,	0,2210,16067,16419,22248,43100,43832,48648,48920,49113,55993,56324,56892,63411,67486,68562,68836,83218,104949,115130,121049,122814,124224,131474,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	104728094	104787414	chr6:104728094-104787414	0	-	104728094	104728094	8553170	13	1670,114,71,99,132,197,150,88,98,112,88,69,2430,	0,2208,16065,16417,22246,43098,43830,48646,48918,49111,55991,56322,56890,
#Partially deleted in new
chr6	104728096	104782455	chr6:104728096-104782455	0	-	104728096	104728096	8553170	11	1668,114,71,99,132,197,150,88,85,112,93,	0,2206,16063,16415,22244,43096,43828,48644,48916,49109,54266,
#Partially deleted in new
chr6	104728921	104859919	chr6:104728921-104859919	1	-	104729661	104859642	789624	19	843,114,71,99,132,88,69,335,151,107,102,97,83,132,76,105,90,55,353,	0,1381,15238,15590,21419,55164,55495,56063,62582,66657,67733,68007,82389,104120,114301,120220,121985,123395,130645,
#Partially deleted in new
chr6	104729041	104777091	chr6:104729041-104777091	0	-	104729661	104777091	789624	8	723,114,71,99,197,150,88,79,	0,1261,15118,15470,42151,42883,47699,47971,
#Partially deleted in new
chr6	104729041	104784098	chr6:104729041-104784098	0	-	104729661	104784098	789624	10	723,114,14,99,197,150,88,98,112,13,	0,1261,15118,15470,42151,42883,47699,47971,48164,55044,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	104729169	104732370	chr6:104729169-104732370	0	-	104729169	104729169	8553170	2	595,2068,	0,1133,
#Partially deleted in new
chr6	104729317	104785198	chr6:104729317-104785198	0	-	104777053	104785198	789624	13	447,114,71,99,132,197,150,88,85,112,88,69,214,	0,985,14842,15194,21023,41875,42607,47423,47695,47888,54768,55099,55667,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	104766821	104766926	chr6:104766821-104766926	3	+	104766821	104766821	8553170	1	105,	0,
#Partially deleted in new
chr6	104796716	104859879	chr6:104796716-104859879	0	-	104796716	104859642	789624	8	40,97,83,76,105,90,55,313,	0,212,14594,46506,52425,54190,55600,62850,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	104831128	104845820	chr6:104831128-104845820	3	-	104831128	104831128	8553170	3	196,8,50,	0,11217,14642,
#Partially deleted in new
chr6	104833059	104859560	chr6:104833059-104859560	0	-	104833059	104852345	789624	6	114,76,105,90,55,182,	0,10163,16082,17847,19257,26319,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	104843222	104859604	chr6:104843222-104859604	0	-	104858495	104859604	789624	7	76,105,90,55,139,58,38,	0,5919,7684,9094,15171,16156,16344,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	104860448	104862123	chr6:104860448-104862123	7	+	104860448	104860448	16724991	1	1675,	0,
#Partially deleted in new
chr6	104864463	104941447	chr6:104864463-104941447	3	-	104864463	104864463	8553170	5	103,49,299,36,123,	0,575,62120,75714,76861,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	104902555	104941062	chr6:104902555-104941062	0	-	104902555	104902555	8553170	4	130,299,36,83,	0,24028,37622,38424,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	104935205	104941263	chr6:104935205-104941263	1	-	104935205	104935205	8553170	3	1477,36,284,	0,4972,5774,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	104936119	104941050	chr6:104936119-104941050	1	-	104936119	104936119	8553170	4	563,209,36,71,	0,3208,4058,4860,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	104936293	104940527	chr6:104936293-104940527	0	-	104936293	104936293	789624	3	389,36,150,	0,3884,4084,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	104936615	105078602	chr6:104936615-105078602	0	+	104937098	105078602	789624	6	34,267,49,188,185,189,	0,234,13845,21483,89682,141798,
#Partially deleted in new
chr6	104940865	105080479	chr6:104940865-105080479	1	+	104950475	105078783	789624	5	147,49,188,185,2066,	0,9595,17233,85432,137548,
#Partially deleted in new
chr6	104957047	105083332	chr6:104957047-105083332	3	+	104957250	105078783	0	4	213,188,185,4919,	0,1051,69250,121366,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	105045561	105045668	chr6:105045561-105045668	3	-	105045561	105045561	8553170	1	107,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	105096821	105137174	chr6:105096821-105137174	3	-	105101088	105133577	789624	8	4392,142,168,109,188,125,237,206,	0,18864,19879,27725,28569,32557,36530,40147,
#Partially deleted in new
chr6	105100612	105136685	chr6:105100612-105136685	1	-	105101088	105133577	789624	8	601,142,168,109,188,125,237,93,	0,15073,16088,23934,24778,28766,32739,35980,
#Partially deleted in new
chr6	105100830	105136348	chr6:105100830-105136348	1	-	105101088	105133577	789624	8	383,142,168,109,188,125,237,148,	0,14855,15870,23716,24560,28548,32521,35370,
#Partially deleted in new
chr6	105136307	105168901	chr6:105136307-105168901	0	+	105136307	105136307	8553170	5	325,154,105,98,171,	0,1462,10968,18086,32423,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	105137266	105169917	chr6:105137266-105169917	3	+	105137266	105137266	8553170	6	45,154,105,98,159,1187,	0,503,10009,17127,29277,31464,
#Partially deleted in new
chr6	105137290	105168983	chr6:105137290-105168983	0	+	105137290	105137290	8553170	5	188,154,105,98,245,	0,479,9985,17103,31448,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	105137686	105169945	chr6:105137686-105169945	0	+	105137686	105137686	789624	4	237,105,159,1215,	0,9589,28857,31044,
#Partially deleted in new
chr6	105137822	105159037	chr6:105137822-105159037	0	+	105137822	105137822	8553170	4	101,105,98,20,	0,9453,16571,21195,
#Partially deleted in new
chr6	105158279	105179860	chr6:105158279-105179860	3	-	105158469	105161909	789624	4	472,109,736,28,	0,1431,3145,21553,
#Partially deleted in new
chr6	105158299	105163765	chr6:105158299-105163765	0	-	105158299	105158299	8553170	4	452,109,365,99,	0,1411,3496,5367,
#Partially deleted in new
chr6	105158359	105179995	chr6:105158359-105179995	0	-	105158359	105158359	8553170	4	392,109,365,163,	0,1351,3436,21473,
#Deleted in new
chr6	105158580	105160121	chr6:105158580-105160121	0	-	105158580	105159842	789624	2	171,411,	0,1130,
#Deleted in new
chr6	105273219	105273760	chr6:105273219-105273760	3	-	105273219	105273219	8553170	1	541,	0,
#Partially deleted in new
chr6	105277564	105403084	chr6:105277564-105403084	3	-	105278143	105402891	0	15	874,157,132,95,137,104,198,192,106,122,210,131,134,75,238,	0,4181,4886,7921,11193,46100,51264,55749,75407,91338,95804,98560,99821,120288,125282,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	105279015	105281755	chr6:105279015-105281755	3	+	105279015	105279015	8553170	2	63,1135,	0,1605,
#Partially deleted in new
chr6	105298148	105298895	chr6:105298148-105298895	7	+	105298148	105298148	16724991	1	747,	0,
#Partially deleted in new
chr6	105302452	105302823	chr6:105302452-105302823	7	-	105302452	105302452	16724991	1	371,	0,
#Deleted in new
chr6	105322254	105323768	chr6:105322254-105323768	0	-	105323078	105323768	789624	2	857,104,	0,1410,
#Partially deleted in new
chr6	105612666	105632196	chr6:105612666-105632196	3	-	105612666	105612666	8553170	6	126,129,87,58,128,61,	0,6667,8821,10064,17234,19469,
#Deleted in new
chr6	105666325	105667998	chr6:105666325-105667998	7	+	105666325	105666325	16724991	1	1673,	0,
#Partially deleted in new
chr6	105679377	105893041	chr6:105679377-105893041	3	-	105679377	105679377	8553170	4	114,137,128,16,	0,150679,205648,213648,
#Partially deleted in new
chr6	105864233	105893041	chr6:105864233-105893041	1	-	105864233	105864233	8553170	3	510,128,16,	0,20792,28792,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	105904372	105904687	chr6:105904372-105904687	3	+	105904372	105904372	8553170	1	315,	0,
#Partially deleted in new
chr6	106045422	106325762	chr6:106045422-106325762	1	-	106046820	106316102	789624	7	1403,118,95,163,79,166,237,	0,156549,202727,234238,247605,270678,280103,
#Partially deleted in new
chr6	106046570	106325678	chr6:106046570-106325678	0	-	106078292	106316102	789624	9	255,129,61,118,95,163,79,166,153,	0,25512,31684,155401,201579,233090,246457,269530,278955,
#Partially deleted in new
chr6	106086319	106107508	chr6:106086319-106107508	1	+	106088266	106107486	0	7	154,249,120,253,1109,129,598,	0,1881,9295,12980,18505,20051,20591,
#Partially deleted in new
chr6	106086319	106109938	chr6:106086319-106109938	3	+	106086553	106107486	0	7	276,249,120,253,1109,129,3028,	0,1881,9295,12980,18505,20051,20591,
#Partially deleted in new
chr6	106087579	106095620	chr6:106087579-106095620	0	+	106088266	106095620	789624	3	328,249,6,	0,621,8035,
#Partially deleted in new
chr6	106087586	106108282	chr6:106087586-106108282	1	+	106087846	106107486	8553170	7	344,249,120,253,1109,129,1372,	0,614,8028,11713,17238,18784,19324,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	106088353	106096167	chr6:106088353-106096167	0	+	106088353	106088353	8553170	2	96,553,	0,7261,
#Partially deleted in new
chr6	106098605	106105038	chr6:106098605-106105038	0	+	106098673	106105038	789624	3	116,253,214,	0,694,6219,
#Deleted in new
chr6	106098924	106099709	chr6:106098924-106099709	0	+	106098924	106098924	8553170	2	170,410,	0,375,
#Partially deleted in new
chr6	106098939	106109939	chr6:106098939-106109939	1	+	106099085	106107486	0	5	155,253,1109,129,3029,	0,360,5885,7431,7971,
#Deleted in new
chr6	106100139	106100593	chr6:106100139-106100593	3	+	106100139	106100139	8553170	1	454,	0,
#Partially deleted in new
chr6	106184475	106325417	chr6:106184475-106325417	1	-	106186539	106316208	0	8	2201,118,95,163,79,128,166,142,	0,17496,63674,95185,108552,123888,131625,140800,
#Partially deleted in new
chr6	106184475	106325657	chr6:106184475-106325657	1	-	106202016	106316208	789624	5	2201,118,95,166,132,	0,17496,63674,131625,141050,
#Partially deleted in new
chr6	106184475	106325791	chr6:106184475-106325791	0	-	106293079	106316208	789624	7	2201,118,95,163,79,166,266,	0,17496,63674,95185,108552,131625,141050,
#Partially deleted in new
chr6	106184475	106325791	chr6:106184475-106325791	3	-	106186539	106316208	0	8	2201,118,95,163,79,128,166,266,	0,17496,63674,95185,108552,123888,131625,141050,
#Partially deleted in new
chr6	106184475	106202429	chr6:106184475-106202429	0	-	106184475	106184475	8553170	2	2201,458,	0,17496,
#Partially deleted in new
chr6	106184475	106325738	chr6:106184475-106325738	1	-	106186539	106316102	0	7	2201,118,95,163,79,166,213,	0,17496,63674,95185,108552,131625,141050,
#Partially deleted in new
chr6	106185941	106325791	chr6:106185941-106325791	0	-	106217472	106316208	789624	9	735,118,138,95,163,79,128,166,266,	0,16030,31522,62208,93719,107086,122422,130159,139584,
#Partially deleted in new
chr6	106186539	106316208	chr6:106186539-106316208	1	-	106202078	106316208	789624	6	137,118,163,79,128,108,	0,15432,93121,106488,121824,129561,
#Partially deleted in new
chr6	106201745	106279823	chr6:106201745-106279823	0	-	106201745	106201745	8553170	3	344,95,163,	0,46404,77915,
#Deleted in new
chr6	106271633	106271720	chr6:106271633-106271720	3	+	106271633	106271633	8553170	1	87,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	106283412	106283711	chr6:106283412-106283711	3	-	106283412	106283412	8553170	1	299,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	106304175	106304286	chr6:106304175-106304286	3	+	106304175	106304175	8553170	1	111,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	106358565	106359717	chr6:106358565-106359717	3	-	106358565	106358565	8553170	2	214,200,	0,952,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr6	106360807	106571978	chr6:106360807-106571978	1	+	106360908	106568566	789624	22	274,139,1610,2323,48,119,166,140,127,36,158,127,146,127,33,113,130,140,124,159,163,3507,	0,90886,150622,158323,164325,164460,166497,169368,178595,180778,182632,183763,183980,191044,191376,192647,194960,197678,199995,200534,202956,207664,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	106420705	106420807	chr6:106420705-106420807	3	+	106420705	106420705	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	106449380	106449497	chr6:106449380-106449497	7	+	106449380	106449380	16724991	1	117,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	106451495	106457248	chr6:106451495-106457248	3	-	106451495	106451495	789624	2	320,95,	0,5658,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	106454827	106454929	chr6:106454827-106454929	3	+	106454827	106454827	8553170	1	102,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr6	106511854	106570460	chr6:106511854-106570460	3	+	106512341	106568566	0	20	1185,2323,48,119,166,140,127,36,158,127,146,127,33,113,130,140,124,159,163,1989,	0,7276,13278,13413,15450,18321,27548,29731,31585,32716,32933,39997,40329,41600,43913,46631,48948,49487,51909,56617,
#Partially deleted in new
chr6	106541133	106555897	chr6:106541133-106555897	0	+	106541217	106555897	789624	9	162,36,158,127,146,127,33,113,130,	0,452,2306,3437,3654,10718,11050,12321,14634,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	106544583	106552314	chr6:106544583-106552314	0	+	106544583	106544583	8553170	3	114,146,463,	0,204,7268,
#Partially deleted in new
chr6	106571970	106629487	chr6:106571970-106629487	3	-	106571995	106629021	0	9	133,93,184,137,49,125,69,152,740,	0,11357,15708,20193,30903,47231,49454,50847,56777,
#Partially deleted in new
chr6	106571974	106583631	chr6:106571974-106583631	0	-	106571974	106571974	8553170	2	129,304,	0,11353,
#Partially deleted in new
chr6	106571976	106572411	chr6:106571976-106572411	0	-	106571976	106571976	8553170	2	127,81,	0,354,
#Partially deleted in new
chr6	106572002	106629021	chr6:106572002-106629021	1	-	106583359	106629021	789624	6	101,93,125,69,152,274,	0,11325,47199,49422,50815,56745,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	106607715	106607819	chr6:106607715-106607819	3	+	106607715	106607715	8553170	1	104,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	106629577	106668417	chr6:106629577-106668417	3	+	106629681	106666002	789624	11	128,160,99,97,177,176,116,193,118,206,2636,	0,10771,11245,13416,19447,22631,22889,25152,26037,33402,36204,
#Partially deleted in new
chr6	106629598	106640862	chr6:106629598-106640862	0	+	106629598	106629598	8553170	4	107,106,160,40,	0,10502,10750,11224,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	106629613	106653823	chr6:106629613-106653823	1	+	106629681	106652693	789624	7	92,160,99,97,177,176,1357,	0,10735,11209,13380,19411,22595,22853,
#Deleted in new
chr6	106642462	106642928	chr6:106642462-106642928	7	+	106642462	106642462	16724991	1	466,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	106695534	106699994	chr6:106695534-106699994	3	+	106695534	106695534	8553170	3	140,126,153,	0,740,4307,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	106717451	106787425	chr6:106717451-106787425	0	-	106717451	106717451	789624	7	791,94,48,96,121,70,167,	0,7115,7890,16530,17846,22249,69807,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	106717451	106746004	chr6:106717451-106746004	1	-	106717451	106717451	8553170	6	791,94,92,121,70,1064,	0,7115,16530,17846,22249,27489,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	106717455	106787534	chr6:106717455-106787534	3	-	106717455	106717455	8553170	9	787,94,48,140,96,121,70,157,276,	0,7111,7886,8906,16526,17842,22245,38649,69803,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	106717991	106787431	chr6:106717991-106787431	0	-	106717991	106717991	8553170	6	251,94,96,121,70,173,	0,6575,15990,17306,21709,69267,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	106724614	106740087	chr6:106724614-106740087	0	-	106724614	106724614	8553170	4	46,96,121,387,	0,9367,10683,15086,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	106735044	106739775	chr6:106735044-106739775	0	-	106735044	106735044	8553170	2	374,75,	0,4656,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	106738947	106739054	chr6:106738947-106739054	3	-	106738947	106738947	8553170	1	107,	0,
#Partially deleted in new
chr6	106747084	106772293	chr6:106747084-106772293	0	-	106747084	106747084	8553170	2	204,56,	0,25153,
#Partially deleted in new
chr6	106747089	106787474	chr6:106747089-106787474	1	-	106747089	106747089	8553170	3	199,155,216,	0,2544,40169,
#Partially deleted in new
chr6	106747249	106787435	chr6:106747249-106787435	0	-	106747249	106747249	8553170	4	39,155,157,177,	0,2384,8855,40009,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	106754399	106787541	chr6:106754399-106787541	1	-	106754399	106754399	8553170	4	23,121,157,283,	0,1470,1705,32859,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	106770125	106775004	chr6:106770125-106775004	1	-	106770125	106770125	8553170	2	2236,228,	0,4651,
#Partially deleted in new
chr6	106772117	106787479	chr6:106772117-106787479	1	-	106772117	106772117	8553170	4	244,17,146,221,	0,2659,2737,15141,
#Partially deleted in new
chr6	106774460	106782467	chr6:106774460-106782467	0	-	106774460	106774460	8553170	2	540,33,	0,7974,
#Deleted in new
chr6	106784124	106784220	chr6:106784124-106784220	3	+	106784124	106784124	5263520	1	96,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	106969830	106975465	chr6:106969830-106975465	3	-	106971660	106974646	789624	3	2004,177,332,	0,4747,5303,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	106969832	106974755	chr6:106969832-106974755	1	-	106971660	106974646	789624	2	2002,178,	0,4745,
#Deleted in new
chr6	106971002	106975327	chr6:106971002-106975327	0	-	106971660	106975327	789624	2	832,194,	0,4131,
#Deleted in new
chr6	106971093	106974732	chr6:106971093-106974732	1	-	106971479	106974646	789624	2	431,155,	0,3484,
#Deleted in new
chr6	106971359	106975459	chr6:106971359-106975459	0	-	106971660	106975459	789624	2	475,91,	0,4009,
#Deleted in new
chr6	106971379	106974039	chr6:106971379-106974039	1	-	106971660	106973885	789624	2	455,370,	0,2290,
#Deleted in new
chr6	106971468	106975627	chr6:106971468-106975627	1	-	106971660	106974646	789624	3	366,177,259,	0,3109,3900,
#Deleted in new
chr6	106973386	106975162	chr6:106973386-106975162	0	-	106973386	106973386	8553170	3	51,177,29,	0,1191,1747,
#Partially deleted in new
chr6	107028212	107051342	chr6:107028212-107051342	3	+	107039760	107051236	789624	4	59,482,73,286,	0,11536,16047,22844,
#Partially deleted in new
chr6	107028212	107051336	chr6:107028212-107051336	1	+	107039760	107051236	789624	4	585,482,73,280,	0,11536,16047,22844,
#Partially deleted in new
chr6	107028568	107051335	chr6:107028568-107051335	1	+	107030104	107051236	789624	5	229,83,482,73,279,	0,1456,11180,15691,22488,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	107039991	107040907	chr6:107039991-107040907	0	+	107039991	107039991	8553170	2	239,527,	0,389,
#Partially deleted in new
chr6	107065181	107115269	chr6:107065181-107115269	3	-	107068703	107099285	0	4	5769,203,48,180,	0,33369,34067,49908,
#Partially deleted in new
chr6	107065186	107114432	chr6:107065186-107114432	1	-	107068703	107099285	0	5	5764,203,48,86,553,	0,33364,34062,40890,48693,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	107133070	107133170	chr6:107133070-107133170	3	+	107133070	107133070	8553170	1	100,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	107152556	107459563	chr6:107152556-107459563	3	-	107154618	107459285	789624	8	2221,33,132,174,72,199,135,574,	0,41265,57882,59552,92991,121472,181641,306433,
#Deleted in new
chr6	107192299	107192573	chr6:107192299-107192573	7	+	107192299	107192299	16724991	1	274,	0,
#Partially deleted in new
chr6	107197840	107212159	chr6:107197840-107212159	0	-	107197840	107212159	789624	3	58,132,51,	0,12598,14268,
#Deleted in new
chr6	107229758	107230152	chr6:107229758-107230152	7	+	107229758	107229758	16724991	1	394,	0,
#Partially deleted in new
chr6	107264185	107459564	chr6:107264185-107459564	1	-	107264419	107459285	789624	4	327,199,135,575,	0,9843,70012,194804,
#Partially deleted in new
chr6	107489957	107660167	chr6:107489957-107660167	3	+	107490616	107635466	789624	7	755,139,186,152,96,1956,1961,	0,13699,16284,43501,97122,143556,168249,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	107490105	107558287	chr6:107490105-107558287	0	+	107490105	107490105	8553170	5	607,139,186,152,451,	0,13551,16136,43353,67731,
#Partially deleted in new
chr6	107490603	107515073	chr6:107490603-107515073	1	+	107490616	107513986	789624	4	109,139,186,1116,	0,13053,15638,23354,
#Partially deleted in new
chr6	107509802	107511721	chr6:107509802-107511721	3	-	107509802	107509802	8553170	2	63,266,	0,1653,
#Partially deleted in new
chr6	107509802	107511436	chr6:107509802-107511436	1	-	107509802	107509802	8553170	3	63,219,56,	0,747,1578,
#Deleted in new
chr6	107634989	107636316	chr6:107634989-107636316	0	+	107634989	107634989	8553170	2	480,92,	0,1235,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	107697298	107700218	chr6:107697298-107700218	3	-	107697298	107697298	8553170	1	2920,	0,
#Partially deleted in new
chr6	107704103	107824317	chr6:107704103-107824317	1	-	107705199	107749795	789624	7	1222,146,291,195,201,130,192,	0,3762,16599,40845,42585,45580,120022,
#Partially deleted in new
chr6	107704650	107732395	chr6:107704650-107732395	1	-	107705199	107720949	789624	4	675,146,291,422,	0,3215,16052,27323,
#Partially deleted in new
chr6	107705199	107824312	chr6:107705199-107824312	3	-	107705199	107772327	789624	8	126,146,291,195,201,130,215,187,	0,2666,15503,39749,41489,44484,66972,118926,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	107718444	107732103	chr6:107718444-107732103	0	-	107718444	107718444	8553170	2	2549,130,	0,13529,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	107718953	107772251	chr6:107718953-107772251	1	-	107720670	107755639	789624	7	92,1264,195,201,130,94,80,	0,776,25995,27735,30730,36617,53218,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	107718954	107824312	chr6:107718954-107824312	0	-	107718954	107718954	8553170	4	2039,1941,130,187,	0,25994,30729,105171,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	107719729	107772251	chr6:107719729-107772251	0	-	107719729	107719729	8553170	6	1264,195,201,130,94,80,	0,25219,26959,29954,35841,52442,
#Partially deleted in new
chr6	107720670	107824294	chr6:107720670-107824294	0	-	107720670	107720670	8553170	6	323,195,201,130,94,169,	0,24278,26018,29013,34900,103455,
#Partially deleted in new
chr6	107720708	107744054	chr6:107720708-107744054	0	-	107720708	107720708	8553170	2	285,113,	0,23233,
#Partially deleted in new
chr6	107740064	107824286	chr6:107740064-107824286	0	-	107740148	107749795	789624	5	92,195,201,130,161,	0,4884,6624,9619,84061,
#Partially deleted in new
chr6	107744948	107772251	chr6:107744948-107772251	0	-	107744948	107755639	789624	5	195,201,130,94,80,	0,1740,4735,10622,27223,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr6	107867755	107958189	chr6:107867755-107958189	3	-	107871703	107958009	789624	21	4092,105,99,102,159,174,60,83,148,155,93,133,95,109,51,59,62,113,115,100,304,	0,5052,8808,13393,15232,25726,26082,29893,33614,35088,36873,38692,38927,41171,43590,44960,45610,54041,57062,61659,90130,
#Partially deleted in new
chr6	107870764	107877400	chr6:107870764-107877400	0	-	107870764	107870764	8553170	3	1083,105,837,	0,2043,5799,
#Partially deleted in new
chr6	107872884	107883467	chr6:107872884-107883467	0	-	107872884	107872884	8553170	4	28,99,102,480,	0,3679,8264,10103,
#Deleted in new
chr6	107880959	107883112	chr6:107880959-107883112	0	-	107880959	107880959	8553170	2	291,125,	0,2028,
#Partially deleted in new
chr6	107893579	107902900	chr6:107893579-107902900	0	-	107893579	107893579	8553170	4	318,83,148,57,	0,4069,7790,9264,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	107906464	107909159	chr6:107906464-107909159	0	-	107906464	107906464	8553170	3	116,95,233,	0,218,2462,
#Partially deleted in new
chr6	107909007	107957340	chr6:107909007-107957340	0	-	107909007	107929470	789624	8	28,51,59,62,113,115,100,119,	0,2338,3708,4358,12789,15810,20407,48214,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	107911167	107957931	chr6:107911167-107957931	0	-	107911167	107911167	8553170	7	229,59,62,113,115,100,46,	0,1548,2198,10629,13650,18247,46718,
#Partially deleted in new
chr6	107924817	107958111	chr6:107924817-107958111	0	-	107955987	107958009	789624	4	115,100,142,226,	0,4597,31147,33068,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	107930087	107930182	chr6:107930087-107930182	3	+	107930087	107930087	8553170	1	95,	0,
#Deleted in new
chr6	107931799	107932254	chr6:107931799-107932254	7	+	107931799	107931799	16724991	1	455,	0,
#Partially deleted in new
chr6	107954583	107958042	chr6:107954583-107958042	0	-	107954583	107954583	8553170	3	183,142,157,	0,1381,3302,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	107957412	107959986	chr6:107957412-107959986	3	+	107957412	107957412	8553170	1	2574,	0,
#Partially deleted in new
chr6	107985088	107985690	chr6:107985088-107985690	7	-	107985088	107985088	16724991	2	211,63,	0,539,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	107985658	107985773	chr6:107985658-107985773	3	-	107985658	107985658	8553170	1	115,	0,
#Partially deleted in new
chr6	107985810	107986031	chr6:107985810-107986031	7	-	107985810	107985810	16724991	1	221,	0,
#Partially deleted in new
chr6	108004356	108005568	chr6:108004356-108005568	7	-	108004356	108004356	16724991	1	1212,	0,
#Partially deleted in new
chr6	108030248	108030718	chr6:108030248-108030718	3	-	108030248	108030248	8553170	1	470,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	108041408	108074737	chr6:108041408-108074737	3	-	108044784	108074651	789624	6	3432,166,168,98,115,488,	0,7844,9622,13081,22776,32841,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	108041471	108044238	chr6:108041471-108044238	0	-	108041471	108041471	8553170	2	793,1672,	0,1095,
#Partially deleted in new
chr6	108044378	108051066	chr6:108044378-108051066	0	-	108044378	108044378	8553170	4	462,166,52,36,	0,4874,5153,6652,
#Partially deleted in new
chr6	108044732	108049668	chr6:108044732-108049668	0	-	108044732	108044732	8553170	3	108,166,137,	0,4520,4799,
#Partially deleted in new
chr6	108044830	108165840	chr6:108044830-108165840	0	-	108044830	108064260	789624	7	10,166,168,98,115,138,29,	0,4422,6200,9659,19354,120736,120981,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	108060817	108060930	chr6:108060817-108060930	3	+	108060817	108060817	8553170	1	113,	0,
#Partially deleted in new
chr6	108064184	108074741	chr6:108064184-108074741	0	-	108064184	108064184	8553170	3	115,157,492,	0,9457,10065,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	108122335	108165854	chr6:108122335-108165854	0	-	108122335	108122335	8553170	3	379,138,43,	0,43231,43476,
#Partially deleted in new
chr6	108123514	108156698	chr6:108123514-108156698	0	+	108123514	108123514	8553170	2	220,497,	0,32687,
#Partially deleted in new
chr6	108123632	108159392	chr6:108123632-108159392	3	+	108123632	108123632	789624	2	143,3191,	0,32569,
#Partially deleted in new
chr6	108166057	108188809	chr6:108166057-108188809	3	+	108166765	108187463	0	9	733,146,88,236,147,97,150,106,1509,	0,5400,8778,10445,12037,14265,14749,15488,21243,
#Partially deleted in new
chr6	108168022	108188802	chr6:108168022-108188802	1	+	108168026	108187463	0	9	140,146,88,236,147,97,150,106,1502,	0,3435,6813,8480,10072,12300,12784,13523,19278,
#Deleted in new
chr6	108168762	108176626	chr6:108168762-108176626	0	+	108174910	108176626	789624	4	159,146,88,124,	0,2695,6073,7740,
#Deleted in new
chr6	108176103	108178147	chr6:108176103-108178147	0	+	108176103	108176103	8553170	3	222,236,53,	0,399,1991,
#Deleted in new
chr6	108178870	108179317	chr6:108178870-108179317	3	+	108178870	108178870	8553170	1	447,	0,
#Partially deleted in new
chr6	108211221	108261260	chr6:108211221-108261260	3	-	108212148	108260921	0	4	1033,125,96,501,	0,3276,11728,49538,
#Partially deleted in new
chr6	108211512	108261246	chr6:108211512-108261246	0	-	108222236	108260921	0	5	742,125,87,96,487,	0,2985,10721,11437,49247,
#Partially deleted in new
chr6	108211512	108260964	chr6:108211512-108260964	1	-	108212148	108260921	0	3	742,125,205,	0,2985,49247,
#Partially deleted in new
chr6	108212004	108261244	chr6:108212004-108261244	1	-	108212148	108260921	0	4	250,125,96,419,	0,2493,10945,48821,
#Partially deleted in new
chr6	108252213	108252400	chr6:108252213-108252400	7	+	108252213	108252213	16724991	1	187,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	108252400	108252507	chr6:108252400-108252507	7	+	108252400	108252400	16724991	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	108275641	108276546	chr6:108275641-108276546	3	+	108275641	108275641	8553170	2	215,417,	0,488,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	108292765	108292869	chr6:108292765-108292869	3	+	108292765	108292765	8553170	1	104,	0,
#Partially deleted in new
chr6	108294893	108526001	chr6:108294893-108526001	3	+	108295079	108522425	789624	13	325,224,52,102,131,100,59,83,71,101,141,114,3705,	0,28931,52094,60760,61796,71339,107102,152320,181971,182298,215318,224803,227403,
#Partially deleted in new
chr6	108294990	108346990	chr6:108294990-108346990	0	+	108294990	108294990	8553170	4	228,224,87,3,	0,28834,49784,51997,
#Partially deleted in new
chr6	108295200	108523117	chr6:108295200-108523117	0	+	108295200	108522425	789624	11	18,102,131,100,59,83,71,101,141,114,821,	0,60453,61489,71032,106795,152013,181664,181991,215011,224496,227096,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	108295752	108356751	chr6:108295752-108356751	0	+	108319751	108356751	789624	6	127,175,224,52,102,62,	0,23864,28072,51235,59901,60937,
#Partially deleted in new
chr6	108318078	108318404	chr6:108318078-108318404	7	+	108318078	108318078	16724991	1	326,	0,
#Partially deleted in new
chr6	108356689	108522334	chr6:108356689-108522334	0	+	108356689	108447224	789624	8	131,100,83,71,101,141,114,38,	0,9543,90524,120175,120502,153522,163007,165607,
#Deleted in new
chr6	108359083	108359863	chr6:108359083-108359863	3	-	108359083	108359083	8553170	1	780,	0,
#Deleted in new
chr6	108372771	108372927	chr6:108372771-108372927	7	-	108372771	108372771	16724991	1	156,	0,
#Deleted in new
chr6	108387511	108388080	chr6:108387511-108388080	7	+	108387511	108387511	16724991	2	353,141,	0,428,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	108392072	108392177	chr6:108392072-108392177	3	+	108392072	108392072	8553170	1	105,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	108476978	108522465	chr6:108476978-108522465	0	+	108476978	108476978	8553170	2	314,2769,	0,42718,
#Deleted in new
chr6	108523136	108526796	chr6:108523136-108526796	0	+	108523136	108523136	8553170	2	428,154,	0,3506,
#Deleted in new
chr6	108551017	108551207	chr6:108551017-108551207	7	-	108551017	108551017	16724991	1	190,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	108559834	108684774	chr6:108559834-108684774	3	+	108561208	108664855	0	4	181,744,1435,4948,	0,1251,103620,119992,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	108560865	108684768	chr6:108560865-108684768	1	+	108561208	108664855	0	3	964,1435,4942,	0,102589,118961,
#Deleted in new
chr6	108617999	108618285	chr6:108617999-108618285	7	-	108617999	108617999	16724991	1	286,	0,
#Partially deleted in new
chr6	108656345	108680751	chr6:108656345-108680751	1	+	108663493	108664855	0	3	193,1435,925,	0,7109,23481,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	108751653	108768456	chr6:108751653-108768456	1	+	108751653	108751653	8553170	3	196,128,1461,	0,7764,15342,
#Partially deleted in new
chr6	108751653	108769118	chr6:108751653-108769118	0	+	108751653	108751653	8553170	4	196,128,102,169,	0,7764,8648,17296,
#Partially deleted in new
chr6	108751655	108769942	chr6:108751655-108769942	3	+	108751655	108751655	789624	5	194,128,102,1180,147,	0,7762,8646,16735,18140,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	108751817	108768456	chr6:108751817-108768456	1	+	108751817	108751817	8553170	5	32,128,102,274,66,	0,7600,8484,15178,16573,
#Partially deleted in new
chr6	108759160	108769118	chr6:108759160-108769118	0	+	108759160	108759160	8553170	4	163,128,102,206,	0,257,1141,9752,
#Partially deleted in new
chr6	108759164	108769118	chr6:108759164-108769118	0	+	108759164	108759164	8553170	4	159,128,102,728,	0,253,1137,9226,
#Partially deleted in new
chr6	108759460	108769005	chr6:108759460-108769005	0	+	108759460	108759460	8553170	3	85,102,140,	0,841,9405,
#Deleted in new
chr6	108782125	108787037	chr6:108782125-108787037	7	-	108782125	108782125	16724991	1	4912,	0,
#Deleted in new
chr6	108785688	108787053	chr6:108785688-108787053	5	-	108785688	108785688	16724991	1	1365,	0,
#Deleted in new
chr6	108817679	108817926	chr6:108817679-108817926	7	+	108817679	108817679	16724991	1	247,	0,
#Partially deleted in new
chr6	108848415	108974472	chr6:108848415-108974472	1	+	108876174	108973514	789624	17	131,261,172,208,77,99,176,103,224,146,100,319,123,114,133,161,1116,	0,5809,20408,27727,46051,51278,55814,62483,63919,79672,88484,104617,113156,113598,115764,116564,124941,
#Partially deleted in new
chr6	108848421	108973983	chr6:108848421-108973983	3	+	108854267	108973514	789624	18	125,261,73,172,208,77,99,176,103,224,146,100,319,123,114,133,161,627,	0,5803,9777,20402,27721,46045,51272,55808,62477,63913,79666,88478,104611,113150,113592,115758,116558,124935,
#Partially deleted in new
chr6	108848696	108876347	chr6:108848696-108876347	0	+	108854267	108876347	789624	5	125,261,73,172,205,	0,5528,9502,20127,27446,
#Partially deleted in new
chr6	108856399	108856737	chr6:108856399-108856737	7	-	108856399	108856399	16724991	1	338,	0,
#Partially deleted in new
chr6	108868977	108880256	chr6:108868977-108880256	0	+	108868977	108879958	789624	3	18,208,329,	0,7165,10950,
#Deleted in new
chr6	108907614	108907873	chr6:108907614-108907873	7	-	108907614	108907614	16724991	1	259,	0,
#Deleted in new
chr6	108922975	108924103	chr6:108922975-108924103	3	-	108922975	108922975	8553170	2	69,43,	0,1085,
#Partially deleted in new
chr6	108959459	108965117	chr6:108959459-108965117	0	+	108959459	108959459	8553170	5	60,123,114,133,138,	0,2112,2554,4720,5520,
#Partially deleted in new
chr6	108986436	109094819	chr6:108986436-109094819	3	-	108987543	109094073	789624	10	1194,145,191,113,148,243,183,201,66,1025,	0,2106,4208,6350,8025,12076,14054,14851,15841,107358,
#Partially deleted in new
chr6	108986441	109008988	chr6:108986441-109008988	1	-	108987543	109001458	789624	10	1189,145,191,113,148,243,183,201,66,239,	0,2101,4203,6345,8020,12071,14049,14846,15836,22308,
#Partially deleted in new
chr6	108986441	109009555	chr6:108986441-109009555	1	-	108987543	109009460	789624	10	1189,145,191,113,148,243,183,201,66,197,	0,2101,4203,6345,8020,12071,14049,14846,15836,22917,
#Partially deleted in new
chr6	108988362	108993016	chr6:108988362-108993016	0	-	108988362	108988362	8553170	3	325,191,230,	0,2282,4424,
#Partially deleted in new
chr6	108992818	108998875	chr6:108992818-108998875	0	-	108992818	108992818	8553170	3	81,148,363,	0,1643,5694,
#Deleted in new
chr6	108998481	108999125	chr6:108998481-108999125	3	+	108998481	108998481	8553170	1	644,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	108999938	109001472	chr6:108999938-109001472	0	-	108999938	108999938	8553170	2	735,185,	0,1349,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	109059508	109059614	chr6:109059508-109059614	3	-	109059508	109059508	8553170	1	106,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	109095109	109158488	chr6:109095109-109158488	1	+	109145221	109155889	789624	8	466,56,163,180,74,117,78,2698,	0,10925,50109,51648,55056,58723,60120,60681,
#Partially deleted in new
chr6	109095152	109163932	chr6:109095152-109163932	3	+	109145221	109162970	789624	11	423,163,180,122,117,78,87,78,194,145,1184,	0,50066,51605,54965,58680,60077,60638,63872,64116,65419,67596,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	109095157	109156793	chr6:109095157-109156793	1	+	109145221	109155889	789624	8	418,163,180,122,117,78,133,736,	0,50061,51600,54960,58675,60072,60633,60900,
#Partially deleted in new
chr6	109095184	109145307	chr6:109095184-109145307	0	+	109145221	109145307	789624	3	391,95,89,	0,5007,50034,
#Partially deleted in new
chr6	109095480	109163907	chr6:109095480-109163907	1	+	109145221	109162970	789624	10	95,163,180,122,117,78,78,122,145,1159,	0,49738,51277,54637,58352,59749,63544,63860,65091,67268,
#Partially deleted in new
chr6	109095509	109155301	chr6:109095509-109155301	0	+	109150191	109155301	789624	6	66,41,180,122,117,72,	0,29481,51248,54608,58323,59720,
#Partially deleted in new
chr6	109095509	109146933	chr6:109095509-109146933	0	+	109145221	109146933	789624	4	66,41,163,176,	0,29481,49709,51248,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	109095511	109155974	chr6:109095511-109155974	1	+	109145221	109155889	789624	7	64,163,180,122,117,78,184,	0,49707,51246,54606,58321,59718,60279,
#Partially deleted in new
chr6	109095519	109163163	chr6:109095519-109163163	1	+	109145221	109162749	789624	11	56,163,180,122,117,78,87,78,194,159,415,	0,49699,51238,54598,58313,59710,60271,63505,63749,65052,67229,
#Partially deleted in new
chr6	109095528	109163166	chr6:109095528-109163166	1	+	109145221	109162970	789624	11	47,163,180,122,117,78,87,78,245,145,418,	0,49690,51229,54589,58304,59701,60262,63496,63689,65043,67220,
#Partially deleted in new
chr6	109095543	109163907	chr6:109095543-109163907	1	+	109145221	109162970	789624	10	32,163,74,117,78,87,78,122,145,1159,	0,49675,54622,58289,59686,60247,63481,63797,65028,67205,
#Partially deleted in new
chr6	109095550	109159446	chr6:109095550-109159446	0	+	109095550	109095550	8553170	8	25,180,122,117,78,87,78,178,	0,51207,54567,58282,59679,60240,63474,63718,
#Partially deleted in new
chr6	109095561	109163903	chr6:109095561-109163903	1	+	109129486	109162970	789624	12	14,189,163,180,122,117,78,87,78,194,145,1155,	0,33742,49657,51196,54556,58271,59668,60229,63463,63707,65010,67187,
#Partially deleted in new
chr6	109129303	109163910	chr6:109129303-109163910	1	+	109145221	109162970	789624	11	189,163,180,122,117,78,87,78,194,145,1162,	0,15915,17454,20814,24529,25926,26487,29721,29965,31268,33445,
#Partially deleted in new
chr6	109155790	109160765	chr6:109155790-109160765	0	+	109155790	109160731	789624	4	87,78,194,194,	0,3234,3478,4781,
#Partially deleted in new
chr6	109165830	109239390	chr6:109165830-109239390	5	+	109165830	109165830	16724991	15	55,165,73,111,114,195,154,158,153,102,162,113,136,204,63,	0,18096,21805,22128,30654,31242,32528,33702,37884,40521,51394,60735,61228,61615,73497,
#Partially deleted in new
chr6	109165832	109355046	chr6:109165832-109355046	7	+	109165832	109165832	16724991	47	53,165,73,111,114,195,154,158,153,102,162,113,136,204,193,128,201,122,229,203,156,94,138,158,112,50,177,121,166,139,154,96,153,230,139,121,110,150,54,168,153,132,153,210,121,128,199,	0,18094,21803,22126,30652,31240,32526,33700,37882,40519,51392,60733,61226,61613,73495,76346,88615,89538,91713,96056,98968,101975,104206,116734,118634,120143,120509,128505,129694,134398,140126,142149,143669,148230,149447,151015,163170,170535,171563,172615,175069,175469,176566,178154,182594,186954,189015,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr6	109165832	109271014	chr6:109165832-109271014	4	+	109165832	109165832	16724991	23	53,165,73,111,114,195,154,158,153,102,162,113,136,204,193,128,201,122,229,203,156,94,976,	0,18094,21803,22126,30652,31240,32526,33700,37882,40519,51392,60733,61226,61613,73495,76346,88615,89538,91713,96056,98968,101975,104206,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	109236613	109271014	chr6:109236613-109271014	4	+	109236613	109236613	16724991	10	167,193,128,201,122,229,203,156,94,976,	0,2714,5565,17834,18757,20932,25275,28187,31194,33425,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	109285484	109306112	chr6:109285484-109306112	4	+	109285484	109285484	16724991	8	122,50,177,118,166,52,139,154,	0,491,857,8856,10042,13095,14746,20474,
#Deleted in new
chr6	109288439	109288562	chr6:109288439-109288562	7	+	109288439	109288439	16724991	1	123,	0,
#Partially deleted in new
chr6	109288570	109290503	chr6:109288570-109290503	7	-	109288570	109288570	16724991	2	105,801,	0,1132,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	109291027	109298629	chr6:109291027-109298629	4	+	109291027	109291027	16724991	4	399,118,166,50,	0,3313,4499,7552,
#Partially deleted in new
chr6	109294302	109308566	chr6:109294302-109308566	4	+	109294302	109294302	16724991	5	156,166,139,154,585,	0,1224,5928,11656,13679,
#Partially deleted in new
chr6	109294302	109308220	chr6:109294302-109308220	4	+	109294302	109294302	16724991	4	156,166,154,239,	0,1224,11656,13679,
#Partially deleted in new
chr6	109294308	109355046	chr6:109294308-109355046	4	+	109294308	109294308	16724991	20	150,166,139,154,96,153,230,139,121,110,150,54,168,153,132,153,210,121,128,199,	0,1218,5922,11650,13673,15193,19754,20971,22539,34694,42059,43087,44139,46593,46993,48090,49678,54118,58478,60539,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	109305493	109305595	chr6:109305493-109305595	3	+	109305493	109305493	8553170	1	102,	0,
#Deleted in new
chr6	109309269	109314195	chr6:109309269-109314195	4	+	109309269	109309269	16724991	2	385,133,	0,4793,
#Partially deleted in new
chr6	109309306	109336417	chr6:109309306-109336417	4	+	109309306	109309306	16724991	3	348,110,50,	0,19696,27061,
#Deleted in new
chr6	109327174	109327914	chr6:109327174-109327914	7	-	109327174	109327174	16724991	1	740,	0,
#Partially deleted in new
chr6	109338526	109343085	chr6:109338526-109343085	4	+	109338526	109338526	16724991	3	89,153,687,	0,2375,3872,
#Partially deleted in new
chr6	109343986	109355063	chr6:109343986-109355063	5	+	109343986	109343986	16724991	3	210,121,216,	0,4440,10861,
#Partially deleted in new
chr6	109343999	109355041	chr6:109343999-109355041	4	+	109343999	109343999	16724991	4	197,121,76,194,	0,4427,8839,10848,
#Deleted in new
chr6	109354162	109355039	chr6:109354162-109355039	4	+	109354162	109354162	16724991	2	374,192,	0,685,
#Partially deleted in new
chr6	109366513	109382812	chr6:109366513-109382812	3	-	109368850	109382378	789624	6	2504,57,39,72,84,609,	0,3897,9560,11386,13065,15690,
#Partially deleted in new
chr6	109366513	109382457	chr6:109366513-109382457	1	-	109368278	109382378	789624	7	1812,96,57,39,72,84,254,	0,2408,3897,9560,11386,13065,15690,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	109366513	109372869	chr6:109366513-109372869	0	-	109366513	109366513	8553170	2	2504,2459,	0,3897,
#Partially deleted in new
chr6	109366513	109381739	chr6:109366513-109381739	1	-	109368850	109381576	789624	6	2504,57,39,72,84,236,	0,3897,9560,11386,13065,14990,
#Partially deleted in new
chr6	109366517	109382444	chr6:109366517-109382444	1	-	109368850	109382378	789624	5	2500,57,72,84,241,	0,3893,11382,13061,15686,
#Partially deleted in new
chr6	109366517	109382444	chr6:109366517-109382444	1	-	109368850	109382378	789624	5	2500,39,72,84,241,	0,9556,11382,13061,15686,
#Partially deleted in new
chr6	109367278	109380516	chr6:109367278-109380516	0	-	109367278	109367278	8553170	5	1739,57,39,72,938,	0,3132,8795,10621,12300,
#Partially deleted in new
chr6	109367820	109382410	chr6:109367820-109382410	1	-	109368278	109382378	789624	6	505,57,39,72,84,207,	0,2590,8253,10079,11758,14383,
#Partially deleted in new
chr6	109368683	109381901	chr6:109368683-109381901	0	-	109368683	109368683	8553170	6	334,57,39,72,84,192,	0,1727,7390,9216,10895,13026,
#Partially deleted in new
chr6	109375886	109382411	chr6:109375886-109382411	0	-	109375886	109375886	8553170	4	226,72,84,208,	0,2013,3692,6317,
#Deleted in new
chr6	109382794	109383666	chr6:109382794-109383666	3	+	109382794	109382794	8553170	1	872,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	109390214	109441171	chr6:109390214-109441171	3	-	109392825	109440590	789624	8	2723,136,57,148,63,189,96,716,	0,9820,28972,36632,36879,40942,45889,50241,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	109390215	109441171	chr6:109390215-109441171	1	-	109392825	109440590	789624	7	2722,136,57,148,63,189,716,	0,9819,28971,36631,36878,40941,50240,
#Partially deleted in new
chr6	109392727	109441171	chr6:109392727-109441171	1	-	109392825	109440590	789624	9	210,136,78,57,148,63,189,96,716,	0,7307,10303,26459,34119,34366,38429,43376,47728,
#Partially deleted in new
chr6	109392836	109440504	chr6:109392836-109440504	0	-	109392929	109440504	789624	6	101,57,148,63,189,49,	0,26350,34010,34257,38320,47619,
#Partially deleted in new
chr6	109400112	109440557	chr6:109400112-109440557	0	-	109400112	109440557	789624	6	58,57,148,63,189,102,	0,19074,26734,26981,31044,40343,
#Partially deleted in new
chr6	109400159	109440528	chr6:109400159-109440528	0	-	109400159	109440528	789624	5	11,57,106,189,73,	0,19027,26687,30997,40296,
#Partially deleted in new
chr6	109418087	109431301	chr6:109418087-109431301	0	-	109418087	109418087	8553170	5	155,57,148,63,145,	0,1099,8759,9006,13069,
#Deleted in new
chr6	109440762	109443919	chr6:109440762-109443919	3	+	109441121	109443905	789624	10	409,97,77,94,90,83,133,105,154,403,	0,594,789,1211,1447,1780,1989,2214,2504,2754,
#Deleted in new
chr6	109441602	109442571	chr6:109441602-109442571	0	+	109441602	109441602	8553170	3	26,94,362,	0,371,607,
#Deleted in new
chr6	109442570	109443556	chr6:109442570-109443556	0	+	109442570	109443556	789624	4	314,105,154,40,	0,406,696,946,
#Partially deleted in new
chr6	109444061	109455742	chr6:109444061-109455742	1	-	109444190	109454196	0	24	278,74,100,94,114,92,277,77,157,84,42,89,191,148,82,127,116,101,156,105,105,208,301,24,	0,663,834,1135,1354,1709,2074,2634,3011,3295,3619,3813,4141,4670,5338,5595,5908,7538,8184,8449,9201,9576,9877,11657,
#Partially deleted in new
chr6	109444061	109455987	chr6:109444061-109455987	3	-	109444190	109454196	0	25	278,74,100,94,114,92,277,77,157,84,42,89,191,148,82,127,116,258,101,156,105,105,208,301,269,	0,663,834,1135,1354,1709,2074,2634,3011,3295,3619,3813,4141,4670,5338,5595,5908,6238,7538,8184,8449,9201,9576,9877,11657,
#Partially deleted in new
chr6	109444061	109455645	chr6:109444061-109455645	0	-	109444061	109444061	8553170	25	278,74,100,94,114,92,222,77,157,84,42,89,191,148,82,127,116,258,802,105,105,208,301,211,35,	0,663,834,1135,1354,1709,2074,2634,3011,3295,3619,3813,4141,4670,5338,5595,5908,6238,7538,8449,9201,9576,9877,10618,11549,
#Deleted in new
chr6	109444064	109450253	chr6:109444064-109450253	0	-	109444064	109444064	8553170	9	275,74,100,94,114,92,637,2711,284,	0,660,831,1132,1351,1706,2071,3008,5905,
#Partially deleted in new
chr6	109444064	109465968	chr6:109444064-109465968	1	-	109444190	109465677	0	25	275,74,100,94,114,92,277,77,157,84,42,89,191,148,82,127,116,258,101,156,105,105,208,301,305,	0,660,831,1132,1351,1706,2071,2631,3008,3292,3616,3810,4138,4667,5335,5592,5905,6235,7535,8181,8446,9198,9573,9874,21599,
#Deleted in new
chr6	109447356	109449783	chr6:109447356-109449783	0	-	109447356	109449783	789624	7	84,42,89,191,139,82,127,	0,324,518,846,1375,2043,2300,
#Deleted in new
chr6	109451728	109452531	chr6:109451728-109452531	0	-	109451728	109451728	8553170	3	391,156,21,	0,517,782,
#Partially deleted in new
chr6	109452345	109455722	chr6:109452345-109455722	0	-	109452345	109454196	789624	6	56,105,105,208,301,112,	0,165,917,1292,1593,3265,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	109462593	109483237	chr6:109462593-109483237	3	-	109465850	109482026	789624	7	3981,82,84,84,168,980,140,	0,5059,12805,13581,14169,18481,20504,
#Partially deleted in new
chr6	109487905	109506800	chr6:109487905-109506800	3	+	109487905	109487905	8553170	3	154,104,124,	0,6559,18771,
#Partially deleted in new
chr6	109492855	109691212	chr6:109492855-109691212	3	-	109493368	109675745	789624	41	716,115,103,99,170,197,221,147,202,214,219,213,63,220,125,261,213,116,201,90,153,77,115,157,149,84,114,96,145,181,140,99,75,129,186,113,97,53,64,128,66,	0,1125,2482,4609,4940,6188,13471,13798,16323,21368,23001,23574,36155,40395,49191,53011,57234,70741,71224,71900,80586,86694,92267,93060,117509,119154,121327,121529,126236,140067,140328,148662,151758,163900,166372,169695,179063,179259,181342,182773,198291,
#Partially deleted in new
chr6	109492858	109533333	chr6:109492858-109533333	0	-	109493368	109533333	789624	14	713,115,103,99,170,197,221,147,202,214,219,213,63,83,	0,1122,2479,4606,4937,6185,13468,13795,16320,21365,22998,23571,36152,40392,
#Partially deleted in new
chr6	109493273	109506418	chr6:109493273-109506418	0	-	109493368	109506418	789624	7	298,115,103,99,170,155,92,	0,707,2064,4191,4522,5770,13053,
#Partially deleted in new
chr6	109527627	109545895	chr6:109527627-109545895	0	-	109528532	109545895	789624	5	1124,63,220,125,29,	0,1383,5623,14419,18239,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	109527628	109550537	chr6:109527628-109550537	1	-	109528869	109550290	789624	5	1445,220,125,261,448,	0,5622,14418,18238,22461,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	109549683	109619201	chr6:109549683-109619201	0	-	109549683	109549683	8553170	13	619,116,201,90,153,77,115,157,149,84,114,96,110,	0,13913,14396,15072,23758,29866,35439,36232,60681,62326,64499,64701,69408,
#Partially deleted in new
chr6	109579344	109691217	chr6:109579344-109691217	1	-	109579529	109675745	789624	20	282,115,157,149,84,114,96,145,181,140,99,75,129,186,113,97,53,64,128,71,	0,5778,6571,31020,32665,34838,35040,39747,53578,53839,62173,65269,77411,79883,83206,92574,92770,94853,96284,111802,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	109631692	109691217	chr6:109631692-109691217	1	-	109632910	109675745	789624	12	1411,140,99,75,129,186,113,97,53,64,128,71,	0,1491,9825,12921,25063,27535,30858,40226,40422,42505,43936,59454,
#Partially deleted in new
chr6	109633243	109662657	chr6:109633243-109662657	0	-	109633243	109662657	789624	5	80,75,129,186,107,	0,11370,23512,25984,29307,
#Partially deleted in new
chr6	109641537	109690506	chr6:109641537-109690506	0	-	109641537	109672117	789624	9	79,75,129,186,113,97,53,64,35,	0,3076,15218,17690,21013,30381,30577,32660,48934,
#Partially deleted in new
chr6	109644504	109659325	chr6:109644504-109659325	0	-	109644504	109659325	789624	3	184,129,98,	0,12251,14723,
#Partially deleted in new
chr6	109644669	109690670	chr6:109644669-109690670	0	-	109644669	109675745	789624	9	19,129,186,113,97,53,64,128,199,	0,12086,14558,17881,27249,27445,29528,30959,45802,
#Partially deleted in new
chr6	109691311	109825428	chr6:109691311-109825428	3	+	109691435	109825265	789624	23	190,99,124,157,51,149,129,101,163,98,134,117,46,149,167,139,59,148,84,196,83,87,341,	0,23766,25133,35797,41325,43838,47013,50132,51798,52363,68938,70779,72625,73701,75417,85610,93658,94990,98282,100064,101270,105453,133776,
#Partially deleted in new
chr6	109701719	109738453	chr6:109701719-109738453	0	+	109701719	109738453	789624	7	3,99,124,157,51,149,129,	0,13358,14725,25389,30917,33430,36605,
#Partially deleted in new
chr6	109716505	109743480	chr6:109716505-109743480	1	+	109716510	109743114	789624	5	63,157,51,149,371,	0,10603,16131,18644,26604,
#Partially deleted in new
chr6	109766728	109785744	chr6:109766728-109785744	0	+	109766728	109785714	789624	4	167,139,59,74,	0,10193,18241,18942,
#Partially deleted in new
chr6	109786005	109791571	chr6:109786005-109791571	0	+	109786432	109791571	789624	3	444,84,196,	0,3588,5370,
#Deleted in new
chr6	109826521	109828785	chr6:109826521-109828785	3	+	109826521	109826521	8553170	2	175,290,	0,1974,
#Deleted in new
chr6	109978255	109980718	chr6:109978255-109980718	1	+	109978775	109980201	789624	3	212,109,1624,	0,438,839,
#Deleted in new
chr6	109979112	109980201	chr6:109979112-109980201	3	+	109979112	109980201	789624	1	1089,	0,
#Partially deleted in new
chr6	110099818	110180004	chr6:110099818-110180004	1	-	110100521	110127601	0	10	861,629,180,173,118,154,135,161,98,566,	0,1769,3559,5588,7258,8709,13507,27650,60816,79620,
#Partially deleted in new
chr6	110099818	110180001	chr6:110099818-110180001	1	-	110100521	110127601	0	11	861,629,180,173,118,154,135,161,98,145,161,	0,1769,3559,5588,7258,8709,13507,27650,60816,78779,80022,
#Partially deleted in new
chr6	110099818	110179702	chr6:110099818-110179702	1	-	110100521	110127601	0	9	861,629,180,173,118,154,135,161,264,	0,1769,3559,5588,7258,8709,13507,27650,79620,
#Partially deleted in new
chr6	110099818	110180004	chr6:110099818-110180004	1	-	110100521	110127601	0	10	861,629,180,173,118,154,135,161,145,566,	0,1769,3559,5588,7258,8709,13507,27650,78779,79620,
#Partially deleted in new
chr6	110099818	110180004	chr6:110099818-110180004	3	-	110100521	110127601	0	11	861,629,180,173,118,154,135,161,98,145,566,	0,1769,3559,5588,7258,8709,13507,27650,60816,78779,79620,
#Partially deleted in new
chr6	110107076	110179670	chr6:110107076-110179670	0	-	110107076	110127601	789624	6	118,154,135,161,98,232,	0,1451,6249,20392,53558,72362,
#Partially deleted in new
chr6	110108527	110179649	chr6:110108527-110179649	0	-	110108527	110127601	789624	6	154,135,161,98,145,211,	0,4798,18941,52107,70070,70911,
#Partially deleted in new
chr6	110108527	110179923	chr6:110108527-110179923	0	-	110108527	110127601	789624	5	154,135,161,145,83,	0,4798,18941,70070,71313,
#Partially deleted in new
chr6	110113325	110180001	chr6:110113325-110180001	0	-	110113325	110127601	789624	6	135,161,98,40,145,161,	0,14143,47309,63821,65272,66515,
#Partially deleted in new
chr6	110113325	110179649	chr6:110113325-110179649	0	-	110113325	110127601	789624	4	135,161,145,211,	0,14143,65272,66113,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr6	110180140	110232223	chr6:110180140-110232223	3	+	110180444	110230131	0	16	40,250,87,130,84,140,97,140,75,46,102,116,134,77,145,2270,	0,243,13041,21417,27365,28943,30566,31992,32945,35145,37561,39223,39595,46026,48691,49813,
#Partially deleted in new
chr6	110180140	110230333	chr6:110180140-110230333	0	+	110180140	110180140	8553170	15	40,250,87,130,84,140,1566,75,46,102,116,134,77,145,380,	0,243,13041,21417,27365,28943,30566,32945,35145,37561,39223,39595,46026,48691,49813,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr6	110180420	110232215	chr6:110180420-110232215	1	+	110180444	110230131	0	15	213,87,130,84,140,97,140,75,46,102,116,134,77,145,2262,	0,12761,21137,27085,28663,30286,31712,32665,34865,37281,38943,39315,45746,48411,49533,
#Partially deleted in new
chr6	110180420	110254275	chr6:110180420-110254275	1	+	110180444	110253942	789624	15	213,87,130,84,140,97,140,75,46,102,116,134,77,145,391,	0,12761,21137,27085,28663,30286,31712,32665,34865,37281,38943,39315,45746,48411,73464,
#Partially deleted in new
chr6	110198974	110209112	chr6:110198974-110209112	0	+	110198974	110198974	8553170	4	63,130,84,29,	0,2583,8531,10109,
#Partially deleted in new
chr6	110201604	110209316	chr6:110201604-110209316	0	+	110201604	110201604	8553170	3	83,84,233,	0,5901,7479,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	110224295	110231671	chr6:110224295-110231671	0	+	110224295	110224295	8553170	2	137,220,	0,7156,
#Partially deleted in new
chr6	110245927	110358272	chr6:110245927-110358272	3	-	110245945	110358272	789624	5	333,229,140,99,318,	0,52994,69414,76846,112027,
#Partially deleted in new
chr6	110322737	110357977	chr6:110322737-110357977	0	-	110322737	110322737	8553170	2	135,642,	0,34598,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	110391770	110415562	chr6:110391770-110415562	1	-	110392774	110415546	789624	4	1572,109,176,96,	0,16563,21520,23696,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	110391770	110415562	chr6:110391770-110415562	3	-	110392774	110415546	789624	5	1572,177,109,176,96,	0,13003,16563,21520,23696,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	110391770	110415562	chr6:110391770-110415562	0	-	110404873	110415546	789624	4	1572,177,176,96,	0,13003,21520,23696,
#Partially deleted in new
chr6	110424686	110476641	chr6:110424686-110476641	3	-	110424872	110476574	789624	8	399,100,110,128,532,118,480,120,	0,6484,11165,14033,17557,22186,31851,51835,
#Partially deleted in new
chr6	110424686	110456821	chr6:110424686-110456821	0	-	110425355	110456821	789624	7	696,100,110,128,532,118,284,	0,6484,11165,14033,17557,22186,31851,
#Deleted in new
chr6	110424686	110425382	chr6:110424686-110425382	0	-	110424686	110424686	8553170	2	399,67,	0,629,
#Partially deleted in new
chr6	110424755	110476204	chr6:110424755-110476204	1	-	110424872	110474978	789624	10	330,100,110,128,532,118,266,118,66,265,	0,6415,11096,13964,17488,22117,31782,32144,50176,51184,
#Partially deleted in new
chr6	110438719	110476440	chr6:110438719-110476440	0	-	110438719	110456922	789624	5	128,532,118,118,125,	0,3524,8153,18180,37596,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	110439995	110440303	chr6:110439995-110440303	3	-	110439995	110439995	8553170	1	308,	0,
#Partially deleted in new
chr6	110442243	110476398	chr6:110442243-110476398	0	-	110442243	110456941	789624	4	532,118,480,83,	0,4629,14294,34072,
#Partially deleted in new
chr6	110446872	110476396	chr6:110446872-110476396	0	-	110446872	110456941	789624	3	118,480,139,	0,9665,29385,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	110455428	110476641	chr6:110455428-110476641	0	-	110455428	110455428	8553170	2	1589,120,	0,21093,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	110477906	110479436	chr6:110477906-110479436	3	+	110477906	110477906	8553170	1	1530,	0,
#Partially deleted in new
chr6	110562174	110562615	chr6:110562174-110562615	7	-	110562174	110562174	16724991	1	441,	0,
#Partially deleted in new
chr6	110598092	110598705	chr6:110598092-110598705	7	+	110598092	110598092	16724991	1	613,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	110609977	110815637	chr6:110609977-110815637	1	-	110614534	110746149	789624	14	4689,267,79,98,73,70,144,132,58,141,111,76,62,67,	0,11126,12110,12837,13312,16798,17024,22052,28671,57456,60453,136148,163898,205593,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	110609977	110815316	chr6:110609977-110815316	3	-	110614534	110815136	789624	13	4689,267,79,98,73,70,144,132,58,141,111,76,308,	0,11126,12110,12837,13312,16798,17024,22052,28671,57456,60453,136148,205031,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	110609977	110815209	chr6:110609977-110815209	1	-	110614534	110746149	789624	12	4689,267,79,98,73,70,144,58,141,111,76,201,	0,11126,12110,12837,13312,16798,17024,28671,57456,60453,136148,205031,
#Partially deleted in new
chr6	110623289	110815096	chr6:110623289-110815096	0	-	110623289	110746149	789624	10	73,70,144,132,58,141,111,76,62,88,	0,3486,3712,8740,15359,44144,47141,122836,150586,191719,
#Partially deleted in new
chr6	110627001	110746201	chr6:110627001-110746201	0	-	110632122	110746201	789624	5	144,132,141,111,76,	0,5028,40432,43429,119124,
#Deleted in new
chr6	110645698	110646558	chr6:110645698-110646558	7	+	110645698	110645698	16724991	1	860,	0,
#Partially deleted in new
chr6	110667433	110815204	chr6:110667433-110815204	0	-	110667433	110667433	8553170	3	141,111,196,	0,2997,147575,
#Deleted in new
chr6	110700561	110700900	chr6:110700561-110700900	7	+	110700561	110700561	16724991	1	339,	0,
#Partially deleted in new
chr6	110706361	110706882	chr6:110706361-110706882	7	-	110706361	110706361	16724991	2	37,167,	0,354,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	110722249	110722348	chr6:110722249-110722348	3	-	110722249	110722249	8553170	1	99,	0,
#Partially deleted in new
chr6	110813158	110815125	chr6:110813158-110815125	0	-	110813158	110813158	8553170	2	966,117,	0,1850,
#Partially deleted in new
chr6	110813158	110815958	chr6:110813158-110815958	0	-	110813158	110813158	8553170	2	966,151,	0,2649,
#Deleted in new
chr6	110848545	110848673	chr6:110848545-110848673	3	+	110848545	110848545	5263520	1	128,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	110856416	110856522	chr6:110856416-110856522	3	+	110856416	110856416	8553170	1	106,	0,
#Partially deleted in new
chr6	110858238	110859147	chr6:110858238-110859147	7	+	110858238	110858238	16724991	1	909,	0,
#Partially deleted in new
chr6	110863859	110864451	chr6:110863859-110864451	7	+	110863859	110863859	16724991	2	106,205,	0,387,
#Partially deleted in new
chr6	110874769	110895713	chr6:110874769-110895713	3	+	110875105	110893616	0	9	446,87,127,103,43,145,93,156,2238,	0,12735,14087,15484,17391,17529,17965,18140,18706,
#Partially deleted in new
chr6	110874769	110895713	chr6:110874769-110895713	0	+	110875105	110892197	789624	6	446,43,145,93,156,2238,	0,17391,17529,17965,18140,18706,
#Partially deleted in new
chr6	110874783	110895708	chr6:110874783-110895708	1	+	110875105	110893616	789624	5	432,145,93,156,2233,	0,17515,17951,18126,18692,
#Partially deleted in new
chr6	110874784	110893982	chr6:110874784-110893982	1	+	110888866	110893616	789624	8	431,127,103,43,145,93,156,507,	0,14072,15469,17376,17514,17950,18125,18691,
#Partially deleted in new
chr6	110875574	110895713	chr6:110875574-110895713	1	+	110888866	110893616	789624	9	48,87,127,103,43,145,93,156,2238,	0,11930,13282,14679,16586,16724,17160,17335,17901,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	110888285	110895712	chr6:110888285-110895712	0	+	110888285	110888285	8553170	6	2071,43,145,93,156,2237,	0,3875,4013,4449,4624,5190,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	110890788	110895704	chr6:110890788-110895704	0	+	110890788	110890788	8553170	4	1415,529,156,2229,	0,1510,2121,2687,
#Partially deleted in new
chr6	110892824	110894061	chr6:110892824-110894061	0	+	110892824	110892887	8553170	3	3,193,586,	0,48,651,
#Deleted in new
chr6	110923565	110924107	chr6:110923565-110924107	7	+	110923565	110923565	16724991	1	542,	0,
#Partially deleted in new
chr6	110958559	110967890	chr6:110958559-110967890	3	+	110958769	110967790	789624	6	267,81,64,45,114,381,	0,612,1854,2012,3832,8950,
#Partially deleted in new
chr6	110958927	110967890	chr6:110958927-110967890	0	+	110958927	110958927	8553170	6	115,81,64,45,114,381,	0,244,1486,1644,3464,8582,
#Partially deleted in new
chr6	110982014	111024327	chr6:110982014-111024327	0	+	110982106	110989062	789624	9	115,133,78,40,82,77,100,103,145,	0,2991,6973,9732,15168,17696,26023,33739,42168,
#Partially deleted in new
chr6	110982014	111026100	chr6:110982014-111026100	3	+	110982106	111025582	789624	10	115,133,38,40,82,77,100,103,145,698,	0,2991,7013,9732,15168,17696,26023,33739,42168,43388,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	110982049	111028263	chr6:110982049-111028263	0	+	110982106	110991770	789624	9	80,133,40,82,77,100,103,145,2861,	0,2956,9697,15133,17661,25988,33704,42133,43353,
#Partially deleted in new
chr6	110982315	111024327	chr6:110982315-111024327	0	+	110985081	111024327	789624	9	188,133,38,40,82,77,100,103,145,	0,2690,6712,9431,14867,17395,25722,33438,41867,
#Deleted in new
chr6	111046867	111047521	chr6:111046867-111047521	7	-	111046867	111046867	16724991	1	654,	0,
#Partially deleted in new
chr6	111087502	111177706	chr6:111087502-111177706	1	+	111087752	111177706	789624	4	593,145,352,141,	0,85192,89709,90063,
#Partially deleted in new
chr6	111087577	111223020	chr6:111087577-111223020	3	+	111087752	111222235	789624	6	518,145,454,144,229,1018,	0,85117,89634,119014,131236,134425,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	111091212	111091332	chr6:111091212-111091332	3	-	111091212	111091212	8553170	1	120,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	111172694	111178714	chr6:111172694-111178714	0	+	111172694	111178437	789624	3	145,454,313,	0,4517,5707,
#Partially deleted in new
chr6	111172694	111177712	chr6:111172694-111177712	0	+	111172694	111177686	789624	2	145,501,	0,4517,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	111172694	111177712	chr6:111172694-111177712	0	+	111172694	111172694	8553170	3	145,88,501,	0,743,4517,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	111177211	111231194	chr6:111177211-111231194	1	+	111206591	111222235	789624	5	454,32,144,229,9192,	0,16081,29380,41602,44791,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	111227746	111259034	chr6:111227746-111259034	3	-	111227746	111227746	8553170	4	177,66,85,105,	0,3734,6252,31183,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	111259347	111271167	chr6:111259347-111271167	3	+	111259700	111267119	789624	4	380,169,117,5292,	0,2909,4482,6528,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	111277931	111278742	chr6:111277931-111278742	3	+	111277931	111277931	8553170	2	227,330,	0,481,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	111297125	111298510	chr6:111297125-111298510	3	+	111297125	111297125	8553170	1	1385,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	111299027	111315637	chr6:111299027-111315637	0	-	111299027	111299027	8553170	7	1129,210,232,247,191,138,371,	0,8333,8986,10825,12041,14324,16239,
#Partially deleted in new
chr6	111299030	111483211	chr6:111299030-111483211	1	-	111300015	111482888	0	32	1126,210,247,191,138,115,110,207,109,245,142,119,119,116,112,193,126,80,914,4162,143,238,120,149,85,105,95,97,161,75,190,462,	0,8330,10822,12038,14321,16236,23538,30501,32645,34092,36438,44894,50187,52645,57983,59791,64822,66234,68084,73565,78670,80951,82294,88734,88970,90075,91055,93845,106439,112449,117252,183719,
#Partially deleted in new
chr6	111299030	111483229	chr6:111299030-111483229	1	-	111300015	111482888	0	33	1126,210,247,191,138,115,110,207,109,245,142,119,119,116,112,193,126,80,914,4162,143,238,120,149,85,105,95,97,161,75,190,182,40,	0,8330,10822,12038,14321,16236,23538,30501,32645,34092,36438,44894,50187,52645,57983,59791,64822,66234,68084,73565,78670,80951,82294,88734,88970,90075,91055,93845,106439,112449,117252,183719,184159,
#Partially deleted in new
chr6	111299030	111483715	chr6:111299030-111483715	0	-	111472135	111482888	789624	34	1126,210,247,191,138,115,110,207,109,245,142,119,119,116,112,193,126,80,914,4162,143,238,120,149,85,105,95,97,161,75,190,128,480,117,	0,8330,10822,12038,14321,16236,23538,30501,32645,34092,36438,44894,50187,52645,57983,59791,64822,66234,68084,73565,78670,80951,82294,88734,88970,90075,91055,93845,106439,112449,117252,172982,183719,184568,
#Partially deleted in new
chr6	111299030	111482919	chr6:111299030-111482919	0	-	111472135	111482888	789624	34	1126,210,247,191,138,115,110,207,109,245,142,119,119,116,112,193,126,80,914,4162,143,238,120,149,85,105,95,97,161,75,190,107,128,170,	0,8330,10822,12038,14321,16236,23538,30501,32645,34092,36438,44894,50187,52645,57983,59791,64822,66234,68084,73565,78670,80951,82294,88734,88970,90075,91055,93845,106439,112449,117252,161269,172982,183719,
#Partially deleted in new
chr6	111299051	111483715	chr6:111299051-111483715	3	-	111300015	111482888	0	33	1105,210,247,191,138,115,110,207,109,245,142,119,119,116,112,193,126,80,914,4162,143,238,120,149,85,105,95,97,161,75,190,480,117,	0,8309,10801,12017,14300,16215,23517,30480,32624,34071,36417,44873,50166,52624,57962,59770,64801,66213,68063,73544,78649,80930,82273,88713,88949,90054,91034,93824,106418,112428,117231,183698,184547,
#Partially deleted in new
chr6	111299051	111483715	chr6:111299051-111483715	1	-	111300015	111416377	0	34	1105,210,247,191,138,115,110,207,109,245,142,119,119,116,112,193,126,80,914,4162,143,238,120,149,85,105,95,97,161,75,190,128,480,117,	0,8309,10801,12017,14300,16215,23517,30480,32624,34071,36417,44873,50166,52624,57962,59770,64801,66213,68063,73544,78649,80930,82273,88713,88949,90054,91034,93824,106418,112428,117231,172961,183698,184547,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	111307730	111315422	chr6:111307730-111315422	1	-	111307730	111315422	789624	6	5,232,247,191,138,156,	0,283,2122,3338,5621,7536,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	111309202	111313517	chr6:111309202-111313517	3	+	111309202	111309202	8553170	1	4315,	0,
#Partially deleted in new
chr6	111343949	111367358	chr6:111343949-111367358	0	-	111357020	111367358	789624	7	94,119,116,112,126,80,244,	0,5268,7726,13064,19903,21315,23165,
#Partially deleted in new
chr6	111348952	111351733	chr6:111348952-111351733	0	-	111348952	111348952	8553170	2	384,58,	0,2723,
#Deleted in new
chr6	111353701	111354183	chr6:111353701-111354183	7	+	111353701	111353701	16724991	1	482,	0,
#Partially deleted in new
chr6	111356667	111358901	chr6:111356667-111358901	0	-	111356667	111356667	8553170	2	458,80,	0,2154,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	111360640	111361607	chr6:111360640-111361607	3	-	111360640	111360640	8553170	2	81,301,	0,666,
#Partially deleted in new
chr6	111387745	111390113	chr6:111387745-111390113	0	-	111387745	111387745	8553170	4	168,85,105,28,	0,255,1360,2340,
#Partially deleted in new
chr6	111392694	111405632	chr6:111392694-111405632	0	-	111392694	111392694	8553170	2	278,163,	0,12775,
#Partially deleted in new
chr6	111405426	111411556	chr6:111405426-111411556	0	-	111405426	111405426	8553170	2	204,77,	0,6053,
#Deleted in new
chr6	111430259	111431781	chr6:111430259-111431781	7	+	111430259	111430259	16724991	1	1522,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	111483510	111493003	chr6:111483510-111493003	1	+	111483510	111483510	8553170	2	155,2036,	0,7457,
#Partially deleted in new
chr6	111483515	111503608	chr6:111483515-111503608	1	+	111483515	111483515	789624	4	150,28,118,313,	0,602,1228,19780,
#Partially deleted in new
chr6	111483540	111577160	chr6:111483540-111577160	0	+	111483540	111483540	789624	3	125,182,799,	0,91080,92821,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	111483549	111587133	chr6:111483549-111587133	1	+	111483549	111483549	8553170	4	116,182,109,141,	0,91071,92812,103443,
#Partially deleted in new
chr6	111483554	111598302	chr6:111483554-111598302	0	+	111483554	111483554	8553170	2	111,465,	0,114283,
#Partially deleted in new
chr6	111483557	111503511	chr6:111483557-111503511	0	+	111483557	111483557	8553170	2	108,216,	0,19738,
#Partially deleted in new
chr6	111483561	111576741	chr6:111483561-111576741	3	+	111483561	111483561	8553170	4	104,118,182,380,	0,1182,91059,92800,
#Partially deleted in new
chr6	111483611	111576753	chr6:111483611-111576753	1	+	111483611	111483611	8553170	3	54,38,392,	0,91009,92750,
#Partially deleted in new
chr6	111483664	111503611	chr6:111483664-111503611	0	+	111483664	111483664	8553170	3	481,118,316,	0,1079,19631,
#Partially deleted in new
chr6	111484651	111576590	chr6:111484651-111576590	0	+	111484651	111484651	8553170	2	210,229,	0,91710,
#Deleted in new
chr6	111494990	111495713	chr6:111494990-111495713	7	-	111494990	111494990	16724991	2	180,474,	0,249,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	111556453	111606246	chr6:111556453-111606246	1	-	111559404	111592086	789624	9	3098,75,117,69,89,179,193,837,471,	0,6511,9990,11170,16441,19189,23743,34804,49322,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	111558939	111606278	chr6:111558939-111606278	3	-	111559404	111601214	789624	10	612,75,117,69,89,179,193,837,111,503,	0,4025,7504,8684,13955,16703,21257,32318,42256,46836,
#Partially deleted in new
chr6	111558939	111605871	chr6:111558939-111605871	1	-	111559404	111592086	789624	9	612,75,114,69,89,179,193,837,96,	0,4025,7504,8684,13955,16703,21257,32318,46836,
#Partially deleted in new
chr6	111558941	111601214	chr6:111558941-111601214	1	-	111559404	111601214	789624	9	610,75,117,69,89,179,193,837,19,	0,4023,7502,8682,13953,16701,21255,32316,42254,
#Partially deleted in new
chr6	111558944	111566500	chr6:111558944-111566500	0	-	111558944	111558944	8553170	2	607,57,	0,7499,
#Partially deleted in new
chr6	111558960	111573986	chr6:111558960-111573986	0	-	111558960	111558960	8553170	6	591,75,117,69,89,466,	0,4004,7483,8663,13934,14560,
#Partially deleted in new
chr6	111558985	111567360	chr6:111558985-111567360	1	-	111559404	111566551	789624	4	566,75,117,145,	0,3979,7458,8230,
#Partially deleted in new
chr6	111559018	111567121	chr6:111559018-111567121	0	-	111559018	111559018	8553170	4	533,75,117,124,	0,3946,7425,7979,
#Partially deleted in new
chr6	111559236	111567279	chr6:111559236-111567279	0	-	111559236	111559236	8553170	4	315,75,117,230,	0,3728,7207,7813,
#Deleted in new
chr6	111563024	111567276	chr6:111563024-111567276	0	-	111563024	111563024	8553170	3	15,117,165,	0,3419,4087,
#Partially deleted in new
chr6	111565250	111576877	chr6:111565250-111576877	0	+	111565250	111565250	8553170	3	32,182,516,	0,9370,11111,
#Partially deleted in new
chr6	111567252	111605870	chr6:111567252-111605870	0	-	111567252	111567252	8553170	7	440,89,179,193,837,123,95,	0,5642,8390,12944,24005,33943,38523,
#Partially deleted in new
chr6	111572716	111605962	chr6:111572716-111605962	0	-	111572716	111572716	8553170	5	267,179,193,837,187,	0,2926,7480,18541,33059,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	111574618	111587134	chr6:111574618-111587134	0	+	111574618	111574618	8553170	3	184,109,142,	0,1743,12374,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	111599874	111602295	chr6:111599874-111602295	3	+	111599874	111599874	8553170	1	2421,	0,
#Partially deleted in new
chr6	111660331	111873452	chr6:111660331-111873452	3	-	111661738	111720051	0	14	1616,132,154,77,180,165,150,104,99,97,258,70,41,485,	0,14167,34043,34296,35945,39772,42553,43667,47590,54015,59473,120234,186257,212636,
#Partially deleted in new
chr6	111660331	111873067	chr6:111660331-111873067	1	-	111661738	111720051	0	14	1616,132,154,77,180,156,150,104,99,97,258,70,41,100,	0,14167,34043,34296,35945,39183,42553,43667,47590,54015,59473,120234,186257,212636,
#Partially deleted in new
chr6	111660331	111720062	chr6:111660331-111720062	1	-	111661738	111720051	0	11	1616,132,154,77,180,156,150,104,99,97,258,	0,14167,34043,34296,35945,39183,42553,43667,47590,54015,59473,
#Partially deleted in new
chr6	111661281	111759131	chr6:111661281-111759131	1	-	111661738	111720051	0	11	666,132,154,77,180,150,104,99,97,258,92,	0,13217,33093,33346,34995,41603,42717,46640,53065,58523,97758,
#Partially deleted in new
chr6	111661281	111793886	chr6:111661281-111793886	1	-	111661738	111720051	0	13	666,132,154,77,180,165,150,104,99,97,258,70,264,	0,13217,33093,33346,34995,38822,41603,42717,46640,53065,58523,119284,132341,
#Partially deleted in new
chr6	111661285	111873430	chr6:111661285-111873430	1	-	111661738	111720051	0	13	662,132,154,77,180,156,150,104,99,97,258,41,463,	0,13213,33089,33342,34991,38229,41599,42713,46636,53061,58519,185303,211682,
#Partially deleted in new
chr6	111661556	111676544	chr6:111661556-111676544	0	-	111661556	111661556	8553170	3	391,132,126,	0,12942,14862,
#Partially deleted in new
chr6	111661759	111696524	chr6:111661759-111696524	0	-	111661759	111661759	8553170	5	188,132,154,77,248,	0,12739,32615,32868,34517,
#Partially deleted in new
chr6	111674464	111696815	chr6:111674464-111696815	0	-	111674464	111674464	8553170	4	166,154,73,539,	0,19910,20163,21812,
#Partially deleted in new
chr6	111696281	111714492	chr6:111696281-111714492	0	-	111696281	111696281	8553170	6	175,165,150,104,99,146,	0,3822,6603,7717,11640,18065,
#Partially deleted in new
chr6	111696299	111709064	chr6:111696299-111709064	0	-	111696299	111696299	8553170	6	157,165,150,104,99,118,	0,3804,6585,7699,11622,12647,
#Deleted in new
chr6	111699934	111702986	chr6:111699934-111702986	0	-	111699934	111699934	8553170	2	334,102,	0,2950,
#Partially deleted in new
chr6	111700186	111708227	chr6:111700186-111708227	0	-	111700186	111700186	8553170	4	82,150,104,306,	0,2698,3812,7735,
#Partially deleted in new
chr6	111702415	111707953	chr6:111702415-111707953	0	-	111702415	111702415	8553170	3	619,104,32,	0,1583,5506,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	111702877	111759925	chr6:111702877-111759925	0	-	111702877	111702877	8553170	7	157,104,99,97,258,113,81,	0,1121,5044,11469,16927,38103,56967,
#Partially deleted in new
chr6	111702884	111759114	chr6:111702884-111759114	0	-	111702884	111720051	789624	6	150,104,99,97,258,281,	0,1114,5037,11462,16920,55949,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	111703022	111873037	chr6:111703022-111873037	0	-	111703022	111720051	789624	9	12,104,99,97,258,113,70,41,70,	0,976,4899,11324,16782,37958,77543,143566,169945,
#Partially deleted in new
chr6	111704019	111759917	chr6:111704019-111759917	0	-	111704019	111720051	789624	5	83,99,97,258,73,	0,3902,10327,15785,55825,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	111704086	111873281	chr6:111704086-111873281	0	-	111704086	111720051	789624	8	16,99,97,258,117,70,41,314,	0,3835,10260,15718,36894,76479,142502,168881,
#Partially deleted in new
chr6	111704087	111873440	chr6:111704087-111873440	0	-	111704087	111720051	789624	6	15,99,97,258,70,473,	0,3834,10259,15717,76478,168880,
#Partially deleted in new
chr6	111707929	111781080	chr6:111707929-111781080	0	-	111707929	111720051	789624	5	91,97,258,70,25,	0,6417,11875,72636,73126,
#Partially deleted in new
chr6	111707945	111798423	chr6:111707945-111798423	0	-	111707945	111720051	789624	5	75,97,258,70,69,	0,6401,11859,72620,90409,
#Partially deleted in new
chr6	111708010	111858383	chr6:111708010-111858383	0	-	111708010	111720051	789624	6	10,97,258,70,41,95,	0,6336,11794,72555,138578,150278,
#Partially deleted in new
chr6	111708016	111844944	chr6:111708016-111844944	0	-	111708016	111720051	789624	5	4,97,258,70,168,	0,6330,11788,72549,136760,
#Partially deleted in new
chr6	111714370	111873301	chr6:111714370-111873301	0	-	111714370	111720051	789624	6	73,258,70,41,238,32,	0,5434,66195,132218,158597,158899,
#Partially deleted in new
chr6	111714381	111820078	chr6:111714381-111820078	0	-	111714381	111720051	789624	4	62,258,70,219,	0,5423,66184,105478,
#Partially deleted in new
chr6	111714429	111793912	chr6:111714429-111793912	0	-	111714429	111720051	789624	5	14,207,244,70,290,	0,5426,40004,66136,79193,
#Partially deleted in new
chr6	111719656	111819980	chr6:111719656-111819980	0	-	111719656	111719656	8553170	4	406,70,126,121,	0,60909,98958,100203,
#Partially deleted in new
chr6	111719857	111846615	chr6:111719857-111846615	0	-	111719857	111720051	789624	4	205,70,216,27,	0,60708,94034,126731,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	111900488	111901851	chr6:111900488-111901851	3	-	111900488	111900488	8553170	2	653,109,	0,1254,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	112054071	112070969	chr6:112054071-112070969	3	+	112054303	112069620	789624	5	334,298,243,194,1631,	0,6919,10683,14133,15267,
#Partially deleted in new
chr6	112054074	112069680	chr6:112054074-112069680	1	+	112054357	112069620	789624	6	87,71,298,243,194,342,	0,260,6916,10680,14130,15264,
#Partially deleted in new
chr6	112054074	112069686	chr6:112054074-112069686	0	+	112054357	112068211	789624	7	87,71,298,243,64,194,348,	0,260,6916,10680,12894,14130,15264,
#Partially deleted in new
chr6	112054074	112069686	chr6:112054074-112069686	1	+	112054357	112069620	789624	6	96,71,298,243,194,348,	0,260,6916,10680,14130,15264,
#Deleted in new
chr6	112054183	112054890	chr6:112054183-112054890	0	+	112054183	112054183	8553170	2	222,268,	0,439,
#Partially deleted in new
chr6	112054219	112069658	chr6:112054219-112069658	0	+	112054303	112068211	789624	6	186,298,243,64,194,320,	0,6771,10535,12749,13985,15119,
#Partially deleted in new
chr6	112054219	112069658	chr6:112054219-112069658	1	+	112068287	112069620	789624	6	15,117,243,64,194,320,	0,7059,10535,12749,13985,15119,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	112054258	112070968	chr6:112054258-112070968	1	+	112054357	112069620	789624	5	147,298,243,194,1630,	0,6732,10496,13946,15080,
#Partially deleted in new
chr6	112060012	112069686	chr6:112060012-112069686	0	+	112060012	112060012	8553170	5	63,223,234,194,348,	0,1059,4751,8192,9326,
#Partially deleted in new
chr6	112061036	112069680	chr6:112061036-112069680	1	+	112061036	112069620	789624	5	6,250,234,194,342,	0,8,3727,7168,8302,
#Partially deleted in new
chr6	112061278	112069658	chr6:112061278-112069658	0	+	112061278	112061278	8553170	5	117,243,64,194,320,	0,3476,5690,6926,8060,
#Partially deleted in new
chr6	112070776	112087513	chr6:112070776-112087513	3	-	112071411	112087434	789624	12	794,175,141,141,176,188,122,116,58,53,74,104,	0,1125,1981,3933,5160,5545,8856,10315,13412,15779,16456,16633,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	112071264	112085694	chr6:112071264-112085694	0	-	112071264	112071264	8553170	10	306,175,141,141,176,188,122,116,58,361,	0,637,1493,3445,4672,5057,8368,9827,12924,14069,
#Partially deleted in new
chr6	112071328	112087509	chr6:112071328-112087509	0	-	112076144	112087434	789624	12	242,175,141,141,235,188,122,116,58,53,74,100,	0,573,1429,3381,4608,4993,8304,9763,12860,15227,15904,16081,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	112072781	112075151	chr6:112072781-112075151	0	-	112072781	112072781	8553170	2	117,442,	0,1928,
#Partially deleted in new
chr6	112074709	112087498	chr6:112074709-112087498	0	-	112081197	112087434	789624	8	141,176,188,122,116,53,74,89,	0,1227,1612,4923,6382,11846,12523,12700,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	112075084	112078694	chr6:112075084-112078694	0	-	112075084	112075084	8553170	1	3610,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	112076434	112087466	chr6:112076434-112087466	0	-	112085730	112087434	789624	7	75,122,112,89,53,74,57,	0,3198,4657,9220,10121,10798,10975,
#Partially deleted in new
chr6	112079399	112087479	chr6:112079399-112087479	0	-	112079399	112079399	8553170	6	355,116,58,53,74,70,	0,1692,4789,7156,7833,8010,
#Partially deleted in new
chr6	112083915	112087498	chr6:112083915-112087498	0	-	112083915	112083915	8553170	4	331,53,74,89,	0,2640,3317,3494,
#Deleted in new
chr6	112086813	112087529	chr6:112086813-112087529	0	-	112086813	112086813	8553170	2	493,120,	0,596,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	112087598	112102790	chr6:112087598-112102790	3	+	112099283	112100787	789624	4	122,161,139,2121,	0,9442,11671,13071,
#Partially deleted in new
chr6	112087637	112100895	chr6:112087637-112100895	1	+	112099283	112100787	789624	4	72,161,139,226,	0,9403,11632,13032,
#Partially deleted in new
chr6	112108759	112254715	chr6:112108759-112254715	1	-	112109436	112254150	789624	39	823,120,94,131,160,156,190,188,154,165,134,138,139,143,132,172,134,163,146,174,140,180,117,97,142,149,117,194,168,112,111,152,96,215,81,125,102,336,257,	0,5316,5903,7103,8979,10396,11523,13254,20162,21116,22208,23993,24589,25707,27363,30360,30992,32000,32598,33359,36034,39397,41751,46091,46805,49972,56400,63851,66553,69361,76477,78690,80350,82876,92848,98261,107608,145196,145699,
#Partially deleted in new
chr6	112108859	112254710	chr6:112108859-112254710	3	-	112109436	112254150	789624	39	723,120,94,131,160,156,190,188,154,165,134,138,139,143,132,172,134,163,146,174,140,180,117,97,142,149,117,194,168,112,111,152,75,215,81,125,102,336,269,	0,5216,5803,7003,8879,10296,11423,13154,20062,21016,22108,23893,24489,25607,27263,30260,30892,31900,32498,33259,35934,39297,41651,45991,46705,49872,56300,63751,66453,69261,76377,78590,80271,82776,92748,98161,107508,145096,145582,
#Partially deleted in new
chr6	112108873	112254600	chr6:112108873-112254600	1	-	112109436	112254150	789624	39	709,120,94,131,160,156,190,188,154,165,134,138,139,143,132,172,134,163,146,174,140,180,117,97,142,149,117,194,168,112,111,152,75,215,81,125,102,336,142,	0,5202,5789,6989,8865,10282,11409,13140,20048,21002,22094,23879,24475,25593,27249,30246,30878,31886,32484,33245,35920,39283,41637,45977,46691,49858,56286,63737,66439,69247,76363,78576,80257,82762,92734,98147,107494,145082,145585,
#Partially deleted in new
chr6	112109292	112254538	chr6:112109292-112254538	1	-	112109436	112254150	789624	38	290,120,94,131,160,156,190,188,154,165,134,138,139,143,132,172,134,163,146,174,140,180,117,97,142,149,117,194,168,112,111,152,75,215,81,125,102,583,	0,4783,5370,6570,8446,9863,10990,12721,19629,20583,21675,23460,24056,25174,26830,29827,30459,31467,32065,32826,35501,38864,41218,45558,46272,49439,55867,63318,66020,68828,75944,78157,79838,82343,92315,97728,107075,144663,
#Partially deleted in new
chr6	112121774	112129988	chr6:112121774-112129988	0	-	112121774	112121774	8553170	3	427,154,113,	0,7147,8101,
#Partially deleted in new
chr6	112122060	112130159	chr6:112122060-112130159	0	-	112122060	112122060	8553170	3	141,154,284,	0,6861,7815,
#Partially deleted in new
chr6	112135824	112139276	chr6:112135824-112139276	0	-	112135824	112135824	8553170	2	430,157,	0,3295,
#Partially deleted in new
chr6	112142143	112165164	chr6:112142143-112165164	0	-	112150454	112165164	789624	8	149,140,180,192,97,142,149,5,	0,2650,6013,8292,12707,13421,16588,23016,
#Partially deleted in new
chr6	112154764	112166476	chr6:112154764-112166476	3	+	112154764	112154764	8553170	5	150,217,47,115,278,	0,555,3153,9277,11434,
#Deleted in new
chr6	112154790	112155732	chr6:112154790-112155732	0	+	112154790	112154790	8553170	2	124,413,	0,529,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	112154852	112164115	chr6:112154852-112164115	0	+	112154852	112154852	8553170	7	62,217,47,42,57,211,74,	0,467,3065,4127,4614,7176,9189,
#Partially deleted in new
chr6	112154852	112166449	chr6:112154852-112166449	0	+	112154852	112154852	8553170	7	62,217,47,42,123,115,251,	0,467,3065,4127,4548,9189,11346,
#Partially deleted in new
chr6	112154852	112166449	chr6:112154852-112166449	0	+	112154852	112154852	8553170	7	62,217,47,42,57,115,251,	0,467,3065,4127,4614,9189,11346,
#Deleted in new
chr6	112155320	112158332	chr6:112155320-112158332	1	+	112155320	112155320	8553170	3	216,47,130,	0,2597,2882,
#Partially deleted in new
chr6	112171629	112179502	chr6:112171629-112179502	0	-	112171629	112171629	8553170	3	1175,168,1382,	0,3683,6491,
#Partially deleted in new
chr6	112179734	112191811	chr6:112179734-112191811	0	-	112179901	112191811	789624	5	215,111,152,75,176,	0,5502,7715,9396,11901,
#Partially deleted in new
chr6	112179765	112191764	chr6:112179765-112191764	0	-	112179901	112191764	789624	5	184,111,152,96,129,	0,5471,7684,9344,11870,
#Partially deleted in new
chr6	112185318	112254485	chr6:112185318-112254485	0	-	112185318	112254150	789624	8	29,152,96,215,81,125,102,530,	0,2131,3791,6317,16289,21702,31049,68637,
#Partially deleted in new
chr6	112188891	112191801	chr6:112188891-112191801	0	-	112188891	112188891	8553170	2	314,166,	0,2744,
#Partially deleted in new
chr6	112191718	112216754	chr6:112191718-112216754	0	-	112191718	112191718	8553170	5	132,81,125,102,119,	0,9889,15302,24649,24917,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	112196439	112196546	chr6:112196439-112196546	3	-	112196439	112196439	8553170	1	107,	0,
#Partially deleted in new
chr6	112200132	112216449	chr6:112200132-112216449	0	-	112200132	112200132	8553170	4	43,81,125,82,	0,1475,6888,16235,
#Partially deleted in new
chr6	112207122	112254722	chr6:112207122-112254722	0	-	112207122	112254150	789624	4	23,102,336,127,	0,9245,46833,47473,
#Partially deleted in new
chr6	112213542	112254572	chr6:112213542-112254572	1	-	112213977	112254150	789624	4	528,102,336,114,	0,2825,40413,40916,
#Partially deleted in new
chr6	112216401	112254538	chr6:112216401-112254538	0	-	112216401	112254150	789624	3	68,336,137,	0,37554,38000,
#Partially deleted in new
chr6	112216420	112254939	chr6:112216420-112254939	0	-	112216420	112254150	789624	3	49,336,154,	0,37535,38365,
#Deleted in new
chr6	112217639	112219570	chr6:112217639-112219570	3	-	112217639	112217639	8553170	1	1931,	0,
#Deleted in new
chr6	112234164	112234758	chr6:112234164-112234758	3	-	112234164	112234164	8553170	1	594,	0,
#Partially deleted in new
chr6	112236092	112307009	chr6:112236092-112307009	3	+	112236092	112236092	8553170	3	546,138,681,	0,686,70236,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	112236805	112306571	chr6:112236805-112306571	0	+	112236805	112236805	8553170	4	111,139,230,243,	0,46248,46492,69523,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	112236805	112345321	chr6:112236805-112345321	0	+	112236805	112236805	8553170	3	111,381,283,	0,106592,108233,
#Partially deleted in new
chr6	112236805	112349918	chr6:112236805-112349918	0	+	112349708	112349918	789624	5	111,381,116,129,315,	0,106592,110486,112387,112798,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	112236805	112279526	chr6:112236805-112279526	0	+	112236805	112236805	8553170	3	111,132,406,	0,40374,42315,
#Partially deleted in new
chr6	112236805	112292832	chr6:112236805-112292832	0	+	112236805	112236805	8553170	2	111,749,	0,55278,
#Partially deleted in new
chr6	112236805	112306683	chr6:112236805-112306683	0	+	112236805	112236805	8553170	4	111,118,114,355,	0,42315,46248,69523,
#Partially deleted in new
chr6	112236805	112349814	chr6:112236805-112349814	0	+	112349708	112349814	789624	4	111,116,129,211,	0,110486,112387,112798,
#Partially deleted in new
chr6	112236805	112306679	chr6:112236805-112306679	0	+	112236805	112236805	8553170	3	111,139,351,	0,46248,69523,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	112236805	112306675	chr6:112236805-112306675	0	+	112236805	112236805	8553170	3	111,195,347,	0,21552,69523,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	112236829	112257334	chr6:112236829-112257334	0	+	112236829	112236829	8553170	2	87,590,	0,19915,
#Partially deleted in new
chr6	112236829	112251613	chr6:112236829-112251613	0	+	112236829	112236829	8553170	2	87,326,	0,14458,
#Deleted in new
chr6	112253360	112254588	chr6:112253360-112254588	1	-	112253787	112254150	789624	2	931,130,	0,1098,
#Deleted in new
chr6	112253783	112254578	chr6:112253783-112254578	1	-	112253787	112254150	789624	2	508,137,	0,658,
#Deleted in new
chr6	112253789	112254647	chr6:112253789-112254647	0	-	112253789	112254150	789624	2	502,52,	0,806,
#Deleted in new
chr6	112325752	112326749	chr6:112325752-112326749	7	-	112325752	112325752	16724991	1	997,	0,
#Partially deleted in new
chr6	112347329	112351296	chr6:112347329-112351296	3	+	112349708	112350500	789624	3	78,129,1693,	0,1863,2274,
#Deleted in new
chr6	112355840	112356714	chr6:112355840-112356714	7	-	112355840	112355840	16724991	1	874,	0,
#Deleted in new
chr6	112361436	112362722	chr6:112361436-112362722	7	-	112361436	112361436	16724991	1	1286,	0,
#Deleted in new
chr6	112365703	112367444	chr6:112365703-112367444	7	-	112365703	112365703	16724991	1	1741,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	112476537	112481636	chr6:112476537-112481636	3	-	112476537	112476537	8553170	2	379,109,	0,4990,
#Partially deleted in new
chr6	112616702	112617880	chr6:112616702-112617880	7	-	112616702	112616702	16724991	1	1178,	0,
#Partially deleted in new
chr6	112825938	112826470	chr6:112825938-112826470	7	+	112825938	112825938	16724991	1	532,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	112971492	112971599	chr6:112971492-112971599	3	+	112971492	112971492	8553170	1	107,	0,
#Deleted in new
chr6	113010936	113011415	chr6:113010936-113011415	7	+	113010936	113010936	16724991	1	479,	0,
#Partially deleted in new
chr6	113222165	113224072	chr6:113222165-113224072	7	+	113222165	113222165	16724991	2	616,970,	0,937,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	113428539	113433421	chr6:113428539-113433421	3	-	113428539	113428539	789624	2	439,85,	0,4797,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	113428550	113432641	chr6:113428550-113432641	0	-	113428550	113428550	8553170	2	428,83,	0,4008,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	113531117	113543793	chr6:113531117-113543793	3	+	113531117	113531117	8553170	3	141,65,391,	0,10719,12285,
#Deleted in new
chr6	113581500	113581947	chr6:113581500-113581947	7	+	113581500	113581500	16724991	1	447,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	113616926	113650090	chr6:113616926-113650090	1	-	113616926	113616926	8553170	7	497,174,476,83,155,418,76,	0,5954,6244,6813,10594,32477,33088,
#Partially deleted in new
chr6	113623534	113650074	chr6:113623534-113650074	2	-	113623534	113623534	789624	3	112,155,60,	0,3986,26480,
#Partially deleted in new
chr6	113791828	113837368	chr6:113791828-113837368	3	-	113791828	113791828	8553170	2	315,60,	0,45480,
#Deleted in new
chr6	113839278	113839621	chr6:113839278-113839621	7	+	113839278	113839278	16724991	1	343,	0,
#Deleted in new
chr6	113857361	113863471	chr6:113857361-113863471	3	+	113857745	113860579	789624	2	486,3789,	0,2321,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	113868012	113873351	chr6:113868012-113873351	3	-	113868012	113868012	789624	3	2331,66,358,	0,2656,4981,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	113904137	113921642	chr6:113904137-113921642	3	+	113904137	113904137	5263520	4	607,110,351,1187,	0,12805,14969,16318,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	113933027	113971285	chr6:113933027-113971285	3	-	113941057	113970908	0	14	8061,58,156,131,109,141,109,93,142,139,75,118,113,429,	0,8680,10323,11252,12334,12980,15951,16140,20249,22985,23591,25621,26878,37829,
#Partially deleted in new
chr6	113940717	113971157	chr6:113940717-113971157	1	-	113941057	113959980	0	15	371,58,156,131,109,141,109,93,142,139,75,118,113,28,301,	0,990,2633,3562,4644,5290,8261,8450,12559,15295,15901,17931,19188,21649,30139,
#Partially deleted in new
chr6	113940717	113970724	chr6:113940717-113970724	1	-	113941057	113959980	0	14	371,58,156,131,109,141,109,93,142,139,75,118,113,245,	0,990,2633,3562,4644,5290,8261,8450,12559,15295,15901,17931,19188,29762,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	113940717	113956602	chr6:113940717-113956602	0	-	113940717	113940717	8553170	8	371,58,156,131,109,3253,142,590,	0,990,2633,3562,4644,5290,12559,15295,
#Partially deleted in new
chr6	113945379	113949323	chr6:113945379-113949323	0	-	113945379	113945379	8553170	4	91,141,109,156,	0,628,3599,3788,
#Partially deleted in new
chr6	113953399	113957286	chr6:113953399-113957286	0	-	113953399	113953399	8553170	3	19,139,668,	0,2613,3219,
#Partially deleted in new
chr6	113955926	113970878	chr6:113955926-113970878	0	-	113955993	113970878	789624	5	225,75,118,113,22,	0,692,2722,3979,14930,
#Partially deleted in new
chr6	113956109	113968530	chr6:113956109-113968530	0	-	113956109	113959980	789624	5	42,75,118,113,201,	0,509,2539,3796,12220,
#Partially deleted in new
chr6	113956118	113970495	chr6:113956118-113970495	0	-	113956118	113959980	789624	5	33,75,118,113,241,	0,500,2530,3787,14136,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	113956628	114011308	chr6:113956628-114011308	0	-	113956628	113959980	789624	5	65,118,113,28,178,	0,2020,3277,5738,54502,
#Partially deleted in new
chr6	113956669	113971137	chr6:113956669-113971137	0	-	113956669	113970908	789624	4	24,118,134,281,	0,1979,3236,14187,
#Partially deleted in new
chr6	113956673	113970729	chr6:113956673-113970729	0	-	113956673	113959980	789624	5	20,118,113,63,250,	0,1975,3232,11960,13806,
#Partially deleted in new
chr6	113956689	113970710	chr6:113956689-113970710	0	-	113956689	113959980	789624	6	4,118,113,28,63,231,	0,1959,3216,5677,11944,13790,
#Partially deleted in new
chr6	113958426	113971136	chr6:113958426-113971136	0	-	113958426	113958426	8553170	3	340,113,280,	0,1479,12430,
#Partially deleted in new
chr6	113958661	113971126	chr6:113958661-113971126	0	-	113958661	113959980	789624	4	105,113,63,270,	0,1244,9972,12195,
#Partially deleted in new
chr6	113958683	113971139	chr6:113958683-113971139	0	-	113958683	113959980	789624	5	83,113,28,63,283,	0,1222,3683,9950,12173,
#Partially deleted in new
chr6	113959609	113971137	chr6:113959609-113971137	0	-	113959609	113959609	8553170	2	409,281,	0,11247,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	113969700	114340738	chr6:113969700-114340738	3	+	113969700	113969700	789624	10	578,126,145,461,83,63,68,133,142,217,	0,22192,23642,25899,119236,146417,208952,209324,265929,370821,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	113969953	113993463	chr6:113969953-113993463	0	+	113969953	113969953	8553170	3	325,122,121,	0,21939,23389,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	113970105	113995644	chr6:113970105-113995644	1	+	113970105	113970105	8553170	4	173,228,145,45,	0,21787,23237,25494,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	113970234	113995802	chr6:113970234-113995802	0	+	113970234	113970234	8553170	4	89,126,145,203,	0,21658,23108,25365,
#Partially deleted in new
chr6	113971494	113993356	chr6:113971494-113993356	0	+	113971494	113971494	8553170	3	281,295,14,	0,20398,21848,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	113971495	113995815	chr6:113971495-113995815	1	+	113971495	113971495	8553170	4	120,122,145,216,	0,20397,21847,24104,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	113971517	113995869	chr6:113971517-113995869	1	+	113971517	113971517	8553170	4	98,295,145,270,	0,20375,21825,24082,
#Partially deleted in new
chr6	113995143	113999798	chr6:113995143-113999798	0	+	113995143	113995143	8553170	3	108,461,262,	0,456,4393,
#Deleted in new
chr6	113995243	113995915	chr6:113995243-113995915	0	+	113995243	113995243	8553170	2	252,316,	0,356,
#Partially deleted in new
chr6	113995954	114235716	chr6:113995954-114235716	1	+	113995954	113995954	8553170	4	106,133,167,87,	0,183070,234202,239675,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	113995974	114059788	chr6:113995974-114059788	1	+	113995974	113995974	8553170	2	86,1158,	0,62656,
#Partially deleted in new
chr6	114019620	114020483	chr6:114019620-114020483	7	-	114019620	114019620	16724991	2	120,435,	0,428,
#Partially deleted in new
chr6	114055585	114343045	chr6:114055585-114343045	3	-	114057256	114062845	0	5	2605,139,112,194,851,	0,7153,112765,172999,286609,
#Partially deleted in new
chr6	114055585	114062877	chr6:114055585-114062877	1	-	114057256	114062845	0	2	2605,139,	0,7153,
#Deleted in new
chr6	114084167	114084792	chr6:114084167-114084792	7	-	114084167	114084167	16724991	1	625,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	114084568	114143918	chr6:114084568-114143918	1	+	114084568	114084568	8553170	6	55,83,63,54,235,300,	0,4368,31549,46644,58218,59050,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	114112385	114132303	chr6:114112385-114132303	0	+	114112385	114112385	8553170	4	105,63,54,224,	0,3732,18827,19694,
#Deleted in new
chr6	114167476	114168450	chr6:114167476-114168450	0	-	114167476	114167476	8553170	2	203,96,	0,878,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	114220680	114220786	chr6:114220680-114220786	7	-	114220680	114220680	16724991	1	106,	0,
#Partially deleted in new
chr6	114230140	114239199	chr6:114230140-114239199	0	+	114230140	114230140	8553170	3	206,142,211,	0,5489,8848,
#Partially deleted in new
chr6	114231347	114251919	chr6:114231347-114251919	0	+	114231347	114231347	8553170	3	94,142,401,	0,4282,20171,
#Partially deleted in new
chr6	114281811	114468574	chr6:114281811-114468574	1	+	114281811	114281811	8553170	6	197,94,101,26,65,80,	0,58710,89780,124831,167155,186683,
#Partially deleted in new
chr6	114349482	114350648	chr6:114349482-114350648	7	-	114349482	114349482	16724991	1	1166,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	114425611	114471705	chr6:114425611-114471705	1	+	114425611	114425611	8553170	6	61,98,65,117,154,291,	0,12357,23355,42883,43534,45803,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	114448959	114456634	chr6:114448959-114456634	1	+	114448959	114448959	8553170	2	72,778,	0,6897,
#Partially deleted in new
chr6	114477349	114488681	chr6:114477349-114488681	0	-	114477349	114477349	8553170	2	157,94,	0,11238,
#Partially deleted in new
chr6	114481424	114488752	chr6:114481424-114488752	3	-	114481424	114481424	8553170	2	621,165,	0,7163,
#Partially deleted in new
chr6	114523450	114535875	chr6:114523450-114535875	3	-	114523450	114523450	8553170	2	242,160,	0,12265,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	114866872	114866976	chr6:114866872-114866976	3	-	114866872	114866872	8553170	1	104,	0,
#Deleted in new
chr6	115358497	115358752	chr6:115358497-115358752	7	-	115358497	115358497	16724991	1	255,	0,
#Deleted in new
chr6	115633541	115634191	chr6:115633541-115634191	3	-	115633541	115633541	8553170	2	231,52,	0,598,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	115931148	116060758	chr6:115931148-116060758	3	-	115942413	116060311	789624	8	11477,166,182,159,169,164,122,791,	0,11871,13095,25303,36402,37427,72728,128819,
#Deleted in new
chr6	116038755	116039495	chr6:116038755-116039495	7	+	116038755	116038755	16724991	1	740,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	116100848	116249497	chr6:116100848-116249497	3	+	116100930	116244024	789624	12	175,92,72,107,80,85,175,98,119,162,169,5589,	0,5395,7515,10001,14842,17012,120205,122185,136117,137338,138106,143060,
#Partially deleted in new
chr6	116100850	116145495	chr6:116100850-116145495	0	+	116100930	116145495	789624	7	173,92,72,107,80,85,58,	0,5393,7513,9999,14840,17010,44587,
#Partially deleted in new
chr6	116110851	116118092	chr6:116110851-116118092	0	+	116110851	116110851	8553170	3	105,80,232,	0,4839,7009,
#Partially deleted in new
chr6	116117918	116239123	chr6:116117918-116239123	0	+	116117918	116237488	789624	7	27,151,98,119,181,162,169,	0,103159,105115,119047,119540,120268,121036,
#Deleted in new
chr6	116118922	116126133	chr6:116118922-116126133	3	-	116120072	116125492	0	3	3039,169,81,	0,6416,7130,
#Deleted in new
chr6	116119025	116125900	chr6:116119025-116125900	1	-	116120072	116125492	0	2	2936,562,	0,6313,
#Deleted in new
chr6	116121466	116126120	chr6:116121466-116126120	0	-	116121466	116125492	789624	3	495,169,68,	0,3872,4586,
#Partially deleted in new
chr6	116125338	116158747	chr6:116125338-116158747	0	-	116125338	116125492	789624	2	169,134,	0,33275,
#Deleted in new
chr6	116137057	116137572	chr6:116137057-116137572	7	-	116137057	116137057	16724991	1	515,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	116244186	116244728	chr6:116244186-116244728	3	-	116244186	116244186	8553170	2	182,239,	0,303,
#Deleted in new
chr6	116249960	116254140	chr6:116249960-116254140	3	-	116252763	116254008	789624	1	4180,	0,
#Partially deleted in new
chr6	116254172	116426589	chr6:116254172-116426589	0	+	116399250	116426589	789624	4	123,522,469,16,	0,4273,145025,172401,
#Partially deleted in new
chr6	116254176	116435765	chr6:116254176-116435765	1	+	116399250	116435603	789624	5	207,522,469,254,179,	0,4269,145021,172397,181410,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	116254206	116256743	chr6:116254206-116256743	0	+	116254206	116254206	789624	2	177,1904,	0,633,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	116254206	116259240	chr6:116254206-116259240	0	+	116254206	116254206	8553170	4	177,163,122,795,	0,633,3009,4239,
#Deleted in new
chr6	116258492	116259115	chr6:116258492-116259115	7	-	116258492	116258492	16724991	1	623,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	116276577	116279903	chr6:116276577-116279903	3	-	116278516	116279830	789624	1	3326,	0,
#Partially deleted in new
chr6	116279142	116401272	chr6:116279142-116401272	0	+	116279142	116279142	8553170	2	589,2075,	0,120055,
#Partially deleted in new
chr6	116280070	116370216	chr6:116280070-116370216	0	+	116280070	116280070	789624	3	190,103,102,	0,89754,90044,
#Partially deleted in new
chr6	116280107	116399937	chr6:116280107-116399937	1	+	116399250	116399670	789624	4	153,209,103,740,	0,86901,89717,119090,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	116280119	116444860	chr6:116280119-116444860	3	+	116399250	116437345	789624	6	141,469,254,240,208,9274,	0,119078,146454,150834,153223,155467,
#Partially deleted in new
chr6	116280153	116366496	chr6:116280153-116366496	0	+	116280153	116280153	8553170	5	107,116,91,137,414,	0,7937,8249,75526,85929,
#Partially deleted in new
chr6	116280198	116370273	chr6:116280198-116370273	0	+	116280198	116280198	789624	5	62,137,1135,103,159,	0,75481,85884,89626,89916,
#Partially deleted in new
chr6	116280217	116370273	chr6:116280217-116370273	0	+	116280217	116280217	789624	4	43,209,103,159,	0,86791,89607,89897,
#Partially deleted in new
chr6	116369846	116399659	chr6:116369846-116399659	0	+	116399250	116399659	789624	2	81,462,	0,29351,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	116370357	116441261	chr6:116370357-116441261	1	+	116399250	116437345	789624	7	139,252,469,254,240,208,5675,	0,512,28840,56216,60596,62985,65229,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	116370946	116444857	chr6:116370946-116444857	1	+	116399250	116437345	789624	6	175,469,254,240,208,9271,	0,28251,55627,60007,62396,64640,
#Partially deleted in new
chr6	116370986	116438139	chr6:116370986-116438139	1	+	116399250	116435603	789624	4	135,469,254,2553,	0,28211,55587,64600,
#Partially deleted in new
chr6	116371049	116438243	chr6:116371049-116438243	1	+	116399250	116435603	789624	5	72,469,254,240,2657,	0,28148,55524,59904,64537,
#Partially deleted in new
chr6	116399394	116463696	chr6:116399394-116463696	3	+	116399394	116463365	789624	4	272,254,240,414,	0,27179,31559,63888,
#Partially deleted in new
chr6	116412464	116426726	chr6:116412464-116426726	0	+	116412464	116412464	8553170	3	340,45,153,	0,10645,14109,
#Deleted in new
chr6	116432528	116438277	chr6:116432528-116438277	0	+	116432528	116432528	8553170	2	1022,2691,	0,3058,
#Partially deleted in new
chr6	116453013	116453565	chr6:116453013-116453565	7	-	116453013	116453013	16724991	1	552,	0,
#Deleted in new
chr6	116457322	116458669	chr6:116457322-116458669	7	-	116457322	116457322	16724991	1	1347,	0,
#Deleted in new
chr6	116460738	116463692	chr6:116460738-116463692	3	-	116460738	116460738	8553170	2	456,74,	0,2880,
#Deleted in new
chr6	116461369	116463768	chr6:116461369-116463768	1	+	116461420	116463705	789624	2	60,486,	0,1913,
#Deleted in new
chr6	116461392	116463779	chr6:116461392-116463779	3	+	116461929	116463705	789624	3	37,583,497,	0,479,1890,
#Deleted in new
chr6	116462466	116463768	chr6:116462466-116463768	0	+	116462466	116463705	789624	2	54,486,	0,816,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	116492296	116497099	chr6:116492296-116497099	3	+	116492296	116492296	8553170	3	111,122,504,	0,2507,4299,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	116494988	116512343	chr6:116494988-116512343	1	-	116496953	116500654	789624	3	2085,186,150,	0,5492,17205,
#Partially deleted in new
chr6	116496482	116545610	chr6:116496482-116545610	3	-	116496953	116545514	789624	5	591,186,100,98,138,	0,3998,43880,46820,48990,
#Partially deleted in new
chr6	116496482	116543400	chr6:116496482-116543400	0	-	116496953	116543400	789624	4	591,186,100,98,	0,3998,43880,46820,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	116511645	116524792	chr6:116511645-116524792	3	+	116511696	116515989	789624	2	591,9193,	0,3954,
#Partially deleted in new
chr6	116529012	116558588	chr6:116529012-116558588	1	+	116543813	116558211	789624	4	178,108,67,764,	0,14752,25272,28812,
#Partially deleted in new
chr6	116529031	116558868	chr6:116529031-116558868	1	+	116557824	116558211	789624	3	159,108,1044,	0,14733,28793,
#Partially deleted in new
chr6	116529045	116558575	chr6:116529045-116558575	1	+	116554222	116558211	789624	4	145,108,161,751,	0,14719,25145,28779,
#Partially deleted in new
chr6	116529045	116558194	chr6:116529045-116558194	0	+	116557824	116558194	789624	3	90,108,370,	0,14719,28779,
#Partially deleted in new
chr6	116553749	116558575	chr6:116553749-116558575	3	+	116553793	116558211	789624	2	602,751,	0,4075,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	116571366	116597675	chr6:116571366-116597675	3	+	116571582	116593101	0	7	289,66,131,144,133,63,4696,	0,8928,13360,17475,18905,19521,21613,
#Partially deleted in new
chr6	116571408	116590298	chr6:116571408-116590298	0	+	116588859	116590298	789624	7	247,128,114,66,131,144,27,	0,1449,2649,8886,13318,17433,18863,
#Partially deleted in new
chr6	116571488	116593588	chr6:116571488-116593588	1	+	116588859	116593101	0	8	167,114,66,131,144,133,63,609,	0,2569,8806,13238,17353,18783,19399,21491,
#Partially deleted in new
chr6	116571508	116584831	chr6:116571508-116584831	0	+	116571508	116571508	8553170	4	147,128,66,105,	0,1349,8786,13218,
#Partially deleted in new
chr6	116571562	116590361	chr6:116571562-116590361	0	+	116588859	116590361	789624	6	93,57,66,131,144,90,	0,859,8732,13164,17279,18709,
#Partially deleted in new
chr6	116580206	116590347	chr6:116580206-116590347	0	+	116588859	116590347	789624	4	154,131,144,76,	0,4520,8635,10065,
#Partially deleted in new
chr6	116616478	116632985	chr6:116616478-116632985	1	+	116616623	116632229	789624	5	831,235,741,118,779,	0,6289,11150,13956,15728,
#Partially deleted in new
chr6	116616486	116632978	chr6:116616486-116632978	3	+	116616623	116632441	789624	6	823,235,741,136,118,772,	0,6281,11142,13080,13948,15720,
#Partially deleted in new
chr6	116616623	116632441	chr6:116616623-116632441	1	+	116616623	116632441	789624	5	686,235,136,118,235,	0,6144,12943,13811,15583,
#Partially deleted in new
chr6	116635617	116668794	chr6:116635617-116668794	3	-	116635831	116667192	0	10	262,221,152,166,189,169,122,111,574,229,	0,10096,11841,15954,16386,21066,23185,25118,31016,32948,
#Partially deleted in new
chr6	116635617	116646258	chr6:116635617-116646258	0	-	116635617	116635617	8553170	2	262,545,	0,10096,
#Partially deleted in new
chr6	116652003	116668794	chr6:116652003-116668794	1	-	116652141	116667192	789624	5	189,122,111,574,229,	0,6799,8732,14630,16562,
#Partially deleted in new
chr6	116652003	116668794	chr6:116652003-116668794	0	-	116652003	116652003	8553170	7	189,169,122,137,111,279,229,	0,4680,6799,8229,8732,14630,16562,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	116681186	116741866	chr6:116681186-116741866	3	+	116681334	116732323	789624	14	152,134,102,100,95,132,89,100,164,79,126,128,179,9731,	0,8133,10868,11106,17517,20832,23885,35032,40939,43110,44564,45308,48376,50949,
#Partially deleted in new
chr6	116681186	116698798	chr6:116681186-116698798	0	+	116689324	116698798	789624	6	152,106,134,102,100,95,	0,260,8133,10868,11106,17517,
#Partially deleted in new
chr6	116681210	116741866	chr6:116681210-116741866	1	+	116681334	116732323	789624	15	128,134,102,100,95,132,89,100,164,79,126,128,179,233,361,	0,8109,10844,11082,17493,20808,23861,35008,40915,43086,44540,45284,48352,50925,60295,
#Partially deleted in new
chr6	116752196	116765723	chr6:116752196-116765723	3	-	116752596	116765576	789624	4	499,109,109,319,	0,9780,12950,13208,
#Partially deleted in new
chr6	116792084	116829035	chr6:116792084-116829035	3	-	116792141	116829013	789624	6	1166,124,213,837,304,216,	0,3627,8499,14285,17229,36735,
#Partially deleted in new
chr6	116792111	116829037	chr6:116792111-116829037	1	-	116792141	116829013	789624	5	1139,124,837,304,218,	0,3600,14258,17202,36708,
#Partially deleted in new
chr6	116792111	116829037	chr6:116792111-116829037	1	-	116792141	116829013	789624	6	1139,124,213,312,304,218,	0,3600,8472,14783,17202,36708,
#Partially deleted in new
chr6	116877211	116923528	chr6:116877211-116923528	0	+	116877211	116877211	8553170	14	287,157,124,62,78,28,108,78,114,50,160,145,110,422,	0,584,3332,5155,16775,17968,33723,38796,38989,40825,41925,43098,44830,45895,
#Partially deleted in new
chr6	116877259	116932163	chr6:116877259-116932163	3	+	116877275	116931506	789624	19	239,157,124,62,78,28,108,78,114,50,160,145,110,118,123,207,513,213,833,	0,536,3284,5107,16727,17920,33675,38748,38941,40777,41877,43050,44782,45847,47409,48193,49767,51499,54071,
#Partially deleted in new
chr6	116884788	116918110	chr6:116884788-116918110	0	+	116884788	116884788	8553170	7	257,78,28,108,78,114,74,	0,9198,10391,26146,31219,31412,33248,
#Deleted in new
chr6	117048669	117048838	chr6:117048669-117048838	7	-	117048669	117048669	16724991	1	169,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	117060681	117060799	chr6:117060681-117060799	7	+	117060681	117060681	16724991	1	118,	0,
#Partially deleted in new
chr6	117265557	117273565	chr6:117265557-117273565	1	+	117265763	117272494	789624	3	287,310,1112,	0,2624,6896,
#Partially deleted in new
chr6	117265573	117273562	chr6:117265573-117273562	3	+	117265763	117272494	789624	4	271,310,522,1109,	0,2608,4969,6880,
#Partially deleted in new
chr6	117288299	117425855	chr6:117288299-117425855	1	-	117288491	117425656	789624	44	503,164,135,201,98,130,65,163,136,84,191,118,169,177,233,145,203,177,287,206,203,64,263,145,161,215,101,192,179,111,213,497,98,185,123,77,202,139,149,61,27,60,45,322,	0,12674,20494,21781,22720,28843,29888,31568,32959,36032,37924,41029,48872,52835,53100,54100,55760,64690,68329,69504,71509,72042,74303,76760,77281,77776,90759,95017,97383,98589,99480,101050,104924,105862,106316,107888,108615,114839,115980,121282,126219,127958,130162,137234,
#Partially deleted in new
chr6	117288299	117425855	chr6:117288299-117425855	3	-	117288491	117425656	0	43	503,164,135,201,98,130,65,163,136,84,191,118,169,177,233,145,203,180,287,206,203,64,263,145,161,215,101,192,179,111,255,497,98,185,123,77,202,139,149,61,60,45,322,	0,12674,20494,21781,22720,28843,29888,31568,32959,36032,37924,41029,48872,52835,53100,54100,55760,64690,68329,69504,71509,72042,74303,76760,77281,77776,90759,95017,97383,98589,99480,101050,104924,105862,106316,107888,108615,114839,115980,121282,127958,130162,137234,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	117299363	117299638	chr6:117299363-117299638	3	+	117299363	117299363	8553170	1	275,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	117301454	117301758	chr6:117301454-117301758	3	+	117301454	117301454	8553170	1	304,	0,
#Partially deleted in new
chr6	117318210	117573571	chr6:117318210-117573571	3	-	117318210	117573571	789624	7	42,163,178,181,165,96,105,	0,1657,3006,248643,251361,252649,255256,
#Partially deleted in new
chr6	117328419	117337340	chr6:117328419-117337340	0	-	117328806	117337340	789624	3	394,118,169,	0,909,8752,
#Partially deleted in new
chr6	117431590	117432442	chr6:117431590-117432442	7	+	117431590	117431590	16724991	2	463,86,	0,766,
#Partially deleted in new
chr6	117451129	117453525	chr6:117451129-117453525	3	-	117451129	117451129	8553170	2	189,119,	0,2277,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	117453816	117503964	chr6:117453816-117503964	0	+	117453816	117453816	8553170	4	81,125,138,198,	0,26529,27045,49950,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	117453816	117494866	chr6:117453816-117494866	0	+	117453816	117453816	8553170	5	81,110,125,138,111,	0,10239,26529,27045,40939,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	117453833	117485042	chr6:117453833-117485042	0	+	117453833	117453833	8553170	4	64,125,138,93,	0,26512,27028,31116,
#Partially deleted in new
chr6	117482639	117503899	chr6:117482639-117503899	0	+	117482639	117482639	8553170	3	254,91,133,	0,2310,21127,
#Partially deleted in new
chr6	117482656	117569858	chr6:117482656-117569858	3	+	117482781	117569624	789624	15	237,213,135,52,73,134,41,216,125,148,108,88,50,120,239,	0,21110,37159,38868,42705,49603,54528,55963,56598,58011,58261,60467,61871,62821,86963,
#Partially deleted in new
chr6	117482661	117549797	chr6:117482661-117549797	1	+	117482781	117548439	789624	15	232,213,135,52,73,134,41,216,125,148,108,88,50,120,1891,	0,21105,37154,38863,42700,49598,54523,55958,56593,58006,58256,60462,61866,62816,65245,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	117503558	117569858	chr6:117503558-117569858	0	+	117503558	117503558	8553170	11	421,135,52,134,41,2196,108,88,50,120,239,	0,16257,17966,28701,33626,35061,37359,39565,40969,41919,66061,
#Partially deleted in new
chr6	117503783	117508115	chr6:117503783-117508115	0	+	117503783	117503783	8553170	2	196,101,	0,4231,
#Partially deleted in new
chr6	117538774	117547928	chr6:117538774-117547928	0	+	117538774	117543129	789624	7	61,125,108,88,50,120,22,	0,480,2143,4349,5753,6703,9132,
#Partially deleted in new
chr6	117539308	117547979	chr6:117539308-117547979	0	+	117539308	117539308	8553170	6	71,148,108,50,120,73,	0,1359,1609,5219,6169,8598,
#Partially deleted in new
chr6	117540917	117547931	chr6:117540917-117547931	0	+	117540917	117540917	8553170	5	108,88,46,120,25,	0,2206,3614,4560,6989,
#Deleted in new
chr6	117544269	117545556	chr6:117544269-117545556	0	+	117544269	117544269	8553170	2	308,79,	0,1208,
#Partially deleted in new
chr6	117560268	117602528	chr6:117560268-117602528	3	-	117563253	117602288	0	8	3116,181,165,96,166,176,165,525,	0,6585,9303,10591,13198,14908,18631,41735,
#Partially deleted in new
chr6	117560268	117602364	chr6:117560268-117602364	1	-	117563253	117602288	0	9	3116,181,165,96,166,176,24,165,361,	0,6585,9303,10591,13198,14908,17179,18631,41735,
#Partially deleted in new
chr6	117560271	117602542	chr6:117560271-117602542	1	-	117563253	117602288	789624	8	3113,181,96,166,176,24,165,539,	0,6582,10588,13195,14905,17176,18628,41732,
#Partially deleted in new
chr6	117633705	117645087	chr6:117633705-117645087	7	+	117633705	117633705	16724991	2	905,466,	0,10916,
#Partially deleted in new
chr6	117675501	117710640	chr6:117675501-117710640	3	+	117675670	117707015	789624	5	584,126,150,100,3716,	0,17540,18529,28103,31423,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	117907525	118317676	chr6:117907525-118317676	3	+	117907726	118314252	789624	8	374,176,128,160,157,53,155,3649,	0,246919,327983,359469,367933,369968,377658,406502,
#Partially deleted in new
chr6	117998974	117999448	chr6:117998974-117999448	7	+	117998974	117998974	16724991	1	474,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	118154441	118317676	chr6:118154441-118317676	1	+	118154448	118314252	789624	7	179,128,160,157,53,155,3649,	0,81067,112553,121017,123052,130742,159586,
#Deleted in new
chr6	118452468	118454992	chr6:118452468-118454992	7	-	118452468	118452468	16724991	1	2524,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	118460771	118651891	chr6:118460771-118651891	3	-	118465404	118651269	789624	13	4797,232,108,51,118,155,153,180,118,119,788,159,695,	0,8300,9765,19099,19624,21007,22934,30914,50526,63030,104757,171681,190425,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	118460780	118710075	chr6:118460780-118710075	1	-	118465404	118652781	789624	14	4788,232,108,51,118,155,153,180,118,119,788,159,109,40,	0,8291,9756,19090,19615,20998,22925,30905,50517,63021,104748,171672,191919,249255,
#Partially deleted in new
chr6	118481802	118710075	chr6:118481802-118710075	0	-	118481802	118652781	789624	9	131,153,180,118,119,788,159,109,40,	0,1903,9883,29495,41999,83726,150650,170897,228233,
#Partially deleted in new
chr6	118491430	118652520	chr6:118491430-118652520	1	-	118491631	118566242	789624	6	435,118,119,788,159,117,	0,19867,32371,74098,141022,160973,
#Partially deleted in new
chr6	118491430	118710068	chr6:118491430-118710068	1	-	118491631	118652781	789624	8	435,118,119,788,159,109,111,33,	0,19867,32371,74098,141022,161269,172980,218605,
#Partially deleted in new
chr6	118491631	118651857	chr6:118491631-118651857	1	-	118491631	118651269	789624	6	234,118,119,788,159,661,	0,19666,32170,73897,140821,159565,
#Deleted in new
chr6	118501429	118502906	chr6:118501429-118502906	7	+	118501429	118501429	16724991	1	1477,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	118548297	118560730	chr6:118548297-118560730	3	+	118558921	118559080	0	2	95,1906,	0,10527,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	118565034	118652547	chr6:118565034-118652547	0	-	118565034	118565034	8553170	3	1282,159,144,	0,67418,87369,
#Partially deleted in new
chr6	118565558	118574068	chr6:118565558-118574068	0	-	118565558	118565558	8553170	2	758,78,	0,8432,
#Partially deleted in new
chr6	118566054	118647105	chr6:118566054-118647105	0	-	118566054	118566054	8553170	3	262,159,199,	0,66398,80852,
#Partially deleted in new
chr6	118566091	118647105	chr6:118566091-118647105	0	-	118566091	118566091	8553170	4	225,159,33,66,	0,66361,80815,80948,
#Partially deleted in new
chr6	118589069	118589634	chr6:118589069-118589634	7	+	118589069	118589069	16724991	1	565,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	118656762	118664521	chr6:118656762-118664521	0	-	118656762	118656762	8553170	2	359,111,	0,7648,
#Partially deleted in new
chr6	118757517	118783420	chr6:118757517-118783420	7	+	118757517	118757517	16724991	3	87,383,709,	0,21705,25194,
#Deleted in new
chr6	118782847	118783131	chr6:118782847-118783131	5	+	118782847	118782847	16724991	1	284,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	118813441	118935162	chr6:118813441-118935162	3	-	118814823	118931723	789624	13	2853,146,83,204,203,175,120,126,201,82,317,319,272,	0,12705,13340,14485,15606,42929,98208,99853,104119,108563,110369,117978,121449,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	118813448	118931738	chr6:118813448-118931738	1	-	118814823	118931723	789624	12	2846,146,83,204,203,175,120,126,201,82,317,319,	0,12698,13333,14478,15599,42922,98201,99846,104112,108556,110362,117971,
#Partially deleted in new
chr6	118816180	118829253	chr6:118816180-118829253	0	-	118816180	118829253	789624	4	114,146,83,206,	0,9966,10601,12867,
#Partially deleted in new
chr6	118828013	118894356	chr6:118828013-118894356	0	-	118828013	118828013	8553170	4	117,203,175,330,	0,1034,28357,66013,
#Partially deleted in new
chr6	118829027	118894272	chr6:118829027-118894272	0	-	118829027	118829027	8553170	2	223,246,	0,64999,
#Partially deleted in new
chr6	118894219	118909167	chr6:118894219-118909167	3	+	118894413	118907614	0	4	303,116,177,1766,	0,6546,11432,13182,
#Partially deleted in new
chr6	118894220	118901036	chr6:118894220-118901036	0	+	118894220	118894220	8553170	2	302,271,	0,6545,
#Partially deleted in new
chr6	118910596	118935114	chr6:118910596-118935114	1	-	118911623	118931723	789624	7	1173,126,201,82,317,319,224,	0,2698,6964,11408,13214,20823,24294,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	118910596	118924052	chr6:118910596-118924052	0	-	118910596	118910596	8553170	3	2824,4526,242,	0,6964,13214,
#Partially deleted in new
chr6	118923962	118935024	chr6:118923962-118935024	0	-	118923962	118931723	789624	4	165,319,134,134,	0,7457,8644,10928,
#Partially deleted in new
chr6	118931489	118934476	chr6:118931489-118934476	0	-	118931489	118931723	789624	3	249,134,87,	0,1117,2900,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	118934769	119182745	chr6:118934769-119182745	3	+	118934769	118934769	8553170	5	221,128,107,79,1277,	0,71713,96635,245087,246699,
#Partially deleted in new
chr6	118959762	118975988	chr6:118959762-118975988	0	-	118960102	118975988	789624	6	422,203,118,147,185,72,	0,1998,7072,14665,15261,16154,
#Partially deleted in new
chr6	118959828	119078743	chr6:118959828-119078743	1	-	118960102	119078299	789624	18	356,203,105,118,147,185,128,154,213,151,122,162,123,198,182,136,855,603,	0,1932,4838,7006,14599,15195,16088,19536,20309,43070,43672,46618,51480,56918,60149,63116,64130,118312,
#Partially deleted in new
chr6	118959828	118964760	chr6:118959828-118964760	0	-	118960102	118964760	789624	3	356,35,94,	0,2100,4838,
#Partially deleted in new
chr6	118959829	119149387	chr6:118959829-119149387	3	-	118960102	119024612	789624	17	355,203,105,118,185,128,154,213,151,122,162,123,198,182,136,855,310,	0,1931,4837,7005,15194,16087,19535,20308,43069,43671,46617,51479,56917,60148,63115,64129,189248,
#Partially deleted in new
chr6	118959829	119149141	chr6:118959829-119149141	0	-	118960853	119024612	789624	19	355,95,203,105,118,147,185,128,154,213,151,122,162,123,198,182,136,855,64,	0,939,1931,4837,7005,14598,15194,16087,19535,20308,43069,43671,46617,51479,56917,60148,63115,64129,189248,
#Partially deleted in new
chr6	118959829	118964740	chr6:118959829-118964740	0	-	118960102	118964740	789624	3	355,68,74,	0,2099,4837,
#Deleted in new
chr6	118959829	118963920	chr6:118959829-118963920	0	-	118959829	118959829	8553170	2	355,2160,	0,1931,
#Partially deleted in new
chr6	118959832	119149187	chr6:118959832-119149187	1	-	118960102	119024612	789624	16	352,203,118,185,128,154,213,151,122,162,123,198,182,136,855,110,	0,1928,7002,15191,16084,19532,20305,43066,43668,46614,51476,56914,60145,63112,64126,189245,
#Partially deleted in new
chr6	118959832	118975962	chr6:118959832-118975962	1	-	118960853	118975955	789624	8	352,95,203,105,118,147,185,46,	0,936,1928,4834,7002,14595,15191,16084,
#Partially deleted in new
chr6	118959921	118974525	chr6:118959921-118974525	0	-	118960102	118974525	789624	5	263,95,105,118,98,	0,847,4745,6913,14506,
#Partially deleted in new
chr6	118960102	119078372	chr6:118960102-119078372	1	-	118960102	119078299	789624	16	82,203,118,185,128,154,213,151,122,162,123,198,182,136,855,232,	0,1658,6732,14921,15814,19262,20035,42796,43398,46344,51206,56644,59875,62842,63856,118038,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	119005286	119079179	chr6:119005286-119079179	1	-	119006041	119024612	789624	8	890,162,123,198,182,136,855,175,	0,1160,6022,11460,14691,17658,18672,73718,
#Partially deleted in new
chr6	119011176	119020066	chr6:119011176-119020066	0	-	119011293	119020066	789624	3	255,198,89,	0,5570,8801,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	119057879	119057974	chr6:119057879-119057974	3	+	119057879	119057879	8553170	1	95,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	119069046	119069143	chr6:119069046-119069143	3	-	119069046	119069046	5263520	1	97,	0,
#Deleted in new
chr6	119159296	119159476	chr6:119159296-119159476	7	+	119159296	119159296	16724991	1	180,	0,
#Partially deleted in new
chr6	119177208	119349761	chr6:119177208-119349761	3	-	119179818	119349065	789624	13	2737,116,173,220,116,94,124,95,81,116,97,825,220,	0,3103,11196,12455,16568,24045,27550,71051,113474,124779,129687,171254,172333,
#Deleted in new
chr6	119269132	119269714	chr6:119269132-119269714	7	-	119269132	119269132	16724991	1	582,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	119327280	119327385	chr6:119327280-119327385	3	+	119327280	119327280	8553170	1	105,	0,
#Deleted in new
chr6	120015178	120015257	chr6:120015178-120015257	3	+	120015178	120015178	5263520	1	79,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	120686620	120686742	chr6:120686620-120686742	7	+	120686620	120686620	16724991	1	122,	0,
#Deleted in new
chr6	120781219	120781512	chr6:120781219-120781512	7	+	120781219	120781219	16724991	1	293,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	121079493	121237062	chr6:121079493-121237062	0	-	121079493	121079493	8553170	12	1397,189,141,155,116,70,84,126,94,109,117,92,	0,11359,26529,33011,33568,35678,46884,52133,80516,81454,143742,157477,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr6	121080236	121334430	chr6:121080236-121334430	3	-	121080770	121334430	789624	33	654,189,141,155,116,70,84,126,94,109,123,89,117,119,88,139,83,202,125,143,93,141,91,60,145,62,104,79,126,69,178,162,155,	0,10616,25786,32268,32825,34935,46141,51390,79773,80711,90168,124838,142999,158833,161228,161964,175091,175847,198884,201307,203581,211816,214333,219209,223380,224128,224285,224518,227739,230542,237258,241396,254039,
#Boundary problem: need 36, got 0, diff 36, mapped 0.0
chr6	121080236	121334478	chr6:121080236-121334478	0	-	121317680	121334430	789624	36	654,189,141,155,116,576,84,126,63,94,109,123,168,89,117,89,119,88,139,83,202,125,143,93,141,91,60,145,62,104,79,126,69,196,162,203,	0,10616,25786,32268,32825,34935,46141,51390,59537,79773,80711,90168,112138,124838,142999,144126,158833,161228,161964,175091,175847,198884,201307,203581,211816,214333,219209,223380,224128,224285,224518,227739,230542,237258,241396,254039,
#Partially deleted in new
chr6	121080770	121334480	chr6:121080770-121334480	1	-	121080770	121334430	789624	32	120,189,141,155,116,70,84,126,94,109,89,117,119,88,139,83,202,125,143,93,141,91,60,145,62,104,79,126,69,178,162,205,	0,10082,25252,31734,32291,34401,45607,50856,79239,80177,124304,142465,158299,160694,161430,174557,175313,198350,200773,203047,211282,213799,218675,222846,223594,223751,223984,227205,230008,236724,240862,253505,
#Partially deleted in new
chr6	121080858	121106170	chr6:121080858-121106170	0	-	121080858	121080858	8553170	3	32,189,148,	0,9994,25164,
#Partially deleted in new
chr6	121112385	121160037	chr6:121112385-121160037	0	-	121129874	121160037	789624	7	274,116,70,84,56,126,28,	0,676,2786,13992,17483,19241,47624,
#Partially deleted in new
chr6	121308024	121334745	chr6:121308024-121334745	0	-	121308024	121334430	789624	6	77,69,178,162,156,128,	0,2754,9470,13608,26251,26593,
#Deleted in new
chr6	121354353	121354460	chr6:121354353-121354460	3	+	121354353	121354353	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	121378796	121378898	chr6:121378796-121378898	3	-	121378796	121378796	8553170	1	102,	0,
#Deleted in new
chr6	121381471	121381860	chr6:121381471-121381860	7	+	121381471	121381471	16724991	1	389,	0,
#Deleted in new
chr6	121389323	121390357	chr6:121389323-121390357	7	+	121389323	121389323	16724991	2	240,141,	0,893,
#Partially deleted in new
chr6	121435576	121449727	chr6:121435576-121449727	3	+	121446847	121447996	789624	2	256,2896,	0,11255,
#Partially deleted in new
chr6	121435594	121449715	chr6:121435594-121449715	1	+	121446847	121447996	8553170	2	66,2884,	0,11237,
#Partially deleted in new
chr6	121435645	121449727	chr6:121435645-121449727	1	+	121446847	121447996	0	2	187,2896,	0,11186,
#Partially deleted in new
chr6	121437381	121449705	chr6:121437381-121449705	1	+	121446847	121447996	8553170	2	34,2874,	0,9450,
#Partially deleted in new
chr6	121437498	121448812	chr6:121437498-121448812	1	+	121446847	121447996	8553170	2	227,1981,	0,9333,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	121453980	121454121	chr6:121453980-121454121	3	-	121453980	121453980	8553170	1	141,	0,
#Partially deleted in new
chr6	121478272	121479908	chr6:121478272-121479908	7	-	121478272	121478272	16724991	4	104,188,181,191,	0,423,940,1445,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	121542485	121542626	chr6:121542485-121542626	3	-	121542485	121542485	8553170	1	141,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	121580331	121580521	chr6:121580331-121580521	3	-	121580331	121580331	8553170	1	190,	0,
#Partially deleted in new
chr6	121641008	121641221	chr6:121641008-121641221	7	-	121641008	121641008	16724991	1	213,	0,
#Deleted in new
chr6	121653794	121654690	chr6:121653794-121654690	7	+	121653794	121653794	16724991	1	896,	0,
#Deleted in new
chr6	121679971	121680459	chr6:121679971-121680459	7	-	121679971	121679971	16724991	1	488,	0,
#Deleted in new
chr6	121682924	121684272	chr6:121682924-121684272	7	+	121682924	121682924	16724991	1	1348,	0,
#Partially deleted in new
chr6	121858178	121858768	chr6:121858178-121858768	7	-	121858178	121858178	16724991	1	590,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	122211647	122211811	chr6:122211647-122211811	3	+	122211647	122211647	8553170	1	164,	0,
#Partially deleted in new
chr6	122399545	122432966	chr6:122399545-122432966	3	+	122399737	122432220	0	13	285,109,128,125,76,62,88,149,240,106,54,85,1042,	0,12827,13091,13979,16675,19622,20589,22604,23172,24035,28357,31884,32379,
#Partially deleted in new
chr6	122399550	122433119	chr6:122399550-122433119	1	+	122399737	122432220	0	12	280,109,128,125,76,62,88,149,240,106,85,1195,	0,12822,13086,13974,16670,19617,20584,22599,23167,24030,31879,32374,
#Partially deleted in new
chr6	122422155	122431992	chr6:122422155-122431992	0	+	122422155	122431992	789624	5	143,240,106,85,68,	0,562,1425,9274,9769,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	122436788	122439223	chr6:122436788-122439223	3	-	122436788	122436788	8553170	1	2435,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	122443353	122471822	chr6:122443353-122471822	3	-	122445043	122471737	789624	10	1826,231,145,91,170,138,80,170,162,124,	0,3420,3767,8310,8534,10416,10797,13127,15166,28345,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	122454357	122454612	chr6:122454357-122454612	7	+	122454357	122454357	16724991	1	255,	0,
#Partially deleted in new
chr6	122471916	122726372	chr6:122471916-122726372	1	+	122701487	122725195	789624	8	125,89,87,85,67,61,177,1245,	0,5934,114004,161366,203161,229523,245870,253211,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	122471922	122484161	chr6:122471922-122484161	3	+	122471922	122471922	8553170	2	119,6311,	0,5928,
#Partially deleted in new
chr6	122471930	122725890	chr6:122471930-122725890	3	+	122717794	122725195	789624	7	111,89,87,85,67,177,763,	0,5920,113990,161352,203147,245856,253197,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	122471933	122493475	chr6:122471933-122493475	0	+	122471933	122471933	8553170	5	108,89,58,120,254,	0,5917,9965,10213,21288,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	122471978	122586124	chr6:122471978-122586124	0	+	122471978	122471978	8553170	6	63,89,58,120,61,204,	0,5872,9920,10168,113514,113942,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	122482078	122633330	chr6:122482078-122633330	0	+	122482078	122482078	8553170	5	188,80,61,87,48,	0,99686,103414,103842,151204,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	122482087	122633330	chr6:122482087-122633330	0	+	122482087	122482087	8553170	4	179,80,87,48,	0,99677,103833,151195,
#Deleted in new
chr6	122531122	122531436	chr6:122531122-122531436	7	-	122531122	122531122	16724991	1	314,	0,
#Partially deleted in new
chr6	122610231	122725892	chr6:122610231-122725892	1	+	122717794	122725195	789624	6	304,85,67,163,177,765,	0,23051,64846,90830,107555,114896,
#Partially deleted in new
chr6	122610231	122725892	chr6:122610231-122725892	1	+	122717794	122725195	789624	5	304,85,67,177,765,	0,23051,64846,107555,114896,
#Partially deleted in new
chr6	122610231	122726372	chr6:122610231-122726372	1	+	122717794	122725195	789624	4	304,85,177,1245,	0,23051,107555,114896,
#Deleted in new
chr6	122643387	122644771	chr6:122643387-122644771	3	+	122643387	122643387	8553170	1	1384,	0,
#Partially deleted in new
chr6	122652731	122726373	chr6:122652731-122726373	1	+	122701487	122725195	789624	5	44,67,61,177,1246,	0,22346,48708,65055,72396,
#Partially deleted in new
chr6	122717560	122725892	chr6:122717560-122725892	1	+	122717794	122725195	789624	3	101,177,765,	0,226,7567,
#Partially deleted in new
chr6	122717561	122725281	chr6:122717561-122725281	1	+	122717767	122725195	789624	2	402,154,	0,7566,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	122745279	122745529	chr6:122745279-122745529	3	+	122745279	122745279	8553170	1	250,	0,
#Partially deleted in new
chr6	122779474	122784074	chr6:122779474-122784074	3	+	122779794	122783767	0	4	393,173,102,358,	0,816,1618,4242,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	122779758	122782896	chr6:122779758-122782896	1	+	122779794	122781347	0	3	109,173,1804,	0,532,1334,
#Partially deleted in new
chr6	122789048	122809717	chr6:122789048-122809717	1	+	122796890	122809408	0	7	410,145,97,170,181,125,627,	0,7775,12261,14615,15860,17184,20042,
#Partially deleted in new
chr6	122789169	122809720	chr6:122789169-122809720	3	+	122789346	122809408	0	8	289,214,145,97,170,181,125,630,	0,6507,7654,12140,14494,15739,17063,19921,
#Partially deleted in new
chr6	122789291	122797345	chr6:122789291-122797345	0	+	122789291	122789291	8553170	3	167,214,522,	0,6385,7532,
#Partially deleted in new
chr6	122859677	122859988	chr6:122859677-122859988	7	-	122859677	122859677	16724991	1	311,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	122975197	122996061	chr6:122975197-122996061	3	-	122975197	122975197	8553170	4	3588,161,257,134,	0,19128,19384,20730,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	122995970	123072927	chr6:122995970-123072927	3	+	122997777	123063761	789624	6	776,948,175,111,221,9254,	0,1248,15014,52651,59835,67703,
#Partially deleted in new
chr6	122996688	123064467	chr6:122996688-123064467	1	+	123011033	123063761	789624	5	58,175,111,221,794,	0,14296,51933,59117,66985,
#Partially deleted in new
chr6	123216338	123637093	chr6:123216338-123637093	3	-	123218600	123636775	789624	41	2402,36,39,24,45,36,39,27,21,45,18,48,48,27,30,30,27,39,51,51,48,48,27,27,33,21,30,30,54,60,60,78,60,183,60,66,60,33,159,210,340,	0,5148,7754,36073,38742,39528,43285,44273,48979,51368,53510,54800,56625,56998,58302,61979,62717,100118,115540,121280,136200,149796,159266,161377,161527,165031,165779,172183,177285,221724,222605,248567,280854,287380,295964,299802,314167,331001,332115,354584,420415,
#Partially deleted in new
chr6	123389420	123471759	chr6:123389420-123471759	1	+	123389420	123389420	8553170	9	55,143,106,65,95,107,175,115,2123,	0,22294,29059,32163,39710,44515,50182,79395,80216,
#Partially deleted in new
chr6	123439641	123468930	chr6:123439641-123468930	1	+	123439641	123439641	8553170	2	136,115,	0,29174,
#Partially deleted in new
chr6	123439641	123468930	chr6:123439641-123468930	1	+	123439641	123439641	8553170	3	136,112,131,	0,22605,29158,
#Partially deleted in new
chr6	123439677	123470079	chr6:123439677-123470079	0	+	123439677	123439677	8553170	3	100,131,443,	0,29122,29959,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	123439677	123463072	chr6:123439677-123463072	0	+	123439677	123439677	8553170	3	100,112,351,	0,22569,23044,
#Partially deleted in new
chr6	123439677	123469950	chr6:123439677-123469950	0	+	123439677	123439677	8553170	4	100,112,115,314,	0,22569,29138,29959,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	123439677	123442326	chr6:123439677-123442326	0	+	123439677	123439677	8553170	2	100,326,	0,2323,
#Deleted in new
chr6	123439684	123441112	chr6:123439684-123441112	2	+	123439684	123439684	8553170	2	93,162,	0,1266,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	123439705	123510241	chr6:123439705-123510241	0	+	123439705	123439705	8553170	4	72,112,115,796,	0,22541,29110,69740,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	123439705	123509742	chr6:123439705-123509742	0	+	123439705	123439705	8553170	4	72,115,101,297,	0,29110,49799,69740,
#Partially deleted in new
chr6	123439705	123470141	chr6:123439705-123470141	0	+	123439705	123439705	8553170	4	72,112,115,505,	0,22541,29110,29931,
#Partially deleted in new
chr6	123439708	123488921	chr6:123439708-123488921	0	+	123439708	123439708	8553170	3	69,115,192,	0,29107,49021,
#Partially deleted in new
chr6	123464249	123636909	chr6:123464249-123636909	1	-	123464882	123636775	789624	9	734,183,60,66,60,33,159,210,156,	0,39469,48053,51891,66256,83090,84204,106673,172504,
#Partially deleted in new
chr6	123498188	123516206	chr6:123498188-123516206	0	-	123498499	123516206	789624	4	457,183,60,66,	0,5530,14114,17952,
#Partially deleted in new
chr6	123503650	123637093	chr6:123503650-123637093	1	-	123503650	123636775	789624	8	251,60,66,60,33,159,210,340,	0,8652,12490,26855,43689,44803,67272,133103,
#Duplicated in new
chr6	123519696	123557670	chr6:123519696-123557670	3	+	123519696	123519696	8553170	7	59,61,234,94,97,165,150,	0,11909,13603,20508,33725,37549,37824,
#Partially deleted in new
chr6	123528680	123636972	chr6:123528680-123636972	1	-	123529273	123636775	789624	6	613,60,33,159,210,219,	0,1825,18659,19773,42242,108073,
#Deleted in new
chr6	123528713	123530565	chr6:123528713-123530565	0	-	123529355	123530565	789624	2	716,60,	0,1792,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	123589710	123685323	chr6:123589710-123685323	3	+	123589710	123589710	8553170	10	20,58,189,204,100,194,271,73,69,184,	0,660,20605,28616,65948,79149,89775,91731,92097,95429,
#Partially deleted in new
chr6	123804140	124658958	chr6:123804140-124658958	1	+	123804200	124658479	789624	4	114,138,81,773,	0,478864,551126,854045,
#Partially deleted in new
chr6	123804140	124825657	chr6:123804140-124825657	3	+	123804200	124823229	789624	7	114,138,81,201,61,82,2438,	0,478864,551126,854045,987198,1014246,1019079,
#Partially deleted in new
chr6	123804140	124391044	chr6:123804140-124391044	0	+	123804140	123804140	8553170	5	114,64,138,81,312,	0,317737,478864,551126,586592,
#Partially deleted in new
chr6	123823239	123829285	chr6:123823239-123829285	3	+	123823239	123823239	8553170	2	150,499,	0,5547,
#Partially deleted in new
chr6	124121849	124825616	chr6:124121849-124825616	1	+	124121890	124823229	789624	8	92,138,81,7,194,61,82,2397,	0,161155,233417,368536,536343,669489,696537,701370,
#Deleted in new
chr6	124283003	124283271	chr6:124283003-124283271	1	+	124283004	124283271	789624	2	139,9,	0,259,
#Partially deleted in new
chr6	124818398	124823623	chr6:124818398-124823623	0	+	124818398	124819110	789624	3	70,89,404,	0,687,4821,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	124909092	124963039	chr6:124909092-124963039	3	-	124909092	124909092	789624	7	3767,61,43,110,141,168,217,	0,11095,22603,25915,36206,38838,53730,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	124962544	125092633	chr6:124962544-125092633	3	+	124962544	125082937	789624	6	882,234,165,202,72,9770,	0,82666,95397,114112,118891,120319,
#Partially deleted in new
chr6	124962544	125086338	chr6:124962544-125086338	1	+	124963327	125082897	789624	7	882,234,165,202,72,115,3475,	0,82666,95397,114112,118891,119904,120319,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	124971254	125045411	chr6:124971254-125045411	0	+	124971254	124971254	8553170	2	344,201,	0,73956,
#Partially deleted in new
chr6	124983363	125083722	chr6:124983363-125083722	1	+	125076689	125082937	789624	7	158,81,234,165,202,72,859,	0,13211,61847,74578,93293,98072,99500,
#Partially deleted in new
chr6	124983363	125009282	chr6:124983363-125009282	0	+	125009276	125009282	8553170	4	158,81,102,109,	0,13211,22712,25810,
#Partially deleted in new
chr6	124983367	125083515	chr6:124983367-125083515	1	+	125009276	125082897	789624	9	154,81,109,234,165,202,72,115,652,	0,13207,25806,61843,74574,93289,98068,99081,99496,
#Deleted in new
chr6	125008754	125009489	chr6:125008754-125009489	0	+	125008754	125008754	8553170	2	168,316,	0,419,
#Partially deleted in new
chr6	125045302	125076858	chr6:125045302-125076858	0	+	125045302	125046660	789624	5	142,55,108,165,202,	0,1304,2849,12639,31354,
#Partially deleted in new
chr6	125046599	125082954	chr6:125046599-125082954	0	+	125046599	125046599	8553170	5	62,165,202,72,91,	0,11342,30057,34836,36264,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	125119048	125248360	chr6:125119048-125248360	0	+	125220145	125248360	789624	4	340,116,149,79,	0,101029,110069,129233,
#Partially deleted in new
chr6	125153648	125263497	chr6:125153648-125263497	1	+	125153951	125262962	789624	8	322,116,149,102,15,39,61,664,	0,66429,75469,94633,98373,100068,103449,109185,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	125153655	125264407	chr6:125153655-125264407	3	+	125153951	125262962	789624	7	315,116,149,102,39,61,1574,	0,66422,75462,94626,100061,103442,109178,
#Partially deleted in new
chr6	125153732	125263497	chr6:125153732-125263497	1	+	125153951	125262843	789624	6	238,116,149,102,39,664,	0,66345,75385,94549,99984,109101,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	125153764	125264407	chr6:125153764-125264407	1	+	125153951	125262843	789624	5	206,116,149,102,1574,	0,66313,75353,94517,109069,
#Partially deleted in new
chr6	125153792	125263226	chr6:125153792-125263226	1	+	125153951	125262962	789624	6	178,116,149,102,61,393,	0,66285,75325,94489,103305,109041,
#Partially deleted in new
chr6	125153848	125248475	chr6:125153848-125248475	0	+	125153848	125153848	8553170	4	122,116,149,194,	0,66229,75269,94433,
#Partially deleted in new
chr6	125153899	125263062	chr6:125153899-125263062	1	+	125153951	125257173	789624	7	71,116,149,102,39,83,229,	0,66178,75218,94382,99817,103198,108934,
#Partially deleted in new
chr6	125154188	125263044	chr6:125154188-125263044	1	+	125220145	125262962	789624	7	344,116,149,102,39,61,211,	0,65889,74929,94093,99528,102909,108645,
#Partially deleted in new
chr6	125154188	125253799	chr6:125154188-125253799	0	+	125154188	125154188	8553170	5	344,116,149,102,1778,	0,65889,74929,94093,97833,
#Partially deleted in new
chr6	125154380	125263125	chr6:125154380-125263125	1	+	125220145	125262843	789624	5	152,116,149,102,292,	0,65697,74737,93901,108453,
#Partially deleted in new
chr6	125203638	125263492	chr6:125203638-125263492	1	+	125220145	125262843	789624	5	139,116,149,102,659,	0,16439,25479,44643,59195,
#Partially deleted in new
chr6	125219844	125263148	chr6:125219844-125263148	1	+	125220145	125262843	789624	4	349,149,102,315,	0,9273,28437,42989,
#Partially deleted in new
chr6	125219961	125276217	chr6:125219961-125276217	0	-	125219961	125219961	8553170	5	191,139,68,171,55,	0,1883,14384,45220,56201,
#Partially deleted in new
chr6	125221927	125301958	chr6:125221927-125301958	0	-	125292899	125301932	0	6	56,68,139,69,122,110,	0,12418,55174,70913,78610,79921,
#Partially deleted in new
chr6	125229066	125263038	chr6:125229066-125263038	0	+	125229066	125229066	8553170	3	200,102,205,	0,19215,33767,
#Partially deleted in new
chr6	125231206	125263250	chr6:125231206-125263250	0	+	125231206	125231206	8553170	5	31,102,39,61,417,	0,17075,22510,25891,31627,
#Partially deleted in new
chr6	125259962	125263057	chr6:125259962-125263057	0	+	125259962	125259962	8553170	2	418,224,	0,2871,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	125261010	125263496	chr6:125261010-125263496	0	+	125261010	125261010	8553170	1	2486,	0,
#Partially deleted in new
chr6	125275349	125301974	chr6:125275349-125301974	0	-	125292899	125301932	0	5	894,139,69,122,126,	0,1752,17491,25188,26499,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	125275881	125301937	chr6:125275881-125301937	1	-	125298695	125301932	789624	5	362,139,167,122,89,	0,1220,22768,24656,25967,
#Partially deleted in new
chr6	125275885	125301975	chr6:125275885-125301975	3	-	125276145	125301932	0	6	358,139,69,103,122,127,	0,1216,16955,22828,24652,25963,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	125275885	125279414	chr6:125275885-125279414	0	-	125275885	125275885	8553170	1	3529,	0,
#Partially deleted in new
chr6	125276954	125301958	chr6:125276954-125301958	0	-	125276954	125276954	8553170	4	286,69,122,110,	0,15886,23583,24894,
#Partially deleted in new
chr6	125277078	125293231	chr6:125277078-125293231	0	-	125277078	125277078	8553170	2	162,391,	0,15762,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	125297486	125302078	chr6:125297486-125302078	1	-	125297554	125301932	789624	4	83,103,122,230,	0,1227,3051,4362,
#Deleted in new
chr6	125300276	125302072	chr6:125300276-125302072	0	-	125300276	125300276	8553170	2	383,224,	0,1572,
#Partially deleted in new
chr6	125370033	125445181	chr6:125370033-125445181	2	-	125370033	125370033	8553170	4	668,144,183,160,	0,3233,4105,74988,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	125370045	125445153	chr6:125370045-125445153	1	-	125370045	125370045	8553170	5	656,168,183,129,132,	0,3221,4093,38448,74976,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	125370045	125445131	chr6:125370045-125445131	0	-	125370045	125370045	8553170	5	656,144,183,157,110,	0,3221,4093,68034,74976,
#Partially deleted in new
chr6	125425626	125445183	chr6:125425626-125445183	0	-	125425626	125425626	8553170	3	50,69,162,	0,5507,19395,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	125578557	125745610	chr6:125578557-125745610	1	-	125578557	125578557	8553170	5	168,67,84,164,26,	0,67076,141866,166344,167027,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	125578566	125745028	chr6:125578566-125745028	0	-	125578566	125578566	8553170	5	159,67,38,84,127,	0,67067,78862,141857,166335,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	125578566	125749186	chr6:125578566-125749186	1	-	125578566	125578566	8553170	5	159,67,38,84,359,	0,67067,78862,141857,170261,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	125674352	125720218	chr6:125674352-125720218	3	+	125674352	125674352	789624	4	123,41,38,2761,	0,8024,9289,43105,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	125718235	125749190	chr6:125718235-125749190	3	-	125718235	125718235	8553170	2	2272,363,	0,30592,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	125720342	125749186	chr6:125720342-125749186	0	-	125720342	125720342	8553170	2	165,359,	0,28485,
#Partially deleted in new
chr6	125747663	125761269	chr6:125747663-125761269	1	+	125751855	125759802	789624	5	63,79,84,82,2153,	0,4137,4343,6801,11453,
#Partially deleted in new
chr6	125749579	125761269	chr6:125749579-125761269	3	+	125749776	125759802	789624	5	280,79,84,82,2153,	0,2221,2427,4885,9537,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr6	125781160	125931111	chr6:125781160-125931111	3	+	125815354	125928771	789624	17	211,77,114,221,80,108,114,126,185,1043,169,148,126,153,96,74,2476,	0,4976,34130,73859,93728,97102,99929,101265,103998,107778,109481,134172,139782,141521,146502,147013,147475,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr6	125790762	125932030	chr6:125790762-125932030	1	+	125815354	125928771	789624	16	305,114,221,80,108,114,126,185,1043,169,148,126,153,96,74,3395,	0,24528,64257,84126,87500,90327,91663,94396,98176,99879,124570,130180,131919,136900,137411,137873,
#Partially deleted in new
chr6	125790939	125881203	chr6:125790939-125881203	0	+	125815354	125881203	789624	6	128,114,221,80,108,114,	0,24351,64080,83949,87323,90150,
#Partially deleted in new
chr6	125790964	125929027	chr6:125790964-125929027	1	+	125874929	125928771	789624	15	103,114,80,108,114,126,185,1010,169,148,126,153,96,74,392,	0,24326,83924,87298,90125,91461,94194,98007,99677,124368,129978,131717,136698,137209,137671,
#Partially deleted in new
chr6	125797855	125818858	chr6:125797855-125818858	3	-	125797855	125797855	789624	3	310,142,49,	0,4447,20954,
#Partially deleted in new
chr6	125810134	125855240	chr6:125810134-125855240	0	+	125815354	125855240	789624	3	213,114,221,	0,5156,44885,
#Partially deleted in new
chr6	125815217	125874968	chr6:125815217-125874968	0	+	125815354	125874968	789624	3	187,221,80,	0,39802,59671,
#Partially deleted in new
chr6	125815217	125855590	chr6:125815217-125855590	0	+	125815217	125815217	8553170	2	187,571,	0,39802,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	125875167	125875498	chr6:125875167-125875498	3	+	125875167	125875167	8553170	1	331,	0,
#Partially deleted in new
chr6	125899908	125927758	chr6:125899908-125927758	0	+	125899908	125899908	8553170	5	113,148,126,153,96,	0,15424,21034,22773,27754,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	125919223	125931111	chr6:125919223-125931111	1	+	125919356	125928771	789624	6	208,126,153,96,74,2476,	0,1719,3458,8439,8950,9412,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	125919304	125931111	chr6:125919304-125931111	1	+	125919356	125928665	789624	5	127,126,153,96,2476,	0,1638,3377,8358,9331,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	125956780	125980244	chr6:125956780-125980244	3	+	125956977	125977676	789624	5	398,118,70,127,2601,	0,10106,15478,18066,20863,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	125979811	125979934	chr6:125979811-125979934	7	-	125979811	125979811	16724991	1	123,	0,
#Partially deleted in new
chr6	125986429	126038888	chr6:125986429-126038888	3	+	125986550	126038836	789624	13	193,66,74,82,93,135,157,81,165,82,132,121,184,	0,7327,9537,11623,11793,12120,13027,21962,24823,26341,26540,34730,52275,
#Partially deleted in new
chr6	125986478	126039276	chr6:125986478-126039276	1	+	125986550	126038836	789624	13	144,66,74,82,93,135,157,81,165,82,132,106,572,	0,7278,9488,11574,11744,12071,12978,21913,24774,26292,26491,34681,52226,
#Partially deleted in new
chr6	125986478	126008480	chr6:125986478-126008480	0	+	125986550	125998259	789624	7	144,66,74,93,135,157,89,	0,7278,9488,11744,12071,12978,21913,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr6	125986478	126039276	chr6:125986478-126039276	0	+	125986550	126008670	789624	15	144,66,74,82,93,135,157,81,89,100,165,82,132,121,572,	0,7278,9488,11574,11744,12071,12978,21913,22178,22856,24774,26292,26491,34681,52226,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr6	125986506	126203817	chr6:125986506-126203817	0	+	125986550	126006855	8553170	23	116,66,74,82,93,135,157,113,81,89,493,82,132,121,221,51,68,89,35,149,113,87,1790,	0,7250,9460,11546,11716,12043,12950,20335,21885,22150,24418,26264,26463,34653,52198,54288,66616,126359,128198,128838,129236,188318,215521,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	125986525	126011274	chr6:125986525-126011274	0	+	125986550	126006855	789624	11	97,66,74,82,93,135,157,113,81,89,22,	0,7231,9441,11527,11697,12024,12931,20316,21866,22131,24727,
#Partially deleted in new
chr6	125986550	125998134	chr6:125986550-125998134	0	+	125986550	125998134	789624	4	72,30,74,82,	0,7242,9416,11502,
#Partially deleted in new
chr6	125986552	125998630	chr6:125986552-125998630	0	+	125996017	125998630	789624	6	221,66,74,82,93,81,	0,7204,9414,11500,11670,11997,
#Partially deleted in new
chr6	125986552	125999525	chr6:125986552-125999525	0	+	125996017	125999525	789624	7	138,66,74,82,93,135,69,	0,7204,9414,11500,11670,11997,12904,
#Partially deleted in new
chr6	125986913	125998098	chr6:125986913-125998098	0	+	125986913	125986913	8553170	4	276,22,74,46,	0,6887,9053,11139,
#Partially deleted in new
chr6	126006841	126038753	chr6:126006841-126038753	0	+	126006841	126006855	789624	7	113,81,165,73,127,121,49,	0,1550,4411,5929,6133,14318,31863,
#Partially deleted in new
chr6	126177192	126202239	chr6:126177192-126202239	0	+	126177192	126177192	8553170	4	143,77,151,212,	0,21606,22557,24835,
#Deleted in new
chr6	126257920	126258355	chr6:126257920-126258355	7	-	126257920	126257920	16724991	1	435,	0,
#Partially deleted in new
chr6	126340173	126348608	chr6:126340173-126348608	1	+	126340273	126348492	789624	3	271,114,143,	0,6031,8292,
#Partially deleted in new
chr6	126340173	126348608	chr6:126340173-126348608	1	+	126340273	126348469	789624	3	226,74,143,	0,6071,8292,
#Partially deleted in new
chr6	126340173	126348875	chr6:126340173-126348875	3	+	126340273	126348492	789624	3	226,114,410,	0,6031,8292,
#Partially deleted in new
chr6	126484630	126484713	chr6:126484630-126484713	3	+	126484630	126484630	5263520	1	83,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	126590286	126590393	chr6:126590286-126590393	3	-	126590286	126590286	8553170	1	107,	0,
#Deleted in new
chr6	126602355	126603649	chr6:126602355-126603649	7	-	126602355	126602355	16724991	1	1294,	0,
#Deleted in new
chr6	126627483	126628570	chr6:126627483-126628570	7	-	126627483	126627483	16724991	1	1087,	0,
#Deleted in new
chr6	126643487	126644390	chr6:126643487-126644390	7	+	126643487	126643487	16724991	1	903,	0,
#Deleted in new
chr6	126643639	126644299	chr6:126643639-126644299	5	+	126643639	126643639	16724991	1	660,	0,
#Deleted in new
chr6	126683035	126683847	chr6:126683035-126683847	7	+	126683035	126683035	16724991	2	697,83,	0,729,
#Partially deleted in new
chr6	127118603	127197296	chr6:127118603-127197296	3	+	127119192	127196007	789624	5	686,192,147,198,1474,	0,30044,31822,36637,77219,
#Partially deleted in new
chr6	127119037	127197765	chr6:127119037-127197765	1	+	127119192	127197509	789624	6	252,192,147,198,161,340,	0,29610,31388,36203,76785,78388,
#Partially deleted in new
chr6	127119826	127155285	chr6:127119826-127155285	0	+	127119826	127119826	8553170	4	142,192,147,45,	0,28821,30599,35414,
#Partially deleted in new
chr6	127266609	127288558	chr6:127266609-127288558	3	+	127280338	127287693	0	3	316,110,1943,	0,13621,20006,
#Partially deleted in new
chr6	127266681	127288554	chr6:127266681-127288554	1	+	127280338	127287693	0	3	28,110,1939,	0,13549,19934,
#Partially deleted in new
chr6	127266725	127286891	chr6:127266725-127286891	1	+	127280338	127286170	789624	4	370,110,128,276,	0,13505,19324,19890,
#Partially deleted in new
chr6	127266737	127288554	chr6:127266737-127288554	1	+	127286616	127287693	0	5	358,110,89,128,1939,	0,13493,13778,19312,19878,
#Partially deleted in new
chr6	127266839	127286351	chr6:127266839-127286351	1	+	127282387	127286170	789624	4	86,110,109,302,	0,13391,15447,19210,
#Partially deleted in new
chr6	127266848	127288567	chr6:127266848-127288567	1	+	127280338	127286170	789624	4	77,110,128,1952,	0,13382,19201,19767,
#Partially deleted in new
chr6	127266850	127280748	chr6:127266850-127280748	0	+	127266850	127266850	8553170	2	75,518,	0,13380,
#Partially deleted in new
chr6	127266863	127286849	chr6:127266863-127286849	1	+	127282387	127286170	789624	5	181,110,109,128,234,	0,13367,15423,19186,19752,
#Partially deleted in new
chr6	127266871	127286084	chr6:127266871-127286084	0	+	127282387	127286084	789624	5	173,110,89,109,35,	0,13359,13644,15415,19178,
#Partially deleted in new
chr6	127266882	127286953	chr6:127266882-127286953	0	+	127266882	127266882	8553170	3	162,110,338,	0,13348,19733,
#Partially deleted in new
chr6	127266882	127286097	chr6:127266882-127286097	0	+	127266882	127266882	8553170	4	213,110,141,48,	0,13348,18325,19167,
#Partially deleted in new
chr6	127266882	127288362	chr6:127266882-127288362	1	+	127286616	127287693	0	5	43,110,141,128,1747,	0,13348,18325,19167,19733,
#Partially deleted in new
chr6	127266882	127288362	chr6:127266882-127288362	1	+	127280338	127287693	0	3	213,110,1747,	0,13348,19733,
#Partially deleted in new
chr6	127266882	127286643	chr6:127266882-127286643	0	+	127286616	127286643	789624	5	213,110,89,128,28,	0,13348,13633,19167,19733,
#Partially deleted in new
chr6	127266887	127286903	chr6:127266887-127286903	1	+	127282387	127286170	789624	5	208,110,109,128,288,	0,13343,15399,19162,19728,
#Partially deleted in new
chr6	127288709	127343609	chr6:127288709-127343609	3	-	127289868	127331028	789624	6	1568,81,53,143,222,274,	0,26106,27740,38292,42099,54626,
#Partially deleted in new
chr6	127288711	127342875	chr6:127288711-127342875	1	-	127289868	127342371	789624	6	1566,81,53,143,222,520,	0,26104,27738,38290,42097,53644,
#Partially deleted in new
chr6	127288719	127343346	chr6:127288719-127343346	1	-	127289868	127331028	789624	6	1558,81,53,143,222,386,	0,26096,27730,38282,42089,54241,
#Partially deleted in new
chr6	127288761	127331030	chr6:127288761-127331030	0	-	127314885	127331028	789624	4	1516,81,147,222,	0,26054,38236,42047,
#Partially deleted in new
chr6	127289266	127343562	chr6:127289266-127343562	1	-	127289868	127327139	789624	5	1011,81,53,143,227,	0,25549,27183,37735,54069,
#Partially deleted in new
chr6	127289266	127343549	chr6:127289266-127343549	1	-	127314821	127327139	789624	4	1011,81,143,214,	0,25549,37735,54069,
#Partially deleted in new
chr6	127289631	127343607	chr6:127289631-127343607	0	-	127314885	127331028	789624	6	646,81,4,143,222,272,	0,25184,25503,37370,41177,53704,
#Partially deleted in new
chr6	127289633	127343599	chr6:127289633-127343599	1	-	127314821	127331028	789624	5	644,81,143,222,264,	0,25182,37368,41175,53702,
#Partially deleted in new
chr6	127289779	127315860	chr6:127289779-127315860	0	-	127289779	127289779	8553170	2	498,1045,	0,25036,
#Partially deleted in new
chr6	127289868	127343398	chr6:127289868-127343398	1	-	127289868	127331028	789624	7	409,81,53,143,222,38,63,	0,24947,26581,37133,40940,41961,53467,
#Partially deleted in new
chr6	127289876	127343359	chr6:127289876-127343359	1	-	127314821	127331028	789624	6	401,81,143,222,38,24,	0,24939,37125,40932,41953,53459,
#Partially deleted in new
chr6	127289928	127327137	chr6:127289928-127327137	0	-	127316041	127327137	789624	5	349,81,148,53,136,	0,24887,26005,26521,37073,
#Partially deleted in new
chr6	127289987	127343359	chr6:127289987-127343359	0	-	127315970	127331028	789624	7	290,81,41,53,143,222,24,	0,24828,25946,26462,37014,40821,53348,
#Partially deleted in new
chr6	127290045	127294744	chr6:127290045-127294744	0	-	127290045	127290045	8553170	2	232,241,	0,4458,
#Partially deleted in new
chr6	127290049	127330949	chr6:127290049-127330949	0	-	127290049	127330949	789624	7	228,81,41,53,79,143,141,	0,24766,25884,26400,36446,36952,40759,
#Partially deleted in new
chr6	127290109	127327012	chr6:127290109-127327012	0	-	127290109	127327012	789624	4	168,81,41,11,	0,24706,25824,36892,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	127313065	127316459	chr6:127313065-127316459	0	-	127313578	127316459	789624	3	526,81,10,	0,1750,3384,
#Partially deleted in new
chr6	127314854	127343359	chr6:127314854-127343359	0	-	127314854	127331028	789624	7	42,53,79,143,222,38,24,	0,1595,11641,12147,15954,16975,28481,
#Partially deleted in new
chr6	127314858	127343348	chr6:127314858-127343348	0	-	127314858	127331028	789624	7	38,53,143,222,38,70,13,	0,1591,12143,15950,16971,26710,28477,
#Partially deleted in new
chr6	127314865	127343359	chr6:127314865-127343359	0	-	127329850	127331028	789624	6	31,53,143,61,222,24,	0,1584,12136,14956,15943,28470,
#Partially deleted in new
chr6	127316255	127330900	chr6:127316255-127330900	0	-	127316255	127316255	8553170	3	247,143,92,	0,10746,14553,
#Partially deleted in new
chr6	127316458	127342407	chr6:127316458-127342407	0	-	127316458	127331028	789624	5	44,143,222,70,52,	0,10543,14350,25110,25897,
#Deleted in new
chr6	127317882	127317973	chr6:127317882-127317973	7	-	127317882	127317882	16724991	1	91,	0,
#Partially deleted in new
chr6	127326880	127343358	chr6:127326880-127343358	0	-	127326880	127326880	8553170	3	264,222,23,	0,3928,16455,
#Partially deleted in new
chr6	127355755	127356789	chr6:127355755-127356789	7	+	127355755	127355755	16724991	2	531,177,	0,857,
#Partially deleted in new
chr6	127362512	127363403	chr6:127362512-127363403	7	+	127362512	127362512	16724991	1	891,	0,
#Deleted in new
chr6	127416534	127416952	chr6:127416534-127416952	7	-	127416534	127416534	16724991	1	418,	0,
#Deleted in new
chr6	127435635	127436189	chr6:127435635-127436189	7	+	127435635	127435635	16724991	1	554,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	127438405	127519001	chr6:127438405-127519001	3	-	127473280	127516614	8553170	12	5877,1333,80,363,255,312,1176,72,159,225,1189,423,	0,8002,11416,11584,15441,34674,36887,44507,74485,76417,77108,80173,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	127440342	127451216	chr6:127440342-127451216	0	-	127440342	127440342	8553170	4	3940,1333,80,1227,	0,6065,9479,9647,
#Deleted in new
chr6	127441047	127447085	chr6:127441047-127447085	0	-	127444229	127447085	789624	2	3235,214,	0,5824,
#Partially deleted in new
chr6	127443246	127459391	chr6:127443246-127459391	3	-	127444108	127453981	789624	6	1036,1333,80,363,255,217,	0,3161,6575,6743,10600,15928,
#Partially deleted in new
chr6	127444038	127476064	chr6:127444038-127476064	0	-	127473280	127476064	789624	7	244,1333,80,363,255,312,763,	0,2369,5783,5951,9808,29041,31263,
#Partially deleted in new
chr6	127447597	127459365	chr6:127447597-127459365	0	-	127447597	127453981	789624	6	143,80,363,36,255,191,	0,2224,2392,3684,6249,11577,
#Deleted in new
chr6	127450045	127454242	chr6:127450045-127454242	0	-	127450045	127450045	8553170	2	307,396,	0,3801,
#Partially deleted in new
chr6	127450186	127475473	chr6:127450186-127475473	0	-	127473280	127475473	789624	4	166,241,312,181,	0,3660,22893,25106,
#Partially deleted in new
chr6	127453869	127475694	chr6:127453869-127475694	0	-	127453869	127453869	8553170	3	232,138,402,	0,19210,21423,
#Partially deleted in new
chr6	127472793	127519191	chr6:127472793-127519191	3	-	127473280	127516614	789624	7	598,1176,72,159,225,1189,658,	0,2499,10119,40097,42029,42720,45740,
#Partially deleted in new
chr6	127472805	127518891	chr6:127472805-127518891	1	-	127473280	127516614	789624	7	586,1167,72,159,225,1189,358,	0,2496,10107,40085,42017,42708,45728,
#Deleted in new
chr6	127516583	127518920	chr6:127516583-127518920	0	-	127516583	127516614	789624	3	119,248,342,	0,935,1995,
#Partially deleted in new
chr6	127519454	127578707	chr6:127519454-127578707	0	+	127519454	127519454	8553170	5	117,87,50,76,22,	0,372,2559,51298,59231,
#Partially deleted in new
chr6	127577173	127591817	chr6:127577173-127591817	3	+	127577185	127591622	789624	6	313,87,185,101,239,275,	0,1512,3091,4008,12913,14369,
#Deleted in new
chr6	127632957	127635321	chr6:127632957-127635321	7	-	127632957	127632957	16724991	3	101,164,87,	0,1062,2277,
#Deleted in new
chr6	127654859	127655278	chr6:127654859-127655278	7	-	127654859	127654859	16724991	1	419,	0,
#Deleted in new
chr6	127659689	127660579	chr6:127659689-127660579	7	-	127659689	127659689	16724991	2	224,198,	0,692,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	127664553	127681555	chr6:127664553-127681555	3	+	127664553	127664553	8553170	4	79,119,202,225,	0,789,15798,16777,
#Partially deleted in new
chr6	127708071	127918540	chr6:127708071-127918540	3	-	127709984	127900932	789624	7	1945,136,1049,459,159,240,113,	0,11616,104811,121404,146958,192770,210356,
#Partially deleted in new
chr6	127708193	127901081	chr6:127708193-127901081	1	-	127709984	127900932	789624	6	1823,136,1049,459,159,240,	0,11494,104689,121282,146836,192648,
#Partially deleted in new
chr6	127708193	127918631	chr6:127708193-127918631	1	-	127709984	127855174	789624	6	1823,136,1049,459,159,204,	0,11494,104689,121282,146836,210234,
#Partially deleted in new
chr6	127708810	127918597	chr6:127708810-127918597	1	-	127709984	127855042	789624	6	1206,136,1049,459,159,170,	0,10877,104072,120665,146219,209617,
#Partially deleted in new
chr6	127813576	127900958	chr6:127813576-127900958	0	-	127813576	127900958	789624	3	355,159,117,	0,41453,87265,
#Deleted in new
chr6	127909832	127910052	chr6:127909832-127910052	7	+	127909832	127909832	16724991	1	220,	0,
#Partially deleted in new
chr6	127968778	128520674	chr6:127968778-128520674	3	-	127970226	128520358	0	30	1502,136,164,126,132,174,150,136,155,117,98,37,77,88,185,161,139,37,274,106,202,110,303,294,175,116,82,272,123,416,	0,4243,4885,7878,8144,12337,14052,14463,16942,21990,22515,23894,26683,28122,29941,36305,40351,95979,98740,110034,113658,114936,120911,215653,250143,271256,273742,353260,428787,551480,
#Partially deleted in new
chr6	127968976	128520583	chr6:127968976-128520583	1	-	127970226	128520358	0	31	1304,136,164,126,132,174,150,136,155,117,98,37,18,77,88,185,161,139,37,274,106,202,110,303,294,175,116,82,272,123,325,	0,4045,4687,7680,7946,12139,13854,14265,16744,21792,22317,23696,26272,26485,27924,29743,36107,40153,95781,98542,109836,113460,114738,120713,215455,249945,271058,273544,353062,428589,551282,
#Partially deleted in new
chr6	127968976	128520476	chr6:127968976-128520476	1	-	127970226	128520358	0	33	1304,136,164,126,132,174,150,136,155,117,98,37,18,77,88,185,12,36,161,139,37,274,106,202,110,303,294,175,116,82,272,123,218,	0,4045,4687,7680,7946,12139,13854,14265,16744,21792,22317,23696,26272,26485,27924,29743,32219,34220,36107,40153,95781,98542,109836,113460,114738,120713,215455,249945,271058,273544,353062,428589,551282,
#Partially deleted in new
chr6	127969836	128520616	chr6:127969836-128520616	1	-	127970226	128520358	789624	32	444,136,164,126,132,174,150,136,155,117,98,37,18,77,88,185,36,161,139,37,274,106,202,110,303,294,175,116,82,272,123,358,	0,3185,3827,6820,7086,11279,12994,13405,15884,20932,21457,22836,25412,25625,27064,28883,33360,35247,39293,94921,97682,108976,112600,113878,119853,214595,249085,270198,272684,352202,427729,550422,
#Partially deleted in new
chr6	127969895	128520358	chr6:127969895-128520358	1	-	127970226	128520358	0	30	385,136,164,126,132,174,150,136,155,117,98,37,77,88,185,161,136,37,274,106,202,110,303,294,175,116,82,272,123,100,	0,3126,3768,6761,7027,11220,12935,13346,15825,20873,21398,22777,25566,27005,28824,35188,39234,94862,97623,108917,112541,113819,119794,214536,249026,270139,272625,352143,427670,550363,
#Partially deleted in new
chr6	127970112	128520583	chr6:127970112-128520583	1	-	127970226	128520358	789624	34	168,136,164,126,132,174,150,136,155,117,98,37,18,77,88,185,12,36,161,30,139,37,274,106,202,110,303,294,175,116,82,272,123,325,	0,2909,3551,6544,6810,11003,12718,13129,15608,20656,21181,22560,25136,25349,26788,28607,31083,33084,34971,35913,39017,94645,97406,108700,112324,113602,119577,214319,248809,269922,272408,351926,427453,550146,
#Partially deleted in new
chr6	127985820	128064763	chr6:127985820-128064763	0	-	127985820	128064763	789624	12	55,117,98,37,77,88,185,36,161,30,139,6,	0,4948,5473,6852,9641,11080,12899,17376,19263,20205,23309,78937,
#Partially deleted in new
chr6	127990859	128008077	chr6:127990859-128008077	0	-	127990859	128008077	789624	11	26,98,37,77,88,185,12,36,161,30,32,	0,434,1813,4602,6041,7860,10336,12337,14224,15166,17186,
#Partially deleted in new
chr6	127999986	128520599	chr6:127999986-128520599	0	-	127999986	127999986	8553170	19	344,12,36,161,30,139,37,274,106,202,110,303,294,175,116,82,272,123,341,	0,1209,3210,5097,6039,9143,64771,67532,78826,82450,83728,89703,184445,218935,240048,242534,322052,397579,520272,
#Partially deleted in new
chr6	127999986	128397617	chr6:127999986-128397617	0	-	128242591	128397617	789624	18	344,12,36,161,30,42,139,37,274,106,202,110,303,294,175,116,82,52,	0,1209,3210,5097,6039,8059,9143,64771,67532,78826,82450,83728,89703,184445,218935,240048,242534,397579,
#Deleted in new
chr6	128004976	128009172	chr6:128004976-128009172	0	-	128004976	128004976	8553170	2	268,43,	0,4153,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	128027885	128085248	chr6:128027885-128085248	3	+	128027885	128027885	789624	5	38,120,110,139,345,	0,34816,39601,55785,57018,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	128062065	128067677	chr6:128062065-128067677	0	-	128062065	128062065	8553170	3	359,37,159,	0,2692,5453,
#Partially deleted in new
chr6	128063435	128520515	chr6:128063435-128520515	0	-	128063435	128063435	8553170	14	90,37,274,106,202,110,303,294,175,116,82,272,123,257,	0,1322,4083,15377,19001,20279,26254,120996,155486,176599,179085,258603,334130,456823,
#Partially deleted in new
chr6	128184431	128241299	chr6:128184431-128241299	0	-	128184431	128184431	8553170	4	294,175,116,77,	0,34490,55603,56791,
#Partially deleted in new
chr6	128184431	128322181	chr6:128184431-128322181	0	-	128184431	128322181	789624	3	294,175,143,	0,34490,137607,
#Partially deleted in new
chr6	128184572	128232151	chr6:128184572-128232151	0	-	128184572	128184572	8553170	4	153,175,134,62,	0,34349,46159,47517,
#Partially deleted in new
chr6	128219069	128491857	chr6:128219069-128491857	0	-	128219069	128219069	8553170	6	27,116,82,272,123,126,	0,20965,23451,102969,178496,272662,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	128235379	128322173	chr6:128235379-128322173	0	-	128235379	128235379	8553170	4	225,116,82,135,	0,4655,7141,86659,
#Partially deleted in new
chr6	128321040	128520587	chr6:128321040-128520587	1	-	128321786	128520358	789624	3	1270,123,329,	0,76525,199218,
#Partially deleted in new
chr6	128321402	128520565	chr6:128321402-128520565	0	-	128397672	128520358	789624	4	908,123,118,307,	0,76163,170329,198856,
#Partially deleted in new
chr6	128322250	128520599	chr6:128322250-128520599	0	-	128409312	128520358	789624	4	60,123,39,341,	0,75315,87043,198008,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	128500526	128501176	chr6:128500526-128501176	3	+	128500526	128500526	8553170	2	376,173,	0,477,
#Deleted in new
chr6	128518927	128520570	chr6:128518927-128520570	0	-	128518927	128518927	8553170	2	214,312,	0,1331,
#Deleted in new
chr6	128580112	128580884	chr6:128580112-128580884	7	-	128580112	128580112	16724991	1	772,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	128584389	128584491	chr6:128584389-128584491	3	+	128584389	128584389	8553170	1	102,	0,
#Partially deleted in new
chr6	128639187	128639653	chr6:128639187-128639653	7	-	128639187	128639187	16724991	1	466,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	128761716	128761808	chr6:128761716-128761808	3	-	128761716	128761716	8553170	1	92,	0,
#Partially deleted in new
chr6	128883140	129516563	chr6:128883140-129516563	1	+	128883245	129516347	789624	63	217,171,113,243,180,90,118,179,100,161,141,174,102,212,112,114,128,87,212,107,181,137,237,144,180,189,134,118,135,125,87,194,143,99,112,163,211,117,164,139,103,117,183,161,144,134,160,125,163,145,139,121,177,149,177,169,113,190,156,154,131,223,374,	0,166777,176643,215032,260760,263818,265838,271364,282435,294565,307064,309539,366971,368943,377570,383965,387483,396920,404706,408473,414544,417595,429720,431514,432335,432621,432897,437397,445137,459202,466157,470023,483078,486751,499981,508350,509904,518083,519183,520680,544611,555505,557675,562520,569847,571014,573194,577059,581149,582004,590073,595552,598122,603333,608760,609174,619518,619950,622059,624348,629222,631232,633049,
#Partially deleted in new
chr6	128883140	129516563	chr6:128883140-129516563	1	+	128883245	129516347	789624	64	217,171,113,243,180,90,118,179,100,161,141,174,102,212,112,114,128,87,212,107,181,137,237,144,180,189,134,118,135,125,87,194,143,99,112,163,211,117,164,139,103,117,183,158,144,134,160,125,163,145,139,12,121,177,149,177,169,113,190,156,154,131,223,374,	0,166777,176643,215032,260760,263818,265838,271364,282435,294565,307064,309539,366971,368943,377570,383965,387483,396920,404706,408473,414544,417595,429720,431514,432335,432621,432897,437397,445137,459202,466157,470023,483078,486751,499981,508350,509904,518083,519183,520680,544611,555505,557675,562523,569847,571014,573194,577059,581149,582004,590073,592249,595552,598122,603333,608760,609174,619518,619950,622059,624348,629222,631232,633049,
#Partially deleted in new
chr6	128883196	129516569	chr6:128883196-129516569	3	+	128883245	129516347	0	65	161,171,113,243,180,90,118,179,100,161,141,174,102,212,112,114,128,87,212,107,181,137,237,144,180,189,134,118,135,125,87,194,143,99,112,163,211,117,164,139,103,117,183,6,155,144,134,160,125,163,145,139,12,121,177,149,177,169,113,190,156,154,131,223,380,	0,166721,176587,214976,260704,263762,265782,271308,282379,294509,307008,309483,366915,368887,377514,383909,387427,396864,404650,408417,414488,417539,429664,431458,432279,432565,432841,437341,445081,459146,466101,469967,483022,486695,499925,508294,509848,518027,519127,520624,544555,555449,557619,559866,562470,569791,570958,573138,577003,581093,581948,590017,592193,595496,598066,603277,608704,609118,619462,619894,622003,624292,629166,631176,632993,
#Partially deleted in new
chr6	128883314	129049981	chr6:128883314-129049981	0	+	128883314	128883314	8553170	3	43,181,64,	0,22085,166603,
#Deleted in new
chr6	128928994	128929988	chr6:128928994-128929988	7	-	128928994	128928994	16724991	1	994,	0,
#Deleted in new
chr6	129157522	129159120	chr6:129157522-129159120	7	-	129157522	129157522	16724991	1	1598,	0,
#Partially deleted in new
chr6	129291613	129297865	chr6:129291613-129297865	0	+	129291613	129297865	789624	3	107,264,181,	0,1189,6071,
#Deleted in new
chr6	129436874	129436980	chr6:129436874-129436980	3	-	129436874	129436874	8553170	1	106,	0,
#Deleted in new
chr6	129479614	129481410	chr6:129479614-129481410	3	-	129479614	129479614	8553170	2	241,150,	0,1646,
#Partially deleted in new
chr6	129490682	129502672	chr6:129490682-129502672	0	+	129490682	129490682	8553170	5	113,98,177,169,14,	0,299,1218,1632,11976,
#Partially deleted in new
chr6	129490735	129492450	chr6:129490735-129492450	0	+	129490735	129490735	8553170	3	60,177,136,	0,1165,1579,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	129526625	129552587	chr6:129526625-129552587	3	-	129526625	129526625	8553170	7	160,74,54,200,96,98,46,	0,2039,6290,12550,13821,19769,25916,
#Partially deleted in new
chr6	129539347	129546628	chr6:129539347-129546628	0	-	129539347	129539347	8553170	3	28,96,234,	0,1099,7047,
#Partially deleted in new
chr6	129576131	129710225	chr6:129576131-129710225	3	-	129578512	129710136	789624	15	2473,62,125,141,207,83,160,78,92,166,170,64,236,203,202,	0,3938,7856,23084,24510,29745,31761,35401,40080,42555,53221,57910,62262,65684,133892,
#Partially deleted in new
chr6	129578418	129598961	chr6:129578418-129598961	0	-	129578418	129578418	8553170	4	186,62,125,91,	0,1651,5569,20452,
#Partially deleted in new
chr6	129578418	129596875	chr6:129578418-129596875	0	-	129578418	129578418	8553170	4	186,62,125,87,	0,1651,5569,18370,
#Partially deleted in new
chr6	129756297	129757112	chr6:129756297-129757112	7	-	129756297	129756297	16724991	1	815,	0,
#Deleted in new
chr6	129783768	129784045	chr6:129783768-129784045	7	-	129783768	129783768	16724991	1	277,	0,
#Deleted in new
chr6	129800907	129802214	chr6:129800907-129802214	7	+	129800907	129800907	16724991	2	716,579,	0,728,
#Deleted in new
chr6	129819636	129820170	chr6:129819636-129820170	7	-	129819636	129819636	16724991	1	534,	0,
#Partially deleted in new
chr6	129831243	129861271	chr6:129831243-129861271	3	-	129831318	129861188	789624	5	143,126,74,86,116,	0,2216,12286,14523,29912,
#Partially deleted in new
chr6	129831321	129861547	chr6:129831321-129861547	1	-	129831321	129861188	789624	6	65,126,74,86,89,125,	0,2138,12208,14445,29834,30101,
#Partially deleted in new
chr6	130013698	130141449	chr6:130013698-130141449	3	+	130042699	130139753	0	25	22,67,296,79,117,112,75,160,133,85,92,105,136,92,152,77,86,111,115,103,150,80,170,63,1840,	0,2527,4670,8528,28986,35583,36057,37550,39160,41472,43707,46337,52654,54631,57277,64859,69921,72441,79046,80566,90727,107180,119753,120144,125911,
#Partially deleted in new
chr6	130018582	130141451	chr6:130018582-130141451	1	+	130042699	130139753	0	23	82,79,117,112,75,160,133,85,92,105,136,92,152,77,86,111,115,103,150,80,170,63,1842,	0,3644,24102,30699,31173,32666,34276,36588,38823,41453,47770,49747,52393,59975,65037,67557,74162,75682,85843,102296,114869,115260,121027,
#Partially deleted in new
chr6	130018582	130051343	chr6:130018582-130051343	0	+	130042699	130051343	789624	6	82,79,117,112,180,95,	0,3644,24102,30699,31068,32666,
#Partially deleted in new
chr6	130018588	130140480	chr6:130018588-130140480	1	+	130042699	130139753	0	22	76,79,117,112,160,133,85,92,105,136,92,152,77,86,111,115,103,150,80,170,63,871,	0,3638,24096,30693,32660,34270,36582,38817,41447,47764,49741,52387,59969,65031,67551,74156,75676,85837,102290,114863,115254,121021,
#Partially deleted in new
chr6	130019366	130052980	chr6:130019366-130052980	0	+	130042699	130052980	789624	7	97,79,117,112,75,160,122,	0,2860,23318,29915,30389,31882,33492,
#Partially deleted in new
chr6	130020490	130141440	chr6:130020490-130141440	1	+	130042699	130139753	0	21	178,117,112,160,133,85,92,105,136,92,152,77,86,111,115,103,150,80,170,63,1831,	0,22194,28791,30758,32368,34680,36915,39545,45862,47839,50485,58067,63129,65649,72254,73774,83935,100388,112961,113352,119119,
#Partially deleted in new
chr6	130020519	130140485	chr6:130020519-130140485	1	+	130042699	130139753	0	22	149,79,117,112,160,133,85,92,105,136,92,152,77,86,111,115,103,150,80,170,63,876,	0,1707,22165,28762,30729,32339,34651,36886,39516,45833,47810,50456,58038,63100,65620,72225,73745,83906,100359,112932,113323,119090,
#Partially deleted in new
chr6	130020556	130141439	chr6:130020556-130141439	1	+	130042699	130139753	0	23	112,79,117,112,75,160,133,85,92,105,136,92,152,77,86,111,115,103,150,80,170,63,1830,	0,1670,22128,28725,29199,30692,32302,34614,36849,39479,45796,47773,50419,58001,63063,65583,72188,73708,83869,100322,112895,113286,119053,
#Partially deleted in new
chr6	130055086	130068371	chr6:130055086-130068371	0	+	130055086	130055086	8553170	5	169,92,105,136,42,	0,2319,4949,11266,13243,
#Partially deleted in new
chr6	130070846	130092761	chr6:130070846-130092761	0	+	130070846	130070846	8553170	5	281,77,86,111,17,	0,7711,12773,15293,21898,
#Partially deleted in new
chr6	130133409	130143203	chr6:130133409-130143203	3	-	130133409	130133409	8553170	2	310,520,	0,9274,
#Partially deleted in new
chr6	130133511	130138196	chr6:130133511-130138196	0	-	130133511	130133511	8553170	2	208,561,	0,4124,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	130133516	130138466	chr6:130133516-130138466	0	-	130133516	130133516	8553170	2	203,522,	0,4428,
#Partially deleted in new
chr6	130133565	130144370	chr6:130133565-130144370	0	-	130133565	130133565	8553170	4	154,62,107,621,	0,9186,9444,10184,
#Partially deleted in new
chr6	130133565	130145422	chr6:130133565-130145422	0	-	130133565	130133565	8553170	5	154,130,302,371,83,	0,9118,10184,10868,11774,
#Partially deleted in new
chr6	130133565	130146179	chr6:130133565-130146179	0	-	130133565	130133565	8553170	5	154,130,371,83,170,	0,9118,10868,11774,12444,
#Partially deleted in new
chr6	130144314	130365425	chr6:130144314-130365425	3	-	130144519	130215273	789624	14	490,83,172,201,168,85,186,114,190,100,46,120,116,306,	0,1025,1695,10510,31526,39788,40123,65180,70022,70880,72256,78379,168663,220805,
#Partially deleted in new
chr6	130144317	130222954	chr6:130144317-130222954	1	-	130144519	130215273	789624	12	487,83,172,201,168,85,186,114,190,100,46,261,	0,1022,1692,10507,31523,39785,40120,65177,70019,70877,72253,78376,
#Partially deleted in new
chr6	130144317	130215887	chr6:130144317-130215887	1	-	130144519	130215847	789624	11	487,83,172,201,168,85,186,114,190,100,91,	0,1022,1692,10507,31523,39785,40120,65177,70019,70877,71479,
#Partially deleted in new
chr6	130144683	130154853	chr6:130144683-130154853	0	-	130144772	130154853	789624	3	121,172,29,	0,1326,10141,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	130159531	130215642	chr6:130159531-130215642	1	-	130162263	130215273	789624	8	2744,168,85,186,108,190,100,109,	0,16309,24571,24906,49963,54805,55663,56002,
#Partially deleted in new
chr6	130175757	130209533	chr6:130175757-130209533	0	-	130175757	130175757	8553170	4	251,85,183,39,	0,8345,8680,33737,
#Partially deleted in new
chr6	130175834	130184632	chr6:130175834-130184632	0	-	130175834	130175834	8553170	3	174,85,195,	0,8268,8603,
#Partially deleted in new
chr6	130175903	130215858	chr6:130175903-130215858	0	-	130175903	130175903	8553170	7	105,92,85,186,114,190,664,	0,191,8199,8534,33591,38433,39291,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	130182987	130215290	chr6:130182987-130215290	1	-	130183297	130215273	789624	6	322,85,186,114,190,96,	0,1115,1450,26507,31349,32207,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	130183225	130215290	chr6:130183225-130215290	0	-	130214489	130215273	789624	6	260,85,186,114,188,96,	0,877,1212,26269,31111,31969,
#Partially deleted in new
chr6	130184122	130215910	chr6:130184122-130215910	0	-	130184122	130215273	789624	6	65,183,114,190,100,27,	0,315,25372,30214,31072,31761,
#Partially deleted in new
chr6	130184486	130215934	chr6:130184486-130215934	0	-	130184486	130215273	789624	5	137,114,190,100,51,	0,25008,29850,30708,31397,
#Partially deleted in new
chr6	130184500	130215910	chr6:130184500-130215910	0	-	130184500	130215273	789624	5	120,114,184,100,27,	0,24994,29836,30694,31383,
#Partially deleted in new
chr6	130365733	130443063	chr6:130365733-130443063	3	+	130440422	130441898	789624	3	791,64,2657,	0,19439,74673,
#Partially deleted in new
chr6	130366280	130443061	chr6:130366280-130443061	1	+	130440422	130441898	789624	2	244,2655,	0,74126,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	130421095	130443061	chr6:130421095-130443061	1	+	130440422	130441898	789624	2	263,2655,	0,19311,
#Partially deleted in new
chr6	130437116	130443061	chr6:130437116-130443061	1	+	130440422	130441898	789624	2	2362,2655,	0,3290,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	130573995	130574112	chr6:130573995-130574112	3	-	130573995	130573995	8553170	1	117,	0,
#Deleted in new
chr6	130697311	130697778	chr6:130697311-130697778	3	+	130697311	130697311	8553170	2	73,261,	0,206,
#Partially deleted in new
chr6	130827405	130837135	chr6:130827405-130837135	3	+	130827413	130834955	789624	2	246,2266,	0,7464,
#Partially deleted in new
chr6	130839346	131063322	chr6:130839346-131063322	3	-	130858135	130956485	789624	20	1252,113,81,99,123,564,147,63,173,173,98,153,88,219,76,43,105,213,506,168,	0,18784,24291,26189,28112,30216,38757,40797,45749,50947,54997,55620,60144,61615,65118,69474,87258,115758,116647,223808,
#Partially deleted in new
chr6	130839346	131063303	chr6:130839346-131063303	1	-	130858135	130956485	789624	17	1252,113,81,99,123,173,173,98,153,88,219,76,43,105,213,506,162,	0,18784,24291,26189,28112,45749,50947,54997,55620,60144,61615,65118,69474,87258,115758,116647,223795,
#Partially deleted in new
chr6	130839346	130868907	chr6:130839346-130868907	0	-	130839346	130839346	8553170	5	1252,113,81,99,1449,	0,18784,24291,26189,28112,
#Partially deleted in new
chr6	130839346	131000767	chr6:130839346-131000767	1	-	130858135	130956485	789624	17	1252,113,81,99,123,173,173,98,153,88,219,76,43,105,213,506,148,	0,18784,24291,26189,28112,45749,50947,54997,55620,60144,61615,65118,69474,87258,115758,116647,161273,
#Partially deleted in new
chr6	130839346	131063225	chr6:130839346-131063225	1	-	130858135	130956485	789624	18	1252,113,81,99,123,315,173,173,98,153,88,219,76,43,105,213,506,84,	0,18784,24291,26189,28112,30465,45749,50947,54997,55620,60144,61615,65118,69474,87258,115758,116647,223795,
#Partially deleted in new
chr6	130839346	130881882	chr6:130839346-130881882	1	-	130858135	130880483	789624	7	1252,113,81,99,63,36,1282,	0,18784,24291,26189,40797,41107,41254,
#Partially deleted in new
chr6	130839346	131063322	chr6:130839346-131063322	1	-	130858135	130956485	789624	18	1252,113,81,99,123,564,173,173,98,153,88,219,76,43,105,213,506,168,	0,18784,24291,26189,28112,30216,45749,50947,54997,55620,60144,61615,65118,69474,87258,115758,116647,223808,
#Partially deleted in new
chr6	130839349	131063233	chr6:130839349-131063233	1	-	130858135	130956485	789624	15	1249,113,81,173,173,98,153,88,219,76,43,105,213,506,79,	0,18781,24288,45746,50944,54994,55617,60141,61612,65115,69471,87255,115755,116644,223805,
#Partially deleted in new
chr6	130839349	130883094	chr6:130839349-130883094	1	-	130858135	130880483	789624	9	1249,113,81,123,54,147,63,36,2494,	0,18781,24288,28109,30978,38754,40794,41104,41251,
#Partially deleted in new
chr6	130839351	131063318	chr6:130839351-131063318	1	-	130858135	130956485	789624	20	1247,108,81,99,123,564,147,63,173,173,98,153,88,219,76,43,105,213,506,177,	0,18784,24286,26184,28107,30211,38752,40792,45744,50942,54992,55615,60139,61610,65113,69469,87253,115753,116642,223790,
#Partially deleted in new
chr6	130839352	131063258	chr6:130839352-131063258	1	-	130858135	130956485	789624	18	1242,113,81,99,123,564,173,173,98,153,88,219,76,43,105,213,506,117,	0,18778,24285,26183,28106,30210,45743,50941,54991,55614,60138,61609,65112,69468,87252,115752,116641,223789,
#Partially deleted in new
chr6	130840134	130882063	chr6:130840134-130882063	1	-	130858135	130880483	789624	9	464,113,81,99,123,564,147,36,1463,	0,17996,23503,25401,27324,29428,37969,40319,40466,
#Partially deleted in new
chr6	130840181	131063251	chr6:130840181-131063251	1	-	130858135	130956485	789624	15	417,113,81,173,173,98,153,88,219,76,43,105,213,506,110,	0,17949,23456,44914,50112,54162,54785,59309,60780,64283,68639,86423,114923,115812,222960,
#Partially deleted in new
chr6	130840372	130858328	chr6:130840372-130858328	0	-	130840372	130840372	8553170	2	226,198,	0,17758,
#Partially deleted in new
chr6	130840375	130865833	chr6:130840375-130865833	0	-	130840375	130840375	8553170	4	223,113,81,298,	0,17755,23262,25160,
#Partially deleted in new
chr6	130858135	130956485	chr6:130858135-130956485	1	-	130858135	130956485	789624	14	108,81,99,173,173,98,153,88,219,76,43,105,213,492,	0,5502,7400,26960,32158,36208,36831,41355,42826,46329,50685,68469,96969,97858,
#Partially deleted in new
chr6	130858135	130956485	chr6:130858135-130956485	1	-	130858135	130956485	789624	15	108,81,99,315,173,173,98,153,88,219,76,43,105,213,492,	0,5502,7400,11676,26960,32158,36208,36831,41355,42826,46329,50685,68469,96969,97858,
#Partially deleted in new
chr6	130858135	130970483	chr6:130858135-130970483	1	-	130858135	130956485	789624	17	108,81,99,123,564,173,173,98,153,88,219,76,43,105,213,506,201,	0,5502,7400,9323,11427,26960,32158,36208,36831,41355,42826,46329,50685,68469,96969,97858,112147,
#Partially deleted in new
chr6	130858224	130880489	chr6:130858224-130880489	0	-	130858224	130880483	789624	8	19,81,99,123,54,168,147,36,	0,5413,7311,9234,12103,14146,19879,22229,
#Partially deleted in new
chr6	130869562	130880752	chr6:130869562-130880752	0	-	130869562	130880483	789624	5	564,147,63,36,152,	0,8541,10581,10891,11038,
#Partially deleted in new
chr6	130869658	130890424	chr6:130869658-130890424	0	-	130869658	130890424	789624	7	468,54,102,147,63,173,131,	0,669,7015,8445,10485,15437,20635,
#Partially deleted in new
chr6	130869851	130880901	chr6:130869851-130880901	0	-	130869851	130880483	789624	6	275,54,168,147,36,301,	0,476,2519,8252,10602,10749,
#Partially deleted in new
chr6	130869851	130878214	chr6:130869851-130878214	0	-	130869851	130869851	8553170	5	93,88,54,168,111,	0,187,476,2519,8252,
#Partially deleted in new
chr6	130870076	130878625	chr6:130870076-130878625	0	-	130870076	130870076	8553170	2	50,522,	0,8027,
#Partially deleted in new
chr6	130881581	130956461	chr6:130881581-130956461	0	-	130882501	130956461	789624	12	1586,173,173,98,153,88,219,76,43,105,213,468,	0,3514,8712,12762,13385,17909,19380,22883,27239,45023,73523,74412,
#Partially deleted in new
chr6	130899493	130970418	chr6:130899493-130970418	0	-	130899493	130899493	8553170	6	85,219,76,43,105,136,	0,1468,4971,9327,27111,70789,
#Partially deleted in new
chr6	130899552	131063245	chr6:130899552-131063245	0	-	130899552	130899552	8553170	6	26,219,76,43,105,91,	0,1409,4912,9268,27052,163602,
#Partially deleted in new
chr6	130899574	131063243	chr6:130899574-131063243	0	-	130899574	130899574	8553170	6	4,219,76,43,105,102,	0,1387,4890,9246,27030,163567,
#Partially deleted in new
chr6	130955272	131013595	chr6:130955272-131013595	0	-	130955272	130956485	789624	3	45,506,34,	0,721,58289,
#Partially deleted in new
chr6	130955997	131014191	chr6:130955997-131014191	0	-	130955997	130956485	789624	2	502,89,	0,58105,
#Partially deleted in new
chr6	130956024	131015842	chr6:130956024-131015842	0	-	130956024	130956485	789624	3	475,53,24,	0,59256,59794,
#Partially deleted in new
chr6	130956103	130978796	chr6:130956103-130978796	0	-	130956103	130956485	789624	2	396,192,	0,22501,
#Partially deleted in new
chr6	130956131	131062576	chr6:130956131-131062576	0	-	130956131	130956485	789624	2	368,197,	0,106248,
#Partially deleted in new
chr6	131135665	131283535	chr6:131135665-131283535	3	+	131135763	131281726	0	8	117,132,140,137,161,113,148,2006,	0,9619,24393,29415,33447,63795,83995,145864,
#Partially deleted in new
chr6	131135736	131283532	chr6:131135736-131283532	1	+	131135763	131282604	789624	8	46,129,140,137,161,113,148,1134,	0,9551,24322,29344,33376,63724,83924,146662,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	131137377	131184558	chr6:131137377-131184558	0	+	131137377	131137377	8553170	5	374,132,140,69,186,	0,7907,22681,27703,46995,
#Partially deleted in new
chr6	131160174	131219750	chr6:131160174-131219750	0	+	131160174	131160174	8553170	4	24,137,161,90,	0,4906,8938,59486,
#Partially deleted in new
chr6	131164335	131282844	chr6:131164335-131282844	0	+	131164335	131164335	8553170	5	197,137,113,148,446,	0,745,35125,55325,118063,
#Deleted in new
chr6	131184324	131185486	chr6:131184324-131185486	7	-	131184324	131184324	16724991	1	1162,	0,
#Partially deleted in new
chr6	131199990	131283184	chr6:131199990-131283184	1	+	131219750	131282604	789624	3	72,148,786,	0,19670,82408,
#Partially deleted in new
chr6	131200826	131283535	chr6:131200826-131283535	1	+	131219750	131281726	789624	3	84,148,2006,	0,18834,80703,
#Partially deleted in new
chr6	131250158	131283532	chr6:131250158-131283532	1	+	131250567	131281726	789624	2	458,2003,	0,31371,
#Partially deleted in new
chr6	131250429	131281943	chr6:131250429-131281943	1	+	131250567	131281726	789624	3	187,69,414,	0,2607,31100,
#Deleted in new
chr6	131469058	131469536	chr6:131469058-131469536	7	+	131469058	131469058	16724991	1	478,	0,
#Partially deleted in new
chr6	131573143	131584332	chr6:131573143-131584332	3	+	131573282	131583908	0	8	196,73,175,160,95,105,137,591,	0,3519,5967,8075,9477,9916,10211,10598,
#Partially deleted in new
chr6	131573193	131579442	chr6:131573193-131579442	0	+	131573193	131573193	8553170	2	146,332,	0,5917,
#Partially deleted in new
chr6	131573224	131584325	chr6:131573224-131584325	1	+	131573282	131583908	0	8	115,73,199,160,95,105,137,584,	0,3438,5862,7994,9396,9835,10130,10517,
#Partially deleted in new
chr6	131573225	131583398	chr6:131573225-131583398	0	+	131573225	131573225	8553170	6	114,175,160,95,105,44,	0,5885,7993,9395,9834,10129,
#Partially deleted in new
chr6	131573241	131579665	chr6:131573241-131579665	0	+	131573241	131573241	8553170	3	98,73,555,	0,3421,5869,
#Partially deleted in new
chr6	131573282	131583905	chr6:131573282-131583905	1	+	131573282	131583905	0	7	57,73,175,160,95,44,104,	0,3380,5828,7936,9338,9777,10519,
#Partially deleted in new
chr6	131573965	131628205	chr6:131573965-131628205	1	-	131574292	131628049	789624	31	330,138,132,121,215,73,166,237,217,171,181,206,125,164,175,143,246,146,144,201,18,96,113,70,102,99,112,125,88,32,195,	0,13743,15499,16356,17347,18422,19040,20133,21981,22552,24321,24590,26072,28252,29064,30212,31274,32513,33962,36080,41358,41941,44441,45861,46662,47915,49385,50899,53430,53675,54045,
#Partially deleted in new
chr6	131576633	131579418	chr6:131576633-131579418	0	+	131576633	131576633	8553170	2	102,308,	0,2477,
#Partially deleted in new
chr6	131586732	131628229	chr6:131586732-131628229	3	-	131587678	131628049	789624	29	1114,132,121,215,73,166,237,217,171,181,206,125,164,175,143,246,146,144,201,96,113,70,102,99,112,125,88,32,219,	0,2732,3589,4580,5655,6273,7366,9214,9785,11554,11823,13305,15485,16297,17445,18507,19746,21195,23313,29174,31674,33094,33895,35148,36618,38132,40663,40908,41278,
#Partially deleted in new
chr6	131586737	131596521	chr6:131586737-131596521	0	-	131586737	131586737	8553170	7	1109,132,121,215,784,237,575,	0,2727,3584,4575,5650,7361,9209,
#Partially deleted in new
chr6	131586748	131628229	chr6:131586748-131628229	1	-	131586919	131628049	789624	30	189,138,132,121,215,73,166,237,217,171,181,206,125,164,175,143,246,146,144,201,96,113,70,102,99,112,125,88,32,219,	0,960,2716,3573,4564,5639,6257,7350,9198,9769,11538,11807,13289,15469,16281,17429,18491,19730,21179,23297,29158,31658,33078,33879,35132,36602,38116,40647,40892,41262,
#Partially deleted in new
chr6	131587244	131628066	chr6:131587244-131628066	1	-	131587678	131628049	789624	30	598,136,121,215,73,166,237,217,171,181,206,125,164,175,143,246,146,144,201,18,96,113,70,102,99,112,125,88,32,56,	0,2216,3077,4068,5143,5761,6854,8702,9273,11042,11311,12793,14973,15785,16933,17995,19234,20683,22801,28079,28662,31162,32582,33383,34636,36106,37620,40151,40396,40766,
#Partially deleted in new
chr6	131590409	131591984	chr6:131590409-131591984	0	-	131590409	131590409	8553170	2	33,672,	0,903,
#Partially deleted in new
chr6	131598250	131628199	chr6:131598250-131628199	1	-	131598250	131628049	789624	21	217,206,125,164,175,143,246,146,144,201,18,96,113,70,102,99,112,125,88,32,189,	0,305,1787,3967,4779,5927,6989,8228,9677,11795,17073,17656,20156,21576,22377,23630,25100,26614,29145,29390,29760,
#Partially deleted in new
chr6	131602298	131628060	chr6:131602298-131628060	1	-	131603143	131628049	789624	15	83,175,146,144,201,96,113,70,102,99,112,125,88,32,50,	0,731,4180,5629,7747,13608,16108,17528,18329,19582,21052,22566,25097,25342,25712,
#Deleted in new
chr6	131626960	131628200	chr6:131626960-131628200	0	-	131626960	131626960	8553170	3	523,32,190,	0,680,1050,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	131628441	131676797	chr6:131628441-131676797	0	+	131637384	131638534	789624	12	197,228,126,76,123,126,61,98,80,249,110,62,	0,8793,10009,13013,21585,24100,24389,29881,42806,45720,46638,48294,
#Partially deleted in new
chr6	131628460	131747418	chr6:131628460-131747418	3	+	131637384	131746956	0	26	178,228,76,123,126,61,98,80,120,110,66,73,109,132,32,128,67,88,179,52,155,136,78,133,157,633,	0,8774,12994,21566,24081,24370,29862,42787,45701,46619,48275,49407,54593,56903,57415,65036,90211,91831,93766,95579,97585,105127,108894,109570,111763,118325,
#Partially deleted in new
chr6	131637301	131747407	chr6:131637301-131747407	1	+	131637384	131746956	0	25	161,76,123,126,61,98,80,120,110,66,73,109,132,32,128,67,88,179,52,155,136,78,133,157,622,	0,4153,12725,15240,15529,21021,33946,36860,37778,39434,40566,45752,48062,48574,56195,81370,82990,84925,86738,88744,96286,100053,100729,102922,109484,
#Partially deleted in new
chr6	131637301	131747407	chr6:131637301-131747407	1	+	131637384	131737393	789624	24	161,76,123,126,61,98,80,120,110,66,73,109,132,32,128,67,88,179,52,155,78,133,157,622,	0,4153,12725,15240,15529,21021,33946,36860,37778,39434,40566,45752,48062,48574,56195,81370,82990,84925,86738,88744,100053,100729,102922,109484,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	131637303	131652651	chr6:131637303-131652651	0	+	131637384	131638530	789624	5	159,130,76,123,110,	0,1143,4151,12723,15238,
#Partially deleted in new
chr6	131641454	131674208	chr6:131641454-131674208	0	+	131641454	131641454	8553170	6	76,123,126,98,80,47,	0,8572,11087,16868,29793,32707,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	131642817	131642966	chr6:131642817-131642966	3	-	131642817	131642817	8553170	1	149,	0,
#Partially deleted in new
chr6	131652856	131675378	chr6:131652856-131675378	0	+	131652856	131652856	8553170	5	35,98,80,120,299,	0,5466,18391,21305,22223,
#Deleted in new
chr6	131699643	131701401	chr6:131699643-131701401	3	-	131700468	131701401	789624	1	1758,	0,
#Deleted in new
chr6	131708683	131711017	chr6:131708683-131711017	3	-	131708683	131711017	789624	1	2334,	0,
#Deleted in new
chr6	131780720	131781312	chr6:131780720-131781312	7	-	131780720	131780720	16724991	1	592,	0,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr6	131808015	131895155	chr6:131808015-131895155	3	+	131808035	131890511	0	25	260,73,117,126,61,98,80,120,110,66,73,109,132,32,128,70,88,170,52,155,130,81,133,163,4815,	0,39760,41974,43126,44159,46910,50652,52371,53579,56490,56850,60002,61342,64054,64907,66252,67760,68976,70526,71864,74329,75678,76915,78546,82325,
#Partially deleted in new
chr6	131808015	131851423	chr6:131808015-131851423	0	+	131808015	131808015	8553170	4	260,73,117,282,	0,39760,41974,43126,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr6	131808019	131895155	chr6:131808019-131895155	1	+	131808035	131890511	8553170	25	256,73,117,126,61,98,80,120,110,66,73,109,132,32,128,70,88,170,52,155,130,81,133,163,4815,	0,39756,41970,43122,44155,46906,50648,52367,53575,56486,56846,59998,61338,64050,64903,66248,67756,68972,70522,71860,74325,75674,76911,78542,82321,
#Partially deleted in new
chr6	131808033	131890864	chr6:131808033-131890864	0	+	131808035	131864937	789624	25	242,73,117,126,61,98,80,120,110,66,47,109,132,32,128,70,88,170,52,155,130,81,133,163,524,	0,39742,41956,43108,44141,46892,50634,52353,53561,56472,56858,59984,61324,64036,64889,66234,67742,68958,70508,71846,74311,75660,76897,78528,82307,
#Partially deleted in new
chr6	131808122	131850081	chr6:131808122-131850081	0	+	131808122	131826039	8553170	4	153,94,73,92,	0,17899,39653,41867,
#Deleted in new
chr6	131819802	131820091	chr6:131819802-131820091	7	-	131819802	131819802	16724991	1	289,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	131820333	131820653	chr6:131820333-131820653	3	+	131820333	131820333	8553170	1	320,	0,
#Deleted in new
chr6	131825980	131828413	chr6:131825980-131828413	7	-	131825980	131825980	16724991	1	2433,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	131849998	131866009	chr6:131849998-131866009	0	+	131849998	131855023	8553170	7	108,126,98,80,120,110,1504,	0,1143,4927,8669,10388,11596,14507,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	131849998	131877867	chr6:131849998-131877867	0	+	131849998	131855023	8553170	14	108,98,80,120,110,66,73,109,132,32,128,70,88,876,	0,4927,8669,10388,11596,14507,14867,18019,19359,22071,22924,24269,25777,26993,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	131861609	131877857	chr6:131861609-131877857	0	+	131861609	131861609	8553170	10	95,66,47,109,132,32,128,70,88,866,	0,2896,3282,6408,7748,10460,11313,12658,14166,15382,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	131868036	131880287	chr6:131868036-131880287	0	+	131868036	131868036	8553170	10	90,32,128,70,88,170,45,52,155,151,	0,4033,4886,6231,7739,8955,10082,10505,11843,12100,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	131901962	131920565	chr6:131901962-131920565	3	+	131901962	131901962	8553170	2	189,2116,	0,16487,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	131910190	131911527	chr6:131910190-131911527	3	+	131910190	131910190	8553170	1	1337,	0,
#Deleted in new
chr6	131948175	131951373	chr6:131948175-131951373	3	-	131949263	131951172	789624	5	1385,212,252,223,267,	0,1773,2116,2594,2931,
#Partially deleted in new
chr6	131950945	132077393	chr6:131950945-132077393	3	+	131950945	131950945	8553170	2	309,186,	0,126262,
#Partially deleted in new
chr6	132085083	132099279	chr6:132085083-132099279	3	+	132085083	132085083	8553170	2	203,349,	0,13847,
#Partially deleted in new
chr6	132090532	132099226	chr6:132090532-132099226	0	+	132090532	132090532	8553170	2	194,296,	0,8398,
#Deleted in new
chr6	132130251	132131795	chr6:132130251-132131795	3	-	132130251	132130251	8553170	1	1544,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	132131914	132136933	chr6:132131914-132136933	1	+	132131914	132131914	8553170	4	55,70,212,1494,	0,205,2357,3525,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	132133977	132147058	chr6:132133977-132147058	1	+	132133977	132133977	789624	2	506,839,	0,12242,
#Partially deleted in new
chr6	132134410	132169374	chr6:132134410-132169374	3	+	132134410	132134410	789624	3	73,122,374,	0,20245,34590,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	132160763	132169361	chr6:132160763-132169361	0	+	132160763	132160763	8553170	2	151,361,	0,8237,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	132160764	132164491	chr6:132160764-132164491	0	+	132160764	132160764	8553170	2	150,595,	0,3132,
#Deleted in new
chr6	132271981	132273332	chr6:132271981-132273332	7	+	132271981	132271981	16724991	1	1351,	0,
#Partially deleted in new
chr6	132296054	132401545	chr6:132296054-132401545	3	-	132297152	132401426	789624	12	1263,169,143,60,192,167,103,180,84,168,147,383,	0,1732,19580,24574,26624,27876,31958,32360,76553,76775,78576,105108,
#Partially deleted in new
chr6	132296068	132375065	chr6:132296068-132375065	1	-	132297152	132374837	789624	11	1249,169,143,60,192,167,103,180,84,168,435,	0,1718,19566,24560,26610,27862,31944,32346,76539,76761,78562,
#Partially deleted in new
chr6	132315696	132325147	chr6:132315696-132325147	0	-	132315696	132315696	8553170	5	81,60,192,167,68,	0,4932,6982,8234,9383,
#Partially deleted in new
chr6	132390421	132401475	chr6:132390421-132401475	1	-	132392215	132401426	789624	2	1878,313,	0,10741,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	132445866	132513062	chr6:132445866-132513062	3	-	132460757	132503530	789624	10	14984,83,73,97,53,138,94,70,143,56,	0,18126,22536,24084,24707,25596,26415,29726,57579,67140,
#Partially deleted in new
chr6	132461713	132513198	chr6:132461713-132513198	1	-	132461833	132503530	789624	10	147,83,73,97,53,138,94,70,143,192,	0,2279,6689,8237,8860,9749,10568,13879,41732,51293,
#Partially deleted in new
chr6	132469993	132513135	chr6:132469993-132513135	0	-	132469993	132469993	8553170	7	54,53,138,94,70,69,78,	0,580,1469,2288,5599,33452,43064,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	132475279	132513065	chr6:132475279-132513065	0	-	132475279	132475279	8553170	3	383,143,59,	0,28166,37727,
#Deleted in new
chr6	132518829	132519295	chr6:132518829-132519295	7	-	132518829	132518829	16724991	1	466,	0,
#Deleted in new
chr6	132538289	132539336	chr6:132538289-132539336	3	+	132538289	132539336	789624	1	1047,	0,
#Deleted in new
chr6	132552692	132553721	chr6:132552692-132553721	3	+	132552692	132553721	789624	1	1029,	0,
#Deleted in new
chr6	132559023	132559265	chr6:132559023-132559265	7	+	132559023	132559023	16724991	1	242,	0,
#Deleted in new
chr6	132570321	132571359	chr6:132570321-132571359	3	+	132570321	132571359	789624	1	1038,	0,
#Deleted in new
chr6	132588672	132589686	chr6:132588672-132589686	3	-	132588672	132589686	789624	1	1014,	0,
#Deleted in new
chr6	132594397	132595436	chr6:132594397-132595436	7	-	132594397	132594397	16724991	1	1039,	0,
#Deleted in new
chr6	132608224	132609302	chr6:132608224-132609302	7	-	132608224	132608224	16724991	1	1078,	0,
#Deleted in new
chr6	132608251	132609276	chr6:132608251-132609276	5	-	132608251	132608251	16724991	1	1025,	0,
#Deleted in new
chr6	132617021	132618178	chr6:132617021-132618178	3	-	132617149	132618070	789624	1	1157,	0,
#Partially deleted in new
chr6	132617149	132624275	chr6:132617149-132624275	1	-	132617149	132624275	789624	2	996,60,	0,7066,
#Deleted in new
chr6	132644983	132646003	chr6:132644983-132646003	3	-	132644983	132646003	789624	1	1020,	0,
#Deleted in new
chr6	132674884	132675383	chr6:132674884-132675383	7	+	132674884	132674884	16724991	1	499,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	132681589	132714049	chr6:132681589-132714049	3	-	132683139	132714035	0	7	1733,171,362,292,193,131,224,	0,2745,10633,11434,12400,30119,32236,
#Deleted in new
chr6	132698782	132699667	chr6:132698782-132699667	7	+	132698782	132698782	16724991	1	885,	0,
#Partially deleted in new
chr6	132722786	132734765	chr6:132722786-132734765	3	-	132726724	132734692	789624	7	268,174,374,291,193,131,286,	0,947,1819,3935,5954,11466,11693,
#Partially deleted in new
chr6	132722788	132734765	chr6:132722788-132734765	1	-	132728969	132734692	789624	7	266,174,374,291,239,131,286,	0,945,1817,3933,5952,11464,11691,
#Partially deleted in new
chr6	132722925	132734692	chr6:132722925-132734692	1	-	132728969	132734692	789624	6	129,174,374,239,131,213,	0,808,1680,5815,11327,11554,
#Partially deleted in new
chr6	132722925	132734765	chr6:132722925-132734765	1	-	132731427	132734692	789624	8	129,174,374,117,239,153,131,286,	0,808,1680,3796,5815,8449,11327,11554,
#Partially deleted in new
chr6	132722925	132734692	chr6:132722925-132734692	1	-	132726954	132734692	789624	6	129,174,374,291,131,213,	0,808,1680,3796,11327,11554,
#Partially deleted in new
chr6	132722925	132734692	chr6:132722925-132734692	1	-	132724933	132734692	789624	4	129,174,374,440,	0,808,1680,11327,
#Partially deleted in new
chr6	132722925	132734692	chr6:132722925-132734692	1	-	132724933	132734692	789624	5	129,174,374,131,213,	0,808,1680,11327,11554,
#Partially deleted in new
chr6	132722925	132734692	chr6:132722925-132734692	1	-	132724892	132734692	789624	6	129,174,374,193,131,213,	0,808,1680,5815,11327,11554,
#Partially deleted in new
chr6	132722925	132734692	chr6:132722925-132734692	1	-	132724933	132734692	789624	4	982,374,131,213,	0,1680,11327,11554,
#Partially deleted in new
chr6	132722925	132734692	chr6:132722925-132734692	1	-	132728969	132734692	789624	7	129,174,374,117,239,131,213,	0,808,1680,3796,5815,11327,11554,
#Partially deleted in new
chr6	132724920	132734765	chr6:132724920-132734765	1	-	132724933	132734692	789624	4	59,117,134,286,	0,1801,9332,9559,
#Partially deleted in new
chr6	132726993	132734333	chr6:132726993-132734333	0	-	132731427	132734333	789624	4	19,239,153,81,	0,1747,4381,7259,
#Partially deleted in new
chr6	132728911	132730660	chr6:132728911-132730660	0	-	132728911	132728911	8553170	2	22,536,	0,1213,
#Partially deleted in new
chr6	132733633	132734765	chr6:132733633-132734765	0	-	132733633	132733633	8553170	2	750,286,	0,846,
#Partially deleted in new
chr6	132743869	132758008	chr6:132743869-132758008	3	-	132744299	132757883	789624	7	622,171,374,289,193,131,338,	0,5825,7275,8591,11973,13546,13801,
#Partially deleted in new
chr6	132743869	132757883	chr6:132743869-132757883	0	-	132751472	132757883	789624	7	622,171,374,77,193,131,213,	0,5825,7275,8803,11973,13546,13801,
#Partially deleted in new
chr6	132743894	132757883	chr6:132743894-132757883	0	-	132752540	132757883	789624	8	597,171,374,117,77,193,131,213,	0,5800,7250,8566,8778,11948,13521,13776,
#Partially deleted in new
chr6	132744025	132757970	chr6:132744025-132757970	0	-	132751467	132757883	789624	7	466,171,370,289,193,131,300,	0,5669,7119,8435,11817,13390,13645,
#Partially deleted in new
chr6	132744195	132763447	chr6:132744195-132763447	1	-	132744299	132757724	789624	8	296,171,374,289,193,131,89,65,	0,5499,6949,8265,11647,13220,13475,19187,
#Partially deleted in new
chr6	132744299	132757883	chr6:132744299-132757883	1	-	132744299	132757883	789624	5	192,171,193,131,213,	0,5395,11543,13116,13371,
#Partially deleted in new
chr6	132744299	132757883	chr6:132744299-132757883	0	-	132751467	132757883	789624	6	192,171,374,193,131,213,	0,5395,6845,11543,13116,13371,
#Partially deleted in new
chr6	132744299	132757883	chr6:132744299-132757883	0	-	132749849	132757883	789624	4	192,171,131,213,	0,5395,13116,13371,
#Partially deleted in new
chr6	132744299	132757883	chr6:132744299-132757883	0	-	132751236	132757883	789624	6	192,171,134,193,131,213,	0,5395,6845,11543,13116,13371,
#Partially deleted in new
chr6	132749748	132757904	chr6:132749748-132757904	0	-	132753473	132757883	789624	6	117,374,74,193,131,234,	0,1396,3669,6094,7667,7922,
#Partially deleted in new
chr6	132752713	132763430	chr6:132752713-132763430	0	-	132753473	132757724	789624	6	36,74,193,131,89,48,	0,704,3129,4702,4957,10669,
#Partially deleted in new
chr6	132755881	132763459	chr6:132755881-132763459	0	-	132755881	132757883	789624	4	154,131,232,77,	0,1534,1789,7501,
#Partially deleted in new
chr6	132755913	132763455	chr6:132755913-132763455	0	-	132755913	132757724	789624	5	122,131,89,172,73,	0,1502,1757,4718,7469,
#Partially deleted in new
chr6	132757456	132763431	chr6:132757456-132763431	0	-	132757456	132757883	789624	4	90,232,172,49,	0,214,3175,5926,
#Deleted in new
chr6	132764659	132765458	chr6:132764659-132765458	7	+	132764659	132764659	16724991	1	799,	0,
#Partially deleted in new
chr6	132769369	132798553	chr6:132769369-132798553	1	-	132770269	132798456	789624	14	967,50,94,75,96,92,102,137,157,148,74,96,140,140,	0,1520,1666,2762,3623,4852,6958,9898,14563,18064,20394,20807,27612,29044,
#Partially deleted in new
chr6	132769382	132813339	chr6:132769382-132813339	1	-	132770269	132790236	8553170	15	954,50,94,75,96,92,102,137,157,148,74,96,81,140,47,	0,1507,1653,2749,3610,4839,6945,9885,14550,18051,20381,20794,21402,27599,43910,
#Partially deleted in new
chr6	132769382	132798495	chr6:132769382-132798495	0	-	132790820	132798456	8553170	15	954,50,94,118,96,92,102,137,157,148,74,96,81,140,82,	0,1507,1653,2749,3610,4839,6945,9885,14550,18051,20381,20794,21402,27599,29031,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr6	132769382	132813329	chr6:132769382-132813329	3	-	132770269	132797023	8553170	15	954,50,94,75,96,92,102,137,157,148,74,96,140,125,37,	0,1507,1653,2749,3610,4839,6945,9885,14550,18051,20381,20794,27599,37661,43910,
#Partially deleted in new
chr6	132769384	132813329	chr6:132769384-132813329	0	-	132770950	132797023	8553170	14	952,70,94,75,96,92,102,137,157,148,74,96,140,37,	0,1505,1651,2747,3608,4837,6943,9883,14548,18049,20379,20792,27597,43908,
#Partially deleted in new
chr6	132774241	132798522	chr6:132774241-132798522	0	-	132774241	132774241	8553170	5	72,102,49,140,109,	0,2086,15982,22740,24172,
#Partially deleted in new
chr6	132787476	132797121	chr6:132787476-132797121	0	-	132787476	132787476	8553170	5	105,76,74,96,140,	0,1977,2287,2700,9505,
#Partially deleted in new
chr6	132814440	132817564	chr6:132814440-132817564	3	+	132814768	132817542	0	6	173,51,117,103,102,85,	0,291,531,2020,2519,3039,
#Partially deleted in new
chr6	132814568	132817564	chr6:132814568-132817564	0	+	132814568	132814568	8553170	6	45,51,253,103,102,85,	0,163,403,1892,2391,2911,
#Deleted in new
chr6	132815306	132815379	chr6:132815306-132815379	3	+	132815306	132815306	789624	1	73,	0,
#Deleted in new
chr6	132816801	132816877	chr6:132816801-132816877	3	+	132816801	132816801	789624	1	76,	0,
#Deleted in new
chr6	132817218	132817348	chr6:132817218-132817348	3	+	132817218	132817218	789624	1	130,	0,
#Deleted in new
chr6	132868217	132868859	chr6:132868217-132868859	7	-	132868217	132868217	16724991	1	642,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	132891923	132893819	chr6:132891923-132893819	3	+	132891923	132891923	8553170	1	1896,	0,
#Deleted in new
chr6	132997550	132998040	chr6:132997550-132998040	7	-	132997550	132997550	16724991	1	490,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	133088079	133106578	chr6:133088079-133106578	3	+	133088079	133088079	8553170	6	498,1252,54,49,178,484,	0,738,8430,10190,11927,18015,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	133088127	133106198	chr6:133088127-133106198	0	+	133088127	133088127	5263520	4	450,54,178,104,	0,8382,11879,17967,
#Partially deleted in new
chr6	133150567	133150816	chr6:133150567-133150816	7	+	133150567	133150567	16724991	1	249,	0,
#Partially deleted in new
chr6	133240597	133528902	chr6:133240597-133528902	1	+	133274780	133528805	789624	19	240,251,98,50,125,67,143,144,80,166,137,84,90,59,161,115,122,101,178,	0,901,34118,141794,206032,220516,221737,222023,224181,227968,240865,242434,265508,272123,272280,274723,282458,284417,288127,
#Partially deleted in new
chr6	133241350	133532120	chr6:133241350-133532120	3	+	133274780	133528805	789624	20	399,98,50,125,69,93,67,143,144,80,166,137,84,90,59,161,115,122,101,3396,	0,33365,141041,205279,206760,215205,219763,220984,221270,223428,227215,240112,241681,264755,271370,271527,273970,281705,283803,287374,
#Partially deleted in new
chr6	133241350	133531413	chr6:133241350-133531413	1	+	133274780	133531226	789624	18	399,98,50,125,67,143,144,80,184,137,84,90,59,161,115,122,101,205,	0,33365,141041,205279,219763,220984,221270,223428,227215,240112,241681,264755,271370,271527,273970,281705,283664,289858,
#Partially deleted in new
chr6	133241356	133532119	chr6:133241356-133532119	1	+	133274780	133528805	789624	20	393,98,50,125,69,93,67,143,144,80,166,137,84,90,59,161,115,122,101,3395,	0,33359,141035,205273,206754,215199,219757,220978,221264,223422,227209,240106,241675,264749,271364,271521,273964,281699,283658,287368,
#Partially deleted in new
chr6	133241356	133532120	chr6:133241356-133532120	1	+	133274780	133528805	789624	20	393,98,50,125,69,93,67,143,144,80,166,137,84,90,59,161,115,122,101,3396,	0,33359,141035,205273,206754,215199,219757,220978,221264,223422,227209,240106,241675,264749,271364,271521,273964,281699,283797,287368,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	133241372	133248853	chr6:133241372-133248853	0	+	133241372	133241372	8553170	3	377,132,1990,	0,3725,5491,
#Partially deleted in new
chr6	133241417	133529530	chr6:133241417-133529530	1	+	133274780	133528805	789624	19	332,98,50,125,93,67,143,144,80,166,137,84,90,59,161,115,122,101,806,	0,33298,140974,205212,215138,219696,220917,221203,223361,227148,240045,241614,264688,271303,271460,273903,281638,283736,287307,
#Partially deleted in new
chr6	133241585	133529530	chr6:133241585-133529530	1	+	133274780	133528805	789624	20	164,98,50,125,69,93,67,143,144,80,184,137,84,90,59,161,115,122,101,806,	0,33130,140806,205044,206525,214970,219528,220749,221035,223193,226980,239877,241446,264520,271135,271292,273735,281470,283568,287139,
#Partially deleted in new
chr6	133241630	133529537	chr6:133241630-133529537	1	+	133274780	133528805	789624	19	119,98,50,125,93,67,143,144,80,166,137,84,90,59,161,115,122,101,813,	0,33085,140761,204999,214925,219483,220704,220990,223148,226935,239832,241401,264475,271090,271247,273690,281425,283384,287094,
#Partially deleted in new
chr6	133274780	133512964	chr6:133274780-133512964	0	+	133274780	133274780	8553170	15	33,50,125,69,93,67,143,144,80,166,137,84,90,59,19,	0,107611,171849,173330,181775,186333,187554,187840,189998,193785,206682,208251,231325,237940,238165,
#Partially deleted in new
chr6	133325210	133468569	chr6:133325210-133468569	0	+	133325210	133325210	8553170	9	204,50,125,93,67,114,144,80,4,	0,57181,121419,131345,135903,137153,137410,139568,143355,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	133360204	133461123	chr6:133360204-133461123	0	+	133360204	133360204	8553170	6	17,112,241,50,125,10,	0,354,2964,22187,86425,100909,
#Partially deleted in new
chr6	133435076	133439464	chr6:133435076-133439464	3	-	133435076	133435076	8553170	2	494,137,	0,4251,
#Partially deleted in new
chr6	133452856	133456605	chr6:133452856-133456605	3	-	133452856	133452856	8553170	3	190,55,72,	0,751,3677,
#Partially deleted in new
chr6	133462120	133462734	chr6:133462120-133462734	0	+	133462120	133462120	8553170	2	357,114,	0,500,
#Partially deleted in new
chr6	133462712	133513029	chr6:133462712-133513029	0	+	133462712	133462712	8553170	8	52,80,184,137,84,90,59,84,	0,2066,5853,18750,20319,43393,50008,50233,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	133502251	133511728	chr6:133502251-133511728	0	-	133502251	133502251	8553170	4	429,192,78,54,	0,3827,4992,9423,
#Partially deleted in new
chr6	133502251	133888982	chr6:133502251-133888982	3	-	133502251	133502251	789624	9	429,192,78,1579,59,76,93,75,379,	0,3827,4992,33528,65938,257933,266579,343625,386352,
#Partially deleted in new
chr6	133510385	133510693	chr6:133510385-133510693	7	-	133510385	133510385	16724991	1	308,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	133537173	133767608	chr6:133537173-133767608	0	-	133537173	133537173	8553170	4	185,121,59,212,	0,898,31016,230223,
#Partially deleted in new
chr6	133537212	133891936	chr6:133537212-133891936	0	-	133537212	133537212	8553170	4	146,59,93,250,	0,30977,231618,354474,
#Partially deleted in new
chr6	133537310	133888982	chr6:133537310-133888982	0	-	133537310	133537310	8553170	6	48,55,76,93,75,379,	0,30883,222874,231520,308566,351293,
#Partially deleted in new
chr6	133540783	133541174	chr6:133540783-133541174	3	+	133540783	133540783	8553170	1	391,	0,
#Deleted in new
chr6	133676728	133677429	chr6:133676728-133677429	7	-	133676728	133676728	16724991	1	701,	0,
#Partially deleted in new
chr6	133760184	133845951	chr6:133760184-133845951	0	-	133760184	133760184	8553170	3	76,93,75,	0,8646,85692,
#Partially deleted in new
chr6	133821146	133851288	chr6:133821146-133851288	3	+	133821146	133821146	5263520	3	589,132,92,	0,16446,30050,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	133837183	133851800	chr6:133837183-133851800	1	+	133837183	133837183	8553170	3	39,132,604,	0,409,14013,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	133884721	133892802	chr6:133884721-133892802	0	-	133884721	133884721	8553170	3	2951,609,1116,	0,3882,6965,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	133884721	133892802	chr6:133884721-133892802	0	-	133884721	133884721	8553170	3	2951,140,1116,	0,3882,6965,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	133884721	133892802	chr6:133884721-133892802	1	-	133884721	133884721	8553170	4	2951,140,87,1116,	0,3882,4404,6965,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	133884721	133892802	chr6:133884721-133892802	0	-	133884721	133884721	8553170	3	2951,827,1116,	0,3882,6965,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	133884721	133892802	chr6:133884721-133892802	0	-	133884721	133884721	8553170	2	2951,1116,	0,6965,
#Deleted in new
chr6	133889137	133895553	chr6:133889137-133895553	3	+	133889397	133891802	789624	2	710,3841,	0,2575,
#Deleted in new
chr6	133889334	133895553	chr6:133889334-133895553	1	+	133889397	133891802	789624	3	513,98,2399,	0,2378,3820,
#Partially deleted in new
chr6	133952169	133984479	chr6:133952169-133984479	0	+	133980125	133984479	789624	5	561,179,83,64,104,	0,27912,30398,30647,32206,
#Partially deleted in new
chr6	133952169	133987499	chr6:133952169-133987499	1	+	133980125	133987040	789624	7	561,179,83,64,104,95,539,	0,27912,30398,30647,32206,32407,34791,
#Partially deleted in new
chr6	133952285	133980260	chr6:133952285-133980260	0	+	133980125	133980260	789624	3	445,241,179,	0,899,27796,
#Partially deleted in new
chr6	133953194	133990432	chr6:133953194-133990432	3	+	133980125	133987040	789624	7	231,179,83,64,104,95,3472,	0,26887,29373,29622,31181,31382,33766,
#Partially deleted in new
chr6	133953194	133984723	chr6:133953194-133984723	1	+	133980125	133984682	789624	6	231,179,83,64,104,147,	0,26887,29373,29622,31181,31382,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	133953223	133982872	chr6:133953223-133982872	0	+	133980125	133982872	789624	5	202,103,179,83,56,	0,15631,26858,29344,29593,
#Partially deleted in new
chr6	133982816	133987499	chr6:133982816-133987499	0	+	133982816	133982816	8553170	3	64,31,539,	0,1632,4144,
#Partially deleted in new
chr6	133984375	133985968	chr6:133984375-133985968	0	+	133984375	133984375	8553170	3	104,95,85,	0,201,1508,
#Partially deleted in new
chr6	133988696	134052636	chr6:133988696-134052636	3	-	133991154	134052480	789624	5	2612,133,123,1341,259,	0,13300,18115,39684,63681,
#Deleted in new
chr6	134009032	134009218	chr6:134009032-134009218	7	+	134009032	134009032	16724991	1	186,	0,
#Deleted in new
chr6	134115234	134115736	chr6:134115234-134115736	7	-	134115234	134115234	16724991	1	502,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	134133572	134133868	chr6:134133572-134133868	3	+	134133572	134133572	8553170	1	296,	0,
#Partially deleted in new
chr6	134169245	134318058	chr6:134169245-134318058	1	-	134170267	134317460	0	14	1190,90,156,96,124,113,132,84,105,76,76,76,216,667,	0,1580,1777,2391,2947,3416,3777,4028,4216,4759,5265,38110,92687,148146,
#Deleted in new
chr6	134169247	134174866	chr6:134169247-134174866	0	-	134169247	134169247	8553170	2	5339,135,	0,5484,
#Deleted in new
chr6	134169249	134175991	chr6:134169249-134175991	1	-	134170267	134175661	0	12	1186,90,156,96,124,113,132,84,105,76,76,448,	0,1576,1773,2387,2943,3412,3773,4024,4212,4755,5261,6294,
#Deleted in new
chr6	134169251	134174896	chr6:134169251-134174896	3	-	134170267	134174807	0	12	1184,90,156,96,124,113,132,84,105,76,76,165,	0,1574,1771,2385,2941,3410,3771,4022,4210,4753,5259,5480,
#Deleted in new
chr6	134169251	134172907	chr6:134169251-134172907	0	-	134169251	134169251	8553170	6	1184,90,156,96,124,246,	0,1574,1771,2385,2941,3410,
#Deleted in new
chr6	134169283	134174842	chr6:134169283-134174842	0	-	134169283	134169283	8553170	11	1152,353,96,124,113,132,84,105,76,76,111,	0,1542,2353,2909,3378,3739,3990,4178,4721,5227,5448,
#Deleted in new
chr6	134169352	134174865	chr6:134169352-134174865	1	-	134170267	134174632	0	11	1083,90,156,96,124,113,132,84,105,76,355,	0,1473,1670,2284,2840,3309,3670,3921,4109,4652,5158,
#Partially deleted in new
chr6	134169880	134177905	chr6:134169880-134177905	1	-	134170267	134177822	0	12	555,90,156,96,124,113,132,84,105,76,76,243,	0,945,1142,1756,2312,2781,3142,3393,3581,4124,4630,7782,
#Deleted in new
chr6	134170105	134174864	chr6:134170105-134174864	1	-	134170267	134174807	789624	11	330,90,156,96,124,113,84,105,76,76,133,	0,720,917,1531,2087,2556,3168,3356,3899,4405,4626,
#Deleted in new
chr6	134170799	134172297	chr6:134170799-134172297	0	-	134170799	134170799	8553170	3	379,96,105,	0,837,1393,
#Deleted in new
chr6	134171104	134172134	chr6:134171104-134172134	0	-	134171104	134171104	8553170	2	74,498,	0,532,
#Deleted in new
chr6	134171364	134172739	chr6:134171364-134172739	0	-	134171364	134171364	8553170	3	368,124,78,	0,828,1297,
#Deleted in new
chr6	134171650	134174379	chr6:134171650-134174379	0	-	134171650	134171650	8553170	8	82,124,113,132,84,105,76,74,	0,542,1011,1372,1623,1811,2354,2655,
#Deleted in new
chr6	134172599	134173345	chr6:134172599-134173345	0	-	134172599	134172599	8553170	2	175,323,	0,423,
#Deleted in new
chr6	134172723	134174247	chr6:134172723-134174247	0	-	134172723	134172723	8553170	5	51,132,84,105,243,	0,299,550,738,1281,
#Deleted in new
chr6	134172725	134174868	chr6:134172725-134174868	0	-	134172725	134172725	8553170	6	49,132,293,76,76,137,	0,297,548,1279,1785,2006,
#Deleted in new
chr6	134172776	134174191	chr6:134172776-134174191	0	-	134172776	134172776	8553170	3	581,105,187,	0,685,1228,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	134173063	134230467	chr6:134173063-134230467	0	-	134173063	134173063	8553170	7	91,84,105,76,76,76,68,	0,210,398,941,1447,34292,57336,
#Partially deleted in new
chr6	134173080	134249540	chr6:134173080-134249540	0	-	134173080	134173080	8553170	7	74,84,105,76,76,76,85,	0,193,381,924,1430,34275,76375,
#Partially deleted in new
chr6	134173116	134177860	chr6:134173116-134177860	0	-	134173116	134173116	8553170	5	241,105,76,76,198,	0,345,888,1394,4546,
#Deleted in new
chr6	134173171	134174861	chr6:134173171-134174861	0	-	134173171	134173171	8553170	5	186,105,76,76,130,	0,290,833,1339,1560,
#Partially deleted in new
chr6	134173554	134317911	chr6:134173554-134317911	0	-	134173554	134262124	789624	6	12,76,76,76,216,97,	0,450,956,33801,88378,144260,
#Deleted in new
chr6	134173699	134174866	chr6:134173699-134174866	0	-	134173699	134173699	8553170	3	381,76,135,	0,811,1032,
#Partially deleted in new
chr6	134173800	134177847	chr6:134173800-134177847	0	-	134173800	134173800	8553170	3	280,76,185,	0,710,3862,
#Deleted in new
chr6	134173908	134174861	chr6:134173908-134174861	0	-	134173908	134173908	8553170	2	172,351,	0,602,
#Partially deleted in new
chr6	134180254	134262017	chr6:134180254-134262017	0	-	134180254	134180254	8553170	3	89,76,85,	0,27101,81678,
#Deleted in new
chr6	134211449	134211527	chr6:134211449-134211527	7	+	134211449	134211449	16724991	1	78,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	134214944	134230481	chr6:134214944-134230481	0	-	134214944	134214944	8553170	3	149,92,82,	0,3736,15455,
#Partially deleted in new
chr6	134214953	134262059	chr6:134214953-134262059	0	-	134215054	134262059	789624	2	140,127,	0,46979,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	134259792	134317629	chr6:134259792-134317629	1	-	134261755	134317460	789624	2	2356,238,	0,57599,
#Partially deleted in new
chr6	134262037	134318112	chr6:134262037-134318112	0	-	134262037	134317460	789624	3	111,151,298,	0,55354,55777,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	134283091	134283193	chr6:134283091-134283193	3	+	134283091	134283091	8553170	1	102,	0,
#Partially deleted in new
chr6	134296996	134298695	chr6:134296996-134298695	7	-	134296996	134296996	16724991	2	506,893,	0,806,
#Partially deleted in new
chr6	134393141	134393900	chr6:134393141-134393900	7	-	134393141	134393141	16724991	2	359,75,	0,684,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	134428239	134520585	chr6:134428239-134520585	3	-	134428239	134428239	8553170	5	976,68,129,110,77,	0,19694,26213,46876,92269,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	134437715	134504581	chr6:134437715-134504581	3	+	134437715	134437715	789624	3	166,109,1794,	0,27025,65072,
#Partially deleted in new
chr6	134447429	134454581	chr6:134447429-134454581	1	-	134447429	134447429	8553170	3	371,68,129,	0,504,7023,
#Partially deleted in new
chr6	134464976	134504019	chr6:134464976-134504019	0	+	134464976	134464976	8553170	3	82,131,1232,	0,2837,37811,
#Partially deleted in new
chr6	134476629	134504019	chr6:134476629-134504019	0	+	134476629	134476629	8553170	2	301,1232,	0,26158,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	134520162	134673960	chr6:134520162-134673960	3	-	134520162	134520162	8553170	9	458,203,133,1189,227,248,49,80,56,	0,3169,3943,4192,10675,19926,20412,152348,153742,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	134525313	134534669	chr6:134525313-134534669	0	-	134525313	134525313	8553170	4	230,227,62,231,	0,5524,6720,9125,
#Partially deleted in new
chr6	134525317	134531006	chr6:134525317-134531006	0	-	134525317	134525317	8553170	2	222,169,	0,5520,
#Partially deleted in new
chr6	134525324	134540344	chr6:134525324-134540344	0	-	134525324	134525324	789624	3	219,227,446,	0,5513,14574,
#Duplicated in new
chr6	134525324	134659836	chr6:134525324-134659836	0	-	134525324	134525324	8553170	3	219,227,88,	0,5513,134424,
#Partially deleted in new
chr6	134603563	134604698	chr6:134603563-134604698	7	-	134603563	134603563	16724991	1	1135,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	134606298	134609437	chr6:134606298-134609437	3	-	134606298	134606298	8553170	2	138,341,	0,2798,
#Partially deleted in new
chr6	134636488	134642495	chr6:134636488-134642495	3	+	134636488	134636488	8553170	3	73,84,213,	0,3936,5794,
#Deleted in new
chr6	134706059	134707349	chr6:134706059-134707349	3	-	134706059	134706059	8553170	2	839,90,	0,1200,
#Partially deleted in new
chr6	134897873	134898759	chr6:134897873-134898759	7	+	134897873	134897873	16724991	1	886,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	134917389	134950122	chr6:134917389-134950122	3	-	134918414	134950053	789624	7	1478,162,257,150,156,148,207,	0,11664,15386,21876,25019,26429,32526,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	134917395	134950115	chr6:134917395-134950115	1	-	134918414	134950053	789624	6	1472,257,150,156,148,200,	0,15380,21870,25013,26423,32520,
#Partially deleted in new
chr6	134918159	134950089	chr6:134918159-134950089	0	-	134940180	134950053	789624	7	708,257,150,41,156,148,174,	0,14616,21106,22021,24249,25659,31756,
#Partially deleted in new
chr6	134918172	134950084	chr6:134918172-134950084	1	-	134918414	134950053	789624	6	695,162,257,156,148,169,	0,10881,14603,24236,25646,31743,
#Partially deleted in new
chr6	134918529	134929161	chr6:134918529-134929161	0	-	134918529	134929161	789624	2	338,66,	0,10566,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	134942492	134944235	chr6:134942492-134944235	0	-	134942492	134942538	789624	2	72,417,	0,1326,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr6	134960377	135054898	chr6:134960377-135054898	3	-	134965278	135054691	0	18	4913,145,101,109,91,105,69,118,75,147,118,166,260,109,195,126,66,250,	0,5951,8860,18301,18800,22080,24963,25688,26358,27267,33380,36399,37019,42356,79195,81623,90204,94271,
#Partially deleted in new
chr6	134964628	134983573	chr6:134964628-134983573	0	-	134964628	134964628	8553170	6	662,145,101,109,91,1116,	0,1700,4609,14050,14549,17829,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr6	134964628	135027196	chr6:134964628-135027196	1	-	134965278	135002780	789624	15	662,145,101,109,91,105,69,118,75,147,118,166,260,109,343,	0,1700,4609,14050,14549,17829,20712,21437,22107,23016,29129,32148,32768,38105,62225,
#Partially deleted in new
chr6	134964630	135054819	chr6:134964630-135054819	1	-	134965278	135054691	789624	17	660,145,101,109,91,105,69,118,75,147,118,166,260,109,126,66,171,	0,1698,4607,14048,14547,17827,20710,21435,22105,23014,29127,32146,32766,38103,77370,85951,90018,
#Partially deleted in new
chr6	134964632	135054819	chr6:134964632-135054819	1	-	134965278	135054691	0	17	658,145,101,109,91,105,69,118,75,147,118,166,260,109,195,66,171,	0,1696,4605,14046,14545,17825,20708,21433,22103,23012,29125,32144,32764,38101,74940,85949,90016,
#Partially deleted in new
chr6	134964841	135050621	chr6:134964841-135050621	0	-	134965278	135050621	789624	15	449,145,101,109,91,105,69,118,75,147,118,166,260,109,40,	0,1487,4396,13837,14336,17616,20499,21224,21894,22803,28916,31935,32555,37892,85740,
#Partially deleted in new
chr6	134965148	135050644	chr6:134965148-135050644	0	-	134996932	135050644	789624	15	142,145,101,109,91,105,69,118,75,147,118,166,25,126,63,	0,1180,4089,13530,14029,17309,20192,20917,21587,22496,28609,31628,32248,76852,85433,
#Deleted in new
chr6	134979337	134979432	chr6:134979337-134979432	3	-	134979337	134979337	5263520	1	95,	0,
#Partially deleted in new
chr6	134982292	134987745	chr6:134982292-134987745	0	-	134982413	134987745	789624	5	270,69,118,75,101,	0,3048,3773,4443,5352,
#Partially deleted in new
chr6	135002620	135054803	chr6:135002620-135054803	1	-	135002840	135054691	789624	6	222,216,195,126,66,155,	0,35190,36952,39380,47961,52028,
#Partially deleted in new
chr6	135002781	135054817	chr6:135002781-135054817	0	-	135002781	135054691	789624	4	61,195,126,169,	0,36791,39219,51867,
#Partially deleted in new
chr6	135002814	135103056	chr6:135002814-135103056	0	-	135002814	135103015	789624	5	28,195,126,66,129,	0,36758,39186,47767,100113,
#Partially deleted in new
chr6	135035856	135054884	chr6:135035856-135054884	1	-	135036557	135054691	0	5	2170,195,126,66,236,	0,3716,6144,14725,18792,
#Partially deleted in new
chr6	135036695	135054800	chr6:135036695-135054800	1	-	135036780	135054691	789624	5	99,195,126,66,152,	0,2877,5305,13886,17953,
#Partially deleted in new
chr6	135037848	135054852	chr6:135037848-135054852	1	-	135037912	135054691	789624	3	183,195,204,	0,1724,16800,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	135055032	135060550	chr6:135055032-135060550	3	+	135055032	135055032	8553170	2	454,336,	0,5182,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr6	135181314	135219171	chr6:135181314-135219171	1	+	135181513	135217980	789624	17	222,118,72,93,221,235,81,105,255,143,115,126,111,256,2,108,1308,	0,4588,6519,8476,8812,11009,12523,13041,14433,17593,18770,18975,20324,21099,21633,21902,36549,
#Partially deleted in new
chr6	135181314	135219167	chr6:135181314-135219167	0	+	135181513	135199529	789624	16	222,118,72,93,221,235,81,105,255,143,56,115,126,111,108,1304,	0,4588,6519,8476,8812,11009,12523,13041,14433,17593,18211,18770,18975,20324,21902,36549,
#Partially deleted in new
chr6	135181314	135219167	chr6:135181314-135219167	1	+	135181513	135217980	789624	16	222,118,72,93,221,235,81,105,255,363,143,115,126,111,108,1304,	0,4588,6519,8476,8812,11009,12523,13041,14433,15646,17593,18770,18975,20324,21902,36549,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr6	135181314	135219167	chr6:135181314-135219167	0	+	135181513	135203263	789624	16	222,118,72,93,221,235,81,105,255,143,115,126,111,256,108,1304,	0,4588,6519,8476,8812,11009,12523,13041,14433,17593,18770,18975,20324,21099,21902,36549,
#Partially deleted in new
chr6	135181314	135219171	chr6:135181314-135219171	1	+	135181513	135217980	789624	15	222,118,72,93,221,235,81,96,255,143,115,126,111,108,1308,	0,4588,6519,8476,8812,11009,12523,13041,14433,17593,18770,18975,20324,21902,36549,
#Partially deleted in new
chr6	135181314	135219167	chr6:135181314-135219167	0	+	135181513	135195064	789624	16	222,118,72,93,221,235,81,96,122,255,143,115,126,111,108,1304,	0,4588,6519,8476,8812,11009,12523,13041,13645,14433,17593,18770,18975,20324,21902,36549,
#Partially deleted in new
chr6	135181314	135219167	chr6:135181314-135219167	0	+	135181513	135195064	789624	16	222,118,72,93,221,235,81,105,122,255,143,115,126,111,108,1304,	0,4588,6519,8476,8812,11009,12523,13041,13645,14433,17593,18770,18975,20324,21902,36549,
#Partially deleted in new
chr6	135181314	135219167	chr6:135181314-135219167	0	+	135181513	135196731	789624	16	222,118,72,93,221,235,81,105,255,183,143,115,126,111,108,1304,	0,4588,6519,8476,8812,11009,12523,13041,14433,15411,17593,18770,18975,20324,21902,36549,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr6	135181314	135219171	chr6:135181314-135219171	1	+	135181513	135203241	789624	16	222,118,72,93,221,235,81,105,255,143,115,126,111,260,108,1308,	0,4588,6519,8476,8812,11009,12523,13041,14433,17593,18770,18975,20324,21099,21902,36549,
#Partially deleted in new
chr6	135181314	135219167	chr6:135181314-135219167	3	+	135181513	135203748	789624	16	222,118,72,93,221,235,81,105,255,143,115,126,111,108,233,1307,	0,4588,6519,8476,8812,11009,12523,13041,14433,17593,18770,18975,20324,21902,22401,36546,
#Partially deleted in new
chr6	135181327	135219173	chr6:135181327-135219173	1	+	135181513	135217980	789624	15	209,118,72,93,221,235,81,105,255,143,115,126,111,108,1310,	0,4575,6506,8463,8799,10996,12510,13028,14420,17580,18757,18962,20311,21889,36536,
#Partially deleted in new
chr6	135181380	135203766	chr6:135181380-135203766	1	+	135181513	135203354	789624	14	156,118,72,93,221,235,81,105,255,143,115,126,111,550,	0,4522,6453,8410,8746,10943,12457,12975,14367,17527,18704,18909,20258,21836,
#Partially deleted in new
chr6	135181420	135194542	chr6:135181420-135194542	1	+	135181513	135194484	789624	7	116,118,93,221,235,81,187,	0,4482,8370,8706,10903,12417,12935,
#Partially deleted in new
chr6	135181507	135219172	chr6:135181507-135219172	1	+	135181513	135217980	789624	14	29,118,72,93,221,235,81,105,143,115,126,111,108,1309,	0,4395,6326,8283,8619,10816,12330,12848,17400,18577,18782,20131,21709,36356,
#Partially deleted in new
chr6	135181513	135219167	chr6:135181513-135219167	0	+	135181513	135199529	789624	17	23,118,72,93,221,235,81,105,207,363,143,56,115,126,111,108,1304,	0,4389,6320,8277,8613,10810,12324,12842,14234,15447,17394,18012,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135217980	chr6:135181513-135217980	0	+	135181513	135192329	789624	13	23,118,93,235,81,105,255,143,115,126,111,108,117,	0,4389,8277,10810,12324,12842,14234,17394,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135217980	chr6:135181513-135217980	0	+	135181513	135200574	789624	15	23,118,72,93,221,235,81,105,255,143,115,385,111,108,117,	0,4389,6320,8277,8613,10810,12324,12842,14234,17394,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135219167	chr6:135181513-135219167	0	+	135181513	135195064	789624	17	23,118,72,93,221,235,81,105,122,255,143,56,115,126,111,108,1304,	0,4389,6320,8277,8613,10810,12324,12842,13446,14234,17394,18012,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135217980	chr6:135181513-135217980	0	+	135181513	135198914	789624	15	23,118,72,93,221,235,81,105,170,143,115,126,111,108,117,	0,4389,6320,8277,8613,10810,12324,12842,14234,17394,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135217980	chr6:135181513-135217980	0	+	135181513	135197111	789624	16	23,118,72,93,221,235,81,96,170,363,143,115,126,111,108,117,	0,4389,6320,8277,8613,10810,12324,12842,14234,15447,17394,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135219167	chr6:135181513-135219167	0	+	135181513	135198914	789624	16	23,118,72,93,221,235,81,105,170,143,56,115,126,111,108,1304,	0,4389,6320,8277,8613,10810,12324,12842,14234,17394,18012,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135217980	chr6:135181513-135217980	0	+	135181513	135195064	789624	17	23,118,72,93,221,235,81,96,122,255,363,143,115,126,111,108,117,	0,4389,6320,8277,8613,10810,12324,12842,13446,14234,15447,17394,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135219167	chr6:135181513-135219167	0	+	135181513	135199529	789624	16	23,118,72,93,221,235,81,96,255,143,56,115,126,111,108,1304,	0,4389,6320,8277,8613,10810,12324,12842,14234,17394,18012,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135217980	chr6:135181513-135217980	0	+	135181513	135197111	789624	16	23,118,72,93,221,235,81,105,170,363,143,115,126,111,108,117,	0,4389,6320,8277,8613,10810,12324,12842,14234,15447,17394,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135217980	chr6:135181513-135217980	0	+	135181513	135196774	789624	16	23,118,72,93,221,235,81,105,170,183,143,115,126,111,108,117,	0,4389,6320,8277,8613,10810,12324,12842,14234,15212,17394,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135218006	chr6:135181513-135218006	0	+	135181513	135201655	789624	15	23,118,72,93,221,235,81,105,255,143,115,268,111,108,143,	0,4389,6320,8277,8613,10810,12324,12842,14234,17394,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135217980	chr6:135181513-135217980	0	+	135181513	135195064	789624	15	23,118,93,221,235,81,105,122,255,143,115,126,111,108,117,	0,4389,8277,8613,10810,12324,12842,13446,14234,17394,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135217980	chr6:135181513-135217980	1	+	135181513	135217980	789624	16	23,118,72,93,221,235,81,96,255,363,143,115,126,111,108,117,	0,4389,6320,8277,8613,10810,12324,12842,14234,15447,17394,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135217980	chr6:135181513-135217980	0	+	135181513	135196774	789624	16	23,118,72,93,221,235,81,96,170,598,143,115,126,111,108,117,	0,4389,6320,8277,8613,10810,12324,12842,14234,15212,17394,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135219167	chr6:135181513-135219167	0	+	135181513	135195064	789624	17	23,118,72,93,221,235,81,105,122,170,143,56,115,126,111,108,1304,	0,4389,6320,8277,8613,10810,12324,12842,13446,14234,17394,18012,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135219167	chr6:135181513-135219167	0	+	135181513	135199529	789624	15	23,118,72,93,221,235,81,105,143,56,115,126,111,108,1304,	0,4389,6320,8277,8613,10810,12324,12842,17394,18012,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135217980	chr6:135181513-135217980	0	+	135181513	135192329	789624	15	23,118,72,93,235,81,105,122,255,143,115,126,111,108,117,	0,4389,6320,8277,10810,12324,12842,13446,14234,17394,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135217980	chr6:135181513-135217980	0	+	135181513	135196774	789624	16	23,118,72,93,221,235,81,105,170,598,143,115,126,111,108,117,	0,4389,6320,8277,8613,10810,12324,12842,14234,15212,17394,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135217980	chr6:135181513-135217980	0	+	135181513	135196731	789624	16	23,118,72,93,221,235,81,105,255,598,143,115,126,111,108,117,	0,4389,6320,8277,8613,10810,12324,12842,14234,15212,17394,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135217980	chr6:135181513-135217980	1	+	135181513	135217980	789624	14	23,118,72,93,221,235,81,255,143,115,126,111,108,117,	0,4389,6320,8277,8613,10810,12324,14234,17394,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135219167	chr6:135181513-135219167	0	+	135181513	135196731	789624	17	23,118,72,93,221,235,81,105,255,183,143,56,115,126,111,108,1304,	0,4389,6320,8277,8613,10810,12324,12842,14234,15212,17394,18012,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135181513	135217980	chr6:135181513-135217980	1	+	135181513	135217980	789624	14	23,118,72,93,221,235,81,105,255,143,115,126,108,117,	0,4389,6320,8277,8613,10810,12324,12842,14234,17394,18571,18776,21703,36350,
#Partially deleted in new
chr6	135181513	135217980	chr6:135181513-135217980	1	+	135181513	135217980	789624	16	23,118,72,93,221,235,81,105,207,363,143,115,126,111,108,117,	0,4389,6320,8277,8613,10810,12324,12842,14234,15447,17394,18571,18776,20125,21703,36350,
#Partially deleted in new
chr6	135185876	135219171	chr6:135185876-135219171	0	+	135185876	135185876	8553170	15	144,72,93,221,235,81,96,122,255,143,115,126,111,108,1308,	0,1957,3914,4250,6447,7961,8479,9083,9871,13031,14208,14413,15762,17340,31987,
#Partially deleted in new
chr6	135186017	135194686	chr6:135186017-135194686	0	+	135186017	135194484	789624	7	3,72,93,221,235,81,331,	0,1816,3773,4109,6306,7820,8338,
#Deleted in new
chr6	135195082	135195995	chr6:135195082-135195995	3	-	135195082	135195082	8553170	2	346,103,	0,810,
#Deleted in new
chr6	135195747	135197323	chr6:135195747-135197323	0	+	135195747	135196731	789624	3	255,183,363,	0,978,1213,
#Deleted in new
chr6	135203216	135203950	chr6:135203216-135203950	0	+	135203216	135203216	8553170	2	108,235,	0,499,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	135239159	135239256	chr6:135239159-135239256	3	+	135239159	135239159	5263520	1	97,	0,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr6	135283531	135497745	chr6:135283531-135497745	3	-	135285644	135492237	0	27	2116,103,59,98,163,56,121,27,197,141,131,119,107,230,124,133,153,186,96,193,220,182,560,54,125,64,163,	0,6891,16968,34987,39630,74600,111244,121419,127816,143635,145097,146350,147676,149495,154843,159050,163476,164758,169809,172202,173962,179593,182282,184049,207091,208696,214051,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr6	135283985	135497765	chr6:135283985-135497765	1	-	135285644	135492237	0	28	1662,103,59,98,163,56,121,27,197,141,131,119,107,230,124,133,153,186,96,193,220,182,560,54,125,64,62,183,	0,6437,16514,34533,39176,74146,110790,120965,127362,143181,144643,145896,147222,149041,154389,158596,163022,164304,169355,171748,173508,179139,181828,183595,206637,208242,213202,213597,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr6	135284895	135442685	chr6:135284895-135442685	0	-	135302808	135442685	789624	19	752,150,103,59,132,106,98,163,56,121,27,197,141,131,119,107,230,124,104,	0,1503,5527,15604,16512,17816,33623,38266,73236,109880,120055,126452,142271,143733,144986,146312,148131,153479,157686,
#Partially deleted in new
chr6	135285184	135300833	chr6:135285184-135300833	0	-	135285184	135285184	8553170	3	463,103,334,	0,5238,15315,
#Partially deleted in new
chr6	135285291	135448414	chr6:135285291-135448414	0	-	135285625	135448414	789624	17	356,59,98,163,56,121,27,197,141,131,119,107,230,124,133,153,125,	0,15208,33227,37870,72840,109484,119659,126056,141875,143337,144590,145916,147735,153083,157290,161716,162998,
#Partially deleted in new
chr6	135285294	135300532	chr6:135285294-135300532	0	-	135297437	135300532	789624	4	353,103,61,33,	0,5128,12137,15205,
#Partially deleted in new
chr6	135285295	135497776	chr6:135285295-135497776	1	-	135285644	135492237	0	29	352,103,59,98,163,56,121,27,197,141,131,119,107,230,124,133,153,186,96,193,220,182,560,54,125,64,85,62,194,	0,5127,15204,33223,37866,72836,109480,119655,126052,141871,143333,144586,145912,147731,153079,157286,161712,162994,168045,170438,172198,177829,180518,182285,205327,206932,210518,211892,212287,
#Partially deleted in new
chr6	135285380	135300653	chr6:135285380-135300653	0	-	135285380	135285380	8553170	2	267,154,	0,15119,
#Partially deleted in new
chr6	135301567	135307158	chr6:135301567-135307158	3	+	135301567	135301567	8553170	3	123,130,324,	0,3466,5267,
#Partially deleted in new
chr6	135302372	135323379	chr6:135302372-135323379	0	-	135302372	135302372	8553170	3	445,98,218,	0,16146,20789,
#Partially deleted in new
chr6	135318433	135497740	chr6:135318433-135497740	0	-	135442620	135492237	0	25	183,56,121,27,197,141,131,119,107,230,76,124,90,153,186,96,193,220,182,560,54,125,64,62,158,	0,39698,76342,86517,92914,108733,110195,111448,112774,114593,116723,119941,124148,128574,129856,134907,137300,139060,144691,147380,149147,172189,173794,178754,179149,
#Partially deleted in new
chr6	135387783	135497745	chr6:135387783-135497745	1	-	135387980	135492237	0	23	250,121,27,197,141,131,119,107,230,124,133,153,186,96,193,220,182,560,54,125,64,62,163,	0,6992,17167,23564,39383,40845,42098,43424,45243,50591,54798,59224,60506,65557,67950,69710,75341,78030,79797,102839,104444,109404,109799,
#Partially deleted in new
chr6	135394656	135411508	chr6:135394656-135411508	0	-	135394695	135411508	789624	3	240,27,161,	0,10294,16691,
#Partially deleted in new
chr6	135463136	135497737	chr6:135463136-135497737	0	-	135463136	135492237	789624	5	170,560,125,64,155,	0,2677,27486,29091,34446,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	135474503	135474609	chr6:135474503-135474609	3	-	135474503	135474503	8553170	1	106,	0,
#Partially deleted in new
chr6	135489916	135497649	chr6:135489916-135497649	1	-	135490195	135492237	789624	6	309,125,64,85,62,67,	0,706,2311,5897,7271,7666,
#Partially deleted in new
chr6	135490457	135492378	chr6:135490457-135492378	1	-	135490610	135492237	789624	2	290,151,	0,1770,
#Partially deleted in new
chr6	135490459	135495640	chr6:135490459-135495640	1	-	135490610	135492237	789624	3	288,64,328,	0,1768,4853,
#Partially deleted in new
chr6	135492251	135497740	chr6:135492251-135497740	0	-	135492251	135492251	8553170	5	40,171,85,62,158,	0,3287,3562,4936,5331,
#Partially deleted in new
chr6	135497800	135518789	chr6:135497800-135518789	0	+	135497800	135497800	8553170	2	200,197,	0,20792,
#Partially deleted in new
chr6	135497805	135518789	chr6:135497805-135518789	0	+	135497805	135497805	8553170	4	195,114,90,197,	0,598,1546,20787,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	135497853	135690835	chr6:135497853-135690835	3	+	135497853	135497853	789624	4	147,84,136,1213,	0,144339,174440,191769,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	135497936	135517059	chr6:135497936-135517059	0	+	135497936	135497936	8553170	4	64,114,107,179,	0,467,16123,18944,
#Partially deleted in new
chr6	135497955	135521149	chr6:135497955-135521149	1	+	135497955	135497955	8553170	4	45,114,238,258,	0,448,20637,22936,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	135497968	135642955	chr6:135497968-135642955	1	+	135497968	135497968	8553170	5	32,114,130,163,763,	0,435,133642,137720,144224,
#Partially deleted in new
chr6	135619164	135620171	chr6:135619164-135620171	7	-	135619164	135619164	16724991	1	1007,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	135628788	135634681	chr6:135628788-135634681	3	-	135628788	135628788	8553170	3	268,477,194,	0,1168,5699,
#Partially deleted in new
chr6	135629404	135630268	chr6:135629404-135630268	0	-	135629404	135629404	8553170	2	219,312,	0,552,
#Partially deleted in new
chr6	135636085	135636713	chr6:135636085-135636713	7	-	135636085	135636085	16724991	1	628,	0,
#Partially deleted in new
chr6	135672313	135716055	chr6:135672313-135716055	0	+	135672313	135672313	8553170	3	116,114,234,	0,17309,43508,
#Partially deleted in new
chr6	135807147	135808466	chr6:135807147-135808466	3	-	135807147	135807147	8553170	2	171,606,	0,713,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	135851695	136195574	chr6:135851695-136195574	3	+	135851998	136191840	0	13	324,61,84,152,64,96,101,132,92,145,97,81,3961,	0,95768,257035,295655,297391,299464,302379,303931,322101,327301,329531,335340,339918,
#Partially deleted in new
chr6	135991935	136070296	chr6:135991935-136070296	1	-	135991935	135991935	8553170	4	54,81,83,73,	0,1121,20695,78288,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	136034030	136094828	chr6:136034030-136094828	1	-	136034030	136034030	8553170	5	1265,108,101,220,187,	0,36193,37164,59997,60611,
#Deleted in new
chr6	136034552	136034886	chr6:136034552-136034886	7	-	136034552	136034552	16724991	1	334,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	136038290	136195565	chr6:136038290-136195565	1	+	136038290	136191840	789624	12	238,84,152,64,96,101,132,92,145,97,81,3952,	0,70440,109060,110796,112869,115784,117336,135506,140706,142936,148745,153323,
#Partially deleted in new
chr6	136043851	136072827	chr6:136043851-136072827	1	-	136043851	136043851	789624	4	1082,108,101,279,	0,26372,27343,28697,
#Partially deleted in new
chr6	136044463	136064638	chr6:136044463-136064638	1	-	136044463	136044463	8553170	3	464,176,258,	0,2845,19917,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	136046262	136094186	chr6:136046262-136094186	0	-	136046262	136046262	8553170	5	115,176,108,101,159,	0,1046,23961,24932,47765,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	136049016	136094200	chr6:136049016-136094200	1	-	136049016	136049016	8553170	4	429,108,101,173,	0,21207,22178,45011,
#Deleted in new
chr6	136096176	136098043	chr6:136096176-136098043	0	-	136096176	136096176	8553170	2	112,46,	0,1821,
#Deleted in new
chr6	136111040	136114949	chr6:136111040-136114949	0	-	136111040	136111040	8553170	2	61,130,	0,3779,
#Deleted in new
chr6	136111053	136112614	chr6:136111053-136112614	0	-	136111053	136111053	8553170	2	48,122,	0,1439,
#Partially deleted in new
chr6	136149085	136156075	chr6:136149085-136156075	0	+	136149085	136155965	789624	4	65,96,101,449,	0,2074,4989,6541,
#Partially deleted in new
chr6	136206477	136206860	chr6:136206477-136206860	7	+	136206477	136206477	16724991	1	383,	0,
#Partially deleted in new
chr6	136231023	136250324	chr6:136231023-136250324	3	-	136231274	136249099	789624	8	365,175,355,233,113,105,117,61,	0,2301,8442,10420,11837,13741,18013,19240,
#Partially deleted in new
chr6	136231029	136250292	chr6:136231029-136250292	0	-	136247488	136249099	789624	9	359,175,355,233,113,105,100,117,29,	0,2295,8436,10414,11831,13735,16431,18007,19234,
#Partially deleted in new
chr6	136231029	136250311	chr6:136231029-136250311	1	-	136231274	136249099	789624	8	359,175,355,233,113,105,117,336,	0,2295,8436,10414,11831,13735,18007,18946,
#Partially deleted in new
chr6	136233143	136239546	chr6:136233143-136239546	0	-	136233234	136239546	789624	2	356,81,	0,6322,
#Partially deleted in new
chr6	136239469	136250294	chr6:136239469-136250294	0	-	136239469	136244803	789624	5	351,233,113,105,31,	0,1974,3391,5295,10794,
#Partially deleted in new
chr6	136247461	136250299	chr6:136247461-136250299	0	-	136247461	136247461	8553170	3	99,117,324,	0,1575,2514,
#Partially deleted in new
chr6	136248690	136250335	chr6:136248690-136250335	0	-	136248690	136248690	8553170	2	463,72,	0,1573,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr6	136256626	136289847	chr6:136256626-136289847	0	-	136269604	136279866	789624	15	4489,213,147,178,163,176,61,85,106,170,666,912,114,104,135,	0,4638,10402,11535,12514,12810,13696,15368,16455,18905,19216,21238,23136,25957,33086,
#Partially deleted in new
chr6	136256862	136289851	chr6:136256862-136289851	1	-	136261109	136279866	789624	12	4253,213,178,176,85,106,170,666,906,114,104,139,	0,4402,11299,12574,15132,16219,18669,18980,21002,22900,25721,32850,
#Partially deleted in new
chr6	136256862	136289851	chr6:136256862-136289851	3	-	136261109	136279866	789624	13	4253,213,147,178,176,85,106,170,666,912,114,104,139,	0,4402,10166,11299,12574,15132,16219,18669,18980,21002,22900,25721,32850,
#Partially deleted in new
chr6	136258293	136268322	chr6:136258293-136268322	0	-	136261109	136268322	789624	4	232,86,213,161,	0,2736,2971,9868,
#Partially deleted in new
chr6	136258585	136289829	chr6:136258585-136289829	1	-	136261109	136279866	789624	12	2530,213,178,176,85,106,170,666,912,114,104,117,	0,2679,9576,10851,13409,14496,16946,17257,19279,21177,23998,31127,
#Partially deleted in new
chr6	136258592	136289795	chr6:136258592-136289795	0	-	136269263	136279866	789624	14	2523,213,147,178,163,176,85,106,170,666,912,114,104,83,	0,2672,8436,9569,10548,10844,13402,14489,16939,17250,19272,21170,23991,31120,
#Partially deleted in new
chr6	136259350	136289781	chr6:136259350-136289781	1	-	136261109	136279866	789624	13	1765,213,147,178,176,85,106,170,147,912,114,104,69,	0,1914,7678,8811,10086,12644,13731,16181,16492,18514,20412,23233,30362,
#Partially deleted in new
chr6	136259690	136289795	chr6:136259690-136289795	1	-	136261109	136279866	789624	13	1425,213,147,178,176,85,106,170,666,906,114,104,83,	0,1574,7338,8471,9746,12304,13391,15841,16152,18174,20072,22893,30022,
#Partially deleted in new
chr6	136259695	136289795	chr6:136259695-136289795	0	-	136274112	136279866	789624	15	1420,213,147,178,163,176,85,106,227,170,147,906,114,104,83,	0,1569,7333,8466,9445,9741,12299,13386,14267,15836,16147,18169,20067,22888,30017,
#Partially deleted in new
chr6	136260745	136268671	chr6:136260745-136268671	0	-	136260745	136260745	8553170	3	370,213,510,	0,519,7416,
#Partially deleted in new
chr6	136260894	136289841	chr6:136260894-136289841	0	-	136269263	136279866	789624	13	221,213,178,163,176,85,106,170,666,912,114,104,129,	0,370,7267,8246,8542,11100,12187,14637,14948,16970,18868,21689,28818,
#Partially deleted in new
chr6	136260901	136289784	chr6:136260901-136289784	0	-	136269263	136279866	789624	13	214,213,178,163,176,85,106,170,666,906,114,104,72,	0,363,7260,8239,8535,11093,12180,14630,14941,16963,18861,21682,28811,
#Partially deleted in new
chr6	136260927	136269520	chr6:136260927-136269520	0	-	136261109	136269520	789624	5	188,213,147,112,84,	0,337,6101,7234,8509,
#Partially deleted in new
chr6	136261003	136269959	chr6:136261003-136269959	0	-	136261003	136261003	8553170	6	112,213,147,178,163,523,	0,261,6025,7158,8137,8433,
#Partially deleted in new
chr6	136261109	136279866	chr6:136261109-136279866	1	-	136261109	136279866	789624	10	6,213,178,176,85,106,170,666,906,104,	0,155,7052,8327,10885,11972,14422,14733,16755,18653,
#Partially deleted in new
chr6	136261300	136268409	chr6:136261300-136268409	0	-	136261300	136261300	8553170	3	177,147,248,	0,5728,6861,
#Deleted in new
chr6	136269088	136269740	chr6:136269088-136269740	0	-	136269088	136269088	8553170	2	215,304,	0,348,
#Deleted in new
chr6	136269230	136273166	chr6:136269230-136273166	0	-	136269230	136269230	8553170	3	382,85,85,	0,2764,3851,
#Deleted in new
chr6	136269261	136273144	chr6:136269261-136273144	0	-	136269261	136269261	8553170	4	351,61,85,63,	0,1061,2733,3820,
#Partially deleted in new
chr6	136269263	136289851	chr6:136269263-136289851	1	-	136269263	136279866	789624	10	40,176,85,106,170,666,912,114,104,139,	0,173,2731,3818,6268,6579,8601,10499,13320,20449,
#Partially deleted in new
chr6	136269475	136289844	chr6:136269475-136289844	0	-	136269475	136279866	789624	9	137,82,106,170,666,912,114,104,132,	0,2519,3606,6056,6367,8389,10287,13108,20237,
#Deleted in new
chr6	136271918	136273550	chr6:136271918-136273550	0	-	136271918	136271918	8553170	2	161,469,	0,1163,
#Partially deleted in new
chr6	136275554	136278103	chr6:136275554-136278103	0	-	136275912	136278103	789624	4	147,147,41,239,	0,288,913,2310,
#Partially deleted in new
chr6	136279482	136289787	chr6:136279482-136289787	0	-	136279482	136279482	8553170	3	394,104,75,	0,3101,10230,
#Deleted in new
chr6	136317960	136318236	chr6:136317960-136318236	7	+	136317960	136317960	16724991	1	276,	0,
#Deleted in new
chr6	136335713	136336087	chr6:136335713-136336087	3	-	136335713	136335713	8553170	1	374,	0,
#Partially deleted in new
chr6	136342280	136526606	chr6:136342280-136526606	1	-	136344227	136388480	789624	18	1958,224,103,58,51,102,175,253,284,113,125,114,111,118,164,78,99,245,	0,3575,14411,17539,17700,18416,18724,20169,23454,24046,30220,35474,41390,46112,47073,69339,79420,184081,
#Partially deleted in new
chr6	136342280	136550819	chr6:136342280-136550819	1	-	136344227	136550408	789624	16	1958,224,103,58,51,102,175,253,284,113,125,114,111,78,99,478,	0,3575,14411,17539,17700,18416,18724,20169,23454,24046,30220,35474,41390,69339,79420,208061,
#Partially deleted in new
chr6	136342280	136526213	chr6:136342280-136526213	1	-	136344227	136525964	789624	18	1958,224,103,58,51,102,175,253,284,113,149,114,111,118,164,78,99,382,	0,3575,14411,17539,17700,18416,18724,20169,23454,24046,30220,35474,41390,46112,47073,69339,79420,183551,
#Partially deleted in new
chr6	136342280	136550819	chr6:136342280-136550819	1	-	136344227	136550408	789624	17	1958,224,103,58,51,102,175,253,284,113,125,114,118,164,78,99,478,	0,3575,14411,17539,17700,18416,18724,20169,23454,24046,30220,35474,46112,47073,69339,79420,208061,
#Partially deleted in new
chr6	136342736	136550819	chr6:136342736-136550819	3	-	136344227	136550408	789624	18	1502,224,103,58,51,102,175,253,284,113,125,114,111,118,164,78,99,478,	0,3119,13955,17083,17244,17960,18268,19713,22998,23590,29764,35018,40934,45656,46617,68883,78964,207605,
#Partially deleted in new
chr6	136343542	136526472	chr6:136343542-136526472	1	-	136344227	136525964	789624	19	696,224,103,58,51,102,175,253,284,113,125,114,111,118,164,78,99,140,111,	0,2313,13149,16277,16438,17154,17462,18907,22192,22784,28958,34212,40128,44850,45811,68077,78158,182289,182819,
#Partially deleted in new
chr6	136343781	136466875	chr6:136343781-136466875	1	-	136344227	136466782	789624	18	457,224,103,58,51,102,175,253,284,113,125,114,111,118,164,78,99,115,	0,2074,12910,16038,16199,16915,17223,18668,21953,22545,28719,33973,39889,44611,45572,67838,77919,122979,
#Partially deleted in new
chr6	136343818	136525983	chr6:136343818-136525983	1	-	136344227	136525964	789624	17	420,224,103,58,51,102,175,253,284,113,125,114,118,164,78,99,152,	0,2037,12873,16001,16162,16878,17186,18631,21916,22508,28682,33936,44574,45535,67801,77882,182013,
#Partially deleted in new
chr6	136343839	136526660	chr6:136343839-136526660	1	-	136344227	136388480	789624	15	399,224,103,58,51,102,175,253,284,113,125,114,111,137,68,	0,2016,12852,15980,16141,16857,17165,18610,21895,22487,28661,33915,39831,44553,182753,
#Deleted in new
chr6	136364128	136364462	chr6:136364128-136364462	5	+	136364128	136364128	16724991	1	334,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	136364418	136365079	chr6:136364418-136365079	7	+	136364418	136364418	16724991	2	142,401,	0,260,
#Deleted in new
chr6	136419846	136420425	chr6:136419846-136420425	7	-	136419846	136419846	16724991	1	579,	0,
#Deleted in new
chr6	136475861	136476150	chr6:136475861-136476150	7	-	136475861	136475861	16724991	1	289,	0,
#Deleted in new
chr6	136545191	136545492	chr6:136545191-136545492	3	+	136545191	136545191	8553170	1	301,	0,
#Deleted in new
chr6	136550660	136552554	chr6:136550660-136552554	3	+	136550660	136550660	8553170	1	1894,	0,
#Partially deleted in new
chr6	136557046	136792518	chr6:136557046-136792518	3	-	136557757	136792157	0	30	772,77,113,113,244,106,186,169,178,21,178,158,106,137,128,134,82,96,50,108,154,160,113,171,107,169,194,24,140,809,	0,1753,4486,5456,10584,23254,26508,35126,35390,43975,44755,48162,54235,56073,57112,65801,80278,82496,85473,93937,99260,102172,112236,137093,138904,140172,141442,148063,163403,234663,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	136580333	136584507	chr6:136580333-136584507	0	-	136580333	136580333	8553170	3	73,186,106,	0,3221,4068,
#Partially deleted in new
chr6	136629171	136647999	chr6:136629171-136647999	3	+	136629171	136629171	789624	3	105,172,228,	0,7759,18600,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	136630242	136630355	chr6:136630242-136630355	7	+	136630242	136630242	16724991	1	113,	0,
#Partially deleted in new
chr6	136822578	136830260	chr6:136822578-136830260	1	+	136822665	136830036	789624	4	217,58,151,254,	0,2635,3740,7428,
#Partially deleted in new
chr6	136822584	136913937	chr6:136822584-136913937	3	+	136822665	136913526	789624	10	211,58,151,78,109,107,114,56,100,480,	0,2629,3734,23030,23488,44042,47305,49613,75557,90873,
#Deleted in new
chr6	136855697	136855831	chr6:136855697-136855831	3	-	136855697	136855697	8553170	1	134,	0,
#Deleted in new
chr6	136900232	136901529	chr6:136900232-136901529	7	-	136900232	136900232	16724991	1	1297,	0,
#Deleted in new
chr6	136900377	136901157	chr6:136900377-136901157	5	-	136900377	136900377	16724991	1	780,	0,
#Deleted in new
chr6	136922263	136925639	chr6:136922263-136925639	3	+	136922428	136924696	789624	2	604,1755,	0,1621,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	136934764	136934866	chr6:136934764-136934866	3	+	136934764	136934764	8553170	1	102,	0,
#Deleted in new
chr6	136973929	136974217	chr6:136973929-136974217	7	-	136973929	136973929	16724991	1	288,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	136982164	136993234	chr6:136982164-136993234	0	-	136982164	136982164	8553170	3	989,299,61,	0,7897,11009,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	136982164	136993234	chr6:136982164-136993234	3	-	136982164	136982164	5263520	3	989,307,61,	0,7889,11009,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	136995169	136999504	chr6:136995169-136999504	3	+	136995169	136995169	8553170	2	99,285,	0,4050,
#Partially deleted in new
chr6	136999970	137044964	chr6:136999970-137044964	3	-	137001557	137044728	0	7	2385,140,145,176,179,136,324,	0,4650,8628,9346,11303,16997,44670,
#Partially deleted in new
chr6	136999970	137045180	chr6:136999970-137045180	1	-	137001557	137017037	0	6	2385,140,145,176,136,540,	0,4650,8628,9346,16997,44670,
#Partially deleted in new
chr6	136999970	137044312	chr6:136999970-137044312	1	-	137001557	137017044	0	7	2385,140,145,176,179,136,221,	0,4650,8628,9346,11303,16997,44121,
#Partially deleted in new
chr6	137004620	137044964	chr6:137004620-137044964	0	-	137004620	137017037	789624	5	140,145,176,136,324,	0,3978,4696,12347,40020,
#Partially deleted in new
chr6	137008655	137044278	chr6:137008655-137044278	0	-	137008655	137017037	789624	4	88,110,136,187,	0,661,8312,35436,
#Partially deleted in new
chr6	137008887	137044964	chr6:137008887-137044964	1	-	137009265	137044728	789624	4	605,179,136,324,	0,2386,8080,35753,
#Partially deleted in new
chr6	137037926	137044248	chr6:137037926-137044248	0	-	137037926	137037926	8553170	2	205,157,	0,6165,
#Partially deleted in new
chr6	137037974	137044964	chr6:137037974-137044964	0	-	137042917	137044728	789624	3	157,174,324,	0,4810,6666,
#Partially deleted in new
chr6	137143819	137173648	chr6:137143819-137173648	3	-	137145623	137161749	0	6	1954,170,179,136,126,236,	0,3902,11121,14527,17869,29593,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	137143830	137173648	chr6:137143830-137173648	1	-	137145623	137161749	0	7	1943,170,179,96,136,126,236,	0,3891,11110,12928,14516,17858,29582,
#Partially deleted in new
chr6	137143830	137173648	chr6:137143830-137173648	1	-	137145756	137161749	0	5	1943,179,136,126,236,	0,11110,14516,17858,29582,
#Partially deleted in new
chr6	137197483	137219449	chr6:137197483-137219449	3	-	137198030	137219327	0	7	1156,128,187,173,173,115,207,	0,3397,6015,6848,8652,9479,21759,
#Partially deleted in new
chr6	137197484	137219312	chr6:137197484-137219312	0	-	137209961	137219312	789624	8	1155,128,187,173,173,115,135,70,	0,3396,6014,6847,8651,9478,12365,21758,
#Partially deleted in new
chr6	137197484	137219313	chr6:137197484-137219313	0	-	137209961	137219313	789624	8	1155,128,187,173,173,115,123,71,	0,3396,6014,6847,8651,9478,12365,21758,
#Partially deleted in new
chr6	137197496	137219064	chr6:137197496-137219064	1	-	137198030	137209877	789624	8	1143,128,187,173,173,115,123,81,	0,3384,6002,6835,8639,9466,12353,21487,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	137197496	137219244	chr6:137197496-137219244	1	-	137198030	137207039	789624	7	1143,128,187,173,173,115,573,	0,3384,6002,6835,8639,9466,21175,
#Partially deleted in new
chr6	137197496	137219122	chr6:137197496-137219122	1	-	137198030	137207039	789624	7	1143,128,187,173,173,115,29,	0,3384,6002,6835,8639,9466,21597,
#Partially deleted in new
chr6	137197496	137219136	chr6:137197496-137219136	1	-	137198030	137215321	789624	8	1143,128,187,173,173,115,111,153,	0,3384,6002,6835,8639,9466,17770,21487,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	137197496	137219160	chr6:137197496-137219160	1	-	137198030	137215321	789624	8	1143,128,187,173,173,115,111,489,	0,3384,6002,6835,8639,9466,17770,21175,
#Partially deleted in new
chr6	137197496	137219028	chr6:137197496-137219028	1	-	137198030	137207039	789624	7	1143,128,187,173,173,115,45,	0,3384,6002,6835,8639,9466,21487,
#Partially deleted in new
chr6	137203498	137219449	chr6:137203498-137219449	0	-	137203498	137219327	789624	5	187,173,71,115,207,	0,833,2637,3464,15744,
#Partially deleted in new
chr6	137204362	137219449	chr6:137204362-137219449	0	-	137204362	137215321	789624	5	142,173,115,111,207,	0,1773,2600,10904,14880,
#Partially deleted in new
chr6	137206641	137219449	chr6:137206641-137219449	0	-	137206641	137206641	8553170	2	436,207,	0,12601,
#Deleted in new
chr6	137492201	137494250	chr6:137492201-137494250	3	-	137493351	137494170	789624	1	2049,	0,
#Deleted in new
chr6	137543896	137544372	chr6:137543896-137544372	7	-	137543896	137543896	16724991	1	476,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	137657997	137674554	chr6:137657997-137674554	1	+	137657997	137657997	8553170	7	38,133,94,160,79,180,167,	0,4158,7648,8631,14022,15947,16390,
#Partially deleted in new
chr6	137673377	137689908	chr6:137673377-137689908	0	+	137673377	137673377	8553170	5	258,180,130,57,352,	0,567,13716,15255,16179,
#Partially deleted in new
chr6	137673382	137763984	chr6:137673382-137763984	2	+	137673382	137673382	8553170	3	253,180,168,	0,562,90434,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	137673401	137717276	chr6:137673401-137717276	1	+	137673401	137673401	8553170	5	234,180,130,57,496,	0,543,13692,15231,43379,
#Deleted in new
chr6	137673459	137674554	chr6:137673459-137674554	0	+	137673459	137673459	8553170	3	176,180,167,	0,485,928,
#Deleted in new
chr6	137705422	137707201	chr6:137705422-137707201	7	-	137705422	137705422	16724991	1	1779,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	137730169	137738983	chr6:137730169-137738983	1	-	137730169	137730169	789624	3	428,34,275,	0,1042,8539,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	137730169	137738983	chr6:137730169-137738983	0	-	137730169	137730169	789624	2	428,275,	0,8539,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	137730169	137792835	chr6:137730169-137792835	3	-	137730169	137730169	8553170	3	428,125,88,	0,54562,62578,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	137784373	137784486	chr6:137784373-137784486	3	+	137784373	137784373	8553170	1	113,	0,
#Deleted in new
chr6	137823672	137825894	chr6:137823672-137825894	1	-	137823672	137823672	8553170	2	905,120,	0,2102,
#Partially deleted in new
chr6	137823674	137868233	chr6:137823674-137868233	3	-	137823674	137823674	789624	4	903,162,302,592,	0,41484,42908,43967,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	137854861	137858048	chr6:137854861-137858048	0	-	137854861	137854861	8553170	2	624,322,	0,2865,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	137857285	137867704	chr6:137857285-137867704	1	-	137857285	137857285	8553170	4	760,30,110,63,	0,3696,5530,10356,
#Partially deleted in new
chr6	137857592	137867704	chr6:137857592-137867704	0	-	137857592	137857592	8553170	4	453,30,110,63,	0,3389,5223,10049,
#Partially deleted in new
chr6	137857699	137861491	chr6:137857699-137861491	0	-	137857699	137857699	8553170	2	267,510,	0,3282,
#Partially deleted in new
chr6	137867187	137883311	chr6:137867187-137883311	3	+	137871227	137881319	0	9	355,310,191,148,171,181,920,182,2277,	0,4025,7657,8500,8808,9888,11244,12883,13847,
#Partially deleted in new
chr6	137867213	137871304	chr6:137867213-137871304	0	+	137871227	137871304	789624	2	329,92,	0,3999,
#Partially deleted in new
chr6	137867321	137875035	chr6:137867321-137875035	0	+	137871227	137875035	789624	3	197,310,191,	0,3891,7523,
#Partially deleted in new
chr6	137867443	137883312	chr6:137867443-137883312	1	+	137871227	137881319	0	9	51,310,191,148,171,181,920,182,2278,	0,3769,7401,8244,8552,9632,10988,12627,13591,
#Partially deleted in new
chr6	137867581	137871522	chr6:137867581-137871522	0	+	137871227	137871522	789624	2	155,310,	0,3631,
#Partially deleted in new
chr6	137871210	137878860	chr6:137871210-137878860	1	+	137871227	137878860	789624	7	312,191,148,171,181,382,45,	0,3634,4477,4785,5865,7221,7605,
#Partially deleted in new
chr6	137871210	137882748	chr6:137871210-137882748	1	+	137871227	137876007	789624	9	312,191,33,114,171,181,920,182,1714,	0,3634,4477,4511,4785,5865,7221,8860,9824,
#Partially deleted in new
chr6	137871210	137881198	chr6:137871210-137881198	1	+	137871227	137881198	789624	9	312,191,148,171,181,920,182,126,36,	0,3634,4477,4785,5865,7221,8860,9824,9952,
#Partially deleted in new
chr6	137871210	137882748	chr6:137871210-137882748	1	+	137871227	137880176	789624	9	312,191,148,171,181,892,26,182,1714,	0,3634,4477,4785,5865,7221,8115,8860,9824,
#Partially deleted in new
chr6	137871210	137879043	chr6:137871210-137879043	1	+	137871227	137879043	789624	7	312,191,148,171,181,526,84,	0,3634,4477,4785,5865,7221,7749,
#Partially deleted in new
chr6	137875837	137878525	chr6:137875837-137878525	0	+	137875837	137875837	8553170	3	329,181,94,	0,1238,2594,
#Partially deleted in new
chr6	137943078	137945802	chr6:137943078-137945802	3	-	137943078	137943078	789624	2	439,134,	0,2590,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	137945365	137972522	chr6:137945365-137972522	3	+	137945365	137945365	8553170	2	101,280,	0,26877,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	137945365	137951574	chr6:137945365-137951574	1	+	137945365	137945365	8553170	2	101,434,	0,5775,
#Deleted in new
chr6	137995269	137996147	chr6:137995269-137996147	7	+	137995269	137995269	16724991	1	878,	0,
#Partially deleted in new
chr6	138088504	138107511	chr6:138088504-138107511	3	-	138092041	138107340	789624	3	3764,141,385,	0,7849,18622,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr6	138161920	138344663	chr6:138161920-138344663	3	+	138162086	138336486	789624	34	251,52,82,132,69,123,43,79,105,334,113,911,167,166,108,216,111,151,321,134,146,180,145,123,104,145,129,177,115,103,132,122,1219,8369,	0,8741,45121,47989,67863,76588,81031,83592,91959,93515,99606,100780,116530,118078,124025,124780,125153,127897,129812,132072,134889,136685,145332,146818,149486,151874,155330,157782,159190,161750,162102,166100,172049,174374,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	138215985	138218491	chr6:138215985-138218491	3	-	138217987	138218395	789624	1	2506,	0,
#Partially deleted in new
chr6	138377904	138383075	chr6:138377904-138383075	3	+	138378072	138382847	789624	2	279,576,	0,4595,
#Deleted in new
chr6	138393372	138393544	chr6:138393372-138393544	7	+	138393372	138393372	16724991	1	172,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	138402584	138403560	chr6:138402584-138403560	7	-	138402584	138402584	16724991	1	976,	0,
#Partially deleted in new
chr6	138403530	138413173	chr6:138403530-138413173	1	+	138403563	138412929	789624	4	168,136,63,294,	0,1614,2440,9349,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	138404218	138422197	chr6:138404218-138422197	3	+	138404495	138413078	0	4	379,136,181,9318,	0,926,1752,8661,
#Partially deleted in new
chr6	138404246	138413173	chr6:138404246-138413173	1	+	138404495	138412929	789624	4	351,136,63,294,	0,898,1724,8633,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	138405970	138413154	chr6:138405970-138413154	0	+	138405970	138412156	789624	3	63,174,275,	0,6112,6909,
#Partially deleted in new
chr6	138422042	138572540	chr6:138422042-138572540	1	-	138424080	138571911	789624	7	2774,133,3288,193,128,153,831,	0,7668,8350,24958,51263,74176,149667,
#Partially deleted in new
chr6	138422570	138499494	chr6:138422570-138499494	1	-	138424080	138499290	789624	8	2246,133,3288,132,193,128,153,262,	0,7140,7822,19412,24430,50735,73648,76662,
#Partially deleted in new
chr6	138433507	138545711	chr6:138433507-138545711	0	-	138433507	138545638	789624	5	173,193,128,153,89,	0,13493,39798,62711,112115,
#Deleted in new
chr6	138435212	138435294	chr6:138435212-138435294	3	-	138435212	138435212	5263520	1	82,	0,
#Partially deleted in new
chr6	138446789	138499494	chr6:138446789-138499494	0	-	138446789	138446789	8553170	4	404,128,153,262,	0,26516,49429,52443,
#Partially deleted in new
chr6	138447064	138692571	chr6:138447064-138692571	0	-	138447064	138692571	789624	4	129,128,153,96,	0,26241,49154,245411,
#Partially deleted in new
chr6	138447123	138512495	chr6:138447123-138512495	0	-	138447123	138512339	789624	4	70,128,153,217,	0,26182,49095,65155,
#Deleted in new
chr6	138464098	138464383	chr6:138464098-138464383	7	+	138464098	138464098	16724991	1	285,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	138470540	138499368	chr6:138470540-138499368	0	-	138470540	138470540	8553170	4	54,128,153,136,	0,2765,25678,28692,
#Deleted in new
chr6	138571529	138572462	chr6:138571529-138572462	0	-	138571529	138571529	8553170	2	532,77,	0,856,
#Partially deleted in new
chr6	138571698	138692571	chr6:138571698-138692571	2	-	138571698	138571698	8553170	2	363,96,	0,120777,
#Deleted in new
chr6	138650225	138650973	chr6:138650225-138650973	7	-	138650225	138650225	16724991	1	748,	0,
#Partially deleted in new
chr6	138692547	138697288	chr6:138692547-138697288	3	+	138692547	138692547	8553170	3	70,155,692,	0,1845,4049,
#Partially deleted in new
chr6	138694318	138697027	chr6:138694318-138697027	0	+	138694318	138694318	8553170	3	229,159,33,	0,2278,2676,
#Partially deleted in new
chr6	138694389	138697288	chr6:138694389-138697288	0	+	138694389	138694389	789624	3	158,159,386,	0,2207,2513,
#Deleted in new
chr6	138696367	138697288	chr6:138696367-138697288	0	+	138696367	138696367	8553170	2	388,386,	0,535,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	138725210	138773652	chr6:138725210-138773652	0	-	138725210	138725210	8553170	4	2283,142,122,138,	0,24917,39046,48304,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	138727466	138773550	chr6:138727466-138773550	3	-	138727466	138773550	789624	4	27,142,122,36,	0,22661,36790,46048,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	138750127	138773414	chr6:138750127-138773414	0	-	138750127	138750127	8553170	5	142,77,23,122,208,	0,5889,6477,14129,23079,
#Partially deleted in new
chr6	138773508	138793317	chr6:138773508-138793317	3	+	138773674	138792803	789624	6	394,200,164,155,23,569,	0,2570,6313,11718,14857,19240,
#Partially deleted in new
chr6	138773519	138793319	chr6:138773519-138793319	1	+	138773674	138792803	789624	6	383,200,164,155,23,571,	0,2559,6302,11707,14846,19229,
#Partially deleted in new
chr6	138773768	138793312	chr6:138773768-138793312	1	+	138776120	138792803	789624	6	134,200,164,155,23,564,	0,2310,6053,11458,14597,18980,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr6	138795925	138904070	chr6:138795925-138904070	3	+	138813274	138902627	789624	21	58,169,113,163,253,169,139,166,129,93,183,104,87,215,148,74,157,66,89,173,1571,	0,17246,18565,42426,47053,48486,50613,53343,58100,66701,69070,72177,80546,85031,86798,89580,89748,90931,93017,105022,106574,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr6	138796110	138904070	chr6:138796110-138904070	1	+	138813274	138902627	789624	21	82,169,113,163,253,169,139,166,129,93,183,104,87,215,148,74,157,66,89,173,1571,	0,17061,18380,42241,46868,48301,50428,53158,57915,66516,68885,71992,80361,84846,86613,89395,89563,90746,92832,104837,106389,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr6	138796110	138904070	chr6:138796110-138904070	1	+	138813274	138902627	789624	22	82,140,169,113,163,253,169,139,166,129,93,183,104,87,215,148,74,157,66,89,173,1571,	0,16727,17061,18380,42241,46868,48301,50428,53158,57915,66516,68885,71992,80361,84846,86613,89395,89563,90746,92832,104837,106389,
#Partially deleted in new
chr6	138796119	138838404	chr6:138796119-138838404	0	+	138813274	138838404	789624	5	73,140,169,113,53,	0,16718,17052,18371,42232,
#Deleted in new
chr6	138822746	138823799	chr6:138822746-138823799	7	+	138822746	138822746	16724991	1	1053,	0,
#Partially deleted in new
chr6	138849377	138870275	chr6:138849377-138870275	0	+	138849377	138849377	8553170	6	57,129,93,183,104,83,	0,4648,13249,15618,18725,20815,
#Deleted in new
chr6	138878898	138879407	chr6:138878898-138879407	7	-	138878898	138878898	16724991	1	509,	0,
#Deleted in new
chr6	138879042	138879319	chr6:138879042-138879319	5	-	138879042	138879042	16724991	1	277,	0,
#Partially deleted in new
chr6	138903492	138988257	chr6:138903492-138988257	1	-	138905063	138987682	789624	20	1640,106,149,96,186,65,119,73,102,88,81,122,155,64,163,125,154,197,124,728,	0,4002,5175,7783,9272,11204,12365,14062,16722,17544,22908,26484,37842,40020,40360,41005,41726,42008,44297,84037,
#Partially deleted in new
chr6	138904016	138988261	chr6:138904016-138988261	1	-	138941454	138987682	789624	17	1116,106,149,96,186,65,119,73,102,88,81,122,155,154,197,124,732,	0,3478,4651,7259,8748,10680,11841,13538,16198,17020,22384,25960,37318,41202,41484,43773,83513,
#Partially deleted in new
chr6	138904859	138987775	chr6:138904859-138987775	1	-	138905063	138987682	789624	19	273,106,149,96,186,65,119,73,102,88,122,155,64,163,125,154,197,124,246,	0,2635,3808,6416,7905,9837,10998,12695,15355,16177,25117,36475,38653,38993,39638,40359,40641,42930,82670,
#Partially deleted in new
chr6	138904860	138988211	chr6:138904860-138988211	0	-	138941454	138987682	789624	16	272,106,149,96,186,65,119,73,102,88,122,155,154,197,124,682,	0,2634,3807,6415,7904,9836,10997,12694,15354,16176,25116,36474,40358,40640,42929,82669,
#Partially deleted in new
chr6	138904860	138987640	chr6:138904860-138987640	0	-	138905063	138987640	789624	19	272,106,149,96,186,65,119,70,102,88,122,155,64,163,125,154,197,124,111,	0,2634,3807,6415,7904,9836,10997,12694,15354,16176,25116,36474,38652,38992,39637,40358,40640,42929,82669,
#Partially deleted in new
chr6	138904865	138912871	chr6:138904865-138912871	0	-	138905026	138912871	789624	4	267,149,96,107,	0,3802,6410,7899,
#Partially deleted in new
chr6	138904866	138988001	chr6:138904866-138988001	0	-	138941454	138987682	789624	16	266,106,149,96,186,65,119,92,102,88,3698,155,154,197,124,472,	0,2628,3801,6409,7898,9830,10991,12688,15348,16170,21534,36468,40352,40634,42923,82663,
#Partially deleted in new
chr6	138904869	138988261	chr6:138904869-138988261	3	-	138905063	138987682	789624	20	263,106,149,96,186,65,119,70,102,88,81,122,155,64,163,125,154,197,124,732,	0,2625,3798,6406,7895,9827,10988,12685,15345,16167,21531,25107,36465,38643,38983,39628,40349,40631,42920,82660,
#Partially deleted in new
chr6	138904869	138987881	chr6:138904869-138987881	1	-	138905063	138987682	789624	17	263,106,149,96,186,65,102,88,122,155,64,163,125,154,197,124,352,	0,2625,3798,6406,7895,9827,15345,16167,25107,36465,38643,38983,39628,40349,40631,42920,82660,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	138904869	138916214	chr6:138904869-138916214	0	-	138904869	138904869	8553170	7	263,106,149,96,276,65,357,	0,2625,3798,6406,7805,9827,10988,
#Partially deleted in new
chr6	138904891	138987720	chr6:138904891-138987720	1	-	138905063	138987682	789624	18	241,106,149,186,65,119,73,102,88,122,155,64,163,125,154,197,124,191,	0,2603,3776,7873,9805,10966,12663,15323,16145,25085,36443,38621,38961,39606,40327,40609,42898,82638,
#Partially deleted in new
chr6	138907371	138908737	chr6:138907371-138908737	0	-	138907485	138908737	789624	2	229,70,	0,1296,
#Partially deleted in new
chr6	138907534	138908912	chr6:138907534-138908912	0	-	138907534	138907534	8553170	2	66,245,	0,1133,
#Partially deleted in new
chr6	138908794	138915187	chr6:138908794-138915187	0	-	138908794	138908794	8553170	4	22,96,186,491,	0,2481,3970,5902,
#Deleted in new
chr6	138910922	138912837	chr6:138910922-138912837	0	-	138910922	138910922	8553170	2	449,73,	0,1842,
#Partially deleted in new
chr6	138911245	138914884	chr6:138911245-138914884	0	-	138911245	138911245	8553170	3	126,186,188,	0,1519,3451,
#Partially deleted in new
chr6	138912865	138929997	chr6:138912865-138929997	0	-	138912865	138929997	789624	6	85,65,102,88,78,21,	0,1831,7349,8171,13535,17111,
#Partially deleted in new
chr6	138920301	138944545	chr6:138920301-138944545	0	-	138934312	138944545	789624	9	15,88,81,122,102,155,64,163,48,	0,735,6099,9675,13923,21033,23211,23551,24196,
#Partially deleted in new
chr6	138921063	138943926	chr6:138921063-138943926	0	-	138934312	138943926	789624	6	61,122,102,155,64,74,	0,8913,13161,20271,22449,22789,
#Partially deleted in new
chr6	138934288	138945260	chr6:138934288-138945260	0	-	138941454	138945260	789624	5	38,155,163,125,42,	0,7046,9564,10209,10930,
#Partially deleted in new
chr6	139028681	139043302	chr6:139028681-139043302	3	+	139034160	139042903	0	3	194,67,584,	0,5473,14037,
#Partially deleted in new
chr6	139028841	139034576	chr6:139028841-139034576	1	+	139034160	139034364	789624	2	34,422,	0,5313,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	139135111	139180802	chr6:139135111-139180802	3	+	139135396	139177105	789624	4	556,1041,155,3862,	0,31172,39273,41829,
#Partially deleted in new
chr6	139144203	139239305	chr6:139144203-139239305	0	-	139144203	139144203	8553170	3	411,165,220,	0,26196,94882,
#Partially deleted in new
chr6	139144390	139239305	chr6:139144390-139239305	2	-	139144390	139144390	8553170	4	224,195,165,220,	0,6690,26009,94695,
#Partially deleted in new
chr6	139144476	139239305	chr6:139144476-139239305	0	-	139144476	139144476	8553170	4	138,165,109,220,	0,25923,57198,94609,
#Partially deleted in new
chr6	139153009	139239305	chr6:139153009-139239305	0	-	139153009	139153009	8553170	4	226,153,165,220,	0,2590,17390,86076,
#Partially deleted in new
chr6	139159156	139239305	chr6:139159156-139239305	0	-	139159156	139159156	8553170	4	97,165,109,220,	0,11243,42518,79929,
#Partially deleted in new
chr6	139159156	139245524	chr6:139159156-139245524	0	-	139159156	139159156	8553170	5	97,165,246,96,75,	0,11243,79929,85438,86293,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	139159163	139239305	chr6:139159163-139239305	0	-	139159163	139159163	8553170	4	90,165,126,220,	0,11236,78216,79922,
#Partially deleted in new
chr6	139159164	139239305	chr6:139159164-139239305	0	-	139159164	139159164	8553170	5	89,165,109,61,220,	0,11235,42510,44410,79921,
#Partially deleted in new
chr6	139166026	139239305	chr6:139166026-139239305	0	-	139166026	139166026	8553170	3	444,165,220,	0,4373,73059,
#Partially deleted in new
chr6	139166890	139239169	chr6:139166890-139239169	1	-	139166890	139166890	8553170	3	464,190,84,	0,3484,72195,
#Partially deleted in new
chr6	139169579	139239305	chr6:139169579-139239305	0	-	139169579	139169579	8553170	3	323,165,220,	0,820,69506,
#Partially deleted in new
chr6	139170056	139239305	chr6:139170056-139239305	0	-	139170056	139170056	8553170	2	508,220,	0,69029,
#Partially deleted in new
chr6	139174468	139239305	chr6:139174468-139239305	0	-	139174468	139174468	8553170	2	147,220,	0,64617,
#Partially deleted in new
chr6	139182988	139239305	chr6:139182988-139239305	0	-	139182988	139182988	8553170	2	585,220,	0,56097,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	139197711	139239302	chr6:139197711-139239302	0	-	139197711	139197711	8553170	4	158,109,61,217,	0,3963,5863,41374,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	139199881	139239305	chr6:139199881-139239305	0	-	139199881	139199881	8553170	3	195,109,220,	0,1793,39204,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	139237376	139239653	chr6:139237376-139239653	1	-	139237376	139237376	8553170	2	129,568,	0,1709,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	139239082	139270561	chr6:139239082-139270561	0	-	139239082	139239082	8553170	7	175,93,75,120,195,195,106,	0,8734,16481,21235,23496,29893,31373,
#Partially deleted in new
chr6	139239085	139276848	chr6:139239085-139276848	0	-	139239085	139239085	8553170	8	172,96,93,75,120,195,171,19,	0,5509,8731,16478,21232,23493,31370,37744,
#Partially deleted in new
chr6	139239085	139277181	chr6:139239085-139277181	1	-	139239085	139239085	8553170	9	246,96,93,75,120,195,171,92,100,	0,5509,8731,16478,21232,23493,31370,37744,37996,
#Partially deleted in new
chr6	139239098	139260326	chr6:139239098-139260326	2	-	139239098	139239098	8553170	6	159,96,93,171,75,9,	0,5496,8718,12353,16465,21219,
#Partially deleted in new
chr6	139240060	139292139	chr6:139240060-139292139	3	-	139242525	139288899	789624	10	3254,96,93,75,120,195,171,92,438,219,	0,4534,7756,15503,20257,22518,30395,36769,48415,51860,
#Partially deleted in new
chr6	139255379	139262597	chr6:139255379-139262597	0	-	139255379	139262597	789624	3	259,120,19,	0,4938,7199,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	139271361	139287307	chr6:139271361-139287307	0	+	139271361	139271361	8553170	4	188,200,63,463,	0,297,11742,15483,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	139271361	139507598	chr6:139271361-139507598	3	+	139271361	139271361	8553170	8	188,200,63,58,533,124,112,1135,	0,297,11742,15483,157719,164975,180196,235102,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	139283106	139287307	chr6:139283106-139287307	1	+	139283106	139283106	8553170	3	60,58,298,	0,3738,3903,
#Deleted in new
chr6	139338017	139339580	chr6:139338017-139339580	7	+	139338017	139338017	16724991	2	74,1399,	0,164,
#Deleted in new
chr6	139371806	139374620	chr6:139371806-139374620	3	-	139373131	139373944	0	2	2146,208,	0,2606,
#Deleted in new
chr6	139372254	139374362	chr6:139372254-139374362	1	-	139373131	139373944	0	2	1698,99,	0,2009,
#Deleted in new
chr6	139372254	139374213	chr6:139372254-139374213	1	-	139373131	139374138	789624	2	1698,82,	0,1877,
#Deleted in new
chr6	139373073	139374605	chr6:139373073-139374605	1	-	139373131	139373944	0	3	224,484,193,	0,395,1339,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	139468994	139474596	chr6:139468994-139474596	3	-	139468994	139468994	789624	4	1466,69,124,31,	0,3532,3937,5571,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	139486411	139507598	chr6:139486411-139507598	0	+	139486411	139486411	8553170	2	204,1135,	0,20052,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	139534318	139667284	chr6:139534318-139667284	1	+	139534318	139534318	8553170	12	98,131,134,228,144,62,213,150,151,53,137,187,	0,43189,48987,63684,66167,66524,113661,115279,117545,118231,118627,132779,
#Deleted in new
chr6	139614437	139615204	chr6:139614437-139615204	7	-	139614437	139614437	16724991	1	767,	0,
#Deleted in new
chr6	139659927	139661513	chr6:139659927-139661513	7	+	139659927	139659927	16724991	1	1586,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	139677638	139860475	chr6:139677638-139860475	0	+	139677638	139677638	8553170	3	203,56,1191,	0,179125,181646,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	139677638	139860476	chr6:139677638-139860476	3	+	139677638	139677638	8553170	4	203,51,56,1192,	0,93434,179125,181646,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	139677644	139860476	chr6:139677644-139860476	0	+	139677644	139677644	8553170	4	197,54,56,1192,	0,67741,179119,181640,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	139705619	139860476	chr6:139705619-139860476	0	+	139705619	139705619	789624	4	156,51,56,1192,	0,65453,151144,153665,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	139839686	139860475	chr6:139839686-139860475	0	+	139839686	139839686	8553170	3	72,56,1191,	0,17077,19598,
#Deleted in new
chr6	139854849	139859808	chr6:139854849-139859808	0	+	139854849	139854849	8553170	3	128,56,524,	0,1914,4435,
#Deleted in new
chr6	139854918	139860151	chr6:139854918-139860151	0	+	139854918	139854918	8553170	3	33,56,867,	0,1845,4366,
#Partially deleted in new
chr6	139856103	139877391	chr6:139856103-139877391	3	-	139856103	139856103	8553170	2	693,93,	0,21195,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	139976351	140093721	chr6:139976351-140093721	3	+	139976351	139976351	789624	4	81,444,75,731,	0,91085,110330,116639,
#Partially deleted in new
chr6	140083094	140088430	chr6:140083094-140088430	1	+	140083094	140083094	8553170	3	134,75,667,	0,3587,4669,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	140086681	140093665	chr6:140086681-140093665	0	+	140086681	140086681	8553170	2	80,675,	0,6309,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	140158590	140158694	chr6:140158590-140158694	7	-	140158590	140158590	16724991	1	104,	0,
#Deleted in new
chr6	140205251	140205326	chr6:140205251-140205326	3	+	140205251	140205251	5263520	1	75,	0,
#Deleted in new
chr6	140683813	140683883	chr6:140683813-140683883	3	+	140683813	140683813	5263520	1	70,	0,
#Partially deleted in new
chr6	140761528	140762262	chr6:140761528-140762262	7	+	140761528	140761528	16724991	1	734,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	140845957	140852924	chr6:140845957-140852924	3	-	140845957	140845957	8553170	2	347,106,	0,6861,
#Deleted in new
chr6	140922456	140922910	chr6:140922456-140922910	7	-	140922456	140922456	16724991	1	454,	0,
#Deleted in new
chr6	141019787	141020026	chr6:141019787-141020026	7	-	141019787	141019787	16724991	1	239,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	141447010	141451006	chr6:141447010-141451006	3	+	141447010	141447010	8553170	1	3996,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	141486140	141486412	chr6:141486140-141486412	3	-	141486140	141486140	8553170	1	272,	0,
#Deleted in new
chr6	141635649	141636335	chr6:141635649-141636335	5	-	141635649	141635649	16724991	1	686,	0,
#Deleted in new
chr6	141635719	141636503	chr6:141635719-141636503	7	-	141635719	141635719	16724991	1	784,	0,
#Partially deleted in new
chr6	142058329	142075922	chr6:142058329-142075922	0	-	142058329	142058329	8553170	3	134,88,179,	0,15867,17414,
#Deleted in new
chr6	142062716	142063053	chr6:142062716-142063053	7	+	142062716	142062716	16724991	1	337,	0,
#Partially deleted in new
chr6	142075607	142088799	chr6:142075607-142088799	3	-	142075647	142088658	789624	3	442,349,563,	0,2947,12629,
#Deleted in new
chr6	142088232	142089219	chr6:142088232-142089219	3	+	142088232	142088232	8553170	2	142,80,	0,907,
#Deleted in new
chr6	142133089	142135151	chr6:142133089-142135151	3	+	142133158	142134922	789624	3	108,195,613,	0,760,1449,
#Partially deleted in new
chr6	142147161	142220946	chr6:142147161-142220946	1	+	142147366	142218643	0	6	238,128,76,109,177,2449,	0,22388,23184,42264,51277,71336,
#Partially deleted in new
chr6	142147161	142220946	chr6:142147161-142220946	1	+	142147287	142218643	789624	7	238,95,128,76,109,177,2449,	0,19066,22388,23184,42264,51277,71336,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	142147229	142224689	chr6:142147229-142224689	3	+	142147287	142218643	0	8	170,95,128,76,109,177,81,6192,	0,18998,22320,23116,42196,51209,56755,71268,
#Partially deleted in new
chr6	142147256	142219067	chr6:142147256-142219067	1	+	142147366	142218643	789624	7	143,128,76,109,177,81,570,	0,22293,23089,42169,51182,56728,71241,
#Partially deleted in new
chr6	142170345	142198781	chr6:142170345-142198781	0	+	142170345	142170345	8553170	3	76,109,343,	0,19080,28093,
#Partially deleted in new
chr6	142251846	142259632	chr6:142251846-142259632	3	-	142251846	142251846	8553170	2	120,229,	0,7557,
#Partially deleted in new
chr6	142301853	142446266	chr6:142301853-142446266	1	+	142302329	142443382	789624	26	478,101,342,624,69,84,86,53,63,143,112,65,211,172,141,120,46,107,128,269,97,284,102,153,46,2930,	0,7690,65715,68316,80097,81906,88404,91094,92042,95759,98631,100140,100766,101948,103834,106296,108020,109451,113115,113942,115419,117967,135580,136358,139054,141483,
#Partially deleted in new
chr6	142301858	142446254	chr6:142301858-142446254	1	+	142302329	142443515	789624	24	473,101,342,624,69,86,53,63,143,112,65,211,172,141,120,46,107,128,269,97,284,102,153,2918,	0,7685,65710,68311,80092,88399,91089,92037,95754,98626,100135,100761,101943,103829,106291,108015,109446,113110,113937,115414,117962,135575,136353,141478,
#Partially deleted in new
chr6	142301928	142446248	chr6:142301928-142446248	1	+	142302329	142443382	789624	25	403,101,342,624,69,86,53,63,143,112,65,211,172,141,120,46,107,128,269,97,284,102,153,46,2912,	0,7615,65640,68241,80022,88329,91019,91967,95684,98556,100065,100691,101873,103759,106221,107945,109376,113040,113867,115344,117892,135505,136283,138979,141408,
#Partially deleted in new
chr6	142301928	142446248	chr6:142301928-142446248	3	+	142302329	142443515	789624	25	403,101,342,624,69,84,86,53,63,143,112,65,211,172,141,120,46,107,128,269,97,284,102,153,2912,	0,7615,65640,68241,80022,81831,88329,91019,91967,95684,98556,100065,100691,101873,103759,106221,107945,109376,113040,113867,115344,117892,135505,136283,141408,
#Partially deleted in new
chr6	142301949	142370954	chr6:142301949-142370954	0	+	142301949	142301949	8553170	4	382,101,342,785,	0,7594,65619,68220,
#Partially deleted in new
chr6	142302620	142370451	chr6:142302620-142370451	0	+	142309544	142370451	789624	4	119,101,342,282,	0,6923,64948,67549,
#Partially deleted in new
chr6	142302625	142367890	chr6:142302625-142367890	0	+	142309544	142367890	789624	3	114,101,325,	0,6918,64940,
#Partially deleted in new
chr6	142302625	142381991	chr6:142302625-142381991	0	+	142302625	142302625	8553170	5	114,101,342,59,41,	0,6918,64943,67544,79325,
#Partially deleted in new
chr6	142390311	142400776	chr6:142390311-142400776	0	+	142390311	142400600	789624	5	32,53,63,143,292,	0,2636,3584,7301,10173,
#Partially deleted in new
chr6	142402751	142411349	chr6:142402751-142411349	0	+	142402751	142405698	789624	7	79,172,49,141,120,46,45,	0,1050,2591,2936,5398,7122,8553,
#Deleted in new
chr6	142402777	142404246	chr6:142402777-142404246	0	+	142402777	142402777	8553170	2	53,445,	0,1024,
#Partially deleted in new
chr6	142405308	142408220	chr6:142405308-142408220	0	+	142405308	142405308	8553170	2	520,71,	0,2841,
#Partially deleted in new
chr6	142417108	142443783	chr6:142417108-142443783	0	+	142417108	142417108	8553170	5	261,284,102,153,447,	0,2712,20325,21103,26228,
#Partially deleted in new
chr6	142438043	142443730	chr6:142438043-142443730	0	+	142438043	142438043	8553170	2	321,394,	0,5293,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	142526454	142637889	chr6:142526454-142637889	3	-	142526454	142526454	5263520	3	1929,187,177,	0,18352,111258,
#Partially deleted in new
chr6	142748442	142753759	chr6:142748442-142753759	3	+	142748442	142748442	8553170	2	95,254,	0,5063,
#Partially deleted in new
chr6	142751466	142945201	chr6:142751466-142945201	1	-	142753106	142774738	789624	10	2465,896,102,176,155,5574,45,95,113,103,	0,8305,9997,13332,16915,18085,24680,32054,85468,193632,
#Partially deleted in new
chr6	142751468	142945031	chr6:142751468-142945031	1	-	142753106	142774738	789624	9	2463,896,102,176,155,5574,45,113,231,	0,8303,9995,13330,16913,18083,24678,85466,193332,
#Partially deleted in new
chr6	142751477	142946365	chr6:142751477-142946365	3	-	142753106	142774738	789624	10	2454,896,102,176,155,5574,45,95,113,422,	0,8294,9986,13321,16904,18074,24669,32043,85457,194466,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	142788122	142794086	chr6:142788122-142794086	3	+	142788122	142788122	8553170	2	322,122,	0,5842,
#Partially deleted in new
chr6	142946046	142956698	chr6:142946046-142956698	0	-	142946046	142946046	8553170	2	147,255,	0,10397,
#Deleted in new
chr6	142950210	142956646	chr6:142950210-142956646	3	+	142950210	142950210	8553170	3	181,145,228,	0,5042,6208,
#Partially deleted in new
chr6	142966420	143038077	chr6:142966420-143038077	3	-	142966420	142966420	789624	3	1021,288,1089,	0,55245,70568,
#Partially deleted in new
chr6	142967032	143021953	chr6:142967032-143021953	0	-	142967032	142967032	8553170	3	409,86,288,	0,19012,54633,
#Deleted in new
chr6	143039424	143042324	chr6:143039424-143042324	3	-	143039424	143039424	8553170	2	404,148,	0,2752,
#Partially deleted in new
chr6	143060495	143333356	chr6:143060495-143333356	0	+	143060644	143333356	789624	6	158,120,156,102,116,75,	0,451,76339,104586,223614,272786,
#Partially deleted in new
chr6	143060852	143333293	chr6:143060852-143333293	0	+	143060925	143333293	789624	4	214,102,116,12,	0,104229,223257,272429,
#Partially deleted in new
chr6	143060853	143340290	chr6:143060853-143340290	1	+	143060925	143337994	789624	6	213,156,102,116,164,2313,	0,75981,104228,223256,272428,277124,
#Partially deleted in new
chr6	143060875	143340304	chr6:143060875-143340304	3	+	143060925	143339676	789624	6	191,156,102,116,164,666,	0,75959,104206,223234,272406,278763,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	143060898	143190597	chr6:143060898-143190597	1	+	143060925	143187393	789624	4	168,156,102,3210,	0,75936,104183,126489,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	143060900	143335530	chr6:143060900-143335530	1	+	143060925	143335091	789624	7	166,156,102,116,164,18,480,	0,75934,104181,223209,272381,273177,274150,
#Deleted in new
chr6	143060900	143061606	chr6:143060900-143061606	1	+	143060925	143061216	789624	2	166,393,	0,313,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	143060900	143190597	chr6:143060900-143190597	1	+	143060925	143187643	789624	4	166,156,102,2969,	0,75934,104181,126728,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	143094033	143099645	chr6:143094033-143099645	3	-	143094033	143094033	8553170	2	293,162,	0,5450,
#Partially deleted in new
chr6	143126249	143333445	chr6:143126249-143333445	0	+	143136957	143333445	789624	5	55,156,102,116,164,	0,10585,38832,157860,207032,
#Partially deleted in new
chr6	143164943	143187814	chr6:143164943-143187814	0	+	143164943	143164943	8553170	3	240,146,186,	0,21726,22685,
#Deleted in new
chr6	143298769	143299554	chr6:143298769-143299554	7	-	143298769	143298769	16724991	1	785,	0,
#Deleted in new
chr6	143327274	143327655	chr6:143327274-143327655	7	+	143327274	143327274	16724991	1	381,	0,
#Deleted in new
chr6	143342245	143343383	chr6:143342245-143343383	7	+	143342245	143342245	16724991	1	1138,	0,
#Deleted in new
chr6	143386580	143387409	chr6:143386580-143387409	7	+	143386580	143386580	16724991	2	201,156,	0,673,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	143422831	143441977	chr6:143422831-143441977	1	-	143428462	143438649	0	6	5675,73,107,151,105,540,	0,5780,9673,10999,15758,18606,
#Partially deleted in new
chr6	143426988	143450673	chr6:143426988-143450673	3	-	143428462	143450658	0	6	1518,73,107,151,105,111,	0,1623,5516,6842,11601,23574,
#Deleted in new
chr6	143436215	143436710	chr6:143436215-143436710	7	+	143436215	143436215	16724991	1	495,	0,
#Partially deleted in new
chr6	143444556	143450673	chr6:143444556-143450673	0	-	143444556	143444556	8553170	2	413,111,	0,6006,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	143449808	143449911	chr6:143449808-143449911	7	+	143449808	143449808	16724991	1	103,	0,
#Partially deleted in new
chr6	143450806	143472261	chr6:143450806-143472261	0	+	143451042	143472261	789624	7	309,82,44,125,67,55,102,	0,12109,17315,20154,20576,20750,21353,
#Partially deleted in new
chr6	143450979	143490010	chr6:143450979-143490010	3	+	143451042	143489226	0	12	136,132,82,44,125,67,55,169,71,123,97,868,	0,8105,11936,17142,19981,20403,20577,21180,23806,28096,34172,38163,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	143484978	143507327	chr6:143484978-143507327	3	+	143484978	143484978	8553170	5	270,121,212,118,1358,	0,18415,18952,20361,20991,
#Partially deleted in new
chr6	143485071	143489373	chr6:143485071-143489373	0	+	143485071	143485071	8553170	2	177,231,	0,4071,
#Deleted in new
chr6	143490514	143491367	chr6:143490514-143491367	5	+	143490514	143490514	16724991	1	853,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	143494810	143511690	chr6:143494810-143511690	3	-	143495706	143511634	789624	7	1037,109,191,211,340,188,280,	0,2578,7121,7544,9102,12426,16600,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	143496302	143503996	chr6:143496302-143503996	4	+	143496302	143496302	16724991	3	800,121,66,	0,7091,7628,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	143496951	143502122	chr6:143496951-143502122	0	-	143497358	143502122	789624	2	546,191,	0,4980,
#Partially deleted in new
chr6	143501944	143511690	chr6:143501944-143511690	0	-	143501944	143501944	8553170	3	178,188,280,	0,5292,9466,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	143503393	143506338	chr6:143503393-143506338	4	+	143503393	143503393	16724991	3	121,212,369,	0,537,2576,
#Deleted in new
chr6	143503983	143505115	chr6:143503983-143505115	6	+	143503983	143503983	16724991	2	159,593,	0,539,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	143503983	143505803	chr6:143503983-143505803	4	+	143503983	143503983	16724991	3	159,75,464,	0,539,1356,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	143504017	143506100	chr6:143504017-143506100	4	+	143504017	143504017	16724991	2	125,761,	0,1322,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	143504897	143506406	chr6:143504897-143506406	5	+	143504897	143504897	16724991	2	560,437,	0,1072,
#Partially deleted in new
chr6	143536844	143824164	chr6:143536844-143824164	1	+	143536990	143823689	789624	12	363,168,81,159,538,200,157,56,62,138,77,491,	0,175171,212140,216909,228416,235413,237214,240483,246374,251928,270212,286829,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	143554324	143562031	chr6:143554324-143562031	3	-	143554324	143554324	789624	5	906,211,133,302,147,	0,3206,3674,6842,7560,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	143608179	143831185	chr6:143608179-143831185	1	+	143608309	143823689	789624	13	143,168,81,159,240,538,200,157,56,62,138,77,7512,	0,103836,140805,145574,152221,157081,164078,165879,169148,175039,180593,198877,215494,
#Partially deleted in new
chr6	143608184	143823750	chr6:143608184-143823750	3	+	143608309	143823689	789624	12	138,168,81,159,538,200,157,56,62,138,77,77,	0,103831,140800,145569,157076,164073,165874,169143,175034,180588,198872,215489,
#Partially deleted in new
chr6	143677964	143824121	chr6:143677964-143824121	1	+	143678163	143823689	789624	13	245,168,81,159,240,538,200,157,56,62,138,77,448,	0,34051,71020,75789,82436,87296,94293,96094,99363,105254,110808,129092,145709,
#Partially deleted in new
chr6	143677982	143826177	chr6:143677982-143826177	1	+	143678163	143823689	789624	12	227,168,81,159,538,200,157,56,62,138,77,2504,	0,34033,71002,75771,87278,94275,96076,99345,105236,110790,129074,145691,
#Partially deleted in new
chr6	143678018	143754138	chr6:143678018-143754138	0	+	143678018	143678018	8553170	4	191,168,81,385,	0,33997,70966,75735,
#Partially deleted in new
chr6	143678023	143765500	chr6:143678023-143765500	0	+	143678163	143765500	789624	4	186,168,81,240,	0,33992,70961,87237,
#Partially deleted in new
chr6	143678047	143765474	chr6:143678047-143765474	0	+	143678163	143765474	789624	4	162,81,159,214,	0,70937,75706,87213,
#Partially deleted in new
chr6	143678067	143755499	chr6:143678067-143755499	1	+	143678163	143755312	789624	5	142,168,81,159,195,	0,33948,70917,75686,77237,
#Partially deleted in new
chr6	143678172	143712336	chr6:143678172-143712336	0	+	143678172	143678172	8553170	2	37,321,	0,33843,
#Partially deleted in new
chr6	143748927	143765665	chr6:143748927-143765665	0	+	143748927	143748927	8553170	3	138,159,405,	0,4826,16333,
#Partially deleted in new
chr6	143774167	143789364	chr6:143774167-143789364	0	+	143774167	143774167	8553170	4	48,56,62,592,	0,3160,9051,14605,
#Partially deleted in new
chr6	143807091	143844617	chr6:143807091-143844617	3	+	143807091	143823689	789624	5	42,250,94,244,132,	0,16582,24227,28559,37394,
#Partially deleted in new
chr6	143843343	143863812	chr6:143843343-143863812	3	+	143843477	143863527	0	11	137,132,174,88,142,256,128,140,53,201,396,	0,1142,2707,6787,13959,14408,17082,18760,19500,19742,20073,
#Partially deleted in new
chr6	143857317	143938471	chr6:143857317-143938471	3	+	143857433	143884331	789624	10	127,256,128,62,120,139,140,109,85,330,	0,434,3108,26986,28714,29365,41234,45726,80331,80824,
#Partially deleted in new
chr6	143858061	143858689	chr6:143858061-143858689	7	-	143858061	143858061	16724991	1	628,	0,
#Partially deleted in new
chr6	143864435	143938356	chr6:143864435-143938356	3	+	143864539	143937719	789624	8	132,62,120,139,140,109,85,215,	0,19868,21596,22247,34116,38608,73213,73706,
#Partially deleted in new
chr6	143864435	143938201	chr6:143864435-143938201	0	+	143864435	143864435	8553170	9	132,83,62,120,139,140,109,85,60,	0,17263,19868,21596,22247,34116,38608,73213,73706,
#Partially deleted in new
chr6	143940299	143968978	chr6:143940299-143968978	1	-	143941423	143948136	789624	5	2364,476,74,1444,72,	0,7685,20169,24487,28607,
#Partially deleted in new
chr6	143940299	144008259	chr6:143940299-144008259	1	-	143941423	143948136	789624	7	2364,476,74,32,41,72,170,	0,7685,20169,24487,25858,28607,67790,
#Partially deleted in new
chr6	143940301	144008406	chr6:143940301-144008406	1	-	143941423	143948136	789624	9	2362,476,112,32,124,128,72,40,317,	0,7683,20167,24485,24878,25856,28605,44833,67788,
#Partially deleted in new
chr6	143940301	143968838	chr6:143940301-143968838	1	-	143941423	143942182	789624	3	2087,157,4052,	0,2205,24485,
#Partially deleted in new
chr6	143940301	144008416	chr6:143940301-144008416	1	-	143941423	143948136	789624	4	2362,476,72,327,	0,7683,28605,67788,
#Partially deleted in new
chr6	143940301	144064599	chr6:143940301-144064599	1	-	143941423	143942659	789624	4	2362,74,72,132,	0,20167,28605,124166,
#Partially deleted in new
chr6	143940301	144064599	chr6:143940301-144064599	3	-	143941423	143948136	789624	7	2362,476,74,41,72,40,132,	0,7683,20167,25856,28605,44833,124166,
#Partially deleted in new
chr6	143940334	144008430	chr6:143940334-144008430	1	-	143941423	143948136	8553170	8	2329,476,74,32,100,55,72,341,	0,7650,20134,24452,24845,25823,28572,67755,
#Partially deleted in new
chr6	143940337	143964868	chr6:143940337-143964868	1	-	143941423	143942659	789624	3	2326,88,82,	0,20131,24449,
#Partially deleted in new
chr6	143940745	144008384	chr6:143940745-144008384	1	-	143941423	143948136	789624	7	1918,476,74,32,349,72,295,	0,7239,19723,24041,25104,28161,67344,
#Partially deleted in new
chr6	143940797	144008232	chr6:143940797-144008232	1	-	143941423	143948136	8553170	8	1866,476,74,32,206,41,72,143,	0,7187,19671,23989,24310,25360,28109,67292,
#Partially deleted in new
chr6	143940911	144008256	chr6:143940911-144008256	1	-	143941423	143942659	789624	6	1752,74,32,41,72,167,	0,19557,23875,25246,27995,67178,
#Partially deleted in new
chr6	143941283	143961412	chr6:143941283-143961412	1	-	143941423	143948136	789624	3	1380,476,944,	0,6701,19185,
#Partially deleted in new
chr6	143941423	144008261	chr6:143941423-144008261	1	-	143941423	143942659	789624	6	1240,74,32,55,72,172,	0,19045,23363,24734,27483,66666,
#Partially deleted in new
chr6	143942296	143968950	chr6:143942296-143968950	0	-	143942296	143948136	8553170	5	367,476,84,1412,44,	0,5688,18176,22490,26610,
#Partially deleted in new
chr6	143942352	144064598	chr6:143942352-144064598	0	-	143942352	143942659	789624	4	311,32,72,148,	0,22434,26554,122098,
#Partially deleted in new
chr6	143942419	144064598	chr6:143942419-144064598	0	-	143942419	143942659	789624	6	244,74,32,72,40,131,	0,18049,22367,26487,42715,122048,
#Partially deleted in new
chr6	143942435	144064599	chr6:143942435-144064599	0	-	143942435	143942659	789624	6	228,74,41,72,40,132,	0,18033,23722,26471,42699,122032,
#Partially deleted in new
chr6	143942439	144064599	chr6:143942439-144064599	0	-	143942439	143942659	789624	6	224,88,32,72,40,132,	0,18029,22347,26467,42695,122028,
#Partially deleted in new
chr6	143942623	144064511	chr6:143942623-144064511	0	-	143942623	143942659	789624	5	40,32,128,72,61,	0,22163,23534,26283,121827,
#Partially deleted in new
chr6	143942623	144008118	chr6:143942623-144008118	0	-	143942623	143948136	789624	6	40,476,74,32,72,29,	0,5361,17845,22163,26283,65466,
#Partially deleted in new
chr6	143948246	144007347	chr6:143948246-144007347	0	-	143948246	143948246	8553170	6	214,84,32,41,72,116,	0,12226,16540,17911,20660,58985,
#Partially deleted in new
chr6	143948259	144064575	chr6:143948259-144064575	0	-	143948259	143948259	8553170	6	201,88,32,41,72,125,	0,12209,16527,17898,20647,116191,
#Partially deleted in new
chr6	143948343	144064598	chr6:143948343-144064598	0	-	143948343	143948343	8553170	7	117,74,32,73,72,40,148,	0,12125,16443,17814,20563,36791,116107,
#Partially deleted in new
chr6	143965786	144008794	chr6:143965786-144008794	0	-	143965786	143965786	8553170	4	412,72,40,60,	0,3120,19348,42948,
#Partially deleted in new
chr6	143965955	144008823	chr6:143965955-144008823	0	-	143965955	143965955	8553170	3	330,72,89,	0,2951,42779,
#Partially deleted in new
chr6	143968608	144064540	chr6:143968608-144064540	0	-	143968608	143968608	8553170	3	370,62,73,	0,16526,95859,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	144004915	144008262	chr6:144004915-144008262	3	-	144004915	144004915	789624	1	3347,	0,
#Deleted in new
chr6	144007226	144007464	chr6:144007226-144007464	3	+	144007226	144007226	8553170	1	238,	0,
#Partially deleted in new
chr6	144036617	144037704	chr6:144036617-144037704	7	+	144036617	144036617	16724991	3	364,192,93,	0,486,994,
#Deleted in new
chr6	144094880	144095573	chr6:144094880-144095573	3	-	144095236	144095497	0	1	693,	0,
#Deleted in new
chr6	144136449	144136775	chr6:144136449-144136775	7	+	144136449	144136449	16724991	1	326,	0,
#Partially deleted in new
chr6	144150525	144188370	chr6:144150525-144188370	3	+	144186627	144187491	789624	2	178,1748,	0,36097,
#Deleted in new
chr6	144200446	144200965	chr6:144200446-144200965	7	-	144200446	144200446	16724991	1	519,	0,
#Deleted in new
chr6	144257033	144257624	chr6:144257033-144257624	7	-	144257033	144257033	16724991	1	591,	0,
#Partially deleted in new
chr6	144285700	144403184	chr6:144285700-144403184	0	+	144291828	144403184	789624	3	121,171,62,	0,6036,117422,
#Partially deleted in new
chr6	144291828	144853034	chr6:144291828-144853034	3	+	144291828	144850997	0	74	79,62,93,78,93,173,116,161,204,182,151,120,102,108,180,170,124,88,242,181,146,213,114,156,171,180,135,150,162,129,174,156,171,180,129,171,159,138,192,173,151,176,136,150,76,215,118,206,155,190,173,157,130,269,147,79,61,62,75,202,86,158,167,112,137,39,66,66,159,241,112,93,23,2046,	0,111294,130049,131720,132157,134458,136949,137752,144106,145736,146916,148523,152452,155382,155773,156771,159541,161953,166941,167345,169368,170825,181891,182775,187983,190380,193556,195719,196844,198242,199100,201472,207428,219115,222080,222821,224400,224982,230151,231187,239223,241256,245753,247465,250966,256811,259136,262859,265328,285270,386577,408258,438528,456417,459977,462891,466100,480078,482461,490093,497365,502005,505995,511207,529053,535519,535782,536961,543951,544472,547344,548911,554976,559160,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	144311698	144333301	chr6:144311698-144333301	3	-	144311698	144311698	8553170	2	395,106,	0,21497,
#Partially deleted in new
chr6	144330819	144426358	chr6:144330819-144426358	0	+	144330966	144426358	789624	6	199,62,93,78,93,72,	0,72303,91058,92729,93166,95467,
#Partially deleted in new
chr6	144344100	144426328	chr6:144344100-144426328	0	+	144344210	144426328	789624	6	204,62,93,78,93,42,	0,59022,77777,79448,79885,82186,
#Deleted in new
chr6	144397958	144398752	chr6:144397958-144398752	7	+	144397958	144397958	16724991	1	794,	0,
#Partially deleted in new
chr6	144583209	144851003	chr6:144583209-144851003	1	+	144583456	144850997	789624	25	391,173,157,130,269,147,79,61,62,75,202,86,158,167,112,137,39,66,66,159,241,112,93,23,15,	0,95196,116877,147147,165036,168596,171510,174719,188697,191080,198712,205984,210624,214614,219826,237672,244138,244401,245580,252570,253091,255963,257530,263595,267779,
#Partially deleted in new
chr6	144659843	144678552	chr6:144659843-144678552	0	+	144660224	144678552	789624	2	432,147,	0,18562,
#Deleted in new
chr6	144706732	144707047	chr6:144706732-144707047	7	-	144706732	144706732	16724991	1	315,	0,
#Deleted in new
chr6	144708105	144708497	chr6:144708105-144708497	7	-	144708105	144708105	16724991	1	392,	0,
#Deleted in new
chr6	144754713	144758310	chr6:144754713-144758310	0	+	144754713	144754713	8553170	2	85,382,	0,3215,
#Partially deleted in new
chr6	144789228	144828851	chr6:144789228-144828851	0	+	144789228	144828851	789624	7	51,158,167,112,137,66,62,	0,4605,8595,13807,31653,38382,39561,
#Partially deleted in new
chr6	144797744	144835830	chr6:144797744-144835830	0	+	144797868	144835830	789624	6	246,112,137,66,66,51,	0,5291,23137,29866,31045,38035,
#Partially deleted in new
chr6	144797744	144828855	chr6:144797744-144828855	0	+	144797868	144828855	789624	6	246,112,137,39,66,66,	0,5291,23137,29603,29866,31045,
#Partially deleted in new
chr6	144799380	144835938	chr6:144799380-144835938	0	+	144799453	144835938	789624	6	93,112,137,66,66,159,	0,3655,21501,28230,29409,36399,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	144836372	144837244	chr6:144836372-144837244	0	+	144836372	144836372	8553170	2	241,131,	0,741,
#Partially deleted in new
chr6	144839048	144846822	chr6:144839048-144846822	0	+	144839048	144839048	8553170	3	236,93,18,	0,1691,7756,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	145296544	145311092	chr6:145296544-145311092	3	+	145296544	145296544	8553170	2	49,3798,	0,10750,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	145382534	145735281	chr6:145382534-145735281	0	-	145384023	145735281	789624	5	1563,54,242,175,84,	0,119987,252710,303587,352663,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	145463237	145463399	chr6:145463237-145463399	3	-	145463237	145463237	8553170	1	162,	0,
#Partially deleted in new
chr6	145489629	145492092	chr6:145489629-145492092	7	-	145489629	145489629	16724991	2	1553,326,	0,2137,
#Partially deleted in new
chr6	145501582	145686219	chr6:145501582-145686219	0	-	145501806	145686219	789624	4	265,54,242,98,	0,939,133662,184539,
#Partially deleted in new
chr6	145625303	145735855	chr6:145625303-145735855	3	-	145627415	145735498	0	4	2390,242,175,658,	0,9941,60818,109894,
#Partially deleted in new
chr6	145625303	145735986	chr6:145625303-145735986	1	-	145627415	145686183	0	4	2390,242,175,79,	0,9941,60818,110604,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	145625303	145721742	chr6:145625303-145721742	0	-	145625303	145625303	8553170	4	2390,242,175,842,	0,9941,60818,95597,
#Partially deleted in new
chr6	145625305	145735276	chr6:145625305-145735276	0	-	145671248	145735276	789624	5	2388,242,161,175,79,	0,9939,45933,60816,109892,
#Partially deleted in new
chr6	145625311	145735855	chr6:145625311-145735855	1	-	145625694	145735498	0	5	415,204,242,175,658,	0,2178,9933,60810,109886,
#Partially deleted in new
chr6	145625352	145736023	chr6:145625352-145736023	1	-	145627415	145686183	0	4	2341,242,175,28,	0,9892,60769,110643,
#Partially deleted in new
chr6	145625370	145735498	chr6:145625370-145735498	1	-	145625694	145735498	0	5	354,206,242,175,301,	0,2117,9874,60751,109827,
#Partially deleted in new
chr6	145625490	145735498	chr6:145625490-145735498	1	-	145627494	145735498	0	3	2203,175,301,	0,60631,109707,
#Partially deleted in new
chr6	145625944	145686936	chr6:145625944-145686936	1	-	145627415	145686183	0	4	1749,242,175,37,	0,9300,60177,60955,
#Partially deleted in new
chr6	145625995	145634682	chr6:145625995-145634682	0	-	145625995	145625995	8553170	2	1698,175,	0,8512,
#Partially deleted in new
chr6	145626759	145735281	chr6:145626759-145735281	0	-	145686277	145735281	789624	4	934,242,175,37,	0,8485,59362,108485,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	145626789	145686877	chr6:145626789-145686877	0	-	145671248	145686183	789624	5	904,242,161,175,34,	0,8455,44449,59332,60054,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	145626790	145632323	chr6:145626790-145632323	0	-	145626790	145626790	8553170	1	5533,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	145626809	145641286	chr6:145626809-145641286	0	-	145626809	145626809	8553170	2	884,6042,	0,8435,
#Partially deleted in new
chr6	145627278	145735964	chr6:145627278-145735964	1	-	145627494	145686183	789624	3	415,175,57,	0,58843,108629,
#Partially deleted in new
chr6	145627328	145686939	chr6:145627328-145686939	1	-	145627415	145686183	0	4	365,242,175,19,	0,7916,58793,59592,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	145627385	145686931	chr6:145627385-145686931	1	-	145627415	145686183	0	4	308,242,175,88,	0,7859,58736,59458,
#Partially deleted in new
chr6	145627441	145670411	chr6:145627441-145670411	0	-	145627441	145627441	8553170	3	252,242,57,	0,7803,42913,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	145633719	145686901	chr6:145633719-145686901	0	-	145671248	145686183	789624	5	168,242,161,175,58,	0,1525,37519,52402,53124,
#Partially deleted in new
chr6	145635084	145671359	chr6:145635084-145671359	0	-	145635084	145635084	8553170	2	402,95,	0,36180,
#Partially deleted in new
chr6	145635429	145735514	chr6:145635429-145735514	0	-	145635429	145635429	8553170	2	57,317,	0,99768,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	145671304	145686922	chr6:145671304-145686922	0	-	145671304	145671304	8553170	6	95,48,251,25,57,79,	0,8778,11104,14817,14935,15539,
#Partially deleted in new
chr6	145671334	145735989	chr6:145671334-145735989	0	-	145671334	145671334	8553170	3	65,175,82,	0,14787,64573,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	145682504	145686933	chr6:145682504-145686933	0	-	145682504	145682504	8553170	4	155,152,175,13,	0,2236,3617,4416,
#Deleted in new
chr6	145734577	145735426	chr6:145734577-145735426	0	-	145734577	145734577	8553170	1	849,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	145735569	145737218	chr6:145735569-145737218	3	+	145735569	145735569	8553170	1	1649,	0,
#Deleted in new
chr6	145736910	145737173	chr6:145736910-145737173	3	-	145736910	145736910	8553170	1	263,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	145789269	145791973	chr6:145789269-145791973	3	-	145789269	145789269	8553170	1	2704,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	145789759	145791832	chr6:145789759-145791832	0	-	145789759	145789759	8553170	1	2073,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	145793501	145814753	chr6:145793501-145814753	3	-	145800105	145806405	0	3	6808,2050,151,	0,10870,21101,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	145799408	145881639	chr6:145799408-145881639	0	+	145799408	145799408	8553170	3	90,117,61,	0,10369,82170,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	145811938	145815278	chr6:145811938-145815278	1	+	145811938	145811938	8553170	2	8,210,	0,3130,
#Partially deleted in new
chr6	145815297	145883661	chr6:145815297-145883661	2	+	145815297	145815297	8553170	3	134,70,457,	0,66281,67907,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	145815297	145871493	chr6:145815297-145871493	0	+	145815297	145815297	8553170	2	134,564,	0,55632,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	145815377	145871294	chr6:145815377-145871294	0	+	145815377	145815377	8553170	4	54,96,87,365,	0,12983,47257,55552,
#Partially deleted in new
chr6	145864244	145893354	chr6:145864244-145893354	0	-	145864322	145893354	789624	3	247,81,140,	0,23775,28970,
#Partially deleted in new
chr6	145884806	145964389	chr6:145884806-145964389	3	-	145886690	145955322	0	30	1981,81,179,87,93,189,72,102,144,226,63,174,143,108,93,89,122,257,164,79,252,660,257,109,151,79,219,130,665,233,	0,3213,8408,9343,10078,25641,28671,33324,34541,36360,37479,37856,38836,39932,41397,42382,48250,50100,50471,55916,56816,58336,60574,61426,62686,63465,65457,67542,69883,79350,
#Partially deleted in new
chr6	145884812	145964097	chr6:145884812-145964097	1	-	145886427	145955322	0	30	1628,81,179,87,93,189,72,102,144,226,63,159,143,108,93,89,149,257,164,79,252,660,257,109,151,79,219,130,665,367,	0,3207,8402,9337,10072,25635,28665,33318,34535,36354,37473,37850,38830,39926,41391,42376,48244,50094,50465,55910,56810,58330,60568,61420,62680,63459,65451,67536,69877,78918,
#Partially deleted in new
chr6	145884815	145964097	chr6:145884815-145964097	1	-	145886690	145955322	789624	30	1972,81,179,87,93,189,72,102,144,226,63,159,143,108,93,89,149,257,164,79,252,660,257,109,151,79,219,130,665,367,	0,3204,8399,9334,10069,25632,28662,33315,34532,36351,37470,37847,38827,39923,41388,42373,48241,50091,50462,55907,56807,58327,60565,61417,62677,63456,65448,67533,69874,78915,
#Partially deleted in new
chr6	145885492	145964097	chr6:145885492-145964097	1	-	145886690	145955322	0	30	1295,81,179,87,93,189,72,102,144,226,63,174,143,108,93,89,122,257,164,79,252,660,257,109,151,79,219,130,665,367,	0,2527,7722,8657,9392,24955,27985,32638,33855,35674,36793,37170,38150,39246,40711,41696,47564,49414,49785,55230,56130,57650,59888,60740,62000,62779,64771,66856,69197,78238,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr6	145903255	145955256	chr6:145903255-145955256	0	-	145945561	145955256	789624	24	7381,72,102,144,226,63,174,143,108,93,89,122,257,164,79,252,660,276,109,151,79,219,130,567,	0,10222,14875,16092,17911,19030,19407,20387,21483,22948,23933,29801,31651,32022,37467,38367,39887,42125,42977,44237,45016,47008,49093,51434,
#Partially deleted in new
chr6	145917112	145964423	chr6:145917112-145964423	0	-	145927273	145955322	0	24	1120,144,226,63,174,143,108,93,89,129,257,164,79,252,660,257,109,151,79,219,130,164,168,267,	0,2235,4054,5173,5550,6530,7626,9091,10076,15937,17794,18165,23610,24510,26030,28268,29120,30380,31159,33151,35236,37577,38074,47044,
#Partially deleted in new
chr6	145917119	145964423	chr6:145917119-145964423	1	-	145941794	145955322	789624	25	1113,144,226,63,174,143,108,93,89,129,258,164,79,205,45,660,257,109,151,79,219,130,164,168,267,	0,2228,4047,5166,5543,6523,7619,9084,10069,15930,17786,18158,23603,24503,24710,26023,28261,29113,30373,31152,33144,35229,37570,38067,47037,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	145918416	145927336	chr6:145918416-145927336	0	-	145918416	145918416	8553170	8	1075,226,63,174,143,108,93,148,	0,2750,3869,4246,5226,6322,7787,8772,
#Deleted in new
chr6	145934907	145935842	chr6:145934907-145935842	0	-	145934907	145934907	8553170	2	256,565,	0,370,
#Partially deleted in new
chr6	145945559	145954717	chr6:145945559-145954717	0	-	145950481	145954717	789624	8	78,109,151,79,219,133,130,28,	0,673,1933,2712,4704,6231,6789,9130,
#Partially deleted in new
chr6	146027645	146159692	chr6:146027645-146159692	0	+	146027645	146027645	8553170	3	147,1023,345,	0,1549,131702,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	146027702	146159891	chr6:146027702-146159891	0	+	146027702	146027702	8553170	3	90,1020,544,	0,1495,131645,
#Partially deleted in new
chr6	146027781	146437598	chr6:146027781-146437598	1	+	146029517	146434796	0	9	47,1020,250,236,247,169,127,931,3727,	0,1416,131566,276829,324468,329744,359108,370987,406090,
#Partially deleted in new
chr6	146027781	146437595	chr6:146027781-146437595	3	+	146029517	146426619	0	10	47,1020,250,236,247,169,127,931,85,3724,	0,1416,131566,276829,324468,329744,359108,370987,398777,406090,
#Partially deleted in new
chr6	146029282	146437598	chr6:146029282-146437598	1	+	146029517	146434796	0	8	935,250,236,247,169,127,931,3727,	0,130065,275328,322967,328243,357607,369486,404589,
#Partially deleted in new
chr6	146029282	146434885	chr6:146029282-146434885	1	+	146029517	146433973	0	8	935,250,236,247,169,127,931,979,	0,130065,275328,322967,328243,357607,369486,404624,
#Partially deleted in new
chr6	146029485	146434885	chr6:146029485-146434885	1	+	146029517	146426619	0	9	732,250,236,247,169,127,931,85,979,	0,129862,275125,322764,328040,357404,369283,397073,404421,
#Deleted in new
chr6	146171314	146171847	chr6:146171314-146171847	7	+	146171314	146171314	16724991	1	533,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	146340419	146340524	chr6:146340419-146340524	7	+	146340419	146340419	16724991	1	105,	0,
#Deleted in new
chr6	146364930	146365494	chr6:146364930-146365494	7	-	146364930	146364930	16724991	1	564,	0,
#Partially deleted in new
chr6	146543692	146554965	chr6:146543692-146554965	3	+	146543871	146554605	0	3	429,278,510,	0,5771,10763,
#Deleted in new
chr6	146594515	146598931	chr6:146594515-146598931	3	-	146594515	146594515	789624	3	1989,102,99,	0,3554,4317,
#Partially deleted in new
chr6	146598964	146815462	chr6:146598964-146815462	3	+	146599040	146815217	789624	36	150,163,93,72,210,140,87,248,129,95,175,91,130,34,187,64,103,142,115,168,136,138,94,135,154,188,185,200,112,173,177,103,222,97,184,431,	0,36410,45808,55170,57806,65236,67851,73255,77348,86769,92151,93860,101976,116417,117918,118571,122438,125221,127118,129609,134155,134928,137533,141494,142153,146957,153565,164936,170055,183055,185653,186645,189424,202218,202863,216067,
#Partially deleted in new
chr6	146598966	146656852	chr6:146598966-146656852	0	+	146599040	146635395	789624	6	148,31,145,93,72,82,	0,1366,36426,45806,55168,57804,
#Partially deleted in new
chr6	146598969	146656922	chr6:146598969-146656922	0	+	146599040	146656922	789624	5	145,145,93,72,152,	0,36423,45803,55165,57801,
#Partially deleted in new
chr6	146598999	146724377	chr6:146598999-146724377	0	+	146598999	146598999	8553170	18	115,163,93,72,210,140,87,248,129,95,175,91,130,34,187,64,103,192,	0,36375,45773,55135,57771,65201,67816,73220,77313,86734,92116,93825,101941,116382,117883,118536,122403,125186,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr6	146599004	146815462	chr6:146599004-146815462	0	+	146599040	146672270	789624	32	110,163,93,72,210,248,129,95,175,91,130,187,64,103,2012,168,136,138,94,135,154,188,185,200,112,173,177,103,222,97,184,431,	0,36370,45768,55130,57766,73215,77308,86729,92111,93820,101936,117878,118531,122398,125181,129569,134115,134888,137493,141454,142113,146917,153525,164896,170015,183015,185613,186605,189384,202178,202823,216027,
#Partially deleted in new
chr6	146638843	146639261	chr6:146638843-146639261	7	-	146638843	146638843	16724991	1	418,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	146639699	146639769	chr6:146639699-146639769	3	+	146639699	146639699	8553170	1	70,	0,
#Partially deleted in new
chr6	146656932	146664394	chr6:146656932-146664394	0	+	146656932	146664368	789624	2	48,194,	0,7268,
#Partially deleted in new
chr6	146716882	146815459	chr6:146716882-146815459	0	+	146716882	146788391	789624	20	187,64,103,142,115,168,136,138,94,135,154,188,185,173,56,103,222,97,184,428,	0,653,4520,7303,9200,11691,16237,17010,19615,23576,24235,29039,35647,65137,67735,68727,71506,84300,84945,98149,
#Partially deleted in new
chr6	146736517	146815462	chr6:146736517-146815462	0	+	146736517	146815217	789624	12	74,135,154,188,185,173,177,103,222,97,184,431,	0,3941,4600,9404,16012,45502,48100,49092,51871,64665,65310,78514,
#Partially deleted in new
chr6	146770438	146801254	chr6:146770438-146801254	0	+	146770578	146801254	789624	6	171,173,177,103,222,72,	0,11581,14179,15171,17950,30744,
#Partially deleted in new
chr6	146770444	146788504	chr6:146770444-146788504	0	+	146770578	146788504	789624	4	165,173,103,116,	0,11575,15165,17944,
#Partially deleted in new
chr6	146770444	146785649	chr6:146770444-146785649	0	+	146770444	146770444	8553170	4	165,173,56,40,	0,11575,14173,15165,
#Partially deleted in new
chr6	146801858	146807838	chr6:146801858-146807838	0	+	146801858	146807587	789624	2	153,437,	0,5543,
#Deleted in new
chr6	146802358	146803824	chr6:146802358-146803824	7	-	146802358	146802358	16724991	1	1466,	0,
#Deleted in new
chr6	146802794	146803709	chr6:146802794-146803709	5	-	146802794	146802794	16724991	1	915,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	146841900	146915885	chr6:146841900-146915885	3	-	146841900	146841900	8553170	5	1076,114,511,114,210,	0,8639,8920,69651,73775,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	146842565	147204540	chr6:146842565-147204540	0	-	146842565	146842565	789624	11	244,394,507,126,26,103,43,61,55,134,128,	0,1753,8259,18052,129479,158875,232239,276851,331027,331249,361847,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	146843113	147204614	chr6:146843113-147204614	1	-	146843113	146843113	8553170	11	1599,507,126,26,103,43,61,71,55,134,202,	0,7711,17504,128931,158327,231691,276303,326899,330479,330701,361299,
#Deleted in new
chr6	146850158	146851005	chr6:146850158-146851005	0	-	146850158	146850158	8553170	2	438,181,	0,666,
#Partially deleted in new
chr6	146859180	146863081	chr6:146859180-146863081	3	+	146859180	146859180	8553170	3	58,81,316,	0,2780,3585,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	146860656	147131918	chr6:146860656-147131918	0	-	146860656	146860656	8553170	5	87,103,43,61,53,	0,140784,214148,258760,271209,
#Partially deleted in new
chr6	146864458	146911606	chr6:146864458-146911606	0	-	146864458	146864458	8553170	4	144,220,98,55,	0,13656,41460,47093,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	146911825	147131986	chr6:146911825-147131986	1	-	146911825	146911825	8553170	7	114,176,26,103,43,61,121,	0,50565,60219,89615,162979,207591,220040,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	146948527	146951159	chr6:146948527-146951159	3	-	146948527	146948527	8553170	2	1213,931,	0,1701,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	147119416	147202467	chr6:147119416-147202467	0	-	147119416	147119416	8553170	5	61,71,55,134,98,	0,50596,54176,54398,82953,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	147158924	147180992	chr6:147158924-147180992	3	+	147158924	147158924	789624	3	60,129,264,	0,6806,21804,
#Partially deleted in new
chr6	147204424	147390476	chr6:147204424-147390476	3	+	147204532	147384755	789624	26	258,98,82,101,135,64,84,124,79,155,73,148,68,41,221,179,126,152,66,51,240,370,166,112,221,5763,	0,1546,30825,34745,56190,57865,62659,73656,86669,105659,107030,109459,109839,110171,111090,111804,120534,122700,129732,148898,154659,158910,159576,169306,178353,180289,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	147204424	147293385	chr6:147204424-147293385	1	+	147204532	147292260	789624	10	258,98,82,101,135,64,84,124,79,1135,	0,1546,30825,34745,56190,57865,62659,73656,86669,87826,
#Partially deleted in new
chr6	147204532	147384755	chr6:147204532-147384755	1	+	147204532	147384755	789624	28	150,98,82,101,135,64,84,124,79,155,73,148,68,41,221,179,126,152,66,60,48,51,240,370,166,112,221,42,	0,1438,30717,34637,56082,57757,62551,73548,86561,105551,106922,109351,109731,110063,110982,111696,120426,122592,129624,134646,134804,148790,154551,158802,159468,169198,178245,180181,
#Partially deleted in new
chr6	147204532	147384755	chr6:147204532-147384755	1	+	147204532	147384755	789624	25	150,98,82,101,135,64,84,124,79,155,73,148,68,41,221,179,126,152,66,240,370,166,112,221,42,	0,1438,30717,34637,56082,57757,62551,73548,86561,105551,106922,109351,109731,110063,110982,111696,120426,122592,129624,154551,158802,159468,169198,178245,180181,
#Partially deleted in new
chr6	147327172	147359323	chr6:147327172-147359323	0	+	147327172	147359323	789624	5	104,66,60,51,240,	0,6984,12006,26150,31911,
#Partially deleted in new
chr6	147327200	147363608	chr6:147327200-147363608	0	+	147327200	147363608	789624	6	76,84,66,51,240,274,	0,1498,6956,26122,31883,36134,
#Deleted in new
chr6	147387663	147390465	chr6:147387663-147390465	0	+	147387663	147387663	8553170	2	73,1404,	0,1398,
#Deleted in new
chr6	147406530	147406824	chr6:147406530-147406824	7	+	147406530	147406530	16724991	1	294,	0,
#Deleted in new
chr6	147406888	147408281	chr6:147406888-147408281	7	+	147406888	147406888	16724991	1	1393,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	147508926	147570021	chr6:147508926-147570021	3	+	147508928	147564456	789624	2	461,5628,	0,55467,
#Partially deleted in new
chr6	147509225	147737547	chr6:147509225-147737547	0	+	147509225	147737448	789624	2	162,231,	0,228091,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	147660736	147737556	chr6:147660736-147737556	0	+	147660736	147660736	8553170	3	83,83,240,	0,72992,76580,
#Partially deleted in new
chr6	147676074	147737556	chr6:147676074-147737556	0	+	147676074	147676074	8553170	3	81,83,240,	0,57654,61242,
#Partially deleted in new
chr6	147692397	147737556	chr6:147692397-147737556	1	+	147692397	147692397	8553170	3	90,83,240,	0,41331,44919,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	147741433	147743324	chr6:147741433-147743324	3	-	147741433	147741433	8553170	2	451,152,	0,1739,
#Deleted in new
chr6	148017421	148020974	chr6:148017421-148020974	3	-	148017421	148017421	8553170	3	144,163,139,	0,1371,3414,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	148133808	148137404	chr6:148133808-148137404	3	-	148133808	148133808	8553170	2	330,96,	0,3500,
#Partially deleted in new
chr6	148237584	148283408	chr6:148237584-148283408	3	-	148237584	148237584	8553170	4	31,75,146,59,	0,2402,42698,45765,
#Partially deleted in new
chr6	148272303	148440694	chr6:148272303-148440694	0	+	148272303	148272303	8553170	4	74,129,51,337,	0,117830,167880,168054,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	148278671	148278778	chr6:148278671-148278778	3	+	148278671	148278671	8553170	1	107,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr6	148342592	148552050	chr6:148342592-148552050	3	+	148343067	148548558	0	20	631,129,51,50,41,87,113,102,133,347,75,144,136,170,210,151,114,1139,132,3756,	0,47541,97591,97765,125952,128824,131517,145021,171731,176954,182698,184860,188933,190204,191178,192158,197850,201087,203422,205702,
#Partially deleted in new
chr6	148440357	148469111	chr6:148440357-148469111	0	+	148440357	148440357	8553170	2	50,567,	0,28187,
#Partially deleted in new
chr6	148440376	148519762	chr6:148440376-148519762	0	+	148440376	148487666	789624	5	31,41,102,133,216,	0,28168,47237,73947,79170,
#Partially deleted in new
chr6	148478692	148480763	chr6:148478692-148480763	7	+	148478692	148478692	16724991	3	326,722,380,	0,660,1691,
#Partially deleted in new
chr6	148508473	148519884	chr6:148508473-148519884	0	+	148508865	148519884	789624	3	404,133,338,	0,5850,11073,
#Partially deleted in new
chr6	148509266	148519913	chr6:148509266-148519913	0	+	148509266	148509266	8553170	3	71,133,367,	0,5057,10280,
#Partially deleted in new
chr6	148513436	148519728	chr6:148513436-148519728	0	+	148513436	148513436	8553170	3	237,133,182,	0,887,6110,
#Partially deleted in new
chr6	148513881	148519714	chr6:148513881-148519714	0	+	148513881	148513881	8553170	3	278,133,168,	0,442,5665,
#Partially deleted in new
chr6	148514323	148527485	chr6:148514323-148527485	0	+	148514323	148527485	789624	4	133,836,75,33,	0,5223,10967,13129,
#Partially deleted in new
chr6	148524412	148552048	chr6:148524412-148552048	1	+	148533806	148548558	789624	10	953,144,170,210,151,114,1139,132,1438,624,	0,3040,8384,9358,10338,16030,19267,21602,23882,27012,
#Partially deleted in new
chr6	148527264	148532817	chr6:148527264-148532817	0	+	148527264	148527264	8553170	3	332,136,21,	0,4261,5532,
#Deleted in new
chr6	148567377	148567654	chr6:148567377-148567654	7	-	148567377	148567377	16724991	1	277,	0,
#Partially deleted in new
chr6	148647706	148648597	chr6:148647706-148648597	7	-	148647706	148647706	16724991	1	891,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	148747327	149076990	chr6:148747327-149076990	3	+	148747430	149074116	789624	8	350,44,156,80,154,98,158,3158,	0,139658,193951,206544,217082,271811,273996,326505,
#Partially deleted in new
chr6	148953906	149005588	chr6:148953906-149005588	0	+	148953906	148953906	8553170	3	45,154,286,	0,10503,51396,
#Partially deleted in new
chr6	148955627	148964684	chr6:148955627-148964684	3	-	148955627	148955627	789624	3	526,64,124,	0,3350,8933,
#Partially deleted in new
chr6	149027699	149032573	chr6:149027699-149032573	3	-	149027699	149027699	8553170	2	81,49,	0,4825,
#Partially deleted in new
chr6	149066175	149074250	chr6:149066175-149074250	0	+	149066175	149066175	8553170	2	79,418,	0,7657,
#Deleted in new
chr6	149112008	149112672	chr6:149112008-149112672	7	-	149112008	149112008	16724991	1	664,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	149217925	149221287	chr6:149217925-149221287	0	+	149217925	149217925	8553170	3	159,154,486,	0,697,2876,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	149217935	149245554	chr6:149217935-149245554	3	+	149217935	149217935	8553170	4	149,154,64,1826,	0,687,11996,25793,
#Partially deleted in new
chr6	149218000	149230159	chr6:149218000-149230159	0	+	149218000	149218000	789624	3	84,154,228,	0,622,11931,
#Partially deleted in new
chr6	149218640	149378529	chr6:149218640-149378529	0	+	149378137	149378529	789624	2	136,512,	0,159377,
#Partially deleted in new
chr6	149218697	149244072	chr6:149218697-149244072	0	+	149218697	149218697	8553170	2	79,344,	0,25031,
#Partially deleted in new
chr6	149243298	149257551	chr6:149243298-149257551	3	-	149243298	149243298	789624	3	186,376,168,	0,327,14085,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	149246094	149255415	chr6:149246094-149255415	3	+	149246094	149246094	8553170	3	981,65,171,	0,6969,9150,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	149291351	149291646	chr6:149291351-149291646	3	+	149291351	149291351	8553170	1	295,	0,
#Deleted in new
chr6	149304106	149304428	chr6:149304106-149304428	7	-	149304106	149304106	16724991	1	322,	0,
#Partially deleted in new
chr6	149317533	149411395	chr6:149317533-149411395	1	+	149378767	149409719	789624	6	90,847,161,94,81,1819,	0,61138,80070,80435,81570,92043,
#Partially deleted in new
chr6	149317619	149411382	chr6:149317619-149411382	3	+	149369997	149409719	0	7	396,191,1501,161,94,81,1806,	0,52289,60398,79984,80349,81484,91957,
#Partially deleted in new
chr6	149321051	149411613	chr6:149321051-149411613	1	+	149369997	149409719	0	8	339,149,191,1501,161,94,81,2037,	0,21633,48857,56966,76552,76917,78052,88525,
#Partially deleted in new
chr6	149321051	149372404	chr6:149321051-149372404	0	+	149369997	149372404	789624	4	339,149,167,22,	0,21633,48857,51331,
#Partially deleted in new
chr6	149342656	149411611	chr6:149342656-149411611	1	+	149369997	149409719	0	7	177,191,1501,161,94,81,2035,	0,27252,35361,54947,55312,56447,66920,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	149342812	149411516	chr6:149342812-149411516	0	+	149369997	149379941	0	8	21,191,1501,210,161,94,81,1940,	0,27096,35205,37121,54791,55156,56291,66764,
#Partially deleted in new
chr6	149397691	149409617	chr6:149397691-149409617	0	+	149397691	149397691	8553170	3	371,81,41,	0,1412,11885,
#Partially deleted in new
chr6	149400226	149401292	chr6:149400226-149401292	3	+	149400391	149400679	789624	1	1066,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	149446794	149485061	chr6:149446794-149485061	3	-	149450682	149474543	789624	6	4685,107,235,140,375,249,	0,5821,9871,15036,27444,38018,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	149447657	149449380	chr6:149447657-149449380	0	-	149447657	149447657	8553170	2	388,947,	0,776,
#Partially deleted in new
chr6	149452116	149456869	chr6:149452116-149456869	0	-	149452607	149456869	789624	2	606,204,	0,4549,
#Partially deleted in new
chr6	149459523	149483133	chr6:149459523-149483133	1	-	149459619	149474543	789624	4	155,140,375,83,	0,2307,14715,23527,
#Partially deleted in new
chr6	149461667	149483175	chr6:149461667-149483175	0	-	149461667	149461667	8553170	3	303,375,125,	0,12571,21383,
#Partially deleted in new
chr6	149491566	149492289	chr6:149491566-149492289	7	-	149491566	149491566	16724991	1	723,	0,
#Partially deleted in new
chr6	149504732	149546038	chr6:149504732-149546038	3	-	149505452	149546005	789624	13	972,148,97,112,67,125,117,97,143,118,65,68,103,	0,7422,12621,16327,20410,21919,28725,29945,30863,36209,36634,36786,41203,
#Partially deleted in new
chr6	149505274	149517864	chr6:149505274-149517864	1	-	149505445	149512279	789624	3	430,148,511,	0,6880,12079,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	149516955	149517017	chr6:149516955-149517017	3	+	149516955	149516955	8553170	1	62,	0,
#Partially deleted in new
chr6	149561151	149563949	chr6:149561151-149563949	3	+	149561151	149561151	8553170	2	78,300,	0,2498,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	149566293	149591748	chr6:149566293-149591748	3	+	149566414	149590838	789624	8	241,60,97,152,157,131,164,1022,	0,5991,6213,12528,13540,14299,16146,24433,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	149566293	149591748	chr6:149566293-149591748	0	+	149566414	149580655	8553170	8	241,60,97,152,157,133,164,1022,	0,5991,6213,12528,13540,14297,16146,24433,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	149576088	149590864	chr6:149576088-149590864	3	-	149576088	149576088	8553170	5	241,154,130,116,103,	0,1281,1998,8326,14673,
#Partially deleted in new
chr6	149578922	149582283	chr6:149578922-149582283	0	+	149578922	149582098	789624	4	51,157,131,224,	0,911,1670,3137,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	149592686	149601878	chr6:149592686-149601878	7	+	149592686	149592686	16724991	3	840,558,323,	0,1295,8869,
#Deleted in new
chr6	149594083	149594543	chr6:149594083-149594543	5	+	149594083	149594083	16724991	1	460,	0,
#Deleted in new
chr6	149594624	149594759	chr6:149594624-149594759	3	+	149594624	149594624	8553170	1	135,	0,
#Partially deleted in new
chr6	149594872	149648735	chr6:149594872-149648735	1	-	149595220	149638547	789624	8	362,135,127,159,181,158,175,267,	0,2634,3351,6721,28230,37886,43513,53596,
#Partially deleted in new
chr6	149594872	149638592	chr6:149594872-149638592	1	-	149595035	149638547	789624	10	362,127,135,127,159,106,122,181,158,207,	0,2190,2634,3351,6721,8395,9788,28230,37886,43513,
#Partially deleted in new
chr6	149594876	149648804	chr6:149594876-149648804	3	-	149595035	149638547	789624	11	358,127,135,127,159,106,122,181,158,175,336,	0,2186,2630,3347,6717,8391,9784,28226,37882,43509,53592,
#Partially deleted in new
chr6	149597129	149623111	chr6:149597129-149623111	0	-	149597129	149597129	8553170	7	60,135,127,206,106,122,9,	0,377,1094,4464,6138,7531,25973,
#Partially deleted in new
chr6	149598052	149603373	chr6:149598052-149603373	0	-	149598052	149598052	8553170	3	298,159,106,	0,3541,5215,
#Partially deleted in new
chr6	149598267	149648693	chr6:149598267-149648693	0	-	149598267	149598267	8553170	5	83,159,106,181,225,	0,3326,5000,24835,50201,
#Partially deleted in new
chr6	149601639	149648751	chr6:149601639-149648751	0	-	149601639	149638547	789624	7	113,106,122,181,158,175,283,	0,1628,3021,21463,31119,36746,46829,
#Partially deleted in new
chr6	149603363	149648972	chr6:149603363-149648972	0	-	149603363	149638547	789624	6	10,122,181,158,175,70,	0,1297,19739,29395,35022,45539,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	149658152	149718256	chr6:149658152-149718256	3	-	149661728	149702126	0	8	4086,107,183,583,1514,148,488,408,	0,18107,18402,21722,24926,36921,43626,59696,
#Partially deleted in new
chr6	149661093	149702354	chr6:149661093-149702354	1	-	149661728	149702126	0	7	1145,107,183,583,1514,148,576,	0,15166,15461,18781,21985,33980,40685,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	149661696	149716425	chr6:149661696-149716425	0	-	149697126	149702126	789624	9	542,107,183,583,1514,148,95,488,219,	0,14563,14858,18178,21382,33377,35395,40082,54510,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	149675695	149701963	chr6:149675695-149701963	0	-	149675695	149675695	8553170	6	671,183,583,1514,148,185,	0,859,4179,7383,19378,26083,
#Partially deleted in new
chr6	149682918	149718105	chr6:149682918-149718105	1	-	149683015	149702126	0	4	1674,148,488,257,	0,12155,18860,34930,
#Partially deleted in new
chr6	149684324	149718034	chr6:149684324-149718034	0	-	149684324	149718034	789624	3	268,148,186,	0,10749,33524,
#Partially deleted in new
chr6	149684403	149718024	chr6:149684403-149718024	0	-	149697126	149702126	789624	5	189,148,95,488,176,	0,10670,12688,17375,33445,
#Deleted in new
chr6	149717620	149718888	chr6:149717620-149718888	3	+	149717620	149717620	789624	1	1268,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	149724314	149746572	chr6:149724314-149746572	3	-	149726968	149746495	0	8	2884,123,152,136,181,78,123,197,	0,7298,12156,14328,18075,19323,21625,22061,
#Partially deleted in new
chr6	149726767	149746528	chr6:149726767-149746528	1	-	149726968	149746495	0	6	431,123,181,78,123,153,	0,4845,15622,16870,19172,19608,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	149731397	149746560	chr6:149731397-149746560	0	-	149738745	149746495	789624	6	338,152,136,78,123,185,	0,5073,7245,12240,14542,14978,
#Partially deleted in new
chr6	149731564	149746552	chr6:149731564-149746552	0	-	149736560	149746495	789624	6	171,152,181,78,123,177,	0,4906,10825,12073,14375,14811,
#Partially deleted in new
chr6	149738765	149746535	chr6:149738765-149746535	0	-	149738765	149746495	789624	5	13,181,78,144,160,	0,3624,4872,7174,7610,
#Partially deleted in new
chr6	149743637	149749665	chr6:149743637-149749665	0	-	149743637	149743637	8553170	3	78,123,322,	0,2302,5706,
#Partially deleted in new
chr6	149749442	149811420	chr6:149749442-149811420	1	+	149749901	149810628	789624	8	514,105,32,105,121,86,170,805,	0,21719,23695,40511,44106,46972,52757,61173,
#Partially deleted in new
chr6	149749443	149802530	chr6:149749443-149802530	1	+	149749901	149802379	789624	7	513,105,32,105,121,86,331,	0,21718,23694,40510,44105,46971,52756,
#Partially deleted in new
chr6	149749443	149811420	chr6:149749443-149811420	3	+	149749901	149802379	789624	8	513,105,32,105,121,86,217,805,	0,21718,23694,40510,44105,46971,52756,61172,
#Partially deleted in new
chr6	149749443	149796433	chr6:149749443-149796433	0	+	149749901	149772088	789624	7	513,105,200,32,105,121,19,	0,21718,22604,23694,40510,44105,46971,
#Partially deleted in new
chr6	149749694	149811420	chr6:149749694-149811420	1	+	149749727	149802379	0	7	262,32,105,121,86,217,805,	0,23443,40259,43854,46720,52505,60921,
#Partially deleted in new
chr6	149749694	149811420	chr6:149749694-149811420	1	+	149749727	149802379	789624	7	262,105,32,121,86,217,805,	0,21467,23443,43854,46720,52505,60921,
#Partially deleted in new
chr6	149749694	149811420	chr6:149749694-149811420	1	+	149749727	149802379	789624	8	262,105,32,105,121,86,217,805,	0,21467,23443,40259,43854,46720,52505,60921,
#Partially deleted in new
chr6	149749726	149773150	chr6:149749726-149773150	0	+	149749901	149772042	789624	4	230,105,234,13,	0,21435,22287,23411,
#Partially deleted in new
chr6	149749726	149790056	chr6:149749726-149790056	0	+	149749901	149772613	789624	5	230,105,130,32,103,	0,21435,22828,23411,40227,
#Partially deleted in new
chr6	149749727	149810628	chr6:149749727-149810628	1	+	149749727	149810628	789624	8	229,105,32,105,121,86,170,13,	0,21434,23410,40226,43821,46687,52472,60888,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	149749815	149793669	chr6:149749815-149793669	0	+	149749901	149765752	789624	7	141,63,105,234,32,105,121,	0,15875,21346,22198,23322,40138,43733,
#Partially deleted in new
chr6	149750043	149793632	chr6:149750043-149793632	0	+	149771199	149793632	789624	5	222,105,32,105,84,	0,21118,23094,39910,43505,
#Partially deleted in new
chr6	149794762	149795746	chr6:149794762-149795746	7	+	149794762	149794762	16724991	2	149,527,	0,457,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	149796150	149798172	chr6:149796150-149798172	3	-	149796150	149796150	8553170	2	1289,252,	0,1770,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	149797316	149826294	chr6:149797316-149826294	3	-	149797316	149797316	8553170	2	845,31,	0,28947,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	149797374	149799150	chr6:149797374-149799150	0	-	149797374	149797374	8553170	2	787,95,	0,1681,
#Deleted in new
chr6	149810039	149810908	chr6:149810039-149810908	0	+	149810039	149810039	8553170	2	84,293,	0,576,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr6	149817936	149896011	chr6:149817936-149896011	3	-	149869064	149890901	8553170	15	2767,96,213,126,142,158,89,129,78,217,129,276,261,218,166,	0,8327,18148,19401,25046,35066,46948,47279,50766,50925,70602,71411,71948,72880,77909,
#Partially deleted in new
chr6	149818797	149864026	chr6:149818797-149864026	3	-	149820548	149864020	789624	7	1906,96,213,126,142,158,619,	0,7466,17287,18540,24185,34205,44610,
#Partially deleted in new
chr6	149826110	149836199	chr6:149826110-149836199	0	-	149826110	149826110	8553170	2	249,115,	0,9974,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	149840437	149864026	chr6:149840437-149864026	1	-	149842611	149864020	789624	4	2239,142,158,619,	0,2545,12565,22970,
#Deleted in new
chr6	149852461	149853192	chr6:149852461-149853192	3	+	149852461	149852461	8553170	2	103,209,	0,522,
#Partially deleted in new
chr6	149863493	149919507	chr6:149863493-149919507	3	+	149863493	149863493	789624	2	889,321,	0,55693,
#Deleted in new
chr6	149879961	149881572	chr6:149879961-149881572	7	+	149879961	149879961	16724991	1	1611,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	149883374	149896059	chr6:149883374-149896059	1	-	149884487	149890901	789624	5	1130,276,261,218,214,	0,5973,6510,7442,12471,
#Partially deleted in new
chr6	149884430	149919506	chr6:149884430-149919506	2	+	149884430	149884430	8553170	3	25,89,320,	0,1154,34756,
#Deleted in new
chr6	149888464	149891034	chr6:149888464-149891034	3	-	149888497	149890901	789624	4	203,276,261,218,	0,883,1420,2352,
#Deleted in new
chr6	149888471	149890932	chr6:149888471-149890932	0	-	149889509	149890901	789624	4	196,276,155,116,	0,876,1519,2345,
#Deleted in new
chr6	149888497	149891034	chr6:149888497-149891034	1	-	149888497	149890901	789624	4	170,276,157,214,	0,850,1387,2323,
#Deleted in new
chr6	149889094	149890901	chr6:149889094-149890901	1	-	149889339	149890901	789624	3	529,261,85,	0,790,1722,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	149889989	149898102	chr6:149889989-149898102	0	-	149889989	149890901	789624	4	156,218,187,82,	0,827,5856,8031,
#Partially deleted in new
chr6	149890102	149919508	chr6:149890102-149919508	1	+	149890102	149890102	789624	3	62,107,322,	0,6030,29084,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	149895478	149898077	chr6:149895478-149898077	0	-	149895478	149895478	8553170	2	554,57,	0,2542,
#Deleted in new
chr6	149904242	149906418	chr6:149904242-149906418	7	+	149904242	149904242	16724991	1	2176,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	149916877	149923078	chr6:149916877-149923078	3	-	149916911	149923010	789624	5	197,211,282,264,153,	0,1296,2165,2675,6048,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	149916912	149923010	chr6:149916912-149923010	0	-	149918273	149923010	789624	5	162,111,282,264,85,	0,1261,2130,2640,6013,
#Deleted in new
chr6	149918706	149923121	chr6:149918706-149923121	1	-	149919007	149923010	789624	3	618,264,196,	0,846,4219,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	149934526	149936318	chr6:149934526-149936318	7	+	149934526	149934526	16724991	2	253,851,	0,941,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	149934526	149935620	chr6:149934526-149935620	5	+	149934526	149934526	16724991	2	253,247,	0,847,
#Partially deleted in new
chr6	149935964	149936782	chr6:149935964-149936782	5	+	149935964	149935964	16724991	2	364,76,	0,742,
#Partially deleted in new
chr6	149941999	149949235	chr6:149941999-149949235	3	+	149942072	149947429	789624	5	158,264,282,132,513,	0,3309,4372,5320,6723,
#Deleted in new
chr6	149951832	149952239	chr6:149951832-149952239	7	+	149951832	149951832	16724991	1	407,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	149964006	149973710	chr6:149964006-149973710	3	+	149964049	149970125	789624	5	128,264,276,132,2342,	0,4600,5078,6009,7362,
#Deleted in new
chr6	149977470	149979105	chr6:149977470-149979105	7	+	149977470	149977470	16724991	2	264,287,	0,1348,
#Deleted in new
chr6	149977921	149978416	chr6:149977921-149978416	7	+	149977921	149977921	16724991	1	495,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	149998018	150005144	chr6:149998018-150005144	7	-	149998018	149998018	16724991	4	866,129,816,72,	0,2047,2834,7054,
#Deleted in new
chr6	150000089	150005157	chr6:150000089-150005157	5	-	150000089	150000089	16724991	4	105,276,318,85,	0,763,1261,4983,
#Partially deleted in new
chr6	150018333	150025471	chr6:150018333-150025471	3	-	150020129	150025471	0	5	522,132,282,264,85,	0,1774,2571,3646,7053,
#Partially deleted in new
chr6	150020129	150025532	chr6:150020129-150025532	1	-	150020129	150025471	0	4	110,282,264,146,	0,775,1850,5257,
#Deleted in new
chr6	150032768	150033566	chr6:150032768-150033566	7	+	150032768	150032768	16724991	2	268,328,	0,470,
#Deleted in new
chr6	150040546	150042033	chr6:150040546-150042033	3	-	150040546	150040546	8553170	2	627,253,	0,1234,
#Deleted in new
chr6	150042545	150043353	chr6:150042545-150043353	7	+	150042545	150042545	16724991	1	808,	0,
#Deleted in new
chr6	150063149	150069095	chr6:150063149-150069095	3	-	150064606	150069066	0	5	202,129,276,264,117,	0,1435,2248,2749,5829,
#Deleted in new
chr6	150064606	150069066	chr6:150064606-150069066	1	-	150064606	150069066	0	4	107,276,264,88,	0,791,1292,4372,
#Partially deleted in new
chr6	150143075	150250357	chr6:150143075-150250357	3	+	150143192	150248820	789624	4	423,84,33,1612,	0,71668,73748,105670,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	150368891	150404628	chr6:150368891-150404628	1	+	150369031	150398137	0	6	318,192,160,157,112,6574,	0,20460,23453,25207,26563,29163,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	150368891	150405969	chr6:150368891-150405969	3	+	150369031	150398237	0	5	318,192,160,157,7915,	0,20460,23453,25207,29163,
#Partially deleted in new
chr6	150368952	150398109	chr6:150368952-150398109	0	+	150369031	150395450	0	6	257,192,160,157,173,55,	0,20399,23392,25146,26441,29102,
#Partially deleted in new
chr6	150368952	150398109	chr6:150368952-150398109	1	+	150369031	150395450	0	6	257,192,160,157,61,55,	0,20399,23392,25146,26441,29102,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	150368996	150396816	chr6:150368996-150396816	1	+	150369031	150396484	789624	6	213,192,160,157,112,346,	0,20355,23348,25102,26458,27474,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	150368996	150396890	chr6:150368996-150396890	1	+	150369031	150395622	789624	5	213,192,160,157,1436,	0,20355,23348,25102,26458,
#Partially deleted in new
chr6	150369088	150389630	chr6:150369088-150389630	0	+	150369088	150369088	8553170	2	121,279,	0,20263,
#Partially deleted in new
chr6	150369154	150398109	chr6:150369154-150398109	0	+	150369154	150392435	789624	5	55,124,160,157,55,	0,20197,23190,24944,28900,
#Partially deleted in new
chr6	150369976	150395532	chr6:150369976-150395532	1	+	150369999	150395450	789624	5	36,192,160,157,139,	0,19375,22368,24122,25417,
#Deleted in new
chr6	150384306	150385120	chr6:150384306-150385120	7	-	150384306	150384306	16724991	1	814,	0,
#Partially deleted in new
chr6	150504810	150510300	chr6:150504810-150510300	7	-	150504810	150504810	16724991	3	109,58,695,	0,3816,4795,
#Partially deleted in new
chr6	150599882	150733821	chr6:150599882-150733821	0	+	150733681	150733821	789624	4	135,46,59,238,	0,38197,50845,133701,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	150599902	150664488	chr6:150599902-150664488	0	+	150599902	150599902	8553170	3	115,59,2054,	0,50825,62532,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	150599902	150664488	chr6:150599902-150664488	0	+	150599902	150599902	8553170	3	115,59,2054,	0,50825,62532,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	150600833	150605850	chr6:150600833-150605850	3	+	150600833	150600833	8553170	2	50,328,	0,4689,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	150624676	150626086	chr6:150624676-150626086	3	+	150624676	150624676	8553170	2	283,356,	0,1054,
#Partially deleted in new
chr6	150632942	150733673	chr6:150632942-150733673	0	+	150632942	150632942	8553170	4	362,46,59,90,	0,5137,17785,100641,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	150650771	150652025	chr6:150650771-150652025	3	-	150650771	150650771	8553170	2	409,205,	0,1049,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr6	150683611	150843350	chr6:150683611-150843350	3	+	150733681	150840896	789624	16	271,509,101,70,47,151,132,183,96,87,34,96,39,23,1624,3518,	0,49972,85026,102778,112244,117107,120998,125493,125769,126036,134571,136067,137583,140042,146970,156221,
#Partially deleted in new
chr6	150686761	150734092	chr6:150686761-150734092	0	+	150686872	150734092	789624	2	229,509,	0,46822,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr6	150721087	150843665	chr6:150721087-150843665	1	+	150733681	150840896	789624	16	113,509,101,70,47,151,132,183,96,87,34,96,39,23,1624,3833,	0,12496,47550,65302,74768,79631,83522,88017,88293,88560,97095,98591,100107,102566,109494,118745,
#Partially deleted in new
chr6	150768685	150842056	chr6:150768685-150842056	0	+	150768685	150841056	789624	15	53,70,47,151,132,183,96,87,34,96,39,23,146,101,218,	0,17704,27170,32033,35924,40419,40695,40962,49497,50993,52509,54968,61896,72349,73153,
#Deleted in new
chr6	150827662	150828384	chr6:150827662-150828384	7	+	150827662	150827662	16724991	1	722,	0,
#Partially deleted in new
chr6	150865548	151101887	chr6:150865548-151101887	3	+	150865822	151092556	789624	28	501,85,51,54,125,101,137,112,92,98,174,137,47,108,75,103,77,141,69,112,140,42,101,178,108,153,121,362,	0,10541,12085,12224,17213,20085,22296,40101,53028,56656,60573,71255,73150,78937,79918,83482,90446,94726,99420,106398,144270,148230,149331,149967,168944,171416,226918,235977,
#Partially deleted in new
chr6	150865678	151101885	chr6:150865678-151101885	1	+	150865822	151092556	789624	28	371,85,51,54,125,101,140,112,92,98,174,137,47,108,75,103,77,141,69,112,140,42,101,178,108,153,121,360,	0,10411,11955,12094,17083,19955,22163,39971,52898,56526,60443,71125,73020,78807,79788,83352,90316,94596,99290,106268,144140,148100,149201,149837,168814,171286,226788,235847,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	150865715	150899021	chr6:150865715-150899021	1	+	150865822	150898907	789624	8	334,85,51,54,125,101,137,162,	0,10374,11918,12057,17046,19918,22129,33144,
#Partially deleted in new
chr6	150865943	150926153	chr6:150865943-150926153	0	+	150865943	150926153	789624	11	106,85,51,54,125,101,140,112,92,98,32,	0,10146,11690,11829,16818,19690,21898,39706,52633,56261,60178,
#Partially deleted in new
chr6	150866332	151101885	chr6:150866332-151101885	1	+	150866358	151092556	789624	28	55,85,51,54,125,101,140,112,92,98,174,137,47,108,75,103,77,141,69,112,140,42,101,178,108,153,121,360,	0,9757,11301,11440,16429,19301,21509,39317,52244,55872,59789,70471,72366,78153,79134,82698,89662,93942,98636,105614,143486,147446,148547,149183,168160,170632,226134,235193,
#Partially deleted in new
chr6	150866505	150936915	chr6:150866505-150936915	0	+	150877651	150905663	789624	11	130,85,51,54,125,101,112,92,98,174,112,	0,9584,11128,11267,16256,19128,39144,52071,55699,59616,70298,
#Partially deleted in new
chr6	150866556	150887873	chr6:150866556-150887873	0	+	150877651	150887873	789624	7	79,85,51,54,125,101,29,	0,9533,11077,11216,16205,19077,21288,
#Partially deleted in new
chr6	150905669	150912948	chr6:150905669-150912948	0	+	150905669	150905669	8553170	2	92,281,	0,6998,
#Deleted in new
chr6	150934967	150935566	chr6:150934967-150935566	7	+	150934967	150934967	16724991	1	599,	0,
#Deleted in new
chr6	150939221	150939328	chr6:150939221-150939328	3	+	150939221	150939221	8553170	1	107,	0,
#Partially deleted in new
chr6	150971947	151009958	chr6:150971947-151009958	0	+	150971947	150971947	8553170	3	111,170,140,	0,13091,37871,
#Partially deleted in new
chr6	151014879	151022355	chr6:151014879-151022355	0	+	151014879	151022040	789624	3	101,178,327,	0,636,7149,
#Partially deleted in new
chr6	151034531	151042064	chr6:151034531-151042064	0	+	151034531	151041840	789624	3	69,153,281,	0,2433,7252,
#Partially deleted in new
chr6	151036973	151042058	chr6:151036973-151042058	0	+	151036973	151041805	789624	2	144,283,	0,4802,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	151054896	151056057	chr6:151054896-151056057	3	-	151054896	151054896	8553170	2	109,287,	0,874,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	151088102	151228447	chr6:151088102-151228447	3	-	151088102	151088102	8553170	5	278,141,118,250,66,	0,49502,50646,62786,140279,
#Deleted in new
chr6	151099528	151099933	chr6:151099528-151099933	7	+	151099528	151099528	16724991	1	405,	0,
#Deleted in new
chr6	151196680	151197638	chr6:151196680-151197638	3	-	151196680	151196680	8553170	2	684,120,	0,838,
#Partially deleted in new
chr6	151201340	151201444	chr6:151201340-151201444	3	+	151201340	151201340	8553170	1	104,	0,
#Partially deleted in new
chr6	151225549	151225947	chr6:151225549-151225947	7	-	151225549	151225549	16724991	1	398,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	151239998	151358557	chr6:151239998-151358557	3	+	151240562	151353740	789624	5	61,341,157,5042,2831,	0,385,65748,108712,115728,
#Partially deleted in new
chr6	151240373	151356773	chr6:151240373-151356773	1	+	151240562	151353740	789624	4	351,157,5042,1047,	0,65373,108337,115353,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	151280514	151280612	chr6:151280514-151280612	3	-	151280514	151280514	8553170	1	98,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	151298840	151298933	chr6:151298840-151298933	3	-	151298840	151298840	8553170	1	93,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	151319634	151319950	chr6:151319634-151319950	3	+	151319634	151319634	8553170	1	316,	0,
#Partially deleted in new
chr6	151325687	151356773	chr6:151325687-151356773	1	+	151325860	151353740	789624	3	198,5042,1047,	0,23023,30039,
#Partially deleted in new
chr6	151341685	151356773	chr6:151341685-151356773	1	+	151341782	151353740	789624	3	101,5042,1047,	0,7025,14041,
#Partially deleted in new
chr6	151341701	151349186	chr6:151341701-151349186	0	+	151341701	151341701	8553170	2	85,476,	0,7009,
#Partially deleted in new
chr6	151364116	151391548	chr6:151364116-151391548	3	-	151365520	151373637	789624	3	2776,185,129,	0,9348,27303,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	151404761	151452181	chr6:151404761-151452181	1	-	151405234	151445811	789624	12	506,117,121,77,65,107,101,40,76,109,518,166,	0,958,12517,16483,17779,18763,22720,25376,28393,31684,40546,47254,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	151404853	151444625	chr6:151404853-151444625	0	-	151436431	151436548	789624	11	414,117,121,77,65,107,101,40,76,135,160,	0,866,12425,16391,17687,18671,22628,25284,28301,31566,39612,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	151404853	151452126	chr6:151404853-151452126	1	-	151405234	151445811	789624	12	414,117,121,77,65,107,101,40,76,109,518,111,	0,866,12425,16391,17687,18671,22628,25284,28301,31592,40454,47162,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	151404883	151452158	chr6:151404883-151452158	3	-	151405234	151436548	789624	11	384,117,121,77,65,107,101,40,76,109,143,	0,836,12395,16361,17657,18641,22598,25254,28271,31562,47132,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	151404900	151436466	chr6:151404900-151436466	0	-	151421283	151436466	789624	9	367,117,121,77,107,101,40,76,21,	0,819,12378,16344,18624,22581,25237,28254,31545,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	151405052	151452125	chr6:151405052-151452125	0	-	151408765	151445811	789624	13	215,117,258,121,77,65,107,101,40,76,109,518,110,	0,667,3590,12226,16192,17488,18472,22429,25085,28102,31393,40255,46963,
#Partially deleted in new
chr6	151405720	151445708	chr6:151405720-151445708	0	-	151430148	151445708	789624	10	116,121,77,65,107,101,66,76,109,401,	0,11558,15524,16820,17804,21761,24417,27434,30725,39587,
#Partially deleted in new
chr6	151411258	151413945	chr6:151411258-151413945	7	-	151411258	151411258	16724991	2	652,134,	0,2553,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	151416590	151452092	chr6:151416590-151452092	0	-	151416590	151416590	8553170	11	809,47,77,65,107,101,40,76,135,518,77,	0,1942,4654,5950,6934,10891,13547,16564,19829,28717,35425,
#Partially deleted in new
chr6	151420705	151452145	chr6:151420705-151452145	0	-	151420705	151420705	8553170	7	616,107,40,76,109,518,130,	0,2819,9432,12449,15740,24602,31310,
#Partially deleted in new
chr6	151423525	151436826	chr6:151423525-151436826	0	-	151423525	151423525	8553170	5	106,101,40,76,407,	0,3956,6612,9629,12894,
#Partially deleted in new
chr6	151436234	151452018	chr6:151436234-151452018	1	-	151436431	151445811	789624	3	320,518,3,	0,9073,15781,
#Partially deleted in new
chr6	151444969	151452074	chr6:151444969-151452074	0	-	151444969	151444969	8553170	2	856,59,	0,7046,
#Deleted in new
chr6	151445035	151446030	chr6:151445035-151446030	0	-	151445035	151445035	8553170	1	995,	0,
#Partially deleted in new
chr6	151452257	151470097	chr6:151452257-151470097	1	+	151458537	151469110	789624	4	329,245,166,1755,	0,6070,12195,16085,
#Partially deleted in new
chr6	151452286	151470101	chr6:151452286-151470101	3	+	151452545	151469110	789624	5	300,106,245,166,1759,	0,2261,6041,12166,16056,
#Partially deleted in new
chr6	151452485	151468542	chr6:151452485-151468542	0	+	151452545	151458457	789624	4	101,245,166,200,	0,5842,11967,15857,
#Partially deleted in new
chr6	151452523	151464566	chr6:151452523-151464566	0	+	151452523	151452523	8553170	4	277,106,245,114,	0,2024,5804,11929,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	151494029	151621193	chr6:151494029-151621193	3	+	151494128	151618147	789624	11	156,129,257,145,186,318,201,174,243,237,3247,	0,42288,44015,50542,54274,79144,91859,99077,102305,121413,123917,
#Partially deleted in new
chr6	151536270	151544694	chr6:151536270-151544694	0	+	151536270	151536270	8553170	3	176,257,123,	0,1774,8301,
#Partially deleted in new
chr6	151593027	151615520	chr6:151593027-151615520	0	+	151593027	151593027	8553170	3	253,243,78,	0,3307,22415,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	151615772	151615879	chr6:151615772-151615879	3	-	151615772	151615772	8553170	1	107,	0,
#Partially deleted in new
chr6	151656690	151807857	chr6:151656690-151807857	0	+	151656690	151656690	8553170	3	73,131,15,	0,45184,151152,
#Partially deleted in new
chr6	151690495	151808166	chr6:151690495-151808166	0	+	151807912	151808166	789624	3	169,131,324,	0,11379,117347,
#Partially deleted in new
chr6	151690495	152103274	chr6:151690495-152103274	3	+	151807912	152098966	0	10	169,131,522,191,117,336,139,134,184,4543,	0,11379,117347,152101,190159,253677,321160,370495,403889,408236,
#Partially deleted in new
chr6	151804430	152099053	chr6:151804430-152099053	1	+	151807912	152098966	0	9	1390,522,191,117,336,139,134,184,322,	0,3412,38166,76224,139742,207225,256560,289954,294301,
#Deleted in new
chr6	151807195	151808259	chr6:151807195-151808259	0	+	151807912	151808259	789624	2	314,417,	0,647,
#Partially deleted in new
chr6	151807318	152103274	chr6:151807318-152103274	1	+	151807912	152098966	0	9	191,522,191,117,336,139,134,184,4543,	0,524,35278,73336,136854,204337,253672,287066,291413,
#Partially deleted in new
chr6	151807550	152103274	chr6:151807550-152103274	1	+	151807912	152098966	0	8	814,191,117,336,139,134,184,4543,	0,35046,73104,136622,204105,253440,286834,291181,
#Partially deleted in new
chr6	151807678	152098978	chr6:151807678-152098978	1	+	151807912	152098966	789624	4	686,134,184,247,	0,253312,286706,291053,
#Partially deleted in new
chr6	151807678	152098978	chr6:151807678-152098978	1	+	151807912	151880661	789624	5	686,117,134,184,247,	0,72976,253312,286706,291053,
#Partially deleted in new
chr6	151808104	151811278	chr6:151808104-151811278	0	+	151808104	151808104	8553170	2	260,270,	0,2904,
#Partially deleted in new
chr6	151809106	152129619	chr6:151809106-152129619	1	+	151842663	152125348	789624	7	165,191,117,336,139,134,4354,	0,33490,71548,135066,202549,251884,316159,
#Deleted in new
chr6	151813275	151814179	chr6:151813275-151814179	3	-	151813275	151813275	8553170	2	204,54,	0,850,
#Partially deleted in new
chr6	151880656	152061059	chr6:151880656-152061059	0	+	151880656	152061059	789624	3	115,139,69,	0,130999,180334,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	151936129	152118399	chr6:151936129-152118399	0	+	151936129	151936129	8553170	7	88,336,139,134,184,189,137,	0,8043,75526,124861,158255,162602,182133,
#Partially deleted in new
chr6	151944171	151984165	chr6:151944171-151984165	0	+	151944171	151944171	8553170	3	337,113,191,	0,39276,39803,
#Partially deleted in new
chr6	151944207	152094568	chr6:151944207-152094568	1	+	151944207	152094568	789624	2	42,90,	0,150271,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	152112758	152118397	chr6:152112758-152118397	3	+	152112758	152112758	8553170	2	376,135,	0,5504,
#Partially deleted in new
chr6	152121683	152637399	chr6:152121683-152637399	1	-	152122435	152628280	789624	148	993,59,93,213,129,201,212,127,143,334,192,138,183,151,188,163,167,159,156,126,195,235,95,148,155,147,183,205,134,171,156,156,177,150,183,133,197,132,174,201,120,102,210,156,132,157,110,132,192,174,195,162,168,141,195,144,183,123,186,138,153,153,106,260,219,321,1264,543,266,177,126,147,168,153,186,171,156,318,165,45,49,173,165,156,144,183,178,137,357,165,310,173,292,156,209,116,208,204,102,183,159,151,180,629,154,88,104,188,99,228,148,176,141,171,168,165,109,209,159,135,209,31,126,135,174,144,153,165,203,97,169,113,4,17,165,138,108,51,110,197,179,93,84,96,62,290,168,211,	0,9036,10438,11592,13420,14934,18266,19519,21939,26361,27793,29869,30275,33208,34226,42479,54710,58452,67568,80140,84484,86288,89810,91928,93222,96573,97319,99158,99742,102810,104037,108863,109707,110432,112097,112984,114423,115133,117849,120556,122853,127477,133196,133907,134950,140348,146372,147471,156405,160123,162294,171904,172276,178957,180185,186805,188151,188712,189004,195165,197179,199554,200037,201794,203400,204629,208046,209664,212324,215157,217557,222397,228484,228934,230484,231579,231905,232975,236689,240486,242042,243163,245534,247288,247787,251353,254697,255092,259322,263990,265388,268596,269593,273832,275091,276935,277932,279454,282529,285330,287384,287875,291668,294703,297885,303697,306029,306521,308428,308798,312111,314242,319446,320391,322727,325774,327849,328941,329363,331902,333742,334202,334235,334984,337073,339913,341054,341669,343574,344298,349913,350617,352951,359472,361401,363151,366712,377058,380949,383517,388509,389327,398775,404396,418276,506581,514954,515505,
#Partially deleted in new
chr6	152121683	152637399	chr6:152121683-152637399	3	-	152122435	152628331	0	146	993,59,93,213,129,201,212,127,143,334,192,138,183,151,188,163,167,159,156,126,195,235,95,148,155,147,183,205,134,171,156,156,177,150,183,133,197,132,174,201,120,102,210,156,132,157,110,132,192,174,195,162,168,141,195,144,183,123,186,138,183,153,153,166,260,219,145,338,2161,266,177,126,147,177,168,153,327,171,156,318,165,144,154,173,165,156,144,183,178,137,357,165,310,173,292,156,206,113,208,204,102,183,159,151,180,629,154,167,124,188,99,228,151,161,141,171,168,165,109,209,159,135,165,159,174,144,153,165,203,97,169,113,165,138,108,51,110,197,179,93,84,96,62,290,168,211,	0,9036,10438,11592,13420,14934,18266,19519,21939,26361,27793,29869,30275,33208,34226,42479,54710,58452,67568,80140,84484,86288,89810,91928,93222,96573,97319,99158,99742,102810,104037,108863,109707,110432,112097,112984,114423,115133,117849,120556,122853,127477,133196,133907,134950,140348,146372,147471,156405,160123,162294,171904,172276,178957,180185,186805,188151,188712,189004,195165,196397,197179,199554,200037,201794,203400,204274,204612,208046,212324,215157,217557,222397,225375,228484,228934,230343,231579,231905,232975,236689,237631,240486,243163,245534,247288,247787,251353,254697,255092,259322,263990,265388,268596,269593,273832,275091,276935,277932,279454,282529,285330,287384,287875,291668,294703,297885,303697,306009,306521,308428,308798,312111,314257,319446,320391,322727,325774,327849,328941,329363,331902,333742,334202,337073,339913,341054,341669,343574,344298,349913,350617,361401,363151,366712,377058,380949,383517,388509,389327,398775,404396,418276,506581,514954,515505,
#Partially deleted in new
chr6	152121686	152218385	chr6:152121686-152218385	0	-	152122640	152218385	789624	25	990,93,213,129,201,212,127,143,334,192,138,183,151,188,163,167,159,156,126,195,235,95,148,155,129,	0,10435,11589,13417,14931,18263,19516,21936,26358,27790,29866,30272,33205,34223,42476,54707,58449,67565,80137,84481,86285,89807,91925,93219,96570,
#Partially deleted in new
chr6	152121686	152636851	chr6:152121686-152636851	1	-	152122435	152628331	789624	146	990,59,93,213,129,201,212,127,143,69,334,192,138,183,151,188,163,167,159,156,126,195,235,95,148,155,147,183,205,134,171,156,156,177,150,183,133,197,132,174,201,120,102,210,156,132,157,110,132,192,174,195,162,168,141,195,140,187,123,186,138,183,153,153,166,260,219,145,338,2161,266,177,126,147,177,153,327,171,156,252,165,144,154,173,165,156,144,183,178,137,357,165,310,173,292,156,206,113,208,204,102,183,159,151,180,629,154,167,124,188,99,228,151,161,141,171,168,165,109,209,159,135,165,159,174,144,153,165,203,97,169,113,165,138,108,51,110,197,179,93,21,84,96,62,290,214,	0,9033,10435,11589,13417,14931,18263,19516,21936,23800,26358,27790,29866,30272,33205,34223,42476,54707,58449,67565,80137,84481,86285,89807,91925,93219,96570,97316,99155,99739,102807,104034,108860,109704,110429,112094,112981,114420,115130,117846,120553,122850,127474,133193,133904,134947,140345,146369,147468,156402,160120,162291,171901,172273,178954,180182,186802,188144,188709,189001,195162,196394,197176,199551,200034,201791,203397,204271,204609,208043,212321,215154,217554,222394,225372,228931,230340,231576,231902,233038,236686,237628,240483,243160,245531,247285,247784,251350,254694,255089,259319,263987,265385,268593,269590,273829,275088,276932,277929,279451,282526,285327,287381,287872,291665,294700,297882,303694,306006,306518,308425,308795,312108,314254,319443,320388,322724,325771,327846,328938,329360,331899,333739,334199,337070,339910,341051,341666,343571,344295,349910,350614,361398,363148,366709,377055,380946,383514,388506,389324,389884,398772,404393,418273,506578,514951,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	152121686	152147763	chr6:152121686-152147763	0	-	152121686	152121686	8553170	8	990,59,93,1957,201,212,127,4141,	0,9033,10435,11589,14931,18263,19516,21936,
#Partially deleted in new
chr6	152121686	152168364	chr6:152121686-152168364	1	-	152122435	152168204	789624	17	990,59,93,213,129,201,212,127,143,334,192,138,183,151,188,163,252,	0,9033,10435,11589,13417,14931,18263,19516,21936,26358,27790,29866,30272,33205,34223,42476,46426,
#Partially deleted in new
chr6	152121768	152225837	chr6:152121768-152225837	0	-	152122640	152225837	789624	31	908,93,213,129,201,212,127,143,69,334,192,138,183,151,188,163,167,159,156,126,195,235,95,148,155,147,183,205,134,171,117,	0,10353,11507,13335,14849,18181,19434,21854,23718,26276,27708,29784,30190,33123,34141,42394,54625,58367,67483,80055,84399,86203,89725,91843,93137,96488,97234,99073,99657,102725,103952,
#Partially deleted in new
chr6	152121779	152179463	chr6:152121779-152179463	0	-	152121779	152121779	8553170	19	897,59,93,213,129,201,212,127,143,69,334,192,138,183,151,188,163,167,139,	0,8940,10342,11496,13324,14838,18170,19423,21843,23707,26265,27697,29773,30179,33112,34130,42383,54614,57545,
#Partially deleted in new
chr6	152121779	152318344	chr6:152121779-152318344	0	-	152121779	152121779	8553170	61	897,59,93,213,129,201,212,127,143,334,192,138,183,151,188,163,167,159,156,126,195,235,95,148,155,147,183,205,134,171,156,156,177,150,183,133,197,132,174,201,120,102,210,156,132,157,110,132,192,174,195,162,168,141,195,144,183,123,186,138,264,	0,8940,10342,11496,13324,14838,18170,19423,21843,26265,27697,29773,30179,33112,34130,42383,54614,58356,67472,80044,84388,86192,89714,91832,93126,96477,97223,99062,99646,102714,103941,108767,109611,110336,112001,112888,114327,115037,117753,120460,122757,127381,133100,133811,134854,140252,146276,147375,156309,160027,162198,171808,172180,178861,180089,186709,188055,188616,188908,195069,196301,
#Partially deleted in new
chr6	152121779	152311167	chr6:152121779-152311167	0	-	152121779	152121779	8553170	59	897,59,93,213,129,201,212,127,143,334,192,138,183,151,188,163,167,159,156,126,195,235,95,148,155,147,183,205,134,171,156,156,177,150,183,133,197,132,174,201,120,102,210,156,132,157,110,132,192,174,195,162,168,141,195,144,183,123,480,	0,8940,10342,11496,13324,14838,18170,19423,21843,26265,27697,29773,30179,33112,34130,42383,54614,58356,67472,80044,84388,86192,89714,91832,93126,96477,97223,99062,99646,102714,103941,108767,109611,110336,112001,112888,114327,115037,117753,120460,122757,127381,133100,133811,134854,140252,146276,147375,156309,160027,162198,171808,172180,178861,180089,186709,188055,188616,188908,
#Partially deleted in new
chr6	152121779	152168280	chr6:152121779-152168280	0	-	152121779	152121779	8553170	18	897,59,93,213,129,201,212,127,143,69,334,192,138,183,151,188,163,172,	0,8940,10342,11496,13324,14838,18170,19423,21843,23707,26265,27697,29773,30179,33112,34130,42383,46329,
#Partially deleted in new
chr6	152122356	152168351	chr6:152122356-152168351	1	-	152122435	152168204	789624	18	320,59,93,213,129,201,212,127,143,69,334,192,138,183,151,188,163,239,	0,8363,9765,10919,12747,14261,17593,18846,21266,23130,25688,27120,29196,29602,32535,33553,41806,45756,
#Partially deleted in new
chr6	152122604	152185411	chr6:152122604-152185411	0	-	152122604	152122604	8553170	18	72,93,213,129,201,212,127,143,334,192,138,183,151,188,163,167,159,138,	0,9517,10671,12499,14013,17345,18598,21018,25440,26872,28948,29354,32287,33305,41558,53789,57531,62669,
#Partially deleted in new
chr6	152147883	152149506	chr6:152147883-152149506	0	-	152147883	152147883	8553170	2	495,30,	0,1593,
#Partially deleted in new
chr6	152149598	152155426	chr6:152149598-152155426	0	-	152149598	152149598	8553170	5	70,138,183,151,40,	0,1954,2360,5293,5788,
#Deleted in new
chr6	152152064	152155395	chr6:152152064-152155395	0	-	152152064	152152064	8553170	2	77,504,	0,2827,
#Partially deleted in new
chr6	152255625	152268171	chr6:152255625-152268171	0	-	152255625	152255625	8553170	4	121,132,157,116,	0,1008,6406,12430,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	152277501	152302269	chr6:152277501-152302269	0	-	152277501	152277501	8553170	6	779,174,207,162,168,401,	0,4305,6476,16086,16458,24367,
#Partially deleted in new
chr6	152278102	152282042	chr6:152278102-152282042	0	-	152278102	152278102	8553170	2	178,236,	0,3704,
#Partially deleted in new
chr6	152283981	152302123	chr6:152283981-152302123	0	-	152283981	152302075	789624	4	191,162,168,255,	0,9606,9978,17887,
#Deleted in new
chr6	152293679	152302136	chr6:152293679-152302136	0	-	152293679	152302075	789624	4	70,168,141,268,	0,280,6961,8189,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	152315197	152334147	chr6:152315197-152334147	0	-	152315197	152315197	8553170	11	1789,183,153,153,166,260,219,145,338,2161,140,	0,2883,3665,6040,6523,8280,9886,10760,11098,14532,18810,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	152315221	152334147	chr6:152315221-152334147	1	-	152316815	152321885	789624	12	1765,183,153,318,153,166,260,219,145,338,2161,140,	0,2859,3641,4677,6016,6499,8256,9862,10736,11074,14508,18786,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr6	152335277	152381220	chr6:152335277-152381220	0	-	152335277	152335277	8553170	19	1740,126,147,177,168,153,327,171,156,318,165,144,154,173,2397,183,178,137,215,	0,3963,8803,11781,14890,15340,16749,17985,18311,19381,23095,24037,26892,29569,31940,37759,41103,41498,45728,
#Partially deleted in new
chr6	152366991	152381362	chr6:152366991-152381362	0	-	152367004	152381362	789624	7	391,156,144,183,178,137,357,	0,1980,2479,6045,9389,9784,14014,
#Partially deleted in new
chr6	152366996	152373136	chr6:152366996-152373136	0	-	152367004	152373136	789624	3	386,144,100,	0,2474,6040,
#Boundary problem: need 55, got 0, diff 55, mapped 0.0
chr6	152376064	152636683	chr6:152376064-152636683	0	-	152376064	152376064	8553170	55	848,357,165,310,173,292,156,206,113,208,204,102,183,159,151,180,629,154,167,124,188,99,228,151,161,141,171,168,165,109,209,159,135,165,159,174,144,153,165,203,97,169,113,165,138,108,110,197,179,93,84,96,62,290,46,	0,4941,9609,11007,14215,15212,19451,20710,22554,23551,25073,28148,30949,33003,33494,37287,40322,43504,49316,51628,52140,54047,54417,57730,59876,65065,66010,68346,71393,73468,74560,74982,77521,79361,79821,82692,85532,86673,87288,89193,89917,95532,96236,107020,108770,112331,126568,129136,134128,134946,144394,150015,163895,252200,260573,
#Deleted in new
chr6	152380545	152381564	chr6:152380545-152381564	3	+	152380545	152380545	789624	2	48,505,	0,514,
#Partially deleted in new
chr6	152401302	152409304	chr6:152401302-152409304	0	-	152401302	152401302	8553170	4	39,102,183,237,	0,2910,5711,7765,
#Partially deleted in new
chr6	152402397	152404966	chr6:152402397-152404966	3	+	152402397	152402397	8553170	2	270,115,	0,2454,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	152410274	152410394	chr6:152410274-152410394	7	+	152410274	152410274	16724991	1	120,	0,
#Partially deleted in new
chr6	152427603	152628331	chr6:152427603-152628331	1	-	152427614	152628331	0	36	213,188,99,228,151,161,141,171,168,165,109,209,159,135,165,159,174,144,153,165,203,97,169,113,165,138,108,51,110,197,179,93,84,96,62,67,	0,601,2508,2878,6191,8337,13526,14471,16807,19854,21929,23021,23443,25982,27822,28282,31153,33993,35134,35749,37654,38378,43993,44697,55481,57231,60792,71138,75029,77597,82589,83407,92855,98476,112356,200661,
#Partially deleted in new
chr6	152433524	152636883	chr6:152433524-152636883	1	-	152435918	152628331	789624	32	2577,141,171,168,165,109,209,159,135,165,159,174,144,153,165,203,97,169,113,165,138,108,110,197,179,93,21,84,96,62,290,246,	0,7605,8550,10886,13933,16008,17100,17522,20061,21901,22361,25232,28072,29213,29828,31733,32457,38072,38776,49560,51310,54871,69108,71676,76668,77486,78046,86934,92555,106435,194740,203113,
#Partially deleted in new
chr6	152435390	152628331	chr6:152435390-152628331	1	-	152435918	152628331	0	31	711,141,171,168,165,109,209,159,135,165,159,174,144,153,165,203,97,169,113,165,138,108,51,110,197,179,93,84,96,62,67,	0,5739,6684,9020,12067,14142,15234,15656,18195,20035,20495,23366,26206,27347,27962,29867,30591,36206,36910,47694,49444,53005,63351,67242,69810,74802,75620,85068,90689,104569,192874,
#Partially deleted in new
chr6	152453415	152472630	chr6:152453415-152472630	1	-	152453474	152472621	789624	12	305,165,159,174,144,153,165,203,97,169,113,60,	0,2010,2470,5341,8181,9322,9937,11842,12566,18181,18885,19155,
#Partially deleted in new
chr6	152453416	152472617	chr6:152453416-152472617	0	-	152471642	152472617	789624	12	304,165,159,174,144,153,165,203,97,74,113,47,	0,2009,2469,5340,8180,9321,9936,11841,12565,18180,18884,19154,
#Partially deleted in new
chr6	152458756	152483237	chr6:152458756-152483237	0	-	152458756	152458756	8553170	10	174,144,153,165,203,97,169,113,17,153,	0,2840,3981,4596,6501,7225,12840,13544,22399,24328,
#Deleted in new
chr6	152461615	152464932	chr6:152461615-152464932	0	-	152461615	152461615	8553170	4	125,153,165,135,	0,1122,1737,3182,
#Partially deleted in new
chr6	152462529	152628483	chr6:152462529-152628483	1	-	152462722	152628331	789624	18	361,165,203,97,169,113,165,138,108,51,110,197,179,93,84,96,62,219,	0,823,2728,3452,9067,9771,20555,22305,25866,36212,40103,42671,47663,48481,57929,63550,77430,165735,
#Partially deleted in new
chr6	152463475	152471995	chr6:152463475-152471995	0	-	152463475	152463475	8553170	5	42,203,97,74,169,	0,1782,2506,8121,8351,
#Partially deleted in new
chr6	152465257	152472519	chr6:152465257-152472519	0	-	152465257	152465257	8553170	4	203,97,169,219,	0,724,6339,7043,
#Partially deleted in new
chr6	152465292	152637801	chr6:152465292-152637801	0	-	152465292	152628331	789624	17	168,97,169,113,165,138,108,110,197,179,93,84,96,62,290,168,613,	0,689,6304,7008,17792,19542,23103,37340,39908,44900,45718,55166,60787,74667,162972,171345,171896,
#Partially deleted in new
chr6	152478516	152636683	chr6:152478516-152636683	1	-	152478516	152628280	789624	15	114,165,138,108,51,110,197,179,93,21,84,96,62,290,46,	0,4568,6318,9879,20225,24116,26684,31676,32494,33054,41942,47563,61443,149748,158121,
#Deleted in new
chr6	152545929	152546984	chr6:152545929-152546984	3	+	152545929	152545929	8553170	2	131,596,	0,459,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	152697894	152724567	chr6:152697894-152724567	3	+	152697902	152722253	789624	2	204,2826,	0,23847,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	152697896	152723284	chr6:152697896-152723284	1	+	152697902	152722770	789624	2	202,522,	0,24866,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	152697960	152724501	chr6:152697960-152724501	0	+	152697960	152722253	789624	3	138,512,1739,	0,23781,24802,
#Partially deleted in new
chr6	152705734	152706128	chr6:152705734-152706128	7	+	152705734	152705734	16724991	1	394,	0,
#Partially deleted in new
chr6	152750797	152759765	chr6:152750797-152759765	1	+	152752177	152757141	0	7	162,117,123,105,129,89,856,	0,1370,3368,4471,5339,6298,8112,
#Partially deleted in new
chr6	152750797	152759765	chr6:152750797-152759765	3	+	152752177	152757141	0	7	162,117,123,105,132,89,856,	0,1370,3368,4471,5336,6298,8112,
#Partially deleted in new
chr6	152754210	152759765	chr6:152754210-152759765	0	+	152754210	152757141	789624	5	78,105,132,86,856,	0,1058,1923,2888,4699,
#Partially deleted in new
chr6	152794495	152831913	chr6:152794495-152831913	3	-	152794495	152794495	8553170	3	259,123,60,	0,10510,37358,
#Partially deleted in new
chr6	152804752	152805128	chr6:152804752-152805128	1	-	152804752	152804752	8553170	2	121,123,	0,253,
#Deleted in new
chr6	152898046	152899280	chr6:152898046-152899280	7	+	152898046	152898046	16724991	1	1234,	0,
#Partially deleted in new
chr6	152959358	152959605	chr6:152959358-152959605	7	-	152959358	152959358	16724991	1	247,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	152970518	152973985	chr6:152970518-152973985	0	-	152970518	152970518	8553170	2	896,1714,	0,1753,
#Partially deleted in new
chr6	152970528	152983018	chr6:152970528-152983018	3	-	152971162	152982959	0	5	886,183,91,715,162,	0,1743,2517,4378,12328,
#Partially deleted in new
chr6	152970528	152983579	chr6:152970528-152983579	1	-	152971162	152975586	0	5	886,183,91,715,346,	0,1743,2517,4378,12705,
#Partially deleted in new
chr6	152983330	152990541	chr6:152983330-152990541	3	+	152983330	152983330	8553170	3	157,67,1866,	0,4625,5345,
#Partially deleted in new
chr6	152983749	152989223	chr6:152983749-152989223	0	+	152983749	152983749	8553170	3	56,59,548,	0,4206,4926,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	152987361	153002685	chr6:152987361-153002685	1	-	152990084	153002685	789624	6	2734,118,164,76,80,259,	0,5495,7151,7882,11188,15065,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	152987361	153002685	chr6:152987361-153002685	1	-	152990084	153002685	789624	6	2734,118,164,184,80,259,	0,5495,7151,7774,11188,15065,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	152987361	153002685	chr6:152987361-153002685	3	-	152989894	153002685	789624	7	2734,137,118,164,184,80,259,	0,3823,5495,7151,7774,11188,15065,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	152987361	152995319	chr6:152987361-152995319	0	-	152989894	152995319	789624	5	2734,137,118,164,76,	0,3823,5495,7151,7882,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	152987361	152994642	chr6:152987361-152994642	0	-	152987361	152987361	8553170	4	2734,232,118,130,	0,3823,5495,7151,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	152987361	153002685	chr6:152987361-153002685	0	-	152987361	152987361	8553170	7	2734,137,118,164,159,80,259,	0,3823,5495,7151,7774,11188,15065,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	152987361	153002685	chr6:152987361-153002685	0	-	152987361	152987361	789624	6	2734,118,164,159,80,259,	0,5495,7151,7774,11188,15065,
#Partially deleted in new
chr6	152991184	153002685	chr6:152991184-153002685	0	-	152991184	152991184	8553170	6	137,118,164,57,80,259,	0,1672,3328,4078,7365,11242,
#Partially deleted in new
chr6	152991184	152998742	chr6:152991184-152998742	0	-	152991184	152991184	8553170	5	137,118,164,57,193,	0,1672,3328,4078,7365,
#Partially deleted in new
chr6	152991227	152994808	chr6:152991227-152994808	0	-	152991227	152994791	789624	3	94,118,296,	0,1629,3285,
#Partially deleted in new
chr6	152998292	153002536	chr6:152998292-153002536	0	-	152998292	152998292	8553170	2	337,110,	0,4134,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	153004458	153044043	chr6:153004458-153044043	1	-	153011573	153044018	0	4	7304,235,90,144,	0,19803,21995,39441,
#Partially deleted in new
chr6	153010721	153131249	chr6:153010721-153131249	3	-	153011573	153044018	0	5	1041,235,90,144,126,	0,13540,15732,33178,120402,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	153159219	153159345	chr6:153159219-153159345	7	-	153159219	153159219	16724991	1	126,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	153231319	153347488	chr6:153231319-153347488	3	+	153231319	153231319	8553170	3	117,52,1043,	0,36913,115126,
#Deleted in new
chr6	153282286	153282733	chr6:153282286-153282733	7	-	153282286	153282286	16724991	1	447,	0,
#Partially deleted in new
chr6	153304594	153308982	chr6:153304594-153308982	3	-	153304594	153304594	8553170	3	220,74,144,	0,3154,4244,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	153420437	153420572	chr6:153420437-153420572	7	+	153420437	153420437	16724991	1	135,	0,
#Partially deleted in new
chr6	153665706	153666390	chr6:153665706-153666390	7	+	153665706	153665706	16724991	1	684,	0,
#Partially deleted in new
chr6	153666465	153666666	chr6:153666465-153666666	7	+	153666465	153666465	16724991	1	201,	0,
#Partially deleted in new
chr6	153666626	153667318	chr6:153666626-153667318	7	+	153666626	153666626	16724991	1	692,	0,
#Partially deleted in new
chr6	153667317	153668106	chr6:153667317-153668106	7	+	153667317	153667317	16724991	1	789,	0,
#Partially deleted in new
chr6	153668176	153668362	chr6:153668176-153668362	7	+	153668176	153668176	16724991	1	186,	0,
#Partially deleted in new
chr6	153668588	153668858	chr6:153668588-153668858	7	+	153668588	153668588	16724991	1	270,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	153668878	153669901	chr6:153668878-153669901	7	+	153668878	153668878	16724991	1	1023,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	153681446	153681553	chr6:153681446-153681553	3	+	153681446	153681446	8553170	1	107,	0,
#Partially deleted in new
chr6	153938432	153938992	chr6:153938432-153938992	7	-	153938432	153938432	16724991	1	560,	0,
#Partially deleted in new
chr6	154010495	154089879	chr6:154010495-154089879	0	+	154011008	154089879	789624	3	523,424,54,	0,28915,79330,
#Partially deleted in new
chr6	154010500	154118754	chr6:154010500-154118754	1	+	154039160	154118721	789624	6	518,145,424,353,521,72,	0,28660,28910,79325,80451,108182,
#Partially deleted in new
chr6	154010500	154118809	chr6:154010500-154118809	1	+	154010512	154118721	789624	4	59,353,521,127,	0,79325,80451,108182,
#Partially deleted in new
chr6	154010500	154118809	chr6:154010500-154118809	1	+	154089835	154118721	789624	4	518,353,521,127,	0,79325,80451,108182,
#Partially deleted in new
chr6	154039101	154091938	chr6:154039101-154091938	1	+	154039358	154091889	789624	4	733,353,521,130,	0,50724,51850,52707,
#Partially deleted in new
chr6	154039307	154119459	chr6:154039307-154119459	1	+	154039544	154118721	789624	4	527,353,521,777,	0,50518,51644,79375,
#Partially deleted in new
chr6	154039348	154091593	chr6:154039348-154091593	1	+	154039544	154091487	789624	3	486,353,642,	0,50477,51603,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	154039363	154074458	chr6:154039363-154074458	0	+	154039363	154039363	8553170	3	471,122,944,	0,7330,34151,
#Partially deleted in new
chr6	154039455	154110453	chr6:154039455-154110453	1	+	154039544	154110411	789624	4	379,353,521,99,	0,50370,51496,70899,
#Partially deleted in new
chr6	154039474	154118807	chr6:154039474-154118807	0	+	154039544	154094254	789624	5	360,353,521,109,125,	0,50351,51477,54735,79208,
#Partially deleted in new
chr6	154039478	154246860	chr6:154039478-154246860	2	+	154039544	154091222	789624	3	356,521,168,	0,51473,207214,
#Partially deleted in new
chr6	154039494	154093520	chr6:154039494-154093520	1	+	154039544	154093446	789624	4	340,353,521,251,	0,50331,51457,53775,
#Partially deleted in new
chr6	154039494	154246867	chr6:154039494-154246867	1	+	154039544	154246785	789624	4	340,353,521,175,	0,50331,51457,207198,
#Partially deleted in new
chr6	154039494	154109018	chr6:154039494-154109018	1	+	154039544	154107795	789624	4	340,353,521,1271,	0,50331,51457,68253,
#Partially deleted in new
chr6	154039494	154107652	chr6:154039494-154107652	1	+	154039544	154107563	789624	4	340,353,521,188,	0,50331,51457,67970,
#Partially deleted in new
chr6	154039494	154109018	chr6:154039494-154109018	1	+	154039544	154108045	789624	4	340,353,521,1003,	0,50331,51457,68521,
#Partially deleted in new
chr6	154039494	154109018	chr6:154039494-154109018	0	+	154039544	154094254	789624	5	340,353,521,109,1271,	0,50331,51457,54715,68253,
#Partially deleted in new
chr6	154039494	154107652	chr6:154039494-154107652	1	+	154039544	154107621	789624	4	340,353,521,37,	0,50331,51457,68121,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	154083489	154118713	chr6:154083489-154118713	0	+	154083489	154083489	8553170	4	222,353,521,31,	0,6336,7462,35193,
#Partially deleted in new
chr6	154086506	154118969	chr6:154086506-154118969	1	+	154089835	154118721	789624	4	1298,353,521,287,	0,3319,4445,32176,
#Partially deleted in new
chr6	154086506	154118969	chr6:154086506-154118969	1	+	154089835	154118721	789624	4	1279,353,521,287,	0,3319,4445,32176,
#Deleted in new
chr6	154089761	154091938	chr6:154089761-154091938	0	+	154089761	154089761	8553170	2	417,987,	0,1190,
#Deleted in new
chr6	154089825	154091957	chr6:154089825-154091957	0	+	154089825	154089825	8553170	3	353,521,149,	0,1126,1983,
#Partially deleted in new
chr6	154154495	154159516	chr6:154154495-154159516	0	-	154154495	154154495	8553170	2	157,341,	0,4680,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	154154608	154356766	chr6:154154608-154356766	3	-	154159827	154265947	0	12	5432,194,373,86,59,72,74,170,37,53,44,95,	0,13311,45059,58161,59609,66648,68561,91982,92840,111303,135104,202063,
#Partially deleted in new
chr6	154158073	154330081	chr6:154158073-154330081	1	-	154159827	154265947	0	13	1967,194,373,86,59,72,74,170,40,53,44,74,61,	0,9846,41594,54696,56144,63183,65096,88517,89375,107838,131639,148621,171947,
#Partially deleted in new
chr6	154158923	154213330	chr6:154158923-154213330	0	-	154158923	154158923	8553170	4	1117,194,373,561,	0,8996,40744,53846,
#Partially deleted in new
chr6	154159611	154356735	chr6:154159611-154356735	1	-	154159827	154265947	0	12	429,194,373,86,59,72,74,170,40,53,44,64,	0,8308,40056,53158,54606,61645,63558,86979,87837,106300,130101,197060,
#Partially deleted in new
chr6	154159681	154247682	chr6:154159681-154247682	1	-	154159827	154246749	789624	9	359,194,373,86,59,72,74,170,234,	0,8238,39986,53088,54536,61575,63488,86909,87767,
#Partially deleted in new
chr6	154199722	154219189	chr6:154199722-154219189	0	-	154199722	154199722	8553170	4	318,86,59,144,	0,13047,14495,19323,
#Partially deleted in new
chr6	154199828	154214313	chr6:154199828-154214313	0	-	154199828	154199828	8553170	3	212,86,96,	0,12941,14389,
#Partially deleted in new
chr6	154200017	154246856	chr6:154200017-154246856	0	-	154200017	154246749	789624	6	23,86,59,72,74,266,	0,12752,14200,21239,23152,46573,
#Partially deleted in new
chr6	154212834	154247231	chr6:154212834-154247231	0	-	154212834	154246749	789624	6	21,59,72,74,170,162,	0,1383,8422,10335,33756,34235,
#Partially deleted in new
chr6	154214256	154247422	chr6:154214256-154247422	0	-	154214256	154246749	789624	5	20,72,74,170,232,	0,7000,8913,32334,32934,
#Deleted in new
chr6	154216930	154217489	chr6:154216930-154217489	7	+	154216930	154216930	16724991	1	559,	0,
#Partially deleted in new
chr6	154222960	154247580	chr6:154222960-154247580	0	-	154222960	154222960	8553170	3	283,170,132,	0,23630,24488,
#Partially deleted in new
chr6	154246598	154356792	chr6:154246598-154356792	0	-	154246598	154265947	789624	6	162,37,53,44,68,121,	0,850,19313,43114,60096,110073,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	154387503	154510659	chr6:154387503-154510659	3	-	154406353	154510114	789624	13	19149,90,209,125,147,69,60,120,42,88,203,164,597,	0,22839,23430,26795,35002,35411,40624,42968,45962,53788,54584,62591,122559,
#Partially deleted in new
chr6	154405462	154434073	chr6:154405462-154434073	0	-	154405462	154405462	8553170	10	1190,90,209,125,147,69,60,120,42,295,	0,4880,5471,8836,17043,17452,22665,25009,28003,28316,
#Partially deleted in new
chr6	154406109	154478491	chr6:154406109-154478491	1	-	154406353	154442266	8553170	13	543,90,209,125,147,69,60,120,42,88,203,164,163,	0,4233,4824,8189,16396,16805,22018,24362,27356,35182,35978,43985,72219,
#Partially deleted in new
chr6	154410962	154430495	chr6:154410962-154430495	0	-	154410962	154430495	789624	5	180,125,147,60,24,	0,3336,11543,17165,19509,
#Partially deleted in new
chr6	154414722	154434073	chr6:154414722-154434073	0	-	154414722	154414722	8553170	7	43,147,69,60,120,42,295,	0,7783,8192,13405,15749,18743,19056,
#Deleted in new
chr6	154542551	154542740	chr6:154542551-154542740	7	+	154542551	154542551	16724991	1	189,	0,
#Deleted in new
chr6	154549516	154550242	chr6:154549516-154550242	7	+	154549516	154549516	16724991	1	726,	0,
#Deleted in new
chr6	154576308	154577079	chr6:154576308-154577079	7	+	154576308	154576308	16724991	1	771,	0,
#Deleted in new
chr6	154605615	154605954	chr6:154605615-154605954	7	-	154605615	154605615	16724991	1	339,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	154706642	154707795	chr6:154706642-154707795	7	+	154706642	154706642	16724991	1	1153,	0,
#Partially deleted in new
chr6	154733324	154834060	chr6:154733324-154834060	3	+	154733900	154833395	0	20	606,84,45,162,154,131,177,80,118,132,113,194,101,114,157,134,145,69,219,2122,	0,40664,44676,54536,59498,61684,68646,70219,72044,74745,75361,76690,82391,85154,86852,88951,90909,93847,97597,98614,
#Partially deleted in new
chr6	154733377	154834244	chr6:154733377-154834244	1	+	154733422	154833395	0	22	126,84,63,84,45,162,154,131,177,80,118,132,113,194,101,114,157,134,145,69,219,2306,	0,469,8578,40611,44623,54483,59445,61631,68593,70166,71991,74692,75308,76637,82338,85101,86799,88898,90856,93794,97544,98561,
#Partially deleted in new
chr6	154733377	154834244	chr6:154733377-154834244	1	+	154733422	154833395	789624	21	173,136,84,45,162,154,131,177,80,118,132,113,194,101,114,157,134,145,69,219,2306,	0,417,40611,44623,54483,59445,61631,68593,70166,71991,74692,75308,76637,82338,85101,86799,88898,90856,93794,97544,98561,
#Partially deleted in new
chr6	154733377	154792946	chr6:154733377-154792946	0	+	154733377	154733377	8553170	6	126,136,84,45,162,124,	0,417,40611,44623,54483,59445,
#Partially deleted in new
chr6	154733852	154792858	chr6:154733852-154792858	0	+	154733852	154733852	8553170	6	78,63,84,45,162,36,	0,8103,40136,44148,54008,58970,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	154825175	154825279	chr6:154825175-154825279	3	-	154825175	154825175	8553170	1	104,	0,
#Partially deleted in new
chr6	154832696	155257723	chr6:154832696-155257723	3	+	155129223	155257121	789624	29	713,261,91,91,111,1200,436,173,225,186,147,162,105,79,93,264,104,180,69,126,109,180,119,109,59,106,88,155,1240,	0,28041,111419,257592,294793,296521,304480,311909,315413,331718,332566,344119,346342,346681,349529,350540,378507,407833,411314,411961,412926,415303,417154,418216,419248,420251,421276,421722,423787,
#Partially deleted in new
chr6	154833344	154961479	chr6:154833344-154961479	0	+	154833344	154833344	8553170	4	65,261,91,351,	0,27393,110771,127784,
#Partially deleted in new
chr6	154833354	154908868	chr6:154833354-154908868	0	+	154833354	154833354	8553170	2	55,1139,	0,74375,
#Deleted in new
chr6	154845073	154845620	chr6:154845073-154845620	7	-	154845073	154845073	16724991	1	547,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	154853359	154853436	chr6:154853359-154853436	3	+	154853359	154853359	5263520	1	77,	0,
#Partially deleted in new
chr6	154863010	154908866	chr6:154863010-154908866	0	+	154863010	154863010	8553170	2	888,1137,	0,44719,
#Deleted in new
chr6	154905075	154905206	chr6:154905075-154905206	3	-	154905075	154905075	8553170	1	131,	0,
#Partially deleted in new
chr6	154995353	155129382	chr6:154995353-155129382	0	+	155129223	155129382	789624	4	139,91,111,165,	0,94935,132136,133864,
#Deleted in new
chr6	155004834	155005318	chr6:155004834-155005318	7	-	155004834	155004834	16724991	3	57,157,105,	0,150,379,
#Partially deleted in new
chr6	155013645	155129479	chr6:155013645-155129479	0	+	155129223	155129479	789624	4	178,91,111,262,	0,76643,113844,115572,
#Partially deleted in new
chr6	155013763	155129384	chr6:155013763-155129384	0	+	155129223	155129384	789624	5	60,121,91,111,167,	0,2477,76525,113726,115454,
#Partially deleted in new
chr6	155013921	155251985	chr6:155013921-155251985	0	+	155129223	155251985	789624	23	95,91,111,1200,436,173,225,186,147,162,105,79,93,264,104,180,69,126,109,180,119,109,41,	0,76367,113568,115296,123255,130684,134188,150493,151341,162894,165117,165456,168304,169315,197282,226608,230089,230736,231701,234078,235929,236991,238023,
#Partially deleted in new
chr6	155121915	155129810	chr6:155121915-155129810	0	+	155129223	155129810	789624	3	173,111,593,	0,5574,7302,
#Partially deleted in new
chr6	155129171	155257662	chr6:155129171-155257662	1	+	155129223	155257121	789624	25	1246,436,173,225,186,147,72,162,105,79,93,264,104,180,69,126,109,180,119,109,59,106,88,155,1179,	0,8005,15434,18938,35243,36091,39673,47644,49867,50206,53054,54065,82032,111358,114839,115486,116451,118828,120679,121741,122773,123776,124801,125247,127312,
#Partially deleted in new
chr6	155129223	155257190	chr6:155129223-155257190	1	+	155129223	155257121	789624	25	1194,436,173,225,186,147,162,105,79,93,264,104,180,69,126,109,180,119,87,109,59,106,88,155,707,	0,7953,15382,18886,35191,36039,47592,49815,50154,53002,54013,81980,111306,114787,115434,116399,118776,120627,121314,121689,122721,123724,124749,125195,127260,
#Partially deleted in new
chr6	155149108	155257200	chr6:155149108-155257200	1	+	155164450	155257121	789624	21	118,186,147,162,105,79,93,264,104,180,69,126,109,180,119,109,59,106,88,155,717,	0,15306,16154,27707,29930,30269,33117,34128,62095,91421,94902,95549,96514,98891,100742,101804,102836,103839,104864,105310,107375,
#Partially deleted in new
chr6	155149120	155257190	chr6:155149120-155257190	1	+	155164450	155257121	789624	22	106,186,147,72,162,105,79,93,264,104,180,69,126,109,180,119,109,59,106,88,155,731,	0,15294,16142,19724,27695,29918,30257,33105,34116,62083,91409,94890,95537,96502,98879,100730,101792,102824,103827,104852,105298,107339,
#Partially deleted in new
chr6	155183314	155245636	chr6:155183314-155245636	0	+	155183314	155240537	789624	5	186,180,69,126,14,	0,57215,60696,61343,62308,
#Partially deleted in new
chr6	155211225	155232903	chr6:155211225-155232903	0	+	155211225	155211225	8553170	2	82,372,	0,21306,
#Partially deleted in new
chr6	155216636	155257220	chr6:155216636-155257220	1	+	155240586	155257121	789624	13	454,180,69,126,109,180,119,109,59,106,88,155,737,	0,23893,27374,28021,28986,31363,33214,34276,35308,36311,37336,37782,39847,
#Partially deleted in new
chr6	155216965	155248002	chr6:155216965-155248002	0	+	155217079	155248002	789624	6	125,151,69,126,109,3,	0,23593,27045,27692,28657,31034,
#Partially deleted in new
chr6	155216965	155244830	chr6:155216965-155244830	0	+	155216965	155216965	8553170	4	125,180,69,173,	0,23564,27045,27692,
#Partially deleted in new
chr6	155252918	155256686	chr6:155252918-155256686	0	+	155252918	155252918	8553170	4	135,88,155,203,	0,1054,1500,3565,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	155253138	155256724	chr6:155253138-155256724	3	-	155253138	155253138	8553170	2	626,2462,	0,1124,
#Partially deleted in new
chr6	155257508	155314484	chr6:155257508-155314484	3	-	155257835	155314428	789624	7	574,128,120,152,109,152,189,	0,2764,27649,39444,40968,53679,56787,
#Partially deleted in new
chr6	155257652	155297069	chr6:155257652-155297069	0	-	155257652	155257652	8553170	4	256,128,120,117,	0,2620,27505,39300,
#Partially deleted in new
chr6	155257672	155314484	chr6:155257672-155314484	0	-	155257672	155257672	8553170	3	236,8,189,	0,53659,56623,
#Partially deleted in new
chr6	155257976	155285199	chr6:155257976-155285199	0	-	155257976	155257976	8553170	3	106,296,42,	0,2296,27181,
#Partially deleted in new
chr6	155260822	155299542	chr6:155260822-155299542	0	-	155260822	155260822	8553170	5	145,120,152,109,37,	0,24335,36130,37654,38683,
#Partially deleted in new
chr6	155264012	155276548	chr6:155264012-155276548	3	+	155275719	155276379	789624	2	276,933,	0,11603,
#Partially deleted in new
chr6	155296960	155303498	chr6:155296960-155303498	0	-	155296960	155296960	8553170	3	144,109,325,	0,1516,6213,
#Partially deleted in new
chr6	155310845	155314450	chr6:155310845-155314450	0	-	155310845	155310845	8553170	2	494,155,	0,3450,
#Partially deleted in new
chr6	155311176	155314427	chr6:155311176-155314427	0	-	155311176	155311176	8553170	2	163,311,	0,2940,
#Deleted in new
chr6	155380510	155381183	chr6:155380510-155381183	3	-	155380510	155380510	8553170	2	495,59,	0,614,
#Partially deleted in new
chr6	155395369	155455903	chr6:155395369-155455903	3	-	155396835	155455800	789624	14	205,154,125,147,163,254,93,130,182,146,85,111,96,151,	0,1439,11760,15844,27324,33424,35473,41048,44586,47903,58034,59441,59664,60383,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	155654962	155655026	chr6:155654962-155655026	3	-	155654962	155654962	8553170	1	64,	0,
#Partially deleted in new
chr6	155946796	155946879	chr6:155946796-155946879	3	+	155946796	155946796	5263520	1	83,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	156350578	156390246	chr6:156350578-156390246	3	+	156350578	156350578	8553170	4	132,170,131,1571,	0,1272,2077,38097,
#Deleted in new
chr6	156378749	156378824	chr6:156378749-156378824	3	+	156378749	156378749	5263520	1	75,	0,
#Partially deleted in new
chr6	156493225	156499771	chr6:156493225-156499771	3	-	156493225	156493225	8553170	3	303,192,38,	0,5619,6508,
#Partially deleted in new
chr6	156497745	156498966	chr6:156497745-156498966	1	-	156497745	156497745	8553170	2	278,122,	0,1099,
#Deleted in new
chr6	156662049	156662437	chr6:156662049-156662437	7	+	156662049	156662049	16724991	1	388,	0,
#Deleted in new
chr6	156774216	156774662	chr6:156774216-156774662	3	-	156774216	156774216	8553170	1	446,	0,
#Partially deleted in new
chr6	156776019	157210779	chr6:156776019-157210779	1	+	156777680	157207891	0	21	107,2610,195,39,150,111,244,90,180,328,146,110,210,205,139,173,151,97,784,131,4613,	0,842,53207,95594,125356,159446,308642,334452,357008,372604,391020,397988,404949,408211,413622,414018,420145,422791,424685,427846,430147,
#Deleted in new
chr6	156776359	156778422	chr6:156776359-156778422	3	-	156776359	156776359	8553170	2	1072,177,	0,1886,
#Partially deleted in new
chr6	156777929	157209142	chr6:156777929-157209142	3	+	156777929	157207891	0	19	1542,195,150,111,244,90,180,328,146,110,210,205,139,173,151,97,784,131,2976,	0,51297,123446,157536,306732,332542,355098,370694,389110,396078,403039,406301,411712,412108,418235,420881,422775,425936,428237,
#Partially deleted in new
chr6	156777929	157209267	chr6:156777929-157209267	1	+	156777929	157207891	0	20	1542,195,150,111,244,90,180,328,146,110,159,210,205,139,173,151,97,784,131,3101,	0,51297,123446,157536,306732,332542,355098,370694,389110,396078,396917,403039,406301,411712,412108,418235,420881,422775,425936,428237,
#Partially deleted in new
chr6	156777929	157210777	chr6:156777929-157210777	1	+	156777929	157207891	789624	20	1542,195,39,150,111,244,90,180,328,146,110,210,205,139,173,151,97,784,131,4611,	0,51297,93684,123446,157536,306732,332542,355098,370694,389110,396078,403039,406301,411712,412108,418235,420881,422775,425936,428237,
#Partially deleted in new
chr6	156779399	156870527	chr6:156779399-156870527	0	+	156779399	156870125	789624	3	72,195,429,	0,49827,90699,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	156779399	156943901	chr6:156779399-156943901	0	+	156779399	156935609	789624	4	72,195,150,8436,	0,49827,121976,156066,
#Partially deleted in new
chr6	156779399	156829730	chr6:156779399-156829730	0	+	156779399	156779399	8553170	2	72,504,	0,49827,
#Partially deleted in new
chr6	156779417	156870276	chr6:156779417-156870276	0	+	156779417	156870125	789624	3	54,195,157,	0,49809,90702,
#Partially deleted in new
chr6	156779432	157209142	chr6:156779432-157209142	0	+	156779432	157207891	789624	19	39,195,150,111,244,180,328,146,110,159,210,205,139,173,151,97,784,131,2976,	0,49794,121943,156033,305229,353595,369191,387607,394575,395414,401536,404798,410209,410605,416732,419378,421272,424433,426734,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	156779463	156985644	chr6:156779463-156985644	0	+	156779463	156984818	789624	5	8,195,150,111,937,	0,49763,121912,156002,205244,
#Deleted in new
chr6	156779677	156779731	chr6:156779677-156779731	3	-	156779677	156779677	5263520	1	54,	0,
#Deleted in new
chr6	156780326	156780455	chr6:156780326-156780455	3	-	156780326	156780326	8553170	1	129,	0,
#Partially deleted in new
chr6	156829372	156902150	chr6:156829372-156902150	0	+	156829372	156829372	8553170	2	49,775,	0,72003,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	156829409	156936673	chr6:156829409-156936673	0	+	156829409	156936510	789624	4	12,150,111,172,	0,71966,106056,107092,
#Partially deleted in new
chr6	156901375	157186620	chr6:156901375-157186620	0	+	156901375	157186605	789624	12	150,111,244,90,180,328,146,110,159,210,205,266,	0,34090,183286,209096,231652,247248,265664,272632,273471,279593,282855,284979,
#Partially deleted in new
chr6	156935470	157152404	chr6:156935470-157152404	0	+	156935470	156935470	8553170	6	106,42,244,90,180,3781,	0,101364,149191,175001,197557,213153,
#Partially deleted in new
chr6	156935544	157072575	chr6:156935544-157072575	0	+	156935544	157071187	789624	3	32,42,1394,	0,101290,135637,
#Partially deleted in new
chr6	156976293	156977072	chr6:156976293-156977072	7	+	156976293	156976293	16724991	2	120,258,	0,521,
#Partially deleted in new
chr6	157022285	157208694	chr6:157022285-157208694	1	+	157110479	157207891	789624	17	293,42,244,90,328,146,110,159,210,205,139,173,151,97,784,131,2528,	0,14549,62376,88186,126338,144754,151722,152561,158683,161945,167356,167752,173879,176525,178419,181580,183881,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	157022497	157024752	chr6:157022497-157024752	0	+	157022497	157022497	8553170	1	2255,	0,
#Partially deleted in new
chr6	157030305	157141277	chr6:157030305-157141277	1	+	157110479	157140644	789624	6	69,42,244,90,180,665,	0,6529,54356,80166,102722,110307,
#Partially deleted in new
chr6	157036314	157208683	chr6:157036314-157208683	1	+	157110479	157207891	789624	18	207,42,244,90,180,328,146,110,159,210,205,139,173,151,97,784,131,2517,	0,520,48347,74157,96713,112309,130725,137693,138532,144654,147916,153327,153723,159850,162496,164390,167551,169852,
#Partially deleted in new
chr6	157084765	157111305	chr6:157084765-157111305	0	+	157084765	157084765	8553170	2	140,834,	0,25706,
#Partially deleted in new
chr6	157084771	157208361	chr6:157084771-157208361	1	+	157110479	157207891	0	15	134,90,180,328,146,110,210,205,139,173,151,97,784,131,2195,	0,25700,48256,63852,82268,89236,96197,99459,104870,105266,111393,114039,115933,119094,121395,
#Partially deleted in new
chr6	157107726	157119706	chr6:157107726-157119706	3	-	157107726	157107726	8553170	2	290,133,	0,11847,
#Partially deleted in new
chr6	157148623	157208688	chr6:157148623-157208688	0	+	157148623	157207891	789624	14	328,129,146,110,159,210,205,139,173,151,97,784,131,2522,	0,2101,18416,25384,26223,32345,35607,41018,41414,47541,50187,52081,55242,57543,
#Partially deleted in new
chr6	157148728	157168275	chr6:157148728-157168275	0	+	157148728	157148728	8553170	2	253,1236,	0,18311,
#Partially deleted in new
chr6	157148819	157208100	chr6:157148819-157208100	0	+	157148819	157164666	789624	15	132,129,110,146,110,159,210,205,139,173,151,97,784,131,1934,	0,1905,15819,18220,25188,26027,32149,35411,40822,41218,47345,49991,51885,55046,57347,
#Partially deleted in new
chr6	157148907	157207868	chr6:157148907-157207868	0	+	157148907	157207868	789624	13	44,146,110,159,210,205,139,170,151,97,784,131,1702,	0,18132,25100,25939,32061,35323,40734,41133,47257,49903,51797,54958,57259,
#Partially deleted in new
chr6	157148910	157186610	chr6:157148910-157186610	0	+	157148910	157184545	789624	5	41,146,110,210,2380,	0,18129,25097,32058,35320,
#Deleted in new
chr6	157166014	157170249	chr6:157166014-157170249	0	+	157166014	157166014	8553170	1	4235,	0,
#Partially deleted in new
chr6	157170049	157208021	chr6:157170049-157208021	0	+	157170049	157170049	8553170	11	60,110,210,205,139,173,151,97,784,131,1855,	0,3958,10919,14181,19592,19988,26115,28761,30655,33816,36117,
#Partially deleted in new
chr6	157172775	157208685	chr6:157172775-157208685	0	+	157172775	157172775	8553170	11	1342,159,210,205,139,173,151,97,784,131,2519,	0,2071,8193,11455,16866,17262,23389,26035,27929,31090,33391,
#Deleted in new
chr6	157173500	157174331	chr6:157173500-157174331	0	+	157173500	157173500	8553170	1	831,	0,
#Partially deleted in new
chr6	157173984	157180994	chr6:157173984-157180994	0	+	157173984	157173984	8553170	3	133,159,26,	0,862,6984,
#Deleted in new
chr6	157174846	157175840	chr6:157174846-157175840	0	+	157174846	157174846	8553170	1	994,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	157193470	157208695	chr6:157193470-157208695	0	+	157193470	157193470	8553170	5	2845,97,784,131,2529,	0,5340,7234,10395,12696,
#Partially deleted in new
chr6	157198508	157208700	chr6:157198508-157208700	0	+	157198508	157198508	8553170	4	399,784,131,2534,	0,2196,5357,7658,
#Deleted in new
chr6	157203657	157208700	chr6:157203657-157208700	0	+	157203657	157203657	8553170	1	5043,	0,
#Deleted in new
chr6	157206616	157209150	chr6:157206616-157209150	0	+	157206616	157208538	789624	2	875,676,	0,1858,
#Partially deleted in new
chr6	157289385	157323601	chr6:157289385-157323601	3	-	157292900	157323499	789624	4	3614,138,101,190,	0,29396,33319,34026,
#Deleted in new
chr6	157299044	157300126	chr6:157299044-157300126	7	-	157299044	157299044	16724991	1	1082,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	157318180	157323601	chr6:157318180-157323601	1	-	157318721	157323499	789624	3	739,101,190,	0,4524,5231,
#Deleted in new
chr6	157323963	157324477	chr6:157323963-157324477	3	+	157323963	157323963	8553170	1	514,	0,
#Deleted in new
chr6	157365989	157366923	chr6:157365989-157366923	7	-	157365989	157365989	16724991	1	934,	0,
#Deleted in new
chr6	157372555	157373171	chr6:157372555-157373171	7	-	157372555	157372555	16724991	1	616,	0,
#Partially deleted in new
chr6	157381132	157678146	chr6:157381132-157678146	3	+	157382021	157673122	789624	9	1134,161,159,138,49,103,110,103,5423,	0,161452,211855,247216,251701,264604,266126,272392,291591,
#Partially deleted in new
chr6	157381132	157673945	chr6:157381132-157673945	1	+	157382021	157673122	789624	9	1134,161,159,138,49,103,110,103,1177,	0,161452,211855,247216,251701,264604,266126,272392,291636,
#Deleted in new
chr6	157529131	157529200	chr6:157529131-157529200	3	+	157529131	157529131	5263520	1	69,	0,
#Partially deleted in new
chr6	157542584	157672873	chr6:157542584-157672873	0	+	157542584	157632857	789624	8	161,159,26,49,103,110,103,150,	0,50403,85764,90249,103152,104674,110940,130139,
#Partially deleted in new
chr6	157542588	157628603	chr6:157542588-157628603	0	+	157542588	157542588	8553170	3	157,159,255,	0,50399,85760,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	157592772	157673938	chr6:157592772-157673938	0	+	157592772	157592772	8553170	8	57,159,138,49,103,110,103,1215,	0,215,35576,40061,52964,54486,60752,79951,
#Partially deleted in new
chr6	157593008	157645838	chr6:157593008-157645838	0	+	157593008	157645838	789624	4	138,39,49,102,	0,35439,39825,52728,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	157629388	157673937	chr6:157629388-157673937	0	+	157629388	157629388	8553170	6	3494,103,122,110,103,1214,	0,16348,16887,17870,24136,43335,
#Partially deleted in new
chr6	157630313	157673529	chr6:157630313-157673529	0	+	157630313	157630313	8553170	5	2569,103,110,103,761,	0,15423,16945,23211,42455,
#Partially deleted in new
chr6	157631121	157673529	chr6:157631121-157673529	0	+	157631121	157631121	8553170	5	1761,103,110,103,806,	0,14615,16137,22403,41602,
#Partially deleted in new
chr6	157700386	157875149	chr6:157700386-157875149	0	+	157867555	157875149	789624	6	85,152,44,87,75,99,	0,65998,79437,167160,172715,174664,
#Partially deleted in new
chr6	157716045	157875087	chr6:157716045-157875087	2	+	157867555	157875087	789624	6	158,152,44,87,75,37,	0,50339,63778,151501,157056,159005,
#Partially deleted in new
chr6	157823263	157945077	chr6:157823263-157945077	1	+	157823434	157942838	0	18	183,87,75,126,172,148,85,126,118,131,104,104,78,77,90,115,92,2287,	0,44283,49838,51787,73563,78634,82864,86401,86644,98267,103847,105335,108931,112700,114170,115369,117619,119527,
#Partially deleted in new
chr6	157829142	157830573	chr6:157829142-157830573	3	-	157829142	157829142	8553170	2	300,381,	0,1050,
#Deleted in new
chr6	157872570	157875210	chr6:157872570-157875210	3	-	157872570	157872570	8553170	3	407,58,278,	0,2123,2362,
#Deleted in new
chr6	157874109	157875210	chr6:157874109-157875210	1	-	157874109	157874109	8553170	3	276,58,278,	0,584,823,
#Partially deleted in new
chr6	157885113	157892786	chr6:157885113-157892786	3	-	157885113	157885113	8553170	2	278,94,	0,7579,
#Deleted in new
chr6	157924401	157924676	chr6:157924401-157924676	7	+	157924401	157924401	16724991	1	275,	0,
#Deleted in new
chr6	157934167	157934257	chr6:157934167-157934257	3	+	157934167	157934167	8553170	1	90,	0,
#Partially deleted in new
chr6	157981886	158099176	chr6:157981886-158099176	3	+	157981961	158096364	0	27	202,87,271,226,84,62,97,173,82,150,166,192,82,141,193,159,157,118,219,79,169,174,135,113,109,179,3559,	0,35317,46869,51568,61429,73080,77370,80105,81904,82714,82939,84557,86760,87646,89715,92693,94739,96277,99222,99545,101542,102114,104968,106773,107952,111039,113731,
#Partially deleted in new
chr6	157981953	158094094	chr6:157981953-158094094	1	+	157981961	158094010	0	27	135,87,271,226,84,62,97,173,82,150,166,192,82,141,193,159,157,118,219,79,169,174,135,113,109,179,207,	0,35250,46802,51501,61362,73013,77303,80038,81837,82647,82872,84490,86693,87579,89648,92626,94672,96210,99155,99478,101475,102047,104901,106706,107885,110972,111934,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	157982037	158030937	chr6:157982037-158030937	0	+	157982037	158030408	789624	4	51,87,271,530,	0,35166,46718,48370,
#Deleted in new
chr6	158000108	158000749	chr6:158000108-158000749	3	-	158000108	158000108	8553170	2	233,31,	0,610,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	158001106	158002383	chr6:158001106-158002383	3	+	158001106	158001106	5263520	3	269,120,210,	0,475,1067,
#Partially deleted in new
chr6	158017047	158099176	chr6:158017047-158099176	1	+	158043315	158096364	789624	26	243,271,226,84,62,97,173,82,150,166,192,82,141,193,159,157,118,219,79,169,174,135,113,109,179,3559,	0,11708,16407,26268,37919,42209,44944,46743,47553,47778,49396,51599,52485,54554,57532,59578,61116,64061,64384,66381,66953,69807,71612,72791,75878,78570,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	158017464	158033532	chr6:158017464-158033532	0	+	158017734	158033532	789624	3	331,271,78,	0,11291,15990,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	158027366	158029406	chr6:158027366-158029406	0	+	158027366	158027366	8553170	1	2040,	0,
#Partially deleted in new
chr6	158033489	158063872	chr6:158033489-158063872	0	+	158033489	158059416	789624	6	191,84,62,281,110,82,	0,9826,21477,25767,28565,30301,
#Partially deleted in new
chr6	158070127	158096463	chr6:158070127-158096463	1	+	158071632	158096364	789624	14	379,193,159,157,118,219,79,169,174,135,113,109,179,846,	0,1474,4452,6498,8036,10981,11304,13301,13873,16727,18532,19711,22798,25490,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	158077679	158097854	chr6:158077679-158097854	0	+	158077679	158077679	8553170	10	1677,219,79,169,174,135,113,109,179,2237,	0,3429,3752,5749,6321,9175,10980,12159,15246,17938,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr6	158109514	158168262	chr6:158109514-158168262	1	-	158111365	158158363	789624	17	1988,144,183,98,95,142,151,163,114,129,122,132,90,137,37,92,123,	0,3934,5274,6670,8212,9514,10910,18593,20858,33541,34784,37267,39350,40938,45800,48758,58625,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr6	158109514	158168280	chr6:158109514-158168280	3	-	158111365	158158363	789624	17	1988,144,183,98,95,142,151,163,114,129,122,132,90,137,37,92,141,	0,3934,5274,6670,8212,9514,10910,18593,20858,33541,34784,37267,39350,40938,45800,48758,58625,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr6	158109534	158168268	chr6:158109534-158168268	0	-	158146912	158158363	8553170	19	1968,144,183,98,44,95,142,151,163,114,129,122,132,90,111,37,92,5,129,	0,3914,5254,6650,7997,8192,9494,10890,18573,20838,33521,34764,37247,39330,40918,45780,48738,52613,58605,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	158109540	158168245	chr6:158109540-158168245	1	-	158111365	158158363	789624	14	1962,144,183,98,95,142,151,163,114,129,122,132,92,106,	0,3908,5248,6644,8186,9488,10884,18567,20832,33515,34758,37241,48732,58599,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr6	158109690	158168246	chr6:158109690-158168246	0	-	158150551	158158363	789624	15	1812,144,183,1637,142,151,163,114,129,122,132,90,137,92,107,	0,3758,5098,6494,9338,10734,18417,20682,33365,34608,37091,39174,40762,48582,58449,
#Duplicated in new
chr6	158109692	158168275	chr6:158109692-158168275	0	-	158150551	158158363	789624	15	1810,144,183,98,95,142,151,163,114,129,122,90,137,92,136,	0,3756,5096,6492,8034,9336,10732,18415,20680,33363,34606,39172,40760,48580,58447,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	158110224	158168268	chr6:158110224-158168268	0	-	158150551	158158363	789624	14	3368,183,98,95,92,151,114,129,122,132,90,137,92,129,	0,4564,5960,7502,8804,10200,20148,32831,34074,36557,38640,40228,48048,57915,
#Partially deleted in new
chr6	158110598	158168164	chr6:158110598-158168164	0	-	158150551	158158363	789624	15	904,144,183,98,95,142,151,163,129,122,132,90,137,92,25,	0,2850,4190,5586,7128,8430,9826,17509,32457,33700,36183,38266,39854,47674,57541,
#Partially deleted in new
chr6	158110619	158168246	chr6:158110619-158168246	1	-	158111365	158158363	789624	16	883,144,183,98,95,142,151,163,114,129,122,132,137,37,92,107,	0,2829,4169,5565,7107,8409,9805,17488,19753,32436,33679,36162,39833,44695,47653,57520,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr6	158110626	158166159	chr6:158110626-158166159	0	-	158110626	158110626	8553170	18	876,144,183,98,95,142,151,163,114,129,122,100,132,90,137,92,1221,46,	0,2822,4162,5558,7100,8402,9798,17481,19746,32429,33672,34637,36155,38238,39826,47646,50305,55487,
#Partially deleted in new
chr6	158110667	158168242	chr6:158110667-158168242	1	-	158111365	158158363	789624	15	835,144,183,98,95,142,151,163,114,129,122,132,135,92,103,	0,2781,4121,5517,7059,8361,9757,17440,19705,32388,33631,36114,39785,47605,57472,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr6	158110871	158168267	chr6:158110871-158168267	1	-	158113407	158158363	789624	16	2721,183,98,95,142,151,163,114,129,122,132,90,137,37,92,128,	0,3917,5313,6855,8157,9553,17236,19501,32184,33427,35910,37993,39581,44443,47401,57268,
#Partially deleted in new
chr6	158114470	158168171	chr6:158114470-158168171	0	-	158116246	158158363	789624	13	501,98,142,151,163,129,122,132,90,137,37,92,32,	0,1714,4558,5954,13637,28585,29828,32311,34394,35982,40844,43802,53669,
#Partially deleted in new
chr6	158114534	158168230	chr6:158114534-158168230	0	-	158150551	158158363	789624	14	437,98,95,142,151,163,114,129,122,132,90,137,92,91,	0,1650,3192,4494,5890,13573,15838,28521,29764,32247,34330,35918,43738,53605,
#Partially deleted in new
chr6	158114592	158168280	chr6:158114592-158168280	1	-	158114708	158158363	789624	15	379,98,95,142,151,163,114,129,122,132,90,137,37,92,141,	0,1592,3134,4436,5832,13515,15780,28463,29706,32189,34272,35860,40722,43680,53547,
#Partially deleted in new
chr6	158114730	158168259	chr6:158114730-158168259	1	-	158114920	158158363	789624	16	241,98,44,95,142,151,163,114,129,122,132,90,137,37,92,120,	0,1454,2801,2996,4298,5694,13377,15642,28325,29568,32051,34134,35722,40584,43542,53409,
#Partially deleted in new
chr6	158114825	158130486	chr6:158114825-158130486	0	-	158119089	158130486	789624	7	146,98,95,92,151,163,114,	0,1359,2901,4203,5599,13282,15547,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	158145919	158159298	chr6:158145919-158159298	0	-	158145919	158145919	8553170	5	994,90,137,37,1026,	0,2945,4533,9395,12353,
#Duplicated in new
chr6	158146869	158152842	chr6:158146869-158152842	0	-	158146869	158146869	8553170	5	44,90,137,91,87,	0,1995,3583,4169,5886,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	158168351	158199344	chr6:158168351-158199344	3	+	158170503	158192157	0	3	44,69,7368,	0,2118,23625,
#Partially deleted in new
chr6	158232235	158312662	chr6:158232235-158312662	0	+	158232235	158232235	8553170	2	68,612,	0,79815,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	158237335	158242797	chr6:158237335-158242797	7	-	158237335	158237335	16724991	2	1068,911,	0,4551,
#Partially deleted in new
chr6	158282262	158312358	chr6:158282262-158312358	0	+	158282262	158282262	8553170	2	116,308,	0,29788,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	158282840	158428379	chr6:158282840-158428379	3	+	158282840	158282840	8553170	2	20,541,	0,144998,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr6	158312487	158511828	chr6:158312487-158511828	3	+	158314016	158506694	789624	14	1781,129,162,181,135,167,225,235,145,145,94,144,2501,5251,	0,100577,117248,136508,139646,149075,167263,168567,177100,181085,182265,186181,189190,194090,
#Partially deleted in new
chr6	158312659	158508376	chr6:158312659-158508376	1	+	158314016	158506600	789624	13	1609,129,162,181,135,167,225,235,145,145,94,144,1799,	0,100405,117076,136336,139474,148903,167091,168395,176928,180913,182093,186009,193918,
#Partially deleted in new
chr6	158313444	158481538	chr6:158313444-158481538	0	+	158313444	158313444	8553170	8	824,129,162,181,135,167,225,484,	0,99620,116291,135551,138689,148118,166306,167610,
#Deleted in new
chr6	158397884	158398561	chr6:158397884-158398561	3	-	158397884	158397884	8553170	2	91,52,	0,625,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	158437796	158438088	chr6:158437796-158438088	3	+	158437796	158437796	8553170	1	292,	0,
#Partially deleted in new
chr6	158461649	158498693	chr6:158461649-158498693	0	+	158461649	158493682	789624	6	80,225,235,145,94,25,	0,18101,19405,31923,33103,37019,
#Deleted in new
chr6	158515604	158516229	chr6:158515604-158516229	7	-	158515604	158515604	16724991	1	625,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr6	158536435	158635428	chr6:158536435-158635428	3	+	158536446	158631888	789624	17	430,104,56,91,122,111,81,100,131,92,58,103,52,83,90,67,3619,	0,36984,44504,47518,48868,53236,68831,70808,71897,72223,87114,88668,89267,91972,93294,94887,95374,
#Partially deleted in new
chr6	158609705	158621636	chr6:158609705-158621636	7	-	158609705	158609705	16724991	2	1983,243,	0,11688,
#Deleted in new
chr6	158609706	158609790	chr6:158609706-158609790	3	+	158609706	158609706	5263520	1	84,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	158636473	158642788	chr6:158636473-158642788	0	-	158636473	158636473	8553170	2	1421,1470,	0,4845,
#Partially deleted in new
chr6	158636473	158644739	chr6:158636473-158644739	3	-	158636826	158644708	0	5	424,78,124,42,58,	0,654,1297,4845,8208,
#Partially deleted in new
chr6	158637219	158644738	chr6:158637219-158644738	0	-	158637219	158637219	8553170	3	675,42,57,	0,4099,7462,
#Partially deleted in new
chr6	158650013	158764876	chr6:158650013-158764876	1	+	158663268	158764604	789624	19	65,90,117,63,174,219,65,52,70,79,125,135,179,103,171,106,103,206,382,	0,1739,11255,12736,13191,15381,32911,57216,58308,63786,68073,75489,95466,101914,107197,110626,112062,113290,114481,
#Partially deleted in new
chr6	158650013	158764876	chr6:158650013-158764876	1	+	158663268	158764604	789624	16	65,90,117,629,219,65,52,70,135,179,103,171,106,103,206,382,	0,1739,11255,12736,15381,32911,57216,58308,75489,95466,101914,107197,110626,112062,113290,114481,
#Partially deleted in new
chr6	158650013	158764876	chr6:158650013-158764876	3	+	158663268	158764604	789624	18	65,90,117,629,219,65,52,70,79,125,135,179,103,171,106,103,206,382,	0,1739,11255,12736,15381,32911,57216,58308,63786,68073,75489,95466,101914,107197,110626,112062,113290,114481,
#Partially deleted in new
chr6	158650052	158663048	chr6:158650052-158663048	0	+	158650052	158650052	8553170	4	26,90,117,299,	0,1700,11216,12697,
#Partially deleted in new
chr6	158661318	158764869	chr6:158661318-158764869	1	+	158663268	158764604	789624	17	67,63,174,219,65,52,70,79,125,135,179,103,171,106,103,206,375,	0,1431,1886,4076,21606,45911,47003,52481,56768,64184,84161,90609,95892,99321,100757,101985,103176,
#Partially deleted in new
chr6	158725746	158726803	chr6:158725746-158726803	7	-	158725746	158725746	16724991	1	1057,	0,
#Deleted in new
chr6	158764660	158764753	chr6:158764660-158764753	3	-	158764660	158764660	5263520	1	93,	0,
#Partially deleted in new
chr6	158765740	158818227	chr6:158765740-158818227	1	-	158766913	158818093	0	13	1338,252,93,161,131,164,97,147,84,275,96,84,146,	0,1520,3585,4043,5023,5503,10667,17779,18903,19568,21367,23547,52341,
#Partially deleted in new
chr6	158765741	158789474	chr6:158765741-158789474	1	-	158766913	158789474	789624	13	1337,252,93,161,131,164,97,147,84,275,96,84,12,	0,1519,3584,4042,5022,5502,10666,17778,18902,19567,21366,23546,23721,
#Partially deleted in new
chr6	158765747	158819412	chr6:158765747-158819412	3	-	158766913	158818093	0	14	1331,252,93,161,131,164,97,147,84,275,96,84,85,96,	0,1513,3578,4036,5016,5496,10660,17772,18896,19561,21360,23540,52334,53569,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	158783533	158819349	chr6:158783533-158819349	0	-	158783533	158783533	8553170	8	133,84,275,96,166,84,85,33,	0,1110,1775,3574,4780,5754,34548,35783,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	158817978	158822252	chr6:158817978-158822252	3	+	158817978	158817978	789624	3	127,122,113,	0,2493,4161,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	158841116	158857632	chr6:158841116-158857632	7	-	158841116	158841116	16724991	3	1023,118,54,	0,16137,16462,
#Partially deleted in new
chr6	158841720	158842170	chr6:158841720-158842170	5	-	158841720	158841720	16724991	1	450,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	158853587	158864502	chr6:158853587-158864502	3	+	158853587	158853587	8553170	4	157,2048,207,275,	0,3474,6903,10640,
#Partially deleted in new
chr6	158869938	158910257	chr6:158869938-158910257	0	+	158869938	158869938	8553170	3	27,146,291,	0,25282,40028,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	158870139	158919105	chr6:158870139-158919105	3	+	158870139	158870139	8553170	5	171,94,141,140,433,	0,3388,25086,47652,48533,
#Partially deleted in new
chr6	158895216	158910352	chr6:158895216-158910352	0	+	158895216	158895216	8553170	2	150,386,	0,14750,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	158908836	158910236	chr6:158908836-158910236	0	+	158908836	158908836	8553170	2	59,270,	0,1130,
#Partially deleted in new
chr6	158921270	158922150	chr6:158921270-158922150	7	-	158921270	158921270	16724991	2	28,552,	0,328,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	158926465	158926571	chr6:158926465-158926571	3	-	158926465	158926465	8553170	1	106,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	158972870	159000187	chr6:158972870-159000187	1	-	158977537	158999550	789624	8	4978,87,163,204,146,142,88,753,	0,5389,7903,9614,10791,13409,20968,26564,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	158975390	158976842	chr6:158975390-158976842	0	-	158975390	158975390	8553170	2	532,261,	0,1191,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	158976833	158999781	chr6:158976833-158999781	1	-	158977537	158999550	789624	6	1015,87,163,204,88,347,	0,1426,3940,5651,17005,22601,
#Partially deleted in new
chr6	158977235	159000166	chr6:158977235-159000166	3	-	158977537	158999976	789624	8	613,87,163,204,146,142,88,732,	0,1024,3538,5249,6426,9044,16603,22199,
#Partially deleted in new
chr6	158999881	159064925	chr6:158999881-159064925	0	+	158999881	158999881	8553170	3	29,511,47,	0,41916,64997,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	158999881	159042223	chr6:158999881-159042223	1	+	158999881	158999881	8553170	5	29,93,87,137,426,	0,26067,27262,41037,41916,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	158999885	159076955	chr6:158999885-159076955	3	+	158999885	158999885	8553170	5	25,511,642,428,1076,	0,41912,67353,68789,75994,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	159025945	159042493	chr6:159025945-159042493	1	+	159025945	159025945	8553170	4	96,60,137,696,	0,14785,14973,15852,
#Partially deleted in new
chr6	159034467	159045152	chr6:159034467-159045152	1	-	159035826	159040775	789624	9	2657,115,196,110,162,67,54,85,274,	0,3646,4646,6255,6886,9121,9510,9652,10411,
#Partially deleted in new
chr6	159034467	159045152	chr6:159034467-159045152	3	-	159035826	159044146	789624	10	2657,115,196,110,162,167,67,54,85,274,	0,3646,4646,6255,6886,7610,9121,9510,9652,10411,
#Partially deleted in new
chr6	159035136	159045152	chr6:159035136-159045152	0	-	159041489	159044146	789624	9	1988,115,196,110,162,67,54,85,274,	0,2977,3977,5586,6217,8452,8841,8983,9742,
#Deleted in new
chr6	159038911	159045018	chr6:159038911-159045018	1	-	159039095	159044146	789624	8	398,110,162,167,67,54,85,140,	0,1811,2442,3166,4677,5066,5208,5967,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	159041797	159088114	chr6:159041797-159088114	1	+	159041797	159041797	8553170	2	511,1562,	0,44755,
#Partially deleted in new
chr6	159042191	159095823	chr6:159042191-159095823	3	-	159042191	159042191	8553170	7	53,67,54,85,42,171,95,	0,1397,1786,1928,2687,22576,53537,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	159051673	159121495	chr6:159051673-159121495	3	-	159051673	159051673	8553170	5	12034,171,171,83,246,	0,13094,44055,53548,69576,
#Deleted in new
chr6	159064727	159065273	chr6:159064727-159065273	0	-	159064727	159064727	8553170	2	211,120,	0,426,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	159094092	159116254	chr6:159094092-159116254	3	+	159094092	159094092	8553170	5	412,174,125,77,481,	0,13217,15222,21339,21681,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	159107790	159116053	chr6:159107790-159116053	0	+	159107790	159107790	8553170	4	363,125,77,280,	0,1524,7641,7983,
#Deleted in new
chr6	159165898	159167353	chr6:159165898-159167353	1	-	159165898	159165898	8553170	2	290,105,	0,1350,
#Partially deleted in new
chr6	159167247	159170007	chr6:159167247-159170007	3	-	159167247	159167247	789624	3	107,229,196,	0,1285,2564,
#Partially deleted in new
chr6	159169396	159272109	chr6:159169396-159272109	3	+	159169596	159271442	789624	23	309,195,87,69,207,99,118,188,108,189,2598,101,112,441,69,144,231,109,80,30,162,123,783,	0,28034,30599,31116,45548,52201,54131,56138,57076,60418,62485,66818,69157,70120,77504,79642,81905,87126,91793,95578,96687,98407,101930,
#Partially deleted in new
chr6	159197446	159272105	chr6:159197446-159272105	0	+	159197446	159271442	789624	21	179,87,69,207,99,118,188,108,2598,101,112,441,69,144,231,109,80,30,162,123,779,	0,2549,3066,17498,24151,26081,28088,29026,34435,38768,41107,42070,49454,51592,53855,59076,63743,67528,68637,70357,73880,
#Partially deleted in new
chr6	159218296	159226554	chr6:159218296-159226554	0	+	159218296	159218296	8553170	5	302,99,118,188,82,	0,3301,5231,7238,8176,
#Partially deleted in new
chr6	159240785	159243329	chr6:159240785-159243329	3	+	159240785	159240785	8553170	2	372,144,	0,2400,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	159353921	159383339	chr6:159353921-159383339	3	-	159353921	159353921	8553170	4	204,379,133,326,	0,536,21820,29092,
#Partially deleted in new
chr6	159383442	159401146	chr6:159383442-159401146	3	+	159383442	159383442	8553170	5	335,142,93,114,202,	0,9766,10074,12618,17502,
#Partially deleted in new
chr6	159383530	159396443	chr6:159383530-159396443	0	+	159383530	159383530	789624	3	247,142,383,	0,9678,12530,
#Deleted in new
chr6	159526061	159526527	chr6:159526061-159526527	7	-	159526061	159526061	16724991	1	466,	0,
#Deleted in new
chr6	159555963	159556174	chr6:159555963-159556174	7	+	159555963	159555963	16724991	1	211,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	159586954	159589169	chr6:159586954-159589169	3	-	159586954	159586954	8553170	2	1001,1001,	0,1214,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	159669056	159693328	chr6:159669056-159693328	3	-	159682492	159693167	0	5	13582,180,117,203,184,	0,15797,19069,23604,24088,
#Partially deleted in new
chr6	159679063	159693234	chr6:159679063-159693234	1	-	159682492	159693167	0	6	235,165,180,117,203,90,	0,3410,5790,9062,13597,14081,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	159679063	159693241	chr6:159679063-159693241	0	-	159688172	159693167	789624	5	3575,180,117,333,97,	0,5790,9062,13467,14081,
#Partially deleted in new
chr6	159679115	159693228	chr6:159679115-159693228	1	-	159682492	159693167	0	5	183,165,180,203,84,	0,3358,5738,13545,14029,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	159679118	159762529	chr6:159679118-159762529	3	-	159682492	159692748	789624	8	180,165,180,117,203,81,139,1493,	0,3355,5735,9007,13542,51766,69419,81918,
#Partially deleted in new
chr6	159682138	159693241	chr6:159682138-159693241	1	-	159682492	159693167	0	4	500,117,203,97,	0,5987,10522,11006,
#Partially deleted in new
chr6	159682164	159693278	chr6:159682164-159693278	1	-	159682492	159693167	0	4	474,180,203,134,	0,2689,10496,10980,
#Partially deleted in new
chr6	159682460	159688348	chr6:159682460-159688348	0	-	159682460	159682460	8553170	3	178,180,223,	0,2393,5665,
#Partially deleted in new
chr6	159682481	159692078	chr6:159682481-159692078	0	-	159682481	159682481	8553170	4	157,180,117,119,	0,2372,5644,9478,
#Partially deleted in new
chr6	159682609	159692650	chr6:159682609-159692650	0	-	159682609	159682609	8553170	3	29,180,245,	0,2244,9796,
#Partially deleted in new
chr6	159684874	159727357	chr6:159684874-159727357	0	-	159684874	159727357	789624	4	159,117,203,92,	0,3251,7786,42391,
#Partially deleted in new
chr6	159684895	159726944	chr6:159684895-159726944	0	-	159684895	159726943	789624	4	138,117,203,93,	0,3230,7765,41956,
#Partially deleted in new
chr6	159684903	159745186	chr6:159684903-159745186	0	-	159684903	159692748	789624	4	130,117,203,57,	0,3222,7757,60226,
#Partially deleted in new
chr6	159684938	159727353	chr6:159684938-159727353	0	-	159684938	159692748	789624	3	95,203,225,	0,7722,42190,
#Deleted in new
chr6	159690918	159693244	chr6:159690918-159693244	1	-	159692463	159693167	789624	2	1945,100,	0,2226,
#Deleted in new
chr6	159712800	159713985	chr6:159712800-159713985	7	-	159712800	159712800	16724991	1	1185,	0,
#Deleted in new
chr6	159720414	159720540	chr6:159720414-159720540	3	-	159720414	159720414	8553170	1	126,	0,
#Partially deleted in new
chr6	159725584	159756319	chr6:159725584-159756319	3	+	159736265	159755611	789624	8	1749,38,56,59,128,179,155,1292,	0,10673,13405,16503,18080,22606,27875,29443,
#Partially deleted in new
chr6	159726995	159755713	chr6:159726995-159755713	0	+	159736265	159748373	8553170	8	338,38,56,59,128,1820,155,686,	0,9262,11994,15092,16669,21195,26464,28032,
#Partially deleted in new
chr6	159726997	159749416	chr6:159726997-159749416	1	+	159736265	159748650	789624	7	336,38,56,59,128,179,827,	0,9260,11992,15090,16667,21193,21592,
#Partially deleted in new
chr6	159727499	159756317	chr6:159727499-159756317	1	+	159736265	159755611	789624	8	204,38,56,59,128,179,155,1290,	0,8758,11490,14588,16165,20691,25960,27528,
#Partially deleted in new
chr6	159727529	159736718	chr6:159727529-159736718	0	+	159727529	159727529	8553170	2	174,461,	0,8728,
#Partially deleted in new
chr6	159727565	159749421	chr6:159727565-159749421	1	+	159736265	159748650	789624	7	138,38,56,59,128,179,832,	0,8692,11424,14522,16099,20625,21024,
#Partially deleted in new
chr6	159727587	159749415	chr6:159727587-159749415	1	+	159736265	159748373	789624	6	116,38,56,59,128,1225,	0,8670,11402,14500,16077,20603,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	159741592	159743694	chr6:159741592-159743694	0	+	159741592	159741592	8553170	2	554,30,	0,2072,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	159760257	159762332	chr6:159760257-159762332	3	-	159760257	159760257	789624	2	1379,339,	0,1736,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	159760327	159779055	chr6:159760327-159779055	3	+	159762087	159778829	0	9	1815,135,182,118,144,123,155,111,397,	0,2591,6677,8183,14842,15822,16974,17842,18331,
#Partially deleted in new
chr6	159762494	159775307	chr6:159762494-159775307	0	+	159762494	159762494	8553170	5	283,135,182,118,138,	0,424,4510,6016,12675,
#Partially deleted in new
chr6	159775285	159779046	chr6:159775285-159779046	0	+	159775285	159775285	8553170	4	987,155,111,388,	0,2016,2884,3373,
#Partially deleted in new
chr6	159778497	159789749	chr6:159778497-159789749	3	-	159779044	159789468	789624	12	764,164,193,124,176,127,182,111,98,129,86,345,	0,1129,1397,1945,2437,5443,6168,6888,7402,9245,9560,10907,
#Partially deleted in new
chr6	159778963	159789596	chr6:159778963-159789596	1	-	159779044	159784065	789624	8	298,164,193,124,176,127,129,192,	0,663,931,1479,1971,4977,8779,10441,
#Partially deleted in new
chr6	159778984	159789572	chr6:159778984-159789572	1	-	159779249	159789468	789624	11	277,193,124,176,127,182,111,98,129,86,168,	0,910,1458,1950,4956,5681,6401,6915,8758,9073,10420,
#Partially deleted in new
chr6	159778986	159789703	chr6:159778986-159789703	1	-	159779044	159785408	789624	11	275,164,193,124,176,127,182,111,98,129,299,	0,640,908,1456,1948,4954,5679,6399,6913,8756,10418,
#Deleted in new
chr6	159779591	159780261	chr6:159779591-159780261	0	-	159779591	159779591	8553170	2	199,367,	0,303,
#Partially deleted in new
chr6	159779915	159789585	chr6:159779915-159789585	0	-	159779915	159789468	789624	5	172,124,176,127,181,	0,527,1019,4025,9489,
#Deleted in new
chr6	159780249	159780381	chr6:159780249-159780381	3	-	159780249	159780249	789624	1	132,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	159781024	159785325	chr6:159781024-159785325	0	-	159781024	159781024	8553170	3	86,127,660,	0,2916,3641,
#Partially deleted in new
chr6	159783989	159789584	chr6:159783989-159789584	0	-	159787854	159789468	789624	7	78,182,111,121,160,86,180,	0,676,1396,1910,3753,4068,5415,
#Partially deleted in new
chr6	159783989	159789672	chr6:159783989-159789672	0	-	159783989	159783989	8553170	4	78,129,86,268,	0,3753,4068,5415,
#Partially deleted in new
chr6	159784675	159785871	chr6:159784675-159785871	0	-	159784675	159784675	8553170	2	172,486,	0,710,
#Partially deleted in new
chr6	159784798	159789672	chr6:159784798-159789672	0	-	159784798	159787759	789624	4	49,111,129,268,	0,587,2944,4606,
#Partially deleted in new
chr6	159784810	159789602	chr6:159784810-159789602	0	-	159785472	159789468	789624	5	37,111,129,86,198,	0,575,2932,3247,4594,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	159785399	159788439	chr6:159785399-159788439	0	-	159785399	159788141	789624	4	97,98,129,382,	0,500,2343,2658,
#Partially deleted in new
chr6	159785417	159788274	chr6:159785417-159788274	0	-	159785417	159785417	8553170	3	79,98,532,	0,482,2325,
#Partially deleted in new
chr6	159785473	159789672	chr6:159785473-159789672	0	-	159785473	159788141	789624	6	23,98,129,86,87,268,	0,426,2269,2584,3136,3931,
#Deleted in new
chr6	159785593	159785733	chr6:159785593-159785733	3	-	159785593	159785593	789624	1	140,	0,
#Partially deleted in new
chr6	159785936	159788868	chr6:159785936-159788868	0	-	159785936	159788141	789624	4	61,129,86,259,	0,1806,2121,2673,
#Partially deleted in new
chr6	159787743	159789576	chr6:159787743-159789576	0	-	159787743	159787743	8553170	2	400,172,	0,1661,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	159788436	159789673	chr6:159788436-159789673	0	-	159788436	159788436	8553170	2	866,269,	0,968,
#Partially deleted in new
chr6	159789811	159798313	chr6:159789811-159798313	0	+	159789811	159789811	789624	4	77,187,232,262,	0,1128,7475,8240,
#Partially deleted in new
chr6	159789885	159797404	chr6:159789885-159797404	0	+	159789885	159789885	8553170	4	175,120,187,118,	0,782,1054,7401,
#Partially deleted in new
chr6	159790465	159798436	chr6:159790465-159798436	3	+	159790587	159798123	0	4	174,187,232,385,	0,474,6821,7586,
#Partially deleted in new
chr6	159790516	159798436	chr6:159790516-159798436	0	+	159790516	159790516	789624	4	271,187,232,385,	0,423,6770,7535,
#Partially deleted in new
chr6	159800248	159820703	chr6:159800248-159820703	1	+	159800728	159820517	789624	19	135,157,74,40,124,89,101,77,144,70,86,56,65,54,43,100,176,99,250,	0,424,864,3022,3716,4300,5734,8491,8766,9777,11452,13352,15720,16294,16860,18306,18697,19005,20205,
#Partially deleted in new
chr6	159800265	159809121	chr6:159800265-159809121	0	+	159800307	159800716	789624	9	118,157,74,118,124,89,101,77,107,	0,407,847,3005,3699,4283,5717,8474,8749,
#Partially deleted in new
chr6	159800268	159820704	chr6:159800268-159820704	0	+	159800307	159800716	789624	19	115,157,74,40,124,89,101,77,144,70,86,56,65,54,43,100,176,99,251,	0,404,844,3002,3696,4280,5714,8471,8746,9757,11432,13332,15700,16274,16840,18286,18677,18985,20185,
#Partially deleted in new
chr6	159800270	159806037	chr6:159800270-159806037	0	+	159800307	159800716	789624	6	113,157,40,124,89,55,	0,402,3000,3694,4278,5712,
#Partially deleted in new
chr6	159800273	159820703	chr6:159800273-159820703	3	+	159800307	159820517	789624	19	110,58,74,40,124,89,101,77,144,70,86,56,65,54,43,100,176,99,250,	0,498,839,2997,3691,4275,5709,8466,8741,9752,11427,13327,15695,16269,16835,18281,18672,18980,20180,
#Partially deleted in new
chr6	159800293	159805738	chr6:159800293-159805738	0	+	159800293	159800293	8553170	7	86,58,74,40,124,89,100,	0,478,819,2977,3671,4255,5345,
#Partially deleted in new
chr6	159808927	159816595	chr6:159808927-159816595	0	+	159808927	159808927	8553170	5	231,70,56,65,53,	0,1098,4673,7041,7615,
#Partially deleted in new
chr6	159899185	159902510	chr6:159899185-159902510	3	+	159899185	159899185	8553170	2	207,388,	0,2937,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	159906689	159916530	chr6:159906689-159916530	3	+	159906955	159907933	789624	1	9841,	0,
#Boundary problem: need 48, got 0, diff 48, mapped 0.0
chr6	159969098	160111504	chr6:159969098-160111504	3	+	159969246	160105084	0	48	297,140,125,99,133,130,106,163,166,104,165,141,144,138,148,178,116,169,180,102,102,193,171,144,176,88,216,131,98,137,191,127,120,257,219,150,162,208,147,235,137,115,147,188,187,153,70,6831,	0,22085,39911,41588,55473,58086,60451,63452,63843,65320,71461,74049,75415,76646,77399,78060,78693,79276,81374,87325,88924,89807,91448,92404,92654,93433,94316,95302,95705,99150,100769,102811,103666,104114,104658,106748,109102,110481,111030,114851,115896,118934,120008,120817,127340,133420,134647,135575,
#Partially deleted in new
chr6	159969105	160106551	chr6:159969105-160106551	1	+	159969246	160105084	8553170	48	290,140,125,99,133,130,106,163,166,104,165,141,144,138,148,178,116,169,180,102,102,193,171,144,176,88,216,131,98,137,191,127,120,257,219,150,162,208,147,235,137,115,147,188,187,153,70,1878,	0,22078,39904,41581,55466,58079,60444,63445,63836,65313,71454,74042,75408,76639,77392,78053,78686,79269,81367,87318,88917,89800,91441,92397,92647,93426,94309,95295,95698,99143,100762,102804,103659,104107,104651,106741,109095,110474,111023,114844,115889,118927,120001,120810,127333,133413,134640,135568,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	160003290	160007664	chr6:160003290-160007664	1	-	160003290	160003290	789624	1	4374,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	160003290	160007664	chr6:160003290-160007664	3	-	160003290	160003290	789624	3	97,208,1184,	0,1660,3190,
#Partially deleted in new
chr6	160032431	160036725	chr6:160032431-160036725	0	+	160032431	160032431	8553170	3	282,166,2307,	0,510,1987,
#Partially deleted in new
chr6	160061630	160106507	chr6:160061630-160106507	0	+	160061630	160061630	8553170	24	16,176,88,216,131,98,137,191,127,120,257,219,150,162,208,147,235,137,1221,188,187,153,70,1834,	0,122,901,1784,2770,3173,6618,8237,10279,11134,11582,12126,14216,16570,17949,18498,22319,23364,26402,28285,34808,40888,42115,43043,
#Deleted in new
chr6	160073415	160074057	chr6:160073415-160074057	0	+	160073415	160073415	8553170	2	54,301,	0,341,
#Partially deleted in new
chr6	160085060	160090344	chr6:160085060-160090344	0	+	160085060	160090138	789624	4	71,115,147,429,	0,2972,4046,4855,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	160093081	160096212	chr6:160093081-160096212	7	+	160093081	160093081	16724991	1	3131,	0,
#Deleted in new
chr6	160093422	160093993	chr6:160093422-160093993	5	+	160093422	160093422	16724991	1	571,	0,
#Partially deleted in new
chr6	160096446	160113507	chr6:160096446-160113507	0	+	160096446	160096446	8553170	5	179,153,70,109,86,	0,6072,7299,16118,16975,
#Partially deleted in new
chr6	160121788	160158718	chr6:160121788-160158718	3	+	160121935	160158582	789624	11	558,104,155,169,115,107,215,109,113,100,203,	0,8315,10443,12168,14431,14755,17864,21752,33009,34186,36727,
#Partially deleted in new
chr6	160121895	160158718	chr6:160121895-160158718	1	+	160121935	160158582	789624	11	451,104,155,169,115,107,215,109,113,100,203,	0,8208,10336,12061,14324,14648,17757,21645,32902,34079,36620,
#Partially deleted in new
chr6	160121898	160158582	chr6:160121898-160158582	0	+	160121935	160132243	789624	10	448,155,169,115,107,215,109,113,100,67,	0,10333,12058,14321,14645,17754,21642,32899,34076,36617,
#Partially deleted in new
chr6	160121935	160158551	chr6:160121935-160158551	1	+	160121935	160158551	789624	10	411,104,155,169,115,107,215,109,100,36,	0,8168,10296,12021,14284,14608,17717,21605,34039,36580,
#Partially deleted in new
chr6	160121935	160158582	chr6:160121935-160158582	1	+	160121935	160158582	789624	9	411,104,155,169,115,107,215,109,67,	0,8168,10296,12021,14284,14608,17717,21605,36580,
#Partially deleted in new
chr6	160121935	160158716	chr6:160121935-160158716	0	+	160121935	160143541	789624	9	411,104,155,169,115,107,109,113,201,	0,8168,10296,12021,14284,14608,21605,32862,36580,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	160129760	160134007	chr6:160129760-160134007	0	+	160132292	160134007	789624	3	447,155,51,	0,2471,4196,
#Partially deleted in new
chr6	160155953	160158718	chr6:160155953-160158718	0	+	160155953	160155953	8553170	2	121,203,	0,2562,
#Deleted in new
chr6	160163538	160163755	chr6:160163538-160163755	7	-	160163538	160163538	16724991	1	217,	0,
#Partially deleted in new
chr6	160171060	160245541	chr6:160171060-160245541	0	-	160171060	160171060	8553170	6	377,100,113,109,215,103,	0,53644,70413,71233,72511,74378,
#Partially deleted in new
chr6	160216761	160259016	chr6:160216761-160259016	3	-	160217431	160258757	789624	11	737,100,113,109,215,107,115,169,155,104,673,	0,7943,24712,25532,26810,28677,30422,32454,33786,39852,41582,
#Deleted in new
chr6	160217013	160218284	chr6:160217013-160218284	0	-	160217013	160217013	8553170	3	485,165,85,	0,880,1186,
#Partially deleted in new
chr6	160217452	160258758	chr6:160217452-160258758	0	-	160217452	160217452	8553170	10	46,100,113,109,215,107,115,169,155,415,	0,7252,24021,24841,26119,27986,29731,31763,33095,40891,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	160244184	160277638	chr6:160244184-160277638	1	-	160245434	160258694	789624	8	1361,115,169,155,104,372,1275,186,	0,2999,5031,6363,12429,14159,15228,33268,
#Deleted in new
chr6	160257749	160258739	chr6:160257749-160258739	0	-	160257749	160257749	8553170	2	232,396,	0,594,
#Partially deleted in new
chr6	160272616	160276130	chr6:160272616-160276130	3	+	160272616	160272616	8553170	2	97,370,	0,3144,
#Partially deleted in new
chr6	160348267	160452581	chr6:160348267-160452581	3	+	160348419	160451056	789624	11	581,104,155,169,118,98,215,109,113,100,1586,	0,49711,58773,60485,62461,88512,88729,94493,95362,99451,102728,
#Partially deleted in new
chr6	160453427	160511007	chr6:160453427-160511007	7	-	160453427	160453427	16724991	17	159,117,107,121,94,149,179,160,181,158,182,160,182,158,182,160,49,	0,796,5628,7827,10785,13441,14113,23701,25080,29234,30636,32387,33823,37935,39353,47353,57531,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	160466554	160477195	chr6:160466554-160477195	4	-	160466554	160466554	16724991	2	463,67,	0,10574,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	160466808	160511124	chr6:160466808-160511124	4	-	160466808	160466808	16724991	10	209,159,181,132,182,160,182,182,160,166,	0,10321,11699,15879,17255,19006,20442,25972,33972,44150,
#Partially deleted in new
chr6	160467183	160511124	chr6:160467183-160511124	4	-	160467183	160467183	16724991	10	536,160,181,132,182,160,182,182,160,166,	0,9945,11324,15504,16880,18631,20067,25597,33597,43775,
#Partially deleted in new
chr6	160491621	160511016	chr6:160491621-160511016	4	-	160491621	160491621	16724991	4	407,182,160,58,	0,1159,9159,19337,
#Partially deleted in new
chr6	160491890	160520269	chr6:160491890-160520269	5	-	160491890	160491890	16724991	3	1072,160,304,	0,8890,28075,
#Partially deleted in new
chr6	160531482	160664259	chr6:160531482-160664259	3	-	160531728	160664214	789624	39	408,119,107,141,75,121,94,149,182,160,182,160,182,160,182,160,158,160,182,160,182,160,182,160,182,160,182,160,182,160,182,160,182,160,182,160,182,160,94,	0,1048,6372,8560,9624,11205,13957,16306,16995,24542,25907,45653,47040,53563,54966,58070,59461,62475,63871,68017,69434,73563,74994,80079,81449,85634,87001,91180,92547,96724,98091,102270,103640,107817,109184,113364,114731,118855,132683,
#Partially deleted in new
chr6	160586479	160613115	chr6:160586479-160613115	1	-	160586479	160613115	789624	11	151,160,158,160,182,160,182,160,182,160,184,	0,3073,4464,7478,8874,13020,14437,18566,19997,25082,26452,
#Deleted in new
chr6	160617115	160640850	chr6:160617115-160640850	1	-	160617115	160640850	789624	10	161,182,160,182,160,182,160,182,160,184,	0,1368,5547,6914,11091,12458,16637,18007,22184,23551,
#Partially deleted in new
chr6	160666227	160676523	chr6:160666227-160676523	7	-	160666227	160666227	16724991	2	146,114,	0,10182,
#Partially deleted in new
chr6	160698287	160700632	chr6:160698287-160700632	3	+	160698287	160698287	8553170	2	213,79,	0,2266,
#Partially deleted in new
chr6	160698492	160700632	chr6:160698492-160700632	0	+	160698492	160698492	8553170	2	43,79,	0,2061,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	160702237	160711883	chr6:160702237-160711883	1	+	160702304	160711195	789624	4	116,136,107,807,	0,4169,5462,8839,
#Partially deleted in new
chr6	160702241	160753306	chr6:160702241-160753306	3	+	160702304	160753061	0	19	112,136,107,115,140,121,119,163,146,160,182,149,94,121,75,141,107,146,407,	0,4165,5458,8835,10744,12552,14403,16052,16451,20166,28809,29503,31753,34645,36296,36826,39069,49873,50658,
#Partially deleted in new
chr6	160702245	160713026	chr6:160702245-160713026	0	+	160702304	160713026	789624	5	108,187,107,115,41,	0,4161,5454,8831,10740,
#Partially deleted in new
chr6	160702259	160731231	chr6:160702259-160731231	0	+	160702259	160702259	8553170	3	94,160,181,	0,20148,28791,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	160702267	160713376	chr6:160702267-160713376	0	+	160702267	160702267	8553170	5	86,136,107,115,391,	0,4139,5432,8809,10718,
#Partially deleted in new
chr6	160702291	160708609	chr6:160702291-160708609	0	+	160702291	160702291	8553170	4	62,136,107,452,	0,4115,5408,5866,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	160705387	160712279	chr6:160705387-160712279	0	+	160705387	160705387	8553170	3	1155,107,1203,	0,2312,5689,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	160706109	160711572	chr6:160706109-160711572	0	+	160706109	160706109	8553170	4	33,136,107,496,	0,297,1590,4967,
#Deleted in new
chr6	160706374	160708317	chr6:160706374-160708317	0	+	160706374	160706374	8553170	2	168,618,	0,1325,
#Deleted in new
chr6	160730739	160731833	chr6:160730739-160731833	0	+	160730739	160730739	8553170	2	493,89,	0,1005,
#Partially deleted in new
chr6	160738434	160752253	chr6:160738434-160752253	0	+	160738434	160738434	8553170	4	178,141,107,139,	0,633,2876,13680,
#Partially deleted in new
chr6	160739167	160753315	chr6:160739167-160753315	0	+	160739167	160739167	8553170	4	41,58,146,416,	0,2143,12947,13732,
#Deleted in new
chr6	160755397	160757518	chr6:160755397-160757518	7	-	160755397	160755397	16724991	2	60,97,	0,2024,
#Partially deleted in new
chr6	160773987	160783214	chr6:160773987-160783214	7	+	160773987	160773987	16724991	2	45,143,	0,9084,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	160872887	160880394	chr6:160872887-160880394	0	-	160872887	160872887	8553170	2	238,72,	0,7435,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	160872887	160926204	chr6:160872887-160926204	3	-	160872887	160872887	8553170	4	238,176,79,78,	0,27336,42891,53239,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	160872893	160918529	chr6:160872893-160918529	1	-	160872893	160872893	8553170	3	232,79,128,	0,42885,45508,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	160873015	160918449	chr6:160873015-160918449	0	-	160873015	160873015	8553170	4	110,176,79,48,	0,27208,42763,45386,
#Partially deleted in new
chr6	160905769	160913638	chr6:160905769-160913638	7	+	160905769	160905769	16724991	3	152,179,158,	0,6298,7711,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	160926368	160927162	chr6:160926368-160927162	3	+	160926368	160926368	8553170	2	210,169,	0,625,
#Partially deleted in new
chr6	160931079	160969771	chr6:160931079-160969771	3	+	160931079	160931079	8553170	4	293,130,96,54,	0,25491,27889,38638,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	160990317	160992342	chr6:160990317-160992342	3	-	160990317	160990317	8553170	1	2025,	0,
#Partially deleted in new
chr6	160991726	161117385	chr6:160991726-161117385	1	+	160991931	161116870	789624	26	357,191,1364,243,147,158,117,100,84,267,150,162,134,79,79,97,101,81,192,71,117,160,123,107,180,536,	0,42532,56889,78881,81739,89154,92774,94652,94857,95961,97595,99652,100283,101251,102046,105353,110165,110972,114787,116172,117016,118028,120109,120941,123396,125123,
#Partially deleted in new
chr6	160991768	161073536	chr6:160991768-161073536	0	+	160991931	161070713	789624	3	315,243,71,	0,78839,81697,
#Partially deleted in new
chr6	160991783	161117385	chr6:160991783-161117385	3	+	160991931	161116870	789624	27	300,191,1364,243,147,158,117,100,84,267,150,162,134,79,79,97,150,101,81,192,71,117,160,123,107,180,536,	0,42475,56832,78824,81682,89097,92717,94595,94800,95904,97538,99595,100226,101194,101989,105296,106494,110108,110915,114730,116115,116959,117971,120052,120884,123339,125066,
#Partially deleted in new
chr6	160991813	161117382	chr6:160991813-161117382	1	+	160991931	161116870	789624	26	270,191,1364,243,147,158,117,100,84,267,150,162,134,79,67,97,101,81,192,71,117,160,123,107,180,533,	0,42445,56802,78794,81652,89067,92687,94565,94770,95874,97508,99565,100196,101164,101959,105266,110078,110885,114700,116085,116929,117941,120022,120854,123309,125036,
#Partially deleted in new
chr6	160991813	161117382	chr6:160991813-161117382	1	+	160991931	161116870	789624	27	270,191,1364,243,147,158,117,100,84,267,150,162,134,79,67,97,150,101,81,192,71,117,160,123,107,180,533,	0,42445,56802,78794,81652,89067,92687,94565,94770,95874,97508,99565,100196,101164,101959,105266,106464,110078,110885,114700,116085,116929,117941,120022,120854,123309,125036,
#Partially deleted in new
chr6	160991843	161117308	chr6:160991843-161117308	0	+	160991931	161109756	789624	28	240,191,1364,243,147,158,117,100,84,267,150,162,134,79,79,97,150,101,81,192,71,117,91,160,123,107,180,459,	0,42415,56772,78764,81622,89037,92657,94535,94740,95844,97478,99535,100166,101134,101929,105236,106434,110048,110855,114670,116055,116899,117107,117911,119992,120824,123279,125006,
#Partially deleted in new
chr6	161022193	161034449	chr6:161022193-161034449	0	+	161034379	161034449	789624	2	34,191,	0,12065,
#Partially deleted in new
chr6	161034357	161048803	chr6:161034357-161048803	0	+	161034357	161034357	8553170	3	92,46,188,	0,13888,14258,
#Partially deleted in new
chr6	161073328	161086444	chr6:161073328-161086444	0	+	161073328	161073328	8553170	4	284,158,117,66,	0,7552,11172,13050,
#Partially deleted in new
chr6	161080682	161086599	chr6:161080682-161086599	0	+	161080682	161080682	8553170	4	356,117,100,16,	0,3818,5696,5901,
#Partially deleted in new
chr6	161096696	161101992	chr6:161096696-161101992	0	+	161096696	161096696	8553170	2	480,101,	0,5195,
#Partially deleted in new
chr6	161097165	161108933	chr6:161097165-161108933	0	+	161097165	161097165	8553170	7	11,150,101,81,192,71,191,	0,1112,4726,5533,9348,10733,11577,
#Partially deleted in new
chr6	161098239	161108754	chr6:161098239-161108754	0	+	161098239	161098239	8553170	6	188,101,81,192,71,12,	0,3652,4459,8274,9659,10503,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr6	161101032	161117384	chr6:161101032-161117384	0	+	161101032	161101032	8553170	10	960,81,192,71,117,160,123,107,180,535,	0,1666,5481,6866,7710,8722,10803,11635,14090,15817,
#Deleted in new
chr6	161108878	161109886	chr6:161108878-161109886	0	+	161108878	161108878	8553170	2	163,132,	0,876,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	161129978	161274025	chr6:161129978-161274025	1	-	161153482	161232213	789624	8	6656,199,76,103,154,162,267,88,	0,9443,16545,19208,23367,24170,102057,143959,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	161130024	161274061	chr6:161130024-161274061	3	-	161136539	161232213	789624	9	6610,199,76,103,154,162,170,267,124,	0,9397,16499,19162,23321,24124,36223,102011,143913,
#Partially deleted in new
chr6	161143955	161149289	chr6:161143955-161149289	0	-	161144128	161149289	789624	3	311,76,103,	0,2568,5231,
#Partially deleted in new
chr6	161149204	161232236	chr6:161149204-161232236	0	-	161165659	161232213	789624	6	51,154,162,137,170,201,	0,4141,4944,16372,17043,82831,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	161160104	161161982	chr6:161160104-161161982	3	-	161160104	161160104	789624	1	1878,	0,
#Partially deleted in new
chr6	161165837	161274032	chr6:161165837-161274032	1	-	161166115	161232213	789624	3	580,267,95,	0,66198,108100,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	161347419	162727771	chr6:161347419-162727771	3	-	161350098	162727668	0	12	2792,118,84,150,62,137,116,84,122,241,164,110,	0,12668,39374,201434,221935,438352,625882,706671,853711,915105,1095890,1380242,
#Partially deleted in new
chr6	161348638	162727771	chr6:161348638-162727771	1	-	161350098	162727668	0	9	1573,118,84,150,62,137,116,164,110,	0,11449,38155,200215,220716,437133,624663,1094671,1379023,
#Partially deleted in new
chr6	161348638	162727771	chr6:161348638-162727771	1	-	161350098	162727668	0	11	1573,118,84,150,62,137,116,122,241,164,110,	0,11449,38155,200215,220716,437133,624663,852492,913886,1094671,1379023,
#Partially deleted in new
chr6	161350098	162727668	chr6:161350098-162727668	1	-	161350098	162054135	0	11	113,118,84,150,62,137,116,84,241,164,7,	0,9989,36695,198755,219256,435673,623203,703992,912426,1093211,1377563,
#Partially deleted in new
chr6	161350098	162727668	chr6:161350098-162727668	1	-	161350098	162054135	0	11	113,118,84,150,62,137,116,84,122,164,7,	0,9989,36695,198755,219256,435673,623203,703992,851032,1093211,1377563,
#Partially deleted in new
chr6	161350098	162727668	chr6:161350098-162727668	0	-	161386854	162262699	0	8	113,84,137,116,84,122,241,7,	0,36695,435673,623203,703992,851032,912426,1377563,
#Partially deleted in new
chr6	161350098	161569420	chr6:161350098-161569420	1	-	161350098	161569420	789624	5	113,118,84,150,66,	0,9989,36695,198755,219256,
#Partially deleted in new
chr6	161545111	162727764	chr6:161545111-162727764	1	-	161545413	162727668	789624	10	326,150,62,137,116,84,122,241,164,103,	0,3742,24243,240660,428190,508979,656019,717413,898198,1182550,
#Partially deleted in new
chr6	161548753	161569420	chr6:161548753-161569420	1	-	161548753	161569417	789624	3	9,150,66,	0,100,20601,
#Deleted in new
chr6	162262460	162262768	chr6:162262460-162262768	1	-	162262460	162262768	789624	2	10,251,	0,57,
#Partially deleted in new
chr6	162568378	162569728	chr6:162568378-162569728	7	+	162568378	162568378	16724991	1	1350,	0,
#Partially deleted in new
chr6	162624348	162727686	chr6:162624348-162727686	0	-	162624348	162624348	8553170	3	237,29,25,	0,70689,103313,
#Partially deleted in new
chr6	162624348	162727684	chr6:162624348-162727684	0	-	162624348	162624348	8553170	4	237,45,331,23,	0,19534,70387,103313,
#Partially deleted in new
chr6	162727131	163315492	chr6:162727131-163315492	3	+	162728235	163314987	789624	6	148,232,135,172,150,666,	0,1028,87015,335018,362127,587695,
#Partially deleted in new
chr6	162727960	163315311	chr6:162727960-163315311	1	+	162728235	163314987	789624	5	431,135,172,150,485,	0,86186,334189,361298,586866,
#Partially deleted in new
chr6	162727976	162892021	chr6:162727976-162892021	0	+	162727976	162727976	8553170	3	415,135,24,	0,86170,164021,
#Partially deleted in new
chr6	162727999	162814335	chr6:162727999-162814335	0	+	162727999	162727999	8553170	2	392,189,	0,86147,
#Partially deleted in new
chr6	162814151	163315142	chr6:162814151-163315142	0	+	162814151	162997462	789624	5	130,139,172,150,316,	0,183254,247998,275107,500675,
#Partially deleted in new
chr6	162814244	163179401	chr6:162814244-163179401	0	+	162814244	163179232	789624	4	37,172,150,186,	0,247905,275014,364971,
#Deleted in new
chr6	162957257	162957548	chr6:162957257-162957548	7	-	162957257	162957257	16724991	1	291,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	162969049	162975007	chr6:162969049-162975007	3	-	162969049	162969049	8553170	3	1113,120,191,	0,5059,5767,
#Partially deleted in new
chr6	163016208	163095429	chr6:163016208-163095429	0	+	163016208	163016208	8553170	4	26,172,150,96,	0,45941,73050,79125,
#Partially deleted in new
chr6	163042556	163046685	chr6:163042556-163046685	0	-	163042556	163042556	8553170	4	141,116,98,102,	0,497,2092,4027,
#Partially deleted in new
chr6	163042978	163051414	chr6:163042978-163051414	0	-	163042978	163042978	8553170	4	191,98,100,155,	0,1670,3605,8281,
#Partially deleted in new
chr6	163042979	163054161	chr6:163042979-163054161	3	-	163042979	163042979	789624	4	190,100,773,237,	0,3604,8280,10945,
#Partially deleted in new
chr6	163060842	163090305	chr6:163060842-163090305	1	+	163060842	163090305	789624	4	9,172,154,25,	0,1307,28416,29438,
#Partially deleted in new
chr6	163062285	163245168	chr6:163062285-163245168	0	+	163062285	163245136	789624	3	36,150,229,	0,26973,182654,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	163115690	163137775	chr6:163115690-163137775	3	-	163115690	163115690	8553170	3	1378,244,82,	0,2511,22003,
#Partially deleted in new
chr6	163165413	163191808	chr6:163165413-163191808	1	-	163165413	163165413	8553170	3	849,75,207,	0,25494,26188,
#Partially deleted in new
chr6	163166053	163191943	chr6:163166053-163191943	0	-	163166053	163166053	8553170	3	209,75,63,	0,24854,25827,
#Deleted in new
chr6	163189417	163191802	chr6:163189417-163191802	1	-	163189417	163189417	8553170	2	1565,201,	0,2184,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	163309984	163324530	chr6:163309984-163324530	3	-	163309984	163309984	789624	6	986,89,118,159,679,161,	0,3772,8809,10416,13406,14385,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	163338393	163346744	chr6:163338393-163346744	3	-	163338393	163338393	789624	4	1130,2836,258,392,	0,2361,6321,7959,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	163348018	163353220	chr6:163348018-163353220	3	-	163348018	163348018	8553170	2	2031,196,	0,5006,
#Deleted in new
chr6	163363209	163363463	chr6:163363209-163363463	7	+	163363209	163363209	16724991	1	254,	0,
#Deleted in new
chr6	163413064	163413960	chr6:163413064-163413960	3	-	163413064	163413064	789624	1	896,	0,
#Partially deleted in new
chr6	163413999	163573800	chr6:163413999-163573800	0	+	163415193	163565971	0	8	1336,143,117,144,88,300,850,3107,	0,41279,64780,120982,147982,149420,151946,156694,
#Partially deleted in new
chr6	163414642	163570145	chr6:163414642-163570145	1	+	163415193	163564710	0	7	693,143,117,144,88,300,5479,	0,40636,64137,120339,147339,148777,150024,
#Partially deleted in new
chr6	163414642	163578596	chr6:163414642-163578596	3	+	163415193	163570710	0	8	693,143,117,144,88,300,75,7903,	0,40636,64137,120339,147339,148777,152078,156051,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	163414642	163570145	chr6:163414642-163570145	1	+	163415193	163563745	0	6	693,143,117,144,88,6726,	0,40636,64137,120339,147339,148777,
#Partially deleted in new
chr6	163414642	163570145	chr6:163414642-163570145	1	+	163415193	163565971	0	7	693,143,117,144,88,300,4200,	0,40636,64137,120339,147339,148777,151303,
#Partially deleted in new
chr6	163415169	163570747	chr6:163415169-163570747	1	+	163415193	163570710	0	8	166,143,117,144,88,276,75,54,	0,40109,63610,119812,146812,148274,151551,155524,
#Partially deleted in new
chr6	163415193	163564710	chr6:163415193-163564710	1	+	163415193	163564710	0	7	142,143,117,144,88,276,44,	0,40085,63586,119788,146788,148250,149473,
#Partially deleted in new
chr6	163415237	163570741	chr6:163415237-163570741	0	+	163415237	163478784	789624	7	98,117,144,88,276,75,48,	0,63542,119744,146744,148206,151483,155456,
#Partially deleted in new
chr6	163416314	163535044	chr6:163416314-163535044	0	+	163455301	163535044	789624	4	172,143,117,63,	0,38964,62465,118667,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	163423207	163478802	chr6:163423207-163478802	0	+	163455301	163478802	789624	3	385,143,23,	0,32071,55572,
#Partially deleted in new
chr6	163428994	163534984	chr6:163428994-163534984	0	+	163455301	163457386	789624	5	23,143,171,117,3,	0,26284,28386,49785,105987,
#Partially deleted in new
chr6	163455215	163563461	chr6:163455215-163563461	0	+	163455301	163563461	789624	5	206,117,144,88,42,	0,23564,79766,106766,108204,
#Partially deleted in new
chr6	163455330	163571101	chr6:163455330-163571101	0	+	163455330	163570710	789624	6	91,144,88,300,75,408,	0,79651,106651,108089,111390,115363,
#Partially deleted in new
chr6	163534958	163564699	chr6:163534958-163564699	0	+	163534958	163534958	8553170	4	167,88,300,33,	0,27023,28461,29708,
#Partially deleted in new
chr6	163535079	163569541	chr6:163535079-163569541	0	+	163535079	163569484	789624	5	46,88,300,75,104,	0,26902,28340,31641,34358,
#Deleted in new
chr6	163566457	163571452	chr6:163566457-163571452	0	+	163566457	163566457	8553170	2	338,759,	0,4236,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	163586582	163588165	chr6:163586582-163588165	3	-	163586582	163586582	8553170	2	151,451,	0,1132,
#Partially deleted in new
chr6	163703903	163759841	chr6:163703903-163759841	3	+	163703903	163703903	8553170	2	102,617,	0,55321,
#Partially deleted in new
chr6	163705936	163714306	chr6:163705936-163714306	3	-	163705936	163705936	8553170	3	375,636,240,	0,2232,8130,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	163840560	163840852	chr6:163840560-163840852	3	+	163840560	163840560	8553170	1	292,	0,
#Deleted in new
chr6	164084022	164085661	chr6:164084022-164085661	3	-	164084022	164084022	8553170	1	1639,	0,
#Deleted in new
chr6	164108619	164109694	chr6:164108619-164109694	3	-	164108619	164108619	8553170	2	142,306,	0,769,
#Deleted in new
chr6	164346488	164348644	chr6:164346488-164348644	3	-	164346488	164346488	8553170	2	121,345,	0,1811,
#Partially deleted in new
chr6	164827749	164829617	chr6:164827749-164829617	1	+	164827749	164827749	8553170	2	214,97,	0,1771,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	164827749	164831630	chr6:164827749-164831630	3	+	164827749	164827749	8553170	1	3881,	0,
#Deleted in new
chr6	165117194	165117524	chr6:165117194-165117524	7	-	165117194	165117194	16724991	1	330,	0,
#Partially deleted in new
chr6	165279663	165293222	chr6:165279663-165293222	0	-	165279663	165279663	8553170	5	447,56,54,182,31,	0,1817,1976,10222,13528,
#Partially deleted in new
chr6	165279675	165309607	chr6:165279675-165309607	3	-	165280056	165309586	789624	9	435,54,182,59,125,60,123,728,46,	0,1964,10210,13737,18301,19767,20688,21893,29886,
#Deleted in new
chr6	165280032	165282022	chr6:165280032-165282022	0	-	165280032	165280032	8553170	3	78,56,383,	0,1448,1607,
#Partially deleted in new
chr6	165327286	165662100	chr6:165327286-165662100	1	-	165333024	165662013	0	22	5841,89,81,112,173,156,151,84,143,187,93,143,52,59,51,156,141,50,121,29,129,154,	0,8836,11991,16104,51907,61011,65359,67894,69030,86214,88902,91348,101371,103000,104135,105687,107950,121641,122955,155028,216153,334660,
#Partially deleted in new
chr6	165327286	165662100	chr6:165327286-165662100	0	-	165576444	165662100	8553170	23	5841,89,81,112,173,156,151,84,143,187,93,143,52,59,51,156,141,50,121,29,129,38,154,	0,8836,11991,16104,51907,61011,65359,67894,69030,86214,88902,91348,101371,103000,104135,105687,107950,121641,122955,155028,216153,249125,334660,
#Partially deleted in new
chr6	165327286	165611496	chr6:165327286-165611496	2	-	165327286	165327286	8553170	23	5841,89,81,112,173,156,151,84,143,187,93,143,52,59,51,156,141,50,121,29,129,128,143,	0,8836,11991,16104,51907,61011,65359,67894,69030,86214,88902,91348,101371,103000,104135,105687,107950,121641,122955,155028,216153,249125,284067,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr6	165327286	165482343	chr6:165327286-165482343	0	-	165450327	165482343	8553170	21	5841,89,81,112,173,156,151,84,143,187,93,143,52,59,51,156,141,50,121,118,29,	0,8836,11991,16104,51907,61011,65359,67894,69030,86214,88902,91348,101371,103000,104135,105687,107950,121641,122955,127291,155028,
#Partially deleted in new
chr6	165327288	165661073	chr6:165327288-165661073	1	-	165333024	165660970	8553170	22	5839,89,81,112,173,156,151,84,143,187,93,143,52,59,51,156,141,50,121,29,129,119,	0,8834,11989,16102,51905,61009,65357,67892,69028,86212,88900,91346,101369,102998,104133,105685,107948,121639,122953,155026,216151,333666,
#Partially deleted in new
chr6	165327288	165600778	chr6:165327288-165600778	1	-	165333024	165450347	8553170	22	5839,89,81,112,173,156,151,84,143,187,93,143,52,59,51,156,141,50,121,29,129,613,	0,8834,11989,16102,51905,61009,65357,67892,69028,86212,88900,91346,101369,102998,104133,105685,107948,121639,122953,155026,216151,272877,
#Partially deleted in new
chr6	165327288	165655336	chr6:165327288-165655336	1	-	165333024	165654885	8553170	22	5839,89,81,112,173,156,151,84,143,187,93,143,52,59,51,156,141,50,121,29,129,524,	0,8834,11989,16102,51905,61009,65357,67892,69028,86212,88900,91346,101369,102998,104133,105685,107948,121639,122953,155026,216151,327524,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr6	165327288	165654881	chr6:165327288-165654881	0	-	165466478	165654881	8553170	23	5839,89,81,112,173,156,151,84,143,187,93,143,52,59,51,156,141,50,121,113,29,129,69,	0,8834,11989,16102,51905,61009,65357,67892,69028,86212,88900,91346,101369,102998,104133,105685,107948,121639,122953,139131,155026,216151,327524,
#Partially deleted in new
chr6	165327288	165503356	chr6:165327288-165503356	0	-	165327288	165327288	8553170	21	5839,89,81,112,173,156,151,84,143,187,93,143,52,59,51,156,141,50,121,29,352,	0,8834,11989,16102,51905,61009,65357,67892,69028,86212,88900,91346,101369,102998,104133,105685,107948,121639,122953,155026,175716,
#Partially deleted in new
chr6	165331049	165663245	chr6:165331049-165663245	1	-	165333024	165662811	0	22	2078,89,81,112,173,156,151,84,143,187,93,143,52,59,51,156,141,50,121,29,129,1299,	0,5073,8228,12341,48144,57248,61596,64131,65267,82451,85139,87585,97608,99237,100372,101924,104187,117878,119192,151265,212390,330897,
#Partially deleted in new
chr6	165333024	165576448	chr6:165333024-165576448	1	-	165333024	165576448	789624	22	103,89,81,112,173,156,151,84,143,187,93,143,52,59,51,156,141,50,121,29,129,37,	0,3098,6253,10366,46169,55273,59621,62156,63292,80476,83164,85610,95633,97262,98397,99949,102212,115903,117217,149290,210415,243387,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	165409561	165409676	chr6:165409561-165409676	7	+	165409561	165409561	16724991	1	115,	0,
#Partially deleted in new
chr6	165543439	165986603	chr6:165543439-165986603	0	-	165543439	165986213	8553170	3	129,135,496,	0,167579,442668,
#Partially deleted in new
chr6	165543532	165986603	chr6:165543532-165986603	0	-	165543532	165986213	8553170	2	36,496,	0,442575,
#Deleted in new
chr6	165660068	165662554	chr6:165660068-165662554	1	-	165660418	165660970	789624	2	1510,608,	0,1878,
#Partially deleted in new
chr6	165711018	165988078	chr6:165711018-165988078	0	-	165711018	165711018	8553170	2	135,550,	0,276510,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	165718234	165718338	chr6:165718234-165718338	3	-	165718234	165718234	8553170	1	104,	0,
#Partially deleted in new
chr6	165754188	165775780	chr6:165754188-165775780	3	+	165754188	165754188	8553170	2	194,928,	0,20664,
#Deleted in new
chr6	165773200	165775186	chr6:165773200-165775186	3	-	165773200	165773200	8553170	2	71,288,	0,1698,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	165780268	165986496	chr6:165780268-165986496	0	-	165780268	165780268	8553170	2	1655,389,	0,205839,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	165823644	165987923	chr6:165823644-165987923	0	-	165823644	165823644	8553170	3	559,125,395,	0,87163,163884,
#Partially deleted in new
chr6	165893824	165988062	chr6:165893824-165988062	0	-	165893824	165893824	8553170	3	476,125,534,	0,16983,93704,
#Partially deleted in new
chr6	165901819	165924592	chr6:165901819-165924592	0	-	165901819	165901819	8553170	3	1093,125,361,	0,8988,22412,
#Partially deleted in new
chr6	165908801	165987922	chr6:165908801-165987922	0	-	165908801	165908801	8553170	3	279,125,394,	0,2006,78727,
#Partially deleted in new
chr6	165939455	165988039	chr6:165939455-165988039	0	-	165939455	165939455	789624	2	1311,511,	0,48073,
#Partially deleted in new
chr6	165940588	165987914	chr6:165940588-165987914	0	-	165940588	165940588	8553170	3	178,365,386,	0,8666,46940,
#Partially deleted in new
chr6	165946771	165987991	chr6:165946771-165987991	0	-	165946771	165946771	8553170	4	449,145,660,463,	0,1692,2483,40757,
#Partially deleted in new
chr6	165948222	165988048	chr6:165948222-165988048	0	-	165948222	165948222	8553170	2	1692,520,	0,39306,
#Deleted in new
chr6	165987550	165989615	chr6:165987550-165989615	3	+	165987550	165987550	789624	1	2065,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	166058504	166065722	chr6:166058504-166065722	7	+	166058504	166058504	16724991	2	124,1478,	0,5740,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	166058532	166066028	chr6:166058532-166066028	5	+	166058532	166058532	16724991	3	290,67,1784,	0,4953,5712,
#Deleted in new
chr6	166064290	166065300	chr6:166064290-166065300	5	+	166064290	166064290	16724991	1	1010,	0,
#Partially deleted in new
chr6	166099664	166113273	chr6:166099664-166113273	3	+	166099664	166099664	8553170	3	396,52,587,	0,1045,13022,
#Deleted in new
chr6	166099852	166099924	chr6:166099852-166099924	3	+	166099852	166099852	8553170	1	72,	0,
#Partially deleted in new
chr6	166157655	166168619	chr6:166157655-166168619	3	-	166158314	166167591	0	9	933,130,174,62,62,135,265,383,292,	0,3181,4791,6949,7144,8050,8936,9730,10672,
#Partially deleted in new
chr6	166157655	166168700	chr6:166157655-166168700	1	-	166158314	166167591	0	8	933,130,62,62,135,265,290,373,	0,3181,6949,7144,8050,8936,9730,10672,
#Partially deleted in new
chr6	166158414	166167877	chr6:166158414-166167877	0	-	166158414	166167591	789624	8	174,130,177,62,62,135,265,492,	0,2422,4032,6190,6385,7291,8177,8971,
#Deleted in new
chr6	166164605	166168671	chr6:166164605-166168671	0	-	166164605	166167591	789624	6	61,62,135,265,290,89,	0,194,1100,1986,2780,3977,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	166209402	166209506	chr6:166209402-166209506	3	+	166209402	166209402	8553170	1	104,	0,
#Deleted in new
chr6	166229333	166229554	chr6:166229333-166229554	7	+	166229333	166229333	16724991	1	221,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	166236968	166256947	chr6:166236968-166256947	3	+	166236968	166236968	789624	5	72,1127,89,53,207,	0,5833,17448,18003,19772,
#Deleted in new
chr6	166240289	166240493	chr6:166240289-166240493	7	-	166240289	166240289	16724991	1	204,	0,
#Partially deleted in new
chr6	166275461	166277077	chr6:166275461-166277077	3	-	166275461	166275461	8553170	2	484,97,	0,1519,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	166305299	166308383	chr6:166305299-166308383	3	-	166307254	166308142	789624	1	3084,	0,
#Deleted in new
chr6	166307792	166308448	chr6:166307792-166308448	0	-	166307792	166308142	789624	2	380,200,	0,456,
#Partially deleted in new
chr6	166319727	166342591	chr6:166319727-166342591	3	-	166320216	166342481	789624	8	529,30,59,36,82,83,87,173,	0,3129,4809,6404,8548,9779,10433,22691,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	166319859	166342547	chr6:166319859-166342547	0	-	166319859	166319859	8553170	8	397,1739,36,82,83,87,23,129,	0,2997,6272,8416,9647,10301,11525,22559,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	166320027	166324688	chr6:166320027-166324688	0	-	166320027	166320027	8553170	2	229,1832,	0,2829,
#Partially deleted in new
chr6	166320155	166342576	chr6:166320155-166342576	0	-	166320155	166320155	789624	9	101,30,59,36,82,83,87,23,158,	0,2701,4381,5976,8120,9351,10005,11229,22263,
#Partially deleted in new
chr6	166324360	166331407	chr6:166324360-166331407	0	-	166324360	166324360	8553170	6	235,36,82,83,87,23,	0,1771,3915,5146,5800,7024,
#Partially deleted in new
chr6	166325872	166328339	chr6:166325872-166328339	0	-	166325872	166325872	8553170	2	295,64,	0,2403,
#Deleted in new
chr6	166334567	166335471	chr6:166334567-166335471	7	+	166334567	166334567	16724991	1	904,	0,
#Partially deleted in new
chr6	166364918	166383013	chr6:166364918-166383013	1	-	166365428	166366837	789624	4	535,133,100,208,	0,1055,1876,17887,
#Partially deleted in new
chr6	166364918	166382998	chr6:166364918-166382998	3	-	166365428	166382876	789624	5	535,133,97,4,193,	0,1055,1876,5299,17887,
#Partially deleted in new
chr6	166364918	166383013	chr6:166364918-166383013	1	-	166365428	166382876	789624	5	535,133,97,4,208,	0,1055,1876,4547,17887,
#Partially deleted in new
chr6	166364918	166383013	chr6:166364918-166383013	1	-	166365428	166366837	789624	5	535,133,97,219,208,	0,1055,1876,2050,17887,
#Partially deleted in new
chr6	166365073	166382893	chr6:166365073-166382893	0	-	166365073	166365073	8553170	6	380,133,97,216,4,88,	0,900,1721,1895,5144,17732,
#Partially deleted in new
chr6	166365229	166370335	chr6:166365229-166370335	0	-	166365229	166365229	8553170	4	224,133,97,118,	0,744,1565,4988,
#Partially deleted in new
chr6	166365331	166382871	chr6:166365331-166382871	0	-	166365331	166365331	8553170	6	122,133,97,229,4,66,	0,642,1463,3401,4886,17474,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	166383188	166384824	chr6:166383188-166384824	3	+	166383188	166383188	8553170	1	1636,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	166388135	166389920	chr6:166388135-166389920	3	+	166388135	166388135	8553170	1	1785,	0,
#Partially deleted in new
chr6	166409363	166627243	chr6:166409363-166627243	3	-	166412761	166627019	789624	21	3524,138,118,77,162,159,90,126,131,103,65,89,71,143,38,107,80,81,82,117,323,	0,4430,8861,10518,13892,21089,23037,39360,41739,50085,60477,79469,81307,89144,91523,95142,98839,100913,121868,129304,217557,
#Partially deleted in new
chr6	166409387	166862511	chr6:166409387-166862511	1	-	166412761	166862170	789624	23	3500,138,118,77,162,159,90,126,131,103,65,89,71,143,38,107,80,81,82,117,51,60,404,	0,4406,8837,10494,13868,21065,23013,39336,41715,50061,60453,79445,81283,89120,91499,95118,98815,100889,121844,129280,361475,448812,452720,
#Partially deleted in new
chr6	166411231	166862551	chr6:166411231-166862551	1	-	166412761	166862170	789624	22	1656,138,118,77,162,159,90,126,131,103,65,89,71,143,38,107,80,81,82,117,60,444,	0,2562,6993,8650,12024,19221,21169,37492,39871,48217,58609,77601,79439,87276,89655,93274,96971,99045,120000,127436,446968,450876,
#Partially deleted in new
chr6	166412295	166423984	chr6:166412295-166423984	0	-	166412295	166412295	8553170	6	592,138,118,77,162,117,	0,1498,5929,7586,10960,11572,
#Partially deleted in new
chr6	166412658	166544690	chr6:166412658-166544690	1	-	166412761	166531262	789624	21	229,138,118,77,162,159,90,126,131,103,65,89,71,143,38,107,80,81,82,117,91,	0,1135,5566,7223,10597,17794,19742,36065,38444,46790,57182,76174,78012,85849,88228,91847,95544,97618,118573,126009,131941,
#Partially deleted in new
chr6	166412747	166542450	chr6:166412747-166542450	1	-	166412761	166531262	789624	21	140,138,118,77,162,159,90,126,131,103,65,89,71,143,38,107,80,81,82,117,165,	0,1046,5477,7134,10508,17705,19653,35976,38355,46701,57093,76085,77923,85760,88139,91758,95455,97529,118484,125920,129538,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	166439888	166459551	chr6:166439888-166459551	0	-	166439888	166439888	8553170	4	457,126,131,103,	0,8835,11214,19560,
#Deleted in new
chr6	166460662	166465383	chr6:166460662-166465383	3	-	166460662	166460662	5263520	4	176,156,188,59,	0,2323,2657,4662,
#Partially deleted in new
chr6	166475725	166510310	chr6:166475725-166510310	0	-	166475725	166475725	8553170	8	114,89,71,143,38,107,80,34,	0,13107,14945,22782,25161,28780,32477,34551,
#Partially deleted in new
chr6	166498610	166627522	chr6:166498610-166627522	0	-	166498610	166531262	789624	8	40,38,107,80,81,82,117,51,	0,2276,5895,9592,11666,32621,40057,128861,
#Partially deleted in new
chr6	166504514	166906451	chr6:166504514-166906451	0	-	166504514	166531262	789624	6	98,80,81,82,117,94,	0,3688,5762,26717,34153,401843,
#Partially deleted in new
chr6	166504598	166757911	chr6:166504598-166757911	0	-	166504598	166757577	789624	6	14,80,81,82,117,385,	0,3604,5678,26633,34069,252928,
#Partially deleted in new
chr6	166508222	166862670	chr6:166508222-166862670	0	-	166508222	166862170	789624	8	60,81,82,117,51,60,83,53,	0,2054,23009,30445,262640,349977,353885,354395,
#Deleted in new
chr6	166509353	166509433	chr6:166509353-166509433	3	-	166509353	166509353	5263520	1	80,	0,
#Partially deleted in new
chr6	166510279	166627972	chr6:166510279-166627972	0	-	166510279	166531262	789624	4	78,82,117,337,	0,20952,28388,117356,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	166585603	166587594	chr6:166585603-166587594	3	-	166586120	166586477	8553170	1	1991,	0,
#Deleted in new
chr6	166701093	166702839	chr6:166701093-166702839	7	-	166701093	166701093	16724991	1	1746,	0,
#Partially deleted in new
chr6	166858093	166956124	chr6:166858093-166956124	3	-	166858136	166956124	789624	8	166,46,114,71,58,56,61,28,	0,75997,80801,84925,88588,90476,94394,98003,
#Deleted in new
chr6	166903697	166904835	chr6:166903697-166904835	3	+	166903697	166903697	789624	2	91,536,	0,602,
#Partially deleted in new
chr6	166929503	166956611	chr6:166929503-166956611	1	-	166929587	166952520	789624	10	288,75,46,114,71,58,56,61,133,515,	0,1540,4587,9391,13515,17178,19066,22984,25991,26593,
#Partially deleted in new
chr6	166929503	166956702	chr6:166929503-166956702	1	-	166929587	166956182	0	9	288,75,46,114,71,58,56,61,606,	0,1540,4587,9391,13515,17178,19066,22984,26593,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	166929515	166956543	chr6:166929515-166956543	0	-	166943704	166956182	0	9	276,75,46,114,791,58,56,61,447,	0,1528,4575,9379,13503,17166,19054,22972,26581,
#Deleted in new
chr6	166929517	166933049	chr6:166929517-166933049	0	-	166929517	166929517	8553170	2	274,2006,	0,1526,
#Partially deleted in new
chr6	166929539	166957184	chr6:166929539-166957184	3	-	166929587	166956182	0	10	252,75,46,114,71,58,56,61,95,59,	0,1504,4551,9355,13479,17142,19030,22948,26557,27586,
#Partially deleted in new
chr6	166929544	166956584	chr6:166929544-166956584	0	-	166946730	166956182	789624	9	247,75,46,114,71,58,60,61,488,	0,1499,4546,9350,13474,17137,19021,22943,26552,
#Partially deleted in new
chr6	166929597	166957141	chr6:166929597-166957141	0	-	166929597	166956182	789624	10	194,75,46,114,71,58,56,61,95,193,	0,1446,4493,9297,13421,17084,18972,22890,26499,27351,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	166933364	166953580	chr6:166933364-166953580	0	-	166933364	166933364	8553170	6	772,114,71,58,56,1093,	0,5530,9654,13317,15205,19123,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	166933374	166957191	chr6:166933374-166957191	0	-	166933374	166933374	8553170	4	1718,413,71,243,	0,5221,9644,23574,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr6	166933424	166952534	chr6:166933424-166952534	0	-	166933424	166933424	8553170	7	489,46,114,71,58,56,47,	0,666,5470,9594,13257,15145,19063,
#Partially deleted in new
chr6	166934038	166943239	chr6:166934038-166943239	0	-	166934038	166934038	8553170	3	98,114,221,	0,4856,8980,
#Partially deleted in new
chr6	166938574	166956589	chr6:166938574-166956589	1	-	166938574	166956182	789624	8	36,42,336,42,58,56,61,493,	0,37,81,5193,8107,9995,13913,17522,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	166995734	166999511	chr6:166995734-166999511	3	-	166995734	166995734	8553170	2	847,155,	0,3622,
#Deleted in new
chr6	166997806	166997912	chr6:166997806-166997912	3	-	166997806	166997806	5263520	1	106,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	166999181	167052713	chr6:166999181-167052713	3	+	166999412	167039978	0	13	333,54,55,89,138,81,60,227,113,69,40,97,12810,	0,878,4011,4541,5082,11631,14326,23227,25600,27365,33421,34693,40722,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	166999316	167042418	chr6:166999316-167042418	1	+	166999412	167040119	789624	11	198,54,55,89,138,227,113,69,40,97,2371,	0,743,3876,4406,4947,23092,25465,27230,33286,34558,40731,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	166999404	167139141	chr6:166999404-167139141	3	+	166999404	166999404	8553170	13	110,54,1209,81,227,110,69,40,97,172,133,106,2902,	0,655,3788,11408,23004,25380,27142,33198,34470,45000,135529,136633,136835,
#Partially deleted in new
chr6	166999407	167040317	chr6:166999407-167040317	1	+	166999412	167039978	0	12	107,54,55,89,138,81,227,113,69,40,97,414,	0,652,3785,4315,4856,11405,23001,25374,27139,33195,34467,40496,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	166999456	167011691	chr6:166999456-167011691	0	+	166999456	166999456	8553170	6	58,54,55,89,98,106,	0,603,3736,4266,4807,12129,
#Partially deleted in new
chr6	166999616	167004304	chr6:166999616-167004304	0	+	166999616	166999616	8553170	4	497,55,89,41,	0,3576,4106,4647,
#Deleted in new
chr6	167022425	167025211	chr6:167022425-167025211	0	+	167022425	167022425	8553170	2	210,430,	0,2356,
#Partially deleted in new
chr6	167024789	167033882	chr6:167024789-167033882	0	+	167024789	167024789	8553170	5	105,69,127,40,8,	0,1757,3077,7813,9085,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	167040298	167094789	chr6:167040298-167094789	0	+	167040298	167040298	8553170	4	41,172,96,857,	0,4106,8293,53634,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	167111806	167139141	chr6:167111806-167139141	3	+	167136134	167137355	789624	3	208,106,2902,	0,24231,24433,
#Partially deleted in new
chr6	167111806	167136695	chr6:167111806-167136695	0	+	167136134	167136695	789624	3	208,106,456,	0,24231,24433,
#Partially deleted in new
chr6	167114956	167121527	chr6:167114956-167121527	3	-	167114956	167114956	8553170	4	1205,345,157,42,	0,1786,4229,6529,
#Partially deleted in new
chr6	167120865	167137657	chr6:167120865-167137657	1	+	167136134	167137355	789624	4	120,85,106,1418,	0,2273,15172,15374,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	167122768	167139696	chr6:167122768-167139696	1	+	167136134	167137355	789624	3	455,106,3457,	0,13269,13471,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	167122770	167138946	chr6:167122770-167138946	1	+	167136134	167137355	789624	4	62,105,106,2707,	0,348,13267,13469,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	167126222	167131572	chr6:167126222-167131572	3	-	167126222	167126222	8553170	4	423,147,125,377,	0,926,3236,4973,
#Partially deleted in new
chr6	167146413	167165308	chr6:167146413-167165308	0	+	167146413	167146413	8553170	4	242,95,160,100,	0,2976,17987,18795,
#Partially deleted in new
chr6	167149479	167172277	chr6:167149479-167172277	0	+	167172144	167172277	789624	4	5,117,160,134,	0,477,14921,22664,
#Partially deleted in new
chr6	167156270	167158329	chr6:167156270-167158329	3	-	167156871	167157831	789624	1	2059,	0,
#Partially deleted in new
chr6	167170592	167182908	chr6:167170592-167182908	3	+	167172144	167181916	789624	8	130,145,216,138,159,112,101,1184,	0,1551,3160,6404,7791,8418,10040,11132,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	167170647	167196913	chr6:167170647-167196913	0	+	167172144	167195430	789624	9	75,145,216,138,159,112,101,118,424,	0,1496,3105,6349,7736,8363,9985,24729,25842,
#Partially deleted in new
chr6	167170657	167172809	chr6:167170657-167172809	0	+	167170657	167170657	8553170	2	65,666,	0,1486,
#Partially deleted in new
chr6	167170670	167178760	chr6:167170670-167178760	0	+	167170670	167170670	8553170	3	52,138,377,	0,6326,7713,
#Partially deleted in new
chr6	167193627	167196905	chr6:167193627-167196905	0	+	167193627	167193627	8553170	3	152,118,416,	0,1749,2862,
#Partially deleted in new
chr6	167208630	167208897	chr6:167208630-167208897	7	-	167208630	167208630	16724991	1	267,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	167228306	167233645	chr6:167228306-167233645	1	+	167228306	167228306	8553170	4	91,98,82,403,	0,3553,4172,4936,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	167237507	167240480	chr6:167237507-167240480	3	-	167237507	167237507	8553170	2	298,281,	0,2692,
#Partially deleted in new
chr6	167241890	167245916	chr6:167241890-167245916	3	+	167241890	167241890	8553170	2	75,130,	0,3896,
#Partially deleted in new
chr6	167271168	167296196	chr6:167271168-167296196	0	+	167291489	167296196	789624	4	290,138,182,165,	0,20270,23348,24863,
#Partially deleted in new
chr6	167291314	167316019	chr6:167291314-167316019	3	+	167291489	167315452	789624	8	262,182,230,126,215,136,132,833,	0,3202,4717,6630,12604,14600,16464,23872,
#Deleted in new
chr6	167291340	167296192	chr6:167291340-167296192	0	+	167291340	167291340	8553170	3	236,177,161,	0,3181,4691,
#Partially deleted in new
chr6	167291463	167315988	chr6:167291463-167315988	1	+	167291489	167315452	789624	7	113,182,230,215,136,132,802,	0,3053,4568,12455,14451,16315,23723,
#Deleted in new
chr6	167294516	167298363	chr6:167294516-167298363	0	+	167294516	167294516	8553170	3	182,230,419,	0,1515,3428,
#Partially deleted in new
chr6	167325070	167341887	chr6:167325070-167341887	1	+	167340119	167341679	8553170	2	150,1783,	0,15034,
#Partially deleted in new
chr6	167325085	167341887	chr6:167325085-167341887	3	+	167325173	167341679	789624	3	135,157,1783,	0,13561,15019,
#Partially deleted in new
chr6	167325104	167338686	chr6:167325104-167338686	0	+	167325173	167328109	789624	3	116,381,40,	0,2899,13542,
#Deleted in new
chr6	167347471	167348053	chr6:167347471-167348053	7	+	167347471	167347471	16724991	1	582,	0,
#Partially deleted in new
chr6	167357030	167384510	chr6:167357030-167384510	0	-	167357030	167357030	8553170	7	1266,118,101,2127,216,145,130,	0,2264,17320,18935,24090,25780,27350,
#Partially deleted in new
chr6	167357165	167384510	chr6:167357165-167384510	1	-	167359304	167382873	789624	9	1131,118,101,112,159,138,216,145,130,	0,2129,17185,18800,19380,20789,23955,25645,27215,
#Partially deleted in new
chr6	167372176	167384466	chr6:167372176-167384466	3	-	167373168	167382873	789624	8	1184,101,112,159,138,216,145,86,	0,2174,3789,4369,5778,8944,10634,12204,
#Partially deleted in new
chr6	167372176	167384510	chr6:167372176-167384510	1	-	167373168	167382954	789624	9	1184,101,112,159,138,216,114,28,130,	0,2174,3789,4369,5778,8944,10634,10751,12204,
#Partially deleted in new
chr6	167372967	167384420	chr6:167372967-167384420	1	-	167373168	167382873	8553170	7	393,101,112,138,216,145,40,	0,1383,2998,4987,8153,9843,11413,
#Deleted in new
chr6	167373089	167375801	chr6:167373089-167375801	0	-	167373089	167373089	8553170	2	271,1451,	0,1261,
#Partially deleted in new
chr6	167373890	167384432	chr6:167373890-167384432	0	-	167373890	167373890	8553170	3	2814,138,267,	0,4064,10275,
#Partially deleted in new
chr6	167373895	167384505	chr6:167373895-167384505	0	-	167373895	167373895	8553170	6	556,112,1547,216,145,125,	0,2070,2650,7225,8915,10485,
#Partially deleted in new
chr6	167377858	167384510	chr6:167377858-167384510	0	-	167377858	167377858	8553170	4	234,216,145,130,	0,3262,4952,6522,
#Partially deleted in new
chr6	167380904	167384399	chr6:167380904-167384399	1	-	167381075	167382873	789624	4	432,145,50,19,	0,1906,3261,3476,
#Partially deleted in new
chr6	167381112	167382960	chr6:167381112-167382960	0	-	167381112	167382873	789624	2	224,150,	0,1698,
#Partially deleted in new
chr6	167666839	167679270	chr6:167666839-167679270	3	-	167666839	167666839	789624	3	4070,140,359,	0,11220,12072,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	167679625	167683787	chr6:167679625-167683787	1	-	167679625	167679625	789624	4	2312,115,62,68,	0,2707,3482,4094,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	167680691	167696290	chr6:167680691-167696290	3	-	167680691	167680691	8553170	6	1246,115,1138,43,172,87,	0,1641,2416,14643,15224,15512,
#Deleted in new
chr6	167767082	167768568	chr6:167767082-167768568	7	-	167767082	167767082	16724991	1	1486,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	167784536	167796859	chr6:167784536-167796859	3	-	167784536	167784536	5263520	4	960,294,147,251,	0,2777,6410,12072,
#Partially deleted in new
chr6	167786819	167796846	chr6:167786819-167796846	0	-	167786819	167786819	8553170	3	788,147,238,	0,4127,9789,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	167795529	167798248	chr6:167795529-167798248	3	+	167795529	167795529	789624	1	2719,	0,
#Partially deleted in new
chr6	167796646	167825145	chr6:167796646-167825145	3	+	167796646	167796646	8553170	4	40,88,89,604,	0,25179,26543,27895,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	167823875	167826709	chr6:167823875-167826709	3	-	167823875	167823875	789624	2	931,1307,	0,1527,
#Deleted in new
chr6	167824109	167824774	chr6:167824109-167824774	0	-	167824109	167824109	8553170	2	119,192,	0,473,
#Deleted in new
chr6	167825028	167825460	chr6:167825028-167825460	1	-	167825028	167825028	8553170	3	24,100,58,	0,140,374,
#Partially deleted in new
chr6	167826921	167880372	chr6:167826921-167880372	0	+	167827132	167880372	789624	6	316,196,116,161,161,13,	0,37629,43461,45295,48413,53438,
#Partially deleted in new
chr6	167826960	167962661	chr6:167826960-167962661	1	+	167827132	167962582	789624	31	277,196,113,164,161,158,112,168,45,95,263,70,119,62,206,146,95,266,144,199,104,87,66,74,119,195,92,186,1002,36,229,	0,37590,43425,45253,48374,53399,62254,63901,66901,69917,71244,75356,80210,84140,84323,87207,87683,88207,90128,91774,95895,98044,116168,116441,116980,119746,120892,121332,124225,127497,135472,
#Partially deleted in new
chr6	167826960	167970090	chr6:167826960-167970090	1	+	167827132	167969935	789624	34	277,196,113,164,161,158,112,168,45,95,263,70,119,62,206,21,146,95,266,144,199,104,87,66,74,119,195,92,186,1002,135,289,85,309,	0,37590,43425,45253,48374,53399,62254,63901,66901,69917,71244,75356,80210,84140,84323,86442,87207,87683,88207,90128,91774,95895,98044,116168,116441,116980,119746,120892,121332,124225,135472,138796,142153,142821,
#Partially deleted in new
chr6	167826990	167964296	chr6:167826990-167964296	1	+	167827132	167962582	0	30	247,196,113,164,161,158,112,168,45,95,263,70,119,62,206,146,95,266,144,199,104,87,66,74,119,195,92,186,1002,1858,	0,37560,43395,45223,48344,53369,62224,63871,66871,69887,71214,75326,80180,84110,84293,87177,87653,88177,90098,91744,95865,98014,116138,116411,116950,119716,120862,121302,124195,135448,
#Partially deleted in new
chr6	167826990	167972020	chr6:167826990-167972020	1	+	167827132	167969935	0	32	247,196,113,161,161,158,112,168,95,263,70,119,62,206,146,95,266,144,199,104,87,63,74,119,195,92,186,1002,135,97,85,2239,	0,37560,43395,45226,48344,53369,62224,63871,69887,71214,75326,80180,84110,84293,87177,87653,88177,90098,91744,95865,98014,116138,116411,116950,119716,120862,121302,124195,135442,138766,142123,142791,
#Partially deleted in new
chr6	167826999	167875495	chr6:167826999-167875495	0	+	167827132	167875495	789624	5	238,196,116,164,161,	0,37551,43383,45214,48335,
#Partially deleted in new
chr6	167827132	167952262	chr6:167827132-167952262	0	+	167827132	167827132	8553170	28	105,196,113,161,161,158,112,168,95,263,70,119,62,206,146,95,266,144,199,104,87,66,74,119,195,92,186,1077,	0,37418,43253,45084,48202,53227,62082,63729,69745,71072,75184,80038,83968,84151,87035,87511,88035,89956,91602,95723,97872,115996,116269,116808,119574,120720,121160,124053,
#Partially deleted in new
chr6	167827132	167972023	chr6:167827132-167972023	1	+	167827132	167969935	0	34	105,196,113,161,161,158,112,168,45,95,263,70,119,62,206,146,95,266,144,199,104,87,66,74,119,195,92,186,1002,33,135,289,85,2242,	0,37418,43253,45084,48202,53227,62082,63729,66729,69745,71072,75184,80038,83968,84151,87035,87511,88035,89956,91602,95723,97872,115996,116269,116808,119574,120720,121160,124053,127328,135300,138624,141981,142649,
#Partially deleted in new
chr6	167827132	167969935	chr6:167827132-167969935	1	+	167827132	167969935	0	33	105,196,113,164,161,158,112,168,45,95,263,70,119,62,206,146,95,266,144,199,104,87,66,74,119,195,92,186,1002,135,289,85,154,	0,37418,43253,45081,48202,53227,62082,63729,66729,69745,71072,75184,80038,83968,84151,87035,87511,88035,89956,91602,95723,97872,115996,116269,116808,119574,120720,121160,124053,135300,138624,141981,142649,
#Partially deleted in new
chr6	167827634	167970232	chr6:167827634-167970232	3	+	167864571	167969935	789624	33	298,196,116,164,161,158,112,168,45,95,263,70,119,62,206,146,95,266,144,199,104,87,66,74,119,195,92,186,1002,129,289,85,451,	0,36916,42748,44579,47700,52725,61580,63227,66227,69243,70570,74682,79536,83466,83649,86533,87009,87533,89454,91100,95221,97370,115494,115767,116306,119072,120218,120658,123551,134804,138122,141479,142147,
#Partially deleted in new
chr6	167880480	167912164	chr6:167880480-167912164	0	+	167880480	167911525	789624	9	37,112,168,95,263,70,119,62,881,	0,8734,10381,16397,17724,21836,26690,30620,30803,
#Partially deleted in new
chr6	167893679	167898463	chr6:167893679-167898463	0	+	167893679	167893679	8553170	3	227,95,259,	0,3198,4525,
#Partially deleted in new
chr6	167913540	167965029	chr6:167913540-167965029	0	+	167913540	167913540	8553170	15	773,95,266,144,199,104,87,66,74,119,195,92,186,1002,2597,	0,1103,1627,3548,5194,9315,11464,29588,29861,30400,33166,34312,34752,37645,48892,
#Partially deleted in new
chr6	167915400	167923207	chr6:167915400-167923207	0	+	167915400	167922983	789624	4	33,144,199,352,	0,1688,3334,7455,
#Partially deleted in new
chr6	167932601	167947909	chr6:167932601-167947909	0	+	167932601	167932601	8553170	6	159,66,74,119,195,57,	0,10527,10800,11339,14105,15251,
#Partially deleted in new
chr6	167948028	167951421	chr6:167948028-167951421	0	+	167948028	167948028	8553170	2	450,236,	0,3157,
#Partially deleted in new
chr6	167951903	167970025	chr6:167951903-167970025	0	+	167951903	167969935	789624	5	284,129,289,85,244,	0,10535,13853,17210,17878,
#Partially deleted in new
chr6	167951948	167963060	chr6:167951948-167963060	0	+	167951948	167962582	789624	2	239,628,	0,10484,
#Deleted in new
chr6	167965935	167969967	chr6:167965935-167969967	0	+	167965935	167969935	789624	3	335,85,186,	0,3178,3846,
#Deleted in new
chr6	167966142	167970308	chr6:167966142-167970308	0	+	167966142	167969935	789624	3	134,85,527,	0,2971,3639,
#Deleted in new
chr6	167968448	167970288	chr6:167968448-167970288	0	+	167968448	167968448	8553170	2	750,507,	0,1333,
#Deleted in new
chr6	167968802	167969903	chr6:167968802-167969903	0	+	167968802	167968802	8553170	3	216,85,122,	0,311,979,
#Deleted in new
chr6	167975923	167976939	chr6:167975923-167976939	0	-	167975923	167975923	8553170	1	1016,	0,
#Partially deleted in new
chr6	167976581	167979776	chr6:167976581-167979776	3	-	167976581	167976581	8553170	3	234,291,232,	0,1498,2963,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	167992821	167997077	chr6:167992821-167997077	3	-	167992821	167992821	8553170	3	1332,591,872,	0,2691,3384,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr6	167994171	167997077	chr6:167994171-167997077	1	-	167994171	167994171	789624	4	293,591,364,172,	0,1341,2066,2734,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	167996240	168029524	chr6:167996240-168029524	0	+	167996240	167996240	8553170	6	103,104,117,90,68,33,	0,299,6302,7373,21732,33251,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr6	167998201	168045072	chr6:167998201-168045072	3	+	168029585	168044996	789624	13	669,229,117,90,68,186,75,150,177,152,183,156,246,	0,890,4341,5412,19771,31290,32571,35680,40351,41863,43767,44359,46625,
#Partially deleted in new
chr6	167999091	168045063	chr6:167999091-168045063	1	+	168029585	168044996	789624	10	229,68,186,75,150,177,152,183,156,237,	0,18881,30400,31681,34790,39461,40973,42877,43469,45735,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	168017872	168045089	chr6:168017872-168045089	1	+	168029585	168044996	789624	8	168,186,75,150,177,152,183,263,	0,11619,12900,16009,20680,22192,24096,26954,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	168017872	168045089	chr6:168017872-168045089	1	+	168029585	168044996	789624	9	168,186,75,150,177,152,183,156,263,	0,11619,12900,16009,20680,22192,24096,24688,26954,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	168017872	168045089	chr6:168017872-168045089	0	+	168017872	168017872	8553170	9	168,186,75,150,177,152,183,156,263,	0,11619,12900,16009,20680,22192,24096,24688,26954,
#Partially deleted in new
chr6	168017900	168045089	chr6:168017900-168045089	0	+	168017900	168017900	8553170	8	140,186,75,150,177,152,183,263,	0,11591,12872,15981,20652,22164,24068,26926,
#Partially deleted in new
chr6	168030534	168035773	chr6:168030534-168035773	0	+	168030534	168030534	8553170	3	313,150,32,	0,3347,5207,
#Partially deleted in new
chr6	168033997	168036147	chr6:168033997-168036147	0	+	168033997	168035751	789624	2	34,406,	0,1744,
#Partially deleted in new
chr6	168053165	168101511	chr6:168053165-168101511	1	-	168057096	168079013	789624	13	4174,65,297,175,69,66,156,187,77,80,91,143,87,	0,5958,7595,8641,9505,9728,10435,11705,13589,14201,22079,25716,48259,
#Partially deleted in new
chr6	168055744	168079159	chr6:168055744-168079159	1	-	168057096	168079094	789624	11	1595,65,297,175,66,156,187,77,80,91,278,	0,3379,5016,6062,7149,7856,9126,11010,11622,19500,23137,
#Deleted in new
chr6	168055783	168065977	chr6:168055783-168065977	0	-	168055783	168055783	8553170	9	1556,65,297,175,69,66,156,187,79,	0,3340,4977,6023,6887,7110,7817,9087,10115,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr6	168055803	168079177	chr6:168055803-168079177	0	-	168055803	168055803	8553170	12	1536,65,297,175,69,66,156,1927,80,91,143,72,	0,3320,4957,6003,6867,7090,7797,9101,11563,19441,23078,23302,
#Partially deleted in new
chr6	168055804	168075866	chr6:168055804-168075866	1	-	168057096	168075747	789624	11	1535,65,297,175,66,156,187,77,80,91,128,	0,3319,4956,6002,7089,7796,9066,10950,11562,19440,19934,
#Partially deleted in new
chr6	168056816	168081529	chr6:168056816-168081529	0	-	168067087	168081529	789624	13	523,65,297,175,66,156,187,77,61,80,91,143,187,	0,2307,3944,4990,6077,6784,8054,9938,10252,10550,18428,22065,24526,
#Partially deleted in new
chr6	168056988	168067523	chr6:168056988-168067523	1	-	168057096	168067486	789624	10	351,65,297,175,69,66,156,187,77,157,	0,2135,3772,4818,5682,5905,6612,7882,9766,10378,
#Partially deleted in new
chr6	168063674	168067515	chr6:168063674-168067515	0	-	168067087	168067486	789624	5	82,187,77,61,149,	0,1196,3080,3394,3692,
#Partially deleted in new
chr6	168066754	168081557	chr6:168066754-168081557	0	-	168066754	168081538	789624	5	77,80,91,143,215,	0,612,8490,12127,14588,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	168194357	168204501	chr6:168194357-168204501	3	+	168194357	168194357	8553170	2	331,118,	0,10026,
#Deleted in new
chr6	168225278	168226517	chr6:168225278-168226517	3	-	168225278	168225278	789624	2	246,209,	0,1030,
#Partially deleted in new
chr6	168229731	168240715	chr6:168229731-168240715	3	+	168229731	168229731	8553170	3	123,85,262,	0,9293,10722,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr6	168242937	168262581	chr6:168242937-168262581	3	+	168242937	168242937	789624	5	138,509,226,703,670,	0,15930,16727,17730,18974,
#Partially deleted in new
chr6	168243013	168259700	chr6:168243013-168259700	0	+	168243013	168243013	8553170	2	440,36,	0,16651,
#Deleted in new
chr6	168286904	168289350	chr6:168286904-168289350	7	-	168286904	168286904	16724991	1	2446,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr6	168292829	168319754	chr6:168292829-168319754	1	-	168293893	168319633	789624	6	1112,65,72,279,133,367,	0,1303,1803,17338,18322,26558,
#Partially deleted in new
chr6	168298068	168302114	chr6:168298068-168302114	3	-	168298068	168298068	8553170	2	2521,38,	0,4008,
#Partially deleted in new
chr6	168306903	168319722	chr6:168306903-168319722	3	-	168307431	168319633	789624	4	2195,279,133,335,	0,3264,4248,12484,
#Partially deleted in new
chr6	168307222	168319710	chr6:168307222-168319710	1	-	168307431	168308532	789624	2	1481,139,	0,12349,
#Partially deleted in new
chr6	168307222	168319710	chr6:168307222-168319710	1	-	168307431	168310315	789624	3	1876,155,57,	0,2945,12431,
#Deleted in new
chr6	168374696	168375355	chr6:168374696-168375355	3	+	168374696	168374696	8553170	1	659,	0,
#Partially deleted in new
chr6	168441150	168667994	chr6:168441150-168667994	3	+	168441370	168666438	789624	13	304,172,107,100,48,84,75,187,83,103,275,38,1574,	0,68764,85195,86477,102474,105935,107978,157667,167006,209530,211803,222923,225270,
#Partially deleted in new
chr6	168441150	168667994	chr6:168441150-168667994	1	+	168441370	168666438	789624	13	304,172,107,100,48,51,75,187,83,103,275,38,1574,	0,68764,85195,86477,102474,105968,107978,157667,167006,209530,211803,222923,225270,
#Partially deleted in new
chr6	168652958	168667991	chr6:168652958-168667991	1	+	168667147	168667562	789624	5	270,38,1012,6,549,	0,11115,13462,14475,14484,
#Partially deleted in new
chr6	168653044	168666503	chr6:168653044-168666503	0	+	168653044	168655415	789624	4	184,95,38,83,	0,2351,11029,13376,
#Partially deleted in new
chr6	168653083	168665224	chr6:168653083-168665224	0	+	168653083	168664807	789624	3	145,38,489,	0,10990,11652,
#Partially deleted in new
chr6	168653202	168673445	chr6:168653202-168673445	0	+	168653202	168653202	8553170	4	26,38,65,233,	0,10871,19180,20010,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	168716605	168723495	chr6:168716605-168723495	3	+	168716605	168716605	8553170	3	80,60,417,	0,4356,6473,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	168962609	168964341	chr6:168962609-168964341	3	-	168962609	168962609	8553170	2	292,622,	0,1110,
#Deleted in new
chr6	168999400	169000527	chr6:168999400-169000527	3	-	168999400	168999400	8553170	2	363,399,	0,728,
#Deleted in new
chr6	169033380	169034050	chr6:169033380-169034050	3	+	169033380	169033380	8553170	1	670,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	169034196	169035642	chr6:169034196-169035642	3	-	169034196	169034196	789624	2	864,70,	0,1376,
#Deleted in new
chr6	169067817	169069416	chr6:169067817-169069416	3	+	169067817	169067817	789624	2	165,228,	0,1371,
#Deleted in new
chr6	169067898	169069424	chr6:169067898-169069424	0	+	169067898	169067898	8553170	2	84,220,	0,1306,
#Partially deleted in new
chr6	169158091	169162924	chr6:169158091-169162924	0	-	169158091	169158091	789624	2	365,282,	0,4551,
#Partially deleted in new
chr6	169158144	169162856	chr6:169158144-169162856	1	-	169158144	169158144	8553170	3	312,147,214,	0,2923,4498,
#Partially deleted in new
chr6	169158260	169162301	chr6:169158260-169162301	3	-	169158260	169158260	789624	4	196,92,147,168,	0,784,2807,3873,
#Partially deleted in new
chr6	169213253	169239565	chr6:169213253-169239565	3	+	169213253	169213253	789624	3	325,314,341,	0,920,25971,
#Partially deleted in new
chr6	169215779	169254044	chr6:169215779-169254044	3	-	169217821	169250784	0	23	2050,140,98,272,228,235,119,160,108,219,153,128,174,177,171,97,141,197,85,557,74,173,55,	0,4418,5650,6417,7468,9365,10400,12342,13792,16200,16884,17110,18954,21390,21845,23819,24672,25982,30417,32637,34953,37944,38210,
#Partially deleted in new
chr6	169215793	169253838	chr6:169215793-169253838	1	-	169217821	169250784	8553170	22	2036,140,98,272,228,235,119,160,108,219,153,128,174,177,186,97,141,197,85,557,74,115,	0,4404,5636,6403,7454,9351,10386,12328,13778,16186,16870,17096,18940,21376,21816,23805,24658,25968,30403,32623,34939,37930,
#Partially deleted in new
chr6	169216191	169253832	chr6:169216191-169253832	1	-	169217821	169250784	0	22	1638,140,98,272,228,235,119,160,108,219,153,128,174,177,171,97,141,197,85,557,74,109,	0,4006,5238,6005,7056,8953,9988,11930,13380,15788,16472,16698,18542,20978,21433,23407,24260,25570,30005,32225,34541,37532,
#Partially deleted in new
chr6	169217453	169223440	chr6:169217453-169223440	0	-	169217453	169217453	8553170	5	172,140,98,272,193,	0,2744,3976,4743,5794,
#Partially deleted in new
chr6	169234509	169237412	chr6:169234509-169237412	0	-	169234509	169234509	8553170	2	398,243,	0,2660,
#Deleted in new
chr6	169246064	169248680	chr6:169246064-169248680	0	-	169246064	169246064	8553170	2	217,264,	0,2352,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	169248774	169252151	chr6:169248774-169252151	0	-	169248774	169250784	789624	3	199,74,164,	0,1958,3213,
#Partially deleted in new
chr6	169286533	169289216	chr6:169286533-169289216	3	-	169286533	169286533	8553170	3	222,165,92,	0,511,2591,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	169286533	169287476	chr6:169286533-169287476	1	-	169286533	169286533	8553170	2	222,432,	0,511,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	169296470	169297959	chr6:169296470-169297959	7	-	169296470	169296470	16724991	2	618,248,	0,1241,
#Partially deleted in new
chr6	169369997	169388385	chr6:169369997-169388385	0	-	169369997	169369997	8553170	2	403,185,	0,18203,
#Partially deleted in new
chr6	169373680	169388385	chr6:169373680-169388385	3	-	169373680	169373680	8553170	2	2097,185,	0,14520,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	169419003	169425156	chr6:169419003-169425156	3	-	169419003	169419003	8553170	2	2171,1987,	0,4166,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	169419968	169702047	chr6:169419968-169702047	3	-	169421160	169689005	8553170	8	1206,72,80,99,103,142,196,497,	0,10672,13354,162867,182250,252286,268848,281582,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	169420106	169701658	chr6:169420106-169701658	0	-	169420106	169420106	8553170	11	1068,72,80,101,244,99,103,98,122,98,108,	0,10534,13216,37427,38114,162729,182112,193452,212840,214321,281444,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	169426419	169452475	chr6:169426419-169452475	3	-	169426419	169426419	8553170	3	3804,72,231,	0,4221,25825,
#Partially deleted in new
chr6	169457211	169649233	chr6:169457211-169649233	0	-	169457211	169457211	8553170	10	423,99,103,98,122,98,122,90,98,36,	0,125624,145007,156347,175735,177216,181327,186485,190561,191986,
#Partially deleted in new
chr6	169457354	169701586	chr6:169457354-169701586	1	-	169457583	169689005	789624	22	280,99,103,98,122,98,134,122,90,98,78,79,83,122,68,104,121,121,71,142,196,36,	0,125481,144864,156204,175592,177073,179016,181184,186342,190418,191843,194575,200921,201731,202096,203308,204949,206811,208131,214900,231462,244196,
#Partially deleted in new
chr6	169558320	169667275	chr6:169558320-169667275	0	-	169558320	169558320	8553170	20	1607,99,103,98,122,98,122,90,98,78,79,83,122,68,104,121,87,121,71,140,	0,24515,43898,55238,74626,76107,80218,85376,89452,90877,93609,99955,100765,101130,102342,103983,105242,105845,107165,108815,
#Partially deleted in new
chr6	169647647	169660692	chr6:169647647-169660692	0	-	169647743	169660692	789624	7	223,78,79,83,122,68,30,	0,1550,4282,10628,11438,11803,13015,
#Partially deleted in new
chr6	169657758	169663723	chr6:169657758-169663723	0	-	169657758	169657758	8553170	7	288,83,122,68,104,121,161,	0,517,1327,1692,2904,4545,5804,
#Partially deleted in new
chr6	169657761	169702054	chr6:169657761-169702054	1	-	169657930	169689005	789624	14	285,83,122,68,104,121,121,71,52,125,142,196,182,504,	0,514,1324,1689,2901,4542,6404,7724,9374,12807,14493,31055,31365,43789,
#Partially deleted in new
chr6	169657779	169701930	chr6:169657779-169701930	0	-	169663765	169689005	8553170	16	267,83,122,68,104,121,316,121,71,52,204,125,142,196,182,380,	0,496,1306,1671,2883,4524,5783,6386,7706,9356,10202,12789,14475,31037,31347,43771,
#Partially deleted in new
chr6	169657793	169701939	chr6:169657793-169701939	0	-	169668694	169689005	8553170	16	253,83,122,68,104,121,144,467,241,422,1641,79,142,196,182,389,	0,482,1292,1657,2869,4510,5769,6372,6976,7341,9342,13085,14461,31023,31333,43757,
#Partially deleted in new
chr6	169660705	169702029	chr6:169660705-169702029	0	-	169664267	169689005	789624	9	61,121,87,121,71,125,142,196,479,	0,1598,2857,3460,4780,9863,11549,28111,40845,
#Deleted in new
chr6	169662366	169666658	chr6:169662366-169666658	0	-	169662366	169662366	8553170	4	58,121,71,242,	0,1799,3119,4050,
#Deleted in new
chr6	169664176	169665092	chr6:169664176-169665092	0	-	169664176	169664176	8553170	2	456,323,	0,593,
#Deleted in new
chr6	169664285	169670693	chr6:169664285-169670693	0	-	169664285	169664285	8553170	4	1271,52,114,125,	0,2850,3696,6283,
#Partially deleted in new
chr6	169666917	169702037	chr6:169666917-169702037	1	-	169668698	169689005	8553170	6	1859,125,142,196,182,487,	0,3651,5337,21899,22209,34633,
#Partially deleted in new
chr6	169669520	169701653	chr6:169669520-169701653	0	-	169669520	169669520	8553170	3	2876,196,103,	0,19296,32030,
#Partially deleted in new
chr6	169670356	169701854	chr6:169670356-169701854	0	-	169670356	169670356	8553170	6	601,142,196,182,603,304,	0,1898,18460,18770,24106,31194,
#Partially deleted in new
chr6	169672321	169702048	chr6:169672321-169702048	0	-	169672321	169689005	789624	4	75,196,182,498,	0,16495,16805,29229,
#Deleted in new
chr6	169702189	169704856	chr6:169702189-169704856	3	+	169702459	169703035	789624	1	2667,	0,
#Partially deleted in new
chr6	169703904	169724055	chr6:169703904-169724055	3	-	169704002	169723931	789624	12	184,189,109,156,154,110,150,134,84,131,107,211,	0,1228,1711,6331,8481,10828,11803,12050,13918,14883,17100,19940,
#Partially deleted in new
chr6	169703904	169723931	chr6:169703904-169723931	1	-	169704002	169723931	789624	12	184,189,109,156,154,110,150,134,78,131,107,87,	0,1228,1711,6331,8481,10828,11803,12050,13918,14883,17100,19940,
#Partially deleted in new
chr6	169703907	169725566	chr6:169703907-169725566	1	-	169704002	169721057	789624	12	181,189,109,156,154,110,150,134,84,131,107,146,	0,1225,1708,6328,8478,10825,11800,12047,13915,14880,17097,21513,
#Partially deleted in new
chr6	169707027	169724005	chr6:169707027-169724005	0	-	169707027	169707027	8553170	8	3364,154,150,134,84,131,107,161,	0,5358,8680,8927,10795,11760,13977,16817,
#Partially deleted in new
chr6	169707027	169724005	chr6:169707027-169724005	1	-	169710214	169723931	789624	9	3364,154,110,150,134,84,131,107,161,	0,5358,7705,8680,8927,10795,11760,13977,16817,
#Partially deleted in new
chr6	169717741	169719298	chr6:169717741-169719298	0	-	169717741	169717741	8553170	2	165,511,	0,1046,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	169725090	169725854	chr6:169725090-169725854	3	-	169725090	169725090	8553170	3	226,149,28,	0,330,736,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	169725503	169738992	chr6:169725503-169738992	3	+	169725503	169725503	8553170	2	36,299,	0,13190,
#Partially deleted in new
chr6	169740113	169751559	chr6:169740113-169751559	3	-	169740184	169751458	789624	4	182,159,207,221,	0,2966,3954,11225,
#Deleted in new
chr6	169749509	169751587	chr6:169749509-169751587	0	-	169749509	169749509	789624	1	2078,	0,
#Partially deleted in new
chr6	169751621	169781584	chr6:169751621-169781584	1	+	169751657	169781513	789624	18	42,169,140,102,90,98,137,115,103,30,69,174,84,77,126,78,114,255,	0,2242,3661,4716,5097,7346,8216,9020,10807,15016,16481,17918,21697,23648,24318,24712,27560,29708,
#Partially deleted in new
chr6	169751621	169759060	chr6:169751621-169759060	0	+	169756400	169759060	789624	6	42,89,140,102,90,93,	0,2322,3661,4716,5097,7346,
#Partially deleted in new
chr6	169751621	169756735	chr6:169751621-169756735	0	+	169756400	169756735	789624	6	42,86,169,135,102,17,	0,1665,2242,3666,4716,5097,
#Partially deleted in new
chr6	169751624	169781584	chr6:169751624-169781584	3	+	169751657	169781513	789624	18	39,169,140,102,90,98,137,115,103,30,69,174,84,77,126,219,114,255,	0,2239,3658,4713,5094,7343,8213,9017,10804,15013,16478,17915,21694,23645,24315,24830,27557,29705,
#Partially deleted in new
chr6	169751624	169781520	chr6:169751624-169781520	1	+	169756400	169781513	789624	17	39,140,102,90,98,137,115,103,30,69,174,84,77,126,219,114,191,	0,3658,4713,5094,7343,8213,9017,10804,15013,16478,17915,21694,23645,24315,24830,27557,29705,
#Partially deleted in new
chr6	169751624	169758984	chr6:169751624-169758984	0	+	169751657	169755334	789624	6	39,169,135,102,90,17,	0,2239,3663,4713,5094,7343,
#Partially deleted in new
chr6	169751624	169756764	chr6:169751624-169756764	0	+	169756400	169756764	789624	6	39,56,169,140,102,46,	0,1692,2239,3658,4713,5094,
#Partially deleted in new
chr6	169751637	169781516	chr6:169751637-169781516	1	+	169751657	169781513	789624	17	26,169,140,102,90,98,137,115,103,30,69,174,84,77,126,114,187,	0,2226,3645,4700,5081,7330,8200,9004,10791,15000,16465,17902,21681,23632,24302,27544,29692,
#Partially deleted in new
chr6	169751637	169759857	chr6:169751637-169759857	0	+	169751657	169759857	789624	6	26,169,140,90,98,20,	0,2226,3645,5081,7330,8200,
#Partially deleted in new
chr6	169751637	169755655	chr6:169751637-169755655	0	+	169751637	169751637	8553170	3	26,169,373,	0,2226,3645,
#Partially deleted in new
chr6	169751647	169756415	chr6:169751647-169756415	0	+	169756400	169756415	8553170	5	16,144,169,140,78,	0,1390,2216,3635,4690,
#Partially deleted in new
chr6	169751796	169781517	chr6:169751796-169781517	1	+	169756400	169781513	789624	17	141,169,140,102,90,98,137,115,103,69,174,84,77,126,219,114,188,	0,2067,3486,4541,4922,7171,8041,8845,10632,16306,17743,21522,23473,24143,24658,27385,29533,
#Partially deleted in new
chr6	169753904	169759923	chr6:169753904-169759923	0	+	169753904	169756348	789624	5	128,102,90,98,86,	0,2433,2814,5063,5933,
#Partially deleted in new
chr6	169767014	169781584	chr6:169767014-169781584	0	+	169767014	169767014	8553170	8	1157,174,84,77,126,219,114,255,	0,2525,6304,8255,8925,9440,12167,14315,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	169770412	169772042	chr6:169770412-169772042	3	+	169770412	169770412	8553170	1	1630,	0,
#Partially deleted in new
chr6	169773043	169776550	chr6:169773043-169776550	0	+	169773043	169773043	8553170	4	359,77,126,96,	0,2226,2896,3411,
#Partially deleted in new
chr6	169775877	169781516	chr6:169775877-169781516	0	+	169775877	169775877	8553170	4	188,219,114,187,	0,577,3304,5452,
#Deleted in new
chr6	169788789	169798825	chr6:169788789-169798825	3	-	169788789	169788789	789624	2	2329,89,	0,9947,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr6	169790320	169802873	chr6:169790320-169802873	3	+	169790320	169790320	789624	3	96,179,2043,	0,4863,10510,
#Deleted in new
chr6	169794243	169799549	chr6:169794243-169799549	1	-	169794243	169794243	8553170	2	1354,813,	0,4493,
#Deleted in new
chr6	169809317	169810102	chr6:169809317-169810102	3	-	169809317	169809317	8553170	2	176,518,	0,267,
#Deleted in new
chr6	170162516	170163027	chr6:170162516-170163027	3	+	170162516	170162516	8553170	2	212,217,	0,294,
#Deleted in new
chr6	170178680	170179660	chr6:170178680-170179660	3	+	170178680	170178680	8553170	1	980,	0,
#Deleted in new
chr6	170199768	170200258	chr6:170199768-170200258	7	+	170199768	170199768	16724991	1	490,	0,
#Partially deleted in new
chr6	170254333	170262569	chr6:170254333-170262569	3	-	170254333	170254333	789624	3	1044,132,154,	0,4036,8082,
#Partially deleted in new
chr6	170266668	170276762	chr6:170266668-170276762	3	-	170266668	170266668	789624	3	1617,258,78,	0,8662,10016,
#Partially deleted in new
chr6	170272473	170279887	chr6:170272473-170279887	3	+	170272473	170272473	789624	2	2957,308,	0,7106,
#Partially deleted in new
chr6	170275373	170279469	chr6:170275373-170279469	0	+	170275373	170275373	8553170	2	57,261,	0,3835,
#Partially deleted in new
chr6	170276938	170279469	chr6:170276938-170279469	0	+	170276938	170276938	8553170	2	85,261,	0,2270,
#Partially deleted in new
chr6	170282205	170290473	chr6:170282205-170290473	1	-	170282873	170290139	0	11	674,118,799,217,170,131,61,258,61,297,388,	0,782,1025,2713,3048,3363,4032,6033,6523,7306,7880,
#Partially deleted in new
chr6	170289700	170306565	chr6:170289700-170306565	2	-	170289700	170290139	789624	3	108,400,40,	0,385,16825,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	170290702	170405348	chr6:170290702-170405348	1	+	170291057	170404590	789624	11	370,1755,181,102,173,93,207,109,93,52,586,	0,26667,32376,39746,57448,67523,97584,100310,104784,113847,114060,
#Partially deleted in new
chr6	170295320	170405076	chr6:170295320-170405076	1	+	170295405	170404590	789624	11	133,1755,181,102,173,93,207,109,93,52,314,	0,22049,27758,35128,52830,62905,92966,95692,100166,109229,109442,
#Partially deleted in new
chr6	170297875	170298375	chr6:170297875-170298375	3	-	170297875	170297875	8553170	1	500,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr6	170306755	170407065	chr6:170306755-170407065	3	+	170317390	170404590	789624	11	87,1755,181,102,173,93,207,109,93,52,2303,	0,10614,16323,23693,41395,51470,81531,84257,88731,97794,98007,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr6	170306757	170405642	chr6:170306757-170405642	1	+	170330537	170404590	789624	9	85,102,173,93,207,109,93,52,880,	0,23691,41393,51468,81529,84255,88729,97792,98005,
#Deleted in new
chr6	170330760	170330844	chr6:170330760-170330844	3	+	170330760	170330760	5263520	1	84,	0,
#Deleted in new
chr6	170404178	170405078	chr6:170404178-170405078	0	+	170404178	170404178	8553170	2	423,316,	0,584,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr6	170414138	170419325	chr6:170414138-170419325	3	+	170414138	170414138	8553170	1	5187,	0,
#Partially deleted in new
chr6	170535116	170553341	chr6:170535116-170553341	3	-	170535219	170553242	0	6	289,107,130,82,108,212,	0,2117,8484,10986,13889,18013,
#Partially deleted in new
chr6	170535221	170550441	chr6:170535221-170550441	0	-	170535221	170535221	8553170	5	184,107,130,82,1436,	0,2012,8379,10881,13784,
#Partially deleted in new
chr6	170554301	170566957	chr6:170554301-170566957	0	+	170557029	170566957	789624	5	162,202,443,88,40,	0,2580,7489,10243,12616,
#Partially deleted in new
chr6	170554332	170572869	chr6:170554332-170572869	1	+	170557029	170572265	0	8	131,202,443,88,92,168,95,684,	0,2549,7458,10212,12585,15279,17077,17853,
#Partially deleted in new
chr6	170554332	170572869	chr6:170554332-170572869	3	+	170561796	170572265	0	7	131,443,88,92,168,95,684,	0,7458,10212,12585,15279,17077,17853,
#Partially deleted in new
chr6	170554332	170572869	chr6:170554332-170572869	1	+	170557029	170572265	789624	9	131,202,120,170,88,92,168,95,684,	0,2549,7458,7731,10212,12585,15279,17077,17853,
#Partially deleted in new
chr6	170554378	170572870	chr6:170554378-170572870	1	+	170557029	170572265	0	8	85,205,443,88,92,168,95,685,	0,2500,7412,10166,12539,15233,17031,17807,
#Partially deleted in new
chr6	170554604	170562188	chr6:170554604-170562188	0	+	170557029	170562188	789624	3	100,205,398,	0,2274,7186,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr6	170556941	170572832	chr6:170556941-170572832	0	+	170557029	170567295	789624	8	142,443,88,92,280,168,95,647,	0,4849,7603,9976,10284,12670,14468,15244,
#Partially deleted in new
chr6	170569611	170572853	chr6:170569611-170572853	0	+	170569611	170572265	789624	3	129,95,668,	0,1798,2574,
#Partially deleted in new
chr6	170575294	170584660	chr6:170575294-170584660	3	-	170577558	170584581	789624	6	2423,114,104,132,243,362,	0,3562,4707,7762,8210,9004,
#Deleted in new
chr6	170575327	170579721	chr6:170575327-170579721	0	-	170575327	170575327	8553170	2	2390,865,	0,3529,
#Partially deleted in new
chr6	170577435	170584645	chr6:170577435-170584645	0	-	170578962	170584581	789624	5	282,114,132,243,347,	0,1421,5621,6069,6863,
#Partially deleted in new
chr6	170577558	170584581	chr6:170577558-170584581	1	-	170577558	170584581	789624	7	159,114,104,132,243,94,90,	0,1298,2443,5498,5946,6740,6933,
#Partially deleted in new
chr6	170577593	170584605	chr6:170577593-170584605	0	-	170583606	170584581	789624	6	124,114,104,132,119,307,	0,1263,2408,5463,5911,6705,
#Partially deleted in new
chr6	170578481	170584612	chr6:170578481-170584612	1	-	170578635	170584581	789624	6	175,114,104,132,243,314,	0,375,1520,4575,5023,5817,
#Partially deleted in new
chr6	170578506	170584389	chr6:170578506-170584389	0	-	170583606	170584389	789624	6	150,114,104,132,119,91,	0,350,1495,4550,4998,5792,
#Partially deleted in new
chr6	170578882	170584404	chr6:170578882-170584404	0	-	170583606	170584404	789624	4	88,132,119,106,	0,4174,4622,5416,
#Partially deleted in new
chr6	170580092	170584226	chr6:170580092-170584226	0	-	170580092	170580092	8553170	4	13,132,243,172,	0,2964,3412,3962,
#Deleted in new
chr6	170581088	170584612	chr6:170581088-170584612	1	-	170583027	170584581	789624	3	2100,243,314,	0,2416,3210,
#Deleted in new
chr6	170581744	170584615	chr6:170581744-170584615	1	-	170582257	170584581	789624	5	521,132,243,94,124,	0,1312,1760,2554,2747,
#Deleted in new
chr6	170581746	170584692	chr6:170581746-170584692	0	-	170583606	170584581	789624	4	519,132,119,394,	0,1310,1758,2552,
#Deleted in new
chr6	170581747	170584692	chr6:170581747-170584692	1	-	170582257	170584581	789624	4	518,132,243,394,	0,1309,1757,2551,
#Deleted in new
chr6	170581791	170584654	chr6:170581791-170584654	1	-	170583027	170584581	789624	4	1397,243,94,163,	0,1713,2507,2700,
#Deleted in new
chr6	170582848	170584421	chr6:170582848-170584421	0	-	170583606	170584421	789624	3	340,119,123,	0,656,1450,
#Deleted in new
chr6	170639605	170640536	chr6:170639605-170640536	7	+	170639605	170639605	16724991	1	931,	0,
#Partially deleted in new
chr6	170651011	170651338	chr6:170651011-170651338	7	-	170651011	170651011	16724991	1	327,	0,
#Deleted in new
chr6	170695312	170696950	chr6:170695312-170696950	3	+	170695312	170695312	8553170	3	92,267,447,	0,787,1191,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	170725196	170728488	chr6:170725196-170728488	3	+	170725196	170725196	8553170	2	200,558,	0,2734,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr6	170735750	170736545	chr6:170735750-170736545	3	+	170735750	170735750	8553170	2	135,198,	0,597,
#Partially deleted in new
chr6	170736172	170737777	chr6:170736172-170737777	3	-	170736172	170736172	8553170	3	222,51,166,	0,1328,1439,
#Deleted in new
chr6	170745517	170745977	chr6:170745517-170745977	7	+	170745517	170745517	16724991	1	460,	0,
#Deleted in new
chr6_GL000250v2_alt	49217	49589	chr6_GL000250v2_alt:49217-49589	7	-	49217	49217	16724991	1	372,	0,
#Deleted in new
chr6_GL000250v2_alt	103453	104591	chr6_GL000250v2_alt:103453-104591	3	-	103453	103453	8553170	2	452,257,	0,881,
#Deleted in new
chr6_GL000250v2_alt	125208	128934	chr6_GL000250v2_alt:125208-128934	3	-	125208	125208	8553170	2	2391,67,	0,3659,
#Deleted in new
chr6_GL000250v2_alt	126999	127631	chr6_GL000250v2_alt:126999-127631	7	+	126999	126999	16724991	1	632,	0,
#Deleted in new
chr6_GL000250v2_alt	154415	155490	chr6_GL000250v2_alt:154415-155490	7	-	154415	154415	16724991	1	1075,	0,
#Deleted in new
chr6_GL000250v2_alt	162113	162906	chr6_GL000250v2_alt:162113-162906	3	+	162113	162113	789624	2	201,212,	0,581,
#Deleted in new
chr6_GL000250v2_alt	168585	189573	chr6_GL000250v2_alt:168585-189573	1	-	169838	189217	789624	9	1272,112,27,33,116,23,231,96,776,	0,1552,4234,5806,5971,8695,17011,18891,20212,
#Deleted in new
chr6_GL000250v2_alt	168585	174573	chr6_GL000250v2_alt:168585-174573	0	-	169653	174573	789624	5	1664,27,72,33,17,	0,4234,4490,5806,5971,
#Deleted in new
chr6_GL000250v2_alt	168585	189574	chr6_GL000250v2_alt:168585-189574	3	-	169653	189217	789624	8	1664,27,33,116,23,231,96,777,	0,4234,5806,5971,8695,17011,18891,20212,
#Deleted in new
chr6_GL000250v2_alt	168585	189498	chr6_GL000250v2_alt:168585-189498	0	-	168585	168585	8553170	6	5839,116,23,231,96,701,	0,5971,8695,17011,18891,20212,
#Deleted in new
chr6_GL000250v2_alt	170057	173168	chr6_GL000250v2_alt:170057-173168	0	-	170057	170057	8553170	2	192,349,	0,2762,
#Deleted in new
chr6_GL000250v2_alt	176890	187561	chr6_GL000250v2_alt:176890-187561	0	-	176890	176890	8553170	3	413,231,85,	0,8706,10586,
#Deleted in new
chr6_GL000250v2_alt	180360	185768	chr6_GL000250v2_alt:180360-185768	0	-	180360	180360	8553170	2	515,172,	0,5236,
#Deleted in new
chr6_GL000250v2_alt	181229	181329	chr6_GL000250v2_alt:181229-181329	3	+	181229	181229	8553170	1	100,	0,
#Deleted in new
chr6_GL000250v2_alt	251787	253069	chr6_GL000250v2_alt:251787-253069	3	+	251787	251787	8553170	3	30,194,808,	0,110,474,
#Deleted in new
chr6_GL000250v2_alt	252384	254160	chr6_GL000250v2_alt:252384-254160	3	+	252384	252384	8553170	2	80,237,	0,1539,
#Deleted in new
chr6_GL000250v2_alt	260408	270885	chr6_GL000250v2_alt:260408-270885	3	-	260624	269578	789624	7	1802,105,127,92,82,269,253,	0,3949,4702,5171,8728,9161,10224,
#Deleted in new
chr6_GL000250v2_alt	260408	270941	chr6_GL000250v2_alt:260408-270941	0	-	260408	260408	8553170	6	1802,105,561,82,168,309,	0,3949,4702,8728,9113,10224,
#Deleted in new
chr6_GL000250v2_alt	292304	293232	chr6_GL000250v2_alt:292304-293232	7	-	292304	292304	16724991	1	928,	0,
#Deleted in new
chr6_GL000250v2_alt	309837	310865	chr6_GL000250v2_alt:309837-310865	3	-	309837	310800	789624	1	1028,	0,
#Deleted in new
chr6_GL000250v2_alt	351929	352936	chr6_GL000250v2_alt:351929-352936	3	-	351929	352871	789624	1	1007,	0,
#Deleted in new
chr6_GL000250v2_alt	366572	367511	chr6_GL000250v2_alt:366572-367511	7	+	366572	366572	16724991	1	939,	0,
#Deleted in new
chr6_GL000250v2_alt	377510	378446	chr6_GL000250v2_alt:377510-378446	3	+	377510	378446	789624	1	936,	0,
#Deleted in new
chr6_GL000250v2_alt	389828	394527	chr6_GL000250v2_alt:389828-394527	3	+	389828	389828	8553170	2	137,252,	0,4447,
#Deleted in new
chr6_GL000250v2_alt	403495	404432	chr6_GL000250v2_alt:403495-404432	7	-	403495	403495	16724991	1	937,	0,
#Deleted in new
chr6_GL000250v2_alt	438928	440200	chr6_GL000250v2_alt:438928-440200	3	+	439261	440200	789624	1	1272,	0,
#Deleted in new
chr6_GL000250v2_alt	532564	532719	chr6_GL000250v2_alt:532564-532719	3	+	532564	532564	789624	1	155,	0,
#Deleted in new
chr6_GL000250v2_alt	534095	535055	chr6_GL000250v2_alt:534095-535055	7	-	534095	534095	16724991	1	960,	0,
#Deleted in new
chr6_GL000250v2_alt	556362	557305	chr6_GL000250v2_alt:556362-557305	7	+	556362	556362	16724991	1	943,	0,
#Deleted in new
chr6_GL000250v2_alt	572355	573321	chr6_GL000250v2_alt:572355-573321	3	+	572355	573321	789624	1	966,	0,
#Deleted in new
chr6_GL000250v2_alt	688273	697631	chr6_GL000250v2_alt:688273-697631	3	-	688273	688273	8553170	3	76,38,104,	0,418,9254,
#Deleted in new
chr6_GL000250v2_alt	691168	722731	chr6_GL000250v2_alt:691168-722731	3	-	692358	693306	789624	5	2229,48,125,124,85,	0,3408,4796,6359,31478,
#Deleted in new
chr6_GL000250v2_alt	691168	694131	chr6_GL000250v2_alt:691168-694131	1	-	692358	693306	789624	2	2229,253,	0,2710,
#Deleted in new
chr6_GL000250v2_alt	691168	693397	chr6_GL000250v2_alt:691168-693397	1	-	692358	693306	789624	1	2229,	0,
#Deleted in new
chr6_GL000250v2_alt	704969	706618	chr6_GL000250v2_alt:704969-706618	3	+	705679	706618	789624	1	1649,	0,
#Deleted in new
chr6_GL000250v2_alt	705602	706641	chr6_GL000250v2_alt:705602-706641	1	+	705673	706618	789624	1	1039,	0,
#Deleted in new
chr6_GL000250v2_alt	710534	715763	chr6_GL000250v2_alt:710534-715763	3	-	710534	710534	8553170	2	4,142,	0,5087,
#Deleted in new
chr6_GL000250v2_alt	722840	729989	chr6_GL000250v2_alt:722840-729989	3	+	727430	728381	789624	4	27,116,51,2830,	0,1273,3224,4319,
#Deleted in new
chr6_GL000250v2_alt	722847	729989	chr6_GL000250v2_alt:722847-729989	1	+	727430	728381	789624	4	20,116,51,2834,	0,1266,3217,4308,
#Deleted in new
chr6_GL000250v2_alt	722862	726747	chr6_GL000250v2_alt:722862-726747	0	+	722862	722862	8553170	4	5,116,164,211,	0,1251,2818,3674,
#Deleted in new
chr6_GL000250v2_alt	725430	729989	chr6_GL000250v2_alt:725430-729989	1	+	727430	728381	789624	3	414,1259,580,	0,1705,3979,
#Deleted in new
chr6_GL000250v2_alt	727100	728394	chr6_GL000250v2_alt:727100-728394	1	+	727430	728381	789624	1	1294,	0,
#Deleted in new
chr6_GL000250v2_alt	727155	728381	chr6_GL000250v2_alt:727155-728381	0	+	727155	727155	8553170	2	256,717,	0,509,
#Deleted in new
chr6_GL000250v2_alt	727155	728381	chr6_GL000250v2_alt:727155-728381	0	+	727155	727155	8553170	2	256,730,	0,496,
#Deleted in new
chr6_GL000250v2_alt	730256	735467	chr6_GL000250v2_alt:730256-735467	7	-	730256	730256	16724991	2	359,22,	0,5189,
#Deleted in new
chr6_GL000250v2_alt	740685	741732	chr6_GL000250v2_alt:740685-741732	7	-	740685	740685	16724991	1	1047,	0,
#Deleted in new
chr6_GL000250v2_alt	752426	753563	chr6_GL000250v2_alt:752426-753563	3	-	752426	753563	789624	1	1137,	0,
#Deleted in new
chr6_GL000250v2_alt	754932	755338	chr6_GL000250v2_alt:754932-755338	7	-	754932	754932	16724991	1	406,	0,
#Deleted in new
chr6_GL000250v2_alt	763170	776217	chr6_GL000250v2_alt:763170-776217	3	+	763170	763170	8553170	4	31,57,500,289,	0,7811,9659,12758,
#Deleted in new
chr6_GL000250v2_alt	795086	799235	chr6_GL000250v2_alt:795086-799235	3	+	795086	795086	789624	3	165,95,2517,	0,529,1632,
#Deleted in new
chr6_GL000250v2_alt	795142	797824	chr6_GL000250v2_alt:795142-797824	0	+	795142	795142	8553170	4	109,95,117,78,	0,473,1576,2604,
#Deleted in new
chr6_GL000250v2_alt	803370	804454	chr6_GL000250v2_alt:803370-804454	7	-	803370	803370	16724991	1	1084,	0,
#Deleted in new
chr6_GL000250v2_alt	818912	819860	chr6_GL000250v2_alt:818912-819860	7	+	818912	818912	16724991	1	948,	0,
#Deleted in new
chr6_GL000250v2_alt	821306	825621	chr6_GL000250v2_alt:821306-825621	3	-	821574	825397	789624	2	739,251,	0,4064,
#Deleted in new
chr6_GL000250v2_alt	821306	893756	chr6_GL000250v2_alt:821306-893756	3	-	869267	893509	0	19	739,176,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,553,	0,47959,48912,49278,49987,50809,51316,51521,53020,53648,55343,56970,57662,65507,66158,66510,67711,68296,71897,
#Deleted in new
chr6_GL000250v2_alt	839602	840530	chr6_GL000250v2_alt:839602-840530	7	+	839602	839602	16724991	1	928,	0,
#Deleted in new
chr6_GL000250v2_alt	843153	843443	chr6_GL000250v2_alt:843153-843443	7	+	843153	843153	16724991	1	290,	0,
#Deleted in new
chr6_GL000250v2_alt	847942	848026	chr6_GL000250v2_alt:847942-848026	3	+	847942	847942	789624	1	84,	0,
#Deleted in new
chr6_GL000250v2_alt	848201	848719	chr6_GL000250v2_alt:848201-848719	7	+	848201	848201	16724991	1	518,	0,
#Deleted in new
chr6_GL000250v2_alt	853147	854731	chr6_GL000250v2_alt:853147-854731	3	+	853637	854576	789624	1	1584,	0,
#Deleted in new
chr6_GL000250v2_alt	867954	898852	chr6_GL000250v2_alt:867954-898852	1	-	869267	898103	0	22	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,204,85,285,	0,2264,2630,3339,4161,4668,4873,6372,7000,8695,10322,11014,18859,19510,19862,21063,21648,25249,26850,29159,30064,30613,
#Deleted in new
chr6_GL000250v2_alt	867954	898877	chr6_GL000250v2_alt:867954-898877	1	-	869267	898103	0	23	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,186,204,85,310,	0,2264,2630,3339,4161,4668,4873,6372,7000,8695,10322,11014,18859,19510,19862,21063,21648,25249,26850,28221,29159,30064,30613,
#Deleted in new
chr6_GL000250v2_alt	867954	893731	chr6_GL000250v2_alt:867954-893731	1	-	869267	893509	0	18	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,528,	0,2264,2630,3339,4161,4668,4873,6372,7000,8695,10322,11014,18859,19510,19862,21063,21648,25249,
#Deleted in new
chr6_GL000250v2_alt	867954	874459	chr6_GL000250v2_alt:867954-874459	0	-	867954	867954	8553170	5	1350,94,108,117,133,	0,4161,4668,4873,6372,
#Deleted in new
chr6_GL000250v2_alt	867954	898651	chr6_GL000250v2_alt:867954-898651	0	-	867954	867954	8553170	23	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,122,204,85,84,	0,2264,2630,3339,4161,4668,4873,6372,7000,8695,10322,11014,18859,19510,19862,21063,21648,25249,26850,28285,29159,30064,30613,
#Deleted in new
chr6_GL000250v2_alt	867954	898103	chr6_GL000250v2_alt:867954-898103	1	-	869267	898103	0	22	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,186,204,85,	0,2264,2630,3339,4161,4668,4873,6372,7000,8695,10322,11014,18859,19510,19862,21063,21648,25249,26850,28221,29159,30064,
#Deleted in new
chr6_GL000250v2_alt	869038	870874	chr6_GL000250v2_alt:869038-870874	0	-	869038	869038	8553170	3	403,144,290,	0,1180,1546,
#Deleted in new
chr6_GL000250v2_alt	870637	898103	chr6_GL000250v2_alt:870637-898103	0	-	870637	870637	8553170	19	76,128,94,108,117,133,78,64,243,192,66,102,171,135,161,21,186,204,85,	0,656,1478,1985,2190,3689,6012,7639,8331,16176,16827,17179,18380,18965,22566,24167,25538,26476,27381,
#Deleted in new
chr6_GL000250v2_alt	871134	872314	chr6_GL000250v2_alt:871134-872314	0	-	871134	871134	8553170	2	287,199,	0,981,
#Deleted in new
chr6_GL000250v2_alt	874179	878325	chr6_GL000250v2_alt:874179-878325	0	-	874179	874179	8553170	3	280,78,49,	0,2470,4097,
#Deleted in new
chr6_GL000250v2_alt	874430	898105	chr6_GL000250v2_alt:874430-898105	1	-	874430	898103	0	14	29,78,64,243,192,66,102,171,135,161,21,186,204,87,	0,2219,3846,4538,12383,13034,13386,14587,15172,18773,20374,21745,22683,23588,
#Deleted in new
chr6_GL000250v2_alt	887516	889974	chr6_GL000250v2_alt:887516-889974	0	-	887516	887516	8553170	4	14,102,171,372,	0,300,1501,2086,
#Deleted in new
chr6_GL000250v2_alt	895616	898784	chr6_GL000250v2_alt:895616-898784	0	-	895616	895616	8553170	4	745,204,85,217,	0,1497,2402,2951,
#Deleted in new
chr6_GL000250v2_alt	901772	902056	chr6_GL000250v2_alt:901772-902056	7	-	901772	901772	16724991	1	284,	0,
#Deleted in new
chr6_GL000250v2_alt	922689	938078	chr6_GL000250v2_alt:922689-938078	1	+	922918	936889	0	7	317,348,114,21,21,21,1203,	0,2336,9166,10657,10918,13715,14186,
#Deleted in new
chr6_GL000250v2_alt	922707	938080	chr6_GL000250v2_alt:922707-938080	3	+	922918	936889	0	8	299,348,114,21,21,117,21,1205,	0,2318,9148,10639,10900,13277,13697,14168,
#Deleted in new
chr6_GL000250v2_alt	922756	931964	chr6_GL000250v2_alt:922756-931964	0	+	922756	922756	8553170	3	250,343,109,	0,2274,9099,
#Deleted in new
chr6_GL000250v2_alt	922800	938080	chr6_GL000250v2_alt:922800-938080	1	+	922918	936583	0	7	206,348,114,21,21,117,1676,	0,2225,9055,10546,10807,13184,13604,
#Deleted in new
chr6_GL000250v2_alt	922838	925631	chr6_GL000250v2_alt:922838-925631	0	+	922838	922838	8553170	2	168,606,	0,2187,
#Deleted in new
chr6_GL000250v2_alt	922918	938080	chr6_GL000250v2_alt:922918-938080	1	+	922918	936889	0	8	88,348,114,21,21,48,21,1205,	0,2107,8937,10428,10689,12959,13486,13957,
#Deleted in new
chr6_GL000250v2_alt	922918	938080	chr6_GL000250v2_alt:922918-938080	1	+	922918	937154	789624	8	88,348,114,21,21,117,21,955,	0,2107,8937,10428,10689,13066,13486,14207,
#Deleted in new
chr6_GL000250v2_alt	922918	938080	chr6_GL000250v2_alt:922918-938080	1	+	922918	937154	0	7	88,348,114,21,21,21,955,	0,2107,8937,10428,10689,13486,14207,
#Deleted in new
chr6_GL000250v2_alt	922918	938080	chr6_GL000250v2_alt:922918-938080	1	+	922918	936889	0	7	88,114,21,21,117,21,1205,	0,8937,10428,10689,13066,13486,13957,
#Deleted in new
chr6_GL000250v2_alt	922918	938080	chr6_GL000250v2_alt:922918-938080	1	+	922918	937154	0	8	88,348,114,21,21,48,21,955,	0,2107,8937,10428,10689,12959,13486,14207,
#Deleted in new
chr6_GL000250v2_alt	922924	938080	chr6_GL000250v2_alt:922924-938080	0	+	922924	937154	0	6	82,348,114,21,21,955,	0,2101,8931,10422,10683,14201,
#Deleted in new
chr6_GL000250v2_alt	925025	938080	chr6_GL000250v2_alt:925025-938080	0	+	925025	936889	789624	6	348,114,21,21,21,1205,	0,6830,8321,8582,11379,11850,
#Deleted in new
chr6_GL000250v2_alt	925025	938080	chr6_GL000250v2_alt:925025-938080	0	+	925025	925025	8553170	8	348,138,114,21,21,117,21,1205,	0,5308,6830,8321,8582,10959,11379,11850,
#Deleted in new
chr6_GL000250v2_alt	925025	938080	chr6_GL000250v2_alt:925025-938080	0	+	925025	925025	8553170	8	348,138,114,21,21,117,21,955,	0,5308,6830,8321,8582,10959,11379,12100,
#Deleted in new
chr6_GL000250v2_alt	938190	938841	chr6_GL000250v2_alt:938190-938841	3	-	938207	938841	789624	1	651,	0,
#Deleted in new
chr6_GL000250v2_alt	1056692	1058580	chr6_GL000250v2_alt:1056692-1058580	5	+	1056692	1056692	16724991	4	14,68,254,313,	0,847,1190,1575,
#Deleted in new
chr6_GL000250v2_alt	1057184	1063412	chr6_GL000250v2_alt:1057184-1063412	5	+	1057184	1057184	16724991	7	47,68,196,429,191,1981,460,	0,355,756,1083,1979,2341,5768,
#Deleted in new
chr6_GL000250v2_alt	1057585	1058560	chr6_GL000250v2_alt:1057585-1058560	7	-	1057585	1057585	16724991	1	975,	0,
#Deleted in new
chr6_GL000250v2_alt	1058053	1063412	chr6_GL000250v2_alt:1058053-1063412	7	+	1058053	1058053	16724991	3	83,249,4249,	0,214,1110,
#Deleted in new
chr6_GL000250v2_alt	1058064	1058946	chr6_GL000250v2_alt:1058064-1058946	5	+	1058064	1058064	16724991	3	72,249,192,	0,203,690,
#Deleted in new
chr6_GL000250v2_alt	1066037	1068045	chr6_GL000250v2_alt:1066037-1068045	7	+	1066037	1066037	16724991	5	258,276,117,37,46,	0,846,1246,1775,1962,
#Deleted in new
chr6_GL000250v2_alt	1068816	1069613	chr6_GL000250v2_alt:1068816-1069613	7	-	1068816	1068816	16724991	1	797,	0,
#Deleted in new
chr6_GL000250v2_alt	1078184	1078316	chr6_GL000250v2_alt:1078184-1078316	7	-	1078184	1078184	16724991	1	132,	0,
#Deleted in new
chr6_GL000250v2_alt	1092578	1096751	chr6_GL000250v2_alt:1092578-1096751	1	+	1092650	1095994	789624	8	78,82,270,276,276,117,33,372,	0,869,1080,1576,2451,2849,3411,3801,
#Deleted in new
chr6_GL000250v2_alt	1092590	1096748	chr6_GL000250v2_alt:1092590-1096748	1	+	1093456	1095994	789624	8	66,185,270,276,276,117,92,300,	0,754,1068,1564,2439,2837,3399,3858,
#Deleted in new
chr6_GL000250v2_alt	1092996	1093977	chr6_GL000250v2_alt:1092996-1093977	7	-	1092996	1092996	16724991	1	981,	0,
#Deleted in new
chr6_GL000250v2_alt	1093432	1096751	chr6_GL000250v2_alt:1093432-1096751	3	+	1093456	1095994	789624	7	97,270,276,276,117,33,372,	0,226,722,1597,1995,2557,2947,
#Deleted in new
chr6_GL000250v2_alt	1093456	1096751	chr6_GL000250v2_alt:1093456-1096751	1	+	1093456	1095994	789624	6	73,270,276,117,33,372,	0,202,1573,1971,2533,2923,
#Deleted in new
chr6_GL000250v2_alt	1093456	1096751	chr6_GL000250v2_alt:1093456-1096751	0	+	1093456	1093456	8553170	6	73,270,276,515,33,372,	0,202,698,1573,2533,2923,
#Deleted in new
chr6_GL000250v2_alt	1093456	1096751	chr6_GL000250v2_alt:1093456-1096751	0	+	1093456	1095994	789624	7	73,270,276,117,33,48,372,	0,202,1573,1971,2533,2708,2923,
#Deleted in new
chr6_GL000250v2_alt	1093456	1096751	chr6_GL000250v2_alt:1093456-1096751	1	+	1093456	1095994	0	5	73,270,117,33,372,	0,202,1971,2533,2923,
#Deleted in new
chr6_GL000250v2_alt	1117759	1117891	chr6_GL000250v2_alt:1117759-1117891	7	-	1117759	1117759	16724991	1	132,	0,
#Deleted in new
chr6_GL000250v2_alt	1147034	1148001	chr6_GL000250v2_alt:1147034-1148001	7	-	1147034	1147034	16724991	1	967,	0,
#Deleted in new
chr6_GL000250v2_alt	1147347	1267669	chr6_GL000250v2_alt:1147347-1267669	3	+	1147490	1266858	789624	11	216,16,14,240,276,276,33,84,93,35,281,	0,340,39005,53186,53667,54522,68203,118979,119506,119955,120041,
#Deleted in new
chr6_GL000250v2_alt	1147490	1150213	chr6_GL000250v2_alt:1147490-1150213	7	+	1147490	1147490	16724991	7	73,270,276,275,117,33,44,	0,197,709,1570,1947,2504,2679,
#Deleted in new
chr6_GL000250v2_alt	1156286	1157418	chr6_GL000250v2_alt:1156286-1157418	7	+	1156286	1156286	16724991	4	272,102,37,39,	0,397,908,1093,
#Deleted in new
chr6_GL000250v2_alt	1166251	1166618	chr6_GL000250v2_alt:1166251-1166618	7	+	1166251	1166251	16724991	2	135,57,	0,310,
#Deleted in new
chr6_GL000250v2_alt	1167490	1168353	chr6_GL000250v2_alt:1167490-1168353	7	-	1167490	1167490	16724991	2	161,167,	0,696,
#Deleted in new
chr6_GL000250v2_alt	1185659	1186650	chr6_GL000250v2_alt:1185659-1186650	7	-	1185659	1185659	16724991	1	991,	0,
#Deleted in new
chr6_GL000250v2_alt	1186135	1188913	chr6_GL000250v2_alt:1186135-1188913	7	+	1186135	1186135	16724991	6	72,261,275,265,117,47,	0,201,719,1604,1998,2731,
#Deleted in new
chr6_GL000250v2_alt	1186137	1267078	chr6_GL000250v2_alt:1186137-1267078	1	+	1186137	1267078	789624	8	70,270,276,276,50,80,29,50,	0,14366,14877,15732,16110,80197,80720,80891,
#Deleted in new
chr6_GL000250v2_alt	1192023	1192209	chr6_GL000250v2_alt:1192023-1192209	7	+	1192023	1192023	16724991	1	186,	0,
#Deleted in new
chr6_GL000250v2_alt	1199009	1203632	chr6_GL000250v2_alt:1199009-1203632	1	+	1200300	1203203	0	10	60,128,223,270,276,276,117,33,48,434,	0,706,1141,1494,2005,2860,3238,3797,3972,4189,
#Deleted in new
chr6_GL000250v2_alt	1199821	1200814	chr6_GL000250v2_alt:1199821-1200814	7	-	1199821	1199821	16724991	1	993,	0,
#Deleted in new
chr6_GL000250v2_alt	1199991	1203632	chr6_GL000250v2_alt:1199991-1203632	1	+	1200300	1203203	789624	8	382,270,276,276,135,33,48,434,	0,512,1023,1878,2256,2815,2990,3207,
#Deleted in new
chr6_GL000250v2_alt	1200216	1203632	chr6_GL000250v2_alt:1200216-1203632	1	+	1200300	1203203	0	8	157,270,276,276,117,33,48,434,	0,287,798,1653,2031,2590,2765,2982,
#Deleted in new
chr6_GL000250v2_alt	1200294	1203632	chr6_GL000250v2_alt:1200294-1203632	0	+	1200294	1200294	8553170	7	79,98,259,276,592,48,434,	0,209,737,1575,1953,2687,2904,
#Deleted in new
chr6_GL000250v2_alt	1200295	1203632	chr6_GL000250v2_alt:1200295-1203632	1	+	1200300	1203203	789624	5	78,270,276,276,434,	0,208,719,1574,2903,
#Deleted in new
chr6_GL000250v2_alt	1200298	1203632	chr6_GL000250v2_alt:1200298-1203632	0	+	1200298	1200298	8553170	7	75,787,276,117,29,48,434,	0,205,1571,1949,2512,2683,2900,
#Deleted in new
chr6_GL000250v2_alt	1200300	1203029	chr6_GL000250v2_alt:1200300-1203029	0	+	1200300	1200300	8553170	6	73,787,276,135,33,48,	0,203,1569,1947,2506,2681,
#Deleted in new
chr6_GL000250v2_alt	1200300	1203029	chr6_GL000250v2_alt:1200300-1203029	0	+	1200300	1200300	8553170	6	73,787,276,117,33,48,	0,203,1569,1947,2506,2681,
#Deleted in new
chr6_GL000250v2_alt	1200300	1207358	chr6_GL000250v2_alt:1200300-1207358	1	+	1200300	1203121	789624	7	73,270,276,276,117,33,4377,	0,203,714,1569,1947,2506,2681,
#Deleted in new
chr6_GL000250v2_alt	1214308	1216283	chr6_GL000250v2_alt:1214308-1216283	7	+	1214308	1214308	16724991	5	261,274,153,37,46,	0,843,1244,1743,1929,
#Deleted in new
chr6_GL000250v2_alt	1250920	1251317	chr6_GL000250v2_alt:1250920-1251317	7	+	1250920	1250920	16724991	2	123,135,	0,262,
#Deleted in new
chr6_GL000250v2_alt	1252148	1253026	chr6_GL000250v2_alt:1252148-1253026	7	-	1252148	1252148	16724991	2	165,170,	0,708,
#Deleted in new
chr6_GL000250v2_alt	1258722	1319242	chr6_GL000250v2_alt:1258722-1319242	0	-	1258722	1258722	8553170	12	1722,202,174,119,43,279,106,95,203,68,76,183,	0,2157,6209,6510,7618,7879,8712,20671,34245,35253,57490,60337,
#Deleted in new
chr6_GL000250v2_alt	1258722	1319282	chr6_GL000250v2_alt:1258722-1319282	0	-	1258722	1258722	789624	6	1722,203,68,76,255,106,	0,34245,35253,57490,60116,60454,
#Deleted in new
chr6_GL000250v2_alt	1258722	1319241	chr6_GL000250v2_alt:1258722-1319241	0	-	1258722	1258722	8553170	4	1722,95,76,403,	0,20671,57490,60116,
#Deleted in new
chr6_GL000250v2_alt	1258722	1319026	chr6_GL000250v2_alt:1258722-1319026	0	-	1258722	1258722	8553170	3	1722,76,188,	0,57490,60116,
#Deleted in new
chr6_GL000250v2_alt	1263829	1264825	chr6_GL000250v2_alt:1263829-1264825	7	-	1263829	1263829	16724991	1	996,	0,
#Deleted in new
chr6_GL000250v2_alt	1264291	1267665	chr6_GL000250v2_alt:1264291-1267665	7	+	1264291	1264291	16724991	6	87,270,274,140,48,422,	0,217,1606,2455,2737,2952,
#Deleted in new
chr6_GL000250v2_alt	1264295	1267665	chr6_GL000250v2_alt:1264295-1267665	5	+	1264295	1264295	16724991	6	83,270,274,117,140,422,	0,213,1602,1998,2451,2948,
#Deleted in new
chr6_GL000250v2_alt	1264304	1267665	chr6_GL000250v2_alt:1264304-1267665	5	+	1264304	1264304	16724991	5	74,274,140,48,422,	0,1593,2442,2724,2939,
#Deleted in new
chr6_GL000250v2_alt	1264314	1267248	chr6_GL000250v2_alt:1264314-1267248	5	+	1264314	1264314	16724991	8	64,270,276,274,117,33,48,5,	0,194,712,1583,1979,2539,2714,2929,
#Deleted in new
chr6_GL000250v2_alt	1268537	1269982	chr6_GL000250v2_alt:1268537-1269982	0	-	1268537	1268537	8553170	1	1445,	0,
#Deleted in new
chr6_GL000250v2_alt	1269807	1293075	chr6_GL000250v2_alt:1269807-1293075	3	-	1269807	1269807	8553170	2	9681,108,	0,23160,
#Deleted in new
chr6_GL000250v2_alt	1277496	1319738	chr6_GL000250v2_alt:1277496-1319738	0	-	1277496	1277496	8553170	6	155,95,203,68,76,900,	0,1897,15471,16479,38716,41342,
#Deleted in new
chr6_GL000250v2_alt	1289772	1291063	chr6_GL000250v2_alt:1289772-1291063	7	+	1289772	1289772	16724991	2	436,548,	0,743,
#Deleted in new
chr6_GL000250v2_alt	1292994	1316845	chr6_GL000250v2_alt:1292994-1316845	0	-	1292994	1292994	8553170	4	176,68,76,380,	0,981,23218,23471,
#Deleted in new
chr6_GL000250v2_alt	1293489	1319287	chr6_GL000250v2_alt:1293489-1319287	0	-	1293489	1293489	8553170	4	554,627,76,449,	0,21699,22723,25349,
#Deleted in new
chr6_GL000250v2_alt	1293975	1294043	chr6_GL000250v2_alt:1293975-1294043	3	+	1293975	1293975	8553170	1	68,	0,
#Deleted in new
chr6_GL000250v2_alt	1312698	1319277	chr6_GL000250v2_alt:1312698-1319277	0	-	1312698	1312698	8553170	3	3117,76,101,	0,3514,6478,
#Deleted in new
chr6_GL000250v2_alt	1314850	1319077	chr6_GL000250v2_alt:1314850-1319077	0	-	1314850	1314850	8553170	3	965,76,2612,	0,1362,1615,
#Deleted in new
chr6_GL000250v2_alt	1316212	1316288	chr6_GL000250v2_alt:1316212-1316288	3	+	1316212	1316212	8553170	1	76,	0,
#Deleted in new
chr6_GL000250v2_alt	1316996	1323001	chr6_GL000250v2_alt:1316996-1323001	2	+	1316996	1316996	8553170	2	3435,237,	0,5768,
#Deleted in new
chr6_GL000250v2_alt	1319177	1319281	chr6_GL000250v2_alt:1319177-1319281	3	+	1319177	1319177	8553170	1	104,	0,
#Deleted in new
chr6_GL000250v2_alt	1319351	1323001	chr6_GL000250v2_alt:1319351-1323001	1	+	1319622	1322789	789624	4	416,101,110,237,	0,663,970,3413,
#Deleted in new
chr6_GL000250v2_alt	1319354	1323001	chr6_GL000250v2_alt:1319354-1323001	1	+	1319622	1322789	789624	5	133,155,101,110,237,	0,258,660,967,3410,
#Deleted in new
chr6_GL000250v2_alt	1319356	1323001	chr6_GL000250v2_alt:1319356-1323001	1	+	1319622	1322789	789624	5	140,155,101,110,237,	0,256,658,965,3408,
#Deleted in new
chr6_GL000250v2_alt	1319360	1323001	chr6_GL000250v2_alt:1319360-1323001	1	+	1319622	1322789	789624	5	151,155,101,110,237,	0,252,654,961,3404,
#Deleted in new
chr6_GL000250v2_alt	1319427	1323001	chr6_GL000250v2_alt:1319427-1323001	0	+	1319427	1319427	789624	4	69,155,110,237,	0,185,894,3337,
#Deleted in new
chr6_GL000250v2_alt	1324800	1328425	chr6_GL000250v2_alt:1324800-1328425	3	+	1326768	1327398	789624	3	301,109,1230,	0,1881,2395,
#Deleted in new
chr6_GL000250v2_alt	1325179	1328425	chr6_GL000250v2_alt:1325179-1328425	1	+	1325502	1327398	789624	3	392,109,1230,	0,1502,2016,
#Deleted in new
chr6_GL000250v2_alt	1325296	1328425	chr6_GL000250v2_alt:1325296-1328425	1	+	1326768	1327398	789624	4	275,75,109,1230,	0,1074,1385,1899,
#Deleted in new
chr6_GL000250v2_alt	1325634	1328425	chr6_GL000250v2_alt:1325634-1328425	1	+	1326768	1327398	789624	4	122,75,109,1230,	0,736,1047,1561,
#Deleted in new
chr6_GL000250v2_alt	1325667	1328425	chr6_GL000250v2_alt:1325667-1328425	1	+	1326768	1327398	789624	4	50,75,109,1230,	0,703,1014,1528,
#Deleted in new
chr6_GL000250v2_alt	1326297	1328425	chr6_GL000250v2_alt:1326297-1328425	1	+	1326768	1327398	789624	2	493,1230,	0,898,
#Deleted in new
chr6_GL000250v2_alt	1328357	1333941	chr6_GL000250v2_alt:1328357-1333941	1	-	1329202	1333881	789624	5	935,293,92,23,627,	0,1133,2891,3190,4957,
#Deleted in new
chr6_GL000250v2_alt	1328357	1333979	chr6_GL000250v2_alt:1328357-1333979	3	-	1329202	1333881	789624	4	1426,92,23,665,	0,2891,3190,4957,
#Deleted in new
chr6_GL000250v2_alt	1368538	1371196	chr6_GL000250v2_alt:1368538-1371196	3	-	1368538	1370895	789624	4	231,96,500,43,	0,1199,1940,2615,
#Deleted in new
chr6_GL000250v2_alt	1368538	1370276	chr6_GL000250v2_alt:1368538-1370276	0	-	1368538	1368538	8553170	3	231,96,107,	0,1199,1631,
#Deleted in new
chr6_GL000250v2_alt	1368538	1369796	chr6_GL000250v2_alt:1368538-1369796	0	-	1368538	1368538	8553170	2	231,59,	0,1199,
#Deleted in new
chr6_GL000250v2_alt	1368538	1368612	chr6_GL000250v2_alt:1368538-1368612	0	-	1368538	1368538	8553170	1	74,	0,
#Deleted in new
chr6_GL000250v2_alt	1368538	1370980	chr6_GL000250v2_alt:1368538-1370980	0	-	1368538	1368538	8553170	3	231,96,502,	0,1199,1940,
#Deleted in new
chr6_GL000250v2_alt	1369307	1370565	chr6_GL000250v2_alt:1369307-1370565	0	-	1369307	1369307	8553170	2	526,87,	0,1171,
#Deleted in new
chr6_GL000250v2_alt	1369807	1372814	chr6_GL000250v2_alt:1369807-1372814	3	+	1369807	1369807	789624	2	122,154,	0,2853,
#Deleted in new
chr6_GL000250v2_alt	1390897	1391059	chr6_GL000250v2_alt:1390897-1391059	3	-	1390897	1390897	8553170	1	162,	0,
#Deleted in new
chr6_GL000250v2_alt	1394223	1406831	chr6_GL000250v2_alt:1394223-1406831	3	+	1395132	1405908	789624	6	62,649,96,225,23,1011,	0,605,9866,10857,11392,11597,
#Deleted in new
chr6_GL000250v2_alt	1394223	1395294	chr6_GL000250v2_alt:1394223-1395294	0	+	1394223	1394223	8553170	2	471,466,	0,605,
#Deleted in new
chr6_GL000250v2_alt	1394826	1406831	chr6_GL000250v2_alt:1394826-1406831	1	+	1395132	1405908	789624	5	651,96,225,23,1011,	0,9263,10254,10789,10994,
#Deleted in new
chr6_GL000250v2_alt	1395105	1406831	chr6_GL000250v2_alt:1395105-1406831	1	+	1395132	1405908	789624	5	372,96,138,23,1011,	0,8984,10062,10510,10715,
#Deleted in new
chr6_GL000250v2_alt	1410040	1419029	chr6_GL000250v2_alt:1410040-1419029	1	-	1411783	1418953	789624	8	1827,176,33,116,23,231,96,505,	0,2366,3782,4994,5424,6453,7204,8484,
#Deleted in new
chr6_GL000250v2_alt	1410040	1419029	chr6_GL000250v2_alt:1410040-1419029	3	-	1412064	1418953	789624	7	2542,33,116,23,231,96,505,	0,3782,4994,5424,6453,7204,8484,
#Deleted in new
chr6_GL000250v2_alt	1421285	1430769	chr6_GL000250v2_alt:1421285-1430769	3	+	1421971	1430429	789624	8	860,96,231,9,14,116,33,858,	0,3970,5094,6035,6633,7295,7770,8626,
#Deleted in new
chr6_GL000250v2_alt	1421295	1430776	chr6_GL000250v2_alt:1421295-1430776	1	+	1421764	1430429	789624	7	850,96,231,23,116,33,865,	0,3960,5084,6025,7285,7760,8616,
#Deleted in new
chr6_GL000250v2_alt	1426392	1430035	chr6_GL000250v2_alt:1426392-1430035	0	+	1426392	1430035	789624	5	218,23,116,33,101,	0,928,2188,2663,3542,
#Deleted in new
chr6_GL000250v2_alt	1426436	1430776	chr6_GL000250v2_alt:1426436-1430776	0	+	1426436	1426436	8553170	6	174,23,116,33,65,124,	0,884,2144,2619,3475,4216,
#Deleted in new
chr6_GL000250v2_alt	1428392	1429177	chr6_GL000250v2_alt:1428392-1429177	0	+	1428392	1428392	8553170	2	304,122,	0,663,
#Deleted in new
chr6_GL000250v2_alt	1442505	1471482	chr6_GL000250v2_alt:1442505-1471482	3	-	1443926	1457164	789624	9	2104,33,116,23,231,96,488,104,123,	0,4719,4970,5565,12071,13984,14221,16590,28854,
#Deleted in new
chr6_GL000250v2_alt	1442505	1471421	chr6_GL000250v2_alt:1442505-1471421	1	-	1443926	1457164	789624	10	2104,33,116,23,231,96,599,104,110,62,	0,4719,4970,5565,12071,13984,14221,16590,20211,28854,
#Deleted in new
chr6_GL000250v2_alt	1442505	1462826	chr6_GL000250v2_alt:1442505-1462826	1	-	1443926	1457164	789624	9	2104,33,116,23,231,96,488,49,110,	0,4719,4970,5565,12071,13984,14221,16590,20211,
#Deleted in new
chr6_GL000250v2_alt	1442505	1448452	chr6_GL000250v2_alt:1442505-1448452	0	-	1442505	1442505	8553170	3	2104,33,977,	0,4719,4970,
#Deleted in new
chr6_GL000250v2_alt	1444848	1446672	chr6_GL000250v2_alt:1444848-1446672	7	-	1444848	1444848	16724991	2	840,363,	0,1461,
#Deleted in new
chr6_GL000250v2_alt	1454596	1471474	chr6_GL000250v2_alt:1454596-1471474	0	-	1454596	1457164	789624	6	211,96,488,104,110,115,	0,1893,2130,4499,8120,16763,
#Deleted in new
chr6_GL000250v2_alt	1454639	1462782	chr6_GL000250v2_alt:1454639-1462782	0	-	1454639	1457164	789624	5	168,96,263,89,66,	0,1850,2312,4456,8077,
#Deleted in new
chr6_GL000250v2_alt	1456551	1471440	chr6_GL000250v2_alt:1456551-1471440	0	-	1456551	1457164	789624	3	34,488,81,	0,175,14808,
#Deleted in new
chr6_GL000250v2_alt	1456798	1471421	chr6_GL000250v2_alt:1456798-1471421	0	-	1456798	1457164	789624	3	410,110,62,	0,5918,14561,
#Deleted in new
chr6_GL000250v2_alt	1456824	1471420	chr6_GL000250v2_alt:1456824-1471420	0	-	1456824	1456824	8553170	4	227,104,110,61,	0,2271,5892,14535,
#Deleted in new
chr6_GL000250v2_alt	1492087	1500358	chr6_GL000250v2_alt:1492087-1500358	3	-	1492087	1492087	8553170	3	230,93,165,	0,319,8106,
#Deleted in new
chr6_GL000250v2_alt	1492087	1492526	chr6_GL000250v2_alt:1492087-1492526	0	-	1492087	1492087	8553170	2	230,120,	0,319,
#Deleted in new
chr6_GL000250v2_alt	1496349	1500326	chr6_GL000250v2_alt:1496349-1500326	7	+	1496349	1496349	16724991	3	405,96,252,	0,3373,3725,
#Deleted in new
chr6_GL000250v2_alt	1620297	1655877	chr6_GL000250v2_alt:1620297-1655877	2	-	1620297	1620297	8553170	4	1806,494,106,34,	0,3677,5338,35546,
#Deleted in new
chr6_GL000250v2_alt	1620509	1655866	chr6_GL000250v2_alt:1620509-1655866	0	-	1620509	1620509	8553170	3	3959,106,368,	0,5126,34989,
#Deleted in new
chr6_GL000250v2_alt	1620509	1625741	chr6_GL000250v2_alt:1620509-1625741	0	-	1620509	1620509	8553170	3	1594,494,106,	0,3465,5126,
#Deleted in new
chr6_GL000250v2_alt	1620509	1656640	chr6_GL000250v2_alt:1620509-1656640	1	-	1620509	1620509	789624	3	3959,106,797,	0,5126,35334,
#Deleted in new
chr6_GL000250v2_alt	1620509	1625741	chr6_GL000250v2_alt:1620509-1625741	0	-	1620509	1620509	8553170	2	3959,106,	0,5126,
#Deleted in new
chr6_GL000250v2_alt	1620509	1625741	chr6_GL000250v2_alt:1620509-1625741	0	-	1620509	1620509	8553170	2	3959,106,	0,5126,
#Deleted in new
chr6_GL000250v2_alt	1620509	1655837	chr6_GL000250v2_alt:1620509-1655837	0	-	1620509	1620509	8553170	3	3959,106,197,	0,5126,35131,
#Deleted in new
chr6_GL000250v2_alt	1620509	1655876	chr6_GL000250v2_alt:1620509-1655876	0	-	1620509	1620509	8553170	4	1594,494,106,236,	0,3465,5126,35131,
#Deleted in new
chr6_GL000250v2_alt	1655498	1655624	chr6_GL000250v2_alt:1655498-1655624	0	-	1655498	1655498	8553170	1	126,	0,
#Deleted in new
chr6_GL000250v2_alt	1655968	1659242	chr6_GL000250v2_alt:1655968-1659242	0	+	1658808	1659242	789624	3	409,153,441,	0,2411,2833,
#Deleted in new
chr6_GL000250v2_alt	1656324	1659030	chr6_GL000250v2_alt:1656324-1659030	2	+	1658808	1659030	789624	4	161,45,153,229,	0,817,2055,2477,
#Deleted in new
chr6_GL000250v2_alt	1656333	1673225	chr6_GL000250v2_alt:1656333-1673225	1	+	1658808	1671755	0	8	152,153,460,96,231,23,116,2018,	0,2046,2468,3938,8907,13070,13667,14874,
#Deleted in new
chr6_GL000250v2_alt	1656333	1673224	chr6_GL000250v2_alt:1656333-1673224	1	+	1658808	1671755	0	9	152,153,460,96,231,23,90,116,2017,	0,2046,2468,3938,8907,13070,13434,13667,14874,
#Deleted in new
chr6_GL000250v2_alt	1656394	1665473	chr6_GL000250v2_alt:1656394-1665473	0	+	1658808	1665473	789624	5	91,133,460,96,233,	0,2005,2407,3877,8846,
#Deleted in new
chr6_GL000250v2_alt	1656409	1673225	chr6_GL000250v2_alt:1656409-1673225	1	+	1658808	1671755	0	9	76,45,133,460,96,231,23,116,2018,	0,732,1990,2392,3862,8831,12994,13591,14798,
#Deleted in new
chr6_GL000250v2_alt	1656446	1658986	chr6_GL000250v2_alt:1656446-1658986	0	+	1658808	1658986	789624	4	39,50,153,185,	0,690,1933,2355,
#Deleted in new
chr6_GL000250v2_alt	1656748	1673225	chr6_GL000250v2_alt:1656748-1673225	1	+	1658808	1671755	0	8	438,153,460,96,231,23,116,2018,	0,1631,2053,3523,8492,12655,13252,14459,
#Deleted in new
chr6_GL000250v2_alt	1657012	1658953	chr6_GL000250v2_alt:1657012-1658953	0	+	1658808	1658953	789624	3	174,133,152,	0,1387,1789,
#Deleted in new
chr6_GL000250v2_alt	1658379	1673225	chr6_GL000250v2_alt:1658379-1673225	1	+	1658808	1671755	0	8	153,460,96,231,23,90,116,2018,	0,422,1892,6861,11024,11388,11621,12828,
#Deleted in new
chr6_GL000250v2_alt	1658801	1676354	chr6_GL000250v2_alt:1658801-1676354	3	+	1658808	1676306	789624	10	460,96,231,23,116,185,101,83,126,146,	0,1470,6439,10602,11199,12406,15992,16185,17126,17407,
#Deleted in new
chr6_GL000250v2_alt	1659019	1670966	chr6_GL000250v2_alt:1659019-1670966	0	+	1659019	1670941	789624	6	242,96,231,23,34,82,	0,1252,6221,10384,10981,11865,
#Deleted in new
chr6_GL000250v2_alt	1674626	1676353	chr6_GL000250v2_alt:1674626-1676353	1	+	1674667	1676306	789624	5	98,101,107,126,145,	0,167,336,1301,1582,
#Deleted in new
chr6_GL000250v2_alt	1674629	1675989	chr6_GL000250v2_alt:1674629-1675989	0	+	1674629	1674629	8553170	4	95,101,439,62,	0,164,357,1298,
#Deleted in new
chr6_GL000250v2_alt	1674637	1676353	chr6_GL000250v2_alt:1674637-1676353	0	+	1674637	1674637	8553170	3	87,1260,145,	0,156,1571,
#Deleted in new
chr6_GL000250v2_alt	1674646	1676353	chr6_GL000250v2_alt:1674646-1676353	0	+	1674646	1674646	8553170	4	78,101,126,145,	0,147,1281,1562,
#Deleted in new
chr6_GL000250v2_alt	1674648	1676380	chr6_GL000250v2_alt:1674648-1676380	0	+	1674648	1674648	8553170	4	76,83,126,172,	0,338,1279,1560,
#Deleted in new
chr6_GL000250v2_alt	1674650	1676353	chr6_GL000250v2_alt:1674650-1676353	0	+	1674650	1674650	8553170	4	74,276,126,145,	0,143,1277,1558,
#Deleted in new
chr6_GL000250v2_alt	1674654	1676353	chr6_GL000250v2_alt:1674654-1676353	1	+	1674667	1676306	789624	5	70,101,83,126,145,	0,139,332,1273,1554,
#Deleted in new
chr6_GL000250v2_alt	1674654	1676353	chr6_GL000250v2_alt:1674654-1676353	1	+	1674667	1676306	789624	4	240,83,126,145,	0,332,1273,1554,
#Deleted in new
chr6_GL000250v2_alt	1674664	1676353	chr6_GL000250v2_alt:1674664-1676353	1	+	1674667	1676269	789624	5	60,101,83,133,145,	0,129,322,1263,1544,
#Deleted in new
chr6_GL000250v2_alt	1680911	1681046	chr6_GL000250v2_alt:1680911-1681046	7	+	1680911	1680911	16724991	1	135,	0,
#Deleted in new
chr6_GL000250v2_alt	1688774	1689408	chr6_GL000250v2_alt:1688774-1689408	7	-	1688774	1688774	16724991	1	634,	0,
#Deleted in new
chr6_GL000250v2_alt	1692606	1693775	chr6_GL000250v2_alt:1692606-1693775	7	-	1692606	1692606	16724991	1	1169,	0,
#Deleted in new
chr6_GL000250v2_alt	1744210	1748815	chr6_GL000250v2_alt:1744210-1748815	7	+	1744210	1744210	16724991	5	251,286,271,131,116,	0,517,1404,1791,4489,
#Deleted in new
chr6_GL000250v2_alt	1845769	1848724	chr6_GL000250v2_alt:1845769-1848724	3	+	1845769	1845769	8553170	2	346,505,	0,2450,
#Deleted in new
chr6_GL000250v2_alt	1870880	1883062	chr6_GL000250v2_alt:1870880-1883062	3	-	1875575	1883062	789624	7	4937,141,163,179,195,96,208,	0,5319,5735,5975,11091,11708,11974,
#Deleted in new
chr6_GL000250v2_alt	1875988	1882051	chr6_GL000250v2_alt:1875988-1882051	0	-	1875988	1875988	8553170	4	352,163,179,80,	0,627,867,5983,
#Deleted in new
chr6_GL000250v2_alt	1876699	1877321	chr6_GL000250v2_alt:1876699-1877321	0	-	1876699	1876699	8553170	2	79,466,	0,156,
#Deleted in new
chr6_GL000250v2_alt	1881681	1882625	chr6_GL000250v2_alt:1881681-1882625	0	-	1881681	1881681	8553170	2	485,37,	0,907,
#Deleted in new
chr6_GL000250v2_alt	1882864	1883062	chr6_GL000250v2_alt:1882864-1883062	0	-	1882864	1883062	789624	1	198,	0,
#Deleted in new
chr6_GL000250v2_alt	1988977	2002543	chr6_GL000250v2_alt:1988977-2002543	3	-	1988977	2002347	789624	12	153,99,211,116,111,192,204,255,57,163,239,403,	0,264,560,3155,3439,5329,5599,6007,10938,11318,11564,13163,
#Deleted in new
chr6_GL000250v2_alt	1988977	1991489	chr6_GL000250v2_alt:1988977-1991489	0	-	1988977	1991362	789624	4	153,99,211,228,	0,264,560,2284,
#Deleted in new
chr6_GL000250v2_alt	1988978	1990083	chr6_GL000250v2_alt:1988978-1990083	0	-	1988978	1988978	8553170	3	152,99,546,	0,263,559,
#Deleted in new
chr6_GL000250v2_alt	1994635	2002494	chr6_GL000250v2_alt:1994635-2002494	0	-	1994635	2002488	789624	6	145,255,57,163,239,33,	0,349,5280,5660,5906,7826,
#Deleted in new
chr6_GL000250v2_alt	2005895	2017402	chr6_GL000250v2_alt:2005895-2017402	3	-	2006775	2015525	789624	3	900,211,3488,	0,2790,8019,
#Deleted in new
chr6_GL000250v2_alt	2005895	2016723	chr6_GL000250v2_alt:2005895-2016723	1	-	2006775	2015525	789624	4	900,211,1639,103,	0,2790,8019,10725,
#Deleted in new
chr6_GL000250v2_alt	2005895	2016665	chr6_GL000250v2_alt:2005895-2016665	0	-	2005895	2005895	8553170	3	900,211,45,	0,2790,10725,
#Deleted in new
chr6_GL000250v2_alt	2005895	2016700	chr6_GL000250v2_alt:2005895-2016700	0	-	2005895	2005895	8553170	4	900,211,137,80,	0,2790,8019,10725,
#Deleted in new
chr6_GL000250v2_alt	2017553	2020483	chr6_GL000250v2_alt:2017553-2020483	1	-	2018167	2020481	789624	3	896,197,135,	0,2000,2795,
#Deleted in new
chr6_GL000250v2_alt	2017553	2020927	chr6_GL000250v2_alt:2017553-2020927	3	-	2018167	2020481	789624	5	896,177,197,440,45,	0,1229,2000,2795,3329,
#Deleted in new
chr6_GL000250v2_alt	2017553	2020230	chr6_GL000250v2_alt:2017553-2020230	0	-	2018167	2020230	789624	4	896,177,197,131,	0,1229,2000,2546,
#Deleted in new
chr6_GL000250v2_alt	2017553	2020509	chr6_GL000250v2_alt:2017553-2020509	0	-	2017553	2017553	789624	4	896,177,219,161,	0,1229,1978,2795,
#Deleted in new
chr6_GL000250v2_alt	2017553	2020481	chr6_GL000250v2_alt:2017553-2020481	0	-	2017553	2017553	8553170	2	896,133,	0,2795,
#Deleted in new
chr6_GL000250v2_alt	2017553	2019860	chr6_GL000250v2_alt:2017553-2019860	0	-	2017553	2017553	8553170	2	896,307,	0,2000,
#Deleted in new
chr6_GL000250v2_alt	2017553	2020493	chr6_GL000250v2_alt:2017553-2020493	0	-	2017553	2017553	8553170	3	896,219,145,	0,1978,2795,
#Deleted in new
chr6_GL000250v2_alt	2017553	2020474	chr6_GL000250v2_alt:2017553-2020474	0	-	2017553	2017553	789624	3	896,177,126,	0,1229,2795,
#Deleted in new
chr6_GL000250v2_alt	2017556	2020815	chr6_GL000250v2_alt:2017556-2020815	1	-	2018167	2020481	789624	4	893,177,197,467,	0,1226,1997,2792,
#Deleted in new
chr6_GL000250v2_alt	2026310	2027040	chr6_GL000250v2_alt:2026310-2027040	7	-	2026310	2026310	16724991	1	730,	0,
#Deleted in new
chr6_GL000250v2_alt	2029311	2047393	chr6_GL000250v2_alt:2029311-2047393	3	-	2029969	2044679	0	15	826,111,126,183,120,2478,71,792,93,60,1481,70,381,139,645,	0,2746,2945,3297,3611,3814,7576,7758,11604,11859,12066,13840,13995,15232,17437,
#Deleted in new
chr6_GL000250v2_alt	2029819	2033586	chr6_GL000250v2_alt:2029819-2033586	0	-	2029819	2029819	8553170	5	318,111,126,183,664,	0,2238,2437,2789,3103,
#Deleted in new
chr6_GL000250v2_alt	2032571	2042688	chr6_GL000250v2_alt:2032571-2042688	3	+	2032571	2032571	789624	3	127,114,497,	0,9244,9620,
#Deleted in new
chr6_GL000250v2_alt	2034952	2041418	chr6_GL000250v2_alt:2034952-2041418	0	-	2034952	2041418	789624	5	651,71,93,60,41,	0,1935,5963,6218,6425,
#Deleted in new
chr6_GL000250v2_alt	2035086	2037189	chr6_GL000250v2_alt:2035086-2037189	0	-	2035086	2035086	8553170	2	517,302,	0,1801,
#Deleted in new
chr6_GL000250v2_alt	2040975	2041435	chr6_GL000250v2_alt:2040975-2041435	0	-	2040975	2040975	8553170	3	30,60,58,	0,195,402,
#Deleted in new
chr6_GL000250v2_alt	2042711	2046579	chr6_GL000250v2_alt:2042711-2046579	1	-	2043208	2044679	789624	7	147,70,20,107,153,139,194,	0,440,595,618,823,1832,3674,
#Deleted in new
chr6_GL000250v2_alt	2043336	2046679	chr6_GL000250v2_alt:2043336-2046679	0	-	2043336	2044679	789624	3	351,139,92,	0,1207,3251,
#Deleted in new
chr6_GL000250v2_alt	2043443	2046951	chr6_GL000250v2_alt:2043443-2046951	0	-	2043443	2044679	789624	3	244,139,199,	0,1100,3309,
#Deleted in new
chr6_GL000250v2_alt	2043483	2046625	chr6_GL000250v2_alt:2043483-2046625	0	-	2043483	2044679	789624	3	204,139,240,	0,1060,2902,
#Deleted in new
chr6_GL000250v2_alt	2049703	2054929	chr6_GL000250v2_alt:2049703-2054929	3	+	2050009	2053900	0	4	363,109,111,2087,	0,2336,2717,3139,
#Deleted in new
chr6_GL000250v2_alt	2051076	2054929	chr6_GL000250v2_alt:2051076-2054929	1	+	2052470	2053900	789624	4	325,109,111,2087,	0,963,1344,1766,
#Deleted in new
chr6_GL000250v2_alt	2051169	2054929	chr6_GL000250v2_alt:2051169-2054929	1	+	2051762	2053900	789624	4	596,109,111,2087,	0,870,1251,1673,
#Deleted in new
chr6_GL000250v2_alt	2051201	2054929	chr6_GL000250v2_alt:2051201-2054929	1	+	2052470	2053900	789624	4	516,109,111,2087,	0,838,1219,1641,
#Deleted in new
chr6_GL000250v2_alt	2057211	2060006	chr6_GL000250v2_alt:2057211-2060006	3	-	2057618	2060006	789624	3	437,165,76,	0,2313,2719,
#Deleted in new
chr6_GL000250v2_alt	2057211	2060006	chr6_GL000250v2_alt:2057211-2060006	0	-	2057211	2057211	8553170	3	437,165,76,	0,2313,2719,
#Deleted in new
chr6_GL000250v2_alt	2214728	2218933	chr6_GL000250v2_alt:2214728-2218933	0	+	2218232	2218933	789624	4	129,127,103,229,	0,3462,3682,3976,
#Deleted in new
chr6_GL000250v2_alt	2215127	2218933	chr6_GL000250v2_alt:2215127-2218933	0	+	2218232	2218933	789624	4	56,127,103,229,	0,3063,3283,3577,
#Deleted in new
chr6_GL000250v2_alt	2215127	2218933	chr6_GL000250v2_alt:2215127-2218933	0	+	2218232	2218933	789624	4	56,127,103,229,	0,3063,3283,3577,
#Deleted in new
chr6_GL000250v2_alt	2217891	2218933	chr6_GL000250v2_alt:2217891-2218933	3	+	2218232	2218933	789624	3	426,103,229,	0,519,813,
#Deleted in new
chr6_GL000250v2_alt	2218190	2218933	chr6_GL000250v2_alt:2218190-2218933	0	+	2218232	2218933	789624	3	127,103,229,	0,220,514,
#Deleted in new
chr6_GL000250v2_alt	2218190	2218933	chr6_GL000250v2_alt:2218190-2218933	0	+	2218232	2218933	789624	3	127,103,229,	0,220,514,
#Deleted in new
chr6_GL000250v2_alt	2218190	2218515	chr6_GL000250v2_alt:2218190-2218515	0	+	2218232	2218515	789624	2	127,105,	0,220,
#Deleted in new
chr6_GL000250v2_alt	2218190	2218933	chr6_GL000250v2_alt:2218190-2218933	0	+	2218232	2218933	789624	3	127,103,229,	0,220,514,
#Deleted in new
chr6_GL000250v2_alt	2218190	2218933	chr6_GL000250v2_alt:2218190-2218933	0	+	2218232	2218933	789624	3	127,103,229,	0,220,514,
#Deleted in new
chr6_GL000250v2_alt	2218190	2218933	chr6_GL000250v2_alt:2218190-2218933	0	+	2218232	2218933	789624	3	127,103,229,	0,220,514,
#Deleted in new
chr6_GL000250v2_alt	2218190	2218933	chr6_GL000250v2_alt:2218190-2218933	0	+	2218190	2218190	8553170	3	127,103,229,	0,220,514,
#Deleted in new
chr6_GL000250v2_alt	2218190	2218933	chr6_GL000250v2_alt:2218190-2218933	0	+	2218190	2218190	8553170	3	127,103,229,	0,220,514,
#Deleted in new
chr6_GL000250v2_alt	2313217	2319398	chr6_GL000250v2_alt:2313217-2319398	3	+	2313458	2317689	789624	3	302,1445,1904,	0,2514,4277,
#Deleted in new
chr6_GL000250v2_alt	2313217	2315884	chr6_GL000250v2_alt:2313217-2315884	0	+	2313217	2313217	8553170	2	444,153,	0,2514,
#Deleted in new
chr6_GL000250v2_alt	2359749	2364549	chr6_GL000250v2_alt:2359749-2364549	3	+	2359749	2359749	8553170	3	189,386,37,	0,2287,4763,
#Deleted in new
chr6_GL000250v2_alt	2386019	2392461	chr6_GL000250v2_alt:2386019-2392461	0	+	2386019	2386019	789624	4	82,417,693,483,	0,650,2769,5959,
#Deleted in new
chr6_GL000250v2_alt	2386641	2392447	chr6_GL000250v2_alt:2386641-2392447	0	+	2386641	2386641	8553170	4	445,293,396,469,	0,2147,2444,5337,
#Deleted in new
chr6_GL000250v2_alt	2386776	2392447	chr6_GL000250v2_alt:2386776-2392447	3	+	2386776	2386776	8553170	3	310,1202,469,	0,1503,5202,
#Deleted in new
chr6_GL000250v2_alt	2386899	2389361	chr6_GL000250v2_alt:2386899-2389361	0	+	2386899	2386899	8553170	2	187,573,	0,1889,
#Deleted in new
chr6_GL000250v2_alt	2827448	2843673	chr6_GL000250v2_alt:2827448-2843673	3	+	2838192	2842459	789624	6	115,255,288,279,132,1342,	0,10718,11244,12123,12501,14883,
#Deleted in new
chr6_GL000250v2_alt	2829256	2829358	chr6_GL000250v2_alt:2829256-2829358	3	-	2829256	2829256	8553170	1	102,	0,
#Deleted in new
chr6_GL000250v2_alt	2830653	2843674	chr6_GL000250v2_alt:2830653-2843674	1	+	2830761	2842459	789624	6	178,255,159,279,132,1343,	0,7513,8168,8918,9296,11678,
#Deleted in new
chr6_GL000250v2_alt	2830682	2843674	chr6_GL000250v2_alt:2830682-2843674	1	+	2830761	2842459	789624	6	149,255,288,279,132,1343,	0,7484,8010,8889,9267,11649,
#Deleted in new
chr6_GL000250v2_alt	2838484	2840081	chr6_GL000250v2_alt:2838484-2840081	0	+	2838484	2838484	8553170	3	496,279,132,	0,1087,1465,
#Deleted in new
chr6_GL000250v2_alt	2852029	2852841	chr6_GL000250v2_alt:2852029-2852841	7	-	2852029	2852029	16724991	2	171,327,	0,485,
#Deleted in new
chr6_GL000250v2_alt	2860662	2861242	chr6_GL000250v2_alt:2860662-2861242	7	+	2860662	2860662	16724991	1	580,	0,
#Deleted in new
chr6_GL000250v2_alt	2861265	2862781	chr6_GL000250v2_alt:2861265-2862781	3	+	2861563	2862484	789624	2	469,486,	0,1030,
#Deleted in new
chr6_GL000250v2_alt	2862767	2871733	chr6_GL000250v2_alt:2862767-2871733	0	-	2862982	2871733	789624	9	232,148,145,110,132,119,184,93,38,	0,560,834,1077,2561,5148,6281,8544,8928,
#Deleted in new
chr6_GL000250v2_alt	2862767	2871733	chr6_GL000250v2_alt:2862767-2871733	0	-	2862982	2871733	789624	9	232,148,145,110,132,119,184,93,38,	0,560,834,1077,2561,5148,6281,8544,8928,
#Deleted in new
chr6_GL000250v2_alt	2862767	2871733	chr6_GL000250v2_alt:2862767-2871733	1	-	2863342	2871733	789624	9	232,171,145,110,132,119,184,93,38,	0,560,834,1077,2561,5148,6281,8544,8928,
#Deleted in new
chr6_GL000250v2_alt	2862767	2871733	chr6_GL000250v2_alt:2862767-2871733	0	-	2862982	2871733	789624	9	232,148,145,110,132,119,184,93,38,	0,560,834,1077,2561,5148,6281,8544,8928,
#Deleted in new
chr6_GL000250v2_alt	2862767	2864293	chr6_GL000250v2_alt:2862767-2864293	0	-	2862767	2862767	8553170	4	232,148,145,449,	0,560,834,1077,
#Deleted in new
chr6_GL000250v2_alt	2862767	2871733	chr6_GL000250v2_alt:2862767-2871733	0	-	2862767	2862767	8553170	8	232,148,145,110,2706,184,93,38,	0,560,834,1077,2561,6281,8544,8928,
#Deleted in new
chr6_GL000250v2_alt	2862767	2868024	chr6_GL000250v2_alt:2862767-2868024	0	-	2863654	2868024	789624	6	232,148,126,110,132,109,	0,560,834,1077,2561,5148,
#Deleted in new
chr6_GL000250v2_alt	2862791	2863484	chr6_GL000250v2_alt:2862791-2863484	0	-	2862791	2862791	8553170	2	507,111,	0,582,
#Deleted in new
chr6_GL000250v2_alt	2863327	2867060	chr6_GL000250v2_alt:2863327-2867060	0	-	2863327	2867060	789624	5	148,145,110,132,26,	0,274,517,2001,3707,
#Deleted in new
chr6_GL000250v2_alt	2863664	2864220	chr6_GL000250v2_alt:2863664-2864220	0	-	2863664	2863664	8553170	2	63,376,	0,180,
#Deleted in new
chr6_GL000250v2_alt	2863822	2869232	chr6_GL000250v2_alt:2863822-2869232	2	-	2863822	2863822	8553170	4	132,132,119,184,	0,1506,4093,5226,
#Deleted in new
chr6_GL000250v2_alt	2863850	2869232	chr6_GL000250v2_alt:2863850-2869232	0	-	2863850	2869232	789624	4	104,132,119,184,	0,1478,4065,5198,
#Deleted in new
chr6_GL000250v2_alt	2864961	2871733	chr6_GL000250v2_alt:2864961-2871733	0	-	2864961	2864961	8553170	4	3073,184,93,38,	0,4087,6350,6734,
#Deleted in new
chr6_GL000250v2_alt	2865328	2871733	chr6_GL000250v2_alt:2865328-2871733	0	-	2865328	2871733	789624	5	132,119,184,93,38,	0,2587,3720,5983,6367,
#Deleted in new
chr6_GL000250v2_alt	2867936	2871733	chr6_GL000250v2_alt:2867936-2871733	0	-	2867936	2871733	789624	4	98,184,93,38,	0,1112,3375,3759,
#Deleted in new
chr6_GL000250v2_alt	2867943	2871733	chr6_GL000250v2_alt:2867943-2871733	0	-	2867943	2871733	789624	4	91,184,93,38,	0,1105,3368,3752,
#Deleted in new
chr6_GL000250v2_alt	2867955	2871733	chr6_GL000250v2_alt:2867955-2871733	0	-	2867955	2871733	789624	4	79,184,93,38,	0,1093,3356,3740,
#Deleted in new
chr6_GL000250v2_alt	2868922	2868998	chr6_GL000250v2_alt:2868922-2868998	3	-	2868922	2868922	789624	1	76,	0,
#Deleted in new
chr6_GL000250v2_alt	2869157	2871733	chr6_GL000250v2_alt:2869157-2871733	0	-	2869157	2871733	789624	3	75,177,38,	0,2154,2538,
#Deleted in new
chr6_GL000250v2_alt	2869171	2871733	chr6_GL000250v2_alt:2869171-2871733	0	-	2869171	2871733	789624	3	61,93,38,	0,2140,2524,
#Deleted in new
chr6_GL000250v2_alt	2871367	2871733	chr6_GL000250v2_alt:2871367-2871733	0	-	2871367	2871733	789624	2	37,38,	0,328,
#Deleted in new
chr6_GL000250v2_alt	2871379	2871733	chr6_GL000250v2_alt:2871379-2871733	0	-	2871379	2871733	789624	2	25,38,	0,316,
#Deleted in new
chr6_GL000250v2_alt	2871430	2871733	chr6_GL000250v2_alt:2871430-2871733	0	-	2871430	2871733	789624	2	58,38,	0,265,
#Deleted in new
chr6_GL000250v2_alt	2909112	2910915	chr6_GL000250v2_alt:2909112-2910915	3	+	2909112	2910116	789624	3	46,48,1221,	0,233,582,
#Deleted in new
chr6_GL000250v2_alt	2913133	2915004	chr6_GL000250v2_alt:2913133-2915004	3	-	2913287	2914996	0	4	609,72,46,170,	0,1004,1259,1701,
#Deleted in new
chr6_GL000250v2_alt	2913133	2915006	chr6_GL000250v2_alt:2913133-2915006	0	-	2913133	2913133	8553170	3	609,72,172,	0,1004,1701,
#Deleted in new
chr6_GL000250v2_alt	2913133	2915101	chr6_GL000250v2_alt:2913133-2915101	0	-	2913133	2913133	8553170	3	609,72,27,	0,1004,1941,
#Deleted in new
chr6_GL000250v2_alt	2918702	2921488	chr6_GL000250v2_alt:2918702-2921488	3	+	2919878	2921255	789624	4	192,119,23,392,	0,1076,1820,2394,
#Deleted in new
chr6_GL000250v2_alt	2918757	2921488	chr6_GL000250v2_alt:2918757-2921488	1	+	2919878	2921255	789624	5	137,119,93,23,392,	0,1021,1462,1765,2339,
#Deleted in new
chr6_GL000250v2_alt	2918772	2921488	chr6_GL000250v2_alt:2918772-2921488	0	+	2918772	2918772	8553170	2	122,1710,	0,1006,
#Deleted in new
chr6_GL000250v2_alt	2918795	2921488	chr6_GL000250v2_alt:2918795-2921488	1	+	2919878	2921164	789624	3	99,119,392,	0,983,2301,
#Deleted in new
chr6_GL000250v2_alt	2918795	2921488	chr6_GL000250v2_alt:2918795-2921488	1	+	2919878	2921164	789624	3	99,119,347,	0,983,2346,
#Deleted in new
chr6_GL000250v2_alt	2918798	2921488	chr6_GL000250v2_alt:2918798-2921488	1	+	2919878	2921255	789624	4	96,119,23,347,	0,980,1724,2343,
#Deleted in new
chr6_GL000250v2_alt	2918813	2921488	chr6_GL000250v2_alt:2918813-2921488	0	+	2918813	2918813	8553170	3	81,123,1359,	0,965,1316,
#Deleted in new
chr6_GL000250v2_alt	2919277	2921488	chr6_GL000250v2_alt:2919277-2921488	1	+	2919878	2921164	789624	4	109,119,93,413,	0,501,942,1798,
#Deleted in new
chr6_GL000250v2_alt	2919426	2921488	chr6_GL000250v2_alt:2919426-2921488	1	+	2919878	2921164	789624	3	92,119,392,	0,352,1670,
#Deleted in new
chr6_GL000250v2_alt	2919473	2920309	chr6_GL000250v2_alt:2919473-2920309	0	+	2919878	2920309	789624	3	45,119,90,	0,305,746,
#Deleted in new
chr6_GL000250v2_alt	2919587	2921488	chr6_GL000250v2_alt:2919587-2921488	1	+	2919878	2921164	789624	3	108,119,392,	0,191,1509,
#Deleted in new
chr6_GL000250v2_alt	2919600	2921488	chr6_GL000250v2_alt:2919600-2921488	1	+	2919878	2921164	789624	2	297,392,	0,1496,
#Deleted in new
chr6_GL000250v2_alt	2919610	2921488	chr6_GL000250v2_alt:2919610-2921488	1	+	2919878	2921255	789624	5	85,119,93,23,392,	0,168,609,912,1486,
#Deleted in new
chr6_GL000250v2_alt	2919644	2921488	chr6_GL000250v2_alt:2919644-2921488	1	+	2919878	2921255	789624	3	253,23,392,	0,878,1452,
#Deleted in new
chr6_GL000250v2_alt	2919658	2921488	chr6_GL000250v2_alt:2919658-2921488	1	+	2919878	2921255	789624	4	37,119,23,392,	0,120,864,1438,
#Deleted in new
chr6_GL000250v2_alt	2919664	2920420	chr6_GL000250v2_alt:2919664-2920420	0	+	2919878	2920420	789624	4	21,119,93,26,	0,114,555,730,
#Deleted in new
chr6_GL000250v2_alt	2919675	2921488	chr6_GL000250v2_alt:2919675-2921488	1	+	2919878	2921164	789624	4	20,119,93,392,	0,103,544,1421,
#Deleted in new
chr6_GL000250v2_alt	2919695	2921488	chr6_GL000250v2_alt:2919695-2921488	1	+	2919878	2921255	789624	4	202,93,23,347,	0,524,827,1446,
#Deleted in new
chr6_GL000250v2_alt	2919778	2921488	chr6_GL000250v2_alt:2919778-2921488	1	+	2919878	2921164	789624	2	119,413,	0,1297,
#Deleted in new
chr6_GL000250v2_alt	2919778	2921488	chr6_GL000250v2_alt:2919778-2921488	1	+	2919878	2921255	789624	4	119,93,23,413,	0,441,744,1297,
#Deleted in new
chr6_GL000250v2_alt	2919778	2921488	chr6_GL000250v2_alt:2919778-2921488	1	+	2919878	2921255	789624	3	119,23,413,	0,744,1297,
#Deleted in new
chr6_GL000250v2_alt	2919833	2921488	chr6_GL000250v2_alt:2919833-2921488	0	+	2919833	2919833	8553170	3	64,151,392,	0,561,1263,
#Deleted in new
chr6_GL000250v2_alt	2919882	2921488	chr6_GL000250v2_alt:2919882-2921488	0	+	2919882	2921164	789624	3	15,93,347,	0,337,1259,
#Deleted in new
chr6_GL000250v2_alt	2921473	2925564	chr6_GL000250v2_alt:2921473-2925564	1	-	2921645	2925300	0	4	282,108,345,307,	0,631,887,3784,
#Deleted in new
chr6_GL000250v2_alt	2921473	2925564	chr6_GL000250v2_alt:2921473-2925564	3	-	2921772	2925300	0	4	337,108,345,307,	0,631,887,3784,
#Deleted in new
chr6_GL000250v2_alt	2921473	2925391	chr6_GL000250v2_alt:2921473-2925391	0	-	2921473	2921473	8553170	4	337,108,118,22,	0,631,887,3896,
#Deleted in new
chr6_GL000250v2_alt	2921473	2925538	chr6_GL000250v2_alt:2921473-2925538	0	-	2921473	2921473	8553170	4	337,108,345,103,	0,631,887,3962,
#Deleted in new
chr6_GL000250v2_alt	2921852	2925564	chr6_GL000250v2_alt:2921852-2925564	1	-	2921890	2925300	0	4	115,108,345,307,	0,252,508,3405,
#Deleted in new
chr6_GL000250v2_alt	2921875	2925328	chr6_GL000250v2_alt:2921875-2925328	1	-	2921890	2925300	0	5	92,108,118,152,71,	0,229,485,678,3382,
#Deleted in new
chr6_GL000250v2_alt	2921875	2925328	chr6_GL000250v2_alt:2921875-2925328	0	-	2922197	2925300	789624	4	92,108,290,71,	0,229,540,3382,
#Deleted in new
chr6_GL000250v2_alt	2943691	2943965	chr6_GL000250v2_alt:2943691-2943965	7	-	2943691	2943691	16724991	1	274,	0,
#Deleted in new
chr6_GL000250v2_alt	3089203	3095288	chr6_GL000250v2_alt:3089203-3095288	1	+	3090740	3095143	789624	14	325,872,73,110,81,88,190,127,150,75,144,138,74,257,	0,830,1956,2174,2505,2833,3194,3498,4098,4596,4880,5226,5520,5828,
#Deleted in new
chr6_GL000250v2_alt	3089562	3089665	chr6_GL000250v2_alt:3089562-3089665	3	-	3089562	3089562	8553170	1	103,	0,
#Deleted in new
chr6_GL000250v2_alt	3090776	3095288	chr6_GL000250v2_alt:3090776-3095288	0	+	3090776	3095143	789624	13	129,73,110,81,88,190,127,150,75,144,138,74,257,	0,383,601,932,1260,1621,1925,2525,3023,3307,3653,3947,4255,
#Deleted in new
chr6_GL000250v2_alt	3090776	3095288	chr6_GL000250v2_alt:3090776-3095288	0	+	3090776	3095143	789624	13	129,73,110,81,88,190,127,150,78,144,138,74,257,	0,383,601,932,1260,1621,1925,2525,3020,3307,3653,3947,4255,
#Deleted in new
chr6_GL000250v2_alt	3090776	3095288	chr6_GL000250v2_alt:3090776-3095288	0	+	3090776	3095143	789624	13	129,73,110,81,88,190,127,150,75,144,138,74,257,	0,383,601,932,1260,1621,1925,2525,3023,3307,3653,3947,4255,
#Deleted in new
chr6_GL000250v2_alt	3090776	3092103	chr6_GL000250v2_alt:3090776-3092103	0	+	3090776	3092103	789624	5	129,88,110,81,67,	0,368,601,932,1260,
#Deleted in new
chr6_GL000250v2_alt	3090776	3095288	chr6_GL000250v2_alt:3090776-3095288	0	+	3090776	3095143	789624	13	129,73,110,81,88,190,127,150,75,144,48,74,257,	0,383,601,932,1260,1621,1925,2525,3023,3307,3653,3947,4255,
#Deleted in new
chr6_GL000250v2_alt	3090776	3097463	chr6_GL000250v2_alt:3090776-3097463	3	+	3090776	3095143	789624	17	129,73,110,81,88,190,127,150,75,144,138,74,749,141,96,90,416,	0,383,601,932,1260,1621,1925,2525,3023,3307,3653,3947,4255,5250,5899,6101,6271,
#Deleted in new
chr6_GL000250v2_alt	3090776	3091746	chr6_GL000250v2_alt:3090776-3091746	0	+	3090776	3090776	8553170	3	129,110,38,	0,601,932,
#Deleted in new
chr6_GL000250v2_alt	3090776	3091220	chr6_GL000250v2_alt:3090776-3091220	0	+	3090776	3090776	8553170	2	129,61,	0,383,
#Deleted in new
chr6_GL000250v2_alt	3090806	3092114	chr6_GL000250v2_alt:3090806-3092114	0	+	3090806	3090806	8553170	4	99,73,110,406,	0,353,571,902,
#Deleted in new
chr6_GL000250v2_alt	3092056	3097463	chr6_GL000250v2_alt:3092056-3097463	0	+	3092056	3094400	789624	14	68,190,127,150,75,144,116,74,151,379,141,96,90,416,	0,341,645,1245,1743,2027,2305,2667,2975,3345,3970,4619,4821,4991,
#Deleted in new
chr6_GL000250v2_alt	3092528	3095288	chr6_GL000250v2_alt:3092528-3095288	2	+	3092528	3094542	789624	8	59,127,75,144,31,90,74,257,	0,173,1271,1555,1833,1949,2195,2503,
#Deleted in new
chr6_GL000250v2_alt	3093331	3095756	chr6_GL000250v2_alt:3093331-3095756	0	+	3093331	3093331	8553170	7	120,75,144,48,74,151,94,	0,468,752,1098,1392,1700,2331,
#Deleted in new
chr6_GL000250v2_alt	3093823	3095288	chr6_GL000250v2_alt:3093823-3095288	0	+	3093823	3095143	789624	5	51,144,90,74,257,	0,260,654,900,1208,
#Deleted in new
chr6_GL000250v2_alt	3094534	3095288	chr6_GL000250v2_alt:3094534-3095288	0	+	3094534	3094534	8553170	2	263,257,	0,497,
#Deleted in new
chr6_GL000250v2_alt	3095055	3097463	chr6_GL000250v2_alt:3095055-3097463	0	+	3095055	3095143	789624	4	127,141,96,586,	0,971,1620,1822,
#Deleted in new
chr6_GL000250v2_alt	3095410	3097463	chr6_GL000250v2_alt:3095410-3097463	3	+	3095666	3097143	789624	4	370,141,96,413,	0,616,1265,1640,
#Deleted in new
chr6_GL000250v2_alt	3095607	3097463	chr6_GL000250v2_alt:3095607-3097463	1	+	3095666	3097143	789624	5	173,141,96,90,416,	0,419,1068,1270,1440,
#Deleted in new
chr6_GL000250v2_alt	3096231	3096911	chr6_GL000250v2_alt:3096231-3096911	0	+	3096231	3096231	8553170	2	540,34,	0,646,
#Deleted in new
chr6_GL000250v2_alt	3096921	3098200	chr6_GL000250v2_alt:3096921-3098200	3	-	3096921	3096921	789624	2	411,50,	0,1229,
#Deleted in new
chr6_GL000250v2_alt	3098201	3109905	chr6_GL000250v2_alt:3098201-3109905	3	-	3098205	3109390	789624	17	181,175,140,302,93,153,133,186,117,113,170,196,111,97,279,249,186,	0,293,655,873,1568,1772,2032,3427,4084,4410,7363,7651,8925,9742,10373,10955,11518,
#Deleted in new
chr6_GL000250v2_alt	3098648	3100299	chr6_GL000250v2_alt:3098648-3100299	0	-	3098648	3098648	8553170	5	21,520,93,153,66,	0,208,1121,1325,1585,
#Deleted in new
chr6_GL000250v2_alt	3098900	3109883	chr6_GL000250v2_alt:3098900-3109883	0	-	3098900	3098900	8553170	15	96,302,93,153,133,186,117,113,170,80,111,97,79,249,164,	0,174,869,1073,1333,2728,3385,3711,6664,6952,8226,9043,9874,10256,10819,
#Deleted in new
chr6_GL000250v2_alt	3103881	3105618	chr6_GL000250v2_alt:3103881-3105618	0	-	3103881	3103881	8553170	2	554,54,	0,1683,
#Deleted in new
chr6_GL000250v2_alt	3108669	3109530	chr6_GL000250v2_alt:3108669-3109530	0	-	3108669	3108669	8553170	2	184,374,	0,487,
#Deleted in new
chr6_GL000250v2_alt	3110128	3128564	chr6_GL000250v2_alt:3110128-3128564	3	-	3110204	3127828	789624	30	145,326,112,207,156,128,79,69,105,126,71,106,91,159,104,125,91,95,109,120,82,165,128,101,85,125,139,135,420,408,	0,1449,1907,2090,2480,2923,3187,3352,3501,3963,4173,4329,4569,4767,5012,5203,5578,6697,6877,7078,7729,8052,14092,14353,14699,14874,15239,15468,17313,18028,
#Deleted in new
chr6_GL000250v2_alt	3110128	3110793	chr6_GL000250v2_alt:3110128-3110793	0	-	3110128	3110128	8553170	2	145,247,	0,418,
#Deleted in new
chr6_GL000250v2_alt	3111427	3111516	chr6_GL000250v2_alt:3111427-3111516	3	-	3111427	3111427	8553170	1	89,	0,
#Deleted in new
chr6_GL000250v2_alt	3111840	3112662	chr6_GL000250v2_alt:3111840-3112662	0	-	3111840	3111840	8553170	3	63,112,444,	0,195,378,
#Deleted in new
chr6_GL000250v2_alt	3113065	3115200	chr6_GL000250v2_alt:3113065-3115200	0	-	3113065	3115200	789624	10	114,79,69,105,126,71,106,91,42,60,	0,250,415,564,1026,1236,1392,1632,1947,2075,
#Deleted in new
chr6_GL000250v2_alt	3113161	3114805	chr6_GL000250v2_alt:3113161-3114805	0	-	3113161	3113161	8553170	8	18,79,69,105,126,71,106,154,	0,154,319,468,930,1140,1296,1490,
#Deleted in new
chr6_GL000250v2_alt	3113487	3114536	chr6_GL000250v2_alt:3113487-3114536	0	-	3113487	3113487	8553170	3	62,105,445,	0,142,604,
#Deleted in new
chr6_GL000250v2_alt	3113488	3114361	chr6_GL000250v2_alt:3113488-3114361	0	-	3113488	3113488	8553170	2	61,732,	0,141,
#Deleted in new
chr6_GL000250v2_alt	3113968	3115031	chr6_GL000250v2_alt:3113968-3115031	0	-	3113968	3113968	8553170	3	249,262,334,	0,333,729,
#Deleted in new
chr6_GL000250v2_alt	3114303	3115850	chr6_GL000250v2_alt:3114303-3115850	0	-	3114303	3114303	8553170	6	69,106,91,159,316,144,	0,154,394,592,837,1403,
#Deleted in new
chr6_GL000250v2_alt	3114310	3115040	chr6_GL000250v2_alt:3114310-3115040	0	-	3114310	3114310	8553170	4	62,106,137,145,	0,147,341,585,
#Deleted in new
chr6_GL000250v2_alt	3115022	3117047	chr6_GL000250v2_alt:3115022-3117047	0	-	3115022	3115022	8553170	4	434,91,95,42,	0,684,1803,1983,
#Deleted in new
chr6_GL000250v2_alt	3117209	3125571	chr6_GL000250v2_alt:3117209-3125571	0	-	3117209	3117209	8553170	8	117,82,165,128,101,85,125,204,	0,648,971,7011,7272,7618,7793,8158,
#Deleted in new
chr6_GL000250v2_alt	3117857	3124889	chr6_GL000250v2_alt:3117857-3124889	0	-	3117857	3117857	8553170	5	82,165,128,221,62,	0,323,6363,6624,6970,
#Deleted in new
chr6_GL000250v2_alt	3125596	3128110	chr6_GL000250v2_alt:3125596-3128110	0	-	3125596	3127828	789624	2	135,669,	0,1845,
#Deleted in new
chr6_GL000250v2_alt	3130006	3139596	chr6_GL000250v2_alt:3130006-3139596	3	-	3130367	3139369	0	5	487,60,31,68,230,	0,594,1081,8680,9360,
#Deleted in new
chr6_GL000250v2_alt	3130006	3139272	chr6_GL000250v2_alt:3130006-3139272	0	-	3130006	3130006	8553170	5	487,60,31,47,142,	0,594,1081,8680,9124,
#Deleted in new
chr6_GL000250v2_alt	3130006	3139429	chr6_GL000250v2_alt:3130006-3139429	0	-	3130006	3130006	8553170	4	487,60,31,63,	0,594,1081,9360,
#Deleted in new
chr6_GL000250v2_alt	3130006	3139271	chr6_GL000250v2_alt:3130006-3139271	0	-	3130006	3130006	8553170	5	487,60,31,68,174,	0,594,1081,8680,9091,
#Deleted in new
chr6_GL000250v2_alt	3130006	3139464	chr6_GL000250v2_alt:3130006-3139464	0	-	3130006	3130006	8553170	4	487,60,68,98,	0,594,8680,9360,
#Deleted in new
chr6_GL000250v2_alt	3130006	3139578	chr6_GL000250v2_alt:3130006-3139578	0	-	3130006	3130006	8553170	3	487,68,212,	0,8680,9360,
#Deleted in new
chr6_GL000250v2_alt	3135362	3139214	chr6_GL000250v2_alt:3135362-3139214	0	-	3135362	3135362	8553170	4	42,26,68,117,	0,128,3324,3735,
#Deleted in new
chr6_GL000250v2_alt	3142240	3147687	chr6_GL000250v2_alt:3142240-3147687	3	-	3142668	3144594	789624	2	2367,177,	0,5270,
#Deleted in new
chr6_GL000250v2_alt	3148085	3150568	chr6_GL000250v2_alt:3148085-3150568	3	+	3148378	3150304	0	1	2483,	0,
#Deleted in new
chr6_GL000250v2_alt	3148164	3150568	chr6_GL000250v2_alt:3148164-3150568	1	+	3148378	3150304	789624	2	289,1620,	0,784,
#Deleted in new
chr6_GL000250v2_alt	3160359	3162874	chr6_GL000250v2_alt:3160359-3162874	3	+	3160575	3162501	0	1	2515,	0,
#Deleted in new
chr6_GL000250v2_alt	3160572	3162501	chr6_GL000250v2_alt:3160572-3162501	1	+	3160572	3162501	789624	1	1929,	0,
#Deleted in new
chr6_GL000250v2_alt	3167222	3172376	chr6_GL000250v2_alt:3167222-3172376	1	+	3169944	3172278	789624	4	593,41,200,219,	0,802,2629,4935,
#Deleted in new
chr6_GL000250v2_alt	3167241	3172376	chr6_GL000250v2_alt:3167241-3172376	1	+	3169944	3172278	789624	4	142,41,200,219,	0,783,2610,4916,
#Deleted in new
chr6_GL000250v2_alt	3167522	3172376	chr6_GL000250v2_alt:3167522-3172376	1	+	3169944	3172278	789624	5	293,41,94,200,219,	0,502,1517,2329,4635,
#Deleted in new
chr6_GL000250v2_alt	3167522	3172376	chr6_GL000250v2_alt:3167522-3172376	1	+	3169944	3172278	789624	3	293,200,219,	0,2329,4635,
#Deleted in new
chr6_GL000250v2_alt	3167522	3172376	chr6_GL000250v2_alt:3167522-3172376	1	+	3169944	3172278	789624	4	150,41,200,219,	0,502,2329,4635,
#Deleted in new
chr6_GL000250v2_alt	3167532	3172376	chr6_GL000250v2_alt:3167532-3172376	3	+	3169944	3172278	789624	5	283,41,219,200,219,	0,492,1382,2319,4625,
#Deleted in new
chr6_GL000250v2_alt	3167536	3172381	chr6_GL000250v2_alt:3167536-3172381	1	+	3169944	3172278	789624	4	279,45,200,224,	0,488,2315,4621,
#Deleted in new
chr6_GL000250v2_alt	3167546	3172376	chr6_GL000250v2_alt:3167546-3172376	1	+	3169944	3172278	789624	5	269,41,223,200,219,	0,478,1364,2305,4611,
#Deleted in new
chr6_GL000250v2_alt	3167877	3167940	chr6_GL000250v2_alt:3167877-3167940	3	+	3167877	3167877	789624	1	63,	0,
#Deleted in new
chr6_GL000250v2_alt	3167899	3172376	chr6_GL000250v2_alt:3167899-3172376	1	+	3169944	3172278	789624	3	166,200,219,	0,1952,4258,
#Deleted in new
chr6_GL000250v2_alt	3169458	3172379	chr6_GL000250v2_alt:3169458-3172379	1	+	3169944	3172278	789624	2	593,222,	0,2699,
#Deleted in new
chr6_GL000250v2_alt	3169691	3169758	chr6_GL000250v2_alt:3169691-3169758	3	+	3169691	3169691	789624	1	67,	0,
#Deleted in new
chr6_GL000250v2_alt	3190274	3195412	chr6_GL000250v2_alt:3190274-3195412	0	-	3190274	3190274	8553170	3	2287,2150,179,	0,2383,4959,
#Deleted in new
chr6_GL000250v2_alt	3191667	3195522	chr6_GL000250v2_alt:3191667-3195522	3	-	3192334	3195392	789624	6	894,223,183,263,193,289,	0,990,1387,2136,2947,3566,
#Deleted in new
chr6_GL000250v2_alt	3191667	3195421	chr6_GL000250v2_alt:3191667-3195421	0	-	3191667	3191667	8553170	4	1570,263,193,188,	0,2136,2947,3566,
#Deleted in new
chr6_GL000250v2_alt	3191667	3195432	chr6_GL000250v2_alt:3191667-3195432	0	-	3194006	3195392	789624	5	894,223,183,263,199,	0,990,1387,2136,3566,
#Deleted in new
chr6_GL000250v2_alt	3191667	3195438	chr6_GL000250v2_alt:3191667-3195438	0	-	3192788	3195392	789624	6	894,137,183,263,193,205,	0,990,1387,2136,2947,3566,
#Deleted in new
chr6_GL000250v2_alt	3195807	3211616	chr6_GL000250v2_alt:3195807-3211616	1	-	3196242	3211595	789624	21	557,85,95,71,74,104,95,254,103,93,100,236,84,88,61,126,100,79,74,49,61,	0,1460,1624,1818,2123,2306,2498,2681,5963,6353,7409,7618,8120,8280,11267,11528,11736,12659,12863,13841,15748,
#Deleted in new
chr6_GL000250v2_alt	3195810	3211661	chr6_GL000250v2_alt:3195810-3211661	3	-	3196242	3211595	789624	20	554,85,95,71,74,104,95,254,103,93,100,236,84,88,61,100,79,74,49,106,	0,1457,1621,1815,2120,2303,2495,2678,5960,6350,7406,7615,8117,8277,11264,11733,12656,12860,13838,15745,
#Deleted in new
chr6_GL000250v2_alt	3195810	3210286	chr6_GL000250v2_alt:3195810-3210286	1	-	3196242	3208480	789624	21	554,85,95,71,74,104,95,254,103,93,100,236,84,88,61,126,100,79,74,49,109,	0,1457,1621,1815,2120,2303,2495,2678,5960,6350,7406,7615,8117,8277,11264,11525,11733,12656,12860,13838,14367,
#Deleted in new
chr6_GL000250v2_alt	3196192	3197296	chr6_GL000250v2_alt:3196192-3197296	0	-	3196192	3196192	8553170	2	172,220,	0,884,
#Deleted in new
chr6_GL000250v2_alt	3198305	3211582	chr6_GL000250v2_alt:3198305-3211582	0	-	3198305	3211582	789624	13	95,254,103,93,84,88,61,126,100,79,74,49,27,	0,183,3465,3855,5622,5782,8769,9030,9238,10161,10365,11343,13250,
#Deleted in new
chr6_GL000250v2_alt	3198674	3203816	chr6_GL000250v2_alt:3198674-3203816	0	-	3198674	3198674	8553170	4	68,103,93,391,	0,3096,3486,4751,
#Deleted in new
chr6_GL000250v2_alt	3202211	3203858	chr6_GL000250v2_alt:3202211-3203858	0	-	3202211	3202211	8553170	3	42,100,433,	0,1005,1214,
#Deleted in new
chr6_GL000250v2_alt	3207139	3211612	chr6_GL000250v2_alt:3207139-3211612	0	-	3207139	3207139	8553170	6	322,100,79,74,49,57,	0,404,1327,1531,2509,4416,
#Deleted in new
chr6_GL000250v2_alt	3207436	3211612	chr6_GL000250v2_alt:3207436-3211612	0	-	3207436	3207436	8553170	6	25,100,121,74,49,57,	0,107,988,1234,2212,4119,
#Deleted in new
chr6_GL000250v2_alt	3212373	3229824	chr6_GL000250v2_alt:3212373-3229824	1	-	3212698	3229824	789624	27	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,102,115,135,156,41,85,254,219,280,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9210,9469,9709,12652,12939,13071,16511,16854,17171,
#Deleted in new
chr6_GL000250v2_alt	3212373	3230306	chr6_GL000250v2_alt:3212373-3230306	1	-	3212698	3230299	0	28	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,102,115,135,156,41,85,254,219,67,49,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9210,9469,9709,12652,12939,13071,16511,16854,17171,17884,
#Deleted in new
chr6_GL000250v2_alt	3212373	3230299	chr6_GL000250v2_alt:3212373-3230299	1	-	3212698	3230299	789624	27	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,115,135,156,41,85,254,219,67,42,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9469,9709,12652,12939,13071,16511,16854,17171,17884,
#Deleted in new
chr6_GL000250v2_alt	3212373	3229844	chr6_GL000250v2_alt:3212373-3229844	1	-	3212698	3229824	789624	26	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,115,135,156,41,85,254,219,300,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9469,9709,12652,12939,13071,16511,16854,17171,
#Deleted in new
chr6_GL000250v2_alt	3212373	3219052	chr6_GL000250v2_alt:3212373-3219052	0	-	3212373	3212373	8553170	10	506,176,79,87,116,78,145,168,155,1526,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,
#Deleted in new
chr6_GL000250v2_alt	3212373	3217421	chr6_GL000250v2_alt:3212373-3217421	0	-	3212373	3212373	8553170	9	506,176,79,87,116,78,145,168,162,	0,914,1255,2940,3135,3603,4047,4633,4886,
#Deleted in new
chr6_GL000250v2_alt	3212373	3217756	chr6_GL000250v2_alt:3212373-3217756	0	-	3212373	3212373	8553170	9	506,176,79,87,116,78,145,408,230,	0,914,1255,2940,3135,3603,4047,4633,5153,
#Deleted in new
chr6_GL000250v2_alt	3212373	3229126	chr6_GL000250v2_alt:3212373-3229126	0	-	3212373	3212373	8553170	26	506,176,79,87,116,78,145,168,155,126,102,123,107,83,183,236,144,149,102,115,135,156,41,85,301,242,	0,914,1255,2940,3135,3603,4047,4633,4886,5132,6822,7016,7236,7818,8020,8282,8604,8840,9210,9469,9709,12652,12939,13071,13607,16511,
#Deleted in new
chr6_GL000250v2_alt	3216375	3216669	chr6_GL000250v2_alt:3216375-3216669	3	+	3216375	3216375	8553170	2	51,172,	0,122,
#Deleted in new
chr6_GL000250v2_alt	3216433	3219679	chr6_GL000250v2_alt:3216433-3219679	2	-	3216433	3219679	789624	7	132,168,155,144,102,123,70,	0,573,826,1093,2762,2956,3176,
#Deleted in new
chr6_GL000250v2_alt	3217287	3219734	chr6_GL000250v2_alt:3217287-3219734	0	-	3217287	3217287	8553170	4	127,105,102,345,	0,239,1908,2102,
#Deleted in new
chr6_GL000250v2_alt	3225036	3225805	chr6_GL000250v2_alt:3225036-3225805	0	-	3225036	3225036	8553170	3	145,41,361,	0,276,408,
#Deleted in new
chr6_GL000250v2_alt	3228022	3230309	chr6_GL000250v2_alt:3228022-3230309	0	-	3228022	3228022	8553170	4	1116,219,67,52,	0,1205,1522,2235,
#Deleted in new
chr6_GL000250v2_alt	3406267	3418718	chr6_GL000250v2_alt:3406267-3418718	3	-	3406267	3418718	789624	6	306,333,306,291,297,369,	0,5366,7700,8368,10745,12082,
#Deleted in new
chr6_GL000250v2_alt	3411108	3411229	chr6_GL000250v2_alt:3411108-3411229	3	-	3411108	3411108	8553170	1	121,	0,
#Deleted in new
chr6_GL000250v2_alt	3480956	3485682	chr6_GL000250v2_alt:3480956-3485682	3	-	3481819	3484701	789624	6	1040,186,216,91,81,112,	0,1178,2009,3450,3737,4614,
#Deleted in new
chr6_GL000250v2_alt	3480956	3484550	chr6_GL000250v2_alt:3480956-3484550	1	-	3481819	3484425	789624	4	1040,186,539,144,	0,1178,2009,3450,
#Deleted in new
chr6_GL000250v2_alt	3480956	3484521	chr6_GL000250v2_alt:3480956-3484521	0	-	3480956	3480956	8553170	3	1040,186,1556,	0,1178,2009,
#Deleted in new
chr6_GL000250v2_alt	3480956	3484535	chr6_GL000250v2_alt:3480956-3484535	0	-	3480956	3480956	8553170	3	1040,186,129,	0,1178,3450,
#Deleted in new
chr6_GL000250v2_alt	3480956	3482455	chr6_GL000250v2_alt:3480956-3482455	0	-	3480956	3480956	8553170	2	1040,321,	0,1178,
#Deleted in new
chr6_GL000250v2_alt	3483092	3486972	chr6_GL000250v2_alt:3483092-3486972	0	-	3483092	3484701	789624	5	89,91,81,100,136,	0,1314,1601,3243,3744,
#Deleted in new
chr6_GL000250v2_alt	3484579	3486559	chr6_GL000250v2_alt:3484579-3486559	0	-	3484579	3484579	8553170	3	195,201,224,	0,991,1756,
#Deleted in new
chr6_GL000250v2_alt	3485400	3486932	chr6_GL000250v2_alt:3485400-3486932	0	-	3485400	3485400	789624	3	371,100,96,	0,935,1436,
#Deleted in new
chr6_GL000250v2_alt	3485400	3486964	chr6_GL000250v2_alt:3485400-3486964	0	-	3485400	3485400	789624	3	371,100,77,	0,935,1487,
#Deleted in new
chr6_GL000250v2_alt	3485400	3486507	chr6_GL000250v2_alt:3485400-3486507	0	-	3485400	3485400	8553170	2	371,172,	0,935,
#Deleted in new
chr6_GL000250v2_alt	3485938	3486938	chr6_GL000250v2_alt:3485938-3486938	0	-	3485938	3485938	789624	3	320,71,102,	0,426,898,
#Deleted in new
chr6_GL000250v2_alt	3485983	3486925	chr6_GL000250v2_alt:3485983-3486925	0	-	3485983	3485983	789624	3	275,71,158,	0,381,784,
#Deleted in new
chr6_GL000250v2_alt	3486039	3488577	chr6_GL000250v2_alt:3486039-3488577	0	+	3487193	3488577	789624	6	196,209,191,154,96,108,	0,755,1146,1589,2247,2430,
#Deleted in new
chr6_GL000250v2_alt	3486121	3496279	chr6_GL000250v2_alt:3486121-3496279	3	+	3486225	3495551	0	9	114,191,154,96,108,84,85,55,872,	0,1064,1507,2165,2348,4115,4318,9047,9286,
#Deleted in new
chr6_GL000250v2_alt	3486140	3490449	chr6_GL000250v2_alt:3486140-3490449	0	+	3486140	3486140	8553170	6	95,191,96,108,84,10,	0,1045,2146,2329,4096,4299,
#Deleted in new
chr6_GL000250v2_alt	3486175	3496279	chr6_GL000250v2_alt:3486175-3496279	1	+	3487193	3495551	789624	10	60,406,191,154,96,108,84,85,55,872,	0,422,1010,1453,2111,2294,4061,4264,8993,9232,
#Deleted in new
chr6_GL000250v2_alt	3486443	3500883	chr6_GL000250v2_alt:3486443-3500883	0	+	3487193	3498801	0	16	560,191,154,96,108,84,85,55,79,483,110,96,171,80,154,372,	0,742,1185,1843,2026,3793,3996,8725,10736,12296,12859,13068,13245,13508,13661,14068,
#Deleted in new
chr6_GL000250v2_alt	3486597	3496281	chr6_GL000250v2_alt:3486597-3496281	1	+	3487193	3495551	789624	9	406,191,154,96,108,84,85,55,874,	0,588,1031,1689,1872,3639,3842,8571,8810,
#Deleted in new
chr6_GL000250v2_alt	3486693	3496279	chr6_GL000250v2_alt:3486693-3496279	1	+	3487193	3495551	789624	9	300,191,154,96,108,84,85,55,872,	0,492,935,1593,1776,3543,3746,8475,8714,
#Deleted in new
chr6_GL000250v2_alt	3486736	3496279	chr6_GL000250v2_alt:3486736-3496279	1	+	3487193	3495551	789624	9	109,191,154,96,108,84,85,55,872,	0,449,892,1550,1733,3500,3703,8432,8671,
#Deleted in new
chr6_GL000250v2_alt	3486765	3490524	chr6_GL000250v2_alt:3486765-3490524	0	+	3487193	3490524	789624	6	238,191,16,108,84,85,	0,420,1601,1704,3471,3674,
#Deleted in new
chr6_GL000250v2_alt	3486795	3495197	chr6_GL000250v2_alt:3486795-3495197	0	+	3486795	3486795	8553170	7	208,191,154,16,108,84,29,	0,390,833,1571,1674,3441,8373,
#Deleted in new
chr6_GL000250v2_alt	3486820	3504580	chr6_GL000250v2_alt:3486820-3504580	0	+	3487193	3498801	0	21	183,191,154,96,108,84,85,55,79,95,123,110,96,155,80,154,627,209,98,1143,256,	0,365,808,1466,1649,3416,3619,8348,10359,11919,12279,12482,12691,12884,13131,13284,13691,15074,15689,16196,17504,
#Deleted in new
chr6_GL000250v2_alt	3487064	3490296	chr6_GL000250v2_alt:3487064-3490296	0	+	3487193	3490296	789624	5	312,154,96,108,60,	0,564,1222,1405,3172,
#Deleted in new
chr6_GL000250v2_alt	3487076	3488382	chr6_GL000250v2_alt:3487076-3488382	0	+	3487193	3488382	789624	2	300,96,	0,1210,
#Deleted in new
chr6_GL000250v2_alt	3487616	3488358	chr6_GL000250v2_alt:3487616-3488358	0	+	3487616	3487616	8553170	2	166,72,	0,670,
#Deleted in new
chr6_GL000250v2_alt	3489709	3497256	chr6_GL000250v2_alt:3489709-3497256	0	+	3489709	3489709	8553170	4	611,85,55,77,	0,730,5459,7470,
#Deleted in new
chr6_GL000250v2_alt	3490089	3490922	chr6_GL000250v2_alt:3490089-3490922	0	+	3490089	3490089	8553170	2	231,483,	0,350,
#Deleted in new
chr6_GL000250v2_alt	3490242	3499607	chr6_GL000250v2_alt:3490242-3499607	0	+	3490242	3498801	789624	7	78,85,55,103,483,110,96,	0,197,4926,6937,8497,9060,9269,
#Deleted in new
chr6_GL000250v2_alt	3497183	3500883	chr6_GL000250v2_alt:3497183-3500883	3	+	3498767	3500558	789624	9	75,129,123,110,96,171,80,154,372,	0,1556,1916,2119,2328,2505,2768,2921,3328,
#Deleted in new
chr6_GL000250v2_alt	3497205	3500883	chr6_GL000250v2_alt:3497205-3500883	1	+	3498767	3500558	789624	9	77,129,123,110,96,171,80,154,372,	0,1534,1894,2097,2306,2483,2746,2899,3306,
#Deleted in new
chr6_GL000250v2_alt	3497260	3500258	chr6_GL000250v2_alt:3497260-3500258	0	+	3498767	3500258	789624	8	22,129,123,110,96,111,80,154,	0,1479,1839,2042,2251,2488,2691,2844,
#Deleted in new
chr6_GL000250v2_alt	3497836	3500883	chr6_GL000250v2_alt:3497836-3500883	0	+	3497836	3497836	8553170	6	1386,110,96,171,307,372,	0,1466,1675,1852,2115,2675,
#Deleted in new
chr6_GL000250v2_alt	3498794	3499771	chr6_GL000250v2_alt:3498794-3499771	0	+	3498794	3498794	8553170	4	40,123,110,260,	0,305,508,717,
#Deleted in new
chr6_GL000250v2_alt	3500144	3500883	chr6_GL000250v2_alt:3500144-3500883	0	+	3500144	3500144	8553170	2	83,372,	0,367,
#Deleted in new
chr6_GL000250v2_alt	3500813	3508724	chr6_GL000250v2_alt:3500813-3508724	1	-	3501877	3504098	789624	7	1237,73,96,176,134,209,309,	0,1754,1953,2213,2725,3085,7602,
#Deleted in new
chr6_GL000250v2_alt	3500813	3509682	chr6_GL000250v2_alt:3500813-3509682	1	-	3501877	3504098	789624	7	1237,73,96,176,134,209,571,	0,1754,1953,2213,2725,3085,8298,
#Deleted in new
chr6_GL000250v2_alt	3500813	3510698	chr6_GL000250v2_alt:3500813-3510698	3	-	3501877	3504098	789624	7	1237,73,96,176,134,209,96,	0,1754,1953,2213,2725,3085,9789,
#Deleted in new
chr6_GL000250v2_alt	3500813	3505717	chr6_GL000250v2_alt:3500813-3505717	1	-	3501877	3504098	789624	7	1237,73,96,176,134,209,178,	0,1754,1953,2213,2725,3085,4726,
#Deleted in new
chr6_GL000250v2_alt	3500813	3509927	chr6_GL000250v2_alt:3500813-3509927	1	-	3501877	3504098	789624	7	1237,73,96,176,134,209,92,	0,1754,1953,2213,2725,3085,9022,
#Deleted in new
chr6_GL000250v2_alt	3500813	3510388	chr6_GL000250v2_alt:3500813-3510388	1	-	3501877	3504098	789624	7	1237,73,96,176,134,209,243,	0,1754,1953,2213,2725,3085,9332,
#Deleted in new
chr6_GL000250v2_alt	3500813	3509944	chr6_GL000250v2_alt:3500813-3509944	0	-	3500813	3500813	8553170	5	1237,73,96,209,833,	0,1754,1953,3085,8298,
#Deleted in new
chr6_GL000250v2_alt	3502766	3508499	chr6_GL000250v2_alt:3502766-3508499	0	-	3502766	3502766	8553170	5	96,176,134,256,84,	0,260,772,1085,5649,
#Deleted in new
chr6_GL000250v2_alt	3510955	3513395	chr6_GL000250v2_alt:3510955-3513395	3	+	3511113	3512928	789624	6	298,19,113,55,118,565,	0,1187,1297,1523,1655,1875,
#Deleted in new
chr6_GL000250v2_alt	3511038	3512375	chr6_GL000250v2_alt:3511038-3512375	0	+	3511038	3511038	8553170	3	215,19,123,	0,1104,1214,
#Deleted in new
chr6_GL000250v2_alt	3513569	3516839	chr6_GL000250v2_alt:3513569-3516839	1	-	3513775	3516824	789624	10	272,127,27,160,183,88,65,154,107,67,	0,383,638,1571,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000250v2_alt	3513569	3516848	chr6_GL000250v2_alt:3513569-3516848	1	-	3514154	3516824	789624	10	272,109,142,131,183,88,65,196,107,76,	0,556,1279,1600,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000250v2_alt	3513569	3516926	chr6_GL000250v2_alt:3513569-3516926	3	-	3513744	3516824	0	11	272,127,27,142,131,183,88,65,196,107,154,	0,383,638,1279,1600,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000250v2_alt	3513569	3514237	chr6_GL000250v2_alt:3513569-3514237	0	-	3513569	3513569	8553170	2	272,285,	0,383,
#Deleted in new
chr6_GL000250v2_alt	3513569	3516848	chr6_GL000250v2_alt:3513569-3516848	0	-	3513569	3513569	789624	10	272,127,27,142,131,183,88,65,196,366,	0,383,638,1279,1600,1873,2146,2356,2587,2913,
#Deleted in new
chr6_GL000250v2_alt	3513569	3515533	chr6_GL000250v2_alt:3513569-3515533	0	-	3513569	3513569	8553170	4	272,109,142,364,	0,556,1279,1600,
#Deleted in new
chr6_GL000250v2_alt	3513569	3515533	chr6_GL000250v2_alt:3513569-3515533	0	-	3513569	3513569	8553170	5	272,127,27,142,364,	0,383,638,1279,1600,
#Deleted in new
chr6_GL000250v2_alt	3513569	3516924	chr6_GL000250v2_alt:3513569-3516924	1	-	3513744	3516824	789624	5	272,83,123,107,152,	0,383,2660,2913,3203,
#Deleted in new
chr6_GL000250v2_alt	3513569	3516924	chr6_GL000250v2_alt:3513569-3516924	1	-	3513744	3516208	789624	10	272,127,142,131,183,88,65,196,107,152,	0,383,1279,1600,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000250v2_alt	3513569	3516924	chr6_GL000250v2_alt:3513569-3516924	1	-	3513744	3516824	789624	11	272,127,27,142,131,183,88,113,196,107,152,	0,383,638,1279,1600,1873,2146,2308,2587,2913,3203,
#Deleted in new
chr6_GL000250v2_alt	3513569	3516924	chr6_GL000250v2_alt:3513569-3516924	1	-	3514154	3516824	789624	10	272,109,142,131,183,88,113,196,107,152,	0,556,1279,1600,1873,2146,2308,2587,2913,3203,
#Deleted in new
chr6_GL000250v2_alt	3513744	3516824	chr6_GL000250v2_alt:3513744-3516824	1	-	3513744	3515178	789624	8	97,127,27,142,131,59,30,52,	0,208,463,1104,1425,1698,2815,3028,
#Deleted in new
chr6_GL000250v2_alt	3515469	3516837	chr6_GL000250v2_alt:3515469-3516837	0	-	3515469	3516824	789624	6	156,88,117,183,107,65,	0,246,456,700,1013,1303,
#Deleted in new
chr6_GL000250v2_alt	3515481	3516839	chr6_GL000250v2_alt:3515481-3516839	0	-	3515481	3516824	789624	6	144,88,113,196,107,67,	0,234,396,675,1001,1291,
#Deleted in new
chr6_GL000250v2_alt	3516010	3516924	chr6_GL000250v2_alt:3516010-3516924	1	-	3516010	3516824	789624	4	32,196,107,152,	0,146,472,762,
#Deleted in new
chr6_GL000250v2_alt	3517334	3522785	chr6_GL000250v2_alt:3517334-3522785	3	-	3518980	3522514	789624	9	1739,87,89,154,136,191,248,74,492,	0,1868,2077,2506,2911,3230,3521,3987,4959,
#Deleted in new
chr6_GL000250v2_alt	3518854	3520114	chr6_GL000250v2_alt:3518854-3520114	0	-	3518854	3518854	8553170	2	646,274,	0,986,
#Deleted in new
chr6_GL000250v2_alt	3519571	3522541	chr6_GL000250v2_alt:3519571-3522541	0	-	3519571	3519571	8553170	6	423,136,191,248,74,248,	0,674,993,1284,1750,2722,
#Deleted in new
chr6_GL000250v2_alt	3519831	3521415	chr6_GL000250v2_alt:3519831-3521415	0	-	3519831	3519831	8553170	4	163,136,191,560,	0,414,733,1024,
#Deleted in new
chr6_GL000250v2_alt	3520878	3521676	chr6_GL000250v2_alt:3520878-3521676	0	-	3520878	3520878	8553170	2	225,355,	0,443,
#Deleted in new
chr6_GL000250v2_alt	3523364	3525505	chr6_GL000250v2_alt:3523364-3525505	1	-	3523964	3525112	789624	4	738,200,103,435,	0,943,1382,1706,
#Deleted in new
chr6_GL000250v2_alt	3523364	3528122	chr6_GL000250v2_alt:3523364-3528122	3	-	3523964	3525112	789624	8	738,200,103,59,84,81,93,98,	0,943,1382,1706,2275,3544,3971,4660,
#Deleted in new
chr6_GL000250v2_alt	3523364	3525467	chr6_GL000250v2_alt:3523364-3525467	1	-	3523964	3525081	789624	4	738,200,125,397,	0,943,1382,1706,
#Deleted in new
chr6_GL000250v2_alt	3523364	3525484	chr6_GL000250v2_alt:3523364-3525484	0	-	3524464	3525112	789624	4	738,162,103,414,	0,943,1382,1706,
#Deleted in new
chr6_GL000250v2_alt	3523365	3525717	chr6_GL000250v2_alt:3523365-3525717	1	-	3524372	3525717	789624	5	737,200,103,59,78,	0,942,1381,1705,2274,
#Deleted in new
chr6_GL000250v2_alt	3527441	3536999	chr6_GL000250v2_alt:3527441-3536999	3	-	3528035	3536999	789624	12	1308,98,148,296,139,82,220,176,384,524,113,253,	0,1481,2082,2456,3579,3807,4084,6000,6286,7245,8938,9305,
#Deleted in new
chr6_GL000250v2_alt	3527441	3536780	chr6_GL000250v2_alt:3527441-3536780	0	-	3527441	3527441	8553170	10	1308,98,148,296,139,82,220,176,2765,34,	0,1481,2082,2456,3579,3807,4084,6000,6286,9305,
#Deleted in new
chr6_GL000250v2_alt	3527441	3529576	chr6_GL000250v2_alt:3527441-3529576	0	-	3527441	3527441	8553170	2	1579,53,	0,2082,
#Deleted in new
chr6_GL000250v2_alt	3648977	3704153	chr6_GL000250v2_alt:3648977-3704153	0	-	3648977	3703952	789624	22	21,21,21,24,24,21,21,21,21,21,21,39,21,21,21,21,21,30,33,33,87,214,	0,6091,6728,7200,8269,14205,15652,19054,19529,20232,22590,23212,26852,33004,38380,38905,49433,49539,51201,52056,53174,54962,
#Deleted in new
chr6_GL000250v2_alt	3655068	3704125	chr6_GL000250v2_alt:3655068-3704125	3	-	3655068	3703952	789624	19	21,21,24,21,21,21,21,21,21,39,90,21,21,21,30,33,33,87,186,	0,637,1109,8114,9561,12963,13438,14141,16499,17121,26913,32289,32814,43342,43448,45110,45965,47083,48871,
#Deleted in new
chr6_GL000250v2_alt	3657808	3658768	chr6_GL000250v2_alt:3657808-3658768	7	+	3657808	3657808	16724991	1	960,	0,
#Deleted in new
chr6_GL000250v2_alt	3685114	3685221	chr6_GL000250v2_alt:3685114-3685221	3	+	3685114	3685114	8553170	1	107,	0,
#Deleted in new
chr6_GL000250v2_alt	3722740	3725917	chr6_GL000250v2_alt:3722740-3725917	3	+	3722740	3722740	789624	3	244,128,238,	0,1103,2939,
#Deleted in new
chr6_GL000250v2_alt	3726193	3739359	chr6_GL000250v2_alt:3726193-3739359	3	-	3726199	3739352	789624	7	95,282,348,21,282,348,86,	0,781,2076,7820,8970,10974,13080,
#Deleted in new
chr6_GL000250v2_alt	3726966	3739352	chr6_GL000250v2_alt:3726966-3739352	0	-	3734018	3739352	789624	5	290,344,21,112,79,	0,1307,7047,10437,12307,
#Deleted in new
chr6_GL000250v2_alt	3726966	3739352	chr6_GL000250v2_alt:3726966-3739352	1	-	3726966	3728516	789624	5	290,348,21,107,79,	0,1303,7047,10442,12307,
#Deleted in new
chr6_GL000250v2_alt	3726966	3739352	chr6_GL000250v2_alt:3726966-3739352	1	-	3726966	3739352	789624	6	290,348,21,282,348,79,	0,1303,7047,8197,10201,12307,
#Deleted in new
chr6_GL000250v2_alt	3737265	3739359	chr6_GL000250v2_alt:3737265-3739359	0	-	3737265	3739352	789624	2	247,86,	0,2008,
#Deleted in new
chr6_GL000250v2_alt	3792062	3805744	chr6_GL000250v2_alt:3792062-3805744	7	-	3792062	3792062	16724991	2	267,76,	0,13606,
#Deleted in new
chr6_GL000250v2_alt	3821940	3822089	chr6_GL000250v2_alt:3821940-3822089	3	-	3821940	3821940	8553170	1	149,	0,
#Deleted in new
chr6_GL000250v2_alt	3823888	3837634	chr6_GL000250v2_alt:3823888-3837634	3	-	3824827	3837535	789624	6	953,24,111,282,270,199,	0,1752,2249,3043,5625,13547,
#Deleted in new
chr6_GL000250v2_alt	4023852	4024675	chr6_GL000250v2_alt:4023852-4024675	0	+	4023852	4023852	8553170	2	143,238,	0,585,
#Deleted in new
chr6_GL000250v2_alt	4023877	4024680	chr6_GL000250v2_alt:4023877-4024680	3	+	4023877	4023877	8553170	3	118,35,243,	0,376,560,
#Deleted in new
chr6_GL000250v2_alt	4024232	4024683	chr6_GL000250v2_alt:4024232-4024683	0	+	4024232	4024232	8553170	2	56,246,	0,205,
#Deleted in new
chr6_GL000250v2_alt	4036578	4037516	chr6_GL000250v2_alt:4036578-4037516	7	-	4036578	4036578	16724991	2	80,277,	0,661,
#Deleted in new
chr6_GL000250v2_alt	4047519	4053351	chr6_GL000250v2_alt:4047519-4053351	3	+	4047581	4052533	789624	4	144,249,282,973,	0,3778,4410,4859,
#Deleted in new
chr6_GL000250v2_alt	4047523	4053026	chr6_GL000250v2_alt:4047523-4053026	1	+	4047581	4052533	789624	5	140,249,282,175,306,	0,3774,4406,4855,5197,
#Deleted in new
chr6_GL000250v2_alt	4062236	4069674	chr6_GL000250v2_alt:4062236-4069674	3	-	4062591	4069610	789624	6	369,24,111,282,267,161,	0,1184,1676,2753,5563,7277,
#Deleted in new
chr6_GL000250v2_alt	4062236	4069672	chr6_GL000250v2_alt:4062236-4069672	1	-	4063373	4069610	789624	5	1208,111,282,267,159,	0,1676,2753,5563,7277,
#Deleted in new
chr6_GL000250v2_alt	4062236	4069630	chr6_GL000250v2_alt:4062236-4069630	1	-	4062591	4069610	789624	5	369,24,282,267,117,	0,1184,2753,5563,7277,
#Deleted in new
chr6_GL000250v2_alt	4062526	4069606	chr6_GL000250v2_alt:4062526-4069606	0	-	4062591	4069606	789624	4	79,282,267,93,	0,2463,5273,6987,
#Deleted in new
chr6_GL000250v2_alt	4117786	4122072	chr6_GL000250v2_alt:4117786-4122072	3	-	4118239	4121975	0	6	489,32,111,282,270,188,	0,677,960,1557,2281,4098,
#Deleted in new
chr6_GL000250v2_alt	4117786	4122000	chr6_GL000250v2_alt:4117786-4122000	0	-	4120199	4121975	789624	6	489,32,111,282,158,116,	0,677,960,1557,2281,4098,
#Deleted in new
chr6_GL000250v2_alt	4118070	4122012	chr6_GL000250v2_alt:4118070-4122012	0	-	4118070	4118070	8553170	5	205,32,879,270,128,	0,393,676,1997,3814,
#Deleted in new
chr6_GL000250v2_alt	4119393	4121934	chr6_GL000250v2_alt:4119393-4121934	0	-	4119393	4121934	789624	3	223,270,50,	0,674,2491,
#Deleted in new
chr6_GL000250v2_alt	4126846	4143590	chr6_GL000250v2_alt:4126846-4143590	3	-	4127302	4143099	0	12	486,137,160,174,189,129,198,206,131,115,497,75,	0,7419,7949,8286,8637,10352,10646,13173,13662,15556,15760,16669,
#Deleted in new
chr6_GL000250v2_alt	4130453	4143643	chr6_GL000250v2_alt:4130453-4143643	1	-	4133720	4143099	789624	12	3447,137,160,174,189,129,198,206,131,115,497,128,	0,3812,4342,4679,5030,6745,7039,9566,10055,11949,12153,13062,
#Deleted in new
chr6_GL000250v2_alt	4133809	4135593	chr6_GL000250v2_alt:4133809-4135593	0	-	4133809	4133809	8553170	4	91,137,160,461,	0,456,986,1323,
#Deleted in new
chr6_GL000250v2_alt	4137160	4137599	chr6_GL000250v2_alt:4137160-4137599	0	-	4137160	4137160	8553170	2	167,107,	0,332,
#Deleted in new
chr6_GL000250v2_alt	4145581	4149568	chr6_GL000250v2_alt:4145581-4149568	3	-	4145823	4149278	0	6	331,205,130,112,148,425,	0,814,1417,1955,2225,3562,
#Deleted in new
chr6_GL000250v2_alt	4145581	4148885	chr6_GL000250v2_alt:4145581-4148885	1	-	4145823	4148861	789624	6	331,205,130,40,148,171,	0,814,1417,1955,2225,3133,
#Deleted in new
chr6_GL000250v2_alt	4145581	4148912	chr6_GL000250v2_alt:4145581-4148912	1	-	4145823	4148861	0	6	331,205,130,112,148,198,	0,814,1417,1955,2225,3133,
#Deleted in new
chr6_GL000250v2_alt	4145581	4146899	chr6_GL000250v2_alt:4145581-4146899	0	-	4145581	4145581	8553170	2	331,504,	0,814,
#Deleted in new
chr6_GL000250v2_alt	4145885	4149516	chr6_GL000250v2_alt:4145885-4149516	0	-	4145885	4145885	8553170	5	27,205,130,418,373,	0,510,1113,1651,3258,
#Deleted in new
chr6_GL000250v2_alt	4148950	4151360	chr6_GL000250v2_alt:4148950-4151360	3	+	4148950	4148950	789624	2	189,1078,	0,1332,
#Deleted in new
chr6_GL000250v2_alt	4148972	4150684	chr6_GL000250v2_alt:4148972-4150684	0	+	4148972	4148972	8553170	3	167,301,490,	0,462,1222,
#Deleted in new
chr6_GL000250v2_alt	4148997	4150851	chr6_GL000250v2_alt:4148997-4150851	0	+	4148997	4148997	789624	3	142,226,569,	0,512,1285,
#Deleted in new
chr6_GL000250v2_alt	4148997	4151075	chr6_GL000250v2_alt:4148997-4151075	0	+	4148997	4148997	789624	3	142,61,793,	0,677,1285,
#Deleted in new
chr6_GL000250v2_alt	4148998	4150560	chr6_GL000250v2_alt:4148998-4150560	0	+	4148998	4148998	8553170	2	737,278,	0,1284,
#Deleted in new
chr6_GL000250v2_alt	4149000	4164450	chr6_GL000250v2_alt:4149000-4164450	1	+	4161011	4164397	789624	6	139,68,132,130,142,181,	0,12002,13127,13869,14228,15269,
#Deleted in new
chr6_GL000250v2_alt	4149002	4150943	chr6_GL000250v2_alt:4149002-4150943	0	+	4149002	4149002	8553170	2	137,749,	0,1192,
#Deleted in new
chr6_GL000250v2_alt	4149700	4163302	chr6_GL000250v2_alt:4149700-4163302	0	+	4161011	4163302	789624	5	35,68,132,130,74,	0,11302,12427,13169,13528,
#Deleted in new
chr6_GL000250v2_alt	4150073	4158843	chr6_GL000250v2_alt:4150073-4158843	3	-	4150443	4158681	0	11	577,137,163,174,189,129,198,206,131,115,940,	0,1859,2304,2710,3443,3781,5109,5733,6900,7179,7830,
#Deleted in new
chr6_GL000250v2_alt	4150073	4155005	chr6_GL000250v2_alt:4150073-4155005	0	-	4150073	4150073	8553170	5	577,137,163,174,1489,	0,1859,2304,2710,3443,
#Deleted in new
chr6_GL000250v2_alt	4150539	4153095	chr6_GL000250v2_alt:4150539-4153095	0	-	4150539	4150539	8553170	3	111,608,312,	0,1393,2244,
#Deleted in new
chr6_GL000250v2_alt	4159012	4163765	chr6_GL000250v2_alt:4159012-4163765	0	+	4159012	4159012	8553170	3	142,1997,537,	0,1990,4216,
#Deleted in new
chr6_GL000250v2_alt	4159025	4164450	chr6_GL000250v2_alt:4159025-4164450	1	+	4159094	4164397	0	6	129,68,132,130,142,181,	0,1977,3102,3844,4203,5244,
#Deleted in new
chr6_GL000250v2_alt	4159070	4184429	chr6_GL000250v2_alt:4159070-4184429	3	+	4159094	4184317	789624	6	84,68,130,142,93,156,	0,1932,3799,4158,22841,25203,
#Deleted in new
chr6_GL000250v2_alt	4160961	4163587	chr6_GL000250v2_alt:4160961-4163587	0	+	4160961	4160961	8553170	4	109,132,130,359,	0,1166,1908,2267,
#Deleted in new
chr6_GL000250v2_alt	4184001	4184678	chr6_GL000250v2_alt:4184001-4184678	7	-	4184001	4184001	16724991	1	677,	0,
#Deleted in new
chr6_GL000250v2_alt	4184046	4184663	chr6_GL000250v2_alt:4184046-4184663	5	-	4184046	4184046	16724991	1	617,	0,
#Deleted in new
chr6_GL000250v2_alt	4201237	4201312	chr6_GL000250v2_alt:4201237-4201312	7	+	4201237	4201237	16724991	1	75,	0,
#Deleted in new
chr6_GL000250v2_alt	4239473	4245915	chr6_GL000250v2_alt:4239473-4245915	3	-	4239815	4245652	0	6	359,36,117,285,282,318,	0,713,907,2543,4055,6124,
#Deleted in new
chr6_GL000250v2_alt	4239473	4245866	chr6_GL000250v2_alt:4239473-4245866	1	-	4239832	4245652	789624	5	390,121,285,282,269,	0,903,2543,4055,6124,
#Deleted in new
chr6_GL000250v2_alt	4239473	4242284	chr6_GL000250v2_alt:4239473-4242284	0	-	4239815	4242284	789624	3	359,36,268,	0,713,2543,
#Deleted in new
chr6_GL000250v2_alt	4239473	4243533	chr6_GL000250v2_alt:4239473-4243533	0	-	4239815	4243533	789624	4	359,117,285,5,	0,907,2543,4055,
#Deleted in new
chr6_GL000250v2_alt	4239473	4245829	chr6_GL000250v2_alt:4239473-4245829	0	-	4239473	4239473	8553170	2	4337,232,	0,6124,
#Deleted in new
chr6_GL000250v2_alt	4239473	4241746	chr6_GL000250v2_alt:4239473-4241746	0	-	4239473	4239473	8553170	2	359,1560,	0,713,
#Deleted in new
chr6_GL000250v2_alt	4239473	4241731	chr6_GL000250v2_alt:4239473-4241731	0	-	4239473	4239473	8553170	3	359,36,1351,	0,713,907,
#Deleted in new
chr6_GL000250v2_alt	4242208	4257972	chr6_GL000250v2_alt:4242208-4257972	0	-	4242208	4257886	789624	4	93,282,63,174,	0,1320,3389,15590,
#Deleted in new
chr6_GL000250v2_alt	4253459	4257972	chr6_GL000250v2_alt:4253459-4257972	1	-	4253713	4257886	0	5	259,129,279,285,174,	0,661,1001,1909,4339,
#Deleted in new
chr6_GL000250v2_alt	4253459	4257911	chr6_GL000250v2_alt:4253459-4257911	3	-	4253713	4257886	789624	4	259,129,279,113,	0,661,1001,4339,
#Deleted in new
chr6_GL000250v2_alt	4253459	4257958	chr6_GL000250v2_alt:4253459-4257958	1	-	4253713	4257886	789624	5	259,129,177,285,160,	0,661,1001,1909,4339,
#Deleted in new
chr6_GL000250v2_alt	4253459	4254521	chr6_GL000250v2_alt:4253459-4254521	0	-	4253459	4253459	8553170	2	259,401,	0,661,
#Deleted in new
chr6_GL000250v2_alt	4253459	4257958	chr6_GL000250v2_alt:4253459-4257958	0	-	4253459	4253459	8553170	4	259,126,1193,160,	0,664,1001,4339,
#Deleted in new
chr6_GL000250v2_alt	4253587	4255653	chr6_GL000250v2_alt:4253587-4255653	0	-	4253587	4253587	8553170	4	131,129,15,285,	0,533,873,1781,
#Deleted in new
chr6_GL000250v2_alt	4253620	4254739	chr6_GL000250v2_alt:4253620-4254739	0	-	4253620	4253620	8553170	3	98,129,279,	0,500,840,
#Deleted in new
chr6_GL000250v2_alt	4254120	4257311	chr6_GL000250v2_alt:4254120-4257311	0	-	4254120	4257311	789624	4	129,279,285,178,	0,340,1248,3013,
#Deleted in new
chr6_GL000250v2_alt	4254506	4255653	chr6_GL000250v2_alt:4254506-4255653	0	-	4254506	4255642	789624	2	233,285,	0,862,
#Deleted in new
chr6_GL000250v2_alt	4254933	4257884	chr6_GL000250v2_alt:4254933-4257884	0	-	4254933	4254933	8553170	3	720,178,86,	0,2200,2865,
#Deleted in new
chr6_GL000250v2_alt	4369248	4385378	chr6_GL000250v2_alt:4369248-4385378	3	-	4373329	4378232	0	6	779,167,282,246,199,31,	0,4069,4450,5072,8884,16099,
#Deleted in new
chr6_GL000250v2_alt	4369686	4378277	chr6_GL000250v2_alt:4369686-4378277	0	-	4369686	4369686	8553170	2	4880,145,	0,8446,
#Deleted in new
chr6_GL000250v2_alt	4372339	4373928	chr6_GL000250v2_alt:4372339-4373928	0	-	4373329	4373928	789624	2	1145,230,	0,1359,
#Deleted in new
chr6_GL000250v2_alt	4373377	4378299	chr6_GL000250v2_alt:4373377-4378299	0	-	4373377	4378232	789624	4	107,271,158,167,	0,321,1031,4755,
#Deleted in new
chr6_GL000250v2_alt	4373698	4385435	chr6_GL000250v2_alt:4373698-4385435	0	-	4373698	4378232	789624	4	282,246,302,88,	0,622,4434,11649,
#Deleted in new
chr6_GL000250v2_alt	4373783	4385423	chr6_GL000250v2_alt:4373783-4385423	0	-	4373783	4373783	8553170	3	197,246,76,	0,537,11564,
#Deleted in new
chr6_GL000250v2_alt	4373841	4378295	chr6_GL000250v2_alt:4373841-4378295	0	-	4373841	4373841	8553170	3	139,246,195,	0,479,4259,
#Deleted in new
chr6_GL000250v2_alt	4378163	4385443	chr6_GL000250v2_alt:4378163-4385443	0	-	4378163	4378232	789624	2	209,96,	0,7184,
#Deleted in new
chr6_GL000250v2_alt	4380587	4391853	chr6_GL000250v2_alt:4380587-4391853	3	+	4380703	4390890	0	6	216,264,282,111,24,663,	0,4752,9014,9843,10283,10603,
#Deleted in new
chr6_GL000250v2_alt	4380633	4391853	chr6_GL000250v2_alt:4380633-4391853	1	+	4380703	4390890	789624	6	170,264,192,111,24,663,	0,4706,9058,9797,10237,10557,
#Deleted in new
chr6_GL000250v2_alt	4380671	4385900	chr6_GL000250v2_alt:4380671-4385900	0	+	4380671	4380671	8553170	2	132,561,	0,4668,
#Deleted in new
chr6_GL000250v2_alt	4384118	4384528	chr6_GL000250v2_alt:4384118-4384528	7	+	4384118	4384118	16724991	1	410,	0,
#Deleted in new
chr6_GL000250v2_alt	4385053	4389609	chr6_GL000250v2_alt:4385053-4389609	0	+	4385053	4385053	8553170	3	149,264,8,	0,286,4548,
#Deleted in new
chr6_GL000250v2_alt	4385053	4388680	chr6_GL000250v2_alt:4385053-4388680	0	+	4385053	4385053	8553170	3	149,264,499,	0,286,3128,
#Deleted in new
chr6_GL000250v2_alt	4385110	4389883	chr6_GL000250v2_alt:4385110-4389883	0	+	4385110	4385110	8553170	2	493,282,	0,4491,
#Deleted in new
chr6_GL000250v2_alt	4385154	4390541	chr6_GL000250v2_alt:4385154-4390541	0	+	4385154	4390541	789624	4	48,247,282,111,	0,202,4447,5276,
#Deleted in new
chr6_GL000250v2_alt	4385339	4391853	chr6_GL000250v2_alt:4385339-4391853	0	+	4385339	4391199	789624	5	264,282,128,24,663,	0,4262,5091,5531,5851,
#Deleted in new
chr6_GL000250v2_alt	4385608	4388558	chr6_GL000250v2_alt:4385608-4388558	0	+	4385608	4385608	8553170	3	291,132,377,	0,1066,2573,
#Deleted in new
chr6_GL000250v2_alt	4396404	4401947	chr6_GL000250v2_alt:4396404-4401947	7	-	4396404	4396404	16724991	4	151,282,245,55,	0,366,1140,5488,
#Deleted in new
chr6_GL000250v2_alt	4408418	4411955	chr6_GL000250v2_alt:4408418-4411955	7	-	4408418	4408418	16724991	6	39,60,167,211,136,63,	0,144,2173,2786,3112,3474,
#Deleted in new
chr6_GL000250v2_alt	4417075	4423773	chr6_GL000250v2_alt:4417075-4423773	5	+	4417075	4417075	16724991	3	165,264,759,	0,4505,5939,
#Deleted in new
chr6_GL000250v2_alt	4417140	4433705	chr6_GL000250v2_alt:4417140-4433705	7	+	4417140	4417140	16724991	5	100,264,281,111,20,	0,4440,15298,16114,16545,
#Deleted in new
chr6_GL000250v2_alt	4435836	4435963	chr6_GL000250v2_alt:4435836-4435963	7	-	4435836	4435836	16724991	1	127,	0,
#Deleted in new
chr6_GL000250v2_alt	4670201	4670897	chr6_GL000250v2_alt:4670201-4670897	7	-	4670201	4670201	16724991	1	696,	0,
#Deleted in new
chr6_GL000251v2_alt	653	5624	chr6_GL000251v2_alt:653-5624	3	-	653	5624	789624	2	132,87,	0,4884,
#Deleted in new
chr6_GL000251v2_alt	15892	24832	chr6_GL000251v2_alt:15892-24832	3	+	15894	24048	0	5	89,154,118,100,991,	0,3439,5766,6309,7949,
#Deleted in new
chr6_GL000251v2_alt	15892	24832	chr6_GL000251v2_alt:15892-24832	1	+	15894	22263	0	4	89,154,100,991,	0,3439,6309,7949,
#Deleted in new
chr6_GL000251v2_alt	63387	77211	chr6_GL000251v2_alt:63387-77211	3	-	63387	76593	789624	4	321,1493,148,1038,	0,1137,5766,12786,
#Deleted in new
chr6_GL000251v2_alt	77253	81620	chr6_GL000251v2_alt:77253-81620	3	+	77253	77253	8553170	2	355,2518,	0,1849,
#Deleted in new
chr6_GL000251v2_alt	138123	144314	chr6_GL000251v2_alt:138123-144314	3	-	138123	138123	789624	3	366,171,44,	0,610,6147,
#Deleted in new
chr6_GL000251v2_alt	138692	144356	chr6_GL000251v2_alt:138692-144356	0	-	138692	138692	8553170	2	212,86,	0,5578,
#Deleted in new
chr6_GL000251v2_alt	222689	223577	chr6_GL000251v2_alt:222689-223577	7	+	222689	222689	16724991	1	888,	0,
#Deleted in new
chr6_GL000251v2_alt	274330	274702	chr6_GL000251v2_alt:274330-274702	7	-	274330	274330	16724991	1	372,	0,
#Deleted in new
chr6_GL000251v2_alt	328387	329525	chr6_GL000251v2_alt:328387-329525	3	-	328387	328387	8553170	2	452,257,	0,881,
#Deleted in new
chr6_GL000251v2_alt	350141	353890	chr6_GL000251v2_alt:350141-353890	3	-	350141	350141	8553170	2	2386,67,	0,3682,
#Deleted in new
chr6_GL000251v2_alt	351927	352559	chr6_GL000251v2_alt:351927-352559	7	+	351927	351927	16724991	1	632,	0,
#Deleted in new
chr6_GL000251v2_alt	379537	380612	chr6_GL000251v2_alt:379537-380612	7	-	379537	379537	16724991	1	1075,	0,
#Deleted in new
chr6_GL000251v2_alt	387228	388019	chr6_GL000251v2_alt:387228-388019	3	+	387228	387228	789624	2	199,212,	0,579,
#Deleted in new
chr6_GL000251v2_alt	393696	414687	chr6_GL000251v2_alt:393696-414687	1	-	394949	414331	789624	9	1272,112,27,33,116,23,231,96,776,	0,1552,4234,5802,5967,8693,17014,18894,20215,
#Deleted in new
chr6_GL000251v2_alt	393696	414688	chr6_GL000251v2_alt:393696-414688	3	-	394764	414331	789624	8	1664,27,33,116,23,231,96,777,	0,4234,5802,5967,8693,17014,18894,20215,
#Deleted in new
chr6_GL000251v2_alt	393696	399680	chr6_GL000251v2_alt:393696-399680	0	-	394764	399680	789624	5	1664,27,72,33,17,	0,4234,4490,5802,5967,
#Deleted in new
chr6_GL000251v2_alt	393697	414612	chr6_GL000251v2_alt:393697-414612	0	-	393697	393697	8553170	6	5834,116,23,231,96,701,	0,5966,8692,17013,18893,20214,
#Deleted in new
chr6_GL000251v2_alt	395168	398279	chr6_GL000251v2_alt:395168-398279	0	-	395168	395168	8553170	2	192,349,	0,2762,
#Deleted in new
chr6_GL000251v2_alt	401999	412675	chr6_GL000251v2_alt:401999-412675	0	-	401999	401999	8553170	3	413,231,85,	0,8711,10591,
#Deleted in new
chr6_GL000251v2_alt	405471	410882	chr6_GL000251v2_alt:405471-410882	0	-	405471	405471	8553170	2	515,172,	0,5239,
#Deleted in new
chr6_GL000251v2_alt	406341	406441	chr6_GL000251v2_alt:406341-406441	3	+	406341	406341	8553170	1	100,	0,
#Deleted in new
chr6_GL000251v2_alt	430281	430942	chr6_GL000251v2_alt:430281-430942	3	+	430308	430692	789624	2	150,316,	0,345,
#Deleted in new
chr6_GL000251v2_alt	455538	456869	chr6_GL000251v2_alt:455538-456869	7	-	455538	455538	16724991	1	1331,	0,
#Deleted in new
chr6_GL000251v2_alt	463948	464247	chr6_GL000251v2_alt:463948-464247	3	+	463948	463948	8553170	1	299,	0,
#Deleted in new
chr6_GL000251v2_alt	472675	473957	chr6_GL000251v2_alt:472675-473957	3	+	472675	472675	8553170	3	30,194,808,	0,110,474,
#Deleted in new
chr6_GL000251v2_alt	473272	475009	chr6_GL000251v2_alt:473272-475009	3	+	473272	473272	8553170	2	80,237,	0,1500,
#Deleted in new
chr6_GL000251v2_alt	481255	491796	chr6_GL000251v2_alt:481255-491796	0	-	481255	481255	8553170	6	1801,105,561,82,168,309,	0,3948,4701,8727,9112,10232,
#Deleted in new
chr6_GL000251v2_alt	481341	491740	chr6_GL000251v2_alt:481341-491740	3	-	481470	490424	789624	7	1715,105,127,92,82,269,253,	0,3862,4615,5084,8641,9074,10146,
#Deleted in new
chr6_GL000251v2_alt	513166	514094	chr6_GL000251v2_alt:513166-514094	7	-	513166	513166	16724991	1	928,	0,
#Deleted in new
chr6_GL000251v2_alt	530700	531728	chr6_GL000251v2_alt:530700-531728	3	-	530700	531663	789624	1	1028,	0,
#Deleted in new
chr6_GL000251v2_alt	550473	563010	chr6_GL000251v2_alt:550473-563010	3	+	550473	563010	789624	3	133,52,229,	0,1124,12308,
#Deleted in new
chr6_GL000251v2_alt	558309	559082	chr6_GL000251v2_alt:558309-559082	7	-	558309	558309	16724991	1	773,	0,
#Deleted in new
chr6_GL000251v2_alt	563058	563654	chr6_GL000251v2_alt:563058-563654	7	-	563058	563058	16724991	1	596,	0,
#Deleted in new
chr6_GL000251v2_alt	572850	573857	chr6_GL000251v2_alt:572850-573857	3	-	572850	573792	789624	1	1007,	0,
#Deleted in new
chr6_GL000251v2_alt	587488	588427	chr6_GL000251v2_alt:587488-588427	7	+	587488	587488	16724991	1	939,	0,
#Deleted in new
chr6_GL000251v2_alt	598438	599374	chr6_GL000251v2_alt:598438-599374	3	+	598438	599374	789624	1	936,	0,
#Deleted in new
chr6_GL000251v2_alt	610758	615455	chr6_GL000251v2_alt:610758-615455	3	+	610758	610758	8553170	2	137,252,	0,4445,
#Deleted in new
chr6_GL000251v2_alt	624423	625360	chr6_GL000251v2_alt:624423-625360	7	-	624423	624423	16724991	1	937,	0,
#Deleted in new
chr6_GL000251v2_alt	659845	661117	chr6_GL000251v2_alt:659845-661117	3	+	660178	661117	789624	1	1272,	0,
#Deleted in new
chr6_GL000251v2_alt	668071	669007	chr6_GL000251v2_alt:668071-669007	7	+	668071	668071	16724991	1	936,	0,
#Deleted in new
chr6_GL000251v2_alt	701807	702745	chr6_GL000251v2_alt:701807-702745	7	+	701807	701807	16724991	1	938,	0,
#Deleted in new
chr6_GL000251v2_alt	710538	753653	chr6_GL000251v2_alt:710538-753653	3	+	710538	710538	789624	3	79,230,155,	0,39861,42960,
#Deleted in new
chr6_GL000251v2_alt	715792	716723	chr6_GL000251v2_alt:715792-716723	7	-	715792	715792	16724991	1	931,	0,
#Deleted in new
chr6_GL000251v2_alt	749270	750647	chr6_GL000251v2_alt:749270-750647	7	-	749270	749270	16724991	2	291,588,	0,789,
#Deleted in new
chr6_GL000251v2_alt	755029	755989	chr6_GL000251v2_alt:755029-755989	7	-	755029	755029	16724991	1	960,	0,
#Deleted in new
chr6_GL000251v2_alt	777299	778242	chr6_GL000251v2_alt:777299-778242	7	+	777299	777299	16724991	1	943,	0,
#Deleted in new
chr6_GL000251v2_alt	793279	794245	chr6_GL000251v2_alt:793279-794245	3	+	793279	794245	789624	1	966,	0,
#Deleted in new
chr6_GL000251v2_alt	816217	817652	chr6_GL000251v2_alt:816217-817652	7	-	816217	816217	16724991	1	1435,	0,
#Deleted in new
chr6_GL000251v2_alt	841819	893003	chr6_GL000251v2_alt:841819-893003	1	-	841819	842785	789624	2	1048,69,	0,51115,
#Deleted in new
chr6_GL000251v2_alt	841819	918416	chr6_GL000251v2_alt:841819-918416	3	-	841819	842785	789624	4	1048,76,38,104,	0,67238,67656,76493,
#Deleted in new
chr6_GL000251v2_alt	841819	842867	chr6_GL000251v2_alt:841819-842867	1	-	841819	842785	789624	1	1048,	0,
#Deleted in new
chr6_GL000251v2_alt	860027	936549	chr6_GL000251v2_alt:860027-936549	3	-	860941	861892	789624	2	1869,142,	0,76380,
#Deleted in new
chr6_GL000251v2_alt	860027	861896	chr6_GL000251v2_alt:860027-861896	1	-	860941	861892	789624	1	1869,	0,
#Deleted in new
chr6_GL000251v2_alt	883015	884084	chr6_GL000251v2_alt:883015-884084	3	+	883160	884084	789624	1	1069,	0,
#Deleted in new
chr6_GL000251v2_alt	903730	904677	chr6_GL000251v2_alt:903730-904677	7	+	903730	903730	16724991	2	582,270,	0,677,
#Deleted in new
chr6_GL000251v2_alt	911952	914915	chr6_GL000251v2_alt:911952-914915	3	-	913142	914090	789624	2	2229,253,	0,2710,
#Deleted in new
chr6_GL000251v2_alt	911952	943524	chr6_GL000251v2_alt:911952-943524	1	-	913142	914090	789624	5	2229,48,125,124,85,	0,3409,4797,6360,31487,
#Deleted in new
chr6_GL000251v2_alt	911952	914181	chr6_GL000251v2_alt:911952-914181	1	-	913142	914090	789624	1	2229,	0,
#Deleted in new
chr6_GL000251v2_alt	925754	927403	chr6_GL000251v2_alt:925754-927403	3	+	926464	927403	789624	1	1649,	0,
#Deleted in new
chr6_GL000251v2_alt	926387	927426	chr6_GL000251v2_alt:926387-927426	1	+	926458	927403	789624	1	1039,	0,
#Deleted in new
chr6_GL000251v2_alt	943633	950780	chr6_GL000251v2_alt:943633-950780	3	+	948221	949172	789624	4	27,116,51,2830,	0,1273,3222,4317,
#Deleted in new
chr6_GL000251v2_alt	943640	950780	chr6_GL000251v2_alt:943640-950780	1	+	948221	949172	789624	4	20,116,51,2834,	0,1266,3215,4306,
#Deleted in new
chr6_GL000251v2_alt	943655	947538	chr6_GL000251v2_alt:943655-947538	0	+	943655	943655	8553170	4	5,116,164,211,	0,1251,2818,3672,
#Deleted in new
chr6_GL000251v2_alt	946223	950780	chr6_GL000251v2_alt:946223-950780	1	+	948221	949172	789624	3	414,1259,580,	0,1703,3977,
#Deleted in new
chr6_GL000251v2_alt	947891	949185	chr6_GL000251v2_alt:947891-949185	1	+	948221	949172	789624	1	1294,	0,
#Deleted in new
chr6_GL000251v2_alt	947946	949172	chr6_GL000251v2_alt:947946-949172	0	+	947946	947946	8553170	2	256,717,	0,509,
#Deleted in new
chr6_GL000251v2_alt	947946	949172	chr6_GL000251v2_alt:947946-949172	0	+	947946	947946	8553170	2	256,730,	0,496,
#Deleted in new
chr6_GL000251v2_alt	951047	956260	chr6_GL000251v2_alt:951047-956260	7	-	951047	951047	16724991	2	360,22,	0,5191,
#Deleted in new
chr6_GL000251v2_alt	961476	962523	chr6_GL000251v2_alt:961476-962523	7	-	961476	961476	16724991	1	1047,	0,
#Deleted in new
chr6_GL000251v2_alt	973217	974354	chr6_GL000251v2_alt:973217-974354	3	-	973217	974354	789624	1	1137,	0,
#Deleted in new
chr6_GL000251v2_alt	975722	976128	chr6_GL000251v2_alt:975722-976128	7	-	975722	975722	16724991	1	406,	0,
#Deleted in new
chr6_GL000251v2_alt	983960	997008	chr6_GL000251v2_alt:983960-997008	3	+	983960	983960	8553170	4	31,57,500,289,	0,7812,9660,12759,
#Deleted in new
chr6_GL000251v2_alt	1015882	1020031	chr6_GL000251v2_alt:1015882-1020031	3	+	1015882	1015882	789624	3	165,95,2517,	0,529,1632,
#Deleted in new
chr6_GL000251v2_alt	1015938	1018620	chr6_GL000251v2_alt:1015938-1018620	0	+	1015938	1015938	8553170	4	109,95,117,78,	0,473,1576,2604,
#Deleted in new
chr6_GL000251v2_alt	1024166	1025250	chr6_GL000251v2_alt:1024166-1025250	7	-	1024166	1024166	16724991	1	1084,	0,
#Deleted in new
chr6_GL000251v2_alt	1039699	1040647	chr6_GL000251v2_alt:1039699-1040647	7	+	1039699	1039699	16724991	1	948,	0,
#Deleted in new
chr6_GL000251v2_alt	1042092	1046406	chr6_GL000251v2_alt:1042092-1046406	3	-	1042360	1046182	0	2	739,251,	0,4063,
#Deleted in new
chr6_GL000251v2_alt	1042092	1114519	chr6_GL000251v2_alt:1042092-1114519	3	-	1090022	1114272	0	19	739,176,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,553,	0,47928,48881,49247,49956,50778,51284,51489,52988,53616,55311,56938,57630,65489,66140,66492,67693,68278,71874,
#Deleted in new
chr6_GL000251v2_alt	1060388	1061316	chr6_GL000251v2_alt:1060388-1061316	7	+	1060388	1060388	16724991	1	928,	0,
#Deleted in new
chr6_GL000251v2_alt	1063938	1064228	chr6_GL000251v2_alt:1063938-1064228	7	+	1063938	1063938	16724991	1	290,	0,
#Deleted in new
chr6_GL000251v2_alt	1068728	1068812	chr6_GL000251v2_alt:1068728-1068812	3	+	1068728	1068728	789624	1	84,	0,
#Deleted in new
chr6_GL000251v2_alt	1068987	1069505	chr6_GL000251v2_alt:1068987-1069505	7	+	1068987	1068987	16724991	1	518,	0,
#Deleted in new
chr6_GL000251v2_alt	1073934	1075518	chr6_GL000251v2_alt:1073934-1075518	3	+	1074424	1075363	789624	1	1584,	0,
#Deleted in new
chr6_GL000251v2_alt	1088709	1119641	chr6_GL000251v2_alt:1088709-1119641	1	-	1090022	1118866	0	23	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,186,204,85,311,	0,2264,2630,3339,4161,4667,4872,6371,6999,8694,10321,11013,18872,19523,19875,21076,21661,25257,26858,28229,29167,30072,30621,
#Deleted in new
chr6_GL000251v2_alt	1088709	1119616	chr6_GL000251v2_alt:1088709-1119616	1	-	1090022	1118866	0	22	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,204,85,286,	0,2264,2630,3339,4161,4667,4872,6371,6999,8694,10321,11013,18872,19523,19875,21076,21661,25257,26858,29167,30072,30621,
#Deleted in new
chr6_GL000251v2_alt	1088709	1095213	chr6_GL000251v2_alt:1088709-1095213	0	-	1088709	1088709	8553170	5	1350,94,108,117,133,	0,4161,4667,4872,6371,
#Deleted in new
chr6_GL000251v2_alt	1088709	1119415	chr6_GL000251v2_alt:1088709-1119415	0	-	1088709	1088709	8553170	23	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,122,204,85,85,	0,2264,2630,3339,4161,4667,4872,6371,6999,8694,10321,11013,18872,19523,19875,21076,21661,25257,26858,28293,29167,30072,30621,
#Deleted in new
chr6_GL000251v2_alt	1088714	1114494	chr6_GL000251v2_alt:1088714-1114494	1	-	1090022	1114272	0	18	1482,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,528,	0,2259,2625,3334,4156,4662,4867,6366,6994,8689,10316,11008,18867,19518,19870,21071,21656,25252,
#Deleted in new
chr6_GL000251v2_alt	1089793	1091629	chr6_GL000251v2_alt:1089793-1091629	0	-	1089793	1089793	8553170	3	403,144,290,	0,1180,1546,
#Deleted in new
chr6_GL000251v2_alt	1091392	1118866	chr6_GL000251v2_alt:1091392-1118866	0	-	1091392	1091392	8553170	19	76,128,94,108,117,133,78,64,243,192,66,102,171,135,161,21,186,204,85,	0,656,1478,1984,2189,3688,6011,7638,8330,16189,16840,17192,18393,18978,22574,24175,25546,26484,27389,
#Deleted in new
chr6_GL000251v2_alt	1091889	1093069	chr6_GL000251v2_alt:1091889-1093069	0	-	1091889	1091889	8553170	2	287,199,	0,981,
#Deleted in new
chr6_GL000251v2_alt	1094933	1099079	chr6_GL000251v2_alt:1094933-1099079	0	-	1094933	1094933	8553170	3	280,78,49,	0,2470,4097,
#Deleted in new
chr6_GL000251v2_alt	1095184	1118868	chr6_GL000251v2_alt:1095184-1118868	1	-	1095184	1118866	0	14	29,78,64,243,192,66,102,171,135,161,21,186,204,87,	0,2219,3846,4538,12397,13048,13400,14601,15186,18782,20383,21754,22692,23597,
#Deleted in new
chr6_GL000251v2_alt	1108284	1110742	chr6_GL000251v2_alt:1108284-1110742	0	-	1108284	1108284	8553170	4	14,102,171,372,	0,300,1501,2086,
#Deleted in new
chr6_GL000251v2_alt	1116379	1119548	chr6_GL000251v2_alt:1116379-1119548	0	-	1116379	1116379	8553170	4	745,204,85,218,	0,1497,2402,2951,
#Deleted in new
chr6_GL000251v2_alt	1122535	1122819	chr6_GL000251v2_alt:1122535-1122819	7	-	1122535	1122535	16724991	1	284,	0,
#Deleted in new
chr6_GL000251v2_alt	1143452	1158843	chr6_GL000251v2_alt:1143452-1158843	1	+	1143681	1157650	0	7	317,348,114,21,21,21,1207,	0,2336,9164,10655,10916,13713,14184,
#Deleted in new
chr6_GL000251v2_alt	1143519	1152725	chr6_GL000251v2_alt:1143519-1152725	0	+	1143519	1143519	8553170	3	250,343,109,	0,2274,9097,
#Deleted in new
chr6_GL000251v2_alt	1143533	1158845	chr6_GL000251v2_alt:1143533-1158845	1	+	1143681	1157650	0	8	236,348,114,21,21,117,21,1209,	0,2255,9083,10574,10835,13212,13632,14103,
#Deleted in new
chr6_GL000251v2_alt	1143563	1158845	chr6_GL000251v2_alt:1143563-1158845	1	+	1143681	1157344	0	7	206,348,114,21,21,117,1680,	0,2225,9053,10544,10805,13182,13602,
#Deleted in new
chr6_GL000251v2_alt	1143601	1146394	chr6_GL000251v2_alt:1143601-1146394	0	+	1143601	1143601	8553170	2	168,606,	0,2187,
#Deleted in new
chr6_GL000251v2_alt	1143681	1158845	chr6_GL000251v2_alt:1143681-1158845	3	+	1143681	1157650	0	7	88,114,21,21,117,21,1209,	0,8935,10426,10687,13064,13484,13955,
#Deleted in new
chr6_GL000251v2_alt	1143681	1158845	chr6_GL000251v2_alt:1143681-1158845	1	+	1143681	1157915	0	8	88,348,114,21,21,48,21,959,	0,2107,8935,10426,10687,12957,13484,14205,
#Deleted in new
chr6_GL000251v2_alt	1143681	1158845	chr6_GL000251v2_alt:1143681-1158845	1	+	1143681	1157915	0	7	88,348,114,21,21,21,959,	0,2107,8935,10426,10687,13484,14205,
#Deleted in new
chr6_GL000251v2_alt	1143681	1158845	chr6_GL000251v2_alt:1143681-1158845	1	+	1143681	1157650	0	8	88,348,114,21,21,48,21,1209,	0,2107,8935,10426,10687,12957,13484,13955,
#Deleted in new
chr6_GL000251v2_alt	1143681	1158845	chr6_GL000251v2_alt:1143681-1158845	1	+	1143681	1157915	789624	8	88,348,114,21,21,117,21,959,	0,2107,8935,10426,10687,13064,13484,14205,
#Deleted in new
chr6_GL000251v2_alt	1143687	1158845	chr6_GL000251v2_alt:1143687-1158845	0	+	1143687	1157915	0	6	82,348,114,21,21,959,	0,2101,8929,10420,10681,14199,
#Deleted in new
chr6_GL000251v2_alt	1145788	1158845	chr6_GL000251v2_alt:1145788-1158845	0	+	1145788	1157650	789624	6	348,114,21,21,21,1209,	0,6828,8319,8580,11377,11848,
#Deleted in new
chr6_GL000251v2_alt	1145788	1158845	chr6_GL000251v2_alt:1145788-1158845	0	+	1145788	1145788	8553170	8	348,138,114,21,21,117,21,959,	0,5306,6828,8319,8580,10957,11377,12098,
#Deleted in new
chr6_GL000251v2_alt	1145788	1158845	chr6_GL000251v2_alt:1145788-1158845	0	+	1145788	1145788	8553170	8	348,138,114,21,21,117,21,1209,	0,5306,6828,8319,8580,10957,11377,11848,
#Deleted in new
chr6_GL000251v2_alt	1158864	1163654	chr6_GL000251v2_alt:1158864-1163654	1	-	1158972	1163503	789624	4	1367,102,127,274,	0,3001,3548,4516,
#Deleted in new
chr6_GL000251v2_alt	1158955	1167618	chr6_GL000251v2_alt:1158955-1167618	3	-	1158972	1163503	789624	6	1276,102,127,33,393,49,	0,2910,3457,4425,4518,8614,
#Deleted in new
chr6_GL000251v2_alt	1158972	1163802	chr6_GL000251v2_alt:1158972-1163802	1	-	1158972	1163802	789624	4	1126,67,145,21,	0,2928,3440,4809,
#Deleted in new
chr6_GL000251v2_alt	1194637	1195060	chr6_GL000251v2_alt:1194637-1195060	7	-	1194637	1194637	16724991	1	423,	0,
#Deleted in new
chr6_GL000251v2_alt	1206634	1210386	chr6_GL000251v2_alt:1206634-1210386	1	+	1207323	1210267	789624	8	226,222,270,276,276,117,33,124,	0,531,883,1398,2256,2672,3236,3628,
#Deleted in new
chr6_GL000251v2_alt	1206840	1207831	chr6_GL000251v2_alt:1206840-1207831	7	-	1206840	1206840	16724991	1	991,	0,
#Deleted in new
chr6_GL000251v2_alt	1207138	1208091	chr6_GL000251v2_alt:1207138-1208091	0	+	1207323	1208091	789624	3	249,270,59,	0,379,894,
#Deleted in new
chr6_GL000251v2_alt	1207199	1210385	chr6_GL000251v2_alt:1207199-1210385	1	+	1207323	1210267	789624	7	188,270,276,276,117,33,123,	0,318,833,1691,2107,2671,3063,
#Deleted in new
chr6_GL000251v2_alt	1207251	1208275	chr6_GL000251v2_alt:1207251-1208275	0	+	1207251	1207251	8553170	2	536,243,	0,781,
#Deleted in new
chr6_GL000251v2_alt	1207267	1211152	chr6_GL000251v2_alt:1207267-1211152	3	+	1207323	1211031	789624	7	120,270,276,276,117,33,414,	0,250,765,1623,2039,2603,3471,
#Deleted in new
chr6_GL000251v2_alt	1207286	1210386	chr6_GL000251v2_alt:1207286-1210386	0	+	1207286	1207286	8553170	5	28,187,117,33,124,	0,1693,2020,2584,2976,
#Deleted in new
chr6_GL000251v2_alt	1207293	1208947	chr6_GL000251v2_alt:1207293-1208947	0	+	1207293	1207293	8553170	4	94,158,276,57,	0,336,739,1597,
#Deleted in new
chr6_GL000251v2_alt	1207323	1210386	chr6_GL000251v2_alt:1207323-1210386	1	+	1207323	1210267	0	6	64,270,276,117,33,124,	0,194,709,1983,2547,2939,
#Deleted in new
chr6_GL000251v2_alt	1207363	1208212	chr6_GL000251v2_alt:1207363-1208212	0	+	1207363	1207363	8553170	2	424,163,	0,686,
#Deleted in new
chr6_GL000251v2_alt	1207799	1209159	chr6_GL000251v2_alt:1207799-1209159	0	+	1207799	1207799	8553170	2	509,269,	0,1091,
#Deleted in new
chr6_GL000251v2_alt	1207898	1210386	chr6_GL000251v2_alt:1207898-1210386	0	+	1207898	1210267	789624	6	44,202,276,117,33,124,	0,208,992,1408,1972,2364,
#Deleted in new
chr6_GL000251v2_alt	1208016	1210386	chr6_GL000251v2_alt:1208016-1210386	0	+	1208016	1208016	8553170	4	292,276,117,516,	0,874,1290,1854,
#Deleted in new
chr6_GL000251v2_alt	1208913	1222378	chr6_GL000251v2_alt:1208913-1222378	0	+	1208913	1208913	8553170	5	253,117,33,67,153,	0,393,957,13058,13312,
#Deleted in new
chr6_GL000251v2_alt	1209313	1213206	chr6_GL000251v2_alt:1209313-1213206	0	+	1209313	1209313	8553170	2	110,1395,	0,2498,
#Deleted in new
chr6_GL000251v2_alt	1209393	1211152	chr6_GL000251v2_alt:1209393-1211152	0	+	1209393	1211031	789624	3	30,51,414,	0,459,1345,
#Deleted in new
chr6_GL000251v2_alt	1210456	1232895	chr6_GL000251v2_alt:1210456-1232895	0	-	1210456	1210456	789624	6	539,131,471,336,278,150,	0,1763,11359,11944,20548,22289,
#Deleted in new
chr6_GL000251v2_alt	1210524	1210995	chr6_GL000251v2_alt:1210524-1210995	7	-	1210524	1210524	16724991	1	471,	0,
#Deleted in new
chr6_GL000251v2_alt	1218866	1232839	chr6_GL000251v2_alt:1218866-1232839	3	-	1218866	1218866	8553170	6	1804,236,121,336,255,94,	0,2949,3318,3534,10451,13879,
#Deleted in new
chr6_GL000251v2_alt	1221608	1222294	chr6_GL000251v2_alt:1221608-1222294	0	-	1221608	1221608	8553170	2	443,110,	0,576,
#Deleted in new
chr6_GL000251v2_alt	1225575	1232815	chr6_GL000251v2_alt:1225575-1232815	7	-	1225575	1225575	16724991	6	125,144,266,299,255,70,	0,2278,2536,3205,3742,7170,
#Deleted in new
chr6_GL000251v2_alt	1232134	1232359	chr6_GL000251v2_alt:1232134-1232359	7	+	1232134	1232134	16724991	1	225,	0,
#Deleted in new
chr6_GL000251v2_alt	1234215	1234317	chr6_GL000251v2_alt:1234215-1234317	3	+	1234215	1234215	8553170	1	102,	0,
#Deleted in new
chr6_GL000251v2_alt	1234571	1234992	chr6_GL000251v2_alt:1234571-1234992	7	-	1234571	1234571	16724991	1	421,	0,
#Deleted in new
chr6_GL000251v2_alt	1275134	1281358	chr6_GL000251v2_alt:1275134-1281358	7	+	1275134	1275134	16724991	7	47,68,196,429,191,1981,456,	0,355,756,1083,1979,2341,5768,
#Deleted in new
chr6_GL000251v2_alt	1275535	1276510	chr6_GL000251v2_alt:1275535-1276510	7	-	1275535	1275535	16724991	1	975,	0,
#Deleted in new
chr6_GL000251v2_alt	1275686	1281358	chr6_GL000251v2_alt:1275686-1281358	5	+	1275686	1275686	16724991	3	400,249,615,	0,531,5057,
#Deleted in new
chr6_GL000251v2_alt	1276003	1281358	chr6_GL000251v2_alt:1276003-1281358	5	+	1276003	1276003	16724991	3	83,249,4245,	0,214,1110,
#Deleted in new
chr6_GL000251v2_alt	1276014	1276896	chr6_GL000251v2_alt:1276014-1276896	5	+	1276014	1276014	16724991	3	72,249,192,	0,203,690,
#Deleted in new
chr6_GL000251v2_alt	1283987	1285997	chr6_GL000251v2_alt:1283987-1285997	7	+	1283987	1283987	16724991	5	258,276,128,37,48,	0,846,1246,1775,1962,
#Deleted in new
chr6_GL000251v2_alt	1286766	1287563	chr6_GL000251v2_alt:1286766-1287563	7	-	1286766	1286766	16724991	1	797,	0,
#Deleted in new
chr6_GL000251v2_alt	1296134	1296266	chr6_GL000251v2_alt:1296134-1296266	7	-	1296134	1296134	16724991	1	132,	0,
#Deleted in new
chr6_GL000251v2_alt	1310528	1314694	chr6_GL000251v2_alt:1310528-1314694	3	+	1310600	1313944	789624	8	78,82,270,276,276,117,33,365,	0,869,1080,1576,2451,2849,3411,3801,
#Deleted in new
chr6_GL000251v2_alt	1310540	1314698	chr6_GL000251v2_alt:1310540-1314698	1	+	1311406	1313944	0	8	66,185,270,276,276,117,92,300,	0,754,1068,1564,2439,2837,3399,3858,
#Deleted in new
chr6_GL000251v2_alt	1310946	1311927	chr6_GL000251v2_alt:1310946-1311927	7	-	1310946	1310946	16724991	1	981,	0,
#Deleted in new
chr6_GL000251v2_alt	1311382	1314694	chr6_GL000251v2_alt:1311382-1314694	1	+	1311406	1313944	0	7	97,270,276,276,117,33,365,	0,226,722,1597,1995,2557,2947,
#Deleted in new
chr6_GL000251v2_alt	1311406	1314694	chr6_GL000251v2_alt:1311406-1314694	1	+	1311406	1313944	0	5	73,270,117,33,365,	0,202,1971,2533,2923,
#Deleted in new
chr6_GL000251v2_alt	1311406	1314694	chr6_GL000251v2_alt:1311406-1314694	1	+	1311406	1313944	789624	6	73,270,276,117,33,365,	0,202,1573,1971,2533,2923,
#Deleted in new
chr6_GL000251v2_alt	1311406	1314694	chr6_GL000251v2_alt:1311406-1314694	0	+	1311406	1311406	8553170	6	73,270,276,515,33,365,	0,202,698,1573,2533,2923,
#Deleted in new
chr6_GL000251v2_alt	1311406	1314694	chr6_GL000251v2_alt:1311406-1314694	0	+	1311406	1313944	789624	7	73,270,276,117,33,48,365,	0,202,1573,1971,2533,2708,2923,
#Deleted in new
chr6_GL000251v2_alt	1339419	1339569	chr6_GL000251v2_alt:1339419-1339569	7	-	1339419	1339419	16724991	1	150,	0,
#Deleted in new
chr6_GL000251v2_alt	1368708	1369675	chr6_GL000251v2_alt:1368708-1369675	7	-	1368708	1368708	16724991	1	967,	0,
#Deleted in new
chr6_GL000251v2_alt	1369021	1489345	chr6_GL000251v2_alt:1369021-1489345	3	+	1369164	1488534	789624	11	216,16,14,240,276,276,33,84,93,35,281,	0,340,39005,53187,53668,54523,68204,118981,119508,119957,120043,
#Deleted in new
chr6_GL000251v2_alt	1369164	1371887	chr6_GL000251v2_alt:1369164-1371887	7	+	1369164	1369164	16724991	7	73,270,276,275,117,33,44,	0,197,709,1570,1947,2504,2679,
#Deleted in new
chr6_GL000251v2_alt	1377960	1379092	chr6_GL000251v2_alt:1377960-1379092	7	+	1377960	1377960	16724991	4	272,102,37,39,	0,397,908,1093,
#Deleted in new
chr6_GL000251v2_alt	1387925	1388292	chr6_GL000251v2_alt:1387925-1388292	7	+	1387925	1387925	16724991	2	135,57,	0,310,
#Deleted in new
chr6_GL000251v2_alt	1389164	1390029	chr6_GL000251v2_alt:1389164-1390029	7	-	1389164	1389164	16724991	2	161,169,	0,696,
#Deleted in new
chr6_GL000251v2_alt	1407335	1408326	chr6_GL000251v2_alt:1407335-1408326	7	-	1407335	1407335	16724991	1	991,	0,
#Deleted in new
chr6_GL000251v2_alt	1407809	1410587	chr6_GL000251v2_alt:1407809-1410587	7	+	1407809	1407809	16724991	6	72,261,275,265,117,47,	0,201,719,1604,1998,2731,
#Deleted in new
chr6_GL000251v2_alt	1407811	1488754	chr6_GL000251v2_alt:1407811-1488754	1	+	1407811	1488754	789624	8	70,270,276,276,50,80,29,50,	0,14367,14878,15733,16111,80199,80722,80893,
#Deleted in new
chr6_GL000251v2_alt	1413697	1413883	chr6_GL000251v2_alt:1413697-1413883	7	+	1413697	1413697	16724991	1	186,	0,
#Deleted in new
chr6_GL000251v2_alt	1420684	1425307	chr6_GL000251v2_alt:1420684-1425307	1	+	1421975	1424878	0	10	60,128,223,270,276,276,117,33,48,434,	0,706,1141,1494,2005,2860,3238,3797,3972,4189,
#Deleted in new
chr6_GL000251v2_alt	1421496	1422489	chr6_GL000251v2_alt:1421496-1422489	7	-	1421496	1421496	16724991	1	993,	0,
#Deleted in new
chr6_GL000251v2_alt	1421666	1425307	chr6_GL000251v2_alt:1421666-1425307	1	+	1421975	1424878	789624	8	382,270,276,276,135,33,48,434,	0,512,1023,1878,2256,2815,2990,3207,
#Deleted in new
chr6_GL000251v2_alt	1421891	1425307	chr6_GL000251v2_alt:1421891-1425307	1	+	1421975	1424878	0	8	157,270,276,276,117,33,48,434,	0,287,798,1653,2031,2590,2765,2982,
#Deleted in new
chr6_GL000251v2_alt	1421969	1425307	chr6_GL000251v2_alt:1421969-1425307	0	+	1421969	1421969	8553170	7	79,98,259,276,592,48,434,	0,209,737,1575,1953,2687,2904,
#Deleted in new
chr6_GL000251v2_alt	1421970	1425307	chr6_GL000251v2_alt:1421970-1425307	1	+	1421975	1424878	789624	5	78,270,276,276,434,	0,208,719,1574,2903,
#Deleted in new
chr6_GL000251v2_alt	1421973	1425307	chr6_GL000251v2_alt:1421973-1425307	0	+	1421973	1421973	8553170	7	75,787,276,117,29,48,434,	0,205,1571,1949,2512,2683,2900,
#Deleted in new
chr6_GL000251v2_alt	1421975	1424704	chr6_GL000251v2_alt:1421975-1424704	0	+	1421975	1421975	8553170	6	73,787,276,117,33,48,	0,203,1569,1947,2506,2681,
#Deleted in new
chr6_GL000251v2_alt	1421975	1424704	chr6_GL000251v2_alt:1421975-1424704	0	+	1421975	1421975	8553170	6	73,787,276,135,33,48,	0,203,1569,1947,2506,2681,
#Deleted in new
chr6_GL000251v2_alt	1421975	1429033	chr6_GL000251v2_alt:1421975-1429033	1	+	1421975	1424796	789624	7	73,270,276,276,117,33,4377,	0,203,714,1569,1947,2506,2681,
#Deleted in new
chr6_GL000251v2_alt	1435983	1437958	chr6_GL000251v2_alt:1435983-1437958	7	+	1435983	1435983	16724991	5	261,274,153,37,46,	0,843,1244,1743,1929,
#Deleted in new
chr6_GL000251v2_alt	1450189	1451852	chr6_GL000251v2_alt:1450189-1451852	7	-	1450189	1450189	16724991	3	276,281,256,	0,886,1407,
#Deleted in new
chr6_GL000251v2_alt	1454488	1457785	chr6_GL000251v2_alt:1454488-1457785	3	+	1454488	1454488	789624	3	403,64,193,	0,2540,3104,
#Deleted in new
chr6_GL000251v2_alt	1472596	1472993	chr6_GL000251v2_alt:1472596-1472993	7	+	1472596	1472596	16724991	2	123,135,	0,262,
#Deleted in new
chr6_GL000251v2_alt	1473824	1474702	chr6_GL000251v2_alt:1473824-1474702	7	-	1473824	1473824	16724991	2	165,170,	0,708,
#Deleted in new
chr6_GL000251v2_alt	1480398	1540705	chr6_GL000251v2_alt:1480398-1540705	0	-	1480398	1480398	8553170	3	1722,76,188,	0,57493,60119,
#Deleted in new
chr6_GL000251v2_alt	1480398	1540921	chr6_GL000251v2_alt:1480398-1540921	0	-	1480398	1480398	8553170	12	1722,202,174,119,43,279,106,95,203,68,76,183,	0,2157,6209,6510,7618,7879,8712,20671,34244,35252,57493,60340,
#Deleted in new
chr6_GL000251v2_alt	1480398	1540920	chr6_GL000251v2_alt:1480398-1540920	0	-	1480398	1480398	8553170	4	1722,95,76,403,	0,20671,57493,60119,
#Deleted in new
chr6_GL000251v2_alt	1480398	1540961	chr6_GL000251v2_alt:1480398-1540961	0	-	1480398	1480398	789624	6	1722,203,68,76,255,106,	0,34244,35252,57493,60119,60457,
#Deleted in new
chr6_GL000251v2_alt	1485505	1486509	chr6_GL000251v2_alt:1485505-1486509	7	-	1485505	1485505	16724991	1	1004,	0,
#Deleted in new
chr6_GL000251v2_alt	1485967	1489341	chr6_GL000251v2_alt:1485967-1489341	7	+	1485967	1485967	16724991	6	87,270,274,140,48,422,	0,217,1606,2455,2737,2952,
#Deleted in new
chr6_GL000251v2_alt	1485971	1489341	chr6_GL000251v2_alt:1485971-1489341	5	+	1485971	1485971	16724991	6	83,270,274,117,140,422,	0,213,1602,1998,2451,2948,
#Deleted in new
chr6_GL000251v2_alt	1485980	1489341	chr6_GL000251v2_alt:1485980-1489341	5	+	1485980	1485980	16724991	5	74,274,140,48,422,	0,1593,2442,2724,2939,
#Deleted in new
chr6_GL000251v2_alt	1485990	1488924	chr6_GL000251v2_alt:1485990-1488924	5	+	1485990	1485990	16724991	8	64,270,276,274,117,33,48,5,	0,194,712,1583,1979,2539,2714,2929,
#Deleted in new
chr6_GL000251v2_alt	1491483	1514750	chr6_GL000251v2_alt:1491483-1514750	3	-	1491483	1491483	8553170	2	9681,108,	0,23159,
#Deleted in new
chr6_GL000251v2_alt	1499172	1541417	chr6_GL000251v2_alt:1499172-1541417	0	-	1499172	1499172	8553170	6	155,95,203,68,76,900,	0,1897,15470,16478,38719,41345,
#Deleted in new
chr6_GL000251v2_alt	1511447	1512738	chr6_GL000251v2_alt:1511447-1512738	7	+	1511447	1511447	16724991	2	436,548,	0,743,
#Deleted in new
chr6_GL000251v2_alt	1514669	1538524	chr6_GL000251v2_alt:1514669-1538524	0	-	1514669	1514669	8553170	4	176,68,76,380,	0,981,23222,23475,
#Deleted in new
chr6_GL000251v2_alt	1515164	1540966	chr6_GL000251v2_alt:1515164-1540966	0	-	1515164	1515164	8553170	4	554,627,76,449,	0,21703,22727,25353,
#Deleted in new
chr6_GL000251v2_alt	1515650	1515718	chr6_GL000251v2_alt:1515650-1515718	3	+	1515650	1515650	8553170	1	68,	0,
#Deleted in new
chr6_GL000251v2_alt	1534377	1540956	chr6_GL000251v2_alt:1534377-1540956	0	-	1534377	1534377	8553170	3	3117,76,101,	0,3514,6478,
#Deleted in new
chr6_GL000251v2_alt	1536529	1540756	chr6_GL000251v2_alt:1536529-1540756	0	-	1536529	1536529	8553170	3	965,76,2612,	0,1362,1615,
#Deleted in new
chr6_GL000251v2_alt	1537891	1537967	chr6_GL000251v2_alt:1537891-1537967	3	+	1537891	1537891	8553170	1	76,	0,
#Deleted in new
chr6_GL000251v2_alt	1538675	1544680	chr6_GL000251v2_alt:1538675-1544680	0	+	1538675	1538675	8553170	2	3435,237,	0,5768,
#Deleted in new
chr6_GL000251v2_alt	1540856	1540960	chr6_GL000251v2_alt:1540856-1540960	3	+	1540856	1540856	8553170	1	104,	0,
#Deleted in new
chr6_GL000251v2_alt	1541030	1544680	chr6_GL000251v2_alt:1541030-1544680	3	+	1541301	1544468	789624	4	416,101,110,237,	0,663,970,3413,
#Deleted in new
chr6_GL000251v2_alt	1541033	1544680	chr6_GL000251v2_alt:1541033-1544680	1	+	1541301	1544468	789624	5	133,155,101,110,237,	0,258,660,967,3410,
#Deleted in new
chr6_GL000251v2_alt	1541035	1544680	chr6_GL000251v2_alt:1541035-1544680	1	+	1541301	1544468	789624	5	140,155,101,110,237,	0,256,658,965,3408,
#Deleted in new
chr6_GL000251v2_alt	1541039	1544680	chr6_GL000251v2_alt:1541039-1544680	1	+	1541301	1544468	789624	5	151,155,101,110,237,	0,252,654,961,3404,
#Deleted in new
chr6_GL000251v2_alt	1541106	1544680	chr6_GL000251v2_alt:1541106-1544680	0	+	1541106	1541106	789624	4	69,155,110,237,	0,185,894,3337,
#Deleted in new
chr6_GL000251v2_alt	1546479	1550104	chr6_GL000251v2_alt:1546479-1550104	3	+	1548447	1549077	789624	3	301,109,1230,	0,1881,2395,
#Deleted in new
chr6_GL000251v2_alt	1546858	1550104	chr6_GL000251v2_alt:1546858-1550104	1	+	1547181	1549077	789624	3	392,109,1230,	0,1502,2016,
#Deleted in new
chr6_GL000251v2_alt	1546975	1550104	chr6_GL000251v2_alt:1546975-1550104	1	+	1548447	1549077	789624	4	275,75,109,1230,	0,1074,1385,1899,
#Deleted in new
chr6_GL000251v2_alt	1547313	1550104	chr6_GL000251v2_alt:1547313-1550104	1	+	1548447	1549077	789624	4	122,75,109,1230,	0,736,1047,1561,
#Deleted in new
chr6_GL000251v2_alt	1547346	1550104	chr6_GL000251v2_alt:1547346-1550104	1	+	1548447	1549077	789624	4	50,75,109,1230,	0,703,1014,1528,
#Deleted in new
chr6_GL000251v2_alt	1547976	1550104	chr6_GL000251v2_alt:1547976-1550104	1	+	1548447	1549077	789624	2	493,1230,	0,898,
#Deleted in new
chr6_GL000251v2_alt	1550036	1555658	chr6_GL000251v2_alt:1550036-1555658	1	-	1550881	1555560	789624	4	1426,92,23,665,	0,2891,3190,4957,
#Deleted in new
chr6_GL000251v2_alt	1550036	1555620	chr6_GL000251v2_alt:1550036-1555620	3	-	1550881	1555560	789624	5	935,293,92,23,627,	0,1133,2891,3190,4957,
#Deleted in new
chr6_GL000251v2_alt	1582689	1592905	chr6_GL000251v2_alt:1582689-1592905	3	-	1583328	1592608	789624	9	893,66,75,116,23,231,96,500,43,	0,1205,2271,5157,6125,7550,8761,9502,10173,
#Deleted in new
chr6_GL000251v2_alt	1582689	1585450	chr6_GL000251v2_alt:1582689-1585450	0	-	1582689	1582689	8553170	4	349,318,66,490,	0,575,1205,2271,
#Deleted in new
chr6_GL000251v2_alt	1582689	1592693	chr6_GL000251v2_alt:1582689-1592693	0	-	1582689	1582689	789624	7	893,66,75,72,231,96,502,	0,1205,2271,5157,7550,8761,9502,
#Deleted in new
chr6_GL000251v2_alt	1583154	1590313	chr6_GL000251v2_alt:1583154-1590313	0	-	1583154	1583154	8553170	6	428,66,75,72,23,74,	0,740,1806,4692,5660,7085,
#Deleted in new
chr6_GL000251v2_alt	1583665	1587993	chr6_GL000251v2_alt:1583665-1587993	0	-	1583665	1583665	8553170	3	295,75,147,	0,1295,4181,
#Deleted in new
chr6_GL000251v2_alt	1583723	1585233	chr6_GL000251v2_alt:1583723-1585233	0	-	1583723	1583723	8553170	2	237,273,	0,1237,
#Deleted in new
chr6_GL000251v2_alt	1584988	1591989	chr6_GL000251v2_alt:1584988-1591989	0	-	1584988	1584988	8553170	6	47,116,23,231,96,107,	0,2858,3826,5251,6462,6894,
#Deleted in new
chr6_GL000251v2_alt	1585032	1594523	chr6_GL000251v2_alt:1585032-1594523	3	+	1585032	1585032	789624	4	148,125,122,154,	0,2424,6488,9337,
#Deleted in new
chr6_GL000251v2_alt	1588534	1591509	chr6_GL000251v2_alt:1588534-1591509	0	-	1588534	1588534	8553170	3	303,231,59,	0,1705,2916,
#Deleted in new
chr6_GL000251v2_alt	1591020	1592278	chr6_GL000251v2_alt:1591020-1592278	0	-	1591020	1591020	8553170	2	526,87,	0,1171,
#Deleted in new
chr6_GL000251v2_alt	1612610	1612770	chr6_GL000251v2_alt:1612610-1612770	3	-	1612610	1612610	8553170	1	160,	0,
#Deleted in new
chr6_GL000251v2_alt	1615912	1628543	chr6_GL000251v2_alt:1615912-1628543	3	+	1616841	1627620	789624	6	82,649,96,225,23,1011,	0,625,9889,10880,11415,11620,
#Deleted in new
chr6_GL000251v2_alt	1615928	1617003	chr6_GL000251v2_alt:1615928-1617003	0	+	1615928	1615928	8553170	2	475,466,	0,609,
#Deleted in new
chr6_GL000251v2_alt	1616535	1628543	chr6_GL000251v2_alt:1616535-1628543	1	+	1616841	1627620	789624	5	651,96,225,23,1011,	0,9266,10257,10792,10997,
#Deleted in new
chr6_GL000251v2_alt	1616814	1628543	chr6_GL000251v2_alt:1616814-1628543	1	+	1616841	1627620	789624	5	372,96,138,23,1011,	0,8987,10065,10513,10718,
#Deleted in new
chr6_GL000251v2_alt	1631752	1640740	chr6_GL000251v2_alt:1631752-1640740	1	-	1633495	1640664	789624	8	1827,176,33,116,23,231,96,505,	0,2366,3782,4994,5424,6452,7203,8483,
#Deleted in new
chr6_GL000251v2_alt	1631752	1640740	chr6_GL000251v2_alt:1631752-1640740	3	-	1633776	1640664	789624	7	2542,33,116,23,231,96,505,	0,3782,4994,5424,6452,7203,8483,
#Deleted in new
chr6_GL000251v2_alt	1643003	1652487	chr6_GL000251v2_alt:1643003-1652487	3	+	1643689	1652147	789624	8	860,96,231,9,14,116,33,858,	0,3970,5094,6035,6633,7295,7770,8626,
#Deleted in new
chr6_GL000251v2_alt	1643013	1652494	chr6_GL000251v2_alt:1643013-1652494	1	+	1643482	1652147	789624	7	850,96,231,23,116,33,865,	0,3960,5084,6025,7285,7760,8616,
#Deleted in new
chr6_GL000251v2_alt	1648110	1651753	chr6_GL000251v2_alt:1648110-1651753	0	+	1648110	1651753	789624	5	218,23,116,33,101,	0,928,2188,2663,3542,
#Deleted in new
chr6_GL000251v2_alt	1648154	1652494	chr6_GL000251v2_alt:1648154-1652494	0	+	1648154	1648154	8553170	6	174,23,116,33,65,124,	0,884,2144,2619,3475,4216,
#Deleted in new
chr6_GL000251v2_alt	1650110	1650895	chr6_GL000251v2_alt:1650110-1650895	0	+	1650110	1650110	8553170	2	304,122,	0,663,
#Deleted in new
chr6_GL000251v2_alt	1664234	1693198	chr6_GL000251v2_alt:1664234-1693198	3	-	1665655	1678875	789624	9	2104,33,116,23,231,96,488,104,123,	0,4716,4967,5563,12053,13966,14203,16570,28841,
#Deleted in new
chr6_GL000251v2_alt	1664234	1684533	chr6_GL000251v2_alt:1664234-1684533	1	-	1665655	1678875	789624	9	2104,33,116,23,231,96,488,49,110,	0,4716,4967,5563,12053,13966,14203,16570,20189,
#Deleted in new
chr6_GL000251v2_alt	1664234	1693137	chr6_GL000251v2_alt:1664234-1693137	1	-	1665655	1678875	789624	10	2104,33,116,23,231,96,599,104,110,62,	0,4716,4967,5563,12053,13966,14203,16570,20189,28841,
#Deleted in new
chr6_GL000251v2_alt	1664234	1670179	chr6_GL000251v2_alt:1664234-1670179	0	-	1664234	1664234	8553170	3	2104,33,978,	0,4716,4967,
#Deleted in new
chr6_GL000251v2_alt	1666577	1668398	chr6_GL000251v2_alt:1666577-1668398	7	-	1666577	1666577	16724991	2	840,363,	0,1458,
#Deleted in new
chr6_GL000251v2_alt	1676307	1693190	chr6_GL000251v2_alt:1676307-1693190	0	-	1676307	1678875	789624	6	211,96,488,104,110,115,	0,1893,2130,4497,8116,16768,
#Deleted in new
chr6_GL000251v2_alt	1676350	1684489	chr6_GL000251v2_alt:1676350-1684489	0	-	1676350	1678875	789624	5	168,96,263,89,66,	0,1850,2312,4454,8073,
#Deleted in new
chr6_GL000251v2_alt	1678262	1693156	chr6_GL000251v2_alt:1678262-1693156	0	-	1678262	1678875	789624	3	34,488,81,	0,175,14813,
#Deleted in new
chr6_GL000251v2_alt	1678509	1693137	chr6_GL000251v2_alt:1678509-1693137	0	-	1678509	1678875	789624	3	410,110,62,	0,5914,14566,
#Deleted in new
chr6_GL000251v2_alt	1678535	1693136	chr6_GL000251v2_alt:1678535-1693136	0	-	1678535	1678535	8553170	4	227,104,110,61,	0,2269,5888,14540,
#Deleted in new
chr6_GL000251v2_alt	1713804	1714243	chr6_GL000251v2_alt:1713804-1714243	0	-	1713804	1713804	8553170	2	230,120,	0,319,
#Deleted in new
chr6_GL000251v2_alt	1713804	1805811	chr6_GL000251v2_alt:1713804-1805811	3	-	1713804	1713804	789624	5	230,93,165,118,126,	0,319,8106,20306,91881,
#Deleted in new
chr6_GL000251v2_alt	1718053	1722043	chr6_GL000251v2_alt:1718053-1722043	7	+	1718053	1718053	16724991	3	420,96,252,	0,3386,3738,
#Deleted in new
chr6_GL000251v2_alt	1739363	1746646	chr6_GL000251v2_alt:1739363-1746646	7	+	1739363	1739363	16724991	7	101,158,211,276,117,48,3676,	0,330,800,1607,1990,2698,3607,
#Deleted in new
chr6_GL000251v2_alt	1739381	1742102	chr6_GL000251v2_alt:1739381-1742102	5	+	1739381	1739381	16724991	6	83,270,286,276,117,41,	0,200,707,1589,1972,2680,
#Deleted in new
chr6_GL000251v2_alt	1770487	1806064	chr6_GL000251v2_alt:1770487-1806064	0	-	1770487	1770487	8553170	4	1806,494,106,34,	0,3677,5338,35543,
#Deleted in new
chr6_GL000251v2_alt	1770699	1806053	chr6_GL000251v2_alt:1770699-1806053	0	-	1770699	1770699	8553170	3	3959,106,368,	0,5126,34986,
#Deleted in new
chr6_GL000251v2_alt	1770699	1806827	chr6_GL000251v2_alt:1770699-1806827	3	-	1770699	1770699	789624	3	3959,106,797,	0,5126,35331,
#Deleted in new
chr6_GL000251v2_alt	1770699	1806011	chr6_GL000251v2_alt:1770699-1806011	0	-	1770699	1770699	8553170	4	3959,106,214,326,	0,5126,23243,34986,
#Deleted in new
chr6_GL000251v2_alt	1770699	1806574	chr6_GL000251v2_alt:1770699-1806574	0	-	1770699	1770699	8553170	4	3959,106,214,38,	0,5126,23243,35837,
#Deleted in new
chr6_GL000251v2_alt	1770699	1806528	chr6_GL000251v2_alt:1770699-1806528	0	-	1770699	1770699	789624	5	1594,494,106,214,498,	0,3465,5126,23243,35331,
#Deleted in new
chr6_GL000251v2_alt	1770699	1806063	chr6_GL000251v2_alt:1770699-1806063	0	-	1770699	1770699	8553170	4	1594,494,106,236,	0,3465,5126,35128,
#Deleted in new
chr6_GL000251v2_alt	1770699	1806024	chr6_GL000251v2_alt:1770699-1806024	0	-	1770699	1770699	8553170	3	3959,106,197,	0,5126,35128,
#Deleted in new
chr6_GL000251v2_alt	1806155	1809429	chr6_GL000251v2_alt:1806155-1809429	0	+	1808995	1809429	789624	3	409,153,441,	0,2411,2833,
#Deleted in new
chr6_GL000251v2_alt	1806511	1809217	chr6_GL000251v2_alt:1806511-1809217	0	+	1808995	1809217	789624	4	161,45,153,229,	0,817,2055,2477,
#Deleted in new
chr6_GL000251v2_alt	1806520	1823410	chr6_GL000251v2_alt:1806520-1823410	1	+	1808995	1821940	0	8	152,153,460,96,231,23,116,2018,	0,2046,2468,3938,8907,13068,13665,14872,
#Deleted in new
chr6_GL000251v2_alt	1806520	1823409	chr6_GL000251v2_alt:1806520-1823409	3	+	1808995	1821940	0	9	152,153,460,96,231,23,90,116,2017,	0,2046,2468,3938,8907,13068,13432,13665,14872,
#Deleted in new
chr6_GL000251v2_alt	1806581	1815660	chr6_GL000251v2_alt:1806581-1815660	0	+	1808995	1815660	789624	5	91,133,460,96,233,	0,2005,2407,3877,8846,
#Deleted in new
chr6_GL000251v2_alt	1806596	1823410	chr6_GL000251v2_alt:1806596-1823410	1	+	1808995	1821940	0	9	76,45,133,460,96,231,23,116,2018,	0,732,1990,2392,3862,8831,12992,13589,14796,
#Deleted in new
chr6_GL000251v2_alt	1806633	1809173	chr6_GL000251v2_alt:1806633-1809173	0	+	1808995	1809173	789624	4	39,50,153,185,	0,690,1933,2355,
#Deleted in new
chr6_GL000251v2_alt	1806935	1823410	chr6_GL000251v2_alt:1806935-1823410	1	+	1808995	1821940	0	8	438,153,460,96,231,23,116,2018,	0,1631,2053,3523,8492,12653,13250,14457,
#Deleted in new
chr6_GL000251v2_alt	1807199	1809140	chr6_GL000251v2_alt:1807199-1809140	0	+	1808995	1809140	789624	3	174,133,152,	0,1387,1789,
#Deleted in new
chr6_GL000251v2_alt	1808566	1823410	chr6_GL000251v2_alt:1808566-1823410	1	+	1808995	1821940	0	8	153,460,96,231,23,90,116,2018,	0,422,1892,6861,11022,11386,11619,12826,
#Deleted in new
chr6_GL000251v2_alt	1808988	1826539	chr6_GL000251v2_alt:1808988-1826539	3	+	1808995	1826491	789624	10	460,96,231,23,116,185,101,83,126,146,	0,1470,6439,10600,11197,12404,15990,16183,17124,17405,
#Deleted in new
chr6_GL000251v2_alt	1809206	1821151	chr6_GL000251v2_alt:1809206-1821151	0	+	1809206	1821126	789624	6	242,96,231,23,34,82,	0,1252,6221,10382,10979,11863,
#Deleted in new
chr6_GL000251v2_alt	1824811	1826538	chr6_GL000251v2_alt:1824811-1826538	1	+	1824852	1826491	789624	5	98,101,107,126,145,	0,167,336,1301,1582,
#Deleted in new
chr6_GL000251v2_alt	1824814	1826174	chr6_GL000251v2_alt:1824814-1826174	0	+	1824814	1824814	8553170	4	95,101,439,62,	0,164,357,1298,
#Deleted in new
chr6_GL000251v2_alt	1824822	1826538	chr6_GL000251v2_alt:1824822-1826538	0	+	1824822	1824822	8553170	3	87,1260,145,	0,156,1571,
#Deleted in new
chr6_GL000251v2_alt	1824831	1826538	chr6_GL000251v2_alt:1824831-1826538	0	+	1824831	1824831	8553170	4	78,101,126,145,	0,147,1281,1562,
#Deleted in new
chr6_GL000251v2_alt	1824833	1826565	chr6_GL000251v2_alt:1824833-1826565	0	+	1824833	1824833	8553170	4	76,83,126,172,	0,338,1279,1560,
#Deleted in new
chr6_GL000251v2_alt	1824835	1826538	chr6_GL000251v2_alt:1824835-1826538	0	+	1824835	1824835	8553170	4	74,276,126,145,	0,143,1277,1558,
#Deleted in new
chr6_GL000251v2_alt	1824839	1826538	chr6_GL000251v2_alt:1824839-1826538	1	+	1824852	1826491	789624	4	240,83,126,145,	0,332,1273,1554,
#Deleted in new
chr6_GL000251v2_alt	1824839	1826538	chr6_GL000251v2_alt:1824839-1826538	1	+	1824852	1826491	789624	5	70,101,83,126,145,	0,139,332,1273,1554,
#Deleted in new
chr6_GL000251v2_alt	1824849	1826538	chr6_GL000251v2_alt:1824849-1826538	1	+	1824852	1826454	789624	5	60,101,83,133,145,	0,129,322,1263,1544,
#Deleted in new
chr6_GL000251v2_alt	1831096	1831231	chr6_GL000251v2_alt:1831096-1831231	7	+	1831096	1831096	16724991	1	135,	0,
#Deleted in new
chr6_GL000251v2_alt	1838957	1839591	chr6_GL000251v2_alt:1838957-1839591	7	-	1838957	1838957	16724991	1	634,	0,
#Deleted in new
chr6_GL000251v2_alt	1842801	1843970	chr6_GL000251v2_alt:1842801-1843970	7	-	1842801	1842801	16724991	1	1169,	0,
#Deleted in new
chr6_GL000251v2_alt	1894397	1899003	chr6_GL000251v2_alt:1894397-1899003	7	+	1894397	1894397	16724991	5	251,286,271,131,116,	0,517,1404,1791,4490,
#Deleted in new
chr6_GL000251v2_alt	1946251	1947779	chr6_GL000251v2_alt:1946251-1947779	7	+	1946251	1946251	16724991	2	414,853,	0,675,
#Deleted in new
chr6_GL000251v2_alt	1948619	1949989	chr6_GL000251v2_alt:1948619-1949989	7	+	1948619	1948619	16724991	1	1370,	0,
#Deleted in new
chr6_GL000251v2_alt	1965675	1966326	chr6_GL000251v2_alt:1965675-1966326	7	+	1965675	1965675	16724991	1	651,	0,
#Deleted in new
chr6_GL000251v2_alt	1969201	1973940	chr6_GL000251v2_alt:1969201-1973940	3	+	1969266	1972316	0	8	129,270,276,276,117,33,43,1457,	0,259,773,1670,2070,2937,3074,3282,
#Deleted in new
chr6_GL000251v2_alt	1969244	1970100	chr6_GL000251v2_alt:1969244-1970100	0	+	1969244	1969244	8553170	2	86,640,	0,216,
#Deleted in new
chr6_GL000251v2_alt	1969246	1971018	chr6_GL000251v2_alt:1969246-1971018	0	+	1969246	1969246	8553170	3	484,276,147,	0,728,1625,
#Deleted in new
chr6_GL000251v2_alt	1995988	1998943	chr6_GL000251v2_alt:1995988-1998943	3	+	1995988	1995988	8553170	2	346,505,	0,2450,
#Deleted in new
chr6_GL000251v2_alt	2021095	2036894	chr6_GL000251v2_alt:2021095-2036894	3	-	2025790	2035923	789624	12	4937,141,163,179,195,96,208,72,152,137,166,1044,	0,5319,5735,5975,11091,11708,11974,13199,13388,13679,14179,14755,
#Deleted in new
chr6_GL000251v2_alt	2026203	2032266	chr6_GL000251v2_alt:2026203-2032266	0	-	2026203	2026203	8553170	4	352,163,179,80,	0,627,867,5983,
#Deleted in new
chr6_GL000251v2_alt	2026914	2027536	chr6_GL000251v2_alt:2026914-2027536	0	-	2026914	2026914	8553170	2	79,466,	0,156,
#Deleted in new
chr6_GL000251v2_alt	2031896	2032840	chr6_GL000251v2_alt:2031896-2032840	0	-	2031896	2031896	8553170	2	485,37,	0,907,
#Deleted in new
chr6_GL000251v2_alt	2033079	2035808	chr6_GL000251v2_alt:2033079-2035808	0	-	2033079	2035507	789624	5	198,72,152,137,534,	0,1215,1404,1695,2195,
#Deleted in new
chr6_GL000251v2_alt	2036605	2043443	chr6_GL000251v2_alt:2036605-2043443	3	+	2037064	2042215	789624	4	565,63,291,1335,	0,1264,4948,5503,
#Deleted in new
chr6_GL000251v2_alt	2036999	2043443	chr6_GL000251v2_alt:2036999-2043443	1	+	2037064	2042215	789624	3	171,291,1335,	0,4554,5109,
#Deleted in new
chr6_GL000251v2_alt	2037033	2043443	chr6_GL000251v2_alt:2037033-2043443	0	+	2037033	2037033	8553170	4	137,181,291,1335,	0,4014,4520,5075,
#Deleted in new
chr6_GL000251v2_alt	2037035	2043443	chr6_GL000251v2_alt:2037035-2043443	0	+	2037035	2037035	8553170	5	135,63,181,291,1335,	0,834,4012,4518,5073,
#Deleted in new
chr6_GL000251v2_alt	2037066	2038156	chr6_GL000251v2_alt:2037066-2038156	0	+	2037066	2037066	8553170	2	104,287,	0,803,
#Deleted in new
chr6_GL000251v2_alt	2039750	2043443	chr6_GL000251v2_alt:2039750-2043443	0	+	2039750	2039750	8553170	2	2094,1335,	0,2358,
#Deleted in new
chr6_GL000251v2_alt	2051097	2071149	chr6_GL000251v2_alt:2051097-2071149	1	+	2051209	2070418	789624	25	185,47,96,127,38,108,75,114,114,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,898,	0,6034,6443,6701,6973,7095,8557,9031,11020,11692,12234,12431,12818,13044,13886,14184,14505,14760,15100,15267,18307,18425,18768,18925,19154,
#Deleted in new
chr6_GL000251v2_alt	2051114	2071149	chr6_GL000251v2_alt:2051114-2071149	3	+	2051209	2070418	789624	24	168,47,96,127,38,108,75,114,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,898,	0,6017,6426,6684,6956,7078,8540,9014,11675,12217,12414,12801,13027,13869,14167,14488,14743,15083,15250,18290,18408,18751,18908,19137,
#Deleted in new
chr6_GL000251v2_alt	2051154	2063432	chr6_GL000251v2_alt:2051154-2063432	0	+	2051209	2063432	789624	11	128,47,96,130,38,108,75,114,114,123,101,	0,5977,6386,6641,6916,7038,8500,8974,10963,11635,12177,
#Deleted in new
chr6_GL000251v2_alt	2051163	2060171	chr6_GL000251v2_alt:2051163-2060171	0	+	2051163	2051163	8553170	7	119,96,127,38,108,75,43,	0,6377,6635,6907,7029,8491,8965,
#Deleted in new
chr6_GL000251v2_alt	2051173	2071149	chr6_GL000251v2_alt:2051173-2071149	1	+	2051209	2070418	789624	8	109,47,96,99,97,65,73,898,	0,5958,6367,6625,18421,18692,18849,19078,
#Deleted in new
chr6_GL000251v2_alt	2062188	2076903	chr6_GL000251v2_alt:2062188-2076903	0	+	2062188	2062188	8553170	18	43,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,628,612,	0,601,1143,1340,1727,1953,2795,3093,3414,3669,4009,4176,7216,7334,7677,7834,8063,14103,
#Deleted in new
chr6_GL000251v2_alt	2069145	2070461	chr6_GL000251v2_alt:2069145-2070461	0	+	2069145	2069145	8553170	4	546,65,73,210,	0,720,877,1106,
#Deleted in new
chr6_GL000251v2_alt	2080123	2096968	chr6_GL000251v2_alt:2080123-2096968	3	-	2081272	2089668	789624	20	1259,756,114,76,195,64,247,159,148,101,113,106,174,78,52,136,87,118,521,21,	0,1536,2446,2810,3072,3380,3608,3953,4188,4594,5523,5738,6068,6379,7440,8379,8677,9438,16078,16824,
#Deleted in new
chr6_GL000251v2_alt	2083296	2083936	chr6_GL000251v2_alt:2083296-2083936	0	-	2083296	2083296	8553170	2	271,205,	0,435,
#Deleted in new
chr6_GL000251v2_alt	2084335	2085722	chr6_GL000251v2_alt:2084335-2085722	0	-	2084335	2084335	8553170	2	483,76,	0,1311,
#Deleted in new
chr6_GL000251v2_alt	2084741	2086461	chr6_GL000251v2_alt:2084741-2086461	0	-	2084741	2084741	8553170	4	77,113,106,270,	0,905,1120,1450,
#Deleted in new
chr6_GL000251v2_alt	2085532	2085967	chr6_GL000251v2_alt:2085532-2085967	0	-	2085532	2085532	8553170	2	227,106,	0,329,
#Deleted in new
chr6_GL000251v2_alt	2089670	2096968	chr6_GL000251v2_alt:2089670-2096968	0	-	2089670	2089670	8553170	4	9,54,521,21,	0,4602,6531,7277,
#Deleted in new
chr6_GL000251v2_alt	2096307	2098336	chr6_GL000251v2_alt:2096307-2098336	0	-	2096307	2096307	8553170	2	415,55,	0,1974,
#Deleted in new
chr6_GL000251v2_alt	2097432	2106119	chr6_GL000251v2_alt:2097432-2106119	3	+	2097589	2105521	0	7	235,109,98,69,67,60,894,	0,1784,2000,2212,5123,7174,7793,
#Deleted in new
chr6_GL000251v2_alt	2097566	2099848	chr6_GL000251v2_alt:2097566-2099848	0	+	2097566	2097566	8553170	4	101,109,98,204,	0,1650,1866,2078,
#Deleted in new
chr6_GL000251v2_alt	2097575	2106119	chr6_GL000251v2_alt:2097575-2106119	0	+	2097575	2097575	8553170	5	92,497,67,60,894,	0,1641,4980,7031,7650,
#Deleted in new
chr6_GL000251v2_alt	2097583	2106119	chr6_GL000251v2_alt:2097583-2106119	1	+	2097589	2105521	789624	5	84,109,98,67,894,	0,1633,1849,4972,7642,
#Deleted in new
chr6_GL000251v2_alt	2097583	2106119	chr6_GL000251v2_alt:2097583-2106119	0	+	2097583	2097583	8553170	7	84,109,126,69,67,60,894,	0,1633,1821,2061,4972,7023,7642,
#Deleted in new
chr6_GL000251v2_alt	2106565	2124401	chr6_GL000251v2_alt:2106565-2124401	1	+	2106609	2122737	0	9	151,61,92,61,114,102,46,72,1912,	0,618,794,1009,1190,1487,13533,15332,15924,
#Deleted in new
chr6_GL000251v2_alt	2106579	2126545	chr6_GL000251v2_alt:2106579-2126545	1	+	2106609	2126365	0	13	137,61,92,61,114,102,46,69,72,244,80,43,355,	0,604,780,995,1176,1473,13519,13677,15318,15910,19037,19209,19611,
#Deleted in new
chr6_GL000251v2_alt	2106598	2124401	chr6_GL000251v2_alt:2106598-2124401	1	+	2106609	2123284	0	10	118,61,92,61,114,102,46,72,244,1151,	0,585,761,976,1157,1454,13500,15299,15891,16652,
#Deleted in new
chr6_GL000251v2_alt	2106599	2124401	chr6_GL000251v2_alt:2106599-2124401	1	+	2106609	2122737	0	10	117,61,92,61,114,102,46,69,72,1912,	0,584,760,975,1156,1453,13499,13657,15298,15890,
#Deleted in new
chr6_GL000251v2_alt	2106609	2126545	chr6_GL000251v2_alt:2106609-2126545	1	+	2106927	2126365	0	13	389,61,92,61,114,102,46,69,72,244,80,43,355,	0,574,750,965,1146,1443,13489,13647,15288,15880,19007,19179,19581,
#Deleted in new
chr6_GL000251v2_alt	2106609	2124401	chr6_GL000251v2_alt:2106609-2124401	1	+	2106609	2123284	0	11	107,61,92,61,114,102,46,69,72,244,1151,	0,574,750,965,1146,1443,13489,13647,15288,15880,16641,
#Deleted in new
chr6_GL000251v2_alt	2106616	2126545	chr6_GL000251v2_alt:2106616-2126545	0	+	2106616	2106616	8553170	12	100,61,92,61,114,102,46,69,72,80,43,355,	0,567,743,958,1139,1436,13482,13640,15281,19000,19172,19574,
#Deleted in new
chr6_GL000251v2_alt	2106638	2120420	chr6_GL000251v2_alt:2106638-2120420	0	+	2106638	2106638	8553170	8	78,61,92,61,114,102,46,164,	0,545,721,936,1117,1414,13460,13618,
#Deleted in new
chr6_GL000251v2_alt	2106643	2126545	chr6_GL000251v2_alt:2106643-2126545	0	+	2106643	2106643	789624	11	73,61,92,61,114,102,46,69,72,80,757,	0,540,716,931,1112,1409,13455,13613,15254,18973,19145,
#Deleted in new
chr6_GL000251v2_alt	2108123	2126124	chr6_GL000251v2_alt:2108123-2126124	2	+	2108123	2108123	8553170	6	31,46,72,80,43,128,	0,11975,13774,17493,17665,17873,
#Deleted in new
chr6_GL000251v2_alt	2113354	2113621	chr6_GL000251v2_alt:2113354-2113621	7	+	2113354	2113354	16724991	1	267,	0,
#Deleted in new
chr6_GL000251v2_alt	2121543	2126545	chr6_GL000251v2_alt:2121543-2126545	0	+	2121543	2121543	8553170	4	49,72,215,355,	0,354,4073,4647,
#Deleted in new
chr6_GL000251v2_alt	2122640	2126545	chr6_GL000251v2_alt:2122640-2126545	0	+	2122640	2122640	8553170	3	93,79,757,	0,2977,3148,
#Deleted in new
chr6_GL000251v2_alt	2126760	2131007	chr6_GL000251v2_alt:2126760-2131007	0	+	2126760	2126760	8553170	4	265,209,89,20,	0,2712,3955,4227,
#Deleted in new
chr6_GL000251v2_alt	2126776	2132823	chr6_GL000251v2_alt:2126776-2132823	0	+	2126776	2126776	8553170	6	249,402,107,201,70,308,	0,2503,3939,4211,5585,5739,
#Deleted in new
chr6_GL000251v2_alt	2126794	2132823	chr6_GL000251v2_alt:2126794-2132823	3	+	2126953	2132629	789624	6	231,402,89,201,70,308,	0,2485,3921,4193,5567,5721,
#Deleted in new
chr6_GL000251v2_alt	2126847	2132427	chr6_GL000251v2_alt:2126847-2132427	0	+	2126847	2126847	8553170	3	178,201,66,	0,4140,5514,
#Deleted in new
chr6_GL000251v2_alt	2126885	2132823	chr6_GL000251v2_alt:2126885-2132823	1	+	2126953	2132629	789624	5	140,89,201,70,308,	0,3830,4102,5476,5630,
#Deleted in new
chr6_GL000251v2_alt	2126907	2129635	chr6_GL000251v2_alt:2126907-2129635	0	+	2126907	2126907	8553170	3	118,241,356,	0,420,2372,
#Deleted in new
chr6_GL000251v2_alt	2127142	2132823	chr6_GL000251v2_alt:2127142-2132823	0	+	2127142	2132629	789624	6	426,402,89,201,70,308,	0,2137,3573,3845,5219,5373,
#Deleted in new
chr6_GL000251v2_alt	2130775	2132823	chr6_GL000251v2_alt:2130775-2132823	0	+	2130775	2130775	8553170	3	29,201,462,	0,212,1586,
#Deleted in new
chr6_GL000251v2_alt	2132832	2152781	chr6_GL000251v2_alt:2132832-2152781	3	-	2132955	2152585	789624	20	252,174,162,163,68,119,163,141,153,99,211,116,111,192,204,255,57,163,239,403,	0,1618,2087,2347,3110,3303,3509,3864,6383,6647,6943,9538,9822,11712,11982,12390,17321,17701,17947,19546,
#Deleted in new
chr6_GL000251v2_alt	2132832	2141727	chr6_GL000251v2_alt:2132832-2141727	1	-	2132955	2141600	789624	12	252,174,162,163,68,119,163,141,153,99,211,228,	0,1618,2087,2347,3110,3303,3509,3864,6383,6647,6943,8667,
#Deleted in new
chr6_GL000251v2_alt	2139216	2140321	chr6_GL000251v2_alt:2139216-2140321	0	-	2139216	2139216	8553170	3	152,99,546,	0,263,559,
#Deleted in new
chr6_GL000251v2_alt	2144873	2152732	chr6_GL000251v2_alt:2144873-2152732	0	-	2144873	2152726	789624	6	145,255,57,163,239,33,	0,349,5280,5660,5906,7826,
#Deleted in new
chr6_GL000251v2_alt	2156132	2167639	chr6_GL000251v2_alt:2156132-2167639	3	-	2157012	2165762	789624	3	900,211,3488,	0,2790,8019,
#Deleted in new
chr6_GL000251v2_alt	2156132	2166960	chr6_GL000251v2_alt:2156132-2166960	1	-	2157012	2165762	789624	4	900,211,1639,103,	0,2790,8019,10725,
#Deleted in new
chr6_GL000251v2_alt	2156132	2166902	chr6_GL000251v2_alt:2156132-2166902	0	-	2156132	2156132	8553170	3	900,211,45,	0,2790,10725,
#Deleted in new
chr6_GL000251v2_alt	2156132	2166937	chr6_GL000251v2_alt:2156132-2166937	0	-	2156132	2156132	8553170	4	900,211,137,80,	0,2790,8019,10725,
#Deleted in new
chr6_GL000251v2_alt	2167790	2170467	chr6_GL000251v2_alt:2167790-2170467	0	-	2168404	2170467	789624	4	896,177,197,131,	0,1229,2000,2546,
#Deleted in new
chr6_GL000251v2_alt	2167790	2171164	chr6_GL000251v2_alt:2167790-2171164	1	-	2168404	2170718	789624	5	896,177,197,440,45,	0,1229,2000,2795,3329,
#Deleted in new
chr6_GL000251v2_alt	2167790	2170720	chr6_GL000251v2_alt:2167790-2170720	1	-	2168404	2170718	789624	3	896,197,135,	0,2000,2795,
#Deleted in new
chr6_GL000251v2_alt	2167790	2170746	chr6_GL000251v2_alt:2167790-2170746	0	-	2167790	2167790	789624	4	896,177,219,161,	0,1229,1978,2795,
#Deleted in new
chr6_GL000251v2_alt	2167790	2170097	chr6_GL000251v2_alt:2167790-2170097	0	-	2167790	2167790	8553170	2	896,307,	0,2000,
#Deleted in new
chr6_GL000251v2_alt	2167790	2170730	chr6_GL000251v2_alt:2167790-2170730	0	-	2167790	2167790	8553170	3	896,219,145,	0,1978,2795,
#Deleted in new
chr6_GL000251v2_alt	2167790	2170711	chr6_GL000251v2_alt:2167790-2170711	0	-	2167790	2167790	789624	3	896,177,126,	0,1229,2795,
#Deleted in new
chr6_GL000251v2_alt	2167790	2170718	chr6_GL000251v2_alt:2167790-2170718	0	-	2167790	2167790	8553170	2	896,133,	0,2795,
#Deleted in new
chr6_GL000251v2_alt	2167793	2171052	chr6_GL000251v2_alt:2167793-2171052	3	-	2168404	2170718	789624	4	893,177,197,467,	0,1226,1997,2792,
#Deleted in new
chr6_GL000251v2_alt	2176547	2177277	chr6_GL000251v2_alt:2176547-2177277	7	-	2176547	2176547	16724991	1	730,	0,
#Deleted in new
chr6_GL000251v2_alt	2179546	2197629	chr6_GL000251v2_alt:2179546-2197629	3	-	2180204	2194915	0	15	826,111,126,183,120,2478,71,792,93,60,1481,70,381,139,645,	0,2747,2946,3298,3612,3815,7577,7759,11605,11860,12067,13841,13996,15233,17438,
#Deleted in new
chr6_GL000251v2_alt	2180054	2183822	chr6_GL000251v2_alt:2180054-2183822	0	-	2180054	2180054	8553170	5	318,111,126,183,664,	0,2239,2438,2790,3104,
#Deleted in new
chr6_GL000251v2_alt	2182807	2192924	chr6_GL000251v2_alt:2182807-2192924	3	+	2182807	2182807	789624	3	127,114,497,	0,9244,9620,
#Deleted in new
chr6_GL000251v2_alt	2185188	2191654	chr6_GL000251v2_alt:2185188-2191654	0	-	2185188	2191654	789624	5	651,71,93,60,41,	0,1935,5963,6218,6425,
#Deleted in new
chr6_GL000251v2_alt	2185322	2187425	chr6_GL000251v2_alt:2185322-2187425	0	-	2185322	2185322	8553170	2	517,302,	0,1801,
#Deleted in new
chr6_GL000251v2_alt	2191211	2191671	chr6_GL000251v2_alt:2191211-2191671	0	-	2191211	2191211	8553170	3	30,60,58,	0,195,402,
#Deleted in new
chr6_GL000251v2_alt	2192947	2196815	chr6_GL000251v2_alt:2192947-2196815	1	-	2193444	2194915	789624	7	147,70,20,107,153,139,194,	0,440,595,618,823,1832,3674,
#Deleted in new
chr6_GL000251v2_alt	2193572	2196915	chr6_GL000251v2_alt:2193572-2196915	0	-	2193572	2194915	789624	3	351,139,92,	0,1207,3251,
#Deleted in new
chr6_GL000251v2_alt	2193679	2197187	chr6_GL000251v2_alt:2193679-2197187	0	-	2193679	2194915	789624	3	244,139,199,	0,1100,3309,
#Deleted in new
chr6_GL000251v2_alt	2193719	2196861	chr6_GL000251v2_alt:2193719-2196861	0	-	2193719	2194915	789624	3	204,139,240,	0,1060,2902,
#Deleted in new
chr6_GL000251v2_alt	2199939	2205165	chr6_GL000251v2_alt:2199939-2205165	3	+	2200245	2204136	0	4	363,109,111,2087,	0,2336,2717,3139,
#Deleted in new
chr6_GL000251v2_alt	2201312	2205165	chr6_GL000251v2_alt:2201312-2205165	1	+	2202706	2204136	789624	4	325,109,111,2087,	0,963,1344,1766,
#Deleted in new
chr6_GL000251v2_alt	2201405	2205165	chr6_GL000251v2_alt:2201405-2205165	1	+	2201998	2204136	789624	4	596,109,111,2087,	0,870,1251,1673,
#Deleted in new
chr6_GL000251v2_alt	2201437	2205165	chr6_GL000251v2_alt:2201437-2205165	1	+	2202706	2204136	789624	4	516,109,111,2087,	0,838,1219,1641,
#Deleted in new
chr6_GL000251v2_alt	2207445	2222473	chr6_GL000251v2_alt:2207445-2222473	3	-	2207852	2221929	789624	13	437,165,138,46,182,153,96,120,144,91,76,57,207,	0,2314,2720,2974,3211,12452,12790,12973,13484,13908,14086,14441,14821,
#Deleted in new
chr6_GL000251v2_alt	2207445	2220593	chr6_GL000251v2_alt:2207445-2220593	0	-	2207445	2207445	8553170	7	437,165,138,419,153,96,175,	0,2314,2720,2974,12452,12790,12973,
#Deleted in new
chr6_GL000251v2_alt	2210656	2222047	chr6_GL000251v2_alt:2210656-2222047	0	-	2210656	2221907	789624	6	182,153,96,120,144,161,	0,9241,9579,9762,10273,11230,
#Deleted in new
chr6_GL000251v2_alt	2210728	2220534	chr6_GL000251v2_alt:2210728-2220534	0	-	2210728	2210728	8553170	3	110,153,299,	0,9169,9507,
#Deleted in new
chr6_GL000251v2_alt	2210804	2222240	chr6_GL000251v2_alt:2210804-2222240	0	-	2210804	2221929	789624	9	34,153,96,120,144,91,76,57,117,	0,9093,9431,9614,10125,10549,10727,11082,11319,
#Deleted in new
chr6_GL000251v2_alt	2216038	2216149	chr6_GL000251v2_alt:2216038-2216149	3	-	2216038	2216038	8553170	1	111,	0,
#Deleted in new
chr6_GL000251v2_alt	2219897	2222472	chr6_GL000251v2_alt:2219897-2222472	0	-	2219897	2219897	8553170	7	153,96,120,144,76,57,206,	0,338,521,1032,1634,1989,2369,
#Deleted in new
chr6_GL000251v2_alt	2219900	2222097	chr6_GL000251v2_alt:2219900-2222097	0	-	2219900	2222075	789624	3	150,96,211,	0,335,1986,
#Deleted in new
chr6_GL000251v2_alt	2219915	2222016	chr6_GL000251v2_alt:2219915-2222016	0	-	2219915	2221929	789624	7	135,96,120,144,91,76,130,	0,320,503,1014,1438,1616,1971,
#Deleted in new
chr6_GL000251v2_alt	2219993	2222446	chr6_GL000251v2_alt:2219993-2222446	0	-	2219993	2219993	8553170	7	57,96,120,515,76,57,180,	0,242,425,936,1538,1893,2273,
#Deleted in new
chr6_GL000251v2_alt	2219994	2221943	chr6_GL000251v2_alt:2219994-2221943	0	-	2219994	2221929	789624	7	56,96,120,144,43,76,57,	0,241,424,935,1407,1537,1892,
#Deleted in new
chr6_GL000251v2_alt	2220248	2222264	chr6_GL000251v2_alt:2220248-2222264	0	-	2220248	2221929	789624	7	83,120,144,91,76,57,58,	0,170,681,1105,1283,1638,1958,
#Deleted in new
chr6_GL000251v2_alt	2221093	2222417	chr6_GL000251v2_alt:2221093-2222417	0	-	2221093	2221093	8553170	2	850,151,	0,1173,
#Deleted in new
chr6_GL000251v2_alt	2222938	2224288	chr6_GL000251v2_alt:2222938-2224288	1	-	2223841	2224258	789624	1	1350,	0,
#Deleted in new
chr6_GL000251v2_alt	2222938	2224294	chr6_GL000251v2_alt:2222938-2224294	3	-	2223675	2224258	789624	2	998,246,	0,1110,
#Deleted in new
chr6_GL000251v2_alt	2230743	2230995	chr6_GL000251v2_alt:2230743-2230995	3	+	2230743	2230743	8553170	1	252,	0,
#Deleted in new
chr6_GL000251v2_alt	2246538	2271967	chr6_GL000251v2_alt:2246538-2271967	3	+	2246538	2246538	8553170	4	127,182,66,825,	0,21865,24069,24604,
#Deleted in new
chr6_GL000251v2_alt	2261671	2271967	chr6_GL000251v2_alt:2261671-2271967	0	+	2261671	2261671	8553170	3	169,182,825,	0,6732,9471,
#Deleted in new
chr6_GL000251v2_alt	2278377	2310390	chr6_GL000251v2_alt:2278377-2310390	0	-	2278377	2278377	8553170	2	119,145,	0,31868,
#Deleted in new
chr6_GL000251v2_alt	2292590	2310390	chr6_GL000251v2_alt:2292590-2310390	3	-	2292590	2292590	789624	2	1907,145,	0,17655,
#Deleted in new
chr6_GL000251v2_alt	2319259	2327898	chr6_GL000251v2_alt:2319259-2327898	3	-	2319259	2319259	789624	3	494,113,188,	0,7522,8451,
#Deleted in new
chr6_GL000251v2_alt	2343997	2344300	chr6_GL000251v2_alt:2343997-2344300	3	+	2343997	2343997	8553170	1	303,	0,
#Deleted in new
chr6_GL000251v2_alt	2346728	2355691	chr6_GL000251v2_alt:2346728-2355691	3	-	2346728	2346728	8553170	2	2850,1141,	0,7822,
#Deleted in new
chr6_GL000251v2_alt	2360743	2371966	chr6_GL000251v2_alt:2360743-2371966	0	+	2360743	2360743	8553170	7	151,127,103,229,148,100,194,	0,7713,7933,8227,9998,10405,11029,
#Deleted in new
chr6_GL000251v2_alt	2360796	2379927	chr6_GL000251v2_alt:2360796-2379927	3	+	2368498	2379067	0	20	98,173,56,127,103,229,148,100,187,247,96,152,166,111,245,128,219,235,150,1001,	0,3510,4597,7660,7880,8174,9945,10352,10976,11270,12042,12246,13480,14378,15595,15988,16353,17047,17862,18130,
#Deleted in new
chr6_GL000251v2_alt	2361063	2364476	chr6_GL000251v2_alt:2361063-2364476	0	+	2361063	2361063	8553170	2	76,170,	0,3243,
#Deleted in new
chr6_GL000251v2_alt	2362714	2370824	chr6_GL000251v2_alt:2362714-2370824	0	+	2368498	2370824	789624	5	38,127,103,229,83,	0,5742,5962,6256,8027,
#Deleted in new
chr6_GL000251v2_alt	2362859	2370767	chr6_GL000251v2_alt:2362859-2370767	0	+	2368498	2370767	789624	5	75,127,103,229,26,	0,5597,5817,6111,7882,
#Deleted in new
chr6_GL000251v2_alt	2363547	2379927	chr6_GL000251v2_alt:2363547-2379927	1	+	2368498	2379067	0	19	151,173,127,103,229,148,100,187,247,96,152,166,111,245,128,219,235,150,1001,	0,759,4909,5129,5423,7194,7601,8225,8519,9291,9495,10729,11627,12844,13237,13602,14296,15111,15379,
#Deleted in new
chr6_GL000251v2_alt	2363831	2379927	chr6_GL000251v2_alt:2363831-2379927	1	+	2368498	2379067	0	19	83,173,56,127,103,229,148,100,187,247,96,152,166,245,128,219,235,150,1001,	0,475,1562,4625,4845,5139,6910,7317,7941,8235,9007,9211,10445,12560,12953,13318,14012,14827,15095,
#Deleted in new
chr6_GL000251v2_alt	2364121	2369199	chr6_GL000251v2_alt:2364121-2369199	0	+	2368498	2369199	789624	5	358,56,127,103,229,	0,1272,4335,4555,4849,
#Deleted in new
chr6_GL000251v2_alt	2364226	2368781	chr6_GL000251v2_alt:2364226-2368781	0	+	2368498	2368781	789624	3	253,127,105,	0,4230,4450,
#Deleted in new
chr6_GL000251v2_alt	2364318	2379923	chr6_GL000251v2_alt:2364318-2379923	1	+	2368498	2379067	0	19	161,56,127,103,229,148,100,187,247,96,152,166,111,245,128,219,235,150,997,	0,1075,4138,4358,4652,6423,6830,7454,7748,8520,8724,9958,10856,12073,12466,12831,13525,14340,14608,
#Deleted in new
chr6_GL000251v2_alt	2364324	2379927	chr6_GL000251v2_alt:2364324-2379927	0	+	2364324	2364324	8553170	16	155,127,103,229,148,187,247,96,152,166,245,128,219,235,150,1001,	0,4132,4352,4646,6417,7448,7742,8514,8718,9952,12067,12460,12825,13519,14334,14602,
#Deleted in new
chr6_GL000251v2_alt	2364334	2379927	chr6_GL000251v2_alt:2364334-2379927	1	+	2368498	2379067	0	17	145,127,103,229,148,100,187,247,96,152,166,245,128,219,235,150,1001,	0,4122,4342,4636,6407,6814,7438,7732,8504,8708,9942,12057,12450,12815,13509,14324,14592,
#Deleted in new
chr6_GL000251v2_alt	2364748	2379923	chr6_GL000251v2_alt:2364748-2379923	1	+	2364988	2379067	0	17	252,127,103,229,148,100,187,247,96,152,166,245,128,219,235,150,997,	0,3708,3928,4222,5993,6400,7024,7318,8090,8294,9528,11643,12036,12401,13095,13910,14178,
#Deleted in new
chr6_GL000251v2_alt	2364994	2371211	chr6_GL000251v2_alt:2364994-2371211	0	+	2368498	2371211	789624	6	129,127,103,229,148,63,	0,3462,3682,3976,5747,6154,
#Deleted in new
chr6_GL000251v2_alt	2368157	2379927	chr6_GL000251v2_alt:2368157-2379927	1	+	2368498	2379067	0	16	426,103,229,148,100,187,247,96,152,166,245,128,219,235,150,1001,	0,519,813,2584,2991,3615,3909,4681,4885,6119,8234,8627,8992,9686,10501,10769,
#Deleted in new
chr6_GL000251v2_alt	2368456	2379923	chr6_GL000251v2_alt:2368456-2379923	1	+	2368498	2379067	789624	15	127,103,229,148,100,187,247,96,152,84,128,219,235,150,997,	0,220,514,2285,2692,3316,3610,4382,4586,5902,8328,8693,9387,10202,10470,
#Deleted in new
chr6_GL000251v2_alt	2368498	2371939	chr6_GL000251v2_alt:2368498-2371939	1	+	2368498	2371939	0	5	85,103,229,148,167,	0,178,472,2243,3274,
#Deleted in new
chr6_GL000251v2_alt	2370910	2371949	chr6_GL000251v2_alt:2370910-2371949	0	+	2370910	2370910	8553170	2	338,177,	0,862,
#Deleted in new
chr6_GL000251v2_alt	2371195	2377910	chr6_GL000251v2_alt:2371195-2377910	0	+	2371195	2377910	789624	11	53,187,247,96,152,84,111,135,128,219,67,	0,577,871,1643,1847,3163,3979,5306,5589,5954,6648,
#Deleted in new
chr6_GL000251v2_alt	2373125	2376817	chr6_GL000251v2_alt:2373125-2376817	0	+	2373125	2373125	8553170	3	69,166,33,	0,1151,3659,
#Deleted in new
chr6_GL000251v2_alt	2376391	2379927	chr6_GL000251v2_alt:2376391-2379927	0	+	2376391	2379067	789624	6	245,128,237,235,150,1001,	0,393,740,1452,2267,2535,
#Deleted in new
chr6_GL000251v2_alt	2376845	2379175	chr6_GL000251v2_alt:2376845-2379175	0	+	2376845	2376845	8553170	4	67,219,235,517,	0,304,998,1813,
#Deleted in new
chr6_GL000251v2_alt	2387929	2393852	chr6_GL000251v2_alt:2387929-2393852	3	+	2388782	2393729	0	14	220,140,105,132,97,89,112,69,84,133,131,48,79,296,	0,850,1251,1748,2481,2669,2974,3247,3500,3830,4144,4926,5125,5627,
#Deleted in new
chr6_GL000251v2_alt	2387966	2393852	chr6_GL000251v2_alt:2387966-2393852	1	+	2388782	2393729	0	14	158,140,105,132,97,89,112,69,84,133,131,48,79,296,	0,813,1214,1711,2444,2632,2937,3210,3463,3793,4107,4889,5088,5590,
#Deleted in new
chr6_GL000251v2_alt	2387968	2390380	chr6_GL000251v2_alt:2387968-2390380	0	+	2388782	2390380	789624	5	181,140,105,132,40,	0,811,1212,1709,2372,
#Deleted in new
chr6_GL000251v2_alt	2387987	2406057	chr6_GL000251v2_alt:2387987-2406057	2	+	2387987	2387987	8553170	41	162,140,105,132,97,89,112,69,84,445,48,79,1227,82,101,122,67,98,107,120,112,89,91,128,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,351,	0,792,1193,1690,2423,2611,2916,3189,3442,3772,4868,5067,5569,6914,7113,7504,7739,7902,8628,8855,9445,10437,11368,11699,11943,12278,12675,12840,13199,13535,13726,14060,14316,14508,14714,14963,15964,16884,17154,17490,17719,
#Deleted in new
chr6_GL000251v2_alt	2389187	2392139	chr6_GL000251v2_alt:2389187-2392139	0	+	2389187	2389187	8553170	8	98,132,97,89,112,69,463,66,	0,490,1223,1411,1716,1989,2242,2886,
#Deleted in new
chr6_GL000251v2_alt	2391696	2393852	chr6_GL000251v2_alt:2391696-2393852	0	+	2391696	2391696	8553170	3	508,278,296,	0,1159,1860,
#Deleted in new
chr6_GL000251v2_alt	2391968	2393852	chr6_GL000251v2_alt:2391968-2393852	0	+	2391968	2391968	8553170	4	236,48,79,296,	0,887,1086,1588,
#Deleted in new
chr6_GL000251v2_alt	2393950	2406057	chr6_GL000251v2_alt:2393950-2406057	1	+	2394582	2405808	789624	29	833,82,101,122,67,98,82,120,112,89,91,128,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,351,	0,951,1150,1541,1776,1939,2665,2892,3482,4474,5405,5736,5980,6315,6712,6877,7236,7572,7763,8097,8353,8545,8751,9000,10001,10921,11191,11527,11756,
#Deleted in new
chr6_GL000251v2_alt	2393950	2406054	chr6_GL000251v2_alt:2393950-2406054	3	+	2394582	2405808	789624	29	833,82,101,122,67,98,82,120,112,89,91,122,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,348,	0,951,1150,1541,1776,1939,2665,2892,3482,4474,5405,5742,5980,6315,6712,6877,7236,7572,7763,8097,8353,8545,8751,9000,10001,10921,11191,11527,11756,
#Deleted in new
chr6_GL000251v2_alt	2393997	2397537	chr6_GL000251v2_alt:2393997-2397537	0	+	2394582	2397537	789624	10	93,233,82,101,122,67,98,82,120,105,	0,553,904,1103,1494,1729,1892,2618,2845,3435,
#Deleted in new
chr6_GL000251v2_alt	2394011	2397544	chr6_GL000251v2_alt:2394011-2397544	0	+	2394011	2394011	8553170	9	79,82,101,122,67,98,82,120,112,	0,890,1089,1480,1715,1878,2604,2831,3421,
#Deleted in new
chr6_GL000251v2_alt	2394076	2406054	chr6_GL000251v2_alt:2394076-2406054	1	+	2394157	2405808	789624	30	139,233,82,101,122,67,98,82,120,112,89,91,128,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,348,	0,474,825,1024,1415,1650,1813,2539,2766,3356,4348,5279,5610,5854,6189,6586,6751,7110,7446,7637,7971,8227,8419,8625,8874,9875,10795,11065,11401,11630,
#Deleted in new
chr6_GL000251v2_alt	2394127	2395162	chr6_GL000251v2_alt:2394127-2395162	0	+	2394582	2395162	789624	4	88,228,82,62,	0,428,774,973,
#Deleted in new
chr6_GL000251v2_alt	2396165	2397499	chr6_GL000251v2_alt:2396165-2397499	0	+	2396165	2396165	8553170	3	532,120,67,	0,677,1267,
#Deleted in new
chr6_GL000251v2_alt	2398391	2406057	chr6_GL000251v2_alt:2398391-2406057	0	+	2398391	2398391	8553170	19	1055,128,104,82,77,76,103,71,126,173,69,79,128,153,207,112,176,129,351,	0,1295,1539,1874,2271,2436,2795,3131,3322,3588,3912,4104,4310,4559,5560,6480,6750,7086,7315,
#Deleted in new
chr6_GL000251v2_alt	2399423	2406057	chr6_GL000251v2_alt:2399423-2406057	0	+	2399423	2399423	8553170	18	23,128,104,82,77,76,103,126,105,69,79,128,153,207,112,176,129,351,	0,263,507,842,1239,1404,1763,2290,2624,2880,3072,3278,3527,4528,5448,5718,6054,6283,
#Deleted in new
chr6_GL000251v2_alt	2401727	2405272	chr6_GL000251v2_alt:2401727-2405272	0	+	2401727	2401727	8553170	8	112,105,69,79,128,153,211,131,	0,320,576,768,974,1223,2224,3414,
#Deleted in new
chr6_GL000251v2_alt	2402180	2403103	chr6_GL000251v2_alt:2402180-2403103	0	+	2402180	2402180	8553170	4	192,79,128,153,	0,315,521,770,
#Deleted in new
chr6_GL000251v2_alt	2402805	2406057	chr6_GL000251v2_alt:2402805-2406057	0	+	2402805	2402805	8553170	6	24,1208,112,176,129,351,	0,145,2066,2336,2672,2901,
#Deleted in new
chr6_GL000251v2_alt	2410946	2411769	chr6_GL000251v2_alt:2410946-2411769	3	-	2411081	2411690	789624	3	222,89,140,	0,354,683,
#Deleted in new
chr6_GL000251v2_alt	2410946	2411703	chr6_GL000251v2_alt:2410946-2411703	0	-	2410946	2410946	8553170	2	222,403,	0,354,
#Deleted in new
chr6_GL000251v2_alt	2412212	2412301	chr6_GL000251v2_alt:2412212-2412301	3	-	2412212	2412212	8553170	1	89,	0,
#Deleted in new
chr6_GL000251v2_alt	2420583	2432827	chr6_GL000251v2_alt:2420583-2432827	3	+	2420583	2432692	789624	4	82,864,461,282,	0,7538,11030,11962,
#Deleted in new
chr6_GL000251v2_alt	2425553	2434436	chr6_GL000251v2_alt:2425553-2434436	3	-	2425553	2425553	8553170	3	381,138,86,	0,7088,8797,
#Deleted in new
chr6_GL000251v2_alt	2430697	2433795	chr6_GL000251v2_alt:2430697-2433795	0	+	2430697	2432692	789624	2	1377,1250,	0,1848,
#Deleted in new
chr6_GL000251v2_alt	2463288	2469484	chr6_GL000251v2_alt:2463288-2469484	3	+	2463529	2467775	789624	3	302,1445,1904,	0,2529,4292,
#Deleted in new
chr6_GL000251v2_alt	2463288	2465970	chr6_GL000251v2_alt:2463288-2465970	0	+	2463288	2463288	8553170	2	444,153,	0,2529,
#Deleted in new
chr6_GL000251v2_alt	2490064	2515096	chr6_GL000251v2_alt:2490064-2515096	3	+	2490064	2490064	8553170	4	303,4599,386,731,	0,15130,21825,24301,
#Deleted in new
chr6_GL000251v2_alt	2509604	2514402	chr6_GL000251v2_alt:2509604-2514402	0	+	2509604	2509604	8553170	3	189,386,37,	0,2285,4761,
#Deleted in new
chr6_GL000251v2_alt	2535826	2542268	chr6_GL000251v2_alt:2535826-2542268	7	+	2535826	2535826	16724991	4	82,417,693,483,	0,650,2769,5959,
#Deleted in new
chr6_GL000251v2_alt	2536583	2542254	chr6_GL000251v2_alt:2536583-2542254	4	+	2536583	2536583	16724991	3	310,1202,469,	0,1503,5202,
#Deleted in new
chr6_GL000251v2_alt	2536706	2539168	chr6_GL000251v2_alt:2536706-2539168	5	+	2536706	2536706	16724991	2	187,573,	0,1889,
#Deleted in new
chr6_GL000251v2_alt	2565384	2565484	chr6_GL000251v2_alt:2565384-2565484	3	+	2565384	2565384	8553170	1	100,	0,
#Deleted in new
chr6_GL000251v2_alt	2593597	2594934	chr6_GL000251v2_alt:2593597-2594934	3	-	2593755	2594930	789624	2	1069,71,	0,1266,
#Deleted in new
chr6_GL000251v2_alt	2597124	2601192	chr6_GL000251v2_alt:2597124-2601192	0	+	2597124	2597124	8553170	2	142,3682,	0,386,
#Deleted in new
chr6_GL000251v2_alt	2597199	2599671	chr6_GL000251v2_alt:2597199-2599671	0	+	2597199	2597199	8553170	2	67,207,	0,2265,
#Deleted in new
chr6_GL000251v2_alt	2597205	2622431	chr6_GL000251v2_alt:2597205-2622431	3	+	2612022	2622325	789624	6	61,164,77,30,124,398,	0,10848,14753,23617,23843,24828,
#Deleted in new
chr6_GL000251v2_alt	2597205	2622431	chr6_GL000251v2_alt:2597205-2622431	0	+	2597205	2597205	8553170	2	61,398,	0,24828,
#Deleted in new
chr6_GL000251v2_alt	2597464	2602822	chr6_GL000251v2_alt:2597464-2602822	3	-	2598399	2602795	789624	2	2437,112,	0,5246,
#Deleted in new
chr6_GL000251v2_alt	2619926	2621743	chr6_GL000251v2_alt:2619926-2621743	3	-	2620343	2621419	789624	2	773,379,	0,1438,
#Deleted in new
chr6_GL000251v2_alt	2620812	2622430	chr6_GL000251v2_alt:2620812-2622430	1	+	2620812	2622325	789624	3	40,124,397,	0,236,1221,
#Deleted in new
chr6_GL000251v2_alt	2623116	2623303	chr6_GL000251v2_alt:2623116-2623303	7	+	2623116	2623116	16724991	1	187,	0,
#Deleted in new
chr6_GL000251v2_alt	2624869	2640628	chr6_GL000251v2_alt:2624869-2640628	1	-	2625022	2639462	789624	16	278,172,152,102,189,137,107,111,150,111,136,164,304,214,133,34,	0,524,823,2248,2446,2727,5953,6166,7613,8002,8272,8506,12038,14285,14577,15725,
#Deleted in new
chr6_GL000251v2_alt	2624869	2640217	chr6_GL000251v2_alt:2624869-2640217	1	-	2625022	2639462	789624	18	278,172,152,102,189,137,46,113,107,111,150,111,136,164,304,214,67,405,	0,524,823,2248,2446,2727,3009,3257,5953,6166,7613,8002,8272,8506,12038,14285,14577,14943,
#Deleted in new
chr6_GL000251v2_alt	2624869	2640641	chr6_GL000251v2_alt:2624869-2640641	3	-	2625022	2639462	789624	18	278,172,152,102,189,137,46,113,107,111,150,111,136,164,304,214,67,47,	0,524,823,2248,2446,2727,3009,3257,5953,6166,7613,8002,8272,8506,12038,14285,14577,15725,
#Deleted in new
chr6_GL000251v2_alt	2624869	2627667	chr6_GL000251v2_alt:2624869-2627667	0	-	2625022	2627667	789624	6	278,130,152,102,189,71,	0,524,823,2248,2446,2727,
#Deleted in new
chr6_GL000251v2_alt	2624870	2640217	chr6_GL000251v2_alt:2624870-2640217	1	-	2625022	2640028	789624	19	277,172,152,102,189,137,46,113,107,111,150,111,136,164,304,214,49,15,405,	0,523,822,2247,2445,2726,3008,3256,5952,6165,7612,8001,8271,8505,12037,14284,14576,14628,14942,
#Deleted in new
chr6_GL000251v2_alt	2625490	2627733	chr6_GL000251v2_alt:2625490-2627733	0	-	2625490	2625490	8553170	3	75,387,115,	0,1627,2128,
#Deleted in new
chr6_GL000251v2_alt	2625526	2627546	chr6_GL000251v2_alt:2625526-2627546	0	-	2625526	2625526	8553170	4	39,152,160,231,	0,166,1533,1789,
#Deleted in new
chr6_GL000251v2_alt	2631576	2640619	chr6_GL000251v2_alt:2631576-2640619	0	-	2631576	2631576	8553170	3	509,67,25,	0,7870,9018,
#Deleted in new
chr6_GL000251v2_alt	2632521	2639514	chr6_GL000251v2_alt:2632521-2639514	0	-	2632521	2639462	789624	7	111,111,136,164,304,106,68,	0,350,620,854,4386,6633,6925,
#Deleted in new
chr6_GL000251v2_alt	2633283	2637163	chr6_GL000251v2_alt:2633283-2637163	0	-	2633283	2633283	8553170	2	256,256,	0,3624,
#Deleted in new
chr6_GL000251v2_alt	2633508	2640510	chr6_GL000251v2_alt:2633508-2640510	0	-	2633508	2639462	789624	5	31,304,214,67,84,	0,3399,5646,5938,6918,
#Deleted in new
chr6_GL000251v2_alt	2636983	2640615	chr6_GL000251v2_alt:2636983-2640615	0	-	2636983	2639462	789624	5	228,214,67,116,21,	0,2171,2463,2829,3611,
#Deleted in new
chr6_GL000251v2_alt	2637005	2640497	chr6_GL000251v2_alt:2637005-2640497	0	-	2637005	2639462	789624	4	206,359,116,59,	0,2149,2807,3433,
#Deleted in new
chr6_GL000251v2_alt	2637085	2640216	chr6_GL000251v2_alt:2637085-2640216	0	-	2637085	2639462	789624	4	126,214,67,431,	0,2069,2361,2700,
#Deleted in new
chr6_GL000251v2_alt	2637139	2640633	chr6_GL000251v2_alt:2637139-2640633	0	-	2637139	2639462	789624	3	72,359,39,	0,2015,3455,
#Deleted in new
chr6_GL000251v2_alt	2638655	2639513	chr6_GL000251v2_alt:2638655-2639513	0	-	2638655	2638655	8553170	2	713,67,	0,791,
#Deleted in new
chr6_GL000251v2_alt	2640969	2646639	chr6_GL000251v2_alt:2640969-2646639	3	+	2641897	2645140	789624	4	181,811,559,1740,	0,355,2900,3930,
#Deleted in new
chr6_GL000251v2_alt	2640974	2646639	chr6_GL000251v2_alt:2640974-2646639	1	+	2641897	2645140	789624	4	176,565,559,1740,	0,596,2895,3925,
#Deleted in new
chr6_GL000251v2_alt	2643906	2645430	chr6_GL000251v2_alt:2643906-2645430	0	+	2643906	2643906	8553170	3	94,255,531,	0,267,993,
#Deleted in new
chr6_GL000251v2_alt	2646760	2653135	chr6_GL000251v2_alt:2646760-2653135	1	-	2647024	2653062	789624	5	531,159,131,121,478,	0,793,1236,1600,5897,
#Deleted in new
chr6_GL000251v2_alt	2646760	2648702	chr6_GL000251v2_alt:2646760-2648702	3	-	2647024	2648601	789624	4	531,159,131,342,	0,793,1236,1600,
#Deleted in new
chr6_GL000251v2_alt	2646760	2647718	chr6_GL000251v2_alt:2646760-2647718	0	-	2646760	2646760	8553170	2	531,165,	0,793,
#Deleted in new
chr6_GL000251v2_alt	2648125	2653100	chr6_GL000251v2_alt:2648125-2653100	0	-	2648125	2648125	8553170	2	356,443,	0,4532,
#Deleted in new
chr6_GL000251v2_alt	2656175	2660341	chr6_GL000251v2_alt:2656175-2660341	3	-	2656175	2656175	789624	3	299,33,261,	0,503,3905,
#Deleted in new
chr6_GL000251v2_alt	2680203	2686408	chr6_GL000251v2_alt:2680203-2686408	3	+	2680203	2680203	789624	2	123,1596,	0,4609,
#Deleted in new
chr6_GL000251v2_alt	2680581	2685663	chr6_GL000251v2_alt:2680581-2685663	0	+	2680581	2680581	8553170	2	44,851,	0,4231,
#Deleted in new
chr6_GL000251v2_alt	2682608	2684361	chr6_GL000251v2_alt:2682608-2684361	3	-	2682608	2682608	8553170	2	474,42,	0,1711,
#Deleted in new
chr6_GL000251v2_alt	2684453	2685442	chr6_GL000251v2_alt:2684453-2685442	0	+	2684453	2684453	8553170	2	41,630,	0,359,
#Deleted in new
chr6_GL000251v2_alt	2749674	2753019	chr6_GL000251v2_alt:2749674-2753019	1	-	2749997	2752997	789624	6	415,120,276,276,270,95,	0,1217,1461,2324,2850,3250,
#Deleted in new
chr6_GL000251v2_alt	2749674	2753012	chr6_GL000251v2_alt:2749674-2753012	1	-	2750094	2752997	789624	8	425,48,51,120,276,276,270,88,	0,589,744,1217,1461,2324,2850,3250,
#Deleted in new
chr6_GL000251v2_alt	2749674	2753056	chr6_GL000251v2_alt:2749674-2753056	3	-	2750094	2752997	789624	8	425,48,33,120,276,276,270,132,	0,589,744,1217,1461,2324,2850,3250,
#Deleted in new
chr6_GL000251v2_alt	2749674	2753012	chr6_GL000251v2_alt:2749674-2753012	1	-	2749997	2752997	789624	7	425,48,149,276,276,270,88,	0,589,1188,1461,2324,2850,3250,
#Deleted in new
chr6_GL000251v2_alt	2749674	2753031	chr6_GL000251v2_alt:2749674-2753031	0	-	2752204	2752997	789624	8	425,48,33,120,276,259,270,107,	0,589,744,1217,1461,2324,2850,3250,
#Deleted in new
chr6_GL000251v2_alt	2749674	2750592	chr6_GL000251v2_alt:2749674-2750592	0	-	2749674	2749674	8553170	2	425,329,	0,589,
#Deleted in new
chr6_GL000251v2_alt	2749674	2751348	chr6_GL000251v2_alt:2749674-2751348	0	-	2749674	2749674	8553170	4	425,48,593,213,	0,589,744,1461,
#Deleted in new
chr6_GL000251v2_alt	2749674	2752976	chr6_GL000251v2_alt:2749674-2752976	0	-	2749674	2749674	8553170	6	425,48,33,120,276,978,	0,589,744,1217,1461,2324,
#Deleted in new
chr6_GL000251v2_alt	2750285	2751223	chr6_GL000251v2_alt:2750285-2751223	1	-	2750285	2751223	789624	3	26,33,88,	0,133,850,
#Deleted in new
chr6_GL000251v2_alt	2750416	2835764	chr6_GL000251v2_alt:2750416-2835764	3	-	2750416	2835764	789624	3	35,117,88,	0,85050,85260,
#Deleted in new
chr6_GL000251v2_alt	2751135	2752999	chr6_GL000251v2_alt:2751135-2752999	0	-	2751570	2752997	789624	5	276,69,276,270,75,	0,422,863,1389,1789,
#Deleted in new
chr6_GL000251v2_alt	2751139	2752995	chr6_GL000251v2_alt:2751139-2752995	0	-	2751139	2752995	789624	5	118,47,276,270,71,	0,225,859,1385,1785,
#Deleted in new
chr6_GL000251v2_alt	2751146	2753056	chr6_GL000251v2_alt:2751146-2753056	0	-	2751146	2751146	8553170	3	265,276,532,	0,852,1378,
#Deleted in new
chr6_GL000251v2_alt	2752024	2753016	chr6_GL000251v2_alt:2752024-2753016	0	-	2752024	2752024	8553170	2	770,92,	0,900,
#Deleted in new
chr6_GL000251v2_alt	2756492	2759664	chr6_GL000251v2_alt:2756492-2759664	7	+	2756492	2756492	16724991	1	3172,	0,
#Deleted in new
chr6_GL000251v2_alt	2761226	2762429	chr6_GL000251v2_alt:2761226-2762429	7	+	2761226	2761226	16724991	1	1203,	0,
#Deleted in new
chr6_GL000251v2_alt	2768420	2769875	chr6_GL000251v2_alt:2768420-2769875	7	-	2768420	2768420	16724991	1	1455,	0,
#Deleted in new
chr6_GL000251v2_alt	2788724	2789459	chr6_GL000251v2_alt:2788724-2789459	7	-	2788724	2788724	16724991	2	233,73,	0,662,
#Deleted in new
chr6_GL000251v2_alt	2834231	2836761	chr6_GL000251v2_alt:2834231-2836761	0	-	2834842	2836761	789624	6	425,48,51,117,276,237,	0,607,761,1235,1445,2293,
#Deleted in new
chr6_GL000251v2_alt	2834231	2837604	chr6_GL000251v2_alt:2834231-2837604	1	-	2834842	2837517	0	8	425,48,33,117,276,276,270,160,	0,607,761,1235,1445,2293,2815,3213,
#Deleted in new
chr6_GL000251v2_alt	2834231	2835166	chr6_GL000251v2_alt:2834231-2835166	0	-	2834231	2834231	8553170	2	425,328,	0,607,
#Deleted in new
chr6_GL000251v2_alt	2834231	2835436	chr6_GL000251v2_alt:2834231-2835436	0	-	2834231	2834231	8553170	3	425,48,444,	0,607,761,
#Deleted in new
chr6_GL000251v2_alt	2835481	2836160	chr6_GL000251v2_alt:2835481-2836160	0	-	2835481	2835481	8553170	2	102,484,	0,195,
#Deleted in new
chr6_GL000251v2_alt	2835541	2837519	chr6_GL000251v2_alt:2835541-2837519	0	-	2836108	2837517	789624	6	42,276,69,276,270,75,	0,135,554,983,1505,1903,
#Deleted in new
chr6_GL000251v2_alt	2835750	2837538	chr6_GL000251v2_alt:2835750-2837538	0	-	2835750	2835750	8553170	3	202,792,94,	0,774,1694,
#Deleted in new
chr6_GL000251v2_alt	2835866	2837547	chr6_GL000251v2_alt:2835866-2837547	0	-	2835866	2837422	789624	3	86,276,501,	0,658,1180,
#Deleted in new
chr6_GL000251v2_alt	2846705	2847252	chr6_GL000251v2_alt:2846705-2847252	7	-	2846705	2846705	16724991	1	547,	0,
#Deleted in new
chr6_GL000251v2_alt	2850469	2850576	chr6_GL000251v2_alt:2850469-2850576	3	+	2850469	2850469	8553170	1	107,	0,
#Deleted in new
chr6_GL000251v2_alt	2857746	2858349	chr6_GL000251v2_alt:2857746-2858349	7	+	2857746	2857746	16724991	1	603,	0,
#Deleted in new
chr6_GL000251v2_alt	2860751	2861178	chr6_GL000251v2_alt:2860751-2861178	7	+	2860751	2860751	16724991	1	427,	0,
#Deleted in new
chr6_GL000251v2_alt	2862421	2862636	chr6_GL000251v2_alt:2862421-2862636	7	-	2862421	2862421	16724991	2	5,48,	0,167,
#Deleted in new
chr6_GL000251v2_alt	2880150	2895686	chr6_GL000251v2_alt:2880150-2895686	3	+	2891085	2892802	789624	6	980,255,116,279,136,304,	0,10763,11464,12167,12545,15232,
#Deleted in new
chr6_GL000251v2_alt	2880150	2895684	chr6_GL000251v2_alt:2880150-2895684	1	+	2891134	2892802	789624	6	1000,255,288,279,136,302,	0,10763,11292,12167,12545,15232,
#Deleted in new
chr6_GL000251v2_alt	2881013	2891168	chr6_GL000251v2_alt:2881013-2891168	0	+	2881013	2881013	8553170	2	117,255,	0,9900,
#Deleted in new
chr6_GL000251v2_alt	2881115	2895686	chr6_GL000251v2_alt:2881115-2895686	1	+	2884002	2892802	789624	8	15,200,258,255,288,279,136,304,	0,1411,2699,9798,10327,11202,11580,14267,
#Deleted in new
chr6_GL000251v2_alt	2882521	2882620	chr6_GL000251v2_alt:2882521-2882620	3	-	2882521	2882521	8553170	1	99,	0,
#Deleted in new
chr6_GL000251v2_alt	2883908	2896610	chr6_GL000251v2_alt:2883908-2896610	1	+	2884002	2892802	789624	6	164,255,159,279,136,1228,	0,7005,7663,8409,8787,11474,
#Deleted in new
chr6_GL000251v2_alt	2883936	2895684	chr6_GL000251v2_alt:2883936-2895684	1	+	2884002	2892802	789624	6	136,255,288,279,136,302,	0,6977,7506,8381,8759,11446,
#Deleted in new
chr6_GL000251v2_alt	2884041	2895686	chr6_GL000251v2_alt:2884041-2895686	0	+	2884041	2892802	789624	5	31,255,279,136,304,	0,6872,8276,8654,11341,
#Deleted in new
chr6_GL000251v2_alt	2891233	2892831	chr6_GL000251v2_alt:2891233-2892831	0	+	2891233	2891233	8553170	3	497,279,136,	0,1084,1462,
#Deleted in new
chr6_GL000251v2_alt	2921971	2927272	chr6_GL000251v2_alt:2921971-2927272	3	+	2921971	2921971	8553170	2	645,1493,	0,3808,
#Deleted in new
chr6_GL000251v2_alt	2940499	2943134	chr6_GL000251v2_alt:2940499-2943134	3	+	2940499	2940499	789624	2	105,2439,	0,196,
#Deleted in new
chr6_GL000251v2_alt	2940509	2943134	chr6_GL000251v2_alt:2940509-2943134	0	+	2940509	2940509	8553170	4	95,138,228,1963,	0,186,405,662,
#Deleted in new
chr6_GL000251v2_alt	2974030	2974132	chr6_GL000251v2_alt:2974030-2974132	3	-	2974030	2974030	8553170	1	102,	0,
#Deleted in new
chr6_GL000251v2_alt	2975425	2988464	chr6_GL000251v2_alt:2975425-2988464	3	+	2975533	2987251	789624	6	178,255,159,279,132,1341,	0,7533,8188,8938,9316,11698,
#Deleted in new
chr6_GL000251v2_alt	2975454	2988464	chr6_GL000251v2_alt:2975454-2988464	1	+	2975533	2987251	789624	6	149,255,288,279,132,1341,	0,7504,8030,8909,9287,11669,
#Deleted in new
chr6_GL000251v2_alt	2983276	2984873	chr6_GL000251v2_alt:2983276-2984873	0	+	2983276	2983276	8553170	3	496,279,132,	0,1087,1465,
#Deleted in new
chr6_GL000251v2_alt	2996823	2997635	chr6_GL000251v2_alt:2996823-2997635	7	-	2996823	2996823	16724991	2	171,327,	0,485,
#Deleted in new
chr6_GL000251v2_alt	3005446	3006026	chr6_GL000251v2_alt:3005446-3006026	7	+	3005446	3005446	16724991	1	580,	0,
#Deleted in new
chr6_GL000251v2_alt	3006049	3007565	chr6_GL000251v2_alt:3006049-3007565	3	+	3006347	3007268	789624	2	469,486,	0,1030,
#Deleted in new
chr6_GL000251v2_alt	3007551	3023908	chr6_GL000251v2_alt:3007551-3023908	1	-	3007766	3017863	0	13	232,148,145,110,132,119,184,93,128,343,199,101,105,	0,560,834,1077,2561,5148,6281,8544,8928,10101,11728,15887,16252,
#Deleted in new
chr6_GL000251v2_alt	3007551	3019778	chr6_GL000251v2_alt:3007551-3019778	1	-	3007766	3017863	0	11	232,148,145,110,132,119,184,93,128,343,499,	0,560,834,1077,2561,5148,6281,8544,8928,10101,11728,
#Deleted in new
chr6_GL000251v2_alt	3007551	3017867	chr6_GL000251v2_alt:3007551-3017867	1	-	3008126	3017863	789624	10	232,171,145,110,132,119,184,93,128,215,	0,560,834,1077,2561,5148,6281,8544,8928,10101,
#Deleted in new
chr6_GL000251v2_alt	3007551	3019778	chr6_GL000251v2_alt:3007551-3019778	1	-	3007766	3017863	0	11	232,148,145,110,132,119,184,93,128,213,499,	0,560,834,1077,2561,5148,6281,8544,8928,10101,11728,
#Deleted in new
chr6_GL000251v2_alt	3007551	3012808	chr6_GL000251v2_alt:3007551-3012808	0	-	3008438	3012808	789624	6	232,148,126,110,132,109,	0,560,834,1077,2561,5148,
#Deleted in new
chr6_GL000251v2_alt	3007551	3009077	chr6_GL000251v2_alt:3007551-3009077	0	-	3007551	3007551	8553170	4	232,148,145,449,	0,560,834,1077,
#Deleted in new
chr6_GL000251v2_alt	3007551	3019347	chr6_GL000251v2_alt:3007551-3019347	0	-	3007551	3007551	8553170	10	232,148,145,110,2706,184,93,128,343,68,	0,560,834,1077,2561,6281,8544,8928,10101,11728,
#Deleted in new
chr6_GL000251v2_alt	3008111	3011844	chr6_GL000251v2_alt:3008111-3011844	0	-	3008111	3011844	789624	5	148,145,110,132,26,	0,274,517,2001,3707,
#Deleted in new
chr6_GL000251v2_alt	3008448	3009004	chr6_GL000251v2_alt:3008448-3009004	0	-	3008448	3008448	8553170	2	63,376,	0,180,
#Deleted in new
chr6_GL000251v2_alt	3008628	3019731	chr6_GL000251v2_alt:3008628-3019731	2	-	3008628	3017850	789624	6	110,132,119,184,213,452,	0,1484,4071,5204,9024,10651,
#Deleted in new
chr6_GL000251v2_alt	3008634	3019311	chr6_GL000251v2_alt:3008634-3019311	0	-	3008634	3017850	789624	6	104,132,119,184,343,32,	0,1478,4065,5198,9018,10645,
#Deleted in new
chr6_GL000251v2_alt	3009745	3019333	chr6_GL000251v2_alt:3009745-3019333	0	-	3009745	3009745	8553170	5	3073,184,93,128,1681,	0,4087,6350,6734,7907,
#Deleted in new
chr6_GL000251v2_alt	3010112	3018861	chr6_GL000251v2_alt:3010112-3018861	0	-	3010112	3017863	789624	7	132,119,184,93,128,213,136,	0,2587,3720,5983,6367,7540,8613,
#Deleted in new
chr6_GL000251v2_alt	3012720	3019348	chr6_GL000251v2_alt:3012720-3019348	0	-	3012720	3017863	789624	6	98,184,93,128,245,69,	0,1112,3375,3759,4932,6559,
#Deleted in new
chr6_GL000251v2_alt	3012727	3018814	chr6_GL000251v2_alt:3012727-3018814	0	-	3012727	3017863	789624	6	91,184,93,128,343,89,	0,1105,3368,3752,4925,5998,
#Deleted in new
chr6_GL000251v2_alt	3012739	3019267	chr6_GL000251v2_alt:3012739-3019267	0	-	3012739	3017863	789624	6	79,184,93,128,343,105,	0,1093,3356,3740,4913,6423,
#Deleted in new
chr6_GL000251v2_alt	3013706	3013782	chr6_GL000251v2_alt:3013706-3013782	3	-	3013706	3013706	789624	1	76,	0,
#Deleted in new
chr6_GL000251v2_alt	3013941	3019319	chr6_GL000251v2_alt:3013941-3019319	0	-	3013941	3017863	789624	5	75,177,128,213,40,	0,2154,2538,3711,5338,
#Deleted in new
chr6_GL000251v2_alt	3013955	3019059	chr6_GL000251v2_alt:3013955-3019059	0	-	3013955	3019030	789624	5	61,93,128,213,96,	0,2140,2524,3697,5008,
#Deleted in new
chr6_GL000251v2_alt	3016151	3019316	chr6_GL000251v2_alt:3016151-3019316	0	-	3016151	3017863	789624	5	37,128,343,175,37,	0,328,1501,2331,3128,
#Deleted in new
chr6_GL000251v2_alt	3016163	3019321	chr6_GL000251v2_alt:3016163-3019321	0	-	3016163	3018525	789624	5	25,128,213,175,42,	0,316,1489,2319,3116,
#Deleted in new
chr6_GL000251v2_alt	3016214	3019333	chr6_GL000251v2_alt:3016214-3019333	0	-	3016214	3017863	789624	4	58,128,343,54,	0,265,1438,3065,
#Deleted in new
chr6_GL000251v2_alt	3016531	3019203	chr6_GL000251v2_alt:3016531-3019203	0	-	3016531	3017863	789624	3	76,343,240,	0,1121,2432,
#Deleted in new
chr6_GL000251v2_alt	3018430	3018508	chr6_GL000251v2_alt:3018430-3018508	3	-	3018430	3018430	789624	1	78,	0,
#Deleted in new
chr6_GL000251v2_alt	3019633	3020461	chr6_GL000251v2_alt:3019633-3020461	3	+	3019633	3019633	789624	2	93,427,	0,401,
#Deleted in new
chr6_GL000251v2_alt	3019702	3020468	chr6_GL000251v2_alt:3019702-3020468	0	+	3019702	3019702	8553170	2	24,430,	0,336,
#Deleted in new
chr6_GL000251v2_alt	3021791	3023933	chr6_GL000251v2_alt:3021791-3023933	1	-	3022737	3023885	789624	3	1120,101,130,	0,1647,2012,
#Deleted in new
chr6_GL000251v2_alt	3021791	3023963	chr6_GL000251v2_alt:3021791-3023963	3	-	3022737	3023885	789624	3	1078,23,160,	0,1725,2012,
#Deleted in new
chr6_GL000251v2_alt	3022613	3024081	chr6_GL000251v2_alt:3022613-3024081	0	-	3022613	3022613	8553170	3	298,161,124,	0,765,1344,
#Deleted in new
chr6_GL000251v2_alt	3022746	3024174	chr6_GL000251v2_alt:3022746-3024174	0	-	3022746	3022746	8553170	3	165,101,217,	0,692,1211,
#Deleted in new
chr6_GL000251v2_alt	3024195	3036142	chr6_GL000251v2_alt:3024195-3036142	1	+	3025499	3035924	789624	4	104,277,222,808,	0,1292,10745,11139,
#Deleted in new
chr6_GL000251v2_alt	3024905	3036142	chr6_GL000251v2_alt:3024905-3036142	1	+	3025019	3035924	789624	4	171,277,222,808,	0,582,10035,10429,
#Deleted in new
chr6_GL000251v2_alt	3024937	3036142	chr6_GL000251v2_alt:3024937-3036142	1	+	3025019	3035924	789624	4	139,277,177,808,	0,550,10003,10397,
#Deleted in new
chr6_GL000251v2_alt	3024964	3035018	chr6_GL000251v2_alt:3024964-3035018	0	+	3024964	3024964	8553170	4	112,277,87,78,	0,523,9047,9976,
#Deleted in new
chr6_GL000251v2_alt	3024985	3035272	chr6_GL000251v2_alt:3024985-3035272	2	+	3025019	3035272	789624	3	91,277,332,	0,502,9955,
#Deleted in new
chr6_GL000251v2_alt	3049340	3051611	chr6_GL000251v2_alt:3049340-3051611	1	+	3050029	3050980	789624	4	249,108,106,1044,	0,680,874,1227,
#Deleted in new
chr6_GL000251v2_alt	3049556	3051611	chr6_GL000251v2_alt:3049556-3051611	0	+	3049556	3049556	8553170	3	33,300,1044,	0,464,1011,
#Deleted in new
chr6_GL000251v2_alt	3049569	3051611	chr6_GL000251v2_alt:3049569-3051611	3	+	3050029	3050980	789624	4	164,108,106,1044,	0,451,645,998,
#Deleted in new
chr6_GL000251v2_alt	3049580	3051611	chr6_GL000251v2_alt:3049580-3051611	0	+	3049580	3049580	8553170	3	153,300,1044,	0,440,987,
#Deleted in new
chr6_GL000251v2_alt	3052853	3055623	chr6_GL000251v2_alt:3052853-3055623	3	+	3053028	3054824	0	4	361,46,48,1221,	0,967,1200,1549,
#Deleted in new
chr6_GL000251v2_alt	3057841	3059712	chr6_GL000251v2_alt:3057841-3059712	3	-	3057995	3059704	0	4	609,72,46,170,	0,1004,1259,1701,
#Deleted in new
chr6_GL000251v2_alt	3057841	3059809	chr6_GL000251v2_alt:3057841-3059809	0	-	3057841	3057841	8553170	3	609,72,27,	0,1004,1941,
#Deleted in new
chr6_GL000251v2_alt	3057841	3059714	chr6_GL000251v2_alt:3057841-3059714	0	-	3057841	3057841	8553170	3	609,72,172,	0,1004,1701,
#Deleted in new
chr6_GL000251v2_alt	3063410	3066192	chr6_GL000251v2_alt:3063410-3066192	3	+	3064586	3065959	789624	4	192,119,23,392,	0,1076,1820,2390,
#Deleted in new
chr6_GL000251v2_alt	3063465	3066192	chr6_GL000251v2_alt:3063465-3066192	1	+	3064586	3065959	789624	5	137,119,93,23,392,	0,1021,1462,1765,2335,
#Deleted in new
chr6_GL000251v2_alt	3063480	3066192	chr6_GL000251v2_alt:3063480-3066192	0	+	3063480	3063480	8553170	2	122,1706,	0,1006,
#Deleted in new
chr6_GL000251v2_alt	3063503	3066192	chr6_GL000251v2_alt:3063503-3066192	1	+	3064586	3065868	789624	3	99,119,347,	0,983,2342,
#Deleted in new
chr6_GL000251v2_alt	3063503	3066192	chr6_GL000251v2_alt:3063503-3066192	1	+	3064586	3065868	789624	3	99,119,392,	0,983,2297,
#Deleted in new
chr6_GL000251v2_alt	3063506	3066192	chr6_GL000251v2_alt:3063506-3066192	1	+	3064586	3065959	789624	4	96,119,23,347,	0,980,1724,2339,
#Deleted in new
chr6_GL000251v2_alt	3063521	3066192	chr6_GL000251v2_alt:3063521-3066192	0	+	3063521	3063521	8553170	3	81,123,1355,	0,965,1316,
#Deleted in new
chr6_GL000251v2_alt	3063985	3066192	chr6_GL000251v2_alt:3063985-3066192	1	+	3064586	3065868	789624	4	109,119,93,413,	0,501,942,1794,
#Deleted in new
chr6_GL000251v2_alt	3064134	3066192	chr6_GL000251v2_alt:3064134-3066192	1	+	3064586	3065868	789624	3	92,119,392,	0,352,1666,
#Deleted in new
chr6_GL000251v2_alt	3064181	3065017	chr6_GL000251v2_alt:3064181-3065017	0	+	3064586	3065017	789624	3	45,119,90,	0,305,746,
#Deleted in new
chr6_GL000251v2_alt	3064295	3066192	chr6_GL000251v2_alt:3064295-3066192	1	+	3064586	3065868	789624	3	108,119,392,	0,191,1505,
#Deleted in new
chr6_GL000251v2_alt	3064308	3066192	chr6_GL000251v2_alt:3064308-3066192	1	+	3064586	3065868	789624	2	297,392,	0,1492,
#Deleted in new
chr6_GL000251v2_alt	3064318	3066192	chr6_GL000251v2_alt:3064318-3066192	1	+	3064586	3065959	789624	5	85,119,93,23,392,	0,168,609,912,1482,
#Deleted in new
chr6_GL000251v2_alt	3064352	3066192	chr6_GL000251v2_alt:3064352-3066192	1	+	3064586	3065959	789624	3	253,23,392,	0,878,1448,
#Deleted in new
chr6_GL000251v2_alt	3064366	3066192	chr6_GL000251v2_alt:3064366-3066192	1	+	3064586	3065959	789624	4	37,119,23,392,	0,120,864,1434,
#Deleted in new
chr6_GL000251v2_alt	3064372	3065128	chr6_GL000251v2_alt:3064372-3065128	0	+	3064586	3065128	789624	4	21,119,93,26,	0,114,555,730,
#Deleted in new
chr6_GL000251v2_alt	3064383	3066192	chr6_GL000251v2_alt:3064383-3066192	1	+	3064586	3065868	789624	4	20,119,93,392,	0,103,544,1417,
#Deleted in new
chr6_GL000251v2_alt	3064403	3066192	chr6_GL000251v2_alt:3064403-3066192	1	+	3064586	3065959	789624	4	202,93,23,347,	0,524,827,1442,
#Deleted in new
chr6_GL000251v2_alt	3064486	3066192	chr6_GL000251v2_alt:3064486-3066192	1	+	3064586	3065959	789624	4	119,93,23,413,	0,441,744,1293,
#Deleted in new
chr6_GL000251v2_alt	3064486	3066192	chr6_GL000251v2_alt:3064486-3066192	1	+	3064586	3065959	789624	3	119,23,413,	0,744,1293,
#Deleted in new
chr6_GL000251v2_alt	3064486	3066192	chr6_GL000251v2_alt:3064486-3066192	1	+	3064586	3065868	789624	2	119,413,	0,1293,
#Deleted in new
chr6_GL000251v2_alt	3064541	3066192	chr6_GL000251v2_alt:3064541-3066192	0	+	3064541	3064541	8553170	3	64,151,392,	0,561,1259,
#Deleted in new
chr6_GL000251v2_alt	3064590	3066192	chr6_GL000251v2_alt:3064590-3066192	0	+	3064590	3065868	789624	3	15,93,347,	0,337,1255,
#Deleted in new
chr6_GL000251v2_alt	3066177	3070268	chr6_GL000251v2_alt:3066177-3070268	1	-	3066476	3070004	0	4	337,108,345,307,	0,631,887,3784,
#Deleted in new
chr6_GL000251v2_alt	3066177	3070268	chr6_GL000251v2_alt:3066177-3070268	3	-	3066349	3070004	0	4	282,108,345,307,	0,631,887,3784,
#Deleted in new
chr6_GL000251v2_alt	3066177	3070095	chr6_GL000251v2_alt:3066177-3070095	0	-	3066177	3066177	8553170	4	337,108,118,22,	0,631,887,3896,
#Deleted in new
chr6_GL000251v2_alt	3066177	3070242	chr6_GL000251v2_alt:3066177-3070242	0	-	3066177	3066177	8553170	4	337,108,345,103,	0,631,887,3962,
#Deleted in new
chr6_GL000251v2_alt	3066557	3070268	chr6_GL000251v2_alt:3066557-3070268	1	-	3066594	3070004	0	4	114,108,345,307,	0,251,507,3404,
#Deleted in new
chr6_GL000251v2_alt	3066579	3070032	chr6_GL000251v2_alt:3066579-3070032	1	-	3066594	3070004	0	5	92,108,118,152,71,	0,229,485,678,3382,
#Deleted in new
chr6_GL000251v2_alt	3066579	3070032	chr6_GL000251v2_alt:3066579-3070032	0	-	3066901	3070004	789624	4	92,108,290,71,	0,229,540,3382,
#Deleted in new
chr6_GL000251v2_alt	3088371	3088645	chr6_GL000251v2_alt:3088371-3088645	7	-	3088371	3088371	16724991	1	274,	0,
#Deleted in new
chr6_GL000251v2_alt	3092472	3094310	chr6_GL000251v2_alt:3092472-3094310	3	+	3092618	3094189	0	6	171,62,67,42,163,206,	0,337,486,920,1160,1632,
#Deleted in new
chr6_GL000251v2_alt	3092505	3093629	chr6_GL000251v2_alt:3092505-3093629	0	+	3092505	3092505	8553170	3	77,62,671,	0,304,453,
#Deleted in new
chr6_GL000251v2_alt	3092515	3094310	chr6_GL000251v2_alt:3092515-3094310	0	+	3092515	3094189	789624	6	67,62,67,42,163,206,	0,294,443,877,1117,1589,
#Deleted in new
chr6_GL000251v2_alt	3092568	3094310	chr6_GL000251v2_alt:3092568-3094310	0	+	3092568	3092568	8553170	4	75,62,837,206,	0,241,390,1536,
#Deleted in new
chr6_GL000251v2_alt	3092914	3094310	chr6_GL000251v2_alt:3092914-3094310	0	+	3092914	3092914	8553170	3	111,163,206,	0,718,1190,
#Deleted in new
chr6_GL000251v2_alt	3093279	3094310	chr6_GL000251v2_alt:3093279-3094310	1	+	3093400	3094189	0	3	155,163,206,	0,353,825,
#Deleted in new
chr6_GL000251v2_alt	3098007	3115058	chr6_GL000251v2_alt:3098007-3115058	3	+	3100074	3114873	789624	31	139,175,178,100,73,144,152,80,143,91,217,475,191,298,211,1854,269,131,130,86,225,141,72,168,83,211,99,213,95,91,326,	0,2004,3010,3539,3728,4449,4738,5070,5298,6050,6260,7043,8422,8826,9870,10418,12658,13138,13515,13751,14032,14411,14673,14861,15246,15488,15789,16012,16321,16513,16725,
#Deleted in new
chr6_GL000251v2_alt	3098011	3104148	chr6_GL000251v2_alt:3098011-3104148	0	+	3098011	3098011	8553170	8	135,100,73,144,152,80,143,91,	0,3535,3724,4445,4734,5066,5294,6046,
#Deleted in new
chr6_GL000251v2_alt	3098012	3115058	chr6_GL000251v2_alt:3098012-3115058	1	+	3100074	3114873	789624	31	134,212,178,100,73,144,152,80,143,91,217,475,191,298,211,1854,269,131,130,86,225,141,72,168,83,211,99,213,95,91,326,	0,1962,3005,3534,3723,4444,4733,5065,5293,6045,6255,7038,8417,8821,9865,10413,12653,13133,13510,13746,14027,14406,14668,14856,15241,15483,15784,16007,16316,16508,16720,
#Deleted in new
chr6_GL000251v2_alt	3100363	3100495	chr6_GL000251v2_alt:3100363-3100495	3	+	3100363	3100363	789624	1	132,	0,
#Deleted in new
chr6_GL000251v2_alt	3102187	3102783	chr6_GL000251v2_alt:3102187-3102783	0	+	3102187	3102187	8553170	2	413,38,	0,558,
#Deleted in new
chr6_GL000251v2_alt	3103039	3104360	chr6_GL000251v2_alt:3103039-3104360	0	+	3103039	3103039	8553170	3	409,91,93,	0,1018,1228,
#Deleted in new
chr6_GL000251v2_alt	3105925	3107054	chr6_GL000251v2_alt:3105925-3107054	0	+	3105925	3105925	8553170	2	695,221,	0,908,
#Deleted in new
chr6_GL000251v2_alt	3111240	3112043	chr6_GL000251v2_alt:3111240-3112043	0	+	3111240	3111240	8553170	2	412,285,	0,518,
#Deleted in new
chr6_GL000251v2_alt	3111693	3112603	chr6_GL000251v2_alt:3111693-3112603	0	+	3111693	3111693	8553170	2	571,185,	0,725,
#Deleted in new
chr6_GL000251v2_alt	3112528	3112996	chr6_GL000251v2_alt:3112528-3112996	0	+	3112528	3112528	8553170	2	31,316,	0,152,
#Deleted in new
chr6_GL000251v2_alt	3112646	3113537	chr6_GL000251v2_alt:3112646-3113537	0	+	3112646	3112646	8553170	2	690,42,	0,849,
#Deleted in new
chr6_GL000251v2_alt	3112662	3114098	chr6_GL000251v2_alt:3112662-3114098	0	+	3112662	3112662	8553170	4	90,468,211,302,	0,206,833,1134,
#Deleted in new
chr6_GL000251v2_alt	3113533	3115058	chr6_GL000251v2_alt:3113533-3115058	0	+	3113533	3113533	8553170	5	173,99,213,95,538,	0,263,486,795,987,
#Deleted in new
chr6_GL000251v2_alt	3113822	3115058	chr6_GL000251v2_alt:3113822-3115058	0	+	3113822	3113822	8553170	3	73,404,538,	0,197,698,
#Deleted in new
chr6_GL000251v2_alt	3114121	3115058	chr6_GL000251v2_alt:3114121-3115058	0	+	3114121	3114121	8553170	3	302,91,326,	0,399,611,
#Deleted in new
chr6_GL000251v2_alt	3116309	3129995	chr6_GL000251v2_alt:3116309-3129995	1	-	3116416	3129053	0	25	203,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,282,	0,477,1176,1362,1622,1769,2081,2297,2516,2753,3089,3806,4869,5061,5504,5925,6386,7373,8570,9657,9891,10179,10490,12636,13404,
#Deleted in new
chr6_GL000251v2_alt	3116309	3129683	chr6_GL000251v2_alt:3116309-3129683	1	-	3116416	3129053	0	25	203,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,147,	0,477,1176,1362,1622,1769,2081,2297,2516,2753,3089,3806,4869,5061,5504,5925,6386,7373,8570,9657,9891,10179,10490,12636,13227,
#Deleted in new
chr6_GL000251v2_alt	3116309	3129925	chr6_GL000251v2_alt:3116309-3129925	3	-	3116416	3129053	0	25	203,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,254,75,54,197,118,121,236,	0,477,1176,1362,1622,1769,2081,2297,2516,2753,3089,3806,4869,5061,5504,5925,6386,7373,8570,9657,9891,10179,10490,12636,13380,
#Deleted in new
chr6_GL000251v2_alt	3116309	3117826	chr6_GL000251v2_alt:3116309-3117826	0	-	3116309	3116309	8553170	4	203,147,108,155,	0,477,1176,1362,
#Deleted in new
chr6_GL000251v2_alt	3116309	3117075	chr6_GL000251v2_alt:3116309-3117075	0	-	3116309	3116309	8553170	2	203,289,	0,477,
#Deleted in new
chr6_GL000251v2_alt	3116310	3129990	chr6_GL000251v2_alt:3116310-3129990	1	-	3116416	3129053	0	24	202,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,277,	0,1175,1361,1621,1768,2080,2296,2515,2752,3088,3805,4868,5060,5503,5924,6385,7372,8569,9656,9890,10178,10489,12635,13403,
#Deleted in new
chr6_GL000251v2_alt	3116310	3129990	chr6_GL000251v2_alt:3116310-3129990	1	-	3116416	3129053	0	23	202,108,60,147,125,103,54,170,189,15,85,113,78,253,198,130,236,75,54,197,118,121,277,	0,1175,1621,1768,2080,2296,2515,2752,3088,4077,4868,5060,5503,5924,6385,7372,8569,9656,9890,10178,10489,12635,13403,
#Deleted in new
chr6_GL000251v2_alt	3116416	3118224	chr6_GL000251v2_alt:3116416-3118224	0	-	3116419	3118224	789624	4	96,108,60,146,	0,1069,1515,1662,
#Deleted in new
chr6_GL000251v2_alt	3116416	3118515	chr6_GL000251v2_alt:3116416-3118515	0	-	3116419	3118515	789624	6	96,108,144,60,147,125,	0,1069,1255,1515,1662,1974,
#Deleted in new
chr6_GL000251v2_alt	3118111	3119432	chr6_GL000251v2_alt:3118111-3119432	0	-	3118111	3118111	8553170	3	768,170,34,	0,951,1287,
#Deleted in new
chr6_GL000251v2_alt	3119134	3121605	chr6_GL000251v2_alt:3119134-3121605	0	-	3119134	3119134	8553170	5	98,292,287,88,235,	0,264,981,2044,2236,
#Deleted in new
chr6_GL000251v2_alt	3119505	3129968	chr6_GL000251v2_alt:3119505-3129968	0	-	3119505	3129053	789624	16	185,287,88,113,108,78,253,198,130,236,75,54,197,118,121,166,	0,610,1673,1865,2090,2308,2729,3190,4177,5374,6461,6695,6983,7294,9440,10297,
#Deleted in new
chr6_GL000251v2_alt	3119970	3121489	chr6_GL000251v2_alt:3119970-3121489	0	-	3119970	3119970	8553170	3	432,88,119,	0,1208,1400,
#Deleted in new
chr6_GL000251v2_alt	3120118	3122358	chr6_GL000251v2_alt:3120118-3122358	0	-	3120118	3122358	789624	5	284,88,113,105,124,	0,1060,1252,1695,2116,
#Deleted in new
chr6_GL000251v2_alt	3120156	3122779	chr6_GL000251v2_alt:3120156-3122779	0	-	3120156	3122779	789624	7	246,88,113,78,96,31,84,	0,1022,1214,1657,2078,2300,2539,
#Deleted in new
chr6_GL000251v2_alt	3120245	3122850	chr6_GL000251v2_alt:3120245-3122850	0	-	3120245	3120245	8553170	4	157,88,253,155,	0,933,1989,2450,
#Deleted in new
chr6_GL000251v2_alt	3120399	3122792	chr6_GL000251v2_alt:3120399-3122792	0	-	3120399	3122792	789624	5	3,88,113,253,97,	0,779,971,1835,2296,
#Deleted in new
chr6_GL000251v2_alt	3121605	3129676	chr6_GL000251v2_alt:3121605-3129676	0	-	3121605	3129053	789624	12	98,78,253,198,130,236,75,54,197,118,121,152,	0,208,629,1090,2077,3274,4361,4595,4883,5194,7340,7919,
#Deleted in new
chr6_GL000251v2_alt	3121782	3122474	chr6_GL000251v2_alt:3121782-3122474	0	-	3121782	3121782	8553170	2	109,240,	0,452,
#Deleted in new
chr6_GL000251v2_alt	3124879	3129648	chr6_GL000251v2_alt:3124879-3129648	0	-	3124879	3129053	789624	6	236,75,197,118,121,112,	0,1087,1609,1920,4066,4657,
#Deleted in new
chr6_GL000251v2_alt	3124879	3129448	chr6_GL000251v2_alt:3124879-3129448	0	-	3124879	3129053	789624	7	236,75,54,197,118,121,79,	0,1087,1321,1609,1920,4066,4490,
#Deleted in new
chr6_GL000251v2_alt	3124879	3129210	chr6_GL000251v2_alt:3124879-3129210	0	-	3124879	3129053	789624	6	236,75,197,118,121,19,	0,1087,1609,1920,4066,4312,
#Deleted in new
chr6_GL000251v2_alt	3124881	3129443	chr6_GL000251v2_alt:3124881-3129443	0	-	3124881	3129053	789624	7	234,75,54,197,118,121,252,	0,1085,1319,1607,1918,4064,4310,
#Deleted in new
chr6_GL000251v2_alt	3124882	3129938	chr6_GL000251v2_alt:3124882-3129938	0	-	3124882	3129053	789624	6	233,75,197,118,121,249,	0,1084,1606,1917,4063,4807,
#Deleted in new
chr6_GL000251v2_alt	3124888	3129265	chr6_GL000251v2_alt:3124888-3129265	0	-	3124888	3129053	789624	7	227,75,54,197,118,121,110,	0,1078,1312,1600,1911,4057,4267,
#Deleted in new
chr6_GL000251v2_alt	3124892	3129957	chr6_GL000251v2_alt:3124892-3129957	0	-	3124892	3129053	789624	7	223,75,54,197,118,121,268,	0,1074,1308,1596,1907,4053,4797,
#Deleted in new
chr6_GL000251v2_alt	3124968	3129613	chr6_GL000251v2_alt:3124968-3129613	0	-	3124968	3129053	789624	6	147,75,197,118,121,89,	0,998,1520,1831,3977,4556,
#Deleted in new
chr6_GL000251v2_alt	3124987	3129935	chr6_GL000251v2_alt:3124987-3129935	0	-	3124987	3129053	789624	7	146,75,54,197,118,121,133,	0,979,1213,1501,1812,3958,4815,
#Deleted in new
chr6_GL000251v2_alt	3124994	3129735	chr6_GL000251v2_alt:3124994-3129735	0	-	3124994	3129053	789624	6	121,75,197,118,121,22,	0,972,1494,1805,3951,4719,
#Deleted in new
chr6_GL000251v2_alt	3125076	3129269	chr6_GL000251v2_alt:3125076-3129269	0	-	3125076	3129053	789624	6	39,75,54,197,118,324,	0,890,1124,1412,1723,3869,
#Deleted in new
chr6_GL000251v2_alt	3126017	3129612	chr6_GL000251v2_alt:3126017-3129612	0	-	3126017	3126017	8553170	6	24,54,219,118,121,76,	0,183,471,782,2928,3519,
#Deleted in new
chr6_GL000251v2_alt	3126201	3129405	chr6_GL000251v2_alt:3126201-3129405	0	-	3126201	3129053	789624	5	53,197,118,121,55,	0,287,598,2744,3149,
#Deleted in new
chr6_GL000251v2_alt	3126519	3129928	chr6_GL000251v2_alt:3126519-3129928	0	-	3126519	3126519	8553170	4	188,118,121,215,	0,280,2426,3194,
#Deleted in new
chr6_GL000251v2_alt	3129705	3135371	chr6_GL000251v2_alt:3129705-3135371	1	+	3133862	3135077	789624	5	136,155,74,99,458,	0,4055,4808,4963,5208,
#Deleted in new
chr6_GL000251v2_alt	3129706	3135499	chr6_GL000251v2_alt:3129706-3135499	3	+	3133862	3135378	0	6	135,155,74,99,99,147,	0,4054,4807,4962,5207,5646,
#Deleted in new
chr6_GL000251v2_alt	3133182	3135499	chr6_GL000251v2_alt:3133182-3135499	1	+	3133255	3135378	0	6	187,155,74,99,99,147,	0,578,1331,1486,1731,2170,
#Deleted in new
chr6_GL000251v2_alt	3135586	3138059	chr6_GL000251v2_alt:3135586-3138059	3	-	3136352	3137237	789624	1	2473,	0,
#Deleted in new
chr6_GL000251v2_alt	3135617	3138009	chr6_GL000251v2_alt:3135617-3138009	3	+	3135617	3135617	8553170	2	351,320,	0,2072,
#Deleted in new
chr6_GL000251v2_alt	3138518	3143574	chr6_GL000251v2_alt:3138518-3143574	3	-	3139555	3141769	789624	4	1482,725,163,423,	0,2625,3613,4633,
#Deleted in new
chr6_GL000251v2_alt	3139365	3142921	chr6_GL000251v2_alt:3139365-3142921	1	-	3139555	3141769	789624	4	635,728,163,72,	0,1778,2766,3484,
#Deleted in new
chr6_GL000251v2_alt	3139365	3143152	chr6_GL000251v2_alt:3139365-3143152	1	-	3139555	3141769	789624	4	635,728,163,288,	0,1778,2766,3499,
#Deleted in new
chr6_GL000251v2_alt	3139365	3142681	chr6_GL000251v2_alt:3139365-3142681	1	-	3139555	3141769	789624	3	635,725,550,	0,1778,2766,
#Deleted in new
chr6_GL000251v2_alt	3139365	3143141	chr6_GL000251v2_alt:3139365-3143141	1	-	3139555	3141769	789624	4	635,725,163,277,	0,1778,2766,3499,
#Deleted in new
chr6_GL000251v2_alt	3140578	3140692	chr6_GL000251v2_alt:3140578-3140692	3	+	3140578	3140578	8553170	1	114,	0,
#Deleted in new
chr6_GL000251v2_alt	3141173	3143088	chr6_GL000251v2_alt:3141173-3143088	0	-	3141173	3141769	789624	3	695,67,224,	0,958,1691,
#Deleted in new
chr6_GL000251v2_alt	3141275	3142733	chr6_GL000251v2_alt:3141275-3142733	0	-	3141275	3141769	789624	3	596,163,43,	0,856,1415,
#Deleted in new
chr6_GL000251v2_alt	3141313	3142481	chr6_GL000251v2_alt:3141313-3142481	0	-	3141313	3141769	789624	3	558,163,101,	0,818,1067,
#Deleted in new
chr6_GL000251v2_alt	3141448	3143125	chr6_GL000251v2_alt:3141448-3143125	0	-	3141448	3141769	789624	3	423,67,261,	0,683,1416,
#Deleted in new
chr6_GL000251v2_alt	3141500	3142476	chr6_GL000251v2_alt:3141500-3142476	0	-	3141500	3141769	789624	3	368,163,96,	0,631,880,
#Deleted in new
chr6_GL000251v2_alt	3142526	3147361	chr6_GL000251v2_alt:3142526-3147361	1	+	3142738	3147217	789624	7	258,83,103,116,76,190,235,	0,1585,2632,3303,3861,4083,4600,
#Deleted in new
chr6_GL000251v2_alt	3143170	3149573	chr6_GL000251v2_alt:3143170-3149573	1	+	3144122	3149573	789624	5	329,83,103,77,234,	0,941,1988,2659,6169,
#Deleted in new
chr6_GL000251v2_alt	3143170	3149573	chr6_GL000251v2_alt:3143170-3149573	1	+	3144122	3149573	789624	7	329,83,103,116,76,129,419,	0,941,1988,2659,3217,5276,5984,
#Deleted in new
chr6_GL000251v2_alt	3143354	3147361	chr6_GL000251v2_alt:3143354-3147361	3	+	3144122	3147217	0	7	145,83,103,116,76,190,235,	0,757,1804,2475,3033,3255,3772,
#Deleted in new
chr6_GL000251v2_alt	3143371	3147634	chr6_GL000251v2_alt:3143371-3147634	0	+	3143371	3143371	8553170	5	128,83,103,970,508,	0,740,1787,2458,3755,
#Deleted in new
chr6_GL000251v2_alt	3143377	3145532	chr6_GL000251v2_alt:3143377-3145532	0	+	3143377	3143377	8553170	3	122,83,374,	0,734,1781,
#Deleted in new
chr6_GL000251v2_alt	3143384	3146755	chr6_GL000251v2_alt:3143384-3146755	0	+	3143384	3143384	8553170	5	115,83,103,116,368,	0,727,1774,2445,3003,
#Deleted in new
chr6_GL000251v2_alt	3143388	3147361	chr6_GL000251v2_alt:3143388-3147361	0	+	3143388	3143388	8553170	7	111,83,121,116,76,190,235,	0,723,1752,2441,2999,3221,3738,
#Deleted in new
chr6_GL000251v2_alt	3143392	3150837	chr6_GL000251v2_alt:3143392-3150837	1	+	3144122	3149155	789624	8	107,83,103,116,76,190,129,1683,	0,719,1766,2437,2995,3217,5054,5762,
#Deleted in new
chr6_GL000251v2_alt	3143582	3147361	chr6_GL000251v2_alt:3143582-3147361	1	+	3144122	3147217	0	7	105,83,103,116,76,190,235,	0,529,1576,2247,2805,3027,3544,
#Deleted in new
chr6_GL000251v2_alt	3143645	3147361	chr6_GL000251v2_alt:3143645-3147361	1	+	3144122	3147217	0	7	133,83,103,116,76,190,235,	0,466,1513,2184,2742,2964,3481,
#Deleted in new
chr6_GL000251v2_alt	3144110	3149637	chr6_GL000251v2_alt:3144110-3149637	1	+	3144122	3149155	789624	7	84,103,116,76,190,129,483,	0,1048,1719,2277,2499,4336,5044,
#Deleted in new
chr6_GL000251v2_alt	3146408	3150837	chr6_GL000251v2_alt:3146408-3150837	0	+	3146408	3149573	789624	4	55,36,129,1683,	0,1855,2038,2746,
#Deleted in new
chr6_GL000251v2_alt	3147669	3150837	chr6_GL000251v2_alt:3147669-3150837	0	+	3147669	3147669	8553170	2	906,1683,	0,1485,
#Deleted in new
chr6_GL000251v2_alt	3148241	3150837	chr6_GL000251v2_alt:3148241-3150837	3	+	3148241	3149573	789624	3	58,129,1683,	0,205,913,
#Deleted in new
chr6_GL000251v2_alt	3153974	3161330	chr6_GL000251v2_alt:3153974-3161330	0	-	3154247	3161330	789624	4	437,168,292,53,	0,2417,6365,7303,
#Deleted in new
chr6_GL000251v2_alt	3153974	3157668	chr6_GL000251v2_alt:3153974-3157668	3	-	3154247	3157664	789624	3	437,168,125,	0,2417,3569,
#Deleted in new
chr6_GL000251v2_alt	3153974	3157655	chr6_GL000251v2_alt:3153974-3157655	0	-	3153974	3153974	8553170	2	437,1264,	0,2417,
#Deleted in new
chr6_GL000251v2_alt	3153974	3161330	chr6_GL000251v2_alt:3153974-3161330	0	-	3153974	3153974	8553170	4	437,168,172,53,	0,2417,4546,7303,
#Deleted in new
chr6_GL000251v2_alt	3153974	3157655	chr6_GL000251v2_alt:3153974-3157655	0	-	3153974	3153974	8553170	3	437,168,206,	0,2417,3475,
#Deleted in new
chr6_GL000251v2_alt	3153974	3160500	chr6_GL000251v2_alt:3153974-3160500	0	-	3153974	3153974	8553170	6	437,207,168,159,212,161,	0,1738,2417,4546,4962,6365,
#Deleted in new
chr6_GL000251v2_alt	3153974	3158767	chr6_GL000251v2_alt:3153974-3158767	0	-	3153974	3153974	8553170	3	437,168,247,	0,2417,4546,
#Deleted in new
chr6_GL000251v2_alt	3158638	3159251	chr6_GL000251v2_alt:3158638-3159251	0	-	3158638	3158638	8553170	2	54,315,	0,298,
#Deleted in new
chr6_GL000251v2_alt	3164238	3180362	chr6_GL000251v2_alt:3164238-3180362	1	-	3164501	3180057	789624	18	347,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,462,	0,549,693,875,1092,1300,1774,2066,2632,3129,3590,4630,4855,6078,6410,9998,13994,15662,
#Deleted in new
chr6_GL000251v2_alt	3164244	3180705	chr6_GL000251v2_alt:3164244-3180705	3	-	3164501	3180699	789624	20	341,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,67,57,267,	0,543,687,869,1086,1294,1768,2060,2626,3123,3584,4624,4849,6072,6404,9992,13988,14320,15118,16194,
#Deleted in new
chr6_GL000251v2_alt	3164244	3180362	chr6_GL000251v2_alt:3164244-3180362	0	-	3164244	3164244	789624	20	341,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,67,57,462,	0,543,687,869,1086,1294,1768,2060,2626,3123,3584,4624,4849,6072,6404,9992,13988,14320,15118,15656,
#Deleted in new
chr6_GL000251v2_alt	3164244	3165679	chr6_GL000251v2_alt:3164244-3165679	0	-	3164244	3164244	8553170	5	341,47,99,77,349,	0,543,687,869,1086,
#Deleted in new
chr6_GL000251v2_alt	3164244	3180629	chr6_GL000251v2_alt:3164244-3180629	0	-	3164244	3164244	789624	19	341,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,57,191,	0,543,687,869,1086,1294,1768,2060,2626,3123,3584,4624,4849,6072,6404,9992,13988,15118,16194,
#Deleted in new
chr6_GL000251v2_alt	3164244	3167892	chr6_GL000251v2_alt:3164244-3167892	0	-	3164244	3164244	8553170	10	341,47,99,77,63,57,397,124,50,64,	0,543,687,869,1086,1294,1768,2626,3123,3584,
#Deleted in new
chr6_GL000251v2_alt	3164676	3165611	chr6_GL000251v2_alt:3164676-3165611	0	-	3164676	3164676	8553170	4	158,99,77,281,	0,255,437,654,
#Deleted in new
chr6_GL000251v2_alt	3164864	3165593	chr6_GL000251v2_alt:3164864-3165593	0	-	3164864	3164864	8553170	3	166,77,263,	0,249,466,
#Deleted in new
chr6_GL000251v2_alt	3164942	3167535	chr6_GL000251v2_alt:3164942-3167535	0	-	3164942	3164942	8553170	8	88,77,63,57,64,105,124,168,	0,171,388,596,1070,1362,1928,2425,
#Deleted in new
chr6_GL000251v2_alt	3165062	3168936	chr6_GL000251v2_alt:3165062-3168936	0	-	3165062	3165062	8553170	8	128,265,64,105,124,50,64,68,	0,268,950,1242,1808,2305,2766,3806,
#Deleted in new
chr6_GL000251v2_alt	3166304	3180622	chr6_GL000251v2_alt:3166304-3180622	0	-	3166304	3166304	8553170	11	105,124,50,64,102,115,123,74,86,87,184,	0,566,1063,1524,2564,2789,4012,4344,7932,11928,14134,
#Deleted in new
chr6_GL000251v2_alt	3167845	3180155	chr6_GL000251v2_alt:3167845-3180155	0	-	3167845	3180057	789624	8	47,102,115,123,74,86,87,255,	0,1023,1248,2471,2803,6391,10387,12055,
#Deleted in new
chr6_GL000251v2_alt	3168735	3170346	chr6_GL000251v2_alt:3168735-3170346	0	-	3168735	3168735	8553170	3	235,115,30,	0,358,1581,
#Deleted in new
chr6_GL000251v2_alt	3168878	3169584	chr6_GL000251v2_alt:3168878-3169584	0	-	3168878	3168878	8553170	2	92,491,	0,215,
#Deleted in new
chr6_GL000251v2_alt	3184174	3187885	chr6_GL000251v2_alt:3184174-3187885	3	+	3184196	3187881	789624	6	74,330,264,156,67,29,	0,573,986,3141,3467,3682,
#Deleted in new
chr6_GL000251v2_alt	3184193	3195206	chr6_GL000251v2_alt:3184193-3195206	3	+	3184196	3195092	789624	6	55,330,264,156,123,338,	0,554,967,3122,8592,10675,
#Deleted in new
chr6_GL000251v2_alt	3189619	3191096	chr6_GL000251v2_alt:3189619-3191096	0	-	3189619	3189619	8553170	3	206,126,52,	0,328,1425,
#Deleted in new
chr6_GL000251v2_alt	3189619	3191096	chr6_GL000251v2_alt:3189619-3191096	3	-	3189624	3191096	789624	3	205,126,52,	0,328,1425,
#Deleted in new
chr6_GL000251v2_alt	3189624	3191096	chr6_GL000251v2_alt:3189624-3191096	1	-	3189822	3191096	789624	3	221,126,52,	0,323,1420,
#Deleted in new
chr6_GL000251v2_alt	3189624	3191096	chr6_GL000251v2_alt:3189624-3191096	1	-	3189822	3191096	789624	2	449,52,	0,1420,
#Deleted in new
chr6_GL000251v2_alt	3192639	3195092	chr6_GL000251v2_alt:3192639-3195092	1	+	3192639	3195092	789624	3	55,123,224,	0,146,2229,
#Deleted in new
chr6_GL000251v2_alt	3192639	3195092	chr6_GL000251v2_alt:3192639-3195092	0	+	3192639	3195092	789624	3	55,123,345,	0,146,2108,
#Deleted in new
chr6_GL000251v2_alt	3192639	3195092	chr6_GL000251v2_alt:3192639-3195092	0	+	3192639	3192639	8553170	2	269,224,	0,2229,
#Deleted in new
chr6_GL000251v2_alt	3195881	3203998	chr6_GL000251v2_alt:3195881-3203998	0	+	3195881	3195881	8553170	7	90,135,43,348,91,258,1741,	0,4410,4808,5045,5548,5993,6376,
#Deleted in new
chr6_GL000251v2_alt	3195935	3199133	chr6_GL000251v2_alt:3195935-3199133	3	-	3196383	3198967	789624	3	663,111,218,	0,1445,2980,
#Deleted in new
chr6_GL000251v2_alt	3195935	3198967	chr6_GL000251v2_alt:3195935-3198967	1	-	3196383	3196593	789624	4	663,111,111,52,	0,1445,2305,2980,
#Deleted in new
chr6_GL000251v2_alt	3200660	3203998	chr6_GL000251v2_alt:3200660-3203998	3	+	3200671	3202331	789624	6	72,348,91,41,99,1741,	0,266,769,1214,1373,1597,
#Deleted in new
chr6_GL000251v2_alt	3200671	3203998	chr6_GL000251v2_alt:3200671-3203998	1	+	3200671	3202331	789624	4	61,348,99,1741,	0,255,1362,1586,
#Deleted in new
chr6_GL000251v2_alt	3200671	3203998	chr6_GL000251v2_alt:3200671-3203998	1	+	3200671	3202362	789624	5	61,348,41,99,1741,	0,255,1203,1362,1586,
#Deleted in new
chr6_GL000251v2_alt	3200671	3203998	chr6_GL000251v2_alt:3200671-3203998	1	+	3200671	3202362	789624	4	61,348,80,1741,	0,255,1381,1586,
#Deleted in new
chr6_GL000251v2_alt	3200671	3203998	chr6_GL000251v2_alt:3200671-3203998	1	+	3200671	3202362	789624	6	61,348,91,41,80,1741,	0,255,758,1203,1381,1586,
#Deleted in new
chr6_GL000251v2_alt	3200671	3203998	chr6_GL000251v2_alt:3200671-3203998	0	+	3200671	3200671	8553170	5	61,348,91,41,1965,	0,255,758,1203,1362,
#Deleted in new
chr6_GL000251v2_alt	3200671	3203998	chr6_GL000251v2_alt:3200671-3203998	0	+	3200671	3200671	8553170	5	61,348,91,258,1741,	0,255,758,1203,1586,
#Deleted in new
chr6_GL000251v2_alt	3204325	3207905	chr6_GL000251v2_alt:3204325-3207905	3	-	3204524	3206449	789624	7	316,150,120,74,100,361,567,	0,505,1135,1413,1608,1827,3013,
#Deleted in new
chr6_GL000251v2_alt	3204325	3207551	chr6_GL000251v2_alt:3204325-3207551	1	-	3204524	3206449	789624	7	316,150,120,74,100,357,213,	0,505,1135,1413,1608,1827,3013,
#Deleted in new
chr6_GL000251v2_alt	3204325	3206165	chr6_GL000251v2_alt:3204325-3206165	0	-	3204484	3206165	789624	6	316,101,120,74,100,13,	0,505,1135,1413,1608,1827,
#Deleted in new
chr6_GL000251v2_alt	3204325	3207080	chr6_GL000251v2_alt:3204325-3207080	1	-	3204524	3206449	789624	6	316,150,120,74,100,928,	0,505,1135,1413,1608,1827,
#Deleted in new
chr6_GL000251v2_alt	3204325	3206795	chr6_GL000251v2_alt:3204325-3206795	0	-	3204325	3204325	8553170	4	316,150,573,643,	0,505,1135,1827,
#Deleted in new
chr6_GL000251v2_alt	3204325	3207515	chr6_GL000251v2_alt:3204325-3207515	0	-	3204325	3204325	8553170	6	316,150,120,74,100,177,	0,505,1135,1413,1608,3013,
#Deleted in new
chr6_GL000251v2_alt	3204325	3207550	chr6_GL000251v2_alt:3204325-3207550	0	-	3204325	3204325	8553170	5	316,150,120,100,212,	0,505,1135,1608,3013,
#Deleted in new
chr6_GL000251v2_alt	3204862	3207084	chr6_GL000251v2_alt:3204862-3207084	0	-	3204862	3206449	789624	6	118,120,74,100,361,114,	0,598,876,1071,1290,2108,
#Deleted in new
chr6_GL000251v2_alt	3204893	3206789	chr6_GL000251v2_alt:3204893-3206789	0	-	3204893	3206449	789624	6	87,120,74,100,361,140,	0,567,845,1040,1259,1756,
#Deleted in new
chr6_GL000251v2_alt	3205468	3207533	chr6_GL000251v2_alt:3205468-3207533	0	-	3205468	3205468	8553170	3	565,361,195,	0,684,1870,
#Deleted in new
chr6_GL000251v2_alt	3207868	3213864	chr6_GL000251v2_alt:3207868-3213864	1	-	3208129	3213592	0	7	423,182,107,126,110,151,28,	0,1636,2985,3255,3573,5685,5968,
#Deleted in new
chr6_GL000251v2_alt	3207868	3217043	chr6_GL000251v2_alt:3207868-3217043	3	-	3208129	3213592	0	8	423,182,107,126,110,89,125,35,	0,1636,2985,3255,3573,5685,8675,9140,
#Deleted in new
chr6_GL000251v2_alt	3207868	3214610	chr6_GL000251v2_alt:3207868-3214610	1	-	3208129	3213592	0	7	423,182,107,126,110,89,523,	0,1636,2985,3255,3573,5685,6219,
#Deleted in new
chr6_GL000251v2_alt	3207868	3213859	chr6_GL000251v2_alt:3207868-3213859	1	-	3208129	3213592	0	6	423,182,107,126,110,306,	0,1636,2985,3255,3573,5685,
#Deleted in new
chr6_GL000251v2_alt	3207870	3213837	chr6_GL000251v2_alt:3207870-3213837	1	-	3208129	3213592	0	7	421,182,107,126,110,89,63,	0,1634,2983,3253,3571,5683,5904,
#Deleted in new
chr6_GL000251v2_alt	3217270	3221499	chr6_GL000251v2_alt:3217270-3221499	0	+	3217746	3221499	789624	8	72,27,160,124,81,63,122,45,	0,203,463,1172,2871,3102,3898,4184,
#Deleted in new
chr6_GL000251v2_alt	3217276	3239933	chr6_GL000251v2_alt:3217276-3239933	3	+	3217746	3239788	789624	25	66,160,124,81,63,122,110,36,83,46,139,63,129,73,110,81,88,190,127,150,75,144,138,74,257,	0,457,1166,2865,3096,3892,4178,4534,5222,7373,13289,13555,18145,18528,18746,19077,19405,19766,20070,20670,21168,21452,21798,22092,22400,
#Deleted in new
chr6_GL000251v2_alt	3217279	3239933	chr6_GL000251v2_alt:3217279-3239933	1	+	3217746	3239788	789624	25	221,160,124,81,63,122,110,36,83,46,139,63,129,73,110,81,88,190,127,150,75,144,138,74,257,	0,454,1163,2862,3093,3889,4175,4531,5219,7370,13286,13552,18142,18525,18743,19074,19402,19763,20067,20667,21165,21449,21795,22089,22397,
#Deleted in new
chr6_GL000251v2_alt	3217296	3220745	chr6_GL000251v2_alt:3217296-3220745	0	+	3217296	3217296	8553170	5	46,160,124,81,373,	0,437,1146,2845,3076,
#Deleted in new
chr6_GL000251v2_alt	3217299	3242109	chr6_GL000251v2_alt:3217299-3242109	3	+	3217746	3239788	789624	29	43,160,124,81,63,122,161,36,83,46,139,63,129,73,110,81,88,190,127,150,75,144,138,74,749,141,96,90,417,	0,434,1143,2842,3073,3869,4104,4511,5199,7350,13266,13532,18122,18505,18723,19054,19382,19743,20047,20647,21145,21429,21775,22069,22377,23372,24021,24223,24393,
#Deleted in new
chr6_GL000251v2_alt	3217300	3239933	chr6_GL000251v2_alt:3217300-3239933	1	+	3217746	3239788	789624	25	42,160,124,81,63,122,110,36,83,46,139,63,129,73,110,81,88,190,127,150,78,144,138,74,257,	0,433,1142,2841,3072,3868,4154,4510,5198,7349,13265,13531,18121,18504,18722,19053,19381,19742,20046,20646,21141,21428,21774,22068,22376,
#Deleted in new
chr6_GL000251v2_alt	3217300	3239933	chr6_GL000251v2_alt:3217300-3239933	1	+	3217746	3239788	789624	25	42,160,124,81,63,122,161,36,83,46,139,63,129,73,110,81,88,190,127,150,75,144,48,74,257,	0,433,1142,2841,3072,3868,4103,4510,5198,7349,13265,13531,18121,18504,18722,19053,19381,19742,20046,20646,21144,21428,21774,22068,22376,
#Deleted in new
chr6_GL000251v2_alt	3217300	3235865	chr6_GL000251v2_alt:3217300-3235865	0	+	3217300	3217300	8553170	13	42,160,124,81,63,122,122,36,46,139,63,129,61,	0,433,1142,2841,3072,3868,4142,4510,7349,13265,13531,18121,18504,
#Deleted in new
chr6_GL000251v2_alt	3218525	3231305	chr6_GL000251v2_alt:3218525-3231305	0	+	3218525	3218525	8553170	9	41,81,63,122,110,36,46,139,474,	0,1616,1847,2643,2929,3285,6124,12040,12306,
#Deleted in new
chr6_GL000251v2_alt	3221242	3236748	chr6_GL000251v2_alt:3221242-3236748	0	+	3221242	3236748	789624	12	48,110,36,83,46,139,63,129,88,110,81,67,	0,212,568,1256,3407,9323,9589,14179,14547,14780,15111,15439,
#Deleted in new
chr6_GL000251v2_alt	3228756	3236391	chr6_GL000251v2_alt:3228756-3236391	0	+	3228756	3228756	8553170	6	159,139,63,129,110,38,	0,1809,2075,6665,7266,7597,
#Deleted in new
chr6_GL000251v2_alt	3233848	3239933	chr6_GL000251v2_alt:3233848-3239933	1	+	3235385	3239788	789624	14	325,872,73,110,81,88,190,127,150,75,144,138,74,257,	0,830,1956,2174,2505,2833,3194,3498,4098,4596,4880,5226,5520,5828,
#Deleted in new
chr6_GL000251v2_alt	3234207	3234310	chr6_GL000251v2_alt:3234207-3234310	3	-	3234207	3234207	8553170	1	103,	0,
#Deleted in new
chr6_GL000251v2_alt	3235451	3236759	chr6_GL000251v2_alt:3235451-3236759	0	+	3235451	3235451	8553170	4	99,73,110,406,	0,353,571,902,
#Deleted in new
chr6_GL000251v2_alt	3236701	3242109	chr6_GL000251v2_alt:3236701-3242109	0	+	3236701	3239045	789624	14	68,190,127,150,75,144,116,74,151,379,141,96,90,417,	0,341,645,1245,1743,2027,2305,2667,2975,3345,3970,4619,4821,4991,
#Deleted in new
chr6_GL000251v2_alt	3237173	3239933	chr6_GL000251v2_alt:3237173-3239933	0	+	3237173	3239187	789624	8	59,127,75,144,31,90,74,257,	0,173,1271,1555,1833,1949,2195,2503,
#Deleted in new
chr6_GL000251v2_alt	3237976	3240401	chr6_GL000251v2_alt:3237976-3240401	0	+	3237976	3237976	8553170	7	120,75,144,48,74,151,94,	0,468,752,1098,1392,1700,2331,
#Deleted in new
chr6_GL000251v2_alt	3238468	3239933	chr6_GL000251v2_alt:3238468-3239933	0	+	3238468	3239788	789624	5	51,144,90,74,257,	0,260,654,900,1208,
#Deleted in new
chr6_GL000251v2_alt	3239179	3239933	chr6_GL000251v2_alt:3239179-3239933	0	+	3239179	3239179	8553170	2	263,257,	0,497,
#Deleted in new
chr6_GL000251v2_alt	3239700	3242109	chr6_GL000251v2_alt:3239700-3242109	0	+	3239700	3239788	789624	4	127,141,96,587,	0,971,1620,1822,
#Deleted in new
chr6_GL000251v2_alt	3240055	3242109	chr6_GL000251v2_alt:3240055-3242109	3	+	3240311	3241788	789624	4	370,141,96,414,	0,616,1265,1640,
#Deleted in new
chr6_GL000251v2_alt	3240252	3242109	chr6_GL000251v2_alt:3240252-3242109	1	+	3240311	3241788	789624	5	173,141,96,90,417,	0,419,1068,1270,1440,
#Deleted in new
chr6_GL000251v2_alt	3240252	3242103	chr6_GL000251v2_alt:3240252-3242103	1	+	3240311	3241788	789624	4	173,141,96,411,	0,419,1068,1440,
#Deleted in new
chr6_GL000251v2_alt	3240876	3241556	chr6_GL000251v2_alt:3240876-3241556	0	+	3240876	3240876	8553170	2	540,34,	0,646,
#Deleted in new
chr6_GL000251v2_alt	3241566	3242846	chr6_GL000251v2_alt:3241566-3242846	3	-	3241566	3241566	789624	2	411,50,	0,1230,
#Deleted in new
chr6_GL000251v2_alt	3242847	3254536	chr6_GL000251v2_alt:3242847-3254536	3	-	3242851	3254021	789624	17	181,175,140,302,93,153,133,186,117,113,170,196,111,97,279,249,186,	0,293,653,871,1566,1770,2030,3414,4071,4397,7349,7637,8910,9727,10358,10940,11503,
#Deleted in new
chr6_GL000251v2_alt	3243294	3244943	chr6_GL000251v2_alt:3243294-3244943	0	-	3243294	3243294	8553170	5	21,520,93,153,66,	0,206,1119,1323,1583,
#Deleted in new
chr6_GL000251v2_alt	3243544	3254514	chr6_GL000251v2_alt:3243544-3254514	0	-	3243544	3243544	8553170	15	96,302,93,153,133,186,117,113,170,80,111,97,279,249,164,	0,174,869,1073,1333,2717,3374,3700,6652,6940,8213,9030,9661,10243,10806,
#Deleted in new
chr6_GL000251v2_alt	3248513	3250250	chr6_GL000251v2_alt:3248513-3250250	0	-	3248513	3248513	8553170	2	554,54,	0,1683,
#Deleted in new
chr6_GL000251v2_alt	3253300	3254161	chr6_GL000251v2_alt:3253300-3254161	0	-	3253300	3253300	8553170	2	184,374,	0,487,
#Deleted in new
chr6_GL000251v2_alt	3254759	3273193	chr6_GL000251v2_alt:3254759-3273193	1	-	3254835	3272457	789624	30	145,326,112,207,156,128,79,69,105,126,71,106,91,159,104,125,91,95,109,120,82,165,128,101,85,125,139,135,420,408,	0,1449,1907,2090,2480,2923,3187,3352,3501,3963,4173,4329,4569,4767,5012,5203,5578,6697,6877,7078,7729,8052,14090,14351,14697,14872,15237,15466,17311,18026,
#Deleted in new
chr6_GL000251v2_alt	3254759	3255424	chr6_GL000251v2_alt:3254759-3255424	0	-	3254759	3254759	8553170	2	145,247,	0,418,
#Deleted in new
chr6_GL000251v2_alt	3256058	3256147	chr6_GL000251v2_alt:3256058-3256147	3	-	3256058	3256058	8553170	1	89,	0,
#Deleted in new
chr6_GL000251v2_alt	3256471	3257293	chr6_GL000251v2_alt:3256471-3257293	0	-	3256471	3256471	8553170	3	63,112,444,	0,195,378,
#Deleted in new
chr6_GL000251v2_alt	3257696	3259831	chr6_GL000251v2_alt:3257696-3259831	0	-	3257696	3259831	789624	10	114,79,69,105,126,71,106,91,42,60,	0,250,415,564,1026,1236,1392,1632,1947,2075,
#Deleted in new
chr6_GL000251v2_alt	3257792	3259436	chr6_GL000251v2_alt:3257792-3259436	0	-	3257792	3257792	8553170	8	18,79,69,105,126,71,106,154,	0,154,319,468,930,1140,1296,1490,
#Deleted in new
chr6_GL000251v2_alt	3258118	3259167	chr6_GL000251v2_alt:3258118-3259167	0	-	3258118	3258118	8553170	3	62,105,445,	0,142,604,
#Deleted in new
chr6_GL000251v2_alt	3258119	3258992	chr6_GL000251v2_alt:3258119-3258992	0	-	3258119	3258119	8553170	2	61,732,	0,141,
#Deleted in new
chr6_GL000251v2_alt	3258599	3259662	chr6_GL000251v2_alt:3258599-3259662	0	-	3258599	3258599	8553170	3	249,262,334,	0,333,729,
#Deleted in new
chr6_GL000251v2_alt	3258934	3260481	chr6_GL000251v2_alt:3258934-3260481	0	-	3258934	3258934	8553170	6	69,106,91,159,316,144,	0,154,394,592,837,1403,
#Deleted in new
chr6_GL000251v2_alt	3258941	3259671	chr6_GL000251v2_alt:3258941-3259671	0	-	3258941	3258941	8553170	4	62,106,137,145,	0,147,341,585,
#Deleted in new
chr6_GL000251v2_alt	3259653	3261678	chr6_GL000251v2_alt:3259653-3261678	2	-	3259653	3259653	8553170	4	434,91,95,42,	0,684,1803,1983,
#Deleted in new
chr6_GL000251v2_alt	3261840	3270200	chr6_GL000251v2_alt:3261840-3270200	0	-	3261840	3261840	8553170	8	117,82,165,128,101,85,125,204,	0,648,971,7009,7270,7616,7791,8156,
#Deleted in new
chr6_GL000251v2_alt	3262488	3269518	chr6_GL000251v2_alt:3262488-3269518	0	-	3262488	3262488	8553170	5	82,165,128,221,62,	0,323,6361,6622,6968,
#Deleted in new
chr6_GL000251v2_alt	3270225	3272739	chr6_GL000251v2_alt:3270225-3272739	0	-	3270225	3272457	789624	2	135,669,	0,1845,
#Deleted in new
chr6_GL000251v2_alt	3274634	3284226	chr6_GL000251v2_alt:3274634-3284226	3	-	3274995	3283999	0	5	487,60,31,68,230,	0,594,1081,8682,9362,
#Deleted in new
chr6_GL000251v2_alt	3274634	3283902	chr6_GL000251v2_alt:3274634-3283902	0	-	3274634	3274634	8553170	5	487,60,31,47,142,	0,594,1081,8682,9126,
#Deleted in new
chr6_GL000251v2_alt	3274634	3283901	chr6_GL000251v2_alt:3274634-3283901	0	-	3274634	3274634	8553170	5	487,60,31,68,174,	0,594,1081,8682,9093,
#Deleted in new
chr6_GL000251v2_alt	3274634	3284161	chr6_GL000251v2_alt:3274634-3284161	0	-	3274634	3274634	8553170	4	487,60,31,165,	0,594,1081,9362,
#Deleted in new
chr6_GL000251v2_alt	3274634	3284094	chr6_GL000251v2_alt:3274634-3284094	0	-	3274634	3274634	8553170	4	487,60,68,98,	0,594,8682,9362,
#Deleted in new
chr6_GL000251v2_alt	3279992	3283844	chr6_GL000251v2_alt:3279992-3283844	0	-	3279992	3279992	8553170	4	42,26,68,117,	0,128,3324,3735,
#Deleted in new
chr6_GL000251v2_alt	3286870	3292316	chr6_GL000251v2_alt:3286870-3292316	3	-	3287298	3289224	0	2	2367,177,	0,5269,
#Deleted in new
chr6_GL000251v2_alt	3292714	3295197	chr6_GL000251v2_alt:3292714-3295197	1	+	3293007	3294933	0	1	2483,	0,
#Deleted in new
chr6_GL000251v2_alt	3292793	3295197	chr6_GL000251v2_alt:3292793-3295197	3	+	3293007	3294933	789624	2	289,1620,	0,784,
#Deleted in new
chr6_GL000251v2_alt	3304987	3307511	chr6_GL000251v2_alt:3304987-3307511	3	+	3305203	3307129	0	1	2524,	0,
#Deleted in new
chr6_GL000251v2_alt	3305163	3307510	chr6_GL000251v2_alt:3305163-3307510	1	+	3305200	3307129	789624	1	2347,	0,
#Deleted in new
chr6_GL000251v2_alt	3311854	3317005	chr6_GL000251v2_alt:3311854-3317005	1	+	3314573	3316907	789624	4	593,41,200,219,	0,802,2626,4932,
#Deleted in new
chr6_GL000251v2_alt	3311873	3317005	chr6_GL000251v2_alt:3311873-3317005	1	+	3314573	3316907	789624	4	142,41,200,219,	0,783,2607,4913,
#Deleted in new
chr6_GL000251v2_alt	3312154	3317005	chr6_GL000251v2_alt:3312154-3317005	1	+	3314573	3316907	789624	3	293,200,219,	0,2326,4632,
#Deleted in new
chr6_GL000251v2_alt	3312154	3317005	chr6_GL000251v2_alt:3312154-3317005	1	+	3314573	3316907	789624	5	293,41,94,200,219,	0,502,1514,2326,4632,
#Deleted in new
chr6_GL000251v2_alt	3312154	3317005	chr6_GL000251v2_alt:3312154-3317005	3	+	3314573	3316907	789624	4	150,41,200,219,	0,502,2326,4632,
#Deleted in new
chr6_GL000251v2_alt	3312164	3317005	chr6_GL000251v2_alt:3312164-3317005	1	+	3314573	3316907	789624	5	283,41,219,200,219,	0,492,1379,2316,4622,
#Deleted in new
chr6_GL000251v2_alt	3312168	3317010	chr6_GL000251v2_alt:3312168-3317010	1	+	3314573	3316907	789624	4	279,45,200,224,	0,488,2312,4618,
#Deleted in new
chr6_GL000251v2_alt	3312178	3317005	chr6_GL000251v2_alt:3312178-3317005	1	+	3314573	3316907	789624	5	269,41,223,200,219,	0,478,1361,2302,4608,
#Deleted in new
chr6_GL000251v2_alt	3312509	3312572	chr6_GL000251v2_alt:3312509-3312572	3	+	3312509	3312509	789624	1	63,	0,
#Deleted in new
chr6_GL000251v2_alt	3312531	3317005	chr6_GL000251v2_alt:3312531-3317005	1	+	3314573	3316907	789624	3	166,200,219,	0,1949,4255,
#Deleted in new
chr6_GL000251v2_alt	3314087	3317008	chr6_GL000251v2_alt:3314087-3317008	1	+	3314573	3316907	789624	2	593,222,	0,2699,
#Deleted in new
chr6_GL000251v2_alt	3314320	3314387	chr6_GL000251v2_alt:3314320-3314387	3	+	3314320	3314320	789624	1	67,	0,
#Deleted in new
chr6_GL000251v2_alt	3335075	3340214	chr6_GL000251v2_alt:3335075-3340214	0	-	3335075	3335075	8553170	3	2288,2150,179,	0,2384,4960,
#Deleted in new
chr6_GL000251v2_alt	3336469	3340324	chr6_GL000251v2_alt:3336469-3340324	3	-	3337136	3340194	789624	6	894,223,183,263,193,289,	0,990,1387,2136,2947,3566,
#Deleted in new
chr6_GL000251v2_alt	3336469	3340240	chr6_GL000251v2_alt:3336469-3340240	0	-	3337590	3340194	789624	6	894,137,183,263,193,205,	0,990,1387,2136,2947,3566,
#Deleted in new
chr6_GL000251v2_alt	3336469	3340223	chr6_GL000251v2_alt:3336469-3340223	0	-	3336469	3336469	8553170	4	1570,263,193,188,	0,2136,2947,3566,
#Deleted in new
chr6_GL000251v2_alt	3336652	3340234	chr6_GL000251v2_alt:3336652-3340234	0	-	3338808	3340194	789624	5	711,223,183,263,199,	0,807,1204,1953,3383,
#Deleted in new
chr6_GL000251v2_alt	3340609	3356426	chr6_GL000251v2_alt:3340609-3356426	1	-	3341044	3356405	789624	21	557,85,95,71,74,104,95,254,103,93,100,236,84,88,61,126,100,79,74,49,61,	0,1460,1624,1818,2123,2306,2498,2681,5970,6360,7418,7627,8129,8289,11275,11536,11744,12667,12871,13849,15756,
#Deleted in new
chr6_GL000251v2_alt	3340612	3355096	chr6_GL000251v2_alt:3340612-3355096	1	-	3341044	3353290	789624	21	554,85,95,71,74,104,95,254,103,93,100,236,84,88,61,126,100,79,74,49,109,	0,1457,1621,1815,2120,2303,2495,2678,5967,6357,7415,7624,8126,8286,11272,11533,11741,12664,12868,13846,14375,
#Deleted in new
chr6_GL000251v2_alt	3340612	3356471	chr6_GL000251v2_alt:3340612-3356471	1	-	3341044	3356405	789624	20	554,85,95,71,74,104,95,254,103,93,100,236,84,88,61,100,79,74,49,106,	0,1457,1621,1815,2120,2303,2495,2678,5967,6357,7415,7624,8126,8286,11272,11741,12664,12868,13846,15753,
#Deleted in new
chr6_GL000251v2_alt	3340994	3342098	chr6_GL000251v2_alt:3340994-3342098	0	-	3340994	3340994	8553170	2	172,220,	0,884,
#Deleted in new
chr6_GL000251v2_alt	3343107	3356392	chr6_GL000251v2_alt:3343107-3356392	2	-	3343107	3356392	789624	13	95,254,103,93,84,88,61,126,100,79,74,49,27,	0,183,3472,3862,5631,5791,8777,9038,9246,10169,10373,11351,13258,
#Deleted in new
chr6_GL000251v2_alt	3343476	3348627	chr6_GL000251v2_alt:3343476-3348627	0	-	3343476	3343476	8553170	4	68,103,93,391,	0,3103,3493,4760,
#Deleted in new
chr6_GL000251v2_alt	3347020	3348669	chr6_GL000251v2_alt:3347020-3348669	0	-	3347020	3347020	8553170	3	42,100,433,	0,1007,1216,
#Deleted in new
chr6_GL000251v2_alt	3351949	3356422	chr6_GL000251v2_alt:3351949-3356422	0	-	3351949	3351949	8553170	6	322,100,79,74,49,57,	0,404,1327,1531,2509,4416,
#Deleted in new
chr6_GL000251v2_alt	3352246	3356422	chr6_GL000251v2_alt:3352246-3356422	0	-	3352246	3352246	8553170	6	25,100,121,74,49,57,	0,107,988,1234,2212,4119,
#Deleted in new
chr6_GL000251v2_alt	3357183	3375102	chr6_GL000251v2_alt:3357183-3375102	1	-	3357508	3375102	0	27	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,115,135,156,41,85,254,219,67,42,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9469,9709,12648,12935,13067,16504,16847,17164,17877,
#Deleted in new
chr6_GL000251v2_alt	3357183	3374627	chr6_GL000251v2_alt:3357183-3374627	1	-	3357508	3374627	789624	27	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,102,115,135,156,41,85,254,219,280,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9210,9469,9709,12648,12935,13067,16504,16847,17164,
#Deleted in new
chr6_GL000251v2_alt	3357183	3374647	chr6_GL000251v2_alt:3357183-3374647	1	-	3357508	3374627	789624	26	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,115,135,156,41,85,254,219,300,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9469,9709,12648,12935,13067,16504,16847,17164,
#Deleted in new
chr6_GL000251v2_alt	3357183	3375109	chr6_GL000251v2_alt:3357183-3375109	3	-	3357508	3375102	0	28	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,102,115,135,156,41,85,254,219,67,49,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9210,9469,9709,12648,12935,13067,16504,16847,17164,17877,
#Deleted in new
chr6_GL000251v2_alt	3357183	3363862	chr6_GL000251v2_alt:3357183-3363862	0	-	3357183	3357183	8553170	10	506,176,79,87,116,78,145,168,155,1526,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,
#Deleted in new
chr6_GL000251v2_alt	3357183	3362566	chr6_GL000251v2_alt:3357183-3362566	0	-	3357183	3357183	8553170	9	506,176,79,87,116,78,145,408,230,	0,914,1255,2940,3135,3603,4047,4633,5153,
#Deleted in new
chr6_GL000251v2_alt	3357183	3362231	chr6_GL000251v2_alt:3357183-3362231	0	-	3357183	3357183	8553170	9	506,176,79,87,116,78,145,168,162,	0,914,1255,2940,3135,3603,4047,4633,4886,
#Deleted in new
chr6_GL000251v2_alt	3357183	3373929	chr6_GL000251v2_alt:3357183-3373929	0	-	3357183	3357183	8553170	26	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,102,115,135,156,41,85,301,242,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9210,9469,9709,12648,12935,13067,13603,16504,
#Deleted in new
chr6_GL000251v2_alt	3361185	3361479	chr6_GL000251v2_alt:3361185-3361479	3	+	3361185	3361185	8553170	2	51,172,	0,122,
#Deleted in new
chr6_GL000251v2_alt	3361243	3364489	chr6_GL000251v2_alt:3361243-3364489	0	-	3361243	3364489	789624	7	132,168,155,144,102,123,70,	0,573,826,1093,2762,2956,3176,
#Deleted in new
chr6_GL000251v2_alt	3362097	3364544	chr6_GL000251v2_alt:3362097-3364544	0	-	3362097	3362097	8553170	4	127,105,102,345,	0,239,1908,2102,
#Deleted in new
chr6_GL000251v2_alt	3369842	3370611	chr6_GL000251v2_alt:3369842-3370611	0	-	3369842	3369842	8553170	3	145,41,361,	0,276,408,
#Deleted in new
chr6_GL000251v2_alt	3372825	3375112	chr6_GL000251v2_alt:3372825-3375112	0	-	3372825	3372825	8553170	4	1116,219,67,52,	0,1205,1522,2235,
#Deleted in new
chr6_GL000251v2_alt	3375209	3423101	chr6_GL000251v2_alt:3375209-3423101	1	+	3411099	3422784	789624	14	158,174,139,141,90,141,95,112,166,77,92,127,50,497,	0,35827,38140,39536,41448,45176,45442,45633,45861,46134,46352,46944,47197,47395,
#Deleted in new
chr6_GL000251v2_alt	3375211	3423099	chr6_GL000251v2_alt:3375211-3423099	0	+	3375211	3375211	8553170	15	156,174,99,139,141,90,141,95,112,166,77,92,127,54,495,	0,35825,36082,38138,39534,41446,45174,45440,45631,45859,46132,46350,46942,47191,47393,
#Deleted in new
chr6_GL000251v2_alt	3377031	3379417	chr6_GL000251v2_alt:3377031-3379417	3	-	3377350	3378730	789624	2	1719,156,	0,2230,
#Deleted in new
chr6_GL000251v2_alt	3378423	3416678	chr6_GL000251v2_alt:3378423-3416678	0	+	3378491	3416678	789624	5	141,174,99,141,21,	0,32613,32870,36322,38234,
#Deleted in new
chr6_GL000251v2_alt	3378423	3423101	chr6_GL000251v2_alt:3378423-3423101	1	+	3378491	3422784	0	14	141,174,99,141,90,141,95,112,166,77,92,127,50,497,	0,32613,32870,36322,38234,41962,42228,42419,42647,42920,43138,43730,43983,44181,
#Deleted in new
chr6_GL000251v2_alt	3378428	3411722	chr6_GL000251v2_alt:3378428-3411722	0	+	3378491	3411722	789624	4	136,174,99,130,	0,32608,32865,33164,
#Deleted in new
chr6_GL000251v2_alt	3397367	3414886	chr6_GL000251v2_alt:3397367-3414886	0	+	3397367	3397367	8553170	6	86,174,99,134,139,141,	0,13669,13926,14225,15982,17378,
#Deleted in new
chr6_GL000251v2_alt	3397410	3406321	chr6_GL000251v2_alt:3397410-3406321	0	+	3405179	3406321	789624	4	43,145,210,163,	0,7670,7971,8748,
#Deleted in new
chr6_GL000251v2_alt	3397522	3413417	chr6_GL000251v2_alt:3397522-3413417	2	+	3397522	3397522	8553170	5	67,174,99,134,68,	0,13514,13771,14070,15827,
#Deleted in new
chr6_GL000251v2_alt	3404903	3423101	chr6_GL000251v2_alt:3404903-3423101	1	+	3405450	3422784	789624	18	322,238,186,174,99,134,139,141,90,141,95,112,166,77,92,127,50,497,	0,478,1255,6133,6390,6689,8446,9842,11754,15482,15748,15939,16167,16440,16658,17250,17503,17701,
#Deleted in new
chr6_GL000251v2_alt	3404903	3423101	chr6_GL000251v2_alt:3404903-3423101	1	+	3405179	3422784	0	16	322,174,99,134,139,141,90,141,95,112,166,77,92,127,50,497,	0,6133,6390,6689,8446,9842,11754,15482,15748,15939,16167,16440,16658,17250,17503,17701,
#Deleted in new
chr6_GL000251v2_alt	3404918	3423099	chr6_GL000251v2_alt:3404918-3423099	1	+	3405179	3422784	0	18	307,210,186,174,99,134,139,141,90,141,95,112,166,77,92,127,50,495,	0,463,1240,6118,6375,6674,8431,9827,11739,15467,15733,15924,16152,16425,16643,17235,17488,17686,
#Deleted in new
chr6_GL000251v2_alt	3404951	3411157	chr6_GL000251v2_alt:3404951-3411157	0	+	3405179	3411157	789624	3	274,210,121,	0,430,6085,
#Deleted in new
chr6_GL000251v2_alt	3404957	3420746	chr6_GL000251v2_alt:3404957-3420746	0	+	3405179	3420746	789624	9	268,174,99,134,139,141,90,141,95,	0,6079,6336,6635,8392,9788,11700,15428,15694,
#Deleted in new
chr6_GL000251v2_alt	3405129	3412485	chr6_GL000251v2_alt:3405129-3412485	0	+	3405129	3405129	8553170	6	96,210,186,174,99,893,	0,252,1029,5907,6164,6463,
#Deleted in new
chr6_GL000251v2_alt	3405189	3423099	chr6_GL000251v2_alt:3405189-3423099	1	+	3405191	3422784	789624	14	36,174,99,141,90,141,95,112,166,77,92,127,50,495,	0,5847,6104,9556,11468,15196,15462,15653,15881,16154,16372,16964,17217,17415,
#Deleted in new
chr6_GL000251v2_alt	3409774	3411709	chr6_GL000251v2_alt:3409774-3411709	0	+	3409774	3409774	8553170	4	146,174,99,117,	0,1262,1519,1818,
#Deleted in new
chr6_GL000251v2_alt	3411709	3421185	chr6_GL000251v2_alt:3411709-3421185	0	+	3411709	3411709	8553170	8	17,139,141,90,185,95,112,115,	0,1640,3036,4948,8632,8942,9133,9361,
#Deleted in new
chr6_GL000251v2_alt	3411875	3419151	chr6_GL000251v2_alt:3411875-3419151	3	-	3411875	3411875	789624	3	184,63,540,	0,891,6736,
#Deleted in new
chr6_GL000251v2_alt	3413481	3423099	chr6_GL000251v2_alt:3413481-3423099	0	+	3413481	3413481	8553170	10	1405,90,141,95,112,166,77,92,127,495,	0,3176,6904,7170,7361,7589,7862,8080,8672,9123,
#Deleted in new
chr6_GL000251v2_alt	3421099	3423099	chr6_GL000251v2_alt:3421099-3423099	0	+	3421099	3421099	8553170	6	137,77,92,127,50,211,	0,244,462,1054,1307,1789,
#Deleted in new
chr6_GL000251v2_alt	3423076	3429511	chr6_GL000251v2_alt:3423076-3429511	3	+	3423648	3429457	0	19	51,166,234,186,174,102,137,139,132,102,138,98,118,154,77,101,133,50,210,	0,470,723,1357,1698,2092,2295,2724,3180,3593,3770,4400,4636,4969,5218,5494,5691,5905,6225,
#Deleted in new
chr6_GL000251v2_alt	3423420	3429511	chr6_GL000251v2_alt:3423420-3429511	1	+	3423648	3429457	0	18	292,234,186,174,102,137,139,132,102,138,98,118,154,77,101,133,50,210,	0,379,1013,1354,1748,1951,2380,2836,3249,3426,4056,4292,4625,4874,5150,5347,5561,5881,
#Deleted in new
chr6_GL000251v2_alt	3423523	3424295	chr6_GL000251v2_alt:3423523-3424295	0	+	3423523	3423523	8553170	2	189,496,	0,276,
#Deleted in new
chr6_GL000251v2_alt	3423552	3425270	chr6_GL000251v2_alt:3423552-3425270	0	+	3423552	3423552	8553170	5	160,121,186,174,102,	0,360,881,1222,1616,
#Deleted in new
chr6_GL000251v2_alt	3423648	3428072	chr6_GL000251v2_alt:3423648-3428072	0	+	3423648	3423648	8553170	12	64,234,186,174,102,137,139,132,102,138,98,360,	0,151,785,1126,1520,1723,2152,2608,3021,3198,3828,4064,
#Deleted in new
chr6_GL000251v2_alt	3424707	3426978	chr6_GL000251v2_alt:3424707-3426978	0	+	3424707	3424707	8553170	6	241,102,568,132,102,132,	0,461,664,1549,1962,2139,
#Deleted in new
chr6_GL000251v2_alt	3425223	3427025	chr6_GL000251v2_alt:3425223-3427025	0	+	3425223	3425223	8553170	6	47,137,139,132,102,179,	0,148,577,1033,1446,1623,
#Deleted in new
chr6_GL000251v2_alt	3425784	3427025	chr6_GL000251v2_alt:3425784-3427025	0	+	3425784	3425784	8553170	4	155,132,102,179,	0,472,885,1062,
#Deleted in new
chr6_GL000251v2_alt	3426424	3427025	chr6_GL000251v2_alt:3426424-3427025	0	+	3426424	3426424	8553170	2	347,179,	0,422,
#Deleted in new
chr6_GL000251v2_alt	3427157	3428671	chr6_GL000251v2_alt:3427157-3428671	0	+	3427157	3427157	8553170	4	417,487,77,101,	0,555,1137,1413,
#Deleted in new
chr6_GL000251v2_alt	3428300	3429511	chr6_GL000251v2_alt:3428300-3429511	0	+	3428300	3428300	8553170	4	371,133,50,210,	0,467,681,1001,
#Deleted in new
chr6_GL000251v2_alt	3428841	3429511	chr6_GL000251v2_alt:3428841-3429511	0	+	3428841	3428841	8553170	2	59,530,	0,140,
#Deleted in new
chr6_GL000251v2_alt	3429513	3436519	chr6_GL000251v2_alt:3429513-3436519	1	-	3429727	3435873	0	11	312,103,55,145,338,38,75,146,70,83,201,	0,1642,1993,2211,2468,2972,3132,4606,4854,6285,6805,
#Deleted in new
chr6_GL000251v2_alt	3429654	3436346	chr6_GL000251v2_alt:3429654-3436346	0	-	3429654	3429654	8553170	9	171,103,55,145,542,75,146,70,548,	0,1501,1852,2070,2327,2991,4465,4713,6144,
#Deleted in new
chr6_GL000251v2_alt	3429654	3436371	chr6_GL000251v2_alt:3429654-3436371	0	-	3429654	3429654	8553170	10	171,406,145,338,38,75,146,70,83,53,	0,1501,2070,2327,2831,2991,4465,4713,6144,6664,
#Deleted in new
chr6_GL000251v2_alt	3431184	3436384	chr6_GL000251v2_alt:3431184-3436384	2	-	3431184	3435873	789624	10	74,55,145,323,38,75,146,70,83,66,	0,322,540,797,1301,1461,2935,3183,4614,5134,
#Deleted in new
chr6_GL000251v2_alt	3431730	3435906	chr6_GL000251v2_alt:3431730-3435906	0	-	3431730	3435873	789624	7	139,338,38,75,146,70,108,	0,251,755,915,2389,2637,4068,
#Deleted in new
chr6_GL000251v2_alt	3431986	3435998	chr6_GL000251v2_alt:3431986-3435998	0	-	3431986	3435873	789624	6	318,38,75,146,70,200,	0,499,659,2133,2381,3812,
#Deleted in new
chr6_GL000251v2_alt	3432176	3436465	chr6_GL000251v2_alt:3432176-3436465	0	-	3432176	3432176	8553170	6	347,75,146,70,83,147,	0,469,1943,2191,3622,4142,
#Deleted in new
chr6_GL000251v2_alt	3432199	3436395	chr6_GL000251v2_alt:3432199-3436395	0	-	3432199	3432199	8553170	7	30,38,75,146,70,147,77,	0,286,446,1920,2168,3535,4119,
#Deleted in new
chr6_GL000251v2_alt	3432246	3436286	chr6_GL000251v2_alt:3432246-3436286	0	-	3432246	3435873	789624	7	73,38,75,146,70,83,280,	0,239,399,1873,2121,3552,3760,
#Deleted in new
chr6_GL000251v2_alt	3432491	3436392	chr6_GL000251v2_alt:3432491-3436392	0	-	3432491	3432491	8553170	5	32,75,318,83,74,	0,154,1628,3307,3827,
#Deleted in new
chr6_GL000251v2_alt	3432645	3436381	chr6_GL000251v2_alt:3432645-3436381	0	-	3432645	3432645	8553170	6	75,146,70,118,83,63,	0,1474,1722,2099,3153,3673,
#Deleted in new
chr6_GL000251v2_alt	3434826	3435873	chr6_GL000251v2_alt:3434826-3435873	1	-	3434826	3435873	789624	2	36,75,	0,972,
#Deleted in new
chr6_GL000251v2_alt	3436506	3447178	chr6_GL000251v2_alt:3436506-3447178	3	+	3436619	3447142	789624	28	135,104,110,118,115,75,54,191,129,146,147,85,107,147,97,213,111,231,138,138,105,148,127,211,111,219,141,237,	0,217,930,1140,1352,1586,1961,2116,2467,2829,3359,3634,3905,4333,4557,4833,5152,6703,7629,7924,8193,8635,8876,9248,9606,9791,10200,10435,
#Deleted in new
chr6_GL000251v2_alt	3436543	3438813	chr6_GL000251v2_alt:3436543-3438813	0	+	3436543	3436543	8553170	8	98,104,110,118,115,75,54,46,	0,180,893,1103,1315,1549,1924,2224,
#Deleted in new
chr6_GL000251v2_alt	3436565	3440010	chr6_GL000251v2_alt:3436565-3440010	0	+	3436565	3436565	8553170	5	76,46,129,146,145,	0,2202,2408,2770,3300,
#Deleted in new
chr6_GL000251v2_alt	3436574	3447178	chr6_GL000251v2_alt:3436574-3447178	0	+	3436574	3436574	8553170	23	67,104,110,118,115,75,635,146,147,378,147,97,213,111,231,138,138,105,148,127,211,467,472,	0,149,862,1072,1284,1518,1893,2761,3291,3566,4265,4489,4765,5084,6635,7561,7856,8125,8567,8808,9180,9475,10132,
#Deleted in new
chr6_GL000251v2_alt	3436617	3437385	chr6_GL000251v2_alt:3436617-3437385	0	+	3436617	3436617	8553170	2	24,662,	0,106,
#Deleted in new
chr6_GL000251v2_alt	3436619	3438652	chr6_GL000251v2_alt:3436619-3438652	1	+	3436619	3438652	789624	4	22,104,54,30,	0,104,1848,2003,
#Deleted in new
chr6_GL000251v2_alt	3438923	3440437	chr6_GL000251v2_alt:3438923-3440437	0	+	3438923	3438923	8553170	5	179,146,147,85,26,	0,412,942,1217,1488,
#Deleted in new
chr6_GL000251v2_alt	3444254	3445871	chr6_GL000251v2_alt:3444254-3445871	0	+	3444254	3444254	8553170	6	19,138,105,148,168,113,	0,176,445,887,1128,1504,
#Deleted in new
chr6_GL000251v2_alt	3444447	3445875	chr6_GL000251v2_alt:3444447-3445875	0	+	3444447	3444447	8553170	4	121,105,148,493,	0,252,694,935,
#Deleted in new
chr6_GL000251v2_alt	3444529	3446413	chr6_GL000251v2_alt:3444529-3446413	0	+	3444529	3444529	8553170	6	39,105,148,127,211,301,	0,170,612,853,1225,1583,
#Deleted in new
chr6_GL000251v2_alt	3445749	3447178	chr6_GL000251v2_alt:3445749-3447178	0	+	3445749	3445749	8553170	4	139,189,141,237,	0,578,957,1192,
#Deleted in new
chr6_GL000251v2_alt	3445880	3446835	chr6_GL000251v2_alt:3445880-3446835	0	+	3445880	3445880	8553170	3	85,111,538,	0,232,417,
#Deleted in new
chr6_GL000251v2_alt	3445901	3447178	chr6_GL000251v2_alt:3445901-3447178	0	+	3445901	3445901	8553170	4	64,111,219,472,	0,211,396,805,
#Deleted in new
chr6_GL000251v2_alt	3445906	3447178	chr6_GL000251v2_alt:3445906-3447178	0	+	3445906	3445906	8553170	4	59,174,219,472,	0,143,391,800,
#Deleted in new
chr6_GL000251v2_alt	3446112	3447178	chr6_GL000251v2_alt:3446112-3447178	0	+	3446112	3446112	8553170	4	111,219,37,237,	0,185,594,829,
#Deleted in new
chr6_GL000251v2_alt	3447236	3449563	chr6_GL000251v2_alt:3447236-3449563	1	-	3447303	3449102	789624	7	215,95,136,220,236,406,208,	0,299,533,796,1102,1510,2119,
#Deleted in new
chr6_GL000251v2_alt	3447236	3449398	chr6_GL000251v2_alt:3447236-3449398	1	-	3447303	3449102	789624	6	215,95,136,220,236,652,	0,299,533,796,1102,1510,
#Deleted in new
chr6_GL000251v2_alt	3447236	3449719	chr6_GL000251v2_alt:3447236-3449719	3	-	3447303	3449102	789624	7	215,95,136,220,236,362,364,	0,299,533,796,1102,1510,2119,
#Deleted in new
chr6_GL000251v2_alt	3447236	3449636	chr6_GL000251v2_alt:3447236-3449636	0	-	3447236	3447236	8553170	5	215,95,136,542,890,	0,299,533,796,1510,
#Deleted in new
chr6_GL000251v2_alt	3447236	3449112	chr6_GL000251v2_alt:3447236-3449112	0	-	3447236	3447236	8553170	5	215,95,483,236,366,	0,299,533,1102,1510,
#Deleted in new
chr6_GL000251v2_alt	3447236	3449679	chr6_GL000251v2_alt:3447236-3449679	0	-	3447236	3447236	8553170	4	215,95,136,1647,	0,299,533,796,
#Deleted in new
chr6_GL000251v2_alt	3447236	3449110	chr6_GL000251v2_alt:3447236-3449110	0	-	3447236	3447236	8553170	2	1338,364,	0,1510,
#Deleted in new
chr6_GL000251v2_alt	3447236	3448284	chr6_GL000251v2_alt:3447236-3448284	0	-	3447236	3447236	8553170	4	215,95,36,265,	0,299,533,783,
#Deleted in new
chr6_GL000251v2_alt	3447236	3449665	chr6_GL000251v2_alt:3447236-3449665	0	-	3447236	3447236	8553170	6	215,95,136,147,236,310,	0,299,533,796,1102,2119,
#Deleted in new
chr6_GL000251v2_alt	3447236	3449522	chr6_GL000251v2_alt:3447236-3449522	0	-	3447236	3447236	8553170	3	215,1039,776,	0,299,1510,
#Deleted in new
chr6_GL000251v2_alt	3447810	3449563	chr6_GL000251v2_alt:3447810-3449563	0	-	3447810	3447810	8553170	5	95,147,236,406,208,	0,222,528,936,1545,
#Deleted in new
chr6_GL000251v2_alt	3448037	3449525	chr6_GL000251v2_alt:3448037-3449525	0	-	3448037	3448037	8553170	4	142,228,262,170,	0,301,709,1318,
#Deleted in new
chr6_GL000251v2_alt	3448069	3449416	chr6_GL000251v2_alt:3448069-3449416	0	-	3448069	3448069	8553170	3	110,236,670,	0,269,677,
#Deleted in new
chr6_GL000251v2_alt	3448328	3449436	chr6_GL000251v2_alt:3448328-3449436	0	-	3448328	3448328	8553170	3	246,406,81,	0,418,1027,
#Deleted in new
chr6_GL000251v2_alt	3448601	3456437	chr6_GL000251v2_alt:3448601-3456437	0	+	3448601	3448601	8553170	4	100,643,137,108,	0,694,1446,7728,
#Deleted in new
chr6_GL000251v2_alt	3448601	3458872	chr6_GL000251v2_alt:3448601-3458872	3	+	3449637	3458476	789624	8	100,643,137,96,140,98,148,442,	0,694,1446,7728,8239,9276,9479,9829,
#Deleted in new
chr6_GL000251v2_alt	3449295	3458873	chr6_GL000251v2_alt:3449295-3458873	1	+	3449423	3458476	789624	8	348,210,137,96,140,98,148,443,	0,433,752,7034,7545,8582,8785,9135,
#Deleted in new
chr6_GL000251v2_alt	3449370	3458873	chr6_GL000251v2_alt:3449370-3458873	1	+	3449423	3458476	789624	8	273,210,137,108,140,98,148,443,	0,358,677,6959,7470,8507,8710,9060,
#Deleted in new
chr6_GL000251v2_alt	3449766	3458873	chr6_GL000251v2_alt:3449766-3458873	0	+	3449766	3449766	8553170	6	172,137,96,1135,148,443,	0,281,6563,7074,8314,8664,
#Deleted in new
chr6_GL000251v2_alt	3449779	3458873	chr6_GL000251v2_alt:3449779-3458873	0	+	3449779	3449779	8553170	3	159,80,443,	0,8369,8651,
#Deleted in new
chr6_GL000251v2_alt	3449814	3458873	chr6_GL000251v2_alt:3449814-3458873	0	+	3449814	3449814	8553170	6	124,96,140,98,148,443,	0,6515,7026,8063,8266,8616,
#Deleted in new
chr6_GL000251v2_alt	3449817	3450845	chr6_GL000251v2_alt:3449817-3450845	0	+	3449817	3449817	8553170	2	121,798,	0,230,
#Deleted in new
chr6_GL000251v2_alt	3449981	3458873	chr6_GL000251v2_alt:3449981-3458873	0	+	3449981	3449981	8553170	6	203,96,140,98,148,443,	0,6348,6859,7896,8099,8449,
#Deleted in new
chr6_GL000251v2_alt	3450004	3457289	chr6_GL000251v2_alt:3450004-3457289	0	+	3450004	3450004	8553170	3	180,96,449,	0,6325,6836,
#Deleted in new
chr6_GL000251v2_alt	3450008	3458228	chr6_GL000251v2_alt:3450008-3458228	0	+	3450008	3450008	8553170	5	338,96,140,98,148,	0,6321,6832,7869,8072,
#Deleted in new
chr6_GL000251v2_alt	3457817	3458873	chr6_GL000251v2_alt:3457817-3458873	0	+	3457817	3457817	8553170	2	411,443,	0,613,
#Deleted in new
chr6_GL000251v2_alt	3459450	3473740	chr6_GL000251v2_alt:3459450-3473740	3	+	3459534	3473599	0	41	149,199,202,71,89,83,97,106,133,116,180,183,186,159,127,75,198,112,71,140,210,52,90,210,76,157,117,172,233,168,60,94,187,91,75,103,90,99,84,133,283,	0,281,694,1105,1254,1561,1814,2049,2252,2801,3016,3341,3656,3995,4405,4699,5034,5323,5525,5854,6107,6561,6714,6939,7328,7564,7816,8038,8437,8752,9313,10422,10613,10914,11095,12661,12929,13104,13385,13731,14007,
#Deleted in new
chr6_GL000251v2_alt	3459483	3473739	chr6_GL000251v2_alt:3459483-3473739	1	+	3459534	3473599	789624	40	116,199,202,71,89,83,97,106,133,116,180,183,186,159,127,75,198,112,71,140,210,52,90,210,76,157,117,172,233,168,60,94,140,75,103,90,99,84,133,282,	0,248,661,1072,1221,1528,1781,2016,2219,2768,2983,3308,3623,3962,4372,4666,5001,5290,5492,5821,6074,6528,6681,6906,7295,7531,7783,8005,8404,8719,9280,10389,10580,11062,12628,12896,13071,13352,13698,13974,
#Deleted in new
chr6_GL000251v2_alt	3460269	3460986	chr6_GL000251v2_alt:3460269-3460986	0	+	3460269	3460269	8553170	2	77,431,	0,286,
#Deleted in new
chr6_GL000251v2_alt	3460307	3461825	chr6_GL000251v2_alt:3460307-3461825	0	+	3460307	3460307	8553170	5	39,71,89,83,123,	0,248,397,704,1395,
#Deleted in new
chr6_GL000251v2_alt	3463236	3465036	chr6_GL000251v2_alt:3463236-3465036	0	+	3463236	3463236	8553170	6	56,159,127,75,198,263,	0,209,619,913,1248,1537,
#Deleted in new
chr6_GL000251v2_alt	3466168	3466680	chr6_GL000251v2_alt:3466168-3466680	0	+	3466168	3466168	8553170	2	86,291,	0,221,
#Deleted in new
chr6_GL000251v2_alt	3467014	3469895	chr6_GL000251v2_alt:3467014-3469895	0	+	3467014	3467014	8553170	7	157,117,172,173,168,60,23,	0,252,474,933,1188,1749,2858,
#Deleted in new
chr6_GL000251v2_alt	3468800	3470778	chr6_GL000251v2_alt:3468800-3470778	0	+	3468800	3468800	8553170	5	23,94,187,91,233,	0,1072,1263,1564,1745,
#Deleted in new
chr6_GL000251v2_alt	3469909	3470589	chr6_GL000251v2_alt:3469909-3470589	0	+	3469909	3469909	8553170	2	57,526,	0,154,
#Deleted in new
chr6_GL000251v2_alt	3470213	3473740	chr6_GL000251v2_alt:3470213-3473740	0	+	3470213	3470213	8553170	8	37,91,75,103,90,99,479,283,	0,151,332,1898,2166,2341,2622,3244,
#Deleted in new
chr6_GL000251v2_alt	3470258	3473740	chr6_GL000251v2_alt:3470258-3473740	0	+	3470258	3470258	8553170	8	197,75,103,90,99,84,133,283,	0,287,1853,2121,2296,2577,2923,3199,
#Deleted in new
chr6_GL000251v2_alt	3471050	3474580	chr6_GL000251v2_alt:3471050-3474580	3	-	3471050	3471050	8553170	2	1577,502,	0,3028,
#Deleted in new
chr6_GL000251v2_alt	3472056	3473740	chr6_GL000251v2_alt:3472056-3473740	0	+	3472056	3472056	8553170	6	158,90,99,84,133,283,	0,323,498,779,1125,1401,
#Deleted in new
chr6_GL000251v2_alt	3472185	3473324	chr6_GL000251v2_alt:3472185-3473324	0	+	3472185	3472185	8553170	2	29,945,	0,194,
#Deleted in new
chr6_GL000251v2_alt	3472318	3472927	chr6_GL000251v2_alt:3472318-3472927	0	+	3472318	3472318	8553170	2	151,373,	0,236,
#Deleted in new
chr6_GL000251v2_alt	3476619	3479964	chr6_GL000251v2_alt:3476619-3479964	3	+	3476744	3479456	789624	10	327,90,155,102,102,87,201,179,104,774,	0,424,796,1058,1248,1451,1707,2108,2370,2571,
#Deleted in new
chr6_GL000251v2_alt	3476637	3477769	chr6_GL000251v2_alt:3476637-3477769	0	+	3476637	3476637	8553170	4	309,44,147,92,	0,406,786,1040,
#Deleted in new
chr6_GL000251v2_alt	3476686	3479964	chr6_GL000251v2_alt:3476686-3479964	0	+	3476686	3476686	8553170	9	447,155,102,62,87,201,179,104,774,	0,729,991,1221,1384,1640,2041,2303,2504,
#Deleted in new
chr6_GL000251v2_alt	3476686	3479964	chr6_GL000251v2_alt:3476686-3479964	0	+	3476686	3476686	8553170	9	260,90,155,102,102,87,201,366,774,	0,357,729,991,1181,1384,1640,2041,2504,
#Deleted in new
chr6_GL000251v2_alt	3476686	3479964	chr6_GL000251v2_alt:3476686-3479964	0	+	3476686	3476686	8553170	8	447,155,102,102,87,179,104,774,	0,729,991,1181,1384,2041,2303,2504,
#Deleted in new
chr6_GL000251v2_alt	3476691	3479964	chr6_GL000251v2_alt:3476691-3479964	0	+	3476691	3476691	8553170	9	442,174,102,102,87,201,179,104,774,	0,705,986,1176,1379,1635,2036,2298,2499,
#Deleted in new
chr6_GL000251v2_alt	3476736	3479992	chr6_GL000251v2_alt:3476736-3479992	1	+	3476744	3479456	0	9	210,155,102,102,87,201,179,104,802,	0,679,941,1131,1334,1590,1991,2253,2454,
#Deleted in new
chr6_GL000251v2_alt	3476736	3477873	chr6_GL000251v2_alt:3476736-3477873	0	+	3476736	3476736	8553170	5	210,90,174,102,6,	0,307,660,941,1131,
#Deleted in new
chr6_GL000251v2_alt	3476736	3477437	chr6_GL000251v2_alt:3476736-3477437	0	+	3476736	3476736	8553170	2	210,394,	0,307,
#Deleted in new
chr6_GL000251v2_alt	3476736	3477805	chr6_GL000251v2_alt:3476736-3477805	0	+	3476736	3476736	8553170	4	210,90,155,128,	0,307,679,941,
#Deleted in new
chr6_GL000251v2_alt	3479476	3547707	chr6_GL000251v2_alt:3479476-3547707	1	-	3479670	3536531	789624	44	296,164,162,97,152,133,131,144,120,144,123,336,321,282,279,288,318,291,324,291,324,318,333,324,327,297,324,318,315,309,288,309,306,333,306,291,297,369,264,157,116,1839,411,194,	0,616,857,1111,1300,1544,1796,2020,2282,2594,2852,3226,3851,5020,6579,7208,8115,8843,11515,12233,14696,15431,16903,20242,21002,23666,26523,27252,27684,28415,28989,30852,32509,37894,40228,40896,43273,44610,47642,48080,53932,54467,56652,68037,
#Deleted in new
chr6_GL000251v2_alt	3479476	3484450	chr6_GL000251v2_alt:3479476-3484450	0	-	3479476	3479476	8553170	13	296,164,162,97,152,133,131,144,120,144,123,336,1123,	0,616,857,1111,1300,1544,1796,2020,2282,2594,2852,3226,3851,
#Deleted in new
chr6_GL000251v2_alt	3479476	3484929	chr6_GL000251v2_alt:3479476-3484929	0	-	3479476	3479476	8553170	14	296,164,162,97,152,133,131,144,120,144,123,336,321,433,	0,616,857,1111,1300,1544,1796,2020,2282,2594,2852,3226,3851,5020,
#Deleted in new
chr6_GL000251v2_alt	3479476	3547707	chr6_GL000251v2_alt:3479476-3547707	3	-	3479670	3536531	789624	44	296,164,162,97,152,133,131,144,120,144,123,336,321,282,279,288,318,324,324,318,324,318,333,324,327,297,324,318,315,309,288,309,306,333,306,291,297,369,264,157,116,1839,411,194,	0,616,857,1111,1300,1544,1796,2020,2282,2594,2852,3226,3851,5020,6579,7208,8115,8843,11515,12233,14696,15431,16903,20242,21002,23666,26523,27252,27684,28415,28989,30852,32509,37894,40228,40896,43273,44610,47642,48080,53932,54467,56652,68037,
#Deleted in new
chr6_GL000251v2_alt	3480587	3481774	chr6_GL000251v2_alt:3480587-3481774	0	-	3480587	3480587	8553170	5	97,152,383,144,16,	0,189,433,909,1171,
#Deleted in new
chr6_GL000251v2_alt	3516845	3516966	chr6_GL000251v2_alt:3516845-3516966	3	-	3516845	3516845	8553170	1	121,	0,
#Deleted in new
chr6_GL000251v2_alt	3533911	3547554	chr6_GL000251v2_alt:3533911-3547554	0	-	3533911	3533911	8553170	2	2628,41,	0,13602,
#Deleted in new
chr6_GL000251v2_alt	3536508	3555943	chr6_GL000251v2_alt:3536508-3555943	0	-	3536508	3536531	789624	5	31,112,71,82,24,	0,18528,18861,19147,19411,
#Deleted in new
chr6_GL000251v2_alt	3536508	3553667	chr6_GL000251v2_alt:3536508-3553667	0	-	3536508	3536531	789624	2	31,341,	0,16818,
#Deleted in new
chr6_GL000251v2_alt	3553596	3566571	chr6_GL000251v2_alt:3553596-3566571	1	-	3554071	3566538	789624	18	705,85,112,71,82,108,180,92,186,134,132,136,86,136,92,79,80,124,	0,1216,1440,1773,2059,2323,2595,3511,3692,4560,5507,5725,5999,10851,11837,12176,12405,12851,
#Deleted in new
chr6_GL000251v2_alt	3553596	3566584	chr6_GL000251v2_alt:3553596-3566584	1	-	3554071	3566538	789624	18	705,85,112,71,82,108,180,92,186,134,132,136,86,136,92,79,80,128,	0,1216,1440,1773,2059,2323,2595,3511,3692,4560,5507,5725,5999,10851,11837,12176,12405,12860,
#Deleted in new
chr6_GL000251v2_alt	3555040	3556224	chr6_GL000251v2_alt:3555040-3556224	0	-	3555040	3556224	789624	5	108,94,82,108,33,	0,329,615,879,1151,
#Deleted in new
chr6_GL000251v2_alt	3557109	3558352	chr6_GL000251v2_alt:3557109-3558352	0	-	3557109	3557109	8553170	2	365,196,	0,1047,
#Deleted in new
chr6_GL000251v2_alt	3557163	3558753	chr6_GL000251v2_alt:3557163-3558753	0	-	3557163	3557163	8553170	3	36,186,597,	0,125,993,
#Deleted in new
chr6_GL000251v2_alt	3558774	3566553	chr6_GL000251v2_alt:3558774-3566553	0	-	3558774	3558774	8553170	8	461,136,86,136,92,79,80,106,	0,547,821,5673,6659,6998,7227,7673,
#Deleted in new
chr6_GL000251v2_alt	3558841	3566098	chr6_GL000251v2_alt:3558841-3566098	2	-	3558841	3558841	8553170	7	394,136,86,136,92,79,97,	0,480,754,5606,6592,6931,7160,
#Deleted in new
chr6_GL000251v2_alt	3564372	3566549	chr6_GL000251v2_alt:3564372-3566549	0	-	3564372	3564372	8553170	5	211,92,79,80,102,	0,1061,1400,1629,2075,
#Deleted in new
chr6_GL000251v2_alt	3567037	3568622	chr6_GL000251v2_alt:3567037-3568622	3	-	3567061	3568111	789624	2	1148,197,	0,1388,
#Deleted in new
chr6_GL000251v2_alt	3586695	3590289	chr6_GL000251v2_alt:3586695-3590289	1	-	3587558	3590164	789624	4	1040,186,539,144,	0,1178,2009,3450,
#Deleted in new
chr6_GL000251v2_alt	3586695	3591422	chr6_GL000251v2_alt:3586695-3591422	1	-	3587558	3590440	789624	6	1040,186,216,91,81,112,	0,1178,2009,3450,3737,4615,
#Deleted in new
chr6_GL000251v2_alt	3586695	3590260	chr6_GL000251v2_alt:3586695-3590260	0	-	3586695	3586695	8553170	3	1040,186,1556,	0,1178,2009,
#Deleted in new
chr6_GL000251v2_alt	3586695	3588194	chr6_GL000251v2_alt:3586695-3588194	0	-	3586695	3586695	8553170	2	1040,321,	0,1178,
#Deleted in new
chr6_GL000251v2_alt	3586695	3590274	chr6_GL000251v2_alt:3586695-3590274	0	-	3586695	3586695	8553170	3	1040,186,129,	0,1178,3450,
#Deleted in new
chr6_GL000251v2_alt	3588831	3592712	chr6_GL000251v2_alt:3588831-3592712	2	-	3588831	3590440	789624	5	89,91,81,100,136,	0,1314,1601,3244,3745,
#Deleted in new
chr6_GL000251v2_alt	3590318	3592299	chr6_GL000251v2_alt:3590318-3592299	0	-	3590318	3590318	8553170	3	195,201,224,	0,992,1757,
#Deleted in new
chr6_GL000251v2_alt	3591139	3592247	chr6_GL000251v2_alt:3591139-3592247	0	-	3591139	3591139	8553170	2	372,172,	0,936,
#Deleted in new
chr6_GL000251v2_alt	3591139	3592704	chr6_GL000251v2_alt:3591139-3592704	0	-	3591139	3591139	789624	3	372,100,77,	0,936,1488,
#Deleted in new
chr6_GL000251v2_alt	3591139	3592672	chr6_GL000251v2_alt:3591139-3592672	0	-	3591139	3591139	789624	3	372,100,96,	0,936,1437,
#Deleted in new
chr6_GL000251v2_alt	3591678	3592678	chr6_GL000251v2_alt:3591678-3592678	0	-	3591678	3591678	789624	3	320,71,102,	0,426,898,
#Deleted in new
chr6_GL000251v2_alt	3591723	3592665	chr6_GL000251v2_alt:3591723-3592665	0	-	3591723	3591723	789624	3	275,71,158,	0,381,784,
#Deleted in new
chr6_GL000251v2_alt	3591779	3594321	chr6_GL000251v2_alt:3591779-3594321	0	+	3592933	3594321	789624	6	196,209,191,154,96,108,	0,755,1146,1589,2251,2434,
#Deleted in new
chr6_GL000251v2_alt	3591861	3602030	chr6_GL000251v2_alt:3591861-3602030	1	+	3591965	3601302	789624	9	114,191,154,96,108,84,85,55,872,	0,1064,1507,2169,2352,4118,4321,9058,9297,
#Deleted in new
chr6_GL000251v2_alt	3591880	3596192	chr6_GL000251v2_alt:3591880-3596192	0	+	3591880	3591880	8553170	6	95,191,96,108,84,10,	0,1045,2150,2333,4099,4302,
#Deleted in new
chr6_GL000251v2_alt	3591915	3602030	chr6_GL000251v2_alt:3591915-3602030	3	+	3592933	3601302	789624	10	60,406,191,154,96,108,84,85,55,872,	0,422,1010,1453,2115,2298,4064,4267,9004,9243,
#Deleted in new
chr6_GL000251v2_alt	3592183	3606633	chr6_GL000251v2_alt:3592183-3606633	0	+	3592933	3604551	789624	16	560,191,154,96,108,84,85,55,79,483,110,96,171,80,154,372,	0,742,1185,1847,2030,3796,3999,8736,10747,12306,12869,13078,13255,13518,13671,14078,
#Deleted in new
chr6_GL000251v2_alt	3592337	3602032	chr6_GL000251v2_alt:3592337-3602032	1	+	3592933	3601302	789624	9	406,191,154,96,108,84,85,55,874,	0,588,1031,1693,1876,3642,3845,8582,8821,
#Deleted in new
chr6_GL000251v2_alt	3592433	3602030	chr6_GL000251v2_alt:3592433-3602030	1	+	3592933	3601302	789624	9	300,191,154,96,108,84,85,55,872,	0,492,935,1597,1780,3546,3749,8486,8725,
#Deleted in new
chr6_GL000251v2_alt	3592476	3602030	chr6_GL000251v2_alt:3592476-3602030	1	+	3592933	3601302	789624	9	109,191,154,96,108,84,85,55,872,	0,449,892,1554,1737,3503,3706,8443,8682,
#Deleted in new
chr6_GL000251v2_alt	3592505	3596267	chr6_GL000251v2_alt:3592505-3596267	0	+	3592933	3596267	789624	6	238,191,16,108,84,85,	0,420,1605,1708,3474,3677,
#Deleted in new
chr6_GL000251v2_alt	3592535	3600948	chr6_GL000251v2_alt:3592535-3600948	0	+	3592535	3592535	8553170	7	208,191,154,16,108,84,29,	0,390,833,1575,1678,3444,8384,
#Deleted in new
chr6_GL000251v2_alt	3592560	3610330	chr6_GL000251v2_alt:3592560-3610330	3	+	3592933	3604551	789624	21	183,191,154,96,108,84,85,55,79,95,123,110,96,155,80,154,627,209,98,1143,256,	0,365,808,1470,1653,3419,3622,8359,10370,11929,12289,12492,12701,12894,13141,13294,13701,15084,15699,16206,17514,
#Deleted in new
chr6_GL000251v2_alt	3592804	3596039	chr6_GL000251v2_alt:3592804-3596039	0	+	3592933	3596039	0	5	312,154,96,108,60,	0,564,1226,1409,3175,
#Deleted in new
chr6_GL000251v2_alt	3592816	3594126	chr6_GL000251v2_alt:3592816-3594126	0	+	3592933	3594126	789624	2	300,96,	0,1214,
#Deleted in new
chr6_GL000251v2_alt	3593356	3594102	chr6_GL000251v2_alt:3593356-3594102	0	+	3593356	3593356	8553170	2	166,72,	0,674,
#Deleted in new
chr6_GL000251v2_alt	3595453	3603007	chr6_GL000251v2_alt:3595453-3603007	0	+	3595453	3595453	8553170	4	610,85,55,77,	0,729,5466,7477,
#Deleted in new
chr6_GL000251v2_alt	3595832	3596665	chr6_GL000251v2_alt:3595832-3596665	0	+	3595832	3595832	8553170	2	231,483,	0,350,
#Deleted in new
chr6_GL000251v2_alt	3595985	3605357	chr6_GL000251v2_alt:3595985-3605357	0	+	3595985	3604551	789624	7	78,85,55,103,483,110,96,	0,197,4934,6945,8504,9067,9276,
#Deleted in new
chr6_GL000251v2_alt	3602934	3606633	chr6_GL000251v2_alt:3602934-3606633	3	+	3604517	3606308	789624	9	75,129,123,110,96,171,80,154,372,	0,1555,1915,2118,2327,2504,2767,2920,3327,
#Deleted in new
chr6_GL000251v2_alt	3602956	3606633	chr6_GL000251v2_alt:3602956-3606633	1	+	3604517	3606308	789624	9	77,129,123,110,96,171,80,154,372,	0,1533,1893,2096,2305,2482,2745,2898,3305,
#Deleted in new
chr6_GL000251v2_alt	3603011	3606008	chr6_GL000251v2_alt:3603011-3606008	0	+	3604517	3606008	789624	8	22,129,123,110,96,111,80,154,	0,1478,1838,2041,2250,2487,2690,2843,
#Deleted in new
chr6_GL000251v2_alt	3603587	3606633	chr6_GL000251v2_alt:3603587-3606633	0	+	3603587	3603587	8553170	6	1385,110,96,171,307,372,	0,1465,1674,1851,2114,2674,
#Deleted in new
chr6_GL000251v2_alt	3604544	3605521	chr6_GL000251v2_alt:3604544-3605521	0	+	3604544	3604544	8553170	4	40,123,110,260,	0,305,508,717,
#Deleted in new
chr6_GL000251v2_alt	3605894	3606633	chr6_GL000251v2_alt:3605894-3606633	0	+	3605894	3605894	8553170	2	83,372,	0,367,
#Deleted in new
chr6_GL000251v2_alt	3606563	3616448	chr6_GL000251v2_alt:3606563-3616448	3	-	3607627	3609848	789624	7	1237,73,96,176,134,209,96,	0,1754,1953,2213,2725,3085,9789,
#Deleted in new
chr6_GL000251v2_alt	3606563	3615677	chr6_GL000251v2_alt:3606563-3615677	1	-	3607627	3609848	789624	7	1237,73,96,176,134,209,92,	0,1754,1953,2213,2725,3085,9022,
#Deleted in new
chr6_GL000251v2_alt	3606563	3616138	chr6_GL000251v2_alt:3606563-3616138	1	-	3607627	3609848	789624	7	1237,73,96,176,134,209,243,	0,1754,1953,2213,2725,3085,9332,
#Deleted in new
chr6_GL000251v2_alt	3606563	3614474	chr6_GL000251v2_alt:3606563-3614474	1	-	3607627	3609848	789624	7	1237,73,96,176,134,209,309,	0,1754,1953,2213,2725,3085,7602,
#Deleted in new
chr6_GL000251v2_alt	3606563	3615432	chr6_GL000251v2_alt:3606563-3615432	1	-	3607627	3609848	789624	7	1237,73,96,176,134,209,571,	0,1754,1953,2213,2725,3085,8298,
#Deleted in new
chr6_GL000251v2_alt	3606563	3611467	chr6_GL000251v2_alt:3606563-3611467	1	-	3607627	3609848	789624	7	1237,73,96,176,134,209,178,	0,1754,1953,2213,2725,3085,4726,
#Deleted in new
chr6_GL000251v2_alt	3606563	3615694	chr6_GL000251v2_alt:3606563-3615694	0	-	3606563	3606563	8553170	5	1237,73,96,209,833,	0,1754,1953,3085,8298,
#Deleted in new
chr6_GL000251v2_alt	3608516	3614249	chr6_GL000251v2_alt:3608516-3614249	0	-	3608516	3608516	8553170	5	96,176,134,256,84,	0,260,772,1085,5649,
#Deleted in new
chr6_GL000251v2_alt	3616711	3619145	chr6_GL000251v2_alt:3616711-3619145	3	+	3616863	3618678	789624	6	292,19,113,55,118,565,	0,1181,1291,1517,1649,1869,
#Deleted in new
chr6_GL000251v2_alt	3616788	3618125	chr6_GL000251v2_alt:3616788-3618125	0	+	3616788	3616788	8553170	3	215,19,123,	0,1104,1214,
#Deleted in new
chr6_GL000251v2_alt	3619319	3622676	chr6_GL000251v2_alt:3619319-3622676	3	-	3619494	3622574	0	11	272,127,27,142,131,183,88,65,196,107,154,	0,383,638,1279,1600,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000251v2_alt	3619319	3622589	chr6_GL000251v2_alt:3619319-3622589	1	-	3619525	3622574	0	10	272,127,27,160,183,88,65,154,107,67,	0,383,638,1571,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000251v2_alt	3619319	3622598	chr6_GL000251v2_alt:3619319-3622598	1	-	3619904	3622574	0	10	272,109,142,131,183,88,65,196,107,76,	0,556,1279,1600,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000251v2_alt	3619319	3621283	chr6_GL000251v2_alt:3619319-3621283	0	-	3619319	3619319	8553170	4	272,109,142,364,	0,556,1279,1600,
#Deleted in new
chr6_GL000251v2_alt	3619319	3621283	chr6_GL000251v2_alt:3619319-3621283	0	-	3619319	3619319	8553170	5	272,127,27,142,364,	0,383,638,1279,1600,
#Deleted in new
chr6_GL000251v2_alt	3619319	3619987	chr6_GL000251v2_alt:3619319-3619987	0	-	3619319	3619319	8553170	2	272,285,	0,383,
#Deleted in new
chr6_GL000251v2_alt	3619319	3622598	chr6_GL000251v2_alt:3619319-3622598	0	-	3619319	3619319	789624	10	272,127,27,142,131,183,88,65,196,366,	0,383,638,1279,1600,1873,2146,2356,2587,2913,
#Deleted in new
chr6_GL000251v2_alt	3619319	3622674	chr6_GL000251v2_alt:3619319-3622674	1	-	3619494	3622574	0	11	272,127,27,142,131,183,88,113,196,107,152,	0,383,638,1279,1600,1873,2146,2308,2587,2913,3203,
#Deleted in new
chr6_GL000251v2_alt	3619319	3622674	chr6_GL000251v2_alt:3619319-3622674	1	-	3619904	3622574	0	10	272,109,142,131,183,88,113,196,107,152,	0,556,1279,1600,1873,2146,2308,2587,2913,3203,
#Deleted in new
chr6_GL000251v2_alt	3619319	3622674	chr6_GL000251v2_alt:3619319-3622674	1	-	3619494	3621958	789624	10	272,127,142,131,183,88,65,196,107,152,	0,383,1279,1600,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000251v2_alt	3619319	3622674	chr6_GL000251v2_alt:3619319-3622674	1	-	3619494	3622574	789624	5	272,83,123,107,152,	0,383,2660,2913,3203,
#Deleted in new
chr6_GL000251v2_alt	3619494	3622574	chr6_GL000251v2_alt:3619494-3622574	1	-	3619494	3620928	789624	8	97,127,27,142,131,59,30,52,	0,208,463,1104,1425,1698,2815,3028,
#Deleted in new
chr6_GL000251v2_alt	3621219	3622587	chr6_GL000251v2_alt:3621219-3622587	0	-	3621219	3622574	789624	6	156,88,117,183,107,65,	0,246,456,700,1013,1303,
#Deleted in new
chr6_GL000251v2_alt	3621231	3622589	chr6_GL000251v2_alt:3621231-3622589	0	-	3621231	3622574	789624	6	144,88,113,196,107,67,	0,234,396,675,1001,1291,
#Deleted in new
chr6_GL000251v2_alt	3621760	3622674	chr6_GL000251v2_alt:3621760-3622674	1	-	3621760	3622574	789624	4	32,196,107,152,	0,146,472,762,
#Deleted in new
chr6_GL000251v2_alt	3623084	3628535	chr6_GL000251v2_alt:3623084-3628535	3	-	3624730	3628264	789624	9	1739,87,89,154,136,191,248,74,492,	0,1868,2077,2506,2911,3230,3521,3987,4959,
#Deleted in new
chr6_GL000251v2_alt	3624604	3625864	chr6_GL000251v2_alt:3624604-3625864	0	-	3624604	3624604	8553170	2	646,274,	0,986,
#Deleted in new
chr6_GL000251v2_alt	3625321	3628291	chr6_GL000251v2_alt:3625321-3628291	0	-	3625321	3625321	8553170	6	423,136,191,248,74,248,	0,674,993,1284,1750,2722,
#Deleted in new
chr6_GL000251v2_alt	3625581	3627165	chr6_GL000251v2_alt:3625581-3627165	0	-	3625581	3625581	8553170	4	163,136,191,560,	0,414,733,1024,
#Deleted in new
chr6_GL000251v2_alt	3626628	3627426	chr6_GL000251v2_alt:3626628-3627426	0	-	3626628	3626628	8553170	2	225,355,	0,443,
#Deleted in new
chr6_GL000251v2_alt	3629114	3633872	chr6_GL000251v2_alt:3629114-3633872	3	-	3629714	3630862	789624	8	738,200,103,59,84,81,93,98,	0,943,1382,1706,2275,3544,3971,4660,
#Deleted in new
chr6_GL000251v2_alt	3629114	3631255	chr6_GL000251v2_alt:3629114-3631255	1	-	3629714	3630862	789624	4	738,200,103,435,	0,943,1382,1706,
#Deleted in new
chr6_GL000251v2_alt	3629114	3631217	chr6_GL000251v2_alt:3629114-3631217	1	-	3629714	3630831	789624	4	738,200,125,397,	0,943,1382,1706,
#Deleted in new
chr6_GL000251v2_alt	3629114	3631234	chr6_GL000251v2_alt:3629114-3631234	0	-	3630214	3630862	789624	4	738,162,103,414,	0,943,1382,1706,
#Deleted in new
chr6_GL000251v2_alt	3633191	3662414	chr6_GL000251v2_alt:3633191-3662414	3	-	3633785	3662275	789624	30	1308,98,148,296,139,82,220,176,384,524,113,253,185,154,88,118,153,146,160,123,114,114,195,156,237,123,348,296,82,218,	0,1481,2082,2456,3579,3807,4084,5999,6285,7244,8938,9305,15913,17627,17977,18288,18841,19263,20380,22099,22307,23149,24744,25281,25557,25908,26130,27660,28154,29005,
#Deleted in new
chr6_GL000251v2_alt	3633191	3635326	chr6_GL000251v2_alt:3633191-3635326	0	-	3633191	3633191	8553170	2	1579,53,	0,2082,
#Deleted in new
chr6_GL000251v2_alt	3633191	3642530	chr6_GL000251v2_alt:3633191-3642530	0	-	3633191	3633191	8553170	10	1308,98,148,296,139,82,220,176,2766,34,	0,1481,2082,2456,3579,3807,4084,5999,6285,9305,
#Deleted in new
chr6_GL000251v2_alt	3649278	3652582	chr6_GL000251v2_alt:3649278-3652582	0	-	3649278	3649278	8553170	5	11,154,118,153,128,	0,1540,2201,2754,3176,
#Deleted in new
chr6_GL000251v2_alt	3654205	3662404	chr6_GL000251v2_alt:3654205-3662404	0	-	3654205	3654205	8553170	11	1208,114,114,195,156,237,123,348,296,82,208,	0,1293,2135,3730,4267,4543,4894,5116,6646,7140,7991,
#Deleted in new
chr6_GL000251v2_alt	3731146	3810038	chr6_GL000251v2_alt:3731146-3810038	3	-	3731429	3809837	789624	26	1338,15,21,21,21,21,21,24,24,21,21,21,21,21,21,39,21,21,21,21,21,30,33,33,87,214,	0,7225,7983,9927,23720,29811,30442,30916,31985,37919,39361,42762,43237,43940,46304,46926,50564,56715,62095,62620,73149,73255,74930,75786,76902,78678,
#Deleted in new
chr6_GL000251v2_alt	3731146	3810010	chr6_GL000251v2_alt:3731146-3810010	1	-	3731429	3809837	789624	23	1338,15,21,21,21,21,24,21,21,21,21,21,21,39,90,21,21,21,30,33,33,87,186,	0,7225,7983,9927,29811,30442,30916,37919,39361,42762,43237,43940,46304,46926,56715,62095,62620,73149,73255,74930,75786,76902,78678,
#Deleted in new
chr6_GL000251v2_alt	3763694	3764654	chr6_GL000251v2_alt:3763694-3764654	7	+	3763694	3763694	16724991	1	960,	0,
#Deleted in new
chr6_GL000251v2_alt	3790998	3791105	chr6_GL000251v2_alt:3790998-3791105	3	+	3790998	3790998	8553170	1	107,	0,
#Deleted in new
chr6_GL000251v2_alt	3828609	3831778	chr6_GL000251v2_alt:3828609-3831778	3	+	3828609	3828609	789624	3	244,128,238,	0,1103,2931,
#Deleted in new
chr6_GL000251v2_alt	3832054	3845208	chr6_GL000251v2_alt:3832054-3845208	3	-	3832060	3845201	789624	7	95,282,348,21,282,348,86,	0,781,2076,7807,8957,10961,13068,
#Deleted in new
chr6_GL000251v2_alt	3832827	3845201	chr6_GL000251v2_alt:3832827-3845201	0	-	3839866	3845201	789624	5	290,344,21,112,79,	0,1307,7034,10424,12295,
#Deleted in new
chr6_GL000251v2_alt	3832827	3845201	chr6_GL000251v2_alt:3832827-3845201	1	-	3832827	3834377	789624	5	290,348,21,107,79,	0,1303,7034,10429,12295,
#Deleted in new
chr6_GL000251v2_alt	3832827	3845201	chr6_GL000251v2_alt:3832827-3845201	1	-	3832827	3845201	789624	6	290,348,21,282,348,79,	0,1303,7034,8184,10188,12295,
#Deleted in new
chr6_GL000251v2_alt	3843113	3845208	chr6_GL000251v2_alt:3843113-3845208	0	-	3843113	3845201	789624	2	247,86,	0,2009,
#Deleted in new
chr6_GL000251v2_alt	3877967	3883135	chr6_GL000251v2_alt:3877967-3883135	3	+	3878076	3882033	0	5	191,246,282,166,395,	0,2603,3340,3911,4773,
#Deleted in new
chr6_GL000251v2_alt	3877997	3881320	chr6_GL000251v2_alt:3877997-3881320	0	+	3877997	3877997	8553170	3	161,117,13,	0,2702,3310,
#Deleted in new
chr6_GL000251v2_alt	3878049	3883135	chr6_GL000251v2_alt:3878049-3883135	1	+	3878076	3882033	789624	5	109,246,207,166,395,	0,2521,3333,3829,4691,
#Deleted in new
chr6_GL000251v2_alt	3897900	3911599	chr6_GL000251v2_alt:3897900-3911599	7	-	3897900	3897900	16724991	2	267,76,	0,13623,
#Deleted in new
chr6_GL000251v2_alt	3931431	3931580	chr6_GL000251v2_alt:3931431-3931580	3	-	3931431	3931431	8553170	1	149,	0,
#Deleted in new
chr6_GL000251v2_alt	3934008	3947126	chr6_GL000251v2_alt:3934008-3947126	3	-	3934337	3947049	0	6	343,24,111,282,270,177,	0,1142,1639,2434,4990,12941,
#Deleted in new
chr6_GL000251v2_alt	3969621	3969768	chr6_GL000251v2_alt:3969621-3969768	3	-	3969621	3969621	8553170	1	147,	0,
#Deleted in new
chr6_GL000251v2_alt	3973044	3987586	chr6_GL000251v2_alt:3973044-3987586	7	-	3973044	3973044	16724991	4	24,111,262,106,	0,500,1441,14436,
#Deleted in new
chr6_GL000251v2_alt	3995581	3995728	chr6_GL000251v2_alt:3995581-3995728	3	-	3995581	3995581	8553170	1	147,	0,
#Deleted in new
chr6_GL000251v2_alt	3998044	4011459	chr6_GL000251v2_alt:3998044-4011459	3	-	3998367	4011353	0	6	337,24,111,282,270,206,	0,1125,1624,2433,4945,13209,
#Deleted in new
chr6_GL000251v2_alt	4000477	4028652	chr6_GL000251v2_alt:4000477-4028652	0	-	4000477	4028652	789624	4	282,270,151,50,	0,2512,26229,28125,
#Deleted in new
chr6_GL000251v2_alt	4055483	4061663	chr6_GL000251v2_alt:4055483-4061663	3	+	4055517	4060876	789624	5	116,246,282,175,603,	0,3935,4593,5238,5577,
#Deleted in new
chr6_GL000251v2_alt	4072370	4079982	chr6_GL000251v2_alt:4072370-4079982	3	-	4073177	4079926	0	5	821,111,282,270,165,	0,1941,2568,5739,7447,
#Deleted in new
chr6_GL000251v2_alt	4072820	4073670	chr6_GL000251v2_alt:4072820-4073670	3	+	4072820	4072820	8553170	2	177,374,	0,476,
#Deleted in new
chr6_GL000251v2_alt	4072826	4075422	chr6_GL000251v2_alt:4072826-4075422	3	-	4072826	4072826	8553170	2	213,97,	0,2499,
#Deleted in new
chr6_GL000251v2_alt	4119434	4120266	chr6_GL000251v2_alt:4119434-4120266	7	-	4119434	4119434	16724991	1	832,	0,
#Deleted in new
chr6_GL000251v2_alt	4131284	4132107	chr6_GL000251v2_alt:4131284-4132107	0	+	4131284	4131284	8553170	2	143,238,	0,585,
#Deleted in new
chr6_GL000251v2_alt	4131309	4132112	chr6_GL000251v2_alt:4131309-4132112	3	+	4131309	4131309	8553170	3	118,35,243,	0,376,560,
#Deleted in new
chr6_GL000251v2_alt	4131664	4132115	chr6_GL000251v2_alt:4131664-4132115	0	+	4131664	4131664	8553170	2	56,246,	0,205,
#Deleted in new
chr6_GL000251v2_alt	4144012	4144950	chr6_GL000251v2_alt:4144012-4144950	7	-	4144012	4144012	16724991	2	80,277,	0,661,
#Deleted in new
chr6_GL000251v2_alt	4154913	4160989	chr6_GL000251v2_alt:4154913-4160989	1	+	4155015	4159967	789624	5	184,249,282,175,835,	0,3818,4450,4899,5241,
#Deleted in new
chr6_GL000251v2_alt	4169670	4177106	chr6_GL000251v2_alt:4169670-4177106	1	-	4170807	4177044	789624	5	1208,111,282,267,159,	0,1676,2753,5563,7277,
#Deleted in new
chr6_GL000251v2_alt	4169670	4177108	chr6_GL000251v2_alt:4169670-4177108	3	-	4170025	4177044	789624	6	369,24,111,282,267,161,	0,1184,1676,2753,5563,7277,
#Deleted in new
chr6_GL000251v2_alt	4169670	4177064	chr6_GL000251v2_alt:4169670-4177064	1	-	4170025	4177044	789624	5	369,24,282,267,117,	0,1184,2753,5563,7277,
#Deleted in new
chr6_GL000251v2_alt	4169960	4177040	chr6_GL000251v2_alt:4169960-4177040	0	-	4170025	4177040	789624	4	79,282,267,93,	0,2463,5273,6987,
#Deleted in new
chr6_GL000251v2_alt	4224963	4229249	chr6_GL000251v2_alt:4224963-4229249	3	-	4225416	4229152	0	6	489,32,111,282,270,188,	0,677,960,1557,2281,4098,
#Deleted in new
chr6_GL000251v2_alt	4224963	4229177	chr6_GL000251v2_alt:4224963-4229177	0	-	4227376	4229152	789624	6	489,32,111,282,158,116,	0,677,960,1557,2281,4098,
#Deleted in new
chr6_GL000251v2_alt	4225247	4229189	chr6_GL000251v2_alt:4225247-4229189	0	-	4225247	4225247	8553170	5	205,32,879,270,128,	0,393,676,1997,3814,
#Deleted in new
chr6_GL000251v2_alt	4226570	4229111	chr6_GL000251v2_alt:4226570-4229111	0	-	4226570	4229111	789624	3	223,270,50,	0,674,2491,
#Deleted in new
chr6_GL000251v2_alt	4234033	4250926	chr6_GL000251v2_alt:4234033-4250926	3	-	4234489	4250432	0	12	486,137,160,174,189,129,198,206,131,115,497,75,	0,7566,8096,8433,8784,10499,10793,13320,13808,15702,15906,16818,
#Deleted in new
chr6_GL000251v2_alt	4237609	4250969	chr6_GL000251v2_alt:4237609-4250969	1	-	4241054	4250432	789624	13	3496,126,137,160,174,189,129,198,206,131,115,497,118,	0,3499,3990,4520,4857,5208,6923,7217,9744,10232,12126,12330,13242,
#Deleted in new
chr6_GL000251v2_alt	4237614	4250979	chr6_GL000251v2_alt:4237614-4250979	1	-	4241105	4250432	0	12	3620,137,160,174,189,129,198,206,131,115,497,128,	0,3985,4515,4852,5203,6918,7212,9739,10227,12121,12325,13237,
#Deleted in new
chr6_GL000251v2_alt	4241143	4242927	chr6_GL000251v2_alt:4241143-4242927	0	-	4241143	4241143	8553170	4	91,137,160,461,	0,456,986,1323,
#Deleted in new
chr6_GL000251v2_alt	4244494	4244933	chr6_GL000251v2_alt:4244494-4244933	0	-	4244494	4244494	8553170	2	167,107,	0,332,
#Deleted in new
chr6_GL000251v2_alt	4252914	4256246	chr6_GL000251v2_alt:4252914-4256246	3	-	4253157	4256195	0	6	332,205,130,112,148,198,	0,815,1418,1956,2226,3134,
#Deleted in new
chr6_GL000251v2_alt	4252915	4256902	chr6_GL000251v2_alt:4252915-4256902	1	-	4253157	4256612	0	6	331,205,130,112,148,425,	0,814,1417,1955,2225,3562,
#Deleted in new
chr6_GL000251v2_alt	4252915	4256219	chr6_GL000251v2_alt:4252915-4256219	1	-	4253157	4256195	789624	6	331,205,130,40,148,171,	0,814,1417,1955,2225,3133,
#Deleted in new
chr6_GL000251v2_alt	4252915	4254233	chr6_GL000251v2_alt:4252915-4254233	0	-	4252915	4252915	8553170	2	331,504,	0,814,
#Deleted in new
chr6_GL000251v2_alt	4253219	4256850	chr6_GL000251v2_alt:4253219-4256850	0	-	4253219	4253219	8553170	5	27,205,130,418,373,	0,510,1113,1651,3258,
#Deleted in new
chr6_GL000251v2_alt	4256284	4258694	chr6_GL000251v2_alt:4256284-4258694	3	+	4256284	4256284	789624	2	189,1078,	0,1332,
#Deleted in new
chr6_GL000251v2_alt	4256306	4258018	chr6_GL000251v2_alt:4256306-4258018	0	+	4256306	4256306	8553170	3	167,301,490,	0,462,1222,
#Deleted in new
chr6_GL000251v2_alt	4256331	4258409	chr6_GL000251v2_alt:4256331-4258409	0	+	4256331	4256331	789624	3	142,61,793,	0,677,1285,
#Deleted in new
chr6_GL000251v2_alt	4256331	4258185	chr6_GL000251v2_alt:4256331-4258185	0	+	4256331	4256331	789624	3	142,226,569,	0,512,1285,
#Deleted in new
chr6_GL000251v2_alt	4256332	4257894	chr6_GL000251v2_alt:4256332-4257894	0	+	4256332	4256332	8553170	2	737,278,	0,1284,
#Deleted in new
chr6_GL000251v2_alt	4256334	4271784	chr6_GL000251v2_alt:4256334-4271784	1	+	4268345	4271731	789624	6	139,68,132,130,142,181,	0,12002,13127,13869,14228,15269,
#Deleted in new
chr6_GL000251v2_alt	4256336	4258277	chr6_GL000251v2_alt:4256336-4258277	0	+	4256336	4256336	8553170	2	137,749,	0,1192,
#Deleted in new
chr6_GL000251v2_alt	4257034	4270636	chr6_GL000251v2_alt:4257034-4270636	0	+	4268345	4270636	789624	5	35,68,132,130,74,	0,11302,12427,13169,13528,
#Deleted in new
chr6_GL000251v2_alt	4257407	4266177	chr6_GL000251v2_alt:4257407-4266177	3	-	4257777	4266015	0	11	577,137,163,174,189,129,198,206,131,115,940,	0,1859,2304,2710,3443,3781,5111,5735,6900,7179,7830,
#Deleted in new
chr6_GL000251v2_alt	4257407	4262341	chr6_GL000251v2_alt:4257407-4262341	0	-	4257407	4257407	8553170	5	577,137,163,174,1491,	0,1859,2304,2710,3443,
#Deleted in new
chr6_GL000251v2_alt	4257873	4260429	chr6_GL000251v2_alt:4257873-4260429	0	-	4257873	4257873	8553170	3	111,608,312,	0,1393,2244,
#Deleted in new
chr6_GL000251v2_alt	4266346	4271099	chr6_GL000251v2_alt:4266346-4271099	0	+	4266346	4266346	8553170	3	142,1997,537,	0,1990,4216,
#Deleted in new
chr6_GL000251v2_alt	4266359	4271784	chr6_GL000251v2_alt:4266359-4271784	1	+	4266428	4271731	0	6	129,68,132,130,142,181,	0,1977,3102,3844,4203,5244,
#Deleted in new
chr6_GL000251v2_alt	4266426	4291786	chr6_GL000251v2_alt:4266426-4291786	3	+	4266428	4291685	789624	6	62,68,130,142,93,145,	0,1910,3777,4136,22825,25215,
#Deleted in new
chr6_GL000251v2_alt	4268295	4270921	chr6_GL000251v2_alt:4268295-4270921	0	+	4268295	4268295	8553170	4	109,132,130,359,	0,1166,1908,2267,
#Deleted in new
chr6_GL000251v2_alt	4291369	4292047	chr6_GL000251v2_alt:4291369-4292047	7	-	4291369	4291369	16724991	1	678,	0,
#Deleted in new
chr6_GL000251v2_alt	4291414	4292032	chr6_GL000251v2_alt:4291414-4292032	5	-	4291414	4291414	16724991	1	618,	0,
#Deleted in new
chr6_GL000251v2_alt	4308610	4308685	chr6_GL000251v2_alt:4308610-4308685	7	+	4308610	4308610	16724991	1	75,	0,
#Deleted in new
chr6_GL000251v2_alt	4346823	4353216	chr6_GL000251v2_alt:4346823-4353216	1	-	4347182	4353002	789624	5	390,121,285,282,269,	0,903,2543,4055,6124,
#Deleted in new
chr6_GL000251v2_alt	4346823	4353265	chr6_GL000251v2_alt:4346823-4353265	1	-	4347165	4353002	0	6	359,36,117,285,282,318,	0,713,907,2543,4055,6124,
#Deleted in new
chr6_GL000251v2_alt	4346823	4349634	chr6_GL000251v2_alt:4346823-4349634	0	-	4347165	4349634	789624	3	359,36,268,	0,713,2543,
#Deleted in new
chr6_GL000251v2_alt	4346823	4350883	chr6_GL000251v2_alt:4346823-4350883	0	-	4347165	4350883	789624	4	359,117,285,5,	0,907,2543,4055,
#Deleted in new
chr6_GL000251v2_alt	4346823	4353179	chr6_GL000251v2_alt:4346823-4353179	0	-	4346823	4346823	8553170	2	4337,232,	0,6124,
#Deleted in new
chr6_GL000251v2_alt	4346823	4349096	chr6_GL000251v2_alt:4346823-4349096	2	-	4346823	4346823	8553170	2	359,1560,	0,713,
#Deleted in new
chr6_GL000251v2_alt	4346823	4349081	chr6_GL000251v2_alt:4346823-4349081	0	-	4346823	4346823	8553170	3	359,36,1351,	0,713,907,
#Deleted in new
chr6_GL000251v2_alt	4349558	4365322	chr6_GL000251v2_alt:4349558-4365322	0	-	4349558	4365236	789624	4	93,282,63,174,	0,1320,3389,15590,
#Deleted in new
chr6_GL000251v2_alt	4360809	4365308	chr6_GL000251v2_alt:4360809-4365308	1	-	4361063	4365236	789624	5	259,129,177,285,160,	0,661,1001,1909,4339,
#Deleted in new
chr6_GL000251v2_alt	4360809	4365261	chr6_GL000251v2_alt:4360809-4365261	1	-	4361063	4365236	789624	4	259,129,279,113,	0,661,1001,4339,
#Deleted in new
chr6_GL000251v2_alt	4360809	4365322	chr6_GL000251v2_alt:4360809-4365322	3	-	4361063	4365236	0	5	259,129,279,285,174,	0,661,1001,1909,4339,
#Deleted in new
chr6_GL000251v2_alt	4360809	4361871	chr6_GL000251v2_alt:4360809-4361871	0	-	4360809	4360809	8553170	2	259,401,	0,661,
#Deleted in new
chr6_GL000251v2_alt	4360809	4365308	chr6_GL000251v2_alt:4360809-4365308	0	-	4360809	4360809	8553170	4	259,126,1193,160,	0,664,1001,4339,
#Deleted in new
chr6_GL000251v2_alt	4360937	4382925	chr6_GL000251v2_alt:4360937-4382925	0	-	4360937	4360937	8553170	5	131,129,15,285,138,	0,533,873,1781,21850,
#Deleted in new
chr6_GL000251v2_alt	4360970	4380653	chr6_GL000251v2_alt:4360970-4380653	0	-	4360970	4360970	8553170	4	98,129,279,300,	0,500,840,19383,
#Deleted in new
chr6_GL000251v2_alt	4361470	4364661	chr6_GL000251v2_alt:4361470-4364661	0	-	4361470	4364661	789624	4	129,279,285,178,	0,340,1248,3013,
#Deleted in new
chr6_GL000251v2_alt	4361856	4381303	chr6_GL000251v2_alt:4361856-4381303	0	-	4361856	4362992	789624	3	233,285,93,	0,862,19354,
#Deleted in new
chr6_GL000251v2_alt	4362283	4365234	chr6_GL000251v2_alt:4362283-4365234	0	-	4362283	4362283	8553170	3	720,178,86,	0,2200,2865,
#Deleted in new
chr6_GL000251v2_alt	4380868	4393720	chr6_GL000251v2_alt:4380868-4393720	3	+	4385107	4392933	0	13	397,1333,304,138,139,215,375,129,249,263,305,123,924,	0,2935,5802,6726,7373,7592,7904,8784,9099,9468,11174,11688,11928,
#Deleted in new
chr6_GL000251v2_alt	4381466	4384350	chr6_GL000251v2_alt:4381466-4384350	0	+	4381466	4381466	8553170	2	95,547,	0,2337,
#Deleted in new
chr6_GL000251v2_alt	4381527	4388829	chr6_GL000251v2_alt:4381527-4388829	0	+	4381527	4388829	789624	6	34,304,138,139,215,57,	0,5143,6067,6714,6933,7245,
#Deleted in new
chr6_GL000251v2_alt	4382511	4383026	chr6_GL000251v2_alt:4382511-4383026	3	+	4382511	4382511	8553170	2	131,67,	0,448,
#Deleted in new
chr6_GL000251v2_alt	4383096	4393720	chr6_GL000251v2_alt:4383096-4393720	1	+	4385107	4392933	0	13	310,1333,304,138,139,215,375,129,249,263,305,123,924,	0,707,3574,4498,5145,5364,5676,6556,6871,7240,8946,9460,9700,
#Deleted in new
chr6_GL000251v2_alt	4383138	4390408	chr6_GL000251v2_alt:4383138-4390408	0	+	4385107	4389476	789624	10	268,1333,304,138,139,215,375,311,249,72,	0,665,3532,4456,5103,5322,5634,6332,6829,7198,
#Deleted in new
chr6_GL000251v2_alt	4383161	4393720	chr6_GL000251v2_alt:4383161-4393720	0	+	4385107	4387613	789624	14	245,1333,304,92,138,139,215,375,129,249,263,305,123,924,	0,642,3509,4068,4433,5080,5299,5611,6491,6806,7175,8881,9395,9635,
#Deleted in new
chr6_GL000251v2_alt	4384938	4393720	chr6_GL000251v2_alt:4384938-4393720	1	+	4385107	4392933	0	13	198,304,138,139,215,375,129,249,263,105,305,123,924,	0,1732,2656,3303,3522,3834,4714,5029,5398,6364,7104,7618,7858,
#Deleted in new
chr6_GL000251v2_alt	4385292	4393720	chr6_GL000251v2_alt:4385292-4393720	0	+	4385292	4392933	789624	12	46,304,138,139,215,375,129,249,263,305,123,924,	0,1378,2302,2949,3168,3480,4360,4675,5044,6750,7264,7504,
#Deleted in new
chr6_GL000251v2_alt	4388352	4390425	chr6_GL000251v2_alt:4388352-4390425	0	+	4388352	4388352	8553170	5	28,215,1009,249,89,	0,108,420,1615,1984,
#Deleted in new
chr6_GL000251v2_alt	4388779	4390112	chr6_GL000251v2_alt:4388779-4390112	0	+	4388779	4389672	789624	3	368,154,145,	0,848,1188,
#Deleted in new
chr6_GL000251v2_alt	4389760	4391012	chr6_GL000251v2_alt:4389760-4391012	0	+	4389760	4389760	8553170	3	21,249,676,	0,207,576,
#Deleted in new
chr6_GL000251v2_alt	4391754	4393501	chr6_GL000251v2_alt:4391754-4393501	0	+	4391754	4391754	8553170	2	925,705,	0,1042,
#Deleted in new
chr6_GL000251v2_alt	4391896	4392981	chr6_GL000251v2_alt:4391896-4392981	0	+	4391896	4391896	8553170	3	451,123,185,	0,660,900,
#Deleted in new
chr6_GL000251v2_alt	4416345	4421780	chr6_GL000251v2_alt:4416345-4421780	3	-	4419005	4421704	0	5	2664,136,282,249,158,	0,2902,3133,3835,5277,
#Deleted in new
chr6_GL000251v2_alt	4418774	4419552	chr6_GL000251v2_alt:4418774-4419552	0	-	4418774	4418774	8553170	3	235,136,31,	0,473,747,
#Deleted in new
chr6_GL000251v2_alt	4418968	4420222	chr6_GL000251v2_alt:4418968-4420222	0	-	4418968	4418968	8553170	3	41,513,42,	0,279,1212,
#Deleted in new
chr6_GL000251v2_alt	4419612	4420292	chr6_GL000251v2_alt:4419612-4420292	0	-	4419612	4419612	8553170	2	433,112,	0,568,
#Deleted in new
chr6_GL000251v2_alt	4419664	4421747	chr6_GL000251v2_alt:4419664-4421747	0	-	4419664	4421704	789624	3	96,82,125,	0,516,1958,
#Deleted in new
chr6_GL000251v2_alt	4420228	4421750	chr6_GL000251v2_alt:4420228-4421750	0	-	4420228	4420228	8553170	2	344,128,	0,1394,
#Deleted in new
chr6_GL000251v2_alt	4476419	4485473	chr6_GL000251v2_alt:4476419-4485473	3	-	4480500	4485421	0	5	779,167,282,246,152,	0,4069,4450,5072,8902,
#Deleted in new
chr6_GL000251v2_alt	4476857	4485466	chr6_GL000251v2_alt:4476857-4485466	0	-	4476857	4476857	8553170	2	4880,145,	0,8464,
#Deleted in new
chr6_GL000251v2_alt	4479510	4481099	chr6_GL000251v2_alt:4479510-4481099	0	-	4480500	4481099	789624	2	1145,230,	0,1359,
#Deleted in new
chr6_GL000251v2_alt	4480548	4485488	chr6_GL000251v2_alt:4480548-4485488	0	-	4480548	4485421	789624	4	107,271,158,167,	0,321,1031,4773,
#Deleted in new
chr6_GL000251v2_alt	4480869	4492617	chr6_GL000251v2_alt:4480869-4492617	0	-	4480869	4485421	789624	4	282,246,302,88,	0,622,4452,11660,
#Deleted in new
chr6_GL000251v2_alt	4480954	4492605	chr6_GL000251v2_alt:4480954-4492605	0	-	4480954	4480954	8553170	3	197,246,76,	0,537,11575,
#Deleted in new
chr6_GL000251v2_alt	4481012	4485484	chr6_GL000251v2_alt:4481012-4485484	0	-	4481012	4481012	8553170	3	139,246,195,	0,479,4277,
#Deleted in new
chr6_GL000251v2_alt	4485352	4492625	chr6_GL000251v2_alt:4485352-4492625	0	-	4485352	4485421	789624	2	209,96,	0,7177,
#Deleted in new
chr6_GL000251v2_alt	4487776	4498987	chr6_GL000251v2_alt:4487776-4498987	1	+	4487892	4498024	789624	6	216,264,282,111,24,663,	0,4745,8959,9788,10228,10548,
#Deleted in new
chr6_GL000251v2_alt	4487822	4498987	chr6_GL000251v2_alt:4487822-4498987	1	+	4487892	4498024	789624	6	170,264,192,111,24,663,	0,4699,9003,9742,10182,10502,
#Deleted in new
chr6_GL000251v2_alt	4487860	4493082	chr6_GL000251v2_alt:4487860-4493082	0	+	4487860	4487860	8553170	2	132,561,	0,4661,
#Deleted in new
chr6_GL000251v2_alt	4491300	4491710	chr6_GL000251v2_alt:4491300-4491710	7	+	4491300	4491300	16724991	1	410,	0,
#Deleted in new
chr6_GL000251v2_alt	4492235	4496743	chr6_GL000251v2_alt:4492235-4496743	0	+	4492235	4492235	8553170	3	149,264,8,	0,286,4500,
#Deleted in new
chr6_GL000251v2_alt	4492235	4495852	chr6_GL000251v2_alt:4492235-4495852	0	+	4492235	4492235	8553170	3	149,264,489,	0,286,3128,
#Deleted in new
chr6_GL000251v2_alt	4492292	4497017	chr6_GL000251v2_alt:4492292-4497017	0	+	4492292	4492292	8553170	2	493,282,	0,4443,
#Deleted in new
chr6_GL000251v2_alt	4492336	4497675	chr6_GL000251v2_alt:4492336-4497675	0	+	4492336	4497675	789624	4	48,247,282,111,	0,202,4399,5228,
#Deleted in new
chr6_GL000251v2_alt	4492521	4498987	chr6_GL000251v2_alt:4492521-4498987	0	+	4492521	4498333	789624	5	264,282,128,24,663,	0,4214,5043,5483,5803,
#Deleted in new
chr6_GL000251v2_alt	4492790	4495740	chr6_GL000251v2_alt:4492790-4495740	2	+	4492790	4492790	8553170	3	291,132,377,	0,1066,2573,
#Deleted in new
chr6_GL000251v2_alt	4503525	4509112	chr6_GL000251v2_alt:4503525-4509112	7	-	4503525	4503525	16724991	4	151,282,245,55,	0,366,1140,5532,
#Deleted in new
chr6_GL000251v2_alt	4515548	4519104	chr6_GL000251v2_alt:4515548-4519104	7	-	4515548	4515548	16724991	6	39,60,167,211,136,63,	0,144,2192,2805,3131,3493,
#Deleted in new
chr6_GL000251v2_alt	4524221	4530930	chr6_GL000251v2_alt:4524221-4530930	5	+	4524221	4524221	16724991	3	165,264,760,	0,4515,5949,
#Deleted in new
chr6_GL000251v2_alt	4524286	4540543	chr6_GL000251v2_alt:4524286-4540543	7	+	4524286	4524286	16724991	5	100,264,271,111,20,	0,4450,14995,15806,16237,
#Deleted in new
chr6_GL000251v2_alt	4542672	4554810	chr6_GL000251v2_alt:4542672-4554810	7	-	4542672	4542672	16724991	2	127,102,	0,12036,
#Deleted in new
chr6_GL000251v2_alt	4556274	4559268	chr6_GL000251v2_alt:4556274-4559268	3	+	4556274	4556274	8553170	2	164,552,	0,2442,
#Deleted in new
chr6_GL000251v2_alt	4574188	4604006	chr6_GL000251v2_alt:4574188-4604006	3	-	4575185	4603747	789624	64	1138,207,113,268,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,87,75,63,42,60,63,192,163,211,150,341,	0,1586,2171,2868,3250,3490,3832,4039,4389,4583,4745,5118,5838,6025,6275,6703,7151,7367,7646,7877,8130,8433,8590,8786,9032,9369,9608,9849,10379,10667,10821,11020,11192,11330,11484,11845,12892,13334,13577,13751,14039,14310,14499,14730,14980,15450,15626,15753,15997,16238,16391,16549,16749,17037,17576,17986,18282,18429,22310,23945,25680,26296,26638,29477,
#Deleted in new
chr6_GL000251v2_alt	4574199	4603975	chr6_GL000251v2_alt:4574199-4603975	1	-	4575185	4603747	789624	66	1127,207,113,268,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,87,75,63,42,60,180,63,78,192,163,211,150,310,	0,1575,2160,2857,3239,3479,3821,4028,4378,4572,4734,5107,5827,6014,6264,6692,7140,7356,7635,7866,8119,8422,8579,8775,9021,9358,9597,9838,10368,10656,10810,11009,11181,11319,11473,11834,12881,13323,13566,13740,14028,14299,14488,14719,14969,15439,15615,15742,15986,16227,16380,16538,16738,17026,17565,17975,18271,18418,21452,22299,23008,23934,25669,26285,26627,29466,
#Deleted in new
chr6_GL000251v2_alt	4574199	4603975	chr6_GL000251v2_alt:4574199-4603975	1	-	4575185	4603747	789624	63	1127,207,113,268,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,87,75,63,42,60,192,163,211,150,310,	0,1575,2160,2857,3239,3479,3821,4028,4378,4572,4734,5107,5827,6014,6264,6692,7140,7356,7635,7866,8119,8422,8579,8775,9021,9358,9597,9838,10368,10656,10810,11009,11181,11319,11473,11834,12881,13323,13566,13740,14028,14299,14488,14719,14969,15439,15615,15742,15986,16227,16380,16538,16738,17026,17565,17975,18271,18418,23934,25669,26285,26627,29466,
#Deleted in new
chr6_GL000251v2_alt	4574202	4589400	chr6_GL000251v2_alt:4574202-4589400	0	-	4575185	4589400	789624	9	1124,207,113,268,37,45,54,45,91,	0,1572,2157,2854,14313,14485,14716,14966,15107,
#Deleted in new
chr6_GL000251v2_alt	4589638	4603974	chr6_GL000251v2_alt:4589638-4603974	0	-	4589638	4603747	789624	21	54,45,54,54,54,54,54,57,87,75,63,42,60,180,63,78,192,163,211,150,309,	0,176,303,547,788,941,1099,1299,1587,2126,2536,2832,2979,6013,6860,7569,8495,10230,10846,11188,14027,
#Deleted in new
chr6_GL000251v2_alt	4597951	4603961	chr6_GL000251v2_alt:4597951-4603961	1	-	4598058	4603747	789624	5	374,163,211,150,296,	0,1917,2533,2875,5714,
#Deleted in new
chr6_GL000251v2_alt	4605094	4612193	chr6_GL000251v2_alt:4605094-4612193	3	-	4606188	4611981	0	10	1242,106,92,133,130,173,180,157,248,447,	0,1357,1775,1982,2319,2846,4174,4720,5579,6652,
#Deleted in new
chr6_GL000251v2_alt	4605094	4612119	chr6_GL000251v2_alt:4605094-4612119	1	-	4606188	4611981	0	10	1242,106,104,133,130,173,180,157,248,373,	0,1357,1775,1982,2319,2846,4174,4720,5579,6652,
#Deleted in new
chr6_GL000251v2_alt	4605726	4612142	chr6_GL000251v2_alt:4605726-4612142	0	-	4609966	4611981	789624	9	610,106,92,133,130,173,180,157,396,	0,725,1143,1350,1687,2214,3542,4088,6020,
#Deleted in new
chr6_GL000251v2_alt	4606076	4612358	chr6_GL000251v2_alt:4606076-4612358	1	-	4606188	4612287	789624	9	260,106,104,133,130,173,180,54,87,	0,375,793,1000,1337,1864,3192,3738,6195,
#Deleted in new
chr6_GL000251v2_alt	4606170	4606867	chr6_GL000251v2_alt:4606170-4606867	0	-	4606170	4606170	8553170	2	166,416,	0,281,
#Deleted in new
chr6_GL000251v2_alt	4606555	4607945	chr6_GL000251v2_alt:4606555-4607945	0	-	4606869	4607945	789624	5	2,92,58,130,5,	0,314,521,858,1385,
#Deleted in new
chr6_GL000251v2_alt	4607117	4612167	chr6_GL000251v2_alt:4607117-4612167	0	-	4607117	4607117	8553170	5	426,173,180,54,421,	0,823,2151,2697,4629,
#Deleted in new
chr6_GL000251v2_alt	4607291	4610142	chr6_GL000251v2_alt:4607291-4610142	0	-	4607291	4607291	8553170	3	822,180,328,	0,1977,2523,
#Deleted in new
chr6_GL000251v2_alt	4611105	4611201	chr6_GL000251v2_alt:4611105-4611201	3	+	4611105	4611105	8553170	1	96,	0,
#Deleted in new
chr6_GL000251v2_alt	4611949	4614197	chr6_GL000251v2_alt:4611949-4614197	0	+	4612302	4614197	789624	5	494,169,54,165,133,	0,1300,1627,1818,2115,
#Deleted in new
chr6_GL000251v2_alt	4612330	4615944	chr6_GL000251v2_alt:4612330-4615944	3	+	4612750	4615318	789624	8	113,415,169,54,165,141,197,899,	0,416,919,1246,1437,1734,2084,2715,
#Deleted in new
chr6_GL000251v2_alt	4612377	4615944	chr6_GL000251v2_alt:4612377-4615944	1	+	4612750	4615318	789624	7	784,169,54,165,141,197,899,	0,872,1199,1390,1687,2037,2668,
#Deleted in new
chr6_GL000251v2_alt	4612429	4615944	chr6_GL000251v2_alt:4612429-4615944	0	+	4612429	4612429	8553170	4	732,169,51,544,	0,820,1147,2971,
#Deleted in new
chr6_GL000251v2_alt	4612750	4615944	chr6_GL000251v2_alt:4612750-4615944	0	+	4612750	4612750	8553170	5	411,169,54,32,439,	0,499,826,1017,2755,
#Deleted in new
chr6_GL000251v2_alt	4613759	4615944	chr6_GL000251v2_alt:4613759-4615944	0	+	4613759	4613759	8553170	4	173,141,197,899,	0,305,655,1286,
#Deleted in new
chr6_GL000251v2_alt	4616146	4618332	chr6_GL000251v2_alt:4616146-4618332	3	+	4616173	4618155	0	9	79,218,117,93,86,85,43,75,194,	0,260,579,805,998,1186,1488,1729,1992,
#Deleted in new
chr6_GL000251v2_alt	4616190	4617950	chr6_GL000251v2_alt:4616190-4617950	0	+	4616190	4616190	8553170	7	434,117,93,86,85,43,75,	0,535,761,954,1142,1444,1685,
#Deleted in new
chr6_GL000251v2_alt	4619997	4624223	chr6_GL000251v2_alt:4619997-4624223	3	+	4620323	4623900	789624	7	148,136,161,216,390,274,425,	0,268,1129,1418,2661,3232,3801,
#Deleted in new
chr6_GL000251v2_alt	4621060	4624223	chr6_GL000251v2_alt:4621060-4624223	0	+	4621060	4621060	8553170	5	227,216,390,274,425,	0,355,1598,2169,2738,
#Deleted in new
chr6_GL000251v2_alt	4627205	4627829	chr6_GL000251v2_alt:4627205-4627829	7	+	4627205	4627205	16724991	1	624,	0,
#Deleted in new
chr6_GL000251v2_alt	4649315	4651207	chr6_GL000251v2_alt:4649315-4651207	7	+	4649315	4649315	16724991	3	553,145,286,	0,837,1606,
#Deleted in new
chr6_GL000251v2_alt	4661030	4666441	chr6_GL000251v2_alt:4661030-4666441	3	+	4661030	4661030	789624	5	122,100,96,194,247,	0,256,1082,1979,5164,
#Deleted in new
chr6_GL000251v2_alt	4661080	4663436	chr6_GL000251v2_alt:4661080-4663436	0	+	4661080	4661080	8553170	4	72,100,103,427,	0,206,1025,1929,
#Deleted in new
chr6_GL000251v2_alt	4661092	4666486	chr6_GL000251v2_alt:4661092-4666486	0	+	4661092	4661092	8553170	5	60,100,96,129,292,	0,194,1020,1982,5102,
#Deleted in new
chr6_GL000251v2_alt	4661768	4683375	chr6_GL000251v2_alt:4661768-4683375	3	-	4662337	4683156	789624	20	716,119,112,66,108,96,124,119,156,134,58,133,101,151,176,68,76,53,85,309,	0,1246,1588,13196,13484,13720,14086,14494,16269,16900,17394,17577,17820,18211,18726,19202,19456,19711,19911,21298,
#Deleted in new
chr6_GL000251v2_alt	4661768	4683357	chr6_GL000251v2_alt:4661768-4683357	0	-	4682889	4683156	789624	19	716,119,112,66,108,96,124,119,156,134,58,133,101,151,176,68,76,85,740,	0,1246,1588,13196,13484,13720,14086,14494,16269,16900,17394,17577,17820,18211,18726,19202,19456,19911,20849,
#Deleted in new
chr6_GL000251v2_alt	4661768	4683528	chr6_GL000251v2_alt:4661768-4683528	0	-	4661768	4661768	8553170	18	716,119,112,66,108,96,124,119,156,133,101,151,176,68,76,53,85,143,	0,1246,1588,13196,13484,13720,14086,14494,16269,17577,17820,18211,18726,19202,19456,19711,19911,21617,
#Deleted in new
chr6_GL000251v2_alt	4661775	4663132	chr6_GL000251v2_alt:4661775-4663132	0	+	4661775	4661775	8553170	2	433,36,	0,1321,
#Deleted in new
chr6_GL000251v2_alt	4662102	4675094	chr6_GL000251v2_alt:4662102-4675094	0	-	4662102	4662102	8553170	4	382,119,112,130,	0,912,1254,12862,
#Deleted in new
chr6_GL000251v2_alt	4662307	4675784	chr6_GL000251v2_alt:4662307-4675784	0	-	4662307	4662307	8553170	6	177,119,112,66,108,296,	0,707,1049,12657,12945,13181,
#Deleted in new
chr6_GL000251v2_alt	4663413	4676045	chr6_GL000251v2_alt:4663413-4676045	0	-	4663413	4663413	8553170	5	55,66,97,96,191,	0,11551,11850,12075,12441,
#Deleted in new
chr6_GL000251v2_alt	4675028	4675703	chr6_GL000251v2_alt:4675028-4675703	0	-	4675028	4675028	8553170	2	332,215,	0,460,
#Deleted in new
chr6_GL000251v2_alt	4675559	4678746	chr6_GL000251v2_alt:4675559-4678746	0	-	4675559	4675559	8553170	4	25,527,156,78,	0,295,2478,3109,
#Deleted in new
chr6_GL000251v2_alt	4678946	4679634	chr6_GL000251v2_alt:4678946-4679634	0	-	4678946	4678946	8553170	3	274,133,46,	0,399,642,
#Deleted in new
chr6_GL000251v2_alt	4679350	4683258	chr6_GL000251v2_alt:4679350-4683258	0	-	4679350	4679350	8553170	9	128,101,151,176,68,76,53,85,87,	0,238,629,1144,1620,1874,2129,2329,3821,
#Deleted in new
chr6_GL000251v2_alt	4679351	4683365	chr6_GL000251v2_alt:4679351-4683365	0	-	4679351	4679351	8553170	9	127,101,151,205,68,76,53,85,194,	0,237,628,1143,1619,1873,2128,2328,3820,
#Deleted in new
chr6_GL000251v2_alt	4683490	4687991	chr6_GL000251v2_alt:4683490-4687991	3	+	4683600	4687947	0	6	113,99,87,102,92,120,	0,618,3787,3955,4166,4381,
#Deleted in new
chr6_GL000251v2_alt	4683555	4687991	chr6_GL000251v2_alt:4683555-4687991	1	+	4687466	4687947	789624	6	48,140,87,102,92,120,	0,512,3722,3890,4101,4316,
#Deleted in new
chr6_GL000251v2_alt	4683568	4687986	chr6_GL000251v2_alt:4683568-4687986	0	+	4683568	4683568	8553170	5	35,99,87,303,115,	0,540,3709,3877,4303,
#Deleted in new
chr6_GL000251v2_alt	4683576	4687991	chr6_GL000251v2_alt:4683576-4687991	1	+	4687466	4687947	789624	7	27,99,158,87,102,92,120,	0,532,3404,3701,3869,4080,4295,
#Deleted in new
chr6_GL000251v2_alt	4683579	4687986	chr6_GL000251v2_alt:4683579-4687986	0	+	4683579	4683579	8553170	5	24,99,87,102,330,	0,529,3698,3866,4077,
#Deleted in new
chr6_GL000251v2_alt	4683612	4687991	chr6_GL000251v2_alt:4683612-4687991	0	+	4683612	4683612	8553170	5	595,87,102,92,120,	0,3665,3833,4044,4259,
#Deleted in new
chr6_GL000251v2_alt	4686801	4687991	chr6_GL000251v2_alt:4686801-4687991	0	+	4686801	4686801	8553170	2	563,546,	0,644,
#Deleted in new
chr6_GL000251v2_alt	4687346	4687991	chr6_GL000251v2_alt:4687346-4687991	0	+	4687346	4687346	8553170	3	201,92,120,	0,310,525,
#Deleted in new
chr6_GL000251v2_alt	4688612	4690306	chr6_GL000251v2_alt:4688612-4690306	3	+	4688900	4690037	789624	1	1694,	0,
#Deleted in new
chr6_GL000251v2_alt	4690588	4701012	chr6_GL000251v2_alt:4690588-4701012	3	-	4690756	4700655	789624	15	267,114,96,95,314,100,136,151,105,62,88,113,81,210,426,	0,389,656,1320,1566,7691,7987,8251,8510,8861,9044,9254,9510,9700,9998,
#Deleted in new
chr6_GL000251v2_alt	4690588	4692332	chr6_GL000251v2_alt:4690588-4692332	0	-	4690588	4690588	8553170	4	503,96,95,178,	0,656,1320,1566,
#Deleted in new
chr6_GL000251v2_alt	4690588	4692392	chr6_GL000251v2_alt:4690588-4692392	0	-	4690588	4690588	8553170	5	267,114,96,95,97,	0,389,656,1320,1707,
#Deleted in new
chr6_GL000251v2_alt	4690588	4692003	chr6_GL000251v2_alt:4690588-4692003	0	-	4690588	4690588	8553170	3	240,96,95,	0,656,1320,
#Deleted in new
chr6_GL000251v2_alt	4691051	4698914	chr6_GL000251v2_alt:4691051-4698914	0	-	4691051	4691051	8553170	6	40,96,560,100,136,75,	0,193,857,7228,7524,7788,
#Deleted in new
chr6_GL000251v2_alt	4692396	4700372	chr6_GL000251v2_alt:4692396-4700372	0	-	4692396	4700372	789624	10	72,100,136,151,105,38,88,113,81,84,	0,5883,6179,6443,6702,7053,7236,7446,7702,7892,
#Deleted in new
chr6_GL000251v2_alt	4698727	4699511	chr6_GL000251v2_alt:4698727-4699511	0	-	4698727	4698727	8553170	2	476,62,	0,722,
#Deleted in new
chr6_GL000251v2_alt	4698976	4700732	chr6_GL000251v2_alt:4698976-4700732	0	-	4698976	4698976	8553170	7	14,105,62,323,81,210,146,	0,122,473,656,1122,1312,1610,
#Deleted in new
chr6_GL000251v2_alt	4699148	4700687	chr6_GL000251v2_alt:4699148-4700687	0	-	4699148	4699148	8553170	7	55,62,88,113,131,210,101,	0,301,484,694,900,1140,1438,
#Deleted in new
chr6_GL000251v2_alt	4699540	4700497	chr6_GL000251v2_alt:4699540-4700497	0	-	4699540	4699540	8553170	4	180,113,81,209,	0,302,558,748,
#Deleted in new
chr6_GL000251v2_alt	4700786	4702418	chr6_GL000251v2_alt:4700786-4702418	1	+	4701341	4702330	789624	5	319,151,71,125,218,	0,468,872,1024,1414,
#Deleted in new
chr6_GL000251v2_alt	4701079	4702418	chr6_GL000251v2_alt:4701079-4702418	1	+	4701341	4702330	789624	4	326,71,125,218,	0,579,731,1121,
#Deleted in new
chr6_GL000251v2_alt	4701080	4702360	chr6_GL000251v2_alt:4701080-4702360	0	+	4701080	4701080	8553170	4	33,151,71,550,	0,174,578,730,
#Deleted in new
chr6_GL000251v2_alt	4701081	4702347	chr6_GL000251v2_alt:4701081-4702347	1	+	4701341	4702330	789624	5	32,146,71,125,147,	0,178,577,729,1119,
#Deleted in new
chr6_GL000251v2_alt	4701081	4702419	chr6_GL000251v2_alt:4701081-4702419	1	+	4701341	4702330	789624	5	32,151,71,125,219,	0,173,577,729,1119,
#Deleted in new
chr6_GL000251v2_alt	4701111	4702353	chr6_GL000251v2_alt:4701111-4702353	0	+	4701111	4701111	8553170	2	294,695,	0,547,
#Deleted in new
chr6_GL000251v2_alt	4701259	4709886	chr6_GL000251v2_alt:4701259-4709886	3	+	4701341	4708365	789624	4	146,71,125,1573,	0,399,551,7054,
#Deleted in new
chr6_GL000251v2_alt	4703138	4710809	chr6_GL000251v2_alt:4703138-4710809	3	-	4703586	4710095	789624	18	660,115,291,112,96,122,33,75,69,85,104,252,298,51,179,84,197,455,	0,776,1362,1759,1950,2141,2380,3034,3323,3473,3665,3854,4374,4760,4944,5378,6801,7216,
#Deleted in new
chr6_GL000251v2_alt	4703138	4710006	chr6_GL000251v2_alt:4703138-4710006	0	-	4703138	4703138	8553170	16	660,115,291,287,122,33,75,69,85,104,252,298,51,179,84,67,	0,776,1362,1759,2141,2380,3034,3323,3473,3665,3854,4374,4760,4944,5378,6801,
#Deleted in new
chr6_GL000251v2_alt	4703138	4708588	chr6_GL000251v2_alt:4703138-4708588	0	-	4703138	4703138	8553170	15	660,115,291,112,96,122,33,75,69,85,104,252,51,179,72,	0,776,1362,1759,1950,2141,2380,3034,3323,3473,3665,3854,4760,4944,5378,
#Deleted in new
chr6_GL000251v2_alt	4703138	4710415	chr6_GL000251v2_alt:4703138-4710415	0	-	4703138	4703138	8553170	17	660,115,291,112,96,122,33,75,69,85,104,252,298,51,179,84,61,	0,776,1362,1759,1950,2141,2380,3034,3323,3473,3665,3854,4374,4760,4944,5378,7216,
#Deleted in new
chr6_GL000251v2_alt	4703138	4710460	chr6_GL000251v2_alt:4703138-4710460	0	-	4703138	4703138	8553170	17	660,115,291,112,96,122,33,75,69,85,104,816,50,179,84,197,106,	0,776,1362,1759,1950,2141,2380,3034,3323,3473,3665,3854,4761,4944,5378,6801,7216,
#Deleted in new
chr6_GL000251v2_alt	4703590	4705415	chr6_GL000251v2_alt:4703590-4705415	0	-	4703590	4703590	8553170	5	208,115,291,287,136,	0,324,910,1307,1689,
#Deleted in new
chr6_GL000251v2_alt	4704579	4707108	chr6_GL000251v2_alt:4704579-4707108	0	-	4704579	4704579	8553170	9	212,112,96,272,75,69,85,104,116,	0,318,509,700,1593,1882,2032,2224,2413,
#Deleted in new
chr6_GL000251v2_alt	4707171	4709471	chr6_GL000251v2_alt:4707171-4709471	0	-	4707171	4707171	8553170	5	639,51,179,84,56,	0,727,911,1345,2244,
#Deleted in new
chr6_GL000251v2_alt	4707290	4709478	chr6_GL000251v2_alt:4707290-4709478	0	-	4707290	4707290	8553170	6	520,51,179,84,130,63,	0,608,792,1226,1408,2125,
#Deleted in new
chr6_GL000251v2_alt	4707583	4709177	chr6_GL000251v2_alt:4707583-4709177	0	-	4707583	4707583	8553170	5	227,51,179,84,479,	0,315,499,933,1115,
#Deleted in new
chr6_GL000251v2_alt	4707641	4708871	chr6_GL000251v2_alt:4707641-4708871	0	-	4707641	4707641	8553170	4	169,51,179,355,	0,257,441,875,
#Deleted in new
chr6_GL000251v2_alt	4707928	4710295	chr6_GL000251v2_alt:4707928-4710295	0	-	4707928	4710095	789624	4	21,179,84,356,	0,154,588,2011,
#Deleted in new
chr6_GL000251v2_alt	4711178	4725734	chr6_GL000251v2_alt:4711178-4725734	1	-	4713251	4725524	789624	9	2085,35,90,342,399,54,261,171,247,	0,4270,4443,4612,5304,8416,13521,13998,14309,
#Deleted in new
chr6_GL000251v2_alt	4711178	4725870	chr6_GL000251v2_alt:4711178-4725870	3	-	4713251	4725524	0	8	2085,35,90,342,399,261,171,383,	0,4270,4443,4612,5304,13521,13998,14309,
#Deleted in new
chr6_GL000251v2_alt	4711178	4725727	chr6_GL000251v2_alt:4711178-4725727	0	-	4711178	4711178	8553170	7	2085,35,90,85,181,171,240,	0,4270,4443,4612,13601,13998,14309,
#Deleted in new
chr6_GL000251v2_alt	4711215	4725539	chr6_GL000251v2_alt:4711215-4725539	0	-	4711215	4711215	8553170	6	364,90,399,261,171,52,	0,4827,5267,13484,13961,14272,
#Deleted in new
chr6_GL000251v2_alt	4715130	4725695	chr6_GL000251v2_alt:4715130-4725695	1	-	4715268	4725524	0	7	353,90,342,399,261,171,208,	0,491,660,1352,9569,10046,10357,
#Deleted in new
chr6_GL000251v2_alt	4715156	4725532	chr6_GL000251v2_alt:4715156-4725532	0	-	4715156	4715156	8553170	4	1725,261,171,45,	0,9543,10020,10331,
#Deleted in new
chr6_GL000251v2_alt	4715268	4725653	chr6_GL000251v2_alt:4715268-4725653	1	-	4715268	4725524	789624	8	12,35,90,342,399,261,171,166,	0,180,353,522,1214,9431,9908,10219,
#Deleted in new
chr6_GL000251v2_alt	4715761	4725524	chr6_GL000251v2_alt:4715761-4725524	0	-	4715761	4715761	8553170	5	371,399,261,171,37,	0,721,8938,9415,9726,
#Deleted in new
chr6_GL000251v2_alt	4716482	4725529	chr6_GL000251v2_alt:4716482-4725529	0	-	4716482	4725524	789624	3	399,171,42,	0,8694,9005,
#Deleted in new
chr6_GL000251v2_alt	4724496	4725438	chr6_GL000251v2_alt:4724496-4725438	0	-	4724496	4724496	8553170	2	464,262,	0,680,
#Deleted in new
chr6_GL000251v2_alt	4725900	4729221	chr6_GL000251v2_alt:4725900-4729221	3	-	4726494	4728399	789624	2	2568,83,	0,3238,
#Deleted in new
chr6_GL000251v2_alt	4727951	4729427	chr6_GL000251v2_alt:4727951-4729427	0	-	4727951	4728399	789624	2	517,64,	0,1412,
#Deleted in new
chr6_GL000251v2_alt	4730042	4734503	chr6_GL000251v2_alt:4730042-4734503	1	-	4730229	4733412	0	8	247,223,475,214,212,832,259,153,	0,441,824,1455,1824,2180,3163,4308,
#Deleted in new
chr6_GL000251v2_alt	4730042	4734499	chr6_GL000251v2_alt:4730042-4734499	1	-	4730229	4733412	0	8	247,223,475,214,212,832,256,149,	0,441,824,1455,1824,2180,3163,4308,
#Deleted in new
chr6_GL000251v2_alt	4730043	4734505	chr6_GL000251v2_alt:4730043-4734505	1	-	4730229	4733036	0	7	246,223,475,214,212,832,155,	0,440,823,1454,1823,2179,4307,
#Deleted in new
chr6_GL000251v2_alt	4730043	4734505	chr6_GL000251v2_alt:4730043-4734505	3	-	4730233	4733412	0	9	246,53,18,475,214,212,832,259,155,	0,440,645,823,1454,1823,2179,3162,4307,
#Deleted in new
chr6_GL000251v2_alt	4731019	4734419	chr6_GL000251v2_alt:4731019-4734419	0	-	4731019	4731019	8553170	4	322,214,212,69,	0,478,847,3331,
#Deleted in new
chr6_GL000251v2_alt	4731071	4733356	chr6_GL000251v2_alt:4731071-4733356	0	-	4731071	4731071	8553170	4	270,214,212,151,	0,426,795,2134,
#Deleted in new
chr6_GL000251v2_alt	4731150	4731947	chr6_GL000251v2_alt:4731150-4731947	0	-	4731150	4731150	8553170	2	191,450,	0,347,
#Deleted in new
chr6_GL000251v2_alt	4732355	4734407	chr6_GL000251v2_alt:4732355-4734407	0	-	4732355	4732355	8553170	2	699,57,	0,1995,
#Deleted in new
chr6_GL000251v2_alt	4732726	4734434	chr6_GL000251v2_alt:4732726-4734434	0	-	4732726	4733412	789624	3	328,290,84,	0,479,1624,
#Deleted in new
chr6_GL000251v2_alt	4732872	4740721	chr6_GL000251v2_alt:4732872-4740721	0	-	4732872	4733412	789624	4	182,259,60,250,	0,333,2587,7599,
#Deleted in new
chr6_GL000251v2_alt	4733097	4734446	chr6_GL000251v2_alt:4733097-4734446	0	-	4733097	4733097	8553170	2	367,96,	0,1253,
#Deleted in new
chr6_GL000251v2_alt	4733268	4734292	chr6_GL000251v2_alt:4733268-4734292	0	-	4733268	4733412	789624	2	196,175,	0,849,
#Deleted in new
chr6_GL000251v2_alt	4735116	4740754	chr6_GL000251v2_alt:4735116-4740754	0	-	4735116	4735116	8553170	3	237,60,283,	0,343,5355,
#Deleted in new
chr6_GL000251v2_alt	4750464	4750982	chr6_GL000251v2_alt:4750464-4750982	7	+	4750464	4750464	16724991	1	518,	0,
#Deleted in new
chr6_GL000251v2_alt	4777032	4777728	chr6_GL000251v2_alt:4777032-4777728	7	-	4777032	4777032	16724991	1	696,	0,
#Deleted in new
chr6_GL000252v2_alt	49225	49597	chr6_GL000252v2_alt:49225-49597	7	-	49225	49225	16724991	1	372,	0,
#Deleted in new
chr6_GL000252v2_alt	103470	104608	chr6_GL000252v2_alt:103470-104608	3	-	103470	103470	8553170	2	452,257,	0,881,
#Deleted in new
chr6_GL000252v2_alt	125226	128952	chr6_GL000252v2_alt:125226-128952	3	-	125226	125226	8553170	2	2391,67,	0,3659,
#Deleted in new
chr6_GL000252v2_alt	127017	127649	chr6_GL000252v2_alt:127017-127649	7	+	127017	127017	16724991	1	632,	0,
#Deleted in new
chr6_GL000252v2_alt	243077	243376	chr6_GL000252v2_alt:243077-243376	3	+	243077	243077	8553170	1	299,	0,
#Deleted in new
chr6_GL000252v2_alt	251805	253087	chr6_GL000252v2_alt:251805-253087	3	+	251805	251805	8553170	3	30,194,808,	0,110,474,
#Deleted in new
chr6_GL000252v2_alt	252402	254139	chr6_GL000252v2_alt:252402-254139	3	+	252402	252402	8553170	2	80,237,	0,1500,
#Deleted in new
chr6_GL000252v2_alt	260387	270863	chr6_GL000252v2_alt:260387-270863	3	-	260603	269557	789624	7	1802,105,127,92,82,269,253,	0,3949,4702,5171,8728,9161,10223,
#Deleted in new
chr6_GL000252v2_alt	260387	270919	chr6_GL000252v2_alt:260387-270919	0	-	260387	260387	8553170	6	1802,105,561,82,168,309,	0,3949,4702,8728,9113,10223,
#Deleted in new
chr6_GL000252v2_alt	292282	293210	chr6_GL000252v2_alt:292282-293210	7	-	292282	292282	16724991	1	928,	0,
#Deleted in new
chr6_GL000252v2_alt	309815	310843	chr6_GL000252v2_alt:309815-310843	3	-	309815	310778	789624	1	1028,	0,
#Deleted in new
chr6_GL000252v2_alt	329598	342125	chr6_GL000252v2_alt:329598-342125	3	+	329598	342125	789624	3	133,52,229,	0,1124,12298,
#Deleted in new
chr6_GL000252v2_alt	337424	338200	chr6_GL000252v2_alt:337424-338200	7	-	337424	337424	16724991	1	776,	0,
#Deleted in new
chr6_GL000252v2_alt	342173	342769	chr6_GL000252v2_alt:342173-342769	7	-	342173	342173	16724991	1	596,	0,
#Deleted in new
chr6_GL000252v2_alt	351907	352914	chr6_GL000252v2_alt:351907-352914	3	-	351907	352849	789624	1	1007,	0,
#Deleted in new
chr6_GL000252v2_alt	366550	367489	chr6_GL000252v2_alt:366550-367489	7	+	366550	366550	16724991	1	939,	0,
#Deleted in new
chr6_GL000252v2_alt	377492	378428	chr6_GL000252v2_alt:377492-378428	3	+	377492	378428	789624	1	936,	0,
#Deleted in new
chr6_GL000252v2_alt	389810	394509	chr6_GL000252v2_alt:389810-394509	3	+	389810	389810	8553170	2	137,252,	0,4447,
#Deleted in new
chr6_GL000252v2_alt	403477	404414	chr6_GL000252v2_alt:403477-404414	7	-	403477	403477	16724991	1	937,	0,
#Deleted in new
chr6_GL000252v2_alt	438909	440181	chr6_GL000252v2_alt:438909-440181	3	+	439242	440181	789624	1	1272,	0,
#Deleted in new
chr6_GL000252v2_alt	447124	448060	chr6_GL000252v2_alt:447124-448060	7	+	447124	447124	16724991	1	936,	0,
#Deleted in new
chr6_GL000252v2_alt	480873	481817	chr6_GL000252v2_alt:480873-481817	7	+	480873	480873	16724991	1	944,	0,
#Deleted in new
chr6_GL000252v2_alt	489610	532697	chr6_GL000252v2_alt:489610-532697	3	+	489610	489610	789624	3	79,230,155,	0,39833,42932,
#Deleted in new
chr6_GL000252v2_alt	494864	495795	chr6_GL000252v2_alt:494864-495795	7	-	494864	494864	16724991	1	931,	0,
#Deleted in new
chr6_GL000252v2_alt	528314	529691	chr6_GL000252v2_alt:528314-529691	7	-	528314	528314	16724991	2	291,588,	0,789,
#Deleted in new
chr6_GL000252v2_alt	534073	535033	chr6_GL000252v2_alt:534073-535033	7	-	534073	534073	16724991	1	960,	0,
#Deleted in new
chr6_GL000252v2_alt	556339	557282	chr6_GL000252v2_alt:556339-557282	7	+	556339	556339	16724991	1	943,	0,
#Deleted in new
chr6_GL000252v2_alt	572332	573298	chr6_GL000252v2_alt:572332-573298	3	+	572332	573298	789624	1	966,	0,
#Deleted in new
chr6_GL000252v2_alt	595269	596705	chr6_GL000252v2_alt:595269-596705	7	-	595269	595269	16724991	1	1436,	0,
#Deleted in new
chr6_GL000252v2_alt	639070	715620	chr6_GL000252v2_alt:639070-715620	3	-	639984	640935	789624	2	1869,142,	0,76408,
#Deleted in new
chr6_GL000252v2_alt	639070	640939	chr6_GL000252v2_alt:639070-640939	1	-	639984	640935	789624	1	1869,	0,
#Deleted in new
chr6_GL000252v2_alt	662063	663132	chr6_GL000252v2_alt:662063-663132	3	+	662208	663132	789624	1	1069,	0,
#Deleted in new
chr6_GL000252v2_alt	682793	683756	chr6_GL000252v2_alt:682793-683756	7	+	682793	682793	16724991	1	963,	0,
#Deleted in new
chr6_GL000252v2_alt	688136	697489	chr6_GL000252v2_alt:688136-697489	3	-	688136	688136	8553170	3	76,38,104,	0,418,9249,
#Deleted in new
chr6_GL000252v2_alt	691031	693994	chr6_GL000252v2_alt:691031-693994	1	-	692221	693169	789624	2	2229,253,	0,2710,
#Deleted in new
chr6_GL000252v2_alt	691031	722594	chr6_GL000252v2_alt:691031-722594	3	-	692221	693169	789624	5	2229,48,125,124,85,	0,3403,4791,6354,31478,
#Deleted in new
chr6_GL000252v2_alt	691031	693260	chr6_GL000252v2_alt:691031-693260	1	-	692221	693169	789624	1	2229,	0,
#Deleted in new
chr6_GL000252v2_alt	704827	706476	chr6_GL000252v2_alt:704827-706476	3	+	705537	706476	789624	1	1649,	0,
#Deleted in new
chr6_GL000252v2_alt	705460	706499	chr6_GL000252v2_alt:705460-706499	1	+	705531	706476	789624	1	1039,	0,
#Deleted in new
chr6_GL000252v2_alt	722703	729851	chr6_GL000252v2_alt:722703-729851	3	+	727292	728243	789624	4	27,116,51,2830,	0,1273,3223,4318,
#Deleted in new
chr6_GL000252v2_alt	722710	729851	chr6_GL000252v2_alt:722710-729851	1	+	727292	728243	789624	4	20,116,51,2834,	0,1266,3216,4307,
#Deleted in new
chr6_GL000252v2_alt	722725	726609	chr6_GL000252v2_alt:722725-726609	0	+	722725	722725	8553170	4	5,116,164,211,	0,1251,2818,3673,
#Deleted in new
chr6_GL000252v2_alt	725293	729851	chr6_GL000252v2_alt:725293-729851	1	+	727292	728243	789624	3	414,1259,580,	0,1704,3978,
#Deleted in new
chr6_GL000252v2_alt	726962	728256	chr6_GL000252v2_alt:726962-728256	1	+	727292	728243	789624	1	1294,	0,
#Deleted in new
chr6_GL000252v2_alt	727017	728243	chr6_GL000252v2_alt:727017-728243	0	+	727017	727017	8553170	2	256,717,	0,509,
#Deleted in new
chr6_GL000252v2_alt	727017	728243	chr6_GL000252v2_alt:727017-728243	0	+	727017	727017	8553170	2	256,730,	0,496,
#Deleted in new
chr6_GL000252v2_alt	730118	735329	chr6_GL000252v2_alt:730118-735329	7	-	730118	730118	16724991	2	359,22,	0,5189,
#Deleted in new
chr6_GL000252v2_alt	740547	741594	chr6_GL000252v2_alt:740547-741594	7	-	740547	740547	16724991	1	1047,	0,
#Deleted in new
chr6_GL000252v2_alt	752288	753425	chr6_GL000252v2_alt:752288-753425	3	-	752288	753425	789624	1	1137,	0,
#Deleted in new
chr6_GL000252v2_alt	754793	755199	chr6_GL000252v2_alt:754793-755199	7	-	754793	754793	16724991	1	406,	0,
#Deleted in new
chr6_GL000252v2_alt	763031	776079	chr6_GL000252v2_alt:763031-776079	3	+	763031	763031	8553170	4	31,57,500,289,	0,7812,9660,12759,
#Deleted in new
chr6_GL000252v2_alt	794946	799095	chr6_GL000252v2_alt:794946-799095	3	+	794946	794946	789624	3	165,95,2517,	0,529,1632,
#Deleted in new
chr6_GL000252v2_alt	795002	797684	chr6_GL000252v2_alt:795002-797684	0	+	795002	795002	8553170	4	109,95,117,78,	0,473,1576,2604,
#Deleted in new
chr6_GL000252v2_alt	803230	804314	chr6_GL000252v2_alt:803230-804314	7	-	803230	803230	16724991	1	1084,	0,
#Deleted in new
chr6_GL000252v2_alt	818761	819709	chr6_GL000252v2_alt:818761-819709	7	+	818761	818761	16724991	1	948,	0,
#Deleted in new
chr6_GL000252v2_alt	821154	893588	chr6_GL000252v2_alt:821154-893588	1	-	869091	893341	0	19	739,176,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,553,	0,47935,48888,49254,49963,50785,51291,51496,52995,53623,55318,56945,57637,65496,66147,66499,67700,68285,71881,
#Deleted in new
chr6_GL000252v2_alt	821154	825468	chr6_GL000252v2_alt:821154-825468	3	-	821422	825244	0	2	739,251,	0,4063,
#Deleted in new
chr6_GL000252v2_alt	839457	840385	chr6_GL000252v2_alt:839457-840385	7	+	839457	839457	16724991	1	928,	0,
#Deleted in new
chr6_GL000252v2_alt	843007	843297	chr6_GL000252v2_alt:843007-843297	7	+	843007	843007	16724991	1	290,	0,
#Deleted in new
chr6_GL000252v2_alt	847797	847881	chr6_GL000252v2_alt:847797-847881	3	+	847797	847797	789624	1	84,	0,
#Deleted in new
chr6_GL000252v2_alt	848056	848574	chr6_GL000252v2_alt:848056-848574	7	+	848056	848056	16724991	1	518,	0,
#Deleted in new
chr6_GL000252v2_alt	853003	854587	chr6_GL000252v2_alt:853003-854587	3	+	853493	854432	789624	1	1584,	0,
#Deleted in new
chr6_GL000252v2_alt	867778	898710	chr6_GL000252v2_alt:867778-898710	1	-	869091	897935	0	23	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,186,204,85,311,	0,2264,2630,3339,4161,4667,4872,6371,6999,8694,10321,11013,18872,19523,19875,21076,21661,25257,26858,28229,29167,30072,30621,
#Deleted in new
chr6_GL000252v2_alt	867778	898685	chr6_GL000252v2_alt:867778-898685	1	-	869091	897935	0	22	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,204,85,286,	0,2264,2630,3339,4161,4667,4872,6371,6999,8694,10321,11013,18872,19523,19875,21076,21661,25257,26858,29167,30072,30621,
#Deleted in new
chr6_GL000252v2_alt	867778	893563	chr6_GL000252v2_alt:867778-893563	1	-	869091	893341	0	18	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,528,	0,2264,2630,3339,4161,4667,4872,6371,6999,8694,10321,11013,18872,19523,19875,21076,21661,25257,
#Deleted in new
chr6_GL000252v2_alt	867778	898484	chr6_GL000252v2_alt:867778-898484	0	-	867778	867778	8553170	23	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,122,204,85,85,	0,2264,2630,3339,4161,4667,4872,6371,6999,8694,10321,11013,18872,19523,19875,21076,21661,25257,26858,28293,29167,30072,30621,
#Deleted in new
chr6_GL000252v2_alt	867778	874282	chr6_GL000252v2_alt:867778-874282	0	-	867778	867778	8553170	5	1350,94,108,117,133,	0,4161,4667,4872,6371,
#Deleted in new
chr6_GL000252v2_alt	868862	870698	chr6_GL000252v2_alt:868862-870698	0	-	868862	868862	8553170	3	403,144,290,	0,1180,1546,
#Deleted in new
chr6_GL000252v2_alt	870461	897935	chr6_GL000252v2_alt:870461-897935	0	-	870461	870461	8553170	19	76,128,94,108,117,133,78,64,243,192,66,102,171,135,161,21,186,204,85,	0,656,1478,1984,2189,3688,6011,7638,8330,16189,16840,17192,18393,18978,22574,24175,25546,26484,27389,
#Deleted in new
chr6_GL000252v2_alt	870958	872138	chr6_GL000252v2_alt:870958-872138	0	-	870958	870958	8553170	2	287,199,	0,981,
#Deleted in new
chr6_GL000252v2_alt	874002	878148	chr6_GL000252v2_alt:874002-878148	0	-	874002	874002	8553170	3	280,78,49,	0,2470,4097,
#Deleted in new
chr6_GL000252v2_alt	874253	897937	chr6_GL000252v2_alt:874253-897937	1	-	874253	897935	0	14	29,78,64,243,192,66,102,171,135,161,21,186,204,87,	0,2219,3846,4538,12397,13048,13400,14601,15186,18782,20383,21754,22692,23597,
#Deleted in new
chr6_GL000252v2_alt	887353	889811	chr6_GL000252v2_alt:887353-889811	0	-	887353	887353	8553170	4	14,102,171,372,	0,300,1501,2086,
#Deleted in new
chr6_GL000252v2_alt	895448	898617	chr6_GL000252v2_alt:895448-898617	2	-	895448	895448	8553170	4	745,204,85,218,	0,1497,2402,2951,
#Deleted in new
chr6_GL000252v2_alt	901606	901890	chr6_GL000252v2_alt:901606-901890	7	-	901606	901606	16724991	1	284,	0,
#Deleted in new
chr6_GL000252v2_alt	922525	937916	chr6_GL000252v2_alt:922525-937916	3	+	922754	936727	0	7	317,348,114,21,21,21,1203,	0,2337,9167,10659,10920,13717,14188,
#Deleted in new
chr6_GL000252v2_alt	922543	937918	chr6_GL000252v2_alt:922543-937918	1	+	922754	936727	0	8	299,348,114,21,21,117,21,1205,	0,2319,9149,10641,10902,13279,13699,14170,
#Deleted in new
chr6_GL000252v2_alt	922592	931801	chr6_GL000252v2_alt:922592-931801	0	+	922592	922592	8553170	3	250,343,109,	0,2275,9100,
#Deleted in new
chr6_GL000252v2_alt	922636	937918	chr6_GL000252v2_alt:922636-937918	1	+	922754	936421	0	7	206,348,114,21,21,117,1676,	0,2226,9056,10548,10809,13186,13606,
#Deleted in new
chr6_GL000252v2_alt	922674	925468	chr6_GL000252v2_alt:922674-925468	0	+	922674	922674	8553170	2	168,606,	0,2188,
#Deleted in new
chr6_GL000252v2_alt	922754	937918	chr6_GL000252v2_alt:922754-937918	1	+	922754	936727	0	8	88,348,114,21,21,48,21,1205,	0,2108,8938,10430,10691,12961,13488,13959,
#Deleted in new
chr6_GL000252v2_alt	922754	937918	chr6_GL000252v2_alt:922754-937918	1	+	922754	936992	789624	8	88,348,114,21,21,117,21,955,	0,2108,8938,10430,10691,13068,13488,14209,
#Deleted in new
chr6_GL000252v2_alt	922754	937918	chr6_GL000252v2_alt:922754-937918	1	+	922754	936992	0	8	88,348,114,21,21,48,21,955,	0,2108,8938,10430,10691,12961,13488,14209,
#Deleted in new
chr6_GL000252v2_alt	922754	937918	chr6_GL000252v2_alt:922754-937918	1	+	922754	936992	0	7	88,348,114,21,21,21,955,	0,2108,8938,10430,10691,13488,14209,
#Deleted in new
chr6_GL000252v2_alt	922754	937918	chr6_GL000252v2_alt:922754-937918	1	+	922754	936727	0	7	88,114,21,21,117,21,1205,	0,8938,10430,10691,13068,13488,13959,
#Deleted in new
chr6_GL000252v2_alt	922760	937918	chr6_GL000252v2_alt:922760-937918	0	+	922760	936992	0	6	82,348,114,21,21,955,	0,2102,8932,10424,10685,14203,
#Deleted in new
chr6_GL000252v2_alt	924862	937918	chr6_GL000252v2_alt:924862-937918	0	+	924862	936727	789624	6	348,114,21,21,21,1205,	0,6830,8322,8583,11380,11851,
#Deleted in new
chr6_GL000252v2_alt	924862	937918	chr6_GL000252v2_alt:924862-937918	0	+	924862	924862	8553170	8	348,138,114,21,21,117,21,955,	0,5308,6830,8322,8583,10960,11380,12101,
#Deleted in new
chr6_GL000252v2_alt	924862	937918	chr6_GL000252v2_alt:924862-937918	0	+	924862	924862	8553170	8	348,138,114,21,21,117,21,1205,	0,5308,6830,8322,8583,10960,11380,11851,
#Deleted in new
chr6_GL000252v2_alt	937937	942702	chr6_GL000252v2_alt:937937-942702	1	-	938045	942551	789624	4	1367,102,127,274,	0,2995,3542,4491,
#Deleted in new
chr6_GL000252v2_alt	938028	946648	chr6_GL000252v2_alt:938028-946648	3	-	938045	942551	789624	6	1276,102,127,33,393,49,	0,2904,3451,4400,4493,8571,
#Deleted in new
chr6_GL000252v2_alt	938045	942850	chr6_GL000252v2_alt:938045-942850	1	-	938045	942850	789624	4	1126,67,145,21,	0,2922,3434,4784,
#Deleted in new
chr6_GL000252v2_alt	973654	974077	chr6_GL000252v2_alt:973654-974077	7	-	973654	973654	16724991	1	423,	0,
#Deleted in new
chr6_GL000252v2_alt	985848	989600	chr6_GL000252v2_alt:985848-989600	1	+	986537	989481	789624	8	226,222,270,276,276,117,33,124,	0,531,883,1398,2256,2672,3236,3628,
#Deleted in new
chr6_GL000252v2_alt	986054	987045	chr6_GL000252v2_alt:986054-987045	7	-	986054	986054	16724991	1	991,	0,
#Deleted in new
chr6_GL000252v2_alt	986352	987305	chr6_GL000252v2_alt:986352-987305	0	+	986537	987305	789624	3	249,270,59,	0,379,894,
#Deleted in new
chr6_GL000252v2_alt	986413	989599	chr6_GL000252v2_alt:986413-989599	1	+	986537	989481	789624	7	188,270,276,276,117,33,123,	0,318,833,1691,2107,2671,3063,
#Deleted in new
chr6_GL000252v2_alt	986465	987489	chr6_GL000252v2_alt:986465-987489	0	+	986465	986465	8553170	2	536,243,	0,781,
#Deleted in new
chr6_GL000252v2_alt	986481	990372	chr6_GL000252v2_alt:986481-990372	3	+	986537	990251	789624	7	120,270,276,276,117,33,414,	0,250,765,1623,2039,2603,3477,
#Deleted in new
chr6_GL000252v2_alt	986500	989600	chr6_GL000252v2_alt:986500-989600	0	+	986500	986500	8553170	5	28,187,117,33,124,	0,1693,2020,2584,2976,
#Deleted in new
chr6_GL000252v2_alt	986507	988161	chr6_GL000252v2_alt:986507-988161	0	+	986507	986507	8553170	4	94,158,276,57,	0,336,739,1597,
#Deleted in new
chr6_GL000252v2_alt	986537	989600	chr6_GL000252v2_alt:986537-989600	1	+	986537	989481	0	6	64,270,276,117,33,124,	0,194,709,1983,2547,2939,
#Deleted in new
chr6_GL000252v2_alt	986577	987426	chr6_GL000252v2_alt:986577-987426	0	+	986577	986577	8553170	2	424,163,	0,686,
#Deleted in new
chr6_GL000252v2_alt	987013	988373	chr6_GL000252v2_alt:987013-988373	0	+	987013	987013	8553170	2	509,269,	0,1091,
#Deleted in new
chr6_GL000252v2_alt	987112	989600	chr6_GL000252v2_alt:987112-989600	0	+	987112	989481	789624	6	44,202,276,117,33,124,	0,208,992,1408,1972,2364,
#Deleted in new
chr6_GL000252v2_alt	987230	989600	chr6_GL000252v2_alt:987230-989600	0	+	987230	987230	8553170	4	292,276,117,516,	0,874,1290,1854,
#Deleted in new
chr6_GL000252v2_alt	988127	1001601	chr6_GL000252v2_alt:988127-1001601	0	+	988127	988127	8553170	5	253,117,33,67,153,	0,393,957,13067,13321,
#Deleted in new
chr6_GL000252v2_alt	988527	992427	chr6_GL000252v2_alt:988527-992427	0	+	988527	988527	8553170	2	110,1395,	0,2505,
#Deleted in new
chr6_GL000252v2_alt	988607	990372	chr6_GL000252v2_alt:988607-990372	0	+	988607	990251	789624	3	30,51,414,	0,459,1351,
#Deleted in new
chr6_GL000252v2_alt	989676	1012119	chr6_GL000252v2_alt:989676-1012119	0	-	989676	989676	789624	6	539,131,471,336,278,150,	0,1764,11362,11947,20547,22293,
#Deleted in new
chr6_GL000252v2_alt	989744	990215	chr6_GL000252v2_alt:989744-990215	7	-	989744	989744	16724991	1	471,	0,
#Deleted in new
chr6_GL000252v2_alt	998108	1012063	chr6_GL000252v2_alt:998108-1012063	3	-	998108	998108	8553170	6	1788,236,121,336,255,94,	0,2930,3299,3515,10436,13861,
#Deleted in new
chr6_GL000252v2_alt	1000831	1001517	chr6_GL000252v2_alt:1000831-1001517	0	-	1000831	1000831	8553170	2	443,110,	0,576,
#Deleted in new
chr6_GL000252v2_alt	1004802	1012039	chr6_GL000252v2_alt:1004802-1012039	7	-	1004802	1004802	16724991	6	125,144,278,285,255,70,	0,2278,2536,3219,3742,7167,
#Deleted in new
chr6_GL000252v2_alt	1011358	1011583	chr6_GL000252v2_alt:1011358-1011583	7	+	1011358	1011358	16724991	1	225,	0,
#Deleted in new
chr6_GL000252v2_alt	1013439	1013541	chr6_GL000252v2_alt:1013439-1013541	3	+	1013439	1013439	8553170	1	102,	0,
#Deleted in new
chr6_GL000252v2_alt	1013795	1014216	chr6_GL000252v2_alt:1013795-1014216	7	-	1013795	1013795	16724991	1	421,	0,
#Deleted in new
chr6_GL000252v2_alt	1053844	1055755	chr6_GL000252v2_alt:1053844-1055755	5	+	1053844	1053844	16724991	4	14,68,254,334,	0,847,1192,1577,
#Deleted in new
chr6_GL000252v2_alt	1053938	1056086	chr6_GL000252v2_alt:1053938-1056086	4	+	1053938	1053938	16724991	4	33,68,81,665,	0,753,1271,1483,
#Deleted in new
chr6_GL000252v2_alt	1054336	1060626	chr6_GL000252v2_alt:1054336-1060626	7	+	1054336	1054336	16724991	7	47,68,196,450,191,2022,460,	0,355,758,1085,1999,2361,5830,
#Deleted in new
chr6_GL000252v2_alt	1054737	1055735	chr6_GL000252v2_alt:1054737-1055735	7	-	1054737	1054737	16724991	1	998,	0,
#Deleted in new
chr6_GL000252v2_alt	1054890	1060626	chr6_GL000252v2_alt:1054890-1060626	5	+	1054890	1054890	16724991	3	400,270,619,	0,531,5117,
#Deleted in new
chr6_GL000252v2_alt	1055207	1060626	chr6_GL000252v2_alt:1055207-1060626	5	+	1055207	1055207	16724991	3	83,270,4291,	0,214,1128,
#Deleted in new
chr6_GL000252v2_alt	1055218	1056121	chr6_GL000252v2_alt:1055218-1056121	5	+	1055218	1055218	16724991	3	72,270,192,	0,203,711,
#Deleted in new
chr6_GL000252v2_alt	1063229	1065238	chr6_GL000252v2_alt:1063229-1065238	7	+	1063229	1063229	16724991	5	258,276,117,37,46,	0,847,1247,1776,1963,
#Deleted in new
chr6_GL000252v2_alt	1066009	1066806	chr6_GL000252v2_alt:1066009-1066806	7	-	1066009	1066009	16724991	1	797,	0,
#Deleted in new
chr6_GL000252v2_alt	1075381	1075513	chr6_GL000252v2_alt:1075381-1075513	7	-	1075381	1075381	16724991	1	132,	0,
#Deleted in new
chr6_GL000252v2_alt	1089779	1093938	chr6_GL000252v2_alt:1089779-1093938	3	+	1089851	1093195	789624	8	78,82,270,276,276,117,33,358,	0,869,1080,1576,2451,2849,3411,3801,
#Deleted in new
chr6_GL000252v2_alt	1089791	1093935	chr6_GL000252v2_alt:1089791-1093935	1	+	1090657	1093195	0	8	66,185,270,276,276,117,33,355,	0,754,1068,1564,2439,2837,3399,3789,
#Deleted in new
chr6_GL000252v2_alt	1090197	1091177	chr6_GL000252v2_alt:1090197-1091177	7	-	1090197	1090197	16724991	1	980,	0,
#Deleted in new
chr6_GL000252v2_alt	1090633	1093938	chr6_GL000252v2_alt:1090633-1093938	1	+	1090657	1093195	0	7	97,270,276,276,117,33,358,	0,226,722,1597,1995,2557,2947,
#Deleted in new
chr6_GL000252v2_alt	1090657	1093938	chr6_GL000252v2_alt:1090657-1093938	1	+	1090657	1093195	789624	6	73,270,276,117,33,358,	0,202,1573,1971,2533,2923,
#Deleted in new
chr6_GL000252v2_alt	1090657	1093938	chr6_GL000252v2_alt:1090657-1093938	1	+	1090657	1093195	0	5	73,270,117,33,358,	0,202,1971,2533,2923,
#Deleted in new
chr6_GL000252v2_alt	1090657	1093938	chr6_GL000252v2_alt:1090657-1093938	0	+	1090657	1093195	789624	7	73,270,276,117,33,48,358,	0,202,1573,1971,2533,2708,2923,
#Deleted in new
chr6_GL000252v2_alt	1090657	1093938	chr6_GL000252v2_alt:1090657-1093938	0	+	1090657	1090657	8553170	6	73,270,276,515,33,358,	0,202,698,1573,2533,2923,
#Deleted in new
chr6_GL000252v2_alt	1115158	1115287	chr6_GL000252v2_alt:1115158-1115287	7	-	1115158	1115158	16724991	1	129,	0,
#Deleted in new
chr6_GL000252v2_alt	1144501	1145470	chr6_GL000252v2_alt:1144501-1145470	7	-	1144501	1144501	16724991	1	969,	0,
#Deleted in new
chr6_GL000252v2_alt	1144954	1265390	chr6_GL000252v2_alt:1144954-1265390	3	+	1144959	1200631	789624	11	78,20,20,230,276,276,117,33,38,43,176,	0,202,38879,53395,53866,54742,55117,55672,69366,120166,120260,
#Deleted in new
chr6_GL000252v2_alt	1144959	1147682	chr6_GL000252v2_alt:1144959-1147682	7	+	1144959	1144959	16724991	7	73,270,276,275,117,33,44,	0,197,709,1570,1947,2504,2679,
#Deleted in new
chr6_GL000252v2_alt	1153765	1154897	chr6_GL000252v2_alt:1153765-1154897	7	+	1153765	1153765	16724991	4	272,102,37,39,	0,397,908,1093,
#Deleted in new
chr6_GL000252v2_alt	1163736	1164103	chr6_GL000252v2_alt:1163736-1164103	7	+	1163736	1163736	16724991	2	135,57,	0,310,
#Deleted in new
chr6_GL000252v2_alt	1164975	1165838	chr6_GL000252v2_alt:1164975-1165838	7	-	1164975	1164975	16724991	2	161,167,	0,696,
#Deleted in new
chr6_GL000252v2_alt	1183136	1184127	chr6_GL000252v2_alt:1183136-1184127	7	-	1183136	1183136	16724991	1	991,	0,
#Deleted in new
chr6_GL000252v2_alt	1183612	1186388	chr6_GL000252v2_alt:1183612-1186388	7	+	1183612	1183612	16724991	6	72,261,275,263,117,47,	0,201,719,1606,1998,2729,
#Deleted in new
chr6_GL000252v2_alt	1183614	1200853	chr6_GL000252v2_alt:1183614-1200853	1	+	1183614	1200845	789624	7	70,270,276,276,121,29,52,	0,14695,15206,16082,16457,17016,17187,
#Deleted in new
chr6_GL000252v2_alt	1189497	1189683	chr6_GL000252v2_alt:1189497-1189683	7	+	1189497	1189497	16724991	1	186,	0,
#Deleted in new
chr6_GL000252v2_alt	1196811	1201452	chr6_GL000252v2_alt:1196811-1201452	1	+	1198106	1201023	0	10	60,131,223,270,276,276,117,33,48,434,	0,707,1145,1498,2009,2885,3260,3815,3990,4207,
#Deleted in new
chr6_GL000252v2_alt	1197627	1198620	chr6_GL000252v2_alt:1197627-1198620	7	-	1197627	1197627	16724991	1	993,	0,
#Deleted in new
chr6_GL000252v2_alt	1197797	1201452	chr6_GL000252v2_alt:1197797-1201452	1	+	1198106	1201023	789624	8	382,270,276,276,135,33,48,434,	0,512,1023,1899,2274,2829,3004,3221,
#Deleted in new
chr6_GL000252v2_alt	1198022	1201452	chr6_GL000252v2_alt:1198022-1201452	1	+	1198106	1201023	0	8	157,270,276,276,117,33,48,434,	0,287,798,1674,2049,2604,2779,2996,
#Deleted in new
chr6_GL000252v2_alt	1198100	1201452	chr6_GL000252v2_alt:1198100-1201452	0	+	1198100	1198100	8553170	7	79,98,259,276,588,48,434,	0,209,737,1596,1971,2701,2918,
#Deleted in new
chr6_GL000252v2_alt	1198101	1201452	chr6_GL000252v2_alt:1198101-1201452	1	+	1198106	1201023	789624	5	78,270,276,276,434,	0,208,719,1595,2917,
#Deleted in new
chr6_GL000252v2_alt	1198104	1201452	chr6_GL000252v2_alt:1198104-1201452	0	+	1198104	1198104	8553170	7	75,787,276,117,29,48,434,	0,205,1592,1967,2526,2697,2914,
#Deleted in new
chr6_GL000252v2_alt	1198106	1200849	chr6_GL000252v2_alt:1198106-1200849	0	+	1198106	1198106	8553170	6	73,787,276,117,33,48,	0,203,1590,1965,2520,2695,
#Deleted in new
chr6_GL000252v2_alt	1198106	1200849	chr6_GL000252v2_alt:1198106-1200849	0	+	1198106	1198106	8553170	6	73,787,276,135,33,48,	0,203,1590,1965,2520,2695,
#Deleted in new
chr6_GL000252v2_alt	1212135	1214110	chr6_GL000252v2_alt:1212135-1214110	7	+	1212135	1212135	16724991	5	261,274,153,37,46,	0,843,1244,1743,1929,
#Deleted in new
chr6_GL000252v2_alt	1226341	1228004	chr6_GL000252v2_alt:1226341-1228004	7	-	1226341	1226341	16724991	3	276,281,256,	0,886,1407,
#Deleted in new
chr6_GL000252v2_alt	1230637	1233937	chr6_GL000252v2_alt:1230637-1233937	3	+	1230637	1230637	789624	3	406,64,193,	0,2543,3107,
#Deleted in new
chr6_GL000252v2_alt	1248746	1249143	chr6_GL000252v2_alt:1248746-1249143	7	+	1248746	1248746	16724991	2	123,135,	0,262,
#Deleted in new
chr6_GL000252v2_alt	1249974	1250852	chr6_GL000252v2_alt:1249974-1250852	7	-	1249974	1249974	16724991	2	165,170,	0,708,
#Deleted in new
chr6_GL000252v2_alt	1256548	1317106	chr6_GL000252v2_alt:1256548-1317106	0	-	1256548	1256548	789624	6	1722,203,68,76,255,106,	0,34245,35253,57488,60114,60452,
#Deleted in new
chr6_GL000252v2_alt	1256548	1317065	chr6_GL000252v2_alt:1256548-1317065	0	-	1256548	1256548	8553170	4	1722,95,76,403,	0,20671,57488,60114,
#Deleted in new
chr6_GL000252v2_alt	1256548	1317066	chr6_GL000252v2_alt:1256548-1317066	0	-	1256548	1256548	8553170	12	1722,202,174,119,43,279,106,95,203,68,76,183,	0,2157,6209,6510,7618,7879,8712,20671,34245,35253,57488,60335,
#Deleted in new
chr6_GL000252v2_alt	1256548	1316850	chr6_GL000252v2_alt:1256548-1316850	2	-	1256548	1256548	8553170	3	1722,76,188,	0,57488,60114,
#Deleted in new
chr6_GL000252v2_alt	1261655	1262651	chr6_GL000252v2_alt:1261655-1262651	7	-	1261655	1261655	16724991	1	996,	0,
#Deleted in new
chr6_GL000252v2_alt	1262117	1265491	chr6_GL000252v2_alt:1262117-1265491	5	+	1262117	1262117	16724991	6	87,270,274,140,48,422,	0,217,1606,2455,2737,2952,
#Deleted in new
chr6_GL000252v2_alt	1262121	1265491	chr6_GL000252v2_alt:1262121-1265491	5	+	1262121	1262121	16724991	6	83,270,274,117,140,422,	0,213,1602,1998,2451,2948,
#Deleted in new
chr6_GL000252v2_alt	1262130	1265491	chr6_GL000252v2_alt:1262130-1265491	7	+	1262130	1262130	16724991	5	74,274,140,48,422,	0,1593,2442,2724,2939,
#Deleted in new
chr6_GL000252v2_alt	1262140	1265074	chr6_GL000252v2_alt:1262140-1265074	5	+	1262140	1262140	16724991	8	64,270,276,274,117,33,48,5,	0,194,712,1583,1979,2539,2714,2929,
#Deleted in new
chr6_GL000252v2_alt	1266363	1267808	chr6_GL000252v2_alt:1266363-1267808	0	-	1266363	1266363	8553170	1	1445,	0,
#Deleted in new
chr6_GL000252v2_alt	1267633	1290901	chr6_GL000252v2_alt:1267633-1290901	1	-	1267633	1267633	8553170	2	9681,108,	0,23160,
#Deleted in new
chr6_GL000252v2_alt	1275322	1317562	chr6_GL000252v2_alt:1275322-1317562	0	-	1275322	1275322	8553170	6	155,95,203,68,76,900,	0,1897,15471,16479,38714,41340,
#Deleted in new
chr6_GL000252v2_alt	1287598	1288889	chr6_GL000252v2_alt:1287598-1288889	7	+	1287598	1287598	16724991	2	436,548,	0,743,
#Deleted in new
chr6_GL000252v2_alt	1290820	1314669	chr6_GL000252v2_alt:1290820-1314669	0	-	1290820	1290820	8553170	4	176,68,76,380,	0,981,23216,23469,
#Deleted in new
chr6_GL000252v2_alt	1291315	1317111	chr6_GL000252v2_alt:1291315-1317111	0	-	1291315	1291315	8553170	4	554,627,76,449,	0,21697,22721,25347,
#Deleted in new
chr6_GL000252v2_alt	1291801	1291869	chr6_GL000252v2_alt:1291801-1291869	3	+	1291801	1291801	8553170	1	68,	0,
#Deleted in new
chr6_GL000252v2_alt	1310522	1317101	chr6_GL000252v2_alt:1310522-1317101	0	-	1310522	1310522	8553170	3	3117,76,101,	0,3514,6478,
#Deleted in new
chr6_GL000252v2_alt	1312674	1316901	chr6_GL000252v2_alt:1312674-1316901	0	-	1312674	1312674	8553170	3	965,76,2612,	0,1362,1615,
#Deleted in new
chr6_GL000252v2_alt	1314036	1314112	chr6_GL000252v2_alt:1314036-1314112	3	+	1314036	1314036	8553170	1	76,	0,
#Deleted in new
chr6_GL000252v2_alt	1314820	1320825	chr6_GL000252v2_alt:1314820-1320825	0	+	1314820	1314820	8553170	2	3435,237,	0,5768,
#Deleted in new
chr6_GL000252v2_alt	1317001	1317105	chr6_GL000252v2_alt:1317001-1317105	3	+	1317001	1317001	8553170	1	104,	0,
#Deleted in new
chr6_GL000252v2_alt	1317175	1320825	chr6_GL000252v2_alt:1317175-1320825	3	+	1317446	1320613	789624	4	416,101,110,237,	0,663,970,3413,
#Deleted in new
chr6_GL000252v2_alt	1317178	1320825	chr6_GL000252v2_alt:1317178-1320825	1	+	1317446	1320613	789624	5	133,155,101,110,237,	0,258,660,967,3410,
#Deleted in new
chr6_GL000252v2_alt	1317180	1320825	chr6_GL000252v2_alt:1317180-1320825	1	+	1317446	1320613	789624	5	140,155,101,110,237,	0,256,658,965,3408,
#Deleted in new
chr6_GL000252v2_alt	1317184	1320825	chr6_GL000252v2_alt:1317184-1320825	1	+	1317446	1320613	789624	5	151,155,101,110,237,	0,252,654,961,3404,
#Deleted in new
chr6_GL000252v2_alt	1317251	1320825	chr6_GL000252v2_alt:1317251-1320825	0	+	1317251	1317251	789624	4	69,155,110,237,	0,185,894,3337,
#Deleted in new
chr6_GL000252v2_alt	1322624	1326249	chr6_GL000252v2_alt:1322624-1326249	3	+	1324592	1325222	789624	3	301,109,1230,	0,1881,2395,
#Deleted in new
chr6_GL000252v2_alt	1323003	1326249	chr6_GL000252v2_alt:1323003-1326249	1	+	1323326	1325222	789624	3	392,109,1230,	0,1502,2016,
#Deleted in new
chr6_GL000252v2_alt	1323120	1326249	chr6_GL000252v2_alt:1323120-1326249	1	+	1324592	1325222	789624	4	275,75,109,1230,	0,1074,1385,1899,
#Deleted in new
chr6_GL000252v2_alt	1323458	1326249	chr6_GL000252v2_alt:1323458-1326249	1	+	1324592	1325222	789624	4	122,75,109,1230,	0,736,1047,1561,
#Deleted in new
chr6_GL000252v2_alt	1323491	1326249	chr6_GL000252v2_alt:1323491-1326249	1	+	1324592	1325222	789624	4	50,75,109,1230,	0,703,1014,1528,
#Deleted in new
chr6_GL000252v2_alt	1324121	1326249	chr6_GL000252v2_alt:1324121-1326249	1	+	1324592	1325222	789624	2	493,1230,	0,898,
#Deleted in new
chr6_GL000252v2_alt	1326181	1331765	chr6_GL000252v2_alt:1326181-1331765	1	-	1327026	1331705	789624	5	935,293,92,23,627,	0,1133,2891,3190,4957,
#Deleted in new
chr6_GL000252v2_alt	1326181	1331803	chr6_GL000252v2_alt:1326181-1331803	3	-	1327026	1331705	789624	4	1426,92,23,665,	0,2891,3190,4957,
#Deleted in new
chr6_GL000252v2_alt	1358813	1369016	chr6_GL000252v2_alt:1358813-1369016	3	-	1359452	1368715	0	9	893,66,75,116,23,231,96,500,43,	0,1205,2271,5157,6124,7545,8744,9485,10160,
#Deleted in new
chr6_GL000252v2_alt	1358813	1368800	chr6_GL000252v2_alt:1358813-1368800	0	-	1358813	1358813	789624	7	893,66,75,72,231,96,502,	0,1205,2271,5157,7545,8744,9485,
#Deleted in new
chr6_GL000252v2_alt	1358813	1361574	chr6_GL000252v2_alt:1358813-1361574	0	-	1358813	1358813	8553170	4	349,318,66,490,	0,575,1205,2271,
#Deleted in new
chr6_GL000252v2_alt	1359278	1366432	chr6_GL000252v2_alt:1359278-1366432	0	-	1359278	1359278	8553170	6	428,66,75,72,23,74,	0,740,1806,4692,5659,7080,
#Deleted in new
chr6_GL000252v2_alt	1359789	1364117	chr6_GL000252v2_alt:1359789-1364117	0	-	1359789	1359789	8553170	3	295,75,147,	0,1295,4181,
#Deleted in new
chr6_GL000252v2_alt	1359847	1361357	chr6_GL000252v2_alt:1359847-1361357	0	-	1359847	1359847	8553170	2	237,273,	0,1237,
#Deleted in new
chr6_GL000252v2_alt	1361112	1368096	chr6_GL000252v2_alt:1361112-1368096	0	-	1361112	1361112	8553170	6	47,116,23,231,96,107,	0,2858,3825,5246,6445,6877,
#Deleted in new
chr6_GL000252v2_alt	1361156	1370634	chr6_GL000252v2_alt:1361156-1370634	3	+	1361156	1361156	789624	4	148,125,122,154,	0,2424,6471,9324,
#Deleted in new
chr6_GL000252v2_alt	1364657	1367616	chr6_GL000252v2_alt:1364657-1367616	0	-	1364657	1364657	8553170	3	303,231,59,	0,1701,2900,
#Deleted in new
chr6_GL000252v2_alt	1367127	1368385	chr6_GL000252v2_alt:1367127-1368385	0	-	1367127	1367127	8553170	2	526,87,	0,1171,
#Deleted in new
chr6_GL000252v2_alt	1388717	1388879	chr6_GL000252v2_alt:1388717-1388879	3	-	1388717	1388717	8553170	1	162,	0,
#Deleted in new
chr6_GL000252v2_alt	1392025	1404652	chr6_GL000252v2_alt:1392025-1404652	3	+	1392954	1403729	789624	6	82,649,96,225,23,1011,	0,625,9885,10876,11411,11616,
#Deleted in new
chr6_GL000252v2_alt	1392041	1393116	chr6_GL000252v2_alt:1392041-1393116	0	+	1392041	1392041	8553170	2	475,466,	0,609,
#Deleted in new
chr6_GL000252v2_alt	1392648	1404652	chr6_GL000252v2_alt:1392648-1404652	1	+	1392954	1403729	789624	5	651,96,225,23,1011,	0,9262,10253,10788,10993,
#Deleted in new
chr6_GL000252v2_alt	1392927	1404652	chr6_GL000252v2_alt:1392927-1404652	1	+	1392954	1403729	789624	5	372,96,138,23,1011,	0,8983,10061,10509,10714,
#Deleted in new
chr6_GL000252v2_alt	1407861	1416850	chr6_GL000252v2_alt:1407861-1416850	1	-	1409604	1416774	789624	8	1827,176,33,116,23,231,96,505,	0,2366,3782,4994,5424,6453,7204,8484,
#Deleted in new
chr6_GL000252v2_alt	1407861	1416850	chr6_GL000252v2_alt:1407861-1416850	3	-	1409885	1416774	789624	7	2542,33,116,23,231,96,505,	0,3782,4994,5424,6453,7204,8484,
#Deleted in new
chr6_GL000252v2_alt	1419106	1428590	chr6_GL000252v2_alt:1419106-1428590	3	+	1419792	1428250	789624	8	860,96,231,9,14,116,33,858,	0,3970,5094,6035,6633,7295,7770,8626,
#Deleted in new
chr6_GL000252v2_alt	1419116	1428597	chr6_GL000252v2_alt:1419116-1428597	1	+	1419585	1428250	789624	7	850,96,231,23,116,33,865,	0,3960,5084,6025,7285,7760,8616,
#Deleted in new
chr6_GL000252v2_alt	1424213	1427856	chr6_GL000252v2_alt:1424213-1427856	0	+	1424213	1427856	789624	5	218,23,116,33,101,	0,928,2188,2663,3542,
#Deleted in new
chr6_GL000252v2_alt	1424257	1428597	chr6_GL000252v2_alt:1424257-1428597	0	+	1424257	1424257	8553170	6	174,23,116,33,65,124,	0,884,2144,2619,3475,4216,
#Deleted in new
chr6_GL000252v2_alt	1426213	1426998	chr6_GL000252v2_alt:1426213-1426998	0	+	1426213	1426213	8553170	2	304,122,	0,663,
#Deleted in new
chr6_GL000252v2_alt	1440326	1460647	chr6_GL000252v2_alt:1440326-1460647	1	-	1441747	1454985	789624	9	2104,33,116,23,231,96,488,49,110,	0,4719,4970,5565,12071,13984,14221,16590,20211,
#Deleted in new
chr6_GL000252v2_alt	1440326	1469242	chr6_GL000252v2_alt:1440326-1469242	1	-	1441747	1454985	789624	10	2104,33,116,23,231,96,599,104,110,62,	0,4719,4970,5565,12071,13984,14221,16590,20211,28854,
#Deleted in new
chr6_GL000252v2_alt	1440326	1469303	chr6_GL000252v2_alt:1440326-1469303	3	-	1441747	1454985	789624	9	2104,33,116,23,231,96,488,104,123,	0,4719,4970,5565,12071,13984,14221,16590,28854,
#Deleted in new
chr6_GL000252v2_alt	1440326	1446273	chr6_GL000252v2_alt:1440326-1446273	0	-	1440326	1440326	8553170	3	2104,33,977,	0,4719,4970,
#Deleted in new
chr6_GL000252v2_alt	1442669	1444493	chr6_GL000252v2_alt:1442669-1444493	7	-	1442669	1442669	16724991	2	840,363,	0,1461,
#Deleted in new
chr6_GL000252v2_alt	1452417	1469295	chr6_GL000252v2_alt:1452417-1469295	0	-	1452417	1454985	789624	6	211,96,488,104,110,115,	0,1893,2130,4499,8120,16763,
#Deleted in new
chr6_GL000252v2_alt	1452460	1460603	chr6_GL000252v2_alt:1452460-1460603	0	-	1452460	1454985	789624	5	168,96,263,89,66,	0,1850,2312,4456,8077,
#Deleted in new
chr6_GL000252v2_alt	1454372	1469261	chr6_GL000252v2_alt:1454372-1469261	0	-	1454372	1454985	789624	3	34,488,81,	0,175,14808,
#Deleted in new
chr6_GL000252v2_alt	1454619	1469242	chr6_GL000252v2_alt:1454619-1469242	0	-	1454619	1454985	789624	3	410,110,62,	0,5918,14561,
#Deleted in new
chr6_GL000252v2_alt	1454645	1469241	chr6_GL000252v2_alt:1454645-1469241	0	-	1454645	1454645	8553170	4	227,104,110,61,	0,2271,5892,14535,
#Deleted in new
chr6_GL000252v2_alt	1489908	1490347	chr6_GL000252v2_alt:1489908-1490347	0	-	1489908	1489908	8553170	2	230,120,	0,319,
#Deleted in new
chr6_GL000252v2_alt	1489908	1581974	chr6_GL000252v2_alt:1489908-1581974	3	-	1489908	1489908	789624	5	230,93,165,118,126,	0,319,8106,20306,91940,
#Deleted in new
chr6_GL000252v2_alt	1494170	1498147	chr6_GL000252v2_alt:1494170-1498147	7	+	1494170	1494170	16724991	3	405,96,252,	0,3373,3725,
#Deleted in new
chr6_GL000252v2_alt	1515465	1522820	chr6_GL000252v2_alt:1515465-1522820	5	+	1515465	1515465	16724991	7	101,158,211,276,117,48,3676,	0,330,800,1607,1990,2698,3679,
#Deleted in new
chr6_GL000252v2_alt	1515483	1518204	chr6_GL000252v2_alt:1515483-1518204	7	+	1515483	1515483	16724991	6	83,270,280,276,117,41,	0,200,713,1589,1972,2680,
#Deleted in new
chr6_GL000252v2_alt	1546654	1582227	chr6_GL000252v2_alt:1546654-1582227	0	-	1546654	1546654	8553170	4	1806,494,106,34,	0,3677,5338,35539,
#Deleted in new
chr6_GL000252v2_alt	1546866	1582174	chr6_GL000252v2_alt:1546866-1582174	0	-	1546866	1546866	8553170	4	3959,106,214,326,	0,5126,23243,34982,
#Deleted in new
chr6_GL000252v2_alt	1546866	1582226	chr6_GL000252v2_alt:1546866-1582226	0	-	1546866	1546866	8553170	4	1594,494,106,236,	0,3465,5126,35124,
#Deleted in new
chr6_GL000252v2_alt	1546866	1582216	chr6_GL000252v2_alt:1546866-1582216	0	-	1546866	1546866	8553170	3	3959,106,368,	0,5126,34982,
#Deleted in new
chr6_GL000252v2_alt	1546866	1582691	chr6_GL000252v2_alt:1546866-1582691	0	-	1546866	1546866	789624	5	1594,494,106,214,498,	0,3465,5126,23243,35327,
#Deleted in new
chr6_GL000252v2_alt	1546866	1582737	chr6_GL000252v2_alt:1546866-1582737	0	-	1546866	1546866	8553170	4	3959,106,214,38,	0,5126,23243,35833,
#Deleted in new
chr6_GL000252v2_alt	1546866	1582187	chr6_GL000252v2_alt:1546866-1582187	0	-	1546866	1546866	8553170	3	3959,106,197,	0,5126,35124,
#Deleted in new
chr6_GL000252v2_alt	1546866	1582990	chr6_GL000252v2_alt:1546866-1582990	3	-	1546866	1546866	789624	3	3959,106,797,	0,5126,35327,
#Deleted in new
chr6_GL000252v2_alt	1582318	1585592	chr6_GL000252v2_alt:1582318-1585592	0	+	1585158	1585592	789624	3	409,153,441,	0,2411,2833,
#Deleted in new
chr6_GL000252v2_alt	1582674	1585380	chr6_GL000252v2_alt:1582674-1585380	0	+	1585158	1585380	789624	4	161,45,153,229,	0,817,2055,2477,
#Deleted in new
chr6_GL000252v2_alt	1582683	1599575	chr6_GL000252v2_alt:1582683-1599575	3	+	1585158	1598105	0	8	152,153,460,96,231,23,116,2018,	0,2046,2468,3938,8907,13070,13667,14874,
#Deleted in new
chr6_GL000252v2_alt	1582683	1599574	chr6_GL000252v2_alt:1582683-1599574	1	+	1585158	1598105	0	9	152,153,460,96,231,23,90,116,2017,	0,2046,2468,3938,8907,13070,13434,13667,14874,
#Deleted in new
chr6_GL000252v2_alt	1582744	1591823	chr6_GL000252v2_alt:1582744-1591823	0	+	1585158	1591823	789624	5	91,133,460,96,233,	0,2005,2407,3877,8846,
#Deleted in new
chr6_GL000252v2_alt	1582759	1599575	chr6_GL000252v2_alt:1582759-1599575	1	+	1585158	1598105	0	9	76,45,133,460,96,231,23,116,2018,	0,732,1990,2392,3862,8831,12994,13591,14798,
#Deleted in new
chr6_GL000252v2_alt	1582796	1585336	chr6_GL000252v2_alt:1582796-1585336	0	+	1585158	1585336	789624	4	39,50,153,185,	0,690,1933,2355,
#Deleted in new
chr6_GL000252v2_alt	1583098	1599575	chr6_GL000252v2_alt:1583098-1599575	1	+	1585158	1598105	0	8	438,153,460,96,231,23,116,2018,	0,1631,2053,3523,8492,12655,13252,14459,
#Deleted in new
chr6_GL000252v2_alt	1583362	1585303	chr6_GL000252v2_alt:1583362-1585303	0	+	1585158	1585303	789624	3	174,133,152,	0,1387,1789,
#Deleted in new
chr6_GL000252v2_alt	1584729	1599575	chr6_GL000252v2_alt:1584729-1599575	1	+	1585158	1598105	0	8	153,460,96,231,23,90,116,2018,	0,422,1892,6861,11024,11388,11621,12828,
#Deleted in new
chr6_GL000252v2_alt	1585151	1602704	chr6_GL000252v2_alt:1585151-1602704	3	+	1585158	1602656	789624	10	460,96,231,23,116,185,101,83,126,146,	0,1470,6439,10602,11199,12406,15992,16185,17126,17407,
#Deleted in new
chr6_GL000252v2_alt	1585369	1597316	chr6_GL000252v2_alt:1585369-1597316	0	+	1585369	1597291	789624	6	242,96,231,23,34,82,	0,1252,6221,10384,10981,11865,
#Deleted in new
chr6_GL000252v2_alt	1600976	1602703	chr6_GL000252v2_alt:1600976-1602703	1	+	1601017	1602656	789624	5	98,101,107,126,145,	0,167,336,1301,1582,
#Deleted in new
chr6_GL000252v2_alt	1600979	1602339	chr6_GL000252v2_alt:1600979-1602339	0	+	1600979	1600979	8553170	4	95,101,439,62,	0,164,357,1298,
#Deleted in new
chr6_GL000252v2_alt	1600987	1602703	chr6_GL000252v2_alt:1600987-1602703	0	+	1600987	1600987	8553170	3	87,1260,145,	0,156,1571,
#Deleted in new
chr6_GL000252v2_alt	1600996	1602703	chr6_GL000252v2_alt:1600996-1602703	0	+	1600996	1600996	8553170	4	78,101,126,145,	0,147,1281,1562,
#Deleted in new
chr6_GL000252v2_alt	1600998	1602730	chr6_GL000252v2_alt:1600998-1602730	0	+	1600998	1600998	8553170	4	76,83,126,172,	0,338,1279,1560,
#Deleted in new
chr6_GL000252v2_alt	1601000	1602703	chr6_GL000252v2_alt:1601000-1602703	0	+	1601000	1601000	8553170	4	74,276,126,145,	0,143,1277,1558,
#Deleted in new
chr6_GL000252v2_alt	1601004	1602703	chr6_GL000252v2_alt:1601004-1602703	1	+	1601017	1602656	789624	5	70,101,83,126,145,	0,139,332,1273,1554,
#Deleted in new
chr6_GL000252v2_alt	1601004	1602703	chr6_GL000252v2_alt:1601004-1602703	1	+	1601017	1602656	789624	4	240,83,126,145,	0,332,1273,1554,
#Deleted in new
chr6_GL000252v2_alt	1601014	1602703	chr6_GL000252v2_alt:1601014-1602703	1	+	1601017	1602619	789624	5	60,101,83,133,145,	0,129,322,1263,1544,
#Deleted in new
chr6_GL000252v2_alt	1607261	1607396	chr6_GL000252v2_alt:1607261-1607396	7	+	1607261	1607261	16724991	1	135,	0,
#Deleted in new
chr6_GL000252v2_alt	1615124	1615758	chr6_GL000252v2_alt:1615124-1615758	7	-	1615124	1615124	16724991	1	634,	0,
#Deleted in new
chr6_GL000252v2_alt	1618956	1620125	chr6_GL000252v2_alt:1618956-1620125	7	-	1618956	1618956	16724991	1	1169,	0,
#Deleted in new
chr6_GL000252v2_alt	1670564	1675169	chr6_GL000252v2_alt:1670564-1675169	7	+	1670564	1670564	16724991	5	251,286,271,131,116,	0,517,1404,1791,4489,
#Deleted in new
chr6_GL000252v2_alt	1722321	1723864	chr6_GL000252v2_alt:1722321-1723864	7	+	1722321	1722321	16724991	2	414,853,	0,690,
#Deleted in new
chr6_GL000252v2_alt	1724755	1726125	chr6_GL000252v2_alt:1724755-1726125	7	+	1724755	1724755	16724991	1	1370,	0,
#Deleted in new
chr6_GL000252v2_alt	1741775	1742426	chr6_GL000252v2_alt:1741775-1742426	7	+	1741775	1741775	16724991	1	651,	0,
#Deleted in new
chr6_GL000252v2_alt	1745298	1750037	chr6_GL000252v2_alt:1745298-1750037	3	+	1745363	1748413	0	8	129,270,276,276,117,33,43,1457,	0,259,773,1670,2070,2937,3074,3282,
#Deleted in new
chr6_GL000252v2_alt	1745341	1746197	chr6_GL000252v2_alt:1745341-1746197	0	+	1745341	1745341	8553170	2	86,640,	0,216,
#Deleted in new
chr6_GL000252v2_alt	1745343	1747115	chr6_GL000252v2_alt:1745343-1747115	0	+	1745343	1745343	8553170	3	484,276,147,	0,728,1625,
#Deleted in new
chr6_GL000252v2_alt	1772089	1775044	chr6_GL000252v2_alt:1772089-1775044	3	+	1772089	1772089	8553170	2	346,505,	0,2450,
#Deleted in new
chr6_GL000252v2_alt	1797199	1812998	chr6_GL000252v2_alt:1797199-1812998	3	-	1801894	1812027	789624	12	4937,141,163,179,195,96,208,72,152,137,166,1044,	0,5319,5735,5975,11091,11708,11974,13199,13388,13679,14179,14755,
#Deleted in new
chr6_GL000252v2_alt	1802307	1808370	chr6_GL000252v2_alt:1802307-1808370	0	-	1802307	1802307	8553170	4	352,163,179,80,	0,627,867,5983,
#Deleted in new
chr6_GL000252v2_alt	1803018	1803640	chr6_GL000252v2_alt:1803018-1803640	0	-	1803018	1803018	8553170	2	79,466,	0,156,
#Deleted in new
chr6_GL000252v2_alt	1808000	1808944	chr6_GL000252v2_alt:1808000-1808944	0	-	1808000	1808000	8553170	2	485,37,	0,907,
#Deleted in new
chr6_GL000252v2_alt	1809183	1811912	chr6_GL000252v2_alt:1809183-1811912	0	-	1809183	1811611	789624	5	198,72,152,137,534,	0,1215,1404,1695,2195,
#Deleted in new
chr6_GL000252v2_alt	1812709	1819547	chr6_GL000252v2_alt:1812709-1819547	3	+	1813168	1818319	789624	4	565,63,291,1335,	0,1264,4948,5503,
#Deleted in new
chr6_GL000252v2_alt	1813103	1819547	chr6_GL000252v2_alt:1813103-1819547	1	+	1813168	1818319	789624	3	171,291,1335,	0,4554,5109,
#Deleted in new
chr6_GL000252v2_alt	1813137	1819547	chr6_GL000252v2_alt:1813137-1819547	0	+	1813137	1813137	8553170	4	137,181,291,1335,	0,4014,4520,5075,
#Deleted in new
chr6_GL000252v2_alt	1813139	1819547	chr6_GL000252v2_alt:1813139-1819547	0	+	1813139	1813139	8553170	5	135,63,181,291,1335,	0,834,4012,4518,5073,
#Deleted in new
chr6_GL000252v2_alt	1813170	1814260	chr6_GL000252v2_alt:1813170-1814260	0	+	1813170	1813170	8553170	2	104,287,	0,803,
#Deleted in new
chr6_GL000252v2_alt	1815854	1819547	chr6_GL000252v2_alt:1815854-1819547	0	+	1815854	1815854	8553170	2	2094,1335,	0,2358,
#Deleted in new
chr6_GL000252v2_alt	1827202	1847258	chr6_GL000252v2_alt:1827202-1847258	3	+	1827314	1846527	789624	25	185,47,96,127,38,108,75,114,114,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,898,	0,6037,6446,6704,6976,7098,8560,9034,11024,11696,12238,12435,12822,13048,13890,14188,14509,14764,15104,15271,18311,18429,18772,18929,19158,
#Deleted in new
chr6_GL000252v2_alt	1827219	1847258	chr6_GL000252v2_alt:1827219-1847258	1	+	1827314	1846527	789624	24	168,47,96,127,38,108,75,114,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,898,	0,6020,6429,6687,6959,7081,8543,9017,11679,12221,12418,12805,13031,13873,14171,14492,14747,15087,15254,18294,18412,18755,18912,19141,
#Deleted in new
chr6_GL000252v2_alt	1827259	1839541	chr6_GL000252v2_alt:1827259-1839541	0	+	1827314	1839541	789624	11	128,47,96,130,38,108,75,114,114,123,101,	0,5980,6389,6644,6919,7041,8503,8977,10967,11639,12181,
#Deleted in new
chr6_GL000252v2_alt	1827268	1836279	chr6_GL000252v2_alt:1827268-1836279	0	+	1827268	1827268	8553170	7	119,96,127,38,108,75,43,	0,6380,6638,6910,7032,8494,8968,
#Deleted in new
chr6_GL000252v2_alt	1827278	1847258	chr6_GL000252v2_alt:1827278-1847258	1	+	1827314	1846527	789624	8	109,47,96,99,97,65,73,898,	0,5961,6370,6628,18425,18696,18853,19082,
#Deleted in new
chr6_GL000252v2_alt	1838297	1853009	chr6_GL000252v2_alt:1838297-1853009	0	+	1838297	1838297	8553170	18	43,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,628,612,	0,601,1143,1340,1727,1953,2795,3093,3414,3669,4009,4176,7216,7334,7677,7834,8063,14100,
#Deleted in new
chr6_GL000252v2_alt	1845254	1846570	chr6_GL000252v2_alt:1845254-1846570	0	+	1845254	1845254	8553170	4	546,65,73,210,	0,720,877,1106,
#Deleted in new
chr6_GL000252v2_alt	1856229	1873074	chr6_GL000252v2_alt:1856229-1873074	3	-	1857378	1865774	789624	20	1259,756,114,76,195,64,247,159,148,101,113,106,174,78,52,136,87,118,521,21,	0,1536,2446,2810,3072,3380,3608,3953,4188,4594,5523,5738,6068,6379,7440,8379,8677,9438,16078,16824,
#Deleted in new
chr6_GL000252v2_alt	1859402	1860042	chr6_GL000252v2_alt:1859402-1860042	0	-	1859402	1859402	8553170	2	271,205,	0,435,
#Deleted in new
chr6_GL000252v2_alt	1860441	1861828	chr6_GL000252v2_alt:1860441-1861828	0	-	1860441	1860441	8553170	2	483,76,	0,1311,
#Deleted in new
chr6_GL000252v2_alt	1860847	1862567	chr6_GL000252v2_alt:1860847-1862567	0	-	1860847	1860847	8553170	4	77,113,106,270,	0,905,1120,1450,
#Deleted in new
chr6_GL000252v2_alt	1861638	1862073	chr6_GL000252v2_alt:1861638-1862073	0	-	1861638	1861638	8553170	2	227,106,	0,329,
#Deleted in new
chr6_GL000252v2_alt	1865776	1873074	chr6_GL000252v2_alt:1865776-1873074	0	-	1865776	1865776	8553170	4	9,54,521,21,	0,4602,6531,7277,
#Deleted in new
chr6_GL000252v2_alt	1872413	1874442	chr6_GL000252v2_alt:1872413-1874442	0	-	1872413	1872413	8553170	2	415,55,	0,1974,
#Deleted in new
chr6_GL000252v2_alt	1873538	1882225	chr6_GL000252v2_alt:1873538-1882225	3	+	1873695	1881627	0	7	235,109,98,69,67,60,894,	0,1784,2000,2212,5123,7174,7793,
#Deleted in new
chr6_GL000252v2_alt	1873672	1875954	chr6_GL000252v2_alt:1873672-1875954	0	+	1873672	1873672	8553170	4	101,109,98,204,	0,1650,1866,2078,
#Deleted in new
chr6_GL000252v2_alt	1873681	1882225	chr6_GL000252v2_alt:1873681-1882225	0	+	1873681	1873681	8553170	5	92,497,67,60,894,	0,1641,4980,7031,7650,
#Deleted in new
chr6_GL000252v2_alt	1873689	1882225	chr6_GL000252v2_alt:1873689-1882225	1	+	1873695	1881627	789624	5	84,109,98,67,894,	0,1633,1849,4972,7642,
#Deleted in new
chr6_GL000252v2_alt	1873689	1882225	chr6_GL000252v2_alt:1873689-1882225	0	+	1873689	1873689	8553170	7	84,109,126,69,67,60,894,	0,1633,1821,2061,4972,7023,7642,
#Deleted in new
chr6_GL000252v2_alt	1882671	1900508	chr6_GL000252v2_alt:1882671-1900508	1	+	1882715	1898844	0	9	151,61,92,61,114,102,46,72,1912,	0,618,794,1009,1190,1487,13534,15333,15925,
#Deleted in new
chr6_GL000252v2_alt	1882685	1902652	chr6_GL000252v2_alt:1882685-1902652	1	+	1882715	1902472	0	13	137,61,92,61,114,102,46,69,72,244,80,43,355,	0,604,780,995,1176,1473,13520,13678,15319,15911,19038,19210,19612,
#Deleted in new
chr6_GL000252v2_alt	1882704	1900508	chr6_GL000252v2_alt:1882704-1900508	1	+	1882715	1899391	0	10	118,61,92,61,114,102,46,72,244,1151,	0,585,761,976,1157,1454,13501,15300,15892,16653,
#Deleted in new
chr6_GL000252v2_alt	1882705	1900508	chr6_GL000252v2_alt:1882705-1900508	1	+	1882715	1898844	0	10	117,61,92,61,114,102,46,69,72,1912,	0,584,760,975,1156,1453,13500,13658,15299,15891,
#Deleted in new
chr6_GL000252v2_alt	1882715	1902652	chr6_GL000252v2_alt:1882715-1902652	1	+	1883033	1902472	0	13	389,61,92,61,114,102,46,69,72,244,80,43,355,	0,574,750,965,1146,1443,13490,13648,15289,15881,19008,19180,19582,
#Deleted in new
chr6_GL000252v2_alt	1882715	1900508	chr6_GL000252v2_alt:1882715-1900508	1	+	1882715	1899391	0	11	107,61,92,61,114,102,46,69,72,244,1151,	0,574,750,965,1146,1443,13490,13648,15289,15881,16642,
#Deleted in new
chr6_GL000252v2_alt	1882722	1902652	chr6_GL000252v2_alt:1882722-1902652	0	+	1882722	1882722	8553170	12	100,61,92,61,114,102,46,69,72,80,43,355,	0,567,743,958,1139,1436,13483,13641,15282,19001,19173,19575,
#Deleted in new
chr6_GL000252v2_alt	1882744	1896527	chr6_GL000252v2_alt:1882744-1896527	0	+	1882744	1882744	8553170	8	78,61,92,61,114,102,46,164,	0,545,721,936,1117,1414,13461,13619,
#Deleted in new
chr6_GL000252v2_alt	1882749	1902652	chr6_GL000252v2_alt:1882749-1902652	0	+	1882749	1882749	789624	11	73,61,92,61,114,102,46,69,72,80,757,	0,540,716,931,1112,1409,13456,13614,15255,18974,19146,
#Deleted in new
chr6_GL000252v2_alt	1884229	1902231	chr6_GL000252v2_alt:1884229-1902231	0	+	1884229	1884229	8553170	6	31,46,72,80,43,128,	0,11976,13775,17494,17666,17874,
#Deleted in new
chr6_GL000252v2_alt	1889460	1889727	chr6_GL000252v2_alt:1889460-1889727	7	+	1889460	1889460	16724991	1	267,	0,
#Deleted in new
chr6_GL000252v2_alt	1897650	1902652	chr6_GL000252v2_alt:1897650-1902652	0	+	1897650	1897650	8553170	4	49,72,215,355,	0,354,4073,4647,
#Deleted in new
chr6_GL000252v2_alt	1898747	1902652	chr6_GL000252v2_alt:1898747-1902652	2	+	1898747	1898747	8553170	3	93,79,757,	0,2977,3148,
#Deleted in new
chr6_GL000252v2_alt	1902867	1907114	chr6_GL000252v2_alt:1902867-1907114	0	+	1902867	1902867	8553170	4	265,209,89,20,	0,2712,3955,4227,
#Deleted in new
chr6_GL000252v2_alt	1902883	1908932	chr6_GL000252v2_alt:1902883-1908932	0	+	1902883	1902883	8553170	6	249,402,107,201,70,308,	0,2503,3939,4211,5587,5741,
#Deleted in new
chr6_GL000252v2_alt	1902901	1908932	chr6_GL000252v2_alt:1902901-1908932	1	+	1903060	1908738	789624	6	231,402,89,201,70,308,	0,2485,3921,4193,5569,5723,
#Deleted in new
chr6_GL000252v2_alt	1902954	1908536	chr6_GL000252v2_alt:1902954-1908536	0	+	1902954	1902954	8553170	3	178,201,66,	0,4140,5516,
#Deleted in new
chr6_GL000252v2_alt	1902992	1908932	chr6_GL000252v2_alt:1902992-1908932	3	+	1903060	1908738	789624	5	140,89,201,70,308,	0,3830,4102,5478,5632,
#Deleted in new
chr6_GL000252v2_alt	1903014	1905742	chr6_GL000252v2_alt:1903014-1905742	0	+	1903014	1903014	8553170	3	118,241,356,	0,420,2372,
#Deleted in new
chr6_GL000252v2_alt	1903249	1908932	chr6_GL000252v2_alt:1903249-1908932	0	+	1903249	1908738	789624	6	426,402,89,201,70,308,	0,2137,3573,3845,5221,5375,
#Deleted in new
chr6_GL000252v2_alt	1906882	1908932	chr6_GL000252v2_alt:1906882-1908932	0	+	1906882	1906882	8553170	3	29,201,462,	0,212,1588,
#Deleted in new
chr6_GL000252v2_alt	1908941	1928891	chr6_GL000252v2_alt:1908941-1928891	3	-	1909064	1928695	789624	20	252,174,162,163,68,119,163,141,153,99,211,116,111,192,204,255,57,163,239,403,	0,1618,2087,2347,3110,3303,3509,3864,6384,6648,6944,9539,9823,11713,11983,12391,17322,17702,17948,19547,
#Deleted in new
chr6_GL000252v2_alt	1908941	1917837	chr6_GL000252v2_alt:1908941-1917837	1	-	1909064	1917710	789624	12	252,174,162,163,68,119,163,141,153,99,211,228,	0,1618,2087,2347,3110,3303,3509,3864,6384,6648,6944,8668,
#Deleted in new
chr6_GL000252v2_alt	1915326	1916431	chr6_GL000252v2_alt:1915326-1916431	0	-	1915326	1915326	8553170	3	152,99,546,	0,263,559,
#Deleted in new
chr6_GL000252v2_alt	1920983	1928842	chr6_GL000252v2_alt:1920983-1928842	0	-	1920983	1928836	789624	6	145,255,57,163,239,33,	0,349,5280,5660,5906,7826,
#Deleted in new
chr6_GL000252v2_alt	1932242	1943070	chr6_GL000252v2_alt:1932242-1943070	1	-	1933122	1941872	789624	4	900,211,1639,103,	0,2790,8019,10725,
#Deleted in new
chr6_GL000252v2_alt	1932242	1943749	chr6_GL000252v2_alt:1932242-1943749	3	-	1933122	1941872	789624	3	900,211,3488,	0,2790,8019,
#Deleted in new
chr6_GL000252v2_alt	1932242	1943012	chr6_GL000252v2_alt:1932242-1943012	0	-	1932242	1932242	8553170	3	900,211,45,	0,2790,10725,
#Deleted in new
chr6_GL000252v2_alt	1932242	1943047	chr6_GL000252v2_alt:1932242-1943047	0	-	1932242	1932242	8553170	4	900,211,137,80,	0,2790,8019,10725,
#Deleted in new
chr6_GL000252v2_alt	1943900	1947274	chr6_GL000252v2_alt:1943900-1947274	3	-	1944514	1946828	789624	5	896,177,197,440,45,	0,1229,2000,2795,3329,
#Deleted in new
chr6_GL000252v2_alt	1943900	1946577	chr6_GL000252v2_alt:1943900-1946577	0	-	1944514	1946577	789624	4	896,177,197,131,	0,1229,2000,2546,
#Deleted in new
chr6_GL000252v2_alt	1943900	1946830	chr6_GL000252v2_alt:1943900-1946830	1	-	1944514	1946828	789624	3	896,197,135,	0,2000,2795,
#Deleted in new
chr6_GL000252v2_alt	1943900	1946840	chr6_GL000252v2_alt:1943900-1946840	0	-	1943900	1943900	8553170	3	896,219,145,	0,1978,2795,
#Deleted in new
chr6_GL000252v2_alt	1943900	1946828	chr6_GL000252v2_alt:1943900-1946828	0	-	1943900	1943900	8553170	2	896,133,	0,2795,
#Deleted in new
chr6_GL000252v2_alt	1943900	1946207	chr6_GL000252v2_alt:1943900-1946207	0	-	1943900	1943900	8553170	2	896,307,	0,2000,
#Deleted in new
chr6_GL000252v2_alt	1943900	1946821	chr6_GL000252v2_alt:1943900-1946821	0	-	1943900	1943900	789624	3	896,177,126,	0,1229,2795,
#Deleted in new
chr6_GL000252v2_alt	1943900	1946856	chr6_GL000252v2_alt:1943900-1946856	0	-	1943900	1943900	789624	4	896,177,219,161,	0,1229,1978,2795,
#Deleted in new
chr6_GL000252v2_alt	1943903	1947162	chr6_GL000252v2_alt:1943903-1947162	1	-	1944514	1946828	789624	4	893,177,197,467,	0,1226,1997,2792,
#Deleted in new
chr6_GL000252v2_alt	1952657	1953387	chr6_GL000252v2_alt:1952657-1953387	7	-	1952657	1952657	16724991	1	730,	0,
#Deleted in new
chr6_GL000252v2_alt	1955658	1973740	chr6_GL000252v2_alt:1955658-1973740	1	-	1956316	1971026	0	15	826,111,126,183,120,2478,71,792,93,60,1481,70,381,139,645,	0,2746,2945,3297,3611,3814,7576,7758,11604,11859,12066,13840,13995,15232,17437,
#Deleted in new
chr6_GL000252v2_alt	1956166	1959933	chr6_GL000252v2_alt:1956166-1959933	0	-	1956166	1956166	8553170	5	318,111,126,183,664,	0,2238,2437,2789,3103,
#Deleted in new
chr6_GL000252v2_alt	1958918	1969035	chr6_GL000252v2_alt:1958918-1969035	3	+	1958918	1958918	789624	3	127,114,497,	0,9244,9620,
#Deleted in new
chr6_GL000252v2_alt	1961299	1967765	chr6_GL000252v2_alt:1961299-1967765	0	-	1961299	1967765	789624	5	651,71,93,60,41,	0,1935,5963,6218,6425,
#Deleted in new
chr6_GL000252v2_alt	1961433	1963536	chr6_GL000252v2_alt:1961433-1963536	0	-	1961433	1961433	8553170	2	517,302,	0,1801,
#Deleted in new
chr6_GL000252v2_alt	1967322	1967782	chr6_GL000252v2_alt:1967322-1967782	0	-	1967322	1967322	8553170	3	30,60,58,	0,195,402,
#Deleted in new
chr6_GL000252v2_alt	1969058	1972926	chr6_GL000252v2_alt:1969058-1972926	3	-	1969555	1971026	789624	7	147,70,20,107,153,139,194,	0,440,595,618,823,1832,3674,
#Deleted in new
chr6_GL000252v2_alt	1969683	1973026	chr6_GL000252v2_alt:1969683-1973026	0	-	1969683	1971026	789624	3	351,139,92,	0,1207,3251,
#Deleted in new
chr6_GL000252v2_alt	1969790	1973298	chr6_GL000252v2_alt:1969790-1973298	0	-	1969790	1971026	789624	3	244,139,199,	0,1100,3309,
#Deleted in new
chr6_GL000252v2_alt	1969830	1972972	chr6_GL000252v2_alt:1969830-1972972	0	-	1969830	1971026	789624	3	204,139,240,	0,1060,2902,
#Deleted in new
chr6_GL000252v2_alt	1976050	1981276	chr6_GL000252v2_alt:1976050-1981276	3	+	1976356	1980247	0	4	363,109,111,2087,	0,2336,2717,3139,
#Deleted in new
chr6_GL000252v2_alt	1977423	1981276	chr6_GL000252v2_alt:1977423-1981276	1	+	1978817	1980247	789624	4	325,109,111,2087,	0,963,1344,1766,
#Deleted in new
chr6_GL000252v2_alt	1977516	1981276	chr6_GL000252v2_alt:1977516-1981276	1	+	1978109	1980247	789624	4	596,109,111,2087,	0,870,1251,1673,
#Deleted in new
chr6_GL000252v2_alt	1977548	1981276	chr6_GL000252v2_alt:1977548-1981276	1	+	1978817	1980247	789624	4	516,109,111,2087,	0,838,1219,1641,
#Deleted in new
chr6_GL000252v2_alt	1983558	1998584	chr6_GL000252v2_alt:1983558-1998584	1	-	1983965	1998040	789624	13	437,165,138,46,182,153,96,120,144,91,76,57,207,	0,2313,2719,2973,3210,12450,12788,12971,13482,13906,14084,14439,14819,
#Deleted in new
chr6_GL000252v2_alt	1983558	1996704	chr6_GL000252v2_alt:1983558-1996704	0	-	1983558	1983558	8553170	7	437,165,138,419,153,96,175,	0,2313,2719,2973,12450,12788,12971,
#Deleted in new
chr6_GL000252v2_alt	1986768	1998158	chr6_GL000252v2_alt:1986768-1998158	0	-	1986768	1998018	789624	6	182,153,96,120,144,161,	0,9240,9578,9761,10272,11229,
#Deleted in new
chr6_GL000252v2_alt	1986840	1996645	chr6_GL000252v2_alt:1986840-1996645	0	-	1986840	1986840	8553170	3	110,153,299,	0,9168,9506,
#Deleted in new
chr6_GL000252v2_alt	1986916	1998351	chr6_GL000252v2_alt:1986916-1998351	0	-	1986916	1998040	789624	9	34,153,96,120,144,91,76,57,117,	0,9092,9430,9613,10124,10548,10726,11081,11318,
#Deleted in new
chr6_GL000252v2_alt	1992154	1992265	chr6_GL000252v2_alt:1992154-1992265	3	-	1992154	1992154	8553170	1	111,	0,
#Deleted in new
chr6_GL000252v2_alt	1996008	1998583	chr6_GL000252v2_alt:1996008-1998583	0	-	1996008	1996008	8553170	7	153,96,120,144,76,57,206,	0,338,521,1032,1634,1989,2369,
#Deleted in new
chr6_GL000252v2_alt	1996011	1998208	chr6_GL000252v2_alt:1996011-1998208	0	-	1996011	1998186	789624	3	150,96,211,	0,335,1986,
#Deleted in new
chr6_GL000252v2_alt	1996026	1998127	chr6_GL000252v2_alt:1996026-1998127	2	-	1996026	1998040	789624	7	135,96,120,144,91,76,130,	0,320,503,1014,1438,1616,1971,
#Deleted in new
chr6_GL000252v2_alt	1996104	1998557	chr6_GL000252v2_alt:1996104-1998557	0	-	1996104	1996104	8553170	7	57,96,120,515,76,57,180,	0,242,425,936,1538,1893,2273,
#Deleted in new
chr6_GL000252v2_alt	1996105	1998054	chr6_GL000252v2_alt:1996105-1998054	0	-	1996105	1998040	789624	7	56,96,120,144,43,76,57,	0,241,424,935,1407,1537,1892,
#Deleted in new
chr6_GL000252v2_alt	1996359	1998375	chr6_GL000252v2_alt:1996359-1998375	0	-	1996359	1998040	789624	7	83,120,144,91,76,57,58,	0,170,681,1105,1283,1638,1958,
#Deleted in new
chr6_GL000252v2_alt	1997204	1998528	chr6_GL000252v2_alt:1997204-1998528	0	-	1997204	1997204	8553170	2	850,151,	0,1173,
#Deleted in new
chr6_GL000252v2_alt	1999049	2000405	chr6_GL000252v2_alt:1999049-2000405	3	-	1999786	2000369	789624	2	998,246,	0,1110,
#Deleted in new
chr6_GL000252v2_alt	1999049	2000399	chr6_GL000252v2_alt:1999049-2000399	1	-	1999952	2000369	789624	1	1350,	0,
#Deleted in new
chr6_GL000252v2_alt	2007008	2007260	chr6_GL000252v2_alt:2007008-2007260	3	+	2007008	2007008	8553170	1	252,	0,
#Deleted in new
chr6_GL000252v2_alt	2022798	2048530	chr6_GL000252v2_alt:2022798-2048530	3	+	2022798	2022798	8553170	4	127,182,68,825,	0,22163,24370,24907,
#Deleted in new
chr6_GL000252v2_alt	2037926	2048530	chr6_GL000252v2_alt:2037926-2048530	0	+	2037926	2037926	8553170	3	169,182,825,	0,7035,9779,
#Deleted in new
chr6_GL000252v2_alt	2054922	2086923	chr6_GL000252v2_alt:2054922-2086923	0	-	2054922	2054922	8553170	2	119,146,	0,31855,
#Deleted in new
chr6_GL000252v2_alt	2069152	2086923	chr6_GL000252v2_alt:2069152-2086923	3	-	2069152	2069152	789624	2	1926,146,	0,17625,
#Deleted in new
chr6_GL000252v2_alt	2095786	2104421	chr6_GL000252v2_alt:2095786-2104421	3	-	2095786	2095786	789624	3	494,113,192,	0,7510,8443,
#Deleted in new
chr6_GL000252v2_alt	2120522	2120825	chr6_GL000252v2_alt:2120522-2120825	3	+	2120522	2120522	8553170	1	303,	0,
#Deleted in new
chr6_GL000252v2_alt	2123254	2132199	chr6_GL000252v2_alt:2123254-2132199	3	-	2123254	2123254	8553170	2	2852,1142,	0,7803,
#Deleted in new
chr6_GL000252v2_alt	2137269	2148505	chr6_GL000252v2_alt:2137269-2148505	0	+	2137269	2137269	8553170	7	151,127,103,229,148,100,194,	0,7712,7932,8226,9997,10404,11042,
#Deleted in new
chr6_GL000252v2_alt	2137322	2156466	chr6_GL000252v2_alt:2137322-2156466	3	+	2145023	2155606	0	20	98,173,56,127,103,229,148,100,187,247,96,152,166,111,245,128,219,235,150,1001,	0,3509,4596,7659,7879,8173,9944,10351,10989,11283,12055,12259,13493,14391,15608,16001,16366,17060,17875,18143,
#Deleted in new
chr6_GL000252v2_alt	2137589	2141001	chr6_GL000252v2_alt:2137589-2141001	0	+	2137589	2137589	8553170	2	76,170,	0,3242,
#Deleted in new
chr6_GL000252v2_alt	2139384	2147292	chr6_GL000252v2_alt:2139384-2147292	0	+	2145023	2147292	789624	5	75,127,103,229,26,	0,5597,5817,6111,7882,
#Deleted in new
chr6_GL000252v2_alt	2140072	2156466	chr6_GL000252v2_alt:2140072-2156466	1	+	2145023	2155606	0	19	151,173,127,103,229,148,100,187,247,96,152,166,111,245,128,219,235,150,1001,	0,759,4909,5129,5423,7194,7601,8239,8533,9305,9509,10743,11641,12858,13251,13616,14310,15125,15393,
#Deleted in new
chr6_GL000252v2_alt	2140356	2156466	chr6_GL000252v2_alt:2140356-2156466	1	+	2145023	2155606	0	19	83,173,56,127,103,229,148,100,187,247,96,152,166,245,128,219,235,150,1001,	0,475,1562,4625,4845,5139,6910,7317,7955,8249,9021,9225,10459,12574,12967,13332,14026,14841,15109,
#Deleted in new
chr6_GL000252v2_alt	2140646	2145724	chr6_GL000252v2_alt:2140646-2145724	0	+	2145023	2145724	789624	5	358,56,127,103,229,	0,1272,4335,4555,4849,
#Deleted in new
chr6_GL000252v2_alt	2140751	2145306	chr6_GL000252v2_alt:2140751-2145306	0	+	2145023	2145306	789624	3	253,127,105,	0,4230,4450,
#Deleted in new
chr6_GL000252v2_alt	2140843	2156462	chr6_GL000252v2_alt:2140843-2156462	1	+	2145023	2155606	0	19	161,56,127,103,229,148,100,187,247,96,152,166,111,245,128,219,235,150,997,	0,1075,4138,4358,4652,6423,6830,7468,7762,8534,8738,9972,10870,12087,12480,12845,13539,14354,14622,
#Deleted in new
chr6_GL000252v2_alt	2140849	2156466	chr6_GL000252v2_alt:2140849-2156466	0	+	2140849	2140849	8553170	16	155,127,103,229,148,187,247,96,152,166,245,128,219,235,150,1001,	0,4132,4352,4646,6417,7462,7756,8528,8732,9966,12081,12474,12839,13533,14348,14616,
#Deleted in new
chr6_GL000252v2_alt	2140859	2156466	chr6_GL000252v2_alt:2140859-2156466	1	+	2145023	2155606	0	17	145,127,103,229,148,100,187,247,96,152,166,245,128,219,235,150,1001,	0,4122,4342,4636,6407,6814,7452,7746,8518,8722,9956,12071,12464,12829,13523,14338,14606,
#Deleted in new
chr6_GL000252v2_alt	2141273	2156462	chr6_GL000252v2_alt:2141273-2156462	1	+	2141513	2155606	0	17	252,127,103,229,148,100,187,247,96,152,166,245,128,219,235,150,997,	0,3708,3928,4222,5993,6400,7038,7332,8104,8308,9542,11657,12050,12415,13109,13924,14192,
#Deleted in new
chr6_GL000252v2_alt	2141519	2147736	chr6_GL000252v2_alt:2141519-2147736	0	+	2145023	2147736	789624	6	129,127,103,229,148,63,	0,3462,3682,3976,5747,6154,
#Deleted in new
chr6_GL000252v2_alt	2144682	2156466	chr6_GL000252v2_alt:2144682-2156466	1	+	2145023	2155606	0	16	426,103,229,148,100,187,247,96,152,166,245,128,219,235,150,1001,	0,519,813,2584,2991,3629,3923,4695,4899,6133,8248,8641,9006,9700,10515,10783,
#Deleted in new
chr6_GL000252v2_alt	2144981	2156462	chr6_GL000252v2_alt:2144981-2156462	1	+	2145023	2155606	789624	15	127,103,229,148,100,187,247,96,152,84,128,219,235,150,997,	0,220,514,2285,2692,3330,3624,4396,4600,5916,8342,8707,9401,10216,10484,
#Deleted in new
chr6_GL000252v2_alt	2145023	2148478	chr6_GL000252v2_alt:2145023-2148478	1	+	2145023	2148478	0	5	85,103,229,148,167,	0,178,472,2243,3288,
#Deleted in new
chr6_GL000252v2_alt	2147435	2148488	chr6_GL000252v2_alt:2147435-2148488	0	+	2147435	2147435	8553170	2	338,177,	0,876,
#Deleted in new
chr6_GL000252v2_alt	2147720	2154449	chr6_GL000252v2_alt:2147720-2154449	0	+	2147720	2154449	789624	11	53,187,247,96,152,84,111,135,128,219,67,	0,591,885,1657,1861,3177,3993,5320,5603,5968,6662,
#Deleted in new
chr6_GL000252v2_alt	2149664	2153356	chr6_GL000252v2_alt:2149664-2153356	0	+	2149664	2149664	8553170	3	69,166,33,	0,1151,3659,
#Deleted in new
chr6_GL000252v2_alt	2152930	2156466	chr6_GL000252v2_alt:2152930-2156466	0	+	2152930	2155606	789624	6	245,128,237,235,150,1001,	0,393,740,1452,2267,2535,
#Deleted in new
chr6_GL000252v2_alt	2153384	2155714	chr6_GL000252v2_alt:2153384-2155714	0	+	2153384	2153384	8553170	4	67,219,235,517,	0,304,998,1813,
#Deleted in new
chr6_GL000252v2_alt	2164487	2170410	chr6_GL000252v2_alt:2164487-2170410	3	+	2165340	2170287	0	14	220,140,105,132,97,89,112,69,84,133,131,48,79,296,	0,850,1251,1748,2481,2669,2974,3247,3500,3830,4144,4926,5125,5627,
#Deleted in new
chr6_GL000252v2_alt	2164524	2170410	chr6_GL000252v2_alt:2164524-2170410	1	+	2165340	2170287	0	14	158,140,105,132,97,89,112,69,84,133,131,48,79,296,	0,813,1214,1711,2444,2632,2937,3210,3463,3793,4107,4889,5088,5590,
#Deleted in new
chr6_GL000252v2_alt	2164526	2166938	chr6_GL000252v2_alt:2164526-2166938	0	+	2165340	2166938	789624	5	181,140,105,132,40,	0,811,1212,1709,2372,
#Deleted in new
chr6_GL000252v2_alt	2164545	2182776	chr6_GL000252v2_alt:2164545-2182776	0	+	2164545	2164545	8553170	41	162,140,105,132,97,89,112,69,84,445,48,79,1227,82,101,122,67,98,107,120,112,89,91,128,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,351,	0,792,1193,1690,2423,2611,2916,3189,3442,3772,4868,5067,5569,6914,7113,7504,7739,7902,8634,8861,9451,10583,11514,11862,12106,12441,12838,13003,13362,13698,13889,14223,14479,14671,14877,15126,16127,17046,17316,17651,17880,
#Deleted in new
chr6_GL000252v2_alt	2165745	2168697	chr6_GL000252v2_alt:2165745-2168697	0	+	2165745	2165745	8553170	8	98,132,97,89,112,69,463,66,	0,490,1223,1411,1716,1989,2242,2886,
#Deleted in new
chr6_GL000252v2_alt	2168254	2170410	chr6_GL000252v2_alt:2168254-2170410	0	+	2168254	2168254	8553170	3	508,278,296,	0,1159,1860,
#Deleted in new
chr6_GL000252v2_alt	2168526	2170410	chr6_GL000252v2_alt:2168526-2170410	0	+	2168526	2168526	8553170	4	236,48,79,296,	0,887,1086,1588,
#Deleted in new
chr6_GL000252v2_alt	2170508	2182776	chr6_GL000252v2_alt:2170508-2182776	3	+	2171140	2182527	789624	29	833,82,101,122,67,98,82,120,112,89,91,128,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,351,	0,951,1150,1541,1776,1939,2671,2898,3488,4620,5551,5899,6143,6478,6875,7040,7399,7735,7926,8260,8516,8708,8914,9163,10164,11083,11353,11688,11917,
#Deleted in new
chr6_GL000252v2_alt	2170508	2182773	chr6_GL000252v2_alt:2170508-2182773	3	+	2171140	2182527	789624	29	833,82,101,122,67,98,82,120,112,89,91,122,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,348,	0,951,1150,1541,1776,1939,2671,2898,3488,4620,5551,5905,6143,6478,6875,7040,7399,7735,7926,8260,8516,8708,8914,9163,10164,11083,11353,11688,11917,
#Deleted in new
chr6_GL000252v2_alt	2170555	2174101	chr6_GL000252v2_alt:2170555-2174101	0	+	2171140	2174101	789624	10	93,233,82,101,122,67,98,82,120,105,	0,553,904,1103,1494,1729,1892,2624,2851,3441,
#Deleted in new
chr6_GL000252v2_alt	2170569	2174108	chr6_GL000252v2_alt:2170569-2174108	0	+	2170569	2170569	8553170	9	79,82,101,122,67,98,82,120,112,	0,890,1089,1480,1715,1878,2610,2837,3427,
#Deleted in new
chr6_GL000252v2_alt	2170634	2182773	chr6_GL000252v2_alt:2170634-2182773	1	+	2170715	2182527	789624	30	139,233,82,101,122,67,98,82,120,112,89,91,128,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,348,	0,474,825,1024,1415,1650,1813,2545,2772,3362,4494,5425,5773,6017,6352,6749,6914,7273,7609,7800,8134,8390,8582,8788,9037,10038,10957,11227,11562,11791,
#Deleted in new
chr6_GL000252v2_alt	2170685	2171720	chr6_GL000252v2_alt:2170685-2171720	0	+	2171140	2171720	789624	4	88,228,82,62,	0,428,774,973,
#Deleted in new
chr6_GL000252v2_alt	2172723	2174063	chr6_GL000252v2_alt:2172723-2174063	0	+	2172723	2172723	8553170	3	538,120,67,	0,683,1273,
#Deleted in new
chr6_GL000252v2_alt	2175065	2182776	chr6_GL000252v2_alt:2175065-2182776	0	+	2175065	2175065	8553170	19	1085,128,104,82,77,76,103,71,126,173,69,79,128,153,207,112,176,129,351,	0,1342,1586,1921,2318,2483,2842,3178,3369,3635,3959,4151,4357,4606,5607,6526,6796,7131,7360,
#Deleted in new
chr6_GL000252v2_alt	2176127	2182776	chr6_GL000252v2_alt:2176127-2182776	0	+	2176127	2176127	8553170	18	23,128,104,82,77,76,103,126,105,69,79,128,153,207,112,176,129,351,	0,280,524,859,1256,1421,1780,2307,2641,2897,3089,3295,3544,4545,5464,5734,6069,6298,
#Deleted in new
chr6_GL000252v2_alt	2178448	2181992	chr6_GL000252v2_alt:2178448-2181992	0	+	2178448	2178448	8553170	8	112,105,69,79,128,153,211,131,	0,320,576,768,974,1223,2224,3413,
#Deleted in new
chr6_GL000252v2_alt	2178901	2179824	chr6_GL000252v2_alt:2178901-2179824	0	+	2178901	2178901	8553170	4	192,79,128,153,	0,315,521,770,
#Deleted in new
chr6_GL000252v2_alt	2179526	2182776	chr6_GL000252v2_alt:2179526-2182776	0	+	2179526	2179526	8553170	6	24,1208,112,176,129,351,	0,145,2065,2335,2670,2899,
#Deleted in new
chr6_GL000252v2_alt	2187654	2188477	chr6_GL000252v2_alt:2187654-2188477	3	-	2187789	2188398	789624	3	222,89,140,	0,354,683,
#Deleted in new
chr6_GL000252v2_alt	2187654	2188411	chr6_GL000252v2_alt:2187654-2188411	0	-	2187654	2187654	8553170	2	222,403,	0,354,
#Deleted in new
chr6_GL000252v2_alt	2188920	2189012	chr6_GL000252v2_alt:2188920-2189012	3	-	2188920	2188920	8553170	1	92,	0,
#Deleted in new
chr6_GL000252v2_alt	2197307	2209559	chr6_GL000252v2_alt:2197307-2209559	3	+	2197307	2209424	789624	4	82,864,461,282,	0,7546,11038,11970,
#Deleted in new
chr6_GL000252v2_alt	2202285	2211168	chr6_GL000252v2_alt:2202285-2211168	3	-	2202285	2202285	8553170	3	381,138,86,	0,7088,8797,
#Deleted in new
chr6_GL000252v2_alt	2207429	2210527	chr6_GL000252v2_alt:2207429-2210527	0	+	2207429	2209424	789624	2	1377,1250,	0,1848,
#Deleted in new
chr6_GL000252v2_alt	2240020	2246201	chr6_GL000252v2_alt:2240020-2246201	3	+	2240261	2244492	789624	3	302,1445,1904,	0,2514,4277,
#Deleted in new
chr6_GL000252v2_alt	2240020	2242687	chr6_GL000252v2_alt:2240020-2242687	0	+	2240020	2240020	8553170	2	444,153,	0,2514,
#Deleted in new
chr6_GL000252v2_alt	2286554	2291354	chr6_GL000252v2_alt:2286554-2291354	3	+	2286554	2286554	8553170	3	189,386,37,	0,2287,4763,
#Deleted in new
chr6_GL000252v2_alt	2312820	2319262	chr6_GL000252v2_alt:2312820-2319262	7	+	2312820	2312820	16724991	4	82,417,693,483,	0,650,2769,5959,
#Deleted in new
chr6_GL000252v2_alt	2313577	2319248	chr6_GL000252v2_alt:2313577-2319248	4	+	2313577	2313577	16724991	3	310,1202,469,	0,1503,5202,
#Deleted in new
chr6_GL000252v2_alt	2313700	2316162	chr6_GL000252v2_alt:2313700-2316162	5	+	2313700	2313700	16724991	2	187,573,	0,1889,
#Deleted in new
chr6_GL000252v2_alt	2342380	2342480	chr6_GL000252v2_alt:2342380-2342480	3	+	2342380	2342380	8553170	1	100,	0,
#Deleted in new
chr6_GL000252v2_alt	2370586	2371923	chr6_GL000252v2_alt:2370586-2371923	3	-	2370744	2371919	789624	2	1069,71,	0,1266,
#Deleted in new
chr6_GL000252v2_alt	2374113	2378181	chr6_GL000252v2_alt:2374113-2378181	0	+	2374113	2374113	8553170	2	142,3682,	0,386,
#Deleted in new
chr6_GL000252v2_alt	2374188	2376660	chr6_GL000252v2_alt:2374188-2376660	0	+	2374188	2374188	8553170	2	67,210,	0,2262,
#Deleted in new
chr6_GL000252v2_alt	2374194	2399368	chr6_GL000252v2_alt:2374194-2399368	3	+	2388990	2399262	789624	6	61,164,77,30,124,398,	0,10843,14732,23565,23791,24776,
#Deleted in new
chr6_GL000252v2_alt	2374194	2399368	chr6_GL000252v2_alt:2374194-2399368	0	+	2374194	2374194	8553170	2	61,398,	0,24776,
#Deleted in new
chr6_GL000252v2_alt	2374453	2379793	chr6_GL000252v2_alt:2374453-2379793	3	-	2375385	2379779	789624	2	2437,99,	0,5241,
#Deleted in new
chr6_GL000252v2_alt	2396863	2398680	chr6_GL000252v2_alt:2396863-2398680	3	-	2397280	2398356	789624	2	773,379,	0,1438,
#Deleted in new
chr6_GL000252v2_alt	2397688	2399368	chr6_GL000252v2_alt:2397688-2399368	0	+	2397688	2397688	8553170	2	101,398,	0,1282,
#Deleted in new
chr6_GL000252v2_alt	2397749	2399367	chr6_GL000252v2_alt:2397749-2399367	1	+	2397749	2399262	789624	3	40,124,397,	0,236,1221,
#Deleted in new
chr6_GL000252v2_alt	2400053	2400240	chr6_GL000252v2_alt:2400053-2400240	7	+	2400053	2400053	16724991	1	187,	0,
#Deleted in new
chr6_GL000252v2_alt	2401760	2417533	chr6_GL000252v2_alt:2401760-2417533	3	-	2401913	2416354	789624	18	278,172,152,102,189,137,46,113,107,111,150,111,136,164,304,214,67,47,	0,524,823,2248,2446,2727,3009,3257,5953,6166,7613,8002,8272,8506,12038,14286,14578,15726,
#Deleted in new
chr6_GL000252v2_alt	2401760	2417109	chr6_GL000252v2_alt:2401760-2417109	1	-	2401913	2416354	789624	18	278,172,152,102,189,137,46,113,107,111,150,111,136,164,304,214,67,405,	0,524,823,2248,2446,2727,3009,3257,5953,6166,7613,8002,8272,8506,12038,14286,14578,14944,
#Deleted in new
chr6_GL000252v2_alt	2401760	2417521	chr6_GL000252v2_alt:2401760-2417521	1	-	2401913	2416354	789624	16	278,172,152,102,189,137,107,111,150,111,136,164,304,214,133,35,	0,524,823,2248,2446,2727,5953,6166,7613,8002,8272,8506,12038,14286,14578,15726,
#Deleted in new
chr6_GL000252v2_alt	2401760	2404558	chr6_GL000252v2_alt:2401760-2404558	0	-	2401913	2404558	789624	6	278,130,152,102,189,71,	0,524,823,2248,2446,2727,
#Deleted in new
chr6_GL000252v2_alt	2401761	2417109	chr6_GL000252v2_alt:2401761-2417109	1	-	2401913	2416920	789624	19	277,172,152,102,189,137,46,113,107,111,150,111,136,164,304,214,49,15,405,	0,523,822,2247,2445,2726,3008,3256,5952,6165,7612,8001,8271,8505,12037,14285,14577,14629,14943,
#Deleted in new
chr6_GL000252v2_alt	2402381	2404624	chr6_GL000252v2_alt:2402381-2404624	0	-	2402381	2402381	8553170	3	75,387,115,	0,1627,2128,
#Deleted in new
chr6_GL000252v2_alt	2402417	2404437	chr6_GL000252v2_alt:2402417-2404437	0	-	2402417	2402417	8553170	4	39,152,160,231,	0,166,1533,1789,
#Deleted in new
chr6_GL000252v2_alt	2408467	2417511	chr6_GL000252v2_alt:2408467-2417511	0	-	2408467	2408467	8553170	3	509,67,25,	0,7871,9019,
#Deleted in new
chr6_GL000252v2_alt	2409412	2416406	chr6_GL000252v2_alt:2409412-2416406	0	-	2409412	2416354	789624	7	111,111,136,164,304,106,68,	0,350,620,854,4386,6634,6926,
#Deleted in new
chr6_GL000252v2_alt	2410174	2414054	chr6_GL000252v2_alt:2410174-2414054	0	-	2410174	2410174	8553170	2	256,256,	0,3624,
#Deleted in new
chr6_GL000252v2_alt	2410399	2417402	chr6_GL000252v2_alt:2410399-2417402	0	-	2410399	2416354	789624	5	31,304,214,67,84,	0,3399,5647,5939,6919,
#Deleted in new
chr6_GL000252v2_alt	2413874	2417507	chr6_GL000252v2_alt:2413874-2417507	0	-	2413874	2416354	789624	5	228,214,67,116,21,	0,2172,2464,2830,3612,
#Deleted in new
chr6_GL000252v2_alt	2413896	2417389	chr6_GL000252v2_alt:2413896-2417389	0	-	2413896	2416354	789624	4	206,359,116,59,	0,2150,2808,3434,
#Deleted in new
chr6_GL000252v2_alt	2413976	2417108	chr6_GL000252v2_alt:2413976-2417108	0	-	2413976	2416354	789624	4	126,214,67,431,	0,2070,2362,2701,
#Deleted in new
chr6_GL000252v2_alt	2414030	2417525	chr6_GL000252v2_alt:2414030-2417525	0	-	2414030	2416354	789624	3	72,359,39,	0,2016,3456,
#Deleted in new
chr6_GL000252v2_alt	2415547	2416405	chr6_GL000252v2_alt:2415547-2416405	0	-	2415547	2415547	8553170	2	713,67,	0,791,
#Deleted in new
chr6_GL000252v2_alt	2416074	2417092	chr6_GL000252v2_alt:2416074-2417092	0	-	2416074	2416074	8553170	3	186,133,388,	0,264,630,
#Deleted in new
chr6_GL000252v2_alt	2417861	2423531	chr6_GL000252v2_alt:2417861-2423531	3	+	2418789	2422032	789624	4	181,811,559,1740,	0,355,2900,3930,
#Deleted in new
chr6_GL000252v2_alt	2417866	2423531	chr6_GL000252v2_alt:2417866-2423531	1	+	2418789	2422032	789624	4	176,565,559,1740,	0,596,2895,3925,
#Deleted in new
chr6_GL000252v2_alt	2420798	2422322	chr6_GL000252v2_alt:2420798-2422322	0	+	2420798	2420798	8553170	3	94,255,531,	0,267,993,
#Deleted in new
chr6_GL000252v2_alt	2423652	2425594	chr6_GL000252v2_alt:2423652-2425594	1	-	2423916	2425493	789624	4	531,159,131,342,	0,793,1236,1600,
#Deleted in new
chr6_GL000252v2_alt	2423652	2430027	chr6_GL000252v2_alt:2423652-2430027	3	-	2423916	2429954	789624	5	531,159,131,121,478,	0,793,1236,1600,5897,
#Deleted in new
chr6_GL000252v2_alt	2423652	2424610	chr6_GL000252v2_alt:2423652-2424610	0	-	2423652	2423652	8553170	2	531,165,	0,793,
#Deleted in new
chr6_GL000252v2_alt	2425017	2429992	chr6_GL000252v2_alt:2425017-2429992	0	-	2425017	2425017	8553170	2	356,443,	0,4532,
#Deleted in new
chr6_GL000252v2_alt	2433067	2437233	chr6_GL000252v2_alt:2433067-2437233	3	-	2433067	2433067	789624	3	299,33,261,	0,503,3905,
#Deleted in new
chr6_GL000252v2_alt	2457091	2463297	chr6_GL000252v2_alt:2457091-2463297	3	+	2457091	2457091	789624	2	123,1597,	0,4609,
#Deleted in new
chr6_GL000252v2_alt	2457469	2462551	chr6_GL000252v2_alt:2457469-2462551	0	+	2457469	2457469	8553170	2	44,851,	0,4231,
#Deleted in new
chr6_GL000252v2_alt	2459496	2461249	chr6_GL000252v2_alt:2459496-2461249	3	-	2459496	2459496	8553170	2	474,42,	0,1711,
#Deleted in new
chr6_GL000252v2_alt	2461341	2462330	chr6_GL000252v2_alt:2461341-2462330	0	+	2461341	2461341	8553170	2	41,630,	0,359,
#Deleted in new
chr6_GL000252v2_alt	2526548	2529920	chr6_GL000252v2_alt:2526548-2529920	1	-	2526966	2529861	0	8	423,48,33,120,276,276,270,132,	0,587,742,1214,1455,2318,2840,3240,
#Deleted in new
chr6_GL000252v2_alt	2526548	2529876	chr6_GL000252v2_alt:2526548-2529876	1	-	2526869	2529861	789624	7	423,48,149,276,276,270,88,	0,587,1185,1455,2318,2840,3240,
#Deleted in new
chr6_GL000252v2_alt	2526548	2529883	chr6_GL000252v2_alt:2526548-2529883	1	-	2526869	2529861	789624	6	413,120,276,276,270,95,	0,1214,1455,2318,2840,3240,
#Deleted in new
chr6_GL000252v2_alt	2526548	2529876	chr6_GL000252v2_alt:2526548-2529876	3	-	2526966	2529861	789624	8	423,48,51,120,276,276,270,88,	0,587,742,1214,1455,2318,2840,3240,
#Deleted in new
chr6_GL000252v2_alt	2526548	2527464	chr6_GL000252v2_alt:2526548-2527464	0	-	2526548	2526548	8553170	2	423,329,	0,587,
#Deleted in new
chr6_GL000252v2_alt	2526548	2528216	chr6_GL000252v2_alt:2526548-2528216	0	-	2526548	2526548	8553170	4	423,48,592,213,	0,587,742,1455,
#Deleted in new
chr6_GL000252v2_alt	2526548	2529895	chr6_GL000252v2_alt:2526548-2529895	0	-	2529072	2529861	789624	8	423,48,33,120,276,259,270,107,	0,587,742,1214,1455,2318,2840,3240,
#Deleted in new
chr6_GL000252v2_alt	2526548	2529840	chr6_GL000252v2_alt:2526548-2529840	0	-	2526548	2526548	8553170	6	423,48,33,120,276,974,	0,587,742,1214,1455,2318,
#Deleted in new
chr6_GL000252v2_alt	2527136	2529861	chr6_GL000252v2_alt:2527136-2529861	1	-	2527136	2529122	789624	8	47,33,120,276,276,100,51,73,	0,154,626,867,1730,2252,2471,2652,
#Deleted in new
chr6_GL000252v2_alt	2527136	2529861	chr6_GL000252v2_alt:2527136-2529861	1	-	2527136	2529861	789624	6	49,31,276,276,272,71,	0,156,867,1730,2252,2654,
#Deleted in new
chr6_GL000252v2_alt	2528003	2529863	chr6_GL000252v2_alt:2528003-2529863	0	-	2528003	2528003	8553170	5	276,69,276,270,75,	0,422,863,1385,1785,
#Deleted in new
chr6_GL000252v2_alt	2528007	2529859	chr6_GL000252v2_alt:2528007-2529859	0	-	2528007	2529859	789624	5	118,47,276,270,71,	0,225,859,1381,1781,
#Deleted in new
chr6_GL000252v2_alt	2528014	2529920	chr6_GL000252v2_alt:2528014-2529920	0	-	2528014	2528014	8553170	3	265,276,532,	0,852,1374,
#Deleted in new
chr6_GL000252v2_alt	2528892	2529880	chr6_GL000252v2_alt:2528892-2529880	0	-	2528892	2528892	8553170	2	766,92,	0,896,
#Deleted in new
chr6_GL000252v2_alt	2533328	2536501	chr6_GL000252v2_alt:2533328-2536501	7	+	2533328	2533328	16724991	1	3173,	0,
#Deleted in new
chr6_GL000252v2_alt	2538056	2539259	chr6_GL000252v2_alt:2538056-2539259	7	+	2538056	2538056	16724991	1	1203,	0,
#Deleted in new
chr6_GL000252v2_alt	2545249	2546704	chr6_GL000252v2_alt:2545249-2546704	7	-	2545249	2545249	16724991	1	1455,	0,
#Deleted in new
chr6_GL000252v2_alt	2565548	2566283	chr6_GL000252v2_alt:2565548-2566283	7	-	2565548	2565548	16724991	2	233,73,	0,662,
#Deleted in new
chr6_GL000252v2_alt	2744296	2744398	chr6_GL000252v2_alt:2744296-2744398	3	-	2744296	2744296	8553170	1	102,	0,
#Deleted in new
chr6_GL000252v2_alt	2745693	2758910	chr6_GL000252v2_alt:2745693-2758910	3	+	2745801	2757695	789624	6	178,255,159,279,132,1343,	0,7711,8366,9116,9494,11874,
#Deleted in new
chr6_GL000252v2_alt	2745722	2758910	chr6_GL000252v2_alt:2745722-2758910	1	+	2745801	2757695	789624	6	149,255,288,279,132,1343,	0,7682,8208,9087,9465,11845,
#Deleted in new
chr6_GL000252v2_alt	2753722	2755319	chr6_GL000252v2_alt:2753722-2755319	0	+	2753722	2753722	8553170	3	496,279,132,	0,1087,1465,
#Deleted in new
chr6_GL000252v2_alt	2767268	2768080	chr6_GL000252v2_alt:2767268-2768080	7	-	2767268	2767268	16724991	2	171,327,	0,485,
#Deleted in new
chr6_GL000252v2_alt	2775886	2776466	chr6_GL000252v2_alt:2775886-2776466	7	+	2775886	2775886	16724991	1	580,	0,
#Deleted in new
chr6_GL000252v2_alt	2776489	2778005	chr6_GL000252v2_alt:2776489-2778005	3	+	2776787	2777708	789624	2	469,486,	0,1030,
#Deleted in new
chr6_GL000252v2_alt	2777991	2790218	chr6_GL000252v2_alt:2777991-2790218	1	-	2778206	2788302	0	11	232,148,145,110,132,119,184,93,128,213,499,	0,559,833,1076,2560,5147,6280,8543,8927,10100,11728,
#Deleted in new
chr6_GL000252v2_alt	2777991	2790218	chr6_GL000252v2_alt:2777991-2790218	1	-	2778206	2788302	0	11	232,148,145,110,132,119,184,93,128,343,499,	0,559,833,1076,2560,5147,6280,8543,8927,10100,11728,
#Deleted in new
chr6_GL000252v2_alt	2777991	2788306	chr6_GL000252v2_alt:2777991-2788306	1	-	2778565	2788302	789624	10	232,171,145,110,132,119,184,93,128,215,	0,559,833,1076,2560,5147,6280,8543,8927,10100,
#Deleted in new
chr6_GL000252v2_alt	2777991	2794348	chr6_GL000252v2_alt:2777991-2794348	1	-	2778206	2788302	0	13	232,148,145,110,132,119,184,93,128,343,199,101,105,	0,559,833,1076,2560,5147,6280,8543,8927,10100,11728,15887,16252,
#Deleted in new
chr6_GL000252v2_alt	2777991	2789787	chr6_GL000252v2_alt:2777991-2789787	0	-	2777991	2777991	8553170	10	232,148,145,110,2706,184,93,128,213,68,	0,559,833,1076,2560,6280,8543,8927,10100,11728,
#Deleted in new
chr6_GL000252v2_alt	2777991	2779516	chr6_GL000252v2_alt:2777991-2779516	0	-	2777991	2777991	8553170	4	232,148,145,449,	0,559,833,1076,
#Deleted in new
chr6_GL000252v2_alt	2777991	2783247	chr6_GL000252v2_alt:2777991-2783247	0	-	2778877	2783247	789624	6	232,148,126,110,132,109,	0,559,833,1076,2560,5147,
#Deleted in new
chr6_GL000252v2_alt	2778015	2778707	chr6_GL000252v2_alt:2778015-2778707	0	-	2778015	2778015	8553170	2	506,111,	0,581,
#Deleted in new
chr6_GL000252v2_alt	2778550	2782283	chr6_GL000252v2_alt:2778550-2782283	2	-	2778550	2782283	789624	5	148,145,110,132,26,	0,274,517,2001,3707,
#Deleted in new
chr6_GL000252v2_alt	2778887	2779443	chr6_GL000252v2_alt:2778887-2779443	0	-	2778887	2778887	8553170	2	63,376,	0,180,
#Deleted in new
chr6_GL000252v2_alt	2779045	2790171	chr6_GL000252v2_alt:2779045-2790171	0	-	2779045	2779045	8553170	6	132,132,119,184,213,452,	0,1506,4093,5226,9046,10674,
#Deleted in new
chr6_GL000252v2_alt	2779073	2789751	chr6_GL000252v2_alt:2779073-2789751	0	-	2779073	2788289	789624	6	104,132,119,184,343,32,	0,1478,4065,5198,9018,10646,
#Deleted in new
chr6_GL000252v2_alt	2780184	2789771	chr6_GL000252v2_alt:2780184-2789771	0	-	2780184	2780184	8553170	5	3073,184,93,128,1680,	0,4087,6350,6734,7907,
#Deleted in new
chr6_GL000252v2_alt	2780551	2789301	chr6_GL000252v2_alt:2780551-2789301	0	-	2780551	2788302	789624	7	132,119,184,93,128,213,136,	0,2587,3720,5983,6367,7540,8614,
#Deleted in new
chr6_GL000252v2_alt	2783159	2789788	chr6_GL000252v2_alt:2783159-2789788	0	-	2783159	2788302	789624	6	98,184,93,128,245,69,	0,1112,3375,3759,4932,6560,
#Deleted in new
chr6_GL000252v2_alt	2783166	2789254	chr6_GL000252v2_alt:2783166-2789254	0	-	2783166	2788302	789624	6	91,184,93,128,343,89,	0,1105,3368,3752,4925,5999,
#Deleted in new
chr6_GL000252v2_alt	2783178	2789707	chr6_GL000252v2_alt:2783178-2789707	0	-	2783178	2788302	789624	6	79,184,93,128,343,105,	0,1093,3356,3740,4913,6424,
#Deleted in new
chr6_GL000252v2_alt	2784145	2784221	chr6_GL000252v2_alt:2784145-2784221	3	-	2784145	2784145	789624	1	76,	0,
#Deleted in new
chr6_GL000252v2_alt	2784380	2789759	chr6_GL000252v2_alt:2784380-2789759	0	-	2784380	2788302	789624	5	75,177,128,213,40,	0,2154,2538,3711,5339,
#Deleted in new
chr6_GL000252v2_alt	2784394	2789499	chr6_GL000252v2_alt:2784394-2789499	0	-	2784394	2789470	789624	5	61,93,128,213,96,	0,2140,2524,3697,5009,
#Deleted in new
chr6_GL000252v2_alt	2786590	2789756	chr6_GL000252v2_alt:2786590-2789756	0	-	2786590	2788302	789624	5	37,128,343,175,37,	0,328,1501,2332,3129,
#Deleted in new
chr6_GL000252v2_alt	2786602	2789761	chr6_GL000252v2_alt:2786602-2789761	0	-	2786602	2788965	789624	5	25,128,213,175,42,	0,316,1489,2320,3117,
#Deleted in new
chr6_GL000252v2_alt	2786653	2789773	chr6_GL000252v2_alt:2786653-2789773	0	-	2786653	2788302	789624	4	58,128,343,54,	0,265,1438,3066,
#Deleted in new
chr6_GL000252v2_alt	2786970	2789643	chr6_GL000252v2_alt:2786970-2789643	0	-	2786970	2788302	789624	3	76,343,240,	0,1121,2433,
#Deleted in new
chr6_GL000252v2_alt	2788870	2788948	chr6_GL000252v2_alt:2788870-2788948	3	-	2788870	2788870	789624	1	78,	0,
#Deleted in new
chr6_GL000252v2_alt	2790073	2790897	chr6_GL000252v2_alt:2790073-2790897	3	+	2790073	2790073	789624	2	93,423,	0,401,
#Deleted in new
chr6_GL000252v2_alt	2790142	2790908	chr6_GL000252v2_alt:2790142-2790908	0	+	2790142	2790142	8553170	2	24,430,	0,336,
#Deleted in new
chr6_GL000252v2_alt	2792231	2794403	chr6_GL000252v2_alt:2792231-2794403	3	-	2793177	2794325	789624	3	1078,23,160,	0,1725,2012,
#Deleted in new
chr6_GL000252v2_alt	2792231	2794373	chr6_GL000252v2_alt:2792231-2794373	1	-	2793177	2794325	789624	3	1120,101,130,	0,1647,2012,
#Deleted in new
chr6_GL000252v2_alt	2793053	2794521	chr6_GL000252v2_alt:2793053-2794521	0	-	2793053	2793053	8553170	3	298,161,124,	0,765,1344,
#Deleted in new
chr6_GL000252v2_alt	2793186	2794614	chr6_GL000252v2_alt:2793186-2794614	0	-	2793186	2793186	8553170	3	165,101,217,	0,692,1211,
#Deleted in new
chr6_GL000252v2_alt	2794635	2806586	chr6_GL000252v2_alt:2794635-2806586	0	+	2795939	2806368	789624	4	104,277,222,808,	0,1292,10749,11143,
#Deleted in new
chr6_GL000252v2_alt	2795345	2806586	chr6_GL000252v2_alt:2795345-2806586	3	+	2795459	2806368	789624	4	171,277,222,808,	0,582,10039,10433,
#Deleted in new
chr6_GL000252v2_alt	2795377	2806586	chr6_GL000252v2_alt:2795377-2806586	1	+	2795459	2806368	789624	4	139,277,177,808,	0,550,10007,10401,
#Deleted in new
chr6_GL000252v2_alt	2795404	2805462	chr6_GL000252v2_alt:2795404-2805462	0	+	2795404	2795404	8553170	4	112,277,87,78,	0,523,9050,9980,
#Deleted in new
chr6_GL000252v2_alt	2795425	2805716	chr6_GL000252v2_alt:2795425-2805716	0	+	2795425	2795425	8553170	3	91,277,332,	0,502,9959,
#Deleted in new
chr6_GL000252v2_alt	2819784	2822057	chr6_GL000252v2_alt:2819784-2822057	1	+	2820475	2821426	789624	4	249,108,106,1044,	0,682,876,1229,
#Deleted in new
chr6_GL000252v2_alt	2820000	2822057	chr6_GL000252v2_alt:2820000-2822057	0	+	2820000	2820000	8553170	3	33,300,1044,	0,466,1013,
#Deleted in new
chr6_GL000252v2_alt	2820013	2822057	chr6_GL000252v2_alt:2820013-2822057	3	+	2820475	2821426	789624	4	164,108,106,1044,	0,453,647,1000,
#Deleted in new
chr6_GL000252v2_alt	2820024	2822057	chr6_GL000252v2_alt:2820024-2822057	0	+	2820024	2820024	8553170	3	153,300,1044,	0,442,989,
#Deleted in new
chr6_GL000252v2_alt	2823299	2826069	chr6_GL000252v2_alt:2823299-2826069	3	+	2823474	2825270	0	4	361,46,48,1221,	0,967,1200,1549,
#Deleted in new
chr6_GL000252v2_alt	2828287	2830158	chr6_GL000252v2_alt:2828287-2830158	3	-	2828441	2830150	0	4	609,72,46,170,	0,1004,1259,1701,
#Deleted in new
chr6_GL000252v2_alt	2828287	2830255	chr6_GL000252v2_alt:2828287-2830255	0	-	2828287	2828287	8553170	3	609,72,27,	0,1004,1941,
#Deleted in new
chr6_GL000252v2_alt	2828287	2830160	chr6_GL000252v2_alt:2828287-2830160	0	-	2828287	2828287	8553170	3	609,72,172,	0,1004,1701,
#Deleted in new
chr6_GL000252v2_alt	2833858	2836646	chr6_GL000252v2_alt:2833858-2836646	3	+	2835034	2836413	789624	4	192,119,23,392,	0,1076,1820,2396,
#Deleted in new
chr6_GL000252v2_alt	2833913	2836646	chr6_GL000252v2_alt:2833913-2836646	1	+	2835034	2836413	789624	5	137,119,93,23,392,	0,1021,1462,1765,2341,
#Deleted in new
chr6_GL000252v2_alt	2833928	2836646	chr6_GL000252v2_alt:2833928-2836646	0	+	2833928	2833928	8553170	2	122,1712,	0,1006,
#Deleted in new
chr6_GL000252v2_alt	2833951	2836646	chr6_GL000252v2_alt:2833951-2836646	1	+	2835034	2836322	789624	3	99,119,392,	0,983,2303,
#Deleted in new
chr6_GL000252v2_alt	2833951	2836646	chr6_GL000252v2_alt:2833951-2836646	1	+	2835034	2836322	789624	3	99,119,347,	0,983,2348,
#Deleted in new
chr6_GL000252v2_alt	2833954	2836646	chr6_GL000252v2_alt:2833954-2836646	1	+	2835034	2836413	789624	4	96,119,23,347,	0,980,1724,2345,
#Deleted in new
chr6_GL000252v2_alt	2833969	2836646	chr6_GL000252v2_alt:2833969-2836646	0	+	2833969	2833969	8553170	3	81,123,1361,	0,965,1316,
#Deleted in new
chr6_GL000252v2_alt	2834433	2836646	chr6_GL000252v2_alt:2834433-2836646	1	+	2835034	2836322	789624	4	109,119,93,413,	0,501,942,1800,
#Deleted in new
chr6_GL000252v2_alt	2834582	2836646	chr6_GL000252v2_alt:2834582-2836646	1	+	2835034	2836322	789624	3	92,119,392,	0,352,1672,
#Deleted in new
chr6_GL000252v2_alt	2834629	2835465	chr6_GL000252v2_alt:2834629-2835465	0	+	2835034	2835465	789624	3	45,119,90,	0,305,746,
#Deleted in new
chr6_GL000252v2_alt	2834743	2836646	chr6_GL000252v2_alt:2834743-2836646	1	+	2835034	2836322	789624	3	108,119,392,	0,191,1511,
#Deleted in new
chr6_GL000252v2_alt	2834756	2836646	chr6_GL000252v2_alt:2834756-2836646	1	+	2835034	2836322	789624	2	297,392,	0,1498,
#Deleted in new
chr6_GL000252v2_alt	2834766	2836646	chr6_GL000252v2_alt:2834766-2836646	1	+	2835034	2836413	789624	5	85,119,93,23,392,	0,168,609,912,1488,
#Deleted in new
chr6_GL000252v2_alt	2834800	2836646	chr6_GL000252v2_alt:2834800-2836646	1	+	2835034	2836413	789624	3	253,23,392,	0,878,1454,
#Deleted in new
chr6_GL000252v2_alt	2834814	2836646	chr6_GL000252v2_alt:2834814-2836646	1	+	2835034	2836413	789624	4	37,119,23,392,	0,120,864,1440,
#Deleted in new
chr6_GL000252v2_alt	2834820	2835576	chr6_GL000252v2_alt:2834820-2835576	0	+	2835034	2835576	789624	4	21,119,93,26,	0,114,555,730,
#Deleted in new
chr6_GL000252v2_alt	2834831	2836646	chr6_GL000252v2_alt:2834831-2836646	1	+	2835034	2836322	789624	4	20,119,93,392,	0,103,544,1423,
#Deleted in new
chr6_GL000252v2_alt	2834851	2836646	chr6_GL000252v2_alt:2834851-2836646	1	+	2835034	2836413	789624	4	202,93,23,347,	0,524,827,1448,
#Deleted in new
chr6_GL000252v2_alt	2834934	2836646	chr6_GL000252v2_alt:2834934-2836646	1	+	2835034	2836322	789624	2	119,413,	0,1299,
#Deleted in new
chr6_GL000252v2_alt	2834934	2836646	chr6_GL000252v2_alt:2834934-2836646	1	+	2835034	2836413	789624	4	119,93,23,413,	0,441,744,1299,
#Deleted in new
chr6_GL000252v2_alt	2834934	2836646	chr6_GL000252v2_alt:2834934-2836646	1	+	2835034	2836413	789624	3	119,23,413,	0,744,1299,
#Deleted in new
chr6_GL000252v2_alt	2834989	2836646	chr6_GL000252v2_alt:2834989-2836646	0	+	2834989	2834989	8553170	3	64,151,392,	0,561,1265,
#Deleted in new
chr6_GL000252v2_alt	2835038	2836646	chr6_GL000252v2_alt:2835038-2836646	0	+	2835038	2836322	789624	3	15,93,347,	0,337,1261,
#Deleted in new
chr6_GL000252v2_alt	2836631	2840722	chr6_GL000252v2_alt:2836631-2840722	1	-	2836803	2840458	0	4	282,108,345,307,	0,631,887,3784,
#Deleted in new
chr6_GL000252v2_alt	2836631	2840722	chr6_GL000252v2_alt:2836631-2840722	3	-	2836930	2840458	0	4	337,108,345,307,	0,631,887,3784,
#Deleted in new
chr6_GL000252v2_alt	2836631	2840696	chr6_GL000252v2_alt:2836631-2840696	0	-	2836631	2836631	8553170	4	337,108,345,103,	0,631,887,3962,
#Deleted in new
chr6_GL000252v2_alt	2836631	2840549	chr6_GL000252v2_alt:2836631-2840549	0	-	2836631	2836631	8553170	4	337,108,118,22,	0,631,887,3896,
#Deleted in new
chr6_GL000252v2_alt	2837010	2840722	chr6_GL000252v2_alt:2837010-2840722	1	-	2837048	2840458	0	4	115,108,345,307,	0,252,508,3405,
#Deleted in new
chr6_GL000252v2_alt	2837033	2840486	chr6_GL000252v2_alt:2837033-2840486	1	-	2837048	2840458	0	5	92,108,118,152,71,	0,229,485,678,3382,
#Deleted in new
chr6_GL000252v2_alt	2837033	2840486	chr6_GL000252v2_alt:2837033-2840486	0	-	2837355	2840458	789624	4	92,108,290,71,	0,229,540,3382,
#Deleted in new
chr6_GL000252v2_alt	2858853	2859127	chr6_GL000252v2_alt:2858853-2859127	7	-	2858853	2858853	16724991	1	274,	0,
#Deleted in new
chr6_GL000252v2_alt	2862950	2864788	chr6_GL000252v2_alt:2862950-2864788	3	+	2863096	2864667	0	6	171,62,67,42,163,206,	0,337,486,920,1160,1632,
#Deleted in new
chr6_GL000252v2_alt	2862983	2864107	chr6_GL000252v2_alt:2862983-2864107	0	+	2862983	2862983	8553170	3	77,62,671,	0,304,453,
#Deleted in new
chr6_GL000252v2_alt	2862993	2864788	chr6_GL000252v2_alt:2862993-2864788	0	+	2862993	2864667	789624	6	67,62,67,42,163,206,	0,294,443,877,1117,1589,
#Deleted in new
chr6_GL000252v2_alt	2863046	2864788	chr6_GL000252v2_alt:2863046-2864788	0	+	2863046	2863046	8553170	4	75,62,837,206,	0,241,390,1536,
#Deleted in new
chr6_GL000252v2_alt	2863392	2864788	chr6_GL000252v2_alt:2863392-2864788	0	+	2863392	2863392	8553170	3	111,163,206,	0,718,1190,
#Deleted in new
chr6_GL000252v2_alt	2863757	2864788	chr6_GL000252v2_alt:2863757-2864788	1	+	2863878	2864667	0	3	155,163,206,	0,353,825,
#Deleted in new
chr6_GL000252v2_alt	2868483	2885535	chr6_GL000252v2_alt:2868483-2885535	1	+	2870556	2885350	789624	31	139,175,178,100,73,144,152,80,143,91,217,475,191,298,211,1854,269,131,130,86,225,141,72,168,83,211,99,213,95,91,326,	0,2010,3012,3541,3730,4451,4740,5072,5300,6052,6262,7045,8424,8828,9871,10419,12659,13139,13516,13752,14033,14412,14674,14862,15247,15489,15790,16013,16322,16514,16726,
#Deleted in new
chr6_GL000252v2_alt	2868487	2874626	chr6_GL000252v2_alt:2868487-2874626	0	+	2868487	2868487	8553170	8	135,100,73,144,152,80,143,91,	0,3537,3726,4447,4736,5068,5296,6048,
#Deleted in new
chr6_GL000252v2_alt	2868488	2885535	chr6_GL000252v2_alt:2868488-2885535	1	+	2870556	2885350	789624	31	134,212,178,100,73,144,152,80,143,91,217,475,191,298,211,1854,269,131,130,86,225,141,72,168,83,211,99,213,95,91,326,	0,1968,3007,3536,3725,4446,4735,5067,5295,6047,6257,7040,8419,8823,9866,10414,12654,13134,13511,13747,14028,14407,14669,14857,15242,15484,15785,16008,16317,16509,16721,
#Deleted in new
chr6_GL000252v2_alt	2870845	2870977	chr6_GL000252v2_alt:2870845-2870977	3	+	2870845	2870845	789624	1	132,	0,
#Deleted in new
chr6_GL000252v2_alt	2872665	2873261	chr6_GL000252v2_alt:2872665-2873261	0	+	2872665	2872665	8553170	2	413,38,	0,558,
#Deleted in new
chr6_GL000252v2_alt	2873517	2874838	chr6_GL000252v2_alt:2873517-2874838	2	+	2873517	2873517	8553170	3	409,91,93,	0,1018,1228,
#Deleted in new
chr6_GL000252v2_alt	2876403	2877532	chr6_GL000252v2_alt:2876403-2877532	0	+	2876403	2876403	8553170	2	695,221,	0,908,
#Deleted in new
chr6_GL000252v2_alt	2881717	2882520	chr6_GL000252v2_alt:2881717-2882520	0	+	2881717	2881717	8553170	2	412,285,	0,518,
#Deleted in new
chr6_GL000252v2_alt	2882170	2883080	chr6_GL000252v2_alt:2882170-2883080	0	+	2882170	2882170	8553170	2	571,185,	0,725,
#Deleted in new
chr6_GL000252v2_alt	2883005	2883473	chr6_GL000252v2_alt:2883005-2883473	0	+	2883005	2883005	8553170	2	31,316,	0,152,
#Deleted in new
chr6_GL000252v2_alt	2883123	2884014	chr6_GL000252v2_alt:2883123-2884014	0	+	2883123	2883123	8553170	2	690,42,	0,849,
#Deleted in new
chr6_GL000252v2_alt	2883139	2884575	chr6_GL000252v2_alt:2883139-2884575	0	+	2883139	2883139	8553170	4	90,468,211,302,	0,206,833,1134,
#Deleted in new
chr6_GL000252v2_alt	2884010	2885535	chr6_GL000252v2_alt:2884010-2885535	0	+	2884010	2884010	8553170	5	173,99,213,95,538,	0,263,486,795,987,
#Deleted in new
chr6_GL000252v2_alt	2884299	2885535	chr6_GL000252v2_alt:2884299-2885535	0	+	2884299	2884299	8553170	3	73,404,538,	0,197,698,
#Deleted in new
chr6_GL000252v2_alt	2884598	2885535	chr6_GL000252v2_alt:2884598-2885535	0	+	2884598	2884598	8553170	3	302,91,326,	0,399,611,
#Deleted in new
chr6_GL000252v2_alt	2886790	2900164	chr6_GL000252v2_alt:2886790-2900164	1	-	2886893	2899530	789624	25	199,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,151,	0,472,1171,1357,1617,1764,2076,2292,2511,2748,3084,3797,4865,5057,5500,5921,6382,7369,8567,9653,9887,10175,10486,12632,13223,
#Deleted in new
chr6_GL000252v2_alt	2886790	2888991	chr6_GL000252v2_alt:2886790-2888991	0	-	2886893	2888991	789624	6	199,108,144,60,147,125,	0,1171,1357,1617,1764,2076,
#Deleted in new
chr6_GL000252v2_alt	2886790	2900406	chr6_GL000252v2_alt:2886790-2900406	1	-	2886893	2899530	789624	25	199,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,254,75,54,197,118,121,236,	0,472,1171,1357,1617,1764,2076,2292,2511,2748,3084,3797,4865,5057,5500,5921,6382,7369,8567,9653,9887,10175,10486,12632,13380,
#Deleted in new
chr6_GL000252v2_alt	2886790	2900476	chr6_GL000252v2_alt:2886790-2900476	1	-	2886893	2899530	789624	25	199,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,282,	0,472,1171,1357,1617,1764,2076,2292,2511,2748,3084,3797,4865,5057,5500,5921,6382,7369,8567,9653,9887,10175,10486,12632,13404,
#Deleted in new
chr6_GL000252v2_alt	2886790	2888700	chr6_GL000252v2_alt:2886790-2888700	0	-	2886893	2888700	789624	4	199,108,60,146,	0,1171,1617,1764,
#Deleted in new
chr6_GL000252v2_alt	2886790	2887551	chr6_GL000252v2_alt:2886790-2887551	0	-	2886790	2886790	8553170	2	199,289,	0,472,
#Deleted in new
chr6_GL000252v2_alt	2886790	2888302	chr6_GL000252v2_alt:2886790-2888302	0	-	2886790	2886790	8553170	4	199,147,108,155,	0,472,1171,1357,
#Deleted in new
chr6_GL000252v2_alt	2886791	2900471	chr6_GL000252v2_alt:2886791-2900471	1	-	2886893	2899530	789624	24	198,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,277,	0,1170,1356,1616,1763,2075,2291,2510,2747,3083,3796,4864,5056,5499,5920,6381,7368,8566,9652,9886,10174,10485,12631,13403,
#Deleted in new
chr6_GL000252v2_alt	2886791	2900471	chr6_GL000252v2_alt:2886791-2900471	1	-	2886893	2899530	0	23	198,108,60,147,125,103,54,170,189,15,85,113,78,253,198,130,236,75,54,197,118,121,277,	0,1170,1616,1763,2075,2291,2510,2747,3083,4068,4864,5056,5499,5920,6381,7368,8566,9652,9886,10174,10485,12631,13403,
#Deleted in new
chr6_GL000252v2_alt	2888587	2889908	chr6_GL000252v2_alt:2888587-2889908	0	-	2888587	2888587	8553170	3	768,170,34,	0,951,1287,
#Deleted in new
chr6_GL000252v2_alt	2889610	2892082	chr6_GL000252v2_alt:2889610-2892082	0	-	2889610	2889610	8553170	5	98,292,287,88,235,	0,264,977,2045,2237,
#Deleted in new
chr6_GL000252v2_alt	2889981	2900449	chr6_GL000252v2_alt:2889981-2900449	0	-	2889981	2899530	789624	16	185,287,88,113,108,78,253,198,130,236,75,54,197,118,121,166,	0,606,1674,1866,2091,2309,2730,3191,4178,5376,6462,6696,6984,7295,9441,10302,
#Deleted in new
chr6_GL000252v2_alt	2890442	2891966	chr6_GL000252v2_alt:2890442-2891966	0	-	2890442	2890442	8553170	3	432,88,119,	0,1213,1405,
#Deleted in new
chr6_GL000252v2_alt	2890590	2892835	chr6_GL000252v2_alt:2890590-2892835	0	-	2890590	2892835	789624	5	284,88,113,105,124,	0,1065,1257,1700,2121,
#Deleted in new
chr6_GL000252v2_alt	2890628	2893256	chr6_GL000252v2_alt:2890628-2893256	0	-	2890628	2893256	789624	7	246,88,113,78,96,31,84,	0,1027,1219,1662,2083,2305,2544,
#Deleted in new
chr6_GL000252v2_alt	2890717	2893327	chr6_GL000252v2_alt:2890717-2893327	0	-	2890717	2890717	8553170	4	157,88,253,155,	0,938,1994,2455,
#Deleted in new
chr6_GL000252v2_alt	2890871	2893269	chr6_GL000252v2_alt:2890871-2893269	0	-	2890871	2893269	789624	5	3,88,113,253,97,	0,784,976,1840,2301,
#Deleted in new
chr6_GL000252v2_alt	2892082	2900132	chr6_GL000252v2_alt:2892082-2900132	0	-	2892082	2899530	789624	12	98,78,253,198,130,236,75,54,197,118,121,131,	0,208,629,1090,2077,3275,4361,4595,4883,5194,7340,7919,
#Deleted in new
chr6_GL000252v2_alt	2892259	2892951	chr6_GL000252v2_alt:2892259-2892951	0	-	2892259	2892259	8553170	2	109,240,	0,452,
#Deleted in new
chr6_GL000252v2_alt	2895357	2899925	chr6_GL000252v2_alt:2895357-2899925	0	-	2895357	2899530	789624	7	236,75,54,197,118,121,79,	0,1086,1320,1608,1919,4065,4489,
#Deleted in new
chr6_GL000252v2_alt	2895357	2899687	chr6_GL000252v2_alt:2895357-2899687	0	-	2895357	2899530	789624	6	236,75,197,118,121,19,	0,1086,1608,1919,4065,4311,
#Deleted in new
chr6_GL000252v2_alt	2895357	2900125	chr6_GL000252v2_alt:2895357-2900125	0	-	2895357	2899530	789624	6	236,75,197,118,121,112,	0,1086,1608,1919,4065,4656,
#Deleted in new
chr6_GL000252v2_alt	2895359	2899920	chr6_GL000252v2_alt:2895359-2899920	0	-	2895359	2899530	789624	7	234,75,54,197,118,121,252,	0,1084,1318,1606,1917,4063,4309,
#Deleted in new
chr6_GL000252v2_alt	2895360	2900419	chr6_GL000252v2_alt:2895360-2900419	0	-	2895360	2899530	789624	6	233,75,197,118,121,249,	0,1083,1605,1916,4062,4810,
#Deleted in new
chr6_GL000252v2_alt	2895366	2899742	chr6_GL000252v2_alt:2895366-2899742	0	-	2895366	2899530	789624	7	227,75,54,197,118,121,110,	0,1077,1311,1599,1910,4056,4266,
#Deleted in new
chr6_GL000252v2_alt	2895370	2900438	chr6_GL000252v2_alt:2895370-2900438	0	-	2895370	2899530	789624	7	223,75,54,197,118,121,268,	0,1073,1307,1595,1906,4052,4800,
#Deleted in new
chr6_GL000252v2_alt	2895446	2900090	chr6_GL000252v2_alt:2895446-2900090	0	-	2895446	2899530	789624	6	147,75,197,118,121,89,	0,997,1519,1830,3976,4555,
#Deleted in new
chr6_GL000252v2_alt	2895465	2900416	chr6_GL000252v2_alt:2895465-2900416	0	-	2895465	2899530	789624	7	146,75,54,197,118,121,133,	0,978,1212,1500,1811,3957,4818,
#Deleted in new
chr6_GL000252v2_alt	2895472	2900216	chr6_GL000252v2_alt:2895472-2900216	0	-	2895472	2899530	789624	6	121,75,197,118,121,22,	0,971,1493,1804,3950,4722,
#Deleted in new
chr6_GL000252v2_alt	2895554	2899746	chr6_GL000252v2_alt:2895554-2899746	0	-	2895554	2899530	789624	6	39,75,54,197,118,324,	0,889,1123,1411,1722,3868,
#Deleted in new
chr6_GL000252v2_alt	2896494	2900089	chr6_GL000252v2_alt:2896494-2900089	0	-	2896494	2896494	8553170	6	24,54,219,118,121,76,	0,183,471,782,2928,3519,
#Deleted in new
chr6_GL000252v2_alt	2896678	2899882	chr6_GL000252v2_alt:2896678-2899882	2	-	2896678	2899530	789624	5	53,197,118,121,55,	0,287,598,2744,3149,
#Deleted in new
chr6_GL000252v2_alt	2896996	2900409	chr6_GL000252v2_alt:2896996-2900409	0	-	2896996	2896996	8553170	4	188,118,121,215,	0,280,2426,3198,
#Deleted in new
chr6_GL000252v2_alt	2900186	2905853	chr6_GL000252v2_alt:2900186-2905853	1	+	2904344	2905559	789624	5	136,155,74,99,458,	0,4056,4809,4964,5209,
#Deleted in new
chr6_GL000252v2_alt	2900187	2905981	chr6_GL000252v2_alt:2900187-2905981	3	+	2904344	2905860	0	6	135,155,74,99,99,147,	0,4055,4808,4963,5208,5647,
#Deleted in new
chr6_GL000252v2_alt	2903664	2905981	chr6_GL000252v2_alt:2903664-2905981	1	+	2903737	2905860	0	6	187,155,74,99,99,147,	0,578,1331,1486,1731,2170,
#Deleted in new
chr6_GL000252v2_alt	2906068	2908543	chr6_GL000252v2_alt:2906068-2908543	3	-	2906833	2907718	789624	1	2475,	0,
#Deleted in new
chr6_GL000252v2_alt	2906099	2908492	chr6_GL000252v2_alt:2906099-2908492	3	+	2906099	2906099	8553170	2	351,322,	0,2071,
#Deleted in new
chr6_GL000252v2_alt	2908999	2914055	chr6_GL000252v2_alt:2908999-2914055	3	-	2910036	2912249	789624	4	1482,725,163,424,	0,2624,3612,4632,
#Deleted in new
chr6_GL000252v2_alt	2909846	2913401	chr6_GL000252v2_alt:2909846-2913401	1	-	2910036	2912249	789624	4	635,728,163,72,	0,1777,2765,3483,
#Deleted in new
chr6_GL000252v2_alt	2909846	2913621	chr6_GL000252v2_alt:2909846-2913621	1	-	2910036	2912249	789624	4	635,725,163,277,	0,1777,2765,3498,
#Deleted in new
chr6_GL000252v2_alt	2909846	2913632	chr6_GL000252v2_alt:2909846-2913632	1	-	2910036	2912249	789624	4	635,728,163,288,	0,1777,2765,3498,
#Deleted in new
chr6_GL000252v2_alt	2909846	2913161	chr6_GL000252v2_alt:2909846-2913161	1	-	2910036	2912249	789624	3	635,725,550,	0,1777,2765,
#Deleted in new
chr6_GL000252v2_alt	2911058	2911172	chr6_GL000252v2_alt:2911058-2911172	3	+	2911058	2911058	8553170	1	114,	0,
#Deleted in new
chr6_GL000252v2_alt	2911653	2913568	chr6_GL000252v2_alt:2911653-2913568	0	-	2911653	2912249	789624	3	695,67,224,	0,958,1691,
#Deleted in new
chr6_GL000252v2_alt	2911755	2913213	chr6_GL000252v2_alt:2911755-2913213	0	-	2911755	2912249	789624	3	596,163,43,	0,856,1415,
#Deleted in new
chr6_GL000252v2_alt	2911793	2912961	chr6_GL000252v2_alt:2911793-2912961	0	-	2911793	2912249	789624	3	558,163,101,	0,818,1067,
#Deleted in new
chr6_GL000252v2_alt	2911928	2913605	chr6_GL000252v2_alt:2911928-2913605	0	-	2911928	2912249	789624	3	423,67,261,	0,683,1416,
#Deleted in new
chr6_GL000252v2_alt	2911980	2912956	chr6_GL000252v2_alt:2911980-2912956	0	-	2911980	2912249	789624	3	368,163,96,	0,631,880,
#Deleted in new
chr6_GL000252v2_alt	2913006	2917842	chr6_GL000252v2_alt:2913006-2917842	1	+	2913218	2917698	789624	7	258,83,103,116,76,190,235,	0,1586,2633,3304,3862,4084,4601,
#Deleted in new
chr6_GL000252v2_alt	2913650	2920054	chr6_GL000252v2_alt:2913650-2920054	1	+	2914603	2920054	789624	5	330,83,103,77,234,	0,942,1989,2660,6170,
#Deleted in new
chr6_GL000252v2_alt	2913650	2920054	chr6_GL000252v2_alt:2913650-2920054	3	+	2914603	2920054	789624	7	330,83,103,116,76,129,419,	0,942,1989,2660,3218,5277,5985,
#Deleted in new
chr6_GL000252v2_alt	2913835	2917842	chr6_GL000252v2_alt:2913835-2917842	1	+	2914603	2917698	0	7	145,83,103,116,76,190,235,	0,757,1804,2475,3033,3255,3772,
#Deleted in new
chr6_GL000252v2_alt	2913852	2918115	chr6_GL000252v2_alt:2913852-2918115	0	+	2913852	2913852	8553170	5	128,83,103,970,508,	0,740,1787,2458,3755,
#Deleted in new
chr6_GL000252v2_alt	2913858	2916013	chr6_GL000252v2_alt:2913858-2916013	0	+	2913858	2913858	8553170	3	122,83,374,	0,734,1781,
#Deleted in new
chr6_GL000252v2_alt	2913865	2917236	chr6_GL000252v2_alt:2913865-2917236	0	+	2913865	2913865	8553170	5	115,83,103,116,368,	0,727,1774,2445,3003,
#Deleted in new
chr6_GL000252v2_alt	2913869	2917842	chr6_GL000252v2_alt:2913869-2917842	0	+	2913869	2913869	8553170	7	111,83,121,116,76,190,235,	0,723,1752,2441,2999,3221,3738,
#Deleted in new
chr6_GL000252v2_alt	2913873	2920095	chr6_GL000252v2_alt:2913873-2920095	3	+	2914603	2919636	789624	8	107,83,103,116,76,190,129,460,	0,719,1766,2437,2995,3217,5054,5762,
#Deleted in new
chr6_GL000252v2_alt	2913873	2915602	chr6_GL000252v2_alt:2913873-2915602	0	+	2913873	2913873	8553170	2	107,1010,	0,719,
#Deleted in new
chr6_GL000252v2_alt	2914063	2917842	chr6_GL000252v2_alt:2914063-2917842	1	+	2914603	2917698	0	7	105,83,103,116,76,190,235,	0,529,1576,2247,2805,3027,3544,
#Deleted in new
chr6_GL000252v2_alt	2914126	2917842	chr6_GL000252v2_alt:2914126-2917842	1	+	2914603	2917698	0	7	133,83,103,116,76,190,235,	0,466,1513,2184,2742,2964,3481,
#Deleted in new
chr6_GL000252v2_alt	2914591	2920118	chr6_GL000252v2_alt:2914591-2920118	1	+	2914603	2919636	789624	7	84,103,116,76,190,129,483,	0,1048,1719,2277,2499,4336,5044,
#Deleted in new
chr6_GL000252v2_alt	2916889	2920222	chr6_GL000252v2_alt:2916889-2920222	0	+	2916889	2920054	789624	4	55,36,129,587,	0,1855,2038,2746,
#Deleted in new
chr6_GL000252v2_alt	2918150	2921318	chr6_GL000252v2_alt:2918150-2921318	2	+	2918150	2918150	8553170	2	906,1683,	0,1485,
#Deleted in new
chr6_GL000252v2_alt	2918722	2921318	chr6_GL000252v2_alt:2918722-2921318	1	+	2918722	2920054	789624	3	58,129,1683,	0,205,913,
#Deleted in new
chr6_GL000252v2_alt	2920152	2921548	chr6_GL000252v2_alt:2920152-2921548	0	+	2920152	2920152	8553170	2	61,616,	0,780,
#Deleted in new
chr6_GL000252v2_alt	2924455	2931813	chr6_GL000252v2_alt:2924455-2931813	0	-	2924728	2931813	789624	4	437,168,292,53,	0,2418,6367,7305,
#Deleted in new
chr6_GL000252v2_alt	2924455	2928150	chr6_GL000252v2_alt:2924455-2928150	3	-	2924728	2928146	789624	3	437,168,125,	0,2418,3570,
#Deleted in new
chr6_GL000252v2_alt	2924455	2929250	chr6_GL000252v2_alt:2924455-2929250	0	-	2924455	2924455	8553170	3	437,168,247,	0,2418,4548,
#Deleted in new
chr6_GL000252v2_alt	2924455	2928137	chr6_GL000252v2_alt:2924455-2928137	0	-	2924455	2924455	8553170	3	437,168,206,	0,2418,3476,
#Deleted in new
chr6_GL000252v2_alt	2924455	2930983	chr6_GL000252v2_alt:2924455-2930983	0	-	2924455	2924455	8553170	6	437,207,168,159,212,161,	0,1739,2418,4548,4964,6367,
#Deleted in new
chr6_GL000252v2_alt	2924455	2931813	chr6_GL000252v2_alt:2924455-2931813	0	-	2924455	2924455	8553170	4	437,168,172,53,	0,2418,4548,7305,
#Deleted in new
chr6_GL000252v2_alt	2924455	2928137	chr6_GL000252v2_alt:2924455-2928137	0	-	2924455	2924455	8553170	2	437,1264,	0,2418,
#Deleted in new
chr6_GL000252v2_alt	2929121	2929734	chr6_GL000252v2_alt:2929121-2929734	0	-	2929121	2929121	8553170	2	54,315,	0,298,
#Deleted in new
chr6_GL000252v2_alt	2934712	2950837	chr6_GL000252v2_alt:2934712-2950837	1	-	2934975	2950532	789624	18	347,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,462,	0,549,693,875,1092,1300,1774,2066,2632,3129,3590,4630,4855,6078,6410,9997,13993,15663,
#Deleted in new
chr6_GL000252v2_alt	2934718	2951180	chr6_GL000252v2_alt:2934718-2951180	3	-	2934975	2951174	789624	20	341,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,67,57,267,	0,543,687,869,1086,1294,1768,2060,2626,3123,3584,4624,4849,6072,6404,9991,13987,14319,15119,16195,
#Deleted in new
chr6_GL000252v2_alt	2934718	2938366	chr6_GL000252v2_alt:2934718-2938366	0	-	2934718	2934718	8553170	10	341,47,99,77,63,57,397,124,50,64,	0,543,687,869,1086,1294,1768,2626,3123,3584,
#Deleted in new
chr6_GL000252v2_alt	2934718	2936153	chr6_GL000252v2_alt:2934718-2936153	0	-	2934718	2934718	8553170	5	341,47,99,77,349,	0,543,687,869,1086,
#Deleted in new
chr6_GL000252v2_alt	2934718	2951104	chr6_GL000252v2_alt:2934718-2951104	0	-	2934718	2934718	789624	19	341,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,57,191,	0,543,687,869,1086,1294,1768,2060,2626,3123,3584,4624,4849,6072,6404,9991,13987,15119,16195,
#Deleted in new
chr6_GL000252v2_alt	2934718	2950837	chr6_GL000252v2_alt:2934718-2950837	0	-	2934718	2934718	789624	20	341,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,67,57,462,	0,543,687,869,1086,1294,1768,2060,2626,3123,3584,4624,4849,6072,6404,9991,13987,14319,15119,15657,
#Deleted in new
chr6_GL000252v2_alt	2935150	2936085	chr6_GL000252v2_alt:2935150-2936085	0	-	2935150	2935150	8553170	4	158,99,77,281,	0,255,437,654,
#Deleted in new
chr6_GL000252v2_alt	2935338	2936067	chr6_GL000252v2_alt:2935338-2936067	0	-	2935338	2935338	8553170	3	166,77,263,	0,249,466,
#Deleted in new
chr6_GL000252v2_alt	2935416	2938009	chr6_GL000252v2_alt:2935416-2938009	0	-	2935416	2935416	8553170	8	88,77,63,57,64,105,124,168,	0,171,388,596,1070,1362,1928,2425,
#Deleted in new
chr6_GL000252v2_alt	2935536	2939410	chr6_GL000252v2_alt:2935536-2939410	0	-	2935536	2935536	8553170	8	128,265,64,105,124,50,64,68,	0,268,950,1242,1808,2305,2766,3806,
#Deleted in new
chr6_GL000252v2_alt	2936778	2951097	chr6_GL000252v2_alt:2936778-2951097	0	-	2936778	2936778	8553170	11	105,124,50,64,102,115,123,74,86,87,184,	0,566,1063,1524,2564,2789,4012,4344,7931,11927,14135,
#Deleted in new
chr6_GL000252v2_alt	2938319	2950630	chr6_GL000252v2_alt:2938319-2950630	0	-	2938319	2950532	789624	8	47,102,115,123,74,86,87,255,	0,1023,1248,2471,2803,6390,10386,12056,
#Deleted in new
chr6_GL000252v2_alt	2939209	2940820	chr6_GL000252v2_alt:2939209-2940820	0	-	2939209	2939209	8553170	3	235,115,30,	0,358,1581,
#Deleted in new
chr6_GL000252v2_alt	2939352	2940058	chr6_GL000252v2_alt:2939352-2940058	0	-	2939352	2939352	8553170	2	92,491,	0,215,
#Deleted in new
chr6_GL000252v2_alt	2954648	2958359	chr6_GL000252v2_alt:2954648-2958359	3	+	2954670	2958355	789624	6	74,330,264,156,67,29,	0,573,986,3141,3467,3682,
#Deleted in new
chr6_GL000252v2_alt	2954667	2965680	chr6_GL000252v2_alt:2954667-2965680	3	+	2954670	2965566	789624	6	55,330,264,156,123,338,	0,554,967,3122,8596,10675,
#Deleted in new
chr6_GL000252v2_alt	2960097	2961574	chr6_GL000252v2_alt:2960097-2961574	0	-	2960097	2960097	8553170	3	206,126,52,	0,328,1425,
#Deleted in new
chr6_GL000252v2_alt	2960097	2961574	chr6_GL000252v2_alt:2960097-2961574	1	-	2960102	2961574	789624	3	205,126,52,	0,328,1425,
#Deleted in new
chr6_GL000252v2_alt	2960102	2961574	chr6_GL000252v2_alt:2960102-2961574	3	-	2960300	2961574	789624	3	221,126,52,	0,323,1420,
#Deleted in new
chr6_GL000252v2_alt	2960102	2961574	chr6_GL000252v2_alt:2960102-2961574	1	-	2960300	2961574	789624	2	449,52,	0,1420,
#Deleted in new
chr6_GL000252v2_alt	2963117	2965566	chr6_GL000252v2_alt:2963117-2965566	1	+	2963117	2965566	789624	3	55,123,224,	0,146,2225,
#Deleted in new
chr6_GL000252v2_alt	2963117	2965566	chr6_GL000252v2_alt:2963117-2965566	2	+	2963117	2965566	789624	3	55,123,345,	0,146,2104,
#Deleted in new
chr6_GL000252v2_alt	2963117	2965566	chr6_GL000252v2_alt:2963117-2965566	0	+	2963117	2963117	8553170	2	269,224,	0,2225,
#Deleted in new
chr6_GL000252v2_alt	2966355	2974472	chr6_GL000252v2_alt:2966355-2974472	0	+	2966355	2966355	8553170	7	90,135,43,348,91,258,1741,	0,4410,4808,5045,5548,5993,6376,
#Deleted in new
chr6_GL000252v2_alt	2966409	2969607	chr6_GL000252v2_alt:2966409-2969607	3	-	2966857	2969441	789624	3	663,111,218,	0,1445,2980,
#Deleted in new
chr6_GL000252v2_alt	2966409	2969441	chr6_GL000252v2_alt:2966409-2969441	1	-	2966857	2967067	789624	4	663,111,111,52,	0,1445,2305,2980,
#Deleted in new
chr6_GL000252v2_alt	2971134	2974472	chr6_GL000252v2_alt:2971134-2974472	3	+	2971145	2972805	789624	6	72,348,91,41,99,1741,	0,266,769,1214,1373,1597,
#Deleted in new
chr6_GL000252v2_alt	2971145	2974472	chr6_GL000252v2_alt:2971145-2974472	1	+	2971145	2972836	789624	6	61,348,91,41,80,1741,	0,255,758,1203,1381,1586,
#Deleted in new
chr6_GL000252v2_alt	2971145	2974472	chr6_GL000252v2_alt:2971145-2974472	1	+	2971145	2972805	789624	4	61,348,99,1741,	0,255,1362,1586,
#Deleted in new
chr6_GL000252v2_alt	2971145	2974472	chr6_GL000252v2_alt:2971145-2974472	1	+	2971145	2972836	789624	5	61,348,41,99,1741,	0,255,1203,1362,1586,
#Deleted in new
chr6_GL000252v2_alt	2971145	2974472	chr6_GL000252v2_alt:2971145-2974472	1	+	2971145	2972836	789624	4	61,348,80,1741,	0,255,1381,1586,
#Deleted in new
chr6_GL000252v2_alt	2971145	2974472	chr6_GL000252v2_alt:2971145-2974472	0	+	2971145	2971145	8553170	5	61,348,91,258,1741,	0,255,758,1203,1586,
#Deleted in new
chr6_GL000252v2_alt	2971145	2974472	chr6_GL000252v2_alt:2971145-2974472	0	+	2971145	2971145	8553170	5	61,348,91,41,1965,	0,255,758,1203,1362,
#Deleted in new
chr6_GL000252v2_alt	2974798	2978024	chr6_GL000252v2_alt:2974798-2978024	1	-	2974997	2976922	789624	7	316,150,120,74,100,357,213,	0,505,1135,1413,1608,1827,3013,
#Deleted in new
chr6_GL000252v2_alt	2974798	2978378	chr6_GL000252v2_alt:2974798-2978378	1	-	2974997	2976922	789624	7	316,150,120,74,100,361,567,	0,505,1135,1413,1608,1827,3013,
#Deleted in new
chr6_GL000252v2_alt	2974798	2976638	chr6_GL000252v2_alt:2974798-2976638	0	-	2974957	2976638	789624	6	316,101,120,74,100,13,	0,505,1135,1413,1608,1827,
#Deleted in new
chr6_GL000252v2_alt	2974798	2977553	chr6_GL000252v2_alt:2974798-2977553	1	-	2974997	2976922	789624	6	316,150,120,74,100,928,	0,505,1135,1413,1608,1827,
#Deleted in new
chr6_GL000252v2_alt	2974798	2977268	chr6_GL000252v2_alt:2974798-2977268	2	-	2974798	2974798	8553170	4	316,150,573,643,	0,505,1135,1827,
#Deleted in new
chr6_GL000252v2_alt	2974798	2977988	chr6_GL000252v2_alt:2974798-2977988	0	-	2974798	2974798	8553170	6	316,150,120,74,100,177,	0,505,1135,1413,1608,3013,
#Deleted in new
chr6_GL000252v2_alt	2974798	2978023	chr6_GL000252v2_alt:2974798-2978023	0	-	2974798	2974798	8553170	5	316,150,120,100,212,	0,505,1135,1608,3013,
#Deleted in new
chr6_GL000252v2_alt	2975335	2977557	chr6_GL000252v2_alt:2975335-2977557	0	-	2975335	2976922	789624	6	118,120,74,100,361,114,	0,598,876,1071,1290,2108,
#Deleted in new
chr6_GL000252v2_alt	2975366	2977262	chr6_GL000252v2_alt:2975366-2977262	0	-	2975366	2976922	789624	6	87,120,74,100,361,140,	0,567,845,1040,1259,1756,
#Deleted in new
chr6_GL000252v2_alt	2975941	2978006	chr6_GL000252v2_alt:2975941-2978006	0	-	2975941	2975941	8553170	3	565,361,195,	0,684,1870,
#Deleted in new
chr6_GL000252v2_alt	2978341	2987529	chr6_GL000252v2_alt:2978341-2987529	3	-	2978602	2984063	0	8	423,182,107,126,110,89,125,35,	0,1636,2985,3255,3573,5683,8688,9153,
#Deleted in new
chr6_GL000252v2_alt	2978341	2984330	chr6_GL000252v2_alt:2978341-2984330	1	-	2978602	2984063	0	6	423,182,107,126,110,306,	0,1636,2985,3255,3573,5683,
#Deleted in new
chr6_GL000252v2_alt	2978341	2985081	chr6_GL000252v2_alt:2978341-2985081	1	-	2978602	2984063	0	7	423,182,107,126,110,89,523,	0,1636,2985,3255,3573,5683,6217,
#Deleted in new
chr6_GL000252v2_alt	2978341	2984335	chr6_GL000252v2_alt:2978341-2984335	1	-	2978602	2984063	0	7	423,182,107,126,110,151,28,	0,1636,2985,3255,3573,5683,5966,
#Deleted in new
chr6_GL000252v2_alt	2978343	2984308	chr6_GL000252v2_alt:2978343-2984308	1	-	2978602	2984063	0	7	421,182,107,126,110,89,63,	0,1634,2983,3253,3571,5681,5902,
#Deleted in new
chr6_GL000252v2_alt	2987756	2992004	chr6_GL000252v2_alt:2987756-2992004	0	+	2988232	2992004	789624	8	72,27,160,124,81,63,122,45,	0,203,463,1172,2890,3121,3917,4203,
#Deleted in new
chr6_GL000252v2_alt	2987762	3010450	chr6_GL000252v2_alt:2987762-3010450	3	+	2988232	3010305	789624	25	66,160,124,81,63,122,110,36,83,46,139,63,129,73,110,81,88,190,127,150,75,144,138,74,257,	0,457,1166,2884,3115,3911,4197,4553,5244,7394,13308,13574,18176,18559,18777,19108,19436,19797,20101,20701,21199,21483,21829,22123,22431,
#Deleted in new
chr6_GL000252v2_alt	2987765	3010450	chr6_GL000252v2_alt:2987765-3010450	1	+	2988232	3010305	789624	25	221,160,124,81,63,122,110,36,83,46,139,63,129,73,110,81,88,190,127,150,75,144,138,74,257,	0,454,1163,2881,3112,3908,4194,4550,5241,7391,13305,13571,18173,18556,18774,19105,19433,19794,20098,20698,21196,21480,21826,22120,22428,
#Deleted in new
chr6_GL000252v2_alt	2987782	2991250	chr6_GL000252v2_alt:2987782-2991250	0	+	2987782	2987782	8553170	5	46,160,124,81,373,	0,437,1146,2864,3095,
#Deleted in new
chr6_GL000252v2_alt	2987785	3012625	chr6_GL000252v2_alt:2987785-3012625	3	+	2988232	3010305	789624	29	43,160,124,81,63,122,161,36,83,46,139,63,129,73,110,81,88,190,127,150,75,144,138,74,749,141,96,90,416,	0,434,1143,2861,3092,3888,4123,4530,5221,7371,13285,13551,18153,18536,18754,19085,19413,19774,20078,20678,21176,21460,21806,22100,22408,23403,24052,24254,24424,
#Deleted in new
chr6_GL000252v2_alt	2987786	3010450	chr6_GL000252v2_alt:2987786-3010450	1	+	2988232	3010305	789624	25	42,160,124,81,63,122,110,36,83,46,139,63,129,73,110,81,88,190,127,150,78,144,138,74,257,	0,433,1142,2860,3091,3887,4173,4529,5220,7370,13284,13550,18152,18535,18753,19084,19412,19773,20077,20677,21172,21459,21805,22099,22407,
#Deleted in new
chr6_GL000252v2_alt	2987786	3010450	chr6_GL000252v2_alt:2987786-3010450	1	+	2988232	3010305	789624	25	42,160,124,81,63,122,161,36,83,46,139,63,129,73,110,81,88,190,127,150,75,144,48,74,257,	0,433,1142,2860,3091,3887,4122,4529,5220,7370,13284,13550,18152,18535,18753,19084,19412,19773,20077,20677,21175,21459,21805,22099,22407,
#Deleted in new
chr6_GL000252v2_alt	2987786	3006382	chr6_GL000252v2_alt:2987786-3006382	0	+	2987786	2987786	8553170	13	42,160,124,81,63,122,122,36,46,139,63,129,61,	0,433,1142,2860,3091,3887,4161,4529,7370,13284,13550,18152,18535,
#Deleted in new
chr6_GL000252v2_alt	2989011	3001810	chr6_GL000252v2_alt:2989011-3001810	0	+	2989011	2989011	8553170	9	41,81,63,122,110,36,46,139,474,	0,1635,1866,2662,2948,3304,6145,12059,12325,
#Deleted in new
chr6_GL000252v2_alt	2991747	3007265	chr6_GL000252v2_alt:2991747-3007265	0	+	2991747	3007265	789624	12	48,110,36,83,46,139,63,129,88,110,81,67,	0,212,568,1259,3409,9323,9589,14191,14559,14792,15123,15451,
#Deleted in new
chr6_GL000252v2_alt	2999266	3006908	chr6_GL000252v2_alt:2999266-3006908	0	+	2999266	2999266	8553170	6	158,139,63,129,110,38,	0,1804,2070,6672,7273,7604,
#Deleted in new
chr6_GL000252v2_alt	3004365	3010450	chr6_GL000252v2_alt:3004365-3010450	1	+	3005902	3010305	789624	14	325,872,73,110,81,88,190,127,150,75,144,138,74,257,	0,830,1956,2174,2505,2833,3194,3498,4098,4596,4880,5226,5520,5828,
#Deleted in new
chr6_GL000252v2_alt	3004724	3004827	chr6_GL000252v2_alt:3004724-3004827	3	-	3004724	3004724	8553170	1	103,	0,
#Deleted in new
chr6_GL000252v2_alt	3005968	3007276	chr6_GL000252v2_alt:3005968-3007276	0	+	3005968	3005968	8553170	4	99,73,110,406,	0,353,571,902,
#Deleted in new
chr6_GL000252v2_alt	3007218	3012625	chr6_GL000252v2_alt:3007218-3012625	0	+	3007218	3009562	789624	14	68,190,127,150,75,144,116,74,151,379,141,96,90,416,	0,341,645,1245,1743,2027,2305,2667,2975,3345,3970,4619,4821,4991,
#Deleted in new
chr6_GL000252v2_alt	3007690	3010450	chr6_GL000252v2_alt:3007690-3010450	0	+	3007690	3009704	789624	8	59,127,75,144,31,90,74,257,	0,173,1271,1555,1833,1949,2195,2503,
#Deleted in new
chr6_GL000252v2_alt	3008493	3010923	chr6_GL000252v2_alt:3008493-3010923	0	+	3008493	3008493	8553170	7	120,75,144,48,74,151,99,	0,468,752,1098,1392,1700,2331,
#Deleted in new
chr6_GL000252v2_alt	3008985	3010450	chr6_GL000252v2_alt:3008985-3010450	0	+	3008985	3010305	789624	5	51,144,90,74,257,	0,260,654,900,1208,
#Deleted in new
chr6_GL000252v2_alt	3009696	3010450	chr6_GL000252v2_alt:3009696-3010450	0	+	3009696	3009696	8553170	2	263,257,	0,497,
#Deleted in new
chr6_GL000252v2_alt	3010217	3012625	chr6_GL000252v2_alt:3010217-3012625	0	+	3010217	3010305	789624	4	127,141,96,586,	0,971,1620,1822,
#Deleted in new
chr6_GL000252v2_alt	3010572	3012625	chr6_GL000252v2_alt:3010572-3012625	3	+	3010828	3012305	789624	4	370,141,96,413,	0,616,1265,1640,
#Deleted in new
chr6_GL000252v2_alt	3010769	3012625	chr6_GL000252v2_alt:3010769-3012625	1	+	3010828	3012305	789624	5	173,141,96,90,416,	0,419,1068,1270,1440,
#Deleted in new
chr6_GL000252v2_alt	3010769	3012619	chr6_GL000252v2_alt:3010769-3012619	1	+	3010828	3012305	789624	4	173,141,96,410,	0,419,1068,1440,
#Deleted in new
chr6_GL000252v2_alt	3011393	3012073	chr6_GL000252v2_alt:3011393-3012073	0	+	3011393	3011393	8553170	2	540,34,	0,646,
#Deleted in new
chr6_GL000252v2_alt	3012083	3013362	chr6_GL000252v2_alt:3012083-3013362	3	-	3012083	3012083	789624	2	411,50,	0,1229,
#Deleted in new
chr6_GL000252v2_alt	3013363	3025068	chr6_GL000252v2_alt:3013363-3025068	3	-	3013367	3024553	789624	17	181,175,140,302,93,153,133,186,117,113,170,196,111,97,279,249,186,	0,293,655,873,1568,1772,2032,3428,4085,4411,7364,7652,8926,9743,10374,10956,11519,
#Deleted in new
chr6_GL000252v2_alt	3013810	3015461	chr6_GL000252v2_alt:3013810-3015461	0	-	3013810	3013810	8553170	5	21,520,93,153,66,	0,208,1121,1325,1585,
#Deleted in new
chr6_GL000252v2_alt	3014062	3025046	chr6_GL000252v2_alt:3014062-3025046	0	-	3014062	3014062	8553170	15	96,302,93,153,133,186,117,113,170,80,111,97,79,249,164,	0,174,869,1073,1333,2729,3386,3712,6665,6953,8227,9044,9875,10257,10820,
#Deleted in new
chr6_GL000252v2_alt	3019043	3020781	chr6_GL000252v2_alt:3019043-3020781	0	-	3019043	3019043	8553170	2	554,54,	0,1684,
#Deleted in new
chr6_GL000252v2_alt	3023832	3024693	chr6_GL000252v2_alt:3023832-3024693	0	-	3023832	3023832	8553170	2	184,374,	0,487,
#Deleted in new
chr6_GL000252v2_alt	3025291	3043727	chr6_GL000252v2_alt:3025291-3043727	3	-	3025367	3042991	789624	30	145,326,112,207,156,128,79,69,105,126,71,106,91,159,104,125,91,95,109,120,82,165,128,101,85,125,139,135,420,408,	0,1449,1907,2090,2480,2923,3187,3352,3501,3963,4173,4329,4569,4767,5012,5203,5578,6696,6876,7077,7728,8051,14092,14353,14699,14874,15239,15468,17313,18028,
#Deleted in new
chr6_GL000252v2_alt	3025291	3025956	chr6_GL000252v2_alt:3025291-3025956	0	-	3025291	3025291	8553170	2	145,247,	0,418,
#Deleted in new
chr6_GL000252v2_alt	3026590	3026679	chr6_GL000252v2_alt:3026590-3026679	3	-	3026590	3026590	8553170	1	89,	0,
#Deleted in new
chr6_GL000252v2_alt	3027003	3027825	chr6_GL000252v2_alt:3027003-3027825	0	-	3027003	3027003	8553170	3	63,112,444,	0,195,378,
#Deleted in new
chr6_GL000252v2_alt	3028228	3030363	chr6_GL000252v2_alt:3028228-3030363	0	-	3028228	3030363	789624	10	114,79,69,105,126,71,106,91,42,60,	0,250,415,564,1026,1236,1392,1632,1947,2075,
#Deleted in new
chr6_GL000252v2_alt	3028324	3029968	chr6_GL000252v2_alt:3028324-3029968	0	-	3028324	3028324	8553170	8	18,79,69,105,126,71,106,154,	0,154,319,468,930,1140,1296,1490,
#Deleted in new
chr6_GL000252v2_alt	3028650	3029699	chr6_GL000252v2_alt:3028650-3029699	0	-	3028650	3028650	8553170	3	62,105,445,	0,142,604,
#Deleted in new
chr6_GL000252v2_alt	3028651	3029524	chr6_GL000252v2_alt:3028651-3029524	0	-	3028651	3028651	8553170	2	61,732,	0,141,
#Deleted in new
chr6_GL000252v2_alt	3029131	3030194	chr6_GL000252v2_alt:3029131-3030194	0	-	3029131	3029131	8553170	3	249,262,334,	0,333,729,
#Deleted in new
chr6_GL000252v2_alt	3029466	3031013	chr6_GL000252v2_alt:3029466-3031013	0	-	3029466	3029466	8553170	6	69,106,91,159,316,144,	0,154,394,592,837,1403,
#Deleted in new
chr6_GL000252v2_alt	3029473	3030203	chr6_GL000252v2_alt:3029473-3030203	0	-	3029473	3029473	8553170	4	62,106,137,145,	0,147,341,585,
#Deleted in new
chr6_GL000252v2_alt	3030185	3032209	chr6_GL000252v2_alt:3030185-3032209	0	-	3030185	3030185	8553170	4	434,91,95,42,	0,684,1802,1982,
#Deleted in new
chr6_GL000252v2_alt	3032371	3040734	chr6_GL000252v2_alt:3032371-3040734	0	-	3032371	3032371	8553170	8	117,82,165,128,101,85,125,204,	0,648,971,7012,7273,7619,7794,8159,
#Deleted in new
chr6_GL000252v2_alt	3033019	3040052	chr6_GL000252v2_alt:3033019-3040052	0	-	3033019	3033019	8553170	5	82,165,128,221,62,	0,323,6364,6625,6971,
#Deleted in new
chr6_GL000252v2_alt	3040759	3043273	chr6_GL000252v2_alt:3040759-3043273	0	-	3040759	3042991	789624	2	135,669,	0,1845,
#Deleted in new
chr6_GL000252v2_alt	3045169	3054759	chr6_GL000252v2_alt:3045169-3054759	3	-	3045530	3054532	0	5	487,60,31,68,230,	0,594,1081,8680,9360,
#Deleted in new
chr6_GL000252v2_alt	3045169	3054592	chr6_GL000252v2_alt:3045169-3054592	0	-	3045169	3045169	8553170	4	487,60,31,63,	0,594,1081,9360,
#Deleted in new
chr6_GL000252v2_alt	3045169	3054434	chr6_GL000252v2_alt:3045169-3054434	0	-	3045169	3045169	8553170	5	487,60,31,68,174,	0,594,1081,8680,9091,
#Deleted in new
chr6_GL000252v2_alt	3045169	3054627	chr6_GL000252v2_alt:3045169-3054627	0	-	3045169	3045169	8553170	4	487,60,68,98,	0,594,8680,9360,
#Deleted in new
chr6_GL000252v2_alt	3045169	3054435	chr6_GL000252v2_alt:3045169-3054435	0	-	3045169	3045169	8553170	5	487,60,31,47,142,	0,594,1081,8680,9124,
#Deleted in new
chr6_GL000252v2_alt	3045169	3054741	chr6_GL000252v2_alt:3045169-3054741	0	-	3045169	3045169	8553170	3	487,68,212,	0,8680,9360,
#Deleted in new
chr6_GL000252v2_alt	3050526	3054377	chr6_GL000252v2_alt:3050526-3054377	0	-	3050526	3050526	8553170	4	42,26,68,117,	0,128,3323,3734,
#Deleted in new
chr6_GL000252v2_alt	3057397	3062844	chr6_GL000252v2_alt:3057397-3062844	3	-	3057825	3059751	0	2	2367,177,	0,5270,
#Deleted in new
chr6_GL000252v2_alt	3063242	3065725	chr6_GL000252v2_alt:3063242-3065725	3	+	3063535	3065461	0	1	2483,	0,
#Deleted in new
chr6_GL000252v2_alt	3063321	3065725	chr6_GL000252v2_alt:3063321-3065725	1	+	3063535	3065461	789624	2	289,1620,	0,784,
#Deleted in new
chr6_GL000252v2_alt	3075513	3078034	chr6_GL000252v2_alt:3075513-3078034	3	+	3075729	3077655	0	1	2521,	0,
#Deleted in new
chr6_GL000252v2_alt	3082386	3087539	chr6_GL000252v2_alt:3082386-3087539	3	+	3085106	3087441	789624	4	593,41,200,219,	0,802,2627,4934,
#Deleted in new
chr6_GL000252v2_alt	3082405	3087539	chr6_GL000252v2_alt:3082405-3087539	1	+	3085106	3087441	789624	4	142,41,200,219,	0,783,2608,4915,
#Deleted in new
chr6_GL000252v2_alt	3082686	3087539	chr6_GL000252v2_alt:3082686-3087539	1	+	3085106	3087441	789624	5	293,41,94,200,219,	0,502,1515,2327,4634,
#Deleted in new
chr6_GL000252v2_alt	3082686	3087539	chr6_GL000252v2_alt:3082686-3087539	1	+	3085106	3087441	789624	4	150,41,200,219,	0,502,2327,4634,
#Deleted in new
chr6_GL000252v2_alt	3082686	3087539	chr6_GL000252v2_alt:3082686-3087539	1	+	3085106	3087441	789624	3	293,200,219,	0,2327,4634,
#Deleted in new
chr6_GL000252v2_alt	3082696	3087539	chr6_GL000252v2_alt:3082696-3087539	1	+	3085106	3087441	789624	5	283,41,219,200,219,	0,492,1380,2317,4624,
#Deleted in new
chr6_GL000252v2_alt	3082700	3087544	chr6_GL000252v2_alt:3082700-3087544	1	+	3085106	3087441	789624	4	279,45,200,224,	0,488,2313,4620,
#Deleted in new
chr6_GL000252v2_alt	3082710	3087539	chr6_GL000252v2_alt:3082710-3087539	1	+	3085106	3087441	789624	5	269,41,223,200,219,	0,478,1362,2303,4610,
#Deleted in new
chr6_GL000252v2_alt	3083041	3083104	chr6_GL000252v2_alt:3083041-3083104	3	+	3083041	3083041	789624	1	63,	0,
#Deleted in new
chr6_GL000252v2_alt	3083063	3087539	chr6_GL000252v2_alt:3083063-3087539	1	+	3085106	3087441	789624	3	166,200,219,	0,1950,4257,
#Deleted in new
chr6_GL000252v2_alt	3084620	3087542	chr6_GL000252v2_alt:3084620-3087542	1	+	3085106	3087441	789624	2	593,222,	0,2700,
#Deleted in new
chr6_GL000252v2_alt	3084853	3084920	chr6_GL000252v2_alt:3084853-3084920	3	+	3084853	3084853	789624	1	67,	0,
#Deleted in new
chr6_GL000252v2_alt	3105436	3110574	chr6_GL000252v2_alt:3105436-3110574	0	-	3105436	3105436	8553170	3	2287,2150,179,	0,2383,4959,
#Deleted in new
chr6_GL000252v2_alt	3106829	3110684	chr6_GL000252v2_alt:3106829-3110684	3	-	3107496	3110554	789624	6	894,223,183,263,193,289,	0,990,1387,2136,2947,3566,
#Deleted in new
chr6_GL000252v2_alt	3106829	3110594	chr6_GL000252v2_alt:3106829-3110594	0	-	3109168	3110554	789624	5	894,223,183,263,199,	0,990,1387,2136,3566,
#Deleted in new
chr6_GL000252v2_alt	3106829	3110600	chr6_GL000252v2_alt:3106829-3110600	0	-	3107950	3110554	789624	6	894,137,183,263,193,205,	0,990,1387,2136,2947,3566,
#Deleted in new
chr6_GL000252v2_alt	3106829	3110583	chr6_GL000252v2_alt:3106829-3110583	0	-	3106829	3106829	8553170	4	1570,263,193,188,	0,2136,2947,3566,
#Deleted in new
chr6_GL000252v2_alt	3110969	3126775	chr6_GL000252v2_alt:3110969-3126775	1	-	3111404	3126754	789624	21	557,85,95,71,74,104,95,254,103,93,100,236,84,88,61,126,100,79,74,49,61,	0,1460,1624,1818,2123,2306,2498,2681,5959,6349,7407,7616,8118,8278,11264,11525,11733,12656,12860,13838,15745,
#Deleted in new
chr6_GL000252v2_alt	3110972	3125445	chr6_GL000252v2_alt:3110972-3125445	1	-	3111404	3123639	789624	21	554,85,95,71,74,104,95,254,103,93,100,236,84,88,61,126,100,79,74,49,109,	0,1457,1621,1815,2120,2303,2495,2678,5956,6346,7404,7613,8115,8275,11261,11522,11730,12653,12857,13835,14364,
#Deleted in new
chr6_GL000252v2_alt	3110972	3126820	chr6_GL000252v2_alt:3110972-3126820	3	-	3111404	3126754	789624	20	554,85,95,71,74,104,95,254,103,93,100,236,84,88,61,100,79,74,49,106,	0,1457,1621,1815,2120,2303,2495,2678,5956,6346,7404,7613,8115,8275,11261,11730,12653,12857,13835,15742,
#Deleted in new
chr6_GL000252v2_alt	3111354	3112458	chr6_GL000252v2_alt:3111354-3112458	0	-	3111354	3111354	8553170	2	172,220,	0,884,
#Deleted in new
chr6_GL000252v2_alt	3113467	3126741	chr6_GL000252v2_alt:3113467-3126741	0	-	3113467	3126741	789624	13	95,254,103,93,84,88,61,126,100,79,74,49,27,	0,183,3461,3851,5620,5780,8766,9027,9235,10158,10362,11340,13247,
#Deleted in new
chr6_GL000252v2_alt	3113836	3118976	chr6_GL000252v2_alt:3113836-3118976	0	-	3113836	3113836	8553170	4	68,103,93,391,	0,3092,3482,4749,
#Deleted in new
chr6_GL000252v2_alt	3117369	3119018	chr6_GL000252v2_alt:3117369-3119018	0	-	3117369	3117369	8553170	3	42,100,433,	0,1007,1216,
#Deleted in new
chr6_GL000252v2_alt	3122298	3126771	chr6_GL000252v2_alt:3122298-3126771	0	-	3122298	3122298	8553170	6	322,100,79,74,49,57,	0,404,1327,1531,2509,4416,
#Deleted in new
chr6_GL000252v2_alt	3122595	3126771	chr6_GL000252v2_alt:3122595-3126771	0	-	3122595	3122595	8553170	6	25,100,121,74,49,57,	0,107,988,1234,2212,4119,
#Deleted in new
chr6_GL000252v2_alt	3127532	3144976	chr6_GL000252v2_alt:3127532-3144976	3	-	3127857	3144976	789624	27	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,102,115,135,156,41,85,254,219,280,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9210,9469,9709,12648,12935,13067,16504,16847,17164,
#Deleted in new
chr6_GL000252v2_alt	3127532	3144996	chr6_GL000252v2_alt:3127532-3144996	1	-	3127857	3144976	789624	26	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,115,135,156,41,85,254,219,300,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9469,9709,12648,12935,13067,16504,16847,17164,
#Deleted in new
chr6_GL000252v2_alt	3127532	3145458	chr6_GL000252v2_alt:3127532-3145458	1	-	3127857	3145451	0	28	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,102,115,135,156,41,85,254,219,67,49,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9210,9469,9709,12648,12935,13067,16504,16847,17164,17877,
#Deleted in new
chr6_GL000252v2_alt	3127532	3145451	chr6_GL000252v2_alt:3127532-3145451	1	-	3127857	3145451	0	27	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,115,135,156,41,85,254,219,67,42,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9469,9709,12648,12935,13067,16504,16847,17164,17877,
#Deleted in new
chr6_GL000252v2_alt	3127532	3132915	chr6_GL000252v2_alt:3127532-3132915	0	-	3127532	3127532	8553170	9	506,176,79,87,116,78,145,408,230,	0,914,1255,2940,3135,3603,4047,4633,5153,
#Deleted in new
chr6_GL000252v2_alt	3127532	3132580	chr6_GL000252v2_alt:3127532-3132580	0	-	3127532	3127532	8553170	9	506,176,79,87,116,78,145,168,162,	0,914,1255,2940,3135,3603,4047,4633,4886,
#Deleted in new
chr6_GL000252v2_alt	3127532	3134211	chr6_GL000252v2_alt:3127532-3134211	0	-	3127532	3127532	8553170	10	506,176,79,87,116,78,145,168,155,1526,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,
#Deleted in new
chr6_GL000252v2_alt	3127532	3144278	chr6_GL000252v2_alt:3127532-3144278	0	-	3127532	3127532	8553170	26	506,176,79,87,116,78,145,168,155,126,102,123,107,83,183,236,144,149,102,115,135,156,41,85,301,242,	0,914,1255,2940,3135,3603,4047,4633,4886,5132,6822,7016,7236,7818,8020,8282,8604,8840,9210,9469,9709,12648,12935,13067,13603,16504,
#Deleted in new
chr6_GL000252v2_alt	3131534	3131828	chr6_GL000252v2_alt:3131534-3131828	3	+	3131534	3131534	8553170	2	51,172,	0,122,
#Deleted in new
chr6_GL000252v2_alt	3131592	3134838	chr6_GL000252v2_alt:3131592-3134838	0	-	3131592	3134838	789624	7	132,168,155,144,102,123,70,	0,573,826,1093,2762,2956,3176,
#Deleted in new
chr6_GL000252v2_alt	3132446	3134893	chr6_GL000252v2_alt:3132446-3134893	0	-	3132446	3132446	8553170	4	127,105,102,345,	0,239,1908,2102,
#Deleted in new
chr6_GL000252v2_alt	3140191	3140960	chr6_GL000252v2_alt:3140191-3140960	0	-	3140191	3140191	8553170	3	145,41,361,	0,276,408,
#Deleted in new
chr6_GL000252v2_alt	3143174	3145461	chr6_GL000252v2_alt:3143174-3145461	0	-	3143174	3143174	8553170	4	1116,219,67,52,	0,1205,1522,2235,
#Deleted in new
chr6_GL000252v2_alt	3145558	3193454	chr6_GL000252v2_alt:3145558-3193454	1	+	3181451	3193137	789624	14	158,174,139,141,90,141,95,112,166,77,92,127,50,497,	0,35830,38143,39540,41450,45180,45446,45637,45865,46138,46356,46948,47201,47399,
#Deleted in new
chr6_GL000252v2_alt	3145560	3193452	chr6_GL000252v2_alt:3145560-3193452	0	+	3145560	3145560	8553170	15	156,174,99,139,141,90,141,95,112,166,77,92,127,54,495,	0,35828,36085,38141,39538,41448,45178,45444,45635,45863,46136,46354,46946,47195,47397,
#Deleted in new
chr6_GL000252v2_alt	3147380	3149766	chr6_GL000252v2_alt:3147380-3149766	3	-	3147699	3149079	789624	2	1719,156,	0,2230,
#Deleted in new
chr6_GL000252v2_alt	3148772	3187029	chr6_GL000252v2_alt:3148772-3187029	0	+	3148840	3187029	789624	5	141,174,99,141,21,	0,32616,32873,36326,38236,
#Deleted in new
chr6_GL000252v2_alt	3148772	3193454	chr6_GL000252v2_alt:3148772-3193454	3	+	3148840	3193137	0	14	141,174,99,141,90,141,95,112,166,77,92,127,50,497,	0,32616,32873,36326,38236,41966,42232,42423,42651,42924,43142,43734,43987,44185,
#Deleted in new
chr6_GL000252v2_alt	3148777	3182074	chr6_GL000252v2_alt:3148777-3182074	0	+	3148840	3182074	789624	4	136,174,99,130,	0,32611,32868,33167,
#Deleted in new
chr6_GL000252v2_alt	3167719	3185239	chr6_GL000252v2_alt:3167719-3185239	0	+	3167719	3167719	8553170	6	86,174,99,134,139,141,	0,13669,13926,14225,15982,17379,
#Deleted in new
chr6_GL000252v2_alt	3167762	3176673	chr6_GL000252v2_alt:3167762-3176673	0	+	3175531	3176673	789624	4	43,145,210,163,	0,7670,7971,8748,
#Deleted in new
chr6_GL000252v2_alt	3167874	3183769	chr6_GL000252v2_alt:3167874-3183769	0	+	3167874	3167874	8553170	5	67,174,99,134,68,	0,13514,13771,14070,15827,
#Deleted in new
chr6_GL000252v2_alt	3175255	3193454	chr6_GL000252v2_alt:3175255-3193454	1	+	3175802	3193137	789624	18	322,238,186,174,99,134,139,141,90,141,95,112,166,77,92,127,50,497,	0,478,1255,6133,6390,6689,8446,9843,11753,15483,15749,15940,16168,16441,16659,17251,17504,17702,
#Deleted in new
chr6_GL000252v2_alt	3175255	3193454	chr6_GL000252v2_alt:3175255-3193454	1	+	3175531	3193137	0	16	322,174,99,134,139,141,90,141,95,112,166,77,92,127,50,497,	0,6133,6390,6689,8446,9843,11753,15483,15749,15940,16168,16441,16659,17251,17504,17702,
#Deleted in new
chr6_GL000252v2_alt	3175270	3193452	chr6_GL000252v2_alt:3175270-3193452	1	+	3175531	3193137	0	18	307,210,186,174,99,134,139,141,90,141,95,112,166,77,92,127,50,495,	0,463,1240,6118,6375,6674,8431,9828,11738,15468,15734,15925,16153,16426,16644,17236,17489,17687,
#Deleted in new
chr6_GL000252v2_alt	3175303	3181509	chr6_GL000252v2_alt:3175303-3181509	0	+	3175531	3181509	789624	3	274,210,121,	0,430,6085,
#Deleted in new
chr6_GL000252v2_alt	3175309	3191099	chr6_GL000252v2_alt:3175309-3191099	0	+	3175531	3191099	789624	9	268,174,99,134,139,141,90,141,95,	0,6079,6336,6635,8392,9789,11699,15429,15695,
#Deleted in new
chr6_GL000252v2_alt	3175481	3182837	chr6_GL000252v2_alt:3175481-3182837	0	+	3175481	3175481	8553170	6	96,210,186,174,99,893,	0,252,1029,5907,6164,6463,
#Deleted in new
chr6_GL000252v2_alt	3175541	3193452	chr6_GL000252v2_alt:3175541-3193452	1	+	3175543	3193137	789624	14	36,174,99,141,90,141,95,112,166,77,92,127,50,495,	0,5847,6104,9557,11467,15197,15463,15654,15882,16155,16373,16965,17218,17416,
#Deleted in new
chr6_GL000252v2_alt	3180126	3182061	chr6_GL000252v2_alt:3180126-3182061	0	+	3180126	3180126	8553170	4	146,174,99,117,	0,1262,1519,1818,
#Deleted in new
chr6_GL000252v2_alt	3182061	3191538	chr6_GL000252v2_alt:3182061-3191538	0	+	3182061	3182061	8553170	8	17,139,141,90,185,95,112,115,	0,1640,3037,4947,8633,8943,9134,9362,
#Deleted in new
chr6_GL000252v2_alt	3182227	3189502	chr6_GL000252v2_alt:3182227-3189502	3	-	3182227	3182227	789624	3	184,63,540,	0,891,6735,
#Deleted in new
chr6_GL000252v2_alt	3183833	3193452	chr6_GL000252v2_alt:3183833-3193452	0	+	3183833	3183833	8553170	10	1406,90,141,95,112,166,77,92,127,495,	0,3175,6905,7171,7362,7590,7863,8081,8673,9124,
#Deleted in new
chr6_GL000252v2_alt	3191452	3193452	chr6_GL000252v2_alt:3191452-3193452	0	+	3191452	3191452	8553170	6	137,77,92,127,50,211,	0,244,462,1054,1307,1789,
#Deleted in new
chr6_GL000252v2_alt	3193429	3199864	chr6_GL000252v2_alt:3193429-3199864	3	+	3194001	3199810	0	19	51,166,234,186,174,102,137,139,132,102,138,98,118,154,77,101,133,50,210,	0,470,723,1357,1698,2092,2295,2724,3180,3593,3770,4400,4636,4969,5218,5494,5691,5905,6225,
#Deleted in new
chr6_GL000252v2_alt	3193773	3199864	chr6_GL000252v2_alt:3193773-3199864	1	+	3194001	3199810	0	18	292,234,186,174,102,137,139,132,102,138,98,118,154,77,101,133,50,210,	0,379,1013,1354,1748,1951,2380,2836,3249,3426,4056,4292,4625,4874,5150,5347,5561,5881,
#Deleted in new
chr6_GL000252v2_alt	3193876	3194648	chr6_GL000252v2_alt:3193876-3194648	0	+	3193876	3193876	8553170	2	189,496,	0,276,
#Deleted in new
chr6_GL000252v2_alt	3193905	3195623	chr6_GL000252v2_alt:3193905-3195623	0	+	3193905	3193905	8553170	5	160,121,186,174,102,	0,360,881,1222,1616,
#Deleted in new
chr6_GL000252v2_alt	3194001	3198425	chr6_GL000252v2_alt:3194001-3198425	0	+	3194001	3194001	8553170	12	64,234,186,174,102,137,139,132,102,138,98,360,	0,151,785,1126,1520,1723,2152,2608,3021,3198,3828,4064,
#Deleted in new
chr6_GL000252v2_alt	3195060	3197331	chr6_GL000252v2_alt:3195060-3197331	0	+	3195060	3195060	8553170	6	241,102,568,132,102,132,	0,461,664,1549,1962,2139,
#Deleted in new
chr6_GL000252v2_alt	3195576	3197378	chr6_GL000252v2_alt:3195576-3197378	0	+	3195576	3195576	8553170	6	47,137,139,132,102,179,	0,148,577,1033,1446,1623,
#Deleted in new
chr6_GL000252v2_alt	3196137	3197378	chr6_GL000252v2_alt:3196137-3197378	0	+	3196137	3196137	8553170	4	155,132,102,179,	0,472,885,1062,
#Deleted in new
chr6_GL000252v2_alt	3196777	3197378	chr6_GL000252v2_alt:3196777-3197378	0	+	3196777	3196777	8553170	2	347,179,	0,422,
#Deleted in new
chr6_GL000252v2_alt	3197510	3199024	chr6_GL000252v2_alt:3197510-3199024	0	+	3197510	3197510	8553170	4	417,487,77,101,	0,555,1137,1413,
#Deleted in new
chr6_GL000252v2_alt	3198653	3199864	chr6_GL000252v2_alt:3198653-3199864	0	+	3198653	3198653	8553170	4	371,133,50,210,	0,467,681,1001,
#Deleted in new
chr6_GL000252v2_alt	3199194	3199864	chr6_GL000252v2_alt:3199194-3199864	0	+	3199194	3199194	8553170	2	59,530,	0,140,
#Deleted in new
chr6_GL000252v2_alt	3199866	3206867	chr6_GL000252v2_alt:3199866-3206867	1	-	3200080	3206221	0	11	312,103,55,145,338,38,75,146,70,83,201,	0,1642,1993,2211,2468,2972,3132,4601,4849,6280,6800,
#Deleted in new
chr6_GL000252v2_alt	3200007	3206694	chr6_GL000252v2_alt:3200007-3206694	0	-	3200007	3200007	8553170	9	171,103,55,145,542,75,146,70,548,	0,1501,1852,2070,2327,2991,4460,4708,6139,
#Deleted in new
chr6_GL000252v2_alt	3200007	3206719	chr6_GL000252v2_alt:3200007-3206719	0	-	3200007	3200007	8553170	10	171,406,145,338,38,75,146,70,83,53,	0,1501,2070,2327,2831,2991,4460,4708,6139,6659,
#Deleted in new
chr6_GL000252v2_alt	3201537	3206732	chr6_GL000252v2_alt:3201537-3206732	0	-	3201537	3206221	789624	10	74,55,145,323,38,75,146,70,83,66,	0,322,540,797,1301,1461,2930,3178,4609,5129,
#Deleted in new
chr6_GL000252v2_alt	3202083	3206254	chr6_GL000252v2_alt:3202083-3206254	0	-	3202083	3206221	789624	7	139,338,38,75,146,70,108,	0,251,755,915,2384,2632,4063,
#Deleted in new
chr6_GL000252v2_alt	3202339	3206346	chr6_GL000252v2_alt:3202339-3206346	0	-	3202339	3206221	789624	6	318,38,75,146,70,200,	0,499,659,2128,2376,3807,
#Deleted in new
chr6_GL000252v2_alt	3202529	3206813	chr6_GL000252v2_alt:3202529-3206813	0	-	3202529	3202529	8553170	6	347,75,146,70,83,147,	0,469,1938,2186,3617,4137,
#Deleted in new
chr6_GL000252v2_alt	3202552	3206743	chr6_GL000252v2_alt:3202552-3206743	0	-	3202552	3202552	8553170	7	30,38,75,146,70,147,77,	0,286,446,1915,2163,3530,4114,
#Deleted in new
chr6_GL000252v2_alt	3202599	3206634	chr6_GL000252v2_alt:3202599-3206634	0	-	3202599	3206221	789624	7	73,38,75,146,70,83,280,	0,239,399,1868,2116,3547,3755,
#Deleted in new
chr6_GL000252v2_alt	3202844	3206740	chr6_GL000252v2_alt:3202844-3206740	0	-	3202844	3202844	8553170	5	32,75,318,83,74,	0,154,1623,3302,3822,
#Deleted in new
chr6_GL000252v2_alt	3202998	3206729	chr6_GL000252v2_alt:3202998-3206729	0	-	3202998	3202998	8553170	6	75,146,70,118,83,63,	0,1469,1717,2094,3148,3668,
#Deleted in new
chr6_GL000252v2_alt	3205174	3206221	chr6_GL000252v2_alt:3205174-3206221	3	-	3205174	3206221	789624	2	36,75,	0,972,
#Deleted in new
chr6_GL000252v2_alt	3206854	3217526	chr6_GL000252v2_alt:3206854-3217526	3	+	3206967	3217490	789624	28	135,104,110,118,115,75,54,191,129,146,147,85,107,147,97,213,111,231,138,138,105,148,127,211,111,219,141,237,	0,217,930,1140,1352,1586,1961,2116,2467,2829,3359,3634,3905,4333,4557,4833,5152,6703,7629,7924,8193,8635,8876,9248,9606,9791,10200,10435,
#Deleted in new
chr6_GL000252v2_alt	3206891	3209161	chr6_GL000252v2_alt:3206891-3209161	0	+	3206891	3206891	8553170	8	98,104,110,118,115,75,54,46,	0,180,893,1103,1315,1549,1924,2224,
#Deleted in new
chr6_GL000252v2_alt	3206913	3210358	chr6_GL000252v2_alt:3206913-3210358	0	+	3206913	3206913	8553170	5	76,46,129,146,145,	0,2202,2408,2770,3300,
#Deleted in new
chr6_GL000252v2_alt	3206922	3217526	chr6_GL000252v2_alt:3206922-3217526	0	+	3206922	3206922	8553170	23	67,104,110,118,115,75,635,146,147,378,147,97,213,111,231,138,138,105,148,127,211,467,472,	0,149,862,1072,1284,1518,1893,2761,3291,3566,4265,4489,4765,5084,6635,7561,7856,8125,8567,8808,9180,9475,10132,
#Deleted in new
chr6_GL000252v2_alt	3206965	3207733	chr6_GL000252v2_alt:3206965-3207733	0	+	3206965	3206965	8553170	2	24,662,	0,106,
#Deleted in new
chr6_GL000252v2_alt	3206967	3209000	chr6_GL000252v2_alt:3206967-3209000	1	+	3206967	3209000	789624	4	22,104,54,30,	0,104,1848,2003,
#Deleted in new
chr6_GL000252v2_alt	3209271	3210785	chr6_GL000252v2_alt:3209271-3210785	0	+	3209271	3209271	8553170	5	179,146,147,85,26,	0,412,942,1217,1488,
#Deleted in new
chr6_GL000252v2_alt	3214602	3216219	chr6_GL000252v2_alt:3214602-3216219	0	+	3214602	3214602	8553170	6	19,138,105,148,168,113,	0,176,445,887,1128,1504,
#Deleted in new
chr6_GL000252v2_alt	3214795	3216223	chr6_GL000252v2_alt:3214795-3216223	0	+	3214795	3214795	8553170	4	121,105,148,493,	0,252,694,935,
#Deleted in new
chr6_GL000252v2_alt	3214877	3216761	chr6_GL000252v2_alt:3214877-3216761	0	+	3214877	3214877	8553170	6	39,105,148,127,211,301,	0,170,612,853,1225,1583,
#Deleted in new
chr6_GL000252v2_alt	3216097	3217526	chr6_GL000252v2_alt:3216097-3217526	0	+	3216097	3216097	8553170	4	139,189,141,237,	0,578,957,1192,
#Deleted in new
chr6_GL000252v2_alt	3216228	3217183	chr6_GL000252v2_alt:3216228-3217183	0	+	3216228	3216228	8553170	3	85,111,538,	0,232,417,
#Deleted in new
chr6_GL000252v2_alt	3216249	3217526	chr6_GL000252v2_alt:3216249-3217526	0	+	3216249	3216249	8553170	4	64,111,219,472,	0,211,396,805,
#Deleted in new
chr6_GL000252v2_alt	3216254	3217526	chr6_GL000252v2_alt:3216254-3217526	0	+	3216254	3216254	8553170	4	59,174,219,472,	0,143,391,800,
#Deleted in new
chr6_GL000252v2_alt	3216460	3217526	chr6_GL000252v2_alt:3216460-3217526	0	+	3216460	3216460	8553170	4	111,219,37,237,	0,185,594,829,
#Deleted in new
chr6_GL000252v2_alt	3217584	3220067	chr6_GL000252v2_alt:3217584-3220067	3	-	3217651	3219450	789624	7	215,95,136,220,236,362,364,	0,299,533,796,1102,1510,2119,
#Deleted in new
chr6_GL000252v2_alt	3217584	3219911	chr6_GL000252v2_alt:3217584-3219911	1	-	3217651	3219450	789624	7	215,95,136,220,236,406,208,	0,299,533,796,1102,1510,2119,
#Deleted in new
chr6_GL000252v2_alt	3217584	3219746	chr6_GL000252v2_alt:3217584-3219746	1	-	3217651	3219450	789624	6	215,95,136,220,236,652,	0,299,533,796,1102,1510,
#Deleted in new
chr6_GL000252v2_alt	3217584	3219458	chr6_GL000252v2_alt:3217584-3219458	0	-	3217584	3217584	8553170	2	1338,364,	0,1510,
#Deleted in new
chr6_GL000252v2_alt	3217584	3218632	chr6_GL000252v2_alt:3217584-3218632	0	-	3217584	3217584	8553170	4	215,95,36,265,	0,299,533,783,
#Deleted in new
chr6_GL000252v2_alt	3217584	3219984	chr6_GL000252v2_alt:3217584-3219984	0	-	3217584	3217584	8553170	5	215,95,136,542,890,	0,299,533,796,1510,
#Deleted in new
chr6_GL000252v2_alt	3217584	3220013	chr6_GL000252v2_alt:3217584-3220013	0	-	3217584	3217584	8553170	6	215,95,136,147,236,310,	0,299,533,796,1102,2119,
#Deleted in new
chr6_GL000252v2_alt	3217584	3219870	chr6_GL000252v2_alt:3217584-3219870	0	-	3217584	3217584	8553170	3	215,1039,776,	0,299,1510,
#Deleted in new
chr6_GL000252v2_alt	3217584	3220027	chr6_GL000252v2_alt:3217584-3220027	0	-	3217584	3217584	8553170	4	215,95,136,1647,	0,299,533,796,
#Deleted in new
chr6_GL000252v2_alt	3217584	3219460	chr6_GL000252v2_alt:3217584-3219460	0	-	3217584	3217584	8553170	5	215,95,483,236,366,	0,299,533,1102,1510,
#Deleted in new
chr6_GL000252v2_alt	3218158	3219911	chr6_GL000252v2_alt:3218158-3219911	0	-	3218158	3218158	8553170	5	95,147,236,406,208,	0,222,528,936,1545,
#Deleted in new
chr6_GL000252v2_alt	3218385	3219873	chr6_GL000252v2_alt:3218385-3219873	0	-	3218385	3218385	8553170	4	142,228,262,170,	0,301,709,1318,
#Deleted in new
chr6_GL000252v2_alt	3218417	3219764	chr6_GL000252v2_alt:3218417-3219764	0	-	3218417	3218417	8553170	3	110,236,670,	0,269,677,
#Deleted in new
chr6_GL000252v2_alt	3218676	3219784	chr6_GL000252v2_alt:3218676-3219784	0	-	3218676	3218676	8553170	3	246,406,81,	0,418,1027,
#Deleted in new
chr6_GL000252v2_alt	3218949	3226783	chr6_GL000252v2_alt:3218949-3226783	0	+	3218949	3218949	8553170	4	100,643,137,108,	0,694,1446,7726,
#Deleted in new
chr6_GL000252v2_alt	3218949	3229218	chr6_GL000252v2_alt:3218949-3229218	3	+	3219985	3228822	789624	8	100,643,137,96,140,98,148,442,	0,694,1446,7726,8237,9274,9477,9827,
#Deleted in new
chr6_GL000252v2_alt	3219643	3229219	chr6_GL000252v2_alt:3219643-3229219	1	+	3219771	3228822	789624	8	348,210,137,96,140,98,148,443,	0,433,752,7032,7543,8580,8783,9133,
#Deleted in new
chr6_GL000252v2_alt	3219718	3229219	chr6_GL000252v2_alt:3219718-3229219	1	+	3219771	3228822	789624	8	273,210,137,108,140,98,148,443,	0,358,677,6957,7468,8505,8708,9058,
#Deleted in new
chr6_GL000252v2_alt	3220114	3229219	chr6_GL000252v2_alt:3220114-3229219	0	+	3220114	3220114	8553170	6	172,137,96,1135,148,443,	0,281,6561,7072,8312,8662,
#Deleted in new
chr6_GL000252v2_alt	3220127	3229219	chr6_GL000252v2_alt:3220127-3229219	0	+	3220127	3220127	8553170	3	159,80,443,	0,8367,8649,
#Deleted in new
chr6_GL000252v2_alt	3220155	3230594	chr6_GL000252v2_alt:3220155-3230594	0	+	3220155	3226755	789624	8	131,96,140,98,148,185,199,104,	0,6520,7031,8068,8271,8621,9922,10335,
#Deleted in new
chr6_GL000252v2_alt	3220162	3229219	chr6_GL000252v2_alt:3220162-3229219	0	+	3220162	3220162	8553170	6	124,96,140,98,148,443,	0,6513,7024,8061,8264,8614,
#Deleted in new
chr6_GL000252v2_alt	3220165	3221193	chr6_GL000252v2_alt:3220165-3221193	0	+	3220165	3220165	8553170	2	121,798,	0,230,
#Deleted in new
chr6_GL000252v2_alt	3220329	3229219	chr6_GL000252v2_alt:3220329-3229219	0	+	3220329	3220329	8553170	6	203,96,140,98,148,443,	0,6346,6857,7894,8097,8447,
#Deleted in new
chr6_GL000252v2_alt	3220352	3227635	chr6_GL000252v2_alt:3220352-3227635	0	+	3220352	3220352	8553170	3	180,96,449,	0,6323,6834,
#Deleted in new
chr6_GL000252v2_alt	3220356	3228574	chr6_GL000252v2_alt:3220356-3228574	0	+	3220356	3220356	8553170	5	338,96,140,98,148,	0,6319,6830,7867,8070,
#Deleted in new
chr6_GL000252v2_alt	3228163	3229219	chr6_GL000252v2_alt:3228163-3229219	0	+	3228163	3228163	8553170	2	411,443,	0,613,
#Deleted in new
chr6_GL000252v2_alt	3229796	3250455	chr6_GL000252v2_alt:3229796-3250455	3	+	3229880	3250314	789624	41	149,199,202,71,89,83,97,106,133,116,180,183,186,159,127,75,198,112,71,140,210,52,90,210,76,157,117,172,233,168,60,94,187,91,75,103,90,99,84,133,283,	0,281,694,1105,1254,1561,1814,2049,2252,9169,9384,9709,10024,10363,10773,11067,11402,11691,11893,12222,12475,12929,13082,13307,13696,13932,14184,14406,14806,15121,15682,16791,16982,17283,17464,19030,19298,19473,19754,20100,20376,
#Deleted in new
chr6_GL000252v2_alt	3229829	3250314	chr6_GL000252v2_alt:3229829-3250314	1	+	3229880	3250314	789624	40	116,199,202,71,89,83,97,106,133,116,180,183,186,159,127,75,198,112,71,140,210,52,90,210,76,157,117,172,233,168,60,94,140,75,103,90,99,84,133,142,	0,248,661,1072,1221,1528,1781,2016,2219,9136,9351,9676,9991,10330,10740,11034,11369,11658,11860,12189,12442,12896,13049,13274,13663,13899,14151,14373,14773,15088,15649,16758,16949,17431,18997,19265,19440,19721,20067,20343,
#Deleted in new
chr6_GL000252v2_alt	3230615	3231332	chr6_GL000252v2_alt:3230615-3231332	0	+	3230615	3230615	8553170	2	77,431,	0,286,
#Deleted in new
chr6_GL000252v2_alt	3230653	3232171	chr6_GL000252v2_alt:3230653-3232171	0	+	3230653	3230653	8553170	5	39,71,89,83,123,	0,248,397,704,1395,
#Deleted in new
chr6_GL000252v2_alt	3239950	3241750	chr6_GL000252v2_alt:3239950-3241750	0	+	3239950	3239950	8553170	6	56,159,127,75,198,263,	0,209,619,913,1248,1537,
#Deleted in new
chr6_GL000252v2_alt	3242882	3243394	chr6_GL000252v2_alt:3242882-3243394	0	+	3242882	3242882	8553170	2	86,291,	0,221,
#Deleted in new
chr6_GL000252v2_alt	3243724	3246610	chr6_GL000252v2_alt:3243724-3246610	0	+	3243724	3243724	8553170	7	161,117,172,173,168,60,23,	0,256,478,938,1193,1754,2863,
#Deleted in new
chr6_GL000252v2_alt	3245515	3247493	chr6_GL000252v2_alt:3245515-3247493	0	+	3245515	3245515	8553170	5	23,94,187,91,233,	0,1072,1263,1564,1745,
#Deleted in new
chr6_GL000252v2_alt	3246624	3247304	chr6_GL000252v2_alt:3246624-3247304	0	+	3246624	3246624	8553170	2	57,526,	0,154,
#Deleted in new
chr6_GL000252v2_alt	3246928	3250455	chr6_GL000252v2_alt:3246928-3250455	0	+	3246928	3246928	8553170	8	37,91,75,103,90,99,479,283,	0,151,332,1898,2166,2341,2622,3244,
#Deleted in new
chr6_GL000252v2_alt	3246973	3250455	chr6_GL000252v2_alt:3246973-3250455	0	+	3246973	3246973	8553170	8	197,75,103,90,99,84,133,283,	0,287,1853,2121,2296,2577,2923,3199,
#Deleted in new
chr6_GL000252v2_alt	3247765	3251295	chr6_GL000252v2_alt:3247765-3251295	3	-	3247765	3247765	8553170	2	1577,502,	0,3028,
#Deleted in new
chr6_GL000252v2_alt	3248771	3250455	chr6_GL000252v2_alt:3248771-3250455	0	+	3248771	3248771	8553170	6	158,90,99,84,133,283,	0,323,498,779,1125,1401,
#Deleted in new
chr6_GL000252v2_alt	3248900	3250039	chr6_GL000252v2_alt:3248900-3250039	0	+	3248900	3248900	8553170	2	29,945,	0,194,
#Deleted in new
chr6_GL000252v2_alt	3249033	3249642	chr6_GL000252v2_alt:3249033-3249642	0	+	3249033	3249033	8553170	2	151,373,	0,236,
#Deleted in new
chr6_GL000252v2_alt	3253410	3256226	chr6_GL000252v2_alt:3253410-3256226	7	+	3253410	3253410	16724991	8	877,102,102,87,202,179,104,318,	0,984,1174,1377,1633,2035,2297,2498,
#Deleted in new
chr6_GL000252v2_alt	3253463	3256174	chr6_GL000252v2_alt:3253463-3256174	5	+	3253463	3253463	16724991	10	202,90,147,102,102,87,202,179,104,266,	0,299,677,931,1121,1324,1580,1982,2244,2445,
#Deleted in new
chr6_GL000252v2_alt	3253942	3254879	chr6_GL000252v2_alt:3253942-3254879	3	-	3253942	3254879	789624	2	31,38,	0,899,
#Deleted in new
chr6_GL000252v2_alt	3256388	3260247	chr6_GL000252v2_alt:3256388-3260247	7	-	3256388	3256388	16724991	13	102,164,162,97,152,133,131,144,120,53,123,336,321,	0,422,663,917,1107,1351,1603,1827,2089,2372,2539,2913,3538,
#Deleted in new
chr6_GL000252v2_alt	3261044	3261562	chr6_GL000252v2_alt:3261044-3261562	7	+	3261044	3261044	16724991	3	17,148,46,	0,122,472,
#Deleted in new
chr6_GL000252v2_alt	3262536	3276826	chr6_GL000252v2_alt:3262536-3276826	3	+	3262620	3276685	0	41	149,199,202,71,89,83,97,106,133,116,180,183,186,159,127,75,198,112,71,140,210,52,90,210,76,157,117,172,233,168,60,94,187,91,75,103,90,99,84,133,283,	0,281,694,1105,1254,1561,1814,2049,2252,2801,3016,3341,3656,3995,4405,4699,5034,5323,5525,5854,6107,6561,6714,6939,7328,7564,7816,8038,8437,8752,9313,10422,10613,10914,11095,12661,12929,13104,13385,13731,14007,
#Deleted in new
chr6_GL000252v2_alt	3262620	3276825	chr6_GL000252v2_alt:3262620-3276825	1	+	3262620	3276685	789624	40	65,199,202,71,89,83,97,106,133,116,180,183,186,159,127,75,198,112,71,140,210,52,90,210,76,157,117,172,233,168,60,94,140,75,103,90,99,84,133,282,	0,197,610,1021,1170,1477,1730,1965,2168,2717,2932,3257,3572,3911,4321,4615,4950,5239,5441,5770,6023,6477,6630,6855,7244,7480,7732,7954,8353,8668,9229,10338,10529,11011,12577,12845,13020,13301,13647,13923,
#Deleted in new
chr6_GL000252v2_alt	3263355	3264072	chr6_GL000252v2_alt:3263355-3264072	0	+	3263355	3263355	8553170	2	77,431,	0,286,
#Deleted in new
chr6_GL000252v2_alt	3263393	3264911	chr6_GL000252v2_alt:3263393-3264911	0	+	3263393	3263393	8553170	5	39,71,89,83,123,	0,248,397,704,1395,
#Deleted in new
chr6_GL000252v2_alt	3266322	3268122	chr6_GL000252v2_alt:3266322-3268122	0	+	3266322	3266322	8553170	6	56,159,127,75,198,263,	0,209,619,913,1248,1537,
#Deleted in new
chr6_GL000252v2_alt	3269254	3269766	chr6_GL000252v2_alt:3269254-3269766	0	+	3269254	3269254	8553170	2	86,291,	0,221,
#Deleted in new
chr6_GL000252v2_alt	3270100	3272981	chr6_GL000252v2_alt:3270100-3272981	0	+	3270100	3270100	8553170	7	157,117,172,173,168,60,23,	0,252,474,933,1188,1749,2858,
#Deleted in new
chr6_GL000252v2_alt	3271886	3273864	chr6_GL000252v2_alt:3271886-3273864	0	+	3271886	3271886	8553170	5	23,94,187,91,233,	0,1072,1263,1564,1745,
#Deleted in new
chr6_GL000252v2_alt	3272995	3273675	chr6_GL000252v2_alt:3272995-3273675	0	+	3272995	3272995	8553170	2	57,526,	0,154,
#Deleted in new
chr6_GL000252v2_alt	3273299	3276826	chr6_GL000252v2_alt:3273299-3276826	0	+	3273299	3273299	8553170	8	37,91,75,103,90,99,479,283,	0,151,332,1898,2166,2341,2622,3244,
#Deleted in new
chr6_GL000252v2_alt	3273344	3276826	chr6_GL000252v2_alt:3273344-3276826	0	+	3273344	3273344	8553170	8	197,75,103,90,99,84,133,283,	0,287,1853,2121,2296,2577,2923,3199,
#Deleted in new
chr6_GL000252v2_alt	3274136	3277666	chr6_GL000252v2_alt:3274136-3277666	3	-	3274136	3274136	8553170	2	1577,502,	0,3028,
#Deleted in new
chr6_GL000252v2_alt	3275142	3276826	chr6_GL000252v2_alt:3275142-3276826	0	+	3275142	3275142	8553170	6	158,90,99,84,133,283,	0,323,498,779,1125,1401,
#Deleted in new
chr6_GL000252v2_alt	3275271	3276410	chr6_GL000252v2_alt:3275271-3276410	0	+	3275271	3275271	8553170	2	29,945,	0,194,
#Deleted in new
chr6_GL000252v2_alt	3275404	3276013	chr6_GL000252v2_alt:3275404-3276013	0	+	3275404	3275404	8553170	2	151,373,	0,236,
#Deleted in new
chr6_GL000252v2_alt	3279705	3283050	chr6_GL000252v2_alt:3279705-3283050	3	+	3279830	3282542	789624	10	327,90,155,102,102,87,201,179,104,774,	0,424,796,1058,1248,1451,1707,2108,2370,2571,
#Deleted in new
chr6_GL000252v2_alt	3279723	3280855	chr6_GL000252v2_alt:3279723-3280855	0	+	3279723	3279723	8553170	4	309,44,147,92,	0,406,786,1040,
#Deleted in new
chr6_GL000252v2_alt	3279772	3283050	chr6_GL000252v2_alt:3279772-3283050	0	+	3279772	3279772	8553170	9	447,155,102,62,87,201,179,104,774,	0,729,991,1221,1384,1640,2041,2303,2504,
#Deleted in new
chr6_GL000252v2_alt	3279772	3283050	chr6_GL000252v2_alt:3279772-3283050	0	+	3279772	3279772	8553170	8	447,155,102,102,87,179,104,774,	0,729,991,1181,1384,2041,2303,2504,
#Deleted in new
chr6_GL000252v2_alt	3279772	3283050	chr6_GL000252v2_alt:3279772-3283050	0	+	3279772	3279772	8553170	9	260,90,155,102,102,87,201,366,774,	0,357,729,991,1181,1384,1640,2041,2504,
#Deleted in new
chr6_GL000252v2_alt	3279777	3283050	chr6_GL000252v2_alt:3279777-3283050	0	+	3279777	3279777	8553170	9	442,174,102,102,87,201,179,104,774,	0,705,986,1176,1379,1635,2036,2298,2499,
#Deleted in new
chr6_GL000252v2_alt	3279822	3283078	chr6_GL000252v2_alt:3279822-3283078	1	+	3279830	3282542	0	9	210,155,102,102,87,201,179,104,802,	0,679,941,1131,1334,1590,1991,2253,2454,
#Deleted in new
chr6_GL000252v2_alt	3279822	3280959	chr6_GL000252v2_alt:3279822-3280959	0	+	3279822	3279822	8553170	5	210,90,174,102,6,	0,307,660,941,1131,
#Deleted in new
chr6_GL000252v2_alt	3279822	3280891	chr6_GL000252v2_alt:3279822-3280891	0	+	3279822	3279822	8553170	4	210,90,155,128,	0,307,679,941,
#Deleted in new
chr6_GL000252v2_alt	3279822	3280523	chr6_GL000252v2_alt:3279822-3280523	0	+	3279822	3279822	8553170	2	210,394,	0,307,
#Deleted in new
chr6_GL000252v2_alt	3282562	3287537	chr6_GL000252v2_alt:3282562-3287537	0	-	3282562	3282562	8553170	13	296,164,162,97,152,133,131,144,120,144,123,336,1123,	0,616,857,1111,1301,1545,1797,2021,2283,2595,2853,3227,3852,
#Deleted in new
chr6_GL000252v2_alt	3282562	3350740	chr6_GL000252v2_alt:3282562-3350740	1	-	3282756	3339585	789624	44	296,164,162,97,152,133,131,144,120,144,123,336,321,282,279,288,318,291,324,291,324,318,333,324,327,297,324,318,315,309,288,309,306,333,306,291,297,369,264,157,116,1839,411,194,	0,616,857,1111,1301,1545,1797,2021,2283,2595,2853,3227,3852,5021,6580,7209,8116,8844,11517,12235,14698,15433,16903,20242,21002,23666,26503,27232,27664,28395,28969,30833,32490,37877,40211,40879,43244,44581,47613,48051,53902,54435,56620,67984,
#Deleted in new
chr6_GL000252v2_alt	3282562	3288016	chr6_GL000252v2_alt:3282562-3288016	0	-	3282562	3282562	8553170	14	296,164,162,97,152,133,131,144,120,144,123,336,321,433,	0,616,857,1111,1301,1545,1797,2021,2283,2595,2853,3227,3852,5021,
#Deleted in new
chr6_GL000252v2_alt	3282562	3350740	chr6_GL000252v2_alt:3282562-3350740	3	-	3282756	3339585	789624	44	296,164,162,97,152,133,131,144,120,144,123,336,321,282,279,288,318,324,324,318,324,318,333,324,327,297,324,318,315,309,288,309,306,333,306,291,297,369,264,157,116,1839,411,194,	0,616,857,1111,1301,1545,1797,2021,2283,2595,2853,3227,3852,5021,6580,7209,8116,8844,11517,12235,14698,15433,16903,20242,21002,23666,26503,27232,27664,28395,28969,30833,32490,37877,40211,40879,43244,44581,47613,48051,53902,54435,56620,67984,
#Deleted in new
chr6_GL000252v2_alt	3283673	3284861	chr6_GL000252v2_alt:3283673-3284861	0	-	3283673	3283673	8553170	5	97,152,383,144,16,	0,190,434,910,1172,
#Deleted in new
chr6_GL000252v2_alt	3319914	3320035	chr6_GL000252v2_alt:3319914-3320035	3	-	3319914	3319914	8553170	1	121,	0,
#Deleted in new
chr6_GL000252v2_alt	3336965	3350587	chr6_GL000252v2_alt:3336965-3350587	0	-	3336965	3336965	8553170	2	2628,41,	0,13581,
#Deleted in new
chr6_GL000252v2_alt	3339562	3356700	chr6_GL000252v2_alt:3339562-3356700	0	-	3339562	3339585	789624	2	31,341,	0,16797,
#Deleted in new
chr6_GL000252v2_alt	3339562	3358976	chr6_GL000252v2_alt:3339562-3358976	0	-	3339562	3339562	8553170	5	31,112,71,82,24,	0,18507,18840,19126,19390,
#Deleted in new
chr6_GL000252v2_alt	3356629	3369604	chr6_GL000252v2_alt:3356629-3369604	1	-	3357104	3369571	789624	18	705,85,112,71,82,108,180,92,186,134,132,136,86,136,92,79,80,124,	0,1216,1440,1773,2059,2323,2595,3511,3692,4560,5507,5725,5999,10851,11837,12176,12405,12851,
#Deleted in new
chr6_GL000252v2_alt	3356629	3369617	chr6_GL000252v2_alt:3356629-3369617	1	-	3357104	3369571	789624	18	705,85,112,71,82,108,180,92,186,134,132,136,86,136,92,79,80,128,	0,1216,1440,1773,2059,2323,2595,3511,3692,4560,5507,5725,5999,10851,11837,12176,12405,12860,
#Deleted in new
chr6_GL000252v2_alt	3358073	3359257	chr6_GL000252v2_alt:3358073-3359257	0	-	3358073	3359257	789624	5	108,94,82,108,33,	0,329,615,879,1151,
#Deleted in new
chr6_GL000252v2_alt	3360142	3361385	chr6_GL000252v2_alt:3360142-3361385	2	-	3360142	3360142	8553170	2	365,196,	0,1047,
#Deleted in new
chr6_GL000252v2_alt	3360196	3361786	chr6_GL000252v2_alt:3360196-3361786	0	-	3360196	3360196	8553170	3	36,186,597,	0,125,993,
#Deleted in new
chr6_GL000252v2_alt	3361807	3369586	chr6_GL000252v2_alt:3361807-3369586	0	-	3361807	3361807	8553170	8	461,136,86,136,92,79,80,106,	0,547,821,5673,6659,6998,7227,7673,
#Deleted in new
chr6_GL000252v2_alt	3361874	3369131	chr6_GL000252v2_alt:3361874-3369131	0	-	3361874	3361874	8553170	7	394,136,86,136,92,79,97,	0,480,754,5606,6592,6931,7160,
#Deleted in new
chr6_GL000252v2_alt	3367405	3369582	chr6_GL000252v2_alt:3367405-3369582	0	-	3367405	3367405	8553170	5	211,92,79,80,102,	0,1061,1400,1629,2075,
#Deleted in new
chr6_GL000252v2_alt	3370070	3371655	chr6_GL000252v2_alt:3370070-3371655	3	-	3370094	3371144	789624	2	1148,197,	0,1388,
#Deleted in new
chr6_GL000252v2_alt	3389721	3394448	chr6_GL000252v2_alt:3389721-3394448	3	-	3390584	3393467	789624	6	1040,186,216,91,81,112,	0,1178,2009,3450,3738,4615,
#Deleted in new
chr6_GL000252v2_alt	3389721	3393315	chr6_GL000252v2_alt:3389721-3393315	1	-	3390584	3393190	789624	4	1040,186,539,144,	0,1178,2009,3450,
#Deleted in new
chr6_GL000252v2_alt	3389721	3391220	chr6_GL000252v2_alt:3389721-3391220	0	-	3389721	3389721	8553170	2	1040,321,	0,1178,
#Deleted in new
chr6_GL000252v2_alt	3389721	3393286	chr6_GL000252v2_alt:3389721-3393286	0	-	3389721	3389721	8553170	3	1040,186,1556,	0,1178,2009,
#Deleted in new
chr6_GL000252v2_alt	3389721	3393300	chr6_GL000252v2_alt:3389721-3393300	0	-	3389721	3389721	8553170	3	1040,186,129,	0,1178,3450,
#Deleted in new
chr6_GL000252v2_alt	3391857	3395738	chr6_GL000252v2_alt:3391857-3395738	0	-	3391857	3393467	789624	5	89,91,81,100,136,	0,1314,1602,3244,3745,
#Deleted in new
chr6_GL000252v2_alt	3393345	3395325	chr6_GL000252v2_alt:3393345-3395325	0	-	3393345	3393345	8553170	3	195,201,224,	0,991,1756,
#Deleted in new
chr6_GL000252v2_alt	3394166	3395698	chr6_GL000252v2_alt:3394166-3395698	0	-	3394166	3394166	789624	3	371,100,96,	0,935,1436,
#Deleted in new
chr6_GL000252v2_alt	3394166	3395273	chr6_GL000252v2_alt:3394166-3395273	0	-	3394166	3394166	8553170	2	371,172,	0,935,
#Deleted in new
chr6_GL000252v2_alt	3394166	3395730	chr6_GL000252v2_alt:3394166-3395730	0	-	3394166	3394166	789624	3	371,100,77,	0,935,1487,
#Deleted in new
chr6_GL000252v2_alt	3394704	3395704	chr6_GL000252v2_alt:3394704-3395704	0	-	3394704	3394704	789624	3	320,71,102,	0,426,898,
#Deleted in new
chr6_GL000252v2_alt	3394749	3395691	chr6_GL000252v2_alt:3394749-3395691	0	-	3394749	3394749	789624	3	275,71,158,	0,381,784,
#Deleted in new
chr6_GL000252v2_alt	3394805	3397353	chr6_GL000252v2_alt:3394805-3397353	0	+	3395959	3397353	789624	6	196,209,191,154,96,108,	0,755,1146,1589,2257,2440,
#Deleted in new
chr6_GL000252v2_alt	3394887	3399299	chr6_GL000252v2_alt:3394887-3399299	0	+	3394991	3399299	789624	7	114,191,154,96,108,84,85,	0,1064,1507,2175,2358,4124,4327,
#Deleted in new
chr6_GL000252v2_alt	3394906	3399224	chr6_GL000252v2_alt:3394906-3399224	0	+	3394906	3394906	8553170	6	95,191,96,108,84,10,	0,1045,2156,2339,4105,4308,
#Deleted in new
chr6_GL000252v2_alt	3394941	3399299	chr6_GL000252v2_alt:3394941-3399299	2	+	3395959	3399299	789624	8	60,406,191,154,96,108,84,85,	0,422,1010,1453,2121,2304,4070,4273,
#Deleted in new
chr6_GL000252v2_alt	3395209	3399299	chr6_GL000252v2_alt:3395209-3399299	1	+	3395959	3399299	789624	7	560,191,154,96,108,84,85,	0,742,1185,1853,2036,3802,4005,
#Deleted in new
chr6_GL000252v2_alt	3395459	3399299	chr6_GL000252v2_alt:3395459-3399299	0	+	3395959	3399299	789624	7	300,191,154,96,108,84,85,	0,492,935,1603,1786,3552,3755,
#Deleted in new
chr6_GL000252v2_alt	3395502	3399299	chr6_GL000252v2_alt:3395502-3399299	0	+	3395959	3399299	789624	7	109,191,154,96,108,84,85,	0,449,892,1560,1743,3509,3712,
#Deleted in new
chr6_GL000252v2_alt	3395531	3399299	chr6_GL000252v2_alt:3395531-3399299	0	+	3395959	3399299	789624	6	238,191,16,108,84,85,	0,420,1611,1714,3480,3683,
#Deleted in new
chr6_GL000252v2_alt	3395561	3399095	chr6_GL000252v2_alt:3395561-3399095	0	+	3395561	3395561	8553170	6	208,191,154,16,108,84,	0,390,833,1581,1684,3450,
#Deleted in new
chr6_GL000252v2_alt	3395586	3399299	chr6_GL000252v2_alt:3395586-3399299	0	+	3395959	3399299	789624	7	183,191,154,96,108,84,85,	0,365,808,1476,1659,3425,3628,
#Deleted in new
chr6_GL000252v2_alt	3395830	3399071	chr6_GL000252v2_alt:3395830-3399071	0	+	3395959	3399071	0	5	312,154,96,108,60,	0,564,1232,1415,3181,
#Deleted in new
chr6_GL000252v2_alt	3395842	3397158	chr6_GL000252v2_alt:3395842-3397158	0	+	3395959	3397158	789624	2	300,96,	0,1220,
#Deleted in new
chr6_GL000252v2_alt	3396382	3397134	chr6_GL000252v2_alt:3396382-3397134	0	+	3396382	3396382	8553170	2	166,72,	0,680,
#Deleted in new
chr6_GL000252v2_alt	3398485	3399299	chr6_GL000252v2_alt:3398485-3399299	0	+	3398485	3398485	8553170	2	610,85,	0,729,
#Deleted in new
chr6_GL000252v2_alt	3398864	3399697	chr6_GL000252v2_alt:3398864-3399697	0	+	3398864	3398864	8553170	2	231,483,	0,350,
#Deleted in new
chr6_GL000252v2_alt	3399017	3399299	chr6_GL000252v2_alt:3399017-3399299	0	+	3399017	3399299	789624	2	78,85,	0,197,
#Deleted in new
chr6_GL000252v2_alt	3534136	3613021	chr6_GL000252v2_alt:3534136-3613021	1	-	3534419	3612820	789624	26	1338,15,21,21,21,21,21,24,24,21,21,21,21,21,21,39,21,21,21,21,21,30,33,33,87,214,	0,7225,7983,9931,23719,29810,30441,30915,31984,37919,39361,42764,43239,43942,46306,46928,50566,56716,62096,62621,73151,73257,74920,75776,76893,78671,
#Deleted in new
chr6_GL000252v2_alt	3534136	3612993	chr6_GL000252v2_alt:3534136-3612993	1	-	3534419	3612820	789624	23	1338,15,21,21,21,21,24,21,21,21,21,21,21,39,90,21,21,21,30,33,33,87,186,	0,7225,7983,9931,29810,30441,30915,37919,39361,42764,43239,43942,46306,46928,56716,62096,62621,73151,73257,74920,75776,76893,78671,
#Deleted in new
chr6_GL000252v2_alt	3534394	3612820	chr6_GL000252v2_alt:3534394-3612820	3	-	3534394	3612820	789624	34	69,636,69,296,15,21,21,21,21,21,18,5,24,13,9,11,8,21,23,21,21,39,21,21,21,17,5,21,9,17,33,33,87,13,	0,73,713,784,6967,7725,9673,23461,29552,30183,30659,30926,31726,35521,37044,38752,39116,42506,42981,43684,46048,46670,50308,56458,61838,62363,63556,72893,72999,73012,74662,75518,76635,78413,
#Deleted in new
chr6_GL000252v2_alt	3534419	3612820	chr6_GL000252v2_alt:3534419-3612820	1	-	3534419	3612820	789624	24	1055,15,21,21,21,21,21,24,21,21,21,21,21,21,39,21,21,21,21,30,33,33,87,13,	0,6942,7700,9648,23436,29527,30158,30632,37636,39078,42481,42956,43659,46023,46645,50283,56433,61813,62338,72974,74637,75493,76610,78388,
#Deleted in new
chr6_GL000252v2_alt	3534419	3612820	chr6_GL000252v2_alt:3534419-3612820	1	-	3534419	3612820	789624	23	1055,15,21,21,21,21,24,21,21,21,21,21,21,39,90,21,21,21,30,33,33,87,13,	0,6942,7700,9648,22814,30158,30632,37636,39078,42481,42956,43659,46023,46645,56433,61813,62338,72868,72974,74637,75493,76610,78388,
#Deleted in new
chr6_GL000252v2_alt	3534419	3612820	chr6_GL000252v2_alt:3534419-3612820	1	-	3534419	3612820	789624	26	1055,15,21,21,21,21,21,21,24,21,21,21,21,21,21,39,21,21,21,21,21,30,33,33,87,13,	0,6942,7700,9648,22814,23436,29527,30158,30632,37636,39078,42481,42956,43659,46023,46645,50283,56433,61813,62338,72868,72974,74637,75493,76610,78388,
#Deleted in new
chr6_GL000252v2_alt	3566683	3567643	chr6_GL000252v2_alt:3566683-3567643	7	+	3566683	3566683	16724991	1	960,	0,
#Deleted in new
chr6_GL000252v2_alt	3593989	3594096	chr6_GL000252v2_alt:3593989-3594096	3	+	3593989	3593989	8553170	1	107,	0,
#Deleted in new
chr6_GL000252v2_alt	3631600	3634777	chr6_GL000252v2_alt:3631600-3634777	3	+	3631600	3631600	789624	3	244,128,238,	0,1103,2939,
#Deleted in new
chr6_GL000252v2_alt	3635053	3648208	chr6_GL000252v2_alt:3635053-3648208	3	-	3635059	3648201	789624	7	95,282,348,21,282,348,86,	0,781,2076,7808,8958,10962,13069,
#Deleted in new
chr6_GL000252v2_alt	3635826	3648201	chr6_GL000252v2_alt:3635826-3648201	0	-	3642866	3648201	789624	5	290,344,21,112,79,	0,1307,7035,10425,12296,
#Deleted in new
chr6_GL000252v2_alt	3635826	3648201	chr6_GL000252v2_alt:3635826-3648201	1	-	3635826	3648201	789624	4	290,348,21,79,	0,1303,7035,12296,
#Deleted in new
chr6_GL000252v2_alt	3635826	3648201	chr6_GL000252v2_alt:3635826-3648201	1	-	3635826	3648201	789624	6	290,348,21,282,348,79,	0,1303,7035,8185,10189,12296,
#Deleted in new
chr6_GL000252v2_alt	3635826	3648201	chr6_GL000252v2_alt:3635826-3648201	1	-	3635826	3637376	789624	5	290,348,21,107,79,	0,1303,7035,10430,12296,
#Deleted in new
chr6_GL000252v2_alt	3646113	3648208	chr6_GL000252v2_alt:3646113-3648208	0	-	3646113	3648201	789624	2	247,86,	0,2009,
#Deleted in new
chr6_GL000252v2_alt	3680146	3685357	chr6_GL000252v2_alt:3680146-3685357	3	+	3680255	3684213	0	5	191,246,282,166,395,	0,2604,3341,3912,4816,
#Deleted in new
chr6_GL000252v2_alt	3680176	3683500	chr6_GL000252v2_alt:3680176-3683500	0	+	3680176	3680176	8553170	3	161,117,13,	0,2703,3311,
#Deleted in new
chr6_GL000252v2_alt	3680228	3685357	chr6_GL000252v2_alt:3680228-3685357	1	+	3680255	3684213	789624	5	109,246,207,166,395,	0,2522,3334,3830,4734,
#Deleted in new
chr6_GL000252v2_alt	3700109	3713765	chr6_GL000252v2_alt:3700109-3713765	7	-	3700109	3700109	16724991	2	267,76,	0,13580,
#Deleted in new
chr6_GL000252v2_alt	3726002	3726098	chr6_GL000252v2_alt:3726002-3726098	7	-	3726002	3726002	16724991	1	96,	0,
#Deleted in new
chr6_GL000252v2_alt	3767140	3767548	chr6_GL000252v2_alt:3767140-3767548	7	-	3767140	3767140	16724991	1	408,	0,
#Deleted in new
chr6_GL000252v2_alt	3769855	3789002	chr6_GL000252v2_alt:3769855-3789002	7	-	3769855	3769855	16724991	5	38,111,284,264,100,	0,811,1624,9986,19047,
#Deleted in new
chr6_GL000252v2_alt	3772702	3773834	chr6_GL000252v2_alt:3772702-3773834	7	+	3772702	3772702	16724991	1	1132,	0,
#Deleted in new
chr6_GL000252v2_alt	3812001	3812150	chr6_GL000252v2_alt:3812001-3812150	3	-	3812001	3812001	8553170	1	149,	0,
#Deleted in new
chr6_GL000252v2_alt	3814542	3830112	chr6_GL000252v2_alt:3814542-3830112	3	-	3814861	3830052	789624	6	333,24,111,282,270,160,	0,1055,1554,2361,4857,15410,
#Deleted in new
chr6_GL000252v2_alt	3816905	3848645	chr6_GL000252v2_alt:3816905-3848645	0	-	3816905	3816905	8553170	4	280,270,151,50,	0,2494,29794,31690,
#Deleted in new
chr6_GL000252v2_alt	3872102	3881450	chr6_GL000252v2_alt:3872102-3881450	0	+	3881377	3881450	789624	4	92,151,166,111,	0,3753,4555,9237,
#Deleted in new
chr6_GL000252v2_alt	3881275	3887486	chr6_GL000252v2_alt:3881275-3887486	1	+	3881377	3886600	789624	5	184,246,282,175,707,	0,3878,4536,5170,5504,
#Deleted in new
chr6_GL000252v2_alt	3881275	3887486	chr6_GL000252v2_alt:3881275-3887486	3	+	3881377	3886600	789624	5	184,246,282,175,495,	0,3878,4536,5170,5716,
#Deleted in new
chr6_GL000252v2_alt	3881319	3887486	chr6_GL000252v2_alt:3881319-3887486	1	+	3881377	3886600	789624	5	140,246,282,175,360,	0,3834,4492,5126,5807,
#Deleted in new
chr6_GL000252v2_alt	3881324	3886809	chr6_GL000252v2_alt:3881324-3886809	0	+	3881324	3881324	8553170	4	135,246,282,30,	0,3829,4487,5455,
#Deleted in new
chr6_GL000252v2_alt	3881327	3886642	chr6_GL000252v2_alt:3881327-3886642	1	+	3881428	3886642	789624	4	132,246,282,11,	0,3826,4484,5304,
#Deleted in new
chr6_GL000252v2_alt	3881338	3886845	chr6_GL000252v2_alt:3881338-3886845	1	+	3881377	3886600	789624	4	121,246,282,400,	0,3815,4473,5107,
#Deleted in new
chr6_GL000252v2_alt	3881342	3886080	chr6_GL000252v2_alt:3881342-3886080	0	+	3881342	3881342	8553170	3	117,246,367,	0,3811,4371,
#Deleted in new
chr6_GL000252v2_alt	3881345	3887106	chr6_GL000252v2_alt:3881345-3887106	0	+	3881377	3883072	789624	6	114,956,246,282,175,327,	0,1461,3808,4466,5100,5434,
#Deleted in new
chr6_GL000252v2_alt	3881349	3894456	chr6_GL000252v2_alt:3881349-3894456	0	+	3881349	3881349	8553170	3	110,246,8645,	0,3804,4462,
#Deleted in new
chr6_GL000252v2_alt	3885153	3887106	chr6_GL000252v2_alt:3885153-3887106	0	+	3885153	3885153	8553170	3	246,282,115,	0,658,1838,
#Deleted in new
chr6_GL000252v2_alt	3900295	3907665	chr6_GL000252v2_alt:3900295-3907665	1	-	3901064	3907455	789624	6	783,24,111,282,270,319,	0,1393,1899,2525,5337,7051,
#Deleted in new
chr6_GL000252v2_alt	3900295	3907542	chr6_GL000252v2_alt:3900295-3907542	1	-	3901064	3907455	0	5	783,111,282,270,196,	0,1899,2525,5337,7051,
#Deleted in new
chr6_GL000252v2_alt	3900295	3910237	chr6_GL000252v2_alt:3900295-3910237	3	-	3901064	3907455	0	6	783,111,282,270,172,116,	0,1899,2525,5337,7051,9826,
#Deleted in new
chr6_GL000252v2_alt	3900295	3907500	chr6_GL000252v2_alt:3900295-3907500	1	-	3901064	3907455	789624	3	783,282,154,	0,2525,7051,
#Deleted in new
chr6_GL000252v2_alt	3900295	3907495	chr6_GL000252v2_alt:3900295-3907495	1	-	3901064	3907455	789624	4	783,282,270,149,	0,2525,5337,7051,
#Deleted in new
chr6_GL000252v2_alt	3900295	3907486	chr6_GL000252v2_alt:3900295-3907486	0	-	3900295	3900295	8553170	3	783,3708,140,	0,1899,7051,
#Deleted in new
chr6_GL000252v2_alt	3900295	3907486	chr6_GL000252v2_alt:3900295-3907486	0	-	3902907	3907455	789624	5	783,111,119,270,140,	0,1899,2525,5337,7051,
#Deleted in new
chr6_GL000252v2_alt	3900708	3901559	chr6_GL000252v2_alt:3900708-3901559	3	+	3900708	3900708	789624	2	177,376,	0,475,
#Deleted in new
chr6_GL000252v2_alt	3900714	3903303	chr6_GL000252v2_alt:3900714-3903303	3	-	3900714	3900714	8553170	2	213,97,	0,2492,
#Deleted in new
chr6_GL000252v2_alt	3900714	3901269	chr6_GL000252v2_alt:3900714-3901269	0	-	3900714	3900714	8553170	2	364,64,	0,491,
#Deleted in new
chr6_GL000252v2_alt	3902855	3907505	chr6_GL000252v2_alt:3902855-3907505	0	-	3902855	3907455	789624	3	247,136,101,	0,2777,4549,
#Deleted in new
chr6_GL000252v2_alt	3950726	3951559	chr6_GL000252v2_alt:3950726-3951559	7	-	3950726	3950726	16724991	1	833,	0,
#Deleted in new
chr6_GL000252v2_alt	3962110	3962937	chr6_GL000252v2_alt:3962110-3962937	0	+	3962110	3962110	8553170	2	143,242,	0,585,
#Deleted in new
chr6_GL000252v2_alt	3962135	3962942	chr6_GL000252v2_alt:3962135-3962942	3	+	3962135	3962135	8553170	3	118,35,247,	0,376,560,
#Deleted in new
chr6_GL000252v2_alt	3962490	3962945	chr6_GL000252v2_alt:3962490-3962945	0	+	3962490	3962490	8553170	2	56,250,	0,205,
#Deleted in new
chr6_GL000252v2_alt	3975517	3976454	chr6_GL000252v2_alt:3975517-3976454	7	-	3975517	3975517	16724991	2	80,276,	0,661,
#Deleted in new
chr6_GL000252v2_alt	3986112	3991965	chr6_GL000252v2_alt:3986112-3991965	3	+	3986198	3991152	789624	5	168,249,282,174,627,	0,3804,4436,4885,5226,
#Deleted in new
chr6_GL000252v2_alt	3986198	3991152	chr6_GL000252v2_alt:3986198-3991152	1	+	3986198	3991152	789624	4	82,249,282,155,	0,3718,4350,4799,
#Deleted in new
chr6_GL000252v2_alt	4000853	4008249	chr6_GL000252v2_alt:4000853-4008249	1	-	4001208	4008241	789624	5	369,24,282,267,117,	0,1185,2756,5565,7279,
#Deleted in new
chr6_GL000252v2_alt	4000853	4008293	chr6_GL000252v2_alt:4000853-4008293	3	-	4001208	4008241	789624	6	369,24,111,282,267,161,	0,1185,1678,2756,5565,7279,
#Deleted in new
chr6_GL000252v2_alt	4000854	4008291	chr6_GL000252v2_alt:4000854-4008291	1	-	4001991	4008241	789624	5	1208,111,282,267,159,	0,1677,2755,5564,7278,
#Deleted in new
chr6_GL000252v2_alt	4001143	4008225	chr6_GL000252v2_alt:4001143-4008225	0	-	4001208	4008225	789624	4	79,282,267,93,	0,2466,5275,6989,
#Deleted in new
chr6_GL000252v2_alt	4056480	4060766	chr6_GL000252v2_alt:4056480-4060766	3	-	4056933	4060669	0	6	489,32,111,282,270,188,	0,677,960,1557,2281,4098,
#Deleted in new
chr6_GL000252v2_alt	4056480	4060694	chr6_GL000252v2_alt:4056480-4060694	0	-	4058893	4060669	789624	6	489,32,111,282,158,116,	0,677,960,1557,2281,4098,
#Deleted in new
chr6_GL000252v2_alt	4056764	4060706	chr6_GL000252v2_alt:4056764-4060706	0	-	4056764	4056764	8553170	5	205,32,879,270,128,	0,393,676,1997,3814,
#Deleted in new
chr6_GL000252v2_alt	4058087	4060628	chr6_GL000252v2_alt:4058087-4060628	0	-	4058087	4060628	789624	3	223,270,50,	0,674,2491,
#Deleted in new
chr6_GL000252v2_alt	4065550	4082295	chr6_GL000252v2_alt:4065550-4082295	3	-	4066006	4081804	0	12	486,137,160,174,189,129,198,206,131,115,497,75,	0,7420,7950,8287,8638,10353,10647,13174,13663,15557,15761,16670,
#Deleted in new
chr6_GL000252v2_alt	4069158	4082348	chr6_GL000252v2_alt:4069158-4082348	1	-	4072425	4081804	789624	12	3447,137,160,174,189,129,198,206,131,115,497,128,	0,3812,4342,4679,5030,6745,7039,9566,10055,11949,12153,13062,
#Deleted in new
chr6_GL000252v2_alt	4072514	4074298	chr6_GL000252v2_alt:4072514-4074298	0	-	4072514	4072514	8553170	4	91,137,160,461,	0,456,986,1323,
#Deleted in new
chr6_GL000252v2_alt	4075865	4076304	chr6_GL000252v2_alt:4075865-4076304	0	-	4075865	4075865	8553170	2	167,107,	0,332,
#Deleted in new
chr6_GL000252v2_alt	4084286	4088273	chr6_GL000252v2_alt:4084286-4088273	1	-	4084528	4087983	0	6	331,205,130,112,148,425,	0,814,1417,1955,2225,3562,
#Deleted in new
chr6_GL000252v2_alt	4084286	4087617	chr6_GL000252v2_alt:4084286-4087617	3	-	4084528	4087566	789624	6	331,205,130,112,148,198,	0,814,1417,1955,2225,3133,
#Deleted in new
chr6_GL000252v2_alt	4084286	4087590	chr6_GL000252v2_alt:4084286-4087590	1	-	4084528	4087566	789624	6	331,205,130,40,148,171,	0,814,1417,1955,2225,3133,
#Deleted in new
chr6_GL000252v2_alt	4084286	4085604	chr6_GL000252v2_alt:4084286-4085604	0	-	4084286	4084286	8553170	2	331,504,	0,814,
#Deleted in new
chr6_GL000252v2_alt	4084590	4088221	chr6_GL000252v2_alt:4084590-4088221	0	-	4084590	4084590	8553170	5	27,205,130,418,373,	0,510,1113,1651,3258,
#Deleted in new
chr6_GL000252v2_alt	4087655	4090065	chr6_GL000252v2_alt:4087655-4090065	3	+	4087655	4087655	789624	2	189,1078,	0,1332,
#Deleted in new
chr6_GL000252v2_alt	4087677	4089389	chr6_GL000252v2_alt:4087677-4089389	0	+	4087677	4087677	8553170	3	167,301,490,	0,462,1222,
#Deleted in new
chr6_GL000252v2_alt	4087702	4089556	chr6_GL000252v2_alt:4087702-4089556	0	+	4087702	4087702	789624	3	142,226,569,	0,512,1285,
#Deleted in new
chr6_GL000252v2_alt	4087702	4089780	chr6_GL000252v2_alt:4087702-4089780	0	+	4087702	4087702	789624	3	142,61,793,	0,677,1285,
#Deleted in new
chr6_GL000252v2_alt	4087703	4089265	chr6_GL000252v2_alt:4087703-4089265	0	+	4087703	4087703	8553170	2	737,278,	0,1284,
#Deleted in new
chr6_GL000252v2_alt	4087705	4103155	chr6_GL000252v2_alt:4087705-4103155	1	+	4099717	4103102	789624	6	139,68,132,130,142,181,	0,12003,13127,13869,14228,15269,
#Deleted in new
chr6_GL000252v2_alt	4087707	4089648	chr6_GL000252v2_alt:4087707-4089648	0	+	4087707	4087707	8553170	2	137,749,	0,1192,
#Deleted in new
chr6_GL000252v2_alt	4088405	4102007	chr6_GL000252v2_alt:4088405-4102007	0	+	4099717	4102007	789624	5	35,68,132,130,74,	0,11303,12427,13169,13528,
#Deleted in new
chr6_GL000252v2_alt	4088778	4097548	chr6_GL000252v2_alt:4088778-4097548	3	-	4089148	4097386	0	11	577,137,163,174,189,129,198,206,131,115,940,	0,1859,2304,2710,3443,3781,5109,5733,6900,7179,7830,
#Deleted in new
chr6_GL000252v2_alt	4088778	4093710	chr6_GL000252v2_alt:4088778-4093710	0	-	4088778	4088778	8553170	5	577,137,163,174,1489,	0,1859,2304,2710,3443,
#Deleted in new
chr6_GL000252v2_alt	4089244	4091800	chr6_GL000252v2_alt:4089244-4091800	0	-	4089244	4089244	8553170	3	111,608,312,	0,1393,2244,
#Deleted in new
chr6_GL000252v2_alt	4097717	4102470	chr6_GL000252v2_alt:4097717-4102470	0	+	4097717	4097717	8553170	3	142,1996,537,	0,1991,4216,
#Deleted in new
chr6_GL000252v2_alt	4097730	4103155	chr6_GL000252v2_alt:4097730-4103155	1	+	4097799	4103102	0	6	129,68,132,130,142,181,	0,1978,3102,3844,4203,5244,
#Deleted in new
chr6_GL000252v2_alt	4097797	4123110	chr6_GL000252v2_alt:4097797-4123110	3	+	4097799	4123009	789624	6	62,68,130,142,93,145,	0,1911,3777,4136,22781,25168,
#Deleted in new
chr6_GL000252v2_alt	4099667	4102292	chr6_GL000252v2_alt:4099667-4102292	0	+	4099667	4099667	8553170	4	109,132,130,359,	0,1165,1907,2266,
#Deleted in new
chr6_GL000252v2_alt	4122693	4123371	chr6_GL000252v2_alt:4122693-4123371	7	-	4122693	4122693	16724991	1	678,	0,
#Deleted in new
chr6_GL000252v2_alt	4122738	4123356	chr6_GL000252v2_alt:4122738-4123356	5	-	4122738	4122738	16724991	1	618,	0,
#Deleted in new
chr6_GL000252v2_alt	4139933	4140008	chr6_GL000252v2_alt:4139933-4140008	7	+	4139933	4139933	16724991	1	75,	0,
#Deleted in new
chr6_GL000252v2_alt	4178157	4180968	chr6_GL000252v2_alt:4178157-4180968	0	-	4178499	4180968	789624	3	359,36,268,	0,713,2543,
#Deleted in new
chr6_GL000252v2_alt	4178157	4184599	chr6_GL000252v2_alt:4178157-4184599	1	-	4178499	4184336	0	6	359,36,117,285,282,318,	0,713,907,2543,4055,6124,
#Deleted in new
chr6_GL000252v2_alt	4178157	4184550	chr6_GL000252v2_alt:4178157-4184550	1	-	4178516	4184336	789624	5	390,121,285,282,269,	0,903,2543,4055,6124,
#Deleted in new
chr6_GL000252v2_alt	4178157	4182217	chr6_GL000252v2_alt:4178157-4182217	0	-	4178499	4182217	789624	4	359,117,285,5,	0,907,2543,4055,
#Deleted in new
chr6_GL000252v2_alt	4178157	4184513	chr6_GL000252v2_alt:4178157-4184513	0	-	4178157	4178157	8553170	2	4337,232,	0,6124,
#Deleted in new
chr6_GL000252v2_alt	4178157	4180415	chr6_GL000252v2_alt:4178157-4180415	0	-	4178157	4178157	8553170	3	359,36,1351,	0,713,907,
#Deleted in new
chr6_GL000252v2_alt	4178157	4180430	chr6_GL000252v2_alt:4178157-4180430	0	-	4178157	4178157	8553170	2	359,1560,	0,713,
#Deleted in new
chr6_GL000252v2_alt	4180892	4196655	chr6_GL000252v2_alt:4180892-4196655	2	-	4180892	4196569	789624	4	93,282,63,174,	0,1320,3389,15589,
#Deleted in new
chr6_GL000252v2_alt	4192142	4193204	chr6_GL000252v2_alt:4192142-4193204	0	-	4192142	4192142	8553170	2	259,401,	0,661,
#Deleted in new
chr6_GL000252v2_alt	4192142	4196641	chr6_GL000252v2_alt:4192142-4196641	0	-	4192142	4192142	8553170	4	259,126,1193,160,	0,664,1001,4339,
#Deleted in new
chr6_GL000252v2_alt	4192149	4196641	chr6_GL000252v2_alt:4192149-4196641	1	-	4192396	4196569	789624	5	252,129,177,285,160,	0,654,994,1902,4332,
#Deleted in new
chr6_GL000252v2_alt	4192149	4196655	chr6_GL000252v2_alt:4192149-4196655	3	-	4192396	4196569	789624	5	252,129,279,285,174,	0,654,994,1902,4332,
#Deleted in new
chr6_GL000252v2_alt	4192149	4196594	chr6_GL000252v2_alt:4192149-4196594	1	-	4192396	4196569	789624	4	252,129,279,113,	0,654,994,4332,
#Deleted in new
chr6_GL000252v2_alt	4192270	4194336	chr6_GL000252v2_alt:4192270-4194336	0	-	4192270	4192270	8553170	4	131,129,15,285,	0,533,873,1781,
#Deleted in new
chr6_GL000252v2_alt	4192303	4193422	chr6_GL000252v2_alt:4192303-4193422	0	-	4192303	4192303	8553170	3	98,129,279,	0,500,840,
#Deleted in new
chr6_GL000252v2_alt	4192803	4195994	chr6_GL000252v2_alt:4192803-4195994	0	-	4192803	4195994	789624	4	129,279,285,178,	0,340,1248,3013,
#Deleted in new
chr6_GL000252v2_alt	4193189	4194336	chr6_GL000252v2_alt:4193189-4194336	0	-	4193189	4194325	789624	2	233,285,	0,862,
#Deleted in new
chr6_GL000252v2_alt	4193616	4196567	chr6_GL000252v2_alt:4193616-4196567	0	-	4193616	4193616	8553170	3	720,178,86,	0,2200,2865,
#Deleted in new
chr6_GL000252v2_alt	4221379	4225039	chr6_GL000252v2_alt:4221379-4225039	0	+	4221379	4224251	789624	5	157,263,305,123,925,	0,277,1981,2495,2735,
#Deleted in new
chr6_GL000252v2_alt	4221379	4225039	chr6_GL000252v2_alt:4221379-4225039	3	+	4221379	4224251	789624	6	157,263,105,305,123,925,	0,277,1241,1981,2495,2735,
#Deleted in new
chr6_GL000252v2_alt	4221379	4225039	chr6_GL000252v2_alt:4221379-4225039	0	+	4221379	4224251	789624	5	157,263,305,123,925,	0,277,1981,2495,2735,
#Deleted in new
chr6_GL000252v2_alt	4221379	4225039	chr6_GL000252v2_alt:4221379-4225039	0	+	4221379	4224251	789624	5	157,263,305,123,925,	0,277,1981,2495,2735,
#Deleted in new
chr6_GL000252v2_alt	4221379	4221745	chr6_GL000252v2_alt:4221379-4221745	0	+	4221379	4221379	8553170	2	157,89,	0,277,
#Deleted in new
chr6_GL000252v2_alt	4221379	4221435	chr6_GL000252v2_alt:4221379-4221435	0	+	4221379	4221379	8553170	1	56,	0,
#Deleted in new
chr6_GL000252v2_alt	4221379	4222332	chr6_GL000252v2_alt:4221379-4222332	0	+	4221379	4221379	8553170	2	157,676,	0,277,
#Deleted in new
chr6_GL000252v2_alt	4221379	4221728	chr6_GL000252v2_alt:4221379-4221728	0	+	4221379	4221379	8553170	2	157,72,	0,277,
#Deleted in new
chr6_GL000252v2_alt	4221379	4225039	chr6_GL000252v2_alt:4221379-4225039	0	+	4221379	4224251	789624	5	157,263,305,123,925,	0,277,1981,2495,2735,
#Deleted in new
chr6_GL000252v2_alt	4223072	4224820	chr6_GL000252v2_alt:4223072-4224820	0	+	4223072	4223072	8553170	2	925,706,	0,1042,
#Deleted in new
chr6_GL000252v2_alt	4223214	4224299	chr6_GL000252v2_alt:4223214-4224299	0	+	4223214	4223214	8553170	3	451,123,185,	0,660,900,
#Deleted in new
chr6_GL000252v2_alt	4247718	4253152	chr6_GL000252v2_alt:4247718-4253152	3	-	4250377	4253076	0	5	2663,136,282,249,158,	0,2901,3132,3834,5276,
#Deleted in new
chr6_GL000252v2_alt	4250146	4250924	chr6_GL000252v2_alt:4250146-4250924	0	-	4250146	4250146	8553170	3	235,136,31,	0,473,747,
#Deleted in new
chr6_GL000252v2_alt	4250340	4251594	chr6_GL000252v2_alt:4250340-4251594	0	-	4250340	4250340	8553170	3	41,513,42,	0,279,1212,
#Deleted in new
chr6_GL000252v2_alt	4250984	4251664	chr6_GL000252v2_alt:4250984-4251664	0	-	4250984	4250984	8553170	2	433,112,	0,568,
#Deleted in new
chr6_GL000252v2_alt	4251036	4253119	chr6_GL000252v2_alt:4251036-4253119	0	-	4251036	4253076	789624	3	96,82,125,	0,516,1958,
#Deleted in new
chr6_GL000252v2_alt	4251600	4253122	chr6_GL000252v2_alt:4251600-4253122	0	-	4251600	4251600	8553170	2	344,128,	0,1394,
#Deleted in new
chr6_GL000252v2_alt	4308099	4324241	chr6_GL000252v2_alt:4308099-4324241	1	-	4312180	4317101	0	6	779,167,282,246,199,31,	0,4069,4450,5072,8902,16111,
#Deleted in new
chr6_GL000252v2_alt	4308537	4317146	chr6_GL000252v2_alt:4308537-4317146	0	-	4308537	4308537	8553170	2	4880,145,	0,8464,
#Deleted in new
chr6_GL000252v2_alt	4311190	4312779	chr6_GL000252v2_alt:4311190-4312779	0	-	4312180	4312779	789624	2	1145,230,	0,1359,
#Deleted in new
chr6_GL000252v2_alt	4312228	4317168	chr6_GL000252v2_alt:4312228-4317168	0	-	4312228	4317101	789624	4	107,271,158,167,	0,321,1031,4773,
#Deleted in new
chr6_GL000252v2_alt	4312549	4324298	chr6_GL000252v2_alt:4312549-4324298	2	-	4312549	4317101	789624	4	282,246,302,88,	0,622,4452,11661,
#Deleted in new
chr6_GL000252v2_alt	4312634	4324286	chr6_GL000252v2_alt:4312634-4324286	0	-	4312634	4312634	8553170	3	197,246,76,	0,537,11576,
#Deleted in new
chr6_GL000252v2_alt	4312692	4317164	chr6_GL000252v2_alt:4312692-4317164	0	-	4312692	4312692	8553170	3	139,246,195,	0,479,4277,
#Deleted in new
chr6_GL000252v2_alt	4317032	4324306	chr6_GL000252v2_alt:4317032-4324306	0	-	4317032	4317101	789624	2	209,96,	0,7178,
#Deleted in new
chr6_GL000252v2_alt	4319456	4330724	chr6_GL000252v2_alt:4319456-4330724	1	+	4319572	4329761	0	6	216,264,282,111,24,663,	0,4746,9016,9845,10285,10605,
#Deleted in new
chr6_GL000252v2_alt	4319502	4330724	chr6_GL000252v2_alt:4319502-4330724	1	+	4319572	4329761	789624	6	170,264,192,111,24,663,	0,4700,9060,9799,10239,10559,
#Deleted in new
chr6_GL000252v2_alt	4319540	4324763	chr6_GL000252v2_alt:4319540-4324763	0	+	4319540	4319540	8553170	2	132,561,	0,4662,
#Deleted in new
chr6_GL000252v2_alt	4322981	4323391	chr6_GL000252v2_alt:4322981-4323391	7	+	4322981	4322981	16724991	1	410,	0,
#Deleted in new
chr6_GL000252v2_alt	4323916	4327543	chr6_GL000252v2_alt:4323916-4327543	2	+	4323916	4323916	8553170	3	149,264,499,	0,286,3128,
#Deleted in new
chr6_GL000252v2_alt	4323916	4328480	chr6_GL000252v2_alt:4323916-4328480	0	+	4323916	4323916	8553170	3	149,264,8,	0,286,4556,
#Deleted in new
chr6_GL000252v2_alt	4323973	4328754	chr6_GL000252v2_alt:4323973-4328754	0	+	4323973	4323973	8553170	2	493,282,	0,4499,
#Deleted in new
chr6_GL000252v2_alt	4324017	4329412	chr6_GL000252v2_alt:4324017-4329412	0	+	4324017	4329412	789624	4	48,247,282,111,	0,202,4455,5284,
#Deleted in new
chr6_GL000252v2_alt	4324202	4330724	chr6_GL000252v2_alt:4324202-4330724	0	+	4324202	4330070	789624	5	264,282,128,24,663,	0,4270,5099,5539,5859,
#Deleted in new
chr6_GL000252v2_alt	4324471	4327421	chr6_GL000252v2_alt:4324471-4327421	0	+	4324471	4324471	8553170	3	291,132,377,	0,1066,2573,
#Deleted in new
chr6_GL000252v2_alt	4335275	4340818	chr6_GL000252v2_alt:4335275-4340818	7	-	4335275	4335275	16724991	4	151,282,245,55,	0,366,1140,5488,
#Deleted in new
chr6_GL000252v2_alt	4347290	4347494	chr6_GL000252v2_alt:4347290-4347494	7	-	4347290	4347290	16724991	2	39,60,	0,144,
#Deleted in new
chr6_GL000252v2_alt	4371315	4372582	chr6_GL000252v2_alt:4371315-4372582	7	+	4371315	4371315	16724991	3	281,111,20,	0,816,1247,
#Deleted in new
chr6_GL000252v2_alt	4374713	4386823	chr6_GL000252v2_alt:4374713-4386823	7	-	4374713	4374713	16724991	2	127,102,	0,12008,
#Deleted in new
chr6_GL000252v2_alt	4388284	4391269	chr6_GL000252v2_alt:4388284-4391269	3	+	4388284	4388284	8553170	2	164,553,	0,2432,
#Deleted in new
chr6_GL000252v2_alt	4406179	4435998	chr6_GL000252v2_alt:4406179-4435998	3	-	4407176	4435739	789624	64	1138,207,113,268,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,87,75,63,42,60,63,192,163,211,150,341,	0,1586,2171,2868,3250,3490,3832,4039,4389,4583,4745,5118,5838,6025,6274,6702,7150,7366,7645,7876,8129,8433,8590,8786,9032,9369,9608,9849,10379,10667,10821,11020,11192,11330,11484,11846,12893,13335,13578,13752,14040,14311,14500,14731,14981,15451,15627,15754,15998,16239,16392,16550,16750,17038,17577,17987,18283,18430,22311,23946,25681,26297,26639,29478,
#Deleted in new
chr6_GL000252v2_alt	4406190	4435967	chr6_GL000252v2_alt:4406190-4435967	1	-	4407176	4435739	789624	63	1127,207,113,268,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,87,75,63,42,60,192,163,211,150,310,	0,1575,2160,2857,3239,3479,3821,4028,4378,4572,4734,5107,5827,6014,6263,6691,7139,7355,7634,7865,8118,8422,8579,8775,9021,9358,9597,9838,10368,10656,10810,11009,11181,11319,11473,11835,12882,13324,13567,13741,14029,14300,14489,14720,14970,15440,15616,15743,15987,16228,16381,16539,16739,17027,17566,17976,18272,18419,23935,25670,26286,26628,29467,
#Deleted in new
chr6_GL000252v2_alt	4406190	4435967	chr6_GL000252v2_alt:4406190-4435967	1	-	4407176	4435739	789624	66	1127,207,113,268,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,87,75,63,42,60,180,63,78,192,163,211,150,310,	0,1575,2160,2857,3239,3479,3821,4028,4378,4572,4734,5107,5827,6014,6263,6691,7139,7355,7634,7865,8118,8422,8579,8775,9021,9358,9597,9838,10368,10656,10810,11009,11181,11319,11473,11835,12882,13324,13567,13741,14029,14300,14489,14720,14970,15440,15616,15743,15987,16228,16381,16539,16739,17027,17566,17976,18272,18419,21453,22300,23009,23935,25670,26286,26628,29467,
#Deleted in new
chr6_GL000252v2_alt	4406193	4421392	chr6_GL000252v2_alt:4406193-4421392	0	-	4406193	4406193	8553170	9	1124,207,113,268,37,45,54,45,91,	0,1572,2157,2854,14314,14486,14717,14967,15108,
#Deleted in new
chr6_GL000252v2_alt	4421630	4435966	chr6_GL000252v2_alt:4421630-4435966	0	-	4421630	4435739	789624	21	54,45,54,54,54,54,54,57,87,75,63,42,60,180,63,78,192,163,211,150,309,	0,176,303,547,788,941,1099,1299,1587,2126,2536,2832,2979,6013,6860,7569,8495,10230,10846,11188,14027,
#Deleted in new
chr6_GL000252v2_alt	4429943	4435953	chr6_GL000252v2_alt:4429943-4435953	1	-	4430050	4435739	789624	5	374,163,211,150,296,	0,1917,2533,2875,5714,
#Deleted in new
chr6_GL000252v2_alt	4437086	4444187	chr6_GL000252v2_alt:4437086-4444187	3	-	4438180	4443975	0	10	1242,106,92,133,130,173,180,157,248,447,	0,1357,1775,1982,2319,2846,4174,4720,5581,6654,
#Deleted in new
chr6_GL000252v2_alt	4437086	4444113	chr6_GL000252v2_alt:4437086-4444113	1	-	4438180	4443975	0	10	1242,106,104,133,130,173,180,157,248,373,	0,1357,1775,1982,2319,2846,4174,4720,5581,6654,
#Deleted in new
chr6_GL000252v2_alt	4437718	4444136	chr6_GL000252v2_alt:4437718-4444136	0	-	4441958	4443975	789624	9	610,106,92,133,130,173,180,157,396,	0,725,1143,1350,1687,2214,3542,4088,6022,
#Deleted in new
chr6_GL000252v2_alt	4438162	4438859	chr6_GL000252v2_alt:4438162-4438859	0	-	4438162	4438162	8553170	2	166,416,	0,281,
#Deleted in new
chr6_GL000252v2_alt	4438547	4439937	chr6_GL000252v2_alt:4438547-4439937	0	-	4438861	4439937	789624	5	2,92,58,130,5,	0,314,521,858,1385,
#Deleted in new
chr6_GL000252v2_alt	4439283	4442134	chr6_GL000252v2_alt:4439283-4442134	0	-	4439283	4439283	8553170	3	822,180,328,	0,1977,2523,
#Deleted in new
chr6_GL000252v2_alt	4443099	4443195	chr6_GL000252v2_alt:4443099-4443195	3	+	4443099	4443099	8553170	1	96,	0,
#Deleted in new
chr6_GL000252v2_alt	4443943	4446191	chr6_GL000252v2_alt:4443943-4446191	0	+	4444296	4446191	789624	5	494,169,54,165,133,	0,1300,1627,1818,2115,
#Deleted in new
chr6_GL000252v2_alt	4444324	4447938	chr6_GL000252v2_alt:4444324-4447938	3	+	4444744	4447312	789624	8	113,415,169,54,165,141,197,899,	0,416,919,1246,1437,1734,2084,2715,
#Deleted in new
chr6_GL000252v2_alt	4444371	4447938	chr6_GL000252v2_alt:4444371-4447938	1	+	4444744	4447312	789624	7	784,169,54,165,141,197,899,	0,872,1199,1390,1687,2037,2668,
#Deleted in new
chr6_GL000252v2_alt	4444423	4447938	chr6_GL000252v2_alt:4444423-4447938	0	+	4444423	4444423	8553170	4	732,169,51,544,	0,820,1147,2971,
#Deleted in new
chr6_GL000252v2_alt	4444744	4447938	chr6_GL000252v2_alt:4444744-4447938	0	+	4444744	4444744	8553170	5	411,169,54,32,439,	0,499,826,1017,2755,
#Deleted in new
chr6_GL000252v2_alt	4445753	4447938	chr6_GL000252v2_alt:4445753-4447938	0	+	4445753	4445753	8553170	4	173,141,197,899,	0,305,655,1286,
#Deleted in new
chr6_GL000252v2_alt	4448140	4450330	chr6_GL000252v2_alt:4448140-4450330	3	+	4448167	4450153	0	9	79,218,117,93,86,85,43,75,194,	0,260,579,805,998,1186,1492,1733,1996,
#Deleted in new
chr6_GL000252v2_alt	4448184	4449948	chr6_GL000252v2_alt:4448184-4449948	0	+	4448184	4448184	8553170	7	434,117,93,86,85,43,75,	0,535,761,954,1142,1448,1689,
#Deleted in new
chr6_GL000252v2_alt	4451993	4456221	chr6_GL000252v2_alt:4451993-4456221	3	+	4452321	4455898	789624	7	150,136,161,216,390,274,425,	0,270,1131,1420,2663,3234,3803,
#Deleted in new
chr6_GL000252v2_alt	4453058	4456221	chr6_GL000252v2_alt:4453058-4456221	0	+	4453058	4453058	8553170	5	227,216,390,274,425,	0,355,1598,2169,2738,
#Deleted in new
chr6_GL000252v2_alt	4459203	4459827	chr6_GL000252v2_alt:4459203-4459827	7	+	4459203	4459203	16724991	1	624,	0,
#Deleted in new
chr6_GL000252v2_alt	4481302	4483194	chr6_GL000252v2_alt:4481302-4483194	7	+	4481302	4481302	16724991	3	553,145,286,	0,837,1606,
#Deleted in new
chr6_GL000252v2_alt	4493045	4498456	chr6_GL000252v2_alt:4493045-4498456	3	+	4493045	4493045	789624	5	122,100,96,194,247,	0,256,1082,1979,5164,
#Deleted in new
chr6_GL000252v2_alt	4493095	4495451	chr6_GL000252v2_alt:4493095-4495451	0	+	4493095	4493095	8553170	4	72,100,103,427,	0,206,1025,1929,
#Deleted in new
chr6_GL000252v2_alt	4493107	4498501	chr6_GL000252v2_alt:4493107-4498501	0	+	4493107	4493107	8553170	5	60,100,96,129,292,	0,194,1020,1982,5102,
#Deleted in new
chr6_GL000252v2_alt	4493783	4515408	chr6_GL000252v2_alt:4493783-4515408	3	-	4494352	4515189	789624	20	716,119,112,66,108,96,124,119,156,134,58,133,101,151,176,68,76,53,85,309,	0,1246,1588,13214,13502,13738,14104,14512,16287,16918,17412,17595,17838,18229,18744,19220,19474,19729,19929,21316,
#Deleted in new
chr6_GL000252v2_alt	4493783	4515561	chr6_GL000252v2_alt:4493783-4515561	0	-	4493783	4493783	8553170	18	716,119,112,66,108,96,124,119,156,133,101,151,176,68,76,53,85,143,	0,1246,1588,13214,13502,13738,14104,14512,16287,17595,17838,18229,18744,19220,19474,19729,19929,21635,
#Deleted in new
chr6_GL000252v2_alt	4493783	4515390	chr6_GL000252v2_alt:4493783-4515390	0	-	4493783	4493783	8553170	19	716,119,112,66,108,96,124,119,156,134,58,133,101,151,176,68,76,85,740,	0,1246,1588,13214,13502,13738,14104,14512,16287,16918,17412,17595,17838,18229,18744,19220,19474,19929,20867,
#Deleted in new
chr6_GL000252v2_alt	4493790	4495147	chr6_GL000252v2_alt:4493790-4495147	0	+	4493790	4493790	8553170	2	433,36,	0,1321,
#Deleted in new
chr6_GL000252v2_alt	4494117	4507127	chr6_GL000252v2_alt:4494117-4507127	0	-	4494117	4494117	8553170	4	382,119,112,130,	0,912,1254,12880,
#Deleted in new
chr6_GL000252v2_alt	4494322	4507817	chr6_GL000252v2_alt:4494322-4507817	0	-	4494322	4494322	8553170	6	177,119,112,66,108,296,	0,707,1049,12675,12963,13199,
#Deleted in new
chr6_GL000252v2_alt	4495428	4508078	chr6_GL000252v2_alt:4495428-4508078	0	-	4495428	4495428	8553170	5	55,66,97,96,191,	0,11569,11868,12093,12459,
#Deleted in new
chr6_GL000252v2_alt	4507061	4507736	chr6_GL000252v2_alt:4507061-4507736	0	-	4507061	4507061	8553170	2	332,215,	0,460,
#Deleted in new
chr6_GL000252v2_alt	4507592	4510779	chr6_GL000252v2_alt:4507592-4510779	0	-	4507592	4507592	8553170	4	25,527,156,78,	0,295,2478,3109,
#Deleted in new
chr6_GL000252v2_alt	4510979	4511667	chr6_GL000252v2_alt:4510979-4511667	0	-	4510979	4510979	8553170	3	274,133,46,	0,399,642,
#Deleted in new
chr6_GL000252v2_alt	4511383	4515291	chr6_GL000252v2_alt:4511383-4515291	0	-	4511383	4511383	8553170	9	128,101,151,176,68,76,53,85,87,	0,238,629,1144,1620,1874,2129,2329,3821,
#Deleted in new
chr6_GL000252v2_alt	4511384	4515398	chr6_GL000252v2_alt:4511384-4515398	0	-	4511384	4511384	8553170	9	127,101,151,205,68,76,53,85,194,	0,237,628,1143,1619,1873,2128,2328,3820,
#Deleted in new
chr6_GL000252v2_alt	4515523	4520024	chr6_GL000252v2_alt:4515523-4520024	3	+	4515633	4519980	0	6	113,99,87,102,92,120,	0,618,3787,3955,4166,4381,
#Deleted in new
chr6_GL000252v2_alt	4515588	4520024	chr6_GL000252v2_alt:4515588-4520024	0	+	4515588	4515588	8553170	6	48,140,87,102,92,120,	0,512,3722,3890,4101,4316,
#Deleted in new
chr6_GL000252v2_alt	4515601	4520019	chr6_GL000252v2_alt:4515601-4520019	0	+	4515601	4515601	8553170	5	35,99,87,303,115,	0,540,3709,3877,4303,
#Deleted in new
chr6_GL000252v2_alt	4515609	4520024	chr6_GL000252v2_alt:4515609-4520024	1	+	4519499	4519980	789624	7	27,99,158,87,102,92,120,	0,532,3404,3701,3869,4080,4295,
#Deleted in new
chr6_GL000252v2_alt	4515612	4520019	chr6_GL000252v2_alt:4515612-4520019	0	+	4515612	4515612	8553170	5	24,99,87,102,330,	0,529,3698,3866,4077,
#Deleted in new
chr6_GL000252v2_alt	4515645	4520024	chr6_GL000252v2_alt:4515645-4520024	0	+	4515645	4515645	8553170	5	595,87,102,92,120,	0,3665,3833,4044,4259,
#Deleted in new
chr6_GL000252v2_alt	4518834	4520024	chr6_GL000252v2_alt:4518834-4520024	0	+	4518834	4518834	8553170	2	563,546,	0,644,
#Deleted in new
chr6_GL000252v2_alt	4519379	4520024	chr6_GL000252v2_alt:4519379-4520024	0	+	4519379	4519379	8553170	3	201,92,120,	0,310,525,
#Deleted in new
chr6_GL000252v2_alt	4520645	4522339	chr6_GL000252v2_alt:4520645-4522339	3	+	4520933	4522070	789624	1	1694,	0,
#Deleted in new
chr6_GL000252v2_alt	4522621	4533045	chr6_GL000252v2_alt:4522621-4533045	3	-	4522789	4532688	789624	15	267,114,96,95,314,100,136,151,105,62,88,113,81,210,426,	0,389,656,1320,1566,7691,7987,8251,8510,8861,9044,9254,9510,9700,9998,
#Deleted in new
chr6_GL000252v2_alt	4522621	4524365	chr6_GL000252v2_alt:4522621-4524365	0	-	4522621	4522621	8553170	4	503,96,95,178,	0,656,1320,1566,
#Deleted in new
chr6_GL000252v2_alt	4522621	4524425	chr6_GL000252v2_alt:4522621-4524425	0	-	4522621	4522621	8553170	5	267,114,96,95,97,	0,389,656,1320,1707,
#Deleted in new
chr6_GL000252v2_alt	4522621	4524036	chr6_GL000252v2_alt:4522621-4524036	0	-	4522621	4522621	8553170	3	240,96,95,	0,656,1320,
#Deleted in new
chr6_GL000252v2_alt	4523084	4530947	chr6_GL000252v2_alt:4523084-4530947	0	-	4523084	4523084	8553170	6	40,96,560,100,136,75,	0,193,857,7228,7524,7788,
#Deleted in new
chr6_GL000252v2_alt	4524429	4532405	chr6_GL000252v2_alt:4524429-4532405	0	-	4524429	4532405	789624	10	72,100,136,151,105,38,88,113,81,84,	0,5883,6179,6443,6702,7053,7236,7446,7702,7892,
#Deleted in new
chr6_GL000252v2_alt	4530760	4531544	chr6_GL000252v2_alt:4530760-4531544	0	-	4530760	4530760	8553170	2	476,62,	0,722,
#Deleted in new
chr6_GL000252v2_alt	4531009	4532765	chr6_GL000252v2_alt:4531009-4532765	0	-	4531009	4531009	8553170	7	14,105,62,323,81,210,146,	0,122,473,656,1122,1312,1610,
#Deleted in new
chr6_GL000252v2_alt	4531181	4532720	chr6_GL000252v2_alt:4531181-4532720	0	-	4531181	4531181	8553170	7	55,62,88,113,131,210,101,	0,301,484,694,900,1140,1438,
#Deleted in new
chr6_GL000252v2_alt	4531573	4532530	chr6_GL000252v2_alt:4531573-4532530	0	-	4531573	4531573	8553170	4	180,113,81,209,	0,302,558,748,
#Deleted in new
chr6_GL000252v2_alt	4532819	4534451	chr6_GL000252v2_alt:4532819-4534451	1	+	4533374	4534363	789624	5	319,151,71,125,218,	0,468,872,1024,1414,
#Deleted in new
chr6_GL000252v2_alt	4533112	4534451	chr6_GL000252v2_alt:4533112-4534451	1	+	4533374	4534363	789624	4	326,71,125,218,	0,579,731,1121,
#Deleted in new
chr6_GL000252v2_alt	4533113	4534393	chr6_GL000252v2_alt:4533113-4534393	0	+	4533113	4533113	8553170	4	33,151,71,550,	0,174,578,730,
#Deleted in new
chr6_GL000252v2_alt	4533114	4534380	chr6_GL000252v2_alt:4533114-4534380	1	+	4533374	4534363	789624	5	32,146,71,125,147,	0,178,577,729,1119,
#Deleted in new
chr6_GL000252v2_alt	4533114	4534452	chr6_GL000252v2_alt:4533114-4534452	1	+	4533374	4534363	789624	5	32,151,71,125,219,	0,173,577,729,1119,
#Deleted in new
chr6_GL000252v2_alt	4533144	4534386	chr6_GL000252v2_alt:4533144-4534386	0	+	4533144	4533144	8553170	2	294,695,	0,547,
#Deleted in new
chr6_GL000252v2_alt	4533292	4541919	chr6_GL000252v2_alt:4533292-4541919	3	+	4533374	4540398	789624	4	146,71,125,1573,	0,399,551,7054,
#Deleted in new
chr6_GL000252v2_alt	4535171	4542842	chr6_GL000252v2_alt:4535171-4542842	3	-	4535619	4542128	789624	18	660,115,291,112,96,122,33,75,69,85,104,252,298,51,179,84,197,455,	0,776,1362,1759,1950,2141,2380,3034,3323,3473,3665,3854,4374,4760,4944,5378,6801,7216,
#Deleted in new
chr6_GL000252v2_alt	4535171	4542493	chr6_GL000252v2_alt:4535171-4542493	0	-	4535171	4535171	8553170	17	660,115,291,112,96,122,33,75,69,85,104,816,50,179,84,197,106,	0,776,1362,1759,1950,2141,2380,3034,3323,3473,3665,3854,4761,4944,5378,6801,7216,
#Deleted in new
chr6_GL000252v2_alt	4535171	4540621	chr6_GL000252v2_alt:4535171-4540621	0	-	4535171	4535171	8553170	15	660,115,291,112,96,122,33,75,69,85,104,252,51,179,72,	0,776,1362,1759,1950,2141,2380,3034,3323,3473,3665,3854,4760,4944,5378,
#Deleted in new
chr6_GL000252v2_alt	4535171	4542448	chr6_GL000252v2_alt:4535171-4542448	0	-	4535171	4535171	8553170	17	660,115,291,112,96,122,33,75,69,85,104,252,298,51,179,84,61,	0,776,1362,1759,1950,2141,2380,3034,3323,3473,3665,3854,4374,4760,4944,5378,7216,
#Deleted in new
chr6_GL000252v2_alt	4535171	4542039	chr6_GL000252v2_alt:4535171-4542039	0	-	4535171	4535171	8553170	16	660,115,291,287,122,33,75,69,85,104,252,298,51,179,84,67,	0,776,1362,1759,2141,2380,3034,3323,3473,3665,3854,4374,4760,4944,5378,6801,
#Deleted in new
chr6_GL000252v2_alt	4535623	4537448	chr6_GL000252v2_alt:4535623-4537448	0	-	4535623	4535623	8553170	5	208,115,291,287,136,	0,324,910,1307,1689,
#Deleted in new
chr6_GL000252v2_alt	4536612	4539141	chr6_GL000252v2_alt:4536612-4539141	0	-	4536612	4536612	8553170	9	212,112,96,272,75,69,85,104,116,	0,318,509,700,1593,1882,2032,2224,2413,
#Deleted in new
chr6_GL000252v2_alt	4539204	4541504	chr6_GL000252v2_alt:4539204-4541504	0	-	4539204	4539204	8553170	5	639,51,179,84,56,	0,727,911,1345,2244,
#Deleted in new
chr6_GL000252v2_alt	4539323	4541511	chr6_GL000252v2_alt:4539323-4541511	0	-	4539323	4539323	8553170	6	520,51,179,84,130,63,	0,608,792,1226,1408,2125,
#Deleted in new
chr6_GL000252v2_alt	4539616	4541210	chr6_GL000252v2_alt:4539616-4541210	0	-	4539616	4539616	8553170	5	227,51,179,84,479,	0,315,499,933,1115,
#Deleted in new
chr6_GL000252v2_alt	4539674	4540904	chr6_GL000252v2_alt:4539674-4540904	0	-	4539674	4539674	8553170	4	169,51,179,355,	0,257,441,875,
#Deleted in new
chr6_GL000252v2_alt	4539961	4542328	chr6_GL000252v2_alt:4539961-4542328	0	-	4539961	4542128	789624	4	21,179,84,356,	0,154,588,2011,
#Deleted in new
chr6_GL000252v2_alt	4543211	4557902	chr6_GL000252v2_alt:4543211-4557902	1	-	4545284	4557556	0	8	2085,35,90,342,399,261,171,383,	0,4270,4443,4612,5304,13520,13997,14308,
#Deleted in new
chr6_GL000252v2_alt	4543211	4557766	chr6_GL000252v2_alt:4543211-4557766	3	-	4545284	4557556	789624	9	2085,35,90,342,399,54,261,171,247,	0,4270,4443,4612,5304,8416,13520,13997,14308,
#Deleted in new
chr6_GL000252v2_alt	4543211	4557759	chr6_GL000252v2_alt:4543211-4557759	0	-	4543211	4543211	8553170	7	2085,35,90,85,181,171,240,	0,4270,4443,4612,13600,13997,14308,
#Deleted in new
chr6_GL000252v2_alt	4543248	4557571	chr6_GL000252v2_alt:4543248-4557571	0	-	4543248	4543248	8553170	6	364,90,399,261,171,52,	0,4827,5267,13483,13960,14271,
#Deleted in new
chr6_GL000252v2_alt	4547163	4557727	chr6_GL000252v2_alt:4547163-4557727	1	-	4547301	4557556	0	7	353,90,342,399,261,171,208,	0,491,660,1352,9568,10045,10356,
#Deleted in new
chr6_GL000252v2_alt	4547189	4557564	chr6_GL000252v2_alt:4547189-4557564	0	-	4547189	4547189	8553170	4	1725,261,171,45,	0,9542,10019,10330,
#Deleted in new
chr6_GL000252v2_alt	4547301	4557685	chr6_GL000252v2_alt:4547301-4557685	1	-	4547301	4557556	789624	8	12,35,90,342,399,261,171,166,	0,180,353,522,1214,9430,9907,10218,
#Deleted in new
chr6_GL000252v2_alt	4547794	4557556	chr6_GL000252v2_alt:4547794-4557556	0	-	4547794	4547794	8553170	5	371,399,261,171,37,	0,721,8937,9414,9725,
#Deleted in new
chr6_GL000252v2_alt	4548515	4557561	chr6_GL000252v2_alt:4548515-4557561	0	-	4548515	4557556	789624	3	399,171,42,	0,8693,9004,
#Deleted in new
chr6_GL000252v2_alt	4556529	4557470	chr6_GL000252v2_alt:4556529-4557470	0	-	4556529	4556529	8553170	2	463,262,	0,679,
#Deleted in new
chr6_GL000252v2_alt	4557932	4561251	chr6_GL000252v2_alt:4557932-4561251	3	-	4558526	4560431	789624	2	2568,83,	0,3236,
#Deleted in new
chr6_GL000252v2_alt	4559983	4561457	chr6_GL000252v2_alt:4559983-4561457	0	-	4559983	4560431	789624	2	517,64,	0,1410,
#Deleted in new
chr6_GL000252v2_alt	4562072	4566533	chr6_GL000252v2_alt:4562072-4566533	1	-	4562259	4565442	0	8	247,223,475,214,212,832,259,153,	0,441,824,1455,1824,2180,3163,4308,
#Deleted in new
chr6_GL000252v2_alt	4562072	4566529	chr6_GL000252v2_alt:4562072-4566529	1	-	4562259	4565442	0	8	247,223,475,214,212,832,256,149,	0,441,824,1455,1824,2180,3163,4308,
#Deleted in new
chr6_GL000252v2_alt	4562073	4566535	chr6_GL000252v2_alt:4562073-4566535	1	-	4562259	4565066	0	7	246,223,475,214,212,832,155,	0,440,823,1454,1823,2179,4307,
#Deleted in new
chr6_GL000252v2_alt	4562073	4566535	chr6_GL000252v2_alt:4562073-4566535	1	-	4562263	4565442	0	9	246,53,18,475,214,212,832,259,155,	0,440,645,823,1454,1823,2179,3162,4307,
#Deleted in new
chr6_GL000252v2_alt	4563049	4566449	chr6_GL000252v2_alt:4563049-4566449	0	-	4563049	4563049	8553170	4	322,214,212,69,	0,478,847,3331,
#Deleted in new
chr6_GL000252v2_alt	4563101	4565386	chr6_GL000252v2_alt:4563101-4565386	0	-	4563101	4563101	8553170	4	270,214,212,151,	0,426,795,2134,
#Deleted in new
chr6_GL000252v2_alt	4563180	4563977	chr6_GL000252v2_alt:4563180-4563977	0	-	4563180	4563180	8553170	2	191,450,	0,347,
#Deleted in new
chr6_GL000252v2_alt	4564385	4566437	chr6_GL000252v2_alt:4564385-4566437	0	-	4564385	4564385	8553170	2	699,57,	0,1995,
#Deleted in new
chr6_GL000252v2_alt	4564756	4566464	chr6_GL000252v2_alt:4564756-4566464	2	-	4564756	4565442	789624	3	328,290,84,	0,479,1624,
#Deleted in new
chr6_GL000252v2_alt	4564902	4572750	chr6_GL000252v2_alt:4564902-4572750	0	-	4564902	4565442	789624	4	182,259,60,250,	0,333,2587,7598,
#Deleted in new
chr6_GL000252v2_alt	4565127	4566476	chr6_GL000252v2_alt:4565127-4566476	0	-	4565127	4565127	8553170	2	367,96,	0,1253,
#Deleted in new
chr6_GL000252v2_alt	4565298	4566322	chr6_GL000252v2_alt:4565298-4566322	0	-	4565298	4565442	789624	2	196,175,	0,849,
#Deleted in new
chr6_GL000252v2_alt	4567146	4572783	chr6_GL000252v2_alt:4567146-4572783	0	-	4567146	4567146	8553170	3	237,60,283,	0,343,5354,
#Deleted in new
chr6_GL000252v2_alt	4582493	4583011	chr6_GL000252v2_alt:4582493-4583011	7	+	4582493	4582493	16724991	1	518,	0,
#Deleted in new
chr6_GL000253v2_alt	49215	49587	chr6_GL000253v2_alt:49215-49587	7	-	49215	49215	16724991	1	372,	0,
#Deleted in new
chr6_GL000253v2_alt	103430	104568	chr6_GL000253v2_alt:103430-104568	3	-	103430	103430	8553170	2	452,257,	0,881,
#Deleted in new
chr6_GL000253v2_alt	125182	128908	chr6_GL000253v2_alt:125182-128908	3	-	125182	125182	8553170	2	2391,67,	0,3659,
#Deleted in new
chr6_GL000253v2_alt	126973	127605	chr6_GL000253v2_alt:126973-127605	7	+	126973	126973	16724991	1	632,	0,
#Deleted in new
chr6_GL000253v2_alt	180334	185742	chr6_GL000253v2_alt:180334-185742	0	-	180334	180334	8553170	2	515,172,	0,5236,
#Deleted in new
chr6_GL000253v2_alt	181203	181303	chr6_GL000253v2_alt:181203-181303	3	+	181203	181203	8553170	1	100,	0,
#Deleted in new
chr6_GL000253v2_alt	185570	189547	chr6_GL000253v2_alt:185570-189547	0	-	185570	189191	789624	3	231,96,776,	0,1880,3201,
#Deleted in new
chr6_GL000253v2_alt	185570	189548	chr6_GL000253v2_alt:185570-189548	3	-	185570	189191	789624	3	231,96,777,	0,1880,3201,
#Deleted in new
chr6_GL000253v2_alt	185570	189472	chr6_GL000253v2_alt:185570-189472	0	-	185570	185570	8553170	3	231,96,701,	0,1880,3201,
#Deleted in new
chr6_GL000253v2_alt	185570	187535	chr6_GL000253v2_alt:185570-187535	0	-	185570	185570	8553170	2	231,85,	0,1880,
#Deleted in new
chr6_GL000253v2_alt	209438	210099	chr6_GL000253v2_alt:209438-210099	3	+	209465	209849	789624	2	150,316,	0,345,
#Deleted in new
chr6_GL000253v2_alt	234691	236022	chr6_GL000253v2_alt:234691-236022	7	-	234691	234691	16724991	1	1331,	0,
#Deleted in new
chr6_GL000253v2_alt	243034	243333	chr6_GL000253v2_alt:243034-243333	3	+	243034	243034	8553170	1	299,	0,
#Deleted in new
chr6_GL000253v2_alt	251761	253043	chr6_GL000253v2_alt:251761-253043	3	+	251761	251761	8553170	3	30,194,808,	0,110,474,
#Deleted in new
chr6_GL000253v2_alt	252358	254095	chr6_GL000253v2_alt:252358-254095	3	+	252358	252358	8553170	2	80,237,	0,1500,
#Deleted in new
chr6_GL000253v2_alt	260342	270818	chr6_GL000253v2_alt:260342-270818	3	-	260558	269512	789624	7	1802,105,127,92,82,269,253,	0,3949,4702,5171,8728,9161,10223,
#Deleted in new
chr6_GL000253v2_alt	260342	270874	chr6_GL000253v2_alt:260342-270874	0	-	260342	260342	8553170	6	1802,105,561,82,168,309,	0,3949,4702,8728,9113,10223,
#Deleted in new
chr6_GL000253v2_alt	292237	293165	chr6_GL000253v2_alt:292237-293165	7	-	292237	292237	16724991	1	928,	0,
#Deleted in new
chr6_GL000253v2_alt	309770	310798	chr6_GL000253v2_alt:309770-310798	3	-	309770	310733	789624	1	1028,	0,
#Deleted in new
chr6_GL000253v2_alt	329553	342081	chr6_GL000253v2_alt:329553-342081	3	+	329553	342081	789624	3	133,52,229,	0,1124,12299,
#Deleted in new
chr6_GL000253v2_alt	337380	338156	chr6_GL000253v2_alt:337380-338156	7	-	337380	337380	16724991	1	776,	0,
#Deleted in new
chr6_GL000253v2_alt	342129	342725	chr6_GL000253v2_alt:342129-342725	7	-	342129	342129	16724991	1	596,	0,
#Deleted in new
chr6_GL000253v2_alt	351864	352871	chr6_GL000253v2_alt:351864-352871	3	-	351864	352806	789624	1	1007,	0,
#Deleted in new
chr6_GL000253v2_alt	366507	367446	chr6_GL000253v2_alt:366507-367446	7	+	366507	366507	16724991	1	939,	0,
#Deleted in new
chr6_GL000253v2_alt	377449	378385	chr6_GL000253v2_alt:377449-378385	3	+	377449	378385	789624	1	936,	0,
#Deleted in new
chr6_GL000253v2_alt	389768	394466	chr6_GL000253v2_alt:389768-394466	3	+	389768	389768	8553170	2	137,252,	0,4446,
#Deleted in new
chr6_GL000253v2_alt	403433	404370	chr6_GL000253v2_alt:403433-404370	7	-	403433	403433	16724991	1	937,	0,
#Deleted in new
chr6_GL000253v2_alt	438865	440137	chr6_GL000253v2_alt:438865-440137	3	+	439198	440137	789624	1	1272,	0,
#Deleted in new
chr6_GL000253v2_alt	447084	448020	chr6_GL000253v2_alt:447084-448020	7	+	447084	447084	16724991	1	936,	0,
#Deleted in new
chr6_GL000253v2_alt	480835	481779	chr6_GL000253v2_alt:480835-481779	7	+	480835	480835	16724991	1	944,	0,
#Deleted in new
chr6_GL000253v2_alt	489572	532659	chr6_GL000253v2_alt:489572-532659	3	+	489572	489572	789624	3	79,230,155,	0,39833,42932,
#Deleted in new
chr6_GL000253v2_alt	494826	495757	chr6_GL000253v2_alt:494826-495757	7	-	494826	494826	16724991	1	931,	0,
#Deleted in new
chr6_GL000253v2_alt	528276	529653	chr6_GL000253v2_alt:528276-529653	7	-	528276	528276	16724991	2	291,588,	0,789,
#Deleted in new
chr6_GL000253v2_alt	534035	534995	chr6_GL000253v2_alt:534035-534995	7	-	534035	534035	16724991	1	960,	0,
#Deleted in new
chr6_GL000253v2_alt	556302	557245	chr6_GL000253v2_alt:556302-557245	7	+	556302	556302	16724991	1	943,	0,
#Deleted in new
chr6_GL000253v2_alt	572291	573257	chr6_GL000253v2_alt:572291-573257	3	+	572291	573257	789624	1	966,	0,
#Deleted in new
chr6_GL000253v2_alt	595228	596664	chr6_GL000253v2_alt:595228-596664	7	-	595228	595228	16724991	1	1436,	0,
#Deleted in new
chr6_GL000253v2_alt	620833	697102	chr6_GL000253v2_alt:620833-697102	3	-	620833	621799	789624	4	1048,76,38,104,	0,66911,67329,76165,
#Deleted in new
chr6_GL000253v2_alt	620833	671691	chr6_GL000253v2_alt:620833-671691	1	-	620833	621799	789624	2	1048,69,	0,50789,
#Deleted in new
chr6_GL000253v2_alt	620833	621881	chr6_GL000253v2_alt:620833-621881	1	-	620833	621799	789624	1	1048,	0,
#Deleted in new
chr6_GL000253v2_alt	638712	715227	chr6_GL000253v2_alt:638712-715227	3	-	639626	640577	789624	2	1869,142,	0,76373,
#Deleted in new
chr6_GL000253v2_alt	638712	640581	chr6_GL000253v2_alt:638712-640581	1	-	639626	640577	789624	1	1869,	0,
#Deleted in new
chr6_GL000253v2_alt	661699	662768	chr6_GL000253v2_alt:661699-662768	3	+	661844	662768	789624	1	1069,	0,
#Deleted in new
chr6_GL000253v2_alt	682417	683364	chr6_GL000253v2_alt:682417-683364	7	+	682417	682417	16724991	2	582,270,	0,677,
#Deleted in new
chr6_GL000253v2_alt	690639	693602	chr6_GL000253v2_alt:690639-693602	1	-	691829	692777	789624	2	2229,253,	0,2710,
#Deleted in new
chr6_GL000253v2_alt	690639	722195	chr6_GL000253v2_alt:690639-722195	3	-	691829	692777	789624	5	2229,48,125,124,85,	0,3408,4796,6359,31471,
#Deleted in new
chr6_GL000253v2_alt	690639	692868	chr6_GL000253v2_alt:690639-692868	1	-	691829	692777	789624	1	2229,	0,
#Deleted in new
chr6_GL000253v2_alt	704440	706089	chr6_GL000253v2_alt:704440-706089	3	+	705150	706089	789624	1	1649,	0,
#Deleted in new
chr6_GL000253v2_alt	705073	706112	chr6_GL000253v2_alt:705073-706112	1	+	705144	706089	789624	1	1039,	0,
#Deleted in new
chr6_GL000253v2_alt	722304	729453	chr6_GL000253v2_alt:722304-729453	3	+	726894	727845	789624	4	27,116,51,2830,	0,1273,3224,4319,
#Deleted in new
chr6_GL000253v2_alt	722311	729453	chr6_GL000253v2_alt:722311-729453	1	+	726894	727845	789624	4	20,116,51,2834,	0,1266,3217,4308,
#Deleted in new
chr6_GL000253v2_alt	722326	726211	chr6_GL000253v2_alt:722326-726211	0	+	722326	722326	8553170	4	5,116,164,211,	0,1251,2818,3674,
#Deleted in new
chr6_GL000253v2_alt	724894	729453	chr6_GL000253v2_alt:724894-729453	1	+	726894	727845	789624	3	414,1259,580,	0,1705,3979,
#Deleted in new
chr6_GL000253v2_alt	726564	727858	chr6_GL000253v2_alt:726564-727858	1	+	726894	727845	789624	1	1294,	0,
#Deleted in new
chr6_GL000253v2_alt	726619	727845	chr6_GL000253v2_alt:726619-727845	0	+	726619	726619	8553170	2	256,717,	0,509,
#Deleted in new
chr6_GL000253v2_alt	726619	727845	chr6_GL000253v2_alt:726619-727845	0	+	726619	726619	8553170	2	256,730,	0,496,
#Deleted in new
chr6_GL000253v2_alt	729720	734931	chr6_GL000253v2_alt:729720-734931	7	-	729720	729720	16724991	2	359,22,	0,5189,
#Deleted in new
chr6_GL000253v2_alt	740149	741196	chr6_GL000253v2_alt:740149-741196	7	-	740149	740149	16724991	1	1047,	0,
#Deleted in new
chr6_GL000253v2_alt	751890	753027	chr6_GL000253v2_alt:751890-753027	3	-	751890	753027	789624	1	1137,	0,
#Deleted in new
chr6_GL000253v2_alt	754396	754802	chr6_GL000253v2_alt:754396-754802	7	-	754396	754396	16724991	1	406,	0,
#Deleted in new
chr6_GL000253v2_alt	762634	775681	chr6_GL000253v2_alt:762634-775681	3	+	762634	762634	8553170	4	31,57,500,289,	0,7811,9659,12758,
#Deleted in new
chr6_GL000253v2_alt	794550	798699	chr6_GL000253v2_alt:794550-798699	3	+	794550	794550	789624	3	165,95,2517,	0,529,1632,
#Deleted in new
chr6_GL000253v2_alt	794606	797288	chr6_GL000253v2_alt:794606-797288	0	+	794606	794606	8553170	4	109,95,117,78,	0,473,1576,2604,
#Deleted in new
chr6_GL000253v2_alt	802834	803918	chr6_GL000253v2_alt:802834-803918	7	-	802834	802834	16724991	1	1084,	0,
#Deleted in new
chr6_GL000253v2_alt	818376	819324	chr6_GL000253v2_alt:818376-819324	7	+	818376	818376	16724991	1	948,	0,
#Deleted in new
chr6_GL000253v2_alt	820770	825085	chr6_GL000253v2_alt:820770-825085	3	-	821038	824861	789624	2	739,251,	0,4064,
#Deleted in new
chr6_GL000253v2_alt	820770	893182	chr6_GL000253v2_alt:820770-893182	1	-	868723	892935	0	19	739,176,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,553,	0,47951,48904,49270,49979,50801,51308,51513,53012,53640,55330,56956,57649,65474,66125,66477,67678,68263,71859,
#Deleted in new
chr6_GL000253v2_alt	839091	840019	chr6_GL000253v2_alt:839091-840019	7	+	839091	839091	16724991	1	928,	0,
#Deleted in new
chr6_GL000253v2_alt	842642	842932	chr6_GL000253v2_alt:842642-842932	7	+	842642	842642	16724991	1	290,	0,
#Deleted in new
chr6_GL000253v2_alt	847432	847516	chr6_GL000253v2_alt:847432-847516	3	+	847432	847432	789624	1	84,	0,
#Deleted in new
chr6_GL000253v2_alt	847691	848209	chr6_GL000253v2_alt:847691-848209	7	+	847691	847691	16724991	1	518,	0,
#Deleted in new
chr6_GL000253v2_alt	852638	854222	chr6_GL000253v2_alt:852638-854222	3	+	853128	854067	789624	1	1584,	0,
#Deleted in new
chr6_GL000253v2_alt	867410	898309	chr6_GL000253v2_alt:867410-898309	1	-	868723	897534	789624	23	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,186,204,85,311,	0,2264,2630,3339,4161,4668,4873,6372,7000,8690,10316,11009,18834,19485,19837,21038,21623,25219,26820,28194,29132,30039,30588,
#Deleted in new
chr6_GL000253v2_alt	867410	898284	chr6_GL000253v2_alt:867410-898284	1	-	868723	897534	789624	22	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,204,85,286,	0,2264,2630,3339,4161,4668,4873,6372,7000,8690,10316,11009,18834,19485,19837,21038,21623,25219,26820,29132,30039,30588,
#Deleted in new
chr6_GL000253v2_alt	867410	893157	chr6_GL000253v2_alt:867410-893157	1	-	868723	892935	0	18	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,528,	0,2264,2630,3339,4161,4668,4873,6372,7000,8690,10316,11009,18834,19485,19837,21038,21623,25219,
#Deleted in new
chr6_GL000253v2_alt	867410	898083	chr6_GL000253v2_alt:867410-898083	0	-	867410	867410	8553170	23	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,122,204,85,85,	0,2264,2630,3339,4161,4668,4873,6372,7000,8690,10316,11009,18834,19485,19837,21038,21623,25219,26820,28258,29132,30039,30588,
#Deleted in new
chr6_GL000253v2_alt	867410	873915	chr6_GL000253v2_alt:867410-873915	0	-	867410	867410	8553170	5	1350,94,108,117,133,	0,4161,4668,4873,6372,
#Deleted in new
chr6_GL000253v2_alt	868494	870330	chr6_GL000253v2_alt:868494-870330	0	-	868494	868494	8553170	3	403,144,290,	0,1180,1546,
#Deleted in new
chr6_GL000253v2_alt	870093	897534	chr6_GL000253v2_alt:870093-897534	2	-	870093	870093	8553170	19	76,128,94,108,117,133,78,64,243,192,66,102,171,135,161,21,186,204,85,	0,656,1478,1985,2190,3689,6007,7633,8326,16151,16802,17154,18355,18940,22536,24137,25511,26449,27356,
#Deleted in new
chr6_GL000253v2_alt	870590	871770	chr6_GL000253v2_alt:870590-871770	0	-	870590	870590	8553170	2	287,199,	0,981,
#Deleted in new
chr6_GL000253v2_alt	873635	877775	chr6_GL000253v2_alt:873635-877775	0	-	873635	873635	8553170	3	280,78,49,	0,2465,4091,
#Deleted in new
chr6_GL000253v2_alt	873886	897536	chr6_GL000253v2_alt:873886-897536	1	-	873886	897534	789624	14	29,78,64,243,192,66,102,171,135,161,21,186,204,87,	0,2214,3840,4533,12358,13009,13361,14562,15147,18743,20344,21718,22656,23563,
#Deleted in new
chr6_GL000253v2_alt	886947	889405	chr6_GL000253v2_alt:886947-889405	0	-	886947	886947	8553170	4	14,102,171,372,	0,300,1501,2086,
#Deleted in new
chr6_GL000253v2_alt	895045	898216	chr6_GL000253v2_alt:895045-898216	0	-	895045	895045	8553170	4	745,204,85,218,	0,1497,2404,2953,
#Deleted in new
chr6_GL000253v2_alt	901181	901465	chr6_GL000253v2_alt:901181-901465	7	-	901181	901181	16724991	1	284,	0,
#Deleted in new
chr6_GL000253v2_alt	922097	937484	chr6_GL000253v2_alt:922097-937484	3	+	922326	936299	0	7	317,348,114,21,21,21,1199,	0,2337,9167,10659,10920,13717,14188,
#Deleted in new
chr6_GL000253v2_alt	922115	937486	chr6_GL000253v2_alt:922115-937486	1	+	922326	936299	0	8	299,348,114,21,21,117,21,1201,	0,2319,9149,10641,10902,13279,13699,14170,
#Deleted in new
chr6_GL000253v2_alt	922164	931373	chr6_GL000253v2_alt:922164-931373	0	+	922164	922164	8553170	3	250,343,109,	0,2275,9100,
#Deleted in new
chr6_GL000253v2_alt	922208	937486	chr6_GL000253v2_alt:922208-937486	1	+	922326	935993	0	7	206,348,114,21,21,117,1672,	0,2226,9056,10548,10809,13186,13606,
#Deleted in new
chr6_GL000253v2_alt	922246	925040	chr6_GL000253v2_alt:922246-925040	0	+	922246	922246	8553170	2	168,606,	0,2188,
#Deleted in new
chr6_GL000253v2_alt	922326	937486	chr6_GL000253v2_alt:922326-937486	1	+	922326	936564	789624	8	88,348,114,21,21,117,21,951,	0,2108,8938,10430,10691,13068,13488,14209,
#Deleted in new
chr6_GL000253v2_alt	922326	937486	chr6_GL000253v2_alt:922326-937486	1	+	922326	936299	0	7	88,114,21,21,117,21,1201,	0,8938,10430,10691,13068,13488,13959,
#Deleted in new
chr6_GL000253v2_alt	922326	937486	chr6_GL000253v2_alt:922326-937486	1	+	922326	936564	0	7	88,348,114,21,21,21,951,	0,2108,8938,10430,10691,13488,14209,
#Deleted in new
chr6_GL000253v2_alt	922326	937486	chr6_GL000253v2_alt:922326-937486	1	+	922326	936299	0	8	88,348,114,21,21,48,21,1201,	0,2108,8938,10430,10691,12961,13488,13959,
#Deleted in new
chr6_GL000253v2_alt	922326	937486	chr6_GL000253v2_alt:922326-937486	1	+	922326	936564	0	8	88,348,114,21,21,48,21,951,	0,2108,8938,10430,10691,12961,13488,14209,
#Deleted in new
chr6_GL000253v2_alt	922332	937486	chr6_GL000253v2_alt:922332-937486	0	+	922332	936564	0	6	82,348,114,21,21,951,	0,2102,8932,10424,10685,14203,
#Deleted in new
chr6_GL000253v2_alt	924434	937486	chr6_GL000253v2_alt:924434-937486	0	+	924434	936299	789624	6	348,114,21,21,21,1201,	0,6830,8322,8583,11380,11851,
#Deleted in new
chr6_GL000253v2_alt	924434	937486	chr6_GL000253v2_alt:924434-937486	0	+	924434	924434	8553170	8	348,138,114,21,21,117,21,1201,	0,5308,6830,8322,8583,10960,11380,11851,
#Deleted in new
chr6_GL000253v2_alt	924434	937486	chr6_GL000253v2_alt:924434-937486	0	+	924434	924434	8553170	8	348,138,114,21,21,117,21,951,	0,5308,6830,8322,8583,10960,11380,12101,
#Deleted in new
chr6_GL000253v2_alt	937505	942269	chr6_GL000253v2_alt:937505-942269	1	-	937613	942118	789624	4	1367,102,127,274,	0,2994,3541,4490,
#Deleted in new
chr6_GL000253v2_alt	937596	946215	chr6_GL000253v2_alt:937596-946215	3	-	937613	942118	789624	6	1276,102,127,33,393,49,	0,2903,3450,4399,4492,8570,
#Deleted in new
chr6_GL000253v2_alt	937613	942417	chr6_GL000253v2_alt:937613-942417	1	-	937613	942417	789624	4	1126,67,145,21,	0,2921,3433,4783,
#Deleted in new
chr6_GL000253v2_alt	973223	973646	chr6_GL000253v2_alt:973223-973646	7	-	973223	973223	16724991	1	423,	0,
#Deleted in new
chr6_GL000253v2_alt	985436	989188	chr6_GL000253v2_alt:985436-989188	1	+	986125	989069	789624	8	226,222,270,276,276,117,33,124,	0,531,883,1398,2256,2672,3236,3628,
#Deleted in new
chr6_GL000253v2_alt	985642	986633	chr6_GL000253v2_alt:985642-986633	7	-	985642	985642	16724991	1	991,	0,
#Deleted in new
chr6_GL000253v2_alt	985940	986893	chr6_GL000253v2_alt:985940-986893	0	+	986125	986893	789624	3	249,270,59,	0,379,894,
#Deleted in new
chr6_GL000253v2_alt	986001	989187	chr6_GL000253v2_alt:986001-989187	1	+	986125	989069	789624	7	188,270,276,276,117,33,123,	0,318,833,1691,2107,2671,3063,
#Deleted in new
chr6_GL000253v2_alt	986053	987077	chr6_GL000253v2_alt:986053-987077	0	+	986053	986053	8553170	2	536,243,	0,781,
#Deleted in new
chr6_GL000253v2_alt	986069	989960	chr6_GL000253v2_alt:986069-989960	3	+	986125	989839	789624	7	120,270,276,276,117,33,414,	0,250,765,1623,2039,2603,3477,
#Deleted in new
chr6_GL000253v2_alt	986088	989188	chr6_GL000253v2_alt:986088-989188	0	+	986088	986088	8553170	5	28,187,117,33,124,	0,1693,2020,2584,2976,
#Deleted in new
chr6_GL000253v2_alt	986095	987749	chr6_GL000253v2_alt:986095-987749	0	+	986095	986095	8553170	4	94,158,276,57,	0,336,739,1597,
#Deleted in new
chr6_GL000253v2_alt	986125	989188	chr6_GL000253v2_alt:986125-989188	1	+	986125	989069	0	6	64,270,276,117,33,124,	0,194,709,1983,2547,2939,
#Deleted in new
chr6_GL000253v2_alt	986165	987014	chr6_GL000253v2_alt:986165-987014	0	+	986165	986165	8553170	2	424,163,	0,686,
#Deleted in new
chr6_GL000253v2_alt	986601	987961	chr6_GL000253v2_alt:986601-987961	0	+	986601	986601	8553170	2	509,269,	0,1091,
#Deleted in new
chr6_GL000253v2_alt	986700	989188	chr6_GL000253v2_alt:986700-989188	0	+	986700	989069	789624	6	44,202,276,117,33,124,	0,208,992,1408,1972,2364,
#Deleted in new
chr6_GL000253v2_alt	986818	989188	chr6_GL000253v2_alt:986818-989188	0	+	986818	986818	8553170	4	292,276,117,516,	0,874,1290,1854,
#Deleted in new
chr6_GL000253v2_alt	987715	1001192	chr6_GL000253v2_alt:987715-1001192	0	+	987715	987715	8553170	5	253,117,33,67,153,	0,393,957,13070,13324,
#Deleted in new
chr6_GL000253v2_alt	988115	992015	chr6_GL000253v2_alt:988115-992015	0	+	988115	988115	8553170	2	110,1395,	0,2505,
#Deleted in new
chr6_GL000253v2_alt	988195	989960	chr6_GL000253v2_alt:988195-989960	0	+	988195	989839	789624	3	30,51,414,	0,459,1351,
#Deleted in new
chr6_GL000253v2_alt	989264	1011714	chr6_GL000253v2_alt:989264-1011714	0	-	989264	989264	789624	6	539,131,471,336,278,150,	0,1764,11365,11950,20554,22300,
#Deleted in new
chr6_GL000253v2_alt	989332	989803	chr6_GL000253v2_alt:989332-989803	7	-	989332	989332	16724991	1	471,	0,
#Deleted in new
chr6_GL000253v2_alt	997701	1011658	chr6_GL000253v2_alt:997701-1011658	3	-	997701	997701	8553170	6	1786,236,121,336,255,94,	0,2928,3297,3513,10434,13863,
#Deleted in new
chr6_GL000253v2_alt	1000422	1001108	chr6_GL000253v2_alt:1000422-1001108	0	-	1000422	1000422	8553170	2	443,110,	0,576,
#Deleted in new
chr6_GL000253v2_alt	1004393	1011634	chr6_GL000253v2_alt:1004393-1011634	7	-	1004393	1004393	16724991	6	125,144,278,285,255,70,	0,2278,2536,3219,3742,7171,
#Deleted in new
chr6_GL000253v2_alt	1010953	1011178	chr6_GL000253v2_alt:1010953-1011178	7	+	1010953	1010953	16724991	1	225,	0,
#Deleted in new
chr6_GL000253v2_alt	1013034	1013136	chr6_GL000253v2_alt:1013034-1013136	3	+	1013034	1013034	8553170	1	102,	0,
#Deleted in new
chr6_GL000253v2_alt	1013390	1013811	chr6_GL000253v2_alt:1013390-1013811	7	-	1013390	1013390	16724991	1	421,	0,
#Deleted in new
chr6_GL000253v2_alt	1053435	1055346	chr6_GL000253v2_alt:1053435-1055346	5	+	1053435	1053435	16724991	4	14,68,254,334,	0,847,1192,1577,
#Deleted in new
chr6_GL000253v2_alt	1053529	1055677	chr6_GL000253v2_alt:1053529-1055677	4	+	1053529	1053529	16724991	4	33,68,81,665,	0,753,1271,1483,
#Deleted in new
chr6_GL000253v2_alt	1053927	1060310	chr6_GL000253v2_alt:1053927-1060310	7	+	1053927	1053927	16724991	7	47,68,196,450,191,2115,460,	0,355,758,1085,1999,2361,5923,
#Deleted in new
chr6_GL000253v2_alt	1054328	1055326	chr6_GL000253v2_alt:1054328-1055326	7	-	1054328	1054328	16724991	1	998,	0,
#Deleted in new
chr6_GL000253v2_alt	1054481	1060310	chr6_GL000253v2_alt:1054481-1060310	5	+	1054481	1054481	16724991	3	400,270,619,	0,531,5210,
#Deleted in new
chr6_GL000253v2_alt	1054798	1060310	chr6_GL000253v2_alt:1054798-1060310	5	+	1054798	1054798	16724991	3	83,270,4384,	0,214,1128,
#Deleted in new
chr6_GL000253v2_alt	1054809	1055712	chr6_GL000253v2_alt:1054809-1055712	5	+	1054809	1054809	16724991	3	72,270,192,	0,203,711,
#Deleted in new
chr6_GL000253v2_alt	1062913	1064922	chr6_GL000253v2_alt:1062913-1064922	7	+	1062913	1062913	16724991	5	258,276,117,37,46,	0,847,1247,1776,1963,
#Deleted in new
chr6_GL000253v2_alt	1065693	1066490	chr6_GL000253v2_alt:1065693-1066490	7	-	1065693	1065693	16724991	1	797,	0,
#Deleted in new
chr6_GL000253v2_alt	1075062	1075194	chr6_GL000253v2_alt:1075062-1075194	7	-	1075062	1075062	16724991	1	132,	0,
#Deleted in new
chr6_GL000253v2_alt	1089453	1093611	chr6_GL000253v2_alt:1089453-1093611	3	+	1089525	1092868	789624	8	78,82,270,276,276,117,33,358,	0,868,1079,1575,2450,2848,3410,3800,
#Deleted in new
chr6_GL000253v2_alt	1089465	1093608	chr6_GL000253v2_alt:1089465-1093608	1	+	1090330	1092868	0	8	66,185,270,276,276,117,33,355,	0,753,1067,1563,2438,2836,3398,3788,
#Deleted in new
chr6_GL000253v2_alt	1089870	1090850	chr6_GL000253v2_alt:1089870-1090850	7	-	1089870	1089870	16724991	1	980,	0,
#Deleted in new
chr6_GL000253v2_alt	1090306	1093611	chr6_GL000253v2_alt:1090306-1093611	1	+	1090330	1092868	0	7	97,270,276,276,117,33,358,	0,226,722,1597,1995,2557,2947,
#Deleted in new
chr6_GL000253v2_alt	1090330	1093611	chr6_GL000253v2_alt:1090330-1093611	1	+	1090330	1092868	789624	6	73,270,276,117,33,358,	0,202,1573,1971,2533,2923,
#Deleted in new
chr6_GL000253v2_alt	1090330	1093611	chr6_GL000253v2_alt:1090330-1093611	1	+	1090330	1092868	0	5	73,270,117,33,358,	0,202,1971,2533,2923,
#Deleted in new
chr6_GL000253v2_alt	1090330	1093611	chr6_GL000253v2_alt:1090330-1093611	0	+	1090330	1090330	8553170	6	73,270,276,515,33,358,	0,202,698,1573,2533,2923,
#Deleted in new
chr6_GL000253v2_alt	1090330	1093611	chr6_GL000253v2_alt:1090330-1093611	0	+	1090330	1092868	789624	7	73,270,276,117,33,48,358,	0,202,1573,1971,2533,2708,2923,
#Deleted in new
chr6_GL000253v2_alt	1114488	1114617	chr6_GL000253v2_alt:1114488-1114617	7	-	1114488	1114488	16724991	1	129,	0,
#Deleted in new
chr6_GL000253v2_alt	1143745	1144708	chr6_GL000253v2_alt:1143745-1144708	7	-	1143745	1143745	16724991	1	963,	0,
#Deleted in new
chr6_GL000253v2_alt	1144203	1146920	chr6_GL000253v2_alt:1144203-1146920	7	+	1144203	1144203	16724991	7	67,270,276,275,117,33,44,	0,191,703,1564,1941,2498,2673,
#Deleted in new
chr6_GL000253v2_alt	1152987	1154119	chr6_GL000253v2_alt:1152987-1154119	7	+	1152987	1152987	16724991	4	272,102,37,39,	0,397,908,1093,
#Deleted in new
chr6_GL000253v2_alt	1162876	1163243	chr6_GL000253v2_alt:1162876-1163243	7	+	1162876	1162876	16724991	2	135,57,	0,310,
#Deleted in new
chr6_GL000253v2_alt	1164116	1164979	chr6_GL000253v2_alt:1164116-1164979	7	-	1164116	1164116	16724991	2	161,167,	0,696,
#Deleted in new
chr6_GL000253v2_alt	1182346	1183337	chr6_GL000253v2_alt:1182346-1183337	7	-	1182346	1182346	16724991	1	991,	0,
#Deleted in new
chr6_GL000253v2_alt	1182822	1185596	chr6_GL000253v2_alt:1182822-1185596	7	+	1182822	1182822	16724991	6	72,261,275,265,114,47,	0,201,719,1605,1999,2727,
#Deleted in new
chr6_GL000253v2_alt	1188707	1188893	chr6_GL000253v2_alt:1188707-1188893	7	+	1188707	1188707	16724991	1	186,	0,
#Deleted in new
chr6_GL000253v2_alt	1195800	1200442	chr6_GL000253v2_alt:1195800-1200442	3	+	1197095	1200013	789624	10	60,131,223,270,276,276,117,33,48,434,	0,707,1145,1497,2008,2884,3259,3816,3991,4208,
#Deleted in new
chr6_GL000253v2_alt	1196616	1197608	chr6_GL000253v2_alt:1196616-1197608	7	-	1196616	1196616	16724991	1	992,	0,
#Deleted in new
chr6_GL000253v2_alt	1196786	1200442	chr6_GL000253v2_alt:1196786-1200442	0	+	1197095	1199193	789624	8	382,270,276,276,137,33,48,434,	0,511,1022,1898,2273,2830,3005,3222,
#Deleted in new
chr6_GL000253v2_alt	1197011	1200442	chr6_GL000253v2_alt:1197011-1200442	1	+	1197095	1200013	789624	8	157,270,276,276,117,33,48,434,	0,286,797,1673,2048,2605,2780,2997,
#Deleted in new
chr6_GL000253v2_alt	1197089	1200442	chr6_GL000253v2_alt:1197089-1200442	0	+	1197089	1197089	8553170	7	79,98,259,276,590,48,434,	0,208,736,1595,1970,2702,2919,
#Deleted in new
chr6_GL000253v2_alt	1197090	1200442	chr6_GL000253v2_alt:1197090-1200442	1	+	1197095	1200013	789624	5	78,270,276,276,434,	0,207,718,1594,2918,
#Deleted in new
chr6_GL000253v2_alt	1197093	1200442	chr6_GL000253v2_alt:1197093-1200442	0	+	1197093	1197093	8553170	7	75,787,276,117,29,48,434,	0,204,1591,1966,2527,2698,2915,
#Deleted in new
chr6_GL000253v2_alt	1197095	1199839	chr6_GL000253v2_alt:1197095-1199839	0	+	1197095	1197095	8553170	6	73,787,276,137,33,48,	0,202,1589,1964,2521,2696,
#Deleted in new
chr6_GL000253v2_alt	1197095	1199839	chr6_GL000253v2_alt:1197095-1199839	0	+	1197095	1197095	8553170	6	73,787,276,117,33,48,	0,202,1589,1964,2521,2696,
#Deleted in new
chr6_GL000253v2_alt	1197095	1199838	chr6_GL000253v2_alt:1197095-1199838	1	+	1197095	1199838	789624	6	73,270,276,276,33,47,	0,202,713,1589,2521,2696,
#Deleted in new
chr6_GL000253v2_alt	1217354	1219320	chr6_GL000253v2_alt:1217354-1219320	7	+	1217354	1217354	16724991	5	261,275,154,37,46,	0,843,1234,1734,1920,
#Deleted in new
chr6_GL000253v2_alt	1231534	1233198	chr6_GL000253v2_alt:1231534-1233198	7	-	1231534	1231534	16724991	3	276,281,256,	0,887,1408,
#Deleted in new
chr6_GL000253v2_alt	1235851	1239146	chr6_GL000253v2_alt:1235851-1239146	3	+	1235851	1235851	789624	3	399,64,193,	0,2538,3102,
#Deleted in new
chr6_GL000253v2_alt	1253934	1254331	chr6_GL000253v2_alt:1253934-1254331	7	+	1253934	1253934	16724991	2	123,135,	0,262,
#Deleted in new
chr6_GL000253v2_alt	1255162	1256040	chr6_GL000253v2_alt:1255162-1256040	7	-	1255162	1255162	16724991	2	165,170,	0,708,
#Deleted in new
chr6_GL000253v2_alt	1261740	1321898	chr6_GL000253v2_alt:1261740-1321898	0	-	1261740	1261740	8553170	12	1722,202,174,119,43,279,106,95,203,68,76,183,	0,2157,6213,6514,7622,7883,8716,20674,33917,34925,57131,59975,
#Deleted in new
chr6_GL000253v2_alt	1261740	1321938	chr6_GL000253v2_alt:1261740-1321938	0	-	1261740	1261740	789624	6	1722,203,68,76,255,106,	0,33917,34925,57131,59754,60092,
#Deleted in new
chr6_GL000253v2_alt	1261740	1321682	chr6_GL000253v2_alt:1261740-1321682	0	-	1261740	1261740	8553170	3	1722,76,188,	0,57131,59754,
#Deleted in new
chr6_GL000253v2_alt	1261740	1321897	chr6_GL000253v2_alt:1261740-1321897	0	-	1261740	1261740	8553170	4	1722,95,76,403,	0,20674,57131,59754,
#Deleted in new
chr6_GL000253v2_alt	1266851	1267847	chr6_GL000253v2_alt:1266851-1267847	7	-	1266851	1266851	16724991	1	996,	0,
#Deleted in new
chr6_GL000253v2_alt	1267313	1270687	chr6_GL000253v2_alt:1267313-1270687	7	+	1267313	1267313	16724991	6	87,270,274,140,48,422,	0,217,1606,2455,2737,2952,
#Deleted in new
chr6_GL000253v2_alt	1267317	1270687	chr6_GL000253v2_alt:1267317-1270687	5	+	1267317	1267317	16724991	6	83,270,274,117,140,422,	0,213,1602,1998,2451,2948,
#Deleted in new
chr6_GL000253v2_alt	1267326	1270687	chr6_GL000253v2_alt:1267326-1270687	5	+	1267326	1267326	16724991	5	74,274,140,48,422,	0,1593,2442,2724,2939,
#Deleted in new
chr6_GL000253v2_alt	1267336	1270270	chr6_GL000253v2_alt:1267336-1270270	5	+	1267336	1267336	16724991	8	64,270,276,274,117,33,48,5,	0,194,712,1583,1979,2539,2714,2929,
#Deleted in new
chr6_GL000253v2_alt	1271559	1273004	chr6_GL000253v2_alt:1271559-1273004	0	-	1271559	1271559	8553170	1	1445,	0,
#Deleted in new
chr6_GL000253v2_alt	1272829	1295765	chr6_GL000253v2_alt:1272829-1295765	3	-	1272829	1272829	8553170	2	9680,108,	0,22828,
#Deleted in new
chr6_GL000253v2_alt	1280517	1322394	chr6_GL000253v2_alt:1280517-1322394	0	-	1280517	1280517	8553170	6	155,95,203,68,76,900,	0,1897,15140,16148,38354,40977,
#Deleted in new
chr6_GL000253v2_alt	1292462	1293753	chr6_GL000253v2_alt:1292462-1293753	7	+	1292462	1292462	16724991	2	436,548,	0,743,
#Deleted in new
chr6_GL000253v2_alt	1295684	1319504	chr6_GL000253v2_alt:1295684-1319504	0	-	1295684	1295684	8553170	4	176,68,76,380,	0,981,23187,23440,
#Deleted in new
chr6_GL000253v2_alt	1296179	1321943	chr6_GL000253v2_alt:1296179-1321943	0	-	1296179	1296179	8553170	4	554,627,76,449,	0,21668,22692,25315,
#Deleted in new
chr6_GL000253v2_alt	1296665	1296733	chr6_GL000253v2_alt:1296665-1296733	3	+	1296665	1296665	8553170	1	68,	0,
#Deleted in new
chr6_GL000253v2_alt	1315357	1321933	chr6_GL000253v2_alt:1315357-1321933	0	-	1315357	1315357	8553170	3	3117,76,101,	0,3514,6475,
#Deleted in new
chr6_GL000253v2_alt	1317509	1321733	chr6_GL000253v2_alt:1317509-1321733	0	-	1317509	1317509	8553170	3	965,76,2609,	0,1362,1615,
#Deleted in new
chr6_GL000253v2_alt	1318871	1318947	chr6_GL000253v2_alt:1318871-1318947	3	+	1318871	1318871	8553170	1	76,	0,
#Deleted in new
chr6_GL000253v2_alt	1319655	1325658	chr6_GL000253v2_alt:1319655-1325658	2	+	1319655	1319655	8553170	2	3432,237,	0,5766,
#Deleted in new
chr6_GL000253v2_alt	1321833	1321937	chr6_GL000253v2_alt:1321833-1321937	3	+	1321833	1321833	8553170	1	104,	0,
#Deleted in new
chr6_GL000253v2_alt	1322007	1325658	chr6_GL000253v2_alt:1322007-1325658	1	+	1322278	1325446	789624	4	416,101,110,237,	0,663,970,3414,
#Deleted in new
chr6_GL000253v2_alt	1322010	1325658	chr6_GL000253v2_alt:1322010-1325658	1	+	1322278	1325446	789624	5	133,155,101,110,237,	0,258,660,967,3411,
#Deleted in new
chr6_GL000253v2_alt	1322012	1325658	chr6_GL000253v2_alt:1322012-1325658	1	+	1322278	1325446	789624	5	140,155,101,110,237,	0,256,658,965,3409,
#Deleted in new
chr6_GL000253v2_alt	1322016	1325658	chr6_GL000253v2_alt:1322016-1325658	1	+	1322278	1325446	789624	5	151,155,101,110,237,	0,252,654,961,3405,
#Deleted in new
chr6_GL000253v2_alt	1322083	1325658	chr6_GL000253v2_alt:1322083-1325658	0	+	1322083	1322083	789624	4	69,155,110,237,	0,185,894,3338,
#Deleted in new
chr6_GL000253v2_alt	1327457	1331083	chr6_GL000253v2_alt:1327457-1331083	3	+	1329426	1330056	789624	3	301,109,1230,	0,1882,2396,
#Deleted in new
chr6_GL000253v2_alt	1327954	1331083	chr6_GL000253v2_alt:1327954-1331083	1	+	1329426	1330056	789624	4	275,75,109,1230,	0,1074,1385,1899,
#Deleted in new
chr6_GL000253v2_alt	1327954	1331083	chr6_GL000253v2_alt:1327954-1331083	1	+	1328160	1330056	789624	3	275,109,1230,	0,1385,1899,
#Deleted in new
chr6_GL000253v2_alt	1328292	1331083	chr6_GL000253v2_alt:1328292-1331083	1	+	1329426	1330056	789624	4	122,75,109,1230,	0,736,1047,1561,
#Deleted in new
chr6_GL000253v2_alt	1328325	1331083	chr6_GL000253v2_alt:1328325-1331083	1	+	1329426	1330056	789624	4	50,75,109,1230,	0,703,1014,1528,
#Deleted in new
chr6_GL000253v2_alt	1328955	1331083	chr6_GL000253v2_alt:1328955-1331083	1	+	1329426	1330056	789624	2	493,1230,	0,898,
#Deleted in new
chr6_GL000253v2_alt	1331015	1336599	chr6_GL000253v2_alt:1331015-1336599	3	-	1331860	1336539	789624	5	935,293,92,23,627,	0,1133,2891,3190,4957,
#Deleted in new
chr6_GL000253v2_alt	1331015	1336637	chr6_GL000253v2_alt:1331015-1336637	1	-	1331860	1336539	789624	4	1426,92,23,665,	0,2891,3190,4957,
#Deleted in new
chr6_GL000253v2_alt	1363613	1373816	chr6_GL000253v2_alt:1363613-1373816	3	-	1364252	1373515	0	9	893,66,75,116,23,231,96,500,43,	0,1205,2271,5157,6124,7545,8744,9485,10160,
#Deleted in new
chr6_GL000253v2_alt	1363613	1373600	chr6_GL000253v2_alt:1363613-1373600	0	-	1363613	1363613	789624	7	893,66,75,72,231,96,502,	0,1205,2271,5157,7545,8744,9485,
#Deleted in new
chr6_GL000253v2_alt	1363613	1366374	chr6_GL000253v2_alt:1363613-1366374	0	-	1363613	1363613	8553170	4	349,318,66,490,	0,575,1205,2271,
#Deleted in new
chr6_GL000253v2_alt	1364078	1371232	chr6_GL000253v2_alt:1364078-1371232	0	-	1364078	1364078	8553170	6	428,66,75,72,23,74,	0,740,1806,4692,5659,7080,
#Deleted in new
chr6_GL000253v2_alt	1364589	1368917	chr6_GL000253v2_alt:1364589-1368917	0	-	1364589	1364589	8553170	3	295,75,147,	0,1295,4181,
#Deleted in new
chr6_GL000253v2_alt	1364647	1366157	chr6_GL000253v2_alt:1364647-1366157	0	-	1364647	1364647	8553170	2	237,273,	0,1237,
#Deleted in new
chr6_GL000253v2_alt	1365912	1372896	chr6_GL000253v2_alt:1365912-1372896	0	-	1365912	1365912	8553170	6	47,116,23,231,96,107,	0,2858,3825,5246,6445,6877,
#Deleted in new
chr6_GL000253v2_alt	1365956	1375434	chr6_GL000253v2_alt:1365956-1375434	3	+	1365956	1365956	789624	4	148,125,122,154,	0,2424,6471,9324,
#Deleted in new
chr6_GL000253v2_alt	1369457	1372416	chr6_GL000253v2_alt:1369457-1372416	0	-	1369457	1369457	8553170	3	303,231,59,	0,1701,2900,
#Deleted in new
chr6_GL000253v2_alt	1371927	1373185	chr6_GL000253v2_alt:1371927-1373185	0	-	1371927	1371927	8553170	2	526,87,	0,1171,
#Deleted in new
chr6_GL000253v2_alt	1443521	1443683	chr6_GL000253v2_alt:1443521-1443683	3	-	1443521	1443521	8553170	1	162,	0,
#Deleted in new
chr6_GL000253v2_alt	1446829	1459457	chr6_GL000253v2_alt:1446829-1459457	1	+	1447758	1458534	789624	6	82,649,96,225,23,1011,	0,625,9886,10877,11412,11617,
#Deleted in new
chr6_GL000253v2_alt	1446845	1447920	chr6_GL000253v2_alt:1446845-1447920	0	+	1446845	1446845	8553170	2	475,466,	0,609,
#Deleted in new
chr6_GL000253v2_alt	1447452	1459457	chr6_GL000253v2_alt:1447452-1459457	1	+	1447758	1458534	789624	5	651,96,225,23,1011,	0,9263,10254,10789,10994,
#Deleted in new
chr6_GL000253v2_alt	1447731	1459457	chr6_GL000253v2_alt:1447731-1459457	3	+	1447758	1458534	789624	5	372,96,138,23,1011,	0,8984,10062,10510,10715,
#Deleted in new
chr6_GL000253v2_alt	1462666	1471655	chr6_GL000253v2_alt:1462666-1471655	1	-	1464690	1471579	789624	7	2542,33,116,23,231,96,505,	0,3782,4994,5424,6453,7204,8484,
#Deleted in new
chr6_GL000253v2_alt	1462666	1471655	chr6_GL000253v2_alt:1462666-1471655	3	-	1464409	1471579	789624	8	1827,176,33,116,23,231,96,505,	0,2366,3782,4994,5424,6453,7204,8484,
#Deleted in new
chr6_GL000253v2_alt	1473907	1483391	chr6_GL000253v2_alt:1473907-1483391	3	+	1474593	1483051	789624	8	860,96,231,9,14,116,33,858,	0,3970,5094,6035,6633,7295,7770,8626,
#Deleted in new
chr6_GL000253v2_alt	1473917	1483398	chr6_GL000253v2_alt:1473917-1483398	1	+	1474386	1483051	789624	7	850,96,231,23,116,33,865,	0,3960,5084,6025,7285,7760,8616,
#Deleted in new
chr6_GL000253v2_alt	1474386	1483387	chr6_GL000253v2_alt:1474386-1483387	1	+	1474386	1483309	789624	2	306,120,	0,8881,
#Deleted in new
chr6_GL000253v2_alt	1479014	1482657	chr6_GL000253v2_alt:1479014-1482657	0	+	1479014	1482657	789624	5	218,23,116,33,101,	0,928,2188,2663,3542,
#Deleted in new
chr6_GL000253v2_alt	1479058	1483398	chr6_GL000253v2_alt:1479058-1483398	0	+	1479058	1479058	8553170	6	174,23,116,33,65,124,	0,884,2144,2619,3475,4216,
#Deleted in new
chr6_GL000253v2_alt	1481014	1481799	chr6_GL000253v2_alt:1481014-1481799	0	+	1481014	1481014	8553170	2	304,122,	0,663,
#Deleted in new
chr6_GL000253v2_alt	1495110	1524019	chr6_GL000253v2_alt:1495110-1524019	1	-	1496531	1509759	789624	10	2104,33,116,23,231,96,599,104,110,62,	0,4719,4970,5566,12061,13974,14211,16579,20200,28847,
#Deleted in new
chr6_GL000253v2_alt	1495110	1524080	chr6_GL000253v2_alt:1495110-1524080	1	-	1496531	1509759	789624	9	2104,33,116,23,231,96,488,104,123,	0,4719,4970,5566,12061,13974,14211,16579,28847,
#Deleted in new
chr6_GL000253v2_alt	1495110	1515420	chr6_GL000253v2_alt:1495110-1515420	1	-	1496531	1509759	789624	9	2104,33,116,23,231,96,488,49,110,	0,4719,4970,5566,12061,13974,14211,16579,20200,
#Deleted in new
chr6_GL000253v2_alt	1495110	1501058	chr6_GL000253v2_alt:1495110-1501058	2	-	1495110	1495110	8553170	3	2104,33,978,	0,4719,4970,
#Deleted in new
chr6_GL000253v2_alt	1497455	1499277	chr6_GL000253v2_alt:1497455-1499277	7	-	1497455	1497455	16724991	2	840,363,	0,1459,
#Deleted in new
chr6_GL000253v2_alt	1507191	1524072	chr6_GL000253v2_alt:1507191-1524072	0	-	1507191	1509759	789624	6	211,96,488,104,110,115,	0,1893,2130,4498,8119,16766,
#Deleted in new
chr6_GL000253v2_alt	1507234	1515376	chr6_GL000253v2_alt:1507234-1515376	0	-	1507234	1509759	789624	5	168,96,263,89,66,	0,1850,2312,4455,8076,
#Deleted in new
chr6_GL000253v2_alt	1509146	1524038	chr6_GL000253v2_alt:1509146-1524038	0	-	1509146	1509759	789624	3	34,488,81,	0,175,14811,
#Deleted in new
chr6_GL000253v2_alt	1509393	1524019	chr6_GL000253v2_alt:1509393-1524019	0	-	1509393	1509759	789624	3	410,110,62,	0,5917,14564,
#Deleted in new
chr6_GL000253v2_alt	1509419	1524018	chr6_GL000253v2_alt:1509419-1524018	0	-	1509419	1509419	8553170	4	227,104,110,61,	0,2270,5891,14538,
#Deleted in new
chr6_GL000253v2_alt	1544683	1636359	chr6_GL000253v2_alt:1544683-1636359	3	-	1544683	1544683	789624	5	230,93,165,118,126,	0,319,7691,19896,91550,
#Deleted in new
chr6_GL000253v2_alt	1544683	1545122	chr6_GL000253v2_alt:1544683-1545122	0	-	1544683	1544683	8553170	2	230,120,	0,319,
#Deleted in new
chr6_GL000253v2_alt	1548945	1552507	chr6_GL000253v2_alt:1548945-1552507	7	+	1548945	1548945	16724991	3	405,96,252,	0,2958,3310,
#Deleted in new
chr6_GL000253v2_alt	1569833	1577184	chr6_GL000253v2_alt:1569833-1577184	7	+	1569833	1569833	16724991	7	101,158,211,277,117,48,3676,	0,330,800,1605,1989,2694,3675,
#Deleted in new
chr6_GL000253v2_alt	1569851	1572568	chr6_GL000253v2_alt:1569851-1572568	5	+	1569851	1569851	16724991	6	83,270,280,277,117,41,	0,200,713,1587,1971,2676,
#Deleted in new
chr6_GL000253v2_alt	1601037	1636612	chr6_GL000253v2_alt:1601037-1636612	0	-	1601037	1601037	8553170	4	1809,494,106,34,	0,3681,5342,35541,
#Deleted in new
chr6_GL000253v2_alt	1601249	1636611	chr6_GL000253v2_alt:1601249-1636611	0	-	1601249	1601249	8553170	4	1597,494,106,236,	0,3469,5130,35126,
#Deleted in new
chr6_GL000253v2_alt	1601249	1637076	chr6_GL000253v2_alt:1601249-1637076	0	-	1601249	1601249	789624	5	1597,494,106,214,498,	0,3469,5130,23243,35329,
#Deleted in new
chr6_GL000253v2_alt	1601249	1636572	chr6_GL000253v2_alt:1601249-1636572	0	-	1601249	1601249	8553170	3	3963,106,197,	0,5130,35126,
#Deleted in new
chr6_GL000253v2_alt	1601249	1636559	chr6_GL000253v2_alt:1601249-1636559	0	-	1601249	1601249	8553170	4	3963,106,214,326,	0,5130,23243,34984,
#Deleted in new
chr6_GL000253v2_alt	1601249	1637122	chr6_GL000253v2_alt:1601249-1637122	0	-	1601249	1601249	8553170	4	3963,106,214,38,	0,5130,23243,35835,
#Deleted in new
chr6_GL000253v2_alt	1601249	1637375	chr6_GL000253v2_alt:1601249-1637375	3	-	1601249	1601249	789624	3	3963,106,797,	0,5130,35329,
#Deleted in new
chr6_GL000253v2_alt	1601249	1636601	chr6_GL000253v2_alt:1601249-1636601	0	-	1601249	1601249	8553170	3	3963,106,368,	0,5130,34984,
#Deleted in new
chr6_GL000253v2_alt	1636703	1639977	chr6_GL000253v2_alt:1636703-1639977	0	+	1639543	1639977	789624	3	409,153,441,	0,2411,2833,
#Deleted in new
chr6_GL000253v2_alt	1637059	1639765	chr6_GL000253v2_alt:1637059-1639765	0	+	1639543	1639765	789624	4	161,45,153,229,	0,817,2055,2477,
#Deleted in new
chr6_GL000253v2_alt	1637068	1653960	chr6_GL000253v2_alt:1637068-1653960	1	+	1639543	1652490	0	8	152,153,460,96,231,23,116,2018,	0,2046,2468,3938,8907,13070,13667,14874,
#Deleted in new
chr6_GL000253v2_alt	1637068	1653959	chr6_GL000253v2_alt:1637068-1653959	1	+	1639543	1652490	0	9	152,153,460,96,231,23,90,116,2017,	0,2046,2468,3938,8907,13070,13434,13667,14874,
#Deleted in new
chr6_GL000253v2_alt	1637129	1646208	chr6_GL000253v2_alt:1637129-1646208	0	+	1639543	1646208	789624	5	91,133,460,96,233,	0,2005,2407,3877,8846,
#Deleted in new
chr6_GL000253v2_alt	1637144	1653960	chr6_GL000253v2_alt:1637144-1653960	1	+	1639543	1652490	0	9	76,45,133,460,96,231,23,116,2018,	0,732,1990,2392,3862,8831,12994,13591,14798,
#Deleted in new
chr6_GL000253v2_alt	1637181	1639721	chr6_GL000253v2_alt:1637181-1639721	0	+	1639543	1639721	789624	4	39,50,153,185,	0,690,1933,2355,
#Deleted in new
chr6_GL000253v2_alt	1637483	1653960	chr6_GL000253v2_alt:1637483-1653960	3	+	1639543	1652490	0	8	438,153,460,96,231,23,116,2018,	0,1631,2053,3523,8492,12655,13252,14459,
#Deleted in new
chr6_GL000253v2_alt	1637747	1639688	chr6_GL000253v2_alt:1637747-1639688	0	+	1639543	1639688	789624	3	174,133,152,	0,1387,1789,
#Deleted in new
chr6_GL000253v2_alt	1639114	1653960	chr6_GL000253v2_alt:1639114-1653960	1	+	1639543	1652490	0	8	153,460,96,231,23,90,116,2018,	0,422,1892,6861,11024,11388,11621,12828,
#Deleted in new
chr6_GL000253v2_alt	1639536	1657092	chr6_GL000253v2_alt:1639536-1657092	3	+	1639543	1657044	789624	10	460,96,231,23,116,185,101,83,126,146,	0,1470,6439,10602,11199,12406,15995,16188,17129,17410,
#Deleted in new
chr6_GL000253v2_alt	1639754	1651701	chr6_GL000253v2_alt:1639754-1651701	0	+	1639754	1651676	789624	6	242,96,231,23,34,82,	0,1252,6221,10384,10981,11865,
#Deleted in new
chr6_GL000253v2_alt	1655362	1657091	chr6_GL000253v2_alt:1655362-1657091	1	+	1655405	1657044	789624	5	100,101,107,126,145,	0,169,338,1303,1584,
#Deleted in new
chr6_GL000253v2_alt	1655365	1656727	chr6_GL000253v2_alt:1655365-1656727	0	+	1655365	1655365	8553170	4	97,101,439,62,	0,166,359,1300,
#Deleted in new
chr6_GL000253v2_alt	1655373	1657091	chr6_GL000253v2_alt:1655373-1657091	0	+	1655373	1655373	8553170	3	89,1260,145,	0,158,1573,
#Deleted in new
chr6_GL000253v2_alt	1655384	1657091	chr6_GL000253v2_alt:1655384-1657091	0	+	1655384	1655384	8553170	4	78,101,126,145,	0,147,1281,1562,
#Deleted in new
chr6_GL000253v2_alt	1655386	1657118	chr6_GL000253v2_alt:1655386-1657118	0	+	1655386	1655386	8553170	4	76,83,126,172,	0,338,1279,1560,
#Deleted in new
chr6_GL000253v2_alt	1655388	1657091	chr6_GL000253v2_alt:1655388-1657091	0	+	1655388	1655388	8553170	4	74,276,126,145,	0,143,1277,1558,
#Deleted in new
chr6_GL000253v2_alt	1655392	1657091	chr6_GL000253v2_alt:1655392-1657091	1	+	1655405	1657044	789624	4	240,83,126,145,	0,332,1273,1554,
#Deleted in new
chr6_GL000253v2_alt	1655392	1657091	chr6_GL000253v2_alt:1655392-1657091	1	+	1655405	1657044	789624	5	70,101,83,126,145,	0,139,332,1273,1554,
#Deleted in new
chr6_GL000253v2_alt	1655402	1657091	chr6_GL000253v2_alt:1655402-1657091	1	+	1655405	1657007	789624	5	60,101,83,133,145,	0,129,322,1263,1544,
#Deleted in new
chr6_GL000253v2_alt	1661649	1661784	chr6_GL000253v2_alt:1661649-1661784	7	+	1661649	1661649	16724991	1	135,	0,
#Deleted in new
chr6_GL000253v2_alt	1669512	1670146	chr6_GL000253v2_alt:1669512-1670146	7	-	1669512	1669512	16724991	1	634,	0,
#Deleted in new
chr6_GL000253v2_alt	1673344	1674513	chr6_GL000253v2_alt:1673344-1674513	7	-	1673344	1673344	16724991	1	1169,	0,
#Deleted in new
chr6_GL000253v2_alt	1724951	1729556	chr6_GL000253v2_alt:1724951-1729556	7	+	1724951	1724951	16724991	5	251,286,271,131,116,	0,517,1404,1791,4489,
#Deleted in new
chr6_GL000253v2_alt	1776686	1778229	chr6_GL000253v2_alt:1776686-1778229	7	+	1776686	1776686	16724991	2	414,853,	0,690,
#Deleted in new
chr6_GL000253v2_alt	1779116	1780486	chr6_GL000253v2_alt:1779116-1780486	7	+	1779116	1779116	16724991	1	1370,	0,
#Deleted in new
chr6_GL000253v2_alt	1796174	1796825	chr6_GL000253v2_alt:1796174-1796825	7	+	1796174	1796174	16724991	1	651,	0,
#Deleted in new
chr6_GL000253v2_alt	1799701	1804440	chr6_GL000253v2_alt:1799701-1804440	3	+	1799766	1802816	789624	8	129,270,276,276,117,33,43,1457,	0,259,773,1670,2070,2937,3074,3282,
#Deleted in new
chr6_GL000253v2_alt	1799744	1800600	chr6_GL000253v2_alt:1799744-1800600	0	+	1799744	1799744	8553170	2	86,640,	0,216,
#Deleted in new
chr6_GL000253v2_alt	1799746	1801518	chr6_GL000253v2_alt:1799746-1801518	0	+	1799746	1799746	8553170	3	484,276,147,	0,728,1625,
#Deleted in new
chr6_GL000253v2_alt	1826486	1829438	chr6_GL000253v2_alt:1826486-1829438	3	+	1826486	1826486	8553170	2	346,505,	0,2447,
#Deleted in new
chr6_GL000253v2_alt	1851605	1867403	chr6_GL000253v2_alt:1851605-1867403	3	-	1856300	1866432	789624	12	4937,141,163,179,195,96,208,72,152,137,166,1044,	0,5319,5735,5975,11090,11707,11973,13198,13387,13678,14178,14754,
#Deleted in new
chr6_GL000253v2_alt	1856713	1862775	chr6_GL000253v2_alt:1856713-1862775	0	-	1856713	1856713	8553170	4	352,163,179,80,	0,627,867,5982,
#Deleted in new
chr6_GL000253v2_alt	1857424	1858046	chr6_GL000253v2_alt:1857424-1858046	0	-	1857424	1857424	8553170	2	79,466,	0,156,
#Deleted in new
chr6_GL000253v2_alt	1862405	1863349	chr6_GL000253v2_alt:1862405-1863349	0	-	1862405	1862405	8553170	2	485,37,	0,907,
#Deleted in new
chr6_GL000253v2_alt	1863588	1866317	chr6_GL000253v2_alt:1863588-1866317	0	-	1863588	1866016	789624	5	198,72,152,137,534,	0,1215,1404,1695,2195,
#Deleted in new
chr6_GL000253v2_alt	1867114	1873952	chr6_GL000253v2_alt:1867114-1873952	3	+	1867573	1872724	789624	4	565,63,291,1335,	0,1264,4948,5503,
#Deleted in new
chr6_GL000253v2_alt	1867508	1873952	chr6_GL000253v2_alt:1867508-1873952	1	+	1867573	1872724	789624	3	171,291,1335,	0,4554,5109,
#Deleted in new
chr6_GL000253v2_alt	1867542	1873952	chr6_GL000253v2_alt:1867542-1873952	0	+	1867542	1867542	8553170	4	137,181,291,1335,	0,4014,4520,5075,
#Deleted in new
chr6_GL000253v2_alt	1867544	1873952	chr6_GL000253v2_alt:1867544-1873952	0	+	1867544	1867544	8553170	5	135,63,181,291,1335,	0,834,4012,4518,5073,
#Deleted in new
chr6_GL000253v2_alt	1867575	1868665	chr6_GL000253v2_alt:1867575-1868665	0	+	1867575	1867575	8553170	2	104,287,	0,803,
#Deleted in new
chr6_GL000253v2_alt	1870259	1873952	chr6_GL000253v2_alt:1870259-1873952	0	+	1870259	1870259	8553170	2	2094,1335,	0,2358,
#Deleted in new
chr6_GL000253v2_alt	1881604	1901660	chr6_GL000253v2_alt:1881604-1901660	3	+	1881716	1900930	789624	25	185,47,96,127,38,108,75,114,114,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,897,	0,6033,6442,6700,6972,7094,8555,9030,11018,11690,12232,12429,12816,13042,13884,14182,14503,14758,15098,15265,18312,18430,18773,18930,19159,
#Deleted in new
chr6_GL000253v2_alt	1881621	1901660	chr6_GL000253v2_alt:1881621-1901660	1	+	1881716	1900930	789624	24	168,47,96,127,38,108,75,114,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,897,	0,6016,6425,6683,6955,7077,8538,9013,11673,12215,12412,12799,13025,13867,14165,14486,14741,15081,15248,18295,18413,18756,18913,19142,
#Deleted in new
chr6_GL000253v2_alt	1881661	1893937	chr6_GL000253v2_alt:1881661-1893937	0	+	1881716	1893937	789624	11	128,47,96,130,38,108,75,114,114,123,101,	0,5976,6385,6640,6915,7037,8498,8973,10961,11633,12175,
#Deleted in new
chr6_GL000253v2_alt	1881670	1890677	chr6_GL000253v2_alt:1881670-1890677	0	+	1881670	1881670	8553170	7	119,96,127,38,108,75,43,	0,6376,6634,6906,7028,8489,8964,
#Deleted in new
chr6_GL000253v2_alt	1881680	1901660	chr6_GL000253v2_alt:1881680-1901660	1	+	1881716	1900930	789624	8	109,47,96,99,97,65,73,897,	0,5957,6366,6624,18426,18697,18854,19083,
#Deleted in new
chr6_GL000253v2_alt	1892693	1907409	chr6_GL000253v2_alt:1892693-1907409	0	+	1892693	1892693	8553170	18	43,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,627,611,	0,601,1143,1340,1727,1953,2795,3093,3414,3669,4009,4176,7223,7341,7684,7841,8070,14105,
#Deleted in new
chr6_GL000253v2_alt	1899657	1900972	chr6_GL000253v2_alt:1899657-1900972	0	+	1899657	1899657	8553170	4	546,65,73,209,	0,720,877,1106,
#Deleted in new
chr6_GL000253v2_alt	1910628	1927473	chr6_GL000253v2_alt:1910628-1927473	3	-	1911777	1920173	789624	20	1259,756,114,76,195,64,247,159,148,101,113,106,174,78,52,136,87,118,521,21,	0,1536,2446,2810,3072,3380,3608,3953,4188,4594,5523,5738,6068,6379,7440,8379,8677,9438,16078,16824,
#Deleted in new
chr6_GL000253v2_alt	1913801	1914441	chr6_GL000253v2_alt:1913801-1914441	0	-	1913801	1913801	8553170	2	271,205,	0,435,
#Deleted in new
chr6_GL000253v2_alt	1914840	1916227	chr6_GL000253v2_alt:1914840-1916227	0	-	1914840	1914840	8553170	2	483,76,	0,1311,
#Deleted in new
chr6_GL000253v2_alt	1915246	1916966	chr6_GL000253v2_alt:1915246-1916966	0	-	1915246	1915246	8553170	4	77,113,106,270,	0,905,1120,1450,
#Deleted in new
chr6_GL000253v2_alt	1916037	1916472	chr6_GL000253v2_alt:1916037-1916472	0	-	1916037	1916037	8553170	2	227,106,	0,329,
#Deleted in new
chr6_GL000253v2_alt	1920175	1927473	chr6_GL000253v2_alt:1920175-1927473	0	-	1920175	1920175	8553170	4	9,54,521,21,	0,4602,6531,7277,
#Deleted in new
chr6_GL000253v2_alt	1926812	1928841	chr6_GL000253v2_alt:1926812-1928841	0	-	1926812	1926812	8553170	2	415,55,	0,1974,
#Deleted in new
chr6_GL000253v2_alt	1927937	1936624	chr6_GL000253v2_alt:1927937-1936624	1	+	1928094	1936026	0	7	235,109,98,69,67,60,894,	0,1784,2000,2212,5123,7174,7793,
#Deleted in new
chr6_GL000253v2_alt	1928071	1930353	chr6_GL000253v2_alt:1928071-1930353	0	+	1928071	1928071	8553170	4	101,109,98,204,	0,1650,1866,2078,
#Deleted in new
chr6_GL000253v2_alt	1928080	1936624	chr6_GL000253v2_alt:1928080-1936624	0	+	1928080	1928080	8553170	5	92,497,67,60,894,	0,1641,4980,7031,7650,
#Deleted in new
chr6_GL000253v2_alt	1928088	1936624	chr6_GL000253v2_alt:1928088-1936624	3	+	1928094	1936026	789624	5	84,109,98,67,894,	0,1633,1849,4972,7642,
#Deleted in new
chr6_GL000253v2_alt	1928088	1936624	chr6_GL000253v2_alt:1928088-1936624	0	+	1928088	1928088	8553170	7	84,109,126,69,67,60,894,	0,1633,1821,2061,4972,7023,7642,
#Deleted in new
chr6_GL000253v2_alt	1937070	1954908	chr6_GL000253v2_alt:1937070-1954908	1	+	1937114	1953244	0	9	151,61,92,61,114,102,46,72,1912,	0,618,794,1009,1190,1487,13535,15334,15926,
#Deleted in new
chr6_GL000253v2_alt	1937084	1957052	chr6_GL000253v2_alt:1937084-1957052	3	+	1937114	1956872	0	13	137,61,92,61,114,102,46,69,72,244,80,43,355,	0,604,780,995,1176,1473,13521,13679,15320,15912,19039,19211,19613,
#Deleted in new
chr6_GL000253v2_alt	1937103	1954908	chr6_GL000253v2_alt:1937103-1954908	1	+	1937114	1953791	0	10	118,61,92,61,114,102,46,72,244,1151,	0,585,761,976,1157,1454,13502,15301,15893,16654,
#Deleted in new
chr6_GL000253v2_alt	1937104	1954908	chr6_GL000253v2_alt:1937104-1954908	1	+	1937114	1953244	0	10	117,61,92,61,114,102,46,69,72,1912,	0,584,760,975,1156,1453,13501,13659,15300,15892,
#Deleted in new
chr6_GL000253v2_alt	1937114	1957052	chr6_GL000253v2_alt:1937114-1957052	1	+	1937432	1956872	0	13	389,61,92,61,114,102,46,69,72,244,80,43,355,	0,574,750,965,1146,1443,13491,13649,15290,15882,19009,19181,19583,
#Deleted in new
chr6_GL000253v2_alt	1937114	1954908	chr6_GL000253v2_alt:1937114-1954908	1	+	1937114	1953791	0	11	107,61,92,61,114,102,46,69,72,244,1151,	0,574,750,965,1146,1443,13491,13649,15290,15882,16643,
#Deleted in new
chr6_GL000253v2_alt	1937121	1957052	chr6_GL000253v2_alt:1937121-1957052	0	+	1937121	1937121	8553170	12	100,61,92,61,114,102,46,69,72,80,43,355,	0,567,743,958,1139,1436,13484,13642,15283,19002,19174,19576,
#Deleted in new
chr6_GL000253v2_alt	1937143	1950927	chr6_GL000253v2_alt:1937143-1950927	0	+	1937143	1937143	8553170	8	78,61,92,61,114,102,46,164,	0,545,721,936,1117,1414,13462,13620,
#Deleted in new
chr6_GL000253v2_alt	1937148	1957052	chr6_GL000253v2_alt:1937148-1957052	0	+	1937148	1937148	789624	11	73,61,92,61,114,102,46,69,72,80,757,	0,540,716,931,1112,1409,13457,13615,15256,18975,19147,
#Deleted in new
chr6_GL000253v2_alt	1938628	1956631	chr6_GL000253v2_alt:1938628-1956631	0	+	1938628	1938628	8553170	6	31,46,72,80,43,128,	0,11977,13776,17495,17667,17875,
#Deleted in new
chr6_GL000253v2_alt	1943860	1944127	chr6_GL000253v2_alt:1943860-1944127	7	+	1943860	1943860	16724991	1	267,	0,
#Deleted in new
chr6_GL000253v2_alt	1952050	1957052	chr6_GL000253v2_alt:1952050-1957052	0	+	1952050	1952050	8553170	4	49,72,215,355,	0,354,4073,4647,
#Deleted in new
chr6_GL000253v2_alt	1953147	1957052	chr6_GL000253v2_alt:1953147-1957052	0	+	1953147	1953147	8553170	3	93,79,757,	0,2977,3148,
#Deleted in new
chr6_GL000253v2_alt	1957267	1961509	chr6_GL000253v2_alt:1957267-1961509	0	+	1957267	1957267	8553170	4	265,209,89,20,	0,2707,3950,4222,
#Deleted in new
chr6_GL000253v2_alt	1957283	1963333	chr6_GL000253v2_alt:1957283-1963333	0	+	1957283	1957283	8553170	6	249,402,107,201,70,308,	0,2498,3934,4206,5588,5742,
#Deleted in new
chr6_GL000253v2_alt	1957301	1963333	chr6_GL000253v2_alt:1957301-1963333	3	+	1957460	1963139	789624	6	231,402,89,201,70,308,	0,2480,3916,4188,5570,5724,
#Deleted in new
chr6_GL000253v2_alt	1957354	1962937	chr6_GL000253v2_alt:1957354-1962937	0	+	1957354	1957354	8553170	3	178,201,66,	0,4135,5517,
#Deleted in new
chr6_GL000253v2_alt	1957392	1963333	chr6_GL000253v2_alt:1957392-1963333	1	+	1957460	1963139	789624	5	140,89,201,70,308,	0,3825,4097,5479,5633,
#Deleted in new
chr6_GL000253v2_alt	1957414	1960137	chr6_GL000253v2_alt:1957414-1960137	0	+	1957414	1957414	8553170	3	118,241,356,	0,420,2367,
#Deleted in new
chr6_GL000253v2_alt	1957649	1963333	chr6_GL000253v2_alt:1957649-1963333	0	+	1957649	1963139	789624	6	426,402,89,201,70,308,	0,2132,3568,3840,5222,5376,
#Deleted in new
chr6_GL000253v2_alt	1961277	1963333	chr6_GL000253v2_alt:1961277-1963333	0	+	1961277	1961277	8553170	3	29,201,462,	0,212,1594,
#Deleted in new
chr6_GL000253v2_alt	1963342	1972236	chr6_GL000253v2_alt:1963342-1972236	1	-	1963465	1972109	789624	12	252,174,162,163,68,119,163,141,153,99,211,228,	0,1616,2085,2345,3108,3301,3507,3862,6382,6646,6942,8666,
#Deleted in new
chr6_GL000253v2_alt	1963342	1983290	chr6_GL000253v2_alt:1963342-1983290	3	-	1963465	1983094	789624	20	252,174,162,163,68,119,163,141,153,99,211,116,111,192,204,255,57,163,239,403,	0,1616,2085,2345,3108,3301,3507,3862,6382,6646,6942,9537,9821,11711,11981,12389,17320,17700,17946,19545,
#Deleted in new
chr6_GL000253v2_alt	1969725	1970830	chr6_GL000253v2_alt:1969725-1970830	0	-	1969725	1969725	8553170	3	152,99,546,	0,263,559,
#Deleted in new
chr6_GL000253v2_alt	1975382	1983241	chr6_GL000253v2_alt:1975382-1983241	0	-	1975382	1983235	789624	6	145,255,57,163,239,33,	0,349,5280,5660,5906,7826,
#Deleted in new
chr6_GL000253v2_alt	1986641	1998148	chr6_GL000253v2_alt:1986641-1998148	3	-	1987521	1996271	789624	3	900,211,3488,	0,2790,8019,
#Deleted in new
chr6_GL000253v2_alt	1986641	1997469	chr6_GL000253v2_alt:1986641-1997469	1	-	1987521	1996271	789624	4	900,211,1639,103,	0,2790,8019,10725,
#Deleted in new
chr6_GL000253v2_alt	1986641	1997411	chr6_GL000253v2_alt:1986641-1997411	0	-	1986641	1986641	8553170	3	900,211,45,	0,2790,10725,
#Deleted in new
chr6_GL000253v2_alt	1986641	1997446	chr6_GL000253v2_alt:1986641-1997446	0	-	1986641	1986641	8553170	4	900,211,137,80,	0,2790,8019,10725,
#Deleted in new
chr6_GL000253v2_alt	1998299	2001673	chr6_GL000253v2_alt:1998299-2001673	3	-	1998913	2001227	789624	5	896,177,197,440,45,	0,1229,2000,2795,3329,
#Deleted in new
chr6_GL000253v2_alt	1998299	2000976	chr6_GL000253v2_alt:1998299-2000976	0	-	1998913	2000976	789624	4	896,177,197,131,	0,1229,2000,2546,
#Deleted in new
chr6_GL000253v2_alt	1998299	2001229	chr6_GL000253v2_alt:1998299-2001229	1	-	1998913	2001227	789624	3	896,197,135,	0,2000,2795,
#Deleted in new
chr6_GL000253v2_alt	1998299	2001255	chr6_GL000253v2_alt:1998299-2001255	0	-	1998299	1998299	789624	4	896,177,219,161,	0,1229,1978,2795,
#Deleted in new
chr6_GL000253v2_alt	1998299	2001227	chr6_GL000253v2_alt:1998299-2001227	0	-	1998299	1998299	8553170	2	896,133,	0,2795,
#Deleted in new
chr6_GL000253v2_alt	1998299	2001239	chr6_GL000253v2_alt:1998299-2001239	0	-	1998299	1998299	8553170	3	896,219,145,	0,1978,2795,
#Deleted in new
chr6_GL000253v2_alt	1998299	2001220	chr6_GL000253v2_alt:1998299-2001220	0	-	1998299	1998299	789624	3	896,177,126,	0,1229,2795,
#Deleted in new
chr6_GL000253v2_alt	1998299	2000606	chr6_GL000253v2_alt:1998299-2000606	0	-	1998299	1998299	8553170	2	896,307,	0,2000,
#Deleted in new
chr6_GL000253v2_alt	1998302	2001561	chr6_GL000253v2_alt:1998302-2001561	1	-	1998913	2001227	789624	4	893,177,197,467,	0,1226,1997,2792,
#Deleted in new
chr6_GL000253v2_alt	2007057	2007787	chr6_GL000253v2_alt:2007057-2007787	7	-	2007057	2007057	16724991	1	730,	0,
#Deleted in new
chr6_GL000253v2_alt	2010058	2028140	chr6_GL000253v2_alt:2010058-2028140	3	-	2010716	2025426	0	15	826,111,126,183,120,2478,71,792,93,60,1481,70,381,139,645,	0,2746,2945,3297,3611,3814,7576,7758,11604,11859,12066,13840,13995,15232,17437,
#Deleted in new
chr6_GL000253v2_alt	2010566	2014333	chr6_GL000253v2_alt:2010566-2014333	0	-	2010566	2010566	8553170	5	318,111,126,183,664,	0,2238,2437,2789,3103,
#Deleted in new
chr6_GL000253v2_alt	2013318	2023435	chr6_GL000253v2_alt:2013318-2023435	3	+	2013318	2013318	789624	3	127,114,497,	0,9244,9620,
#Deleted in new
chr6_GL000253v2_alt	2015699	2022165	chr6_GL000253v2_alt:2015699-2022165	0	-	2015699	2022165	789624	5	651,71,93,60,41,	0,1935,5963,6218,6425,
#Deleted in new
chr6_GL000253v2_alt	2015833	2017936	chr6_GL000253v2_alt:2015833-2017936	0	-	2015833	2015833	8553170	2	517,302,	0,1801,
#Deleted in new
chr6_GL000253v2_alt	2021722	2022182	chr6_GL000253v2_alt:2021722-2022182	0	-	2021722	2021722	8553170	3	30,60,58,	0,195,402,
#Deleted in new
chr6_GL000253v2_alt	2023458	2027326	chr6_GL000253v2_alt:2023458-2027326	1	-	2023955	2025426	789624	7	147,70,20,107,153,139,194,	0,440,595,618,823,1832,3674,
#Deleted in new
chr6_GL000253v2_alt	2024083	2027426	chr6_GL000253v2_alt:2024083-2027426	0	-	2024083	2025426	789624	3	351,139,92,	0,1207,3251,
#Deleted in new
chr6_GL000253v2_alt	2024190	2027698	chr6_GL000253v2_alt:2024190-2027698	0	-	2024190	2025426	789624	3	244,139,199,	0,1100,3309,
#Deleted in new
chr6_GL000253v2_alt	2024230	2027372	chr6_GL000253v2_alt:2024230-2027372	0	-	2024230	2025426	789624	3	204,139,240,	0,1060,2902,
#Deleted in new
chr6_GL000253v2_alt	2030451	2035677	chr6_GL000253v2_alt:2030451-2035677	3	+	2030757	2034648	0	4	363,109,111,2087,	0,2336,2717,3139,
#Deleted in new
chr6_GL000253v2_alt	2031824	2035677	chr6_GL000253v2_alt:2031824-2035677	1	+	2033218	2034648	789624	4	325,109,111,2087,	0,963,1344,1766,
#Deleted in new
chr6_GL000253v2_alt	2031917	2035677	chr6_GL000253v2_alt:2031917-2035677	1	+	2032510	2034648	789624	4	596,109,111,2087,	0,870,1251,1673,
#Deleted in new
chr6_GL000253v2_alt	2031949	2035677	chr6_GL000253v2_alt:2031949-2035677	1	+	2033218	2034648	789624	4	516,109,111,2087,	0,838,1219,1641,
#Deleted in new
chr6_GL000253v2_alt	2037959	2041351	chr6_GL000253v2_alt:2037959-2041351	1	-	2038366	2041351	789624	5	437,165,138,46,182,	0,2313,2719,2973,3210,
#Deleted in new
chr6_GL000253v2_alt	2037959	2041351	chr6_GL000253v2_alt:2037959-2041351	2	-	2037959	2037959	8553170	4	437,165,138,419,	0,2313,2719,2973,
#Deleted in new
chr6_GL000253v2_alt	2037959	2041351	chr6_GL000253v2_alt:2037959-2041351	0	-	2037959	2037959	8553170	4	437,165,138,419,	0,2313,2719,2973,
#Deleted in new
chr6_GL000253v2_alt	2041169	2041351	chr6_GL000253v2_alt:2041169-2041351	0	-	2041169	2041351	789624	1	182,	0,
#Deleted in new
chr6_GL000253v2_alt	2041317	2041351	chr6_GL000253v2_alt:2041317-2041351	0	-	2041317	2041351	789624	1	34,	0,
#Deleted in new
chr6_GL000253v2_alt	2050501	2052608	chr6_GL000253v2_alt:2050501-2052608	0	-	2050501	2052586	789624	3	60,96,211,	0,245,1896,
#Deleted in new
chr6_GL000253v2_alt	2050501	2052527	chr6_GL000253v2_alt:2050501-2052527	0	-	2050501	2052440	789624	7	60,96,120,144,91,76,130,	0,245,428,939,1363,1541,1896,
#Deleted in new
chr6_GL000253v2_alt	2050501	2052984	chr6_GL000253v2_alt:2050501-2052984	0	-	2050501	2052440	789624	8	60,96,120,144,91,76,57,207,	0,245,428,939,1363,1541,1896,2276,
#Deleted in new
chr6_GL000253v2_alt	2050501	2052558	chr6_GL000253v2_alt:2050501-2052558	0	-	2050501	2052418	789624	5	60,96,120,144,161,	0,245,428,939,1896,
#Deleted in new
chr6_GL000253v2_alt	2050501	2052751	chr6_GL000253v2_alt:2050501-2052751	0	-	2050501	2052440	789624	8	60,96,120,144,91,76,57,117,	0,245,428,939,1363,1541,1896,2133,
#Deleted in new
chr6_GL000253v2_alt	2050501	2051045	chr6_GL000253v2_alt:2050501-2051045	0	-	2050501	2050501	8553170	2	60,299,	0,245,
#Deleted in new
chr6_GL000253v2_alt	2050501	2051104	chr6_GL000253v2_alt:2050501-2051104	0	-	2050501	2050501	8553170	3	60,96,175,	0,245,428,
#Deleted in new
chr6_GL000253v2_alt	2050501	2052983	chr6_GL000253v2_alt:2050501-2052983	0	-	2050501	2050501	8553170	7	60,96,120,144,76,57,206,	0,245,428,939,1541,1896,2276,
#Deleted in new
chr6_GL000253v2_alt	2050504	2052957	chr6_GL000253v2_alt:2050504-2052957	0	-	2050504	2050504	8553170	7	57,96,120,515,76,57,180,	0,242,425,936,1538,1893,2273,
#Deleted in new
chr6_GL000253v2_alt	2050505	2052454	chr6_GL000253v2_alt:2050505-2052454	0	-	2050505	2052440	789624	7	56,96,120,144,43,76,57,	0,241,424,935,1407,1537,1892,
#Deleted in new
chr6_GL000253v2_alt	2050759	2052775	chr6_GL000253v2_alt:2050759-2052775	0	-	2050759	2052440	789624	7	83,120,144,91,76,57,58,	0,170,681,1105,1283,1638,1958,
#Deleted in new
chr6_GL000253v2_alt	2051604	2052928	chr6_GL000253v2_alt:2051604-2052928	0	-	2051604	2051604	8553170	2	850,151,	0,1173,
#Deleted in new
chr6_GL000253v2_alt	2053449	2054799	chr6_GL000253v2_alt:2053449-2054799	1	-	2054352	2054769	789624	1	1350,	0,
#Deleted in new
chr6_GL000253v2_alt	2053449	2054805	chr6_GL000253v2_alt:2053449-2054805	3	-	2054186	2054769	789624	2	998,246,	0,1110,
#Deleted in new
chr6_GL000253v2_alt	2061278	2061530	chr6_GL000253v2_alt:2061278-2061530	3	+	2061278	2061278	8553170	1	252,	0,
#Deleted in new
chr6_GL000253v2_alt	2077066	2102492	chr6_GL000253v2_alt:2077066-2102492	3	+	2077066	2077066	789624	4	127,182,68,825,	0,21866,24064,24601,
#Deleted in new
chr6_GL000253v2_alt	2092199	2102492	chr6_GL000253v2_alt:2092199-2102492	0	+	2092199	2092199	8553170	3	169,182,825,	0,6733,9468,
#Deleted in new
chr6_GL000253v2_alt	2108895	2140904	chr6_GL000253v2_alt:2108895-2140904	0	-	2108895	2108895	8553170	2	119,145,	0,31864,
#Deleted in new
chr6_GL000253v2_alt	2123107	2140904	chr6_GL000253v2_alt:2123107-2140904	3	-	2123107	2123107	789624	2	1907,145,	0,17652,
#Deleted in new
chr6_GL000253v2_alt	2149769	2158404	chr6_GL000253v2_alt:2149769-2158404	3	-	2149769	2149769	789624	3	494,113,192,	0,7512,8443,
#Deleted in new
chr6_GL000253v2_alt	2174494	2174797	chr6_GL000253v2_alt:2174494-2174797	3	+	2174494	2174494	8553170	1	303,	0,
#Deleted in new
chr6_GL000253v2_alt	2177226	2186160	chr6_GL000253v2_alt:2177226-2186160	3	-	2177226	2177226	8553170	2	2852,1142,	0,7792,
#Deleted in new
chr6_GL000253v2_alt	2191216	2202433	chr6_GL000253v2_alt:2191216-2202433	0	+	2191216	2191216	8553170	7	151,127,103,229,148,100,194,	0,7713,7933,8227,9998,10405,11023,
#Deleted in new
chr6_GL000253v2_alt	2191269	2210394	chr6_GL000253v2_alt:2191269-2210394	3	+	2198971	2209534	0	20	98,173,56,127,103,229,148,100,187,247,96,152,166,111,245,128,219,235,150,1001,	0,3510,4597,7660,7880,8174,9945,10352,10970,11264,12036,12240,13474,14372,15589,15982,16347,17041,17856,18124,
#Deleted in new
chr6_GL000253v2_alt	2191536	2194949	chr6_GL000253v2_alt:2191536-2194949	0	+	2191536	2191536	8553170	2	76,170,	0,3243,
#Deleted in new
chr6_GL000253v2_alt	2193187	2201297	chr6_GL000253v2_alt:2193187-2201297	0	+	2198971	2201297	789624	5	38,127,103,229,83,	0,5742,5962,6256,8027,
#Deleted in new
chr6_GL000253v2_alt	2193332	2201240	chr6_GL000253v2_alt:2193332-2201240	0	+	2198971	2201240	789624	5	75,127,103,229,26,	0,5597,5817,6111,7882,
#Deleted in new
chr6_GL000253v2_alt	2194020	2210394	chr6_GL000253v2_alt:2194020-2210394	1	+	2198971	2209534	0	19	151,173,127,103,229,148,100,187,247,96,152,166,111,245,128,219,235,150,1001,	0,759,4909,5129,5423,7194,7601,8219,8513,9285,9489,10723,11621,12838,13231,13596,14290,15105,15373,
#Deleted in new
chr6_GL000253v2_alt	2194304	2210394	chr6_GL000253v2_alt:2194304-2210394	1	+	2198971	2209534	0	19	83,173,56,127,103,229,148,100,187,247,96,152,166,245,128,219,235,150,1001,	0,475,1562,4625,4845,5139,6910,7317,7935,8229,9001,9205,10439,12554,12947,13312,14006,14821,15089,
#Deleted in new
chr6_GL000253v2_alt	2194594	2199672	chr6_GL000253v2_alt:2194594-2199672	0	+	2198971	2199672	789624	5	358,56,127,103,229,	0,1272,4335,4555,4849,
#Deleted in new
chr6_GL000253v2_alt	2194699	2199254	chr6_GL000253v2_alt:2194699-2199254	0	+	2198971	2199254	789624	3	253,127,105,	0,4230,4450,
#Deleted in new
chr6_GL000253v2_alt	2194791	2210390	chr6_GL000253v2_alt:2194791-2210390	1	+	2198971	2209534	0	19	161,56,127,103,229,148,100,187,247,96,152,166,111,245,128,219,235,150,997,	0,1075,4138,4358,4652,6423,6830,7448,7742,8514,8718,9952,10850,12067,12460,12825,13519,14334,14602,
#Deleted in new
chr6_GL000253v2_alt	2194797	2210394	chr6_GL000253v2_alt:2194797-2210394	0	+	2194797	2194797	8553170	16	155,127,103,229,148,187,247,96,152,166,245,128,219,235,150,1001,	0,4132,4352,4646,6417,7442,7736,8508,8712,9946,12061,12454,12819,13513,14328,14596,
#Deleted in new
chr6_GL000253v2_alt	2194807	2210394	chr6_GL000253v2_alt:2194807-2210394	1	+	2198971	2209534	0	17	145,127,103,229,148,100,187,247,96,152,166,245,128,219,235,150,1001,	0,4122,4342,4636,6407,6814,7432,7726,8498,8702,9936,12051,12444,12809,13503,14318,14586,
#Deleted in new
chr6_GL000253v2_alt	2195221	2210390	chr6_GL000253v2_alt:2195221-2210390	1	+	2195461	2209534	0	17	252,127,103,229,148,100,187,247,96,152,166,245,128,219,235,150,997,	0,3708,3928,4222,5993,6400,7018,7312,8084,8288,9522,11637,12030,12395,13089,13904,14172,
#Deleted in new
chr6_GL000253v2_alt	2195467	2201684	chr6_GL000253v2_alt:2195467-2201684	0	+	2198971	2201684	789624	6	129,127,103,229,148,63,	0,3462,3682,3976,5747,6154,
#Deleted in new
chr6_GL000253v2_alt	2198630	2210394	chr6_GL000253v2_alt:2198630-2210394	1	+	2198971	2209534	0	16	426,103,229,148,100,187,247,96,152,166,245,128,219,235,150,1001,	0,519,813,2584,2991,3609,3903,4675,4879,6113,8228,8621,8986,9680,10495,10763,
#Deleted in new
chr6_GL000253v2_alt	2198929	2210390	chr6_GL000253v2_alt:2198929-2210390	1	+	2198971	2209534	789624	15	127,103,229,148,100,187,247,96,152,84,128,219,235,150,997,	0,220,514,2285,2692,3310,3604,4376,4580,5896,8322,8687,9381,10196,10464,
#Deleted in new
chr6_GL000253v2_alt	2198971	2202406	chr6_GL000253v2_alt:2198971-2202406	1	+	2198971	2202406	0	5	85,103,229,148,167,	0,178,472,2243,3268,
#Deleted in new
chr6_GL000253v2_alt	2201383	2202416	chr6_GL000253v2_alt:2201383-2202416	0	+	2201383	2201383	8553170	2	338,177,	0,856,
#Deleted in new
chr6_GL000253v2_alt	2201668	2208377	chr6_GL000253v2_alt:2201668-2208377	0	+	2201668	2208377	789624	11	53,187,247,96,152,84,111,135,128,219,67,	0,571,865,1637,1841,3157,3973,5300,5583,5948,6642,
#Deleted in new
chr6_GL000253v2_alt	2203592	2207284	chr6_GL000253v2_alt:2203592-2207284	0	+	2203592	2203592	8553170	3	69,166,33,	0,1151,3659,
#Deleted in new
chr6_GL000253v2_alt	2206858	2210394	chr6_GL000253v2_alt:2206858-2210394	0	+	2206858	2209534	789624	6	245,128,237,235,150,1001,	0,393,740,1452,2267,2535,
#Deleted in new
chr6_GL000253v2_alt	2207312	2209642	chr6_GL000253v2_alt:2207312-2209642	0	+	2207312	2207312	8553170	4	67,219,235,517,	0,304,998,1813,
#Deleted in new
chr6_GL000253v2_alt	2218419	2224342	chr6_GL000253v2_alt:2218419-2224342	3	+	2219272	2224219	0	14	220,140,105,132,97,89,112,69,84,133,131,48,79,296,	0,850,1251,1748,2481,2669,2974,3247,3500,3830,4144,4926,5125,5627,
#Deleted in new
chr6_GL000253v2_alt	2218456	2224342	chr6_GL000253v2_alt:2218456-2224342	1	+	2219272	2224219	0	14	158,140,105,132,97,89,112,69,84,133,131,48,79,296,	0,813,1214,1711,2444,2632,2937,3210,3463,3793,4107,4889,5088,5590,
#Deleted in new
chr6_GL000253v2_alt	2218458	2220870	chr6_GL000253v2_alt:2218458-2220870	0	+	2219272	2220870	789624	5	181,140,105,132,40,	0,811,1212,1709,2372,
#Deleted in new
chr6_GL000253v2_alt	2218477	2236697	chr6_GL000253v2_alt:2218477-2236697	0	+	2218477	2218477	8553170	41	162,140,105,132,97,89,112,69,84,445,48,79,1227,82,101,122,67,98,107,120,112,89,91,128,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,351,	0,792,1193,1690,2423,2611,2916,3189,3442,3772,4868,5067,5569,6914,7113,7504,7739,7910,8638,8865,9455,10587,11518,11849,12093,12428,12825,12990,13349,13685,13876,14210,14466,14658,14864,15113,16114,17034,17304,17640,17869,
#Deleted in new
chr6_GL000253v2_alt	2219677	2222629	chr6_GL000253v2_alt:2219677-2222629	0	+	2219677	2219677	8553170	8	98,132,97,89,112,69,463,66,	0,490,1223,1411,1716,1989,2242,2886,
#Deleted in new
chr6_GL000253v2_alt	2222186	2224342	chr6_GL000253v2_alt:2222186-2224342	0	+	2222186	2222186	8553170	3	508,278,296,	0,1159,1860,
#Deleted in new
chr6_GL000253v2_alt	2222458	2224342	chr6_GL000253v2_alt:2222458-2224342	0	+	2222458	2222458	8553170	4	236,48,79,296,	0,887,1086,1588,
#Deleted in new
chr6_GL000253v2_alt	2224440	2236697	chr6_GL000253v2_alt:2224440-2236697	1	+	2225072	2236448	789624	29	833,82,101,122,67,98,82,120,112,89,91,128,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,351,	0,951,1150,1541,1776,1947,2675,2902,3492,4624,5555,5886,6130,6465,6862,7027,7386,7722,7913,8247,8503,8695,8901,9150,10151,11071,11341,11677,11906,
#Deleted in new
chr6_GL000253v2_alt	2224440	2236694	chr6_GL000253v2_alt:2224440-2236694	3	+	2225072	2236448	789624	29	833,82,101,122,67,98,82,120,112,89,91,122,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,348,	0,951,1150,1541,1776,1947,2675,2902,3492,4624,5555,5892,6130,6465,6862,7027,7386,7722,7913,8247,8503,8695,8901,9150,10151,11071,11341,11677,11906,
#Deleted in new
chr6_GL000253v2_alt	2224487	2228037	chr6_GL000253v2_alt:2224487-2228037	0	+	2225072	2228037	789624	10	93,233,82,101,122,67,98,82,120,105,	0,553,904,1103,1494,1729,1900,2628,2855,3445,
#Deleted in new
chr6_GL000253v2_alt	2224501	2228044	chr6_GL000253v2_alt:2224501-2228044	2	+	2224501	2224501	8553170	9	79,82,101,122,67,98,82,120,112,	0,890,1089,1480,1715,1886,2614,2841,3431,
#Deleted in new
chr6_GL000253v2_alt	2224566	2236694	chr6_GL000253v2_alt:2224566-2236694	1	+	2224647	2236448	789624	30	139,233,82,101,122,67,98,82,120,112,89,91,128,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,348,	0,474,825,1024,1415,1650,1821,2549,2776,3366,4498,5429,5760,6004,6339,6736,6901,7260,7596,7787,8121,8377,8569,8775,9024,10025,10945,11215,11551,11780,
#Deleted in new
chr6_GL000253v2_alt	2224617	2225652	chr6_GL000253v2_alt:2224617-2225652	0	+	2225072	2225652	789624	4	88,228,82,62,	0,428,774,973,
#Deleted in new
chr6_GL000253v2_alt	2226663	2227999	chr6_GL000253v2_alt:2226663-2227999	0	+	2226663	2226663	8553170	3	534,120,67,	0,679,1269,
#Deleted in new
chr6_GL000253v2_alt	2229001	2236697	chr6_GL000253v2_alt:2229001-2236697	0	+	2229001	2229001	8553170	19	1085,128,104,82,77,76,103,71,126,173,69,79,128,153,207,112,176,129,351,	0,1325,1569,1904,2301,2466,2825,3161,3352,3618,3942,4134,4340,4589,5590,6510,6780,7116,7345,
#Deleted in new
chr6_GL000253v2_alt	2230063	2236697	chr6_GL000253v2_alt:2230063-2236697	0	+	2230063	2230063	8553170	18	23,128,104,82,77,76,103,126,105,69,79,128,153,207,112,176,129,351,	0,263,507,842,1239,1404,1763,2290,2624,2880,3072,3278,3527,4528,5448,5718,6054,6283,
#Deleted in new
chr6_GL000253v2_alt	2232367	2235912	chr6_GL000253v2_alt:2232367-2235912	0	+	2232367	2232367	8553170	8	112,105,69,79,128,153,211,131,	0,320,576,768,974,1223,2224,3414,
#Deleted in new
chr6_GL000253v2_alt	2232820	2233743	chr6_GL000253v2_alt:2232820-2233743	0	+	2232820	2232820	8553170	4	192,79,128,153,	0,315,521,770,
#Deleted in new
chr6_GL000253v2_alt	2233445	2236697	chr6_GL000253v2_alt:2233445-2236697	0	+	2233445	2233445	8553170	6	24,1208,112,176,129,351,	0,145,2066,2336,2672,2901,
#Deleted in new
chr6_GL000253v2_alt	2241590	2242413	chr6_GL000253v2_alt:2241590-2242413	3	-	2241725	2242334	789624	3	222,89,140,	0,354,683,
#Deleted in new
chr6_GL000253v2_alt	2241590	2242347	chr6_GL000253v2_alt:2241590-2242347	0	-	2241590	2241590	8553170	2	222,403,	0,354,
#Deleted in new
chr6_GL000253v2_alt	2242855	2242947	chr6_GL000253v2_alt:2242855-2242947	3	-	2242855	2242855	8553170	1	92,	0,
#Deleted in new
chr6_GL000253v2_alt	2293960	2300241	chr6_GL000253v2_alt:2293960-2300241	3	+	2294201	2298532	789624	3	302,1535,1904,	0,2524,4377,
#Deleted in new
chr6_GL000253v2_alt	2293960	2296637	chr6_GL000253v2_alt:2293960-2296637	0	+	2293960	2293960	8553170	2	444,153,	0,2524,
#Deleted in new
chr6_GL000253v2_alt	2294015	2298975	chr6_GL000253v2_alt:2294015-2298975	1	+	2294201	2298532	789624	6	247,328,127,53,487,638,	0,2469,2932,3284,3517,4322,
#Deleted in new
chr6_GL000253v2_alt	2320964	2345917	chr6_GL000253v2_alt:2320964-2345917	3	+	2320964	2320964	8553170	4	303,4599,386,731,	0,15052,21750,24222,
#Deleted in new
chr6_GL000253v2_alt	2340426	2345223	chr6_GL000253v2_alt:2340426-2345223	0	+	2340426	2340426	8553170	3	189,386,37,	0,2288,4760,
#Deleted in new
chr6_GL000253v2_alt	2363961	2370397	chr6_GL000253v2_alt:2363961-2370397	7	+	2363961	2363961	16724991	4	82,417,693,483,	0,650,2764,5953,
#Deleted in new
chr6_GL000253v2_alt	2364718	2370383	chr6_GL000253v2_alt:2364718-2370383	4	+	2364718	2364718	16724991	3	310,1201,469,	0,1499,5196,
#Deleted in new
chr6_GL000253v2_alt	2364841	2367298	chr6_GL000253v2_alt:2364841-2367298	5	+	2364841	2364841	16724991	2	187,573,	0,1884,
#Deleted in new
chr6_GL000253v2_alt	2393512	2393612	chr6_GL000253v2_alt:2393512-2393612	3	+	2393512	2393512	8553170	1	100,	0,
#Deleted in new
chr6_GL000253v2_alt	2421725	2423062	chr6_GL000253v2_alt:2421725-2423062	3	-	2421883	2423058	789624	2	1069,71,	0,1266,
#Deleted in new
chr6_GL000253v2_alt	2425263	2429331	chr6_GL000253v2_alt:2425263-2429331	0	+	2425263	2425263	8553170	2	142,3682,	0,386,
#Deleted in new
chr6_GL000253v2_alt	2425338	2427810	chr6_GL000253v2_alt:2425338-2427810	0	+	2425338	2425338	8553170	2	67,210,	0,2262,
#Deleted in new
chr6_GL000253v2_alt	2425344	2450563	chr6_GL000253v2_alt:2425344-2450563	1	+	2440156	2450457	789624	6	61,164,77,30,124,398,	0,10843,14748,23610,23836,24821,
#Deleted in new
chr6_GL000253v2_alt	2425344	2450563	chr6_GL000253v2_alt:2425344-2450563	0	+	2425344	2425344	8553170	2	61,398,	0,24821,
#Deleted in new
chr6_GL000253v2_alt	2425649	2430956	chr6_GL000253v2_alt:2425649-2430956	3	-	2426535	2430929	789624	2	2391,112,	0,5195,
#Deleted in new
chr6_GL000253v2_alt	2448058	2449875	chr6_GL000253v2_alt:2448058-2449875	3	-	2448475	2449551	789624	2	773,379,	0,1438,
#Deleted in new
chr6_GL000253v2_alt	2448883	2450563	chr6_GL000253v2_alt:2448883-2450563	0	+	2448883	2448883	8553170	2	101,398,	0,1282,
#Deleted in new
chr6_GL000253v2_alt	2448944	2450562	chr6_GL000253v2_alt:2448944-2450562	3	+	2448944	2450457	789624	3	40,124,397,	0,236,1221,
#Deleted in new
chr6_GL000253v2_alt	2451243	2451430	chr6_GL000253v2_alt:2451243-2451430	7	+	2451243	2451243	16724991	1	187,	0,
#Deleted in new
chr6_GL000253v2_alt	2452953	2468748	chr6_GL000253v2_alt:2452953-2468748	1	-	2453106	2467569	789624	18	278,172,152,102,189,137,46,113,107,111,150,111,136,164,304,214,67,47,	0,524,823,2248,2446,2727,3009,3257,5958,6171,7619,8008,8278,8512,12059,14308,14600,15748,
#Deleted in new
chr6_GL000253v2_alt	2452953	2455751	chr6_GL000253v2_alt:2452953-2455751	2	-	2453106	2455751	789624	6	278,130,152,102,189,71,	0,524,823,2248,2446,2727,
#Deleted in new
chr6_GL000253v2_alt	2452953	2468324	chr6_GL000253v2_alt:2452953-2468324	1	-	2453106	2467569	789624	18	278,172,152,102,189,137,46,113,107,111,150,111,136,164,304,214,67,405,	0,524,823,2248,2446,2727,3009,3257,5958,6171,7619,8008,8278,8512,12059,14308,14600,14966,
#Deleted in new
chr6_GL000253v2_alt	2452953	2468736	chr6_GL000253v2_alt:2452953-2468736	1	-	2453106	2467569	789624	16	278,172,152,102,189,137,107,111,150,111,136,164,304,214,133,35,	0,524,823,2248,2446,2727,5958,6171,7619,8008,8278,8512,12059,14308,14600,15748,
#Deleted in new
chr6_GL000253v2_alt	2452954	2468324	chr6_GL000253v2_alt:2452954-2468324	1	-	2453106	2468135	789624	19	277,172,152,102,189,137,46,113,107,111,150,111,136,164,304,214,49,15,405,	0,523,822,2247,2445,2726,3008,3256,5957,6170,7618,8007,8277,8511,12058,14307,14599,14651,14965,
#Deleted in new
chr6_GL000253v2_alt	2453574	2455817	chr6_GL000253v2_alt:2453574-2455817	0	-	2453574	2453574	8553170	3	75,387,115,	0,1627,2128,
#Deleted in new
chr6_GL000253v2_alt	2453610	2455630	chr6_GL000253v2_alt:2453610-2455630	0	-	2453610	2453610	8553170	4	39,152,160,231,	0,166,1533,1789,
#Deleted in new
chr6_GL000253v2_alt	2459666	2468726	chr6_GL000253v2_alt:2459666-2468726	0	-	2459666	2459666	8553170	3	509,67,25,	0,7887,9035,
#Deleted in new
chr6_GL000253v2_alt	2460611	2467621	chr6_GL000253v2_alt:2460611-2467621	0	-	2460611	2467569	789624	7	111,111,136,164,304,106,68,	0,350,620,854,4401,6650,6942,
#Deleted in new
chr6_GL000253v2_alt	2461373	2465268	chr6_GL000253v2_alt:2461373-2465268	0	-	2461373	2461373	8553170	2	256,256,	0,3639,
#Deleted in new
chr6_GL000253v2_alt	2461598	2468617	chr6_GL000253v2_alt:2461598-2468617	0	-	2461598	2467569	789624	5	31,304,214,67,84,	0,3414,5663,5955,6935,
#Deleted in new
chr6_GL000253v2_alt	2465088	2468722	chr6_GL000253v2_alt:2465088-2468722	0	-	2465088	2467569	789624	5	228,214,67,116,21,	0,2173,2465,2831,3613,
#Deleted in new
chr6_GL000253v2_alt	2465110	2468604	chr6_GL000253v2_alt:2465110-2468604	0	-	2465110	2467569	789624	4	206,359,116,59,	0,2151,2809,3435,
#Deleted in new
chr6_GL000253v2_alt	2465190	2468323	chr6_GL000253v2_alt:2465190-2468323	0	-	2465190	2467569	789624	4	126,214,67,431,	0,2071,2363,2702,
#Deleted in new
chr6_GL000253v2_alt	2465244	2468740	chr6_GL000253v2_alt:2465244-2468740	0	-	2465244	2467569	789624	3	72,359,39,	0,2017,3457,
#Deleted in new
chr6_GL000253v2_alt	2466762	2467620	chr6_GL000253v2_alt:2466762-2467620	0	-	2466762	2466762	8553170	2	713,67,	0,791,
#Deleted in new
chr6_GL000253v2_alt	2467289	2468307	chr6_GL000253v2_alt:2467289-2468307	0	-	2467289	2467289	8553170	3	186,133,388,	0,264,630,
#Deleted in new
chr6_GL000253v2_alt	2469086	2474716	chr6_GL000253v2_alt:2469086-2474716	1	+	2470004	2473217	789624	4	171,811,559,1740,	0,345,2860,3890,
#Deleted in new
chr6_GL000253v2_alt	2469128	2474716	chr6_GL000253v2_alt:2469128-2474716	3	+	2470004	2473217	789624	4	129,565,559,1740,	0,549,2818,3848,
#Deleted in new
chr6_GL000253v2_alt	2471983	2473507	chr6_GL000253v2_alt:2471983-2473507	0	+	2471983	2471983	8553170	3	94,255,531,	0,267,993,
#Deleted in new
chr6_GL000253v2_alt	2474837	2476779	chr6_GL000253v2_alt:2474837-2476779	1	-	2475101	2476678	789624	4	531,159,131,342,	0,793,1236,1600,
#Deleted in new
chr6_GL000253v2_alt	2474837	2481213	chr6_GL000253v2_alt:2474837-2481213	3	-	2475101	2481140	789624	5	531,159,131,121,478,	0,793,1236,1600,5898,
#Deleted in new
chr6_GL000253v2_alt	2474837	2475795	chr6_GL000253v2_alt:2474837-2475795	0	-	2474837	2474837	8553170	2	531,165,	0,793,
#Deleted in new
chr6_GL000253v2_alt	2476202	2481178	chr6_GL000253v2_alt:2476202-2481178	0	-	2476202	2476202	8553170	2	356,443,	0,4533,
#Deleted in new
chr6_GL000253v2_alt	2481081	2483105	chr6_GL000253v2_alt:2481081-2483105	3	+	2481081	2483105	789624	5	30,30,24,8,16,	0,161,450,1674,2008,
#Deleted in new
chr6_GL000253v2_alt	2484254	2488424	chr6_GL000253v2_alt:2484254-2488424	3	-	2484254	2484254	789624	3	299,33,261,	0,503,3909,
#Deleted in new
chr6_GL000253v2_alt	2508304	2508427	chr6_GL000253v2_alt:2508304-2508427	3	+	2508304	2508304	8553170	1	123,	0,
#Deleted in new
chr6_GL000253v2_alt	2508682	2508726	chr6_GL000253v2_alt:2508682-2508726	0	+	2508682	2508682	8553170	1	44,	0,
#Deleted in new
chr6_GL000253v2_alt	2510713	2511187	chr6_GL000253v2_alt:2510713-2511187	3	-	2510713	2510713	8553170	1	474,	0,
#Deleted in new
chr6_GL000253v2_alt	2577800	2581128	chr6_GL000253v2_alt:2577800-2581128	1	-	2578121	2581113	789624	7	423,48,149,276,276,270,88,	0,587,1185,1455,2318,2840,3240,
#Deleted in new
chr6_GL000253v2_alt	2577800	2581135	chr6_GL000253v2_alt:2577800-2581135	1	-	2578218	2581113	789624	6	423,120,276,276,270,95,	0,1214,1455,2318,2840,3240,
#Deleted in new
chr6_GL000253v2_alt	2577800	2581172	chr6_GL000253v2_alt:2577800-2581172	3	-	2578218	2581113	789624	8	423,48,33,120,276,276,270,132,	0,587,742,1214,1455,2318,2840,3240,
#Deleted in new
chr6_GL000253v2_alt	2577800	2581128	chr6_GL000253v2_alt:2577800-2581128	1	-	2578218	2581113	789624	8	423,48,51,120,276,276,270,88,	0,587,742,1214,1455,2318,2840,3240,
#Deleted in new
chr6_GL000253v2_alt	2577800	2579468	chr6_GL000253v2_alt:2577800-2579468	0	-	2577800	2577800	8553170	4	423,48,592,213,	0,587,742,1455,
#Deleted in new
chr6_GL000253v2_alt	2577800	2581092	chr6_GL000253v2_alt:2577800-2581092	0	-	2577800	2577800	8553170	6	423,48,33,120,276,974,	0,587,742,1214,1455,2318,
#Deleted in new
chr6_GL000253v2_alt	2577800	2578716	chr6_GL000253v2_alt:2577800-2578716	0	-	2577800	2577800	8553170	2	423,329,	0,587,
#Deleted in new
chr6_GL000253v2_alt	2577800	2581147	chr6_GL000253v2_alt:2577800-2581147	0	-	2580324	2581113	789624	8	423,48,33,120,276,259,270,107,	0,587,742,1214,1455,2318,2840,3240,
#Deleted in new
chr6_GL000253v2_alt	2578388	2581113	chr6_GL000253v2_alt:2578388-2581113	1	-	2578388	2581113	789624	6	49,31,276,276,272,71,	0,156,867,1730,2252,2654,
#Deleted in new
chr6_GL000253v2_alt	2578388	2581113	chr6_GL000253v2_alt:2578388-2581113	1	-	2578388	2580374	789624	8	47,33,120,276,276,100,51,73,	0,154,626,867,1730,2252,2471,2652,
#Deleted in new
chr6_GL000253v2_alt	2578540	2664016	chr6_GL000253v2_alt:2578540-2664016	3	-	2578540	2664016	789624	3	35,117,88,	0,85178,85388,
#Deleted in new
chr6_GL000253v2_alt	2579255	2581115	chr6_GL000253v2_alt:2579255-2581115	0	-	2579255	2579255	8553170	5	276,69,276,270,75,	0,422,863,1385,1785,
#Deleted in new
chr6_GL000253v2_alt	2579259	2581111	chr6_GL000253v2_alt:2579259-2581111	0	-	2579259	2581111	789624	5	118,47,276,270,71,	0,225,859,1381,1781,
#Deleted in new
chr6_GL000253v2_alt	2579266	2581172	chr6_GL000253v2_alt:2579266-2581172	0	-	2579266	2579266	8553170	3	265,276,532,	0,852,1374,
#Deleted in new
chr6_GL000253v2_alt	2580144	2581132	chr6_GL000253v2_alt:2580144-2581132	0	-	2580144	2580144	8553170	2	766,92,	0,896,
#Deleted in new
chr6_GL000253v2_alt	2584582	2587755	chr6_GL000253v2_alt:2584582-2587755	7	+	2584582	2584582	16724991	1	3173,	0,
#Deleted in new
chr6_GL000253v2_alt	2589317	2590520	chr6_GL000253v2_alt:2589317-2590520	7	+	2589317	2589317	16724991	1	1203,	0,
#Deleted in new
chr6_GL000253v2_alt	2596506	2597958	chr6_GL000253v2_alt:2596506-2597958	7	-	2596506	2596506	16724991	1	1452,	0,
#Deleted in new
chr6_GL000253v2_alt	2616798	2617532	chr6_GL000253v2_alt:2616798-2617532	7	-	2616798	2616798	16724991	2	233,73,	0,661,
#Deleted in new
chr6_GL000253v2_alt	2662483	2665857	chr6_GL000253v2_alt:2662483-2665857	1	-	2663094	2665770	789624	8	425,48,33,117,276,276,270,160,	0,607,761,1235,1445,2296,2815,3214,
#Deleted in new
chr6_GL000253v2_alt	2662483	2665016	chr6_GL000253v2_alt:2662483-2665016	0	-	2663094	2665016	789624	6	425,48,51,117,276,237,	0,607,761,1235,1445,2296,
#Deleted in new
chr6_GL000253v2_alt	2662483	2663688	chr6_GL000253v2_alt:2662483-2663688	0	-	2662483	2662483	8553170	3	425,48,444,	0,607,761,
#Deleted in new
chr6_GL000253v2_alt	2662483	2663418	chr6_GL000253v2_alt:2662483-2663418	0	-	2662483	2662483	8553170	2	425,328,	0,607,
#Deleted in new
chr6_GL000253v2_alt	2663112	2664016	chr6_GL000253v2_alt:2663112-2664016	1	-	2663112	2664016	789624	3	26,33,88,	0,132,816,
#Deleted in new
chr6_GL000253v2_alt	2663733	2664414	chr6_GL000253v2_alt:2663733-2664414	0	-	2663733	2663733	8553170	2	102,486,	0,195,
#Deleted in new
chr6_GL000253v2_alt	2663793	2665772	chr6_GL000253v2_alt:2663793-2665772	0	-	2664362	2665770	789624	6	42,276,69,276,270,75,	0,135,556,986,1505,1904,
#Deleted in new
chr6_GL000253v2_alt	2664002	2665791	chr6_GL000253v2_alt:2664002-2665791	0	-	2664002	2664002	8553170	3	202,789,94,	0,777,1695,
#Deleted in new
chr6_GL000253v2_alt	2664118	2665756	chr6_GL000253v2_alt:2664118-2665756	0	-	2664118	2665674	789624	3	86,276,458,	0,661,1180,
#Deleted in new
chr6_GL000253v2_alt	2674959	2675506	chr6_GL000253v2_alt:2674959-2675506	7	-	2674959	2674959	16724991	1	547,	0,
#Deleted in new
chr6_GL000253v2_alt	2678742	2678849	chr6_GL000253v2_alt:2678742-2678849	3	+	2678742	2678742	8553170	1	107,	0,
#Deleted in new
chr6_GL000253v2_alt	2686020	2686622	chr6_GL000253v2_alt:2686020-2686622	7	+	2686020	2686020	16724991	1	602,	0,
#Deleted in new
chr6_GL000253v2_alt	2689017	2689446	chr6_GL000253v2_alt:2689017-2689446	7	+	2689017	2689017	16724991	1	429,	0,
#Deleted in new
chr6_GL000253v2_alt	2690680	2690895	chr6_GL000253v2_alt:2690680-2690895	7	-	2690680	2690680	16724991	2	5,48,	0,167,
#Deleted in new
chr6_GL000253v2_alt	2708376	2723902	chr6_GL000253v2_alt:2708376-2723902	3	+	2719299	2723726	789624	6	980,255,116,279,138,304,	0,10751,11452,12155,12533,15222,
#Deleted in new
chr6_GL000253v2_alt	2709239	2720810	chr6_GL000253v2_alt:2709239-2720810	0	+	2709239	2709239	8553170	4	117,255,288,279,	0,9888,10417,11292,
#Deleted in new
chr6_GL000253v2_alt	2709341	2723902	chr6_GL000253v2_alt:2709341-2723902	1	+	2712223	2723726	0	8	15,200,258,255,288,279,138,304,	0,1406,2694,9786,10315,11190,11568,14257,
#Deleted in new
chr6_GL000253v2_alt	2710742	2710841	chr6_GL000253v2_alt:2710742-2710841	3	-	2710742	2710742	8553170	1	99,	0,
#Deleted in new
chr6_GL000253v2_alt	2712129	2724826	chr6_GL000253v2_alt:2712129-2724826	1	+	2712223	2723726	789624	6	164,255,159,279,138,1228,	0,6998,7656,8402,8780,11469,
#Deleted in new
chr6_GL000253v2_alt	2712157	2723900	chr6_GL000253v2_alt:2712157-2723900	1	+	2712196	2720991	789624	8	42,91,255,288,279,59,77,302,	0,45,6970,7499,8374,8752,8813,11441,
#Deleted in new
chr6_GL000253v2_alt	2712157	2723900	chr6_GL000253v2_alt:2712157-2723900	1	+	2712196	2723699	789624	7	42,91,255,288,279,138,302,	0,45,6970,7499,8374,8752,11441,
#Deleted in new
chr6_GL000253v2_alt	2712262	2723902	chr6_GL000253v2_alt:2712262-2723902	0	+	2712262	2723726	789624	5	31,255,279,138,304,	0,6865,8269,8647,11336,
#Deleted in new
chr6_GL000253v2_alt	2719447	2721047	chr6_GL000253v2_alt:2719447-2721047	0	+	2719447	2719447	8553170	3	497,279,138,	0,1084,1462,
#Deleted in new
chr6_GL000253v2_alt	2749705	2755003	chr6_GL000253v2_alt:2749705-2755003	3	+	2749705	2749705	8553170	2	645,1495,	0,3803,
#Deleted in new
chr6_GL000253v2_alt	2810694	2816200	chr6_GL000253v2_alt:2810694-2816200	3	+	2810694	2814987	789624	5	255,288,279,132,1341,	0,526,1405,1783,4165,
#Deleted in new
chr6_GL000253v2_alt	2810694	2816200	chr6_GL000253v2_alt:2810694-2816200	0	+	2810694	2814987	789624	5	255,159,279,132,1341,	0,655,1405,1783,4165,
#Deleted in new
chr6_GL000253v2_alt	2811012	2812609	chr6_GL000253v2_alt:2811012-2812609	0	+	2811012	2811012	8553170	3	496,279,132,	0,1087,1465,
#Deleted in new
chr6_GL000253v2_alt	2824561	2825373	chr6_GL000253v2_alt:2824561-2825373	7	-	2824561	2824561	16724991	2	171,327,	0,485,
#Deleted in new
chr6_GL000253v2_alt	2833186	2833766	chr6_GL000253v2_alt:2833186-2833766	7	+	2833186	2833186	16724991	1	580,	0,
#Deleted in new
chr6_GL000253v2_alt	2833789	2835305	chr6_GL000253v2_alt:2833789-2835305	3	+	2834087	2835008	789624	2	469,486,	0,1030,
#Deleted in new
chr6_GL000253v2_alt	2835291	2847501	chr6_GL000253v2_alt:2835291-2847501	1	-	2835506	2845601	0	11	232,148,145,110,132,119,184,93,128,213,499,	0,559,833,1076,2560,5146,6279,8542,8926,10099,11711,
#Deleted in new
chr6_GL000253v2_alt	2835291	2851631	chr6_GL000253v2_alt:2835291-2851631	3	-	2835506	2845601	0	13	232,148,145,110,132,119,184,93,128,343,199,101,105,	0,559,833,1076,2560,5146,6279,8542,8926,10099,11711,15870,16235,
#Deleted in new
chr6_GL000253v2_alt	2835291	2845605	chr6_GL000253v2_alt:2835291-2845605	1	-	2835865	2845601	789624	10	232,171,145,110,132,119,184,93,128,215,	0,559,833,1076,2560,5146,6279,8542,8926,10099,
#Deleted in new
chr6_GL000253v2_alt	2835291	2847501	chr6_GL000253v2_alt:2835291-2847501	1	-	2835506	2845601	0	11	232,148,145,110,132,119,184,93,128,343,499,	0,559,833,1076,2560,5146,6279,8542,8926,10099,11711,
#Deleted in new
chr6_GL000253v2_alt	2835291	2836816	chr6_GL000253v2_alt:2835291-2836816	0	-	2835291	2835291	8553170	4	232,148,145,449,	0,559,833,1076,
#Deleted in new
chr6_GL000253v2_alt	2835291	2847070	chr6_GL000253v2_alt:2835291-2847070	0	-	2835291	2835291	8553170	10	232,148,145,110,2705,184,93,128,213,68,	0,559,833,1076,2560,6279,8542,8926,10099,11711,
#Deleted in new
chr6_GL000253v2_alt	2835291	2840546	chr6_GL000253v2_alt:2835291-2840546	0	-	2836177	2840546	789624	6	232,148,126,110,132,109,	0,559,833,1076,2560,5146,
#Deleted in new
chr6_GL000253v2_alt	2835315	2836007	chr6_GL000253v2_alt:2835315-2836007	0	-	2835315	2835315	8553170	2	506,111,	0,581,
#Deleted in new
chr6_GL000253v2_alt	2835850	2839582	chr6_GL000253v2_alt:2835850-2839582	0	-	2835850	2839582	789624	5	148,145,110,132,26,	0,274,517,2001,3706,
#Deleted in new
chr6_GL000253v2_alt	2836187	2836743	chr6_GL000253v2_alt:2836187-2836743	0	-	2836187	2836187	8553170	2	63,376,	0,180,
#Deleted in new
chr6_GL000253v2_alt	2836345	2847454	chr6_GL000253v2_alt:2836345-2847454	0	-	2836345	2836345	8553170	6	132,132,119,184,213,452,	0,1506,4092,5225,9045,10657,
#Deleted in new
chr6_GL000253v2_alt	2836373	2847034	chr6_GL000253v2_alt:2836373-2847034	0	-	2836373	2845588	789624	6	104,132,119,184,343,32,	0,1478,4064,5197,9017,10629,
#Deleted in new
chr6_GL000253v2_alt	2837484	2847054	chr6_GL000253v2_alt:2837484-2847054	0	-	2837484	2837484	8553170	5	3072,184,93,128,1664,	0,4086,6349,6733,7906,
#Deleted in new
chr6_GL000253v2_alt	2837851	2846584	chr6_GL000253v2_alt:2837851-2846584	0	-	2837851	2845601	789624	7	132,119,184,93,128,213,136,	0,2586,3719,5982,6366,7539,8597,
#Deleted in new
chr6_GL000253v2_alt	2840458	2847071	chr6_GL000253v2_alt:2840458-2847071	0	-	2840458	2845601	789624	6	98,184,93,128,245,69,	0,1112,3375,3759,4932,6544,
#Deleted in new
chr6_GL000253v2_alt	2840465	2846537	chr6_GL000253v2_alt:2840465-2846537	0	-	2840465	2845601	789624	6	91,184,93,128,343,89,	0,1105,3368,3752,4925,5983,
#Deleted in new
chr6_GL000253v2_alt	2840477	2846990	chr6_GL000253v2_alt:2840477-2846990	0	-	2840477	2845601	789624	6	79,184,93,128,343,105,	0,1093,3356,3740,4913,6408,
#Deleted in new
chr6_GL000253v2_alt	2841444	2841520	chr6_GL000253v2_alt:2841444-2841520	3	-	2841444	2841444	789624	1	76,	0,
#Deleted in new
chr6_GL000253v2_alt	2841679	2847042	chr6_GL000253v2_alt:2841679-2847042	0	-	2841679	2845601	789624	5	75,177,128,213,40,	0,2154,2538,3711,5323,
#Deleted in new
chr6_GL000253v2_alt	2841693	2846782	chr6_GL000253v2_alt:2841693-2846782	0	-	2841693	2846753	789624	5	61,93,128,213,96,	0,2140,2524,3697,4993,
#Deleted in new
chr6_GL000253v2_alt	2843889	2847039	chr6_GL000253v2_alt:2843889-2847039	0	-	2843889	2845601	789624	5	37,128,343,175,37,	0,328,1501,2316,3113,
#Deleted in new
chr6_GL000253v2_alt	2843901	2847044	chr6_GL000253v2_alt:2843901-2847044	0	-	2843901	2846248	789624	5	25,128,213,175,42,	0,316,1489,2304,3101,
#Deleted in new
chr6_GL000253v2_alt	2843952	2847056	chr6_GL000253v2_alt:2843952-2847056	0	-	2843952	2845601	789624	4	58,128,343,54,	0,265,1438,3050,
#Deleted in new
chr6_GL000253v2_alt	2844269	2846926	chr6_GL000253v2_alt:2844269-2846926	0	-	2844269	2845601	789624	3	76,343,240,	0,1121,2417,
#Deleted in new
chr6_GL000253v2_alt	2846153	2846231	chr6_GL000253v2_alt:2846153-2846231	3	-	2846153	2846153	789624	1	78,	0,
#Deleted in new
chr6_GL000253v2_alt	2847356	2848180	chr6_GL000253v2_alt:2847356-2848180	3	+	2847356	2847356	789624	2	93,423,	0,401,
#Deleted in new
chr6_GL000253v2_alt	2847425	2848191	chr6_GL000253v2_alt:2847425-2848191	0	+	2847425	2847425	8553170	2	24,430,	0,336,
#Deleted in new
chr6_GL000253v2_alt	2849514	2851686	chr6_GL000253v2_alt:2849514-2851686	3	-	2850460	2851608	789624	3	1078,23,160,	0,1725,2012,
#Deleted in new
chr6_GL000253v2_alt	2849514	2851656	chr6_GL000253v2_alt:2849514-2851656	1	-	2850460	2851608	789624	3	1120,101,130,	0,1647,2012,
#Deleted in new
chr6_GL000253v2_alt	2850336	2851804	chr6_GL000253v2_alt:2850336-2851804	0	-	2850336	2850336	8553170	3	298,161,124,	0,765,1344,
#Deleted in new
chr6_GL000253v2_alt	2850469	2851897	chr6_GL000253v2_alt:2850469-2851897	0	-	2850469	2850469	8553170	3	165,101,217,	0,692,1211,
#Deleted in new
chr6_GL000253v2_alt	2851918	2863876	chr6_GL000253v2_alt:2851918-2863876	0	+	2853222	2863658	789624	4	104,277,222,808,	0,1292,10756,11150,
#Deleted in new
chr6_GL000253v2_alt	2852628	2863876	chr6_GL000253v2_alt:2852628-2863876	3	+	2852742	2863658	789624	4	171,277,222,808,	0,582,10046,10440,
#Deleted in new
chr6_GL000253v2_alt	2852660	2863876	chr6_GL000253v2_alt:2852660-2863876	1	+	2852742	2863658	789624	4	139,277,177,808,	0,550,10014,10408,
#Deleted in new
chr6_GL000253v2_alt	2852687	2862752	chr6_GL000253v2_alt:2852687-2862752	0	+	2852687	2852687	8553170	4	112,277,87,78,	0,523,9057,9987,
#Deleted in new
chr6_GL000253v2_alt	2852708	2863006	chr6_GL000253v2_alt:2852708-2863006	0	+	2852708	2852708	8553170	3	91,277,332,	0,502,9966,
#Deleted in new
chr6_GL000253v2_alt	2877094	2879365	chr6_GL000253v2_alt:2877094-2879365	3	+	2877783	2878734	0	4	249,108,106,1044,	0,680,874,1227,
#Deleted in new
chr6_GL000253v2_alt	2877310	2879365	chr6_GL000253v2_alt:2877310-2879365	0	+	2877310	2877310	8553170	3	33,300,1044,	0,464,1011,
#Deleted in new
chr6_GL000253v2_alt	2877323	2879365	chr6_GL000253v2_alt:2877323-2879365	1	+	2877783	2878734	0	4	164,108,106,1044,	0,451,645,998,
#Deleted in new
chr6_GL000253v2_alt	2877334	2879365	chr6_GL000253v2_alt:2877334-2879365	0	+	2877334	2877334	8553170	3	153,300,1044,	0,440,987,
#Deleted in new
chr6_GL000253v2_alt	2880607	2883377	chr6_GL000253v2_alt:2880607-2883377	3	+	2880782	2882578	0	4	361,46,48,1221,	0,967,1200,1549,
#Deleted in new
chr6_GL000253v2_alt	2885595	2887466	chr6_GL000253v2_alt:2885595-2887466	3	-	2885749	2887458	0	4	609,72,46,170,	0,1004,1259,1701,
#Deleted in new
chr6_GL000253v2_alt	2885595	2887468	chr6_GL000253v2_alt:2885595-2887468	0	-	2885595	2885595	8553170	3	609,72,172,	0,1004,1701,
#Deleted in new
chr6_GL000253v2_alt	2885595	2887563	chr6_GL000253v2_alt:2885595-2887563	0	-	2885595	2885595	8553170	3	609,72,27,	0,1004,1941,
#Deleted in new
chr6_GL000253v2_alt	2891164	2893950	chr6_GL000253v2_alt:2891164-2893950	3	+	2892340	2893717	789624	4	192,119,23,392,	0,1076,1820,2394,
#Deleted in new
chr6_GL000253v2_alt	2891219	2893950	chr6_GL000253v2_alt:2891219-2893950	1	+	2892340	2893717	789624	5	137,119,93,23,392,	0,1021,1462,1765,2339,
#Deleted in new
chr6_GL000253v2_alt	2891234	2893950	chr6_GL000253v2_alt:2891234-2893950	0	+	2891234	2891234	8553170	2	122,1710,	0,1006,
#Deleted in new
chr6_GL000253v2_alt	2891257	2893950	chr6_GL000253v2_alt:2891257-2893950	1	+	2892340	2893626	789624	3	99,119,347,	0,983,2346,
#Deleted in new
chr6_GL000253v2_alt	2891257	2893950	chr6_GL000253v2_alt:2891257-2893950	1	+	2892340	2893626	789624	3	99,119,392,	0,983,2301,
#Deleted in new
chr6_GL000253v2_alt	2891260	2893950	chr6_GL000253v2_alt:2891260-2893950	1	+	2892340	2893717	789624	4	96,119,23,347,	0,980,1724,2343,
#Deleted in new
chr6_GL000253v2_alt	2891275	2893950	chr6_GL000253v2_alt:2891275-2893950	0	+	2891275	2891275	8553170	3	81,123,1359,	0,965,1316,
#Deleted in new
chr6_GL000253v2_alt	2891739	2893950	chr6_GL000253v2_alt:2891739-2893950	1	+	2892340	2893626	789624	4	109,119,93,413,	0,501,942,1798,
#Deleted in new
chr6_GL000253v2_alt	2891888	2893950	chr6_GL000253v2_alt:2891888-2893950	1	+	2892340	2893626	789624	3	92,119,392,	0,352,1670,
#Deleted in new
chr6_GL000253v2_alt	2891935	2892771	chr6_GL000253v2_alt:2891935-2892771	0	+	2892340	2892771	789624	3	45,119,90,	0,305,746,
#Deleted in new
chr6_GL000253v2_alt	2892049	2893950	chr6_GL000253v2_alt:2892049-2893950	1	+	2892340	2893626	789624	3	108,119,392,	0,191,1509,
#Deleted in new
chr6_GL000253v2_alt	2892062	2893950	chr6_GL000253v2_alt:2892062-2893950	1	+	2892340	2893626	789624	2	297,392,	0,1496,
#Deleted in new
chr6_GL000253v2_alt	2892072	2893950	chr6_GL000253v2_alt:2892072-2893950	1	+	2892340	2893717	789624	5	85,119,93,23,392,	0,168,609,912,1486,
#Deleted in new
chr6_GL000253v2_alt	2892106	2893950	chr6_GL000253v2_alt:2892106-2893950	1	+	2892340	2893717	789624	3	253,23,392,	0,878,1452,
#Deleted in new
chr6_GL000253v2_alt	2892120	2893950	chr6_GL000253v2_alt:2892120-2893950	1	+	2892340	2893717	789624	4	37,119,23,392,	0,120,864,1438,
#Deleted in new
chr6_GL000253v2_alt	2892126	2892882	chr6_GL000253v2_alt:2892126-2892882	0	+	2892340	2892882	789624	4	21,119,93,26,	0,114,555,730,
#Deleted in new
chr6_GL000253v2_alt	2892137	2893950	chr6_GL000253v2_alt:2892137-2893950	1	+	2892340	2893626	789624	4	20,119,93,392,	0,103,544,1421,
#Deleted in new
chr6_GL000253v2_alt	2892157	2893950	chr6_GL000253v2_alt:2892157-2893950	1	+	2892340	2893717	789624	4	202,93,23,347,	0,524,827,1446,
#Deleted in new
chr6_GL000253v2_alt	2892240	2893950	chr6_GL000253v2_alt:2892240-2893950	1	+	2892340	2893717	789624	4	119,93,23,413,	0,441,744,1297,
#Deleted in new
chr6_GL000253v2_alt	2892240	2893950	chr6_GL000253v2_alt:2892240-2893950	1	+	2892340	2893626	789624	2	119,413,	0,1297,
#Deleted in new
chr6_GL000253v2_alt	2892240	2893950	chr6_GL000253v2_alt:2892240-2893950	1	+	2892340	2893717	789624	3	119,23,413,	0,744,1297,
#Deleted in new
chr6_GL000253v2_alt	2892295	2893950	chr6_GL000253v2_alt:2892295-2893950	0	+	2892295	2892295	8553170	3	64,151,392,	0,561,1263,
#Deleted in new
chr6_GL000253v2_alt	2892344	2893950	chr6_GL000253v2_alt:2892344-2893950	0	+	2892344	2893626	789624	3	15,93,347,	0,337,1259,
#Deleted in new
chr6_GL000253v2_alt	2893935	2898026	chr6_GL000253v2_alt:2893935-2898026	1	-	2894107	2897762	0	4	282,108,345,307,	0,631,887,3784,
#Deleted in new
chr6_GL000253v2_alt	2893935	2898026	chr6_GL000253v2_alt:2893935-2898026	1	-	2894234	2897762	0	4	337,108,345,307,	0,631,887,3784,
#Deleted in new
chr6_GL000253v2_alt	2893935	2897853	chr6_GL000253v2_alt:2893935-2897853	0	-	2893935	2893935	8553170	4	337,108,118,22,	0,631,887,3896,
#Deleted in new
chr6_GL000253v2_alt	2893935	2898000	chr6_GL000253v2_alt:2893935-2898000	0	-	2893935	2893935	8553170	4	337,108,345,103,	0,631,887,3962,
#Deleted in new
chr6_GL000253v2_alt	2894314	2898026	chr6_GL000253v2_alt:2894314-2898026	1	-	2894352	2897762	0	4	115,108,345,307,	0,252,508,3405,
#Deleted in new
chr6_GL000253v2_alt	2894337	2897790	chr6_GL000253v2_alt:2894337-2897790	3	-	2894352	2897762	0	5	92,108,118,152,71,	0,229,485,678,3382,
#Deleted in new
chr6_GL000253v2_alt	2894337	2897790	chr6_GL000253v2_alt:2894337-2897790	0	-	2894659	2897762	789624	4	92,108,290,71,	0,229,540,3382,
#Deleted in new
chr6_GL000253v2_alt	2925760	2942812	chr6_GL000253v2_alt:2925760-2942812	3	+	2927827	2942627	789624	31	139,175,178,100,73,144,152,80,143,91,217,475,191,298,211,1854,269,131,130,86,225,141,72,168,83,211,99,213,95,91,326,	0,2004,3012,3541,3730,4451,4740,5072,5300,6052,6262,7045,8424,8828,9871,10419,12659,13139,13516,13752,14033,14412,14674,14862,15247,15489,15790,16013,16322,16514,16726,
#Deleted in new
chr6_GL000253v2_alt	2925764	2931903	chr6_GL000253v2_alt:2925764-2931903	0	+	2925764	2925764	8553170	8	135,100,73,144,152,80,143,91,	0,3537,3726,4447,4736,5068,5296,6048,
#Deleted in new
chr6_GL000253v2_alt	2925765	2942812	chr6_GL000253v2_alt:2925765-2942812	1	+	2927827	2942627	789624	31	134,212,178,100,73,144,152,80,143,91,217,475,191,298,211,1854,269,131,130,86,225,141,72,168,83,211,99,213,95,91,326,	0,1962,3007,3536,3725,4446,4735,5067,5295,6047,6257,7040,8419,8823,9866,10414,12654,13134,13511,13747,14028,14407,14669,14857,15242,15484,15785,16008,16317,16509,16721,
#Deleted in new
chr6_GL000253v2_alt	2928116	2928248	chr6_GL000253v2_alt:2928116-2928248	3	+	2928116	2928116	789624	1	132,	0,
#Deleted in new
chr6_GL000253v2_alt	2929942	2930538	chr6_GL000253v2_alt:2929942-2930538	0	+	2929942	2929942	8553170	2	413,38,	0,558,
#Deleted in new
chr6_GL000253v2_alt	2930794	2932115	chr6_GL000253v2_alt:2930794-2932115	0	+	2930794	2930794	8553170	3	409,91,93,	0,1018,1228,
#Deleted in new
chr6_GL000253v2_alt	2933680	2934809	chr6_GL000253v2_alt:2933680-2934809	0	+	2933680	2933680	8553170	2	695,221,	0,908,
#Deleted in new
chr6_GL000253v2_alt	2938994	2939797	chr6_GL000253v2_alt:2938994-2939797	0	+	2938994	2938994	8553170	2	412,285,	0,518,
#Deleted in new
chr6_GL000253v2_alt	2939447	2940357	chr6_GL000253v2_alt:2939447-2940357	0	+	2939447	2939447	8553170	2	571,185,	0,725,
#Deleted in new
chr6_GL000253v2_alt	2940282	2940750	chr6_GL000253v2_alt:2940282-2940750	0	+	2940282	2940282	8553170	2	31,316,	0,152,
#Deleted in new
chr6_GL000253v2_alt	2940400	2941291	chr6_GL000253v2_alt:2940400-2941291	0	+	2940400	2940400	8553170	2	690,42,	0,849,
#Deleted in new
chr6_GL000253v2_alt	2940416	2941852	chr6_GL000253v2_alt:2940416-2941852	0	+	2940416	2940416	8553170	4	90,468,211,302,	0,206,833,1134,
#Deleted in new
chr6_GL000253v2_alt	2941287	2942812	chr6_GL000253v2_alt:2941287-2942812	0	+	2941287	2941287	8553170	5	173,99,213,95,538,	0,263,486,795,987,
#Deleted in new
chr6_GL000253v2_alt	2941576	2942812	chr6_GL000253v2_alt:2941576-2942812	0	+	2941576	2941576	8553170	3	73,404,538,	0,197,698,
#Deleted in new
chr6_GL000253v2_alt	2941875	2942812	chr6_GL000253v2_alt:2941875-2942812	0	+	2941875	2941875	8553170	3	302,91,326,	0,399,611,
#Deleted in new
chr6_GL000253v2_alt	2944067	2957751	chr6_GL000253v2_alt:2944067-2957751	3	-	2944170	2956809	789624	25	199,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,282,	0,472,1171,1357,1617,1764,2076,2292,2511,2748,3084,3797,4868,5060,5503,5924,6385,7372,8569,9655,9889,10177,10488,12634,13402,
#Deleted in new
chr6_GL000253v2_alt	2944067	2957439	chr6_GL000253v2_alt:2944067-2957439	1	-	2944170	2956809	789624	25	199,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,147,	0,472,1171,1357,1617,1764,2076,2292,2511,2748,3084,3797,4868,5060,5503,5924,6385,7372,8569,9655,9889,10177,10488,12634,13225,
#Deleted in new
chr6_GL000253v2_alt	2944067	2945977	chr6_GL000253v2_alt:2944067-2945977	0	-	2944170	2945977	789624	4	199,108,60,146,	0,1171,1617,1764,
#Deleted in new
chr6_GL000253v2_alt	2944067	2957681	chr6_GL000253v2_alt:2944067-2957681	1	-	2944170	2956809	789624	25	199,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,254,75,54,197,118,121,236,	0,472,1171,1357,1617,1764,2076,2292,2511,2748,3084,3797,4868,5060,5503,5924,6385,7372,8569,9655,9889,10177,10488,12634,13378,
#Deleted in new
chr6_GL000253v2_alt	2944067	2946268	chr6_GL000253v2_alt:2944067-2946268	0	-	2944170	2946268	789624	6	199,108,144,60,147,125,	0,1171,1357,1617,1764,2076,
#Deleted in new
chr6_GL000253v2_alt	2944067	2944828	chr6_GL000253v2_alt:2944067-2944828	0	-	2944067	2944067	8553170	2	199,289,	0,472,
#Deleted in new
chr6_GL000253v2_alt	2944067	2945579	chr6_GL000253v2_alt:2944067-2945579	0	-	2944067	2944067	8553170	4	199,147,108,155,	0,472,1171,1357,
#Deleted in new
chr6_GL000253v2_alt	2944068	2957746	chr6_GL000253v2_alt:2944068-2957746	1	-	2944170	2956809	789624	24	198,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,277,	0,1170,1356,1616,1763,2075,2291,2510,2747,3083,3796,4867,5059,5502,5923,6384,7371,8568,9654,9888,10176,10487,12633,13401,
#Deleted in new
chr6_GL000253v2_alt	2944068	2957746	chr6_GL000253v2_alt:2944068-2957746	1	-	2944170	2956809	0	23	198,108,60,147,125,103,54,170,189,15,85,113,78,253,198,130,236,75,54,197,118,121,277,	0,1170,1616,1763,2075,2291,2510,2747,3083,4068,4867,5059,5502,5923,6384,7371,8568,9654,9888,10176,10487,12633,13401,
#Deleted in new
chr6_GL000253v2_alt	2945864	2947185	chr6_GL000253v2_alt:2945864-2947185	0	-	2945864	2945864	8553170	3	768,170,34,	0,951,1287,
#Deleted in new
chr6_GL000253v2_alt	2946887	2949362	chr6_GL000253v2_alt:2946887-2949362	0	-	2946887	2946887	8553170	5	98,292,287,88,235,	0,264,977,2048,2240,
#Deleted in new
chr6_GL000253v2_alt	2947258	2957724	chr6_GL000253v2_alt:2947258-2957724	0	-	2947258	2956809	789624	16	185,287,88,113,108,78,253,198,130,236,75,54,197,118,121,166,	0,606,1677,1869,2094,2312,2733,3194,4181,5378,6464,6698,6986,7297,9443,10300,
#Deleted in new
chr6_GL000253v2_alt	2947719	2949246	chr6_GL000253v2_alt:2947719-2949246	0	-	2947719	2947719	8553170	3	432,88,119,	0,1216,1408,
#Deleted in new
chr6_GL000253v2_alt	2947867	2950115	chr6_GL000253v2_alt:2947867-2950115	0	-	2947867	2950115	789624	5	284,88,113,105,124,	0,1068,1260,1703,2124,
#Deleted in new
chr6_GL000253v2_alt	2947905	2950536	chr6_GL000253v2_alt:2947905-2950536	0	-	2947905	2950536	789624	7	246,88,113,78,96,31,84,	0,1030,1222,1665,2086,2308,2547,
#Deleted in new
chr6_GL000253v2_alt	2947994	2950607	chr6_GL000253v2_alt:2947994-2950607	0	-	2947994	2947994	8553170	4	157,88,253,155,	0,941,1997,2458,
#Deleted in new
chr6_GL000253v2_alt	2948148	2950549	chr6_GL000253v2_alt:2948148-2950549	0	-	2948148	2950549	789624	5	3,88,113,253,97,	0,787,979,1843,2304,
#Deleted in new
chr6_GL000253v2_alt	2949362	2957432	chr6_GL000253v2_alt:2949362-2957432	0	-	2949362	2956809	789624	12	98,78,253,198,130,236,75,54,197,118,121,152,	0,208,629,1090,2077,3274,4360,4594,4882,5193,7339,7918,
#Deleted in new
chr6_GL000253v2_alt	2949539	2950231	chr6_GL000253v2_alt:2949539-2950231	0	-	2949539	2949539	8553170	2	109,240,	0,452,
#Deleted in new
chr6_GL000253v2_alt	2952636	2956966	chr6_GL000253v2_alt:2952636-2956966	0	-	2952636	2956809	789624	6	236,75,197,118,121,19,	0,1086,1608,1919,4065,4311,
#Deleted in new
chr6_GL000253v2_alt	2952636	2957404	chr6_GL000253v2_alt:2952636-2957404	0	-	2952636	2956809	789624	6	236,75,197,118,121,112,	0,1086,1608,1919,4065,4656,
#Deleted in new
chr6_GL000253v2_alt	2952636	2957204	chr6_GL000253v2_alt:2952636-2957204	0	-	2952636	2956809	789624	7	236,75,54,197,118,121,79,	0,1086,1320,1608,1919,4065,4489,
#Deleted in new
chr6_GL000253v2_alt	2952638	2957199	chr6_GL000253v2_alt:2952638-2957199	0	-	2952638	2956809	789624	7	234,75,54,197,118,121,252,	0,1084,1318,1606,1917,4063,4309,
#Deleted in new
chr6_GL000253v2_alt	2952639	2957694	chr6_GL000253v2_alt:2952639-2957694	0	-	2952639	2956809	789624	6	233,75,197,118,121,249,	0,1083,1605,1916,4062,4806,
#Deleted in new
chr6_GL000253v2_alt	2952645	2957021	chr6_GL000253v2_alt:2952645-2957021	0	-	2952645	2956809	789624	7	227,75,54,197,118,121,110,	0,1077,1311,1599,1910,4056,4266,
#Deleted in new
chr6_GL000253v2_alt	2952649	2957713	chr6_GL000253v2_alt:2952649-2957713	0	-	2952649	2956809	789624	7	223,75,54,197,118,121,268,	0,1073,1307,1595,1906,4052,4796,
#Deleted in new
chr6_GL000253v2_alt	2952725	2957369	chr6_GL000253v2_alt:2952725-2957369	0	-	2952725	2956809	789624	6	147,75,197,118,121,89,	0,997,1519,1830,3976,4555,
#Deleted in new
chr6_GL000253v2_alt	2952744	2957691	chr6_GL000253v2_alt:2952744-2957691	0	-	2952744	2956809	789624	7	146,75,54,197,118,121,133,	0,978,1212,1500,1811,3957,4814,
#Deleted in new
chr6_GL000253v2_alt	2952751	2957491	chr6_GL000253v2_alt:2952751-2957491	0	-	2952751	2956809	789624	6	121,75,197,118,121,22,	0,971,1493,1804,3950,4718,
#Deleted in new
chr6_GL000253v2_alt	2952833	2957025	chr6_GL000253v2_alt:2952833-2957025	0	-	2952833	2956809	789624	6	39,75,54,197,118,324,	0,889,1123,1411,1722,3868,
#Deleted in new
chr6_GL000253v2_alt	2953773	2957368	chr6_GL000253v2_alt:2953773-2957368	0	-	2953773	2953773	8553170	6	24,54,219,118,121,76,	0,183,471,782,2928,3519,
#Deleted in new
chr6_GL000253v2_alt	2953957	2957161	chr6_GL000253v2_alt:2953957-2957161	0	-	2953957	2956809	789624	5	53,197,118,121,55,	0,287,598,2744,3149,
#Deleted in new
chr6_GL000253v2_alt	2954275	2957684	chr6_GL000253v2_alt:2954275-2957684	0	-	2954275	2954275	8553170	4	188,118,121,215,	0,280,2426,3194,
#Deleted in new
chr6_GL000253v2_alt	2957461	2963128	chr6_GL000253v2_alt:2957461-2963128	1	+	2961619	2962834	789624	5	136,155,74,99,458,	0,4056,4809,4964,5209,
#Deleted in new
chr6_GL000253v2_alt	2957462	2963256	chr6_GL000253v2_alt:2957462-2963256	3	+	2961619	2963135	0	6	135,155,74,99,99,147,	0,4055,4808,4963,5208,5647,
#Deleted in new
chr6_GL000253v2_alt	2960939	2963256	chr6_GL000253v2_alt:2960939-2963256	1	+	2961012	2963135	0	6	187,155,74,99,99,147,	0,578,1331,1486,1731,2170,
#Deleted in new
chr6_GL000253v2_alt	2963343	2965819	chr6_GL000253v2_alt:2963343-2965819	3	-	2964109	2964994	789624	1	2476,	0,
#Deleted in new
chr6_GL000253v2_alt	2963374	2965768	chr6_GL000253v2_alt:2963374-2965768	3	+	2963374	2963374	8553170	2	351,322,	0,2072,
#Deleted in new
chr6_GL000253v2_alt	2966275	2971330	chr6_GL000253v2_alt:2966275-2971330	3	-	2967312	2969525	789624	4	1482,725,163,423,	0,2624,3612,4632,
#Deleted in new
chr6_GL000253v2_alt	2967122	2970437	chr6_GL000253v2_alt:2967122-2970437	1	-	2967312	2969525	789624	3	635,725,550,	0,1777,2765,
#Deleted in new
chr6_GL000253v2_alt	2967122	2970908	chr6_GL000253v2_alt:2967122-2970908	1	-	2967312	2969525	789624	4	635,728,163,288,	0,1777,2765,3498,
#Deleted in new
chr6_GL000253v2_alt	2967122	2970677	chr6_GL000253v2_alt:2967122-2970677	1	-	2967312	2969525	789624	4	635,728,163,72,	0,1777,2765,3483,
#Deleted in new
chr6_GL000253v2_alt	2967122	2970897	chr6_GL000253v2_alt:2967122-2970897	1	-	2967312	2969525	789624	4	635,725,163,277,	0,1777,2765,3498,
#Deleted in new
chr6_GL000253v2_alt	2968334	2968448	chr6_GL000253v2_alt:2968334-2968448	3	+	2968334	2968334	8553170	1	114,	0,
#Deleted in new
chr6_GL000253v2_alt	2968929	2970844	chr6_GL000253v2_alt:2968929-2970844	0	-	2968929	2969525	789624	3	695,67,224,	0,958,1691,
#Deleted in new
chr6_GL000253v2_alt	2969031	2970489	chr6_GL000253v2_alt:2969031-2970489	0	-	2969031	2969525	789624	3	596,163,43,	0,856,1415,
#Deleted in new
chr6_GL000253v2_alt	2969069	2970237	chr6_GL000253v2_alt:2969069-2970237	0	-	2969069	2969525	789624	3	558,163,101,	0,818,1067,
#Deleted in new
chr6_GL000253v2_alt	2969204	2970881	chr6_GL000253v2_alt:2969204-2970881	0	-	2969204	2969525	789624	3	423,67,261,	0,683,1416,
#Deleted in new
chr6_GL000253v2_alt	2969256	2970232	chr6_GL000253v2_alt:2969256-2970232	0	-	2969256	2969525	789624	3	368,163,96,	0,631,880,
#Deleted in new
chr6_GL000253v2_alt	2970282	2975117	chr6_GL000253v2_alt:2970282-2975117	1	+	2970494	2974973	789624	7	258,83,103,116,76,190,235,	0,1585,2632,3303,3861,4083,4600,
#Deleted in new
chr6_GL000253v2_alt	2970926	2977329	chr6_GL000253v2_alt:2970926-2977329	1	+	2971878	2977329	789624	5	329,83,103,77,234,	0,941,1988,2659,6169,
#Deleted in new
chr6_GL000253v2_alt	2970926	2977329	chr6_GL000253v2_alt:2970926-2977329	3	+	2971878	2977329	789624	7	329,83,103,116,76,129,419,	0,941,1988,2659,3217,5276,5984,
#Deleted in new
chr6_GL000253v2_alt	2971110	2975117	chr6_GL000253v2_alt:2971110-2975117	1	+	2971878	2974973	0	7	145,83,103,116,76,190,235,	0,757,1804,2475,3033,3255,3772,
#Deleted in new
chr6_GL000253v2_alt	2971127	2975390	chr6_GL000253v2_alt:2971127-2975390	0	+	2971127	2971127	8553170	5	128,83,103,970,508,	0,740,1787,2458,3755,
#Deleted in new
chr6_GL000253v2_alt	2971133	2973288	chr6_GL000253v2_alt:2971133-2973288	0	+	2971133	2971133	8553170	3	122,83,374,	0,734,1781,
#Deleted in new
chr6_GL000253v2_alt	2971140	2974511	chr6_GL000253v2_alt:2971140-2974511	0	+	2971140	2971140	8553170	5	115,83,103,116,368,	0,727,1774,2445,3003,
#Deleted in new
chr6_GL000253v2_alt	2971144	2975117	chr6_GL000253v2_alt:2971144-2975117	0	+	2971144	2971144	8553170	7	111,83,121,116,76,190,235,	0,723,1752,2441,2999,3221,3738,
#Deleted in new
chr6_GL000253v2_alt	2971148	2977376	chr6_GL000253v2_alt:2971148-2977376	3	+	2971878	2976911	789624	8	107,83,103,116,76,190,129,466,	0,719,1766,2437,2995,3217,5054,5762,
#Deleted in new
chr6_GL000253v2_alt	2971338	2975117	chr6_GL000253v2_alt:2971338-2975117	1	+	2971878	2974973	0	7	105,83,103,116,76,190,235,	0,529,1576,2247,2805,3027,3544,
#Deleted in new
chr6_GL000253v2_alt	2971401	2975117	chr6_GL000253v2_alt:2971401-2975117	1	+	2971878	2974973	0	7	133,83,103,116,76,190,235,	0,466,1513,2184,2742,2964,3481,
#Deleted in new
chr6_GL000253v2_alt	2971866	2977393	chr6_GL000253v2_alt:2971866-2977393	1	+	2971878	2976911	789624	7	84,103,116,76,190,129,483,	0,1048,1719,2277,2499,4336,5044,
#Deleted in new
chr6_GL000253v2_alt	2974164	2977497	chr6_GL000253v2_alt:2974164-2977497	0	+	2974164	2977329	789624	4	55,36,129,587,	0,1855,2038,2746,
#Deleted in new
chr6_GL000253v2_alt	2975425	2978593	chr6_GL000253v2_alt:2975425-2978593	0	+	2975425	2975425	8553170	2	906,1683,	0,1485,
#Deleted in new
chr6_GL000253v2_alt	2975997	2978593	chr6_GL000253v2_alt:2975997-2978593	3	+	2975997	2977329	789624	3	58,129,1683,	0,205,913,
#Deleted in new
chr6_GL000253v2_alt	2981730	2985425	chr6_GL000253v2_alt:2981730-2985425	3	-	2982003	2985421	789624	3	437,168,125,	0,2418,3570,
#Deleted in new
chr6_GL000253v2_alt	2981730	2989087	chr6_GL000253v2_alt:2981730-2989087	0	-	2982003	2989087	789624	4	437,168,292,53,	0,2418,6366,7304,
#Deleted in new
chr6_GL000253v2_alt	2981730	2985412	chr6_GL000253v2_alt:2981730-2985412	0	-	2981730	2981730	8553170	2	437,1264,	0,2418,
#Deleted in new
chr6_GL000253v2_alt	2981730	2989087	chr6_GL000253v2_alt:2981730-2989087	0	-	2981730	2981730	8553170	4	437,168,172,53,	0,2418,4547,7304,
#Deleted in new
chr6_GL000253v2_alt	2981730	2988257	chr6_GL000253v2_alt:2981730-2988257	0	-	2981730	2981730	8553170	6	437,207,168,159,212,161,	0,1738,2418,4547,4963,6366,
#Deleted in new
chr6_GL000253v2_alt	2981730	2986524	chr6_GL000253v2_alt:2981730-2986524	0	-	2981730	2981730	8553170	3	437,168,247,	0,2418,4547,
#Deleted in new
chr6_GL000253v2_alt	2981730	2985412	chr6_GL000253v2_alt:2981730-2985412	0	-	2981730	2981730	8553170	3	437,168,206,	0,2418,3476,
#Deleted in new
chr6_GL000253v2_alt	2986395	2987008	chr6_GL000253v2_alt:2986395-2987008	0	-	2986395	2986395	8553170	2	54,315,	0,298,
#Deleted in new
chr6_GL000253v2_alt	2991995	3008121	chr6_GL000253v2_alt:2991995-3008121	1	-	2992258	3007816	789624	18	347,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,462,	0,549,693,875,1092,1300,1774,2066,2632,3129,3590,4630,4855,6078,6410,9998,13994,15664,
#Deleted in new
chr6_GL000253v2_alt	2992001	3008464	chr6_GL000253v2_alt:2992001-3008464	3	-	2992258	3008458	789624	20	341,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,67,57,267,	0,543,687,869,1086,1294,1768,2060,2626,3123,3584,4624,4849,6072,6404,9992,13988,14320,15120,16196,
#Deleted in new
chr6_GL000253v2_alt	2992001	3008388	chr6_GL000253v2_alt:2992001-3008388	0	-	2992001	2992001	789624	19	341,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,57,191,	0,543,687,869,1086,1294,1768,2060,2626,3123,3584,4624,4849,6072,6404,9992,13988,15120,16196,
#Deleted in new
chr6_GL000253v2_alt	2992001	3008121	chr6_GL000253v2_alt:2992001-3008121	0	-	2992001	2992001	789624	20	341,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,67,57,462,	0,543,687,869,1086,1294,1768,2060,2626,3123,3584,4624,4849,6072,6404,9992,13988,14320,15120,15658,
#Deleted in new
chr6_GL000253v2_alt	2992001	2993436	chr6_GL000253v2_alt:2992001-2993436	0	-	2992001	2992001	8553170	5	341,47,99,77,349,	0,543,687,869,1086,
#Deleted in new
chr6_GL000253v2_alt	2992001	2995649	chr6_GL000253v2_alt:2992001-2995649	0	-	2992001	2992001	8553170	10	341,47,99,77,63,57,397,124,50,64,	0,543,687,869,1086,1294,1768,2626,3123,3584,
#Deleted in new
chr6_GL000253v2_alt	2992433	2993368	chr6_GL000253v2_alt:2992433-2993368	0	-	2992433	2992433	8553170	4	158,99,77,281,	0,255,437,654,
#Deleted in new
chr6_GL000253v2_alt	2992621	2993350	chr6_GL000253v2_alt:2992621-2993350	0	-	2992621	2992621	8553170	3	166,77,263,	0,249,466,
#Deleted in new
chr6_GL000253v2_alt	2992699	2995292	chr6_GL000253v2_alt:2992699-2995292	0	-	2992699	2992699	8553170	8	88,77,63,57,64,105,124,168,	0,171,388,596,1070,1362,1928,2425,
#Deleted in new
chr6_GL000253v2_alt	2992819	2996693	chr6_GL000253v2_alt:2992819-2996693	0	-	2992819	2992819	8553170	8	128,265,64,105,124,50,64,68,	0,268,950,1242,1808,2305,2766,3806,
#Deleted in new
chr6_GL000253v2_alt	2994061	3008381	chr6_GL000253v2_alt:2994061-3008381	0	-	2994061	2994061	8553170	11	105,124,50,64,102,115,123,74,86,87,184,	0,566,1063,1524,2564,2789,4012,4344,7932,11928,14136,
#Deleted in new
chr6_GL000253v2_alt	2995602	3007914	chr6_GL000253v2_alt:2995602-3007914	0	-	2995602	3007816	789624	8	47,102,115,123,74,86,87,255,	0,1023,1248,2471,2803,6391,10387,12057,
#Deleted in new
chr6_GL000253v2_alt	2996492	2998103	chr6_GL000253v2_alt:2996492-2998103	0	-	2996492	2996492	8553170	3	235,115,30,	0,358,1581,
#Deleted in new
chr6_GL000253v2_alt	2996635	2997341	chr6_GL000253v2_alt:2996635-2997341	0	-	2996635	2996635	8553170	2	92,491,	0,215,
#Deleted in new
chr6_GL000253v2_alt	3011933	3015647	chr6_GL000253v2_alt:3011933-3015647	3	+	3011955	3015643	789624	6	74,330,264,156,67,29,	0,573,986,3144,3470,3685,
#Deleted in new
chr6_GL000253v2_alt	3011952	3022964	chr6_GL000253v2_alt:3011952-3022964	3	+	3011955	3022850	789624	6	55,330,264,156,123,338,	0,554,967,3125,8599,10674,
#Deleted in new
chr6_GL000253v2_alt	3017385	3018862	chr6_GL000253v2_alt:3017385-3018862	0	-	3017385	3017385	8553170	3	206,126,52,	0,328,1425,
#Deleted in new
chr6_GL000253v2_alt	3017385	3018862	chr6_GL000253v2_alt:3017385-3018862	3	-	3017390	3018862	789624	3	205,126,52,	0,328,1425,
#Deleted in new
chr6_GL000253v2_alt	3017390	3018862	chr6_GL000253v2_alt:3017390-3018862	1	-	3017588	3018862	789624	2	449,52,	0,1420,
#Deleted in new
chr6_GL000253v2_alt	3017390	3018862	chr6_GL000253v2_alt:3017390-3018862	1	-	3017588	3018862	789624	3	221,126,52,	0,323,1420,
#Deleted in new
chr6_GL000253v2_alt	3020405	3022850	chr6_GL000253v2_alt:3020405-3022850	3	+	3020405	3022850	789624	3	55,123,224,	0,146,2221,
#Deleted in new
chr6_GL000253v2_alt	3020405	3022850	chr6_GL000253v2_alt:3020405-3022850	0	+	3020405	3022850	789624	3	55,123,345,	0,146,2100,
#Deleted in new
chr6_GL000253v2_alt	3020405	3022850	chr6_GL000253v2_alt:3020405-3022850	0	+	3020405	3020405	8553170	2	269,224,	0,2221,
#Deleted in new
chr6_GL000253v2_alt	3023639	3031757	chr6_GL000253v2_alt:3023639-3031757	0	+	3023639	3023639	8553170	7	90,135,43,348,91,258,1741,	0,4410,4808,5045,5548,5993,6377,
#Deleted in new
chr6_GL000253v2_alt	3023693	3026891	chr6_GL000253v2_alt:3023693-3026891	3	-	3024141	3026725	789624	3	663,111,218,	0,1445,2980,
#Deleted in new
chr6_GL000253v2_alt	3023693	3026725	chr6_GL000253v2_alt:3023693-3026725	1	-	3024141	3024351	789624	4	663,111,111,52,	0,1445,2305,2980,
#Deleted in new
chr6_GL000253v2_alt	3028418	3031757	chr6_GL000253v2_alt:3028418-3031757	3	+	3028429	3030090	789624	6	72,348,91,41,99,1741,	0,266,769,1214,1373,1598,
#Deleted in new
chr6_GL000253v2_alt	3028429	3031757	chr6_GL000253v2_alt:3028429-3031757	1	+	3028429	3030090	789624	4	61,348,99,1741,	0,255,1362,1587,
#Deleted in new
chr6_GL000253v2_alt	3028429	3031757	chr6_GL000253v2_alt:3028429-3031757	1	+	3028429	3030121	789624	4	61,348,80,1741,	0,255,1381,1587,
#Deleted in new
chr6_GL000253v2_alt	3028429	3031757	chr6_GL000253v2_alt:3028429-3031757	1	+	3028429	3030121	789624	6	61,348,91,41,80,1741,	0,255,758,1203,1381,1587,
#Deleted in new
chr6_GL000253v2_alt	3028429	3031757	chr6_GL000253v2_alt:3028429-3031757	1	+	3028429	3030121	789624	5	61,348,41,99,1741,	0,255,1203,1362,1587,
#Deleted in new
chr6_GL000253v2_alt	3028429	3031757	chr6_GL000253v2_alt:3028429-3031757	0	+	3028429	3028429	8553170	5	61,348,91,258,1741,	0,255,758,1203,1587,
#Deleted in new
chr6_GL000253v2_alt	3028429	3031757	chr6_GL000253v2_alt:3028429-3031757	0	+	3028429	3028429	8553170	5	61,348,91,41,1966,	0,255,758,1203,1362,
#Deleted in new
chr6_GL000253v2_alt	3032084	3033924	chr6_GL000253v2_alt:3032084-3033924	0	-	3032243	3033924	789624	6	316,101,120,74,100,13,	0,505,1135,1413,1608,1827,
#Deleted in new
chr6_GL000253v2_alt	3032084	3034839	chr6_GL000253v2_alt:3032084-3034839	3	-	3032283	3034208	789624	6	316,150,120,74,100,928,	0,505,1135,1413,1608,1827,
#Deleted in new
chr6_GL000253v2_alt	3032084	3035310	chr6_GL000253v2_alt:3032084-3035310	1	-	3032283	3034208	789624	7	316,150,120,74,100,357,213,	0,505,1135,1413,1608,1827,3013,
#Deleted in new
chr6_GL000253v2_alt	3032084	3035664	chr6_GL000253v2_alt:3032084-3035664	1	-	3032283	3034208	789624	7	316,150,120,74,100,361,567,	0,505,1135,1413,1608,1827,3013,
#Deleted in new
chr6_GL000253v2_alt	3032084	3034554	chr6_GL000253v2_alt:3032084-3034554	0	-	3032084	3032084	8553170	4	316,150,573,643,	0,505,1135,1827,
#Deleted in new
chr6_GL000253v2_alt	3032084	3035274	chr6_GL000253v2_alt:3032084-3035274	0	-	3032084	3032084	8553170	6	316,150,120,74,100,177,	0,505,1135,1413,1608,3013,
#Deleted in new
chr6_GL000253v2_alt	3032084	3035309	chr6_GL000253v2_alt:3032084-3035309	0	-	3032084	3032084	8553170	5	316,150,120,100,212,	0,505,1135,1608,3013,
#Deleted in new
chr6_GL000253v2_alt	3032621	3034843	chr6_GL000253v2_alt:3032621-3034843	0	-	3032621	3034208	789624	6	118,120,74,100,361,114,	0,598,876,1071,1290,2108,
#Deleted in new
chr6_GL000253v2_alt	3032652	3034548	chr6_GL000253v2_alt:3032652-3034548	0	-	3032652	3034208	789624	6	87,120,74,100,361,140,	0,567,845,1040,1259,1756,
#Deleted in new
chr6_GL000253v2_alt	3033227	3035292	chr6_GL000253v2_alt:3033227-3035292	0	-	3033227	3033227	8553170	3	565,361,195,	0,684,1870,
#Deleted in new
chr6_GL000253v2_alt	3035627	3042369	chr6_GL000253v2_alt:3035627-3042369	1	-	3035888	3041351	0	7	423,182,107,126,110,89,523,	0,1636,2985,3255,3573,5685,6219,
#Deleted in new
chr6_GL000253v2_alt	3035627	3044810	chr6_GL000253v2_alt:3035627-3044810	3	-	3035888	3041351	0	8	423,182,107,126,110,89,125,35,	0,1636,2985,3255,3573,5685,8683,9148,
#Deleted in new
chr6_GL000253v2_alt	3035627	3041623	chr6_GL000253v2_alt:3035627-3041623	1	-	3035888	3041351	0	7	423,182,107,126,110,151,28,	0,1636,2985,3255,3573,5685,5968,
#Deleted in new
chr6_GL000253v2_alt	3035627	3041618	chr6_GL000253v2_alt:3035627-3041618	1	-	3035888	3041351	0	6	423,182,107,126,110,306,	0,1636,2985,3255,3573,5685,
#Deleted in new
chr6_GL000253v2_alt	3035629	3041596	chr6_GL000253v2_alt:3035629-3041596	1	-	3035888	3041351	0	7	421,182,107,126,110,89,63,	0,1634,2983,3253,3571,5683,5904,
#Deleted in new
chr6_GL000253v2_alt	3045037	3049265	chr6_GL000253v2_alt:3045037-3049265	0	+	3045513	3049265	789624	8	72,27,160,124,81,63,122,45,	0,203,463,1172,2870,3101,3897,4183,
#Deleted in new
chr6_GL000253v2_alt	3045043	3052473	chr6_GL000253v2_alt:3045043-3052473	0	+	3045513	3052473	789624	10	66,160,124,81,63,122,110,36,83,46,	0,457,1166,2864,3095,3891,4177,4533,5224,7384,
#Deleted in new
chr6_GL000253v2_alt	3045046	3052473	chr6_GL000253v2_alt:3045046-3052473	0	+	3045513	3052473	789624	10	221,160,124,81,63,122,110,36,83,46,	0,454,1163,2861,3092,3888,4174,4530,5221,7381,
#Deleted in new
chr6_GL000253v2_alt	3045063	3048511	chr6_GL000253v2_alt:3045063-3048511	0	+	3045063	3045063	8553170	5	46,160,124,81,373,	0,437,1146,2844,3075,
#Deleted in new
chr6_GL000253v2_alt	3045066	3052473	chr6_GL000253v2_alt:3045066-3052473	0	+	3045066	3045066	789624	10	43,160,124,81,63,122,161,36,83,46,	0,434,1143,2841,3072,3868,4103,4510,5201,7361,
#Deleted in new
chr6_GL000253v2_alt	3045067	3052473	chr6_GL000253v2_alt:3045067-3052473	0	+	3045513	3052473	789624	10	42,160,124,81,63,122,110,36,83,46,	0,433,1142,2840,3071,3867,4153,4509,5200,7360,
#Deleted in new
chr6_GL000253v2_alt	3045067	3052473	chr6_GL000253v2_alt:3045067-3052473	3	+	3045513	3052473	789624	10	42,160,124,81,63,122,161,36,83,46,	0,433,1142,2840,3071,3867,4102,4509,5200,7360,
#Deleted in new
chr6_GL000253v2_alt	3045067	3052473	chr6_GL000253v2_alt:3045067-3052473	0	+	3045067	3045067	8553170	9	42,160,124,81,63,122,122,36,46,	0,433,1142,2840,3071,3867,4141,4509,7360,
#Deleted in new
chr6_GL000253v2_alt	3046292	3052473	chr6_GL000253v2_alt:3046292-3052473	0	+	3046292	3046292	8553170	7	41,81,63,122,110,36,46,	0,1615,1846,2642,2928,3284,6135,
#Deleted in new
chr6_GL000253v2_alt	3049008	3052473	chr6_GL000253v2_alt:3049008-3052473	0	+	3049008	3052473	789624	5	48,110,36,83,46,	0,212,568,1259,3419,
#Deleted in new
chr6_GL000253v2_alt	3162874	3168012	chr6_GL000253v2_alt:3162874-3168012	0	-	3162874	3162874	8553170	3	2287,2150,179,	0,2383,4959,
#Deleted in new
chr6_GL000253v2_alt	3164267	3168122	chr6_GL000253v2_alt:3164267-3168122	3	-	3164934	3167992	789624	6	894,223,183,263,193,289,	0,990,1387,2136,2947,3566,
#Deleted in new
chr6_GL000253v2_alt	3164267	3168038	chr6_GL000253v2_alt:3164267-3168038	0	-	3165388	3167992	789624	6	894,137,183,263,193,205,	0,990,1387,2136,2947,3566,
#Deleted in new
chr6_GL000253v2_alt	3164267	3168021	chr6_GL000253v2_alt:3164267-3168021	0	-	3164267	3164267	8553170	4	1570,263,193,188,	0,2136,2947,3566,
#Deleted in new
chr6_GL000253v2_alt	3164267	3168032	chr6_GL000253v2_alt:3164267-3168032	0	-	3166606	3167992	789624	5	894,223,183,263,199,	0,990,1387,2136,3566,
#Deleted in new
chr6_GL000253v2_alt	3168407	3168651	chr6_GL000253v2_alt:3168407-3168651	3	-	3168407	3168407	8553170	1	244,	0,
#Deleted in new
chr6_GL000253v2_alt	3225155	3242420	chr6_GL000253v2_alt:3225155-3242420	0	+	3225155	3225155	8553170	6	86,174,99,134,139,141,	0,13420,13677,13976,15730,17124,
#Deleted in new
chr6_GL000253v2_alt	3225198	3234109	chr6_GL000253v2_alt:3225198-3234109	0	+	3232967	3234109	789624	4	43,145,210,163,	0,7670,7971,8748,
#Deleted in new
chr6_GL000253v2_alt	3225310	3240953	chr6_GL000253v2_alt:3225310-3240953	0	+	3225310	3225310	8553170	5	67,174,99,134,68,	0,13265,13522,13821,15575,
#Deleted in new
chr6_GL000253v2_alt	3232691	3250651	chr6_GL000253v2_alt:3232691-3250651	3	+	3238638	3250334	789624	16	322,210,186,174,139,141,90,141,95,112,166,77,92,127,50,497,	0,478,1255,5884,8194,9588,11506,15244,15510,15701,15929,16202,16420,17012,17265,17463,
#Deleted in new
chr6_GL000253v2_alt	3232691	3250651	chr6_GL000253v2_alt:3232691-3250651	1	+	3233238	3250334	789624	18	322,238,186,174,99,134,139,141,90,141,95,112,166,77,92,127,50,497,	0,478,1255,5884,6141,6440,8194,9588,11506,15244,15510,15701,15929,16202,16420,17012,17265,17463,
#Deleted in new
chr6_GL000253v2_alt	3232691	3250651	chr6_GL000253v2_alt:3232691-3250651	1	+	3232967	3250334	0	16	322,174,99,134,139,141,90,141,95,112,166,77,92,127,50,497,	0,5884,6141,6440,8194,9588,11506,15244,15510,15701,15929,16202,16420,17012,17265,17463,
#Deleted in new
chr6_GL000253v2_alt	3232706	3250649	chr6_GL000253v2_alt:3232706-3250649	1	+	3232967	3250334	0	18	307,210,186,174,99,134,139,141,90,141,95,112,166,77,92,127,50,495,	0,463,1240,5869,6126,6425,8179,9573,11491,15229,15495,15686,15914,16187,16405,16997,17250,17448,
#Deleted in new
chr6_GL000253v2_alt	3232739	3238696	chr6_GL000253v2_alt:3232739-3238696	0	+	3232967	3238696	789624	3	274,210,121,	0,430,5836,
#Deleted in new
chr6_GL000253v2_alt	3232745	3248296	chr6_GL000253v2_alt:3232745-3248296	0	+	3232967	3248296	789624	9	268,174,99,134,139,141,90,141,95,	0,5830,6087,6386,8140,9534,11452,15190,15456,
#Deleted in new
chr6_GL000253v2_alt	3232917	3240024	chr6_GL000253v2_alt:3232917-3240024	0	+	3232917	3232917	8553170	6	96,210,186,174,99,893,	0,252,1029,5658,5915,6214,
#Deleted in new
chr6_GL000253v2_alt	3232977	3250649	chr6_GL000253v2_alt:3232977-3250649	1	+	3232979	3250334	789624	14	36,174,99,141,90,141,95,112,166,77,92,127,50,495,	0,5598,5855,9302,11220,14958,15224,15415,15643,15916,16134,16726,16979,17177,
#Deleted in new
chr6_GL000253v2_alt	3237430	3239248	chr6_GL000253v2_alt:3237430-3239248	0	+	3237430	3237430	8553170	4	146,174,99,117,	0,1145,1402,1701,
#Deleted in new
chr6_GL000253v2_alt	3238575	3244218	chr6_GL000253v2_alt:3238575-3244218	0	+	3238575	3244218	789624	4	174,99,141,21,	0,257,3704,5622,
#Deleted in new
chr6_GL000253v2_alt	3238575	3239261	chr6_GL000253v2_alt:3238575-3239261	0	+	3238575	3239261	789624	3	174,99,130,	0,257,556,
#Deleted in new
chr6_GL000253v2_alt	3238575	3250649	chr6_GL000253v2_alt:3238575-3250649	0	+	3238575	3238575	8553170	14	174,99,139,141,90,141,95,112,166,77,92,127,54,495,	0,257,2310,3704,5622,9360,9626,9817,10045,10318,10536,11128,11377,11579,
#Deleted in new
chr6_GL000253v2_alt	3239248	3248735	chr6_GL000253v2_alt:3239248-3248735	0	+	3239248	3239248	8553170	8	17,139,141,90,185,95,112,115,	0,1637,3031,4949,8643,8953,9144,9372,
#Deleted in new
chr6_GL000253v2_alt	3239414	3246691	chr6_GL000253v2_alt:3239414-3246691	3	-	3239414	3239414	789624	3	184,63,540,	0,891,6737,
#Deleted in new
chr6_GL000253v2_alt	3241017	3250649	chr6_GL000253v2_alt:3241017-3250649	0	+	3241017	3241017	8553170	10	1403,90,141,95,112,166,77,92,127,495,	0,3180,6918,7184,7375,7603,7876,8094,8686,9137,
#Deleted in new
chr6_GL000253v2_alt	3248649	3250649	chr6_GL000253v2_alt:3248649-3250649	0	+	3248649	3248649	8553170	6	137,77,92,127,50,211,	0,244,462,1054,1307,1789,
#Deleted in new
chr6_GL000253v2_alt	3250626	3255741	chr6_GL000253v2_alt:3250626-3255741	0	+	3251198	3255741	789624	14	51,166,234,186,174,102,137,139,132,102,138,98,118,144,	0,470,723,1357,1698,2092,2295,2724,3180,3593,3770,4402,4638,4971,
#Deleted in new
chr6_GL000253v2_alt	3250970	3255741	chr6_GL000253v2_alt:3250970-3255741	3	+	3251198	3255741	789624	13	292,234,186,174,102,137,139,132,102,138,98,118,144,	0,379,1013,1354,1748,1951,2380,2836,3249,3426,4058,4294,4627,
#Deleted in new
chr6_GL000253v2_alt	3251073	3251845	chr6_GL000253v2_alt:3251073-3251845	0	+	3251073	3251073	8553170	2	189,496,	0,276,
#Deleted in new
chr6_GL000253v2_alt	3251102	3252820	chr6_GL000253v2_alt:3251102-3252820	0	+	3251102	3251102	8553170	5	160,121,186,174,102,	0,360,881,1222,1616,
#Deleted in new
chr6_GL000253v2_alt	3251198	3255624	chr6_GL000253v2_alt:3251198-3255624	0	+	3251198	3251198	8553170	12	64,234,186,174,102,137,139,132,102,138,98,360,	0,151,785,1126,1520,1723,2152,2608,3021,3198,3830,4066,
#Deleted in new
chr6_GL000253v2_alt	3252257	3254528	chr6_GL000253v2_alt:3252257-3254528	0	+	3252257	3252257	8553170	6	241,102,568,132,102,132,	0,461,664,1549,1962,2139,
#Deleted in new
chr6_GL000253v2_alt	3252773	3254575	chr6_GL000253v2_alt:3252773-3254575	0	+	3252773	3252773	8553170	6	47,137,139,132,102,179,	0,148,577,1033,1446,1623,
#Deleted in new
chr6_GL000253v2_alt	3253334	3254575	chr6_GL000253v2_alt:3253334-3254575	0	+	3253334	3253334	8553170	4	155,132,102,179,	0,472,885,1062,
#Deleted in new
chr6_GL000253v2_alt	3253974	3254575	chr6_GL000253v2_alt:3253974-3254575	0	+	3253974	3253974	8553170	2	347,179,	0,422,
#Deleted in new
chr6_GL000253v2_alt	3254707	3255741	chr6_GL000253v2_alt:3254707-3255741	0	+	3254707	3254707	8553170	2	419,477,	0,557,
#Deleted in new
chr6_GL000253v2_alt	3369798	3403206	chr6_GL000253v2_alt:3369798-3403206	3	-	3369798	3403198	789624	18	297,324,318,315,309,288,309,306,333,306,291,297,369,264,157,116,1839,411,	0,2856,3585,4017,4748,5322,7185,8842,14240,16574,17242,19619,20956,23988,24426,30277,30812,32997,
#Deleted in new
chr6_GL000253v2_alt	3383513	3383634	chr6_GL000253v2_alt:3383513-3383634	3	-	3383513	3383513	8553170	1	121,	0,
#Deleted in new
chr6_GL000253v2_alt	3400578	3403206	chr6_GL000253v2_alt:3400578-3403206	0	-	3400578	3400578	8553170	1	2628,	0,
#Deleted in new
chr6_GL000253v2_alt	3403175	3403206	chr6_GL000253v2_alt:3403175-3403206	0	-	3403175	3403198	789624	1	31,	0,
#Deleted in new
chr6_GL000253v2_alt	3403175	3403206	chr6_GL000253v2_alt:3403175-3403206	0	-	3403175	3403175	8553170	1	31,	0,
#Deleted in new
chr6_GL000253v2_alt	3453359	3458084	chr6_GL000253v2_alt:3453359-3458084	3	-	3454222	3457103	789624	6	1040,186,216,91,81,112,	0,1178,2009,3450,3736,4613,
#Deleted in new
chr6_GL000253v2_alt	3453359	3456953	chr6_GL000253v2_alt:3453359-3456953	1	-	3454222	3456828	789624	4	1040,186,539,144,	0,1178,2009,3450,
#Deleted in new
chr6_GL000253v2_alt	3453359	3454858	chr6_GL000253v2_alt:3453359-3454858	0	-	3453359	3453359	8553170	2	1040,321,	0,1178,
#Deleted in new
chr6_GL000253v2_alt	3453359	3456924	chr6_GL000253v2_alt:3453359-3456924	0	-	3453359	3453359	8553170	3	1040,186,1556,	0,1178,2009,
#Deleted in new
chr6_GL000253v2_alt	3453359	3456938	chr6_GL000253v2_alt:3453359-3456938	0	-	3453359	3453359	8553170	3	1040,186,129,	0,1178,3450,
#Deleted in new
chr6_GL000253v2_alt	3455495	3459374	chr6_GL000253v2_alt:3455495-3459374	0	-	3455495	3457103	789624	5	89,91,81,100,136,	0,1314,1600,3242,3743,
#Deleted in new
chr6_GL000253v2_alt	3456981	3458961	chr6_GL000253v2_alt:3456981-3458961	0	-	3456981	3456981	8553170	3	195,201,224,	0,991,1756,
#Deleted in new
chr6_GL000253v2_alt	3457802	3458909	chr6_GL000253v2_alt:3457802-3458909	0	-	3457802	3457802	8553170	2	371,172,	0,935,
#Deleted in new
chr6_GL000253v2_alt	3457802	3459334	chr6_GL000253v2_alt:3457802-3459334	0	-	3457802	3457802	789624	3	371,100,96,	0,935,1436,
#Deleted in new
chr6_GL000253v2_alt	3457802	3459366	chr6_GL000253v2_alt:3457802-3459366	0	-	3457802	3457802	789624	3	371,100,77,	0,935,1487,
#Deleted in new
chr6_GL000253v2_alt	3458340	3459340	chr6_GL000253v2_alt:3458340-3459340	0	-	3458340	3458340	789624	3	320,71,102,	0,426,898,
#Deleted in new
chr6_GL000253v2_alt	3458385	3459327	chr6_GL000253v2_alt:3458385-3459327	0	-	3458385	3458385	789624	3	275,71,158,	0,381,784,
#Deleted in new
chr6_GL000253v2_alt	3458441	3460961	chr6_GL000253v2_alt:3458441-3460961	0	+	3459595	3460961	789624	6	196,209,191,154,96,108,	0,755,1146,1589,2229,2412,
#Deleted in new
chr6_GL000253v2_alt	3458523	3468662	chr6_GL000253v2_alt:3458523-3468662	1	+	3458627	3467934	0	9	114,191,154,96,108,84,85,55,872,	0,1064,1507,2147,2330,4096,4299,9028,9267,
#Deleted in new
chr6_GL000253v2_alt	3458542	3462832	chr6_GL000253v2_alt:3458542-3462832	0	+	3458542	3458542	8553170	6	95,191,96,108,84,10,	0,1045,2128,2311,4077,4280,
#Deleted in new
chr6_GL000253v2_alt	3458577	3468662	chr6_GL000253v2_alt:3458577-3468662	1	+	3459595	3467934	789624	10	60,406,191,154,96,108,84,85,55,872,	0,422,1010,1453,2093,2276,4042,4245,8974,9213,
#Deleted in new
chr6_GL000253v2_alt	3458845	3473262	chr6_GL000253v2_alt:3458845-3473262	0	+	3459595	3471183	0	16	560,191,154,96,108,84,85,55,79,483,110,96,171,80,154,369,	0,742,1185,1825,2008,3774,3977,8706,10717,12276,12839,13048,13225,13488,13641,14048,
#Deleted in new
chr6_GL000253v2_alt	3458999	3468664	chr6_GL000253v2_alt:3458999-3468664	1	+	3459595	3467934	789624	9	406,191,154,96,108,84,85,55,874,	0,588,1031,1671,1854,3620,3823,8552,8791,
#Deleted in new
chr6_GL000253v2_alt	3459095	3468662	chr6_GL000253v2_alt:3459095-3468662	1	+	3459595	3467934	789624	9	300,191,154,96,108,84,85,55,872,	0,492,935,1575,1758,3524,3727,8456,8695,
#Deleted in new
chr6_GL000253v2_alt	3459138	3468662	chr6_GL000253v2_alt:3459138-3468662	1	+	3459595	3467934	789624	9	109,191,154,96,108,84,85,55,872,	0,449,892,1532,1715,3481,3684,8413,8652,
#Deleted in new
chr6_GL000253v2_alt	3459167	3462907	chr6_GL000253v2_alt:3459167-3462907	0	+	3459595	3462907	789624	6	238,191,16,108,84,85,	0,420,1583,1686,3452,3655,
#Deleted in new
chr6_GL000253v2_alt	3459197	3467580	chr6_GL000253v2_alt:3459197-3467580	0	+	3459197	3459197	8553170	7	208,191,154,16,108,84,29,	0,390,833,1553,1656,3422,8354,
#Deleted in new
chr6_GL000253v2_alt	3459222	3476959	chr6_GL000253v2_alt:3459222-3476959	0	+	3459595	3471183	0	21	183,191,154,96,108,84,85,55,79,95,123,110,96,155,80,154,624,209,98,1143,256,	0,365,808,1448,1631,3397,3600,8329,10340,11899,12259,12462,12671,12864,13111,13264,13671,15051,15666,16173,17481,
#Deleted in new
chr6_GL000253v2_alt	3459466	3462679	chr6_GL000253v2_alt:3459466-3462679	0	+	3459595	3462679	789624	5	312,154,96,108,60,	0,564,1204,1387,3153,
#Deleted in new
chr6_GL000253v2_alt	3459478	3460766	chr6_GL000253v2_alt:3459478-3460766	0	+	3459595	3460766	789624	2	300,96,	0,1192,
#Deleted in new
chr6_GL000253v2_alt	3460018	3460742	chr6_GL000253v2_alt:3460018-3460742	0	+	3460018	3460018	8553170	2	166,72,	0,652,
#Deleted in new
chr6_GL000253v2_alt	3462093	3469639	chr6_GL000253v2_alt:3462093-3469639	0	+	3462093	3462093	8553170	4	610,85,55,77,	0,729,5458,7469,
#Deleted in new
chr6_GL000253v2_alt	3462472	3463305	chr6_GL000253v2_alt:3462472-3463305	0	+	3462472	3462472	8553170	2	231,483,	0,350,
#Deleted in new
chr6_GL000253v2_alt	3462625	3471989	chr6_GL000253v2_alt:3462625-3471989	2	+	3462625	3471183	789624	7	78,85,55,103,483,110,96,	0,197,4926,6937,8496,9059,9268,
#Deleted in new
chr6_GL000253v2_alt	3469588	3473262	chr6_GL000253v2_alt:3469588-3473262	3	+	3471149	3472940	789624	9	77,129,123,110,96,171,80,154,369,	0,1533,1893,2096,2305,2482,2745,2898,3305,
#Deleted in new
chr6_GL000253v2_alt	3469596	3473262	chr6_GL000253v2_alt:3469596-3473262	1	+	3471149	3472940	789624	9	45,129,123,110,96,171,80,154,369,	0,1525,1885,2088,2297,2474,2737,2890,3297,
#Deleted in new
chr6_GL000253v2_alt	3469643	3472640	chr6_GL000253v2_alt:3469643-3472640	0	+	3471149	3472640	789624	8	22,129,123,110,96,111,80,154,	0,1478,1838,2041,2250,2487,2690,2843,
#Deleted in new
chr6_GL000253v2_alt	3470219	3473262	chr6_GL000253v2_alt:3470219-3473262	0	+	3470219	3470219	8553170	6	1385,110,96,171,307,369,	0,1465,1674,1851,2114,2674,
#Deleted in new
chr6_GL000253v2_alt	3471176	3472153	chr6_GL000253v2_alt:3471176-3472153	0	+	3471176	3471176	8553170	4	40,123,110,260,	0,305,508,717,
#Deleted in new
chr6_GL000253v2_alt	3472526	3473262	chr6_GL000253v2_alt:3472526-3473262	0	+	3472526	3472526	8553170	2	83,369,	0,367,
#Deleted in new
chr6_GL000253v2_alt	3473192	3478096	chr6_GL000253v2_alt:3473192-3478096	1	-	3474256	3476477	789624	7	1237,73,96,176,134,209,178,	0,1754,1953,2213,2725,3085,4726,
#Deleted in new
chr6_GL000253v2_alt	3473192	3481103	chr6_GL000253v2_alt:3473192-3481103	1	-	3474256	3476477	789624	7	1237,73,96,176,134,209,309,	0,1754,1953,2213,2725,3085,7602,
#Deleted in new
chr6_GL000253v2_alt	3473192	3482061	chr6_GL000253v2_alt:3473192-3482061	1	-	3474256	3476477	789624	7	1237,73,96,176,134,209,571,	0,1754,1953,2213,2725,3085,8298,
#Deleted in new
chr6_GL000253v2_alt	3473192	3482767	chr6_GL000253v2_alt:3473192-3482767	1	-	3474256	3476477	789624	7	1237,73,96,176,134,209,243,	0,1754,1953,2213,2725,3085,9332,
#Deleted in new
chr6_GL000253v2_alt	3473192	3482306	chr6_GL000253v2_alt:3473192-3482306	1	-	3474256	3476477	789624	7	1237,73,96,176,134,209,92,	0,1754,1953,2213,2725,3085,9022,
#Deleted in new
chr6_GL000253v2_alt	3473192	3483077	chr6_GL000253v2_alt:3473192-3483077	3	-	3474256	3476477	789624	7	1237,73,96,176,134,209,96,	0,1754,1953,2213,2725,3085,9789,
#Deleted in new
chr6_GL000253v2_alt	3473192	3482323	chr6_GL000253v2_alt:3473192-3482323	0	-	3473192	3473192	8553170	5	1237,73,96,209,833,	0,1754,1953,3085,8298,
#Deleted in new
chr6_GL000253v2_alt	3475145	3480878	chr6_GL000253v2_alt:3475145-3480878	0	-	3475145	3475145	8553170	5	96,176,134,256,84,	0,260,772,1085,5649,
#Deleted in new
chr6_GL000253v2_alt	3483334	3485774	chr6_GL000253v2_alt:3483334-3485774	3	+	3483492	3485307	789624	6	298,19,113,55,118,565,	0,1187,1297,1523,1655,1875,
#Deleted in new
chr6_GL000253v2_alt	3483417	3484754	chr6_GL000253v2_alt:3483417-3484754	0	+	3483417	3483417	8553170	3	215,19,123,	0,1104,1214,
#Deleted in new
chr6_GL000253v2_alt	3485948	3489218	chr6_GL000253v2_alt:3485948-3489218	1	-	3486154	3489203	0	10	272,127,27,160,183,88,65,154,107,67,	0,383,638,1571,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000253v2_alt	3485948	3489227	chr6_GL000253v2_alt:3485948-3489227	1	-	3486533	3489203	0	10	272,109,142,131,183,88,65,196,107,76,	0,556,1279,1600,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000253v2_alt	3485948	3489305	chr6_GL000253v2_alt:3485948-3489305	3	-	3486123	3489203	0	11	272,127,27,142,131,183,88,65,196,107,154,	0,383,638,1279,1600,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000253v2_alt	3485948	3486616	chr6_GL000253v2_alt:3485948-3486616	0	-	3485948	3485948	8553170	2	272,285,	0,383,
#Deleted in new
chr6_GL000253v2_alt	3485948	3489227	chr6_GL000253v2_alt:3485948-3489227	0	-	3485948	3485948	789624	10	272,127,27,142,131,183,88,65,196,366,	0,383,638,1279,1600,1873,2146,2356,2587,2913,
#Deleted in new
chr6_GL000253v2_alt	3485948	3487912	chr6_GL000253v2_alt:3485948-3487912	0	-	3485948	3485948	8553170	4	272,109,142,364,	0,556,1279,1600,
#Deleted in new
chr6_GL000253v2_alt	3485948	3487912	chr6_GL000253v2_alt:3485948-3487912	0	-	3485948	3485948	8553170	5	272,127,27,142,364,	0,383,638,1279,1600,
#Deleted in new
chr6_GL000253v2_alt	3485948	3489303	chr6_GL000253v2_alt:3485948-3489303	1	-	3486123	3488587	789624	10	272,127,142,131,183,88,65,196,107,152,	0,383,1279,1600,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000253v2_alt	3485948	3489303	chr6_GL000253v2_alt:3485948-3489303	1	-	3486533	3489203	0	10	272,109,142,131,183,88,113,196,107,152,	0,556,1279,1600,1873,2146,2308,2587,2913,3203,
#Deleted in new
chr6_GL000253v2_alt	3485948	3489303	chr6_GL000253v2_alt:3485948-3489303	1	-	3486123	3489203	0	11	272,127,27,142,131,183,88,113,196,107,152,	0,383,638,1279,1600,1873,2146,2308,2587,2913,3203,
#Deleted in new
chr6_GL000253v2_alt	3485948	3489303	chr6_GL000253v2_alt:3485948-3489303	1	-	3486123	3489203	789624	5	272,83,123,107,152,	0,383,2660,2913,3203,
#Deleted in new
chr6_GL000253v2_alt	3486123	3489203	chr6_GL000253v2_alt:3486123-3489203	1	-	3486123	3487557	789624	8	97,127,27,142,131,59,30,52,	0,208,463,1104,1425,1698,2815,3028,
#Deleted in new
chr6_GL000253v2_alt	3487848	3489216	chr6_GL000253v2_alt:3487848-3489216	0	-	3487848	3489203	789624	6	156,88,117,183,107,65,	0,246,456,700,1013,1303,
#Deleted in new
chr6_GL000253v2_alt	3487860	3489218	chr6_GL000253v2_alt:3487860-3489218	0	-	3487860	3489203	789624	6	144,88,113,196,107,67,	0,234,396,675,1001,1291,
#Deleted in new
chr6_GL000253v2_alt	3488389	3489303	chr6_GL000253v2_alt:3488389-3489303	1	-	3488389	3489203	789624	4	32,196,107,152,	0,146,472,762,
#Deleted in new
chr6_GL000253v2_alt	3489721	3495164	chr6_GL000253v2_alt:3489721-3495164	3	-	3491359	3494893	789624	9	1731,87,89,154,136,191,248,74,492,	0,1860,2069,2498,2903,3222,3513,3979,4951,
#Deleted in new
chr6_GL000253v2_alt	3491233	3492493	chr6_GL000253v2_alt:3491233-3492493	0	-	3491233	3491233	8553170	2	646,274,	0,986,
#Deleted in new
chr6_GL000253v2_alt	3491950	3494920	chr6_GL000253v2_alt:3491950-3494920	0	-	3491950	3491950	8553170	6	423,136,191,248,74,248,	0,674,993,1284,1750,2722,
#Deleted in new
chr6_GL000253v2_alt	3492210	3493794	chr6_GL000253v2_alt:3492210-3493794	0	-	3492210	3492210	8553170	4	163,136,191,560,	0,414,733,1024,
#Deleted in new
chr6_GL000253v2_alt	3493257	3494055	chr6_GL000253v2_alt:3493257-3494055	0	-	3493257	3493257	8553170	2	225,355,	0,443,
#Deleted in new
chr6_GL000253v2_alt	3495743	3497884	chr6_GL000253v2_alt:3495743-3497884	1	-	3496343	3497491	789624	4	738,200,103,435,	0,943,1382,1706,
#Deleted in new
chr6_GL000253v2_alt	3495743	3500501	chr6_GL000253v2_alt:3495743-3500501	3	-	3496343	3497491	789624	8	738,200,103,59,84,81,93,98,	0,943,1382,1706,2275,3544,3971,4660,
#Deleted in new
chr6_GL000253v2_alt	3495743	3497863	chr6_GL000253v2_alt:3495743-3497863	0	-	3496843	3497491	789624	4	738,162,103,414,	0,943,1382,1706,
#Deleted in new
chr6_GL000253v2_alt	3495743	3497846	chr6_GL000253v2_alt:3495743-3497846	1	-	3496343	3497460	789624	4	738,200,125,397,	0,943,1382,1706,
#Deleted in new
chr6_GL000253v2_alt	3495744	3498096	chr6_GL000253v2_alt:3495744-3498096	1	-	3496751	3498096	789624	5	737,200,103,59,78,	0,942,1381,1705,2274,
#Deleted in new
chr6_GL000253v2_alt	3499820	3529069	chr6_GL000253v2_alt:3499820-3529069	3	-	3500414	3528930	789624	30	1308,98,148,296,139,82,220,176,384,524,113,253,185,154,88,118,153,146,160,123,114,114,195,156,237,123,348,296,82,209,	0,1481,2082,2456,3578,3806,4083,5993,6279,7238,8932,9299,15914,17637,17987,18298,18851,19273,20420,22132,22340,23182,24779,25316,25592,25943,26165,27695,28189,29040,
#Deleted in new
chr6_GL000253v2_alt	3499820	3509153	chr6_GL000253v2_alt:3499820-3509153	0	-	3499820	3499820	8553170	10	1308,98,148,296,139,82,220,176,2766,34,	0,1481,2082,2456,3578,3806,4083,5993,6279,9299,
#Deleted in new
chr6_GL000253v2_alt	3499820	3501955	chr6_GL000253v2_alt:3499820-3501955	0	-	3499820	3499820	8553170	2	1579,53,	0,2082,
#Deleted in new
chr6_GL000253v2_alt	3515908	3519221	chr6_GL000253v2_alt:3515908-3519221	0	-	3515908	3515908	8553170	5	11,154,118,153,128,	0,1549,2210,2763,3185,
#Deleted in new
chr6_GL000253v2_alt	3520869	3529059	chr6_GL000253v2_alt:3520869-3529059	0	-	3520869	3520869	8553170	11	1206,114,114,195,156,237,123,348,296,82,199,	0,1291,2133,3730,4267,4543,4894,5116,6646,7140,7991,
#Deleted in new
chr6_GL000253v2_alt	3597690	3676875	chr6_GL000253v2_alt:3597690-3676875	1	-	3597973	3676702	789624	23	1338,15,21,21,21,21,24,21,21,21,21,21,21,39,90,21,21,21,30,33,33,87,186,	0,7223,7981,9910,29791,30422,30896,37894,39343,42746,43221,43924,46289,46910,57053,62437,62962,73478,73584,75234,76091,77207,78999,
#Deleted in new
chr6_GL000253v2_alt	3597690	3676903	chr6_GL000253v2_alt:3597690-3676903	1	-	3597973	3676702	789624	26	1338,15,21,21,21,21,21,24,24,21,21,21,21,21,21,39,21,21,21,21,21,30,33,33,87,214,	0,7223,7981,9910,23700,29791,30422,30896,31961,37894,39343,42746,43221,43924,46289,46910,50548,57053,62437,62962,73478,73584,75234,76091,77207,78999,
#Deleted in new
chr6_GL000253v2_alt	3597692	3676908	chr6_GL000253v2_alt:3597692-3676908	1	-	3597973	3676702	789624	26	1336,15,21,21,21,21,21,21,24,21,21,21,21,21,21,39,21,21,21,21,21,30,33,33,87,219,	0,7221,7979,9908,23076,23698,29789,30420,30894,37892,39341,42744,43219,43922,46287,46908,50546,57051,62435,62960,73476,73582,75232,76089,77205,78997,
#Deleted in new
chr6_GL000253v2_alt	3597692	3676908	chr6_GL000253v2_alt:3597692-3676908	1	-	3597973	3676702	789624	24	1336,15,21,21,21,21,21,24,21,21,21,21,21,21,39,21,21,21,21,30,33,33,87,219,	0,7221,7979,9908,23698,29789,30420,30894,37892,39341,42744,43219,43922,46287,46908,50546,57051,62435,62960,73582,75232,76089,77205,78997,
#Deleted in new
chr6_GL000253v2_alt	3597692	3676908	chr6_GL000253v2_alt:3597692-3676908	3	-	3597973	3676702	789624	23	1336,15,21,21,21,21,24,21,21,21,21,21,21,39,90,21,21,21,30,33,33,87,219,	0,7221,7979,9908,23076,30420,30894,37892,39341,42744,43219,43922,46287,46908,57051,62435,62960,73476,73582,75232,76089,77205,78997,
#Deleted in new
chr6_GL000253v2_alt	3597707	3676875	chr6_GL000253v2_alt:3597707-3676875	1	-	3597973	3676702	789624	23	1321,15,21,21,21,21,24,21,21,21,21,21,21,39,90,21,16,16,34,33,33,87,186,	0,7206,7964,9893,29774,30405,30879,37877,39326,42729,43204,43907,46272,46893,57036,62420,62945,62963,73563,75217,76074,77190,78982,
#Deleted in new
chr6_GL000253v2_alt	3597948	3676908	chr6_GL000253v2_alt:3597948-3676908	1	-	3597948	3676702	789624	33	69,636,69,296,15,21,21,21,21,21,18,5,24,11,6,21,21,23,21,21,39,21,21,21,17,5,21,9,17,33,33,87,219,	0,73,713,784,6965,7723,9652,23442,29533,30164,30640,30907,31703,37636,37651,39085,42488,42963,43666,46031,46652,50290,56795,62179,62704,63896,73220,73326,73339,74976,75833,76949,78741,
#Deleted in new
chr6_GL000253v2_alt	3630214	3631174	chr6_GL000253v2_alt:3630214-3631174	7	+	3630214	3630214	16724991	1	960,	0,
#Deleted in new
chr6_GL000253v2_alt	3657880	3657987	chr6_GL000253v2_alt:3657880-3657987	3	+	3657880	3657880	8553170	1	107,	0,
#Deleted in new
chr6_GL000253v2_alt	3695501	3698679	chr6_GL000253v2_alt:3695501-3698679	3	+	3695501	3695501	789624	3	245,128,238,	0,1104,2940,
#Deleted in new
chr6_GL000253v2_alt	3698955	3712147	chr6_GL000253v2_alt:3698955-3712147	3	-	3698961	3712140	789624	7	95,282,348,21,282,348,86,	0,781,2076,7845,8995,10999,13106,
#Deleted in new
chr6_GL000253v2_alt	3699728	3712140	chr6_GL000253v2_alt:3699728-3712140	0	-	3706805	3712140	789624	5	290,344,21,112,79,	0,1307,7072,10462,12333,
#Deleted in new
chr6_GL000253v2_alt	3699728	3712140	chr6_GL000253v2_alt:3699728-3712140	1	-	3699728	3701278	789624	5	290,348,21,107,79,	0,1303,7072,10467,12333,
#Deleted in new
chr6_GL000253v2_alt	3699728	3712140	chr6_GL000253v2_alt:3699728-3712140	1	-	3699728	3712140	789624	6	290,348,21,282,348,79,	0,1303,7072,8222,10226,12333,
#Deleted in new
chr6_GL000253v2_alt	3699728	3712140	chr6_GL000253v2_alt:3699728-3712140	1	-	3699728	3712140	789624	4	290,348,21,79,	0,1303,7072,12333,
#Deleted in new
chr6_GL000253v2_alt	3710052	3712147	chr6_GL000253v2_alt:3710052-3712147	0	-	3710052	3712140	789624	2	247,86,	0,2009,
#Deleted in new
chr6_GL000253v2_alt	3744058	3749270	chr6_GL000253v2_alt:3744058-3749270	3	+	3744167	3748126	0	5	191,246,282,166,395,	0,2605,3342,3913,4817,
#Deleted in new
chr6_GL000253v2_alt	3744088	3747413	chr6_GL000253v2_alt:3744088-3747413	0	+	3744088	3744088	8553170	3	161,117,13,	0,2704,3312,
#Deleted in new
chr6_GL000253v2_alt	3744140	3749270	chr6_GL000253v2_alt:3744140-3749270	1	+	3744167	3748126	789624	5	109,246,207,166,395,	0,2523,3335,3831,4735,
#Deleted in new
chr6_GL000253v2_alt	3764072	3777729	chr6_GL000253v2_alt:3764072-3777729	7	-	3764072	3764072	16724991	2	267,76,	0,13581,
#Deleted in new
chr6_GL000253v2_alt	3789960	3790056	chr6_GL000253v2_alt:3789960-3790056	7	-	3789960	3789960	16724991	1	96,	0,
#Deleted in new
chr6_GL000253v2_alt	3815535	3815683	chr6_GL000253v2_alt:3815535-3815683	3	-	3815535	3815535	8553170	1	148,	0,
#Deleted in new
chr6_GL000253v2_alt	3820958	3821054	chr6_GL000253v2_alt:3820958-3821054	7	-	3820958	3820958	16724991	1	96,	0,
#Deleted in new
chr6_GL000253v2_alt	3837656	3837800	chr6_GL000253v2_alt:3837656-3837800	3	-	3837656	3837656	8553170	1	144,	0,
#Deleted in new
chr6_GL000253v2_alt	3840438	3855387	chr6_GL000253v2_alt:3840438-3855387	3	-	3840746	3855324	789624	6	322,24,111,282,270,163,	0,624,1122,1937,4960,14786,
#Deleted in new
chr6_GL000253v2_alt	3877083	3877231	chr6_GL000253v2_alt:3877083-3877231	3	-	3877083	3877083	8553170	1	148,	0,
#Deleted in new
chr6_GL000253v2_alt	3887009	3889471	chr6_GL000253v2_alt:3887009-3889471	7	-	3887009	3887009	16724991	4	58,24,111,162,	0,678,1491,2300,
#Deleted in new
chr6_GL000253v2_alt	3938044	3938208	chr6_GL000253v2_alt:3938044-3938208	3	-	3938044	3938044	8553170	1	164,	0,
#Deleted in new
chr6_GL000253v2_alt	3940252	3941192	chr6_GL000253v2_alt:3940252-3941192	7	+	3940252	3940252	16724991	1	940,	0,
#Deleted in new
chr6_GL000253v2_alt	3942698	3943106	chr6_GL000253v2_alt:3942698-3943106	7	-	3942698	3942698	16724991	1	408,	0,
#Deleted in new
chr6_GL000253v2_alt	3945425	3964587	chr6_GL000253v2_alt:3945425-3964587	7	-	3945425	3945425	16724991	5	26,111,284,264,100,	0,799,1612,9989,19062,
#Deleted in new
chr6_GL000253v2_alt	3948260	3949391	chr6_GL000253v2_alt:3948260-3949391	7	+	3948260	3948260	16724991	1	1131,	0,
#Deleted in new
chr6_GL000253v2_alt	3986409	3986558	chr6_GL000253v2_alt:3986409-3986558	3	-	3986409	3986409	8553170	1	149,	0,
#Deleted in new
chr6_GL000253v2_alt	3988942	4004557	chr6_GL000253v2_alt:3988942-4004557	3	-	3989269	4004450	789624	6	341,24,111,282,270,207,	0,1055,1554,2361,4857,15408,
#Deleted in new
chr6_GL000253v2_alt	3991307	4023043	chr6_GL000253v2_alt:3991307-4023043	0	-	3991307	4023043	789624	4	278,270,151,50,	0,2492,29790,31686,
#Deleted in new
chr6_GL000253v2_alt	4046500	4055848	chr6_GL000253v2_alt:4046500-4055848	0	+	4055775	4055848	789624	4	92,151,166,111,	0,3753,4555,9237,
#Deleted in new
chr6_GL000253v2_alt	4055673	4061884	chr6_GL000253v2_alt:4055673-4061884	1	+	4055775	4060998	789624	5	184,246,282,175,707,	0,3878,4536,5170,5504,
#Deleted in new
chr6_GL000253v2_alt	4055673	4061884	chr6_GL000253v2_alt:4055673-4061884	3	+	4055775	4060998	789624	5	184,246,282,175,495,	0,3878,4536,5170,5716,
#Deleted in new
chr6_GL000253v2_alt	4055717	4061884	chr6_GL000253v2_alt:4055717-4061884	1	+	4055775	4060998	789624	5	140,246,282,175,360,	0,3834,4492,5126,5807,
#Deleted in new
chr6_GL000253v2_alt	4055722	4061207	chr6_GL000253v2_alt:4055722-4061207	0	+	4055722	4055722	8553170	4	135,246,282,30,	0,3829,4487,5455,
#Deleted in new
chr6_GL000253v2_alt	4055736	4061243	chr6_GL000253v2_alt:4055736-4061243	1	+	4055775	4060998	789624	4	121,246,282,400,	0,3815,4473,5107,
#Deleted in new
chr6_GL000253v2_alt	4055740	4060478	chr6_GL000253v2_alt:4055740-4060478	0	+	4055740	4055740	8553170	3	117,246,367,	0,3811,4371,
#Deleted in new
chr6_GL000253v2_alt	4055743	4061504	chr6_GL000253v2_alt:4055743-4061504	0	+	4055775	4057470	789624	6	114,956,246,282,175,327,	0,1461,3808,4466,5100,5434,
#Deleted in new
chr6_GL000253v2_alt	4055747	4068866	chr6_GL000253v2_alt:4055747-4068866	0	+	4055747	4055747	8553170	3	110,246,8657,	0,3804,4462,
#Deleted in new
chr6_GL000253v2_alt	4059551	4061504	chr6_GL000253v2_alt:4059551-4061504	0	+	4059551	4059551	8553170	3	246,282,115,	0,658,1838,
#Deleted in new
chr6_GL000253v2_alt	4076916	4084470	chr6_GL000253v2_alt:4076916-4084470	1	-	4077686	4084432	789624	4	784,282,270,147,	0,2531,5699,7407,
#Deleted in new
chr6_GL000253v2_alt	4076916	4084516	chr6_GL000253v2_alt:4076916-4084516	1	-	4077686	4084432	0	5	784,111,282,270,193,	0,1904,2531,5699,7407,
#Deleted in new
chr6_GL000253v2_alt	4076916	4084639	chr6_GL000253v2_alt:4076916-4084639	1	-	4077686	4084432	789624	6	784,24,111,282,270,316,	0,1395,1904,2531,5699,7407,
#Deleted in new
chr6_GL000253v2_alt	4076916	4086211	chr6_GL000253v2_alt:4076916-4086211	3	-	4077686	4084432	0	6	784,111,282,270,169,116,	0,1904,2531,5699,7407,9179,
#Deleted in new
chr6_GL000253v2_alt	4076916	4084474	chr6_GL000253v2_alt:4076916-4084474	1	-	4077686	4084432	789624	3	784,282,151,	0,2531,7407,
#Deleted in new
chr6_GL000253v2_alt	4076916	4084460	chr6_GL000253v2_alt:4076916-4084460	0	-	4079534	4084432	789624	5	784,111,119,270,137,	0,1904,2531,5699,7407,
#Deleted in new
chr6_GL000253v2_alt	4076916	4084460	chr6_GL000253v2_alt:4076916-4084460	0	-	4076916	4076916	8553170	3	784,4065,137,	0,1904,7407,
#Deleted in new
chr6_GL000253v2_alt	4077329	4078181	chr6_GL000253v2_alt:4077329-4078181	3	+	4077329	4077329	8553170	2	177,376,	0,476,
#Deleted in new
chr6_GL000253v2_alt	4077335	4079931	chr6_GL000253v2_alt:4077335-4079931	3	-	4077335	4077335	8553170	2	213,97,	0,2499,
#Deleted in new
chr6_GL000253v2_alt	4077335	4077891	chr6_GL000253v2_alt:4077335-4077891	0	-	4077335	4077335	8553170	2	365,64,	0,492,
#Deleted in new
chr6_GL000253v2_alt	4079482	4084479	chr6_GL000253v2_alt:4079482-4084479	0	-	4079482	4084432	789624	3	247,136,98,	0,3133,4899,
#Deleted in new
chr6_GL000253v2_alt	4125931	4126762	chr6_GL000253v2_alt:4125931-4126762	7	-	4125931	4125931	16724991	1	831,	0,
#Deleted in new
chr6_GL000253v2_alt	4137307	4138130	chr6_GL000253v2_alt:4137307-4138130	0	+	4137307	4137307	8553170	2	143,238,	0,585,
#Deleted in new
chr6_GL000253v2_alt	4137332	4138135	chr6_GL000253v2_alt:4137332-4138135	3	+	4137332	4137332	8553170	3	118,35,243,	0,376,560,
#Deleted in new
chr6_GL000253v2_alt	4137687	4138138	chr6_GL000253v2_alt:4137687-4138138	0	+	4137687	4137687	8553170	2	56,246,	0,205,
#Deleted in new
chr6_GL000253v2_alt	4150063	4151000	chr6_GL000253v2_alt:4150063-4151000	7	-	4150063	4150063	16724991	2	80,276,	0,661,
#Deleted in new
chr6_GL000253v2_alt	4160656	4166218	chr6_GL000253v2_alt:4160656-4166218	3	+	4160758	4165720	789624	5	184,249,282,175,311,	0,3828,4460,4909,5251,
#Deleted in new
chr6_GL000253v2_alt	4175449	4182887	chr6_GL000253v2_alt:4175449-4182887	1	-	4176587	4182837	789624	5	1209,111,282,267,159,	0,1678,2756,5565,7279,
#Deleted in new
chr6_GL000253v2_alt	4175449	4182845	chr6_GL000253v2_alt:4175449-4182845	1	-	4175804	4182837	789624	5	369,24,282,267,117,	0,1185,2756,5565,7279,
#Deleted in new
chr6_GL000253v2_alt	4175449	4182889	chr6_GL000253v2_alt:4175449-4182889	3	-	4175804	4182837	789624	6	369,24,111,282,267,161,	0,1185,1678,2756,5565,7279,
#Deleted in new
chr6_GL000253v2_alt	4175739	4182821	chr6_GL000253v2_alt:4175739-4182821	0	-	4175804	4182821	789624	4	79,282,267,93,	0,2466,5275,6989,
#Deleted in new
chr6_GL000253v2_alt	4241185	4258081	chr6_GL000253v2_alt:4241185-4258081	3	-	4241641	4257585	0	12	486,137,160,174,189,129,198,206,131,115,497,75,	0,7566,8096,8433,8784,10499,10793,13320,13809,15703,15907,16821,
#Deleted in new
chr6_GL000253v2_alt	4244761	4258124	chr6_GL000253v2_alt:4244761-4258124	1	-	4248206	4257585	789624	13	3496,126,137,160,174,189,129,198,206,131,115,497,118,	0,3499,3990,4520,4857,5208,6923,7217,9744,10233,12127,12331,13245,
#Deleted in new
chr6_GL000253v2_alt	4244766	4258134	chr6_GL000253v2_alt:4244766-4258134	1	-	4248257	4257585	0	12	3620,137,160,174,189,129,198,206,131,115,497,128,	0,3985,4515,4852,5203,6918,7212,9739,10228,12122,12326,13240,
#Deleted in new
chr6_GL000253v2_alt	4248295	4250079	chr6_GL000253v2_alt:4248295-4250079	0	-	4248295	4248295	8553170	4	91,137,160,461,	0,456,986,1323,
#Deleted in new
chr6_GL000253v2_alt	4251646	4252085	chr6_GL000253v2_alt:4251646-4252085	0	-	4251646	4251646	8553170	2	167,107,	0,332,
#Deleted in new
chr6_GL000253v2_alt	4260069	4263400	chr6_GL000253v2_alt:4260069-4263400	1	-	4260311	4263349	0	6	331,205,130,112,148,198,	0,814,1417,1955,2225,3133,
#Deleted in new
chr6_GL000253v2_alt	4260069	4263373	chr6_GL000253v2_alt:4260069-4263373	1	-	4260311	4263349	789624	6	331,205,130,40,148,171,	0,814,1417,1955,2225,3133,
#Deleted in new
chr6_GL000253v2_alt	4260069	4264056	chr6_GL000253v2_alt:4260069-4264056	3	-	4260311	4263766	0	6	331,205,130,112,148,425,	0,814,1417,1955,2225,3562,
#Deleted in new
chr6_GL000253v2_alt	4260069	4261387	chr6_GL000253v2_alt:4260069-4261387	0	-	4260069	4260069	8553170	2	331,504,	0,814,
#Deleted in new
chr6_GL000253v2_alt	4260373	4264004	chr6_GL000253v2_alt:4260373-4264004	0	-	4260373	4260373	8553170	5	27,205,130,418,373,	0,510,1113,1651,3258,
#Deleted in new
chr6_GL000253v2_alt	4263438	4265848	chr6_GL000253v2_alt:4263438-4265848	3	+	4263438	4263438	789624	2	189,1078,	0,1332,
#Deleted in new
chr6_GL000253v2_alt	4263460	4265172	chr6_GL000253v2_alt:4263460-4265172	0	+	4263460	4263460	8553170	3	167,301,490,	0,462,1222,
#Deleted in new
chr6_GL000253v2_alt	4263485	4265339	chr6_GL000253v2_alt:4263485-4265339	0	+	4263485	4263485	789624	3	142,226,569,	0,512,1285,
#Deleted in new
chr6_GL000253v2_alt	4263485	4265563	chr6_GL000253v2_alt:4263485-4265563	0	+	4263485	4263485	789624	3	142,61,793,	0,677,1285,
#Deleted in new
chr6_GL000253v2_alt	4263486	4265048	chr6_GL000253v2_alt:4263486-4265048	0	+	4263486	4263486	8553170	2	737,278,	0,1284,
#Deleted in new
chr6_GL000253v2_alt	4263488	4278939	chr6_GL000253v2_alt:4263488-4278939	1	+	4275499	4278886	789624	6	139,68,132,130,142,181,	0,12002,13128,13870,14229,15270,
#Deleted in new
chr6_GL000253v2_alt	4263490	4265431	chr6_GL000253v2_alt:4263490-4265431	0	+	4263490	4263490	8553170	2	137,749,	0,1192,
#Deleted in new
chr6_GL000253v2_alt	4264188	4277791	chr6_GL000253v2_alt:4264188-4277791	0	+	4275499	4277791	789624	5	35,68,132,130,74,	0,11302,12428,13170,13529,
#Deleted in new
chr6_GL000253v2_alt	4264561	4273331	chr6_GL000253v2_alt:4264561-4273331	3	-	4264931	4273169	0	11	577,137,163,174,189,129,198,206,131,115,940,	0,1859,2304,2710,3443,3781,5111,5735,6900,7179,7830,
#Deleted in new
chr6_GL000253v2_alt	4264561	4269495	chr6_GL000253v2_alt:4264561-4269495	0	-	4264561	4264561	8553170	5	577,137,163,174,1491,	0,1859,2304,2710,3443,
#Deleted in new
chr6_GL000253v2_alt	4265027	4267583	chr6_GL000253v2_alt:4265027-4267583	0	-	4265027	4265027	8553170	3	111,608,312,	0,1393,2244,
#Deleted in new
chr6_GL000253v2_alt	4273500	4278254	chr6_GL000253v2_alt:4273500-4278254	0	+	4273500	4273500	8553170	3	142,1998,537,	0,1990,4217,
#Deleted in new
chr6_GL000253v2_alt	4273513	4278939	chr6_GL000253v2_alt:4273513-4278939	1	+	4273582	4278886	0	6	129,68,132,130,142,181,	0,1977,3103,3845,4204,5245,
#Deleted in new
chr6_GL000253v2_alt	4273580	4298940	chr6_GL000253v2_alt:4273580-4298940	3	+	4273582	4298839	789624	6	62,68,130,142,93,145,	0,1910,3778,4137,22823,25215,
#Deleted in new
chr6_GL000253v2_alt	4275449	4278076	chr6_GL000253v2_alt:4275449-4278076	0	+	4275449	4275449	8553170	4	109,132,130,359,	0,1167,1909,2268,
#Deleted in new
chr6_GL000253v2_alt	4298523	4299201	chr6_GL000253v2_alt:4298523-4299201	7	-	4298523	4298523	16724991	1	678,	0,
#Deleted in new
chr6_GL000253v2_alt	4298568	4299186	chr6_GL000253v2_alt:4298568-4299186	5	-	4298568	4298568	16724991	1	618,	0,
#Deleted in new
chr6_GL000253v2_alt	4315764	4315839	chr6_GL000253v2_alt:4315764-4315839	7	+	4315764	4315764	16724991	1	75,	0,
#Deleted in new
chr6_GL000253v2_alt	4353996	4358056	chr6_GL000253v2_alt:4353996-4358056	0	-	4354338	4358056	789624	4	359,117,285,5,	0,907,2543,4055,
#Deleted in new
chr6_GL000253v2_alt	4353996	4356807	chr6_GL000253v2_alt:4353996-4356807	0	-	4354338	4356807	789624	3	359,36,268,	0,713,2543,
#Deleted in new
chr6_GL000253v2_alt	4353996	4360438	chr6_GL000253v2_alt:4353996-4360438	3	-	4354338	4360175	0	6	359,36,117,285,282,318,	0,713,907,2543,4055,6124,
#Deleted in new
chr6_GL000253v2_alt	4353996	4360389	chr6_GL000253v2_alt:4353996-4360389	1	-	4354355	4360175	789624	5	390,121,285,282,269,	0,903,2543,4055,6124,
#Deleted in new
chr6_GL000253v2_alt	4353996	4356269	chr6_GL000253v2_alt:4353996-4356269	0	-	4353996	4353996	8553170	2	359,1560,	0,713,
#Deleted in new
chr6_GL000253v2_alt	4353996	4356254	chr6_GL000253v2_alt:4353996-4356254	0	-	4353996	4353996	8553170	3	359,36,1351,	0,713,907,
#Deleted in new
chr6_GL000253v2_alt	4353996	4360352	chr6_GL000253v2_alt:4353996-4360352	0	-	4353996	4353996	8553170	2	4337,232,	0,6124,
#Deleted in new
chr6_GL000253v2_alt	4356731	4372491	chr6_GL000253v2_alt:4356731-4372491	0	-	4356731	4372405	789624	4	93,282,63,174,	0,1320,3389,15586,
#Deleted in new
chr6_GL000253v2_alt	4367980	4372430	chr6_GL000253v2_alt:4367980-4372430	1	-	4368234	4372405	789624	4	259,129,279,113,	0,661,1001,4337,
#Deleted in new
chr6_GL000253v2_alt	4367980	4372477	chr6_GL000253v2_alt:4367980-4372477	1	-	4368234	4372405	789624	5	259,129,177,285,160,	0,661,1001,1909,4337,
#Deleted in new
chr6_GL000253v2_alt	4367980	4372491	chr6_GL000253v2_alt:4367980-4372491	3	-	4368234	4372405	0	5	259,129,279,285,174,	0,661,1001,1909,4337,
#Deleted in new
chr6_GL000253v2_alt	4367980	4372477	chr6_GL000253v2_alt:4367980-4372477	0	-	4367980	4367980	8553170	4	259,126,1193,160,	0,664,1001,4337,
#Deleted in new
chr6_GL000253v2_alt	4367980	4369042	chr6_GL000253v2_alt:4367980-4369042	0	-	4367980	4367980	8553170	2	259,401,	0,661,
#Deleted in new
chr6_GL000253v2_alt	4368108	4390100	chr6_GL000253v2_alt:4368108-4390100	0	-	4368108	4368108	8553170	5	131,129,15,285,138,	0,533,873,1781,21854,
#Deleted in new
chr6_GL000253v2_alt	4368141	4387828	chr6_GL000253v2_alt:4368141-4387828	0	-	4368141	4368141	8553170	4	98,129,279,300,	0,500,840,19387,
#Deleted in new
chr6_GL000253v2_alt	4368641	4371830	chr6_GL000253v2_alt:4368641-4371830	0	-	4368641	4371830	789624	4	129,279,285,178,	0,340,1248,3011,
#Deleted in new
chr6_GL000253v2_alt	4369027	4388478	chr6_GL000253v2_alt:4369027-4388478	0	-	4369027	4370163	789624	3	233,285,93,	0,862,19358,
#Deleted in new
chr6_GL000253v2_alt	4369454	4372403	chr6_GL000253v2_alt:4369454-4372403	0	-	4369454	4369454	8553170	3	720,178,86,	0,2198,2863,
#Deleted in new
chr6_GL000253v2_alt	4388043	4400883	chr6_GL000253v2_alt:4388043-4400883	1	+	4392282	4400096	0	13	397,1333,304,138,139,215,375,129,249,263,305,123,924,	0,2935,5802,6720,7366,7586,7898,8778,9093,9462,11162,11676,11916,
#Deleted in new
chr6_GL000253v2_alt	4388641	4391525	chr6_GL000253v2_alt:4388641-4391525	0	+	4388641	4388641	8553170	2	95,547,	0,2337,
#Deleted in new
chr6_GL000253v2_alt	4388702	4395998	chr6_GL000253v2_alt:4388702-4395998	2	+	4388702	4395998	789624	6	34,304,138,139,215,57,	0,5143,6061,6707,6927,7239,
#Deleted in new
chr6_GL000253v2_alt	4389686	4390201	chr6_GL000253v2_alt:4389686-4390201	3	+	4389686	4389686	8553170	2	131,67,	0,448,
#Deleted in new
chr6_GL000253v2_alt	4390271	4400883	chr6_GL000253v2_alt:4390271-4400883	1	+	4392282	4400096	0	13	310,1333,304,138,139,215,375,129,249,263,305,123,924,	0,707,3574,4492,5138,5358,5670,6550,6865,7234,8934,9448,9688,
#Deleted in new
chr6_GL000253v2_alt	4390313	4397577	chr6_GL000253v2_alt:4390313-4397577	0	+	4390313	4390313	8553170	10	268,1333,304,138,139,215,375,311,249,72,	0,665,3532,4450,5096,5316,5628,6326,6823,7192,
#Deleted in new
chr6_GL000253v2_alt	4390336	4400883	chr6_GL000253v2_alt:4390336-4400883	0	+	4392282	4394782	789624	14	245,1333,304,92,138,139,215,375,129,249,263,305,123,924,	0,642,3509,4068,4427,5073,5293,5605,6485,6800,7169,8869,9383,9623,
#Deleted in new
chr6_GL000253v2_alt	4392113	4400883	chr6_GL000253v2_alt:4392113-4400883	1	+	4392282	4400096	789624	13	198,304,138,139,215,375,129,249,263,105,305,123,924,	0,1732,2650,3296,3516,3828,4708,5023,5392,6352,7092,7606,7846,
#Deleted in new
chr6_GL000253v2_alt	4392467	4400883	chr6_GL000253v2_alt:4392467-4400883	0	+	4392467	4400096	789624	12	46,304,138,139,215,375,129,249,263,305,123,924,	0,1378,2296,2942,3162,3474,4354,4669,5038,6738,7252,7492,
#Deleted in new
chr6_GL000253v2_alt	4395520	4397594	chr6_GL000253v2_alt:4395520-4397594	0	+	4395520	4395520	8553170	5	28,215,1009,249,89,	0,109,421,1616,1985,
#Deleted in new
chr6_GL000253v2_alt	4395948	4397281	chr6_GL000253v2_alt:4395948-4397281	0	+	4395948	4395948	8553170	3	368,154,145,	0,848,1188,
#Deleted in new
chr6_GL000253v2_alt	4396929	4398181	chr6_GL000253v2_alt:4396929-4398181	0	+	4396929	4396929	8553170	3	21,249,676,	0,207,576,
#Deleted in new
chr6_GL000253v2_alt	4398917	4400664	chr6_GL000253v2_alt:4398917-4400664	0	+	4398917	4398917	8553170	2	925,705,	0,1042,
#Deleted in new
chr6_GL000253v2_alt	4399059	4400144	chr6_GL000253v2_alt:4399059-4400144	0	+	4399059	4399059	8553170	3	451,123,185,	0,660,900,
#Deleted in new
chr6_GL000253v2_alt	4423526	4428960	chr6_GL000253v2_alt:4423526-4428960	3	-	4426185	4428884	0	5	2663,136,282,249,158,	0,2901,3132,3834,5276,
#Deleted in new
chr6_GL000253v2_alt	4425954	4426732	chr6_GL000253v2_alt:4425954-4426732	0	-	4425954	4425954	8553170	3	235,136,31,	0,473,747,
#Deleted in new
chr6_GL000253v2_alt	4426148	4427402	chr6_GL000253v2_alt:4426148-4427402	0	-	4426148	4426148	8553170	3	41,513,42,	0,279,1212,
#Deleted in new
chr6_GL000253v2_alt	4426792	4427472	chr6_GL000253v2_alt:4426792-4427472	0	-	4426792	4426792	8553170	2	433,112,	0,568,
#Deleted in new
chr6_GL000253v2_alt	4426844	4428927	chr6_GL000253v2_alt:4426844-4428927	0	-	4426844	4428884	789624	3	96,82,125,	0,516,1958,
#Deleted in new
chr6_GL000253v2_alt	4427408	4428930	chr6_GL000253v2_alt:4427408-4428930	0	-	4427408	4427408	8553170	2	344,128,	0,1394,
#Deleted in new
chr6_GL000253v2_alt	4484265	4500413	chr6_GL000253v2_alt:4484265-4500413	3	-	4488346	4493267	0	6	779,167,282,246,199,31,	0,4069,4450,5072,8902,16117,
#Deleted in new
chr6_GL000253v2_alt	4484703	4493312	chr6_GL000253v2_alt:4484703-4493312	0	-	4484703	4484703	8553170	2	4880,145,	0,8464,
#Deleted in new
chr6_GL000253v2_alt	4487356	4488945	chr6_GL000253v2_alt:4487356-4488945	0	-	4488346	4488945	789624	2	1145,230,	0,1359,
#Deleted in new
chr6_GL000253v2_alt	4488394	4493334	chr6_GL000253v2_alt:4488394-4493334	0	-	4488394	4493267	789624	4	107,271,158,167,	0,321,1031,4773,
#Deleted in new
chr6_GL000253v2_alt	4488715	4500470	chr6_GL000253v2_alt:4488715-4500470	0	-	4488715	4493267	789624	4	282,246,302,88,	0,622,4452,11667,
#Deleted in new
chr6_GL000253v2_alt	4488800	4500458	chr6_GL000253v2_alt:4488800-4500458	0	-	4488800	4488800	8553170	3	197,246,76,	0,537,11582,
#Deleted in new
chr6_GL000253v2_alt	4488858	4493330	chr6_GL000253v2_alt:4488858-4493330	0	-	4488858	4488858	8553170	3	139,246,195,	0,479,4277,
#Deleted in new
chr6_GL000253v2_alt	4493198	4500478	chr6_GL000253v2_alt:4493198-4500478	0	-	4493198	4493267	789624	2	209,96,	0,7184,
#Deleted in new
chr6_GL000253v2_alt	4495622	4506904	chr6_GL000253v2_alt:4495622-4506904	3	+	4495738	4505941	789624	6	216,264,282,111,24,663,	0,4752,9030,9859,10299,10619,
#Deleted in new
chr6_GL000253v2_alt	4495668	4506904	chr6_GL000253v2_alt:4495668-4506904	1	+	4495738	4505941	789624	6	170,264,192,111,24,663,	0,4706,9074,9813,10253,10573,
#Deleted in new
chr6_GL000253v2_alt	4495706	4500935	chr6_GL000253v2_alt:4495706-4500935	0	+	4495706	4495706	8553170	2	132,561,	0,4668,
#Deleted in new
chr6_GL000253v2_alt	4499153	4499563	chr6_GL000253v2_alt:4499153-4499563	7	+	4499153	4499153	16724991	1	410,	0,
#Deleted in new
chr6_GL000253v2_alt	4500088	4504660	chr6_GL000253v2_alt:4500088-4504660	0	+	4500088	4500088	8553170	3	149,264,8,	0,286,4564,
#Deleted in new
chr6_GL000253v2_alt	4500088	4503715	chr6_GL000253v2_alt:4500088-4503715	0	+	4500088	4500088	8553170	3	149,264,499,	0,286,3128,
#Deleted in new
chr6_GL000253v2_alt	4500145	4504934	chr6_GL000253v2_alt:4500145-4504934	0	+	4500145	4500145	8553170	2	493,282,	0,4507,
#Deleted in new
chr6_GL000253v2_alt	4500189	4505592	chr6_GL000253v2_alt:4500189-4505592	0	+	4500189	4505592	789624	4	48,247,282,111,	0,202,4463,5292,
#Deleted in new
chr6_GL000253v2_alt	4500374	4506904	chr6_GL000253v2_alt:4500374-4506904	0	+	4500374	4506250	789624	5	264,282,128,24,663,	0,4278,5107,5547,5867,
#Deleted in new
chr6_GL000253v2_alt	4500643	4503593	chr6_GL000253v2_alt:4500643-4503593	0	+	4500643	4500643	8553170	3	291,132,377,	0,1066,2573,
#Deleted in new
chr6_GL000253v2_alt	4511455	4516998	chr6_GL000253v2_alt:4511455-4516998	7	-	4511455	4511455	16724991	4	151,282,245,55,	0,366,1140,5488,
#Deleted in new
chr6_GL000253v2_alt	4523498	4527035	chr6_GL000253v2_alt:4523498-4527035	7	-	4523498	4523498	16724991	6	39,60,167,211,136,63,	0,144,2173,2786,3112,3474,
#Deleted in new
chr6_GL000253v2_alt	4532155	4538892	chr6_GL000253v2_alt:4532155-4538892	5	+	4532155	4532155	16724991	3	165,264,760,	0,4543,5977,
#Deleted in new
chr6_GL000253v2_alt	4532220	4548504	chr6_GL000253v2_alt:4532220-4548504	7	+	4532220	4532220	16724991	5	100,264,281,111,20,	0,4478,15017,15833,16264,
#Deleted in new
chr6_GL000253v2_alt	4550634	4562770	chr6_GL000253v2_alt:4550634-4562770	7	-	4550634	4550634	16724991	2	127,102,	0,12034,
#Deleted in new
chr6_GL000253v2_alt	4564234	4567219	chr6_GL000253v2_alt:4564234-4567219	3	+	4564234	4564234	8553170	2	164,553,	0,2432,
#Deleted in new
chr6_GL000253v2_alt	4582153	4611971	chr6_GL000253v2_alt:4582153-4611971	3	-	4583150	4611712	789624	64	1138,207,113,268,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,87,75,63,42,60,63,192,163,211,150,341,	0,1586,2171,2868,3250,3490,3832,4039,4389,4583,4745,5118,5838,6025,6275,6703,7151,7367,7646,7877,8130,8433,8590,8786,9032,9369,9608,9849,10379,10667,10821,11020,11192,11330,11484,11846,12893,13335,13578,13752,14040,14311,14500,14731,14981,15451,15627,15754,15998,16239,16392,16550,16750,17038,17577,17987,18283,18430,22310,23945,25680,26296,26638,29477,
#Deleted in new
chr6_GL000253v2_alt	4582164	4611940	chr6_GL000253v2_alt:4582164-4611940	1	-	4583150	4611712	789624	66	1127,207,113,268,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,87,75,63,42,60,180,63,78,192,163,211,150,310,	0,1575,2160,2857,3239,3479,3821,4028,4378,4572,4734,5107,5827,6014,6264,6692,7140,7356,7635,7866,8119,8422,8579,8775,9021,9358,9597,9838,10368,10656,10810,11009,11181,11319,11473,11835,12882,13324,13567,13741,14029,14300,14489,14720,14970,15440,15616,15743,15987,16228,16381,16539,16739,17027,17566,17976,18272,18419,21452,22299,23008,23934,25669,26285,26627,29466,
#Deleted in new
chr6_GL000253v2_alt	4582164	4611940	chr6_GL000253v2_alt:4582164-4611940	1	-	4583150	4611712	789624	63	1127,207,113,268,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,87,75,63,42,60,192,163,211,150,310,	0,1575,2160,2857,3239,3479,3821,4028,4378,4572,4734,5107,5827,6014,6264,6692,7140,7356,7635,7866,8119,8422,8579,8775,9021,9358,9597,9838,10368,10656,10810,11009,11181,11319,11473,11835,12882,13324,13567,13741,14029,14300,14489,14720,14970,15440,15616,15743,15987,16228,16381,16539,16739,17027,17566,17976,18272,18419,23934,25669,26285,26627,29466,
#Deleted in new
chr6_GL000253v2_alt	4582167	4597366	chr6_GL000253v2_alt:4582167-4597366	0	-	4582167	4582167	8553170	9	1124,207,113,268,37,45,54,45,91,	0,1572,2157,2854,14314,14486,14717,14967,15108,
#Deleted in new
chr6_GL000253v2_alt	4597604	4611939	chr6_GL000253v2_alt:4597604-4611939	0	-	4597604	4611712	789624	21	54,45,54,54,54,54,54,57,87,75,63,42,60,180,63,78,192,163,211,150,309,	0,176,303,547,788,941,1099,1299,1587,2126,2536,2832,2979,6012,6859,7568,8494,10229,10845,11187,14026,
#Deleted in new
chr6_GL000253v2_alt	4605916	4611926	chr6_GL000253v2_alt:4605916-4611926	1	-	4606023	4611712	789624	5	374,163,211,150,296,	0,1917,2533,2875,5714,
#Deleted in new
chr6_GL000253v2_alt	4613074	4620161	chr6_GL000253v2_alt:4613074-4620161	3	-	4614154	4619949	0	10	1228,106,92,133,130,173,180,157,248,447,	0,1343,1761,1968,2305,2832,4160,4706,5567,6640,
#Deleted in new
chr6_GL000253v2_alt	4613074	4620087	chr6_GL000253v2_alt:4613074-4620087	1	-	4614154	4619949	0	10	1228,106,104,133,130,173,180,157,248,373,	0,1343,1761,1968,2305,2832,4160,4706,5567,6640,
#Deleted in new
chr6_GL000253v2_alt	4613692	4620110	chr6_GL000253v2_alt:4613692-4620110	0	-	4617932	4619949	789624	9	610,106,92,133,130,173,180,157,396,	0,725,1143,1350,1687,2214,3542,4088,6022,
#Deleted in new
chr6_GL000253v2_alt	4614136	4614833	chr6_GL000253v2_alt:4614136-4614833	0	-	4614136	4614136	8553170	2	166,416,	0,281,
#Deleted in new
chr6_GL000253v2_alt	4614521	4615911	chr6_GL000253v2_alt:4614521-4615911	0	-	4614835	4615911	789624	5	2,92,58,130,5,	0,314,521,858,1385,
#Deleted in new
chr6_GL000253v2_alt	4615257	4618108	chr6_GL000253v2_alt:4615257-4618108	0	-	4615257	4615257	8553170	3	822,180,328,	0,1977,2523,
#Deleted in new
chr6_GL000253v2_alt	4619073	4619169	chr6_GL000253v2_alt:4619073-4619169	3	+	4619073	4619073	8553170	1	96,	0,
#Deleted in new
chr6_GL000253v2_alt	4619917	4622165	chr6_GL000253v2_alt:4619917-4622165	0	+	4620270	4622165	789624	5	494,169,54,165,133,	0,1300,1627,1818,2115,
#Deleted in new
chr6_GL000253v2_alt	4620298	4623912	chr6_GL000253v2_alt:4620298-4623912	3	+	4620718	4623286	789624	8	113,415,169,54,165,141,197,899,	0,416,919,1246,1437,1734,2084,2715,
#Deleted in new
chr6_GL000253v2_alt	4620345	4623912	chr6_GL000253v2_alt:4620345-4623912	1	+	4620718	4623286	789624	7	784,169,54,165,141,197,899,	0,872,1199,1390,1687,2037,2668,
#Deleted in new
chr6_GL000253v2_alt	4620397	4623912	chr6_GL000253v2_alt:4620397-4623912	0	+	4620397	4620397	8553170	4	732,169,51,544,	0,820,1147,2971,
#Deleted in new
chr6_GL000253v2_alt	4620718	4623912	chr6_GL000253v2_alt:4620718-4623912	0	+	4620718	4620718	8553170	5	411,169,54,32,439,	0,499,826,1017,2755,
#Deleted in new
chr6_GL000253v2_alt	4621727	4623912	chr6_GL000253v2_alt:4621727-4623912	0	+	4621727	4621727	8553170	4	173,141,197,899,	0,305,655,1286,
#Deleted in new
chr6_GL000253v2_alt	4624114	4626308	chr6_GL000253v2_alt:4624114-4626308	3	+	4624141	4626131	0	9	79,218,117,93,86,85,43,75,194,	0,260,579,805,998,1186,1496,1737,2000,
#Deleted in new
chr6_GL000253v2_alt	4624158	4625926	chr6_GL000253v2_alt:4624158-4625926	0	+	4624158	4624158	8553170	7	434,117,93,86,85,43,75,	0,535,761,954,1142,1452,1693,
#Deleted in new
chr6_GL000253v2_alt	4627971	4632199	chr6_GL000253v2_alt:4627971-4632199	3	+	4628299	4631876	789624	7	150,136,161,216,390,274,425,	0,270,1131,1420,2663,3234,3803,
#Deleted in new
chr6_GL000253v2_alt	4629036	4632199	chr6_GL000253v2_alt:4629036-4632199	0	+	4629036	4629036	8553170	5	227,216,390,274,425,	0,355,1598,2169,2738,
#Deleted in new
chr6_GL000253v2_alt	4635181	4635805	chr6_GL000253v2_alt:4635181-4635805	7	+	4635181	4635181	16724991	1	624,	0,
#Deleted in new
chr6_GL000253v2_alt	4657283	4659175	chr6_GL000253v2_alt:4657283-4659175	7	+	4657283	4657283	16724991	3	553,145,286,	0,837,1606,
#Deleted in new
chr6_GL000253v2_alt	4668994	4674405	chr6_GL000253v2_alt:4668994-4674405	3	+	4668994	4668994	789624	5	122,100,96,194,247,	0,256,1082,1979,5164,
#Deleted in new
chr6_GL000253v2_alt	4669044	4671400	chr6_GL000253v2_alt:4669044-4671400	0	+	4669044	4669044	8553170	4	72,100,103,427,	0,206,1025,1929,
#Deleted in new
chr6_GL000253v2_alt	4669056	4674450	chr6_GL000253v2_alt:4669056-4674450	0	+	4669056	4669056	8553170	5	60,100,96,129,292,	0,194,1020,1982,5102,
#Deleted in new
chr6_GL000253v2_alt	4669732	4671432	chr6_GL000253v2_alt:4669732-4671432	3	-	4670301	4671432	789624	3	716,119,112,	0,1246,1588,
#Deleted in new
chr6_GL000253v2_alt	4669732	4671432	chr6_GL000253v2_alt:4669732-4671432	0	-	4670301	4671432	789624	3	716,119,112,	0,1246,1588,
#Deleted in new
chr6_GL000253v2_alt	4669732	4671432	chr6_GL000253v2_alt:4669732-4671432	0	-	4669732	4669732	8553170	3	716,119,112,	0,1246,1588,
#Deleted in new
chr6_GL000253v2_alt	4669739	4671096	chr6_GL000253v2_alt:4669739-4671096	0	+	4669739	4669739	8553170	2	433,36,	0,1321,
#Deleted in new
chr6_GL000253v2_alt	4670066	4671432	chr6_GL000253v2_alt:4670066-4671432	0	-	4670066	4670066	8553170	3	382,119,112,	0,912,1254,
#Deleted in new
chr6_GL000253v2_alt	4670271	4671432	chr6_GL000253v2_alt:4670271-4671432	0	-	4670271	4670271	8553170	3	177,119,112,	0,707,1049,
#Deleted in new
chr6_GL000253v2_alt	4671377	4671432	chr6_GL000253v2_alt:4671377-4671432	0	-	4671377	4671377	8553170	1	55,	0,
#Deleted in new
chr6_GL000254v2_alt	103466	104604	chr6_GL000254v2_alt:103466-104604	3	-	103466	103466	8553170	2	452,257,	0,881,
#Deleted in new
chr6_GL000254v2_alt	125221	128944	chr6_GL000254v2_alt:125221-128944	3	-	125221	125221	8553170	2	2391,67,	0,3656,
#Deleted in new
chr6_GL000254v2_alt	127012	127644	chr6_GL000254v2_alt:127012-127644	7	+	127012	127012	16724991	1	632,	0,
#Deleted in new
chr6_GL000254v2_alt	154591	155666	chr6_GL000254v2_alt:154591-155666	7	-	154591	154591	16724991	1	1075,	0,
#Deleted in new
chr6_GL000254v2_alt	162285	163076	chr6_GL000254v2_alt:162285-163076	3	+	162285	162285	789624	2	199,212,	0,579,
#Deleted in new
chr6_GL000254v2_alt	168756	173017	chr6_GL000254v2_alt:168756-173017	0	-	170009	173017	789624	3	1272,112,27,	0,1552,4234,
#Deleted in new
chr6_GL000254v2_alt	168756	173318	chr6_GL000254v2_alt:168756-173318	0	-	169824	173318	789624	3	1664,27,72,	0,4234,4490,
#Deleted in new
chr6_GL000254v2_alt	168756	173017	chr6_GL000254v2_alt:168756-173017	0	-	169824	173017	789624	2	1664,27,	0,4234,
#Deleted in new
chr6_GL000254v2_alt	168756	173844	chr6_GL000254v2_alt:168756-173844	0	-	168756	168756	8553170	1	5088,	0,
#Deleted in new
chr6_GL000254v2_alt	170228	173339	chr6_GL000254v2_alt:170228-173339	0	-	170228	170228	8553170	2	192,349,	0,2762,
#Deleted in new
chr6_GL000254v2_alt	181399	181499	chr6_GL000254v2_alt:181399-181499	3	+	181399	181399	8553170	1	100,	0,
#Deleted in new
chr6_GL000254v2_alt	185767	189743	chr6_GL000254v2_alt:185767-189743	0	-	185767	189387	789624	3	231,96,776,	0,1879,3200,
#Deleted in new
chr6_GL000254v2_alt	185767	189744	chr6_GL000254v2_alt:185767-189744	3	-	185767	189387	789624	3	231,96,777,	0,1879,3200,
#Deleted in new
chr6_GL000254v2_alt	185767	185939	chr6_GL000254v2_alt:185767-185939	0	-	185767	185767	8553170	1	172,	0,
#Deleted in new
chr6_GL000254v2_alt	185767	189743	chr6_GL000254v2_alt:185767-189743	0	-	185767	185767	8553170	3	231,96,776,	0,1879,3200,
#Deleted in new
chr6_GL000254v2_alt	185767	187731	chr6_GL000254v2_alt:185767-187731	0	-	185767	185767	8553170	2	231,85,	0,1879,
#Deleted in new
chr6_GL000254v2_alt	209631	210292	chr6_GL000254v2_alt:209631-210292	3	+	209658	210042	789624	2	150,316,	0,345,
#Deleted in new
chr6_GL000254v2_alt	292426	293354	chr6_GL000254v2_alt:292426-293354	7	-	292426	292426	16724991	1	928,	0,
#Deleted in new
chr6_GL000254v2_alt	309954	310982	chr6_GL000254v2_alt:309954-310982	3	-	309954	310917	789624	1	1028,	0,
#Deleted in new
chr6_GL000254v2_alt	329739	342266	chr6_GL000254v2_alt:329739-342266	3	+	329739	342266	789624	3	133,52,229,	0,1124,12298,
#Deleted in new
chr6_GL000254v2_alt	337565	338341	chr6_GL000254v2_alt:337565-338341	7	-	337565	337565	16724991	1	776,	0,
#Deleted in new
chr6_GL000254v2_alt	342314	342910	chr6_GL000254v2_alt:342314-342910	7	-	342314	342314	16724991	1	596,	0,
#Deleted in new
chr6_GL000254v2_alt	352036	353043	chr6_GL000254v2_alt:352036-353043	3	-	352036	352978	789624	1	1007,	0,
#Deleted in new
chr6_GL000254v2_alt	366345	367618	chr6_GL000254v2_alt:366345-367618	3	+	366679	367618	789624	1	1273,	0,
#Deleted in new
chr6_GL000254v2_alt	377629	378403	chr6_GL000254v2_alt:377629-378403	3	+	377629	378403	789624	1	774,	0,
#Deleted in new
chr6_GL000254v2_alt	403615	404552	chr6_GL000254v2_alt:403615-404552	7	-	403615	403615	16724991	1	937,	0,
#Deleted in new
chr6_GL000254v2_alt	439039	440311	chr6_GL000254v2_alt:439039-440311	3	+	439372	440311	789624	1	1272,	0,
#Deleted in new
chr6_GL000254v2_alt	447250	448186	chr6_GL000254v2_alt:447250-448186	7	+	447250	447250	16724991	1	936,	0,
#Deleted in new
chr6_GL000254v2_alt	480984	481928	chr6_GL000254v2_alt:480984-481928	7	+	480984	480984	16724991	1	944,	0,
#Deleted in new
chr6_GL000254v2_alt	556459	557402	chr6_GL000254v2_alt:556459-557402	7	+	556459	556459	16724991	1	943,	0,
#Deleted in new
chr6_GL000254v2_alt	572512	573478	chr6_GL000254v2_alt:572512-573478	3	+	572512	573478	789624	1	966,	0,
#Deleted in new
chr6_GL000254v2_alt	595449	596885	chr6_GL000254v2_alt:595449-596885	7	-	595449	595449	16724991	1	1436,	0,
#Deleted in new
chr6_GL000254v2_alt	621055	622103	chr6_GL000254v2_alt:621055-622103	1	-	621055	622021	789624	1	1048,	0,
#Deleted in new
chr6_GL000254v2_alt	621055	697336	chr6_GL000254v2_alt:621055-697336	3	-	621055	622021	789624	4	1048,76,38,104,	0,66919,67337,76177,
#Deleted in new
chr6_GL000254v2_alt	638935	715469	chr6_GL000254v2_alt:638935-715469	3	-	639849	640800	789624	2	1869,142,	0,76392,
#Deleted in new
chr6_GL000254v2_alt	638935	640804	chr6_GL000254v2_alt:638935-640804	1	-	639849	640800	789624	1	1869,	0,
#Deleted in new
chr6_GL000254v2_alt	661928	662997	chr6_GL000254v2_alt:661928-662997	3	+	662073	662997	789624	1	1069,	0,
#Deleted in new
chr6_GL000254v2_alt	682647	683594	chr6_GL000254v2_alt:682647-683594	7	+	682647	682647	16724991	2	582,270,	0,677,
#Deleted in new
chr6_GL000254v2_alt	690871	693834	chr6_GL000254v2_alt:690871-693834	1	-	692061	693009	789624	2	2229,253,	0,2710,
#Deleted in new
chr6_GL000254v2_alt	690871	722445	chr6_GL000254v2_alt:690871-722445	3	-	692061	693009	789624	5	2229,48,125,124,85,	0,3410,4798,6361,31489,
#Deleted in new
chr6_GL000254v2_alt	690871	693100	chr6_GL000254v2_alt:690871-693100	1	-	692061	693009	789624	1	2229,	0,
#Deleted in new
chr6_GL000254v2_alt	704674	706323	chr6_GL000254v2_alt:704674-706323	3	+	705384	706323	789624	1	1649,	0,
#Deleted in new
chr6_GL000254v2_alt	705307	706346	chr6_GL000254v2_alt:705307-706346	1	+	705378	706323	789624	1	1039,	0,
#Deleted in new
chr6_GL000254v2_alt	722554	729702	chr6_GL000254v2_alt:722554-729702	3	+	727143	728094	789624	4	27,116,51,2830,	0,1273,3223,4318,
#Deleted in new
chr6_GL000254v2_alt	722561	729702	chr6_GL000254v2_alt:722561-729702	1	+	727143	728094	789624	4	20,116,51,2834,	0,1266,3216,4307,
#Deleted in new
chr6_GL000254v2_alt	722576	726460	chr6_GL000254v2_alt:722576-726460	0	+	722576	722576	8553170	4	5,116,164,211,	0,1251,2818,3673,
#Deleted in new
chr6_GL000254v2_alt	725144	729702	chr6_GL000254v2_alt:725144-729702	1	+	727143	728094	789624	3	414,1259,580,	0,1704,3978,
#Deleted in new
chr6_GL000254v2_alt	726813	728107	chr6_GL000254v2_alt:726813-728107	1	+	727143	728094	789624	1	1294,	0,
#Deleted in new
chr6_GL000254v2_alt	726868	728094	chr6_GL000254v2_alt:726868-728094	0	+	726868	726868	8553170	2	256,717,	0,509,
#Deleted in new
chr6_GL000254v2_alt	726868	728094	chr6_GL000254v2_alt:726868-728094	0	+	726868	726868	8553170	2	256,730,	0,496,
#Deleted in new
chr6_GL000254v2_alt	729969	735180	chr6_GL000254v2_alt:729969-735180	7	-	729969	729969	16724991	2	359,22,	0,5189,
#Deleted in new
chr6_GL000254v2_alt	740398	741445	chr6_GL000254v2_alt:740398-741445	7	-	740398	740398	16724991	1	1047,	0,
#Deleted in new
chr6_GL000254v2_alt	752139	753276	chr6_GL000254v2_alt:752139-753276	3	-	752139	753276	789624	1	1137,	0,
#Deleted in new
chr6_GL000254v2_alt	754644	755050	chr6_GL000254v2_alt:754644-755050	7	-	754644	754644	16724991	1	406,	0,
#Deleted in new
chr6_GL000254v2_alt	762883	775931	chr6_GL000254v2_alt:762883-775931	3	+	762883	762883	8553170	4	31,57,500,289,	0,7812,9660,12759,
#Deleted in new
chr6_GL000254v2_alt	794801	798950	chr6_GL000254v2_alt:794801-798950	3	+	794801	794801	789624	3	165,95,2517,	0,529,1632,
#Deleted in new
chr6_GL000254v2_alt	794857	797539	chr6_GL000254v2_alt:794857-797539	0	+	794857	794857	8553170	4	109,95,117,78,	0,473,1576,2604,
#Deleted in new
chr6_GL000254v2_alt	803085	804169	chr6_GL000254v2_alt:803085-804169	7	-	803085	803085	16724991	1	1084,	0,
#Deleted in new
chr6_GL000254v2_alt	818622	819570	chr6_GL000254v2_alt:818622-819570	7	+	818622	818622	16724991	1	948,	0,
#Deleted in new
chr6_GL000254v2_alt	821015	893432	chr6_GL000254v2_alt:821015-893432	1	-	868937	893185	0	19	739,176,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,553,	0,47920,48873,49239,49948,50770,51276,51481,52980,53608,55303,56930,57622,65479,66130,66482,67683,68268,71864,
#Deleted in new
chr6_GL000254v2_alt	821015	825329	chr6_GL000254v2_alt:821015-825329	3	-	821283	825105	0	2	739,251,	0,4063,
#Deleted in new
chr6_GL000254v2_alt	839301	840229	chr6_GL000254v2_alt:839301-840229	7	+	839301	839301	16724991	1	928,	0,
#Deleted in new
chr6_GL000254v2_alt	842852	843142	chr6_GL000254v2_alt:842852-843142	7	+	842852	842852	16724991	1	290,	0,
#Deleted in new
chr6_GL000254v2_alt	847643	847727	chr6_GL000254v2_alt:847643-847727	3	+	847643	847643	789624	1	84,	0,
#Deleted in new
chr6_GL000254v2_alt	847902	848420	chr6_GL000254v2_alt:847902-848420	7	+	847902	847902	16724991	1	518,	0,
#Deleted in new
chr6_GL000254v2_alt	852849	854433	chr6_GL000254v2_alt:852849-854433	3	+	853339	854278	789624	1	1584,	0,
#Deleted in new
chr6_GL000254v2_alt	867624	893407	chr6_GL000254v2_alt:867624-893407	1	-	868937	893185	0	18	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,528,	0,2264,2630,3339,4161,4667,4872,6371,6999,8694,10321,11013,18870,19521,19873,21074,21659,25255,
#Deleted in new
chr6_GL000254v2_alt	867624	898528	chr6_GL000254v2_alt:867624-898528	1	-	868937	897778	0	22	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,204,85,286,	0,2264,2630,3339,4161,4667,4872,6371,6999,8694,10321,11013,18870,19521,19873,21074,21659,25255,26856,29165,30069,30618,
#Deleted in new
chr6_GL000254v2_alt	867624	898553	chr6_GL000254v2_alt:867624-898553	3	-	868937	897778	0	23	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,186,204,85,311,	0,2264,2630,3339,4161,4667,4872,6371,6999,8694,10321,11013,18870,19521,19873,21074,21659,25255,26856,28227,29165,30069,30618,
#Deleted in new
chr6_GL000254v2_alt	867624	874128	chr6_GL000254v2_alt:867624-874128	0	-	867624	867624	8553170	5	1350,94,108,117,133,	0,4161,4667,4872,6371,
#Deleted in new
chr6_GL000254v2_alt	867624	898327	chr6_GL000254v2_alt:867624-898327	0	-	867624	867624	8553170	23	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,122,204,85,85,	0,2264,2630,3339,4161,4667,4872,6371,6999,8694,10321,11013,18870,19521,19873,21074,21659,25255,26856,28291,29165,30069,30618,
#Deleted in new
chr6_GL000254v2_alt	868708	870544	chr6_GL000254v2_alt:868708-870544	0	-	868708	868708	8553170	3	403,144,290,	0,1180,1546,
#Deleted in new
chr6_GL000254v2_alt	870307	897778	chr6_GL000254v2_alt:870307-897778	0	-	870307	870307	8553170	19	76,128,94,108,117,133,78,64,243,192,66,102,171,135,161,21,186,204,85,	0,656,1478,1984,2189,3688,6011,7638,8330,16187,16838,17190,18391,18976,22572,24173,25544,26482,27386,
#Deleted in new
chr6_GL000254v2_alt	870804	871984	chr6_GL000254v2_alt:870804-871984	0	-	870804	870804	8553170	2	287,199,	0,981,
#Deleted in new
chr6_GL000254v2_alt	873848	877994	chr6_GL000254v2_alt:873848-877994	0	-	873848	873848	8553170	3	280,78,49,	0,2470,4097,
#Deleted in new
chr6_GL000254v2_alt	874099	897780	chr6_GL000254v2_alt:874099-897780	1	-	874099	897778	0	14	29,78,64,243,192,66,102,171,135,161,21,186,204,87,	0,2219,3846,4538,12395,13046,13398,14599,15184,18780,20381,21752,22690,23594,
#Deleted in new
chr6_GL000254v2_alt	887197	889655	chr6_GL000254v2_alt:887197-889655	0	-	887197	887197	8553170	4	14,102,171,372,	0,300,1501,2086,
#Deleted in new
chr6_GL000254v2_alt	895292	898460	chr6_GL000254v2_alt:895292-898460	0	-	895292	895292	8553170	4	745,204,85,218,	0,1497,2401,2950,
#Deleted in new
chr6_GL000254v2_alt	901447	901731	chr6_GL000254v2_alt:901447-901731	7	-	901447	901447	16724991	1	284,	0,
#Deleted in new
chr6_GL000254v2_alt	922379	937746	chr6_GL000254v2_alt:922379-937746	3	+	922590	936563	0	8	299,348,114,21,21,117,21,1197,	0,2319,9150,10641,10902,13279,13699,14170,
#Deleted in new
chr6_GL000254v2_alt	922428	931638	chr6_GL000254v2_alt:922428-931638	0	+	922428	922428	8553170	3	250,343,109,	0,2275,9101,
#Deleted in new
chr6_GL000254v2_alt	922472	937746	chr6_GL000254v2_alt:922472-937746	1	+	922590	936257	789624	7	206,348,114,21,21,117,1668,	0,2226,9057,10548,10809,13186,13606,
#Deleted in new
chr6_GL000254v2_alt	922510	925304	chr6_GL000254v2_alt:922510-925304	0	+	922510	922510	8553170	2	168,606,	0,2188,
#Deleted in new
chr6_GL000254v2_alt	922590	937746	chr6_GL000254v2_alt:922590-937746	1	+	922590	936563	789624	8	88,348,114,21,21,48,21,1197,	0,2108,8939,10430,10691,12961,13488,13959,
#Deleted in new
chr6_GL000254v2_alt	922590	937746	chr6_GL000254v2_alt:922590-937746	1	+	922590	936563	789624	7	88,114,21,21,117,21,1197,	0,8939,10430,10691,13068,13488,13959,
#Deleted in new
chr6_GL000254v2_alt	922590	937746	chr6_GL000254v2_alt:922590-937746	1	+	922590	936828	789624	8	88,348,114,21,21,117,21,947,	0,2108,8939,10430,10691,13068,13488,14209,
#Deleted in new
chr6_GL000254v2_alt	922590	937746	chr6_GL000254v2_alt:922590-937746	1	+	922590	936828	789624	7	88,348,114,21,21,21,947,	0,2108,8939,10430,10691,13488,14209,
#Deleted in new
chr6_GL000254v2_alt	922590	937746	chr6_GL000254v2_alt:922590-937746	1	+	922590	936828	789624	8	88,348,114,21,21,48,21,947,	0,2108,8939,10430,10691,12961,13488,14209,
#Deleted in new
chr6_GL000254v2_alt	922590	936107	chr6_GL000254v2_alt:922590-936107	1	+	922590	936107	789624	6	88,114,21,21,117,29,	0,8939,10430,10691,13068,13488,
#Deleted in new
chr6_GL000254v2_alt	922596	937746	chr6_GL000254v2_alt:922596-937746	0	+	922596	936828	789624	6	82,348,114,21,21,947,	0,2102,8933,10424,10685,14203,
#Deleted in new
chr6_GL000254v2_alt	924698	937746	chr6_GL000254v2_alt:924698-937746	0	+	924698	936563	789624	6	348,114,21,21,21,1197,	0,6831,8322,8583,11380,11851,
#Deleted in new
chr6_GL000254v2_alt	924698	937746	chr6_GL000254v2_alt:924698-937746	0	+	924698	924698	8553170	8	348,138,114,21,21,117,21,947,	0,5309,6831,8322,8583,10960,11380,12101,
#Deleted in new
chr6_GL000254v2_alt	924698	937746	chr6_GL000254v2_alt:924698-937746	0	+	924698	924698	8553170	8	348,138,114,21,21,117,21,1197,	0,5309,6831,8322,8583,10960,11380,11851,
#Deleted in new
chr6_GL000254v2_alt	937765	942523	chr6_GL000254v2_alt:937765-942523	1	-	937873	942372	789624	4	1367,102,127,274,	0,2989,3536,4484,
#Deleted in new
chr6_GL000254v2_alt	937856	946481	chr6_GL000254v2_alt:937856-946481	3	-	937873	942372	789624	6	1276,102,127,33,393,49,	0,2898,3445,4393,4486,8576,
#Deleted in new
chr6_GL000254v2_alt	937873	942671	chr6_GL000254v2_alt:937873-942671	1	-	937873	942671	789624	4	1126,67,145,21,	0,2916,3428,4777,
#Deleted in new
chr6_GL000254v2_alt	973469	973892	chr6_GL000254v2_alt:973469-973892	7	-	973469	973469	16724991	1	423,	0,
#Deleted in new
chr6_GL000254v2_alt	985479	988289	chr6_GL000254v2_alt:985479-988289	0	+	986189	988289	789624	6	247,222,270,276,276,117,	0,552,904,1419,2277,2693,
#Deleted in new
chr6_GL000254v2_alt	985706	986697	chr6_GL000254v2_alt:985706-986697	7	-	985706	985706	16724991	1	991,	0,
#Deleted in new
chr6_GL000254v2_alt	986004	986957	chr6_GL000254v2_alt:986004-986957	0	+	986189	986957	789624	3	249,270,59,	0,379,894,
#Deleted in new
chr6_GL000254v2_alt	986117	987141	chr6_GL000254v2_alt:986117-987141	0	+	986117	986117	8553170	2	536,243,	0,781,
#Deleted in new
chr6_GL000254v2_alt	986133	988289	chr6_GL000254v2_alt:986133-988289	0	+	986189	988289	789624	5	120,270,276,276,117,	0,250,765,1623,2039,
#Deleted in new
chr6_GL000254v2_alt	986152	988289	chr6_GL000254v2_alt:986152-988289	0	+	986152	986152	8553170	3	28,187,117,	0,1693,2020,
#Deleted in new
chr6_GL000254v2_alt	986159	987813	chr6_GL000254v2_alt:986159-987813	0	+	986159	986159	8553170	4	94,158,276,57,	0,336,739,1597,
#Deleted in new
chr6_GL000254v2_alt	986189	988289	chr6_GL000254v2_alt:986189-988289	0	+	986189	988289	789624	4	64,270,276,117,	0,194,709,1983,
#Deleted in new
chr6_GL000254v2_alt	986189	988541	chr6_GL000254v2_alt:986189-988541	1	+	986189	988541	789624	5	64,270,276,127,25,	0,194,709,1983,2327,
#Deleted in new
chr6_GL000254v2_alt	986189	988541	chr6_GL000254v2_alt:986189-988541	3	+	986189	988541	789624	6	64,270,276,276,127,25,	0,194,709,1567,1983,2327,
#Deleted in new
chr6_GL000254v2_alt	986229	987078	chr6_GL000254v2_alt:986229-987078	0	+	986229	986229	8553170	2	424,163,	0,686,
#Deleted in new
chr6_GL000254v2_alt	986665	988025	chr6_GL000254v2_alt:986665-988025	0	+	986665	986665	8553170	2	509,269,	0,1091,
#Deleted in new
chr6_GL000254v2_alt	986764	988289	chr6_GL000254v2_alt:986764-988289	0	+	986764	988289	789624	4	44,202,276,117,	0,208,992,1408,
#Deleted in new
chr6_GL000254v2_alt	986882	988289	chr6_GL000254v2_alt:986882-988289	0	+	986882	986882	8553170	3	292,276,117,	0,874,1290,
#Deleted in new
chr6_GL000254v2_alt	987779	988289	chr6_GL000254v2_alt:987779-988289	0	+	987779	987779	8553170	2	253,117,	0,393,
#Deleted in new
chr6_GL000254v2_alt	988179	988289	chr6_GL000254v2_alt:988179-988289	0	+	988179	988179	8553170	1	110,	0,
#Deleted in new
chr6_GL000254v2_alt	988259	988289	chr6_GL000254v2_alt:988259-988289	0	+	988259	988289	789624	1	30,	0,
#Deleted in new
chr6_GL000254v2_alt	1004455	1011695	chr6_GL000254v2_alt:1004455-1011695	7	-	1004455	1004455	16724991	6	125,144,278,285,255,70,	0,2278,2536,3218,3741,7170,
#Deleted in new
chr6_GL000254v2_alt	1008196	1011719	chr6_GL000254v2_alt:1008196-1011719	2	-	1008196	1008196	8553170	2	255,94,	0,3429,
#Deleted in new
chr6_GL000254v2_alt	1009886	1011775	chr6_GL000254v2_alt:1009886-1011775	1	-	1009886	1009886	8553170	2	278,150,	0,1739,
#Deleted in new
chr6_GL000254v2_alt	1011014	1011239	chr6_GL000254v2_alt:1011014-1011239	7	+	1011014	1011014	16724991	1	225,	0,
#Deleted in new
chr6_GL000254v2_alt	1013096	1013198	chr6_GL000254v2_alt:1013096-1013198	3	+	1013096	1013096	8553170	1	102,	0,
#Deleted in new
chr6_GL000254v2_alt	1013454	1013874	chr6_GL000254v2_alt:1013454-1013874	7	-	1013454	1013454	16724991	1	420,	0,
#Deleted in new
chr6_GL000254v2_alt	1053510	1055421	chr6_GL000254v2_alt:1053510-1055421	5	+	1053510	1053510	16724991	4	14,68,254,334,	0,847,1192,1577,
#Deleted in new
chr6_GL000254v2_alt	1053604	1055752	chr6_GL000254v2_alt:1053604-1055752	4	+	1053604	1053604	16724991	4	33,68,81,665,	0,753,1271,1483,
#Deleted in new
chr6_GL000254v2_alt	1054002	1060283	chr6_GL000254v2_alt:1054002-1060283	7	+	1054002	1054002	16724991	7	47,68,196,450,191,2013,460,	0,355,758,1085,1999,2361,5821,
#Deleted in new
chr6_GL000254v2_alt	1054403	1055401	chr6_GL000254v2_alt:1054403-1055401	7	-	1054403	1054403	16724991	1	998,	0,
#Deleted in new
chr6_GL000254v2_alt	1054556	1060283	chr6_GL000254v2_alt:1054556-1060283	5	+	1054556	1054556	16724991	3	400,270,619,	0,531,5108,
#Deleted in new
chr6_GL000254v2_alt	1054873	1060283	chr6_GL000254v2_alt:1054873-1060283	5	+	1054873	1054873	16724991	3	83,270,4282,	0,214,1128,
#Deleted in new
chr6_GL000254v2_alt	1054884	1055787	chr6_GL000254v2_alt:1054884-1055787	5	+	1054884	1054884	16724991	3	72,270,192,	0,203,711,
#Deleted in new
chr6_GL000254v2_alt	1062886	1064895	chr6_GL000254v2_alt:1062886-1064895	7	+	1062886	1062886	16724991	5	258,276,117,37,46,	0,847,1247,1776,1963,
#Deleted in new
chr6_GL000254v2_alt	1065666	1066463	chr6_GL000254v2_alt:1065666-1066463	7	-	1065666	1065666	16724991	1	797,	0,
#Deleted in new
chr6_GL000254v2_alt	1075038	1075170	chr6_GL000254v2_alt:1075038-1075170	7	-	1075038	1075038	16724991	1	132,	0,
#Deleted in new
chr6_GL000254v2_alt	1089437	1093596	chr6_GL000254v2_alt:1089437-1093596	3	+	1089509	1092853	789624	8	78,82,270,276,276,117,33,358,	0,869,1080,1576,2451,2849,3411,3801,
#Deleted in new
chr6_GL000254v2_alt	1089449	1093593	chr6_GL000254v2_alt:1089449-1093593	1	+	1090315	1092853	0	8	66,185,270,276,276,117,33,355,	0,754,1068,1564,2439,2837,3399,3789,
#Deleted in new
chr6_GL000254v2_alt	1089855	1090835	chr6_GL000254v2_alt:1089855-1090835	7	-	1089855	1089855	16724991	1	980,	0,
#Deleted in new
chr6_GL000254v2_alt	1090291	1093596	chr6_GL000254v2_alt:1090291-1093596	1	+	1090315	1092853	0	7	97,270,276,276,117,33,358,	0,226,722,1597,1995,2557,2947,
#Deleted in new
chr6_GL000254v2_alt	1090315	1093596	chr6_GL000254v2_alt:1090315-1093596	1	+	1090315	1092853	789624	6	73,270,276,117,33,358,	0,202,1573,1971,2533,2923,
#Deleted in new
chr6_GL000254v2_alt	1090315	1093596	chr6_GL000254v2_alt:1090315-1093596	1	+	1090315	1092853	0	5	73,270,117,33,358,	0,202,1971,2533,2923,
#Deleted in new
chr6_GL000254v2_alt	1090315	1093596	chr6_GL000254v2_alt:1090315-1093596	0	+	1090315	1092853	789624	7	73,270,276,117,33,48,358,	0,202,1573,1971,2533,2708,2923,
#Deleted in new
chr6_GL000254v2_alt	1090315	1093596	chr6_GL000254v2_alt:1090315-1093596	0	+	1090315	1090315	8553170	6	73,270,276,515,33,358,	0,202,698,1573,2533,2923,
#Deleted in new
chr6_GL000254v2_alt	1114806	1114935	chr6_GL000254v2_alt:1114806-1114935	7	-	1114806	1114806	16724991	1	129,	0,
#Deleted in new
chr6_GL000254v2_alt	1144138	1145107	chr6_GL000254v2_alt:1144138-1145107	7	-	1144138	1144138	16724991	1	969,	0,
#Deleted in new
chr6_GL000254v2_alt	1144596	1147319	chr6_GL000254v2_alt:1144596-1147319	7	+	1144596	1144596	16724991	7	73,270,276,275,117,33,44,	0,197,709,1570,1947,2504,2679,
#Deleted in new
chr6_GL000254v2_alt	1153402	1154534	chr6_GL000254v2_alt:1153402-1154534	7	+	1153402	1153402	16724991	4	272,102,37,39,	0,397,908,1093,
#Deleted in new
chr6_GL000254v2_alt	1163373	1163740	chr6_GL000254v2_alt:1163373-1163740	7	+	1163373	1163373	16724991	2	135,57,	0,310,
#Deleted in new
chr6_GL000254v2_alt	1164612	1165475	chr6_GL000254v2_alt:1164612-1165475	7	-	1164612	1164612	16724991	2	161,167,	0,696,
#Deleted in new
chr6_GL000254v2_alt	1286635	1289979	chr6_GL000254v2_alt:1286635-1289979	0	+	1286635	1289550	789624	5	71,270,276,276,434,	0,201,712,1588,2910,
#Deleted in new
chr6_GL000254v2_alt	1286635	1287147	chr6_GL000254v2_alt:1286635-1287147	7	-	1286635	1286635	16724991	1	512,	0,
#Deleted in new
chr6_GL000254v2_alt	1286635	1289979	chr6_GL000254v2_alt:1286635-1289979	0	+	1286635	1289550	789624	8	71,270,276,276,117,33,48,434,	0,201,712,1588,1963,2518,2693,2910,
#Deleted in new
chr6_GL000254v2_alt	1286635	1289979	chr6_GL000254v2_alt:1286635-1289979	3	+	1286635	1289550	789624	8	71,270,276,276,135,33,48,434,	0,201,712,1588,1963,2518,2693,2910,
#Deleted in new
chr6_GL000254v2_alt	1286635	1289979	chr6_GL000254v2_alt:1286635-1289979	0	+	1286635	1286635	8553170	7	71,787,276,117,29,48,434,	0,201,1588,1963,2522,2693,2910,
#Deleted in new
chr6_GL000254v2_alt	1286635	1289376	chr6_GL000254v2_alt:1286635-1289376	0	+	1286635	1286635	8553170	6	71,787,276,135,33,48,	0,201,1588,1963,2518,2693,
#Deleted in new
chr6_GL000254v2_alt	1286635	1289979	chr6_GL000254v2_alt:1286635-1289979	0	+	1286635	1286635	8553170	7	71,98,259,276,588,48,434,	0,201,729,1588,1963,2693,2910,
#Deleted in new
chr6_GL000254v2_alt	1286635	1289376	chr6_GL000254v2_alt:1286635-1289376	0	+	1286635	1286635	8553170	6	71,787,276,117,33,48,	0,201,1588,1963,2518,2693,
#Deleted in new
chr6_GL000254v2_alt	1300662	1302624	chr6_GL000254v2_alt:1300662-1302624	7	+	1300662	1300662	16724991	5	261,275,154,37,31,	0,843,1245,1745,1931,
#Deleted in new
chr6_GL000254v2_alt	1314843	1316507	chr6_GL000254v2_alt:1314843-1316507	7	-	1314843	1314843	16724991	3	276,281,256,	0,887,1408,
#Deleted in new
chr6_GL000254v2_alt	1319164	1322464	chr6_GL000254v2_alt:1319164-1322464	3	+	1319164	1319164	789624	3	406,64,193,	0,2543,3107,
#Deleted in new
chr6_GL000254v2_alt	1337264	1337661	chr6_GL000254v2_alt:1337264-1337661	7	+	1337264	1337264	16724991	2	123,135,	0,262,
#Deleted in new
chr6_GL000254v2_alt	1338492	1339370	chr6_GL000254v2_alt:1338492-1339370	7	-	1338492	1338492	16724991	2	165,170,	0,708,
#Deleted in new
chr6_GL000254v2_alt	1345066	1405021	chr6_GL000254v2_alt:1345066-1405021	0	-	1345066	1345066	8553170	3	1722,76,188,	0,57141,59767,
#Deleted in new
chr6_GL000254v2_alt	1345066	1405277	chr6_GL000254v2_alt:1345066-1405277	0	-	1345066	1345066	789624	6	1722,203,68,76,255,106,	0,33915,34923,57141,59767,60105,
#Deleted in new
chr6_GL000254v2_alt	1345066	1405237	chr6_GL000254v2_alt:1345066-1405237	0	-	1345066	1345066	8553170	12	1722,202,174,119,43,279,106,95,203,68,76,183,	0,2156,6212,6513,7621,7882,8715,20674,33915,34923,57141,59988,
#Deleted in new
chr6_GL000254v2_alt	1345066	1405236	chr6_GL000254v2_alt:1345066-1405236	0	-	1345066	1345066	8553170	4	1722,95,76,403,	0,20674,57141,59767,
#Deleted in new
chr6_GL000254v2_alt	1350176	1351172	chr6_GL000254v2_alt:1350176-1351172	7	-	1350176	1350176	16724991	1	996,	0,
#Deleted in new
chr6_GL000254v2_alt	1350638	1354012	chr6_GL000254v2_alt:1350638-1354012	5	+	1350638	1350638	16724991	6	87,270,274,140,48,422,	0,217,1606,2455,2737,2952,
#Deleted in new
chr6_GL000254v2_alt	1350642	1354012	chr6_GL000254v2_alt:1350642-1354012	5	+	1350642	1350642	16724991	6	83,270,274,117,140,422,	0,213,1602,1998,2451,2948,
#Deleted in new
chr6_GL000254v2_alt	1350651	1354012	chr6_GL000254v2_alt:1350651-1354012	7	+	1350651	1350651	16724991	5	74,274,140,48,422,	0,1593,2442,2724,2939,
#Deleted in new
chr6_GL000254v2_alt	1350661	1353595	chr6_GL000254v2_alt:1350661-1353595	5	+	1350661	1350661	16724991	8	64,270,276,274,117,33,48,5,	0,194,712,1583,1979,2539,2714,2929,
#Deleted in new
chr6_GL000254v2_alt	1354884	1356329	chr6_GL000254v2_alt:1354884-1356329	0	-	1354884	1354884	8553170	1	1445,	0,
#Deleted in new
chr6_GL000254v2_alt	1356154	1379089	chr6_GL000254v2_alt:1356154-1379089	3	-	1356154	1356154	8553170	2	9681,108,	0,22827,
#Deleted in new
chr6_GL000254v2_alt	1363843	1405733	chr6_GL000254v2_alt:1363843-1405733	0	-	1363843	1363843	8553170	6	155,95,203,68,76,900,	0,1897,15138,16146,38364,40990,
#Deleted in new
chr6_GL000254v2_alt	1375786	1377077	chr6_GL000254v2_alt:1375786-1377077	7	+	1375786	1375786	16724991	2	436,548,	0,743,
#Deleted in new
chr6_GL000254v2_alt	1379008	1402840	chr6_GL000254v2_alt:1379008-1402840	0	-	1379008	1379008	8553170	4	176,68,76,380,	0,981,23199,23452,
#Deleted in new
chr6_GL000254v2_alt	1379503	1405282	chr6_GL000254v2_alt:1379503-1405282	0	-	1379503	1379503	8553170	4	554,627,76,449,	0,21680,22704,25330,
#Deleted in new
chr6_GL000254v2_alt	1379989	1380057	chr6_GL000254v2_alt:1379989-1380057	3	+	1379989	1379989	8553170	1	68,	0,
#Deleted in new
chr6_GL000254v2_alt	1398693	1405272	chr6_GL000254v2_alt:1398693-1405272	0	-	1398693	1398693	8553170	3	3117,76,101,	0,3514,6478,
#Deleted in new
chr6_GL000254v2_alt	1400845	1405072	chr6_GL000254v2_alt:1400845-1405072	0	-	1400845	1400845	8553170	3	965,76,2612,	0,1362,1615,
#Deleted in new
chr6_GL000254v2_alt	1402207	1402283	chr6_GL000254v2_alt:1402207-1402283	3	+	1402207	1402207	8553170	1	76,	0,
#Deleted in new
chr6_GL000254v2_alt	1402991	1408999	chr6_GL000254v2_alt:1402991-1408999	0	+	1402991	1402991	8553170	2	3435,237,	0,5771,
#Deleted in new
chr6_GL000254v2_alt	1405172	1405276	chr6_GL000254v2_alt:1405172-1405276	3	+	1405172	1405172	8553170	1	104,	0,
#Deleted in new
chr6_GL000254v2_alt	1405346	1408999	chr6_GL000254v2_alt:1405346-1408999	1	+	1405617	1408787	789624	4	416,101,110,237,	0,663,970,3416,
#Deleted in new
chr6_GL000254v2_alt	1405349	1408999	chr6_GL000254v2_alt:1405349-1408999	1	+	1405617	1408787	789624	5	133,155,101,110,237,	0,258,660,967,3413,
#Deleted in new
chr6_GL000254v2_alt	1405351	1408999	chr6_GL000254v2_alt:1405351-1408999	1	+	1405617	1408787	789624	5	140,155,101,110,237,	0,256,658,965,3411,
#Deleted in new
chr6_GL000254v2_alt	1405355	1408999	chr6_GL000254v2_alt:1405355-1408999	1	+	1405617	1408787	789624	5	151,155,101,110,237,	0,252,654,961,3407,
#Deleted in new
chr6_GL000254v2_alt	1405422	1408999	chr6_GL000254v2_alt:1405422-1408999	2	+	1405422	1405422	789624	4	69,155,110,237,	0,185,894,3340,
#Deleted in new
chr6_GL000254v2_alt	1410798	1414423	chr6_GL000254v2_alt:1410798-1414423	3	+	1412766	1413396	789624	3	301,109,1230,	0,1881,2395,
#Deleted in new
chr6_GL000254v2_alt	1411177	1414423	chr6_GL000254v2_alt:1411177-1414423	1	+	1411500	1413396	789624	3	392,109,1230,	0,1502,2016,
#Deleted in new
chr6_GL000254v2_alt	1411294	1414423	chr6_GL000254v2_alt:1411294-1414423	1	+	1412766	1413396	789624	4	275,75,109,1230,	0,1074,1385,1899,
#Deleted in new
chr6_GL000254v2_alt	1411632	1414423	chr6_GL000254v2_alt:1411632-1414423	1	+	1412766	1413396	789624	4	122,75,109,1230,	0,736,1047,1561,
#Deleted in new
chr6_GL000254v2_alt	1411665	1414423	chr6_GL000254v2_alt:1411665-1414423	1	+	1412766	1413396	789624	4	50,75,109,1230,	0,703,1014,1528,
#Deleted in new
chr6_GL000254v2_alt	1412295	1414423	chr6_GL000254v2_alt:1412295-1414423	1	+	1412766	1413396	789624	2	493,1230,	0,898,
#Deleted in new
chr6_GL000254v2_alt	1414355	1419977	chr6_GL000254v2_alt:1414355-1419977	3	-	1415200	1419879	789624	4	1426,92,23,665,	0,2891,3190,4957,
#Deleted in new
chr6_GL000254v2_alt	1414355	1419939	chr6_GL000254v2_alt:1414355-1419939	1	-	1415200	1419879	789624	5	935,293,92,23,627,	0,1133,2891,3190,4957,
#Deleted in new
chr6_GL000254v2_alt	1446971	1457179	chr6_GL000254v2_alt:1446971-1457179	3	-	1447610	1456878	0	9	893,66,75,116,23,231,96,500,43,	0,1205,2271,5157,6126,7550,8749,9490,10165,
#Deleted in new
chr6_GL000254v2_alt	1446971	1456963	chr6_GL000254v2_alt:1446971-1456963	0	-	1446971	1446971	789624	7	893,66,75,72,231,96,502,	0,1205,2271,5157,7550,8749,9490,
#Deleted in new
chr6_GL000254v2_alt	1446971	1449732	chr6_GL000254v2_alt:1446971-1449732	0	-	1446971	1446971	8553170	4	349,318,66,490,	0,575,1205,2271,
#Deleted in new
chr6_GL000254v2_alt	1447436	1454595	chr6_GL000254v2_alt:1447436-1454595	0	-	1447436	1447436	8553170	6	428,66,75,72,23,74,	0,740,1806,4692,5661,7085,
#Deleted in new
chr6_GL000254v2_alt	1447947	1452275	chr6_GL000254v2_alt:1447947-1452275	0	-	1447947	1447947	8553170	3	295,75,147,	0,1295,4181,
#Deleted in new
chr6_GL000254v2_alt	1448005	1449515	chr6_GL000254v2_alt:1448005-1449515	0	-	1448005	1448005	8553170	2	237,273,	0,1237,
#Deleted in new
chr6_GL000254v2_alt	1449270	1456259	chr6_GL000254v2_alt:1449270-1456259	0	-	1449270	1449270	8553170	6	47,116,23,231,96,107,	0,2858,3827,5251,6450,6882,
#Deleted in new
chr6_GL000254v2_alt	1449314	1458797	chr6_GL000254v2_alt:1449314-1458797	3	+	1449314	1449314	789624	4	148,125,122,154,	0,2424,6476,9329,
#Deleted in new
chr6_GL000254v2_alt	1452817	1455779	chr6_GL000254v2_alt:1452817-1455779	0	-	1452817	1452817	8553170	3	303,231,59,	0,1704,2903,
#Deleted in new
chr6_GL000254v2_alt	1455290	1456548	chr6_GL000254v2_alt:1455290-1456548	0	-	1455290	1455290	8553170	2	526,87,	0,1171,
#Deleted in new
chr6_GL000254v2_alt	1476893	1477056	chr6_GL000254v2_alt:1476893-1477056	3	-	1476893	1476893	8553170	1	163,	0,
#Deleted in new
chr6_GL000254v2_alt	1480196	1492817	chr6_GL000254v2_alt:1480196-1492817	3	+	1481125	1491894	789624	6	82,649,96,225,23,1011,	0,625,9879,10870,11405,11610,
#Deleted in new
chr6_GL000254v2_alt	1480212	1481287	chr6_GL000254v2_alt:1480212-1481287	0	+	1480212	1480212	8553170	2	475,466,	0,609,
#Deleted in new
chr6_GL000254v2_alt	1480819	1492817	chr6_GL000254v2_alt:1480819-1492817	1	+	1481125	1491894	789624	5	651,96,225,23,1011,	0,9256,10247,10782,10987,
#Deleted in new
chr6_GL000254v2_alt	1481098	1492817	chr6_GL000254v2_alt:1481098-1492817	1	+	1481125	1491894	789624	5	372,96,138,23,1011,	0,8977,10055,10503,10708,
#Deleted in new
chr6_GL000254v2_alt	1496019	1505010	chr6_GL000254v2_alt:1496019-1505010	1	-	1497765	1504935	789624	8	1830,176,33,116,23,231,96,504,	0,2369,3785,4997,5427,6456,7207,8487,
#Deleted in new
chr6_GL000254v2_alt	1496019	1505011	chr6_GL000254v2_alt:1496019-1505011	3	-	1498046	1504935	789624	7	2545,33,116,23,231,96,505,	0,3785,4997,5427,6456,7207,8487,
#Deleted in new
chr6_GL000254v2_alt	1507278	1516762	chr6_GL000254v2_alt:1507278-1516762	3	+	1507964	1516422	789624	8	860,96,231,9,14,116,33,858,	0,3970,5094,6035,6633,7295,7770,8626,
#Deleted in new
chr6_GL000254v2_alt	1507288	1516769	chr6_GL000254v2_alt:1507288-1516769	1	+	1507757	1516422	789624	7	850,96,231,23,116,33,865,	0,3960,5084,6025,7285,7760,8616,
#Deleted in new
chr6_GL000254v2_alt	1507757	1516758	chr6_GL000254v2_alt:1507757-1516758	1	+	1507757	1516680	789624	2	306,120,	0,8881,
#Deleted in new
chr6_GL000254v2_alt	1512385	1516028	chr6_GL000254v2_alt:1512385-1516028	0	+	1512385	1516028	789624	5	218,23,116,33,101,	0,928,2188,2663,3542,
#Deleted in new
chr6_GL000254v2_alt	1512429	1516769	chr6_GL000254v2_alt:1512429-1516769	0	+	1512429	1512429	8553170	6	174,23,116,33,65,124,	0,884,2144,2619,3475,4216,
#Deleted in new
chr6_GL000254v2_alt	1514385	1515170	chr6_GL000254v2_alt:1514385-1515170	0	+	1514385	1514385	8553170	2	304,122,	0,663,
#Deleted in new
chr6_GL000254v2_alt	1528483	1557367	chr6_GL000254v2_alt:1528483-1557367	1	-	1529904	1543130	789624	9	2104,33,116,23,231,96,488,104,32,	0,4707,4958,5554,12059,13972,14209,16578,28852,
#Deleted in new
chr6_GL000254v2_alt	1528483	1557367	chr6_GL000254v2_alt:1528483-1557367	1	-	1529904	1543130	789624	10	2104,33,116,23,231,96,599,104,110,32,	0,4707,4958,5554,12059,13972,14209,16578,20200,28852,
#Deleted in new
chr6_GL000254v2_alt	1528483	1548793	chr6_GL000254v2_alt:1528483-1548793	1	-	1529904	1543130	789624	9	2104,33,116,23,231,96,488,49,110,	0,4707,4958,5554,12059,13972,14209,16578,20200,
#Deleted in new
chr6_GL000254v2_alt	1528483	1534419	chr6_GL000254v2_alt:1528483-1534419	0	-	1528483	1528483	8553170	3	2104,33,978,	0,4707,4958,
#Deleted in new
chr6_GL000254v2_alt	1530828	1532638	chr6_GL000254v2_alt:1530828-1532638	7	-	1530828	1530828	16724991	2	840,363,	0,1447,
#Deleted in new
chr6_GL000254v2_alt	1540562	1557367	chr6_GL000254v2_alt:1540562-1557367	0	-	1540562	1543130	789624	6	211,96,488,104,110,32,	0,1893,2130,4499,8121,16773,
#Deleted in new
chr6_GL000254v2_alt	1540605	1548749	chr6_GL000254v2_alt:1540605-1548749	0	-	1540605	1543130	789624	5	168,96,263,89,66,	0,1850,2312,4456,8078,
#Deleted in new
chr6_GL000254v2_alt	1542517	1557367	chr6_GL000254v2_alt:1542517-1557367	0	-	1542517	1543130	789624	3	34,488,32,	0,175,14818,
#Deleted in new
chr6_GL000254v2_alt	1542764	1557367	chr6_GL000254v2_alt:1542764-1557367	2	-	1542764	1543130	789624	3	410,110,32,	0,5919,14571,
#Deleted in new
chr6_GL000254v2_alt	1542790	1557367	chr6_GL000254v2_alt:1542790-1557367	0	-	1542790	1542790	8553170	4	227,104,110,32,	0,2271,5893,14545,
#Deleted in new
chr6_GL000254v2_alt	1758752	1763357	chr6_GL000254v2_alt:1758752-1763357	7	+	1758752	1758752	16724991	5	251,286,271,131,116,	0,517,1404,1791,4489,
#Deleted in new
chr6_GL000254v2_alt	1833522	1838261	chr6_GL000254v2_alt:1833522-1838261	3	+	1833587	1836637	789624	8	129,270,276,276,117,33,43,1457,	0,259,773,1670,2070,2937,3074,3282,
#Deleted in new
chr6_GL000254v2_alt	1833565	1834421	chr6_GL000254v2_alt:1833565-1834421	0	+	1833565	1833565	8553170	2	86,640,	0,216,
#Deleted in new
chr6_GL000254v2_alt	1833567	1835339	chr6_GL000254v2_alt:1833567-1835339	0	+	1833567	1833567	8553170	3	484,276,147,	0,728,1625,
#Deleted in new
chr6_GL000254v2_alt	1860308	1863260	chr6_GL000254v2_alt:1860308-1863260	3	+	1860308	1860308	8553170	2	346,505,	0,2447,
#Deleted in new
chr6_GL000254v2_alt	1885422	1901220	chr6_GL000254v2_alt:1885422-1901220	3	-	1890117	1900249	789624	12	4937,141,163,179,195,96,208,72,152,137,166,1044,	0,5319,5735,5975,11090,11707,11973,13198,13387,13678,14178,14754,
#Deleted in new
chr6_GL000254v2_alt	1890530	1896592	chr6_GL000254v2_alt:1890530-1896592	0	-	1890530	1890530	8553170	4	352,163,179,80,	0,627,867,5982,
#Deleted in new
chr6_GL000254v2_alt	1891241	1891863	chr6_GL000254v2_alt:1891241-1891863	0	-	1891241	1891241	8553170	2	79,466,	0,156,
#Deleted in new
chr6_GL000254v2_alt	1896222	1897166	chr6_GL000254v2_alt:1896222-1897166	0	-	1896222	1896222	8553170	2	485,37,	0,907,
#Deleted in new
chr6_GL000254v2_alt	1897405	1900134	chr6_GL000254v2_alt:1897405-1900134	0	-	1897405	1899833	789624	5	198,72,152,137,534,	0,1215,1404,1695,2195,
#Deleted in new
chr6_GL000254v2_alt	1900931	1907769	chr6_GL000254v2_alt:1900931-1907769	3	+	1901390	1906541	789624	4	565,63,291,1335,	0,1264,4948,5503,
#Deleted in new
chr6_GL000254v2_alt	1901325	1907769	chr6_GL000254v2_alt:1901325-1907769	1	+	1901390	1906541	789624	3	171,291,1335,	0,4554,5109,
#Deleted in new
chr6_GL000254v2_alt	1901359	1907769	chr6_GL000254v2_alt:1901359-1907769	0	+	1901359	1901359	8553170	4	137,181,291,1335,	0,4014,4520,5075,
#Deleted in new
chr6_GL000254v2_alt	1901361	1907769	chr6_GL000254v2_alt:1901361-1907769	0	+	1901361	1901361	8553170	5	135,63,181,291,1335,	0,834,4012,4518,5073,
#Deleted in new
chr6_GL000254v2_alt	1901392	1902482	chr6_GL000254v2_alt:1901392-1902482	0	+	1901392	1901392	8553170	2	104,287,	0,803,
#Deleted in new
chr6_GL000254v2_alt	1904076	1907769	chr6_GL000254v2_alt:1904076-1907769	0	+	1904076	1904076	8553170	2	2094,1335,	0,2358,
#Deleted in new
chr6_GL000254v2_alt	1915421	1935477	chr6_GL000254v2_alt:1915421-1935477	3	+	1915533	1934747	789624	25	185,47,96,127,38,108,75,114,114,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,897,	0,6033,6442,6700,6972,7094,8555,9030,11018,11690,12232,12429,12816,13042,13884,14182,14503,14758,15098,15265,18312,18430,18773,18930,19159,
#Deleted in new
chr6_GL000254v2_alt	1915438	1935477	chr6_GL000254v2_alt:1915438-1935477	1	+	1915533	1934747	789624	24	168,47,96,127,38,108,75,114,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,897,	0,6016,6425,6683,6955,7077,8538,9013,11673,12215,12412,12799,13025,13867,14165,14486,14741,15081,15248,18295,18413,18756,18913,19142,
#Deleted in new
chr6_GL000254v2_alt	1915478	1927754	chr6_GL000254v2_alt:1915478-1927754	0	+	1915533	1927754	789624	11	128,47,96,130,38,108,75,114,114,123,101,	0,5976,6385,6640,6915,7037,8498,8973,10961,11633,12175,
#Deleted in new
chr6_GL000254v2_alt	1915487	1924494	chr6_GL000254v2_alt:1915487-1924494	0	+	1915487	1915487	8553170	7	119,96,127,38,108,75,43,	0,6376,6634,6906,7028,8489,8964,
#Deleted in new
chr6_GL000254v2_alt	1915497	1935477	chr6_GL000254v2_alt:1915497-1935477	1	+	1915533	1934747	789624	8	109,47,96,99,97,65,73,897,	0,5957,6366,6624,18426,18697,18854,19083,
#Deleted in new
chr6_GL000254v2_alt	1926510	1941226	chr6_GL000254v2_alt:1926510-1941226	0	+	1926510	1926510	8553170	18	43,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,627,611,	0,601,1143,1340,1727,1953,2795,3093,3414,3669,4009,4176,7223,7341,7684,7841,8070,14105,
#Deleted in new
chr6_GL000254v2_alt	1933474	1934789	chr6_GL000254v2_alt:1933474-1934789	0	+	1933474	1933474	8553170	4	546,65,73,209,	0,720,877,1106,
#Deleted in new
chr6_GL000254v2_alt	1944446	1961292	chr6_GL000254v2_alt:1944446-1961292	3	-	1945595	1953991	789624	20	1259,756,114,76,195,64,247,159,148,101,113,106,174,78,52,136,87,118,521,21,	0,1536,2446,2810,3072,3380,3608,3953,4188,4594,5523,5738,6068,6379,7440,8379,8677,9438,16079,16825,
#Deleted in new
chr6_GL000254v2_alt	1947619	1948259	chr6_GL000254v2_alt:1947619-1948259	0	-	1947619	1947619	8553170	2	271,205,	0,435,
#Deleted in new
chr6_GL000254v2_alt	1948658	1950045	chr6_GL000254v2_alt:1948658-1950045	0	-	1948658	1948658	8553170	2	483,76,	0,1311,
#Deleted in new
chr6_GL000254v2_alt	1949064	1950784	chr6_GL000254v2_alt:1949064-1950784	0	-	1949064	1949064	8553170	4	77,113,106,270,	0,905,1120,1450,
#Deleted in new
chr6_GL000254v2_alt	1949855	1950290	chr6_GL000254v2_alt:1949855-1950290	0	-	1949855	1949855	8553170	2	227,106,	0,329,
#Deleted in new
chr6_GL000254v2_alt	1953993	1961292	chr6_GL000254v2_alt:1953993-1961292	0	-	1953993	1953993	8553170	4	9,54,521,21,	0,4602,6532,7278,
#Deleted in new
chr6_GL000254v2_alt	1960631	1962660	chr6_GL000254v2_alt:1960631-1962660	0	-	1960631	1960631	8553170	2	415,55,	0,1974,
#Deleted in new
chr6_GL000254v2_alt	1961756	1970443	chr6_GL000254v2_alt:1961756-1970443	3	+	1961913	1969845	0	7	235,109,98,69,67,60,894,	0,1784,2000,2212,5123,7174,7793,
#Deleted in new
chr6_GL000254v2_alt	1961890	1964172	chr6_GL000254v2_alt:1961890-1964172	0	+	1961890	1961890	8553170	4	101,109,98,204,	0,1650,1866,2078,
#Deleted in new
chr6_GL000254v2_alt	1961899	1970443	chr6_GL000254v2_alt:1961899-1970443	0	+	1961899	1961899	8553170	5	92,497,67,60,894,	0,1641,4980,7031,7650,
#Deleted in new
chr6_GL000254v2_alt	1961907	1970443	chr6_GL000254v2_alt:1961907-1970443	1	+	1961913	1969845	789624	5	84,109,98,67,894,	0,1633,1849,4972,7642,
#Deleted in new
chr6_GL000254v2_alt	1961907	1970443	chr6_GL000254v2_alt:1961907-1970443	0	+	1961907	1961907	8553170	7	84,109,126,69,67,60,894,	0,1633,1821,2061,4972,7023,7642,
#Deleted in new
chr6_GL000254v2_alt	1970889	1988729	chr6_GL000254v2_alt:1970889-1988729	1	+	1970933	1987065	0	9	151,61,92,61,114,102,46,72,1912,	0,618,794,1009,1190,1487,13535,15336,15928,
#Deleted in new
chr6_GL000254v2_alt	1970903	1990873	chr6_GL000254v2_alt:1970903-1990873	1	+	1970933	1990693	0	13	137,61,92,61,114,102,46,69,72,244,80,43,355,	0,604,780,995,1176,1473,13521,13679,15322,15914,19041,19213,19615,
#Deleted in new
chr6_GL000254v2_alt	1970922	1988729	chr6_GL000254v2_alt:1970922-1988729	1	+	1970933	1987612	0	10	118,61,92,61,114,102,46,72,244,1151,	0,585,761,976,1157,1454,13502,15303,15895,16656,
#Deleted in new
chr6_GL000254v2_alt	1970923	1988729	chr6_GL000254v2_alt:1970923-1988729	1	+	1970933	1987065	0	10	117,61,92,61,114,102,46,69,72,1912,	0,584,760,975,1156,1453,13501,13659,15302,15894,
#Deleted in new
chr6_GL000254v2_alt	1970933	1990873	chr6_GL000254v2_alt:1970933-1990873	1	+	1971251	1990693	0	13	389,61,92,61,114,102,46,69,72,244,80,43,355,	0,574,750,965,1146,1443,13491,13649,15292,15884,19011,19183,19585,
#Deleted in new
chr6_GL000254v2_alt	1970933	1988729	chr6_GL000254v2_alt:1970933-1988729	1	+	1970933	1987612	0	11	107,61,92,61,114,102,46,69,72,244,1151,	0,574,750,965,1146,1443,13491,13649,15292,15884,16645,
#Deleted in new
chr6_GL000254v2_alt	1970940	1990873	chr6_GL000254v2_alt:1970940-1990873	0	+	1970940	1970940	8553170	12	100,61,92,61,114,102,46,69,72,80,43,355,	0,567,743,958,1139,1436,13484,13642,15285,19004,19176,19578,
#Deleted in new
chr6_GL000254v2_alt	1970962	1984746	chr6_GL000254v2_alt:1970962-1984746	2	+	1970962	1970962	8553170	8	78,61,92,61,114,102,46,164,	0,545,721,936,1117,1414,13462,13620,
#Deleted in new
chr6_GL000254v2_alt	1970967	1990873	chr6_GL000254v2_alt:1970967-1990873	0	+	1970967	1970967	789624	11	73,61,92,61,114,102,46,69,72,80,757,	0,540,716,931,1112,1409,13457,13615,15258,18977,19149,
#Deleted in new
chr6_GL000254v2_alt	1972447	1990452	chr6_GL000254v2_alt:1972447-1990452	0	+	1972447	1972447	8553170	6	31,46,72,80,43,128,	0,11977,13778,17497,17669,17877,
#Deleted in new
chr6_GL000254v2_alt	1977679	1977946	chr6_GL000254v2_alt:1977679-1977946	7	+	1977679	1977679	16724991	1	267,	0,
#Deleted in new
chr6_GL000254v2_alt	1985871	1990873	chr6_GL000254v2_alt:1985871-1990873	0	+	1985871	1985871	8553170	4	49,72,215,355,	0,354,4073,4647,
#Deleted in new
chr6_GL000254v2_alt	1986968	1990873	chr6_GL000254v2_alt:1986968-1990873	0	+	1986968	1986968	8553170	3	93,79,757,	0,2977,3148,
#Deleted in new
chr6_GL000254v2_alt	1991088	1995335	chr6_GL000254v2_alt:1991088-1995335	0	+	1991088	1991088	8553170	4	265,209,89,20,	0,2712,3955,4227,
#Deleted in new
chr6_GL000254v2_alt	1991104	1997159	chr6_GL000254v2_alt:1991104-1997159	0	+	1991104	1991104	8553170	6	249,402,107,201,70,308,	0,2503,3939,4211,5593,5747,
#Deleted in new
chr6_GL000254v2_alt	1991122	1997159	chr6_GL000254v2_alt:1991122-1997159	3	+	1991281	1996965	789624	6	231,402,89,201,70,308,	0,2485,3921,4193,5575,5729,
#Deleted in new
chr6_GL000254v2_alt	1991175	1996763	chr6_GL000254v2_alt:1991175-1996763	0	+	1991175	1991175	8553170	3	178,201,66,	0,4140,5522,
#Deleted in new
chr6_GL000254v2_alt	1991213	1997159	chr6_GL000254v2_alt:1991213-1997159	1	+	1991281	1996965	789624	5	140,89,201,70,308,	0,3830,4102,5484,5638,
#Deleted in new
chr6_GL000254v2_alt	1991235	1993963	chr6_GL000254v2_alt:1991235-1993963	0	+	1991235	1991235	8553170	3	118,241,356,	0,420,2372,
#Deleted in new
chr6_GL000254v2_alt	1991470	1997159	chr6_GL000254v2_alt:1991470-1997159	0	+	1991470	1996965	789624	6	426,402,89,201,70,308,	0,2137,3573,3845,5227,5381,
#Deleted in new
chr6_GL000254v2_alt	1995103	1997159	chr6_GL000254v2_alt:1995103-1997159	0	+	1995103	1995103	8553170	3	29,201,462,	0,212,1594,
#Deleted in new
chr6_GL000254v2_alt	1997168	2006061	chr6_GL000254v2_alt:1997168-2006061	1	-	1997291	2005934	789624	12	252,174,162,163,68,119,163,141,153,99,211,228,	0,1616,2085,2345,3108,3301,3507,3862,6381,6645,6941,8665,
#Deleted in new
chr6_GL000254v2_alt	1997168	2017114	chr6_GL000254v2_alt:1997168-2017114	3	-	1997291	2016918	789624	20	252,174,162,163,68,119,163,141,153,99,211,116,111,192,204,255,57,163,239,403,	0,1616,2085,2345,3108,3301,3507,3862,6381,6645,6941,9536,9820,11710,11980,12388,17318,17698,17944,19543,
#Deleted in new
chr6_GL000254v2_alt	2003550	2004655	chr6_GL000254v2_alt:2003550-2004655	0	-	2003550	2003550	8553170	3	152,99,546,	0,263,559,
#Deleted in new
chr6_GL000254v2_alt	2009207	2017065	chr6_GL000254v2_alt:2009207-2017065	0	-	2009207	2017059	789624	6	145,255,57,163,239,33,	0,349,5279,5659,5905,7825,
#Deleted in new
chr6_GL000254v2_alt	2020465	2031972	chr6_GL000254v2_alt:2020465-2031972	3	-	2021345	2030095	789624	3	900,211,3488,	0,2790,8019,
#Deleted in new
chr6_GL000254v2_alt	2020465	2031293	chr6_GL000254v2_alt:2020465-2031293	1	-	2021345	2030095	789624	4	900,211,1639,103,	0,2790,8019,10725,
#Deleted in new
chr6_GL000254v2_alt	2020465	2031235	chr6_GL000254v2_alt:2020465-2031235	0	-	2020465	2020465	8553170	3	900,211,45,	0,2790,10725,
#Deleted in new
chr6_GL000254v2_alt	2020465	2031270	chr6_GL000254v2_alt:2020465-2031270	0	-	2020465	2020465	8553170	4	900,211,137,80,	0,2790,8019,10725,
#Deleted in new
chr6_GL000254v2_alt	2032123	2034800	chr6_GL000254v2_alt:2032123-2034800	0	-	2032737	2034800	789624	4	896,177,197,131,	0,1229,2000,2546,
#Deleted in new
chr6_GL000254v2_alt	2032123	2035497	chr6_GL000254v2_alt:2032123-2035497	3	-	2032737	2035051	789624	5	896,177,197,440,45,	0,1229,2000,2795,3329,
#Deleted in new
chr6_GL000254v2_alt	2032123	2035053	chr6_GL000254v2_alt:2032123-2035053	1	-	2032737	2035051	789624	3	896,197,135,	0,2000,2795,
#Deleted in new
chr6_GL000254v2_alt	2032123	2035044	chr6_GL000254v2_alt:2032123-2035044	0	-	2032123	2032123	789624	3	896,177,126,	0,1229,2795,
#Deleted in new
chr6_GL000254v2_alt	2032123	2035051	chr6_GL000254v2_alt:2032123-2035051	0	-	2032123	2032123	8553170	2	896,133,	0,2795,
#Deleted in new
chr6_GL000254v2_alt	2032123	2035063	chr6_GL000254v2_alt:2032123-2035063	0	-	2032123	2032123	8553170	3	896,219,145,	0,1978,2795,
#Deleted in new
chr6_GL000254v2_alt	2032123	2034430	chr6_GL000254v2_alt:2032123-2034430	0	-	2032123	2032123	8553170	2	896,307,	0,2000,
#Deleted in new
chr6_GL000254v2_alt	2032123	2035079	chr6_GL000254v2_alt:2032123-2035079	0	-	2032123	2032123	789624	4	896,177,219,161,	0,1229,1978,2795,
#Deleted in new
chr6_GL000254v2_alt	2032126	2035385	chr6_GL000254v2_alt:2032126-2035385	1	-	2032737	2035051	789624	4	893,177,197,467,	0,1226,1997,2792,
#Deleted in new
chr6_GL000254v2_alt	2040881	2041611	chr6_GL000254v2_alt:2040881-2041611	7	-	2040881	2040881	16724991	1	730,	0,
#Deleted in new
chr6_GL000254v2_alt	2043882	2061964	chr6_GL000254v2_alt:2043882-2061964	3	-	2044540	2059250	0	15	826,111,126,183,120,2478,71,792,93,60,1481,70,381,139,645,	0,2746,2945,3297,3611,3814,7576,7758,11604,11859,12066,13840,13995,15232,17437,
#Deleted in new
chr6_GL000254v2_alt	2044390	2048157	chr6_GL000254v2_alt:2044390-2048157	0	-	2044390	2044390	8553170	5	318,111,126,183,664,	0,2238,2437,2789,3103,
#Deleted in new
chr6_GL000254v2_alt	2047142	2057259	chr6_GL000254v2_alt:2047142-2057259	3	+	2047142	2047142	789624	3	127,114,497,	0,9244,9620,
#Deleted in new
chr6_GL000254v2_alt	2049523	2055989	chr6_GL000254v2_alt:2049523-2055989	0	-	2049523	2055989	789624	5	651,71,93,60,41,	0,1935,5963,6218,6425,
#Deleted in new
chr6_GL000254v2_alt	2049657	2051760	chr6_GL000254v2_alt:2049657-2051760	0	-	2049657	2049657	8553170	2	517,302,	0,1801,
#Deleted in new
chr6_GL000254v2_alt	2055546	2056006	chr6_GL000254v2_alt:2055546-2056006	0	-	2055546	2055546	8553170	3	30,60,58,	0,195,402,
#Deleted in new
chr6_GL000254v2_alt	2057282	2061150	chr6_GL000254v2_alt:2057282-2061150	1	-	2057779	2059250	789624	7	147,70,20,107,153,139,194,	0,440,595,618,823,1832,3674,
#Deleted in new
chr6_GL000254v2_alt	2057907	2061250	chr6_GL000254v2_alt:2057907-2061250	0	-	2057907	2059250	789624	3	351,139,92,	0,1207,3251,
#Deleted in new
chr6_GL000254v2_alt	2058014	2061522	chr6_GL000254v2_alt:2058014-2061522	0	-	2058014	2059250	789624	3	244,139,199,	0,1100,3309,
#Deleted in new
chr6_GL000254v2_alt	2058054	2061196	chr6_GL000254v2_alt:2058054-2061196	0	-	2058054	2059250	789624	3	204,139,240,	0,1060,2902,
#Deleted in new
chr6_GL000254v2_alt	2064275	2069501	chr6_GL000254v2_alt:2064275-2069501	3	+	2064581	2068472	0	4	363,109,111,2087,	0,2336,2717,3139,
#Deleted in new
chr6_GL000254v2_alt	2065648	2069501	chr6_GL000254v2_alt:2065648-2069501	1	+	2067042	2068472	789624	4	325,109,111,2087,	0,963,1344,1766,
#Deleted in new
chr6_GL000254v2_alt	2065741	2069501	chr6_GL000254v2_alt:2065741-2069501	1	+	2066334	2068472	789624	4	596,109,111,2087,	0,870,1251,1673,
#Deleted in new
chr6_GL000254v2_alt	2065773	2069501	chr6_GL000254v2_alt:2065773-2069501	1	+	2067042	2068472	789624	4	516,109,111,2087,	0,838,1219,1641,
#Deleted in new
chr6_GL000254v2_alt	2071783	2085408	chr6_GL000254v2_alt:2071783-2085408	3	-	2072190	2085408	789624	9	437,165,138,46,182,153,96,120,144,	0,2313,2719,2973,3210,12449,12787,12970,13481,
#Deleted in new
chr6_GL000254v2_alt	2071783	2084928	chr6_GL000254v2_alt:2071783-2084928	0	-	2071783	2071783	8553170	7	437,165,138,419,153,96,175,	0,2313,2719,2973,12449,12787,12970,
#Deleted in new
chr6_GL000254v2_alt	2074993	2085408	chr6_GL000254v2_alt:2074993-2085408	0	-	2074993	2085408	789624	5	182,153,96,120,144,	0,9239,9577,9760,10271,
#Deleted in new
chr6_GL000254v2_alt	2075065	2084869	chr6_GL000254v2_alt:2075065-2084869	0	-	2075065	2075065	8553170	3	110,153,299,	0,9167,9505,
#Deleted in new
chr6_GL000254v2_alt	2075141	2085408	chr6_GL000254v2_alt:2075141-2085408	0	-	2075141	2085408	789624	5	34,153,96,120,144,	0,9091,9429,9612,10123,
#Deleted in new
chr6_GL000254v2_alt	2080378	2080489	chr6_GL000254v2_alt:2080378-2080489	3	-	2080378	2080378	8553170	1	111,	0,
#Deleted in new
chr6_GL000254v2_alt	2084232	2085408	chr6_GL000254v2_alt:2084232-2085408	0	-	2084232	2084232	8553170	4	153,96,120,144,	0,338,521,1032,
#Deleted in new
chr6_GL000254v2_alt	2084235	2084666	chr6_GL000254v2_alt:2084235-2084666	0	-	2084235	2084666	789624	2	150,96,	0,335,
#Deleted in new
chr6_GL000254v2_alt	2084250	2085408	chr6_GL000254v2_alt:2084250-2085408	0	-	2084250	2085408	789624	4	135,96,120,144,	0,320,503,1014,
#Deleted in new
chr6_GL000254v2_alt	2084328	2085614	chr6_GL000254v2_alt:2084328-2085614	0	-	2084328	2084328	8553170	4	57,96,120,350,	0,242,425,936,
#Deleted in new
chr6_GL000254v2_alt	2084329	2085408	chr6_GL000254v2_alt:2084329-2085408	0	-	2084329	2085408	789624	4	56,96,120,144,	0,241,424,935,
#Deleted in new
chr6_GL000254v2_alt	2084583	2085408	chr6_GL000254v2_alt:2084583-2085408	0	-	2084583	2085408	789624	3	83,120,144,	0,170,681,
#Deleted in new
chr6_GL000254v2_alt	2085428	2085614	chr6_GL000254v2_alt:2085428-2085614	0	-	2085428	2085428	8553170	1	186,	0,
#Deleted in new
chr6_GL000254v2_alt	2183600	2192238	chr6_GL000254v2_alt:2183600-2192238	3	-	2183600	2183600	789624	3	494,113,192,	0,7515,8446,
#Deleted in new
chr6_GL000254v2_alt	2208407	2208710	chr6_GL000254v2_alt:2208407-2208710	3	+	2208407	2208407	8553170	1	303,	0,
#Deleted in new
chr6_GL000254v2_alt	2211141	2220070	chr6_GL000254v2_alt:2211141-2220070	3	-	2211141	2211141	8553170	2	2843,1141,	0,7788,
#Deleted in new
chr6_GL000254v2_alt	2225123	2236239	chr6_GL000254v2_alt:2225123-2236239	0	+	2225123	2225123	8553170	7	151,127,103,229,148,100,87,	0,7713,7933,8227,9998,10405,11029,
#Deleted in new
chr6_GL000254v2_alt	2225176	2236239	chr6_GL000254v2_alt:2225176-2236239	3	+	2232878	2236239	789624	9	98,173,56,127,103,229,148,100,87,	0,3510,4597,7660,7880,8174,9945,10352,10976,
#Deleted in new
chr6_GL000254v2_alt	2225443	2228856	chr6_GL000254v2_alt:2225443-2228856	0	+	2225443	2225443	8553170	2	76,170,	0,3243,
#Deleted in new
chr6_GL000254v2_alt	2227094	2235204	chr6_GL000254v2_alt:2227094-2235204	0	+	2232878	2235204	789624	5	38,127,103,229,83,	0,5742,5962,6256,8027,
#Deleted in new
chr6_GL000254v2_alt	2227239	2235147	chr6_GL000254v2_alt:2227239-2235147	0	+	2232878	2235147	789624	5	75,127,103,229,26,	0,5597,5817,6111,7882,
#Deleted in new
chr6_GL000254v2_alt	2227927	2236239	chr6_GL000254v2_alt:2227927-2236239	0	+	2232878	2236239	789624	8	151,173,127,103,229,148,100,87,	0,759,4909,5129,5423,7194,7601,8225,
#Deleted in new
chr6_GL000254v2_alt	2228211	2236239	chr6_GL000254v2_alt:2228211-2236239	0	+	2232878	2236239	789624	9	83,173,56,127,103,229,148,100,87,	0,475,1562,4625,4845,5139,6910,7317,7941,
#Deleted in new
chr6_GL000254v2_alt	2228501	2233579	chr6_GL000254v2_alt:2228501-2233579	0	+	2232878	2233579	789624	5	358,56,127,103,229,	0,1272,4335,4555,4849,
#Deleted in new
chr6_GL000254v2_alt	2228606	2233161	chr6_GL000254v2_alt:2228606-2233161	0	+	2232878	2233161	789624	3	253,127,105,	0,4230,4450,
#Deleted in new
chr6_GL000254v2_alt	2228704	2236239	chr6_GL000254v2_alt:2228704-2236239	0	+	2228704	2228704	8553170	6	155,127,103,229,148,87,	0,4132,4352,4646,6417,7448,
#Deleted in new
chr6_GL000254v2_alt	2228714	2236239	chr6_GL000254v2_alt:2228714-2236239	0	+	2232878	2236239	789624	7	145,127,103,229,148,100,87,	0,4122,4342,4636,6407,6814,7438,
#Deleted in new
chr6_GL000254v2_alt	2229374	2235591	chr6_GL000254v2_alt:2229374-2235591	0	+	2232878	2235591	789624	6	129,127,103,229,148,63,	0,3462,3682,3976,5747,6154,
#Deleted in new
chr6_GL000254v2_alt	2232537	2236239	chr6_GL000254v2_alt:2232537-2236239	0	+	2232878	2236239	789624	6	426,103,229,148,100,87,	0,519,813,2584,2991,3615,
#Deleted in new
chr6_GL000254v2_alt	2235290	2236239	chr6_GL000254v2_alt:2235290-2236239	0	+	2235290	2235290	8553170	2	338,87,	0,862,
#Deleted in new
chr6_GL000254v2_alt	2235575	2236239	chr6_GL000254v2_alt:2235575-2236239	0	+	2235575	2236239	789624	2	53,87,	0,577,
#Deleted in new
chr6_GL000254v2_alt	2252330	2258253	chr6_GL000254v2_alt:2252330-2258253	3	+	2253183	2258130	0	14	220,140,105,132,97,89,112,69,84,133,131,48,79,296,	0,850,1251,1748,2481,2669,2974,3247,3500,3830,4144,4926,5125,5627,
#Deleted in new
chr6_GL000254v2_alt	2252367	2258253	chr6_GL000254v2_alt:2252367-2258253	1	+	2253183	2258130	0	14	158,140,105,132,97,89,112,69,84,133,131,48,79,296,	0,813,1214,1711,2444,2632,2937,3210,3463,3793,4107,4889,5088,5590,
#Deleted in new
chr6_GL000254v2_alt	2252369	2254781	chr6_GL000254v2_alt:2252369-2254781	0	+	2253183	2254781	789624	5	181,140,105,132,40,	0,811,1212,1709,2372,
#Deleted in new
chr6_GL000254v2_alt	2252388	2270615	chr6_GL000254v2_alt:2252388-2270615	0	+	2252388	2252388	8553170	41	162,140,105,132,97,89,112,69,84,445,48,79,1227,82,101,122,67,98,107,120,112,89,91,128,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,351,	0,792,1193,1690,2423,2611,2916,3189,3442,3772,4868,5067,5569,6914,7113,7504,7739,7902,8627,8854,9444,10572,11503,11851,12095,12430,12827,12992,13351,13687,13878,14212,14468,14660,14866,15115,16121,17041,17311,17647,17876,
#Deleted in new
chr6_GL000254v2_alt	2253588	2256540	chr6_GL000254v2_alt:2253588-2256540	0	+	2253588	2253588	8553170	8	98,132,97,89,112,69,463,66,	0,490,1223,1411,1716,1989,2242,2886,
#Deleted in new
chr6_GL000254v2_alt	2256097	2258253	chr6_GL000254v2_alt:2256097-2258253	0	+	2256097	2256097	8553170	3	508,278,296,	0,1159,1860,
#Deleted in new
chr6_GL000254v2_alt	2256369	2258253	chr6_GL000254v2_alt:2256369-2258253	0	+	2256369	2256369	8553170	4	236,48,79,296,	0,887,1086,1588,
#Deleted in new
chr6_GL000254v2_alt	2258351	2270615	chr6_GL000254v2_alt:2258351-2270615	3	+	2258983	2270366	789624	29	833,82,101,122,67,98,82,120,112,89,91,128,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,351,	0,951,1150,1541,1776,1939,2664,2891,3481,4609,5540,5888,6132,6467,6864,7029,7388,7724,7915,8249,8505,8697,8903,9152,10158,11078,11348,11684,11913,
#Deleted in new
chr6_GL000254v2_alt	2258351	2270612	chr6_GL000254v2_alt:2258351-2270612	3	+	2258983	2270366	789624	29	833,82,101,122,67,98,82,120,112,89,91,122,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,348,	0,951,1150,1541,1776,1939,2664,2891,3481,4609,5540,5894,6132,6467,6864,7029,7388,7724,7915,8249,8505,8697,8903,9152,10158,11078,11348,11684,11913,
#Deleted in new
chr6_GL000254v2_alt	2258398	2261937	chr6_GL000254v2_alt:2258398-2261937	0	+	2258983	2261937	789624	10	93,233,82,101,122,67,98,82,120,105,	0,553,904,1103,1494,1729,1892,2617,2844,3434,
#Deleted in new
chr6_GL000254v2_alt	2258412	2261944	chr6_GL000254v2_alt:2258412-2261944	0	+	2258412	2258412	8553170	9	79,82,101,122,67,98,82,120,112,	0,890,1089,1480,1715,1878,2603,2830,3420,
#Deleted in new
chr6_GL000254v2_alt	2258477	2270612	chr6_GL000254v2_alt:2258477-2270612	1	+	2258558	2270366	789624	30	139,233,82,101,122,67,98,82,120,112,89,91,128,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,348,	0,474,825,1024,1415,1650,1813,2538,2765,3355,4483,5414,5762,6006,6341,6738,6903,7262,7598,7789,8123,8379,8571,8777,9026,10032,10952,11222,11558,11787,
#Deleted in new
chr6_GL000254v2_alt	2258528	2259563	chr6_GL000254v2_alt:2258528-2259563	0	+	2258983	2259563	789624	4	88,228,82,62,	0,428,774,973,
#Deleted in new
chr6_GL000254v2_alt	2260566	2261899	chr6_GL000254v2_alt:2260566-2261899	0	+	2260566	2260566	8553170	3	531,120,67,	0,676,1266,
#Deleted in new
chr6_GL000254v2_alt	2262897	2270615	chr6_GL000254v2_alt:2262897-2270615	0	+	2262897	2262897	8553170	19	1085,128,104,82,77,76,103,71,126,173,69,79,128,153,207,112,176,129,351,	0,1342,1586,1921,2318,2483,2842,3178,3369,3635,3959,4151,4357,4606,5612,6532,6802,7138,7367,
#Deleted in new
chr6_GL000254v2_alt	2263959	2270615	chr6_GL000254v2_alt:2263959-2270615	0	+	2263959	2263959	8553170	18	23,128,104,82,77,76,103,126,105,69,79,128,153,207,112,176,129,351,	0,280,524,859,1256,1421,1780,2307,2641,2897,3089,3295,3544,4550,5470,5740,6076,6305,
#Deleted in new
chr6_GL000254v2_alt	2266280	2269830	chr6_GL000254v2_alt:2266280-2269830	0	+	2266280	2266280	8553170	8	112,105,69,79,128,153,211,131,	0,320,576,768,974,1223,2229,3419,
#Deleted in new
chr6_GL000254v2_alt	2266733	2267656	chr6_GL000254v2_alt:2266733-2267656	0	+	2266733	2266733	8553170	4	192,79,128,153,	0,315,521,770,
#Deleted in new
chr6_GL000254v2_alt	2267358	2270615	chr6_GL000254v2_alt:2267358-2270615	0	+	2267358	2267358	8553170	6	24,1213,112,176,129,351,	0,145,2071,2341,2677,2906,
#Deleted in new
chr6_GL000254v2_alt	2275483	2276306	chr6_GL000254v2_alt:2275483-2276306	3	-	2275618	2276227	789624	3	222,89,140,	0,354,683,
#Deleted in new
chr6_GL000254v2_alt	2275483	2276240	chr6_GL000254v2_alt:2275483-2276240	0	-	2275483	2275483	8553170	2	222,403,	0,354,
#Deleted in new
chr6_GL000254v2_alt	2276749	2276841	chr6_GL000254v2_alt:2276749-2276841	3	-	2276749	2276749	8553170	1	92,	0,
#Deleted in new
chr6_GL000254v2_alt	2285104	2295265	chr6_GL000254v2_alt:2285104-2295265	3	+	2285132	2295265	789624	2	110,2585,	0,7576,
#Deleted in new
chr6_GL000254v2_alt	2290112	2290493	chr6_GL000254v2_alt:2290112-2290493	3	-	2290112	2290112	8553170	1	381,	0,
#Deleted in new
chr6_GL000254v2_alt	2327855	2334046	chr6_GL000254v2_alt:2327855-2334046	3	+	2328096	2332337	789624	3	302,1445,1904,	0,2524,4287,
#Deleted in new
chr6_GL000254v2_alt	2327855	2330532	chr6_GL000254v2_alt:2327855-2330532	0	+	2327855	2327855	8553170	2	444,153,	0,2524,
#Deleted in new
chr6_GL000254v2_alt	2327910	2332780	chr6_GL000254v2_alt:2327910-2332780	1	+	2328096	2332337	789624	4	247,463,532,638,	0,2469,3382,4232,
#Deleted in new
chr6_GL000254v2_alt	2354612	2379541	chr6_GL000254v2_alt:2354612-2379541	3	+	2354612	2354612	8553170	4	303,4599,386,731,	0,15028,21726,24198,
#Deleted in new
chr6_GL000254v2_alt	2374050	2378847	chr6_GL000254v2_alt:2374050-2378847	0	+	2374050	2374050	8553170	3	189,386,37,	0,2288,4760,
#Deleted in new
chr6_GL000254v2_alt	2397574	2404006	chr6_GL000254v2_alt:2397574-2404006	7	+	2397574	2397574	16724991	4	82,417,693,483,	0,650,2759,5949,
#Deleted in new
chr6_GL000254v2_alt	2398331	2403992	chr6_GL000254v2_alt:2398331-2403992	4	+	2398331	2398331	16724991	3	310,1201,469,	0,1494,5192,
#Deleted in new
chr6_GL000254v2_alt	2398454	2400906	chr6_GL000254v2_alt:2398454-2400906	5	+	2398454	2398454	16724991	2	187,573,	0,1879,
#Deleted in new
chr6_GL000254v2_alt	2427126	2427226	chr6_GL000254v2_alt:2427126-2427226	3	+	2427126	2427126	8553170	1	100,	0,
#Deleted in new
chr6_GL000254v2_alt	2455339	2456676	chr6_GL000254v2_alt:2455339-2456676	3	-	2455497	2456672	789624	2	1069,71,	0,1266,
#Deleted in new
chr6_GL000254v2_alt	2458866	2462934	chr6_GL000254v2_alt:2458866-2462934	0	+	2458866	2458866	8553170	2	142,3682,	0,386,
#Deleted in new
chr6_GL000254v2_alt	2458941	2461413	chr6_GL000254v2_alt:2458941-2461413	0	+	2458941	2458941	8553170	2	67,210,	0,2262,
#Deleted in new
chr6_GL000254v2_alt	2458947	2484175	chr6_GL000254v2_alt:2458947-2484175	3	+	2473768	2484069	789624	6	61,164,77,30,124,398,	0,10843,14757,23619,23845,24830,
#Deleted in new
chr6_GL000254v2_alt	2458947	2484175	chr6_GL000254v2_alt:2458947-2484175	0	+	2458947	2458947	8553170	2	61,398,	0,24830,
#Deleted in new
chr6_GL000254v2_alt	2459206	2464559	chr6_GL000254v2_alt:2459206-2464559	3	-	2460138	2464532	789624	2	2437,112,	0,5241,
#Deleted in new
chr6_GL000254v2_alt	2481670	2483487	chr6_GL000254v2_alt:2481670-2483487	3	-	2482087	2483163	789624	2	773,379,	0,1438,
#Deleted in new
chr6_GL000254v2_alt	2482495	2484175	chr6_GL000254v2_alt:2482495-2484175	0	+	2482495	2482495	8553170	2	101,398,	0,1282,
#Deleted in new
chr6_GL000254v2_alt	2482556	2484174	chr6_GL000254v2_alt:2482556-2484174	1	+	2482556	2484069	789624	3	40,124,397,	0,236,1221,
#Deleted in new
chr6_GL000254v2_alt	2484855	2485042	chr6_GL000254v2_alt:2484855-2485042	7	+	2484855	2484855	16724991	1	187,	0,
#Deleted in new
chr6_GL000254v2_alt	2486566	2501938	chr6_GL000254v2_alt:2486566-2501938	1	-	2486719	2501183	789624	18	278,172,152,102,189,137,46,113,107,111,150,111,136,164,304,214,67,405,	0,524,823,2248,2446,2727,3009,3257,5958,6171,7620,8009,8279,8513,12060,14309,14601,14967,
#Deleted in new
chr6_GL000254v2_alt	2486566	2502350	chr6_GL000254v2_alt:2486566-2502350	1	-	2486719	2501183	789624	16	278,172,152,102,189,137,107,111,150,111,136,164,304,214,133,35,	0,524,823,2248,2446,2727,5958,6171,7620,8009,8279,8513,12060,14309,14601,15749,
#Deleted in new
chr6_GL000254v2_alt	2486566	2489364	chr6_GL000254v2_alt:2486566-2489364	0	-	2486719	2489364	789624	6	278,130,152,102,189,71,	0,524,823,2248,2446,2727,
#Deleted in new
chr6_GL000254v2_alt	2486566	2502362	chr6_GL000254v2_alt:2486566-2502362	1	-	2486719	2501183	789624	18	278,172,152,102,189,137,46,113,107,111,150,111,136,164,304,214,67,47,	0,524,823,2248,2446,2727,3009,3257,5958,6171,7620,8009,8279,8513,12060,14309,14601,15749,
#Deleted in new
chr6_GL000254v2_alt	2486567	2501938	chr6_GL000254v2_alt:2486567-2501938	1	-	2486719	2501749	789624	19	277,172,152,102,189,137,46,113,107,111,150,111,136,164,304,214,49,15,405,	0,523,822,2247,2445,2726,3008,3256,5957,6170,7619,8008,8278,8512,12059,14308,14600,14652,14966,
#Deleted in new
chr6_GL000254v2_alt	2487187	2489430	chr6_GL000254v2_alt:2487187-2489430	0	-	2487187	2487187	8553170	3	75,387,115,	0,1627,2128,
#Deleted in new
chr6_GL000254v2_alt	2487223	2489243	chr6_GL000254v2_alt:2487223-2489243	0	-	2487223	2487223	8553170	4	39,152,160,231,	0,166,1533,1789,
#Deleted in new
chr6_GL000254v2_alt	2493280	2502340	chr6_GL000254v2_alt:2493280-2502340	0	-	2493280	2493280	8553170	3	509,67,25,	0,7887,9035,
#Deleted in new
chr6_GL000254v2_alt	2494225	2501235	chr6_GL000254v2_alt:2494225-2501235	0	-	2494225	2501183	789624	7	111,111,136,164,304,106,68,	0,350,620,854,4401,6650,6942,
#Deleted in new
chr6_GL000254v2_alt	2494987	2498882	chr6_GL000254v2_alt:2494987-2498882	0	-	2494987	2494987	8553170	2	256,256,	0,3639,
#Deleted in new
chr6_GL000254v2_alt	2495212	2502231	chr6_GL000254v2_alt:2495212-2502231	0	-	2495212	2501183	789624	5	31,304,214,67,84,	0,3414,5663,5955,6935,
#Deleted in new
chr6_GL000254v2_alt	2498702	2502336	chr6_GL000254v2_alt:2498702-2502336	0	-	2498702	2501183	789624	5	228,214,67,116,21,	0,2173,2465,2831,3613,
#Deleted in new
chr6_GL000254v2_alt	2498724	2502218	chr6_GL000254v2_alt:2498724-2502218	0	-	2498724	2501183	789624	4	206,359,116,59,	0,2151,2809,3435,
#Deleted in new
chr6_GL000254v2_alt	2498804	2501937	chr6_GL000254v2_alt:2498804-2501937	0	-	2498804	2501183	789624	4	126,214,67,431,	0,2071,2363,2702,
#Deleted in new
chr6_GL000254v2_alt	2498858	2502354	chr6_GL000254v2_alt:2498858-2502354	2	-	2498858	2501183	789624	3	72,359,39,	0,2017,3457,
#Deleted in new
chr6_GL000254v2_alt	2500376	2501234	chr6_GL000254v2_alt:2500376-2501234	0	-	2500376	2500376	8553170	2	713,67,	0,791,
#Deleted in new
chr6_GL000254v2_alt	2500903	2501921	chr6_GL000254v2_alt:2500903-2501921	0	-	2500903	2500903	8553170	3	186,133,388,	0,264,630,
#Deleted in new
chr6_GL000254v2_alt	2502700	2508330	chr6_GL000254v2_alt:2502700-2508330	3	+	2503618	2506831	789624	4	171,811,559,1740,	0,345,2860,3890,
#Deleted in new
chr6_GL000254v2_alt	2502742	2508330	chr6_GL000254v2_alt:2502742-2508330	1	+	2503618	2506831	789624	4	129,565,559,1740,	0,549,2818,3848,
#Deleted in new
chr6_GL000254v2_alt	2505597	2507121	chr6_GL000254v2_alt:2505597-2507121	0	+	2505597	2505597	8553170	3	94,255,531,	0,267,993,
#Deleted in new
chr6_GL000254v2_alt	2508451	2510393	chr6_GL000254v2_alt:2508451-2510393	1	-	2508715	2510292	789624	4	531,159,131,342,	0,793,1236,1600,
#Deleted in new
chr6_GL000254v2_alt	2508451	2514827	chr6_GL000254v2_alt:2508451-2514827	3	-	2508715	2514754	789624	5	531,159,131,121,478,	0,793,1236,1600,5898,
#Deleted in new
chr6_GL000254v2_alt	2508451	2509409	chr6_GL000254v2_alt:2508451-2509409	0	-	2508451	2508451	8553170	2	531,165,	0,793,
#Deleted in new
chr6_GL000254v2_alt	2509816	2514792	chr6_GL000254v2_alt:2509816-2514792	0	-	2509816	2509816	8553170	2	356,443,	0,4533,
#Deleted in new
chr6_GL000254v2_alt	2514695	2516718	chr6_GL000254v2_alt:2514695-2516718	3	+	2514695	2516718	789624	5	30,30,24,8,16,	0,161,450,1673,2007,
#Deleted in new
chr6_GL000254v2_alt	2517867	2522038	chr6_GL000254v2_alt:2517867-2522038	3	-	2517867	2517867	789624	3	299,33,261,	0,503,3910,
#Deleted in new
chr6_GL000254v2_alt	2541917	2548174	chr6_GL000254v2_alt:2541917-2548174	3	+	2541917	2541917	789624	2	123,1597,	0,4660,
#Deleted in new
chr6_GL000254v2_alt	2542295	2547428	chr6_GL000254v2_alt:2542295-2547428	0	+	2542295	2542295	8553170	2	44,851,	0,4282,
#Deleted in new
chr6_GL000254v2_alt	2544327	2546125	chr6_GL000254v2_alt:2544327-2546125	3	-	2544327	2544327	8553170	2	474,43,	0,1755,
#Deleted in new
chr6_GL000254v2_alt	2546220	2547207	chr6_GL000254v2_alt:2546220-2547207	0	+	2546220	2546220	8553170	2	41,630,	0,357,
#Deleted in new
chr6_GL000254v2_alt	2611477	2614805	chr6_GL000254v2_alt:2611477-2614805	3	-	2611896	2614790	789624	8	424,48,51,120,276,276,270,88,	0,588,743,1215,1456,2319,2840,3240,
#Deleted in new
chr6_GL000254v2_alt	2611477	2614812	chr6_GL000254v2_alt:2611477-2614812	1	-	2611799	2614790	789624	6	414,120,276,276,270,95,	0,1215,1456,2319,2840,3240,
#Deleted in new
chr6_GL000254v2_alt	2611477	2614805	chr6_GL000254v2_alt:2611477-2614805	1	-	2611896	2614790	789624	7	424,48,120,276,276,270,88,	0,588,1215,1456,2319,2840,3240,
#Deleted in new
chr6_GL000254v2_alt	2611477	2614849	chr6_GL000254v2_alt:2611477-2614849	1	-	2611896	2614790	0	8	424,48,33,120,276,276,270,132,	0,588,743,1215,1456,2319,2840,3240,
#Deleted in new
chr6_GL000254v2_alt	2611477	2612394	chr6_GL000254v2_alt:2611477-2612394	0	-	2611477	2611477	8553170	2	424,329,	0,588,
#Deleted in new
chr6_GL000254v2_alt	2611477	2614769	chr6_GL000254v2_alt:2611477-2614769	0	-	2611477	2611477	8553170	6	424,48,33,120,276,973,	0,588,743,1215,1456,2319,
#Deleted in new
chr6_GL000254v2_alt	2611477	2613146	chr6_GL000254v2_alt:2611477-2613146	0	-	2611477	2611477	8553170	4	424,48,592,213,	0,588,743,1456,
#Deleted in new
chr6_GL000254v2_alt	2611477	2614824	chr6_GL000254v2_alt:2611477-2614824	0	-	2614002	2614790	789624	8	424,48,33,120,276,259,270,107,	0,588,743,1215,1456,2319,2840,3240,
#Deleted in new
chr6_GL000254v2_alt	2612066	2614790	chr6_GL000254v2_alt:2612066-2614790	1	-	2612066	2614052	789624	8	47,33,120,276,276,100,51,73,	0,154,626,867,1730,2251,2470,2651,
#Deleted in new
chr6_GL000254v2_alt	2612087	2613021	chr6_GL000254v2_alt:2612087-2613021	1	-	2612087	2613021	789624	3	26,33,88,	0,133,846,
#Deleted in new
chr6_GL000254v2_alt	2612218	2697387	chr6_GL000254v2_alt:2612218-2697387	3	-	2612218	2697387	789624	3	35,117,88,	0,84860,85081,
#Deleted in new
chr6_GL000254v2_alt	2612933	2614792	chr6_GL000254v2_alt:2612933-2614792	0	-	2612933	2612933	8553170	5	276,69,276,270,75,	0,422,863,1384,1784,
#Deleted in new
chr6_GL000254v2_alt	2612937	2614788	chr6_GL000254v2_alt:2612937-2614788	0	-	2612937	2614788	789624	5	118,47,276,270,71,	0,225,859,1380,1780,
#Deleted in new
chr6_GL000254v2_alt	2612944	2614849	chr6_GL000254v2_alt:2612944-2614849	0	-	2612944	2612944	8553170	3	265,276,532,	0,852,1373,
#Deleted in new
chr6_GL000254v2_alt	2613822	2614809	chr6_GL000254v2_alt:2613822-2614809	0	-	2613822	2613822	8553170	2	765,92,	0,895,
#Deleted in new
chr6_GL000254v2_alt	2618276	2621449	chr6_GL000254v2_alt:2618276-2621449	7	+	2618276	2618276	16724991	1	3173,	0,
#Deleted in new
chr6_GL000254v2_alt	2623011	2624211	chr6_GL000254v2_alt:2623011-2624211	7	+	2623011	2623011	16724991	1	1200,	0,
#Deleted in new
chr6_GL000254v2_alt	2630193	2631648	chr6_GL000254v2_alt:2630193-2631648	7	-	2630193	2630193	16724991	1	1455,	0,
#Deleted in new
chr6_GL000254v2_alt	2650517	2651252	chr6_GL000254v2_alt:2650517-2651252	7	-	2650517	2650517	16724991	2	233,73,	0,662,
#Deleted in new
chr6_GL000254v2_alt	2695843	2698387	chr6_GL000254v2_alt:2695843-2698387	0	-	2696454	2698387	789624	6	425,48,51,117,276,237,	0,607,761,1235,1456,2307,
#Deleted in new
chr6_GL000254v2_alt	2695843	2699230	chr6_GL000254v2_alt:2695843-2699230	1	-	2696454	2699143	0	8	425,48,33,117,276,276,270,160,	0,607,761,1235,1456,2307,2828,3227,
#Deleted in new
chr6_GL000254v2_alt	2695843	2696778	chr6_GL000254v2_alt:2695843-2696778	0	-	2695843	2695843	8553170	2	425,328,	0,607,
#Deleted in new
chr6_GL000254v2_alt	2695843	2697048	chr6_GL000254v2_alt:2695843-2697048	0	-	2695843	2695843	8553170	3	425,48,444,	0,607,761,
#Deleted in new
chr6_GL000254v2_alt	2697093	2697785	chr6_GL000254v2_alt:2697093-2697785	0	-	2697093	2697093	8553170	2	102,486,	0,206,
#Deleted in new
chr6_GL000254v2_alt	2697153	2699145	chr6_GL000254v2_alt:2697153-2699145	0	-	2697733	2699143	789624	6	42,276,69,276,270,75,	0,146,567,997,1518,1917,
#Deleted in new
chr6_GL000254v2_alt	2697373	2699164	chr6_GL000254v2_alt:2697373-2699164	0	-	2697373	2697373	8553170	3	202,791,94,	0,777,1697,
#Deleted in new
chr6_GL000254v2_alt	2697489	2699173	chr6_GL000254v2_alt:2697489-2699173	0	-	2697489	2699047	789624	3	86,276,502,	0,661,1182,
#Deleted in new
chr6_GL000254v2_alt	2806318	2807782	chr6_GL000254v2_alt:2806318-2807782	0	+	2806318	2806318	8553170	1	1464,	0,
#Deleted in new
chr6_GL000254v2_alt	2806318	2807782	chr6_GL000254v2_alt:2806318-2807782	3	+	2806318	2806318	789624	1	1464,	0,
#Deleted in new
chr6_GL000254v2_alt	2838644	2838746	chr6_GL000254v2_alt:2838644-2838746	3	-	2838644	2838644	8553170	1	102,	0,
#Deleted in new
chr6_GL000254v2_alt	2840039	2853071	chr6_GL000254v2_alt:2840039-2853071	3	+	2840147	2851858	789624	6	178,255,159,279,132,1341,	0,7526,8181,8931,9309,11691,
#Deleted in new
chr6_GL000254v2_alt	2840068	2853071	chr6_GL000254v2_alt:2840068-2853071	1	+	2840147	2851858	789624	6	149,255,288,279,132,1341,	0,7497,8023,8902,9280,11662,
#Deleted in new
chr6_GL000254v2_alt	2847883	2849480	chr6_GL000254v2_alt:2847883-2849480	0	+	2847883	2847883	8553170	3	496,279,132,	0,1087,1465,
#Deleted in new
chr6_GL000254v2_alt	2861431	2862243	chr6_GL000254v2_alt:2861431-2862243	7	-	2861431	2861431	16724991	2	171,327,	0,485,
#Deleted in new
chr6_GL000254v2_alt	2870056	2870636	chr6_GL000254v2_alt:2870056-2870636	7	+	2870056	2870056	16724991	1	580,	0,
#Deleted in new
chr6_GL000254v2_alt	2870659	2872175	chr6_GL000254v2_alt:2870659-2872175	3	+	2870957	2871878	789624	2	469,486,	0,1030,
#Deleted in new
chr6_GL000254v2_alt	2872161	2884387	chr6_GL000254v2_alt:2872161-2884387	1	-	2872376	2882472	0	11	232,148,145,110,132,119,184,93,128,343,499,	0,559,833,1076,2560,5147,6280,8543,8927,10100,11727,
#Deleted in new
chr6_GL000254v2_alt	2872161	2888517	chr6_GL000254v2_alt:2872161-2888517	1	-	2872376	2882472	0	13	232,148,145,110,132,119,184,93,128,343,199,101,105,	0,559,833,1076,2560,5147,6280,8543,8927,10100,11727,15886,16251,
#Deleted in new
chr6_GL000254v2_alt	2872161	2884387	chr6_GL000254v2_alt:2872161-2884387	1	-	2872376	2882472	0	11	232,148,145,110,132,119,184,93,128,213,499,	0,559,833,1076,2560,5147,6280,8543,8927,10100,11727,
#Deleted in new
chr6_GL000254v2_alt	2872161	2882476	chr6_GL000254v2_alt:2872161-2882476	1	-	2872735	2882472	789624	10	232,171,145,110,132,119,184,93,128,215,	0,559,833,1076,2560,5147,6280,8543,8927,10100,
#Deleted in new
chr6_GL000254v2_alt	2872161	2873686	chr6_GL000254v2_alt:2872161-2873686	0	-	2872161	2872161	8553170	4	232,148,145,449,	0,559,833,1076,
#Deleted in new
chr6_GL000254v2_alt	2872161	2877417	chr6_GL000254v2_alt:2872161-2877417	0	-	2873047	2877417	789624	6	232,148,126,110,132,109,	0,559,833,1076,2560,5147,
#Deleted in new
chr6_GL000254v2_alt	2872161	2883956	chr6_GL000254v2_alt:2872161-2883956	0	-	2872161	2872161	8553170	10	232,148,145,110,2706,184,93,128,213,68,	0,559,833,1076,2560,6280,8543,8927,10100,11727,
#Deleted in new
chr6_GL000254v2_alt	2872185	2872877	chr6_GL000254v2_alt:2872185-2872877	0	-	2872185	2872185	8553170	2	506,111,	0,581,
#Deleted in new
chr6_GL000254v2_alt	2872720	2876453	chr6_GL000254v2_alt:2872720-2876453	0	-	2872720	2876453	789624	5	148,145,110,132,26,	0,274,517,2001,3707,
#Deleted in new
chr6_GL000254v2_alt	2873057	2873613	chr6_GL000254v2_alt:2873057-2873613	0	-	2873057	2873057	8553170	2	63,376,	0,180,
#Deleted in new
chr6_GL000254v2_alt	2873215	2884340	chr6_GL000254v2_alt:2873215-2884340	0	-	2873215	2873215	8553170	6	132,132,119,184,213,452,	0,1506,4093,5226,9046,10673,
#Deleted in new
chr6_GL000254v2_alt	2873243	2883920	chr6_GL000254v2_alt:2873243-2883920	0	-	2873243	2882459	789624	6	104,132,119,184,343,32,	0,1478,4065,5198,9018,10645,
#Deleted in new
chr6_GL000254v2_alt	2874354	2883940	chr6_GL000254v2_alt:2874354-2883940	0	-	2874354	2874354	8553170	5	3073,184,93,128,1679,	0,4087,6350,6734,7907,
#Deleted in new
chr6_GL000254v2_alt	2874721	2883470	chr6_GL000254v2_alt:2874721-2883470	0	-	2874721	2882472	789624	7	132,119,184,93,128,213,136,	0,2587,3720,5983,6367,7540,8613,
#Deleted in new
chr6_GL000254v2_alt	2877329	2883957	chr6_GL000254v2_alt:2877329-2883957	0	-	2877329	2882472	789624	6	98,184,93,128,245,69,	0,1112,3375,3759,4932,6559,
#Deleted in new
chr6_GL000254v2_alt	2877336	2883423	chr6_GL000254v2_alt:2877336-2883423	0	-	2877336	2882472	789624	6	91,184,93,128,343,89,	0,1105,3368,3752,4925,5998,
#Deleted in new
chr6_GL000254v2_alt	2877348	2883876	chr6_GL000254v2_alt:2877348-2883876	0	-	2877348	2882472	789624	6	79,184,93,128,343,105,	0,1093,3356,3740,4913,6423,
#Deleted in new
chr6_GL000254v2_alt	2878315	2878391	chr6_GL000254v2_alt:2878315-2878391	3	-	2878315	2878315	789624	1	76,	0,
#Deleted in new
chr6_GL000254v2_alt	2878550	2883928	chr6_GL000254v2_alt:2878550-2883928	0	-	2878550	2882472	789624	5	75,177,128,213,40,	0,2154,2538,3711,5338,
#Deleted in new
chr6_GL000254v2_alt	2878564	2883668	chr6_GL000254v2_alt:2878564-2883668	0	-	2878564	2883639	789624	5	61,93,128,213,96,	0,2140,2524,3697,5008,
#Deleted in new
chr6_GL000254v2_alt	2880760	2883925	chr6_GL000254v2_alt:2880760-2883925	0	-	2880760	2882472	789624	5	37,128,343,175,37,	0,328,1501,2331,3128,
#Deleted in new
chr6_GL000254v2_alt	2880772	2883930	chr6_GL000254v2_alt:2880772-2883930	2	-	2880772	2883134	789624	5	25,128,213,175,42,	0,316,1489,2319,3116,
#Deleted in new
chr6_GL000254v2_alt	2880823	2883942	chr6_GL000254v2_alt:2880823-2883942	0	-	2880823	2882472	789624	4	58,128,343,54,	0,265,1438,3065,
#Deleted in new
chr6_GL000254v2_alt	2881140	2883812	chr6_GL000254v2_alt:2881140-2883812	0	-	2881140	2882472	789624	3	76,343,240,	0,1121,2432,
#Deleted in new
chr6_GL000254v2_alt	2883039	2883117	chr6_GL000254v2_alt:2883039-2883117	3	-	2883039	2883039	789624	1	78,	0,
#Deleted in new
chr6_GL000254v2_alt	2884242	2885066	chr6_GL000254v2_alt:2884242-2885066	3	+	2884242	2884242	789624	2	93,423,	0,401,
#Deleted in new
chr6_GL000254v2_alt	2884311	2885077	chr6_GL000254v2_alt:2884311-2885077	0	+	2884311	2884311	8553170	2	24,430,	0,336,
#Deleted in new
chr6_GL000254v2_alt	2886400	2888572	chr6_GL000254v2_alt:2886400-2888572	3	-	2887346	2888494	789624	3	1078,23,160,	0,1725,2012,
#Deleted in new
chr6_GL000254v2_alt	2886400	2888542	chr6_GL000254v2_alt:2886400-2888542	1	-	2887346	2888494	789624	3	1120,101,130,	0,1647,2012,
#Deleted in new
chr6_GL000254v2_alt	2887222	2888690	chr6_GL000254v2_alt:2887222-2888690	0	-	2887222	2887222	8553170	3	298,161,124,	0,765,1344,
#Deleted in new
chr6_GL000254v2_alt	2887355	2888783	chr6_GL000254v2_alt:2887355-2888783	0	-	2887355	2887355	8553170	3	165,101,217,	0,692,1211,
#Deleted in new
chr6_GL000254v2_alt	2888804	2900754	chr6_GL000254v2_alt:2888804-2900754	0	+	2890108	2900536	789624	4	104,277,222,808,	0,1292,10749,11142,
#Deleted in new
chr6_GL000254v2_alt	2889514	2900754	chr6_GL000254v2_alt:2889514-2900754	3	+	2889628	2900536	789624	4	171,277,222,808,	0,582,10039,10432,
#Deleted in new
chr6_GL000254v2_alt	2889546	2900754	chr6_GL000254v2_alt:2889546-2900754	1	+	2889628	2900536	789624	4	139,277,177,808,	0,550,10007,10400,
#Deleted in new
chr6_GL000254v2_alt	2889573	2899631	chr6_GL000254v2_alt:2889573-2899631	0	+	2889573	2889573	8553170	4	112,277,87,78,	0,523,9050,9980,
#Deleted in new
chr6_GL000254v2_alt	2889594	2899885	chr6_GL000254v2_alt:2889594-2899885	0	+	2889594	2889594	8553170	3	91,277,332,	0,502,9959,
#Deleted in new
chr6_GL000254v2_alt	2913949	2916222	chr6_GL000254v2_alt:2913949-2916222	3	+	2914640	2915591	789624	4	249,108,106,1044,	0,682,876,1229,
#Deleted in new
chr6_GL000254v2_alt	2914165	2916222	chr6_GL000254v2_alt:2914165-2916222	0	+	2914165	2914165	8553170	3	33,300,1044,	0,466,1013,
#Deleted in new
chr6_GL000254v2_alt	2914178	2916222	chr6_GL000254v2_alt:2914178-2916222	1	+	2914640	2915591	789624	4	164,108,106,1044,	0,453,647,1000,
#Deleted in new
chr6_GL000254v2_alt	2914189	2916222	chr6_GL000254v2_alt:2914189-2916222	0	+	2914189	2914189	8553170	3	153,300,1044,	0,442,989,
#Deleted in new
chr6_GL000254v2_alt	2917464	2920234	chr6_GL000254v2_alt:2917464-2920234	3	+	2917639	2919435	0	4	361,46,48,1221,	0,967,1200,1549,
#Deleted in new
chr6_GL000254v2_alt	2922452	2924323	chr6_GL000254v2_alt:2922452-2924323	3	-	2922606	2924315	0	4	609,72,46,170,	0,1004,1259,1701,
#Deleted in new
chr6_GL000254v2_alt	2922452	2924420	chr6_GL000254v2_alt:2922452-2924420	0	-	2922452	2922452	8553170	3	609,72,27,	0,1004,1941,
#Deleted in new
chr6_GL000254v2_alt	2922452	2924325	chr6_GL000254v2_alt:2922452-2924325	0	-	2922452	2922452	8553170	3	609,72,172,	0,1004,1701,
#Deleted in new
chr6_GL000254v2_alt	2928018	2930802	chr6_GL000254v2_alt:2928018-2930802	3	+	2929194	2930569	789624	4	192,119,23,392,	0,1076,1820,2392,
#Deleted in new
chr6_GL000254v2_alt	2928073	2930802	chr6_GL000254v2_alt:2928073-2930802	1	+	2929194	2930569	789624	5	137,119,93,23,392,	0,1021,1462,1765,2337,
#Deleted in new
chr6_GL000254v2_alt	2928088	2930802	chr6_GL000254v2_alt:2928088-2930802	0	+	2928088	2928088	8553170	2	122,1708,	0,1006,
#Deleted in new
chr6_GL000254v2_alt	2928111	2930802	chr6_GL000254v2_alt:2928111-2930802	1	+	2929194	2930478	789624	3	99,119,392,	0,983,2299,
#Deleted in new
chr6_GL000254v2_alt	2928111	2930802	chr6_GL000254v2_alt:2928111-2930802	1	+	2929194	2930478	789624	3	99,119,347,	0,983,2344,
#Deleted in new
chr6_GL000254v2_alt	2928114	2930802	chr6_GL000254v2_alt:2928114-2930802	1	+	2929194	2930569	789624	4	96,119,23,347,	0,980,1724,2341,
#Deleted in new
chr6_GL000254v2_alt	2928129	2930802	chr6_GL000254v2_alt:2928129-2930802	0	+	2928129	2928129	8553170	3	81,123,1357,	0,965,1316,
#Deleted in new
chr6_GL000254v2_alt	2928593	2930802	chr6_GL000254v2_alt:2928593-2930802	1	+	2929194	2930478	789624	4	109,119,93,413,	0,501,942,1796,
#Deleted in new
chr6_GL000254v2_alt	2928742	2930802	chr6_GL000254v2_alt:2928742-2930802	1	+	2929194	2930478	789624	3	92,119,392,	0,352,1668,
#Deleted in new
chr6_GL000254v2_alt	2928789	2929625	chr6_GL000254v2_alt:2928789-2929625	0	+	2929194	2929625	789624	3	45,119,90,	0,305,746,
#Deleted in new
chr6_GL000254v2_alt	2928903	2930802	chr6_GL000254v2_alt:2928903-2930802	1	+	2929194	2930478	789624	3	108,119,392,	0,191,1507,
#Deleted in new
chr6_GL000254v2_alt	2928916	2930802	chr6_GL000254v2_alt:2928916-2930802	1	+	2929194	2930478	789624	2	297,392,	0,1494,
#Deleted in new
chr6_GL000254v2_alt	2928926	2930802	chr6_GL000254v2_alt:2928926-2930802	1	+	2929194	2930569	789624	5	85,119,93,23,392,	0,168,609,912,1484,
#Deleted in new
chr6_GL000254v2_alt	2928960	2930802	chr6_GL000254v2_alt:2928960-2930802	1	+	2929194	2930569	789624	3	253,23,392,	0,878,1450,
#Deleted in new
chr6_GL000254v2_alt	2928974	2930802	chr6_GL000254v2_alt:2928974-2930802	1	+	2929194	2930569	789624	4	37,119,23,392,	0,120,864,1436,
#Deleted in new
chr6_GL000254v2_alt	2928980	2929736	chr6_GL000254v2_alt:2928980-2929736	0	+	2929194	2929736	789624	4	21,119,93,26,	0,114,555,730,
#Deleted in new
chr6_GL000254v2_alt	2928991	2930802	chr6_GL000254v2_alt:2928991-2930802	1	+	2929194	2930478	789624	4	20,119,93,392,	0,103,544,1419,
#Deleted in new
chr6_GL000254v2_alt	2929011	2930802	chr6_GL000254v2_alt:2929011-2930802	1	+	2929194	2930569	789624	4	202,93,23,347,	0,524,827,1444,
#Deleted in new
chr6_GL000254v2_alt	2929094	2930802	chr6_GL000254v2_alt:2929094-2930802	1	+	2929194	2930478	789624	2	119,413,	0,1295,
#Deleted in new
chr6_GL000254v2_alt	2929094	2930802	chr6_GL000254v2_alt:2929094-2930802	1	+	2929194	2930569	789624	4	119,93,23,413,	0,441,744,1295,
#Deleted in new
chr6_GL000254v2_alt	2929094	2930802	chr6_GL000254v2_alt:2929094-2930802	1	+	2929194	2930569	789624	3	119,23,413,	0,744,1295,
#Deleted in new
chr6_GL000254v2_alt	2929149	2930802	chr6_GL000254v2_alt:2929149-2930802	0	+	2929149	2929149	8553170	3	64,151,392,	0,561,1261,
#Deleted in new
chr6_GL000254v2_alt	2929198	2930802	chr6_GL000254v2_alt:2929198-2930802	0	+	2929198	2930478	789624	3	15,93,347,	0,337,1257,
#Deleted in new
chr6_GL000254v2_alt	2930787	2934878	chr6_GL000254v2_alt:2930787-2934878	1	-	2930959	2934614	0	4	282,108,345,307,	0,631,887,3784,
#Deleted in new
chr6_GL000254v2_alt	2930787	2934878	chr6_GL000254v2_alt:2930787-2934878	3	-	2931086	2934614	0	4	337,108,345,307,	0,631,887,3784,
#Deleted in new
chr6_GL000254v2_alt	2930787	2934852	chr6_GL000254v2_alt:2930787-2934852	0	-	2930787	2930787	8553170	4	337,108,345,103,	0,631,887,3962,
#Deleted in new
chr6_GL000254v2_alt	2930787	2934705	chr6_GL000254v2_alt:2930787-2934705	0	-	2930787	2930787	8553170	4	337,108,118,22,	0,631,887,3896,
#Deleted in new
chr6_GL000254v2_alt	2931166	2934878	chr6_GL000254v2_alt:2931166-2934878	1	-	2931204	2934614	0	4	115,108,345,307,	0,252,508,3405,
#Deleted in new
chr6_GL000254v2_alt	2931189	2934642	chr6_GL000254v2_alt:2931189-2934642	1	-	2931204	2934614	0	5	92,108,118,152,71,	0,229,485,678,3382,
#Deleted in new
chr6_GL000254v2_alt	2931189	2934642	chr6_GL000254v2_alt:2931189-2934642	0	-	2931511	2934614	789624	4	92,108,290,71,	0,229,540,3382,
#Deleted in new
chr6_GL000254v2_alt	2957069	2958907	chr6_GL000254v2_alt:2957069-2958907	3	+	2957215	2958786	0	6	171,62,67,42,163,206,	0,337,486,920,1160,1632,
#Deleted in new
chr6_GL000254v2_alt	2957102	2958226	chr6_GL000254v2_alt:2957102-2958226	0	+	2957102	2957102	8553170	3	77,62,671,	0,304,453,
#Deleted in new
chr6_GL000254v2_alt	2957112	2958907	chr6_GL000254v2_alt:2957112-2958907	0	+	2957112	2958786	789624	6	67,62,67,42,163,206,	0,294,443,877,1117,1589,
#Deleted in new
chr6_GL000254v2_alt	2957165	2958907	chr6_GL000254v2_alt:2957165-2958907	0	+	2957165	2957165	8553170	4	75,62,837,206,	0,241,390,1536,
#Deleted in new
chr6_GL000254v2_alt	2957511	2958907	chr6_GL000254v2_alt:2957511-2958907	0	+	2957511	2957511	8553170	3	111,163,206,	0,718,1190,
#Deleted in new
chr6_GL000254v2_alt	2957876	2958907	chr6_GL000254v2_alt:2957876-2958907	1	+	2957997	2958786	0	3	155,163,206,	0,353,825,
#Deleted in new
chr6_GL000254v2_alt	2962601	2979651	chr6_GL000254v2_alt:2962601-2979651	3	+	2964674	2979466	789624	31	139,175,178,100,73,144,152,80,143,91,217,475,191,298,211,1854,269,131,130,86,225,141,72,168,83,211,99,213,95,91,326,	0,2010,3010,3539,3728,4449,4738,5070,5298,6050,6260,7043,8422,8826,9869,10417,12657,13137,13514,13750,14031,14410,14672,14860,15245,15487,15788,16011,16320,16512,16724,
#Deleted in new
chr6_GL000254v2_alt	2962605	2968742	chr6_GL000254v2_alt:2962605-2968742	0	+	2962605	2962605	8553170	8	135,100,73,144,152,80,143,91,	0,3535,3724,4445,4734,5066,5294,6046,
#Deleted in new
chr6_GL000254v2_alt	2962606	2979651	chr6_GL000254v2_alt:2962606-2979651	1	+	2964674	2979466	789624	31	134,212,178,100,73,144,152,80,143,91,217,475,191,298,211,1854,269,131,130,86,225,141,72,168,83,211,99,213,95,91,326,	0,1968,3005,3534,3723,4444,4733,5065,5293,6045,6255,7038,8417,8821,9864,10412,12652,13132,13509,13745,14026,14405,14667,14855,15240,15482,15783,16006,16315,16507,16719,
#Deleted in new
chr6_GL000254v2_alt	2964963	2965095	chr6_GL000254v2_alt:2964963-2965095	3	+	2964963	2964963	789624	1	132,	0,
#Deleted in new
chr6_GL000254v2_alt	2966781	2967377	chr6_GL000254v2_alt:2966781-2967377	0	+	2966781	2966781	8553170	2	413,38,	0,558,
#Deleted in new
chr6_GL000254v2_alt	2967633	2968954	chr6_GL000254v2_alt:2967633-2968954	0	+	2967633	2967633	8553170	3	409,91,93,	0,1018,1228,
#Deleted in new
chr6_GL000254v2_alt	2970519	2971648	chr6_GL000254v2_alt:2970519-2971648	0	+	2970519	2970519	8553170	2	695,221,	0,908,
#Deleted in new
chr6_GL000254v2_alt	2975833	2976636	chr6_GL000254v2_alt:2975833-2976636	0	+	2975833	2975833	8553170	2	412,285,	0,518,
#Deleted in new
chr6_GL000254v2_alt	2976286	2977196	chr6_GL000254v2_alt:2976286-2977196	0	+	2976286	2976286	8553170	2	571,185,	0,725,
#Deleted in new
chr6_GL000254v2_alt	2977121	2977589	chr6_GL000254v2_alt:2977121-2977589	0	+	2977121	2977121	8553170	2	31,316,	0,152,
#Deleted in new
chr6_GL000254v2_alt	2977239	2978130	chr6_GL000254v2_alt:2977239-2978130	0	+	2977239	2977239	8553170	2	690,42,	0,849,
#Deleted in new
chr6_GL000254v2_alt	2977255	2978691	chr6_GL000254v2_alt:2977255-2978691	0	+	2977255	2977255	8553170	4	90,468,211,302,	0,206,833,1134,
#Deleted in new
chr6_GL000254v2_alt	2978126	2979651	chr6_GL000254v2_alt:2978126-2979651	0	+	2978126	2978126	8553170	5	173,99,213,95,538,	0,263,486,795,987,
#Deleted in new
chr6_GL000254v2_alt	2978415	2979651	chr6_GL000254v2_alt:2978415-2979651	0	+	2978415	2978415	8553170	3	73,404,538,	0,197,698,
#Deleted in new
chr6_GL000254v2_alt	2978714	2979651	chr6_GL000254v2_alt:2978714-2979651	0	+	2978714	2978714	8553170	3	302,91,326,	0,399,611,
#Deleted in new
chr6_GL000254v2_alt	2980906	2994577	chr6_GL000254v2_alt:2980906-2994577	1	-	2981009	2993629	789624	25	199,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,282,	0,472,1171,1357,1617,1764,2076,2292,2511,2748,3084,3797,4848,5040,5483,5904,6365,7352,8550,9636,9870,10158,10469,12615,13389,
#Deleted in new
chr6_GL000254v2_alt	2980906	2994250	chr6_GL000254v2_alt:2980906-2994250	3	-	2981009	2993629	789624	25	199,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,138,	0,472,1171,1357,1617,1764,2076,2292,2511,2748,3084,3797,4848,5040,5483,5904,6365,7352,8550,9636,9870,10158,10469,12615,13206,
#Deleted in new
chr6_GL000254v2_alt	2980906	2982816	chr6_GL000254v2_alt:2980906-2982816	0	-	2981009	2982816	789624	4	199,108,60,146,	0,1171,1617,1764,
#Deleted in new
chr6_GL000254v2_alt	2980906	2994507	chr6_GL000254v2_alt:2980906-2994507	1	-	2981009	2993629	789624	25	199,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,254,75,54,197,118,121,236,	0,472,1171,1357,1617,1764,2076,2292,2511,2748,3084,3797,4848,5040,5483,5904,6365,7352,8550,9636,9870,10158,10469,12615,13365,
#Deleted in new
chr6_GL000254v2_alt	2980906	2983107	chr6_GL000254v2_alt:2980906-2983107	0	-	2981009	2983107	789624	6	199,108,144,60,147,125,	0,1171,1357,1617,1764,2076,
#Deleted in new
chr6_GL000254v2_alt	2980906	2982418	chr6_GL000254v2_alt:2980906-2982418	0	-	2980906	2980906	8553170	4	199,147,108,155,	0,472,1171,1357,
#Deleted in new
chr6_GL000254v2_alt	2980906	2981667	chr6_GL000254v2_alt:2980906-2981667	0	-	2980906	2980906	8553170	2	199,289,	0,472,
#Deleted in new
chr6_GL000254v2_alt	2980907	2994572	chr6_GL000254v2_alt:2980907-2994572	1	-	2981009	2993629	789624	24	198,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,277,	0,1170,1356,1616,1763,2075,2291,2510,2747,3083,3796,4847,5039,5482,5903,6364,7351,8549,9635,9869,10157,10468,12614,13388,
#Deleted in new
chr6_GL000254v2_alt	2980907	2994572	chr6_GL000254v2_alt:2980907-2994572	1	-	2981009	2993629	0	23	198,108,60,147,125,103,54,170,189,15,85,113,78,253,198,130,236,75,54,197,118,121,277,	0,1170,1616,1763,2075,2291,2510,2747,3083,4068,4847,5039,5482,5903,6364,7351,8549,9635,9869,10157,10468,12614,13388,
#Deleted in new
chr6_GL000254v2_alt	2982703	2984024	chr6_GL000254v2_alt:2982703-2984024	0	-	2982703	2982703	8553170	3	768,170,34,	0,951,1287,
#Deleted in new
chr6_GL000254v2_alt	2983726	2986181	chr6_GL000254v2_alt:2983726-2986181	0	-	2983726	2983726	8553170	5	98,292,287,88,235,	0,264,977,2028,2220,
#Deleted in new
chr6_GL000254v2_alt	2984097	2994550	chr6_GL000254v2_alt:2984097-2994550	0	-	2984097	2993629	789624	16	185,287,88,113,108,78,253,198,130,236,75,54,197,118,121,166,	0,606,1657,1849,2074,2292,2713,3174,4161,5359,6445,6679,6967,7278,9424,10287,
#Deleted in new
chr6_GL000254v2_alt	2984558	2986065	chr6_GL000254v2_alt:2984558-2986065	0	-	2984558	2984558	8553170	3	432,88,119,	0,1196,1388,
#Deleted in new
chr6_GL000254v2_alt	2984706	2986934	chr6_GL000254v2_alt:2984706-2986934	0	-	2984706	2986934	789624	5	284,88,113,105,124,	0,1048,1240,1683,2104,
#Deleted in new
chr6_GL000254v2_alt	2984744	2987355	chr6_GL000254v2_alt:2984744-2987355	0	-	2984744	2987355	789624	7	246,88,113,78,96,31,84,	0,1010,1202,1645,2066,2288,2527,
#Deleted in new
chr6_GL000254v2_alt	2984833	2987426	chr6_GL000254v2_alt:2984833-2987426	0	-	2984833	2984833	8553170	4	157,88,253,155,	0,921,1977,2438,
#Deleted in new
chr6_GL000254v2_alt	2984987	2987368	chr6_GL000254v2_alt:2984987-2987368	0	-	2984987	2987368	789624	5	3,88,113,253,97,	0,767,959,1823,2284,
#Deleted in new
chr6_GL000254v2_alt	2986181	2994230	chr6_GL000254v2_alt:2986181-2994230	0	-	2986181	2993629	789624	12	98,78,253,198,130,236,75,54,197,118,121,130,	0,208,629,1090,2077,3275,4361,4595,4883,5194,7340,7919,
#Deleted in new
chr6_GL000254v2_alt	2986358	2987050	chr6_GL000254v2_alt:2986358-2987050	0	-	2986358	2986358	8553170	2	109,240,	0,452,
#Deleted in new
chr6_GL000254v2_alt	2989456	2993786	chr6_GL000254v2_alt:2989456-2993786	0	-	2989456	2993629	789624	6	236,75,197,118,121,19,	0,1086,1608,1919,4065,4311,
#Deleted in new
chr6_GL000254v2_alt	2989456	2994024	chr6_GL000254v2_alt:2989456-2994024	0	-	2989456	2993629	789624	7	236,75,54,197,118,121,79,	0,1086,1320,1608,1919,4065,4489,
#Deleted in new
chr6_GL000254v2_alt	2989456	2994224	chr6_GL000254v2_alt:2989456-2994224	0	-	2989456	2993629	789624	6	236,75,197,118,121,112,	0,1086,1608,1919,4065,4656,
#Deleted in new
chr6_GL000254v2_alt	2989458	2994019	chr6_GL000254v2_alt:2989458-2994019	0	-	2989458	2993629	789624	7	234,75,54,197,118,121,252,	0,1084,1318,1606,1917,4063,4309,
#Deleted in new
chr6_GL000254v2_alt	2989459	2994520	chr6_GL000254v2_alt:2989459-2994520	0	-	2989459	2993629	789624	6	233,75,197,118,121,249,	0,1083,1605,1916,4062,4812,
#Deleted in new
chr6_GL000254v2_alt	2989465	2993841	chr6_GL000254v2_alt:2989465-2993841	0	-	2989465	2993629	789624	7	227,75,54,197,118,121,110,	0,1077,1311,1599,1910,4056,4266,
#Deleted in new
chr6_GL000254v2_alt	2989469	2994539	chr6_GL000254v2_alt:2989469-2994539	0	-	2989469	2993629	789624	7	223,75,54,197,118,121,268,	0,1073,1307,1595,1906,4052,4802,
#Deleted in new
chr6_GL000254v2_alt	2989545	2994189	chr6_GL000254v2_alt:2989545-2994189	0	-	2989545	2993629	789624	6	147,75,197,118,121,89,	0,997,1519,1830,3976,4555,
#Deleted in new
chr6_GL000254v2_alt	2989564	2994517	chr6_GL000254v2_alt:2989564-2994517	0	-	2989564	2993629	789624	7	146,75,54,197,118,121,133,	0,978,1212,1500,1811,3957,4820,
#Deleted in new
chr6_GL000254v2_alt	2989571	2994317	chr6_GL000254v2_alt:2989571-2994317	0	-	2989571	2993629	789624	6	121,75,197,118,121,22,	0,971,1493,1804,3950,4724,
#Deleted in new
chr6_GL000254v2_alt	2989653	2993845	chr6_GL000254v2_alt:2989653-2993845	0	-	2989653	2993629	789624	6	39,75,54,197,118,324,	0,889,1123,1411,1722,3868,
#Deleted in new
chr6_GL000254v2_alt	2990593	2994188	chr6_GL000254v2_alt:2990593-2994188	0	-	2990593	2990593	8553170	6	24,54,219,118,121,76,	0,183,471,782,2928,3519,
#Deleted in new
chr6_GL000254v2_alt	2990777	2993981	chr6_GL000254v2_alt:2990777-2993981	0	-	2990777	2993629	789624	5	53,197,118,121,55,	0,287,598,2744,3149,
#Deleted in new
chr6_GL000254v2_alt	2991095	2994510	chr6_GL000254v2_alt:2991095-2994510	0	-	2991095	2991095	8553170	4	188,118,121,215,	0,280,2426,3200,
#Deleted in new
chr6_GL000254v2_alt	2994287	2999954	chr6_GL000254v2_alt:2994287-2999954	1	+	2998445	2999660	789624	5	136,155,74,99,458,	0,4056,4809,4964,5209,
#Deleted in new
chr6_GL000254v2_alt	2994288	3000082	chr6_GL000254v2_alt:2994288-3000082	3	+	2998445	2999961	0	6	135,155,74,99,99,147,	0,4055,4808,4963,5208,5647,
#Deleted in new
chr6_GL000254v2_alt	2997765	3000082	chr6_GL000254v2_alt:2997765-3000082	1	+	2997838	2999961	0	6	187,155,74,99,99,147,	0,578,1331,1486,1731,2170,
#Deleted in new
chr6_GL000254v2_alt	3000169	3002644	chr6_GL000254v2_alt:3000169-3002644	3	-	3000934	3001819	789624	1	2475,	0,
#Deleted in new
chr6_GL000254v2_alt	3000200	3002593	chr6_GL000254v2_alt:3000200-3002593	3	+	3000200	3000200	8553170	2	351,322,	0,2071,
#Deleted in new
chr6_GL000254v2_alt	3003100	3008155	chr6_GL000254v2_alt:3003100-3008155	1	-	3004137	3006350	789624	4	1482,725,163,423,	0,2624,3612,4632,
#Deleted in new
chr6_GL000254v2_alt	3003947	3007733	chr6_GL000254v2_alt:3003947-3007733	1	-	3004137	3006350	789624	4	635,728,163,288,	0,1777,2765,3498,
#Deleted in new
chr6_GL000254v2_alt	3003947	3007722	chr6_GL000254v2_alt:3003947-3007722	1	-	3004137	3006350	789624	4	635,725,163,277,	0,1777,2765,3498,
#Deleted in new
chr6_GL000254v2_alt	3003947	3007262	chr6_GL000254v2_alt:3003947-3007262	1	-	3004137	3006350	789624	3	635,725,550,	0,1777,2765,
#Deleted in new
chr6_GL000254v2_alt	3003947	3007502	chr6_GL000254v2_alt:3003947-3007502	1	-	3004137	3006350	789624	4	635,728,163,72,	0,1777,2765,3483,
#Deleted in new
chr6_GL000254v2_alt	3005159	3005273	chr6_GL000254v2_alt:3005159-3005273	3	+	3005159	3005159	8553170	1	114,	0,
#Deleted in new
chr6_GL000254v2_alt	3005754	3007669	chr6_GL000254v2_alt:3005754-3007669	0	-	3005754	3006350	789624	3	695,67,224,	0,958,1691,
#Deleted in new
chr6_GL000254v2_alt	3005856	3007314	chr6_GL000254v2_alt:3005856-3007314	0	-	3005856	3006350	789624	3	596,163,43,	0,856,1415,
#Deleted in new
chr6_GL000254v2_alt	3005894	3007062	chr6_GL000254v2_alt:3005894-3007062	0	-	3005894	3006350	789624	3	558,163,101,	0,818,1067,
#Deleted in new
chr6_GL000254v2_alt	3006029	3007706	chr6_GL000254v2_alt:3006029-3007706	0	-	3006029	3006350	789624	3	423,67,261,	0,683,1416,
#Deleted in new
chr6_GL000254v2_alt	3006081	3007057	chr6_GL000254v2_alt:3006081-3007057	2	-	3006081	3006350	789624	3	368,163,96,	0,631,880,
#Deleted in new
chr6_GL000254v2_alt	3007107	3011942	chr6_GL000254v2_alt:3007107-3011942	1	+	3007319	3011798	789624	7	258,83,103,116,76,190,235,	0,1585,2632,3303,3861,4083,4600,
#Deleted in new
chr6_GL000254v2_alt	3007751	3014154	chr6_GL000254v2_alt:3007751-3014154	1	+	3008703	3014154	789624	7	329,83,103,116,76,129,419,	0,941,1988,2659,3217,5276,5984,
#Deleted in new
chr6_GL000254v2_alt	3007751	3014154	chr6_GL000254v2_alt:3007751-3014154	1	+	3008703	3014154	789624	5	329,83,103,77,234,	0,941,1988,2659,6169,
#Deleted in new
chr6_GL000254v2_alt	3007935	3011942	chr6_GL000254v2_alt:3007935-3011942	1	+	3008703	3011798	0	7	145,83,103,116,76,190,235,	0,757,1804,2475,3033,3255,3772,
#Deleted in new
chr6_GL000254v2_alt	3007952	3012215	chr6_GL000254v2_alt:3007952-3012215	0	+	3007952	3007952	8553170	5	128,83,103,970,508,	0,740,1787,2458,3755,
#Deleted in new
chr6_GL000254v2_alt	3007958	3010113	chr6_GL000254v2_alt:3007958-3010113	0	+	3007958	3007958	8553170	3	122,83,374,	0,734,1781,
#Deleted in new
chr6_GL000254v2_alt	3007965	3011336	chr6_GL000254v2_alt:3007965-3011336	0	+	3007965	3007965	8553170	5	115,83,103,116,368,	0,727,1774,2445,3003,
#Deleted in new
chr6_GL000254v2_alt	3007969	3011942	chr6_GL000254v2_alt:3007969-3011942	0	+	3007969	3007969	8553170	7	111,83,121,116,76,190,235,	0,723,1752,2441,2999,3221,3738,
#Deleted in new
chr6_GL000254v2_alt	3007973	3015418	chr6_GL000254v2_alt:3007973-3015418	3	+	3008703	3013736	789624	8	107,83,103,116,76,190,129,1683,	0,719,1766,2437,2995,3217,5054,5762,
#Deleted in new
chr6_GL000254v2_alt	3008163	3011942	chr6_GL000254v2_alt:3008163-3011942	1	+	3008703	3011798	0	7	105,83,103,116,76,190,235,	0,529,1576,2247,2805,3027,3544,
#Deleted in new
chr6_GL000254v2_alt	3008226	3011942	chr6_GL000254v2_alt:3008226-3011942	1	+	3008703	3011798	0	7	133,83,103,116,76,190,235,	0,466,1513,2184,2742,2964,3481,
#Deleted in new
chr6_GL000254v2_alt	3008691	3014218	chr6_GL000254v2_alt:3008691-3014218	1	+	3008703	3013736	789624	7	84,103,116,76,190,129,483,	0,1048,1719,2277,2499,4336,5044,
#Deleted in new
chr6_GL000254v2_alt	3010989	3015418	chr6_GL000254v2_alt:3010989-3015418	3	+	3010989	3014154	789624	4	55,36,129,1683,	0,1855,2038,2746,
#Deleted in new
chr6_GL000254v2_alt	3012250	3015418	chr6_GL000254v2_alt:3012250-3015418	0	+	3012250	3012250	8553170	2	906,1683,	0,1485,
#Deleted in new
chr6_GL000254v2_alt	3012822	3015418	chr6_GL000254v2_alt:3012822-3015418	0	+	3012822	3014154	789624	3	58,129,1683,	0,205,913,
#Deleted in new
chr6_GL000254v2_alt	3018555	3025912	chr6_GL000254v2_alt:3018555-3025912	0	-	3018828	3025912	789624	4	437,168,292,53,	0,2417,6366,7304,
#Deleted in new
chr6_GL000254v2_alt	3018555	3022249	chr6_GL000254v2_alt:3018555-3022249	3	-	3018828	3022245	789624	3	437,168,125,	0,2417,3569,
#Deleted in new
chr6_GL000254v2_alt	3018555	3025912	chr6_GL000254v2_alt:3018555-3025912	0	-	3018555	3018555	8553170	4	437,168,172,53,	0,2417,4546,7304,
#Deleted in new
chr6_GL000254v2_alt	3018555	3025082	chr6_GL000254v2_alt:3018555-3025082	0	-	3018555	3018555	8553170	6	437,207,168,159,212,161,	0,1738,2417,4546,4962,6366,
#Deleted in new
chr6_GL000254v2_alt	3018555	3022236	chr6_GL000254v2_alt:3018555-3022236	0	-	3018555	3018555	8553170	3	437,168,206,	0,2417,3475,
#Deleted in new
chr6_GL000254v2_alt	3018555	3023348	chr6_GL000254v2_alt:3018555-3023348	0	-	3018555	3018555	8553170	3	437,168,247,	0,2417,4546,
#Deleted in new
chr6_GL000254v2_alt	3018555	3022236	chr6_GL000254v2_alt:3018555-3022236	0	-	3018555	3018555	8553170	2	437,1264,	0,2417,
#Deleted in new
chr6_GL000254v2_alt	3023219	3023832	chr6_GL000254v2_alt:3023219-3023832	0	-	3023219	3023219	8553170	2	54,315,	0,298,
#Deleted in new
chr6_GL000254v2_alt	3028820	3044946	chr6_GL000254v2_alt:3028820-3044946	1	-	3029083	3044641	789624	18	347,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,462,	0,549,693,875,1092,1300,1774,2066,2632,3129,3590,4630,4855,6078,6410,9998,13994,15664,
#Deleted in new
chr6_GL000254v2_alt	3028826	3045289	chr6_GL000254v2_alt:3028826-3045289	3	-	3029083	3045283	789624	20	341,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,67,57,267,	0,543,687,869,1086,1294,1768,2060,2626,3123,3584,4624,4849,6072,6404,9992,13988,14320,15120,16196,
#Deleted in new
chr6_GL000254v2_alt	3028826	3030261	chr6_GL000254v2_alt:3028826-3030261	0	-	3028826	3028826	8553170	5	341,47,99,77,349,	0,543,687,869,1086,
#Deleted in new
chr6_GL000254v2_alt	3028826	3045213	chr6_GL000254v2_alt:3028826-3045213	0	-	3028826	3028826	789624	19	341,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,57,191,	0,543,687,869,1086,1294,1768,2060,2626,3123,3584,4624,4849,6072,6404,9992,13988,15120,16196,
#Deleted in new
chr6_GL000254v2_alt	3028826	3044946	chr6_GL000254v2_alt:3028826-3044946	0	-	3028826	3028826	789624	20	341,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,67,57,462,	0,543,687,869,1086,1294,1768,2060,2626,3123,3584,4624,4849,6072,6404,9992,13988,14320,15120,15658,
#Deleted in new
chr6_GL000254v2_alt	3028826	3032474	chr6_GL000254v2_alt:3028826-3032474	0	-	3028826	3028826	8553170	10	341,47,99,77,63,57,397,124,50,64,	0,543,687,869,1086,1294,1768,2626,3123,3584,
#Deleted in new
chr6_GL000254v2_alt	3029258	3030193	chr6_GL000254v2_alt:3029258-3030193	0	-	3029258	3029258	8553170	4	158,99,77,281,	0,255,437,654,
#Deleted in new
chr6_GL000254v2_alt	3029446	3030175	chr6_GL000254v2_alt:3029446-3030175	0	-	3029446	3029446	8553170	3	166,77,263,	0,249,466,
#Deleted in new
chr6_GL000254v2_alt	3029524	3032117	chr6_GL000254v2_alt:3029524-3032117	0	-	3029524	3029524	8553170	8	88,77,63,57,64,105,124,168,	0,171,388,596,1070,1362,1928,2425,
#Deleted in new
chr6_GL000254v2_alt	3029644	3033518	chr6_GL000254v2_alt:3029644-3033518	0	-	3029644	3029644	8553170	8	128,265,64,105,124,50,64,68,	0,268,950,1242,1808,2305,2766,3806,
#Deleted in new
chr6_GL000254v2_alt	3030886	3045206	chr6_GL000254v2_alt:3030886-3045206	0	-	3030886	3030886	8553170	11	105,124,50,64,102,115,123,74,86,87,184,	0,566,1063,1524,2564,2789,4012,4344,7932,11928,14136,
#Deleted in new
chr6_GL000254v2_alt	3032427	3044739	chr6_GL000254v2_alt:3032427-3044739	0	-	3032427	3044641	789624	8	47,102,115,123,74,86,87,255,	0,1023,1248,2471,2803,6391,10387,12057,
#Deleted in new
chr6_GL000254v2_alt	3033317	3034928	chr6_GL000254v2_alt:3033317-3034928	0	-	3033317	3033317	8553170	3	235,115,30,	0,358,1581,
#Deleted in new
chr6_GL000254v2_alt	3033460	3034166	chr6_GL000254v2_alt:3033460-3034166	0	-	3033460	3033460	8553170	2	92,491,	0,215,
#Deleted in new
chr6_GL000254v2_alt	3048757	3052468	chr6_GL000254v2_alt:3048757-3052468	3	+	3048779	3052464	789624	6	74,330,264,156,67,29,	0,573,986,3141,3467,3682,
#Deleted in new
chr6_GL000254v2_alt	3048776	3059793	chr6_GL000254v2_alt:3048776-3059793	1	+	3048779	3059679	789624	6	55,330,264,156,123,338,	0,554,967,3122,8602,10679,
#Deleted in new
chr6_GL000254v2_alt	3054212	3055689	chr6_GL000254v2_alt:3054212-3055689	0	-	3054212	3054212	8553170	3	206,126,52,	0,328,1425,
#Deleted in new
chr6_GL000254v2_alt	3054212	3055689	chr6_GL000254v2_alt:3054212-3055689	3	-	3054217	3055689	789624	3	205,126,52,	0,328,1425,
#Deleted in new
chr6_GL000254v2_alt	3054217	3055689	chr6_GL000254v2_alt:3054217-3055689	1	-	3054415	3055689	789624	3	221,126,52,	0,323,1420,
#Deleted in new
chr6_GL000254v2_alt	3054217	3055689	chr6_GL000254v2_alt:3054217-3055689	1	-	3054415	3055689	789624	2	449,52,	0,1420,
#Deleted in new
chr6_GL000254v2_alt	3057232	3059679	chr6_GL000254v2_alt:3057232-3059679	0	+	3057232	3059679	789624	3	55,123,345,	0,146,2102,
#Deleted in new
chr6_GL000254v2_alt	3057232	3059679	chr6_GL000254v2_alt:3057232-3059679	1	+	3057232	3059679	789624	3	55,123,224,	0,146,2223,
#Deleted in new
chr6_GL000254v2_alt	3057232	3059679	chr6_GL000254v2_alt:3057232-3059679	2	+	3057232	3057232	8553170	2	269,224,	0,2223,
#Deleted in new
chr6_GL000254v2_alt	3060468	3068585	chr6_GL000254v2_alt:3060468-3068585	0	+	3060468	3060468	8553170	7	90,135,43,348,91,258,1741,	0,4410,4808,5045,5548,5993,6376,
#Deleted in new
chr6_GL000254v2_alt	3060522	3063720	chr6_GL000254v2_alt:3060522-3063720	3	-	3060970	3063554	789624	3	663,111,218,	0,1445,2980,
#Deleted in new
chr6_GL000254v2_alt	3060522	3063554	chr6_GL000254v2_alt:3060522-3063554	1	-	3060970	3061180	789624	4	663,111,111,52,	0,1445,2305,2980,
#Deleted in new
chr6_GL000254v2_alt	3065247	3068585	chr6_GL000254v2_alt:3065247-3068585	3	+	3065258	3066918	789624	6	72,348,91,41,99,1741,	0,266,769,1214,1373,1597,
#Deleted in new
chr6_GL000254v2_alt	3065258	3068585	chr6_GL000254v2_alt:3065258-3068585	1	+	3065258	3066949	789624	4	61,348,80,1741,	0,255,1381,1586,
#Deleted in new
chr6_GL000254v2_alt	3065258	3068585	chr6_GL000254v2_alt:3065258-3068585	1	+	3065258	3066918	789624	4	61,348,99,1741,	0,255,1362,1586,
#Deleted in new
chr6_GL000254v2_alt	3065258	3068585	chr6_GL000254v2_alt:3065258-3068585	1	+	3065258	3066949	789624	6	61,348,91,41,80,1741,	0,255,758,1203,1381,1586,
#Deleted in new
chr6_GL000254v2_alt	3065258	3068585	chr6_GL000254v2_alt:3065258-3068585	1	+	3065258	3066949	789624	5	61,348,41,99,1741,	0,255,1203,1362,1586,
#Deleted in new
chr6_GL000254v2_alt	3065258	3068585	chr6_GL000254v2_alt:3065258-3068585	0	+	3065258	3065258	8553170	5	61,348,91,41,1965,	0,255,758,1203,1362,
#Deleted in new
chr6_GL000254v2_alt	3065258	3068585	chr6_GL000254v2_alt:3065258-3068585	0	+	3065258	3065258	8553170	5	61,348,91,258,1741,	0,255,758,1203,1586,
#Deleted in new
chr6_GL000254v2_alt	3068912	3070752	chr6_GL000254v2_alt:3068912-3070752	0	-	3069071	3070752	789624	6	316,101,120,74,100,13,	0,505,1135,1413,1608,1827,
#Deleted in new
chr6_GL000254v2_alt	3068912	3071667	chr6_GL000254v2_alt:3068912-3071667	1	-	3069111	3071036	789624	6	316,150,120,74,100,928,	0,505,1135,1413,1608,1827,
#Deleted in new
chr6_GL000254v2_alt	3068912	3072138	chr6_GL000254v2_alt:3068912-3072138	1	-	3069111	3071036	789624	7	316,150,120,74,100,357,213,	0,505,1135,1413,1608,1827,3013,
#Deleted in new
chr6_GL000254v2_alt	3068912	3072492	chr6_GL000254v2_alt:3068912-3072492	1	-	3069111	3071036	789624	7	316,150,120,74,100,361,567,	0,505,1135,1413,1608,1827,3013,
#Deleted in new
chr6_GL000254v2_alt	3068912	3072137	chr6_GL000254v2_alt:3068912-3072137	0	-	3068912	3068912	8553170	5	316,150,120,100,212,	0,505,1135,1608,3013,
#Deleted in new
chr6_GL000254v2_alt	3068912	3071382	chr6_GL000254v2_alt:3068912-3071382	2	-	3068912	3068912	8553170	4	316,150,573,643,	0,505,1135,1827,
#Deleted in new
chr6_GL000254v2_alt	3068912	3072102	chr6_GL000254v2_alt:3068912-3072102	0	-	3068912	3068912	8553170	6	316,150,120,74,100,177,	0,505,1135,1413,1608,3013,
#Deleted in new
chr6_GL000254v2_alt	3069449	3071671	chr6_GL000254v2_alt:3069449-3071671	0	-	3069449	3071036	789624	6	118,120,74,100,361,114,	0,598,876,1071,1290,2108,
#Deleted in new
chr6_GL000254v2_alt	3069480	3071376	chr6_GL000254v2_alt:3069480-3071376	0	-	3069480	3071036	789624	6	87,120,74,100,361,140,	0,567,845,1040,1259,1756,
#Deleted in new
chr6_GL000254v2_alt	3070055	3072120	chr6_GL000254v2_alt:3070055-3072120	0	-	3070055	3070055	8553170	3	565,361,195,	0,684,1870,
#Deleted in new
chr6_GL000254v2_alt	3072455	3078446	chr6_GL000254v2_alt:3072455-3078446	1	-	3072716	3078179	0	6	423,182,107,126,110,306,	0,1636,2985,3255,3573,5685,
#Deleted in new
chr6_GL000254v2_alt	3072455	3078451	chr6_GL000254v2_alt:3072455-3078451	1	-	3072716	3078179	0	7	423,182,107,126,110,151,28,	0,1636,2985,3255,3573,5685,5968,
#Deleted in new
chr6_GL000254v2_alt	3072455	3081639	chr6_GL000254v2_alt:3072455-3081639	3	-	3072716	3078179	0	8	423,182,107,126,110,89,125,35,	0,1636,2985,3255,3573,5685,8684,9149,
#Deleted in new
chr6_GL000254v2_alt	3072455	3079197	chr6_GL000254v2_alt:3072455-3079197	1	-	3072716	3078179	0	7	423,182,107,126,110,89,523,	0,1636,2985,3255,3573,5685,6219,
#Deleted in new
chr6_GL000254v2_alt	3072457	3078424	chr6_GL000254v2_alt:3072457-3078424	1	-	3072716	3078179	0	7	421,182,107,126,110,89,63,	0,1634,2983,3253,3571,5683,5904,
#Deleted in new
chr6_GL000254v2_alt	3081866	3086106	chr6_GL000254v2_alt:3081866-3086106	0	+	3082342	3086106	789624	8	72,27,160,124,81,63,122,45,	0,203,463,1172,2882,3113,3909,4195,
#Deleted in new
chr6_GL000254v2_alt	3081872	3104565	chr6_GL000254v2_alt:3081872-3104565	3	+	3082342	3104420	789624	25	66,160,124,81,63,122,110,36,83,46,139,63,129,73,110,81,88,190,127,150,75,144,138,74,257,	0,457,1166,2876,3107,3903,4189,4545,5236,7398,13309,13575,18181,18564,18782,19113,19441,19802,20106,20706,21204,21488,21834,22128,22436,
#Deleted in new
chr6_GL000254v2_alt	3081875	3104565	chr6_GL000254v2_alt:3081875-3104565	1	+	3082342	3104420	789624	25	221,160,124,81,63,122,110,36,83,46,139,63,129,73,110,81,88,190,127,150,75,144,138,74,257,	0,454,1163,2873,3104,3900,4186,4542,5233,7395,13306,13572,18178,18561,18779,19110,19438,19799,20103,20703,21201,21485,21831,22125,22433,
#Deleted in new
chr6_GL000254v2_alt	3081892	3085352	chr6_GL000254v2_alt:3081892-3085352	0	+	3081892	3081892	8553170	5	46,160,124,81,373,	0,437,1146,2856,3087,
#Deleted in new
chr6_GL000254v2_alt	3081895	3106740	chr6_GL000254v2_alt:3081895-3106740	3	+	3082342	3104420	789624	29	43,160,124,81,63,122,161,36,83,46,139,63,129,73,110,81,88,190,127,150,75,144,138,74,749,141,96,90,416,	0,434,1143,2853,3084,3880,4115,4522,5213,7375,13286,13552,18158,18541,18759,19090,19418,19779,20083,20683,21181,21465,21811,22105,22413,23408,24057,24259,24429,
#Deleted in new
chr6_GL000254v2_alt	3081896	3104569	chr6_GL000254v2_alt:3081896-3104569	1	+	3082342	3104420	789624	25	42,160,124,81,63,122,110,36,83,46,139,63,129,73,110,81,88,190,127,150,78,144,138,74,261,	0,433,1142,2852,3083,3879,4165,4521,5212,7374,13285,13551,18157,18540,18758,19089,19417,19778,20082,20682,21177,21464,21810,22104,22412,
#Deleted in new
chr6_GL000254v2_alt	3081896	3104565	chr6_GL000254v2_alt:3081896-3104565	1	+	3082342	3104420	789624	25	42,160,124,81,63,122,161,36,83,46,139,63,129,73,110,81,88,190,127,150,78,144,48,74,257,	0,433,1142,2852,3083,3879,4114,4521,5212,7374,13285,13551,18157,18540,18758,19089,19417,19778,20082,20682,21177,21464,21810,22104,22412,
#Deleted in new
chr6_GL000254v2_alt	3081896	3100497	chr6_GL000254v2_alt:3081896-3100497	0	+	3081896	3081896	8553170	13	42,160,124,81,63,122,122,36,46,139,63,129,61,	0,433,1142,2852,3083,3879,4153,4521,7374,13285,13551,18157,18540,
#Deleted in new
chr6_GL000254v2_alt	3083121	3095921	chr6_GL000254v2_alt:3083121-3095921	0	+	3083121	3083121	8553170	9	41,81,63,122,110,36,46,139,474,	0,1627,1858,2654,2940,3296,6149,12060,12326,
#Deleted in new
chr6_GL000254v2_alt	3085849	3101380	chr6_GL000254v2_alt:3085849-3101380	0	+	3085849	3101380	789624	12	48,110,36,83,46,139,63,129,88,110,81,67,	0,212,568,1259,3421,9332,9598,14204,14572,14805,15136,15464,
#Deleted in new
chr6_GL000254v2_alt	3093377	3101023	chr6_GL000254v2_alt:3093377-3101023	0	+	3093377	3093377	8553170	6	158,139,63,129,110,38,	0,1804,2070,6676,7277,7608,
#Deleted in new
chr6_GL000254v2_alt	3098480	3104565	chr6_GL000254v2_alt:3098480-3104565	1	+	3100017	3104420	789624	14	325,872,73,110,81,88,190,127,150,75,144,138,74,257,	0,830,1956,2174,2505,2833,3194,3498,4098,4596,4880,5226,5520,5828,
#Deleted in new
chr6_GL000254v2_alt	3098839	3098942	chr6_GL000254v2_alt:3098839-3098942	3	-	3098839	3098839	8553170	1	103,	0,
#Deleted in new
chr6_GL000254v2_alt	3100083	3101391	chr6_GL000254v2_alt:3100083-3101391	0	+	3100083	3100083	8553170	4	99,73,110,406,	0,353,571,902,
#Deleted in new
chr6_GL000254v2_alt	3101333	3106740	chr6_GL000254v2_alt:3101333-3106740	0	+	3101333	3103677	789624	14	68,190,127,150,75,144,116,74,151,379,141,96,90,416,	0,341,645,1245,1743,2027,2305,2667,2975,3345,3970,4619,4821,4991,
#Deleted in new
chr6_GL000254v2_alt	3101805	3104565	chr6_GL000254v2_alt:3101805-3104565	0	+	3101805	3103819	789624	8	59,127,75,144,31,90,74,257,	0,173,1271,1555,1833,1949,2195,2503,
#Deleted in new
chr6_GL000254v2_alt	3102608	3105033	chr6_GL000254v2_alt:3102608-3105033	0	+	3102608	3102608	8553170	7	120,75,144,48,74,151,94,	0,468,752,1098,1392,1700,2331,
#Deleted in new
chr6_GL000254v2_alt	3103100	3104565	chr6_GL000254v2_alt:3103100-3104565	0	+	3103100	3104420	789624	5	51,144,90,74,257,	0,260,654,900,1208,
#Deleted in new
chr6_GL000254v2_alt	3103811	3104565	chr6_GL000254v2_alt:3103811-3104565	0	+	3103811	3103811	8553170	2	263,257,	0,497,
#Deleted in new
chr6_GL000254v2_alt	3104332	3106740	chr6_GL000254v2_alt:3104332-3106740	0	+	3104332	3104420	789624	4	127,141,96,586,	0,971,1620,1822,
#Deleted in new
chr6_GL000254v2_alt	3104687	3106740	chr6_GL000254v2_alt:3104687-3106740	3	+	3104943	3106420	789624	4	370,141,96,413,	0,616,1265,1640,
#Deleted in new
chr6_GL000254v2_alt	3104884	3106740	chr6_GL000254v2_alt:3104884-3106740	1	+	3104943	3106420	789624	5	173,141,96,90,416,	0,419,1068,1270,1440,
#Deleted in new
chr6_GL000254v2_alt	3104884	3106734	chr6_GL000254v2_alt:3104884-3106734	1	+	3104943	3106420	789624	4	173,141,96,410,	0,419,1068,1440,
#Deleted in new
chr6_GL000254v2_alt	3105508	3106188	chr6_GL000254v2_alt:3105508-3106188	0	+	3105508	3105508	8553170	2	540,34,	0,646,
#Deleted in new
chr6_GL000254v2_alt	3106198	3107477	chr6_GL000254v2_alt:3106198-3107477	3	-	3106198	3106198	789624	2	411,50,	0,1229,
#Deleted in new
chr6_GL000254v2_alt	3107478	3119183	chr6_GL000254v2_alt:3107478-3119183	3	-	3107482	3118668	789624	17	181,175,140,302,93,153,133,186,117,113,170,196,111,97,279,249,186,	0,293,655,873,1568,1772,2032,3427,4084,4410,7364,7652,8926,9743,10374,10956,11519,
#Deleted in new
chr6_GL000254v2_alt	3107925	3109576	chr6_GL000254v2_alt:3107925-3109576	0	-	3107925	3107925	8553170	5	21,520,93,153,66,	0,208,1121,1325,1585,
#Deleted in new
chr6_GL000254v2_alt	3108177	3119161	chr6_GL000254v2_alt:3108177-3119161	0	-	3108177	3108177	8553170	15	96,302,93,153,133,186,117,113,170,80,111,97,79,249,164,	0,174,869,1073,1333,2728,3385,3711,6665,6953,8227,9044,9875,10257,10820,
#Deleted in new
chr6_GL000254v2_alt	3113158	3114896	chr6_GL000254v2_alt:3113158-3114896	0	-	3113158	3113158	8553170	2	554,54,	0,1684,
#Deleted in new
chr6_GL000254v2_alt	3117947	3118808	chr6_GL000254v2_alt:3117947-3118808	0	-	3117947	3117947	8553170	2	184,374,	0,487,
#Deleted in new
chr6_GL000254v2_alt	3119406	3137842	chr6_GL000254v2_alt:3119406-3137842	1	-	3119482	3137106	789624	30	145,326,112,207,156,128,79,69,105,126,71,106,91,159,104,125,91,95,109,120,82,165,128,101,85,125,139,135,420,408,	0,1449,1907,2090,2480,2923,3187,3352,3501,3963,4173,4329,4569,4767,5012,5203,5578,6697,6877,7078,7729,8052,14092,14353,14699,14874,15239,15468,17313,18028,
#Deleted in new
chr6_GL000254v2_alt	3119406	3120071	chr6_GL000254v2_alt:3119406-3120071	0	-	3119406	3119406	8553170	2	145,247,	0,418,
#Deleted in new
chr6_GL000254v2_alt	3120705	3120794	chr6_GL000254v2_alt:3120705-3120794	3	-	3120705	3120705	8553170	1	89,	0,
#Deleted in new
chr6_GL000254v2_alt	3121118	3121940	chr6_GL000254v2_alt:3121118-3121940	0	-	3121118	3121118	8553170	3	63,112,444,	0,195,378,
#Deleted in new
chr6_GL000254v2_alt	3122343	3124478	chr6_GL000254v2_alt:3122343-3124478	0	-	3122343	3124478	789624	10	114,79,69,105,126,71,106,91,42,60,	0,250,415,564,1026,1236,1392,1632,1947,2075,
#Deleted in new
chr6_GL000254v2_alt	3122439	3124083	chr6_GL000254v2_alt:3122439-3124083	0	-	3122439	3122439	8553170	8	18,79,69,105,126,71,106,154,	0,154,319,468,930,1140,1296,1490,
#Deleted in new
chr6_GL000254v2_alt	3122765	3123814	chr6_GL000254v2_alt:3122765-3123814	0	-	3122765	3122765	8553170	3	62,105,445,	0,142,604,
#Deleted in new
chr6_GL000254v2_alt	3122766	3123639	chr6_GL000254v2_alt:3122766-3123639	0	-	3122766	3122766	8553170	2	61,732,	0,141,
#Deleted in new
chr6_GL000254v2_alt	3123246	3124309	chr6_GL000254v2_alt:3123246-3124309	0	-	3123246	3123246	8553170	3	249,262,334,	0,333,729,
#Deleted in new
chr6_GL000254v2_alt	3123581	3125128	chr6_GL000254v2_alt:3123581-3125128	0	-	3123581	3123581	8553170	6	69,106,91,159,316,144,	0,154,394,592,837,1403,
#Deleted in new
chr6_GL000254v2_alt	3123588	3124318	chr6_GL000254v2_alt:3123588-3124318	0	-	3123588	3123588	8553170	4	62,106,137,145,	0,147,341,585,
#Deleted in new
chr6_GL000254v2_alt	3124300	3126325	chr6_GL000254v2_alt:3124300-3126325	2	-	3124300	3124300	8553170	4	434,91,95,42,	0,684,1803,1983,
#Deleted in new
chr6_GL000254v2_alt	3126487	3134849	chr6_GL000254v2_alt:3126487-3134849	0	-	3126487	3126487	8553170	8	117,82,165,128,101,85,125,204,	0,648,971,7011,7272,7618,7793,8158,
#Deleted in new
chr6_GL000254v2_alt	3127135	3134167	chr6_GL000254v2_alt:3127135-3134167	0	-	3127135	3127135	8553170	5	82,165,128,221,62,	0,323,6363,6624,6970,
#Deleted in new
chr6_GL000254v2_alt	3134874	3137388	chr6_GL000254v2_alt:3134874-3137388	0	-	3134874	3137106	789624	2	135,669,	0,1845,
#Deleted in new
chr6_GL000254v2_alt	3139284	3148874	chr6_GL000254v2_alt:3139284-3148874	3	-	3139645	3148647	0	5	487,60,31,68,230,	0,594,1081,8680,9360,
#Deleted in new
chr6_GL000254v2_alt	3139284	3148550	chr6_GL000254v2_alt:3139284-3148550	0	-	3139284	3139284	8553170	5	487,60,31,47,142,	0,594,1081,8680,9124,
#Deleted in new
chr6_GL000254v2_alt	3139284	3148856	chr6_GL000254v2_alt:3139284-3148856	0	-	3139284	3139284	8553170	3	487,68,212,	0,8680,9360,
#Deleted in new
chr6_GL000254v2_alt	3139284	3148707	chr6_GL000254v2_alt:3139284-3148707	0	-	3139284	3139284	8553170	4	487,60,31,63,	0,594,1081,9360,
#Deleted in new
chr6_GL000254v2_alt	3139284	3148742	chr6_GL000254v2_alt:3139284-3148742	0	-	3139284	3139284	8553170	4	487,60,68,98,	0,594,8680,9360,
#Deleted in new
chr6_GL000254v2_alt	3139284	3148549	chr6_GL000254v2_alt:3139284-3148549	0	-	3139284	3139284	8553170	5	487,60,31,68,174,	0,594,1081,8680,9091,
#Deleted in new
chr6_GL000254v2_alt	3144640	3148492	chr6_GL000254v2_alt:3144640-3148492	0	-	3144640	3144640	8553170	4	42,26,68,117,	0,128,3324,3735,
#Deleted in new
chr6_GL000254v2_alt	3199728	3204866	chr6_GL000254v2_alt:3199728-3204866	0	-	3199728	3199728	8553170	3	2287,2150,179,	0,2383,4959,
#Deleted in new
chr6_GL000254v2_alt	3201121	3204976	chr6_GL000254v2_alt:3201121-3204976	3	-	3201788	3204846	789624	6	894,223,183,263,193,289,	0,990,1387,2136,2947,3566,
#Deleted in new
chr6_GL000254v2_alt	3201121	3204892	chr6_GL000254v2_alt:3201121-3204892	0	-	3202242	3204846	789624	6	894,137,183,263,193,205,	0,990,1387,2136,2947,3566,
#Deleted in new
chr6_GL000254v2_alt	3201121	3204886	chr6_GL000254v2_alt:3201121-3204886	0	-	3203460	3204846	789624	5	894,223,183,263,199,	0,990,1387,2136,3566,
#Deleted in new
chr6_GL000254v2_alt	3201121	3204875	chr6_GL000254v2_alt:3201121-3204875	0	-	3201121	3201121	8553170	4	1570,263,193,188,	0,2136,2947,3566,
#Deleted in new
chr6_GL000254v2_alt	3205261	3221066	chr6_GL000254v2_alt:3205261-3221066	1	-	3205696	3221045	789624	21	557,85,95,71,74,104,95,254,103,93,100,236,84,88,61,126,100,79,74,49,61,	0,1460,1624,1818,2123,2306,2498,2681,5959,6349,7405,7614,8116,8276,11263,11524,11732,12655,12859,13837,15744,
#Deleted in new
chr6_GL000254v2_alt	3205264	3219736	chr6_GL000254v2_alt:3205264-3219736	1	-	3205696	3217930	789624	21	554,85,95,71,74,104,95,254,103,93,100,236,84,88,61,126,100,79,74,49,109,	0,1457,1621,1815,2120,2303,2495,2678,5956,6346,7402,7611,8113,8273,11260,11521,11729,12652,12856,13834,14363,
#Deleted in new
chr6_GL000254v2_alt	3205264	3221111	chr6_GL000254v2_alt:3205264-3221111	3	-	3205696	3221045	789624	20	554,85,95,71,74,104,95,254,103,93,100,236,84,88,61,100,79,74,49,106,	0,1457,1621,1815,2120,2303,2495,2678,5956,6346,7402,7611,8113,8273,11260,11729,12652,12856,13834,15741,
#Deleted in new
chr6_GL000254v2_alt	3205646	3206750	chr6_GL000254v2_alt:3205646-3206750	0	-	3205646	3205646	8553170	2	172,220,	0,884,
#Deleted in new
chr6_GL000254v2_alt	3207759	3221032	chr6_GL000254v2_alt:3207759-3221032	0	-	3207759	3221032	789624	13	95,254,103,93,84,88,61,126,100,79,74,49,27,	0,183,3461,3851,5618,5778,8765,9026,9234,10157,10361,11339,13246,
#Deleted in new
chr6_GL000254v2_alt	3208128	3213266	chr6_GL000254v2_alt:3208128-3213266	0	-	3208128	3208128	8553170	4	68,103,93,391,	0,3092,3482,4747,
#Deleted in new
chr6_GL000254v2_alt	3211661	3213308	chr6_GL000254v2_alt:3211661-3213308	0	-	3211661	3211661	8553170	3	42,100,433,	0,1005,1214,
#Deleted in new
chr6_GL000254v2_alt	3216589	3221062	chr6_GL000254v2_alt:3216589-3221062	0	-	3216589	3216589	8553170	6	322,100,79,74,49,57,	0,404,1327,1531,2509,4416,
#Deleted in new
chr6_GL000254v2_alt	3216886	3221062	chr6_GL000254v2_alt:3216886-3221062	0	-	3216886	3216886	8553170	6	25,100,121,74,49,57,	0,107,988,1234,2212,4119,
#Deleted in new
chr6_GL000254v2_alt	3221823	3239756	chr6_GL000254v2_alt:3221823-3239756	3	-	3222148	3239749	0	28	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,102,115,135,156,41,85,254,219,67,49,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9210,9469,9709,12652,12939,13071,16511,16854,17171,17884,
#Deleted in new
chr6_GL000254v2_alt	3221823	3239294	chr6_GL000254v2_alt:3221823-3239294	1	-	3222148	3239274	789624	26	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,115,135,156,41,85,254,219,300,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9469,9709,12652,12939,13071,16511,16854,17171,
#Deleted in new
chr6_GL000254v2_alt	3221823	3239274	chr6_GL000254v2_alt:3221823-3239274	1	-	3222148	3239274	789624	27	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,102,115,135,156,41,85,254,219,280,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9210,9469,9709,12652,12939,13071,16511,16854,17171,
#Deleted in new
chr6_GL000254v2_alt	3221823	3239749	chr6_GL000254v2_alt:3221823-3239749	1	-	3222148	3239749	789624	27	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,115,135,156,41,85,254,219,67,42,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9469,9709,12652,12939,13071,16511,16854,17171,17884,
#Deleted in new
chr6_GL000254v2_alt	3221823	3238576	chr6_GL000254v2_alt:3221823-3238576	0	-	3221823	3221823	8553170	26	506,176,79,87,116,78,145,168,155,126,102,123,107,83,183,236,144,149,102,115,135,156,41,85,301,242,	0,914,1255,2940,3135,3603,4047,4633,4886,5132,6822,7016,7236,7818,8020,8282,8604,8840,9210,9469,9709,12652,12939,13071,13607,16511,
#Deleted in new
chr6_GL000254v2_alt	3221823	3228502	chr6_GL000254v2_alt:3221823-3228502	0	-	3221823	3221823	8553170	10	506,176,79,87,116,78,145,168,155,1526,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,
#Deleted in new
chr6_GL000254v2_alt	3221823	3227206	chr6_GL000254v2_alt:3221823-3227206	0	-	3221823	3221823	8553170	9	506,176,79,87,116,78,145,408,230,	0,914,1255,2940,3135,3603,4047,4633,5153,
#Deleted in new
chr6_GL000254v2_alt	3221823	3226871	chr6_GL000254v2_alt:3221823-3226871	0	-	3221823	3221823	8553170	9	506,176,79,87,116,78,145,168,162,	0,914,1255,2940,3135,3603,4047,4633,4886,
#Deleted in new
chr6_GL000254v2_alt	3225825	3226119	chr6_GL000254v2_alt:3225825-3226119	3	+	3225825	3225825	8553170	2	51,172,	0,122,
#Deleted in new
chr6_GL000254v2_alt	3225883	3229129	chr6_GL000254v2_alt:3225883-3229129	0	-	3225883	3229129	789624	7	132,168,155,144,102,123,70,	0,573,826,1093,2762,2956,3176,
#Deleted in new
chr6_GL000254v2_alt	3226737	3229184	chr6_GL000254v2_alt:3226737-3229184	0	-	3226737	3226737	8553170	4	127,105,102,345,	0,239,1908,2102,
#Deleted in new
chr6_GL000254v2_alt	3234486	3235255	chr6_GL000254v2_alt:3234486-3235255	0	-	3234486	3234486	8553170	3	145,41,361,	0,276,408,
#Deleted in new
chr6_GL000254v2_alt	3237472	3239759	chr6_GL000254v2_alt:3237472-3239759	0	-	3237472	3237472	8553170	4	1116,219,67,52,	0,1205,1522,2235,
#Deleted in new
chr6_GL000254v2_alt	3239856	3287710	chr6_GL000254v2_alt:3239856-3287710	1	+	3275708	3287393	789624	14	158,174,139,141,90,141,95,112,166,77,92,127,50,497,	0,35789,38102,39497,41409,45138,45404,45595,45823,46096,46314,46906,47159,47357,
#Deleted in new
chr6_GL000254v2_alt	3239858	3287708	chr6_GL000254v2_alt:3239858-3287708	0	+	3239858	3239858	8553170	15	156,174,99,139,141,90,141,95,112,166,77,92,127,54,495,	0,35787,36044,38100,39495,41407,45136,45402,45593,45821,46094,46312,46904,47153,47355,
#Deleted in new
chr6_GL000254v2_alt	3241681	3244067	chr6_GL000254v2_alt:3241681-3244067	3	-	3242000	3243380	789624	2	1719,156,	0,2230,
#Deleted in new
chr6_GL000254v2_alt	3243073	3281286	chr6_GL000254v2_alt:3243073-3281286	0	+	3243141	3281286	789624	5	141,174,99,141,21,	0,32572,32829,36280,38192,
#Deleted in new
chr6_GL000254v2_alt	3243073	3287710	chr6_GL000254v2_alt:3243073-3287710	1	+	3243141	3287393	0	14	141,174,99,141,90,141,95,112,166,77,92,127,50,497,	0,32572,32829,36280,38192,41921,42187,42378,42606,42879,43097,43689,43942,44140,
#Deleted in new
chr6_GL000254v2_alt	3243078	3276331	chr6_GL000254v2_alt:3243078-3276331	0	+	3243141	3276331	789624	4	136,174,99,130,	0,32567,32824,33123,
#Deleted in new
chr6_GL000254v2_alt	3262026	3279494	chr6_GL000254v2_alt:3262026-3279494	0	+	3262026	3262026	8553170	6	86,174,99,134,139,141,	0,13619,13876,14175,15932,17327,
#Deleted in new
chr6_GL000254v2_alt	3262069	3270981	chr6_GL000254v2_alt:3262069-3270981	0	+	3269839	3270981	789624	4	43,145,210,163,	0,7671,7972,8749,
#Deleted in new
chr6_GL000254v2_alt	3262181	3278026	chr6_GL000254v2_alt:3262181-3278026	0	+	3262181	3262181	8553170	5	67,174,99,134,68,	0,13464,13721,14020,15777,
#Deleted in new
chr6_GL000254v2_alt	3269563	3287710	chr6_GL000254v2_alt:3269563-3287710	1	+	3269839	3287393	0	16	322,174,99,134,139,141,90,141,95,112,166,77,92,127,50,497,	0,6082,6339,6638,8395,9790,11702,15431,15697,15888,16116,16389,16607,17199,17452,17650,
#Deleted in new
chr6_GL000254v2_alt	3269563	3287710	chr6_GL000254v2_alt:3269563-3287710	1	+	3270110	3287393	789624	18	322,238,186,174,99,134,139,141,90,141,95,112,166,77,92,127,50,497,	0,478,1255,6082,6339,6638,8395,9790,11702,15431,15697,15888,16116,16389,16607,17199,17452,17650,
#Deleted in new
chr6_GL000254v2_alt	3269578	3287708	chr6_GL000254v2_alt:3269578-3287708	3	+	3269839	3287393	0	18	307,210,186,174,99,134,139,141,90,141,95,112,166,77,92,127,50,495,	0,463,1240,6067,6324,6623,8380,9775,11687,15416,15682,15873,16101,16374,16592,17184,17437,17635,
#Deleted in new
chr6_GL000254v2_alt	3269611	3275766	chr6_GL000254v2_alt:3269611-3275766	0	+	3269839	3275766	789624	3	274,210,121,	0,430,6034,
#Deleted in new
chr6_GL000254v2_alt	3269617	3285355	chr6_GL000254v2_alt:3269617-3285355	0	+	3269839	3285355	789624	9	268,174,99,134,139,141,90,141,95,	0,6028,6285,6584,8341,9736,11648,15377,15643,
#Deleted in new
chr6_GL000254v2_alt	3269789	3277094	chr6_GL000254v2_alt:3269789-3277094	0	+	3269789	3269789	8553170	6	96,210,186,174,99,893,	0,252,1029,5856,6113,6412,
#Deleted in new
chr6_GL000254v2_alt	3269849	3287708	chr6_GL000254v2_alt:3269849-3287708	1	+	3269851	3287393	789624	14	36,174,99,141,90,141,95,112,166,77,92,127,50,495,	0,5796,6053,9504,11416,15145,15411,15602,15830,16103,16321,16913,17166,17364,
#Deleted in new
chr6_GL000254v2_alt	3274383	3276318	chr6_GL000254v2_alt:3274383-3276318	0	+	3274383	3274383	8553170	4	146,174,99,117,	0,1262,1519,1818,
#Deleted in new
chr6_GL000254v2_alt	3276318	3285794	chr6_GL000254v2_alt:3276318-3285794	0	+	3276318	3276318	8553170	8	17,139,141,90,185,95,112,115,	0,1640,3035,4947,8632,8942,9133,9361,
#Deleted in new
chr6_GL000254v2_alt	3276484	3283759	chr6_GL000254v2_alt:3276484-3283759	3	-	3276484	3276484	789624	3	184,63,540,	0,891,6735,
#Deleted in new
chr6_GL000254v2_alt	3278090	3287708	chr6_GL000254v2_alt:3278090-3287708	0	+	3278090	3278090	8553170	10	1404,90,141,95,112,166,77,92,127,495,	0,3175,6904,7170,7361,7589,7862,8080,8672,9123,
#Deleted in new
chr6_GL000254v2_alt	3285708	3287708	chr6_GL000254v2_alt:3285708-3287708	0	+	3285708	3285708	8553170	6	137,77,92,127,50,211,	0,244,462,1054,1307,1789,
#Deleted in new
chr6_GL000254v2_alt	3287685	3294120	chr6_GL000254v2_alt:3287685-3294120	1	+	3288257	3294066	0	19	51,166,234,186,174,102,137,139,132,102,138,98,118,154,77,101,133,50,210,	0,470,723,1357,1698,2092,2295,2724,3180,3593,3770,4400,4636,4969,5218,5494,5691,5905,6225,
#Deleted in new
chr6_GL000254v2_alt	3288029	3294120	chr6_GL000254v2_alt:3288029-3294120	1	+	3288257	3294066	0	18	292,234,186,174,102,137,139,132,102,138,98,118,154,77,101,133,50,210,	0,379,1013,1354,1748,1951,2380,2836,3249,3426,4056,4292,4625,4874,5150,5347,5561,5881,
#Deleted in new
chr6_GL000254v2_alt	3288132	3288904	chr6_GL000254v2_alt:3288132-3288904	0	+	3288132	3288132	8553170	2	189,496,	0,276,
#Deleted in new
chr6_GL000254v2_alt	3288161	3289879	chr6_GL000254v2_alt:3288161-3289879	0	+	3288161	3288161	8553170	5	160,121,186,174,102,	0,360,881,1222,1616,
#Deleted in new
chr6_GL000254v2_alt	3288257	3292681	chr6_GL000254v2_alt:3288257-3292681	0	+	3288257	3288257	8553170	12	64,234,186,174,102,137,139,132,102,138,98,360,	0,151,785,1126,1520,1723,2152,2608,3021,3198,3828,4064,
#Deleted in new
chr6_GL000254v2_alt	3289316	3291587	chr6_GL000254v2_alt:3289316-3291587	2	+	3289316	3289316	8553170	6	241,102,568,132,102,132,	0,461,664,1549,1962,2139,
#Deleted in new
chr6_GL000254v2_alt	3289832	3291634	chr6_GL000254v2_alt:3289832-3291634	0	+	3289832	3289832	8553170	6	47,137,139,132,102,179,	0,148,577,1033,1446,1623,
#Deleted in new
chr6_GL000254v2_alt	3290393	3291634	chr6_GL000254v2_alt:3290393-3291634	0	+	3290393	3290393	8553170	4	155,132,102,179,	0,472,885,1062,
#Deleted in new
chr6_GL000254v2_alt	3291033	3291634	chr6_GL000254v2_alt:3291033-3291634	0	+	3291033	3291033	8553170	2	347,179,	0,422,
#Deleted in new
chr6_GL000254v2_alt	3291766	3293280	chr6_GL000254v2_alt:3291766-3293280	0	+	3291766	3291766	8553170	4	417,487,77,101,	0,555,1137,1413,
#Deleted in new
chr6_GL000254v2_alt	3292909	3294120	chr6_GL000254v2_alt:3292909-3294120	0	+	3292909	3292909	8553170	4	371,133,50,210,	0,467,681,1001,
#Deleted in new
chr6_GL000254v2_alt	3293450	3294120	chr6_GL000254v2_alt:3293450-3294120	0	+	3293450	3293450	8553170	2	59,530,	0,140,
#Deleted in new
chr6_GL000254v2_alt	3294122	3301128	chr6_GL000254v2_alt:3294122-3301128	1	-	3294336	3300482	0	11	312,103,55,145,338,38,75,146,70,83,201,	0,1642,1993,2211,2468,2972,3132,4606,4854,6285,6805,
#Deleted in new
chr6_GL000254v2_alt	3294263	3300980	chr6_GL000254v2_alt:3294263-3300980	0	-	3294263	3294263	8553170	10	171,406,145,338,38,75,146,70,83,53,	0,1501,2070,2327,2831,2991,4465,4713,6144,6664,
#Deleted in new
chr6_GL000254v2_alt	3294263	3300955	chr6_GL000254v2_alt:3294263-3300955	0	-	3294263	3294263	8553170	9	171,103,55,145,542,75,146,70,548,	0,1501,1852,2070,2327,2991,4465,4713,6144,
#Deleted in new
chr6_GL000254v2_alt	3295793	3300993	chr6_GL000254v2_alt:3295793-3300993	0	-	3295793	3300482	789624	10	74,55,145,323,38,75,146,70,83,66,	0,322,540,797,1301,1461,2935,3183,4614,5134,
#Deleted in new
chr6_GL000254v2_alt	3296339	3300515	chr6_GL000254v2_alt:3296339-3300515	0	-	3296339	3300482	789624	7	139,338,38,75,146,70,108,	0,251,755,915,2389,2637,4068,
#Deleted in new
chr6_GL000254v2_alt	3296595	3300607	chr6_GL000254v2_alt:3296595-3300607	0	-	3296595	3300482	789624	6	318,38,75,146,70,200,	0,499,659,2133,2381,3812,
#Deleted in new
chr6_GL000254v2_alt	3296785	3301074	chr6_GL000254v2_alt:3296785-3301074	0	-	3296785	3296785	8553170	6	347,75,146,70,83,147,	0,469,1943,2191,3622,4142,
#Deleted in new
chr6_GL000254v2_alt	3296808	3301004	chr6_GL000254v2_alt:3296808-3301004	0	-	3296808	3296808	8553170	7	30,38,75,146,70,147,77,	0,286,446,1920,2168,3535,4119,
#Deleted in new
chr6_GL000254v2_alt	3296855	3300895	chr6_GL000254v2_alt:3296855-3300895	0	-	3296855	3300482	789624	7	73,38,75,146,70,83,280,	0,239,399,1873,2121,3552,3760,
#Deleted in new
chr6_GL000254v2_alt	3297100	3301001	chr6_GL000254v2_alt:3297100-3301001	0	-	3297100	3297100	8553170	5	32,75,318,83,74,	0,154,1628,3307,3827,
#Deleted in new
chr6_GL000254v2_alt	3297254	3300990	chr6_GL000254v2_alt:3297254-3300990	2	-	3297254	3297254	8553170	6	75,146,70,118,83,63,	0,1474,1722,2099,3153,3673,
#Deleted in new
chr6_GL000254v2_alt	3299435	3300482	chr6_GL000254v2_alt:3299435-3300482	1	-	3299435	3300482	789624	2	36,75,	0,972,
#Deleted in new
chr6_GL000254v2_alt	3301115	3311787	chr6_GL000254v2_alt:3301115-3311787	3	+	3301228	3311751	789624	28	135,104,110,118,115,75,54,191,129,146,147,85,107,147,97,213,111,231,138,138,105,148,127,211,111,219,141,237,	0,217,930,1140,1352,1586,1961,2116,2467,2829,3359,3634,3905,4333,4557,4833,5152,6703,7629,7924,8193,8635,8876,9248,9606,9791,10200,10435,
#Deleted in new
chr6_GL000254v2_alt	3301152	3303422	chr6_GL000254v2_alt:3301152-3303422	0	+	3301152	3301152	8553170	8	98,104,110,118,115,75,54,46,	0,180,893,1103,1315,1549,1924,2224,
#Deleted in new
chr6_GL000254v2_alt	3301174	3304619	chr6_GL000254v2_alt:3301174-3304619	0	+	3301174	3301174	8553170	5	76,46,129,146,145,	0,2202,2408,2770,3300,
#Deleted in new
chr6_GL000254v2_alt	3301183	3311787	chr6_GL000254v2_alt:3301183-3311787	0	+	3301183	3301183	8553170	23	67,104,110,118,115,75,635,146,147,378,147,97,213,111,231,138,138,105,148,127,211,467,472,	0,149,862,1072,1284,1518,1893,2761,3291,3566,4265,4489,4765,5084,6635,7561,7856,8125,8567,8808,9180,9475,10132,
#Deleted in new
chr6_GL000254v2_alt	3301226	3301994	chr6_GL000254v2_alt:3301226-3301994	0	+	3301226	3301226	8553170	2	24,662,	0,106,
#Deleted in new
chr6_GL000254v2_alt	3301228	3303261	chr6_GL000254v2_alt:3301228-3303261	1	+	3301228	3303261	789624	4	22,104,54,30,	0,104,1848,2003,
#Deleted in new
chr6_GL000254v2_alt	3303532	3305046	chr6_GL000254v2_alt:3303532-3305046	0	+	3303532	3303532	8553170	5	179,146,147,85,26,	0,412,942,1217,1488,
#Deleted in new
chr6_GL000254v2_alt	3308863	3310480	chr6_GL000254v2_alt:3308863-3310480	0	+	3308863	3308863	8553170	6	19,138,105,148,168,113,	0,176,445,887,1128,1504,
#Deleted in new
chr6_GL000254v2_alt	3309056	3310484	chr6_GL000254v2_alt:3309056-3310484	0	+	3309056	3309056	8553170	4	121,105,148,493,	0,252,694,935,
#Deleted in new
chr6_GL000254v2_alt	3309138	3311022	chr6_GL000254v2_alt:3309138-3311022	0	+	3309138	3309138	8553170	6	39,105,148,127,211,301,	0,170,612,853,1225,1583,
#Deleted in new
chr6_GL000254v2_alt	3310358	3311787	chr6_GL000254v2_alt:3310358-3311787	0	+	3310358	3310358	8553170	4	139,189,141,237,	0,578,957,1192,
#Deleted in new
chr6_GL000254v2_alt	3310489	3311444	chr6_GL000254v2_alt:3310489-3311444	0	+	3310489	3310489	8553170	3	85,111,538,	0,232,417,
#Deleted in new
chr6_GL000254v2_alt	3310510	3311787	chr6_GL000254v2_alt:3310510-3311787	0	+	3310510	3310510	8553170	4	64,111,219,472,	0,211,396,805,
#Deleted in new
chr6_GL000254v2_alt	3310515	3311787	chr6_GL000254v2_alt:3310515-3311787	0	+	3310515	3310515	8553170	4	59,174,219,472,	0,143,391,800,
#Deleted in new
chr6_GL000254v2_alt	3310721	3311787	chr6_GL000254v2_alt:3310721-3311787	0	+	3310721	3310721	8553170	4	111,219,37,237,	0,185,594,829,
#Deleted in new
chr6_GL000254v2_alt	3311845	3314172	chr6_GL000254v2_alt:3311845-3314172	1	-	3311912	3313711	789624	7	215,95,136,220,236,406,208,	0,299,533,796,1102,1510,2119,
#Deleted in new
chr6_GL000254v2_alt	3311845	3314007	chr6_GL000254v2_alt:3311845-3314007	1	-	3311912	3313711	789624	6	215,95,136,220,236,652,	0,299,533,796,1102,1510,
#Deleted in new
chr6_GL000254v2_alt	3311845	3314328	chr6_GL000254v2_alt:3311845-3314328	3	-	3311912	3313711	789624	7	215,95,136,220,236,362,364,	0,299,533,796,1102,1510,2119,
#Deleted in new
chr6_GL000254v2_alt	3311845	3313721	chr6_GL000254v2_alt:3311845-3313721	0	-	3311845	3311845	8553170	5	215,95,483,236,366,	0,299,533,1102,1510,
#Deleted in new
chr6_GL000254v2_alt	3311845	3314274	chr6_GL000254v2_alt:3311845-3314274	0	-	3311845	3311845	8553170	6	215,95,136,147,236,310,	0,299,533,796,1102,2119,
#Deleted in new
chr6_GL000254v2_alt	3311845	3313719	chr6_GL000254v2_alt:3311845-3313719	0	-	3311845	3311845	8553170	2	1338,364,	0,1510,
#Deleted in new
chr6_GL000254v2_alt	3311845	3314131	chr6_GL000254v2_alt:3311845-3314131	0	-	3311845	3311845	8553170	3	215,1039,776,	0,299,1510,
#Deleted in new
chr6_GL000254v2_alt	3311845	3314245	chr6_GL000254v2_alt:3311845-3314245	0	-	3311845	3311845	8553170	5	215,95,136,542,890,	0,299,533,796,1510,
#Deleted in new
chr6_GL000254v2_alt	3311845	3314288	chr6_GL000254v2_alt:3311845-3314288	0	-	3311845	3311845	8553170	4	215,95,136,1647,	0,299,533,796,
#Deleted in new
chr6_GL000254v2_alt	3311845	3312893	chr6_GL000254v2_alt:3311845-3312893	0	-	3311845	3311845	8553170	4	215,95,36,265,	0,299,533,783,
#Deleted in new
chr6_GL000254v2_alt	3312419	3314172	chr6_GL000254v2_alt:3312419-3314172	0	-	3312419	3312419	8553170	5	95,147,236,406,208,	0,222,528,936,1545,
#Deleted in new
chr6_GL000254v2_alt	3312646	3314134	chr6_GL000254v2_alt:3312646-3314134	0	-	3312646	3312646	8553170	4	142,228,262,170,	0,301,709,1318,
#Deleted in new
chr6_GL000254v2_alt	3312678	3314025	chr6_GL000254v2_alt:3312678-3314025	0	-	3312678	3312678	8553170	3	110,236,670,	0,269,677,
#Deleted in new
chr6_GL000254v2_alt	3312937	3314045	chr6_GL000254v2_alt:3312937-3314045	0	-	3312937	3312937	8553170	3	246,406,81,	0,418,1027,
#Deleted in new
chr6_GL000254v2_alt	3313210	3321047	chr6_GL000254v2_alt:3313210-3321047	0	+	3313210	3313210	8553170	4	100,643,137,108,	0,694,1446,7729,
#Deleted in new
chr6_GL000254v2_alt	3313904	3323483	chr6_GL000254v2_alt:3313904-3323483	3	+	3314032	3323086	789624	8	348,210,137,96,140,98,148,443,	0,433,752,7035,7546,8583,8786,9136,
#Deleted in new
chr6_GL000254v2_alt	3313979	3323483	chr6_GL000254v2_alt:3313979-3323483	1	+	3314032	3323086	789624	8	273,210,137,108,140,98,148,443,	0,358,677,6960,7471,8508,8711,9061,
#Deleted in new
chr6_GL000254v2_alt	3314375	3323483	chr6_GL000254v2_alt:3314375-3323483	0	+	3314375	3314375	8553170	6	172,137,96,1135,148,443,	0,281,6564,7075,8315,8665,
#Deleted in new
chr6_GL000254v2_alt	3314388	3323483	chr6_GL000254v2_alt:3314388-3323483	0	+	3314388	3314388	8553170	3	159,80,443,	0,8370,8652,
#Deleted in new
chr6_GL000254v2_alt	3314416	3323225	chr6_GL000254v2_alt:3314416-3323225	0	+	3314416	3321019	789624	6	131,96,140,98,148,185,	0,6523,7034,8071,8274,8624,
#Deleted in new
chr6_GL000254v2_alt	3314423	3323483	chr6_GL000254v2_alt:3314423-3323483	0	+	3314423	3314423	8553170	6	124,96,140,98,148,443,	0,6516,7027,8064,8267,8617,
#Deleted in new
chr6_GL000254v2_alt	3314426	3315454	chr6_GL000254v2_alt:3314426-3315454	0	+	3314426	3314426	8553170	2	121,798,	0,230,
#Deleted in new
chr6_GL000254v2_alt	3314590	3323483	chr6_GL000254v2_alt:3314590-3323483	0	+	3314590	3314590	8553170	6	203,96,140,98,148,443,	0,6349,6860,7897,8100,8450,
#Deleted in new
chr6_GL000254v2_alt	3314613	3321899	chr6_GL000254v2_alt:3314613-3321899	0	+	3314613	3314613	8553170	3	180,96,449,	0,6326,6837,
#Deleted in new
chr6_GL000254v2_alt	3314617	3322838	chr6_GL000254v2_alt:3314617-3322838	0	+	3314617	3314617	8553170	5	338,96,140,98,148,	0,6322,6833,7870,8073,
#Deleted in new
chr6_GL000254v2_alt	3322427	3323483	chr6_GL000254v2_alt:3322427-3323483	0	+	3322427	3322427	8553170	2	411,443,	0,613,
#Deleted in new
chr6_GL000254v2_alt	3324060	3324087	chr6_GL000254v2_alt:3324060-3324087	3	+	3324060	3324060	8553170	1	27,	0,
#Deleted in new
chr6_GL000254v2_alt	3349968	3350487	chr6_GL000254v2_alt:3349968-3350487	7	+	3349968	3349968	16724991	2	104,318,	0,201,
#Deleted in new
chr6_GL000254v2_alt	3349968	3350435	chr6_GL000254v2_alt:3349968-3350435	5	+	3349968	3349968	16724991	2	104,266,	0,201,
#Deleted in new
chr6_GL000254v2_alt	3350649	3354508	chr6_GL000254v2_alt:3350649-3354508	7	-	3350649	3350649	16724991	13	102,164,162,97,152,133,131,144,120,53,123,336,321,	0,422,663,917,1107,1351,1603,1827,2089,2372,2539,2913,3538,
#Deleted in new
chr6_GL000254v2_alt	3355305	3355823	chr6_GL000254v2_alt:3355305-3355823	7	+	3355305	3355305	16724991	3	17,148,46,	0,122,472,
#Deleted in new
chr6_GL000254v2_alt	3356797	3377455	chr6_GL000254v2_alt:3356797-3377455	3	+	3356881	3377314	0	41	149,199,202,71,89,83,97,106,133,116,180,183,186,159,127,75,198,112,71,140,210,52,90,210,76,157,117,172,233,168,60,94,187,91,75,103,90,99,84,133,283,	0,281,694,1105,1254,1561,1814,2049,2252,9168,9383,9708,10023,10362,10772,11066,11401,11690,11892,12221,12474,12928,13081,13306,13695,13931,14183,14405,14805,15120,15681,16790,16981,17282,17463,19029,19297,19472,19753,20099,20375,
#Deleted in new
chr6_GL000254v2_alt	3356830	3377454	chr6_GL000254v2_alt:3356830-3377454	1	+	3356881	3377314	789624	40	116,199,202,71,89,83,97,106,133,116,180,183,186,159,127,75,198,112,71,140,210,52,90,210,76,157,117,172,233,168,60,94,140,75,103,90,99,84,133,282,	0,248,661,1072,1221,1528,1781,2016,2219,9135,9350,9675,9990,10329,10739,11033,11368,11657,11859,12188,12441,12895,13048,13273,13662,13898,14150,14372,14772,15087,15648,16757,16948,17430,18996,19264,19439,19720,20066,20342,
#Deleted in new
chr6_GL000254v2_alt	3357616	3358333	chr6_GL000254v2_alt:3357616-3358333	0	+	3357616	3357616	8553170	2	77,431,	0,286,
#Deleted in new
chr6_GL000254v2_alt	3357654	3359172	chr6_GL000254v2_alt:3357654-3359172	0	+	3357654	3357654	8553170	5	39,71,89,83,123,	0,248,397,704,1395,
#Deleted in new
chr6_GL000254v2_alt	3366950	3368750	chr6_GL000254v2_alt:3366950-3368750	0	+	3366950	3366950	8553170	6	56,159,127,75,198,263,	0,209,619,913,1248,1537,
#Deleted in new
chr6_GL000254v2_alt	3369882	3370394	chr6_GL000254v2_alt:3369882-3370394	0	+	3369882	3369882	8553170	2	86,291,	0,221,
#Deleted in new
chr6_GL000254v2_alt	3370728	3373610	chr6_GL000254v2_alt:3370728-3373610	0	+	3370728	3370728	8553170	7	157,117,172,173,168,60,23,	0,252,474,934,1189,1750,2859,
#Deleted in new
chr6_GL000254v2_alt	3372515	3374493	chr6_GL000254v2_alt:3372515-3374493	0	+	3372515	3372515	8553170	5	23,94,187,91,233,	0,1072,1263,1564,1745,
#Deleted in new
chr6_GL000254v2_alt	3373624	3374304	chr6_GL000254v2_alt:3373624-3374304	0	+	3373624	3373624	8553170	2	57,526,	0,154,
#Deleted in new
chr6_GL000254v2_alt	3373928	3377455	chr6_GL000254v2_alt:3373928-3377455	0	+	3373928	3373928	8553170	8	37,91,75,103,90,99,479,283,	0,151,332,1898,2166,2341,2622,3244,
#Deleted in new
chr6_GL000254v2_alt	3373973	3377455	chr6_GL000254v2_alt:3373973-3377455	0	+	3373973	3373973	8553170	8	197,75,103,90,99,84,133,283,	0,287,1853,2121,2296,2577,2923,3199,
#Deleted in new
chr6_GL000254v2_alt	3374765	3378295	chr6_GL000254v2_alt:3374765-3378295	3	-	3374765	3374765	8553170	2	1577,502,	0,3028,
#Deleted in new
chr6_GL000254v2_alt	3375771	3377455	chr6_GL000254v2_alt:3375771-3377455	0	+	3375771	3375771	8553170	6	158,90,99,84,133,283,	0,323,498,779,1125,1401,
#Deleted in new
chr6_GL000254v2_alt	3375900	3377039	chr6_GL000254v2_alt:3375900-3377039	0	+	3375900	3375900	8553170	2	29,945,	0,194,
#Deleted in new
chr6_GL000254v2_alt	3376033	3376642	chr6_GL000254v2_alt:3376033-3376642	0	+	3376033	3376033	8553170	2	151,373,	0,236,
#Deleted in new
chr6_GL000254v2_alt	3380334	3383675	chr6_GL000254v2_alt:3380334-3383675	3	+	3380459	3383167	0	10	324,90,155,102,102,87,201,179,104,774,	0,421,792,1054,1244,1447,1703,2104,2366,2567,
#Deleted in new
chr6_GL000254v2_alt	3380352	3381480	chr6_GL000254v2_alt:3380352-3381480	0	+	3380352	3380352	8553170	4	306,44,147,92,	0,403,782,1036,
#Deleted in new
chr6_GL000254v2_alt	3380401	3383675	chr6_GL000254v2_alt:3380401-3383675	0	+	3380401	3380401	8553170	9	444,155,102,62,87,201,179,104,774,	0,725,987,1217,1380,1636,2037,2299,2500,
#Deleted in new
chr6_GL000254v2_alt	3380401	3383675	chr6_GL000254v2_alt:3380401-3383675	0	+	3380401	3380401	8553170	8	444,155,102,102,87,179,104,774,	0,725,987,1177,1380,2037,2299,2500,
#Deleted in new
chr6_GL000254v2_alt	3380401	3383675	chr6_GL000254v2_alt:3380401-3383675	0	+	3380401	3380401	8553170	9	257,90,155,102,102,87,201,366,774,	0,354,725,987,1177,1380,1636,2037,2500,
#Deleted in new
chr6_GL000254v2_alt	3380406	3383675	chr6_GL000254v2_alt:3380406-3383675	0	+	3380406	3380406	8553170	9	439,174,102,102,87,201,179,104,774,	0,701,982,1172,1375,1631,2032,2294,2495,
#Deleted in new
chr6_GL000254v2_alt	3380451	3383703	chr6_GL000254v2_alt:3380451-3383703	1	+	3380459	3383167	789624	9	207,155,102,102,87,201,179,104,802,	0,675,937,1127,1330,1586,1987,2249,2450,
#Deleted in new
chr6_GL000254v2_alt	3380451	3381516	chr6_GL000254v2_alt:3380451-3381516	0	+	3380451	3380451	8553170	4	207,90,155,128,	0,304,675,937,
#Deleted in new
chr6_GL000254v2_alt	3380451	3381584	chr6_GL000254v2_alt:3380451-3381584	0	+	3380451	3380451	8553170	5	207,90,174,102,6,	0,304,656,937,1127,
#Deleted in new
chr6_GL000254v2_alt	3380451	3381148	chr6_GL000254v2_alt:3380451-3381148	0	+	3380451	3380451	8553170	2	207,393,	0,304,
#Deleted in new
chr6_GL000254v2_alt	3383187	3451394	chr6_GL000254v2_alt:3383187-3451394	1	-	3383381	3440224	789624	44	296,164,162,97,152,133,131,144,120,144,123,336,321,282,279,288,318,291,324,291,324,318,333,324,327,297,324,318,315,309,288,309,306,333,306,291,297,369,264,157,116,1839,411,194,	0,616,857,1111,1300,1544,1796,2020,2282,2594,2852,3226,3851,5020,6579,7208,8115,8843,11515,12233,14696,15431,16903,20242,21002,23666,26519,27248,27680,28411,28985,30850,32507,37877,40211,40879,43256,44593,47625,48063,53914,54449,56634,68013,
#Deleted in new
chr6_GL000254v2_alt	3383187	3388640	chr6_GL000254v2_alt:3383187-3388640	0	-	3383187	3383187	8553170	14	296,164,162,97,152,133,131,144,120,144,123,336,321,433,	0,616,857,1111,1300,1544,1796,2020,2282,2594,2852,3226,3851,5020,
#Deleted in new
chr6_GL000254v2_alt	3383187	3388161	chr6_GL000254v2_alt:3383187-3388161	0	-	3383187	3383187	8553170	13	296,164,162,97,152,133,131,144,120,144,123,336,1123,	0,616,857,1111,1300,1544,1796,2020,2282,2594,2852,3226,3851,
#Deleted in new
chr6_GL000254v2_alt	3383187	3451394	chr6_GL000254v2_alt:3383187-3451394	3	-	3383381	3440224	789624	44	296,164,162,97,152,133,131,144,120,144,123,336,321,282,279,288,318,324,324,318,324,318,333,324,327,297,324,318,315,309,288,309,306,333,306,291,297,369,264,157,116,1839,411,194,	0,616,857,1111,1300,1544,1796,2020,2282,2594,2852,3226,3851,5020,6579,7208,8115,8843,11515,12233,14696,15431,16903,20242,21002,23666,26519,27248,27680,28411,28985,30850,32507,37877,40211,40879,43256,44593,47625,48063,53914,54449,56634,68013,
#Deleted in new
chr6_GL000254v2_alt	3384298	3385485	chr6_GL000254v2_alt:3384298-3385485	0	-	3384298	3384298	8553170	5	97,152,383,144,16,	0,189,433,909,1171,
#Deleted in new
chr6_GL000254v2_alt	3420539	3420660	chr6_GL000254v2_alt:3420539-3420660	3	-	3420539	3420539	8553170	1	121,	0,
#Deleted in new
chr6_GL000254v2_alt	3437604	3451241	chr6_GL000254v2_alt:3437604-3451241	0	-	3437604	3437604	8553170	2	2628,41,	0,13596,
#Deleted in new
chr6_GL000254v2_alt	3440201	3457354	chr6_GL000254v2_alt:3440201-3457354	0	-	3440201	3440224	789624	2	31,341,	0,16812,
#Deleted in new
chr6_GL000254v2_alt	3440201	3459630	chr6_GL000254v2_alt:3440201-3459630	0	-	3440201	3440201	8553170	5	31,112,71,82,24,	0,18522,18855,19141,19405,
#Deleted in new
chr6_GL000254v2_alt	3457283	3470260	chr6_GL000254v2_alt:3457283-3470260	1	-	3457758	3470227	789624	18	705,85,112,71,82,108,180,92,186,134,132,136,86,136,92,79,80,124,	0,1216,1440,1773,2059,2323,2595,3511,3692,4560,5507,5725,5999,10853,11839,12178,12407,12853,
#Deleted in new
chr6_GL000254v2_alt	3457283	3470273	chr6_GL000254v2_alt:3457283-3470273	3	-	3457758	3470227	789624	18	705,85,112,71,82,108,180,92,186,134,132,136,86,136,92,79,80,128,	0,1216,1440,1773,2059,2323,2595,3511,3692,4560,5507,5725,5999,10853,11839,12178,12407,12862,
#Deleted in new
chr6_GL000254v2_alt	3458727	3459911	chr6_GL000254v2_alt:3458727-3459911	0	-	3458727	3459911	789624	5	108,94,82,108,33,	0,329,615,879,1151,
#Deleted in new
chr6_GL000254v2_alt	3460796	3462039	chr6_GL000254v2_alt:3460796-3462039	0	-	3460796	3460796	8553170	2	365,196,	0,1047,
#Deleted in new
chr6_GL000254v2_alt	3460850	3462440	chr6_GL000254v2_alt:3460850-3462440	0	-	3460850	3460850	8553170	3	36,186,597,	0,125,993,
#Deleted in new
chr6_GL000254v2_alt	3462461	3470242	chr6_GL000254v2_alt:3462461-3470242	0	-	3462461	3462461	8553170	8	461,136,86,136,92,79,80,106,	0,547,821,5675,6661,7000,7229,7675,
#Deleted in new
chr6_GL000254v2_alt	3462528	3469787	chr6_GL000254v2_alt:3462528-3469787	0	-	3462528	3462528	8553170	7	394,136,86,136,92,79,97,	0,480,754,5608,6594,6933,7162,
#Deleted in new
chr6_GL000254v2_alt	3468061	3470238	chr6_GL000254v2_alt:3468061-3470238	0	-	3468061	3468061	8553170	5	211,92,79,80,102,	0,1061,1400,1629,2075,
#Deleted in new
chr6_GL000254v2_alt	3470726	3472311	chr6_GL000254v2_alt:3470726-3472311	3	-	3470750	3471800	789624	2	1148,197,	0,1388,
#Deleted in new
chr6_GL000254v2_alt	3490373	3495098	chr6_GL000254v2_alt:3490373-3495098	1	-	3491236	3494117	789624	6	1040,186,216,91,81,112,	0,1178,2009,3450,3736,4613,
#Deleted in new
chr6_GL000254v2_alt	3490373	3493967	chr6_GL000254v2_alt:3490373-3493967	3	-	3491236	3493842	789624	4	1040,186,539,144,	0,1178,2009,3450,
#Deleted in new
chr6_GL000254v2_alt	3490373	3493952	chr6_GL000254v2_alt:3490373-3493952	0	-	3490373	3490373	8553170	3	1040,186,129,	0,1178,3450,
#Deleted in new
chr6_GL000254v2_alt	3490373	3493938	chr6_GL000254v2_alt:3490373-3493938	0	-	3490373	3490373	8553170	3	1040,186,1556,	0,1178,2009,
#Deleted in new
chr6_GL000254v2_alt	3490373	3491872	chr6_GL000254v2_alt:3490373-3491872	0	-	3490373	3490373	8553170	2	1040,321,	0,1178,
#Deleted in new
chr6_GL000254v2_alt	3492509	3496388	chr6_GL000254v2_alt:3492509-3496388	0	-	3492509	3494117	789624	5	89,91,81,100,136,	0,1314,1600,3242,3743,
#Deleted in new
chr6_GL000254v2_alt	3493995	3495975	chr6_GL000254v2_alt:3493995-3495975	0	-	3493995	3493995	8553170	3	195,201,224,	0,991,1756,
#Deleted in new
chr6_GL000254v2_alt	3494816	3495923	chr6_GL000254v2_alt:3494816-3495923	0	-	3494816	3494816	8553170	2	371,172,	0,935,
#Deleted in new
chr6_GL000254v2_alt	3494816	3496380	chr6_GL000254v2_alt:3494816-3496380	0	-	3494816	3494816	789624	3	371,100,77,	0,935,1487,
#Deleted in new
chr6_GL000254v2_alt	3494816	3496348	chr6_GL000254v2_alt:3494816-3496348	0	-	3494816	3494816	789624	3	371,100,96,	0,935,1436,
#Deleted in new
chr6_GL000254v2_alt	3495354	3496354	chr6_GL000254v2_alt:3495354-3496354	0	-	3495354	3495354	789624	3	320,71,102,	0,426,898,
#Deleted in new
chr6_GL000254v2_alt	3495399	3496341	chr6_GL000254v2_alt:3495399-3496341	0	-	3495399	3495399	789624	3	275,71,158,	0,381,784,
#Deleted in new
chr6_GL000254v2_alt	3495455	3497997	chr6_GL000254v2_alt:3495455-3497997	0	+	3496609	3497997	789624	6	196,209,191,154,96,108,	0,755,1146,1589,2251,2434,
#Deleted in new
chr6_GL000254v2_alt	3495537	3505699	chr6_GL000254v2_alt:3495537-3505699	1	+	3495641	3504971	0	9	114,191,154,96,108,84,85,55,872,	0,1064,1507,2169,2352,4118,4321,9051,9290,
#Deleted in new
chr6_GL000254v2_alt	3495556	3499868	chr6_GL000254v2_alt:3495556-3499868	0	+	3495556	3495556	8553170	6	95,191,96,108,84,10,	0,1045,2150,2333,4099,4302,
#Deleted in new
chr6_GL000254v2_alt	3495591	3505699	chr6_GL000254v2_alt:3495591-3505699	1	+	3496609	3504971	789624	10	60,406,191,154,96,108,84,85,55,872,	0,422,1010,1453,2115,2298,4064,4267,8997,9236,
#Deleted in new
chr6_GL000254v2_alt	3495859	3510302	chr6_GL000254v2_alt:3495859-3510302	2	+	3496609	3508220	0	16	560,191,154,96,108,84,85,55,79,483,110,96,171,80,154,372,	0,742,1185,1847,2030,3796,3999,8729,10740,12299,12862,13071,13248,13511,13664,14071,
#Deleted in new
chr6_GL000254v2_alt	3496013	3505701	chr6_GL000254v2_alt:3496013-3505701	1	+	3496609	3504971	789624	9	406,191,154,96,108,84,85,55,874,	0,588,1031,1693,1876,3642,3845,8575,8814,
#Deleted in new
chr6_GL000254v2_alt	3496109	3505699	chr6_GL000254v2_alt:3496109-3505699	1	+	3496609	3504971	789624	9	300,191,154,96,108,84,85,55,872,	0,492,935,1597,1780,3546,3749,8479,8718,
#Deleted in new
chr6_GL000254v2_alt	3496152	3505699	chr6_GL000254v2_alt:3496152-3505699	1	+	3496609	3504971	789624	9	109,191,154,96,108,84,85,55,872,	0,449,892,1554,1737,3503,3706,8436,8675,
#Deleted in new
chr6_GL000254v2_alt	3496181	3499943	chr6_GL000254v2_alt:3496181-3499943	0	+	3496609	3499943	789624	6	238,191,16,108,84,85,	0,420,1605,1708,3474,3677,
#Deleted in new
chr6_GL000254v2_alt	3496211	3504617	chr6_GL000254v2_alt:3496211-3504617	0	+	3496211	3496211	8553170	7	208,191,154,16,108,84,29,	0,390,833,1575,1678,3444,8377,
#Deleted in new
chr6_GL000254v2_alt	3496236	3513999	chr6_GL000254v2_alt:3496236-3513999	0	+	3496609	3508220	0	21	183,191,154,96,108,84,85,55,79,95,123,110,96,155,80,154,627,209,98,1143,256,	0,365,808,1470,1653,3419,3622,8352,10363,11922,12282,12485,12694,12887,13134,13287,13694,15077,15692,16199,17507,
#Deleted in new
chr6_GL000254v2_alt	3496480	3499715	chr6_GL000254v2_alt:3496480-3499715	0	+	3496609	3499715	789624	5	312,154,96,108,60,	0,564,1226,1409,3175,
#Deleted in new
chr6_GL000254v2_alt	3496492	3497802	chr6_GL000254v2_alt:3496492-3497802	0	+	3496609	3497802	789624	2	300,96,	0,1214,
#Deleted in new
chr6_GL000254v2_alt	3497032	3497778	chr6_GL000254v2_alt:3497032-3497778	0	+	3497032	3497032	8553170	2	166,72,	0,674,
#Deleted in new
chr6_GL000254v2_alt	3499129	3506676	chr6_GL000254v2_alt:3499129-3506676	0	+	3499129	3499129	8553170	4	610,85,55,77,	0,729,5459,7470,
#Deleted in new
chr6_GL000254v2_alt	3499508	3500341	chr6_GL000254v2_alt:3499508-3500341	0	+	3499508	3499508	8553170	2	231,483,	0,350,
#Deleted in new
chr6_GL000254v2_alt	3499661	3509026	chr6_GL000254v2_alt:3499661-3509026	0	+	3499661	3508220	789624	7	78,85,55,103,483,110,96,	0,197,4927,6938,8497,9060,9269,
#Deleted in new
chr6_GL000254v2_alt	3506603	3510302	chr6_GL000254v2_alt:3506603-3510302	1	+	3508186	3509977	789624	9	75,129,123,110,96,171,80,154,372,	0,1555,1915,2118,2327,2504,2767,2920,3327,
#Deleted in new
chr6_GL000254v2_alt	3506625	3510302	chr6_GL000254v2_alt:3506625-3510302	1	+	3508186	3509977	789624	9	77,129,123,110,96,171,80,154,372,	0,1533,1893,2096,2305,2482,2745,2898,3305,
#Deleted in new
chr6_GL000254v2_alt	3506680	3509677	chr6_GL000254v2_alt:3506680-3509677	0	+	3508186	3509677	789624	8	22,129,123,110,96,111,80,154,	0,1478,1838,2041,2250,2487,2690,2843,
#Deleted in new
chr6_GL000254v2_alt	3507256	3510302	chr6_GL000254v2_alt:3507256-3510302	2	+	3507256	3507256	8553170	6	1385,110,96,171,307,372,	0,1465,1674,1851,2114,2674,
#Deleted in new
chr6_GL000254v2_alt	3508213	3509190	chr6_GL000254v2_alt:3508213-3509190	0	+	3508213	3508213	8553170	4	40,123,110,260,	0,305,508,717,
#Deleted in new
chr6_GL000254v2_alt	3509563	3510302	chr6_GL000254v2_alt:3509563-3510302	0	+	3509563	3509563	8553170	2	83,372,	0,367,
#Deleted in new
chr6_GL000254v2_alt	3510232	3519346	chr6_GL000254v2_alt:3510232-3519346	1	-	3511296	3513517	789624	7	1237,73,96,176,134,209,92,	0,1754,1953,2213,2725,3085,9022,
#Deleted in new
chr6_GL000254v2_alt	3510232	3519101	chr6_GL000254v2_alt:3510232-3519101	1	-	3511296	3513517	789624	7	1237,73,96,176,134,209,571,	0,1754,1953,2213,2725,3085,8298,
#Deleted in new
chr6_GL000254v2_alt	3510232	3515136	chr6_GL000254v2_alt:3510232-3515136	1	-	3511296	3513517	789624	7	1237,73,96,176,134,209,178,	0,1754,1953,2213,2725,3085,4726,
#Deleted in new
chr6_GL000254v2_alt	3510232	3519807	chr6_GL000254v2_alt:3510232-3519807	1	-	3511296	3513517	789624	7	1237,73,96,176,134,209,243,	0,1754,1953,2213,2725,3085,9332,
#Deleted in new
chr6_GL000254v2_alt	3510232	3520117	chr6_GL000254v2_alt:3510232-3520117	3	-	3511296	3513517	789624	7	1237,73,96,176,134,209,96,	0,1754,1953,2213,2725,3085,9789,
#Deleted in new
chr6_GL000254v2_alt	3510232	3518143	chr6_GL000254v2_alt:3510232-3518143	1	-	3511296	3513517	789624	7	1237,73,96,176,134,209,309,	0,1754,1953,2213,2725,3085,7602,
#Deleted in new
chr6_GL000254v2_alt	3510232	3519363	chr6_GL000254v2_alt:3510232-3519363	0	-	3510232	3510232	8553170	5	1237,73,96,209,833,	0,1754,1953,3085,8298,
#Deleted in new
chr6_GL000254v2_alt	3512185	3517918	chr6_GL000254v2_alt:3512185-3517918	0	-	3512185	3512185	8553170	5	96,176,134,256,84,	0,260,772,1085,5649,
#Deleted in new
chr6_GL000254v2_alt	3520374	3522812	chr6_GL000254v2_alt:3520374-3522812	3	+	3520532	3522345	789624	6	298,19,113,55,118,565,	0,1185,1295,1521,1653,1873,
#Deleted in new
chr6_GL000254v2_alt	3520457	3521792	chr6_GL000254v2_alt:3520457-3521792	0	+	3520457	3520457	8553170	3	215,19,123,	0,1102,1212,
#Deleted in new
chr6_GL000254v2_alt	3522986	3526343	chr6_GL000254v2_alt:3522986-3526343	3	-	3523161	3526241	0	11	272,127,27,142,131,183,88,65,196,107,154,	0,383,638,1279,1600,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000254v2_alt	3522986	3526256	chr6_GL000254v2_alt:3522986-3526256	1	-	3523192	3526241	789624	10	272,127,27,160,183,88,65,154,107,67,	0,383,638,1571,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000254v2_alt	3522986	3526265	chr6_GL000254v2_alt:3522986-3526265	1	-	3523571	3526241	789624	10	272,109,142,131,183,88,65,196,107,76,	0,556,1279,1600,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000254v2_alt	3522986	3526265	chr6_GL000254v2_alt:3522986-3526265	0	-	3522986	3522986	789624	10	272,127,27,142,131,183,88,65,196,366,	0,383,638,1279,1600,1873,2146,2356,2587,2913,
#Deleted in new
chr6_GL000254v2_alt	3522986	3524950	chr6_GL000254v2_alt:3522986-3524950	0	-	3522986	3522986	8553170	4	272,109,142,364,	0,556,1279,1600,
#Deleted in new
chr6_GL000254v2_alt	3522986	3523654	chr6_GL000254v2_alt:3522986-3523654	0	-	3522986	3522986	8553170	2	272,285,	0,383,
#Deleted in new
chr6_GL000254v2_alt	3522986	3524950	chr6_GL000254v2_alt:3522986-3524950	0	-	3522986	3522986	8553170	5	272,127,27,142,364,	0,383,638,1279,1600,
#Deleted in new
chr6_GL000254v2_alt	3522986	3526341	chr6_GL000254v2_alt:3522986-3526341	1	-	3523161	3525625	789624	10	272,127,142,131,183,88,65,196,107,152,	0,383,1279,1600,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000254v2_alt	3522986	3526341	chr6_GL000254v2_alt:3522986-3526341	1	-	3523161	3526241	789624	11	272,127,27,142,131,183,88,113,196,107,152,	0,383,638,1279,1600,1873,2146,2308,2587,2913,3203,
#Deleted in new
chr6_GL000254v2_alt	3522986	3526341	chr6_GL000254v2_alt:3522986-3526341	1	-	3523161	3526241	789624	5	272,83,123,107,152,	0,383,2660,2913,3203,
#Deleted in new
chr6_GL000254v2_alt	3522986	3526341	chr6_GL000254v2_alt:3522986-3526341	1	-	3523571	3526241	789624	10	272,109,142,131,183,88,113,196,107,152,	0,556,1279,1600,1873,2146,2308,2587,2913,3203,
#Deleted in new
chr6_GL000254v2_alt	3523161	3526241	chr6_GL000254v2_alt:3523161-3526241	1	-	3523161	3524595	789624	8	97,127,27,142,131,59,30,52,	0,208,463,1104,1425,1698,2815,3028,
#Deleted in new
chr6_GL000254v2_alt	3524886	3526254	chr6_GL000254v2_alt:3524886-3526254	0	-	3524886	3526241	789624	6	156,88,117,183,107,65,	0,246,456,700,1013,1303,
#Deleted in new
chr6_GL000254v2_alt	3524898	3526256	chr6_GL000254v2_alt:3524898-3526256	0	-	3524898	3526241	789624	6	144,88,113,196,107,67,	0,234,396,675,1001,1291,
#Deleted in new
chr6_GL000254v2_alt	3525427	3526341	chr6_GL000254v2_alt:3525427-3526341	1	-	3525427	3526241	789624	4	32,196,107,152,	0,146,472,762,
#Deleted in new
chr6_GL000254v2_alt	3526759	3532202	chr6_GL000254v2_alt:3526759-3532202	3	-	3528397	3531931	789624	9	1731,87,89,154,136,191,248,74,492,	0,1860,2069,2498,2903,3222,3513,3979,4951,
#Deleted in new
chr6_GL000254v2_alt	3528271	3529531	chr6_GL000254v2_alt:3528271-3529531	0	-	3528271	3528271	8553170	2	646,274,	0,986,
#Deleted in new
chr6_GL000254v2_alt	3528988	3531958	chr6_GL000254v2_alt:3528988-3531958	0	-	3528988	3528988	8553170	6	423,136,191,248,74,248,	0,674,993,1284,1750,2722,
#Deleted in new
chr6_GL000254v2_alt	3529248	3530832	chr6_GL000254v2_alt:3529248-3530832	0	-	3529248	3529248	8553170	4	163,136,191,560,	0,414,733,1024,
#Deleted in new
chr6_GL000254v2_alt	3530295	3531093	chr6_GL000254v2_alt:3530295-3531093	0	-	3530295	3530295	8553170	2	225,355,	0,443,
#Deleted in new
chr6_GL000254v2_alt	3532781	3534922	chr6_GL000254v2_alt:3532781-3534922	1	-	3533381	3534529	789624	4	738,200,103,435,	0,943,1382,1706,
#Deleted in new
chr6_GL000254v2_alt	3532781	3537539	chr6_GL000254v2_alt:3532781-3537539	1	-	3533381	3534529	789624	8	738,200,103,59,84,81,93,98,	0,943,1382,1706,2275,3544,3971,4660,
#Deleted in new
chr6_GL000254v2_alt	3532781	3534884	chr6_GL000254v2_alt:3532781-3534884	0	-	3532781	3532781	8553170	4	738,200,125,397,	0,943,1382,1706,
#Deleted in new
chr6_GL000254v2_alt	3532781	3534901	chr6_GL000254v2_alt:3532781-3534901	2	-	3533881	3534529	789624	4	738,162,103,414,	0,943,1382,1706,
#Deleted in new
chr6_GL000254v2_alt	3532782	3535134	chr6_GL000254v2_alt:3532782-3535134	1	-	3533789	3535134	789624	5	737,200,103,59,78,	0,942,1381,1705,2274,
#Deleted in new
chr6_GL000254v2_alt	3536858	3566106	chr6_GL000254v2_alt:3536858-3566106	3	-	3537452	3565967	789624	30	1308,98,148,296,139,82,220,176,384,524,113,253,185,154,88,118,153,146,160,123,114,114,195,156,237,123,348,296,82,212,	0,1481,2082,2456,3578,3806,4083,5998,6284,7243,8937,9304,15917,17636,17986,18297,18850,19272,20415,22128,22336,23178,24775,25312,25588,25939,26161,27691,28185,29036,
#Deleted in new
chr6_GL000254v2_alt	3536858	3546196	chr6_GL000254v2_alt:3536858-3546196	0	-	3536858	3536858	8553170	10	1308,98,148,296,139,82,220,176,2766,34,	0,1481,2082,2456,3578,3806,4083,5998,6284,9304,
#Deleted in new
chr6_GL000254v2_alt	3536858	3538993	chr6_GL000254v2_alt:3536858-3538993	0	-	3536858	3536858	8553170	2	1579,53,	0,2082,
#Deleted in new
chr6_GL000254v2_alt	3552949	3556258	chr6_GL000254v2_alt:3552949-3556258	0	-	3552949	3552949	8553170	5	11,154,118,153,128,	0,1545,2206,2759,3181,
#Deleted in new
chr6_GL000254v2_alt	3557902	3566096	chr6_GL000254v2_alt:3557902-3566096	0	-	3557902	3557902	8553170	11	1207,114,114,195,156,237,123,348,296,82,202,	0,1292,2134,3731,4268,4544,4895,5117,6647,7141,7992,
#Deleted in new
chr6_GL000254v2_alt	3658486	3713684	chr6_GL000254v2_alt:3658486-3713684	0	-	3658486	3713483	789624	22	21,21,21,24,24,21,21,21,21,21,21,39,21,21,21,21,21,30,33,33,87,214,	0,6091,6728,7200,8269,14205,15654,19056,19531,20234,22597,23219,26859,33011,38387,38912,49436,49542,51205,52060,53178,54984,
#Deleted in new
chr6_GL000254v2_alt	3664577	3713656	chr6_GL000254v2_alt:3664577-3713656	3	-	3664577	3713483	789624	19	21,21,24,21,21,21,21,21,21,39,90,21,21,21,30,33,33,87,186,	0,637,1109,8114,9563,12965,13440,14143,16506,17128,26920,32296,32821,43345,43451,45114,45969,47087,48893,
#Deleted in new
chr6_GL000254v2_alt	3667317	3668277	chr6_GL000254v2_alt:3667317-3668277	7	+	3667317	3667317	16724991	1	960,	0,
#Deleted in new
chr6_GL000254v2_alt	3694630	3694737	chr6_GL000254v2_alt:3694630-3694737	3	+	3694630	3694630	8553170	1	107,	0,
#Deleted in new
chr6_GL000254v2_alt	3732258	3735436	chr6_GL000254v2_alt:3732258-3735436	3	+	3732258	3732258	789624	3	245,128,238,	0,1104,2940,
#Deleted in new
chr6_GL000254v2_alt	3735712	3748885	chr6_GL000254v2_alt:3735712-3748885	3	-	3735718	3748878	789624	7	95,282,348,21,282,348,86,	0,781,2076,7826,8976,10980,13087,
#Deleted in new
chr6_GL000254v2_alt	3736485	3748878	chr6_GL000254v2_alt:3736485-3748878	0	-	3743543	3748878	789624	5	290,344,21,112,79,	0,1307,7053,10443,12314,
#Deleted in new
chr6_GL000254v2_alt	3736485	3748878	chr6_GL000254v2_alt:3736485-3748878	1	-	3736485	3738035	789624	5	290,348,21,107,79,	0,1303,7053,10448,12314,
#Deleted in new
chr6_GL000254v2_alt	3736485	3748878	chr6_GL000254v2_alt:3736485-3748878	1	-	3736485	3748878	789624	6	290,348,21,282,348,79,	0,1303,7053,8203,10207,12314,
#Deleted in new
chr6_GL000254v2_alt	3746790	3748885	chr6_GL000254v2_alt:3746790-3748885	0	-	3746790	3748878	789624	2	247,86,	0,2009,
#Deleted in new
chr6_GL000254v2_alt	3780807	3786018	chr6_GL000254v2_alt:3780807-3786018	3	+	3780916	3784874	0	5	191,246,282,166,395,	0,2604,3341,3912,4816,
#Deleted in new
chr6_GL000254v2_alt	3780837	3784161	chr6_GL000254v2_alt:3780837-3784161	0	+	3780837	3780837	8553170	3	161,117,13,	0,2703,3311,
#Deleted in new
chr6_GL000254v2_alt	3780889	3786018	chr6_GL000254v2_alt:3780889-3786018	1	+	3780916	3784874	789624	5	109,246,207,166,395,	0,2522,3334,3830,4734,
#Deleted in new
chr6_GL000254v2_alt	3800704	3814360	chr6_GL000254v2_alt:3800704-3814360	7	-	3800704	3800704	16724991	2	267,76,	0,13580,
#Deleted in new
chr6_GL000254v2_alt	3826597	3826693	chr6_GL000254v2_alt:3826597-3826693	7	-	3826597	3826597	16724991	1	96,	0,
#Deleted in new
chr6_GL000254v2_alt	3852163	3852311	chr6_GL000254v2_alt:3852163-3852311	3	-	3852163	3852163	8553170	1	148,	0,
#Deleted in new
chr6_GL000254v2_alt	3857590	3857686	chr6_GL000254v2_alt:3857590-3857686	7	-	3857590	3857590	16724991	1	96,	0,
#Deleted in new
chr6_GL000254v2_alt	3873957	3874109	chr6_GL000254v2_alt:3873957-3874109	3	-	3873957	3873957	8553170	1	152,	0,
#Deleted in new
chr6_GL000254v2_alt	3876735	3891699	chr6_GL000254v2_alt:3876735-3891699	3	-	3877055	3891636	789624	6	334,24,111,282,270,163,	0,636,1134,1949,4968,14801,
#Deleted in new
chr6_GL000254v2_alt	3929250	3938593	chr6_GL000254v2_alt:3929250-3938593	0	+	3938520	3938593	789624	4	92,151,166,111,	0,3747,4548,9232,
#Deleted in new
chr6_GL000254v2_alt	3938418	3944663	chr6_GL000254v2_alt:3938418-3944663	1	+	3938520	3943777	789624	5	184,249,282,175,495,	0,3881,4575,5204,5750,
#Deleted in new
chr6_GL000254v2_alt	3938462	3944663	chr6_GL000254v2_alt:3938462-3944663	1	+	3938520	3943777	789624	5	140,249,282,175,360,	0,3837,4531,5160,5841,
#Deleted in new
chr6_GL000254v2_alt	3938467	3944663	chr6_GL000254v2_alt:3938467-3944663	3	+	3938520	3943777	789624	5	135,249,282,175,707,	0,3832,4526,5155,5489,
#Deleted in new
chr6_GL000254v2_alt	3938467	3943986	chr6_GL000254v2_alt:3938467-3943986	0	+	3938467	3938467	8553170	4	135,249,282,30,	0,3832,4526,5489,
#Deleted in new
chr6_GL000254v2_alt	3938485	3943262	chr6_GL000254v2_alt:3938485-3943262	0	+	3938485	3938485	8553170	3	117,249,370,	0,3814,4407,
#Deleted in new
chr6_GL000254v2_alt	3938487	3943977	chr6_GL000254v2_alt:3938487-3943977	1	+	3938520	3943777	789624	4	115,249,282,355,	0,3812,4506,5135,
#Deleted in new
chr6_GL000254v2_alt	3938488	3944283	chr6_GL000254v2_alt:3938488-3944283	0	+	3938520	3939994	789624	6	114,957,249,282,175,327,	0,1462,3811,4505,5134,5468,
#Deleted in new
chr6_GL000254v2_alt	3938492	3949996	chr6_GL000254v2_alt:3938492-3949996	0	+	3938492	3938492	8553170	3	110,249,7003,	0,3807,4501,
#Deleted in new
chr6_GL000254v2_alt	3942299	3944283	chr6_GL000254v2_alt:3942299-3944283	0	+	3942299	3942299	8553170	3	249,282,115,	0,694,1869,
#Deleted in new
chr6_GL000254v2_alt	3955833	3963311	chr6_GL000254v2_alt:3955833-3963311	1	-	3956602	3963102	789624	6	783,24,111,282,270,318,	0,1394,1903,2531,5442,7160,
#Deleted in new
chr6_GL000254v2_alt	3955833	3963189	chr6_GL000254v2_alt:3955833-3963189	1	-	3956602	3963102	0	5	783,111,282,270,196,	0,1903,2531,5442,7160,
#Deleted in new
chr6_GL000254v2_alt	3955833	3964882	chr6_GL000254v2_alt:3955833-3964882	3	-	3956602	3963102	0	6	783,111,282,270,172,116,	0,1903,2531,5442,7160,8933,
#Deleted in new
chr6_GL000254v2_alt	3955833	3963143	chr6_GL000254v2_alt:3955833-3963143	1	-	3956602	3963102	789624	4	783,282,270,150,	0,2531,5442,7160,
#Deleted in new
chr6_GL000254v2_alt	3955833	3963147	chr6_GL000254v2_alt:3955833-3963147	1	-	3956602	3963102	789624	3	783,282,154,	0,2531,7160,
#Deleted in new
chr6_GL000254v2_alt	3955833	3963133	chr6_GL000254v2_alt:3955833-3963133	0	-	3955833	3955833	8553170	3	783,3809,140,	0,1903,7160,
#Deleted in new
chr6_GL000254v2_alt	3955833	3963133	chr6_GL000254v2_alt:3955833-3963133	0	-	3958451	3963102	789624	5	783,111,119,270,140,	0,1903,2531,5442,7160,
#Deleted in new
chr6_GL000254v2_alt	3956246	3957097	chr6_GL000254v2_alt:3956246-3957097	3	+	3956246	3956246	789624	2	177,376,	0,475,
#Deleted in new
chr6_GL000254v2_alt	3956252	3958848	chr6_GL000254v2_alt:3956252-3958848	3	-	3956252	3956252	8553170	2	212,97,	0,2499,
#Deleted in new
chr6_GL000254v2_alt	3956252	3956807	chr6_GL000254v2_alt:3956252-3956807	0	-	3956252	3956252	8553170	2	364,64,	0,491,
#Deleted in new
chr6_GL000254v2_alt	3958399	3963152	chr6_GL000254v2_alt:3958399-3963152	0	-	3958399	3963102	789624	3	247,136,101,	0,2876,4652,
#Deleted in new
chr6_GL000254v2_alt	4005361	4006194	chr6_GL000254v2_alt:4005361-4006194	7	-	4005361	4005361	16724991	1	833,	0,
#Deleted in new
chr6_GL000254v2_alt	4016738	4017565	chr6_GL000254v2_alt:4016738-4017565	0	+	4016738	4016738	8553170	2	143,242,	0,585,
#Deleted in new
chr6_GL000254v2_alt	4016763	4017570	chr6_GL000254v2_alt:4016763-4017570	3	+	4016763	4016763	8553170	3	118,35,247,	0,376,560,
#Deleted in new
chr6_GL000254v2_alt	4017118	4017573	chr6_GL000254v2_alt:4017118-4017573	0	+	4017118	4017118	8553170	2	56,250,	0,205,
#Deleted in new
chr6_GL000254v2_alt	4030136	4031073	chr6_GL000254v2_alt:4030136-4031073	7	-	4030136	4030136	16724991	2	80,276,	0,661,
#Deleted in new
chr6_GL000254v2_alt	4040715	4046584	chr6_GL000254v2_alt:4040715-4046584	3	+	4040817	4045770	789624	5	184,249,282,174,628,	0,3819,4451,4900,5241,
#Deleted in new
chr6_GL000254v2_alt	4040817	4045770	chr6_GL000254v2_alt:4040817-4045770	1	+	4040817	4045770	789624	4	82,249,282,155,	0,3717,4349,4798,
#Deleted in new
chr6_GL000254v2_alt	4055472	4062868	chr6_GL000254v2_alt:4055472-4062868	1	-	4055827	4062860	789624	5	369,24,282,267,117,	0,1185,2756,5565,7279,
#Deleted in new
chr6_GL000254v2_alt	4055472	4062912	chr6_GL000254v2_alt:4055472-4062912	3	-	4055827	4062860	789624	6	369,24,111,282,267,161,	0,1185,1678,2756,5565,7279,
#Deleted in new
chr6_GL000254v2_alt	4055473	4062910	chr6_GL000254v2_alt:4055473-4062910	1	-	4056610	4062860	789624	5	1208,111,282,267,159,	0,1677,2755,5564,7278,
#Deleted in new
chr6_GL000254v2_alt	4055762	4062844	chr6_GL000254v2_alt:4055762-4062844	0	-	4055827	4062844	789624	4	79,282,267,93,	0,2466,5275,6989,
#Deleted in new
chr6_GL000254v2_alt	4111855	4116141	chr6_GL000254v2_alt:4111855-4116141	3	-	4112308	4116044	0	6	489,32,111,282,270,188,	0,677,960,1557,2281,4098,
#Deleted in new
chr6_GL000254v2_alt	4111855	4116069	chr6_GL000254v2_alt:4111855-4116069	0	-	4114268	4116044	789624	6	489,32,111,282,158,116,	0,677,960,1557,2281,4098,
#Deleted in new
chr6_GL000254v2_alt	4112139	4116081	chr6_GL000254v2_alt:4112139-4116081	0	-	4112139	4112139	8553170	5	205,32,879,270,128,	0,393,676,1997,3814,
#Deleted in new
chr6_GL000254v2_alt	4113462	4116003	chr6_GL000254v2_alt:4113462-4116003	0	-	4113462	4116003	789624	3	223,270,50,	0,674,2491,
#Deleted in new
chr6_GL000254v2_alt	4120920	4137794	chr6_GL000254v2_alt:4120920-4137794	3	-	4121376	4137303	789624	12	486,137,160,174,189,129,198,206,131,115,497,75,	0,7559,8089,8426,8777,10492,10786,13303,13792,15686,15890,16799,
#Deleted in new
chr6_GL000254v2_alt	4124489	4137837	chr6_GL000254v2_alt:4124489-4137837	1	-	4127934	4137303	789624	13	3496,126,137,160,174,189,129,198,206,131,115,497,118,	0,3499,3990,4520,4857,5208,6923,7217,9734,10223,12117,12321,13230,
#Deleted in new
chr6_GL000254v2_alt	4124494	4137847	chr6_GL000254v2_alt:4124494-4137847	1	-	4127985	4137303	0	12	3620,137,160,174,189,129,198,206,131,115,497,128,	0,3985,4515,4852,5203,6918,7212,9729,10218,12112,12316,13225,
#Deleted in new
chr6_GL000254v2_alt	4128023	4129807	chr6_GL000254v2_alt:4128023-4129807	0	-	4128023	4128023	8553170	4	91,137,160,461,	0,456,986,1323,
#Deleted in new
chr6_GL000254v2_alt	4131374	4131813	chr6_GL000254v2_alt:4131374-4131813	0	-	4131374	4131374	8553170	2	167,107,	0,332,
#Deleted in new
chr6_GL000254v2_alt	4139785	4143772	chr6_GL000254v2_alt:4139785-4143772	3	-	4140027	4143482	0	6	331,205,130,112,148,425,	0,814,1417,1955,2225,3562,
#Deleted in new
chr6_GL000254v2_alt	4139785	4143089	chr6_GL000254v2_alt:4139785-4143089	1	-	4140027	4143065	789624	6	331,205,130,40,148,171,	0,814,1417,1955,2225,3133,
#Deleted in new
chr6_GL000254v2_alt	4139785	4143116	chr6_GL000254v2_alt:4139785-4143116	1	-	4140027	4143065	0	6	331,205,130,112,148,198,	0,814,1417,1955,2225,3133,
#Deleted in new
chr6_GL000254v2_alt	4139785	4141103	chr6_GL000254v2_alt:4139785-4141103	0	-	4139785	4139785	8553170	2	331,504,	0,814,
#Deleted in new
chr6_GL000254v2_alt	4140089	4143720	chr6_GL000254v2_alt:4140089-4143720	0	-	4140089	4140089	8553170	5	27,205,130,418,373,	0,510,1113,1651,3258,
#Deleted in new
chr6_GL000254v2_alt	4143154	4145564	chr6_GL000254v2_alt:4143154-4145564	3	+	4143154	4143154	789624	2	189,1078,	0,1332,
#Deleted in new
chr6_GL000254v2_alt	4143176	4144888	chr6_GL000254v2_alt:4143176-4144888	0	+	4143176	4143176	8553170	3	167,301,490,	0,462,1222,
#Deleted in new
chr6_GL000254v2_alt	4143201	4145279	chr6_GL000254v2_alt:4143201-4145279	0	+	4143201	4143201	789624	3	142,61,793,	0,677,1285,
#Deleted in new
chr6_GL000254v2_alt	4143201	4145055	chr6_GL000254v2_alt:4143201-4145055	0	+	4143201	4143201	789624	3	142,226,569,	0,512,1285,
#Deleted in new
chr6_GL000254v2_alt	4143202	4144764	chr6_GL000254v2_alt:4143202-4144764	0	+	4143202	4143202	8553170	2	737,278,	0,1284,
#Deleted in new
chr6_GL000254v2_alt	4143204	4158654	chr6_GL000254v2_alt:4143204-4158654	1	+	4155215	4158601	789624	6	139,68,132,130,142,181,	0,12002,13127,13869,14228,15269,
#Deleted in new
chr6_GL000254v2_alt	4143206	4145147	chr6_GL000254v2_alt:4143206-4145147	0	+	4143206	4143206	8553170	2	137,749,	0,1192,
#Deleted in new
chr6_GL000254v2_alt	4143904	4157506	chr6_GL000254v2_alt:4143904-4157506	0	+	4155215	4157506	789624	5	35,68,132,130,74,	0,11302,12427,13169,13528,
#Deleted in new
chr6_GL000254v2_alt	4144277	4153047	chr6_GL000254v2_alt:4144277-4153047	3	-	4144647	4152885	0	11	577,137,163,174,189,129,198,206,131,115,940,	0,1859,2304,2710,3443,3781,5109,5733,6900,7179,7830,
#Deleted in new
chr6_GL000254v2_alt	4144277	4149209	chr6_GL000254v2_alt:4144277-4149209	0	-	4144277	4144277	8553170	5	577,137,163,174,1489,	0,1859,2304,2710,3443,
#Deleted in new
chr6_GL000254v2_alt	4144743	4147299	chr6_GL000254v2_alt:4144743-4147299	0	-	4144743	4144743	8553170	3	111,608,312,	0,1393,2244,
#Deleted in new
chr6_GL000254v2_alt	4153216	4157969	chr6_GL000254v2_alt:4153216-4157969	0	+	4153216	4153216	8553170	3	142,1997,537,	0,1990,4216,
#Deleted in new
chr6_GL000254v2_alt	4153229	4158654	chr6_GL000254v2_alt:4153229-4158654	1	+	4153298	4158601	0	6	129,68,132,130,142,181,	0,1977,3102,3844,4203,5244,
#Deleted in new
chr6_GL000254v2_alt	4153274	4178620	chr6_GL000254v2_alt:4153274-4178620	3	+	4153298	4178520	789624	6	84,68,130,142,93,144,	0,1932,3799,4158,22840,25202,
#Deleted in new
chr6_GL000254v2_alt	4155165	4157791	chr6_GL000254v2_alt:4155165-4157791	0	+	4155165	4155165	8553170	4	109,132,130,359,	0,1166,1908,2267,
#Deleted in new
chr6_GL000254v2_alt	4178204	4178881	chr6_GL000254v2_alt:4178204-4178881	7	-	4178204	4178204	16724991	1	677,	0,
#Deleted in new
chr6_GL000254v2_alt	4178249	4178866	chr6_GL000254v2_alt:4178249-4178866	5	-	4178249	4178249	16724991	1	617,	0,
#Deleted in new
chr6_GL000254v2_alt	4195441	4195516	chr6_GL000254v2_alt:4195441-4195516	7	+	4195441	4195441	16724991	1	75,	0,
#Deleted in new
chr6_GL000254v2_alt	4233671	4236482	chr6_GL000254v2_alt:4233671-4236482	0	-	4234013	4236482	789624	3	359,36,268,	0,713,2543,
#Deleted in new
chr6_GL000254v2_alt	4233671	4237731	chr6_GL000254v2_alt:4233671-4237731	0	-	4234013	4237731	789624	4	359,117,285,5,	0,907,2543,4055,
#Deleted in new
chr6_GL000254v2_alt	4233671	4240113	chr6_GL000254v2_alt:4233671-4240113	1	-	4234013	4239850	0	6	359,36,117,285,282,318,	0,713,907,2543,4055,6124,
#Deleted in new
chr6_GL000254v2_alt	4233671	4240064	chr6_GL000254v2_alt:4233671-4240064	1	-	4234030	4239850	789624	5	390,121,285,282,269,	0,903,2543,4055,6124,
#Deleted in new
chr6_GL000254v2_alt	4233671	4235929	chr6_GL000254v2_alt:4233671-4235929	0	-	4233671	4233671	8553170	3	359,36,1351,	0,713,907,
#Deleted in new
chr6_GL000254v2_alt	4233671	4240027	chr6_GL000254v2_alt:4233671-4240027	0	-	4233671	4233671	8553170	2	4337,232,	0,6124,
#Deleted in new
chr6_GL000254v2_alt	4233671	4235944	chr6_GL000254v2_alt:4233671-4235944	0	-	4233671	4233671	8553170	2	359,1560,	0,713,
#Deleted in new
chr6_GL000254v2_alt	4236406	4252170	chr6_GL000254v2_alt:4236406-4252170	2	-	4236406	4252084	789624	4	93,282,63,174,	0,1320,3389,15590,
#Deleted in new
chr6_GL000254v2_alt	4247657	4252156	chr6_GL000254v2_alt:4247657-4252156	1	-	4247911	4252084	789624	5	259,129,177,285,160,	0,661,1001,1909,4339,
#Deleted in new
chr6_GL000254v2_alt	4247657	4252170	chr6_GL000254v2_alt:4247657-4252170	1	-	4247911	4252084	0	5	259,129,279,285,174,	0,661,1001,1909,4339,
#Deleted in new
chr6_GL000254v2_alt	4247657	4252109	chr6_GL000254v2_alt:4247657-4252109	1	-	4247911	4252084	789624	4	259,129,279,113,	0,661,1001,4339,
#Deleted in new
chr6_GL000254v2_alt	4247657	4252156	chr6_GL000254v2_alt:4247657-4252156	0	-	4247657	4247657	8553170	4	259,126,1193,160,	0,664,1001,4339,
#Deleted in new
chr6_GL000254v2_alt	4247657	4248719	chr6_GL000254v2_alt:4247657-4248719	0	-	4247657	4247657	8553170	2	259,401,	0,661,
#Deleted in new
chr6_GL000254v2_alt	4247785	4269773	chr6_GL000254v2_alt:4247785-4269773	2	-	4247785	4247785	8553170	5	131,129,15,285,138,	0,533,873,1781,21850,
#Deleted in new
chr6_GL000254v2_alt	4247818	4267501	chr6_GL000254v2_alt:4247818-4267501	0	-	4247818	4247818	8553170	4	98,129,279,300,	0,500,840,19383,
#Deleted in new
chr6_GL000254v2_alt	4248318	4251509	chr6_GL000254v2_alt:4248318-4251509	0	-	4248318	4251509	789624	4	129,279,285,178,	0,340,1248,3013,
#Deleted in new
chr6_GL000254v2_alt	4248704	4268151	chr6_GL000254v2_alt:4248704-4268151	0	-	4248704	4249840	789624	3	233,285,93,	0,862,19354,
#Deleted in new
chr6_GL000254v2_alt	4249131	4252082	chr6_GL000254v2_alt:4249131-4252082	0	-	4249131	4249131	8553170	3	720,178,86,	0,2200,2865,
#Deleted in new
chr6_GL000254v2_alt	4267716	4277447	chr6_GL000254v2_alt:4267716-4277447	0	+	4271955	4277447	789624	10	397,1333,304,138,139,215,375,129,249,263,	0,2935,5802,6726,7373,7592,7904,8784,9099,9468,
#Deleted in new
chr6_GL000254v2_alt	4268314	4271198	chr6_GL000254v2_alt:4268314-4271198	0	+	4268314	4268314	8553170	2	95,547,	0,2337,
#Deleted in new
chr6_GL000254v2_alt	4268375	4275677	chr6_GL000254v2_alt:4268375-4275677	0	+	4268375	4275677	789624	6	34,304,138,139,215,57,	0,5143,6067,6714,6933,7245,
#Deleted in new
chr6_GL000254v2_alt	4269359	4269874	chr6_GL000254v2_alt:4269359-4269874	3	+	4269359	4269359	8553170	2	131,67,	0,448,
#Deleted in new
chr6_GL000254v2_alt	4269944	4277447	chr6_GL000254v2_alt:4269944-4277447	0	+	4271955	4277447	789624	10	310,1333,304,138,139,215,375,129,249,263,	0,707,3574,4498,5145,5364,5676,6556,6871,7240,
#Deleted in new
chr6_GL000254v2_alt	4269986	4277256	chr6_GL000254v2_alt:4269986-4277256	0	+	4269986	4269986	8553170	10	268,1333,304,138,139,215,375,311,249,72,	0,665,3532,4456,5103,5322,5634,6332,6829,7198,
#Deleted in new
chr6_GL000254v2_alt	4270009	4277447	chr6_GL000254v2_alt:4270009-4277447	0	+	4271955	4274461	789624	11	245,1333,304,92,138,139,215,375,129,249,263,	0,642,3509,4068,4433,5080,5299,5611,6491,6806,7175,
#Deleted in new
chr6_GL000254v2_alt	4271786	4278255	chr6_GL000254v2_alt:4271786-4278255	3	+	4271955	4278255	789624	10	198,304,138,139,215,375,129,249,263,105,	0,1732,2656,3303,3522,3834,4714,5029,5398,6364,
#Deleted in new
chr6_GL000254v2_alt	4272140	4277447	chr6_GL000254v2_alt:4272140-4277447	0	+	4272140	4277447	789624	9	46,304,138,139,215,375,129,249,263,	0,1378,2302,2949,3168,3480,4360,4675,5044,
#Deleted in new
chr6_GL000254v2_alt	4275200	4277273	chr6_GL000254v2_alt:4275200-4277273	0	+	4275200	4275200	8553170	5	28,215,1009,249,89,	0,108,420,1615,1984,
#Deleted in new
chr6_GL000254v2_alt	4275627	4276960	chr6_GL000254v2_alt:4275627-4276960	0	+	4275627	4275627	8553170	3	368,154,145,	0,848,1188,
#Deleted in new
chr6_GL000254v2_alt	4276608	4277860	chr6_GL000254v2_alt:4276608-4277860	0	+	4276608	4276608	8553170	3	21,249,676,	0,207,576,
#Deleted in new
chr6_GL000254v2_alt	4303232	4308667	chr6_GL000254v2_alt:4303232-4308667	1	-	4305892	4308591	0	5	2664,136,282,249,158,	0,2902,3133,3835,5277,
#Deleted in new
chr6_GL000254v2_alt	4305661	4306439	chr6_GL000254v2_alt:4305661-4306439	0	-	4305661	4305661	8553170	3	235,136,31,	0,473,747,
#Deleted in new
chr6_GL000254v2_alt	4305855	4307109	chr6_GL000254v2_alt:4305855-4307109	0	-	4305855	4305855	8553170	3	41,513,42,	0,279,1212,
#Deleted in new
chr6_GL000254v2_alt	4306499	4307179	chr6_GL000254v2_alt:4306499-4307179	0	-	4306499	4306499	8553170	2	433,112,	0,568,
#Deleted in new
chr6_GL000254v2_alt	4306551	4308634	chr6_GL000254v2_alt:4306551-4308634	2	-	4306551	4308591	789624	3	96,82,125,	0,516,1958,
#Deleted in new
chr6_GL000254v2_alt	4307115	4308637	chr6_GL000254v2_alt:4307115-4308637	0	-	4307115	4307115	8553170	2	344,128,	0,1394,
#Deleted in new
chr6_GL000254v2_alt	4363633	4379763	chr6_GL000254v2_alt:4363633-4379763	3	-	4367714	4372617	0	6	779,167,282,246,199,31,	0,4069,4450,5072,8884,16099,
#Deleted in new
chr6_GL000254v2_alt	4364071	4372662	chr6_GL000254v2_alt:4364071-4372662	0	-	4364071	4364071	8553170	2	4880,145,	0,8446,
#Deleted in new
chr6_GL000254v2_alt	4366724	4368313	chr6_GL000254v2_alt:4366724-4368313	0	-	4367714	4368313	789624	2	1145,230,	0,1359,
#Deleted in new
chr6_GL000254v2_alt	4367762	4372684	chr6_GL000254v2_alt:4367762-4372684	0	-	4367762	4372617	789624	4	107,271,158,167,	0,321,1031,4755,
#Deleted in new
chr6_GL000254v2_alt	4368083	4379820	chr6_GL000254v2_alt:4368083-4379820	0	-	4368083	4372617	789624	4	282,246,302,88,	0,622,4434,11649,
#Deleted in new
chr6_GL000254v2_alt	4368168	4379808	chr6_GL000254v2_alt:4368168-4379808	0	-	4368168	4368168	8553170	3	197,246,76,	0,537,11564,
#Deleted in new
chr6_GL000254v2_alt	4368226	4372680	chr6_GL000254v2_alt:4368226-4372680	0	-	4368226	4368226	8553170	3	139,246,195,	0,479,4259,
#Deleted in new
chr6_GL000254v2_alt	4372548	4379828	chr6_GL000254v2_alt:4372548-4379828	0	-	4372548	4372617	789624	2	209,96,	0,7184,
#Deleted in new
chr6_GL000254v2_alt	4374972	4386238	chr6_GL000254v2_alt:4374972-4386238	3	+	4375088	4385275	0	6	216,264,282,111,24,663,	0,4752,9014,9843,10283,10603,
#Deleted in new
chr6_GL000254v2_alt	4375018	4386238	chr6_GL000254v2_alt:4375018-4386238	1	+	4375088	4385275	789624	6	170,264,192,111,24,663,	0,4706,9058,9797,10237,10557,
#Deleted in new
chr6_GL000254v2_alt	4375056	4380285	chr6_GL000254v2_alt:4375056-4380285	0	+	4375056	4375056	8553170	2	132,561,	0,4668,
#Deleted in new
chr6_GL000254v2_alt	4378503	4378913	chr6_GL000254v2_alt:4378503-4378913	7	+	4378503	4378503	16724991	1	410,	0,
#Deleted in new
chr6_GL000254v2_alt	4379438	4383065	chr6_GL000254v2_alt:4379438-4383065	0	+	4379438	4379438	8553170	3	149,264,499,	0,286,3128,
#Deleted in new
chr6_GL000254v2_alt	4379438	4383994	chr6_GL000254v2_alt:4379438-4383994	0	+	4379438	4379438	8553170	3	149,264,8,	0,286,4548,
#Deleted in new
chr6_GL000254v2_alt	4379495	4384268	chr6_GL000254v2_alt:4379495-4384268	0	+	4379495	4379495	8553170	2	493,282,	0,4491,
#Deleted in new
chr6_GL000254v2_alt	4379539	4384926	chr6_GL000254v2_alt:4379539-4384926	0	+	4379539	4384926	789624	4	48,247,282,111,	0,202,4447,5276,
#Deleted in new
chr6_GL000254v2_alt	4379724	4386238	chr6_GL000254v2_alt:4379724-4386238	0	+	4379724	4385584	789624	5	264,282,128,24,663,	0,4262,5091,5531,5851,
#Deleted in new
chr6_GL000254v2_alt	4379993	4382943	chr6_GL000254v2_alt:4379993-4382943	0	+	4379993	4379993	8553170	3	291,132,377,	0,1066,2573,
#Deleted in new
chr6_GL000254v2_alt	4390789	4396332	chr6_GL000254v2_alt:4390789-4396332	7	-	4390789	4390789	16724991	4	151,282,245,55,	0,366,1140,5488,
#Deleted in new
chr6_GL000254v2_alt	4402803	4406340	chr6_GL000254v2_alt:4402803-4406340	7	-	4402803	4402803	16724991	6	39,60,167,211,136,63,	0,144,2173,2786,3112,3474,
#Deleted in new
chr6_GL000254v2_alt	4411460	4416229	chr6_GL000254v2_alt:4411460-4416229	7	+	4411460	4411460	16724991	2	165,264,	0,4505,
#Deleted in new
chr6_GL000254v2_alt	4411525	4416229	chr6_GL000254v2_alt:4411525-4416229	5	+	4411525	4411525	16724991	2	100,264,	0,4440,
#Deleted in new
chr6_GL000254v2_alt	4598638	4628455	chr6_GL000254v2_alt:4598638-4628455	3	-	4599635	4628196	789624	64	1138,207,113,268,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,87,75,63,42,60,63,192,163,211,150,341,	0,1586,2171,2868,3250,3490,3832,4039,4389,4583,4745,5118,5838,6025,6274,6702,7150,7366,7645,7876,8129,8432,8589,8785,9031,9368,9607,9848,10378,10666,10820,11019,11191,11329,11483,11845,12892,13334,13577,13751,14039,14310,14499,14730,14980,15450,15626,15753,15997,16238,16391,16549,16749,17037,17576,17986,18282,18429,22309,23944,25679,26295,26637,29476,
#Deleted in new
chr6_GL000254v2_alt	4598649	4628424	chr6_GL000254v2_alt:4598649-4628424	1	-	4599635	4628196	789624	66	1127,207,113,268,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,87,75,63,42,60,180,63,78,192,163,211,150,310,	0,1575,2160,2857,3239,3479,3821,4028,4378,4572,4734,5107,5827,6014,6263,6691,7139,7355,7634,7865,8118,8421,8578,8774,9020,9357,9596,9837,10367,10655,10809,11008,11180,11318,11472,11834,12881,13323,13566,13740,14028,14299,14488,14719,14969,15439,15615,15742,15986,16227,16380,16538,16738,17026,17565,17975,18271,18418,21451,22298,23007,23933,25668,26284,26626,29465,
#Deleted in new
chr6_GL000254v2_alt	4598649	4628424	chr6_GL000254v2_alt:4598649-4628424	1	-	4599635	4628196	789624	63	1127,207,113,268,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,87,75,63,42,60,192,163,211,150,310,	0,1575,2160,2857,3239,3479,3821,4028,4378,4572,4734,5107,5827,6014,6263,6691,7139,7355,7634,7865,8118,8421,8578,8774,9020,9357,9596,9837,10367,10655,10809,11008,11180,11318,11472,11834,12881,13323,13566,13740,14028,14299,14488,14719,14969,15439,15615,15742,15986,16227,16380,16538,16738,17026,17565,17975,18271,18418,23933,25668,26284,26626,29465,
#Deleted in new
chr6_GL000254v2_alt	4598652	4613850	chr6_GL000254v2_alt:4598652-4613850	0	-	4598652	4598652	8553170	9	1124,207,113,268,37,45,54,45,91,	0,1572,2157,2854,14313,14485,14716,14966,15107,
#Deleted in new
chr6_GL000254v2_alt	4614088	4628423	chr6_GL000254v2_alt:4614088-4628423	0	-	4614088	4628196	789624	21	54,45,54,54,54,54,54,57,87,75,63,42,60,180,63,78,192,163,211,150,309,	0,176,303,547,788,941,1099,1299,1587,2126,2536,2832,2979,6012,6859,7568,8494,10229,10845,11187,14026,
#Deleted in new
chr6_GL000254v2_alt	4622400	4628410	chr6_GL000254v2_alt:4622400-4628410	1	-	4622507	4628196	789624	5	374,163,211,150,296,	0,1917,2533,2875,5714,
#Deleted in new
chr6_GL000254v2_alt	4629543	4636641	chr6_GL000254v2_alt:4629543-4636641	3	-	4630637	4636429	0	10	1242,106,92,133,130,173,180,157,248,447,	0,1357,1775,1982,2317,2844,4172,4718,5578,6651,
#Deleted in new
chr6_GL000254v2_alt	4629543	4636567	chr6_GL000254v2_alt:4629543-4636567	1	-	4630637	4636429	0	10	1242,106,104,133,130,173,180,157,248,373,	0,1357,1775,1982,2317,2844,4172,4718,5578,6651,
#Deleted in new
chr6_GL000254v2_alt	4630175	4636590	chr6_GL000254v2_alt:4630175-4636590	0	-	4634413	4636429	789624	9	610,106,92,133,130,173,180,157,396,	0,725,1143,1350,1685,2212,3540,4086,6019,
#Deleted in new
chr6_GL000254v2_alt	4630619	4631316	chr6_GL000254v2_alt:4630619-4631316	0	-	4630619	4630619	8553170	2	166,416,	0,281,
#Deleted in new
chr6_GL000254v2_alt	4631004	4632392	chr6_GL000254v2_alt:4631004-4632392	0	-	4631318	4632392	789624	5	2,92,58,130,5,	0,314,521,856,1383,
#Deleted in new
chr6_GL000254v2_alt	4631740	4634589	chr6_GL000254v2_alt:4631740-4634589	0	-	4631740	4631740	8553170	3	820,180,328,	0,1975,2521,
#Deleted in new
chr6_GL000254v2_alt	4635553	4635649	chr6_GL000254v2_alt:4635553-4635649	3	+	4635553	4635553	8553170	1	96,	0,
#Deleted in new
chr6_GL000254v2_alt	4636397	4638645	chr6_GL000254v2_alt:4636397-4638645	0	+	4636750	4638645	789624	5	494,169,54,165,133,	0,1300,1627,1818,2115,
#Deleted in new
chr6_GL000254v2_alt	4636778	4640392	chr6_GL000254v2_alt:4636778-4640392	3	+	4637198	4639766	789624	8	113,415,169,54,165,141,197,899,	0,416,919,1246,1437,1734,2084,2715,
#Deleted in new
chr6_GL000254v2_alt	4636825	4640392	chr6_GL000254v2_alt:4636825-4640392	1	+	4637198	4639766	789624	7	784,169,54,165,141,197,899,	0,872,1199,1390,1687,2037,2668,
#Deleted in new
chr6_GL000254v2_alt	4636877	4640392	chr6_GL000254v2_alt:4636877-4640392	0	+	4636877	4636877	8553170	4	732,169,51,544,	0,820,1147,2971,
#Deleted in new
chr6_GL000254v2_alt	4637198	4640392	chr6_GL000254v2_alt:4637198-4640392	0	+	4637198	4637198	8553170	5	411,169,54,32,439,	0,499,826,1017,2755,
#Deleted in new
chr6_GL000254v2_alt	4638207	4640392	chr6_GL000254v2_alt:4638207-4640392	0	+	4638207	4638207	8553170	4	173,141,197,899,	0,305,655,1286,
#Deleted in new
chr6_GL000254v2_alt	4640594	4642784	chr6_GL000254v2_alt:4640594-4642784	3	+	4640621	4642607	0	9	79,218,117,93,86,85,43,75,194,	0,260,579,805,998,1186,1492,1733,1996,
#Deleted in new
chr6_GL000254v2_alt	4640638	4642402	chr6_GL000254v2_alt:4640638-4642402	0	+	4640638	4640638	8553170	7	434,117,93,86,85,43,75,	0,535,761,954,1142,1448,1689,
#Deleted in new
chr6_GL000254v2_alt	4644447	4648675	chr6_GL000254v2_alt:4644447-4648675	3	+	4644775	4648352	789624	7	150,136,161,216,390,274,425,	0,270,1131,1420,2663,3234,3803,
#Deleted in new
chr6_GL000254v2_alt	4645512	4648675	chr6_GL000254v2_alt:4645512-4648675	0	+	4645512	4645512	8553170	5	227,216,390,274,425,	0,355,1598,2169,2738,
#Deleted in new
chr6_GL000254v2_alt	4651657	4652281	chr6_GL000254v2_alt:4651657-4652281	7	+	4651657	4651657	16724991	1	624,	0,
#Deleted in new
chr6_GL000254v2_alt	4673732	4675631	chr6_GL000254v2_alt:4673732-4675631	7	+	4673732	4673732	16724991	3	553,152,286,	0,837,1613,
#Deleted in new
chr6_GL000254v2_alt	4685515	4690922	chr6_GL000254v2_alt:4685515-4690922	3	+	4685515	4685515	789624	5	122,100,96,194,246,	0,256,1082,1979,5161,
#Deleted in new
chr6_GL000254v2_alt	4685565	4687921	chr6_GL000254v2_alt:4685565-4687921	0	+	4685565	4685565	8553170	4	72,100,103,427,	0,206,1025,1929,
#Deleted in new
chr6_GL000254v2_alt	4685577	4690967	chr6_GL000254v2_alt:4685577-4690967	0	+	4685577	4685577	8553170	5	60,100,96,129,291,	0,194,1020,1982,5099,
#Deleted in new
chr6_GL000254v2_alt	4686253	4707856	chr6_GL000254v2_alt:4686253-4707856	3	-	4686822	4707637	789624	20	716,119,112,66,108,96,124,119,156,134,58,133,101,151,176,68,76,53,85,309,	0,1246,1588,13197,13485,13721,14087,14495,16268,16899,17393,17576,17819,18210,18725,19201,19455,19710,19910,21294,
#Deleted in new
chr6_GL000254v2_alt	4686253	4707838	chr6_GL000254v2_alt:4686253-4707838	0	-	4707370	4707637	789624	19	716,119,112,66,108,96,124,119,156,134,58,133,101,151,176,68,76,85,740,	0,1246,1588,13197,13485,13721,14087,14495,16268,16899,17393,17576,17819,18210,18725,19201,19455,19910,20845,
#Deleted in new
chr6_GL000254v2_alt	4686253	4708009	chr6_GL000254v2_alt:4686253-4708009	0	-	4686253	4686253	8553170	18	716,119,112,66,108,96,124,119,156,133,101,151,176,68,76,53,85,143,	0,1246,1588,13197,13485,13721,14087,14495,16268,17576,17819,18210,18725,19201,19455,19710,19910,21613,
#Deleted in new
chr6_GL000254v2_alt	4686260	4687617	chr6_GL000254v2_alt:4686260-4687617	0	+	4686260	4686260	8553170	2	433,36,	0,1321,
#Deleted in new
chr6_GL000254v2_alt	4686587	4699580	chr6_GL000254v2_alt:4686587-4699580	0	-	4686587	4686587	8553170	4	382,119,112,130,	0,912,1254,12863,
#Deleted in new
chr6_GL000254v2_alt	4686792	4700270	chr6_GL000254v2_alt:4686792-4700270	0	-	4686792	4686792	8553170	6	177,119,112,66,108,296,	0,707,1049,12658,12946,13182,
#Deleted in new
chr6_GL000254v2_alt	4687898	4700531	chr6_GL000254v2_alt:4687898-4700531	0	-	4687898	4687898	8553170	5	55,66,97,96,191,	0,11552,11851,12076,12442,
#Deleted in new
chr6_GL000254v2_alt	4699514	4700189	chr6_GL000254v2_alt:4699514-4700189	0	-	4699514	4699514	8553170	2	332,215,	0,460,
#Deleted in new
chr6_GL000254v2_alt	4700045	4703230	chr6_GL000254v2_alt:4700045-4703230	0	-	4700045	4700045	8553170	4	25,527,156,78,	0,295,2476,3107,
#Deleted in new
chr6_GL000254v2_alt	4703430	4704118	chr6_GL000254v2_alt:4703430-4704118	0	-	4703430	4703430	8553170	3	274,133,46,	0,399,642,
#Deleted in new
chr6_GL000254v2_alt	4703834	4707739	chr6_GL000254v2_alt:4703834-4707739	0	-	4703834	4703834	8553170	9	128,101,151,176,68,76,53,85,87,	0,238,629,1144,1620,1874,2129,2329,3818,
#Deleted in new
chr6_GL000254v2_alt	4703835	4707846	chr6_GL000254v2_alt:4703835-4707846	0	-	4703835	4703835	8553170	9	127,101,151,205,68,76,53,85,194,	0,237,628,1143,1619,1873,2128,2328,3817,
#Deleted in new
chr6_GL000254v2_alt	4707971	4712476	chr6_GL000254v2_alt:4707971-4712476	3	+	4708081	4712432	0	6	113,99,87,102,92,120,	0,618,3791,3959,4170,4385,
#Deleted in new
chr6_GL000254v2_alt	4708036	4712476	chr6_GL000254v2_alt:4708036-4712476	0	+	4708036	4708036	8553170	6	48,140,87,102,92,120,	0,512,3726,3894,4105,4320,
#Deleted in new
chr6_GL000254v2_alt	4708049	4712471	chr6_GL000254v2_alt:4708049-4712471	0	+	4708049	4708049	8553170	5	35,99,87,303,115,	0,540,3713,3881,4307,
#Deleted in new
chr6_GL000254v2_alt	4708057	4712476	chr6_GL000254v2_alt:4708057-4712476	0	+	4708057	4708057	8553170	7	27,99,158,87,102,92,120,	0,532,3408,3705,3873,4084,4299,
#Deleted in new
chr6_GL000254v2_alt	4708060	4712471	chr6_GL000254v2_alt:4708060-4712471	0	+	4708060	4708060	8553170	5	24,99,87,102,330,	0,529,3702,3870,4081,
#Deleted in new
chr6_GL000254v2_alt	4708093	4712476	chr6_GL000254v2_alt:4708093-4712476	0	+	4708093	4708093	8553170	5	595,87,102,92,120,	0,3669,3837,4048,4263,
#Deleted in new
chr6_GL000254v2_alt	4711286	4712476	chr6_GL000254v2_alt:4711286-4712476	0	+	4711286	4711286	8553170	2	563,546,	0,644,
#Deleted in new
chr6_GL000254v2_alt	4711831	4712476	chr6_GL000254v2_alt:4711831-4712476	0	+	4711831	4711831	8553170	3	201,92,120,	0,310,525,
#Deleted in new
chr6_GL000254v2_alt	4713097	4714791	chr6_GL000254v2_alt:4713097-4714791	3	+	4713385	4714522	789624	1	1694,	0,
#Deleted in new
chr6_GL000254v2_alt	4715073	4725463	chr6_GL000254v2_alt:4715073-4725463	3	-	4715241	4725106	789624	15	267,114,96,95,314,100,136,151,105,62,88,113,81,210,426,	0,389,656,1295,1541,7657,7953,8217,8476,8827,9010,9220,9476,9666,9964,
#Deleted in new
chr6_GL000254v2_alt	4715073	4716463	chr6_GL000254v2_alt:4715073-4716463	0	-	4715073	4715073	8553170	3	240,96,95,	0,656,1295,
#Deleted in new
chr6_GL000254v2_alt	4715073	4716792	chr6_GL000254v2_alt:4715073-4716792	0	-	4715073	4715073	8553170	4	503,96,95,178,	0,656,1295,1541,
#Deleted in new
chr6_GL000254v2_alt	4715073	4716852	chr6_GL000254v2_alt:4715073-4716852	0	-	4715073	4715073	8553170	5	267,114,96,95,97,	0,389,656,1295,1682,
#Deleted in new
chr6_GL000254v2_alt	4715536	4723365	chr6_GL000254v2_alt:4715536-4723365	0	-	4715536	4715536	8553170	6	40,96,560,100,136,75,	0,193,832,7194,7490,7754,
#Deleted in new
chr6_GL000254v2_alt	4716856	4724823	chr6_GL000254v2_alt:4716856-4724823	0	-	4716856	4724823	789624	10	72,100,136,151,105,38,88,113,81,84,	0,5874,6170,6434,6693,7044,7227,7437,7693,7883,
#Deleted in new
chr6_GL000254v2_alt	4723178	4723962	chr6_GL000254v2_alt:4723178-4723962	0	-	4723178	4723178	8553170	2	476,62,	0,722,
#Deleted in new
chr6_GL000254v2_alt	4723427	4725183	chr6_GL000254v2_alt:4723427-4725183	0	-	4723427	4723427	8553170	7	14,105,62,323,81,210,146,	0,122,473,656,1122,1312,1610,
#Deleted in new
chr6_GL000254v2_alt	4723599	4725138	chr6_GL000254v2_alt:4723599-4725138	0	-	4723599	4723599	8553170	7	55,62,88,113,131,210,101,	0,301,484,694,900,1140,1438,
#Deleted in new
chr6_GL000254v2_alt	4723991	4724948	chr6_GL000254v2_alt:4723991-4724948	0	-	4723991	4723991	8553170	4	180,113,81,209,	0,302,558,748,
#Deleted in new
chr6_GL000254v2_alt	4725237	4726869	chr6_GL000254v2_alt:4725237-4726869	1	+	4725792	4726781	789624	5	319,151,71,125,218,	0,468,872,1024,1414,
#Deleted in new
chr6_GL000254v2_alt	4725530	4726869	chr6_GL000254v2_alt:4725530-4726869	1	+	4725792	4726781	789624	4	326,71,125,218,	0,579,731,1121,
#Deleted in new
chr6_GL000254v2_alt	4725531	4726811	chr6_GL000254v2_alt:4725531-4726811	0	+	4725531	4725531	8553170	4	33,151,71,550,	0,174,578,730,
#Deleted in new
chr6_GL000254v2_alt	4725532	4726798	chr6_GL000254v2_alt:4725532-4726798	3	+	4725792	4726781	789624	5	32,146,71,125,147,	0,178,577,729,1119,
#Deleted in new
chr6_GL000254v2_alt	4725532	4726870	chr6_GL000254v2_alt:4725532-4726870	1	+	4725792	4726781	789624	5	32,151,71,125,219,	0,173,577,729,1119,
#Deleted in new
chr6_GL000254v2_alt	4725562	4726804	chr6_GL000254v2_alt:4725562-4726804	0	+	4725562	4725562	8553170	2	294,695,	0,547,
#Deleted in new
chr6_GL000254v2_alt	4725710	4734337	chr6_GL000254v2_alt:4725710-4734337	1	+	4725792	4732816	789624	4	146,71,125,1573,	0,399,551,7054,
#Deleted in new
chr6_GL000254v2_alt	4727589	4735260	chr6_GL000254v2_alt:4727589-4735260	3	-	4728037	4734546	789624	18	660,115,291,112,96,122,33,75,69,85,104,252,298,51,179,84,197,455,	0,776,1362,1759,1950,2141,2380,3034,3323,3473,3665,3854,4374,4760,4944,5378,6801,7216,
#Deleted in new
chr6_GL000254v2_alt	4727589	4734866	chr6_GL000254v2_alt:4727589-4734866	0	-	4727589	4727589	8553170	17	660,115,291,112,96,122,33,75,69,85,104,252,298,51,179,84,61,	0,776,1362,1759,1950,2141,2380,3034,3323,3473,3665,3854,4374,4760,4944,5378,7216,
#Deleted in new
chr6_GL000254v2_alt	4727589	4733039	chr6_GL000254v2_alt:4727589-4733039	0	-	4727589	4727589	8553170	15	660,115,291,112,96,122,33,75,69,85,104,252,51,179,72,	0,776,1362,1759,1950,2141,2380,3034,3323,3473,3665,3854,4760,4944,5378,
#Deleted in new
chr6_GL000254v2_alt	4727589	4734911	chr6_GL000254v2_alt:4727589-4734911	0	-	4727589	4727589	8553170	17	660,115,291,112,96,122,33,75,69,85,104,816,50,179,84,197,106,	0,776,1362,1759,1950,2141,2380,3034,3323,3473,3665,3854,4761,4944,5378,6801,7216,
#Deleted in new
chr6_GL000254v2_alt	4727589	4734457	chr6_GL000254v2_alt:4727589-4734457	0	-	4727589	4727589	8553170	16	660,115,291,287,122,33,75,69,85,104,252,298,51,179,84,67,	0,776,1362,1759,2141,2380,3034,3323,3473,3665,3854,4374,4760,4944,5378,6801,
#Deleted in new
chr6_GL000254v2_alt	4728041	4729866	chr6_GL000254v2_alt:4728041-4729866	0	-	4728041	4728041	8553170	5	208,115,291,287,136,	0,324,910,1307,1689,
#Deleted in new
chr6_GL000254v2_alt	4729030	4731559	chr6_GL000254v2_alt:4729030-4731559	0	-	4729030	4729030	8553170	9	212,112,96,272,75,69,85,104,116,	0,318,509,700,1593,1882,2032,2224,2413,
#Deleted in new
chr6_GL000254v2_alt	4731622	4733922	chr6_GL000254v2_alt:4731622-4733922	0	-	4731622	4731622	8553170	5	639,51,179,84,56,	0,727,911,1345,2244,
#Deleted in new
chr6_GL000254v2_alt	4731741	4733929	chr6_GL000254v2_alt:4731741-4733929	0	-	4731741	4731741	8553170	6	520,51,179,84,130,63,	0,608,792,1226,1408,2125,
#Deleted in new
chr6_GL000254v2_alt	4732034	4733628	chr6_GL000254v2_alt:4732034-4733628	0	-	4732034	4732034	8553170	5	227,51,179,84,479,	0,315,499,933,1115,
#Deleted in new
chr6_GL000254v2_alt	4732092	4733322	chr6_GL000254v2_alt:4732092-4733322	0	-	4732092	4732092	8553170	4	169,51,179,355,	0,257,441,875,
#Deleted in new
chr6_GL000254v2_alt	4732379	4734746	chr6_GL000254v2_alt:4732379-4734746	0	-	4732379	4734546	789624	4	21,179,84,356,	0,154,588,2011,
#Deleted in new
chr6_GL000254v2_alt	4735629	4750321	chr6_GL000254v2_alt:4735629-4750321	3	-	4737695	4749975	0	8	2078,35,90,342,399,261,171,383,	0,4261,4434,4603,5295,13521,13998,14309,
#Deleted in new
chr6_GL000254v2_alt	4735629	4750185	chr6_GL000254v2_alt:4735629-4750185	1	-	4737695	4749975	789624	9	2078,35,90,342,399,54,261,171,247,	0,4261,4434,4603,5295,8412,13521,13998,14309,
#Deleted in new
chr6_GL000254v2_alt	4735629	4750178	chr6_GL000254v2_alt:4735629-4750178	0	-	4735629	4735629	8553170	7	2078,35,90,85,181,171,240,	0,4261,4434,4603,13601,13998,14309,
#Deleted in new
chr6_GL000254v2_alt	4735632	4750321	chr6_GL000254v2_alt:4735632-4750321	1	-	4737695	4749975	789624	7	2075,35,90,342,399,171,383,	0,4258,4431,4600,5292,13995,14306,
#Deleted in new
chr6_GL000254v2_alt	4735666	4749990	chr6_GL000254v2_alt:4735666-4749990	0	-	4735666	4735666	8553170	6	364,90,399,261,171,52,	0,4818,5258,13484,13961,14272,
#Deleted in new
chr6_GL000254v2_alt	4739572	4750146	chr6_GL000254v2_alt:4739572-4750146	1	-	4739710	4749975	789624	7	353,90,342,399,261,171,208,	0,491,660,1352,9578,10055,10366,
#Deleted in new
chr6_GL000254v2_alt	4739598	4749983	chr6_GL000254v2_alt:4739598-4749983	0	-	4739598	4739598	8553170	4	1725,261,171,45,	0,9552,10029,10340,
#Deleted in new
chr6_GL000254v2_alt	4740203	4749975	chr6_GL000254v2_alt:4740203-4749975	0	-	4740203	4740203	8553170	5	371,399,261,171,37,	0,721,8947,9424,9735,
#Deleted in new
chr6_GL000254v2_alt	4740235	4750321	chr6_GL000254v2_alt:4740235-4750321	1	-	4740235	4749975	789624	4	82,181,171,383,	0,8995,9392,9703,
#Deleted in new
chr6_GL000254v2_alt	4740924	4749980	chr6_GL000254v2_alt:4740924-4749980	0	-	4740924	4749975	789624	3	399,171,42,	0,8703,9014,
#Deleted in new
chr6_GL000254v2_alt	4748947	4749889	chr6_GL000254v2_alt:4748947-4749889	0	-	4748947	4748947	8553170	2	464,262,	0,680,
#Deleted in new
chr6_GL000254v2_alt	4750351	4753670	chr6_GL000254v2_alt:4750351-4753670	3	-	4750945	4752850	789624	2	2568,83,	0,3236,
#Deleted in new
chr6_GL000254v2_alt	4752402	4753876	chr6_GL000254v2_alt:4752402-4753876	0	-	4752402	4752850	789624	2	517,64,	0,1410,
#Deleted in new
chr6_GL000254v2_alt	4754492	4758861	chr6_GL000254v2_alt:4754492-4758861	1	-	4754676	4757859	0	8	244,223,475,214,212,832,256,66,	0,438,821,1452,1821,2177,3160,4303,
#Deleted in new
chr6_GL000254v2_alt	4754492	4758881	chr6_GL000254v2_alt:4754492-4758881	3	-	4754676	4757859	0	8	244,223,475,214,212,832,259,86,	0,438,821,1452,1821,2177,3160,4303,
#Deleted in new
chr6_GL000254v2_alt	4754493	4758948	chr6_GL000254v2_alt:4754493-4758948	1	-	4754680	4757859	0	9	243,53,18,475,214,212,832,259,153,	0,437,642,820,1451,1820,2176,3159,4302,
#Deleted in new
chr6_GL000254v2_alt	4755466	4758864	chr6_GL000254v2_alt:4755466-4758864	0	-	4755466	4755466	8553170	4	322,214,212,69,	0,478,847,3329,
#Deleted in new
chr6_GL000254v2_alt	4755518	4757803	chr6_GL000254v2_alt:4755518-4757803	0	-	4755518	4755518	8553170	4	270,214,212,151,	0,426,795,2134,
#Deleted in new
chr6_GL000254v2_alt	4755597	4756394	chr6_GL000254v2_alt:4755597-4756394	0	-	4755597	4755597	8553170	2	191,450,	0,347,
#Deleted in new
chr6_GL000254v2_alt	4756802	4758852	chr6_GL000254v2_alt:4756802-4758852	0	-	4756802	4756802	8553170	2	699,57,	0,1993,
#Deleted in new
chr6_GL000254v2_alt	4757173	4758879	chr6_GL000254v2_alt:4757173-4758879	0	-	4757173	4757859	789624	3	328,290,84,	0,479,1622,
#Deleted in new
chr6_GL000254v2_alt	4757319	4765169	chr6_GL000254v2_alt:4757319-4765169	0	-	4757319	4757859	789624	4	182,259,60,250,	0,333,2585,7600,
#Deleted in new
chr6_GL000254v2_alt	4757544	4758891	chr6_GL000254v2_alt:4757544-4758891	0	-	4757544	4757544	8553170	2	367,96,	0,1251,
#Deleted in new
chr6_GL000254v2_alt	4757715	4758737	chr6_GL000254v2_alt:4757715-4758737	0	-	4757715	4757859	789624	2	196,175,	0,847,
#Deleted in new
chr6_GL000254v2_alt	4759561	4765202	chr6_GL000254v2_alt:4759561-4765202	0	-	4759561	4759561	8553170	3	237,60,283,	0,343,5358,
#Deleted in new
chr6_GL000254v2_alt	4774915	4775433	chr6_GL000254v2_alt:4774915-4775433	7	+	4774915	4774915	16724991	1	518,	0,
#Deleted in new
chr6_GL000254v2_alt	4801485	4802181	chr6_GL000254v2_alt:4801485-4802181	7	-	4801485	4801485	16724991	1	696,	0,
#Deleted in new
chr6_GL000254v2_alt	4825322	4825424	chr6_GL000254v2_alt:4825322-4825424	7	-	4825322	4825322	16724991	1	102,	0,
#Deleted in new
chr6_GL000254v2_alt	4827483	4827813	chr6_GL000254v2_alt:4827483-4827813	3	+	4827483	4827483	8553170	1	330,	0,
#Deleted in new
chr6_GL000254v2_alt	4827808	4827813	chr6_GL000254v2_alt:4827808-4827813	0	+	4827808	4827808	8553170	1	5,	0,
#Deleted in new
chr6_GL000255v2_alt	49223	49595	chr6_GL000255v2_alt:49223-49595	7	-	49223	49223	16724991	1	372,	0,
#Deleted in new
chr6_GL000255v2_alt	103449	104587	chr6_GL000255v2_alt:103449-104587	3	-	103449	103449	8553170	2	452,257,	0,881,
#Deleted in new
chr6_GL000255v2_alt	125205	128932	chr6_GL000255v2_alt:125205-128932	3	-	125205	125205	8553170	2	2391,67,	0,3660,
#Deleted in new
chr6_GL000255v2_alt	126996	127628	chr6_GL000255v2_alt:126996-127628	7	+	126996	126996	16724991	1	632,	0,
#Deleted in new
chr6_GL000255v2_alt	154413	155488	chr6_GL000255v2_alt:154413-155488	7	-	154413	154413	16724991	1	1075,	0,
#Deleted in new
chr6_GL000255v2_alt	162111	162904	chr6_GL000255v2_alt:162111-162904	3	+	162111	162111	789624	2	201,212,	0,581,
#Deleted in new
chr6_GL000255v2_alt	168583	189571	chr6_GL000255v2_alt:168583-189571	3	-	169651	189214	789624	8	1664,27,33,116,23,231,96,777,	0,4234,5806,5971,8694,17010,18890,20211,
#Deleted in new
chr6_GL000255v2_alt	168583	189570	chr6_GL000255v2_alt:168583-189570	1	-	169836	189214	789624	9	1272,112,27,33,116,23,231,96,776,	0,1552,4234,5806,5971,8694,17010,18890,20211,
#Deleted in new
chr6_GL000255v2_alt	168583	174571	chr6_GL000255v2_alt:168583-174571	0	-	169651	174571	789624	5	1664,27,72,33,17,	0,4234,4490,5806,5971,
#Deleted in new
chr6_GL000255v2_alt	168584	189495	chr6_GL000255v2_alt:168584-189495	0	-	168584	168584	8553170	6	5838,116,23,231,96,701,	0,5970,8693,17009,18889,20210,
#Deleted in new
chr6_GL000255v2_alt	170055	173166	chr6_GL000255v2_alt:170055-173166	0	-	170055	170055	8553170	2	192,349,	0,2762,
#Deleted in new
chr6_GL000255v2_alt	176888	187558	chr6_GL000255v2_alt:176888-187558	0	-	176888	176888	8553170	3	412,231,85,	0,8705,10585,
#Deleted in new
chr6_GL000255v2_alt	180357	185765	chr6_GL000255v2_alt:180357-185765	0	-	180357	180357	8553170	2	517,172,	0,5236,
#Deleted in new
chr6_GL000255v2_alt	181226	181326	chr6_GL000255v2_alt:181226-181326	3	+	181226	181226	8553170	1	100,	0,
#Deleted in new
chr6_GL000255v2_alt	209457	210118	chr6_GL000255v2_alt:209457-210118	3	+	209484	209868	789624	2	150,316,	0,345,
#Deleted in new
chr6_GL000255v2_alt	234710	236041	chr6_GL000255v2_alt:234710-236041	7	-	234710	234710	16724991	1	1331,	0,
#Deleted in new
chr6_GL000255v2_alt	243053	243352	chr6_GL000255v2_alt:243053-243352	3	+	243053	243053	8553170	1	299,	0,
#Deleted in new
chr6_GL000255v2_alt	251780	253062	chr6_GL000255v2_alt:251780-253062	3	+	251780	251780	8553170	3	30,194,808,	0,110,474,
#Deleted in new
chr6_GL000255v2_alt	252377	254114	chr6_GL000255v2_alt:252377-254114	3	+	252377	252377	8553170	2	80,237,	0,1500,
#Deleted in new
chr6_GL000255v2_alt	260362	270808	chr6_GL000255v2_alt:260362-270808	3	-	260578	269532	789624	7	1802,105,127,92,82,269,223,	0,3949,4702,5171,8728,9161,10223,
#Deleted in new
chr6_GL000255v2_alt	260362	270894	chr6_GL000255v2_alt:260362-270894	0	-	260362	260362	8553170	6	1802,105,561,82,168,309,	0,3949,4702,8728,9113,10223,
#Deleted in new
chr6_GL000255v2_alt	292257	293185	chr6_GL000255v2_alt:292257-293185	7	-	292257	292257	16724991	1	928,	0,
#Deleted in new
chr6_GL000255v2_alt	309790	310818	chr6_GL000255v2_alt:309790-310818	3	-	309790	310753	789624	1	1028,	0,
#Deleted in new
chr6_GL000255v2_alt	329576	342104	chr6_GL000255v2_alt:329576-342104	3	+	329576	342104	789624	3	133,52,229,	0,1124,12299,
#Deleted in new
chr6_GL000255v2_alt	337403	338179	chr6_GL000255v2_alt:337403-338179	7	-	337403	337403	16724991	1	776,	0,
#Deleted in new
chr6_GL000255v2_alt	342152	342748	chr6_GL000255v2_alt:342152-342748	7	-	342152	342152	16724991	1	596,	0,
#Deleted in new
chr6_GL000255v2_alt	351787	352893	chr6_GL000255v2_alt:351787-352893	3	-	351886	352828	789624	1	1106,	0,
#Deleted in new
chr6_GL000255v2_alt	366529	367468	chr6_GL000255v2_alt:366529-367468	7	+	366529	366529	16724991	1	939,	0,
#Deleted in new
chr6_GL000255v2_alt	377475	378411	chr6_GL000255v2_alt:377475-378411	3	+	377475	378411	789624	1	936,	0,
#Deleted in new
chr6_GL000255v2_alt	389793	394492	chr6_GL000255v2_alt:389793-394492	3	+	389793	389793	8553170	2	137,252,	0,4447,
#Deleted in new
chr6_GL000255v2_alt	403460	404397	chr6_GL000255v2_alt:403460-404397	7	-	403460	403460	16724991	1	937,	0,
#Deleted in new
chr6_GL000255v2_alt	438892	440164	chr6_GL000255v2_alt:438892-440164	3	+	439225	440164	789624	1	1272,	0,
#Deleted in new
chr6_GL000255v2_alt	447107	448043	chr6_GL000255v2_alt:447107-448043	7	+	447107	447107	16724991	1	936,	0,
#Deleted in new
chr6_GL000255v2_alt	480859	481803	chr6_GL000255v2_alt:480859-481803	7	+	480859	480859	16724991	1	944,	0,
#Deleted in new
chr6_GL000255v2_alt	494850	495781	chr6_GL000255v2_alt:494850-495781	7	-	494850	494850	16724991	1	931,	0,
#Deleted in new
chr6_GL000255v2_alt	682751	683698	chr6_GL000255v2_alt:682751-683698	7	+	682751	682751	16724991	2	582,270,	0,677,
#Deleted in new
chr6_GL000255v2_alt	688078	697436	chr6_GL000255v2_alt:688078-697436	3	-	688078	688078	8553170	3	76,38,104,	0,418,9254,
#Deleted in new
chr6_GL000255v2_alt	690973	693936	chr6_GL000255v2_alt:690973-693936	1	-	692163	693111	789624	2	2229,253,	0,2710,
#Deleted in new
chr6_GL000255v2_alt	690973	722536	chr6_GL000255v2_alt:690973-722536	3	-	692163	693111	789624	5	2229,48,125,124,85,	0,3408,4796,6359,31478,
#Deleted in new
chr6_GL000255v2_alt	690973	693202	chr6_GL000255v2_alt:690973-693202	1	-	692163	693111	789624	1	2229,	0,
#Deleted in new
chr6_GL000255v2_alt	704774	706423	chr6_GL000255v2_alt:704774-706423	3	+	705484	706423	789624	1	1649,	0,
#Deleted in new
chr6_GL000255v2_alt	705407	706446	chr6_GL000255v2_alt:705407-706446	1	+	705478	706423	789624	1	1039,	0,
#Deleted in new
chr6_GL000255v2_alt	722645	729794	chr6_GL000255v2_alt:722645-729794	3	+	727235	728186	789624	4	27,116,51,2830,	0,1273,3224,4319,
#Deleted in new
chr6_GL000255v2_alt	722652	729794	chr6_GL000255v2_alt:722652-729794	1	+	727235	728186	789624	4	20,116,51,2834,	0,1266,3217,4308,
#Deleted in new
chr6_GL000255v2_alt	722667	726552	chr6_GL000255v2_alt:722667-726552	0	+	722667	722667	8553170	4	5,116,164,211,	0,1251,2818,3674,
#Deleted in new
chr6_GL000255v2_alt	725235	729794	chr6_GL000255v2_alt:725235-729794	1	+	727235	728186	789624	3	414,1259,580,	0,1705,3979,
#Deleted in new
chr6_GL000255v2_alt	726905	728199	chr6_GL000255v2_alt:726905-728199	1	+	727235	728186	789624	1	1294,	0,
#Deleted in new
chr6_GL000255v2_alt	726960	728186	chr6_GL000255v2_alt:726960-728186	0	+	726960	726960	8553170	2	256,717,	0,509,
#Deleted in new
chr6_GL000255v2_alt	726960	728186	chr6_GL000255v2_alt:726960-728186	0	+	726960	726960	8553170	2	256,730,	0,496,
#Deleted in new
chr6_GL000255v2_alt	730061	735272	chr6_GL000255v2_alt:730061-735272	7	-	730061	730061	16724991	2	360,22,	0,5189,
#Deleted in new
chr6_GL000255v2_alt	740490	741537	chr6_GL000255v2_alt:740490-741537	7	-	740490	740490	16724991	1	1047,	0,
#Deleted in new
chr6_GL000255v2_alt	752231	753368	chr6_GL000255v2_alt:752231-753368	3	-	752231	753368	789624	1	1137,	0,
#Deleted in new
chr6_GL000255v2_alt	754737	755143	chr6_GL000255v2_alt:754737-755143	7	-	754737	754737	16724991	1	406,	0,
#Deleted in new
chr6_GL000255v2_alt	762975	776022	chr6_GL000255v2_alt:762975-776022	3	+	762975	762975	8553170	4	31,57,500,289,	0,7811,9659,12758,
#Deleted in new
chr6_GL000255v2_alt	794890	799039	chr6_GL000255v2_alt:794890-799039	3	+	794890	794890	789624	3	165,95,2517,	0,529,1632,
#Deleted in new
chr6_GL000255v2_alt	794946	797628	chr6_GL000255v2_alt:794946-797628	0	+	794946	794946	8553170	4	109,95,117,78,	0,473,1576,2604,
#Deleted in new
chr6_GL000255v2_alt	803244	804035	chr6_GL000255v2_alt:803244-804035	7	-	803244	803244	16724991	1	791,	0,
#Deleted in new
chr6_GL000255v2_alt	818716	819664	chr6_GL000255v2_alt:818716-819664	7	+	818716	818716	16724991	1	948,	0,
#Deleted in new
chr6_GL000255v2_alt	821110	893551	chr6_GL000255v2_alt:821110-893551	3	-	869054	893304	0	19	739,176,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,553,	0,47942,48895,49261,49970,50792,51298,51503,53002,53630,55325,56952,57644,65503,66154,66506,67707,68292,71888,
#Deleted in new
chr6_GL000255v2_alt	821110	825425	chr6_GL000255v2_alt:821110-825425	3	-	821378	825201	789624	2	739,251,	0,4064,
#Deleted in new
chr6_GL000255v2_alt	839420	840348	chr6_GL000255v2_alt:839420-840348	7	+	839420	839420	16724991	1	928,	0,
#Deleted in new
chr6_GL000255v2_alt	842970	843260	chr6_GL000255v2_alt:842970-843260	7	+	842970	842970	16724991	1	290,	0,
#Deleted in new
chr6_GL000255v2_alt	847760	847844	chr6_GL000255v2_alt:847760-847844	3	+	847760	847760	789624	1	84,	0,
#Deleted in new
chr6_GL000255v2_alt	848019	848537	chr6_GL000255v2_alt:848019-848537	7	+	848019	848019	16724991	1	518,	0,
#Deleted in new
chr6_GL000255v2_alt	852966	854550	chr6_GL000255v2_alt:852966-854550	3	+	853456	854395	789624	1	1584,	0,
#Deleted in new
chr6_GL000255v2_alt	867741	893526	chr6_GL000255v2_alt:867741-893526	1	-	869054	893304	0	18	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,528,	0,2264,2630,3339,4161,4667,4872,6371,6999,8694,10321,11013,18872,19523,19875,21076,21661,25257,
#Deleted in new
chr6_GL000255v2_alt	867741	898648	chr6_GL000255v2_alt:867741-898648	1	-	869054	897898	0	22	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,204,85,286,	0,2264,2630,3339,4161,4667,4872,6371,6999,8694,10321,11013,18872,19523,19875,21076,21661,25257,26858,29167,30072,30621,
#Deleted in new
chr6_GL000255v2_alt	867741	898673	chr6_GL000255v2_alt:867741-898673	1	-	869054	897898	0	23	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,186,204,85,311,	0,2264,2630,3339,4161,4667,4872,6371,6999,8694,10321,11013,18872,19523,19875,21076,21661,25257,26858,28229,29167,30072,30621,
#Deleted in new
chr6_GL000255v2_alt	867741	874245	chr6_GL000255v2_alt:867741-874245	0	-	867741	867741	8553170	5	1350,94,108,117,133,	0,4161,4667,4872,6371,
#Deleted in new
chr6_GL000255v2_alt	867741	898447	chr6_GL000255v2_alt:867741-898447	0	-	867741	867741	8553170	23	1487,144,129,128,94,108,117,133,151,78,64,243,192,66,102,171,135,161,21,122,204,85,85,	0,2264,2630,3339,4161,4667,4872,6371,6999,8694,10321,11013,18872,19523,19875,21076,21661,25257,26858,28293,29167,30072,30621,
#Deleted in new
chr6_GL000255v2_alt	868825	870661	chr6_GL000255v2_alt:868825-870661	0	-	868825	868825	8553170	3	403,144,290,	0,1180,1546,
#Deleted in new
chr6_GL000255v2_alt	870424	897898	chr6_GL000255v2_alt:870424-897898	0	-	870424	870424	8553170	19	76,128,94,108,117,133,78,64,243,192,66,102,171,135,161,21,186,204,85,	0,656,1478,1984,2189,3688,6011,7638,8330,16189,16840,17192,18393,18978,22574,24175,25546,26484,27389,
#Deleted in new
chr6_GL000255v2_alt	870921	872101	chr6_GL000255v2_alt:870921-872101	0	-	870921	870921	8553170	2	287,199,	0,981,
#Deleted in new
chr6_GL000255v2_alt	873965	878111	chr6_GL000255v2_alt:873965-878111	0	-	873965	873965	8553170	3	280,78,49,	0,2470,4097,
#Deleted in new
chr6_GL000255v2_alt	874216	897900	chr6_GL000255v2_alt:874216-897900	1	-	874216	897898	0	14	29,78,64,243,192,66,102,171,135,161,21,186,204,87,	0,2219,3846,4538,12397,13048,13400,14601,15186,18782,20383,21754,22692,23597,
#Deleted in new
chr6_GL000255v2_alt	887316	889774	chr6_GL000255v2_alt:887316-889774	0	-	887316	887316	8553170	4	14,102,171,372,	0,300,1501,2086,
#Deleted in new
chr6_GL000255v2_alt	895411	898580	chr6_GL000255v2_alt:895411-898580	0	-	895411	895411	8553170	4	745,204,85,218,	0,1497,2402,2951,
#Deleted in new
chr6_GL000255v2_alt	901561	901845	chr6_GL000255v2_alt:901561-901845	7	-	901561	901561	16724991	1	284,	0,
#Deleted in new
chr6_GL000255v2_alt	922480	937871	chr6_GL000255v2_alt:922480-937871	1	+	922709	936682	0	7	317,348,114,21,21,21,1203,	0,2337,9167,10659,10920,13717,14188,
#Deleted in new
chr6_GL000255v2_alt	922498	937873	chr6_GL000255v2_alt:922498-937873	1	+	922709	936682	0	8	299,348,114,21,21,117,21,1205,	0,2319,9149,10641,10902,13279,13699,14170,
#Deleted in new
chr6_GL000255v2_alt	922547	931765	chr6_GL000255v2_alt:922547-931765	0	+	922547	922547	8553170	3	250,343,118,	0,2275,9100,
#Deleted in new
chr6_GL000255v2_alt	922591	937873	chr6_GL000255v2_alt:922591-937873	1	+	922709	936376	0	7	206,348,114,21,21,117,1676,	0,2226,9056,10548,10809,13186,13606,
#Deleted in new
chr6_GL000255v2_alt	922629	925423	chr6_GL000255v2_alt:922629-925423	0	+	922629	922629	8553170	2	168,606,	0,2188,
#Deleted in new
chr6_GL000255v2_alt	922709	937873	chr6_GL000255v2_alt:922709-937873	3	+	922709	936947	0	7	88,348,114,21,21,21,955,	0,2108,8938,10430,10691,13488,14209,
#Deleted in new
chr6_GL000255v2_alt	922709	937873	chr6_GL000255v2_alt:922709-937873	1	+	922709	936947	0	8	88,348,114,21,21,48,21,955,	0,2108,8938,10430,10691,12961,13488,14209,
#Deleted in new
chr6_GL000255v2_alt	922709	937873	chr6_GL000255v2_alt:922709-937873	1	+	922709	936682	0	7	88,114,21,21,117,21,1205,	0,8938,10430,10691,13068,13488,13959,
#Deleted in new
chr6_GL000255v2_alt	922709	937873	chr6_GL000255v2_alt:922709-937873	1	+	922709	936947	789624	8	88,348,114,21,21,117,21,955,	0,2108,8938,10430,10691,13068,13488,14209,
#Deleted in new
chr6_GL000255v2_alt	922709	937873	chr6_GL000255v2_alt:922709-937873	1	+	922709	936682	0	8	88,348,114,21,21,48,21,1205,	0,2108,8938,10430,10691,12961,13488,13959,
#Deleted in new
chr6_GL000255v2_alt	922715	937873	chr6_GL000255v2_alt:922715-937873	0	+	922715	936947	0	6	82,348,114,21,21,955,	0,2102,8932,10424,10685,14203,
#Deleted in new
chr6_GL000255v2_alt	924817	937873	chr6_GL000255v2_alt:924817-937873	0	+	924817	936682	789624	6	348,114,21,21,21,1205,	0,6830,8322,8583,11380,11851,
#Deleted in new
chr6_GL000255v2_alt	924817	937873	chr6_GL000255v2_alt:924817-937873	0	+	924817	924817	8553170	8	348,138,114,21,21,117,21,955,	0,5308,6830,8322,8583,10960,11380,12101,
#Deleted in new
chr6_GL000255v2_alt	924817	937873	chr6_GL000255v2_alt:924817-937873	0	+	924817	924817	8553170	8	348,138,114,21,21,117,21,1205,	0,5308,6830,8322,8583,10960,11380,11851,
#Deleted in new
chr6_GL000255v2_alt	937892	942657	chr6_GL000255v2_alt:937892-942657	1	-	938000	942506	789624	4	1367,102,127,274,	0,2995,3542,4491,
#Deleted in new
chr6_GL000255v2_alt	937983	946603	chr6_GL000255v2_alt:937983-946603	3	-	938000	942506	789624	6	1276,102,127,33,393,49,	0,2904,3451,4400,4493,8571,
#Deleted in new
chr6_GL000255v2_alt	938000	942805	chr6_GL000255v2_alt:938000-942805	1	-	938000	942805	789624	4	1126,67,145,21,	0,2922,3434,4784,
#Deleted in new
chr6_GL000255v2_alt	973609	974032	chr6_GL000255v2_alt:973609-974032	7	-	973609	973609	16724991	1	423,	0,
#Deleted in new
chr6_GL000255v2_alt	985814	989566	chr6_GL000255v2_alt:985814-989566	1	+	986503	989447	789624	8	226,222,270,276,276,117,33,124,	0,531,883,1398,2256,2672,3236,3628,
#Deleted in new
chr6_GL000255v2_alt	986020	987011	chr6_GL000255v2_alt:986020-987011	7	-	986020	986020	16724991	1	991,	0,
#Deleted in new
chr6_GL000255v2_alt	986318	987271	chr6_GL000255v2_alt:986318-987271	0	+	986503	987271	789624	3	249,270,59,	0,379,894,
#Deleted in new
chr6_GL000255v2_alt	986379	989565	chr6_GL000255v2_alt:986379-989565	1	+	986503	989447	789624	7	188,270,276,276,117,33,123,	0,318,833,1691,2107,2671,3063,
#Deleted in new
chr6_GL000255v2_alt	986431	987455	chr6_GL000255v2_alt:986431-987455	0	+	986431	986431	8553170	2	536,243,	0,781,
#Deleted in new
chr6_GL000255v2_alt	986447	990338	chr6_GL000255v2_alt:986447-990338	3	+	986503	990217	789624	7	120,270,276,276,117,33,414,	0,250,765,1623,2039,2603,3477,
#Deleted in new
chr6_GL000255v2_alt	986466	989566	chr6_GL000255v2_alt:986466-989566	0	+	986466	986466	8553170	5	28,187,117,33,124,	0,1693,2020,2584,2976,
#Deleted in new
chr6_GL000255v2_alt	986473	988127	chr6_GL000255v2_alt:986473-988127	0	+	986473	986473	8553170	4	94,158,276,57,	0,336,739,1597,
#Deleted in new
chr6_GL000255v2_alt	986503	989566	chr6_GL000255v2_alt:986503-989566	1	+	986503	989447	0	6	64,270,276,117,33,124,	0,194,709,1983,2547,2939,
#Deleted in new
chr6_GL000255v2_alt	986543	987392	chr6_GL000255v2_alt:986543-987392	0	+	986543	986543	8553170	2	424,163,	0,686,
#Deleted in new
chr6_GL000255v2_alt	986979	988339	chr6_GL000255v2_alt:986979-988339	0	+	986979	986979	8553170	2	509,269,	0,1091,
#Deleted in new
chr6_GL000255v2_alt	987078	989566	chr6_GL000255v2_alt:987078-989566	0	+	987078	989447	789624	6	44,202,276,117,33,124,	0,208,992,1408,1972,2364,
#Deleted in new
chr6_GL000255v2_alt	987196	989566	chr6_GL000255v2_alt:987196-989566	0	+	987196	987196	8553170	4	292,276,117,516,	0,874,1290,1854,
#Deleted in new
chr6_GL000255v2_alt	988093	1001571	chr6_GL000255v2_alt:988093-1001571	0	+	988093	988093	8553170	5	253,117,33,67,153,	0,393,957,13071,13325,
#Deleted in new
chr6_GL000255v2_alt	988493	992393	chr6_GL000255v2_alt:988493-992393	0	+	988493	988493	8553170	2	110,1395,	0,2505,
#Deleted in new
chr6_GL000255v2_alt	988573	990338	chr6_GL000255v2_alt:988573-990338	0	+	988573	990217	789624	3	30,51,414,	0,459,1351,
#Deleted in new
chr6_GL000255v2_alt	989642	1012093	chr6_GL000255v2_alt:989642-1012093	0	-	989642	989642	789624	6	539,131,471,336,278,150,	0,1764,11366,11951,20555,22301,
#Deleted in new
chr6_GL000255v2_alt	989710	990181	chr6_GL000255v2_alt:989710-990181	7	-	989710	989710	16724991	1	471,	0,
#Deleted in new
chr6_GL000255v2_alt	998078	1012037	chr6_GL000255v2_alt:998078-1012037	3	-	998078	998078	8553170	6	1788,236,121,336,255,94,	0,2930,3299,3515,10436,13865,
#Deleted in new
chr6_GL000255v2_alt	1000801	1001487	chr6_GL000255v2_alt:1000801-1001487	0	-	1000801	1000801	8553170	2	443,110,	0,576,
#Deleted in new
chr6_GL000255v2_alt	1004772	1012013	chr6_GL000255v2_alt:1004772-1012013	7	-	1004772	1004772	16724991	6	125,144,278,157,255,70,	0,2278,2536,3219,3742,7171,
#Deleted in new
chr6_GL000255v2_alt	1011332	1011557	chr6_GL000255v2_alt:1011332-1011557	7	+	1011332	1011332	16724991	1	225,	0,
#Deleted in new
chr6_GL000255v2_alt	1013413	1013515	chr6_GL000255v2_alt:1013413-1013515	3	+	1013413	1013413	8553170	1	102,	0,
#Deleted in new
chr6_GL000255v2_alt	1013769	1014190	chr6_GL000255v2_alt:1013769-1014190	7	-	1013769	1013769	16724991	1	421,	0,
#Deleted in new
chr6_GL000255v2_alt	1053844	1055738	chr6_GL000255v2_alt:1053844-1055738	5	+	1053844	1053844	16724991	4	14,68,254,319,	0,847,1190,1575,
#Deleted in new
chr6_GL000255v2_alt	1053938	1056070	chr6_GL000255v2_alt:1053938-1056070	4	+	1053938	1053938	16724991	4	33,68,81,651,	0,753,1269,1481,
#Deleted in new
chr6_GL000255v2_alt	1054336	1060565	chr6_GL000255v2_alt:1054336-1060565	7	+	1054336	1054336	16724991	7	47,68,196,429,191,1981,461,	0,355,756,1083,1979,2341,5768,
#Deleted in new
chr6_GL000255v2_alt	1054737	1055712	chr6_GL000255v2_alt:1054737-1055712	7	-	1054737	1054737	16724991	1	975,	0,
#Deleted in new
chr6_GL000255v2_alt	1054888	1060565	chr6_GL000255v2_alt:1054888-1060565	5	+	1054888	1054888	16724991	3	400,249,620,	0,531,5057,
#Deleted in new
chr6_GL000255v2_alt	1055205	1060565	chr6_GL000255v2_alt:1055205-1060565	5	+	1055205	1055205	16724991	3	83,249,4250,	0,214,1110,
#Deleted in new
chr6_GL000255v2_alt	1055224	1056098	chr6_GL000255v2_alt:1055224-1056098	5	+	1055224	1055224	16724991	3	64,249,192,	0,195,682,
#Deleted in new
chr6_GL000255v2_alt	1063189	1065194	chr6_GL000255v2_alt:1063189-1065194	7	+	1063189	1063189	16724991	5	258,276,117,37,43,	0,846,1246,1775,1962,
#Deleted in new
chr6_GL000255v2_alt	1065968	1066765	chr6_GL000255v2_alt:1065968-1066765	7	-	1065968	1065968	16724991	1	797,	0,
#Deleted in new
chr6_GL000255v2_alt	1075333	1075465	chr6_GL000255v2_alt:1075333-1075465	7	-	1075333	1075333	16724991	1	132,	0,
#Deleted in new
chr6_GL000255v2_alt	1089732	1093907	chr6_GL000255v2_alt:1089732-1093907	3	+	1089804	1093148	789624	8	78,82,270,276,276,117,33,374,	0,869,1080,1576,2451,2849,3411,3801,
#Deleted in new
chr6_GL000255v2_alt	1089744	1093902	chr6_GL000255v2_alt:1089744-1093902	1	+	1090610	1093148	0	8	66,185,270,276,276,117,92,300,	0,754,1068,1564,2439,2837,3399,3858,
#Deleted in new
chr6_GL000255v2_alt	1090150	1091129	chr6_GL000255v2_alt:1090150-1091129	7	-	1090150	1090150	16724991	1	979,	0,
#Deleted in new
chr6_GL000255v2_alt	1090586	1093907	chr6_GL000255v2_alt:1090586-1093907	1	+	1090610	1093148	0	7	97,270,276,276,117,33,374,	0,226,722,1597,1995,2557,2947,
#Deleted in new
chr6_GL000255v2_alt	1090610	1093907	chr6_GL000255v2_alt:1090610-1093907	1	+	1090610	1093148	0	5	73,270,117,33,374,	0,202,1971,2533,2923,
#Deleted in new
chr6_GL000255v2_alt	1090610	1093907	chr6_GL000255v2_alt:1090610-1093907	1	+	1090610	1093148	789624	6	73,270,276,117,33,374,	0,202,1573,1971,2533,2923,
#Deleted in new
chr6_GL000255v2_alt	1090610	1093907	chr6_GL000255v2_alt:1090610-1093907	0	+	1090610	1093148	789624	7	73,270,276,117,33,48,374,	0,202,1573,1971,2533,2708,2923,
#Deleted in new
chr6_GL000255v2_alt	1090610	1093907	chr6_GL000255v2_alt:1090610-1093907	0	+	1090610	1090610	8553170	6	73,270,276,515,33,374,	0,202,698,1573,2533,2923,
#Deleted in new
chr6_GL000255v2_alt	1114901	1115030	chr6_GL000255v2_alt:1114901-1115030	7	-	1114901	1114901	16724991	1	129,	0,
#Deleted in new
chr6_GL000255v2_alt	1144167	1145136	chr6_GL000255v2_alt:1144167-1145136	7	-	1144167	1144167	16724991	1	969,	0,
#Deleted in new
chr6_GL000255v2_alt	1144625	1147347	chr6_GL000255v2_alt:1144625-1147347	7	+	1144625	1144625	16724991	7	73,270,276,275,117,33,44,	0,197,708,1569,1946,2503,2678,
#Deleted in new
chr6_GL000255v2_alt	1153421	1154553	chr6_GL000255v2_alt:1153421-1154553	7	+	1153421	1153421	16724991	4	272,113,37,39,	0,397,908,1093,
#Deleted in new
chr6_GL000255v2_alt	1163381	1163748	chr6_GL000255v2_alt:1163381-1163748	7	+	1163381	1163381	16724991	2	135,57,	0,310,
#Deleted in new
chr6_GL000255v2_alt	1164623	1165483	chr6_GL000255v2_alt:1164623-1165483	7	-	1164623	1164623	16724991	2	158,167,	0,693,
#Deleted in new
chr6_GL000255v2_alt	1182771	1183762	chr6_GL000255v2_alt:1182771-1183762	7	-	1182771	1182771	16724991	1	991,	0,
#Deleted in new
chr6_GL000255v2_alt	1183247	1186022	chr6_GL000255v2_alt:1183247-1186022	7	+	1183247	1183247	16724991	6	72,261,275,279,117,47,	0,201,719,1591,1999,2728,
#Deleted in new
chr6_GL000255v2_alt	1189132	1189317	chr6_GL000255v2_alt:1189132-1189317	7	+	1189132	1189132	16724991	1	185,	0,
#Deleted in new
chr6_GL000255v2_alt	1196217	1200858	chr6_GL000255v2_alt:1196217-1200858	3	+	1197512	1200429	789624	10	60,131,223,270,276,276,117,33,48,434,	0,707,1145,1498,2009,2885,3260,3815,3990,4207,
#Deleted in new
chr6_GL000255v2_alt	1197033	1198026	chr6_GL000255v2_alt:1197033-1198026	7	-	1197033	1197033	16724991	1	993,	0,
#Deleted in new
chr6_GL000255v2_alt	1197203	1200858	chr6_GL000255v2_alt:1197203-1200858	1	+	1197512	1200429	789624	8	382,270,276,276,135,33,48,434,	0,512,1023,1899,2274,2829,3004,3221,
#Deleted in new
chr6_GL000255v2_alt	1197428	1200858	chr6_GL000255v2_alt:1197428-1200858	1	+	1197512	1200429	789624	8	157,270,276,276,117,33,48,434,	0,287,798,1674,2049,2604,2779,2996,
#Deleted in new
chr6_GL000255v2_alt	1197506	1200858	chr6_GL000255v2_alt:1197506-1200858	0	+	1197506	1197506	8553170	7	79,98,259,276,588,48,434,	0,209,737,1596,1971,2701,2918,
#Deleted in new
chr6_GL000255v2_alt	1197507	1200858	chr6_GL000255v2_alt:1197507-1200858	1	+	1197512	1200429	789624	5	78,270,276,276,434,	0,208,719,1595,2917,
#Deleted in new
chr6_GL000255v2_alt	1197510	1200858	chr6_GL000255v2_alt:1197510-1200858	0	+	1197510	1197510	8553170	7	75,787,276,117,29,48,434,	0,205,1592,1967,2526,2697,2914,
#Deleted in new
chr6_GL000255v2_alt	1197510	1264879	chr6_GL000255v2_alt:1197510-1264879	1	+	1197512	1200037	789624	8	75,270,276,276,117,33,94,116,	0,205,716,1592,1967,2522,67108,67253,
#Deleted in new
chr6_GL000255v2_alt	1197512	1200255	chr6_GL000255v2_alt:1197512-1200255	0	+	1197512	1197512	8553170	6	73,787,276,117,33,48,	0,203,1590,1965,2520,2695,
#Deleted in new
chr6_GL000255v2_alt	1197512	1200255	chr6_GL000255v2_alt:1197512-1200255	0	+	1197512	1197512	8553170	6	73,787,276,135,33,48,	0,203,1590,1965,2520,2695,
#Deleted in new
chr6_GL000255v2_alt	1197512	1204598	chr6_GL000255v2_alt:1197512-1204598	1	+	1197512	1200347	789624	7	73,270,276,276,117,33,4391,	0,203,714,1590,1965,2520,2695,
#Deleted in new
chr6_GL000255v2_alt	1197512	1200254	chr6_GL000255v2_alt:1197512-1200254	1	+	1197512	1200254	789624	6	73,270,276,276,33,47,	0,203,714,1590,2520,2695,
#Deleted in new
chr6_GL000255v2_alt	1211578	1213553	chr6_GL000255v2_alt:1211578-1213553	7	+	1211578	1211578	16724991	5	261,274,114,348,46,	0,843,1244,1396,1929,
#Deleted in new
chr6_GL000255v2_alt	1225783	1227447	chr6_GL000255v2_alt:1225783-1227447	7	-	1225783	1225783	16724991	3	276,281,256,	0,887,1408,
#Deleted in new
chr6_GL000255v2_alt	1230084	1233386	chr6_GL000255v2_alt:1230084-1233386	3	+	1230084	1230084	789624	3	406,64,193,	0,2545,3109,
#Deleted in new
chr6_GL000255v2_alt	1248208	1248604	chr6_GL000255v2_alt:1248208-1248604	7	+	1248208	1248208	16724991	2	122,135,	0,261,
#Deleted in new
chr6_GL000255v2_alt	1249435	1250313	chr6_GL000255v2_alt:1249435-1250313	7	-	1249435	1249435	16724991	2	165,170,	0,708,
#Deleted in new
chr6_GL000255v2_alt	1256105	1316325	chr6_GL000255v2_alt:1256105-1316325	2	-	1256105	1256105	8553170	4	1723,95,76,403,	0,20667,57187,59817,
#Deleted in new
chr6_GL000255v2_alt	1256105	1316326	chr6_GL000255v2_alt:1256105-1316326	1	-	1256105	1256105	8553170	12	1723,202,174,119,28,279,106,95,203,68,76,183,	0,2158,6215,6516,7625,7871,8704,20667,33931,34939,57187,60038,
#Deleted in new
chr6_GL000255v2_alt	1256105	1316366	chr6_GL000255v2_alt:1256105-1316366	1	-	1256105	1256105	789624	6	1723,203,68,76,255,106,	0,33931,34939,57187,59817,60155,
#Deleted in new
chr6_GL000255v2_alt	1256105	1316110	chr6_GL000255v2_alt:1256105-1316110	0	-	1256105	1256105	8553170	3	1723,76,188,	0,57187,59817,
#Deleted in new
chr6_GL000255v2_alt	1261217	1262214	chr6_GL000255v2_alt:1261217-1262214	7	-	1261217	1261217	16724991	1	997,	0,
#Deleted in new
chr6_GL000255v2_alt	1261680	1265040	chr6_GL000255v2_alt:1261680-1265040	7	+	1261680	1261680	16724991	6	87,270,275,140,48,422,	0,217,1606,2441,2723,2938,
#Deleted in new
chr6_GL000255v2_alt	1261684	1265040	chr6_GL000255v2_alt:1261684-1265040	5	+	1261684	1261684	16724991	6	83,270,275,102,140,422,	0,213,1602,1999,2437,2934,
#Deleted in new
chr6_GL000255v2_alt	1261693	1265040	chr6_GL000255v2_alt:1261693-1265040	5	+	1261693	1261693	16724991	5	74,275,140,48,422,	0,1593,2428,2710,2925,
#Deleted in new
chr6_GL000255v2_alt	1261703	1264623	chr6_GL000255v2_alt:1261703-1264623	5	+	1261703	1261703	16724991	8	64,270,276,275,102,33,48,5,	0,194,712,1583,1980,2525,2700,2915,
#Deleted in new
chr6_GL000255v2_alt	1267182	1290144	chr6_GL000255v2_alt:1267182-1290144	1	-	1267182	1267182	8553170	2	9685,108,	0,22854,
#Deleted in new
chr6_GL000255v2_alt	1274874	1316823	chr6_GL000255v2_alt:1274874-1316823	0	-	1274874	1274874	8553170	6	156,95,203,68,76,901,	0,1898,15162,16170,38418,41048,
#Deleted in new
chr6_GL000255v2_alt	1286838	1288128	chr6_GL000255v2_alt:1286838-1288128	7	+	1286838	1286838	16724991	2	435,548,	0,742,
#Deleted in new
chr6_GL000255v2_alt	1290063	1313928	chr6_GL000255v2_alt:1290063-1313928	0	-	1290063	1290063	8553170	4	176,68,76,383,	0,981,23229,23482,
#Deleted in new
chr6_GL000255v2_alt	1290558	1316371	chr6_GL000255v2_alt:1290558-1316371	1	-	1290558	1290558	8553170	4	554,627,76,449,	0,21710,22734,25364,
#Deleted in new
chr6_GL000255v2_alt	1291044	1291112	chr6_GL000255v2_alt:1291044-1291112	3	+	1291044	1291044	8553170	1	68,	0,
#Deleted in new
chr6_GL000255v2_alt	1309776	1316361	chr6_GL000255v2_alt:1309776-1316361	0	-	1309776	1309776	8553170	3	3119,76,101,	0,3516,6484,
#Deleted in new
chr6_GL000255v2_alt	1311928	1316161	chr6_GL000255v2_alt:1311928-1316161	1	-	1311928	1311928	8553170	3	967,76,2616,	0,1364,1617,
#Deleted in new
chr6_GL000255v2_alt	1313292	1313368	chr6_GL000255v2_alt:1313292-1313368	3	+	1313292	1313292	8553170	1	76,	0,
#Deleted in new
chr6_GL000255v2_alt	1314079	1320070	chr6_GL000255v2_alt:1314079-1320070	0	+	1314079	1314079	8553170	2	3437,237,	0,5754,
#Deleted in new
chr6_GL000255v2_alt	1316261	1316365	chr6_GL000255v2_alt:1316261-1316365	3	+	1316261	1316261	8553170	1	104,	0,
#Deleted in new
chr6_GL000255v2_alt	1316435	1320070	chr6_GL000255v2_alt:1316435-1320070	3	+	1316707	1319858	789624	4	417,101,110,237,	0,664,971,3398,
#Deleted in new
chr6_GL000255v2_alt	1316438	1320070	chr6_GL000255v2_alt:1316438-1320070	1	+	1316707	1319858	789624	5	133,155,101,110,237,	0,259,661,968,3395,
#Deleted in new
chr6_GL000255v2_alt	1316440	1320070	chr6_GL000255v2_alt:1316440-1320070	1	+	1316707	1319858	789624	5	141,155,101,110,237,	0,257,659,966,3393,
#Deleted in new
chr6_GL000255v2_alt	1316444	1320070	chr6_GL000255v2_alt:1316444-1320070	1	+	1316707	1319858	789624	5	152,155,101,110,237,	0,253,655,962,3389,
#Deleted in new
chr6_GL000255v2_alt	1316511	1320070	chr6_GL000255v2_alt:1316511-1320070	0	+	1316511	1316511	789624	4	70,155,110,237,	0,186,895,3322,
#Deleted in new
chr6_GL000255v2_alt	1321868	1325493	chr6_GL000255v2_alt:1321868-1325493	3	+	1323836	1324466	789624	3	301,109,1230,	0,1881,2395,
#Deleted in new
chr6_GL000255v2_alt	1322247	1325493	chr6_GL000255v2_alt:1322247-1325493	1	+	1322570	1324466	789624	3	392,109,1230,	0,1502,2016,
#Deleted in new
chr6_GL000255v2_alt	1322364	1325493	chr6_GL000255v2_alt:1322364-1325493	1	+	1323836	1324466	789624	4	275,75,109,1230,	0,1074,1385,1899,
#Deleted in new
chr6_GL000255v2_alt	1322699	1325493	chr6_GL000255v2_alt:1322699-1325493	1	+	1323836	1324466	789624	4	125,75,109,1230,	0,739,1050,1564,
#Deleted in new
chr6_GL000255v2_alt	1322735	1325493	chr6_GL000255v2_alt:1322735-1325493	1	+	1323836	1324466	789624	4	50,75,109,1230,	0,703,1014,1528,
#Deleted in new
chr6_GL000255v2_alt	1323365	1325493	chr6_GL000255v2_alt:1323365-1325493	1	+	1323836	1324466	789624	2	493,1230,	0,898,
#Deleted in new
chr6_GL000255v2_alt	1325429	1331004	chr6_GL000255v2_alt:1325429-1331004	1	-	1326265	1330944	789624	5	926,293,92,23,627,	0,1124,2882,3181,4948,
#Deleted in new
chr6_GL000255v2_alt	1325429	1331006	chr6_GL000255v2_alt:1325429-1331006	3	-	1326265	1330944	789624	4	1417,92,23,629,	0,2882,3181,4948,
#Deleted in new
chr6_GL000255v2_alt	1358043	1368247	chr6_GL000255v2_alt:1358043-1368247	3	-	1358682	1367946	0	9	893,66,75,116,23,231,96,500,43,	0,1205,2271,5156,6123,7547,8745,9486,10161,
#Deleted in new
chr6_GL000255v2_alt	1358043	1360804	chr6_GL000255v2_alt:1358043-1360804	0	-	1358043	1358043	8553170	4	349,318,66,490,	0,575,1205,2271,
#Deleted in new
chr6_GL000255v2_alt	1358043	1368031	chr6_GL000255v2_alt:1358043-1368031	0	-	1358043	1358043	789624	7	893,66,75,72,231,96,502,	0,1205,2271,5156,7547,8745,9486,
#Deleted in new
chr6_GL000255v2_alt	1358508	1365664	chr6_GL000255v2_alt:1358508-1365664	0	-	1358508	1358508	8553170	6	428,66,75,72,23,74,	0,740,1806,4691,5658,7082,
#Deleted in new
chr6_GL000255v2_alt	1359019	1363346	chr6_GL000255v2_alt:1359019-1363346	0	-	1359019	1359019	8553170	3	295,75,147,	0,1295,4180,
#Deleted in new
chr6_GL000255v2_alt	1359077	1360587	chr6_GL000255v2_alt:1359077-1360587	0	-	1359077	1359077	8553170	2	237,273,	0,1237,
#Deleted in new
chr6_GL000255v2_alt	1360342	1367327	chr6_GL000255v2_alt:1360342-1367327	0	-	1360342	1360342	8553170	6	47,116,23,231,96,107,	0,2857,3824,5248,6446,6878,
#Deleted in new
chr6_GL000255v2_alt	1360386	1369865	chr6_GL000255v2_alt:1360386-1369865	3	+	1360386	1360386	789624	4	148,125,122,154,	0,2423,6472,9325,
#Deleted in new
chr6_GL000255v2_alt	1363886	1366847	chr6_GL000255v2_alt:1363886-1366847	0	-	1363886	1363886	8553170	3	303,231,59,	0,1704,2902,
#Deleted in new
chr6_GL000255v2_alt	1366358	1367616	chr6_GL000255v2_alt:1366358-1367616	0	-	1366358	1366358	8553170	2	526,87,	0,1171,
#Deleted in new
chr6_GL000255v2_alt	1387943	1388104	chr6_GL000255v2_alt:1387943-1388104	3	-	1387943	1387943	8553170	1	161,	0,
#Deleted in new
chr6_GL000255v2_alt	1391235	1403864	chr6_GL000255v2_alt:1391235-1403864	3	+	1392164	1402941	789624	6	82,649,96,225,23,1011,	0,625,9887,10878,11413,11618,
#Deleted in new
chr6_GL000255v2_alt	1391251	1392326	chr6_GL000255v2_alt:1391251-1392326	0	+	1391251	1391251	8553170	2	475,466,	0,609,
#Deleted in new
chr6_GL000255v2_alt	1391858	1403864	chr6_GL000255v2_alt:1391858-1403864	1	+	1392164	1402941	789624	5	651,96,225,23,1011,	0,9264,10255,10790,10995,
#Deleted in new
chr6_GL000255v2_alt	1392137	1403864	chr6_GL000255v2_alt:1392137-1403864	1	+	1392164	1402941	789624	5	372,96,138,23,1011,	0,8985,10063,10511,10716,
#Deleted in new
chr6_GL000255v2_alt	1407073	1416062	chr6_GL000255v2_alt:1407073-1416062	1	-	1408816	1415986	789624	8	1827,176,33,116,23,231,96,505,	0,2366,3782,4994,5424,6453,7204,8484,
#Deleted in new
chr6_GL000255v2_alt	1407073	1416062	chr6_GL000255v2_alt:1407073-1416062	3	-	1409097	1415986	789624	7	2542,33,116,23,231,96,505,	0,3782,4994,5424,6453,7204,8484,
#Deleted in new
chr6_GL000255v2_alt	1418333	1427817	chr6_GL000255v2_alt:1418333-1427817	3	+	1419019	1427477	789624	8	860,96,231,9,14,116,33,858,	0,3970,5094,6035,6633,7295,7770,8626,
#Deleted in new
chr6_GL000255v2_alt	1418343	1427824	chr6_GL000255v2_alt:1418343-1427824	1	+	1418812	1427477	789624	7	850,96,231,23,116,33,865,	0,3960,5084,6025,7285,7760,8616,
#Deleted in new
chr6_GL000255v2_alt	1423440	1427083	chr6_GL000255v2_alt:1423440-1427083	0	+	1423440	1427083	789624	5	218,23,116,33,101,	0,928,2188,2663,3542,
#Deleted in new
chr6_GL000255v2_alt	1423484	1427824	chr6_GL000255v2_alt:1423484-1427824	0	+	1423484	1423484	8553170	6	174,23,116,33,65,124,	0,884,2144,2619,3475,4216,
#Deleted in new
chr6_GL000255v2_alt	1425440	1426225	chr6_GL000255v2_alt:1425440-1426225	0	+	1425440	1425440	8553170	2	304,122,	0,663,
#Deleted in new
chr6_GL000255v2_alt	1439550	1468468	chr6_GL000255v2_alt:1439550-1468468	1	-	1440971	1454211	789624	10	2104,33,116,23,231,96,599,104,110,62,	0,4720,4971,5566,12073,13986,14223,16592,20213,28856,
#Deleted in new
chr6_GL000255v2_alt	1439550	1459870	chr6_GL000255v2_alt:1439550-1459870	3	-	1440971	1454211	789624	9	2104,33,116,23,231,96,488,49,107,	0,4720,4971,5566,12073,13986,14223,16592,20213,
#Deleted in new
chr6_GL000255v2_alt	1439550	1468529	chr6_GL000255v2_alt:1439550-1468529	1	-	1440971	1454211	789624	9	2104,33,116,23,231,96,488,104,123,	0,4720,4971,5566,12073,13986,14223,16592,28856,
#Deleted in new
chr6_GL000255v2_alt	1439550	1445498	chr6_GL000255v2_alt:1439550-1445498	0	-	1439550	1439550	8553170	3	2104,33,977,	0,4720,4971,
#Deleted in new
chr6_GL000255v2_alt	1441893	1443718	chr6_GL000255v2_alt:1441893-1443718	7	-	1441893	1441893	16724991	2	840,363,	0,1462,
#Deleted in new
chr6_GL000255v2_alt	1451643	1468521	chr6_GL000255v2_alt:1451643-1468521	0	-	1451643	1454211	789624	6	211,96,488,104,110,115,	0,1893,2130,4499,8120,16763,
#Deleted in new
chr6_GL000255v2_alt	1453598	1468487	chr6_GL000255v2_alt:1453598-1468487	0	-	1453598	1454211	789624	3	34,488,81,	0,175,14808,
#Deleted in new
chr6_GL000255v2_alt	1453845	1468468	chr6_GL000255v2_alt:1453845-1468468	0	-	1453845	1454211	789624	3	410,110,62,	0,5918,14561,
#Deleted in new
chr6_GL000255v2_alt	1453871	1468467	chr6_GL000255v2_alt:1453871-1468467	0	-	1453871	1453871	8553170	4	227,104,110,61,	0,2271,5892,14535,
#Deleted in new
chr6_GL000255v2_alt	1489134	1489573	chr6_GL000255v2_alt:1489134-1489573	0	-	1489134	1489134	8553170	2	230,120,	0,319,
#Deleted in new
chr6_GL000255v2_alt	1489134	1581209	chr6_GL000255v2_alt:1489134-1581209	3	-	1489134	1489134	789624	5	230,93,165,118,126,	0,319,8106,20306,91949,
#Deleted in new
chr6_GL000255v2_alt	1493396	1497373	chr6_GL000255v2_alt:1493396-1497373	7	+	1493396	1493396	16724991	3	405,96,252,	0,3373,3725,
#Deleted in new
chr6_GL000255v2_alt	1514691	1522009	chr6_GL000255v2_alt:1514691-1522009	7	+	1514691	1514691	16724991	7	101,158,211,276,117,48,3639,	0,330,800,1607,1990,2698,3679,
#Deleted in new
chr6_GL000255v2_alt	1514709	1517430	chr6_GL000255v2_alt:1514709-1517430	5	+	1514709	1514709	16724991	6	83,270,280,276,117,41,	0,200,713,1589,1972,2680,
#Deleted in new
chr6_GL000255v2_alt	1545886	1581462	chr6_GL000255v2_alt:1545886-1581462	0	-	1545886	1545886	8553170	4	1806,494,106,34,	0,3677,5338,35542,
#Deleted in new
chr6_GL000255v2_alt	1546098	1581461	chr6_GL000255v2_alt:1546098-1581461	0	-	1546098	1546098	8553170	4	1594,494,106,236,	0,3465,5126,35127,
#Deleted in new
chr6_GL000255v2_alt	1546098	1581421	chr6_GL000255v2_alt:1546098-1581421	0	-	1546098	1546098	8553170	3	3959,106,196,	0,5126,35127,
#Deleted in new
chr6_GL000255v2_alt	1546098	1581972	chr6_GL000255v2_alt:1546098-1581972	0	-	1546098	1546098	8553170	4	3959,106,214,38,	0,5126,23242,35836,
#Deleted in new
chr6_GL000255v2_alt	1546098	1582225	chr6_GL000255v2_alt:1546098-1582225	3	-	1546098	1546098	789624	3	3959,106,797,	0,5126,35330,
#Deleted in new
chr6_GL000255v2_alt	1546098	1581926	chr6_GL000255v2_alt:1546098-1581926	0	-	1546098	1546098	789624	5	1594,494,106,214,498,	0,3465,5126,23242,35330,
#Deleted in new
chr6_GL000255v2_alt	1546098	1581451	chr6_GL000255v2_alt:1546098-1581451	0	-	1546098	1546098	8553170	3	3959,106,368,	0,5126,34985,
#Deleted in new
chr6_GL000255v2_alt	1546098	1581409	chr6_GL000255v2_alt:1546098-1581409	0	-	1546098	1546098	8553170	4	3959,106,214,326,	0,5126,23242,34985,
#Deleted in new
chr6_GL000255v2_alt	1581553	1584827	chr6_GL000255v2_alt:1581553-1584827	0	+	1584393	1584827	789624	3	409,153,441,	0,2411,2833,
#Deleted in new
chr6_GL000255v2_alt	1581909	1584615	chr6_GL000255v2_alt:1581909-1584615	2	+	1584393	1584615	789624	4	161,45,153,229,	0,817,2055,2477,
#Deleted in new
chr6_GL000255v2_alt	1581918	1598811	chr6_GL000255v2_alt:1581918-1598811	1	+	1584393	1597341	0	8	152,153,460,96,231,23,116,2018,	0,2046,2468,3938,8908,13071,13668,14875,
#Deleted in new
chr6_GL000255v2_alt	1581918	1598810	chr6_GL000255v2_alt:1581918-1598810	1	+	1584393	1597341	0	9	152,153,460,96,231,23,90,116,2017,	0,2046,2468,3938,8908,13071,13435,13668,14875,
#Deleted in new
chr6_GL000255v2_alt	1581979	1591059	chr6_GL000255v2_alt:1581979-1591059	0	+	1584393	1591059	789624	5	91,133,460,96,233,	0,2005,2407,3877,8847,
#Deleted in new
chr6_GL000255v2_alt	1581994	1598811	chr6_GL000255v2_alt:1581994-1598811	1	+	1584393	1597341	0	9	76,45,133,460,96,231,23,116,2018,	0,732,1990,2392,3862,8832,12995,13592,14799,
#Deleted in new
chr6_GL000255v2_alt	1582031	1584571	chr6_GL000255v2_alt:1582031-1584571	0	+	1584393	1584571	789624	4	39,50,153,185,	0,690,1933,2355,
#Deleted in new
chr6_GL000255v2_alt	1582333	1598811	chr6_GL000255v2_alt:1582333-1598811	1	+	1584393	1597341	0	8	438,153,460,96,231,23,116,2018,	0,1631,2053,3523,8493,12656,13253,14460,
#Deleted in new
chr6_GL000255v2_alt	1582597	1584538	chr6_GL000255v2_alt:1582597-1584538	0	+	1584393	1584538	789624	3	174,133,152,	0,1387,1789,
#Deleted in new
chr6_GL000255v2_alt	1583964	1598811	chr6_GL000255v2_alt:1583964-1598811	1	+	1584393	1597341	0	8	153,460,96,231,23,90,116,2018,	0,422,1892,6862,11025,11389,11622,12829,
#Deleted in new
chr6_GL000255v2_alt	1584386	1601940	chr6_GL000255v2_alt:1584386-1601940	3	+	1584393	1601892	789624	10	460,96,231,23,116,185,101,83,126,146,	0,1470,6440,10603,11200,12407,15993,16186,17127,17408,
#Deleted in new
chr6_GL000255v2_alt	1584604	1596552	chr6_GL000255v2_alt:1584604-1596552	0	+	1584604	1596527	789624	6	242,96,231,23,34,82,	0,1252,6222,10385,10982,11866,
#Deleted in new
chr6_GL000255v2_alt	1600212	1601939	chr6_GL000255v2_alt:1600212-1601939	1	+	1600253	1601892	789624	5	98,101,107,126,145,	0,167,336,1301,1582,
#Deleted in new
chr6_GL000255v2_alt	1600215	1601575	chr6_GL000255v2_alt:1600215-1601575	0	+	1600215	1600215	8553170	4	95,77,439,62,	0,188,357,1298,
#Deleted in new
chr6_GL000255v2_alt	1600223	1601939	chr6_GL000255v2_alt:1600223-1601939	0	+	1600223	1600223	8553170	3	87,1260,145,	0,156,1571,
#Deleted in new
chr6_GL000255v2_alt	1600232	1601939	chr6_GL000255v2_alt:1600232-1601939	0	+	1600232	1600232	8553170	4	78,101,126,145,	0,147,1281,1562,
#Deleted in new
chr6_GL000255v2_alt	1600234	1601966	chr6_GL000255v2_alt:1600234-1601966	0	+	1600234	1600234	8553170	4	76,83,126,172,	0,338,1279,1560,
#Deleted in new
chr6_GL000255v2_alt	1600236	1601939	chr6_GL000255v2_alt:1600236-1601939	0	+	1600236	1600236	8553170	4	74,276,126,145,	0,143,1277,1558,
#Deleted in new
chr6_GL000255v2_alt	1600240	1601939	chr6_GL000255v2_alt:1600240-1601939	1	+	1600253	1601892	789624	4	240,83,126,145,	0,332,1273,1554,
#Deleted in new
chr6_GL000255v2_alt	1600240	1601939	chr6_GL000255v2_alt:1600240-1601939	1	+	1600253	1601892	789624	5	70,101,83,126,145,	0,139,332,1273,1554,
#Deleted in new
chr6_GL000255v2_alt	1600250	1601939	chr6_GL000255v2_alt:1600250-1601939	1	+	1600253	1601855	789624	5	60,101,83,133,145,	0,129,322,1263,1544,
#Deleted in new
chr6_GL000255v2_alt	1606497	1606632	chr6_GL000255v2_alt:1606497-1606632	7	+	1606497	1606497	16724991	1	135,	0,
#Deleted in new
chr6_GL000255v2_alt	1614359	1614993	chr6_GL000255v2_alt:1614359-1614993	7	-	1614359	1614359	16724991	1	634,	0,
#Deleted in new
chr6_GL000255v2_alt	1618189	1619358	chr6_GL000255v2_alt:1618189-1619358	7	-	1618189	1618189	16724991	1	1169,	0,
#Deleted in new
chr6_GL000255v2_alt	1669799	1674405	chr6_GL000255v2_alt:1669799-1674405	7	+	1669799	1669799	16724991	5	251,286,271,131,116,	0,517,1404,1791,4490,
#Deleted in new
chr6_GL000255v2_alt	1721633	1723163	chr6_GL000255v2_alt:1721633-1723163	7	+	1721633	1721633	16724991	2	414,853,	0,677,
#Deleted in new
chr6_GL000255v2_alt	1723981	1725351	chr6_GL000255v2_alt:1723981-1725351	7	+	1723981	1723981	16724991	1	1370,	0,
#Deleted in new
chr6_GL000255v2_alt	1741038	1741689	chr6_GL000255v2_alt:1741038-1741689	7	+	1741038	1741038	16724991	1	651,	0,
#Deleted in new
chr6_GL000255v2_alt	1744562	1749301	chr6_GL000255v2_alt:1744562-1749301	3	+	1744627	1747677	0	8	129,270,276,276,117,33,43,1457,	0,259,773,1670,2070,2937,3074,3282,
#Deleted in new
chr6_GL000255v2_alt	1744605	1745461	chr6_GL000255v2_alt:1744605-1745461	0	+	1744605	1744605	8553170	2	86,640,	0,216,
#Deleted in new
chr6_GL000255v2_alt	1744607	1746379	chr6_GL000255v2_alt:1744607-1746379	0	+	1744607	1744607	8553170	3	484,276,147,	0,728,1625,
#Deleted in new
chr6_GL000255v2_alt	1771352	1774307	chr6_GL000255v2_alt:1771352-1774307	3	+	1771352	1771352	8553170	2	346,505,	0,2450,
#Deleted in new
chr6_GL000255v2_alt	1796460	1812259	chr6_GL000255v2_alt:1796460-1812259	3	-	1801155	1811288	789624	12	4937,141,163,179,195,96,208,72,152,137,166,1044,	0,5319,5735,5975,11091,11708,11974,13199,13388,13679,14179,14755,
#Deleted in new
chr6_GL000255v2_alt	1801568	1807631	chr6_GL000255v2_alt:1801568-1807631	0	-	1801568	1801568	8553170	4	352,163,179,80,	0,627,867,5983,
#Deleted in new
chr6_GL000255v2_alt	1802279	1802901	chr6_GL000255v2_alt:1802279-1802901	0	-	1802279	1802279	8553170	2	79,466,	0,156,
#Deleted in new
chr6_GL000255v2_alt	1807261	1808205	chr6_GL000255v2_alt:1807261-1808205	0	-	1807261	1807261	8553170	2	485,37,	0,907,
#Deleted in new
chr6_GL000255v2_alt	1808443	1811173	chr6_GL000255v2_alt:1808443-1811173	0	-	1808443	1810872	789624	5	199,72,152,137,534,	0,1216,1405,1696,2196,
#Deleted in new
chr6_GL000255v2_alt	1811970	1818808	chr6_GL000255v2_alt:1811970-1818808	1	+	1812429	1817580	789624	4	565,63,291,1335,	0,1264,4948,5503,
#Deleted in new
chr6_GL000255v2_alt	1812364	1818808	chr6_GL000255v2_alt:1812364-1818808	3	+	1812429	1817580	789624	3	171,291,1335,	0,4554,5109,
#Deleted in new
chr6_GL000255v2_alt	1812398	1818808	chr6_GL000255v2_alt:1812398-1818808	0	+	1812398	1812398	8553170	4	137,181,291,1335,	0,4014,4520,5075,
#Deleted in new
chr6_GL000255v2_alt	1812400	1818808	chr6_GL000255v2_alt:1812400-1818808	0	+	1812400	1812400	8553170	5	135,63,181,291,1335,	0,834,4012,4518,5073,
#Deleted in new
chr6_GL000255v2_alt	1812431	1813521	chr6_GL000255v2_alt:1812431-1813521	0	+	1812431	1812431	8553170	2	104,287,	0,803,
#Deleted in new
chr6_GL000255v2_alt	1815115	1818808	chr6_GL000255v2_alt:1815115-1818808	0	+	1815115	1815115	8553170	2	2094,1335,	0,2358,
#Deleted in new
chr6_GL000255v2_alt	1826462	1846514	chr6_GL000255v2_alt:1826462-1846514	1	+	1826574	1845783	789624	25	185,47,96,127,38,108,75,114,114,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,898,	0,6035,6444,6702,6974,7096,8557,9031,11020,11692,12234,12431,12818,13044,13886,14184,14505,14760,15100,15267,18307,18425,18768,18925,19154,
#Deleted in new
chr6_GL000255v2_alt	1826479	1846514	chr6_GL000255v2_alt:1826479-1846514	1	+	1826574	1845783	789624	24	168,47,96,127,38,108,75,114,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,898,	0,6018,6427,6685,6957,7079,8540,9014,11675,12217,12414,12801,13027,13869,14167,14488,14743,15083,15250,18290,18408,18751,18908,19137,
#Deleted in new
chr6_GL000255v2_alt	1826519	1838797	chr6_GL000255v2_alt:1826519-1838797	0	+	1826574	1838797	789624	11	128,47,96,130,38,108,75,114,114,123,101,	0,5978,6387,6642,6917,7039,8500,8974,10963,11635,12177,
#Deleted in new
chr6_GL000255v2_alt	1826528	1835536	chr6_GL000255v2_alt:1826528-1835536	0	+	1826528	1826528	8553170	7	119,96,127,38,108,75,43,	0,6378,6636,6908,7030,8491,8965,
#Deleted in new
chr6_GL000255v2_alt	1826538	1846514	chr6_GL000255v2_alt:1826538-1846514	3	+	1826574	1845783	789624	8	109,47,96,99,97,65,73,898,	0,5959,6368,6626,18421,18692,18849,19078,
#Deleted in new
chr6_GL000255v2_alt	1837553	1852267	chr6_GL000255v2_alt:1837553-1852267	0	+	1837553	1837553	8553170	18	43,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,628,612,	0,601,1143,1340,1727,1953,2795,3093,3414,3669,4009,4176,7216,7334,7677,7834,8063,14102,
#Deleted in new
chr6_GL000255v2_alt	1844510	1845826	chr6_GL000255v2_alt:1844510-1845826	0	+	1844510	1844510	8553170	4	546,65,73,210,	0,720,877,1106,
#Deleted in new
chr6_GL000255v2_alt	1855488	1872332	chr6_GL000255v2_alt:1855488-1872332	3	-	1856637	1865032	789624	20	1259,756,114,76,195,64,247,159,148,101,113,106,174,78,52,136,87,118,521,21,	0,1536,2446,2810,3072,3380,3608,3953,4188,4594,5522,5737,6067,6378,7439,8378,8676,9437,16077,16823,
#Deleted in new
chr6_GL000255v2_alt	1858661	1859301	chr6_GL000255v2_alt:1858661-1859301	0	-	1858661	1858661	8553170	2	271,205,	0,435,
#Deleted in new
chr6_GL000255v2_alt	1859700	1861086	chr6_GL000255v2_alt:1859700-1861086	0	-	1859700	1859700	8553170	2	483,76,	0,1310,
#Deleted in new
chr6_GL000255v2_alt	1860106	1861825	chr6_GL000255v2_alt:1860106-1861825	0	-	1860106	1860106	8553170	4	77,113,106,270,	0,904,1119,1449,
#Deleted in new
chr6_GL000255v2_alt	1860897	1861331	chr6_GL000255v2_alt:1860897-1861331	0	-	1860897	1860897	8553170	2	226,106,	0,328,
#Deleted in new
chr6_GL000255v2_alt	1865034	1872332	chr6_GL000255v2_alt:1865034-1872332	0	-	1865034	1865034	8553170	4	9,54,521,21,	0,4602,6531,7277,
#Deleted in new
chr6_GL000255v2_alt	1871669	1873700	chr6_GL000255v2_alt:1871669-1873700	0	-	1871669	1871669	8553170	2	417,55,	0,1976,
#Deleted in new
chr6_GL000255v2_alt	1872796	1881483	chr6_GL000255v2_alt:1872796-1881483	1	+	1872953	1880885	0	7	235,109,98,69,67,60,894,	0,1784,2000,2212,5123,7174,7793,
#Deleted in new
chr6_GL000255v2_alt	1872930	1875212	chr6_GL000255v2_alt:1872930-1875212	0	+	1872930	1872930	8553170	4	101,109,98,204,	0,1650,1866,2078,
#Deleted in new
chr6_GL000255v2_alt	1872939	1881483	chr6_GL000255v2_alt:1872939-1881483	0	+	1872939	1872939	8553170	5	92,497,67,60,894,	0,1641,4980,7031,7650,
#Deleted in new
chr6_GL000255v2_alt	1872947	1881483	chr6_GL000255v2_alt:1872947-1881483	3	+	1872953	1880885	789624	5	84,109,98,67,894,	0,1633,1849,4972,7642,
#Deleted in new
chr6_GL000255v2_alt	1872947	1881483	chr6_GL000255v2_alt:1872947-1881483	0	+	1872947	1872947	8553170	7	84,109,126,69,67,60,894,	0,1633,1821,2061,4972,7023,7642,
#Deleted in new
chr6_GL000255v2_alt	1881929	1899767	chr6_GL000255v2_alt:1881929-1899767	1	+	1881973	1898103	0	9	151,61,92,61,114,102,46,72,1912,	0,618,794,1009,1190,1487,13535,15334,15926,
#Deleted in new
chr6_GL000255v2_alt	1881943	1901911	chr6_GL000255v2_alt:1881943-1901911	1	+	1881973	1901731	0	13	137,61,92,61,114,102,46,69,72,244,80,43,355,	0,604,780,995,1176,1473,13521,13679,15320,15912,19039,19211,19613,
#Deleted in new
chr6_GL000255v2_alt	1881962	1899767	chr6_GL000255v2_alt:1881962-1899767	1	+	1881973	1898650	0	10	118,61,92,61,114,102,46,72,244,1151,	0,585,761,976,1157,1454,13502,15301,15893,16654,
#Deleted in new
chr6_GL000255v2_alt	1881963	1899767	chr6_GL000255v2_alt:1881963-1899767	1	+	1881973	1898103	0	10	117,61,92,61,114,102,46,69,72,1912,	0,584,760,975,1156,1453,13501,13659,15300,15892,
#Deleted in new
chr6_GL000255v2_alt	1881973	1901911	chr6_GL000255v2_alt:1881973-1901911	1	+	1882291	1901731	0	13	389,61,92,61,114,102,46,69,72,244,80,43,355,	0,574,750,965,1146,1443,13491,13649,15290,15882,19009,19181,19583,
#Deleted in new
chr6_GL000255v2_alt	1881973	1899767	chr6_GL000255v2_alt:1881973-1899767	0	+	1881973	1898650	0	11	107,61,92,61,114,102,46,69,72,244,1151,	0,574,750,965,1146,1443,13491,13649,15290,15882,16643,
#Deleted in new
chr6_GL000255v2_alt	1881980	1901911	chr6_GL000255v2_alt:1881980-1901911	0	+	1881980	1881980	8553170	12	100,61,92,61,114,102,46,69,72,80,43,355,	0,567,743,958,1139,1436,13484,13642,15283,19002,19174,19576,
#Deleted in new
chr6_GL000255v2_alt	1882002	1895786	chr6_GL000255v2_alt:1882002-1895786	0	+	1882002	1882002	8553170	8	78,61,92,61,114,102,46,164,	0,545,721,936,1117,1414,13462,13620,
#Deleted in new
chr6_GL000255v2_alt	1882007	1901911	chr6_GL000255v2_alt:1882007-1901911	0	+	1882007	1882007	789624	11	73,61,92,61,114,102,46,69,72,80,757,	0,540,716,931,1112,1409,13457,13615,15256,18975,19147,
#Deleted in new
chr6_GL000255v2_alt	1883487	1901490	chr6_GL000255v2_alt:1883487-1901490	0	+	1883487	1883487	8553170	6	31,46,72,80,43,128,	0,11977,13776,17495,17667,17875,
#Deleted in new
chr6_GL000255v2_alt	1888716	1888986	chr6_GL000255v2_alt:1888716-1888986	7	+	1888716	1888716	16724991	1	270,	0,
#Deleted in new
chr6_GL000255v2_alt	1896909	1901911	chr6_GL000255v2_alt:1896909-1901911	2	+	1896909	1896909	8553170	4	49,72,215,355,	0,354,4073,4647,
#Deleted in new
chr6_GL000255v2_alt	1898006	1901911	chr6_GL000255v2_alt:1898006-1901911	0	+	1898006	1898006	8553170	3	93,79,757,	0,2977,3148,
#Deleted in new
chr6_GL000255v2_alt	1902126	1906373	chr6_GL000255v2_alt:1902126-1906373	0	+	1902126	1902126	8553170	4	265,209,89,20,	0,2712,3955,4227,
#Deleted in new
chr6_GL000255v2_alt	1902142	1908191	chr6_GL000255v2_alt:1902142-1908191	0	+	1902142	1902142	8553170	6	249,402,107,201,70,308,	0,2503,3939,4211,5587,5741,
#Deleted in new
chr6_GL000255v2_alt	1902160	1908191	chr6_GL000255v2_alt:1902160-1908191	3	+	1902319	1907997	789624	6	231,402,89,201,70,308,	0,2485,3921,4193,5569,5723,
#Deleted in new
chr6_GL000255v2_alt	1902213	1907795	chr6_GL000255v2_alt:1902213-1907795	0	+	1902213	1902213	8553170	3	178,201,66,	0,4140,5516,
#Deleted in new
chr6_GL000255v2_alt	1902251	1908191	chr6_GL000255v2_alt:1902251-1908191	1	+	1902319	1907997	789624	5	140,89,201,70,308,	0,3830,4102,5478,5632,
#Deleted in new
chr6_GL000255v2_alt	1902273	1905001	chr6_GL000255v2_alt:1902273-1905001	0	+	1902273	1902273	8553170	3	118,241,356,	0,420,2372,
#Deleted in new
chr6_GL000255v2_alt	1902508	1908191	chr6_GL000255v2_alt:1902508-1908191	0	+	1902508	1907997	789624	6	426,402,89,201,70,308,	0,2137,3573,3845,5221,5375,
#Deleted in new
chr6_GL000255v2_alt	1906094	1908191	chr6_GL000255v2_alt:1906094-1908191	0	+	1906094	1906094	8553170	3	76,201,462,	0,259,1635,
#Deleted in new
chr6_GL000255v2_alt	1908200	1917096	chr6_GL000255v2_alt:1908200-1917096	1	-	1908323	1916969	789624	12	252,174,162,163,68,119,163,141,153,99,211,228,	0,1618,2087,2347,3110,3303,3509,3864,6384,6648,6944,8668,
#Deleted in new
chr6_GL000255v2_alt	1908200	1928150	chr6_GL000255v2_alt:1908200-1928150	3	-	1908323	1927954	789624	20	252,174,162,163,68,119,163,141,153,99,211,116,111,192,204,255,57,163,239,403,	0,1618,2087,2347,3110,3303,3509,3864,6384,6648,6944,9539,9823,11713,11983,12391,17322,17702,17948,19547,
#Deleted in new
chr6_GL000255v2_alt	1914585	1915690	chr6_GL000255v2_alt:1914585-1915690	0	-	1914585	1914585	8553170	3	152,99,546,	0,263,559,
#Deleted in new
chr6_GL000255v2_alt	1920242	1928101	chr6_GL000255v2_alt:1920242-1928101	0	-	1920242	1928095	789624	6	145,255,57,163,239,33,	0,349,5280,5660,5906,7826,
#Deleted in new
chr6_GL000255v2_alt	1931502	1942330	chr6_GL000255v2_alt:1931502-1942330	1	-	1932382	1941132	789624	4	900,211,1639,103,	0,2790,8019,10725,
#Deleted in new
chr6_GL000255v2_alt	1931502	1943009	chr6_GL000255v2_alt:1931502-1943009	3	-	1932382	1941132	789624	3	900,211,3488,	0,2790,8019,
#Deleted in new
chr6_GL000255v2_alt	1931502	1942307	chr6_GL000255v2_alt:1931502-1942307	0	-	1931502	1931502	8553170	4	900,211,137,80,	0,2790,8019,10725,
#Deleted in new
chr6_GL000255v2_alt	1931502	1942272	chr6_GL000255v2_alt:1931502-1942272	0	-	1931502	1931502	8553170	3	900,211,45,	0,2790,10725,
#Deleted in new
chr6_GL000255v2_alt	1943160	1946090	chr6_GL000255v2_alt:1943160-1946090	1	-	1943774	1946088	789624	3	896,197,135,	0,2000,2795,
#Deleted in new
chr6_GL000255v2_alt	1943160	1946534	chr6_GL000255v2_alt:1943160-1946534	3	-	1943774	1946088	789624	5	896,177,197,440,45,	0,1229,2000,2795,3329,
#Deleted in new
chr6_GL000255v2_alt	1943160	1945837	chr6_GL000255v2_alt:1943160-1945837	0	-	1943774	1945837	789624	4	896,177,197,131,	0,1229,2000,2546,
#Deleted in new
chr6_GL000255v2_alt	1943160	1946116	chr6_GL000255v2_alt:1943160-1946116	0	-	1943160	1943160	789624	4	896,177,219,161,	0,1229,1978,2795,
#Deleted in new
chr6_GL000255v2_alt	1943160	1946088	chr6_GL000255v2_alt:1943160-1946088	0	-	1943160	1943160	8553170	2	896,133,	0,2795,
#Deleted in new
chr6_GL000255v2_alt	1943160	1946100	chr6_GL000255v2_alt:1943160-1946100	0	-	1943160	1943160	8553170	3	896,219,145,	0,1978,2795,
#Deleted in new
chr6_GL000255v2_alt	1943160	1945467	chr6_GL000255v2_alt:1943160-1945467	0	-	1943160	1943160	8553170	2	896,307,	0,2000,
#Deleted in new
chr6_GL000255v2_alt	1943160	1946081	chr6_GL000255v2_alt:1943160-1946081	0	-	1943160	1943160	789624	3	896,177,126,	0,1229,2795,
#Deleted in new
chr6_GL000255v2_alt	1943163	1946422	chr6_GL000255v2_alt:1943163-1946422	1	-	1943774	1946088	789624	4	893,177,197,467,	0,1226,1997,2792,
#Deleted in new
chr6_GL000255v2_alt	1951918	1952648	chr6_GL000255v2_alt:1951918-1952648	7	-	1951918	1951918	16724991	1	730,	0,
#Deleted in new
chr6_GL000255v2_alt	1954919	1973001	chr6_GL000255v2_alt:1954919-1973001	3	-	1955577	1970287	0	15	826,111,126,183,120,2478,71,792,93,60,1481,70,381,139,645,	0,2747,2946,3298,3612,3815,7576,7758,11604,11859,12066,13840,13995,15232,17437,
#Deleted in new
chr6_GL000255v2_alt	1958180	1968296	chr6_GL000255v2_alt:1958180-1968296	3	+	1958180	1958180	789624	3	127,114,497,	0,9243,9619,
#Deleted in new
chr6_GL000255v2_alt	1960561	1967026	chr6_GL000255v2_alt:1960561-1967026	0	-	1960561	1967026	789624	5	651,71,93,60,41,	0,1934,5962,6217,6424,
#Deleted in new
chr6_GL000255v2_alt	1960695	1962797	chr6_GL000255v2_alt:1960695-1962797	0	-	1960695	1960695	8553170	2	517,302,	0,1800,
#Deleted in new
chr6_GL000255v2_alt	1966583	1967043	chr6_GL000255v2_alt:1966583-1967043	0	-	1966583	1966583	8553170	3	30,60,58,	0,195,402,
#Deleted in new
chr6_GL000255v2_alt	1968319	1972187	chr6_GL000255v2_alt:1968319-1972187	1	-	1968816	1970287	789624	7	147,70,20,107,153,139,194,	0,440,595,618,823,1832,3674,
#Deleted in new
chr6_GL000255v2_alt	1968944	1972287	chr6_GL000255v2_alt:1968944-1972287	0	-	1968944	1970287	789624	3	351,139,92,	0,1207,3251,
#Deleted in new
chr6_GL000255v2_alt	1969051	1972559	chr6_GL000255v2_alt:1969051-1972559	0	-	1969051	1970287	789624	3	244,139,199,	0,1100,3309,
#Deleted in new
chr6_GL000255v2_alt	1969091	1972233	chr6_GL000255v2_alt:1969091-1972233	0	-	1969091	1970287	789624	3	204,139,240,	0,1060,2902,
#Deleted in new
chr6_GL000255v2_alt	1975312	1980539	chr6_GL000255v2_alt:1975312-1980539	1	+	1975618	1979509	0	4	363,109,111,2088,	0,2336,2717,3139,
#Deleted in new
chr6_GL000255v2_alt	1976685	1980539	chr6_GL000255v2_alt:1976685-1980539	1	+	1978079	1979509	789624	4	325,109,111,2088,	0,963,1344,1766,
#Deleted in new
chr6_GL000255v2_alt	1976778	1980539	chr6_GL000255v2_alt:1976778-1980539	1	+	1977371	1979509	789624	4	596,109,111,2088,	0,870,1251,1673,
#Deleted in new
chr6_GL000255v2_alt	1976810	1980539	chr6_GL000255v2_alt:1976810-1980539	3	+	1978079	1979509	789624	4	516,109,111,2088,	0,838,1219,1641,
#Deleted in new
chr6_GL000255v2_alt	1982821	1997843	chr6_GL000255v2_alt:1982821-1997843	3	-	1983228	1997299	789624	13	437,165,138,46,182,153,96,120,144,91,76,57,207,	0,2314,2720,2974,3211,12446,12784,12967,13478,13902,14080,14435,14815,
#Deleted in new
chr6_GL000255v2_alt	1982821	1995963	chr6_GL000255v2_alt:1982821-1995963	0	-	1982821	1982821	8553170	7	437,165,138,419,153,96,175,	0,2314,2720,2974,12446,12784,12967,
#Deleted in new
chr6_GL000255v2_alt	1986032	1997417	chr6_GL000255v2_alt:1986032-1997417	0	-	1986032	1997277	789624	6	182,153,96,120,144,161,	0,9235,9573,9756,10267,11224,
#Deleted in new
chr6_GL000255v2_alt	1986104	1995904	chr6_GL000255v2_alt:1986104-1995904	0	-	1986104	1986104	8553170	3	110,153,299,	0,9163,9501,
#Deleted in new
chr6_GL000255v2_alt	1986180	1997610	chr6_GL000255v2_alt:1986180-1997610	0	-	1986180	1997299	789624	9	34,153,96,120,144,91,76,57,117,	0,9087,9425,9608,10119,10543,10721,11076,11313,
#Deleted in new
chr6_GL000255v2_alt	1991420	1991531	chr6_GL000255v2_alt:1991420-1991531	3	-	1991420	1991420	8553170	1	111,	0,
#Deleted in new
chr6_GL000255v2_alt	1995267	1997842	chr6_GL000255v2_alt:1995267-1997842	0	-	1995267	1995267	8553170	7	153,96,120,144,76,57,206,	0,338,521,1032,1634,1989,2369,
#Deleted in new
chr6_GL000255v2_alt	1995270	1997467	chr6_GL000255v2_alt:1995270-1997467	0	-	1995270	1997445	789624	3	150,96,211,	0,335,1986,
#Deleted in new
chr6_GL000255v2_alt	1995285	1997386	chr6_GL000255v2_alt:1995285-1997386	0	-	1995285	1997299	789624	7	135,96,120,144,91,76,130,	0,320,503,1014,1438,1616,1971,
#Deleted in new
chr6_GL000255v2_alt	1995363	1997816	chr6_GL000255v2_alt:1995363-1997816	0	-	1995363	1995363	8553170	7	57,96,120,515,76,57,180,	0,242,425,936,1538,1893,2273,
#Deleted in new
chr6_GL000255v2_alt	1995364	1997313	chr6_GL000255v2_alt:1995364-1997313	0	-	1995364	1997299	789624	7	56,96,120,144,43,76,57,	0,241,424,935,1407,1537,1892,
#Deleted in new
chr6_GL000255v2_alt	1995618	1997634	chr6_GL000255v2_alt:1995618-1997634	0	-	1995618	1997299	789624	7	83,120,144,91,76,57,58,	0,170,681,1105,1283,1638,1958,
#Deleted in new
chr6_GL000255v2_alt	1996463	1997787	chr6_GL000255v2_alt:1996463-1997787	0	-	1996463	1996463	8553170	2	850,151,	0,1173,
#Deleted in new
chr6_GL000255v2_alt	1998308	1999664	chr6_GL000255v2_alt:1998308-1999664	1	-	1999045	1999628	789624	2	998,246,	0,1110,
#Deleted in new
chr6_GL000255v2_alt	1998308	1999658	chr6_GL000255v2_alt:1998308-1999658	3	-	1999211	1999628	789624	1	1350,	0,
#Deleted in new
chr6_GL000255v2_alt	2006129	2006381	chr6_GL000255v2_alt:2006129-2006381	3	+	2006129	2006129	8553170	1	252,	0,
#Deleted in new
chr6_GL000255v2_alt	2021917	2047334	chr6_GL000255v2_alt:2021917-2047334	3	+	2021917	2021917	8553170	4	127,182,68,825,	0,21857,24055,24592,
#Deleted in new
chr6_GL000255v2_alt	2037042	2047334	chr6_GL000255v2_alt:2037042-2047334	0	+	2037042	2037042	8553170	3	169,182,825,	0,6732,9467,
#Deleted in new
chr6_GL000255v2_alt	2053739	2085765	chr6_GL000255v2_alt:2053739-2085765	0	-	2053739	2053739	8553170	2	119,145,	0,31881,
#Deleted in new
chr6_GL000255v2_alt	2067966	2085765	chr6_GL000255v2_alt:2067966-2085765	3	-	2067966	2067966	789624	2	1911,145,	0,17654,
#Deleted in new
chr6_GL000255v2_alt	2094624	2103263	chr6_GL000255v2_alt:2094624-2103263	3	-	2094624	2094624	789624	3	494,113,192,	0,7517,8447,
#Deleted in new
chr6_GL000255v2_alt	2119425	2119728	chr6_GL000255v2_alt:2119425-2119728	3	+	2119425	2119425	8553170	1	303,	0,
#Deleted in new
chr6_GL000255v2_alt	2122155	2131089	chr6_GL000255v2_alt:2122155-2131089	3	-	2122155	2122155	8553170	2	2846,1141,	0,7793,
#Deleted in new
chr6_GL000255v2_alt	2136142	2147365	chr6_GL000255v2_alt:2136142-2147365	0	+	2136142	2136142	8553170	7	151,127,103,229,148,100,194,	0,7713,7933,8227,9998,10405,11029,
#Deleted in new
chr6_GL000255v2_alt	2136195	2155326	chr6_GL000255v2_alt:2136195-2155326	1	+	2143897	2154466	0	20	98,173,56,127,103,229,148,100,187,247,96,152,166,111,245,128,219,235,150,1001,	0,3510,4597,7660,7880,8174,9945,10352,10976,11270,12042,12246,13480,14378,15595,15988,16353,17047,17862,18130,
#Deleted in new
chr6_GL000255v2_alt	2136462	2139875	chr6_GL000255v2_alt:2136462-2139875	0	+	2136462	2136462	8553170	2	76,170,	0,3243,
#Deleted in new
chr6_GL000255v2_alt	2138113	2146223	chr6_GL000255v2_alt:2138113-2146223	0	+	2143897	2146223	789624	5	38,127,103,229,83,	0,5742,5962,6256,8027,
#Deleted in new
chr6_GL000255v2_alt	2138258	2146166	chr6_GL000255v2_alt:2138258-2146166	0	+	2143897	2146166	789624	5	75,127,103,229,26,	0,5597,5817,6111,7882,
#Deleted in new
chr6_GL000255v2_alt	2138946	2155326	chr6_GL000255v2_alt:2138946-2155326	1	+	2143897	2154466	0	19	151,173,127,103,229,148,100,187,247,96,152,166,111,245,128,219,235,150,1001,	0,759,4909,5129,5423,7194,7601,8225,8519,9291,9495,10729,11627,12844,13237,13602,14296,15111,15379,
#Deleted in new
chr6_GL000255v2_alt	2139230	2155326	chr6_GL000255v2_alt:2139230-2155326	1	+	2143897	2154466	0	19	83,173,56,127,103,229,148,100,187,247,96,152,166,245,128,219,235,150,1001,	0,475,1562,4625,4845,5139,6910,7317,7941,8235,9007,9211,10445,12560,12953,13318,14012,14827,15095,
#Deleted in new
chr6_GL000255v2_alt	2139520	2144598	chr6_GL000255v2_alt:2139520-2144598	0	+	2143897	2144598	789624	5	358,56,127,103,229,	0,1272,4335,4555,4849,
#Deleted in new
chr6_GL000255v2_alt	2139625	2144180	chr6_GL000255v2_alt:2139625-2144180	2	+	2143897	2144180	789624	3	253,127,105,	0,4230,4450,
#Deleted in new
chr6_GL000255v2_alt	2139717	2155322	chr6_GL000255v2_alt:2139717-2155322	1	+	2143897	2154466	0	19	161,56,127,103,229,148,100,187,247,96,152,166,111,245,128,219,235,150,997,	0,1075,4138,4358,4652,6423,6830,7454,7748,8520,8724,9958,10856,12073,12466,12831,13525,14340,14608,
#Deleted in new
chr6_GL000255v2_alt	2139723	2155326	chr6_GL000255v2_alt:2139723-2155326	0	+	2139723	2139723	8553170	16	155,127,103,229,148,187,247,96,152,166,245,128,219,235,150,1001,	0,4132,4352,4646,6417,7448,7742,8514,8718,9952,12067,12460,12825,13519,14334,14602,
#Deleted in new
chr6_GL000255v2_alt	2139733	2155326	chr6_GL000255v2_alt:2139733-2155326	1	+	2143897	2154466	0	17	145,127,103,229,148,100,187,247,96,152,166,245,128,219,235,150,1001,	0,4122,4342,4636,6407,6814,7438,7732,8504,8708,9942,12057,12450,12815,13509,14324,14592,
#Deleted in new
chr6_GL000255v2_alt	2140147	2155322	chr6_GL000255v2_alt:2140147-2155322	1	+	2140387	2154466	0	17	252,127,103,229,148,100,187,247,96,152,166,245,128,219,235,150,997,	0,3708,3928,4222,5993,6400,7024,7318,8090,8294,9528,11643,12036,12401,13095,13910,14178,
#Deleted in new
chr6_GL000255v2_alt	2140393	2146610	chr6_GL000255v2_alt:2140393-2146610	0	+	2143897	2146610	789624	6	129,127,103,229,148,63,	0,3462,3682,3976,5747,6154,
#Deleted in new
chr6_GL000255v2_alt	2143556	2155326	chr6_GL000255v2_alt:2143556-2155326	1	+	2143897	2154466	0	16	426,103,229,148,100,187,247,96,152,166,245,128,219,235,150,1001,	0,519,813,2584,2991,3615,3909,4681,4885,6119,8234,8627,8992,9686,10501,10769,
#Deleted in new
chr6_GL000255v2_alt	2143855	2155322	chr6_GL000255v2_alt:2143855-2155322	1	+	2143897	2154466	789624	15	127,103,229,148,100,187,247,96,152,84,128,219,235,150,997,	0,220,514,2285,2692,3316,3610,4382,4586,5902,8328,8693,9387,10202,10470,
#Deleted in new
chr6_GL000255v2_alt	2143897	2147338	chr6_GL000255v2_alt:2143897-2147338	1	+	2143897	2147338	0	5	85,103,229,148,167,	0,178,472,2243,3274,
#Deleted in new
chr6_GL000255v2_alt	2146309	2147348	chr6_GL000255v2_alt:2146309-2147348	0	+	2146309	2146309	8553170	2	338,177,	0,862,
#Deleted in new
chr6_GL000255v2_alt	2146594	2153309	chr6_GL000255v2_alt:2146594-2153309	0	+	2146594	2153309	789624	11	53,187,247,96,152,84,111,135,128,219,67,	0,577,871,1643,1847,3163,3979,5306,5589,5954,6648,
#Deleted in new
chr6_GL000255v2_alt	2148524	2152216	chr6_GL000255v2_alt:2148524-2152216	0	+	2148524	2148524	8553170	3	69,166,33,	0,1151,3659,
#Deleted in new
chr6_GL000255v2_alt	2151790	2155326	chr6_GL000255v2_alt:2151790-2155326	0	+	2151790	2154466	789624	6	245,128,237,235,150,1001,	0,393,740,1452,2267,2535,
#Deleted in new
chr6_GL000255v2_alt	2152244	2154574	chr6_GL000255v2_alt:2152244-2154574	0	+	2152244	2152244	8553170	4	67,219,235,517,	0,304,998,1813,
#Deleted in new
chr6_GL000255v2_alt	2163349	2169272	chr6_GL000255v2_alt:2163349-2169272	3	+	2164202	2169149	0	14	220,140,105,132,97,89,112,69,84,133,131,48,79,296,	0,850,1251,1748,2481,2669,2974,3247,3500,3830,4144,4926,5125,5627,
#Deleted in new
chr6_GL000255v2_alt	2163386	2169272	chr6_GL000255v2_alt:2163386-2169272	1	+	2164202	2169149	0	14	158,140,105,132,97,89,112,69,84,133,131,48,79,296,	0,813,1214,1711,2444,2632,2937,3210,3463,3793,4107,4889,5088,5590,
#Deleted in new
chr6_GL000255v2_alt	2163388	2165800	chr6_GL000255v2_alt:2163388-2165800	0	+	2164202	2165800	789624	5	181,140,105,132,40,	0,811,1212,1709,2372,
#Deleted in new
chr6_GL000255v2_alt	2163407	2181636	chr6_GL000255v2_alt:2163407-2181636	0	+	2163407	2163407	8553170	41	162,140,105,132,97,89,112,69,84,445,48,79,1227,82,101,122,67,98,107,120,112,89,91,128,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,351,	0,792,1193,1690,2423,2611,2916,3189,3442,3772,4868,5067,5569,6914,7113,7504,7739,7902,8629,8856,9446,10574,11505,11853,12097,12432,12829,12994,13353,13689,13880,14214,14470,14662,14868,15117,16123,17043,17313,17649,17878,
#Deleted in new
chr6_GL000255v2_alt	2164607	2167559	chr6_GL000255v2_alt:2164607-2167559	0	+	2164607	2164607	8553170	8	98,132,97,89,112,69,463,66,	0,490,1223,1411,1716,1989,2242,2886,
#Deleted in new
chr6_GL000255v2_alt	2167116	2169272	chr6_GL000255v2_alt:2167116-2169272	0	+	2167116	2167116	8553170	3	508,278,296,	0,1159,1860,
#Deleted in new
chr6_GL000255v2_alt	2167388	2169272	chr6_GL000255v2_alt:2167388-2169272	0	+	2167388	2167388	8553170	4	236,48,79,296,	0,887,1086,1588,
#Deleted in new
chr6_GL000255v2_alt	2169370	2181636	chr6_GL000255v2_alt:2169370-2181636	1	+	2170002	2181387	789624	29	833,82,101,122,67,98,82,120,112,89,91,128,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,351,	0,951,1150,1541,1776,1939,2666,2893,3483,4611,5542,5890,6134,6469,6866,7031,7390,7726,7917,8251,8507,8699,8905,9154,10160,11080,11350,11686,11915,
#Deleted in new
chr6_GL000255v2_alt	2169370	2181633	chr6_GL000255v2_alt:2169370-2181633	3	+	2170002	2181387	789624	29	833,82,101,122,67,98,82,120,112,89,91,122,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,348,	0,951,1150,1541,1776,1939,2666,2893,3483,4611,5542,5896,6134,6469,6866,7031,7390,7726,7917,8251,8507,8699,8905,9154,10160,11080,11350,11686,11915,
#Deleted in new
chr6_GL000255v2_alt	2169417	2172958	chr6_GL000255v2_alt:2169417-2172958	0	+	2170002	2172958	789624	10	93,233,82,101,122,67,98,82,120,105,	0,553,904,1103,1494,1729,1892,2619,2846,3436,
#Deleted in new
chr6_GL000255v2_alt	2169431	2172965	chr6_GL000255v2_alt:2169431-2172965	0	+	2169431	2169431	8553170	9	79,82,101,122,67,98,82,120,112,	0,890,1089,1480,1715,1878,2605,2832,3422,
#Deleted in new
chr6_GL000255v2_alt	2169496	2181633	chr6_GL000255v2_alt:2169496-2181633	1	+	2169577	2181387	789624	30	139,233,82,101,122,67,98,82,120,112,89,91,128,104,82,77,76,103,71,126,105,69,79,128,153,207,112,176,129,348,	0,474,825,1024,1415,1650,1813,2540,2767,3357,4485,5416,5764,6008,6343,6740,6905,7264,7600,7791,8125,8381,8573,8779,9028,10034,10954,11224,11560,11789,
#Deleted in new
chr6_GL000255v2_alt	2169547	2170582	chr6_GL000255v2_alt:2169547-2170582	2	+	2170002	2170582	789624	4	88,228,82,62,	0,428,774,973,
#Deleted in new
chr6_GL000255v2_alt	2171585	2172920	chr6_GL000255v2_alt:2171585-2172920	0	+	2171585	2171585	8553170	3	533,120,67,	0,678,1268,
#Deleted in new
chr6_GL000255v2_alt	2173918	2181636	chr6_GL000255v2_alt:2173918-2181636	0	+	2173918	2173918	8553170	19	1085,128,104,82,77,76,103,71,126,173,69,79,128,153,207,112,176,129,351,	0,1342,1586,1921,2318,2483,2842,3178,3369,3635,3959,4151,4357,4606,5612,6532,6802,7138,7367,
#Deleted in new
chr6_GL000255v2_alt	2174980	2181636	chr6_GL000255v2_alt:2174980-2181636	0	+	2174980	2174980	8553170	18	23,128,104,82,77,76,103,126,105,69,79,128,153,207,112,176,129,351,	0,280,524,859,1256,1421,1780,2307,2641,2897,3089,3295,3544,4550,5470,5740,6076,6305,
#Deleted in new
chr6_GL000255v2_alt	2177301	2180851	chr6_GL000255v2_alt:2177301-2180851	0	+	2177301	2177301	8553170	8	112,105,69,79,128,153,211,131,	0,320,576,768,974,1223,2229,3419,
#Deleted in new
chr6_GL000255v2_alt	2177754	2178677	chr6_GL000255v2_alt:2177754-2178677	0	+	2177754	2177754	8553170	4	192,79,128,153,	0,315,521,770,
#Deleted in new
chr6_GL000255v2_alt	2178379	2181636	chr6_GL000255v2_alt:2178379-2181636	0	+	2178379	2178379	8553170	6	24,1213,112,176,129,351,	0,145,2071,2341,2677,2906,
#Deleted in new
chr6_GL000255v2_alt	2186504	2187327	chr6_GL000255v2_alt:2186504-2187327	3	-	2186639	2187248	789624	3	222,89,140,	0,354,683,
#Deleted in new
chr6_GL000255v2_alt	2186504	2187261	chr6_GL000255v2_alt:2186504-2187261	0	-	2186504	2186504	8553170	2	222,403,	0,354,
#Deleted in new
chr6_GL000255v2_alt	2187770	2187862	chr6_GL000255v2_alt:2187770-2187862	3	-	2187770	2187770	8553170	1	92,	0,
#Deleted in new
chr6_GL000255v2_alt	2196153	2208405	chr6_GL000255v2_alt:2196153-2208405	3	+	2196153	2208270	789624	4	82,864,461,282,	0,7546,11038,11970,
#Deleted in new
chr6_GL000255v2_alt	2201131	2210014	chr6_GL000255v2_alt:2201131-2210014	3	-	2201131	2201131	8553170	3	381,138,86,	0,7088,8797,
#Deleted in new
chr6_GL000255v2_alt	2206275	2209373	chr6_GL000255v2_alt:2206275-2209373	0	+	2206275	2208270	789624	2	1377,1250,	0,1848,
#Deleted in new
chr6_GL000255v2_alt	2238873	2245264	chr6_GL000255v2_alt:2238873-2245264	3	+	2239124	2243560	789624	5	312,337,339,769,1899,	0,2549,2976,3405,4492,
#Deleted in new
chr6_GL000255v2_alt	2238883	2245269	chr6_GL000255v2_alt:2238883-2245269	1	+	2239124	2243560	789624	3	302,1625,1904,	0,2539,4482,
#Deleted in new
chr6_GL000255v2_alt	2238883	2241575	chr6_GL000255v2_alt:2238883-2241575	0	+	2238883	2238883	8553170	2	444,153,	0,2539,
#Deleted in new
chr6_GL000255v2_alt	2238938	2244003	chr6_GL000255v2_alt:2238938-2244003	1	+	2239124	2243560	789624	6	247,328,118,101,454,638,	0,2484,2947,3335,3655,4427,
#Deleted in new
chr6_GL000255v2_alt	2266086	2291039	chr6_GL000255v2_alt:2266086-2291039	3	+	2266086	2266086	8553170	4	303,4599,386,731,	0,15051,21746,24222,
#Deleted in new
chr6_GL000255v2_alt	2285547	2290345	chr6_GL000255v2_alt:2285547-2290345	0	+	2285547	2285547	8553170	3	189,386,37,	0,2285,4761,
#Deleted in new
chr6_GL000255v2_alt	2311781	2317853	chr6_GL000255v2_alt:2311781-2317853	7	+	2311781	2311781	16724991	4	82,417,689,483,	0,650,2405,5589,
#Deleted in new
chr6_GL000255v2_alt	2312661	2314755	chr6_GL000255v2_alt:2312661-2314755	5	+	2312661	2312661	16724991	2	187,569,	0,1525,
#Deleted in new
chr6_GL000255v2_alt	2341016	2341116	chr6_GL000255v2_alt:2341016-2341116	3	+	2341016	2341016	8553170	1	100,	0,
#Deleted in new
chr6_GL000255v2_alt	2369221	2370558	chr6_GL000255v2_alt:2369221-2370558	3	-	2369379	2370554	789624	2	1069,71,	0,1266,
#Deleted in new
chr6_GL000255v2_alt	2372748	2376813	chr6_GL000255v2_alt:2372748-2376813	0	+	2372748	2372748	8553170	2	142,3679,	0,386,
#Deleted in new
chr6_GL000255v2_alt	2372823	2375295	chr6_GL000255v2_alt:2372823-2375295	0	+	2372823	2372823	8553170	2	67,210,	0,2262,
#Deleted in new
chr6_GL000255v2_alt	2372829	2398063	chr6_GL000255v2_alt:2372829-2398063	3	+	2387656	2397692	789624	6	61,164,77,30,123,397,	0,10850,14763,23627,23853,24837,
#Deleted in new
chr6_GL000255v2_alt	2372829	2398063	chr6_GL000255v2_alt:2372829-2398063	0	+	2372829	2372829	8553170	2	61,397,	0,24837,
#Deleted in new
chr6_GL000255v2_alt	2373088	2378448	chr6_GL000255v2_alt:2373088-2378448	3	-	2374020	2378421	789624	2	2437,112,	0,5248,
#Deleted in new
chr6_GL000255v2_alt	2395561	2397376	chr6_GL000255v2_alt:2395561-2397376	3	-	2395977	2397052	789624	2	772,379,	0,1436,
#Deleted in new
chr6_GL000255v2_alt	2396385	2398063	chr6_GL000255v2_alt:2396385-2398063	0	+	2396385	2396385	8553170	2	101,397,	0,1281,
#Deleted in new
chr6_GL000255v2_alt	2396446	2398062	chr6_GL000255v2_alt:2396446-2398062	1	+	2396446	2397958	789624	4	40,71,50,396,	0,236,309,1220,
#Deleted in new
chr6_GL000255v2_alt	2398758	2398945	chr6_GL000255v2_alt:2398758-2398945	7	+	2398758	2398758	16724991	1	187,	0,
#Deleted in new
chr6_GL000255v2_alt	2400453	2416245	chr6_GL000255v2_alt:2400453-2416245	3	-	2400606	2415066	789624	18	278,172,152,102,189,137,46,113,107,111,150,111,136,164,304,214,67,47,	0,524,823,2251,2449,2730,3012,3260,5967,6180,7626,8015,8285,8519,12057,14305,14597,15745,
#Deleted in new
chr6_GL000255v2_alt	2400453	2416233	chr6_GL000255v2_alt:2400453-2416233	1	-	2400606	2415066	789624	16	278,172,152,102,189,137,107,111,150,111,136,164,304,214,133,35,	0,524,823,2251,2449,2730,5967,6180,7626,8015,8285,8519,12057,14305,14597,15745,
#Deleted in new
chr6_GL000255v2_alt	2400453	2415821	chr6_GL000255v2_alt:2400453-2415821	1	-	2400606	2415632	789624	18	278,172,152,102,189,137,46,113,107,111,150,111,136,164,304,214,67,405,	0,524,823,2251,2449,2730,3012,3260,5967,6180,7626,8015,8285,8519,12057,14305,14597,14963,
#Deleted in new
chr6_GL000255v2_alt	2400453	2403254	chr6_GL000255v2_alt:2400453-2403254	0	-	2400606	2403254	789624	6	278,130,152,102,189,71,	0,524,823,2251,2449,2730,
#Deleted in new
chr6_GL000255v2_alt	2401074	2403320	chr6_GL000255v2_alt:2401074-2403320	0	-	2401074	2401074	8553170	3	75,387,115,	0,1630,2131,
#Deleted in new
chr6_GL000255v2_alt	2401110	2403133	chr6_GL000255v2_alt:2401110-2403133	0	-	2401110	2401110	8553170	4	39,152,160,231,	0,166,1536,1792,
#Deleted in new
chr6_GL000255v2_alt	2407176	2416223	chr6_GL000255v2_alt:2407176-2416223	0	-	2407176	2407176	8553170	3	509,67,25,	0,7874,9022,
#Deleted in new
chr6_GL000255v2_alt	2408118	2415118	chr6_GL000255v2_alt:2408118-2415118	0	-	2408118	2415066	789624	7	111,111,136,164,304,106,68,	0,350,620,854,4392,6640,6932,
#Deleted in new
chr6_GL000255v2_alt	2408880	2412766	chr6_GL000255v2_alt:2408880-2412766	0	-	2408880	2408880	8553170	2	256,256,	0,3630,
#Deleted in new
chr6_GL000255v2_alt	2409105	2416114	chr6_GL000255v2_alt:2409105-2416114	0	-	2409105	2415066	789624	5	31,304,214,67,84,	0,3405,5653,5945,6925,
#Deleted in new
chr6_GL000255v2_alt	2412586	2416219	chr6_GL000255v2_alt:2412586-2416219	0	-	2412586	2415066	789624	5	228,214,67,116,21,	0,2172,2464,2830,3612,
#Deleted in new
chr6_GL000255v2_alt	2412608	2416101	chr6_GL000255v2_alt:2412608-2416101	0	-	2412608	2415066	789624	4	206,359,116,59,	0,2150,2808,3434,
#Deleted in new
chr6_GL000255v2_alt	2412688	2415820	chr6_GL000255v2_alt:2412688-2415820	0	-	2412688	2415632	789624	4	126,214,67,431,	0,2070,2362,2701,
#Deleted in new
chr6_GL000255v2_alt	2412742	2416237	chr6_GL000255v2_alt:2412742-2416237	0	-	2412742	2415066	789624	3	72,359,39,	0,2016,3456,
#Deleted in new
chr6_GL000255v2_alt	2414259	2415117	chr6_GL000255v2_alt:2414259-2415117	0	-	2414259	2414259	8553170	2	713,67,	0,791,
#Deleted in new
chr6_GL000255v2_alt	2414786	2415804	chr6_GL000255v2_alt:2414786-2415804	0	-	2414786	2414786	8553170	3	186,133,388,	0,264,630,
#Deleted in new
chr6_GL000255v2_alt	2416573	2422248	chr6_GL000255v2_alt:2416573-2422248	3	+	2417501	2420749	789624	4	181,811,559,1740,	0,355,2905,3935,
#Deleted in new
chr6_GL000255v2_alt	2416578	2422248	chr6_GL000255v2_alt:2416578-2422248	1	+	2417501	2420749	789624	4	176,565,559,1740,	0,596,2900,3930,
#Deleted in new
chr6_GL000255v2_alt	2419515	2421039	chr6_GL000255v2_alt:2419515-2421039	0	+	2419515	2419515	8553170	3	94,255,531,	0,267,993,
#Deleted in new
chr6_GL000255v2_alt	2422369	2424311	chr6_GL000255v2_alt:2422369-2424311	1	-	2422633	2424210	789624	4	531,159,131,342,	0,793,1236,1600,
#Deleted in new
chr6_GL000255v2_alt	2422369	2428743	chr6_GL000255v2_alt:2422369-2428743	3	-	2422633	2428670	789624	5	531,159,131,121,478,	0,793,1236,1600,5896,
#Deleted in new
chr6_GL000255v2_alt	2422369	2423327	chr6_GL000255v2_alt:2422369-2423327	0	-	2422369	2422369	8553170	2	531,165,	0,793,
#Deleted in new
chr6_GL000255v2_alt	2423734	2428708	chr6_GL000255v2_alt:2423734-2428708	0	-	2423734	2423734	8553170	2	356,443,	0,4531,
#Deleted in new
chr6_GL000255v2_alt	2427967	2428670	chr6_GL000255v2_alt:2427967-2428670	1	-	2427967	2428670	789624	3	15,42,312,	0,345,391,
#Deleted in new
chr6_GL000255v2_alt	2431784	2435950	chr6_GL000255v2_alt:2431784-2435950	3	-	2431784	2431784	789624	3	299,33,261,	0,503,3905,
#Deleted in new
chr6_GL000255v2_alt	2455783	2461996	chr6_GL000255v2_alt:2455783-2461996	3	+	2455783	2455783	789624	2	122,1597,	0,4616,
#Deleted in new
chr6_GL000255v2_alt	2456160	2461250	chr6_GL000255v2_alt:2456160-2461250	0	+	2456160	2456160	8553170	2	44,851,	0,4239,
#Deleted in new
chr6_GL000255v2_alt	2458194	2459954	chr6_GL000255v2_alt:2458194-2459954	3	-	2458194	2458194	8553170	2	474,42,	0,1718,
#Deleted in new
chr6_GL000255v2_alt	2460046	2461029	chr6_GL000255v2_alt:2460046-2461029	0	+	2460046	2460046	8553170	2	41,630,	0,353,
#Deleted in new
chr6_GL000255v2_alt	2524180	2527508	chr6_GL000255v2_alt:2524180-2527508	1	-	2524598	2527493	789624	8	423,48,51,120,276,276,270,88,	0,587,742,1214,1455,2318,2840,3240,
#Deleted in new
chr6_GL000255v2_alt	2524180	2527552	chr6_GL000255v2_alt:2524180-2527552	3	-	2524598	2527493	0	8	423,48,33,120,276,276,270,132,	0,587,742,1214,1455,2318,2840,3240,
#Deleted in new
chr6_GL000255v2_alt	2524180	2527508	chr6_GL000255v2_alt:2524180-2527508	1	-	2524501	2527493	789624	7	423,48,149,276,276,270,88,	0,587,1185,1455,2318,2840,3240,
#Deleted in new
chr6_GL000255v2_alt	2524180	2527515	chr6_GL000255v2_alt:2524180-2527515	1	-	2524501	2527493	789624	6	413,120,276,276,270,95,	0,1214,1455,2318,2840,3240,
#Deleted in new
chr6_GL000255v2_alt	2524180	2527471	chr6_GL000255v2_alt:2524180-2527471	0	-	2524180	2524180	8553170	6	423,48,33,120,276,973,	0,587,742,1214,1455,2318,
#Deleted in new
chr6_GL000255v2_alt	2524180	2527527	chr6_GL000255v2_alt:2524180-2527527	0	-	2526704	2527493	789624	8	423,48,33,120,276,259,270,107,	0,587,742,1214,1455,2318,2840,3240,
#Deleted in new
chr6_GL000255v2_alt	2524180	2525096	chr6_GL000255v2_alt:2524180-2525096	0	-	2524180	2524180	8553170	2	423,329,	0,587,
#Deleted in new
chr6_GL000255v2_alt	2524180	2525848	chr6_GL000255v2_alt:2524180-2525848	0	-	2524180	2524180	8553170	4	423,48,592,213,	0,587,742,1455,
#Deleted in new
chr6_GL000255v2_alt	2524768	2527493	chr6_GL000255v2_alt:2524768-2527493	1	-	2524768	2526754	789624	8	47,33,120,276,276,100,51,73,	0,154,626,867,1730,2252,2471,2652,
#Deleted in new
chr6_GL000255v2_alt	2524789	2525723	chr6_GL000255v2_alt:2524789-2525723	1	-	2524789	2525723	789624	3	26,33,88,	0,133,846,
#Deleted in new
chr6_GL000255v2_alt	2524920	2611102	chr6_GL000255v2_alt:2524920-2611102	3	-	2524920	2611102	789624	3	35,117,88,	0,85873,86094,
#Deleted in new
chr6_GL000255v2_alt	2525635	2527495	chr6_GL000255v2_alt:2525635-2527495	0	-	2525635	2525635	8553170	5	276,69,276,270,75,	0,422,863,1385,1785,
#Deleted in new
chr6_GL000255v2_alt	2525639	2527491	chr6_GL000255v2_alt:2525639-2527491	0	-	2525639	2527491	789624	5	118,47,276,270,71,	0,225,859,1381,1781,
#Deleted in new
chr6_GL000255v2_alt	2525646	2527552	chr6_GL000255v2_alt:2525646-2527552	0	-	2525646	2525646	8553170	3	265,276,532,	0,852,1374,
#Deleted in new
chr6_GL000255v2_alt	2526524	2527512	chr6_GL000255v2_alt:2526524-2527512	0	-	2526524	2526524	8553170	2	766,92,	0,896,
#Deleted in new
chr6_GL000255v2_alt	2530964	2534137	chr6_GL000255v2_alt:2530964-2534137	7	+	2530964	2530964	16724991	1	3173,	0,
#Deleted in new
chr6_GL000255v2_alt	2535699	2536899	chr6_GL000255v2_alt:2535699-2536899	7	+	2535699	2535699	16724991	1	1200,	0,
#Deleted in new
chr6_GL000255v2_alt	2543175	2544627	chr6_GL000255v2_alt:2543175-2544627	7	-	2543175	2543175	16724991	1	1452,	0,
#Deleted in new
chr6_GL000255v2_alt	2563512	2564247	chr6_GL000255v2_alt:2563512-2564247	7	-	2563512	2563512	16724991	2	233,73,	0,662,
#Deleted in new
chr6_GL000255v2_alt	2609568	2612898	chr6_GL000255v2_alt:2609568-2612898	1	-	2610169	2612855	0	8	425,48,33,117,276,276,270,116,	0,597,751,1225,1446,2294,2816,3214,
#Deleted in new
chr6_GL000255v2_alt	2609568	2612099	chr6_GL000255v2_alt:2609568-2612099	0	-	2610169	2612099	789624	6	425,48,51,117,276,237,	0,597,751,1225,1446,2294,
#Deleted in new
chr6_GL000255v2_alt	2609568	2610763	chr6_GL000255v2_alt:2609568-2610763	0	-	2609568	2609568	8553170	3	425,48,444,	0,597,751,
#Deleted in new
chr6_GL000255v2_alt	2609568	2610493	chr6_GL000255v2_alt:2609568-2610493	0	-	2609568	2609568	8553170	2	425,328,	0,597,
#Deleted in new
chr6_GL000255v2_alt	2610320	2612846	chr6_GL000255v2_alt:2610320-2612846	1	-	2610320	2612846	789624	5	28,123,274,270,64,	0,469,1544,2064,2462,
#Deleted in new
chr6_GL000255v2_alt	2610808	2611497	chr6_GL000255v2_alt:2610808-2611497	0	-	2610808	2610808	8553170	2	102,483,	0,206,
#Deleted in new
chr6_GL000255v2_alt	2610868	2612857	chr6_GL000255v2_alt:2610868-2612857	0	-	2611445	2612855	789624	6	42,276,66,276,270,75,	0,146,567,994,1516,1914,
#Deleted in new
chr6_GL000255v2_alt	2611088	2612876	chr6_GL000255v2_alt:2611088-2612876	0	-	2611088	2611088	8553170	3	202,792,94,	0,774,1694,
#Deleted in new
chr6_GL000255v2_alt	2611204	2612885	chr6_GL000255v2_alt:2611204-2612885	0	-	2611204	2611204	8553170	3	86,276,501,	0,658,1180,
#Deleted in new
chr6_GL000255v2_alt	2622040	2622587	chr6_GL000255v2_alt:2622040-2622587	7	-	2622040	2622040	16724991	1	547,	0,
#Deleted in new
chr6_GL000255v2_alt	2625826	2625933	chr6_GL000255v2_alt:2625826-2625933	3	+	2625826	2625826	8553170	1	107,	0,
#Deleted in new
chr6_GL000255v2_alt	2633108	2633706	chr6_GL000255v2_alt:2633108-2633706	7	+	2633108	2633108	16724991	1	598,	0,
#Deleted in new
chr6_GL000255v2_alt	2636102	2636529	chr6_GL000255v2_alt:2636102-2636529	7	+	2636102	2636102	16724991	1	427,	0,
#Deleted in new
chr6_GL000255v2_alt	2637752	2637967	chr6_GL000255v2_alt:2637752-2637967	7	-	2637752	2637752	16724991	2	5,48,	0,167,
#Deleted in new
chr6_GL000255v2_alt	2655410	2670984	chr6_GL000255v2_alt:2655410-2670984	3	+	2666442	2670864	789624	6	980,255,116,279,132,248,	0,10860,11561,12264,12643,15326,
#Deleted in new
chr6_GL000255v2_alt	2656273	2667953	chr6_GL000255v2_alt:2656273-2667953	0	+	2656273	2656273	8553170	4	117,255,288,279,	0,9997,10526,11401,
#Deleted in new
chr6_GL000255v2_alt	2656375	2670984	chr6_GL000255v2_alt:2656375-2670984	1	+	2659259	2670864	0	8	15,200,258,255,288,279,132,248,	0,1408,2696,9895,10424,11299,11678,14361,
#Deleted in new
chr6_GL000255v2_alt	2657778	2657877	chr6_GL000255v2_alt:2657778-2657877	3	-	2657778	2657778	8553170	1	99,	0,
#Deleted in new
chr6_GL000255v2_alt	2659165	2671966	chr6_GL000255v2_alt:2659165-2671966	0	+	2659259	2667837	789624	6	164,255,151,279,132,1230,	0,7105,7771,8509,8888,11571,
#Deleted in new
chr6_GL000255v2_alt	2659193	2671038	chr6_GL000255v2_alt:2659193-2671038	1	+	2659259	2670864	0	6	136,255,288,279,132,302,	0,7077,7606,8481,8860,11543,
#Deleted in new
chr6_GL000255v2_alt	2659298	2671040	chr6_GL000255v2_alt:2659298-2671040	0	+	2659298	2670864	789624	5	31,255,279,132,304,	0,6972,8376,8755,11438,
#Deleted in new
chr6_GL000255v2_alt	2666590	2668185	chr6_GL000255v2_alt:2666590-2668185	0	+	2666590	2666590	8553170	3	497,279,132,	0,1084,1463,
#Deleted in new
chr6_GL000255v2_alt	2752588	2752690	chr6_GL000255v2_alt:2752588-2752690	3	-	2752588	2752588	8553170	1	102,	0,
#Deleted in new
chr6_GL000255v2_alt	2753985	2767002	chr6_GL000255v2_alt:2753985-2767002	3	+	2754093	2765795	789624	6	178,255,159,279,132,1335,	0,7517,8172,8922,9300,11682,
#Deleted in new
chr6_GL000255v2_alt	2754014	2767002	chr6_GL000255v2_alt:2754014-2767002	1	+	2754093	2765795	789624	6	149,255,288,279,132,1335,	0,7488,8014,8893,9271,11653,
#Deleted in new
chr6_GL000255v2_alt	2761820	2763417	chr6_GL000255v2_alt:2761820-2763417	0	+	2761820	2761820	8553170	3	496,279,132,	0,1087,1465,
#Deleted in new
chr6_GL000255v2_alt	2775355	2776167	chr6_GL000255v2_alt:2775355-2776167	7	-	2775355	2775355	16724991	2	171,327,	0,485,
#Deleted in new
chr6_GL000255v2_alt	2783975	2784555	chr6_GL000255v2_alt:2783975-2784555	7	+	2783975	2783975	16724991	1	580,	0,
#Deleted in new
chr6_GL000255v2_alt	2784578	2786094	chr6_GL000255v2_alt:2784578-2786094	3	+	2784876	2785797	789624	2	469,486,	0,1030,
#Deleted in new
chr6_GL000255v2_alt	2786080	2802434	chr6_GL000255v2_alt:2786080-2802434	3	-	2786295	2796389	0	13	232,148,145,110,132,119,184,93,128,343,199,101,105,	0,559,833,1076,2560,5147,6280,8541,8925,10098,11725,15884,16249,
#Deleted in new
chr6_GL000255v2_alt	2786080	2796393	chr6_GL000255v2_alt:2786080-2796393	1	-	2786654	2796389	789624	10	232,171,145,110,132,119,184,93,128,215,	0,559,833,1076,2560,5147,6280,8541,8925,10098,
#Deleted in new
chr6_GL000255v2_alt	2786080	2798304	chr6_GL000255v2_alt:2786080-2798304	1	-	2786295	2796389	0	11	232,148,145,110,132,119,184,93,128,213,499,	0,559,833,1076,2560,5147,6280,8541,8925,10098,11725,
#Deleted in new
chr6_GL000255v2_alt	2786080	2798304	chr6_GL000255v2_alt:2786080-2798304	1	-	2786295	2796389	0	11	232,148,145,110,132,119,184,93,128,343,499,	0,559,833,1076,2560,5147,6280,8541,8925,10098,11725,
#Deleted in new
chr6_GL000255v2_alt	2786080	2787605	chr6_GL000255v2_alt:2786080-2787605	0	-	2786080	2786080	8553170	4	232,148,145,449,	0,559,833,1076,
#Deleted in new
chr6_GL000255v2_alt	2786080	2797873	chr6_GL000255v2_alt:2786080-2797873	0	-	2786080	2786080	8553170	10	232,148,145,110,2706,184,93,128,213,68,	0,559,833,1076,2560,6280,8541,8925,10098,11725,
#Deleted in new
chr6_GL000255v2_alt	2786080	2791336	chr6_GL000255v2_alt:2786080-2791336	0	-	2786966	2791336	789624	6	232,148,126,110,132,109,	0,559,833,1076,2560,5147,
#Deleted in new
chr6_GL000255v2_alt	2786639	2790372	chr6_GL000255v2_alt:2786639-2790372	0	-	2786639	2790372	789624	5	148,145,110,132,26,	0,274,517,2001,3707,
#Deleted in new
chr6_GL000255v2_alt	2786976	2787532	chr6_GL000255v2_alt:2786976-2787532	0	-	2786976	2786976	8553170	2	63,376,	0,180,
#Deleted in new
chr6_GL000255v2_alt	2787134	2798257	chr6_GL000255v2_alt:2787134-2798257	0	-	2787134	2787134	8553170	6	132,132,119,184,213,452,	0,1506,4093,5226,9044,10671,
#Deleted in new
chr6_GL000255v2_alt	2787162	2797837	chr6_GL000255v2_alt:2787162-2797837	0	-	2787162	2796376	789624	6	104,132,119,184,343,32,	0,1478,4065,5198,9016,10643,
#Deleted in new
chr6_GL000255v2_alt	2788273	2797857	chr6_GL000255v2_alt:2788273-2797857	0	-	2788273	2788273	8553170	5	3073,184,93,128,1679,	0,4087,6348,6732,7905,
#Deleted in new
chr6_GL000255v2_alt	2788640	2797387	chr6_GL000255v2_alt:2788640-2797387	0	-	2788640	2796389	789624	7	132,119,184,93,128,213,136,	0,2587,3720,5981,6365,7538,8611,
#Deleted in new
chr6_GL000255v2_alt	2791248	2797874	chr6_GL000255v2_alt:2791248-2797874	0	-	2791248	2796389	789624	6	98,184,93,128,245,69,	0,1112,3373,3757,4930,6557,
#Deleted in new
chr6_GL000255v2_alt	2791255	2797340	chr6_GL000255v2_alt:2791255-2797340	0	-	2791255	2796389	789624	6	91,184,93,128,343,89,	0,1105,3366,3750,4923,5996,
#Deleted in new
chr6_GL000255v2_alt	2791267	2797793	chr6_GL000255v2_alt:2791267-2797793	0	-	2791267	2796389	789624	6	79,184,93,128,343,105,	0,1093,3354,3738,4911,6421,
#Deleted in new
chr6_GL000255v2_alt	2792234	2792310	chr6_GL000255v2_alt:2792234-2792310	3	-	2792234	2792234	789624	1	76,	0,
#Deleted in new
chr6_GL000255v2_alt	2792469	2797845	chr6_GL000255v2_alt:2792469-2797845	0	-	2792469	2796389	789624	5	75,177,128,213,40,	0,2152,2536,3709,5336,
#Deleted in new
chr6_GL000255v2_alt	2792483	2797585	chr6_GL000255v2_alt:2792483-2797585	0	-	2792483	2797556	789624	5	61,93,128,213,96,	0,2138,2522,3695,5006,
#Deleted in new
chr6_GL000255v2_alt	2794677	2797842	chr6_GL000255v2_alt:2794677-2797842	0	-	2794677	2796389	789624	5	37,128,343,175,37,	0,328,1501,2331,3128,
#Deleted in new
chr6_GL000255v2_alt	2794689	2797847	chr6_GL000255v2_alt:2794689-2797847	0	-	2794689	2797051	789624	5	25,128,213,175,42,	0,316,1489,2319,3116,
#Deleted in new
chr6_GL000255v2_alt	2794740	2797859	chr6_GL000255v2_alt:2794740-2797859	0	-	2794740	2796389	789624	4	58,128,343,54,	0,265,1438,3065,
#Deleted in new
chr6_GL000255v2_alt	2795057	2797729	chr6_GL000255v2_alt:2795057-2797729	0	-	2795057	2796389	789624	3	76,343,240,	0,1121,2432,
#Deleted in new
chr6_GL000255v2_alt	2796956	2797034	chr6_GL000255v2_alt:2796956-2797034	3	-	2796956	2796956	789624	1	78,	0,
#Deleted in new
chr6_GL000255v2_alt	2798159	2798983	chr6_GL000255v2_alt:2798159-2798983	3	+	2798159	2798159	789624	2	93,423,	0,401,
#Deleted in new
chr6_GL000255v2_alt	2798228	2798994	chr6_GL000255v2_alt:2798228-2798994	0	+	2798228	2798228	8553170	2	24,430,	0,336,
#Deleted in new
chr6_GL000255v2_alt	2800317	2802459	chr6_GL000255v2_alt:2800317-2802459	1	-	2801263	2802411	789624	3	1120,101,130,	0,1647,2012,
#Deleted in new
chr6_GL000255v2_alt	2800317	2802489	chr6_GL000255v2_alt:2800317-2802489	3	-	2801263	2802411	789624	3	1078,23,160,	0,1725,2012,
#Deleted in new
chr6_GL000255v2_alt	2801139	2802607	chr6_GL000255v2_alt:2801139-2802607	0	-	2801139	2801139	8553170	3	298,161,124,	0,765,1344,
#Deleted in new
chr6_GL000255v2_alt	2801272	2802700	chr6_GL000255v2_alt:2801272-2802700	0	-	2801272	2801272	8553170	3	165,101,217,	0,692,1211,
#Deleted in new
chr6_GL000255v2_alt	2802721	2814673	chr6_GL000255v2_alt:2802721-2814673	3	+	2804025	2814455	789624	4	104,277,222,808,	0,1292,10750,11144,
#Deleted in new
chr6_GL000255v2_alt	2803431	2814673	chr6_GL000255v2_alt:2803431-2814673	1	+	2803545	2814455	789624	4	171,277,222,808,	0,582,10040,10434,
#Deleted in new
chr6_GL000255v2_alt	2803463	2814673	chr6_GL000255v2_alt:2803463-2814673	1	+	2803545	2814455	789624	4	139,277,177,808,	0,550,10008,10402,
#Deleted in new
chr6_GL000255v2_alt	2803490	2813549	chr6_GL000255v2_alt:2803490-2813549	0	+	2803490	2803490	8553170	4	112,277,87,78,	0,523,9051,9981,
#Deleted in new
chr6_GL000255v2_alt	2803511	2813803	chr6_GL000255v2_alt:2803511-2813803	0	+	2803511	2803511	8553170	3	91,277,332,	0,502,9960,
#Deleted in new
chr6_GL000255v2_alt	2827870	2830143	chr6_GL000255v2_alt:2827870-2830143	3	+	2828561	2829512	789624	4	249,108,106,1044,	0,682,876,1229,
#Deleted in new
chr6_GL000255v2_alt	2828086	2830143	chr6_GL000255v2_alt:2828086-2830143	0	+	2828086	2828086	8553170	3	33,300,1044,	0,466,1013,
#Deleted in new
chr6_GL000255v2_alt	2828099	2830143	chr6_GL000255v2_alt:2828099-2830143	1	+	2828561	2829512	789624	4	164,108,106,1044,	0,453,647,1000,
#Deleted in new
chr6_GL000255v2_alt	2828110	2830143	chr6_GL000255v2_alt:2828110-2830143	0	+	2828110	2828110	8553170	3	153,300,1044,	0,442,989,
#Deleted in new
chr6_GL000255v2_alt	2831385	2834157	chr6_GL000255v2_alt:2831385-2834157	3	+	2831560	2833358	0	4	361,46,48,1221,	0,969,1202,1551,
#Deleted in new
chr6_GL000255v2_alt	2836375	2838246	chr6_GL000255v2_alt:2836375-2838246	3	-	2836529	2838238	0	4	609,72,46,170,	0,1004,1259,1701,
#Deleted in new
chr6_GL000255v2_alt	2836375	2838248	chr6_GL000255v2_alt:2836375-2838248	0	-	2836375	2836375	8553170	3	609,72,172,	0,1004,1701,
#Deleted in new
chr6_GL000255v2_alt	2836375	2838343	chr6_GL000255v2_alt:2836375-2838343	0	-	2836375	2836375	8553170	3	609,72,27,	0,1004,1941,
#Deleted in new
chr6_GL000255v2_alt	2841944	2844732	chr6_GL000255v2_alt:2841944-2844732	1	+	2843120	2844499	789624	4	192,119,23,392,	0,1076,1820,2396,
#Deleted in new
chr6_GL000255v2_alt	2841999	2844732	chr6_GL000255v2_alt:2841999-2844732	1	+	2843120	2844499	789624	5	137,119,93,23,392,	0,1021,1462,1765,2341,
#Deleted in new
chr6_GL000255v2_alt	2842014	2844732	chr6_GL000255v2_alt:2842014-2844732	0	+	2842014	2842014	8553170	2	122,1712,	0,1006,
#Deleted in new
chr6_GL000255v2_alt	2842037	2844732	chr6_GL000255v2_alt:2842037-2844732	1	+	2843120	2844408	789624	3	99,119,392,	0,983,2303,
#Deleted in new
chr6_GL000255v2_alt	2842037	2844732	chr6_GL000255v2_alt:2842037-2844732	1	+	2843120	2844408	789624	3	99,119,347,	0,983,2348,
#Deleted in new
chr6_GL000255v2_alt	2842040	2844732	chr6_GL000255v2_alt:2842040-2844732	1	+	2843120	2844499	789624	4	96,119,23,347,	0,980,1724,2345,
#Deleted in new
chr6_GL000255v2_alt	2842055	2844732	chr6_GL000255v2_alt:2842055-2844732	0	+	2842055	2842055	8553170	3	81,123,1361,	0,965,1316,
#Deleted in new
chr6_GL000255v2_alt	2842519	2844732	chr6_GL000255v2_alt:2842519-2844732	1	+	2843120	2844408	789624	4	109,119,93,413,	0,501,942,1800,
#Deleted in new
chr6_GL000255v2_alt	2842668	2844732	chr6_GL000255v2_alt:2842668-2844732	1	+	2843120	2844408	789624	3	92,119,392,	0,352,1672,
#Deleted in new
chr6_GL000255v2_alt	2842715	2843551	chr6_GL000255v2_alt:2842715-2843551	0	+	2843120	2843551	789624	3	45,119,90,	0,305,746,
#Deleted in new
chr6_GL000255v2_alt	2842829	2844732	chr6_GL000255v2_alt:2842829-2844732	1	+	2843120	2844408	789624	3	108,119,392,	0,191,1511,
#Deleted in new
chr6_GL000255v2_alt	2842842	2844732	chr6_GL000255v2_alt:2842842-2844732	1	+	2843120	2844408	789624	2	297,392,	0,1498,
#Deleted in new
chr6_GL000255v2_alt	2842852	2844732	chr6_GL000255v2_alt:2842852-2844732	1	+	2843120	2844499	789624	5	85,119,93,23,392,	0,168,609,912,1488,
#Deleted in new
chr6_GL000255v2_alt	2842886	2844732	chr6_GL000255v2_alt:2842886-2844732	1	+	2843120	2844499	789624	3	253,23,392,	0,878,1454,
#Deleted in new
chr6_GL000255v2_alt	2842900	2844732	chr6_GL000255v2_alt:2842900-2844732	1	+	2843120	2844499	789624	4	37,119,23,392,	0,120,864,1440,
#Deleted in new
chr6_GL000255v2_alt	2842906	2843662	chr6_GL000255v2_alt:2842906-2843662	0	+	2843120	2843662	789624	4	21,119,93,26,	0,114,555,730,
#Deleted in new
chr6_GL000255v2_alt	2842917	2844732	chr6_GL000255v2_alt:2842917-2844732	1	+	2843120	2844408	789624	4	20,119,93,392,	0,103,544,1423,
#Deleted in new
chr6_GL000255v2_alt	2842937	2844732	chr6_GL000255v2_alt:2842937-2844732	1	+	2843120	2844499	789624	4	202,93,23,347,	0,524,827,1448,
#Deleted in new
chr6_GL000255v2_alt	2843020	2844732	chr6_GL000255v2_alt:2843020-2844732	3	+	2843120	2844499	789624	3	119,23,413,	0,744,1299,
#Deleted in new
chr6_GL000255v2_alt	2843020	2844732	chr6_GL000255v2_alt:2843020-2844732	1	+	2843120	2844408	789624	2	119,413,	0,1299,
#Deleted in new
chr6_GL000255v2_alt	2843020	2844732	chr6_GL000255v2_alt:2843020-2844732	1	+	2843120	2844499	789624	4	119,93,23,413,	0,441,744,1299,
#Deleted in new
chr6_GL000255v2_alt	2843075	2844732	chr6_GL000255v2_alt:2843075-2844732	0	+	2843075	2843075	8553170	3	64,151,392,	0,561,1265,
#Deleted in new
chr6_GL000255v2_alt	2843124	2844732	chr6_GL000255v2_alt:2843124-2844732	0	+	2843124	2844408	789624	3	15,93,347,	0,337,1261,
#Deleted in new
chr6_GL000255v2_alt	2844717	2848806	chr6_GL000255v2_alt:2844717-2848806	1	-	2844889	2848542	0	4	282,108,345,307,	0,631,887,3782,
#Deleted in new
chr6_GL000255v2_alt	2844717	2848806	chr6_GL000255v2_alt:2844717-2848806	3	-	2845016	2848542	0	4	337,108,345,307,	0,631,887,3782,
#Deleted in new
chr6_GL000255v2_alt	2844717	2848633	chr6_GL000255v2_alt:2844717-2848633	0	-	2844717	2844717	8553170	4	337,108,118,22,	0,631,887,3894,
#Deleted in new
chr6_GL000255v2_alt	2844717	2848780	chr6_GL000255v2_alt:2844717-2848780	0	-	2844717	2844717	8553170	4	337,108,345,103,	0,631,887,3960,
#Deleted in new
chr6_GL000255v2_alt	2845096	2848806	chr6_GL000255v2_alt:2845096-2848806	1	-	2845134	2848542	0	4	115,108,345,307,	0,252,508,3403,
#Deleted in new
chr6_GL000255v2_alt	2845119	2848570	chr6_GL000255v2_alt:2845119-2848570	1	-	2845134	2848542	0	5	92,108,118,152,71,	0,229,485,678,3380,
#Deleted in new
chr6_GL000255v2_alt	2845119	2848570	chr6_GL000255v2_alt:2845119-2848570	0	-	2845441	2848542	789624	4	92,108,290,71,	0,229,540,3380,
#Deleted in new
chr6_GL000255v2_alt	2866905	2867179	chr6_GL000255v2_alt:2866905-2867179	7	-	2866905	2866905	16724991	1	274,	0,
#Deleted in new
chr6_GL000255v2_alt	2871005	2872843	chr6_GL000255v2_alt:2871005-2872843	3	+	2871151	2872722	0	6	171,62,67,42,163,206,	0,337,486,920,1160,1632,
#Deleted in new
chr6_GL000255v2_alt	2871038	2872162	chr6_GL000255v2_alt:2871038-2872162	0	+	2871038	2871038	8553170	3	77,62,671,	0,304,453,
#Deleted in new
chr6_GL000255v2_alt	2871048	2872843	chr6_GL000255v2_alt:2871048-2872843	0	+	2871048	2872722	789624	6	67,62,67,42,163,206,	0,294,443,877,1117,1589,
#Deleted in new
chr6_GL000255v2_alt	2871101	2872843	chr6_GL000255v2_alt:2871101-2872843	0	+	2871101	2871101	8553170	4	75,62,837,206,	0,241,390,1536,
#Deleted in new
chr6_GL000255v2_alt	2871447	2872843	chr6_GL000255v2_alt:2871447-2872843	0	+	2871447	2871447	8553170	3	111,163,206,	0,718,1190,
#Deleted in new
chr6_GL000255v2_alt	2871812	2872843	chr6_GL000255v2_alt:2871812-2872843	1	+	2871933	2872722	0	3	155,163,206,	0,353,825,
#Deleted in new
chr6_GL000255v2_alt	2876541	2893589	chr6_GL000255v2_alt:2876541-2893589	1	+	2878608	2893404	789624	31	139,175,178,100,73,144,152,80,143,91,217,475,191,298,211,1854,269,131,130,86,225,141,72,168,83,211,99,213,95,91,326,	0,2004,3010,3539,3728,4449,4738,5070,5298,6050,6260,7043,8422,8826,9867,10415,12655,13135,13512,13748,14029,14408,14670,14858,15243,15485,15786,16009,16318,16510,16722,
#Deleted in new
chr6_GL000255v2_alt	2876545	2882682	chr6_GL000255v2_alt:2876545-2882682	0	+	2876545	2876545	8553170	8	135,100,73,144,152,80,143,91,	0,3535,3724,4445,4734,5066,5294,6046,
#Deleted in new
chr6_GL000255v2_alt	2876546	2893589	chr6_GL000255v2_alt:2876546-2893589	1	+	2878608	2893404	789624	31	134,212,178,100,73,144,152,80,143,91,217,475,191,298,211,1854,269,131,130,86,225,141,72,168,83,211,99,213,95,91,326,	0,1962,3005,3534,3723,4444,4733,5065,5293,6045,6255,7038,8417,8821,9862,10410,12650,13130,13507,13743,14024,14403,14665,14853,15238,15480,15781,16004,16313,16505,16717,
#Deleted in new
chr6_GL000255v2_alt	2878897	2879029	chr6_GL000255v2_alt:2878897-2879029	3	+	2878897	2878897	789624	1	132,	0,
#Deleted in new
chr6_GL000255v2_alt	2880721	2881317	chr6_GL000255v2_alt:2880721-2881317	0	+	2880721	2880721	8553170	2	413,38,	0,558,
#Deleted in new
chr6_GL000255v2_alt	2881573	2882894	chr6_GL000255v2_alt:2881573-2882894	0	+	2881573	2881573	8553170	3	409,91,93,	0,1018,1228,
#Deleted in new
chr6_GL000255v2_alt	2884459	2885588	chr6_GL000255v2_alt:2884459-2885588	0	+	2884459	2884459	8553170	2	695,221,	0,908,
#Deleted in new
chr6_GL000255v2_alt	2889771	2890574	chr6_GL000255v2_alt:2889771-2890574	0	+	2889771	2889771	8553170	2	412,285,	0,518,
#Deleted in new
chr6_GL000255v2_alt	2890224	2891134	chr6_GL000255v2_alt:2890224-2891134	0	+	2890224	2890224	8553170	2	571,185,	0,725,
#Deleted in new
chr6_GL000255v2_alt	2891059	2891527	chr6_GL000255v2_alt:2891059-2891527	2	+	2891059	2891059	8553170	2	31,316,	0,152,
#Deleted in new
chr6_GL000255v2_alt	2891177	2892068	chr6_GL000255v2_alt:2891177-2892068	0	+	2891177	2891177	8553170	2	690,42,	0,849,
#Deleted in new
chr6_GL000255v2_alt	2891193	2892629	chr6_GL000255v2_alt:2891193-2892629	0	+	2891193	2891193	8553170	4	90,468,211,302,	0,206,833,1134,
#Deleted in new
chr6_GL000255v2_alt	2892064	2893589	chr6_GL000255v2_alt:2892064-2893589	0	+	2892064	2892064	8553170	5	173,99,213,95,538,	0,263,486,795,987,
#Deleted in new
chr6_GL000255v2_alt	2892353	2893589	chr6_GL000255v2_alt:2892353-2893589	0	+	2892353	2892353	8553170	3	73,404,538,	0,197,698,
#Deleted in new
chr6_GL000255v2_alt	2892652	2893589	chr6_GL000255v2_alt:2892652-2893589	0	+	2892652	2892652	8553170	3	302,91,326,	0,399,611,
#Deleted in new
chr6_GL000255v2_alt	2894840	2908454	chr6_GL000255v2_alt:2894840-2908454	1	-	2894947	2907574	0	25	203,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,254,75,54,197,118,121,236,	0,477,1176,1362,1622,1769,2081,2297,2516,2753,3089,3806,4870,5062,5505,5926,6387,7374,8570,9657,9891,10179,10490,12626,13378,
#Deleted in new
chr6_GL000255v2_alt	2894840	2908212	chr6_GL000255v2_alt:2894840-2908212	1	-	2894947	2907574	0	25	203,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,155,	0,477,1176,1362,1622,1769,2081,2297,2516,2753,3089,3806,4870,5062,5505,5926,6387,7374,8570,9657,9891,10179,10490,12626,13217,
#Deleted in new
chr6_GL000255v2_alt	2894840	2908524	chr6_GL000255v2_alt:2894840-2908524	1	-	2894947	2907574	0	25	203,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,282,	0,477,1176,1362,1622,1769,2081,2297,2516,2753,3089,3806,4870,5062,5505,5926,6387,7374,8570,9657,9891,10179,10490,12626,13402,
#Deleted in new
chr6_GL000255v2_alt	2894840	2897046	chr6_GL000255v2_alt:2894840-2897046	2	-	2894947	2897046	789624	6	203,108,144,60,147,125,	0,1176,1362,1622,1769,2081,
#Deleted in new
chr6_GL000255v2_alt	2894840	2896755	chr6_GL000255v2_alt:2894840-2896755	0	-	2894947	2896755	789624	4	203,108,60,146,	0,1176,1622,1769,
#Deleted in new
chr6_GL000255v2_alt	2894840	2895606	chr6_GL000255v2_alt:2894840-2895606	0	-	2894840	2894840	8553170	2	203,289,	0,477,
#Deleted in new
chr6_GL000255v2_alt	2894840	2896357	chr6_GL000255v2_alt:2894840-2896357	0	-	2894840	2894840	8553170	4	203,147,108,155,	0,477,1176,1362,
#Deleted in new
chr6_GL000255v2_alt	2894841	2908519	chr6_GL000255v2_alt:2894841-2908519	1	-	2894947	2907574	0	24	202,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,277,	0,1175,1361,1621,1768,2080,2296,2515,2752,3088,3805,4869,5061,5504,5925,6386,7373,8569,9656,9890,10178,10489,12625,13401,
#Deleted in new
chr6_GL000255v2_alt	2894841	2908519	chr6_GL000255v2_alt:2894841-2908519	1	-	2894947	2907574	0	23	202,108,60,147,125,103,54,170,189,15,85,113,78,253,198,130,236,75,54,197,118,121,277,	0,1175,1621,1768,2080,2296,2515,2752,3088,4077,4869,5061,5504,5925,6386,7373,8569,9656,9890,10178,10489,12625,13401,
#Deleted in new
chr6_GL000255v2_alt	2896642	2897963	chr6_GL000255v2_alt:2896642-2897963	0	-	2896642	2896642	8553170	3	768,170,34,	0,951,1287,
#Deleted in new
chr6_GL000255v2_alt	2897665	2900137	chr6_GL000255v2_alt:2897665-2900137	0	-	2897665	2897665	8553170	5	98,292,287,88,235,	0,264,981,2045,2237,
#Deleted in new
chr6_GL000255v2_alt	2898036	2908497	chr6_GL000255v2_alt:2898036-2908497	0	-	2898036	2907574	789624	16	185,287,88,113,108,78,253,198,130,236,75,54,197,118,121,166,	0,610,1674,1866,2091,2309,2730,3191,4178,5374,6461,6695,6983,7294,9430,10295,
#Deleted in new
chr6_GL000255v2_alt	2898501	2900021	chr6_GL000255v2_alt:2898501-2900021	0	-	2898501	2898501	8553170	3	432,88,119,	0,1209,1401,
#Deleted in new
chr6_GL000255v2_alt	2898649	2900890	chr6_GL000255v2_alt:2898649-2900890	0	-	2898649	2900890	789624	5	284,88,113,105,124,	0,1061,1253,1696,2117,
#Deleted in new
chr6_GL000255v2_alt	2898687	2901311	chr6_GL000255v2_alt:2898687-2901311	0	-	2898687	2901311	789624	7	246,88,113,78,96,31,84,	0,1023,1215,1658,2079,2301,2540,
#Deleted in new
chr6_GL000255v2_alt	2898776	2901382	chr6_GL000255v2_alt:2898776-2901382	0	-	2898776	2898776	8553170	4	157,88,253,155,	0,934,1990,2451,
#Deleted in new
chr6_GL000255v2_alt	2898930	2901324	chr6_GL000255v2_alt:2898930-2901324	0	-	2898930	2901324	789624	5	3,88,113,253,97,	0,780,972,1836,2297,
#Deleted in new
chr6_GL000255v2_alt	2900137	2908176	chr6_GL000255v2_alt:2900137-2908176	0	-	2900137	2907574	789624	12	98,78,253,198,130,236,75,54,197,118,121,131,	0,208,629,1090,2077,3273,4360,4594,4882,5193,7329,7908,
#Deleted in new
chr6_GL000255v2_alt	2900314	2901006	chr6_GL000255v2_alt:2900314-2901006	0	-	2900314	2900314	8553170	2	109,240,	0,452,
#Deleted in new
chr6_GL000255v2_alt	2903410	2907969	chr6_GL000255v2_alt:2903410-2907969	0	-	2903410	2907574	789624	7	236,75,54,197,118,121,79,	0,1087,1321,1609,1920,4056,4480,
#Deleted in new
chr6_GL000255v2_alt	2903410	2908169	chr6_GL000255v2_alt:2903410-2908169	0	-	2903410	2907574	789624	6	236,75,197,118,121,112,	0,1087,1609,1920,4056,4647,
#Deleted in new
chr6_GL000255v2_alt	2903410	2907731	chr6_GL000255v2_alt:2903410-2907731	0	-	2903410	2907574	789624	6	236,75,197,118,121,19,	0,1087,1609,1920,4056,4302,
#Deleted in new
chr6_GL000255v2_alt	2903412	2907964	chr6_GL000255v2_alt:2903412-2907964	0	-	2903412	2907574	789624	7	234,75,54,197,118,121,252,	0,1085,1319,1607,1918,4054,4300,
#Deleted in new
chr6_GL000255v2_alt	2903413	2908467	chr6_GL000255v2_alt:2903413-2908467	0	-	2903413	2907574	789624	6	233,75,197,118,121,249,	0,1084,1606,1917,4053,4805,
#Deleted in new
chr6_GL000255v2_alt	2903419	2907786	chr6_GL000255v2_alt:2903419-2907786	0	-	2903419	2907574	789624	7	227,75,54,197,118,121,110,	0,1078,1312,1600,1911,4047,4257,
#Deleted in new
chr6_GL000255v2_alt	2903423	2908486	chr6_GL000255v2_alt:2903423-2908486	0	-	2903423	2907574	789624	7	223,75,54,197,118,121,268,	0,1074,1308,1596,1907,4043,4795,
#Deleted in new
chr6_GL000255v2_alt	2903499	2908134	chr6_GL000255v2_alt:2903499-2908134	0	-	2903499	2907574	789624	6	147,75,197,118,121,89,	0,998,1520,1831,3967,4546,
#Deleted in new
chr6_GL000255v2_alt	2903518	2908464	chr6_GL000255v2_alt:2903518-2908464	0	-	2903518	2907574	789624	7	146,75,54,197,118,121,133,	0,979,1213,1501,1812,3948,4813,
#Deleted in new
chr6_GL000255v2_alt	2903525	2908264	chr6_GL000255v2_alt:2903525-2908264	0	-	2903525	2907574	789624	6	121,75,197,118,121,22,	0,972,1494,1805,3941,4717,
#Deleted in new
chr6_GL000255v2_alt	2903607	2907790	chr6_GL000255v2_alt:2903607-2907790	0	-	2903607	2907574	789624	6	39,75,54,197,118,324,	0,890,1124,1412,1723,3859,
#Deleted in new
chr6_GL000255v2_alt	2904548	2908133	chr6_GL000255v2_alt:2904548-2908133	0	-	2904548	2904548	8553170	6	24,54,219,118,121,76,	0,183,471,782,2918,3509,
#Deleted in new
chr6_GL000255v2_alt	2904732	2907926	chr6_GL000255v2_alt:2904732-2907926	0	-	2904732	2907574	789624	5	53,197,118,121,55,	0,287,598,2734,3139,
#Deleted in new
chr6_GL000255v2_alt	2905050	2908457	chr6_GL000255v2_alt:2905050-2908457	0	-	2905050	2905050	8553170	4	188,118,121,215,	0,280,2416,3192,
#Deleted in new
chr6_GL000255v2_alt	2908234	2913900	chr6_GL000255v2_alt:2908234-2913900	1	+	2912391	2913606	789624	5	136,155,74,99,458,	0,4055,4808,4963,5208,
#Deleted in new
chr6_GL000255v2_alt	2908235	2914028	chr6_GL000255v2_alt:2908235-2914028	3	+	2912391	2913907	0	6	135,155,74,99,99,147,	0,4054,4807,4962,5207,5646,
#Deleted in new
chr6_GL000255v2_alt	2911711	2914028	chr6_GL000255v2_alt:2911711-2914028	1	+	2911784	2913907	0	6	187,155,74,99,99,147,	0,578,1331,1486,1731,2170,
#Deleted in new
chr6_GL000255v2_alt	2914115	2916590	chr6_GL000255v2_alt:2914115-2916590	3	-	2914880	2915765	789624	1	2475,	0,
#Deleted in new
chr6_GL000255v2_alt	2914146	2916539	chr6_GL000255v2_alt:2914146-2916539	3	+	2914146	2914146	8553170	2	351,322,	0,2071,
#Deleted in new
chr6_GL000255v2_alt	2917046	2922107	chr6_GL000255v2_alt:2917046-2922107	3	-	2918088	2920302	789624	4	1487,725,163,423,	0,2630,3618,4638,
#Deleted in new
chr6_GL000255v2_alt	2917898	2921454	chr6_GL000255v2_alt:2917898-2921454	1	-	2918088	2920302	789624	4	635,728,163,72,	0,1778,2766,3484,
#Deleted in new
chr6_GL000255v2_alt	2917898	2921685	chr6_GL000255v2_alt:2917898-2921685	1	-	2918088	2920302	789624	4	635,728,163,288,	0,1778,2766,3499,
#Deleted in new
chr6_GL000255v2_alt	2917898	2921214	chr6_GL000255v2_alt:2917898-2921214	1	-	2918088	2920302	789624	3	635,725,550,	0,1778,2766,
#Deleted in new
chr6_GL000255v2_alt	2917898	2921674	chr6_GL000255v2_alt:2917898-2921674	1	-	2918088	2920302	789624	4	635,725,163,277,	0,1778,2766,3499,
#Deleted in new
chr6_GL000255v2_alt	2919111	2919225	chr6_GL000255v2_alt:2919111-2919225	3	+	2919111	2919111	8553170	1	114,	0,
#Deleted in new
chr6_GL000255v2_alt	2919706	2921621	chr6_GL000255v2_alt:2919706-2921621	0	-	2919706	2920302	789624	3	695,67,224,	0,958,1691,
#Deleted in new
chr6_GL000255v2_alt	2919808	2921266	chr6_GL000255v2_alt:2919808-2921266	0	-	2919808	2920302	789624	3	596,163,43,	0,856,1415,
#Deleted in new
chr6_GL000255v2_alt	2919846	2921014	chr6_GL000255v2_alt:2919846-2921014	0	-	2919846	2920302	789624	3	558,163,101,	0,818,1067,
#Deleted in new
chr6_GL000255v2_alt	2919981	2921658	chr6_GL000255v2_alt:2919981-2921658	0	-	2919981	2920302	789624	3	423,67,261,	0,683,1416,
#Deleted in new
chr6_GL000255v2_alt	2920033	2921009	chr6_GL000255v2_alt:2920033-2921009	0	-	2920033	2920302	789624	3	368,163,96,	0,631,880,
#Deleted in new
chr6_GL000255v2_alt	2921059	2925894	chr6_GL000255v2_alt:2921059-2925894	1	+	2921271	2925750	789624	7	258,83,103,116,76,190,235,	0,1585,2632,3303,3861,4083,4600,
#Deleted in new
chr6_GL000255v2_alt	2921703	2928106	chr6_GL000255v2_alt:2921703-2928106	1	+	2922655	2928106	789624	5	329,83,103,77,234,	0,941,1988,2659,6169,
#Deleted in new
chr6_GL000255v2_alt	2921703	2928106	chr6_GL000255v2_alt:2921703-2928106	1	+	2922655	2928106	789624	7	329,83,103,116,76,129,419,	0,941,1988,2659,3217,5276,5984,
#Deleted in new
chr6_GL000255v2_alt	2921887	2925894	chr6_GL000255v2_alt:2921887-2925894	1	+	2922655	2925750	0	7	145,83,103,116,76,190,235,	0,757,1804,2475,3033,3255,3772,
#Deleted in new
chr6_GL000255v2_alt	2921904	2926167	chr6_GL000255v2_alt:2921904-2926167	0	+	2921904	2921904	8553170	5	128,83,103,970,508,	0,740,1787,2458,3755,
#Deleted in new
chr6_GL000255v2_alt	2921910	2924065	chr6_GL000255v2_alt:2921910-2924065	0	+	2921910	2921910	8553170	3	122,83,374,	0,734,1781,
#Deleted in new
chr6_GL000255v2_alt	2921917	2925288	chr6_GL000255v2_alt:2921917-2925288	0	+	2921917	2921917	8553170	5	115,83,103,116,368,	0,727,1774,2445,3003,
#Deleted in new
chr6_GL000255v2_alt	2921921	2925894	chr6_GL000255v2_alt:2921921-2925894	0	+	2921921	2921921	8553170	7	111,83,121,116,76,190,235,	0,723,1752,2441,2999,3221,3738,
#Deleted in new
chr6_GL000255v2_alt	2921925	2929370	chr6_GL000255v2_alt:2921925-2929370	3	+	2922655	2927688	789624	8	107,83,103,116,76,190,129,1683,	0,719,1766,2437,2995,3217,5054,5762,
#Deleted in new
chr6_GL000255v2_alt	2922115	2925894	chr6_GL000255v2_alt:2922115-2925894	1	+	2922655	2925750	0	7	105,83,103,116,76,190,235,	0,529,1576,2247,2805,3027,3544,
#Deleted in new
chr6_GL000255v2_alt	2922178	2925894	chr6_GL000255v2_alt:2922178-2925894	1	+	2922655	2925750	0	7	133,83,103,116,76,190,235,	0,466,1513,2184,2742,2964,3481,
#Deleted in new
chr6_GL000255v2_alt	2922643	2928170	chr6_GL000255v2_alt:2922643-2928170	1	+	2922655	2927688	789624	7	84,103,116,76,190,129,483,	0,1048,1719,2277,2499,4336,5044,
#Deleted in new
chr6_GL000255v2_alt	2924941	2929370	chr6_GL000255v2_alt:2924941-2929370	3	+	2924941	2928106	789624	4	55,36,129,1683,	0,1855,2038,2746,
#Deleted in new
chr6_GL000255v2_alt	2926202	2929370	chr6_GL000255v2_alt:2926202-2929370	0	+	2926202	2926202	8553170	2	906,1683,	0,1485,
#Deleted in new
chr6_GL000255v2_alt	2926774	2929370	chr6_GL000255v2_alt:2926774-2929370	0	+	2926774	2928106	789624	3	58,129,1683,	0,205,913,
#Deleted in new
chr6_GL000255v2_alt	2932507	2936202	chr6_GL000255v2_alt:2932507-2936202	1	-	2932780	2936198	789624	3	437,168,125,	0,2418,3570,
#Deleted in new
chr6_GL000255v2_alt	2932507	2939860	chr6_GL000255v2_alt:2932507-2939860	2	-	2932780	2939860	789624	4	437,168,292,53,	0,2418,6362,7300,
#Deleted in new
chr6_GL000255v2_alt	2932507	2937300	chr6_GL000255v2_alt:2932507-2937300	0	-	2932507	2932507	8553170	3	437,168,247,	0,2418,4546,
#Deleted in new
chr6_GL000255v2_alt	2932507	2936189	chr6_GL000255v2_alt:2932507-2936189	0	-	2932507	2932507	8553170	2	437,1264,	0,2418,
#Deleted in new
chr6_GL000255v2_alt	2932507	2936189	chr6_GL000255v2_alt:2932507-2936189	0	-	2932507	2932507	8553170	3	437,168,206,	0,2418,3476,
#Deleted in new
chr6_GL000255v2_alt	2932507	2939860	chr6_GL000255v2_alt:2932507-2939860	0	-	2932507	2932507	8553170	4	437,168,172,53,	0,2418,4546,7300,
#Deleted in new
chr6_GL000255v2_alt	2932507	2939030	chr6_GL000255v2_alt:2932507-2939030	0	-	2932507	2932507	8553170	6	437,207,168,159,212,161,	0,1738,2418,4546,4962,6362,
#Deleted in new
chr6_GL000255v2_alt	2937171	2937784	chr6_GL000255v2_alt:2937171-2937784	0	-	2937171	2937171	8553170	2	54,315,	0,298,
#Deleted in new
chr6_GL000255v2_alt	2942772	2958905	chr6_GL000255v2_alt:2942772-2958905	1	-	2943035	2958600	789624	18	347,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,462,	0,549,693,875,1092,1300,1774,2066,2632,3129,3590,4630,4855,6078,6410,10006,14003,15671,
#Deleted in new
chr6_GL000255v2_alt	2942778	2944213	chr6_GL000255v2_alt:2942778-2944213	0	-	2942778	2942778	8553170	5	341,47,99,77,349,	0,543,687,869,1086,
#Deleted in new
chr6_GL000255v2_alt	2942778	2946426	chr6_GL000255v2_alt:2942778-2946426	0	-	2942778	2942778	8553170	10	341,47,99,77,63,57,397,124,50,64,	0,543,687,869,1086,1294,1768,2626,3123,3584,
#Deleted in new
chr6_GL000255v2_alt	2942779	2959248	chr6_GL000255v2_alt:2942779-2959248	1	-	2943035	2959113	789624	20	340,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,67,57,267,	0,542,686,868,1085,1293,1767,2059,2625,3122,3583,4623,4848,6071,6403,9999,13996,14328,15126,16202,
#Deleted in new
chr6_GL000255v2_alt	2942779	2959172	chr6_GL000255v2_alt:2942779-2959172	0	-	2942779	2942779	789624	19	340,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,57,191,	0,542,686,868,1085,1293,1767,2059,2625,3122,3583,4623,4848,6071,6403,9999,13996,15126,16202,
#Deleted in new
chr6_GL000255v2_alt	2942779	2958905	chr6_GL000255v2_alt:2942779-2958905	2	-	2942779	2942779	789624	20	340,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,67,57,462,	0,542,686,868,1085,1293,1767,2059,2625,3122,3583,4623,4848,6071,6403,9999,13996,14328,15126,15664,
#Deleted in new
chr6_GL000255v2_alt	2943210	2944145	chr6_GL000255v2_alt:2943210-2944145	0	-	2943210	2943210	8553170	4	158,99,77,281,	0,255,437,654,
#Deleted in new
chr6_GL000255v2_alt	2943398	2944127	chr6_GL000255v2_alt:2943398-2944127	0	-	2943398	2943398	8553170	3	166,77,263,	0,249,466,
#Deleted in new
chr6_GL000255v2_alt	2943476	2946069	chr6_GL000255v2_alt:2943476-2946069	0	-	2943476	2943476	8553170	8	88,77,63,57,64,105,124,168,	0,171,388,596,1070,1362,1928,2425,
#Deleted in new
chr6_GL000255v2_alt	2943596	2947470	chr6_GL000255v2_alt:2943596-2947470	0	-	2943596	2943596	8553170	8	128,265,64,105,124,50,64,68,	0,268,950,1242,1808,2305,2766,3806,
#Deleted in new
chr6_GL000255v2_alt	2944838	2959165	chr6_GL000255v2_alt:2944838-2959165	0	-	2944838	2944838	8553170	11	105,124,50,64,102,115,123,74,86,87,184,	0,566,1063,1524,2564,2789,4012,4344,7940,11937,14143,
#Deleted in new
chr6_GL000255v2_alt	2946379	2958698	chr6_GL000255v2_alt:2946379-2958698	0	-	2946379	2958600	789624	8	47,102,115,123,74,86,87,255,	0,1023,1248,2471,2803,6399,10396,12064,
#Deleted in new
chr6_GL000255v2_alt	2947269	2948880	chr6_GL000255v2_alt:2947269-2948880	0	-	2947269	2947269	8553170	3	235,115,30,	0,358,1581,
#Deleted in new
chr6_GL000255v2_alt	2947412	2948118	chr6_GL000255v2_alt:2947412-2948118	0	-	2947412	2947412	8553170	2	92,491,	0,215,
#Deleted in new
chr6_GL000255v2_alt	2962701	2966413	chr6_GL000255v2_alt:2962701-2966413	3	+	2962723	2966409	789624	6	74,330,264,156,67,29,	0,573,986,3142,3468,3683,
#Deleted in new
chr6_GL000255v2_alt	2962720	2973732	chr6_GL000255v2_alt:2962720-2973732	3	+	2962723	2973618	789624	6	55,330,264,156,123,338,	0,554,967,3123,8601,10674,
#Deleted in new
chr6_GL000255v2_alt	2968155	2969632	chr6_GL000255v2_alt:2968155-2969632	0	-	2968155	2968155	8553170	3	206,126,52,	0,328,1425,
#Deleted in new
chr6_GL000255v2_alt	2968155	2969632	chr6_GL000255v2_alt:2968155-2969632	3	-	2968160	2969632	789624	3	205,126,52,	0,328,1425,
#Deleted in new
chr6_GL000255v2_alt	2968160	2969632	chr6_GL000255v2_alt:2968160-2969632	0	-	2968358	2969632	789624	2	449,52,	0,1420,
#Deleted in new
chr6_GL000255v2_alt	2968160	2969632	chr6_GL000255v2_alt:2968160-2969632	0	-	2968358	2969632	789624	3	221,126,52,	0,323,1420,
#Deleted in new
chr6_GL000255v2_alt	2971175	2973618	chr6_GL000255v2_alt:2971175-2973618	0	+	2971175	2973618	789624	3	55,123,345,	0,146,2098,
#Deleted in new
chr6_GL000255v2_alt	2971175	2973618	chr6_GL000255v2_alt:2971175-2973618	0	+	2971175	2973618	789624	3	55,123,224,	0,146,2219,
#Deleted in new
chr6_GL000255v2_alt	2971175	2973618	chr6_GL000255v2_alt:2971175-2973618	0	+	2971175	2971175	8553170	2	269,224,	0,2219,
#Deleted in new
chr6_GL000255v2_alt	2974407	2982521	chr6_GL000255v2_alt:2974407-2982521	0	+	2974407	2974407	8553170	7	90,135,43,348,91,258,1741,	0,4407,4805,5042,5545,5990,6373,
#Deleted in new
chr6_GL000255v2_alt	2974461	2977659	chr6_GL000255v2_alt:2974461-2977659	3	-	2974909	2977493	789624	3	663,111,218,	0,1445,2980,
#Deleted in new
chr6_GL000255v2_alt	2974461	2977520	chr6_GL000255v2_alt:2974461-2977520	0	-	2974461	2974461	8553170	4	663,111,111,79,	0,1445,2305,2980,
#Deleted in new
chr6_GL000255v2_alt	2979183	2982521	chr6_GL000255v2_alt:2979183-2982521	3	+	2979194	2980854	789624	6	72,348,91,41,99,1741,	0,266,769,1214,1373,1597,
#Deleted in new
chr6_GL000255v2_alt	2979194	2982521	chr6_GL000255v2_alt:2979194-2982521	0	+	2979194	2980885	789624	4	61,348,80,1741,	0,255,1381,1586,
#Deleted in new
chr6_GL000255v2_alt	2979194	2982521	chr6_GL000255v2_alt:2979194-2982521	0	+	2979194	2980885	789624	5	61,348,41,99,1741,	0,255,1203,1362,1586,
#Deleted in new
chr6_GL000255v2_alt	2979194	2982521	chr6_GL000255v2_alt:2979194-2982521	0	+	2979194	2980854	789624	4	61,348,99,1741,	0,255,1362,1586,
#Deleted in new
chr6_GL000255v2_alt	2979194	2982521	chr6_GL000255v2_alt:2979194-2982521	0	+	2979194	2980885	789624	6	61,348,91,41,80,1741,	0,255,758,1203,1381,1586,
#Deleted in new
chr6_GL000255v2_alt	2979194	2982521	chr6_GL000255v2_alt:2979194-2982521	0	+	2979194	2979194	8553170	5	61,348,91,258,1741,	0,255,758,1203,1586,
#Deleted in new
chr6_GL000255v2_alt	2979194	2982521	chr6_GL000255v2_alt:2979194-2982521	0	+	2979194	2979194	8553170	5	61,348,91,41,1965,	0,255,758,1203,1362,
#Deleted in new
chr6_GL000255v2_alt	2982848	2986074	chr6_GL000255v2_alt:2982848-2986074	1	-	2983047	2984972	789624	7	316,150,120,74,100,357,213,	0,505,1135,1413,1608,1827,3013,
#Deleted in new
chr6_GL000255v2_alt	2982848	2985603	chr6_GL000255v2_alt:2982848-2985603	1	-	2983047	2984972	789624	6	316,150,120,74,100,928,	0,505,1135,1413,1608,1827,
#Deleted in new
chr6_GL000255v2_alt	2982848	2986428	chr6_GL000255v2_alt:2982848-2986428	1	-	2983047	2984972	789624	7	316,150,120,74,100,361,567,	0,505,1135,1413,1608,1827,3013,
#Deleted in new
chr6_GL000255v2_alt	2982848	2984688	chr6_GL000255v2_alt:2982848-2984688	0	-	2983007	2984688	789624	6	316,101,120,74,100,13,	0,505,1135,1413,1608,1827,
#Deleted in new
chr6_GL000255v2_alt	2982848	2986038	chr6_GL000255v2_alt:2982848-2986038	0	-	2982848	2982848	8553170	6	316,150,120,74,100,177,	0,505,1135,1413,1608,3013,
#Deleted in new
chr6_GL000255v2_alt	2982848	2985318	chr6_GL000255v2_alt:2982848-2985318	2	-	2982848	2982848	8553170	4	316,150,573,643,	0,505,1135,1827,
#Deleted in new
chr6_GL000255v2_alt	2982848	2986073	chr6_GL000255v2_alt:2982848-2986073	0	-	2982848	2982848	8553170	5	316,150,120,100,212,	0,505,1135,1608,3013,
#Deleted in new
chr6_GL000255v2_alt	2983385	2985607	chr6_GL000255v2_alt:2983385-2985607	0	-	2983385	2984972	789624	6	118,120,74,100,361,114,	0,598,876,1071,1290,2108,
#Deleted in new
chr6_GL000255v2_alt	2983418	2985312	chr6_GL000255v2_alt:2983418-2985312	0	-	2983418	2984972	789624	6	85,120,74,100,361,140,	0,565,843,1038,1257,1754,
#Deleted in new
chr6_GL000255v2_alt	2983991	2986056	chr6_GL000255v2_alt:2983991-2986056	0	-	2983991	2983991	8553170	3	565,361,195,	0,684,1870,
#Deleted in new
chr6_GL000255v2_alt	2986391	2992391	chr6_GL000255v2_alt:2986391-2992391	1	-	2986652	2992119	0	7	423,182,107,126,110,151,28,	0,1636,2985,3255,3573,5689,5972,
#Deleted in new
chr6_GL000255v2_alt	2986391	2993137	chr6_GL000255v2_alt:2986391-2993137	1	-	2986652	2992119	0	7	423,182,107,126,110,89,523,	0,1636,2985,3255,3573,5689,6223,
#Deleted in new
chr6_GL000255v2_alt	2986391	2992386	chr6_GL000255v2_alt:2986391-2992386	1	-	2986652	2992119	0	6	423,182,107,126,110,306,	0,1636,2985,3255,3573,5689,
#Deleted in new
chr6_GL000255v2_alt	2986391	2995582	chr6_GL000255v2_alt:2986391-2995582	3	-	2986652	2992119	0	8	423,182,107,126,110,89,125,35,	0,1636,2985,3255,3573,5689,8691,9156,
#Deleted in new
chr6_GL000255v2_alt	2986393	2992364	chr6_GL000255v2_alt:2986393-2992364	1	-	2986652	2992119	0	7	421,182,107,126,110,89,63,	0,1634,2983,3253,3571,5687,5908,
#Deleted in new
chr6_GL000255v2_alt	2995809	3000054	chr6_GL000255v2_alt:2995809-3000054	0	+	2996285	3000054	789624	8	72,27,160,124,81,63,122,45,	0,203,463,1172,2887,3118,3914,4200,
#Deleted in new
chr6_GL000255v2_alt	2995809	3000054	chr6_GL000255v2_alt:2995809-3000054	0	+	2996285	3000054	789624	8	72,27,160,124,81,63,122,45,	0,203,463,1172,2887,3118,3914,4200,
#Deleted in new
chr6_GL000255v2_alt	2995815	3017438	chr6_GL000255v2_alt:2995815-3017438	0	+	2996285	3017438	789624	22	66,160,124,81,63,122,110,36,83,46,139,63,129,73,110,81,88,190,127,150,75,144,	0,457,1166,2881,3112,3908,4194,4550,5238,7396,13310,13576,18172,18555,18773,19104,19432,19793,20097,20697,21195,21479,
#Deleted in new
chr6_GL000255v2_alt	2995818	3017438	chr6_GL000255v2_alt:2995818-3017438	0	+	2996285	3017438	789624	22	221,160,124,81,63,122,110,36,83,46,139,63,129,73,110,81,88,190,127,150,75,144,	0,454,1163,2878,3109,3905,4191,4547,5235,7393,13307,13573,18169,18552,18770,19101,19429,19790,20094,20694,21192,21476,
#Deleted in new
chr6_GL000255v2_alt	2995835	2999300	chr6_GL000255v2_alt:2995835-2999300	0	+	2995835	2995835	8553170	5	46,160,124,81,373,	0,437,1146,2861,3092,
#Deleted in new
chr6_GL000255v2_alt	2995838	3017438	chr6_GL000255v2_alt:2995838-3017438	0	+	2995838	2995838	789624	22	43,160,124,81,63,122,161,36,83,46,139,63,129,73,110,81,88,190,127,150,75,144,	0,434,1143,2858,3089,3885,4120,4527,5215,7373,13287,13553,18149,18532,18750,19081,19409,19770,20074,20674,21172,21456,
#Deleted in new
chr6_GL000255v2_alt	2995839	3017438	chr6_GL000255v2_alt:2995839-3017438	0	+	2996285	3017438	789624	22	42,160,124,81,63,122,110,36,83,46,139,63,129,73,110,81,88,190,127,150,78,144,	0,433,1142,2857,3088,3884,4170,4526,5214,7372,13286,13552,18148,18531,18749,19080,19408,19769,20073,20673,21168,21455,
#Deleted in new
chr6_GL000255v2_alt	2995839	3017438	chr6_GL000255v2_alt:2995839-3017438	1	+	2996285	3017438	789624	22	42,160,124,81,63,122,161,36,83,46,139,63,129,73,110,81,88,190,127,150,78,144,	0,433,1142,2857,3088,3884,4119,4526,5214,7372,13286,13552,18148,18531,18749,19080,19408,19769,20073,20673,21168,21455,
#Deleted in new
chr6_GL000255v2_alt	2995839	3014431	chr6_GL000255v2_alt:2995839-3014431	0	+	2995839	2995839	8553170	13	42,160,124,81,63,122,122,36,46,139,63,129,61,	0,433,1142,2857,3088,3884,4158,4526,7372,13286,13552,18148,18531,
#Deleted in new
chr6_GL000255v2_alt	2997064	3009865	chr6_GL000255v2_alt:2997064-3009865	0	+	2997064	2997064	8553170	9	41,81,63,122,110,36,46,139,474,	0,1632,1863,2659,2945,3301,6147,12061,12327,
#Deleted in new
chr6_GL000255v2_alt	2997077	3009172	chr6_GL000255v2_alt:2997077-3009172	0	+	2997077	3003236	789624	8	28,81,63,122,122,36,46,47,	0,1619,1850,2646,2920,3288,6134,12048,
#Deleted in new
chr6_GL000255v2_alt	2999797	3015314	chr6_GL000255v2_alt:2999797-3015314	0	+	2999797	3015314	789624	12	48,110,36,83,46,139,63,129,88,110,81,67,	0,212,568,1256,3414,9328,9594,14190,14558,14791,15122,15450,
#Deleted in new
chr6_GL000255v2_alt	3007318	3014957	chr6_GL000255v2_alt:3007318-3014957	0	+	3007318	3007318	8553170	6	158,139,63,129,110,38,	0,1807,2073,6669,7270,7601,
#Deleted in new
chr6_GL000255v2_alt	3012413	3017438	chr6_GL000255v2_alt:3012413-3017438	0	+	3013951	3017438	789624	11	325,873,73,110,81,88,190,127,150,75,144,	0,830,1957,2175,2506,2834,3195,3499,4099,4597,4881,
#Deleted in new
chr6_GL000255v2_alt	3012772	3012875	chr6_GL000255v2_alt:3012772-3012875	3	-	3012772	3012772	8553170	1	103,	0,
#Deleted in new
chr6_GL000255v2_alt	3014017	3015325	chr6_GL000255v2_alt:3014017-3015325	0	+	3014017	3014017	8553170	4	99,73,110,406,	0,353,571,902,
#Deleted in new
chr6_GL000255v2_alt	3014059	3015254	chr6_GL000255v2_alt:3014059-3015254	0	+	3014059	3015027	789624	4	57,73,110,335,	0,311,529,860,
#Deleted in new
chr6_GL000255v2_alt	3015267	3017438	chr6_GL000255v2_alt:3015267-3017438	0	+	3015267	3015267	8553170	6	68,190,127,150,75,144,	0,341,645,1245,1743,2027,
#Deleted in new
chr6_GL000255v2_alt	3015739	3017438	chr6_GL000255v2_alt:3015739-3017438	0	+	3015739	3017438	789624	4	59,127,75,144,	0,173,1271,1555,
#Deleted in new
chr6_GL000255v2_alt	3015739	3017580	chr6_GL000255v2_alt:3015739-3017580	0	+	3015739	3015739	8553170	5	59,127,75,144,8,	0,173,1271,1555,1833,
#Deleted in new
chr6_GL000255v2_alt	3016542	3017438	chr6_GL000255v2_alt:3016542-3017438	2	+	3016542	3016542	8553170	3	120,75,144,	0,468,752,
#Deleted in new
chr6_GL000255v2_alt	3017034	3017438	chr6_GL000255v2_alt:3017034-3017438	0	+	3017034	3017438	789624	2	51,144,	0,260,
#Deleted in new
chr6_GL000255v2_alt	3047436	3051780	chr6_GL000255v2_alt:3047436-3051780	3	-	3047436	3051044	789624	8	128,101,85,125,139,135,420,408,	0,261,607,782,1147,1376,3221,3936,
#Deleted in new
chr6_GL000255v2_alt	3047436	3048105	chr6_GL000255v2_alt:3047436-3048105	0	-	3047436	3047436	8553170	3	128,221,62,	0,261,607,
#Deleted in new
chr6_GL000255v2_alt	3047436	3048787	chr6_GL000255v2_alt:3047436-3048787	0	-	3047436	3047436	8553170	5	128,101,85,125,204,	0,261,607,782,1147,
#Deleted in new
chr6_GL000255v2_alt	3048812	3051326	chr6_GL000255v2_alt:3048812-3051326	0	-	3048812	3051044	789624	2	135,669,	0,1845,
#Deleted in new
chr6_GL000255v2_alt	3053221	3062802	chr6_GL000255v2_alt:3053221-3062802	3	-	3053582	3062575	0	5	487,60,31,68,230,	0,594,1080,8671,9351,
#Deleted in new
chr6_GL000255v2_alt	3053221	3062635	chr6_GL000255v2_alt:3053221-3062635	0	-	3053221	3053221	8553170	4	487,60,31,63,	0,594,1080,9351,
#Deleted in new
chr6_GL000255v2_alt	3053221	3062478	chr6_GL000255v2_alt:3053221-3062478	0	-	3053221	3053221	8553170	5	487,60,31,47,142,	0,594,1080,8671,9115,
#Deleted in new
chr6_GL000255v2_alt	3053221	3062477	chr6_GL000255v2_alt:3053221-3062477	0	-	3053221	3053221	8553170	5	487,60,31,68,174,	0,594,1080,8671,9082,
#Deleted in new
chr6_GL000255v2_alt	3053221	3062670	chr6_GL000255v2_alt:3053221-3062670	0	-	3053221	3053221	8553170	4	487,60,68,98,	0,594,8671,9351,
#Deleted in new
chr6_GL000255v2_alt	3053221	3062784	chr6_GL000255v2_alt:3053221-3062784	0	-	3053221	3053221	8553170	3	487,68,212,	0,8671,9351,
#Deleted in new
chr6_GL000255v2_alt	3058577	3062420	chr6_GL000255v2_alt:3058577-3062420	0	-	3058577	3058577	8553170	4	42,26,68,117,	0,128,3315,3726,
#Deleted in new
chr6_GL000255v2_alt	3065447	3070893	chr6_GL000255v2_alt:3065447-3070893	3	-	3065875	3067801	0	2	2367,177,	0,5269,
#Deleted in new
chr6_GL000255v2_alt	3071291	3073774	chr6_GL000255v2_alt:3071291-3073774	3	+	3071584	3073510	0	1	2483,	0,
#Deleted in new
chr6_GL000255v2_alt	3071370	3073774	chr6_GL000255v2_alt:3071370-3073774	1	+	3071584	3073510	789624	2	289,1620,	0,784,
#Deleted in new
chr6_GL000255v2_alt	3083566	3086091	chr6_GL000255v2_alt:3083566-3086091	3	+	3083782	3085708	0	1	2525,	0,
#Deleted in new
chr6_GL000255v2_alt	3083742	3086090	chr6_GL000255v2_alt:3083742-3086090	1	+	3083779	3085708	789624	1	2348,	0,
#Deleted in new
chr6_GL000255v2_alt	3090447	3095597	chr6_GL000255v2_alt:3090447-3095597	3	+	3093165	3095499	789624	4	593,41,200,219,	0,802,2625,4931,
#Deleted in new
chr6_GL000255v2_alt	3090466	3095597	chr6_GL000255v2_alt:3090466-3095597	1	+	3093165	3095499	789624	4	142,41,200,219,	0,783,2606,4912,
#Deleted in new
chr6_GL000255v2_alt	3090747	3095597	chr6_GL000255v2_alt:3090747-3095597	1	+	3093165	3095499	789624	5	293,41,94,200,219,	0,502,1513,2325,4631,
#Deleted in new
chr6_GL000255v2_alt	3090747	3095597	chr6_GL000255v2_alt:3090747-3095597	1	+	3093165	3095499	789624	4	150,41,200,219,	0,502,2325,4631,
#Deleted in new
chr6_GL000255v2_alt	3090747	3095597	chr6_GL000255v2_alt:3090747-3095597	1	+	3093165	3095499	789624	3	293,200,219,	0,2325,4631,
#Deleted in new
chr6_GL000255v2_alt	3090757	3095597	chr6_GL000255v2_alt:3090757-3095597	1	+	3093165	3095499	789624	5	283,41,219,200,219,	0,492,1378,2315,4621,
#Deleted in new
chr6_GL000255v2_alt	3090761	3095602	chr6_GL000255v2_alt:3090761-3095602	1	+	3093165	3095499	789624	4	279,45,200,224,	0,488,2311,4617,
#Deleted in new
chr6_GL000255v2_alt	3090771	3095597	chr6_GL000255v2_alt:3090771-3095597	1	+	3093165	3095499	789624	5	269,41,223,200,219,	0,478,1360,2301,4607,
#Deleted in new
chr6_GL000255v2_alt	3091102	3091165	chr6_GL000255v2_alt:3091102-3091165	3	+	3091102	3091102	789624	1	63,	0,
#Deleted in new
chr6_GL000255v2_alt	3091124	3095597	chr6_GL000255v2_alt:3091124-3095597	1	+	3093165	3095499	789624	3	166,200,219,	0,1948,4254,
#Deleted in new
chr6_GL000255v2_alt	3092679	3095600	chr6_GL000255v2_alt:3092679-3095600	1	+	3093165	3095499	789624	2	593,222,	0,2699,
#Deleted in new
chr6_GL000255v2_alt	3092912	3092979	chr6_GL000255v2_alt:3092912-3092979	3	+	3092912	3092912	789624	1	67,	0,
#Deleted in new
chr6_GL000255v2_alt	3113630	3118768	chr6_GL000255v2_alt:3113630-3118768	0	-	3113630	3113630	8553170	3	2287,2150,179,	0,2383,4959,
#Deleted in new
chr6_GL000255v2_alt	3115023	3118878	chr6_GL000255v2_alt:3115023-3118878	3	-	3115690	3118748	789624	6	894,223,183,263,193,289,	0,990,1387,2136,2947,3566,
#Deleted in new
chr6_GL000255v2_alt	3115023	3118788	chr6_GL000255v2_alt:3115023-3118788	0	-	3117362	3118748	789624	5	894,223,183,263,199,	0,990,1387,2136,3566,
#Deleted in new
chr6_GL000255v2_alt	3115023	3118794	chr6_GL000255v2_alt:3115023-3118794	0	-	3116144	3118748	789624	6	894,137,183,263,193,205,	0,990,1387,2136,2947,3566,
#Deleted in new
chr6_GL000255v2_alt	3115023	3118777	chr6_GL000255v2_alt:3115023-3118777	0	-	3115023	3115023	8553170	4	1570,263,193,188,	0,2136,2947,3566,
#Deleted in new
chr6_GL000255v2_alt	3116206	3262692	chr6_GL000255v2_alt:3116206-3262692	0	+	3116206	3116206	8553170	5	6,210,90,174,102,	0,145443,145750,146103,146384,
#Deleted in new
chr6_GL000255v2_alt	3119163	3134974	chr6_GL000255v2_alt:3119163-3134974	1	-	3119598	3134953	789624	21	557,85,95,71,74,104,95,254,103,93,100,236,84,88,61,126,100,79,74,49,61,	0,1461,1625,1819,2124,2307,2499,2682,5961,6351,7409,7618,8120,8280,11269,11530,11738,12661,12865,13843,15750,
#Deleted in new
chr6_GL000255v2_alt	3119166	3133644	chr6_GL000255v2_alt:3119166-3133644	1	-	3119598	3131838	789624	21	554,85,95,71,74,104,95,254,103,93,100,236,84,88,61,126,100,79,74,49,109,	0,1458,1622,1816,2121,2304,2496,2679,5958,6348,7406,7615,8117,8277,11266,11527,11735,12658,12862,13840,14369,
#Deleted in new
chr6_GL000255v2_alt	3119166	3135019	chr6_GL000255v2_alt:3119166-3135019	3	-	3119598	3134953	789624	20	554,85,95,71,74,104,95,254,103,93,100,236,84,88,61,100,79,74,49,106,	0,1458,1622,1816,2121,2304,2496,2679,5958,6348,7406,7615,8117,8277,11266,11735,12658,12862,13840,15747,
#Deleted in new
chr6_GL000255v2_alt	3121662	3134940	chr6_GL000255v2_alt:3121662-3134940	0	-	3121662	3134940	789624	13	95,254,103,93,84,88,61,126,100,79,74,49,27,	0,183,3462,3852,5621,5781,8770,9031,9239,10162,10366,11344,13251,
#Deleted in new
chr6_GL000255v2_alt	3122031	3127172	chr6_GL000255v2_alt:3122031-3127172	0	-	3122031	3122031	8553170	4	68,103,93,391,	0,3093,3483,4750,
#Deleted in new
chr6_GL000255v2_alt	3125565	3127214	chr6_GL000255v2_alt:3125565-3127214	0	-	3125565	3125565	8553170	3	42,100,433,	0,1007,1216,
#Deleted in new
chr6_GL000255v2_alt	3130497	3134970	chr6_GL000255v2_alt:3130497-3134970	0	-	3130497	3130497	8553170	6	322,100,79,74,49,57,	0,404,1327,1531,2509,4416,
#Deleted in new
chr6_GL000255v2_alt	3130794	3134970	chr6_GL000255v2_alt:3130794-3134970	0	-	3130794	3130794	8553170	6	25,100,121,74,49,57,	0,107,988,1234,2212,4119,
#Deleted in new
chr6_GL000255v2_alt	3135731	3153649	chr6_GL000255v2_alt:3135731-3153649	1	-	3136056	3153649	0	27	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,115,135,156,41,85,254,219,67,42,	0,914,1255,2939,3134,3602,4046,4632,4885,5152,6821,7015,7235,7817,8019,8281,8603,8839,9468,9708,12647,12934,13066,16503,16846,17163,17876,
#Deleted in new
chr6_GL000255v2_alt	3135731	3153671	chr6_GL000255v2_alt:3135731-3153671	3	-	3136056	3153649	0	28	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,102,115,135,156,41,85,254,219,67,64,	0,914,1255,2939,3134,3602,4046,4632,4885,5152,6821,7015,7235,7817,8019,8281,8603,8839,9209,9468,9708,12647,12934,13066,16503,16846,17163,17876,
#Deleted in new
chr6_GL000255v2_alt	3135731	3153174	chr6_GL000255v2_alt:3135731-3153174	1	-	3136056	3153174	789624	27	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,102,115,135,156,41,85,254,219,280,	0,914,1255,2939,3134,3602,4046,4632,4885,5152,6821,7015,7235,7817,8019,8281,8603,8839,9209,9468,9708,12647,12934,13066,16503,16846,17163,
#Deleted in new
chr6_GL000255v2_alt	3135731	3153194	chr6_GL000255v2_alt:3135731-3153194	1	-	3136056	3153174	789624	26	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,115,135,156,41,85,254,219,300,	0,914,1255,2939,3134,3602,4046,4632,4885,5152,6821,7015,7235,7817,8019,8281,8603,8839,9468,9708,12647,12934,13066,16503,16846,17163,
#Deleted in new
chr6_GL000255v2_alt	3135731	3141113	chr6_GL000255v2_alt:3135731-3141113	0	-	3135731	3135731	8553170	9	506,176,79,87,116,78,145,408,230,	0,914,1255,2939,3134,3602,4046,4632,5152,
#Deleted in new
chr6_GL000255v2_alt	3135731	3142409	chr6_GL000255v2_alt:3135731-3142409	0	-	3135731	3135731	8553170	10	506,176,79,87,116,78,145,168,155,1526,	0,914,1255,2939,3134,3602,4046,4632,4885,5152,
#Deleted in new
chr6_GL000255v2_alt	3135731	3153178	chr6_GL000255v2_alt:3135731-3153178	0	-	3135731	3135731	8553170	28	506,176,79,87,116,78,145,168,155,126,102,123,107,83,183,236,144,149,102,115,135,156,41,85,301,254,219,284,	0,914,1255,2939,3134,3602,4046,4632,4885,5131,6821,7015,7235,7817,8019,8281,8603,8839,9209,9468,9708,12647,12934,13066,13602,16503,16846,17163,
#Deleted in new
chr6_GL000255v2_alt	3135731	3140778	chr6_GL000255v2_alt:3135731-3140778	0	-	3135731	3135731	8553170	9	506,176,79,87,116,78,145,168,162,	0,914,1255,2939,3134,3602,4046,4632,4885,
#Deleted in new
chr6_GL000255v2_alt	3139732	3140026	chr6_GL000255v2_alt:3139732-3140026	3	+	3139732	3139732	8553170	2	51,172,	0,122,
#Deleted in new
chr6_GL000255v2_alt	3139790	3143036	chr6_GL000255v2_alt:3139790-3143036	0	-	3139790	3143036	789624	7	132,168,155,144,102,123,70,	0,573,826,1093,2762,2956,3176,
#Deleted in new
chr6_GL000255v2_alt	3140644	3143091	chr6_GL000255v2_alt:3140644-3143091	0	-	3140644	3140644	8553170	4	127,105,102,345,	0,239,1908,2102,
#Deleted in new
chr6_GL000255v2_alt	3148389	3149158	chr6_GL000255v2_alt:3148389-3149158	0	-	3148389	3148389	8553170	3	145,41,361,	0,276,408,
#Deleted in new
chr6_GL000255v2_alt	3151372	3153659	chr6_GL000255v2_alt:3151372-3153659	0	-	3151372	3151372	8553170	4	1116,219,67,52,	0,1205,1522,2235,
#Deleted in new
chr6_GL000255v2_alt	3153756	3201649	chr6_GL000255v2_alt:3153756-3201649	3	+	3189646	3201332	789624	14	158,174,139,141,90,141,95,112,166,77,92,127,50,497,	0,35827,38140,39536,41448,45177,45443,45634,45862,46135,46353,46945,47198,47396,
#Deleted in new
chr6_GL000255v2_alt	3153758	3201647	chr6_GL000255v2_alt:3153758-3201647	0	+	3153758	3153758	8553170	15	156,174,99,139,141,90,141,95,112,166,77,92,127,54,495,	0,35825,36082,38138,39534,41446,45175,45441,45632,45860,46133,46351,46943,47192,47394,
#Deleted in new
chr6_GL000255v2_alt	3155579	3157967	chr6_GL000255v2_alt:3155579-3157967	3	-	3155898	3157278	789624	2	1719,158,	0,2230,
#Deleted in new
chr6_GL000255v2_alt	3156971	3195225	chr6_GL000255v2_alt:3156971-3195225	0	+	3157039	3195225	789624	5	141,174,99,141,21,	0,32612,32869,36321,38233,
#Deleted in new
chr6_GL000255v2_alt	3156971	3201649	chr6_GL000255v2_alt:3156971-3201649	1	+	3157039	3201332	0	14	141,174,99,141,90,141,95,112,166,77,92,127,50,497,	0,32612,32869,36321,38233,41962,42228,42419,42647,42920,43138,43730,43983,44181,
#Deleted in new
chr6_GL000255v2_alt	3156976	3190269	chr6_GL000255v2_alt:3156976-3190269	0	+	3157039	3190269	789624	4	136,174,99,130,	0,32607,32864,33163,
#Deleted in new
chr6_GL000255v2_alt	3175914	3193433	chr6_GL000255v2_alt:3175914-3193433	0	+	3175914	3175914	8553170	6	86,174,99,134,139,141,	0,13669,13926,14225,15982,17378,
#Deleted in new
chr6_GL000255v2_alt	3175957	3184868	chr6_GL000255v2_alt:3175957-3184868	0	+	3183726	3184868	789624	4	43,145,210,163,	0,7670,7971,8748,
#Deleted in new
chr6_GL000255v2_alt	3176069	3191964	chr6_GL000255v2_alt:3176069-3191964	0	+	3176069	3176069	8553170	5	67,174,99,134,68,	0,13514,13771,14070,15827,
#Deleted in new
chr6_GL000255v2_alt	3183450	3201649	chr6_GL000255v2_alt:3183450-3201649	1	+	3183997	3201332	789624	18	322,238,186,174,99,134,139,141,90,141,95,112,166,77,92,127,50,497,	0,478,1255,6133,6390,6689,8446,9842,11754,15483,15749,15940,16168,16441,16659,17251,17504,17702,
#Deleted in new
chr6_GL000255v2_alt	3183450	3201649	chr6_GL000255v2_alt:3183450-3201649	1	+	3183726	3201332	0	16	322,174,99,134,139,141,90,141,95,112,166,77,92,127,50,497,	0,6133,6390,6689,8446,9842,11754,15483,15749,15940,16168,16441,16659,17251,17504,17702,
#Deleted in new
chr6_GL000255v2_alt	3183465	3201647	chr6_GL000255v2_alt:3183465-3201647	1	+	3183726	3201332	0	18	307,210,186,174,99,134,139,141,90,141,95,112,166,77,92,127,50,495,	0,463,1240,6118,6375,6674,8431,9827,11739,15468,15734,15925,16153,16426,16644,17236,17489,17687,
#Deleted in new
chr6_GL000255v2_alt	3183498	3189704	chr6_GL000255v2_alt:3183498-3189704	0	+	3183726	3189704	789624	3	274,210,121,	0,430,6085,
#Deleted in new
chr6_GL000255v2_alt	3183504	3199294	chr6_GL000255v2_alt:3183504-3199294	0	+	3183726	3199294	789624	9	268,174,99,134,139,141,90,141,95,	0,6079,6336,6635,8392,9788,11700,15429,15695,
#Deleted in new
chr6_GL000255v2_alt	3183676	3191032	chr6_GL000255v2_alt:3183676-3191032	0	+	3183676	3183676	8553170	6	96,210,186,174,99,893,	0,252,1029,5907,6164,6463,
#Deleted in new
chr6_GL000255v2_alt	3183736	3201647	chr6_GL000255v2_alt:3183736-3201647	1	+	3183738	3201332	789624	14	36,174,99,141,90,141,95,112,166,77,92,127,50,495,	0,5847,6104,9556,11468,15197,15463,15654,15882,16155,16373,16965,17218,17416,
#Deleted in new
chr6_GL000255v2_alt	3188321	3190256	chr6_GL000255v2_alt:3188321-3190256	0	+	3188321	3188321	8553170	4	146,174,99,117,	0,1262,1519,1818,
#Deleted in new
chr6_GL000255v2_alt	3190256	3199733	chr6_GL000255v2_alt:3190256-3199733	0	+	3190256	3190256	8553170	8	17,139,141,90,185,95,112,115,	0,1640,3036,4948,8633,8943,9134,9362,
#Deleted in new
chr6_GL000255v2_alt	3190422	3197688	chr6_GL000255v2_alt:3190422-3197688	3	-	3190422	3190422	789624	3	184,63,530,	0,891,6736,
#Deleted in new
chr6_GL000255v2_alt	3192028	3201647	chr6_GL000255v2_alt:3192028-3201647	0	+	3192028	3192028	8553170	10	1405,90,141,95,112,166,77,92,127,495,	0,3176,6905,7171,7362,7590,7863,8081,8673,9124,
#Deleted in new
chr6_GL000255v2_alt	3199647	3201647	chr6_GL000255v2_alt:3199647-3201647	0	+	3199647	3199647	8553170	6	137,77,92,127,50,211,	0,244,462,1054,1307,1789,
#Deleted in new
chr6_GL000255v2_alt	3201624	3208059	chr6_GL000255v2_alt:3201624-3208059	3	+	3202196	3208005	0	19	51,166,234,186,174,102,137,139,132,102,138,98,118,154,77,101,133,50,210,	0,470,723,1357,1698,2092,2295,2724,3180,3593,3770,4400,4636,4969,5218,5494,5691,5905,6225,
#Deleted in new
chr6_GL000255v2_alt	3201968	3208059	chr6_GL000255v2_alt:3201968-3208059	1	+	3202196	3208005	0	18	292,234,186,174,102,137,139,132,102,138,98,118,154,77,101,133,50,210,	0,379,1013,1354,1748,1951,2380,2836,3249,3426,4056,4292,4625,4874,5150,5347,5561,5881,
#Deleted in new
chr6_GL000255v2_alt	3202071	3202843	chr6_GL000255v2_alt:3202071-3202843	0	+	3202071	3202071	8553170	2	189,496,	0,276,
#Deleted in new
chr6_GL000255v2_alt	3202100	3203818	chr6_GL000255v2_alt:3202100-3203818	0	+	3202100	3202100	8553170	5	160,121,186,174,102,	0,360,881,1222,1616,
#Deleted in new
chr6_GL000255v2_alt	3202196	3206620	chr6_GL000255v2_alt:3202196-3206620	0	+	3202196	3202196	8553170	12	64,234,186,174,102,137,139,132,102,138,98,360,	0,151,785,1126,1520,1723,2152,2608,3021,3198,3828,4064,
#Deleted in new
chr6_GL000255v2_alt	3203255	3205526	chr6_GL000255v2_alt:3203255-3205526	0	+	3203255	3203255	8553170	6	241,102,568,132,102,132,	0,461,664,1549,1962,2139,
#Deleted in new
chr6_GL000255v2_alt	3203771	3205573	chr6_GL000255v2_alt:3203771-3205573	0	+	3203771	3203771	8553170	6	47,137,139,132,102,179,	0,148,577,1033,1446,1623,
#Deleted in new
chr6_GL000255v2_alt	3204332	3205573	chr6_GL000255v2_alt:3204332-3205573	0	+	3204332	3204332	8553170	4	155,132,102,179,	0,472,885,1062,
#Deleted in new
chr6_GL000255v2_alt	3204972	3205573	chr6_GL000255v2_alt:3204972-3205573	0	+	3204972	3204972	8553170	2	347,179,	0,422,
#Deleted in new
chr6_GL000255v2_alt	3205705	3207219	chr6_GL000255v2_alt:3205705-3207219	0	+	3205705	3205705	8553170	4	417,487,77,101,	0,555,1137,1413,
#Deleted in new
chr6_GL000255v2_alt	3206848	3208059	chr6_GL000255v2_alt:3206848-3208059	0	+	3206848	3206848	8553170	4	371,133,50,210,	0,467,681,1001,
#Deleted in new
chr6_GL000255v2_alt	3207389	3208059	chr6_GL000255v2_alt:3207389-3208059	0	+	3207389	3207389	8553170	2	59,530,	0,140,
#Deleted in new
chr6_GL000255v2_alt	3208061	3215062	chr6_GL000255v2_alt:3208061-3215062	3	-	3208275	3214416	0	11	312,103,55,145,338,38,75,146,70,83,201,	0,1642,1993,2211,2468,2972,3132,4601,4849,6280,6800,
#Deleted in new
chr6_GL000255v2_alt	3208202	3214914	chr6_GL000255v2_alt:3208202-3214914	0	-	3208202	3208202	8553170	10	171,406,145,338,38,75,146,70,83,53,	0,1501,2070,2327,2831,2991,4460,4708,6139,6659,
#Deleted in new
chr6_GL000255v2_alt	3208202	3214889	chr6_GL000255v2_alt:3208202-3214889	0	-	3208202	3208202	8553170	9	171,103,55,145,542,75,146,70,548,	0,1501,1852,2070,2327,2991,4460,4708,6139,
#Deleted in new
chr6_GL000255v2_alt	3209732	3214927	chr6_GL000255v2_alt:3209732-3214927	0	-	3209732	3214416	789624	10	74,55,145,323,38,75,146,70,83,66,	0,322,540,797,1301,1461,2930,3178,4609,5129,
#Deleted in new
chr6_GL000255v2_alt	3210278	3214449	chr6_GL000255v2_alt:3210278-3214449	0	-	3210278	3214416	789624	7	139,338,38,75,146,70,108,	0,251,755,915,2384,2632,4063,
#Deleted in new
chr6_GL000255v2_alt	3210534	3214541	chr6_GL000255v2_alt:3210534-3214541	0	-	3210534	3214416	789624	6	318,38,75,146,70,200,	0,499,659,2128,2376,3807,
#Deleted in new
chr6_GL000255v2_alt	3210724	3215008	chr6_GL000255v2_alt:3210724-3215008	0	-	3210724	3210724	8553170	6	347,75,146,70,83,147,	0,469,1938,2186,3617,4137,
#Deleted in new
chr6_GL000255v2_alt	3210747	3214938	chr6_GL000255v2_alt:3210747-3214938	0	-	3210747	3210747	8553170	7	30,38,75,146,70,147,77,	0,286,446,1915,2163,3530,4114,
#Deleted in new
chr6_GL000255v2_alt	3210794	3214829	chr6_GL000255v2_alt:3210794-3214829	0	-	3210794	3214416	789624	7	73,38,75,146,70,83,280,	0,239,399,1868,2116,3547,3755,
#Deleted in new
chr6_GL000255v2_alt	3211039	3214935	chr6_GL000255v2_alt:3211039-3214935	0	-	3211039	3211039	8553170	5	32,75,318,83,74,	0,154,1623,3302,3822,
#Deleted in new
chr6_GL000255v2_alt	3211193	3214924	chr6_GL000255v2_alt:3211193-3214924	0	-	3211193	3211193	8553170	6	75,146,70,118,83,63,	0,1469,1717,2094,3148,3668,
#Deleted in new
chr6_GL000255v2_alt	3213369	3214416	chr6_GL000255v2_alt:3213369-3214416	1	-	3213369	3214416	789624	2	36,75,	0,972,
#Deleted in new
chr6_GL000255v2_alt	3215049	3225721	chr6_GL000255v2_alt:3215049-3225721	1	+	3215162	3225685	789624	28	135,104,110,118,115,75,54,191,129,146,147,85,107,147,97,213,111,231,138,138,105,148,127,211,111,219,141,237,	0,217,930,1140,1352,1586,1961,2116,2467,2829,3359,3634,3905,4333,4557,4833,5152,6703,7629,7924,8193,8635,8876,9248,9606,9791,10200,10435,
#Deleted in new
chr6_GL000255v2_alt	3215086	3217356	chr6_GL000255v2_alt:3215086-3217356	0	+	3215086	3215086	8553170	8	98,104,110,118,115,75,54,46,	0,180,893,1103,1315,1549,1924,2224,
#Deleted in new
chr6_GL000255v2_alt	3215108	3218553	chr6_GL000255v2_alt:3215108-3218553	2	+	3215108	3215108	8553170	5	76,46,129,146,145,	0,2202,2408,2770,3300,
#Deleted in new
chr6_GL000255v2_alt	3215117	3225721	chr6_GL000255v2_alt:3215117-3225721	0	+	3215117	3215117	8553170	23	67,104,110,118,115,75,635,146,147,378,147,97,213,111,231,138,138,105,148,127,211,467,472,	0,149,862,1072,1284,1518,1893,2761,3291,3566,4265,4489,4765,5084,6635,7561,7856,8125,8567,8808,9180,9475,10132,
#Deleted in new
chr6_GL000255v2_alt	3215160	3215928	chr6_GL000255v2_alt:3215160-3215928	0	+	3215160	3215160	8553170	2	24,662,	0,106,
#Deleted in new
chr6_GL000255v2_alt	3215162	3217195	chr6_GL000255v2_alt:3215162-3217195	1	+	3215162	3217195	789624	4	22,104,54,30,	0,104,1848,2003,
#Deleted in new
chr6_GL000255v2_alt	3217466	3218980	chr6_GL000255v2_alt:3217466-3218980	0	+	3217466	3217466	8553170	5	179,146,147,85,26,	0,412,942,1217,1488,
#Deleted in new
chr6_GL000255v2_alt	3222797	3224414	chr6_GL000255v2_alt:3222797-3224414	0	+	3222797	3222797	8553170	6	19,138,105,148,168,113,	0,176,445,887,1128,1504,
#Deleted in new
chr6_GL000255v2_alt	3222990	3224418	chr6_GL000255v2_alt:3222990-3224418	0	+	3222990	3222990	8553170	4	121,105,148,493,	0,252,694,935,
#Deleted in new
chr6_GL000255v2_alt	3223072	3224956	chr6_GL000255v2_alt:3223072-3224956	0	+	3223072	3223072	8553170	6	39,105,148,127,211,301,	0,170,612,853,1225,1583,
#Deleted in new
chr6_GL000255v2_alt	3224292	3225721	chr6_GL000255v2_alt:3224292-3225721	0	+	3224292	3224292	8553170	4	139,189,141,237,	0,578,957,1192,
#Deleted in new
chr6_GL000255v2_alt	3224423	3225378	chr6_GL000255v2_alt:3224423-3225378	0	+	3224423	3224423	8553170	3	85,111,538,	0,232,417,
#Deleted in new
chr6_GL000255v2_alt	3224444	3225721	chr6_GL000255v2_alt:3224444-3225721	0	+	3224444	3224444	8553170	4	64,111,219,472,	0,211,396,805,
#Deleted in new
chr6_GL000255v2_alt	3224449	3225721	chr6_GL000255v2_alt:3224449-3225721	0	+	3224449	3224449	8553170	4	59,174,219,472,	0,143,391,800,
#Deleted in new
chr6_GL000255v2_alt	3224655	3225721	chr6_GL000255v2_alt:3224655-3225721	0	+	3224655	3224655	8553170	4	111,219,37,237,	0,185,594,829,
#Deleted in new
chr6_GL000255v2_alt	3225779	3228262	chr6_GL000255v2_alt:3225779-3228262	1	-	3225846	3227645	789624	7	215,95,136,220,236,362,364,	0,299,533,796,1102,1510,2119,
#Deleted in new
chr6_GL000255v2_alt	3225779	3227941	chr6_GL000255v2_alt:3225779-3227941	3	-	3225846	3227645	789624	6	215,95,136,220,236,652,	0,299,533,796,1102,1510,
#Deleted in new
chr6_GL000255v2_alt	3225779	3228106	chr6_GL000255v2_alt:3225779-3228106	1	-	3225846	3227645	789624	7	215,95,136,220,236,406,208,	0,299,533,796,1102,1510,2119,
#Deleted in new
chr6_GL000255v2_alt	3225779	3226827	chr6_GL000255v2_alt:3225779-3226827	0	-	3225779	3225779	8553170	4	215,95,36,265,	0,299,533,783,
#Deleted in new
chr6_GL000255v2_alt	3225779	3228222	chr6_GL000255v2_alt:3225779-3228222	0	-	3225779	3225779	8553170	4	215,95,136,1647,	0,299,533,796,
#Deleted in new
chr6_GL000255v2_alt	3225779	3227655	chr6_GL000255v2_alt:3225779-3227655	0	-	3225779	3225779	8553170	5	215,95,483,236,366,	0,299,533,1102,1510,
#Deleted in new
chr6_GL000255v2_alt	3225779	3228179	chr6_GL000255v2_alt:3225779-3228179	0	-	3225779	3225779	8553170	5	215,95,136,542,890,	0,299,533,796,1510,
#Deleted in new
chr6_GL000255v2_alt	3225779	3228065	chr6_GL000255v2_alt:3225779-3228065	0	-	3225779	3225779	8553170	3	215,1039,776,	0,299,1510,
#Deleted in new
chr6_GL000255v2_alt	3225779	3227653	chr6_GL000255v2_alt:3225779-3227653	0	-	3225779	3225779	8553170	2	1338,364,	0,1510,
#Deleted in new
chr6_GL000255v2_alt	3225779	3228208	chr6_GL000255v2_alt:3225779-3228208	0	-	3225779	3225779	8553170	6	215,95,136,147,236,310,	0,299,533,796,1102,2119,
#Deleted in new
chr6_GL000255v2_alt	3226353	3228106	chr6_GL000255v2_alt:3226353-3228106	0	-	3226353	3226353	8553170	5	95,147,236,406,208,	0,222,528,936,1545,
#Deleted in new
chr6_GL000255v2_alt	3226580	3228068	chr6_GL000255v2_alt:3226580-3228068	0	-	3226580	3226580	8553170	4	142,228,262,170,	0,301,709,1318,
#Deleted in new
chr6_GL000255v2_alt	3226612	3227959	chr6_GL000255v2_alt:3226612-3227959	0	-	3226612	3226612	8553170	3	110,236,670,	0,269,677,
#Deleted in new
chr6_GL000255v2_alt	3226871	3227979	chr6_GL000255v2_alt:3226871-3227979	0	-	3226871	3226871	8553170	3	246,406,81,	0,418,1027,
#Deleted in new
chr6_GL000255v2_alt	3227144	3234981	chr6_GL000255v2_alt:3227144-3234981	0	+	3227144	3227144	8553170	4	100,643,137,108,	0,694,1446,7729,
#Deleted in new
chr6_GL000255v2_alt	3227144	3237416	chr6_GL000255v2_alt:3227144-3237416	1	+	3228180	3237020	789624	8	100,643,137,96,140,98,148,442,	0,694,1446,7729,8240,9277,9480,9830,
#Deleted in new
chr6_GL000255v2_alt	3227838	3237417	chr6_GL000255v2_alt:3227838-3237417	1	+	3227966	3237020	789624	8	348,210,137,96,140,98,148,443,	0,433,752,7035,7546,8583,8786,9136,
#Deleted in new
chr6_GL000255v2_alt	3227913	3237417	chr6_GL000255v2_alt:3227913-3237417	1	+	3227966	3237020	789624	8	273,210,137,108,140,98,148,443,	0,358,677,6960,7471,8508,8711,9061,
#Deleted in new
chr6_GL000255v2_alt	3228309	3237417	chr6_GL000255v2_alt:3228309-3237417	2	+	3228309	3228309	8553170	6	172,137,96,1135,148,443,	0,281,6564,7075,8315,8665,
#Deleted in new
chr6_GL000255v2_alt	3228322	3237417	chr6_GL000255v2_alt:3228322-3237417	0	+	3228322	3228322	8553170	3	159,80,443,	0,8370,8652,
#Deleted in new
chr6_GL000255v2_alt	3228350	3238792	chr6_GL000255v2_alt:3228350-3238792	3	+	3228350	3234953	789624	8	131,96,140,98,148,185,199,104,	0,6523,7034,8071,8274,8624,9925,10338,
#Deleted in new
chr6_GL000255v2_alt	3228357	3237417	chr6_GL000255v2_alt:3228357-3237417	0	+	3228357	3234953	789624	6	124,96,140,98,148,443,	0,6516,7027,8064,8267,8617,
#Deleted in new
chr6_GL000255v2_alt	3228360	3229388	chr6_GL000255v2_alt:3228360-3229388	0	+	3228360	3228360	8553170	2	121,798,	0,230,
#Deleted in new
chr6_GL000255v2_alt	3228524	3237417	chr6_GL000255v2_alt:3228524-3237417	0	+	3228524	3228524	8553170	6	203,96,140,98,148,443,	0,6349,6860,7897,8100,8450,
#Deleted in new
chr6_GL000255v2_alt	3228547	3235833	chr6_GL000255v2_alt:3228547-3235833	0	+	3228547	3228547	8553170	3	180,96,449,	0,6326,6837,
#Deleted in new
chr6_GL000255v2_alt	3228551	3236772	chr6_GL000255v2_alt:3228551-3236772	0	+	3228551	3228551	8553170	5	338,96,140,98,148,	0,6322,6833,7870,8073,
#Deleted in new
chr6_GL000255v2_alt	3236361	3237417	chr6_GL000255v2_alt:3236361-3237417	0	+	3236361	3236361	8553170	2	411,443,	0,613,
#Deleted in new
chr6_GL000255v2_alt	3237994	3258653	chr6_GL000255v2_alt:3237994-3258653	3	+	3238078	3258512	0	41	149,199,202,71,89,83,97,106,133,116,180,183,186,159,127,75,198,112,71,140,210,52,90,210,76,157,117,172,233,168,60,94,187,91,75,103,90,99,84,133,283,	0,281,694,1105,1254,1561,1814,2049,2252,9169,9384,9709,10024,10363,10773,11067,11402,11691,11893,12222,12475,12929,13082,13307,13696,13932,14184,14406,14806,15121,15682,16791,16982,17283,17464,19030,19298,19473,19754,20100,20376,
#Deleted in new
chr6_GL000255v2_alt	3238027	3258652	chr6_GL000255v2_alt:3238027-3258652	1	+	3238078	3258512	789624	40	116,199,202,71,89,83,97,106,133,116,180,183,186,159,127,75,198,112,71,140,210,52,90,210,76,157,117,172,233,168,60,94,140,75,103,90,99,84,133,282,	0,248,661,1072,1221,1528,1781,2016,2219,9136,9351,9676,9991,10330,10740,11034,11369,11658,11860,12189,12442,12896,13049,13274,13663,13899,14151,14373,14773,15088,15649,16758,16949,17431,18997,19265,19440,19721,20067,20343,
#Deleted in new
chr6_GL000255v2_alt	3238813	3239530	chr6_GL000255v2_alt:3238813-3239530	0	+	3238813	3238813	8553170	2	77,431,	0,286,
#Deleted in new
chr6_GL000255v2_alt	3238851	3240369	chr6_GL000255v2_alt:3238851-3240369	0	+	3238851	3238851	8553170	5	39,71,89,83,123,	0,248,397,704,1395,
#Deleted in new
chr6_GL000255v2_alt	3248148	3249948	chr6_GL000255v2_alt:3248148-3249948	0	+	3248148	3248148	8553170	6	56,159,127,75,198,263,	0,209,619,913,1248,1537,
#Deleted in new
chr6_GL000255v2_alt	3251080	3251592	chr6_GL000255v2_alt:3251080-3251592	0	+	3251080	3251080	8553170	2	86,291,	0,221,
#Deleted in new
chr6_GL000255v2_alt	3251922	3254808	chr6_GL000255v2_alt:3251922-3254808	0	+	3251922	3251922	8553170	7	161,117,172,173,168,60,23,	0,256,478,938,1193,1754,2863,
#Deleted in new
chr6_GL000255v2_alt	3253713	3255691	chr6_GL000255v2_alt:3253713-3255691	0	+	3253713	3253713	8553170	5	23,94,187,91,233,	0,1072,1263,1564,1745,
#Deleted in new
chr6_GL000255v2_alt	3254822	3255502	chr6_GL000255v2_alt:3254822-3255502	0	+	3254822	3254822	8553170	2	57,526,	0,154,
#Deleted in new
chr6_GL000255v2_alt	3255126	3258653	chr6_GL000255v2_alt:3255126-3258653	0	+	3255126	3255126	8553170	8	37,91,75,103,90,99,479,283,	0,151,332,1898,2166,2341,2622,3244,
#Deleted in new
chr6_GL000255v2_alt	3255171	3258653	chr6_GL000255v2_alt:3255171-3258653	0	+	3255171	3255171	8553170	8	197,75,103,90,99,84,133,283,	0,287,1853,2121,2296,2577,2923,3199,
#Deleted in new
chr6_GL000255v2_alt	3255963	3259493	chr6_GL000255v2_alt:3255963-3259493	3	-	3255963	3255963	8553170	2	1577,502,	0,3028,
#Deleted in new
chr6_GL000255v2_alt	3256969	3258653	chr6_GL000255v2_alt:3256969-3258653	0	+	3256969	3256969	8553170	6	158,90,99,84,133,283,	0,323,498,779,1125,1401,
#Deleted in new
chr6_GL000255v2_alt	3257098	3258237	chr6_GL000255v2_alt:3257098-3258237	0	+	3257098	3257098	8553170	2	29,945,	0,194,
#Deleted in new
chr6_GL000255v2_alt	3257231	3257840	chr6_GL000255v2_alt:3257231-3257840	0	+	3257231	3257231	8553170	2	151,373,	0,236,
#Deleted in new
chr6_GL000255v2_alt	3261532	3264877	chr6_GL000255v2_alt:3261532-3264877	3	+	3261657	3264369	789624	10	327,90,155,102,102,87,201,179,104,774,	0,424,796,1058,1248,1451,1707,2108,2370,2571,
#Deleted in new
chr6_GL000255v2_alt	3261550	3262682	chr6_GL000255v2_alt:3261550-3262682	0	+	3261550	3261550	8553170	4	309,44,147,92,	0,406,786,1040,
#Deleted in new
chr6_GL000255v2_alt	3261599	3264877	chr6_GL000255v2_alt:3261599-3264877	0	+	3261599	3261599	8553170	9	260,90,155,102,102,87,201,366,774,	0,357,729,991,1181,1384,1640,2041,2504,
#Deleted in new
chr6_GL000255v2_alt	3261599	3264877	chr6_GL000255v2_alt:3261599-3264877	0	+	3261599	3261599	8553170	9	447,155,102,62,87,201,179,104,774,	0,729,991,1221,1384,1640,2041,2303,2504,
#Deleted in new
chr6_GL000255v2_alt	3261599	3264877	chr6_GL000255v2_alt:3261599-3264877	0	+	3261599	3261599	8553170	8	447,155,102,102,87,179,104,774,	0,729,991,1181,1384,2041,2303,2504,
#Deleted in new
chr6_GL000255v2_alt	3261604	3264877	chr6_GL000255v2_alt:3261604-3264877	0	+	3261604	3261604	8553170	9	442,174,102,102,87,201,179,104,774,	0,705,986,1176,1379,1635,2036,2298,2499,
#Deleted in new
chr6_GL000255v2_alt	3261649	3264905	chr6_GL000255v2_alt:3261649-3264905	1	+	3261657	3264369	0	9	210,155,102,102,87,201,179,104,802,	0,679,941,1131,1334,1590,1991,2253,2454,
#Deleted in new
chr6_GL000255v2_alt	3261649	3262350	chr6_GL000255v2_alt:3261649-3262350	0	+	3261649	3261649	8553170	2	210,394,	0,307,
#Deleted in new
chr6_GL000255v2_alt	3261649	3262718	chr6_GL000255v2_alt:3261649-3262718	0	+	3261649	3261649	8553170	4	210,90,155,128,	0,307,679,941,
#Deleted in new
chr6_GL000255v2_alt	3264388	3271214	chr6_GL000255v2_alt:3264388-3271214	3	-	3264583	3267751	789624	15	297,164,162,97,152,133,131,144,120,144,123,336,321,282,246,	0,617,858,1112,1301,1545,1797,2021,2283,2595,2853,3227,3852,5021,6580,
#Deleted in new
chr6_GL000255v2_alt	3264389	3309322	chr6_GL000255v2_alt:3264389-3309322	0	-	3264583	3309322	789624	38	296,164,162,97,152,133,131,144,120,144,123,336,321,282,279,288,318,291,324,291,324,318,333,324,327,297,324,318,315,309,288,309,306,333,306,291,297,369,	0,616,857,1111,1300,1544,1796,2020,2282,2594,2852,3226,3851,5020,6579,7208,8115,8843,11515,12233,14696,15431,16903,20241,21001,23665,26489,27218,27650,28381,28955,30817,32474,37848,40182,40850,43227,44564,
#Deleted in new
chr6_GL000255v2_alt	3264389	3269842	chr6_GL000255v2_alt:3264389-3269842	0	-	3264389	3264389	8553170	14	296,164,162,97,152,133,131,144,120,144,123,336,321,433,	0,616,857,1111,1300,1544,1796,2020,2282,2594,2852,3226,3851,5020,
#Deleted in new
chr6_GL000255v2_alt	3264389	3269363	chr6_GL000255v2_alt:3264389-3269363	0	-	3264389	3264389	8553170	13	296,164,162,97,152,133,131,144,120,144,123,336,1123,	0,616,857,1111,1300,1544,1796,2020,2282,2594,2852,3226,3851,
#Deleted in new
chr6_GL000255v2_alt	3265500	3266687	chr6_GL000255v2_alt:3265500-3266687	0	-	3265500	3265500	8553170	5	97,152,383,144,16,	0,189,433,909,1171,
#Deleted in new
chr6_GL000255v2_alt	3301712	3301833	chr6_GL000255v2_alt:3301712-3301833	3	-	3301712	3301712	8553170	1	121,	0,
#Deleted in new
chr6_GL000255v2_alt	3371555	3376277	chr6_GL000255v2_alt:3371555-3376277	3	-	3372418	3375297	789624	6	1040,186,216,91,81,112,	0,1178,2009,3450,3734,4610,
#Deleted in new
chr6_GL000255v2_alt	3371555	3375149	chr6_GL000255v2_alt:3371555-3375149	1	-	3372418	3375024	789624	4	1040,186,539,144,	0,1178,2009,3450,
#Deleted in new
chr6_GL000255v2_alt	3371555	3375120	chr6_GL000255v2_alt:3371555-3375120	0	-	3371555	3371555	8553170	3	1040,186,1556,	0,1178,2009,
#Deleted in new
chr6_GL000255v2_alt	3371555	3373054	chr6_GL000255v2_alt:3371555-3373054	0	-	3371555	3371555	8553170	2	1040,321,	0,1178,
#Deleted in new
chr6_GL000255v2_alt	3371555	3375134	chr6_GL000255v2_alt:3371555-3375134	0	-	3371555	3371555	8553170	3	1040,186,129,	0,1178,3450,
#Deleted in new
chr6_GL000255v2_alt	3373691	3377567	chr6_GL000255v2_alt:3373691-3377567	0	-	3373691	3375297	789624	5	89,91,81,100,136,	0,1314,1598,3239,3740,
#Deleted in new
chr6_GL000255v2_alt	3375175	3377154	chr6_GL000255v2_alt:3375175-3377154	0	-	3375175	3375175	8553170	3	195,201,224,	0,990,1755,
#Deleted in new
chr6_GL000255v2_alt	3375996	3377559	chr6_GL000255v2_alt:3375996-3377559	0	-	3375996	3375996	789624	3	370,100,77,	0,934,1486,
#Deleted in new
chr6_GL000255v2_alt	3375996	3377527	chr6_GL000255v2_alt:3375996-3377527	0	-	3375996	3375996	789624	3	370,100,96,	0,934,1435,
#Deleted in new
chr6_GL000255v2_alt	3375996	3377102	chr6_GL000255v2_alt:3375996-3377102	0	-	3375996	3375996	8553170	2	370,172,	0,934,
#Deleted in new
chr6_GL000255v2_alt	3376533	3377533	chr6_GL000255v2_alt:3376533-3377533	0	-	3376533	3376533	789624	3	320,71,102,	0,426,898,
#Deleted in new
chr6_GL000255v2_alt	3376578	3377520	chr6_GL000255v2_alt:3376578-3377520	0	-	3376578	3376578	789624	3	275,71,158,	0,381,784,
#Deleted in new
chr6_GL000255v2_alt	3376634	3379174	chr6_GL000255v2_alt:3376634-3379174	0	+	3377788	3379174	789624	6	196,209,191,154,96,108,	0,755,1146,1589,2249,2432,
#Deleted in new
chr6_GL000255v2_alt	3376716	3386879	chr6_GL000255v2_alt:3376716-3386879	1	+	3376820	3386151	0	9	114,191,154,96,108,84,85,55,872,	0,1064,1507,2167,2350,4116,4319,9052,9291,
#Deleted in new
chr6_GL000255v2_alt	3376735	3381045	chr6_GL000255v2_alt:3376735-3381045	2	+	3377788	3379081	789624	6	95,191,96,108,84,10,	0,1045,2148,2331,4097,4300,
#Deleted in new
chr6_GL000255v2_alt	3376770	3386879	chr6_GL000255v2_alt:3376770-3386879	1	+	3377788	3386151	789624	10	60,406,191,154,96,108,84,85,55,872,	0,422,1010,1453,2113,2296,4062,4265,8998,9237,
#Deleted in new
chr6_GL000255v2_alt	3377038	3391482	chr6_GL000255v2_alt:3377038-3391482	0	+	3377788	3389400	789624	16	560,191,154,96,108,84,85,55,79,483,110,96,171,80,154,372,	0,742,1185,1845,2028,3794,3997,8730,10741,12300,12863,13072,13249,13512,13665,14072,
#Deleted in new
chr6_GL000255v2_alt	3377192	3386881	chr6_GL000255v2_alt:3377192-3386881	1	+	3377788	3386151	789624	9	406,191,154,96,108,84,85,55,874,	0,588,1031,1691,1874,3640,3843,8576,8815,
#Deleted in new
chr6_GL000255v2_alt	3377288	3386879	chr6_GL000255v2_alt:3377288-3386879	1	+	3377788	3386151	789624	9	300,191,154,96,108,84,85,55,872,	0,492,935,1595,1778,3544,3747,8480,8719,
#Deleted in new
chr6_GL000255v2_alt	3377331	3386879	chr6_GL000255v2_alt:3377331-3386879	1	+	3377788	3386151	789624	9	109,191,154,96,108,84,85,55,872,	0,449,892,1552,1735,3501,3704,8437,8676,
#Deleted in new
chr6_GL000255v2_alt	3377360	3381120	chr6_GL000255v2_alt:3377360-3381120	0	+	3377788	3381120	789624	6	238,191,16,108,84,85,	0,420,1603,1706,3472,3675,
#Deleted in new
chr6_GL000255v2_alt	3377390	3385797	chr6_GL000255v2_alt:3377390-3385797	0	+	3377788	3379112	789624	7	208,191,154,16,108,84,29,	0,390,833,1573,1676,3442,8378,
#Deleted in new
chr6_GL000255v2_alt	3377415	3395179	chr6_GL000255v2_alt:3377415-3395179	3	+	3377788	3389400	789624	21	183,191,154,96,108,84,85,55,79,95,123,110,96,155,80,154,627,209,98,1143,256,	0,365,808,1468,1651,3417,3620,8353,10364,11923,12283,12486,12695,12888,13135,13288,13695,15078,15693,16200,17508,
#Deleted in new
chr6_GL000255v2_alt	3377659	3380892	chr6_GL000255v2_alt:3377659-3380892	0	+	3377788	3380892	789624	5	312,154,96,108,60,	0,564,1224,1407,3173,
#Deleted in new
chr6_GL000255v2_alt	3377671	3378979	chr6_GL000255v2_alt:3377671-3378979	0	+	3377788	3378979	789624	2	300,96,	0,1212,
#Deleted in new
chr6_GL000255v2_alt	3378211	3378955	chr6_GL000255v2_alt:3378211-3378955	0	+	3378331	3378955	789624	2	166,72,	0,672,
#Deleted in new
chr6_GL000255v2_alt	3380306	3387856	chr6_GL000255v2_alt:3380306-3387856	0	+	3380306	3380306	8553170	4	610,85,55,77,	0,729,5462,7473,
#Deleted in new
chr6_GL000255v2_alt	3380685	3381518	chr6_GL000255v2_alt:3380685-3381518	0	+	3380685	3380685	8553170	2	231,483,	0,350,
#Deleted in new
chr6_GL000255v2_alt	3380838	3390206	chr6_GL000255v2_alt:3380838-3390206	0	+	3380838	3389400	789624	7	78,85,55,103,483,110,96,	0,197,4930,6941,8500,9063,9272,
#Deleted in new
chr6_GL000255v2_alt	3387783	3391482	chr6_GL000255v2_alt:3387783-3391482	3	+	3389366	3391157	789624	9	75,129,123,110,96,171,80,154,372,	0,1555,1915,2118,2327,2504,2767,2920,3327,
#Deleted in new
chr6_GL000255v2_alt	3387805	3391482	chr6_GL000255v2_alt:3387805-3391482	1	+	3389366	3391157	789624	9	77,129,123,110,96,171,80,154,372,	0,1533,1893,2096,2305,2482,2745,2898,3305,
#Deleted in new
chr6_GL000255v2_alt	3387860	3390857	chr6_GL000255v2_alt:3387860-3390857	0	+	3389366	3390857	789624	8	22,129,123,110,96,111,80,154,	0,1478,1838,2041,2250,2487,2690,2843,
#Deleted in new
chr6_GL000255v2_alt	3388436	3391482	chr6_GL000255v2_alt:3388436-3391482	0	+	3388436	3388436	8553170	6	1385,110,96,171,307,372,	0,1465,1674,1851,2114,2674,
#Deleted in new
chr6_GL000255v2_alt	3389393	3390370	chr6_GL000255v2_alt:3389393-3390370	0	+	3389393	3389393	8553170	4	40,123,110,260,	0,305,508,717,
#Deleted in new
chr6_GL000255v2_alt	3390743	3391482	chr6_GL000255v2_alt:3390743-3391482	0	+	3390743	3390743	8553170	2	83,372,	0,367,
#Deleted in new
chr6_GL000255v2_alt	3391412	3401297	chr6_GL000255v2_alt:3391412-3401297	1	-	3392476	3394697	789624	7	1237,73,96,176,134,209,96,	0,1754,1953,2213,2725,3085,9789,
#Deleted in new
chr6_GL000255v2_alt	3391412	3400281	chr6_GL000255v2_alt:3391412-3400281	1	-	3392476	3394697	789624	7	1237,73,96,176,134,209,571,	0,1754,1953,2213,2725,3085,8298,
#Deleted in new
chr6_GL000255v2_alt	3391412	3396316	chr6_GL000255v2_alt:3391412-3396316	1	-	3392476	3394697	789624	7	1237,73,96,176,134,209,178,	0,1754,1953,2213,2725,3085,4726,
#Deleted in new
chr6_GL000255v2_alt	3391412	3400987	chr6_GL000255v2_alt:3391412-3400987	3	-	3392476	3394697	789624	7	1237,73,96,176,134,209,243,	0,1754,1953,2213,2725,3085,9332,
#Deleted in new
chr6_GL000255v2_alt	3391412	3400526	chr6_GL000255v2_alt:3391412-3400526	1	-	3392476	3394697	789624	7	1237,73,96,176,134,209,92,	0,1754,1953,2213,2725,3085,9022,
#Deleted in new
chr6_GL000255v2_alt	3391412	3399323	chr6_GL000255v2_alt:3391412-3399323	1	-	3392476	3394697	789624	7	1237,73,96,176,134,209,309,	0,1754,1953,2213,2725,3085,7602,
#Deleted in new
chr6_GL000255v2_alt	3391412	3400543	chr6_GL000255v2_alt:3391412-3400543	0	-	3391412	3391412	8553170	5	1237,73,96,209,833,	0,1754,1953,3085,8298,
#Deleted in new
chr6_GL000255v2_alt	3393365	3399098	chr6_GL000255v2_alt:3393365-3399098	0	-	3393365	3393365	8553170	5	96,176,134,256,84,	0,260,772,1085,5649,
#Deleted in new
chr6_GL000255v2_alt	3401554	3403994	chr6_GL000255v2_alt:3401554-3403994	3	+	3401712	3403527	789624	6	298,19,113,55,118,565,	0,1187,1297,1523,1655,1875,
#Deleted in new
chr6_GL000255v2_alt	3401637	3402974	chr6_GL000255v2_alt:3401637-3402974	0	+	3401637	3401637	8553170	3	215,19,123,	0,1104,1214,
#Deleted in new
chr6_GL000255v2_alt	3404168	3407447	chr6_GL000255v2_alt:3404168-3407447	1	-	3404753	3407423	0	10	272,109,142,131,183,88,65,196,107,76,	0,556,1279,1600,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000255v2_alt	3404168	3407438	chr6_GL000255v2_alt:3404168-3407438	1	-	3404374	3407423	0	10	272,127,27,160,183,88,65,154,107,67,	0,383,638,1571,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000255v2_alt	3404168	3407525	chr6_GL000255v2_alt:3404168-3407525	1	-	3404343	3407423	0	11	272,127,27,142,131,183,88,65,196,107,154,	0,383,638,1279,1600,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000255v2_alt	3404168	3407447	chr6_GL000255v2_alt:3404168-3407447	0	-	3404168	3404168	789624	10	272,127,27,142,131,183,88,65,196,366,	0,383,638,1279,1600,1873,2146,2356,2587,2913,
#Deleted in new
chr6_GL000255v2_alt	3404168	3406132	chr6_GL000255v2_alt:3404168-3406132	0	-	3404168	3404168	8553170	5	272,127,27,142,364,	0,383,638,1279,1600,
#Deleted in new
chr6_GL000255v2_alt	3404168	3404836	chr6_GL000255v2_alt:3404168-3404836	0	-	3404168	3404168	8553170	2	272,285,	0,383,
#Deleted in new
chr6_GL000255v2_alt	3404168	3406132	chr6_GL000255v2_alt:3404168-3406132	0	-	3404168	3404168	8553170	4	272,109,142,364,	0,556,1279,1600,
#Deleted in new
chr6_GL000255v2_alt	3404168	3407523	chr6_GL000255v2_alt:3404168-3407523	1	-	3404343	3407423	0	11	272,127,27,142,131,183,88,113,196,107,152,	0,383,638,1279,1600,1873,2146,2308,2587,2913,3203,
#Deleted in new
chr6_GL000255v2_alt	3404168	3407523	chr6_GL000255v2_alt:3404168-3407523	1	-	3404343	3407423	789624	5	272,83,123,107,152,	0,383,2660,2913,3203,
#Deleted in new
chr6_GL000255v2_alt	3404168	3407523	chr6_GL000255v2_alt:3404168-3407523	1	-	3404343	3406807	789624	10	272,127,142,131,183,88,65,196,107,152,	0,383,1279,1600,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000255v2_alt	3404168	3407523	chr6_GL000255v2_alt:3404168-3407523	3	-	3404753	3407423	0	10	272,109,142,131,183,88,113,196,107,152,	0,556,1279,1600,1873,2146,2308,2587,2913,3203,
#Deleted in new
chr6_GL000255v2_alt	3404343	3407423	chr6_GL000255v2_alt:3404343-3407423	1	-	3404343	3405777	789624	8	97,127,27,142,131,59,30,52,	0,208,463,1104,1425,1698,2815,3028,
#Deleted in new
chr6_GL000255v2_alt	3406068	3407436	chr6_GL000255v2_alt:3406068-3407436	0	-	3406068	3407423	789624	6	156,88,117,183,107,65,	0,246,456,700,1013,1303,
#Deleted in new
chr6_GL000255v2_alt	3406080	3407438	chr6_GL000255v2_alt:3406080-3407438	0	-	3406080	3407423	789624	6	144,88,113,196,107,67,	0,234,396,675,1001,1291,
#Deleted in new
chr6_GL000255v2_alt	3406609	3407523	chr6_GL000255v2_alt:3406609-3407523	1	-	3406609	3407423	789624	4	32,196,107,152,	0,146,472,762,
#Deleted in new
chr6_GL000255v2_alt	3407933	3413385	chr6_GL000255v2_alt:3407933-3413385	3	-	3409579	3413114	789624	9	1739,87,89,154,136,191,248,74,492,	0,1868,2077,2506,2911,3230,3521,3988,4960,
#Deleted in new
chr6_GL000255v2_alt	3409453	3410713	chr6_GL000255v2_alt:3409453-3410713	0	-	3409453	3409453	8553170	2	646,274,	0,986,
#Deleted in new
chr6_GL000255v2_alt	3410170	3413141	chr6_GL000255v2_alt:3410170-3413141	0	-	3410170	3410170	8553170	6	423,136,191,248,74,248,	0,674,993,1284,1751,2723,
#Deleted in new
chr6_GL000255v2_alt	3410430	3412015	chr6_GL000255v2_alt:3410430-3412015	0	-	3410430	3410430	8553170	4	163,136,191,561,	0,414,733,1024,
#Deleted in new
chr6_GL000255v2_alt	3411477	3412276	chr6_GL000255v2_alt:3411477-3412276	0	-	3411477	3411477	8553170	2	225,355,	0,444,
#Deleted in new
chr6_GL000255v2_alt	3413964	3416105	chr6_GL000255v2_alt:3413964-3416105	1	-	3414564	3415712	789624	4	738,200,103,435,	0,943,1382,1706,
#Deleted in new
chr6_GL000255v2_alt	3413964	3418722	chr6_GL000255v2_alt:3413964-3418722	1	-	3414564	3415712	789624	8	738,200,103,59,84,81,93,98,	0,943,1382,1706,2275,3544,3971,4660,
#Deleted in new
chr6_GL000255v2_alt	3413964	3416084	chr6_GL000255v2_alt:3413964-3416084	2	-	3415064	3415712	789624	4	738,162,103,414,	0,943,1382,1706,
#Deleted in new
chr6_GL000255v2_alt	3413964	3416067	chr6_GL000255v2_alt:3413964-3416067	1	-	3414564	3415681	789624	4	738,200,125,397,	0,943,1382,1706,
#Deleted in new
chr6_GL000255v2_alt	3413965	3416317	chr6_GL000255v2_alt:3413965-3416317	1	-	3414972	3416317	789624	5	737,200,103,59,78,	0,942,1381,1705,2274,
#Deleted in new
chr6_GL000255v2_alt	3418041	3447269	chr6_GL000255v2_alt:3418041-3447269	3	-	3418635	3447130	789624	30	1308,98,148,296,139,82,220,176,384,524,113,253,185,154,88,118,153,146,160,123,114,114,195,156,237,123,348,296,82,212,	0,1481,2081,2455,3577,3805,4082,5997,6283,7242,8936,9303,15916,17634,17984,18295,18848,19270,20386,22105,22313,23155,24752,25289,25565,25916,26138,27671,28165,29016,
#Deleted in new
chr6_GL000255v2_alt	3418041	3420175	chr6_GL000255v2_alt:3418041-3420175	0	-	3418041	3418041	8553170	2	1579,53,	0,2081,
#Deleted in new
chr6_GL000255v2_alt	3418041	3427378	chr6_GL000255v2_alt:3418041-3427378	0	-	3418041	3418041	8553170	10	1308,98,148,296,139,82,220,176,2766,34,	0,1481,2081,2455,3577,3805,4082,5997,6283,9303,
#Deleted in new
chr6_GL000255v2_alt	3434131	3437439	chr6_GL000255v2_alt:3434131-3437439	0	-	3434131	3434131	8553170	5	11,154,118,153,128,	0,1544,2205,2758,3180,
#Deleted in new
chr6_GL000255v2_alt	3439061	3447259	chr6_GL000255v2_alt:3439061-3447259	0	-	3439061	3439061	8553170	11	1208,114,114,195,156,237,123,348,296,82,202,	0,1293,2135,3732,4269,4545,4896,5118,6651,7145,7996,
#Deleted in new
chr6_GL000255v2_alt	3516097	3594956	chr6_GL000255v2_alt:3516097-3594956	1	-	3516380	3594755	789624	26	1338,15,21,21,21,21,21,24,24,21,21,21,21,21,21,39,21,21,21,21,21,30,33,33,87,214,	0,7214,7972,9894,23674,29766,30397,30871,31940,37874,39321,42724,43199,43902,46266,46888,50528,56685,62064,62589,73117,73223,74884,75740,76857,78645,
#Deleted in new
chr6_GL000255v2_alt	3516097	3594928	chr6_GL000255v2_alt:3516097-3594928	3	-	3516380	3594755	789624	23	1338,15,21,21,21,21,24,21,21,21,21,21,21,39,90,21,21,21,30,33,33,87,186,	0,7214,7972,9894,29766,30397,30871,37874,39321,42724,43199,43902,46266,46888,56685,62064,62589,73117,73223,74884,75740,76857,78645,
#Deleted in new
chr6_GL000255v2_alt	3516355	3594755	chr6_GL000255v2_alt:3516355-3594755	1	-	3516355	3594755	789624	34	69,636,69,296,15,21,21,21,21,21,18,5,24,13,9,11,8,21,23,21,21,39,21,21,21,17,5,21,9,17,33,33,87,13,	0,73,713,784,6956,7714,9636,23416,29508,30139,30615,30882,31682,35476,36999,38711,39076,42466,42941,43644,46008,46630,50270,56427,61806,62331,63525,72859,72965,72978,74626,75482,76599,78387,
#Deleted in new
chr6_GL000255v2_alt	3516380	3594755	chr6_GL000255v2_alt:3516380-3594755	1	-	3516380	3594755	789624	24	1055,15,21,21,21,21,21,24,21,21,21,21,21,21,39,21,21,21,21,30,33,33,87,13,	0,6931,7689,9611,23391,29483,30114,30588,37591,39038,42441,42916,43619,45983,46605,50245,56402,61781,62306,72940,74601,75457,76574,78362,
#Deleted in new
chr6_GL000255v2_alt	3516380	3594755	chr6_GL000255v2_alt:3516380-3594755	1	-	3516380	3594755	789624	23	1055,15,21,21,21,21,24,21,21,21,21,21,21,39,90,21,21,21,30,33,33,87,13,	0,6931,7689,9611,22769,30114,30588,37591,39038,42441,42916,43619,45983,46605,56402,61781,62306,72834,72940,74601,75457,76574,78362,
#Deleted in new
chr6_GL000255v2_alt	3516380	3594755	chr6_GL000255v2_alt:3516380-3594755	1	-	3516380	3594755	789624	26	1055,15,21,21,21,21,21,21,24,21,21,21,21,21,21,39,21,21,21,21,21,30,33,33,87,13,	0,6931,7689,9611,22769,23391,29483,30114,30588,37591,39038,42441,42916,43619,45983,46605,50245,56402,61781,62306,72834,72940,74601,75457,76574,78362,
#Deleted in new
chr6_GL000255v2_alt	3548600	3549560	chr6_GL000255v2_alt:3548600-3549560	7	+	3548600	3548600	16724991	1	960,	0,
#Deleted in new
chr6_GL000255v2_alt	3575919	3576026	chr6_GL000255v2_alt:3575919-3576026	3	+	3575919	3575919	8553170	1	107,	0,
#Deleted in new
chr6_GL000255v2_alt	3613549	3616725	chr6_GL000255v2_alt:3613549-3616725	3	+	3613549	3613549	789624	3	244,128,238,	0,1103,2938,
#Deleted in new
chr6_GL000255v2_alt	3617001	3630176	chr6_GL000255v2_alt:3617001-3630176	3	-	3617007	3630169	789624	7	95,282,348,21,282,348,86,	0,781,2076,7818,8968,10972,13089,
#Deleted in new
chr6_GL000255v2_alt	3617774	3630169	chr6_GL000255v2_alt:3617774-3630169	1	-	3617774	3630169	789624	6	290,348,21,282,348,79,	0,1303,7045,8195,10199,12316,
#Deleted in new
chr6_GL000255v2_alt	3617774	3630169	chr6_GL000255v2_alt:3617774-3630169	1	-	3617774	3619324	789624	5	290,348,21,107,79,	0,1303,7045,10440,12316,
#Deleted in new
chr6_GL000255v2_alt	3628071	3630176	chr6_GL000255v2_alt:3628071-3630176	0	-	3628071	3630169	789624	2	247,86,	0,2019,
#Deleted in new
chr6_GL000255v2_alt	3662890	3668101	chr6_GL000255v2_alt:3662890-3668101	3	+	3662999	3666957	0	5	191,246,282,166,395,	0,2604,3341,3912,4816,
#Deleted in new
chr6_GL000255v2_alt	3662920	3666244	chr6_GL000255v2_alt:3662920-3666244	0	+	3662920	3662920	8553170	3	161,117,13,	0,2703,3311,
#Deleted in new
chr6_GL000255v2_alt	3662972	3668101	chr6_GL000255v2_alt:3662972-3668101	1	+	3662999	3666957	789624	5	109,246,207,166,395,	0,2522,3334,3830,4734,
#Deleted in new
chr6_GL000255v2_alt	3682908	3696591	chr6_GL000255v2_alt:3682908-3696591	7	-	3682908	3682908	16724991	2	267,76,	0,13607,
#Deleted in new
chr6_GL000255v2_alt	3712784	3712933	chr6_GL000255v2_alt:3712784-3712933	3	-	3712784	3712784	8553170	1	149,	0,
#Deleted in new
chr6_GL000255v2_alt	3715357	3728445	chr6_GL000255v2_alt:3715357-3728445	3	-	3715671	3728382	0	6	328,24,111,282,270,163,	0,1127,1624,2419,5003,12925,
#Deleted in new
chr6_GL000255v2_alt	3750634	3750781	chr6_GL000255v2_alt:3750634-3750781	3	-	3750634	3750634	8553170	1	147,	0,
#Deleted in new
chr6_GL000255v2_alt	3754057	3768545	chr6_GL000255v2_alt:3754057-3768545	7	-	3754057	3754057	16724991	4	24,111,262,106,	0,500,1387,14382,
#Deleted in new
chr6_GL000255v2_alt	3776540	3776687	chr6_GL000255v2_alt:3776540-3776687	3	-	3776540	3776540	8553170	1	147,	0,
#Deleted in new
chr6_GL000255v2_alt	3779003	3792428	chr6_GL000255v2_alt:3779003-3792428	3	-	3779326	3792322	0	6	337,24,111,282,270,206,	0,1125,1624,2433,4955,13219,
#Deleted in new
chr6_GL000255v2_alt	3781436	3809621	chr6_GL000255v2_alt:3781436-3809621	0	-	3781436	3809621	789624	4	282,270,151,50,	0,2522,26239,28135,
#Deleted in new
chr6_GL000255v2_alt	3836384	3842664	chr6_GL000255v2_alt:3836384-3842664	1	+	3836486	3841845	0	5	184,246,282,175,635,	0,4003,4661,5306,5645,
#Deleted in new
chr6_GL000255v2_alt	3836467	3842664	chr6_GL000255v2_alt:3836467-3842664	3	+	3836486	3841845	0	5	101,246,282,175,299,	0,3920,4578,5223,5898,
#Deleted in new
chr6_GL000255v2_alt	3836467	3842664	chr6_GL000255v2_alt:3836467-3842664	1	+	3836486	3841845	0	5	101,246,282,175,433,	0,3920,4578,5223,5764,
#Deleted in new
chr6_GL000255v2_alt	3853334	3860946	chr6_GL000255v2_alt:3853334-3860946	3	-	3854141	3860890	0	5	821,111,282,270,165,	0,1941,2568,5739,7447,
#Deleted in new
chr6_GL000255v2_alt	3853378	3860925	chr6_GL000255v2_alt:3853378-3860925	1	-	3854141	3860890	789624	4	777,282,270,144,	0,2524,5695,7403,
#Deleted in new
chr6_GL000255v2_alt	3853785	3854634	chr6_GL000255v2_alt:3853785-3854634	3	+	3853785	3853785	8553170	2	176,374,	0,475,
#Deleted in new
chr6_GL000255v2_alt	3853790	3856386	chr6_GL000255v2_alt:3853790-3856386	3	-	3853790	3853790	8553170	2	213,97,	0,2499,
#Deleted in new
chr6_GL000255v2_alt	3900398	3901230	chr6_GL000255v2_alt:3900398-3901230	7	-	3900398	3900398	16724991	1	832,	0,
#Deleted in new
chr6_GL000255v2_alt	3912256	3913079	chr6_GL000255v2_alt:3912256-3913079	0	+	3912256	3912256	8553170	2	143,238,	0,585,
#Deleted in new
chr6_GL000255v2_alt	3912281	3913084	chr6_GL000255v2_alt:3912281-3913084	3	+	3912281	3912281	8553170	3	118,35,243,	0,376,560,
#Deleted in new
chr6_GL000255v2_alt	3912636	3913087	chr6_GL000255v2_alt:3912636-3913087	0	+	3912636	3912636	8553170	2	56,246,	0,205,
#Deleted in new
chr6_GL000255v2_alt	3925012	3925949	chr6_GL000255v2_alt:3925012-3925949	7	-	3925012	3925012	16724991	2	80,276,	0,661,
#Deleted in new
chr6_GL000255v2_alt	3935605	3941465	chr6_GL000255v2_alt:3935605-3941465	3	+	3935707	3940669	789624	5	184,249,282,175,609,	0,3828,4460,4909,5251,
#Deleted in new
chr6_GL000255v2_alt	3950398	3957836	chr6_GL000255v2_alt:3950398-3957836	1	-	3951536	3957786	789624	5	1209,111,282,267,159,	0,1678,2756,5565,7279,
#Deleted in new
chr6_GL000255v2_alt	3950398	3957794	chr6_GL000255v2_alt:3950398-3957794	1	-	3950753	3957786	789624	5	369,24,282,267,117,	0,1185,2756,5565,7279,
#Deleted in new
chr6_GL000255v2_alt	3950398	3957838	chr6_GL000255v2_alt:3950398-3957838	3	-	3950753	3957786	789624	6	369,24,111,282,267,161,	0,1185,1678,2756,5565,7279,
#Deleted in new
chr6_GL000255v2_alt	3950688	3957770	chr6_GL000255v2_alt:3950688-3957770	0	-	3950753	3957770	789624	4	79,282,267,93,	0,2466,5275,6989,
#Deleted in new
chr6_GL000255v2_alt	4016120	4033016	chr6_GL000255v2_alt:4016120-4033016	3	-	4016576	4032520	0	12	486,137,160,174,189,129,198,206,131,115,497,75,	0,7566,8096,8433,8784,10499,10793,13320,13809,15703,15907,16821,
#Deleted in new
chr6_GL000255v2_alt	4019696	4033059	chr6_GL000255v2_alt:4019696-4033059	1	-	4023141	4032520	789624	13	3496,126,137,160,174,189,129,198,206,131,115,497,118,	0,3499,3990,4520,4857,5208,6923,7217,9744,10233,12127,12331,13245,
#Deleted in new
chr6_GL000255v2_alt	4019701	4033069	chr6_GL000255v2_alt:4019701-4033069	1	-	4023192	4032520	0	12	3620,137,160,174,189,129,198,206,131,115,497,128,	0,3985,4515,4852,5203,6918,7212,9739,10228,12122,12326,13240,
#Deleted in new
chr6_GL000255v2_alt	4023230	4025014	chr6_GL000255v2_alt:4023230-4025014	0	-	4023230	4023230	8553170	4	91,137,160,461,	0,456,986,1323,
#Deleted in new
chr6_GL000255v2_alt	4026581	4027020	chr6_GL000255v2_alt:4026581-4027020	0	-	4026581	4026581	8553170	2	167,107,	0,332,
#Deleted in new
chr6_GL000255v2_alt	4035004	4038335	chr6_GL000255v2_alt:4035004-4038335	1	-	4035246	4038284	0	6	331,205,130,112,148,198,	0,814,1417,1955,2225,3133,
#Deleted in new
chr6_GL000255v2_alt	4035004	4038991	chr6_GL000255v2_alt:4035004-4038991	3	-	4035246	4038701	0	6	331,205,130,112,148,425,	0,814,1417,1955,2225,3562,
#Deleted in new
chr6_GL000255v2_alt	4035004	4038308	chr6_GL000255v2_alt:4035004-4038308	1	-	4035246	4038284	789624	6	331,205,130,40,148,171,	0,814,1417,1955,2225,3133,
#Deleted in new
chr6_GL000255v2_alt	4035004	4036322	chr6_GL000255v2_alt:4035004-4036322	0	-	4035004	4035004	8553170	2	331,504,	0,814,
#Deleted in new
chr6_GL000255v2_alt	4035308	4038939	chr6_GL000255v2_alt:4035308-4038939	0	-	4035308	4035308	8553170	5	27,205,130,418,373,	0,510,1113,1651,3258,
#Deleted in new
chr6_GL000255v2_alt	4038373	4040783	chr6_GL000255v2_alt:4038373-4040783	3	+	4038373	4038373	789624	2	189,1078,	0,1332,
#Deleted in new
chr6_GL000255v2_alt	4038395	4040107	chr6_GL000255v2_alt:4038395-4040107	0	+	4038395	4038395	8553170	3	167,301,490,	0,462,1222,
#Deleted in new
chr6_GL000255v2_alt	4038420	4040274	chr6_GL000255v2_alt:4038420-4040274	0	+	4038420	4038420	789624	3	142,226,569,	0,512,1285,
#Deleted in new
chr6_GL000255v2_alt	4038420	4040498	chr6_GL000255v2_alt:4038420-4040498	0	+	4038420	4038420	789624	3	142,61,793,	0,677,1285,
#Deleted in new
chr6_GL000255v2_alt	4038421	4039983	chr6_GL000255v2_alt:4038421-4039983	0	+	4038421	4038421	8553170	2	737,278,	0,1284,
#Deleted in new
chr6_GL000255v2_alt	4038423	4053874	chr6_GL000255v2_alt:4038423-4053874	3	+	4050434	4053821	789624	6	139,68,132,130,142,181,	0,12002,13128,13870,14229,15270,
#Deleted in new
chr6_GL000255v2_alt	4038425	4040366	chr6_GL000255v2_alt:4038425-4040366	0	+	4038425	4038425	8553170	2	137,749,	0,1192,
#Deleted in new
chr6_GL000255v2_alt	4039123	4052726	chr6_GL000255v2_alt:4039123-4052726	0	+	4050434	4052726	789624	5	35,68,132,130,74,	0,11302,12428,13170,13529,
#Deleted in new
chr6_GL000255v2_alt	4039496	4048266	chr6_GL000255v2_alt:4039496-4048266	3	-	4039866	4048104	0	11	577,137,163,174,189,129,198,206,131,115,940,	0,1859,2304,2710,3443,3781,5111,5735,6900,7179,7830,
#Deleted in new
chr6_GL000255v2_alt	4039496	4044430	chr6_GL000255v2_alt:4039496-4044430	0	-	4039496	4039496	8553170	5	577,137,163,174,1491,	0,1859,2304,2710,3443,
#Deleted in new
chr6_GL000255v2_alt	4039962	4042518	chr6_GL000255v2_alt:4039962-4042518	0	-	4039962	4039962	8553170	3	111,608,312,	0,1393,2244,
#Deleted in new
chr6_GL000255v2_alt	4048435	4053189	chr6_GL000255v2_alt:4048435-4053189	0	+	4048435	4048435	8553170	3	142,1998,537,	0,1990,4217,
#Deleted in new
chr6_GL000255v2_alt	4048448	4053874	chr6_GL000255v2_alt:4048448-4053874	1	+	4048517	4053821	0	6	129,68,132,130,142,181,	0,1977,3103,3845,4204,5245,
#Deleted in new
chr6_GL000255v2_alt	4048515	4073874	chr6_GL000255v2_alt:4048515-4073874	1	+	4048517	4073773	789624	6	62,68,130,142,93,145,	0,1910,3778,4137,22823,25214,
#Deleted in new
chr6_GL000255v2_alt	4050384	4053011	chr6_GL000255v2_alt:4050384-4053011	0	+	4050384	4050384	8553170	4	109,132,130,359,	0,1167,1909,2268,
#Deleted in new
chr6_GL000255v2_alt	4073457	4074135	chr6_GL000255v2_alt:4073457-4074135	7	-	4073457	4073457	16724991	1	678,	0,
#Deleted in new
chr6_GL000255v2_alt	4073502	4074120	chr6_GL000255v2_alt:4073502-4074120	5	-	4073502	4073502	16724991	1	618,	0,
#Deleted in new
chr6_GL000255v2_alt	4090698	4090773	chr6_GL000255v2_alt:4090698-4090773	7	+	4090698	4090698	16724991	1	75,	0,
#Deleted in new
chr6_GL000255v2_alt	4128936	4135377	chr6_GL000255v2_alt:4128936-4135377	1	-	4129278	4135114	0	6	359,36,117,285,282,318,	0,713,907,2543,4055,6123,
#Deleted in new
chr6_GL000255v2_alt	4128936	4135328	chr6_GL000255v2_alt:4128936-4135328	3	-	4129295	4135114	789624	5	390,121,285,282,269,	0,903,2543,4055,6123,
#Deleted in new
chr6_GL000255v2_alt	4128936	4131747	chr6_GL000255v2_alt:4128936-4131747	0	-	4129278	4131747	789624	3	359,36,268,	0,713,2543,
#Deleted in new
chr6_GL000255v2_alt	4128936	4132996	chr6_GL000255v2_alt:4128936-4132996	0	-	4129278	4132996	789624	4	359,117,285,5,	0,907,2543,4055,
#Deleted in new
chr6_GL000255v2_alt	4128936	4135291	chr6_GL000255v2_alt:4128936-4135291	0	-	4128936	4128936	8553170	2	4337,232,	0,6123,
#Deleted in new
chr6_GL000255v2_alt	4128936	4131209	chr6_GL000255v2_alt:4128936-4131209	0	-	4128936	4128936	8553170	2	359,1560,	0,713,
#Deleted in new
chr6_GL000255v2_alt	4128936	4131194	chr6_GL000255v2_alt:4128936-4131194	0	-	4128936	4128936	8553170	3	359,36,1351,	0,713,907,
#Deleted in new
chr6_GL000255v2_alt	4131671	4147432	chr6_GL000255v2_alt:4131671-4147432	0	-	4131671	4147346	789624	4	93,282,63,174,	0,1320,3388,15587,
#Deleted in new
chr6_GL000255v2_alt	4142919	4147371	chr6_GL000255v2_alt:4142919-4147371	1	-	4143173	4147346	789624	4	259,129,279,113,	0,661,1001,4339,
#Deleted in new
chr6_GL000255v2_alt	4142919	4147432	chr6_GL000255v2_alt:4142919-4147432	1	-	4143173	4147346	0	5	259,129,279,285,174,	0,661,1001,1909,4339,
#Deleted in new
chr6_GL000255v2_alt	4142919	4147418	chr6_GL000255v2_alt:4142919-4147418	1	-	4143173	4147346	789624	5	259,129,177,285,160,	0,661,1001,1909,4339,
#Deleted in new
chr6_GL000255v2_alt	4142919	4143981	chr6_GL000255v2_alt:4142919-4143981	0	-	4142919	4142919	8553170	2	259,401,	0,661,
#Deleted in new
chr6_GL000255v2_alt	4142919	4147418	chr6_GL000255v2_alt:4142919-4147418	0	-	4142919	4142919	8553170	4	259,126,1193,160,	0,664,1001,4339,
#Deleted in new
chr6_GL000255v2_alt	4143047	4165041	chr6_GL000255v2_alt:4143047-4165041	0	-	4143047	4143047	8553170	5	131,129,15,285,138,	0,533,873,1781,21856,
#Deleted in new
chr6_GL000255v2_alt	4143080	4162769	chr6_GL000255v2_alt:4143080-4162769	2	-	4143080	4143080	8553170	4	98,129,279,300,	0,500,840,19389,
#Deleted in new
chr6_GL000255v2_alt	4143580	4146771	chr6_GL000255v2_alt:4143580-4146771	0	-	4143580	4146771	789624	4	129,279,285,178,	0,340,1248,3013,
#Deleted in new
chr6_GL000255v2_alt	4143966	4163419	chr6_GL000255v2_alt:4143966-4163419	0	-	4143966	4145102	789624	3	233,285,93,	0,862,19360,
#Deleted in new
chr6_GL000255v2_alt	4144393	4147344	chr6_GL000255v2_alt:4144393-4147344	0	-	4144393	4144393	8553170	3	720,178,86,	0,2200,2865,
#Deleted in new
chr6_GL000255v2_alt	4162984	4175823	chr6_GL000255v2_alt:4162984-4175823	3	+	4167223	4175036	0	13	397,1333,304,138,139,215,375,129,249,263,305,123,924,	0,2935,5802,6720,7364,7584,7896,8776,9091,9460,11161,11675,11915,
#Deleted in new
chr6_GL000255v2_alt	4163582	4166466	chr6_GL000255v2_alt:4163582-4166466	0	+	4163582	4163582	8553170	2	95,547,	0,2337,
#Deleted in new
chr6_GL000255v2_alt	4163643	4170937	chr6_GL000255v2_alt:4163643-4170937	0	+	4163643	4170937	789624	6	34,304,138,139,215,57,	0,5143,6061,6705,6925,7237,
#Deleted in new
chr6_GL000255v2_alt	4164627	4165142	chr6_GL000255v2_alt:4164627-4165142	3	+	4164627	4164627	8553170	2	131,67,	0,448,
#Deleted in new
chr6_GL000255v2_alt	4165212	4175823	chr6_GL000255v2_alt:4165212-4175823	1	+	4167223	4175036	0	13	310,1333,304,138,139,215,375,129,249,263,305,123,924,	0,707,3574,4492,5136,5356,5668,6548,6863,7232,8933,9447,9687,
#Deleted in new
chr6_GL000255v2_alt	4165254	4172516	chr6_GL000255v2_alt:4165254-4172516	0	+	4167223	4171584	789624	10	268,1333,304,138,139,215,375,311,249,72,	0,665,3532,4450,5094,5314,5626,6324,6821,7190,
#Deleted in new
chr6_GL000255v2_alt	4165277	4175823	chr6_GL000255v2_alt:4165277-4175823	0	+	4167223	4169723	789624	14	245,1333,304,92,138,139,215,375,129,249,263,305,123,924,	0,642,3509,4068,4427,5071,5291,5603,6483,6798,7167,8868,9382,9622,
#Deleted in new
chr6_GL000255v2_alt	4167054	4175823	chr6_GL000255v2_alt:4167054-4175823	1	+	4167223	4175036	0	13	198,304,138,139,215,375,129,249,263,105,305,123,924,	0,1732,2650,3294,3514,3826,4706,5021,5390,6351,7091,7605,7845,
#Deleted in new
chr6_GL000255v2_alt	4167408	4175823	chr6_GL000255v2_alt:4167408-4175823	0	+	4167408	4175036	789624	12	46,304,138,139,215,375,129,249,263,305,123,924,	0,1378,2296,2940,3160,3472,4352,4667,5036,6737,7251,7491,
#Deleted in new
chr6_GL000255v2_alt	4170459	4172533	chr6_GL000255v2_alt:4170459-4172533	0	+	4170459	4170459	8553170	5	28,215,1009,249,89,	0,109,421,1616,1985,
#Deleted in new
chr6_GL000255v2_alt	4170887	4172220	chr6_GL000255v2_alt:4170887-4172220	0	+	4170887	4170887	8553170	3	368,154,145,	0,848,1188,
#Deleted in new
chr6_GL000255v2_alt	4171868	4173120	chr6_GL000255v2_alt:4171868-4173120	0	+	4171868	4171868	8553170	3	21,249,676,	0,207,576,
#Deleted in new
chr6_GL000255v2_alt	4173857	4175604	chr6_GL000255v2_alt:4173857-4175604	0	+	4173857	4173857	8553170	2	925,705,	0,1042,
#Deleted in new
chr6_GL000255v2_alt	4173999	4175084	chr6_GL000255v2_alt:4173999-4175084	0	+	4173999	4173999	8553170	3	451,123,185,	0,660,900,
#Deleted in new
chr6_GL000255v2_alt	4198451	4203886	chr6_GL000255v2_alt:4198451-4203886	3	-	4201111	4203810	0	5	2664,136,282,249,158,	0,2902,3133,3835,5277,
#Deleted in new
chr6_GL000255v2_alt	4200880	4201658	chr6_GL000255v2_alt:4200880-4201658	0	-	4200880	4200880	8553170	3	235,136,31,	0,473,747,
#Deleted in new
chr6_GL000255v2_alt	4201074	4202328	chr6_GL000255v2_alt:4201074-4202328	0	-	4201074	4201074	8553170	3	41,513,42,	0,279,1212,
#Deleted in new
chr6_GL000255v2_alt	4201718	4202398	chr6_GL000255v2_alt:4201718-4202398	0	-	4201718	4201718	8553170	2	433,112,	0,568,
#Deleted in new
chr6_GL000255v2_alt	4201770	4203853	chr6_GL000255v2_alt:4201770-4203853	0	-	4201770	4203810	789624	3	96,82,125,	0,516,1958,
#Deleted in new
chr6_GL000255v2_alt	4202334	4203856	chr6_GL000255v2_alt:4202334-4203856	0	-	4202334	4202334	8553170	2	344,128,	0,1394,
#Deleted in new
chr6_GL000255v2_alt	4259200	4275348	chr6_GL000255v2_alt:4259200-4275348	3	-	4263281	4268202	0	6	779,167,282,246,199,31,	0,4069,4450,5072,8902,16117,
#Deleted in new
chr6_GL000255v2_alt	4259638	4268247	chr6_GL000255v2_alt:4259638-4268247	0	-	4259638	4259638	8553170	2	4880,145,	0,8464,
#Deleted in new
chr6_GL000255v2_alt	4262291	4263880	chr6_GL000255v2_alt:4262291-4263880	0	-	4263281	4263880	789624	2	1145,230,	0,1359,
#Deleted in new
chr6_GL000255v2_alt	4263329	4268269	chr6_GL000255v2_alt:4263329-4268269	0	-	4263329	4268202	789624	4	107,271,158,167,	0,321,1031,4773,
#Deleted in new
chr6_GL000255v2_alt	4263650	4275405	chr6_GL000255v2_alt:4263650-4275405	0	-	4263650	4268202	789624	4	282,246,302,88,	0,622,4452,11667,
#Deleted in new
chr6_GL000255v2_alt	4263735	4275393	chr6_GL000255v2_alt:4263735-4275393	0	-	4263735	4263735	8553170	3	197,246,76,	0,537,11582,
#Deleted in new
chr6_GL000255v2_alt	4263793	4268265	chr6_GL000255v2_alt:4263793-4268265	0	-	4263793	4263793	8553170	3	139,246,195,	0,479,4277,
#Deleted in new
chr6_GL000255v2_alt	4268133	4275413	chr6_GL000255v2_alt:4268133-4275413	0	-	4268133	4268202	789624	2	209,96,	0,7184,
#Deleted in new
chr6_GL000255v2_alt	4270557	4281835	chr6_GL000255v2_alt:4270557-4281835	1	+	4270673	4280872	0	6	216,264,282,111,24,663,	0,4752,9026,9855,10295,10615,
#Deleted in new
chr6_GL000255v2_alt	4270603	4281835	chr6_GL000255v2_alt:4270603-4281835	3	+	4270673	4280872	789624	6	170,264,192,111,24,663,	0,4706,9070,9809,10249,10569,
#Deleted in new
chr6_GL000255v2_alt	4270641	4275870	chr6_GL000255v2_alt:4270641-4275870	0	+	4270641	4270641	8553170	2	132,561,	0,4668,
#Deleted in new
chr6_GL000255v2_alt	4274088	4274498	chr6_GL000255v2_alt:4274088-4274498	7	+	4274088	4274088	16724991	1	410,	0,
#Deleted in new
chr6_GL000255v2_alt	4275023	4278650	chr6_GL000255v2_alt:4275023-4278650	0	+	4275023	4275023	8553170	3	149,264,499,	0,286,3128,
#Deleted in new
chr6_GL000255v2_alt	4275023	4279591	chr6_GL000255v2_alt:4275023-4279591	0	+	4275023	4275023	8553170	3	149,264,8,	0,286,4560,
#Deleted in new
chr6_GL000255v2_alt	4275080	4279865	chr6_GL000255v2_alt:4275080-4279865	0	+	4275080	4275080	8553170	2	493,282,	0,4503,
#Deleted in new
chr6_GL000255v2_alt	4275124	4280523	chr6_GL000255v2_alt:4275124-4280523	0	+	4275124	4280523	789624	4	48,247,282,111,	0,202,4459,5288,
#Deleted in new
chr6_GL000255v2_alt	4275309	4281835	chr6_GL000255v2_alt:4275309-4281835	0	+	4275309	4281181	789624	5	264,282,128,24,663,	0,4274,5103,5543,5863,
#Deleted in new
chr6_GL000255v2_alt	4275578	4278528	chr6_GL000255v2_alt:4275578-4278528	0	+	4275578	4275578	8553170	3	291,132,377,	0,1066,2573,
#Deleted in new
chr6_GL000255v2_alt	4286386	4291929	chr6_GL000255v2_alt:4286386-4291929	7	-	4286386	4286386	16724991	4	151,282,244,55,	0,366,1141,5488,
#Deleted in new
chr6_GL000255v2_alt	4298429	4301966	chr6_GL000255v2_alt:4298429-4301966	7	-	4298429	4298429	16724991	6	39,60,167,211,136,63,	0,144,2173,2786,3112,3474,
#Deleted in new
chr6_GL000255v2_alt	4307086	4313823	chr6_GL000255v2_alt:4307086-4313823	5	+	4307086	4307086	16724991	3	165,264,760,	0,4543,5977,
#Deleted in new
chr6_GL000255v2_alt	4307151	4323435	chr6_GL000255v2_alt:4307151-4323435	7	+	4307151	4307151	16724991	5	100,264,281,111,20,	0,4478,15017,15833,16264,
#Deleted in new
chr6_GL000255v2_alt	4325565	4337701	chr6_GL000255v2_alt:4325565-4337701	7	-	4325565	4325565	16724991	2	127,102,	0,12034,
#Deleted in new
chr6_GL000255v2_alt	4339165	4342150	chr6_GL000255v2_alt:4339165-4342150	3	+	4339165	4339165	8553170	2	164,553,	0,2432,
#Deleted in new
chr6_GL000255v2_alt	4357084	4386902	chr6_GL000255v2_alt:4357084-4386902	3	-	4358081	4386643	789624	64	1138,207,113,268,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,87,75,63,42,60,63,192,163,211,150,341,	0,1586,2171,2868,3250,3490,3832,4039,4389,4583,4745,5118,5838,6025,6275,6703,7151,7367,7646,7877,8130,8433,8590,8786,9032,9369,9608,9849,10379,10667,10821,11020,11192,11330,11484,11846,12893,13335,13578,13752,14040,14311,14500,14731,14981,15451,15627,15754,15998,16239,16392,16550,16750,17038,17577,17987,18283,18430,22310,23945,25680,26296,26638,29477,
#Deleted in new
chr6_GL000255v2_alt	4357095	4386871	chr6_GL000255v2_alt:4357095-4386871	1	-	4358081	4386643	789624	63	1127,207,113,268,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,87,75,63,42,60,192,163,211,150,310,	0,1575,2160,2857,3239,3479,3821,4028,4378,4572,4734,5107,5827,6014,6264,6692,7140,7356,7635,7866,8119,8422,8579,8775,9021,9358,9597,9838,10368,10656,10810,11009,11181,11319,11473,11835,12882,13324,13567,13741,14029,14300,14489,14720,14970,15440,15616,15743,15987,16228,16381,16539,16739,17027,17566,17976,18272,18419,23934,25669,26285,26627,29466,
#Deleted in new
chr6_GL000255v2_alt	4357095	4386871	chr6_GL000255v2_alt:4357095-4386871	1	-	4358081	4386643	789624	66	1127,207,113,268,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,87,75,63,42,60,180,63,78,192,163,211,150,310,	0,1575,2160,2857,3239,3479,3821,4028,4378,4572,4734,5107,5827,6014,6264,6692,7140,7356,7635,7866,8119,8422,8579,8775,9021,9358,9597,9838,10368,10656,10810,11009,11181,11319,11473,11835,12882,13324,13567,13741,14029,14300,14489,14720,14970,15440,15616,15743,15987,16228,16381,16539,16739,17027,17566,17976,18272,18419,21452,22299,23008,23934,25669,26285,26627,29466,
#Deleted in new
chr6_GL000255v2_alt	4357098	4372297	chr6_GL000255v2_alt:4357098-4372297	0	-	4358081	4372297	789624	9	1124,207,113,268,37,45,54,45,91,	0,1572,2157,2854,14314,14486,14717,14967,15108,
#Deleted in new
chr6_GL000255v2_alt	4372535	4386870	chr6_GL000255v2_alt:4372535-4386870	0	-	4372535	4386643	789624	21	54,45,54,54,54,54,54,57,87,75,63,42,60,180,63,78,192,163,211,150,309,	0,176,303,547,788,941,1099,1299,1587,2126,2536,2832,2979,6012,6859,7568,8494,10229,10845,11187,14026,
#Deleted in new
chr6_GL000255v2_alt	4380847	4386857	chr6_GL000255v2_alt:4380847-4386857	1	-	4380954	4386643	789624	5	374,163,211,150,296,	0,1917,2533,2875,5714,
#Deleted in new
chr6_GL000255v2_alt	4387990	4395092	chr6_GL000255v2_alt:4387990-4395092	3	-	4389085	4394880	0	10	1243,106,92,133,130,173,180,157,248,447,	0,1358,1776,1983,2320,2847,4175,4721,5582,6655,
#Deleted in new
chr6_GL000255v2_alt	4388005	4395018	chr6_GL000255v2_alt:4388005-4395018	1	-	4389085	4394880	0	10	1228,106,104,133,130,173,180,157,248,373,	0,1343,1761,1968,2305,2832,4160,4706,5567,6640,
#Deleted in new
chr6_GL000255v2_alt	4388623	4395041	chr6_GL000255v2_alt:4388623-4395041	0	-	4392863	4394880	789624	9	610,106,92,133,130,173,180,157,396,	0,725,1143,1350,1687,2214,3542,4088,6022,
#Deleted in new
chr6_GL000255v2_alt	4389067	4389764	chr6_GL000255v2_alt:4389067-4389764	0	-	4389067	4389067	8553170	2	166,416,	0,281,
#Deleted in new
chr6_GL000255v2_alt	4389452	4390842	chr6_GL000255v2_alt:4389452-4390842	0	-	4389766	4390842	789624	5	2,92,58,130,5,	0,314,521,858,1385,
#Deleted in new
chr6_GL000255v2_alt	4390188	4393039	chr6_GL000255v2_alt:4390188-4393039	0	-	4390188	4390188	8553170	3	822,180,328,	0,1977,2523,
#Deleted in new
chr6_GL000255v2_alt	4394004	4394100	chr6_GL000255v2_alt:4394004-4394100	3	+	4394004	4394004	8553170	1	96,	0,
#Deleted in new
chr6_GL000255v2_alt	4394848	4397096	chr6_GL000255v2_alt:4394848-4397096	0	+	4395201	4397096	789624	5	494,169,54,165,133,	0,1300,1627,1818,2115,
#Deleted in new
chr6_GL000255v2_alt	4395229	4398843	chr6_GL000255v2_alt:4395229-4398843	1	+	4395649	4398217	789624	8	113,415,169,54,165,141,197,899,	0,416,919,1246,1437,1734,2084,2715,
#Deleted in new
chr6_GL000255v2_alt	4395276	4398843	chr6_GL000255v2_alt:4395276-4398843	3	+	4395649	4398217	789624	7	784,169,54,165,141,197,899,	0,872,1199,1390,1687,2037,2668,
#Deleted in new
chr6_GL000255v2_alt	4395328	4398843	chr6_GL000255v2_alt:4395328-4398843	0	+	4395328	4395328	8553170	4	732,169,51,544,	0,820,1147,2971,
#Deleted in new
chr6_GL000255v2_alt	4395649	4398843	chr6_GL000255v2_alt:4395649-4398843	0	+	4395649	4395649	8553170	5	411,169,54,32,439,	0,499,826,1017,2755,
#Deleted in new
chr6_GL000255v2_alt	4396658	4398843	chr6_GL000255v2_alt:4396658-4398843	0	+	4396658	4396658	8553170	4	173,141,197,899,	0,305,655,1286,
#Deleted in new
chr6_GL000255v2_alt	4399045	4401239	chr6_GL000255v2_alt:4399045-4401239	3	+	4399072	4401062	0	9	79,218,117,93,86,85,43,75,194,	0,260,579,805,998,1186,1496,1737,2000,
#Deleted in new
chr6_GL000255v2_alt	4399089	4400857	chr6_GL000255v2_alt:4399089-4400857	0	+	4399089	4399089	8553170	7	434,117,93,86,85,43,75,	0,535,761,954,1142,1452,1693,
#Deleted in new
chr6_GL000255v2_alt	4402902	4407130	chr6_GL000255v2_alt:4402902-4407130	3	+	4403230	4406807	789624	7	150,136,161,216,390,274,425,	0,270,1131,1420,2663,3234,3803,
#Deleted in new
chr6_GL000255v2_alt	4403967	4407130	chr6_GL000255v2_alt:4403967-4407130	0	+	4403967	4403967	8553170	5	227,216,390,274,425,	0,355,1598,2169,2738,
#Deleted in new
chr6_GL000255v2_alt	4410112	4410736	chr6_GL000255v2_alt:4410112-4410736	7	+	4410112	4410112	16724991	1	624,	0,
#Deleted in new
chr6_GL000255v2_alt	4432218	4434121	chr6_GL000255v2_alt:4432218-4434121	7	+	4432218	4432218	16724991	3	553,156,286,	0,837,1617,
#Deleted in new
chr6_GL000255v2_alt	4443933	4449341	chr6_GL000255v2_alt:4443933-4449341	3	+	4443933	4443933	789624	5	122,100,96,194,247,	0,256,1082,1979,5161,
#Deleted in new
chr6_GL000255v2_alt	4443983	4446339	chr6_GL000255v2_alt:4443983-4446339	0	+	4443983	4443983	8553170	4	72,100,103,427,	0,206,1025,1929,
#Deleted in new
chr6_GL000255v2_alt	4443995	4449386	chr6_GL000255v2_alt:4443995-4449386	0	+	4443995	4443995	8553170	5	60,100,96,129,292,	0,194,1020,1982,5099,
#Deleted in new
chr6_GL000255v2_alt	4444671	4466311	chr6_GL000255v2_alt:4444671-4466311	3	-	4445240	4466092	789624	20	716,119,112,66,108,96,124,119,156,134,58,133,101,151,176,68,76,53,85,309,	0,1246,1588,13242,13530,13766,14132,14540,16315,16946,17440,17623,17866,18257,18772,19248,19502,19757,19957,21331,
#Deleted in new
chr6_GL000255v2_alt	4444671	4466464	chr6_GL000255v2_alt:4444671-4466464	0	-	4444671	4444671	8553170	18	716,119,112,66,108,96,124,119,156,133,101,151,176,68,76,53,85,143,	0,1246,1588,13242,13530,13766,14132,14540,16315,17623,17866,18257,18772,19248,19502,19757,19957,21650,
#Deleted in new
chr6_GL000255v2_alt	4444671	4466293	chr6_GL000255v2_alt:4444671-4466293	0	-	4465825	4466092	789624	19	716,119,112,66,108,96,124,119,156,134,58,133,101,151,176,68,76,85,740,	0,1246,1588,13242,13530,13766,14132,14540,16315,16946,17440,17623,17866,18257,18772,19248,19502,19957,20882,
#Deleted in new
chr6_GL000255v2_alt	4444678	4446035	chr6_GL000255v2_alt:4444678-4446035	0	+	4444678	4444678	8553170	2	433,36,	0,1321,
#Deleted in new
chr6_GL000255v2_alt	4445005	4458043	chr6_GL000255v2_alt:4445005-4458043	0	-	4445005	4445005	8553170	4	382,119,112,130,	0,912,1254,12908,
#Deleted in new
chr6_GL000255v2_alt	4445210	4458733	chr6_GL000255v2_alt:4445210-4458733	0	-	4445210	4445210	8553170	6	177,119,112,66,108,296,	0,707,1049,12703,12991,13227,
#Deleted in new
chr6_GL000255v2_alt	4446316	4458994	chr6_GL000255v2_alt:4446316-4458994	0	-	4446316	4446316	8553170	5	55,66,97,96,191,	0,11597,11896,12121,12487,
#Deleted in new
chr6_GL000255v2_alt	4457977	4458652	chr6_GL000255v2_alt:4457977-4458652	0	-	4457977	4457977	8553170	2	332,215,	0,460,
#Deleted in new
chr6_GL000255v2_alt	4458508	4461695	chr6_GL000255v2_alt:4458508-4461695	0	-	4458508	4458508	8553170	4	25,527,156,78,	0,295,2478,3109,
#Deleted in new
chr6_GL000255v2_alt	4461895	4462583	chr6_GL000255v2_alt:4461895-4462583	0	-	4461895	4461895	8553170	3	274,133,46,	0,399,642,
#Deleted in new
chr6_GL000255v2_alt	4462299	4466194	chr6_GL000255v2_alt:4462299-4466194	0	-	4462299	4462299	8553170	9	128,101,151,176,68,76,53,85,87,	0,238,629,1144,1620,1874,2129,2329,3808,
#Deleted in new
chr6_GL000255v2_alt	4462300	4466301	chr6_GL000255v2_alt:4462300-4466301	0	-	4462300	4462300	8553170	9	127,101,151,205,68,76,53,85,194,	0,237,628,1143,1619,1873,2128,2328,3807,
#Deleted in new
chr6_GL000255v2_alt	4466426	4470930	chr6_GL000255v2_alt:4466426-4470930	1	+	4466536	4470886	0	6	113,99,87,102,92,120,	0,618,3790,3958,4169,4384,
#Deleted in new
chr6_GL000255v2_alt	4466426	4470930	chr6_GL000255v2_alt:4466426-4470930	3	+	4470405	4470886	789624	6	113,140,87,102,92,120,	0,577,3790,3958,4169,4384,
#Deleted in new
chr6_GL000255v2_alt	4466504	4470925	chr6_GL000255v2_alt:4466504-4470925	0	+	4466504	4466504	8553170	5	35,99,87,303,115,	0,540,3712,3880,4306,
#Deleted in new
chr6_GL000255v2_alt	4466512	4470930	chr6_GL000255v2_alt:4466512-4470930	1	+	4470405	4470886	789624	7	27,99,158,87,102,92,120,	0,532,3407,3704,3872,4083,4298,
#Deleted in new
chr6_GL000255v2_alt	4466515	4470925	chr6_GL000255v2_alt:4466515-4470925	0	+	4466515	4466515	8553170	5	24,99,87,102,330,	0,529,3701,3869,4080,
#Deleted in new
chr6_GL000255v2_alt	4466548	4470930	chr6_GL000255v2_alt:4466548-4470930	0	+	4466548	4466548	8553170	5	595,87,102,92,120,	0,3668,3836,4047,4262,
#Deleted in new
chr6_GL000255v2_alt	4469740	4470930	chr6_GL000255v2_alt:4469740-4470930	0	+	4469740	4469740	8553170	2	563,546,	0,644,
#Deleted in new
chr6_GL000255v2_alt	4470285	4470930	chr6_GL000255v2_alt:4470285-4470930	0	+	4470285	4470285	8553170	3	201,92,120,	0,310,525,
#Deleted in new
chr6_GL000255v2_alt	4471551	4473245	chr6_GL000255v2_alt:4471551-4473245	3	+	4471839	4472976	789624	1	1694,	0,
#Deleted in new
chr6_GL000255v2_alt	4473527	4483951	chr6_GL000255v2_alt:4473527-4483951	3	-	4473695	4483594	789624	15	267,114,96,95,314,100,136,151,105,62,88,113,81,210,426,	0,389,656,1320,1566,7691,7987,8251,8510,8861,9044,9254,9510,9700,9998,
#Deleted in new
chr6_GL000255v2_alt	4473527	4474942	chr6_GL000255v2_alt:4473527-4474942	0	-	4473527	4473527	8553170	3	240,96,95,	0,656,1320,
#Deleted in new
chr6_GL000255v2_alt	4473527	4475271	chr6_GL000255v2_alt:4473527-4475271	0	-	4473527	4473527	8553170	4	503,96,95,178,	0,656,1320,1566,
#Deleted in new
chr6_GL000255v2_alt	4473527	4475331	chr6_GL000255v2_alt:4473527-4475331	0	-	4473527	4473527	8553170	5	267,114,96,95,97,	0,389,656,1320,1707,
#Deleted in new
chr6_GL000255v2_alt	4473990	4481853	chr6_GL000255v2_alt:4473990-4481853	0	-	4473990	4473990	8553170	6	40,96,560,100,136,75,	0,193,857,7228,7524,7788,
#Deleted in new
chr6_GL000255v2_alt	4475335	4483311	chr6_GL000255v2_alt:4475335-4483311	0	-	4475335	4483311	789624	10	72,100,136,151,105,38,88,113,81,84,	0,5883,6179,6443,6702,7053,7236,7446,7702,7892,
#Deleted in new
chr6_GL000255v2_alt	4481666	4482450	chr6_GL000255v2_alt:4481666-4482450	0	-	4481666	4481666	8553170	2	476,62,	0,722,
#Deleted in new
chr6_GL000255v2_alt	4481915	4483671	chr6_GL000255v2_alt:4481915-4483671	0	-	4481915	4481915	8553170	7	14,105,62,323,81,210,146,	0,122,473,656,1122,1312,1610,
#Deleted in new
chr6_GL000255v2_alt	4482087	4483626	chr6_GL000255v2_alt:4482087-4483626	0	-	4482087	4482087	8553170	7	55,62,88,113,131,210,101,	0,301,484,694,900,1140,1438,
#Deleted in new
chr6_GL000255v2_alt	4482479	4483436	chr6_GL000255v2_alt:4482479-4483436	0	-	4482479	4482479	8553170	4	180,113,81,209,	0,302,558,748,
#Deleted in new
chr6_GL000255v2_alt	4483725	4485357	chr6_GL000255v2_alt:4483725-4485357	1	+	4484280	4485269	789624	5	319,151,71,125,218,	0,468,872,1024,1414,
#Deleted in new
chr6_GL000255v2_alt	4484018	4485357	chr6_GL000255v2_alt:4484018-4485357	1	+	4484280	4485269	789624	4	326,71,125,218,	0,579,731,1121,
#Deleted in new
chr6_GL000255v2_alt	4484019	4485299	chr6_GL000255v2_alt:4484019-4485299	0	+	4484019	4484019	8553170	4	33,151,71,550,	0,174,578,730,
#Deleted in new
chr6_GL000255v2_alt	4484020	4485286	chr6_GL000255v2_alt:4484020-4485286	1	+	4484280	4485269	789624	5	32,146,71,125,147,	0,178,577,729,1119,
#Deleted in new
chr6_GL000255v2_alt	4484020	4485358	chr6_GL000255v2_alt:4484020-4485358	1	+	4484280	4485269	789624	5	32,151,71,125,219,	0,173,577,729,1119,
#Deleted in new
chr6_GL000255v2_alt	4484050	4485292	chr6_GL000255v2_alt:4484050-4485292	0	+	4484050	4484050	8553170	2	294,695,	0,547,
#Deleted in new
chr6_GL000255v2_alt	4484196	4492822	chr6_GL000255v2_alt:4484196-4492822	3	+	4484280	4491301	789624	4	148,71,125,1573,	0,401,553,7053,
#Deleted in new
chr6_GL000255v2_alt	4486077	4493745	chr6_GL000255v2_alt:4486077-4493745	3	-	4486525	4493031	789624	18	660,115,291,112,96,122,33,75,69,85,104,252,298,51,179,84,197,455,	0,773,1359,1756,1947,2138,2377,3031,3320,3470,3662,3851,4371,4757,4941,5375,6798,7213,
#Deleted in new
chr6_GL000255v2_alt	4486077	4492942	chr6_GL000255v2_alt:4486077-4492942	0	-	4486077	4486077	8553170	16	660,115,291,287,122,33,75,69,85,104,252,298,51,179,84,67,	0,773,1359,1756,2138,2377,3031,3320,3470,3662,3851,4371,4757,4941,5375,6798,
#Deleted in new
chr6_GL000255v2_alt	4486077	4491524	chr6_GL000255v2_alt:4486077-4491524	0	-	4486077	4486077	8553170	15	660,115,291,112,96,122,33,75,69,85,104,252,51,179,72,	0,773,1359,1756,1947,2138,2377,3031,3320,3470,3662,3851,4757,4941,5375,
#Deleted in new
chr6_GL000255v2_alt	4486077	4493351	chr6_GL000255v2_alt:4486077-4493351	0	-	4486077	4486077	8553170	17	660,115,291,112,96,122,33,75,69,85,104,252,298,51,179,84,61,	0,773,1359,1756,1947,2138,2377,3031,3320,3470,3662,3851,4371,4757,4941,5375,7213,
#Deleted in new
chr6_GL000255v2_alt	4486086	4493396	chr6_GL000255v2_alt:4486086-4493396	0	-	4486086	4486086	8553170	17	651,115,291,112,96,122,33,75,69,85,104,816,50,179,84,197,106,	0,764,1350,1747,1938,2129,2368,3022,3311,3461,3653,3842,4749,4932,5366,6789,7204,
#Deleted in new
chr6_GL000255v2_alt	4486529	4488351	chr6_GL000255v2_alt:4486529-4488351	0	-	4486529	4486529	8553170	5	208,115,291,287,136,	0,321,907,1304,1686,
#Deleted in new
chr6_GL000255v2_alt	4487515	4490044	chr6_GL000255v2_alt:4487515-4490044	0	-	4487515	4487515	8553170	9	212,112,96,272,75,69,85,104,116,	0,318,509,700,1593,1882,2032,2224,2413,
#Deleted in new
chr6_GL000255v2_alt	4490107	4492407	chr6_GL000255v2_alt:4490107-4492407	0	-	4490107	4490107	8553170	5	639,51,179,84,56,	0,727,911,1345,2244,
#Deleted in new
chr6_GL000255v2_alt	4490226	4492414	chr6_GL000255v2_alt:4490226-4492414	0	-	4490226	4490226	8553170	6	520,51,179,84,130,63,	0,608,792,1226,1408,2125,
#Deleted in new
chr6_GL000255v2_alt	4490519	4492113	chr6_GL000255v2_alt:4490519-4492113	0	-	4490519	4490519	8553170	5	227,51,179,84,479,	0,315,499,933,1115,
#Deleted in new
chr6_GL000255v2_alt	4490577	4491807	chr6_GL000255v2_alt:4490577-4491807	0	-	4490577	4490577	8553170	4	169,51,179,355,	0,257,441,875,
#Deleted in new
chr6_GL000255v2_alt	4490864	4493231	chr6_GL000255v2_alt:4490864-4493231	0	-	4490864	4493031	789624	4	21,179,84,356,	0,154,588,2011,
#Deleted in new
chr6_GL000255v2_alt	4494114	4508814	chr6_GL000255v2_alt:4494114-4508814	3	-	4496187	4508468	0	8	2085,35,90,342,399,261,171,383,	0,4271,4444,4613,5305,13529,14006,14317,
#Deleted in new
chr6_GL000255v2_alt	4494114	4508678	chr6_GL000255v2_alt:4494114-4508678	1	-	4496187	4508468	789624	9	2085,35,90,342,399,54,261,171,247,	0,4271,4444,4613,5305,8418,13529,14006,14317,
#Deleted in new
chr6_GL000255v2_alt	4494114	4508671	chr6_GL000255v2_alt:4494114-4508671	0	-	4494114	4494114	8553170	7	2085,35,90,85,185,171,240,	0,4271,4444,4613,13605,14006,14317,
#Deleted in new
chr6_GL000255v2_alt	4494117	4508671	chr6_GL000255v2_alt:4494117-4508671	1	-	4498730	4508468	789624	7	2082,35,90,85,181,171,240,	0,4268,4441,4610,13606,14003,14314,
#Deleted in new
chr6_GL000255v2_alt	4494151	4508483	chr6_GL000255v2_alt:4494151-4508483	0	-	4494151	4494151	8553170	6	364,90,399,261,171,52,	0,4828,5268,13492,13969,14280,
#Deleted in new
chr6_GL000255v2_alt	4498067	4508639	chr6_GL000255v2_alt:4498067-4508639	1	-	4498205	4508468	0	7	353,90,342,399,261,171,208,	0,491,660,1352,9576,10053,10364,
#Deleted in new
chr6_GL000255v2_alt	4498093	4508476	chr6_GL000255v2_alt:4498093-4508476	0	-	4498093	4498093	8553170	4	1725,261,171,45,	0,9550,10027,10338,
#Deleted in new
chr6_GL000255v2_alt	4498205	4508597	chr6_GL000255v2_alt:4498205-4508597	1	-	4498205	4508468	789624	8	12,35,90,342,399,261,171,166,	0,180,353,522,1214,9438,9915,10226,
#Deleted in new
chr6_GL000255v2_alt	4498698	4508468	chr6_GL000255v2_alt:4498698-4508468	0	-	4498698	4498698	8553170	5	371,399,261,171,37,	0,721,8945,9422,9733,
#Deleted in new
chr6_GL000255v2_alt	4499419	4508473	chr6_GL000255v2_alt:4499419-4508473	0	-	4499419	4508468	789624	3	399,171,42,	0,8701,9012,
#Deleted in new
chr6_GL000255v2_alt	4507440	4508382	chr6_GL000255v2_alt:4507440-4508382	0	-	4507440	4507440	8553170	2	464,262,	0,680,
#Deleted in new
chr6_GL000255v2_alt	4508844	4512163	chr6_GL000255v2_alt:4508844-4512163	3	-	4509438	4511343	789624	2	2568,83,	0,3236,
#Deleted in new
chr6_GL000255v2_alt	4510895	4512369	chr6_GL000255v2_alt:4510895-4512369	0	-	4510895	4511343	789624	2	517,64,	0,1410,
#Deleted in new
chr6_GL000255v2_alt	4512986	4517444	chr6_GL000255v2_alt:4512986-4517444	1	-	4513172	4516355	0	8	246,223,475,214,212,832,259,153,	0,440,823,1454,1823,2179,3162,4305,
#Deleted in new
chr6_GL000255v2_alt	4512986	4517440	chr6_GL000255v2_alt:4512986-4517440	3	-	4513172	4516355	0	8	246,223,475,214,212,832,256,149,	0,440,823,1454,1823,2179,3162,4305,
#Deleted in new
chr6_GL000255v2_alt	4512987	4517446	chr6_GL000255v2_alt:4512987-4517446	1	-	4513172	4515979	0	7	245,223,475,214,212,832,155,	0,439,822,1453,1822,2178,4304,
#Deleted in new
chr6_GL000255v2_alt	4512987	4517446	chr6_GL000255v2_alt:4512987-4517446	1	-	4513176	4516355	0	9	245,53,18,475,214,212,832,259,155,	0,439,644,822,1453,1822,2178,3161,4304,
#Deleted in new
chr6_GL000255v2_alt	4513962	4517360	chr6_GL000255v2_alt:4513962-4517360	0	-	4513962	4513962	8553170	4	322,214,212,69,	0,478,847,3329,
#Deleted in new
chr6_GL000255v2_alt	4514014	4516299	chr6_GL000255v2_alt:4514014-4516299	0	-	4514014	4514014	8553170	4	270,214,212,151,	0,426,795,2134,
#Deleted in new
chr6_GL000255v2_alt	4514093	4514890	chr6_GL000255v2_alt:4514093-4514890	0	-	4514093	4514093	8553170	2	191,450,	0,347,
#Deleted in new
chr6_GL000255v2_alt	4515298	4517348	chr6_GL000255v2_alt:4515298-4517348	0	-	4515298	4515298	8553170	2	699,57,	0,1993,
#Deleted in new
chr6_GL000255v2_alt	4515669	4517375	chr6_GL000255v2_alt:4515669-4517375	0	-	4515669	4516355	789624	3	328,290,84,	0,479,1622,
#Deleted in new
chr6_GL000255v2_alt	4515815	4523665	chr6_GL000255v2_alt:4515815-4523665	0	-	4515815	4516355	789624	4	182,259,60,250,	0,333,2585,7600,
#Deleted in new
chr6_GL000255v2_alt	4516040	4517387	chr6_GL000255v2_alt:4516040-4517387	0	-	4516040	4516040	8553170	2	367,96,	0,1251,
#Deleted in new
chr6_GL000255v2_alt	4516211	4517233	chr6_GL000255v2_alt:4516211-4517233	0	-	4516211	4516355	789624	2	196,175,	0,847,
#Deleted in new
chr6_GL000255v2_alt	4518057	4523698	chr6_GL000255v2_alt:4518057-4523698	0	-	4518057	4518057	8553170	3	237,60,283,	0,343,5358,
#Deleted in new
chr6_GL000255v2_alt	4533405	4533923	chr6_GL000255v2_alt:4533405-4533923	7	+	4533405	4533405	16724991	1	518,	0,
#Deleted in new
chr6_GL000255v2_alt	4559969	4560665	chr6_GL000255v2_alt:4559969-4560665	7	-	4559969	4559969	16724991	1	696,	0,
#Deleted in new
chr6_GL000255v2_alt	4583781	4583883	chr6_GL000255v2_alt:4583781-4583883	7	-	4583781	4583781	16724991	1	102,	0,
#Deleted in new
chr6_GL000255v2_alt	4585943	4604310	chr6_GL000255v2_alt:4585943-4604310	3	+	4586393	4604088	0	11	462,138,100,54,51,401,780,291,74,76,267,	0,6485,6744,11768,11939,12183,13306,14650,15046,15254,18100,
#Deleted in new
chr6_GL000255v2_alt	4586268	4598257	chr6_GL000255v2_alt:4586268-4598257	0	+	4586393	4598257	789624	7	137,138,100,123,54,51,131,	0,6160,6419,8522,11443,11614,11858,
#Deleted in new
chr6_GL000255v2_alt	4594457	4594955	chr6_GL000255v2_alt:4594457-4594955	7	-	4594457	4594457	16724991	1	498,	0,
#Deleted in new
chr6_GL000255v2_alt	4594489	4598264	chr6_GL000255v2_alt:4594489-4598264	0	+	4594489	4594489	8553170	4	424,54,51,138,	0,3222,3393,3637,
#Deleted in new
chr6_GL000255v2_alt	4600618	4601488	chr6_GL000255v2_alt:4600618-4601488	0	+	4600618	4600618	8553170	3	266,74,291,	0,371,579,
#Deleted in new
chr6_GL000255v2_alt	4604784	4605630	chr6_GL000255v2_alt:4604784-4605630	0	+	4604784	4604784	8553170	2	107,50,	0,796,
#Deleted in new
chr6_GL000255v2_alt	4605104	4605630	chr6_GL000255v2_alt:4605104-4605630	3	+	4605104	4605104	8553170	1	526,	0,
#Deleted in new
chr6_GL000255v2_alt	4605165	4605302	chr6_GL000255v2_alt:4605165-4605302	0	+	4605165	4605165	8553170	1	137,	0,
#Deleted in new
chr6_GL000255v2_alt	4605172	4605302	chr6_GL000255v2_alt:4605172-4605302	0	+	4605172	4605172	8553170	1	130,	0,
#Deleted in new
chr6_GL000255v2_alt	4605375	4605630	chr6_GL000255v2_alt:4605375-4605630	0	+	4605375	4605375	8553170	1	255,	0,
#Deleted in new
chr6_GL000255v2_alt	4605375	4605630	chr6_GL000255v2_alt:4605375-4605630	0	+	4605375	4605375	8553170	1	255,	0,
#Deleted in new
chr6_GL000255v2_alt	4605442	4605630	chr6_GL000255v2_alt:4605442-4605630	0	+	4605442	4605442	8553170	1	188,	0,
#Deleted in new
chr6_GL000256v2_alt	41352	42240	chr6_GL000256v2_alt:41352-42240	7	+	41352	41352	16724991	1	888,	0,
#Deleted in new
chr6_GL000256v2_alt	92971	93343	chr6_GL000256v2_alt:92971-93343	7	-	92971	92971	16724991	1	372,	0,
#Deleted in new
chr6_GL000256v2_alt	147116	148254	chr6_GL000256v2_alt:147116-148254	3	-	147116	147116	8553170	2	452,257,	0,881,
#Deleted in new
chr6_GL000256v2_alt	168872	172595	chr6_GL000256v2_alt:168872-172595	3	-	168872	168872	8553170	2	2391,67,	0,3656,
#Deleted in new
chr6_GL000256v2_alt	170663	171295	chr6_GL000256v2_alt:170663-171295	7	+	170663	170663	16724991	1	632,	0,
#Deleted in new
chr6_GL000256v2_alt	198242	199317	chr6_GL000256v2_alt:198242-199317	7	-	198242	198242	16724991	1	1075,	0,
#Deleted in new
chr6_GL000256v2_alt	205932	206723	chr6_GL000256v2_alt:205932-206723	3	+	205932	205932	789624	2	199,212,	0,579,
#Deleted in new
chr6_GL000256v2_alt	212403	233316	chr6_GL000256v2_alt:212403-233316	1	-	213471	233025	789624	8	1664,27,33,116,23,231,96,711,	0,4234,5802,5967,8686,17002,18881,20202,
#Deleted in new
chr6_GL000256v2_alt	212403	218386	chr6_GL000256v2_alt:212403-218386	0	-	213471	218386	789624	5	1664,27,72,33,16,	0,4234,4490,5802,5967,
#Deleted in new
chr6_GL000256v2_alt	212403	233381	chr6_GL000256v2_alt:212403-233381	3	-	213656	233025	789624	9	1272,112,27,33,116,23,231,96,776,	0,1552,4234,5802,5967,8686,17002,18881,20202,
#Deleted in new
chr6_GL000256v2_alt	212403	233306	chr6_GL000256v2_alt:212403-233306	0	-	212403	212403	8553170	6	5835,116,23,231,96,701,	0,5967,8686,17002,18881,20202,
#Deleted in new
chr6_GL000256v2_alt	213875	216986	chr6_GL000256v2_alt:213875-216986	0	-	213875	213875	8553170	2	192,349,	0,2762,
#Deleted in new
chr6_GL000256v2_alt	220698	231369	chr6_GL000256v2_alt:220698-231369	0	-	220698	220698	8553170	3	414,231,85,	0,8707,10586,
#Deleted in new
chr6_GL000256v2_alt	224169	229577	chr6_GL000256v2_alt:224169-229577	0	-	224169	224169	8553170	2	515,172,	0,5236,
#Deleted in new
chr6_GL000256v2_alt	225037	225137	chr6_GL000256v2_alt:225037-225137	3	+	225037	225037	8553170	1	100,	0,
#Deleted in new
chr6_GL000256v2_alt	253272	253933	chr6_GL000256v2_alt:253272-253933	3	+	253299	253683	789624	2	150,316,	0,345,
#Deleted in new
chr6_GL000256v2_alt	278514	279845	chr6_GL000256v2_alt:278514-279845	7	-	278514	278514	16724991	1	1331,	0,
#Deleted in new
chr6_GL000256v2_alt	286925	287224	chr6_GL000256v2_alt:286925-287224	3	+	286925	286925	8553170	1	299,	0,
#Deleted in new
chr6_GL000256v2_alt	295658	296940	chr6_GL000256v2_alt:295658-296940	3	+	295658	295658	8553170	3	30,194,808,	0,110,474,
#Deleted in new
chr6_GL000256v2_alt	296255	297995	chr6_GL000256v2_alt:296255-297995	3	+	296255	296255	8553170	2	80,237,	0,1503,
#Deleted in new
chr6_GL000256v2_alt	304249	314620	chr6_GL000256v2_alt:304249-314620	3	-	304465	313419	789624	7	1802,105,127,92,82,269,253,	0,3949,4702,5171,8728,9161,10118,
#Deleted in new
chr6_GL000256v2_alt	304249	314674	chr6_GL000256v2_alt:304249-314674	0	-	304249	304249	8553170	6	1802,105,561,82,168,307,	0,3949,4702,8728,9113,10118,
#Deleted in new
chr6_GL000256v2_alt	336038	336966	chr6_GL000256v2_alt:336038-336966	7	-	336038	336038	16724991	1	928,	0,
#Deleted in new
chr6_GL000256v2_alt	353569	354597	chr6_GL000256v2_alt:353569-354597	3	-	353569	354532	789624	1	1028,	0,
#Deleted in new
chr6_GL000256v2_alt	373357	385887	chr6_GL000256v2_alt:373357-385887	3	+	373357	385887	789624	3	133,52,229,	0,1124,12301,
#Deleted in new
chr6_GL000256v2_alt	381186	381962	chr6_GL000256v2_alt:381186-381962	7	-	381186	381186	16724991	1	776,	0,
#Deleted in new
chr6_GL000256v2_alt	385935	386531	chr6_GL000256v2_alt:385935-386531	7	-	385935	385935	16724991	1	596,	0,
#Deleted in new
chr6_GL000256v2_alt	395669	396676	chr6_GL000256v2_alt:395669-396676	3	-	395669	396611	789624	1	1007,	0,
#Deleted in new
chr6_GL000256v2_alt	410312	411251	chr6_GL000256v2_alt:410312-411251	7	+	410312	410312	16724991	1	939,	0,
#Deleted in new
chr6_GL000256v2_alt	421254	422190	chr6_GL000256v2_alt:421254-422190	3	+	421254	422190	789624	1	936,	0,
#Deleted in new
chr6_GL000256v2_alt	433572	438270	chr6_GL000256v2_alt:433572-438270	3	+	433572	433572	8553170	2	137,252,	0,4446,
#Deleted in new
chr6_GL000256v2_alt	447238	448175	chr6_GL000256v2_alt:447238-448175	7	-	447238	447238	16724991	1	937,	0,
#Deleted in new
chr6_GL000256v2_alt	482670	483942	chr6_GL000256v2_alt:482670-483942	3	+	483003	483942	789624	1	1272,	0,
#Deleted in new
chr6_GL000256v2_alt	490893	491829	chr6_GL000256v2_alt:490893-491829	7	+	490893	490893	16724991	1	936,	0,
#Deleted in new
chr6_GL000256v2_alt	524651	525589	chr6_GL000256v2_alt:524651-525589	7	+	524651	524651	16724991	1	938,	0,
#Deleted in new
chr6_GL000256v2_alt	533382	576486	chr6_GL000256v2_alt:533382-576486	3	+	533382	533382	789624	3	79,230,155,	0,39850,42949,
#Deleted in new
chr6_GL000256v2_alt	538636	539567	chr6_GL000256v2_alt:538636-539567	7	-	538636	538636	16724991	1	931,	0,
#Deleted in new
chr6_GL000256v2_alt	572103	573480	chr6_GL000256v2_alt:572103-573480	7	-	572103	572103	16724991	2	291,588,	0,789,
#Deleted in new
chr6_GL000256v2_alt	577862	578822	chr6_GL000256v2_alt:577862-578822	7	-	577862	577862	16724991	1	960,	0,
#Deleted in new
chr6_GL000256v2_alt	600129	601072	chr6_GL000256v2_alt:600129-601072	7	+	600129	600129	16724991	1	943,	0,
#Deleted in new
chr6_GL000256v2_alt	616122	617088	chr6_GL000256v2_alt:616122-617088	3	+	616122	617088	789624	1	966,	0,
#Deleted in new
chr6_GL000256v2_alt	639064	640500	chr6_GL000256v2_alt:639064-640500	7	-	639064	639064	16724991	1	1436,	0,
#Deleted in new
chr6_GL000256v2_alt	664680	715566	chr6_GL000256v2_alt:664680-715566	1	-	664680	665646	789624	2	1048,69,	0,50817,
#Deleted in new
chr6_GL000256v2_alt	664680	740978	chr6_GL000256v2_alt:664680-740978	3	-	664680	665646	789624	4	1048,76,38,104,	0,66939,67357,76194,
#Deleted in new
chr6_GL000256v2_alt	664680	665728	chr6_GL000256v2_alt:664680-665728	1	-	664680	665646	789624	1	1048,	0,
#Deleted in new
chr6_GL000256v2_alt	682547	759110	chr6_GL000256v2_alt:682547-759110	3	-	683461	684412	789624	2	1869,142,	0,76421,
#Deleted in new
chr6_GL000256v2_alt	682547	684416	chr6_GL000256v2_alt:682547-684416	1	-	683461	684412	789624	1	1869,	0,
#Deleted in new
chr6_GL000256v2_alt	705559	706628	chr6_GL000256v2_alt:705559-706628	3	+	705704	706628	789624	1	1069,	0,
#Deleted in new
chr6_GL000256v2_alt	726292	727239	chr6_GL000256v2_alt:726292-727239	7	+	726292	726292	16724991	2	582,270,	0,677,
#Deleted in new
chr6_GL000256v2_alt	734514	737477	chr6_GL000256v2_alt:734514-737477	1	-	735704	736652	789624	2	2229,253,	0,2710,
#Deleted in new
chr6_GL000256v2_alt	734514	766084	chr6_GL000256v2_alt:734514-766084	3	-	735704	736652	789624	5	2229,48,125,124,85,	0,3409,4797,6360,31485,
#Deleted in new
chr6_GL000256v2_alt	734514	736743	chr6_GL000256v2_alt:734514-736743	1	-	735704	736652	789624	1	2229,	0,
#Deleted in new
chr6_GL000256v2_alt	748316	749965	chr6_GL000256v2_alt:748316-749965	3	+	749026	749965	789624	1	1649,	0,
#Deleted in new
chr6_GL000256v2_alt	748949	749988	chr6_GL000256v2_alt:748949-749988	1	+	749020	749965	789624	1	1039,	0,
#Deleted in new
chr6_GL000256v2_alt	766193	773341	chr6_GL000256v2_alt:766193-773341	3	+	770782	771733	789624	4	27,116,51,2830,	0,1273,3223,4318,
#Deleted in new
chr6_GL000256v2_alt	766200	773341	chr6_GL000256v2_alt:766200-773341	1	+	770782	771733	789624	4	20,116,51,2834,	0,1266,3216,4307,
#Deleted in new
chr6_GL000256v2_alt	766215	770099	chr6_GL000256v2_alt:766215-770099	0	+	766215	766215	8553170	4	5,116,164,211,	0,1251,2818,3673,
#Deleted in new
chr6_GL000256v2_alt	768783	773341	chr6_GL000256v2_alt:768783-773341	1	+	770782	771733	789624	3	414,1259,580,	0,1704,3978,
#Deleted in new
chr6_GL000256v2_alt	770452	771746	chr6_GL000256v2_alt:770452-771746	1	+	770782	771733	789624	1	1294,	0,
#Deleted in new
chr6_GL000256v2_alt	770507	771733	chr6_GL000256v2_alt:770507-771733	0	+	770507	770507	8553170	2	256,717,	0,509,
#Deleted in new
chr6_GL000256v2_alt	770507	771733	chr6_GL000256v2_alt:770507-771733	0	+	770507	770507	8553170	2	256,730,	0,496,
#Deleted in new
chr6_GL000256v2_alt	773608	778817	chr6_GL000256v2_alt:773608-778817	7	-	773608	773608	16724991	2	359,22,	0,5187,
#Deleted in new
chr6_GL000256v2_alt	784035	785082	chr6_GL000256v2_alt:784035-785082	7	-	784035	784035	16724991	1	1047,	0,
#Deleted in new
chr6_GL000256v2_alt	795776	796913	chr6_GL000256v2_alt:795776-796913	3	-	795776	796913	789624	1	1137,	0,
#Deleted in new
chr6_GL000256v2_alt	798281	798687	chr6_GL000256v2_alt:798281-798687	7	-	798281	798281	16724991	1	406,	0,
#Deleted in new
chr6_GL000256v2_alt	806519	819567	chr6_GL000256v2_alt:806519-819567	3	+	806519	806519	8553170	4	31,57,500,289,	0,7812,9660,12759,
#Deleted in new
chr6_GL000256v2_alt	838435	842584	chr6_GL000256v2_alt:838435-842584	3	+	838435	838435	789624	3	165,95,2517,	0,529,1632,
#Deleted in new
chr6_GL000256v2_alt	838491	841173	chr6_GL000256v2_alt:838491-841173	0	+	838491	838491	8553170	4	109,95,117,78,	0,473,1576,2604,
#Deleted in new
chr6_GL000256v2_alt	846719	847803	chr6_GL000256v2_alt:846719-847803	7	-	846719	846719	16724991	1	1084,	0,
#Deleted in new
chr6_GL000256v2_alt	945096	945380	chr6_GL000256v2_alt:945096-945380	7	-	945096	945096	16724991	1	284,	0,
#Deleted in new
chr6_GL000256v2_alt	966015	981402	chr6_GL000256v2_alt:966015-981402	3	+	966244	980217	0	7	317,348,114,21,21,21,1199,	0,2333,9167,10658,10919,13717,14188,
#Deleted in new
chr6_GL000256v2_alt	966033	981404	chr6_GL000256v2_alt:966033-981404	1	+	966244	980217	0	8	299,348,114,21,21,117,21,1201,	0,2315,9149,10640,10901,13279,13699,14170,
#Deleted in new
chr6_GL000256v2_alt	966082	975291	chr6_GL000256v2_alt:966082-975291	0	+	966082	966082	8553170	3	250,343,109,	0,2271,9100,
#Deleted in new
chr6_GL000256v2_alt	966126	981404	chr6_GL000256v2_alt:966126-981404	1	+	966244	979911	0	7	206,348,114,21,21,117,1672,	0,2222,9056,10547,10808,13186,13606,
#Deleted in new
chr6_GL000256v2_alt	966164	968954	chr6_GL000256v2_alt:966164-968954	0	+	966164	966164	8553170	2	168,606,	0,2184,
#Deleted in new
chr6_GL000256v2_alt	966244	981404	chr6_GL000256v2_alt:966244-981404	1	+	966244	980482	0	8	88,348,114,21,21,48,21,951,	0,2104,8938,10429,10690,12961,13488,14209,
#Deleted in new
chr6_GL000256v2_alt	966244	981404	chr6_GL000256v2_alt:966244-981404	1	+	966244	980217	0	7	88,114,21,21,117,21,1201,	0,8938,10429,10690,13068,13488,13959,
#Deleted in new
chr6_GL000256v2_alt	966244	981404	chr6_GL000256v2_alt:966244-981404	1	+	966244	980217	0	8	88,348,114,21,21,48,21,1201,	0,2104,8938,10429,10690,12961,13488,13959,
#Deleted in new
chr6_GL000256v2_alt	966244	981404	chr6_GL000256v2_alt:966244-981404	1	+	966244	980482	789624	8	88,348,114,21,21,117,21,951,	0,2104,8938,10429,10690,13068,13488,14209,
#Deleted in new
chr6_GL000256v2_alt	966244	981404	chr6_GL000256v2_alt:966244-981404	1	+	966244	980482	0	7	88,348,114,21,21,21,951,	0,2104,8938,10429,10690,13488,14209,
#Deleted in new
chr6_GL000256v2_alt	966250	981404	chr6_GL000256v2_alt:966250-981404	0	+	966250	980482	0	6	82,348,114,21,21,951,	0,2098,8932,10423,10684,14203,
#Deleted in new
chr6_GL000256v2_alt	968348	981404	chr6_GL000256v2_alt:968348-981404	0	+	968348	980217	789624	6	348,114,21,21,21,1201,	0,6834,8325,8586,11384,11855,
#Deleted in new
chr6_GL000256v2_alt	968348	981404	chr6_GL000256v2_alt:968348-981404	0	+	968348	968348	8553170	8	348,138,114,21,21,117,21,951,	0,5311,6834,8325,8586,10964,11384,12105,
#Deleted in new
chr6_GL000256v2_alt	968348	981404	chr6_GL000256v2_alt:968348-981404	0	+	968348	968348	8553170	8	348,138,114,21,21,117,21,1201,	0,5311,6834,8325,8586,10964,11384,11855,
#Deleted in new
chr6_GL000256v2_alt	981423	986184	chr6_GL000256v2_alt:981423-986184	1	-	981531	986033	789624	4	1367,102,127,274,	0,2993,3540,4487,
#Deleted in new
chr6_GL000256v2_alt	981514	990140	chr6_GL000256v2_alt:981514-990140	3	-	981531	986033	789624	6	1276,102,127,33,393,49,	0,2902,3449,4396,4489,8577,
#Deleted in new
chr6_GL000256v2_alt	981531	986332	chr6_GL000256v2_alt:981531-986332	1	-	981531	986332	789624	4	1126,67,145,21,	0,2920,3432,4780,
#Deleted in new
chr6_GL000256v2_alt	1017161	1017584	chr6_GL000256v2_alt:1017161-1017584	7	-	1017161	1017161	16724991	1	423,	0,
#Deleted in new
chr6_GL000256v2_alt	1029073	1032759	chr6_GL000256v2_alt:1029073-1032759	1	+	1029722	1032640	789624	8	186,222,270,276,276,117,33,124,	0,491,843,1358,2189,2605,3169,3562,
#Deleted in new
chr6_GL000256v2_alt	1029239	1030230	chr6_GL000256v2_alt:1029239-1030230	7	-	1029239	1029239	16724991	1	991,	0,
#Deleted in new
chr6_GL000256v2_alt	1029537	1030490	chr6_GL000256v2_alt:1029537-1030490	0	+	1029722	1030490	789624	3	249,270,59,	0,379,894,
#Deleted in new
chr6_GL000256v2_alt	1029598	1032758	chr6_GL000256v2_alt:1029598-1032758	1	+	1029722	1032640	789624	7	188,270,276,276,117,33,123,	0,318,833,1664,2080,2644,3037,
#Deleted in new
chr6_GL000256v2_alt	1029650	1030674	chr6_GL000256v2_alt:1029650-1030674	0	+	1029650	1029650	8553170	2	536,243,	0,781,
#Deleted in new
chr6_GL000256v2_alt	1029666	1033525	chr6_GL000256v2_alt:1029666-1033525	3	+	1029722	1033404	789624	7	120,270,276,276,117,33,414,	0,250,765,1596,2012,2576,3445,
#Deleted in new
chr6_GL000256v2_alt	1029685	1032759	chr6_GL000256v2_alt:1029685-1032759	0	+	1029685	1029685	8553170	5	28,187,117,33,124,	0,1666,1993,2557,2950,
#Deleted in new
chr6_GL000256v2_alt	1029692	1031319	chr6_GL000256v2_alt:1029692-1031319	0	+	1029692	1029692	8553170	4	94,158,276,57,	0,336,739,1570,
#Deleted in new
chr6_GL000256v2_alt	1029722	1032759	chr6_GL000256v2_alt:1029722-1032759	1	+	1029722	1032640	0	6	64,270,276,117,33,124,	0,194,709,1956,2520,2913,
#Deleted in new
chr6_GL000256v2_alt	1029762	1030611	chr6_GL000256v2_alt:1029762-1030611	0	+	1029762	1029762	8553170	2	424,163,	0,686,
#Deleted in new
chr6_GL000256v2_alt	1030198	1031531	chr6_GL000256v2_alt:1030198-1031531	0	+	1030198	1030198	8553170	2	509,269,	0,1064,
#Deleted in new
chr6_GL000256v2_alt	1030297	1032759	chr6_GL000256v2_alt:1030297-1032759	0	+	1030297	1032640	789624	6	44,202,276,117,33,124,	0,208,965,1381,1945,2338,
#Deleted in new
chr6_GL000256v2_alt	1030415	1032759	chr6_GL000256v2_alt:1030415-1032759	0	+	1030415	1030415	8553170	4	292,276,117,517,	0,847,1263,1827,
#Deleted in new
chr6_GL000256v2_alt	1031285	1044770	chr6_GL000256v2_alt:1031285-1044770	0	+	1031285	1031285	8553170	5	253,117,33,67,153,	0,393,957,13078,13332,
#Deleted in new
chr6_GL000256v2_alt	1031685	1035579	chr6_GL000256v2_alt:1031685-1035579	0	+	1031685	1031685	8553170	2	110,1394,	0,2500,
#Deleted in new
chr6_GL000256v2_alt	1031765	1033525	chr6_GL000256v2_alt:1031765-1033525	0	+	1031765	1033404	789624	3	30,51,414,	0,459,1346,
#Deleted in new
chr6_GL000256v2_alt	1032829	1055278	chr6_GL000256v2_alt:1032829-1055278	0	-	1032829	1032829	789624	6	539,131,471,336,278,150,	0,1763,11378,11963,20555,22299,
#Deleted in new
chr6_GL000256v2_alt	1032897	1033368	chr6_GL000256v2_alt:1032897-1033368	7	-	1032897	1032897	16724991	1	471,	0,
#Deleted in new
chr6_GL000256v2_alt	1041269	1055222	chr6_GL000256v2_alt:1041269-1055222	3	-	1041269	1041269	8553170	6	1786,236,121,336,255,94,	0,2938,3307,3523,10442,13859,
#Deleted in new
chr6_GL000256v2_alt	1044000	1044686	chr6_GL000256v2_alt:1044000-1044686	0	-	1044000	1044000	8553170	2	443,110,	0,576,
#Deleted in new
chr6_GL000256v2_alt	1047969	1055198	chr6_GL000256v2_alt:1047969-1055198	7	-	1047969	1047969	16724991	6	125,144,315,285,255,70,	0,2278,2536,3219,3742,7159,
#Deleted in new
chr6_GL000256v2_alt	1054517	1054742	chr6_GL000256v2_alt:1054517-1054742	7	+	1054517	1054517	16724991	1	225,	0,
#Deleted in new
chr6_GL000256v2_alt	1056954	1057375	chr6_GL000256v2_alt:1056954-1057375	7	-	1056954	1056954	16724991	1	421,	0,
#Deleted in new
chr6_GL000256v2_alt	1097502	1103842	chr6_GL000256v2_alt:1097502-1103842	7	+	1097502	1097502	16724991	7	47,68,196,450,191,2076,456,	0,355,758,1085,1999,2361,5884,
#Deleted in new
chr6_GL000256v2_alt	1097903	1098901	chr6_GL000256v2_alt:1097903-1098901	7	-	1097903	1097903	16724991	1	998,	0,
#Deleted in new
chr6_GL000256v2_alt	1098056	1103842	chr6_GL000256v2_alt:1098056-1103842	5	+	1098056	1098056	16724991	3	400,270,615,	0,531,5171,
#Deleted in new
chr6_GL000256v2_alt	1098373	1103842	chr6_GL000256v2_alt:1098373-1103842	5	+	1098373	1098373	16724991	3	83,270,4341,	0,214,1128,
#Deleted in new
chr6_GL000256v2_alt	1098384	1099287	chr6_GL000256v2_alt:1098384-1099287	5	+	1098384	1098384	16724991	3	72,270,192,	0,203,711,
#Deleted in new
chr6_GL000256v2_alt	1106449	1108480	chr6_GL000256v2_alt:1106449-1108480	7	+	1106449	1106449	16724991	5	258,276,117,37,68,	0,847,1247,1776,1963,
#Deleted in new
chr6_GL000256v2_alt	1109229	1110026	chr6_GL000256v2_alt:1109229-1110026	7	-	1109229	1109229	16724991	1	797,	0,
#Deleted in new
chr6_GL000256v2_alt	1118599	1118731	chr6_GL000256v2_alt:1118599-1118731	7	-	1118599	1118599	16724991	1	132,	0,
#Deleted in new
chr6_GL000256v2_alt	1132997	1137170	chr6_GL000256v2_alt:1132997-1137170	3	+	1133069	1136413	789624	8	78,82,270,276,276,117,33,372,	0,869,1080,1576,2451,2849,3411,3801,
#Deleted in new
chr6_GL000256v2_alt	1133009	1137167	chr6_GL000256v2_alt:1133009-1137167	1	+	1133875	1136413	0	8	66,185,270,276,276,117,92,300,	0,754,1068,1564,2439,2837,3399,3858,
#Deleted in new
chr6_GL000256v2_alt	1133415	1134396	chr6_GL000256v2_alt:1133415-1134396	7	-	1133415	1133415	16724991	1	981,	0,
#Deleted in new
chr6_GL000256v2_alt	1133851	1137170	chr6_GL000256v2_alt:1133851-1137170	1	+	1133875	1136413	0	7	97,270,276,276,117,33,372,	0,226,722,1597,1995,2557,2947,
#Deleted in new
chr6_GL000256v2_alt	1133875	1137170	chr6_GL000256v2_alt:1133875-1137170	1	+	1133875	1136413	789624	7	73,270,276,117,33,48,372,	0,202,1573,1971,2533,2708,2923,
#Deleted in new
chr6_GL000256v2_alt	1133875	1137170	chr6_GL000256v2_alt:1133875-1137170	1	+	1133875	1136413	789624	6	73,270,276,117,33,372,	0,202,1573,1971,2533,2923,
#Deleted in new
chr6_GL000256v2_alt	1133875	1137170	chr6_GL000256v2_alt:1133875-1137170	1	+	1133875	1136413	0	5	73,270,117,33,372,	0,202,1971,2533,2923,
#Deleted in new
chr6_GL000256v2_alt	1133875	1137170	chr6_GL000256v2_alt:1133875-1137170	0	+	1133875	1133875	8553170	6	73,270,276,515,33,372,	0,202,698,1573,2533,2923,
#Deleted in new
chr6_GL000256v2_alt	1157884	1158029	chr6_GL000256v2_alt:1157884-1158029	7	-	1157884	1157884	16724991	1	145,	0,
#Deleted in new
chr6_GL000256v2_alt	1187129	1188092	chr6_GL000256v2_alt:1187129-1188092	7	-	1187129	1187129	16724991	1	963,	0,
#Deleted in new
chr6_GL000256v2_alt	1187587	1190304	chr6_GL000256v2_alt:1187587-1190304	7	+	1187587	1187587	16724991	7	67,270,276,275,117,33,44,	0,191,703,1564,1941,2498,2673,
#Deleted in new
chr6_GL000256v2_alt	1196376	1197508	chr6_GL000256v2_alt:1196376-1197508	7	+	1196376	1196376	16724991	4	272,107,37,39,	0,397,908,1093,
#Deleted in new
chr6_GL000256v2_alt	1206269	1206636	chr6_GL000256v2_alt:1206269-1206636	7	+	1206269	1206269	16724991	2	135,57,	0,310,
#Deleted in new
chr6_GL000256v2_alt	1207509	1208372	chr6_GL000256v2_alt:1207509-1208372	7	-	1207509	1207509	16724991	2	161,167,	0,696,
#Deleted in new
chr6_GL000256v2_alt	1225672	1226663	chr6_GL000256v2_alt:1225672-1226663	7	-	1225672	1225672	16724991	1	991,	0,
#Deleted in new
chr6_GL000256v2_alt	1226148	1228926	chr6_GL000256v2_alt:1226148-1228926	7	+	1226148	1226148	16724991	6	72,261,275,265,117,47,	0,201,719,1605,2000,2731,
#Deleted in new
chr6_GL000256v2_alt	1232035	1232220	chr6_GL000256v2_alt:1232035-1232220	7	+	1232035	1232035	16724991	1	185,	0,
#Deleted in new
chr6_GL000256v2_alt	1239072	1243714	chr6_GL000256v2_alt:1239072-1243714	1	+	1240367	1243285	789624	10	60,131,223,270,276,276,117,33,48,434,	0,707,1145,1497,2008,2884,3259,3816,3991,4208,
#Deleted in new
chr6_GL000256v2_alt	1239480	1307767	chr6_GL000256v2_alt:1239480-1307767	3	+	1240367	1306956	789624	10	65,187,270,276,276,33,84,93,35,281,	0,773,1089,1600,2476,16165,66944,67471,67920,68006,
#Deleted in new
chr6_GL000256v2_alt	1239888	1240880	chr6_GL000256v2_alt:1239888-1240880	7	-	1239888	1239888	16724991	1	992,	0,
#Deleted in new
chr6_GL000256v2_alt	1240058	1243714	chr6_GL000256v2_alt:1240058-1243714	0	+	1240058	1240058	8553170	8	382,270,276,276,137,33,48,434,	0,511,1022,1898,2273,2830,3005,3222,
#Deleted in new
chr6_GL000256v2_alt	1240283	1243714	chr6_GL000256v2_alt:1240283-1243714	1	+	1240367	1243285	789624	8	157,270,276,276,117,33,48,434,	0,286,797,1673,2048,2605,2780,2997,
#Deleted in new
chr6_GL000256v2_alt	1240283	1243714	chr6_GL000256v2_alt:1240283-1243714	1	+	1240367	1243285	789624	7	157,270,276,276,33,48,434,	0,286,797,1673,2605,2780,2997,
#Deleted in new
chr6_GL000256v2_alt	1240361	1243714	chr6_GL000256v2_alt:1240361-1243714	0	+	1240361	1240361	8553170	7	79,98,259,276,590,48,434,	0,208,736,1595,1970,2702,2919,
#Deleted in new
chr6_GL000256v2_alt	1240362	1243714	chr6_GL000256v2_alt:1240362-1243714	1	+	1240367	1243285	789624	5	78,270,276,276,434,	0,207,718,1594,2918,
#Deleted in new
chr6_GL000256v2_alt	1240365	1243714	chr6_GL000256v2_alt:1240365-1243714	0	+	1240365	1240365	8553170	7	75,787,276,117,29,48,434,	0,204,1591,1966,2527,2698,2915,
#Deleted in new
chr6_GL000256v2_alt	1240367	1243111	chr6_GL000256v2_alt:1240367-1243111	0	+	1240367	1240367	8553170	6	73,787,276,137,33,48,	0,202,1589,1964,2521,2696,
#Deleted in new
chr6_GL000256v2_alt	1240367	1243111	chr6_GL000256v2_alt:1240367-1243111	0	+	1240367	1240367	8553170	6	73,787,276,117,33,48,	0,202,1589,1964,2521,2696,
#Deleted in new
chr6_GL000256v2_alt	1254413	1256379	chr6_GL000256v2_alt:1254413-1256379	7	+	1254413	1254413	16724991	5	261,275,154,37,46,	0,843,1234,1734,1920,
#Deleted in new
chr6_GL000256v2_alt	1268595	1270259	chr6_GL000256v2_alt:1268595-1270259	7	-	1268595	1268595	16724991	3	276,281,256,	0,887,1408,
#Deleted in new
chr6_GL000256v2_alt	1272917	1276211	chr6_GL000256v2_alt:1272917-1276211	3	+	1272917	1272917	789624	3	398,64,193,	0,2537,3101,
#Deleted in new
chr6_GL000256v2_alt	1291014	1291411	chr6_GL000256v2_alt:1291014-1291411	7	+	1291014	1291014	16724991	2	123,135,	0,262,
#Deleted in new
chr6_GL000256v2_alt	1292242	1293120	chr6_GL000256v2_alt:1292242-1293120	7	-	1292242	1292242	16724991	2	165,170,	0,708,
#Deleted in new
chr6_GL000256v2_alt	1298816	1360065	chr6_GL000256v2_alt:1298816-1360065	0	-	1298816	1298816	8553170	4	1722,95,76,403,	0,20674,58220,60846,
#Deleted in new
chr6_GL000256v2_alt	1298816	1360066	chr6_GL000256v2_alt:1298816-1360066	0	-	1298816	1298816	8553170	12	1722,202,174,119,43,279,106,95,203,68,76,183,	0,2157,6213,6514,7622,7883,8716,20674,34987,35995,58220,61067,
#Deleted in new
chr6_GL000256v2_alt	1298816	1359850	chr6_GL000256v2_alt:1298816-1359850	0	-	1298816	1298816	8553170	3	1722,76,188,	0,58220,60846,
#Deleted in new
chr6_GL000256v2_alt	1298816	1360106	chr6_GL000256v2_alt:1298816-1360106	0	-	1298816	1298816	789624	7	1722,203,68,627,76,255,106,	0,34987,35995,57196,58220,60846,61184,
#Deleted in new
chr6_GL000256v2_alt	1303927	1304923	chr6_GL000256v2_alt:1303927-1304923	7	-	1303927	1303927	16724991	1	996,	0,
#Deleted in new
chr6_GL000256v2_alt	1304389	1307763	chr6_GL000256v2_alt:1304389-1307763	7	+	1304389	1304389	16724991	6	87,270,274,140,48,422,	0,217,1606,2455,2737,2952,
#Deleted in new
chr6_GL000256v2_alt	1304393	1307763	chr6_GL000256v2_alt:1304393-1307763	5	+	1304393	1304393	16724991	6	83,270,274,117,140,422,	0,213,1602,1998,2451,2948,
#Deleted in new
chr6_GL000256v2_alt	1304402	1307763	chr6_GL000256v2_alt:1304402-1307763	5	+	1304402	1304402	16724991	5	74,274,140,48,422,	0,1593,2442,2724,2939,
#Deleted in new
chr6_GL000256v2_alt	1304412	1307346	chr6_GL000256v2_alt:1304412-1307346	5	+	1304412	1304412	16724991	8	64,270,276,274,117,33,48,5,	0,194,712,1583,1979,2539,2714,2929,
#Deleted in new
chr6_GL000256v2_alt	1309905	1333911	chr6_GL000256v2_alt:1309905-1333911	3	-	1309905	1309905	8553170	2	9680,108,	0,23898,
#Deleted in new
chr6_GL000256v2_alt	1317592	1360562	chr6_GL000256v2_alt:1317592-1360562	0	-	1317592	1317592	8553170	6	156,95,203,68,76,900,	0,1898,16211,17219,39444,42070,
#Deleted in new
chr6_GL000256v2_alt	1330608	1331899	chr6_GL000256v2_alt:1330608-1331899	7	+	1330608	1330608	16724991	2	436,548,	0,743,
#Deleted in new
chr6_GL000256v2_alt	1333830	1357669	chr6_GL000256v2_alt:1333830-1357669	0	-	1333830	1333830	8553170	4	176,68,76,380,	0,981,23206,23459,
#Deleted in new
chr6_GL000256v2_alt	1334325	1360111	chr6_GL000256v2_alt:1334325-1360111	0	-	1334325	1334325	8553170	4	554,627,76,449,	0,21687,22711,25337,
#Deleted in new
chr6_GL000256v2_alt	1334811	1334879	chr6_GL000256v2_alt:1334811-1334879	3	+	1334811	1334811	8553170	1	68,	0,
#Deleted in new
chr6_GL000256v2_alt	1353522	1360101	chr6_GL000256v2_alt:1353522-1360101	0	-	1353522	1353522	8553170	3	3117,76,101,	0,3514,6478,
#Deleted in new
chr6_GL000256v2_alt	1355674	1359901	chr6_GL000256v2_alt:1355674-1359901	0	-	1355674	1355674	8553170	3	965,76,2612,	0,1362,1615,
#Deleted in new
chr6_GL000256v2_alt	1357036	1357112	chr6_GL000256v2_alt:1357036-1357112	3	+	1357036	1357036	8553170	1	76,	0,
#Deleted in new
chr6_GL000256v2_alt	1357820	1363828	chr6_GL000256v2_alt:1357820-1363828	0	+	1357820	1357820	8553170	2	3435,237,	0,5771,
#Deleted in new
chr6_GL000256v2_alt	1360001	1360105	chr6_GL000256v2_alt:1360001-1360105	3	+	1360001	1360001	8553170	1	104,	0,
#Deleted in new
chr6_GL000256v2_alt	1360175	1363828	chr6_GL000256v2_alt:1360175-1363828	3	+	1360446	1363616	789624	4	416,101,110,237,	0,663,970,3416,
#Deleted in new
chr6_GL000256v2_alt	1360178	1363828	chr6_GL000256v2_alt:1360178-1363828	1	+	1360446	1363616	789624	5	133,155,101,110,237,	0,258,660,967,3413,
#Deleted in new
chr6_GL000256v2_alt	1360180	1363828	chr6_GL000256v2_alt:1360180-1363828	1	+	1360446	1363616	789624	5	140,155,101,110,237,	0,256,658,965,3411,
#Deleted in new
chr6_GL000256v2_alt	1360184	1363828	chr6_GL000256v2_alt:1360184-1363828	1	+	1360446	1363616	789624	5	151,155,101,110,237,	0,252,654,961,3407,
#Deleted in new
chr6_GL000256v2_alt	1360251	1363828	chr6_GL000256v2_alt:1360251-1363828	0	+	1360251	1360251	789624	4	69,155,110,237,	0,185,894,3340,
#Deleted in new
chr6_GL000256v2_alt	1365627	1369252	chr6_GL000256v2_alt:1365627-1369252	3	+	1367595	1368225	789624	3	301,109,1230,	0,1881,2395,
#Deleted in new
chr6_GL000256v2_alt	1366123	1369252	chr6_GL000256v2_alt:1366123-1369252	1	+	1367595	1368225	789624	4	275,75,109,1230,	0,1074,1385,1899,
#Deleted in new
chr6_GL000256v2_alt	1366130	1369252	chr6_GL000256v2_alt:1366130-1369252	1	+	1366329	1368225	789624	3	268,109,1230,	0,1378,1892,
#Deleted in new
chr6_GL000256v2_alt	1366461	1369252	chr6_GL000256v2_alt:1366461-1369252	1	+	1367595	1368225	789624	4	122,75,109,1230,	0,736,1047,1561,
#Deleted in new
chr6_GL000256v2_alt	1366494	1369252	chr6_GL000256v2_alt:1366494-1369252	1	+	1367595	1368225	789624	4	50,75,109,1230,	0,703,1014,1528,
#Deleted in new
chr6_GL000256v2_alt	1367124	1369252	chr6_GL000256v2_alt:1367124-1369252	1	+	1367595	1368225	789624	2	493,1230,	0,898,
#Deleted in new
chr6_GL000256v2_alt	1369184	1374806	chr6_GL000256v2_alt:1369184-1374806	3	-	1370029	1374708	789624	4	1426,92,23,665,	0,2891,3190,4957,
#Deleted in new
chr6_GL000256v2_alt	1369184	1374768	chr6_GL000256v2_alt:1369184-1374768	1	-	1370029	1374708	789624	5	935,293,92,23,627,	0,1133,2891,3190,4957,
#Deleted in new
chr6_GL000256v2_alt	1401828	1412029	chr6_GL000256v2_alt:1401828-1412029	3	-	1402467	1411728	0	9	893,66,75,116,23,231,96,500,43,	0,1205,2268,5153,6119,7543,8742,9483,10158,
#Deleted in new
chr6_GL000256v2_alt	1401828	1411811	chr6_GL000256v2_alt:1401828-1411811	0	-	1401828	1401828	789624	7	893,66,75,72,231,96,500,	0,1205,2268,5153,7543,8742,9483,
#Deleted in new
chr6_GL000256v2_alt	1401828	1404586	chr6_GL000256v2_alt:1401828-1404586	0	-	1401828	1401828	8553170	4	349,318,66,490,	0,575,1205,2268,
#Deleted in new
chr6_GL000256v2_alt	1402293	1409445	chr6_GL000256v2_alt:1402293-1409445	0	-	1402293	1402293	8553170	6	428,66,75,72,23,74,	0,740,1803,4688,5654,7078,
#Deleted in new
chr6_GL000256v2_alt	1402804	1407128	chr6_GL000256v2_alt:1402804-1407128	0	-	1402804	1402804	8553170	3	295,75,147,	0,1292,4177,
#Deleted in new
chr6_GL000256v2_alt	1402862	1404369	chr6_GL000256v2_alt:1402862-1404369	0	-	1402862	1402862	8553170	2	237,273,	0,1234,
#Deleted in new
chr6_GL000256v2_alt	1404124	1411109	chr6_GL000256v2_alt:1404124-1411109	0	-	1404124	1404124	8553170	6	47,116,23,231,96,107,	0,2857,3823,5247,6446,6878,
#Deleted in new
chr6_GL000256v2_alt	1404168	1413646	chr6_GL000256v2_alt:1404168-1413646	3	+	1404168	1404168	789624	4	148,125,122,153,	0,2423,6472,9325,
#Deleted in new
chr6_GL000256v2_alt	1407667	1410629	chr6_GL000256v2_alt:1407667-1410629	0	-	1407667	1407667	8553170	3	303,231,59,	0,1704,2903,
#Deleted in new
chr6_GL000256v2_alt	1410140	1411398	chr6_GL000256v2_alt:1410140-1411398	0	-	1410140	1410140	8553170	2	526,87,	0,1171,
#Deleted in new
chr6_GL000256v2_alt	1431743	1431906	chr6_GL000256v2_alt:1431743-1431906	3	-	1431743	1431743	8553170	1	163,	0,
#Deleted in new
chr6_GL000256v2_alt	1435046	1447667	chr6_GL000256v2_alt:1435046-1447667	3	+	1435975	1446744	789624	6	82,649,96,225,23,1011,	0,625,9879,10870,11405,11610,
#Deleted in new
chr6_GL000256v2_alt	1435062	1436137	chr6_GL000256v2_alt:1435062-1436137	0	+	1435062	1435062	8553170	2	475,466,	0,609,
#Deleted in new
chr6_GL000256v2_alt	1435669	1447667	chr6_GL000256v2_alt:1435669-1447667	1	+	1435975	1446744	789624	5	651,96,225,23,1011,	0,9256,10247,10782,10987,
#Deleted in new
chr6_GL000256v2_alt	1435948	1447667	chr6_GL000256v2_alt:1435948-1447667	1	+	1435975	1446744	789624	5	372,96,138,23,1011,	0,8977,10055,10503,10708,
#Deleted in new
chr6_GL000256v2_alt	1450869	1459861	chr6_GL000256v2_alt:1450869-1459861	1	-	1452615	1459785	789624	8	1830,176,33,116,23,231,96,505,	0,2369,3785,4997,5427,6456,7207,8487,
#Deleted in new
chr6_GL000256v2_alt	1450869	1459861	chr6_GL000256v2_alt:1450869-1459861	3	-	1452896	1459785	789624	7	2545,33,116,23,231,96,505,	0,3785,4997,5427,6456,7207,8487,
#Deleted in new
chr6_GL000256v2_alt	1462136	1471620	chr6_GL000256v2_alt:1462136-1471620	3	+	1462822	1471280	789624	8	860,96,231,9,14,116,33,858,	0,3970,5094,6035,6633,7295,7770,8626,
#Deleted in new
chr6_GL000256v2_alt	1462146	1471627	chr6_GL000256v2_alt:1462146-1471627	1	+	1462615	1471280	789624	7	850,96,231,23,116,33,865,	0,3960,5084,6025,7285,7760,8616,
#Deleted in new
chr6_GL000256v2_alt	1462615	1471616	chr6_GL000256v2_alt:1462615-1471616	1	+	1462615	1471538	789624	2	306,120,	0,8881,
#Deleted in new
chr6_GL000256v2_alt	1467243	1470886	chr6_GL000256v2_alt:1467243-1470886	0	+	1467243	1470886	789624	5	218,23,116,33,101,	0,928,2188,2663,3542,
#Deleted in new
chr6_GL000256v2_alt	1467287	1471627	chr6_GL000256v2_alt:1467287-1471627	0	+	1467287	1467287	8553170	6	174,23,116,33,65,124,	0,884,2144,2619,3475,4216,
#Deleted in new
chr6_GL000256v2_alt	1469243	1470028	chr6_GL000256v2_alt:1469243-1470028	0	+	1469243	1469243	8553170	2	304,122,	0,663,
#Deleted in new
chr6_GL000256v2_alt	1483341	1503651	chr6_GL000256v2_alt:1483341-1503651	1	-	1484762	1497988	789624	9	2104,33,116,23,231,96,488,49,110,	0,4707,4958,5554,12059,13972,14209,16578,20200,
#Deleted in new
chr6_GL000256v2_alt	1483341	1512318	chr6_GL000256v2_alt:1483341-1512318	1	-	1484762	1497988	789624	9	2104,33,116,23,231,96,488,104,123,	0,4707,4958,5554,12059,13972,14209,16578,28854,
#Deleted in new
chr6_GL000256v2_alt	1483341	1512257	chr6_GL000256v2_alt:1483341-1512257	1	-	1484762	1497988	789624	10	2104,33,116,23,231,96,599,104,110,62,	0,4707,4958,5554,12059,13972,14209,16578,20200,28854,
#Deleted in new
chr6_GL000256v2_alt	1483341	1489277	chr6_GL000256v2_alt:1483341-1489277	0	-	1483341	1483341	8553170	3	2104,33,978,	0,4707,4958,
#Deleted in new
chr6_GL000256v2_alt	1485686	1487496	chr6_GL000256v2_alt:1485686-1487496	7	-	1485686	1485686	16724991	2	840,363,	0,1447,
#Deleted in new
chr6_GL000256v2_alt	1495420	1512310	chr6_GL000256v2_alt:1495420-1512310	2	-	1495420	1497988	789624	6	211,96,488,104,110,115,	0,1893,2130,4499,8121,16775,
#Deleted in new
chr6_GL000256v2_alt	1495463	1503607	chr6_GL000256v2_alt:1495463-1503607	0	-	1495463	1497988	789624	5	168,96,263,89,66,	0,1850,2312,4456,8078,
#Deleted in new
chr6_GL000256v2_alt	1497375	1512276	chr6_GL000256v2_alt:1497375-1512276	0	-	1497375	1497988	789624	3	34,488,81,	0,175,14820,
#Deleted in new
chr6_GL000256v2_alt	1497622	1512257	chr6_GL000256v2_alt:1497622-1512257	0	-	1497622	1497988	789624	3	410,110,62,	0,5919,14573,
#Deleted in new
chr6_GL000256v2_alt	1497648	1512256	chr6_GL000256v2_alt:1497648-1512256	0	-	1497648	1497648	8553170	4	227,104,110,61,	0,2271,5893,14547,
#Deleted in new
chr6_GL000256v2_alt	1532922	1533361	chr6_GL000256v2_alt:1532922-1533361	0	-	1532922	1532922	8553170	2	230,120,	0,319,
#Deleted in new
chr6_GL000256v2_alt	1532922	1624588	chr6_GL000256v2_alt:1532922-1624588	3	-	1532922	1532922	789624	5	230,93,165,118,126,	0,319,7692,19902,91540,
#Deleted in new
chr6_GL000256v2_alt	1537184	1540747	chr6_GL000256v2_alt:1537184-1540747	7	+	1537184	1537184	16724991	3	405,96,252,	0,2959,3311,
#Deleted in new
chr6_GL000256v2_alt	1558076	1565431	chr6_GL000256v2_alt:1558076-1565431	7	+	1558076	1558076	16724991	7	101,158,211,276,117,48,3676,	0,330,800,1607,1990,2698,3679,
#Deleted in new
chr6_GL000256v2_alt	1558094	1560815	chr6_GL000256v2_alt:1558094-1560815	5	+	1558094	1558094	16724991	6	83,270,280,276,117,41,	0,200,713,1589,1972,2680,
#Deleted in new
chr6_GL000256v2_alt	1589263	1624841	chr6_GL000256v2_alt:1589263-1624841	0	-	1589263	1589263	8553170	4	1806,494,106,34,	0,3677,5339,35544,
#Deleted in new
chr6_GL000256v2_alt	1589475	1625604	chr6_GL000256v2_alt:1589475-1625604	3	-	1589475	1589475	789624	3	3959,106,797,	0,5127,35332,
#Deleted in new
chr6_GL000256v2_alt	1589475	1625351	chr6_GL000256v2_alt:1589475-1625351	0	-	1589475	1589475	8553170	4	3959,106,214,38,	0,5127,23248,35838,
#Deleted in new
chr6_GL000256v2_alt	1589475	1624830	chr6_GL000256v2_alt:1589475-1624830	0	-	1589475	1589475	8553170	3	3959,106,368,	0,5127,34987,
#Deleted in new
chr6_GL000256v2_alt	1589475	1625305	chr6_GL000256v2_alt:1589475-1625305	0	-	1589475	1589475	789624	5	1594,494,106,214,498,	0,3465,5127,23248,35332,
#Deleted in new
chr6_GL000256v2_alt	1589475	1624840	chr6_GL000256v2_alt:1589475-1624840	0	-	1589475	1589475	8553170	4	1594,494,106,236,	0,3465,5127,35129,
#Deleted in new
chr6_GL000256v2_alt	1589475	1624801	chr6_GL000256v2_alt:1589475-1624801	0	-	1589475	1589475	8553170	3	3959,106,197,	0,5127,35129,
#Deleted in new
chr6_GL000256v2_alt	1589475	1624788	chr6_GL000256v2_alt:1589475-1624788	0	-	1589475	1589475	8553170	4	3959,106,214,326,	0,5127,23248,34987,
#Deleted in new
chr6_GL000256v2_alt	1624932	1628206	chr6_GL000256v2_alt:1624932-1628206	0	+	1627772	1628206	789624	3	409,153,441,	0,2411,2833,
#Deleted in new
chr6_GL000256v2_alt	1625288	1627994	chr6_GL000256v2_alt:1625288-1627994	0	+	1627772	1627994	789624	4	161,45,153,229,	0,817,2055,2477,
#Deleted in new
chr6_GL000256v2_alt	1625297	1642186	chr6_GL000256v2_alt:1625297-1642186	1	+	1627772	1640716	0	8	152,153,460,96,231,23,116,2018,	0,2046,2468,3938,8904,13067,13664,14871,
#Deleted in new
chr6_GL000256v2_alt	1625297	1642185	chr6_GL000256v2_alt:1625297-1642185	1	+	1627772	1640716	0	9	152,153,460,96,231,23,90,116,2017,	0,2046,2468,3938,8904,13067,13431,13664,14871,
#Deleted in new
chr6_GL000256v2_alt	1625358	1634434	chr6_GL000256v2_alt:1625358-1634434	0	+	1627772	1634434	789624	5	91,133,460,96,233,	0,2005,2407,3877,8843,
#Deleted in new
chr6_GL000256v2_alt	1625373	1642186	chr6_GL000256v2_alt:1625373-1642186	1	+	1627772	1640716	0	9	76,45,133,460,96,231,23,116,2018,	0,732,1990,2392,3862,8828,12991,13588,14795,
#Deleted in new
chr6_GL000256v2_alt	1625410	1627950	chr6_GL000256v2_alt:1625410-1627950	2	+	1627772	1627950	789624	4	39,50,153,185,	0,690,1933,2355,
#Deleted in new
chr6_GL000256v2_alt	1625712	1642186	chr6_GL000256v2_alt:1625712-1642186	1	+	1627772	1640716	0	8	438,153,460,96,231,23,116,2018,	0,1631,2053,3523,8489,12652,13249,14456,
#Deleted in new
chr6_GL000256v2_alt	1625976	1627917	chr6_GL000256v2_alt:1625976-1627917	0	+	1627772	1627917	789624	3	174,133,152,	0,1387,1789,
#Deleted in new
chr6_GL000256v2_alt	1627343	1642186	chr6_GL000256v2_alt:1627343-1642186	1	+	1627772	1640716	0	8	153,460,96,231,23,90,116,2018,	0,422,1892,6858,11021,11385,11618,12825,
#Deleted in new
chr6_GL000256v2_alt	1627765	1645315	chr6_GL000256v2_alt:1627765-1645315	3	+	1627772	1645267	789624	10	460,96,231,23,116,185,101,83,126,146,	0,1470,6436,10599,11196,12403,15989,16182,17123,17404,
#Deleted in new
chr6_GL000256v2_alt	1627983	1639927	chr6_GL000256v2_alt:1627983-1639927	0	+	1627983	1639902	789624	6	242,96,231,23,34,82,	0,1252,6218,10381,10978,11862,
#Deleted in new
chr6_GL000256v2_alt	1643587	1645314	chr6_GL000256v2_alt:1643587-1645314	1	+	1643628	1645267	789624	5	98,101,107,126,145,	0,167,336,1301,1582,
#Deleted in new
chr6_GL000256v2_alt	1643590	1644950	chr6_GL000256v2_alt:1643590-1644950	0	+	1643590	1643590	8553170	4	95,101,439,62,	0,164,357,1298,
#Deleted in new
chr6_GL000256v2_alt	1643598	1645314	chr6_GL000256v2_alt:1643598-1645314	0	+	1643598	1643598	8553170	3	87,1260,145,	0,156,1571,
#Deleted in new
chr6_GL000256v2_alt	1643607	1645314	chr6_GL000256v2_alt:1643607-1645314	0	+	1643607	1643607	8553170	4	78,101,126,145,	0,147,1281,1562,
#Deleted in new
chr6_GL000256v2_alt	1643609	1645341	chr6_GL000256v2_alt:1643609-1645341	0	+	1643609	1643609	8553170	4	76,83,126,172,	0,338,1279,1560,
#Deleted in new
chr6_GL000256v2_alt	1643611	1645314	chr6_GL000256v2_alt:1643611-1645314	0	+	1643611	1643611	8553170	4	74,276,126,145,	0,143,1277,1558,
#Deleted in new
chr6_GL000256v2_alt	1643615	1645314	chr6_GL000256v2_alt:1643615-1645314	1	+	1643628	1645267	789624	5	70,101,83,126,145,	0,139,332,1273,1554,
#Deleted in new
chr6_GL000256v2_alt	1643615	1645314	chr6_GL000256v2_alt:1643615-1645314	1	+	1643628	1645267	789624	4	240,83,126,145,	0,332,1273,1554,
#Deleted in new
chr6_GL000256v2_alt	1643625	1645314	chr6_GL000256v2_alt:1643625-1645314	1	+	1643628	1645230	789624	5	60,101,83,133,145,	0,129,322,1263,1544,
#Deleted in new
chr6_GL000256v2_alt	1649872	1650007	chr6_GL000256v2_alt:1649872-1650007	7	+	1649872	1649872	16724991	1	135,	0,
#Deleted in new
chr6_GL000256v2_alt	1657734	1658368	chr6_GL000256v2_alt:1657734-1658368	7	-	1657734	1657734	16724991	1	634,	0,
#Deleted in new
chr6_GL000256v2_alt	1661556	1662725	chr6_GL000256v2_alt:1661556-1662725	7	-	1661556	1661556	16724991	1	1169,	0,
#Deleted in new
chr6_GL000256v2_alt	1713160	1717766	chr6_GL000256v2_alt:1713160-1717766	7	+	1713160	1713160	16724991	5	251,286,271,131,116,	0,517,1404,1791,4490,
#Deleted in new
chr6_GL000256v2_alt	1764891	1766429	chr6_GL000256v2_alt:1764891-1766429	7	+	1764891	1764891	16724991	2	414,853,	0,685,
#Deleted in new
chr6_GL000256v2_alt	1767238	1768608	chr6_GL000256v2_alt:1767238-1768608	7	+	1767238	1767238	16724991	1	1370,	0,
#Deleted in new
chr6_GL000256v2_alt	1786711	1787362	chr6_GL000256v2_alt:1786711-1787362	7	+	1786711	1786711	16724991	1	651,	0,
#Deleted in new
chr6_GL000256v2_alt	1790235	1794974	chr6_GL000256v2_alt:1790235-1794974	3	+	1790300	1793350	0	8	129,270,276,276,117,33,43,1457,	0,259,773,1670,2070,2937,3074,3282,
#Deleted in new
chr6_GL000256v2_alt	1790278	1791134	chr6_GL000256v2_alt:1790278-1791134	0	+	1790278	1790278	8553170	2	86,640,	0,216,
#Deleted in new
chr6_GL000256v2_alt	1790280	1792052	chr6_GL000256v2_alt:1790280-1792052	0	+	1790280	1790280	8553170	3	484,276,147,	0,728,1625,
#Deleted in new
chr6_GL000256v2_alt	1817022	1819977	chr6_GL000256v2_alt:1817022-1819977	3	+	1817022	1817022	8553170	2	346,505,	0,2450,
#Deleted in new
chr6_GL000256v2_alt	1842132	1857929	chr6_GL000256v2_alt:1842132-1857929	3	-	1846827	1856958	789624	12	4937,141,163,179,195,96,208,72,152,137,166,1044,	0,5319,5735,5975,11091,11708,11972,13197,13386,13677,14177,14753,
#Deleted in new
chr6_GL000256v2_alt	1847240	1853303	chr6_GL000256v2_alt:1847240-1853303	0	-	1847240	1847240	8553170	4	352,163,179,80,	0,627,867,5983,
#Deleted in new
chr6_GL000256v2_alt	1847951	1848573	chr6_GL000256v2_alt:1847951-1848573	0	-	1847951	1847951	8553170	2	79,466,	0,156,
#Deleted in new
chr6_GL000256v2_alt	1852933	1853877	chr6_GL000256v2_alt:1852933-1853877	0	-	1852933	1852933	8553170	2	485,37,	0,907,
#Deleted in new
chr6_GL000256v2_alt	1854114	1856843	chr6_GL000256v2_alt:1854114-1856843	0	-	1854114	1856542	789624	5	198,72,152,137,534,	0,1215,1404,1695,2195,
#Deleted in new
chr6_GL000256v2_alt	1857640	1864478	chr6_GL000256v2_alt:1857640-1864478	3	+	1858099	1863250	789624	4	565,63,291,1335,	0,1264,4948,5503,
#Deleted in new
chr6_GL000256v2_alt	1858034	1864478	chr6_GL000256v2_alt:1858034-1864478	1	+	1858099	1863250	789624	3	171,291,1335,	0,4554,5109,
#Deleted in new
chr6_GL000256v2_alt	1858068	1864478	chr6_GL000256v2_alt:1858068-1864478	0	+	1858068	1858068	8553170	4	137,181,291,1335,	0,4014,4520,5075,
#Deleted in new
chr6_GL000256v2_alt	1858070	1864478	chr6_GL000256v2_alt:1858070-1864478	0	+	1858070	1858070	8553170	5	135,63,181,291,1335,	0,834,4012,4518,5073,
#Deleted in new
chr6_GL000256v2_alt	1858101	1859191	chr6_GL000256v2_alt:1858101-1859191	0	+	1858101	1858101	8553170	2	104,287,	0,803,
#Deleted in new
chr6_GL000256v2_alt	1860785	1864478	chr6_GL000256v2_alt:1860785-1864478	0	+	1860785	1860785	8553170	2	2094,1335,	0,2358,
#Deleted in new
chr6_GL000256v2_alt	1872132	1892187	chr6_GL000256v2_alt:1872132-1892187	3	+	1872244	1891456	789624	25	185,47,96,127,38,108,75,114,114,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,898,	0,6036,6445,6703,6975,7097,8559,9033,11022,11694,12236,12433,12820,13046,13888,14186,14507,14762,15102,15269,18310,18428,18771,18928,19157,
#Deleted in new
chr6_GL000256v2_alt	1872149	1892187	chr6_GL000256v2_alt:1872149-1892187	1	+	1872244	1891456	789624	24	168,47,96,127,38,108,75,114,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,898,	0,6019,6428,6686,6958,7080,8542,9016,11677,12219,12416,12803,13029,13871,14169,14490,14745,15085,15252,18293,18411,18754,18911,19140,
#Deleted in new
chr6_GL000256v2_alt	1872189	1884469	chr6_GL000256v2_alt:1872189-1884469	0	+	1872244	1884469	789624	11	128,47,96,130,38,108,75,114,114,123,101,	0,5979,6388,6643,6918,7040,8502,8976,10965,11637,12179,
#Deleted in new
chr6_GL000256v2_alt	1872198	1881208	chr6_GL000256v2_alt:1872198-1881208	0	+	1872198	1872198	8553170	7	119,96,127,38,108,75,43,	0,6379,6637,6909,7031,8493,8967,
#Deleted in new
chr6_GL000256v2_alt	1872208	1892187	chr6_GL000256v2_alt:1872208-1892187	1	+	1872244	1891456	789624	8	109,47,96,99,97,65,73,898,	0,5960,6369,6627,18424,18695,18852,19081,
#Deleted in new
chr6_GL000256v2_alt	1883225	1897937	chr6_GL000256v2_alt:1883225-1897937	0	+	1883225	1883225	8553170	18	43,123,101,86,140,149,84,125,113,172,75,71,33,169,65,73,628,611,	0,601,1143,1340,1727,1953,2795,3093,3414,3669,4009,4176,7217,7335,7678,7835,8064,14101,
#Deleted in new
chr6_GL000256v2_alt	1890183	1891499	chr6_GL000256v2_alt:1890183-1891499	0	+	1890183	1890183	8553170	4	546,65,73,210,	0,720,877,1106,
#Deleted in new
chr6_GL000256v2_alt	1901157	1918002	chr6_GL000256v2_alt:1901157-1918002	3	-	1902306	1910702	789624	20	1259,756,114,76,195,64,247,159,148,101,113,106,174,78,52,136,87,118,521,21,	0,1536,2446,2810,3072,3380,3608,3953,4188,4594,5523,5738,6068,6379,7440,8379,8677,9438,16078,16824,
#Deleted in new
chr6_GL000256v2_alt	1904330	1904970	chr6_GL000256v2_alt:1904330-1904970	0	-	1904330	1904330	8553170	2	271,205,	0,435,
#Deleted in new
chr6_GL000256v2_alt	1905369	1906756	chr6_GL000256v2_alt:1905369-1906756	0	-	1905369	1905369	8553170	2	483,76,	0,1311,
#Deleted in new
chr6_GL000256v2_alt	1905775	1907495	chr6_GL000256v2_alt:1905775-1907495	0	-	1905775	1905775	8553170	4	77,113,106,270,	0,905,1120,1450,
#Deleted in new
chr6_GL000256v2_alt	1906566	1907001	chr6_GL000256v2_alt:1906566-1907001	0	-	1906566	1906566	8553170	2	227,106,	0,329,
#Deleted in new
chr6_GL000256v2_alt	1910704	1918002	chr6_GL000256v2_alt:1910704-1918002	0	-	1910704	1910704	8553170	4	9,54,521,21,	0,4602,6531,7277,
#Deleted in new
chr6_GL000256v2_alt	1917341	1919370	chr6_GL000256v2_alt:1917341-1919370	0	-	1917341	1917341	8553170	2	415,55,	0,1974,
#Deleted in new
chr6_GL000256v2_alt	1918466	1927153	chr6_GL000256v2_alt:1918466-1927153	3	+	1918623	1926555	0	7	235,109,98,69,67,60,894,	0,1784,2000,2212,5123,7174,7793,
#Deleted in new
chr6_GL000256v2_alt	1918600	1920882	chr6_GL000256v2_alt:1918600-1920882	0	+	1918600	1918600	8553170	4	101,109,98,204,	0,1650,1866,2078,
#Deleted in new
chr6_GL000256v2_alt	1918609	1927153	chr6_GL000256v2_alt:1918609-1927153	0	+	1918609	1918609	8553170	5	92,497,67,60,894,	0,1641,4980,7031,7650,
#Deleted in new
chr6_GL000256v2_alt	1918617	1927153	chr6_GL000256v2_alt:1918617-1927153	1	+	1918623	1926555	789624	5	84,109,98,67,894,	0,1633,1849,4972,7642,
#Deleted in new
chr6_GL000256v2_alt	1918617	1927153	chr6_GL000256v2_alt:1918617-1927153	0	+	1918617	1918617	8553170	7	84,109,126,69,67,60,894,	0,1633,1821,2061,4972,7023,7642,
#Deleted in new
chr6_GL000256v2_alt	1927599	1945438	chr6_GL000256v2_alt:1927599-1945438	1	+	1927643	1943774	0	9	151,61,92,61,114,102,46,72,1912,	0,618,794,1009,1190,1487,13536,15335,15927,
#Deleted in new
chr6_GL000256v2_alt	1927613	1947582	chr6_GL000256v2_alt:1927613-1947582	1	+	1927643	1947402	0	13	137,61,92,61,114,102,46,69,72,244,80,43,355,	0,604,780,995,1176,1473,13522,13680,15321,15913,19040,19212,19614,
#Deleted in new
chr6_GL000256v2_alt	1927632	1945438	chr6_GL000256v2_alt:1927632-1945438	1	+	1927643	1944321	0	10	118,61,92,61,114,102,46,72,244,1151,	0,585,761,976,1157,1454,13503,15302,15894,16655,
#Deleted in new
chr6_GL000256v2_alt	1927633	1945438	chr6_GL000256v2_alt:1927633-1945438	1	+	1927643	1943774	0	10	117,61,92,61,114,102,46,69,72,1912,	0,584,760,975,1156,1453,13502,13660,15301,15893,
#Deleted in new
chr6_GL000256v2_alt	1927643	1945438	chr6_GL000256v2_alt:1927643-1945438	1	+	1927643	1944321	0	11	107,61,92,61,114,102,46,69,72,244,1151,	0,574,750,965,1146,1443,13492,13650,15291,15883,16644,
#Deleted in new
chr6_GL000256v2_alt	1927643	1947582	chr6_GL000256v2_alt:1927643-1947582	1	+	1927961	1947402	0	13	389,61,92,61,114,102,46,69,72,244,80,43,355,	0,574,750,965,1146,1443,13492,13650,15291,15883,19010,19182,19584,
#Deleted in new
chr6_GL000256v2_alt	1927650	1947582	chr6_GL000256v2_alt:1927650-1947582	0	+	1927650	1927650	8553170	12	100,61,92,61,114,102,46,69,72,80,43,355,	0,567,743,958,1139,1436,13485,13643,15284,19003,19175,19577,
#Deleted in new
chr6_GL000256v2_alt	1927672	1941457	chr6_GL000256v2_alt:1927672-1941457	2	+	1927672	1927672	8553170	8	78,61,92,61,114,102,46,164,	0,545,721,936,1117,1414,13463,13621,
#Deleted in new
chr6_GL000256v2_alt	1927677	1947582	chr6_GL000256v2_alt:1927677-1947582	0	+	1927677	1927677	789624	11	73,61,92,61,114,102,46,69,72,80,757,	0,540,716,931,1112,1409,13458,13616,15257,18976,19148,
#Deleted in new
chr6_GL000256v2_alt	1929157	1947161	chr6_GL000256v2_alt:1929157-1947161	0	+	1929157	1929157	8553170	6	31,46,72,80,43,128,	0,11978,13777,17496,17668,17876,
#Deleted in new
chr6_GL000256v2_alt	1934390	1934657	chr6_GL000256v2_alt:1934390-1934657	7	+	1934390	1934390	16724991	1	267,	0,
#Deleted in new
chr6_GL000256v2_alt	1942580	1947582	chr6_GL000256v2_alt:1942580-1947582	0	+	1942580	1942580	8553170	4	49,72,215,355,	0,354,4073,4647,
#Deleted in new
chr6_GL000256v2_alt	1943677	1947582	chr6_GL000256v2_alt:1943677-1947582	0	+	1943677	1943677	8553170	3	93,79,757,	0,2977,3148,
#Deleted in new
chr6_GL000256v2_alt	1947797	1952044	chr6_GL000256v2_alt:1947797-1952044	0	+	1947797	1947797	8553170	4	265,209,89,20,	0,2712,3955,4227,
#Deleted in new
chr6_GL000256v2_alt	1947813	1953860	chr6_GL000256v2_alt:1947813-1953860	0	+	1947813	1947813	8553170	6	249,402,107,201,70,308,	0,2503,3939,4211,5585,5739,
#Deleted in new
chr6_GL000256v2_alt	1947831	1953860	chr6_GL000256v2_alt:1947831-1953860	1	+	1947990	1953666	789624	6	231,402,89,201,70,308,	0,2485,3921,4193,5567,5721,
#Deleted in new
chr6_GL000256v2_alt	1947884	1953464	chr6_GL000256v2_alt:1947884-1953464	0	+	1947884	1947884	8553170	3	178,201,66,	0,4140,5514,
#Deleted in new
chr6_GL000256v2_alt	1947922	1953860	chr6_GL000256v2_alt:1947922-1953860	1	+	1947990	1953666	789624	5	140,89,201,70,308,	0,3830,4102,5476,5630,
#Deleted in new
chr6_GL000256v2_alt	1947944	1950672	chr6_GL000256v2_alt:1947944-1950672	0	+	1947944	1947944	8553170	3	118,241,356,	0,420,2372,
#Deleted in new
chr6_GL000256v2_alt	1948179	1953860	chr6_GL000256v2_alt:1948179-1953860	2	+	1948179	1953666	789624	6	426,402,89,201,70,308,	0,2137,3573,3845,5219,5373,
#Deleted in new
chr6_GL000256v2_alt	1951812	1953860	chr6_GL000256v2_alt:1951812-1953860	0	+	1951812	1951812	8553170	3	29,201,462,	0,212,1586,
#Deleted in new
chr6_GL000256v2_alt	1953869	1973820	chr6_GL000256v2_alt:1953869-1973820	3	-	1953992	1973624	789624	20	252,174,162,163,68,119,163,141,153,99,211,116,111,192,204,255,57,163,239,403,	0,1618,2087,2347,3110,3303,3509,3864,6384,6648,6944,9540,9824,11714,11984,12392,17323,17703,17949,19548,
#Deleted in new
chr6_GL000256v2_alt	1953869	1962766	chr6_GL000256v2_alt:1953869-1962766	1	-	1953992	1962639	789624	12	252,174,162,163,68,119,163,141,153,99,211,228,	0,1618,2087,2347,3110,3303,3509,3864,6384,6648,6944,8669,
#Deleted in new
chr6_GL000256v2_alt	1960254	1961360	chr6_GL000256v2_alt:1960254-1961360	0	-	1960254	1960254	8553170	3	152,99,547,	0,263,559,
#Deleted in new
chr6_GL000256v2_alt	1965912	1973771	chr6_GL000256v2_alt:1965912-1973771	0	-	1965912	1973765	789624	6	145,255,57,163,239,33,	0,349,5280,5660,5906,7826,
#Deleted in new
chr6_GL000256v2_alt	1977171	1980172	chr6_GL000256v2_alt:1977171-1980172	1	-	1978051	1980172	789624	2	900,211,	0,2790,
#Deleted in new
chr6_GL000256v2_alt	1977171	1980172	chr6_GL000256v2_alt:1977171-1980172	2	-	1978051	1980172	789624	2	900,211,	0,2790,
#Deleted in new
chr6_GL000256v2_alt	1977171	1980172	chr6_GL000256v2_alt:1977171-1980172	0	-	1977171	1977171	8553170	2	900,211,	0,2790,
#Deleted in new
chr6_GL000256v2_alt	1977171	1980172	chr6_GL000256v2_alt:1977171-1980172	0	-	1977171	1977171	8553170	2	900,211,	0,2790,
#Deleted in new
chr6_GL000256v2_alt	2000592	2018675	chr6_GL000256v2_alt:2000592-2018675	3	-	2001250	2015960	0	15	826,111,126,183,120,2478,71,792,93,60,1481,70,381,139,645,	0,2746,2945,3297,3611,3814,7576,7758,11604,11859,12066,13840,13995,15232,17438,
#Deleted in new
chr6_GL000256v2_alt	2001100	2004867	chr6_GL000256v2_alt:2001100-2004867	0	-	2001100	2001100	8553170	5	318,111,126,183,664,	0,2238,2437,2789,3103,
#Deleted in new
chr6_GL000256v2_alt	2003852	2013969	chr6_GL000256v2_alt:2003852-2013969	3	+	2003852	2003852	789624	3	127,114,497,	0,9244,9620,
#Deleted in new
chr6_GL000256v2_alt	2006233	2012699	chr6_GL000256v2_alt:2006233-2012699	0	-	2006233	2012699	789624	5	651,71,93,60,41,	0,1935,5963,6218,6425,
#Deleted in new
chr6_GL000256v2_alt	2006367	2008470	chr6_GL000256v2_alt:2006367-2008470	0	-	2006367	2006367	8553170	2	517,302,	0,1801,
#Deleted in new
chr6_GL000256v2_alt	2012256	2012716	chr6_GL000256v2_alt:2012256-2012716	0	-	2012256	2012256	8553170	3	30,60,58,	0,195,402,
#Deleted in new
chr6_GL000256v2_alt	2013992	2017861	chr6_GL000256v2_alt:2013992-2017861	1	-	2014489	2015960	789624	7	147,70,20,107,153,139,194,	0,440,595,618,823,1832,3675,
#Deleted in new
chr6_GL000256v2_alt	2014617	2017961	chr6_GL000256v2_alt:2014617-2017961	0	-	2014617	2015960	789624	3	351,139,92,	0,1207,3252,
#Deleted in new
chr6_GL000256v2_alt	2014724	2018233	chr6_GL000256v2_alt:2014724-2018233	0	-	2014724	2015960	789624	3	244,139,199,	0,1100,3310,
#Deleted in new
chr6_GL000256v2_alt	2014764	2017907	chr6_GL000256v2_alt:2014764-2017907	0	-	2014764	2015960	789624	3	204,139,240,	0,1060,2903,
#Deleted in new
chr6_GL000256v2_alt	2020986	2026212	chr6_GL000256v2_alt:2020986-2026212	3	+	2021292	2025183	0	4	363,109,111,2087,	0,2336,2717,3139,
#Deleted in new
chr6_GL000256v2_alt	2022359	2026212	chr6_GL000256v2_alt:2022359-2026212	1	+	2023753	2025183	789624	4	325,109,111,2087,	0,963,1344,1766,
#Deleted in new
chr6_GL000256v2_alt	2022452	2026212	chr6_GL000256v2_alt:2022452-2026212	1	+	2023045	2025183	789624	4	596,109,111,2087,	0,870,1251,1673,
#Deleted in new
chr6_GL000256v2_alt	2022484	2026212	chr6_GL000256v2_alt:2022484-2026212	1	+	2023753	2025183	789624	4	516,109,111,2087,	0,838,1219,1641,
#Deleted in new
chr6_GL000256v2_alt	2028494	2043529	chr6_GL000256v2_alt:2028494-2043529	3	-	2028901	2042985	789624	13	437,165,138,46,182,153,96,120,144,91,76,57,207,	0,2313,2719,2973,3210,12458,12796,12979,13491,13915,14093,14448,14828,
#Deleted in new
chr6_GL000256v2_alt	2028494	2041649	chr6_GL000256v2_alt:2028494-2041649	0	-	2028494	2028494	8553170	7	437,165,138,419,153,96,176,	0,2313,2719,2973,12458,12796,12979,
#Deleted in new
chr6_GL000256v2_alt	2031704	2043103	chr6_GL000256v2_alt:2031704-2043103	0	-	2031704	2042963	789624	6	182,153,96,120,144,161,	0,9248,9586,9769,10281,11238,
#Deleted in new
chr6_GL000256v2_alt	2031776	2041589	chr6_GL000256v2_alt:2031776-2041589	0	-	2031776	2031776	8553170	3	110,153,299,	0,9176,9514,
#Deleted in new
chr6_GL000256v2_alt	2031852	2043296	chr6_GL000256v2_alt:2031852-2043296	0	-	2031852	2042985	789624	9	34,153,96,120,144,91,76,57,117,	0,9100,9438,9621,10133,10557,10735,11090,11327,
#Deleted in new
chr6_GL000256v2_alt	2037090	2037201	chr6_GL000256v2_alt:2037090-2037201	3	-	2037090	2037090	8553170	1	111,	0,
#Deleted in new
chr6_GL000256v2_alt	2040952	2043528	chr6_GL000256v2_alt:2040952-2043528	0	-	2040952	2040952	8553170	7	153,96,120,144,76,57,206,	0,338,521,1033,1635,1990,2370,
#Deleted in new
chr6_GL000256v2_alt	2040955	2043153	chr6_GL000256v2_alt:2040955-2043153	0	-	2040955	2043131	789624	3	150,96,211,	0,335,1987,
#Deleted in new
chr6_GL000256v2_alt	2040970	2043072	chr6_GL000256v2_alt:2040970-2043072	0	-	2040970	2042985	789624	7	135,96,120,144,91,76,130,	0,320,503,1015,1439,1617,1972,
#Deleted in new
chr6_GL000256v2_alt	2041048	2043502	chr6_GL000256v2_alt:2041048-2043502	0	-	2041048	2041048	8553170	7	57,96,120,515,76,57,180,	0,242,425,937,1539,1894,2274,
#Deleted in new
chr6_GL000256v2_alt	2041049	2042999	chr6_GL000256v2_alt:2041049-2042999	0	-	2041049	2042985	789624	7	56,96,120,144,43,76,57,	0,241,424,936,1408,1538,1893,
#Deleted in new
chr6_GL000256v2_alt	2041303	2043320	chr6_GL000256v2_alt:2041303-2043320	0	-	2041303	2042985	789624	7	83,120,144,91,76,57,58,	0,170,682,1106,1284,1639,1959,
#Deleted in new
chr6_GL000256v2_alt	2042149	2043473	chr6_GL000256v2_alt:2042149-2043473	0	-	2042149	2042149	8553170	2	850,151,	0,1173,
#Deleted in new
chr6_GL000256v2_alt	2043994	2045350	chr6_GL000256v2_alt:2043994-2045350	1	-	2044731	2045314	789624	2	998,246,	0,1110,
#Deleted in new
chr6_GL000256v2_alt	2043994	2045344	chr6_GL000256v2_alt:2043994-2045344	3	-	2044897	2045314	789624	1	1350,	0,
#Deleted in new
chr6_GL000256v2_alt	2051805	2052057	chr6_GL000256v2_alt:2051805-2052057	3	+	2051805	2051805	8553170	1	252,	0,
#Deleted in new
chr6_GL000256v2_alt	2089442	2093011	chr6_GL000256v2_alt:2089442-2093011	0	+	2089442	2089442	8553170	2	182,825,	0,2744,
#Deleted in new
chr6_GL000256v2_alt	2089442	2093011	chr6_GL000256v2_alt:2089442-2093011	3	+	2089442	2089442	8553170	3	182,68,825,	0,2207,2744,
#Deleted in new
chr6_GL000256v2_alt	2099401	2131367	chr6_GL000256v2_alt:2099401-2131367	0	-	2099401	2099401	8553170	2	121,146,	0,31820,
#Deleted in new
chr6_GL000256v2_alt	2114577	2131367	chr6_GL000256v2_alt:2114577-2131367	3	-	2114577	2114577	8553170	2	947,146,	0,16644,
#Deleted in new
chr6_GL000256v2_alt	2311183	2336137	chr6_GL000256v2_alt:2311183-2336137	3	+	2311183	2311183	8553170	4	303,4599,386,731,	0,15051,21747,24223,
#Deleted in new
chr6_GL000256v2_alt	2330644	2335448	chr6_GL000256v2_alt:2330644-2335448	0	+	2330644	2330644	8553170	3	189,386,42,	0,2286,4762,
#Deleted in new
chr6_GL000256v2_alt	2356909	2363339	chr6_GL000256v2_alt:2356909-2363339	7	+	2356909	2356909	16724991	4	83,417,689,482,	0,651,2764,5948,
#Deleted in new
chr6_GL000256v2_alt	2357667	2363326	chr6_GL000256v2_alt:2357667-2363326	4	+	2357667	2357667	16724991	3	310,1198,469,	0,1497,5190,
#Deleted in new
chr6_GL000256v2_alt	2357790	2360242	chr6_GL000256v2_alt:2357790-2360242	5	+	2357790	2357790	16724991	2	187,569,	0,1883,
#Deleted in new
chr6_GL000256v2_alt	2386499	2386599	chr6_GL000256v2_alt:2386499-2386599	3	+	2386499	2386499	8553170	1	100,	0,
#Deleted in new
chr6_GL000256v2_alt	2461956	2467631	chr6_GL000256v2_alt:2461956-2467631	3	+	2462884	2466132	789624	4	181,811,559,1740,	0,355,2905,3935,
#Deleted in new
chr6_GL000256v2_alt	2461961	2467631	chr6_GL000256v2_alt:2461961-2467631	1	+	2462884	2466132	789624	4	176,565,559,1740,	0,596,2900,3930,
#Deleted in new
chr6_GL000256v2_alt	2464898	2466422	chr6_GL000256v2_alt:2464898-2466422	0	+	2464898	2464898	8553170	3	94,255,531,	0,267,993,
#Deleted in new
chr6_GL000256v2_alt	2467752	2469694	chr6_GL000256v2_alt:2467752-2469694	3	-	2468016	2469593	789624	4	531,159,131,342,	0,793,1236,1600,
#Deleted in new
chr6_GL000256v2_alt	2467752	2474125	chr6_GL000256v2_alt:2467752-2474125	1	-	2468016	2474052	789624	5	531,159,131,121,478,	0,793,1236,1600,5895,
#Deleted in new
chr6_GL000256v2_alt	2467752	2468710	chr6_GL000256v2_alt:2467752-2468710	0	-	2467752	2467752	8553170	2	531,165,	0,793,
#Deleted in new
chr6_GL000256v2_alt	2469117	2474090	chr6_GL000256v2_alt:2469117-2474090	0	-	2469117	2469117	8553170	2	356,443,	0,4530,
#Deleted in new
chr6_GL000256v2_alt	2473349	2474052	chr6_GL000256v2_alt:2473349-2474052	1	-	2473349	2474052	789624	3	15,42,312,	0,345,391,
#Deleted in new
chr6_GL000256v2_alt	2477165	2481332	chr6_GL000256v2_alt:2477165-2481332	3	-	2477165	2477165	789624	3	299,33,261,	0,503,3906,
#Deleted in new
chr6_GL000256v2_alt	2501183	2507388	chr6_GL000256v2_alt:2501183-2507388	3	+	2501183	2501183	789624	2	123,1596,	0,4609,
#Deleted in new
chr6_GL000256v2_alt	2501561	2506643	chr6_GL000256v2_alt:2501561-2506643	0	+	2501561	2501561	8553170	2	44,851,	0,4231,
#Deleted in new
chr6_GL000256v2_alt	2503588	2505340	chr6_GL000256v2_alt:2503588-2505340	3	-	2503588	2503588	8553170	2	474,42,	0,1710,
#Deleted in new
chr6_GL000256v2_alt	2505433	2506422	chr6_GL000256v2_alt:2505433-2506422	0	+	2505433	2505433	8553170	2	41,630,	0,359,
#Deleted in new
chr6_GL000256v2_alt	2570706	2574034	chr6_GL000256v2_alt:2570706-2574034	1	-	2571027	2574019	789624	7	423,48,149,276,276,270,88,	0,587,1185,1455,2318,2840,3240,
#Deleted in new
chr6_GL000256v2_alt	2570706	2574034	chr6_GL000256v2_alt:2570706-2574034	1	-	2571124	2574019	789624	8	423,48,51,120,276,276,270,88,	0,587,742,1214,1455,2318,2840,3240,
#Deleted in new
chr6_GL000256v2_alt	2570706	2574099	chr6_GL000256v2_alt:2570706-2574099	3	-	2571124	2574019	0	8	423,48,33,120,276,276,270,153,	0,587,742,1214,1455,2318,2840,3240,
#Deleted in new
chr6_GL000256v2_alt	2570706	2574038	chr6_GL000256v2_alt:2570706-2574038	1	-	2571027	2574019	789624	6	413,120,276,276,270,92,	0,1214,1455,2318,2840,3240,
#Deleted in new
chr6_GL000256v2_alt	2570706	2573997	chr6_GL000256v2_alt:2570706-2573997	0	-	2570706	2570706	8553170	6	423,48,33,120,276,973,	0,587,742,1214,1455,2318,
#Deleted in new
chr6_GL000256v2_alt	2570706	2574053	chr6_GL000256v2_alt:2570706-2574053	0	-	2573230	2574019	789624	8	423,48,33,120,276,259,270,107,	0,587,742,1214,1455,2318,2840,3240,
#Deleted in new
chr6_GL000256v2_alt	2570706	2572374	chr6_GL000256v2_alt:2570706-2572374	0	-	2570706	2570706	8553170	4	423,48,592,213,	0,587,742,1455,
#Deleted in new
chr6_GL000256v2_alt	2570706	2571622	chr6_GL000256v2_alt:2570706-2571622	0	-	2570706	2570706	8553170	2	423,329,	0,587,
#Deleted in new
chr6_GL000256v2_alt	2571446	2657642	chr6_GL000256v2_alt:2571446-2657642	1	-	2571446	2657642	789624	3	35,117,88,	0,85898,86108,
#Deleted in new
chr6_GL000256v2_alt	2572161	2574021	chr6_GL000256v2_alt:2572161-2574021	0	-	2572596	2574019	789624	5	276,69,276,270,75,	0,422,863,1385,1785,
#Deleted in new
chr6_GL000256v2_alt	2572165	2574017	chr6_GL000256v2_alt:2572165-2574017	0	-	2572165	2574017	789624	5	118,47,276,270,71,	0,225,859,1381,1781,
#Deleted in new
chr6_GL000256v2_alt	2572172	2574078	chr6_GL000256v2_alt:2572172-2574078	0	-	2572172	2572172	8553170	3	265,276,532,	0,852,1374,
#Deleted in new
chr6_GL000256v2_alt	2573050	2574038	chr6_GL000256v2_alt:2573050-2574038	0	-	2573050	2573050	8553170	2	766,92,	0,896,
#Deleted in new
chr6_GL000256v2_alt	2577490	2580663	chr6_GL000256v2_alt:2577490-2580663	7	+	2577490	2577490	16724991	1	3173,	0,
#Deleted in new
chr6_GL000256v2_alt	2582225	2583425	chr6_GL000256v2_alt:2582225-2583425	7	+	2582225	2582225	16724991	1	1200,	0,
#Deleted in new
chr6_GL000256v2_alt	2589701	2591153	chr6_GL000256v2_alt:2589701-2591153	7	-	2589701	2589701	16724991	1	1452,	0,
#Deleted in new
chr6_GL000256v2_alt	2610038	2610773	chr6_GL000256v2_alt:2610038-2610773	7	-	2610038	2610038	16724991	2	233,73,	0,662,
#Deleted in new
chr6_GL000256v2_alt	2656109	2659467	chr6_GL000256v2_alt:2656109-2659467	1	-	2656720	2659396	0	8	425,48,33,117,276,276,270,144,	0,607,761,1235,1445,2296,2815,3214,
#Deleted in new
chr6_GL000256v2_alt	2656109	2658642	chr6_GL000256v2_alt:2656109-2658642	0	-	2656720	2658642	789624	6	425,48,51,117,276,237,	0,607,761,1235,1445,2296,
#Deleted in new
chr6_GL000256v2_alt	2656109	2657314	chr6_GL000256v2_alt:2656109-2657314	0	-	2656109	2656109	8553170	3	425,48,444,	0,607,761,
#Deleted in new
chr6_GL000256v2_alt	2656109	2657044	chr6_GL000256v2_alt:2656109-2657044	0	-	2656109	2656109	8553170	2	425,328,	0,607,
#Deleted in new
chr6_GL000256v2_alt	2656738	2657642	chr6_GL000256v2_alt:2656738-2657642	3	-	2656738	2657642	789624	3	26,33,88,	0,132,816,
#Deleted in new
chr6_GL000256v2_alt	2657359	2658040	chr6_GL000256v2_alt:2657359-2658040	0	-	2657359	2657359	8553170	2	102,486,	0,195,
#Deleted in new
chr6_GL000256v2_alt	2657419	2659398	chr6_GL000256v2_alt:2657419-2659398	0	-	2657988	2659396	789624	6	42,276,69,276,270,75,	0,135,556,986,1505,1904,
#Deleted in new
chr6_GL000256v2_alt	2657628	2659417	chr6_GL000256v2_alt:2657628-2659417	0	-	2657628	2657628	8553170	3	202,789,94,	0,777,1695,
#Deleted in new
chr6_GL000256v2_alt	2657744	2659300	chr6_GL000256v2_alt:2657744-2659300	0	-	2657744	2659300	789624	3	86,276,376,	0,661,1180,
#Deleted in new
chr6_GL000256v2_alt	2668586	2669133	chr6_GL000256v2_alt:2668586-2669133	7	-	2668586	2668586	16724991	1	547,	0,
#Deleted in new
chr6_GL000256v2_alt	2672350	2672457	chr6_GL000256v2_alt:2672350-2672457	3	+	2672350	2672350	8553170	1	107,	0,
#Deleted in new
chr6_GL000256v2_alt	2679636	2680239	chr6_GL000256v2_alt:2679636-2680239	7	+	2679636	2679636	16724991	1	603,	0,
#Deleted in new
chr6_GL000256v2_alt	2682658	2683085	chr6_GL000256v2_alt:2682658-2683085	7	+	2682658	2682658	16724991	1	427,	0,
#Deleted in new
chr6_GL000256v2_alt	2684336	2684554	chr6_GL000256v2_alt:2684336-2684554	7	-	2684336	2684336	16724991	2	5,51,	0,167,
#Deleted in new
chr6_GL000256v2_alt	2702060	2717592	chr6_GL000256v2_alt:2702060-2717592	3	+	2712991	2714708	789624	6	980,255,116,279,136,304,	0,10759,11460,12163,12541,15228,
#Deleted in new
chr6_GL000256v2_alt	2702060	2717590	chr6_GL000256v2_alt:2702060-2717590	1	+	2713040	2714708	789624	6	1000,255,288,279,136,302,	0,10759,11288,12163,12541,15228,
#Deleted in new
chr6_GL000256v2_alt	2702923	2713074	chr6_GL000256v2_alt:2702923-2713074	0	+	2702923	2702923	8553170	2	117,255,	0,9896,
#Deleted in new
chr6_GL000256v2_alt	2703025	2717592	chr6_GL000256v2_alt:2703025-2717592	1	+	2705908	2714708	789624	8	15,200,258,255,288,279,136,304,	0,1407,2695,9794,10323,11198,11576,14263,
#Deleted in new
chr6_GL000256v2_alt	2704427	2704526	chr6_GL000256v2_alt:2704427-2704526	3	-	2704427	2704427	8553170	1	99,	0,
#Deleted in new
chr6_GL000256v2_alt	2705814	2718516	chr6_GL000256v2_alt:2705814-2718516	1	+	2705908	2714708	789624	6	164,255,159,279,136,1228,	0,7005,7663,8409,8787,11474,
#Deleted in new
chr6_GL000256v2_alt	2705842	2717590	chr6_GL000256v2_alt:2705842-2717590	1	+	2705908	2714708	789624	6	136,255,288,279,136,302,	0,6977,7506,8381,8759,11446,
#Deleted in new
chr6_GL000256v2_alt	2705947	2717592	chr6_GL000256v2_alt:2705947-2717592	0	+	2705947	2714708	789624	5	31,255,279,136,304,	0,6872,8276,8654,11341,
#Deleted in new
chr6_GL000256v2_alt	2713139	2714737	chr6_GL000256v2_alt:2713139-2714737	0	+	2713139	2713139	8553170	3	497,279,136,	0,1084,1462,
#Deleted in new
chr6_GL000256v2_alt	2743885	2749189	chr6_GL000256v2_alt:2743885-2749189	3	+	2743885	2743885	8553170	2	645,1498,	0,3806,
#Deleted in new
chr6_GL000256v2_alt	2762423	2765058	chr6_GL000256v2_alt:2762423-2765058	3	+	2762423	2762423	789624	2	105,2439,	0,196,
#Deleted in new
chr6_GL000256v2_alt	2762433	2763066	chr6_GL000256v2_alt:2762433-2763066	0	+	2762433	2762433	8553170	3	95,138,228,	0,186,405,
#Deleted in new
chr6_GL000256v2_alt	2795983	2796085	chr6_GL000256v2_alt:2795983-2796085	3	-	2795983	2795983	8553170	1	102,	0,
#Deleted in new
chr6_GL000256v2_alt	2797380	2810410	chr6_GL000256v2_alt:2797380-2810410	3	+	2797488	2809191	789624	6	178,255,159,279,132,1347,	0,7518,8173,8923,9301,11683,
#Deleted in new
chr6_GL000256v2_alt	2797409	2810410	chr6_GL000256v2_alt:2797409-2810410	1	+	2797488	2809191	789624	6	149,255,288,279,132,1347,	0,7489,8015,8894,9272,11654,
#Deleted in new
chr6_GL000256v2_alt	2805216	2806813	chr6_GL000256v2_alt:2805216-2806813	0	+	2805216	2805216	8553170	3	496,279,132,	0,1087,1465,
#Deleted in new
chr6_GL000256v2_alt	2818762	2819574	chr6_GL000256v2_alt:2818762-2819574	7	-	2818762	2818762	16724991	2	171,327,	0,485,
#Deleted in new
chr6_GL000256v2_alt	2827397	2827977	chr6_GL000256v2_alt:2827397-2827977	7	+	2827397	2827397	16724991	1	580,	0,
#Deleted in new
chr6_GL000256v2_alt	2828000	2829516	chr6_GL000256v2_alt:2828000-2829516	3	+	2828298	2829219	789624	2	469,486,	0,1030,
#Deleted in new
chr6_GL000256v2_alt	2829502	2841732	chr6_GL000256v2_alt:2829502-2841732	1	-	2829717	2839816	0	11	232,148,145,110,132,119,184,93,128,343,499,	0,560,834,1077,2561,5148,6281,8544,8928,10103,11731,
#Deleted in new
chr6_GL000256v2_alt	2829502	2841732	chr6_GL000256v2_alt:2829502-2841732	3	-	2829717	2839816	0	11	232,148,145,110,132,119,184,93,128,213,499,	0,560,834,1077,2561,5148,6281,8544,8928,10103,11731,
#Deleted in new
chr6_GL000256v2_alt	2829502	2839820	chr6_GL000256v2_alt:2829502-2839820	1	-	2830077	2839816	789624	10	232,171,145,110,132,119,184,93,128,215,	0,560,834,1077,2561,5148,6281,8544,8928,10103,
#Deleted in new
chr6_GL000256v2_alt	2829502	2845866	chr6_GL000256v2_alt:2829502-2845866	3	-	2841315	2845843	789624	13	232,148,145,110,132,119,184,93,128,343,199,101,105,	0,560,834,1077,2561,5148,6281,8544,8928,10103,11731,15890,16259,
#Deleted in new
chr6_GL000256v2_alt	2829502	2831028	chr6_GL000256v2_alt:2829502-2831028	0	-	2829502	2829502	8553170	4	232,148,145,449,	0,560,834,1077,
#Deleted in new
chr6_GL000256v2_alt	2829502	2841301	chr6_GL000256v2_alt:2829502-2841301	0	-	2829502	2829502	8553170	10	232,148,145,110,2706,184,93,128,213,68,	0,560,834,1077,2561,6281,8544,8928,10103,11731,
#Deleted in new
chr6_GL000256v2_alt	2829502	2834759	chr6_GL000256v2_alt:2829502-2834759	0	-	2830389	2834759	789624	6	232,148,126,110,132,109,	0,560,834,1077,2561,5148,
#Deleted in new
chr6_GL000256v2_alt	2829526	2830219	chr6_GL000256v2_alt:2829526-2830219	0	-	2829526	2829526	8553170	2	507,111,	0,582,
#Deleted in new
chr6_GL000256v2_alt	2830062	2833795	chr6_GL000256v2_alt:2830062-2833795	0	-	2830062	2833795	789624	5	148,145,110,132,26,	0,274,517,2001,3707,
#Deleted in new
chr6_GL000256v2_alt	2830399	2830955	chr6_GL000256v2_alt:2830399-2830955	0	-	2830399	2830399	8553170	2	63,376,	0,180,
#Deleted in new
chr6_GL000256v2_alt	2830557	2841685	chr6_GL000256v2_alt:2830557-2841685	0	-	2830557	2830557	8553170	6	132,132,119,184,213,452,	0,1506,4093,5226,9048,10676,
#Deleted in new
chr6_GL000256v2_alt	2830585	2841265	chr6_GL000256v2_alt:2830585-2841265	0	-	2830585	2839803	789624	6	104,132,119,184,343,32,	0,1478,4065,5198,9020,10648,
#Deleted in new
chr6_GL000256v2_alt	2831696	2841285	chr6_GL000256v2_alt:2831696-2841285	0	-	2831696	2831696	8553170	5	3073,184,93,128,1680,	0,4087,6350,6734,7909,
#Deleted in new
chr6_GL000256v2_alt	2832063	2840815	chr6_GL000256v2_alt:2832063-2840815	0	-	2832063	2839816	789624	7	132,119,184,93,128,213,136,	0,2587,3720,5983,6367,7542,8616,
#Deleted in new
chr6_GL000256v2_alt	2834671	2841302	chr6_GL000256v2_alt:2834671-2841302	0	-	2834671	2839816	789624	6	98,184,93,128,245,69,	0,1112,3375,3759,4934,6562,
#Deleted in new
chr6_GL000256v2_alt	2834678	2840768	chr6_GL000256v2_alt:2834678-2840768	0	-	2834678	2839816	789624	6	91,184,93,128,343,89,	0,1105,3368,3752,4927,6001,
#Deleted in new
chr6_GL000256v2_alt	2834690	2841221	chr6_GL000256v2_alt:2834690-2841221	0	-	2834690	2839816	789624	6	79,184,93,128,343,105,	0,1093,3356,3740,4915,6426,
#Deleted in new
chr6_GL000256v2_alt	2835657	2835733	chr6_GL000256v2_alt:2835657-2835733	3	-	2835657	2835657	789624	1	76,	0,
#Deleted in new
chr6_GL000256v2_alt	2835892	2841273	chr6_GL000256v2_alt:2835892-2841273	0	-	2835892	2839816	789624	5	75,177,128,213,40,	0,2154,2538,3713,5341,
#Deleted in new
chr6_GL000256v2_alt	2835906	2841013	chr6_GL000256v2_alt:2835906-2841013	0	-	2835906	2840984	789624	5	61,93,128,213,96,	0,2140,2524,3699,5011,
#Deleted in new
chr6_GL000256v2_alt	2838102	2841270	chr6_GL000256v2_alt:2838102-2841270	0	-	2838102	2839816	789624	5	37,128,343,175,37,	0,328,1503,2334,3131,
#Deleted in new
chr6_GL000256v2_alt	2838114	2841275	chr6_GL000256v2_alt:2838114-2841275	0	-	2838114	2840479	789624	5	25,128,213,175,42,	0,316,1491,2322,3119,
#Deleted in new
chr6_GL000256v2_alt	2838165	2841287	chr6_GL000256v2_alt:2838165-2841287	0	-	2838165	2839816	789624	4	58,128,343,54,	0,265,1440,3068,
#Deleted in new
chr6_GL000256v2_alt	2838482	2841157	chr6_GL000256v2_alt:2838482-2841157	0	-	2838482	2839816	789624	3	76,343,240,	0,1123,2435,
#Deleted in new
chr6_GL000256v2_alt	2840384	2840462	chr6_GL000256v2_alt:2840384-2840462	3	-	2840384	2840384	789624	1	78,	0,
#Deleted in new
chr6_GL000256v2_alt	2841587	2842415	chr6_GL000256v2_alt:2841587-2842415	3	+	2841587	2841587	789624	2	93,427,	0,401,
#Deleted in new
chr6_GL000256v2_alt	2841656	2842422	chr6_GL000256v2_alt:2841656-2842422	0	+	2841656	2841656	8553170	2	24,430,	0,336,
#Deleted in new
chr6_GL000256v2_alt	2843745	2845891	chr6_GL000256v2_alt:2843745-2845891	1	-	2844691	2845843	789624	3	1120,101,130,	0,1647,2016,
#Deleted in new
chr6_GL000256v2_alt	2843745	2845921	chr6_GL000256v2_alt:2843745-2845921	1	-	2844691	2845843	789624	3	1078,23,160,	0,1725,2016,
#Deleted in new
chr6_GL000256v2_alt	2844567	2846039	chr6_GL000256v2_alt:2844567-2846039	0	-	2844567	2844567	8553170	3	298,161,124,	0,765,1348,
#Deleted in new
chr6_GL000256v2_alt	2844700	2846132	chr6_GL000256v2_alt:2844700-2846132	2	-	2844700	2844700	8553170	3	165,101,217,	0,692,1215,
#Deleted in new
chr6_GL000256v2_alt	2846153	2858110	chr6_GL000256v2_alt:2846153-2858110	1	+	2847457	2857892	789624	4	104,277,222,808,	0,1292,10755,11149,
#Deleted in new
chr6_GL000256v2_alt	2846863	2858110	chr6_GL000256v2_alt:2846863-2858110	1	+	2846977	2857892	789624	4	171,277,222,808,	0,582,10045,10439,
#Deleted in new
chr6_GL000256v2_alt	2846895	2858110	chr6_GL000256v2_alt:2846895-2858110	3	+	2846977	2857892	789624	4	139,277,177,808,	0,550,10013,10407,
#Deleted in new
chr6_GL000256v2_alt	2846922	2856986	chr6_GL000256v2_alt:2846922-2856986	0	+	2846977	2856022	789624	4	112,277,87,78,	0,523,9056,9986,
#Deleted in new
chr6_GL000256v2_alt	2846943	2857240	chr6_GL000256v2_alt:2846943-2857240	0	+	2846943	2846943	8553170	3	91,277,332,	0,502,9965,
#Deleted in new
chr6_GL000256v2_alt	2871333	2873604	chr6_GL000256v2_alt:2871333-2873604	3	+	2872022	2872973	0	4	249,108,106,1044,	0,680,874,1227,
#Deleted in new
chr6_GL000256v2_alt	2871549	2873604	chr6_GL000256v2_alt:2871549-2873604	0	+	2871549	2871549	8553170	3	33,300,1044,	0,464,1011,
#Deleted in new
chr6_GL000256v2_alt	2871562	2873604	chr6_GL000256v2_alt:2871562-2873604	1	+	2872022	2872973	0	4	164,108,106,1044,	0,451,645,998,
#Deleted in new
chr6_GL000256v2_alt	2871573	2873604	chr6_GL000256v2_alt:2871573-2873604	0	+	2871573	2871573	8553170	3	153,300,1044,	0,440,987,
#Deleted in new
chr6_GL000256v2_alt	2874846	2877616	chr6_GL000256v2_alt:2874846-2877616	3	+	2875021	2876817	0	4	361,46,48,1221,	0,967,1200,1549,
#Deleted in new
chr6_GL000256v2_alt	2879834	2881705	chr6_GL000256v2_alt:2879834-2881705	3	-	2879988	2881697	0	4	609,72,46,170,	0,1004,1259,1701,
#Deleted in new
chr6_GL000256v2_alt	2879834	2881802	chr6_GL000256v2_alt:2879834-2881802	0	-	2879834	2879834	8553170	3	609,72,27,	0,1004,1941,
#Deleted in new
chr6_GL000256v2_alt	2879834	2881707	chr6_GL000256v2_alt:2879834-2881707	0	-	2879834	2879834	8553170	3	609,72,172,	0,1004,1701,
#Deleted in new
chr6_GL000256v2_alt	2885404	2888190	chr6_GL000256v2_alt:2885404-2888190	3	+	2886580	2887957	789624	4	192,119,23,392,	0,1076,1820,2394,
#Deleted in new
chr6_GL000256v2_alt	2885459	2888190	chr6_GL000256v2_alt:2885459-2888190	1	+	2886580	2887957	789624	5	137,119,93,23,392,	0,1021,1462,1765,2339,
#Deleted in new
chr6_GL000256v2_alt	2885474	2888190	chr6_GL000256v2_alt:2885474-2888190	0	+	2885474	2885474	8553170	2	122,1710,	0,1006,
#Deleted in new
chr6_GL000256v2_alt	2885497	2888190	chr6_GL000256v2_alt:2885497-2888190	1	+	2886580	2887866	789624	3	99,119,347,	0,983,2346,
#Deleted in new
chr6_GL000256v2_alt	2885497	2888190	chr6_GL000256v2_alt:2885497-2888190	1	+	2886580	2887866	789624	3	99,119,392,	0,983,2301,
#Deleted in new
chr6_GL000256v2_alt	2885500	2888190	chr6_GL000256v2_alt:2885500-2888190	1	+	2886580	2887957	789624	4	96,119,23,347,	0,980,1724,2343,
#Deleted in new
chr6_GL000256v2_alt	2885515	2888190	chr6_GL000256v2_alt:2885515-2888190	0	+	2885515	2885515	8553170	3	81,123,1359,	0,965,1316,
#Deleted in new
chr6_GL000256v2_alt	2885979	2888190	chr6_GL000256v2_alt:2885979-2888190	1	+	2886580	2887866	789624	4	109,119,93,413,	0,501,942,1798,
#Deleted in new
chr6_GL000256v2_alt	2886128	2888190	chr6_GL000256v2_alt:2886128-2888190	1	+	2886580	2887866	789624	3	92,119,392,	0,352,1670,
#Deleted in new
chr6_GL000256v2_alt	2886175	2887011	chr6_GL000256v2_alt:2886175-2887011	0	+	2886580	2887011	789624	3	45,119,90,	0,305,746,
#Deleted in new
chr6_GL000256v2_alt	2886289	2888190	chr6_GL000256v2_alt:2886289-2888190	1	+	2886580	2887866	789624	3	108,119,392,	0,191,1509,
#Deleted in new
chr6_GL000256v2_alt	2886302	2888190	chr6_GL000256v2_alt:2886302-2888190	1	+	2886580	2887866	789624	2	297,392,	0,1496,
#Deleted in new
chr6_GL000256v2_alt	2886312	2888190	chr6_GL000256v2_alt:2886312-2888190	1	+	2886580	2887957	789624	5	85,119,93,23,392,	0,168,609,912,1486,
#Deleted in new
chr6_GL000256v2_alt	2886346	2888190	chr6_GL000256v2_alt:2886346-2888190	1	+	2886580	2887957	789624	3	253,23,392,	0,878,1452,
#Deleted in new
chr6_GL000256v2_alt	2886360	2888190	chr6_GL000256v2_alt:2886360-2888190	1	+	2886580	2887957	789624	4	37,119,23,392,	0,120,864,1438,
#Deleted in new
chr6_GL000256v2_alt	2886366	2887122	chr6_GL000256v2_alt:2886366-2887122	0	+	2886580	2887122	789624	4	21,119,93,26,	0,114,555,730,
#Deleted in new
chr6_GL000256v2_alt	2886377	2888190	chr6_GL000256v2_alt:2886377-2888190	1	+	2886580	2887866	789624	4	20,119,93,392,	0,103,544,1421,
#Deleted in new
chr6_GL000256v2_alt	2886397	2888190	chr6_GL000256v2_alt:2886397-2888190	1	+	2886580	2887957	789624	4	202,93,23,347,	0,524,827,1446,
#Deleted in new
chr6_GL000256v2_alt	2886480	2888190	chr6_GL000256v2_alt:2886480-2888190	1	+	2886580	2887866	789624	2	119,413,	0,1297,
#Deleted in new
chr6_GL000256v2_alt	2886480	2888190	chr6_GL000256v2_alt:2886480-2888190	1	+	2886580	2887957	789624	4	119,93,23,413,	0,441,744,1297,
#Deleted in new
chr6_GL000256v2_alt	2886480	2888190	chr6_GL000256v2_alt:2886480-2888190	1	+	2886580	2887957	789624	3	119,23,413,	0,744,1297,
#Deleted in new
chr6_GL000256v2_alt	2886535	2888190	chr6_GL000256v2_alt:2886535-2888190	0	+	2886535	2886535	8553170	3	64,151,392,	0,561,1263,
#Deleted in new
chr6_GL000256v2_alt	2886584	2888190	chr6_GL000256v2_alt:2886584-2888190	0	+	2886584	2887866	789624	3	15,93,347,	0,337,1259,
#Deleted in new
chr6_GL000256v2_alt	2888175	2892265	chr6_GL000256v2_alt:2888175-2892265	1	-	2888474	2892001	0	4	337,108,345,307,	0,631,887,3783,
#Deleted in new
chr6_GL000256v2_alt	2888175	2892265	chr6_GL000256v2_alt:2888175-2892265	1	-	2888347	2892001	0	4	282,108,345,307,	0,631,887,3783,
#Deleted in new
chr6_GL000256v2_alt	2888175	2892092	chr6_GL000256v2_alt:2888175-2892092	0	-	2888175	2888175	8553170	4	337,108,118,22,	0,631,887,3895,
#Deleted in new
chr6_GL000256v2_alt	2888175	2892239	chr6_GL000256v2_alt:2888175-2892239	0	-	2888175	2888175	8553170	4	337,108,345,103,	0,631,887,3961,
#Deleted in new
chr6_GL000256v2_alt	2888555	2892265	chr6_GL000256v2_alt:2888555-2892265	1	-	2888592	2892001	0	4	114,108,345,307,	0,251,507,3403,
#Deleted in new
chr6_GL000256v2_alt	2888577	2892029	chr6_GL000256v2_alt:2888577-2892029	3	-	2888592	2892001	0	5	92,108,118,152,71,	0,229,485,678,3381,
#Deleted in new
chr6_GL000256v2_alt	2888577	2892029	chr6_GL000256v2_alt:2888577-2892029	0	-	2888899	2892001	789624	4	92,108,290,71,	0,229,540,3381,
#Deleted in new
chr6_GL000256v2_alt	2910369	2910643	chr6_GL000256v2_alt:2910369-2910643	7	-	2910369	2910369	16724991	1	274,	0,
#Deleted in new
chr6_GL000256v2_alt	2914469	2916307	chr6_GL000256v2_alt:2914469-2916307	3	+	2914615	2916186	0	6	171,62,67,42,163,206,	0,337,486,920,1160,1632,
#Deleted in new
chr6_GL000256v2_alt	2914502	2915626	chr6_GL000256v2_alt:2914502-2915626	0	+	2914502	2914502	8553170	3	77,62,671,	0,304,453,
#Deleted in new
chr6_GL000256v2_alt	2914512	2916307	chr6_GL000256v2_alt:2914512-2916307	0	+	2914512	2916186	789624	6	67,62,67,42,163,206,	0,294,443,877,1117,1589,
#Deleted in new
chr6_GL000256v2_alt	2914565	2916307	chr6_GL000256v2_alt:2914565-2916307	0	+	2914565	2914565	8553170	4	75,62,837,206,	0,241,390,1536,
#Deleted in new
chr6_GL000256v2_alt	2914911	2916307	chr6_GL000256v2_alt:2914911-2916307	0	+	2914911	2914911	8553170	3	111,163,206,	0,718,1190,
#Deleted in new
chr6_GL000256v2_alt	2915276	2916307	chr6_GL000256v2_alt:2915276-2916307	1	+	2915397	2916186	0	3	155,163,206,	0,353,825,
#Deleted in new
chr6_GL000256v2_alt	2920001	2937052	chr6_GL000256v2_alt:2920001-2937052	3	+	2922068	2936867	789624	31	139,175,178,100,73,144,152,80,143,91,217,475,191,298,211,1854,269,131,130,86,225,141,72,168,83,211,99,213,95,91,326,	0,2004,3010,3539,3728,4449,4738,5070,5298,6050,6260,7043,8422,8826,9870,10418,12658,13138,13515,13751,14032,14411,14673,14861,15246,15488,15789,16012,16321,16513,16725,
#Deleted in new
chr6_GL000256v2_alt	2920005	2926142	chr6_GL000256v2_alt:2920005-2926142	0	+	2920005	2920005	8553170	8	135,100,73,144,152,80,143,91,	0,3535,3724,4445,4734,5066,5294,6046,
#Deleted in new
chr6_GL000256v2_alt	2920006	2937052	chr6_GL000256v2_alt:2920006-2937052	1	+	2922068	2936867	789624	31	134,212,178,100,73,144,152,80,143,91,217,475,191,298,211,1854,269,131,130,86,225,141,72,168,83,211,99,213,95,91,326,	0,1962,3005,3534,3723,4444,4733,5065,5293,6045,6255,7038,8417,8821,9865,10413,12653,13133,13510,13746,14027,14406,14668,14856,15241,15483,15784,16007,16316,16508,16720,
#Deleted in new
chr6_GL000256v2_alt	2922357	2922489	chr6_GL000256v2_alt:2922357-2922489	3	+	2922357	2922357	789624	1	132,	0,
#Deleted in new
chr6_GL000256v2_alt	2924181	2924777	chr6_GL000256v2_alt:2924181-2924777	0	+	2924181	2924181	8553170	2	413,38,	0,558,
#Deleted in new
chr6_GL000256v2_alt	2925033	2926354	chr6_GL000256v2_alt:2925033-2926354	0	+	2925033	2925033	8553170	3	409,91,93,	0,1018,1228,
#Deleted in new
chr6_GL000256v2_alt	2927919	2929048	chr6_GL000256v2_alt:2927919-2929048	0	+	2927919	2927919	8553170	2	695,221,	0,908,
#Deleted in new
chr6_GL000256v2_alt	2933234	2934037	chr6_GL000256v2_alt:2933234-2934037	0	+	2933234	2933234	8553170	2	412,285,	0,518,
#Deleted in new
chr6_GL000256v2_alt	2933687	2934597	chr6_GL000256v2_alt:2933687-2934597	0	+	2933687	2933687	8553170	2	571,185,	0,725,
#Deleted in new
chr6_GL000256v2_alt	2934522	2934990	chr6_GL000256v2_alt:2934522-2934990	0	+	2934522	2934522	8553170	2	31,316,	0,152,
#Deleted in new
chr6_GL000256v2_alt	2934640	2935531	chr6_GL000256v2_alt:2934640-2935531	0	+	2934640	2934640	8553170	2	690,42,	0,849,
#Deleted in new
chr6_GL000256v2_alt	2934656	2936092	chr6_GL000256v2_alt:2934656-2936092	0	+	2934656	2934656	8553170	4	90,468,211,302,	0,206,833,1134,
#Deleted in new
chr6_GL000256v2_alt	2935527	2937052	chr6_GL000256v2_alt:2935527-2937052	0	+	2935527	2935527	8553170	5	173,99,213,95,538,	0,263,486,795,987,
#Deleted in new
chr6_GL000256v2_alt	2935816	2937052	chr6_GL000256v2_alt:2935816-2937052	0	+	2935816	2935816	8553170	3	73,404,538,	0,197,698,
#Deleted in new
chr6_GL000256v2_alt	2936115	2937052	chr6_GL000256v2_alt:2936115-2937052	0	+	2936115	2936115	8553170	3	302,91,326,	0,399,611,
#Deleted in new
chr6_GL000256v2_alt	2938303	2951983	chr6_GL000256v2_alt:2938303-2951983	1	-	2938410	2951037	0	25	203,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,282,	0,477,1176,1362,1622,1769,2081,2297,2516,2753,3089,3806,4870,5062,5505,5926,6387,7374,8570,9657,9891,10179,10490,12626,13398,
#Deleted in new
chr6_GL000256v2_alt	2938303	2951671	chr6_GL000256v2_alt:2938303-2951671	1	-	2938410	2951037	0	25	203,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,151,	0,477,1176,1362,1622,1769,2081,2297,2516,2753,3089,3806,4870,5062,5505,5926,6387,7374,8570,9657,9891,10179,10490,12626,13217,
#Deleted in new
chr6_GL000256v2_alt	2938303	2951913	chr6_GL000256v2_alt:2938303-2951913	3	-	2938410	2951037	0	25	203,147,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,254,75,54,197,118,121,236,	0,477,1176,1362,1622,1769,2081,2297,2516,2753,3089,3806,4870,5062,5505,5926,6387,7374,8570,9657,9891,10179,10490,12626,13374,
#Deleted in new
chr6_GL000256v2_alt	2938303	2939069	chr6_GL000256v2_alt:2938303-2939069	0	-	2938303	2938303	8553170	2	203,289,	0,477,
#Deleted in new
chr6_GL000256v2_alt	2938303	2939820	chr6_GL000256v2_alt:2938303-2939820	0	-	2938303	2938303	8553170	4	203,147,108,155,	0,477,1176,1362,
#Deleted in new
chr6_GL000256v2_alt	2938304	2951978	chr6_GL000256v2_alt:2938304-2951978	1	-	2938410	2951037	0	24	202,108,144,60,147,125,103,54,170,292,287,88,113,78,253,198,130,236,75,54,197,118,121,277,	0,1175,1361,1621,1768,2080,2296,2515,2752,3088,3805,4869,5061,5504,5925,6386,7373,8569,9656,9890,10178,10489,12625,13397,
#Deleted in new
chr6_GL000256v2_alt	2938304	2951978	chr6_GL000256v2_alt:2938304-2951978	1	-	2938410	2951037	0	23	202,108,60,147,125,103,54,170,189,15,85,113,78,253,198,130,236,75,54,197,118,121,277,	0,1175,1621,1768,2080,2296,2515,2752,3088,4077,4869,5061,5504,5925,6386,7373,8569,9656,9890,10178,10489,12625,13397,
#Deleted in new
chr6_GL000256v2_alt	2938410	2940218	chr6_GL000256v2_alt:2938410-2940218	0	-	2938413	2940218	789624	4	96,108,60,146,	0,1069,1515,1662,
#Deleted in new
chr6_GL000256v2_alt	2938410	2940509	chr6_GL000256v2_alt:2938410-2940509	0	-	2938413	2940509	789624	6	96,108,144,60,147,125,	0,1069,1255,1515,1662,1974,
#Deleted in new
chr6_GL000256v2_alt	2940105	2941426	chr6_GL000256v2_alt:2940105-2941426	0	-	2940105	2940105	8553170	3	768,170,34,	0,951,1287,
#Deleted in new
chr6_GL000256v2_alt	2941128	2943600	chr6_GL000256v2_alt:2941128-2943600	0	-	2941128	2941128	8553170	5	98,292,287,88,235,	0,264,981,2045,2237,
#Deleted in new
chr6_GL000256v2_alt	2941499	2951956	chr6_GL000256v2_alt:2941499-2951956	0	-	2941499	2951037	789624	16	185,287,88,113,108,78,253,198,130,236,75,54,197,118,121,166,	0,610,1674,1866,2091,2309,2730,3191,4178,5374,6461,6695,6983,7294,9430,10291,
#Deleted in new
chr6_GL000256v2_alt	2941964	2943484	chr6_GL000256v2_alt:2941964-2943484	0	-	2941964	2941964	8553170	3	432,88,119,	0,1209,1401,
#Deleted in new
chr6_GL000256v2_alt	2942112	2944353	chr6_GL000256v2_alt:2942112-2944353	0	-	2942112	2944353	789624	5	284,88,113,105,124,	0,1061,1253,1696,2117,
#Deleted in new
chr6_GL000256v2_alt	2942150	2944774	chr6_GL000256v2_alt:2942150-2944774	0	-	2942150	2944774	789624	7	246,88,113,78,96,31,84,	0,1023,1215,1658,2079,2301,2540,
#Deleted in new
chr6_GL000256v2_alt	2942239	2944845	chr6_GL000256v2_alt:2942239-2944845	0	-	2942239	2942239	8553170	4	157,88,253,155,	0,934,1990,2451,
#Deleted in new
chr6_GL000256v2_alt	2942393	2944787	chr6_GL000256v2_alt:2942393-2944787	0	-	2942393	2944787	789624	5	3,88,113,253,97,	0,780,972,1836,2297,
#Deleted in new
chr6_GL000256v2_alt	2943600	2951664	chr6_GL000256v2_alt:2943600-2951664	0	-	2943600	2951037	789624	12	98,78,253,198,130,236,75,54,197,118,121,156,	0,208,629,1090,2077,3273,4360,4594,4882,5193,7329,7908,
#Deleted in new
chr6_GL000256v2_alt	2943777	2944469	chr6_GL000256v2_alt:2943777-2944469	0	-	2943777	2943777	8553170	2	109,240,	0,452,
#Deleted in new
chr6_GL000256v2_alt	2946873	2951632	chr6_GL000256v2_alt:2946873-2951632	0	-	2946873	2951037	789624	6	236,75,197,118,121,112,	0,1087,1609,1920,4056,4647,
#Deleted in new
chr6_GL000256v2_alt	2946873	2951432	chr6_GL000256v2_alt:2946873-2951432	0	-	2946873	2951037	789624	7	236,75,54,197,118,121,79,	0,1087,1321,1609,1920,4056,4480,
#Deleted in new
chr6_GL000256v2_alt	2946873	2951194	chr6_GL000256v2_alt:2946873-2951194	0	-	2946873	2951037	789624	6	236,75,197,118,121,19,	0,1087,1609,1920,4056,4302,
#Deleted in new
chr6_GL000256v2_alt	2946875	2951427	chr6_GL000256v2_alt:2946875-2951427	0	-	2946875	2951037	789624	7	234,75,54,197,118,121,252,	0,1085,1319,1607,1918,4054,4300,
#Deleted in new
chr6_GL000256v2_alt	2946876	2951926	chr6_GL000256v2_alt:2946876-2951926	0	-	2946876	2951037	789624	6	233,75,197,118,121,249,	0,1084,1606,1917,4053,4801,
#Deleted in new
chr6_GL000256v2_alt	2946882	2951249	chr6_GL000256v2_alt:2946882-2951249	0	-	2946882	2951037	789624	7	227,75,54,197,118,121,110,	0,1078,1312,1600,1911,4047,4257,
#Deleted in new
chr6_GL000256v2_alt	2946886	2951945	chr6_GL000256v2_alt:2946886-2951945	0	-	2946886	2951037	789624	7	223,75,54,197,118,121,268,	0,1074,1308,1596,1907,4043,4791,
#Deleted in new
chr6_GL000256v2_alt	2946962	2951597	chr6_GL000256v2_alt:2946962-2951597	0	-	2946962	2951037	789624	6	147,75,197,118,121,89,	0,998,1520,1831,3967,4546,
#Deleted in new
chr6_GL000256v2_alt	2946981	2951923	chr6_GL000256v2_alt:2946981-2951923	0	-	2946981	2951037	789624	7	146,75,54,197,118,121,133,	0,979,1213,1501,1812,3948,4809,
#Deleted in new
chr6_GL000256v2_alt	2946988	2951723	chr6_GL000256v2_alt:2946988-2951723	0	-	2946988	2951037	789624	6	121,75,197,118,121,22,	0,972,1494,1805,3941,4713,
#Deleted in new
chr6_GL000256v2_alt	2947070	2951253	chr6_GL000256v2_alt:2947070-2951253	0	-	2947070	2951037	789624	6	39,75,54,197,118,324,	0,890,1124,1412,1723,3859,
#Deleted in new
chr6_GL000256v2_alt	2948011	2951596	chr6_GL000256v2_alt:2948011-2951596	0	-	2948011	2948011	8553170	6	24,54,219,118,121,76,	0,183,471,782,2918,3509,
#Deleted in new
chr6_GL000256v2_alt	2948195	2951389	chr6_GL000256v2_alt:2948195-2951389	0	-	2948195	2951037	789624	5	53,197,118,121,55,	0,287,598,2734,3139,
#Deleted in new
chr6_GL000256v2_alt	2948513	2951916	chr6_GL000256v2_alt:2948513-2951916	0	-	2948513	2948513	8553170	4	188,118,121,215,	0,280,2416,3188,
#Deleted in new
chr6_GL000256v2_alt	2951693	2957487	chr6_GL000256v2_alt:2951693-2957487	3	+	2955850	2957366	0	6	136,155,74,99,99,147,	0,4055,4808,4963,5208,5647,
#Deleted in new
chr6_GL000256v2_alt	2951693	2957348	chr6_GL000256v2_alt:2951693-2957348	1	+	2955850	2957065	789624	5	136,155,74,99,447,	0,4055,4808,4963,5208,
#Deleted in new
chr6_GL000256v2_alt	2955170	2957487	chr6_GL000256v2_alt:2955170-2957487	1	+	2955243	2957366	0	6	187,155,74,99,99,147,	0,578,1331,1486,1731,2170,
#Deleted in new
chr6_GL000256v2_alt	2957574	2960049	chr6_GL000256v2_alt:2957574-2960049	3	-	2958339	2959224	789624	1	2475,	0,
#Deleted in new
chr6_GL000256v2_alt	2957605	2959996	chr6_GL000256v2_alt:2957605-2959996	3	+	2957605	2957605	8553170	2	351,320,	0,2071,
#Deleted in new
chr6_GL000256v2_alt	2960505	2965567	chr6_GL000256v2_alt:2960505-2965567	3	-	2961547	2963762	789624	4	1487,725,163,423,	0,2631,3619,4639,
#Deleted in new
chr6_GL000256v2_alt	2961357	2965145	chr6_GL000256v2_alt:2961357-2965145	1	-	2961547	2963762	789624	4	635,728,163,288,	0,1779,2767,3500,
#Deleted in new
chr6_GL000256v2_alt	2961357	2964674	chr6_GL000256v2_alt:2961357-2964674	1	-	2961547	2963762	789624	3	635,725,550,	0,1779,2767,
#Deleted in new
chr6_GL000256v2_alt	2961357	2964914	chr6_GL000256v2_alt:2961357-2964914	1	-	2961547	2963762	789624	4	635,728,163,72,	0,1779,2767,3485,
#Deleted in new
chr6_GL000256v2_alt	2961357	2965134	chr6_GL000256v2_alt:2961357-2965134	1	-	2961547	2963762	789624	4	635,725,163,277,	0,1779,2767,3500,
#Deleted in new
chr6_GL000256v2_alt	2962571	2962685	chr6_GL000256v2_alt:2962571-2962685	3	+	2962571	2962571	8553170	1	114,	0,
#Deleted in new
chr6_GL000256v2_alt	2963166	2965081	chr6_GL000256v2_alt:2963166-2965081	0	-	2963166	2963762	789624	3	695,67,224,	0,958,1691,
#Deleted in new
chr6_GL000256v2_alt	2963268	2964726	chr6_GL000256v2_alt:2963268-2964726	0	-	2963268	2963762	789624	3	596,163,43,	0,856,1415,
#Deleted in new
chr6_GL000256v2_alt	2963306	2964474	chr6_GL000256v2_alt:2963306-2964474	0	-	2963306	2963762	789624	3	558,163,101,	0,818,1067,
#Deleted in new
chr6_GL000256v2_alt	2963441	2965118	chr6_GL000256v2_alt:2963441-2965118	0	-	2963441	2963762	789624	3	423,67,261,	0,683,1416,
#Deleted in new
chr6_GL000256v2_alt	2963493	2964469	chr6_GL000256v2_alt:2963493-2964469	0	-	2963493	2963762	789624	3	368,163,96,	0,631,880,
#Deleted in new
chr6_GL000256v2_alt	2964519	2969354	chr6_GL000256v2_alt:2964519-2969354	1	+	2964731	2969210	789624	7	258,83,103,116,76,190,235,	0,1585,2632,3303,3861,4083,4600,
#Deleted in new
chr6_GL000256v2_alt	2965163	2971566	chr6_GL000256v2_alt:2965163-2971566	1	+	2966115	2971566	789624	7	329,83,103,116,76,129,419,	0,941,1988,2659,3217,5276,5984,
#Deleted in new
chr6_GL000256v2_alt	2965163	2971566	chr6_GL000256v2_alt:2965163-2971566	1	+	2966115	2971566	789624	5	329,83,103,77,234,	0,941,1988,2659,6169,
#Deleted in new
chr6_GL000256v2_alt	2965347	2969354	chr6_GL000256v2_alt:2965347-2969354	3	+	2966115	2969210	0	7	145,83,103,116,76,190,235,	0,757,1804,2475,3033,3255,3772,
#Deleted in new
chr6_GL000256v2_alt	2965364	2969354	chr6_GL000256v2_alt:2965364-2969354	0	+	2965364	2965364	8553170	5	128,83,103,970,235,	0,740,1787,2458,3755,
#Deleted in new
chr6_GL000256v2_alt	2965370	2967525	chr6_GL000256v2_alt:2965370-2967525	0	+	2965370	2965370	8553170	3	122,83,374,	0,734,1781,
#Deleted in new
chr6_GL000256v2_alt	2965377	2968748	chr6_GL000256v2_alt:2965377-2968748	0	+	2965377	2965377	8553170	5	115,83,103,116,368,	0,727,1774,2445,3003,
#Deleted in new
chr6_GL000256v2_alt	2965381	2969354	chr6_GL000256v2_alt:2965381-2969354	0	+	2965381	2965381	8553170	7	111,83,121,116,76,190,235,	0,723,1752,2441,2999,3221,3738,
#Deleted in new
chr6_GL000256v2_alt	2965385	2972830	chr6_GL000256v2_alt:2965385-2972830	1	+	2966115	2971148	789624	8	107,83,103,116,76,190,129,1683,	0,719,1766,2437,2995,3217,5054,5762,
#Deleted in new
chr6_GL000256v2_alt	2965575	2969354	chr6_GL000256v2_alt:2965575-2969354	1	+	2966115	2969210	0	7	105,83,103,116,76,190,235,	0,529,1576,2247,2805,3027,3544,
#Deleted in new
chr6_GL000256v2_alt	2965638	2969354	chr6_GL000256v2_alt:2965638-2969354	1	+	2966115	2969210	0	7	133,83,103,116,76,190,235,	0,466,1513,2184,2742,2964,3481,
#Deleted in new
chr6_GL000256v2_alt	2966103	2971630	chr6_GL000256v2_alt:2966103-2971630	1	+	2966115	2971148	789624	7	84,103,116,76,190,129,483,	0,1048,1719,2277,2499,4336,5044,
#Deleted in new
chr6_GL000256v2_alt	2968401	2972830	chr6_GL000256v2_alt:2968401-2972830	3	+	2968401	2971566	789624	4	55,36,129,1683,	0,1855,2038,2746,
#Deleted in new
chr6_GL000256v2_alt	2969662	2972830	chr6_GL000256v2_alt:2969662-2972830	0	+	2969662	2969662	8553170	2	906,1683,	0,1485,
#Deleted in new
chr6_GL000256v2_alt	2970234	2972830	chr6_GL000256v2_alt:2970234-2972830	0	+	2970234	2971566	789624	3	58,129,1683,	0,205,913,
#Deleted in new
chr6_GL000256v2_alt	2975967	2979662	chr6_GL000256v2_alt:2975967-2979662	1	-	2976240	2979658	789624	3	437,168,125,	0,2418,3570,
#Deleted in new
chr6_GL000256v2_alt	2975967	2983321	chr6_GL000256v2_alt:2975967-2983321	2	-	2976240	2983321	789624	4	437,168,292,53,	0,2418,6363,7301,
#Deleted in new
chr6_GL000256v2_alt	2975967	2979649	chr6_GL000256v2_alt:2975967-2979649	0	-	2975967	2975967	8553170	2	437,1264,	0,2418,
#Deleted in new
chr6_GL000256v2_alt	2975967	2983321	chr6_GL000256v2_alt:2975967-2983321	0	-	2975967	2975967	8553170	4	437,168,172,53,	0,2418,4546,7301,
#Deleted in new
chr6_GL000256v2_alt	2975967	2979649	chr6_GL000256v2_alt:2975967-2979649	0	-	2975967	2975967	8553170	3	437,168,206,	0,2418,3476,
#Deleted in new
chr6_GL000256v2_alt	2975967	2980760	chr6_GL000256v2_alt:2975967-2980760	0	-	2975967	2975967	8553170	3	437,168,247,	0,2418,4546,
#Deleted in new
chr6_GL000256v2_alt	2975967	2982491	chr6_GL000256v2_alt:2975967-2982491	0	-	2975967	2975967	8553170	6	437,207,168,159,212,161,	0,1738,2418,4546,4962,6363,
#Deleted in new
chr6_GL000256v2_alt	2980631	2981244	chr6_GL000256v2_alt:2980631-2981244	0	-	2980631	2980631	8553170	2	54,315,	0,298,
#Deleted in new
chr6_GL000256v2_alt	2986233	3002370	chr6_GL000256v2_alt:2986233-3002370	1	-	2986496	3002065	789624	18	347,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,462,	0,549,693,875,1092,1304,1778,2070,2636,3133,3594,4634,4859,6082,6414,10010,14007,15675,
#Deleted in new
chr6_GL000256v2_alt	2986239	2987678	chr6_GL000256v2_alt:2986239-2987678	0	-	2986239	2986239	8553170	5	341,47,99,77,353,	0,543,687,869,1086,
#Deleted in new
chr6_GL000256v2_alt	2986239	2989891	chr6_GL000256v2_alt:2986239-2989891	0	-	2986239	2986239	8553170	10	341,47,99,77,63,57,397,124,50,64,	0,543,687,869,1086,1298,1772,2630,3127,3588,
#Deleted in new
chr6_GL000256v2_alt	2986240	3002713	chr6_GL000256v2_alt:2986240-3002713	3	-	2986496	3002707	789624	20	340,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,67,57,267,	0,542,686,868,1085,1297,1771,2063,2629,3126,3587,4627,4852,6075,6407,10003,14000,14332,15130,16206,
#Deleted in new
chr6_GL000256v2_alt	2986240	3002637	chr6_GL000256v2_alt:2986240-3002637	0	-	2986240	2986240	789624	19	340,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,57,191,	0,542,686,868,1085,1297,1771,2063,2629,3126,3587,4627,4852,6075,6407,10003,14000,15130,16206,
#Deleted in new
chr6_GL000256v2_alt	2986240	3002370	chr6_GL000256v2_alt:2986240-3002370	0	-	2986240	2986240	789624	20	340,47,99,77,63,57,64,105,124,50,64,102,115,123,74,86,87,67,57,462,	0,542,686,868,1085,1297,1771,2063,2629,3126,3587,4627,4852,6075,6407,10003,14000,14332,15130,15668,
#Deleted in new
chr6_GL000256v2_alt	2986671	2987610	chr6_GL000256v2_alt:2986671-2987610	0	-	2986671	2986671	8553170	4	158,99,77,285,	0,255,437,654,
#Deleted in new
chr6_GL000256v2_alt	2986859	2987592	chr6_GL000256v2_alt:2986859-2987592	0	-	2986859	2986859	8553170	3	166,77,267,	0,249,466,
#Deleted in new
chr6_GL000256v2_alt	2986937	2989534	chr6_GL000256v2_alt:2986937-2989534	0	-	2986937	2986937	8553170	8	88,77,63,57,64,105,124,168,	0,171,388,600,1074,1366,1932,2429,
#Deleted in new
chr6_GL000256v2_alt	2987057	2990935	chr6_GL000256v2_alt:2987057-2990935	0	-	2987057	2987057	8553170	8	128,269,64,105,124,50,64,68,	0,268,954,1246,1812,2309,2770,3810,
#Deleted in new
chr6_GL000256v2_alt	2988303	3002630	chr6_GL000256v2_alt:2988303-3002630	0	-	2988303	2988303	8553170	11	105,124,50,64,102,115,123,74,86,87,184,	0,566,1063,1524,2564,2789,4012,4344,7940,11937,14143,
#Deleted in new
chr6_GL000256v2_alt	2989844	3002163	chr6_GL000256v2_alt:2989844-3002163	0	-	2989844	3002065	789624	8	47,102,115,123,74,86,87,255,	0,1023,1248,2471,2803,6399,10396,12064,
#Deleted in new
chr6_GL000256v2_alt	2990734	2992345	chr6_GL000256v2_alt:2990734-2992345	0	-	2990734	2990734	8553170	3	235,115,30,	0,358,1581,
#Deleted in new
chr6_GL000256v2_alt	2990877	2991583	chr6_GL000256v2_alt:2990877-2991583	0	-	2990877	2990877	8553170	2	92,491,	0,215,
#Deleted in new
chr6_GL000256v2_alt	3006176	3009889	chr6_GL000256v2_alt:3006176-3009889	3	+	3006198	3009885	789624	6	74,330,264,156,67,29,	0,573,986,3143,3469,3684,
#Deleted in new
chr6_GL000256v2_alt	3006195	3017214	chr6_GL000256v2_alt:3006195-3017214	3	+	3006198	3017100	789624	6	55,330,264,156,123,338,	0,554,967,3124,8602,10681,
#Deleted in new
chr6_GL000256v2_alt	3011631	3013108	chr6_GL000256v2_alt:3011631-3013108	0	-	3011631	3013108	789624	3	206,126,52,	0,328,1425,
#Deleted in new
chr6_GL000256v2_alt	3011631	3013108	chr6_GL000256v2_alt:3011631-3013108	3	-	3011636	3013108	789624	3	205,126,52,	0,328,1425,
#Deleted in new
chr6_GL000256v2_alt	3011636	3013108	chr6_GL000256v2_alt:3011636-3013108	0	-	3011834	3013108	789624	2	449,52,	0,1420,
#Deleted in new
chr6_GL000256v2_alt	3011636	3013108	chr6_GL000256v2_alt:3011636-3013108	0	-	3011834	3013108	789624	3	221,126,52,	0,323,1420,
#Deleted in new
chr6_GL000256v2_alt	3014651	3017100	chr6_GL000256v2_alt:3014651-3017100	0	+	3014651	3017100	789624	3	55,123,345,	0,146,2104,
#Deleted in new
chr6_GL000256v2_alt	3014651	3017100	chr6_GL000256v2_alt:3014651-3017100	3	+	3014651	3017100	789624	3	55,123,224,	0,146,2225,
#Deleted in new
chr6_GL000256v2_alt	3014651	3017100	chr6_GL000256v2_alt:3014651-3017100	0	+	3014651	3014651	8553170	2	269,224,	0,2225,
#Deleted in new
chr6_GL000256v2_alt	3017889	3026006	chr6_GL000256v2_alt:3017889-3026006	0	+	3017889	3017889	8553170	7	90,135,43,348,91,258,1741,	0,4410,4808,5045,5548,5993,6376,
#Deleted in new
chr6_GL000256v2_alt	3017943	3021141	chr6_GL000256v2_alt:3017943-3021141	3	-	3018391	3020975	789624	3	663,111,218,	0,1445,2980,
#Deleted in new
chr6_GL000256v2_alt	3017943	3021002	chr6_GL000256v2_alt:3017943-3021002	0	-	3017943	3017943	8553170	4	663,111,111,79,	0,1445,2305,2980,
#Deleted in new
chr6_GL000256v2_alt	3022668	3026006	chr6_GL000256v2_alt:3022668-3026006	3	+	3022679	3024339	789624	6	72,348,91,41,99,1741,	0,266,769,1214,1373,1597,
#Deleted in new
chr6_GL000256v2_alt	3022679	3026006	chr6_GL000256v2_alt:3022679-3026006	0	+	3022679	3024370	789624	5	61,348,41,99,1741,	0,255,1203,1362,1586,
#Deleted in new
chr6_GL000256v2_alt	3022679	3026006	chr6_GL000256v2_alt:3022679-3026006	0	+	3022679	3024370	789624	6	61,348,91,41,80,1741,	0,255,758,1203,1381,1586,
#Deleted in new
chr6_GL000256v2_alt	3022679	3026006	chr6_GL000256v2_alt:3022679-3026006	0	+	3022679	3024339	789624	4	61,348,99,1741,	0,255,1362,1586,
#Deleted in new
chr6_GL000256v2_alt	3022679	3026006	chr6_GL000256v2_alt:3022679-3026006	0	+	3022679	3024370	789624	4	61,348,80,1741,	0,255,1381,1586,
#Deleted in new
chr6_GL000256v2_alt	3022679	3026006	chr6_GL000256v2_alt:3022679-3026006	0	+	3022679	3022679	8553170	5	61,348,91,41,1965,	0,255,758,1203,1362,
#Deleted in new
chr6_GL000256v2_alt	3022679	3026006	chr6_GL000256v2_alt:3022679-3026006	0	+	3022679	3022679	8553170	5	61,348,91,258,1741,	0,255,758,1203,1586,
#Deleted in new
chr6_GL000256v2_alt	3026333	3029559	chr6_GL000256v2_alt:3026333-3029559	1	-	3026532	3028457	789624	7	316,150,120,74,100,357,213,	0,505,1135,1413,1608,1827,3013,
#Deleted in new
chr6_GL000256v2_alt	3026333	3029088	chr6_GL000256v2_alt:3026333-3029088	1	-	3026532	3028457	789624	6	316,150,120,74,100,928,	0,505,1135,1413,1608,1827,
#Deleted in new
chr6_GL000256v2_alt	3026333	3029913	chr6_GL000256v2_alt:3026333-3029913	3	-	3026532	3028457	789624	7	316,150,120,74,100,361,567,	0,505,1135,1413,1608,1827,3013,
#Deleted in new
chr6_GL000256v2_alt	3026333	3028173	chr6_GL000256v2_alt:3026333-3028173	0	-	3026492	3028173	789624	6	316,101,120,74,100,13,	0,505,1135,1413,1608,1827,
#Deleted in new
chr6_GL000256v2_alt	3026333	3029558	chr6_GL000256v2_alt:3026333-3029558	0	-	3026333	3026333	8553170	5	316,150,120,100,212,	0,505,1135,1608,3013,
#Deleted in new
chr6_GL000256v2_alt	3026333	3029523	chr6_GL000256v2_alt:3026333-3029523	0	-	3026333	3026333	8553170	6	316,150,120,74,100,177,	0,505,1135,1413,1608,3013,
#Deleted in new
chr6_GL000256v2_alt	3026333	3028803	chr6_GL000256v2_alt:3026333-3028803	0	-	3026333	3026333	8553170	4	316,150,573,643,	0,505,1135,1827,
#Deleted in new
chr6_GL000256v2_alt	3026870	3029092	chr6_GL000256v2_alt:3026870-3029092	0	-	3026870	3028457	789624	6	118,120,74,100,361,114,	0,598,876,1071,1290,2108,
#Deleted in new
chr6_GL000256v2_alt	3026901	3028797	chr6_GL000256v2_alt:3026901-3028797	0	-	3026901	3028457	789624	6	87,120,74,100,361,140,	0,567,845,1040,1259,1756,
#Deleted in new
chr6_GL000256v2_alt	3027476	3029541	chr6_GL000256v2_alt:3027476-3029541	0	-	3027476	3027476	8553170	3	565,361,195,	0,684,1870,
#Deleted in new
chr6_GL000256v2_alt	3029876	3035874	chr6_GL000256v2_alt:3029876-3035874	1	-	3030137	3035602	0	7	423,182,107,126,110,151,28,	0,1636,2985,3255,3573,5687,5970,
#Deleted in new
chr6_GL000256v2_alt	3029876	3035869	chr6_GL000256v2_alt:3029876-3035869	1	-	3030137	3035602	0	6	423,182,107,126,110,306,	0,1636,2985,3255,3573,5687,
#Deleted in new
chr6_GL000256v2_alt	3029876	3036620	chr6_GL000256v2_alt:3029876-3036620	1	-	3030137	3035602	0	7	423,182,107,126,110,89,523,	0,1636,2985,3255,3573,5687,6221,
#Deleted in new
chr6_GL000256v2_alt	3029876	3039060	chr6_GL000256v2_alt:3029876-3039060	3	-	3030137	3035602	0	8	423,182,107,126,110,89,125,35,	0,1636,2985,3255,3573,5687,8684,9149,
#Deleted in new
chr6_GL000256v2_alt	3029878	3035847	chr6_GL000256v2_alt:3029878-3035847	1	-	3030137	3035602	0	7	421,182,107,126,110,89,63,	0,1634,2983,3253,3571,5685,5906,
#Deleted in new
chr6_GL000256v2_alt	3039287	3040583	chr6_GL000256v2_alt:3039287-3040583	0	+	3039763	3040583	789624	4	72,27,160,124,	0,203,463,1172,
#Deleted in new
chr6_GL000256v2_alt	3039313	3040583	chr6_GL000256v2_alt:3039313-3040583	0	+	3039763	3040583	789624	3	46,160,124,	0,437,1146,
#Deleted in new
chr6_GL000256v2_alt	3039317	3040583	chr6_GL000256v2_alt:3039317-3040583	0	+	3039763	3040583	789624	3	42,160,124,	0,433,1142,
#Deleted in new
chr6_GL000256v2_alt	3039317	3040583	chr6_GL000256v2_alt:3039317-3040583	0	+	3039763	3040583	789624	3	42,160,124,	0,433,1142,
#Deleted in new
chr6_GL000256v2_alt	3039317	3040583	chr6_GL000256v2_alt:3039317-3040583	0	+	3039763	3040583	789624	3	42,160,124,	0,433,1142,
#Deleted in new
chr6_GL000256v2_alt	3040542	3040583	chr6_GL000256v2_alt:3040542-3040583	0	+	3040542	3040542	8553170	1	41,	0,
#Deleted in new
chr6_GL000256v2_alt	3055883	3061968	chr6_GL000256v2_alt:3055883-3061968	1	+	3057420	3061823	789624	14	325,872,73,110,81,88,190,127,150,75,144,138,74,257,	0,830,1956,2174,2505,2833,3194,3498,4098,4596,4880,5226,5520,5828,
#Deleted in new
chr6_GL000256v2_alt	3056242	3056345	chr6_GL000256v2_alt:3056242-3056345	3	-	3056242	3056242	8553170	1	103,	0,
#Deleted in new
chr6_GL000256v2_alt	3057456	3061968	chr6_GL000256v2_alt:3057456-3061968	0	+	3057456	3061823	789624	13	129,73,110,81,88,190,127,150,75,144,138,74,257,	0,383,601,932,1260,1621,1925,2525,3023,3307,3653,3947,4255,
#Deleted in new
chr6_GL000256v2_alt	3057456	3058783	chr6_GL000256v2_alt:3057456-3058783	0	+	3057456	3058783	789624	5	129,88,110,81,67,	0,368,601,932,1260,
#Deleted in new
chr6_GL000256v2_alt	3057456	3061968	chr6_GL000256v2_alt:3057456-3061968	0	+	3057456	3061823	789624	13	129,73,110,81,88,190,127,150,78,144,138,74,257,	0,383,601,932,1260,1621,1925,2525,3020,3307,3653,3947,4255,
#Deleted in new
chr6_GL000256v2_alt	3057456	3061968	chr6_GL000256v2_alt:3057456-3061968	0	+	3057456	3061823	789624	13	129,73,110,81,88,190,127,150,75,144,138,74,257,	0,383,601,932,1260,1621,1925,2525,3023,3307,3653,3947,4255,
#Deleted in new
chr6_GL000256v2_alt	3057456	3061968	chr6_GL000256v2_alt:3057456-3061968	0	+	3057456	3061823	789624	13	129,73,110,81,88,190,127,150,78,144,48,74,257,	0,383,601,932,1260,1621,1925,2525,3020,3307,3653,3947,4255,
#Deleted in new
chr6_GL000256v2_alt	3057456	3058426	chr6_GL000256v2_alt:3057456-3058426	0	+	3057456	3058072	789624	3	129,110,38,	0,601,932,
#Deleted in new
chr6_GL000256v2_alt	3057456	3064143	chr6_GL000256v2_alt:3057456-3064143	3	+	3057456	3061823	789624	17	129,73,110,81,88,190,127,150,75,144,138,74,749,141,96,90,416,	0,383,601,932,1260,1621,1925,2525,3023,3307,3653,3947,4255,5250,5899,6101,6271,
#Deleted in new
chr6_GL000256v2_alt	3057486	3058794	chr6_GL000256v2_alt:3057486-3058794	0	+	3057486	3057486	8553170	4	99,73,110,406,	0,353,571,902,
#Deleted in new
chr6_GL000256v2_alt	3058736	3064143	chr6_GL000256v2_alt:3058736-3064143	0	+	3058736	3061080	789624	14	68,190,127,150,75,144,116,74,151,379,141,96,90,416,	0,341,645,1245,1743,2027,2305,2667,2975,3345,3970,4619,4821,4991,
#Deleted in new
chr6_GL000256v2_alt	3058736	3064137	chr6_GL000256v2_alt:3058736-3064137	3	+	3062346	3063823	8553170	13	68,190,127,150,75,144,116,74,151,379,141,96,410,	0,341,645,1245,1743,2027,2305,2667,2975,3345,3970,4619,4991,
#Deleted in new
chr6_GL000256v2_alt	3059208	3061968	chr6_GL000256v2_alt:3059208-3061968	0	+	3060498	3060857	789624	8	59,127,75,144,31,90,74,257,	0,173,1271,1555,1833,1949,2195,2503,
#Deleted in new
chr6_GL000256v2_alt	3060011	3062436	chr6_GL000256v2_alt:3060011-3062436	0	+	3060011	3060011	8553170	7	120,75,144,48,74,151,94,	0,468,752,1098,1392,1700,2331,
#Deleted in new
chr6_GL000256v2_alt	3060503	3061968	chr6_GL000256v2_alt:3060503-3061968	0	+	3060503	3061823	789624	5	51,144,90,74,257,	0,260,654,900,1208,
#Deleted in new
chr6_GL000256v2_alt	3061214	3061968	chr6_GL000256v2_alt:3061214-3061968	0	+	3061214	3061214	8553170	2	263,257,	0,497,
#Deleted in new
chr6_GL000256v2_alt	3061735	3064143	chr6_GL000256v2_alt:3061735-3064143	0	+	3061735	3061823	789624	4	127,141,96,586,	0,971,1620,1822,
#Deleted in new
chr6_GL000256v2_alt	3062090	3064143	chr6_GL000256v2_alt:3062090-3064143	3	+	3062346	3063823	789624	4	370,141,96,413,	0,616,1265,1640,
#Deleted in new
chr6_GL000256v2_alt	3062287	3064143	chr6_GL000256v2_alt:3062287-3064143	1	+	3062346	3063823	789624	5	173,141,96,90,416,	0,419,1068,1270,1440,
#Deleted in new
chr6_GL000256v2_alt	3062911	3063578	chr6_GL000256v2_alt:3062911-3063578	0	+	3062911	3062911	8553170	2	540,21,	0,646,
#Deleted in new
chr6_GL000256v2_alt	3064881	3076585	chr6_GL000256v2_alt:3064881-3076585	3	-	3064885	3076070	789624	17	181,175,140,302,93,153,133,186,117,113,170,196,111,97,279,249,186,	0,293,655,873,1568,1772,2032,3427,4084,4410,7363,7651,8925,9742,10373,10955,11518,
#Deleted in new
chr6_GL000256v2_alt	3065328	3066979	chr6_GL000256v2_alt:3065328-3066979	0	-	3065328	3065328	8553170	5	21,520,93,153,66,	0,208,1121,1325,1585,
#Deleted in new
chr6_GL000256v2_alt	3065580	3076563	chr6_GL000256v2_alt:3065580-3076563	0	-	3065580	3065580	8553170	15	96,302,93,153,133,186,117,113,170,80,111,97,79,249,164,	0,174,869,1073,1333,2728,3385,3711,6664,6952,8226,9043,9874,10256,10819,
#Deleted in new
chr6_GL000256v2_alt	3070561	3072298	chr6_GL000256v2_alt:3070561-3072298	0	-	3070561	3070561	8553170	2	554,54,	0,1683,
#Deleted in new
chr6_GL000256v2_alt	3075349	3076210	chr6_GL000256v2_alt:3075349-3076210	0	-	3075349	3075349	8553170	2	184,374,	0,487,
#Deleted in new
chr6_GL000256v2_alt	3076808	3094264	chr6_GL000256v2_alt:3076808-3094264	1	-	3076884	3094264	789624	29	145,326,112,207,156,128,79,69,105,126,71,106,91,159,104,125,91,95,109,120,82,165,128,101,85,125,139,135,143,	0,1449,1907,2090,2480,2923,3187,3352,3501,3963,4173,4329,4569,4767,5012,5203,5578,6697,6877,7078,7729,8052,14092,14353,14699,14874,15239,15468,17313,
#Deleted in new
chr6_GL000256v2_alt	3078107	3078196	chr6_GL000256v2_alt:3078107-3078196	3	-	3078107	3078107	8553170	1	89,	0,
#Deleted in new
chr6_GL000256v2_alt	3079745	3081880	chr6_GL000256v2_alt:3079745-3081880	0	-	3079745	3081880	789624	10	114,79,69,105,126,71,106,91,42,60,	0,250,415,564,1026,1236,1392,1632,1947,2075,
#Deleted in new
chr6_GL000256v2_alt	3079841	3081485	chr6_GL000256v2_alt:3079841-3081485	0	-	3079841	3079841	8553170	8	18,79,69,105,126,71,106,154,	0,154,319,468,930,1140,1296,1490,
#Deleted in new
chr6_GL000256v2_alt	3080167	3081216	chr6_GL000256v2_alt:3080167-3081216	0	-	3080167	3080167	8553170	3	62,105,445,	0,142,604,
#Deleted in new
chr6_GL000256v2_alt	3080168	3081041	chr6_GL000256v2_alt:3080168-3081041	0	-	3080168	3080168	8553170	2	61,732,	0,141,
#Deleted in new
chr6_GL000256v2_alt	3080648	3081711	chr6_GL000256v2_alt:3080648-3081711	0	-	3080648	3080648	8553170	3	249,262,334,	0,333,729,
#Deleted in new
chr6_GL000256v2_alt	3080983	3082530	chr6_GL000256v2_alt:3080983-3082530	0	-	3080983	3080983	8553170	6	69,106,91,159,316,144,	0,154,394,592,837,1403,
#Deleted in new
chr6_GL000256v2_alt	3080990	3081720	chr6_GL000256v2_alt:3080990-3081720	0	-	3080990	3080990	8553170	4	62,106,137,145,	0,147,341,585,
#Deleted in new
chr6_GL000256v2_alt	3081702	3083727	chr6_GL000256v2_alt:3081702-3083727	2	-	3081702	3081702	8553170	4	434,91,95,42,	0,684,1803,1983,
#Deleted in new
chr6_GL000256v2_alt	3083889	3092251	chr6_GL000256v2_alt:3083889-3092251	0	-	3083889	3083889	8553170	8	117,82,165,128,101,85,125,204,	0,648,971,7011,7272,7618,7793,8158,
#Deleted in new
chr6_GL000256v2_alt	3084537	3091569	chr6_GL000256v2_alt:3084537-3091569	0	-	3084537	3084537	8553170	5	82,165,128,221,62,	0,323,6363,6624,6970,
#Deleted in new
chr6_GL000256v2_alt	3092276	3094270	chr6_GL000256v2_alt:3092276-3094270	0	-	3092276	3094270	789624	2	135,149,	0,1845,
#Deleted in new
chr6_GL000256v2_alt	3158885	3164023	chr6_GL000256v2_alt:3158885-3164023	0	-	3158885	3158885	8553170	3	2287,2150,179,	0,2383,4959,
#Deleted in new
chr6_GL000256v2_alt	3160278	3164159	chr6_GL000256v2_alt:3160278-3164159	3	-	3160945	3164003	789624	6	894,223,183,263,193,315,	0,990,1387,2136,2947,3566,
#Deleted in new
chr6_GL000256v2_alt	3160278	3164043	chr6_GL000256v2_alt:3160278-3164043	0	-	3162617	3164003	789624	5	894,223,183,263,199,	0,990,1387,2136,3566,
#Deleted in new
chr6_GL000256v2_alt	3160278	3164049	chr6_GL000256v2_alt:3160278-3164049	0	-	3161399	3164003	789624	6	894,137,183,263,193,205,	0,990,1387,2136,2947,3566,
#Deleted in new
chr6_GL000256v2_alt	3160278	3164032	chr6_GL000256v2_alt:3160278-3164032	0	-	3160278	3160278	8553170	4	1570,263,193,188,	0,2136,2947,3566,
#Deleted in new
chr6_GL000256v2_alt	3161268	3163246	chr6_GL000256v2_alt:3161268-3163246	0	-	3161268	3161268	8553170	3	223,183,832,	0,397,1146,
#Deleted in new
chr6_GL000256v2_alt	3164418	3180223	chr6_GL000256v2_alt:3164418-3180223	1	-	3164853	3180202	789624	21	557,85,95,71,74,104,95,254,103,93,100,236,84,88,61,126,100,79,74,49,61,	0,1460,1624,1818,2123,2306,2498,2681,5959,6349,7405,7614,8116,8276,11263,11524,11732,12655,12859,13837,15744,
#Deleted in new
chr6_GL000256v2_alt	3164421	3180268	chr6_GL000256v2_alt:3164421-3180268	3	-	3164853	3180202	789624	20	554,85,95,71,74,104,95,254,103,93,100,236,84,88,61,100,79,74,49,106,	0,1457,1621,1815,2120,2303,2495,2678,5956,6346,7402,7611,8113,8273,11260,11729,12652,12856,13834,15741,
#Deleted in new
chr6_GL000256v2_alt	3164421	3178893	chr6_GL000256v2_alt:3164421-3178893	1	-	3164853	3177087	789624	21	554,85,95,71,74,104,95,254,103,93,100,236,84,88,61,126,100,79,74,49,109,	0,1457,1621,1815,2120,2303,2495,2678,5956,6346,7402,7611,8113,8273,11260,11521,11729,12652,12856,13834,14363,
#Deleted in new
chr6_GL000256v2_alt	3164803	3165907	chr6_GL000256v2_alt:3164803-3165907	0	-	3164803	3164803	8553170	2	172,220,	0,884,
#Deleted in new
chr6_GL000256v2_alt	3166916	3180189	chr6_GL000256v2_alt:3166916-3180189	0	-	3166916	3180189	789624	13	95,254,103,93,84,88,61,126,100,79,74,49,27,	0,183,3461,3851,5618,5778,8765,9026,9234,10157,10361,11339,13246,
#Deleted in new
chr6_GL000256v2_alt	3167285	3172423	chr6_GL000256v2_alt:3167285-3172423	0	-	3167285	3167285	8553170	4	68,103,93,391,	0,3092,3482,4747,
#Deleted in new
chr6_GL000256v2_alt	3170818	3172465	chr6_GL000256v2_alt:3170818-3172465	0	-	3170818	3170818	8553170	3	42,100,433,	0,1005,1214,
#Deleted in new
chr6_GL000256v2_alt	3175746	3180219	chr6_GL000256v2_alt:3175746-3180219	0	-	3175746	3175746	8553170	6	322,100,79,74,49,57,	0,404,1327,1531,2509,4416,
#Deleted in new
chr6_GL000256v2_alt	3176043	3180219	chr6_GL000256v2_alt:3176043-3180219	0	-	3176043	3176043	8553170	6	25,100,121,74,49,57,	0,107,988,1234,2212,4119,
#Deleted in new
chr6_GL000256v2_alt	3180980	3190824	chr6_GL000256v2_alt:3180980-3190824	1	-	3181305	3190824	789624	21	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,102,115,135,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9210,9469,9709,
#Deleted in new
chr6_GL000256v2_alt	3180980	3190824	chr6_GL000256v2_alt:3180980-3190824	0	-	3181305	3190824	789624	20	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,115,135,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9469,9709,
#Deleted in new
chr6_GL000256v2_alt	3180980	3186363	chr6_GL000256v2_alt:3180980-3186363	0	-	3180980	3180980	8553170	9	506,176,79,87,116,78,145,408,230,	0,914,1255,2940,3135,3603,4047,4633,5153,
#Deleted in new
chr6_GL000256v2_alt	3180980	3186028	chr6_GL000256v2_alt:3180980-3186028	0	-	3180980	3180980	8553170	9	506,176,79,87,116,78,145,168,162,	0,914,1255,2940,3135,3603,4047,4633,4886,
#Deleted in new
chr6_GL000256v2_alt	3180980	3187659	chr6_GL000256v2_alt:3180980-3187659	0	-	3180980	3180980	8553170	10	506,176,79,87,116,78,145,168,155,1526,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,
#Deleted in new
chr6_GL000256v2_alt	3180980	3190824	chr6_GL000256v2_alt:3180980-3190824	0	-	3180980	3180980	8553170	21	506,176,79,87,116,78,145,168,155,126,102,123,107,83,183,236,144,149,102,115,135,	0,914,1255,2940,3135,3603,4047,4633,4886,5132,6822,7016,7236,7818,8020,8282,8604,8840,9210,9469,9709,
#Deleted in new
chr6_GL000256v2_alt	3180980	3190824	chr6_GL000256v2_alt:3180980-3190824	0	-	3181305	3190824	789624	21	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,102,115,135,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9210,9469,9709,
#Deleted in new
chr6_GL000256v2_alt	3180980	3190824	chr6_GL000256v2_alt:3180980-3190824	2	-	3181305	3190824	789624	20	506,176,79,87,116,78,145,168,155,105,102,123,107,83,183,236,144,149,115,135,	0,914,1255,2940,3135,3603,4047,4633,4886,5153,6822,7016,7236,7818,8020,8282,8604,8840,9469,9709,
#Deleted in new
chr6_GL000256v2_alt	3184982	3185276	chr6_GL000256v2_alt:3184982-3185276	3	+	3184982	3184982	8553170	2	51,172,	0,122,
#Deleted in new
chr6_GL000256v2_alt	3185040	3188286	chr6_GL000256v2_alt:3185040-3188286	0	-	3185040	3188286	789624	7	132,168,155,144,102,123,70,	0,573,826,1093,2762,2956,3176,
#Deleted in new
chr6_GL000256v2_alt	3185894	3188341	chr6_GL000256v2_alt:3185894-3188341	0	-	3185894	3185894	8553170	4	127,105,102,345,	0,239,1908,2102,
#Deleted in new
chr6_GL000256v2_alt	3221178	3238647	chr6_GL000256v2_alt:3221178-3238647	0	+	3221178	3221178	8553170	6	86,174,99,134,139,141,	0,13620,13877,14176,15933,17328,
#Deleted in new
chr6_GL000256v2_alt	3221221	3230133	chr6_GL000256v2_alt:3221221-3230133	0	+	3228991	3230133	789624	4	43,145,210,163,	0,7671,7972,8749,
#Deleted in new
chr6_GL000256v2_alt	3221333	3237179	chr6_GL000256v2_alt:3221333-3237179	0	+	3221333	3221333	8553170	5	67,174,99,134,68,	0,13465,13722,14021,15778,
#Deleted in new
chr6_GL000256v2_alt	3228715	3246863	chr6_GL000256v2_alt:3228715-3246863	1	+	3234861	3246546	789624	16	322,210,186,174,139,141,90,141,95,112,166,77,92,127,50,497,	0,478,1255,6083,8396,9791,11703,15432,15698,15889,16117,16390,16608,17200,17453,17651,
#Deleted in new
chr6_GL000256v2_alt	3228715	3246863	chr6_GL000256v2_alt:3228715-3246863	1	+	3228991	3246546	0	16	322,174,99,134,139,141,90,141,95,112,166,77,92,127,50,497,	0,6083,6340,6639,8396,9791,11703,15432,15698,15889,16117,16390,16608,17200,17453,17651,
#Deleted in new
chr6_GL000256v2_alt	3228715	3246863	chr6_GL000256v2_alt:3228715-3246863	3	+	3229262	3246546	789624	18	322,238,186,174,99,134,139,141,90,141,95,112,166,77,92,127,50,497,	0,478,1255,6083,6340,6639,8396,9791,11703,15432,15698,15889,16117,16390,16608,17200,17453,17651,
#Deleted in new
chr6_GL000256v2_alt	3228730	3246861	chr6_GL000256v2_alt:3228730-3246861	1	+	3228991	3246546	0	18	307,210,186,174,99,134,139,141,90,141,95,112,166,77,92,127,50,495,	0,463,1240,6068,6325,6624,8381,9776,11688,15417,15683,15874,16102,16375,16593,17185,17438,17636,
#Deleted in new
chr6_GL000256v2_alt	3228763	3234919	chr6_GL000256v2_alt:3228763-3234919	0	+	3228991	3234919	789624	3	274,210,121,	0,430,6035,
#Deleted in new
chr6_GL000256v2_alt	3228769	3244508	chr6_GL000256v2_alt:3228769-3244508	0	+	3228991	3244508	789624	9	268,174,99,134,139,141,90,141,95,	0,6029,6286,6585,8342,9737,11649,15378,15644,
#Deleted in new
chr6_GL000256v2_alt	3228941	3236247	chr6_GL000256v2_alt:3228941-3236247	0	+	3228941	3228941	8553170	6	96,210,186,174,99,893,	0,252,1029,5857,6114,6413,
#Deleted in new
chr6_GL000256v2_alt	3229001	3246861	chr6_GL000256v2_alt:3229001-3246861	1	+	3229003	3246546	789624	14	36,174,99,141,90,141,95,112,166,77,92,127,50,495,	0,5797,6054,9505,11417,15146,15412,15603,15831,16104,16322,16914,17167,17365,
#Deleted in new
chr6_GL000256v2_alt	3233536	3235471	chr6_GL000256v2_alt:3233536-3235471	0	+	3233536	3233536	8553170	4	146,174,99,117,	0,1262,1519,1818,
#Deleted in new
chr6_GL000256v2_alt	3234798	3235484	chr6_GL000256v2_alt:3234798-3235484	0	+	3234798	3235484	789624	3	174,99,130,	0,257,556,
#Deleted in new
chr6_GL000256v2_alt	3234798	3240439	chr6_GL000256v2_alt:3234798-3240439	0	+	3234798	3240439	789624	4	174,99,141,21,	0,257,3708,5620,
#Deleted in new
chr6_GL000256v2_alt	3234798	3246861	chr6_GL000256v2_alt:3234798-3246861	0	+	3234798	3234798	8553170	14	174,99,139,141,90,141,95,112,166,77,92,127,54,495,	0,257,2313,3708,5620,9349,9615,9806,10034,10307,10525,11117,11366,11568,
#Deleted in new
chr6_GL000256v2_alt	3235471	3244947	chr6_GL000256v2_alt:3235471-3244947	0	+	3235471	3235471	8553170	8	17,139,141,90,185,95,112,115,	0,1640,3035,4947,8632,8942,9133,9361,
#Deleted in new
chr6_GL000256v2_alt	3235637	3242912	chr6_GL000256v2_alt:3235637-3242912	3	-	3235637	3235637	789624	3	184,63,540,	0,891,6735,
#Deleted in new
chr6_GL000256v2_alt	3237243	3246861	chr6_GL000256v2_alt:3237243-3246861	0	+	3237243	3237243	8553170	10	1404,90,141,95,112,166,77,92,127,495,	0,3175,6904,7170,7361,7589,7862,8080,8672,9123,
#Deleted in new
chr6_GL000256v2_alt	3244861	3246861	chr6_GL000256v2_alt:3244861-3246861	0	+	3244861	3244861	8553170	6	137,77,92,127,50,211,	0,244,462,1054,1307,1789,
#Deleted in new
chr6_GL000256v2_alt	3246838	3253273	chr6_GL000256v2_alt:3246838-3253273	3	+	3247410	3253219	0	19	51,166,234,186,174,102,137,139,132,102,138,98,118,154,77,101,133,50,210,	0,470,723,1357,1698,2092,2295,2724,3180,3593,3770,4400,4636,4969,5218,5494,5691,5905,6225,
#Deleted in new
chr6_GL000256v2_alt	3247182	3253273	chr6_GL000256v2_alt:3247182-3253273	1	+	3247410	3253219	0	18	292,234,186,174,102,137,139,132,102,138,98,118,154,77,101,133,50,210,	0,379,1013,1354,1748,1951,2380,2836,3249,3426,4056,4292,4625,4874,5150,5347,5561,5881,
#Deleted in new
chr6_GL000256v2_alt	3247285	3248057	chr6_GL000256v2_alt:3247285-3248057	0	+	3247285	3247285	8553170	2	189,496,	0,276,
#Deleted in new
chr6_GL000256v2_alt	3247314	3249032	chr6_GL000256v2_alt:3247314-3249032	0	+	3247314	3247314	8553170	5	160,121,186,174,102,	0,360,881,1222,1616,
#Deleted in new
chr6_GL000256v2_alt	3247410	3251834	chr6_GL000256v2_alt:3247410-3251834	0	+	3247410	3247410	8553170	12	64,234,186,174,102,137,139,132,102,138,98,360,	0,151,785,1126,1520,1723,2152,2608,3021,3198,3828,4064,
#Deleted in new
chr6_GL000256v2_alt	3248469	3250740	chr6_GL000256v2_alt:3248469-3250740	0	+	3248469	3248469	8553170	6	241,102,568,132,102,132,	0,461,664,1549,1962,2139,
#Deleted in new
chr6_GL000256v2_alt	3248985	3250787	chr6_GL000256v2_alt:3248985-3250787	0	+	3248985	3248985	8553170	6	47,137,139,132,102,179,	0,148,577,1033,1446,1623,
#Deleted in new
chr6_GL000256v2_alt	3249546	3250787	chr6_GL000256v2_alt:3249546-3250787	0	+	3249546	3249546	8553170	4	155,132,102,179,	0,472,885,1062,
#Deleted in new
chr6_GL000256v2_alt	3250186	3250787	chr6_GL000256v2_alt:3250186-3250787	0	+	3250186	3250186	8553170	2	347,179,	0,422,
#Deleted in new
chr6_GL000256v2_alt	3250919	3252433	chr6_GL000256v2_alt:3250919-3252433	0	+	3250919	3250919	8553170	4	417,487,77,101,	0,555,1137,1413,
#Deleted in new
chr6_GL000256v2_alt	3252062	3253273	chr6_GL000256v2_alt:3252062-3253273	0	+	3252062	3252062	8553170	4	371,133,50,210,	0,467,681,1001,
#Deleted in new
chr6_GL000256v2_alt	3252603	3253273	chr6_GL000256v2_alt:3252603-3253273	0	+	3252603	3252603	8553170	2	59,530,	0,140,
#Deleted in new
chr6_GL000256v2_alt	3253275	3260281	chr6_GL000256v2_alt:3253275-3260281	1	-	3253489	3259635	0	11	312,103,55,145,338,38,75,146,70,83,201,	0,1642,1993,2211,2468,2972,3132,4606,4854,6285,6805,
#Deleted in new
chr6_GL000256v2_alt	3253416	3260108	chr6_GL000256v2_alt:3253416-3260108	0	-	3253416	3253416	8553170	9	171,103,55,145,542,75,146,70,548,	0,1501,1852,2070,2327,2991,4465,4713,6144,
#Deleted in new
chr6_GL000256v2_alt	3253416	3260133	chr6_GL000256v2_alt:3253416-3260133	0	-	3253416	3253416	8553170	10	171,406,145,338,38,75,146,70,83,53,	0,1501,2070,2327,2831,2991,4465,4713,6144,6664,
#Deleted in new
chr6_GL000256v2_alt	3254946	3260146	chr6_GL000256v2_alt:3254946-3260146	0	-	3254946	3259635	789624	10	74,55,145,323,38,75,146,70,83,66,	0,322,540,797,1301,1461,2935,3183,4614,5134,
#Deleted in new
chr6_GL000256v2_alt	3255492	3259668	chr6_GL000256v2_alt:3255492-3259668	2	-	3255492	3259635	789624	7	139,338,38,75,146,70,108,	0,251,755,915,2389,2637,4068,
#Deleted in new
chr6_GL000256v2_alt	3255748	3259760	chr6_GL000256v2_alt:3255748-3259760	0	-	3255748	3259635	789624	6	318,38,75,146,70,200,	0,499,659,2133,2381,3812,
#Deleted in new
chr6_GL000256v2_alt	3255938	3260227	chr6_GL000256v2_alt:3255938-3260227	0	-	3255938	3255938	8553170	6	347,75,146,70,83,147,	0,469,1943,2191,3622,4142,
#Deleted in new
chr6_GL000256v2_alt	3255961	3260157	chr6_GL000256v2_alt:3255961-3260157	0	-	3255961	3255961	8553170	7	30,38,75,146,70,147,77,	0,286,446,1920,2168,3535,4119,
#Deleted in new
chr6_GL000256v2_alt	3256008	3260048	chr6_GL000256v2_alt:3256008-3260048	0	-	3256008	3259635	789624	7	73,38,75,146,70,83,280,	0,239,399,1873,2121,3552,3760,
#Deleted in new
chr6_GL000256v2_alt	3256253	3260154	chr6_GL000256v2_alt:3256253-3260154	0	-	3256253	3256253	8553170	5	32,75,318,83,74,	0,154,1628,3307,3827,
#Deleted in new
chr6_GL000256v2_alt	3256407	3260143	chr6_GL000256v2_alt:3256407-3260143	0	-	3256407	3256407	8553170	6	75,146,70,118,83,63,	0,1474,1722,2099,3153,3673,
#Deleted in new
chr6_GL000256v2_alt	3258588	3259635	chr6_GL000256v2_alt:3258588-3259635	1	-	3258588	3259635	789624	2	36,75,	0,972,
#Deleted in new
chr6_GL000256v2_alt	3260268	3270940	chr6_GL000256v2_alt:3260268-3270940	3	+	3260381	3270904	789624	28	135,104,110,118,115,75,54,191,129,146,147,85,107,147,97,213,111,231,138,138,105,148,127,211,111,219,141,237,	0,217,930,1140,1352,1586,1961,2116,2467,2829,3359,3634,3905,4333,4557,4833,5152,6703,7629,7924,8193,8635,8876,9248,9606,9791,10200,10435,
#Deleted in new
chr6_GL000256v2_alt	3260305	3262575	chr6_GL000256v2_alt:3260305-3262575	0	+	3260305	3260305	8553170	8	98,104,110,118,115,75,54,46,	0,180,893,1103,1315,1549,1924,2224,
#Deleted in new
chr6_GL000256v2_alt	3260327	3263772	chr6_GL000256v2_alt:3260327-3263772	0	+	3260327	3260327	8553170	5	76,46,129,146,145,	0,2202,2408,2770,3300,
#Deleted in new
chr6_GL000256v2_alt	3260336	3270940	chr6_GL000256v2_alt:3260336-3270940	0	+	3260336	3260336	8553170	23	67,104,110,118,115,75,635,146,147,378,147,97,213,111,231,138,138,105,148,127,211,467,472,	0,149,862,1072,1284,1518,1893,2761,3291,3566,4265,4489,4765,5084,6635,7561,7856,8125,8567,8808,9180,9475,10132,
#Deleted in new
chr6_GL000256v2_alt	3260379	3261147	chr6_GL000256v2_alt:3260379-3261147	0	+	3260379	3260379	8553170	2	24,662,	0,106,
#Deleted in new
chr6_GL000256v2_alt	3260381	3262414	chr6_GL000256v2_alt:3260381-3262414	1	+	3260381	3262414	789624	4	22,104,54,30,	0,104,1848,2003,
#Deleted in new
chr6_GL000256v2_alt	3262685	3264199	chr6_GL000256v2_alt:3262685-3264199	0	+	3262685	3262685	8553170	5	179,146,147,85,26,	0,412,942,1217,1488,
#Deleted in new
chr6_GL000256v2_alt	3268016	3269633	chr6_GL000256v2_alt:3268016-3269633	0	+	3268016	3268016	8553170	6	19,138,105,148,168,113,	0,176,445,887,1128,1504,
#Deleted in new
chr6_GL000256v2_alt	3268209	3269637	chr6_GL000256v2_alt:3268209-3269637	0	+	3268209	3268209	8553170	4	121,105,148,493,	0,252,694,935,
#Deleted in new
chr6_GL000256v2_alt	3268291	3270175	chr6_GL000256v2_alt:3268291-3270175	0	+	3268291	3268291	8553170	6	39,105,148,127,211,301,	0,170,612,853,1225,1583,
#Deleted in new
chr6_GL000256v2_alt	3269511	3270940	chr6_GL000256v2_alt:3269511-3270940	0	+	3269511	3269511	8553170	4	139,189,141,237,	0,578,957,1192,
#Deleted in new
chr6_GL000256v2_alt	3269642	3270597	chr6_GL000256v2_alt:3269642-3270597	0	+	3269642	3269642	8553170	3	85,111,538,	0,232,417,
#Deleted in new
chr6_GL000256v2_alt	3269663	3270940	chr6_GL000256v2_alt:3269663-3270940	0	+	3269663	3269663	8553170	4	64,111,219,472,	0,211,396,805,
#Deleted in new
chr6_GL000256v2_alt	3269668	3270940	chr6_GL000256v2_alt:3269668-3270940	0	+	3269668	3269668	8553170	4	59,174,219,472,	0,143,391,800,
#Deleted in new
chr6_GL000256v2_alt	3269874	3270940	chr6_GL000256v2_alt:3269874-3270940	0	+	3269874	3269874	8553170	4	111,219,37,237,	0,185,594,829,
#Deleted in new
chr6_GL000256v2_alt	3270998	3273481	chr6_GL000256v2_alt:3270998-3273481	3	-	3271065	3272864	789624	7	215,95,136,220,236,362,364,	0,299,533,796,1102,1510,2119,
#Deleted in new
chr6_GL000256v2_alt	3270998	3273160	chr6_GL000256v2_alt:3270998-3273160	1	-	3271065	3272864	789624	6	215,95,136,220,236,652,	0,299,533,796,1102,1510,
#Deleted in new
chr6_GL000256v2_alt	3270998	3273325	chr6_GL000256v2_alt:3270998-3273325	1	-	3271065	3272864	789624	7	215,95,136,220,236,406,208,	0,299,533,796,1102,1510,2119,
#Deleted in new
chr6_GL000256v2_alt	3270998	3272874	chr6_GL000256v2_alt:3270998-3272874	0	-	3270998	3270998	8553170	5	215,95,483,236,366,	0,299,533,1102,1510,
#Deleted in new
chr6_GL000256v2_alt	3270998	3273284	chr6_GL000256v2_alt:3270998-3273284	0	-	3270998	3270998	8553170	3	215,1039,776,	0,299,1510,
#Deleted in new
chr6_GL000256v2_alt	3270998	3272046	chr6_GL000256v2_alt:3270998-3272046	0	-	3270998	3270998	8553170	4	215,95,36,265,	0,299,533,783,
#Deleted in new
chr6_GL000256v2_alt	3270998	3273441	chr6_GL000256v2_alt:3270998-3273441	0	-	3270998	3270998	8553170	4	215,95,136,1647,	0,299,533,796,
#Deleted in new
chr6_GL000256v2_alt	3270998	3273398	chr6_GL000256v2_alt:3270998-3273398	0	-	3270998	3270998	8553170	5	215,95,136,542,890,	0,299,533,796,1510,
#Deleted in new
chr6_GL000256v2_alt	3270998	3273427	chr6_GL000256v2_alt:3270998-3273427	0	-	3270998	3270998	8553170	6	215,95,136,147,236,310,	0,299,533,796,1102,2119,
#Deleted in new
chr6_GL000256v2_alt	3270998	3272872	chr6_GL000256v2_alt:3270998-3272872	0	-	3270998	3270998	8553170	2	1338,364,	0,1510,
#Deleted in new
chr6_GL000256v2_alt	3271572	3273325	chr6_GL000256v2_alt:3271572-3273325	0	-	3271572	3271572	8553170	5	95,147,236,406,208,	0,222,528,936,1545,
#Deleted in new
chr6_GL000256v2_alt	3271799	3273287	chr6_GL000256v2_alt:3271799-3273287	0	-	3271799	3271799	8553170	4	142,228,262,170,	0,301,709,1318,
#Deleted in new
chr6_GL000256v2_alt	3271831	3273178	chr6_GL000256v2_alt:3271831-3273178	0	-	3271831	3271831	8553170	3	110,236,670,	0,269,677,
#Deleted in new
chr6_GL000256v2_alt	3272090	3273198	chr6_GL000256v2_alt:3272090-3273198	0	-	3272090	3272090	8553170	3	246,406,81,	0,418,1027,
#Deleted in new
chr6_GL000256v2_alt	3272363	3280199	chr6_GL000256v2_alt:3272363-3280199	0	+	3272363	3272363	8553170	4	100,643,137,108,	0,694,1446,7728,
#Deleted in new
chr6_GL000256v2_alt	3272363	3282634	chr6_GL000256v2_alt:3272363-3282634	3	+	3273399	3282238	789624	8	100,643,137,96,140,98,148,442,	0,694,1446,7728,8239,9276,9479,9829,
#Deleted in new
chr6_GL000256v2_alt	3273057	3282635	chr6_GL000256v2_alt:3273057-3282635	1	+	3273185	3282238	789624	8	348,210,137,96,140,98,148,443,	0,433,752,7034,7545,8582,8785,9135,
#Deleted in new
chr6_GL000256v2_alt	3273132	3282635	chr6_GL000256v2_alt:3273132-3282635	1	+	3273185	3282238	789624	8	273,210,137,108,140,98,148,443,	0,358,677,6959,7470,8507,8710,9060,
#Deleted in new
chr6_GL000256v2_alt	3273528	3282635	chr6_GL000256v2_alt:3273528-3282635	0	+	3273528	3273528	8553170	6	172,137,96,1135,148,443,	0,281,6563,7074,8314,8664,
#Deleted in new
chr6_GL000256v2_alt	3273541	3282635	chr6_GL000256v2_alt:3273541-3282635	0	+	3273541	3273541	8553170	3	159,80,443,	0,8369,8651,
#Deleted in new
chr6_GL000256v2_alt	3273576	3282635	chr6_GL000256v2_alt:3273576-3282635	0	+	3273576	3273576	8553170	6	124,96,140,98,148,443,	0,6515,7026,8063,8266,8616,
#Deleted in new
chr6_GL000256v2_alt	3273579	3274607	chr6_GL000256v2_alt:3273579-3274607	0	+	3273579	3273579	8553170	2	121,798,	0,230,
#Deleted in new
chr6_GL000256v2_alt	3273743	3282635	chr6_GL000256v2_alt:3273743-3282635	0	+	3273743	3273743	8553170	6	203,96,140,98,148,443,	0,6348,6859,7896,8099,8449,
#Deleted in new
chr6_GL000256v2_alt	3273766	3281051	chr6_GL000256v2_alt:3273766-3281051	0	+	3273766	3273766	8553170	3	180,96,449,	0,6325,6836,
#Deleted in new
chr6_GL000256v2_alt	3273770	3281990	chr6_GL000256v2_alt:3273770-3281990	0	+	3273770	3273770	8553170	5	338,96,140,98,148,	0,6321,6832,7869,8072,
#Deleted in new
chr6_GL000256v2_alt	3281579	3282635	chr6_GL000256v2_alt:3281579-3282635	0	+	3281579	3281579	8553170	2	411,443,	0,613,
#Deleted in new
chr6_GL000256v2_alt	3283212	3303870	chr6_GL000256v2_alt:3283212-3303870	3	+	3283296	3303729	0	41	149,199,202,71,89,83,97,106,133,116,180,183,186,159,127,75,198,112,71,140,210,52,90,210,76,157,117,172,233,168,60,94,187,91,75,103,90,99,84,133,283,	0,281,694,1105,1254,1561,1814,2049,2252,9168,9383,9708,10023,10362,10772,11066,11401,11690,11892,12221,12474,12928,13081,13306,13695,13931,14183,14405,14805,15120,15681,16790,16981,17282,17463,19029,19297,19472,19753,20099,20375,
#Deleted in new
chr6_GL000256v2_alt	3283245	3303729	chr6_GL000256v2_alt:3283245-3303729	1	+	3283296	3303729	789624	40	116,199,202,71,89,83,97,106,133,116,180,183,186,159,127,75,198,112,71,140,210,52,90,210,76,157,117,172,233,168,60,94,140,75,103,90,99,84,133,142,	0,248,661,1072,1221,1528,1781,2016,2219,9135,9350,9675,9990,10329,10739,11033,11368,11657,11859,12188,12441,12895,13048,13273,13662,13898,14150,14372,14772,15087,15648,16757,16948,17430,18996,19264,19439,19720,20066,20342,
#Deleted in new
chr6_GL000256v2_alt	3284031	3284748	chr6_GL000256v2_alt:3284031-3284748	0	+	3284031	3284031	8553170	2	77,431,	0,286,
#Deleted in new
chr6_GL000256v2_alt	3284069	3285587	chr6_GL000256v2_alt:3284069-3285587	0	+	3284069	3284069	8553170	5	39,71,89,83,123,	0,248,397,704,1395,
#Deleted in new
chr6_GL000256v2_alt	3293365	3295165	chr6_GL000256v2_alt:3293365-3295165	0	+	3293365	3293365	8553170	6	56,159,127,75,198,263,	0,209,619,913,1248,1537,
#Deleted in new
chr6_GL000256v2_alt	3296297	3296809	chr6_GL000256v2_alt:3296297-3296809	0	+	3296297	3296297	8553170	2	86,291,	0,221,
#Deleted in new
chr6_GL000256v2_alt	3297139	3300025	chr6_GL000256v2_alt:3297139-3300025	0	+	3297139	3297139	8553170	7	161,117,172,173,168,60,23,	0,256,478,938,1193,1754,2863,
#Deleted in new
chr6_GL000256v2_alt	3298930	3300908	chr6_GL000256v2_alt:3298930-3300908	0	+	3298930	3298930	8553170	5	23,94,187,91,233,	0,1072,1263,1564,1745,
#Deleted in new
chr6_GL000256v2_alt	3300039	3300719	chr6_GL000256v2_alt:3300039-3300719	0	+	3300039	3300039	8553170	2	57,526,	0,154,
#Deleted in new
chr6_GL000256v2_alt	3300343	3303870	chr6_GL000256v2_alt:3300343-3303870	0	+	3300343	3300343	8553170	8	37,91,75,103,90,99,479,283,	0,151,332,1898,2166,2341,2622,3244,
#Deleted in new
chr6_GL000256v2_alt	3300388	3303870	chr6_GL000256v2_alt:3300388-3303870	0	+	3300388	3300388	8553170	8	197,75,103,90,99,84,133,283,	0,287,1853,2121,2296,2577,2923,3199,
#Deleted in new
chr6_GL000256v2_alt	3301164	3304710	chr6_GL000256v2_alt:3301164-3304710	3	-	3301164	3301164	8553170	2	1593,502,	0,3044,
#Deleted in new
chr6_GL000256v2_alt	3302186	3303870	chr6_GL000256v2_alt:3302186-3303870	0	+	3302186	3302186	8553170	6	158,90,99,84,133,283,	0,323,498,779,1125,1401,
#Deleted in new
chr6_GL000256v2_alt	3302315	3303454	chr6_GL000256v2_alt:3302315-3303454	0	+	3302315	3302315	8553170	2	29,945,	0,194,
#Deleted in new
chr6_GL000256v2_alt	3302448	3303057	chr6_GL000256v2_alt:3302448-3303057	0	+	3302448	3302448	8553170	2	151,373,	0,236,
#Deleted in new
chr6_GL000256v2_alt	3306824	3309639	chr6_GL000256v2_alt:3306824-3309639	7	+	3306824	3306824	16724991	8	877,102,102,87,202,179,104,317,	0,984,1174,1377,1633,2035,2297,2498,
#Deleted in new
chr6_GL000256v2_alt	3306877	3309588	chr6_GL000256v2_alt:3306877-3309588	5	+	3306877	3306877	16724991	10	202,90,147,102,102,87,202,179,104,266,	0,299,677,931,1121,1324,1580,1982,2244,2445,
#Deleted in new
chr6_GL000256v2_alt	3309802	3313661	chr6_GL000256v2_alt:3309802-3313661	7	-	3309802	3309802	16724991	13	102,164,162,97,152,133,131,144,120,53,123,336,321,	0,422,663,917,1107,1351,1603,1827,2089,2372,2539,2913,3538,
#Deleted in new
chr6_GL000256v2_alt	3314459	3314976	chr6_GL000256v2_alt:3314459-3314976	7	+	3314459	3314459	16724991	3	16,148,46,	0,121,471,
#Deleted in new
chr6_GL000256v2_alt	3315950	3336608	chr6_GL000256v2_alt:3315950-3336608	1	+	3316034	3336467	0	41	149,199,202,71,89,83,97,106,133,116,180,183,186,159,127,75,198,112,71,140,210,52,90,210,76,157,117,172,233,168,60,94,187,91,75,103,90,99,84,133,283,	0,281,694,1105,1254,1561,1814,2049,2252,9168,9383,9708,10023,10362,10772,11066,11401,11690,11892,12221,12474,12928,13081,13306,13695,13931,14183,14405,14805,15120,15681,16790,16981,17282,17463,19029,19297,19472,19753,20099,20375,
#Deleted in new
chr6_GL000256v2_alt	3316034	3336607	chr6_GL000256v2_alt:3316034-3336607	3	+	3316034	3336467	789624	40	65,199,202,71,89,83,97,106,133,116,180,183,186,159,127,75,198,112,71,140,210,52,90,210,76,157,117,172,233,168,60,94,140,75,103,90,99,84,133,282,	0,197,610,1021,1170,1477,1730,1965,2168,9084,9299,9624,9939,10278,10688,10982,11317,11606,11808,12137,12390,12844,12997,13222,13611,13847,14099,14321,14721,15036,15597,16706,16897,17379,18945,19213,19388,19669,20015,20291,
#Deleted in new
chr6_GL000256v2_alt	3316769	3317486	chr6_GL000256v2_alt:3316769-3317486	0	+	3316769	3316769	8553170	2	77,431,	0,286,
#Deleted in new
chr6_GL000256v2_alt	3316807	3318325	chr6_GL000256v2_alt:3316807-3318325	0	+	3316807	3316807	8553170	5	39,71,89,83,123,	0,248,397,704,1395,
#Deleted in new
chr6_GL000256v2_alt	3326103	3327903	chr6_GL000256v2_alt:3326103-3327903	0	+	3326103	3326103	8553170	6	56,159,127,75,198,263,	0,209,619,913,1248,1537,
#Deleted in new
chr6_GL000256v2_alt	3329035	3329547	chr6_GL000256v2_alt:3329035-3329547	0	+	3329035	3329035	8553170	2	86,291,	0,221,
#Deleted in new
chr6_GL000256v2_alt	3329881	3332763	chr6_GL000256v2_alt:3329881-3332763	0	+	3329881	3329881	8553170	7	157,117,172,173,168,60,23,	0,252,474,934,1189,1750,2859,
#Deleted in new
chr6_GL000256v2_alt	3331668	3333646	chr6_GL000256v2_alt:3331668-3333646	0	+	3331668	3331668	8553170	5	23,94,187,91,233,	0,1072,1263,1564,1745,
#Deleted in new
chr6_GL000256v2_alt	3332777	3333457	chr6_GL000256v2_alt:3332777-3333457	0	+	3332777	3332777	8553170	2	57,526,	0,154,
#Deleted in new
chr6_GL000256v2_alt	3333081	3336608	chr6_GL000256v2_alt:3333081-3336608	0	+	3333081	3333081	8553170	8	37,91,75,103,90,99,479,283,	0,151,332,1898,2166,2341,2622,3244,
#Deleted in new
chr6_GL000256v2_alt	3333126	3336608	chr6_GL000256v2_alt:3333126-3336608	0	+	3333126	3333126	8553170	8	197,75,103,90,99,84,133,283,	0,287,1853,2121,2296,2577,2923,3199,
#Deleted in new
chr6_GL000256v2_alt	3333918	3337448	chr6_GL000256v2_alt:3333918-3337448	3	-	3333918	3333918	8553170	2	1577,502,	0,3028,
#Deleted in new
chr6_GL000256v2_alt	3334924	3336608	chr6_GL000256v2_alt:3334924-3336608	0	+	3334924	3334924	8553170	6	158,90,99,84,133,283,	0,323,498,779,1125,1401,
#Deleted in new
chr6_GL000256v2_alt	3335053	3336192	chr6_GL000256v2_alt:3335053-3336192	0	+	3335053	3335053	8553170	2	29,945,	0,194,
#Deleted in new
chr6_GL000256v2_alt	3335186	3335795	chr6_GL000256v2_alt:3335186-3335795	0	+	3335186	3335186	8553170	2	151,373,	0,236,
#Deleted in new
chr6_GL000256v2_alt	3339487	3342825	chr6_GL000256v2_alt:3339487-3342825	3	+	3339612	3342321	0	10	324,90,155,102,102,87,201,179,104,770,	0,421,793,1055,1245,1448,1704,2105,2367,2568,
#Deleted in new
chr6_GL000256v2_alt	3339505	3340634	chr6_GL000256v2_alt:3339505-3340634	0	+	3339505	3339505	8553170	4	306,44,147,92,	0,403,783,1037,
#Deleted in new
chr6_GL000256v2_alt	3339554	3342829	chr6_GL000256v2_alt:3339554-3342829	0	+	3339554	3339554	8553170	8	444,155,102,102,87,179,104,774,	0,726,988,1178,1381,2038,2300,2501,
#Deleted in new
chr6_GL000256v2_alt	3339554	3342829	chr6_GL000256v2_alt:3339554-3342829	0	+	3339554	3339554	8553170	9	444,155,102,62,87,201,179,104,774,	0,726,988,1218,1381,1637,2038,2300,2501,
#Deleted in new
chr6_GL000256v2_alt	3339554	3342829	chr6_GL000256v2_alt:3339554-3342829	0	+	3339554	3339554	8553170	9	257,90,155,102,102,87,201,366,774,	0,354,726,988,1178,1381,1637,2038,2501,
#Deleted in new
chr6_GL000256v2_alt	3339559	3342829	chr6_GL000256v2_alt:3339559-3342829	0	+	3339559	3339559	8553170	9	439,174,102,102,87,201,179,104,774,	0,702,983,1173,1376,1632,2033,2295,2496,
#Deleted in new
chr6_GL000256v2_alt	3339604	3342857	chr6_GL000256v2_alt:3339604-3342857	1	+	3339612	3342321	789624	9	207,155,102,102,87,201,179,104,802,	0,676,938,1128,1331,1587,1988,2250,2451,
#Deleted in new
chr6_GL000256v2_alt	3339604	3340302	chr6_GL000256v2_alt:3339604-3340302	0	+	3339604	3339604	8553170	2	207,394,	0,304,
#Deleted in new
chr6_GL000256v2_alt	3339604	3340738	chr6_GL000256v2_alt:3339604-3340738	0	+	3339604	3339604	8553170	5	207,90,174,102,6,	0,304,657,938,1128,
#Deleted in new
chr6_GL000256v2_alt	3339604	3340670	chr6_GL000256v2_alt:3339604-3340670	0	+	3339604	3339604	8553170	4	207,90,155,128,	0,304,676,938,
#Deleted in new
chr6_GL000256v2_alt	3342341	3369188	chr6_GL000256v2_alt:3342341-3369188	0	-	3342535	3369188	789624	27	296,164,162,97,152,133,131,144,120,144,123,336,321,282,279,288,318,291,324,291,324,318,333,324,327,297,324,	0,616,857,1111,1300,1544,1796,2020,2282,2594,2852,3226,3851,5020,6579,7208,8115,8843,11515,12233,14696,15431,16903,20242,21002,23666,26523,
#Deleted in new
chr6_GL000256v2_alt	3342341	3347794	chr6_GL000256v2_alt:3342341-3347794	0	-	3342341	3342341	8553170	14	296,164,162,97,152,133,131,144,120,144,123,336,321,433,	0,616,857,1111,1300,1544,1796,2020,2282,2594,2852,3226,3851,5020,
#Deleted in new
chr6_GL000256v2_alt	3342341	3347315	chr6_GL000256v2_alt:3342341-3347315	0	-	3342341	3342341	8553170	13	296,164,162,97,152,133,131,144,120,144,123,336,1123,	0,616,857,1111,1300,1544,1796,2020,2282,2594,2852,3226,3851,
#Deleted in new
chr6_GL000256v2_alt	3342535	3348972	chr6_GL000256v2_alt:3342535-3348972	3	-	3342535	3345703	789624	15	102,164,162,97,152,133,131,144,120,144,123,336,321,282,52,	0,422,663,917,1106,1350,1602,1826,2088,2400,2658,3032,3657,4826,6385,
#Deleted in new
chr6_GL000256v2_alt	3343452	3344639	chr6_GL000256v2_alt:3343452-3344639	0	-	3343452	3343452	8553170	5	97,152,383,144,16,	0,189,433,909,1171,
#Deleted in new
chr6_GL000256v2_alt	3464562	3468156	chr6_GL000256v2_alt:3464562-3468156	3	-	3465425	3468031	789624	4	1040,186,539,144,	0,1178,2009,3450,
#Deleted in new
chr6_GL000256v2_alt	3464562	3469287	chr6_GL000256v2_alt:3464562-3469287	1	-	3465425	3468306	789624	6	1040,186,216,91,81,112,	0,1178,2009,3450,3736,4613,
#Deleted in new
chr6_GL000256v2_alt	3464562	3468141	chr6_GL000256v2_alt:3464562-3468141	0	-	3464562	3464562	8553170	3	1040,186,129,	0,1178,3450,
#Deleted in new
chr6_GL000256v2_alt	3464562	3466061	chr6_GL000256v2_alt:3464562-3466061	0	-	3464562	3464562	8553170	2	1040,321,	0,1178,
#Deleted in new
chr6_GL000256v2_alt	3464562	3468127	chr6_GL000256v2_alt:3464562-3468127	0	-	3464562	3464562	8553170	3	1040,186,1556,	0,1178,2009,
#Deleted in new
chr6_GL000256v2_alt	3466698	3470577	chr6_GL000256v2_alt:3466698-3470577	0	-	3466698	3468306	789624	5	89,91,81,100,136,	0,1314,1600,3242,3743,
#Deleted in new
chr6_GL000256v2_alt	3468184	3470164	chr6_GL000256v2_alt:3468184-3470164	0	-	3468184	3468184	8553170	3	195,201,224,	0,991,1756,
#Deleted in new
chr6_GL000256v2_alt	3469005	3470112	chr6_GL000256v2_alt:3469005-3470112	0	-	3469005	3469005	8553170	2	371,172,	0,935,
#Deleted in new
chr6_GL000256v2_alt	3469005	3470569	chr6_GL000256v2_alt:3469005-3470569	0	-	3469005	3469005	789624	3	371,100,77,	0,935,1487,
#Deleted in new
chr6_GL000256v2_alt	3469005	3470537	chr6_GL000256v2_alt:3469005-3470537	0	-	3469005	3469005	789624	3	371,100,96,	0,935,1436,
#Deleted in new
chr6_GL000256v2_alt	3469103	3479884	chr6_GL000256v2_alt:3469103-3479884	1	+	3470798	3479156	789624	9	737,191,154,96,108,84,85,55,872,	0,1687,2130,2788,2971,4738,4941,9670,9909,
#Deleted in new
chr6_GL000256v2_alt	3469543	3470543	chr6_GL000256v2_alt:3469543-3470543	0	-	3469543	3469543	789624	3	320,71,102,	0,426,898,
#Deleted in new
chr6_GL000256v2_alt	3469588	3470530	chr6_GL000256v2_alt:3469588-3470530	0	-	3469588	3469588	789624	3	275,71,158,	0,381,784,
#Deleted in new
chr6_GL000256v2_alt	3469644	3472182	chr6_GL000256v2_alt:3469644-3472182	0	+	3470798	3472182	789624	6	196,209,191,154,96,108,	0,755,1146,1589,2247,2430,
#Deleted in new
chr6_GL000256v2_alt	3469745	3474054	chr6_GL000256v2_alt:3469745-3474054	2	+	3470798	3472089	789624	6	95,191,96,108,84,10,	0,1045,2146,2329,4096,4299,
#Deleted in new
chr6_GL000256v2_alt	3469763	3479884	chr6_GL000256v2_alt:3469763-3479884	1	+	3470798	3479156	789624	10	77,406,191,154,96,108,84,85,55,872,	0,439,1027,1470,2128,2311,4078,4281,9010,9249,
#Deleted in new
chr6_GL000256v2_alt	3470048	3484484	chr6_GL000256v2_alt:3470048-3484484	0	+	3470048	3470048	8553170	16	560,191,154,96,108,84,85,55,79,483,110,96,171,80,154,368,	0,742,1185,1843,2026,3793,3996,8725,10736,12296,12859,13068,13245,13508,13661,14068,
#Deleted in new
chr6_GL000256v2_alt	3470048	3484488	chr6_GL000256v2_alt:3470048-3484488	0	+	3470798	3482406	0	16	560,191,154,96,108,84,85,55,79,483,110,96,171,80,154,372,	0,742,1185,1843,2026,3793,3996,8725,10736,12296,12859,13068,13245,13508,13661,14068,
#Deleted in new
chr6_GL000256v2_alt	3470202	3479886	chr6_GL000256v2_alt:3470202-3479886	1	+	3470798	3479156	789624	9	406,191,154,96,108,84,85,55,874,	0,588,1031,1689,1872,3639,3842,8571,8810,
#Deleted in new
chr6_GL000256v2_alt	3470221	3479884	chr6_GL000256v2_alt:3470221-3479884	1	+	3470798	3479156	789624	9	229,191,154,96,108,84,85,55,872,	0,569,1012,1670,1853,3620,3823,8552,8791,
#Deleted in new
chr6_GL000256v2_alt	3470273	3482439	chr6_GL000256v2_alt:3470273-3482439	0	+	3470798	3472089	789624	8	335,191,96,108,84,85,55,95,	0,517,1618,1801,3568,3771,8500,12071,
#Deleted in new
chr6_GL000256v2_alt	3470298	3479884	chr6_GL000256v2_alt:3470298-3479884	1	+	3470798	3479156	789624	9	300,191,154,96,108,84,85,55,872,	0,492,935,1593,1776,3543,3746,8475,8714,
#Deleted in new
chr6_GL000256v2_alt	3470370	3474129	chr6_GL000256v2_alt:3470370-3474129	0	+	3470798	3474129	789624	6	238,191,16,108,84,85,	0,420,1601,1704,3471,3674,
#Deleted in new
chr6_GL000256v2_alt	3470400	3478802	chr6_GL000256v2_alt:3470400-3478802	0	+	3470798	3472120	789624	7	208,191,154,16,108,84,29,	0,390,833,1571,1674,3441,8373,
#Deleted in new
chr6_GL000256v2_alt	3470425	3488185	chr6_GL000256v2_alt:3470425-3488185	0	+	3470798	3482406	0	21	183,191,154,96,108,84,85,55,79,95,123,110,96,155,80,154,627,209,98,1143,256,	0,365,808,1466,1649,3416,3619,8348,10359,11919,12279,12482,12691,12884,13131,13284,13691,15074,15689,16196,17504,
#Deleted in new
chr6_GL000256v2_alt	3470669	3473901	chr6_GL000256v2_alt:3470669-3473901	0	+	3470798	3473901	789624	5	312,154,96,108,60,	0,564,1222,1405,3172,
#Deleted in new
chr6_GL000256v2_alt	3471221	3471963	chr6_GL000256v2_alt:3471221-3471963	0	+	3471221	3471221	8553170	2	166,72,	0,670,
#Deleted in new
chr6_GL000256v2_alt	3473314	3480861	chr6_GL000256v2_alt:3473314-3480861	0	+	3473314	3473314	8553170	4	611,85,55,77,	0,730,5459,7470,
#Deleted in new
chr6_GL000256v2_alt	3473694	3474527	chr6_GL000256v2_alt:3473694-3474527	0	+	3473694	3473694	8553170	2	231,483,	0,350,
#Deleted in new
chr6_GL000256v2_alt	3473847	3483212	chr6_GL000256v2_alt:3473847-3483212	0	+	3473847	3482406	789624	7	78,85,55,103,483,110,96,	0,197,4926,6937,8497,9060,9269,
#Deleted in new
chr6_GL000256v2_alt	3480788	3484488	chr6_GL000256v2_alt:3480788-3484488	3	+	3482372	3484163	789624	9	75,129,123,110,96,171,80,154,372,	0,1556,1916,2119,2328,2505,2768,2921,3328,
#Deleted in new
chr6_GL000256v2_alt	3480810	3484488	chr6_GL000256v2_alt:3480810-3484488	1	+	3482372	3484163	789624	9	77,129,123,110,96,171,80,154,372,	0,1534,1894,2097,2306,2483,2746,2899,3306,
#Deleted in new
chr6_GL000256v2_alt	3480865	3483863	chr6_GL000256v2_alt:3480865-3483863	0	+	3482372	3483863	789624	8	22,129,123,110,96,111,80,154,	0,1479,1839,2042,2251,2488,2691,2844,
#Deleted in new
chr6_GL000256v2_alt	3481441	3484488	chr6_GL000256v2_alt:3481441-3484488	0	+	3481441	3481441	8553170	6	1386,110,96,171,307,372,	0,1466,1675,1852,2115,2675,
#Deleted in new
chr6_GL000256v2_alt	3482399	3483376	chr6_GL000256v2_alt:3482399-3483376	0	+	3482399	3482399	8553170	4	40,123,110,260,	0,305,508,717,
#Deleted in new
chr6_GL000256v2_alt	3483749	3484488	chr6_GL000256v2_alt:3483749-3484488	0	+	3483749	3483749	8553170	2	83,372,	0,367,
#Deleted in new
chr6_GL000256v2_alt	3484418	3493287	chr6_GL000256v2_alt:3484418-3493287	1	-	3485482	3487703	789624	7	1237,73,96,176,134,209,571,	0,1754,1953,2213,2725,3085,8298,
#Deleted in new
chr6_GL000256v2_alt	3484418	3494303	chr6_GL000256v2_alt:3484418-3494303	3	-	3485482	3487703	789624	7	1237,73,96,176,134,209,96,	0,1754,1953,2213,2725,3085,9789,
#Deleted in new
chr6_GL000256v2_alt	3484418	3492329	chr6_GL000256v2_alt:3484418-3492329	1	-	3485482	3487703	789624	7	1237,73,96,176,134,209,309,	0,1754,1953,2213,2725,3085,7602,
#Deleted in new
chr6_GL000256v2_alt	3484418	3493993	chr6_GL000256v2_alt:3484418-3493993	1	-	3485482	3487703	789624	7	1237,73,96,176,134,209,243,	0,1754,1953,2213,2725,3085,9332,
#Deleted in new
chr6_GL000256v2_alt	3484418	3489322	chr6_GL000256v2_alt:3484418-3489322	1	-	3485482	3487703	789624	7	1237,73,96,176,134,209,178,	0,1754,1953,2213,2725,3085,4726,
#Deleted in new
chr6_GL000256v2_alt	3484418	3493532	chr6_GL000256v2_alt:3484418-3493532	1	-	3485482	3487703	789624	7	1237,73,96,176,134,209,92,	0,1754,1953,2213,2725,3085,9022,
#Deleted in new
chr6_GL000256v2_alt	3484418	3493549	chr6_GL000256v2_alt:3484418-3493549	0	-	3484418	3484418	8553170	5	1237,73,96,209,833,	0,1754,1953,3085,8298,
#Deleted in new
chr6_GL000256v2_alt	3486371	3492104	chr6_GL000256v2_alt:3486371-3492104	0	-	3486371	3486371	8553170	5	96,176,134,256,84,	0,260,772,1085,5649,
#Deleted in new
chr6_GL000256v2_alt	3494560	3497000	chr6_GL000256v2_alt:3494560-3497000	3	+	3494718	3496533	789624	6	298,19,113,55,118,565,	0,1187,1297,1523,1655,1875,
#Deleted in new
chr6_GL000256v2_alt	3494643	3495980	chr6_GL000256v2_alt:3494643-3495980	1	+	3494718	3495974	789624	3	215,19,123,	0,1104,1214,
#Deleted in new
chr6_GL000256v2_alt	3497174	3500453	chr6_GL000256v2_alt:3497174-3500453	1	-	3497759	3500429	0	10	272,109,142,131,183,88,65,196,107,76,	0,556,1279,1600,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000256v2_alt	3497174	3500444	chr6_GL000256v2_alt:3497174-3500444	1	-	3497380	3500429	0	10	272,127,27,160,183,88,65,154,107,67,	0,383,638,1571,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000256v2_alt	3497174	3500531	chr6_GL000256v2_alt:3497174-3500531	1	-	3497349	3500429	0	11	272,127,27,142,131,183,88,65,196,107,154,	0,383,638,1279,1600,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000256v2_alt	3497174	3499138	chr6_GL000256v2_alt:3497174-3499138	0	-	3497174	3497174	8553170	5	272,127,27,142,364,	0,383,638,1279,1600,
#Deleted in new
chr6_GL000256v2_alt	3497174	3497842	chr6_GL000256v2_alt:3497174-3497842	0	-	3497174	3497174	8553170	2	272,285,	0,383,
#Deleted in new
chr6_GL000256v2_alt	3497174	3500453	chr6_GL000256v2_alt:3497174-3500453	0	-	3497174	3497174	789624	10	272,127,27,142,131,183,88,65,196,366,	0,383,638,1279,1600,1873,2146,2356,2587,2913,
#Deleted in new
chr6_GL000256v2_alt	3497174	3499138	chr6_GL000256v2_alt:3497174-3499138	0	-	3497174	3497174	8553170	4	272,109,142,364,	0,556,1279,1600,
#Deleted in new
chr6_GL000256v2_alt	3497174	3500529	chr6_GL000256v2_alt:3497174-3500529	1	-	3497349	3500429	789624	5	272,83,123,107,152,	0,383,2660,2913,3203,
#Deleted in new
chr6_GL000256v2_alt	3497174	3500529	chr6_GL000256v2_alt:3497174-3500529	3	-	3497349	3499813	789624	10	272,127,142,131,183,88,65,196,107,152,	0,383,1279,1600,1873,2146,2356,2587,2913,3203,
#Deleted in new
chr6_GL000256v2_alt	3497174	3500529	chr6_GL000256v2_alt:3497174-3500529	1	-	3497349	3500429	0	11	272,127,27,142,131,183,88,113,196,107,152,	0,383,638,1279,1600,1873,2146,2308,2587,2913,3203,
#Deleted in new
chr6_GL000256v2_alt	3497174	3500529	chr6_GL000256v2_alt:3497174-3500529	1	-	3497759	3500429	0	10	272,109,142,131,183,88,113,196,107,152,	0,556,1279,1600,1873,2146,2308,2587,2913,3203,
#Deleted in new
chr6_GL000256v2_alt	3497349	3500429	chr6_GL000256v2_alt:3497349-3500429	1	-	3497349	3498783	789624	8	97,127,27,142,131,59,30,52,	0,208,463,1104,1425,1698,2815,3028,
#Deleted in new
chr6_GL000256v2_alt	3499074	3500442	chr6_GL000256v2_alt:3499074-3500442	0	-	3499074	3500429	789624	6	156,88,117,183,107,65,	0,246,456,700,1013,1303,
#Deleted in new
chr6_GL000256v2_alt	3499086	3500444	chr6_GL000256v2_alt:3499086-3500444	0	-	3499086	3500429	789624	6	144,88,113,196,107,67,	0,234,396,675,1001,1291,
#Deleted in new
chr6_GL000256v2_alt	3499615	3500529	chr6_GL000256v2_alt:3499615-3500529	1	-	3499615	3500429	789624	4	32,196,107,152,	0,146,472,762,
#Deleted in new
chr6_GL000256v2_alt	3500939	3506391	chr6_GL000256v2_alt:3500939-3506391	3	-	3502586	3506120	789624	9	1740,87,89,154,136,191,248,74,492,	0,1869,2078,2507,2912,3231,3522,3988,4960,
#Deleted in new
chr6_GL000256v2_alt	3502460	3503720	chr6_GL000256v2_alt:3502460-3503720	0	-	3502460	3502460	8553170	2	646,274,	0,986,
#Deleted in new
chr6_GL000256v2_alt	3503177	3506147	chr6_GL000256v2_alt:3503177-3506147	0	-	3503177	3503177	8553170	6	423,136,191,248,74,248,	0,674,993,1284,1750,2722,
#Deleted in new
chr6_GL000256v2_alt	3503437	3505021	chr6_GL000256v2_alt:3503437-3505021	0	-	3503437	3503437	8553170	4	163,136,191,560,	0,414,733,1024,
#Deleted in new
chr6_GL000256v2_alt	3504484	3505282	chr6_GL000256v2_alt:3504484-3505282	0	-	3504484	3504484	8553170	2	225,355,	0,443,
#Deleted in new
chr6_GL000256v2_alt	3506970	3509111	chr6_GL000256v2_alt:3506970-3509111	1	-	3507570	3508718	789624	4	738,200,103,435,	0,943,1382,1706,
#Deleted in new
chr6_GL000256v2_alt	3506970	3511728	chr6_GL000256v2_alt:3506970-3511728	3	-	3507570	3508718	789624	8	738,200,103,59,84,81,93,98,	0,943,1382,1706,2275,3544,3971,4660,
#Deleted in new
chr6_GL000256v2_alt	3506970	3509073	chr6_GL000256v2_alt:3506970-3509073	1	-	3507570	3508687	789624	4	738,200,125,397,	0,943,1382,1706,
#Deleted in new
chr6_GL000256v2_alt	3506970	3509090	chr6_GL000256v2_alt:3506970-3509090	0	-	3508070	3508718	789624	4	738,162,103,414,	0,943,1382,1706,
#Deleted in new
chr6_GL000256v2_alt	3506971	3509323	chr6_GL000256v2_alt:3506971-3509323	1	-	3507978	3509323	789624	5	737,200,103,59,78,	0,942,1381,1705,2274,
#Deleted in new
chr6_GL000256v2_alt	3511047	3540275	chr6_GL000256v2_alt:3511047-3540275	3	-	3511641	3540136	789624	30	1308,98,148,296,139,82,220,176,384,524,113,253,185,154,88,118,153,146,160,123,114,114,195,156,237,123,348,296,82,212,	0,1481,2082,2456,3579,3807,4084,6000,6286,7245,8938,9305,15914,17632,17982,18293,18846,19268,20386,22105,22313,23155,24752,25289,25565,25916,26138,27671,28165,29016,
#Deleted in new
chr6_GL000256v2_alt	3511047	3520386	chr6_GL000256v2_alt:3511047-3520386	0	-	3511047	3511047	8553170	10	1308,98,148,296,139,82,220,176,2765,34,	0,1481,2082,2456,3579,3807,4084,6000,6286,9305,
#Deleted in new
chr6_GL000256v2_alt	3511047	3513182	chr6_GL000256v2_alt:3511047-3513182	0	-	3511047	3511047	8553170	2	1579,53,	0,2082,
#Deleted in new
chr6_GL000256v2_alt	3527135	3530443	chr6_GL000256v2_alt:3527135-3530443	0	-	3527135	3527135	8553170	5	11,154,118,153,128,	0,1544,2205,2758,3180,
#Deleted in new
chr6_GL000256v2_alt	3532067	3540265	chr6_GL000256v2_alt:3532067-3540265	0	-	3532067	3532067	8553170	11	1208,114,114,195,156,237,123,348,296,82,202,	0,1293,2135,3732,4269,4545,4896,5118,6651,7145,7996,
#Deleted in new
chr6_GL000256v2_alt	3608971	3687856	chr6_GL000256v2_alt:3608971-3687856	1	-	3609254	3687655	789624	26	1338,15,21,21,21,21,21,24,24,21,21,21,21,21,21,39,21,21,21,21,21,30,33,33,87,214,	0,7226,7984,9924,23686,29777,30414,30886,31955,37891,39340,42742,43217,43920,46283,46905,50545,56697,62073,62598,73122,73228,74890,75745,76863,78671,
#Deleted in new
chr6_GL000256v2_alt	3608971	3687828	chr6_GL000256v2_alt:3608971-3687828	1	-	3609254	3687655	789624	23	1338,15,21,21,21,21,24,21,21,21,21,21,21,39,90,21,21,21,30,33,33,87,186,	0,7226,7984,9924,29777,30414,30886,37891,39340,42742,43217,43920,46283,46905,56697,62073,62598,73122,73228,74890,75745,76863,78671,
#Deleted in new
chr6_GL000256v2_alt	3608973	3687861	chr6_GL000256v2_alt:3608973-3687861	3	-	3609254	3687655	789624	24	1336,15,21,21,21,21,21,24,21,21,21,21,21,21,39,21,21,21,21,30,33,33,87,219,	0,7224,7982,9922,23684,29775,30412,30884,37889,39338,42740,43215,43918,46281,46903,50543,56695,62071,62596,73226,74888,75743,76861,78669,
#Deleted in new
chr6_GL000256v2_alt	3609229	3687848	chr6_GL000256v2_alt:3609229-3687848	1	-	3609229	3687655	789624	31	69,636,69,296,15,21,21,21,21,21,22,20,22,21,21,23,21,21,39,21,21,21,17,5,21,9,17,33,33,87,206,	0,73,713,784,6968,7726,9666,23428,29519,30156,30630,32758,38110,39082,42484,42959,43662,46025,46647,50287,56439,61815,62340,63532,72864,72970,72983,74632,75487,76605,78413,
#Deleted in new
chr6_GL000256v2_alt	3609254	3687848	chr6_GL000256v2_alt:3609254-3687848	1	-	3609254	3687655	789624	26	1055,15,21,21,21,21,21,21,24,21,21,21,21,21,21,39,21,21,21,21,21,30,33,33,87,206,	0,6943,7701,9641,22781,23403,29494,30131,30603,37608,39057,42459,42934,43637,46000,46622,50262,56414,61790,62315,72839,72945,74607,75462,76580,78388,
#Deleted in new
chr6_GL000256v2_alt	3641488	3642448	chr6_GL000256v2_alt:3641488-3642448	7	+	3641488	3641488	16724991	1	960,	0,
#Deleted in new
chr6_GL000256v2_alt	3668801	3668908	chr6_GL000256v2_alt:3668801-3668908	3	+	3668801	3668801	8553170	1	107,	0,
#Deleted in new
chr6_GL000256v2_alt	3706430	3709608	chr6_GL000256v2_alt:3706430-3709608	3	+	3706430	3706430	789624	3	245,128,238,	0,1104,2940,
#Deleted in new
chr6_GL000256v2_alt	3709880	3723057	chr6_GL000256v2_alt:3709880-3723057	3	-	3709890	3723050	789624	7	99,282,348,21,282,348,86,	0,785,2080,7830,8980,10984,13091,
#Deleted in new
chr6_GL000256v2_alt	3710657	3723050	chr6_GL000256v2_alt:3710657-3723050	0	-	3717715	3723050	789624	5	290,344,21,112,79,	0,1307,7053,10443,12314,
#Deleted in new
chr6_GL000256v2_alt	3710657	3723050	chr6_GL000256v2_alt:3710657-3723050	1	-	3710657	3723050	789624	4	290,348,21,79,	0,1303,7053,12314,
#Deleted in new
chr6_GL000256v2_alt	3710657	3723050	chr6_GL000256v2_alt:3710657-3723050	1	-	3710657	3723050	789624	6	290,348,21,282,348,79,	0,1303,7053,8203,10207,12314,
#Deleted in new
chr6_GL000256v2_alt	3710657	3723050	chr6_GL000256v2_alt:3710657-3723050	1	-	3710657	3712207	789624	5	290,348,21,107,79,	0,1303,7053,10448,12314,
#Deleted in new
chr6_GL000256v2_alt	3720962	3723057	chr6_GL000256v2_alt:3720962-3723057	0	-	3720962	3723050	789624	2	247,86,	0,2009,
#Deleted in new
chr6_GL000256v2_alt	3754984	3760195	chr6_GL000256v2_alt:3754984-3760195	3	+	3755093	3759051	0	5	191,246,282,166,395,	0,2604,3341,3912,4816,
#Deleted in new
chr6_GL000256v2_alt	3755014	3758338	chr6_GL000256v2_alt:3755014-3758338	0	+	3755014	3755014	8553170	3	161,117,13,	0,2703,3311,
#Deleted in new
chr6_GL000256v2_alt	3755066	3760195	chr6_GL000256v2_alt:3755066-3760195	1	+	3755093	3759051	789624	5	109,246,207,166,395,	0,2522,3334,3830,4734,
#Deleted in new
chr6_GL000256v2_alt	3775103	3788759	chr6_GL000256v2_alt:3775103-3788759	7	-	3775103	3775103	16724991	2	267,76,	0,13580,
#Deleted in new
chr6_GL000256v2_alt	3800996	3801092	chr6_GL000256v2_alt:3800996-3801092	7	-	3800996	3800996	16724991	1	96,	0,
#Deleted in new
chr6_GL000256v2_alt	3826561	3826709	chr6_GL000256v2_alt:3826561-3826709	3	-	3826561	3826561	8553170	1	148,	0,
#Deleted in new
chr6_GL000256v2_alt	3831988	3832084	chr6_GL000256v2_alt:3831988-3832084	7	-	3831988	3831988	16724991	1	96,	0,
#Deleted in new
chr6_GL000256v2_alt	3848354	3848506	chr6_GL000256v2_alt:3848354-3848506	3	-	3848354	3848354	8553170	1	152,	0,
#Deleted in new
chr6_GL000256v2_alt	3851132	3866096	chr6_GL000256v2_alt:3851132-3866096	3	-	3851452	3866033	789624	6	334,24,111,282,270,163,	0,636,1134,1949,4968,14801,
#Deleted in new
chr6_GL000256v2_alt	3887782	3887930	chr6_GL000256v2_alt:3887782-3887930	3	-	3887782	3887782	8553170	1	148,	0,
#Deleted in new
chr6_GL000256v2_alt	3897749	3900287	chr6_GL000256v2_alt:3897749-3900287	7	-	3897749	3897749	16724991	4	15,24,111,282,	0,634,1447,2256,
#Deleted in new
chr6_GL000256v2_alt	3928345	3928509	chr6_GL000256v2_alt:3928345-3928509	3	-	3928345	3928345	8553170	1	164,	0,
#Deleted in new
chr6_GL000256v2_alt	3930463	3931403	chr6_GL000256v2_alt:3930463-3931403	7	+	3930463	3930463	16724991	1	940,	0,
#Deleted in new
chr6_GL000256v2_alt	3932909	3933317	chr6_GL000256v2_alt:3932909-3933317	7	-	3932909	3932909	16724991	1	408,	0,
#Deleted in new
chr6_GL000256v2_alt	3935636	3954816	chr6_GL000256v2_alt:3935636-3954816	7	-	3935636	3935636	16724991	5	26,111,284,264,100,	0,799,1612,9990,19080,
#Deleted in new
chr6_GL000256v2_alt	3938471	3939603	chr6_GL000256v2_alt:3938471-3939603	7	+	3938471	3938471	16724991	1	1132,	0,
#Deleted in new
chr6_GL000256v2_alt	3976598	3976747	chr6_GL000256v2_alt:3976598-3976747	3	-	3976598	3976598	8553170	1	149,	0,
#Deleted in new
chr6_GL000256v2_alt	3979127	3993834	chr6_GL000256v2_alt:3979127-3993834	3	-	3979454	3993771	789624	6	341,24,111,282,270,163,	0,969,1465,2273,6019,14544,
#Deleted in new
chr6_GL000256v2_alt	3981400	4012352	chr6_GL000256v2_alt:3981400-4012352	0	-	3981400	4012352	789624	4	282,270,151,48,	0,3746,29012,30904,
#Deleted in new
chr6_GL000256v2_alt	4039287	4045152	chr6_GL000256v2_alt:4039287-4045152	3	+	4039389	4044646	0	5	184,249,282,175,327,	0,3881,4575,5204,5538,
#Deleted in new
chr6_GL000256v2_alt	4039370	4045152	chr6_GL000256v2_alt:4039370-4045152	1	+	4039389	4044646	0	5	101,249,282,175,115,	0,3798,4492,5121,5667,
#Deleted in new
chr6_GL000256v2_alt	4056697	4063945	chr6_GL000256v2_alt:4056697-4063945	3	-	4057467	4063858	0	5	784,111,282,270,196,	0,1900,2526,5338,7052,
#Deleted in new
chr6_GL000256v2_alt	4057110	4057960	chr6_GL000256v2_alt:4057110-4057960	3	+	4057110	4057110	8553170	2	177,374,	0,476,
#Deleted in new
chr6_GL000256v2_alt	4057116	4059706	chr6_GL000256v2_alt:4057116-4059706	3	-	4057116	4057116	8553170	2	213,97,	0,2493,
#Deleted in new
chr6_GL000256v2_alt	4106753	4107585	chr6_GL000256v2_alt:4106753-4107585	7	-	4106753	4106753	16724991	1	832,	0,
#Deleted in new
chr6_GL000256v2_alt	4118147	4118970	chr6_GL000256v2_alt:4118147-4118970	0	+	4118147	4118147	8553170	2	143,238,	0,585,
#Deleted in new
chr6_GL000256v2_alt	4118172	4118975	chr6_GL000256v2_alt:4118172-4118975	3	+	4118172	4118172	8553170	3	118,35,243,	0,376,560,
#Deleted in new
chr6_GL000256v2_alt	4118527	4118978	chr6_GL000256v2_alt:4118527-4118978	0	+	4118527	4118527	8553170	2	56,246,	0,205,
#Deleted in new
chr6_GL000256v2_alt	4130904	4131842	chr6_GL000256v2_alt:4130904-4131842	7	-	4130904	4130904	16724991	2	80,276,	0,662,
#Deleted in new
chr6_GL000256v2_alt	4141488	4147359	chr6_GL000256v2_alt:4141488-4147359	3	+	4141590	4146541	789624	5	184,249,282,175,631,	0,3817,4449,4898,5240,
#Deleted in new
chr6_GL000256v2_alt	4156242	4163635	chr6_GL000256v2_alt:4156242-4163635	1	-	4156597	4163615	789624	5	369,24,282,267,117,	0,1183,2752,5562,7276,
#Deleted in new
chr6_GL000256v2_alt	4156242	4163679	chr6_GL000256v2_alt:4156242-4163679	3	-	4156597	4163615	789624	6	369,24,111,282,267,161,	0,1183,1675,2752,5562,7276,
#Deleted in new
chr6_GL000256v2_alt	4156242	4163677	chr6_GL000256v2_alt:4156242-4163677	1	-	4157378	4163615	789624	5	1207,111,282,267,159,	0,1675,2752,5562,7276,
#Deleted in new
chr6_GL000256v2_alt	4156532	4163611	chr6_GL000256v2_alt:4156532-4163611	0	-	4156597	4163611	789624	4	79,282,267,93,	0,2462,5272,6986,
#Deleted in new
chr6_GL000256v2_alt	4212174	4216460	chr6_GL000256v2_alt:4212174-4216460	3	-	4212627	4216363	0	6	489,32,111,282,270,188,	0,677,960,1557,2281,4098,
#Deleted in new
chr6_GL000256v2_alt	4212174	4216388	chr6_GL000256v2_alt:4212174-4216388	0	-	4212627	4216388	789624	6	489,32,111,282,158,116,	0,677,960,1557,2281,4098,
#Deleted in new
chr6_GL000256v2_alt	4212458	4216400	chr6_GL000256v2_alt:4212458-4216400	0	-	4212458	4212458	8553170	5	205,32,879,270,128,	0,393,676,1997,3814,
#Deleted in new
chr6_GL000256v2_alt	4213781	4216322	chr6_GL000256v2_alt:4213781-4216322	0	-	4213781	4216322	789624	3	223,270,50,	0,674,2491,
#Deleted in new
chr6_GL000256v2_alt	4213834	4216448	chr6_GL000256v2_alt:4213834-4216448	0	-	4213834	4216363	789624	3	101,270,176,	0,621,2438,
#Deleted in new
chr6_GL000256v2_alt	4221234	4237977	chr6_GL000256v2_alt:4221234-4237977	3	-	4221690	4237487	0	12	486,137,160,174,189,129,198,206,131,115,497,75,	0,7419,7949,8286,8637,10352,10646,13173,13662,15556,15760,16668,
#Deleted in new
chr6_GL000256v2_alt	4224835	4238030	chr6_GL000256v2_alt:4224835-4238030	1	-	4228108	4237487	789624	12	3453,137,160,174,189,129,198,206,131,115,497,128,	0,3818,4348,4685,5036,6751,7045,9572,10061,11955,12159,13067,
#Deleted in new
chr6_GL000256v2_alt	4228197	4229981	chr6_GL000256v2_alt:4228197-4229981	0	-	4228197	4228197	8553170	4	91,137,160,461,	0,456,986,1323,
#Deleted in new
chr6_GL000256v2_alt	4231548	4231987	chr6_GL000256v2_alt:4231548-4231987	0	-	4231548	4231548	8553170	2	167,107,	0,332,
#Deleted in new
chr6_GL000256v2_alt	4239968	4243903	chr6_GL000256v2_alt:4239968-4243903	1	-	4240210	4243665	0	6	331,205,130,112,148,373,	0,814,1417,1955,2225,3562,
#Deleted in new
chr6_GL000256v2_alt	4239968	4243299	chr6_GL000256v2_alt:4239968-4243299	3	-	4240210	4243248	0	6	331,205,130,112,148,198,	0,814,1417,1955,2225,3133,
#Deleted in new
chr6_GL000256v2_alt	4239968	4243272	chr6_GL000256v2_alt:4239968-4243272	1	-	4240210	4243248	789624	6	331,205,130,40,148,171,	0,814,1417,1955,2225,3133,
#Deleted in new
chr6_GL000256v2_alt	4239968	4241286	chr6_GL000256v2_alt:4239968-4241286	0	-	4239968	4239968	8553170	2	331,504,	0,814,
#Deleted in new
chr6_GL000256v2_alt	4240272	4243903	chr6_GL000256v2_alt:4240272-4243903	0	-	4240272	4240272	8553170	5	27,205,130,418,373,	0,510,1113,1651,3258,
#Deleted in new
chr6_GL000256v2_alt	4243337	4245747	chr6_GL000256v2_alt:4243337-4245747	3	+	4243337	4243337	789624	2	189,1078,	0,1332,
#Deleted in new
chr6_GL000256v2_alt	4243359	4245071	chr6_GL000256v2_alt:4243359-4245071	0	+	4243359	4243359	8553170	3	167,301,490,	0,462,1222,
#Deleted in new
chr6_GL000256v2_alt	4243384	4245238	chr6_GL000256v2_alt:4243384-4245238	0	+	4243384	4243384	789624	3	142,226,569,	0,512,1285,
#Deleted in new
chr6_GL000256v2_alt	4243384	4245457	chr6_GL000256v2_alt:4243384-4245457	0	+	4243384	4243384	789624	3	142,61,788,	0,677,1285,
#Deleted in new
chr6_GL000256v2_alt	4243385	4244947	chr6_GL000256v2_alt:4243385-4244947	0	+	4243385	4243385	8553170	2	737,278,	0,1284,
#Deleted in new
chr6_GL000256v2_alt	4243387	4258837	chr6_GL000256v2_alt:4243387-4258837	1	+	4255398	4258784	789624	6	139,68,132,130,142,181,	0,12002,13127,13869,14228,15269,
#Deleted in new
chr6_GL000256v2_alt	4243389	4245330	chr6_GL000256v2_alt:4243389-4245330	0	+	4243389	4243389	8553170	2	137,749,	0,1192,
#Deleted in new
chr6_GL000256v2_alt	4244087	4257689	chr6_GL000256v2_alt:4244087-4257689	0	+	4255398	4257689	789624	5	35,68,132,130,74,	0,11302,12427,13169,13528,
#Deleted in new
chr6_GL000256v2_alt	4244460	4253230	chr6_GL000256v2_alt:4244460-4253230	3	-	4244830	4253068	789624	11	577,137,163,174,189,129,198,206,131,115,940,	0,1859,2304,2710,3443,3781,5109,5733,6900,7179,7830,
#Deleted in new
chr6_GL000256v2_alt	4244460	4249392	chr6_GL000256v2_alt:4244460-4249392	0	-	4244460	4244460	8553170	5	577,137,163,174,1489,	0,1859,2304,2710,3443,
#Deleted in new
chr6_GL000256v2_alt	4244926	4247482	chr6_GL000256v2_alt:4244926-4247482	0	-	4244926	4244926	8553170	3	111,608,312,	0,1393,2244,
#Deleted in new
chr6_GL000256v2_alt	4253399	4258152	chr6_GL000256v2_alt:4253399-4258152	0	+	4253399	4253399	8553170	3	142,1997,537,	0,1990,4216,
#Deleted in new
chr6_GL000256v2_alt	4253412	4258837	chr6_GL000256v2_alt:4253412-4258837	1	+	4253481	4258784	0	6	129,68,132,130,142,181,	0,1977,3102,3844,4203,5244,
#Deleted in new
chr6_GL000256v2_alt	4253457	4278806	chr6_GL000256v2_alt:4253457-4278806	3	+	4253481	4278706	789624	6	84,68,130,142,93,144,	0,1932,3799,4158,22842,25205,
#Deleted in new
chr6_GL000256v2_alt	4255348	4257974	chr6_GL000256v2_alt:4255348-4257974	0	+	4255348	4255348	8553170	4	109,132,130,359,	0,1166,1908,2267,
#Deleted in new
chr6_GL000256v2_alt	4278390	4279067	chr6_GL000256v2_alt:4278390-4279067	7	-	4278390	4278390	16724991	1	677,	0,
#Deleted in new
chr6_GL000256v2_alt	4278435	4279052	chr6_GL000256v2_alt:4278435-4279052	5	-	4278435	4278435	16724991	1	617,	0,
#Deleted in new
chr6_GL000256v2_alt	4295622	4295697	chr6_GL000256v2_alt:4295622-4295697	7	+	4295622	4295622	16724991	1	75,	0,
#Deleted in new
chr6_GL000256v2_alt	4333861	4340303	chr6_GL000256v2_alt:4333861-4340303	1	-	4334203	4340040	0	6	359,36,117,285,282,318,	0,713,907,2543,4055,6124,
#Deleted in new
chr6_GL000256v2_alt	4333861	4337921	chr6_GL000256v2_alt:4333861-4337921	0	-	4334203	4337921	789624	4	359,117,285,5,	0,907,2543,4055,
#Deleted in new
chr6_GL000256v2_alt	4333861	4340254	chr6_GL000256v2_alt:4333861-4340254	1	-	4334220	4340040	789624	5	390,121,285,282,269,	0,903,2543,4055,6124,
#Deleted in new
chr6_GL000256v2_alt	4333861	4336672	chr6_GL000256v2_alt:4333861-4336672	2	-	4334203	4336672	789624	3	359,36,268,	0,713,2543,
#Deleted in new
chr6_GL000256v2_alt	4333861	4340217	chr6_GL000256v2_alt:4333861-4340217	0	-	4333861	4333861	8553170	2	4337,232,	0,6124,
#Deleted in new
chr6_GL000256v2_alt	4333861	4336134	chr6_GL000256v2_alt:4333861-4336134	0	-	4333861	4333861	8553170	2	359,1560,	0,713,
#Deleted in new
chr6_GL000256v2_alt	4333861	4336119	chr6_GL000256v2_alt:4333861-4336119	0	-	4333861	4333861	8553170	3	359,36,1351,	0,713,907,
#Deleted in new
chr6_GL000256v2_alt	4336596	4352360	chr6_GL000256v2_alt:4336596-4352360	0	-	4336596	4352274	789624	4	93,282,63,174,	0,1320,3389,15590,
#Deleted in new
chr6_GL000256v2_alt	4347847	4352346	chr6_GL000256v2_alt:4347847-4352346	1	-	4348101	4352274	789624	5	259,129,177,285,160,	0,661,1001,1909,4339,
#Deleted in new
chr6_GL000256v2_alt	4347847	4352299	chr6_GL000256v2_alt:4347847-4352299	1	-	4348101	4352274	789624	4	259,129,279,113,	0,661,1001,4339,
#Deleted in new
chr6_GL000256v2_alt	4347847	4352360	chr6_GL000256v2_alt:4347847-4352360	1	-	4348101	4352274	0	5	259,129,279,285,174,	0,661,1001,1909,4339,
#Deleted in new
chr6_GL000256v2_alt	4347847	4348909	chr6_GL000256v2_alt:4347847-4348909	0	-	4347847	4347847	8553170	2	259,401,	0,661,
#Deleted in new
chr6_GL000256v2_alt	4347847	4352346	chr6_GL000256v2_alt:4347847-4352346	0	-	4347847	4347847	8553170	4	259,126,1193,160,	0,664,1001,4339,
#Deleted in new
chr6_GL000256v2_alt	4347975	4369963	chr6_GL000256v2_alt:4347975-4369963	2	-	4347975	4347975	8553170	5	131,129,15,285,138,	0,533,873,1781,21850,
#Deleted in new
chr6_GL000256v2_alt	4348008	4367691	chr6_GL000256v2_alt:4348008-4367691	0	-	4348008	4348008	8553170	4	98,129,279,300,	0,500,840,19383,
#Deleted in new
chr6_GL000256v2_alt	4348508	4351699	chr6_GL000256v2_alt:4348508-4351699	0	-	4348508	4351552	789624	4	129,279,285,178,	0,340,1248,3013,
#Deleted in new
chr6_GL000256v2_alt	4348894	4368341	chr6_GL000256v2_alt:4348894-4368341	0	-	4348894	4350030	789624	3	233,285,93,	0,862,19354,
#Deleted in new
chr6_GL000256v2_alt	4349321	4352272	chr6_GL000256v2_alt:4349321-4352272	0	-	4349321	4349321	8553170	3	720,178,86,	0,2200,2865,
#Deleted in new
chr6_GL000256v2_alt	4367906	4430761	chr6_GL000256v2_alt:4367906-4430761	1	+	4422149	4429975	0	14	397,422,911,304,138,139,215,375,129,249,263,305,123,923,	0,2935,53361,55806,56730,57377,57596,57908,58788,59103,59472,61178,61692,61932,
#Deleted in new
chr6_GL000256v2_alt	4368504	4371266	chr6_GL000256v2_alt:4368504-4371266	0	+	4368504	4368504	8553170	2	95,425,	0,2337,
#Deleted in new
chr6_GL000256v2_alt	4368565	4425871	chr6_GL000256v2_alt:4368565-4425871	0	+	4368565	4425871	789624	6	34,304,138,139,215,57,	0,55147,56071,56718,56937,57249,
#Deleted in new
chr6_GL000256v2_alt	4369549	4370064	chr6_GL000256v2_alt:4369549-4370064	3	+	4369549	4369549	8553170	2	131,67,	0,448,
#Deleted in new
chr6_GL000256v2_alt	4370134	4430762	chr6_GL000256v2_alt:4370134-4430762	1	+	4422149	4429975	0	14	310,422,911,304,138,139,215,375,129,249,263,305,123,924,	0,707,51133,53578,54502,55149,55368,55680,56560,56875,57244,58950,59464,59704,
#Deleted in new
chr6_GL000256v2_alt	4421980	4430762	chr6_GL000256v2_alt:4421980-4430762	1	+	4422149	4429975	0	13	198,304,138,139,215,375,129,249,263,105,305,123,924,	0,1732,2656,3303,3522,3834,4714,5029,5398,6364,7104,7618,7858,
#Deleted in new
chr6_GL000256v2_alt	4422334	4430762	chr6_GL000256v2_alt:4422334-4430762	1	+	4423824	4429975	0	12	46,304,138,139,215,375,129,249,263,305,123,924,	0,1378,2302,2949,3168,3480,4360,4675,5044,6750,7264,7504,
#Deleted in new
chr6_GL000256v2_alt	4425394	4427467	chr6_GL000256v2_alt:4425394-4427467	0	+	4425394	4425394	8553170	5	28,215,1009,249,89,	0,108,420,1615,1984,
#Deleted in new
chr6_GL000256v2_alt	4425821	4427154	chr6_GL000256v2_alt:4425821-4427154	0	+	4425821	4425821	8553170	3	368,154,145,	0,848,1188,
#Deleted in new
chr6_GL000256v2_alt	4426802	4428054	chr6_GL000256v2_alt:4426802-4428054	0	+	4426802	4426802	8553170	3	21,249,676,	0,207,576,
#Deleted in new
chr6_GL000256v2_alt	4428796	4430543	chr6_GL000256v2_alt:4428796-4430543	2	+	4428796	4428796	8553170	2	925,705,	0,1042,
#Deleted in new
chr6_GL000256v2_alt	4428938	4430023	chr6_GL000256v2_alt:4428938-4430023	0	+	4428938	4428938	8553170	3	451,123,185,	0,660,900,
#Deleted in new
chr6_GL000256v2_alt	4453372	4458806	chr6_GL000256v2_alt:4453372-4458806	1	-	4456031	4458730	0	5	2663,136,282,249,158,	0,2901,3132,3834,5276,
#Deleted in new
chr6_GL000256v2_alt	4455800	4456578	chr6_GL000256v2_alt:4455800-4456578	0	-	4455800	4455800	8553170	3	235,136,31,	0,473,747,
#Deleted in new
chr6_GL000256v2_alt	4455994	4457248	chr6_GL000256v2_alt:4455994-4457248	0	-	4455994	4455994	8553170	3	41,513,42,	0,279,1212,
#Deleted in new
chr6_GL000256v2_alt	4456638	4457318	chr6_GL000256v2_alt:4456638-4457318	0	-	4456638	4456638	8553170	2	433,112,	0,568,
#Deleted in new
chr6_GL000256v2_alt	4456690	4458773	chr6_GL000256v2_alt:4456690-4458773	2	-	4456690	4458730	789624	3	96,82,125,	0,516,1958,
#Deleted in new
chr6_GL000256v2_alt	4457254	4458776	chr6_GL000256v2_alt:4457254-4458776	0	-	4457254	4457254	8553170	2	344,128,	0,1394,
#Deleted in new
chr6_GL000256v2_alt	4513551	4529693	chr6_GL000256v2_alt:4513551-4529693	3	-	4517632	4522553	0	6	779,167,282,246,199,31,	0,4069,4450,5072,8902,16111,
#Deleted in new
chr6_GL000256v2_alt	4513996	4522598	chr6_GL000256v2_alt:4513996-4522598	0	-	4513996	4513996	8553170	2	4873,145,	0,8457,
#Deleted in new
chr6_GL000256v2_alt	4516642	4518231	chr6_GL000256v2_alt:4516642-4518231	0	-	4517632	4518231	789624	2	1145,230,	0,1359,
#Deleted in new
chr6_GL000256v2_alt	4517680	4522620	chr6_GL000256v2_alt:4517680-4522620	0	-	4517680	4522553	789624	4	107,271,158,167,	0,321,1031,4773,
#Deleted in new
chr6_GL000256v2_alt	4518001	4529750	chr6_GL000256v2_alt:4518001-4529750	0	-	4518001	4522553	789624	4	282,246,302,88,	0,622,4452,11661,
#Deleted in new
chr6_GL000256v2_alt	4518086	4529738	chr6_GL000256v2_alt:4518086-4529738	0	-	4518086	4518086	8553170	3	197,246,76,	0,537,11576,
#Deleted in new
chr6_GL000256v2_alt	4518144	4522616	chr6_GL000256v2_alt:4518144-4522616	0	-	4518144	4518144	8553170	3	139,246,195,	0,479,4277,
#Deleted in new
chr6_GL000256v2_alt	4522484	4529758	chr6_GL000256v2_alt:4522484-4529758	0	-	4522484	4522553	789624	2	209,96,	0,7178,
#Deleted in new
chr6_GL000256v2_alt	4524908	4536184	chr6_GL000256v2_alt:4524908-4536184	1	+	4525024	4535221	0	6	216,264,282,111,24,663,	0,4746,9024,9853,10293,10613,
#Deleted in new
chr6_GL000256v2_alt	4524954	4536184	chr6_GL000256v2_alt:4524954-4536184	1	+	4525024	4535221	789624	6	170,264,192,111,24,663,	0,4700,9068,9807,10247,10567,
#Deleted in new
chr6_GL000256v2_alt	4524992	4530215	chr6_GL000256v2_alt:4524992-4530215	0	+	4524992	4524992	8553170	2	132,561,	0,4662,
#Deleted in new
chr6_GL000256v2_alt	4528433	4528843	chr6_GL000256v2_alt:4528433-4528843	7	+	4528433	4528433	16724991	1	410,	0,
#Deleted in new
chr6_GL000256v2_alt	4529368	4532995	chr6_GL000256v2_alt:4529368-4532995	0	+	4529368	4529368	8553170	3	149,264,499,	0,286,3128,
#Deleted in new
chr6_GL000256v2_alt	4529368	4533940	chr6_GL000256v2_alt:4529368-4533940	0	+	4529368	4529368	8553170	3	149,264,8,	0,286,4564,
#Deleted in new
chr6_GL000256v2_alt	4529425	4534214	chr6_GL000256v2_alt:4529425-4534214	0	+	4529425	4529425	8553170	2	493,282,	0,4507,
#Deleted in new
chr6_GL000256v2_alt	4529469	4534872	chr6_GL000256v2_alt:4529469-4534872	2	+	4529469	4534872	789624	4	48,247,282,111,	0,202,4463,5292,
#Deleted in new
chr6_GL000256v2_alt	4529654	4536184	chr6_GL000256v2_alt:4529654-4536184	0	+	4529654	4535530	789624	5	264,282,128,24,663,	0,4278,5107,5547,5867,
#Deleted in new
chr6_GL000256v2_alt	4529923	4532873	chr6_GL000256v2_alt:4529923-4532873	0	+	4529923	4529923	8553170	3	291,132,377,	0,1066,2573,
#Deleted in new
chr6_GL000256v2_alt	4540735	4546278	chr6_GL000256v2_alt:4540735-4546278	7	-	4540735	4540735	16724991	4	151,287,245,55,	0,366,1140,5488,
#Deleted in new
chr6_GL000256v2_alt	4552750	4556287	chr6_GL000256v2_alt:4552750-4556287	7	-	4552750	4552750	16724991	6	39,60,167,211,136,63,	0,144,2173,2786,3112,3474,
#Deleted in new
chr6_GL000256v2_alt	4561407	4568116	chr6_GL000256v2_alt:4561407-4568116	5	+	4561407	4561407	16724991	3	165,264,760,	0,4515,5949,
#Deleted in new
chr6_GL000256v2_alt	4561472	4577728	chr6_GL000256v2_alt:4561472-4577728	7	+	4561472	4561472	16724991	5	100,264,283,111,20,	0,4450,14987,15805,16236,
#Deleted in new
chr6_GL000256v2_alt	4579859	4579986	chr6_GL000256v2_alt:4579859-4579986	7	-	4579859	4579859	16724991	1	127,	0,
#Deleted in new
chr6_GL000256v2_alt	4611326	4638113	chr6_GL000256v2_alt:4611326-4638113	3	-	4612323	4638113	789624	63	1138,207,113,268,54,36,54,108,54,54,108,54,54,54,54,108,54,54,54,54,108,54,54,108,108,54,90,108,54,54,54,45,54,45,54,54,108,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,57,87,75,63,42,60,63,192,163,211,150,	0,1586,2171,2868,3250,3490,3832,4039,4389,4583,4745,5118,5838,6025,6274,6702,7150,7366,7645,7876,8129,8432,8589,8785,9031,9368,9607,9848,10378,10666,10820,11019,11191,11329,11483,11845,12892,13334,13577,13751,14039,14310,14499,14730,14980,15450,15626,15753,15997,16238,16391,16549,16749,17037,17576,17986,18282,18429,22309,23944,25679,26295,26637,
#Deleted in new
chr6_GL000256v2_alt	4611340	4626538	chr6_GL000256v2_alt:4611340-4626538	0	-	4611340	4611340	8553170	9	1124,207,113,268,37,45,54,45,91,	0,1572,2157,2854,14313,14485,14716,14966,15107,
#Deleted in new
chr6_GL000256v2_alt	4626776	4638113	chr6_GL000256v2_alt:4626776-4638113	0	-	4626776	4638113	789624	20	54,45,54,54,54,54,54,57,87,75,63,42,60,180,63,78,192,163,211,150,	0,176,303,547,788,941,1099,1299,1587,2126,2536,2832,2979,6012,6859,7568,8494,10229,10845,11187,
#Deleted in new
chr6_GL000256v2_alt	4635088	4638113	chr6_GL000256v2_alt:4635088-4638113	0	-	4635195	4638113	789624	4	374,163,211,150,	0,1917,2533,2875,
#Deleted in new
chr6_GL000256v2_alt	4664350	4664974	chr6_GL000256v2_alt:4664350-4664974	7	+	4664350	4664350	16724991	1	624,	0,
#Deleted in new
chr6_GL000256v2_alt	4686437	4688337	chr6_GL000256v2_alt:4686437-4688337	7	+	4686437	4686437	16724991	3	553,153,286,	0,837,1614,
#Deleted in new
chr6_GL000256v2_alt	4698237	4703645	chr6_GL000256v2_alt:4698237-4703645	3	+	4698237	4698237	789624	5	122,100,96,194,247,	0,256,1082,1979,5161,
#Deleted in new
chr6_GL000256v2_alt	4698287	4700643	chr6_GL000256v2_alt:4698287-4700643	0	+	4698287	4698287	8553170	4	72,100,103,427,	0,206,1025,1929,
#Deleted in new
chr6_GL000256v2_alt	4698299	4703690	chr6_GL000256v2_alt:4698299-4703690	0	+	4698299	4698299	8553170	5	60,100,96,129,292,	0,194,1020,1982,5099,
#Deleted in new
chr6_GL000256v2_alt	4698975	4720575	chr6_GL000256v2_alt:4698975-4720575	3	-	4699544	4720356	789624	20	716,119,112,66,108,96,124,119,156,134,58,133,101,151,176,68,76,53,85,309,	0,1246,1588,13195,13483,13719,14085,14493,16265,16896,17390,17573,17816,18207,18722,19198,19452,19707,19907,21291,
#Deleted in new
chr6_GL000256v2_alt	4698975	4720728	chr6_GL000256v2_alt:4698975-4720728	0	-	4698975	4698975	8553170	18	716,119,112,66,108,96,124,119,156,133,101,151,176,68,76,53,85,143,	0,1246,1588,13195,13483,13719,14085,14493,16265,17573,17816,18207,18722,19198,19452,19707,19907,21610,
#Deleted in new
chr6_GL000256v2_alt	4698982	4700339	chr6_GL000256v2_alt:4698982-4700339	0	+	4698982	4698982	8553170	2	433,36,	0,1321,
#Deleted in new
chr6_GL000256v2_alt	4698982	4720557	chr6_GL000256v2_alt:4698982-4720557	0	-	4720089	4720356	789624	19	709,119,112,66,108,96,124,119,156,134,58,133,101,151,176,68,76,85,740,	0,1239,1581,13188,13476,13712,14078,14486,16258,16889,17383,17566,17809,18200,18715,19191,19445,19900,20835,
#Deleted in new
chr6_GL000256v2_alt	4699309	4712300	chr6_GL000256v2_alt:4699309-4712300	0	-	4699309	4699309	8553170	4	382,119,112,130,	0,912,1254,12861,
#Deleted in new
chr6_GL000256v2_alt	4699514	4712990	chr6_GL000256v2_alt:4699514-4712990	0	-	4699514	4699514	8553170	6	177,119,112,66,108,296,	0,707,1049,12656,12944,13180,
#Deleted in new
chr6_GL000256v2_alt	4700620	4713251	chr6_GL000256v2_alt:4700620-4713251	0	-	4700620	4700620	8553170	5	55,66,97,96,191,	0,11550,11849,12074,12440,
#Deleted in new
chr6_GL000256v2_alt	4712234	4712909	chr6_GL000256v2_alt:4712234-4712909	0	-	4712234	4712234	8553170	2	332,215,	0,460,
#Deleted in new
chr6_GL000256v2_alt	4712765	4715949	chr6_GL000256v2_alt:4712765-4715949	0	-	4712765	4712765	8553170	4	25,527,156,78,	0,295,2475,3106,
#Deleted in new
chr6_GL000256v2_alt	4716149	4716837	chr6_GL000256v2_alt:4716149-4716837	0	-	4716149	4716149	8553170	3	274,133,46,	0,399,642,
#Deleted in new
chr6_GL000256v2_alt	4716553	4720458	chr6_GL000256v2_alt:4716553-4720458	0	-	4716553	4716553	8553170	9	128,101,151,176,68,76,53,85,87,	0,238,629,1144,1620,1874,2129,2329,3818,
#Deleted in new
chr6_GL000256v2_alt	4716554	4720565	chr6_GL000256v2_alt:4716554-4720565	0	-	4716554	4716554	8553170	9	127,101,151,205,68,76,53,85,194,	0,237,628,1143,1619,1873,2128,2328,3817,
#Deleted in new
chr6_GL000256v2_alt	4720690	4721407	chr6_GL000256v2_alt:4720690-4721407	0	+	4720800	4721407	789624	2	113,99,	0,618,
#Deleted in new
chr6_GL000256v2_alt	4720755	4721407	chr6_GL000256v2_alt:4720755-4721407	0	+	4720755	4720755	8553170	2	48,140,	0,512,
#Deleted in new
chr6_GL000256v2_alt	4720812	4721407	chr6_GL000256v2_alt:4720812-4721407	0	+	4720812	4720812	8553170	1	595,	0,
#Deleted in new
chr6_GL000256v2_alt	4721308	4721407	chr6_GL000256v2_alt:4721308-4721407	3	+	4721308	4721407	789624	1	99,	0,
#Deleted in new
chr6_GL000256v2_alt	4724005	4724211	chr6_GL000256v2_alt:4724005-4724211	0	+	4724005	4724005	8553170	1	206,	0,
#Deleted in new
chr6_GL000256v2_alt	4777673	4777956	chr6_GL000256v2_alt:4777673-4777956	3	-	4777673	4777673	8553170	1	283,	0,
#Deleted in new
chr6_GL000256v2_alt	4777673	4777923	chr6_GL000256v2_alt:4777673-4777923	0	-	4777673	4777673	8553170	1	250,	0,
#Deleted in new
chr6_GL000256v2_alt	4838069	4838171	chr6_GL000256v2_alt:4838069-4838171	7	-	4838069	4838069	16724991	1	102,	0,
#Deleted in new
chr6_GL000256v2_alt	4840230	4858622	chr6_GL000256v2_alt:4840230-4858622	3	+	4840680	4858388	0	11	462,138,100,54,51,401,780,291,74,76,279,	0,6497,6756,11781,11952,12196,13319,14663,15059,15267,18113,
#Deleted in new
chr6_GL000256v2_alt	4840555	4852557	chr6_GL000256v2_alt:4840555-4852557	0	+	4840680	4852557	789624	7	137,138,100,123,54,51,131,	0,6172,6431,8535,11456,11627,11871,
#Deleted in new
chr6_GL000256v2_alt	4848757	4849255	chr6_GL000256v2_alt:4848757-4849255	7	-	4848757	4848757	16724991	1	498,	0,
#Deleted in new
chr6_GL000256v2_alt	4848789	4852564	chr6_GL000256v2_alt:4848789-4852564	0	+	4848789	4848789	8553170	4	424,54,51,138,	0,3222,3393,3637,
#Deleted in new
chr6_GL000256v2_alt	4854918	4855788	chr6_GL000256v2_alt:4854918-4855788	0	+	4854918	4854918	8553170	3	266,74,291,	0,371,579,
#Deleted in new
chr6_GL000256v2_alt	4859096	4862021	chr6_GL000256v2_alt:4859096-4862021	0	+	4860990	4862021	789624	6	107,50,175,82,96,99,	0,796,1878,2138,2328,2826,
#Deleted in new
chr6_GL000256v2_alt	4859416	4864596	chr6_GL000256v2_alt:4859416-4864596	2	+	4860990	4863991	789624	15	526,175,82,96,101,149,96,69,124,68,105,127,69,81,62,	0,1558,1818,2008,2506,2719,3046,3351,3553,3787,4033,4263,4569,4898,5118,
#Deleted in new
chr6_GL000256v2_alt	4859477	4862558	chr6_GL000256v2_alt:4859477-4862558	0	+	4860990	4862558	789624	7	137,175,82,96,101,149,96,	0,1497,1757,1947,2445,2658,2985,
#Deleted in new
chr6_GL000256v2_alt	4859484	4861506	chr6_GL000256v2_alt:4859484-4861506	0	+	4859484	4859484	8553170	4	130,175,74,82,	0,1490,1758,1940,
#Deleted in new
chr6_GL000256v2_alt	4859687	4865178	chr6_GL000256v2_alt:4859687-4865178	1	+	4860990	4864823	0	15	255,175,82,96,101,149,96,69,124,68,105,190,95,81,644,	0,1287,1547,1737,2235,2448,2775,3080,3282,3516,3762,3992,4272,4627,4847,
#Deleted in new
chr6_GL000256v2_alt	4859687	4865178	chr6_GL000256v2_alt:4859687-4865178	1	+	4860990	4864599	0	14	255,175,82,96,101,149,96,69,124,68,105,179,81,644,	0,1287,1547,1737,2235,2448,2775,3080,3282,3516,3762,4003,4627,4847,
#Deleted in new
chr6_GL000256v2_alt	4859754	4865164	chr6_GL000256v2_alt:4859754-4865164	0	+	4859754	4859754	8553170	14	188,175,82,36,17,423,69,124,68,105,190,95,81,630,	0,1220,1480,1670,2252,2381,3013,3215,3449,3695,3925,4205,4560,4780,
#Deleted in new
chr6_GL000256v2_alt	4861710	4862671	chr6_GL000256v2_alt:4861710-4862671	0	+	4861710	4861710	8553170	2	313,536,	0,425,
#Deleted in new
chr6_GL000256v2_alt	4862495	4864939	chr6_GL000256v2_alt:4862495-4864939	1	+	4864035	4864599	789624	9	63,69,124,68,105,179,95,81,405,	0,272,474,708,954,1195,1464,1819,2039,
#Deleted in new
chr6_GL000256v2_alt	4863062	4864938	chr6_GL000256v2_alt:4863062-4864938	0	+	4863062	4863062	8553170	6	31,68,420,95,81,404,	0,141,387,897,1252,1472,
#Deleted in new
chr6_GL000256v2_alt	4863242	4864776	chr6_GL000256v2_alt:4863242-4864776	0	+	4863242	4864776	789624	6	29,105,179,95,78,242,	0,207,448,717,1075,1292,
#Deleted in new
chr6_GL000256v2_alt	4863789	4865139	chr6_GL000256v2_alt:4863789-4865139	0	+	4863789	4864823	789624	4	80,99,78,605,	0,170,528,745,
#Deleted in new
chr6_GL000256v2_alt	4863965	4865037	chr6_GL000256v2_alt:4863965-4865037	0	+	4863965	4863965	8553170	2	430,503,	0,569,
#Deleted in new
chr6_GL000256v2_alt	4865166	4867042	chr6_GL000256v2_alt:4865166-4867042	1	-	4865374	4866910	0	6	335,50,46,60,215,231,	0,478,655,809,1039,1645,
#Deleted in new
chr6_GL000256v2_alt	4865166	4866847	chr6_GL000256v2_alt:4865166-4866847	1	-	4865374	4866725	0	6	335,50,46,60,215,164,	0,478,655,809,1039,1517,
#Deleted in new
chr6_GL000256v2_alt	4865166	4866818	chr6_GL000256v2_alt:4865166-4866818	0	-	4866596	4866725	789624	6	335,50,46,60,215,225,	0,478,655,809,1039,1427,
#Deleted in new
chr6_GL000256v2_alt	4865166	4866614	chr6_GL000256v2_alt:4865166-4866614	0	-	4865166	4865166	8553170	4	335,50,46,639,	0,478,655,809,
#Deleted in new
chr6_GL000256v2_alt	4865166	4866768	chr6_GL000256v2_alt:4865166-4866768	1	-	4865374	4866393	0	5	335,50,46,60,563,	0,478,655,809,1039,
#Deleted in new
chr6_GL000256v2_alt	4865266	4866268	chr6_GL000256v2_alt:4865266-4866268	0	-	4865266	4865266	8553170	4	235,50,214,63,	0,378,555,939,
#Deleted in new
chr6_GL000256v2_alt	4865274	4866867	chr6_GL000256v2_alt:4865274-4866867	2	-	4865971	4866867	789624	6	227,50,46,64,215,56,	0,370,547,697,931,1537,
#Deleted in new
chr6_GL000256v2_alt	4865274	4866783	chr6_GL000256v2_alt:4865274-4866783	0	-	4865274	4865274	8553170	7	111,28,50,46,60,336,100,	0,199,370,547,701,931,1409,
#Deleted in new
chr6_GL000256v2_alt	4865285	4866833	chr6_GL000256v2_alt:4865285-4866833	0	-	4865285	4865285	8553170	2	750,628,	0,920,
#Deleted in new
chr6_GL000256v2_alt	4865343	4866795	chr6_GL000256v2_alt:4865343-4866795	0	-	4865343	4865343	8553170	6	158,50,46,60,336,112,	0,301,478,632,862,1340,
#Deleted in new
chr6_GL000256v2_alt	4866708	4866912	chr6_GL000256v2_alt:4866708-4866912	0	-	4866708	4866708	8553170	2	27,101,	0,103,
#Deleted in new
chr6_GL000256v2_alt	4868794	4887834	chr6_GL000256v2_alt:4868794-4887834	0	+	4868794	4868794	8553170	10	262,122,106,92,122,154,99,624,145,335,	0,3407,5728,12091,12615,15082,15445,17598,18349,18705,
#Deleted in new
chr6_GL000256v2_alt	4868888	4902412	chr6_GL000256v2_alt:4868888-4902412	3	+	4868989	4900629	789624	19	168,122,106,92,122,154,99,624,145,145,237,202,179,42,1072,174,212,91,1930,	0,3313,5634,11997,12521,14988,15351,17504,18255,18611,20565,21009,21417,22289,22725,24280,26409,27677,31594,
#Deleted in new
chr6_GL000256v2_alt	4868989	4901118	chr6_GL000256v2_alt:4868989-4901118	1	+	4868989	4897526	789624	20	67,122,106,92,122,154,99,624,145,145,237,202,179,42,1072,174,212,91,80,636,	0,3212,5533,11896,12420,14887,15250,17403,18154,18510,20464,20908,21316,22188,22624,24179,26308,27576,28522,31493,
#Deleted in new
chr6_GL000256v2_alt	4880455	4900933	chr6_GL000256v2_alt:4880455-4900933	1	+	4880635	4900629	789624	17	298,92,122,154,99,624,145,145,237,202,179,42,1072,174,212,91,451,	0,430,954,3421,3784,5937,6688,7044,8998,9442,9850,10722,11158,12713,14842,16110,20027,
#Deleted in new
chr6_GL000256v2_alt	4887196	4889300	chr6_GL000256v2_alt:4887196-4889300	0	+	4887196	4887196	8553170	3	92,145,23,	0,303,2081,
#Deleted in new
chr6_GL000256v2_alt	4889910	4893189	chr6_GL000256v2_alt:4889910-4893189	0	+	4889910	4893189	789624	4	189,179,1072,21,	0,395,1703,3258,
#Deleted in new
chr6_GL000256v2_alt	4895386	4897776	chr6_GL000256v2_alt:4895386-4897776	0	+	4895386	4895386	8553170	3	123,91,265,	0,1179,2125,
#Deleted in new
chr6_GL000256v2_alt	4895433	4896883	chr6_GL000256v2_alt:4895433-4896883	0	+	4895433	4895433	8553170	2	76,318,	0,1132,
#Deleted in new
chr6_GL000256v2_alt	4903301	4906271	chr6_GL000256v2_alt:4903301-4906271	3	+	4903823	4905245	789624	2	197,2519,	0,451,
#Deleted in new
chr6_GL383533v1_alt	9744	10004	chr6_GL383533v1_alt:9744-10004	7	+	9744	9744	16724991	1	260,	0,
#Deleted in new
chr6_GL383533v1_alt	25606	26615	chr6_GL383533v1_alt:25606-26615	3	-	25606	25606	8553170	3	268,98,108,	0,668,901,
#Deleted in new
chr6_GL383533v1_alt	40137	40672	chr6_GL383533v1_alt:40137-40672	7	+	40137	40137	16724991	1	535,	0,
#Deleted in new
chr6_GL383533v1_alt	89070	89960	chr6_GL383533v1_alt:89070-89960	7	-	89070	89070	16724991	1	890,	0,
#Deleted in new
chr6_GL383533v1_alt	120030	120301	chr6_GL383533v1_alt:120030-120301	7	+	120030	120030	16724991	1	271,	0,
#Deleted in new
chr6_KB021644v2_alt	24347	24581	chr6_KB021644v2_alt:24347-24581	3	+	24347	24347	8553170	1	234,	0,
#Deleted in new
chr6_KI270758v1_alt	9688	14891	chr6_KI270758v1_alt:9688-14891	3	-	10822	14782	789624	5	393,166,282,246,191,	0,1123,1578,2351,5012,
#Deleted in new
chr6_KI270758v1_alt	46832	59248	chr6_KI270758v1_alt:46832-59248	1	+	46832	59248	789624	6	79,348,282,21,348,290,	0,1838,3908,5317,10765,12126,
#Deleted in new
chr6_KI270758v1_alt	46832	59248	chr6_KI270758v1_alt:46832-59248	3	+	57698	59248	789624	5	79,107,21,348,290,	0,1838,5317,10765,12126,
#Deleted in new
chr6_KI270797v1_alt	292	1056	chr6_KI270797v1_alt:292-1056	3	-	292	292	8553170	3	226,149,28,	0,330,736,
#Deleted in new
chr6_KI270797v1_alt	705	14194	chr6_KI270797v1_alt:705-14194	3	+	705	705	8553170	2	36,299,	0,13190,
#Deleted in new
chr6_KI270797v1_alt	15315	26761	chr6_KI270797v1_alt:15315-26761	3	-	15386	26660	789624	4	182,159,207,221,	0,2966,3954,11225,
#Deleted in new
chr6_KI270797v1_alt	24711	26789	chr6_KI270797v1_alt:24711-26789	0	-	24711	24711	789624	1	2078,	0,
#Deleted in new
chr6_KI270797v1_alt	26823	56786	chr6_KI270797v1_alt:26823-56786	1	+	26859	56715	789624	18	42,169,140,102,90,98,137,115,103,30,69,174,84,77,126,78,114,255,	0,2242,3661,4716,5097,7346,8216,9020,10807,15016,16481,17918,21697,23648,24318,24712,27560,29708,
#Deleted in new
chr6_KI270797v1_alt	26823	31937	chr6_KI270797v1_alt:26823-31937	0	+	31602	31937	789624	6	42,86,169,135,102,17,	0,1665,2242,3666,4716,5097,
#Deleted in new
chr6_KI270797v1_alt	26823	34262	chr6_KI270797v1_alt:26823-34262	0	+	31602	34262	789624	6	42,89,140,102,90,93,	0,2322,3661,4716,5097,7346,
#Deleted in new
chr6_KI270797v1_alt	26826	56722	chr6_KI270797v1_alt:26826-56722	1	+	31602	56715	789624	17	39,140,102,90,98,137,115,103,30,69,174,84,77,126,219,114,191,	0,3658,4713,5094,7343,8213,9017,10804,15013,16478,17915,21694,23645,24315,24830,27557,29705,
#Deleted in new
chr6_KI270797v1_alt	26826	56786	chr6_KI270797v1_alt:26826-56786	1	+	26859	56715	789624	18	39,169,140,102,90,98,137,115,103,30,69,174,84,77,126,219,114,255,	0,2239,3658,4713,5094,7343,8213,9017,10804,15013,16478,17915,21694,23645,24315,24830,27557,29705,
#Deleted in new
chr6_KI270797v1_alt	26826	31966	chr6_KI270797v1_alt:26826-31966	0	+	31602	31966	789624	6	39,56,169,140,102,46,	0,1692,2239,3658,4713,5094,
#Deleted in new
chr6_KI270797v1_alt	26826	34186	chr6_KI270797v1_alt:26826-34186	0	+	26859	30536	789624	6	39,169,135,102,90,17,	0,2239,3663,4713,5094,7343,
#Deleted in new
chr6_KI270797v1_alt	26839	56718	chr6_KI270797v1_alt:26839-56718	1	+	26859	56715	789624	17	26,169,140,102,90,98,137,115,103,30,69,174,84,77,126,114,187,	0,2226,3645,4700,5081,7330,8200,9004,10791,15000,16465,17902,21681,23632,24302,27544,29692,
#Deleted in new
chr6_KI270797v1_alt	26839	30857	chr6_KI270797v1_alt:26839-30857	0	+	26839	26839	8553170	3	26,169,373,	0,2226,3645,
#Deleted in new
chr6_KI270797v1_alt	26839	35059	chr6_KI270797v1_alt:26839-35059	0	+	26859	35059	789624	6	26,169,140,90,98,20,	0,2226,3645,5081,7330,8200,
#Deleted in new
chr6_KI270797v1_alt	26849	31617	chr6_KI270797v1_alt:26849-31617	0	+	31602	31617	8553170	5	16,144,169,140,78,	0,1390,2216,3635,4690,
#Deleted in new
chr6_KI270797v1_alt	26998	56719	chr6_KI270797v1_alt:26998-56719	3	+	31602	56715	789624	17	141,169,140,102,90,98,137,115,103,69,174,84,77,126,219,114,188,	0,2067,3486,4541,4922,7171,8041,8845,10632,16306,17743,21522,23473,24143,24658,27385,29533,
#Deleted in new
chr6_KI270797v1_alt	29106	35125	chr6_KI270797v1_alt:29106-35125	0	+	29106	31550	789624	5	128,102,90,98,86,	0,2433,2814,5063,5933,
#Deleted in new
chr6_KI270797v1_alt	42216	56786	chr6_KI270797v1_alt:42216-56786	0	+	42216	42216	8553170	8	1157,174,84,77,126,219,114,255,	0,2525,6304,8255,8925,9440,12167,14315,
#Deleted in new
chr6_KI270797v1_alt	45614	47244	chr6_KI270797v1_alt:45614-47244	3	+	45614	45614	8553170	1	1630,	0,
#Deleted in new
chr6_KI270797v1_alt	48245	51752	chr6_KI270797v1_alt:48245-51752	0	+	48245	48245	8553170	4	359,77,126,96,	0,2226,2896,3411,
#Deleted in new
chr6_KI270797v1_alt	51079	56718	chr6_KI270797v1_alt:51079-56718	0	+	51079	51079	8553170	4	188,219,114,187,	0,577,3304,5452,
#Deleted in new
chr6_KI270797v1_alt	63991	74027	chr6_KI270797v1_alt:63991-74027	3	-	63991	63991	789624	2	2329,89,	0,9947,
#Deleted in new
chr6_KI270797v1_alt	65522	78075	chr6_KI270797v1_alt:65522-78075	3	+	65522	65522	789624	3	96,179,2043,	0,4863,10510,
#Deleted in new
chr6_KI270797v1_alt	84519	85304	chr6_KI270797v1_alt:84519-85304	3	-	84519	84519	8553170	2	176,518,	0,267,
#Deleted in new
chr6_KI270798v1_alt	0	7125	chr6_KI270798v1_alt:0-7125	3	+	0	0	8553170	2	2668,308,	0,6817,
#Deleted in new
chr6_KI270798v1_alt	2568	4000	chr6_KI270798v1_alt:2568-4000	3	-	2568	2568	789624	2	258,78,	0,1354,
#Deleted in new
chr6_KI270798v1_alt	2611	6707	chr6_KI270798v1_alt:2611-6707	0	+	2611	2611	8553170	2	57,261,	0,3835,
#Deleted in new
chr6_KI270798v1_alt	4176	6707	chr6_KI270798v1_alt:4176-6707	0	+	4176	4176	8553170	2	85,261,	0,2270,
#Deleted in new
chr6_KI270798v1_alt	9443	17711	chr6_KI270798v1_alt:9443-17711	3	-	10111	17377	0	11	674,118,799,217,170,131,61,258,61,297,388,	0,782,1025,2713,3048,3363,4032,6033,6523,7306,7880,
#Deleted in new
chr6_KI270798v1_alt	16938	33803	chr6_KI270798v1_alt:16938-33803	0	-	16938	17377	789624	3	108,400,40,	0,385,16825,
#Deleted in new
chr6_KI270798v1_alt	17940	141909	chr6_KI270798v1_alt:17940-141909	3	+	18295	141151	789624	11	370,1755,181,102,173,93,207,109,93,52,586,	0,26667,32376,39746,57448,67523,106907,109633,114107,123170,123383,
#Deleted in new
chr6_KI270798v1_alt	22558	141637	chr6_KI270798v1_alt:22558-141637	1	+	22643	141151	789624	11	133,1755,181,102,173,93,207,109,93,52,314,	0,22049,27758,35128,52830,62905,102289,105015,109489,118552,118765,
#Deleted in new
chr6_KI270798v1_alt	25113	25613	chr6_KI270798v1_alt:25113-25613	3	-	25113	25113	8553170	1	500,	0,
#Deleted in new
chr6_KI270798v1_alt	33993	143626	chr6_KI270798v1_alt:33993-143626	1	+	44628	141151	789624	11	87,1755,181,102,173,93,207,109,93,52,2303,	0,10614,16323,23693,41395,51470,90854,93580,98054,107117,107330,
#Deleted in new
chr6_KI270798v1_alt	33995	142203	chr6_KI270798v1_alt:33995-142203	1	+	57775	141151	789624	9	85,102,173,93,207,109,93,52,880,	0,23691,41393,51468,90852,93578,98052,107115,107328,
#Deleted in new
chr6_KI270798v1_alt	140739	141639	chr6_KI270798v1_alt:140739-141639	0	+	140739	140739	8553170	2	423,316,	0,584,
#Deleted in new
chr6_KI270798v1_alt	150699	155886	chr6_KI270798v1_alt:150699-155886	3	+	150699	150699	8553170	1	5187,	0,
#Deleted in new
chr6_KI270798v1_alt	271677	271782	chr6_KI270798v1_alt:271677-271782	3	-	271677	271677	8553170	1	105,	0,
#Deleted in new
chr6_KI270799v1_alt	3621	79839	chr6_KI270799v1_alt:3621-79839	3	-	3621	3621	8553170	3	116,128,109,	0,73263,76109,
#Deleted in new
chr6_KI270800v1_alt	13603	14474	chr6_KI270800v1_alt:13603-14474	7	+	13603	13603	16724991	1	871,	0,
#Deleted in new
chr6_KI270800v1_alt	62116	63226	chr6_KI270800v1_alt:62116-63226	7	-	62116	62116	16724991	1	1110,	0,
#Deleted in new
chr6_KI270801v1_alt	57	476	chr6_KI270801v1_alt:57-476	7	-	57	57	16724991	1	419,	0,
#Deleted in new
chr6_KI270801v1_alt	4622	5536	chr6_KI270801v1_alt:4622-5536	7	+	4622	4622	16724991	2	37,435,	0,479,
#Deleted in new
chr6_KI270801v1_alt	4887	5777	chr6_KI270801v1_alt:4887-5777	7	-	4887	4887	16724991	2	218,187,	0,703,
#Deleted in new
chr6_KI270801v1_alt	9751	26753	chr6_KI270801v1_alt:9751-26753	3	+	9751	9751	8553170	4	79,119,202,225,	0,789,15798,16777,
#Deleted in new
chr6_KI270801v1_alt	53269	263738	chr6_KI270801v1_alt:53269-263738	3	-	55182	246130	789624	7	1945,136,1049,459,159,240,113,	0,11616,104811,121404,146958,192770,210356,
#Deleted in new
chr6_KI270801v1_alt	53391	246279	chr6_KI270801v1_alt:53391-246279	1	-	55182	246130	789624	6	1823,136,1049,459,159,240,	0,11494,104689,121282,146836,192648,
#Deleted in new
chr6_KI270801v1_alt	54008	263795	chr6_KI270801v1_alt:54008-263795	1	-	55182	200372	789624	6	1206,136,1049,459,159,170,	0,10877,104072,120665,146219,209617,
#Deleted in new
chr6_KI270801v1_alt	158774	246156	chr6_KI270801v1_alt:158774-246156	0	-	158774	246156	789624	3	355,159,117,	0,41453,87265,
#Deleted in new
chr6_KI270801v1_alt	255030	255250	chr6_KI270801v1_alt:255030-255250	7	+	255030	255030	16724991	1	220,	0,
#Deleted in new
chr6_KI270801v1_alt	313976	870008	chr6_KI270801v1_alt:313976-870008	3	-	315424	869692	0	30	1502,136,164,126,132,174,150,136,155,117,98,37,77,88,185,161,139,37,274,106,202,110,303,294,175,116,82,272,123,416,	0,4243,4885,7878,8144,12337,14052,14463,16942,21990,22515,23894,26683,28122,29941,36305,44486,100115,102876,114170,117794,119072,125047,219789,254279,275392,277878,357396,432923,555616,
#Deleted in new
chr6_KI270801v1_alt	314174	869917	chr6_KI270801v1_alt:314174-869917	1	-	315424	869692	0	31	1304,136,164,126,132,174,150,136,155,117,98,37,18,77,88,185,161,139,37,274,106,202,110,303,294,175,116,82,272,123,325,	0,4045,4687,7680,7946,12139,13854,14265,16744,21792,22317,23696,26272,26485,27924,29743,36107,44288,99917,102678,113972,117596,118874,124849,219591,254081,275194,277680,357198,432725,555418,
#Deleted in new
chr6_KI270801v1_alt	314174	869810	chr6_KI270801v1_alt:314174-869810	1	-	315424	869692	0	33	1304,136,164,126,132,174,150,136,155,117,98,37,18,77,88,185,12,36,161,139,37,274,106,202,110,303,294,175,116,82,272,123,218,	0,4045,4687,7680,7946,12139,13854,14265,16744,21792,22317,23696,26272,26485,27924,29743,32219,34220,36107,44288,99917,102678,113972,117596,118874,124849,219591,254081,275194,277680,357198,432725,555418,
#Deleted in new
chr6_KI270801v1_alt	315034	869950	chr6_KI270801v1_alt:315034-869950	1	-	315424	869692	789624	32	444,136,164,126,132,174,150,136,155,117,98,37,18,77,88,185,36,161,139,37,274,106,202,110,303,294,175,116,82,272,123,358,	0,3185,3827,6820,7086,11279,12994,13405,15884,20932,21457,22836,25412,25625,27064,28883,33360,35247,43428,99057,101818,113112,116736,118014,123989,218731,253221,274334,276820,356338,431865,554558,
#Deleted in new
chr6_KI270801v1_alt	315093	869692	chr6_KI270801v1_alt:315093-869692	1	-	315424	869692	0	30	385,136,164,126,132,174,150,136,155,117,98,37,77,88,185,161,136,37,274,106,202,110,303,294,175,116,82,272,123,100,	0,3126,3768,6761,7027,11220,12935,13346,15825,20873,21398,22777,25566,27005,28824,35188,43369,98998,101759,113053,116677,117955,123930,218672,253162,274275,276761,356279,431806,554499,
#Deleted in new
chr6_KI270801v1_alt	315310	869917	chr6_KI270801v1_alt:315310-869917	1	-	315424	869692	789624	34	168,136,164,126,132,174,150,136,155,117,98,37,18,77,88,185,12,36,161,30,139,37,274,106,202,110,303,294,175,116,82,272,123,325,	0,2909,3551,6544,6810,11003,12718,13129,15608,20656,21181,22560,25136,25349,26788,28607,31083,33084,34971,40048,43152,98781,101542,112836,116460,117738,123713,218455,252945,274058,276544,356062,431589,554282,
#Deleted in new
chr6_KI270801v1_alt	335993	358601	chr6_KI270801v1_alt:335993-358601	0	-	335993	358601	789624	10	90,98,37,77,88,185,36,161,30,139,	0,498,1877,4666,6105,7924,12401,14288,19365,22469,
#Deleted in new
chr6_KI270801v1_alt	336057	357410	chr6_KI270801v1_alt:336057-357410	0	-	336057	357410	789624	11	26,98,37,77,88,185,12,36,161,30,32,	0,434,1813,4602,6041,7860,10336,12337,14224,19301,21321,
#Deleted in new
chr6_KI270801v1_alt	345184	869933	chr6_KI270801v1_alt:345184-869933	0	-	345184	345184	8553170	19	344,12,36,161,30,139,37,274,106,202,110,303,294,175,116,82,272,123,341,	0,1209,3210,5097,10174,13278,68907,71668,82962,86586,87864,93839,188581,223071,244184,246670,326188,401715,524408,
#Deleted in new
chr6_KI270801v1_alt	345184	746951	chr6_KI270801v1_alt:345184-746951	0	-	591925	746951	789624	18	344,12,36,161,30,42,139,37,274,106,202,110,303,294,175,116,82,52,	0,1209,3210,5097,10174,12194,13278,68907,71668,82962,86586,87864,93839,188581,223071,244184,246670,401715,
#Deleted in new
chr6_KI270801v1_alt	350174	358505	chr6_KI270801v1_alt:350174-358505	0	-	350174	350174	8553170	2	268,43,	0,8288,
#Deleted in new
chr6_KI270801v1_alt	377219	434582	chr6_KI270801v1_alt:377219-434582	3	+	377219	377219	789624	5	38,120,110,139,345,	0,34816,39601,55785,57018,
#Deleted in new
chr6_KI270801v1_alt	411399	417011	chr6_KI270801v1_alt:411399-417011	0	-	411399	411399	8553170	3	359,37,159,	0,2692,5453,
#Deleted in new
chr6_KI270801v1_alt	412769	869849	chr6_KI270801v1_alt:412769-869849	0	-	412769	412769	8553170	14	90,37,274,106,202,110,303,294,175,116,82,272,123,257,	0,1322,4083,15377,19001,20279,26254,120996,155486,176599,179085,258603,334130,456823,
#Deleted in new
chr6_KI270801v1_alt	533765	590633	chr6_KI270801v1_alt:533765-590633	0	-	533765	533765	8553170	4	294,175,116,77,	0,34490,55603,56791,
#Deleted in new
chr6_KI270801v1_alt	533765	671515	chr6_KI270801v1_alt:533765-671515	0	-	533765	671515	789624	3	294,175,143,	0,34490,137607,
#Deleted in new
chr6_KI270801v1_alt	533906	581485	chr6_KI270801v1_alt:533906-581485	0	-	533906	533906	8553170	4	153,175,134,62,	0,34349,46159,47517,
#Deleted in new
chr6_KI270801v1_alt	568403	841191	chr6_KI270801v1_alt:568403-841191	0	-	568403	568403	8553170	6	27,116,82,272,123,126,	0,20965,23451,102969,178496,272662,
#Deleted in new
chr6_KI270801v1_alt	584713	671507	chr6_KI270801v1_alt:584713-671507	0	-	584713	584713	8553170	4	225,116,82,135,	0,4655,7141,86659,
#Deleted in new
chr6_KI270801v1_alt	670374	869921	chr6_KI270801v1_alt:670374-869921	1	-	671120	869692	789624	3	1270,123,329,	0,76525,199218,
#Deleted in new
chr6_KI270801v1_alt	670736	869899	chr6_KI270801v1_alt:670736-869899	0	-	747006	869692	789624	4	908,123,118,307,	0,76163,170329,198856,
#Deleted in new
chr6_KI270801v1_alt	671584	869933	chr6_KI270801v1_alt:671584-869933	0	-	758646	869692	789624	4	60,123,39,341,	0,75315,87043,198008,
#Deleted in new
chr6_KI270801v1_alt	849860	850510	chr6_KI270801v1_alt:849860-850510	3	+	849860	849860	8553170	2	376,173,	0,477,
#Deleted in new
chr6_KI270801v1_alt	868261	869904	chr6_KI270801v1_alt:868261-869904	0	-	868261	868261	8553170	2	214,312,	0,1331,
#Deleted in new
chr6_KI270802v1_alt	8754	8975	chr6_KI270802v1_alt:8754-8975	7	+	8754	8754	16724991	1	221,	0,
#Deleted in new
chr6_KI270802v1_alt	16389	36368	chr6_KI270802v1_alt:16389-36368	3	+	16389	16389	789624	5	72,1127,89,53,207,	0,5833,17448,18003,19772,
#Deleted in new
chr6_KI270802v1_alt	19710	19914	chr6_KI270802v1_alt:19710-19914	7	-	19710	19710	16724991	1	204,	0,
#Deleted in new
chr6_KI270802v1_alt	54877	56489	chr6_KI270802v1_alt:54877-56489	3	-	54877	54877	8553170	2	484,97,	0,1515,
#Deleted in new
chr6_KN196478v1_fix	13185	13289	chr6_KN196478v1_fix:13185-13289	3	+	13185	13185	8553170	1	104,	0,
#Deleted in new
chr6_KN196478v1_fix	97553	97662	chr6_KN196478v1_fix:97553-97662	3	+	97553	97553	8553170	1	109,	0,
#Deleted in new
chr6_KQ031387v1_fix	117293	117707	chr6_KQ031387v1_fix:117293-117707	7	+	117293	117293	16724991	1	414,	0,
#Deleted in new
chr6_KQ031387v1_fix	215371	215736	chr6_KQ031387v1_fix:215371-215736	7	-	215371	215371	16724991	2	54,309,	0,56,
#Deleted in new
chr6_KQ090016v1_fix	29594	107366	chr6_KQ090016v1_fix:29594-107366	3	-	31036	100098	789624	29	1574,133,72,150,144,93,164,149,113,122,61,118,102,97,38,83,87,603,175,178,124,181,118,171,111,125,97,678,193,	0,2397,3384,11896,21090,21804,24496,26315,30158,30604,31439,32545,34874,40831,41384,41507,42724,44244,46093,47977,50607,53457,54085,55494,57209,61735,64176,70183,77579,
#Deleted in new
chr6_KQ090016v1_fix	29597	100177	chr6_KQ090016v1_fix:29597-100177	0	-	29597	29597	8553170	26	1571,133,72,150,807,164,149,113,122,61,118,102,97,38,83,87,175,178,124,181,118,171,111,125,97,400,	0,2394,3381,11893,21087,24493,26312,30155,30601,31436,32542,34871,40828,41381,41504,42721,46090,47974,50604,53454,54082,55491,57206,61732,64173,70180,
#Deleted in new
chr6_KQ090016v1_fix	29847	33190	chr6_KQ090016v1_fix:29847-33190	0	-	29847	29847	8553170	2	1321,1199,	0,2144,
#Deleted in new
chr6_KQ090016v1_fix	29850	65541	chr6_KQ090016v1_fix:29850-65541	0	-	29850	29850	8553170	13	1318,133,72,150,144,93,117,149,113,122,61,118,1073,	0,2141,3128,11640,20834,21548,24240,26059,29902,30348,31183,32289,34618,
#Deleted in new
chr6_KQ090016v1_fix	29850	107366	chr6_KQ090016v1_fix:29850-107366	1	-	31036	100098	789624	28	1318,133,72,150,144,93,164,149,113,122,61,118,102,97,38,83,87,175,178,124,181,118,171,111,125,97,678,193,	0,2141,3128,11640,20834,21548,24240,26059,29902,30348,31183,32289,34618,40575,41128,41251,42468,45837,47721,50351,53201,53829,55238,56953,61479,63920,69927,77323,
#Deleted in new
chr6_KQ090016v1_fix	30354	107283	chr6_KQ090016v1_fix:30354-107283	0	-	85224	100098	789624	29	814,133,72,150,144,93,164,149,113,122,61,118,102,97,38,83,87,603,175,178,124,181,118,171,139,125,97,678,110,	0,1637,2624,11136,20330,21044,23736,25555,29398,29844,30679,31785,34114,40071,40624,40747,41964,43484,45333,47217,49847,52697,53325,54734,56421,60975,63416,69423,76819,
#Deleted in new
chr6_KQ090016v1_fix	31014	100177	chr6_KQ090016v1_fix:31014-100177	1	-	31036	100098	789624	27	154,133,72,150,144,93,164,149,113,122,61,118,102,97,38,83,87,175,178,124,181,118,171,111,125,97,400,	0,977,1964,10476,19670,20384,23076,24895,28738,29184,30019,31125,33454,39411,39964,40087,41304,44673,46557,49187,52037,52665,54074,55789,60315,62756,68763,
#Deleted in new
chr6_KQ090016v1_fix	31023	100177	chr6_KQ090016v1_fix:31023-100177	1	-	31036	100098	789624	28	145,133,72,150,144,93,164,104,113,122,61,118,102,97,38,83,87,603,175,178,124,181,118,171,111,125,97,400,	0,968,1955,10467,19661,20375,23067,24886,28729,29175,30010,31116,33445,39402,39955,40078,41295,42815,44664,46548,49178,52028,52656,54065,55780,60306,62747,68754,
#Deleted in new
chr6_KQ090016v1_fix	31119	51466	chr6_KQ090016v1_fix:31119-51466	0	-	34589	51466	789624	7	49,133,72,105,150,144,68,	0,872,1859,3390,10371,19565,20279,
#Deleted in new
chr6_KQ090016v1_fix	50942	107366	chr6_KQ090016v1_fix:50942-107366	0	-	50942	50942	8553170	24	549,164,149,113,122,61,118,102,97,38,83,87,603,175,178,124,181,118,171,111,125,97,678,193,	0,3148,4967,8810,9256,10091,11197,13526,19483,20036,20159,21376,22896,24745,26629,29259,32109,32737,34146,35861,40387,42828,48835,56231,
#Deleted in new
chr6_KQ090016v1_fix	69949	70052	chr6_KQ090016v1_fix:69949-70052	3	-	69949	69949	8553170	1	103,	0,
#Deleted in new
chr6_KQ090016v1_fix	133810	134789	chr6_KQ090016v1_fix:133810-134789	7	-	133810	133810	16724991	1	979,	0,
#Deleted in new
chr6_KQ090016v1_fix	233020	237232	chr6_KQ090016v1_fix:233020-237232	1	+	234776	236039	0	3	334,263,2795,	0,440,1417,
#Deleted in new
chr6_KQ090016v1_fix	233445	240643	chr6_KQ090016v1_fix:233445-240643	3	+	234776	236039	0	2	278,6206,	0,992,
#Deleted in new
chr6_KQ090016v1_fix	234058	237232	chr6_KQ090016v1_fix:234058-237232	1	+	234776	236039	0	2	86,2795,	0,379,
#Deleted in new
chr6_KZ208911v1_fix	3106	138106	chr6_KZ208911v1_fix:3106-138106	3	+	19975	137491	8553170	5	172,112,72,93,806,	0,597,16864,129128,134194,
#Deleted in new
chr6_KZ208911v1_fix	3107	137856	chr6_KZ208911v1_fix:3107-137856	0	+	3107	3107	8553170	4	171,112,93,556,	0,596,129127,134193,
#Deleted in new
chr6_KZ208911v1_fix	3109	39591	chr6_KZ208911v1_fix:3109-39591	0	+	3109	3109	8553170	4	169,112,187,77,	0,594,35248,36405,
#Deleted in new
chr6_KZ208911v1_fix	21919	25430	chr6_KZ208911v1_fix:21919-25430	3	-	21919	21919	8553170	2	260,1215,	0,2296,
#Deleted in new
chr6_KZ208911v1_fix	25165	25857	chr6_KZ208911v1_fix:25165-25857	7	+	25165	25165	16724991	1	692,	0,
#Deleted in new
chr6_KZ208911v1_fix	32166	140252	chr6_KZ208911v1_fix:32166-140252	1	+	39795	137491	789624	5	135,187,1206,93,2952,	0,6191,7348,100068,105134,
#Deleted in new
chr6_KZ208911v1_fix	32192	41151	chr6_KZ208911v1_fix:32192-41151	0	+	32192	32192	8553170	3	109,187,1637,	0,6165,7322,
#Deleted in new
chr6_KZ208911v1_fix	32215	137831	chr6_KZ208911v1_fix:32215-137831	0	+	32215	32215	8553170	5	86,187,211,93,531,	0,6142,7299,100019,105085,
#Deleted in new
chr6_KZ208911v1_fix	32234	137500	chr6_KZ208911v1_fix:32234-137500	0	+	32234	32234	8553170	4	67,187,93,200,	0,6123,100000,105066,
#Deleted in new
chr6_KZ208911v1_fix	32303	137441	chr6_KZ208911v1_fix:32303-137441	0	+	32303	32303	8553170	3	175,93,141,	0,99931,104997,
#Deleted in new
chr6_KZ208911v1_fix	32368	132306	chr6_KZ208911v1_fix:32368-132306	0	+	32368	32368	8553170	4	110,187,211,72,	0,5989,7146,99866,
#Deleted in new
chr6_KZ208911v1_fix	38249	40163	chr6_KZ208911v1_fix:38249-40163	0	+	38249	38249	8553170	2	295,649,	0,1265,
#Deleted in new
chr6_KZ208911v1_fix	39239	140251	chr6_KZ208911v1_fix:39239-140251	1	+	39795	137491	789624	3	1481,93,2951,	0,92995,98061,
#Deleted in new
chr6_KZ208911v1_fix	40680	137348	chr6_KZ208911v1_fix:40680-137348	0	+	40680	40680	8553170	4	40,427,93,48,	0,89408,91554,96620,
#Deleted in new
chr6_KZ208911v1_fix	40695	132529	chr6_KZ208911v1_fix:40695-132529	0	+	40695	40695	8553170	2	25,295,	0,91539,
#Deleted in new
chr6_KZ208911v1_fix	66890	140251	chr6_KZ208911v1_fix:66890-140251	1	+	67307	137491	789624	3	1336,93,2951,	0,65344,70410,
#Deleted in new
chr6_KZ208911v1_fix	67307	68877	chr6_KZ208911v1_fix:67307-68877	1	+	67307	68877	8553170	2	923,16,	0,1554,
#Deleted in new
chr6_KZ208911v1_fix	67684	130325	chr6_KZ208911v1_fix:67684-130325	0	+	67684	67684	8553170	2	542,237,	0,62404,
#Deleted in new
chr6_KZ208911v1_fix	85632	86111	chr6_KZ208911v1_fix:85632-86111	7	-	85632	85632	16724991	1	479,	0,
#Deleted in new
chr6_KZ208911v1_fix	96629	140252	chr6_KZ208911v1_fix:96629-140252	1	+	96873	137491	789624	3	1169,93,2952,	0,35605,40671,
#Deleted in new
chr6_KZ208911v1_fix	144645	145579	chr6_KZ208911v1_fix:144645-145579	7	+	144645	144645	16724991	1	934,	0,
#Deleted in new
chr6_KZ208911v1_fix	170381	203744	chr6_KZ208911v1_fix:170381-203744	3	+	170381	170381	8553170	6	109,112,126,66,182,2872,	0,13219,24626,26417,26578,30491,
#Deleted in new
chr6_KZ208911v1_fix	182301	205417	chr6_KZ208911v1_fix:182301-205417	1	-	182339	195735	8553170	5	181,46,75,199,40,	0,11769,13431,15548,23076,
#Deleted in new
chr6_KZ208911v1_fix	182303	205490	chr6_KZ208911v1_fix:182303-205490	1	-	182339	198434	789624	5	179,46,199,82,113,	0,11767,15546,16060,23074,
#Deleted in new
chr6_KZ208911v1_fix	182305	198434	chr6_KZ208911v1_fix:182305-198434	1	-	182339	198434	789624	4	177,46,199,71,	0,11765,15544,16058,
#Deleted in new
chr6_KZ208911v1_fix	182305	205681	chr6_KZ208911v1_fix:182305-205681	3	-	182339	195735	5263520	6	177,90,46,75,199,95,	0,1125,11765,13427,15544,23281,
#Deleted in new
chr6_KZ208911v1_fix	182305	205417	chr6_KZ208911v1_fix:182305-205417	0	-	182305	182305	8553170	4	177,46,82,40,	0,11765,16058,23072,
#Deleted in new
chr6_KZ208911v1_fix	182305	205493	chr6_KZ208911v1_fix:182305-205493	1	-	182339	197858	789624	4	177,46,91,116,	0,11765,15544,23072,
#Deleted in new
chr6_KZ208911v1_fix	185541	185652	chr6_KZ208911v1_fix:185541-185652	3	-	185541	185541	8553170	1	111,	0,
#Deleted in new
chr6_KZ208911v1_fix	205578	220666	chr6_KZ208911v1_fix:205578-220666	3	+	205869	220336	789624	10	375,163,121,75,53,146,98,100,124,545,	0,2629,7674,7870,8710,9812,10052,12720,14258,14543,
#Deleted in new
chr6_KZ208911v1_fix	233798	242003	chr6_KZ208911v1_fix:233798-242003	3	+	235497	241550	0	6	327,78,77,102,88,505,	0,1641,2046,2992,5725,7700,
#Deleted in new
chr6_KZ208911v1_fix	233858	242013	chr6_KZ208911v1_fix:233858-242013	1	+	235497	241550	0	6	267,64,77,102,88,515,	0,1595,1986,2932,5665,7640,
#Deleted in new
chr6_KZ208911v1_fix	233992	241647	chr6_KZ208911v1_fix:233992-241647	0	+	233992	233992	8553170	4	133,102,88,149,	0,2798,5531,7506,
#Deleted in new
chr6_KZ208911v1_fix	234008	242013	chr6_KZ208911v1_fix:234008-242013	0	+	234008	234008	8553170	5	117,77,102,88,515,	0,1836,2782,5515,7490,
#Deleted in new
chr6_KZ208911v1_fix	235305	239611	chr6_KZ208911v1_fix:235305-239611	0	+	235305	235305	8553170	4	212,77,102,88,	0,539,1485,4218,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	12703	27199	chr7:12703-27199	3	+	12703	12703	8553170	2	119,235,	0,14261,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	19618	35457	chr7:19618-35457	3	-	19618	19618	8553170	4	277,196,547,123,	0,1215,11441,15716,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	24313	27234	chr7:24313-27234	0	+	24313	24313	8553170	2	52,270,	0,2651,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	31389	35489	chr7:31389-35489	0	-	31389	31389	8553170	3	217,112,155,	0,2291,3945,
#Deleted in new
chr7	37031	37477	chr7:37031-37477	7	+	37031	37031	16724991	1	446,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	70971	95683	chr7:70971-95683	3	-	70971	70971	8553170	3	600,157,120,	0,705,24592,
#Partially deleted in new
chr7	77037	81178	chr7:77037-81178	3	+	77037	77037	8553170	2	316,1049,	0,3092,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	135852	149362	chr7:135852-149362	1	-	135852	135852	8553170	4	419,122,87,34,	0,9441,12679,13476,
#Deleted in new
chr7	144443	145430	chr7:144443-145430	0	-	144443	144443	8553170	2	368,137,	0,850,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	149570	154904	chr7:149570-154904	1	+	149570	149570	8553170	4	562,185,107,1496,	0,2240,2870,3838,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	149596	155465	chr7:149596-155465	3	+	149596	149596	789624	2	2951,2057,	0,3812,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	149730	153490	chr7:149730-153490	0	+	149730	149730	8553170	3	402,107,82,	0,2710,3678,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	149777	153938	chr7:149777-153938	0	+	149777	149777	8553170	2	355,530,	0,3631,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	152678	153823	chr7:152678-153823	0	+	152678	152678	8553170	2	141,412,	0,733,
#Deleted in new
chr7	161764	164972	chr7:161764-164972	3	-	161764	161764	8553170	1	3208,	0,
#Deleted in new
chr7	174919	176013	chr7:174919-176013	3	+	174919	174919	789624	3	365,109,94,	0,744,1000,
#Partially deleted in new
chr7	182934	194180	chr7:182934-194180	3	-	182934	182934	8553170	3	174,167,233,	0,713,11013,
#Partially deleted in new
chr7	192968	260745	chr7:192968-260745	3	+	193199	259980	0	10	836,179,79,93,116,181,110,82,60,1015,	0,2585,15929,53446,55346,62880,63685,64036,65677,66762,
#Partially deleted in new
chr7	195241	208976	chr7:195241-208976	0	+	195241	195241	8553170	3	86,179,79,	0,312,13656,
#Deleted in new
chr7	195624	197575	chr7:195624-197575	0	+	195624	195624	8553170	2	108,446,	0,1505,
#Deleted in new
chr7	227553	229557	chr7:227553-229557	3	-	227553	227553	8553170	1	2004,	0,
#Partially deleted in new
chr7	245894	260745	chr7:245894-260745	0	+	245894	245894	8553170	7	613,116,181,110,82,60,1015,	0,2420,9954,10759,11110,12751,13836,
#Deleted in new
chr7	256194	257453	chr7:256194-257453	0	+	256194	256194	8553170	2	569,449,	0,810,
#Deleted in new
chr7	290169	291488	chr7:290169-291488	3	+	290169	291488	789624	3	107,169,426,	0,483,893,
#Deleted in new
chr7	291343	294422	chr7:291343-294422	0	+	291343	291488	789624	2	340,190,	0,2889,
#Deleted in new
chr7	379358	382712	chr7:379358-382712	3	+	379358	379358	789624	3	185,97,1864,	0,1059,1490,
#Partially deleted in new
chr7	484106	496118	chr7:484106-496118	3	-	484106	484106	8553170	3	93,113,214,	0,10737,11798,
#Partially deleted in new
chr7	497257	519409	chr7:497257-519409	3	-	498563	519001	0	6	1317,127,188,105,97,471,	0,3858,13551,15093,20136,21681,
#Partially deleted in new
chr7	498308	519394	chr7:498308-519394	1	-	500443	519001	0	7	266,69,127,188,105,97,456,	0,2122,2807,12500,14042,19085,20630,
#Partially deleted in new
chr7	498492	518508	chr7:498492-518508	0	-	498563	518508	789624	6	82,127,188,105,97,90,	0,2623,12316,13858,18901,19926,
#Partially deleted in new
chr7	500777	513467	chr7:500777-513467	0	-	500777	500777	8553170	3	465,188,1117,	0,10031,11573,
#Deleted in new
chr7	512356	520296	chr7:512356-520296	0	-	512356	519001	789624	4	99,97,130,337,	0,5037,6582,7603,
#Deleted in new
chr7	512444	520208	chr7:512444-520208	0	-	512444	512444	8553170	3	11,97,249,	0,4949,7515,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	520390	525232	chr7:520390-525232	3	+	520390	520390	789624	3	2926,201,379,	0,3689,4463,
#Partially deleted in new
chr7	549196	727341	chr7:549196-727341	3	-	550429	711505	0	11	1406,82,122,61,159,47,62,92,171,199,132,	0,2192,30059,35311,46949,56996,58194,128032,131359,162132,178013,
#Partially deleted in new
chr7	549196	712940	chr7:549196-712940	1	-	550429	711505	0	11	1406,82,122,61,159,47,62,92,171,199,93,	0,2192,30059,35311,46949,56996,58194,128032,131359,162132,163651,
#Partially deleted in new
chr7	549197	713207	chr7:549197-713207	1	-	550429	711505	0	11	1405,82,122,61,159,47,62,92,171,199,153,	0,2191,30058,35310,46948,56995,58193,128031,131358,162131,163857,
#Partially deleted in new
chr7	549741	727650	chr7:549741-727650	1	-	550429	711505	0	11	861,82,122,61,159,47,62,92,171,199,61,	0,1647,29514,34766,46404,56451,57649,127487,130814,161587,177848,
#Partially deleted in new
chr7	549749	712572	chr7:549749-712572	1	-	550429	711505	0	11	853,82,122,61,159,47,62,92,171,199,159,	0,1639,29506,34758,46396,56443,57641,127479,130806,161579,162664,
#Partially deleted in new
chr7	550269	602683	chr7:550269-602683	0	-	550429	602683	789624	6	333,82,122,61,159,131,	0,1119,28986,34238,45876,52283,
#Deleted in new
chr7	561957	565619	chr7:561957-565619	3	+	561957	561957	789624	2	53,519,	0,3143,
#Partially deleted in new
chr7	579255	712940	chr7:579255-712940	0	-	579255	711505	789624	9	122,61,159,47,62,92,171,199,93,	0,5252,16890,26937,28135,97973,101300,132073,133592,
#Partially deleted in new
chr7	596179	691794	chr7:596179-691794	0	-	596179	691551	789624	6	125,47,62,92,171,255,	0,10013,11211,81049,84376,95360,
#Partially deleted in new
chr7	603184	608482	chr7:603184-608482	3	+	603184	603184	8553170	2	113,618,	0,4680,
#Partially deleted in new
chr7	607395	727341	chr7:607395-727341	0	-	607395	711505	789624	5	57,92,171,199,132,	0,69833,73160,103933,119814,
#Partially deleted in new
chr7	680555	713069	chr7:680555-713069	0	-	680555	711505	789624	3	171,199,148,	0,30773,32366,
#Partially deleted in new
chr7	696712	727237	chr7:696712-727237	0	-	696712	696712	8553170	3	390,199,28,	0,14616,30497,
#Partially deleted in new
chr7	716618	726977	chr7:716618-726977	0	-	716618	716618	8553170	2	228,374,	0,9985,
#Partially deleted in new
chr7	726700	786475	chr7:726700-786475	3	+	726720	785653	789624	13	615,185,125,119,233,213,144,169,148,151,157,192,959,	0,2962,14118,14646,27888,30081,35052,37105,43770,47347,48305,53252,58816,
#Partially deleted in new
chr7	727218	756792	chr7:727218-756792	0	+	727218	756792	789624	5	97,125,119,233,11,	0,13600,14128,27370,29563,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	727251	750953	chr7:727251-750953	0	+	727251	727251	8553170	5	64,185,125,119,86,	0,2411,13567,14095,23616,
#Partially deleted in new
chr7	727254	786031	chr7:727254-786031	0	+	727254	785653	789624	13	61,123,125,119,233,213,144,169,148,151,157,192,515,	0,2470,13564,14092,27334,29527,34498,36551,43216,46793,47751,52698,58262,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	763906	772975	chr7:763906-772975	0	+	763906	763906	8553170	2	68,2505,	0,6564,
#Partially deleted in new
chr7	768474	786044	chr7:768474-786044	1	+	769147	785653	789624	6	731,148,151,157,192,528,	0,1996,5573,6531,11478,17042,
#Deleted in new
chr7	778181	779984	chr7:778181-779984	0	+	778181	778181	8553170	2	504,32,	0,1771,
#Partially deleted in new
chr7	779903	785573	chr7:779903-785573	0	+	779903	779903	8553170	2	241,57,	0,5613,
#Partially deleted in new
chr7	816614	874902	chr7:816614-874902	3	+	838870	873331	789624	18	59,189,185,27,180,94,59,143,210,87,44,130,255,85,116,168,93,1688,	0,22183,25331,26591,26726,35335,35994,36195,36794,38305,39743,41213,43513,44765,49337,52734,55855,56600,
#Partially deleted in new
chr7	816614	842568	chr7:816614-842568	0	+	816614	816614	8553170	4	59,189,185,87,	0,22183,25331,25867,
#Partially deleted in new
chr7	816614	843006	chr7:816614-843006	0	+	816614	816614	8553170	5	59,97,189,185,40,	0,15890,22183,25331,26352,
#Partially deleted in new
chr7	816614	874920	chr7:816614-874920	1	+	832524	873331	789624	17	59,97,189,185,94,59,140,210,87,44,130,255,85,116,168,93,1706,	0,15890,22183,25331,35335,35994,36198,36794,38305,39743,41213,43513,44765,49337,52734,55855,56600,
#Partially deleted in new
chr7	816614	843872	chr7:816614-843872	1	+	817456	843636	789624	7	59,220,97,189,185,27,532,	0,665,15890,22183,25331,26591,26726,
#Partially deleted in new
chr7	816622	843385	chr7:816622-843385	0	+	832524	843385	789624	7	51,82,97,189,185,27,45,	0,15397,15882,22175,25323,26583,26718,
#Partially deleted in new
chr7	816642	838986	chr7:816642-838986	0	+	832524	838986	789624	4	31,220,97,189,	0,637,15862,22155,
#Partially deleted in new
chr7	816754	842086	chr7:816754-842086	0	+	832524	842086	789624	5	117,82,97,189,141,	0,15265,15750,22043,25191,
#Partially deleted in new
chr7	816865	838986	chr7:816865-838986	0	+	832524	838986	789624	5	45,220,82,97,189,	0,414,15154,15639,21932,
#Partially deleted in new
chr7	830929	842035	chr7:830929-842035	0	+	832524	842035	789624	5	105,82,97,189,90,	0,1090,1575,7868,11016,
#Partially deleted in new
chr7	831921	842019	chr7:831921-842019	0	+	832524	842019	789624	4	180,97,189,74,	0,583,6876,10024,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	832500	850767	chr7:832500-850767	0	+	832500	832500	8553170	7	101,189,185,27,180,198,1248,	0,6297,9445,10705,10840,15917,17019,
#Partially deleted in new
chr7	832500	874902	chr7:832500-874902	1	+	832524	873331	789624	19	101,189,185,27,180,99,94,59,143,210,87,44,130,255,85,116,168,93,1688,	0,6297,9445,10705,10840,18883,19449,20108,20309,20908,22419,23857,25327,27627,28879,33451,36848,39969,40714,
#Partially deleted in new
chr7	832500	874900	chr7:832500-874900	1	+	832524	873331	789624	20	101,189,185,27,180,111,99,94,59,143,210,87,44,130,255,85,116,168,93,1686,	0,6297,9445,10705,10840,17422,18883,19449,20108,20309,20908,22419,23857,25327,27627,28879,33451,36848,39969,40714,
#Partially deleted in new
chr7	832500	874902	chr7:832500-874902	0	+	832500	832500	8553170	21	101,189,185,27,180,198,84,111,99,94,344,210,87,44,130,255,85,116,168,93,1688,	0,6297,9445,10705,10840,15917,17019,17422,18883,19449,20108,20908,22419,23857,25327,27627,28879,33451,36848,39969,40714,
#Partially deleted in new
chr7	832502	843818	chr7:832502-843818	1	+	832524	843636	789624	5	99,189,185,27,478,	0,6295,9443,10703,10838,
#Partially deleted in new
chr7	832504	874920	chr7:832504-874920	1	+	838870	873331	789624	18	97,189,185,27,180,94,59,143,210,87,44,130,255,85,116,168,93,1706,	0,6293,9441,10701,10836,19445,20104,20305,20904,22415,23853,25323,27623,28875,33447,36844,39965,40710,
#Partially deleted in new
chr7	832504	843834	chr7:832504-843834	0	+	832504	832504	8553170	5	97,189,185,27,494,	0,6293,9441,10701,10836,
#Partially deleted in new
chr7	832506	839180	chr7:832506-839180	0	+	832506	832506	8553170	2	95,383,	0,6291,
#Partially deleted in new
chr7	832954	842073	chr7:832954-842073	0	+	832954	832954	8553170	3	275,189,128,	0,5843,8991,
#Partially deleted in new
chr7	838795	852651	chr7:838795-852651	0	+	838795	852651	789624	4	191,185,94,43,	0,3150,13154,13813,
#Partially deleted in new
chr7	841815	848421	chr7:841815-848421	0	+	841815	841815	8553170	4	315,27,180,4,	0,1390,1525,6602,
#Deleted in new
chr7	841911	843669	chr7:841911-843669	0	+	841911	841911	8553170	3	219,27,329,	0,1294,1429,
#Partially deleted in new
chr7	842920	848494	chr7:842920-848494	0	+	842920	842920	8553170	3	312,180,77,	0,420,5497,
#Partially deleted in new
chr7	843340	851481	chr7:843340-851481	0	+	843340	851481	789624	4	180,84,111,98,	0,6179,6582,8043,
#Partially deleted in new
chr7	843369	874899	chr7:843369-874899	0	+	843369	873331	789624	17	151,198,84,99,94,59,143,210,87,44,130,255,85,116,168,93,1685,	0,5048,6150,8014,8580,9239,9440,10039,11550,12988,14458,16758,18010,22582,25979,29100,29845,
#Partially deleted in new
chr7	848607	874902	chr7:848607-874902	0	+	848607	873331	789624	17	8,84,111,99,94,59,143,210,87,44,130,255,85,116,168,93,1688,	0,912,1315,2776,3342,4001,4202,4801,6312,7750,9220,11520,12772,17344,20741,23862,24607,
#Partially deleted in new
chr7	849800	852907	chr7:849800-852907	0	+	849800	849800	8553170	5	233,99,94,59,95,	0,1583,2149,2808,3012,
#Partially deleted in new
chr7	849816	852878	chr7:849816-852878	0	+	849816	849816	8553170	4	217,99,94,270,	0,1567,2133,2792,
#Deleted in new
chr7	851166	852824	chr7:851166-852824	0	+	851166	851166	8553170	3	316,94,216,	0,783,1442,
#Deleted in new
chr7	851549	852773	chr7:851549-852773	0	+	851549	851549	8553170	2	494,165,	0,1059,
#Partially deleted in new
chr7	851949	896435	chr7:851949-896435	0	+	851949	886639	789624	17	94,59,140,210,44,130,255,85,116,79,82,150,139,141,76,73,1102,	0,659,863,1459,4408,5878,8178,9430,14002,34106,34619,35420,38978,40328,41790,41949,43384,
#Deleted in new
chr7	852191	852902	chr7:852191-852902	0	+	852191	852191	8553170	2	476,93,	0,618,
#Partially deleted in new
chr7	852246	874902	chr7:852246-874902	0	+	852246	852246	8553170	10	1372,87,44,130,255,85,116,168,93,1688,	0,2673,4111,5581,7881,9133,13705,17102,20223,20968,
#Partially deleted in new
chr7	868473	874902	chr7:868473-874902	0	+	868473	868473	8553170	3	1043,93,1688,	0,3996,4741,
#Partially deleted in new
chr7	876551	896434	chr7:876551-896434	3	+	876645	895422	0	9	249,79,82,150,139,141,76,73,1101,	0,9504,10017,10818,14376,15726,17188,17347,18782,
#Partially deleted in new
chr7	877904	891066	chr7:877904-891066	0	+	886059	891066	789624	5	423,79,82,150,139,	0,8151,8664,9465,13023,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	879789	886547	chr7:879789-886547	3	-	879789	879789	8553170	1	6758,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	883542	896436	chr7:883542-896436	1	+	886059	895422	0	8	2592,82,150,139,141,76,73,1103,	0,3026,3827,7385,8735,10197,10356,11791,
#Partially deleted in new
chr7	884023	887519	chr7:884023-887519	0	+	884203	887519	789624	4	371,79,82,150,	0,2032,2545,3346,
#Deleted in new
chr7	887032	891054	chr7:887032-891054	0	+	887058	891054	789624	3	225,150,127,	0,337,3895,
#Deleted in new
chr7	887485	892474	chr7:887485-892474	0	+	887485	887485	8553170	3	34,139,197,	0,3442,4792,
#Deleted in new
chr7	892299	895658	chr7:892299-895658	0	+	892299	892299	8553170	3	119,232,325,	0,1440,3034,
#Partially deleted in new
chr7	897900	927216	chr7:897900-927216	1	-	898920	926641	0	10	1049,229,72,63,84,147,113,83,92,161,	0,1132,1518,2201,2632,6225,7159,22067,28652,29155,
#Partially deleted in new
chr7	897900	955407	chr7:897900-955407	1	-	898920	955407	0	11	1049,229,72,63,84,147,113,83,92,131,115,	0,1132,1518,2201,2632,6225,7159,22067,28652,37474,57392,
#Partially deleted in new
chr7	897900	945816	chr7:897900-945816	1	-	898920	926641	0	11	1049,229,72,63,84,147,113,83,92,131,55,	0,1132,1518,2201,2632,6225,7159,22067,28652,37474,47861,
#Partially deleted in new
chr7	897900	920889	chr7:897900-920889	1	-	898920	920803	789624	9	1049,229,72,63,84,147,113,83,106,	0,1132,1518,2201,2632,6225,7159,22067,22883,
#Partially deleted in new
chr7	897902	954697	chr7:897902-954697	3	-	898920	954477	0	11	1047,229,72,63,84,147,113,83,92,131,302,	0,1130,1516,2199,2630,6223,7157,22065,28650,37472,56493,
#Partially deleted in new
chr7	897902	954697	chr7:897902-954697	1	-	898920	954477	8553170	11	1047,229,72,63,81,147,113,83,92,131,302,	0,1130,1516,2199,2630,6223,7157,22065,28650,37472,56493,
#Partially deleted in new
chr7	897908	927216	chr7:897908-927216	0	-	898920	927216	789624	10	1041,229,72,63,84,147,113,83,92,161,	0,1124,1510,2193,2624,6217,7151,22059,28644,29147,
#Partially deleted in new
chr7	897909	905616	chr7:897909-905616	0	-	897909	897909	8553170	7	1040,229,72,63,84,147,557,	0,1123,1509,2192,2623,6216,7150,
#Deleted in new
chr7	897944	901399	chr7:897944-901399	0	-	897944	897944	8553170	5	1005,229,72,63,867,	0,1088,1474,2157,2588,
#Partially deleted in new
chr7	898777	975549	chr7:898777-975549	0	-	926600	975509	789624	12	172,229,72,63,84,147,113,83,92,131,112,122,	0,255,641,1324,1755,5348,6282,21190,27775,36597,74403,76650,
#Partially deleted in new
chr7	898916	905077	chr7:898916-905077	0	-	898920	905077	789624	8	33,229,72,63,84,96,147,18,	0,116,502,1185,1616,2019,5209,6143,
#Partially deleted in new
chr7	899464	920889	chr7:899464-920889	0	-	899464	920889	789624	7	26,63,84,147,113,83,106,	0,637,1068,4661,5595,20503,21319,
#Partially deleted in new
chr7	900141	935180	chr7:900141-935180	0	-	900141	935180	789624	7	23,84,147,113,83,92,34,	0,391,3984,4918,19826,26411,35005,
#Partially deleted in new
chr7	900532	927514	chr7:900532-927514	0	-	900532	927514	789624	6	84,147,113,83,92,41,	0,3593,4527,19435,26020,26941,
#Deleted in new
chr7	903956	905138	chr7:903956-905138	0	-	903956	903956	8553170	2	316,79,	0,1103,
#Partially deleted in new
chr7	904151	945816	chr7:904151-945816	0	-	904151	904151	8553170	6	121,113,83,92,131,55,	0,908,15816,22401,31223,41610,
#Partially deleted in new
chr7	904186	955350	chr7:904186-955350	0	-	904186	904186	8553170	6	86,113,83,92,131,74,	0,873,15781,22366,31188,51090,
#Partially deleted in new
chr7	904246	955406	chr7:904246-955406	0	-	904246	955335	789624	6	26,113,83,92,131,114,	0,813,15721,22306,31128,51046,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	904246	923338	chr7:904246-923338	0	-	904246	904246	8553170	4	26,113,83,362,	0,813,15721,18730,
#Partially deleted in new
chr7	919967	927055	chr7:919967-927055	0	-	919967	919967	8553170	2	83,503,	0,6585,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	966074	975599	chr7:966074-975599	3	-	969377	975509	789624	3	3382,112,172,	0,7106,9353,
#Partially deleted in new
chr7	972700	975549	chr7:972700-975549	0	-	972700	972700	8553170	2	592,122,	0,2727,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	972941	975116	chr7:972941-975116	0	-	972941	972941	8553170	2	351,210,	0,1965,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	983198	989640	chr7:983198-989640	3	+	983211	988822	789624	9	187,163,150,158,174,139,185,142,1006,	0,1213,1751,1967,3425,3908,4148,5078,5436,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	983357	989640	chr7:983357-989640	1	+	983379	988528	789624	8	28,163,150,158,174,139,185,1364,	0,1054,1592,1808,3266,3749,3989,4919,
#Partially deleted in new
chr7	986400	987275	chr7:986400-987275	0	+	986400	986400	8553170	2	397,169,	0,706,
#Partially deleted in new
chr7	986413	987380	chr7:986413-987380	0	+	986413	986413	8553170	3	384,139,34,	0,693,933,
#Partially deleted in new
chr7	986656	988804	chr7:986656-988804	0	+	986656	988781	789624	5	141,139,185,142,283,	0,450,690,1620,1865,
#Partially deleted in new
chr7	996985	1138257	chr7:996985-1138257	3	-	997624	1127385	789624	5	819,82,194,130,69,	0,3484,12964,130271,141203,
#Partially deleted in new
chr7	996986	1138257	chr7:996986-1138257	1	-	997624	1127385	789624	5	818,82,194,130,40,	0,3483,12963,130270,141231,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	997005	1138240	chr7:997005-1138240	1	-	997624	1127385	789624	5	799,82,194,130,926,	0,3464,12944,130251,140309,
#Partially deleted in new
chr7	997015	1028339	chr7:997015-1028339	0	-	997624	1028339	789624	4	789,82,194,82,	0,3454,12934,31242,
#Partially deleted in new
chr7	997493	1127388	chr7:997493-1127388	0	-	997493	997493	8553170	5	311,82,194,134,132,	0,2976,12456,111834,129763,
#Partially deleted in new
chr7	997606	1055306	chr7:997606-1055306	0	-	997624	1055306	789624	4	198,82,194,33,	0,2863,12343,57667,
#Partially deleted in new
chr7	997632	1138260	chr7:997632-1138260	0	-	997632	1127385	789624	5	172,82,194,130,43,	0,2837,12317,129624,140585,
#Deleted in new
chr7	1022932	1023026	chr7:1022932-1023026	3	-	1022932	1022932	5263520	1	94,	0,
#Deleted in new
chr7	1024501	1028352	chr7:1024501-1028352	0	-	1024501	1024501	789624	2	2526,95,	0,3756,
#Partially deleted in new
chr7	1029024	1043891	chr7:1029024-1043891	3	+	1029024	1029024	8553170	2	62,473,	0,14394,
#Partially deleted in new
chr7	1044575	1058461	chr7:1044575-1058461	0	+	1057515	1058461	789624	2	83,970,	0,12916,
#Deleted in new
chr7	1044604	1045816	chr7:1044604-1045816	0	+	1044604	1044604	8553170	2	54,480,	0,732,
#Deleted in new
chr7	1055278	1056552	chr7:1055278-1056552	0	+	1055278	1055278	8553170	2	205,449,	0,825,
#Deleted in new
chr7	1055284	1059261	chr7:1055284-1059261	3	+	1057515	1058517	789624	2	199,1770,	0,2207,
#Deleted in new
chr7	1055359	1059261	chr7:1055359-1059261	3	-	1055359	1055359	8553170	2	65,1497,	0,2405,
#Deleted in new
chr7	1056656	1057631	chr7:1056656-1057631	0	+	1057515	1057631	789624	2	173,140,	0,835,
#Partially deleted in new
chr7	1074449	1078036	chr7:1074449-1078036	3	+	1074449	1074449	8553170	3	325,271,273,	0,1491,3314,
#Deleted in new
chr7	1080862	1082178	chr7:1080862-1082178	3	+	1080862	1080862	8553170	2	61,241,	0,1075,
#Partially deleted in new
chr7	1082207	1092881	chr7:1082207-1092881	3	+	1091728	1092856	789624	2	67,1475,	0,9199,
#Partially deleted in new
chr7	1086806	1093815	chr7:1086806-1093815	1	+	1091728	1092856	789624	3	438,124,2409,	0,1391,4600,
#Partially deleted in new
chr7	1086806	1091949	chr7:1086806-1091949	0	+	1091728	1091949	789624	3	438,124,543,	0,1391,4600,
#Partially deleted in new
chr7	1086875	1093815	chr7:1086875-1093815	1	+	1091728	1092856	789624	2	369,2409,	0,4531,
#Partially deleted in new
chr7	1088086	1093810	chr7:1088086-1093810	1	+	1091728	1092856	789624	2	235,2404,	0,3320,
#Deleted in new
chr7	1091627	1093809	chr7:1091627-1093809	1	+	1091728	1093237	789624	2	1015,885,	0,1297,
#Deleted in new
chr7	1092937	1093741	chr7:1092937-1093741	1	+	1092937	1093701	789624	2	252,319,	0,485,
#Partially deleted in new
chr7	1152070	1160178	chr7:1152070-1160178	1	-	1152235	1158212	789624	6	274,152,132,95,100,215,	0,1002,3382,5585,6087,7893,
#Partially deleted in new
chr7	1152906	1160178	chr7:1152906-1160178	3	-	1153068	1158212	789624	5	318,132,95,100,215,	0,2546,4749,5251,7057,
#Partially deleted in new
chr7	1152906	1160153	chr7:1152906-1160153	0	-	1152906	1158212	789624	5	335,132,95,100,190,	0,2546,4749,5251,7057,
#Partially deleted in new
chr7	1152907	1155677	chr7:1152907-1155677	0	-	1152907	1152907	8553170	2	317,225,	0,2545,
#Partially deleted in new
chr7	1152907	1157732	chr7:1152907-1157732	0	-	1153068	1157732	789624	3	224,132,77,	0,2545,4748,
#Deleted in new
chr7	1157022	1160219	chr7:1157022-1160219	0	-	1157022	1157022	8553170	3	728,100,256,	0,1135,2941,
#Deleted in new
chr7	1160025	1160759	chr7:1160025-1160759	0	-	1160025	1160025	8553170	2	459,98,	0,636,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	1160373	1165267	chr7:1160373-1165267	3	+	1160373	1160373	789624	3	250,44,1107,	0,3078,3787,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	1160493	1164575	chr7:1160493-1164575	0	+	1160493	1160493	8553170	2	130,415,	0,3667,
#Deleted in new
chr7	1232906	1237318	chr7:1232906-1237318	3	+	1233017	1236977	789624	3	385,176,1487,	0,613,2925,
#Partially deleted in new
chr7	1267352	1269267	chr7:1267352-1269267	3	+	1267352	1267352	8553170	2	127,306,	0,1609,
#Partially deleted in new
chr7	1428464	1437611	chr7:1428464-1437611	0	-	1428464	1428464	8553170	2	327,77,	0,9070,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	1428478	1439431	chr7:1428478-1439431	0	-	1428478	1428478	8553170	3	313,867,1542,	0,8263,9411,
#Partially deleted in new
chr7	1428618	1459365	chr7:1428618-1459365	0	-	1428618	1428618	8553170	16	173,938,115,74,91,124,65,156,161,1894,777,116,191,142,49,182,	0,5591,8123,8916,9271,9478,9670,10221,11306,11972,16033,18094,18956,20001,21621,30565,
#Partially deleted in new
chr7	1434358	1440022	chr7:1434358-1440022	0	-	1434358	1434358	8553170	2	541,98,	0,5566,
#Partially deleted in new
chr7	1434359	1441524	chr7:1434359-1441524	0	-	1434359	1434359	8553170	10	313,47,115,74,91,124,65,156,161,934,	0,741,2382,3175,3530,3737,3929,4480,5565,6231,
#Partially deleted in new
chr7	1434365	1459502	chr7:1434365-1459502	3	-	1434595	1459326	789624	17	307,47,115,74,91,124,65,156,161,94,293,777,116,191,142,49,319,	0,735,2376,3169,3524,3731,3923,4474,5559,6225,7826,10286,12347,13209,14254,15874,24818,
#Partially deleted in new
chr7	1434365	1450536	chr7:1434365-1450536	0	-	1438302	1450305	789624	16	307,47,115,74,91,124,65,152,161,94,293,777,116,191,142,297,	0,735,2376,3169,3524,3731,3923,4474,5559,6225,7826,10286,12347,13209,14254,15874,
#Partially deleted in new
chr7	1434365	1437913	chr7:1434365-1437913	0	-	1434365	1434365	8553170	5	307,47,115,175,24,	0,735,2376,3068,3524,
#Partially deleted in new
chr7	1434365	1438962	chr7:1434365-1438962	0	-	1434365	1434365	8553170	7	307,115,74,91,124,65,123,	0,2376,3169,3524,3731,3923,4474,
#Partially deleted in new
chr7	1434365	1439871	chr7:1434365-1439871	0	-	1434365	1434365	8553170	8	307,47,115,74,91,124,65,1032,	0,735,2376,3169,3524,3731,3923,4474,
#Partially deleted in new
chr7	1436742	1439158	chr7:1436742-1439158	0	-	1436742	1436742	8553170	4	114,74,257,319,	0,792,1354,2097,
#Deleted in new
chr7	1437535	1438465	chr7:1437535-1438465	0	-	1437535	1437535	8553170	3	73,91,369,	0,354,561,
#Deleted in new
chr7	1438924	1440727	chr7:1438924-1440727	0	-	1438924	1438924	8553170	2	71,803,	0,1000,
#Deleted in new
chr7	1445070	1447952	chr7:1445070-1447952	0	-	1445070	1445070	8553170	3	358,116,378,	0,1642,2504,
#Deleted in new
chr7	1446656	1448033	chr7:1446656-1448033	0	-	1446656	1446656	8553170	2	172,459,	0,918,
#Partially deleted in new
chr7	1459936	1464008	chr7:1459936-1464008	3	+	1459936	1459936	8553170	2	331,167,	0,3905,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	1464496	1467522	chr7:1464496-1467522	3	-	1464496	1464496	8553170	1	3026,	0,
#Partially deleted in new
chr7	1470276	1504367	chr7:1470276-1504367	3	-	1470576	1503960	789624	48	416,110,92,71,114,113,128,193,134,124,227,88,125,124,184,141,160,255,125,99,147,162,112,168,105,180,150,180,130,198,61,92,97,158,78,121,109,177,142,146,187,106,160,138,197,291,99,45,	0,569,856,1294,1996,2795,3289,3891,4428,5671,5952,6293,6517,7273,7476,8089,8449,9153,10040,10558,11065,12269,13465,13726,14821,15013,16348,16645,17043,17483,19067,19314,22733,23477,24539,25156,25879,26861,28135,28430,28698,28978,29196,29607,29893,32624,33626,34046,
#Deleted in new
chr7	1470477	1473125	chr7:1470477-1473125	0	-	1470477	1470477	8553170	6	234,110,92,71,114,54,	0,368,655,1093,1795,2594,
#Deleted in new
chr7	1471132	1473150	chr7:1471132-1473150	0	-	1471132	1473150	789624	4	92,71,144,79,	0,438,1110,1939,
#Deleted in new
chr7	1471170	1471761	chr7:1471170-1471761	0	-	1471170	1471170	8553170	2	54,191,	0,400,
#Partially deleted in new
chr7	1474199	1476150	chr7:1474199-1476150	0	-	1474199	1474199	8553170	3	161,134,203,	0,505,1748,
#Partially deleted in new
chr7	1482277	1493867	chr7:1482277-1493867	0	-	1482277	1482277	8553170	12	1576,168,105,180,150,180,130,198,61,92,97,114,	0,1725,2820,3012,4347,4644,5042,5482,7066,7313,10732,11476,
#Deleted in new
chr7	1494455	1496212	chr7:1494455-1496212	0	-	1494455	1494455	8553170	4	165,78,121,57,	0,360,977,1700,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	1499527	1501279	chr7:1499527-1501279	0	-	1499527	1499527	8553170	4	105,138,197,388,	0,356,642,1364,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	1508654	1509427	chr7:1508654-1509427	3	-	1508654	1508654	8553170	2	119,123,	0,650,
#Partially deleted in new
chr7	1530713	1543043	chr7:1530713-1543043	3	+	1539192	1540375	789624	3	185,80,3103,	0,8435,9227,
#Deleted in new
chr7	1537486	1542686	chr7:1537486-1542686	0	+	1539192	1540375	789624	4	971,80,1334,388,	0,1662,2454,4812,
#Deleted in new
chr7	1538707	1540373	chr7:1538707-1540373	0	+	1539192	1540373	789624	3	119,80,433,	0,441,1233,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	1542234	1556430	chr7:1542234-1556430	3	-	1546951	1555484	789624	9	4947,198,170,92,76,91,166,219,317,	0,5507,6284,7619,7888,8070,8582,13031,13879,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	1543813	1556183	chr7:1543813-1556183	0	-	1549920	1555484	789624	8	3368,198,170,92,91,166,219,70,	0,3928,4705,6040,6491,7003,11452,12300,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	1543813	1546249	chr7:1543813-1546249	0	-	1543813	1543813	8553170	2	668,1556,	0,880,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	1543829	1545779	chr7:1543829-1545779	0	-	1543829	1543829	8553170	2	228,181,	0,1769,
#Deleted in new
chr7	1546228	1550930	chr7:1546228-1550930	0	-	1546228	1546228	8553170	6	953,198,1427,76,75,114,	0,1513,2290,3894,4076,4588,
#Partially deleted in new
chr7	1548648	1556237	chr7:1548648-1556237	0	-	1548648	1555484	789624	8	40,58,92,76,91,166,219,124,	0,898,1205,1474,1656,2168,6617,7465,
#Partially deleted in new
chr7	1549477	1555472	chr7:1549477-1555472	0	-	1549477	1549477	8553170	5	468,76,91,166,207,	0,645,827,1339,5788,
#Partially deleted in new
chr7	1549897	1560821	chr7:1549897-1560821	0	-	1550371	1555484	789624	6	48,76,75,166,219,160,	0,225,407,919,5368,10764,
#Partially deleted in new
chr7	1550147	1555531	chr7:1550147-1555531	0	-	1550147	1555484	789624	4	51,91,166,266,	0,157,669,5118,
#Partially deleted in new
chr7	1550304	1556120	chr7:1550304-1556120	0	-	1550304	1555484	789624	4	91,166,219,164,	0,512,4961,5652,
#Partially deleted in new
chr7	1550361	1560821	chr7:1550361-1560821	0	-	1550361	1555484	789624	4	34,166,219,160,	0,455,4904,10300,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	1567329	1569993	chr7:1567329-1569993	1	-	1567697	1569339	0	2	521,870,	0,1794,
#Partially deleted in new
chr7	1567350	1570045	chr7:1567350-1570045	1	-	1567697	1569339	0	3	500,237,37,	0,1773,2658,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	1567612	1571005	chr7:1567612-1571005	3	-	1567697	1569339	0	3	238,237,532,	0,1511,2861,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	1570072	1589626	chr7:1570072-1589626	3	+	1570072	1570072	789624	4	207,149,102,5243,	0,4642,5714,14311,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	1570088	1589621	chr7:1570088-1589621	1	+	1570088	1570088	789624	6	445,149,102,108,1234,1801,	0,4626,5698,13073,14295,17732,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	1570134	1586545	chr7:1570134-1586545	0	+	1570134	1570134	789624	5	145,149,102,108,2162,	0,4580,5652,13027,14249,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	1570233	1576062	chr7:1570233-1576062	0	+	1570233	1570233	8553170	3	46,149,276,	0,4481,5553,
#Partially deleted in new
chr7	1614589	1615325	chr7:1614589-1615325	7	+	1614589	1614589	16724991	1	736,	0,
#Deleted in new
chr7	1620653	1621405	chr7:1620653-1621405	3	+	1620653	1620653	8553170	2	103,334,	0,418,
#Deleted in new
chr7	1691905	1692450	chr7:1691905-1692450	3	-	1691905	1691905	8553170	2	299,155,	0,390,
#Deleted in new
chr7	1692809	1694325	chr7:1692809-1694325	3	-	1692809	1692809	8553170	2	1276,147,	0,1369,
#Deleted in new
chr7	1693049	1693972	chr7:1693049-1693972	0	-	1693049	1693049	8553170	1	923,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	1693258	1694357	chr7:1693258-1694357	0	-	1693258	1693258	8553170	2	827,98,	0,1001,
#Partially deleted in new
chr7	1709161	1747954	chr7:1709161-1747954	1	+	1744596	1747083	789624	2	91,3651,	0,35142,
#Partially deleted in new
chr7	1738629	1742272	chr7:1738629-1742272	1	-	1738629	1738629	789624	2	573,64,	0,3579,
#Partially deleted in new
chr7	1738982	1742291	chr7:1738982-1742291	3	-	1738982	1738982	789624	2	553,83,	0,3226,
#Partially deleted in new
chr7	1815792	1872756	chr7:1815792-1872756	0	-	1815792	1815792	8553170	2	436,112,	0,56852,
#Partially deleted in new
chr7	1815793	2230418	chr7:1815793-2230418	1	-	1816069	2230133	0	17	435,191,211,91,89,57,141,145,87,62,115,131,82,125,180,141,435,	0,82406,120893,141835,164659,186271,198708,253400,333358,397418,400091,400363,402168,403538,406781,409616,414190,
#Partially deleted in new
chr7	1815793	2232945	chr7:1815793-2232945	1	-	1816069	2222630	0	17	435,191,211,91,89,57,141,145,87,62,115,131,82,125,139,180,74,	0,82406,120893,141835,164659,186271,198708,253400,333358,397418,400091,400363,402168,403538,405090,406781,417078,
#Deleted in new
chr7	1815794	1817085	chr7:1815794-1817085	0	-	1815794	1815794	8553170	2	434,99,	0,1192,
#Partially deleted in new
chr7	1815794	1829664	chr7:1815794-1829664	0	-	1815794	1815794	8553170	2	434,205,	0,13665,
#Deleted in new
chr7	1815815	1817499	chr7:1815815-1817499	0	-	1815815	1815815	8553170	2	413,41,	0,1643,
#Partially deleted in new
chr7	1816081	1980791	chr7:1816081-1980791	0	-	1816081	1980739	789624	6	147,191,211,91,89,121,	0,82118,120605,141547,164371,164589,
#Partially deleted in new
chr7	1838585	1849931	chr7:1838585-1849931	0	+	1838585	1838585	8553170	2	283,2684,	0,8662,
#Deleted in new
chr7	1844179	1844253	chr7:1844179-1844253	3	-	1844179	1844179	5263520	1	74,	0,
#Deleted in new
chr7	1845299	1849931	chr7:1845299-1849931	3	+	1845299	1845299	8553170	2	1797,2684,	0,1948,
#Partially deleted in new
chr7	1898199	1940549	chr7:1898199-1940549	0	-	1898199	1936861	789624	3	191,211,462,	0,38487,41888,
#Partially deleted in new
chr7	1957628	2080013	chr7:1957628-2080013	0	-	1957628	2079771	789624	6	91,89,57,141,145,316,	0,22824,44436,56873,111565,122069,
#Partially deleted in new
chr7	1980485	2109601	chr7:1980485-2109601	0	-	1980485	2014630	789624	5	56,57,141,145,136,	0,21579,34016,88708,128980,
#Partially deleted in new
chr7	2014505	2107708	chr7:2014505-2107708	0	-	2014505	2014630	789624	3	137,145,282,	0,54688,92921,
#Partially deleted in new
chr7	2069193	2193475	chr7:2069193-2193475	0	-	2069193	2069193	8553170	3	145,87,217,	0,79958,124065,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	2069193	2089251	chr7:2069193-2089251	0	-	2069193	2069193	8553170	2	145,458,	0,19600,
#Partially deleted in new
chr7	2069193	2175385	chr7:2069193-2175385	0	-	2069193	2069193	8553170	3	145,87,262,	0,79958,105930,
#Partially deleted in new
chr7	2148373	2213234	chr7:2148373-2213234	0	-	2148373	2148373	8553170	3	261,87,23,	0,778,64838,
#Partially deleted in new
chr7	2200264	2215927	chr7:2200264-2215927	0	-	2200264	2200264	8553170	4	293,248,62,43,	0,1586,12947,15620,
#Partially deleted in new
chr7	2209947	2218043	chr7:2209947-2218043	0	-	2209947	2209947	8553170	5	87,62,115,131,82,	0,3264,5937,6209,8014,
#Partially deleted in new
chr7	2213211	2223628	chr7:2213211-2223628	0	-	2213211	2222676	789624	7	62,115,131,82,125,180,136,	0,2673,2945,4750,6120,9363,10281,
#Partially deleted in new
chr7	2215956	2225598	chr7:2215956-2225598	0	-	2215956	2225487	789624	6	43,131,82,125,180,189,	0,200,2005,3375,6618,9453,
#Partially deleted in new
chr7	2222574	2232945	chr7:2222574-2232945	0	-	2222574	2230133	789624	4	180,141,160,74,	0,2835,7409,10297,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	2234230	2242169	chr7:2234230-2242169	0	-	2234230	2234230	8553170	3	1334,290,195,	0,5187,7744,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	2234290	2242198	chr7:2234290-2242198	3	-	2235121	2242169	0	3	1274,290,37,	0,5127,7871,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	2234292	2241303	chr7:2234292-2241303	1	-	2235121	2241303	0	3	1272,290,8,	0,5125,7003,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	2234294	2242189	chr7:2234294-2242189	0	-	2238767	2242169	8553170	4	1270,923,290,28,	0,3720,5123,7867,
#Partially deleted in new
chr7	2235046	2239244	chr7:2235046-2239244	1	-	2235121	2239196	789624	2	518,64,	0,4134,
#Partially deleted in new
chr7	2242221	2251145	chr7:2242221-2251145	3	+	2244574	2251001	789624	4	35,164,146,317,	0,2341,7635,8607,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	2242258	2251145	chr7:2242258-2251145	1	+	2244574	2251001	789624	5	34,51,164,146,317,	0,666,2304,7598,8570,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	2242260	2251145	chr7:2242260-2251145	1	+	2242991	2251001	789624	5	32,124,164,146,317,	0,664,2302,7596,8568,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	2242276	2244685	chr7:2242276-2244685	0	+	2244574	2244685	789624	2	699,123,	0,2286,
#Partially deleted in new
chr7	2244475	2251145	chr7:2244475-2251145	1	+	2244574	2251001	789624	3	251,146,317,	0,5381,6353,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	2244608	2248169	chr7:2244608-2248169	0	+	2244608	2244608	8553170	2	118,145,	0,3416,
#Partially deleted in new
chr7	2249284	2251146	chr7:2249284-2251146	0	+	2249284	2249284	8553170	3	408,146,318,	0,572,1544,
#Partially deleted in new
chr7	2251769	2314464	chr7:2251769-2314464	3	-	2255055	2314421	789624	11	3400,150,150,69,133,161,81,122,118,206,137,	0,5104,5595,5965,11460,12528,17789,20080,23342,26330,62558,
#Partially deleted in new
chr7	2255039	2257618	chr7:2255039-2257618	0	-	2255039	2255039	8553170	3	130,150,254,	0,1834,2325,
#Deleted in new
chr7	2257514	2257577	chr7:2257514-2257577	3	-	2257514	2257514	5263520	1	63,	0,
#Partially deleted in new
chr7	2257665	2271896	chr7:2257665-2271896	0	-	2257665	2257665	8553170	5	138,133,161,81,47,	0,5564,6632,11893,14184,
#Partially deleted in new
chr7	2264365	2309946	chr7:2264365-2309946	0	-	2264365	2309856	789624	6	93,81,122,118,206,142,	0,5193,7484,10746,13734,45439,
#Partially deleted in new
chr7	2264392	2299437	chr7:2264392-2299437	0	-	2264392	2278240	789624	6	66,81,122,118,206,93,	0,5166,7457,10719,13707,34952,
#Partially deleted in new
chr7	2264439	2354309	chr7:2264439-2354309	0	-	2264439	2278240	789624	6	19,81,122,118,206,88,	0,5119,7410,10672,13660,89782,
#Partially deleted in new
chr7	2274959	2314441	chr7:2274959-2314441	0	-	2274959	2274959	8553170	3	270,206,114,	0,3140,39368,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	2275115	2354318	chr7:2275115-2354318	0	-	2275115	2278240	789624	4	114,206,166,97,	0,2984,62000,79106,
#Partially deleted in new
chr7	2278113	2307950	chr7:2278113-2307950	0	-	2278113	2278240	789624	2	192,223,	0,29614,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	2287914	2288428	chr7:2287914-2288428	7	+	2287914	2287914	16724991	2	166,58,	0,456,
#Partially deleted in new
chr7	2354085	2366435	chr7:2354085-2366435	0	+	2363073	2366435	789624	8	110,187,193,120,58,129,158,119,	0,1148,6624,8559,8984,9546,10286,12231,
#Partially deleted in new
chr7	2354865	2380743	chr7:2354865-2380743	3	+	2354921	2379497	0	19	555,193,120,58,129,158,132,67,47,211,73,123,79,139,126,78,109,118,540,	0,5844,7779,8204,8766,9506,11451,11659,12133,14606,16911,17807,19662,20523,22084,23823,24268,24528,25338,
#Partially deleted in new
chr7	2354866	2364396	chr7:2354866-2364396	0	+	2354921	2364396	789624	7	250,187,193,120,58,129,25,	0,367,5843,7778,8203,8765,9505,
#Partially deleted in new
chr7	2354881	2380745	chr7:2354881-2380745	1	+	2354921	2379497	0	19	539,193,120,58,129,158,132,67,47,211,73,123,79,139,126,78,109,118,467,	0,5828,7763,8188,8750,9490,11435,11643,12117,14590,16895,17791,19646,20507,22068,23807,24252,24512,25397,
#Partially deleted in new
chr7	2363020	2367024	chr7:2363020-2367024	0	+	2363020	2363020	8553170	5	107,129,158,132,26,	0,611,1351,3296,3978,
#Partially deleted in new
chr7	2364323	2366743	chr7:2364323-2366743	0	+	2364323	2364323	8553170	2	206,427,	0,1993,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	2364323	2367119	chr7:2364323-2367119	0	+	2364323	2364323	8553170	3	206,275,121,	0,1993,2675,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	2366529	2372190	chr7:2366529-2372190	0	+	2366529	2366529	8553170	4	62,47,211,414,	0,469,2942,5247,
#Partially deleted in new
chr7	2373117	2380740	chr7:2373117-2380740	0	+	2373117	2373117	8553170	5	2410,126,554,118,537,	0,3832,5571,6276,7086,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	2375974	2380740	chr7:2375974-2380740	0	+	2375974	2375974	8553170	5	1101,78,109,118,462,	0,2714,3159,3419,4304,
#Deleted in new
chr7	2377823	2380740	chr7:2377823-2380740	0	+	2377823	2377823	8553170	2	1419,1347,	0,1570,
#Deleted in new
chr7	2378686	2379841	chr7:2378686-2379841	0	+	2378686	2378686	8553170	3	80,109,448,	0,447,707,
#Partially deleted in new
chr7	2383697	2388652	chr7:2383697-2388652	7	+	2383697	2383697	16724991	3	85,169,111,	0,806,4844,
#Partially deleted in new
chr7	2384120	2388597	chr7:2384120-2388597	4	+	2384120	2384120	16724991	2	552,56,	0,4421,
#Deleted in new
chr7	2393846	2394131	chr7:2393846-2394131	7	-	2393846	2393846	16724991	1	285,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	2403559	2434579	chr7:2403559-2434579	1	+	2432639	2433884	789624	2	114,2017,	0,29003,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	2403587	2448483	chr7:2403587-2448483	3	+	2432639	2433884	789624	2	58,15921,	0,28975,
#Partially deleted in new
chr7	2404098	2433375	chr7:2404098-2433375	0	+	2432639	2433375	789624	2	108,813,	0,28464,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	2437762	2447850	chr7:2437762-2447850	0	+	2437762	2437762	5263520	2	158,1909,	0,8179,
#Partially deleted in new
chr7	2474843	2476383	chr7:2474843-2476383	3	-	2474869	2476383	789624	5	42,167,160,80,12,	0,297,825,1076,1528,
#Partially deleted in new
chr7	2475429	2476894	chr7:2475429-2476894	0	-	2475429	2475429	8553170	3	399,80,170,	0,490,1295,
#Deleted in new
chr7	2512528	2528427	chr7:2512528-2528427	1	+	2512654	2527212	789624	9	173,172,49,100,154,86,166,86,1282,	0,628,12166,12690,12885,13156,13715,14307,14617,
#Deleted in new
chr7	2517862	2528429	chr7:2517862-2528429	1	+	2518553	2527212	789624	9	82,51,49,100,154,86,166,86,1284,	0,685,6832,7356,7551,7822,8381,8973,9283,
#Deleted in new
chr7	2518553	2528427	chr7:2518553-2528427	1	+	2518553	2527212	789624	8	45,49,100,154,86,166,86,1282,	0,6141,6665,6860,7131,7690,8282,8592,
#Deleted in new
chr7	2519841	2528429	chr7:2519841-2528429	3	+	2519861	2527212	789624	8	452,49,100,154,86,166,86,1284,	0,4853,5377,5572,5843,6402,6994,7304,
#Deleted in new
chr7	2519861	2529177	chr7:2519861-2529177	1	+	2519861	2528886	789624	8	432,49,100,154,86,166,86,304,	0,4833,5357,5552,5823,6382,6974,9012,
#Deleted in new
chr7	2523592	2526871	chr7:2523592-2526871	0	+	2523592	2523592	8553170	6	118,49,349,86,166,36,	0,1102,1626,2092,2651,3243,
#Deleted in new
chr7	2524647	2528427	chr7:2524647-2528427	1	+	2524654	2527212	789624	8	43,52,100,154,86,166,86,1282,	0,44,571,766,1037,1596,2188,2498,
#Deleted in new
chr7	2527073	2527145	chr7:2527073-2527145	3	+	2527073	2527073	5263520	1	72,	0,
#Partially deleted in new
chr7	2537876	2555727	chr7:2537876-2555727	3	-	2538068	2554431	0	14	888,173,99,103,74,187,119,92,120,373,148,155,143,241,	0,1302,1667,1909,3102,3421,3841,4243,5327,5713,7032,9447,16428,17610,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	2537880	2554447	chr7:2537880-2554447	0	-	2537880	2537880	8553170	10	1471,99,1267,187,119,92,759,148,155,143,	0,1663,1905,3417,3837,4239,5323,7028,9443,16424,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	2537880	2555694	chr7:2537880-2555694	0	-	2537880	2537880	8553170	11	884,173,99,1267,187,119,1843,148,155,143,208,	0,1298,1663,1905,3417,3837,4239,7028,9443,16424,17606,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	2537880	2544252	chr7:2537880-2544252	0	-	2537880	2537880	8553170	3	884,1941,2535,	0,1663,3837,
#Partially deleted in new
chr7	2538411	2541024	chr7:2538411-2541024	0	-	2538411	2538411	8553170	5	353,99,103,65,46,	0,1132,1374,2418,2567,
#Partially deleted in new
chr7	2542180	2554448	chr7:2542180-2554448	0	-	2543737	2554431	789624	5	31,120,373,155,144,	0,1023,1409,5143,12124,
#Partially deleted in new
chr7	2558971	2614733	chr7:2558971-2614733	1	+	2571590	2610162	789624	20	246,129,135,71,114,51,71,73,50,164,56,200,105,91,168,24,111,122,104,4690,	0,12554,13220,14446,19270,19504,23608,24665,25264,27236,28850,30935,34050,35914,39493,42469,45909,46904,48152,51072,
#Partially deleted in new
chr7	2558997	2614734	chr7:2558997-2614734	3	+	2559181	2610162	789624	22	220,48,46,129,135,71,114,51,71,73,50,164,56,200,105,91,168,24,111,122,104,4691,	0,8118,9956,12528,13194,14420,19244,19478,23582,24639,25238,27210,28824,30909,34024,35888,39467,42443,45883,46878,48126,51046,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	2559020	2578526	chr7:2559020-2578526	0	+	2559181	2578526	789624	9	197,48,46,129,135,108,71,114,51,	0,8095,9933,12505,13171,13693,14397,19221,19455,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr7	2559047	2601949	chr7:2559047-2601949	0	+	2559047	2559047	8553170	18	170,48,46,129,135,71,114,51,71,73,50,164,56,200,105,91,168,509,	0,8068,9906,12478,13144,14370,19194,19428,23532,24589,25188,27160,28774,30859,33974,35838,39417,42393,
#Partially deleted in new
chr7	2559051	2610162	chr7:2559051-2610162	1	+	2559181	2610162	789624	21	166,46,129,135,71,114,51,71,73,50,164,56,200,105,91,168,24,111,122,104,119,	0,9902,12474,13140,14366,19190,19424,23528,24585,25184,27156,28770,30855,33970,35834,39413,42389,45829,46824,48072,50992,
#Partially deleted in new
chr7	2559056	2610278	chr7:2559056-2610278	0	+	2559181	2571618	789624	20	161,129,135,71,114,51,71,73,50,164,56,200,105,91,168,24,111,122,104,235,	0,12469,13135,14361,19185,19419,23523,24580,25179,27151,28765,30850,33965,35829,39408,42384,45824,46819,48067,50987,
#Partially deleted in new
chr7	2559078	2607555	chr7:2559078-2607555	1	+	2559181	2607367	789624	21	139,48,46,129,135,71,114,51,71,73,50,164,56,200,105,91,168,24,111,122,432,	0,8037,9875,12447,13113,14339,19163,19397,23501,24558,25157,27129,28743,30828,33943,35807,39386,42362,45802,46797,48045,
#Partially deleted in new
chr7	2559137	2610269	chr7:2559137-2610269	1	+	2559181	2610162	789624	21	80,20,50,135,71,114,51,71,73,50,164,56,200,105,91,168,24,111,122,104,226,	0,12388,12467,13054,14280,19104,19338,23442,24499,25098,27070,28684,30769,33884,35748,39327,42303,45743,46738,47986,50906,
#Partially deleted in new
chr7	2559148	2607562	chr7:2559148-2607562	1	+	2559181	2607367	789624	20	69,46,129,135,71,114,51,71,73,50,164,56,200,105,91,168,24,111,122,439,	0,9805,12377,13043,14269,19093,19327,23431,24488,25087,27059,28673,30758,33873,35737,39316,42292,45732,46727,47975,
#Partially deleted in new
chr7	2559423	2610162	chr7:2559423-2610162	1	+	2571590	2610162	789624	20	97,253,135,71,114,51,71,73,50,164,56,200,105,91,168,24,111,122,104,119,	0,11978,12768,13994,18818,19052,23156,24213,24812,26784,28398,30483,33598,35462,39041,42017,45457,46452,47700,50620,
#Partially deleted in new
chr7	2559426	2578355	chr7:2559426-2578355	0	+	2571590	2578355	789624	5	94,129,135,71,114,	0,12099,12765,13991,18815,
#Partially deleted in new
chr7	2580109	2584666	chr7:2580109-2584666	0	+	2580109	2580109	8553170	4	141,71,73,431,	0,2470,3527,4126,
#Partially deleted in new
chr7	2582026	2590021	chr7:2582026-2590021	0	+	2582026	2590021	789624	7	51,71,73,50,164,56,115,	0,553,1610,2209,4181,5795,7880,
#Partially deleted in new
chr7	2589904	2598736	chr7:2589904-2598736	0	+	2589904	2589904	8553170	4	202,105,91,272,	0,3117,4981,8560,
#Partially deleted in new
chr7	2596898	2607325	chr7:2596898-2607325	0	+	2596957	2607325	789624	6	239,168,24,111,122,202,	0,1566,4542,7982,8977,10225,
#Partially deleted in new
chr7	2598125	2607131	chr7:2598125-2607131	0	+	2598125	2598125	8553170	6	259,168,24,111,122,8,	0,339,3315,6755,7750,8998,
#Partially deleted in new
chr7	2631950	2664802	chr7:2631950-2664802	3	+	2632155	2661739	789624	14	328,170,112,221,96,73,76,56,93,93,137,174,76,3135,	0,14902,15191,15467,16008,17616,17962,20236,20967,24141,24447,26335,26989,29717,
#Partially deleted in new
chr7	2632155	2664800	chr7:2632155-2664800	1	+	2632155	2661739	789624	13	123,170,112,221,73,76,56,93,93,137,174,76,3133,	0,14697,14986,15262,17411,17757,20031,20762,23936,24242,26130,26784,29512,
#Partially deleted in new
chr7	2645531	2647176	chr7:2645531-2647176	0	+	2645742	2647176	789624	3	355,170,35,	0,1321,1610,
#Partially deleted in new
chr7	2647702	2664800	chr7:2647702-2664800	1	+	2647845	2661739	789624	10	352,73,76,56,93,93,137,174,76,3133,	0,1864,2210,4484,5215,8389,8695,10583,11237,13965,
#Deleted in new
chr7	2647955	2649987	chr7:2647955-2649987	0	+	2647955	2647955	8553170	3	583,73,75,	0,1611,1957,
#Partially deleted in new
chr7	2652824	2658456	chr7:2652824-2658456	0	+	2652824	2652824	8553170	4	186,93,137,171,	0,3267,3573,5461,
#Partially deleted in new
chr7	2656091	2661842	chr7:2656091-2661842	0	+	2656091	2660020	789624	6	93,137,174,76,101,175,	0,306,2194,2848,3848,5576,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	2679521	2716529	chr7:2679521-2716529	3	+	2700451	2712878	789624	7	150,522,168,129,170,177,4200,	0,20712,23200,29066,29553,30118,32808,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	2688201	2713100	chr7:2688201-2713100	1	+	2700451	2712445	789624	6	95,522,168,129,177,771,	0,12032,14520,20386,21438,24128,
#Partially deleted in new
chr7	2702020	2709189	chr7:2702020-2709189	0	+	2702020	2702020	8553170	4	424,168,129,115,	0,701,6567,7054,
#Partially deleted in new
chr7	2702475	2709114	chr7:2702475-2709114	0	+	2702475	2702475	8553170	3	414,129,40,	0,6112,6599,
#Partially deleted in new
chr7	2702529	2765125	chr7:2702529-2765125	0	+	2702529	2702529	8553170	5	76,168,129,177,414,	0,192,6058,7110,62182,
#Partially deleted in new
chr7	2728111	2844324	chr7:2728111-2844324	3	-	2731180	2844161	789624	4	3639,51,216,472,	0,5339,66816,115741,
#Partially deleted in new
chr7	2728560	2815259	chr7:2728560-2815259	1	-	2731180	2814930	789624	5	3190,51,216,78,383,	0,4890,66367,85751,86316,
#Partially deleted in new
chr7	2728560	2763209	chr7:2728560-2763209	0	-	2728560	2728560	8553170	3	3190,51,134,	0,4890,34515,
#Partially deleted in new
chr7	2728565	2763140	chr7:2728565-2763140	1	-	2731180	2762888	789624	3	3185,51,549,	0,4885,34026,
#Partially deleted in new
chr7	2729823	2763327	chr7:2729823-2763327	0	-	2729823	2729823	8553170	4	1927,51,224,248,	0,3627,32346,33256,
#Partially deleted in new
chr7	2731022	2795145	chr7:2731022-2795145	0	-	2731022	2731022	8553170	3	728,51,426,	0,2428,63697,
#Partially deleted in new
chr7	2731350	2760452	chr7:2731350-2760452	0	-	2731350	2731350	8553170	3	400,51,111,	0,2100,28991,
#Partially deleted in new
chr7	2764607	2775500	chr7:2764607-2775500	0	+	2764607	2764607	8553170	2	332,212,	0,10681,
#Partially deleted in new
chr7	2794966	2815258	chr7:2794966-2815258	0	-	2794966	2814930	789624	2	177,382,	0,19910,
#Deleted in new
chr7	2835620	2836022	chr7:2835620-2836022	7	+	2835620	2835620	16724991	1	402,	0,
#Partially deleted in new
chr7	2906140	3043945	chr7:2906140-3043945	3	-	2906637	2958506	0	25	702,116,125,180,136,96,97,241,127,202,133,53,101,83,52,177,198,126,153,180,326,138,213,132,279,	0,3909,6031,7146,9096,11149,12350,13231,16493,16991,18092,20598,22457,23851,26394,28312,30896,31766,32538,33608,38071,39678,41434,52359,137526,
#Partially deleted in new
chr7	2917289	2923040	chr7:2917289-2923040	0	-	2917289	2917289	8553170	4	96,97,241,407,	0,1201,2082,5344,
#Partially deleted in new
chr7	2919479	2930060	chr7:2919479-2930060	0	-	2919479	2930060	789624	7	133,127,202,133,53,98,69,	0,3154,3652,4753,7259,9118,10512,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	2944034	2947091	chr7:2944034-2947091	3	+	2944034	2944034	8553170	2	474,495,	0,2562,
#Partially deleted in new
chr7	2947575	3043845	chr7:2947575-3043845	0	-	2947575	2958506	789624	4	212,132,61,179,	0,10924,32944,96091,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	2999093	2999394	chr7:2999093-2999394	3	+	2999093	2999093	8553170	1	301,	0,
#Partially deleted in new
chr7	3083251	3086421	chr7:3083251-3086421	3	-	3083251	3083251	8553170	2	367,70,	0,3100,
#Partially deleted in new
chr7	3140233	3158255	chr7:3140233-3158255	0	-	3140233	3140233	8553170	2	63,118,	0,17904,
#Partially deleted in new
chr7	3140919	3158255	chr7:3140919-3158255	0	-	3140919	3140919	8553170	2	281,118,	0,17218,
#Deleted in new
chr7	3196625	3198256	chr7:3196625-3198256	3	-	3196625	3196625	8553170	3	305,51,62,	0,1387,1569,
#Partially deleted in new
chr7	3264031	3302452	chr7:3264031-3302452	3	-	3264031	3264031	8553170	2	758,224,	0,38197,
#Partially deleted in new
chr7	3301447	4269000	chr7:3301447-4269000	3	+	3301586	4265384	789624	45	437,160,107,148,134,112,191,84,195,117,168,103,177,137,148,141,182,116,193,99,192,122,110,151,238,116,190,99,195,202,104,71,136,60,102,116,187,138,162,126,165,138,121,130,3877,	0,317632,337556,340510,520002,649475,650282,657483,661209,665870,667809,670018,672921,685738,709518,710647,715723,747900,750190,766390,775550,778015,809215,811841,812589,825933,828460,830877,844274,847814,857000,860338,872774,874327,877037,904431,906651,908577,918661,919791,931807,936199,940345,944228,963676,
#Partially deleted in new
chr7	3301586	4266408	chr7:3301586-4266408	1	+	3301586	4265384	789624	44	298,160,107,148,134,112,191,84,195,117,168,103,177,137,148,141,182,116,193,99,192,122,110,151,238,116,190,99,195,202,104,71,136,102,116,187,138,162,126,165,138,121,130,1285,	0,317493,337417,340371,519863,649336,650143,657344,661070,665731,667670,669879,672782,685599,709379,710508,715584,747761,750051,766251,775411,777876,809076,811702,812450,825794,828321,830738,844135,847675,856861,860199,872635,876898,904292,906512,908438,918522,919652,931668,936060,940206,944089,963537,
#Partially deleted in new
chr7	3301586	4269000	chr7:3301586-4269000	1	+	3301586	4265384	789624	46	308,7,143,107,148,134,112,191,84,195,117,168,103,177,137,148,141,182,116,193,99,192,122,110,151,238,116,190,99,195,202,104,71,136,60,102,116,187,138,162,126,165,138,121,130,3877,	0,174464,317510,337417,340371,519863,649336,650143,657344,661070,665731,667670,669879,672782,685599,709379,710508,715584,747761,750051,766251,775411,777876,809076,811702,812450,825794,828321,830738,844135,847675,856861,860199,872635,874188,876898,904292,906512,908438,918522,919652,931668,936060,940206,944089,963537,
#Deleted in new
chr7	3337888	3338489	chr7:3337888-3338489	7	+	3337888	3337888	16724991	1	601,	0,
#Deleted in new
chr7	3338125	3338601	chr7:3338125-3338601	5	+	3338125	3338125	16724991	1	476,	0,
#Deleted in new
chr7	3642814	3643784	chr7:3642814-3643784	3	-	3642814	3642814	8553170	2	537,319,	0,651,
#Partially deleted in new
chr7	3950919	3958287	chr7:3950919-3958287	0	+	3950919	3958056	789624	3	115,191,248,	0,810,7120,
#Deleted in new
chr7	3950920	3952109	chr7:3950920-3952109	0	+	3950920	3950920	8553170	2	114,380,	0,809,
#Partially deleted in new
chr7	3971465	3974758	chr7:3971465-3974758	0	+	3971465	3971465	8553170	2	103,390,	0,2903,
#Partially deleted in new
chr7	4129684	4269000	chr7:4129684-4269000	0	+	4129684	4129684	8553170	20	413,99,195,202,104,71,136,60,102,116,187,138,162,126,165,138,121,130,125,323,	0,2640,16037,19577,28763,32101,44537,46090,48800,76194,78414,80340,90424,91554,103570,107962,112108,115991,135439,138993,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	4130180	4134837	chr7:4130180-4134837	3	-	4130180	4130180	8553170	3	309,182,87,	0,2190,4570,
#Partially deleted in new
chr7	4174221	4179258	chr7:4174221-4179258	0	+	4174221	4174221	8553170	4	136,60,102,135,	0,1553,4263,4902,
#Partially deleted in new
chr7	4227154	4266408	chr7:4227154-4266408	0	+	4227154	4227154	8553170	6	269,165,138,121,130,1285,	0,6100,10492,14638,18521,37969,
#Partially deleted in new
chr7	4232886	4237671	chr7:4232886-4237671	0	+	4232886	4232886	8553170	2	533,25,	0,4760,
#Partially deleted in new
chr7	4511958	4512033	chr7:4511958-4512033	7	-	4511958	4511958	16724991	1	75,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	4682308	4771443	chr7:4682308-4771443	3	+	4682308	4762464	789624	9	560,186,157,147,194,167,285,225,9260,	0,58529,72150,72928,74685,76742,77002,78755,79875,
#Partially deleted in new
chr7	4740858	4755051	chr7:4740858-4755051	0	+	4740858	4754621	789624	2	165,593,	0,13600,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	4758008	4760029	chr7:4758008-4760029	0	+	4758008	4758008	8553170	2	1209,719,	0,1302,
#Partially deleted in new
chr7	4775614	4791714	chr7:4775614-4791714	0	+	4775715	4784236	8553170	16	142,138,145,110,169,141,38,163,179,143,141,112,98,133,215,600,	0,5560,7701,8074,8588,9293,9800,9907,10635,12019,12539,13225,14217,14844,15058,15500,
#Partially deleted in new
chr7	4775621	4791756	chr7:4775621-4791756	3	+	4775715	4791385	789624	17	135,138,187,145,110,169,141,38,163,179,143,141,112,98,133,215,642,	0,5553,5946,7694,8067,8581,9286,9793,9900,10628,12012,12532,13218,14210,14837,15051,15493,
#Partially deleted in new
chr7	4775632	4791752	chr7:4775632-4791752	0	+	4775632	4775632	8553170	14	124,145,110,169,141,38,163,179,143,141,112,760,215,638,	0,7683,8056,8570,9275,9782,9889,10617,12001,12521,13207,14199,15040,15482,
#Partially deleted in new
chr7	4775633	4784942	chr7:4775633-4784942	0	+	4775715	4784236	8553170	4	123,138,169,35,	0,5541,8569,9274,
#Partially deleted in new
chr7	4775634	4791752	chr7:4775634-4791752	1	+	4775715	4791385	789624	17	122,138,187,145,110,169,141,38,163,179,143,141,112,98,133,215,638,	0,5540,5933,7681,8054,8568,9273,9780,9887,10615,11999,12519,13205,14197,14824,15038,15480,
#Partially deleted in new
chr7	4775637	4791714	chr7:4775637-4791714	0	+	4775715	4787751	8553170	17	119,138,187,145,110,169,141,38,163,179,181,141,112,98,133,215,600,	0,5537,5930,7678,8051,8565,9270,9777,9884,10612,11958,12516,13202,14194,14821,15035,15477,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr7	4775651	4794395	chr7:4775651-4794395	0	+	4775715	4790250	8553170	17	105,138,187,145,110,169,141,38,163,179,143,141,112,98,378,215,3281,	0,5523,5916,7664,8037,8551,9256,9763,9870,10598,11982,12502,13188,14180,14562,15021,15463,
#Partially deleted in new
chr7	4781612	4791744	chr7:4781612-4791744	0	+	4781612	4781612	8553170	14	339,110,169,141,38,163,179,143,141,112,98,133,215,630,	0,2076,2590,3295,3802,3909,4637,6021,6541,7227,8219,8846,9060,9502,
#Deleted in new
chr7	4783322	4785048	chr7:4783322-4785048	0	+	4783322	4783322	8553170	3	476,169,141,	0,880,1585,
#Partially deleted in new
chr7	4783458	4786653	chr7:4783458-4786653	0	+	4783458	4783458	8553170	7	2,110,169,141,38,163,404,	0,230,744,1449,1956,2063,2791,
#Partially deleted in new
chr7	4784907	4790886	chr7:4784907-4790886	0	+	4784907	4786014	8553170	10	141,38,163,428,181,141,112,98,133,214,	0,507,614,1093,2688,3246,3932,4924,5551,5765,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	4784910	4791518	chr7:4784910-4791518	0	+	4784910	4784910	8553170	9	138,1014,181,141,112,98,133,215,404,	0,504,2685,3243,3929,4921,5548,5762,6204,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	4785794	4787856	chr7:4785794-4787856	0	+	4785794	4785794	8553170	2	634,223,	0,1839,
#Partially deleted in new
chr7	4786315	4791728	chr7:4786315-4791728	0	+	4786315	4791385	8553170	7	113,143,141,112,98,78,614,	0,1318,1838,2524,3516,4494,4799,
#Partially deleted in new
chr7	4786374	4789039	chr7:4786374-4789039	0	+	4786374	4786374	8553170	4	54,181,141,200,	0,1221,1779,2465,
#Deleted in new
chr7	4787712	4791734	chr7:4787712-4791734	0	+	4787712	4790419	8553170	7	64,141,112,98,203,215,620,	0,441,1127,2119,2676,2960,3402,
#Deleted in new
chr7	4787836	4791597	chr7:4787836-4791597	0	+	4787836	4787836	8553170	6	458,112,98,133,215,483,	0,1003,1995,2622,2836,3278,
#Deleted in new
chr7	4788225	4791750	chr7:4788225-4791750	0	+	4788225	4788225	8553170	4	726,760,215,636,	0,1606,2447,2889,
#Deleted in new
chr7	4788564	4788639	chr7:4788564-4788639	3	-	4788564	4788564	5263520	1	75,	0,
#Deleted in new
chr7	4789836	4791727	chr7:4789836-4791727	0	+	4789836	4789836	8553170	4	93,133,78,613,	0,622,973,1278,
#Deleted in new
chr7	4789836	4791727	chr7:4789836-4791727	0	+	4789836	4791246	8553170	4	93,133,78,613,	0,622,973,1278,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	4797054	4883654	chr7:4797054-4883654	0	-	4834793	4878139	789624	15	2429,140,140,343,209,151,173,238,113,161,38,628,248,599,59,	0,2575,3116,4598,6491,8511,18223,19173,20184,25339,35086,37552,39303,80550,86541,
#Partially deleted in new
chr7	4799104	4883719	chr7:4799104-4883719	3	-	4799377	4878139	0	15	379,140,140,343,209,151,173,238,113,161,38,633,248,599,124,	0,525,1066,2548,4441,6461,16173,17123,18134,23289,33036,35502,37253,78500,84491,
#Deleted in new
chr7	4799104	4804068	chr7:4799104-4804068	0	-	4799104	4799104	8553170	5	379,140,140,343,523,	0,525,1066,2548,4441,
#Partially deleted in new
chr7	4799108	4832209	chr7:4799108-4832209	0	-	4799108	4799108	8553170	11	375,140,140,343,209,151,173,238,113,157,69,	0,521,1062,2544,4437,6457,16169,17119,18130,23285,33032,
#Partially deleted in new
chr7	4805244	4815333	chr7:4805244-4815333	0	-	4805244	4805244	8553170	2	472,56,	0,10033,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	4811187	4811289	chr7:4811187-4811289	3	-	4811187	4811187	8553170	1	102,	0,
#Partially deleted in new
chr7	4815277	4832219	chr7:4815277-4832219	0	-	4815277	4815277	8553170	5	173,238,113,161,79,	0,950,1961,7116,16863,
#Deleted in new
chr7	4857732	4861994	chr7:4857732-4861994	3	-	4859896	4861810	789624	1	4262,	0,
#Deleted in new
chr7	4865431	4865804	chr7:4865431-4865804	7	-	4865431	4865431	16724991	1	373,	0,
#Partially deleted in new
chr7	4877737	4882209	chr7:4877737-4882209	0	-	4877737	4878139	789624	2	466,101,	0,4371,
#Partially deleted in new
chr7	4905988	4959212	chr7:4905988-4959212	3	-	4907395	4959017	789624	7	1611,142,102,75,161,82,242,	0,3892,5156,10016,14182,19462,52982,
#Partially deleted in new
chr7	4905988	4959191	chr7:4905988-4959191	1	-	4909733	4959017	789624	8	1611,50,70,102,75,161,82,221,	0,3740,3892,5156,10016,14182,19462,52982,
#Partially deleted in new
chr7	4905997	4959213	chr7:4905997-4959213	1	-	4907395	4959017	789624	7	1602,70,102,75,161,82,243,	0,3883,5147,10007,14173,19453,52973,
#Partially deleted in new
chr7	4909733	4959213	chr7:4909733-4959213	1	-	4909733	4959017	789624	7	45,70,102,75,161,82,243,	0,147,1411,6271,10437,15717,49237,
#Partially deleted in new
chr7	4973987	4998169	chr7:4973987-4998169	5	+	4973987	4973987	16724991	8	174,136,103,166,65,115,108,1560,	0,2313,9683,10922,12579,15075,21487,22622,
#Partially deleted in new
chr7	4973987	4995522	chr7:4973987-4995522	7	+	4973987	4973987	16724991	7	174,136,103,166,65,115,48,	0,2313,9683,10922,12579,15075,21487,
#Partially deleted in new
chr7	4973987	4986591	chr7:4973987-4986591	5	+	4973987	4973987	16724991	5	174,136,103,221,25,	0,2313,9683,10922,12579,
#Partially deleted in new
chr7	4974015	4996893	chr7:4974015-4996893	4	+	4974015	4974015	16724991	3	146,136,284,	0,2285,22594,
#Partially deleted in new
chr7	4974036	4998165	chr7:4974036-4998165	4	+	4974036	4974036	16724991	6	125,136,103,166,115,1556,	0,2264,9634,10873,15026,22573,
#Partially deleted in new
chr7	4974049	4997452	chr7:4974049-4997452	4	+	4974049	4974049	16724991	5	112,136,103,166,843,	0,2251,9621,10860,22560,
#Partially deleted in new
chr7	4974051	5040675	chr7:4974051-5040675	5	+	4974051	4974051	16724991	5	110,136,103,166,431,	0,2249,9619,10858,66193,
#Partially deleted in new
chr7	4974120	4985075	chr7:4974120-4985075	4	+	4974120	4974120	16724991	5	41,136,217,103,166,	0,2180,7520,9550,10789,
#Partially deleted in new
chr7	4976364	4996673	chr7:4976364-4996673	4	+	4976364	4976364	16724991	6	72,103,114,115,108,64,	0,7306,8597,12698,19110,20245,
#Partially deleted in new
chr7	4983694	4997119	chr7:4983694-4997119	4	+	4983694	4983694	16724991	4	79,166,144,510,	0,1215,5339,12915,
#Partially deleted in new
chr7	4983717	5073221	chr7:4983717-5073221	1	+	5048076	5073218	789624	8	56,166,59,127,96,61,136,300,	0,1192,64315,73577,73966,79977,88644,89204,
#Partially deleted in new
chr7	4984715	4996774	chr7:4984715-4996774	4	+	4984715	4984715	16724991	2	360,165,	0,11894,
#Partially deleted in new
chr7	4984907	4989368	chr7:4984907-4989368	4	+	4984907	4984907	16724991	2	168,306,	0,4155,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	4993508	4998167	chr7:4993508-4998167	4	+	4993508	4993508	16724991	2	2074,1558,	0,3101,
#Deleted in new
chr7	5009163	5009328	chr7:5009163-5009328	7	-	5009163	5009163	16724991	1	165,	0,
#Partially deleted in new
chr7	5031607	5037831	chr7:5031607-5037831	7	-	5031607	5031607	16724991	6	60,169,86,59,230,109,	0,182,2358,3668,4876,6115,
#Partially deleted in new
chr7	5045820	5067257	chr7:5045820-5067257	1	+	5048076	5065601	789624	6	138,142,59,127,96,3563,	0,434,2212,11474,11863,17874,
#Partially deleted in new
chr7	5045910	5073221	chr7:5045910-5073221	3	+	5048076	5072465	789624	6	48,59,127,96,136,300,	0,2122,11384,11773,26451,27011,
#Partially deleted in new
chr7	5045921	5069488	chr7:5045921-5069488	3	+	5048076	5065601	789624	5	475,59,127,96,5794,	0,2111,11373,11762,17773,
#Partially deleted in new
chr7	5056986	5063875	chr7:5056986-5063875	0	+	5056986	5056986	8553170	3	435,96,181,	0,697,6708,
#Partially deleted in new
chr7	5072124	5073223	chr7:5072124-5073223	3	+	5072124	5072124	789624	3	76,136,302,	0,237,797,
#Duplicated in new
chr7	5103718	5120245	chr7:5103718-5120245	7	+	5103718	5103718	16724991	4	170,100,143,3127,	0,3965,12911,13400,
#Duplicated in new
chr7	5103722	5120245	chr7:5103722-5120245	5	+	5103722	5103722	16724991	4	166,100,154,3127,	0,3961,12907,13396,
#Partially deleted in new
chr7	5117134	5118087	chr7:5117134-5118087	5	+	5117134	5117134	16724991	1	953,	0,
#Partially deleted in new
chr7	5121238	5127795	chr7:5121238-5127795	5	-	5121238	5121238	16724991	3	881,96,179,	0,5591,6378,
#Partially deleted in new
chr7	5121571	5144546	chr7:5121571-5144546	7	-	5121571	5121571	16724991	6	652,96,127,42,135,300,	0,5258,6045,10876,14983,22675,
#Partially deleted in new
chr7	5190187	5233826	chr7:5190187-5233826	1	+	5190419	5230947	789624	13	306,54,83,170,97,98,93,71,108,165,108,131,2992,	0,2930,9388,24347,26375,26902,27734,32414,35635,36992,37916,39420,40647,
#Partially deleted in new
chr7	5190195	5231524	chr7:5190195-5231524	3	+	5190419	5230947	789624	12	298,83,170,97,98,93,71,108,165,108,131,690,	0,9380,24339,26367,26894,27726,32406,35627,36984,37908,39412,40639,
#Partially deleted in new
chr7	5190245	5231104	chr7:5190245-5231104	1	+	5190419	5230947	789624	13	248,54,83,170,97,98,93,71,108,165,108,98,270,	0,2872,9330,24289,26317,26844,27676,32356,35577,36934,37858,39362,40589,
#Partially deleted in new
chr7	5190258	5230947	chr7:5190258-5230947	0	+	5190258	5190258	8553170	13	235,228,83,170,97,98,93,71,108,165,108,131,113,	0,2859,9317,24276,26304,26831,27663,32343,35564,36921,37845,39349,40576,
#Partially deleted in new
chr7	5190264	5214702	chr7:5190264-5214702	0	+	5190264	5190264	8553170	4	229,83,293,168,	0,9311,22845,24270,
#Partially deleted in new
chr7	5190272	5231470	chr7:5190272-5231470	1	+	5190419	5230947	789624	12	221,83,170,97,98,93,71,108,165,108,98,636,	0,9303,24262,26290,26817,27649,32329,35550,36907,37831,39335,40562,
#Partially deleted in new
chr7	5190692	5218013	chr7:5190692-5218013	0	+	5190692	5190692	8553170	7	151,54,83,170,97,98,92,	0,2425,8883,23842,25870,26397,27229,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	5214185	5219031	chr7:5214185-5219031	0	+	5214185	5214185	8553170	3	519,97,1942,	0,2377,2904,
#Partially deleted in new
chr7	5214268	5231064	chr7:5214268-5231064	1	+	5214500	5230947	789624	10	436,97,98,93,71,108,165,108,98,230,	0,2294,2821,3653,8333,11554,12911,13835,15339,16566,
#Partially deleted in new
chr7	5214560	5222812	chr7:5214560-5222812	0	+	5214560	5214560	8553170	5	144,97,98,93,211,	0,2002,2529,3361,8041,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	5216171	5225854	chr7:5216171-5225854	0	+	5216171	5216171	8553170	6	79,97,98,93,71,32,	0,391,918,1750,6430,9651,
#Partially deleted in new
chr7	5216590	5225978	chr7:5216590-5225978	0	+	5216590	5216590	8553170	6	69,115,98,93,71,156,	0,158,499,1331,6011,9232,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	5225949	5231723	chr7:5225949-5231723	0	+	5225949	5225949	8553170	4	1395,108,131,889,	0,2154,3658,4885,
#Partially deleted in new
chr7	5229407	5231327	chr7:5229407-5231327	0	+	5229407	5229407	8553170	2	331,493,	0,1427,
#Partially deleted in new
chr7	5274368	5291766	chr7:5274368-5291766	0	+	5287816	5291766	789624	5	123,180,132,114,74,	0,13437,16363,16755,17324,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	5282929	5306870	chr7:5282929-5306870	3	+	5287816	5302939	789624	11	153,177,132,114,129,75,263,139,188,241,4074,	0,4879,7802,8194,8763,11930,14006,16058,16310,17492,19867,
#Partially deleted in new
chr7	5282961	5291767	chr7:5282961-5291767	0	+	5287816	5291767	789624	5	121,180,132,114,38,	0,4844,7770,8162,8768,
#Partially deleted in new
chr7	5282968	5304060	chr7:5282968-5304060	1	+	5287816	5302939	789624	11	114,180,132,114,129,75,263,139,188,241,1264,	0,4837,7763,8155,8724,11891,13967,16019,16271,17453,19828,
#Partially deleted in new
chr7	5283028	5304060	chr7:5283028-5304060	1	+	5287816	5302939	789624	11	54,177,132,114,92,70,263,139,188,241,1264,	0,4780,7703,8095,8701,11836,13907,15959,16211,17393,19768,
#Partially deleted in new
chr7	5299328	5303680	chr7:5299328-5303680	0	+	5299328	5299328	8553170	3	99,241,465,	0,1093,3887,
#Partially deleted in new
chr7	5306789	5423546	chr7:5306789-5423546	1	-	5308105	5421246	789624	30	1523,75,237,1357,169,117,109,76,118,142,153,428,249,276,361,172,129,137,176,990,430,191,147,206,103,1665,144,156,430,106,	0,2085,2342,5713,8190,9166,13528,13742,14283,17424,18306,25832,38772,45029,50126,52608,54804,55107,55860,63585,67265,69244,70057,70581,71132,80882,83695,87650,114270,116651,
#Partially deleted in new
chr7	5306799	5423546	chr7:5306799-5423546	3	-	5308105	5421246	789624	30	1513,75,237,1361,165,117,109,76,118,142,153,428,249,276,361,172,129,137,176,990,430,191,147,206,103,1665,144,156,430,106,	0,2075,2332,5703,8184,9156,13518,13732,14273,17414,18296,25822,38762,45019,50116,52598,54794,55097,55850,63575,67255,69234,70047,70571,71122,80872,83685,87640,114260,116641,
#Partially deleted in new
chr7	5313110	5320607	chr7:5313110-5320607	0	-	5313110	5320607	789624	5	753,165,117,109,76,	0,1873,2845,7207,7421,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	5320139	5320662	chr7:5320139-5320662	0	-	5320139	5320139	8553170	2	287,131,	0,392,
#Partially deleted in new
chr7	5324221	5332878	chr7:5324221-5332878	0	-	5324221	5332878	789624	4	134,153,33,257,	0,874,5715,8400,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	5324246	5325574	chr7:5324246-5325574	0	-	5324246	5324246	8553170	2	109,479,	0,849,
#Partially deleted in new
chr7	5352001	5362027	chr7:5352001-5362027	0	-	5352001	5362027	789624	4	93,361,172,131,	0,4914,7396,9895,
#Partially deleted in new
chr7	5376113	5388029	chr7:5376113-5388029	0	-	5376113	5388029	789624	5	111,147,206,103,358,	0,733,1257,1808,11558,
#Partially deleted in new
chr7	5389304	5407394	chr7:5389304-5407394	0	-	5389304	5394560	789624	4	32,144,156,245,	0,1180,5135,17845,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	5389449	5425414	chr7:5389449-5425414	1	-	5390356	5394560	789624	3	1179,156,124,	0,4990,35841,
#Deleted in new
chr7	5419826	5420767	chr7:5419826-5420767	3	+	5419826	5419826	8553170	2	151,432,	0,509,
#Deleted in new
chr7	5419845	5423122	chr7:5419845-5423122	3	+	5419845	5419845	8553170	2	423,330,	0,2947,
#Deleted in new
chr7	5425769	5426401	chr7:5425769-5426401	3	+	5425769	5425769	8553170	1	632,	0,
#Deleted in new
chr7	5426276	5428927	chr7:5426276-5428927	3	-	5426276	5426276	8553170	1	2651,	0,
#Deleted in new
chr7	5428730	5429672	chr7:5428730-5429672	3	+	5428730	5428730	8553170	1	942,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	5431334	5513752	chr7:5431334-5513752	0	-	5447836	5513674	789624	7	168,162,118,219,1544,219,96,	0,7155,16391,59896,69153,74077,82322,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	5475803	5479811	chr7:5475803-5479811	3	+	5475803	5475803	8553170	2	1227,2024,	0,1984,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	5480450	5513768	chr7:5480450-5513768	1	-	5500988	5513674	789624	5	572,180,849,219,112,	0,20370,20732,24961,33206,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	5480557	5513798	chr7:5480557-5513798	3	-	5481774	5513674	789624	5	1374,219,1544,219,142,	0,10673,19930,24854,33099,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	5480581	5500996	chr7:5480581-5500996	1	-	5481829	5500948	789624	4	1350,219,399,108,	0,10649,19906,20307,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	5489177	5501919	chr7:5489177-5501919	0	-	5489806	5501919	789624	3	1035,219,1432,	0,2053,11310,
#Deleted in new
chr7	5495818	5495917	chr7:5495818-5495917	3	-	5495818	5495818	5263520	1	99,	0,
#Deleted in new
chr7	5527146	5530709	chr7:5527146-5530709	3	-	5527747	5529657	0	6	745,182,439,240,129,186,	0,857,1134,2014,2388,3377,
#Deleted in new
chr7	5527147	5530601	chr7:5527147-5530601	1	-	5527747	5529657	0	6	744,182,439,240,129,78,	0,856,1133,2013,2387,3376,
#Deleted in new
chr7	5527150	5528098	chr7:5527150-5528098	0	-	5527747	5528098	789624	3	461,159,95,	0,582,853,
#Deleted in new
chr7	5527155	5530601	chr7:5527155-5530601	0	-	5529044	5529657	789624	7	736,182,439,41,240,129,78,	0,848,1125,1863,2005,2379,3368,
#Deleted in new
chr7	5527155	5530601	chr7:5527155-5530601	0	-	5527155	5527155	8553170	5	736,182,1120,129,78,	0,848,1125,2379,3368,
#Deleted in new
chr7	5527535	5530602	chr7:5527535-5530602	1	-	5527747	5529657	0	6	356,182,439,240,199,79,	0,468,745,1625,1999,2988,
#Deleted in new
chr7	5528003	5530595	chr7:5528003-5530595	0	-	5528003	5528003	8553170	4	182,439,240,72,	0,277,1157,2520,
#Deleted in new
chr7	5528010	5530597	chr7:5528010-5530597	0	-	5528010	5529657	789624	5	175,391,240,129,74,	0,270,1150,1524,2513,
#Deleted in new
chr7	5528149	5530604	chr7:5528149-5530604	0	-	5528149	5528716	789624	3	36,439,81,	0,131,2374,
#Deleted in new
chr7	5528469	5530590	chr7:5528469-5530590	0	-	5528469	5528469	8553170	3	250,503,67,	0,691,2054,
#Deleted in new
chr7	5528585	5529949	chr7:5528585-5529949	0	-	5528585	5529657	789624	3	134,240,415,	0,575,949,
#Partially deleted in new
chr7	5528591	5563784	chr7:5528591-5563784	0	-	5528591	5529657	789624	4	128,240,129,71,	0,569,943,35122,
#Deleted in new
chr7	5528716	5530601	chr7:5528716-5530601	0	-	5528716	5528716	8553170	5	3,41,240,199,78,	0,302,444,818,1807,
#Deleted in new
chr7	5528933	5530600	chr7:5528933-5530600	0	-	5528933	5528933	8553170	4	126,240,129,77,	0,227,601,1590,
#Deleted in new
chr7	5529066	5530583	chr7:5529066-5530583	0	-	5529066	5529066	8553170	2	597,60,	0,1457,
#Partially deleted in new
chr7	5529215	5562828	chr7:5529215-5562828	0	-	5529215	5529657	789624	3	185,129,255,	0,319,33358,
#Deleted in new
chr7	5529234	5529982	chr7:5529234-5529982	0	-	5529234	5529657	789624	3	166,129,177,	0,300,571,
#Deleted in new
chr7	5556730	5557245	chr7:5556730-5557245	3	+	5556730	5556730	8553170	1	515,	0,
#Partially deleted in new
chr7	5560742	5561055	chr7:5560742-5561055	7	+	5560742	5560742	16724991	1	313,	0,
#Partially deleted in new
chr7	5592822	5606655	chr7:5592822-5606655	3	+	5592936	5605474	0	5	946,157,122,168,1384,	0,10434,10673,11040,12449,
#Partially deleted in new
chr7	5593847	5603983	chr7:5593847-5603983	0	+	5603258	5603983	789624	4	180,157,122,121,	0,9409,9648,10015,
#Partially deleted in new
chr7	5594546	5603946	chr7:5594546-5603946	0	+	5603258	5603946	789624	4	350,157,122,84,	0,8710,8949,9316,
#Partially deleted in new
chr7	5594685	5603998	chr7:5594685-5603998	0	+	5603258	5603998	789624	4	135,157,122,136,	0,8571,8810,9177,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	5602871	5606654	chr7:5602871-5606654	0	+	5602871	5602871	8553170	4	542,122,168,1383,	0,624,991,2400,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr7	5620046	5781696	chr7:5620046-5781696	1	-	5622859	5761069	789624	17	3133,70,223,98,79,149,138,51,140,115,165,103,77,672,134,136,156,	0,4009,21107,32366,91714,92668,95006,96669,100986,105277,109385,110668,119229,120926,132799,140956,161494,
#Partially deleted in new
chr7	5622606	5781739	chr7:5622606-5781739	3	-	5622859	5761069	789624	17	573,70,223,98,79,149,138,51,140,115,165,103,77,843,134,136,199,	0,1449,18547,29806,89154,90108,92446,94109,98426,102717,106825,108108,116669,118366,130239,138396,158934,
#Partially deleted in new
chr7	5622694	5761138	chr7:5622694-5761138	0	-	5739513	5761069	789624	16	485,70,223,98,79,149,138,51,140,115,165,103,346,672,134,136,	0,1361,18459,29718,89066,90020,92358,94021,98338,102629,106737,108020,116581,118278,130151,138308,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	5622926	5650015	chr7:5622926-5650015	0	-	5622926	5622926	8553170	4	253,70,223,376,	0,1129,18227,26713,
#Partially deleted in new
chr7	5641347	5713441	chr7:5641347-5713441	0	-	5641347	5641347	8553170	5	29,98,79,149,137,	0,11065,70413,71367,71957,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	5662431	5680461	chr7:5662431-5680461	3	-	5662431	5662431	789624	3	134,95,108,	0,4178,17922,
#Deleted in new
chr7	5711839	5711910	chr7:5711839-5711910	3	-	5711839	5711839	5263520	1	71,	0,
#Partially deleted in new
chr7	5729529	5739492	chr7:5729529-5739492	0	-	5729529	5729529	8553170	4	67,103,193,217,	0,1185,3440,9746,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	5741578	5781646	chr7:5741578-5781646	0	-	5760428	5761069	789624	5	66,134,121,136,106,	0,11267,18812,19424,39962,
#Partially deleted in new
chr7	5761010	5781620	chr7:5761010-5781620	0	-	5761010	5761069	789624	5	128,45,175,142,80,	0,5884,13994,16476,20530,
#Partially deleted in new
chr7	5761087	5780292	chr7:5761087-5780292	0	-	5761087	5761087	8553170	4	51,45,142,308,	0,5807,16399,18897,
#Partially deleted in new
chr7	5823159	5847311	chr7:5823159-5847311	7	+	5823159	5823159	16724991	6	367,103,42,127,167,546,	0,8021,10367,16789,17530,23606,
#Partially deleted in new
chr7	5823188	5839152	chr7:5823188-5839152	4	+	5823188	5823188	16724991	4	338,103,42,83,	0,7992,10338,15881,
#Partially deleted in new
chr7	5823206	5847743	chr7:5823206-5847743	5	+	5823206	5823206	16724991	6	320,103,42,127,167,978,	0,7974,10320,16742,17483,23559,
#Partially deleted in new
chr7	5823215	5840042	chr7:5823215-5840042	4	+	5823215	5823215	16724991	4	311,42,135,94,	0,10311,15854,16733,
#Partially deleted in new
chr7	5847321	5854365	chr7:5847321-5854365	5	+	5847321	5847321	16724991	2	546,259,	0,6785,
#Partially deleted in new
chr7	5879826	5886242	chr7:5879826-5886242	3	+	5880889	5886089	0	5	137,64,133,110,179,	0,1060,2666,4063,6237,
#Partially deleted in new
chr7	5880797	5886362	chr7:5880797-5886362	1	+	5880889	5886089	0	4	153,133,110,299,	0,1695,3092,5266,
#Partially deleted in new
chr7	5898724	5900633	chr7:5898724-5900633	0	+	5898724	5898724	8553170	2	195,350,	0,1559,
#Partially deleted in new
chr7	5898733	5925974	chr7:5898733-5925974	3	+	5898799	5925687	789624	15	186,98,94,78,48,84,176,82,62,112,34,118,159,128,343,	0,1550,1739,2121,2923,3927,6360,11301,13127,14109,20133,21115,24653,25101,26898,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	5898780	5902297	chr7:5898780-5902297	0	+	5898780	5898780	8553170	3	139,98,1825,	0,1503,1692,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	5898799	5926550	chr7:5898799-5926550	1	+	5898799	5900873	789624	14	120,98,78,48,84,176,82,62,112,34,118,159,128,919,	0,1484,2055,2857,3861,6294,11235,13061,14043,20067,21049,24587,25035,26832,
#Partially deleted in new
chr7	5902595	5910236	chr7:5902595-5910236	0	+	5902595	5902595	8553170	3	149,176,202,	0,2498,7439,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	5917725	5925970	chr7:5917725-5925970	0	+	5917725	5917725	8553170	4	2241,159,128,339,	0,5661,6109,7906,
#Partially deleted in new
chr7	5924740	5925940	chr7:5924740-5925940	0	+	5924740	5924740	8553170	2	74,309,	0,891,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	5925549	5959083	chr7:5925549-5959083	1	-	5943456	5957984	8553170	14	999,199,94,129,144,108,247,115,190,122,145,177,121,91,	0,2646,7232,9470,12208,13172,17676,19514,22670,25745,27525,30455,32357,33443,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr7	5926145	5967204	chr7:5926145-5967204	1	-	5926367	5967116	789624	19	403,199,94,129,144,108,149,80,115,190,122,145,177,121,86,174,69,76,342,	0,2050,6636,8874,11612,12576,17178,17765,18918,22074,25149,26929,29859,31761,32847,34545,38356,39491,40717,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr7	5926145	5970683	chr7:5926145-5970683	1	-	5926367	5967116	789624	21	403,199,94,129,144,108,149,80,115,190,122,145,177,121,86,174,69,76,339,120,66,	0,2050,6636,8874,11612,12576,17178,17765,18918,22074,25149,26929,29859,31761,32847,34545,38356,39491,40717,41172,44472,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr7	5926145	5970683	chr7:5926145-5970683	3	-	5926367	5967116	789624	20	403,199,94,129,144,108,149,80,115,190,122,145,177,121,86,174,69,76,575,66,	0,2050,6636,8874,11612,12576,17178,17765,18918,22074,25149,26929,29859,31761,32847,34545,38356,39491,40717,44472,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	5928031	5963482	chr7:5928031-5963482	0	-	5928031	5928031	8553170	11	363,129,108,149,190,122,145,177,121,157,71,	0,6988,10690,15292,20188,23263,25043,27973,29875,32676,35380,
#Partially deleted in new
chr7	5951342	5963501	chr7:5951342-5963501	0	-	5951342	5951342	8553170	6	74,160,50,121,174,90,	0,1732,4789,6564,9348,12069,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	5951351	5953583	chr7:5951351-5953583	0	-	5951351	5951351	8553170	2	65,509,	0,1723,
#Partially deleted in new
chr7	5956103	5963359	chr7:5956103-5963359	0	-	5956103	5956103	8553170	4	78,121,174,119,	0,1803,4587,7137,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	5967076	5970683	chr7:5967076-5970683	0	-	5967076	5967116	789624	3	125,120,401,	0,241,3206,
#Partially deleted in new
chr7	5967103	5970632	chr7:5967103-5970632	0	-	5967103	5967116	8553170	2	98,350,	0,3179,
#Partially deleted in new
chr7	5973238	6009125	chr7:5973238-6009125	3	-	5973398	6009019	0	15	304,170,101,168,862,156,85,100,98,168,184,103,87,140,129,	0,4349,5357,9585,13520,16561,18734,22295,24087,25869,29214,30451,30733,32653,35758,
#Partially deleted in new
chr7	5973241	6009106	chr7:5973241-6009106	1	-	5973398	6004006	789624	14	301,170,101,168,862,156,85,100,98,168,184,87,140,110,	0,4346,5354,9582,13517,16558,18731,22292,24084,25866,29211,30730,32650,35755,
#Partially deleted in new
chr7	5973246	6009097	chr7:5973246-6009097	1	-	5973398	6002584	789624	14	296,170,101,168,862,156,85,100,98,168,184,103,87,101,	0,4341,5349,9577,13512,16553,18726,22287,24079,25861,29206,30443,30725,35750,
#Partially deleted in new
chr7	5973273	6009075	chr7:5973273-6009075	1	-	5973398	6002584	789624	15	269,170,101,168,862,156,85,100,98,168,184,103,87,135,79,	0,4314,5322,9550,13485,16526,18699,22260,24052,25834,29179,30416,30698,32618,35723,
#Partially deleted in new
chr7	5973360	6009041	chr7:5973360-6009041	0	-	5999211	6009019	0	15	182,170,101,168,862,156,85,100,98,119,184,103,87,140,45,	0,4227,5235,9463,13398,16439,18612,22173,23965,25747,29092,30329,30611,32531,35636,
#Partially deleted in new
chr7	5973398	6009019	chr7:5973398-6009019	1	-	5973398	6009019	0	11	144,170,101,168,98,168,184,103,87,140,23,	0,4189,5197,9425,23927,25709,29054,30291,30573,32493,35598,
#Partially deleted in new
chr7	5973398	6004006	chr7:5973398-6004006	1	-	5973398	6004006	789624	12	144,170,101,168,862,156,85,100,98,168,184,35,	0,4189,5197,9425,13360,16401,18574,22135,23927,25709,29054,30573,
#Partially deleted in new
chr7	5977673	6009019	chr7:5977673-6009019	0	-	5977673	5977673	8553170	12	41,534,156,85,100,98,168,184,103,87,140,23,	0,9413,12126,14299,17860,19652,21434,24779,26016,26298,28218,31323,
#Partially deleted in new
chr7	5982874	6009019	chr7:5982874-6009019	0	-	5982874	5982874	8553170	3	31,39,23,	0,23118,26122,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	6001965	6009098	chr7:6001965-6009098	0	-	6001965	6001965	8553170	5	671,103,87,140,102,	0,1724,2006,3926,7031,
#Partially deleted in new
chr7	6003309	6006066	chr7:6003309-6006066	0	-	6003309	6003309	8553170	2	749,175,	0,2582,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	6004282	6004385	chr7:6004282-6004385	3	-	6004282	6004282	8553170	1	103,	0,
#Partially deleted in new
chr7	6009244	6023834	chr7:6009244-6023834	3	+	6009363	6023691	0	4	254,207,232,532,	0,5901,8569,14058,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	6009254	6023695	chr7:6009254-6023695	1	+	6015244	6023691	789624	5	124,151,207,232,393,	0,5647,5891,8559,14048,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	6009289	6015251	chr7:6009289-6015251	0	+	6009363	6012690	789624	3	209,462,106,	0,3389,5856,
#Partially deleted in new
chr7	6009315	6023747	chr7:6009315-6023747	1	+	6009363	6023691	789624	3	183,232,445,	0,8498,13987,
#Deleted in new
chr7	6016876	6017011	chr7:6016876-6017011	3	+	6016876	6016876	5263520	1	135,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	6022243	6059230	chr7:6022243-6059230	3	-	6024672	6059083	789624	15	2558,234,83,115,101,112,328,61,100,81,100,38,134,159,265,	0,4484,6371,6674,15180,16316,18648,20689,22318,23827,24748,26563,27668,32302,36722,
#Partially deleted in new
chr7	6023175	6026552	chr7:6023175-6026552	0	-	6023740	6026552	789624	3	571,93,118,	0,1533,3259,
#Partially deleted in new
chr7	6024355	6028839	chr7:6024355-6028839	0	-	6024355	6024355	8553170	3	446,234,225,	0,2372,4259,
#Partially deleted in new
chr7	6031375	6036386	chr7:6031375-6036386	3	+	6031375	6036386	789624	3	216,98,943,	0,1463,4068,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	6040975	6046980	chr7:6040975-6046980	0	-	6040975	6040975	8553170	4	244,61,100,204,	0,1957,3586,5801,
#Partially deleted in new
chr7	6041152	6046437	chr7:6041152-6046437	0	-	6041152	6041152	8553170	4	67,61,100,367,	0,1780,3409,4918,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	6046070	6059164	chr7:6046070-6059164	0	-	6054671	6059083	789624	7	81,100,38,134,159,95,199,	0,921,2736,3841,8475,12077,12895,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	6046722	6059056	chr7:6046722-6059056	0	-	6046722	6046722	8553170	5	369,38,134,159,91,	0,2084,3189,7823,12243,
#Partially deleted in new
chr7	6047203	6059164	chr7:6047203-6059164	0	-	6047203	6059083	789624	5	43,38,134,159,199,	0,1603,2708,7342,11762,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	6047720	6048023	chr7:6047720-6048023	3	-	6047720	6047720	8553170	1	303,	0,
#Partially deleted in new
chr7	6049783	6059175	chr7:6049783-6059175	0	-	6049783	6049783	8553170	3	262,159,210,	0,4762,9182,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	6057499	6057604	chr7:6057499-6057604	3	+	6057499	6057499	8553170	1	105,	0,
#Partially deleted in new
chr7	6081102	6093052	chr7:6081102-6093052	3	+	6081102	6081102	8553170	4	168,244,111,24,	0,3326,7687,11926,
#Partially deleted in new
chr7	6081670	6093085	chr7:6081670-6093085	1	+	6081670	6081670	8553170	4	128,244,111,57,	0,2758,7119,11358,
#Partially deleted in new
chr7	6104883	6161564	chr7:6104883-6161564	3	+	6111133	6159457	789624	18	149,250,201,111,103,68,71,83,112,141,101,154,720,95,1440,302,44,1010,	0,6241,10439,30957,34208,35244,36030,38048,39201,40632,41264,42855,44699,45528,48872,51870,54566,55671,
#Partially deleted in new
chr7	6104974	6157331	chr7:6104974-6157331	0	+	6104974	6104974	8553170	16	58,250,201,111,103,68,71,83,112,141,101,154,720,95,1440,578,	0,6150,10348,30866,34117,35153,35939,37957,39110,40541,41173,42764,44608,45437,48781,51779,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	6104976	6115381	chr7:6104976-6115381	0	+	6111133	6111852	789624	4	56,250,155,59,	0,6148,6820,10346,
#Partially deleted in new
chr7	6104976	6149822	chr7:6104976-6149822	0	+	6111133	6149822	789624	12	56,250,111,103,68,71,83,112,141,101,154,240,	0,6148,30864,34115,35151,35937,37955,39108,40539,41171,42762,44606,
#Partially deleted in new
chr7	6105021	6160631	chr7:6105021-6160631	0	+	6111133	6139198	789624	17	11,250,201,111,1104,71,83,112,141,101,154,720,95,1440,302,44,77,	0,6103,10301,30819,34070,35892,37910,39063,40494,41126,42717,44561,45390,48734,51732,54428,55533,
#Partially deleted in new
chr7	6116479	6155147	chr7:6116479-6155147	0	+	6135860	6155147	789624	13	460,111,103,68,71,83,112,141,101,154,720,95,1392,	0,19361,22612,23648,24434,26452,27605,29036,29668,31259,33103,33932,37276,
#Partially deleted in new
chr7	6161775	6272644	chr7:6161775-6272644	3	-	6164943	6272507	0	13	3241,155,72,77,112,149,113,81,119,67,65,83,171,	0,3497,3769,3958,8759,9054,9426,11877,16047,25274,25881,28673,110698,
#Partially deleted in new
chr7	6161775	6272644	chr7:6161775-6272644	1	-	6164943	6272507	0	13	3241,155,72,77,115,149,113,81,119,67,65,83,171,	0,3497,3769,3958,8756,9054,9426,11877,16047,25274,25881,28673,110698,
#Partially deleted in new
chr7	6164739	6170221	chr7:6164739-6170221	0	-	6164739	6164739	8553170	3	277,155,144,	0,533,5338,
#Partially deleted in new
chr7	6165544	6170959	chr7:6165544-6170959	0	-	6165544	6165544	8553170	3	72,77,425,	0,189,4990,
#Partially deleted in new
chr7	6165566	6171816	chr7:6165566-6171816	0	-	6165566	6165566	8553170	6	50,77,112,149,113,65,	0,167,4968,5263,5635,6185,
#Partially deleted in new
chr7	6165733	6172137	chr7:6165733-6172137	0	-	6165733	6165733	8553170	5	77,112,149,113,155,	0,4801,5096,5468,6249,
#Deleted in new
chr7	6170848	6172110	chr7:6170848-6172110	0	-	6170848	6170848	8553170	2	466,128,	0,1134,
#Deleted in new
chr7	6170851	6173075	chr7:6170851-6173075	0	-	6170851	6170851	8553170	3	127,113,345,	0,350,1879,
#Partially deleted in new
chr7	6171009	6177941	chr7:6171009-6177941	0	-	6171009	6171009	8553170	3	305,81,119,	0,2643,6813,
#Deleted in new
chr7	6171125	6173075	chr7:6171125-6173075	0	-	6171125	6171125	8553170	2	189,345,	0,1605,
#Partially deleted in new
chr7	6187063	6272644	chr7:6187063-6272644	0	-	6187063	6187063	8553170	5	53,65,185,83,171,	0,593,1641,3385,85410,
#Partially deleted in new
chr7	6329408	6348959	chr7:6329408-6348959	3	-	6330374	6331154	789624	2	1827,387,	0,19164,
#Partially deleted in new
chr7	6329411	6348959	chr7:6329411-6348959	1	-	6330374	6331154	789624	2	1824,387,	0,19161,
#Partially deleted in new
chr7	6330794	6338693	chr7:6330794-6338693	0	-	6330794	6331154	789624	2	441,61,	0,7838,
#Partially deleted in new
chr7	6330827	6348975	chr7:6330827-6348975	0	-	6330827	6331154	789624	2	408,150,	0,17998,
#Partially deleted in new
chr7	6331214	6348758	chr7:6331214-6348758	1	-	6331214	6348758	789624	2	21,186,	0,17358,
#Partially deleted in new
chr7	6365440	6365770	chr7:6365440-6365770	7	+	6365440	6365440	16724991	1	330,	0,
#Partially deleted in new
chr7	6374522	6403977	chr7:6374522-6403977	1	+	6374735	6402446	0	6	248,72,118,63,160,1662,	0,12689,17401,25603,27345,27793,
#Partially deleted in new
chr7	6374538	6402520	chr7:6374538-6402520	3	+	6374735	6402446	0	7	232,72,118,57,63,160,205,	0,12673,17385,24123,25587,27329,27777,
#Partially deleted in new
chr7	6374562	6402481	chr7:6374562-6402481	0	+	6374562	6374562	8553170	7	208,58,72,118,63,160,166,	0,1296,12649,17361,25563,27305,27753,
#Partially deleted in new
chr7	6391457	6402502	chr7:6391457-6402502	0	+	6391457	6391457	8553170	5	123,118,63,160,187,	0,466,8668,10410,10858,
#Partially deleted in new
chr7	6399822	6402365	chr7:6399822-6402365	0	+	6399822	6399822	8553170	3	366,160,50,	0,2045,2493,
#Deleted in new
chr7	6401617	6402520	chr7:6401617-6402520	0	+	6401617	6401617	8553170	2	410,205,	0,698,
#Partially deleted in new
chr7	6409125	6422803	chr7:6409125-6422803	0	-	6409125	6409125	8553170	7	910,251,73,69,128,81,1077,	0,1004,3685,3840,7501,7715,12601,
#Partially deleted in new
chr7	6409128	6448012	chr7:6409128-6448012	3	-	6409836	6447842	789624	15	907,251,73,69,128,81,78,84,127,128,123,259,172,152,265,	0,1001,3682,3837,7498,7712,12598,15623,16859,21351,23708,25633,27233,36824,38619,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	6409129	6417791	chr7:6409129-6417791	0	-	6409129	6409129	8553170	6	906,251,73,69,128,951,	0,1000,3681,3836,7497,7711,
#Partially deleted in new
chr7	6409516	6447934	chr7:6409516-6447934	1	-	6409836	6447842	789624	13	519,251,73,69,128,81,78,84,127,123,172,152,187,	0,613,3294,3449,7110,7324,12210,15235,16471,23320,26845,36436,38231,
#Partially deleted in new
chr7	6409599	6484190	chr7:6409599-6484190	1	-	6409836	6446076	789624	15	436,251,73,69,128,81,78,84,127,128,123,259,172,152,224,	0,530,3211,3366,7027,7241,12127,15152,16388,20880,23237,25162,26762,36353,74367,
#Partially deleted in new
chr7	6412609	6416711	chr7:6412609-6416711	0	-	6412609	6412609	8553170	3	274,69,85,	0,356,4017,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	6412986	6447932	chr7:6412986-6447932	0	-	6424813	6447842	789624	9	48,496,81,78,84,127,123,152,185,	0,3272,3854,8740,11765,13001,19850,32966,34761,
#Partially deleted in new
chr7	6426085	6447952	chr7:6426085-6447952	0	-	6426085	6447842	789624	4	29,172,152,205,	0,10276,19867,21662,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	6445700	6447971	chr7:6445700-6447971	0	-	6445700	6445700	8553170	3	148,152,224,	0,252,2047,
#Partially deleted in new
chr7	6445952	6484190	chr7:6445952-6484190	0	-	6445952	6445952	8553170	2	152,224,	0,38014,
#Partially deleted in new
chr7	6461080	6484242	chr7:6461080-6484242	3	-	6463140	6484057	789624	5	2095,253,159,101,276,	0,4990,8515,13103,22886,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	6461761	6470406	chr7:6461761-6470406	0	-	6461761	6461761	8553170	3	1414,253,811,	0,4309,7834,
#Partially deleted in new
chr7	6462871	6484057	chr7:6462871-6484057	1	-	6462965	6484057	789624	4	304,159,101,91,	0,6724,11312,21095,
#Partially deleted in new
chr7	6469653	6484149	chr7:6469653-6484149	0	-	6482563	6484057	789624	4	101,101,198,183,	0,4530,12738,14313,
#Partially deleted in new
chr7	6474079	6484143	chr7:6474079-6484143	0	-	6474079	6474079	8553170	2	205,177,	0,9887,
#Partially deleted in new
chr7	6490792	6491098	chr7:6490792-6491098	7	-	6490792	6490792	16724991	1	306,	0,
#Partially deleted in new
chr7	6497461	6536897	chr7:6497461-6536897	1	-	6497773	6536844	789624	21	384,165,119,130,87,156,197,78,88,417,356,118,98,129,155,184,95,70,86,249,67,	0,602,4319,4527,5324,5546,6029,7331,8358,10523,11496,12821,13147,13446,16913,23116,23967,24426,28762,29059,39369,
#Partially deleted in new
chr7	6497726	6531186	chr7:6497726-6531186	1	-	6497773	6531102	789624	21	119,165,119,130,87,156,197,78,88,417,356,118,98,129,155,184,95,70,86,249,119,	0,337,4054,4262,5059,5281,5764,7066,8093,10258,11231,12556,12882,13181,16648,22851,23702,24161,28497,28794,33341,
#Partially deleted in new
chr7	6497773	6551436	chr7:6497773-6551436	3	-	6497773	6551436	789624	22	72,165,119,130,87,156,197,78,88,417,356,118,98,132,155,184,95,70,86,249,155,429,	0,290,4007,4215,5012,5234,5717,7019,8046,10211,11184,12509,12835,13134,16601,22804,23655,24114,28450,28747,41944,53234,
#Partially deleted in new
chr7	6577433	6588978	chr7:6577433-6588978	1	+	6580561	6588910	789624	9	65,131,155,124,74,179,126,245,362,	0,156,1132,3121,4173,4639,5872,7582,11183,
#Partially deleted in new
chr7	6577433	6588978	chr7:6577433-6588978	1	+	6580561	6588910	789624	8	287,155,124,74,179,126,245,362,	0,1132,3121,4173,4639,5872,7582,11183,
#Partially deleted in new
chr7	6577433	6588931	chr7:6577433-6588931	1	+	6580561	6588910	789624	8	65,220,124,74,179,126,245,315,	0,1067,3121,4173,4639,5872,7582,11183,
#Partially deleted in new
chr7	6577452	6588926	chr7:6577452-6588926	1	+	6580561	6588910	789624	8	46,155,124,74,179,126,245,310,	0,1113,3102,4154,4620,5853,7563,11164,
#Partially deleted in new
chr7	6577459	6582321	chr7:6577459-6582321	0	+	6577459	6577459	8553170	5	39,155,124,74,249,	0,1106,3095,4147,4613,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	6577461	6580910	chr7:6577461-6580910	0	+	6577461	6577461	8553170	3	37,155,356,	0,1104,3093,
#Partially deleted in new
chr7	6577467	6588919	chr7:6577467-6588919	1	+	6580561	6588910	789624	8	253,181,124,74,179,126,245,303,	0,1098,3087,4139,4605,5838,7548,11149,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	6577467	6584320	chr7:6577467-6584320	0	+	6577467	6577467	8553170	6	31,181,124,74,179,1015,	0,1098,3087,4139,4605,5838,
#Partially deleted in new
chr7	6577480	6583431	chr7:6577480-6583431	0	+	6580561	6583431	789624	7	18,131,155,124,74,179,126,	0,109,1085,3074,4126,4592,5825,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	6577496	6581124	chr7:6577496-6581124	0	+	6577496	6577496	8553170	4	224,155,124,313,	0,1069,3058,3315,
#Partially deleted in new
chr7	6577504	6589374	chr7:6577504-6589374	3	+	6580561	6588910	789624	8	216,220,124,74,179,126,245,758,	0,996,3050,4102,4568,5801,7511,11112,
#Partially deleted in new
chr7	6578564	6588974	chr7:6578564-6588974	3	-	6578564	6578564	8553170	2	77,280,	0,10130,
#Partially deleted in new
chr7	6584902	6588976	chr7:6584902-6588976	0	+	6584902	6584902	8553170	2	358,360,	0,3714,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	6590016	6608726	chr7:6590016-6608726	3	+	6590283	6608161	789624	6	459,222,166,528,40,767,	0,1629,4418,9812,12084,17943,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	6590143	6608724	chr7:6590143-6608724	1	+	6590283	6608161	789624	7	332,165,166,64,230,40,765,	0,1559,4291,9685,9983,11957,17816,
#Partially deleted in new
chr7	6591756	6608097	chr7:6591756-6608097	0	+	6591756	6591756	8553170	5	111,189,528,40,138,	0,2655,8072,10344,16203,
#Partially deleted in new
chr7	6599973	6602259	chr7:6599973-6602259	0	+	6599973	6599973	8553170	2	383,159,	0,2127,
#Partially deleted in new
chr7	6600036	6607851	chr7:6600036-6607851	0	+	6600036	6607624	789624	3	320,40,315,	0,2064,7500,
#Partially deleted in new
chr7	6600199	6608070	chr7:6600199-6608070	0	+	6600199	6607544	789624	5	157,40,89,61,111,	0,1901,2464,7337,7760,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	6615616	6624290	chr7:6615616-6624290	3	+	6616174	6622971	789624	3	570,118,3169,	0,1573,5505,
#Partially deleted in new
chr7	6637321	6656432	chr7:6637321-6656432	3	+	6642409	6654611	789624	9	126,164,100,138,383,110,127,114,4130,	0,524,1720,4503,5060,5642,6500,7158,14981,
#Partially deleted in new
chr7	6637349	6642401	chr7:6637349-6642401	0	+	6637349	6637349	8553170	4	98,164,100,577,	0,496,1692,4475,
#Deleted in new
chr7	6641884	6644565	chr7:6641884-6644565	0	+	6643914	6644565	789624	5	106,91,110,127,86,	0,789,1079,1937,2595,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	6663973	6708901	chr7:6663973-6708901	3	+	6663973	6663973	8553170	4	70,65,95,334,	0,1070,44327,44594,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	6663973	6665521	chr7:6663973-6665521	1	+	6663973	6663973	8553170	2	70,478,	0,1070,
#Partially deleted in new
chr7	6663973	6673601	chr7:6663973-6673601	1	+	6663973	6663973	8553170	3	70,65,397,	0,1070,9231,
#Partially deleted in new
chr7	6673493	6676366	chr7:6673493-6676366	7	+	6673493	6673493	16724991	5	60,162,87,81,261,	0,745,1462,2329,2612,
#Partially deleted in new
chr7	6688432	6700914	chr7:6688432-6700914	1	-	6690847	6697718	789624	5	4055,102,96,127,94,	0,4169,8906,9252,12388,
#Partially deleted in new
chr7	6688432	6706923	chr7:6688432-6706923	3	-	6690847	6705173	789624	5	4271,96,127,65,492,	0,8906,9252,16726,17999,
#Partially deleted in new
chr7	6690448	6706923	chr7:6690448-6706923	1	-	6690847	6705173	789624	6	2039,102,96,127,65,492,	0,2153,6890,7236,14710,15983,
#Partially deleted in new
chr7	6697372	6706843	chr7:6697372-6706843	0	-	6697372	6705173	789624	4	62,123,65,412,	0,316,7786,9059,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	6704159	6706536	chr7:6704159-6706536	0	-	6704159	6704159	8553170	3	152,65,105,	0,999,2272,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	6710127	6753862	chr7:6710127-6753862	7	+	6710127	6710127	16724991	14	111,59,176,120,94,59,129,85,861,168,101,170,353,841,	0,622,1166,20054,20506,21769,23271,25177,26948,31557,35960,36908,41121,42894,
#Partially deleted in new
chr7	6715629	6720982	chr7:6715629-6720982	7	-	6715629	6715629	16724991	5	60,169,84,59,260,	0,182,2715,4019,5093,
#Partially deleted in new
chr7	6729780	6731944	chr7:6729780-6731944	4	+	6729780	6729780	16724991	2	521,48,	0,2116,
#Partially deleted in new
chr7	6735304	6751392	chr7:6735304-6751392	5	+	6735304	6735304	16724991	6	85,861,168,101,170,144,	0,1771,6380,10783,11731,15944,
#Partially deleted in new
chr7	6737634	6747105	chr7:6737634-6747105	4	+	6737634	6737634	16724991	5	302,151,168,101,70,	0,2539,4050,8453,9401,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr7	6754108	6798763	chr7:6754108-6798763	1	+	6757677	6798543	789624	20	66,575,76,69,174,86,121,177,145,122,190,115,80,149,108,144,129,94,199,401,	0,3248,4975,6117,9819,11597,12648,14481,17438,19241,22248,25501,26700,27219,31840,32769,35522,37795,42459,44254,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr7	6754108	6798765	chr7:6754108-6798765	3	+	6757677	6798543	789624	21	66,120,339,76,69,174,86,121,177,145,122,190,115,80,149,108,144,129,94,199,403,	0,3248,3484,4975,6117,9819,11597,12648,14481,17438,19241,22248,25501,26700,27219,31840,32769,35522,37795,42459,44254,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	6754116	6757854	chr7:6754116-6757854	0	+	6757677	6757854	789624	4	161,53,120,262,	0,340,3240,3476,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	6754116	6757706	chr7:6754116-6757706	0	+	6757677	6757706	789624	3	393,120,114,	0,3240,3476,
#Partially deleted in new
chr7	6754123	6776462	chr7:6754123-6776462	0	+	6754123	6754123	8553170	7	51,174,121,50,160,122,106,	0,9804,12633,14466,17408,19226,22233,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr7	6757589	6798765	chr7:6757589-6798765	1	+	6757677	6798543	789624	19	342,76,69,174,86,121,177,145,122,190,115,80,149,108,144,129,94,199,403,	0,1494,2636,6338,8116,9167,11000,13957,15760,18767,22020,23219,23738,28359,29288,32041,34314,38978,40773,
#Partially deleted in new
chr7	6761294	6773423	chr7:6761294-6773423	0	+	6761294	6761294	8553170	6	90,174,121,50,160,74,	0,2633,5462,7295,10237,12055,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	6761313	6796930	chr7:6761313-6796930	0	+	6761313	6761313	8553170	11	71,157,121,177,145,122,190,149,108,129,363,	0,2614,5443,7276,10233,12036,15043,20014,24635,28317,35254,
#Partially deleted in new
chr7	6761436	6768667	chr7:6761436-6768667	0	+	6761436	6761436	8553170	4	119,174,121,78,	0,2491,5320,7153,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	6765705	6799365	chr7:6765705-6799365	0	+	6765705	6781343	789624	14	86,121,177,145,122,190,115,247,108,144,129,94,199,1003,	0,1051,2884,5841,7644,10651,13904,15622,20243,21172,23925,26198,30862,32657,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	6771182	6773414	chr7:6771182-6773414	0	+	6771182	6771182	8553170	2	509,65,	0,2167,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	6794133	6796942	chr7:6794133-6796942	0	-	6794133	6794133	8553170	2	402,167,	0,2642,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	6794140	6796936	chr7:6794140-6796936	0	-	6794140	6794140	8553170	3	395,46,161,	0,2492,2635,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	6796808	6801001	chr7:6796808-6801001	0	-	6796808	6796808	8553170	4	68,132,155,54,	0,1953,2316,4139,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	6796835	6801503	chr7:6796835-6801503	0	-	6796835	6796835	8553170	6	41,61,30,155,128,139,	0,1811,2028,2289,4112,4529,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	6798360	6826770	chr7:6798360-6826770	3	-	6799223	6826197	789624	15	919,128,159,118,34,112,62,82,176,84,48,78,94,98,693,	0,2587,3004,6577,7643,13591,14615,16403,21405,23920,24952,25728,26094,26279,27717,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	6798940	6807178	chr7:6798940-6807178	0	-	6798940	6798940	8553170	4	339,128,159,2241,	0,2007,2424,5997,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	6798940	6826770	chr7:6798940-6826770	1	-	6824147	6826197	789624	14	339,128,159,118,34,112,62,82,176,84,48,78,98,693,	0,2007,2424,5997,7063,13011,14035,15823,20825,23340,24372,25148,25699,27137,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	6799194	6801595	chr7:6799194-6801595	0	-	6799194	6799194	8553170	3	85,128,231,	0,1753,2170,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	6806003	6812510	chr7:6806003-6812510	0	-	6806003	6806003	8553170	2	34,559,	0,5948,
#Partially deleted in new
chr7	6811540	6814828	chr7:6811540-6814828	0	-	6811540	6811540	8553170	2	523,65,	0,3223,
#Partially deleted in new
chr7	6813022	6826243	chr7:6813022-6826243	0	-	6824147	6826197	789624	7	15,82,84,48,78,98,166,	0,1741,9258,10290,11066,11617,13055,
#Partially deleted in new
chr7	6814643	6822429	chr7:6814643-6822429	0	-	6814643	6814643	8553170	3	202,176,149,	0,5122,7637,
#Partially deleted in new
chr7	6823855	6826205	chr7:6823855-6826205	0	-	6823855	6823855	8553170	4	311,94,98,128,	0,599,784,2222,
#Partially deleted in new
chr7	6824037	6826216	chr7:6824037-6826216	0	-	6824037	6824037	8553170	3	511,98,139,	0,602,2040,
#Partially deleted in new
chr7	6824387	6826272	chr7:6824387-6826272	0	-	6824387	6824387	8553170	2	350,195,	0,1690,
#Deleted in new
chr7	6835419	6835794	chr7:6835419-6835794	7	-	6835419	6835419	16724991	1	375,	0,
#Partially deleted in new
chr7	6855484	6859830	chr7:6855484-6859830	7	-	6855484	6855484	16724991	3	316,137,277,	0,2129,4069,
#Deleted in new
chr7	6866657	6867672	chr7:6866657-6867672	7	-	6866657	6866657	16724991	1	1015,	0,
#Deleted in new
chr7	6879626	6880626	chr7:6879626-6880626	7	-	6879626	6879626	16724991	1	1000,	0,
#Deleted in new
chr7	6900423	6900623	chr7:6900423-6900623	7	-	6900423	6900423	16724991	1	200,	0,
#Partially deleted in new
chr7	6923803	6930835	chr7:6923803-6930835	7	+	6923803	6923803	16724991	8	122,122,39,57,111,115,76,129,	0,860,1167,1850,3065,4716,5841,6903,
#Partially deleted in new
chr7	6924077	6924513	chr7:6924077-6924513	7	-	6924077	6924077	16724991	1	436,	0,
#Partially deleted in new
chr7	6931683	6939603	chr7:6931683-6939603	7	-	6931683	6931683	16724991	6	89,181,266,134,102,81,	0,3463,4469,4817,6179,7839,
#Deleted in new
chr7	7066963	7067045	chr7:7066963-7067045	3	-	7066963	7066963	5263520	1	82,	0,
#Deleted in new
chr7	7078301	7079742	chr7:7078301-7079742	7	-	7078301	7078301	16724991	1	1441,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	7102572	7102681	chr7:7102572-7102681	3	-	7102572	7102572	8553170	1	109,	0,
#Partially deleted in new
chr7	7156933	7238428	chr7:7156933-7238428	0	+	7234319	7238428	789624	4	266,125,237,174,	0,368,77369,81321,
#Deleted in new
chr7	7177951	7178324	chr7:7177951-7178324	7	+	7177951	7177951	16724991	1	373,	0,
#Partially deleted in new
chr7	7182546	7238334	chr7:7182546-7238334	0	+	7234319	7238334	789624	3	274,237,80,	0,51756,55708,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	7182614	7248647	chr7:7182614-7248647	3	+	7234319	7243727	789624	4	206,237,668,5124,	0,51688,55640,60909,
#Partially deleted in new
chr7	7182629	7235297	chr7:7182629-7235297	0	+	7182629	7182629	8553170	2	191,995,	0,51673,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	7234257	7248651	chr7:7234257-7248651	1	+	7234319	7243727	789624	3	282,668,5128,	0,3997,9266,
#Partially deleted in new
chr7	7234319	7238964	chr7:7234319-7238964	1	+	7234319	7238964	789624	2	220,710,	0,3935,
#Partially deleted in new
chr7	7255153	7277779	chr7:7255153-7277779	3	+	7255153	7255153	789624	4	25,45,206,195,	0,4398,12083,22431,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	7266907	7277724	chr7:7266907-7277724	0	+	7266907	7266907	8553170	2	535,140,	0,10677,
#Partially deleted in new
chr7	7271407	7277773	chr7:7271407-7277773	1	+	7271407	7271407	8553170	2	437,189,	0,6177,
#Deleted in new
chr7	7293507	7293880	chr7:7293507-7293880	7	+	7293507	7293507	16724991	1	373,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	7356202	7370841	chr7:7356202-7370841	0	-	7358632	7370841	789624	4	893,1174,139,117,	0,1429,4187,14522,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	7356567	7360459	chr7:7356567-7360459	0	-	7358632	7360459	789624	3	453,177,70,	0,2061,3822,
#Partially deleted in new
chr7	7357874	7535853	chr7:7357874-7535853	3	-	7358632	7532875	789624	35	931,139,158,549,37,36,81,69,69,69,69,69,69,69,72,69,72,69,69,69,69,69,69,69,54,45,45,27,42,54,57,21,557,161,104,	0,2515,12850,15123,17586,22785,22907,23669,59984,62010,74598,74757,78520,79519,82915,85710,86543,94444,95565,98169,116726,119237,131514,132703,148139,149242,153216,157939,159921,162187,164030,166354,173473,174877,177875,
#Partially deleted in new
chr7	7417631	7520073	chr7:7417631-7520073	0	-	7511721	7520073	789624	23	296,69,69,69,69,69,72,69,72,69,69,69,69,69,69,69,54,45,45,193,27,42,12,	0,2253,14841,15000,18763,19762,23158,25953,26786,34687,35808,38412,56969,59480,71757,72946,88382,89485,93459,94020,98182,100164,102430,
#Partially deleted in new
chr7	7417631	7420310	chr7:7417631-7420310	0	-	7417631	7417631	8553170	2	296,426,	0,2253,
#Partially deleted in new
chr7	7431217	7437435	chr7:7431217-7437435	0	-	7431502	7437435	789624	5	429,69,69,69,42,	0,1255,1414,5177,6176,
#Deleted in new
chr7	7550103	7552440	chr7:7550103-7552440	3	-	7550103	7550103	8553170	2	1373,282,	0,2055,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	7552461	7566996	chr7:7552461-7566996	3	-	7552461	7552461	8553170	3	461,34,1083,	0,2694,13452,
#Deleted in new
chr7	7552736	7554749	chr7:7552736-7554749	0	-	7552736	7552736	8553170	2	186,62,	0,1951,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	7552852	7564326	chr7:7552852-7564326	0	-	7552852	7552852	8553170	3	70,34,90,	0,2303,11384,
#Partially deleted in new
chr7	7566871	7607496	chr7:7566871-7607496	3	+	7572475	7607092	789624	13	201,82,98,1334,99,255,170,66,159,153,205,130,501,	0,735,1154,5564,7226,16246,18764,21626,22533,28108,29385,39070,40124,
#Partially deleted in new
chr7	7566874	7607223	chr7:7566874-7607223	1	+	7572475	7607092	789624	12	198,98,1334,99,255,170,66,159,153,205,130,228,	0,1151,5561,7223,16243,18761,21623,22530,28105,29382,39067,40121,
#Partially deleted in new
chr7	7566960	7572925	chr7:7566960-7572925	0	+	7572475	7572925	789624	2	112,490,	0,5475,
#Partially deleted in new
chr7	7566987	7573013	chr7:7566987-7573013	0	+	7572475	7573013	789624	2	497,578,	0,5448,
#Partially deleted in new
chr7	7567052	7572667	chr7:7567052-7572667	0	+	7572475	7572667	789624	4	432,82,98,232,	0,554,973,5383,
#Partially deleted in new
chr7	7567482	7572667	chr7:7567482-7572667	0	+	7572475	7572667	789624	3	206,98,232,	0,543,4953,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	7581728	7583372	chr7:7581728-7583372	0	+	7581728	7581728	8553170	3	116,190,255,	0,901,1389,
#Partially deleted in new
chr7	7582953	7608925	chr7:7582953-7608925	0	+	7582953	7582953	8553170	8	419,170,66,159,153,205,130,1930,	0,2682,5544,6451,12026,13303,22988,24042,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	7605117	7608929	chr7:7605117-7608929	0	+	7605117	7605117	8553170	2	954,1934,	0,1878,
#Deleted in new
chr7	7619871	7620543	chr7:7619871-7620543	3	+	7619871	7619871	8553170	1	672,	0,
#Partially deleted in new
chr7	7636517	7718607	chr7:7636517-7718607	3	-	7636999	7640418	0	8	565,109,75,856,169,101,52,93,	0,1346,2552,3802,49312,50710,78657,81997,
#Partially deleted in new
chr7	7636926	7640816	chr7:7636926-7640816	1	-	7636999	7639126	789624	4	156,109,75,94,	0,937,2143,3796,
#Partially deleted in new
chr7	7636931	7640972	chr7:7636931-7640972	1	-	7636999	7640418	0	5	151,109,75,262,250,	0,932,2138,3388,3791,
#Partially deleted in new
chr7	7636974	7640026	chr7:7636974-7640026	1	-	7636999	7639126	789624	4	108,109,75,122,	0,889,2095,2930,
#Deleted in new
chr7	7636984	7638406	chr7:7636984-7638406	0	-	7636984	7636984	8553170	2	98,543,	0,879,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	7638413	7640577	chr7:7638413-7640577	0	-	7638413	7638413	8553170	2	731,258,	0,1906,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	7638578	7640949	chr7:7638578-7640949	0	-	7638578	7638578	8553170	2	566,227,	0,2144,
#Partially deleted in new
chr7	7640710	7738822	chr7:7640710-7738822	0	+	7640710	7640710	8553170	4	111,202,145,112,	0,793,32598,98000,
#Partially deleted in new
chr7	7640751	7877443	chr7:7640751-7877443	1	+	7673371	7801696	789624	5	70,145,107,74,163,	0,32557,35350,160918,236529,
#Partially deleted in new
chr7	7640751	8004053	chr7:7640751-8004053	3	+	7640751	7640751	8553170	5	70,202,145,74,146,	0,752,32557,160918,363156,
#Partially deleted in new
chr7	7640756	7877661	chr7:7640756-7877661	0	+	7673371	7868410	789624	5	72,135,74,279,381,	0,32562,160913,227573,236524,
#Partially deleted in new
chr7	7640775	7879185	chr7:7640775-7879185	3	+	7673371	7877538	789624	4	46,132,74,1905,	0,32546,160894,236505,
#Partially deleted in new
chr7	7640783	7692508	chr7:7640783-7692508	0	+	7640783	7640783	8553170	4	38,145,126,161,	0,32525,48551,51564,
#Partially deleted in new
chr7	7640783	7879205	chr7:7640783-7879205	0	+	7673371	7868410	789624	5	38,145,74,204,1925,	0,32525,160886,227546,236497,
#Partially deleted in new
chr7	7640783	7879210	chr7:7640783-7879210	0	+	7673371	7801685	789624	5	38,145,181,74,1930,	0,32525,97927,160886,236497,
#Partially deleted in new
chr7	7640793	7968020	chr7:7640793-7968020	1	+	7673371	7967773	789624	4	28,145,74,322,	0,32515,160876,326905,
#Deleted in new
chr7	7735742	7736851	chr7:7735742-7736851	7	-	7735742	7735742	16724991	1	1109,	0,
#Partially deleted in new
chr7	7738523	7742574	chr7:7738523-7742574	7	-	7738523	7738523	16724991	2	461,600,	0,3451,
#Partially deleted in new
chr7	7738592	7742055	chr7:7738592-7742055	4	-	7738592	7738592	16724991	3	392,157,81,	0,2093,3382,
#Deleted in new
chr7	7738638	7741120	chr7:7738638-7741120	4	-	7738638	7738638	16724991	2	346,435,	0,2047,
#Deleted in new
chr7	7742103	7742563	chr7:7742103-7742563	5	-	7742103	7742103	16724991	1	460,	0,
#Partially deleted in new
chr7	7772360	7879223	chr7:7772360-7879223	0	+	7772360	7772360	8553170	3	94,74,1943,	0,29309,104920,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	7906518	7906624	chr7:7906518-7906624	3	+	7906518	7906518	8553170	1	106,	0,
#Deleted in new
chr7	7909299	7910449	chr7:7909299-7910449	7	-	7909299	7909299	16724991	1	1150,	0,
#Deleted in new
chr7	7949852	7950709	chr7:7949852-7950709	3	-	7949852	7949852	8553170	2	654,38,	0,819,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	7958182	7969903	chr7:7958182-7969903	3	-	7958182	7958182	8553170	2	436,132,	0,11589,
#Partially deleted in new
chr7	7968793	8089080	chr7:7968793-8089080	3	+	7969350	8086538	789624	8	1014,152,87,117,153,211,121,2888,	0,35114,53689,86639,91302,102127,116103,117399,
#Partially deleted in new
chr7	7969686	8070955	chr7:7969686-8070955	0	+	7969686	8070955	789624	5	121,152,114,153,35,	0,34221,85749,90409,101234,
#Partially deleted in new
chr7	7969686	8071010	chr7:7969686-8071010	0	+	7969686	8071010	789624	6	121,152,87,117,14,90,	0,34221,52796,85746,90409,101234,
#Partially deleted in new
chr7	7969706	8022724	chr7:7969706-8022724	0	+	7969706	7969706	8553170	3	101,152,242,	0,34201,52776,
#Partially deleted in new
chr7	7969735	8004247	chr7:7969735-8004247	0	+	7969735	7969735	8553170	2	72,340,	0,34172,
#Partially deleted in new
chr7	7970440	8060232	chr7:7970440-8060232	0	+	7970440	7970440	8553170	5	65,152,87,114,137,	0,33467,52042,84995,89655,
#Partially deleted in new
chr7	7970451	8070948	chr7:7970451-8070948	0	+	7970451	7970451	8553170	7	54,152,87,100,117,153,28,	0,33456,52031,54263,84981,89644,100469,
#Partially deleted in new
chr7	7980311	7982228	chr7:7980311-7982228	7	+	7980311	7980311	16724991	3	66,775,628,	0,147,1289,
#Partially deleted in new
chr7	8003896	8086939	chr7:8003896-8086939	0	+	8003896	8003896	8553170	6	163,87,114,153,211,747,	0,18586,51539,56199,67024,82296,
#Partially deleted in new
chr7	8055506	8094272	chr7:8055506-8094272	0	+	8055506	8092694	789624	6	43,153,211,121,220,125,	0,4589,15414,29390,37142,38641,
#Partially deleted in new
chr7	8070074	8089077	chr7:8070074-8089077	0	+	8070074	8070074	8553170	2	1057,2885,	0,16118,
#Deleted in new
chr7	8084638	8086240	chr7:8084638-8086240	0	+	8084638	8084638	8553170	2	379,48,	0,1554,
#Partially deleted in new
chr7	8113183	8262281	chr7:8113183-8262281	1	-	8113922	8235926	789624	14	861,270,42,63,53,98,99,126,199,124,73,166,96,188,	0,14689,25656,25801,28581,30691,43932,45343,105121,108091,115417,119406,122726,148910,
#Partially deleted in new
chr7	8113186	8262612	chr7:8113186-8262612	3	-	8113922	8235926	789624	14	858,270,42,63,53,98,99,126,199,124,73,166,96,173,	0,14686,25653,25798,28578,30688,43929,45340,105118,108088,115414,119403,122723,149253,
#Partially deleted in new
chr7	8113245	8262273	chr7:8113245-8262273	0	-	8113922	8235926	8553170	15	266,452,270,39,63,53,98,99,126,199,124,73,166,96,180,	0,347,14627,25597,25739,28519,30629,43870,45281,105059,108029,115355,119344,122664,148848,
#Partially deleted in new
chr7	8113254	8262206	chr7:8113254-8262206	1	-	8113922	8235926	789624	14	790,270,42,63,53,98,99,126,199,124,73,163,96,113,	0,14618,25585,25730,28510,30620,43861,45272,105050,108020,115346,119335,122655,148839,
#Partially deleted in new
chr7	8113308	8262052	chr7:8113308-8262052	1	-	8113922	8235926	789624	14	736,270,42,63,53,98,99,126,199,124,73,166,31,53,	0,14564,25531,25676,28456,30566,43807,45218,104996,107966,115292,119281,122601,148691,
#Partially deleted in new
chr7	8113771	8262527	chr7:8113771-8262527	0	-	8128073	8235926	789624	9	273,270,126,199,124,73,166,96,88,	0,14101,44755,104533,107503,114829,118818,122138,148668,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	8113771	8262153	chr7:8113771-8262153	0	-	8227843	8235926	789624	15	273,270,42,63,53,98,99,126,199,124,214,73,166,96,60,	0,14101,25068,25213,27993,30103,43344,44755,104533,107503,113866,114829,118818,122138,148322,
#Partially deleted in new
chr7	8113778	8236894	chr7:8113778-8236894	1	-	8113922	8235912	789624	14	266,270,42,63,53,98,99,126,199,124,73,144,96,89,	0,14094,25061,25206,27986,30096,43337,44748,104526,107496,114822,118811,122131,123027,
#Partially deleted in new
chr7	8113922	8235926	chr7:8113922-8235926	1	-	8113922	8235926	789624	14	122,270,42,63,53,87,98,99,126,199,124,73,166,17,	0,13950,24917,25062,27842,28046,29952,43193,44604,104382,107352,114678,118667,121987,
#Deleted in new
chr7	8114024	8116561	chr7:8114024-8116561	3	+	8114024	8114024	8553170	3	99,110,315,	0,853,2222,
#Partially deleted in new
chr7	8127872	8262145	chr7:8127872-8262145	0	-	8127872	8127872	8553170	2	270,52,	0,134221,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	8141764	8157764	chr7:8141764-8157764	0	-	8141764	8141764	8553170	3	53,98,649,	0,2110,15351,
#Partially deleted in new
chr7	8156556	8262612	chr7:8156556-8262612	1	-	8156866	8235926	789624	8	658,126,199,124,73,166,96,173,	0,1970,61748,64718,72044,76033,79353,105883,
#Partially deleted in new
chr7	8157115	8236894	chr7:8157115-8236894	0	-	8157115	8235912	789624	8	99,126,199,124,73,144,96,85,	0,1411,61189,64159,71485,75474,78794,79694,
#Partially deleted in new
chr7	8158330	8218459	chr7:8158330-8218459	0	-	8158330	8158330	8553170	2	322,155,	0,59974,
#Partially deleted in new
chr7	8218397	8262543	chr7:8218397-8262543	0	-	8218397	8235926	789624	6	106,124,73,166,31,104,	0,2877,10203,14192,17512,44042,
#Deleted in new
chr7	8218440	8218951	chr7:8218440-8218951	0	-	8218440	8218440	8553170	2	63,348,	0,163,
#Partially deleted in new
chr7	8218478	8262069	chr7:8218478-8262069	0	-	8218478	8235926	789624	6	25,124,73,163,96,70,	0,2796,10122,14111,17431,43521,
#Partially deleted in new
chr7	8221352	8262170	chr7:8221352-8262170	0	-	8223557	8235926	789624	6	46,72,73,166,96,77,	0,2135,7248,11237,14557,40741,
#Partially deleted in new
chr7	8228641	8262687	chr7:8228641-8262687	0	-	8228641	8235926	789624	4	32,163,96,248,	0,3948,7268,33798,
#Deleted in new
chr7	8262232	8262821	chr7:8262232-8262821	3	+	8262232	8262232	8553170	2	187,242,	0,347,
#Partially deleted in new
chr7	8262263	8344516	chr7:8262263-8344516	3	+	8262263	8262263	789624	7	156,247,90,174,210,166,810,	0,316,2327,78119,78753,80861,81443,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	8303753	8340523	chr7:8303753-8340523	1	+	8303753	8303753	8553170	2	402,141,	0,36629,
#Partially deleted in new
chr7	8433954	8752963	chr7:8433954-8752963	3	+	8435713	8751769	789624	3	801,164,1956,	0,1649,317053,
#Partially deleted in new
chr7	8435062	8751371	chr7:8435062-8751371	0	+	8435713	8751371	789624	3	40,164,364,	0,541,315945,
#Partially deleted in new
chr7	8435194	8751383	chr7:8435194-8751383	0	+	8435713	8751383	789624	2	573,376,	0,315813,
#Partially deleted in new
chr7	8690286	8751987	chr7:8690286-8751987	0	+	8690286	8690286	8553170	2	59,980,	0,60721,
#Deleted in new
chr7	8751006	8752959	chr7:8751006-8752959	1	+	8751007	8751769	789624	1	1953,	0,
#Partially deleted in new
chr7	8938786	8939369	chr7:8938786-8939369	7	+	8938786	8938786	16724991	1	583,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	9082556	9189785	chr7:9082556-9189785	3	-	9082556	9082556	8553170	2	1992,226,	0,107003,
#Partially deleted in new
chr7	9084021	9084175	chr7:9084021-9084175	7	+	9084021	9084021	16724991	1	154,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	9097270	9189785	chr7:9097270-9189785	0	-	9097270	9097270	8553170	2	669,209,	0,92306,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	9097270	9189765	chr7:9097270-9189765	0	-	9097270	9097270	8553170	2	669,206,	0,92289,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	9097270	9189857	chr7:9097270-9189857	1	-	9097270	9097270	8553170	4	669,95,308,298,	0,27128,45345,92289,
#Partially deleted in new
chr7	9170947	9171273	chr7:9170947-9171273	7	-	9170947	9170947	16724991	1	326,	0,
#Deleted in new
chr7	9614977	9615985	chr7:9614977-9615985	7	+	9614977	9614977	16724991	1	1008,	0,
#Partially deleted in new
chr7	9634269	9635703	chr7:9634269-9635703	7	+	9634269	9634269	16724991	2	516,313,	0,1121,
#Partially deleted in new
chr7	9726240	9728272	chr7:9726240-9728272	7	+	9726240	9726240	16724991	1	2032,	0,
#Partially deleted in new
chr7	9737321	9769513	chr7:9737321-9769513	3	+	9737321	9737321	8553170	5	162,65,56,54,281,	0,3632,5925,23234,31911,
#Deleted in new
chr7	9850923	9851386	chr7:9850923-9851386	7	+	9850923	9850923	16724991	1	463,	0,
#Partially deleted in new
chr7	9961023	9981817	chr7:9961023-9981817	3	+	9961023	9961023	8553170	3	142,139,80,	0,261,20714,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	10222796	10223011	chr7:10222796-10223011	3	+	10222796	10222796	8553170	1	215,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	10449819	10779944	chr7:10449819-10779944	3	-	10449819	10449819	789624	3	2959,96,63,	0,111662,330062,
#Deleted in new
chr7	10451310	10453252	chr7:10451310-10453252	7	+	10451310	10451310	16724991	1	1942,	0,
#Deleted in new
chr7	10476580	10476878	chr7:10476580-10476878	7	+	10476580	10476580	16724991	1	298,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	10901977	10902074	chr7:10901977-10902074	3	+	10901977	10901977	8553170	1	97,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	10931950	10940256	chr7:10931950-10940256	3	-	10933635	10940057	789624	4	1742,58,89,241,	0,6139,6857,8065,
#Partially deleted in new
chr7	10933514	10938517	chr7:10933514-10938517	0	-	10933514	10933514	8553170	2	178,428,	0,4575,
#Partially deleted in new
chr7	10933664	10939834	chr7:10933664-10939834	0	-	10933664	10933664	8553170	4	28,58,89,327,	0,4425,5143,5843,
#Deleted in new
chr7	10937866	10940079	chr7:10937866-10940079	0	-	10937866	10937866	8553170	3	281,89,64,	0,941,2149,
#Deleted in new
chr7	10938103	10939051	chr7:10938103-10939051	0	-	10938103	10938103	8553170	2	44,244,	0,704,
#Deleted in new
chr7	10939212	10940135	chr7:10939212-10940135	0	-	10939212	10939212	8553170	2	390,176,	0,747,
#Deleted in new
chr7	10940422	10940735	chr7:10940422-10940735	3	+	10940422	10940422	8553170	1	313,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	10973335	11110321	chr7:10973335-11110321	1	+	10974900	11102498	789624	16	168,111,145,160,112,138,147,271,107,96,104,132,169,51,122,7836,	0,1499,17367,40411,49532,55345,62304,63082,63649,65424,67336,69347,78276,88455,88628,129150,
#Partially deleted in new
chr7	10973871	11103655	chr7:10973871-11103655	1	+	10974323	11102498	789624	17	453,111,788,145,160,112,138,147,271,107,96,104,132,169,51,122,1170,	0,963,8500,16831,39875,48996,54809,61768,62546,63113,64888,66800,68811,77740,87919,88092,128614,
#Partially deleted in new
chr7	10973871	11102646	chr7:10973871-11102646	0	+	10974323	10990719	789624	16	453,111,145,160,112,138,147,271,107,96,104,132,169,51,122,161,	0,963,16831,39875,48996,54809,61768,62546,63113,64888,66800,68811,77740,87919,88092,128614,
#Partially deleted in new
chr7	10973888	11169623	chr7:10973888-11169623	0	+	10974323	10990719	789624	17	436,111,145,160,112,138,147,271,107,96,104,132,169,51,122,118,208,	0,946,16814,39858,48979,54792,61751,62529,63096,64871,66783,68794,77723,87902,88075,137461,195527,
#Partially deleted in new
chr7	10973888	11028760	chr7:10973888-11028760	0	+	10973888	10973888	8553170	6	436,111,145,160,112,80,	0,946,16814,39858,48979,54792,
#Partially deleted in new
chr7	10973903	11169630	chr7:10973903-11169630	3	+	10974323	11169490	789624	18	421,111,788,145,160,112,138,147,271,107,96,104,132,169,51,122,118,215,	0,931,8468,16799,39843,48964,54777,61736,62514,63081,64856,66768,68779,77708,87887,88060,137446,195512,
#Partially deleted in new
chr7	10973906	11063072	chr7:10973906-11063072	0	+	10973906	10973906	8553170	16	418,111,788,145,160,112,138,147,271,107,96,104,132,169,51,1109,	0,928,8465,16796,39840,48961,54774,61733,62511,63078,64853,66765,68776,77705,87884,88057,
#Deleted in new
chr7	11006398	11006876	chr7:11006398-11006876	7	-	11006398	11006398	16724991	1	478,	0,
#Partially deleted in new
chr7	11013820	11015219	chr7:11013820-11015219	0	+	11013820	11013820	8553170	2	86,313,	0,1086,
#Deleted in new
chr7	11035584	11036833	chr7:11035584-11036833	0	+	11035584	11035584	8553170	2	202,416,	0,833,
#Partially deleted in new
chr7	11042679	11103682	chr7:11042679-11103682	0	+	11042679	11042679	8553170	5	135,169,51,122,315,	0,8932,19111,19284,60688,
#Partially deleted in new
chr7	11061284	11169623	chr7:11061284-11169623	0	+	11061284	11061284	8553170	4	557,122,118,208,	0,679,50065,108131,
#Deleted in new
chr7	11061749	11062589	chr7:11061749-11062589	0	+	11061749	11061749	8553170	2	92,626,	0,214,
#Deleted in new
chr7	11061815	11062993	chr7:11061815-11062993	0	+	11061815	11061815	8553170	3	26,122,323,	0,148,855,
#Partially deleted in new
chr7	11108560	11169623	chr7:11108560-11169623	0	+	11108560	11108560	8553170	4	55,27,118,208,	0,1964,2789,60855,
#Partially deleted in new
chr7	11108886	11169623	chr7:11108886-11169623	0	+	11108886	11108886	8553170	3	1665,118,208,	0,2463,60529,
#Partially deleted in new
chr7	11110980	11169623	chr7:11110980-11169623	0	+	11110980	11110980	8553170	2	487,208,	0,58435,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	11180901	11248376	chr7:11180901-11248376	1	+	11180901	11180901	8553170	5	348,179,96,222,84,	0,5719,7637,63356,67391,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	11181731	11227655	chr7:11181731-11227655	1	+	11181731	11181731	8553170	6	105,96,56,135,47,139,	0,6807,11263,15578,45286,45785,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	11193365	11379366	chr7:11193365-11379366	1	+	11193365	11193365	8553170	5	57,135,222,83,80,	0,3944,50892,54927,185921,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	11193365	11227829	chr7:11193365-11227829	0	+	11193365	11193365	8553170	4	57,135,47,313,	0,3944,33652,34151,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	11197306	11384418	chr7:11197306-11384418	0	+	11197306	11197306	8553170	3	138,83,622,	0,181980,186490,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	11197306	11322324	chr7:11197306-11322324	0	+	11197306	11197306	8553170	5	138,47,139,222,76,	0,29711,30210,46951,124942,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	11227017	11378177	chr7:11227017-11378177	1	+	11227017	11227017	8553170	5	47,139,119,84,300,	0,499,110675,149980,150860,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	11252979	11520175	chr7:11252979-11520175	1	+	11252979	11252979	8553170	4	246,83,112,124,	0,126307,130817,267072,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	11253112	11385678	chr7:11253112-11385678	1	+	11253112	11253112	8553170	3	113,83,1882,	0,126174,130684,
#Deleted in new
chr7	11257680	11258535	chr7:11257680-11258535	7	-	11257680	11257680	16724991	1	855,	0,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr7	11370356	11832198	chr7:11370356-11832198	3	-	11375793	11831946	789624	28	5522,88,211,83,96,174,175,146,118,116,145,154,134,6,179,264,195,104,133,116,235,195,213,156,182,249,832,442,	0,6213,8713,9273,12164,31438,35943,36553,36949,40850,42299,47093,54339,56309,58590,75704,76873,90305,91654,99522,103977,111431,171062,172605,220103,222897,265773,461400,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr7	11370436	11832198	chr7:11370436-11832198	1	-	11375793	11831946	789624	27	5442,88,211,83,96,174,175,146,118,116,145,154,140,179,264,195,104,133,116,235,195,213,156,182,249,832,442,	0,6133,8633,9193,12084,31358,35863,36473,36869,40770,42219,47013,54259,58510,75624,76793,90225,91574,99442,103897,111351,170982,172525,220023,222817,265693,461320,
#Partially deleted in new
chr7	11374619	11379755	chr7:11374619-11379755	0	-	11374619	11374619	8553170	4	1259,88,211,126,	0,1950,4450,5010,
#Partially deleted in new
chr7	11376995	11383869	chr7:11376995-11383869	2	+	11376995	11376995	8553170	3	86,83,73,	0,2291,6801,
#Partially deleted in new
chr7	11378696	11383869	chr7:11378696-11383869	0	+	11378696	11378696	8553170	2	673,73,	0,5100,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	11406954	11414078	chr7:11406954-11414078	3	+	11406954	11406954	8553170	3	212,86,265,	0,3490,6859,
#Partially deleted in new
chr7	11446301	11543059	chr7:11446301-11543059	0	-	11446301	11446301	8553170	4	23,195,213,98,	0,928,95117,96660,
#Partially deleted in new
chr7	11636611	11751353	chr7:11636611-11751353	0	-	11636611	11636611	8553170	2	350,217,	0,114525,
#Deleted in new
chr7	11820316	11821294	chr7:11820316-11821294	7	-	11820316	11820316	16724991	1	978,	0,
#Partially deleted in new
chr7	12211240	12233089	chr7:12211240-12233089	1	+	12214810	12231975	789624	8	185,219,64,160,141,50,54,1253,	0,3568,7217,12985,18438,19148,19821,20596,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	12211269	12230939	chr7:12211269-12230939	0	+	12214810	12215701	789624	7	156,219,201,64,160,141,551,	0,3539,4334,7188,12956,18409,19119,
#Partially deleted in new
chr7	12211295	12224274	chr7:12211295-12224274	0	+	12214810	12224274	789624	4	252,219,64,49,	0,3513,7162,12930,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	12211299	12243367	chr7:12211299-12243367	3	+	12214810	12231975	789624	9	126,194,219,64,160,141,50,54,11531,	0,2901,3509,7158,12926,18379,19089,19762,20537,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	12211308	12215707	chr7:12211308-12215707	0	+	12211308	12211308	8553170	3	239,219,104,	0,3500,4295,
#Partially deleted in new
chr7	12229747	12231529	chr7:12229747-12231529	0	+	12229747	12229747	8553170	3	72,50,468,	0,641,1314,
#Partially deleted in new
chr7	12230357	12232400	chr7:12230357-12232400	0	+	12230357	12230357	8553170	3	81,54,564,	0,704,1479,
#Partially deleted in new
chr7	12330884	12403905	chr7:12330884-12403905	3	-	12331182	12403716	789624	29	313,104,96,96,96,96,96,96,96,96,141,220,251,115,105,156,137,965,209,271,74,218,145,90,248,66,232,185,247,	0,2580,5256,6103,6292,9437,11174,12198,13310,13489,20688,25226,26380,28693,30262,30481,36472,38660,39771,42092,43804,44125,46891,48592,49601,52651,58242,62709,72774,
#Partially deleted in new
chr7	12330886	12333726	chr7:12330886-12333726	0	-	12330886	12330886	8553170	2	311,262,	0,2578,
#Partially deleted in new
chr7	12330917	12403941	chr7:12330917-12403941	0	-	12354323	12403716	789624	30	280,104,96,96,96,96,96,96,96,96,141,673,220,251,115,105,156,137,965,209,271,74,218,145,90,248,66,232,185,283,	0,2547,5223,6070,6259,9404,11141,12165,13277,13456,20655,22897,25193,26347,28660,30229,30448,36439,38627,39738,42059,43771,44092,46858,48559,49568,52618,58209,62676,72741,
#Partially deleted in new
chr7	12330917	12403941	chr7:12330917-12403941	0	-	12370829	12403716	789624	26	280,104,96,96,96,96,96,96,96,96,141,220,251,115,105,156,137,965,209,145,90,248,66,232,185,283,	0,2547,5223,6070,6259,9404,11141,12165,13277,13456,20655,25193,26347,28660,30229,30448,36439,38627,39738,46858,48559,49568,52618,58209,62676,72741,
#Partially deleted in new
chr7	12330917	12403941	chr7:12330917-12403941	1	-	12337073	12370813	789624	26	280,104,96,97,96,96,96,96,96,96,141,220,251,115,105,156,137,965,209,145,90,248,66,232,185,283,	0,2547,5223,6070,6259,9404,11141,12165,13277,13456,20655,25193,26347,28660,30229,30448,36439,38627,39738,46858,48559,49568,52618,58209,62676,72741,
#Partially deleted in new
chr7	12344373	12351713	chr7:12344373-12351713	0	-	12344373	12351713	8553170	3	96,222,141,	0,1365,7199,
#Partially deleted in new
chr7	12351572	12356330	chr7:12351572-12356330	0	-	12351572	12356330	789624	3	141,138,220,	0,2777,4538,
#Partially deleted in new
chr7	12377563	12403724	chr7:12377563-12403724	0	-	12388919	12403716	789624	8	357,90,248,66,150,232,185,66,	0,1913,2922,5972,11244,11563,16030,26095,
#Deleted in new
chr7	12439418	12440404	chr7:12439418-12440404	7	-	12439418	12439418	16724991	1	986,	0,
#Deleted in new
chr7	12471351	12472545	chr7:12471351-12472545	7	+	12471351	12471351	16724991	1	1194,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	12483343	12541270	chr7:12483343-12541270	3	+	12523123	12540923	789624	7	672,108,456,85,143,80,351,	0,3620,39627,42476,45558,47669,57576,
#Deleted in new
chr7	12491094	12492004	chr7:12491094-12492004	7	+	12491094	12491094	16724991	1	910,	0,
#Partially deleted in new
chr7	12496428	12541910	chr7:12496428-12541910	0	+	12496428	12496428	789624	7	211,85,143,80,147,324,104,	0,29391,32473,34584,41881,44491,45378,
#Partially deleted in new
chr7	12504398	12528928	chr7:12504398-12528928	0	+	12504543	12528928	789624	3	148,85,27,	0,21421,24503,
#Partially deleted in new
chr7	12504423	12541135	chr7:12504423-12541135	0	+	12504423	12504423	789624	4	123,143,80,216,	0,24478,26589,36496,
#Partially deleted in new
chr7	12504543	12540923	chr7:12504543-12540923	1	+	12504543	12540923	789624	6	3,456,85,143,80,4,	0,18427,21276,24358,26469,36376,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	12506006	12507478	chr7:12506006-12507478	7	+	12506006	12506006	16724991	3	62,210,190,	0,796,1282,
#Deleted in new
chr7	12570124	12571392	chr7:12570124-12571392	3	-	12570124	12570124	8553170	2	724,187,	0,1081,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	12570576	12653104	chr7:12570576-12653104	0	+	12570786	12649506	0	15	409,155,162,150,93,133,89,216,122,91,171,122,78,61,517,	0,7487,10483,33937,52224,54433,55185,56007,58524,65468,69770,74007,78890,81264,82011,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	12570685	12660179	chr7:12570685-12660179	3	+	12570786	12652715	0	16	300,155,162,150,93,133,89,216,122,91,171,178,122,78,61,7592,	0,7378,10374,33828,52115,54324,55076,55898,58415,65359,69661,73452,73898,78781,81155,81902,
#Partially deleted in new
chr7	12570718	12581105	chr7:12570718-12581105	0	+	12570786	12581105	789624	4	267,81,155,46,	0,826,7345,10341,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	12570720	12578150	chr7:12570720-12578150	0	+	12570786	12577651	789624	3	265,218,87,	0,6821,7343,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	12589428	12622884	chr7:12589428-12622884	0	+	12596387	12622884	789624	4	145,157,150,84,	0,6841,15085,33372,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	12589432	12653602	chr7:12589432-12653602	1	+	12622875	12652715	0	14	141,150,93,133,89,216,122,91,171,178,122,78,61,1015,	0,15081,33368,35577,36329,37151,39668,46612,50914,54705,55151,60034,62408,63155,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	12595548	12625071	chr7:12595548-12625071	0	+	12595548	12595548	8553170	4	253,150,93,62,	0,8965,27252,29461,
#Partially deleted in new
chr7	12611030	12629111	chr7:12611030-12629111	0	+	12611030	12611030	8553170	6	114,93,133,89,216,11,	0,11770,13979,14731,15553,18070,
#Partially deleted in new
chr7	12622837	12626541	chr7:12622837-12626541	0	+	12622837	12622837	8553170	3	56,133,780,	0,2172,2924,
#Deleted in new
chr7	12654178	12654985	chr7:12654178-12654985	3	+	12654178	12654178	8553170	2	307,125,	0,682,
#Deleted in new
chr7	12685636	12686033	chr7:12685636-12686033	7	+	12685636	12685636	16724991	1	397,	0,
#Deleted in new
chr7	12686855	12689179	chr7:12686855-12689179	1	+	12688254	12688857	789624	3	188,94,1014,	0,779,1310,
#Deleted in new
chr7	12686907	12689176	chr7:12686907-12689176	1	+	12688254	12688857	789624	2	136,1011,	0,1258,
#Deleted in new
chr7	12686907	12689176	chr7:12686907-12689176	1	+	12688254	12688857	789624	2	136,1008,	0,1261,
#Deleted in new
chr7	12687124	12688406	chr7:12687124-12688406	0	+	12688254	12688406	789624	2	604,241,	0,1041,
#Deleted in new
chr7	12687285	12690934	chr7:12687285-12690934	3	+	12688254	12688857	789624	2	443,2769,	0,880,
#Deleted in new
chr7	12687634	12688914	chr7:12687634-12688914	1	+	12688254	12688857	789624	2	94,746,	0,534,
#Deleted in new
chr7	12700757	12700889	chr7:12700757-12700889	3	-	12700757	12700757	8553170	1	132,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	12726151	13704540	chr7:12726151-13704540	1	+	12726151	12726151	8553170	8	264,91,128,124,115,87,61,479,	0,27869,32037,491393,584057,910494,976164,977910,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	12802248	13704540	chr7:12802248-13704540	0	+	12802248	12802248	8553170	6	484,124,115,87,61,479,	0,415296,507960,834397,900067,901813,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	12876683	12876946	chr7:12876683-12876946	3	+	12876683	12876683	8553170	1	263,	0,
#Deleted in new
chr7	12922544	12922920	chr7:12922544-12922920	7	-	12922544	12922544	16724991	1	376,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	13101390	13102389	chr7:13101390-13102389	0	+	13101390	13101390	8553170	2	193,382,	0,617,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	13339200	13365049	chr7:13339200-13365049	3	-	13339200	13339200	8553170	5	319,158,119,208,38,	0,902,22243,25132,25811,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	13717214	13751920	chr7:13717214-13751920	1	+	13717214	13717214	8553170	7	682,116,112,73,178,82,1399,	0,3943,11364,14265,26219,29503,33307,
#Partially deleted in new
chr7	13854354	13859025	chr7:13854354-13859025	3	-	13854354	13854354	8553170	2	268,91,	0,4580,
#Partially deleted in new
chr7	13871855	13872513	chr7:13871855-13872513	7	+	13871855	13871855	16724991	2	341,90,	0,568,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	13891227	13989946	chr7:13891227-13989946	3	-	13895865	13989052	0	14	4860,102,170,69,69,248,189,130,54,48,88,132,197,384,	0,9510,15202,18404,20011,40274,44480,47889,86199,95410,96858,97780,98040,98335,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	13891232	13991425	chr7:13891232-13991425	1	-	13895865	13989052	0	13	4855,102,170,69,69,248,189,130,48,88,132,150,98,	0,9505,15197,18399,20006,40269,44475,47884,95405,96853,97775,99320,100095,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	13891232	13986514	chr7:13891232-13986514	1	-	13895865	13986176	0	9	4855,102,170,69,69,248,130,54,399,	0,9505,15197,18399,20006,40269,47884,86194,94883,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	13891232	13986514	chr7:13891232-13986514	1	-	13895865	13986176	0	9	4855,102,170,69,69,248,189,130,399,	0,9505,15197,18399,20006,40269,44475,47884,94883,
#Partially deleted in new
chr7	13893029	13989676	chr7:13893029-13989676	1	-	13895865	13989052	0	12	3058,102,170,69,248,189,130,54,48,88,132,114,	0,7708,13400,16602,38472,42678,46087,84397,93608,95056,95978,96533,
#Partially deleted in new
chr7	13893267	13988873	chr7:13893267-13988873	1	-	13895865	13988766	789624	12	2820,102,170,69,69,248,189,130,54,48,88,194,	0,7470,13162,16364,17971,38234,42440,45849,84159,93370,94818,95412,
#Partially deleted in new
chr7	13894154	13986514	chr7:13894154-13986514	1	-	13895865	13986176	0	10	1933,102,170,69,69,248,189,130,54,399,	0,6583,12275,15477,17084,37347,41553,44962,83272,91961,
#Partially deleted in new
chr7	13894380	13989947	chr7:13894380-13989947	1	-	13895865	13989052	0	13	1707,102,170,69,69,248,189,130,54,48,88,132,385,	0,6357,12049,15251,16858,37121,41327,44736,83046,92257,93705,94627,95182,
#Partially deleted in new
chr7	13895735	13990690	chr7:13895735-13990690	0	-	13906499	13989052	789624	15	352,102,170,64,69,69,248,189,130,54,48,88,132,197,138,	0,5002,10694,12057,13896,15503,35766,39972,43381,81691,90902,92350,93272,93532,94817,
#Partially deleted in new
chr7	13895857	13991249	chr7:13895857-13991249	1	-	13895865	13989052	0	12	230,102,170,69,69,248,189,130,48,88,132,128,	0,4880,10572,13774,15381,35644,39850,43259,90780,92228,93150,95264,
#Partially deleted in new
chr7	13900372	13906498	chr7:13900372-13906498	0	-	13900372	13900372	8553170	2	467,69,	0,6057,
#Partially deleted in new
chr7	13906197	13985489	chr7:13906197-13985489	0	-	13906197	13906197	8553170	8	402,69,69,248,189,130,54,135,	0,3434,5041,25304,29510,32919,71229,79157,
#Partially deleted in new
chr7	13906500	13986452	chr7:13906500-13986452	0	-	13906500	13986176	789624	7	99,69,69,248,189,130,337,	0,3131,4738,25001,29207,32616,79615,
#Partially deleted in new
chr7	13911246	13985520	chr7:13911246-13985520	0	-	13911246	13911246	8553170	6	61,248,189,130,54,166,	0,20255,24461,27870,66180,74108,
#Partially deleted in new
chr7	13911281	13986441	chr7:13911281-13986441	0	-	13911281	13986176	789624	5	26,248,130,54,326,	0,20220,27835,66145,74834,
#Partially deleted in new
chr7	13931641	13987025	chr7:13931641-13987025	0	-	13931641	13931641	8553170	6	108,189,130,54,48,55,	0,4066,7475,45785,54996,55329,
#Partially deleted in new
chr7	13935710	13988513	chr7:13935710-13988513	0	-	13935710	13935710	8553170	5	186,130,54,48,428,	0,3406,41716,50927,52375,
#Partially deleted in new
chr7	13935892	13991425	chr7:13935892-13991425	0	-	13935892	13989052	789624	7	4,130,54,48,88,132,98,	0,3224,41534,50745,52193,53115,55435,
#Partially deleted in new
chr7	13939195	13991384	chr7:13939195-13991384	0	-	13939195	13989052	789624	7	51,54,48,88,132,150,57,	0,38231,47442,48890,49812,51357,52132,
#Partially deleted in new
chr7	13958756	13989103	chr7:13958756-13989103	0	-	13958756	13958756	8553170	5	284,54,48,88,96,	0,18670,27881,29329,30251,
#Partially deleted in new
chr7	13974863	13989639	chr7:13974863-13989639	0	-	13974863	13974863	8553170	6	223,54,48,88,132,77,	0,2563,11774,13222,14144,14699,
#Deleted in new
chr7	13988158	13989666	chr7:13988158-13989666	0	-	13988158	13989052	789624	3	15,132,399,	0,849,1109,
#Deleted in new
chr7	13989307	13990489	chr7:13989307-13990489	0	-	13989307	13989307	8553170	3	157,314,79,	0,255,1103,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	14010668	14010763	chr7:14010668-14010763	3	-	14010668	14010668	8553170	1	95,	0,
#Deleted in new
chr7	14070534	14071380	chr7:14070534-14071380	7	-	14070534	14070534	16724991	1	846,	0,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr7	14145048	14841450	chr7:14145048-14841450	1	-	14149130	14841263	789624	25	4190,61,121,196,91,65,161,90,86,75,74,117,36,99,117,89,118,120,75,50,144,154,21,77,257,	0,31790,32982,193466,200252,333112,429163,435813,438003,462385,468291,476329,485187,527880,537504,537704,540196,549026,553046,556632,573493,590992,608879,612606,696145,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr7	14145048	14903361	chr7:14145048-14903361	3	-	14149130	14841263	789624	26	4190,61,121,196,91,65,161,90,86,75,74,117,36,99,117,89,118,120,75,50,144,154,21,77,257,233,	0,31790,32982,193466,200252,333112,429163,435813,438003,462385,468291,476329,485187,527880,537504,537704,540196,549026,553046,556632,573493,590992,608879,612606,696145,758080,
#Partially deleted in new
chr7	14146233	14902690	chr7:14146233-14902690	1	-	14149130	14841263	789624	26	3005,61,121,196,91,65,161,90,86,75,74,117,33,99,117,89,118,120,75,50,144,154,21,77,257,99,	0,30605,31797,192281,199067,331927,427978,434628,436818,461200,467106,475144,484002,526695,536319,536519,539011,547841,551861,555447,572308,589807,607694,611421,694960,756358,
#Partially deleted in new
chr7	14148308	14902842	chr7:14148308-14902842	1	-	14149130	14841263	789624	25	930,61,121,196,91,65,161,90,86,75,74,117,33,99,117,89,118,120,75,50,144,154,77,257,251,	0,28530,29722,190206,196992,329852,425903,432553,434743,459125,465031,473069,481927,524620,534244,534444,536936,545766,549786,553372,570233,587732,609346,692885,754283,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	14149156	14269201	chr7:14149156-14269201	0	-	14149156	14149156	8553170	4	82,61,121,303,	0,27682,28874,119742,
#Partially deleted in new
chr7	14175972	14841347	chr7:14175972-14841347	1	-	14176823	14841263	789624	24	927,121,196,91,65,161,90,86,75,74,117,36,99,117,89,118,120,75,50,144,154,21,77,154,	0,2058,162542,169328,302188,398239,404889,407079,431461,437367,445405,454263,496956,506580,506780,509272,518102,522122,525708,542569,560068,577955,581682,665221,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	14190794	14192157	chr7:14190794-14192157	7	+	14190794	14190794	16724991	1	1363,	0,
#Partially deleted in new
chr7	14209071	14902999	chr7:14209071-14902999	0	-	14209071	14209071	8553170	23	478,196,91,65,161,90,86,75,74,117,33,99,117,89,118,120,75,50,144,154,77,257,408,	0,129443,136229,269089,365140,371790,373980,398362,404268,412306,421164,463857,473481,473681,476173,485003,489023,492609,509470,526969,548583,632122,693520,
#Partially deleted in new
chr7	14580902	14736169	chr7:14580902-14736169	0	-	14580902	14580902	8553170	7	49,86,75,74,117,144,129,	0,2149,26531,32437,40475,137639,155138,
#Partially deleted in new
chr7	14621140	14902842	chr7:14621140-14902842	0	-	14621140	14621140	8553170	15	354,33,99,117,89,118,120,75,50,144,154,21,77,257,251,	0,9095,51788,61412,61612,64104,72934,76954,80540,97401,114900,132787,136514,220053,281451,
#Partially deleted in new
chr7	14694076	14718880	chr7:14694076-14718880	0	-	14694076	14694076	8553170	4	118,75,50,339,	0,4018,7604,24465,
#Partially deleted in new
chr7	14736137	14974777	chr7:14736137-14974777	0	-	14736137	14841263	789624	5	57,21,77,257,82,	0,17790,21517,105056,238558,
#Partially deleted in new
chr7	14736137	14902908	chr7:14736137-14902908	0	-	14736137	14736137	8553170	4	57,21,77,317,	0,17790,21517,166454,
#Partially deleted in new
chr7	14736173	14903366	chr7:14736173-14903366	0	-	14736173	14736173	8553170	4	21,42,257,238,	0,21516,105020,166955,
#Partially deleted in new
chr7	14814130	14816565	chr7:14814130-14816565	3	+	14814130	14814130	8553170	3	16,77,170,	0,1033,2265,
#Partially deleted in new
chr7	14985377	14986074	chr7:14985377-14986074	7	-	14985377	14985377	16724991	1	697,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	15066206	15068651	chr7:15066206-15068651	3	+	15066206	15066206	8553170	2	306,347,	0,2098,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	15200317	15562015	chr7:15200317-15562015	3	-	15201284	15561845	789624	13	1042,106,83,117,135,80,66,67,96,104,152,131,296,	0,165196,165822,185128,187088,190353,190522,193795,218240,230687,344454,359823,361402,
#Partially deleted in new
chr7	15306234	15366187	chr7:15306234-15366187	0	-	15306457	15366187	789624	3	331,106,48,	0,59279,59905,
#Partially deleted in new
chr7	15358213	15366222	chr7:15358213-15366222	0	-	15358409	15366222	789624	3	232,106,83,	0,7300,7926,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	15394112	15396594	chr7:15394112-15396594	0	-	15394112	15394112	8553170	2	67,549,	0,1933,
#Partially deleted in new
chr7	15611211	15686812	chr7:15611211-15686812	3	-	15612386	15686402	789624	3	1400,173,927,	0,15534,74674,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	15667946	15681980	chr7:15667946-15681980	3	+	15667946	15667946	789624	4	350,141,185,3067,	0,8073,9516,10967,
#Partially deleted in new
chr7	15688377	15695491	chr7:15688377-15695491	3	+	15688377	15688377	8553170	2	75,622,	0,6492,
#Deleted in new
chr7	15689074	15690854	chr7:15689074-15690854	3	-	15689074	15689074	8553170	2	155,157,	0,1623,
#Deleted in new
chr7	15701434	15701752	chr7:15701434-15701752	7	-	15701434	15701434	16724991	1	318,	0,
#Partially deleted in new
chr7	15841296	15842360	chr7:15841296-15842360	3	-	15841296	15841296	8553170	2	131,197,	0,867,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	16087526	16421322	chr7:16087526-16421322	3	-	16091694	16421322	0	10	4273,132,93,93,98,46,105,150,277,257,	0,128539,170863,171393,190602,213894,220996,288565,318534,333539,
#Partially deleted in new
chr7	16091191	16421322	chr7:16091191-16421322	1	-	16091694	16421322	0	9	608,132,93,93,98,46,105,277,257,	0,124874,167198,167728,186937,210229,217331,314869,329874,
#Deleted in new
chr7	16208944	16209265	chr7:16208944-16209265	7	+	16208944	16208944	16724991	1	321,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	16210487	16270604	chr7:16210487-16270604	3	+	16210487	16210487	789624	5	116,105,198,85,1748,	0,26821,51411,55739,58369,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	16210506	16237406	chr7:16210506-16237406	0	+	16210506	16210506	8553170	3	97,237,98,	0,5826,26802,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	16210541	16248089	chr7:16210541-16248089	0	+	16210541	16210541	8553170	4	62,186,102,205,	0,5842,26767,37343,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	16210543	16269247	chr7:16210543-16269247	0	+	16210543	16210543	789624	5	60,78,44,85,391,	0,25358,26765,55683,58313,
#Deleted in new
chr7	16269248	16270604	chr7:16269248-16270604	0	+	16269248	16269248	8553170	2	342,88,	0,1268,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	16276576	16301466	chr7:16276576-16301466	0	-	16276576	16276576	8553170	3	785,98,46,	0,1552,24844,
#Deleted in new
chr7	16461480	16465849	chr7:16461480-16465849	3	-	16462547	16465668	789624	2	1483,386,	0,3983,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	16461542	16530580	chr7:16461542-16530580	1	-	16462547	16465668	789624	5	1421,72,394,130,394,	0,2773,3921,34837,68644,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	16471183	16471373	chr7:16471183-16471373	3	+	16471183	16471183	8553170	1	190,	0,
#Partially deleted in new
chr7	16526879	16537692	chr7:16526879-16537692	0	+	16526952	16532680	789624	4	163,74,151,66,	0,5615,5791,10747,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	16526889	16537144	chr7:16526889-16537144	0	+	16526889	16526889	8553170	3	153,74,219,	0,5605,10036,
#Partially deleted in new
chr7	16526895	16581568	chr7:16526895-16581568	3	+	16526952	16581489	789624	9	147,74,70,82,111,90,153,28,245,	0,5599,10731,30464,31993,39417,40495,53178,54428,
#Partially deleted in new
chr7	16583781	16586757	chr7:16583781-16586757	7	-	16583781	16583781	16724991	1	2976,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	16593625	16594224	chr7:16593625-16594224	3	-	16593625	16593625	8553170	1	599,	0,
#Partially deleted in new
chr7	16599775	16645817	chr7:16599775-16645817	3	-	16600760	16645573	789624	10	1170,130,129,136,215,161,99,139,65,311,	0,2604,4945,9854,10773,15968,25207,27264,36615,45731,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	16599781	16645755	chr7:16599781-16645755	0	-	16603645	16645573	789624	11	1164,130,112,129,136,215,161,99,139,65,249,	0,2598,3767,4939,9848,10767,15962,25201,27258,36609,45725,
#Partially deleted in new
chr7	16603645	16645817	chr7:16603645-16645817	1	-	16603645	16645573	789624	9	15,129,136,215,161,99,139,65,311,	0,1075,5984,6903,12098,21337,23394,32745,41861,
#Partially deleted in new
chr7	16625041	16645662	chr7:16625041-16645662	0	-	16644669	16645573	789624	5	40,139,65,187,156,	0,1998,11349,19584,20465,
#Partially deleted in new
chr7	16627090	16645816	chr7:16627090-16645816	0	-	16627090	16627090	8553170	4	88,65,128,310,	0,9300,17594,18416,
#Deleted in new
chr7	16644669	16645573	chr7:16644669-16645573	1	-	16644669	16645573	789624	2	143,67,	0,837,
#Partially deleted in new
chr7	16646130	16706523	chr7:16646130-16706523	3	+	16665443	16706088	789624	12	158,65,177,104,66,136,110,171,147,139,123,464,	0,19306,28281,35170,36649,39774,43666,48703,50784,51917,58416,59929,
#Partially deleted in new
chr7	16646130	16704662	chr7:16646130-16704662	0	+	16665443	16704662	789624	11	174,65,177,104,66,136,110,171,147,139,116,	0,19306,28281,35170,36649,39774,43666,48703,50784,51917,58416,
#Partially deleted in new
chr7	16646133	16706512	chr7:16646133-16706512	1	+	16665443	16706088	789624	12	171,65,177,104,66,136,110,171,147,139,123,453,	0,19303,28278,35167,36646,39771,43663,48700,50781,51914,58413,59926,
#Partially deleted in new
chr7	16646133	16706523	chr7:16646133-16706523	1	+	16665443	16689877	789624	11	155,65,177,104,66,110,171,147,139,123,464,	0,19303,28278,35167,36646,43663,48700,50781,51914,58413,59926,
#Partially deleted in new
chr7	16646159	16697047	chr7:16646159-16697047	0	+	16646159	16646159	8553170	7	145,65,177,104,66,110,133,	0,19277,28252,35141,36620,43637,50755,
#Partially deleted in new
chr7	16646159	16706523	chr7:16646159-16706523	0	+	16665443	16689877	789624	11	145,65,177,104,66,110,171,147,139,123,464,	0,19277,28252,35141,36620,43637,48674,50755,51888,58387,59900,
#Partially deleted in new
chr7	16646173	16706509	chr7:16646173-16706509	0	+	16665443	16686031	789624	12	115,65,177,104,66,117,110,171,147,139,123,450,	0,19263,28238,35127,36606,39750,43623,48660,50741,51874,58373,59886,
#Partially deleted in new
chr7	16646194	16706481	chr7:16646194-16706481	1	+	16674581	16706088	789624	11	94,177,104,66,136,110,171,147,139,123,422,	0,28217,35106,36585,39710,43602,48639,50720,51853,58352,59865,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	16661213	16687554	chr7:16661213-16687554	0	+	16661213	16661213	8553170	6	39,65,177,104,66,1650,	0,4223,13198,20087,21566,24691,
#Partially deleted in new
chr7	16661222	16695004	chr7:16661222-16695004	0	+	16665443	16695004	789624	8	30,65,177,104,66,136,110,171,	0,4214,13189,20078,21557,24682,28574,33611,
#Partially deleted in new
chr7	16661226	16706512	chr7:16661226-16706512	1	+	16685955	16706088	789624	12	26,65,177,104,66,117,110,171,27,25,123,453,	0,4210,13185,20074,21553,24697,28570,33607,35688,36935,43320,44833,
#Partially deleted in new
chr7	16661271	16689881	chr7:16661271-16689881	0	+	16665443	16689881	789624	7	41,65,177,104,66,136,85,	0,4165,13140,20029,21508,24633,28525,
#Partially deleted in new
chr7	16662132	16685987	chr7:16662132-16685987	0	+	16665443	16685987	789624	6	122,65,177,104,66,83,	0,3304,12279,19168,20647,23772,
#Partially deleted in new
chr7	16688524	16706197	chr7:16688524-16706197	1	+	16689837	16706088	789624	7	70,110,171,147,139,123,138,	0,1272,6309,8390,9523,16022,17535,
#Partially deleted in new
chr7	16695870	16719898	chr7:16695870-16719898	3	-	16695870	16695870	8553170	4	210,275,91,72,	0,2134,4875,23956,
#Partially deleted in new
chr7	16753534	16784536	chr7:16753534-16784536	3	+	16753967	16783491	789624	6	496,168,81,114,114,1120,	0,22676,23507,24263,25468,29882,
#Partially deleted in new
chr7	16775753	16779076	chr7:16775753-16779076	0	+	16775753	16775753	8553170	5	131,168,81,114,74,	0,457,1288,2044,3249,
#Partially deleted in new
chr7	16791810	16805080	chr7:16791810-16805080	3	-	16792907	16801796	0	8	1147,84,64,74,53,64,146,146,	0,3125,5820,7933,9340,9509,9847,13124,
#Partially deleted in new
chr7	16792639	16801196	chr7:16792639-16801196	0	-	16792950	16801196	789624	5	318,169,64,74,46,	0,2211,4991,7104,8511,
#Partially deleted in new
chr7	16794673	16804987	chr7:16794673-16804987	1	-	16794846	16801796	789624	7	346,64,74,53,64,146,35,	0,2957,5070,6477,6646,6984,10279,
#Partially deleted in new
chr7	16797630	16833433	chr7:16797630-16833433	0	-	16797630	16801796	789624	7	64,74,53,64,146,91,178,	0,2113,3520,3689,4027,14034,35625,
#Partially deleted in new
chr7	16799573	16804999	chr7:16799573-16804999	0	-	16799573	16799573	8553170	5	244,53,64,146,65,	0,1577,1746,2084,5361,
#Partially deleted in new
chr7	16801283	16804999	chr7:16801283-16804999	0	-	16801283	16801283	8553170	2	520,65,	0,3651,
#Deleted in new
chr7	16803144	16804995	chr7:16803144-16804995	0	-	16803144	16803144	8553170	2	56,61,	0,1790,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	16849956	16850725	chr7:16849956-16850725	7	-	16849956	16849956	16724991	1	769,	0,
#Partially deleted in new
chr7	16859404	16881987	chr7:16859404-16881987	3	-	16859581	16878618	0	8	227,84,64,77,53,64,136,44,	0,1095,1979,2579,3205,14375,19105,22539,
#Partially deleted in new
chr7	16860452	16881981	chr7:16860452-16881981	1	-	16860458	16878618	789624	7	131,64,77,53,64,136,38,	0,931,1531,2157,13327,18057,21491,
#Partially deleted in new
chr7	16860499	16881987	chr7:16860499-16881987	0	-	16860499	16881987	789624	6	84,64,77,53,64,44,	0,884,1484,2110,13280,21444,
#Deleted in new
chr7	16864266	16866308	chr7:16864266-16866308	7	-	16864266	16864266	16724991	1	2042,	0,
#Partially deleted in new
chr7	16873415	16881973	chr7:16873415-16881973	0	-	16873415	16873415	8553170	3	428,136,30,	0,5094,8528,
#Deleted in new
chr7	16888620	16888885	chr7:16888620-16888885	7	+	16888620	16888620	16724991	1	265,	0,
#Partially deleted in new
chr7	16916358	17204765	chr7:16916358-17204765	0	+	16916358	16916358	8553170	2	30,63,	0,288344,
#Deleted in new
chr7	16938224	16938557	chr7:16938224-16938557	7	+	16938224	16938224	16724991	1	333,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	16970319	17299288	chr7:16970319-17299288	3	-	16970319	16970319	8553170	3	1427,77,229,	0,288932,328740,
#Deleted in new
chr7	17033088	17033478	chr7:17033088-17033478	7	-	17033088	17033088	16724991	1	390,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	17132189	17346150	chr7:17132189-17346150	1	+	17296604	17343064	789624	15	352,63,753,89,133,188,107,90,124,131,203,110,142,1243,3230,	0,72513,114784,164107,164302,177746,190311,195569,197762,198566,201722,202697,203455,206796,210731,
#Partially deleted in new
chr7	17144252	17298453	chr7:17144252-17298453	1	-	17144252	17144252	8553170	5	536,87,223,77,102,	0,5867,24116,114999,154099,
#Partially deleted in new
chr7	17205651	17205928	chr7:17205651-17205928	3	+	17205651	17205651	8553170	1	277,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	17279833	17281303	chr7:17279833-17281303	0	-	17279833	17279833	8553170	2	468,63,	0,1407,
#Partially deleted in new
chr7	17279834	17298446	chr7:17279834-17298446	1	-	17279834	17279834	8553170	4	278,73,274,95,	0,1406,6408,18517,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	17279943	17281306	chr7:17279943-17281306	0	-	17279943	17279943	8553170	2	361,66,	0,1297,
#Partially deleted in new
chr7	17286274	17299357	chr7:17286274-17299357	0	-	17286274	17286274	8553170	2	242,298,	0,12785,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	17286276	17295222	chr7:17286276-17295222	0	-	17286276	17286276	8553170	3	240,70,57,	0,6094,8889,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	17286278	17298446	chr7:17286278-17298446	0	-	17286278	17286278	8553170	3	238,108,95,	0,8887,12073,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	17298621	17346150	chr7:17298621-17346150	3	+	17299264	17343064	0	11	708,188,107,90,124,131,203,110,142,1243,3230,	0,11314,23879,29137,31330,32134,35290,36265,37023,40364,44299,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	17298682	17346152	chr7:17298682-17346152	0	+	17299264	17343064	0	12	647,188,107,90,124,131,203,110,142,1243,933,902,	0,11253,23818,29076,31269,32073,35229,36204,36962,40303,44238,46568,
#Partially deleted in new
chr7	17299294	17467234	chr7:17299294-17467234	3	+	17299294	17451015	789624	12	35,188,107,90,124,131,203,110,142,1243,67,1083,	0,10641,23206,28464,30657,31461,34617,35592,36350,39691,151700,166857,
#Partially deleted in new
chr7	17329857	17333950	chr7:17329857-17333950	0	+	17329857	17329857	8553170	3	218,131,39,	0,898,4054,
#Deleted in new
chr7	17334909	17336075	chr7:17334909-17336075	0	+	17334909	17334909	8553170	2	87,431,	0,735,
#Partially deleted in new
chr7	17335644	17339527	chr7:17335644-17339527	0	+	17335644	17335644	8553170	2	142,542,	0,3341,
#Deleted in new
chr7	17373200	17373326	chr7:17373200-17373326	3	-	17373200	17373200	8553170	1	126,	0,
#Partially deleted in new
chr7	17374866	17466664	chr7:17374866-17466664	0	+	17374866	17374866	789624	4	189,68,67,513,	0,74014,76128,91285,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	17402667	17467256	chr7:17402667-17467256	3	+	17402667	17402667	8553170	6	78,93,65,68,67,1105,	0,5368,36999,46213,48327,63484,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	17406072	17466538	chr7:17406072-17466538	0	+	17406072	17406072	8553170	6	292,93,65,68,67,387,	0,1963,33594,42808,44922,60079,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	17434476	17460672	chr7:17434476-17460672	1	-	17434476	17434476	8553170	5	24,158,85,131,191,	0,471,22201,22982,26005,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	17436029	17457436	chr7:17436029-17457436	0	-	17436029	17436029	8553170	3	204,81,103,	0,20652,21304,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	17463444	17558909	chr7:17463444-17558909	1	-	17463444	17463444	789624	4	98,57,129,158,	0,1725,19961,95307,
#Partially deleted in new
chr7	17679548	17680659	chr7:17679548-17680659	3	+	17679548	17679548	8553170	2	74,199,	0,912,
#Partially deleted in new
chr7	17790760	17940494	chr7:17790760-17940494	3	-	17794044	17940295	789624	26	3532,113,69,146,72,162,111,108,140,70,38,133,105,194,100,89,139,84,89,102,122,122,90,103,113,211,	0,6066,7929,8248,10827,12658,24073,25421,30748,35261,39249,43291,44000,49046,54834,59586,60065,77646,82767,84719,84908,99602,100785,102571,106573,149523,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr7	17792841	17940468	chr7:17792841-17940468	1	-	17796818	17940295	789624	25	4098,69,146,72,162,111,108,173,70,38,133,105,194,100,89,139,84,89,102,122,122,90,103,113,185,	0,5848,6167,8746,10577,21992,23340,28667,33180,37168,41210,41919,46965,52753,57505,57984,75565,80686,82638,82827,97521,98704,100490,104492,147442,
#Partially deleted in new
chr7	17793419	17940451	chr7:17793419-17940451	0	-	17888697	17940295	789624	27	873,113,69,146,72,162,111,108,140,70,38,133,105,194,100,89,139,84,89,102,122,163,122,90,103,113,168,	0,3407,5270,5589,8168,9999,21414,22762,28089,32602,36590,40632,41341,46387,52175,56927,57406,74987,80108,82060,82249,95140,96943,98126,99912,103914,146864,
#Partially deleted in new
chr7	17793763	17821697	chr7:17793763-17821697	0	-	17793763	17793763	8553170	9	529,113,69,146,72,162,111,108,189,	0,3063,4926,5245,7824,9655,21070,22418,27745,
#Partially deleted in new
chr7	17816219	17940501	chr7:17816219-17940501	0	-	17891628	17940295	789624	18	70,140,70,38,133,105,194,100,89,139,84,89,102,122,122,90,113,218,	0,5289,9802,13790,17832,18541,23587,29375,34127,34606,52187,57308,59260,59449,74143,75326,81114,124064,
#Partially deleted in new
chr7	17868281	17940431	chr7:17868281-17940431	0	-	17868281	17868281	8553170	10	209,89,102,122,122,90,103,113,41,148,	0,5246,7198,7387,22081,23264,25050,29052,29562,72002,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	17879426	17940484	chr7:17879426-17940484	1	-	17882813	17940295	789624	6	3517,122,90,103,113,201,	0,10936,12119,13905,17907,60857,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	17888155	17900106	chr7:17888155-17900106	0	-	17888155	17888155	8553170	6	2329,90,103,113,41,1280,	0,3390,5176,9178,9688,10671,
#Partially deleted in new
chr7	17891545	17940488	chr7:17891545-17940488	0	-	17891545	17891545	8553170	5	90,103,113,92,205,	0,1786,5788,15703,48738,
#Partially deleted in new
chr7	17891545	17940491	chr7:17891545-17940491	0	-	17891545	17891545	8553170	4	83,103,113,208,	0,1786,5788,48738,
#Partially deleted in new
chr7	17897333	17940491	chr7:17897333-17940491	0	-	17897333	17897333	8553170	4	113,41,92,208,	0,510,9915,42950,
#Deleted in new
chr7	17940502	17942922	chr7:17940502-17942922	3	+	17940502	17940502	8553170	1	2420,	0,
#Partially deleted in new
chr7	17962078	17963029	chr7:17962078-17963029	7	+	17962078	17962078	16724991	1	951,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	18000289	18000879	chr7:18000289-18000879	3	-	18000289	18000289	8553170	1	590,	0,
#Deleted in new
chr7	18026773	18027863	chr7:18026773-18027863	1	-	18026825	18027782	789624	1	1090,	0,
#Deleted in new
chr7	18026825	18027782	chr7:18026825-18027782	3	-	18026825	18027782	789624	1	957,	0,
#Partially deleted in new
chr7	18086948	18666923	chr7:18086948-18666923	3	+	18162324	18666527	789624	13	265,121,60,63,242,142,127,122,116,123,214,218,711,	0,75280,371893,409313,498332,503396,504567,506959,547678,557722,560836,561517,579264,
#Partially deleted in new
chr7	18087882	18162628	chr7:18087882-18162628	0	+	18087882	18087882	8553170	2	153,400,	0,74346,
#Partially deleted in new
chr7	18151774	18327612	chr7:18151774-18327612	0	+	18151774	18151774	8553170	4	105,121,81,164,	0,10454,173737,175674,
#Partially deleted in new
chr7	18290091	18585326	chr7:18290091-18585326	0	+	18496302	18585326	789624	4	424,69,63,46,	0,105023,206170,295189,
#Partially deleted in new
chr7	18290187	18327758	chr7:18290187-18327758	0	+	18290187	18290187	8553170	4	160,75,81,310,	0,253,35324,37261,
#Partially deleted in new
chr7	18290421	18590486	chr7:18290421-18590486	0	+	18496302	18590486	789624	4	94,63,242,151,	0,205840,294859,299914,
#Partially deleted in new
chr7	18290421	18829392	chr7:18290421-18829392	0	+	18290421	18290421	8553170	17	94,63,242,151,127,122,116,123,214,218,264,178,134,121,50,108,232,	0,205840,294859,299914,301094,303486,344205,354249,357363,358044,375791,437158,458583,471735,476684,502923,538739,
#Partially deleted in new
chr7	18290449	18496746	chr7:18290449-18496746	0	+	18290449	18290449	8553170	2	66,485,	0,205812,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	18429061	18430738	chr7:18429061-18430738	3	-	18429061	18429061	8553170	2	286,260,	0,1417,
#Partially deleted in new
chr7	18495709	18591544	chr7:18495709-18591544	0	+	18496302	18591544	789624	5	314,63,242,151,29,	0,552,89571,94626,95806,
#Partially deleted in new
chr7	18495714	18590376	chr7:18495714-18590376	0	+	18585351	18590376	789624	5	140,63,59,242,41,	0,547,6866,89566,94621,
#Partially deleted in new
chr7	18495738	18590354	chr7:18495738-18590354	0	+	18495738	18495738	8553170	5	285,63,506,242,19,	0,523,47430,89542,94597,
#Partially deleted in new
chr7	18495745	18668843	chr7:18495745-18668843	1	+	18496302	18666527	789624	12	109,63,242,142,127,122,132,116,123,214,218,2631,	0,516,89535,94599,95770,98162,133604,138881,148925,152039,152720,170467,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr7	18495745	19002416	chr7:18495745-19002416	1	+	18496302	18996062	789624	26	109,63,242,142,127,122,132,116,123,214,218,264,178,134,121,50,108,56,88,120,98,119,134,85,148,6394,	0,516,89535,94599,95770,98162,133604,138881,148925,152039,152720,170467,231834,253259,266411,271360,297599,333415,333715,339721,340154,378732,440063,458400,480060,500277,
#Partially deleted in new
chr7	18495745	18668837	chr7:18495745-18668837	1	+	18496302	18666527	789624	11	278,63,242,151,127,122,116,123,214,218,2625,	0,516,89535,94590,95770,98162,138881,148925,152039,152720,170467,
#Partially deleted in new
chr7	18495755	18667105	chr7:18495755-18667105	1	+	18496302	18666527	789624	11	99,63,242,142,127,122,116,123,214,218,893,	0,506,89525,94589,95760,98152,138871,148915,152029,152710,170457,
#Partially deleted in new
chr7	18495760	18506036	chr7:18495760-18506036	0	+	18495760	18495760	8553170	5	263,63,134,59,209,	0,501,6592,6820,10067,
#Partially deleted in new
chr7	18496166	18668843	chr7:18496166-18668843	1	+	18496218	18666527	789624	10	158,242,151,127,122,116,123,214,218,2631,	0,89114,94169,95349,97741,138460,148504,151618,152299,170046,
#Partially deleted in new
chr7	18496175	18591544	chr7:18496175-18591544	0	+	18496302	18585386	789624	4	149,231,151,29,	0,89116,94160,95340,
#Partially deleted in new
chr7	18496261	18996197	chr7:18496261-18996197	1	+	18496302	18996062	789624	24	63,242,151,127,122,116,123,214,218,264,178,134,121,50,108,56,88,120,98,119,134,85,148,175,	0,89019,94074,95254,97646,138365,148409,151523,152204,169951,231318,252743,265895,270844,297083,332899,333199,339205,339638,378216,439547,457884,479544,499761,
#Partially deleted in new
chr7	18496302	18954316	chr7:18496302-18954316	1	+	18496302	18954253	789624	23	22,242,142,127,122,132,116,123,214,218,264,178,134,121,50,108,56,88,120,98,119,134,171,	0,88978,94042,95213,97605,133047,138324,148368,151482,152163,169910,231277,252702,265854,270803,297042,332858,333158,339164,339597,378175,439506,457843,
#Partially deleted in new
chr7	18496302	18996062	chr7:18496302-18996062	1	+	18496302	18996062	789624	25	22,242,151,127,122,132,116,123,214,218,264,178,134,121,50,108,56,88,120,98,119,134,85,148,40,	0,88978,94033,95213,97605,133047,138324,148368,151482,152163,169910,231277,252702,265854,270803,297042,332858,333158,339164,339597,378175,439506,457843,479503,499720,
#Partially deleted in new
chr7	18496302	18835649	chr7:18496302-18835649	0	+	18496302	18496302	8553170	19	22,242,142,127,122,132,116,123,214,218,264,178,134,121,50,108,56,88,183,	0,88978,94042,95213,97605,133047,138324,148368,151482,152163,169910,231277,252702,265854,270803,297042,332858,333158,339164,
#Partially deleted in new
chr7	18496496	18591533	chr7:18496496-18591533	0	+	18585351	18591533	789624	4	182,242,142,18,	0,88784,93848,95019,
#Partially deleted in new
chr7	18502607	18518071	chr7:18502607-18518071	0	+	18502607	18502607	8553170	2	32,414,	0,15050,
#Partially deleted in new
chr7	18509272	18666900	chr7:18509272-18666900	1	+	18585351	18666527	789624	11	174,242,151,127,122,132,116,123,214,218,688,	0,76008,81063,82243,84635,120077,125354,135398,138512,139193,156940,
#Partially deleted in new
chr7	18509312	18666979	chr7:18509312-18666979	1	+	18585351	18666527	789624	10	134,242,142,121,122,116,123,214,218,767,	0,75968,81032,82203,84595,125314,135358,138472,139153,156900,
#Partially deleted in new
chr7	18793158	18997299	chr7:18793158-18997299	0	+	18793158	18793158	8553170	10	294,56,88,120,98,119,134,85,148,1277,	0,36002,36302,42308,42741,81319,142650,160987,182647,202864,
#Deleted in new
chr7	18807992	18808279	chr7:18807992-18808279	3	-	18807992	18807992	8553170	1	287,	0,
#Partially deleted in new
chr7	18835908	18907034	chr7:18835908-18907034	0	+	18835908	18835908	8553170	3	89,119,97,	0,38569,71029,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	18851399	18996343	chr7:18851399-18996343	0	+	18851399	18851399	8553170	6	53,119,134,85,148,321,	0,23078,84409,102746,124406,144623,
#Partially deleted in new
chr7	18892095	18899433	chr7:18892095-18899433	3	-	18892095	18892095	8553170	3	107,81,125,	0,464,7213,
#Deleted in new
chr7	18948897	18949762	chr7:18948897-18949762	7	-	18948897	18948897	16724991	1	865,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	19020990	19116924	chr7:19020990-19116924	0	-	19116712	19116924	789624	4	111,115,47,254,	0,35060,92886,95680,
#Deleted in new
chr7	19112473	19114271	chr7:19112473-19114271	3	+	19112473	19112473	8553170	2	194,1517,	0,281,
#Deleted in new
chr7	19113046	19117118	chr7:19113046-19117118	0	-	19116712	19117118	789624	3	94,47,448,	0,830,3624,
#Deleted in new
chr7	19115467	19117672	chr7:19115467-19117672	3	-	19116712	19117321	0	2	664,1002,	0,1203,
#Deleted in new
chr7	19119932	19121916	chr7:19119932-19121916	3	+	19119932	19119932	8553170	2	556,136,	0,1848,
#Deleted in new
chr7	19144292	19146253	chr7:19144292-19146253	3	+	19144292	19144292	8553170	2	159,1367,	0,594,
#Deleted in new
chr7	19144781	19145421	chr7:19144781-19145421	3	-	19144861	19145362	789624	1	640,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	19353533	19578606	chr7:19353533-19578606	3	+	19353533	19353533	8553170	6	108,146,63,39,132,78,	0,1206,50167,51798,222753,224995,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	19695461	19709087	chr7:19695461-19709087	3	-	19698315	19709016	789624	4	3266,209,142,325,	0,4610,9317,13301,
#Deleted in new
chr7	19698564	19700335	chr7:19698564-19700335	0	-	19698564	19698564	8553170	2	163,264,	0,1507,
#Deleted in new
chr7	19705357	19705436	chr7:19705357-19705436	3	-	19705357	19705357	5263520	1	79,	0,
#Partially deleted in new
chr7	19719309	19773392	chr7:19719309-19773392	1	-	19722127	19772696	789624	5	2825,74,255,57,843,	0,4970,6204,10072,53240,
#Partially deleted in new
chr7	19719315	19773393	chr7:19719315-19773393	3	-	19722074	19772696	789624	4	2819,255,57,844,	0,6198,10066,53234,
#Partially deleted in new
chr7	19721777	19773598	chr7:19721777-19773598	1	-	19722127	19725768	789624	5	357,74,255,57,32,	0,2502,3736,7604,51789,
#Partially deleted in new
chr7	19721782	19773598	chr7:19721782-19773598	1	-	19724336	19725768	789624	5	352,72,255,57,32,	0,2497,3731,7599,51784,
#Partially deleted in new
chr7	19721852	19773194	chr7:19721852-19773194	1	-	19722074	19725768	789624	4	282,255,57,93,	0,3661,7529,51249,
#Partially deleted in new
chr7	19918980	19968237	chr7:19918980-19968237	1	-	19918980	19918980	8553170	4	280,112,73,101,	0,885,41941,49156,
#Partially deleted in new
chr7	19918991	20002922	chr7:19918991-20002922	0	-	19918991	19918991	8553170	4	269,73,259,203,	0,41930,49145,83728,
#Partially deleted in new
chr7	19919199	20140374	chr7:19919199-20140374	0	-	19919199	19919199	789624	6	61,73,259,41,59,58,	0,41722,48937,109719,126303,221117,
#Duplicated in new
chr7	19931070	20125162	chr7:19931070-20125162	3	-	19931070	19931070	8553170	6	228,73,259,41,59,83,	0,29851,37066,97848,114432,194009,
#Partially deleted in new
chr7	19931252	20140426	chr7:19931252-20140426	0	-	19931252	19931252	8553170	6	46,73,242,41,59,110,	0,29669,36901,97666,114250,209064,
#Partially deleted in new
chr7	19943218	20002844	chr7:19943218-20002844	1	-	19943218	19943218	8553170	4	270,73,242,125,	0,17703,24935,59501,
#Partially deleted in new
chr7	20002764	20003247	chr7:20002764-20003247	7	+	20002764	20002764	16724991	1	483,	0,
#Partially deleted in new
chr7	20096136	20130475	chr7:20096136-20130475	3	+	20096136	20096136	8553170	5	90,162,120,34,264,	0,8900,18015,32832,34075,
#Partially deleted in new
chr7	20133923	20140453	chr7:20133923-20140453	0	-	20133923	20133923	8553170	2	332,137,	0,6393,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	20134654	20217390	chr7:20134654-20217390	3	-	20140945	20161862	789624	7	6504,189,2042,123,144,65,92,	0,19538,23549,27093,29601,36059,82644,
#Partially deleted in new
chr7	20140624	20217404	chr7:20140624-20217404	1	-	20140945	20161862	789624	5	534,189,2042,123,106,	0,13568,17579,21123,76674,
#Partially deleted in new
chr7	20140916	20185078	chr7:20140916-20185078	1	-	20140945	20161862	789624	5	242,189,2042,123,90,	0,13276,17287,20831,44072,
#Partially deleted in new
chr7	20141915	20153531	chr7:20141915-20153531	3	+	20141915	20141915	5263520	4	105,111,155,268,	0,5511,8519,11348,
#Partially deleted in new
chr7	20164368	20217357	chr7:20164368-20217357	0	-	20164368	20164368	8553170	4	31,68,146,59,	0,6345,34156,52930,
#Partially deleted in new
chr7	20170227	20217352	chr7:20170227-20217352	0	-	20170227	20170227	8553170	2	554,54,	0,47071,
#Deleted in new
chr7	20217576	20221681	chr7:20217576-20221681	0	+	20217576	20217576	789624	4	46,108,174,339,	0,679,2006,3766,
#Deleted in new
chr7	20217585	20221692	chr7:20217585-20221692	3	+	20217585	20217585	789624	5	37,71,108,174,350,	0,202,670,1997,3757,
#Deleted in new
chr7	20219438	20221700	chr7:20219438-20221700	0	+	20219438	20219438	8553170	2	318,358,	0,1904,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	20298293	20300625	chr7:20298293-20300625	0	+	20298293	20298293	8553170	3	104,168,104,	0,1765,2228,
#Deleted in new
chr7	20305710	20311712	chr7:20305710-20311712	0	+	20305710	20305710	8553170	2	313,678,	0,5324,
#Deleted in new
chr7	20328298	20331681	chr7:20328298-20331681	0	-	20328298	20328298	789624	3	558,147,32,	0,1068,3351,
#Deleted in new
chr7	20328528	20331747	chr7:20328528-20331747	3	-	20328528	20328528	789624	4	328,147,93,98,	0,838,1161,3121,
#Partially deleted in new
chr7	20330701	20410330	chr7:20330701-20410330	1	+	20379067	20409997	789624	15	857,47,86,175,247,166,159,96,90,135,406,226,110,164,456,	0,1275,32935,36310,48349,49964,51025,60701,64194,68158,71019,73926,75360,78913,79173,
#Partially deleted in new
chr7	20331101	20399062	chr7:20331101-20399062	0	+	20331101	20331101	8553170	9	832,86,175,247,166,159,96,90,203,	0,32535,35910,47949,49564,50625,60301,63794,67758,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	20331122	20415754	chr7:20331122-20415754	3	+	20331806	20409997	789624	14	811,86,175,247,166,159,96,90,135,406,226,110,164,5880,	0,32514,35889,47928,49543,50604,60280,63773,67737,70598,73505,74939,78492,78752,
#Partially deleted in new
chr7	20331976	20353357	chr7:20331976-20353357	0	+	20331976	20331976	8553170	2	47,1043,	0,20338,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	20364644	20382081	chr7:20364644-20382081	0	+	20364644	20364644	8553170	2	2542,3031,	0,14406,
#Deleted in new
chr7	20377330	20377401	chr7:20377330-20377401	3	+	20377330	20377330	8553170	1	71,	0,
#Deleted in new
chr7	20582071	20583206	chr7:20582071-20583206	7	+	20582071	20582071	16724991	1	1135,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	20588989	20590085	chr7:20588989-20590085	7	+	20588989	20588989	16724991	2	101,489,	0,607,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr7	20615206	20757009	chr7:20615206-20757009	3	+	20623285	20755624	789624	28	631,74,55,151,55,192,172,125,178,114,111,126,204,171,162,141,144,105,78,84,204,101,141,157,198,207,147,1583,	0,8058,11350,13481,16852,27977,28254,30549,30754,32328,32761,34815,36213,43299,66298,70489,83200,84618,84851,89517,107809,111833,113108,123776,127670,130025,138153,140220,
#Deleted in new
chr7	20641557	20641948	chr7:20641557-20641948	7	-	20641557	20641557	16724991	1	391,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	20647329	20651696	chr7:20647329-20651696	0	+	20647329	20647329	8553170	5	45,114,111,126,277,	0,205,638,2692,4090,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	20647342	20667323	chr7:20647342-20667323	1	+	20651422	20666767	789624	6	306,111,126,204,171,565,	0,625,2679,4077,11163,19416,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	20647342	20660394	chr7:20647342-20660394	1	+	20651422	20659089	789624	6	306,111,126,204,171,1329,	0,625,2679,4077,11163,11723,
#Partially deleted in new
chr7	20647421	20755624	chr7:20647421-20755624	1	+	20651422	20755624	789624	19	227,111,126,204,171,162,141,144,105,78,84,204,101,141,157,198,207,147,198,	0,546,2600,3998,11084,34083,38274,50985,52403,52636,57302,75594,79618,80893,91561,95455,97810,105938,108005,
#Partially deleted in new
chr7	20723093	20777038	chr7:20723093-20777038	0	+	20723093	20763270	789624	8	126,101,141,157,198,207,213,1061,	0,3946,5221,15889,19783,22138,40162,52884,
#Deleted in new
chr7	20782282	20786886	chr7:20782282-20786886	1	-	20784289	20786798	789624	3	3046,341,109,	0,3172,4495,
#Deleted in new
chr7	20784286	20786886	chr7:20784286-20786886	3	-	20784289	20785762	789624	3	1509,96,109,	0,1661,2491,
#Deleted in new
chr7	20784286	20786886	chr7:20784286-20786886	1	-	20784289	20786798	789624	2	1509,109,	0,2491,
#Deleted in new
chr7	20827325	20827753	chr7:20827325-20827753	7	+	20827325	20827325	16724991	1	428,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	20835430	21023148	chr7:20835430-21023148	3	+	20835430	20835430	789624	6	74,77,136,49,94,17,	0,47309,185437,186428,186626,187701,
#Deleted in new
chr7	20843626	20843961	chr7:20843626-20843961	7	+	20843626	20843626	16724991	1	335,	0,
#Partially deleted in new
chr7	20959390	21028813	chr7:20959390-21028813	3	-	20959390	20959390	8553170	6	242,309,68,65,176,63,	0,4643,8665,15713,27303,69360,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	21215536	21215830	chr7:21215536-21215830	3	-	21215536	21215536	8553170	1	294,	0,
#Deleted in new
chr7	21220212	21221428	chr7:21220212-21221428	7	-	21220212	21220212	16724991	1	1216,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	21381362	21381506	chr7:21381362-21381506	3	+	21381362	21381362	8553170	1	144,	0,
#Partially deleted in new
chr7	21400919	21401613	chr7:21400919-21401613	7	-	21400919	21400919	16724991	2	226,142,	0,552,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	21428033	21514822	chr7:21428033-21514822	3	+	21428251	21511269	789624	6	225,116,1555,229,200,3801,	0,643,1255,49045,53890,82988,
#Partially deleted in new
chr7	21428042	21477239	chr7:21428042-21477239	0	+	21428251	21477239	789624	2	216,161,	0,49036,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	21428043	21514554	chr7:21428043-21514554	0	+	21428251	21477105	789624	5	215,116,229,200,3533,	0,633,49035,53880,82978,
#Deleted in new
chr7	21428194	21428900	chr7:21428194-21428900	0	+	21428194	21428194	8553170	2	64,224,	0,482,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	21428200	21514505	chr7:21428200-21514505	1	+	21428720	21511269	8553170	6	58,111,1555,229,200,3484,	0,481,1088,48878,53723,82821,
#Deleted in new
chr7	21471057	21471146	chr7:21471057-21471146	3	+	21471057	21471057	5263520	1	89,	0,
#Boundary problem: need 83, got 0, diff 83, mapped 0.0
chr7	21543214	21901568	chr7:21543214-21901568	1	+	21543245	21901254	789624	83	382,144,197,190,100,212,231,168,117,138,125,196,105,393,333,255,170,223,117,87,159,99,159,123,123,225,92,127,150,234,132,6,161,157,146,117,139,93,195,78,137,151,149,151,132,174,205,166,103,240,162,194,163,124,143,162,234,147,114,144,183,102,139,167,236,123,205,165,141,171,123,194,149,128,228,192,120,243,183,116,113,141,562,	0,1791,15587,16388,17856,20971,26854,28591,38690,44849,45297,45993,47703,47970,56572,57461,57795,58181,63211,63432,71899,72994,74404,75885,76741,92656,94396,95724,112617,115583,138331,138507,140569,143884,144167,147550,154860,159495,161219,162245,164484,167338,168497,174560,177510,182596,192425,195486,196356,198712,201223,201655,205365,206463,207007,222213,230551,235743,241212,243409,244186,246026,257922,264668,273252,275002,299329,309252,311100,318638,321320,323255,324644,325649,330059,337487,341076,349210,351408,351669,356121,356765,357792,
#Boundary problem: need 82, got 0, diff 82, mapped 0.0
chr7	21543214	21901839	chr7:21543214-21901839	3	+	21543245	21901254	789624	82	382,144,197,190,100,212,231,168,117,138,125,196,105,393,333,255,170,223,117,87,159,84,159,123,123,225,92,127,150,234,132,161,157,146,117,139,93,195,78,137,151,149,151,132,174,205,166,103,240,162,194,163,124,143,162,234,147,114,144,183,102,139,167,236,123,205,165,141,171,123,194,149,128,228,192,120,243,183,116,113,141,833,	0,1791,15587,16388,17856,20971,26854,28591,38690,44849,45297,45993,47703,47970,56572,57461,57795,58181,63211,63432,71899,72994,74404,75885,76741,92656,94396,95724,112617,115583,138331,140569,143884,144167,147550,154860,159495,161219,162245,164484,167338,168497,174560,177510,182596,192425,195486,196356,198712,201223,201655,205365,206463,207007,222213,230551,235743,241212,243409,244186,246026,257922,264668,273252,275002,299329,309252,311100,318638,321320,323255,324644,325649,330059,337487,341076,349210,351408,351669,356121,356765,357792,
#Partially deleted in new
chr7	21543214	21901321	chr7:21543214-21901321	1	+	21543245	21901254	789624	83	382,144,197,190,100,212,231,168,117,138,125,196,105,393,333,255,170,223,117,87,159,99,159,123,123,225,92,127,150,234,132,6,161,157,146,117,139,93,195,78,137,151,149,151,132,174,205,166,103,240,162,194,163,124,143,162,234,147,114,144,183,102,139,167,236,123,205,165,141,171,123,194,149,128,228,192,120,243,183,116,113,141,315,	0,1791,15587,16388,17856,20971,26854,28591,38690,44849,45297,45993,47703,47970,56572,57461,57795,58181,63211,63432,71899,72994,74404,75885,76741,92656,94396,95724,112617,115583,138331,138464,140569,143884,144167,147550,154860,159495,161219,162245,164484,167338,168497,174560,177510,182596,192425,195486,196356,198712,201223,201655,205365,206463,207007,222213,230551,235743,241212,243409,244186,246026,257922,264668,273252,275002,299329,309252,311100,318638,321320,323255,324644,325649,330059,337487,341076,349210,351408,351669,356121,356765,357792,
#Deleted in new
chr7	21543445	21545149	chr7:21543445-21545149	0	+	21543445	21543445	8553170	2	341,144,	0,1560,
#Partially deleted in new
chr7	21559714	21561446	chr7:21559714-21561446	0	+	21559714	21559714	8553170	2	78,376,	0,1356,
#Partially deleted in new
chr7	21561090	21570716	chr7:21561090-21570716	0	+	21561090	21561090	8553170	2	80,648,	0,8978,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	21618193	21636078	chr7:21618193-21636078	0	+	21618193	21618193	8553170	4	280,123,123,208,	0,906,1762,17677,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	21702709	21703773	chr7:21702709-21703773	0	+	21702709	21702709	8553170	2	93,325,	0,739,
#Partially deleted in new
chr7	21735639	21744919	chr7:21735639-21744919	0	+	21735639	21744919	789624	4	205,166,103,50,	0,3061,3931,9230,
#Partially deleted in new
chr7	21851562	21862011	chr7:21851562-21862011	0	+	21851562	21851562	8553170	4	79,165,141,159,	0,904,2752,10290,
#Partially deleted in new
chr7	21892624	21901116	chr7:21892624-21901116	0	+	21892624	21892624	8553170	5	43,377,113,141,110,	0,1998,6711,7355,8382,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	21900899	21945878	chr7:21900899-21945878	1	-	21902321	21916816	789624	11	1453,137,150,126,168,72,378,138,141,54,98,	0,2078,3210,4606,5389,5668,7230,10717,15854,39362,44881,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	21900900	21946084	chr7:21900900-21946084	3	-	21902321	21945804	789624	10	1452,137,150,126,168,72,378,138,141,304,	0,2077,3209,4605,5388,5667,7229,10716,15853,44880,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	21900900	21905709	chr7:21900900-21905709	0	-	21900900	21900900	8553170	4	1452,137,150,204,	0,2077,3209,4605,
#Partially deleted in new
chr7	21901798	21945884	chr7:21901798-21945884	1	-	21902321	21945804	789624	9	554,137,150,126,168,72,378,141,104,	0,1179,2311,3707,4490,4769,6331,14955,43982,
#Deleted in new
chr7	21902653	21904259	chr7:21902653-21904259	0	-	21902969	21904259	789624	2	461,150,	0,1456,
#Partially deleted in new
chr7	21903758	21905575	chr7:21903758-21905575	0	-	21903758	21903758	8553170	2	501,70,	0,1747,
#Partially deleted in new
chr7	21904149	21916897	chr7:21904149-21916897	0	-	21904149	21904149	8553170	6	110,126,168,72,378,144,	0,1356,2139,2418,3980,12604,
#Partially deleted in new
chr7	21908200	21945903	chr7:21908200-21945903	0	-	21908200	21945804	789624	3	307,138,123,	0,3416,37580,
#Partially deleted in new
chr7	21908366	21945878	chr7:21908366-21945878	0	-	21908366	21916816	789624	5	141,135,141,54,98,	0,3250,8387,31895,37414,
#Partially deleted in new
chr7	21908420	21944873	chr7:21908420-21944873	0	-	21908420	21916816	789624	4	87,138,141,197,	0,3196,8333,36256,
#Partially deleted in new
chr7	22118237	22193909	chr7:22118237-22193909	1	-	22122405	22193661	0	16	4284,55,65,88,51,91,179,123,98,150,79,31,98,145,79,543,	0,7366,12799,17800,18695,21787,26806,28659,32169,36217,38572,39617,42280,44159,48832,75129,
#Partially deleted in new
chr7	22118290	22356914	chr7:22118290-22356914	3	-	22122405	22310020	789624	26	4231,55,65,88,51,91,179,123,98,150,79,31,98,145,79,89,119,126,74,49,67,169,122,107,51,85,	0,7313,12746,17747,18642,21734,26753,28606,32116,36164,38519,39564,42227,44106,48779,75076,75624,101575,112555,148673,172884,190048,191678,197079,199696,238539,
#Partially deleted in new
chr7	22118308	22193735	chr7:22118308-22193735	1	-	22122405	22193661	0	14	4213,55,65,88,51,91,71,71,79,31,98,145,79,369,	0,7295,12728,17729,18624,21716,26735,36225,38501,39546,42209,44088,48761,75058,
#Partially deleted in new
chr7	22125231	22136072	chr7:22125231-22136072	0	-	22125231	22125231	8553170	4	190,55,65,35,	0,372,5805,10806,
#Deleted in new
chr7	22139756	22145266	chr7:22139756-22145266	0	-	22139756	22139756	8553170	2	359,223,	0,5287,
#Partially deleted in new
chr7	22154569	22194763	chr7:22154569-22194763	0	-	22154569	22167107	789624	9	35,79,31,98,145,79,89,119,194,	0,2240,3285,5948,7827,12500,38797,39345,40000,
#Partially deleted in new
chr7	22157863	22193744	chr7:22157863-22193744	0	-	22191562	22193661	789624	6	22,98,145,79,114,378,	0,2654,4533,9206,33665,35503,
#Partially deleted in new
chr7	22167069	22220238	chr7:22167069-22220238	0	-	22167069	22220045	789624	4	79,89,119,373,	0,26297,26845,52796,
#Partially deleted in new
chr7	22191438	22291241	chr7:22191438-22291241	0	-	22191438	22191438	8553170	7	204,89,119,126,74,49,67,	0,1928,2476,28427,39407,75525,99736,
#Partially deleted in new
chr7	22192176	22357144	chr7:22192176-22357144	1	-	22193689	22357060	789624	11	1601,119,126,74,49,67,169,122,107,51,315,	0,1738,27689,38669,74787,98998,116162,117792,123193,125810,164653,
#Deleted in new
chr7	22298593	22298706	chr7:22298593-22298706	7	+	22298593	22298593	16724991	1	113,	0,
#Partially deleted in new
chr7	22308446	22356225	chr7:22308446-22356225	0	-	22308446	22308446	8553170	5	61,122,107,51,248,	0,1522,6923,9540,47531,
#Deleted in new
chr7	22356309	22356910	chr7:22356309-22356910	0	-	22356309	22356309	8553170	2	302,81,	0,520,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	22419443	22500177	chr7:22419443-22500177	3	-	22419803	22494855	789624	5	393,165,456,115,64,	0,73121,73880,75328,80670,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	22438418	22500498	chr7:22438418-22500498	1	-	22438488	22494855	789624	5	337,165,513,115,385,	0,54146,54905,56353,61695,
#Partially deleted in new
chr7	22492391	22500201	chr7:22492391-22500201	0	-	22492391	22492391	8553170	4	338,513,115,88,	0,932,2380,7722,
#Partially deleted in new
chr7	22492564	22500205	chr7:22492564-22500205	0	-	22492564	22494855	789624	5	165,513,115,119,92,	0,759,2207,2797,7549,
#Partially deleted in new
chr7	22492676	22632925	chr7:22492676-22632925	0	-	22492676	22494855	789624	4	53,513,115,116,	0,647,2095,140133,
#Partially deleted in new
chr7	22510615	22511999	chr7:22510615-22511999	7	-	22510615	22510615	16724991	1	1384,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	22563336	22573996	chr7:22563336-22573996	3	+	22563336	22563336	789624	4	94,187,239,1912,	0,1629,8438,8748,
#Partially deleted in new
chr7	22571606	22661792	chr7:22571606-22661792	0	-	22571606	22571606	8553170	2	1154,128,	0,90058,
#Partially deleted in new
chr7	22571663	22727613	chr7:22571663-22727613	0	-	22571663	22571663	8553170	3	1097,113,46,	0,61146,155904,
#Deleted in new
chr7	22589704	22591622	chr7:22589704-22591622	3	+	22589704	22589704	8553170	2	97,460,	0,1458,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	22632715	22665502	chr7:22632715-22665502	0	-	22632715	22632715	8553170	8	207,206,168,148,91,120,91,158,	0,20230,20531,22486,30366,30629,31110,32629,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	22649959	22665533	chr7:22649959-22665533	0	-	22649959	22649959	789624	5	1194,206,168,835,189,	0,2986,3287,13122,15385,
#Deleted in new
chr7	22725394	22727620	chr7:22725394-22727620	3	-	22725394	22725394	789624	2	1311,53,	0,2173,
#Partially deleted in new
chr7	22725883	22732002	chr7:22725883-22732002	3	+	22727262	22731573	0	6	375,103,191,114,147,597,	0,1295,1560,2809,3630,5522,
#Partially deleted in new
chr7	22727146	22732000	chr7:22727146-22732000	1	+	22727262	22731573	0	5	135,191,114,147,595,	0,297,1546,2367,4259,
#Deleted in new
chr7	22727146	22729803	chr7:22727146-22729803	1	+	22728710	22729786	789624	3	135,114,290,	0,1546,2367,
#Deleted in new
chr7	22727146	22729647	chr7:22727146-22729647	0	+	22727262	22729647	789624	4	135,191,114,134,	0,297,1546,2367,
#Partially deleted in new
chr7	22727199	22731694	chr7:22727199-22731694	0	+	22727199	22727199	8553170	4	435,114,147,289,	0,1493,2314,4206,
#Partially deleted in new
chr7	22727213	22732002	chr7:22727213-22732002	1	+	22728710	22731573	789624	4	68,114,147,597,	0,1479,2300,4192,
#Partially deleted in new
chr7	22727223	22731729	chr7:22727223-22731729	1	+	22727262	22731573	789624	5	58,122,114,147,324,	0,289,1469,2290,4182,
#Deleted in new
chr7	22727239	22729815	chr7:22727239-22729815	1	+	22727262	22729786	789624	4	42,191,114,302,	0,204,1453,2274,
#Deleted in new
chr7	22728499	22729788	chr7:22728499-22729788	0	+	22728499	22728499	8553170	2	307,275,	0,1014,
#Partially deleted in new
chr7	22747674	22748804	chr7:22747674-22748804	7	-	22747674	22747674	16724991	1	1130,	0,
#Deleted in new
chr7	22773645	22773993	chr7:22773645-22773993	7	-	22773645	22773645	16724991	1	348,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	22812627	22822849	chr7:22812627-22822849	0	-	22812627	22812627	8553170	2	558,173,	0,10049,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	22812631	22822851	chr7:22812631-22822851	3	-	22813169	22822779	789624	3	554,49,175,	0,5368,10045,
#Partially deleted in new
chr7	22812970	22822344	chr7:22812970-22822344	1	-	22813169	22822244	789624	3	215,49,191,	0,5029,9183,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	22812970	22818335	chr7:22812970-22818335	0	-	22812970	22812970	8553170	2	215,336,	0,5029,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	22812972	22822791	chr7:22812972-22822791	1	-	22813096	22822779	789624	4	213,137,49,115,	0,4439,5027,9704,
#Partially deleted in new
chr7	22817339	22822852	chr7:22817339-22822852	1	-	22817339	22822779	789624	3	16,49,176,	0,660,5337,
#Partially deleted in new
chr7	22817662	22822810	chr7:22817662-22822810	0	-	22817662	22817662	8553170	2	386,134,	0,5014,
#Partially deleted in new
chr7	22854177	22859487	chr7:22854177-22859487	3	+	22854177	22854177	8553170	4	103,35,44,917,	0,2344,2795,4393,
#Deleted in new
chr7	22856085	22857075	chr7:22856085-22857075	0	+	22856085	22856085	8553170	2	471,103,	0,887,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	22856527	22861579	chr7:22856527-22861579	1	+	22856527	22856527	8553170	3	29,44,1033,	0,445,4019,
#Deleted in new
chr7	22856612	22856686	chr7:22856612-22856686	3	+	22856612	22856612	789624	1	74,	0,
#Partially deleted in new
chr7	22863873	22881350	chr7:22863873-22881350	7	-	22863873	22863873	16724991	10	120,205,103,318,226,87,142,159,64,43,	0,483,3972,5520,8649,11226,11712,13149,15154,17434,
#Deleted in new
chr7	22881892	22882390	chr7:22881892-22882390	7	+	22881892	22881892	16724991	1	498,	0,
#Partially deleted in new
chr7	22889370	22941190	chr7:22889370-22941190	0	-	22889370	22889370	8553170	4	323,215,112,25,	0,1564,51601,51795,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	22934210	23014129	chr7:22934210-23014129	3	-	22945588	22991111	0	11	11953,160,88,117,96,116,81,180,102,79,205,	0,26045,27024,30204,41999,42482,43130,44058,49733,56850,79714,
#Partially deleted in new
chr7	22941268	23014130	chr7:22941268-23014130	0	-	22946978	23014130	789624	11	4895,296,160,88,117,96,116,81,180,102,206,	0,5683,18987,19966,23146,34941,35424,36072,37000,42675,72656,
#Partially deleted in new
chr7	22944508	23014084	chr7:22944508-23014084	1	-	22946978	22991111	0	12	1655,296,160,88,117,96,116,81,180,102,79,160,	0,2443,15747,16726,19906,31701,32184,32832,33760,39435,46552,69416,
#Partially deleted in new
chr7	22945982	22961316	chr7:22945982-22961316	0	-	22945982	22945982	8553170	4	181,215,160,82,	0,1050,14273,15252,
#Partially deleted in new
chr7	22976768	23014088	chr7:22976768-23014088	0	-	22976768	22976768	8553170	5	40,81,180,79,164,	0,572,1500,14292,37156,
#Partially deleted in new
chr7	22978163	23014074	chr7:22978163-23014074	1	-	22978256	22991111	789624	4	285,102,79,150,	0,5780,12897,35761,
#Partially deleted in new
chr7	22983749	23014091	chr7:22983749-23014091	0	-	22983749	22983749	8553170	3	296,79,167,	0,7311,30175,
#Partially deleted in new
chr7	22983993	23014130	chr7:22983993-23014130	0	-	22983993	22983993	8553170	4	52,188,79,206,	0,1554,7067,29931,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	23101227	23105703	chr7:23101227-23105703	3	-	23101227	23101227	789624	3	2351,68,145,	0,3022,4331,
#Partially deleted in new
chr7	23105757	23143901	chr7:23105757-23143901	0	+	23105757	23105757	8553170	3	389,176,51,	0,35011,38093,
#Partially deleted in new
chr7	23105757	23175302	chr7:23105757-23175302	0	+	23106026	23117836	789624	12	389,131,103,94,125,176,175,143,241,202,98,1288,	0,12076,18019,18930,19290,35011,38093,46309,59940,62078,67190,68257,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	23105783	23177914	chr7:23105783-23177914	3	+	23106026	23174298	0	11	363,103,94,125,176,175,143,241,202,98,3900,	0,17993,18904,19264,34985,38067,46283,59914,62052,67164,68231,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	23105784	23126045	chr7:23105784-23126045	1	+	23106026	23125819	0	5	362,103,94,125,285,	0,17992,18903,19263,19976,
#Partially deleted in new
chr7	23105789	23140784	chr7:23105789-23140784	0	+	23105789	23105789	8553170	4	357,94,125,16,	0,18898,19258,34979,
#Partially deleted in new
chr7	23106116	23125202	chr7:23106116-23125202	0	+	23106116	23106116	8553170	5	30,131,103,94,155,	0,11717,17660,18571,18931,
#Partially deleted in new
chr7	23106294	23175388	chr7:23106294-23175388	1	+	23123800	23174298	0	11	500,103,94,125,176,175,143,241,202,98,1374,	0,17482,18393,18753,34474,37556,45772,59403,61541,66653,67720,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	23106297	23126043	chr7:23106297-23126043	1	+	23117910	23125819	0	6	497,131,103,94,125,283,	0,11536,17479,18390,18750,19463,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	23106655	23125887	chr7:23106655-23125887	0	+	23106655	23106655	8553170	5	139,103,94,125,127,	0,17121,18032,18392,19105,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	23124979	23126049	chr7:23124979-23126049	0	+	23124979	23124979	8553170	2	193,289,	0,781,
#Deleted in new
chr7	23129177	23129841	chr7:23129177-23129841	7	+	23129177	23129177	16724991	1	664,	0,
#Partially deleted in new
chr7	23143928	23156168	chr7:23143928-23156168	0	+	23143928	23156032	789624	3	97,143,178,	0,8138,12062,
#Deleted in new
chr7	23165874	23168102	chr7:23165874-23168102	0	+	23165874	23165874	8553170	2	64,267,	0,1961,
#Deleted in new
chr7	23172788	23174192	chr7:23172788-23174192	0	+	23172788	23172788	8553170	2	257,178,	0,1226,
#Partially deleted in new
chr7	23181826	23201009	chr7:23181826-23201009	3	+	23182085	23200745	789624	7	380,229,95,77,87,85,842,	0,3243,5225,14012,14853,17631,18341,
#Partially deleted in new
chr7	23181840	23200955	chr7:23181840-23200955	0	+	23181840	23181840	8553170	7	649,229,95,77,87,85,788,	0,3229,5211,13998,14839,17617,18327,
#Partially deleted in new
chr7	23182023	23201006	chr7:23182023-23201006	0	+	23182085	23199465	789624	8	183,229,95,77,87,58,85,839,	0,3046,5028,13815,14656,15149,17434,18144,
#Partially deleted in new
chr7	23182037	23188219	chr7:23182037-23188219	1	+	23182085	23188055	789624	4	169,229,95,187,	0,3032,5014,5995,
#Partially deleted in new
chr7	23182037	23187392	chr7:23182037-23187392	0	+	23182037	23182037	8553170	3	169,229,341,	0,3032,5014,
#Partially deleted in new
chr7	23182048	23196442	chr7:23182048-23196442	0	+	23182048	23182048	8553170	5	158,229,95,77,64,	0,3021,5003,13790,14330,
#Partially deleted in new
chr7	23182063	23200705	chr7:23182063-23200705	0	+	23182085	23200705	789624	8	143,229,95,77,87,75,85,538,	0,3006,4988,13775,14616,15109,17394,18104,
#Partially deleted in new
chr7	23182065	23200967	chr7:23182065-23200967	0	+	23182085	23187065	789624	6	141,95,77,87,85,800,	0,4986,13773,14614,17392,18102,
#Partially deleted in new
chr7	23187072	23197284	chr7:23187072-23197284	0	+	23187072	23187072	8553170	4	74,77,87,112,	0,8766,9607,10100,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	23194402	23201011	chr7:23194402-23201011	0	+	23194402	23194402	8553170	4	1513,87,85,844,	0,2277,5055,5765,
#Deleted in new
chr7	23199423	23200824	chr7:23199423-23200824	0	+	23199423	23199423	8553170	2	119,657,	0,744,
#Partially deleted in new
chr7	23200130	23206059	chr7:23200130-23206059	3	-	23200130	23200130	8553170	2	603,345,	0,5584,
#Deleted in new
chr7	23205786	23208045	chr7:23205786-23208045	3	+	23205786	23205786	8553170	1	2259,	0,
#Partially deleted in new
chr7	23235966	23260053	chr7:23235966-23260053	0	+	23235966	23235966	8553170	6	157,91,153,144,174,74,	0,701,17340,18202,20925,24013,
#Partially deleted in new
chr7	23236007	23257043	chr7:23236007-23257043	0	+	23236007	23236007	8553170	5	116,156,153,144,152,	0,660,17299,18161,20884,
#Partially deleted in new
chr7	23246562	23275108	chr7:23246562-23275108	1	+	23246857	23274224	789624	11	365,153,144,174,159,318,99,103,209,94,1044,	0,6744,7606,10329,13417,13893,19954,21323,23404,26958,27502,
#Partially deleted in new
chr7	23246696	23275107	chr7:23246696-23275107	1	+	23246857	23274224	789624	11	231,153,144,174,159,318,135,103,209,94,1043,	0,6610,7472,10195,13283,13759,19784,21189,23270,26824,27368,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	23246708	23258048	chr7:23246708-23258048	1	+	23246857	23257145	789624	4	219,153,144,1157,	0,6598,7460,10183,
#Partially deleted in new
chr7	23246765	23253367	chr7:23246765-23253367	0	+	23246765	23246765	8553170	4	162,253,101,61,	0,975,3996,6541,
#Partially deleted in new
chr7	23246767	23256910	chr7:23246767-23256910	0	+	23246767	23246767	8553170	5	160,101,153,144,19,	0,3994,6539,7401,10124,
#Deleted in new
chr7	23246773	23247367	chr7:23246773-23247367	0	+	23246773	23246773	8553170	2	154,359,	0,235,
#Deleted in new
chr7	23250712	23254312	chr7:23250712-23254312	0	+	23250712	23250712	8553170	3	150,153,144,	0,2594,3456,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	23266139	23270175	chr7:23266139-23270175	0	+	23266139	23266139	8553170	3	476,103,209,	0,1746,3827,
#Partially deleted in new
chr7	23270042	23273925	chr7:23270042-23273925	0	+	23270042	23270042	8553170	2	133,405,	0,3478,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	23273080	23274252	chr7:23273080-23274252	0	+	23273080	23273080	8553170	3	96,94,188,	0,440,984,
#Deleted in new
chr7	23273268	23274729	chr7:23273268-23274729	0	+	23273268	23273268	8553170	3	103,94,665,	0,252,796,
#Deleted in new
chr7	23273292	23274550	chr7:23273292-23274550	0	+	23273292	23273292	8553170	2	322,486,	0,772,
#Partially deleted in new
chr7	23298738	23300924	chr7:23298738-23300924	0	+	23298738	23298738	8553170	2	411,86,	0,2100,
#Partially deleted in new
chr7	23299199	23311729	chr7:23299199-23311729	3	+	23299352	23309543	0	4	409,179,82,2374,	0,1639,8668,10156,
#Partially deleted in new
chr7	23299338	23307990	chr7:23299338-23307990	0	+	23299338	23299338	8553170	3	270,179,123,	0,1500,8529,
#Partially deleted in new
chr7	23299340	23301195	chr7:23299340-23301195	0	+	23299340	23299340	8553170	2	268,357,	0,1498,
#Partially deleted in new
chr7	23307690	23309575	chr7:23307690-23309575	0	+	23307690	23307690	8553170	2	259,220,	0,1665,
#Partially deleted in new
chr7	23310208	23470467	chr7:23310208-23470467	3	-	23312361	23470110	0	15	2252,114,132,75,117,126,136,123,135,282,64,52,49,61,532,	0,2526,3313,7430,8929,31855,33509,35731,37391,41096,51325,51481,108567,158273,159727,
#Partially deleted in new
chr7	23311126	23347704	chr7:23311126-23347704	1	-	23312361	23342123	0	8	1334,114,132,75,117,126,123,105,	0,1608,2395,6512,8011,30937,34813,36473,
#Partially deleted in new
chr7	23311240	23470455	chr7:23311240-23470455	0	-	23361587	23470110	789624	12	1220,114,132,75,126,136,123,135,282,64,61,520,	0,1494,2281,6398,30823,32477,34699,36359,40064,50293,157241,158695,
#Partially deleted in new
chr7	23312372	23317833	chr7:23312372-23317833	0	-	23312372	23312372	8553170	4	88,114,132,195,	0,362,1149,5266,
#Partially deleted in new
chr7	23317692	23347812	chr7:23317692-23347812	0	-	23317692	23317692	8553170	5	21,117,126,123,213,	0,1445,24371,28247,29907,
#Partially deleted in new
chr7	23319137	23347803	chr7:23319137-23347803	0	-	23319137	23319137	8553170	5	117,126,136,123,155,	0,22926,24580,26802,28511,
#Partially deleted in new
chr7	23342065	23347812	chr7:23342065-23347812	0	-	23342065	23342065	8553170	4	124,136,123,213,	0,1652,3874,5534,
#Partially deleted in new
chr7	23342095	23346161	chr7:23342095-23346161	0	-	23342095	23342095	8553170	3	94,136,222,	0,1622,3844,
#Partially deleted in new
chr7	23347630	23467926	chr7:23347630-23467926	0	-	23347630	23347630	8553170	6	104,282,64,52,49,155,	0,3674,13903,14059,71145,120141,
#Partially deleted in new
chr7	23347662	23394677	chr7:23347662-23394677	0	-	23347662	23347662	8553170	5	72,282,64,52,94,	0,3642,13871,14027,46921,
#Partially deleted in new
chr7	23347698	23431296	chr7:23347698-23431296	0	-	23347698	23347698	8553170	5	36,282,64,49,128,	0,3606,13835,71077,83470,
#Partially deleted in new
chr7	23347723	23431298	chr7:23347723-23431298	0	-	23347723	23347723	8553170	6	11,282,64,52,49,130,	0,3581,13810,13966,71052,83445,
#Partially deleted in new
chr7	23351386	23469502	chr7:23351386-23469502	0	-	23351386	23351386	8553170	8	200,64,52,15,92,49,61,267,	0,10147,10303,51184,53632,67389,117095,117849,
#Partially deleted in new
chr7	23351443	23431303	chr7:23351443-23431303	0	-	23351443	23351443	8553170	6	143,64,52,91,49,135,	0,10090,10246,64685,67332,79725,
#Partially deleted in new
chr7	23351479	23431303	chr7:23351479-23431303	0	-	23351479	23351479	8553170	6	107,64,52,149,49,135,	0,10054,10210,11047,67296,79689,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	23351505	23402710	chr7:23351505-23402710	0	-	23351505	23351505	8553170	4	81,64,52,466,	0,10028,10184,50739,
#Partially deleted in new
chr7	23361340	23470016	chr7:23361340-23470016	0	-	23361340	23361340	8553170	5	257,52,49,61,81,	0,349,57435,107141,108595,
#Deleted in new
chr7	23365617	23365976	chr7:23365617-23365976	7	+	23365617	23365617	16724991	1	359,	0,
#Deleted in new
chr7	23396445	23396516	chr7:23396445-23396516	3	+	23396445	23396445	5263520	1	71,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	23413243	23470360	chr7:23413243-23470360	0	-	23413243	23413243	8553170	5	2322,91,49,61,425,	0,2885,5532,55238,56692,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	23450657	23450722	chr7:23450657-23450722	3	+	23450657	23450657	8553170	1	65,	0,
#Partially deleted in new
chr7	23480752	23480959	chr7:23480752-23480959	7	+	23480752	23480752	16724991	1	207,	0,
#Deleted in new
chr7	23490472	23491364	chr7:23490472-23491364	7	+	23490472	23490472	16724991	1	892,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	23491791	23491893	chr7:23491791-23491893	3	-	23491791	23491791	8553170	1	102,	0,
#Partially deleted in new
chr7	23504779	23532041	chr7:23504779-23532041	3	-	23505558	23531824	789624	8	790,68,129,116,189,166,134,253,	0,966,1358,2640,8114,11583,16927,27009,
#Partially deleted in new
chr7	23504783	23532041	chr7:23504783-23532041	1	-	23505558	23516395	789624	10	786,65,129,116,189,166,134,301,90,253,	0,962,1354,2636,8110,11579,16923,17348,26397,27005,
#Partially deleted in new
chr7	23504783	23532041	chr7:23504783-23532041	1	-	23505558	23516395	789624	9	786,68,129,116,189,166,134,301,253,	0,962,1354,2636,8110,11579,16923,17348,27005,
#Partially deleted in new
chr7	23504783	23532041	chr7:23504783-23532041	1	-	23505558	23516395	789624	9	786,68,129,116,189,166,134,90,253,	0,962,1354,2636,8110,11579,16923,26397,27005,
#Partially deleted in new
chr7	23505248	23506206	chr7:23505248-23506206	0	-	23505248	23505248	8553170	3	321,65,69,	0,497,889,
#Partially deleted in new
chr7	23505315	23505885	chr7:23505315-23505885	0	-	23505315	23505315	8553170	2	254,140,	0,430,
#Partially deleted in new
chr7	23505319	23506480	chr7:23505319-23506480	0	-	23505319	23505319	8553170	3	250,68,343,	0,426,818,
#Partially deleted in new
chr7	23505467	23506208	chr7:23505467-23506208	0	-	23505467	23505467	8553170	2	346,71,	0,670,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	23507156	23531981	chr7:23507156-23531981	0	-	23507156	23507156	8553170	5	379,189,166,726,193,	0,5737,9206,14550,24632,
#Partially deleted in new
chr7	23507420	23531680	chr7:23507420-23531680	0	-	23507420	23507420	8553170	5	115,189,166,134,264,	0,5473,8942,14286,23996,
#Partially deleted in new
chr7	23513024	23531980	chr7:23513024-23531980	0	-	23513024	23513024	8553170	5	58,166,134,312,192,	0,3338,8682,9096,18764,
#Partially deleted in new
chr7	23516394	23532023	chr7:23516394-23532023	0	-	23521763	23531824	789624	4	134,134,79,235,	0,5312,5959,15394,
#Deleted in new
chr7	23562458	23564261	chr7:23562458-23564261	7	-	23562458	23562458	16724991	1	1803,	0,
#Deleted in new
chr7	23585061	23586355	chr7:23585061-23586355	7	-	23585061	23585061	16724991	1	1294,	0,
#Partially deleted in new
chr7	23597378	23644708	chr7:23597378-23644708	3	+	23611315	23643115	789624	4	227,85,383,1778,	0,588,13792,45552,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	23597415	23602220	chr7:23597415-23602220	0	+	23597415	23597415	8553170	3	190,85,350,	0,551,4455,
#Partially deleted in new
chr7	23597441	23644707	chr7:23597441-23644707	1	+	23611315	23643115	789624	3	164,383,1777,	0,13729,45489,
#Partially deleted in new
chr7	23597514	23643024	chr7:23597514-23643024	0	+	23611315	23643024	789624	5	91,85,194,383,94,	0,452,6571,13656,45416,
#Partially deleted in new
chr7	23597722	23611508	chr7:23597722-23611508	0	+	23597722	23597722	8553170	2	329,338,	0,13448,
#Partially deleted in new
chr7	23597837	23642936	chr7:23597837-23642936	0	+	23597837	23597837	8553170	4	214,194,383,6,	0,6248,13333,45093,
#Partially deleted in new
chr7	23598160	23643237	chr7:23598160-23643237	1	+	23611315	23643115	789624	4	62,138,383,307,	0,5981,13010,44770,
#Partially deleted in new
chr7	23598291	23611549	chr7:23598291-23611549	0	+	23598291	23598291	8553170	3	227,194,379,	0,5794,12879,
#Partially deleted in new
chr7	23619332	23622826	chr7:23619332-23622826	7	+	23619332	23619332	16724991	2	222,349,	0,3145,
#Partially deleted in new
chr7	23655681	23655861	chr7:23655681-23655861	7	+	23655681	23655681	16724991	1	180,	0,
#Partially deleted in new
chr7	23680129	23702650	chr7:23680129-23702650	3	+	23680218	23702164	789624	7	154,174,191,207,108,83,555,	0,4369,9139,11260,18062,20656,21966,
#Partially deleted in new
chr7	23680129	23702174	chr7:23680129-23702174	1	+	23680218	23702164	789624	6	154,174,191,207,83,79,	0,4369,9139,11260,20656,21966,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	23680166	23702643	chr7:23680166-23702643	0	+	23680218	23686394	789624	8	117,174,2699,191,207,71,83,548,	0,4332,6122,9102,11223,12016,20619,21929,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	23680178	23702650	chr7:23680178-23702650	0	+	23680178	23680178	8553170	8	105,174,191,207,2731,108,83,555,	0,4320,9090,11211,12004,18013,20607,21917,
#Partially deleted in new
chr7	23680183	23702167	chr7:23680183-23702167	1	+	23680218	23702164	789624	6	100,191,207,108,83,72,	0,9085,11206,18008,20602,21912,
#Partially deleted in new
chr7	23680183	23702650	chr7:23680183-23702650	1	+	23680218	23702164	789624	5	100,191,207,83,555,	0,9085,11206,20602,21912,
#Deleted in new
chr7	23680194	23680786	chr7:23680194-23680786	3	-	23680194	23680194	8553170	2	75,68,	0,524,
#Partially deleted in new
chr7	23700792	23703249	chr7:23700792-23703249	0	+	23700792	23700792	8553170	3	76,126,556,	0,1303,1901,
#Partially deleted in new
chr7	23710166	23832513	chr7:23710166-23832513	3	+	23710285	23832366	789624	24	169,47,53,99,75,159,359,175,116,160,123,180,117,120,132,102,81,126,126,87,150,123,69,378,	0,1932,2067,7314,17074,18924,25371,26737,42550,44148,52634,58828,59473,60838,61980,71252,73416,75311,76341,76671,77813,80657,104977,121969,
#Partially deleted in new
chr7	23710202	23735607	chr7:23710202-23735607	0	+	23712117	23735607	789624	7	133,47,53,36,75,159,70,	0,1896,2031,7341,17038,18888,25335,
#Partially deleted in new
chr7	23710254	23735628	chr7:23710254-23735628	0	+	23712117	23735601	789624	7	81,39,53,99,75,159,91,	0,1852,1979,7226,16986,18836,25283,
#Partially deleted in new
chr7	23710259	23781520	chr7:23710259-23781520	0	+	23710259	23710259	8553170	15	76,47,53,99,75,159,359,175,116,160,123,180,117,1274,102,	0,1839,1974,7221,16981,18831,25278,26644,42457,44055,52541,58735,59380,60745,71159,
#Partially deleted in new
chr7	23710274	23832449	chr7:23710274-23832449	1	+	23710285	23832366	789624	23	61,47,53,99,75,159,359,175,116,160,123,180,117,120,132,102,81,126,126,87,150,123,314,	0,1824,1959,7206,16966,18816,25263,26629,42442,44040,52526,58720,59365,60730,61872,71144,73308,75203,76233,76563,77705,80549,121861,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	23710311	23727610	chr7:23710311-23727610	0	+	23710311	23710311	8553170	5	24,47,53,99,370,	0,1787,1922,7169,16929,
#Partially deleted in new
chr7	23710325	23832507	chr7:23710325-23832507	1	+	23712117	23832366	789624	24	445,47,53,99,75,159,359,175,116,160,123,180,117,120,132,102,81,126,126,87,150,123,69,372,	0,1773,1908,7155,16915,18765,25212,26578,42391,43989,52475,58669,59314,60679,61821,71093,73257,75152,76182,76512,77654,80498,104818,121810,
#Partially deleted in new
chr7	23710326	23717527	chr7:23710326-23717527	0	+	23712117	23717527	789624	4	416,47,53,47,	0,1772,1907,7154,
#Partially deleted in new
chr7	23710377	23729116	chr7:23710377-23729116	0	+	23712117	23729116	789624	6	361,47,53,99,75,26,	0,1721,1856,7103,16863,18713,
#Deleted in new
chr7	23721310	23721782	chr7:23721310-23721782	7	-	23721310	23721310	16724991	1	472,	0,
#Deleted in new
chr7	23811143	23811660	chr7:23811143-23811660	7	-	23811143	23811143	16724991	1	517,	0,
#Partially deleted in new
chr7	23891703	23897335	chr7:23891703-23897335	3	-	23891703	23891703	8553170	2	424,75,	0,5557,
#Duplicated in new
chr7	24132704	24132837	chr7:24132704-24132837	7	+	24132704	24132704	16724991	1	133,	0,
#Partially deleted in new
chr7	24196661	24255719	chr7:24196661-24255719	3	-	24196661	24196661	8553170	2	368,159,	0,58899,
#Partially deleted in new
chr7	24284162	24291865	chr7:24284162-24291865	3	+	24285240	24291687	0	4	113,188,81,203,	0,1078,5336,7500,
#Partially deleted in new
chr7	24284187	24291808	chr7:24284187-24291808	1	+	24285240	24291687	0	5	88,202,188,81,146,	0,687,1053,5311,7475,
#Partially deleted in new
chr7	24285106	24291824	chr7:24285106-24291824	1	+	24285240	24291687	0	3	322,81,162,	0,4392,6556,
#Partially deleted in new
chr7	24573267	24650712	chr7:24573267-24650712	0	+	24623667	24650712	789624	5	326,122,153,153,228,	0,50395,68448,76344,77217,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	24573345	24694193	chr7:24573345-24694193	3	+	24623667	24687614	789624	12	248,119,153,153,228,132,100,69,162,203,129,6756,	0,50320,68370,76266,77139,90244,92242,92675,95153,105785,107046,114092,
#Partially deleted in new
chr7	24573414	24687632	chr7:24573414-24687632	1	+	24649677	24687614	789624	11	179,153,153,228,132,100,69,162,203,129,195,	0,68301,76197,77070,90175,92173,92606,95084,105716,106977,114023,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	24573465	24689540	chr7:24573465-24689540	1	+	24623667	24687614	789624	13	128,169,119,153,153,228,132,100,69,162,203,129,2103,	0,46586,50200,68250,76146,77019,90124,92122,92555,95033,105665,106926,113972,
#Partially deleted in new
chr7	24574012	24666060	chr7:24574012-24666060	0	+	24623667	24666060	789624	8	266,119,153,153,228,132,100,40,	0,49653,67703,75599,76472,89577,91575,92008,
#Deleted in new
chr7	24589114	24589407	chr7:24589114-24589407	7	-	24589114	24589114	16724991	1	293,	0,
#Partially deleted in new
chr7	24597119	24641812	chr7:24597119-24641812	0	+	24623667	24624070	789624	5	72,169,119,95,97,	0,22932,26546,26942,44596,
#Deleted in new
chr7	24623667	24624070	chr7:24623667-24624070	1	+	24623667	24624070	789624	2	117,9,	0,394,
#Deleted in new
chr7	24663473	24666046	chr7:24663473-24666046	0	+	24663473	24663473	8553170	3	248,100,26,	0,2114,2547,
#Partially deleted in new
chr7	24665682	24687876	chr7:24665682-24687876	0	+	24665682	24668499	789624	7	5,69,118,162,203,129,439,	0,338,1182,2816,13448,14709,21755,
#Deleted in new
chr7	24674308	24674612	chr7:24674308-24674612	7	-	24674308	24674308	16724991	1	304,	0,
#Partially deleted in new
chr7	24698350	24758113	chr7:24698350-24758113	3	-	24699025	24749774	789624	10	909,74,193,128,165,121,172,193,230,407,	0,4409,7833,9776,11873,18903,20696,46211,51213,59356,
#Partially deleted in new
chr7	24698354	24757464	chr7:24698354-24757464	1	-	24699025	24749774	789624	10	905,74,193,128,165,121,172,193,230,69,	0,4405,7829,9772,11869,18899,20692,46207,51209,59041,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	24698355	24706037	chr7:24698355-24706037	0	-	24698355	24698355	8553170	2	904,3278,	0,4404,
#Partially deleted in new
chr7	24698388	24757475	chr7:24698388-24757475	1	-	24699025	24719130	789624	9	871,74,193,128,165,121,172,193,80,	0,4371,7795,9738,11835,18865,20658,46173,59007,
#Partially deleted in new
chr7	24698490	24757940	chr7:24698490-24757940	1	-	24699025	24719130	789624	9	769,74,193,128,165,121,172,193,234,	0,4269,7693,9636,11733,18763,20556,46071,59216,
#Partially deleted in new
chr7	24698994	24757543	chr7:24698994-24757543	1	-	24699025	24749774	789624	10	265,74,193,128,165,121,172,193,230,148,	0,3765,7189,9132,11229,18259,20052,45567,50569,58401,
#Partially deleted in new
chr7	24702426	24706226	chr7:24702426-24706226	0	-	24702708	24706226	789624	2	407,43,	0,3757,
#Partially deleted in new
chr7	24707278	24717316	chr7:24707278-24717316	0	-	24707311	24717316	789624	4	144,128,165,63,	0,848,2945,9975,
#Partially deleted in new
chr7	24707278	24719096	chr7:24707278-24719096	0	-	24707311	24719096	789624	5	147,128,165,121,50,	0,848,2945,9975,11768,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	24707312	24757731	chr7:24707312-24757731	1	-	24708045	24749774	789624	7	942,165,121,172,193,230,25,	0,2911,9941,11734,37249,42251,50394,
#Deleted in new
chr7	24708035	24710587	chr7:24708035-24710587	0	-	24708035	24708035	8553170	2	219,364,	0,2188,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	24708251	24724784	chr7:24708251-24724784	0	-	24708251	24708251	8553170	5	3,165,121,172,99,	0,1972,9002,10795,16434,
#Partially deleted in new
chr7	24710224	24744734	chr7:24710224-24744734	0	-	24710224	24710224	8553170	5	164,83,121,172,173,	0,5266,7029,8822,34337,
#Partially deleted in new
chr7	24716468	24749793	chr7:24716468-24749793	0	-	24716468	24716468	8553170	4	906,172,193,230,	0,2578,28093,33095,
#Partially deleted in new
chr7	24744010	24749794	chr7:24744010-24749794	0	-	24744010	24744010	8553170	2	744,231,	0,5553,
#Partially deleted in new
chr7	24796538	24980188	chr7:24796538-24980188	3	-	24800182	24892472	789624	23	3741,123,127,145,145,79,64,138,251,94,135,108,131,157,93,104,124,168,114,54,117,245,303,	0,7776,10237,13268,18520,20071,23636,34229,37947,44151,45740,52530,55965,65074,66661,66957,68803,69531,74193,75203,75414,95838,183347,
#Partially deleted in new
chr7	24799765	24892575	chr7:24799765-24892575	0	-	24834302	24892472	789624	21	514,123,127,145,145,79,64,138,650,94,135,108,131,157,104,124,168,114,54,117,199,	0,4549,7010,10041,15293,16844,20409,31002,34321,40924,42513,49303,52738,61847,63730,65576,66304,70966,71976,72187,92611,
#Partially deleted in new
chr7	24799924	24892612	chr7:24799924-24892612	1	-	24800182	24892472	789624	21	355,123,127,145,145,79,64,138,251,94,135,108,131,157,104,124,168,114,54,117,236,	0,4390,6851,9882,15134,16685,20250,30843,34561,40765,42354,49144,52579,61688,63571,65417,66145,70807,71817,72028,92452,
#Partially deleted in new
chr7	24800004	24892575	chr7:24800004-24892575	0	-	24834302	24892472	789624	22	275,123,127,145,145,79,64,138,650,94,135,108,131,157,93,104,124,168,114,54,117,199,	0,4310,6771,9802,15054,16605,20170,30763,34082,40685,42274,49064,52499,61608,63195,63491,65337,66065,70727,71737,71948,92372,
#Partially deleted in new
chr7	24800021	24892575	chr7:24800021-24892575	0	-	24834302	24892472	789624	21	258,123,127,145,145,79,64,138,650,94,135,131,157,93,104,124,168,114,54,117,199,	0,4293,6754,9785,15037,16588,20153,30746,34065,40668,42257,52482,61591,63178,63474,65320,66048,70710,71720,71931,92355,
#Partially deleted in new
chr7	24800028	24815093	chr7:24800028-24815093	0	-	24800028	24800028	8553170	4	251,123,145,35,	0,4286,9778,15030,
#Partially deleted in new
chr7	24800059	24892575	chr7:24800059-24892575	0	-	24834302	24892472	789624	20	220,123,127,145,145,79,64,138,650,94,135,131,157,104,124,168,114,54,117,199,	0,4255,6716,9747,14999,16550,20115,30708,34027,40630,42219,52444,61553,63436,65282,66010,70672,71682,71893,92317,
#Partially deleted in new
chr7	24800134	24892575	chr7:24800134-24892575	1	-	24800182	24892472	789624	21	145,123,127,145,145,79,64,138,251,94,135,131,157,93,104,124,168,114,54,117,199,	0,4180,6641,9672,14924,16475,20040,30633,34351,40555,42144,52369,61478,63065,63361,65207,65935,70597,71607,71818,92242,
#Partially deleted in new
chr7	24800134	24892575	chr7:24800134-24892575	1	-	24800182	24892472	789624	20	145,123,127,145,145,79,64,138,251,94,135,131,157,104,124,168,114,54,117,199,	0,4180,6641,9672,14924,16475,20040,30633,34351,40555,42144,52369,61478,63361,65207,65935,70597,71607,71818,92242,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	24806819	24810359	chr7:24806819-24810359	0	-	24806819	24806819	8553170	2	83,553,	0,2987,
#Partially deleted in new
chr7	24842375	24849336	chr7:24842375-24849336	0	-	24842375	24842375	8553170	2	38,268,	0,6693,
#Partially deleted in new
chr7	24870774	24918093	chr7:24870774-24918093	0	-	24870774	24892472	789624	5	71,54,117,245,47,	0,967,1178,21602,47272,
#Partially deleted in new
chr7	24871741	24918080	chr7:24871741-24918080	0	-	24871741	24892472	789624	4	54,117,245,124,	0,211,20635,46215,
#Partially deleted in new
chr7	24871982	24981634	chr7:24871982-24981634	0	-	24871982	24892472	789624	3	87,245,236,	0,20394,109416,
#Deleted in new
chr7	24906134	24906594	chr7:24906134-24906594	7	-	24906134	24906134	16724991	1	460,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	25120090	25125361	chr7:25120090-25125361	3	-	25123700	25124119	0	3	3759,177,162,	0,3860,5109,
#Deleted in new
chr7	25123306	25125249	chr7:25123306-25125249	1	-	25123700	25124119	0	3	543,177,254,	0,644,1689,
#Deleted in new
chr7	25123443	25125260	chr7:25123443-25125260	1	-	25123700	25124119	0	4	406,177,155,61,	0,507,1246,1756,
#Deleted in new
chr7	25123715	25125260	chr7:25123715-25125260	0	-	25123715	25124119	789624	4	134,177,126,61,	0,235,974,1484,
#Partially deleted in new
chr7	25134696	25180354	chr7:25134696-25180354	3	-	25135971	25179308	789624	10	2097,92,175,89,182,30,72,177,158,285,	0,7544,7943,16899,20314,23804,26492,33592,44478,45373,
#Partially deleted in new
chr7	25135734	25180300	chr7:25135734-25180300	1	-	25135971	25179308	789624	10	1059,92,175,89,182,30,72,177,158,639,	0,6506,6905,15861,19276,22766,25454,32554,43440,43927,
#Partially deleted in new
chr7	25155144	25179402	chr7:25155144-25179402	0	-	25155144	25179308	789624	5	48,30,72,177,228,	0,3356,6044,13144,24030,
#Partially deleted in new
chr7	25161224	25180356	chr7:25161224-25180356	0	-	25161224	25179308	789624	4	36,177,158,386,	0,7064,17950,18746,
#Partially deleted in new
chr7	25168321	25180048	chr7:25168321-25180048	0	-	25168321	25179308	789624	4	144,158,139,78,	0,10853,11340,11649,
#Partially deleted in new
chr7	25185622	25188724	chr7:25185622-25188724	7	+	25185622	25185622	16724991	3	132,91,64,	0,1328,3038,
#Deleted in new
chr7	25212169	25212965	chr7:25212169-25212965	7	-	25212169	25212169	16724991	1	796,	0,
#Deleted in new
chr7	25224569	25228486	chr7:25224569-25228486	3	-	25225121	25228439	789624	3	604,401,185,	0,2056,3732,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	25254964	25257129	chr7:25254964-25257129	3	-	25254964	25254964	8553170	2	1584,208,	0,1957,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	25264655	25264882	chr7:25264655-25264882	3	+	25264655	25264655	8553170	1	227,	0,
#Deleted in new
chr7	25265923	25266290	chr7:25265923-25266290	7	-	25265923	25265923	16724991	1	367,	0,
#Partially deleted in new
chr7	25321301	25326815	chr7:25321301-25326815	3	-	25321301	25321301	8553170	3	215,112,35,	0,3993,5479,
#Deleted in new
chr7	25358239	25359908	chr7:25358239-25359908	3	-	25358239	25358239	8553170	1	1669,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	25431979	25500443	chr7:25431979-25500443	3	+	25431979	25431979	8553170	3	66,133,1180,	0,49804,67284,
#Partially deleted in new
chr7	25547761	25551062	chr7:25547761-25551062	3	-	25547761	25547761	8553170	2	83,126,	0,3175,
#Partially deleted in new
chr7	25593350	25663053	chr7:25593350-25663053	3	-	25593350	25593350	8553170	4	1366,134,62,308,	0,64609,68319,69395,
#Partially deleted in new
chr7	25594532	25750994	chr7:25594532-25750994	0	-	25594532	25594532	8553170	4	184,134,62,209,	0,63427,67137,156253,
#Deleted in new
chr7	25657070	25662941	chr7:25657070-25662941	1	-	25657070	25657070	8553170	3	1023,62,196,	0,4599,5675,
#Deleted in new
chr7	25689579	25689959	chr7:25689579-25689959	7	-	25689579	25689579	16724991	1	380,	0,
#Deleted in new
chr7	25948656	25949403	chr7:25948656-25949403	3	-	25948656	25948656	8553170	1	747,	0,
#Deleted in new
chr7	25949918	25949986	chr7:25949918-25949986	3	-	25949918	25949918	5263520	1	68,	0,
#Partially deleted in new
chr7	26152239	26187125	chr7:26152239-26187125	3	+	26152498	26185783	789624	4	829,180,84,2593,	0,25703,31461,32293,
#Partially deleted in new
chr7	26173056	26201301	chr7:26173056-26201301	3	-	26192515	26200577	8553170	11	1726,83,123,120,63,81,102,211,147,111,730,	0,19438,20194,20518,22790,23344,23500,23750,24258,24565,27515,
#Partially deleted in new
chr7	26178002	26183874	chr7:26178002-26183874	0	+	26178002	26183832	789624	2	120,174,	0,5698,
#Deleted in new
chr7	26184059	26186317	chr7:26184059-26186317	0	+	26184059	26184059	8553170	1	2258,	0,
#Partially deleted in new
chr7	26189926	26200746	chr7:26189926-26200746	1	-	26192515	26200577	0	12	2412,83,123,120,63,81,102,211,147,111,36,175,	0,2568,3324,3648,5920,6474,6630,6880,7388,7695,7904,10645,
#Deleted in new
chr7	26189926	26191678	chr7:26189926-26191678	0	-	26189926	26189926	8553170	2	534,686,	0,1066,
#Partially deleted in new
chr7	26189935	26200793	chr7:26189935-26200793	1	-	26193301	26200577	789624	11	2403,83,123,120,9,74,211,147,111,36,222,	0,2559,3315,3639,5911,6649,6871,7379,7686,7895,10636,
#Partially deleted in new
chr7	26190124	26200746	chr7:26190124-26200746	0	-	26192515	26200577	0	13	336,136,83,123,120,63,81,102,211,147,111,36,175,	0,868,2370,3126,3450,5722,6276,6432,6682,7190,7497,7706,10447,
#Partially deleted in new
chr7	26190303	26200784	chr7:26190303-26200784	0	-	26190303	26190303	8553170	9	2274,123,120,63,81,102,211,147,3163,	0,2947,3271,5543,6097,6253,6503,7011,7318,
#Partially deleted in new
chr7	26191843	26200746	chr7:26191843-26200746	1	-	26192515	26200577	0	11	495,83,123,120,63,81,102,211,147,111,175,	0,651,1407,1731,4003,4557,4713,4963,5471,5778,8728,
#Partially deleted in new
chr7	26191848	26201529	chr7:26191848-26201529	0	-	26191848	26191848	8553170	10	490,83,123,120,63,81,102,211,147,3908,	0,646,1402,1726,3998,4552,4708,4958,5466,5773,
#Deleted in new
chr7	26195711	26196907	chr7:26195711-26196907	0	-	26195711	26195711	8553170	4	198,81,102,101,	0,689,845,1095,
#Partially deleted in new
chr7	26201161	26213356	chr7:26201161-26213356	3	+	26202998	26212208	0	6	400,52,143,163,95,1275,	0,1809,5206,7231,10500,10920,
#Partially deleted in new
chr7	26201692	26213351	chr7:26201692-26213351	1	+	26202998	26212208	0	6	134,52,143,163,95,1270,	0,1278,4675,6700,9969,10389,
#Partially deleted in new
chr7	26201756	26208412	chr7:26201756-26208412	0	+	26202998	26208412	789624	4	853,52,143,20,	0,1214,4611,6636,
#Partially deleted in new
chr7	26201764	26213356	chr7:26201764-26213356	1	+	26202998	26211710	789624	6	62,52,143,90,95,1275,	0,1206,4603,6701,9897,10317,
#Partially deleted in new
chr7	26202462	26211717	chr7:26202462-26211717	0	+	26202462	26202462	8553170	4	560,143,163,56,	0,3905,5930,9199,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	26206035	26208476	chr7:26206035-26208476	0	+	26206035	26206035	8553170	2	475,84,	0,2357,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	26206367	26210582	chr7:26206367-26210582	0	+	26206367	26209957	789624	3	143,163,643,	0,2025,3572,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	26208132	26212423	chr7:26208132-26212423	0	+	26208132	26208132	8553170	3	423,95,342,	0,3529,3949,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	26226412	26254709	chr7:26226412-26254709	3	-	26226412	26226412	8553170	2	245,452,	0,27845,
#Partially deleted in new
chr7	26276194	26276606	chr7:26276194-26276606	7	+	26276194	26276194	16724991	1	412,	0,
#Partially deleted in new
chr7	26291894	26374317	chr7:26291894-26374317	3	+	26346442	26372572	0	7	239,47,87,101,99,213,1827,	0,54525,69080,72640,73152,79926,80596,
#Partially deleted in new
chr7	26291920	26372022	chr7:26291920-26372022	0	+	26357025	26372022	789624	7	166,47,121,87,101,99,202,	0,54499,65086,69054,72614,73126,79900,
#Partially deleted in new
chr7	26291922	26374325	chr7:26291922-26374325	1	+	26346442	26372572	0	7	164,47,87,101,99,213,1835,	0,54497,69052,72612,73124,79898,80568,
#Partially deleted in new
chr7	26292010	26361031	chr7:26292010-26361031	0	+	26357025	26361031	789624	5	76,47,128,121,57,	0,54409,62046,64996,68964,
#Partially deleted in new
chr7	26293053	26374329	chr7:26293053-26374329	1	+	26346442	26372572	0	7	105,47,87,101,99,213,1839,	0,53366,67921,71481,71993,78767,79437,
#Partially deleted in new
chr7	26354056	26372608	chr7:26354056-26372608	1	+	26364543	26372572	789624	6	128,87,101,99,213,118,	0,6918,10478,10990,17764,18434,
#Partially deleted in new
chr7	26364324	26372944	chr7:26364324-26372944	1	+	26365086	26372572	0	4	178,99,213,454,	0,722,7496,8166,
#Deleted in new
chr7	26370387	26372746	chr7:26370387-26372746	0	+	26370387	26370387	8553170	3	337,213,256,	0,1433,2103,
#Deleted in new
chr7	26372143	26376272	chr7:26372143-26376272	1	-	26372143	26372143	789624	2	425,186,	0,3943,
#Deleted in new
chr7	26372331	26376701	chr7:26372331-26376701	3	-	26372331	26372331	789624	2	237,271,	0,4099,
#Partially deleted in new
chr7	26398592	26494256	chr7:26398592-26494256	3	+	26398592	26398592	8553170	2	429,462,	0,95202,
#Partially deleted in new
chr7	26398600	26494144	chr7:26398600-26494144	1	+	26398600	26398600	8553170	3	421,136,350,	0,41769,95194,
#Partially deleted in new
chr7	26398600	26480022	chr7:26398600-26480022	0	+	26398600	26398600	8553170	2	421,155,	0,81267,
#Deleted in new
chr7	26398612	26399563	chr7:26398612-26399563	1	+	26398612	26398612	8553170	2	409,318,	0,633,
#Deleted in new
chr7	26398651	26399654	chr7:26398651-26399654	0	+	26398651	26398651	8553170	2	87,409,	0,594,
#Partially deleted in new
chr7	26440258	26494114	chr7:26440258-26494114	0	+	26440258	26440258	8553170	2	247,320,	0,53536,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	26533120	26538788	chr7:26533120-26538788	3	-	26533120	26533120	5263520	2	3900,383,	0,5285,
#Deleted in new
chr7	26538377	26541048	chr7:26538377-26541048	3	+	26538377	26538377	8553170	1	2671,	0,
#Deleted in new
chr7	26551821	26557200	chr7:26551821-26557200	3	+	26551821	26551821	8553170	2	389,2392,	0,2987,
#Deleted in new
chr7	26551838	26555114	chr7:26551838-26555114	1	+	26551838	26551838	8553170	3	372,111,93,	0,2970,3183,
#Deleted in new
chr7	26551895	26555276	chr7:26551895-26555276	0	+	26551895	26551895	8553170	2	315,255,	0,3126,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	26637870	26647270	chr7:26637870-26647270	3	+	26637870	26637870	8553170	4	66,850,69,971,	0,624,2825,8429,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	26638456	26647305	chr7:26638456-26647305	0	+	26638456	26638456	8553170	3	888,69,1006,	0,2239,7843,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	26667061	26864743	chr7:26667061-26864743	3	-	26670099	26864429	0	13	2595,102,113,78,138,64,125,84,78,108,26,106,381,	0,3029,17674,23223,58366,58861,59820,71733,72825,176968,187075,187723,197301,
#Partially deleted in new
chr7	26690306	26742475	chr7:26690306-26742475	0	-	26690306	26690306	8553170	7	56,138,64,125,84,78,134,	0,35121,35616,36575,48488,49580,52035,
#Partially deleted in new
chr7	26726681	26857678	chr7:26726681-26857678	0	-	26726681	26726681	8553170	7	325,84,78,108,26,106,228,	0,12113,13205,117348,127455,128103,130769,
#Partially deleted in new
chr7	26726888	26855151	chr7:26726888-26855151	0	-	26726888	26726888	8553170	7	118,84,78,108,26,106,34,	0,11906,12998,117141,127248,127896,128229,
#Partially deleted in new
chr7	26738839	26995239	chr7:26738839-26995239	0	-	26738839	26893860	789624	7	39,78,108,26,106,135,85,	0,1047,105190,115297,115945,154999,256315,
#Partially deleted in new
chr7	26739886	26858159	chr7:26739886-26858159	0	-	26739886	26739886	8553170	5	78,108,26,106,240,	0,104143,114250,114898,118033,
#Partially deleted in new
chr7	26746566	26864587	chr7:26746566-26864587	0	-	26746566	26746566	8553170	5	120,108,26,106,225,	0,97463,107570,108218,117796,
#Partially deleted in new
chr7	26844028	26865113	chr7:26844028-26865113	0	-	26844028	26844028	8553170	4	109,26,106,272,	0,10108,10756,20813,
#Partially deleted in new
chr7	26844029	26864585	chr7:26844029-26864585	0	-	26844029	26844029	8553170	5	108,73,26,106,223,	0,3966,10107,10755,20333,
#Deleted in new
chr7	26922109	26922912	chr7:26922109-26922912	7	+	26922109	26922109	16724991	1	803,	0,
#Deleted in new
chr7	26982767	26983367	chr7:26982767-26983367	7	-	26982767	26982767	16724991	1	600,	0,
#Partially deleted in new
chr7	27023736	27024907	chr7:27023736-27024907	7	+	27023736	27023736	16724991	2	290,465,	0,706,
#Deleted in new
chr7	27048168	27048628	chr7:27048168-27048628	7	+	27048168	27048168	16724991	1	460,	0,
#Deleted in new
chr7	27092992	27095974	chr7:27092992-27095974	3	-	27094439	27095912	789624	2	1803,714,	0,2268,
#Deleted in new
chr7	27093312	27095996	chr7:27093312-27095996	1	-	27095295	27095912	789624	3	1483,95,438,	0,1948,2246,
#Deleted in new
chr7	27093312	27095988	chr7:27093312-27095988	1	-	27094439	27095912	789624	2	1483,728,	0,1948,
#Deleted in new
chr7	27095646	27096327	chr7:27095646-27096327	0	+	27095646	27095646	8553170	2	26,137,	0,544,
#Deleted in new
chr7	27096093	27100154	chr7:27096093-27100154	0	+	27096093	27096093	789624	2	295,376,	0,3685,
#Deleted in new
chr7	27096123	27099966	chr7:27096123-27099966	1	+	27096123	27096123	789624	3	265,269,188,	0,2974,3655,
#Deleted in new
chr7	27096123	27096248	chr7:27096123-27096248	3	+	27096123	27096123	8553170	1	125,	0,
#Deleted in new
chr7	27096232	27099966	chr7:27096232-27099966	0	+	27096232	27096232	8553170	3	156,293,188,	0,2841,3546,
#Deleted in new
chr7	27098838	27100139	chr7:27098838-27100139	1	+	27098838	27098838	8553170	2	528,361,	0,940,
#Deleted in new
chr7	27098899	27099114	chr7:27098899-27099114	3	+	27098899	27098899	8553170	1	215,	0,
#Deleted in new
chr7	27099618	27100265	chr7:27099618-27100265	2	+	27099618	27099618	8553170	1	647,	0,
#Deleted in new
chr7	27099777	27099836	chr7:27099777-27099836	3	+	27099777	27099777	8553170	1	59,	0,
#Deleted in new
chr7	27099855	27099957	chr7:27099855-27099957	3	+	27099855	27099855	8553170	1	102,	0,
#Deleted in new
chr7	27099966	27100111	chr7:27099966-27100111	3	+	27099966	27099966	8553170	1	145,	0,
#Deleted in new
chr7	27100353	27102811	chr7:27100353-27102811	3	-	27100725	27102500	789624	2	1112,702,	0,1756,
#Deleted in new
chr7	27100693	27102686	chr7:27100693-27102686	0	-	27100693	27100693	8553170	1	1993,	0,
#Deleted in new
chr7	27106183	27119595	chr7:27106183-27119595	1	-	27107914	27110640	789624	3	2537,646,80,	0,3931,13332,
#Partially deleted in new
chr7	27106189	27127020	chr7:27106189-27127020	1	-	27107914	27110640	789624	4	2531,646,84,135,	0,3925,16369,20696,
#Partially deleted in new
chr7	27107011	27140219	chr7:27107011-27140219	3	-	27107914	27110640	789624	5	1709,646,84,185,137,	0,3103,15547,19874,33071,
#Partially deleted in new
chr7	27107776	27122173	chr7:27107776-27122173	3	+	27107776	27107776	8553170	3	93,161,255,	0,2258,14142,
#Partially deleted in new
chr7	27110387	27140206	chr7:27110387-27140206	0	-	27110387	27110640	789624	3	373,84,124,	0,12171,29695,
#Deleted in new
chr7	27110478	27113845	chr7:27110478-27113845	0	-	27110478	27110640	789624	2	282,221,	0,3146,
#Partially deleted in new
chr7	27110690	27140225	chr7:27110690-27140225	0	-	27110690	27110690	8553170	5	70,84,116,185,143,	0,11868,13743,16195,29392,
#Partially deleted in new
chr7	27113935	27122199	chr7:27113935-27122199	0	+	27113935	27113935	8553170	2	58,281,	0,7983,
#Partially deleted in new
chr7	27115347	27123377	chr7:27115347-27123377	1	+	27115347	27115347	8553170	2	996,1459,	0,6571,
#Partially deleted in new
chr7	27115404	27122173	chr7:27115404-27122173	0	+	27115404	27115404	8553170	2	167,255,	0,6514,
#Deleted in new
chr7	27116035	27116664	chr7:27116035-27116664	0	+	27116035	27116035	8553170	1	629,	0,
#Deleted in new
chr7	27120936	27122650	chr7:27120936-27122650	0	+	27120936	27120936	8553170	2	257,732,	0,982,
#Partially deleted in new
chr7	27121916	27128760	chr7:27121916-27128760	1	+	27121916	27121916	789624	4	110,200,1151,561,	0,550,1543,6283,
#Deleted in new
chr7	27122442	27123818	chr7:27122442-27123818	0	+	27122442	27122442	8553170	2	224,359,	0,1017,
#Partially deleted in new
chr7	27122547	27134302	chr7:27122547-27134302	1	+	27122547	27122547	8553170	4	119,179,280,222,	0,912,1783,11533,
#Partially deleted in new
chr7	27122575	27128693	chr7:27122575-27128693	0	+	27122575	27122575	8553170	3	91,179,494,	0,884,5624,
#Deleted in new
chr7	27123167	27124267	chr7:27123167-27124267	0	+	27123167	27123167	8553170	3	58,179,256,	0,292,844,
#Deleted in new
chr7	27126927	27152581	chr7:27126927-27152581	0	-	27126927	27126927	8553170	3	143,104,294,	0,13155,25360,
#Deleted in new
chr7	27128506	27130799	chr7:27128506-27130799	3	-	27129224	27130733	789624	2	1065,682,	0,1611,
#Deleted in new
chr7	27128506	27130780	chr7:27128506-27130780	1	-	27129224	27130733	789624	2	1065,663,	0,1611,
#Deleted in new
chr7	27128532	27130733	chr7:27128532-27130733	1	-	27129224	27130733	789624	3	376,603,616,	0,436,1585,
#Deleted in new
chr7	27128663	27130191	chr7:27128663-27130191	0	-	27129224	27130191	789624	2	908,74,	0,1454,
#Deleted in new
chr7	27128968	27152561	chr7:27128968-27152561	3	-	27128968	27128968	8553170	3	541,104,274,	0,11114,23319,
#Deleted in new
chr7	27129976	27152576	chr7:27129976-27152576	0	+	27129976	27129976	8553170	3	172,107,283,	0,21598,22317,
#Deleted in new
chr7	27140363	27152697	chr7:27140363-27152697	0	+	27140363	27140363	789624	3	176,107,404,	0,11211,11930,
#Deleted in new
chr7	27141051	27143668	chr7:27141051-27143668	3	-	27141834	27143607	789624	2	1034,623,	0,1994,
#Deleted in new
chr7	27141806	27142775	chr7:27141806-27142775	0	-	27141806	27141806	8553170	2	279,50,	0,919,
#Deleted in new
chr7	27145395	27147774	chr7:27145395-27147774	3	-	27145657	27147749	789624	2	522,467,	0,1912,
#Deleted in new
chr7	27145661	27150603	chr7:27145661-27150603	0	-	27145661	27145661	8553170	3	256,262,296,	0,1646,4646,
#Deleted in new
chr7	27147162	27155928	chr7:27147162-27155928	1	+	27147162	27147162	789624	3	250,107,3635,	0,4412,5131,
#Deleted in new
chr7	27147365	27152598	chr7:27147365-27152598	3	-	27147365	27147365	8553170	2	57,311,	0,4922,
#Deleted in new
chr7	27147482	27152703	chr7:27147482-27152703	0	+	27147482	27147482	8553170	3	104,107,410,	0,4092,4811,
#Deleted in new
chr7	27150051	27152726	chr7:27150051-27152726	3	+	27150051	27150051	8553170	2	1630,433,	0,2242,
#Deleted in new
chr7	27153715	27156677	chr7:27153715-27156677	3	-	27154908	27156545	789624	2	1507,511,	0,2451,
#Deleted in new
chr7	27154782	27155998	chr7:27154782-27155998	0	-	27154782	27154782	8553170	2	440,32,	0,1184,
#Deleted in new
chr7	27156453	27157936	chr7:27156453-27157936	0	-	27156453	27156545	789624	3	301,171,113,	0,664,1370,
#Deleted in new
chr7	27158343	27158976	chr7:27158343-27158976	3	+	27158343	27158343	8553170	1	633,	0,
#Deleted in new
chr7	27162434	27165530	chr7:27162434-27165530	3	-	27163602	27165457	789624	2	1407,653,	0,2443,
#Deleted in new
chr7	27162599	27169444	chr7:27162599-27169444	0	-	27162599	27162599	8553170	2	1242,151,	0,6694,
#Deleted in new
chr7	27163306	27170498	chr7:27163306-27170498	0	-	27163306	27163306	8553170	3	535,90,68,	0,1571,7124,
#Deleted in new
chr7	27163520	27165526	chr7:27163520-27165526	1	-	27164963	27165457	789624	3	321,90,386,	0,1357,1620,
#Deleted in new
chr7	27163534	27180013	chr7:27163534-27180013	3	-	27163602	27179655	789624	3	307,90,368,	0,1343,16111,
#Deleted in new
chr7	27163663	27175180	chr7:27163663-27175180	0	-	27163663	27163663	8553170	2	178,479,	0,11038,
#Deleted in new
chr7	27163681	27169737	chr7:27163681-27169737	0	-	27163681	27163681	8553170	3	160,90,271,	0,1196,5785,
#Deleted in new
chr7	27168618	27171373	chr7:27168618-27171373	0	+	27168618	27168618	8553170	2	375,66,	0,2689,
#Deleted in new
chr7	27168898	27171915	chr7:27168898-27171915	3	+	27168898	27168898	789624	3	95,458,608,	0,408,2409,
#Deleted in new
chr7	27169093	27171765	chr7:27169093-27171765	0	+	27169093	27169093	8553170	2	671,458,	0,2214,
#Deleted in new
chr7	27169479	27169563	chr7:27169479-27169563	3	-	27169479	27169479	5263520	1	84,	0,
#Deleted in new
chr7	27170590	27174306	chr7:27170590-27174306	3	-	27171898	27174306	789624	2	1583,958,	0,2758,
#Deleted in new
chr7	27170591	27174255	chr7:27170591-27174255	1	-	27172157	27174255	789624	3	1582,269,324,	0,2757,3340,
#Deleted in new
chr7	27171219	27180261	chr7:27171219-27180261	1	-	27171898	27179655	789624	2	954,616,	0,8426,
#Deleted in new
chr7	27171377	27172963	chr7:27171377-27172963	0	-	27171377	27171377	8553170	2	796,146,	0,1440,
#Deleted in new
chr7	27171462	27172889	chr7:27171462-27172889	0	-	27171462	27171462	8553170	2	711,476,	0,951,
#Deleted in new
chr7	27171776	27172889	chr7:27171776-27172889	0	-	27171776	27171776	8553170	2	397,326,	0,787,
#Deleted in new
chr7	27181509	27185223	chr7:27181509-27185223	0	-	27182795	27185223	789624	3	1519,550,68,	0,2926,3646,
#Deleted in new
chr7	27181514	27185216	chr7:27181514-27185216	3	-	27182795	27185144	789624	2	1514,781,	0,2921,
#Deleted in new
chr7	27184506	27189298	chr7:27184506-27189298	0	+	27184506	27184506	8553170	3	578,155,698,	0,1602,4094,
#Deleted in new
chr7	27184571	27188797	chr7:27184571-27188797	0	+	27184571	27184571	8553170	2	513,197,	0,4029,
#Deleted in new
chr7	27184670	27189169	chr7:27184670-27189169	1	+	27184670	27184670	8553170	5	574,224,217,155,569,	0,738,1077,1438,3930,
#Deleted in new
chr7	27185234	27186229	chr7:27185234-27186229	0	+	27185234	27185234	8553170	2	369,482,	0,513,
#Deleted in new
chr7	27185407	27189293	chr7:27185407-27189293	1	+	27185407	27185407	789624	2	856,693,	0,3193,
#Deleted in new
chr7	27185422	27189298	chr7:27185422-27189298	1	+	27185422	27185422	8553170	3	210,192,698,	0,649,3178,
#Deleted in new
chr7	27185431	27188897	chr7:27185431-27188897	2	+	27185431	27185431	8553170	2	201,297,	0,3169,
#Deleted in new
chr7	27185432	27185530	chr7:27185432-27185530	3	+	27185432	27185432	8553170	1	98,	0,
#Deleted in new
chr7	27185533	27187153	chr7:27185533-27187153	0	+	27185533	27185533	8553170	2	730,471,	0,1149,
#Deleted in new
chr7	27185831	27186018	chr7:27185831-27186018	3	+	27185831	27185831	8553170	1	187,	0,
#Deleted in new
chr7	27186133	27189083	chr7:27186133-27189083	1	+	27186133	27186133	8553170	3	130,209,483,	0,549,2467,
#Deleted in new
chr7	27186165	27186263	chr7:27186165-27186263	3	+	27186165	27186165	8553170	1	98,	0,
#Deleted in new
chr7	27186572	27193448	chr7:27186572-27193448	3	-	27186572	27186572	8553170	2	251,305,	0,6571,
#Deleted in new
chr7	27186891	27187124	chr7:27186891-27187124	3	+	27186891	27186891	8553170	1	233,	0,
#Deleted in new
chr7	27187818	27189222	chr7:27187818-27189222	0	+	27187818	27187818	8553170	2	202,622,	0,782,
#Deleted in new
chr7	27187818	27188021	chr7:27187818-27188021	3	+	27187818	27187818	8553170	1	203,	0,
#Deleted in new
chr7	27188815	27188994	chr7:27188815-27188994	3	+	27188815	27188815	8553170	1	179,	0,
#Deleted in new
chr7	27193502	27195600	chr7:27193502-27195600	0	-	27193502	27193502	8553170	2	56,815,	0,1283,
#Deleted in new
chr7	27194363	27200106	chr7:27194363-27200106	3	-	27198197	27200077	0	2	4079,951,	0,4792,
#Deleted in new
chr7	27194363	27200091	chr7:27194363-27200091	1	-	27198197	27200077	8553170	2	4079,936,	0,4792,
#Deleted in new
chr7	27198574	27201236	chr7:27198574-27201236	0	+	27198574	27198574	8553170	2	167,614,	0,2048,
#Deleted in new
chr7	27199244	27201823	chr7:27199244-27201823	0	+	27199244	27199244	8553170	2	86,1201,	0,1378,
#Deleted in new
chr7	27200436	27202822	chr7:27200436-27202822	1	+	27200436	27200436	8553170	2	85,2200,	0,186,
#Deleted in new
chr7	27200464	27200521	chr7:27200464-27200521	3	+	27200464	27200464	8553170	1	57,	0,
#Deleted in new
chr7	27201843	27207259	chr7:27201843-27207259	3	+	27201843	27201843	8553170	2	795,2548,	0,2868,
#Deleted in new
chr7	27201843	27202219	chr7:27201843-27202219	3	+	27201843	27201843	8553170	1	376,	0,
#Deleted in new
chr7	27202301	27202638	chr7:27202301-27202638	3	+	27202301	27202301	8553170	1	337,	0,
#Deleted in new
chr7	27206138	27206303	chr7:27206138-27206303	3	+	27206138	27206138	8553170	1	165,	0,
#Deleted in new
chr7	27239242	27241228	chr7:27239242-27241228	3	-	27239242	27239242	8553170	2	733,24,	0,1962,
#Deleted in new
chr7	27241428	27247229	chr7:27241428-27247229	3	-	27241428	27241428	789624	4	22,93,96,269,	0,120,486,5532,
#Deleted in new
chr7	27241929	27242962	chr7:27241929-27242962	1	-	27241929	27241929	8553170	2	81,495,	0,538,
#Deleted in new
chr7	27241949	27243959	chr7:27241949-27243959	1	-	27241949	27241949	8553170	3	61,107,386,	0,680,1624,
#Deleted in new
chr7	27242699	27246425	chr7:27242699-27246425	1	+	27243030	27245281	789624	3	703,257,540,	0,2348,3186,
#Deleted in new
chr7	27242699	27247825	chr7:27242699-27247825	3	+	27243030	27246425	789624	3	758,257,1940,	0,2348,3186,
#Deleted in new
chr7	27243367	27247176	chr7:27243367-27247176	0	+	27243367	27245281	789624	4	35,52,257,1291,	0,1099,1680,2518,
#Deleted in new
chr7	27247367	27250493	chr7:27247367-27250493	0	+	27247367	27247367	8553170	2	34,346,	0,2780,
#Deleted in new
chr7	27269356	27269678	chr7:27269356-27269678	7	-	27269356	27269356	16724991	1	322,	0,
#Deleted in new
chr7	27328606	27329534	chr7:27328606-27329534	7	-	27328606	27328606	16724991	1	928,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	27361842	27409938	chr7:27361842-27409938	3	+	27361842	27361842	8553170	5	128,150,121,150,18,	0,17506,42362,46966,48078,
#Deleted in new
chr7	27380561	27381206	chr7:27380561-27381206	3	+	27380561	27380561	8553170	1	645,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	27412163	27412891	chr7:27412163-27412891	3	+	27412163	27412163	8553170	1	728,	0,
#Deleted in new
chr7	27458162	27458849	chr7:27458162-27458849	7	-	27458162	27458162	16724991	1	687,	0,
#Deleted in new
chr7	27461765	27462969	chr7:27461765-27462969	7	+	27461765	27461765	16724991	1	1204,	0,
#Deleted in new
chr7	27491681	27492765	chr7:27491681-27492765	7	-	27491681	27491681	16724991	1	1084,	0,
#Partially deleted in new
chr7	27525441	27662995	chr7:27525441-27662995	3	-	27526213	27662788	0	8	931,157,77,134,122,110,161,298,	0,5750,12899,17525,103929,106894,124031,137256,
#Partially deleted in new
chr7	27525474	27662868	chr7:27525474-27662868	0	-	27632416	27662788	789624	7	898,157,77,134,122,110,171,	0,5717,12866,17492,103896,106861,137223,
#Partially deleted in new
chr7	27531253	27647756	chr7:27531253-27647756	0	-	27531253	27647756	789624	6	95,77,134,122,106,84,	0,7087,11713,98117,101082,116419,
#Partially deleted in new
chr7	27649223	27662857	chr7:27649223-27662857	0	-	27649223	27649223	8553170	2	410,160,	0,13474,
#Partially deleted in new
chr7	27733063	27740395	chr7:27733063-27740395	3	-	27733063	27733063	8553170	2	810,380,	0,6952,
#Partially deleted in new
chr7	27739330	27765982	chr7:27739330-27765982	0	+	27748524	27765982	789624	4	220,169,103,149,	0,9187,18700,26503,
#Partially deleted in new
chr7	27739372	27829765	chr7:27739372-27829765	1	+	27748524	27828829	0	17	178,169,103,188,159,149,91,186,225,147,124,104,126,46,149,83,1138,	0,9145,18658,26461,30303,45790,46026,48045,52633,53693,54950,56743,60592,76976,77517,88365,89255,
#Partially deleted in new
chr7	27739601	27765864	chr7:27739601-27765864	0	+	27748524	27765864	789624	4	267,169,103,31,	0,8916,18429,26232,
#Partially deleted in new
chr7	27740094	27828881	chr7:27740094-27828881	1	+	27748524	27828829	0	17	175,169,103,188,159,149,91,186,225,147,124,104,126,46,149,83,254,	0,8423,17936,25739,29581,45068,45304,47323,51911,52971,54228,56021,59870,76254,76795,87643,88533,
#Partially deleted in new
chr7	27740094	27829765	chr7:27740094-27829765	1	+	27769693	27828829	0	16	175,169,103,159,149,91,186,225,147,124,104,126,46,149,83,1138,	0,8423,17936,29581,45068,45304,47323,51911,52971,54228,56021,59870,76254,76795,87643,88533,
#Partially deleted in new
chr7	27740141	27828881	chr7:27740141-27828881	1	+	27748524	27828829	789624	18	128,169,103,188,159,149,91,186,225,147,124,104,126,72,172,149,83,254,	0,8376,17889,25692,29534,45021,45257,47276,51864,52924,54181,55974,59823,62967,76207,76748,87596,88486,
#Partially deleted in new
chr7	27740146	27828864	chr7:27740146-27828864	0	+	27748524	27769686	789624	16	123,169,103,159,149,91,186,225,147,124,104,126,46,149,83,237,	0,8371,17884,29529,45016,45252,47271,51859,52919,54176,55969,59818,76202,76743,87591,88481,
#Partially deleted in new
chr7	27740168	27758351	chr7:27740168-27758351	0	+	27740168	27740168	8553170	3	101,169,321,	0,8349,17862,
#Partially deleted in new
chr7	27740188	27829263	chr7:27740188-27829263	3	+	27748524	27828829	0	17	81,169,103,188,159,149,91,186,225,147,124,104,126,172,149,83,636,	0,8329,17842,25645,29487,44974,45210,47229,51817,52877,54134,55927,59776,76160,76701,87549,88439,
#Deleted in new
chr7	27769677	27772539	chr7:27769677-27772539	0	+	27769677	27769677	8553170	2	157,613,	0,2249,
#Partially deleted in new
chr7	27793137	27829022	chr7:27793137-27829022	0	+	27793137	27828829	789624	9	75,124,104,126,72,46,149,83,395,	0,1185,2978,6827,9971,23211,23752,34600,35490,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	27827800	27844564	chr7:27827800-27844564	0	+	27827800	27840973	789624	3	20,156,3844,	0,827,12920,
#Deleted in new
chr7	27828699	27833151	chr7:27828699-27833151	0	+	27828699	27828699	8553170	2	84,443,	0,4009,
#Partially deleted in new
chr7	27830572	28180743	chr7:27830572-28180743	3	-	27832799	28180577	789624	5	2404,170,197,73,281,	0,10125,64647,161336,349890,
#Partially deleted in new
chr7	27830572	27992056	chr7:27830572-27992056	0	-	27832799	27992056	789624	4	2404,170,197,148,	0,10125,64647,161336,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	27830592	28180611	chr7:27830592-28180611	0	-	28101775	28180577	8553170	6	2384,170,197,73,186,149,	0,10105,64627,161316,271026,349870,
#Partially deleted in new
chr7	27832804	27864080	chr7:27832804-27864080	0	-	27832804	27832804	8553170	3	172,170,236,	0,7893,31040,
#Partially deleted in new
chr7	27832912	28071684	chr7:27832912-28071684	0	-	27832912	28071633	789624	5	64,170,197,73,67,	0,7785,62307,158996,238705,
#Partially deleted in new
chr7	27832914	27992252	chr7:27832914-27992252	0	-	27832914	27992212	789624	5	62,170,197,73,83,	0,7783,62305,158994,159255,
#Partially deleted in new
chr7	27840768	28180578	chr7:27840768-28180578	0	-	27914753	28180577	789624	5	99,197,79,73,116,	0,54451,73961,151140,339694,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	27846502	28020799	chr7:27846502-28020799	0	-	27846502	27846502	8553170	4	45,197,73,247,	0,48717,145406,174050,
#Partially deleted in new
chr7	27895218	28180632	chr7:27895218-28180632	0	-	27913440	28180577	789624	4	198,62,73,170,	0,18173,96690,285244,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	28118112	28118219	chr7:28118112-28118219	3	-	28118112	28118112	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	28239883	28243917	chr7:28239883-28243917	3	+	28239883	28239883	8553170	2	223,3461,	0,573,
#Deleted in new
chr7	28279210	28279700	chr7:28279210-28279700	7	-	28279210	28279210	16724991	1	490,	0,
#Partially deleted in new
chr7	28299320	28820000	chr7:28299320-28820000	1	+	28494929	28819279	789624	10	121,94,122,173,127,111,324,228,109,885,	0,195585,208295,271044,419432,424901,504878,509866,518750,519795,
#Partially deleted in new
chr7	28409334	28513838	chr7:28409334-28513838	0	+	28409334	28409334	8553170	5	89,72,94,122,375,	0,78840,85571,98281,104129,
#Partially deleted in new
chr7	28409366	28410441	chr7:28409366-28410441	0	+	28409366	28409366	8553170	2	57,546,	0,529,
#Partially deleted in new
chr7	28409375	28410753	chr7:28409375-28410753	0	+	28409375	28409375	8553170	2	48,1096,	0,282,
#Partially deleted in new
chr7	28409386	28570439	chr7:28409386-28570439	0	+	28488192	28570439	789624	7	37,119,44,72,94,122,75,	0,509,1340,78788,85519,98229,160978,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	28412524	28825894	chr7:28412524-28825894	3	+	28412914	28819279	789624	11	393,72,94,122,173,127,111,324,228,109,6779,	0,75650,82381,95091,157840,306228,311697,391674,396662,405546,406591,
#Partially deleted in new
chr7	28435614	28820000	chr7:28435614-28820000	1	+	28488192	28819279	789624	11	74,72,94,122,173,127,111,324,228,109,885,	0,52560,59291,72001,134750,283138,288607,368584,373572,382456,383501,
#Partially deleted in new
chr7	28491129	28819637	chr7:28491129-28819637	1	+	28494929	28819279	789624	10	134,94,122,173,127,111,324,228,109,522,	0,3776,16486,79235,227623,233092,313069,318057,326941,327986,
#Partially deleted in new
chr7	28570437	28749545	chr7:28570437-28749545	0	+	28570437	28570437	8553170	4	100,127,111,251,	0,148315,153784,178857,
#Partially deleted in new
chr7	28609060	28809317	chr7:28609060-28809317	0	+	28718810	28809317	789624	5	60,127,111,324,131,	0,109692,115161,195138,200126,
#Deleted in new
chr7	28615096	28615888	chr7:28615096-28615888	7	-	28615096	28615096	16724991	1	792,	0,
#Partially deleted in new
chr7	28685980	28820000	chr7:28685980-28820000	1	+	28686150	28819279	789624	7	217,127,111,324,228,109,885,	0,32772,38241,118218,123206,132090,133135,
#Partially deleted in new
chr7	28686136	28724676	chr7:28686136-28724676	0	+	28686136	28686136	8553170	3	61,127,455,	0,32616,38085,
#Partially deleted in new
chr7	28686136	28779228	chr7:28686136-28779228	0	+	28686136	28686136	8553170	4	61,127,111,284,	0,32616,38085,92808,
#Deleted in new
chr7	28724299	28726731	chr7:28724299-28726731	0	+	28724299	28724299	8553170	2	33,51,	0,2381,
#Partially deleted in new
chr7	28809408	28819559	chr7:28809408-28819559	0	+	28809408	28818765	789624	4	6,109,29,444,	0,8662,9352,9707,
#Partially deleted in new
chr7	28953357	28958292	chr7:28953357-28958292	3	-	28955610	28958046	789624	1	4935,	0,
#Partially deleted in new
chr7	28957666	28959345	chr7:28957666-28959345	3	+	28957666	28957666	8553170	2	192,396,	0,1283,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	28979966	29013367	chr7:28979966-29013367	3	+	28979966	28979966	789624	6	132,87,62,13,56,3345,	0,16198,21002,21076,21362,30056,
#Deleted in new
chr7	28987027	28988899	chr7:28987027-28988899	3	+	28987027	28987027	8553170	2	82,496,	0,1376,
#Partially deleted in new
chr7	28995230	29146537	chr7:28995230-29146537	1	-	28995771	29121061	789624	13	652,183,174,99,132,123,67,80,59,115,119,179,109,	0,35346,68830,70792,76542,77070,91253,97392,99853,100872,117473,125662,151198,
#Partially deleted in new
chr7	28995630	29146497	chr7:28995630-29146497	1	-	28995771	29121061	789624	13	252,183,174,99,132,123,67,80,59,115,119,179,157,	0,34946,68430,70392,76142,76670,90853,96992,99453,100472,117073,125262,150710,
#Partially deleted in new
chr7	28995633	29071845	chr7:28995633-29071845	0	-	28995771	29071845	789624	4	249,183,174,73,	0,34943,68427,76139,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr7	28995636	29195276	chr7:28995636-29195276	3	-	28995771	29121061	789624	17	246,183,174,99,132,123,67,80,59,115,119,179,123,128,85,101,200,	0,34940,68424,70386,76136,76664,90847,96986,99447,100466,117067,125256,185653,188784,189876,190810,199440,
#Partially deleted in new
chr7	28995636	29071904	chr7:28995636-29071904	0	-	28995771	29071904	789624	3	246,183,132,	0,34940,76136,
#Partially deleted in new
chr7	29000970	29010252	chr7:29000970-29010252	1	+	29000970	29000970	8553170	4	60,13,180,230,	0,72,234,9052,
#Deleted in new
chr7	29008925	29010252	chr7:29008925-29010252	0	+	29008925	29008925	8553170	1	1327,	0,
#Partially deleted in new
chr7	29066041	29112921	chr7:29066041-29112921	0	-	29066041	29112781	789624	8	80,132,123,67,80,59,115,218,	0,5731,6259,20442,26581,29042,30061,46662,
#Partially deleted in new
chr7	29072382	29096455	chr7:29072382-29096455	0	-	29072382	29096157	789624	6	41,67,80,59,115,163,	0,14101,20240,22701,23720,23910,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	29072397	29113768	chr7:29072397-29113768	0	-	29072397	29112781	789624	7	26,67,80,59,115,119,87,	0,14086,20225,22686,23705,40306,41284,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	29080283	29082527	chr7:29080283-29082527	3	+	29080283	29080283	8553170	3	45,138,206,	0,1057,2038,
#Partially deleted in new
chr7	29096102	29195236	chr7:29096102-29195236	0	-	29096102	29096102	8553170	5	115,119,179,123,160,	0,16601,24790,85187,98974,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	29120904	29195186	chr7:29120904-29195186	0	-	29120904	29121061	789624	4	167,123,128,110,	0,60385,63516,74172,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	29120930	29195451	chr7:29120930-29195451	0	-	29120930	29121061	789624	5	141,123,128,85,94,	0,60359,63490,64582,74427,
#Partially deleted in new
chr7	29121041	29195447	chr7:29121041-29195447	0	-	29121041	29121061	8553170	3	30,123,371,	0,60248,74035,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	29122273	29126579	chr7:29122273-29126579	1	+	29122273	29122273	8553170	2	369,251,	0,4055,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr7	29122339	29514667	chr7:29122339-29514667	3	+	29146583	29512735	789624	17	303,298,154,892,112,39,56,32,114,286,78,85,174,78,138,106,2104,	0,3989,5674,23514,24509,232285,245592,271339,276033,278203,357939,373612,377527,382404,384888,386961,390224,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	29122452	29146223	chr7:29122452-29146223	0	+	29122452	29122452	8553170	2	190,370,	0,23401,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	29124981	29128150	chr7:29124981-29128150	1	+	29124981	29124981	8553170	4	106,298,84,137,	0,1347,1874,3032,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	29125032	29128172	chr7:29125032-29128172	2	+	29125032	29125032	789624	3	55,298,159,	0,1296,2981,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	29125054	29128167	chr7:29125054-29128167	1	+	29125054	29125054	8553170	5	33,298,84,126,154,	0,1274,1801,2399,2959,
#Partially deleted in new
chr7	29128020	29146695	chr7:29128020-29146695	0	+	29146583	29146695	789624	2	147,842,	0,17833,
#Partially deleted in new
chr7	29146568	29400590	chr7:29146568-29400590	0	+	29146583	29400590	789624	7	177,112,39,56,32,114,48,	0,280,208056,221363,247110,251804,253974,
#Partially deleted in new
chr7	29146596	29480356	chr7:29146596-29480356	0	+	29146596	29400562	789624	7	149,39,56,32,114,286,78,	0,208028,221335,247082,251776,253946,333682,
#Deleted in new
chr7	29146631	29147304	chr7:29146631-29147304	0	+	29146631	29146631	8553170	2	114,456,	0,217,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	29191581	29194109	chr7:29191581-29194109	3	-	29191581	29191581	8553170	1	2528,	0,
#Partially deleted in new
chr7	29194411	29514328	chr7:29194411-29514328	3	+	29194941	29512735	0	13	579,39,56,32,114,286,78,85,174,78,138,106,1765,	0,160213,173520,199267,203961,206131,285867,301540,305455,310332,312816,314889,318152,
#Partially deleted in new
chr7	29194924	29400735	chr7:29194924-29400735	0	+	29194941	29400735	789624	7	66,39,39,56,32,114,193,	0,98000,159700,173007,198754,203448,205618,
#Partially deleted in new
chr7	29194941	29512735	chr7:29194941-29512735	1	+	29194941	29512661	789624	8	49,39,56,32,114,286,60,89,	0,159683,172990,198737,203431,205601,285337,317705,
#Partially deleted in new
chr7	29197924	29400600	chr7:29197924-29400600	0	+	29197924	29197924	8553170	8	59,116,73,39,56,32,114,58,	0,94923,134984,156700,170007,195754,200448,202618,
#Partially deleted in new
chr7	29199539	29208970	chr7:29199539-29208970	3	-	29199539	29199539	789624	3	584,56,158,	0,1152,9273,
#Deleted in new
chr7	29212301	29213214	chr7:29212301-29213214	7	+	29212301	29212301	16724991	1	913,	0,
#Partially deleted in new
chr7	29288880	29400781	chr7:29288880-29400781	0	+	29288880	29288880	8553170	6	260,39,56,32,114,239,	0,65744,79051,104798,109492,111662,
#Partially deleted in new
chr7	29335706	29367971	chr7:29335706-29367971	0	+	29335706	29335706	8553170	3	412,39,40,	0,18918,32225,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	29396647	29401281	chr7:29396647-29401281	0	+	29396647	29396647	8553170	2	1839,739,	0,3895,
#Partially deleted in new
chr7	29400699	29507303	chr7:29400699-29507303	0	+	29400699	29507303	789624	5	129,85,174,78,76,	0,95252,99167,104044,106528,
#Partially deleted in new
chr7	29479711	29514328	chr7:29479711-29514328	1	+	29480110	29512735	0	7	645,85,174,78,138,106,1765,	0,16240,20155,25032,27516,29589,32852,
#Partially deleted in new
chr7	29479945	29507301	chr7:29479945-29507301	0	+	29479945	29479945	8553170	5	276,85,174,78,74,	0,16006,19921,24798,27282,
#Partially deleted in new
chr7	29480010	29504820	chr7:29480010-29504820	0	+	29480010	29480010	8553170	5	138,78,85,174,77,	0,268,15941,19856,24733,
#Partially deleted in new
chr7	29480110	29514327	chr7:29480110-29514327	1	+	29480110	29512735	789624	5	246,85,174,106,1764,	0,15841,19756,29190,32453,
#Partially deleted in new
chr7	29480110	29512735	chr7:29480110-29512735	1	+	29480110	29512735	0	6	246,85,78,138,106,172,	0,15841,24633,27117,29190,32453,
#Partially deleted in new
chr7	29480110	29514327	chr7:29480110-29514327	1	+	29480110	29512735	789624	5	246,85,78,106,1764,	0,15841,24633,29190,32453,
#Partially deleted in new
chr7	29480110	29512735	chr7:29480110-29512735	1	+	29480110	29512574	789624	5	246,85,174,78,172,	0,15841,19756,24633,32453,
#Partially deleted in new
chr7	29483815	29512740	chr7:29483815-29512740	0	+	29483815	29483815	8553170	7	160,85,174,78,138,106,177,	0,12136,16051,20928,23412,25485,28748,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	29504794	29509681	chr7:29504794-29509681	0	+	29504794	29509410	789624	3	27,138,381,	0,2433,4506,
#Partially deleted in new
chr7	29514224	29563670	chr7:29514224-29563670	3	-	29514224	29514224	8553170	2	1093,283,	0,49163,
#Partially deleted in new
chr7	29514768	29563663	chr7:29514768-29563663	1	-	29514768	29514768	8553170	3	549,64,276,	0,47090,48619,
#Deleted in new
chr7	29551520	29552151	chr7:29551520-29552151	7	+	29551520	29551520	16724991	1	631,	0,
#Deleted in new
chr7	29563810	29567295	chr7:29563810-29567295	3	+	29566329	29566719	789624	2	567,1111,	0,2374,
#Deleted in new
chr7	29565449	29566383	chr7:29565449-29566383	0	+	29566329	29566383	789624	2	304,199,	0,735,
#Partially deleted in new
chr7	29598794	29685255	chr7:29598794-29685255	7	-	29598794	29598794	16724991	2	107,483,	0,85978,
#Deleted in new
chr7	29625869	29625983	chr7:29625869-29625983	7	+	29625869	29625869	16724991	1	114,	0,
#Partially deleted in new
chr7	29650226	29742594	chr7:29650226-29742594	7	+	29650226	29650226	16724991	19	181,308,25,97,138,121,94,58,92,100,78,69,71,102,72,47,99,126,448,	0,491,4808,7140,10079,37052,39923,44341,46726,51053,54201,59787,67762,70238,72094,74045,81721,83226,91920,
#Partially deleted in new
chr7	29651042	29685138	chr7:29651042-29685138	4	-	29651042	29651042	16724991	2	297,366,	0,33730,
#Deleted in new
chr7	29680733	29680828	chr7:29680733-29680828	3	-	29680733	29680733	5263520	1	95,	0,
#Partially deleted in new
chr7	29684641	29687892	chr7:29684641-29687892	4	+	29684641	29684641	16724991	2	381,614,	0,2637,
#Deleted in new
chr7	29684772	29685192	chr7:29684772-29685192	5	-	29684772	29684772	16724991	1	420,	0,
#Partially deleted in new
chr7	29685153	29688243	chr7:29685153-29688243	4	+	29685153	29685153	16724991	2	712,965,	0,2125,
#Partially deleted in new
chr7	29806485	29906175	chr7:29806485-29906175	1	+	29834724	29904386	789624	8	193,147,133,132,744,150,102,1890,	0,28182,69344,72523,77364,81582,82820,97800,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	29806553	29917066	chr7:29806553-29917066	3	+	29834724	29914516	789624	9	125,147,133,132,744,150,102,77,2574,	0,28114,69276,72455,77296,81514,82752,97732,107939,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	29834724	29917066	chr7:29834724-29917066	1	+	29834724	29914516	789624	8	90,133,132,744,150,102,77,2574,	0,41105,44284,49125,53343,54581,69561,79768,
#Partially deleted in new
chr7	29920102	29989798	chr7:29920102-29989798	1	-	29923956	29969067	789624	8	4013,181,166,195,203,182,160,157,	0,6349,16453,20579,23874,35076,48806,69539,
#Partially deleted in new
chr7	29920103	29990118	chr7:29920103-29990118	3	-	29923956	29969067	789624	8	4012,181,166,195,203,182,160,176,	0,6348,16452,20578,23873,35075,48805,69839,
#Partially deleted in new
chr7	29923561	29989712	chr7:29923561-29989712	1	-	29923956	29955315	789624	7	554,181,166,195,203,182,71,	0,2890,12994,17120,20415,31617,66080,
#Partially deleted in new
chr7	29923673	29969271	chr7:29923673-29969271	1	-	29923956	29969067	789624	7	442,181,166,195,203,182,363,	0,2778,12882,17008,20303,31505,45235,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	29923856	29990289	chr7:29923856-29990289	1	-	29923956	29990240	789624	8	259,181,166,195,203,182,160,108,	0,2595,12699,16825,20120,31322,45052,66325,
#Partially deleted in new
chr7	29940683	29990205	chr7:29940683-29990205	0	-	29940683	29969067	789624	5	193,203,182,160,263,	0,3293,14495,28225,49259,
#Partially deleted in new
chr7	29944043	29990072	chr7:29944043-29990072	0	-	29944043	29944043	8553170	4	136,182,105,130,	0,11135,24865,45899,
#Partially deleted in new
chr7	29944096	29969938	chr7:29944096-29969938	0	-	29944096	29969067	789624	4	83,182,160,135,	0,11082,24812,25707,
#Partially deleted in new
chr7	29947198	29989730	chr7:29947198-29989730	1	-	29947220	29969067	789624	4	104,182,160,89,	0,7980,21710,42443,
#Partially deleted in new
chr7	29947220	29969067	chr7:29947220-29969067	1	-	29947220	29969067	789624	3	82,182,159,	0,7958,21688,
#Partially deleted in new
chr7	29988599	30025660	chr7:29988599-30025660	0	+	29988599	29988599	8553170	3	194,150,274,	0,19628,36787,
#Partially deleted in new
chr7	29988599	30027543	chr7:29988599-30027543	3	+	29988599	29988599	8553170	4	194,335,150,2157,	0,290,19628,36787,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	30010586	30026684	chr7:30010586-30026684	3	-	30014734	30026508	0	4	4307,128,152,373,	0,8409,12078,15725,
#Partially deleted in new
chr7	30014287	30026662	chr7:30014287-30026662	0	-	30019119	30026508	789624	3	606,128,351,	0,4708,12024,
#Partially deleted in new
chr7	30014670	30026419	chr7:30014670-30026419	0	-	30020296	30026419	789624	5	223,128,92,152,108,	0,4325,5542,7994,11641,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	30022390	30026636	chr7:30022390-30026636	0	-	30022390	30022390	8553170	2	426,325,	0,3921,
#Partially deleted in new
chr7	30027403	30049211	chr7:30027403-30049211	0	+	30027403	30027403	8553170	5	144,117,156,125,21,	0,17681,18806,20428,21787,
#Partially deleted in new
chr7	30028360	30084660	chr7:30028360-30084660	3	+	30028762	30078787	0	14	442,117,156,125,159,41,158,157,86,59,131,71,62,6071,	0,16724,17849,19471,20863,22073,24348,26348,26896,32523,33536,34311,45710,50229,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	30028360	30118345	chr7:30028360-30118345	1	+	30028762	30117987	789624	14	442,117,156,125,159,41,158,157,86,59,131,71,62,376,	0,16724,17849,19471,20863,22073,24348,26348,26896,32523,33536,34311,45710,89609,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	30028361	30090744	chr7:30028361-30090744	1	+	30028762	30090175	0	13	441,117,156,125,159,41,158,157,86,59,131,71,592,	0,16723,17848,19470,20862,22072,24347,26347,26895,32522,33535,34310,61791,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr7	30028391	30130469	chr7:30028391-30130469	0	+	30028762	30034135	8553170	18	411,90,102,117,156,125,159,41,158,157,86,59,131,71,62,189,122,1204,	0,4412,5658,16693,17818,19440,20832,22042,24317,26317,26865,32492,33505,34280,45679,50198,100366,100874,
#Partially deleted in new
chr7	30028424	30129472	chr7:30028424-30129472	1	+	30028762	30129271	0	14	378,117,156,125,159,41,158,157,86,59,131,71,62,207,	0,16660,17785,19407,20799,22009,24284,26284,26832,32459,33472,34247,45646,100841,
#Partially deleted in new
chr7	30028440	30130483	chr7:30028440-30130483	1	+	30028762	30129285	789624	13	362,117,156,125,159,41,158,157,86,59,131,71,1218,	0,16644,17769,19391,20783,21993,24268,26268,26816,32443,33456,34231,100825,
#Partially deleted in new
chr7	30028684	30084663	chr7:30028684-30084663	0	+	30028684	30078787	789624	14	118,117,156,125,159,41,158,157,86,59,131,71,62,6074,	0,16400,17525,19147,20539,21749,24024,26024,26572,32199,33212,33987,45386,49905,
#Deleted in new
chr7	30046209	30050786	chr7:30046209-30050786	0	+	30046209	30046209	8553170	4	156,125,251,353,	0,1622,2981,4224,
#Partially deleted in new
chr7	30069657	30075115	chr7:30069657-30075115	3	-	30069657	30069657	8553170	3	149,312,57,	0,2155,5401,
#Deleted in new
chr7	30115844	30115994	chr7:30115844-30115994	3	-	30115844	30115844	8553170	1	150,	0,
#Partially deleted in new
chr7	30134809	30162762	chr7:30134809-30162762	3	+	30135136	30157548	789624	3	489,123,5325,	0,11367,22628,
#Partially deleted in new
chr7	30134987	30157969	chr7:30134987-30157969	1	+	30135136	30157548	789624	2	311,532,	0,22450,
#Partially deleted in new
chr7	30137258	30146295	chr7:30137258-30146295	0	+	30137583	30146295	789624	2	436,119,	0,8918,
#Partially deleted in new
chr7	30145800	30162760	chr7:30145800-30162760	1	+	30145896	30157548	789624	3	159,123,5323,	0,376,11637,
#Deleted in new
chr7	30157530	30159534	chr7:30157530-30159534	3	+	30157530	30157530	8553170	2	65,549,	0,1455,
#Deleted in new
chr7	30167803	30168004	chr7:30167803-30168004	7	+	30167803	30167803	16724991	1	201,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	30176386	30179014	chr7:30176386-30179014	3	-	30176386	30176386	8553170	2	596,78,	0,2550,
#Partially deleted in new
chr7	30284306	30367692	chr7:30284306-30367692	3	+	30285357	30362434	789624	5	1520,96,106,80,1658,	0,39335,71421,78070,81728,
#Partially deleted in new
chr7	30285573	30288993	chr7:30285573-30288993	0	+	30285573	30285573	8553170	2	253,236,	0,3184,
#Deleted in new
chr7	30289793	30289890	chr7:30289793-30289890	3	+	30289793	30289793	5263520	1	97,	0,
#Deleted in new
chr7	30289793	30289890	chr7:30289793-30289890	3	-	30289793	30289793	5263520	1	97,	0,
#Partially deleted in new
chr7	30362399	30412502	chr7:30362399-30412502	3	+	30362399	30362434	789624	4	57,261,176,172,	0,3635,49498,49931,
#Deleted in new
chr7	30371507	30372741	chr7:30371507-30372741	7	+	30371507	30371507	16724991	1	1234,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	30390884	30404055	chr7:30390884-30404055	3	+	30390884	30390884	789624	3	151,111,454,	0,12027,12717,
#Partially deleted in new
chr7	30390907	30412375	chr7:30390907-30412375	0	+	30390907	30390907	8553170	3	128,57,45,	0,20990,21423,
#Partially deleted in new
chr7	30424526	30478780	chr7:30424526-30478780	3	-	30425637	30456921	0	14	1184,84,84,84,84,84,84,84,1825,175,322,89,141,175,	0,4847,8569,11471,13046,21614,22440,23771,26689,30610,32194,34625,35374,54079,
#Partially deleted in new
chr7	30424529	30478738	chr7:30424529-30478738	0	-	30447093	30456921	789624	15	1181,106,84,84,84,84,84,134,84,1825,175,322,89,141,133,	0,3974,4844,8566,11468,13043,21611,22485,23768,26686,30607,32191,34622,35371,54076,
#Partially deleted in new
chr7	30424533	30447977	chr7:30424533-30447977	0	-	30424533	30424533	8553170	3	1177,84,1837,	0,4840,21607,
#Deleted in new
chr7	30424671	30425412	chr7:30424671-30425412	3	+	30424671	30424671	8553170	1	741,	0,
#Partially deleted in new
chr7	30425208	30433414	chr7:30425208-30433414	0	-	30425208	30425208	8553170	3	502,84,319,	0,4165,7887,
#Partially deleted in new
chr7	30456742	30478728	chr7:30456742-30478728	0	-	30456742	30456921	789624	5	300,89,141,141,123,	0,2409,3158,19105,21863,
#Partially deleted in new
chr7	30456742	30478636	chr7:30456742-30478636	0	-	30456742	30456921	789624	5	300,89,141,76,31,	0,2409,3158,7243,21863,
#Partially deleted in new
chr7	30456742	30478742	chr7:30456742-30478742	0	-	30456742	30456921	789624	5	300,89,141,90,137,	0,2409,3158,6866,21863,
#Partially deleted in new
chr7	30456784	30478784	chr7:30456784-30478784	0	-	30456784	30456921	789624	3	258,141,179,	0,3116,21821,
#Partially deleted in new
chr7	30496620	30504844	chr7:30496620-30504844	3	-	30497091	30504709	0	4	615,136,146,276,	0,2182,3915,7948,
#Partially deleted in new
chr7	30496620	30504829	chr7:30496620-30504829	0	-	30498923	30504709	789624	3	615,136,261,	0,2182,7948,
#Partially deleted in new
chr7	30496622	30504841	chr7:30496622-30504841	1	-	30497177	30504709	0	3	613,146,273,	0,3913,7946,
#Partially deleted in new
chr7	30496632	30504801	chr7:30496632-30504801	1	-	30497091	30504709	0	2	603,233,	0,7936,
#Partially deleted in new
chr7	30496783	30500680	chr7:30496783-30500680	0	-	30497818	30500680	789624	4	452,156,136,145,	0,957,2019,3752,
#Partially deleted in new
chr7	30496976	30504801	chr7:30496976-30504801	0	-	30498923	30504709	789624	4	259,156,136,233,	0,764,1826,7592,
#Partially deleted in new
chr7	30497001	30504799	chr7:30497001-30504799	1	-	30497177	30504709	0	4	234,156,146,231,	0,739,3534,7567,
#Partially deleted in new
chr7	30497076	30550761	chr7:30497076-30550761	3	-	30497091	30500567	789624	5	159,136,146,120,126,	0,1726,3459,27290,53559,
#Partially deleted in new
chr7	30497472	30504816	chr7:30497472-30504816	1	-	30497818	30504709	789624	4	424,136,146,248,	0,1330,3063,7096,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	30516308	30562825	chr7:30516308-30562825	3	-	30516308	30516308	8553170	5	204,120,146,663,84,	0,8058,34327,45157,46433,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	30516974	30561516	chr7:30516974-30561516	1	-	30516974	30516974	8553170	6	524,120,146,78,80,51,	0,7392,33661,34343,35125,44491,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	30517205	30524380	chr7:30517205-30524380	1	-	30517205	30517205	8553170	3	293,89,69,	0,4558,7106,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	30523142	30524535	chr7:30523142-30524535	7	-	30523142	30523142	16724991	1	1393,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	30523974	30563998	chr7:30523974-30563998	1	-	30523974	30523974	8553170	3	512,146,268,	0,26661,39756,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	30525730	30533613	chr7:30525730-30533613	3	+	30525730	30525730	8553170	3	87,63,218,	0,6936,7665,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	30528355	30561487	chr7:30528355-30561487	0	-	30528355	30528355	8553170	4	360,146,80,22,	0,22280,23744,33110,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	30533241	30561487	chr7:30533241-30561487	0	-	30533241	30533241	8553170	4	172,146,80,22,	0,17394,18858,28224,
#Partially deleted in new
chr7	30544052	30544431	chr7:30544052-30544431	7	+	30544052	30544052	16724991	1	379,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	30544793	30552177	chr7:30544793-30552177	1	-	30544793	30544793	8553170	4	295,146,78,78,	0,5842,6524,7306,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	30547165	30550781	chr7:30547165-30550781	1	-	30547165	30547165	8553170	2	207,146,	0,3470,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	30548356	30564617	chr7:30548356-30564617	0	-	30548356	30548356	8553170	2	13772,895,	0,15366,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	30548358	30594743	chr7:30548358-30594743	0	-	30548358	30548358	8553170	9	2423,162,80,663,268,157,98,150,33,	0,2959,3741,13107,15372,20474,36352,36971,46352,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	30550317	30552220	chr7:30550317-30552220	0	-	30550317	30550317	8553170	2	464,121,	0,1782,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	30550320	30577759	chr7:30550320-30577759	0	-	30550320	30550320	789624	7	461,80,663,268,157,147,111,	0,1779,11145,13410,18512,26243,27328,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	30550458	30561703	chr7:30550458-30561703	1	-	30550458	30550458	8553170	3	61,146,238,	0,177,11007,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	30550567	30561519	chr7:30550567-30561519	0	-	30550567	30550567	8553170	4	214,78,80,54,	0,750,1532,10898,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	30558095	30573088	chr7:30558095-30573088	1	-	30558095	30558095	8553170	5	1260,663,268,157,89,	0,3370,5635,10737,14904,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	30561561	30573100	chr7:30561561-30573100	1	-	30561561	30561561	8553170	4	567,276,157,101,	0,2161,7271,11438,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	30562076	30594769	chr7:30562076-30594769	1	-	30562076	30562076	8553170	5	52,163,157,150,59,	0,1654,6756,23253,32634,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	30564143	30573782	chr7:30564143-30573782	0	-	30564143	30564143	8553170	3	655,157,783,	0,4689,8856,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	30564143	30573148	chr7:30564143-30573148	0	-	30564143	30564143	8553170	3	112,157,149,	0,4689,8856,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	30564146	30568994	chr7:30564146-30568994	0	-	30564146	30564146	8553170	2	327,162,	0,4686,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	30566403	30594769	chr7:30566403-30594769	0	-	30566403	30566403	8553170	3	2586,150,59,	0,18926,28307,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	30568676	30594763	chr7:30568676-30594763	1	-	30568676	30568676	8553170	4	313,31,150,53,	0,15746,16653,26034,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	30568801	30594795	chr7:30568801-30594795	0	-	30568801	30568801	8553170	4	188,98,150,85,	0,15909,16528,25909,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	30568832	30594760	chr7:30568832-30594760	1	-	30568832	30568832	8553170	5	157,123,84,150,50,	0,10173,10398,16497,25878,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	30574422	30576742	chr7:30574422-30576742	0	-	30574422	30574422	8553170	2	459,179,	0,2141,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	30577511	30585972	chr7:30577511-30585972	1	-	30577511	30577511	8553170	4	580,84,98,643,	0,1719,7199,7818,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	30577584	30594760	chr7:30577584-30594760	1	-	30577584	30577584	8553170	4	507,84,150,50,	0,1646,7745,17126,
#Partially deleted in new
chr7	30594680	30634033	chr7:30594680-30634033	3	+	30594921	30633860	0	17	463,102,103,142,89,77,146,150,163,165,108,146,86,110,94,191,299,	0,4115,5266,6378,8353,8815,14904,17415,21215,22433,26712,27636,31553,33879,36767,37566,39054,
#Deleted in new
chr7	30594837	30595841	chr7:30594837-30595841	1	+	30594921	30595841	789624	2	306,18,	0,986,
#Partially deleted in new
chr7	30594840	30603087	chr7:30594840-30603087	0	+	30594921	30595841	789624	6	303,110,102,103,142,54,	0,983,3955,5106,6218,8193,
#Partially deleted in new
chr7	30594883	30622688	chr7:30594883-30622688	0	+	30594883	30594883	8553170	12	260,102,103,142,89,77,146,150,163,165,108,372,	0,3912,5063,6175,8150,8612,14701,17212,21012,22230,26509,27433,
#Partially deleted in new
chr7	30614255	30621678	chr7:30614255-30621678	0	+	30614255	30614255	8553170	4	30,163,165,286,	0,1640,2858,7137,
#Partially deleted in new
chr7	30622127	30628607	chr7:30622127-30628607	0	+	30622127	30622127	8553170	3	335,86,48,	0,4106,6432,
#Partially deleted in new
chr7	30622328	30632307	chr7:30622328-30632307	0	+	30622328	30627070	789624	6	134,86,134,110,94,61,	0,3905,4728,6231,9119,9918,
#Partially deleted in new
chr7	30628489	30632419	chr7:30628489-30632419	0	+	30628489	30628489	8553170	3	180,94,173,	0,2958,3757,
#Partially deleted in new
chr7	30631148	30633911	chr7:30631148-30633911	0	+	30631148	30631148	8553170	3	393,191,177,	0,1098,2586,
#Partially deleted in new
chr7	30631964	30634033	chr7:30631964-30634033	0	+	30631964	30631964	8553170	2	473,299,	0,1770,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	30651942	30700103	chr7:30651942-30700103	1	-	30653459	30686449	0	14	1658,42,136,86,73,61,154,118,110,86,126,227,94,160,	0,3096,3637,3984,8630,10213,10751,13127,13587,15285,29972,34446,37248,48001,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	30651942	30682525	chr7:30651942-30682525	1	-	30654739	30682280	0	13	1658,111,42,136,86,73,61,154,118,110,86,126,348,	0,2755,3096,3637,3984,8630,10213,10751,13127,13587,15285,29972,30235,
#Partially deleted in new
chr7	30652583	30682698	chr7:30652583-30682698	3	-	30653459	30682280	0	12	1017,42,136,86,73,61,154,118,110,86,126,521,	0,2455,2996,3343,7989,9572,10110,12486,12946,14644,29331,29594,
#Partially deleted in new
chr7	30653246	30700103	chr7:30653246-30700103	1	-	30653459	30700033	0	13	354,42,136,86,73,61,154,118,110,86,126,94,160,	0,1792,2333,2680,7326,8909,9447,11823,12283,13981,28668,35944,46697,
#Partially deleted in new
chr7	30653246	30700063	chr7:30653246-30700063	0	-	30686604	30700033	789624	14	354,42,136,86,73,61,154,118,110,86,126,227,94,120,	0,1792,2333,2680,7326,8909,9447,11823,12283,13981,28668,33142,35944,46697,
#Partially deleted in new
chr7	30682219	30700045	chr7:30682219-30700045	0	-	30686604	30700033	789624	4	113,227,94,102,	0,4169,6971,17724,
#Partially deleted in new
chr7	30682219	30700045	chr7:30682219-30700045	0	-	30682219	30700033	789624	3	113,94,102,	0,6971,17724,
#Partially deleted in new
chr7	30686407	30700129	chr7:30686407-30700129	0	-	30686407	30686407	8553170	4	208,195,94,186,	0,2406,2783,13536,
#Partially deleted in new
chr7	30697984	30755970	chr7:30697984-30755970	0	+	30697984	30697984	8553170	4	246,54,208,549,	0,47298,55746,57437,
#Partially deleted in new
chr7	30698042	30700232	chr7:30698042-30700232	0	+	30698042	30698042	8553170	2	188,517,	0,1673,
#Deleted in new
chr7	30742430	30742818	chr7:30742430-30742818	7	-	30742430	30742430	16724991	1	388,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	30752134	30757602	chr7:30752134-30757602	3	+	30752150	30755851	0	3	170,208,2181,	0,1596,3287,
#Deleted in new
chr7	30752136	30755851	chr7:30752136-30755851	1	+	30752150	30755851	0	3	168,205,430,	0,1597,3285,
#Partially deleted in new
chr7	30752136	30892081	chr7:30752136-30892081	3	+	30752150	30766411	789624	20	168,205,217,120,236,244,410,59,107,117,89,102,64,66,68,64,162,181,73,125,	0,1597,14208,26295,29840,33612,39028,76542,84521,87063,88623,98317,100079,101257,107120,120106,123358,130044,130784,139820,
#Partially deleted in new
chr7	30752152	30791179	chr7:30752152-30791179	0	+	30752152	30778438	789624	6	152,208,120,236,244,15,	0,1578,26279,29824,33596,39012,
#Partially deleted in new
chr7	30771416	30892387	chr7:30771416-30892387	3	+	30771493	30892005	789624	18	140,120,236,244,410,59,107,117,89,102,64,66,68,64,162,181,73,431,	0,7015,10560,14332,19748,57262,65241,67783,69343,79037,80799,81977,87840,100826,104078,110764,111504,120540,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	30779535	30786644	chr7:30779535-30786644	0	+	30779535	30779535	8553170	2	2677,896,	0,6213,
#Partially deleted in new
chr7	30796690	30803410	chr7:30796690-30803410	3	-	30796690	30796690	8553170	2	204,343,	0,6377,
#Partially deleted in new
chr7	30852272	30923812	chr7:30852272-30923812	3	+	30852272	30923629	789624	11	7,66,68,64,162,181,73,301,165,81,363,	0,1121,6984,19970,23222,29908,30648,59720,69793,70291,71177,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	30857746	30892386	chr7:30857746-30892386	0	+	30857746	30857746	8553170	6	1578,64,162,181,73,430,	0,14496,17748,24434,25174,34210,
#Partially deleted in new
chr7	30911693	30925516	chr7:30911693-30925516	3	+	30911909	30923629	0	4	600,165,81,2067,	0,10372,10870,11756,
#Partially deleted in new
chr7	30913290	30923662	chr7:30913290-30923662	0	+	30913290	30913290	8553170	4	101,165,81,213,	0,8775,9273,10159,
#Deleted in new
chr7	30921299	30925516	chr7:30921299-30925516	1	+	30921703	30923629	0	5	16,158,165,81,2067,	0,381,766,1264,2150,
#Deleted in new
chr7	30921433	30924021	chr7:30921433-30924021	1	+	30921585	30923629	0	4	191,165,81,572,	0,632,1130,2016,
#Deleted in new
chr7	30921489	30923994	chr7:30921489-30923994	1	+	30921607	30923629	0	4	349,165,81,545,	0,576,1074,1960,
#Partially deleted in new
chr7	30938668	30968879	chr7:30938668-30968879	0	+	30938668	30938668	8553170	2	284,46,	0,30165,
#Partially deleted in new
chr7	30964022	30979528	chr7:30964022-30979528	3	+	30964068	30979244	0	13	103,103,108,98,98,133,154,61,70,92,130,42,410,	0,4811,5040,5844,7096,7940,9962,10406,10948,11754,12406,13258,15096,
#Partially deleted in new
chr7	30969532	30979532	chr7:30969532-30979532	0	+	30969790	30974461	789624	7	432,61,70,92,130,42,414,	0,4896,5438,6244,6896,7748,9586,
#Partially deleted in new
chr7	30969532	30979519	chr7:30969532-30979519	0	+	30969790	30974461	789624	9	432,98,133,61,70,92,130,42,401,	0,1586,2430,4896,5438,6244,6896,7748,9586,
#Partially deleted in new
chr7	30969532	30979528	chr7:30969532-30979528	1	+	30972045	30979129	789624	10	158,98,98,133,61,70,92,130,42,410,	0,334,1586,2430,4896,5438,6244,6896,7748,9586,
#Partially deleted in new
chr7	30969532	30979519	chr7:30969532-30979519	1	+	30969790	30979244	789624	10	432,98,133,154,61,70,92,130,42,401,	0,1586,2430,4452,4896,5438,6244,6896,7748,9586,
#Partially deleted in new
chr7	30970979	30974138	chr7:30970979-30974138	0	+	30970979	30970979	8553170	3	237,133,154,	0,983,3005,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	30971968	30985216	chr7:30971968-30985216	0	+	30971968	30971968	8553170	9	173,154,61,70,92,130,52,190,132,	0,2016,2460,3002,3808,4460,11600,12201,13116,
#Partially deleted in new
chr7	30971968	30984360	chr7:30971968-30984360	1	+	30972098	30984191	789624	8	173,154,61,70,92,130,52,191,	0,2016,2460,3002,3808,4460,11600,12201,
#Partially deleted in new
chr7	30972030	30975977	chr7:30972030-30975977	0	+	30972030	30972030	8553170	5	65,154,61,70,201,	0,1954,2398,2940,3746,
#Deleted in new
chr7	30976428	30979531	chr7:30976428-30979531	0	+	30976428	30976428	8553170	2	130,413,	0,2690,
#Partially deleted in new
chr7	30984080	30993254	chr7:30984080-30993254	0	+	30984080	30984080	8553170	2	279,82,	0,9092,
#Partially deleted in new
chr7	31052460	31111475	chr7:31052460-31111475	3	+	31063264	31106684	0	16	218,122,106,108,21,42,110,98,133,154,61,70,92,130,42,4980,	0,10733,12370,25530,28152,29252,31680,32276,32849,33923,34482,35166,40183,50776,52407,54035,
#Partially deleted in new
chr7	31052460	31111479	chr7:31052460-31111479	1	+	31063264	31106684	0	17	218,122,106,108,21,42,110,98,133,154,61,70,92,84,130,42,4984,	0,10733,12370,25530,28152,29252,31680,32276,32849,33923,34482,35166,40183,47666,50776,52407,54035,
#Partially deleted in new
chr7	31052526	31107006	chr7:31052526-31107006	1	+	31063264	31106684	0	14	152,122,106,108,110,98,133,154,61,70,92,130,42,511,	0,10667,12304,25464,31614,32210,32783,33857,34416,35100,40117,50710,52341,53969,
#Partially deleted in new
chr7	31056930	31078055	chr7:31056930-31078055	0	+	31063264	31078055	789624	4	173,122,106,65,	0,6263,7900,21060,
#Partially deleted in new
chr7	31063193	31106709	chr7:31063193-31106709	1	+	31063264	31106684	0	16	122,106,108,21,42,110,98,133,154,61,70,92,84,130,42,214,	0,1637,14797,17419,18519,20947,21543,22116,23190,23749,24433,29450,36933,40043,41674,43302,
#Partially deleted in new
chr7	31063238	31106844	chr7:31063238-31106844	1	+	31063264	31106684	789624	17	77,106,108,21,42,110,98,133,154,61,70,92,84,84,130,42,349,	0,1592,14752,17374,18474,20902,21498,22071,23145,23704,24388,29405,32428,36888,39998,41629,43257,
#Partially deleted in new
chr7	31086970	31104899	chr7:31086970-31104899	0	+	31086970	31104899	789624	6	33,70,92,84,130,32,	0,656,5673,8696,16266,17897,
#Deleted in new
chr7	31119283	31119572	chr7:31119283-31119572	7	-	31119283	31119283	16724991	1	289,	0,
#Deleted in new
chr7	31330710	31330896	chr7:31330710-31330896	7	+	31330710	31330710	16724991	1	186,	0,
#Deleted in new
chr7	31337460	31340894	chr7:31337460-31340894	3	-	31338254	31339268	789624	2	1829,302,	0,3132,
#Partially deleted in new
chr7	31414644	31421286	chr7:31414644-31421286	3	-	31414644	31414644	8553170	4	238,205,94,38,	0,726,2166,6604,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	31514070	31653689	chr7:31514070-31653689	1	+	31549492	31652829	789624	15	50,74,186,49,44,52,87,203,572,58,83,1272,128,112,1172,	0,35355,38931,40404,40787,55687,58031,60469,63792,69063,128105,128611,137071,137868,138447,
#Partially deleted in new
chr7	31514089	31574571	chr7:31514089-31574571	0	+	31553024	31574571	789624	7	116,186,49,44,52,87,32,	0,38912,40385,40768,55668,58012,60450,
#Partially deleted in new
chr7	31514089	31574648	chr7:31514089-31574648	0	+	31553024	31574648	789624	7	31,186,49,44,52,87,109,	0,38912,40385,40768,55668,58012,60450,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	31517363	31653689	chr7:31517363-31653689	1	+	31553024	31652829	789624	14	974,182,49,44,52,87,203,128,58,83,1272,128,112,1172,	0,35642,37111,37494,52394,54738,57176,60499,65770,124812,125318,133778,134575,135154,
#Partially deleted in new
chr7	31529461	31574618	chr7:31529461-31574618	0	+	31529461	31529461	8553170	6	362,49,44,52,87,79,	0,25013,25396,40296,42640,45078,
#Partially deleted in new
chr7	31529674	31658720	chr7:31529674-31658720	1	+	31529768	31658392	789624	15	149,186,49,44,52,87,203,572,58,83,1272,128,112,166,450,	0,23327,24800,25183,40083,42427,44865,48188,53459,112501,113007,121467,122264,122843,128596,
#Partially deleted in new
chr7	31529755	31574635	chr7:31529755-31574635	0	+	31553024	31574635	789624	7	68,186,49,44,52,87,96,	0,23246,24719,25102,40002,42346,44784,
#Partially deleted in new
chr7	31554403	31656502	chr7:31554403-31656502	1	+	31569777	31652829	789624	13	120,44,52,87,203,572,58,83,1272,128,112,322,720,	0,454,15354,17698,20136,23459,28730,87772,88278,96738,97535,98114,101379,
#Deleted in new
chr7	31554471	31555343	chr7:31554471-31555343	0	+	31554471	31554471	8553170	2	52,486,	0,386,
#Partially deleted in new
chr7	31651981	31656502	chr7:31651981-31656502	0	+	31651981	31651981	8553170	3	69,322,152,	0,536,4369,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	31686714	31708455	chr7:31686714-31708455	3	+	31692441	31707283	789624	5	592,118,153,153,1252,	0,5691,8754,10250,20489,
#Partially deleted in new
chr7	31687214	31707409	chr7:31687214-31707409	1	+	31692441	31707283	789624	4	92,118,153,206,	0,5191,9750,19989,
#Partially deleted in new
chr7	31695962	31707596	chr7:31695962-31707596	0	+	31695962	31695962	8553170	4	116,153,217,82,	0,1002,11241,11552,
#Partially deleted in new
chr7	31751178	32299329	chr7:31751178-32299329	1	-	31753383	32298735	789624	19	2375,69,78,231,176,121,82,121,102,129,101,141,117,67,183,114,172,51,679,	0,24485,57852,64745,71894,73688,77113,86001,86691,96789,99462,113763,122113,126791,127817,129568,418606,458310,547472,
#Partially deleted in new
chr7	31753017	32070849	chr7:31753017-32070849	1	-	31753383	32070393	0	18	536,69,78,231,176,121,82,121,102,129,101,141,117,67,183,114,27,557,	0,22646,56013,62906,70055,71849,75274,84162,84852,94950,97623,111924,120274,124952,125978,127729,298536,317275,
#Partially deleted in new
chr7	31753075	32071436	chr7:31753075-32071436	1	-	31753383	32070393	0	19	478,69,78,231,176,121,82,121,102,129,101,141,117,67,183,114,27,103,458,	0,22588,55955,62848,69997,71791,75216,84104,84794,94892,97565,111866,120216,124894,125920,127671,298478,317217,317903,
#Partially deleted in new
chr7	31783503	32071408	chr7:31783503-32071408	3	-	31790245	32070393	0	18	6756,78,231,176,121,82,121,102,129,101,141,117,67,183,114,27,103,203,	0,25527,32420,39569,41363,44788,53676,54366,64464,67137,81438,89788,94466,95492,97243,268050,286789,287702,
#Partially deleted in new
chr7	31790170	31820919	chr7:31790170-31820919	0	-	31790170	31790170	8553170	4	89,78,231,389,	0,18860,25753,30360,
#Partially deleted in new
chr7	31790199	32070862	chr7:31790199-32070862	1	-	31790245	32070393	0	17	60,78,231,176,121,82,121,102,129,101,141,117,67,183,114,27,570,	0,18831,25724,32873,34667,38092,46980,47670,57768,60441,74742,83092,87770,88796,90547,261354,280093,
#Deleted in new
chr7	31847863	31850902	chr7:31847863-31850902	0	-	31847863	31847863	8553170	2	233,262,	0,2777,
#Partially deleted in new
chr7	31865016	31879284	chr7:31865016-31879284	0	-	31865016	31865016	8553170	4	66,117,67,289,	0,8275,12953,13979,
#Partially deleted in new
chr7	31873331	32078010	chr7:31873331-32078010	0	-	31873331	31873331	8553170	5	77,67,183,114,141,	0,4638,5664,7415,204538,
#Partially deleted in new
chr7	31880848	32071433	chr7:31880848-32071433	0	-	31880848	32070393	789624	4	12,27,338,228,	0,170705,189444,190357,
#Deleted in new
chr7	31941260	31941583	chr7:31941260-31941583	7	+	31941260	31941260	16724991	1	323,	0,
#Deleted in new
chr7	32070483	32071371	chr7:32070483-32071371	0	-	32070483	32070483	8553170	2	147,393,	0,495,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	32427900	32431804	chr7:32427900-32431804	3	+	32427900	32427900	8553170	2	255,432,	0,3472,
#Partially deleted in new
chr7	32456962	32457758	chr7:32456962-32457758	7	-	32456962	32456962	16724991	1	796,	0,
#Deleted in new
chr7	32471512	32472409	chr7:32471512-32472409	7	+	32471512	32471512	16724991	1	897,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	32485331	32490418	chr7:32485331-32490418	3	-	32487260	32490365	0	5	1962,73,28,96,99,	0,2353,3293,3917,4988,
#Partially deleted in new
chr7	32486804	32495283	chr7:32486804-32495283	1	-	32487260	32489303	0	5	489,73,28,96,54,	0,880,1820,2444,8425,
#Partially deleted in new
chr7	32487028	32490100	chr7:32487028-32490100	1	-	32487260	32489303	0	5	265,73,28,96,76,	0,656,1596,2220,2996,
#Partially deleted in new
chr7	32487034	32490863	chr7:32487034-32490863	0	-	32490149	32490365	789624	5	259,73,28,96,839,	0,650,1590,2214,2990,
#Partially deleted in new
chr7	32487034	32490380	chr7:32487034-32490380	1	-	32487719	32490365	789624	4	259,73,111,61,	0,650,2199,3285,
#Partially deleted in new
chr7	32487034	32490361	chr7:32487034-32490361	1	-	32487260	32489303	0	5	259,73,28,96,231,	0,650,1590,2214,3096,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	32487034	32488061	chr7:32487034-32488061	0	-	32487034	32487034	8553170	2	259,377,	0,650,
#Partially deleted in new
chr7	32487039	32490380	chr7:32487039-32490380	1	-	32487260	32489303	0	6	254,73,28,96,137,61,	0,645,1585,2209,2424,3280,
#Partially deleted in new
chr7	32487062	32495249	chr7:32487062-32495249	1	-	32487260	32489303	0	5	231,73,28,96,259,	0,622,1562,2186,7928,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	32487064	32490371	chr7:32487064-32490371	0	-	32487064	32487064	8553170	3	1588,96,52,	0,2184,3255,
#Partially deleted in new
chr7	32495425	32552250	chr7:32495425-32552250	0	+	32495425	32495425	8553170	3	377,90,22,	0,55908,56803,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	32495488	32588721	chr7:32495488-32588721	3	+	32495709	32583907	789624	16	314,121,86,72,90,67,41,39,70,536,135,220,118,54,89,4930,	0,47652,49205,53358,55845,56740,58238,59069,63070,63440,74531,77710,80466,84730,85313,88303,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	32495520	32539269	chr7:32495520-32539269	0	+	32495520	32495520	8553170	2	282,7655,	0,36094,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	32495525	32586166	chr7:32495525-32586166	1	+	32495709	32583907	789624	15	277,121,86,72,90,67,41,39,70,536,135,220,118,89,2375,	0,47615,49168,53321,55808,56703,58201,59032,63033,63403,74494,77673,80429,85276,88266,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	32543254	32588711	chr7:32543254-32588711	0	+	32543254	32584046	789624	13	7,86,72,90,67,41,39,70,536,135,220,89,4920,	0,1439,5592,8079,8974,10472,11303,15304,15674,26765,29944,37547,40537,
#Partially deleted in new
chr7	32580206	32584167	chr7:32580206-32584167	0	+	32580206	32580206	8553170	3	66,89,376,	0,595,3585,
#Partially deleted in new
chr7	32580762	32584206	chr7:32580762-32584206	0	+	32580762	32580762	8553170	2	128,415,	0,3029,
#Partially deleted in new
chr7	32580790	32586108	chr7:32580790-32586108	0	+	32580790	32580790	8553170	4	100,311,83,183,	0,3001,4662,5135,
#Deleted in new
chr7	32728568	32729011	chr7:32728568-32729011	5	+	32728568	32728568	16724991	1	443,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	32728837	32753744	chr7:32728837-32753744	7	+	32728837	32728837	16724991	2	172,539,	0,24368,
#Deleted in new
chr7	32732980	32733077	chr7:32732980-32733077	3	+	32732980	32732980	5263520	1	97,	0,
#Deleted in new
chr7	32732980	32733077	chr7:32732980-32733077	3	-	32732980	32732980	5263520	1	97,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	32758881	32759353	chr7:32758881-32759353	3	+	32758881	32758881	8553170	1	472,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	32760278	32762924	chr7:32760278-32762924	3	+	32760278	32760278	8553170	1	2646,	0,
#Deleted in new
chr7	32788333	32788442	chr7:32788333-32788442	7	+	32788333	32788333	16724991	1	109,	0,
#Deleted in new
chr7	32791813	32791946	chr7:32791813-32791946	3	+	32791813	32791813	8553170	1	133,	0,
#Partially deleted in new
chr7	32812756	32838570	chr7:32812756-32838570	7	+	32812756	32812756	16724991	9	102,72,50,25,120,172,99,118,157,	0,2191,4501,7960,8717,10293,13404,14643,25657,
#Deleted in new
chr7	32845393	32846061	chr7:32845393-32846061	3	+	32845393	32845393	8553170	1	668,	0,
#Partially deleted in new
chr7	32868171	32891897	chr7:32868171-32891897	3	-	32869344	32879604	789624	4	2709,166,508,362,	0,6820,11263,23364,
#Partially deleted in new
chr7	32870086	32879672	chr7:32870086-32879672	1	-	32870209	32879604	789624	4	144,648,166,238,	0,146,4905,9348,
#Partially deleted in new
chr7	32870807	32892144	chr7:32870807-32892144	0	-	32870807	32870807	8553170	4	73,166,242,56,	0,4184,8893,21281,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	32874521	32879493	chr7:32874521-32879493	0	-	32874521	32874521	8553170	2	636,59,	0,4913,
#Partially deleted in new
chr7	32879461	32892144	chr7:32879461-32892144	0	-	32879461	32879604	789624	2	481,56,	0,12627,
#Partially deleted in new
chr7	32879515	32894131	chr7:32879515-32894131	0	-	32879515	32879604	789624	2	427,297,	0,14319,
#Partially deleted in new
chr7	32879563	32891153	chr7:32879563-32891153	0	-	32879563	32879604	789624	2	379,177,	0,11413,
#Partially deleted in new
chr7	32879591	32892733	chr7:32879591-32892733	0	-	32879591	32879604	8553170	2	351,242,	0,12900,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	32916814	32943176	chr7:32916814-32943176	7	-	32916814	32916814	16724991	6	728,62,92,31,83,307,	0,1496,4524,13263,16999,26055,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	32916814	32943038	chr7:32916814-32943038	5	-	32916814	32916814	16724991	6	728,62,92,130,31,169,	0,1496,4524,11747,13263,26055,
#Deleted in new
chr7	32951425	32951656	chr7:32951425-32951656	7	+	32951425	32951425	16724991	1	231,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	32957403	33006930	chr7:32957403-33006930	1	+	32957573	33005351	789624	11	391,159,146,190,146,190,146,187,146,164,1756,	0,6140,17213,17778,18950,22960,31103,38759,42711,45272,47771,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	32957404	33006931	chr7:32957404-33006931	3	+	32957573	33005351	789624	10	390,146,190,146,190,146,187,146,164,1757,	0,17212,17777,18949,22959,31102,38758,42710,45271,47770,
#Partially deleted in new
chr7	32957424	32976504	chr7:32957424-32976504	0	+	32957424	32957424	8553170	3	370,190,151,	0,17757,18929,
#Partially deleted in new
chr7	32957437	32989026	chr7:32957437-32989026	0	+	32957437	32957437	8553170	6	357,146,190,146,190,520,	0,17179,17744,18916,22926,31069,
#Partially deleted in new
chr7	32957440	32974644	chr7:32957440-32974644	0	+	32957440	32957440	8553170	3	354,159,28,	0,6103,17176,
#Partially deleted in new
chr7	32974594	32976405	chr7:32974594-32976405	0	+	32974594	32974594	8553170	2	777,52,	0,1759,
#Partially deleted in new
chr7	32976407	32993074	chr7:32976407-32993074	0	+	32976407	32976407	8553170	4	92,190,146,353,	0,3956,12099,16314,
#Partially deleted in new
chr7	32979473	33000261	chr7:32979473-33000261	0	+	32979576	33000261	789624	5	110,190,146,187,147,	0,890,9033,16689,20641,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	32979473	33006930	chr7:32979473-33006930	1	+	32979576	33005351	789624	7	110,190,146,187,146,164,1756,	0,890,9033,16689,20641,23202,25701,
#Partially deleted in new
chr7	32988585	33002928	chr7:32988585-33002928	0	+	32988585	32988585	8553170	4	67,187,146,253,	0,7577,11529,14090,
#Partially deleted in new
chr7	32998538	33005371	chr7:32998538-33005371	0	+	32998538	32998538	8553170	4	60,146,164,197,	0,1576,4137,6636,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	33001949	33002054	chr7:33001949-33002054	3	-	33001949	33001949	8553170	1	105,	0,
#Partially deleted in new
chr7	33002761	33005609	chr7:33002761-33005609	0	+	33002761	33002761	8553170	2	156,435,	0,2413,
#Partially deleted in new
chr7	33014112	33062796	chr7:33014112-33062796	1	-	33014729	33062705	789624	9	719,201,163,90,86,47,70,99,229,	0,1557,3326,5522,7159,7940,9926,12704,48455,
#Partially deleted in new
chr7	33014113	33041165	chr7:33014113-33041165	1	-	33014729	33026915	0	11	718,201,163,90,86,47,70,99,86,55,294,	0,1556,3325,5521,7158,7939,9925,12703,15515,21820,26758,
#Partially deleted in new
chr7	33014113	33062797	chr7:33014113-33062797	3	-	33014729	33035969	0	10	718,201,163,90,86,47,70,99,55,230,	0,1556,3325,5521,7158,7939,9925,12703,21820,48454,
#Partially deleted in new
chr7	33014113	33062797	chr7:33014113-33062797	1	-	33014729	33062720	0	9	718,201,163,90,86,47,70,99,230,	0,1556,3325,5521,7158,7939,9925,12703,48454,
#Partially deleted in new
chr7	33014129	33062796	chr7:33014129-33062796	0	-	33035976	33062720	789624	10	702,201,163,90,86,47,70,99,55,229,	0,1540,3309,5505,7142,7923,9909,12687,21804,48438,
#Partially deleted in new
chr7	33014129	33062776	chr7:33014129-33062776	1	-	33014729	33062705	789624	9	702,201,163,90,86,47,70,99,209,	0,1540,3309,5505,7142,7923,9909,12687,48438,
#Partially deleted in new
chr7	33014129	33040900	chr7:33014129-33040900	1	-	33014729	33035969	0	10	702,201,163,90,86,47,70,99,55,29,	0,1540,3309,5505,7142,7923,9909,12687,21804,26742,
#Partially deleted in new
chr7	33014138	33041165	chr7:33014138-33041165	1	-	33014729	33035969	0	10	693,201,163,90,86,47,70,99,55,294,	0,1531,3300,5496,7133,7914,9900,12678,21795,26733,
#Partially deleted in new
chr7	33014450	33040909	chr7:33014450-33040909	1	-	33014729	33026915	0	11	381,201,163,90,86,47,70,99,81,55,38,	0,1219,2988,5184,6821,7602,9588,12366,15178,21483,26421,
#Partially deleted in new
chr7	33014719	33015926	chr7:33014719-33015926	0	-	33014719	33014719	8553170	2	112,257,	0,950,
#Partially deleted in new
chr7	33017203	33035983	chr7:33017203-33035983	1	-	33017411	33035969	789624	7	398,90,86,47,70,99,50,	0,2431,4068,4849,6835,9613,18730,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	33021824	33027033	chr7:33021824-33027033	0	-	33021824	33021824	8553170	3	275,70,217,	0,2214,4992,
#Partially deleted in new
chr7	33023718	33040907	chr7:33023718-33040907	0	-	33023718	33023718	8553170	4	390,99,55,36,	0,3098,12215,17153,
#Partially deleted in new
chr7	33024080	33040909	chr7:33024080-33040909	0	-	33024080	33026915	789624	5	28,99,86,55,38,	0,2736,5548,11853,16791,
#Partially deleted in new
chr7	33029230	33040910	chr7:33029230-33040910	0	-	33029230	33029230	8553170	3	484,55,39,	0,6703,11641,
#Deleted in new
chr7	33036211	33036382	chr7:33036211-33036382	7	-	33036211	33036211	16724991	1	171,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	33045797	33046090	chr7:33045797-33046090	3	-	33045797	33045797	8553170	1	293,	0,
#Partially deleted in new
chr7	33094796	33109390	chr7:33094796-33109390	3	-	33095233	33109372	789624	6	636,62,92,130,31,170,	0,1696,2474,4510,5734,14424,
#Partially deleted in new
chr7	33095298	33100886	chr7:33095298-33100886	0	-	33095298	33100756	789624	6	134,62,92,130,31,180,	0,1194,1972,4008,5232,5408,
#Partially deleted in new
chr7	33099113	33109401	chr7:33099113-33109401	0	-	33099113	33099113	8553170	3	323,31,181,	0,1417,10107,
#Partially deleted in new
chr7	33100137	33109328	chr7:33100137-33109328	0	-	33100137	33100137	8553170	2	424,108,	0,9083,
#Deleted in new
chr7	33128987	33129143	chr7:33128987-33129143	7	-	33128987	33128987	16724991	1	156,	0,
#Partially deleted in new
chr7	33129243	33155667	chr7:33129243-33155667	0	+	33146252	33155667	789624	4	309,123,151,30,	0,16998,23457,26394,
#Partially deleted in new
chr7	33129531	33606068	chr7:33129531-33606068	1	+	33146252	33605226	0	23	510,123,151,65,114,175,85,184,130,182,77,54,103,105,15,141,96,173,153,183,223,111,874,	0,16710,23169,26106,47946,127704,134758,143480,144295,206909,211365,215049,219536,221687,223327,228323,238235,254134,258460,375931,404422,475333,475663,
#Partially deleted in new
chr7	33129539	33606068	chr7:33129539-33606068	1	+	33146252	33605226	0	21	502,123,151,65,114,175,85,184,130,182,77,54,103,141,96,173,153,183,223,111,874,	0,16702,23161,26098,47938,127696,134750,143472,144287,206901,211357,215041,219528,228315,238227,254126,258452,375923,404414,475325,475655,
#Partially deleted in new
chr7	33129539	33606068	chr7:33129539-33606068	3	+	33146252	33605226	0	22	502,123,151,65,114,175,85,184,130,182,77,54,103,105,141,96,173,153,183,223,111,874,	0,16702,23161,26098,47938,127696,134750,143472,144287,206901,211357,215041,219528,221679,228315,238227,254126,258452,375923,404414,475325,475655,
#Partially deleted in new
chr7	33129539	33606068	chr7:33129539-33606068	1	+	33146252	33605226	0	22	502,123,151,65,114,175,85,184,130,182,77,54,103,15,141,96,173,153,183,223,111,874,	0,16702,23161,26098,47938,127696,134750,143472,144287,206901,211357,215041,219528,223319,228315,238227,254126,258452,375923,404414,475325,475655,
#Partially deleted in new
chr7	33129556	33177575	chr7:33129556-33177575	0	+	33129556	33129556	8553170	5	125,96,151,65,98,	0,16712,23144,26081,47921,
#Partially deleted in new
chr7	33129561	33605632	chr7:33129561-33605632	0	+	33146252	33346280	789624	24	480,123,151,65,114,175,85,184,130,182,77,54,144,103,105,15,141,96,173,153,183,223,111,438,	0,16680,23139,26076,47916,127674,134728,143450,144265,206879,211335,215019,216665,219506,221657,223297,228293,238205,254104,258430,375901,404392,475303,475633,
#Partially deleted in new
chr7	33129566	33152836	chr7:33129566-33152836	0	+	33129566	33129566	8553170	3	475,96,136,	0,16702,23134,
#Partially deleted in new
chr7	33146328	33314571	chr7:33146328-33314571	1	+	33152723	33314311	0	9	36,151,65,114,175,85,184,130,312,	0,6372,9309,31149,110907,117961,126683,127498,167931,
#Partially deleted in new
chr7	33157637	33273114	chr7:33157637-33273114	0	+	33177515	33273114	789624	5	119,114,175,85,103,	0,19840,99598,106652,115374,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	33177739	33177838	chr7:33177739-33177838	7	+	33177739	33177739	16724991	1	99,	0,
#Deleted in new
chr7	33276833	33277091	chr7:33276833-33277091	7	-	33276833	33276833	16724991	1	258,	0,
#Partially deleted in new
chr7	33344606	33605626	chr7:33344606-33605626	0	+	33344606	33605007	789624	11	28,103,105,15,141,96,173,153,183,223,762,	0,4461,6612,8252,13248,23160,39059,43385,160856,189347,260258,
#Deleted in new
chr7	33379963	33380886	chr7:33379963-33380886	7	+	33379963	33379963	16724991	1	923,	0,
#Partially deleted in new
chr7	33383753	33390648	chr7:33383753-33390648	0	+	33383753	33383753	8553170	3	85,153,412,	0,4238,6483,
#Partially deleted in new
chr7	33505581	33534370	chr7:33505581-33534370	0	+	33505581	33505581	8553170	2	64,417,	0,28372,
#Partially deleted in new
chr7	33505587	33604952	chr7:33505587-33604952	0	+	33505587	33505587	8553170	3	148,223,88,	0,28366,99277,
#Partially deleted in new
chr7	33533686	33605207	chr7:33533686-33605207	0	+	33533686	33533686	8553170	3	490,111,13,	0,71178,71508,
#Partially deleted in new
chr7	33725980	33728456	chr7:33725980-33728456	3	+	33725980	33725980	8553170	2	129,929,	0,1547,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	33730291	33732064	chr7:33730291-33732064	3	-	33730291	33730291	8553170	2	327,250,	0,1523,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	33793167	33803130	chr7:33793167-33803130	3	-	33793167	33793167	8553170	2	1380,209,	0,9754,
#Partially deleted in new
chr7	33868500	33874231	chr7:33868500-33874231	3	-	33868500	33868500	8553170	3	139,126,115,	0,874,5616,
#Partially deleted in new
chr7	33904307	34046374	chr7:33904307-34046374	0	+	33904307	33904307	8553170	6	235,86,83,91,83,69,	0,2510,62171,66021,70394,141998,
#Partially deleted in new
chr7	33904910	34155872	chr7:33904910-34155872	3	+	33905613	34153273	789624	16	234,273,86,100,83,91,83,100,110,141,105,46,330,337,131,2781,	0,563,1907,32378,61568,65418,69791,141395,146950,150252,153148,157091,173946,180845,238319,248181,
#Partially deleted in new
chr7	33904910	33922028	chr7:33904910-33922028	0	+	33904910	33904910	8553170	4	234,273,86,251,	0,563,1907,16867,
#Partially deleted in new
chr7	33905502	33937560	chr7:33905502-33937560	0	+	33905502	33905502	8553170	3	244,86,272,	0,1315,31786,
#Partially deleted in new
chr7	33905521	34154451	chr7:33905521-34154451	0	+	33905613	34058107	8553170	14	225,86,100,83,91,83,110,141,105,46,202,337,131,1360,	0,1296,31767,60957,64807,69180,146339,149641,152537,156480,173463,180234,237708,247570,
#Partially deleted in new
chr7	33905532	34153909	chr7:33905532-34153909	0	+	33905613	34046327	8553170	14	214,86,83,91,83,100,110,141,105,46,330,337,131,818,	0,1285,60946,64796,69169,140773,146328,149630,152526,156469,173324,180223,237697,247559,
#Partially deleted in new
chr7	33905538	33966561	chr7:33905538-33966561	0	+	33905613	33966491	789624	5	208,86,100,70,83,	0,1279,31750,34413,60940,
#Partially deleted in new
chr7	33905538	34154525	chr7:33905538-34154525	1	+	33905613	34153273	8553170	13	208,86,100,83,91,83,100,110,141,202,337,131,1434,	0,1279,31750,60940,64790,69163,140767,146322,149624,173446,180217,237691,247553,
#Partially deleted in new
chr7	33905538	34154470	chr7:33905538-34154470	0	+	33905613	34078905	8553170	12	208,86,100,83,91,83,110,141,330,337,131,1379,	0,1279,31750,60940,64790,69163,146322,149624,173318,180217,237691,247553,
#Partially deleted in new
chr7	33905538	34154500	chr7:33905538-34154500	1	+	33905613	34153273	789624	15	208,86,100,83,91,83,100,110,141,105,46,330,337,131,1409,	0,1279,31750,60940,64790,69163,140767,146322,149624,152520,156463,173318,180217,237691,247553,
#Partially deleted in new
chr7	33905538	34154458	chr7:33905538-34154458	1	+	33905613	34153273	8553170	14	208,86,100,83,91,83,100,110,141,46,330,337,131,1367,	0,1279,31750,60940,64790,69163,140767,146322,149624,156463,173318,180217,237691,247553,
#Partially deleted in new
chr7	33905544	34154406	chr7:33905544-34154406	1	+	33905613	34153273	8553170	14	202,86,100,83,91,83,100,110,141,105,46,337,131,1315,	0,1273,31744,60934,64784,69157,140761,146316,149618,152514,156457,180211,237685,247547,
#Partially deleted in new
chr7	33905557	34154460	chr7:33905557-34154460	0	+	33905613	34078949	8553170	10	189,86,100,83,91,83,330,337,131,1369,	0,1260,31731,60921,64771,69144,173299,180198,237672,247534,
#Partially deleted in new
chr7	33905562	34154400	chr7:33905562-34154400	0	+	33905613	34046327	8553170	13	184,86,83,91,83,100,110,141,105,46,330,337,1309,	0,1255,60916,64766,69139,140743,146298,149600,152496,156439,173294,180193,247529,
#Partially deleted in new
chr7	33905583	34154465	chr7:33905583-34154465	1	+	33905613	34153273	8553170	14	163,86,100,83,91,83,100,110,141,105,202,337,131,1374,	0,1234,31705,60895,64745,69118,140722,146277,149579,152475,173401,180172,237646,247508,
#Partially deleted in new
chr7	33905585	34156347	chr7:33905585-34156347	0	+	33905613	34051879	8553170	12	161,86,83,91,83,110,141,105,202,337,131,3256,	0,1232,60893,64743,69116,146275,149577,152473,173399,180170,237644,247506,
#Partially deleted in new
chr7	33905670	34154682	chr7:33905670-34154682	0	+	33905670	34051879	8553170	13	76,86,83,91,83,110,141,105,46,330,337,131,1591,	0,1147,60808,64658,69031,146190,149492,152388,156331,173186,180085,237559,247421,
#Partially deleted in new
chr7	33905816	34154475	chr7:33905816-34154475	1	+	33906888	34153104	8553170	14	137,86,100,83,91,83,100,110,141,105,46,330,337,1384,	0,1001,31472,60662,64512,68885,140489,146044,149346,152242,156185,173040,179939,247275,
#Partially deleted in new
chr7	33905896	34154489	chr7:33905896-34154489	0	+	33906888	34046327	8553170	14	57,86,83,91,83,100,110,141,105,46,330,337,131,1398,	0,921,60582,64432,68805,140409,145964,149266,152162,156105,172960,179859,237333,247195,
#Partially deleted in new
chr7	33905905	34154476	chr7:33905905-34154476	0	+	33906888	34058107	8553170	12	998,100,83,91,83,110,141,105,46,337,131,1385,	0,31383,60573,64423,68796,145955,149257,152153,156096,179850,237324,247186,
#Partially deleted in new
chr7	33905909	34154525	chr7:33905909-34154525	0	+	33906888	33977084	8553170	15	44,86,100,83,91,83,118,110,141,105,46,330,337,131,1434,	0,908,31379,60569,64419,68792,71088,145951,149253,152149,156092,172947,179846,237320,247182,
#Partially deleted in new
chr7	33906246	34154019	chr7:33906246-34154019	0	+	33906888	34085858	8553170	14	657,100,83,91,83,100,110,141,105,46,202,337,131,928,	0,31042,60232,64082,68455,140059,145614,148916,151812,155755,172738,179509,236983,246845,
#Partially deleted in new
chr7	33906881	34156356	chr7:33906881-34156356	0	+	33906881	34153273	8553170	12	22,100,83,91,83,141,105,46,330,337,131,3265,	0,30407,59597,63447,67820,148281,151177,155120,171975,178874,236348,246210,
#Partially deleted in new
chr7	33977086	34154489	chr7:33977086-34154489	0	+	33977086	33977086	8553170	8	29,100,110,141,330,337,131,1398,	0,69219,74774,78076,101770,108669,166143,176005,
#Partially deleted in new
chr7	34019854	34154486	chr7:34019854-34154486	0	+	34019854	34019854	8553170	9	76,100,110,141,46,330,337,131,1395,	0,26451,32006,35308,42147,59002,65901,123375,133237,
#Partially deleted in new
chr7	34042675	34055209	chr7:34042675-34055209	0	+	34042675	34042675	8553170	4	294,100,110,47,	0,3630,9185,12487,
#Partially deleted in new
chr7	34067231	34153098	chr7:34067231-34153098	0	+	34067231	34067231	8553170	4	70,337,131,7,	0,18524,75998,85860,
#Partially deleted in new
chr7	34209525	34256343	chr7:34209525-34256343	3	+	34209525	34209525	8553170	2	93,417,	0,46401,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	34297495	34297598	chr7:34297495-34297598	3	-	34297495	34297495	8553170	1	103,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	34346511	34758234	chr7:34346511-34758234	3	-	34346511	34346511	789624	5	4336,94,150,80,161,	0,71067,223200,382225,411562,
#Partially deleted in new
chr7	34350421	34761191	chr7:34350421-34761191	0	-	34350421	34350421	8553170	5	426,94,150,80,80,	0,67157,219290,378315,410690,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	34566722	34758272	chr7:34566722-34758272	1	-	34566722	34566722	8553170	6	90,71,150,120,80,199,	0,358,2989,137357,162014,191351,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	34568251	34758272	chr7:34568251-34758272	0	-	34568251	34568251	8553170	4	121,150,80,199,	0,1460,160485,189822,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	34658238	34779840	chr7:34658238-34779840	1	+	34658412	34779590	789624	4	321,133,104,298,	0,26313,120223,121304,
#Partially deleted in new
chr7	34658284	34878332	chr7:34658284-34878332	1	+	34658412	34878184	789624	9	275,133,104,94,202,77,87,181,257,	0,26267,120177,153485,169116,176099,186611,190198,219791,
#Partially deleted in new
chr7	34658284	34849978	chr7:34658284-34849978	3	+	34658412	34849655	789624	9	275,133,104,94,202,77,87,181,414,	0,26267,120177,153485,169116,176099,186611,190198,191280,
#Partially deleted in new
chr7	34658284	34849978	chr7:34658284-34849978	1	+	34658412	34849655	789624	7	275,133,202,77,87,181,414,	0,26267,169116,176099,186611,190198,191280,
#Partially deleted in new
chr7	34658284	34849978	chr7:34658284-34849978	0	+	34658412	34827503	789624	8	275,133,94,202,77,87,181,414,	0,26267,153485,169116,176099,186611,190198,191280,
#Partially deleted in new
chr7	34658284	34849978	chr7:34658284-34849978	0	+	34658412	34827427	789624	8	275,133,104,202,77,87,181,414,	0,26267,120177,169116,176099,186611,190198,191280,
#Partially deleted in new
chr7	34658284	34686156	chr7:34658284-34686156	1	+	34658412	34685755	789624	3	275,133,406,	0,26267,27466,
#Partially deleted in new
chr7	34658284	34878332	chr7:34658284-34878332	1	+	34658412	34878184	789624	9	275,133,71,94,202,77,87,181,257,	0,26267,120210,153485,169116,176099,186611,190198,219791,
#Partially deleted in new
chr7	34658408	34849668	chr7:34658408-34849668	1	+	34658412	34849612	789624	10	151,133,104,94,202,77,87,181,100,104,	0,26143,120053,153361,168992,175975,186487,190074,190914,191156,
#Partially deleted in new
chr7	34703849	34761191	chr7:34703849-34761191	0	-	34703849	34703849	8553170	3	350,80,80,	0,24887,57262,
#Deleted in new
chr7	34710756	34711480	chr7:34710756-34711480	7	+	34710756	34710756	16724991	1	724,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	34718861	34834328	chr7:34718861-34834328	1	-	34718861	34718861	789624	5	947,112,80,99,168,	0,4422,9875,49480,115299,
#Partially deleted in new
chr7	34750252	34752053	chr7:34750252-34752053	7	-	34750252	34750252	16724991	1	1801,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	34753423	34753719	chr7:34753423-34753719	3	+	34753423	34753423	8553170	1	296,	0,
#Deleted in new
chr7	34892416	34892549	chr7:34892416-34892549	3	+	34892416	34892416	8553170	1	133,	0,
#Partially deleted in new
chr7	34928875	35038041	chr7:34928875-35038041	1	-	34931572	35037896	789624	22	2854,126,100,175,120,25,50,72,102,81,60,87,78,100,92,58,94,121,138,88,25,224,	0,9118,10400,11277,12889,13739,16791,18754,20921,25822,26432,29108,38018,40557,44638,61008,81592,82454,84692,89006,89696,108942,
#Partially deleted in new
chr7	34928875	35037525	chr7:34928875-35037525	3	-	34931572	35037394	789624	22	2854,126,100,175,120,25,50,72,102,81,60,87,78,100,92,58,94,121,138,88,25,429,	0,9118,10400,11277,12889,13739,16791,18754,20921,25822,26432,29108,38018,40557,44638,61008,81592,82454,84692,89006,89696,108221,
#Partially deleted in new
chr7	34931399	34939237	chr7:34931399-34939237	1	-	34931572	34938094	789624	3	330,126,151,	0,6594,7687,
#Partially deleted in new
chr7	34931567	34939368	chr7:34931567-34939368	0	-	34931572	34939368	789624	2	162,93,	0,7708,
#Partially deleted in new
chr7	34945682	34973605	chr7:34945682-34973605	0	-	34945682	34973605	789624	8	34,72,102,81,60,78,100,92,	0,1947,4114,9015,9625,21211,23750,27831,
#Deleted in new
chr7	34954545	34955367	chr7:34954545-34955367	0	-	34954545	34954545	8553170	2	233,60,	0,762,
#Partially deleted in new
chr7	34955328	34988234	chr7:34955328-34988234	0	-	34955328	34955328	8553170	5	39,78,100,92,265,	0,11565,14104,18185,32641,
#Partially deleted in new
chr7	34973512	35000702	chr7:34973512-35000702	0	-	34973512	34973512	8553170	3	93,58,310,	0,16371,26880,
#Partially deleted in new
chr7	35010467	35038271	chr7:35010467-35038271	0	-	35010467	35010467	8553170	6	94,121,138,88,25,100,	0,862,3100,7414,8104,27704,
#Partially deleted in new
chr7	35079988	35162075	chr7:35079988-35162075	5	-	35079988	35079988	16724991	18	1752,126,100,114,120,25,47,129,72,102,81,60,87,78,100,92,187,75,	0,10331,11858,22928,24655,26055,37759,38672,39660,41518,44009,52321,61044,61893,65002,67802,70099,82012,
#Partially deleted in new
chr7	35081592	35186041	chr7:35081592-35186041	7	-	35081592	35081592	16724991	21	165,129,150,309,198,36,75,153,114,83,63,96,159,123,96,108,96,141,207,87,321,	0,8726,10220,21241,22973,24448,36136,37975,39914,42402,50714,59431,60256,63383,66197,68624,80410,83238,97422,99822,104128,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	35089843	35107734	chr7:35089843-35107734	4	-	35089843	35089843	16724991	3	2103,120,1691,	0,14800,16200,
#Partially deleted in new
chr7	35169223	35169535	chr7:35169223-35169535	7	+	35169223	35169223	16724991	1	312,	0,
#Partially deleted in new
chr7	35202429	35254147	chr7:35202429-35254147	3	-	35202429	35253620	789624	8	341,113,77,159,109,165,253,654,	0,2040,29074,38449,42519,46247,47521,51064,
#Partially deleted in new
chr7	35231499	35253631	chr7:35231499-35253631	0	-	35231499	35231499	8553170	6	81,159,109,165,253,138,	0,9379,13449,17177,18451,21994,
#Deleted in new
chr7	35258380	35259729	chr7:35258380-35259729	3	-	35258380	35258380	8553170	2	237,343,	0,1006,
#Partially deleted in new
chr7	35496020	35510263	chr7:35496020-35510263	3	-	35496020	35496020	8553170	2	532,30,	0,14213,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	35632658	35695135	chr7:35632658-35695135	3	-	35633689	35694330	0	8	1193,118,324,123,155,114,78,952,	0,1653,2476,5691,34775,37556,40542,61525,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	35633068	35695135	chr7:35633068-35695135	1	-	35633689	35694330	0	9	783,118,324,123,155,114,78,444,335,	0,1243,2066,5281,34365,37146,40132,61115,61732,
#Partially deleted in new
chr7	35634311	35668579	chr7:35634311-35668579	0	-	35634311	35634311	8553170	5	118,324,123,155,37,	0,823,4038,33122,34231,
#Partially deleted in new
chr7	35635343	35694601	chr7:35635343-35694601	0	-	35635343	35694330	789624	4	115,123,155,418,	0,3006,32090,58840,
#Partially deleted in new
chr7	35635425	35694566	chr7:35635425-35694566	0	-	35635425	35694330	789624	5	33,123,155,114,383,	0,2924,32008,34789,58758,
#Partially deleted in new
chr7	35667553	35695023	chr7:35667553-35695023	0	-	35667553	35694330	789624	3	35,414,223,	0,26630,27247,
#Deleted in new
chr7	35694274	35695571	chr7:35694274-35695571	0	-	35694274	35694330	789624	2	353,152,	0,1145,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	35695213	35699413	chr7:35695213-35699413	3	+	35695213	35695213	789624	1	4200,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	35715033	35719695	chr7:35715033-35719695	1	+	35715033	35715033	8553170	4	244,446,98,626,	0,1389,1997,4036,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	35716473	35734887	chr7:35716473-35734887	3	+	35716473	35716473	8553170	5	395,113,128,453,562,	0,5780,6249,15921,17852,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	35716485	35719712	chr7:35716485-35719712	0	+	35716485	35716485	789624	2	643,643,	0,2584,
#Partially deleted in new
chr7	35716489	35719534	chr7:35716489-35719534	0	+	35716489	35716489	789624	2	379,465,	0,2580,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	35716801	35734515	chr7:35716801-35734515	0	+	35716801	35716801	8553170	3	67,453,190,	0,15593,17524,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	35751855	35800606	chr7:35751855-35800606	3	-	35751855	35751855	789624	5	3340,95,137,117,121,	0,6323,29353,42050,48630,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	35755145	35800588	chr7:35755145-35800588	1	-	35755145	35755145	789624	6	50,85,95,137,117,103,	0,587,3033,26063,38760,45340,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	35763763	35800616	chr7:35763763-35800616	0	-	35763763	35763763	8553170	4	146,137,117,131,	0,17445,30142,36722,
#Deleted in new
chr7	35768121	35768640	chr7:35768121-35768640	7	-	35768121	35768121	16724991	1	519,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	35800931	35907105	chr7:35800931-35907105	3	+	35832890	35904293	789624	13	339,103,107,101,135,118,93,97,52,126,136,140,2852,	0,31866,62620,71734,72709,78891,81552,82959,84896,89736,97316,102144,103322,
#Partially deleted in new
chr7	35800931	35863613	chr7:35800931-35863613	0	+	35801209	35863613	789624	4	339,5,103,62,	0,30560,31866,62620,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	35800985	35907105	chr7:35800985-35907105	1	+	35801209	35904293	789624	13	285,108,107,101,135,118,93,97,52,126,136,140,2852,	0,31807,62566,71680,72655,78837,81498,82905,84842,89682,97262,102090,103268,
#Partially deleted in new
chr7	35801038	35904500	chr7:35801038-35904500	1	+	35801209	35904293	789624	12	232,107,101,135,118,93,97,52,126,136,140,247,	0,62513,71627,72602,78784,81445,82852,84789,89629,97209,102037,103215,
#Partially deleted in new
chr7	35801215	35879910	chr7:35801215-35879910	0	+	35832890	35879910	789624	6	55,97,107,101,135,88,	0,31588,62336,71450,72425,78607,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	35801217	35872733	chr7:35801217-35872733	0	+	35801217	35801217	8553170	6	53,144,103,94,107,68,	0,30135,31580,37346,62334,71448,
#Partially deleted in new
chr7	35801218	35879940	chr7:35801218-35879940	0	+	35801218	35801218	8553170	7	52,96,107,101,135,124,118,	0,31579,62333,71447,72422,78377,78604,
#Partially deleted in new
chr7	35801218	35832845	chr7:35801218-35832845	0	+	35801218	35801218	8553170	3	52,543,48,	0,30273,31579,
#Partially deleted in new
chr7	35801218	35879940	chr7:35801218-35879940	0	+	35832890	35879940	789624	7	52,144,103,107,101,135,118,	0,30134,31579,62333,71447,72422,78604,
#Partially deleted in new
chr7	35801218	35904385	chr7:35801218-35904385	0	+	35801218	35832814	789624	14	52,72,103,107,101,135,118,93,97,52,126,136,140,132,	0,30206,31579,62333,71447,72422,78604,81265,82672,84609,89449,97029,101857,103035,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	35832668	35907105	chr7:35832668-35907105	1	+	35832668	35904293	789624	13	6,103,107,101,135,118,93,97,52,126,136,140,2852,	0,129,30883,39997,40972,47154,49815,51222,53159,57999,65579,70407,71585,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	35832797	35905305	chr7:35832797-35905305	0	+	35832797	35832797	8553170	11	103,107,101,135,118,93,97,52,126,4968,1052,	0,30754,39868,40843,47025,49686,51093,53030,57870,65450,71456,
#Partially deleted in new
chr7	35846759	35872762	chr7:35846759-35872762	0	+	35846759	35846759	8553170	4	288,90,107,97,	0,1155,16792,25906,
#Partially deleted in new
chr7	35846813	35879872	chr7:35846813-35879872	0	+	35846813	35846813	8553170	6	98,90,107,101,135,50,	0,1101,16738,25852,26827,33009,
#Partially deleted in new
chr7	35846844	35882559	chr7:35846844-35882559	0	+	35846844	35846844	8553170	6	203,107,101,135,118,76,	0,16707,25821,26796,32978,35639,
#Deleted in new
chr7	35847037	35847426	chr7:35847037-35847426	7	-	35847037	35847037	16724991	1	389,	0,
#Partially deleted in new
chr7	35863551	35874118	chr7:35863551-35874118	0	+	35863551	35863551	8553170	3	107,101,478,	0,9114,10089,
#Partially deleted in new
chr7	35879915	35905305	chr7:35879915-35905305	1	+	35882541	35904293	789624	5	25,64,81,140,1052,	0,2568,18387,23160,24338,
#Partially deleted in new
chr7	35890517	35898527	chr7:35890517-35898527	0	+	35890517	35890517	8553170	2	276,280,	0,7730,
#Partially deleted in new
chr7	35890743	35903189	chr7:35890743-35903189	0	+	35890743	35903189	789624	3	50,169,114,	0,7471,12332,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	35930157	35930264	chr7:35930157-35930264	3	-	35930157	35930157	8553170	1	107,	0,
#Partially deleted in new
chr7	35933887	35934569	chr7:35933887-35934569	7	+	35933887	35933887	16724991	1	682,	0,
#Partially deleted in new
chr7	35946293	35972587	chr7:35946293-35972587	7	+	35946293	35946293	16724991	6	87,90,54,106,143,141,	0,1409,3684,11849,20093,26153,
#Deleted in new
chr7	35971146	35971567	chr7:35971146-35971567	7	-	35971146	35971146	16724991	1	421,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	36029610	36055431	chr7:36029610-36055431	3	+	36029610	36029610	8553170	4	203,119,137,23,	0,943,6241,25798,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	36064714	36066679	chr7:36064714-36066679	3	+	36064714	36064714	8553170	3	433,277,264,	0,639,1701,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	36079083	36085736	chr7:36079083-36085736	3	+	36079083	36079083	8553170	2	232,1265,	0,5388,
#Partially deleted in new
chr7	36095271	36099543	chr7:36095271-36099543	0	+	36095271	36095271	8553170	2	227,556,	0,3716,
#Partially deleted in new
chr7	36095287	36100653	chr7:36095287-36100653	0	+	36095287	36095287	789624	2	89,1666,	0,3700,
#Partially deleted in new
chr7	36095313	36100164	chr7:36095313-36100164	3	+	36095313	36095313	8553170	3	692,163,1177,	0,2161,3674,
#Deleted in new
chr7	36109023	36110872	chr7:36109023-36110872	7	-	36109023	36109023	16724991	1	1849,	0,
#Deleted in new
chr7	36146841	36148024	chr7:36146841-36148024	7	+	36146841	36146841	16724991	1	1183,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	36153148	36301543	chr7:36153148-36301543	3	+	36154324	36299206	789624	8	526,1070,52,111,135,139,195,2537,	0,984,85836,127966,131537,134490,143844,145858,
#Partially deleted in new
chr7	36153267	36299725	chr7:36153267-36299725	1	+	36154324	36299206	789624	9	407,29,982,52,111,135,139,195,719,	0,865,953,85717,127847,131418,134371,143725,145739,
#Deleted in new
chr7	36228620	36228884	chr7:36228620-36228884	7	-	36228620	36228620	16724991	1	264,	0,
#Deleted in new
chr7	36229279	36231107	chr7:36229279-36231107	3	-	36229279	36229279	8553170	2	82,375,	0,1453,
#Partially deleted in new
chr7	36281082	36297187	chr7:36281082-36297187	0	+	36281082	36281082	8553170	4	143,135,139,195,	0,3603,6556,15910,
#Partially deleted in new
chr7	36287588	36299192	chr7:36287588-36299192	0	+	36287588	36287588	8553170	3	189,195,186,	0,9404,11418,
#Deleted in new
chr7	36297143	36299725	chr7:36297143-36299725	0	+	36297143	36299206	789624	2	34,588,	0,1994,
#Deleted in new
chr7	36305630	36305904	chr7:36305630-36305904	7	+	36305630	36305630	16724991	2	107,46,	0,228,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	36319774	36320479	chr7:36319774-36320479	3	+	36319774	36319774	8553170	1	705,	0,
#Partially deleted in new
chr7	36324220	36390125	chr7:36324220-36390125	1	-	36326759	36390074	789624	7	2698,98,306,133,689,70,159,	0,6761,9635,10825,32681,59638,65746,
#Partially deleted in new
chr7	36324222	36366913	chr7:36324222-36366913	1	-	36326759	36366842	789624	6	2696,98,306,133,689,210,	0,6759,9633,10823,32679,42481,
#Partially deleted in new
chr7	36324229	36367241	chr7:36324229-36367241	1	-	36326759	36366940	789624	6	2689,98,306,133,689,326,	0,6752,9626,10816,32672,42686,
#Partially deleted in new
chr7	36326133	36367201	chr7:36326133-36367201	1	-	36326759	36366940	789624	7	785,98,306,133,144,689,286,	0,4848,7722,8912,10020,30768,40782,
#Partially deleted in new
chr7	36326495	36367269	chr7:36326495-36367269	3	-	36326759	36357315	789624	7	423,98,306,133,144,689,159,	0,4486,7360,8550,9658,30406,40615,
#Partially deleted in new
chr7	36326704	36367171	chr7:36326704-36367171	1	-	36326759	36336285	789624	6	214,98,306,133,144,61,	0,4277,7151,8341,9449,40406,
#Partially deleted in new
chr7	36333854	36367230	chr7:36333854-36367230	0	-	36333854	36333854	8553170	3	307,133,120,	0,1191,33256,
#Partially deleted in new
chr7	36333855	36368357	chr7:36333855-36368357	0	-	36333855	36333855	8553170	4	306,133,144,158,	0,1190,2298,34344,
#Partially deleted in new
chr7	36334042	36367241	chr7:36334042-36367241	0	-	36334042	36334042	8553170	3	119,133,326,	0,1003,32873,
#Partially deleted in new
chr7	36334134	36367214	chr7:36334134-36367214	0	-	36334134	36336285	789624	4	27,133,144,299,	0,911,2019,32781,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	36337666	36337778	chr7:36337666-36337778	3	-	36337666	36337666	8553170	1	112,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	36355195	36367173	chr7:36355195-36367173	1	-	36356814	36366842	789624	2	2395,470,	0,11508,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	36356367	36367201	chr7:36356367-36367201	0	-	36356367	36356367	8553170	2	1223,286,	0,10548,
#Partially deleted in new
chr7	36356944	36390086	chr7:36356944-36390086	0	-	36356944	36390074	789624	3	247,70,120,	0,26914,33022,
#Partially deleted in new
chr7	36389805	36453791	chr7:36389805-36453791	3	+	36390026	36452600	0	24	239,154,315,386,223,191,108,127,111,236,146,148,136,177,127,49,57,39,22,113,87,108,173,1315,	0,6460,9273,16375,17928,20708,21253,25952,27274,29438,30363,30791,32051,32827,34011,34739,34880,35896,36209,37110,49398,53949,59859,62671,
#Partially deleted in new
chr7	36389820	36453791	chr7:36389820-36453791	1	+	36390026	36452600	0	23	224,154,315,386,223,191,108,127,236,146,148,136,177,127,49,57,39,22,113,87,108,173,1315,	0,6445,9258,16360,17913,20693,21238,25937,29423,30348,30776,32036,32812,33996,34724,34865,35881,36194,37095,49383,53934,59844,62656,
#Partially deleted in new
chr7	36390170	36406266	chr7:36390170-36406266	0	+	36396313	36406266	789624	4	41,154,315,86,	0,6095,8908,16010,
#Partially deleted in new
chr7	36390234	36396421	chr7:36390234-36396421	0	+	36396313	36396421	789624	2	307,156,	0,6031,
#Partially deleted in new
chr7	36403492	36407842	chr7:36403492-36407842	0	+	36403492	36403492	8553170	3	74,386,109,	0,2688,4241,
#Partially deleted in new
chr7	36406401	36410666	chr7:36406401-36410666	0	+	36406401	36407774	789624	3	165,239,153,	0,1316,4112,
#Partially deleted in new
chr7	36406402	36415783	chr7:36406402-36415783	0	+	36406402	36407774	789624	5	168,223,191,108,26,	0,1331,4111,4656,9355,
#Partially deleted in new
chr7	36406532	36415885	chr7:36406532-36415885	0	+	36406532	36407774	789624	4	38,223,191,128,	0,1201,3981,9225,
#Partially deleted in new
chr7	36406550	36417148	chr7:36406550-36417148	0	+	36406550	36406550	8553170	5	16,223,191,108,69,	0,1183,3963,4508,10529,
#Partially deleted in new
chr7	36410559	36449800	chr7:36410559-36449800	0	+	36410559	36449800	789624	9	96,49,57,39,22,113,87,108,136,	0,13985,14126,15142,15455,16356,28644,33195,39105,
#Partially deleted in new
chr7	36420223	36426034	chr7:36420223-36426034	0	+	36420223	36426034	789624	9	91,133,136,177,127,49,57,39,20,	0,388,1633,2409,3593,4321,4462,5478,5791,
#Partially deleted in new
chr7	36422722	36449678	chr7:36422722-36449678	0	+	36422722	36449678	789624	11	87,127,49,57,39,22,113,54,87,108,14,	0,1094,1822,1963,2979,3292,4193,5584,16481,21032,26942,
#Deleted in new
chr7	36448938	36453655	chr7:36448938-36453655	0	+	36448938	36448938	8553170	2	899,1179,	0,3538,
#Partially deleted in new
chr7	36512948	36724549	chr7:36512948-36724549	1	-	36513251	36724148	0	20	432,77,97,60,59,173,75,37,83,92,95,49,49,71,61,71,60,100,67,528,	0,9090,17469,19198,19337,27370,35663,36490,63625,81390,103431,105348,107832,108761,110241,119087,124902,146217,160994,211073,
#Partially deleted in new
chr7	36512998	36724548	chr7:36512998-36724548	3	-	36513251	36724148	0	21	382,77,97,60,59,173,75,37,83,92,95,49,49,71,61,71,60,100,67,96,527,	0,9040,17419,19148,19287,27320,35613,36440,63575,81340,103381,105298,107782,108711,110191,119037,124852,146167,160944,173700,211023,
#Partially deleted in new
chr7	36513001	36724449	chr7:36513001-36724449	1	-	36513031	36724148	789624	22	379,119,77,97,60,59,173,75,37,83,92,95,49,49,71,61,71,60,100,67,96,428,	0,1470,9037,17416,19145,19284,27317,35610,36437,63572,81337,103378,105295,107779,108708,110188,119034,124849,146164,160941,173697,211020,
#Partially deleted in new
chr7	36513001	36514676	chr7:36513001-36514676	0	-	36513001	36513001	8553170	2	379,205,	0,1470,
#Partially deleted in new
chr7	36513002	36530684	chr7:36513002-36530684	0	-	36513002	36513002	8553170	3	378,77,267,	0,9036,17415,
#Partially deleted in new
chr7	36532329	36594656	chr7:36532329-36594656	0	-	36532329	36532329	8553170	7	15,173,75,37,83,92,68,	0,7989,16282,17109,44244,62009,62259,
#Partially deleted in new
chr7	36532333	36594553	chr7:36532333-36594553	0	-	36532333	36532333	8553170	6	11,173,75,37,83,215,	0,7985,16278,17105,44240,62005,
#Partially deleted in new
chr7	36540310	36594553	chr7:36540310-36594553	0	-	36540310	36540310	8553170	5	181,75,37,83,215,	0,8301,9128,36263,54028,
#Deleted in new
chr7	36597833	36600120	chr7:36597833-36600120	3	-	36597833	36597833	5263520	3	49,146,378,	0,327,1909,
#Partially deleted in new
chr7	36623189	36661300	chr7:36623189-36661300	0	-	36623189	36623189	8553170	5	61,71,60,100,258,	0,8846,14661,35976,37853,
#Partially deleted in new
chr7	36637878	36724500	chr7:36637878-36724500	0	-	36637878	36724148	789624	4	32,100,67,479,	0,21287,36064,86143,
#Partially deleted in new
chr7	36686780	36724474	chr7:36686780-36724474	0	-	36690148	36724148	789624	3	14,84,453,	0,3316,37241,
#Partially deleted in new
chr7	36734003	36734535	chr7:36734003-36734535	3	-	36734003	36734003	8553170	1	532,	0,
#Partially deleted in new
chr7	36750686	36763081	chr7:36750686-36763081	3	+	36750686	36750686	8553170	3	360,130,97,	0,5022,12298,
#Partially deleted in new
chr7	36781007	36782789	chr7:36781007-36782789	3	+	36781007	36781007	8553170	2	146,726,	0,1056,
#Partially deleted in new
chr7	36818958	36819690	chr7:36818958-36819690	7	+	36818958	36818958	16724991	1	732,	0,
#Partially deleted in new
chr7	36838971	36841373	chr7:36838971-36841373	3	+	36838971	36838971	8553170	2	162,391,	0,2011,
#Partially deleted in new
chr7	36854360	37449249	chr7:36854360-37449249	3	-	36855550	37342690	0	22	1391,78,83,108,113,164,137,109,105,132,123,51,79,152,100,36,170,51,73,41,151,575,	0,7298,16032,23649,33199,40493,158938,242258,278769,357025,358974,362284,368254,370518,378734,389995,404820,417471,460489,461559,488252,594314,
#Partially deleted in new
chr7	36854360	36986509	chr7:36854360-36986509	1	-	36855550	36895014	0	7	1391,78,83,108,113,164,587,	0,7298,16032,23649,33199,40493,131562,
#Partially deleted in new
chr7	36854461	36985060	chr7:36854461-36985060	1	-	36855550	36895014	0	7	1290,78,83,108,113,164,146,	0,7197,15931,23548,33098,40392,130453,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr7	36855290	37353668	chr7:36855290-37353668	1	-	36855550	37342690	0	22	461,78,83,108,113,164,137,109,105,132,123,51,79,152,100,36,170,51,73,41,151,637,	0,6368,15102,22719,32269,39563,158008,241328,277839,356095,358044,361354,367324,369588,377804,389065,403890,416541,459559,460629,487322,497741,
#Partially deleted in new
chr7	36855366	36862150	chr7:36855366-36862150	0	-	36855366	36855366	8553170	2	385,492,	0,6292,
#Partially deleted in new
chr7	36855497	36986149	chr7:36855497-36986149	0	-	36855497	36855497	8553170	4	254,78,9,227,	0,6161,39511,130425,
#Partially deleted in new
chr7	36855550	37449223	chr7:36855550-37449223	1	-	36855550	37342690	0	22	201,78,83,108,113,164,137,109,105,132,123,51,79,152,100,36,170,51,73,41,151,364,	0,6108,14842,22459,32009,39303,157748,241068,277579,355835,357784,361094,367064,369328,377544,388805,403630,416281,459299,460369,487062,593309,
#Partially deleted in new
chr7	36870392	36986116	chr7:36870392-36986116	0	-	36870392	36870392	8553170	4	83,108,164,194,	0,7617,24461,115530,
#Partially deleted in new
chr7	36894853	37216689	chr7:36894853-37216689	0	-	37033377	37216689	789624	8	164,137,66,109,105,132,123,45,	0,118445,138493,201765,238276,316532,318481,321791,
#Partially deleted in new
chr7	36894921	37197223	chr7:36894921-37197223	0	-	36894921	36894921	8553170	5	96,137,109,105,123,	0,118377,201697,238208,302179,
#Deleted in new
chr7	36919356	36919432	chr7:36919356-36919432	3	-	36919356	36919356	5263520	1	76,	0,
#Partially deleted in new
chr7	36997795	37013630	chr7:36997795-37013630	3	+	36997795	36997795	789624	3	137,110,281,	0,4276,15554,
#Partially deleted in new
chr7	37096677	37222688	chr7:37096677-37222688	0	-	37096677	37222688	789624	7	50,105,132,123,51,45,74,	0,36452,114708,116657,119967,121034,125937,
#Deleted in new
chr7	37116778	37117185	chr7:37116778-37117185	7	+	37116778	37116778	16724991	1	407,	0,
#Partially deleted in new
chr7	37133005	37224919	chr7:37133005-37224919	0	-	37133005	37133005	8553170	6	229,132,123,51,79,41,	0,78380,80329,83639,89609,91873,
#Partially deleted in new
chr7	37211084	37216698	chr7:37211084-37216698	0	-	37211319	37216698	789624	3	433,123,54,	0,2250,5560,
#Partially deleted in new
chr7	37233104	37342763	chr7:37233104-37342763	0	-	37233104	37342690	789624	6	90,170,51,73,41,151,	0,26076,38727,81745,82815,109508,
#Partially deleted in new
chr7	37244355	37343179	chr7:37244355-37343179	0	-	37244355	37342690	789624	7	36,170,51,73,41,151,128,	0,14825,27476,70494,71564,98257,98696,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	37269453	37448856	chr7:37269453-37448856	0	-	37269453	37269453	8553170	5	2429,73,41,151,182,	0,45396,46466,73159,179221,
#Partially deleted in new
chr7	37271831	37448950	chr7:37271831-37448950	0	-	37271831	37342690	789624	6	51,73,41,151,96,91,	0,43018,44088,70781,121990,177028,
#Partially deleted in new
chr7	37314864	37449186	chr7:37314864-37449186	0	-	37314864	37342690	789624	5	58,41,151,96,512,	0,1055,27748,78957,133810,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	37351142	37351242	chr7:37351142-37351242	3	+	37351142	37351142	8553170	1	100,	0,
#Deleted in new
chr7	37375521	37376023	chr7:37375521-37376023	7	+	37375521	37375521	16724991	1	502,	0,
#Deleted in new
chr7	37419627	37419767	chr7:37419627-37419767	3	+	37419627	37419627	8553170	1	140,	0,
#Partially deleted in new
chr7	37429256	37448950	chr7:37429256-37448950	0	-	37429256	37429256	8553170	2	500,91,	0,19603,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	37435114	37435216	chr7:37435114-37435216	3	+	37435114	37435114	8553170	1	102,	0,
#Partially deleted in new
chr7	37585499	37586329	chr7:37585499-37586329	7	-	37585499	37585499	16724991	1	830,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	37683795	37833788	chr7:37683795-37833788	0	+	37683795	37683795	8553170	4	108,124,218,373,	0,1664,145459,149620,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	37683796	37740705	chr7:37683796-37740705	0	+	37740393	37740705	789624	4	107,120,124,326,	0,1382,1663,56583,
#Partially deleted in new
chr7	37683842	37950412	chr7:37683842-37950412	1	+	37948876	37950396	789624	4	61,72,209,213,	0,173431,264997,266357,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	37683865	37713510	chr7:37683865-37713510	0	+	37683865	37683865	8553170	4	38,124,82,169,	0,1594,25852,29476,
#Partially deleted in new
chr7	37683871	37741374	chr7:37683871-37741374	3	+	37740393	37741311	789624	4	32,120,123,995,	0,1307,46044,56508,
#Deleted in new
chr7	37740393	37741311	chr7:37740393-37741311	1	+	37740393	37741311	789624	1	918,	0,
#Deleted in new
chr7	37796057	37796888	chr7:37796057-37796888	7	+	37796057	37796057	16724991	1	831,	0,
#Deleted in new
chr7	37821209	37821610	chr7:37821209-37821610	7	+	37821209	37821209	16724991	1	401,	0,
#Partially deleted in new
chr7	37848596	37900401	chr7:37848596-37900401	3	+	37850266	37897092	789624	18	132,233,40,58,107,72,117,67,74,93,197,176,145,108,152,145,238,158,	0,227,1663,1781,2032,8677,13431,14799,15751,16928,19105,28235,35706,36548,39680,45869,48273,51647,
#Partially deleted in new
chr7	37848609	37864405	chr7:37848609-37864405	0	+	37850266	37864405	789624	6	119,40,72,117,67,58,	0,1650,8664,13418,14786,15738,
#Partially deleted in new
chr7	37848952	37865611	chr7:37848952-37865611	0	+	37850266	37865611	789624	7	104,40,72,117,67,74,87,	0,1307,8321,13075,14443,15395,16572,
#Partially deleted in new
chr7	37849018	37897092	chr7:37849018-37897092	1	+	37850266	37897092	789624	16	105,40,58,107,72,117,67,74,93,197,176,145,108,152,145,223,	0,1241,1359,1610,8255,13009,14377,15329,16506,18683,27813,35284,36126,39258,45447,47851,
#Partially deleted in new
chr7	37850252	37888399	chr7:37850252-37888399	0	+	37850266	37884362	789624	5	47,72,145,108,123,	0,7021,34050,34892,38024,
#Partially deleted in new
chr7	37896816	37900394	chr7:37896816-37900394	0	+	37896816	37896816	8553170	2	291,151,	0,3427,
#Partially deleted in new
chr7	37905931	37916915	chr7:37905931-37916915	3	-	37907478	37916537	789624	6	1733,64,199,66,81,823,	0,3685,6187,8281,8441,10161,
#Partially deleted in new
chr7	37907261	37909839	chr7:37907261-37909839	0	-	37907261	37907261	8553170	2	403,223,	0,2355,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	37909658	38025695	chr7:37909658-38025695	0	-	37909658	37926722	789624	6	22,199,66,81,95,386,	0,2460,4554,4714,17021,115651,
#Partially deleted in new
chr7	37920560	37951941	chr7:37920560-37951941	3	+	37920939	37950396	789624	3	648,209,1742,	0,28279,29639,
#Partially deleted in new
chr7	37920657	37950286	chr7:37920657-37950286	1	+	37920939	37950203	789624	2	551,87,	0,29542,
#Partially deleted in new
chr7	37921319	37950805	chr7:37921319-37950805	1	+	37921365	37950396	789624	3	132,209,606,	0,27520,28880,
#Partially deleted in new
chr7	38178221	38230671	chr7:38178221-38230671	3	+	38207504	38228854	789624	9	199,283,78,78,54,118,96,73,749,	0,29225,36135,36806,38803,38966,41343,50577,51701,
#Partially deleted in new
chr7	38178262	38230379	chr7:38178262-38230379	1	+	38207504	38228854	789624	8	158,283,78,78,118,96,73,457,	0,29184,36094,36765,38925,41302,50536,51660,
#Partially deleted in new
chr7	38178323	38230670	chr7:38178323-38230670	0	+	38178323	38178323	8553170	7	97,283,78,2278,96,73,748,	0,29123,36033,36704,41241,50475,51599,
#Partially deleted in new
chr7	38178350	38230381	chr7:38178350-38230381	1	+	38207504	38228854	789624	10	70,56,283,78,78,54,118,96,73,459,	0,739,29096,36006,36677,38674,38837,41214,50448,51572,
#Partially deleted in new
chr7	38178375	38217305	chr7:38178375-38217305	0	+	38207504	38217305	789624	7	45,128,283,78,78,54,118,	0,23694,29071,35981,36652,38649,38812,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	38178389	38217269	chr7:38178389-38217269	0	+	38207504	38217269	789624	7	31,253,283,78,78,54,82,	0,23324,29057,35967,36638,38635,38798,
#Partially deleted in new
chr7	38178394	38219629	chr7:38178394-38219629	0	+	38207504	38219629	789624	8	26,155,283,78,78,54,118,65,	0,19816,29052,35962,36633,38630,38793,41170,
#Partially deleted in new
chr7	38239579	38249572	chr7:38239579-38249572	3	-	38240023	38249572	789624	4	587,48,48,330,	0,2848,5603,9663,
#Deleted in new
chr7	38253379	38253429	chr7:38253379-38253429	3	-	38253379	38253429	789624	1	50,	0,
#Deleted in new
chr7	38256336	38256396	chr7:38256336-38256396	3	-	38256336	38256396	789624	1	60,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	38257878	38265678	chr7:38257878-38265678	3	-	38260087	38265678	789624	3	2352,48,330,	0,4292,7470,
#Deleted in new
chr7	38269490	38269540	chr7:38269490-38269540	3	-	38269490	38269540	789624	1	50,	0,
#Deleted in new
chr7	38273586	38273647	chr7:38273586-38273647	3	-	38273586	38273647	789624	1	61,	0,
#Deleted in new
chr7	38276258	38276318	chr7:38276258-38276318	3	-	38276258	38276318	789624	1	60,	0,
#Deleted in new
chr7	38291615	38292078	chr7:38291615-38292078	3	-	38291615	38291924	789624	1	463,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	38295762	38296233	chr7:38295762-38296233	7	-	38295762	38295762	16724991	1	471,	0,
#Deleted in new
chr7	38299810	38300322	chr7:38299810-38300322	3	-	38299810	38300163	789624	1	512,	0,
#Deleted in new
chr7	38311382	38311808	chr7:38311382-38311808	7	+	38311382	38311382	16724991	1	426,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	38317016	38318861	chr7:38317016-38318861	3	-	38317016	38317492	789624	2	320,1415,	0,430,
#Deleted in new
chr7	38322445	38322730	chr7:38322445-38322730	7	-	38322445	38322445	16724991	1	285,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	38326069	38329643	chr7:38326069-38329643	3	-	38326069	38326069	8553170	2	1564,404,	0,3170,
#Deleted in new
chr7	38330342	38330935	chr7:38330342-38330935	3	-	38330342	38330821	789624	2	311,157,	0,436,
#Deleted in new
chr7	38335040	38335514	chr7:38335040-38335514	7	-	38335040	38335040	16724991	2	310,43,	0,431,
#Deleted in new
chr7	38340699	38340998	chr7:38340699-38340998	7	-	38340699	38340699	16724991	1	299,	0,
#Deleted in new
chr7	38341576	38342702	chr7:38341576-38342702	0	+	38341576	38341576	8553170	2	223,447,	0,679,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	38341614	38378804	chr7:38341614-38378804	3	+	38341614	38341614	789624	4	185,107,105,3248,	0,4406,8731,33942,
#Deleted in new
chr7	38345029	38345499	chr7:38345029-38345499	7	-	38345029	38345029	16724991	2	311,43,	0,427,
#Deleted in new
chr7	38349354	38350022	chr7:38349354-38350022	3	-	38349354	38349824	789624	2	311,241,	0,427,
#Partially deleted in new
chr7	38353714	38354517	chr7:38353714-38354517	3	-	38353714	38354183	789624	2	311,377,	0,426,
#Deleted in new
chr7	38358511	38359162	chr7:38358511-38359162	3	-	38358511	38358979	789624	2	311,226,	0,425,
#Deleted in new
chr7	38362863	38363518	chr7:38362863-38363518	3	-	38362863	38363328	789624	2	311,233,	0,422,
#Deleted in new
chr7	38367585	38368169	chr7:38367585-38368169	3	-	38367585	38368055	789624	2	308,157,	0,427,
#Partially deleted in new
chr7	38383703	38631420	chr7:38383703-38631420	1	-	38384817	38631351	0	20	1222,102,270,210,57,33,24,24,117,129,139,83,76,86,108,96,95,55,81,138,	0,6100,8044,10301,38717,43250,46138,48485,52568,77579,79271,81763,82469,91627,93158,107346,110729,119946,151227,247579,
#Partially deleted in new
chr7	38383703	38631567	chr7:38383703-38631567	3	-	38384817	38631351	0	21	1222,102,270,210,126,57,33,24,24,117,129,139,83,76,86,108,96,95,55,81,285,	0,6100,8044,10301,34121,38717,43250,46138,48485,52568,77579,79271,81763,82469,91627,93158,107346,110729,119946,151227,247579,
#Partially deleted in new
chr7	38384817	38463113	chr7:38384817-38463113	0	-	38384817	38463113	789624	12	108,102,270,210,57,33,522,24,24,117,129,139,	0,4986,6930,9187,37603,42136,44238,45024,47371,51454,76465,78157,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	38389847	38392719	chr7:38389847-38392719	0	-	38389847	38389847	8553170	3	58,270,102,	0,1900,2770,
#Partially deleted in new
chr7	38391890	38418031	chr7:38391890-38418031	0	-	38391890	38391890	8553170	3	127,210,207,	0,2114,25934,
#Partially deleted in new
chr7	38391987	38429285	chr7:38391987-38429285	0	-	38420998	38429285	789624	6	30,210,105,57,33,230,	0,2017,28924,30433,34966,37068,
#Partially deleted in new
chr7	38391987	38429285	chr7:38391987-38429285	0	-	38391987	38391987	8553170	5	30,210,57,33,536,	0,2017,30433,34966,36762,
#Partially deleted in new
chr7	38391987	38429285	chr7:38391987-38429285	0	-	38391987	38391987	8553170	5	30,210,57,33,1448,	0,2017,30433,34966,35850,
#Partially deleted in new
chr7	38394069	38430055	chr7:38394069-38430055	0	-	38394069	38394069	8553170	5	145,126,57,33,214,	0,23755,28351,32884,35772,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	38531041	38531338	chr7:38531041-38531338	3	-	38531041	38531041	8553170	1	297,	0,
#Deleted in new
chr7	38655204	38656613	chr7:38655204-38656613	7	+	38655204	38655204	16724991	1	1409,	0,
#Deleted in new
chr7	38685345	38687037	chr7:38685345-38687037	7	-	38685345	38685345	16724991	2	867,728,	0,964,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr7	38722962	38909229	chr7:38722962-38909229	3	-	38726245	38909174	789624	29	3364,80,45,100,137,141,55,138,51,42,145,128,93,82,62,57,116,130,98,67,147,120,66,63,75,78,108,39,76,	0,3946,5579,5729,19022,20439,22596,29213,31739,31932,33875,35391,40492,42617,44574,48235,49559,51152,53716,66838,72502,73782,94854,98240,107291,139582,146183,175128,186191,
#Partially deleted in new
chr7	38725554	38909174	chr7:38725554-38909174	1	-	38726245	38909174	789624	28	772,80,45,100,137,141,55,138,51,42,145,128,93,82,62,57,116,130,98,67,147,120,66,63,78,108,39,21,	0,1354,2987,3137,16430,17847,20004,26621,29147,29340,31283,32799,37900,40025,41982,45643,46967,48560,51124,64246,69910,71190,92262,95648,136990,143591,172536,183599,
#Deleted in new
chr7	38726108	38727186	chr7:38726108-38727186	0	-	38726108	38726108	8553170	2	218,278,	0,800,
#Partially deleted in new
chr7	38726235	38745581	chr7:38726235-38745581	0	-	38728429	38745581	789624	8	91,80,94,45,100,137,141,23,	0,673,2105,2306,2456,15749,17166,19323,
#Partially deleted in new
chr7	38726318	38745998	chr7:38726318-38745998	0	-	38726318	38726318	8553170	7	8,80,45,100,137,141,440,	0,590,2223,2373,15666,17083,19240,
#Deleted in new
chr7	38741283	38745562	chr7:38741283-38745562	0	-	38741307	38745562	789624	4	68,141,141,4,	0,697,2118,4275,
#Partially deleted in new
chr7	38758401	38765753	chr7:38758401-38765753	0	-	38758401	38758401	8553170	3	80,93,174,	0,5053,7178,
#Partially deleted in new
chr7	38772598	38797041	chr7:38772598-38797041	0	-	38772598	38772598	8553170	6	39,130,98,67,147,110,	0,1516,4080,17202,22866,24333,
#Partially deleted in new
chr7	38774157	38775672	chr7:38774157-38775672	0	-	38774157	38774157	8553170	2	87,484,	0,1031,
#Partially deleted in new
chr7	38795491	38831346	chr7:38795491-38831346	0	-	38795491	38831239	789624	6	120,120,66,63,75,131,	0,1253,22325,25711,34762,35724,
#Partially deleted in new
chr7	38795541	38909191	chr7:38795541-38909191	0	-	38796466	38909174	789624	10	70,112,120,66,63,75,78,108,39,38,	0,873,1203,22275,25661,34712,67003,73604,102549,113612,
#Partially deleted in new
chr7	38796744	38909191	chr7:38796744-38909191	0	-	38796744	38909174	789624	7	120,66,63,75,78,108,38,	0,21072,24458,33509,65800,72401,112409,
#Partially deleted in new
chr7	38817802	38929560	chr7:38817802-38929560	0	-	38817802	38869163	789624	7	80,63,75,78,108,39,89,	0,3400,12451,44742,51343,80288,111669,
#Partially deleted in new
chr7	38821217	38932394	chr7:38821217-38932394	0	-	38821217	38869163	789624	6	48,75,78,108,39,117,	0,9036,41327,47928,76873,111060,
#Partially deleted in new
chr7	38977997	39464791	chr7:38977997-39464791	1	+	39006849	39464686	789624	11	61,111,172,92,229,374,141,207,169,169,610,	0,28759,107862,226237,229394,361644,428602,455079,473535,482549,486184,
#Partially deleted in new
chr7	39006807	39468601	chr7:39006807-39468601	3	+	39006849	39464686	789624	10	60,172,92,229,374,141,207,169,169,4312,	0,79052,197427,200584,332834,399792,426269,444725,453739,457482,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	39013080	39373708	chr7:39013080-39373708	0	+	39013080	39013080	8553170	6	479,172,92,229,374,232,	0,72779,191154,194311,326561,360396,
#Partially deleted in new
chr7	39034334	39207540	chr7:39034334-39207540	0	+	39034470	39207540	789624	4	157,172,92,149,	0,51525,169900,173057,
#Partially deleted in new
chr7	39083560	39451701	chr7:39083560-39451701	0	+	39085865	39451701	789624	7	242,172,92,229,374,207,169,	0,2299,120674,123831,256081,349516,367972,
#Partially deleted in new
chr7	39085054	39433283	chr7:39085054-39433283	0	+	39085865	39433283	789624	7	75,172,92,229,374,141,207,	0,805,119180,122337,254587,321545,348022,
#Partially deleted in new
chr7	39085764	39465077	chr7:39085764-39465077	1	+	39085865	39464686	789624	8	267,92,229,374,207,169,169,896,	0,118470,121627,253877,347312,365768,374782,378417,
#Partially deleted in new
chr7	39085860	39132666	chr7:39085860-39132666	0	+	39085860	39085860	8553170	3	171,70,289,	0,34972,46517,
#Deleted in new
chr7	39329002	39329134	chr7:39329002-39329134	3	-	39329002	39329002	5263520	1	132,	0,
#Deleted in new
chr7	39404597	39406346	chr7:39404597-39406346	3	-	39404597	39404597	789624	4	186,79,103,13,	0,329,1419,1736,
#Partially deleted in new
chr7	39406617	39464710	chr7:39406617-39464710	0	+	39406617	39460645	789624	4	123,207,169,529,	0,26459,53929,57564,
#Partially deleted in new
chr7	39465091	39493095	chr7:39465091-39493095	0	+	39465091	39465091	8553170	4	85,155,240,52,	0,5996,25278,27952,
#Partially deleted in new
chr7	39545645	39566239	chr7:39545645-39566239	3	-	39545645	39545645	8553170	3	248,69,97,	0,8230,20497,
#Partially deleted in new
chr7	39566375	39572881	chr7:39566375-39572881	3	+	39566418	39572706	789624	3	172,122,605,	0,4130,5901,
#Partially deleted in new
chr7	39566384	39571002	chr7:39566384-39571002	0	+	39566384	39566384	8553170	2	163,497,	0,4121,
#Partially deleted in new
chr7	39566393	39572502	chr7:39566393-39572502	1	+	39566418	39572366	789624	3	154,122,149,	0,4112,5960,
#Partially deleted in new
chr7	39566405	39610320	chr7:39566405-39610320	1	+	39566418	39609986	789624	3	142,122,704,	0,4100,43211,
#Partially deleted in new
chr7	39566692	39570580	chr7:39566692-39570580	0	+	39566692	39566692	8553170	2	339,75,	0,3813,
#Deleted in new
chr7	39569375	39570198	chr7:39569375-39570198	7	-	39569375	39569375	16724991	1	823,	0,
#Partially deleted in new
chr7	39570253	39572572	chr7:39570253-39572572	0	+	39570253	39570253	8553170	2	374,296,	0,2023,
#Deleted in new
chr7	39609609	39610290	chr7:39609609-39610290	3	-	39609609	39609609	8553170	2	286,279,	0,402,
#Deleted in new
chr7	39609716	39610280	chr7:39609716-39610280	7	+	39609716	39609716	16724991	1	564,	0,
#Partially deleted in new
chr7	39623482	39708124	chr7:39623482-39708124	3	+	39686667	39706245	0	5	343,151,209,175,2002,	0,63148,66899,73202,82640,
#Partially deleted in new
chr7	39623564	39706391	chr7:39623564-39706391	0	+	39623564	39623564	8553170	3	261,175,269,	0,73120,82558,
#Partially deleted in new
chr7	39623885	39690570	chr7:39623885-39690570	0	+	39686667	39690570	789624	3	542,151,189,	0,62745,66496,
#Partially deleted in new
chr7	39686686	39706308	chr7:39686686-39706308	0	+	39686686	39697422	789624	5	95,209,175,103,186,	0,3695,9998,10721,19436,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	39700340	39703296	chr7:39700340-39703296	3	-	39700340	39700340	8553170	2	414,317,	0,2639,
#Partially deleted in new
chr7	39700879	39706302	chr7:39700879-39706302	0	+	39700879	39700879	8553170	2	140,180,	0,5243,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	39733631	39793092	chr7:39733631-39793092	3	+	39733631	39733631	789624	12	413,267,87,115,122,117,142,65,123,191,58,1349,	0,33772,37373,45639,46871,47603,48112,49103,54850,55722,57962,58112,
#Partially deleted in new
chr7	39768340	39768444	chr7:39768340-39768444	3	+	39768340	39768340	8553170	1	104,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	39781688	39789425	chr7:39781688-39789425	1	+	39781688	39781688	8553170	4	208,65,123,72,	0,1046,6793,7665,
#Deleted in new
chr7	39788966	39789304	chr7:39788966-39789304	7	-	39788966	39788966	16724991	1	338,	0,
#Deleted in new
chr7	39796592	39797911	chr7:39796592-39797911	7	-	39796592	39796592	16724991	1	1319,	0,
#Partially deleted in new
chr7	39816548	39868140	chr7:39816548-39868140	7	+	39816548	39816548	16724991	5	144,158,154,120,195,	0,270,20209,49763,51397,
#Deleted in new
chr7	39833285	39833793	chr7:39833285-39833793	7	-	39833285	39833285	16724991	1	508,	0,
#Deleted in new
chr7	39833570	39834718	chr7:39833570-39834718	7	+	39833570	39833570	16724991	1	1148,	0,
#Deleted in new
chr7	39854493	39855056	chr7:39854493-39855056	7	-	39854493	39854493	16724991	1	563,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	39888374	39888664	chr7:39888374-39888664	3	+	39888374	39888374	8553170	1	290,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	39947521	39949755	chr7:39947521-39949755	3	-	39947521	39947521	8553170	1	2234,	0,
#Partially deleted in new
chr7	39949645	40099580	chr7:39949645-40099580	3	+	39950641	40094980	0	14	2207,660,171,140,171,190,57,102,78,117,132,206,453,5451,	0,37953,47848,49715,52215,96190,98175,113180,113377,128359,129074,138480,143139,144484,
#Partially deleted in new
chr7	39950120	40095555	chr7:39950120-40095555	1	+	39950641	40094980	0	14	1732,660,171,140,171,190,57,102,78,117,132,206,273,1426,	0,37478,47373,49240,51740,95715,97700,112705,112902,127884,128599,138005,142844,144009,
#Partially deleted in new
chr7	39950359	40069346	chr7:39950359-40069346	1	+	39988229	40069346	789624	10	1493,660,171,140,171,190,57,102,78,37,	0,37239,47134,49001,51501,95476,97461,112466,112663,118950,
#Partially deleted in new
chr7	39951017	39952918	chr7:39951017-39952918	0	+	39951017	39951856	789624	1	1901,	0,
#Partially deleted in new
chr7	39951712	40093023	chr7:39951712-40093023	1	+	39988229	40088196	789624	14	140,660,171,140,171,190,57,102,78,117,115,16,206,59,	0,35886,45781,47648,50148,94123,96108,111113,111310,126292,127007,127123,136413,141252,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	39984104	40002031	chr7:39984104-40002031	0	+	39984104	39984104	8553170	5	3048,660,171,140,171,	0,3494,13389,15256,17756,
#Partially deleted in new
chr7	39987598	39997983	chr7:39987598-39997983	0	+	39987598	39997698	789624	2	660,490,	0,9895,
#Partially deleted in new
chr7	39987598	39999386	chr7:39987598-39999386	0	+	39987598	39987598	8553170	4	660,171,91,26,	0,9895,10445,11762,
#Partially deleted in new
chr7	39987768	39999456	chr7:39987768-39999456	0	+	39987768	39999456	789624	3	490,171,111,	0,9725,11577,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	39987835	40073143	chr7:39987835-40073143	0	+	39987835	40069346	789624	9	423,171,140,171,190,57,102,78,3834,	0,9658,11525,14025,58000,59985,74990,75187,81474,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	39988073	40095508	chr7:39988073-40095508	0	+	39988073	40094980	789624	14	185,171,140,171,190,57,102,78,75,117,132,206,273,1379,	0,9420,11287,13787,57762,59747,74752,74949,85544,89931,90646,100052,104891,106056,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	39998249	40049206	chr7:39998249-40049206	0	+	39998249	39998249	8553170	4	1251,171,190,1386,	0,3611,47586,49571,
#Partially deleted in new
chr7	39998836	40002249	chr7:39998836-40002249	0	+	39998836	39998836	8553170	2	664,389,	0,3024,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	39999388	40066882	chr7:39999388-40066882	0	+	39999388	40066702	789624	7	112,171,190,57,102,78,190,	0,2472,46447,48432,63437,63634,67304,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	40045929	40067973	chr7:40045929-40067973	0	+	40045929	40067356	789624	5	96,57,102,78,714,	0,1891,16896,17093,21330,
#Partially deleted in new
chr7	40059214	40093168	chr7:40059214-40093168	0	+	40059214	40059214	8553170	7	65,102,78,117,132,206,204,	0,3611,3808,18790,19505,28911,33750,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	40060819	40095546	chr7:40060819-40095546	0	+	40060819	40060819	8553170	7	2108,78,117,132,206,453,1417,	0,2203,17185,17900,27306,31965,33310,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	40062510	40095482	chr7:40062510-40095482	0	+	40062510	40062510	8553170	7	417,78,117,132,206,273,1353,	0,512,15494,16209,25615,30454,31619,
#Partially deleted in new
chr7	40078413	40095462	chr7:40078413-40095462	0	+	40078413	40078413	8553170	4	438,206,273,1333,	0,9712,14551,15716,
#Partially deleted in new
chr7	40092246	40095532	chr7:40092246-40095532	0	+	40092246	40092246	8553170	2	991,1403,	0,1883,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	40107287	40107454	chr7:40107287-40107454	7	+	40107287	40107287	16724991	1	167,	0,
#Partially deleted in new
chr7	40115684	40115943	chr7:40115684-40115943	7	+	40115684	40115684	16724991	1	259,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	40126022	40134652	chr7:40126022-40134652	3	-	40133058	40134567	789624	2	7237,424,	0,8206,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	40128120	40128232	chr7:40128120-40128232	3	-	40128120	40128120	8553170	1	112,	0,
#Partially deleted in new
chr7	40132742	40134652	chr7:40132742-40134652	1	-	40133058	40134567	789624	2	517,424,	0,1486,
#Partially deleted in new
chr7	40134976	40860763	chr7:40134976-40860763	1	+	40134999	40860479	789624	14	144,52,74,86,51,121,92,144,96,72,98,103,64,448,	0,45970,46978,53518,54567,59963,102658,139536,181783,314310,324124,361307,614457,725339,
#Partially deleted in new
chr7	40134976	40860631	chr7:40134976-40860631	1	+	40134999	40860479	789624	13	144,52,74,86,51,121,92,96,72,98,103,64,316,	0,45970,46978,53518,54567,59963,102658,181783,314310,324124,361307,614457,725339,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	40134976	40860631	chr7:40134976-40860631	3	+	40134999	40860479	789624	15	144,52,74,86,51,121,92,144,96,72,98,103,78,64,316,	0,45970,46978,53518,54567,59963,102658,139536,181783,314310,324124,361307,549079,614457,725339,
#Partially deleted in new
chr7	40135000	40194975	chr7:40135000-40194975	0	+	40135000	40181983	789624	5	120,74,86,51,36,	0,46954,53494,54543,59939,
#Partially deleted in new
chr7	40135015	40499514	chr7:40135015-40499514	0	+	40135015	40499186	789624	13	105,52,74,86,51,121,92,144,96,72,98,103,499,	0,45931,46939,53479,54528,59924,102619,139497,181744,314271,324085,361268,364000,
#Partially deleted in new
chr7	40151612	40154151	chr7:40151612-40154151	7	+	40151612	40151612	16724991	3	103,257,1120,	0,828,1419,
#Partially deleted in new
chr7	40274510	40388158	chr7:40274510-40388158	0	+	40274510	40274510	8553170	3	146,96,258,	0,42249,113390,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	40538126	40546928	chr7:40538126-40546928	3	-	40538126	40538126	8553170	2	1556,215,	0,8587,
#Partially deleted in new
chr7	40775557	40785217	chr7:40775557-40785217	3	+	40775557	40775557	8553170	4	152,124,71,34,	0,7031,7959,9626,
#Partially deleted in new
chr7	40793181	40860757	chr7:40793181-40860757	0	+	40793181	40793181	8553170	2	67,442,	0,67134,
#Partially deleted in new
chr7	40808156	40860509	chr7:40808156-40860509	0	+	40808156	40808156	8553170	2	258,194,	0,52159,
#Partially deleted in new
chr7	40964666	40979939	chr7:40964666-40979939	3	-	40964666	40964666	789624	3	2627,70,566,	0,3448,14707,
#Partially deleted in new
chr7	41667167	41705335	chr7:41667167-41705335	0	-	41667167	41667167	8553170	3	138,196,52,	0,711,38116,
#Deleted in new
chr7	41685113	41703108	chr7:41685113-41703108	3	-	41689649	41700374	0	3	5429,531,104,	0,14873,17891,
#Deleted in new
chr7	41689515	41692564	chr7:41689515-41692564	0	-	41689515	41689515	8553170	2	1027,1376,	0,1673,
#Deleted in new
chr7	41689533	41700609	chr7:41689533-41700609	1	-	41689649	41700374	0	2	1009,623,	0,10453,
#Deleted in new
chr7	41689589	41705834	chr7:41689589-41705834	1	-	41689649	41700374	0	5	953,531,82,188,248,	0,10397,13415,15694,15997,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	41693915	41779388	chr7:41693915-41779388	3	+	41693915	41693915	789624	4	173,185,99,2548,	0,16682,78980,82925,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	41693936	41712757	chr7:41693936-41712757	1	+	41693936	41693936	8553170	2	152,2160,	0,16661,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	41693947	41713194	chr7:41693947-41713194	0	+	41693947	41693947	789624	3	141,185,1532,	0,16650,17715,
#Partially deleted in new
chr7	41960949	42237013	chr7:41960949-42237013	3	-	41964329	42223253	0	15	5692,328,291,165,150,141,114,214,202,147,206,106,243,166,43,	0,6646,11387,16608,17649,62518,64314,65249,79088,84434,87541,115802,187276,262180,276021,
#Partially deleted in new
chr7	41964081	42152453	chr7:41964081-42152453	1	-	41964329	42148415	789624	14	2560,328,291,165,150,141,114,214,202,147,206,106,243,101,	0,3514,8255,13476,14517,59386,61182,62117,75956,81302,84409,112670,184144,188271,
#Deleted in new
chr7	41972439	41977922	chr7:41972439-41977922	0	-	41972439	41972439	8553170	2	188,365,	0,5118,
#Partially deleted in new
chr7	42048629	42227721	chr7:42048629-42227721	0	-	42048629	42223253	789624	5	67,106,243,166,71,	0,28122,99596,174500,179021,
#Deleted in new
chr7	42113364	42113620	chr7:42113364-42113620	7	+	42113364	42113364	16724991	1	256,	0,
#Partially deleted in new
chr7	42118192	42152420	chr7:42118192-42152420	1	-	42118309	42148415	789624	4	140,243,164,68,	0,30033,31827,34160,
#Partially deleted in new
chr7	42118192	42152420	chr7:42118192-42152420	0	-	42145556	42148415	789624	5	140,169,243,83,1186,	0,27245,30033,31827,33042,
#Deleted in new
chr7	42145317	42152420	chr7:42145317-42152420	1	-	42145556	42148415	789624	4	289,243,83,68,	0,2908,4702,7035,
#Partially deleted in new
chr7	42172490	42237059	chr7:42172490-42237059	1	-	42172519	42223253	789624	3	196,166,89,	0,50639,64480,
#Partially deleted in new
chr7	42222799	42237870	chr7:42222799-42237870	0	-	42222799	42222799	8553170	2	496,87,	0,14984,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	42661725	42706447	chr7:42661725-42706447	3	-	42661725	42661725	789624	3	767,187,217,	0,11059,44505,
#Partially deleted in new
chr7	42794905	42802494	chr7:42794905-42802494	7	+	42794905	42794905	16724991	3	1277,207,126,	0,1744,7463,
#Partially deleted in new
chr7	42829671	42844438	chr7:42829671-42844438	3	-	42829671	42829671	8553170	2	419,142,	0,14625,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	42901271	42902639	chr7:42901271-42902639	3	-	42901271	42901271	8553170	1	1368,	0,
#Deleted in new
chr7	42908725	42912169	chr7:42908725-42912169	3	-	42909634	42910900	789624	2	2196,255,	0,3189,
#Partially deleted in new
chr7	42909272	42932174	chr7:42909272-42932174	3	-	42917573	42932158	789624	9	1649,177,58,74,82,123,133,77,57,	0,8241,8505,12585,14052,15402,17263,18110,22845,
#Deleted in new
chr7	42909274	42912090	chr7:42909274-42912090	1	-	42909634	42912067	789624	2	1647,176,	0,2640,
#Deleted in new
chr7	42909452	42912090	chr7:42909452-42912090	1	-	42909634	42912067	789624	2	1469,176,	0,2462,
#Deleted in new
chr7	42909621	42911910	chr7:42909621-42911910	1	-	42909634	42910900	789624	2	1300,443,	0,1846,
#Deleted in new
chr7	42910366	42912305	chr7:42910366-42912305	0	-	42910366	42910900	789624	2	555,82,	0,1857,
#Deleted in new
chr7	42910645	42911944	chr7:42910645-42911944	0	-	42910645	42910900	789624	2	548,30,	0,1269,
#Partially deleted in new
chr7	42910738	42932171	chr7:42910738-42932171	0	-	42924768	42932158	789624	7	183,638,74,82,123,77,54,	0,1176,11119,12586,13936,16644,21379,
#Partially deleted in new
chr7	42916856	42932223	chr7:42916856-42932223	3	-	42917573	42932158	0	8	834,58,74,82,123,133,77,106,	0,921,5001,6468,7818,9679,10526,15261,
#Partially deleted in new
chr7	42916881	42932154	chr7:42916881-42932154	0	-	42931136	42932154	789624	9	809,58,74,82,123,133,77,60,37,	0,896,4976,6443,7793,9654,10501,14214,15236,
#Partially deleted in new
chr7	42917308	42927464	chr7:42917308-42927464	0	-	42924768	42927464	789624	6	382,58,74,82,123,82,	0,469,4549,6016,7366,10074,
#Partially deleted in new
chr7	42917412	42932185	chr7:42917412-42932185	1	-	42917573	42932158	789624	6	278,58,74,82,123,68,	0,365,4445,5912,7262,14705,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	42918073	42932172	chr7:42918073-42932172	0	-	42926640	42932158	789624	5	3858,82,123,133,55,	0,5251,6601,8462,14044,
#Partially deleted in new
chr7	42918740	42920084	chr7:42918740-42920084	7	+	42918740	42918740	16724991	2	87,956,	0,388,
#Partially deleted in new
chr7	42932199	42937857	chr7:42932199-42937857	3	+	42932386	42937576	0	3	317,182,536,	0,2755,5122,
#Partially deleted in new
chr7	42932375	42937627	chr7:42932375-42937627	0	+	42932386	42935148	789624	3	141,2287,306,	0,2579,4946,
#Deleted in new
chr7	42935020	42937857	chr7:42935020-42937857	0	+	42935020	42937175	789624	3	116,78,536,	0,2143,2301,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	42935042	42948958	chr7:42935042-42948958	0	+	42935042	42935042	8553170	2	94,394,	0,13522,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	42956021	43048062	chr7:42956021-43048062	1	-	42956021	42956021	8553170	3	111,74,481,	0,88525,91560,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	42971540	43113931	chr7:42971540-43113931	3	-	42971540	42971540	8553170	4	1308,58,74,308,	0,56797,73006,142083,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	42972623	43059550	chr7:42972623-43059550	0	-	42972623	42972623	8553170	4	225,58,74,456,	0,55714,71923,86471,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	42972625	43059508	chr7:42972625-43059508	0	-	42972625	42972625	8553170	5	223,58,114,74,414,	0,55712,64859,71921,86469,
#Partially deleted in new
chr7	42972680	42982984	chr7:42972680-42982984	0	-	42972680	42972680	8553170	2	168,51,	0,10253,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	43096731	43096844	chr7:43096731-43096844	3	+	43096731	43096731	8553170	1	113,	0,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr7	43112598	43566001	chr7:43112598-43566001	3	+	43243905	43561926	0	30	339,235,58,325,108,95,76,170,143,101,1353,102,151,140,122,186,135,106,97,84,110,121,114,153,99,130,147,115,199,4187,	0,1558,131276,199164,208036,248287,284215,294963,325404,329930,331619,338229,343698,351061,353848,356321,367011,379476,380485,388100,388614,394538,395419,396370,428564,429270,437846,439623,441993,449216,
#Partially deleted in new
chr7	43112628	43311984	chr7:43112628-43311984	0	+	43112628	43112628	8553170	2	309,222,	0,199134,
#Partially deleted in new
chr7	43112644	43562052	chr7:43112644-43562052	1	+	43243905	43561926	0	28	293,58,325,108,95,76,170,143,101,1353,151,140,122,186,135,106,97,84,110,121,114,153,99,130,147,115,199,238,	0,131230,199118,207990,248241,284169,294917,325358,329884,331573,343652,351015,353802,356275,366965,379430,380439,388054,388568,394492,395373,396324,428518,429224,437800,439577,441947,449170,
#Partially deleted in new
chr7	43113740	43438763	chr7:43113740-43438763	0	+	43113740	43113740	8553170	7	651,325,108,95,76,170,761,	0,198022,206894,247145,283073,293821,324262,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	43117895	43163187	chr7:43117895-43163187	3	+	43117895	43117895	789624	7	680,249,217,138,187,106,262,	0,1051,3907,29552,30745,43714,45030,
#Deleted in new
chr7	43150894	43150994	chr7:43150894-43150994	3	+	43150894	43150894	5263520	1	100,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	43194420	43194482	chr7:43194420-43194482	3	+	43194420	43194420	8553170	1	62,	0,
#Deleted in new
chr7	43207761	43207866	chr7:43207761-43207866	3	-	43207761	43207761	8553170	1	105,	0,
#Partially deleted in new
chr7	43239065	43249268	chr7:43239065-43249268	3	-	43239065	43239065	8553170	3	160,109,86,	0,846,10117,
#Partially deleted in new
chr7	43241069	43249247	chr7:43241069-43249247	1	-	43241069	43241069	8553170	2	413,65,	0,8113,
#Partially deleted in new
chr7	43245362	43249242	chr7:43245362-43249242	1	-	43245362	43245362	8553170	2	437,60,	0,3820,
#Partially deleted in new
chr7	43248586	43258709	chr7:43248586-43258709	0	+	43248586	43248586	8553170	3	61,261,175,	0,632,9948,
#Partially deleted in new
chr7	43248935	43258740	chr7:43248935-43258740	0	+	43248935	43248935	8553170	2	544,206,	0,9599,
#Partially deleted in new
chr7	43249136	43311993	chr7:43249136-43311993	0	+	43249136	43249136	8553170	2	343,231,	0,62626,
#Deleted in new
chr7	43274158	43274582	chr7:43274158-43274582	7	+	43274158	43274158	16724991	1	424,	0,
#Partially deleted in new
chr7	43377777	43407731	chr7:43377777-43407731	0	+	43377777	43377777	8553170	3	166,76,170,	0,19036,29784,
#Partially deleted in new
chr7	43396672	43440597	chr7:43396672-43440597	0	+	43396672	43396672	8553170	4	47,76,170,2595,	0,141,10889,41330,
#Partially deleted in new
chr7	43479607	43484615	chr7:43479607-43484615	0	+	43479607	43479607	8553170	2	137,472,	0,4536,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	43508727	43522542	chr7:43508727-43522542	3	-	43508727	43508727	789624	3	1520,1141,255,	0,2255,13560,
#Partially deleted in new
chr7	43582757	43619723	chr7:43582757-43619723	0	+	43582757	43582757	8553170	4	204,213,145,127,	0,13143,25498,36839,
#Partially deleted in new
chr7	43583064	43626786	chr7:43583064-43626786	3	+	43583243	43624842	789624	7	385,213,145,127,49,180,2269,	0,12836,25191,36532,40507,40644,41453,
#Partially deleted in new
chr7	43583073	43650713	chr7:43583073-43650713	0	+	43583243	43624842	8553170	9	376,213,145,127,49,180,518,109,156,	0,12827,25182,36523,40498,40635,41444,43404,67484,
#Partially deleted in new
chr7	43608455	43729513	chr7:43608455-43729513	0	-	43639581	43648614	789624	7	1040,233,77,149,100,53,85,	0,30993,32117,36795,39079,40144,120973,
#Partially deleted in new
chr7	43608818	43729513	chr7:43608818-43729513	2	-	43639581	43648614	789624	7	823,233,77,149,100,53,85,	0,30630,31754,36432,38716,39781,120610,
#Partially deleted in new
chr7	43609232	43729483	chr7:43609232-43729483	0	-	43639581	43648614	789624	8	409,233,77,149,100,53,101,55,	0,30216,31340,36018,38302,39367,41379,120196,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	43622288	43625184	chr7:43622288-43625184	0	+	43622288	43622288	8553170	2	1600,667,	0,2229,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	43631151	43729717	chr7:43631151-43729717	0	-	43639581	43648614	789624	8	2257,233,77,149,100,53,65,289,	0,8297,9421,14099,16383,17448,34506,98277,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	43638798	43646425	chr7:43638798-43646425	0	-	43638798	43638798	8553170	3	883,77,1175,	0,1774,6452,
#Partially deleted in new
chr7	43639246	43729541	chr7:43639246-43729541	1	-	43639581	43648614	789624	6	435,77,149,100,53,113,	0,1326,6004,8288,9353,90182,
#Partially deleted in new
chr7	43639256	43729489	chr7:43639256-43729489	1	-	43639581	43648614	789624	7	425,77,149,100,53,220,61,	0,1316,5994,8278,9343,11236,90172,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	43639256	43650296	chr7:43639256-43650296	1	-	43639581	43648614	789624	5	425,77,149,100,1697,	0,1316,5994,8278,9343,
#Deleted in new
chr7	43639256	43642164	chr7:43639256-43642164	0	-	43639256	43639256	8553170	3	425,497,719,	0,1316,2189,
#Partially deleted in new
chr7	43640572	43729523	chr7:43640572-43729523	0	-	43640572	43648614	789624	6	77,149,100,53,50,95,	0,4678,6962,8027,70827,88856,
#Partially deleted in new
chr7	43646296	43729474	chr7:43646296-43729474	0	-	43646570	43648614	789624	5	285,100,53,101,46,	0,1238,2303,4315,83132,
#Partially deleted in new
chr7	43646471	43729483	chr7:43646471-43729483	0	-	43647457	43648614	789624	4	1163,53,101,55,	0,2128,4140,82957,
#Deleted in new
chr7	43647215	43648754	chr7:43647215-43648754	0	-	43647215	43647215	8553170	2	419,155,	0,1384,
#Partially deleted in new
chr7	43647227	43729501	chr7:43647227-43729501	0	-	43648509	43648614	789624	3	1425,101,73,	0,3384,82201,
#Partially deleted in new
chr7	43647274	43729483	chr7:43647274-43729483	0	-	43647274	43647274	8553170	4	360,53,101,55,	0,1325,3337,82154,
#Partially deleted in new
chr7	43647350	43729497	chr7:43647350-43729497	0	-	43647457	43648614	789624	3	284,53,69,	0,1249,82078,
#Deleted in new
chr7	43647457	43648614	chr7:43647457-43648614	1	-	43647457	43648614	789624	2	177,15,	0,1142,
#Partially deleted in new
chr7	43648187	43729510	chr7:43648187-43729510	0	-	43648509	43648614	789624	2	465,82,	0,81241,
#Partially deleted in new
chr7	43657221	43729499	chr7:43657221-43729499	0	-	43657221	43657221	8553170	3	48,433,71,	0,1490,72207,
#Partially deleted in new
chr7	43758679	43807339	chr7:43758679-43807339	3	+	43771158	43807235	0	8	55,33,122,120,98,108,172,363,	0,12458,29224,32569,34035,41785,44996,48297,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	43758686	43807342	chr7:43758686-43807342	1	+	43771158	43807235	0	9	48,94,33,122,120,98,108,172,366,	0,1330,12451,29217,32562,34028,41778,44989,48290,
#Partially deleted in new
chr7	43764190	43792767	chr7:43764190-43792767	0	+	43771158	43792767	789624	5	115,33,122,120,53,	0,6947,23713,27058,28524,
#Deleted in new
chr7	43767289	43767599	chr7:43767289-43767599	7	+	43767289	43767289	16724991	1	310,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	43771134	43791847	chr7:43771134-43791847	0	+	43771134	43771134	8553170	3	36,122,599,	0,16769,20114,
#Partially deleted in new
chr7	43800408	43803835	chr7:43800408-43803835	0	+	43800408	43800408	8553170	2	164,160,	0,3267,
#Partially deleted in new
chr7	43866557	43869557	chr7:43866557-43869557	3	-	43866698	43869495	0	4	425,112,69,101,	0,2405,2750,2899,
#Partially deleted in new
chr7	43866557	43906589	chr7:43866557-43906589	3	-	43868985	43906575	789624	7	425,112,69,39,51,71,28,	0,2405,2750,15101,15349,20857,40004,
#Partially deleted in new
chr7	43866561	43869517	chr7:43866561-43869517	1	-	43866698	43866917	789624	3	421,112,210,	0,2401,2746,
#Partially deleted in new
chr7	43866777	43869149	chr7:43866777-43869149	0	-	43866777	43866777	8553170	2	205,187,	0,2185,
#Partially deleted in new
chr7	43866804	43869893	chr7:43866804-43869893	0	-	43866804	43866804	8553170	4	178,112,69,370,	0,2158,2503,2719,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	43867547	43869507	chr7:43867547-43869507	0	-	43867547	43867547	8553170	2	1527,200,	0,1760,
#Partially deleted in new
chr7	43875893	43906311	chr7:43875893-43906311	0	-	43875893	43875893	8553170	7	3367,119,39,51,71,22,691,	0,3774,5765,6013,11521,11896,29727,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	43875912	43889634	chr7:43875912-43889634	1	-	43876666	43881940	789624	4	3348,39,51,2220,	0,5746,5994,11502,
#Partially deleted in new
chr7	43875912	43906615	chr7:43875912-43906615	1	-	43876666	43906575	789624	5	3348,39,51,71,54,	0,5746,5994,11502,30649,
#Partially deleted in new
chr7	43875912	43906626	chr7:43875912-43906626	3	-	43876666	43881940	789624	6	3348,39,51,71,22,65,	0,5746,5994,11502,11877,30649,
#Partially deleted in new
chr7	43875914	43907069	chr7:43875914-43907069	1	-	43876666	43906575	789624	6	3346,39,51,71,27,508,	0,5744,5992,11500,11875,30647,
#Partially deleted in new
chr7	43878790	43906593	chr7:43878790-43906593	0	-	43878790	43881940	789624	4	470,39,51,32,	0,2868,3116,27771,
#Partially deleted in new
chr7	43878843	43926411	chr7:43878843-43926411	0	-	43878843	43881940	789624	6	417,39,51,71,27,280,	0,2815,3063,8571,8946,47288,
#Partially deleted in new
chr7	43878943	43881896	chr7:43878943-43881896	0	-	43878943	43878943	8553170	2	317,238,	0,2715,
#Partially deleted in new
chr7	43878966	43926338	chr7:43878966-43926338	0	-	43878966	43881940	789624	4	294,39,51,207,	0,2692,2940,47165,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	43879047	43882053	chr7:43879047-43882053	0	-	43879047	43879047	8553170	3	213,39,147,	0,2611,2859,
#Partially deleted in new
chr7	43881137	43906627	chr7:43881137-43906627	1	-	43881159	43906575	789624	5	138,39,51,71,66,	0,521,769,6277,25424,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	43887414	43926411	chr7:43887414-43926411	0	-	43887414	43887414	8553170	4	71,27,122,280,	0,375,23316,38717,
#Deleted in new
chr7	43887414	43888107	chr7:43887414-43888107	0	-	43887414	43887414	8553170	2	71,318,	0,375,
#Partially deleted in new
chr7	43918696	43920054	chr7:43918696-43920054	7	+	43918696	43918696	16724991	1	1358,	0,
#Partially deleted in new
chr7	43926441	43953059	chr7:43926441-43953059	0	+	43926532	43948663	789624	5	115,64,106,94,410,	0,11989,22190,24157,26208,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	43926443	43956136	chr7:43926443-43956136	3	+	43926532	43952695	789624	7	113,64,32,78,106,94,3487,	0,11987,16382,16510,22188,24155,26206,
#Partially deleted in new
chr7	43926489	43953057	chr7:43926489-43953057	0	+	43926532	43943058	789624	7	67,64,32,150,106,94,408,	0,11941,16336,16464,22142,24109,26160,
#Partially deleted in new
chr7	43926515	43949199	chr7:43926515-43949199	1	+	43926532	43948802	789624	5	41,64,32,78,568,	0,11915,16310,16438,22116,
#Partially deleted in new
chr7	43926517	43953567	chr7:43926517-43953567	0	+	43926517	43926517	8553170	6	39,64,78,106,94,918,	0,11913,16436,22114,24081,26132,
#Partially deleted in new
chr7	43938430	43952957	chr7:43938430-43952957	0	+	43938430	43948663	789624	3	64,106,308,	0,10201,14219,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	43940894	44019149	chr7:43940894-44019149	3	-	43940894	43940894	789624	16	4054,191,676,118,95,132,130,62,114,77,211,162,87,178,90,89,	0,5239,11626,21078,24972,25369,28837,31735,32315,45706,46783,47191,72698,73711,75539,78166,
#Partially deleted in new
chr7	43948601	43952957	chr7:43948601-43952957	0	+	43948601	43948601	8553170	3	136,94,308,	0,1997,4048,
#Partially deleted in new
chr7	43961589	43973323	chr7:43961589-43973323	7	-	43961589	43961589	16724991	7	168,183,98,393,130,62,114,	0,365,4277,4413,8142,11040,11620,
#Partially deleted in new
chr7	43984994	43990207	chr7:43984994-43990207	7	-	43984994	43984994	16724991	6	109,121,77,211,162,113,	0,1197,1606,2683,3091,5100,
#Partially deleted in new
chr7	44000888	44010122	chr7:44000888-44010122	3	+	44001025	44007768	789624	7	396,228,59,86,319,105,1456,	0,1701,2964,4253,6379,6820,7778,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	44004045	44007866	chr7:44004045-44007866	3	-	44004045	44004045	8553170	3	1290,141,435,	0,3142,3386,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	44011881	44038978	chr7:44011881-44038978	3	-	44011881	44011881	8553170	6	1798,90,121,379,138,172,	0,4552,18899,22051,24790,26925,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	44013561	44019170	chr7:44013561-44019170	7	-	44013561	44013561	16724991	3	1222,90,110,	0,2872,5499,
#Partially deleted in new
chr7	44014602	44019113	chr7:44014602-44019113	5	-	44014602	44014602	16724991	3	181,90,53,	0,1831,4458,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	44026950	44039008	chr7:44026950-44039008	5	-	44026950	44026950	16724991	5	2505,65,121,300,202,	0,2616,3830,7061,11856,
#Partially deleted in new
chr7	44029226	44039002	chr7:44029226-44039002	4	-	44029226	44029226	16724991	5	229,65,121,379,196,	0,340,1554,4706,9580,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	44029333	44041892	chr7:44029333-44041892	7	-	44029333	44029333	16724991	11	122,65,121,136,138,170,145,138,193,110,60,	0,233,1447,4842,7338,9473,10185,10898,11245,11643,12499,
#Deleted in new
chr7	44039170	44041103	chr7:44039170-44041103	0	+	44039170	44039170	8553170	2	113,1210,	0,723,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	44039522	44042306	chr7:44039522-44042306	3	+	44039522	44039522	8553170	2	177,2413,	0,371,
#Partially deleted in new
chr7	44044639	44061333	chr7:44044639-44061333	1	+	44044737	44060916	0	13	181,56,113,75,147,78,152,49,82,96,116,106,557,	0,5585,7190,8227,12117,13142,13489,13792,14262,14714,14903,15408,16137,
#Partially deleted in new
chr7	44044639	44061714	chr7:44044639-44061714	1	+	44050238	44060916	0	11	181,56,147,78,152,52,82,96,116,106,938,	0,5585,12117,13142,13489,13789,14262,14714,14903,15408,16137,
#Partially deleted in new
chr7	44044672	44060943	chr7:44044672-44060943	1	+	44044737	44060916	0	12	148,56,113,75,78,152,52,82,96,116,106,167,	0,5552,7157,8194,13109,13456,13756,14229,14681,14870,15375,16104,
#Partially deleted in new
chr7	44044674	44058075	chr7:44044674-44058075	0	+	44044737	44051830	789624	6	146,113,75,147,78,103,	0,7155,8192,12082,13107,13298,
#Partially deleted in new
chr7	44044675	44050694	chr7:44044675-44050694	0	+	44044675	44044675	8553170	2	145,470,	0,5549,
#Partially deleted in new
chr7	44044675	44061145	chr7:44044675-44061145	1	+	44052923	44060916	0	11	145,75,147,78,152,49,82,96,116,106,369,	0,8191,12081,13106,13453,13756,14226,14678,14867,15372,16101,
#Partially deleted in new
chr7	44044685	44061609	chr7:44044685-44061609	0	+	44044737	44056769	789624	11	135,40,164,78,152,52,82,96,116,106,833,	0,5539,12054,13096,13443,13743,14216,14668,14857,15362,16091,
#Partially deleted in new
chr7	44044701	44058493	chr7:44044701-44058493	0	+	44044737	44056769	789624	5	119,147,78,152,65,	0,12055,13080,13427,13727,
#Partially deleted in new
chr7	44044701	44061172	chr7:44044701-44061172	1	+	44044737	44060916	789624	12	119,56,113,147,78,152,52,82,96,116,106,396,	0,5523,7128,12055,13080,13427,13727,14200,14652,14841,15346,16075,
#Partially deleted in new
chr7	44044701	44058223	chr7:44044701-44058223	0	+	44044737	44056806	789624	7	119,56,113,85,147,78,95,	0,5523,7128,8165,12055,13080,13427,
#Partially deleted in new
chr7	44044701	44060939	chr7:44044701-44060939	0	+	44044737	44050242	789624	13	165,56,113,75,147,78,152,52,82,96,116,106,163,	0,5523,7128,8165,12055,13080,13427,13727,14200,14652,14841,15346,16075,
#Partially deleted in new
chr7	44044705	44058263	chr7:44044705-44058263	0	+	44044737	44050242	789624	5	137,56,147,78,135,	0,5519,12051,13076,13423,
#Partially deleted in new
chr7	44044707	44061328	chr7:44044707-44061328	0	+	44044737	44056806	789624	12	113,56,75,147,78,152,49,82,96,116,106,552,	0,5517,8159,12049,13074,13421,13724,14194,14646,14835,15340,16069,
#Partially deleted in new
chr7	44044710	44061637	chr7:44044710-44061637	1	+	44044737	44060916	0	13	110,56,113,75,147,78,152,52,106,96,116,106,861,	0,5514,7119,8156,12046,13071,13418,13718,14167,14643,14832,15337,16066,
#Partially deleted in new
chr7	44044716	44059442	chr7:44044716-44059442	0	+	44044737	44050242	789624	9	150,56,75,147,78,152,49,82,89,	0,5508,8150,12040,13065,13412,13715,14185,14637,
#Partially deleted in new
chr7	44044716	44061716	chr7:44044716-44061716	3	+	44044737	44060916	0	13	104,56,113,75,147,78,152,52,82,96,116,106,940,	0,5508,7113,8150,12040,13065,13412,13712,14185,14637,14826,15331,16060,
#Partially deleted in new
chr7	44044719	44061237	chr7:44044719-44061237	0	+	44044737	44056806	789624	11	101,56,147,78,152,52,82,96,116,106,461,	0,5505,12037,13062,13409,13709,14182,14634,14823,15328,16057,
#Partially deleted in new
chr7	44044729	44057933	chr7:44044729-44057933	0	+	44044729	44044729	8553170	6	91,56,113,75,147,152,	0,5495,7100,8137,12027,13052,
#Partially deleted in new
chr7	44049883	44061637	chr7:44049883-44061637	0	+	44049883	44049883	8553170	10	2059,75,147,499,49,82,96,116,106,861,	0,2983,6873,7898,8548,9018,9470,9659,10164,10893,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	44050243	44069456	chr7:44050243-44069456	0	+	44050243	44060916	789624	11	37,75,147,78,152,49,82,96,116,106,8680,	0,2623,6513,7538,7885,8188,8658,9110,9299,9804,10533,
#Deleted in new
chr7	44051765	44051829	chr7:44051765-44051829	3	+	44051765	44051765	5263520	1	64,	0,
#Deleted in new
chr7	44056792	44061714	chr7:44056792-44061714	0	+	44056792	44056792	8553170	9	111,78,20,152,552,96,116,106,938,	0,989,1180,1336,1639,2561,2750,3255,3984,
#Deleted in new
chr7	44058929	44061397	chr7:44058929-44061397	0	+	44058929	44060916	789624	4	54,116,106,621,	0,613,1118,1847,
#Partially deleted in new
chr7	44062726	44065587	chr7:44062726-44065587	3	-	44062763	44065529	789624	3	204,181,472,	0,2105,2389,
#Deleted in new
chr7	44064907	44066079	chr7:44064907-44066079	3	+	44064907	44064907	8553170	2	610,98,	0,1074,
#Deleted in new
chr7	44065004	44066079	chr7:44065004-44066079	0	+	44065004	44065004	8553170	2	513,94,	0,981,
#Partially deleted in new
chr7	44072246	44082540	chr7:44072246-44082540	3	-	44073290	44082438	0	11	1131,84,243,103,133,121,72,171,99,184,290,	0,1378,1536,1884,2151,4262,6493,7324,7614,8486,10004,
#Partially deleted in new
chr7	44072246	44082464	chr7:44072246-44082464	1	-	44073290	44082438	0	10	1131,84,243,125,121,72,171,99,184,214,	0,1378,1536,2151,4262,6493,7324,7614,8486,10004,
#Partially deleted in new
chr7	44072249	44082490	chr7:44072249-44082490	0	-	44074506	44082438	789624	7	1181,84,243,400,72,184,240,	0,1375,1533,1881,6490,8483,10001,
#Partially deleted in new
chr7	44072255	44082485	chr7:44072255-44082485	1	-	44073061	44082438	0	9	1175,84,243,133,56,171,99,184,235,	0,1369,1527,2142,6500,7315,7605,8477,9995,
#Partially deleted in new
chr7	44072261	44082514	chr7:44072261-44082514	0	-	44076598	44082438	789624	11	1116,84,243,90,133,121,56,171,99,184,264,	0,1363,1521,1869,2136,4247,6494,7309,7599,8471,9989,
#Deleted in new
chr7	44073217	44074118	chr7:44073217-44074118	0	-	44073217	44073217	8553170	3	160,84,336,	0,407,565,
#Deleted in new
chr7	44073377	44073433	chr7:44073377-44073433	3	-	44073377	44073377	5263520	1	56,	0,
#Partially deleted in new
chr7	44073861	44082483	chr7:44073861-44082483	0	-	44074393	44082438	789624	6	164,400,121,72,184,233,	0,269,2647,4878,6871,8389,
#Partially deleted in new
chr7	44074140	44077026	chr7:44074140-44077026	0	-	44074140	44074140	8553170	4	80,133,121,158,	0,257,2368,2728,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	44075718	44082478	chr7:44075718-44082478	0	-	44075718	44075718	8553170	6	911,56,171,99,184,228,	0,3037,3852,4142,5014,6532,
#Partially deleted in new
chr7	44076576	44079924	chr7:44076576-44079924	0	-	44078640	44079924	789624	4	53,258,171,64,	0,1977,2994,3284,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	44078350	44082484	chr7:44078350-44082484	0	-	44078350	44078350	8553170	5	461,171,99,184,234,	0,1220,1510,2382,3900,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	44078465	44082511	chr7:44078465-44082511	0	-	44078465	44078465	8553170	4	346,171,184,261,	0,1105,2267,3785,
#Partially deleted in new
chr7	44078647	44082477	chr7:44078647-44082477	0	-	44078647	44078647	8553170	3	164,184,227,	0,2085,3603,
#Partially deleted in new
chr7	44079570	44082500	chr7:44079570-44082500	0	-	44079931	44082438	789624	5	171,99,107,184,250,	0,290,794,1162,2680,
#Partially deleted in new
chr7	44079636	44082511	chr7:44079636-44082511	0	-	44079636	44082438	789624	3	105,184,261,	0,1096,2614,
#Partially deleted in new
chr7	44079732	44082530	chr7:44079732-44082530	0	-	44079732	44082438	789624	4	24,99,184,280,	0,128,1000,2518,
#Partially deleted in new
chr7	44079814	44082482	chr7:44079814-44082482	0	-	44079814	44079814	8553170	3	145,184,232,	0,918,2436,
#Deleted in new
chr7	44104360	44114560	chr7:44104360-44114560	3	+	44104665	44114261	789624	21	558,342,72,72,123,78,78,78,54,110,140,85,145,86,124,197,180,352,140,100,967,	0,2185,3078,3268,3448,3646,4538,4746,4927,5654,5846,6364,6552,6793,7146,7493,7781,8197,8630,8891,9233,
#Deleted in new
chr7	44104793	44109162	chr7:44104793-44109162	0	+	44104793	44109162	789624	6	125,342,72,78,78,56,	0,1752,2645,3213,4105,4313,
#Deleted in new
chr7	44106160	44107700	chr7:44106160-44107700	0	+	44106239	44107700	789624	4	80,342,72,72,	0,385,1278,1468,
#Deleted in new
chr7	44108930	44110225	chr7:44108930-44110225	0	+	44108930	44109688	789624	5	46,78,54,468,19,	0,176,357,726,1276,
#Deleted in new
chr7	44109106	44110065	chr7:44109106-44110065	0	+	44109106	44109106	8553170	3	78,54,421,	0,181,538,
#Deleted in new
chr7	44110263	44111622	chr7:44110263-44111622	0	+	44110263	44110956	789624	4	83,333,86,116,	0,461,890,1243,
#Deleted in new
chr7	44110730	44114562	chr7:44110730-44114562	1	+	44110798	44114261	789624	8	509,124,197,180,352,140,100,969,	0,776,1123,1411,1827,2260,2521,2863,
#Deleted in new
chr7	44110848	44110912	chr7:44110848-44110912	3	+	44110848	44110848	789624	1	64,	0,
#Deleted in new
chr7	44111204	44114559	chr7:44111204-44114559	0	+	44111204	44111671	789624	8	35,266,197,116,352,140,100,966,	0,302,649,1001,1353,1786,2047,2389,
#Deleted in new
chr7	44111506	44112616	chr7:44111506-44112616	0	+	44111506	44111671	789624	3	544,180,59,	0,635,1051,
#Partially deleted in new
chr7	44114680	44123559	chr7:44114680-44123559	1	-	44114784	44123559	789624	11	265,102,128,158,81,199,115,124,122,276,49,	0,614,1085,1434,1749,2136,2452,2938,3262,7153,8830,
#Duplicated in new
chr7	44114686	44123508	chr7:44114686-44123508	3	-	44114784	44122053	0	12	259,102,128,158,81,199,115,124,122,362,178,330,	0,608,1079,1428,1743,2130,2446,2932,3256,7147,7595,8492,
#Deleted in new
chr7	44114687	44115564	chr7:44114687-44115564	0	-	44114687	44114687	8553170	2	258,270,	0,607,
#Partially deleted in new
chr7	44114698	44122196	chr7:44114698-44122196	1	-	44114784	44122053	789624	10	247,60,128,158,81,199,115,124,122,363,	0,596,1067,1416,1731,2118,2434,2920,3244,7135,
#Partially deleted in new
chr7	44114784	44123530	chr7:44114784-44123530	1	-	44114784	44122053	0	11	161,102,128,158,81,199,115,124,122,449,20,	0,510,981,1330,1645,2032,2348,2834,3158,7049,8726,
#Deleted in new
chr7	44115820	44116510	chr7:44115820-44116510	0	-	44115820	44116510	789624	3	73,95,81,	0,294,609,
#Partially deleted in new
chr7	44116116	44123537	chr7:44116116-44123537	0	-	44116116	44122053	789624	6	156,81,199,115,276,27,	0,313,700,1016,5717,7394,
#Deleted in new
chr7	44116902	44117560	chr7:44116902-44117560	0	-	44116902	44116902	8553170	2	113,428,	0,230,
#Partially deleted in new
chr7	44116936	44124358	chr7:44116936-44124358	0	-	44116936	44122053	789624	6	79,115,124,122,276,49,	0,196,682,1006,4897,7373,
#Partially deleted in new
chr7	44117062	44122109	chr7:44117062-44122109	0	-	44117062	44117062	8553170	4	185,124,122,276,	0,556,880,4771,
#Partially deleted in new
chr7	44117148	44123532	chr7:44117148-44123532	0	-	44117148	44117148	8553170	5	99,159,122,276,22,	0,435,794,4685,6362,
#Deleted in new
chr7	44117313	44118093	chr7:44117313-44118093	0	-	44117313	44117313	8553170	2	429,151,	0,629,
#Partially deleted in new
chr7	44117516	44121905	chr7:44117516-44121905	0	-	44117516	44117516	8553170	3	226,122,72,	0,426,4317,
#Deleted in new
chr7	44117576	44118304	chr7:44117576-44118304	0	-	44117576	44117576	8553170	2	166,362,	0,366,
#Partially deleted in new
chr7	44117618	44123029	chr7:44117618-44123029	0	-	44117618	44122053	789624	4	124,122,276,143,	0,324,4215,5268,
#Partially deleted in new
chr7	44117640	44123668	chr7:44117640-44123668	0	-	44117640	44122053	789624	4	102,122,276,56,	0,302,4193,5972,
#Partially deleted in new
chr7	44117792	44123533	chr7:44117792-44123533	0	-	44117792	44117792	8553170	3	272,276,23,	0,4041,5718,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	44122087	44123496	chr7:44122087-44123496	0	-	44122087	44122087	8553170	3	22,178,610,	0,194,799,
#Deleted in new
chr7	44125751	44125873	chr7:44125751-44125873	7	-	44125751	44125751	16724991	1	122,	0,
#Deleted in new
chr7	44138863	44141332	chr7:44138863-44141332	3	-	44138920	44141305	789624	7	159,49,79,105,76,114,30,	0,657,918,1459,1848,2097,2439,
#Deleted in new
chr7	44138863	44140401	chr7:44138863-44140401	0	-	44138920	44140401	789624	4	159,148,79,79,	0,558,918,1459,
#Deleted in new
chr7	44138865	44141285	chr7:44138865-44141285	1	-	44138920	44140996	789624	6	157,49,79,105,76,325,	0,655,916,1457,1846,2095,
#Deleted in new
chr7	44138868	44141036	chr7:44138868-44141036	0	-	44138868	44138868	8553170	6	154,144,79,105,76,76,	0,652,913,1454,1843,2092,
#Deleted in new
chr7	44138868	44141074	chr7:44138868-44141074	0	-	44138920	44141074	789624	6	154,49,79,105,145,114,	0,652,913,1454,1843,2092,
#Deleted in new
chr7	44139517	44141074	chr7:44139517-44141074	0	-	44139517	44141074	789624	5	52,79,195,76,114,	0,264,805,1194,1443,
#Deleted in new
chr7	44139534	44140566	chr7:44139534-44140566	0	-	44139534	44139534	8553170	3	35,79,244,	0,247,788,
#Deleted in new
chr7	44139651	44141067	chr7:44139651-44141067	0	-	44140418	44141067	789624	3	209,105,107,	0,671,1309,
#Deleted in new
chr7	44140336	44141074	chr7:44140336-44141074	0	-	44140336	44141074	789624	3	91,116,114,	0,375,624,
#Deleted in new
chr7	44140612	44141332	chr7:44140612-44141332	0	-	44141209	44141305	789624	2	175,372,	0,348,
#Partially deleted in new
chr7	44144270	44158114	chr7:44144270-44158114	1	-	44145135	44158114	0	10	1010,234,156,184,100,96,120,155,163,42,	0,1226,2192,3379,5489,5698,6685,8000,9030,13802,
#Deleted in new
chr7	44144272	44146129	chr7:44144272-44146129	0	-	44144272	44144272	8553170	2	1008,633,	0,1224,
#Deleted in new
chr7	44144274	44146144	chr7:44144274-44146144	0	-	44145135	44146144	789624	3	1006,234,71,	0,1222,1799,
#Partially deleted in new
chr7	44144274	44189423	chr7:44144274-44189423	3	-	44145135	44188953	0	10	1006,234,156,184,100,96,120,155,163,515,	0,1222,2188,3375,5485,5694,6681,7996,9026,44634,
#Partially deleted in new
chr7	44144276	44159275	chr7:44144276-44159275	1	-	44145135	44158114	0	11	1004,234,156,184,100,96,120,155,163,124,203,	0,1220,2186,3373,5483,5692,6679,7994,9024,13796,14796,
#Partially deleted in new
chr7	44144277	44159282	chr7:44144277-44159282	1	-	44145135	44159120	0	10	1003,234,156,184,100,96,120,155,163,210,	0,1219,2185,3372,5482,5691,6678,7993,9023,14795,
#Partially deleted in new
chr7	44145131	44188987	chr7:44145131-44188987	1	-	44145135	44188953	789624	10	149,234,156,184,100,96,69,155,163,79,	0,365,1331,2518,4628,4837,5824,7139,8169,43777,
#Deleted in new
chr7	44145643	44147125	chr7:44145643-44147125	0	-	44145643	44145643	8553170	3	87,156,161,	0,819,1321,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	44153390	44198170	chr7:44153390-44198170	0	-	44153390	44153390	8553170	2	73,480,	0,44300,
#Partially deleted in new
chr7	44200967	44212889	chr7:44200967-44212889	1	+	44201135	44212282	789624	6	272,83,101,105,66,643,	0,3600,5417,6420,7165,11279,
#Partially deleted in new
chr7	44201011	44212595	chr7:44201011-44212595	0	+	44201011	44201011	8553170	8	228,83,101,105,66,102,51,349,	0,3556,5373,6376,7121,10011,10542,11235,
#Partially deleted in new
chr7	44201048	44214294	chr7:44201048-44214294	3	+	44201135	44212282	789624	7	191,83,101,105,66,102,2048,	0,3519,5336,6339,7084,9974,11198,
#Partially deleted in new
chr7	44207332	44208580	chr7:44207332-44208580	0	+	44207332	44207332	8553170	2	160,448,	0,800,
#Deleted in new
chr7	44208133	44208707	chr7:44208133-44208707	0	+	44208133	44208133	8553170	2	65,301,	0,273,
#Partially deleted in new
chr7	44208135	44212613	chr7:44208135-44212613	0	+	44208135	44210868	789624	5	63,90,102,51,367,	0,2706,2887,3418,4111,
#Deleted in new
chr7	44210707	44214292	chr7:44210707-44214292	0	+	44210707	44210707	8553170	2	417,2046,	0,1539,
#Partially deleted in new
chr7	44217149	44325496	chr7:44217149-44325496	3	-	44220061	44325421	0	21	586,235,95,76,49,45,72,38,75,43,84,123,95,84,103,73,66,55,60,95,140,	0,2910,3466,3676,13856,15672,17240,17489,22439,23557,24550,25068,25410,26100,26275,29970,37392,41722,45855,66981,108207,
#Partially deleted in new
chr7	44217149	44325631	chr7:44217149-44325631	1	-	44220061	44325421	0	20	2373,235,95,76,49,45,72,41,43,84,123,95,84,103,73,66,55,60,95,275,	0,2910,3466,3676,13856,15672,17240,17489,23557,24550,25068,25410,26100,26275,29970,37392,41722,45855,66981,108207,
#Partially deleted in new
chr7	44217155	44325498	chr7:44217155-44325498	1	-	44220061	44325421	0	24	2367,235,95,76,129,129,114,49,45,72,38,75,43,84,123,95,84,103,73,66,55,60,95,142,	0,2904,3460,3670,9360,11640,12232,13850,15666,17234,17483,22433,23551,24544,25062,25404,26094,26269,29964,37386,41716,45849,66975,108201,
#Partially deleted in new
chr7	44217558	44325475	chr7:44217558-44325475	0	-	44243481	44325421	789624	18	177,235,286,49,45,72,38,75,43,84,123,95,84,103,73,60,95,119,	0,2501,3057,13447,15263,16831,17080,22030,23148,24141,24659,25001,25691,25866,29561,45446,66572,107798,
#Partially deleted in new
chr7	44219212	44225913	chr7:44219212-44225913	0	-	44220061	44225913	789624	5	310,235,95,76,151,	0,847,1403,1613,6550,
#Partially deleted in new
chr7	44219291	44325656	chr7:44219291-44325656	1	-	44220061	44325421	0	21	231,235,95,76,49,45,72,38,75,43,84,123,95,84,103,73,66,55,60,95,300,	0,768,1324,1534,11714,13530,15098,15347,20297,21415,22408,22926,23268,23958,24133,27828,35250,39580,43713,64839,106065,
#Partially deleted in new
chr7	44219345	44325625	chr7:44219345-44325625	1	-	44220061	44325421	0	19	177,235,95,76,49,72,41,43,84,123,95,84,103,73,66,55,60,95,269,	0,714,1270,1480,11660,15044,15293,21361,22354,22872,23214,23904,24079,27774,35196,39526,43659,64785,106011,
#Deleted in new
chr7	44219348	44220953	chr7:44219348-44220953	0	-	44219348	44219348	8553170	4	174,235,95,128,	0,711,1267,1477,
#Partially deleted in new
chr7	44219350	44325431	chr7:44219350-44325431	1	-	44220061	44325421	0	18	172,235,95,76,49,41,43,84,123,95,84,103,73,66,55,60,95,75,	0,709,1265,1475,11655,15288,21356,22349,22867,23209,23899,24074,27769,35191,39521,43654,64780,106006,
#Partially deleted in new
chr7	44219350	44334577	chr7:44219350-44334577	0	-	44219350	44219350	8553170	21	252,235,95,76,49,45,72,38,75,43,84,123,95,84,103,73,66,55,60,95,316,	0,709,1265,1475,11655,13471,15039,15288,20238,21356,22349,22867,23209,23899,24074,27769,35191,39521,43654,64780,114911,
#Partially deleted in new
chr7	44219364	44230347	chr7:44219364-44230347	0	-	44219364	44219364	8553170	6	158,235,95,76,129,1552,	0,695,1251,1461,7151,9431,
#Partially deleted in new
chr7	44219416	44325485	chr7:44219416-44325485	0	-	44231023	44325421	789624	19	106,235,95,76,49,45,72,38,84,123,95,84,103,73,66,55,60,95,129,	0,643,1199,1409,11589,13405,14973,15222,22283,22801,23143,23833,24008,27703,35125,39455,43588,64714,105940,
#Partially deleted in new
chr7	44219429	44325424	chr7:44219429-44325424	1	-	44220061	44325421	0	20	93,235,95,76,49,45,72,38,43,84,123,95,84,103,73,66,55,60,95,68,	0,630,1186,1396,11576,13392,14960,15209,21277,22270,22788,23130,23820,23995,27690,35112,39442,43575,64701,105927,
#Partially deleted in new
chr7	44219429	44325424	chr7:44219429-44325424	1	-	44220061	44325421	0	16	93,235,95,76,43,84,123,95,84,103,73,66,55,60,95,68,	0,630,1186,1396,21277,22270,22788,23130,23820,23995,27690,35112,39442,43575,64701,105927,
#Partially deleted in new
chr7	44219429	44325424	chr7:44219429-44325424	1	-	44220061	44325421	0	20	93,235,17,76,49,45,38,75,43,84,123,95,84,103,73,66,55,60,95,68,	0,630,1186,1396,11576,13392,15209,20159,21277,22270,22788,23130,23820,23995,27690,35112,39442,43575,64701,105927,
#Partially deleted in new
chr7	44220061	44325421	chr7:44220061-44325421	1	-	44220061	44325421	0	19	233,95,76,49,45,72,41,43,84,123,95,84,103,73,66,55,60,95,65,	0,554,764,10944,12760,14328,14577,20645,21638,22156,22498,23188,23363,27058,34480,38810,42943,64069,105295,
#Deleted in new
chr7	44225834	44242306	chr7:44225834-44242306	0	-	44225834	44242306	789624	9	57,49,45,72,38,75,43,84,89,	0,5171,6987,8555,8804,13754,14872,15865,16383,
#Partially deleted in new
chr7	44243250	44259581	chr7:44243250-44259581	0	-	44243250	44243250	8553170	6	83,103,73,66,55,201,	0,174,3869,11291,15621,16130,
#Partially deleted in new
chr7	44243455	44325190	chr7:44243455-44325190	0	-	44243455	44243455	8553170	7	72,73,66,55,60,95,164,	0,3664,11086,15416,19549,40675,81571,
#Partially deleted in new
chr7	44243469	44323962	chr7:44243469-44323962	0	-	44243469	44323923	789624	7	58,73,66,55,60,95,152,	0,3650,11072,15402,19535,40661,80341,
#Partially deleted in new
chr7	44243472	44325474	chr7:44243472-44325474	0	-	44243472	44325421	789624	7	55,109,66,55,60,95,118,	0,3647,11069,15399,19532,40658,81884,
#Partially deleted in new
chr7	44243484	44268825	chr7:44243484-44268825	0	-	44243484	44243484	8553170	6	43,73,66,55,60,233,	0,3635,11057,15387,19520,25108,
#Partially deleted in new
chr7	44244888	44325447	chr7:44244888-44325447	0	-	44244888	44325421	789624	7	127,73,66,55,60,95,91,	0,2231,9653,13983,18116,39242,80468,
#Partially deleted in new
chr7	44247119	44268132	chr7:44247119-44268132	0	-	44247119	44247119	8553170	6	73,66,55,60,173,138,	0,7422,11752,15885,19783,20875,
#Partially deleted in new
chr7	44247128	44326167	chr7:44247128-44326167	0	-	44247128	44247128	8553170	6	64,66,55,60,95,233,	0,7413,11743,15876,37002,78806,
#Partially deleted in new
chr7	44263004	44325519	chr7:44263004-44325519	0	-	44263004	44263004	8553170	4	60,65,95,163,	0,936,21126,62352,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	44367139	44369292	chr7:44367139-44369292	3	-	44367139	44367139	8553170	1	2153,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	44379120	44490880	chr7:44379120-44490880	3	-	44386010	44490600	0	6	7001,189,144,133,317,472,	0,13176,25319,48450,105847,111288,
#Partially deleted in new
chr7	44383590	44402789	chr7:44383590-44402789	0	-	44383590	44383590	8553170	2	166,148,	0,19051,
#Partially deleted in new
chr7	44385350	44392508	chr7:44385350-44392508	0	-	44385350	44385350	8553170	2	771,212,	0,6946,
#Partially deleted in new
chr7	44385813	44402923	chr7:44385813-44402923	0	-	44385813	44385813	8553170	3	308,189,282,	0,6483,16828,
#Partially deleted in new
chr7	44385892	44425950	chr7:44385892-44425950	0	-	44385892	44385892	8553170	4	229,189,144,51,	0,6404,18547,40007,
#Partially deleted in new
chr7	44392384	44471960	chr7:44392384-44471960	0	-	44392384	44392384	8553170	4	101,144,133,192,	0,12055,35186,79384,
#Partially deleted in new
chr7	44404512	44490606	chr7:44404512-44490606	0	-	44404512	44404512	8553170	5	71,133,317,92,198,	0,23058,80455,81018,85896,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	44425909	44427641	chr7:44425909-44427641	0	-	44425909	44425909	8553170	2	244,71,	0,1661,
#Deleted in new
chr7	44467896	44468304	chr7:44467896-44468304	7	+	44467896	44467896	16724991	1	408,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	44484443	44485274	chr7:44484443-44485274	0	-	44484443	44484443	8553170	2	181,307,	0,524,
#Partially deleted in new
chr7	44485068	44490265	chr7:44485068-44490265	0	-	44485068	44485068	8553170	2	216,443,	0,4754,
#Partially deleted in new
chr7	44503772	44503879	chr7:44503772-44503879	3	-	44503772	44503772	8553170	1	107,	0,
#Deleted in new
chr7	44511024	44511332	chr7:44511024-44511332	7	-	44511024	44511024	16724991	1	308,	0,
#Partially deleted in new
chr7	44512537	44541315	chr7:44512537-44541315	1	-	44513446	44541259	789624	18	1112,163,114,232,151,56,127,125,143,138,128,115,183,129,173,101,1526,110,	0,3265,3546,4165,4669,8227,8454,9174,9514,19542,20893,21201,21909,23302,23718,24304,26279,28668,
#Partially deleted in new
chr7	44513360	44541315	chr7:44513360-44541315	1	-	44513446	44541259	789624	19	289,163,114,232,151,56,127,125,191,90,138,128,115,183,129,173,101,1526,110,	0,2442,2723,3342,3846,7404,7631,8351,8691,18394,18719,20070,20378,21086,22479,22895,23481,25456,27845,
#Partially deleted in new
chr7	44533226	44541315	chr7:44533226-44541315	1	-	44533549	44541259	0	7	332,183,129,173,101,1526,110,	0,1220,2613,3029,3615,5590,7979,
#Partially deleted in new
chr7	44565416	44574002	chr7:44565416-44574002	3	-	44566001	44573895	789624	14	663,77,106,90,74,95,114,120,245,91,171,161,162,167,	0,1031,2701,3486,3713,4392,4598,5341,6075,6930,7157,7473,8166,8419,
#Partially deleted in new
chr7	44565803	44573895	chr7:44565803-44573895	0	-	44572569	44573895	789624	14	276,77,106,90,74,95,114,120,245,91,182,161,162,60,	0,644,2314,3099,3326,4005,4211,4954,5688,6543,6759,7086,7779,8032,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	44565804	44575051	chr7:44565804-44575051	0	-	44570010	44573895	789624	14	275,77,106,90,74,95,145,120,245,91,171,161,162,1216,	0,643,2313,3098,3325,4004,4179,4953,5687,6542,6769,7085,7778,8031,
#Deleted in new
chr7	44565806	44567782	chr7:44565806-44567782	0	-	44565806	44565806	8553170	3	273,77,90,	0,641,1886,
#Partially deleted in new
chr7	44565818	44573758	chr7:44565818-44573758	0	-	44565818	44565818	8553170	13	261,77,106,90,74,95,114,120,245,91,171,161,176,	0,629,2299,3084,3311,3990,4196,4939,5673,6528,6755,7071,7764,
#Partially deleted in new
chr7	44565836	44573664	chr7:44565836-44573664	0	-	44568969	44573664	789624	13	243,77,106,103,74,95,114,120,245,91,171,161,82,	0,611,2281,3066,3293,3972,4178,4921,5655,6510,6737,7053,7746,
#Partially deleted in new
chr7	44565836	44573664	chr7:44565836-44573664	0	-	44565836	44565836	8553170	13	243,77,106,90,74,95,114,120,245,91,171,157,82,	0,611,2281,3066,3293,3972,4178,4921,5655,6510,6737,7053,7746,
#Partially deleted in new
chr7	44566001	44573925	chr7:44566001-44573925	1	-	44566001	44573895	789624	13	78,77,106,90,74,95,114,245,91,171,161,162,90,	0,446,2116,2901,3128,3807,4013,5490,6345,6572,6888,7581,7834,
#Deleted in new
chr7	44566137	44569842	chr7:44566137-44569842	0	-	44566279	44569842	789624	5	387,106,90,74,34,	0,1980,2765,2992,3671,
#Partially deleted in new
chr7	44568215	44573908	chr7:44568215-44573908	0	-	44572654	44573895	789624	11	8,103,74,95,145,120,245,91,171,162,73,	0,687,914,1593,1768,2542,3276,4131,4358,5367,5620,
#Deleted in new
chr7	44569751	44570765	chr7:44569751-44570765	0	-	44569751	44569751	8553170	2	377,8,	0,1006,
#Deleted in new
chr7	44572649	44573925	chr7:44572649-44573925	0	-	44572649	44572649	8553170	3	95,161,343,	0,240,933,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	44577893	44582287	chr7:44577893-44582287	1	-	44579478	44582206	789624	4	1735,126,101,241,	0,3555,3829,4153,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	44577893	44582259	chr7:44577893-44582259	3	-	44579478	44582206	789624	5	1735,147,126,101,213,	0,3199,3555,3829,4153,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	44579896	44582231	chr7:44579896-44582231	1	-	44581065	44582206	789624	4	1343,126,101,185,	0,1552,1826,2150,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	44579903	44582210	chr7:44579903-44582210	0	-	44579903	44579903	8553170	3	1336,126,488,	0,1545,1819,
#Deleted in new
chr7	44581092	44582241	chr7:44581092-44582241	0	-	44581092	44581092	8553170	4	147,126,84,188,	0,356,630,961,
#Partially deleted in new
chr7	44601031	44601487	chr7:44601031-44601487	7	+	44601031	44601031	16724991	1	456,	0,
#Partially deleted in new
chr7	44606571	44708230	chr7:44606571-44708230	1	+	44624343	44707999	789624	20	82,249,116,147,91,180,129,180,153,103,129,151,128,179,72,129,73,164,155,352,	0,17745,60164,67839,68606,69398,75148,87253,87852,89453,89857,90342,90798,91032,91620,93569,94971,100653,101010,101307,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	44606587	44676594	chr7:44606587-44676594	1	+	44624343	44676227	0	9	66,249,192,103,116,155,147,91,625,	0,17729,38739,41069,60148,67199,67823,68590,69382,
#Partially deleted in new
chr7	44606590	44708278	chr7:44606590-44708278	1	+	44624343	44707999	789624	24	63,249,192,91,45,116,155,147,91,180,129,180,153,103,129,151,128,179,72,129,73,164,155,400,	0,17726,38736,40853,49727,60145,67196,67820,68587,69379,75129,87234,87833,89434,89838,90323,90779,91013,91601,93550,94952,100634,100991,101288,
#Partially deleted in new
chr7	44606590	44708328	chr7:44606590-44708328	1	+	44624343	44707999	0	23	63,249,192,91,116,155,147,91,180,129,180,153,103,129,151,128,179,72,129,73,164,155,450,	0,17726,38736,40853,60145,67196,67820,68587,69379,75129,87234,87833,89434,89838,90323,90779,91013,91601,93550,94952,100634,100991,101288,
#Partially deleted in new
chr7	44606594	44666851	chr7:44606594-44666851	0	+	44624343	44666851	789624	6	59,70,249,192,103,116,	0,16211,17722,38732,41062,60141,
#Partially deleted in new
chr7	44606627	44708138	chr7:44606627-44708138	1	+	44624343	44707999	789624	24	26,249,192,103,45,116,155,147,91,180,129,180,153,103,129,151,128,179,72,129,73,164,155,260,	0,17689,38699,41029,49690,60108,67159,67783,68550,69342,75092,87197,87796,89397,89801,90286,90742,90976,91564,93513,94915,100597,100954,101251,
#Partially deleted in new
chr7	44606627	44708994	chr7:44606627-44708994	1	+	44624343	44707937	789624	26	26,249,192,103,116,155,147,91,180,129,180,153,103,129,151,128,5,12,159,72,129,73,164,155,55,1060,	0,17689,38699,41029,60108,67159,67783,68550,69342,75092,87197,87796,89397,89801,90286,90742,90975,90983,90996,91564,93513,94915,100597,100954,101251,101307,
#Partially deleted in new
chr7	44606638	44709066	chr7:44606638-44709066	3	+	44624343	44707999	0	23	15,249,192,103,116,155,147,91,180,129,180,153,103,129,151,128,179,72,129,73,164,155,1188,	0,17678,38688,41018,60097,67148,67772,68539,69331,75081,87186,87785,89386,89790,90275,90731,90965,91553,93502,94904,100586,100943,101240,
#Partially deleted in new
chr7	44666620	44675245	chr7:44666620-44675245	0	+	44666620	44666620	8553170	4	231,155,147,68,	0,7166,7790,8557,
#Partially deleted in new
chr7	44666794	44674752	chr7:44666794-44674752	0	+	44666794	44666794	8553170	3	57,155,342,	0,6992,7616,
#Partially deleted in new
chr7	44748580	44768694	chr7:44748580-44768694	1	+	44756249	44767623	789624	18	51,112,115,107,184,261,180,169,145,211,106,158,68,69,245,170,243,1179,	0,7607,7844,8462,8797,9267,10700,11844,12868,13114,14300,14675,15838,16360,16754,17583,17840,18935,
#Partially deleted in new
chr7	44748861	44757050	chr7:44748861-44757050	0	+	44756249	44757050	789624	6	130,166,120,112,115,104,	0,953,2110,7326,7563,8085,
#Partially deleted in new
chr7	44748930	44769881	chr7:44748930-44769881	3	+	44756249	44767623	789624	19	61,112,115,203,184,261,180,78,169,145,211,106,158,68,69,245,170,243,2366,	0,7257,7494,8016,8447,8917,10350,11220,11494,12518,12764,13950,14325,15488,16010,16404,17233,17490,18585,
#Partially deleted in new
chr7	44748961	44757561	chr7:44748961-44757561	0	+	44756249	44756998	789624	5	30,112,115,175,184,	0,7226,7463,8013,8416,
#Partially deleted in new
chr7	44756178	44769878	chr7:44756178-44769878	1	+	44756249	44767623	789624	18	121,115,203,184,261,180,78,169,145,211,106,158,68,69,245,170,243,2363,	0,246,768,1199,1669,3102,3972,4246,5270,5516,6702,7077,8240,8762,9156,9985,10242,11337,
#Partially deleted in new
chr7	44756187	44768694	chr7:44756187-44768694	1	+	44756249	44767623	789624	18	112,115,107,184,261,180,78,169,145,211,106,158,68,69,245,170,243,1179,	0,237,855,1190,1660,3093,3963,4237,5261,5507,6693,7068,8231,8753,9147,9976,10233,11328,
#Deleted in new
chr7	44756187	44756992	chr7:44756187-44756992	0	+	44756187	44756187	8553170	2	112,568,	0,237,
#Partially deleted in new
chr7	44756204	44768536	chr7:44756204-44768536	1	+	44756249	44767623	789624	17	95,115,203,184,261,180,169,145,211,106,158,68,69,245,170,243,1021,	0,220,742,1173,1643,3076,4220,5244,5490,6676,7051,8214,8736,9130,9959,10216,11311,
#Partially deleted in new
chr7	44756249	44767623	chr7:44756249-44767623	1	+	44756249	44767623	789624	20	50,115,203,184,261,180,78,169,145,163,21,36,106,158,68,69,245,170,243,108,	0,175,697,1128,1598,3031,3901,4175,5199,5445,5610,5633,6631,7006,8169,8691,9085,9914,10171,11266,
#Partially deleted in new
chr7	44759733	44768688	chr7:44759733-44768688	0	+	44759733	44759733	8553170	10	860,457,106,158,68,69,245,170,243,1173,	0,1715,3147,3522,4685,5207,5601,6430,6687,7782,
#Partially deleted in new
chr7	44759950	44768697	chr7:44759950-44768697	0	+	44759950	44759950	8553170	11	643,145,211,106,158,68,69,245,170,243,1182,	0,1498,1744,2930,3305,4468,4990,5384,6213,6470,7565,
#Partially deleted in new
chr7	44761807	44765725	chr7:44761807-44765725	0	+	44761807	44761807	8553170	6	98,106,158,68,69,391,	0,1073,1448,2611,3133,3527,
#Partially deleted in new
chr7	44763688	44765517	chr7:44763688-44765517	0	+	44763688	44763688	8553170	4	62,68,69,183,	0,730,1252,1646,
#Deleted in new
chr7	44765710	44767617	chr7:44765710-44767617	0	+	44765710	44765710	8553170	4	346,170,243,102,	0,453,710,1805,
#Deleted in new
chr7	44765743	44766554	chr7:44765743-44766554	0	+	44765743	44765743	8553170	2	590,134,	0,677,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	44785049	44787340	chr7:44785049-44787340	3	-	44785049	44785049	8553170	2	205,217,	0,2074,
#Partially deleted in new
chr7	44796679	44800011	chr7:44796679-44800011	1	+	44796724	44799878	789624	4	114,31,89,310,	0,2567,2712,3022,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	44796679	44803117	chr7:44796679-44803117	3	+	44796724	44801422	0	5	114,31,89,173,1831,	0,2567,2712,3022,4607,
#Partially deleted in new
chr7	44796679	44799816	chr7:44796679-44799816	0	+	44796679	44796679	8553170	3	114,31,425,	0,2567,2712,
#Partially deleted in new
chr7	44796680	44801631	chr7:44796680-44801631	1	+	44799471	44801422	0	6	113,67,31,89,173,345,	0,2067,2566,2711,3021,4606,
#Partially deleted in new
chr7	44796680	44824564	chr7:44796680-44824564	0	+	44796724	44823182	789624	4	113,65,236,138,	0,25313,26459,27746,
#Partially deleted in new
chr7	44796680	44801630	chr7:44796680-44801630	1	+	44799471	44801422	0	6	113,157,31,89,173,344,	0,2067,2566,2711,3021,4606,
#Partially deleted in new
chr7	44796680	44801631	chr7:44796680-44801631	1	+	44799471	44801422	0	5	113,104,92,173,345,	0,2067,2708,3021,4606,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	44796681	44801624	chr7:44796681-44801624	0	+	44796724	44800424	789624	6	112,31,89,173,120,338,	0,2565,2710,3020,3742,4605,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	44797972	44801647	chr7:44797972-44801647	0	+	44797972	44797972	8553170	3	1305,483,361,	0,1419,3314,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	44798813	44801624	chr7:44798813-44801624	0	+	44798813	44798813	8553170	6	91,31,89,173,120,338,	0,433,578,888,1610,2473,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	44826790	44848077	chr7:44826790-44848077	1	-	44830143	44847971	0	5	3373,130,114,78,109,	0,8738,14108,16486,21178,
#Partially deleted in new
chr7	44829896	44848082	chr7:44829896-44848082	1	-	44830143	44847971	789624	4	267,130,78,114,	0,5632,13380,18072,
#Partially deleted in new
chr7	44834227	44848063	chr7:44834227-44848063	3	-	44834500	44847971	0	5	335,130,114,78,95,	0,1301,6671,9049,13741,
#Partially deleted in new
chr7	44834227	44848021	chr7:44834227-44848021	1	-	44834500	44847971	0	4	335,130,78,53,	0,1301,9049,13741,
#Partially deleted in new
chr7	44834227	44848076	chr7:44834227-44848076	1	-	44834500	44847971	0	4	335,130,114,108,	0,1301,6671,13741,
#Partially deleted in new
chr7	44834238	44848080	chr7:44834238-44848080	1	-	44834556	44847971	0	4	324,114,78,112,	0,6660,9038,13730,
#Partially deleted in new
chr7	44834309	44848040	chr7:44834309-44848040	1	-	44834556	44847971	789624	3	253,114,72,	0,6589,13659,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	44834924	44848083	chr7:44834924-44848083	1	-	44835484	44847971	789624	4	734,114,78,115,	0,5974,8352,13044,
#Partially deleted in new
chr7	44848415	44849568	chr7:44848415-44849568	0	+	44848415	44848415	8553170	2	78,110,	0,1043,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	44849058	44849565	chr7:44849058-44849565	3	+	44849058	44849058	8553170	2	174,107,	0,400,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	44876292	44885361	chr7:44876292-44885361	3	-	44884409	44885348	789624	1	9069,	0,
#Deleted in new
chr7	44881747	44881800	chr7:44881747-44881800	3	-	44881747	44881747	5263520	1	53,	0,
#Deleted in new
chr7	44884952	44886393	chr7:44884952-44886393	3	+	44884952	44884952	8553170	1	1441,	0,
#Partially deleted in new
chr7	44919668	44920329	chr7:44919668-44920329	7	+	44919668	44919668	16724991	2	150,199,	0,462,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	44958998	44960909	chr7:44958998-44960909	3	-	44958998	44958998	8553170	1	1911,	0,
#Partially deleted in new
chr7	44962661	44979079	chr7:44962661-44979079	0	-	44962661	44962661	8553170	21	234,155,114,105,145,224,766,133,75,71,171,115,146,225,117,160,54,166,94,209,213,	0,308,1387,1753,2283,2975,3411,4943,5222,6751,7043,7378,7930,8173,9011,9453,12512,12822,13902,14201,16205,
#Partially deleted in new
chr7	44962661	44979069	chr7:44962661-44979069	0	-	44976623	44978961	789624	21	234,155,114,105,145,224,208,167,133,75,71,171,115,146,225,117,111,54,166,94,203,	0,308,1387,1753,2283,2975,3411,4010,4943,5222,6751,7043,7378,7930,8173,9011,9453,12512,12822,13902,16205,
#Partially deleted in new
chr7	44962665	44979098	chr7:44962665-44979098	3	-	44962738	44978961	789624	22	230,155,114,105,145,224,208,167,133,75,71,171,115,146,225,117,111,54,166,94,209,232,	0,304,1383,1749,2279,2971,3407,4006,4939,5218,6747,7039,7374,7926,8169,9007,9449,12508,12818,13898,14197,16201,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	44962665	44975215	chr7:44962665-44975215	0	-	44962665	44962665	8553170	16	230,1193,105,145,224,766,133,75,564,171,115,146,225,117,111,42,	0,304,1749,2279,2971,3407,4939,5218,6254,7039,7374,7926,8169,9007,9449,12508,
#Partially deleted in new
chr7	44962665	44975106	chr7:44962665-44975106	0	-	44962665	44962665	8553170	17	230,155,114,105,145,224,208,167,133,75,71,171,115,146,225,117,2992,	0,304,1383,1749,2279,2971,3407,4006,4939,5218,6747,7039,7374,7926,8169,9007,9449,
#Partially deleted in new
chr7	44962855	44979033	chr7:44962855-44979033	1	-	44962965	44978961	8553170	21	269,114,105,145,224,208,167,133,75,71,171,115,146,225,117,111,54,166,94,209,167,	0,1193,1559,2089,2781,3217,3816,4749,5028,6557,6849,7184,7736,7979,8817,9259,12318,12628,13708,14007,16011,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	44968522	44979088	chr7:44968522-44979088	0	-	44972218	44978961	789624	12	961,171,115,146,225,117,111,54,174,94,209,222,	0,1182,1517,2069,2312,3150,3592,6651,6953,8041,8340,10344,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	44968522	44979000	chr7:44968522-44979000	0	-	44968522	44968522	8553170	10	1353,115,146,225,117,3113,166,94,209,134,	0,1517,2069,2312,3150,3592,6961,8041,8340,10344,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	44983022	44986637	chr7:44983022-44986637	1	-	44983022	44983022	8553170	2	300,2816,	0,799,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	44983022	44986834	chr7:44983022-44986834	3	-	44983022	44983022	789624	5	300,225,70,77,310,	0,799,1334,2998,3502,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	44983025	44986656	chr7:44983025-44986656	0	-	44983025	44983025	789624	4	297,225,77,132,	0,796,2995,3499,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	44983025	44986669	chr7:44983025-44986669	1	-	44983025	44983025	789624	5	297,225,70,216,145,	0,796,1331,2856,3499,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	44983033	44986650	chr7:44983033-44986650	1	-	44983033	44983033	789624	4	289,225,70,126,	0,788,1323,3491,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	44983084	44986570	chr7:44983084-44986570	1	-	44983084	44983084	8553170	3	238,225,46,	0,737,3440,
#Partially deleted in new
chr7	44983136	44986560	chr7:44983136-44986560	1	-	44983136	44983136	8553170	5	186,136,70,77,36,	0,685,1220,2884,3388,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	44983614	44986674	chr7:44983614-44986674	1	-	44983614	44983614	8553170	3	812,77,150,	0,2406,2910,
#Partially deleted in new
chr7	44983846	44986668	chr7:44983846-44986668	1	-	44983846	44983846	8553170	4	111,70,216,144,	0,510,2035,2678,
#Deleted in new
chr7	44985377	44985510	chr7:44985377-44985510	3	-	44985377	44985377	789624	1	133,	0,
#Deleted in new
chr7	44985461	44986961	chr7:44985461-44986961	1	-	44985461	44985461	8553170	2	636,437,	0,1063,
#Partially deleted in new
chr7	44999474	45076352	chr7:44999474-45076352	0	+	44999474	44999474	789624	10	383,174,84,184,137,136,58,112,139,576,	0,38778,64443,64988,68968,70351,73251,73985,74795,76302,
#Partially deleted in new
chr7	45000184	45076467	chr7:45000184-45076467	3	+	45000333	45076057	0	10	179,174,84,184,137,136,58,112,139,691,	0,38068,63733,64278,68258,69641,72541,73275,74085,75592,
#Partially deleted in new
chr7	45000187	45076469	chr7:45000187-45076469	1	+	45000333	45076057	0	9	176,84,184,137,136,58,112,139,693,	0,63730,64275,68255,69638,72538,73272,74082,75589,
#Partially deleted in new
chr7	45000187	45076469	chr7:45000187-45076469	1	+	45000333	45076057	0	8	176,174,84,184,58,112,139,693,	0,38065,63730,64275,72538,73272,74082,75589,
#Partially deleted in new
chr7	45000188	45073519	chr7:45000188-45073519	0	+	45000188	45000188	8553170	8	175,66,174,84,184,136,58,60,	0,29255,38064,63729,64274,69637,72537,73271,
#Partially deleted in new
chr7	45000248	45076414	chr7:45000248-45076414	0	+	45000333	45073530	789624	9	115,174,84,184,137,136,112,139,638,	0,38004,63669,64214,68194,69577,73211,74021,75528,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	45000299	45076408	chr7:45000299-45076408	0	+	45000333	45070119	8553170	12	64,174,84,184,137,136,75,1484,58,112,139,632,	0,37953,63618,64163,68143,69526,69794,70089,72426,73160,73970,75477,
#Partially deleted in new
chr7	45027014	45064494	chr7:45027014-45064494	0	+	45027014	45027014	8553170	4	252,174,84,32,	0,11238,36903,37448,
#Partially deleted in new
chr7	45027025	45076451	chr7:45027025-45076451	1	+	45027785	45076057	789624	10	772,174,84,184,137,136,58,112,139,675,	0,11227,36892,37437,41417,42800,45700,46434,47244,48751,
#Partially deleted in new
chr7	45027633	45076469	chr7:45027633-45076469	1	+	45027704	45076057	0	10	164,174,84,184,137,136,58,112,139,693,	0,10619,36284,36829,40809,42192,45092,45826,46636,48143,
#Partially deleted in new
chr7	45027671	45076431	chr7:45027671-45076431	1	+	45027785	45076057	789624	8	126,174,84,184,58,112,139,655,	0,10581,36246,36791,45054,45788,46598,48105,
#Partially deleted in new
chr7	45027671	45073288	chr7:45027671-45073288	0	+	45027671	45027671	8553170	5	126,174,137,136,563,	0,10581,40771,42154,45054,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	45027671	45071180	chr7:45027671-45071180	0	+	45027671	45027671	8553170	6	126,84,184,137,136,792,	0,36246,36791,40771,42154,42717,
#Partially deleted in new
chr7	45027671	45073166	chr7:45027671-45073166	0	+	45027671	45027671	8553170	5	126,174,184,136,441,	0,10581,36791,42154,45054,
#Partially deleted in new
chr7	45027700	45070557	chr7:45027700-45070557	0	+	45027700	45027700	8553170	7	97,174,84,184,137,136,169,	0,10552,36217,36762,40742,42125,42688,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	45064602	45076453	chr7:45064602-45076453	0	+	45064602	45064602	8553170	3	44,4583,677,	0,5223,11174,
#Partially deleted in new
chr7	45067635	45076437	chr7:45067635-45076437	0	+	45067635	45067635	8553170	6	944,136,58,112,139,661,	0,2190,5090,5824,6634,8141,
#Partially deleted in new
chr7	45068493	45072786	chr7:45068493-45072786	0	+	45068493	45072786	789624	4	86,136,123,61,	0,1332,3256,4232,
#Deleted in new
chr7	45072337	45073562	chr7:45072337-45073562	0	+	45072337	45072337	8553170	2	446,103,	0,1122,
#Deleted in new
chr7	45080437	45088914	chr7:45080437-45088914	3	-	45080508	45088894	789624	8	86,123,147,147,72,113,4005,87,	0,202,438,679,1163,1317,1670,8390,
#Deleted in new
chr7	45080978	45081400	chr7:45080978-45081400	0	-	45080978	45080978	8553170	2	44,284,	0,138,
#Partially deleted in new
chr7	45100099	45111714	chr7:45100099-45111714	3	-	45100324	45109237	789624	11	327,115,112,246,145,111,158,172,324,461,72,	0,1158,1403,1725,2247,3233,3999,4438,5341,8727,11543,
#Partially deleted in new
chr7	45100099	45111718	chr7:45100099-45111718	1	-	45100324	45109237	789624	9	327,115,112,246,145,111,324,461,76,	0,1158,1403,1725,2247,3233,5341,8727,11543,
#Partially deleted in new
chr7	45100099	45112047	chr7:45100099-45112047	1	-	45100324	45109237	789624	9	327,115,112,246,145,111,324,461,384,	0,1158,1403,1725,2247,3233,5341,8727,11564,
#Partially deleted in new
chr7	45100100	45111706	chr7:45100100-45111706	1	-	45100324	45109237	789624	11	326,115,112,246,145,111,158,172,324,417,64,	0,1157,1402,1724,2246,3232,3998,4437,5340,8726,11542,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	45100100	45107464	chr7:45100100-45107464	0	-	45100100	45100100	8553170	9	326,115,112,246,145,111,158,172,2024,	0,1157,1402,1724,2246,3232,3998,4437,5340,
#Deleted in new
chr7	45101502	45104240	chr7:45101502-45104240	0	-	45101502	45104240	789624	5	112,246,211,111,142,	0,322,778,1830,2596,
#Deleted in new
chr7	45101599	45102571	chr7:45101599-45102571	0	-	45101599	45101599	8553170	3	15,246,225,	0,225,747,
#Deleted in new
chr7	45101773	45102690	chr7:45101773-45102690	0	-	45101773	45101773	8553170	2	297,344,	0,573,
#Deleted in new
chr7	45103030	45105669	chr7:45103030-45105669	0	-	45103030	45103030	8553170	4	413,158,172,229,	0,1068,1507,2410,
#Deleted in new
chr7	45103631	45105478	chr7:45103631-45105478	0	-	45103631	45103631	8553170	3	625,172,38,	0,906,1809,
#Partially deleted in new
chr7	45104208	45111708	chr7:45104208-45111708	0	-	45104208	45109237	789624	5	48,172,324,356,45,	0,329,1232,4723,7455,
#Deleted in new
chr7	45104348	45104482	chr7:45104348-45104482	3	-	45104348	45104348	789624	1	134,	0,
#Partially deleted in new
chr7	45104537	45111680	chr7:45104537-45111680	0	-	45104537	45109075	789624	5	172,324,257,65,38,	0,903,4289,4685,7105,
#Deleted in new
chr7	45104905	45105042	chr7:45104905-45105042	3	-	45104905	45104905	789624	1	137,	0,
#Partially deleted in new
chr7	45105285	45108943	chr7:45105285-45108943	0	-	45105285	45105285	8553170	2	479,117,	0,3541,
#Deleted in new
chr7	45105967	45106099	chr7:45105967-45106099	3	-	45105967	45105967	789624	1	132,	0,
#Partially deleted in new
chr7	45107750	45111697	chr7:45107750-45111697	0	-	45107750	45107750	8553170	3	28,461,55,	0,1076,3892,
#Partially deleted in new
chr7	45108853	45112021	chr7:45108853-45112021	0	-	45108853	45109237	789624	2	434,145,	0,3023,
#Partially deleted in new
chr7	45108883	45111501	chr7:45108883-45111501	0	-	45108883	45109237	789624	2	404,126,	0,2492,
#Partially deleted in new
chr7	45108927	45111697	chr7:45108927-45111697	0	-	45108927	45109237	789624	3	360,133,55,	0,1817,2715,
#Partially deleted in new
chr7	45157790	45184250	chr7:45157790-45184250	1	+	45157828	45183412	789624	3	96,133,1094,	0,19518,25366,
#Partially deleted in new
chr7	45157828	45186302	chr7:45157828-45186302	3	+	45157828	45183412	789624	4	58,133,264,104,	0,19480,25328,28370,
#Partially deleted in new
chr7	45157828	45186298	chr7:45157828-45186298	1	+	45157828	45186211	789624	4	58,133,252,100,	0,19480,25328,28370,
#Deleted in new
chr7	45303619	45304362	chr7:45303619-45304362	7	+	45303619	45303619	16724991	2	118,519,	0,224,
#Partially deleted in new
chr7	45391625	45392205	chr7:45391625-45392205	7	-	45391625	45391625	16724991	1	580,	0,
#Partially deleted in new
chr7	45460711	45542182	chr7:45460711-45542182	3	+	45460711	45460711	8553170	3	259,100,183,	0,68725,81288,
#Deleted in new
chr7	45534522	45534681	chr7:45534522-45534681	7	-	45534522	45534522	16724991	1	159,	0,
#Partially deleted in new
chr7	45574139	45664672	chr7:45574139-45664672	1	+	45592794	45664375	789624	10	49,294,150,119,112,128,159,142,156,384,	0,749,18619,36239,48492,74530,83587,85902,87919,90149,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr7	45574521	45723116	chr7:45574521-45723116	3	+	45574543	45713995	789624	20	661,150,119,112,128,159,142,156,195,98,85,90,254,127,117,147,99,115,125,9424,	0,18237,35857,48110,74148,83205,85520,87537,103347,103644,105187,110457,111440,112025,128854,129078,129996,133828,136006,139171,
#Partially deleted in new
chr7	45574884	45664671	chr7:45574884-45664671	1	+	45592794	45664375	789624	9	298,150,119,112,128,159,142,156,383,	0,17874,35494,47747,73785,82842,85157,87174,89404,
#Partially deleted in new
chr7	45648708	45680642	chr7:45648708-45680642	0	+	45648708	45648708	8553170	8	89,159,142,156,195,98,85,282,	0,9018,11333,13350,29160,29457,31000,31652,
#Partially deleted in new
chr7	45684384	45686040	chr7:45684384-45686040	0	+	45684384	45684384	8553170	2	684,79,	0,1577,
#Partially deleted in new
chr7	45723779	45728310	chr7:45723779-45728310	5	-	45723779	45723779	16724991	3	244,128,133,	0,573,4398,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	45723786	45768954	chr7:45723786-45768954	4	-	45723786	45723786	16724991	14	237,1363,53,136,124,52,122,97,89,118,84,135,101,295,	0,566,2397,4391,13000,21210,23040,23428,24839,27742,33122,34256,35287,44873,
#Partially deleted in new
chr7	45723787	45758177	chr7:45723787-45758177	4	-	45723787	45723787	16724991	11	236,128,53,136,124,52,97,89,118,84,135,	0,565,2396,4390,12999,21209,23427,24838,27741,33121,34255,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	45724049	45768964	chr7:45724049-45768964	4	-	45724049	45724049	16724991	13	431,53,136,195,124,52,97,89,118,84,135,101,305,	0,2134,4128,4782,12737,20947,23165,24576,27479,32859,33993,35024,44610,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	45726044	45728990	chr7:45726044-45728990	4	-	45726044	45726044	16724991	3	192,136,159,	0,2133,2787,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	45727826	45748664	chr7:45727826-45748664	4	-	45727826	45727826	16724991	5	487,124,52,97,39,	0,8960,17170,19388,20799,
#Partially deleted in new
chr7	45736786	45765812	chr7:45736786-45765812	7	-	45736786	45736786	16724991	8	124,52,97,89,118,135,101,107,	0,8210,10428,11839,14742,21256,22287,28919,
#Partially deleted in new
chr7	45757983	45759472	chr7:45757983-45759472	4	-	45757983	45757983	16724991	2	194,399,	0,1090,
#Partially deleted in new
chr7	45758110	45768985	chr7:45758110-45768985	5	-	45758110	45758110	16724991	4	67,101,107,326,	0,963,7595,10549,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr7	45769104	45815263	chr7:45769104-45815263	7	+	45769104	45769104	16724991	17	363,110,132,216,66,59,270,236,65,124,98,197,169,119,191,58,7774,	0,4459,5655,9082,10170,12390,13540,19614,22683,25970,27938,28373,29434,35127,35994,38235,38385,
#Partially deleted in new
chr7	45773594	45783157	chr7:45773594-45783157	5	+	45773594	45773594	16724991	5	79,66,59,95,87,	0,5680,7900,9050,9476,
#Partially deleted in new
chr7	45789584	45789688	chr7:45789584-45789688	3	+	45789584	45789584	8553170	1	104,	0,
#Partially deleted in new
chr7	45816215	45819016	chr7:45816215-45819016	7	-	45816215	45816215	16724991	1	2801,	0,
#Partially deleted in new
chr7	45816556	45821064	chr7:45816556-45821064	7	+	45816556	45816556	16724991	2	206,143,	0,4365,
#Partially deleted in new
chr7	45818581	45819097	chr7:45818581-45819097	7	+	45818581	45818581	16724991	1	516,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	45843633	45843740	chr7:45843633-45843740	3	+	45843633	45843633	8553170	1	107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	45859993	45873082	chr7:45859993-45873082	3	-	45863084	45873007	789624	3	3178,459,93,	0,6042,12996,
#Partially deleted in new
chr7	45888356	45893668	chr7:45888356-45893668	3	+	45888652	45893091	0	4	645,170,129,709,	0,2191,3575,4603,
#Partially deleted in new
chr7	45888359	45893625	chr7:45888359-45893625	1	+	45888652	45893091	789624	4	642,170,129,660,	0,2188,3572,4606,
#Partially deleted in new
chr7	45888496	45893653	chr7:45888496-45893653	1	+	45888652	45893091	789624	3	505,170,694,	0,2051,4463,
#Partially deleted in new
chr7	45912244	45921272	chr7:45912244-45921272	1	-	45914819	45921140	789624	6	1590,141,120,227,103,141,	0,2560,4303,4968,8493,8887,
#Partially deleted in new
chr7	45912250	45921140	chr7:45912250-45921140	1	-	45914819	45921140	789624	6	1584,141,120,227,292,48,	0,2554,4297,4962,8487,8842,
#Partially deleted in new
chr7	45912597	45921274	chr7:45912597-45921274	3	-	45914819	45921140	789624	5	1237,141,120,227,537,	0,2207,3950,4615,8140,
#Partially deleted in new
chr7	45913772	45915325	chr7:45913772-45915325	0	-	45913772	45913772	8553170	2	62,521,	0,1032,
#Partially deleted in new
chr7	45913804	45921251	chr7:45913804-45921251	1	-	45914819	45921140	789624	5	30,141,120,227,532,	0,1000,2743,3408,6915,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	45914100	45917397	chr7:45914100-45917397	0	-	45914819	45917397	789624	4	448,141,120,185,	0,704,2447,3112,
#Deleted in new
chr7	45914469	45917426	chr7:45914469-45917426	0	-	45914819	45917426	789624	3	476,120,214,	0,2078,2743,
#Deleted in new
chr7	45914819	45921140	chr7:45914819-45921140	1	-	45914819	45921140	789624	6	126,120,227,283,3,33,	0,1728,2393,5918,6206,6288,
#Deleted in new
chr7	45916571	45921874	chr7:45916571-45921874	0	-	45916571	45921699	789624	3	96,227,248,	0,641,5055,
#Deleted in new
chr7	45916620	45920415	chr7:45916620-45920415	0	-	45916620	45916620	8553170	3	47,227,389,	0,592,3406,
#Deleted in new
chr7	45916995	45920867	chr7:45916995-45920867	0	-	45916995	45916995	8553170	2	444,130,	0,3742,
#Partially deleted in new
chr7	45969656	45980191	chr7:45969656-45980191	3	+	45969656	45969656	8553170	3	153,119,283,	0,8693,10252,
#Partially deleted in new
chr7	45990904	46000898	chr7:45990904-46000898	3	+	45990904	45990904	8553170	2	173,359,	0,9635,
#Deleted in new
chr7	45997539	45998071	chr7:45997539-45998071	7	-	45997539	45997539	16724991	1	532,	0,
#Deleted in new
chr7	45999620	46000778	chr7:45999620-46000778	7	-	45999620	45999620	16724991	1	1158,	0,
#Deleted in new
chr7	46144936	46145688	chr7:46144936-46145688	7	+	46144936	46144936	16724991	1	752,	0,
#Partially deleted in new
chr7	46261063	46294469	chr7:46261063-46294469	3	+	46261063	46261063	8553170	4	50,176,45,253,	0,2836,16408,33153,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	46302119	46343621	chr7:46302119-46343621	3	+	46302119	46302119	8553170	2	49,190,	0,41312,
#Partially deleted in new
chr7	46476456	46477940	chr7:46476456-46477940	3	-	46476456	46476456	8553170	2	131,98,	0,1386,
#Partially deleted in new
chr7	46477821	46481578	chr7:46477821-46481578	3	-	46477821	46477821	8553170	3	122,85,333,	0,1789,3424,
#Deleted in new
chr7	46634613	46634946	chr7:46634613-46634946	7	+	46634613	46634613	16724991	1	333,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	46687878	46697122	chr7:46687878-46697122	1	-	46687878	46687878	789624	3	1668,159,120,	0,4932,9124,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	46688939	46759844	chr7:46688939-46759844	0	-	46688939	46688939	8553170	3	607,159,103,	0,3871,70802,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	46781372	46783443	chr7:46781372-46783443	7	+	46781372	46781372	16724991	1	2071,	0,
#Deleted in new
chr7	46782799	46783135	chr7:46782799-46783135	5	+	46782799	46782799	16724991	1	336,	0,
#Partially deleted in new
chr7	46890624	46900932	chr7:46890624-46900932	1	-	46890624	46890624	8553170	2	156,204,	0,10104,
#Partially deleted in new
chr7	46890626	47049678	chr7:46890626-47049678	3	-	46890626	46890626	8553170	3	154,64,237,	0,46807,158815,
#Partially deleted in new
chr7	46969701	46983429	chr7:46969701-46983429	1	+	46969701	46969701	8553170	4	212,109,91,419,	0,2575,12511,13309,
#Partially deleted in new
chr7	46969715	47027481	chr7:46969715-47027481	3	+	46969715	46969715	8553170	4	198,109,110,289,	0,2561,56421,57477,
#Partially deleted in new
chr7	46969720	46972692	chr7:46969720-46972692	0	+	46969720	46969720	8553170	2	193,416,	0,2556,
#Partially deleted in new
chr7	47000619	47079113	chr7:47000619-47079113	0	-	47000619	47000619	8553170	4	152,60,97,37,	0,682,37339,78457,
#Partially deleted in new
chr7	47000620	47079128	chr7:47000620-47079128	3	-	47000620	47000620	8553170	4	151,60,169,52,	0,681,25634,78456,
#Deleted in new
chr7	47026127	47026570	chr7:47026127-47026570	7	-	47026127	47026127	16724991	1	443,	0,
#Deleted in new
chr7	47052792	47053674	chr7:47052792-47053674	7	+	47052792	47052792	16724991	1	882,	0,
#Partially deleted in new
chr7	47275153	47582144	chr7:47275153-47582144	3	-	47278075	47439636	789624	31	3067,27,69,169,78,78,96,132,87,635,172,84,115,170,1257,105,66,130,76,61,113,84,65,123,51,172,53,39,38,112,94,	0,5010,5132,8543,16801,17674,18579,21928,27032,27796,29678,69601,69770,71033,93211,121646,125239,125631,136573,138783,139940,148947,153158,160128,162109,164333,166849,205949,231753,253882,306897,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	47275153	47280318	chr7:47275153-47280318	0	-	47280159	47280318	789624	2	5037,33,	0,5132,
#Partially deleted in new
chr7	47302966	47582558	chr7:47302966-47582558	0	-	47302966	47582471	789624	22	618,172,84,115,170,1257,105,66,130,76,61,113,84,65,123,51,172,53,39,38,112,132,	0,1865,41788,41957,43220,65398,93833,97426,97818,108760,110970,112127,121134,125345,132315,134296,136520,139036,178136,203940,226069,279460,
#Partially deleted in new
chr7	47369280	47539277	chr7:47369280-47539277	0	-	47369280	47539077	789624	17	341,105,66,130,76,61,113,84,65,123,51,172,53,39,38,112,203,	0,27519,31112,31504,42446,44656,45813,54820,59031,66001,67982,70206,72722,111822,137626,159755,169794,
#Partially deleted in new
chr7	47369496	47403425	chr7:47369496-47403425	0	-	47369496	47369496	8553170	5	125,105,66,130,158,	0,27303,30896,31288,33771,
#Partially deleted in new
chr7	47396593	47400438	chr7:47396593-47400438	0	-	47396593	47396593	8553170	2	311,46,	0,3799,
#Partially deleted in new
chr7	47400900	47539601	chr7:47400900-47539601	1	-	47405529	47439636	789624	15	14,62,76,61,113,84,65,123,51,172,53,39,38,112,103,	0,4597,10826,13036,14193,23200,27411,34381,36362,38586,41102,80202,106006,128135,138598,
#Partially deleted in new
chr7	47405493	47539601	chr7:47405493-47539601	1	-	47405529	47439636	789624	14	66,76,61,113,84,65,123,51,172,53,39,38,112,103,	0,6233,8443,9600,18607,22818,29788,31769,33993,36509,75609,101413,123542,134005,
#Partially deleted in new
chr7	47424158	47481285	chr7:47424158-47481285	0	-	47424158	47439636	789624	8	26,65,123,51,172,53,39,41,	0,4153,11123,13104,15328,17844,56944,57086,
#Partially deleted in new
chr7	47435281	47453231	chr7:47435281-47453231	0	-	47435281	47439636	789624	5	123,51,172,53,299,	0,1981,4205,6721,17651,
#Partially deleted in new
chr7	47439642	47581631	chr7:47439642-47581631	0	-	47439642	47557120	789624	7	16,53,39,38,112,114,188,	0,2360,41460,67264,89393,117394,141801,
#Partially deleted in new
chr7	47579169	47582099	chr7:47579169-47582099	0	-	47579169	47579169	8553170	2	726,49,	0,2881,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	47621938	47629893	chr7:47621938-47629893	3	+	47621938	47621938	789624	4	399,623,542,1197,	0,1173,5322,6758,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	47655243	47661648	chr7:47655243-47661648	3	+	47655243	47655243	8553170	3	105,64,2742,	0,3449,3663,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	47740201	47812030	chr7:47740201-47812030	0	-	47740763	47812030	8553170	8	712,171,162,231,135,141,105,214,	0,52425,55787,60447,63008,68045,69271,71615,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	47761475	47766772	chr7:47761475-47766772	3	+	47761475	47761475	5263520	3	38,206,944,	0,1897,4353,
#Partially deleted in new
chr7	47774651	47948491	chr7:47774651-47948491	3	-	47775142	47948440	789624	57	515,171,162,231,135,141,105,235,173,84,124,111,119,177,85,136,163,47,73,111,174,217,107,208,84,193,101,158,111,228,213,57,196,112,121,143,78,177,60,369,161,222,182,207,133,240,169,120,174,168,323,218,121,113,125,116,95,	0,17975,21337,25997,28558,33595,34821,37165,38469,39279,40682,46424,52698,54773,55388,56565,58438,59687,60315,60481,62269,64794,65809,68310,70343,72227,78475,80230,80503,82953,84021,90564,91767,99247,101445,102837,106076,107257,109946,111034,113338,115890,119226,123336,127727,129726,130505,131191,133425,140780,154552,156452,157284,162194,165541,168744,173745,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	47795290	47819830	chr7:47795290-47819830	0	+	47795290	47795290	8553170	3	153,170,324,	0,22735,24216,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	47795423	47819847	chr7:47795423-47819847	3	+	47795423	47795423	8553170	4	20,144,170,341,	0,18002,22602,24083,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	47809116	47827466	chr7:47809116-47827466	0	-	47809116	47809116	8553170	7	461,235,173,84,124,111,117,	0,2700,4004,4814,6217,11959,18233,
#Partially deleted in new
chr7	47809409	47813237	chr7:47809409-47813237	0	-	47809436	47813237	789624	3	168,235,117,	0,2407,3711,
#Deleted in new
chr7	47809409	47809762	chr7:47809409-47809762	0	-	47809409	47809409	8553170	2	168,90,	0,263,
#Deleted in new
chr7	47956792	47957318	chr7:47956792-47957318	7	+	47956792	47956792	16724991	1	526,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	47963287	47979543	chr7:47963287-47979543	3	-	47965355	47979519	0	8	2151,120,100,75,108,177,128,76,	0,4518,5931,12325,13442,15129,15401,16180,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	47964319	47979553	chr7:47964319-47979553	0	-	47965355	47978805	0	9	313,139,120,100,75,108,177,128,144,	0,980,3486,4899,11293,12410,14097,14369,15090,
#Partially deleted in new
chr7	47965165	47979553	chr7:47965165-47979553	1	-	47965355	47978805	0	8	273,120,100,75,108,177,128,144,	0,2640,4053,10447,11564,13251,13523,14244,
#Partially deleted in new
chr7	47968818	47978534	chr7:47968818-47978534	0	-	47971501	47978534	789624	5	500,257,75,108,118,	0,2441,6794,7911,9598,
#Partially deleted in new
chr7	47969244	47979504	chr7:47969244-47979504	0	-	47969244	47978805	789624	6	74,75,108,177,156,37,	0,6368,7485,9172,9444,10223,
#Partially deleted in new
chr7	47975612	47978895	chr7:47975612-47978895	0	-	47976340	47978805	789624	5	75,207,108,177,207,	0,602,1117,2804,3076,
#Partially deleted in new
chr7	47975654	47979553	chr7:47975654-47979553	0	-	47975654	47978805	789624	5	33,108,177,128,133,	0,1075,2762,3034,3766,
#Deleted in new
chr7	47978259	47979553	chr7:47978259-47979553	0	-	47978259	47978259	8553170	3	334,128,86,	0,429,1208,
#Partially deleted in new
chr7	47987147	48029098	chr7:47987147-48029098	1	-	47987329	48028938	789624	10	302,93,168,116,85,163,41,104,62,282,	0,1640,7167,8883,18821,20017,21887,30114,38729,41669,
#Partially deleted in new
chr7	47987147	48017308	chr7:47987147-48017308	0	-	47987329	48017308	789624	8	302,93,168,116,85,175,41,47,	0,1640,7167,8883,18821,20005,21887,30114,
#Partially deleted in new
chr7	47987147	47988963	chr7:47987147-47988963	0	-	47987147	47987147	8553170	2	302,176,	0,1640,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	47987147	48000181	chr7:47987147-48000181	0	-	47987147	47987147	8553170	6	302,93,36,168,116,54,	0,1640,3862,7167,8883,12980,
#Partially deleted in new
chr7	47987150	48006011	chr7:47987150-48006011	0	-	47987267	48006011	789624	5	210,93,168,116,43,	0,1637,7164,8880,18818,
#Partially deleted in new
chr7	47987152	48029119	chr7:47987152-48029119	1	-	47987329	48028938	789624	11	297,93,168,116,85,163,41,104,62,128,91,	0,1635,7162,8878,18816,20012,21882,30109,38724,41664,41876,
#Partially deleted in new
chr7	47987329	48009063	chr7:47987329-48009063	0	-	47987329	48009063	789624	8	120,93,36,168,116,85,163,29,	0,1458,3680,6985,8701,18639,19835,21705,
#Partially deleted in new
chr7	47987329	48009063	chr7:47987329-48009063	1	-	47987329	48009063	789624	9	120,75,18,15,180,116,85,163,29,	0,1458,1537,1556,6973,8701,18639,19835,21705,
#Partially deleted in new
chr7	48035510	48061253	chr7:48035510-48061253	1	+	48035511	48060272	789624	9	120,71,186,109,157,98,176,12,1028,	0,782,5823,7970,10949,14369,17237,19084,24715,
#Partially deleted in new
chr7	48035510	48061304	chr7:48035510-48061304	1	+	48035511	48060272	789624	9	120,71,186,109,157,98,224,12,1079,	0,782,5823,7970,10949,14369,17189,19084,24715,
#Partially deleted in new
chr7	48035510	48061304	chr7:48035510-48061304	1	+	48046475	48060272	789624	7	120,186,109,157,98,176,1079,	0,5823,7970,10949,14369,17237,24715,
#Partially deleted in new
chr7	48035510	48061294	chr7:48035510-48061294	1	+	48046475	48060272	789624	8	120,186,109,157,98,176,12,1069,	0,5823,7970,10949,14369,17237,19084,24715,
#Partially deleted in new
chr7	48035519	48061297	chr7:48035519-48061297	3	+	48036308	48060272	789624	9	111,156,186,109,157,98,224,12,1072,	0,688,5814,7961,10940,14360,17180,19075,24706,
#Partially deleted in new
chr7	48035529	48041653	chr7:48035529-48041653	0	+	48035529	48035529	8553170	3	101,71,320,	0,763,5804,
#Partially deleted in new
chr7	48088627	48103407	chr7:48088627-48103407	0	+	48094783	48103407	789624	6	296,115,65,118,159,111,	0,1622,6135,11042,13196,14669,
#Partially deleted in new
chr7	48088643	48108733	chr7:48088643-48108733	3	+	48094783	48108357	0	10	280,207,115,65,118,159,115,210,147,516,	0,568,1606,6119,11026,13180,14653,18229,18717,19574,
#Partially deleted in new
chr7	48088660	48099714	chr7:48088660-48099714	0	+	48094783	48099714	789624	5	248,147,177,65,45,	0,611,1527,6102,11009,
#Partially deleted in new
chr7	48088726	48108302	chr7:48088726-48108302	0	+	48094783	48106939	0	7	182,147,177,65,210,147,85,	0,545,1461,6036,18146,18634,19491,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	48089226	48103991	chr7:48089226-48103991	0	+	48094783	48103861	789624	7	192,115,65,118,159,115,210,	0,1023,5536,10443,12597,14070,14555,
#Partially deleted in new
chr7	48089236	48108419	chr7:48089236-48108419	1	+	48094783	48108357	0	9	182,177,65,118,159,115,210,147,202,	0,951,5526,10433,12587,14060,17636,18124,18981,
#Partially deleted in new
chr7	48089264	48108419	chr7:48089264-48108419	0	+	48094783	48106939	0	6	154,177,65,210,147,202,	0,923,5498,17608,18096,18953,
#Partially deleted in new
chr7	48089264	48103413	chr7:48089264-48103413	0	+	48094783	48103413	789624	7	154,128,177,65,118,159,117,	0,244,923,5498,10405,12559,14032,
#Partially deleted in new
chr7	48089281	48107082	chr7:48089281-48107082	0	+	48094783	48103345	789624	7	137,177,65,118,47,115,210,	0,906,5481,10388,12542,14015,17591,
#Partially deleted in new
chr7	48089343	48108419	chr7:48089343-48108419	0	+	48089343	48089343	789624	7	75,115,65,47,210,147,202,	0,906,5419,12480,17529,18017,18874,
#Partially deleted in new
chr7	48089375	48108419	chr7:48089375-48108419	0	+	48094783	48106939	0	6	43,115,65,210,147,202,	0,874,5387,17497,17985,18842,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	48104645	48108415	chr7:48104645-48108415	0	+	48104645	48104645	8553170	3	2437,147,198,	0,2715,3572,
#Partially deleted in new
chr7	48171457	48272995	chr7:48171457-48272995	0	+	48171483	48234208	789624	18	95,94,124,152,29,164,131,210,165,200,97,128,101,168,206,140,115,1209,	0,21501,26779,47896,49823,55804,58367,62560,67783,69409,71530,73118,74054,74405,76781,77754,97522,100329,
#Boundary problem: need 62, got 0, diff 62, mapped 0.0
chr7	48171459	48647495	chr7:48171459-48647495	3	+	48171483	48645512	789624	62	93,94,124,152,29,164,131,134,165,200,128,101,168,206,140,115,4779,1827,110,119,164,80,122,195,165,178,140,114,91,177,307,115,330,70,132,138,181,219,197,158,231,106,250,90,70,119,88,109,55,178,116,157,254,193,110,151,135,104,93,106,138,2079,	0,21499,26777,47894,49821,55802,58365,62558,67781,69407,73116,74052,74403,76779,77752,97520,100327,106634,109883,116500,124240,125772,126906,138487,141607,142772,145697,163962,166905,179183,180721,196334,200708,202887,204981,216362,217580,220461,232223,239060,240893,256306,283577,295496,300070,309576,311616,317776,334876,336412,339624,345265,348581,352788,356776,408764,415694,423250,443825,471828,473157,473957,
#Partially deleted in new
chr7	48279275	48646283	chr7:48279275-48646283	0	+	48279275	48645512	789624	45	645,110,119,164,80,122,195,165,178,140,114,91,177,307,115,330,70,132,138,181,219,197,158,231,106,250,93,70,119,88,109,55,178,116,157,254,193,110,151,135,104,93,106,138,867,	0,2067,8684,16424,17956,19090,30671,33791,34956,37881,56146,59089,71367,72905,88518,92892,95071,97165,108546,109764,112645,124407,131244,133077,148490,175761,187677,192254,201760,203800,209960,227060,228596,231808,237449,240765,244972,248960,300948,307878,315434,336009,364012,365341,366141,
#Partially deleted in new
chr7	48279275	48627092	chr7:48279275-48627092	0	+	48279275	48279275	8553170	43	645,110,119,164,80,122,195,165,178,140,114,91,177,307,115,330,70,132,138,181,219,197,158,231,106,250,93,70,119,88,109,55,178,116,157,254,193,110,151,135,104,93,491,	0,2067,8684,16424,17956,19090,30671,33791,34956,37881,56146,59089,71367,72905,88518,92892,95071,97165,108546,109764,112645,124407,131244,133077,148490,175761,187677,192254,201760,203800,209960,227060,228596,231808,237449,240765,244972,248960,300948,307878,315434,336009,347326,
#Partially deleted in new
chr7	48313066	48404665	chr7:48313066-48404665	0	+	48313066	48313066	8553170	15	165,178,140,114,91,177,307,115,330,70,132,138,181,219,983,	0,1165,4090,22355,25298,37576,39114,54727,59101,61280,63374,74755,75973,78854,90616,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr7	48455062	48647496	chr7:48455062-48647496	0	+	48455062	48645512	789624	19	224,70,119,88,109,55,178,116,157,254,193,110,151,135,104,93,106,138,2080,	0,16467,25973,28013,34173,51273,52809,56021,61662,64978,69185,73173,125161,132091,139647,160222,188225,189554,190354,
#Partially deleted in new
chr7	48507871	48520145	chr7:48507871-48520145	0	+	48507871	48520145	789624	4	85,116,157,105,	0,3212,8853,12169,
#Partially deleted in new
chr7	48660574	48663305	chr7:48660574-48663305	3	-	48660574	48660574	8553170	2	321,52,	0,2679,
#Partially deleted in new
chr7	48846425	48852898	chr7:48846425-48852898	7	-	48846425	48846425	16724991	4	876,547,147,144,	0,1108,2773,6329,
#Deleted in new
chr7	48847765	48851625	chr7:48847765-48851625	3	+	48847765	48847765	8553170	1	3860,	0,
#Deleted in new
chr7	48902555	48903891	chr7:48902555-48903891	7	-	48902555	48902555	16724991	1	1336,	0,
#Partially deleted in new
chr7	48919764	48926016	chr7:48919764-48926016	3	+	48919764	48926016	8553170	3	140,93,1432,	0,3606,4820,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	48924572	48927454	chr7:48924572-48927454	1	+	48924672	48926016	789624	1	2882,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	49230136	49254816	chr7:49230136-49254816	3	+	49230136	49230136	8553170	4	198,144,200,150,	0,23051,23624,24530,
#Deleted in new
chr7	49258492	49259846	chr7:49258492-49259846	7	-	49258492	49258492	16724991	1	1354,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	49760896	49762764	chr7:49760896-49762764	3	-	49760896	49760896	8553170	1	1868,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	49773660	49921950	chr7:49773660-49921950	3	+	49775435	49912185	789624	4	453,799,130,9917,	0,1672,29050,138373,
#Partially deleted in new
chr7	49937440	50093264	chr7:49937440-50093264	3	-	49937527	50093194	789624	8	182,178,77,219,153,126,81,197,	0,45901,80799,93651,120548,144333,152188,155627,
#Partially deleted in new
chr7	49937527	50093236	chr7:49937527-50093236	1	-	49937527	50093194	789624	8	95,178,77,219,150,126,81,169,	0,45814,80712,93564,120461,144246,152101,155540,
#Deleted in new
chr7	49942250	49944440	chr7:49942250-49944440	7	-	49942250	49942250	16724991	1	2190,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	50081773	50121329	chr7:50081773-50121329	0	-	50081773	50117262	789624	5	126,81,167,189,26,	0,7855,35479,38434,39530,
#Partially deleted in new
chr7	50081859	50093232	chr7:50081859-50093232	0	-	50092966	50093194	789624	3	40,81,370,	0,7769,11003,
#Partially deleted in new
chr7	50096035	50159830	chr7:50096035-50159830	3	+	50096085	50159169	789624	9	603,98,77,139,68,42,108,108,785,	0,8278,33681,38072,40062,44104,45245,55414,63010,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	50141539	50142823	chr7:50141539-50142823	3	-	50141539	50141539	8553170	3	582,80,105,	0,959,1179,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	50202000	50262994	chr7:50202000-50262994	3	-	50202000	50202000	8553170	4	990,166,51,163,	0,1900,57286,60831,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	50202238	50204318	chr7:50202238-50204318	0	-	50202238	50202238	8553170	2	752,56,	0,2024,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	50274789	50275622	chr7:50274789-50275622	3	-	50274789	50274789	8553170	3	192,107,61,	0,563,772,
#Partially deleted in new
chr7	50304067	50368048	chr7:50304067-50368048	0	+	50319061	50368048	789624	4	292,54,120,43,	0,14980,23570,63938,
#Partially deleted in new
chr7	50304082	50399966	chr7:50304082-50399966	0	+	50319061	50399966	789624	6	32,54,120,168,135,49,	0,14965,23555,78457,87646,95835,
#Partially deleted in new
chr7	50304123	50328255	chr7:50304123-50328255	0	+	50304123	50304123	8553170	3	236,54,618,	0,14924,23514,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	50304668	50405101	chr7:50304668-50405101	3	+	50319061	50400627	789624	8	254,54,120,261,168,126,135,5184,	0,14379,22969,71864,77871,82676,87060,95249,
#Partially deleted in new
chr7	50304677	50369601	chr7:50304677-50369601	1	+	50319061	50369535	789624	5	245,54,120,60,80,	0,14370,22960,63328,64844,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	50304715	50405101	chr7:50304715-50405101	1	+	50319061	50400627	789624	8	207,54,120,261,168,126,135,5184,	0,14332,22922,71817,77824,82629,87013,95202,
#Partially deleted in new
chr7	50304727	50369444	chr7:50304727-50369444	1	+	50319061	50368370	789624	4	195,54,120,1439,	0,14320,22910,63278,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	50304781	50405098	chr7:50304781-50405098	1	+	50319061	50400627	789624	7	141,54,120,168,126,135,5181,	0,14266,22856,77758,82563,86947,95136,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	50304781	50405098	chr7:50304781-50405098	1	+	50319061	50400627	789624	3	141,54,5181,	0,14266,95136,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	50304781	50405098	chr7:50304781-50405098	1	+	50319061	50400627	789624	5	141,54,120,261,5181,	0,14266,22856,71751,95136,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	50304781	50405098	chr7:50304781-50405098	1	+	50319061	50400627	789624	6	141,54,120,261,168,5181,	0,14266,22856,71751,77758,95136,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	50304781	50402525	chr7:50304781-50402525	1	+	50319061	50400627	789624	7	141,54,120,261,168,135,2608,	0,14266,22856,71751,77758,86947,95136,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	50304781	50405098	chr7:50304781-50405098	1	+	50319061	50400627	789624	4	141,54,135,5181,	0,14266,86947,95136,
#Partially deleted in new
chr7	50304781	50400627	chr7:50304781-50400627	1	+	50319061	50400627	789624	6	141,54,120,60,74,513,	0,14266,22856,63224,77758,95333,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	50304781	50405098	chr7:50304781-50405098	1	+	50319061	50400627	789624	5	141,54,126,135,5181,	0,14266,82563,86947,95136,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	50308679	50402566	chr7:50308679-50402566	1	+	50319061	50400627	789624	7	227,54,120,261,168,135,2649,	0,10368,18958,67853,73860,83049,91238,
#Partially deleted in new
chr7	50308720	50400876	chr7:50308720-50400876	1	+	50319061	50400627	789624	7	186,54,120,168,126,135,959,	0,10327,18917,73819,78624,83008,91197,
#Partially deleted in new
chr7	50308747	50369699	chr7:50308747-50369699	1	+	50319061	50369535	789624	5	159,54,120,60,178,	0,10300,18890,59258,60774,
#Partially deleted in new
chr7	50308753	50377327	chr7:50308753-50377327	0	+	50308753	50308753	8553170	4	153,54,120,795,	0,10294,18884,67779,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	50318405	50328948	chr7:50318405-50328948	0	+	50318405	50318405	8553170	3	162,54,1311,	0,642,9232,
#Partially deleted in new
chr7	50327378	50400627	chr7:50327378-50400627	0	+	50327378	50327378	8553170	6	379,261,168,126,135,710,	0,49154,55161,59966,64350,72539,
#Partially deleted in new
chr7	50327648	50400009	chr7:50327648-50400009	0	+	50327648	50400009	789624	2	109,92,	0,72269,
#Deleted in new
chr7	50367664	50369704	chr7:50367664-50369704	0	+	50367664	50367664	8553170	2	401,183,	0,1857,
#Deleted in new
chr7	50388488	50400097	chr7:50388488-50400097	3	-	50388488	50388488	8553170	5	91,93,67,62,67,	0,5387,5790,11410,11542,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	50435379	50435486	chr7:50435379-50435486	3	+	50435379	50435379	8553170	1	107,	0,
#Partially deleted in new
chr7	50444127	50450324	chr7:50444127-50450324	1	-	50445262	50447287	0	4	3170,109,168,24,	0,4053,5428,6173,
#Partially deleted in new
chr7	50444128	50450390	chr7:50444128-50450390	1	-	50445262	50447287	0	3	3229,224,90,	0,5371,6172,
#Partially deleted in new
chr7	50444128	50542535	chr7:50444128-50542535	3	-	50445262	50447287	0	2	3169,18,	0,98389,
#Partially deleted in new
chr7	50444128	50450390	chr7:50444128-50450390	1	-	50445262	50447287	0	3	3169,109,90,	0,4052,6172,
#Partially deleted in new
chr7	50444128	50450390	chr7:50444128-50450390	1	-	50445262	50447287	0	2	3169,90,	0,6172,
#Partially deleted in new
chr7	50444132	50450350	chr7:50444132-50450350	1	-	50445262	50447287	0	4	3165,109,161,50,	0,4048,5430,6168,
#Partially deleted in new
chr7	50444476	50450390	chr7:50444476-50450390	1	-	50445262	50447287	0	4	2821,109,606,90,	0,3704,4641,5824,
#Partially deleted in new
chr7	50445141	50449724	chr7:50445141-50449724	1	-	50445262	50447287	0	2	2156,1544,	0,3039,
#Partially deleted in new
chr7	50446786	50450388	chr7:50446786-50450388	1	-	50446968	50447287	789624	4	230,166,109,88,	0,345,1394,3514,
#Partially deleted in new
chr7	50446911	50450090	chr7:50446911-50450090	0	-	50446911	50447287	789624	3	386,109,64,	0,1269,3115,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	50446980	50450368	chr7:50446980-50450368	0	-	50446980	50447287	789624	4	317,88,109,68,	0,987,1200,3320,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	50446994	50449695	chr7:50446994-50449695	0	-	50446994	50447287	789624	4	303,88,109,117,	0,973,1186,2584,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	50447127	50450336	chr7:50447127-50450336	0	-	50447127	50447287	789624	5	170,88,109,179,36,	0,840,1053,2417,3173,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	50447182	50450336	chr7:50447182-50450336	0	-	50447182	50447287	789624	5	115,88,109,224,36,	0,785,998,2317,3118,
#Partially deleted in new
chr7	50458435	50561054	chr7:50458435-50561054	1	-	50463230	50544085	0	15	408,219,102,99,20,77,68,95,67,144,135,120,114,229,41,	0,4777,8778,11637,18188,21351,36914,40712,45557,69701,70772,79424,81479,85449,102578,
#Partially deleted in new
chr7	50458437	50561071	chr7:50458437-50561071	1	-	50463230	50544085	0	13	406,219,102,99,20,77,68,95,67,120,114,229,58,	0,4775,8776,11635,18186,21349,36912,40710,45555,79422,81477,85447,102576,
#Partially deleted in new
chr7	50458437	50561071	chr7:50458437-50561071	1	-	50463230	50544085	789624	14	406,219,102,99,20,77,68,95,67,135,120,114,229,58,	0,4775,8776,11635,18186,21349,36912,40710,45555,70770,79422,81477,85447,102576,
#Partially deleted in new
chr7	50458437	50561071	chr7:50458437-50561071	1	-	50463230	50544085	789624	14	406,219,102,99,20,77,68,95,67,144,135,120,229,58,	0,4775,8776,11635,18186,21349,36912,40710,45555,69699,70770,79422,85447,102576,
#Partially deleted in new
chr7	50458439	50561054	chr7:50458439-50561054	1	-	50463230	50544085	0	13	404,219,102,99,20,77,68,95,67,144,135,229,41,	0,4773,8774,11633,18184,21347,36910,40708,45553,69697,70768,85445,102574,
#Partially deleted in new
chr7	50458439	50544119	chr7:50458439-50544119	1	-	50463230	50544085	0	12	404,219,102,99,20,77,68,95,67,120,114,235,	0,4773,8774,11633,18184,21347,36910,40708,45553,79420,81475,85445,
#Partially deleted in new
chr7	50458439	50561054	chr7:50458439-50561054	0	-	50495394	50544085	789624	13	404,219,102,99,20,77,68,67,144,135,120,229,41,	0,4773,8774,11633,18184,21347,36910,45553,69697,70768,79420,85445,102574,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	50458441	50459684	chr7:50458441-50459684	0	-	50458441	50458441	8553170	2	402,45,	0,1198,
#Partially deleted in new
chr7	50458464	50565457	chr7:50458464-50565457	3	-	50463230	50544085	0	15	379,219,102,99,20,77,68,95,67,144,135,120,114,229,173,	0,4748,8749,11608,18159,21322,36885,40683,45528,69672,70743,79395,81450,85420,106820,
#Partially deleted in new
chr7	50458476	50543982	chr7:50458476-50543982	0	-	50463230	50543982	789624	12	367,219,102,99,20,77,68,95,67,144,114,98,	0,4736,8737,11596,18147,21310,36873,40671,45516,69660,81438,85408,
#Partially deleted in new
chr7	50458569	50479963	chr7:50458569-50479963	0	-	50458569	50458569	8553170	6	274,219,102,99,20,177,	0,4643,8644,11503,18054,21217,
#Partially deleted in new
chr7	50492646	50561048	chr7:50492646-50561048	1	-	50492932	50544085	0	10	359,68,95,67,144,135,120,114,229,35,	0,2703,6501,11346,35490,36561,45213,47268,51238,68367,
#Partially deleted in new
chr7	50527691	50540028	chr7:50527691-50540028	0	-	50527691	50527691	8553170	5	158,144,135,120,114,	0,445,1516,10168,12223,
#Partially deleted in new
chr7	50531758	50543463	chr7:50531758-50543463	3	+	50531758	50531758	789624	5	124,54,315,64,1219,	0,7355,8072,9587,10486,
#Partially deleted in new
chr7	50543993	50564334	chr7:50543993-50564334	0	-	50543993	50544085	789624	2	120,340,	0,20001,
#Partially deleted in new
chr7	50590062	50793462	chr7:50590062-50793462	1	-	50592951	50674623	0	17	3036,94,88,67,117,78,99,111,138,69,116,157,142,223,88,170,239,	0,5374,13935,14248,15227,16274,22678,24707,26147,28008,29107,36759,79659,84373,113758,165824,203161,
#Partially deleted in new
chr7	50590062	50705301	chr7:50590062-50705301	1	-	50592951	50674623	0	16	3036,94,88,67,117,78,99,111,138,69,116,157,142,223,88,162,	0,5374,13935,14248,15227,16274,22678,24707,26147,28008,29107,36759,79659,84373,113758,115077,
#Partially deleted in new
chr7	50590062	50732353	chr7:50590062-50732353	1	-	50592951	50732322	0	16	3036,94,88,67,117,78,99,111,138,69,116,157,142,223,88,82,	0,5374,13935,14248,15227,16274,22678,24707,26147,28008,29107,36759,79659,84373,113758,142209,
#Partially deleted in new
chr7	50590067	50727118	chr7:50590067-50727118	1	-	50592951	50674623	0	16	3031,94,88,67,117,78,99,111,138,69,116,157,142,223,23,207,	0,5369,13930,14243,15222,16269,22673,24702,26142,28003,29102,36754,79654,84368,135945,136844,
#Partially deleted in new
chr7	50590068	50792969	chr7:50590068-50792969	0	-	50710958	50792524	789624	18	3030,94,88,67,117,78,99,111,138,69,116,157,142,223,88,116,170,528,	0,5368,13929,14242,15221,16268,22672,24701,26141,28002,29101,36753,79653,84367,113752,120806,165818,202373,
#Partially deleted in new
chr7	50590078	50726992	chr7:50590078-50726992	1	-	50592951	50674623	0	18	3020,94,88,67,117,78,99,111,138,69,116,157,142,223,88,184,23,81,	0,5358,13919,14232,15211,16258,22662,24691,26131,27992,29091,36743,79643,84357,113742,115061,135934,136833,
#Partially deleted in new
chr7	50591122	50792684	chr7:50591122-50792684	1	-	50592951	50792524	789624	16	1976,94,88,67,117,78,99,111,138,69,116,157,142,223,170,243,	0,4314,12875,13188,14167,15214,21618,23647,25087,26948,28047,35699,78599,83313,164764,201319,
#Partially deleted in new
chr7	50592347	50756064	chr7:50592347-50756064	1	-	50592951	50674623	0	17	751,94,88,67,117,78,99,111,138,69,116,157,142,223,88,184,178,	0,3089,11650,11963,12942,13989,20393,22422,23862,25723,26822,34474,77374,82088,111473,112792,163539,
#Partially deleted in new
chr7	50592579	50732353	chr7:50592579-50732353	1	-	50592951	50732322	0	15	519,94,88,67,117,78,99,111,69,116,157,142,223,88,82,	0,2857,11418,11731,12710,13757,20161,22190,25491,26590,34242,77142,81856,111241,139692,
#Partially deleted in new
chr7	50592579	50782567	chr7:50592579-50782567	3	-	50592951	50732322	0	19	519,94,88,67,117,78,99,111,138,69,116,157,142,223,88,97,170,110,144,	0,2857,11418,11731,12710,13757,20161,22190,23630,25491,26590,34242,77142,81856,111241,139692,163307,188047,189844,
#Partially deleted in new
chr7	50592579	50793436	chr7:50592579-50793436	1	-	50592951	50674623	0	16	519,94,88,67,117,78,99,111,138,69,116,157,142,223,88,213,	0,2857,11418,11731,12710,13757,20161,22190,23630,25491,26590,34242,77142,81856,111241,200644,
#Partially deleted in new
chr7	50592609	50755903	chr7:50592609-50755903	1	-	50592951	50674623	0	19	489,94,88,67,117,78,99,111,138,69,116,157,142,223,88,184,116,97,17,	0,2827,11388,11701,12680,13727,20131,22160,23600,25461,26560,34212,77112,81826,111211,112530,118265,139662,163277,
#Partially deleted in new
chr7	50592762	50782445	chr7:50592762-50782445	1	-	50592951	50674623	0	18	336,94,88,67,117,78,99,111,138,69,116,157,142,223,88,184,170,22,	0,2674,11235,11548,12527,13574,19978,22007,23447,25308,26407,34059,76959,81673,111058,112377,163124,189661,
#Deleted in new
chr7	50592878	50595840	chr7:50592878-50595840	0	-	50592878	50592878	8553170	2	220,404,	0,2558,
#Partially deleted in new
chr7	50592951	50793432	chr7:50592951-50793432	1	-	50592951	50710907	0	18	147,94,88,67,117,78,99,111,138,69,116,157,142,223,88,116,97,209,	0,2485,11046,11359,12338,13385,19789,21818,23258,25119,26218,33870,76770,81484,110869,117923,139320,200272,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	50595469	50607068	chr7:50595469-50607068	0	-	50595469	50595469	8553170	5	61,88,67,117,732,	0,8528,8841,9820,10867,
#Deleted in new
chr7	50604908	50606413	chr7:50604908-50606413	0	-	50604908	50604908	8553170	2	498,77,	0,1428,
#Partially deleted in new
chr7	50617880	50626930	chr7:50617880-50626930	0	-	50618037	50626930	789624	3	259,116,109,	0,1289,8941,
#Partially deleted in new
chr7	50674613	50793437	chr7:50674613-50793437	0	-	50674613	50710907	789624	6	45,88,116,170,110,214,	0,29207,36261,81273,106013,118610,
#Partially deleted in new
chr7	50674650	50793313	chr7:50674650-50793313	0	-	50674650	50674650	8553170	6	8,88,23,98,170,90,	0,29170,51362,53142,81236,118573,
#Partially deleted in new
chr7	50727792	50747664	chr7:50727792-50747664	0	-	50727792	50727792	8553170	4	98,100,97,86,	0,1507,4479,19786,
#Partially deleted in new
chr7	50755886	50782910	chr7:50755886-50782910	0	-	50755886	50755886	8553170	2	170,487,	0,26537,
#Partially deleted in new
chr7	50755891	50781500	chr7:50755891-50781500	0	-	50755891	50755891	8553170	4	165,28,267,84,	0,23243,23617,25525,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	50761657	50779570	chr7:50761657-50779570	0	-	50761657	50761657	8553170	3	357,28,62,	0,17477,17851,
#Deleted in new
chr7	50779456	50781471	chr7:50779456-50781471	0	-	50779456	50779456	8553170	6	135,32,110,109,83,55,	0,287,1170,1564,1769,1960,
#Deleted in new
chr7	50779717	50781430	chr7:50779717-50781430	0	-	50779717	50779717	8553170	3	58,110,410,	0,909,1303,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	50839362	50841992	chr7:50839362-50841992	3	-	50839362	50839362	8553170	2	303,179,	0,2451,
#Deleted in new
chr7	50843577	50843732	chr7:50843577-50843732	7	-	50843577	50843577	16724991	1	155,	0,
#Deleted in new
chr7	50935349	50935493	chr7:50935349-50935493	3	-	50935349	50935349	8553170	1	144,	0,
#Partially deleted in new
chr7	51016211	51316799	chr7:51016211-51316799	3	-	51017550	51316633	0	13	1357,264,120,1880,98,310,139,174,98,229,211,204,207,	0,8897,10334,11500,14600,27171,68954,119946,167890,174638,177167,203529,300381,
#Partially deleted in new
chr7	51016211	51190943	chr7:51016211-51190943	0	-	51017550	51190943	789624	12	1357,264,120,1880,98,310,171,139,174,75,98,94,	0,8897,10334,11500,14600,27171,66846,68954,119946,156244,167890,174638,
#Partially deleted in new
chr7	51016211	51193435	chr7:51016211-51193435	0	-	51017550	51193435	789624	12	1357,123,120,1880,98,310,139,174,75,98,229,57,	0,8897,10334,11500,14600,27171,68954,119946,156244,167890,174638,177167,
#Partially deleted in new
chr7	51016212	51316818	chr7:51016212-51316818	1	-	51017550	51316633	0	14	1356,123,120,1880,98,310,171,139,174,98,229,211,204,226,	0,8896,10333,11499,14599,27170,66845,68953,119945,167889,174637,177166,203528,300380,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	51017279	51035955	chr7:51017279-51035955	0	-	51017279	51017279	8553170	5	289,264,120,1880,5144,	0,7829,9266,10432,13532,
#Partially deleted in new
chr7	51017462	51022990	chr7:51017462-51022990	0	+	51017462	51017462	8553170	3	55,314,393,	0,3509,5135,
#Partially deleted in new
chr7	51029179	51193589	chr7:51029179-51193589	0	-	51029179	51029179	8553170	9	412,98,310,171,139,174,98,229,211,	0,1632,14203,53878,55986,106978,154922,161670,164199,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	51064398	51316818	chr7:51064398-51316818	1	-	51065135	51316633	0	8	1051,139,174,98,229,211,204,226,	0,20767,71759,119703,126451,128980,155342,252194,
#Partially deleted in new
chr7	51070827	51316764	chr7:51070827-51316764	1	-	51073341	51316633	0	8	2558,139,174,98,229,211,204,172,	0,14338,65330,113274,120022,122551,148913,245765,
#Partially deleted in new
chr7	51072715	51316763	chr7:51072715-51316763	1	-	51073341	51316633	789624	9	670,139,174,98,45,229,211,204,171,	0,12450,63442,111386,115198,118134,120663,147025,243877,
#Partially deleted in new
chr7	51083057	51316767	chr7:51083057-51316767	0	-	51083057	51219937	8553170	8	171,139,174,98,229,211,204,175,	0,2108,53100,101044,107792,110321,136683,233535,
#Partially deleted in new
chr7	51190997	51316471	chr7:51190997-51316471	0	-	51190997	51219937	789624	4	81,211,204,93,	0,2381,28743,125381,
#Deleted in new
chr7	51259428	51260167	chr7:51259428-51260167	7	-	51259428	51259428	16724991	1	739,	0,
#Deleted in new
chr7	51382283	51384660	chr7:51382283-51384660	7	+	51382283	51382283	16724991	1	2377,	0,
#Deleted in new
chr7	51386362	51387101	chr7:51386362-51387101	7	-	51386362	51386362	16724991	1	739,	0,
#Deleted in new
chr7	51388429	51389114	chr7:51388429-51389114	7	-	51388429	51388429	16724991	1	685,	0,
#Partially deleted in new
chr7	51471716	51729716	chr7:51471716-51729716	3	+	51471716	51471716	8553170	7	193,159,111,106,58,89,848,	0,98624,192991,237579,238636,239255,257152,
#Deleted in new
chr7	51600285	51600573	chr7:51600285-51600573	7	-	51600285	51600285	16724991	1	288,	0,
#Partially deleted in new
chr7	51614250	51630870	chr7:51614250-51630870	3	+	51614250	51614250	8553170	2	396,192,	0,16428,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	51716656	51716922	chr7:51716656-51716922	3	+	51716656	51716656	8553170	1	266,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	52165234	52192913	chr7:52165234-52192913	3	-	52165234	52165234	8553170	4	175,162,96,305,	0,11423,13291,27374,
#Deleted in new
chr7	52269436	52269569	chr7:52269436-52269569	3	-	52269436	52269436	8553170	1	133,	0,
#Partially deleted in new
chr7	52891836	52897807	chr7:52891836-52897807	7	-	52891836	52891836	16724991	2	475,1114,	0,4857,
#Deleted in new
chr7	53002419	53003429	chr7:53002419-53003429	7	+	53002419	53002419	16724991	1	1010,	0,
#Deleted in new
chr7	53035641	53036924	chr7:53035641-53036924	3	+	53035671	53036562	789624	1	1283,	0,
#Deleted in new
chr7	53187387	53188938	chr7:53187387-53188938	7	+	53187387	53187387	16724991	1	1551,	0,
#Deleted in new
chr7	53316148	53316740	chr7:53316148-53316740	7	+	53316148	53316148	16724991	1	592,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	53366057	53366209	chr7:53366057-53366209	3	+	53366057	53366057	8553170	1	152,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	53490147	53490439	chr7:53490147-53490439	3	-	53490147	53490147	8553170	1	292,	0,
#Deleted in new
chr7	53514991	53517116	chr7:53514991-53517116	3	-	53514991	53514991	8553170	2	285,81,	0,2044,
#Partially deleted in new
chr7	53559213	53568249	chr7:53559213-53568249	3	-	53559213	53559213	8553170	3	205,134,98,	0,5322,8938,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	53655508	53811931	chr7:53655508-53811931	3	-	53655508	53655508	789624	6	1940,163,119,745,93,424,	0,36418,109618,109974,124437,155999,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	53776135	53776324	chr7:53776135-53776324	3	+	53776135	53776135	8553170	1	189,	0,
#Deleted in new
chr7	53779782	53780263	chr7:53779782-53780263	7	+	53779782	53779782	16724991	2	142,250,	0,231,
#Deleted in new
chr7	53787166	53787298	chr7:53787166-53787298	7	+	53787166	53787166	16724991	1	132,	0,
#Partially deleted in new
chr7	53862232	53863339	chr7:53862232-53863339	7	+	53862232	53862232	16724991	1	1107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	53926675	53947744	chr7:53926675-53947744	3	-	53926675	53926675	8553170	3	310,221,94,	0,3352,20975,
#Deleted in new
chr7	54201223	54202421	chr7:54201223-54202421	3	+	54201223	54201223	8553170	1	1198,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	54330696	54349849	chr7:54330696-54349849	3	+	54330696	54330696	789624	3	122,72,485,	0,16597,18668,
#Partially deleted in new
chr7	54330778	54349597	chr7:54330778-54349597	1	+	54330778	54330778	8553170	3	40,72,700,	0,16515,18119,
#Deleted in new
chr7	54419443	54420328	chr7:54419443-54420328	7	+	54419443	54419443	16724991	1	885,	0,
#Partially deleted in new
chr7	54542324	54552531	chr7:54542324-54552531	1	+	54542730	54550271	789624	4	485,167,51,2698,	0,2297,4622,7509,
#Partially deleted in new
chr7	54542324	54571080	chr7:54542324-54571080	3	+	54542730	54569085	789624	5	485,167,51,337,2072,	0,2297,4622,7509,26684,
#Deleted in new
chr7	54542325	54547160	chr7:54542325-54547160	0	+	54542325	54542325	8553170	3	484,167,214,	0,2296,4621,
#Partially deleted in new
chr7	54542415	54570495	chr7:54542415-54570495	1	+	54542730	54569219	789624	6	394,167,51,337,207,1365,	0,2206,4531,7418,11451,26715,
#Partially deleted in new
chr7	54542604	54569446	chr7:54542604-54569446	1	+	54542730	54569219	789624	5	205,167,51,337,316,	0,2017,4342,7229,26526,
#Partially deleted in new
chr7	54546160	54569489	chr7:54546160-54569489	0	+	54546160	54546160	789624	4	56,51,337,359,	0,786,3673,22970,
#Partially deleted in new
chr7	54546671	54569287	chr7:54546671-54569287	0	+	54546671	54546671	8553170	4	68,51,337,279,	0,275,3162,22337,
#Partially deleted in new
chr7	54546992	54550919	chr7:54546992-54550919	0	+	54546992	54546992	8553170	3	5,337,167,	0,2841,3760,
#Partially deleted in new
chr7	54556969	54571726	chr7:54556969-54571726	3	+	54556969	54556969	789624	4	326,2122,122,461,	0,880,13800,14296,
#Partially deleted in new
chr7	54576051	54578794	chr7:54576051-54578794	3	-	54576051	54576051	8553170	2	242,515,	0,2228,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	54621024	54621131	chr7:54621024-54621131	3	+	54621024	54621024	8553170	1	107,	0,
#Deleted in new
chr7	54656357	54656734	chr7:54656357-54656734	7	+	54656357	54656357	16724991	1	377,	0,
#Partially deleted in new
chr7	54752249	54759246	chr7:54752249-54759246	1	-	54752410	54757588	789624	4	171,103,100,85,	0,3529,5245,6912,
#Partially deleted in new
chr7	54752250	54759246	chr7:54752250-54759246	1	-	54752410	54757588	789624	4	170,103,100,89,	0,3528,5244,6907,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	54752252	54759974	chr7:54752252-54759974	3	-	54752410	54757588	789624	5	168,103,100,177,184,	0,3526,5242,6905,7538,
#Partially deleted in new
chr7	54752256	54759182	chr7:54752256-54759182	1	-	54752410	54757588	789624	4	164,103,100,145,	0,3522,5238,6781,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	54754791	54759198	chr7:54754791-54759198	0	-	54754791	54754791	8553170	3	1090,100,37,	0,2703,4370,
#Partially deleted in new
chr7	54755404	54759241	chr7:54755404-54759241	0	-	54755404	54755404	8553170	3	477,100,84,	0,2090,3753,
#Partially deleted in new
chr7	54755502	54759215	chr7:54755502-54759215	0	-	54755502	54755502	8553170	2	379,58,	0,3655,
#Partially deleted in new
chr7	54759424	54804928	chr7:54759424-54804928	3	+	54759424	54759424	789624	3	100,118,263,	0,23683,45241,
#Deleted in new
chr7	54933698	54938184	chr7:54933698-54938184	7	+	54933698	54933698	16724991	1	4486,	0,
#Partially deleted in new
chr7	55019020	55203076	chr7:55019020-55203076	1	+	55019277	55202765	789624	26	345,152,184,69,119,142,117,127,74,91,200,133,91,158,39,142,123,99,186,156,76,147,98,168,48,560,	0,123265,124284,132273,133525,134990,136809,137512,137738,138642,141118,142478,144712,146259,152154,153962,154900,155701,162272,172698,173745,179696,181295,182167,182714,183496,
#Partially deleted in new
chr7	55019031	55168635	chr7:55019031-55168635	1	+	55019277	55168529	0	16	334,152,184,135,69,119,142,117,127,74,91,200,133,91,158,113,	0,123254,124273,127574,132262,133514,134979,136798,137501,137727,138631,141107,142467,144701,146248,149491,
#Partially deleted in new
chr7	55019031	55207337	chr7:55019031-55207337	1	+	55019277	55205617	789624	27	334,152,184,69,119,142,117,127,74,91,200,133,91,158,39,142,123,99,186,156,76,147,98,168,48,109,2082,	0,123254,124273,132262,133514,134979,136798,137501,137727,138631,141107,142467,144701,146248,152143,153951,154889,155690,162261,172687,173734,179685,181284,182156,182703,183485,186224,
#Partially deleted in new
chr7	55019032	55171045	chr7:55019032-55171045	1	+	55019277	55170544	0	16	333,152,184,135,69,119,142,117,127,74,91,200,133,91,158,739,	0,123253,124272,127573,132261,133513,134978,136797,137500,137726,138630,141106,142466,144700,146247,151274,
#Partially deleted in new
chr7	55019033	55156951	chr7:55019033-55156951	1	+	55019277	55156843	0	10	332,152,184,135,69,119,142,117,127,193,	0,123252,124271,127572,132260,133512,134977,136796,137499,137725,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr7	55019100	55211628	chr7:55019100-55211628	3	+	55019277	55205617	0	28	265,152,184,135,69,119,142,117,127,74,91,200,133,91,158,39,142,123,99,186,156,76,147,98,168,48,109,6373,	0,123185,124204,127505,132193,133445,134910,136729,137432,137658,138562,141038,142398,144632,146179,152074,153882,154820,155621,162192,172618,173665,179616,181215,182087,182634,183416,186155,
#Partially deleted in new
chr7	55019130	55044049	chr7:55019130-55044049	0	+	55019130	55019130	8553170	2	235,217,	0,24702,
#Partially deleted in new
chr7	55019150	55119401	chr7:55019150-55119401	0	+	55019150	55019150	8553170	2	215,346,	0,99905,
#Partially deleted in new
chr7	55109722	55146724	chr7:55109722-55146724	0	+	55142356	55146724	789624	4	236,152,184,119,	0,32563,33582,36883,
#Partially deleted in new
chr7	55152336	55207337	chr7:55152336-55207337	1	+	55152336	55173073	789624	24	10,119,142,117,127,74,91,200,133,91,158,39,142,123,99,186,156,76,147,98,168,48,109,2082,	0,209,1674,3493,4196,4422,5326,7802,9162,11396,12943,18838,20646,21584,22385,28956,39382,40429,46380,47979,48851,49398,50180,52919,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	55179749	55188934	chr7:55179749-55188934	3	-	55179749	55179749	789624	2	2728,78,	0,9107,
#Partially deleted in new
chr7	55192810	55200802	chr7:55192810-55200802	0	+	55192810	55192810	8553170	3	31,147,487,	0,5906,7505,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	55235964	55255635	chr7:55235964-55255635	3	-	55235964	55235964	789624	4	2499,105,232,105,	0,2597,19222,19566,
#Deleted in new
chr7	55244246	55245681	chr7:55244246-55245681	7	+	55244246	55244246	16724991	1	1435,	0,
#Deleted in new
chr7	55259808	55260256	chr7:55259808-55260256	7	-	55259808	55259808	16724991	1	448,	0,
#Deleted in new
chr7	55342315	55344958	chr7:55342315-55344958	7	+	55342315	55342315	16724991	1	2643,	0,
#Partially deleted in new
chr7	55365447	55433742	chr7:55365447-55433742	3	+	55366025	55431320	789624	9	782,118,208,148,147,183,177,73,2517,	0,26345,32975,34509,35726,46459,59806,62927,65778,
#Partially deleted in new
chr7	55366110	55431528	chr7:55366110-55431528	0	+	55366110	55379649	789624	10	119,187,118,208,148,147,183,177,73,303,	0,13536,25682,32312,33846,35063,45796,59143,62264,65115,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	55394068	55400107	chr7:55394068-55400107	0	+	55394068	55394068	8553170	4	44,286,208,151,	0,2877,4354,5888,
#Partially deleted in new
chr7	55411359	55431322	chr7:55411359-55431322	0	+	55411359	55411359	8553170	5	43,183,177,73,97,	0,547,13894,17015,19866,
#Partially deleted in new
chr7	55428055	55431406	chr7:55428055-55431406	0	+	55428055	55428055	8553170	2	392,181,	0,3170,
#Partially deleted in new
chr7	55436055	55572413	chr7:55436055-55572413	0	-	55436055	55436055	8553170	5	119,137,78,59,143,	0,56226,61557,85016,136215,
#Partially deleted in new
chr7	55470612	55572525	chr7:55470612-55572525	3	-	55472854	55572324	789624	5	2433,137,78,59,255,	0,21669,27000,50459,101658,
#Partially deleted in new
chr7	55470613	55571868	chr7:55470613-55571868	1	-	55472854	55492408	789624	5	2432,137,78,59,160,	0,21668,26999,50458,101095,
#Partially deleted in new
chr7	55470613	55537694	chr7:55470613-55537694	1	-	55472854	55537527	789624	5	2432,137,78,59,194,	0,21668,26999,50458,66887,
#Partially deleted in new
chr7	55471936	55527022	chr7:55471936-55527022	1	-	55472854	55492408	789624	5	1109,137,78,59,288,	0,20345,25676,49135,54798,
#Partially deleted in new
chr7	55471967	55538660	chr7:55471967-55538660	1	-	55472854	55538657	789624	5	1078,137,78,59,48,	0,20314,25645,49104,66645,
#Partially deleted in new
chr7	55472202	55552852	chr7:55472202-55552852	1	-	55472854	55552655	789624	5	843,137,78,59,200,	0,20079,25410,48869,80450,
#Partially deleted in new
chr7	55472708	55553887	chr7:55472708-55553887	1	-	55472854	55521073	789624	4	337,137,59,77,	0,19573,48363,81102,
#Partially deleted in new
chr7	55472753	55516077	chr7:55472753-55516077	1	-	55472854	55492408	789624	4	292,137,78,142,	0,19528,24859,43182,
#Partially deleted in new
chr7	55472776	55572287	chr7:55472776-55572287	1	-	55472854	55562027	789624	6	269,137,78,59,72,17,	0,19505,24836,48295,89203,99494,
#Partially deleted in new
chr7	55472884	55539627	chr7:55472884-55539627	0	-	55472884	55492408	789624	5	161,137,78,59,139,	0,19397,24728,48187,66604,
#Partially deleted in new
chr7	55472916	55537694	chr7:55472916-55537694	0	-	55472916	55492408	789624	5	129,137,78,59,136,	0,19365,24696,48155,64642,
#Partially deleted in new
chr7	55473014	55521866	chr7:55473014-55521866	0	-	55473014	55492408	789624	5	31,137,78,59,286,	0,19267,24598,48057,48566,
#Partially deleted in new
chr7	55492262	55521870	chr7:55492262-55521870	0	-	55492262	55492262	8553170	4	156,78,59,290,	0,5350,28809,29318,
#Partially deleted in new
chr7	55492343	55572460	chr7:55492343-55572460	0	-	55492343	55492408	789624	5	75,78,59,83,190,	0,5269,28728,38485,79927,
#Partially deleted in new
chr7	55492385	55572454	chr7:55492385-55572454	0	-	55492385	55492385	8553170	5	33,78,59,198,184,	0,5227,28686,69468,79885,
#Partially deleted in new
chr7	55492839	55572988	chr7:55492839-55572988	0	-	55492839	55492839	8553170	5	134,122,78,59,189,	0,248,4773,28232,79960,
#Partially deleted in new
chr7	55573170	55588336	chr7:55573170-55588336	3	+	55573170	55573170	8553170	3	147,164,241,	0,14600,14925,
#Deleted in new
chr7	55592073	55593193	chr7:55592073-55593193	3	+	55592073	55592073	8553170	2	626,313,	0,807,
#Deleted in new
chr7	55593776	55595006	chr7:55593776-55595006	3	+	55593776	55593776	8553170	2	120,423,	0,807,
#Partially deleted in new
chr7	55638273	55638842	chr7:55638273-55638842	7	-	55638273	55638273	16724991	1	569,	0,
#Deleted in new
chr7	55645619	55646951	chr7:55645619-55646951	7	+	55645619	55645619	16724991	1	1332,	0,
#Partially deleted in new
chr7	55656767	55678490	chr7:55656767-55678490	7	-	55656767	55656767	16724991	6	171,192,324,955,132,174,	0,2222,3022,18396,20844,21549,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	55681073	55689301	chr7:55681073-55689301	5	-	55681073	55681073	16724991	4	1752,164,146,389,	0,4098,6705,7839,
#Partially deleted in new
chr7	55682651	55713252	chr7:55682651-55713252	7	-	55682651	55682651	16724991	9	174,164,146,187,146,190,146,190,148,	0,2520,5127,8662,16351,24514,28711,29844,30453,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	55685976	55686081	chr7:55685976-55686081	3	+	55685976	55685976	8553170	1	105,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	55731099	55731403	chr7:55731099-55731403	3	+	55731099	55731099	8553170	1	304,	0,
#Deleted in new
chr7	55732143	55732431	chr7:55732143-55732431	7	+	55732143	55732143	16724991	1	288,	0,
#Deleted in new
chr7	55736778	55739605	chr7:55736778-55739605	7	+	55736778	55736778	16724991	1	2827,	0,
#Deleted in new
chr7	55741524	55741869	chr7:55741524-55741869	7	+	55741524	55741524	16724991	1	345,	0,
#Deleted in new
chr7	55743072	55743457	chr7:55743072-55743457	7	+	55743072	55743072	16724991	1	385,	0,
#Partially deleted in new
chr7	55764796	55773288	chr7:55764796-55773288	7	+	55764796	55764796	16724991	2	153,108,	0,8384,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	55789367	55789474	chr7:55789367-55789474	3	+	55789367	55789367	8553170	1	107,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	55793543	55862789	chr7:55793543-55862789	3	-	55795912	55861996	789624	10	2549,133,169,97,162,187,196,121,69,102,	0,11714,13546,25583,40881,49398,50979,52973,68399,69144,
#Deleted in new
chr7	55797945	55798480	chr7:55797945-55798480	7	-	55797945	55797945	16724991	1	535,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	55798033	55798876	chr7:55798033-55798876	7	+	55798033	55798033	16724991	1	843,	0,
#Partially deleted in new
chr7	55810778	55811411	chr7:55810778-55811411	7	-	55810778	55810778	16724991	1	633,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	55844536	55862755	chr7:55844536-55862755	0	-	55844536	55844536	8553170	5	182,121,120,69,68,	0,1980,6250,17406,18151,
#Deleted in new
chr7	55876737	55877024	chr7:55876737-55877024	7	-	55876737	55876737	16724991	1	287,	0,
#Deleted in new
chr7	55877911	55878164	chr7:55877911-55878164	7	+	55877911	55877911	16724991	1	253,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	55887276	55955239	chr7:55887276-55955239	3	+	55912675	55955178	789624	8	404,127,453,57,127,93,140,331,	0,18976,24339,25390,35885,36330,65902,67632,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	55887474	55942225	chr7:55887474-55942225	3	+	55912636	55940006	789624	7	206,127,453,89,127,93,3244,	0,18778,24141,25160,35687,36132,51507,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	55887475	55924878	chr7:55887475-55924878	0	+	55887475	55887475	8553170	5	205,127,453,89,1717,	0,18777,24140,25159,35686,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	55887536	55942530	chr7:55887536-55942530	0	+	55912636	55918110	789624	9	144,127,453,89,256,127,93,1192,1139,	0,18716,24079,25098,30505,35625,36070,51445,53855,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	55906188	55911913	chr7:55906188-55911913	0	+	55906188	55906188	8553170	2	191,298,	0,5427,
#Partially deleted in new
chr7	55911991	55924342	chr7:55911991-55924342	0	+	55911991	55911991	8553170	5	77,89,127,93,151,	0,643,11170,11615,12200,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	55912637	55940740	chr7:55912637-55940740	1	+	55912675	55940006	789624	4	86,127,93,1759,	0,10524,10969,26344,
#Partially deleted in new
chr7	55951792	55984877	chr7:55951792-55984877	0	+	55982256	55984877	789624	7	138,140,46,95,71,141,31,	0,26333,26557,29680,30417,31935,33054,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	55951818	55956501	chr7:55951818-55956501	3	+	55953195	55955178	0	3	112,140,1593,	0,1360,3090,
#Partially deleted in new
chr7	55951962	55955172	chr7:55951962-55955172	0	+	55953195	55955172	789624	3	314,140,264,	0,1216,2946,
#Partially deleted in new
chr7	55964580	56000181	chr7:55964580-56000181	3	+	55964609	55999072	789624	10	121,140,46,95,71,141,32,95,84,1174,	0,13545,13769,16892,17629,19147,20266,30313,32785,34427,
#Partially deleted in new
chr7	55964580	56000181	chr7:55964580-56000181	1	+	55964609	55999072	789624	8	121,140,95,141,32,95,84,1174,	0,13545,16892,19147,20266,30313,32785,34427,
#Partially deleted in new
chr7	55964594	55978599	chr7:55964594-55978599	0	+	55964594	55964594	8553170	3	107,140,250,	0,13531,13755,
#Partially deleted in new
chr7	55964605	55983812	chr7:55964605-55983812	0	+	55964609	55981505	789624	7	96,140,46,127,95,71,85,	0,13520,13744,15154,16867,17604,19122,
#Partially deleted in new
chr7	55964961	55994938	chr7:55964961-55994938	0	+	55982256	55994938	789624	8	248,140,46,95,71,141,32,45,	0,13164,13388,16511,17248,18766,19885,29932,
#Partially deleted in new
chr7	55964997	55981503	chr7:55964997-55981503	0	+	55964997	55964997	8553170	5	153,140,46,124,31,	0,13128,13352,14765,16475,
#Partially deleted in new
chr7	55965112	55981498	chr7:55965112-55981498	0	+	55965112	55965112	8553170	4	38,140,46,26,	0,13013,13237,16360,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	55978906	56000178	chr7:55978906-56000178	0	+	55978906	55978906	8553170	7	2661,71,141,32,95,84,1171,	0,3303,4821,5940,15987,18459,20101,
#Partially deleted in new
chr7	55981472	55999304	chr7:55981472-55999304	0	+	55981472	55991831	789624	8	95,71,141,32,57,95,84,297,	0,737,2255,3374,10355,13421,15893,17535,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	55981770	55983790	chr7:55981770-55983790	0	+	55981770	55981770	8553170	2	510,63,	0,1957,
#Partially deleted in new
chr7	56011050	56051448	chr7:56011050-56051448	0	-	56011761	56021212	0	7	183,326,149,146,135,159,311,	0,493,3972,6183,8549,10022,40087,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	56011066	56051604	chr7:56011066-56051604	3	-	56011761	56021212	0	8	803,149,146,135,159,126,146,467,	0,3956,6167,8533,10006,20862,22894,40071,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	56011067	56051604	chr7:56011067-56051604	1	-	56011761	56021212	0	8	802,149,146,135,159,126,194,467,	0,3955,6166,8532,10005,20861,22893,40070,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	56011537	56034171	chr7:56011537-56034171	0	-	56011537	56011537	8553170	3	332,149,211,	0,3485,22423,
#Partially deleted in new
chr7	56015030	56034156	chr7:56015030-56034156	0	-	56015030	56021212	789624	6	141,146,135,159,49,196,	0,2203,4569,6042,16898,18930,
#Partially deleted in new
chr7	56017276	56034172	chr7:56017276-56034172	0	-	56019675	56021212	789624	5	103,209,159,126,212,	0,2323,3796,14652,16684,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	56021072	56051288	chr7:56021072-56051288	0	-	56021072	56021212	789624	5	159,126,114,194,151,	0,10856,12308,12888,30065,
#Partially deleted in new
chr7	56021072	56051467	chr7:56021072-56051467	0	-	56021072	56021212	789624	4	159,126,194,154,	0,10856,12888,30241,
#Partially deleted in new
chr7	56021180	56051446	chr7:56021180-56051446	0	-	56021180	56021212	789624	4	51,49,146,309,	0,10748,12780,29957,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	56021205	56051392	chr7:56021205-56051392	0	-	56021205	56021212	8553170	5	26,126,194,114,79,	0,10723,12755,21942,30108,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	56021205	56051467	chr7:56021205-56051467	0	-	56021205	56021212	8553170	5	26,126,114,143,330,	0,10723,12175,12755,29932,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	56033133	56034171	chr7:56033133-56034171	0	-	56033133	56033133	8553170	2	361,211,	0,827,
#Partially deleted in new
chr7	56051629	56063989	chr7:56051629-56063989	3	+	56051848	56063085	789624	14	356,64,135,174,104,111,160,83,97,148,134,103,73,977,	0,792,2739,3994,4681,6363,6732,6990,7914,8639,9177,10117,11053,11383,
#Partially deleted in new
chr7	56051684	56063989	chr7:56051684-56063989	1	+	56051848	56063085	789624	13	301,64,174,104,111,160,83,97,148,134,103,73,977,	0,737,3939,4626,6308,6677,6935,7859,8584,9122,10062,10998,11328,
#Partially deleted in new
chr7	56054475	56055856	chr7:56054475-56055856	0	+	56054475	56054475	8553170	2	28,233,	0,1148,
#Partially deleted in new
chr7	56055364	56055502	chr7:56055364-56055502	3	+	56055364	56055364	5263520	1	138,	0,
#Partially deleted in new
chr7	56056311	56059010	chr7:56056311-56059010	0	+	56056311	56056311	8553170	4	103,111,160,391,	0,1681,2050,2308,
#Partially deleted in new
chr7	56059543	56062059	chr7:56059543-56062059	0	+	56059543	56059543	8553170	4	97,148,134,313,	0,725,1263,2203,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	56059864	56060940	chr7:56059864-56060940	0	+	56059864	56059864	8553170	2	552,134,	0,942,
#Deleted in new
chr7	56060469	56060602	chr7:56060469-56060602	3	+	56060469	56060469	789624	1	133,	0,
#Partially deleted in new
chr7	56060610	56063299	chr7:56060610-56063299	0	+	56060610	56060610	8553170	5	68,134,103,73,287,	0,196,1136,2072,2402,
#Deleted in new
chr7	56061677	56063178	chr7:56061677-56063178	0	+	56061677	56061677	8553170	3	172,73,166,	0,1005,1335,
#Deleted in new
chr7	56062618	56063620	chr7:56062618-56063620	0	+	56062618	56062618	8553170	2	137,608,	0,394,
#Partially deleted in new
chr7	56064001	56080124	chr7:56064001-56080124	1	+	56064254	56079612	789624	8	377,157,115,151,56,85,145,597,	0,4480,8995,10584,12832,14100,14362,15526,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	56064223	56080669	chr7:56064223-56080669	1	+	56073036	56079612	789624	8	155,115,45,151,56,85,145,1142,	0,8773,9950,10362,12610,13878,14140,15304,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	56064223	56080670	chr7:56064223-56080670	3	+	56064254	56079612	789624	9	155,157,115,45,151,56,85,145,1143,	0,4258,8773,9950,10362,12610,13878,14140,15304,
#Partially deleted in new
chr7	56064253	56080187	chr7:56064253-56080187	1	+	56064254	56079612	789624	6	125,157,115,85,145,660,	0,4228,8743,13848,14110,15274,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	56064254	56080670	chr7:56064254-56080670	1	+	56064254	56079871	789624	8	124,157,115,45,151,56,85,1143,	0,4227,8742,9919,10331,12579,13847,15273,
#Partially deleted in new
chr7	56064254	56078502	chr7:56064254-56078502	0	+	56064254	56078502	789624	8	124,166,115,45,151,56,85,139,	0,4227,8742,9919,10331,12579,13847,14109,
#Partially deleted in new
chr7	56064264	56079729	chr7:56064264-56079729	0	+	56064311	56073085	789624	8	114,115,45,151,56,85,145,202,	0,8732,9909,10321,12569,13837,14099,15263,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	56064276	56080665	chr7:56064276-56080665	0	+	56064311	56078130	789624	6	102,157,56,85,145,1138,	0,4205,12557,13825,14087,15251,
#Partially deleted in new
chr7	56064283	56079832	chr7:56064283-56079832	1	+	56064311	56079612	789624	7	95,157,115,45,85,145,305,	0,4198,8713,9890,13818,14080,15244,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	56064300	56080638	chr7:56064300-56080638	0	+	56064311	56078159	789624	8	78,157,115,45,56,85,145,1111,	0,4181,8696,9873,12533,13801,14063,15227,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	56064300	56073956	chr7:56064300-56073956	0	+	56064300	56064300	8553170	3	78,157,960,	0,4181,8696,
#Partially deleted in new
chr7	56064304	56074397	chr7:56064304-56074397	0	+	56064304	56064304	8553170	4	74,157,115,224,	0,4177,8692,9869,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	56064307	56080669	chr7:56064307-56080669	0	+	56064311	56078159	789624	7	71,157,115,56,85,145,1142,	0,4174,8689,12526,13794,14056,15220,
#Partially deleted in new
chr7	56064309	56079875	chr7:56064309-56079875	0	+	56064311	56078159	789624	9	69,157,115,45,54,56,85,145,523,	0,4172,8687,9864,10276,12524,13792,14054,15043,
#Partially deleted in new
chr7	56064320	56079567	chr7:56064320-56079567	0	+	56064320	56079567	789624	9	58,157,115,105,151,56,85,145,40,	0,4161,8676,9793,10265,12513,13781,14043,15207,
#Partially deleted in new
chr7	56064331	56074789	chr7:56064331-56074789	0	+	56064331	56064331	8553170	5	47,157,115,45,204,	0,4150,8665,9842,10254,
#Partially deleted in new
chr7	56076527	56078268	chr7:56076527-56078268	0	+	56076527	56076527	8553170	2	362,167,	0,1574,
#Partially deleted in new
chr7	56076602	56079747	chr7:56076602-56079747	0	+	56076602	56076602	8553170	4	287,85,145,220,	0,1499,1761,2925,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	56080282	56092996	chr7:56080282-56092996	1	-	56081053	56088941	789624	11	1017,126,154,91,164,66,96,55,179,117,161,	0,1347,1610,1880,2995,3367,3866,6687,7315,8576,12553,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	56080282	56092996	chr7:56080282-56092996	1	-	56081053	56088941	789624	10	1017,126,154,91,164,75,55,179,117,161,	0,1347,1610,1880,2995,3367,6687,7315,8576,12553,
#Partially deleted in new
chr7	56080981	56092996	chr7:56080981-56092996	3	-	56081053	56088941	789624	10	318,126,154,91,164,66,55,179,117,161,	0,648,911,1181,2296,2668,5988,6616,7877,11854,
#Partially deleted in new
chr7	56081716	56092932	chr7:56081716-56092932	0	-	56081716	56088941	789624	5	39,164,66,117,97,	0,1561,1933,7142,11119,
#Partially deleted in new
chr7	56082013	56092946	chr7:56082013-56092946	0	-	56082013	56088941	789624	6	33,91,164,66,117,111,	0,149,1264,1636,6845,10822,
#Partially deleted in new
chr7	56083150	56087693	chr7:56083150-56087693	0	-	56083150	56083150	8553170	3	291,66,96,	0,499,4447,
#Partially deleted in new
chr7	56083340	56092952	chr7:56083340-56092952	0	-	56083710	56088941	789624	5	101,66,179,117,117,	0,309,4257,5518,9495,
#Partially deleted in new
chr7	56084160	56092951	chr7:56084160-56092951	0	-	56084160	56084160	8553170	5	84,55,179,117,116,	0,2809,3437,4698,8675,
#Partially deleted in new
chr7	56086874	56092977	chr7:56086874-56092977	0	-	56086874	56086874	8553170	4	150,179,117,142,	0,723,1984,5961,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	56088553	56092996	chr7:56088553-56092996	0	-	56088553	56088553	8553170	2	422,161,	0,4282,
#Partially deleted in new
chr7	56101568	56106576	chr7:56101568-56106576	3	-	56101850	56106413	789624	4	293,145,250,213,	0,1298,2657,4795,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	56102635	56106431	chr7:56102635-56106431	0	-	56102635	56102635	8553170	3	376,250,68,	0,1590,3728,
#Partially deleted in new
chr7	56114680	56116400	chr7:56114680-56116400	3	-	56116020	56116314	789624	2	217,386,	0,1334,
#Deleted in new
chr7	56163144	56163533	chr7:56163144-56163533	7	+	56163144	56163144	16724991	1	389,	0,
#Deleted in new
chr7	56175633	56176412	chr7:56175633-56176412	7	+	56175633	56175633	16724991	1	779,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	56214978	56220747	chr7:56214978-56220747	3	+	56214978	56214978	8553170	3	160,197,402,	0,3995,5367,
#Partially deleted in new
chr7	56228633	56229782	chr7:56228633-56229782	7	-	56228633	56228633	16724991	1	1149,	0,
#Partially deleted in new
chr7	56288229	56291425	chr7:56288229-56291425	7	+	56288229	56288229	16724991	2	1354,1530,	0,1666,
#Deleted in new
chr7	56304677	56305526	chr7:56304677-56305526	7	-	56304677	56304677	16724991	1	849,	0,
#Deleted in new
chr7	56322803	56323601	chr7:56322803-56323601	7	+	56322803	56322803	16724991	2	53,287,	0,511,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	56340230	56340337	chr7:56340230-56340337	3	-	56340230	56340230	8553170	1	107,	0,
#Deleted in new
chr7	56360361	56360541	chr7:56360361-56360541	7	-	56360361	56360361	16724991	1	180,	0,
#Deleted in new
chr7	56362457	56365270	chr7:56362457-56365270	7	+	56362457	56362457	16724991	1	2813,	0,
#Partially deleted in new
chr7	56380975	56381312	chr7:56380975-56381312	7	+	56380975	56380975	16724991	1	337,	0,
#Deleted in new
chr7	56402069	56402173	chr7:56402069-56402173	3	-	56402069	56402069	8553170	1	104,	0,
#Partially deleted in new
chr7	56408698	56409210	chr7:56408698-56409210	7	-	56408698	56408698	16724991	2	89,97,	0,415,
#Partially deleted in new
chr7	56421856	56432702	chr7:56421856-56432702	5	-	56421856	56421856	16724991	5	153,948,129,176,215,	0,1833,4278,4978,10631,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	56462535	56467771	chr7:56462535-56467771	7	+	56462535	56462535	16724991	2	125,1527,	0,3709,
#Partially deleted in new
chr7	56482104	56483295	chr7:56482104-56483295	3	-	56482104	56482104	789624	2	352,321,	0,870,
#Deleted in new
chr7	56490681	56491635	chr7:56490681-56491635	7	+	56490681	56490681	16724991	1	954,	0,
#Deleted in new
chr7	56493123	56497285	chr7:56493123-56497285	3	+	56493123	56493123	8553170	1	4162,	0,
#Deleted in new
chr7	56502283	56503044	chr7:56502283-56503044	7	-	56502283	56502283	16724991	1	761,	0,
#Deleted in new
chr7	56525427	56526113	chr7:56525427-56526113	7	-	56525427	56525427	16724991	1	686,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	56534229	56538130	chr7:56534229-56538130	3	-	56534229	56534229	789624	2	2659,82,	0,3819,
#Deleted in new
chr7	56559220	56559958	chr7:56559220-56559958	7	+	56559220	56559220	16724991	1	738,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	56567905	56568858	chr7:56567905-56568858	7	-	56567905	56567905	16724991	2	195,474,	0,479,
#Partially deleted in new
chr7	56577847	56578866	chr7:56577847-56578866	7	+	56577847	56577847	16724991	2	120,90,	0,929,
#Deleted in new
chr7	56597378	56598342	chr7:56597378-56598342	7	+	56597378	56597378	16724991	1	964,	0,
#Deleted in new
chr7	56603409	56603553	chr7:56603409-56603553	7	+	56603409	56603409	16724991	1	144,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	56631738	56632727	chr7:56631738-56632727	7	-	56631738	56631738	16724991	2	397,297,	0,692,
#Partially deleted in new
chr7	56638942	56650696	chr7:56638942-56650696	7	-	56638942	56638942	16724991	3	1370,96,125,	0,11036,11629,
#Partially deleted in new
chr7	56685035	56687366	chr7:56685035-56687366	7	-	56685035	56685035	16724991	3	575,286,209,	0,955,2122,
#Partially deleted in new
chr7	56736395	56736590	chr7:56736395-56736590	7	-	56736395	56736395	16724991	1	195,	0,
#Deleted in new
chr7	56805335	56808148	chr7:56805335-56808148	7	+	56805335	56805335	16724991	1	2813,	0,
#Deleted in new
chr7	56811798	56812446	chr7:56811798-56812446	0	-	56811798	56811798	8553170	1	648,	0,
#Deleted in new
chr7	56813489	56815978	chr7:56813489-56815978	0	-	56813489	56813489	8553170	3	139,122,387,	0,1977,2102,
#Deleted in new
chr7	56817021	56817864	chr7:56817021-56817864	0	-	56817021	56817021	8553170	3	139,122,387,	0,331,456,
#Deleted in new
chr7	56818907	56819702	chr7:56818907-56819702	0	-	56818907	56818907	8553170	3	139,122,387,	0,283,408,
#Deleted in new
chr7	56820745	56821684	chr7:56820745-56821684	0	-	56820745	56820745	8553170	3	139,122,387,	0,427,552,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	56876499	56877552	chr7:56876499-56877552	5	-	56876499	56876499	16724991	2	44,181,	0,872,
#Partially deleted in new
chr7	56940340	56944353	chr7:56940340-56944353	7	-	56940340	56940340	16724991	4	129,114,132,169,	0,582,955,3844,
#Deleted in new
chr7	56955784	56955864	chr7:56955784-56955864	3	-	56955784	56955784	5263520	1	80,	0,
#Partially deleted in new
chr7	56991887	57009149	chr7:56991887-57009149	7	+	56991887	56991887	16724991	11	153,142,118,76,109,117,165,1295,237,75,204,	0,893,4066,4692,4874,9215,10139,11409,15915,16349,17058,
#Partially deleted in new
chr7	57014284	57020273	chr7:57014284-57020273	7	-	57014284	57014284	16724991	5	140,241,188,139,263,	0,2265,3494,3804,5726,
#Deleted in new
chr7	57060589	57061301	chr7:57060589-57061301	7	-	57060589	57060589	16724991	2	244,126,	0,586,
#Partially deleted in new
chr7	57067949	57074664	chr7:57067949-57074664	7	-	57067949	57067949	16724991	2	126,107,	0,6608,
#Partially deleted in new
chr7	57119613	57139864	chr7:57119613-57139864	3	-	57119839	57132324	789624	5	1539,96,127,53,257,	0,6404,6978,12672,19994,
#Partially deleted in new
chr7	57119620	57132341	chr7:57119620-57132341	1	-	57119839	57132324	789624	4	1532,96,127,56,	0,6397,6971,12665,
#Partially deleted in new
chr7	57119839	57132324	chr7:57119839-57132324	1	-	57119839	57132324	789624	6	460,83,434,96,127,39,	0,544,879,6178,6752,12446,
#Partially deleted in new
chr7	57147985	57150347	chr7:57147985-57150347	7	-	57147985	57147985	16724991	3	324,1520,136,	0,647,2226,
#Partially deleted in new
chr7	57163167	57166024	chr7:57163167-57166024	7	-	57163167	57163167	16724991	3	295,661,1171,	0,753,1686,
#Partially deleted in new
chr7	57167038	57167245	chr7:57167038-57167245	7	+	57167038	57167038	16724991	1	207,	0,
#Partially deleted in new
chr7	57167199	57167880	chr7:57167199-57167880	7	+	57167199	57167199	16724991	1	681,	0,
#Partially deleted in new
chr7	57167879	57168651	chr7:57167879-57168651	7	+	57167879	57167879	16724991	1	772,	0,
#Partially deleted in new
chr7	57168724	57169074	chr7:57168724-57169074	7	+	57168724	57168724	16724991	1	350,	0,
#Partially deleted in new
chr7	57169142	57169412	chr7:57169142-57169412	7	+	57169142	57169142	16724991	1	270,	0,
#Partially deleted in new
chr7	57169405	57170771	chr7:57169405-57170771	7	+	57169405	57169405	16724991	1	1366,	0,
#Partially deleted in new
chr7	57170973	57172771	chr7:57170973-57172771	7	+	57170973	57170973	16724991	1	1798,	0,
#Partially deleted in new
chr7	57172771	57173283	chr7:57172771-57173283	7	-	57172771	57172771	16724991	1	512,	0,
#Partially deleted in new
chr7	57173356	57174362	chr7:57173356-57174362	7	+	57173356	57173356	16724991	1	1006,	0,
#Partially deleted in new
chr7	57177408	57180052	chr7:57177408-57180052	7	-	57177408	57177408	16724991	4	120,175,186,184,	0,305,792,2460,
#Deleted in new
chr7	57185787	57186202	chr7:57185787-57186202	7	+	57185787	57185787	16724991	1	415,	0,
#Deleted in new
chr7	57186411	57187441	chr7:57186411-57187441	7	+	57186411	57186411	16724991	1	1030,	0,
#Deleted in new
chr7	57187891	57189437	chr7:57187891-57189437	7	+	57187891	57187891	16724991	1	1546,	0,
#Deleted in new
chr7	57189577	57190226	chr7:57189577-57190226	7	+	57189577	57189577	16724991	1	649,	0,
#Deleted in new
chr7	57190299	57190460	chr7:57190299-57190460	7	+	57190299	57190299	16724991	1	161,	0,
#Deleted in new
chr7	57190460	57191138	chr7:57190460-57191138	7	+	57190460	57190460	16724991	1	678,	0,
#Deleted in new
chr7	57191140	57191927	chr7:57191140-57191927	7	+	57191140	57191140	16724991	1	787,	0,
#Deleted in new
chr7	57191996	57192337	chr7:57191996-57192337	7	+	57191996	57191996	16724991	1	341,	0,
#Deleted in new
chr7	57192404	57192698	chr7:57192404-57192698	7	+	57192404	57192404	16724991	1	294,	0,
#Deleted in new
chr7	57192694	57194068	chr7:57192694-57194068	7	+	57192694	57192694	16724991	1	1374,	0,
#Deleted in new
chr7	57194256	57196054	chr7:57194256-57196054	7	+	57194256	57194256	16724991	1	1798,	0,
#Deleted in new
chr7	57196055	57196564	chr7:57196055-57196564	7	-	57196055	57196055	16724991	1	509,	0,
#Deleted in new
chr7	57196637	57197772	chr7:57196637-57197772	7	+	57196637	57196637	16724991	1	1135,	0,
#Partially deleted in new
chr7	57200824	57203597	chr7:57200824-57203597	7	-	57200824	57200824	16724991	4	143,189,182,206,	0,324,820,2567,
#Partially deleted in new
chr7	57209864	57222159	chr7:57209864-57222159	3	-	57209864	57209864	8553170	2	271,136,	0,12159,
#Deleted in new
chr7	57221168	57222174	chr7:57221168-57222174	1	-	57221168	57221168	789624	2	413,151,	0,855,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	57227000	57227066	chr7:57227000-57227066	3	+	57227000	57227000	8553170	1	66,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	57270838	57275197	chr7:57270838-57275197	7	+	57270838	57270838	16724991	2	115,944,	0,3415,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	57402180	57404717	chr7:57402180-57404717	3	-	57402180	57402180	8553170	1	2537,	0,
#Partially deleted in new
chr7	57404770	57416203	chr7:57404770-57416203	3	+	57404770	57404770	8553170	5	225,126,1214,121,195,	0,3505,6163,8071,11238,
#Partially deleted in new
chr7	57404782	57413541	chr7:57404782-57413541	1	+	57404782	57404782	789624	3	213,126,2608,	0,3493,6151,
#Deleted in new
chr7	57405024	57405090	chr7:57405024-57405090	3	+	57405024	57405024	5263520	1	66,	0,
#Deleted in new
chr7	57422829	57423725	chr7:57422829-57423725	7	-	57422829	57422829	16724991	1	896,	0,
#Deleted in new
chr7	57424502	57425676	chr7:57424502-57425676	7	+	57424502	57424502	16724991	1	1174,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	57450176	57473546	chr7:57450176-57473546	3	+	57450288	57469949	789624	4	151,127,96,4823,	0,12283,12896,18547,
#Deleted in new
chr7	57485165	57485895	chr7:57485165-57485895	7	+	57485165	57485165	16724991	2	79,121,	0,609,
#Partially deleted in new
chr7	57599793	57610104	chr7:57599793-57610104	7	+	57599793	57599793	16724991	2	108,195,	0,10116,
#Partially deleted in new
chr7	57628478	57641954	chr7:57628478-57641954	5	-	57628478	57628478	16724991	4	84,225,99,51,	0,1574,8633,13425,
#Partially deleted in new
chr7	57628961	57637211	chr7:57628961-57637211	4	-	57628961	57628961	16724991	3	145,203,101,	0,1091,8149,
#Deleted in new
chr7	57629284	57630151	chr7:57629284-57630151	7	+	57629284	57629284	16724991	1	867,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	57630080	57645189	chr7:57630080-57645189	7	-	57630080	57630080	16724991	5	175,100,191,76,149,	0,7030,13577,14113,14960,
#Deleted in new
chr7	57638724	57639112	chr7:57638724-57639112	7	+	57638724	57638724	16724991	1	388,	0,
#Deleted in new
chr7	57650380	57651119	chr7:57650380-57651119	7	-	57650380	57650380	16724991	2	120,81,	0,658,
#Deleted in new
chr7	57650520	57650854	chr7:57650520-57650854	7	+	57650520	57650520	16724991	1	334,	0,
#Deleted in new
chr7	57652735	57653459	chr7:57652735-57653459	7	-	57652735	57652735	16724991	2	120,76,	0,648,
#Deleted in new
chr7	57652874	57653208	chr7:57652874-57653208	7	+	57652874	57652874	16724991	1	334,	0,
#Deleted in new
chr7	57654821	57655392	chr7:57654821-57655392	7	+	57654821	57654821	16724991	1	571,	0,
#Deleted in new
chr7	57770618	57770946	chr7:57770618-57770946	7	-	57770618	57770618	16724991	1	328,	0,
#Deleted in new
chr7	57770965	57771173	chr7:57770965-57771173	7	+	57770965	57770965	16724991	1	208,	0,
#Deleted in new
chr7	57772583	57773199	chr7:57772583-57773199	7	-	57772583	57772583	16724991	1	616,	0,
#Deleted in new
chr7	57773182	57773381	chr7:57773182-57773381	7	+	57773182	57773182	16724991	1	199,	0,
#Deleted in new
chr7	57776971	57777521	chr7:57776971-57777521	7	-	57776971	57776971	16724991	1	550,	0,
#Deleted in new
chr7	57817600	57818012	chr7:57817600-57818012	7	-	57817600	57817600	16724991	1	412,	0,
#Deleted in new
chr7	57817995	57818197	chr7:57817995-57818197	7	+	57817995	57817995	16724991	1	202,	0,
#Deleted in new
chr7	57819818	57820627	chr7:57819818-57820627	7	+	57819818	57819818	16724991	2	80,198,	0,611,
#Deleted in new
chr7	57820031	57820410	chr7:57820031-57820410	7	-	57820031	57820031	16724991	1	379,	0,
#Deleted in new
chr7	57822200	57822942	chr7:57822200-57822942	7	+	57822200	57822200	16724991	2	79,121,	0,621,
#Deleted in new
chr7	57822464	57822801	chr7:57822464-57822801	7	-	57822464	57822464	16724991	1	337,	0,
#Partially deleted in new
chr7	57828330	57837046	chr7:57828330-57837046	7	+	57828330	57828330	16724991	3	100,227,80,	0,6927,8636,
#Deleted in new
chr7	57835308	57836251	chr7:57835308-57836251	7	-	57835308	57835308	16724991	1	943,	0,
#Partially deleted in new
chr7	62275360	62275678	chr7:62275360-62275678	7	-	62275360	62275360	16724991	1	318,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	63011462	63011569	chr7:63011462-63011569	3	-	63011462	63011462	8553170	1	107,	0,
#Partially deleted in new
chr7	63044826	63054431	chr7:63044826-63054431	3	-	63044826	63044826	8553170	2	343,76,	0,9529,
#Partially deleted in new
chr7	63057452	63060084	chr7:63057452-63060084	7	+	63057452	63057452	16724991	2	122,153,	0,2479,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	63087069	63088261	chr7:63087069-63088261	7	-	63087069	63087069	16724991	1	1192,	0,
#Partially deleted in new
chr7	63113634	63114805	chr7:63113634-63114805	7	-	63113634	63113634	16724991	1	1171,	0,
#Partially deleted in new
chr7	63117500	63154934	chr7:63117500-63154934	7	-	63117500	63117500	16724991	6	60,138,156,108,111,75,	0,7032,8851,21379,31218,37359,
#Deleted in new
chr7	63175939	63176019	chr7:63175939-63176019	3	-	63175939	63175939	8553170	1	80,	0,
#Partially deleted in new
chr7	63209218	63211822	chr7:63209218-63211822	7	+	63209218	63209218	16724991	2	114,147,	0,2457,
#Deleted in new
chr7	63233034	63234245	chr7:63233034-63234245	7	-	63233034	63233034	16724991	4	243,136,157,78,	0,581,851,1133,
#Partially deleted in new
chr7	63233114	63241645	chr7:63233114-63241645	3	-	63233114	63233114	8553170	3	170,126,55,	0,511,8476,
#Partially deleted in new
chr7	63241589	63248321	chr7:63241589-63248321	7	-	63241589	63241589	16724991	2	177,129,	0,6603,
#Deleted in new
chr7	63263064	63263456	chr7:63263064-63263456	7	+	63263064	63263064	16724991	1	392,	0,
#Partially deleted in new
chr7	63291517	63303988	chr7:63291517-63303988	5	-	63291517	63291517	16724991	4	1309,96,129,39,	0,6175,6746,12432,
#Partially deleted in new
chr7	63291551	63304056	chr7:63291551-63304056	7	-	63291551	63291551	16724991	3	1272,127,107,	0,6714,12398,
#Partially deleted in new
chr7	63326673	63354326	chr7:63326673-63354326	3	-	63326673	63326673	8553170	3	227,210,80,	0,19286,27573,
#Deleted in new
chr7	63342710	63343200	chr7:63342710-63343200	7	+	63342710	63342710	16724991	1	490,	0,
#Deleted in new
chr7	63345839	63346732	chr7:63345839-63346732	7	+	63345839	63345839	16724991	1	893,	0,
#Deleted in new
chr7	63348860	63351773	chr7:63348860-63351773	0	+	63348860	63348860	8553170	1	2913,	0,
#Deleted in new
chr7	63348901	63351769	chr7:63348901-63351769	3	+	63348901	63348901	8553170	2	2113,171,	0,2697,
#Deleted in new
chr7	63349081	63351774	chr7:63349081-63351774	0	+	63349081	63349081	789624	2	467,176,	0,2517,
#Deleted in new
chr7	63349153	63350059	chr7:63349153-63350059	7	-	63349153	63349153	16724991	1	906,	0,
#Deleted in new
chr7	63354032	63354365	chr7:63354032-63354365	7	+	63354032	63354032	16724991	1	333,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	63354456	63359306	chr7:63354456-63359306	3	+	63354456	63354456	8553170	3	119,165,244,	0,688,4606,
#Deleted in new
chr7	63367426	63368156	chr7:63367426-63368156	7	-	63367426	63367426	16724991	1	730,	0,
#Deleted in new
chr7	63377328	63378233	chr7:63377328-63378233	7	+	63377328	63377328	16724991	1	905,	0,
#Partially deleted in new
chr7	63380465	63385789	chr7:63380465-63385789	3	-	63380465	63380465	8553170	2	282,57,	0,5267,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	63388807	63393657	chr7:63388807-63393657	3	-	63388807	63388807	8553170	3	244,165,119,	0,3997,4731,
#Deleted in new
chr7	63393748	63394109	chr7:63393748-63394109	7	-	63393748	63393748	16724991	1	361,	0,
#Partially deleted in new
chr7	63393787	63422046	chr7:63393787-63422046	3	+	63393787	63393787	8553170	4	80,210,300,111,	0,8154,27436,28148,
#Deleted in new
chr7	63394276	63395439	chr7:63394276-63395439	3	+	63394276	63394276	8553170	2	495,178,	0,985,
#Deleted in new
chr7	63396340	63399250	chr7:63396340-63399250	0	-	63396340	63396340	8553170	1	2910,	0,
#Deleted in new
chr7	63396344	63399209	chr7:63396344-63399209	3	-	63396344	63396344	8553170	2	171,2110,	0,755,
#Deleted in new
chr7	63398045	63398957	chr7:63398045-63398957	7	+	63398045	63398045	16724991	1	912,	0,
#Deleted in new
chr7	63401384	63402271	chr7:63401384-63402271	7	-	63401384	63401384	16724991	1	887,	0,
#Deleted in new
chr7	63404841	63405400	chr7:63404841-63405400	7	-	63404841	63404841	16724991	1	559,	0,
#Partially deleted in new
chr7	63449818	63456687	chr7:63449818-63456687	7	+	63449818	63449818	16724991	3	129,96,1309,	0,604,5560,
#Deleted in new
chr7	63480597	63480989	chr7:63480597-63480989	7	-	63480597	63480597	16724991	1	392,	0,
#Partially deleted in new
chr7	63495798	63502536	chr7:63495798-63502536	7	+	63495798	63495798	16724991	2	129,177,	0,6561,
#Deleted in new
chr7	63509302	63510165	chr7:63509302-63510165	7	+	63509302	63509302	16724991	1	863,	0,
#Partially deleted in new
chr7	63556597	63562588	chr7:63556597-63562588	7	+	63556597	63556597	16724991	5	360,138,204,246,141,	0,2044,2304,3478,5850,
#Partially deleted in new
chr7	63567742	63585075	chr7:63567742-63585075	7	-	63567742	63567742	16724991	11	207,78,240,1292,174,116,111,78,122,134,162,	0,846,1118,4564,6963,7948,12334,12548,13134,16296,17171,
#Deleted in new
chr7	63621089	63621169	chr7:63621089-63621169	3	+	63621089	63621089	5263520	1	80,	0,
#Partially deleted in new
chr7	63632607	63636617	chr7:63632607-63636617	7	+	63632607	63632607	16724991	4	171,141,129,129,	0,2926,3314,3881,
#Partially deleted in new
chr7	63699389	63700441	chr7:63699389-63700441	7	+	63699389	63699389	16724991	2	180,43,	0,1009,
#Deleted in new
chr7	63768256	63771047	chr7:63768256-63771047	7	-	63768256	63768256	16724991	2	937,1768,	0,1023,
#Partially deleted in new
chr7	63789908	63790098	chr7:63789908-63790098	7	+	63789908	63789908	16724991	1	190,	0,
#Deleted in new
chr7	63843313	63843505	chr7:63843313-63843505	7	+	63843313	63843313	16724991	1	192,	0,
#Deleted in new
chr7	63876340	63877350	chr7:63876340-63877350	7	+	63876340	63876340	16724991	1	1010,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	63888199	63898841	chr7:63888199-63898841	0	-	63888199	63888199	8553170	3	240,122,80,	0,4965,10562,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	63888199	63899327	chr7:63888199-63899327	3	-	63888199	63888199	8553170	3	240,122,566,	0,4965,10562,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	63888224	63900735	chr7:63888224-63900735	0	-	63888224	63888224	8553170	6	215,147,54,122,73,160,	0,2849,3527,4940,10537,12351,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	63888224	63898909	chr7:63888224-63898909	0	-	63888224	63888224	8553170	4	215,147,122,148,	0,2849,4940,10537,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	63888224	63893478	chr7:63888224-63893478	0	-	63888224	63888224	8553170	2	215,314,	0,4940,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	63888315	63899790	chr7:63888315-63899790	1	-	63888315	63888315	8553170	4	124,122,382,184,	0,4849,10446,11291,
#Deleted in new
chr7	63893285	63894641	chr7:63893285-63894641	7	+	63893285	63893285	16724991	1	1356,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	63898825	63899803	chr7:63898825-63899803	1	-	63898825	63898825	8553170	2	608,197,	0,781,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	63898878	63900794	chr7:63898878-63900794	0	-	63898878	63898878	8553170	2	568,219,	0,1697,
#Partially deleted in new
chr7	63900822	63917994	chr7:63900822-63917994	3	+	63900822	63900822	8553170	4	216,127,94,200,	0,3789,13301,16972,
#Deleted in new
chr7	63908965	63910453	chr7:63908965-63910453	7	-	63908965	63908965	16724991	1	1488,	0,
#Deleted in new
chr7	63924786	63925746	chr7:63924786-63925746	7	-	63924786	63924786	16724991	2	381,42,	0,918,
#Deleted in new
chr7	63924847	63926277	chr7:63924847-63926277	4	-	63924847	63924847	16724991	2	320,424,	0,1006,
#Deleted in new
chr7	63925858	63926306	chr7:63925858-63926306	5	-	63925858	63925858	16724991	1	448,	0,
#Deleted in new
chr7	63931140	63931968	chr7:63931140-63931968	7	+	63931140	63931140	16724991	1	828,	0,
#Deleted in new
chr7	63934448	63935331	chr7:63934448-63935331	7	-	63934448	63934448	16724991	1	883,	0,
#Deleted in new
chr7	63937904	63938509	chr7:63937904-63938509	7	-	63937904	63937904	16724991	1	605,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	63959843	63981477	chr7:63959843-63981477	3	-	63959843	63959843	8553170	4	417,137,91,128,	0,3755,20525,21506,
#Deleted in new
chr7	63963430	63964123	chr7:63963430-63964123	7	-	63963430	63963430	16724991	1	693,	0,
#Deleted in new
chr7	63965833	63966124	chr7:63965833-63966124	7	-	63965833	63965833	16724991	1	291,	0,
#Partially deleted in new
chr7	63980384	63981477	chr7:63980384-63981477	7	-	63980384	63980384	16724991	2	33,166,	0,927,
#Deleted in new
chr7	63993903	63994006	chr7:63993903-63994006	7	+	63993903	63993903	16724991	1	103,	0,
#Partially deleted in new
chr7	63998873	64016130	chr7:63998873-64016130	3	+	63998961	64015920	789624	4	127,127,96,1103,	0,6738,7350,16154,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	64024408	64030102	chr7:64024408-64030102	3	-	64024408	64024408	789624	4	2596,122,76,106,	0,3382,4877,5588,
#Deleted in new
chr7	64024427	64026952	chr7:64024427-64026952	0	-	64024427	64024427	8553170	2	1474,261,	0,2264,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	64027851	64028774	chr7:64027851-64028774	0	-	64027851	64027851	8553170	3	61,220,259,	0,339,664,
#Deleted in new
chr7	64028064	64030105	chr7:64028064-64030105	0	-	64028064	64028064	8553170	3	346,76,109,	0,1221,1932,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	64045428	64114556	chr7:64045428-64114556	3	+	64045428	64045428	8553170	4	196,97,120,1468,	0,50084,67237,67660,
#Partially deleted in new
chr7	64045442	64078549	chr7:64045442-64078549	3	+	64045621	64078549	789624	4	182,127,96,1274,	0,23448,24071,31833,
#Partially deleted in new
chr7	64085559	64086576	chr7:64085559-64086576	7	+	64085559	64085559	16724991	2	290,429,	0,588,
#Partially deleted in new
chr7	64100304	64120544	chr7:64100304-64120544	5	+	64100304	64100304	16724991	7	156,186,211,159,189,153,144,	0,1643,12774,13909,14305,14569,20096,
#Deleted in new
chr7	64104092	64105295	chr7:64104092-64105295	7	-	64104092	64104092	16724991	1	1203,	0,
#Deleted in new
chr7	64105291	64105576	chr7:64105291-64105576	7	-	64105291	64105291	16724991	1	285,	0,
#Deleted in new
chr7	64105653	64105995	chr7:64105653-64105995	7	-	64105653	64105653	16724991	1	342,	0,
#Deleted in new
chr7	64106064	64106819	chr7:64106064-64106819	7	-	64106064	64106064	16724991	1	755,	0,
#Deleted in new
chr7	64106821	64107572	chr7:64106821-64107572	7	-	64106821	64106821	16724991	2	556,117,	0,634,
#Deleted in new
chr7	64107828	64108486	chr7:64107828-64108486	7	-	64107828	64107828	16724991	1	658,	0,
#Deleted in new
chr7	64108624	64110147	chr7:64108624-64110147	7	-	64108624	64108624	16724991	1	1523,	0,
#Deleted in new
chr7	64110546	64111550	chr7:64110546-64111550	7	-	64110546	64110546	16724991	1	1004,	0,
#Deleted in new
chr7	64111751	64112572	chr7:64111751-64112572	7	-	64111751	64111751	16724991	1	821,	0,
#Partially deleted in new
chr7	64120430	64150721	chr7:64120430-64150721	7	+	64120430	64120430	16724991	2	115,525,	0,29766,
#Partially deleted in new
chr7	64140494	64150058	chr7:64140494-64150058	3	+	64140494	64140494	8553170	3	29,47,372,	0,1215,9192,
#Partially deleted in new
chr7	64141537	64142401	chr7:64141537-64142401	7	-	64141537	64141537	16724991	1	864,	0,
#Deleted in new
chr7	64149684	64150432	chr7:64149684-64150432	7	-	64149684	64149684	16724991	1	748,	0,
#Deleted in new
chr7	64180005	64180892	chr7:64180005-64180892	7	-	64180005	64180005	16724991	1	887,	0,
#Deleted in new
chr7	64181709	64182893	chr7:64181709-64182893	7	+	64181709	64181709	16724991	1	1184,	0,
#Partially deleted in new
chr7	64207089	64220508	chr7:64207089-64220508	3	+	64207202	64220290	789624	4	152,127,96,1195,	0,6002,6923,12224,
#Partially deleted in new
chr7	64228473	64266931	chr7:64228473-64266931	3	+	64249117	64266869	789624	5	179,129,127,96,1036,	0,20554,31747,32360,37422,
#Partially deleted in new
chr7	64249117	64266930	chr7:64249117-64266930	1	+	64249117	64266869	789624	4	39,127,96,1035,	0,11103,11716,16778,
#Partially deleted in new
chr7	64307458	64314017	chr7:64307458-64314017	0	+	64307458	64307458	8553170	4	224,165,44,145,	0,1002,5349,6414,
#Partially deleted in new
chr7	64307537	64310473	chr7:64307537-64310473	0	+	64307537	64307537	8553170	4	331,335,165,196,	0,443,923,2740,
#Deleted in new
chr7	64308156	64308791	chr7:64308156-64308791	0	+	64308156	64308156	8553170	2	159,331,	0,304,
#Deleted in new
chr7	64310058	64310482	chr7:64310058-64310482	0	+	64310058	64310058	8553170	1	424,	0,
#Partially deleted in new
chr7	64310827	64336285	chr7:64310827-64336285	0	+	64314150	64336285	789624	4	210,44,281,27,	0,1980,3045,25431,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	64312807	64349639	chr7:64312807-64349639	1	+	64314150	64349147	789624	5	44,281,127,96,1550,	0,1065,23451,24079,35282,
#Partially deleted in new
chr7	64314013	64337362	chr7:64314013-64337362	0	+	64314013	64314013	8553170	3	140,127,476,	0,22245,22873,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	64314028	64354860	chr7:64314028-64354860	3	+	64314150	64349147	789624	4	125,127,96,6771,	0,22230,22858,34061,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	64355077	64356199	chr7:64355077-64356199	7	+	64355077	64355077	16724991	2	304,524,	0,598,
#Deleted in new
chr7	64425622	64426334	chr7:64425622-64426334	7	-	64425622	64425622	16724991	2	85,126,	0,586,
#Partially deleted in new
chr7	64433829	64434592	chr7:64433829-64434592	7	+	64433829	64433829	16724991	1	763,	0,
#Deleted in new
chr7	64443801	64444742	chr7:64443801-64444742	7	-	64443801	64443801	16724991	1	941,	0,
#Deleted in new
chr7	64469184	64470653	chr7:64469184-64470653	7	+	64469184	64469184	16724991	1	1469,	0,
#Deleted in new
chr7	64500824	64501729	chr7:64500824-64501729	7	+	64500824	64500824	16724991	1	905,	0,
#Partially deleted in new
chr7	64519883	64563106	chr7:64519883-64563106	3	-	64521160	64562954	789624	4	2617,96,127,182,	0,23823,24422,43041,
#Partially deleted in new
chr7	64521925	64563022	chr7:64521925-64563022	0	-	64521925	64521925	8553170	3	575,96,98,	0,21781,40999,
#Partially deleted in new
chr7	64522449	64544219	chr7:64522449-64544219	0	-	64522449	64522449	8553170	2	51,513,	0,21257,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	64524698	64563041	chr7:64524698-64563041	1	-	64526398	64562954	789624	4	1819,96,127,117,	0,19008,19607,38226,
#Partially deleted in new
chr7	64544345	64563075	chr7:64544345-64563075	0	-	64544345	64544345	8553170	3	87,328,151,	0,16600,18579,
#Deleted in new
chr7	64551497	64552066	chr7:64551497-64552066	7	+	64551497	64551497	16724991	1	569,	0,
#Partially deleted in new
chr7	64566813	64567443	chr7:64566813-64567443	7	-	64566813	64566813	16724991	2	201,114,	0,516,
#Deleted in new
chr7	64569427	64570437	chr7:64569427-64570437	7	-	64569427	64569427	16724991	1	1010,	0,
#Deleted in new
chr7	64582732	64583207	chr7:64582732-64583207	7	+	64582732	64582732	16724991	1	475,	0,
#Deleted in new
chr7	64590598	64591133	chr7:64590598-64591133	7	-	64590598	64590598	16724991	1	535,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	64666082	64711582	chr7:64666082-64711582	1	+	64666282	64708656	789624	3	203,127,5259,	0,25165,40241,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	64666082	64711582	chr7:64666082-64711582	3	+	64666282	64708656	789624	4	203,127,96,5259,	0,25165,25782,40241,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	64666197	64711026	chr7:64666197-64711026	1	+	64691941	64708656	789624	5	88,160,127,96,4703,	0,12979,25050,25667,40126,
#Partially deleted in new
chr7	64678953	64687393	chr7:64678953-64687393	7	-	64678953	64678953	16724991	2	94,469,	0,7971,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	64679063	64679176	chr7:64679063-64679176	3	+	64679063	64679063	5263520	1	113,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	64679172	64711582	chr7:64679172-64711582	1	+	64691941	64708656	789624	5	164,127,127,96,5259,	0,11226,12075,12692,27151,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	64689354	64711023	chr7:64689354-64711023	1	+	64691941	64708656	789624	4	1171,127,96,4700,	0,1893,2510,16969,
#Deleted in new
chr7	64735932	64736743	chr7:64735932-64736743	7	-	64735932	64735932	16724991	1	811,	0,
#Partially deleted in new
chr7	64768155	64769101	chr7:64768155-64769101	7	+	64768155	64768155	16724991	2	55,131,	0,815,
#Partially deleted in new
chr7	64794387	64832202	chr7:64794387-64832202	1	+	64794568	64832202	789624	4	184,127,78,752,	0,20530,21188,37063,
#Partially deleted in new
chr7	64794387	64833681	chr7:64794387-64833681	1	+	64794568	64831486	789624	4	184,127,137,2231,	0,20530,36552,37063,
#Partially deleted in new
chr7	64794424	64832242	chr7:64794424-64832242	3	+	64794568	64832202	789624	3	147,127,792,	0,20493,37026,
#Partially deleted in new
chr7	64794424	64831803	chr7:64794424-64831803	1	+	64794568	64831486	789624	5	147,127,78,137,353,	0,20493,21151,36515,37026,
#Partially deleted in new
chr7	64794427	64833664	chr7:64794427-64833664	1	+	64814932	64832202	789624	4	144,89,127,2214,	0,19631,20490,37023,
#Partially deleted in new
chr7	64794427	64833327	chr7:64794427-64833327	1	+	64794568	64815630	789624	4	144,127,82,1877,	0,20490,21144,37023,
#Partially deleted in new
chr7	64794489	64833676	chr7:64794489-64833676	0	+	64794489	64794489	8553170	2	82,2226,	0,36961,
#Partially deleted in new
chr7	64852396	64853354	chr7:64852396-64853354	7	-	64852396	64852396	16724991	1	958,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	64862998	64864370	chr7:64862998-64864370	7	+	64862998	64862998	16724991	2	502,378,	0,994,
#Partially deleted in new
chr7	64870171	64889855	chr7:64870171-64889855	0	+	64870171	64870171	8553170	3	210,790,1283,	0,9278,18401,
#Partially deleted in new
chr7	64877659	64879731	chr7:64877659-64879731	0	+	64877659	64877659	8553170	3	215,115,282,	0,721,1790,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	64882492	64929124	chr7:64882492-64929124	0	+	64882492	64882492	8553170	8	293,45,150,707,89,127,96,1471,	0,10919,11255,14855,34537,35088,35704,45161,
#Partially deleted in new
chr7	64882512	64888868	chr7:64882512-64888868	0	+	64882512	64882512	8553170	2	273,296,	0,6060,
#Partially deleted in new
chr7	64888526	64890100	chr7:64888526-64890100	3	-	64888526	64888526	8553170	3	291,122,649,	0,539,925,
#Partially deleted in new
chr7	64903246	64929257	chr7:64903246-64929257	3	+	64903317	64929038	789624	4	173,127,96,1604,	0,14334,14950,24407,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	64903252	64924431	chr7:64903252-64924431	0	+	64903252	64903252	8553170	5	114,89,127,96,1046,	0,13777,14328,14944,20133,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	64903287	64930966	chr7:64903287-64930966	0	+	64903317	64917590	789624	5	132,89,127,96,3313,	0,13742,14293,14909,24366,
#Partially deleted in new
chr7	64933272	64933616	chr7:64933272-64933616	7	+	64933272	64933272	16724991	1	344,	0,
#Partially deleted in new
chr7	64942142	64942926	chr7:64942142-64942926	7	-	64942142	64942142	16724991	1	784,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	64971775	64991036	chr7:64971775-64991036	3	-	64978118	64981420	789624	4	7761,96,133,1090,	0,9611,10208,18171,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	64974451	64982119	chr7:64974451-64982119	1	-	64978118	64981420	789624	3	5085,96,136,	0,6935,7532,
#Deleted in new
chr7	64976784	64982021	chr7:64976784-64982021	1	-	64976906	64981420	789624	4	439,801,96,38,	0,1951,4602,5199,
#Partially deleted in new
chr7	64979922	65006684	chr7:64979922-65006684	0	-	64979922	64979922	8553170	3	1560,133,144,	0,2061,26618,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	64990808	65006653	chr7:64990808-65006653	3	-	64991211	64993026	789624	2	2606,113,	0,15732,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	65003668	65006743	chr7:65003668-65006743	0	-	65003668	65003668	8553170	2	1526,203,	0,2872,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	65006083	65006659	chr7:65006083-65006659	0	-	65006083	65006083	8553170	2	239,119,	0,457,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	65023203	65023310	chr7:65023203-65023310	3	-	65023203	65023203	8553170	1	107,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	65038353	65074713	chr7:65038353-65074713	7	+	65038353	65038353	16724991	9	212,135,174,106,155,1776,134,74,936,	0,26645,27899,28591,30102,30355,32555,35087,35424,
#Partially deleted in new
chr7	65038359	65074713	chr7:65038359-65074713	5	+	65038359	65038359	16724991	11	206,135,174,106,155,82,97,139,134,74,936,	0,26639,27893,28585,30096,30349,31301,31986,32549,35081,35418,
#Deleted in new
chr7	65038371	65038565	chr7:65038371-65038565	7	+	65038371	65038371	16724991	1	194,	0,
#Partially deleted in new
chr7	65064998	65073848	chr7:65064998-65073848	5	+	65064998	65064998	16724991	12	135,174,106,115,153,82,97,139,134,103,74,71,	0,1254,1946,3076,3459,3710,4662,5347,5910,7146,8442,8779,
#Deleted in new
chr7	65065998	65066132	chr7:65065998-65066132	3	+	65065998	65065998	5263520	1	134,	0,
#Deleted in new
chr7	65070537	65070672	chr7:65070537-65070672	3	+	65070537	65070537	5263520	1	135,	0,
#Partially deleted in new
chr7	65075022	65078780	chr7:65075022-65078780	7	+	65075022	65075022	16724991	2	75,157,	0,3601,
#Partially deleted in new
chr7	65084102	65100232	chr7:65084102-65100232	7	+	65084102	65084102	16724991	6	155,66,59,73,179,54,	0,3657,6561,7777,14551,16076,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr7	65141031	65234204	chr7:65141031-65234204	7	+	65141031	65141031	16724991	17	377,121,72,175,206,143,116,121,158,90,81,60,160,144,123,396,1140,	0,11985,26717,29155,38260,41942,44358,45358,47948,51127,59586,68722,71241,71619,89474,90509,92033,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	65141224	65234216	chr7:65141224-65234216	5	+	65141224	65141224	16724991	13	184,121,72,175,206,143,116,121,158,81,60,396,1152,	0,11792,26524,28962,38067,41749,44165,45165,47755,59393,68529,90316,91840,
#Partially deleted in new
chr7	65141240	65212794	chr7:65141240-65212794	5	+	65141240	65141240	16724991	15	168,89,121,72,175,206,143,116,121,158,81,121,60,160,144,	0,9012,11776,26508,28946,38051,41733,44149,45149,47739,59377,61276,68513,71032,71410,
#Partially deleted in new
chr7	65235789	65236723	chr7:65235789-65236723	7	-	65235789	65235789	16724991	2	88,224,	0,710,
#Deleted in new
chr7	65247607	65247758	chr7:65247607-65247758	7	-	65247607	65247607	16724991	1	151,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	65290428	65292776	chr7:65290428-65292776	7	+	65290428	65290428	16724991	4	49,107,514,285,	0,468,1194,2063,
#Partially deleted in new
chr7	65335173	65335668	chr7:65335173-65335668	7	-	65335173	65335173	16724991	1	495,	0,
#Deleted in new
chr7	65355933	65357176	chr7:65355933-65357176	7	+	65355933	65355933	16724991	1	1243,	0,
#Partially deleted in new
chr7	65373798	65401125	chr7:65373798-65401125	1	+	65373997	65399875	789624	4	202,127,96,2785,	0,14103,15007,24542,
#Partially deleted in new
chr7	65373798	65401135	chr7:65373798-65401135	3	+	65373997	65399875	789624	3	202,127,2795,	0,14103,24542,
#Partially deleted in new
chr7	65373837	65388320	chr7:65373837-65388320	0	+	65373837	65373837	8553170	2	163,419,	0,14064,
#Partially deleted in new
chr7	65373838	65401125	chr7:65373838-65401125	1	+	65398342	65399875	789624	2	162,2785,	0,24502,
#Partially deleted in new
chr7	65373880	65401081	chr7:65373880-65401081	1	+	65388882	65399875	789624	3	120,96,2741,	0,14925,24460,
#Partially deleted in new
chr7	65463070	65463438	chr7:65463070-65463438	3	+	65463070	65463070	8553170	2	98,66,	0,302,
#Deleted in new
chr7	65508772	65508944	chr7:65508772-65508944	7	-	65508772	65508772	16724991	1	172,	0,
#Partially deleted in new
chr7	65525628	65554744	chr7:65525628-65554744	7	-	65525628	65525628	16724991	4	175,72,121,167,	0,2541,17225,28949,
#Partially deleted in new
chr7	65617081	65619153	chr7:65617081-65619153	7	+	65617081	65617081	16724991	3	135,155,138,	0,566,1934,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	65647009	65770810	chr7:65647009-65770810	7	-	65647009	65647009	16724991	8	1032,86,137,133,89,54,87,344,	0,1325,1835,2408,24141,80045,115921,123457,
#Partially deleted in new
chr7	65647822	65718688	chr7:65647822-65718688	7	+	65647822	65647822	16724991	15	225,89,121,72,175,206,143,116,134,158,81,131,60,160,148,	0,9112,11857,26562,28986,37779,41485,43905,44900,47185,58523,60591,67825,70340,70718,
#Partially deleted in new
chr7	65647863	65715661	chr7:65647863-65715661	4	+	65647863	65647863	16724991	11	184,121,72,175,206,143,116,134,158,81,14,	0,11816,26521,28945,37738,41444,43864,44859,47144,58482,67784,
#Partially deleted in new
chr7	65751141	65763336	chr7:65751141-65763336	5	+	65751141	65751141	16724991	14	137,39,135,173,106,115,155,82,97,139,133,103,74,56,	0,1022,3385,4638,5327,6461,6841,7094,8033,8718,9282,10504,11805,12139,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	65751141	65763354	chr7:65751141-65763354	5	+	65751141	65751141	16724991	11	137,147,173,106,155,82,97,139,133,74,74,	0,1022,4638,5327,6841,7094,8033,8718,9282,11805,12139,
#Partially deleted in new
chr7	65751141	65763354	chr7:65751141-65763354	7	+	65751141	65751141	16724991	10	137,173,106,155,82,97,139,133,74,74,	0,4638,5327,6841,7094,8033,8718,9282,11805,12139,
#Partially deleted in new
chr7	65755525	65755659	chr7:65755525-65755659	3	+	65755525	65755525	789624	1	134,	0,
#Partially deleted in new
chr7	65760051	65760186	chr7:65760051-65760186	3	+	65760051	65760051	5263520	1	135,	0,
#Partially deleted in new
chr7	65764534	65768306	chr7:65764534-65768306	7	+	65764534	65764534	16724991	2	72,166,	0,3606,
#Partially deleted in new
chr7	65770472	65770720	chr7:65770472-65770720	5	-	65770472	65770472	16724991	1	248,	0,
#Partially deleted in new
chr7	65773619	65802067	chr7:65773619-65802067	7	+	65773619	65773619	16724991	7	107,64,59,76,184,61,180,	0,3612,6520,7713,14459,15995,28268,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	65814671	65814775	chr7:65814671-65814775	3	+	65814671	65814671	8553170	1	104,	0,
#Deleted in new
chr7	65840211	65840596	chr7:65840211-65840596	7	+	65840211	65840211	16724991	1	385,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	65859659	65859766	chr7:65859659-65859766	3	-	65859659	65859659	8553170	1	107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	65873165	65959563	chr7:65873165-65959563	1	+	65873230	65954300	8553170	3	400,110,5490,	0,75505,80908,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	65873269	65959563	chr7:65873269-65959563	3	+	65873371	65954300	789624	3	296,110,5490,	0,75401,80804,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	65873269	65959562	chr7:65873269-65959562	1	+	65873371	65954300	8553170	3	296,110,5489,	0,75401,80804,
#Partially deleted in new
chr7	65873368	65955417	chr7:65873368-65955417	1	+	65873371	65954413	789624	2	197,1344,	0,80705,
#Partially deleted in new
chr7	65960683	65982314	chr7:65960683-65982314	3	-	65960896	65982183	0	12	380,136,177,85,147,179,153,188,143,185,186,341,	0,3639,7047,9598,13611,13842,14235,15331,18715,19043,19540,21290,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	65960687	65976160	chr7:65960687-65976160	0	-	65960687	65960687	8553170	4	376,136,177,1866,	0,3635,7043,13607,
#Partially deleted in new
chr7	65960697	65982215	chr7:65960697-65982215	0	-	65976193	65982183	789624	10	366,136,177,85,147,179,153,188,186,242,	0,3625,7033,9584,13597,13828,14221,15317,19526,21276,
#Partially deleted in new
chr7	65960697	65982196	chr7:65960697-65982196	0	-	65979502	65982183	789624	11	366,136,177,85,147,179,153,188,143,186,223,	0,3625,7033,9584,13597,13828,14221,15317,18701,19526,21276,
#Partially deleted in new
chr7	65960700	65982211	chr7:65960700-65982211	1	-	65960896	65982183	0	10	363,136,177,85,147,179,153,78,186,238,	0,3622,7030,9581,13594,13825,14218,19133,19523,21273,
#Partially deleted in new
chr7	65964145	65967908	chr7:65964145-65967908	0	-	65964145	65964145	8553170	2	313,178,	0,3585,
#Partially deleted in new
chr7	65964329	65974847	chr7:65964329-65974847	0	-	65964329	65964329	8553170	5	129,177,85,107,322,	0,3401,5952,9965,10196,
#Partially deleted in new
chr7	65974293	65979508	chr7:65974293-65979508	0	-	65974293	65974293	8553170	4	148,179,188,110,	0,232,1721,5105,
#Partially deleted in new
chr7	65974356	65980411	chr7:65974356-65980411	0	-	65974356	65974356	8553170	3	85,179,188,	0,169,5867,
#Partially deleted in new
chr7	65974403	65975006	chr7:65974403-65975006	0	-	65974403	65974403	8553170	2	38,481,	0,122,
#Partially deleted in new
chr7	65974502	65982088	chr7:65974502-65982088	0	-	65974502	65974502	8553170	3	202,188,115,	0,1512,7471,
#Partially deleted in new
chr7	65975011	65981971	chr7:65975011-65981971	0	-	65975011	65975011	8553170	6	60,188,143,78,186,121,	0,1003,4387,4822,5212,6839,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	65975851	65982213	chr7:65975851-65982213	0	-	65979502	65982183	789624	4	351,156,186,240,	0,3534,4372,6122,
#Deleted in new
chr7	65979477	65980829	chr7:65979477-65980829	0	-	65979477	65979477	8553170	4	64,185,186,136,	0,249,746,1216,
#Deleted in new
chr7	66004016	66004137	chr7:66004016-66004137	7	+	66004016	66004016	16724991	1	121,	0,
#Partially deleted in new
chr7	66025125	66031544	chr7:66025125-66031544	7	-	66025125	66025125	16724991	3	166,99,41,	0,3433,6378,
#Deleted in new
chr7	66070903	66071318	chr7:66070903-66071318	7	-	66070903	66070903	16724991	1	415,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr7	66075797	66093558	chr7:66075797-66093558	3	+	66076081	66092912	0	17	59,55,195,84,57,98,78,78,53,63,115,85,60,84,81,107,791,	0,241,6005,6570,7082,7279,10787,10946,11536,11931,13009,13293,13478,13814,16208,16759,16970,
#Partially deleted in new
chr7	66075833	66087160	chr7:66075833-66087160	0	+	66075833	66075833	8553170	8	23,55,195,84,57,98,78,417,	0,205,5969,6534,7046,7243,10751,10910,
#Partially deleted in new
chr7	66075840	66083343	chr7:66075840-66083343	0	+	66075840	66075840	8553170	4	253,195,84,464,	0,5962,6527,7039,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	66075865	66093144	chr7:66075865-66093144	1	+	66076081	66092912	0	15	228,195,84,57,98,78,53,63,115,85,60,84,81,107,377,	0,5937,6502,7014,7211,10719,11468,11863,12941,13225,13410,13746,16140,16691,16902,
#Partially deleted in new
chr7	66075873	66092931	chr7:66075873-66092931	1	+	66076081	66092912	0	16	220,195,84,57,98,78,78,53,63,115,85,60,84,81,107,164,	0,5929,6494,7006,7203,10711,10870,11460,11855,12933,13217,13402,13738,16132,16683,16894,
#Partially deleted in new
chr7	66075879	66089178	chr7:66075879-66089178	0	+	66076081	66089178	789624	10	214,84,57,98,78,78,53,63,115,88,	0,6488,7000,7197,10705,10864,11454,11849,12927,13211,
#Partially deleted in new
chr7	66075883	66092917	chr7:66075883-66092917	1	+	66076081	66092912	0	15	210,195,84,57,98,78,78,53,63,115,85,84,81,107,150,	0,5919,6484,6996,7193,10701,10860,11450,11845,12923,13207,13728,16122,16673,16884,
#Partially deleted in new
chr7	66087692	66092921	chr7:66087692-66092921	0	+	66087692	66087692	8553170	7	99,115,245,84,81,107,154,	0,1114,1398,1919,4313,4864,5075,
#Partially deleted in new
chr7	66087760	66152277	chr7:66087760-66152277	3	+	66087760	66152277	789624	12	31,115,85,60,84,81,107,37,99,95,58,70,	0,1046,1330,1515,1851,4245,4796,39943,42983,46519,57682,64447,
#Partially deleted in new
chr7	66089088	66092954	chr7:66089088-66092954	0	+	66089088	66089088	8553170	3	87,60,51,	0,187,3815,
#Partially deleted in new
chr7	66089238	66092954	chr7:66089238-66092954	0	+	66089238	66089238	8553170	6	97,84,84,81,107,187,	0,373,2487,2767,3318,3529,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	66114603	66154568	chr7:66114603-66154568	0	+	66114962	66130210	789624	7	367,37,122,99,95,58,2361,	0,13100,15523,16140,19676,30839,37604,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	66114604	66154561	chr7:66114604-66154561	3	+	66114962	66152357	789624	6	366,37,99,95,58,2354,	0,13099,16139,19675,30838,37603,
#Partially deleted in new
chr7	66114825	66152870	chr7:66114825-66152870	1	+	66114828	66152357	789624	5	89,37,95,58,663,	0,12878,19454,30617,37382,
#Partially deleted in new
chr7	66114840	66152511	chr7:66114840-66152511	1	+	66114962	66152357	789624	3	130,58,304,	0,30602,37367,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	66114849	66153289	chr7:66114849-66153289	1	+	66114962	66152357	789624	5	121,37,95,58,1082,	0,12854,19430,30593,37358,
#Partially deleted in new
chr7	66114858	66134489	chr7:66114858-66134489	0	+	66114858	66114858	8553170	4	112,37,99,210,	0,12845,15885,19421,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	66119602	66165011	chr7:66119602-66165011	3	-	66119602	66119602	8553170	4	140,178,57,29,	0,950,9063,45380,
#Partially deleted in new
chr7	66150662	66152652	chr7:66150662-66152652	0	+	66150662	66150662	8553170	2	286,445,	0,1545,
#Partially deleted in new
chr7	66205198	66360443	chr7:66205198-66360443	3	+	66240425	66356842	0	6	324,946,199,51,47,549,	0,35126,81312,147306,151626,154696,
#Partially deleted in new
chr7	66205316	66240550	chr7:66205316-66240550	0	+	66240425	66240550	789624	3	206,128,226,	0,477,35008,
#Partially deleted in new
chr7	66205333	66359473	chr7:66205333-66359473	0	+	66205333	66205333	8553170	5	189,199,51,47,438,	0,81177,147171,151491,153702,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	66205384	66360426	chr7:66205384-66360426	1	+	66240425	66356842	789624	7	138,52,946,199,51,47,532,	0,4468,34940,81126,147120,151440,154510,
#Partially deleted in new
chr7	66221603	66240847	chr7:66221603-66240847	0	+	66240425	66240847	789624	2	39,523,	0,18721,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	66344302	66344414	chr7:66344302-66344414	3	+	66344302	66344302	8553170	1	112,	0,
#Partially deleted in new
chr7	66352503	66420543	chr7:66352503-66420543	0	+	66352503	66352503	8553170	3	52,47,149,	0,4321,67891,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	66376043	66401338	chr7:66376043-66401338	1	-	66376043	66376043	8553170	7	3960,195,78,104,116,105,144,	0,6193,19835,23648,24278,24879,25151,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	66379826	66395919	chr7:66379826-66395919	0	-	66379826	66379826	8553170	4	177,191,147,41,	0,2410,10277,16052,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr7	66388324	66491616	chr7:66388324-66491616	0	-	66388324	66388324	8553170	23	1926,78,104,116,105,89,75,185,88,92,79,134,170,166,38,69,88,55,59,59,90,170,586,	0,7554,11367,11997,12598,14132,18965,20735,23290,39624,41354,41559,50810,61746,79357,87934,90684,92069,93216,96770,99624,101613,102706,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr7	66388634	66491456	chr7:66388634-66491456	2	-	66388634	66388634	8553170	24	211,1066,104,116,105,200,89,75,185,88,92,79,134,170,166,195,38,69,88,55,59,59,170,426,	0,550,11057,11687,12288,12560,13822,18655,20425,22980,39314,41044,41249,50500,61436,67024,79047,87624,90374,91759,92906,96460,101303,102396,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	66390130	66393729	chr7:66390130-66393729	0	-	66390130	66390130	8553170	2	120,400,	0,3199,
#Partially deleted in new
chr7	66407287	66409239	chr7:66407287-66409239	7	-	66407287	66407287	16724991	3	63,57,181,	0,460,1771,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	66423147	66493355	chr7:66423147-66493355	0	-	66423147	66423147	8553170	12	731,92,170,166,88,55,59,59,90,170,441,140,	0,4801,15987,26923,55861,57246,58393,61947,64801,66790,67883,70068,
#Deleted in new
chr7	66423404	66423893	chr7:66423404-66423893	7	-	66423404	66423404	16724991	1	489,	0,
#Partially deleted in new
chr7	66434633	66435154	chr7:66434633-66435154	7	-	66434633	66434633	16724991	1	521,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	66474555	66475749	chr7:66474555-66475749	3	+	66474555	66474555	8553170	1	1194,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	66476244	66493517	chr7:66476244-66493517	0	-	66476244	66476244	8553170	11	83,88,55,59,59,90,170,209,122,66,302,	0,2764,4149,5296,8850,11704,13693,14786,15105,16029,16971,
#Partially deleted in new
chr7	66480393	66490108	chr7:66480393-66490108	7	-	66480393	66480393	16724991	4	55,59,87,64,	0,1147,2407,9651,
#Partially deleted in new
chr7	66485094	66486532	chr7:66485094-66486532	7	-	66485094	66485094	16724991	2	59,80,	0,1358,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	66492008	66493566	chr7:66492008-66493566	0	-	66492008	66492008	8553170	2	331,351,	0,1207,
#Partially deleted in new
chr7	66493705	66495474	chr7:66493705-66495474	3	+	66493705	66493705	789624	2	320,220,	0,1549,
#Partially deleted in new
chr7	66493785	66495472	chr7:66493785-66495472	0	+	66493785	66493785	8553170	2	236,218,	0,1469,
#Partially deleted in new
chr7	66505154	66506223	chr7:66505154-66506223	7	-	66505154	66505154	16724991	1	1069,	0,
#Partially deleted in new
chr7	66511555	66545066	chr7:66511555-66545066	7	+	66511555	66511555	16724991	8	95,186,50,57,84,179,30,31,	0,1708,6929,7192,9435,10616,11375,33480,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	66526087	66542549	chr7:66526087-66542549	5	-	66526087	66526087	16724991	2	5784,1308,	0,15154,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	66530296	66592386	chr7:66530296-66592386	6	-	66530296	66530296	16724991	6	1103,81,86,253,166,130,	0,1494,15304,24288,43088,61960,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	66530523	66592363	chr7:66530523-66592363	4	-	66530523	66530523	16724991	9	1348,227,140,86,253,97,166,178,107,	0,10718,11979,15077,24061,30055,42861,46231,61733,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	66539623	66542624	chr7:66539623-66542624	4	-	66539623	66539623	16724991	3	262,227,539,	0,1618,2462,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	66553484	66592397	chr7:66553484-66592397	5	-	66553484	66553484	16724991	6	1353,166,175,199,69,141,	0,19900,23270,25044,35027,38772,
#Deleted in new
chr7	66553804	66554199	chr7:66553804-66554199	7	-	66553804	66553804	16724991	1	395,	0,
#Partially deleted in new
chr7	66554587	66576923	chr7:66554587-66576923	5	-	66554587	66554587	16724991	3	250,163,166,	0,18801,22170,
#Deleted in new
chr7	66556215	66557065	chr7:66556215-66557065	7	+	66556215	66556215	16724991	1	850,	0,
#Deleted in new
chr7	66556888	66557362	chr7:66556888-66557362	7	-	66556888	66556888	16724991	1	474,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	66584102	66592386	chr7:66584102-66592386	4	-	66584102	66584102	16724991	3	364,69,130,	0,4409,8154,
#Partially deleted in new
chr7	66606737	66607107	chr7:66606737-66607107	7	-	66606737	66606737	16724991	1	370,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	66628766	66644015	chr7:66628766-66644015	3	+	66629064	66639232	789624	4	442,170,179,5160,	0,4508,9486,10089,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	66628884	66643017	chr7:66628884-66643017	1	+	66629064	66639179	789624	4	324,170,139,4162,	0,4390,9368,9971,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	66628884	66643032	chr7:66628884-66643032	1	+	66629064	66640009	789624	5	324,170,179,373,3072,	0,4390,9368,9971,11076,
#Partially deleted in new
chr7	66628942	66640565	chr7:66628942-66640565	1	+	66629064	66640394	789624	5	266,170,179,373,172,	0,4332,9310,9913,11451,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	66629052	66643024	chr7:66629052-66643024	1	+	66629064	66638499	789624	3	156,170,4772,	0,4222,9200,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	66629053	66643026	chr7:66629053-66643026	1	+	66629064	66640009	789624	6	155,170,179,74,101,3066,	0,4221,9199,9802,10074,10907,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	66629069	66643016	chr7:66629069-66643016	0	+	66629069	66638970	789624	4	139,179,373,3056,	0,9183,9786,10891,
#Partially deleted in new
chr7	66629086	66639993	chr7:66629086-66639993	0	+	66629086	66639993	789624	5	122,170,139,74,33,	0,4188,9166,9769,10874,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	66629090	66643029	chr7:66629090-66643029	0	+	66629090	66638970	789624	3	118,179,4174,	0,9162,9765,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	66629194	66649067	chr7:66629194-66649067	0	+	66629194	66647980	789624	6	14,170,179,74,77,1190,	0,4080,9058,9661,14340,18683,
#Partially deleted in new
chr7	66638855	66642763	chr7:66638855-66642763	0	+	66638855	66642390	789624	2	373,482,	0,3426,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	66654537	66666299	chr7:66654537-66666299	1	+	66654537	66654537	8553170	3	89,118,186,	0,10632,11576,
#Partially deleted in new
chr7	66654550	66669298	chr7:66654550-66669298	3	+	66654550	66654550	789624	4	76,213,150,69,	0,12847,14213,14679,
#Partially deleted in new
chr7	66654585	66669855	chr7:66654585-66669855	0	+	66654585	66654585	8553170	3	41,150,113,	0,14178,15157,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	66682163	66809662	chr7:66682163-66809662	0	+	66771899	66795524	789624	10	95,58,797,196,167,82,133,92,257,777,	0,30003,57832,89719,93063,113347,115210,117159,122976,126722,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	66739828	66740385	chr7:66739828-66740385	3	-	66739828	66739828	8553170	1	557,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	66739974	66811459	chr7:66739974-66811459	1	+	66795573	66809284	789624	8	818,196,167,82,133,92,257,2574,	0,31908,35252,55536,57399,59348,65165,68911,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	66740655	66811459	chr7:66740655-66811459	1	+	66771899	66809284	789624	7	137,196,166,131,92,257,2574,	0,31227,34571,56720,58667,64484,68230,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	66740732	66811464	chr7:66740732-66811464	3	+	66771899	66809284	789624	9	60,196,167,167,82,133,92,257,2579,	0,31150,34494,42942,54778,56641,58590,64407,68153,
#Partially deleted in new
chr7	66740732	66772035	chr7:66740732-66772035	0	+	66771899	66772035	789624	4	60,195,145,153,	0,28098,29590,31150,
#Partially deleted in new
chr7	66740732	66809817	chr7:66740732-66809817	1	+	66771899	66809284	789624	10	60,195,196,167,167,82,133,92,257,932,	0,28098,31150,34494,42942,54778,56641,58590,64407,68153,
#Partially deleted in new
chr7	66748837	66749077	chr7:66748837-66749077	7	-	66748837	66748837	16724991	1	240,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	66755881	66811459	chr7:66755881-66811459	1	+	66756052	66809284	789624	9	196,196,167,167,82,133,92,257,2574,	0,16001,19345,27793,39629,41492,43441,49258,53004,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	66755888	66810667	chr7:66755888-66810667	1	+	66756055	66809284	789624	9	189,196,167,167,82,133,92,257,1782,	0,15994,19338,27786,39622,41485,43434,49251,52997,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	66797371	66808064	chr7:66797371-66808064	0	+	66797371	66797371	8553170	4	135,92,257,227,	0,1951,7768,10466,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	66809992	66844826	chr7:66809992-66844826	7	-	66809992	66809992	16724991	11	1551,50,75,66,90,211,38,66,90,38,151,	0,6160,14005,15303,21203,22277,22992,26742,29547,29904,34683,
#Partially deleted in new
chr7	66815835	66833026	chr7:66815835-66833026	5	-	66815835	66815835	16724991	7	154,62,185,66,90,81,42,	0,317,8162,9460,15360,16564,17149,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	66831852	66844882	chr7:66831852-66844882	5	-	66831852	66831852	16724991	6	628,38,66,90,38,293,	0,1132,4882,7687,8044,12737,
#Partially deleted in new
chr7	66848495	66858136	chr7:66848495-66858136	7	+	66848495	66848495	16724991	4	66,73,99,60,	0,7176,8203,9581,
#Partially deleted in new
chr7	66880707	66882981	chr7:66880707-66882981	7	+	66880707	66880707	16724991	3	186,75,90,	0,1423,2184,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	66891187	66891291	chr7:66891187-66891291	3	+	66891187	66891187	8553170	1	104,	0,
#Deleted in new
chr7	66902856	66906297	chr7:66902856-66906297	3	+	66902856	66902856	8553170	1	3441,	0,
#Partially deleted in new
chr7	66914580	66914943	chr7:66914580-66914943	7	+	66914580	66914580	16724991	1	363,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	66915062	66915334	chr7:66915062-66915334	3	-	66915062	66915062	8553170	1	272,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	66921224	66958551	chr7:66921224-66958551	3	+	66941865	66955522	789624	7	237,177,286,151,184,144,3050,	0,20623,23751,27319,29727,32001,34277,
#Partially deleted in new
chr7	66921231	66945160	chr7:66921231-66945160	0	+	66941865	66945160	789624	4	230,98,177,185,	0,917,20616,23744,
#Partially deleted in new
chr7	66921261	66956153	chr7:66921261-66956153	0	+	66941865	66953241	789624	6	200,177,286,151,144,652,	0,20586,23714,27282,31964,34240,
#Partially deleted in new
chr7	66921843	66945032	chr7:66921843-66945032	0	+	66941865	66945032	789624	3	403,177,57,	0,20004,23132,
#Partially deleted in new
chr7	66930614	66945234	chr7:66930614-66945234	0	+	66941865	66945234	789624	3	100,177,259,	0,11233,14361,
#Partially deleted in new
chr7	66930623	66945098	chr7:66930623-66945098	0	+	66941865	66945098	789624	3	245,177,123,	0,11224,14352,
#Partially deleted in new
chr7	66945057	66951335	chr7:66945057-66951335	0	+	66945057	66945057	8553170	3	204,151,384,	0,3486,5894,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	66980119	66980410	chr7:66980119-66980410	3	+	66980119	66980119	8553170	1	291,	0,
#Partially deleted in new
chr7	66987676	66995601	chr7:66987676-66995601	3	-	66988370	66995417	0	5	823,165,201,130,312,	0,3460,5540,6535,7613,
#Partially deleted in new
chr7	66987743	66995576	chr7:66987743-66995576	0	-	66993406	66995417	789624	5	756,165,201,122,287,	0,3393,5473,6476,7546,
#Partially deleted in new
chr7	66988340	66995587	chr7:66988340-66995587	1	-	66988370	66995417	789624	6	159,165,201,131,4,293,	0,2796,4876,5871,6949,6954,
#Partially deleted in new
chr7	66991060	66995566	chr7:66991060-66995566	0	-	66991060	66991060	8553170	4	241,201,122,277,	0,2156,3159,4229,
#Partially deleted in new
chr7	66991136	66994366	chr7:66991136-66994366	0	-	66991136	66991136	8553170	3	165,201,147,	0,2080,3083,
#Partially deleted in new
chr7	66995172	66998855	chr7:66995172-66998855	0	+	66995172	66995172	8553170	3	325,131,39,	0,2892,3644,
#Partially deleted in new
chr7	66996814	67239514	chr7:66996814-67239514	3	+	66996978	67238529	789624	16	168,131,138,102,195,291,123,118,53,119,110,178,136,111,168,1207,	0,1250,2002,12768,17552,21038,28085,53134,59020,70470,86615,101726,120668,186311,198355,241493,
#Partially deleted in new
chr7	66996819	67017881	chr7:66996819-67017881	0	+	66996978	67017881	789624	5	163,131,138,102,29,	0,1245,1997,12763,21033,
#Partially deleted in new
chr7	66996819	67239519	chr7:66996819-67239519	1	+	66996978	67238529	789624	15	163,131,102,195,291,123,118,50,68,110,178,136,111,168,1212,	0,1245,12763,17547,21033,28080,53129,70465,70516,86610,101721,120663,186306,198350,241488,
#Partially deleted in new
chr7	66996844	67009749	chr7:66996844-67009749	0	+	66996844	66996844	8553170	4	138,131,138,167,	0,1220,1972,12738,
#Partially deleted in new
chr7	66996852	67239512	chr7:66996852-67239512	0	+	66996978	67067337	789624	15	130,131,138,102,195,291,123,118,119,110,178,136,111,168,1205,	0,1212,1964,12730,17514,21000,28047,53096,70432,86577,101688,120630,186273,198317,241455,
#Partially deleted in new
chr7	67067137	67238640	chr7:67067137-67238640	0	+	67067137	67067137	8553170	7	266,110,178,136,111,168,333,	0,16292,31403,50345,115988,128032,171170,
#Deleted in new
chr7	67089256	67089470	chr7:67089256-67089470	7	-	67089256	67089256	16724991	1	214,	0,
#Deleted in new
chr7	67114321	67114397	chr7:67114321-67114397	3	-	67114321	67114321	5263520	1	76,	0,
#Partially deleted in new
chr7	67279777	67286230	chr7:67279777-67286230	7	+	67279777	67279777	16724991	5	259,231,65,86,186,	0,1595,2857,4135,6267,
#Partially deleted in new
chr7	67295607	67302907	chr7:67295607-67302907	7	-	67295607	67295607	16724991	5	196,99,93,139,525,	0,1331,1607,3678,6775,
#Partially deleted in new
chr7	67295617	67302419	chr7:67295617-67302419	4	-	67295617	67295617	16724991	4	184,87,140,44,	0,1599,3667,6758,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	67297652	67297754	chr7:67297652-67297754	3	-	67297652	67297652	8553170	1	102,	0,
#Partially deleted in new
chr7	67302620	67321526	chr7:67302620-67321526	5	+	67302620	67302620	16724991	5	265,97,205,152,1424,	0,3366,6314,6943,17482,
#Partially deleted in new
chr7	67302658	67309715	chr7:67302658-67309715	4	+	67302658	67302658	16724991	4	227,97,563,152,	0,3328,5918,6905,
#Partially deleted in new
chr7	67305986	67309715	chr7:67305986-67309715	5	+	67305986	67305986	16724991	4	97,76,205,152,	0,2590,2948,3577,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	67307604	67308356	chr7:67307604-67308356	7	-	67307604	67307604	16724991	2	194,184,	0,568,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	67333046	67334383	chr7:67333046-67334383	3	+	67333046	67333046	8553170	1	1337,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	67335975	67340024	chr7:67335975-67340024	4	+	67335975	67335975	16724991	3	137,124,228,	0,3474,3821,
#Partially deleted in new
chr7	67627830	67628019	chr7:67627830-67628019	7	+	67627830	67627830	16724991	1	189,	0,
#Partially deleted in new
chr7	67628021	67628349	chr7:67628021-67628349	7	+	67628021	67628021	16724991	1	328,	0,
#Partially deleted in new
chr7	67691057	67697029	chr7:67691057-67697029	3	-	67691057	67691057	8553170	2	468,107,	0,5865,
#Partially deleted in new
chr7	67769628	67770468	chr7:67769628-67770468	7	-	67769628	67769628	16724991	2	159,264,	0,576,
#Partially deleted in new
chr7	68020252	68032690	chr7:68020252-68032690	3	+	68020252	68020252	789624	6	88,49,70,74,129,100,	0,3359,4243,5890,11311,12338,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	68091222	68119209	chr7:68091222-68119209	3	+	68091222	68091222	8553170	2	103,655,	0,27332,
#Partially deleted in new
chr7	68097736	68098250	chr7:68097736-68098250	7	+	68097736	68097736	16724991	2	123,138,	0,376,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	68150282	68288233	chr7:68150282-68288233	3	-	68150282	68150282	8553170	5	41,156,127,138,179,	0,4746,34507,86016,137772,
#Deleted in new
chr7	68241636	68242267	chr7:68241636-68242267	7	+	68241636	68241636	16724991	1	631,	0,
#Deleted in new
chr7	68266318	68266859	chr7:68266318-68266859	7	-	68266318	68266318	16724991	1	541,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	68640797	68641584	chr7:68640797-68641584	7	+	68640797	68640797	16724991	1	787,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	68723910	68724048	chr7:68723910-68724048	7	-	68723910	68723910	16724991	1	138,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	69040151	69046803	chr7:69040151-69046803	3	+	69040151	69040151	8553170	3	114,166,139,	0,716,6513,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	69125269	69125376	chr7:69125269-69125376	3	+	69125269	69125269	8553170	1	107,	0,
#Deleted in new
chr7	69187832	69189318	chr7:69187832-69189318	3	-	69187832	69187832	8553170	3	198,50,191,	0,295,1295,
#Partially deleted in new
chr7	69224695	69430923	chr7:69224695-69430923	3	-	69224695	69224695	8553170	3	112,434,156,	0,47269,206072,
#Partially deleted in new
chr7	69269777	69272006	chr7:69269777-69272006	0	-	69269777	69269777	8553170	2	279,42,	0,2187,
#Partially deleted in new
chr7	69330697	69331378	chr7:69330697-69331378	7	-	69330697	69330697	16724991	1	681,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	69331834	69333633	chr7:69331834-69333633	7	-	69331834	69331834	16724991	1	1799,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	69359081	69430871	chr7:69359081-69430871	1	-	69359081	69359081	8553170	3	381,168,104,	0,29084,71686,
#Partially deleted in new
chr7	69401201	69401303	chr7:69401201-69401303	3	-	69401201	69401201	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	69507509	69507622	chr7:69507509-69507622	3	-	69507509	69507509	8553170	1	113,	0,
#Deleted in new
chr7	69595957	69597448	chr7:69595957-69597448	3	-	69595957	69595957	789624	2	476,215,	0,1276,
#Partially deleted in new
chr7	69598295	70792867	chr7:69598295-70792867	1	+	69599653	70790996	789624	19	1667,213,102,36,30,52,472,251,221,45,96,72,30,72,142,78,84,223,3120,	0,300990,519836,536240,837456,1100273,1164574,1166459,1167818,1169728,1173253,1175732,1177061,1178807,1183319,1186646,1187659,1188913,1191452,
#Partially deleted in new
chr7	69598918	70792503	chr7:69598918-70792503	1	+	69599653	70790996	789624	18	1044,213,102,36,30,52,472,254,221,45,96,30,72,142,78,84,223,2756,	0,300367,519213,535617,836833,1099650,1163951,1165833,1167195,1169105,1172630,1176438,1178184,1182696,1186023,1187036,1188290,1190829,
#Partially deleted in new
chr7	69599332	70793495	chr7:69599332-70793495	3	+	69599653	70790996	789624	19	630,213,102,36,30,52,472,254,221,45,96,72,30,72,142,78,84,223,3748,	0,299953,518799,535203,836419,1099236,1163537,1165419,1166781,1168691,1172216,1174695,1176024,1177770,1182282,1185609,1186622,1187876,1190415,
#Partially deleted in new
chr7	69599610	70294239	chr7:69599610-70294239	1	+	69599653	70290508	789624	5	352,213,102,36,3872,	0,299675,518521,534925,690757,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	69599874	70120370	chr7:69599874-70120370	0	+	69599874	70118284	789624	3	88,213,2239,	0,299411,518257,
#Partially deleted in new
chr7	69643302	70194820	chr7:69643302-70194820	0	+	69643302	69643302	8553170	6	65,99,213,102,36,152,	0,19863,255983,474829,491233,551366,
#Partially deleted in new
chr7	69824570	70290554	chr7:69824570-70290554	1	+	69899477	70290508	789624	6	117,96,213,102,36,187,	0,1209,74715,293561,309965,465797,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	70134555	70437858	chr7:70134555-70437858	0	+	70134555	70134555	8553170	2	16,2107,	0,301196,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	70316915	70437837	chr7:70316915-70437837	0	+	70316915	70316915	8553170	2	131,2086,	0,118836,
#Partially deleted in new
chr7	70596084	70792485	chr7:70596084-70792485	1	+	70764911	70790996	789624	15	715,52,472,251,221,45,96,72,30,72,142,78,84,223,2738,	0,102484,166785,168670,170029,171939,175464,177943,179272,181018,185530,188857,189870,191124,193663,
#Partially deleted in new
chr7	70694057	70791126	chr7:70694057-70791126	1	+	70764911	70790996	789624	14	988,52,472,251,221,96,72,30,72,142,78,84,223,1379,	0,4511,68812,70697,72056,77491,79970,81299,83045,87557,90884,91897,93151,95690,
#Partially deleted in new
chr7	70694786	70781718	chr7:70694786-70781718	0	+	70766310	70781718	789624	9	259,52,221,45,96,72,30,72,104,	0,3782,71327,73237,76762,79241,80570,82316,86828,
#Deleted in new
chr7	70694872	70699490	chr7:70694872-70699490	0	+	70694872	70694872	8553170	2	173,922,	0,3696,
#Partially deleted in new
chr7	70698566	70792487	chr7:70698566-70792487	1	+	70762871	70790996	789624	14	54,472,254,221,45,96,72,30,72,142,78,84,223,2740,	0,64303,66185,67547,69457,72982,75461,76790,78536,83048,86375,87388,88642,91181,
#Partially deleted in new
chr7	70698566	70792487	chr7:70698566-70792487	1	+	70762871	70790996	789624	13	54,472,254,221,45,96,30,72,142,78,84,223,2740,	0,64303,66185,67547,69457,72982,76790,78536,83048,86375,87388,88642,91181,
#Partially deleted in new
chr7	70729138	70764794	chr7:70729138-70764794	0	+	70729138	70729138	8553170	3	83,472,40,	0,33731,35616,
#Partially deleted in new
chr7	70763283	70791357	chr7:70763283-70791357	0	+	70763283	70790996	789624	13	58,254,242,45,96,72,30,72,142,78,84,223,1610,	0,1468,2830,4740,8265,10744,12073,13819,18331,21658,22671,23925,26464,
#Partially deleted in new
chr7	70764930	70774376	chr7:70764930-70774376	0	+	70764930	70764930	8553170	4	75,221,96,349,	0,1183,6618,9097,
#Partially deleted in new
chr7	70766233	70777135	chr7:70766233-70777135	0	+	70766233	70777135	789624	4	122,45,96,33,	0,1790,5315,10869,
#Partially deleted in new
chr7	70766344	70771515	chr7:70766344-70771515	0	+	70766344	70766344	8553170	3	11,45,300,	0,1679,4871,
#Partially deleted in new
chr7	70771446	70786013	chr7:70771446-70786013	0	+	70771446	70771446	8553170	7	198,72,30,72,142,78,59,	0,2581,3910,5656,10168,13495,14508,
#Partially deleted in new
chr7	70774786	70786026	chr7:70774786-70786026	0	+	70774786	70774786	8553170	5	600,72,142,78,72,	0,2316,6828,10155,11168,
#Partially deleted in new
chr7	70775143	70781643	chr7:70775143-70781643	0	+	70775143	70775143	8553170	3	243,72,23,	0,1959,6477,
#Partially deleted in new
chr7	70775356	70786038	chr7:70775356-70786038	0	+	70775356	70777198	789624	5	30,115,142,78,84,	0,1746,6258,9585,10598,
#Partially deleted in new
chr7	70775361	70790109	chr7:70775361-70790109	0	+	70775361	70787111	789624	7	25,72,142,78,84,52,362,	0,1741,6253,9580,10593,11724,14386,
#Partially deleted in new
chr7	70776673	70781659	chr7:70776673-70781659	0	+	70776673	70776673	8553170	2	501,45,	0,4941,
#Deleted in new
chr7	70781469	70784742	chr7:70781469-70784742	0	+	70781469	70781469	8553170	1	3273,	0,
#Deleted in new
chr7	70785408	70789926	chr7:70785408-70789926	0	+	70785408	70785408	8553170	4	64,84,223,179,	0,546,1800,4339,
#Deleted in new
chr7	70786920	70790013	chr7:70786920-70790013	0	+	70786920	70786920	8553170	2	511,266,	0,2827,
#Partially deleted in new
chr7	70837737	70838013	chr7:70837737-70838013	7	+	70837737	70837737	16724991	1	276,	0,
#Partially deleted in new
chr7	71132168	71713599	chr7:71132168-71713599	3	+	71132802	71712146	789624	11	872,184,167,175,198,118,186,138,96,168,1582,	0,203381,256066,283720,288739,439116,533242,537803,545042,578592,579849,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	71283995	71713600	chr7:71283995-71713600	0	+	71283995	71283995	8553170	11	640,184,167,175,198,118,186,138,96,168,1583,	0,51554,104239,131893,136912,287289,381415,385976,393215,426765,428022,
#Partially deleted in new
chr7	71300330	71415931	chr7:71300330-71415931	0	+	71300330	71415931	789624	4	172,184,167,43,	0,35219,87904,115558,
#Partially deleted in new
chr7	71300741	71713598	chr7:71300741-71713598	0	+	71300741	71300741	8553170	11	172,184,167,175,198,118,186,138,96,168,1581,	0,34808,87493,115147,120166,270543,364669,369230,376469,410019,411276,
#Deleted in new
chr7	71307671	71307770	chr7:71307671-71307770	3	-	71307671	71307671	5263520	1	99,	0,
#Deleted in new
chr7	71307673	71307768	chr7:71307673-71307768	3	+	71307673	71307673	5263520	1	95,	0,
#Partially deleted in new
chr7	71335548	71713598	chr7:71335548-71713598	1	+	71335548	71712146	789624	10	185,167,175,198,118,186,138,96,168,1581,	0,52686,80340,85359,235736,329862,334423,341662,375212,376469,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	71685451	71685747	chr7:71685451-71685747	3	-	71685451	71685451	8553170	1	296,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	71779490	72336995	chr7:71779490-72336995	1	-	71787774	72278803	789624	6	8412,157,113,144,125,292,	0,30845,244166,326660,499195,557213,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	71779490	72412373	chr7:71779490-72412373	1	-	71787774	72403369	789624	7	8412,157,113,144,125,192,316,	0,30845,244166,326660,499195,623760,632567,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	71779490	72447061	chr7:71779490-72447061	3	-	71787774	72278803	789624	7	8412,157,113,144,125,218,20,	0,30845,244166,326660,499195,632567,667551,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	71779491	71810495	chr7:71779491-71810495	1	-	71787774	71810495	789624	2	8411,160,	0,30844,
#Partially deleted in new
chr7	71787774	72447151	chr7:71787774-72447151	1	-	71787774	72278803	789624	6	128,157,113,144,125,110,	0,22561,235882,318376,490911,659267,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	71913737	71913856	chr7:71913737-71913856	7	-	71913737	71913737	16724991	1	119,	0,
#Deleted in new
chr7	71942258	71942468	chr7:71942258-71942468	7	+	71942258	71942258	16724991	1	210,	0,
#Partially deleted in new
chr7	72023656	72337751	chr7:72023656-72337751	0	-	72023656	72278803	789624	4	113,144,125,168,	0,82494,255029,313927,
#Deleted in new
chr7	72103180	72104209	chr7:72103180-72104209	7	+	72103180	72103180	16724991	2	161,135,	0,894,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	72558743	72828174	chr7:72558743-72828174	1	-	72558771	72828075	789624	12	145,168,111,136,178,110,118,118,123,102,131,103,	0,57928,70143,135943,154877,170078,185740,218672,243656,256636,268111,269328,
#Partially deleted in new
chr7	72574514	72828198	chr7:72574514-72828198	3	-	72575497	72828075	789624	14	1205,168,111,136,178,110,118,118,123,291,195,102,131,127,	0,42157,54372,120172,139106,154307,169969,202901,227885,232551,235956,240865,252340,253557,
#Deleted in new
chr7	72697902	72697978	chr7:72697902-72697978	3	+	72697902	72697902	5263520	1	76,	0,
#Deleted in new
chr7	72722884	72723089	chr7:72722884-72723089	7	+	72722884	72722884	16724991	1	205,	0,
#Partially deleted in new
chr7	72728843	72828186	chr7:72728843-72828186	0	-	72728843	72828075	789624	8	88,118,118,123,291,102,131,115,	0,15640,48572,73556,78222,86536,98011,99228,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	72768797	72769191	chr7:72768797-72769191	7	+	72768797	72768797	16724991	1	394,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	72822893	72823171	chr7:72822893-72823171	3	-	72822893	72822893	8553170	1	278,	0,
#Partially deleted in new
chr7	72829424	72836638	chr7:72829424-72836638	7	+	72829424	72829424	16724991	3	359,197,62,	0,2177,7152,
#Partially deleted in new
chr7	72829489	72834005	chr7:72829489-72834005	4	+	72829489	72829489	16724991	3	294,197,242,	0,2112,4274,
#Partially deleted in new
chr7	72829500	72836579	chr7:72829500-72836579	4	+	72829500	72829500	16724991	5	476,122,197,165,3,	0,1191,2101,4263,7076,
#Partially deleted in new
chr7	72829506	72834006	chr7:72829506-72834006	4	+	72829506	72829506	16724991	4	277,122,197,243,	0,1185,2095,4257,
#Partially deleted in new
chr7	72829655	72836701	chr7:72829655-72836701	5	+	72829655	72829655	16724991	5	128,122,197,165,125,	0,1036,1946,4108,6921,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	72841436	72841727	chr7:72841436-72841727	3	-	72841436	72841436	8553170	1	291,	0,
#Partially deleted in new
chr7	72862756	72869091	chr7:72862756-72869091	5	-	72862756	72862756	16724991	6	248,105,244,86,59,322,	0,1101,1328,3614,4922,6013,
#Partially deleted in new
chr7	72863902	72870510	chr7:72863902-72870510	7	-	72863902	72863902	16724991	6	60,244,86,59,231,198,	0,182,2468,3776,4867,6410,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	72879364	72951440	chr7:72879364-72951440	1	+	72926412	72948470	0	16	521,127,178,64,216,162,81,172,92,74,122,103,177,1686,123,3113,	0,11262,11568,34400,46897,47437,49020,50575,59225,59971,60482,61049,61452,62472,66221,68963,
#Partially deleted in new
chr7	72890626	72948470	chr7:72890626-72948470	1	+	72926412	72948470	0	14	127,178,216,162,81,172,92,74,122,103,177,1686,123,143,	0,306,35635,36175,37758,39313,47963,48709,49220,49787,50190,51210,54959,57701,
#Partially deleted in new
chr7	72890626	72948303	chr7:72890626-72948303	3	+	72926412	72946234	0	14	127,178,216,162,81,172,92,74,122,103,177,1686,123,2167,	0,306,35635,36175,37758,39313,47963,48709,49220,49787,50190,51210,54959,55510,
#Partially deleted in new
chr7	72890961	72948299	chr7:72890961-72948299	1	+	72926412	72946234	0	13	149,216,162,81,172,92,74,122,103,177,1686,123,2163,	0,35300,35840,37423,38978,47628,48374,48885,49452,49855,50875,54624,55175,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	72924417	72925125	chr7:72924417-72925125	3	-	72924417	72924417	8553170	1	708,	0,
#Partially deleted in new
chr7	72925121	72946234	chr7:72925121-72946234	1	+	72925121	72946234	0	13	644,216,162,81,172,92,74,122,103,177,1686,123,98,	0,1140,1680,3263,4818,13468,14214,14725,15292,15695,16715,20464,21015,
#Partially deleted in new
chr7	72947580	72954706	chr7:72947580-72954706	7	-	72947580	72947580	16724991	5	1228,211,116,139,82,	0,1311,2265,2477,7044,
#Partially deleted in new
chr7	72948292	72954713	chr7:72948292-72954713	4	-	72948292	72948292	16724991	7	305,141,211,179,116,139,89,	0,375,599,1020,1553,1765,6332,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	72948297	72954790	chr7:72948297-72954790	5	-	72948297	72948297	16724991	11	300,141,211,179,116,139,144,105,167,121,166,	0,370,594,1015,1548,1760,3854,5028,5213,6061,6327,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	72948297	72954720	chr7:72948297-72954720	4	-	72948297	72948297	16724991	12	300,141,89,50,179,116,139,144,105,167,121,96,	0,370,594,755,1015,1548,1760,3854,5028,5213,6061,6327,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	72948484	72954717	chr7:72948484-72954717	5	-	72948484	72948484	16724991	11	113,141,211,179,116,139,144,105,167,121,93,	0,183,407,828,1361,1573,3667,4841,5026,5874,6140,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	72954796	72957106	chr7:72954796-72957106	3	+	72954796	72954796	8553170	2	106,1979,	0,331,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	72959484	72969466	chr7:72959484-72969466	3	-	72959881	72966157	789624	5	424,231,96,417,182,	0,536,1865,6274,9800,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	72959484	72966953	chr7:72959484-72966953	1	-	72959881	72966157	789624	5	421,231,96,417,121,	0,536,1865,6274,7348,
#Partially deleted in new
chr7	72969695	73005721	chr7:72969695-73005721	7	-	72969695	72969695	16724991	8	424,74,80,99,124,117,86,29,	0,10248,29775,30065,30662,33325,33949,35997,
#Partially deleted in new
chr7	72969813	72971727	chr7:72969813-72971727	7	+	72969813	72969813	16724991	4	57,118,90,203,	0,143,922,1711,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	72983359	72983461	chr7:72983359-72983461	3	-	72983359	72983359	8553170	1	102,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	72997058	73005918	chr7:72997058-73005918	4	-	72997058	72997058	16724991	8	1306,115,108,80,99,117,86,226,	0,1617,1996,2412,2702,5962,6586,8634,
#Partially deleted in new
chr7	72998026	73003730	chr7:72998026-73003730	5	-	72998026	72998026	16724991	8	338,115,108,80,99,124,117,86,	0,649,1028,1444,1734,2331,4994,5618,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	72998483	73005915	chr7:72998483-73005915	4	-	72998483	72998483	16724991	6	1067,99,124,117,86,223,	0,1277,1874,4537,5161,7209,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	72998489	73005922	chr7:72998489-73005922	5	-	72998489	72998489	16724991	8	301,108,80,99,124,117,86,347,	0,565,981,1271,1868,4531,5155,7086,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	72998492	73005785	chr7:72998492-73005785	4	-	72998492	72998492	16724991	7	298,80,99,124,117,86,93,	0,978,1268,1865,4528,5152,7200,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	73005540	73021103	chr7:73005540-73021103	7	+	73005540	73005540	16724991	7	634,140,87,103,186,89,97,	0,3903,5928,6191,7551,10788,15466,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	73011143	73011245	chr7:73011143-73011245	3	+	73011143	73011143	8553170	1	102,	0,
#Partially deleted in new
chr7	73020337	73029766	chr7:73020337-73029766	7	-	73020337	73020337	16724991	8	863,105,244,86,59,219,583,122,	0,1716,1943,3892,5205,6297,7499,9307,
#Partially deleted in new
chr7	73022098	73026853	chr7:73022098-73026853	5	-	73022098	73022098	16724991	5	60,244,86,59,219,	0,182,2131,3444,4536,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	73037370	73049246	chr7:73037370-73049246	7	+	73037370	73037370	16724991	6	155,87,103,184,89,97,	0,2045,2308,3867,7101,11779,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	73039084	73039186	chr7:73039084-73039186	3	+	73039084	73039084	8553170	1	102,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	73039695	73069506	chr7:73039695-73069506	3	+	73039695	73039695	8553170	7	86,184,89,140,87,113,159,	0,1542,4776,25835,27866,28119,29652,
#Partially deleted in new
chr7	73048054	73053981	chr7:73048054-73053981	5	-	73048054	73048054	16724991	5	1289,105,244,86,300,	0,2142,2369,4314,5627,
#Partially deleted in new
chr7	73048480	73057911	chr7:73048480-73057911	5	-	73048480	73048480	16724991	8	863,105,244,86,59,219,583,122,	0,1716,1943,3888,5201,6293,7501,9309,
#Partially deleted in new
chr7	73050241	73055028	chr7:73050241-73055028	7	-	73050241	73050241	16724991	5	60,244,86,59,255,	0,182,2127,3440,4532,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	73065528	73077353	chr7:73065528-73077353	7	+	73065528	73065528	16724991	6	142,87,103,184,89,94,	0,2033,2296,3819,7053,11731,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	73067230	73067332	chr7:73067230-73067332	3	+	73067230	73067230	8553170	1	102,	0,
#Partially deleted in new
chr7	73076164	73082095	chr7:73076164-73082095	5	-	73076164	73076164	16724991	5	1289,105,244,86,300,	0,2142,2369,4318,5631,
#Partially deleted in new
chr7	73076590	73086038	chr7:73076590-73086038	7	-	73076590	73076590	16724991	8	863,105,244,86,59,219,583,122,	0,1716,1943,3892,5205,6297,7518,9326,
#Partially deleted in new
chr7	73078351	73084132	chr7:73078351-73084132	5	-	73078351	73078351	16724991	6	60,244,86,59,219,24,	0,182,2131,3444,4536,5757,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	73093656	73105389	chr7:73093656-73105389	7	+	73093656	73093656	16724991	6	140,87,113,184,89,97,	0,2025,2278,3727,6961,11636,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	73095356	73095458	chr7:73095356-73095458	3	+	73095356	73095356	8553170	1	102,	0,
#Partially deleted in new
chr7	73104200	73110129	chr7:73104200-73110129	5	-	73104200	73104200	16724991	5	1286,105,244,86,300,	0,2139,2366,4316,5629,
#Partially deleted in new
chr7	73106384	73111140	chr7:73106384-73111140	7	-	73106384	73106384	16724991	5	60,244,86,59,219,	0,182,2132,3445,4537,
#Partially deleted in new
chr7	73154937	73207283	chr7:73154937-73207283	7	+	73154937	73154937	16724991	24	406,111,66,184,59,72,184,59,72,184,59,75,102,66,184,56,81,84,184,29,42,42,76,1132,	0,20477,21919,24149,25601,27139,28177,29723,35128,36433,37559,38013,39688,40698,40941,43026,43755,44758,45511,47174,48485,49625,50445,51214,
#Partially deleted in new
chr7	73175414	73205441	chr7:73175414-73205441	5	+	73175414	73175414	16724991	22	111,66,184,59,72,184,59,72,184,59,75,102,66,184,56,81,84,184,29,42,42,59,	0,1442,3672,5124,6662,7700,9246,14651,15956,17082,17536,19211,20221,20464,22549,23278,24281,25034,26697,28008,29148,29968,
#Deleted in new
chr7	73187968	73188736	chr7:73187968-73188736	7	-	73187968	73187968	16724991	1	768,	0,
#Partially deleted in new
chr7	73220623	73230025	chr7:73220623-73230025	7	+	73220623	73220623	16724991	6	94,79,76,166,56,459,	0,3254,5087,5262,6785,8943,
#Partially deleted in new
chr7	73220638	73235945	chr7:73220638-73235945	5	+	73220638	73220638	16724991	8	79,79,56,694,80,105,146,277,	0,3239,6770,8928,11172,13975,14550,15030,
#Partially deleted in new
chr7	73220645	73235787	chr7:73220645-73235787	5	+	73220645	73220645	16724991	11	75,78,75,174,69,111,126,120,129,171,126,	0,3233,5065,5233,6764,8935,9497,11164,13945,14523,15016,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	73242750	73266840	chr7:73242750-73266840	5	-	73242750	73242750	16724991	10	2121,29,184,84,78,66,57,78,44,314,	0,5826,7139,8622,10777,12948,14732,16570,23361,23776,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	73242868	73271614	chr7:73242868-73271614	4	-	73242868	73242868	16724991	13	2003,29,184,84,78,66,57,78,44,55,29,184,120,	0,5708,7021,8504,10659,12830,14614,16452,23243,23658,26110,26307,28626,
#Partially deleted in new
chr7	73293496	73301161	chr7:73293496-73301161	7	+	73293496	73293496	16724991	8	93,75,123,102,177,1695,126,96,	0,743,1257,1825,2227,3248,7018,7569,
#Partially deleted in new
chr7	73302516	73308804	chr7:73302516-73308804	1	-	73303595	73308790	0	9	1224,211,179,116,139,109,61,123,107,	0,1309,1713,2230,2442,4877,5066,5914,6181,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	73303224	73308816	chr7:73303224-73308816	0	-	73303224	73303224	8553170	9	305,141,211,175,116,139,109,971,119,	0,375,601,1005,1522,1734,4169,4358,5473,
#Partially deleted in new
chr7	73303229	73308806	chr7:73303229-73308806	1	-	73303595	73308790	0	9	511,211,179,116,139,109,175,123,109,	0,596,1000,1517,1729,4164,4353,5201,5468,
#Partially deleted in new
chr7	73303229	73308867	chr7:73303229-73308867	3	-	73303414	73308790	0	10	300,141,211,179,116,139,109,175,123,170,	0,370,596,1000,1517,1729,4164,4353,5201,5468,
#Partially deleted in new
chr7	73303234	73308816	chr7:73303234-73308816	1	-	73303397	73308790	0	10	290,141,211,179,116,139,109,175,123,119,	0,365,591,995,1512,1724,4159,4348,5196,5463,
#Deleted in new
chr7	73303930	73304703	chr7:73303930-73304703	0	-	73303930	73303930	8553170	2	106,474,	0,299,
#Partially deleted in new
chr7	73304315	73308553	chr7:73304315-73308553	0	-	73305044	73308553	789624	4	93,116,139,123,	0,431,643,4115,
#Partially deleted in new
chr7	73312538	73328082	chr7:73312538-73328082	3	-	73312920	73324787	789624	7	972,125,23,231,96,417,183,	0,4026,6148,6283,7608,11850,15361,
#Partially deleted in new
chr7	73312910	73325571	chr7:73312910-73325571	1	-	73312920	73324787	789624	7	600,125,23,231,96,417,107,	0,3654,5776,5911,7236,11478,12554,
#Partially deleted in new
chr7	73313340	73316942	chr7:73313340-73316942	0	-	73313340	73313340	8553170	2	170,378,	0,3224,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	73314106	73315213	chr7:73314106-73315213	7	+	73314106	73314106	16724991	1	1107,	0,
#Partially deleted in new
chr7	73321898	73327954	chr7:73321898-73327954	0	-	73321898	73321898	8553170	3	83,417,55,	0,2490,6001,
#Partially deleted in new
chr7	73328163	73358546	chr7:73328163-73358546	1	+	73328272	73342897	0	9	151,118,90,203,120,195,110,93,366,	0,411,1196,1986,3493,12474,13109,14643,30017,
#Partially deleted in new
chr7	73328252	73341382	chr7:73328252-73341382	0	+	73328272	73341382	789624	6	62,118,90,203,195,110,	0,322,1107,1897,12385,13020,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	73328252	73353357	chr7:73328252-73353357	0	+	73328272	73341288	8553170	9	62,118,90,203,120,195,127,93,2257,	0,322,1107,1897,3404,12385,13003,14554,22848,
#Partially deleted in new
chr7	73328274	73358637	chr7:73328274-73358637	1	+	73328428	73342897	0	8	211,118,203,120,195,110,93,457,	0,300,1875,3382,12363,12998,14532,29906,
#Partially deleted in new
chr7	73328311	73358625	chr7:73328311-73358625	0	+	73328428	73329490	789624	9	174,118,475,203,120,195,110,93,445,	0,263,1048,1838,3345,12326,12961,14495,29869,
#Partially deleted in new
chr7	73328332	73341297	chr7:73328332-73341297	0	+	73328428	73336785	789624	8	153,118,90,203,105,287,195,25,	0,242,1027,1817,3324,8426,12305,12940,
#Partially deleted in new
chr7	73328345	73329589	chr7:73328345-73329589	0	+	73328345	73328345	8553170	2	347,230,	0,1014,
#Partially deleted in new
chr7	73328359	73358625	chr7:73328359-73358625	3	+	73328428	73342897	0	9	126,118,90,203,120,195,110,93,445,	0,215,1000,1790,3297,12278,12913,14447,29821,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	73339093	73339200	chr7:73339093-73339200	3	-	73339093	73339093	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	73403787	73403889	chr7:73403787-73403889	3	-	73403787	73403787	8553170	1	102,	0,
#Deleted in new
chr7	73433782	73436120	chr7:73433782-73436120	3	+	73434007	73435783	789624	1	2338,	0,
#Partially deleted in new
chr7	73440397	73522272	chr7:73440397-73522272	3	-	73442195	73521933	0	20	1296,373,104,146,116,148,148,183,178,99,106,134,139,1702,198,122,202,145,117,446,	0,1783,2327,3586,6866,9144,10449,19138,22524,25041,25898,29119,29947,36470,48796,52402,58099,67929,70338,81429,
#Partially deleted in new
chr7	73441564	73522278	chr7:73441564-73522278	1	-	73442195	73521933	0	19	989,104,146,116,148,148,183,178,99,106,134,139,1702,198,122,202,145,117,452,	0,1160,2419,5699,7977,9282,17971,21357,23874,24731,27952,28780,35303,47629,51235,56932,66762,69171,80262,
#Partially deleted in new
chr7	73462463	73466387	chr7:73462463-73466387	0	-	73462463	73462463	8553170	3	636,99,92,	0,2975,3832,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	73507207	73507274	chr7:73507207-73507274	3	+	73507207	73507207	8553170	1	67,	0,
#Partially deleted in new
chr7	73536355	73558002	chr7:73536355-73558002	3	-	73537297	73557578	789624	6	1035,80,171,97,76,516,	0,1578,3526,7192,15811,21131,
#Partially deleted in new
chr7	73536355	73539945	chr7:73536355-73539945	0	-	73536355	73536355	8553170	3	1035,305,64,	0,1578,3526,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	73536355	73540568	chr7:73536355-73540568	0	-	73536355	73536355	8553170	3	1035,80,687,	0,1578,3526,
#Partially deleted in new
chr7	73536370	73557671	chr7:73536370-73557671	1	-	73537297	73557578	789624	5	1020,80,97,76,185,	0,1563,7177,15796,21116,
#Partially deleted in new
chr7	73536387	73557251	chr7:73536387-73557251	0	-	73536387	73536387	789624	6	1003,80,171,97,76,211,	0,1546,3494,7160,15779,20653,
#Partially deleted in new
chr7	73536953	73557609	chr7:73536953-73557609	0	-	73539953	73557578	789624	5	437,80,171,76,123,	0,980,2928,15213,20533,
#Partially deleted in new
chr7	73537100	73557211	chr7:73537100-73557211	0	-	73537100	73537100	8553170	5	290,80,97,76,171,	0,833,6447,15066,19940,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	73537115	73557654	chr7:73537115-73557654	0	-	73542838	73557578	789624	6	275,80,171,78,76,168,	0,818,2766,5714,15051,20371,
#Partially deleted in new
chr7	73537158	73543601	chr7:73537158-73543601	0	-	73537158	73537158	8553170	3	232,171,54,	0,2723,6389,
#Partially deleted in new
chr7	73537265	73557241	chr7:73537265-73557241	0	-	73537265	73537265	8553170	5	125,80,171,76,201,	0,668,2616,14901,19775,
#Partially deleted in new
chr7	73537323	73557687	chr7:73537323-73557687	0	-	73537323	73537323	8553170	4	67,80,171,201,	0,610,2558,20163,
#Partially deleted in new
chr7	73539715	73557112	chr7:73539715-73557112	0	-	73539715	73539715	8553170	4	337,97,76,72,	0,3832,12451,17325,
#Partially deleted in new
chr7	73539883	73543893	chr7:73539883-73543893	0	-	73539883	73539883	8553170	2	169,346,	0,3664,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	73567532	73578791	chr7:73567532-73578791	3	-	73570506	73578549	789624	7	3440,153,127,152,185,131,372,	0,3656,5311,5787,6405,6850,10887,
#Partially deleted in new
chr7	73569659	73578576	chr7:73569659-73578576	0	-	73574560	73578549	789624	7	1313,153,127,152,185,189,157,	0,1529,3184,3660,4278,4723,8760,
#Partially deleted in new
chr7	73569659	73578590	chr7:73569659-73578590	0	-	73573363	73578549	789624	7	1313,153,127,152,162,131,171,	0,1529,3184,3660,4301,4723,8760,
#Partially deleted in new
chr7	73569659	73578269	chr7:73569659-73578269	0	-	73569659	73569659	8553170	7	1313,153,127,152,185,131,297,	0,1529,3184,3660,4278,4723,8313,
#Partially deleted in new
chr7	73569664	73578560	chr7:73569664-73578560	1	-	73570477	73578549	789624	8	848,428,153,127,152,185,131,141,	0,880,1524,3179,3655,4273,4718,8755,
#Partially deleted in new
chr7	73570007	73578554	chr7:73570007-73578554	0	-	73574120	73578549	789624	6	965,153,127,152,185,135,	0,1181,2836,3312,3930,8412,
#Partially deleted in new
chr7	73570194	73578336	chr7:73570194-73578336	1	-	73570506	73578311	789624	7	778,153,127,152,185,131,47,	0,994,2649,3125,3743,4188,8095,
#Partially deleted in new
chr7	73570410	73578599	chr7:73570410-73578599	0	-	73573992	73578549	789624	7	562,153,127,152,118,131,180,	0,778,2433,2909,3527,3972,8009,
#Deleted in new
chr7	73570470	73571394	chr7:73570470-73571394	0	-	73570470	73570470	8553170	2	502,206,	0,718,
#Partially deleted in new
chr7	73570885	73578619	chr7:73570885-73578619	0	-	73576603	73578549	789624	8	87,153,127,152,185,131,161,200,	0,303,1958,2434,3052,3497,5655,7534,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	73571583	73578634	chr7:73571583-73578634	0	-	73571583	73571583	8553170	6	452,127,152,185,131,215,	0,1260,1736,2354,2799,6836,
#Partially deleted in new
chr7	73572847	73578371	chr7:73572847-73578371	0	-	73576603	73578311	789624	6	123,152,185,131,161,82,	0,472,1090,1535,3693,5442,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	73572877	73578676	chr7:73572877-73578676	0	-	73574769	73578549	789624	5	93,152,185,422,257,	0,442,1060,1505,5542,
#Partially deleted in new
chr7	73573320	73578354	chr7:73573320-73578354	0	-	73574384	73578311	789624	4	151,185,131,109,	0,617,1062,4925,
#Partially deleted in new
chr7	73573340	73578419	chr7:73573340-73578419	0	-	73573340	73573340	8553170	4	131,162,131,135,	0,620,1042,4944,
#Partially deleted in new
chr7	73573342	73578791	chr7:73573342-73578791	0	-	73573342	73574098	789624	4	129,185,131,49,	0,595,1040,5400,
#Partially deleted in new
chr7	73573400	73578347	chr7:73573400-73578347	0	-	73573400	73573400	8553170	4	71,185,131,375,	0,537,982,4572,
#Partially deleted in new
chr7	73573831	73578576	chr7:73573831-73578576	0	-	73573831	73573831	8553170	3	291,131,157,	0,551,4588,
#Partially deleted in new
chr7	73573878	73576748	chr7:73573878-73576748	0	-	73573878	73573878	8553170	3	244,131,208,	0,504,2662,
#Partially deleted in new
chr7	73574444	73578317	chr7:73574444-73578317	0	-	73574444	73574444	8553170	3	69,161,345,	0,2096,3528,
#Partially deleted in new
chr7	73574476	73578599	chr7:73574476-73578599	0	-	73578265	73578549	789624	4	37,161,295,180,	0,2064,3496,3943,
#Partially deleted in new
chr7	73593193	73624540	chr7:73593193-73624540	3	-	73593864	73624492	789624	17	790,130,124,128,120,116,151,68,532,170,81,202,45,90,83,107,341,	0,1080,2443,2648,2959,3170,3445,3671,3988,6332,12494,12716,13780,14137,14396,22877,31006,
#Partially deleted in new
chr7	73593193	73624492	chr7:73593193-73624492	0	-	73596422	73624492	789624	16	790,130,124,128,120,116,68,532,170,81,202,45,90,83,107,293,	0,1080,2443,2648,2959,3170,3671,3988,6332,12494,12716,13780,14137,14396,22877,31006,
#Partially deleted in new
chr7	73593193	73624540	chr7:73593193-73624540	1	-	73593864	73624492	789624	17	790,130,124,71,114,116,151,68,532,170,81,202,45,90,83,107,341,	0,1080,2443,2648,2959,3170,3445,3671,3988,6332,12494,12716,13780,14137,14396,22877,31006,
#Partially deleted in new
chr7	73593193	73624492	chr7:73593193-73624492	1	-	73593864	73624492	789624	17	790,130,124,128,114,116,151,68,532,170,81,202,45,90,83,107,293,	0,1080,2443,2648,2959,3170,3445,3671,3988,6332,12494,12716,13780,14137,14396,22877,31006,
#Partially deleted in new
chr7	73593193	73624492	chr7:73593193-73624492	1	-	73593864	73624492	789624	17	790,130,124,71,120,116,151,68,532,170,81,202,45,90,83,107,293,	0,1080,2443,2648,2959,3170,3445,3671,3988,6332,12494,12716,13780,14137,14396,22877,31006,
#Partially deleted in new
chr7	73593201	73624514	chr7:73593201-73624514	1	-	73594265	73624492	789624	15	1202,124,128,120,116,148,68,532,170,81,16,42,83,107,315,	0,2435,2640,2951,3162,3437,3663,3980,6324,12486,12708,14177,14388,22869,30998,
#Deleted in new
chr7	73596173	73597362	chr7:73596173-73597362	0	-	73596173	73596173	8553170	4	99,426,68,181,	0,190,691,1008,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	73596709	73606824	chr7:73596709-73606824	0	-	73596709	73596709	8553170	5	223,532,170,81,915,	0,472,2816,8978,9200,
#Partially deleted in new
chr7	73597644	73624543	chr7:73597644-73624543	0	-	73597644	73624492	789624	4	69,170,107,344,	0,1881,18426,26555,
#Partially deleted in new
chr7	73599591	73607120	chr7:73599591-73607120	0	-	73599591	73599591	8553170	4	104,81,202,147,	0,6096,6318,7382,
#Partially deleted in new
chr7	73605909	73616161	chr7:73605909-73616161	0	-	73605909	73616161	789624	5	202,45,285,83,91,	0,1064,1226,1680,10161,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	73609261	73611502	chr7:73609261-73611502	3	-	73609261	73609261	8553170	1	2241,	0,
#Partially deleted in new
chr7	73667824	73672110	chr7:73667824-73672110	3	+	73667958	73671376	789624	4	272,172,83,1097,	0,1594,2195,3189,
#Partially deleted in new
chr7	73667892	73672112	chr7:73667892-73672112	1	+	73667958	73671376	789624	2	204,1099,	0,3121,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	73680968	73683453	chr7:73680968-73683453	3	-	73682742	73683423	0	1	2485,	0,
#Partially deleted in new
chr7	73683024	73686734	chr7:73683024-73686734	0	+	73683024	73683024	8553170	2	359,99,	0,3611,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	73683567	73698212	chr7:73683567-73698212	3	+	73683625	73697886	0	12	106,38,96,83,97,97,51,86,46,59,90,381,	0,199,3068,3250,3431,7348,9028,9761,10056,10424,14037,14264,
#Partially deleted in new
chr7	73683568	73687095	chr7:73683568-73687095	0	+	73686642	73687095	789624	5	105,157,96,83,97,	0,198,3067,3249,3430,
#Partially deleted in new
chr7	73683570	73694465	chr7:73683570-73694465	0	+	73683625	73693338	789624	9	103,38,96,83,97,51,86,46,474,	0,196,3065,3247,7345,9025,9758,10053,10421,
#Partially deleted in new
chr7	73683572	73696740	chr7:73683572-73696740	0	+	73683625	73692633	789624	9	101,38,96,83,51,86,46,59,335,	0,194,3063,3245,9023,9756,10051,10419,12833,
#Partially deleted in new
chr7	73683596	73692873	chr7:73683596-73692873	0	+	73683596	73683596	8553170	5	77,38,96,83,278,	0,170,3039,3221,8999,
#Partially deleted in new
chr7	73683596	73694101	chr7:73683596-73694101	0	+	73683596	73683596	8553170	7	77,38,97,51,86,46,110,	0,170,7319,8999,9732,10027,10395,
#Partially deleted in new
chr7	73683600	73692646	chr7:73683600-73692646	0	+	73683653	73692646	789624	7	73,135,96,83,97,97,51,	0,166,3035,3217,3398,7315,8995,
#Partially deleted in new
chr7	73683606	73694004	chr7:73683606-73694004	0	+	73683625	73693338	789624	9	67,38,96,83,97,51,86,46,13,	0,160,3029,3211,3392,8989,9722,10017,10385,
#Partially deleted in new
chr7	73683606	73705161	chr7:73683606-73705161	0	+	73683653	73692633	789624	10	67,135,96,83,51,86,46,59,90,1783,	0,160,3029,3211,8989,9722,10017,10385,13998,19772,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	73683608	73698156	chr7:73683608-73698156	0	+	73683608	73683608	8553170	11	65,38,96,83,97,97,819,46,59,90,325,	0,158,3027,3209,3390,7307,8987,10015,10383,13996,14223,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	73683625	73698208	chr7:73683625-73698208	1	+	73683625	73697886	0	13	48,38,96,83,97,97,51,86,46,59,51,90,377,	0,141,3010,3192,3373,7290,8970,9703,9998,10366,13840,13979,14206,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	73683625	73698104	chr7:73683625-73698104	0	+	73683653	73683950	789624	12	48,234,96,83,97,97,51,86,46,59,90,273,	0,141,3010,3192,3373,7290,8970,9703,9998,10366,13979,14206,
#Partially deleted in new
chr7	73683630	73693551	chr7:73683630-73693551	0	+	73683630	73683630	8553170	7	43,38,96,83,97,51,223,	0,136,3005,3187,3368,8965,9698,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	73686819	73698156	chr7:73686819-73698156	0	+	73686819	73692633	789624	7	81,51,86,46,59,90,325,	0,5776,6509,6804,7172,10785,11012,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	73690915	73698152	chr7:73690915-73698152	0	+	73690915	73697846	789624	6	97,51,86,46,90,321,	0,1680,2413,2708,6689,6916,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	73692595	73698142	chr7:73692595-73698142	0	+	73692595	73697886	789624	3	51,90,311,	0,5009,5236,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	73694113	73698136	chr7:73694113-73698136	0	+	73694113	73694113	8553170	2	3581,305,	0,3718,
#Partially deleted in new
chr7	73699205	73719658	chr7:73699205-73719658	3	-	73700406	73719631	789624	10	1279,111,138,74,109,74,75,100,78,57,	0,1524,3639,4549,4942,5144,5944,9383,9839,20396,
#Partially deleted in new
chr7	73699205	73719659	chr7:73699205-73719659	1	-	73700471	73719631	789624	10	1279,65,138,74,109,74,75,100,78,58,	0,1524,3639,4549,4942,5144,5944,9383,9839,20396,
#Deleted in new
chr7	73699758	73700931	chr7:73699758-73700931	0	-	73699758	73699758	8553170	2	726,202,	0,971,
#Partially deleted in new
chr7	73700286	73704259	chr7:73700286-73704259	0	-	73700286	73700286	8553170	5	198,202,138,74,112,	0,443,2558,3468,3861,
#Deleted in new
chr7	73700315	73701210	chr7:73700315-73701210	0	-	73700315	73700315	8553170	2	169,481,	0,414,
#Partially deleted in new
chr7	73700728	73719657	chr7:73700728-73719657	1	-	73700881	73719631	789624	9	203,253,74,109,74,75,100,78,56,	0,2001,3026,3419,3621,4421,7860,8316,18873,
#Partially deleted in new
chr7	73700776	73704055	chr7:73700776-73704055	0	-	73700776	73700776	8553170	3	64,138,301,	0,2068,2978,
#Partially deleted in new
chr7	73700782	73704496	chr7:73700782-73704496	0	-	73700782	73700782	8553170	4	149,138,74,349,	0,2062,2972,3365,
#Partially deleted in new
chr7	73700804	73705880	chr7:73700804-73705880	0	-	73700804	73700804	8553170	7	127,138,74,109,74,75,117,	0,2040,2950,3343,3545,4345,4959,
#Partially deleted in new
chr7	73700826	73719631	chr7:73700826-73719631	1	-	73700826	73719631	789624	9	105,138,74,109,74,75,100,78,30,	0,2018,2928,3321,3523,4323,7762,8218,18775,
#Deleted in new
chr7	73702536	73704191	chr7:73702536-73704191	0	-	73702536	73702536	8553170	3	446,74,44,	0,1218,1611,
#Partially deleted in new
chr7	73702844	73719626	chr7:73702844-73719626	0	-	73702844	73702844	8553170	9	138,74,109,74,75,100,78,154,25,	0,910,1303,1505,2305,5744,6200,13736,16757,
#Deleted in new
chr7	73703762	73705465	chr7:73703762-73705465	0	-	73703762	73703762	8553170	4	66,109,74,316,	0,385,587,1387,
#Partially deleted in new
chr7	73704179	73719672	chr7:73704179-73719672	0	-	73704179	73704179	8553170	5	244,75,100,78,71,	0,970,4409,4865,15422,
#Deleted in new
chr7	73711316	73711397	chr7:73711316-73711397	3	+	73711316	73711316	5263520	1	81,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	73732568	73732868	chr7:73732568-73732868	3	-	73732568	73732568	8553170	1	300,	0,
#Partially deleted in new
chr7	73735037	73736158	chr7:73735037-73736158	5	+	73735037	73735037	16724991	4	53,259,121,229,	0,203,690,892,
#Partially deleted in new
chr7	73735406	73736073	chr7:73735406-73736073	7	+	73735406	73735406	16724991	3	93,121,144,	0,321,523,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	73736093	73738867	chr7:73736093-73738867	3	-	73736558	73738797	789624	6	598,182,171,174,136,222,	0,835,1127,1468,2234,2552,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	73736093	73738852	chr7:73736093-73738852	0	-	73737712	73738797	789624	6	598,182,171,174,131,207,	0,835,1127,1468,2239,2552,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	73736093	73738852	chr7:73736093-73738852	1	-	73736558	73738797	789624	6	598,182,171,174,115,207,	0,835,1127,1468,2234,2552,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	73736093	73738781	chr7:73736093-73738781	0	-	73736093	73736093	8553170	5	598,182,515,131,136,	0,835,1127,2239,2552,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	73736289	73738823	chr7:73736289-73738823	1	-	73736673	73738797	789624	4	402,174,136,178,	0,1272,2038,2356,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	73736535	73738739	chr7:73736535-73738739	0	-	73737070	73738739	789624	5	156,292,174,136,94,	0,393,1026,1792,2110,
#Partially deleted in new
chr7	73736558	73738832	chr7:73736558-73738832	1	-	73736558	73738797	789624	5	133,182,174,136,187,	0,370,1003,1769,2087,
#Partially deleted in new
chr7	73736563	73738463	chr7:73736563-73738463	0	-	73737300	73738463	789624	5	128,182,140,174,136,	0,365,657,998,1764,
#Partially deleted in new
chr7	73736662	73738510	chr7:73736662-73738510	0	-	73736662	73736662	8553170	4	29,182,174,183,	0,266,899,1665,
#Partially deleted in new
chr7	73736856	73737502	chr7:73736856-73737502	0	-	73736856	73736856	8553170	2	254,282,	0,364,
#Partially deleted in new
chr7	73737567	73738767	chr7:73737567-73738767	0	-	73738066	73738767	789624	4	168,197,136,122,	0,308,760,1078,
#Partially deleted in new
chr7	73737645	73738383	chr7:73737645-73738383	0	-	73737645	73737645	8553170	3	90,267,56,	0,230,682,
#Partially deleted in new
chr7	73737669	73738852	chr7:73737669-73738852	0	-	73737669	73737669	8553170	3	403,136,207,	0,658,976,
#Partially deleted in new
chr7	73737713	73738831	chr7:73737713-73738831	0	-	73737713	73737713	8553170	3	429,136,186,	0,614,932,
#Deleted in new
chr7	73768996	73770270	chr7:73768996-73770270	3	-	73769386	73770049	789624	1	1274,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	73799541	73829366	chr7:73799541-73829366	0	+	73799541	73799541	8553170	4	288,66,74,165,	0,28071,29058,29660,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	73827743	73832684	chr7:73827743-73832684	3	+	73831201	73831831	0	2	78,4085,	0,856,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	73827744	73828950	chr7:73827744-73828950	0	+	73827744	73827744	8553170	2	229,351,	0,855,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	73828173	73832683	chr7:73828173-73832683	1	+	73831201	73831831	0	2	24,4084,	0,426,
#Deleted in new
chr7	73830862	73832693	chr7:73830862-73832693	1	+	73831201	73831831	0	1	1831,	0,
#Partially deleted in new
chr7	73834589	73842535	chr7:73834589-73842535	3	-	73834742	73842140	789624	6	413,90,136,129,127,46,	0,5441,5824,6480,7428,7900,
#Partially deleted in new
chr7	73834914	73842516	chr7:73834914-73842516	0	-	73840099	73842140	789624	5	166,90,129,127,27,	0,5116,6155,7103,7575,
#Partially deleted in new
chr7	73839580	73842516	chr7:73839580-73842516	0	-	73839580	73839580	8553170	4	540,129,127,27,	0,1489,2437,2909,
#Partially deleted in new
chr7	73861158	73865893	chr7:73861158-73865893	3	+	73861194	73865873	789624	3	108,429,317,	0,3834,4418,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	73861171	73865890	chr7:73861171-73865890	0	+	73861194	73861579	789624	4	95,123,429,314,	0,297,3821,4405,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	73985991	73988767	chr7:73985991-73988767	3	+	73985991	73985991	8553170	1	2776,	0,
#Partially deleted in new
chr7	74027788	74069907	chr7:74027788-74069907	3	+	74028187	74068700	789624	33	481,51,30,33,36,93,51,51,42,72,30,72,42,60,54,90,60,147,54,165,42,57,162,45,126,39,72,60,75,39,54,45,1251,	0,7575,8766,9918,13427,14825,15195,15329,16090,17433,18399,18907,19886,20353,20714,23961,24135,25374,26927,28482,28883,29851,32097,32351,32587,33312,35364,35521,35832,37905,38155,38943,40868,
#Partially deleted in new
chr7	74027788	74069907	chr7:74027788-74069907	1	+	74028187	74068700	789624	34	481,51,30,33,36,93,51,51,42,72,30,72,42,60,54,90,60,147,54,165,42,87,57,162,45,225,39,72,60,75,39,54,45,1251,	0,7575,8766,9918,13427,14825,15195,15329,16090,17433,18399,18907,19886,20353,20714,23961,24135,25374,26927,28482,28883,29593,29851,32097,32351,32587,33312,35364,35521,35832,37905,38155,38943,40868,
#Partially deleted in new
chr7	74027788	74068763	chr7:74027788-74068763	1	+	74028187	74068700	789624	32	481,51,30,33,36,93,51,51,42,72,30,72,42,60,54,90,60,147,54,165,42,57,162,45,126,39,72,60,75,39,45,107,	0,7575,8766,9918,13427,14825,15195,15329,16090,17433,18399,18907,19886,20353,20714,23961,24135,25374,26927,28482,28883,29851,32097,32351,32587,33312,35364,35521,35832,37905,38943,40868,
#Partially deleted in new
chr7	74027788	74069899	chr7:74027788-74069899	1	+	74028187	74068700	789624	28	481,51,33,36,93,51,51,42,72,42,60,54,90,60,147,54,87,42,162,45,126,39,72,60,75,39,45,1243,	0,7575,9918,13427,14825,15195,15329,16090,18907,19886,20353,20714,23961,24135,25374,26927,28482,28883,32097,32351,32587,33312,35364,35521,35832,37905,38943,40868,
#Partially deleted in new
chr7	74028100	74045273	chr7:74028100-74045273	0	+	74028187	74045273	789624	8	169,51,33,93,51,51,42,52,	0,7263,9606,14513,14883,15017,15778,17121,
#Partially deleted in new
chr7	74028105	74069677	chr7:74028105-74069677	1	+	74028187	74068700	789624	29	164,51,30,33,93,51,51,42,72,72,60,54,90,60,147,54,87,42,162,45,126,39,72,60,75,39,54,45,1021,	0,7258,8449,9601,14508,14878,15012,15773,17116,18590,20036,20397,23644,23818,25057,26610,28165,28566,31780,32034,32270,32995,35047,35204,35515,37588,37838,38626,40551,
#Partially deleted in new
chr7	74028108	74051983	chr7:74028108-74051983	0	+	74028187	74051983	789624	15	161,51,30,33,93,51,51,42,72,72,42,60,54,90,60,	0,7255,8446,9598,14505,14875,15009,15770,17113,18587,19566,20033,20394,23641,23815,
#Partially deleted in new
chr7	74028113	74038051	chr7:74028113-74038051	0	+	74028113	74028113	8553170	4	156,51,30,345,	0,7250,8441,9593,
#Partially deleted in new
chr7	74028123	74042841	chr7:74028123-74042841	0	+	74028123	74028123	8553170	6	146,51,30,33,36,228,	0,7240,8431,9583,13092,14490,
#Partially deleted in new
chr7	74028125	74043223	chr7:74028125-74043223	0	+	74028125	74028125	8553170	7	144,51,30,33,36,93,240,	0,7238,8429,9581,13090,14488,14858,
#Partially deleted in new
chr7	74028128	74069677	chr7:74028128-74069677	1	+	74028187	74068700	789624	31	141,51,33,36,93,51,66,42,72,30,72,42,60,54,90,60,147,54,165,42,162,45,126,39,72,60,75,39,54,45,1021,	0,7235,9578,13087,14485,14855,14974,15750,17093,18059,18567,19546,20013,20374,23621,23795,25034,26587,28142,28543,31757,32011,32247,32972,35024,35181,35492,37565,37815,38603,40528,
#Partially deleted in new
chr7	74028128	74051955	chr7:74028128-74051955	0	+	74028187	74051955	789624	9	141,51,30,33,72,60,54,90,32,	0,7235,8426,9578,18567,20013,20374,23621,23795,
#Partially deleted in new
chr7	74028140	74068700	chr7:74028140-74068700	1	+	74028187	74068700	789624	33	129,51,30,33,36,93,51,51,42,72,30,72,42,60,54,90,60,147,54,165,42,57,180,45,126,39,72,60,75,39,54,45,44,	0,7223,8414,9566,13075,14473,14843,14977,15738,17081,18047,18555,19534,20001,20362,23609,23783,25022,26575,28130,28531,29499,31727,31999,32235,32960,35012,35169,35480,37553,37803,38591,40516,
#Partially deleted in new
chr7	74028143	74043189	chr7:74028143-74043189	0	+	74028143	74028143	8553170	6	126,51,33,36,93,206,	0,7220,9563,13072,14470,14840,
#Partially deleted in new
chr7	74028156	74069678	chr7:74028156-74069678	1	+	74028187	74068700	789624	30	113,51,33,36,93,51,51,42,72,30,72,42,60,54,90,60,147,54,165,42,162,45,126,39,72,60,75,39,45,1022,	0,7207,9550,13059,14457,14827,14961,15722,17065,18031,18539,19518,19985,20346,23593,23767,25006,26559,28114,28515,31729,31983,32219,32944,34996,35153,35464,37537,38575,40500,
#Partially deleted in new
chr7	74028157	74069907	chr7:74028157-74069907	1	+	74028187	74068700	789624	29	112,51,30,33,36,93,51,51,42,72,30,72,60,54,90,60,147,54,165,42,162,126,39,72,60,75,39,45,1251,	0,7206,8397,9549,13058,14456,14826,14960,15721,17064,18030,18538,19984,20345,23592,23766,25005,26558,28113,28514,31728,32218,32943,34995,35152,35463,37536,38574,40499,
#Partially deleted in new
chr7	74028162	74069677	chr7:74028162-74069677	1	+	74028187	74068700	789624	32	107,51,33,36,93,51,51,42,72,30,72,42,60,54,90,60,147,54,165,42,57,162,45,126,39,72,60,75,39,54,45,1021,	0,7201,9544,13053,14451,14821,14955,15716,17059,18025,18533,19512,19979,20340,23587,23761,25000,26553,28108,28509,29477,31723,31977,32213,32938,34990,35147,35458,37531,37781,38569,40494,
#Partially deleted in new
chr7	74028169	74069907	chr7:74028169-74069907	1	+	74028187	74068700	789624	32	100,51,30,33,36,93,51,66,42,72,30,72,42,60,54,90,60,147,54,165,42,57,162,45,126,39,72,60,75,39,45,1251,	0,7194,8385,9537,13046,14444,14814,14933,15709,17052,18018,18526,19505,19972,20333,23580,23754,24993,26546,28101,28502,29470,31716,31970,32206,32931,34983,35140,35451,37524,38562,40487,
#Partially deleted in new
chr7	74028172	74048201	chr7:74028172-74048201	0	+	74028187	74048201	789624	12	97,51,30,33,36,93,51,51,42,72,42,60,	0,7191,8382,9534,13043,14441,14811,14945,15706,18523,19502,19969,
#Partially deleted in new
chr7	74028172	74069904	chr7:74028172-74069904	1	+	74028187	74068700	789624	31	97,51,30,33,36,93,51,66,42,72,30,72,42,60,54,90,60,147,54,165,42,162,45,126,39,72,60,75,39,45,1248,	0,7191,8382,9534,13043,14441,14811,14930,15706,17049,18015,18523,19502,19969,20330,23577,23751,24990,26543,28098,28499,31713,31967,32203,32928,34980,35137,35448,37521,38559,40484,
#Partially deleted in new
chr7	74028172	74043284	chr7:74028172-74043284	0	+	74028172	74028172	8553170	8	97,51,30,33,36,93,51,167,	0,7191,8382,9534,13043,14441,14811,14945,
#Partially deleted in new
chr7	74028172	74045315	chr7:74028172-74045315	0	+	74028172	74028172	8553170	9	97,51,30,33,93,51,51,42,94,	0,7191,8382,9534,14441,14811,14945,15706,17049,
#Partially deleted in new
chr7	74028174	74069677	chr7:74028174-74069677	1	+	74028187	74068700	789624	25	95,51,30,33,36,30,72,60,54,90,60,147,54,165,42,162,45,126,39,72,60,75,39,45,1021,	0,7189,8380,9532,13041,18013,18521,19967,20328,23575,23749,24988,26541,28096,28497,31711,31965,32201,32926,34978,35135,35446,37519,38557,40482,
#Partially deleted in new
chr7	74028174	74069678	chr7:74028174-74069678	1	+	74028187	74068700	789624	32	95,51,30,33,36,93,51,51,42,72,30,72,42,60,54,90,60,147,54,165,42,162,45,126,39,72,60,75,39,54,45,1022,	0,7189,8380,9532,13041,14439,14809,14943,15704,17047,18013,18521,19500,19967,20328,23575,23749,24988,26541,28096,28497,31711,31965,32201,32926,34978,35135,35446,37519,37769,38557,40482,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	74028174	74043168	chr7:74028174-74043168	0	+	74028187	74035488	789624	8	95,325,30,33,36,93,51,51,	0,7189,8380,9532,13041,14439,14809,14943,
#Partially deleted in new
chr7	74028174	74046767	chr7:74028174-74046767	0	+	74028187	74046767	789624	10	95,51,30,33,36,93,51,51,30,72,	0,7189,8380,9532,13041,14439,14809,14943,18013,18521,
#Partially deleted in new
chr7	74028175	74048202	chr7:74028175-74048202	0	+	74028187	74048202	789624	9	94,51,30,33,36,93,72,42,61,	0,7188,8379,9531,13040,14438,18520,19499,19966,
#Partially deleted in new
chr7	74028175	74043239	chr7:74028175-74043239	0	+	74028175	74028175	8553170	7	94,51,30,33,93,51,122,	0,7188,8379,9531,14438,14808,14942,
#Partially deleted in new
chr7	74028187	74068700	chr7:74028187-74068700	1	+	74028187	74068700	789624	33	82,51,30,33,36,93,51,51,42,72,30,72,42,60,54,90,60,147,54,165,42,57,162,45,225,39,72,60,75,39,54,45,44,	0,7176,8367,9519,13028,14426,14796,14930,15691,17034,18000,18508,19487,19954,20315,23562,23736,24975,26528,28083,28484,29452,31698,31952,32188,32913,34965,35122,35433,37506,37756,38544,40469,
#Partially deleted in new
chr7	74042633	74045259	chr7:74042633-74045259	0	+	74042633	74043552	789624	6	73,51,51,234,42,38,	0,350,484,911,1245,2588,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	74045762	74047717	chr7:74045762-74047717	0	+	74045762	74045762	8553170	3	455,72,43,	0,933,1912,
#Partially deleted in new
chr7	74046658	74052236	chr7:74046658-74052236	0	+	74046658	74046658	8553170	5	109,42,60,54,487,	0,1016,1483,1844,5091,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	74052293	74056365	chr7:74052293-74056365	0	+	74052293	74052293	8553170	4	268,147,54,95,	0,869,2422,3977,
#Partially deleted in new
chr7	74052850	74056347	chr7:74052850-74056347	0	+	74052850	74052850	8553170	3	459,54,77,	0,1865,3420,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	74059575	74062284	chr7:74059575-74062284	3	-	74059575	74059575	8553170	2	457,75,	0,2634,
#Partially deleted in new
chr7	74082932	74122525	chr7:74082932-74122525	1	+	74083034	74121301	789624	16	247,97,139,110,207,106,167,184,87,132,60,66,157,56,158,1387,	0,2815,13689,14147,16099,22942,23144,24077,24938,25972,28715,29000,32869,37650,37959,38206,
#Partially deleted in new
chr7	74083939	74122525	chr7:74083939-74122525	3	+	74083990	74121301	0	16	106,97,139,110,207,106,167,184,87,132,60,66,157,56,158,1387,	0,1808,12682,13140,15092,21935,22137,23070,23931,24965,27708,27993,31862,36643,36952,37199,
#Partially deleted in new
chr7	74083990	74121301	chr7:74083990-74121301	0	+	74083990	74107107	0	16	55,97,139,110,207,106,167,123,87,132,60,66,157,56,158,163,	0,1757,12631,13089,15041,21884,22086,23080,23880,24914,27657,27942,31811,36592,36901,37148,
#Partially deleted in new
chr7	74093078	74121458	chr7:74093078-74121458	1	+	74093249	74121301	0	15	221,139,110,207,106,167,184,87,132,60,66,157,56,158,320,	0,3543,4001,5953,12796,12998,13931,14792,15826,18569,18854,22723,27504,27813,28060,
#Partially deleted in new
chr7	74093955	74097189	chr7:74093955-74097189	0	+	74093955	74093955	8553170	3	320,139,110,	0,2666,3124,
#Partially deleted in new
chr7	74094232	74105905	chr7:74094232-74105905	0	+	74094232	74094232	8553170	5	100,139,110,207,31,	0,2389,2847,4799,11642,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	74097102	74111440	chr7:74097102-74111440	0	+	74097102	74097102	8553170	7	87,207,106,167,184,87,2536,	0,1929,8772,8974,9907,10768,11802,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	74115367	74121029	chr7:74115367-74121029	0	+	74115367	74115367	8553170	3	591,56,138,	0,5215,5524,
#Partially deleted in new
chr7	74174244	74197101	chr7:74174244-74197101	3	+	74174383	74195308	789624	7	198,188,65,97,60,138,1933,	0,13366,15428,15577,16002,20496,20924,
#Partially deleted in new
chr7	74174330	74190287	chr7:74174330-74190287	0	+	74174330	74174330	8553170	4	112,188,65,466,	0,13280,15342,15491,
#Partially deleted in new
chr7	74174355	74197096	chr7:74174355-74197096	1	+	74174383	74195308	789624	6	87,188,65,97,138,1928,	0,13255,15317,15466,20385,20813,
#Partially deleted in new
chr7	74174358	74189973	chr7:74174358-74189973	0	+	74174358	74174358	8553170	3	84,188,301,	0,13252,15314,
#Partially deleted in new
chr7	74183821	74194805	chr7:74183821-74194805	0	+	74183821	74183821	8553170	6	100,188,65,97,60,65,	0,3789,5851,6000,6425,10919,
#Deleted in new
chr7	74191197	74191294	chr7:74191197-74191294	3	+	74191197	74191197	5263520	1	97,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	74199651	74219784	chr7:74199651-74219784	0	+	74215975	74219784	789624	6	34,158,189,123,40,41,	0,10279,15170,16295,17173,20092,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	74209395	74229834	chr7:74209395-74229834	3	+	74215975	74224742	0	13	693,123,40,44,49,38,36,31,56,60,180,122,891,	0,6551,7429,10348,10564,10821,11188,11308,12241,14328,14622,15243,19548,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	74209417	74229831	chr7:74209417-74229831	1	+	74215975	74224742	0	14	671,189,123,40,44,49,38,36,31,56,60,180,122,888,	0,5404,6529,7407,10326,10542,10799,11166,11286,12219,14306,14600,15221,19526,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	74209926	74215277	chr7:74209926-74215277	0	+	74209926	74209926	8553170	2	162,456,	0,4895,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	74209980	74226508	chr7:74209980-74226508	1	+	74215975	74224742	0	13	108,123,40,44,49,38,36,31,56,60,180,122,1566,	0,5966,6844,9763,9979,10236,10603,10723,11656,13743,14037,14658,14962,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	74210005	74229831	chr7:74210005-74229831	1	+	74215975	74224742	0	14	83,119,123,40,44,49,38,36,31,56,60,180,122,888,	0,4816,5941,6819,9738,9954,10211,10578,10698,11631,13718,14012,14633,18938,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	74210005	74219972	chr7:74210005-74219972	0	+	74215975	74219972	789624	6	83,278,123,40,44,13,	0,4816,5941,6819,9738,9954,
#Partially deleted in new
chr7	74210005	74229831	chr7:74210005-74229831	0	+	74215975	74223727	0	12	83,123,40,44,49,38,36,31,60,180,122,888,	0,5941,6819,9738,9954,10211,10578,10698,13718,14012,14633,18938,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	74210022	74220734	chr7:74210022-74220734	0	+	74215975	74220734	789624	9	66,189,123,10,44,49,38,36,31,	0,4799,5924,6802,9721,9937,10194,10561,10681,
#Partially deleted in new
chr7	74220457	74229072	chr7:74220457-74229072	0	+	74220457	74220457	8553170	7	162,31,56,60,180,122,129,	0,246,1179,3266,3560,4181,8486,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	74231498	74254389	chr7:74231498-74254389	1	-	74232105	74254383	789624	10	718,114,81,66,158,101,107,42,70,119,	0,4033,5863,7424,8439,11647,17513,18240,20930,22772,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	74231503	74254458	chr7:74231503-74254458	1	-	74232105	74249761	789624	10	713,114,81,66,158,101,102,42,70,188,	0,4028,5858,7419,8434,11642,15158,18235,20925,22767,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	74231536	74254444	chr7:74231536-74254444	3	-	74232105	74254383	789624	11	680,114,81,66,158,101,102,107,42,70,174,	0,3995,5825,7386,8401,11609,15125,17475,18202,20892,22734,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	74231773	74240007	chr7:74231773-74240007	0	-	74235574	74240007	789624	5	443,114,154,66,70,	0,3758,5515,7149,8164,
#Partially deleted in new
chr7	74235530	74254309	chr7:74235530-74254309	0	-	74249145	74254309	789624	9	115,81,66,158,101,209,42,70,39,	0,1831,3392,4407,7615,13481,14208,16898,18740,
#Partially deleted in new
chr7	74235530	74254367	chr7:74235530-74254367	0	-	74243192	74254367	789624	8	115,81,66,158,101,42,70,97,	0,1831,3392,4407,7615,14208,16898,18740,
#Partially deleted in new
chr7	74235531	74254407	chr7:74235531-74254407	0	-	74246754	74254383	789624	9	114,81,66,158,101,102,42,70,137,	0,1830,3391,4406,7614,11130,14207,16897,18739,
#Partially deleted in new
chr7	74237349	74254337	chr7:74237349-74254337	0	-	74249808	74254337	789624	9	93,66,158,101,102,209,91,70,67,	0,1573,2588,5796,9312,11662,12389,15079,16921,
#Partially deleted in new
chr7	74237407	74252494	chr7:74237407-74252494	0	-	74249808	74252494	789624	8	35,66,158,101,102,107,91,66,	0,1515,2530,5738,9254,11604,12331,15021,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	74238922	74254389	chr7:74238922-74254389	0	-	74253716	74254383	789624	8	66,158,101,107,42,70,119,119,	0,1015,4223,10089,10816,13506,14676,15348,
#Partially deleted in new
chr7	74238936	74254389	chr7:74238936-74254389	0	-	74249145	74254389	789624	8	52,158,101,102,209,42,70,119,	0,1001,4209,7725,10075,10802,13492,15334,
#Partially deleted in new
chr7	74246714	74254376	chr7:74246714-74254376	0	-	74246714	74246714	8553170	4	49,107,42,106,	0,2297,3024,7556,
#Partially deleted in new
chr7	74289474	74405943	chr7:74289474-74405943	3	+	74317546	74403848	0	17	260,188,557,125,214,198,104,61,105,936,58,84,157,160,186,63,2107,	0,28005,48973,64405,66935,67805,70700,74780,83457,86412,91331,97046,99628,107599,110895,112030,114362,
#Partially deleted in new
chr7	74289474	74405930	chr7:74289474-74405930	1	+	74317546	74403848	0	16	260,188,557,125,214,198,104,61,936,58,84,157,160,186,63,2094,	0,28005,48973,64405,66935,67805,70700,74780,86412,91331,97046,99628,107599,110895,112030,114362,
#Partially deleted in new
chr7	74317546	74403848	chr7:74317546-74403848	1	+	74317546	74403848	0	16	121,557,125,214,198,104,61,105,936,58,84,157,160,186,63,12,	0,20901,36333,38863,39733,42628,46708,55385,58340,63259,68974,71556,79527,82823,83958,86290,
#Partially deleted in new
chr7	74376069	74381041	chr7:74376069-74381041	0	+	74376069	74376069	8553170	2	753,236,	0,4736,
#Partially deleted in new
chr7	74376694	74397165	chr7:74376694-74397165	0	+	74376694	74397165	789624	6	128,58,49,77,157,92,	0,4111,4887,9826,12408,20379,
#Partially deleted in new
chr7	74380023	74389149	chr7:74380023-74389149	0	+	74380023	74380023	8553170	3	840,84,47,	0,6497,9079,
#Partially deleted in new
chr7	74386383	74389432	chr7:74386383-74389432	0	+	74386383	74386383	8553170	2	221,330,	0,2719,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	74388669	74397173	chr7:74388669-74397173	0	+	74388669	74388669	8553170	2	590,100,	0,8404,
#Partially deleted in new
chr7	74400481	74404326	chr7:74400481-74404326	0	+	74400481	74403848	789624	2	74,490,	0,3355,
#Partially deleted in new
chr7	74453789	74602590	chr7:74453789-74602590	3	+	74508080	74602433	0	27	387,129,142,156,184,311,90,84,184,26,109,38,81,90,48,66,184,50,102,84,184,29,78,193,38,137,226,	0,54285,59040,61651,64349,65619,67418,70281,75944,81323,82377,84346,84890,86089,90965,91954,93313,101384,101603,103849,105071,105837,136061,137035,141224,147254,148575,
#Partially deleted in new
chr7	74453969	74602604	chr7:74453969-74602604	1	+	74508080	74602433	0	27	207,129,142,252,184,311,90,84,184,26,109,38,81,90,48,66,184,50,57,84,184,29,78,193,38,137,240,	0,54105,58860,61375,64169,65439,67238,70101,75764,81143,82197,84166,84710,85909,90785,91774,93133,101204,101468,103669,104891,105657,135881,136855,141044,147074,148395,
#Partially deleted in new
chr7	74454108	74602601	chr7:74454108-74602601	1	+	74508080	74602433	0	27	68,129,142,156,184,311,90,84,184,26,109,38,81,90,48,66,184,50,57,84,184,29,78,193,38,137,237,	0,53966,58721,61332,64030,65300,67099,69962,75625,81004,82058,84027,84571,85770,90646,91635,92994,101065,101329,103530,104752,105518,135742,136716,140905,146935,148256,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	74487427	74487540	chr7:74487427-74487540	7	-	74487427	74487427	16724991	1	113,	0,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr7	74505991	74602591	chr7:74505991-74602591	1	+	74508080	74601297	789624	26	1685,129,142,156,184,311,90,84,184,26,109,38,81,90,48,66,184,50,57,84,184,29,78,193,38,1548,	0,2083,6838,9449,12147,13417,15216,18079,23742,29121,30175,32144,32688,33887,38763,39752,41111,49182,49446,51647,52869,53635,83859,84833,89022,95052,
#Partially deleted in new
chr7	74508074	74559660	chr7:74508074-74559660	0	+	74508074	74508074	8553170	20	129,142,156,184,311,90,84,184,26,109,38,81,90,48,66,184,50,84,184,34,	0,4755,7366,10064,11334,13133,15996,21659,27038,28092,30061,30605,31804,36680,37669,39028,47099,49564,50786,51552,
#Partially deleted in new
chr7	74545761	74601106	chr7:74545761-74601106	0	+	74545761	74601106	789624	10	48,50,57,84,184,29,78,193,38,63,	0,9412,9676,11877,13099,13865,44089,45063,49252,55282,
#Partially deleted in new
chr7	74600959	74602583	chr7:74600959-74602583	0	+	74600959	74600959	8553170	2	221,219,	0,1405,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	74606912	74607299	chr7:74606912-74607299	3	+	74606912	74606912	8553170	1	387,	0,
#Partially deleted in new
chr7	74633509	74633884	chr7:74633509-74633884	3	-	74633509	74633509	8553170	1	375,	0,
#Partially deleted in new
chr7	74657666	74691108	chr7:74657666-74691108	0	+	74657666	74657666	8553170	2	402,136,	0,33306,
#Partially deleted in new
chr7	74657684	74760692	chr7:74657684-74760692	3	+	74689128	74758838	0	35	384,104,139,135,184,29,55,44,78,60,57,63,111,66,184,59,72,184,59,72,184,59,75,102,66,184,56,81,84,184,29,42,42,76,1145,	0,31439,33288,41276,42562,42921,47479,48705,53347,57172,59209,61194,71101,72544,74794,76238,77776,78815,80360,85764,87073,88198,88652,90330,91340,91583,93676,94405,95409,96161,97824,99135,100274,101095,101863,
#Partially deleted in new
chr7	74657757	74760692	chr7:74657757-74760692	1	+	74689128	74758838	0	34	311,104,139,135,184,29,55,44,78,57,63,111,66,184,59,72,184,59,72,184,59,75,102,66,184,56,81,84,184,29,42,42,76,1145,	0,31366,33215,41203,42489,42848,47406,48632,53274,59136,61121,71028,72471,74721,76165,77703,78742,80287,85691,87000,88125,88579,90257,91267,91510,93603,94332,95336,96088,97751,99062,100201,101022,101790,
#Partially deleted in new
chr7	74657757	74760692	chr7:74657757-74760692	1	+	74689128	74758838	0	33	311,104,139,135,184,29,55,44,78,57,111,66,184,59,72,184,59,72,184,59,75,102,66,184,56,81,84,184,29,42,42,76,1145,	0,31366,33215,41203,42489,42848,47406,48632,53274,59136,71028,72471,74721,76165,77703,78742,80287,85691,87000,88125,88579,90257,91267,91510,93603,94332,95336,96088,97751,99062,100201,101022,101790,
#Partially deleted in new
chr7	74657757	74760692	chr7:74657757-74760692	1	+	74689128	74758838	0	34	311,104,139,135,184,29,55,44,78,60,57,111,66,184,59,72,184,59,72,184,59,75,102,66,184,56,81,84,184,29,42,42,76,1145,	0,31366,33215,41203,42489,42848,47406,48632,53274,57099,59136,71028,72471,74721,76165,77703,78742,80287,85691,87000,88125,88579,90257,91267,91510,93603,94332,95336,96088,97751,99062,100201,101022,101790,
#Partially deleted in new
chr7	74658030	74717066	chr7:74658030-74717066	1	+	74689128	74716955	0	10	38,104,139,135,184,29,55,44,78,173,	0,31093,32942,40930,42216,42575,47133,48359,53001,58863,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	74684656	74699041	chr7:74684656-74699041	0	+	74689128	74699041	789624	4	248,104,139,81,	0,4467,6316,14304,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	74688938	74728765	chr7:74688938-74728765	3	-	74688938	74688938	789624	4	333,171,121,61,	0,11271,38463,39766,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	74699459	74728849	chr7:74699459-74728849	1	-	74699459	74699459	8553170	3	921,121,145,	0,27942,29245,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	74700086	74727886	chr7:74700086-74727886	0	-	74700086	74700086	8553170	3	294,121,163,	0,27315,27637,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	74700086	74729001	chr7:74700086-74729001	0	-	74700086	74700086	8553170	4	294,54,121,297,	0,22648,27315,28618,
#Partially deleted in new
chr7	74705176	74714944	chr7:74705176-74714944	0	+	74705176	74705176	8553170	4	42,44,78,88,	0,1213,5855,9680,
#Partially deleted in new
chr7	74716611	74730289	chr7:74716611-74730289	0	+	74716611	74716611	8553170	4	339,63,111,61,	0,2267,12174,13617,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	74726443	74728889	chr7:74726443-74728889	0	-	74726443	74726443	8553170	2	1079,185,	0,2261,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	74726949	74727883	chr7:74726949-74727883	1	-	74726949	74726949	8553170	2	573,160,	0,774,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	74728002	74735513	chr7:74728002-74735513	0	+	74728002	74728002	8553170	6	66,111,66,184,59,53,	0,783,2226,4476,5920,7458,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	74732536	74744941	chr7:74732536-74744941	0	+	74732536	74732536	8553170	8	126,59,72,184,59,72,112,184,	0,1386,2924,3963,5508,10912,11602,12221,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	74733595	74738119	chr7:74733595-74738119	0	+	74733595	74733595	8553170	4	386,72,184,75,	0,1865,2904,4449,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	74736502	74743882	chr7:74736502-74743882	0	+	74736502	74736502	8553170	3	181,59,434,	0,1542,6946,
#Partially deleted in new
chr7	74738022	74740071	chr7:74738022-74740071	0	+	74738022	74738022	8553170	2	81,266,	0,1783,
#Deleted in new
chr7	74741456	74742121	chr7:74741456-74742121	7	-	74741456	74741456	16724991	1	665,	0,
#Partially deleted in new
chr7	74744343	74749452	chr7:74744343-74749452	0	+	74744343	74744343	8553170	7	165,184,59,75,102,66,185,	0,414,1539,1993,3671,4681,4924,
#Partially deleted in new
chr7	74744745	74746253	chr7:74744745-74746253	0	+	74744745	74744745	8553170	2	196,371,	0,1137,
#Partially deleted in new
chr7	74746055	74749396	chr7:74746055-74749396	0	+	74746055	74746055	8553170	4	356,102,66,129,	0,1959,2969,3212,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	74752089	74754540	chr7:74752089-74754540	0	+	74752089	74752089	8553170	3	81,84,695,	0,1004,1756,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	74753844	74755878	chr7:74753844-74755878	0	+	74753844	74753844	8553170	2	185,370,	0,1664,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	74754095	74760690	chr7:74754095-74760690	0	+	74754095	74754095	8553170	4	1442,42,42,1911,	0,2724,3863,4684,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	74755239	74759959	chr7:74755239-74759959	0	+	74755239	74755239	8553170	3	1622,42,1180,	0,2719,3540,
#Partially deleted in new
chr7	74773961	74789313	chr7:74773961-74789313	3	+	74774031	74789160	0	11	142,81,76,166,56,123,108,118,105,146,275,	0,3305,5120,5295,6818,8977,9563,11220,14022,14597,15077,
#Partially deleted in new
chr7	74774010	74789314	chr7:74774010-74789314	0	+	74774010	74774010	8553170	9	93,154,76,166,56,694,118,721,276,	0,3256,5071,5246,6769,8928,11171,13973,15028,
#Partially deleted in new
chr7	74774010	74783540	chr7:74774010-74783540	0	+	74774010	74774010	8553170	6	93,81,76,166,56,602,	0,3256,5071,5246,6769,8928,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	74776808	74785292	chr7:74776808-74785292	0	+	74776808	74776808	8553170	9	45,81,148,76,166,56,123,108,111,	0,458,745,2273,2448,3971,6130,6716,8373,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	74777266	74781622	chr7:74777266-74781622	0	+	74777266	74777266	8553170	5	81,76,166,56,71,	0,1815,1990,3513,4285,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	74777268	74782980	chr7:74777268-74782980	0	+	74777268	74782980	789624	6	79,76,166,70,56,42,	0,1813,1988,2888,3511,5670,
#Partially deleted in new
chr7	74777268	74789315	chr7:74777268-74789315	0	+	74777268	74777268	8553170	7	79,56,694,80,105,146,277,	0,3511,5670,7913,10715,11290,11770,
#Partially deleted in new
chr7	74777268	74783583	chr7:74777268-74783583	0	+	74777268	74779334	789624	4	79,166,56,645,	0,1988,3511,5670,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	74780395	74783405	chr7:74780395-74783405	0	+	74780395	74780395	8553170	2	440,467,	0,2543,
#Partially deleted in new
chr7	74783442	74785546	chr7:74783442-74785546	0	+	74783442	74783442	8553170	2	190,365,	0,1739,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	74796143	74851551	chr7:74796143-74851551	3	-	74796661	74836378	789624	16	2122,29,184,84,78,66,57,78,44,55,29,184,120,139,104,185,	0,5841,7154,8633,10790,12964,14752,16595,23410,23825,26283,26480,28789,36661,40136,55223,
#Partially deleted in new
chr7	74801894	74812796	chr7:74801894-74812796	0	-	74801894	74801894	8553170	7	119,184,84,78,66,57,58,	0,1403,2882,5039,7213,9001,10844,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	74804579	74807049	chr7:74804579-74807049	0	-	74804579	74804579	8553170	2	281,116,	0,2354,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	74818806	74821224	chr7:74818806-74821224	0	-	74818806	74818806	8553170	2	791,1256,	0,1162,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	74821533	74851536	chr7:74821533-74851536	0	-	74821533	74821533	8553170	5	1274,120,139,104,170,	0,3399,11271,14746,29833,
#Partially deleted in new
chr7	74832632	74851529	chr7:74832632-74851529	1	-	74832715	74836378	789624	3	311,104,163,	0,3647,18734,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	74882162	74890610	chr7:74882162-74890610	5	-	74882162	74882162	16724991	8	1301,108,80,91,124,117,86,223,	0,1565,1981,2271,2860,5520,6149,8225,
#Partially deleted in new
chr7	74882704	74888397	chr7:74882704-74888397	7	-	74882704	74882704	16724991	9	58,106,115,108,80,91,124,117,86,	0,231,644,1023,1439,1729,2318,4978,5607,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	74883412	74890566	chr7:74883412-74890566	4	-	74883412	74883412	16724991	9	51,108,80,91,124,117,86,139,179,	0,315,731,1021,1610,4270,4899,5149,6975,
#Partially deleted in new
chr7	74883766	74890566	chr7:74883766-74890566	4	-	74883766	74883766	16724991	5	457,91,117,86,296,	0,667,3916,4545,6504,
#Partially deleted in new
chr7	74883794	74890566	chr7:74883794-74890566	4	-	74883794	74883794	16724991	6	429,91,124,117,86,179,	0,639,1228,3888,4517,6593,
#Partially deleted in new
chr7	74894115	74897835	chr7:74894115-74897835	7	+	74894115	74894115	16724991	4	142,87,103,184,	0,2030,2293,3536,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	74895815	74895917	chr7:74895815-74895917	3	+	74895815	74895815	8553170	1	102,	0,
#Partially deleted in new
chr7	74906672	74913256	chr7:74906672-74913256	7	-	74906672	74906672	16724991	6	57,244,86,59,219,106,	0,179,2849,4164,5256,6478,
#Partially deleted in new
chr7	74964817	75024798	chr7:74964817-75024798	3	+	74964985	75024699	789624	9	281,71,194,133,124,111,83,95,165,	0,43176,52780,53172,54154,55221,57056,59622,59816,
#Partially deleted in new
chr7	75007887	75021943	chr7:75007887-75021943	0	+	75007887	75007887	8553170	6	177,194,133,124,111,70,	0,9710,10102,11084,12151,13986,
#Partially deleted in new
chr7	75027121	75073881	chr7:75027121-75073881	1	-	75028031	75073737	789624	11	958,86,174,88,182,85,52,67,129,130,468,	0,25589,28779,30407,31466,34085,36170,37460,39542,43518,46292,
#Partially deleted in new
chr7	75042182	75073793	chr7:75042182-75073793	3	-	75043031	75073737	789624	11	927,86,174,88,182,85,52,67,129,130,380,	0,10528,13718,15346,16405,19024,21109,22399,24481,28457,31231,
#Partially deleted in new
chr7	75042973	75064728	chr7:75042973-75064728	0	-	75042973	75042973	8553170	8	136,86,174,88,182,85,52,147,	0,9737,12927,14555,15614,18233,20318,21608,
#Partially deleted in new
chr7	75055574	75073790	chr7:75055574-75073790	0	-	75055574	75055574	8553170	9	500,88,182,85,52,67,129,130,377,	0,1954,3013,5632,7717,9007,11089,15065,17839,
#Partially deleted in new
chr7	75056516	75073881	chr7:75056516-75073881	1	-	75056704	75073737	789624	9	208,88,182,85,52,67,129,130,468,	0,1012,2071,4690,6775,8065,10147,14123,16897,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	75057876	75058188	chr7:75057876-75058188	3	+	75057876	75057876	8553170	1	312,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	75063313	75074228	chr7:75063313-75074228	0	-	75063313	75074097	789624	5	30,67,129,130,236,	0,1268,3350,7326,10679,
#Deleted in new
chr7	75092572	75094141	chr7:75092572-75094141	0	+	75092572	75092572	8553170	2	193,291,	0,1278,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	75092572	75123877	chr7:75092572-75123877	0	+	75092572	75092572	8553170	5	193,104,139,120,742,	0,16387,19824,28318,30563,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	75092580	75149817	chr7:75092580-75149817	3	+	75108964	75149297	0	16	185,104,139,120,184,29,55,44,78,57,66,78,84,184,29,2124,	0,16379,19816,28310,30555,30907,33335,33761,40554,42420,44204,46369,48522,49901,51369,55113,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	75092591	75146950	chr7:75092591-75146950	1	+	75108964	75146511	789624	16	174,104,139,120,184,29,55,44,78,57,66,78,84,184,29,507,	0,16368,19805,28299,30544,30896,33324,33750,40543,42409,44193,46358,48511,49890,51358,53852,
#Partially deleted in new
chr7	75092599	75112699	chr7:75092599-75112699	1	+	75108964	75112624	8553170	3	166,104,303,	0,16360,19797,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	75092611	75149817	chr7:75092611-75149817	0	+	75108964	75133189	0	15	154,104,139,120,184,29,55,78,57,66,78,84,184,29,2124,	0,16348,19785,28279,30524,30876,33304,40523,42389,44173,46338,48491,49870,51338,55082,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	75120626	75123189	chr7:75120626-75123189	0	+	75120626	75120626	8553170	2	384,54,	0,2509,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	75125656	75149817	chr7:75125656-75149817	0	+	75125656	75125656	8553170	10	314,44,78,57,66,78,84,184,29,2124,	0,685,7478,9344,11128,13293,15446,16825,18293,22037,
#Partially deleted in new
chr7	75133154	75144068	chr7:75133154-75144068	0	+	75133154	75133154	8553170	7	58,57,66,78,84,184,119,	0,1846,3630,5795,7948,9327,10795,
#Partially deleted in new
chr7	75156638	75172044	chr7:75156638-75172044	7	-	75156638	75156638	16724991	11	277,146,105,118,108,123,56,166,76,79,173,	0,611,1227,4020,5687,6258,8485,9898,10163,11993,15233,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	75185384	75191533	chr7:75185384-75191533	5	-	75185384	75185384	16724991	4	1911,42,42,995,	0,2690,3830,5154,
#Partially deleted in new
chr7	75185395	75237696	chr7:75185395-75237696	5	-	75185395	75185395	16724991	24	1132,76,42,42,29,184,82,81,56,184,66,102,75,59,184,72,59,184,72,59,184,66,111,404,	0,1824,2679,3819,5143,6651,7503,8507,9261,11217,11578,12552,14255,14725,15725,17146,22560,23980,25132,26683,28010,30360,31758,51897,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	75186115	75190836	chr7:75186115-75190836	4	-	75186115	75186115	16724991	3	1180,42,1622,	0,1959,3099,
#Partially deleted in new
chr7	75187060	75237696	chr7:75187060-75237696	5	-	75187060	75187060	16724991	23	235,42,42,29,184,82,81,56,184,66,102,75,59,184,72,59,184,72,59,184,66,111,404,	0,1014,2154,3478,4986,5838,6842,7596,9552,9913,10887,12590,13060,14060,15481,20895,22315,23467,25018,26345,28695,30093,50232,
#Partially deleted in new
chr7	75187241	75217264	chr7:75187241-75217264	5	-	75187241	75187241	16724991	22	54,42,42,29,184,82,81,56,184,66,102,75,59,184,72,59,184,72,59,184,66,111,	0,833,1973,3297,4805,5657,6661,7415,9371,9732,10706,12409,12879,13879,15300,20714,22134,23286,24837,26164,28514,29912,
#Partially deleted in new
chr7	75196667	75200006	chr7:75196667-75200006	4	-	75196667	75196667	16724991	4	129,66,102,356,	0,306,1280,2983,
#Partially deleted in new
chr7	75199670	75201718	chr7:75199670-75201718	4	-	75199670	75199670	16724991	4	55,59,184,165,	0,450,1450,1883,
#Partially deleted in new
chr7	75199808	75201316	chr7:75199808-75201316	4	-	75199808	75199808	16724991	2	371,196,	0,1312,
#Deleted in new
chr7	75203925	75204711	chr7:75203925-75204711	7	+	75203925	75203925	16724991	1	786,	0,
#Partially deleted in new
chr7	75205994	75209408	chr7:75205994-75209408	4	-	75205994	75205994	16724991	3	266,59,33,	0,1961,3381,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	75225432	75234310	chr7:75225432-75234310	3	+	75225432	75225432	8553170	3	308,92,375,	0,6944,8503,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	75232927	75233924	chr7:75232927-75233924	3	+	75232927	75232927	8553170	2	87,193,	0,804,
#Deleted in new
chr7	75237292	75237405	chr7:75237292-75237405	7	-	75237292	75237292	16724991	1	113,	0,
#Partially deleted in new
chr7	75281266	75287118	chr7:75281266-75287118	7	+	75281266	75281266	16724991	7	106,219,27,59,86,244,57,	0,1101,1902,2352,3638,5429,5795,
#Partially deleted in new
chr7	75288119	75299795	chr7:75288119-75299795	7	-	75288119	75288119	16724991	5	94,186,103,87,142,	0,7821,9275,9554,11534,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	75297989	75298091	chr7:75297989-75298091	3	-	75297989	75297989	8553170	1	102,	0,
#Partially deleted in new
chr7	75309143	75315046	chr7:75309143-75315046	7	+	75309143	75309143	16724991	6	157,219,59,86,244,57,	0,1152,2403,3689,5480,5846,
#Partially deleted in new
chr7	75316047	75327765	chr7:75316047-75327765	7	-	75316047	75316047	16724991	5	93,186,113,87,142,	0,7821,9316,9595,11576,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	75325958	75326060	chr7:75325958-75326060	3	-	75325958	75325958	8553170	1	102,	0,
#Partially deleted in new
chr7	75337161	75343013	chr7:75337161-75343013	7	+	75337161	75337161	16724991	7	159,219,27,108,90,246,60,	0,1100,1902,2345,3635,5430,5792,
#Partially deleted in new
chr7	75344014	75359550	chr7:75344014-75359550	7	-	75344014	75344014	16724991	7	93,186,113,87,140,347,162,	0,7821,9275,9554,11534,14895,15374,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	75353884	75353986	chr7:75353884-75353986	3	-	75353884	75353884	8553170	1	102,	0,
#Partially deleted in new
chr7	75359193	75395368	chr7:75359193-75395368	7	+	75359193	75359193	16724991	8	216,86,117,124,99,80,74,396,	0,2180,2778,5439,6061,6370,25889,35779,
#Partially deleted in new
chr7	75361373	75367087	chr7:75361373-75367087	5	+	75361373	75361373	16724991	9	86,117,124,99,80,108,115,110,55,	0,598,3259,3881,4190,4578,4950,5376,5659,
#Partially deleted in new
chr7	75366353	75395383	chr7:75366353-75395383	5	+	75366353	75366353	16724991	2	85,411,	0,28619,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	75381637	75381739	chr7:75381637-75381739	3	+	75381637	75381637	8553170	1	102,	0,
#Partially deleted in new
chr7	75384256	75389882	chr7:75384256-75389882	4	+	75384256	75384256	16724991	3	338,74,161,	0,826,5465,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	75391954	75395434	chr7:75391954-75395434	7	-	75391954	75391954	16724991	5	501,61,90,118,210,	0,1552,2312,3063,3270,
#Partially deleted in new
chr7	75393364	75395281	chr7:75393364-75395281	5	-	75393364	75393364	16724991	4	203,90,118,57,	0,902,1653,1860,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	75395062	75405613	chr7:75395062-75405613	1	+	75399326	75405208	789624	5	441,225,96,231,432,	0,4045,8582,9776,10119,
#Partially deleted in new
chr7	75395160	75399030	chr7:75395160-75399030	0	+	75395160	75395160	8553170	2	343,115,	0,3755,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	75395628	75405613	chr7:75395628-75405613	3	+	75398933	75405208	789624	5	182,417,96,231,432,	0,3287,8016,9210,9553,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	75395755	75410996	chr7:75395755-75410996	1	+	75398933	75410217	789624	7	55,417,96,231,23,108,391,	0,3160,7889,9083,9426,14362,14850,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	75398141	75405605	chr7:75398141-75405605	1	+	75398933	75405208	789624	5	121,417,96,231,421,	0,774,5503,6697,7043,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	75398914	75405605	chr7:75398914-75405605	1	+	75398933	75405208	789624	4	418,96,231,424,	0,4730,5924,6267,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	75401618	75405605	chr7:75401618-75405605	0	+	75401618	75401618	8553170	2	3451,424,	0,3563,
#Partially deleted in new
chr7	75410321	75411539	chr7:75410321-75411539	5	+	75410321	75410321	16724991	3	139,229,132,	0,284,1086,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	75410349	75416786	chr7:75410349-75416786	4	+	75410349	75410349	16724991	6	1225,105,2235,115,600,512,	0,1305,2439,4770,5242,5925,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	75410361	75416787	chr7:75410361-75416787	7	+	75410361	75410361	16724991	8	99,121,105,144,139,115,600,513,	0,244,1293,2427,4523,4758,5230,5913,
#Partially deleted in new
chr7	75410362	75416126	chr7:75410362-75416126	4	+	75410362	75410362	16724991	6	98,121,139,115,187,146,	0,243,4522,4757,5229,5618,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	75410367	75416597	chr7:75410367-75416597	5	+	75410367	75410367	16724991	11	93,121,167,105,144,139,115,187,211,141,112,	0,238,1040,1287,2421,4517,4752,5224,5613,5907,6118,
#Partially deleted in new
chr7	75410394	75416787	chr7:75410394-75416787	5	+	75410394	75410394	16724991	6	66,139,115,50,89,513,	0,4490,4725,5586,5708,5880,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	75411673	75415024	chr7:75411673-75415024	4	+	75411673	75411673	16724991	4	86,144,159,140,	0,1115,2966,3211,
#Deleted in new
chr7	75414479	75416787	chr7:75414479-75416787	5	+	75414479	75414479	16724991	5	544,115,179,211,513,	0,640,1112,1501,1795,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	75416786	75421285	chr7:75416786-75421285	0	-	75416786	75416786	8553170	2	2107,1966,	0,2533,
#Partially deleted in new
chr7	75416789	75486271	chr7:75416789-75486271	3	-	75418795	75441496	789624	15	2104,123,1695,177,103,122,74,92,172,81,162,216,179,127,408,	0,2530,4719,7259,7736,8284,8845,9572,20725,22354,24164,24642,57914,58272,69074,
#Partially deleted in new
chr7	75418795	75442719	chr7:75418795-75442719	1	-	75418795	75442719	789624	13	98,123,1695,177,103,122,74,92,172,81,162,216,575,	0,524,2713,5253,5730,6278,6839,7566,18719,20348,22158,22636,23349,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	75423101	75424809	chr7:75423101-75424809	0	-	75423101	75423101	8553170	3	102,177,284,	0,947,1424,
#Partially deleted in new
chr7	75423169	75437553	chr7:75423169-75437553	0	-	75423169	75423169	8553170	6	34,177,103,122,74,39,	0,879,1356,1904,2465,14345,
#Partially deleted in new
chr7	75425135	75440701	chr7:75425135-75440701	0	-	75425135	75437610	789624	6	60,74,92,172,81,96,	0,499,1226,12379,14008,15470,
#Partially deleted in new
chr7	75425531	75437668	chr7:75425531-75437668	0	-	75425531	75425531	8553170	3	177,92,154,	0,830,11983,
#Partially deleted in new
chr7	75441053	75484328	chr7:75441053-75484328	0	-	75441053	75441496	789624	5	62,216,179,127,131,	0,378,33650,34008,43144,
#Partially deleted in new
chr7	75474706	75486108	chr7:75474706-75486108	7	-	75474706	75474706	16724991	4	92,127,59,245,	0,355,9491,11157,
#Partially deleted in new
chr7	75493624	75502855	chr7:75493624-75502855	3	+	75494047	75501937	789624	8	583,219,231,59,86,394,105,23,	0,1531,3049,4313,5606,7737,8253,9208,
#Partially deleted in new
chr7	75494047	75501937	chr7:75494047-75501937	1	+	75494047	75501937	789624	7	160,219,231,59,86,394,60,	0,1108,2626,3890,5183,7314,7830,
#Partially deleted in new
chr7	75494979	75504304	chr7:75494979-75504304	1	+	75495115	75501937	789624	8	395,231,59,86,115,204,105,1472,	0,1694,2958,4251,6382,6572,6898,7853,
#Partially deleted in new
chr7	75511016	75528088	chr7:75511016-75528088	4	-	75511016	75511016	16724991	7	98,87,135,111,127,103,524,	0,1572,3628,4701,5077,14888,16548,
#Partially deleted in new
chr7	75511016	75527579	chr7:75511016-75527579	4	-	75511016	75511016	16724991	7	98,87,140,111,127,59,15,	0,1572,3628,4701,5077,14888,16548,
#Partially deleted in new
chr7	75512588	75528148	chr7:75512588-75528148	7	-	75512588	75512588	16724991	6	87,140,111,127,59,43,	0,2056,3129,3505,13316,15517,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	75513024	75513126	chr7:75513024-75513126	3	-	75513024	75513024	8553170	1	102,	0,
#Partially deleted in new
chr7	75516042	75525955	chr7:75516042-75525955	4	-	75516042	75516042	16724991	2	178,51,	0,9862,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr7	75533299	75738947	chr7:75533299-75738947	3	-	75538171	75738920	0	31	4925,109,62,124,106,101,94,59,111,137,108,87,136,144,102,117,89,184,73,98,141,76,58,141,62,77,81,57,143,64,147,	0,6023,8619,9551,11395,11788,13639,14455,15591,20153,20813,21140,22116,22726,23410,24354,24867,26432,28029,28773,29635,29888,34899,40461,47937,48775,53453,58756,59072,65884,205501,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr7	75534087	75738941	chr7:75534087-75738941	1	-	75538171	75738920	0	29	4137,109,62,124,106,101,111,137,108,87,136,144,102,117,89,184,73,98,141,76,58,141,62,77,81,57,143,64,141,	0,5235,7831,8763,10607,11000,14803,19365,20025,20352,21328,21938,22622,23566,24079,25644,27241,27985,28847,29100,34111,39673,47149,47987,52665,57968,58284,65096,204713,
#Partially deleted in new
chr7	75538082	75611702	chr7:75538082-75611702	1	-	75538171	75611698	0	31	142,109,62,124,106,101,94,59,111,137,108,87,136,144,102,117,89,184,73,98,141,76,58,141,62,77,81,57,143,64,37,	0,1240,3836,4768,6612,7005,8856,9672,10808,15370,16030,16357,17333,17943,18627,19571,20084,21649,23246,23990,24852,25105,30116,35678,43154,43992,48670,53973,54289,61101,73583,
#Partially deleted in new
chr7	75558221	75563385	chr7:75558221-75563385	0	-	75558221	75558221	8553170	6	34,184,73,98,141,198,	0,1510,3107,3851,4713,4966,
#Partially deleted in new
chr7	75582091	75611843	chr7:75582091-75611843	0	-	75582091	75611698	789624	6	60,81,57,143,64,178,	0,4661,9964,10280,17092,29574,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	75625088	75626970	chr7:75625088-75626970	3	-	75625088	75625088	8553170	1	1882,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	75654412	75738935	chr7:75654412-75738935	0	-	75654412	75654412	8553170	2	284,135,	0,84388,
#Partially deleted in new
chr7	75733459	75738962	chr7:75733459-75738962	0	-	75733459	75733459	8553170	2	341,162,	0,5341,
#Partially deleted in new
chr7	75769532	75772257	chr7:75769532-75772257	1	-	75769692	75772176	0	3	257,115,154,	0,2356,2571,
#Partially deleted in new
chr7	75769532	75789896	chr7:75769532-75789896	3	-	75769692	75772176	0	4	257,115,151,180,	0,2356,2571,20184,
#Partially deleted in new
chr7	75811664	75813806	chr7:75811664-75813806	1	-	75811795	75813715	0	3	300,118,164,	0,1641,1978,
#Partially deleted in new
chr7	75811664	75823356	chr7:75811664-75823356	3	-	75811795	75813715	0	4	300,118,132,35,	0,1641,1978,11657,
#Deleted in new
chr7	75835662	75836141	chr7:75835662-75836141	7	+	75835662	75835662	16724991	1	479,	0,
#Partially deleted in new
chr7	75842601	75882124	chr7:75842601-75882124	2	+	75842601	75842601	8553170	3	148,122,296,	0,38763,39227,
#Partially deleted in new
chr7	75878090	75882165	chr7:75878090-75882165	0	+	75878090	75878090	8553170	3	96,122,337,	0,3274,3738,
#Partially deleted in new
chr7	75878947	75888921	chr7:75878947-75888921	1	+	75879082	75888349	789624	4	313,408,151,930,	0,2881,4750,9044,
#Partially deleted in new
chr7	75878998	75888926	chr7:75878998-75888926	1	+	75882073	75888349	789624	5	262,122,408,151,935,	0,2366,2830,4699,8993,
#Partially deleted in new
chr7	75879003	75888884	chr7:75879003-75888884	0	+	75879082	75881426	789624	5	257,122,408,151,893,	0,2361,2825,4694,8988,
#Deleted in new
chr7	75879139	75880305	chr7:75879139-75880305	0	+	75879139	75879139	8553170	2	121,60,	0,1106,
#Partially deleted in new
chr7	75879171	75888583	chr7:75879171-75888583	0	+	75879171	75879171	8553170	3	89,122,592,	0,2193,8820,
#Partially deleted in new
chr7	75882043	75888921	chr7:75882043-75888921	1	+	75882073	75888349	789624	3	193,151,930,	0,1654,5948,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	75883489	75888268	chr7:75883489-75888268	0	+	75883489	75883489	8553170	2	359,277,	0,4502,
#Partially deleted in new
chr7	75899199	75980393	chr7:75899199-75980393	0	+	75953992	75980393	789624	5	73,192,49,129,55,	0,54789,73213,80251,81139,
#Partially deleted in new
chr7	75907575	75981096	chr7:75907575-75981096	0	+	75953992	75981096	789624	6	56,192,49,129,150,49,	0,46413,64837,71875,72763,73472,
#Partially deleted in new
chr7	75915078	75986855	chr7:75915078-75986855	3	+	75953992	75986481	789624	16	101,192,49,129,150,125,90,99,117,119,182,150,271,146,83,519,	0,38910,57334,64372,65260,65969,66438,67145,68441,68659,69698,69979,70500,70844,71080,71258,
#Partially deleted in new
chr7	75915148	75980738	chr7:75915148-75980738	0	+	75953992	75972530	789624	5	31,192,352,129,400,	0,38840,57264,64302,65190,
#Partially deleted in new
chr7	75915156	75954109	chr7:75915156-75954109	0	+	75953992	75954109	789624	2	510,121,	0,38832,
#Partially deleted in new
chr7	75915156	75979786	chr7:75915156-75979786	0	+	75915156	75915156	8553170	4	23,192,49,336,	0,38832,57256,64294,
#Partially deleted in new
chr7	75915163	75986855	chr7:75915163-75986855	1	+	75953992	75986245	789624	15	16,192,49,129,150,125,90,99,117,119,182,150,271,146,697,	0,38825,57249,64287,65175,65884,66353,67060,68356,68574,69613,69894,70415,70759,70995,
#Partially deleted in new
chr7	75915173	75980411	chr7:75915173-75980411	0	+	75953992	75980411	789624	6	36,107,192,49,129,73,	0,487,38815,57239,64277,65165,
#Partially deleted in new
chr7	75915181	75980488	chr7:75915181-75980488	0	+	75953992	75980488	789624	5	28,192,49,129,150,	0,38807,57231,64269,65157,
#Deleted in new
chr7	75915196	75915269	chr7:75915196-75915269	3	+	75915196	75915196	5263520	1	73,	0,
#Partially deleted in new
chr7	75918643	75980471	chr7:75918643-75980471	0	+	75953992	75980471	789624	5	58,192,49,129,133,	0,35345,53769,60807,61695,
#Partially deleted in new
chr7	75921160	75954180	chr7:75921160-75954180	0	+	75953992	75954180	789624	2	91,192,	0,32828,
#Partially deleted in new
chr7	75922754	75923443	chr7:75922754-75923443	7	+	75922754	75922754	16724991	1	689,	0,
#Deleted in new
chr7	75943781	75943916	chr7:75943781-75943916	3	+	75943781	75943781	789624	1	135,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	75945321	75954180	chr7:75945321-75954180	0	+	75953992	75954180	789624	3	71,473,192,	0,1450,8667,
#Partially deleted in new
chr7	75953988	75986540	chr7:75953988-75986540	0	+	75953992	75983528	789624	10	192,49,129,150,50,61,117,9,83,204,	0,18424,25462,26350,27059,28273,29531,32071,32170,32348,
#Partially deleted in new
chr7	75953988	75986854	chr7:75953988-75986854	0	+	75953992	75981570	789624	14	192,49,129,150,90,99,117,119,182,150,271,146,83,518,	0,18424,25462,26350,27528,28235,29531,29749,30788,31069,31590,31934,32170,32348,
#Partially deleted in new
chr7	75954075	75986599	chr7:75954075-75986599	0	+	75954075	75986443	789624	15	105,49,129,384,125,90,99,117,119,182,150,271,146,83,283,	0,18337,25375,26263,26972,27441,28148,29444,29662,30701,30982,31503,31847,32083,32241,
#Partially deleted in new
chr7	75967842	75980439	chr7:75967842-75980439	0	+	75968081	75980439	789624	4	286,49,129,101,	0,4570,11608,12496,
#Partially deleted in new
chr7	75967844	75979537	chr7:75967844-75979537	0	+	75968250	75979537	789624	3	433,49,87,	0,4568,11606,
#Partially deleted in new
chr7	75980931	75983793	chr7:75980931-75983793	0	+	75980931	75980931	8553170	5	241,90,99,117,56,	0,585,1292,2588,2806,
#Partially deleted in new
chr7	75981910	75986832	chr7:75981910-75986832	1	+	75982278	75986481	789624	10	195,99,117,119,182,150,271,146,83,496,	0,313,1609,1827,2866,3147,3668,4012,4248,4426,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	75983315	75985745	chr7:75983315-75985745	0	+	75983315	75983315	8553170	5	321,119,182,150,167,	0,422,1461,1742,2263,
#Deleted in new
chr7	75983435	75985307	chr7:75983435-75985307	0	+	75983435	75983435	8553170	3	421,182,250,	0,1341,1622,
#Deleted in new
chr7	75983788	75985366	chr7:75983788-75985366	0	+	75983788	75983788	8553170	3	68,182,309,	0,988,1269,
#Deleted in new
chr7	75985569	75986855	chr7:75985569-75986855	0	+	75985569	75985569	8553170	4	280,146,83,519,	0,353,589,767,
#Partially deleted in new
chr7	75986836	75994659	chr7:75986836-75994659	3	-	75987171	75994570	789624	12	449,69,65,93,62,66,90,96,60,117,119,170,	0,523,701,881,1086,1246,1415,1584,2328,5307,5602,7653,
#Partially deleted in new
chr7	75986982	75994616	chr7:75986982-75994616	1	-	75987411	75994570	789624	10	446,65,93,62,259,96,60,117,119,127,	0,555,735,940,1100,1438,2182,5161,5456,7507,
#Partially deleted in new
chr7	75986984	75994574	chr7:75986984-75994574	1	-	75987031	75994570	789624	12	239,69,65,93,62,66,90,96,60,117,119,85,	0,375,553,733,938,1098,1267,1436,2180,5159,5454,7505,
#Deleted in new
chr7	75986984	75987668	chr7:75986984-75987668	0	-	75986984	75986984	8553170	2	301,309,	0,375,
#Deleted in new
chr7	75986984	75988320	chr7:75986984-75988320	0	-	75987411	75988320	789624	6	301,69,93,62,66,69,	0,375,733,938,1098,1267,
#Deleted in new
chr7	75986988	75988211	chr7:75986988-75988211	0	-	75987403	75988211	789624	5	297,60,93,62,129,	0,371,729,934,1094,
#Deleted in new
chr7	75986991	75987535	chr7:75986991-75987535	0	-	75986991	75986991	8553170	2	232,176,	0,368,
#Partially deleted in new
chr7	75987040	75994656	chr7:75987040-75994656	0	-	75987411	75994570	789624	11	245,69,65,93,62,259,96,60,117,119,167,	0,319,497,677,882,1042,1380,2124,5103,5398,7449,
#Deleted in new
chr7	75987149	75989178	chr7:75987149-75989178	0	-	75987224	75989178	789624	8	279,65,93,62,66,90,96,14,	0,388,568,773,933,1102,1271,2015,
#Deleted in new
chr7	75987441	75987978	chr7:75987441-75987978	0	-	75987441	75987441	8553170	2	369,56,	0,481,
#Partially deleted in new
chr7	75987541	75994556	chr7:75987541-75994556	0	-	75987541	75987541	8553170	8	61,93,259,96,60,117,119,67,	0,176,541,879,1623,4602,4897,6948,
#Partially deleted in new
chr7	75987926	75992282	chr7:75987926-75992282	0	-	75987926	75987926	8553170	6	58,66,90,96,60,139,	0,156,325,494,1238,4217,
#Partially deleted in new
chr7	75988035	75992527	chr7:75988035-75992527	0	-	75988035	75988035	8553170	5	306,96,60,117,89,	0,385,1129,4108,4403,
#Partially deleted in new
chr7	75988129	75994638	chr7:75988129-75994638	0	-	75988129	75994570	789624	6	19,90,96,117,119,149,	0,122,291,4014,4309,6360,
#Deleted in new
chr7	75988202	75988587	chr7:75988202-75988587	0	-	75988202	75988202	8553170	2	139,167,	0,218,
#Partially deleted in new
chr7	75996337	76048003	chr7:75996337-76048003	3	-	75996467	76030523	789624	9	262,113,98,146,146,142,62,104,342,	0,4552,7420,8921,17404,25513,32304,34083,51324,
#Partially deleted in new
chr7	75996337	76048003	chr7:75996337-76048003	1	-	75996467	76030523	789624	7	262,113,98,146,62,104,342,	0,4552,7420,8921,32304,34083,51324,
#Partially deleted in new
chr7	75996341	76047983	chr7:75996341-76047983	1	-	75996467	76030523	789624	7	258,113,98,146,62,104,172,	0,4548,7416,8917,32300,34079,51470,
#Partially deleted in new
chr7	75996341	76047963	chr7:75996341-76047963	1	-	75996467	76030523	789624	9	258,113,98,146,146,142,62,107,302,	0,4548,7416,8917,17400,25509,32300,34079,51320,
#Partially deleted in new
chr7	75996365	76028672	chr7:75996365-76028672	0	-	76005372	76028672	789624	5	234,98,146,142,31,	0,7392,8893,25485,32276,
#Partially deleted in new
chr7	75996365	76028672	chr7:75996365-76028672	0	-	76005372	76028672	789624	6	234,113,98,146,142,31,	0,4524,7392,8893,25485,32276,
#Partially deleted in new
chr7	75996408	76047953	chr7:75996408-76047953	1	-	75996467	76030523	789624	9	191,113,98,146,146,142,62,107,142,	0,4481,7349,8850,17333,25442,32233,34012,51403,
#Partially deleted in new
chr7	75996498	76028671	chr7:75996498-76028671	0	-	75996498	76028671	789624	6	101,98,146,146,142,30,	0,7259,8760,17243,25352,32143,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	75998544	76047980	chr7:75998544-76047980	1	-	75999095	76030523	789624	9	590,113,98,146,146,142,62,104,169,	0,2345,5213,6714,15197,23306,30097,31876,49267,
#Partially deleted in new
chr7	76003738	76047988	chr7:76003738-76047988	0	-	76003738	76003738	8553170	5	117,146,62,104,177,	0,1520,24903,26682,44073,
#Partially deleted in new
chr7	76013752	76048004	chr7:76013752-76048004	0	-	76013752	76013752	8553170	5	135,142,62,104,193,	0,8098,14889,16668,34059,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	76043976	76045963	chr7:76043976-76045963	3	-	76043976	76043976	8553170	1	1987,	0,
#Deleted in new
chr7	76048050	76049047	chr7:76048050-76049047	1	+	76048160	76048596	789624	2	176,472,	0,525,
#Partially deleted in new
chr7	76048066	76067508	chr7:76048066-76067508	3	+	76048160	76066410	0	9	160,169,84,110,126,78,100,152,1230,	0,6763,9343,9902,12306,15448,16272,16735,18212,
#Partially deleted in new
chr7	76048084	76067506	chr7:76048084-76067506	1	+	76057970	76066410	789624	8	142,84,110,126,78,100,152,1228,	0,9325,9884,12288,15430,16254,16717,18194,
#Partially deleted in new
chr7	76048135	76058175	chr7:76048135-76058175	0	+	76048135	76048135	8553170	4	91,169,84,207,	0,6694,9274,9833,
#Partially deleted in new
chr7	76048160	76067067	chr7:76048160-76067067	1	+	76048160	76066410	0	8	66,169,84,110,78,100,152,789,	0,6669,9249,9808,15354,16178,16641,18118,
#Partially deleted in new
chr7	76048160	76057447	chr7:76048160-76057447	0	+	76048160	76048160	8553170	3	362,169,38,	0,6669,9249,
#Partially deleted in new
chr7	76054503	76057460	chr7:76054503-76057460	0	+	76054503	76054503	8553170	2	495,51,	0,2906,
#Partially deleted in new
chr7	76060367	76065173	chr7:76060367-76065173	0	+	76060367	76060367	8553170	4	131,78,100,372,	0,3147,3971,4434,
#Deleted in new
chr7	76071468	76074963	chr7:76071468-76074963	7	-	76071468	76071468	16724991	1	3495,	0,
#Partially deleted in new
chr7	76087443	76087547	chr7:76087443-76087547	3	+	76087443	76087443	8553170	1	104,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	76090430	76108779	chr7:76090430-76108779	7	-	76090430	76090430	16724991	6	1736,105,75,59,79,345,	0,2866,9009,9467,17800,18004,
#Partially deleted in new
chr7	76099439	76101408	chr7:76099439-76101408	5	-	76099439	76099439	16724991	3	75,59,175,	0,458,1794,
#Partially deleted in new
chr7	76108433	76132187	chr7:76108433-76132187	7	-	76108433	76108433	16724991	5	39,86,202,163,200,	0,243,9251,20186,23554,
#Deleted in new
chr7	76113025	76113400	chr7:76113025-76113400	7	-	76113025	76113025	16724991	1	375,	0,
#Partially deleted in new
chr7	76173732	76175573	chr7:76173732-76175573	5	+	76173732	76173732	16724991	3	44,75,94,	0,554,1747,
#Partially deleted in new
chr7	76174308	76177205	chr7:76174308-76177205	7	+	76174308	76174308	16724991	3	57,90,153,	0,1172,2744,
#Partially deleted in new
chr7	76201899	76287286	chr7:76201899-76287286	3	+	76235066	76285843	789624	15	168,272,102,129,81,30,63,36,51,105,178,362,225,138,1672,	0,33128,46288,58006,58217,58974,59452,59646,62865,63464,65358,79541,80748,81064,83715,
#Partially deleted in new
chr7	76234981	76260034	chr7:76234981-76260034	0	+	76234981	76234981	8553170	3	318,102,129,	0,13206,24924,
#Partially deleted in new
chr7	76265406	76269992	chr7:76265406-76269992	0	+	76265406	76267525	789624	2	62,2735,	0,1851,
#Partially deleted in new
chr7	76273052	76281486	chr7:76273052-76281486	0	+	76273052	76273052	8553170	2	543,46,	0,8388,
#Partially deleted in new
chr7	76282613	76287288	chr7:76282613-76287288	0	+	76282613	76282613	8553170	4	259,138,79,1674,	0,350,910,3001,
#Partially deleted in new
chr7	76302543	76304295	chr7:76302543-76304295	3	+	76302712	76304173	0	3	533,64,312,	0,1258,1440,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	76302687	76304260	chr7:76302687-76304260	0	+	76302712	76303273	789624	2	1178,277,	0,1296,
#Deleted in new
chr7	76303576	76304295	chr7:76303576-76304295	1	+	76304059	76304173	789624	3	151,64,312,	0,225,407,
#Partially deleted in new
chr7	76326793	76359031	chr7:76326793-76359031	3	-	76329576	76358808	0	2	3440,310,	0,31928,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	76361767	76362113	chr7:76361767-76362113	7	+	76361767	76361767	16724991	1	346,	0,
#Partially deleted in new
chr7	76389333	76409695	chr7:76389333-76409695	3	-	76390058	76404439	789624	11	1042,78,312,75,78,315,78,306,36,199,282,	0,2630,4071,4496,5919,8184,9386,10952,11674,14973,20080,
#Partially deleted in new
chr7	76389333	76393490	chr7:76389333-76393490	0	-	76389333	76389333	8553170	3	1042,78,104,	0,2630,4053,
#Partially deleted in new
chr7	76397517	76442071	chr7:76397517-76442071	3	+	76425117	76442056	789624	9	280,225,119,104,178,118,92,137,230,	0,27534,31997,35409,35952,36520,42732,42957,44324,
#Partially deleted in new
chr7	76424906	76442071	chr7:76424906-76442071	1	+	76424964	76442056	789624	8	370,119,104,178,118,92,137,230,	0,4608,8020,8563,9131,15343,15568,16935,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	76428637	76442062	chr7:76428637-76442062	1	+	76433023	76442056	789624	7	996,104,178,118,92,137,221,	0,4289,4832,5400,11612,11837,13204,
#Partially deleted in new
chr7	76433469	76442063	chr7:76433469-76442063	0	+	76433469	76442056	789624	5	178,118,92,173,222,	0,568,6780,6969,8372,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	76433955	76442071	chr7:76433955-76442071	0	+	76433955	76433955	8553170	4	200,92,137,230,	0,6294,6519,7886,
#Partially deleted in new
chr7	76434034	76442071	chr7:76434034-76442071	0	+	76434034	76434034	8553170	2	121,230,	0,7807,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	76439897	76442071	chr7:76439897-76442071	0	+	76439897	76439897	8553170	4	93,92,137,230,	0,352,577,1944,
#Partially deleted in new
chr7	76461675	76480704	chr7:76461675-76480704	0	+	76480509	76480704	789624	4	161,56,65,284,	0,1978,15438,18745,
#Partially deleted in new
chr7	76461696	76480594	chr7:76461696-76480594	0	+	76480509	76480594	789624	3	140,236,174,	0,15246,18724,
#Partially deleted in new
chr7	76461696	76480584	chr7:76461696-76480584	0	+	76480509	76480584	789624	3	140,265,164,	0,1748,18724,
#Partially deleted in new
chr7	76461700	76505991	chr7:76461700-76505991	3	+	76480509	76505601	789624	12	136,165,120,357,640,101,141,80,159,162,90,618,	0,1844,8599,18720,20807,30452,35636,38740,40597,41725,42655,43673,
#Partially deleted in new
chr7	76461708	76505988	chr7:76461708-76505988	1	+	76482512	76505601	789624	10	128,165,640,101,141,80,159,162,90,615,	0,1836,20799,30444,35628,38732,40589,41717,42647,43665,
#Partially deleted in new
chr7	76461708	76480695	chr7:76461708-76480695	0	+	76480509	76480695	789624	4	128,165,65,275,	0,1836,15405,18712,
#Partially deleted in new
chr7	76461708	76480447	chr7:76461708-76480447	0	+	76461708	76461708	8553170	4	128,165,236,27,	0,1836,15234,18712,
#Partially deleted in new
chr7	76461715	76505994	chr7:76461715-76505994	1	+	76480509	76505601	789624	10	121,357,640,101,141,80,159,162,90,621,	0,18705,20792,30437,35621,38725,40582,41710,42640,43658,
#Partially deleted in new
chr7	76461716	76482659	chr7:76461716-76482659	0	+	76480509	76482659	789624	5	120,165,65,357,152,	0,1828,15397,18704,20791,
#Partially deleted in new
chr7	76461719	76480778	chr7:76461719-76480778	0	+	76480509	76480778	789624	3	117,65,358,	0,15394,18701,
#Partially deleted in new
chr7	76461726	76505991	chr7:76461726-76505991	1	+	76480509	76505601	789624	11	110,165,357,640,101,141,80,159,162,90,618,	0,1818,18694,20781,30426,35610,38714,40571,41699,42629,43647,
#Partially deleted in new
chr7	76462457	76480551	chr7:76462457-76480551	0	+	76480509	76480551	789624	4	154,165,120,131,	0,1087,7842,17963,
#Deleted in new
chr7	76470161	76471058	chr7:76470161-76471058	7	-	76470161	76470161	16724991	1	897,	0,
#Partially deleted in new
chr7	76472061	76482563	chr7:76472061-76482563	0	+	76480509	76482563	789624	4	61,65,357,56,	0,5052,8359,10446,
#Partially deleted in new
chr7	76474586	76478856	chr7:76474586-76478856	3	-	76474586	76474586	8553170	2	362,91,	0,4179,
#Partially deleted in new
chr7	76478126	76480778	chr7:76478126-76480778	0	+	76480509	76480778	789624	2	76,358,	0,2294,
#Partially deleted in new
chr7	76478974	76482615	chr7:76478974-76482615	0	+	76478974	76478974	8553170	3	146,357,108,	0,1446,3533,
#Partially deleted in new
chr7	76480509	76505643	chr7:76480509-76505643	1	+	76480509	76505601	789624	8	268,640,101,80,159,162,90,270,	0,1998,11643,19931,21788,22916,23846,24864,
#Partially deleted in new
chr7	76491996	76502456	chr7:76491996-76502456	0	+	76491996	76491996	8553170	3	257,80,159,	0,8444,10301,
#Partially deleted in new
chr7	76492152	76502989	chr7:76492152-76502989	0	+	76492152	76502352	789624	5	101,80,26,159,181,	0,8288,9114,10145,10656,
#Partially deleted in new
chr7	76499801	76505995	chr7:76499801-76505995	0	+	76499801	76499801	8553170	5	719,159,162,90,622,	0,2496,3624,4554,5572,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	76501888	76505991	chr7:76501888-76505991	0	+	76501888	76501888	8553170	4	568,162,90,618,	0,1537,2467,3485,
#Deleted in new
chr7	76503366	76505838	chr7:76503366-76505838	0	+	76503366	76503366	8553170	3	221,90,465,	0,989,2007,
#Partially deleted in new
chr7	76510427	76516521	chr7:76510427-76516521	1	+	76510652	76515204	789624	6	310,150,226,80,130,1477,	0,475,1229,2656,3519,4617,
#Partially deleted in new
chr7	76510524	76515456	chr7:76510524-76515456	3	+	76510652	76515251	789624	4	528,226,130,412,	0,1132,3422,4520,
#Partially deleted in new
chr7	76510614	76515456	chr7:76510614-76515456	1	+	76510652	76515251	789624	5	123,150,226,130,412,	0,288,1042,3332,4430,
#Partially deleted in new
chr7	76510754	76511882	chr7:76510754-76511882	0	+	76510754	76510754	8553170	2	298,226,	0,902,
#Partially deleted in new
chr7	76511534	76514048	chr7:76511534-76514048	0	+	76511534	76511534	8553170	3	348,80,102,	0,1549,2412,
#Partially deleted in new
chr7	76521610	76522074	chr7:76521610-76522074	7	+	76521610	76521610	16724991	2	67,136,	0,328,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	76523604	76523706	chr7:76523604-76523706	3	+	76523604	76523604	8553170	1	102,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	76531318	76541459	chr7:76531318-76541459	3	-	76533693	76541459	789624	7	2435,244,86,59,231,219,160,	0,2557,4853,6174,7267,8809,9981,
#Partially deleted in new
chr7	76531324	76540523	chr7:76531324-76540523	1	-	76533693	76540386	789624	7	1470,105,244,86,59,231,396,	0,2324,2551,4847,6168,7261,8803,
#Partially deleted in new
chr7	76533693	76540386	chr7:76533693-76540386	1	-	76533693	76540386	789624	7	60,100,63,86,59,231,259,	0,182,363,2478,3799,4892,6434,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	76549359	76627982	chr7:76549359-76627982	7	+	76549359	76549359	16724991	3	502,103,2062,	0,2060,76561,
#Partially deleted in new
chr7	76549360	76626278	chr7:76549360-76626278	4	+	76549360	76549360	16724991	3	501,103,358,	0,2059,76560,
#Partially deleted in new
chr7	76549410	76621388	chr7:76549410-76621388	4	+	76549410	76549410	16724991	4	246,59,170,273,	0,2053,66083,71705,
#Partially deleted in new
chr7	76549617	76551520	chr7:76549617-76551520	5	+	76549617	76549617	16724991	2	241,58,	0,1845,
#Partially deleted in new
chr7	76609985	76627240	chr7:76609985-76627240	1	-	76610212	76626064	789624	5	230,118,162,216,533,	0,8197,15536,16014,16722,
#Partially deleted in new
chr7	76609985	76627241	chr7:76609985-76627241	3	-	76611464	76626064	789624	7	230,138,92,118,162,216,534,	0,1468,1736,8197,15536,16014,16722,
#Partially deleted in new
chr7	76609993	76618300	chr7:76609993-76618300	0	-	76611464	76618300	789624	4	222,174,92,118,	0,1460,1728,8189,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	76610027	76627261	chr7:76610027-76627261	0	-	76611812	76626064	789624	8	188,138,92,118,119,162,216,554,	0,1426,1694,8155,8469,15494,15972,16680,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	76611721	76626127	chr7:76611721-76626127	0	-	76611721	76626064	789624	4	92,433,162,128,	0,6461,13800,14278,
#Deleted in new
chr7	76650400	76650897	chr7:76650400-76650897	7	-	76650400	76650400	16724991	1	497,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	76818376	76903041	chr7:76818376-76903041	3	-	76818376	76818376	8553170	8	84,52,164,128,210,43,154,320,	0,860,49452,51503,53052,56871,77522,84345,
#Partially deleted in new
chr7	76902490	76911218	chr7:76902490-76911218	3	+	76902490	76902490	8553170	2	622,114,	0,8614,
#Partially deleted in new
chr7	76911104	76919191	chr7:76911104-76919191	1	+	76911104	76911104	8553170	2	222,127,	0,7960,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	76959834	77025733	chr7:76959834-77025733	3	+	76959834	76959834	8553170	15	115,165,349,640,101,80,159,90,226,81,140,87,184,89,2140,	0,1822,18693,20786,30434,40474,42328,44383,45715,47144,52045,54077,55837,59074,63759,
#Partially deleted in new
chr7	76960570	76978658	chr7:76960570-76978658	3	+	76960570	76960570	8553170	4	154,165,120,131,	0,1086,7828,17957,
#Deleted in new
chr7	76968196	76969250	chr7:76968196-76969250	7	-	76968196	76968196	16724991	1	1054,	0,
#Deleted in new
chr7	76968345	76968518	chr7:76968345-76968518	7	+	76968345	76968345	16724991	1	173,	0,
#Partially deleted in new
chr7	76972678	76976961	chr7:76972678-76976961	3	-	76972678	76972678	8553170	2	362,91,	0,4192,
#Partially deleted in new
chr7	76978616	77004308	chr7:76978616-77004308	7	+	76978616	76978616	16724991	8	260,640,101,141,80,159,161,91,	0,2004,11652,16838,21692,23546,24672,25601,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	76980948	77023761	chr7:76980948-77023761	0	+	76980948	76980948	789624	11	312,101,80,159,90,226,140,87,184,89,168,	0,9320,19360,21214,23269,24601,30931,32963,34723,37960,42645,
#Partially deleted in new
chr7	76981101	77043775	chr7:76981101-77043775	0	+	76981101	76981101	8553170	9	159,101,80,159,90,226,139,87,181,	0,9167,19207,21061,23116,24448,58849,60875,62493,
#Deleted in new
chr7	77004661	77005774	chr7:77004661-77005774	7	+	77004661	77004661	16724991	2	283,226,	0,887,
#Partially deleted in new
chr7	77011550	77015853	chr7:77011550-77015853	7	+	77011550	77011550	16724991	5	67,136,88,99,184,	0,330,2360,2624,4119,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	77013582	77013684	chr7:77013582-77013684	3	+	77013582	77013582	8553170	1	102,	0,
#Partially deleted in new
chr7	77024690	77030572	chr7:77024690-77030572	7	-	77024690	77024690	16724991	6	52,244,85,58,217,127,	0,178,2139,3453,4545,5755,
#Partially deleted in new
chr7	77039943	77043776	chr7:77039943-77043776	7	+	77039943	77039943	16724991	4	144,88,99,184,	0,2032,2296,3649,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	77041646	77041748	chr7:77041646-77041748	3	+	77041646	77041646	8553170	1	102,	0,
#Partially deleted in new
chr7	77043720	77198626	chr7:77043720-77198626	3	+	77043720	77043720	8553170	3	58,167,392,	0,123937,154514,
#Partially deleted in new
chr7	77052784	77060512	chr7:77052784-77060512	7	-	77052784	77052784	16724991	7	53,244,86,59,234,214,160,	0,175,2451,3765,4852,6400,7568,
#Deleted in new
chr7	77071750	77072237	chr7:77071750-77072237	7	-	77071750	77071750	16724991	1	487,	0,
#Partially deleted in new
chr7	77083885	77122116	chr7:77083885-77122116	5	-	77083885	77083885	16724991	7	136,96,42,139,93,110,451,	0,10116,15024,26052,29505,35631,37780,
#Deleted in new
chr7	77115398	77116192	chr7:77115398-77116192	7	-	77115398	77115398	16724991	1	794,	0,
#Partially deleted in new
chr7	77122433	77254567	chr7:77122433-77254567	0	+	77167668	77254567	789624	5	35,167,83,210,62,	0,45224,114513,119257,132072,
#Partially deleted in new
chr7	77122616	77295204	chr7:77122616-77295204	3	+	77167668	77294866	789624	19	116,167,83,210,58,177,74,228,187,96,171,89,165,225,229,129,138,249,542,	0,45041,114330,119074,131889,133716,136378,137392,139504,151077,151865,156135,156320,157812,159940,164181,164823,170335,172046,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	77193370	77199826	chr7:77193370-77199826	3	-	77196278	77199793	789624	2	3615,646,	0,5810,
#Deleted in new
chr7	77198859	77199848	chr7:77198859-77199848	1	-	77199115	77199793	789624	1	989,	0,
#Partially deleted in new
chr7	77242345	77259289	chr7:77242345-77259289	0	+	77242345	77242345	8553170	4	85,58,177,295,	0,12160,13987,16649,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	77246339	77258123	chr7:77246339-77258123	3	-	77246339	77246339	8553170	4	148,150,55,217,	0,8986,10861,11567,
#Partially deleted in new
chr7	77259967	77295216	chr7:77259967-77295216	0	+	77259967	77259967	8553170	11	269,187,171,89,165,225,229,129,138,249,554,	0,2153,14514,18784,18969,20461,22589,26830,27472,32984,34695,
#Partially deleted in new
chr7	77282298	77295213	chr7:77282298-77295213	0	+	77282298	77282298	8553170	5	487,129,138,249,551,	0,4499,5141,10653,12364,
#Partially deleted in new
chr7	77282510	77293200	chr7:77282510-77293200	0	+	77282510	77282510	8553170	4	275,58,138,249,	0,4287,4929,10441,
#Partially deleted in new
chr7	77282591	77287170	chr7:77282591-77287170	0	+	77282591	77282591	8553170	2	194,373,	0,4206,
#Partially deleted in new
chr7	77287353	77294915	chr7:77287353-77294915	0	+	77287353	77287353	8553170	3	224,249,253,	0,5598,7309,
#Partially deleted in new
chr7	77293052	77329533	chr7:77293052-77329533	0	+	77293052	77293052	8553170	3	148,276,138,	0,1610,36343,
#Partially deleted in new
chr7	77310750	77416400	chr7:77310750-77416400	3	-	77311357	77416321	789624	31	699,100,102,62,120,95,71,96,62,32,59,129,54,83,70,218,93,78,78,86,44,60,105,50,70,89,54,70,57,77,188,	0,1090,1350,2737,3619,9974,10582,12896,15461,17855,18582,19488,38600,42193,42821,44462,44804,50073,51832,63319,64307,66097,66535,70554,71823,76609,86231,86595,93808,95278,105462,
#Partially deleted in new
chr7	77310750	77355630	chr7:77310750-77355630	0	-	77310750	77310750	8553170	16	699,100,102,62,120,95,71,96,62,32,1035,54,83,70,218,76,	0,1090,1350,2737,3619,9974,10582,12896,15461,17855,18582,38600,42193,42821,44462,44804,
#Partially deleted in new
chr7	77310750	77327484	chr7:77310750-77327484	0	-	77310750	77310750	8553170	9	699,100,102,62,120,95,71,96,1273,	0,1090,1350,2737,3619,9974,10582,12896,15461,
#Partially deleted in new
chr7	77310751	77316314	chr7:77310751-77316314	0	-	77310751	77310751	8553170	3	1451,62,1945,	0,2736,3618,
#Partially deleted in new
chr7	77311322	77326246	chr7:77311322-77326246	1	-	77311357	77320776	789624	8	127,100,102,62,120,95,96,35,	0,518,778,2165,3047,9402,12324,14889,
#Partially deleted in new
chr7	77311334	77314815	chr7:77311334-77314815	0	-	77311334	77311334	8553170	5	115,100,102,62,446,	0,506,766,2153,3035,
#Partially deleted in new
chr7	77312165	77331944	chr7:77312165-77331944	0	-	77312165	77312165	8553170	9	37,62,120,95,71,96,62,186,137,	0,1322,2204,8559,9167,11481,14046,18016,19642,
#Partially deleted in new
chr7	77314373	77330367	chr7:77314373-77330367	0	-	77314373	77330367	789624	7	116,95,71,62,32,59,129,	0,6351,6959,11838,14232,14959,15865,
#Partially deleted in new
chr7	77321338	77328485	chr7:77321338-77328485	0	-	77321338	77321338	8553170	4	65,96,62,320,	0,2308,4873,6827,
#Deleted in new
chr7	77328614	77330718	chr7:77328614-77330718	0	-	77328614	77328614	8553170	3	23,59,480,	0,718,1624,
#Partially deleted in new
chr7	77329526	77406105	chr7:77329526-77406105	0	-	77329526	77329526	8553170	19	841,54,83,70,218,93,78,78,86,44,60,105,50,70,89,54,70,57,77,	0,19824,23417,24045,25686,26028,31297,33056,44543,45531,47321,47759,51778,53047,57833,67455,67819,75032,76502,
#Partially deleted in new
chr7	77351596	77355284	chr7:77351596-77355284	0	-	77351596	77351596	8553170	4	93,83,124,72,	0,1347,1975,3616,
#Partially deleted in new
chr7	77397000	77415867	chr7:77397000-77415867	1	-	77397023	77406066	789624	5	35,70,57,77,361,	0,345,7558,9028,18506,
#Deleted in new
chr7	77461457	77462139	chr7:77461457-77462139	7	+	77461457	77461457	16724991	1	682,	0,
#Partially deleted in new
chr7	77537274	77640071	chr7:77537274-77640071	3	+	77537546	77639280	0	18	371,109,77,96,39,72,60,143,67,78,99,86,971,78,68,31,108,853,	0,33803,44152,46280,48268,54910,60567,63389,69960,73490,73673,81205,89430,95073,98507,99743,101349,101944,
#Partially deleted in new
chr7	77537516	77583821	chr7:77537516-77583821	0	+	77537516	77537516	8553170	4	129,109,77,267,	0,33561,43910,46038,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	77537553	77581465	chr7:77537553-77581465	0	+	77537553	77563974	789624	4	92,260,109,39,	0,26382,33524,43873,
#Partially deleted in new
chr7	77538028	77592256	chr7:77538028-77592256	0	+	77583626	77592256	789624	7	78,81,109,77,96,39,72,	0,736,33049,43398,45526,47514,54156,
#Partially deleted in new
chr7	77538034	77639280	chr7:77538034-77639280	1	+	77583626	77639280	0	18	72,109,77,96,39,72,60,143,67,78,99,86,971,78,68,31,108,62,	0,33043,43392,45520,47508,54150,59807,62629,69200,72730,72913,80445,88670,94313,97747,98983,100589,101184,
#Partially deleted in new
chr7	77538068	77639620	chr7:77538068-77639620	1	+	77585551	77639280	0	17	38,109,77,39,72,60,143,67,78,99,86,971,78,68,31,108,402,	0,33009,43358,47474,54116,59773,62595,69166,72696,72879,80411,88636,94279,97713,98949,100555,101150,
#Partially deleted in new
chr7	77545751	77600728	chr7:77545751-77600728	0	+	77583626	77600728	789624	8	46,109,77,96,39,72,60,65,	0,25326,35675,37803,39791,46433,52090,54912,
#Partially deleted in new
chr7	77571090	77610828	chr7:77571090-77610828	0	+	77571090	77610828	789624	8	96,77,96,39,60,143,67,64,	0,10336,12464,14452,26751,29573,36144,39674,
#Partially deleted in new
chr7	77571152	77585571	chr7:77571152-77585571	0	+	77583626	77585571	789624	3	34,96,29,	0,12402,14390,
#Partially deleted in new
chr7	77583554	77610802	chr7:77583554-77610802	0	+	77583626	77604882	789624	8	96,39,72,60,143,57,67,38,	0,1988,8630,14287,17109,21324,23680,27210,
#Partially deleted in new
chr7	77585148	77592381	chr7:77585148-77592381	0	+	77585148	77585148	8553170	2	433,197,	0,7036,
#Partially deleted in new
chr7	77585545	77600965	chr7:77585545-77600965	0	+	77585545	77585545	8553170	4	36,72,60,302,	0,6639,12296,15118,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	77606927	77611046	chr7:77606927-77611046	0	+	77606927	77606927	8553170	3	374,78,99,	0,3837,4020,
#Partially deleted in new
chr7	77627155	77638708	chr7:77627155-77638708	0	+	77627155	77638708	789624	4	520,68,31,85,	0,8626,9862,11468,
#Partially deleted in new
chr7	77636764	77639490	chr7:77636764-77639490	0	+	77636764	77636764	8553170	3	284,108,272,	0,1859,2454,
#Partially deleted in new
chr7	77636971	77638941	chr7:77636971-77638941	0	+	77636971	77636971	8553170	2	77,318,	0,1652,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	77657659	77696265	chr7:77657659-77696265	3	-	77657659	77657659	789624	2	1659,370,	0,38236,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	77659092	77696265	chr7:77659092-77696265	1	-	77659092	77659092	789624	4	226,136,127,94,	0,2105,26109,37079,
#Partially deleted in new
chr7	77683942	77696262	chr7:77683942-77696262	0	-	77683942	77683942	8553170	3	391,127,91,	0,1259,12229,
#Partially deleted in new
chr7	77684220	77696265	chr7:77684220-77696265	0	-	77684220	77684220	8553170	3	31,127,370,	0,981,11675,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	77684784	77696253	chr7:77684784-77696253	1	-	77684784	77684784	8553170	2	544,358,	0,11111,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	77696442	77783022	chr7:77696442-77783022	3	+	77696469	77779168	789624	8	613,117,641,138,143,168,109,4493,	0,39967,52981,69052,72218,76704,81895,82087,
#Partially deleted in new
chr7	77697150	77779682	chr7:77697150-77779682	1	+	77749530	77779168	789624	8	198,117,641,138,143,168,109,1153,	0,39259,52273,68344,71510,75996,81187,81379,
#Partially deleted in new
chr7	77759594	77778611	chr7:77759594-77778611	0	+	77765536	77778611	789624	6	144,138,143,168,109,82,	0,5900,9066,13552,18743,18935,
#Partially deleted in new
chr7	77765490	77773446	chr7:77765490-77773446	0	+	77765490	77765490	8553170	3	142,143,300,	0,3170,7656,
#Partially deleted in new
chr7	77768354	77773353	chr7:77768354-77773353	0	+	77768354	77768354	8553170	2	449,207,	0,4792,
#Partially deleted in new
chr7	77768660	77778818	chr7:77768660-77778818	0	+	77768660	77778747	789624	4	143,168,109,185,	0,4486,9677,9973,
#Partially deleted in new
chr7	77793727	77798580	chr7:77793727-77798580	3	-	77793971	77794373	789624	2	696,327,	0,4526,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr7	77798791	77957503	chr7:77798791-77957503	1	+	77840255	77954878	789624	20	180,80,102,57,12,70,159,166,165,187,156,219,129,273,132,87,156,96,126,2646,	0,41429,55941,94816,95190,101919,102970,110001,111453,121487,123831,130317,138918,141238,141736,143908,150886,152825,154977,156066,
#Partially deleted in new
chr7	77798804	77957225	chr7:77798804-77957225	1	+	77840255	77954878	789624	18	167,80,57,70,159,166,165,187,156,219,129,273,132,87,156,96,126,2368,	0,41416,94803,101906,102957,109988,111440,121474,123818,130304,138905,141225,141723,143895,150873,152812,154964,156053,
#Partially deleted in new
chr7	77798804	77955945	chr7:77798804-77955945	3	+	77840255	77954878	789624	19	167,80,57,12,70,159,166,165,187,156,219,129,273,132,87,156,96,126,1088,	0,41416,94803,95177,101906,102957,109988,111440,121474,123818,130304,138905,141225,141723,143895,150873,152812,154964,156053,
#Partially deleted in new
chr7	77798812	77940459	chr7:77798812-77940459	1	+	77840255	77940317	789624	12	159,80,57,70,159,166,165,187,156,219,129,430,	0,41408,94795,101898,102949,109980,111432,121466,123810,130296,138897,141217,
#Partially deleted in new
chr7	77798887	77923392	chr7:77798887-77923392	1	+	77840255	77922832	789624	9	84,80,57,70,159,166,165,187,770,	0,41333,94720,101823,102874,109905,111357,121391,123735,
#Partially deleted in new
chr7	77798900	77957225	chr7:77798900-77957225	1	+	77840255	77954878	789624	17	71,80,57,70,159,166,165,187,156,219,129,273,132,87,96,126,2368,	0,41320,94707,101810,102861,109892,111344,121378,123722,130208,138809,141129,141627,143799,152716,154868,155957,
#Partially deleted in new
chr7	77840129	77924151	chr7:77840129-77924151	1	+	77840255	77922832	789624	9	171,57,12,70,159,166,165,187,1529,	0,53478,53852,60581,61632,68663,70115,80149,82493,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr7	77840179	77957222	chr7:77840179-77957222	1	+	77840255	77954878	789624	19	121,102,57,12,70,159,166,165,187,156,219,129,273,132,87,156,96,126,2365,	0,14553,53428,53802,60531,61582,68613,70065,80099,82443,88929,97530,99850,100348,102520,109498,111437,113589,114678,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	77895879	77895992	chr7:77895879-77895992	3	+	77895879	77895879	8553170	1	113,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	77906260	77938013	chr7:77906260-77938013	0	+	77906260	77906260	8553170	8	236,130,166,165,187,156,219,304,	0,1593,2532,3984,14018,16362,22848,31449,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	77908934	77940459	chr7:77908934-77940459	0	+	77908934	77908934	8553170	5	1475,187,156,219,430,	0,11344,13688,20174,31095,
#Partially deleted in new
chr7	77920424	77922886	chr7:77920424-77922886	0	+	77920424	77920424	8553170	2	41,264,	0,2198,
#Partially deleted in new
chr7	77940198	77954894	chr7:77940198-77954894	0	+	77940198	77940198	8553170	6	104,87,156,96,126,37,	0,2501,9479,11418,13570,14659,
#Partially deleted in new
chr7	78017056	79453574	chr7:78017056-79453574	3	-	78019314	79453320	0	22	2920,139,144,220,172,186,249,193,92,42,190,32,639,183,122,58,80,211,216,120,117,555,	0,61890,108637,110140,115832,117964,142968,150859,160954,168572,177817,184105,238886,326721,328865,352099,472704,484520,504373,610063,990033,1435963,
#Partially deleted in new
chr7	78017056	78627243	chr7:78017056-78627243	1	-	78019314	78627243	789624	20	2920,139,144,220,172,186,249,193,92,42,190,32,639,183,122,58,80,211,216,124,	0,61890,108637,110140,115832,117964,142968,150859,160954,168572,177817,184105,238886,326721,328865,352099,472704,484520,504373,610063,
#Partially deleted in new
chr7	78017075	79453555	chr7:78017075-79453555	1	-	78019314	79453320	0	21	2901,139,144,220,172,186,249,193,92,190,32,639,183,122,58,80,211,216,120,117,536,	0,61871,108618,110121,115813,117945,142949,150840,160935,177798,184086,238867,326702,328846,352080,472685,484501,504354,610044,990014,1435944,
#Partially deleted in new
chr7	78017080	78627243	chr7:78017080-78627243	1	-	78019314	78627243	789624	19	2896,139,144,220,172,186,249,193,92,190,32,639,183,122,58,80,211,216,124,	0,61866,108613,110116,115808,117940,142944,150835,160930,177793,184081,238862,326697,328841,352075,472680,484496,504349,610039,
#Partially deleted in new
chr7	78017080	78771323	chr7:78017080-78771323	1	-	78019919	78627168	789624	21	2896,89,139,144,220,172,186,249,193,92,190,32,639,183,122,58,80,211,216,120,473,	0,48493,61866,108613,110116,115808,117940,142944,150835,160930,177793,184081,238862,326697,328841,352075,472680,484496,504349,610039,753770,
#Partially deleted in new
chr7	78017091	79453487	chr7:78017091-79453487	1	-	78019125	79453320	789624	21	2124,53,139,144,220,172,249,193,92,190,32,639,183,122,58,80,211,216,120,117,468,	0,2832,61855,108602,110105,115797,142933,150824,160919,177782,184070,238851,326686,328830,352064,472669,484485,504338,610028,989998,1435928,
#Partially deleted in new
chr7	78019016	78771112	chr7:78019016-78771112	1	-	78019919	78627168	789624	22	960,89,139,144,220,172,186,249,193,92,42,190,32,639,183,122,58,80,211,216,120,262,	0,46557,59930,106677,108180,113872,116004,141008,148899,158994,166612,175857,182145,236926,324761,326905,350139,470744,482560,502413,608103,751834,
#Partially deleted in new
chr7	78019032	79453459	chr7:78019032-79453459	1	-	78019919	79453320	789624	23	944,89,139,144,220,172,186,249,193,92,42,190,32,639,183,122,58,80,211,216,120,117,440,	0,46541,59914,106661,108164,113856,115988,140992,148883,158978,166596,175841,182129,236910,324745,326889,350123,470728,482544,502397,608087,988057,1433987,
#Partially deleted in new
chr7	78019901	78065651	chr7:78019901-78065651	0	-	78019901	78065651	789624	3	75,37,78,	0,6166,45672,
#Partially deleted in new
chr7	78019960	78035016	chr7:78019960-78035016	0	-	78019960	78019960	8553170	2	16,84,	0,14972,
#Partially deleted in new
chr7	78035189	78065655	chr7:78035189-78065655	0	-	78035189	78035189	8553170	2	18,82,	0,30384,
#Partially deleted in new
chr7	78039558	78078973	chr7:78039558-78078973	0	-	78039558	78039558	8553170	2	73,27,	0,39388,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr7	78072557	78490029	chr7:78072557-78490029	1	-	78072929	78345973	789624	17	413,139,144,220,172,186,249,193,92,184,32,639,183,122,58,80,68,	0,6389,53136,54639,60331,62463,87467,95358,105453,122322,128604,183385,271220,273364,296598,417203,417404,
#Partially deleted in new
chr7	78078058	78771118	chr7:78078058-78771118	0	-	78256091	78627168	789624	21	1027,144,220,172,186,249,193,92,42,190,32,216,334,183,122,58,80,211,216,120,268,	0,47635,49138,54830,56962,81966,89857,99952,107570,116815,123103,177884,178189,265719,267863,291097,411702,423518,443371,549061,692792,
#Partially deleted in new
chr7	78078382	78490020	chr7:78078382-78490020	1	-	78078845	78345973	789624	16	703,144,220,172,186,249,193,92,184,32,639,183,122,58,80,59,	0,47311,48814,54506,56638,81642,89533,99628,116497,122779,177560,265395,267539,290773,411378,411579,
#Partially deleted in new
chr7	78132938	78489968	chr7:78132938-78489968	0	-	78132938	78489875	789624	13	122,186,249,193,92,42,190,32,639,183,122,58,208,	0,2082,27086,34977,45072,52690,61935,68223,123004,210839,212983,236217,356822,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	78134078	78134851	chr7:78134078-78134851	3	+	78134078	78134078	8553170	1	773,	0,
#Partially deleted in new
chr7	78158206	78178067	chr7:78158206-78178067	0	-	78158297	78178067	789624	4	144,249,193,57,	0,1818,9709,19804,
#Partially deleted in new
chr7	78159798	78167973	chr7:78159798-78167973	0	-	78160013	78167973	789624	2	475,58,	0,8117,
#Partially deleted in new
chr7	78160069	78195063	chr7:78160069-78195063	0	-	78160069	78195063	789624	5	204,193,92,42,184,	0,7846,17941,25559,34810,
#Deleted in new
chr7	78170194	78170915	chr7:78170194-78170915	3	+	78170194	78170194	8553170	1	721,	0,
#Partially deleted in new
chr7	78178035	78197856	chr7:78178035-78197856	0	-	78178035	78178035	8553170	5	67,224,42,190,26,	0,6392,7593,16838,19795,
#Partially deleted in new
chr7	78185504	78490001	chr7:78185504-78490001	0	-	78185504	78185504	8553170	9	166,190,32,639,183,122,58,80,40,	0,9369,15657,70438,158273,160417,183651,304256,304457,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	78251413	78489900	chr7:78251413-78489900	1	-	78255832	78489875	789624	5	5168,183,122,58,140,	0,92364,94508,117742,238347,
#Partially deleted in new
chr7	78255788	78771080	chr7:78255788-78771080	1	-	78255832	78627168	789624	9	793,183,122,58,80,211,216,120,230,	0,87989,90133,113367,233972,245788,265641,371331,515062,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	78256024	78770859	chr7:78256024-78770859	0	-	78256024	78554600	789624	10	557,183,122,58,80,211,216,105,120,9,	0,87753,89897,113131,233736,245552,265405,298542,371095,514826,
#Partially deleted in new
chr7	78256515	78285806	chr7:78256515-78285806	0	-	78256515	78256515	8553170	2	66,34,	0,29257,
#Partially deleted in new
chr7	78256542	78285768	chr7:78256542-78285768	0	-	78256542	78256542	8553170	2	39,61,	0,29165,
#Partially deleted in new
chr7	78343916	78490020	chr7:78343916-78490020	0	-	78343916	78345973	789624	6	44,129,122,58,80,59,	0,1527,2005,25239,145844,146045,
#Partially deleted in new
chr7	78347141	78359458	chr7:78347141-78359458	7	+	78347141	78347141	16724991	6	185,49,155,204,119,1183,	0,1235,2985,4612,5713,11134,
#Deleted in new
chr7	78347213	78350556	chr7:78347213-78350556	4	+	78347213	78347213	16724991	2	113,430,	0,2913,
#Deleted in new
chr7	78347235	78350529	chr7:78347235-78350529	4	+	78347235	78347235	16724991	3	91,49,403,	0,1141,2891,
#Deleted in new
chr7	78358291	78358872	chr7:78358291-78358872	5	+	78358291	78358291	16724991	1	581,	0,
#Partially deleted in new
chr7	78369155	78489791	chr7:78369155-78489791	0	-	78369155	78369155	8553170	2	58,31,	0,120605,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	78392625	78448999	chr7:78392625-78448999	3	-	78392625	78392625	8553170	2	1019,58,	0,56316,
#Partially deleted in new
chr7	78456925	78489829	chr7:78456925-78489829	0	-	78456925	78456925	8553170	2	31,69,	0,32835,
#Partially deleted in new
chr7	78484137	78490052	chr7:78484137-78490052	0	-	78484137	78484137	8553170	3	3255,80,91,	0,5623,5824,
#Deleted in new
chr7	78486529	78487028	chr7:78486529-78487028	7	+	78486529	78486529	16724991	1	499,	0,
#Partially deleted in new
chr7	78501720	78509383	chr7:78501720-78509383	0	-	78501720	78501720	8553170	2	67,33,	0,7630,
#Partially deleted in new
chr7	78501757	78519101	chr7:78501757-78519101	0	-	78501757	78501757	8553170	2	30,70,	0,17274,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	78518063	78568364	chr7:78518063-78568364	0	-	78518063	78518063	8553170	4	1063,216,56,270,	0,3366,49885,50031,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	78518658	78568198	chr7:78518658-78568198	0	-	78518658	78518658	8553170	3	468,216,250,	0,2771,49290,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	78614365	78771040	chr7:78614365-78771040	0	-	78614365	78614365	8553170	3	4638,120,190,	0,12754,156485,
#Partially deleted in new
chr7	78621278	78627197	chr7:78621278-78627197	0	-	78621278	78621278	8553170	2	22,78,	0,5841,
#Partially deleted in new
chr7	78901274	79000298	chr7:78901274-79000298	0	-	78901274	78901274	8553170	4	236,116,128,94,	0,1222,2746,98930,
#Deleted in new
chr7	78939849	78940895	chr7:78939849-78940895	3	+	78939849	78939849	8553170	2	35,437,	0,609,
#Partially deleted in new
chr7	78946706	79008938	chr7:78946706-79008938	0	-	78946706	78946706	8553170	4	243,126,117,180,	0,53498,60383,62052,
#Partially deleted in new
chr7	79006666	79453120	chr7:79006666-79453120	0	-	79006666	79006666	8553170	2	540,101,	0,446353,
#Partially deleted in new
chr7	79007190	79351885	chr7:79007190-79351885	0	-	79007190	79007190	8553170	2	16,86,	0,344609,
#Deleted in new
chr7	79008987	79012277	chr7:79008987-79012277	3	+	79008987	79008987	789624	3	137,145,194,	0,1939,3096,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	79030239	79030345	chr7:79030239-79030345	3	+	79030239	79030239	8553170	1	106,	0,
#Deleted in new
chr7	79124738	79125750	chr7:79124738-79125750	7	+	79124738	79124738	16724991	1	1012,	0,
#Partially deleted in new
chr7	79139828	79177210	chr7:79139828-79177210	3	+	79139828	79139828	8553170	3	30,55,232,	0,33102,37150,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	79343265	79343372	chr7:79343265-79343372	3	-	79343265	79343265	8553170	1	107,	0,
#Deleted in new
chr7	79353409	79354392	chr7:79353409-79354392	7	+	79353409	79353409	16724991	1	983,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	79409988	79453035	chr7:79409988-79453035	0	-	79409988	79409988	8553170	2	5686,16,	0,43031,
#Partially deleted in new
chr7	79452876	79459637	chr7:79452876-79459637	0	+	79452876	79452876	8553170	4	315,142,153,102,	0,1989,5970,6659,
#Partially deleted in new
chr7	79452881	79459706	chr7:79452881-79459706	3	+	79452881	79452881	8553170	3	310,153,171,	0,5965,6654,
#Partially deleted in new
chr7	79453110	79471200	chr7:79453110-79471200	1	+	79453110	79453110	789624	4	81,153,86,418,	0,5736,17483,17672,
#Partially deleted in new
chr7	79453157	79471196	chr7:79453157-79471196	1	+	79453157	79453157	789624	4	34,69,153,414,	0,429,5689,17625,
#Partially deleted in new
chr7	79453617	79459640	chr7:79453617-79459640	0	+	79453617	79453617	8553170	2	38,794,	0,5229,
#Partially deleted in new
chr7	79453626	79459640	chr7:79453626-79459640	0	+	79453626	79453626	8553170	3	29,153,105,	0,5220,5909,
#Partially deleted in new
chr7	79453633	79459640	chr7:79453633-79459640	0	+	79453633	79453633	8553170	4	22,122,153,105,	0,1252,5213,5902,
#Partially deleted in new
chr7	79453734	79459640	chr7:79453734-79459640	0	+	79453734	79453734	8553170	4	55,142,153,105,	0,1131,5112,5801,
#Partially deleted in new
chr7	79453752	79459421	chr7:79453752-79459421	1	+	79453752	79453752	8553170	3	37,153,15,	0,5094,5654,
#Partially deleted in new
chr7	79453959	79471208	chr7:79453959-79471208	1	+	79453959	79453959	789624	5	285,122,153,86,426,	0,926,4887,16634,16823,
#Partially deleted in new
chr7	79453991	79459769	chr7:79453991-79459769	1	+	79453991	79453991	789624	4	253,122,153,234,	0,894,4855,5544,
#Partially deleted in new
chr7	79454009	79459712	chr7:79454009-79459712	1	+	79454009	79454009	8553170	4	235,142,153,177,	0,856,4837,5526,
#Partially deleted in new
chr7	79454011	79471048	chr7:79454011-79471048	1	+	79454011	79454011	8553170	4	233,122,153,266,	0,874,4835,16771,
#Partially deleted in new
chr7	79454014	79459625	chr7:79454014-79459625	1	+	79454014	79454014	8553170	4	230,153,47,90,	0,4832,5392,5521,
#Partially deleted in new
chr7	79454036	79459640	chr7:79454036-79459640	0	+	79454036	79454036	8553170	3	208,153,105,	0,4810,5499,
#Partially deleted in new
chr7	79454553	79459600	chr7:79454553-79459600	0	+	79454553	79454553	8553170	3	454,153,65,	0,4293,4982,
#Partially deleted in new
chr7	79454828	79459630	chr7:79454828-79459630	0	+	79454828	79454828	8553170	4	179,91,153,95,	0,1261,4018,4707,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	79454885	79459640	chr7:79454885-79459640	0	+	79454885	79454885	8553170	4	122,291,153,105,	0,1004,3961,4650,
#Partially deleted in new
chr7	79454909	79459387	chr7:79454909-79459387	0	+	79454909	79454909	8553170	2	98,541,	0,3937,
#Partially deleted in new
chr7	79455000	79459640	chr7:79455000-79459640	0	+	79455000	79455000	8553170	3	374,153,105,	0,3846,4535,
#Partially deleted in new
chr7	79456037	79459640	chr7:79456037-79459640	0	+	79456037	79456037	8553170	2	143,794,	0,2809,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	79458389	79459640	chr7:79458389-79459640	0	+	79458389	79458389	8553170	3	341,153,105,	0,457,1146,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	79458410	79467470	chr7:79458410-79467470	0	+	79458410	79458410	8553170	2	589,7935,	0,1125,
#Deleted in new
chr7	79470426	79471208	chr7:79470426-79471208	0	+	79470426	79470426	8553170	2	253,426,	0,356,
#Partially deleted in new
chr7	79543910	79544853	chr7:79543910-79544853	7	-	79543910	79543910	16724991	1	943,	0,
#Deleted in new
chr7	79654108	79654227	chr7:79654108-79654227	7	+	79654108	79654108	16724991	1	119,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	79768027	79974161	chr7:79768027-79974161	0	+	79768027	79768027	8553170	6	102,72,107,101,83,4614,	0,4901,43704,147039,188942,201520,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	79912103	79912208	chr7:79912103-79912208	3	-	79912103	79912103	8553170	1	105,	0,
#Deleted in new
chr7	80096599	80097215	chr7:80096599-80097215	7	-	80096599	80096599	16724991	1	616,	0,
#Partially deleted in new
chr7	80106207	80217965	chr7:80106207-80217965	1	+	80135160	80217493	8553170	12	72,156,93,151,251,43,142,158,129,130,154,663,	0,5015,28012,28210,28820,82743,82882,93017,97496,104761,106508,111095,
#Partially deleted in new
chr7	80133658	80218000	chr7:80133658-80218000	1	+	80135160	80217493	8553170	10	654,171,251,43,142,158,129,130,154,698,	0,759,1369,55292,55431,65566,70045,77310,79057,83644,
#Partially deleted in new
chr7	80133829	80219060	chr7:80133829-80219060	1	+	80135160	80217493	8553170	10	219,93,247,43,142,158,129,130,154,1758,	0,390,1202,55121,55260,65395,69874,77139,78886,83473,
#Partially deleted in new
chr7	80133838	80219356	chr7:80133838-80219356	1	+	80135160	80217493	8553170	11	210,93,151,251,43,142,158,129,130,154,2054,	0,381,579,1189,55112,55251,65386,69865,77130,78877,83464,
#Partially deleted in new
chr7	80133839	80218049	chr7:80133839-80218049	1	+	80135160	80217493	8553170	9	473,251,43,142,158,129,130,154,747,	0,1188,55111,55250,65385,69864,77129,78876,83463,
#Partially deleted in new
chr7	80133854	80219362	chr7:80133854-80219362	1	+	80135160	80217493	8553170	11	194,93,151,273,43,142,158,129,130,154,2060,	0,365,563,1151,55096,55235,65370,69849,77114,78861,83448,
#Partially deleted in new
chr7	80133860	80218260	chr7:80133860-80218260	1	+	80135160	80217493	8553170	10	452,151,273,43,142,158,129,130,154,958,	0,557,1145,55090,55229,65364,69843,77108,78855,83442,
#Partially deleted in new
chr7	80133862	80219362	chr7:80133862-80219362	1	+	80135160	80217493	8553170	11	206,93,151,251,43,142,158,129,130,154,2060,	0,357,555,1165,55088,55227,65362,69841,77106,78853,83440,
#Partially deleted in new
chr7	80133900	80218137	chr7:80133900-80218137	1	+	80135160	80217493	8553170	10	412,151,251,43,142,158,129,130,154,835,	0,517,1127,55050,55189,65324,69803,77068,78815,83402,
#Partially deleted in new
chr7	80133917	80217988	chr7:80133917-80217988	1	+	80135160	80217493	789624	11	131,93,171,273,43,142,158,129,130,154,686,	0,302,500,1088,55033,55172,65307,69786,77051,78798,83385,
#Partially deleted in new
chr7	80133947	80217958	chr7:80133947-80217958	1	+	80135160	80217493	8553170	10	365,169,251,43,142,158,129,130,154,656,	0,452,1080,55003,55142,65277,69756,77021,78768,83355,
#Partially deleted in new
chr7	80133957	80218111	chr7:80133957-80218111	1	+	80135160	80217493	8553170	9	355,273,43,142,158,129,130,154,809,	0,1048,54993,55132,65267,69746,77011,78758,83345,
#Partially deleted in new
chr7	80134376	80219354	chr7:80134376-80219354	1	+	80135160	80217493	0	9	192,273,43,142,158,129,130,154,2052,	0,629,54574,54713,64848,69327,76592,78339,82926,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	80134787	80226181	chr7:80134787-80226181	1	+	80135160	80217493	789624	8	491,43,142,158,129,130,154,8879,	0,54163,54302,64437,68916,76181,77928,82515,
#Partially deleted in new
chr7	80134801	80219388	chr7:80134801-80219388	0	+	80135160	80199229	8553170	6	477,158,129,130,154,2086,	0,64423,68902,76167,77914,82501,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	80134849	80218145	chr7:80134849-80218145	0	+	80135160	80180608	8553170	9	429,160,43,142,158,129,130,154,843,	0,45745,54101,54240,64375,68854,76119,77866,82453,
#Partially deleted in new
chr7	80134851	80218032	chr7:80134851-80218032	0	+	80135160	80188950	8553170	8	427,69,142,158,129,130,154,730,	0,54073,54238,64373,68852,76117,77864,82451,
#Partially deleted in new
chr7	80134852	80219362	chr7:80134852-80219362	0	+	80135160	80188960	8553170	8	421,43,142,158,129,130,154,2060,	0,54098,54237,64372,68851,76116,77863,82450,
#Partially deleted in new
chr7	80135014	80217551	chr7:80135014-80217551	0	+	80135160	80211033	8553170	4	264,130,154,249,	0,75954,77701,82288,
#Partially deleted in new
chr7	80135078	80218002	chr7:80135078-80218002	1	+	80135160	80217446	8553170	4	200,43,142,700,	0,53872,54011,82224,
#Partially deleted in new
chr7	80135288	80211098	chr7:80135288-80211098	0	+	80135288	80135288	8553170	6	135,43,142,158,129,130,	0,53662,53801,63936,68415,75680,
#Partially deleted in new
chr7	80135693	80219424	chr7:80135693-80219424	1	+	80188988	80217493	0	8	379,43,142,158,129,130,154,2122,	0,53257,53396,63531,68010,75275,77022,81609,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	80184103	80217988	chr7:80184103-80217988	0	+	80184103	80184103	8553170	8	87,43,142,158,129,130,154,686,	0,4847,4986,15121,19600,26865,28612,33199,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	80184212	80189210	chr7:80184212-80189210	0	+	80184212	80184212	8553170	3	89,43,121,	0,4738,4877,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	80186319	80217308	chr7:80186319-80217308	0	+	80186319	80186319	8553170	8	84,43,142,158,129,130,154,6,	0,2631,2770,12905,17384,24649,26396,30983,
#Partially deleted in new
chr7	80187058	80219344	chr7:80187058-80219344	0	+	80187058	80187058	8553170	8	408,43,142,158,129,130,154,2042,	0,1892,2031,12166,16645,23910,25657,30244,
#Partially deleted in new
chr7	80187122	80219354	chr7:80187122-80219354	0	+	80187122	80187122	8553170	8	64,43,142,158,129,130,154,2052,	0,1828,1967,12102,16581,23846,25593,30180,
#Partially deleted in new
chr7	80199312	80216163	chr7:80199312-80216163	0	+	80199312	80212892	8553170	4	70,129,130,3448,	0,4391,11656,13403,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	80201417	80218000	chr7:80201417-80218000	0	+	80201417	80201417	8553170	4	2415,130,154,698,	0,9551,11298,15885,
#Partially deleted in new
chr7	80210111	80217812	chr7:80210111-80217812	0	+	80210111	80210111	8553170	3	987,154,510,	0,2604,7191,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	80245925	80246225	chr7:80245925-80246225	3	+	80245925	80245925	8553170	1	300,	0,
#Partially deleted in new
chr7	80246408	80312456	chr7:80246408-80312456	3	-	80246408	80246408	8553170	5	94,135,147,92,110,	0,2323,16803,56463,65938,
#Partially deleted in new
chr7	80312573	80373887	chr7:80312573-80373887	0	-	80312573	80312573	8553170	3	153,168,76,	0,59553,61238,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	80318252	80318544	chr7:80318252-80318544	3	+	80318252	80318252	8553170	1	292,	0,
#Partially deleted in new
chr7	80325489	80373862	chr7:80325489-80373862	0	-	80325489	80325489	8553170	3	99,168,51,	0,46637,48322,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	80330186	80372229	chr7:80330186-80372229	1	-	80330186	80330186	8553170	7	341,159,82,85,140,110,103,	0,1023,1399,3496,24820,31928,41940,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	80330194	80372167	chr7:80330194-80372167	0	-	80330194	80330194	8553170	3	333,159,41,	0,1015,41932,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	80330195	80373834	chr7:80330195-80373834	0	-	80330195	80330195	8553170	2	332,23,	0,43616,
#Partially deleted in new
chr7	80338747	80373887	chr7:80338747-80373887	0	-	80338747	80338747	8553170	4	180,140,168,72,	0,16259,33379,35068,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	80355006	80373877	chr7:80355006-80373877	0	-	80355006	80355006	8553170	5	140,122,110,168,66,	0,5517,7108,17120,18805,
#Partially deleted in new
chr7	80361468	80373887	chr7:80361468-80373887	0	-	80361468	80361468	8553170	4	43,110,168,72,	0,646,10658,12347,
#Deleted in new
chr7	80371920	80374469	chr7:80371920-80374469	0	-	80371920	80371920	8553170	3	374,179,129,	0,1891,2420,
#Partially deleted in new
chr7	80373839	80384127	chr7:80373839-80384127	0	-	80373839	80373839	8553170	5	151,120,261,210,80,	0,501,6455,8011,10208,
#Partially deleted in new
chr7	80373839	80384124	chr7:80373839-80384124	0	-	80373839	80373839	8553170	4	151,120,261,222,	0,501,6455,10063,
#Partially deleted in new
chr7	80373839	80384105	chr7:80373839-80384105	0	-	80373839	80373839	8553170	4	151,120,180,58,	0,501,6455,10208,
#Partially deleted in new
chr7	80373839	80384124	chr7:80373839-80384124	2	-	80373839	80373839	8553170	4	151,120,152,77,	0,501,6455,10208,
#Partially deleted in new
chr7	80373854	80384127	chr7:80373854-80384127	0	-	80373854	80373854	8553170	5	136,120,180,210,80,	0,486,6440,7996,10193,
#Partially deleted in new
chr7	80373861	80390011	chr7:80373861-80390011	0	-	80373861	80373861	8553170	6	129,120,152,222,131,97,	0,479,6433,10041,10987,16053,
#Partially deleted in new
chr7	80377553	80377835	chr7:80377553-80377835	7	-	80377553	80377553	16724991	1	282,	0,
#Partially deleted in new
chr7	80383979	80390005	chr7:80383979-80390005	0	-	80383979	80383979	8553170	2	145,91,	0,5935,
#Partially deleted in new
chr7	80458670	80512020	chr7:80458670-80512020	3	-	80458670	80511926	789624	8	191,154,130,129,158,142,43,212,	0,3488,3831,15580,20170,29864,35934,53138,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	80524860	80547249	chr7:80524860-80547249	0	+	80524860	80524860	8553170	3	55,77,710,	0,21330,21679,
#Partially deleted in new
chr7	80602149	80674409	chr7:80602149-80674409	1	+	80646740	80674147	0	14	230,94,209,161,148,180,92,47,70,188,119,74,55,427,	0,43938,44502,54390,58913,60840,62256,64293,67803,68827,69772,70620,71205,71833,
#Partially deleted in new
chr7	80602149	80647215	chr7:80602149-80647215	0	+	80602149	80602149	8553170	3	230,94,564,	0,43938,44502,
#Partially deleted in new
chr7	80602206	80674416	chr7:80602206-80674416	1	+	80656647	80674147	789624	12	173,161,148,180,92,47,70,188,119,74,55,434,	0,54333,58856,60783,62199,64236,67746,68770,69715,70563,71148,71776,
#Partially deleted in new
chr7	80602224	80646726	chr7:80602224-80646726	0	+	80602224	80602224	8553170	4	155,172,94,75,	0,34607,43863,44427,
#Partially deleted in new
chr7	80623894	80633362	chr7:80623894-80633362	0	+	80623894	80623894	8553170	2	296,166,	0,9302,
#Partially deleted in new
chr7	80624082	80661210	chr7:80624082-80661210	0	+	80646740	80661210	789624	5	108,94,209,161,148,	0,22005,22569,32457,36980,
#Partially deleted in new
chr7	80624968	80656700	chr7:80624968-80656700	0	+	80646740	80656700	789624	4	72,94,209,161,	0,21119,21683,31571,
#Partially deleted in new
chr7	80626155	80656700	chr7:80626155-80656700	0	+	80646740	80656700	789624	4	77,94,209,161,	0,19932,20496,30384,
#Partially deleted in new
chr7	80638515	80674416	chr7:80638515-80674416	1	+	80646740	80674147	0	12	231,94,209,161,148,180,92,188,119,74,55,434,	0,7572,8136,18024,22547,24474,25890,32461,33406,34254,34839,35467,
#Partially deleted in new
chr7	80638515	80674416	chr7:80638515-80674416	1	+	80646740	80674147	0	13	231,94,209,161,148,92,47,70,188,119,74,55,434,	0,7572,8136,18024,22547,25890,27927,31437,32461,33406,34254,34839,35467,
#Partially deleted in new
chr7	80638515	80674416	chr7:80638515-80674416	1	+	80646740	80671970	0	13	231,94,209,161,148,180,92,47,70,119,74,55,434,	0,7572,8136,18024,22547,24474,25890,27927,31437,33406,34254,34839,35467,
#Partially deleted in new
chr7	80638642	80656683	chr7:80638642-80656683	0	+	80638642	80638642	8553170	4	104,94,209,92,	0,7445,8009,17949,
#Partially deleted in new
chr7	80638643	80656616	chr7:80638643-80656616	0	+	80646740	80656616	789624	5	103,86,94,209,77,	0,1200,7444,8008,17896,
#Partially deleted in new
chr7	80638675	80674416	chr7:80638675-80674416	1	+	80646740	80674147	0	14	71,94,209,161,148,180,92,47,70,188,119,74,55,434,	0,7412,7976,17864,22387,24314,25730,27767,31277,32301,33246,34094,34679,35307,
#Partially deleted in new
chr7	80638675	80677008	chr7:80638675-80677008	1	+	80646740	80674147	0	15	71,94,209,161,148,180,92,47,70,188,119,74,55,165,625,	0,7412,7976,17864,22387,24314,25730,27767,31277,32301,33246,34094,34679,35307,37708,
#Partially deleted in new
chr7	80646328	80663005	chr7:80646328-80663005	0	+	80646740	80663005	789624	5	31,209,161,148,16,	0,323,10211,14734,16661,
#Partially deleted in new
chr7	80646328	80674416	chr7:80646328-80674416	1	+	80646740	80674147	0	13	31,209,161,148,180,92,47,70,188,119,74,55,434,	0,323,10211,14734,16661,18077,20114,23624,24648,25593,26441,27026,27654,
#Partially deleted in new
chr7	80646361	80663169	chr7:80646361-80663169	0	+	80646740	80663169	789624	5	157,209,161,148,180,	0,290,10178,14701,16628,
#Partially deleted in new
chr7	80646445	80674119	chr7:80646445-80674119	0	+	80646740	80674119	789624	12	415,161,148,180,92,47,70,188,119,74,55,137,	0,10094,14617,16544,17960,19997,23507,24531,25476,26324,26909,27537,
#Partially deleted in new
chr7	80646708	80664497	chr7:80646708-80664497	0	+	80646740	80663048	789624	4	152,121,180,92,	0,9831,16281,17697,
#Deleted in new
chr7	80662330	80662585	chr7:80662330-80662585	7	-	80662330	80662330	16724991	1	255,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	80665913	80679277	chr7:80665913-80679277	0	+	80665913	80665913	8553170	5	576,1212,119,1378,2894,	0,4039,6008,6856,10470,
#Deleted in new
chr7	80673375	80676404	chr7:80673375-80676404	0	+	80673375	80674147	789624	3	34,165,297,	0,607,2732,
#Partially deleted in new
chr7	80742537	80919351	chr7:80742537-80919351	1	-	80744893	80916781	789624	18	2770,131,68,158,42,89,223,145,70,115,143,120,91,120,63,161,141,524,	0,6360,8731,15793,19078,22617,46768,55554,58219,60127,61568,63101,68073,75761,84887,86047,174141,176290,
#Partially deleted in new
chr7	80744867	80922359	chr7:80744867-80922359	3	-	80744893	80916781	789624	18	440,131,68,158,42,89,223,145,70,115,143,120,91,120,63,161,141,95,	0,4030,6401,13463,16748,20287,44438,53224,55889,57797,59238,60771,65743,73431,82557,83717,171811,177397,
#Partially deleted in new
chr7	80793356	80919183	chr7:80793356-80919183	0	-	80810681	80916781	789624	9	137,145,70,115,143,120,91,141,356,	0,4735,7400,9308,10749,12282,17254,123322,125471,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	80796388	80798238	chr7:80796388-80798238	0	-	80796388	80796388	8553170	2	236,147,	0,1703,
#Deleted in new
chr7	80815948	80818409	chr7:80815948-80818409	0	-	80815948	80815948	8553170	2	276,111,	0,2350,
#Partially deleted in new
chr7	80827429	80918429	chr7:80827429-80918429	0	-	80828744	80916781	789624	5	58,161,88,141,129,	0,1155,78399,89249,90871,
#Partially deleted in new
chr7	80827448	80919183	chr7:80827448-80919183	0	-	80828744	80916781	789624	5	39,161,88,141,356,	0,1136,78380,89230,91379,
#Partially deleted in new
chr7	80847259	80919182	chr7:80847259-80919182	0	-	80847259	80847259	8553170	3	86,141,355,	0,69419,71568,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	80972515	80974724	chr7:80972515-80974724	3	-	80972515	80972515	8553170	1	2209,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	81175507	81190390	chr7:81175507-81190390	3	+	81175507	81175507	8553170	5	74,106,140,72,323,	0,376,12283,14397,14560,
#Partially deleted in new
chr7	81187789	81199115	chr7:81187789-81199115	1	+	81187789	81187789	8553170	3	141,72,226,	0,2115,11100,
#Deleted in new
chr7	81191397	81192009	chr7:81191397-81192009	7	+	81191397	81191397	16724991	1	612,	0,
#Deleted in new
chr7	81335105	81335183	chr7:81335105-81335183	7	+	81335105	81335105	16724991	1	78,	0,
#Partially deleted in new
chr7	81431730	81432796	chr7:81431730-81432796	7	+	81431730	81431730	16724991	3	217,154,110,	0,606,956,
#Deleted in new
chr7	81463035	81463613	chr7:81463035-81463613	7	-	81463035	81463035	16724991	1	578,	0,
#Partially deleted in new
chr7	81489203	81690492	chr7:81489203-81690492	7	-	81489203	81489203	16724991	8	363,139,148,146,92,171,168,228,	0,26430,39225,70916,89213,108452,118272,201061,
#Partially deleted in new
chr7	81489471	81608710	chr7:81489471-81608710	5	-	81489471	81489471	16724991	21	95,94,125,252,139,146,222,106,157,179,146,113,92,183,146,104,123,95,171,168,33,	0,7628,9486,25731,26162,70648,71258,72242,78437,80796,84553,85406,88945,92250,94823,97408,99381,101500,108184,118004,119206,
#Partially deleted in new
chr7	81528402	81570382	chr7:81528402-81570382	4	-	81528402	81528402	16724991	5	174,146,222,106,115,	0,31717,32327,33311,41865,
#Partially deleted in new
chr7	81576385	81626216	chr7:81576385-81626216	4	-	81576385	81576385	16724991	9	3348,183,146,37,132,171,168,75,103,	0,5336,7909,10561,18139,21270,31090,48766,49728,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	81576386	81691406	chr7:81576386-81691406	5	-	81576386	81576386	16724991	11	3347,183,151,146,123,136,171,168,71,75,78,	0,5335,6733,7908,12466,18134,21269,31089,47986,48765,114942,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	81581652	81690414	chr7:81581652-81690414	4	-	81581652	81581652	16724991	8	252,151,146,132,171,168,75,150,	0,1467,2642,12872,16003,25823,43499,108612,
#Partially deleted in new
chr7	81610883	81611326	chr7:81610883-81611326	7	-	81610883	81610883	16724991	1	443,	0,
#Partially deleted in new
chr7	81699007	81770198	chr7:81699007-81770198	3	-	81702580	81769971	0	18	3750,146,107,141,75,97,39,134,103,128,175,119,121,143,115,113,166,315,	0,6382,6639,7279,8282,11139,12473,18224,21737,26882,30597,44345,45992,53112,58181,59684,63699,70876,
#Partially deleted in new
chr7	81699007	81770047	chr7:81699007-81770047	1	-	81702580	81769971	0	18	3750,146,107,141,75,97,39,134,103,128,175,119,121,143,115,113,166,164,	0,6382,6639,7279,8282,11139,12473,18224,21737,26882,30597,44345,45992,53112,58181,59684,63699,70876,
#Partially deleted in new
chr7	81702126	81770048	chr7:81702126-81770048	1	-	81702580	81769971	0	18	631,146,107,141,75,97,39,134,103,128,175,119,121,128,115,113,166,165,	0,3263,3520,4160,5163,8020,9354,15105,18618,23763,27478,41226,42873,49993,55062,56565,60580,67757,
#Partially deleted in new
chr7	81742690	81770048	chr7:81742690-81770048	1	-	81742941	81769971	0	8	259,119,121,143,115,113,166,165,	0,662,2309,9429,14498,16001,20016,27193,
#Partially deleted in new
chr7	81742731	81770047	chr7:81742731-81770047	1	-	81742941	81769971	0	8	218,119,121,128,115,113,166,164,	0,621,2268,9388,14457,15960,19975,27152,
#Partially deleted in new
chr7	81750888	81770136	chr7:81750888-81770136	1	-	81752111	81769971	0	5	1374,115,113,166,253,	0,6300,7803,11818,18995,
#Partially deleted in new
chr7	81751915	81770024	chr7:81751915-81770024	1	-	81752111	81769971	789624	5	332,115,113,166,141,	0,5273,6776,10791,17968,
#Partially deleted in new
chr7	81755120	81769971	chr7:81755120-81769971	1	-	81755990	81769971	789624	5	943,115,113,166,88,	0,2068,3571,7586,14763,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	81755120	81769971	chr7:81755120-81769971	1	-	81757184	81769971	789624	4	2183,113,166,88,	0,3571,7586,14763,
#Partially deleted in new
chr7	81756985	81762996	chr7:81756985-81762996	0	-	81756985	81756985	8553170	3	318,113,290,	0,1706,5721,
#Partially deleted in new
chr7	81757245	81770398	chr7:81757245-81770398	0	-	81757245	81769971	789624	5	58,113,166,145,108,	0,1446,5461,12638,13045,
#Partially deleted in new
chr7	81758703	81770438	chr7:81758703-81770438	0	-	81758703	81769971	789624	4	101,166,130,148,	0,4003,11180,11587,
#Partially deleted in new
chr7	81946443	82443798	chr7:81946443-82443798	3	-	81950391	82443459	789624	39	4065,83,110,130,56,53,153,72,39,68,87,104,63,88,98,61,21,77,62,72,72,75,75,78,90,50,79,105,159,100,51,70,132,130,42,60,117,82,434,	0,12831,13276,15450,15996,17612,17763,19150,20725,21152,22443,23437,24231,25333,28011,36123,36870,38191,44741,48424,50735,58979,59321,61235,65710,67017,67957,86353,91633,113984,117860,120011,138325,170600,190191,224106,388691,403124,496921,
#Partially deleted in new
chr7	81950101	82443715	chr7:81950101-82443715	1	-	81950391	82443459	789624	39	407,83,110,130,56,53,153,72,39,68,87,104,63,88,98,61,77,62,72,72,57,75,75,78,90,50,79,105,159,100,51,70,132,130,42,60,117,82,351,	0,9173,9618,11792,12338,13954,14105,15492,17067,17494,18785,19779,20573,21675,24353,32465,34533,41083,44766,47077,51557,55321,55663,57577,62052,63359,64299,82695,87975,110326,114202,116353,134667,166942,186533,220448,385033,399466,493263,
#Deleted in new
chr7	81961893	81964282	chr7:81961893-81964282	0	-	81961893	81961893	8553170	3	130,56,227,	0,546,2162,
#Deleted in new
chr7	81967164	81971089	chr7:81967164-81971089	0	-	81967164	81967164	8553170	3	43,68,415,	0,431,3510,
#Partially deleted in new
chr7	81969880	82005790	chr7:81969880-82005790	0	-	81969880	82005790	789624	12	104,63,88,98,61,77,62,72,57,57,75,26,	0,794,1896,4574,12686,14754,21304,24987,27298,31778,35542,35884,
#Partially deleted in new
chr7	82005330	82012251	chr7:82005330-82012251	0	-	82005330	82005330	8553170	4	167,75,78,98,	0,434,2348,6823,
#Partially deleted in new
chr7	82005446	82033072	chr7:82005446-82033072	0	-	82005446	82005446	8553170	8	51,75,78,90,50,79,105,54,	0,318,2232,6707,8014,8954,27350,27572,
#Partially deleted in new
chr7	82007661	82032901	chr7:82007661-82032901	0	-	82007661	82007661	8553170	5	95,90,50,79,105,	0,4492,5799,6739,25135,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	82009176	82029955	chr7:82009176-82029955	3	+	82009176	82009176	789624	5	86,125,84,55,2301,	0,11633,11945,14666,18478,
#Partially deleted in new
chr7	82012042	82038235	chr7:82012042-82038235	0	-	82012042	82012042	8553170	5	201,50,79,105,159,	0,1418,2358,20754,26034,
#Partially deleted in new
chr7	82050335	82443716	chr7:82050335-82443716	1	-	82050577	82443459	789624	11	293,100,51,70,132,130,42,60,117,82,352,	0,10092,13968,16119,34433,66708,86299,120214,284799,299232,393029,
#Partially deleted in new
chr7	82050934	82084836	chr7:82050934-82084836	0	-	82050934	82050934	8553170	5	178,100,51,70,68,	0,9493,13369,15520,33834,
#Partially deleted in new
chr7	82117043	82343236	chr7:82117043-82343236	0	-	82117043	82117043	8553170	5	130,42,60,117,183,	0,19591,53506,218091,226010,
#Deleted in new
chr7	82589847	82590691	chr7:82589847-82590691	7	-	82589847	82589847	16724991	1	844,	0,
#Deleted in new
chr7	82657034	82657411	chr7:82657034-82657411	7	+	82657034	82657034	16724991	1	377,	0,
#Partially deleted in new
chr7	82754012	83162930	chr7:82754012-83162930	3	-	82758574	83162592	0	25	4703,146,135,74,142,195,181,72,94,27,125,51,215,68,109,126,91,137,2188,2015,5080,717,1407,1645,586,	0,6626,7346,47505,51675,68482,70223,72576,73860,81654,84205,87446,91258,92554,93126,125324,148638,154864,160673,195463,197843,211758,380237,400735,408332,
#Partially deleted in new
chr7	82801536	82822590	chr7:82801536-82822590	0	-	82801536	82801536	8553170	4	55,142,183,96,	0,4151,19575,20958,
#Partially deleted in new
chr7	82820476	83162930	chr7:82820476-83162930	1	-	82822477	83162592	0	20	2213,181,72,94,27,125,51,215,68,109,126,91,137,2188,2015,5080,717,1407,1645,586,	0,3759,6112,7396,15190,17741,20982,24794,26090,26662,58860,82174,88400,94209,128999,131379,145294,313773,334271,341868,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	82822096	82894454	chr7:82822096-82894454	0	-	82822096	82822096	8553170	11	593,181,72,94,125,51,215,68,101,126,58,	0,2139,4492,5776,16121,19362,23174,24470,25050,57240,72300,
#Partially deleted in new
chr7	82822108	82879462	chr7:82822108-82879462	1	-	82822477	82847199	0	10	581,181,72,94,125,51,215,68,101,126,	0,2127,4480,5764,16109,19350,23162,24458,25038,57228,
#Partially deleted in new
chr7	82838217	82879462	chr7:82838217-82879462	0	-	82848907	82879462	789624	7	125,51,215,68,109,54,126,	0,3241,7053,8349,8921,10650,41119,
#Partially deleted in new
chr7	82845426	82879462	chr7:82845426-82879462	0	-	82868139	82879462	789624	5	59,68,109,89,126,	0,1140,1712,22680,33910,
#Partially deleted in new
chr7	82914360	82950748	chr7:82914360-82950748	1	-	82914491	82950747	789624	2	2513,1273,	0,35115,
#Partially deleted in new
chr7	82966420	83134610	chr7:82966420-83134610	0	-	82966420	82966420	8553170	2	67,361,	0,167829,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	83017897	83018011	chr7:83017897-83018011	7	+	83017897	83017897	16724991	1	114,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	83355153	83362266	chr7:83355153-83362266	3	+	83355153	83355153	8553170	2	215,116,	0,6997,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr7	83363237	83649008	chr7:83363237-83649008	1	-	83367585	83648542	789624	17	4801,140,68,167,42,92,223,145,70,115,143,120,94,120,60,161,581,	0,22056,23745,29317,31059,33400,36790,39394,42212,42707,43859,45130,55152,103244,106005,126876,285190,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr7	83363237	83649113	chr7:83363237-83649113	3	-	83367585	83648542	789624	17	4801,140,68,167,42,92,223,145,70,115,143,120,94,120,60,161,686,	0,22056,23745,29317,31059,33400,36790,39394,42212,42707,43859,45130,55152,103244,106005,126876,285190,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr7	83363905	83641431	chr7:83363905-83641431	1	-	83367585	83490209	789624	17	4133,140,68,167,42,92,223,145,70,115,143,120,94,120,60,161,100,	0,21388,23077,28649,30391,32732,36122,38726,41544,42039,43191,44462,54484,102576,105337,126208,277426,
#Partially deleted in new
chr7	83367484	83641431	chr7:83367484-83641431	0	-	83367484	83367484	8553170	17	554,140,68,167,42,92,223,145,70,115,143,120,94,120,60,161,100,	0,17809,19498,25070,26812,29153,32543,35147,37965,38460,39612,40883,50905,98997,101758,122629,273847,
#Partially deleted in new
chr7	83371495	83648550	chr7:83371495-83648550	1	-	83372269	83648542	789624	17	792,140,68,167,42,92,223,145,70,115,143,120,94,120,60,161,123,	0,13798,15487,21059,22801,25142,28532,31136,33954,34449,35601,36872,46894,94986,97747,118618,276932,
#Deleted in new
chr7	83372651	83373096	chr7:83372651-83373096	3	-	83372651	83372651	8553170	1	445,	0,
#Duplicated in new
chr7	83407139	83462160	chr7:83407139-83462160	0	-	83407139	83407139	8553170	3	100,120,113,	0,1228,54908,
#Partially deleted in new
chr7	83408367	83612648	chr7:83408367-83612648	0	-	83408367	83408367	8553170	6	120,94,120,60,161,71,	0,10022,58114,60875,81746,204210,
#Partially deleted in new
chr7	83424879	83425002	chr7:83424879-83425002	7	+	83424879	83424879	16724991	1	123,	0,
#Partially deleted in new
chr7	83490187	83648802	chr7:83490187-83648802	0	-	83616707	83648542	789624	3	87,101,375,	0,126424,158240,
#Partially deleted in new
chr7	83663418	83664625	chr7:83663418-83664625	7	+	83663418	83663418	16724991	1	1207,	0,
#Partially deleted in new
chr7	83955776	84194901	chr7:83955776-84194901	3	-	83961370	84194586	789624	17	6050,143,65,158,42,92,220,145,70,115,143,120,94,120,63,158,427,	0,7428,21355,25544,29659,46178,49562,51576,55245,55406,58432,90547,104688,154693,173346,179017,238698,
#Partially deleted in new
chr7	83961300	84195445	chr7:83961300-84195445	1	-	83961370	84194586	789624	18	526,143,65,158,42,92,220,145,70,115,143,120,94,120,63,158,194,82,	0,1904,15831,20020,24135,40654,44038,46052,49721,49882,52908,85023,99164,149169,167822,173493,233174,234063,
#Partially deleted in new
chr7	84110475	84195161	chr7:84110475-84195161	0	-	84110475	84194586	789624	5	114,63,158,194,24,	0,18647,24318,83999,84662,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	84194474	84492549	chr7:84194474-84492549	0	-	84194474	84194586	789624	5	194,86,77,87,90,	0,112732,177349,294621,297985,
#Partially deleted in new
chr7	84194528	84492724	chr7:84194528-84492724	0	-	84194528	84194586	789624	4	140,86,77,265,	0,112678,177295,297931,
#Partially deleted in new
chr7	84306381	84372291	chr7:84306381-84372291	0	-	84306381	84306381	8553170	4	230,86,77,295,	0,825,65442,65615,
#Partially deleted in new
chr7	84307206	84372268	chr7:84307206-84372268	0	-	84307206	84307206	8553170	3	86,77,74,	0,64617,64988,
#Deleted in new
chr7	84528121	84528830	chr7:84528121-84528830	7	-	84528121	84528121	16724991	1	709,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	84532475	84574843	chr7:84532475-84574843	3	+	84532475	84532475	789624	3	132,107,3865,	0,16671,38503,
#Partially deleted in new
chr7	84549205	84584322	chr7:84549205-84584322	0	+	84549205	84549205	8553170	3	48,129,172,	0,21773,34945,
#Deleted in new
chr7	84847876	84848253	chr7:84847876-84848253	7	-	84847876	84847876	16724991	1	377,	0,
#Deleted in new
chr7	84876553	84876956	chr7:84876553-84876956	7	+	84876553	84876553	16724991	1	403,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	84939334	84940256	chr7:84939334-84940256	3	-	84939334	84939334	8553170	1	922,	0,
#Partially deleted in new
chr7	84939348	84940245	chr7:84939348-84940245	3	-	84939348	84939348	8553170	2	284,498,	0,399,
#Deleted in new
chr7	84983555	84984506	chr7:84983555-84984506	7	+	84983555	84983555	16724991	1	951,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr7	84995552	85121935	chr7:84995552-85121935	3	-	84999439	85121891	789624	17	4313,140,65,158,42,89,223,145,70,115,143,129,94,120,63,161,195,	0,11249,17229,19506,22699,24680,26838,41336,45120,46618,60164,69871,72638,77409,85964,102252,126188,
#Partially deleted in new
chr7	84999396	85041939	chr7:84999396-85041939	0	-	84999396	84999396	8553170	10	469,140,65,158,42,89,223,145,70,102,	0,7405,13385,15662,18855,20836,22994,37492,41276,42441,
#Deleted in new
chr7	85027827	85029692	chr7:85027827-85029692	7	+	85027827	85027827	16724991	1	1865,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	85041077	85055765	chr7:85041077-85055765	0	-	85041077	85041077	8553170	2	1208,49,	0,14639,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	85050356	85186855	chr7:85050356-85186855	1	-	85050726	85121891	789624	10	394,143,129,94,120,63,161,191,132,178,	0,5360,15067,17834,22605,31160,47448,71384,103251,136321,
#Deleted in new
chr7	85381117	85381375	chr7:85381117-85381375	7	-	85381117	85381117	16724991	1	258,	0,
#Partially deleted in new
chr7	85421121	85489293	chr7:85421121-85489293	3	+	85421121	85421121	789624	4	137,130,109,412,	0,28738,54130,67760,
#Partially deleted in new
chr7	85475226	85489232	chr7:85475226-85489232	0	+	85475226	85475226	8553170	2	134,351,	0,13655,
#Deleted in new
chr7	85636012	85636344	chr7:85636012-85636344	7	-	85636012	85636012	16724991	1	332,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	86216784	86217733	chr7:86216784-86217733	7	-	86216784	86216784	16724991	1	949,	0,
#Partially deleted in new
chr7	86643913	86864884	chr7:86643913-86864884	3	+	86765145	86864355	0	6	959,608,856,1067,175,603,	0,121092,142347,194925,206456,220368,
#Partially deleted in new
chr7	86644533	86786691	chr7:86644533-86786691	0	+	86644788	86786691	789624	2	339,431,	0,141727,
#Partially deleted in new
chr7	86644841	86864422	chr7:86644841-86864422	1	+	86765145	86864396	0	5	31,608,856,175,141,	0,120164,141419,205528,219440,
#Partially deleted in new
chr7	86644844	86765406	chr7:86644844-86765406	0	+	86765145	86765406	789624	2	127,401,	0,120161,
#Partially deleted in new
chr7	86710098	86765389	chr7:86710098-86765389	0	+	86765145	86765389	789624	2	107,384,	0,54907,
#Partially deleted in new
chr7	86775080	86776022	chr7:86775080-86776022	3	-	86775080	86775080	8553170	2	191,78,	0,864,
#Partially deleted in new
chr7	86784225	86786592	chr7:86784225-86786592	3	-	86784225	86784225	8553170	3	432,91,164,	0,1831,2203,
#Partially deleted in new
chr7	86784378	86786670	chr7:86784378-86786670	0	-	86784378	86784378	8553170	2	279,401,	0,1891,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr7	86876905	87059699	chr7:86876905-87059699	3	-	86880470	87059513	789624	22	3625,166,179,127,102,97,190,174,264,138,103,91,129,181,89,153,106,87,148,196,121,375,	0,14818,16016,20600,30764,31541,32906,35166,36035,37817,41536,42314,48622,49830,61220,61902,63104,65112,67993,70821,87998,182419,
#Partially deleted in new
chr7	86879938	87059631	chr7:86879938-87059631	1	-	86880470	87059513	789624	22	592,166,179,127,102,97,190,100,125,138,103,91,129,181,89,153,106,87,148,196,121,307,	0,11785,12983,17567,27731,28508,29873,32133,33002,34784,38503,39281,45589,46797,58187,58869,60071,62079,64960,67788,84965,179386,
#Partially deleted in new
chr7	86880015	86945046	chr7:86880015-86945046	0	-	86941364	86945046	789624	20	515,166,179,127,102,97,190,174,264,138,103,91,129,181,89,153,106,34,87,148,	0,11708,12906,17490,27654,28431,29796,32056,32925,34707,38426,39204,45512,46720,58110,58792,59994,61336,62002,64883,
#Partially deleted in new
chr7	86880076	86965888	chr7:86880076-86965888	1	-	86880470	86964908	789624	21	454,166,179,127,102,97,190,174,264,138,103,91,129,181,89,153,106,87,148,121,80,	0,11647,12845,17429,27593,28370,29735,31995,32864,34646,38365,39143,45451,46659,58049,58731,59933,61941,64822,84827,85732,
#Partially deleted in new
chr7	86891194	86892935	chr7:86891194-86892935	0	-	86891194	86891194	8553170	2	695,14,	0,1727,
#Partially deleted in new
chr7	86891723	87059515	chr7:86891723-87059515	0	-	86891723	87059515	789624	20	166,179,127,102,97,190,174,264,138,103,91,129,181,89,153,106,87,148,196,191,	0,1198,5782,15946,16723,18088,20348,21217,22999,26718,27496,33804,35012,46402,47084,48286,50294,53175,56003,167601,
#Partially deleted in new
chr7	86907696	86912202	chr7:86907696-86912202	0	-	86909967	86912202	789624	5	75,97,190,74,131,	0,750,2115,3925,4375,
#Partially deleted in new
chr7	86911824	86913160	chr7:86911824-86913160	0	-	86911824	86911824	8553170	2	421,220,	0,1116,
#Partially deleted in new
chr7	86913015	86919824	chr7:86913015-86919824	0	-	86913015	86913015	8553170	5	189,138,103,91,117,	0,1707,5426,6204,6692,
#Partially deleted in new
chr7	86942080	86965882	chr7:86942080-86965882	0	-	86942080	86947890	789624	5	24,148,196,121,74,	0,2818,5646,22823,23728,
#Partially deleted in new
chr7	86944949	86965975	chr7:86944949-86965975	0	-	86944949	86947890	789624	4	97,196,121,162,	0,2777,19954,20864,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	87109538	87111282	chr7:87109538-87111282	3	+	87109538	87109538	8553170	1	1744,	0,
#Partially deleted in new
chr7	87151422	87152282	chr7:87151422-87152282	3	-	87151422	87151422	789624	2	236,533,	0,327,
#Partially deleted in new
chr7	87151439	87152420	chr7:87151439-87152420	0	-	87151439	87151439	789624	2	219,119,	0,862,
#Partially deleted in new
chr7	87152360	87196332	chr7:87152360-87196332	3	+	87164941	87195140	0	18	195,123,117,123,95,115,77,158,33,110,229,152,210,83,156,378,145,1302,	0,11134,12573,14122,18634,21174,22232,27184,28948,29867,32036,33468,35731,38584,40837,41364,42323,42670,
#Partially deleted in new
chr7	87152408	87196337	chr7:87152408-87196337	1	+	87164941	87195140	789624	17	147,123,117,123,95,115,77,158,33,110,229,152,83,156,378,145,1307,	0,11086,12525,14074,18586,21126,22184,27136,28900,29819,31988,33420,38536,40789,41316,42275,42622,
#Partially deleted in new
chr7	87152411	87196325	chr7:87152411-87196325	0	+	87164941	87182164	0	18	144,123,117,123,95,115,77,158,33,321,229,152,210,83,156,378,145,1295,	0,11083,12522,14071,18583,21123,22181,27133,28897,29605,31985,33417,35680,38533,40786,41313,42272,42619,
#Partially deleted in new
chr7	87152411	87196325	chr7:87152411-87196325	0	+	87164941	87182164	0	18	144,123,117,123,95,115,77,158,33,282,229,152,210,83,156,378,145,1295,	0,11083,12522,14071,18583,21123,22181,27133,28897,29644,31985,33417,35680,38533,40786,41313,42272,42619,
#Partially deleted in new
chr7	87152425	87196323	chr7:87152425-87196323	0	+	87164941	87182164	0	17	130,123,117,95,115,77,158,33,321,229,152,263,83,156,378,145,1293,	0,11069,12508,18569,21109,22167,27119,28883,29591,31971,33403,35613,38519,40772,41299,42258,42605,
#Partially deleted in new
chr7	87152425	87171017	chr7:87152425-87171017	0	+	87164941	87171017	789624	6	130,94,123,117,123,23,	0,10813,11069,12508,14057,18569,
#Partially deleted in new
chr7	87152435	87171057	chr7:87152435-87171057	0	+	87171026	87171057	789624	5	120,139,123,123,63,	0,1954,11059,14047,18559,
#Partially deleted in new
chr7	87152439	87166520	chr7:87152439-87166520	0	+	87164941	87166520	789624	6	116,139,94,123,117,38,	0,1950,10799,11055,12494,14043,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr7	87152447	87196325	chr7:87152447-87196325	0	+	87164941	87185843	789624	18	108,117,123,95,115,77,158,33,110,229,73,152,210,83,156,378,145,1295,	0,12486,14035,18547,21087,22145,27097,28861,29780,31949,32372,33381,35644,38497,40750,41277,42236,42583,
#Partially deleted in new
chr7	87152449	87196332	chr7:87152449-87196332	0	+	87164941	87188217	789624	17	106,123,117,95,115,77,158,33,110,229,152,104,83,156,378,145,1302,	0,11045,12484,18545,21085,22143,27095,28859,29778,31947,33379,35748,38495,40748,41275,42234,42581,
#Partially deleted in new
chr7	87152451	87171034	chr7:87152451-87171034	0	+	87164941	87171034	789624	6	104,123,78,117,123,40,	0,11043,11802,12482,14031,18543,
#Partially deleted in new
chr7	87152452	87165023	chr7:87152452-87165023	0	+	87164941	87165023	789624	5	103,139,123,78,90,	0,1937,11042,11801,12481,
#Partially deleted in new
chr7	87152452	87179551	chr7:87152452-87179551	0	+	87164941	87179551	789624	7	103,117,123,95,115,77,7,	0,12481,14030,18542,21082,22140,27092,
#Partially deleted in new
chr7	87152452	87166521	chr7:87152452-87166521	0	+	87164941	87166521	789624	6	103,51,139,123,117,39,	0,1775,1937,11042,12481,14030,
#Partially deleted in new
chr7	87152452	87173617	chr7:87152452-87173617	0	+	87164941	87173617	789624	7	103,139,123,117,123,95,83,	0,1937,11042,12481,14030,18542,21082,
#Partially deleted in new
chr7	87152467	87195166	chr7:87152467-87195166	1	+	87171026	87195140	0	17	88,123,123,95,115,77,158,33,110,229,152,210,83,156,378,145,136,	0,11027,14015,18527,21067,22125,27077,28841,29760,31929,33361,35624,38477,40730,41257,42216,42563,
#Partially deleted in new
chr7	87152497	87191027	chr7:87152497-87191027	0	+	87164941	87182164	0	13	58,123,117,123,95,115,77,158,33,282,229,152,83,	0,10997,12436,13985,18497,21037,22095,27047,28811,29558,31899,33331,38447,
#Partially deleted in new
chr7	87152530	87166592	chr7:87152530-87166592	0	+	87164941	87166592	789624	6	25,139,43,123,117,110,	0,1859,2924,10964,12403,13952,
#Partially deleted in new
chr7	87152545	87166493	chr7:87152545-87166493	0	+	87164941	87166493	789624	7	10,51,139,94,123,117,11,	0,1682,1844,10693,10949,12388,13937,
#Partially deleted in new
chr7	87152553	87196332	chr7:87152553-87196332	1	+	87164941	87195140	0	20	242,51,139,123,117,123,95,115,77,158,33,110,229,152,210,83,156,378,145,1302,	0,1674,1836,10941,12380,13929,18441,20981,22039,26991,28755,29674,31843,33275,35538,38391,40644,41171,42130,42477,
#Partially deleted in new
chr7	87152555	87163539	chr7:87152555-87163539	0	+	87152555	87152555	8553170	5	240,51,139,94,45,	0,1672,1834,10683,10939,
#Partially deleted in new
chr7	87152612	87163564	chr7:87152612-87163564	0	+	87152612	87152612	8553170	4	332,139,94,70,	0,1777,10626,10882,
#Partially deleted in new
chr7	87152628	87164989	chr7:87152628-87164989	0	+	87164941	87164989	789624	5	167,139,94,123,56,	0,1761,10610,10866,12305,
#Partially deleted in new
chr7	87152630	87171051	chr7:87152630-87171051	0	+	87164941	87171051	789624	5	161,123,117,123,57,	0,10864,12303,13852,18364,
#Partially deleted in new
chr7	87154456	87155559	chr7:87154456-87155559	0	+	87154456	87154456	8553170	2	72,105,	0,998,
#Partially deleted in new
chr7	87162797	87165045	chr7:87162797-87165045	0	+	87164941	87165045	789624	3	535,123,112,	0,697,2136,
#Partially deleted in new
chr7	87162881	87196323	chr7:87162881-87196323	0	+	87164941	87182164	0	18	736,78,117,123,95,115,77,158,33,282,229,152,210,83,156,378,145,1293,	0,1372,2052,3601,8113,10653,11711,16663,18427,19174,21515,22947,25210,28063,30316,30843,31802,32149,
#Partially deleted in new
chr7	87163219	87179599	chr7:87163219-87179599	0	+	87164941	87179599	789624	7	398,117,123,95,115,77,55,	0,1714,3263,7775,10315,11373,16325,
#Partially deleted in new
chr7	87163238	87163617	chr7:87163238-87163617	0	+	87163238	87163238	8553170	2	48,123,	0,256,
#Partially deleted in new
chr7	87181195	87185933	chr7:87181195-87185933	0	+	87181195	87181195	8553170	4	146,110,229,105,	0,1032,3201,4633,
#Partially deleted in new
chr7	87182197	87186021	chr7:87182197-87186021	0	+	87182197	87182197	8553170	3	140,229,193,	0,2199,3631,
#Partially deleted in new
chr7	87182246	87186175	chr7:87182246-87186175	0	+	87182246	87182246	8553170	2	91,347,	0,3582,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	87184848	87185020	chr7:87184848-87185020	3	+	87184848	87184848	8553170	1	172,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	87185995	87193301	chr7:87185995-87193301	0	+	87185995	87185995	8553170	3	2306,83,104,	0,4949,7202,
#Partially deleted in new
chr7	87188092	87193493	chr7:87188092-87193493	0	+	87188092	87188092	8553170	3	209,83,296,	0,2852,5105,
#Partially deleted in new
chr7	87192476	87196139	chr7:87192476-87196139	0	+	87192476	87192476	8553170	4	877,378,145,1109,	0,1248,2207,2554,
#Partially deleted in new
chr7	87193300	87195757	chr7:87193300-87195757	0	+	87193300	87195129	789624	3	53,378,727,	0,424,1730,
#Partially deleted in new
chr7	87193724	87194892	chr7:87193724-87194892	0	+	87193724	87194842	789624	2	378,209,	0,959,
#Partially deleted in new
chr7	87193953	87196323	chr7:87193953-87196323	0	+	87193953	87193953	8553170	1	2370,	0,
#Partially deleted in new
chr7	87196159	87219733	chr7:87196159-87219733	1	-	87196635	87219503	789624	4	599,105,51,308,	0,1781,2847,23266,
#Partially deleted in new
chr7	87196161	87220587	chr7:87196161-87220587	3	-	87196635	87219503	789624	5	597,105,51,293,227,	0,1779,2845,23264,24199,
#Partially deleted in new
chr7	87196599	87216921	chr7:87196599-87216921	0	-	87196599	87196599	8553170	4	159,105,51,182,	0,1341,2407,20140,
#Partially deleted in new
chr7	87197700	87219630	chr7:87197700-87219630	1	-	87197814	87219503	789624	3	345,51,205,	0,1306,21725,
#Partially deleted in new
chr7	87197717	87203043	chr7:87197717-87203043	0	-	87197717	87197717	8553170	3	328,51,80,	0,1289,5246,
#Partially deleted in new
chr7	87197982	87199613	chr7:87197982-87199613	0	-	87197982	87197982	8553170	2	63,607,	0,1024,
#Partially deleted in new
chr7	87198227	87219626	chr7:87198227-87219626	0	-	87198227	87198227	8553170	2	830,201,	0,21198,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	87218610	87218712	chr7:87218610-87218712	3	-	87218610	87218610	8553170	1	102,	0,
#Partially deleted in new
chr7	87219488	87220530	chr7:87219488-87220530	0	-	87219488	87219503	8553170	2	230,314,	0,728,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	87325224	87345515	chr7:87325224-87345515	0	-	87325224	87325224	8553170	3	220,162,473,	0,16298,19818,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	87325298	87345515	chr7:87325298-87345515	3	-	87325298	87325298	8553170	4	146,162,191,211,	0,16224,19744,20006,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	87325346	87345463	chr7:87325346-87345463	1	-	87325346	87325346	8553170	3	98,330,421,	0,16008,19696,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	87325349	87345486	chr7:87325349-87345486	0	-	87325349	87325349	8553170	3	95,162,182,	0,16173,19955,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	87325349	87345486	chr7:87325349-87345486	0	-	87325349	87325349	5263520	3	95,162,253,	0,16173,19884,
#Partially deleted in new
chr7	87341401	87345515	chr7:87341401-87345515	0	-	87341401	87341401	8553170	3	283,191,211,	0,3641,3903,
#Partially deleted in new
chr7	87341469	87345486	chr7:87341469-87345486	0	-	87341469	87341469	8553170	2	215,253,	0,3764,
#Partially deleted in new
chr7	87345081	87345233	chr7:87345081-87345233	3	+	87345081	87345081	8553170	1	152,	0,
#Partially deleted in new
chr7	87345304	87345486	chr7:87345304-87345486	3	+	87345304	87345304	8553170	1	182,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr7	87345680	87399481	chr7:87345680-87399481	1	+	87349068	87398644	789624	19	87,91,136,84,125,182,125,109,94,126,102,84,108,131,124,79,94,120,958,	0,659,3367,11826,13525,15709,16047,23695,29951,30147,31668,36229,36393,36732,45908,46885,47049,47267,52843,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	87345692	87360116	chr7:87345692-87360116	1	+	87349068	87359354	789624	4	75,91,136,911,	0,647,3355,13513,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr7	87345694	87399795	chr7:87345694-87399795	3	+	87349068	87398644	789624	18	73,91,136,125,182,125,109,94,126,102,84,108,131,124,79,94,120,1272,	0,645,3353,13511,15695,16033,23681,29937,30133,31654,36215,36379,36718,45894,46871,47035,47253,52829,
#Partially deleted in new
chr7	87346334	87398474	chr7:87346334-87398474	1	+	87349068	87398323	789624	17	96,136,125,182,125,109,94,126,102,84,108,131,124,79,94,120,158,	0,2713,12871,15055,15393,23041,29297,29493,31014,35575,35739,36078,45254,46231,46395,46613,51982,
#Partially deleted in new
chr7	87361442	87369696	chr7:87361442-87369696	0	+	87361442	87361442	8553170	3	129,125,321,	0,285,7933,
#Partially deleted in new
chr7	87375234	87375889	chr7:87375234-87375889	0	+	87375234	87375234	8553170	2	491,62,	0,593,
#Partially deleted in new
chr7	87375872	87382329	chr7:87375872-87382329	0	+	87375872	87375872	8553170	4	81,102,84,256,	0,1476,6037,6201,
#Partially deleted in new
chr7	87401696	87403201	chr7:87401696-87403201	0	-	87401921	87403201	789624	3	282,174,67,	0,432,1438,
#Partially deleted in new
chr7	87401698	87475659	chr7:87401698-87475659	1	-	87402095	87475465	789624	28	604,147,207,198,157,141,101,204,84,78,105,147,171,162,171,204,126,111,114,172,125,172,192,58,151,55,86,26,	0,1436,4589,6338,7537,10194,11918,15613,16838,18299,20422,22207,25051,29705,37968,38500,41620,41964,43163,45335,48269,49924,51245,52836,61059,70922,73687,73935,
#Partially deleted in new
chr7	87402044	87475703	chr7:87402044-87475703	1	-	87402095	87475465	789624	27	258,147,207,198,157,101,204,84,78,105,147,171,162,171,204,126,111,114,172,125,172,192,58,151,55,86,70,	0,1090,4243,5992,7191,11572,15267,16492,17953,20076,21861,24705,29359,37622,38154,41274,41618,42817,44989,47923,49578,50899,52490,60713,70576,73341,73589,
#Partially deleted in new
chr7	87402048	87475739	chr7:87402048-87475739	3	-	87402095	87475465	789624	28	254,147,228,198,157,141,101,204,84,78,105,147,171,162,171,204,126,111,114,172,125,172,192,58,151,55,86,106,	0,1086,4239,5988,7187,9844,11568,15263,16488,17949,20072,21857,24701,29355,37618,38150,41270,41614,42813,44985,47919,49574,50895,52486,60709,70572,73337,73585,
#Partially deleted in new
chr7	87402058	87475848	chr7:87402058-87475848	1	-	87402095	87475465	789624	28	244,147,207,198,157,141,101,204,84,78,105,147,171,162,171,204,126,111,114,172,125,172,192,58,151,55,86,78,	0,1076,4229,5978,7177,9834,11558,15253,16478,17939,20062,21847,24691,29345,37608,38140,41260,41604,42803,44975,47909,49564,50885,52476,60699,70562,73327,73712,
#Partially deleted in new
chr7	87402095	87475465	chr7:87402095-87475465	1	-	87402095	87475465	789624	26	207,147,207,198,157,101,204,84,78,105,147,171,162,171,204,126,111,114,172,125,172,192,58,151,55,80,	0,1039,4192,5941,7140,11521,15216,16441,17902,20025,21810,24654,29308,37571,38103,41223,41567,42766,44938,47872,49527,50848,52439,60662,70525,73290,
#Partially deleted in new
chr7	87402133	87403379	chr7:87402133-87403379	0	-	87402133	87402133	8553170	2	169,245,	0,1001,
#Deleted in new
chr7	87405919	87408234	chr7:87405919-87408234	0	-	87405919	87405919	8553170	2	596,198,	0,2117,
#Partially deleted in new
chr7	87423574	87431500	chr7:87423574-87431500	0	-	87423574	87423574	8553170	3	478,171,97,	0,3175,7829,
#Partially deleted in new
chr7	87423848	87475408	chr7:87423848-87475408	0	-	87448687	87475408	789624	17	204,171,162,171,204,126,111,114,172,73,125,172,192,58,151,55,23,	0,2901,7555,15818,16350,19470,19814,21013,23185,24785,26119,27774,29095,30686,38909,48772,51537,
#Partially deleted in new
chr7	87426821	87475658	chr7:87426821-87475658	0	-	87451794	87475465	789624	17	99,162,171,204,126,111,114,172,73,125,188,192,58,151,55,86,25,	0,4582,12845,13377,16497,16841,18040,20212,21812,23146,24801,26122,27713,35936,45799,48564,48812,
#Partially deleted in new
chr7	87452371	87475472	chr7:87452371-87475472	0	-	87452371	87452371	8553170	5	764,58,151,55,87,	0,2163,10386,20249,23014,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	87462860	87480435	chr7:87462860-87480435	0	-	87462860	87475465	789624	7	48,55,86,143,58,340,1277,	0,9760,12525,13272,14133,14347,16298,
#Partially deleted in new
chr7	87503632	87601073	chr7:87503632-87601073	1	-	87504242	87600184	0	28	817,147,207,198,157,141,101,204,84,78,108,147,177,162,171,204,126,111,114,172,125,172,192,52,169,49,74,319,	0,2264,5642,11598,12876,15693,17143,27661,32825,35635,37724,40496,41190,42230,45715,46218,46538,46835,47092,50128,57630,62437,63152,66539,81879,92133,96484,97122,
#Partially deleted in new
chr7	87503858	87713248	chr7:87503858-87713248	3	-	87504242	87600184	0	29	591,147,207,198,157,141,101,204,84,78,108,147,177,162,171,204,126,111,114,172,125,172,192,52,169,49,74,324,88,	0,2038,5416,11372,12650,15467,16917,27435,32599,35409,37498,40270,40964,42004,45489,45992,46312,46609,46866,49902,57404,62211,62926,66313,81653,91907,96258,96896,209302,
#Partially deleted in new
chr7	87503862	87713323	chr7:87503862-87713323	1	-	87504242	87600184	0	28	587,147,207,198,157,141,101,204,84,78,108,147,177,162,171,204,126,111,114,172,125,172,52,169,49,74,324,163,	0,2034,5412,11368,12646,15463,16913,27431,32595,35405,37494,40266,40960,42000,45485,45988,46308,46605,46862,49898,57400,62207,66309,81649,91903,96254,96892,209298,
#Partially deleted in new
chr7	87503863	87531697	chr7:87503863-87531697	0	-	87503863	87503863	8553170	9	586,147,207,198,157,141,101,204,123,	0,2033,5411,11367,12645,15462,16912,27430,27711,
#Partially deleted in new
chr7	87504155	87506141	chr7:87504155-87506141	0	-	87504155	87504155	8553170	2	294,245,	0,1741,
#Partially deleted in new
chr7	87505901	87518963	chr7:87505901-87518963	0	-	87505901	87505901	8553170	5	142,207,198,157,83,	0,3373,9329,10607,12979,
#Partially deleted in new
chr7	87515227	87537062	chr7:87515227-87537062	0	-	87515227	87515227	8553170	7	201,157,141,101,204,84,25,	0,1281,4098,5548,16066,21230,21810,
#Partially deleted in new
chr7	87516508	87521119	chr7:87516508-87521119	0	-	87516508	87516508	8553170	3	157,141,344,	0,2817,4267,
#Deleted in new
chr7	87521460	87522410	chr7:87521460-87522410	7	+	87521460	87521460	16724991	1	950,	0,
#Partially deleted in new
chr7	87545948	87550158	chr7:87545948-87550158	0	-	87545948	87545948	8553170	3	76,171,308,	0,3399,3902,
#Partially deleted in new
chr7	87585653	87713294	chr7:87585653-87713294	0	-	87585653	87600184	789624	6	27,49,74,71,106,134,	0,10112,14463,15101,15319,127507,
#Partially deleted in new
chr7	87600812	87713295	chr7:87600812-87713295	0	-	87600812	87600812	8553170	3	266,181,135,	0,2147,112348,
#Partially deleted in new
chr7	87627547	87741537	chr7:87627547-87741537	0	+	87627547	87627547	8553170	7	66,116,51,134,86,90,39,	0,23274,66360,72873,83022,112243,113951,
#Partially deleted in new
chr7	87627671	87700550	chr7:87627671-87700550	0	+	87627671	87627671	8553170	3	185,116,130,	0,23150,72749,
#Partially deleted in new
chr7	87628412	87832296	chr7:87628412-87832296	1	+	87628823	87830030	789624	12	533,116,51,134,86,90,81,169,158,147,122,2412,	0,22409,65495,72008,82157,111378,113086,142168,149385,178960,187728,201472,
#Partially deleted in new
chr7	87628449	87700572	chr7:87628449-87700572	0	+	87628449	87628449	8553170	3	496,116,152,	0,22372,71971,
#Partially deleted in new
chr7	87628453	87830456	chr7:87628453-87830456	1	+	87628823	87830030	789624	10	492,116,134,86,90,81,169,158,122,572,	0,22368,71967,82116,111337,113045,142127,149344,187687,201431,
#Partially deleted in new
chr7	87628614	87830514	chr7:87628614-87830514	3	+	87628823	87830030	789624	11	331,116,134,86,90,81,169,158,147,122,630,	0,22207,71806,81955,111176,112884,141966,149183,178758,187526,201270,
#Partially deleted in new
chr7	87629229	87741576	chr7:87629229-87741576	0	+	87629229	87629229	8553170	6	79,116,134,86,90,78,	0,21592,71191,81340,110561,112269,
#Partially deleted in new
chr7	87700415	87832293	chr7:87700415-87832293	0	+	87700415	87700415	8553170	8	139,86,90,81,169,158,122,2409,	0,10154,39375,41083,70165,77382,115725,129469,
#Partially deleted in new
chr7	87709249	87770657	chr7:87709249-87770657	0	+	87709249	87709249	8553170	5	258,86,90,81,77,	0,1320,30541,32249,61331,
#Partially deleted in new
chr7	87833567	87876349	chr7:87833567-87876349	3	-	87836248	87858727	789624	12	2794,81,82,110,174,125,68,107,60,121,69,254,	0,3162,8065,10186,13381,14285,16313,20636,22724,25063,27004,42528,
#Partially deleted in new
chr7	87836109	87843864	chr7:87836109-87843864	0	-	87842035	87843861	789624	5	252,81,82,110,111,	0,620,5523,5822,7644,
#Partially deleted in new
chr7	87836110	87841741	chr7:87836110-87841741	0	-	87836110	87836110	8553170	3	251,81,109,	0,619,5522,
#Partially deleted in new
chr7	87836167	87860598	chr7:87836167-87860598	0	-	87856375	87858727	789624	10	194,81,82,174,125,68,107,98,121,27,	0,562,5465,10781,11685,13713,18036,20124,22463,24404,
#Partially deleted in new
chr7	87836248	87842267	chr7:87836248-87842267	0	-	87836248	87836248	8553170	2	113,635,	0,5384,
#Deleted in new
chr7	87836296	87837147	chr7:87836296-87837147	0	-	87836296	87836296	8553170	2	65,418,	0,433,
#Partially deleted in new
chr7	87856290	87876305	chr7:87856290-87876305	0	-	87856290	87856290	8553170	4	99,121,69,210,	0,2340,4281,19805,
#Partially deleted in new
chr7	87876215	87908376	chr7:87876215-87908376	0	+	87876732	87900306	0	12	563,173,180,51,70,77,37,46,68,115,125,1189,	0,1837,8763,10628,11113,11767,20258,21078,24066,24548,28076,30972,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	87876228	87909541	chr7:87876228-87909541	3	+	87876732	87908163	0	12	550,173,180,51,70,77,37,46,129,115,125,2354,	0,1824,8750,10615,11100,11754,20245,21065,23992,24535,28063,30959,
#Deleted in new
chr7	87876486	87878557	chr7:87876486-87878557	0	+	87876486	87876486	8553170	2	292,505,	0,1566,
#Partially deleted in new
chr7	87876533	87908373	chr7:87876533-87908373	0	+	87876732	87884986	789624	12	245,81,180,51,70,77,37,46,129,115,125,1186,	0,1519,8445,10310,10795,11449,19940,20760,23687,24230,27758,30654,
#Partially deleted in new
chr7	87876582	87885183	chr7:87876582-87885183	0	+	87876582	87876582	8553170	3	196,173,205,	0,1470,8396,
#Partially deleted in new
chr7	87876599	87907386	chr7:87876599-87907386	0	+	87876732	87900301	789624	11	179,173,180,51,70,77,37,68,115,125,199,	0,1453,8379,10244,10729,11383,19874,23682,24164,27692,30588,
#Partially deleted in new
chr7	87887967	87907219	chr7:87887967-87907219	0	+	87887967	87887967	8553170	7	92,37,46,129,115,125,32,	0,8506,9326,12253,12796,16324,19220,
#Partially deleted in new
chr7	87896182	87900815	chr7:87896182-87900815	0	+	87896182	87896182	8553170	4	328,43,129,52,	0,1114,4038,4581,
#Partially deleted in new
chr7	87934142	88202889	chr7:87934142-88202889	1	+	87934465	88196491	0	30	408,161,77,67,83,64,70,71,75,72,167,85,91,52,100,72,93,81,51,64,106,120,169,115,91,18,101,67,124,6419,	0,883,44193,141483,174033,180441,182602,191446,194459,196245,197126,198724,200186,201837,208883,210982,211272,214834,216838,217114,219078,221744,228869,231689,233994,237401,247362,247815,258973,262328,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	87934250	88132804	chr7:87934250-88132804	1	+	87934465	88131472	789624	11	300,161,77,67,83,64,70,71,75,72,1536,	0,775,44085,141375,173925,180333,182494,191338,194351,196137,197018,
#Partially deleted in new
chr7	87934328	88114648	chr7:87934328-88114648	0	+	87934465	88114648	789624	7	222,161,51,77,67,83,65,	0,697,30305,44007,141297,173847,180255,
#Partially deleted in new
chr7	87934346	88182113	chr7:87934346-88182113	1	+	87934465	88182028	0	29	204,161,77,67,83,64,70,71,75,72,167,85,91,52,100,72,93,81,51,64,106,120,169,115,91,18,108,101,156,	0,679,43989,141279,173829,180237,182398,191242,194255,196041,196922,198520,199982,201633,208679,210778,211068,214630,216634,216910,218874,221540,228665,231485,233790,237197,244588,247158,247611,
#Partially deleted in new
chr7	87934386	88196582	chr7:87934386-88196582	1	+	87934465	88196491	0	31	164,161,77,67,83,64,70,71,75,72,167,85,91,52,100,72,93,81,51,64,106,120,169,115,91,18,108,101,67,124,112,	0,639,43949,141239,173789,180197,182358,191202,194215,196001,196882,198480,199942,201593,208639,210738,211028,214590,216594,216870,218834,221500,228625,231445,233750,237157,244548,247118,247571,258729,262084,
#Partially deleted in new
chr7	87934419	88202889	chr7:87934419-88202889	3	+	87934465	88196491	0	31	131,161,77,67,83,64,70,71,75,72,167,85,91,52,100,72,93,81,51,64,106,120,169,115,91,18,101,67,87,124,6419,	0,606,43916,141206,173756,180164,182325,191169,194182,195968,196849,198447,199909,201560,208606,210705,210995,214557,216561,216837,218801,221467,228592,231412,233717,237124,247085,247538,252195,258696,262051,
#Partially deleted in new
chr7	87934755	88181608	chr7:87934755-88181608	0	+	87935039	88181608	789624	27	431,77,67,83,64,70,71,75,72,167,85,91,52,100,72,93,81,51,64,106,120,169,115,91,18,108,104,	0,43580,140870,173420,179828,181989,190833,193846,195632,196513,198111,199573,201224,208270,210369,210659,214221,216225,216501,218465,221131,228256,231076,233381,236788,244179,246749,
#Partially deleted in new
chr7	88089918	88130439	chr7:88089918-88130439	0	+	88089918	88089918	8553170	7	96,83,64,70,71,75,52,	0,18257,24665,26826,35670,38683,40469,
#Partially deleted in new
chr7	88163030	88196757	chr7:88163030-88196757	0	+	88163030	88196491	789624	11	150,115,91,18,108,101,67,111,87,124,287,	0,2801,5106,8513,15904,18474,18927,21261,23584,30085,33440,
#Partially deleted in new
chr7	88165857	88196491	chr7:88165857-88196491	0	+	88165857	88196491	789624	9	89,91,18,195,101,67,87,124,21,	0,2279,5686,13077,15647,16100,20757,27258,30613,
#Deleted in new
chr7	88182004	88186422	chr7:88182004-88186422	0	+	88182004	88182004	8553170	2	20,593,	0,3825,
#Partially deleted in new
chr7	88205117	88220079	chr7:88205117-88220079	3	-	88206477	88220026	0	8	1387,59,114,148,44,70,84,104,	0,3389,4221,4865,5764,12004,13741,14858,
#Partially deleted in new
chr7	88205657	88220036	chr7:88205657-88220036	1	-	88206477	88220026	789624	8	847,59,94,48,44,70,84,61,	0,2849,3681,4425,5224,11464,13201,14318,
#Partially deleted in new
chr7	88206285	88210493	chr7:88206285-88210493	0	-	88206285	88206285	8553170	4	219,59,114,511,	0,2221,3053,3697,
#Partially deleted in new
chr7	88206437	88226976	chr7:88206437-88226976	1	-	88206477	88226914	789624	7	67,59,114,148,44,70,68,	0,2069,2901,3545,4444,10684,20471,
#Partially deleted in new
chr7	88206455	88226993	chr7:88206455-88226993	1	-	88206477	88226914	0	8	49,59,114,148,44,70,84,85,	0,2051,2883,3527,4426,10666,12403,20453,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	88207675	88226976	chr7:88207675-88226976	1	-	88208488	88226914	0	7	890,114,148,44,70,84,68,	0,1663,2307,3206,9446,11183,19233,
#Partially deleted in new
chr7	88208488	88220065	chr7:88208488-88220065	0	-	88214922	88220026	789624	8	77,114,148,44,142,70,84,90,	0,850,1494,2393,6306,8633,10370,11487,
#Partially deleted in new
chr7	88208859	88220060	chr7:88208859-88220060	0	-	88208859	88208859	8553170	6	593,148,44,70,84,85,	0,1123,2022,8262,9999,11116,
#Partially deleted in new
chr7	88210554	88220038	chr7:88210554-88220038	0	-	88210554	88210554	8553170	4	371,70,84,63,	0,6567,8304,9421,
#Partially deleted in new
chr7	88210567	88226953	chr7:88210567-88226953	0	-	88210567	88210567	8553170	4	358,70,84,45,	0,6554,8291,16341,
#Partially deleted in new
chr7	88216659	88219226	chr7:88216659-88219226	3	+	88216659	88216659	789624	2	98,478,	0,2089,
#Partially deleted in new
chr7	88219358	88277203	chr7:88219358-88277203	1	+	88219358	88219358	8553170	3	128,108,248,	0,52404,57597,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	88229658	88231774	chr7:88229658-88231774	1	+	88229658	88229658	8553170	2	302,475,	0,1641,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	88239417	88292260	chr7:88239417-88292260	0	+	88239417	88239417	8553170	4	83,108,78,73,	0,32345,44414,52770,
#Partially deleted in new
chr7	88243772	88292333	chr7:88243772-88292333	0	+	88243772	88243772	8553170	6	105,118,108,214,78,146,	0,15936,27990,33183,40059,48415,
#Partially deleted in new
chr7	88243784	88292352	chr7:88243784-88292352	0	+	88243784	88243784	8553170	5	93,214,271,78,165,	0,33171,38811,40047,48403,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	88270891	88306891	chr7:88270891-88306891	3	-	88279397	88284269	789624	5	8737,165,528,458,100,	0,10023,11749,12922,35900,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	88277000	88292988	chr7:88277000-88292988	1	+	88277000	88277000	8553170	3	169,78,801,	0,6831,15187,
#Partially deleted in new
chr7	88278027	88306888	chr7:88278027-88306888	1	-	88279397	88284269	789624	4	1601,165,458,97,	0,2887,5786,28764,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	88279572	88304367	chr7:88279572-88304367	1	+	88279572	88279572	8553170	5	79,258,78,123,332,	0,3036,4259,12615,24463,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	88281482	88306880	chr7:88281482-88306880	1	-	88282604	88284269	789624	4	1686,458,99,89,	0,2331,9433,25309,
#Partially deleted in new
chr7	88283165	88292260	chr7:88283165-88292260	0	+	88283165	88283165	8553170	2	744,73,	0,9022,
#Partially deleted in new
chr7	88283829	88298356	chr7:88283829-88298356	0	+	88283829	88283829	8553170	3	80,123,81,	0,8358,14446,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	88283829	88292692	chr7:88283829-88292692	0	+	88283829	88283829	8553170	3	80,132,505,	0,6462,8358,
#Deleted in new
chr7	88448787	88449017	chr7:88448787-88449017	7	-	88448787	88448787	16724991	1	230,	0,
#Deleted in new
chr7	88449091	88449231	chr7:88449091-88449231	3	-	88449091	88449091	8553170	1	140,	0,
#Deleted in new
chr7	88455308	88456191	chr7:88455308-88456191	7	+	88455308	88455308	16724991	1	883,	0,
#Deleted in new
chr7	88512028	88513187	chr7:88512028-88513187	7	-	88512028	88512028	16724991	1	1159,	0,
#Deleted in new
chr7	88564792	88566281	chr7:88564792-88566281	7	-	88564792	88564792	16724991	1	1489,	0,
#Partially deleted in new
chr7	88610240	88610669	chr7:88610240-88610669	7	-	88610240	88610240	16724991	1	429,	0,
#Deleted in new
chr7	88639013	88640416	chr7:88639013-88640416	7	+	88639013	88639013	16724991	1	1403,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	88710630	88756725	chr7:88710630-88756725	3	+	88710630	88710630	8553170	6	65,328,90,61,102,146,	0,22076,22934,31386,36607,45949,
#Deleted in new
chr7	88749469	88749694	chr7:88749469-88749694	7	+	88749469	88749469	16724991	1	225,	0,
#Partially deleted in new
chr7	88759367	89337032	chr7:88759367-89337032	3	+	88759976	89337032	789624	4	717,141,131,3670,	0,458787,567976,573995,
#Deleted in new
chr7	88794105	88795721	chr7:88794105-88795721	3	-	88794180	88794942	789624	2	941,82,	0,1534,
#Partially deleted in new
chr7	89218153	89337057	chr7:89218153-89337057	1	+	89327343	89337032	789624	3	142,131,3695,	0,109190,115209,
#Partially deleted in new
chr7	89443973	89494262	chr7:89443973-89494262	3	+	89443973	89443973	8553170	6	84,57,149,155,76,150,	0,25629,30921,46146,47661,50139,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	89754619	89754726	chr7:89754619-89754726	3	-	89754619	89754619	8553170	1	107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	89882352	90211635	chr7:89882352-90211635	3	-	89882352	89882352	789624	3	203,88,336,	0,327498,328947,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	90119298	90122890	chr7:90119298-90122890	3	-	90119298	90119298	8553170	2	282,296,	0,3296,
#Partially deleted in new
chr7	90119399	90125600	chr7:90119399-90125600	5	+	90119399	90119399	16724991	3	466,25,1527,	0,2667,4674,
#Partially deleted in new
chr7	90119538	90124163	chr7:90119538-90124163	7	+	90119538	90119538	16724991	3	327,25,90,	0,2528,4535,
#Partially deleted in new
chr7	90154374	90164827	chr7:90154374-90164827	3	+	90159788	90164734	789624	5	169,115,513,165,351,	0,5383,6430,7539,10102,
#Partially deleted in new
chr7	90154455	90162251	chr7:90154455-90162251	0	+	90154455	90154455	8553170	4	88,115,513,338,	0,5302,6349,7458,
#Partially deleted in new
chr7	90161265	90164829	chr7:90161265-90164829	0	+	90161265	90163060	789624	4	52,165,137,353,	0,648,1708,3211,
#Partially deleted in new
chr7	90167589	90227023	chr7:90167589-90227023	0	+	90225082	90227023	789624	3	324,525,53,	0,57460,59381,
#Deleted in new
chr7	90209269	90211635	chr7:90209269-90211635	0	-	90209269	90209269	8553170	2	669,336,	0,2030,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	90211685	90237631	chr7:90211685-90237631	1	+	90225082	90232624	789624	5	360,525,528,165,5295,	0,13364,15285,18186,20651,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	90211685	90237678	chr7:90211685-90237678	3	+	90225082	90232624	789624	6	360,113,525,528,165,5342,	0,4805,13364,15285,18186,20651,
#Partially deleted in new
chr7	90211743	90237678	chr7:90211743-90237678	1	+	90225082	90236922	789624	6	302,525,528,165,148,788,	0,13306,15227,18128,20593,25147,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	90211859	90237594	chr7:90211859-90237594	1	+	90225082	90232624	789624	6	75,61,525,528,165,5258,	0,416,13190,15111,18012,20477,
#Partially deleted in new
chr7	90211859	90237608	chr7:90211859-90237608	1	+	90225082	90236965	789624	6	75,61,525,528,165,718,	0,416,13190,15111,18012,25031,
#Partially deleted in new
chr7	90211872	90225346	chr7:90211872-90225346	0	+	90225082	90225346	789624	3	173,109,297,	0,4622,13177,
#Partially deleted in new
chr7	90211930	90238137	chr7:90211930-90238137	1	+	90225082	90238125	789624	5	115,525,528,165,39,	0,13119,15040,17941,26168,
#Partially deleted in new
chr7	90213819	90237631	chr7:90213819-90237631	1	+	90225082	90236922	789624	7	41,113,525,528,165,148,741,	0,2671,11230,13151,16052,18517,23071,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	90215273	90227033	chr7:90215273-90227033	0	+	90215273	90215273	8553170	3	1330,525,63,	0,9776,11697,
#Partially deleted in new
chr7	90245173	90311063	chr7:90245173-90311063	3	+	90245424	90310238	789624	23	371,60,66,110,77,99,150,178,124,49,122,217,165,119,119,82,193,138,77,198,87,105,996,	0,10249,12924,16773,20127,23112,26352,26607,28813,31899,32039,34503,37718,41107,43060,52575,54693,58795,59570,61727,62594,64089,64894,
#Partially deleted in new
chr7	90245194	90306905	chr7:90245194-90306905	0	+	90245424	90268289	789624	18	350,60,66,110,99,150,178,49,122,217,165,119,119,82,193,138,77,5,	0,10228,12903,16752,23091,26331,26586,31878,32018,34482,37697,41086,43039,52554,54672,58774,59549,61706,
#Partially deleted in new
chr7	90245194	90265367	chr7:90245194-90265367	0	+	90245194	90245194	8553170	4	350,60,66,67,	0,10228,12903,20106,
#Partially deleted in new
chr7	90245210	90304753	chr7:90245210-90304753	0	+	90245424	90273994	789624	20	334,60,66,110,77,99,150,124,132,49,122,217,165,119,248,119,82,193,138,10,	0,10212,12887,16736,20090,23075,26315,28776,30810,31862,32002,34466,37681,41070,42291,43023,52538,54656,58758,59533,
#Partially deleted in new
chr7	90245214	90310288	chr7:90245214-90310288	1	+	90245424	90310238	789624	23	330,60,66,110,77,45,150,178,124,49,122,217,165,119,119,82,193,138,77,198,87,105,221,	0,10208,12883,16732,20086,23071,26311,26566,28772,31858,31998,34462,37677,41066,43019,52534,54652,58754,59529,61686,62553,64048,64853,
#Partially deleted in new
chr7	90245424	90273994	chr7:90245424-90273994	0	+	90245424	90245424	8553170	8	120,60,66,104,77,99,150,8,	0,9998,12673,16522,19876,22861,26101,28562,
#Deleted in new
chr7	90251922	90252020	chr7:90251922-90252020	3	+	90251922	90251922	8553170	1	98,	0,
#Partially deleted in new
chr7	90258097	90300004	chr7:90258097-90300004	0	+	90258097	90300004	789624	13	66,110,77,99,150,178,124,217,165,119,119,82,39,	0,3849,7203,10188,13428,13683,15889,21579,24794,28183,30136,39651,41868,
#Deleted in new
chr7	90266033	90270216	chr7:90266033-90270216	3	-	90266033	90266033	8553170	3	133,29,127,	0,2875,4056,
#Deleted in new
chr7	90271588	90272219	chr7:90271588-90272219	0	+	90271588	90271962	789624	2	87,439,	0,192,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	90271902	90310388	chr7:90271902-90310388	0	+	90271902	90271902	8553170	15	56,124,49,122,217,165,119,248,119,82,4954,198,87,105,321,	0,2084,5170,5310,7774,10989,14378,15599,16331,25846,27964,34998,35865,37360,38165,
#Partially deleted in new
chr7	90279772	90310290	chr7:90279772-90310290	0	+	90279772	90310238	789624	11	121,165,119,119,82,193,77,198,87,105,223,	0,3119,6508,8461,17976,20094,24971,27128,27995,29490,30295,
#Partially deleted in new
chr7	90279788	90286449	chr7:90279788-90286449	0	+	90279788	90279788	8553170	3	105,165,169,	0,3103,6492,
#Partially deleted in new
chr7	90304035	90310300	chr7:90304035-90310300	0	+	90304035	90310238	789624	5	71,77,87,105,233,	0,708,3732,5227,6032,
#Partially deleted in new
chr7	90307076	90310569	chr7:90307076-90310569	0	+	90307076	90310238	789624	3	22,87,502,	0,691,2991,
#Partially deleted in new
chr7	90312495	90322592	chr7:90312495-90322592	3	+	90312495	90312495	8553170	3	305,64,364,	0,7862,9733,
#Deleted in new
chr7	90316502	90321308	chr7:90316502-90321308	3	-	90319328	90319748	789624	2	3249,628,	0,4178,
#Partially deleted in new
chr7	90340370	90377572	chr7:90340370-90377572	0	+	90340518	90355098	789624	6	154,194,145,74,53,66,	0,12445,14715,31784,33931,37136,
#Partially deleted in new
chr7	90340370	90377572	chr7:90340370-90377572	0	+	90340518	90377572	789624	7	154,194,92,145,74,53,66,	0,12445,14087,14715,31784,33931,37136,
#Partially deleted in new
chr7	90340370	90377572	chr7:90340370-90377572	0	+	90340518	90377572	789624	8	154,78,194,92,145,74,53,66,	0,1874,12445,14087,14715,31784,33931,37136,
#Partially deleted in new
chr7	90340370	90377575	chr7:90340370-90377575	0	+	90340518	90372186	789624	6	154,194,92,74,53,69,	0,12445,14087,31784,33931,37136,
#Deleted in new
chr7	90345872	90346218	chr7:90345872-90346218	3	-	90345872	90345872	8553170	1	346,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	90346664	90385890	chr7:90346664-90385890	1	+	90346741	90385154	789624	8	110,194,74,53,108,78,124,999,	0,6151,25490,27637,30842,31469,36291,38227,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	90346675	90391455	chr7:90346675-90391455	3	+	90346741	90385154	789624	10	99,194,92,145,74,53,108,78,124,6564,	0,6140,7782,8410,25479,27626,30831,31458,36280,38216,
#Partially deleted in new
chr7	90346694	90384937	chr7:90346694-90384937	0	+	90346741	90384937	789624	8	80,194,92,53,108,78,124,46,	0,6121,7763,27607,30812,31439,36261,38197,
#Partially deleted in new
chr7	90346701	90353232	chr7:90346701-90353232	0	+	90346701	90346701	8553170	2	73,417,	0,6114,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	90346706	90391013	chr7:90346706-90391013	0	+	90346741	90372186	789624	9	68,194,92,74,53,108,78,124,6122,	0,6109,7751,25448,27595,30800,31427,36249,38185,
#Partially deleted in new
chr7	90346729	90377614	chr7:90346729-90377614	0	+	90346741	90355098	789624	5	45,194,145,53,108,	0,6086,8356,27572,30777,
#Partially deleted in new
chr7	90354527	90385076	chr7:90354527-90385076	0	+	90354527	90354527	8553170	7	22,145,53,108,78,124,185,	0,558,19774,22979,23606,28428,30364,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	90383720	90413203	chr7:90383720-90413203	0	+	90412676	90413203	789624	5	67,347,90,99,560,	0,1171,21798,28242,28923,
#Partially deleted in new
chr7	90403352	90413411	chr7:90403352-90413411	0	+	90412676	90413408	789624	4	197,90,43,768,	0,2166,8654,9291,
#Partially deleted in new
chr7	90403385	90415954	chr7:90403385-90415954	3	+	90412676	90413411	789624	3	164,90,3311,	0,2133,9258,
#Partially deleted in new
chr7	90403389	90412480	chr7:90403389-90412480	0	+	90403389	90403389	8553170	3	160,90,474,	0,2129,8617,
#Partially deleted in new
chr7	90403433	90513391	chr7:90403433-90513391	3	+	90403433	90403433	8553170	4	116,94,47,114,	0,2085,75794,109844,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	90403437	90406080	chr7:90403437-90406080	0	+	90403437	90403437	8553170	2	112,562,	0,2081,
#Partially deleted in new
chr7	90403447	90413238	chr7:90403447-90413238	0	+	90412676	90413238	789624	4	102,94,55,595,	0,2071,8559,9196,
#Partially deleted in new
chr7	90403466	90415954	chr7:90403466-90415954	1	+	90412676	90413411	789624	3	83,94,3311,	0,2052,9177,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	90403483	90494416	chr7:90403483-90494416	0	+	90403483	90403483	8553170	6	66,90,104,63,47,50,	0,2035,62926,66407,75744,90883,
#Partially deleted in new
chr7	90403518	90513383	chr7:90403518-90513383	0	+	90403518	90403518	8553170	5	31,90,47,64,106,	0,2000,75709,90848,109759,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	90403535	90409184	chr7:90403535-90409184	0	+	90403535	90403535	8553170	3	14,90,238,	0,1983,5411,
#Partially deleted in new
chr7	90403566	90413055	chr7:90403566-90413055	0	+	90412676	90413055	789624	3	116,90,412,	0,1952,9077,
#Partially deleted in new
chr7	90405580	90513402	chr7:90405580-90513402	0	+	90405580	90405580	8553170	7	32,47,94,94,71,64,125,	0,73647,81746,83290,86658,88786,107697,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	90466409	90513371	chr7:90466409-90513371	0	+	90466409	90466409	8553170	4	104,47,64,94,	0,12818,27957,46868,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	90466423	90790628	chr7:90466423-90790628	0	+	90726581	90790628	789624	8	90,47,64,129,32,246,95,56,	0,12804,27943,97311,137794,260143,281257,324149,
#Partially deleted in new
chr7	90469786	90488964	chr7:90469786-90488964	7	+	90469786	90469786	16724991	4	145,47,94,94,	0,9441,17540,19084,
#Partially deleted in new
chr7	90494169	90513388	chr7:90494169-90513388	0	+	90494169	90494169	8553170	2	261,111,	0,19108,
#Partially deleted in new
chr7	90563773	90790628	chr7:90563773-90790628	0	+	90726581	90790628	789624	6	90,32,46,246,95,56,	0,40444,44756,162793,183907,226799,
#Partially deleted in new
chr7	90563773	90790627	chr7:90563773-90790627	0	+	90726581	90790627	789624	6	90,32,72,246,95,55,	0,40444,102566,162793,183907,226799,
#Partially deleted in new
chr7	90563773	90790628	chr7:90563773-90790628	0	+	90726581	90790628	789624	7	90,32,46,55,246,95,56,	0,40444,44756,152566,162793,183907,226799,
#Partially deleted in new
chr7	90563773	90790625	chr7:90563773-90790625	0	+	90563773	90563773	8553170	3	90,32,53,	0,40444,226799,
#Partially deleted in new
chr7	90590618	90595748	chr7:90590618-90595748	1	-	90590618	90590618	8553170	3	110,186,21,	0,1097,5109,
#Partially deleted in new
chr7	90590622	90597353	chr7:90590622-90597353	3	-	90590622	90590622	8553170	3	106,186,157,	0,1093,6574,
#Partially deleted in new
chr7	90590622	90595890	chr7:90590622-90595890	1	-	90590622	90590622	8553170	3	106,186,158,	0,1093,5110,
#Partially deleted in new
chr7	90596496	91210590	chr7:90596496-91210590	3	+	90596627	91118180	789624	15	222,32,246,95,80,95,63,124,121,94,64,49,140,144,3426,	0,7721,130070,151184,194076,266678,302794,321104,359200,387651,449400,482935,516045,521568,610668,
#Deleted in new
chr7	90631905	90632568	chr7:90631905-90632568	7	+	90631905	90631905	16724991	2	69,570,	0,93,
#Partially deleted in new
chr7	90709250	90726644	chr7:90709250-90726644	0	+	90709250	90709250	8553170	3	360,142,78,	0,565,17316,
#Partially deleted in new
chr7	90709265	90747725	chr7:90709265-90747725	0	+	90726581	90747725	789624	4	130,142,246,45,	0,550,17301,38415,
#Partially deleted in new
chr7	90709397	91210589	chr7:90709397-91210589	1	+	90709541	91118180	789624	14	213,246,95,80,95,63,124,121,94,64,49,140,144,3425,	0,17169,38283,81175,153777,189893,208203,246299,274750,336499,370034,403144,408667,497767,
#Partially deleted in new
chr7	90709530	91210585	chr7:90709530-91210585	1	+	90726581	91118180	789624	14	427,246,95,80,95,63,124,121,94,64,49,140,144,3421,	0,17036,38150,81042,153644,189760,208070,246166,274617,336366,369901,403011,408534,497634,
#Partially deleted in new
chr7	90709815	91210589	chr7:90709815-91210589	1	+	90726735	91118180	789624	13	142,246,80,95,63,124,121,94,64,49,140,144,3425,	0,16751,80757,153359,189475,207785,245881,274332,336081,369616,402726,408249,497349,
#Partially deleted in new
chr7	90709861	90955793	chr7:90709861-90955793	0	+	90726581	90863205	789624	7	96,246,80,95,63,124,97,	0,16705,80711,153313,189429,207739,245835,
#Partially deleted in new
chr7	90726503	90790614	chr7:90726503-90790614	0	+	90726503	90726503	8553170	3	309,95,42,	0,21177,64069,
#Partially deleted in new
chr7	90824604	90955796	chr7:90824604-90955796	0	+	90824604	90824604	8553170	5	163,95,63,124,100,	0,38570,74686,92996,131092,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	90955791	90979801	chr7:90955791-90979801	0	+	90955791	90955791	8553170	2	26,410,	0,23600,
#Deleted in new
chr7	91107373	91107793	chr7:91107373-91107793	7	+	91107373	91107373	16724991	1	420,	0,
#Deleted in new
chr7	91264363	91271326	chr7:91264363-91271326	3	+	91264880	91266824	789624	1	6963,	0,
#Partially deleted in new
chr7	91311367	91335741	chr7:91311367-91335741	1	+	91311367	91311367	8553170	6	19,123,58,186,108,187,	0,1072,4605,9434,22486,24187,
#Partially deleted in new
chr7	91312439	91335722	chr7:91312439-91335722	0	+	91312439	91312439	8553170	5	123,58,108,173,168,	0,3533,21414,22757,23115,
#Deleted in new
chr7	91320127	91321103	chr7:91320127-91321103	7	-	91320127	91320127	16724991	1	976,	0,
#Partially deleted in new
chr7	91380777	91556848	chr7:91380777-91556848	3	-	91380777	91380777	8553170	2	90,112,	0,175959,
#Partially deleted in new
chr7	91638846	91643512	chr7:91638846-91643512	3	-	91638846	91638846	8553170	2	397,139,	0,4527,
#Partially deleted in new
chr7	91692007	91880690	chr7:91692007-91880690	0	-	91692007	91692007	8553170	5	159,62,66,59,34,	0,1390,135407,188047,188649,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	91870928	91880702	chr7:91870928-91880702	1	-	91873593	91874733	789624	2	3836,46,	0,9728,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	91872890	91880720	chr7:91872890-91880720	3	-	91873593	91880083	0	3	1874,59,64,	0,7164,7766,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	91873321	91880692	chr7:91873321-91880692	1	-	91873593	91874733	789624	4	1443,101,59,36,	0,3556,6733,7335,
#Partially deleted in new
chr7	91874314	91880679	chr7:91874314-91880679	0	-	91874314	91874733	789624	4	450,49,59,23,	0,2563,5740,6342,
#Partially deleted in new
chr7	91874317	91880690	chr7:91874317-91880690	0	-	91874317	91880083	789624	3	447,59,48,	0,5737,6325,
#Partially deleted in new
chr7	91874653	91880663	chr7:91874653-91880663	0	-	91874653	91874733	789624	2	111,609,	0,5401,
#Partially deleted in new
chr7	91876894	91880439	chr7:91876894-91880439	0	-	91876894	91876894	8553170	2	84,385,	0,3160,
#Partially deleted in new
chr7	91940866	92110673	chr7:91940866-92110673	3	+	91941099	92110159	789624	50	281,258,45,54,171,156,198,2388,214,80,139,86,115,196,97,93,354,225,141,104,206,233,163,213,233,120,177,105,153,180,1074,141,486,64,122,192,189,145,220,151,669,209,106,183,201,233,86,130,140,552,	0,32844,39422,51291,52018,53754,54736,59981,71562,73382,75262,76150,81371,81947,89028,90645,97552,99807,101179,101801,104141,111859,120393,121407,124364,125560,129163,130038,135988,136829,138212,141655,142303,143773,143952,144628,145361,148518,152230,154156,155822,156719,157242,158820,159989,161727,164811,166426,167627,169255,
#Partially deleted in new
chr7	91940915	92041781	chr7:91940915-92041781	0	+	91940915	91940915	8553170	19	232,36,258,45,54,171,156,198,2388,214,80,139,86,115,196,97,93,354,1108,	0,29557,32795,39373,51242,51969,53705,54687,59932,71513,73333,75213,76101,81322,81898,88979,90596,97503,99758,
#Partially deleted in new
chr7	91940915	92041781	chr7:91940915-92041781	1	+	91941099	92040873	789624	20	242,14,258,45,54,171,156,198,2388,214,80,139,86,115,196,97,93,354,183,923,	0,32776,32795,39373,51242,51969,53705,54687,59932,71513,73333,75213,76101,81322,81898,88979,90596,97503,99758,99943,
#Partially deleted in new
chr7	91940925	91996052	chr7:91940925-91996052	1	+	91941099	91995815	789624	7	222,258,45,54,171,156,450,	0,32785,39363,51232,51959,53695,54677,
#Boundary problem: need 37, got 0, diff 37, mapped 0.0
chr7	91941099	92090621	chr7:91941099-92090621	1	+	91941099	92089693	789624	37	48,258,45,54,171,156,198,2388,214,80,139,86,115,196,97,93,354,225,104,206,233,163,213,233,120,177,105,153,180,1074,141,486,64,122,192,189,1237,	0,32611,39189,51058,51785,53521,54503,59748,71329,73149,75029,75917,81138,81714,88795,90412,97319,99574,101568,103908,111626,120160,121174,124131,125327,128930,129805,135755,136596,137979,141422,142070,143540,143719,144395,145128,148285,
#Partially deleted in new
chr7	91941099	92110673	chr7:91941099-92110673	1	+	91941099	92110159	789624	50	63,18,258,45,54,171,156,198,2388,214,80,139,86,115,196,97,93,354,225,141,104,206,233,163,213,233,120,177,105,153,180,1074,141,526,122,192,189,145,220,151,669,209,106,183,201,233,86,130,140,552,	0,32590,32611,39189,51058,51785,53521,54503,59748,71329,73149,75029,75917,81138,81714,88795,90412,97319,99574,100946,101568,103908,111626,120160,121174,124131,125327,128930,129805,135755,136596,137979,141422,142070,143719,144395,145128,148285,151997,153923,155589,156486,157009,158587,159756,161494,164578,166193,167394,169022,
#Partially deleted in new
chr7	91973755	91995713	chr7:91973755-91995713	0	+	91973755	91995713	789624	5	213,45,171,156,111,	0,6533,19129,20865,21847,
#Deleted in new
chr7	92040703	92043143	chr7:92040703-92043143	0	+	92040703	92040703	8553170	2	195,476,	0,1964,
#Partially deleted in new
chr7	92057625	92065454	chr7:92057625-92065454	0	+	92058168	92065454	789624	4	789,163,213,224,	0,3634,4648,7605,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr7	92070137	92109061	chr7:92070137-92109061	0	+	92070137	92108719	789624	23	45,105,153,180,1074,141,486,64,122,192,189,145,220,151,669,209,106,183,201,233,86,130,568,	0,767,6717,7558,8941,12384,13032,14502,14681,15357,16090,19247,22959,24885,26551,27448,27971,29549,30718,32456,35540,37155,38356,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	92083575	92090641	chr7:92083575-92090641	0	+	92083575	92089693	789624	6	80,64,122,192,189,1257,	0,1064,1243,1919,2652,5809,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	92091988	92110668	chr7:92091988-92110668	0	+	92091988	92091988	8553170	12	1328,151,669,209,106,183,201,233,86,130,140,547,	0,3034,4700,5597,6120,7698,8867,10605,13689,15304,16505,18133,
#Deleted in new
chr7	92097159	92100042	chr7:92097159-92100042	0	+	92097159	92097159	8553170	4	198,209,106,356,	0,426,949,2527,
#Partially deleted in new
chr7	92098153	92107512	chr7:92098153-92107512	0	+	92098153	92098153	8553170	6	61,183,201,140,86,220,	0,1533,2702,4533,7524,9139,
#Partially deleted in new
chr7	92102588	92110467	chr7:92102588-92110467	0	+	92102588	92102588	8553170	2	238,346,	0,7533,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	92105676	92107929	chr7:92105676-92107929	0	+	92105676	92105676	8553170	2	87,637,	0,1616,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	92112150	92134530	chr7:92112150-92134530	3	-	92113664	92134364	789624	10	1693,169,96,196,120,175,127,177,99,358,	0,4893,6369,10969,11583,14102,15354,16729,19623,22022,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	92112158	92179511	chr7:92112158-92179511	0	-	92112158	92112158	8553170	11	1685,169,96,196,120,175,127,177,99,162,505,	0,4885,6361,10961,11575,14094,15346,16721,19615,38375,66848,
#Partially deleted in new
chr7	92113411	92134803	chr7:92113411-92134803	1	-	92113664	92129032	789624	10	432,169,96,196,120,175,127,177,99,138,	0,3632,5108,9708,10322,12841,14093,15468,18362,21254,
#Partially deleted in new
chr7	92113584	92123844	chr7:92113584-92123844	0	-	92113664	92123844	789624	6	259,49,36,96,196,111,	0,3459,3592,4935,9535,10149,
#Partially deleted in new
chr7	92113693	92117448	chr7:92113693-92117448	0	-	92113693	92113693	8553170	2	150,405,	0,3350,
#Partially deleted in new
chr7	92131773	92245924	chr7:92131773-92245924	3	-	92131773	92242135	8553170	18	99,207,88,167,152,157,108,157,144,116,244,130,93,160,104,148,233,135,	0,81421,82118,82837,90128,91048,93946,94752,102675,103034,103629,104639,105893,109219,110260,112228,113128,114016,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	92131806	92142952	chr7:92131806-92142952	3	-	92131806	92142486	789624	2	66,490,	0,10656,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	92134603	92180725	chr7:92134603-92180725	3	+	92134603	92134603	789624	5	479,185,333,85,1875,	0,4163,7798,30376,44247,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	92141642	92179531	chr7:92141642-92179531	1	-	92142809	92159173	789624	4	1187,162,199,525,	0,8891,17362,37364,
#Partially deleted in new
chr7	92144841	92179133	chr7:92144841-92179133	3	-	92144887	92165202	789624	6	233,118,162,199,1991,127,	0,1241,5692,14163,18444,34165,
#Partially deleted in new
chr7	92144883	92165276	chr7:92144883-92165276	1	-	92144887	92165202	789624	5	191,118,162,199,1991,	0,1199,5650,14121,18402,
#Partially deleted in new
chr7	92165025	92179127	chr7:92165025-92179127	0	-	92165025	92165202	789624	2	251,156,	0,13946,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr7	92198968	92246100	chr7:92198968-92246100	3	-	92200735	92242135	0	20	1836,117,207,88,167,152,157,108,157,144,116,244,130,93,160,104,148,270,169,195,	0,2338,14226,14923,15642,22933,23853,26751,27557,35480,35839,36434,37444,38698,42024,43065,45033,45933,46458,46937,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr7	92199412	92246100	chr7:92199412-92246100	1	-	92200735	92242135	0	19	1392,117,207,88,167,152,157,108,157,144,116,244,130,93,160,104,148,233,636,	0,1894,13782,14479,15198,22489,23409,26307,27113,35036,35395,35990,37000,38254,41580,42621,44589,45489,46052,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	92199412	92241119	chr7:92199412-92241119	0	-	92199412	92199412	8553170	13	1392,117,207,88,167,152,157,157,144,116,1140,93,127,	0,1894,13782,14479,15198,22489,23409,27113,35036,35395,35990,38254,41580,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	92200013	92206857	chr7:92200013-92206857	3	-	92200013	92200013	8553170	2	429,1160,	0,5684,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	92200177	92235773	chr7:92200177-92235773	0	-	92200177	92200177	8553170	12	627,117,207,88,167,152,157,108,157,144,116,371,	0,1129,13017,13714,14433,21724,22644,25542,26348,34271,34630,35225,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr7	92200357	92245923	chr7:92200357-92245923	1	-	92200735	92242135	0	19	447,117,207,88,167,152,157,108,157,144,116,244,130,93,160,104,148,270,134,	0,949,12837,13534,14253,21544,22464,25362,26168,34091,34450,35045,36055,37309,40635,41676,43644,44544,45432,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr7	92200357	92245795	chr7:92200357-92245795	1	-	92200735	92242135	0	19	447,117,207,88,167,152,157,108,157,144,116,244,130,93,160,104,148,270,369,	0,949,12837,13534,14253,21544,22464,25362,26168,34091,34450,35045,36055,37309,40635,41676,43644,44544,45069,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr7	92200372	92245914	chr7:92200372-92245914	1	-	92200735	92242135	0	17	432,117,207,88,167,152,157,108,157,116,244,130,93,160,104,270,125,	0,934,12822,13519,14238,21529,22449,25347,26153,34435,35030,36040,37294,40620,41661,44529,45417,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	92200453	92201555	chr7:92200453-92201555	0	-	92200453	92200453	8553170	2	351,249,	0,853,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	92202242	92202334	chr7:92202242-92202334	3	-	92202242	92202242	8553170	1	92,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	92204014	92204098	chr7:92204014-92204098	3	-	92204014	92204014	5263520	1	84,	0,
#Partially deleted in new
chr7	92225765	92235615	chr7:92225765-92235615	0	-	92225765	92235548	789624	5	62,157,144,116,82,	0,760,8683,9042,9768,
#Partially deleted in new
chr7	92235402	92246059	chr7:92235402-92246059	0	-	92235402	92242135	789624	9	244,130,93,160,104,148,270,169,154,	0,1010,2264,5590,6631,8599,9499,10024,10503,
#Partially deleted in new
chr7	92235578	92245920	chr7:92235578-92245920	0	-	92235578	92242135	789624	7	68,130,93,160,104,169,131,	0,834,2088,5414,6455,9848,10211,
#Partially deleted in new
chr7	92236410	92245914	chr7:92236410-92245914	0	-	92236410	92242135	789624	7	132,93,160,104,148,270,71,	0,1256,4582,5623,7591,8491,9433,
#Partially deleted in new
chr7	92237685	92245914	chr7:92237685-92245914	0	-	92237685	92242135	789624	5	74,160,104,148,71,	0,3307,4348,7741,8158,
#Partially deleted in new
chr7	92237728	92245871	chr7:92237728-92245871	0	-	92237728	92242135	789624	4	31,160,104,407,	0,3264,4305,7736,
#Partially deleted in new
chr7	92240848	92244149	chr7:92240848-92244149	0	-	92240848	92240848	8553170	3	304,128,148,	0,1185,3153,
#Partially deleted in new
chr7	92241046	92245914	chr7:92241046-92245914	0	-	92241046	92242135	789624	4	106,104,270,71,	0,987,3855,4797,
#Partially deleted in new
chr7	92241057	92245943	chr7:92241057-92245943	0	-	92241057	92242135	789624	4	95,104,270,38,	0,976,3844,4848,
#Partially deleted in new
chr7	92241080	92245915	chr7:92241080-92245915	0	-	92241080	92242135	789624	3	72,104,489,	0,953,4346,
#Partially deleted in new
chr7	92241140	92245943	chr7:92241140-92245943	0	-	92241140	92242135	789624	5	12,104,148,270,38,	0,893,2861,3761,4765,
#Partially deleted in new
chr7	92242033	92246166	chr7:92242033-92246166	0	-	92242033	92242135	789624	4	104,148,270,261,	0,1968,2868,3872,
#Partially deleted in new
chr7	92242060	92245930	chr7:92242060-92245930	0	-	92242060	92242135	789624	4	77,148,233,25,	0,1941,2841,3845,
#Partially deleted in new
chr7	92242100	92245912	chr7:92242100-92245912	0	-	92242100	92242135	789624	4	37,148,270,91,	0,1901,2801,3721,
#Deleted in new
chr7	92244049	92245924	chr7:92244049-92245924	0	-	92244049	92244049	8553170	4	100,233,131,81,	0,852,1415,1794,
#Deleted in new
chr7	92245109	92245914	chr7:92245109-92245914	0	-	92245109	92245109	8553170	2	62,450,	0,355,
#Partially deleted in new
chr7	92246233	92401384	chr7:92246233-92401384	3	+	92294978	92398949	789624	20	286,278,298,183,118,209,89,145,167,89,131,135,87,67,146,179,52,112,137,3173,	0,48655,61125,73096,81549,96790,98744,104716,106242,115951,125243,140275,141564,141741,143737,144932,146007,150131,151489,151978,
#Partially deleted in new
chr7	92294461	92307572	chr7:92294461-92307572	0	+	92294978	92307572	789624	3	55,278,214,	0,427,12897,
#Partially deleted in new
chr7	92307358	92343117	chr7:92307358-92343117	0	+	92307358	92325933	789624	5	298,183,81,118,94,	0,11971,18569,20424,35665,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	92319421	92319966	chr7:92319421-92319966	0	+	92319421	92319421	8553170	2	91,347,	0,198,
#Partially deleted in new
chr7	92343137	92362260	chr7:92343137-92362260	0	+	92343137	92348016	789624	6	95,89,70,145,167,76,	0,1840,4809,7812,9338,19047,
#Partially deleted in new
chr7	92371571	92399348	chr7:92371571-92399348	0	+	92371571	92386635	789624	9	36,135,87,67,146,179,112,137,1137,	0,14937,16226,16403,18399,19594,24793,26151,26640,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	92395868	92397837	chr7:92395868-92397837	0	+	92395868	92395868	8553170	2	608,115,	0,1854,
#Partially deleted in new
chr7	92412549	92437314	chr7:92412549-92437314	5	-	92412549	92412549	16724991	10	573,48,90,88,38,91,54,79,275,382,	0,2935,5794,9646,9819,13866,15463,16820,20605,24383,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	92412607	92447813	chr7:92412607-92447813	7	-	92412607	92412607	16724991	10	515,48,90,88,195,91,54,275,99,61,	0,2877,5736,9588,9761,13808,15405,20547,23089,35145,
#Partially deleted in new
chr7	92412978	92433431	chr7:92412978-92433431	5	-	92412978	92412978	16724991	8	144,48,90,88,38,91,79,277,	0,2506,5365,9217,9390,13437,16391,20176,
#Deleted in new
chr7	92442076	92442489	chr7:92442076-92442489	7	+	92442076	92442076	16724991	1	413,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	92447447	92459432	chr7:92447447-92459432	3	+	92447729	92456562	789624	5	531,126,60,184,3061,	0,1304,3253,7054,8924,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	92447502	92457119	chr7:92447502-92457119	0	+	92447729	92450734	789624	6	476,126,122,60,184,748,	0,1249,1589,3198,6999,8869,
#Deleted in new
chr7	92447873	92449094	chr7:92447873-92449094	0	+	92447873	92447873	8553170	2	105,343,	0,878,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	92449717	92457161	chr7:92449717-92457161	0	+	92449717	92449717	8553170	3	1043,184,790,	0,4784,6654,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	92454054	92456537	chr7:92454054-92456537	0	+	92454054	92454054	8553170	2	631,166,	0,2317,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	92457563	92491610	chr7:92457563-92491610	3	+	92457563	92457563	8553170	5	26,92,69,88,368,	0,3755,5394,7538,33679,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	92468379	92477915	chr7:92468379-92477915	3	-	92468764	92470381	0	2	2229,534,	0,9002,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	92468379	92477946	chr7:92468379-92477946	0	-	92468379	92468379	8553170	2	566,565,	0,9002,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	92468379	92473189	chr7:92468379-92473189	0	-	92468379	92468379	8553170	2	566,2786,	0,2024,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	92468380	92471305	chr7:92468380-92471305	1	-	92468764	92470381	0	1	2925,	0,
#Partially deleted in new
chr7	92487019	92528531	chr7:92487019-92528531	3	-	92487456	92528435	789624	24	522,131,198,231,177,104,143,65,135,167,190,155,171,97,133,83,104,124,120,767,115,84,144,225,	0,2273,2694,4252,5933,7273,7467,9693,12684,14487,14870,16021,17712,19228,19974,22309,23924,24560,26828,30256,31121,31975,35082,41287,
#Partially deleted in new
chr7	92487019	92528441	chr7:92487019-92528441	1	-	92487456	92528435	789624	21	522,131,198,231,177,104,143,65,135,167,190,155,171,97,133,83,104,124,120,144,135,	0,2273,2694,4252,5933,7273,7467,9693,12684,14487,14870,16021,17712,19228,19974,22309,23924,24560,26828,35082,41287,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	92487025	92507823	chr7:92487025-92507823	0	-	92487025	92487025	8553170	12	516,131,193,231,1444,143,65,135,573,155,171,1576,	0,2267,2693,4246,5927,7461,9687,12678,14481,16015,17706,19222,
#Partially deleted in new
chr7	92487289	92489794	chr7:92487289-92489794	0	-	92487289	92487289	8553170	2	252,502,	0,2003,
#Partially deleted in new
chr7	92487296	92528439	chr7:92487296-92528439	0	-	92487296	92487296	8553170	24	245,131,198,231,177,104,143,65,135,167,190,155,171,97,133,83,104,124,120,767,115,119,144,133,	0,1996,2417,3975,5656,6996,7190,9416,12407,14210,14593,15744,17435,18951,19697,22032,23647,24283,26551,29979,30844,31663,34805,41010,
#Partially deleted in new
chr7	92487456	92528435	chr7:92487456-92528435	1	-	92487456	92528435	789624	23	85,131,198,231,177,104,143,65,135,167,190,155,97,133,83,104,124,120,767,115,84,144,129,	0,1836,2257,3815,5496,6836,7030,9256,12247,14050,14433,15584,18791,19537,21872,23487,24123,26391,29819,30684,31538,34645,40850,
#Deleted in new
chr7	92489371	92490246	chr7:92489371-92490246	0	-	92489371	92489371	8553170	2	52,533,	0,342,
#Partially deleted in new
chr7	92490084	92491579	chr7:92490084-92491579	0	+	92490084	92490084	8553170	2	58,337,	0,1158,
#Partially deleted in new
chr7	92501767	92503064	chr7:92501767-92503064	0	-	92501767	92501767	8553170	2	312,24,	0,1273,
#Partially deleted in new
chr7	92504886	92517415	chr7:92504886-92517415	0	-	92507024	92517415	789624	7	16,97,133,104,124,120,140,	0,1361,2107,6057,6693,8961,12389,
#Partially deleted in new
chr7	92510864	92513967	chr7:92510864-92513967	0	-	92510864	92510864	8553170	3	183,124,120,	0,715,2983,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	92528772	92537534	chr7:92528772-92537534	3	+	92528813	92536937	789624	5	152,191,146,569,684,	0,703,3631,5629,8078,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	92528772	92538005	chr7:92528772-92538005	1	+	92528813	92535084	789624	4	152,191,146,3604,	0,703,3631,5629,
#Partially deleted in new
chr7	92528806	92532550	chr7:92528806-92532550	0	+	92529538	92532550	789624	3	377,191,147,	0,669,3597,
#Partially deleted in new
chr7	92540267	92557877	chr7:92540267-92557877	7	-	92540267	92540267	16724991	5	103,151,105,156,58,	0,8444,10448,12386,17552,
#Partially deleted in new
chr7	92560792	92590393	chr7:92560792-92590393	1	-	92562281	92581597	789624	12	1576,48,93,51,93,63,33,75,79,98,99,126,	0,5221,9030,14978,16310,16862,17357,17526,18524,20713,24505,29475,
#Partially deleted in new
chr7	92561102	92590394	chr7:92561102-92590394	3	-	92562281	92590291	789624	11	1266,48,93,51,93,63,33,75,79,98,127,	0,4911,8720,14668,16000,16552,17047,17216,18214,20403,29165,
#Partially deleted in new
chr7	92561136	92590329	chr7:92561136-92590329	0	-	92577667	92590291	789624	11	1232,52,93,51,93,22,33,75,79,98,62,	0,4873,8686,14634,15966,16518,17013,17182,18180,20369,29131,
#Partially deleted in new
chr7	92561215	92590390	chr7:92561215-92590390	0	-	92561215	92561215	8553170	9	1153,93,51,93,528,75,79,98,123,	0,8607,14555,15887,16439,17103,18101,20290,29052,
#Partially deleted in new
chr7	92562281	92590070	chr7:92562281-92590070	1	-	92562281	92581597	789624	11	87,48,93,51,93,63,33,75,79,98,211,	0,3732,7541,13489,14821,15373,15868,16037,17035,19224,27578,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	92565507	92577717	chr7:92565507-92577717	0	-	92565998	92577717	789624	5	554,93,51,93,63,	0,4315,10263,11595,12147,
#Partially deleted in new
chr7	92566049	92575854	chr7:92566049-92575854	0	-	92566049	92566049	8553170	3	12,93,84,	0,3773,9721,
#Partially deleted in new
chr7	92569541	92577394	chr7:92569541-92577394	0	-	92569541	92569541	8553170	3	374,51,292,	0,6229,7561,
#Partially deleted in new
chr7	92578318	92581806	chr7:92578318-92581806	0	-	92578318	92578318	8553170	3	75,79,301,	0,998,3187,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	92579154	92590338	chr7:92579154-92590338	0	-	92579154	92579154	8553170	3	241,98,71,	0,2351,11113,
#Partially deleted in new
chr7	92581505	92590030	chr7:92581505-92590030	0	-	92581505	92581597	789624	2	98,155,	0,8370,
#Partially deleted in new
chr7	92604920	92833917	chr7:92604920-92833917	3	-	92615139	92833323	0	8	10366,136,51,110,168,136,600,45,	0,13151,18115,66505,120705,169775,228170,228952,
#Deleted in new
chr7	92614713	92618277	chr7:92614713-92618277	0	-	92614713	92614713	8553170	2	573,206,	0,3358,
#Partially deleted in new
chr7	92615139	92836594	chr7:92615139-92836594	1	-	92615139	92833323	0	8	147,136,51,110,168,136,600,117,	0,2932,7896,56286,110486,159556,217951,221338,
#Partially deleted in new
chr7	92671234	92725710	chr7:92671234-92725710	0	-	92671234	92671234	8553170	2	301,85,	0,54391,
#Deleted in new
chr7	92833402	92835297	chr7:92833402-92835297	0	-	92833402	92833402	8553170	2	288,270,	0,1625,
#Partially deleted in new
chr7	92836482	92917187	chr7:92836482-92917187	0	+	92836482	92836482	789624	2	81,351,	0,80354,
#Partially deleted in new
chr7	92836488	92917123	chr7:92836488-92917123	0	+	92836488	92836488	789624	3	75,45,287,	0,18420,80348,
#Partially deleted in new
chr7	92854908	92917174	chr7:92854908-92917174	3	+	92854908	92854908	8553170	3	45,144,338,	0,775,61928,
#Partially deleted in new
chr7	92854908	92917151	chr7:92854908-92917151	0	+	92854908	92854908	8553170	2	91,315,	0,61928,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	92971001	92971299	chr7:92971001-92971299	3	-	92971001	92971001	8553170	1	298,	0,
#Partially deleted in new
chr7	93099512	93118023	chr7:93099512-93118023	3	-	93101327	93106097	789624	2	6593,161,	0,18350,
#Partially deleted in new
chr7	93099515	93118023	chr7:93099515-93118023	1	-	93101327	93106097	789624	3	6590,101,161,	0,15279,18347,
#Partially deleted in new
chr7	93102248	93117962	chr7:93102248-93117962	0	-	93102248	93106097	789624	2	3857,100,	0,15614,
#Partially deleted in new
chr7	93130054	93148368	chr7:93130054-93148368	3	-	93131216	93135971	789624	5	5937,102,656,264,175,	0,14677,15330,16828,18139,
#Partially deleted in new
chr7	93130762	93148354	chr7:93130762-93148354	1	-	93131216	93135971	789624	6	5229,102,148,132,59,161,	0,13969,14622,15146,16325,17431,
#Partially deleted in new
chr7	93131032	93148345	chr7:93131032-93148345	1	-	93131216	93135971	789624	6	4959,102,148,132,264,152,	0,13699,14352,14876,15850,17161,
#Partially deleted in new
chr7	93131216	93135971	chr7:93131216-93135971	1	-	93131216	93135971	789624	2	769,452,	0,4303,
#Partially deleted in new
chr7	93135762	93148345	chr7:93135762-93148345	0	-	93135762	93135971	789624	2	229,152,	0,12431,
#Partially deleted in new
chr7	93135762	93148345	chr7:93135762-93148345	0	-	93135762	93135971	789624	4	229,102,148,152,	0,8969,9622,12431,
#Partially deleted in new
chr7	93135762	93148345	chr7:93135762-93148345	0	-	93135762	93135971	789624	5	229,102,656,59,152,	0,8969,9622,11325,12431,
#Partially deleted in new
chr7	93135762	93148345	chr7:93135762-93148345	0	-	93135762	93135971	789624	5	229,102,148,132,152,	0,8969,9622,10146,12431,
#Partially deleted in new
chr7	93145605	93148369	chr7:93145605-93148369	0	-	93145605	93145605	8553170	2	435,176,	0,2588,
#Partially deleted in new
chr7	93188585	93219582	chr7:93188585-93219582	1	-	93189266	93219494	789624	9	685,110,74,38,25,126,297,285,482,	0,3668,7242,8655,8787,8899,19994,26815,30515,
#Partially deleted in new
chr7	93188585	93226524	chr7:93188585-93226524	3	-	93189266	93226446	789624	10	685,110,74,38,25,126,297,285,351,157,	0,3668,7242,8655,8787,8899,19994,26815,30515,37782,
#Partially deleted in new
chr7	93188585	93219545	chr7:93188585-93219545	1	-	93189226	93219494	789624	8	685,110,74,38,126,297,285,445,	0,3668,7242,8655,8899,19994,26815,30515,
#Partially deleted in new
chr7	93188878	93226469	chr7:93188878-93226469	1	-	93189266	93226446	789624	11	392,110,74,38,25,126,297,285,351,69,102,	0,3375,6949,8362,8494,8606,19701,26522,30222,37004,37489,
#Partially deleted in new
chr7	93188966	93205647	chr7:93188966-93205647	0	-	93188966	93188966	8553170	6	304,110,74,38,126,135,	0,3287,6861,8274,8518,16546,
#Partially deleted in new
chr7	93232339	93276428	chr7:93232339-93276428	1	+	93232467	93276347	789624	12	161,69,123,72,54,71,118,36,83,43,99,264,	0,7526,20313,21520,24169,25054,25819,26017,27210,38880,40295,43825,
#Partially deleted in new
chr7	93232339	93359026	chr7:93232339-93359026	3	+	93232467	93358436	789624	28	161,69,123,72,54,71,118,36,83,43,99,141,133,92,95,99,91,177,119,107,122,81,149,97,159,122,190,710,	0,7526,20313,21520,24169,25054,25819,26017,27210,38880,40295,43825,59363,62205,64402,64805,71120,73488,76484,78826,91271,101777,109087,116371,117535,121300,123551,125977,
#Partially deleted in new
chr7	93232339	93361121	chr7:93232339-93361121	1	+	93246117	93358436	789624	29	161,69,28,123,72,54,71,118,36,83,43,99,141,133,92,95,99,91,177,119,107,122,81,149,97,159,122,190,2805,	0,7526,13762,20313,21520,24169,25054,25819,26017,27210,38880,40295,43825,59363,62205,64402,64805,71120,73488,76484,78826,91271,101777,109087,116371,117535,121300,123551,125977,
#Partially deleted in new
chr7	93232365	93257450	chr7:93232365-93257450	0	+	93232467	93246113	789624	7	135,69,28,123,72,54,57,	0,7500,13736,20287,21494,24143,25028,
#Partially deleted in new
chr7	93232365	93359024	chr7:93232365-93359024	0	+	93232467	93253861	789624	27	135,85,72,54,71,118,36,83,43,99,141,133,92,95,99,91,177,119,107,122,81,149,97,155,122,190,708,	0,7500,21494,24143,25028,25793,25991,27184,38854,40269,43799,59337,62179,64376,64779,71094,73462,76458,78800,91245,101751,109061,116345,117513,121274,123525,125951,
#Partially deleted in new
chr7	93232368	93258387	chr7:93232368-93258387	0	+	93232467	93258387	789624	8	132,69,123,69,54,71,118,31,	0,7497,20284,21494,24140,25025,25790,25988,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr7	93232371	93360898	chr7:93232371-93360898	0	+	93232467	93240793	8553170	29	129,69,103,123,72,54,71,118,36,83,43,99,141,133,92,95,99,91,177,119,107,122,81,149,97,159,122,190,2582,	0,7494,8344,20281,21488,24137,25022,25787,25985,27178,38848,40263,43793,59331,62173,64370,64773,71088,73456,76452,78794,91239,101745,109055,116339,117503,121268,123519,125945,
#Partially deleted in new
chr7	93232374	93257522	chr7:93232374-93257522	0	+	93232374	93232374	8553170	6	126,69,123,72,54,129,	0,7491,20278,21485,24134,25019,
#Partially deleted in new
chr7	93232375	93258231	chr7:93232375-93258231	0	+	93232467	93252654	789624	7	125,85,123,72,54,71,73,	0,7490,20277,21484,24133,25018,25783,
#Partially deleted in new
chr7	93232427	93257765	chr7:93232427-93257765	0	+	93232427	93232427	8553170	6	73,69,123,69,54,372,	0,7438,20225,21435,24081,24966,
#Deleted in new
chr7	93256429	93259572	chr7:93256429-93259572	0	+	93256429	93256429	8553170	5	133,71,118,36,23,	0,964,1729,1927,3120,
#Partially deleted in new
chr7	93258108	93359021	chr7:93258108-93359021	0	+	93258108	93258108	8553170	20	284,83,43,99,141,133,92,95,99,91,177,119,107,273,149,97,155,122,190,705,	0,1441,13111,14526,18056,33594,36436,38633,39036,45351,47719,50715,53057,82489,83318,90602,91770,95531,97782,100208,
#Partially deleted in new
chr7	93259414	93273488	chr7:93259414-93273488	0	+	93259414	93259414	8553170	3	218,43,854,	0,11805,13220,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	93259613	93321058	chr7:93259613-93321058	0	+	93259613	93320569	789624	13	19,43,99,141,133,92,95,99,91,177,119,107,683,	0,11606,13021,16551,32089,34931,37128,37531,43846,46214,49210,51552,60762,
#Partially deleted in new
chr7	93271065	93294568	chr7:93271065-93294568	0	+	93271065	93271065	8553170	5	197,99,141,133,24,	0,1569,5099,20637,23479,
#Partially deleted in new
chr7	93275841	93291796	chr7:93275841-93291796	0	+	93275841	93275841	8553170	2	464,94,	0,15861,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	93295414	93305906	chr7:93295414-93305906	0	+	93295414	93295414	8553170	5	17,218,99,91,79,	0,1327,1730,8045,10413,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	93320852	93341479	chr7:93320852-93341479	0	+	93320852	93320852	8553170	4	318,122,81,53,	0,2758,13264,20574,
#Partially deleted in new
chr7	93323249	93348798	chr7:93323249-93348798	0	+	93323249	93323249	8553170	4	483,81,149,88,	0,10867,18177,25461,
#Partially deleted in new
chr7	93333898	93356078	chr7:93333898-93356078	0	+	93333898	93333898	8553170	7	27,81,149,97,155,122,188,	0,218,7528,14812,15980,19741,21992,
#Partially deleted in new
chr7	93349897	93356186	chr7:93349897-93356186	0	+	93349897	93356098	789624	3	136,122,296,	0,3742,5993,
#Partially deleted in new
chr7	93424486	93574730	chr7:93424486-93574730	1	-	93426355	93495931	789624	16	2103,42,219,67,61,154,127,48,92,113,111,154,77,71,218,39,	0,9766,11465,13573,13723,19117,36334,37576,44228,47888,53071,54867,62444,71417,149802,150205,
#Partially deleted in new
chr7	93424491	93574438	chr7:93424491-93574438	1	-	93426355	93486981	789624	15	2098,42,219,67,61,154,127,48,92,113,111,154,77,71,150,	0,9761,11460,13568,13718,19112,36329,37571,44223,47883,53066,54862,62439,71412,149797,
#Partially deleted in new
chr7	93424538	93574730	chr7:93424538-93574730	3	-	93426355	93486981	789624	14	2051,42,219,67,61,154,127,92,113,111,154,77,218,39,	0,9714,11413,13521,13671,19065,36282,44176,47836,53019,54815,62392,149750,150153,
#Partially deleted in new
chr7	93424538	93574730	chr7:93424538-93574730	1	-	93426355	93486981	8553170	15	2051,42,219,67,61,154,127,48,92,113,111,154,77,71,442,	0,9714,11413,13521,13671,19065,36282,37524,44176,47836,53019,54815,62392,71365,149750,
#Partially deleted in new
chr7	93426309	93487013	chr7:93426309-93487013	1	-	93468745	93486981	789624	13	280,42,219,67,61,154,127,49,42,113,111,154,83,	0,7943,9642,11750,11900,17294,34511,42405,42455,46065,51248,53044,60621,
#Partially deleted in new
chr7	93426322	93559810	chr7:93426322-93559810	1	-	93426355	93486981	789624	13	267,42,219,67,61,154,127,92,113,111,154,77,290,	0,7930,9629,11737,11887,17281,34498,42392,46052,51235,53031,60608,133198,
#Partially deleted in new
chr7	93426355	93486981	chr7:93426355-93486981	0	-	93441526	93486981	789624	13	234,42,219,67,61,50,154,127,92,113,111,154,51,	0,7897,9596,11704,11854,15144,17248,34465,42359,46019,51202,52998,60575,
#Partially deleted in new
chr7	93426355	93486981	chr7:93426355-93486981	0	-	93441526	93486981	789624	14	234,42,219,67,61,50,154,127,48,92,113,111,154,51,	0,7897,9596,11704,11854,15144,17248,34465,35707,42359,46019,51202,52998,60575,
#Deleted in new
chr7	93482759	93482855	chr7:93482759-93482855	3	-	93482759	93482759	5263520	1	96,	0,
#Deleted in new
chr7	93483935	93484019	chr7:93483935-93484019	3	-	93483935	93483935	5263520	1	84,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	93591572	93911075	chr7:93591572-93911075	1	+	93906746	93909527	789624	4	199,44,107,1593,	0,294933,315163,317910,
#Deleted in new
chr7	93669825	93670077	chr7:93669825-93670077	7	-	93669825	93669825	16724991	1	252,	0,
#Deleted in new
chr7	93716927	93717005	chr7:93716927-93717005	3	+	93716927	93716927	5263520	1	78,	0,
#Deleted in new
chr7	93777838	93778514	chr7:93777838-93778514	7	+	93777838	93777838	16724991	1	676,	0,
#Deleted in new
chr7	93844788	93845308	chr7:93844788-93845308	7	+	93844788	93844788	16724991	1	520,	0,
#Partially deleted in new
chr7	93885395	93890991	chr7:93885395-93890991	3	-	93886819	93890678	0	5	1501,171,189,183,401,	0,1865,3639,4741,5195,
#Partially deleted in new
chr7	93885822	93890753	chr7:93885822-93890753	1	-	93886819	93890678	8553170	5	1074,171,189,183,163,	0,1438,3212,4314,4768,
#Partially deleted in new
chr7	93886433	93890170	chr7:93886433-93890170	0	-	93886890	93890170	789624	4	463,95,189,34,	0,827,2601,3703,
#Partially deleted in new
chr7	93886470	93890747	chr7:93886470-93890747	1	-	93886819	93890678	8553170	5	426,171,207,183,157,	0,790,2546,3666,4120,
#Partially deleted in new
chr7	93887374	93890753	chr7:93887374-93890753	0	-	93887374	93890678	8553170	4	57,189,150,163,	0,1660,2762,3216,
#Partially deleted in new
chr7	93887380	93890753	chr7:93887380-93890753	0	-	93887380	93890678	8553170	4	51,186,183,163,	0,1654,2756,3210,
#Deleted in new
chr7	93889917	93890753	chr7:93889917-93890753	0	-	93889917	93889917	8553170	2	402,163,	0,673,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	93890912	93893601	chr7:93890912-93893601	3	+	93890912	93890912	789624	2	167,360,	0,2329,
#Partially deleted in new
chr7	93906507	93911265	chr7:93906507-93911265	3	+	93906746	93910918	789624	3	137,107,476,	0,228,4282,
#Partially deleted in new
chr7	93906585	93911070	chr7:93906585-93911070	1	+	93906746	93910918	789624	2	257,281,	0,4204,
#Partially deleted in new
chr7	93906591	93909859	chr7:93906591-93909859	1	+	93906746	93909527	789624	2	251,377,	0,2891,
#Partially deleted in new
chr7	93906593	93910055	chr7:93906593-93910055	1	+	93906746	93909527	789624	3	51,107,573,	0,142,2889,
#Deleted in new
chr7	93914986	93915108	chr7:93914986-93915108	7	+	93914986	93914986	16724991	1	122,	0,
#Partially deleted in new
chr7	93921698	93928610	chr7:93921698-93928610	3	+	93922137	93926216	789624	2	535,2520,	0,4392,
#Deleted in new
chr7	93954043	93956519	chr7:93954043-93956519	3	-	93954043	93954043	8553170	1	2476,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	93962761	94004355	chr7:93962761-94004355	0	-	93975951	94004216	789624	7	2926,89,197,34,57,125,158,	0,9813,13142,31590,33503,36408,41436,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	93965409	93968390	chr7:93965409-93968390	0	-	93965409	93965409	8553170	2	278,36,	0,2945,
#Partially deleted in new
chr7	93969447	94011113	chr7:93969447-94011113	0	+	93969447	93969447	8553170	4	219,132,130,73,	0,17693,22589,41593,
#Partially deleted in new
chr7	93972382	93996321	chr7:93972382-93996321	0	-	93972382	93972382	8553170	3	281,197,57,	0,3521,23882,
#Partially deleted in new
chr7	93972494	94004329	chr7:93972494-94004329	0	-	93976043	94004216	8553170	5	169,197,57,125,132,	0,3409,23770,26675,31703,
#Partially deleted in new
chr7	93993241	94004375	chr7:93993241-94004375	3	-	93994229	94004216	0	4	1144,57,125,178,	0,3023,5928,10956,
#Partially deleted in new
chr7	93993259	94004361	chr7:93993259-94004361	1	-	93993893	94004216	0	5	651,34,57,125,164,	0,1092,3005,5910,10938,
#Partially deleted in new
chr7	93993272	93999719	chr7:93993272-93999719	0	-	93994229	93999719	789624	4	1113,57,125,62,	0,2992,5897,6385,
#Partially deleted in new
chr7	93996030	94004382	chr7:93996030-94004382	1	-	93996168	94004216	789624	3	291,125,185,	0,3139,8167,
#Partially deleted in new
chr7	94061140	94066661	chr7:94061140-94066661	1	+	94061140	94061140	8553170	5	130,170,96,52,295,	0,315,628,3285,5226,
#Partially deleted in new
chr7	94071758	94077157	chr7:94071758-94077157	3	-	94071758	94071758	8553170	3	200,83,163,	0,492,5236,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	94278679	94392196	chr7:94278679-94392196	1	-	94278679	94278679	8553170	9	307,62,91,71,79,89,119,129,79,	0,649,28879,88529,101627,106772,111948,112725,113438,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	94311137	94347063	chr7:94311137-94347063	3	+	94311137	94311137	8553170	4	111,73,92,404,	0,1274,32489,35522,
#Deleted in new
chr7	94391404	94395608	chr7:94391404-94395608	2	-	94391404	94391404	8553170	2	129,69,	0,4135,
#Partially deleted in new
chr7	94394560	94431232	chr7:94394560-94431232	3	+	94395031	94430393	0	52	541,11,15,36,93,54,45,54,54,54,54,54,45,54,45,54,99,45,99,54,108,54,99,54,99,54,54,54,54,45,99,108,54,54,54,54,108,54,54,162,108,108,54,108,54,108,54,108,259,185,243,986,	0,3187,3821,4488,5635,7006,9995,10132,10278,10638,11112,11689,13286,13622,13775,14209,14761,15003,15162,15681,15859,16328,16495,17507,18023,18522,19129,19333,19661,20665,21844,23163,23938,24937,25672,25830,25980,26448,27338,28396,29775,30556,31049,31189,31437,31862,32447,32627,33066,33732,34627,35686,
#Partially deleted in new
chr7	94394913	94430703	chr7:94394913-94430703	1	+	94395031	94430393	789624	52	188,5,15,36,93,54,45,54,54,54,54,54,45,54,45,54,99,45,99,54,108,54,99,54,99,54,54,54,54,45,99,108,54,54,54,54,108,54,54,162,108,108,54,108,54,108,54,108,259,185,243,457,	0,3460,3468,4135,5282,6653,9642,9779,9925,10285,10759,11336,12933,13269,13422,13856,14408,14650,14809,15328,15506,15975,16142,17154,17670,18169,18776,18980,19308,20312,21491,22810,23585,24584,25319,25477,25627,26095,26985,28043,29422,30203,30696,30836,31084,31509,32094,32274,32713,33379,34274,35333,
#Deleted in new
chr7	94413708	94416810	chr7:94413708-94416810	0	+	94413708	94413708	8553170	5	35,54,54,45,406,	0,185,513,1517,2696,
#Deleted in new
chr7	94414219	94422040	chr7:94414219-94422040	0	+	94414219	94414219	8553170	11	56,45,99,108,54,54,54,54,108,54,142,	0,1006,2185,3504,4279,5278,6013,6171,6321,6789,7679,
#Deleted in new
chr7	94417463	94423118	chr7:94417463-94423118	0	+	94417463	94417463	8553170	9	368,54,54,54,54,108,54,54,162,	0,1035,2034,2769,2927,3077,3545,4435,5493,
#Deleted in new
chr7	94417771	94421400	chr7:94417771-94421400	0	+	94417771	94417771	8553170	7	60,54,54,54,54,108,392,	0,727,1726,2461,2619,2769,3237,
#Deleted in new
chr7	94419452	94421046	chr7:94419452-94421046	0	+	94419452	94419452	8553170	4	99,54,54,506,	0,780,938,1088,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	94422470	94430688	chr7:94422470-94430688	0	+	94422470	94422470	8553170	8	2754,54,108,54,639,698,185,1501,	0,3139,3279,3527,3952,4717,5822,6717,
#Deleted in new
chr7	94423987	94425787	chr7:94423987-94425787	0	+	94423987	94423987	8553170	4	456,108,54,38,	0,1129,1622,1762,
#Deleted in new
chr7	94425269	94426729	chr7:94425269-94426729	0	+	94425269	94425269	8553170	4	394,108,54,307,	0,480,728,1153,
#Deleted in new
chr7	94426509	94427492	chr7:94426509-94427492	0	+	94426509	94426509	8553170	3	21,54,305,	0,498,678,
#Deleted in new
chr7	94426782	94427507	chr7:94426782-94427507	0	+	94426782	94426782	8553170	2	279,320,	0,405,
#Deleted in new
chr7	94427311	94430367	chr7:94427311-94430367	0	+	94427311	94427311	8553170	4	574,185,243,121,	0,981,1876,2935,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	94495298	94495404	chr7:94495298-94495404	3	+	94495298	94495298	8553170	1	106,	0,
#Partially deleted in new
chr7	94509218	94533758	chr7:94509218-94533758	0	+	94517633	94533758	789624	7	81,97,121,45,63,45,80,	0,8341,8984,17943,18969,23986,24460,
#Partially deleted in new
chr7	94509797	94557019	chr7:94509797-94557019	3	+	94510084	94555758	789624	18	420,97,121,45,63,45,124,215,423,90,120,157,80,102,141,78,93,1528,	0,7762,8405,17364,18390,23407,23881,25511,27674,29169,34613,35747,37298,39735,41540,42552,44685,45694,
#Partially deleted in new
chr7	94510067	94535522	chr7:94510067-94535522	0	+	94510084	94527166	789624	6	150,45,63,45,124,214,	0,17094,18120,23137,23611,25241,
#Partially deleted in new
chr7	94510070	94528250	chr7:94510070-94528250	0	+	94510084	94528224	789624	4	147,97,45,63,	0,7489,17091,18117,
#Partially deleted in new
chr7	94524203	94623350	chr7:94524203-94623350	0	-	94524203	94524203	8553170	7	70,44,189,212,163,199,26,	0,64485,74571,76442,79086,94554,99121,
#Partially deleted in new
chr7	94551732	94556966	chr7:94551732-94556966	0	+	94551732	94551732	8553170	3	695,93,1475,	0,2750,3759,
#Deleted in new
chr7	94553851	94556966	chr7:94553851-94556966	0	+	94553851	94553851	8553170	2	724,1475,	0,1640,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	94584979	94656126	chr7:94584979-94656126	1	-	94585464	94656098	789624	13	536,35,44,189,27,212,163,199,81,73,158,123,137,	0,2798,3709,13795,14717,15666,18310,33778,37566,38345,43222,44739,71010,
#Partially deleted in new
chr7	94585222	94656207	chr7:94585222-94656207	1	-	94585498	94656098	789624	10	293,44,189,212,163,199,73,158,123,218,	0,3466,13552,15423,18067,33535,38102,42979,44496,70767,
#Partially deleted in new
chr7	94585222	94656148	chr7:94585222-94656148	0	-	94623368	94656098	789624	9	293,44,189,27,212,163,199,73,159,	0,3466,13552,14474,15423,18067,33535,38102,70767,
#Partially deleted in new
chr7	94585223	94656218	chr7:94585223-94656218	3	-	94585498	94656098	789624	11	292,44,189,27,212,163,199,73,158,123,229,	0,3465,13551,14473,15422,18066,33534,38101,42978,44495,70766,
#Partially deleted in new
chr7	94585223	94603345	chr7:94585223-94603345	0	-	94587819	94603345	789624	7	292,107,44,189,27,212,56,	0,2554,3465,13551,14473,15422,18066,
#Partially deleted in new
chr7	94585223	94656207	chr7:94585223-94656207	1	-	94585464	94656098	789624	12	292,35,44,189,27,212,163,199,73,158,123,218,	0,2554,3465,13551,14473,15422,18066,33534,38101,42978,44495,70766,
#Partially deleted in new
chr7	94585223	94656123	chr7:94585223-94656123	1	-	94585498	94656098	789624	11	292,44,189,27,212,163,199,73,158,123,134,	0,3465,13551,14473,15422,18066,33534,38101,42978,44495,70766,
#Partially deleted in new
chr7	94585226	94599979	chr7:94585226-94599979	0	-	94585226	94585226	8553170	4	289,44,189,283,	0,3462,13548,14470,
#Partially deleted in new
chr7	94585229	94600740	chr7:94585229-94600740	0	-	94585511	94600740	789624	3	286,27,95,	0,14467,15416,
#Partially deleted in new
chr7	94585229	94656141	chr7:94585229-94656141	1	-	94585464	94656098	789624	11	286,35,44,189,212,163,199,73,158,123,152,	0,2548,3459,13545,15416,18060,33528,38095,42972,44489,70760,
#Partially deleted in new
chr7	94585229	94600674	chr7:94585229-94600674	0	-	94585498	94600674	789624	4	286,44,27,29,	0,3459,14467,15416,
#Partially deleted in new
chr7	94585229	94656140	chr7:94585229-94656140	1	-	94585498	94656098	789624	12	286,44,189,27,212,163,199,73,158,123,108,151,	0,3459,13545,14467,15416,18060,33528,38095,42972,44489,54111,70760,
#Partially deleted in new
chr7	94585236	94656177	chr7:94585236-94656177	1	-	94585498	94656098	789624	10	279,44,189,27,212,163,199,73,158,188,	0,3452,13538,14460,15409,18053,33521,38088,42965,70753,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	94585240	94656124	chr7:94585240-94656124	1	-	94585498	94656098	789624	11	275,44,189,212,163,199,81,73,158,123,135,	0,3448,13534,15405,18049,33517,37305,38084,42961,44478,70749,
#Partially deleted in new
chr7	94585246	94624542	chr7:94585246-94624542	0	-	94585246	94585246	8553170	9	269,35,44,189,27,212,163,199,1218,	0,2531,3442,13528,14450,15399,18043,33511,38078,
#Partially deleted in new
chr7	94585263	94623715	chr7:94585263-94623715	0	-	94585263	94585263	8553170	7	252,955,189,212,163,199,391,	0,2514,13511,15382,18026,33494,38061,
#Partially deleted in new
chr7	94585263	94656173	chr7:94585263-94656173	0	-	94644644	94656098	789624	12	252,44,189,27,212,163,199,73,158,123,62,184,	0,3425,13511,14433,15382,18026,33494,38061,42938,44455,59342,70726,
#Partially deleted in new
chr7	94585268	94624560	chr7:94585268-94624560	0	-	94585268	94585268	8553170	8	247,35,44,189,212,163,199,1236,	0,2509,3420,13506,15377,18021,33489,38056,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	94585268	94656186	chr7:94585268-94656186	1	-	94585498	94656098	789624	12	247,44,189,27,212,163,199,81,73,158,123,197,	0,3420,13506,14428,15377,18021,33489,37277,38056,42933,44450,70721,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	94585269	94656166	chr7:94585269-94656166	0	-	94639436	94656098	789624	12	246,44,189,212,163,199,73,158,123,108,68,177,	0,3419,13505,15376,18020,33488,38055,42932,44449,54071,55627,70720,
#Partially deleted in new
chr7	94585269	94656166	chr7:94585269-94656166	1	-	94587778	94656098	789624	11	246,72,44,189,212,163,199,73,158,123,177,	0,2508,3419,13505,15376,18020,33488,38055,42932,44449,70720,
#Partially deleted in new
chr7	94585273	94623351	chr7:94585273-94623351	0	-	94598894	94623351	789624	7	242,44,189,27,163,199,27,	0,3415,13501,14423,18016,33484,38051,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	94585279	94656096	chr7:94585279-94656096	0	-	94644644	94656096	789624	13	236,44,189,212,163,199,81,73,158,123,108,62,107,	0,3409,13495,15366,18010,33478,37266,38045,42922,44439,54061,59326,70710,
#Partially deleted in new
chr7	94585283	94619241	chr7:94585283-94619241	0	-	94585283	94585283	8553170	7	232,35,44,189,212,163,484,	0,2494,3405,13491,15362,18006,33474,
#Partially deleted in new
chr7	94585283	94656165	chr7:94585283-94656165	1	-	94585498	94656098	789624	11	232,44,189,212,163,199,73,158,123,108,176,	0,3405,13491,15362,18006,33474,38041,42918,44435,54057,70706,
#Partially deleted in new
chr7	94585283	94624678	chr7:94585283-94624678	0	-	94585283	94585283	8553170	8	232,44,189,27,212,163,199,1354,	0,3405,13491,14413,15362,18006,33474,38041,
#Partially deleted in new
chr7	94585283	94656210	chr7:94585283-94656210	1	-	94585464	94656098	789624	13	232,35,44,189,212,163,199,73,35,31,158,123,221,	0,2494,3405,13491,15362,18006,33474,38041,38237,38935,42918,44435,70706,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	94585283	94656146	chr7:94585283-94656146	1	-	94585498	94656098	789624	12	232,44,189,212,163,199,81,73,158,123,108,157,	0,3405,13491,15362,18006,33474,37262,38041,42918,44435,54057,70706,
#Partially deleted in new
chr7	94585283	94656101	chr7:94585283-94656101	1	-	94585464	94656098	789624	10	232,35,44,189,212,163,199,73,158,112,	0,2494,3405,13491,15362,18006,33474,38041,42918,70706,
#Partially deleted in new
chr7	94585283	94656131	chr7:94585283-94656131	0	-	94585283	94585283	8553170	11	232,955,189,27,212,163,199,73,158,123,142,	0,2494,13491,14413,15362,18006,33474,38041,42918,44435,70706,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	94585283	94626401	chr7:94585283-94626401	0	-	94585283	94585283	8553170	6	232,189,212,163,199,3077,	0,13491,15362,18006,33474,38041,
#Partially deleted in new
chr7	94585284	94656119	chr7:94585284-94656119	1	-	94585498	94656098	789624	9	231,44,189,212,163,199,73,158,130,	0,3404,13490,15361,18005,33473,38040,42917,70705,
#Partially deleted in new
chr7	94585284	94656096	chr7:94585284-94656096	0	-	94585498	94656096	789624	10	231,44,189,212,163,175,73,158,123,107,	0,3404,13490,15361,18005,33473,38040,42917,44434,70705,
#Partially deleted in new
chr7	94585291	94656572	chr7:94585291-94656572	1	-	94585464	94628318	789624	12	224,35,44,189,212,163,199,73,158,123,62,219,	0,2486,3397,13483,15354,17998,33466,38033,42910,44427,59314,71062,
#Partially deleted in new
chr7	94585293	94628272	chr7:94585293-94628272	0	-	94594524	94628272	789624	10	222,35,44,115,189,212,163,199,73,71,	0,2484,3395,9138,13481,15352,17996,33464,38031,42908,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	94585293	94628272	chr7:94585293-94628272	0	-	94621972	94628272	789624	11	222,35,44,189,212,163,199,147,81,73,71,	0,2484,3395,13481,15352,17996,33464,36555,37252,38031,42908,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	94585293	94656205	chr7:94585293-94656205	1	-	94587778	94656098	789624	13	222,72,44,189,27,212,163,199,81,73,158,123,216,	0,2484,3395,13481,14403,15352,17996,33464,37252,38031,42908,44425,70696,
#Partially deleted in new
chr7	94585293	94656160	chr7:94585293-94656160	1	-	94585464	94656098	789624	11	222,32,44,189,212,163,199,73,158,123,171,	0,2484,3395,13481,15352,17996,33464,38031,42908,44425,70696,
#Partially deleted in new
chr7	94585293	94656548	chr7:94585293-94656548	1	-	94585464	94628318	789624	11	222,35,44,189,212,163,199,73,158,123,195,	0,2484,3395,13481,15352,17996,33464,38031,42908,44425,71060,
#Partially deleted in new
chr7	94585293	94656169	chr7:94585293-94656169	1	-	94585498	94656098	789624	11	222,44,189,27,212,163,175,73,158,123,180,	0,3395,13481,14403,15352,17996,33464,38031,42908,44425,70696,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	94585293	94655993	chr7:94585293-94655993	0	-	94585464	94655993	789624	12	222,35,44,189,212,163,199,111,73,158,123,4,	0,2484,3395,13481,15352,17996,33464,37222,38031,42908,44425,70696,
#Partially deleted in new
chr7	94585298	94656125	chr7:94585298-94656125	0	-	94621972	94656098	789624	12	217,35,44,189,212,163,199,147,73,158,123,136,	0,2479,3390,13476,15347,17991,33459,36550,38026,42903,44420,70691,
#Partially deleted in new
chr7	94585300	94656186	chr7:94585300-94656186	0	-	94644644	94656098	789624	12	215,35,44,189,212,163,199,73,158,123,62,197,	0,2477,3388,13474,15345,17989,33457,38024,42901,44418,59305,70689,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	94585345	94590021	chr7:94585345-94590021	0	-	94585345	94585345	8553170	3	170,35,1333,	0,2432,3343,
#Partially deleted in new
chr7	94585345	94656079	chr7:94585345-94656079	0	-	94585464	94656079	789624	12	170,35,44,189,212,163,199,73,158,123,108,90,	0,2432,3343,13429,15300,17944,33412,37979,42856,44373,53995,70644,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	94585357	94656051	chr7:94585357-94656051	0	-	94585498	94656051	789624	11	158,44,189,212,163,199,111,73,158,123,62,	0,3331,13417,15288,17932,33400,37158,37967,42844,44361,70632,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	94585360	94656149	chr7:94585360-94656149	1	-	94585464	94656098	789624	12	155,35,44,189,212,163,199,81,73,158,123,160,	0,2417,3328,13414,15285,17929,33397,37185,37964,42841,44358,70629,
#Partially deleted in new
chr7	94585365	94629811	chr7:94585365-94629811	0	-	94599351	94629811	789624	11	150,44,189,74,27,212,163,199,73,158,93,	0,3323,13409,13961,14331,15280,17924,33392,37959,42836,44353,
#Partially deleted in new
chr7	94585365	94656127	chr7:94585365-94656127	0	-	94644644	94656098	789624	13	150,44,189,27,212,163,199,73,158,123,108,62,138,	0,3323,13409,14331,15280,17924,33392,37959,42836,44353,53975,59240,70624,
#Partially deleted in new
chr7	94585365	94656072	chr7:94585365-94656072	0	-	94587778	94656072	789624	12	150,72,44,189,27,212,163,199,73,158,123,83,	0,2412,3323,13409,14331,15280,17924,33392,37959,42836,44353,70624,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	94585370	94656166	chr7:94585370-94656166	0	-	94585370	94585370	8553170	9	145,189,27,212,163,199,5035,123,177,	0,13404,14326,15275,17919,33387,37954,44348,70619,
#Partially deleted in new
chr7	94585374	94656152	chr7:94585374-94656152	0	-	94599351	94656098	789624	13	141,35,44,189,74,27,212,163,199,73,158,123,163,	0,2403,3314,13400,13952,14322,15271,17915,33383,37950,42827,44344,70615,
#Partially deleted in new
chr7	94585374	94656166	chr7:94585374-94656166	0	-	94585374	94585374	8553170	10	141,955,189,212,163,199,73,158,123,177,	0,2403,13400,15271,17915,33383,37950,42827,44344,70615,
#Partially deleted in new
chr7	94585379	94644615	chr7:94585379-94644615	0	-	94585379	94585379	8553170	12	136,35,44,189,27,212,163,199,73,158,123,10,	0,2398,3309,13395,14317,15266,17910,33378,37945,42822,44339,59226,
#Partially deleted in new
chr7	94585381	94656147	chr7:94585381-94656147	0	-	94644644	94656098	789624	13	134,35,44,189,212,163,199,147,73,158,123,62,158,	0,2396,3307,13393,15264,17908,33376,36467,37943,42820,44337,59224,70608,
#Partially deleted in new
chr7	94585386	94624486	chr7:94585386-94624486	0	-	94585386	94585386	8553170	8	129,35,44,189,1161,163,199,1162,	0,2391,3302,13388,14310,17903,33371,37938,
#Partially deleted in new
chr7	94585397	94656045	chr7:94585397-94656045	0	-	94587778	94656045	789624	10	118,72,44,189,212,163,199,73,158,56,	0,2380,3291,13377,15248,17892,33360,37927,42804,70592,
#Partially deleted in new
chr7	94585398	94656009	chr7:94585398-94656009	0	-	94644644	94656009	789624	11	117,44,189,212,163,199,73,158,123,62,20,	0,3290,13376,15247,17891,33359,37926,42803,44320,59207,70591,
#Partially deleted in new
chr7	94585398	94656152	chr7:94585398-94656152	1	-	94585511	94656098	789624	11	117,189,27,212,163,199,73,158,123,108,163,	0,13376,14298,15247,17891,33359,37926,42803,44320,53942,70591,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	94585404	94624149	chr7:94585404-94624149	0	-	94585404	94585404	8553170	10	111,35,44,189,212,163,199,147,111,825,	0,2373,3284,13370,15241,17885,33353,36444,37111,37920,
#Partially deleted in new
chr7	94585409	94656096	chr7:94585409-94656096	0	-	94587778	94656096	789624	12	106,72,44,189,212,163,199,73,158,123,108,107,	0,2368,3279,13365,15236,17880,33348,37915,42792,44309,53931,70580,
#Partially deleted in new
chr7	94585438	94656105	chr7:94585438-94656105	1	-	94585464	94656098	789624	11	77,35,44,189,212,163,178,73,158,123,116,	0,2339,3250,13336,15207,17851,33319,37886,42763,44280,70551,
#Partially deleted in new
chr7	94585448	94656166	chr7:94585448-94656166	0	-	94585448	94585448	8553170	11	67,35,44,189,212,163,199,925,158,123,177,	0,2329,3240,13326,15197,17841,33309,37876,42753,44270,70541,
#Partially deleted in new
chr7	94585469	94599137	chr7:94585469-94599137	0	-	94585469	94585469	8553170	3	46,44,363,	0,3219,13305,
#Partially deleted in new
chr7	94585489	94620455	chr7:94585489-94620455	0	-	94585489	94585489	8553170	6	26,44,189,212,163,1698,	0,3199,13285,15156,17800,33268,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	94586535	94656149	chr7:94586535-94656149	1	-	94588677	94656098	789624	9	2197,189,212,163,199,73,158,123,160,	0,12239,14110,16754,32222,36789,41666,43183,69454,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	94586584	94656175	chr7:94586584-94656175	1	-	94587705	94656098	789624	10	1228,44,189,212,163,199,73,158,123,186,	0,2104,12190,14061,16705,32173,36740,41617,43134,69405,
#Partially deleted in new
chr7	94588202	94656186	chr7:94588202-94656186	1	-	94588677	94656098	789624	11	530,189,27,212,163,199,73,158,123,108,197,	0,10572,11494,12443,15087,30555,35122,39999,41516,51138,67787,
#Partially deleted in new
chr7	94588707	94656045	chr7:94588707-94656045	0	-	94588707	94656045	789624	10	25,189,27,212,163,178,73,158,123,56,	0,10067,10989,11938,14582,30050,34617,39494,41011,67282,
#Partially deleted in new
chr7	94590524	94603327	chr7:94590524-94603327	0	-	94590524	94590524	8553170	5	349,189,27,212,38,	0,8250,9172,10121,12765,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	94597224	94656136	chr7:94597224-94656136	1	-	94598770	94656098	789624	10	1739,27,212,163,199,73,158,123,108,147,	0,2472,3421,6065,21533,26100,30977,32494,42116,58765,
#Partially deleted in new
chr7	94598382	94656145	chr7:94598382-94656145	1	-	94598770	94656098	789624	9	581,27,212,163,199,73,158,123,156,	0,1314,2263,4907,20375,24942,29819,31336,57607,
#Partially deleted in new
chr7	94598462	94656197	chr7:94598462-94656197	1	-	94598770	94656098	789624	8	501,212,163,199,73,158,123,208,	0,2183,4827,20295,24862,29739,31256,57527,
#Partially deleted in new
chr7	94598836	94656165	chr7:94598836-94656165	0	-	94644644	94656098	789624	8	127,27,212,163,73,158,62,176,	0,860,1809,4453,24488,29365,45769,57153,
#Partially deleted in new
chr7	94598935	94656147	chr7:94598935-94656147	0	-	94623368	94656098	789624	6	28,27,212,163,73,158,	0,761,1710,4354,24389,57054,
#Partially deleted in new
chr7	94599706	94656080	chr7:94599706-94656080	0	-	94603375	94656080	789624	7	17,212,163,73,158,123,91,	0,939,3583,23618,28495,30012,56283,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	94600789	94628312	chr7:94600789-94628312	0	-	94621972	94628312	789624	7	68,163,199,147,111,73,111,	0,2500,17968,21059,21726,22535,27412,
#Partially deleted in new
chr7	94600809	94618964	chr7:94600809-94618964	0	-	94600809	94600809	8553170	3	48,163,207,	0,2480,17948,
#Partially deleted in new
chr7	94600847	94656128	chr7:94600847-94656128	0	-	94644644	94656098	789624	7	10,163,199,73,158,62,139,	0,2442,17910,22477,27354,43758,55142,
#Partially deleted in new
chr7	94616866	94656152	chr7:94616866-94656152	0	-	94616866	94616866	8553170	5	2090,73,158,123,163,	0,6458,11335,12852,39123,
#Partially deleted in new
chr7	94618758	94656147	chr7:94618758-94656147	0	-	94629747	94656098	789624	5	198,73,158,103,158,	0,4566,9443,10960,37231,
#Partially deleted in new
chr7	94618806	94629812	chr7:94618806-94629812	0	-	94618806	94618806	8553170	4	194,73,158,94,	0,4518,9395,10912,
#Partially deleted in new
chr7	94618807	94656039	chr7:94618807-94656039	0	-	94618807	94618807	8553170	4	149,73,123,50,	0,4517,10911,37182,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	94620398	94623449	chr7:94620398-94623449	0	-	94620398	94620398	8553170	2	2228,125,	0,2926,
#Deleted in new
chr7	94626695	94629895	chr7:94626695-94629895	0	-	94626695	94626695	8553170	2	28,1694,	0,1506,
#Partially deleted in new
chr7	94626825	94656141	chr7:94626825-94656141	0	-	94644644	94656098	789624	5	1534,123,108,62,152,	0,2893,12515,17780,29164,
#Partially deleted in new
chr7	94627058	94656165	chr7:94627058-94656165	0	-	94627058	94627058	8553170	2	1301,176,	0,28931,
#Deleted in new
chr7	94656324	94669695	chr7:94656324-94669695	3	+	94663556	94664534	789624	2	256,6362,	0,7009,
#Deleted in new
chr7	94656369	94665698	chr7:94656369-94665698	1	+	94656586	94664534	789624	2	222,2365,	0,6964,
#Deleted in new
chr7	94656369	94669637	chr7:94656369-94669637	0	+	94656369	94656369	8553170	3	211,96,456,	0,6964,12812,
#Deleted in new
chr7	94656369	94665698	chr7:94656369-94665698	1	+	94656586	94665682	789624	3	222,1174,1189,	0,6964,8140,
#Deleted in new
chr7	94656383	94663650	chr7:94656383-94663650	0	+	94663556	94663650	789624	3	197,60,317,	0,4654,6950,
#Deleted in new
chr7	94656545	94669692	chr7:94656545-94669692	1	+	94663454	94665682	789624	3	35,1174,5183,	0,6788,7964,
#Deleted in new
chr7	94656545	94669692	chr7:94656545-94669692	1	+	94663454	94664534	789624	2	35,6359,	0,6788,
#Deleted in new
chr7	94656545	94669692	chr7:94656545-94669692	1	+	94663556	94665682	789624	3	35,1174,5183,	0,6788,7964,
#Deleted in new
chr7	94664734	94669180	chr7:94664734-94669180	0	+	94664734	94664734	8553170	2	341,447,	0,3999,
#Deleted in new
chr7	94695026	94695819	chr7:94695026-94695819	7	-	94695026	94695026	16724991	1	793,	0,
#Partially deleted in new
chr7	94712408	94712511	chr7:94712408-94712511	3	+	94712408	94712408	8553170	1	103,	0,
#Deleted in new
chr7	94738651	94739411	chr7:94738651-94739411	7	+	94738651	94738651	16724991	1	760,	0,
#Deleted in new
chr7	94782885	94783525	chr7:94782885-94783525	7	+	94782885	94782885	16724991	1	640,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	94801513	94801812	chr7:94801513-94801812	3	+	94801513	94801513	8553170	1	299,	0,
#Partially deleted in new
chr7	94833903	94834447	chr7:94833903-94834447	7	+	94833903	94833903	16724991	1	544,	0,
#Deleted in new
chr7	94907201	94910332	chr7:94907201-94910332	0	+	94910113	94910332	789624	2	120,435,	0,2696,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	94907636	95296413	chr7:94907636-95296413	3	+	94910113	95290303	0	16	66,1611,133,121,105,136,156,54,230,97,172,158,120,24,183,6323,	0,2261,203622,213075,254230,290712,318324,339836,342389,344125,344322,360913,378569,379473,380899,382454,
#Partially deleted in new
chr7	94907636	95291265	chr7:94907636-95291265	1	+	94910113	95290303	0	20	66,1611,133,121,105,136,66,156,54,230,97,172,158,301,88,84,313,120,183,1175,	0,2261,203622,213075,254230,290712,296028,318324,339836,342389,344125,344322,360913,361570,366262,366448,376381,378569,380899,382454,
#Partially deleted in new
chr7	94907674	95290355	chr7:94907674-95290355	1	+	94910113	95290303	0	18	28,1611,133,121,105,136,156,54,230,97,172,158,301,88,84,199,120,265,	0,2223,203584,213037,254192,290674,318286,339798,342351,344087,344284,360875,361532,366224,366410,376343,378531,382416,
#Deleted in new
chr7	94907967	94910237	chr7:94907967-94910237	0	+	94910113	94910237	789624	2	172,340,	0,1930,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	94908278	95296402	chr7:94908278-95296402	1	+	94910113	95290303	0	16	316,1611,133,121,105,136,156,54,230,97,172,158,120,24,183,6312,	0,1619,202980,212433,253588,290070,317682,339194,341747,343483,343680,360271,377927,378831,380257,381812,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr7	94909897	95296415	chr7:94909897-95296415	1	+	94910113	95290303	0	17	1611,133,121,105,136,156,54,230,97,172,158,301,88,84,199,120,6325,	0,201361,210814,251969,288451,316063,337575,340128,341864,342061,358652,359309,364001,364187,374120,376308,380193,
#Partially deleted in new
chr7	94910082	95290364	chr7:94910082-95290364	1	+	94910113	95290303	0	18	1426,133,121,105,136,156,54,230,97,172,158,247,88,84,199,120,183,274,	0,201176,210629,251784,288266,315878,337390,339943,341679,341876,358467,359178,363816,364002,373935,376123,378453,380008,
#Partially deleted in new
chr7	95018162	95018397	chr7:95018162-95018397	7	-	95018162	95018162	16724991	1	235,	0,
#Partially deleted in new
chr7	95018406	95018554	chr7:95018406-95018554	7	+	95018406	95018406	16724991	1	148,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	95035730	95214332	chr7:95035730-95214332	3	-	95035730	95035730	8553170	5	1381,75,143,39,148,	0,73136,139216,140762,178454,
#Partially deleted in new
chr7	95036535	95214332	chr7:95036535-95214332	0	-	95036535	95036535	8553170	2	246,148,	0,177649,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	95154712	95214332	chr7:95154712-95214332	1	-	95154712	95154712	8553170	4	2239,143,39,148,	0,20234,21780,59472,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	95297675	95324707	chr7:95297675-95324707	3	-	95298943	95324475	0	9	1427,129,82,201,127,169,56,71,306,	0,4529,8609,10335,13775,17646,19058,20647,26726,
#Partially deleted in new
chr7	95298748	95302403	chr7:95298748-95302403	0	-	95298748	95298748	8553170	2	354,199,	0,3456,
#Partially deleted in new
chr7	95298913	95324476	chr7:95298913-95324476	0	-	95315416	95324475	789624	9	189,129,82,201,127,128,56,71,75,	0,3291,7371,9097,12537,16408,17820,19409,25488,
#Partially deleted in new
chr7	95311489	95318587	chr7:95311489-95318587	0	-	95311489	95311489	8553170	4	88,169,56,265,	0,3832,5244,6833,
#Partially deleted in new
chr7	95348717	95348910	chr7:95348717-95348910	7	-	95348717	95348717	16724991	1	193,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	95350163	95351229	chr7:95350163-95351229	7	+	95350163	95350163	16724991	1	1066,	0,
#Partially deleted in new
chr7	95359943	95396361	chr7:95359943-95396361	1	-	95359972	95396350	789624	9	188,129,82,201,127,166,56,71,85,	0,2418,2816,3919,7418,12229,30210,34700,36333,
#Partially deleted in new
chr7	95359943	95396361	chr7:95359943-95396361	3	-	95360088	95396350	789624	7	188,201,127,166,56,71,85,	0,3919,7418,12229,30210,34700,36333,
#Partially deleted in new
chr7	95359945	95396363	chr7:95359945-95396363	0	-	95394669	95396350	789624	8	186,129,82,201,166,56,93,87,	0,2416,2814,3917,12227,30208,34698,36331,
#Partially deleted in new
chr7	95359945	95396363	chr7:95359945-95396363	0	-	95394669	95396350	789624	9	186,129,82,201,127,166,56,93,87,	0,2416,2814,3917,7416,12227,30208,34698,36331,
#Partially deleted in new
chr7	95359945	95396363	chr7:95359945-95396363	1	-	95362402	95396350	789624	9	186,77,82,201,127,166,56,71,87,	0,2416,2814,3917,7416,12227,30208,34698,36331,
#Partially deleted in new
chr7	95359945	95396363	chr7:95359945-95396363	0	-	95372297	95396350	789624	8	186,129,82,201,127,166,71,87,	0,2416,2814,3917,7416,12227,34698,36331,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	95359960	95365913	chr7:95359960-95365913	0	-	95359960	95359960	8553170	4	171,129,82,2051,	0,2401,2799,3902,
#Deleted in new
chr7	95359986	95362798	chr7:95359986-95362798	0	-	95359986	95359986	8553170	2	145,437,	0,2375,
#Partially deleted in new
chr7	95404862	95435072	chr7:95404862-95435072	1	-	95405329	95434951	789624	9	626,129,82,201,127,166,56,71,195,	0,1256,2124,5038,6790,7449,11379,19652,30015,
#Partially deleted in new
chr7	95404866	95434991	chr7:95404866-95434991	0	-	95407050	95434951	789624	9	622,129,82,148,127,166,56,71,114,	0,1252,2120,5087,6786,7445,11375,19648,30011,
#Partially deleted in new
chr7	95404879	95435198	chr7:95404879-95435198	1	-	95405329	95434951	789624	9	609,129,82,201,91,166,56,71,321,	0,1239,2107,5021,6773,7432,11362,19635,29998,
#Partially deleted in new
chr7	95404896	95435198	chr7:95404896-95435198	3	-	95405329	95434951	789624	9	592,129,82,201,127,166,56,71,321,	0,1222,2090,5004,6756,7415,11345,19618,29981,
#Partially deleted in new
chr7	95404896	95435329	chr7:95404896-95435329	1	-	95405329	95435014	789624	9	592,129,82,201,127,166,56,71,452,	0,1222,2090,5004,6756,7415,11345,19618,29981,
#Partially deleted in new
chr7	95405277	95411703	chr7:95405277-95411703	0	-	95406239	95411703	789624	5	211,154,82,201,51,	0,841,1709,4623,6375,
#Partially deleted in new
chr7	95405338	95434976	chr7:95405338-95434976	0	-	95416237	95434951	789624	9	150,129,82,201,127,166,74,71,99,	0,780,1648,4562,6314,6973,10833,19176,29539,
#Deleted in new
chr7	95409506	95411684	chr7:95409506-95411684	0	-	95409506	95409506	8553170	2	595,32,	0,2146,
#Partially deleted in new
chr7	95409996	95434998	chr7:95409996-95434998	0	-	95409996	95412420	789624	5	105,127,166,126,121,	0,1656,2315,6175,24881,
#Partially deleted in new
chr7	95411650	95434951	chr7:95411650-95434951	0	-	95416187	95434951	789624	5	129,166,126,71,74,	0,661,4521,12864,23227,
#Partially deleted in new
chr7	95411681	95435126	chr7:95411681-95435126	0	-	95411681	95412420	789624	5	98,150,126,71,249,	0,630,4490,12833,23196,
#Partially deleted in new
chr7	95411703	95435008	chr7:95411703-95435008	0	-	95416187	95434951	789624	5	76,166,126,71,131,	0,608,4468,12811,23174,
#Partially deleted in new
chr7	95411729	95435009	chr7:95411729-95435009	0	-	95411729	95412420	789624	6	50,166,56,71,75,132,	0,582,4512,12785,22529,23148,
#Partially deleted in new
chr7	95412323	95434951	chr7:95412323-95434951	0	-	95412323	95412420	789624	6	154,125,56,71,75,74,	0,2824,3918,12191,21935,22554,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	95412743	95434951	chr7:95412743-95434951	0	-	95412743	95412743	8553170	4	368,56,71,74,	0,3498,11771,22134,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	95415875	95434963	chr7:95415875-95434963	0	-	95415875	95415875	8553170	3	422,71,86,	0,8639,19002,
#Deleted in new
chr7	95416107	95416462	chr7:95416107-95416462	3	+	95416107	95416107	8553170	1	355,	0,
#Partially deleted in new
chr7	95418175	95435030	chr7:95418175-95435030	0	-	95418175	95418175	8553170	3	227,71,153,	0,6339,16702,
#Partially deleted in new
chr7	95424163	95435028	chr7:95424163-95435028	0	-	95424163	95424163	8553170	2	422,151,	0,10714,
#Partially deleted in new
chr7	95471834	95473998	chr7:95471834-95473998	3	+	95471834	95471834	8553170	2	228,306,	0,1858,
#Partially deleted in new
chr7	95478443	95496182	chr7:95478443-95496182	0	+	95478443	95478443	8553170	2	157,425,	0,17314,
#Partially deleted in new
chr7	95485900	95540232	chr7:95485900-95540232	3	+	95485971	95537759	789624	5	258,300,491,114,2662,	0,9857,41912,50536,51670,
#Partially deleted in new
chr7	95485900	95528801	chr7:95485900-95528801	1	+	95485971	95528375	789624	3	258,300,989,	0,9857,41912,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	95542144	95544542	chr7:95542144-95544542	3	+	95542144	95542144	8553170	1	2398,	0,
#Partially deleted in new
chr7	95583498	95596491	chr7:95583498-95596491	3	-	95585640	95596293	0	11	2283,114,111,99,77,78,87,185,72,142,328,	0,3511,3919,4228,6141,8489,9012,9261,10200,11524,12665,
#Partially deleted in new
chr7	95584374	95592760	chr7:95584374-95592760	0	-	95584374	95584374	8553170	7	1407,114,111,99,77,78,250,	0,2635,3043,3352,5265,7613,8136,
#Deleted in new
chr7	95586679	95587545	chr7:95586679-95587545	0	-	95586679	95586679	8553170	2	444,128,	0,738,
#Partially deleted in new
chr7	95587483	95589717	chr7:95587483-95589717	0	-	95587483	95587483	8553170	2	342,78,	0,2156,
#Deleted in new
chr7	95594770	95596460	chr7:95594770-95596460	0	-	95594770	95594770	8553170	2	394,297,	0,1393,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	95596681	95607144	chr7:95596681-95607144	0	+	95596681	95596681	8553170	2	102,205,	0,10258,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	95596681	95613719	chr7:95596681-95613719	3	+	95596681	95596681	8553170	2	102,669,	0,16369,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	95609795	95613541	chr7:95609795-95613541	0	+	95609795	95609795	8553170	2	67,491,	0,3255,
#Partially deleted in new
chr7	95772553	96098424	chr7:95772553-96098424	1	+	95804729	96097593	789624	17	220,117,115,91,60,116,90,163,100,126,147,114,134,145,141,126,942,	0,32167,37838,40693,55503,97329,204958,212261,214502,223394,255621,260113,263065,266723,303503,307809,324929,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	95772578	95813279	chr7:95772578-95813279	0	+	95804729	95813279	789624	5	195,115,117,115,33,	0,30101,32142,37813,40668,
#Partially deleted in new
chr7	95772589	96098412	chr7:95772589-96098412	1	+	95804729	96097593	789624	17	184,117,115,142,60,116,90,163,100,126,147,114,134,145,141,126,930,	0,32131,37802,40606,55467,97293,204922,212225,214466,223358,255585,260077,263029,266687,303467,307773,324893,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	95772593	96110322	chr7:95772593-96110322	1	+	95804729	96110071	789624	16	180,117,115,91,116,90,163,100,126,147,114,134,145,141,126,344,	0,32127,37798,40653,97289,204918,212221,214462,223354,255581,260073,263025,266683,303463,307769,337385,
#Partially deleted in new
chr7	95772596	96098424	chr7:95772596-96098424	1	+	95804729	96097593	789624	16	177,117,115,142,116,90,163,100,126,147,114,134,145,141,126,942,	0,32124,37795,40599,97286,204915,212218,214459,223351,255578,260070,263022,266680,303460,307766,324886,
#Partially deleted in new
chr7	95772597	96098424	chr7:95772597-96098424	3	+	95804729	96097593	789624	16	176,117,115,91,116,90,163,100,126,147,114,134,145,141,126,942,	0,32123,37794,40649,97285,204914,212217,214458,223350,255577,260069,263021,266679,303459,307765,324885,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	95772603	95818963	chr7:95772603-95818963	1	+	95804729	95818535	789624	5	170,117,115,91,465,	0,32117,37788,40643,45895,
#Partially deleted in new
chr7	95804217	95828128	chr7:95804217-95828128	0	+	95804729	95828128	789624	5	145,117,115,91,72,	0,503,6174,9029,23839,
#Partially deleted in new
chr7	95804283	96097999	chr7:95804283-96097999	1	+	95804729	96097593	789624	17	91,117,115,91,60,116,90,163,100,126,147,114,134,145,141,126,517,	0,437,6108,8963,23773,65599,173228,180531,182772,191664,223891,228383,231335,234993,271773,276079,293199,
#Partially deleted in new
chr7	96032666	96056164	chr7:96032666-96056164	0	+	96032666	96032666	8553170	4	114,134,145,397,	0,2952,6610,23101,
#Deleted in new
chr7	96118646	96119995	chr7:96118646-96119995	3	+	96118646	96118646	8553170	1	1349,	0,
#Partially deleted in new
chr7	96120219	96322093	chr7:96120219-96322093	3	-	96121190	96321956	0	18	1158,91,159,139,141,81,53,159,85,85,94,139,147,140,116,143,54,152,	0,1435,1619,11523,26336,49825,51252,64057,64707,69074,69361,70889,72817,88618,114582,156976,176678,201722,
#Partially deleted in new
chr7	96120220	96322147	chr7:96120220-96322147	1	-	96121190	96321956	0	18	1157,91,159,139,141,81,53,159,88,85,94,139,147,140,116,143,54,206,	0,1434,1618,11522,26335,49824,51251,64056,64706,69073,69360,70888,72816,88617,114581,156975,176677,201721,
#Deleted in new
chr7	96120955	96121998	chr7:96120955-96121998	0	-	96120955	96120955	8553170	2	422,344,	0,699,
#Partially deleted in new
chr7	96146553	96185011	chr7:96146553-96185011	0	-	96146553	96146553	8553170	6	143,57,81,53,159,85,	0,20368,23491,24918,37723,38373,
#Partially deleted in new
chr7	96169867	96189379	chr7:96169867-96189379	0	-	96169867	96169867	8553170	6	76,81,53,159,85,86,	0,177,1604,14409,15059,19426,
#Partially deleted in new
chr7	96170043	96184574	chr7:96170043-96184574	0	-	96170043	96170043	8553170	3	82,53,298,	0,1428,14233,
#Partially deleted in new
chr7	96193147	96322136	chr7:96193147-96322136	0	-	96208967	96321956	789624	5	36,140,143,54,195,	0,15690,84048,103750,128794,
#Deleted in new
chr7	96219661	96219756	chr7:96219661-96219756	3	-	96219661	96219661	5263520	1	95,	0,
#Deleted in new
chr7	96283356	96283804	chr7:96283356-96283804	7	+	96283356	96283356	16724991	1	448,	0,
#Partially deleted in new
chr7	96296897	96309684	chr7:96296897-96309684	0	-	96296897	96296897	8553170	2	54,147,	0,12640,
#Deleted in new
chr7	96306809	96306874	chr7:96306809-96306874	7	+	96306809	96306809	16724991	1	65,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	96330637	96330744	chr7:96330637-96330744	3	+	96330637	96330637	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	96341139	96341246	chr7:96341139-96341246	3	+	96341139	96341139	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	96377856	96377920	chr7:96377856-96377920	3	+	96377856	96377856	8553170	1	64,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	96481625	96496342	chr7:96481625-96496342	1	-	96483858	96496295	789624	4	2363,30,215,59,	0,3199,4577,14658,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	96481625	96503523	chr7:96481625-96503523	0	-	96481625	96481625	8553170	5	2363,30,215,58,41,	0,3199,4577,14658,21857,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	96481625	96496342	chr7:96481625-96496342	1	-	96483858	96496295	789624	3	2363,215,59,	0,4577,14658,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	96483712	96503510	chr7:96483712-96503510	0	-	96483712	96483712	8553170	4	276,215,58,28,	0,2490,12571,19770,
#Partially deleted in new
chr7	96486205	96709812	chr7:96486205-96709812	0	-	96506682	96709763	789624	4	212,76,94,125,	0,20417,208592,223482,
#Partially deleted in new
chr7	96486271	96709775	chr7:96486271-96709775	0	-	96656578	96709763	789624	6	146,58,76,129,94,88,	0,10012,20351,170185,208526,223416,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	96486271	96709775	chr7:96486271-96709775	0	-	96558156	96709763	789624	5	146,76,140,94,88,	0,20351,71845,208526,223416,
#Partially deleted in new
chr7	96486271	96709775	chr7:96486271-96709775	0	-	96506682	96709763	789624	5	146,58,76,94,88,	0,10012,20351,208526,223416,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	96486272	96709775	chr7:96486272-96709775	0	-	96637275	96709763	789624	6	145,76,140,67,94,88,	0,20350,71844,150967,208525,223415,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	96621656	96664338	chr7:96621656-96664338	0	-	96621656	96621656	789624	5	987,213,112,129,136,	0,24067,25772,34800,42546,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	96622429	96645932	chr7:96622429-96645932	0	-	96622429	96622429	8553170	3	214,152,209,	0,523,23294,
#Partially deleted in new
chr7	96622561	96709861	chr7:96622561-96709861	1	-	96622615	96709763	789624	3	82,94,174,	0,72236,87126,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	96645389	96664285	chr7:96645389-96664285	0	-	96645389	96645389	8553170	4	543,130,129,83,	0,8319,11067,18813,
#Partially deleted in new
chr7	96645390	96709780	chr7:96645390-96709780	1	-	96645739	96709763	789624	3	542,94,93,	0,49407,64297,
#Partially deleted in new
chr7	96645587	96709826	chr7:96645587-96709826	1	-	96645932	96709763	789624	3	349,94,139,	0,49210,64100,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	96645822	96664245	chr7:96645822-96664245	0	-	96645822	96645822	8553170	5	114,112,94,129,79,	0,1606,7922,10634,18344,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	96645837	96664285	chr7:96645837-96664285	0	-	96645837	96645837	8553170	5	95,112,130,129,83,	0,1591,7871,10619,18365,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	96649194	96709858	chr7:96649194-96709858	1	-	96650500	96709763	789624	3	1325,94,171,	0,45603,60493,
#Partially deleted in new
chr7	96672563	96709880	chr7:96672563-96709880	0	-	96673759	96709763	789624	5	245,53,114,94,193,	0,336,1182,22234,37124,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	96673248	96709851	chr7:96673248-96709851	1	-	96673842	96709763	789624	2	611,164,	0,36439,
#Partially deleted in new
chr7	96673456	96709851	chr7:96673456-96709851	1	-	96673759	96709763	789624	3	403,94,164,	0,21341,36231,
#Partially deleted in new
chr7	96687950	96709891	chr7:96687950-96709891	3	-	96688923	96709763	0	3	1016,94,204,	0,6847,21737,
#Partially deleted in new
chr7	96688768	96697372	chr7:96688768-96697372	0	-	96688768	96688768	8553170	2	198,2575,	0,6029,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	96706221	96709873	chr7:96706221-96709873	0	-	96706221	96706221	8553170	3	174,67,186,	0,1926,3466,
#Deleted in new
chr7	96858181	96859618	chr7:96858181-96859618	7	+	96858181	96858181	16724991	1	1437,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	96940067	96940364	chr7:96940067-96940364	3	-	96940067	96940067	8553170	1	297,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	96955140	97014065	chr7:96955140-97014065	3	-	96955140	96955140	789624	3	13978,1245,141,	0,23206,58784,
#Deleted in new
chr7	96965301	96965481	chr7:96965301-96965481	3	+	96965301	96965301	8553170	1	180,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	96965433	97014064	chr7:96965433-97014064	0	-	96965433	96965433	8553170	2	3685,140,	0,48491,
#Deleted in new
chr7	96965488	96965695	chr7:96965488-96965695	3	+	96965488	96965488	8553170	1	207,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	96965526	97004298	chr7:96965526-97004298	0	-	96965526	96965526	8553170	2	3592,790,	0,37982,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	96965526	97014060	chr7:96965526-97014060	0	-	96965526	96965526	8553170	3	3592,123,136,	0,46654,48398,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	96965526	97014025	chr7:96965526-97014025	0	-	96965526	96965526	8553170	3	3592,479,101,	0,46298,48398,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	96968526	97011882	chr7:96968526-97011882	0	-	96968526	96968526	8553170	3	592,508,58,	0,10557,43298,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	96978467	97012049	chr7:96978467-97012049	0	-	96978467	96978467	8553170	2	1124,225,	0,33357,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	96979080	97011882	chr7:96979080-97011882	0	-	96979080	96979080	8553170	2	507,58,	0,32744,
#Deleted in new
chr7	97005547	97011039	chr7:97005547-97011039	3	+	97005977	97010047	789624	3	866,194,1244,	0,2090,4248,
#Deleted in new
chr7	97006492	97010176	chr7:97006492-97010176	0	+	97006492	97006492	8553170	3	1037,194,381,	0,1145,3303,
#Deleted in new
chr7	97007424	97010054	chr7:97007424-97010054	1	+	97007585	97010047	789624	2	407,259,	0,2371,
#Deleted in new
chr7	97013924	97014066	chr7:97013924-97014066	3	-	97013924	97013924	8553170	1	142,	0,
#Deleted in new
chr7	97020391	97024831	chr7:97020391-97024831	3	-	97020735	97024623	0	3	674,185,563,	0,1793,3877,
#Deleted in new
chr7	97020395	97024831	chr7:97020395-97024831	1	-	97020735	97024623	8553170	3	670,185,563,	0,1789,3873,
#Deleted in new
chr7	97020665	97024827	chr7:97020665-97024827	0	-	97020665	97020665	8553170	3	400,103,559,	0,1519,3603,
#Deleted in new
chr7	97021977	97024950	chr7:97021977-97024950	1	-	97022148	97024623	0	2	392,682,	0,2291,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	97116589	97181763	chr7:97116589-97181763	3	+	97117723	97181215	789624	2	1308,752,	0,64422,
#Partially deleted in new
chr7	97117700	97142835	chr7:97117700-97142835	0	+	97117700	97117700	8553170	2	197,163,	0,24972,
#Partially deleted in new
chr7	97117722	97181487	chr7:97117722-97181487	1	+	97117723	97136420	789624	3	175,80,476,	0,18665,63289,
#Deleted in new
chr7	97135014	97135561	chr7:97135014-97135561	7	-	97135014	97135014	16724991	1	547,	0,
#Partially deleted in new
chr7	97142680	97181647	chr7:97142680-97181647	0	+	97142680	97142680	8553170	2	138,636,	0,38331,
#Deleted in new
chr7	97200707	97201483	chr7:97200707-97201483	7	-	97200707	97200707	16724991	1	776,	0,
#Deleted in new
chr7	97437517	97437896	chr7:97437517-97437896	7	+	97437517	97437517	16724991	1	379,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	97598932	97599260	chr7:97598932-97599260	3	-	97598932	97598932	8553170	1	328,	0,
#Partially deleted in new
chr7	97731907	97740472	chr7:97731907-97740472	3	+	97732612	97739920	0	7	288,132,97,45,24,54,599,	0,696,1815,2340,2918,4391,7966,
#Partially deleted in new
chr7	97732083	97740465	chr7:97732083-97740465	1	+	97732612	97739920	0	6	112,132,97,24,54,592,	0,520,1639,2742,4215,7790,
#Partially deleted in new
chr7	97732083	97740438	chr7:97732083-97740438	1	+	97732612	97739920	0	6	112,132,97,45,24,565,	0,520,1639,2164,2742,7790,
#Deleted in new
chr7	97732160	97733090	chr7:97732160-97733090	0	+	97732160	97732160	8553170	2	35,487,	0,443,
#Partially deleted in new
chr7	97733953	97740063	chr7:97733953-97740063	0	+	97733953	97733953	8553170	4	339,24,54,190,	0,872,2345,5920,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr7	97851687	97972299	chr7:97851687-97972299	2	-	97851687	97851687	8553170	18	781,156,82,101,107,127,128,102,186,238,272,36,99,217,92,214,108,165,	0,1372,1617,2892,3665,5002,6590,7166,7525,12571,17220,18090,20663,57107,61325,85259,93820,120447,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr7	97851687	97972985	chr7:97851687-97972985	1	-	97851687	97851687	8553170	18	781,156,82,101,107,127,128,102,186,238,272,36,99,92,236,68,81,851,	0,1372,1617,2892,3665,5002,6590,7166,7525,12571,17220,18090,20663,61325,76394,77022,85392,120447,
#Partially deleted in new
chr7	97852117	97872542	chr7:97852117-97872542	3	-	97852258	97869156	789624	14	351,156,82,101,107,127,128,102,186,238,272,36,278,192,	0,942,1187,2462,3235,4572,6160,6736,7095,12141,16790,17660,19601,20233,
#Partially deleted in new
chr7	97852127	97872131	chr7:97852127-97872131	1	-	97852258	97869156	789624	13	341,156,82,101,107,127,128,102,186,238,272,36,413,	0,932,1177,2452,3225,4562,6150,6726,7085,12131,16780,17650,19591,
#Partially deleted in new
chr7	97852130	97872471	chr7:97852130-97872471	1	-	97852258	97869156	789624	13	338,156,82,101,107,127,128,102,186,238,272,36,121,	0,929,1174,2449,3222,4559,6147,6723,7082,12128,16777,17647,20220,
#Partially deleted in new
chr7	97852130	97872113	chr7:97852130-97872113	1	-	97852258	97864496	789624	11	338,156,82,101,107,127,128,102,186,238,73,	0,929,1174,2449,3222,4559,6147,6723,7082,12128,19910,
#Partially deleted in new
chr7	97852130	97869813	chr7:97852130-97869813	0	-	97854685	97869156	789624	12	338,156,82,175,107,127,128,102,186,238,272,36,	0,929,1174,2449,3222,4559,6147,6723,7082,12128,16777,17647,
#Partially deleted in new
chr7	97852135	97928411	chr7:97852135-97928411	0	-	97852135	97852135	8553170	12	333,156,82,101,107,127,128,102,186,238,169,330,	0,924,1169,2444,3217,4554,6142,6718,7077,12123,16772,75946,
#Partially deleted in new
chr7	97852145	97872467	chr7:97852145-97872467	1	-	97852258	97869093	789624	12	323,156,82,101,107,127,128,102,186,238,198,117,	0,914,1159,2434,3207,4544,6132,6708,7067,12113,16762,20205,
#Partially deleted in new
chr7	97852151	97872394	chr7:97852151-97872394	1	-	97852258	97864496	789624	11	317,156,82,101,107,127,128,102,186,238,44,	0,908,1153,2428,3201,4538,6126,6702,7061,12107,20199,
#Partially deleted in new
chr7	97852203	97872436	chr7:97852203-97872436	1	-	97852258	97869093	789624	13	265,156,82,101,107,127,128,102,186,238,198,36,86,	0,856,1101,2376,3149,4486,6074,6650,7009,12055,16704,17574,20147,
#Deleted in new
chr7	97852313	97854875	chr7:97852313-97854875	0	-	97852313	97852313	8553170	4	155,156,82,296,	0,746,991,2266,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	97854990	97858379	chr7:97854990-97858379	0	-	97854990	97854990	8553170	3	469,127,102,	0,1699,3287,
#Partially deleted in new
chr7	97859241	97872165	chr7:97859241-97872165	0	-	97859241	97869156	789624	5	157,238,272,36,125,	0,5017,9666,10536,12799,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	97863095	97869184	chr7:97863095-97869184	0	-	97863095	97863095	8553170	2	1401,277,	0,5812,
#Partially deleted in new
chr7	97864258	97871879	chr7:97864258-97871879	0	-	97864258	97869156	789624	4	238,272,36,199,	0,4649,5519,7422,
#Partially deleted in new
chr7	97864389	97869977	chr7:97864389-97869977	0	-	97864389	97869156	789624	3	107,272,200,	0,4518,5388,
#Partially deleted in new
chr7	97868904	97872408	chr7:97868904-97872408	0	-	97868904	97869093	789624	4	201,36,278,58,	0,873,2814,3446,
#Partially deleted in new
chr7	97869058	97872477	chr7:97869058-97872477	0	-	97869058	97869156	789624	4	121,36,278,127,	0,719,2660,3292,
#Partially deleted in new
chr7	97869071	97872158	chr7:97869071-97872158	0	-	97869071	97869156	789624	3	108,36,440,	0,706,2647,
#Deleted in new
chr7	97870166	97870289	chr7:97870166-97870289	7	+	97870166	97870166	16724991	1	123,	0,
#Deleted in new
chr7	97885867	97886074	chr7:97885867-97886074	7	+	97885867	97885867	16724991	1	207,	0,
#Deleted in new
chr7	97898346	97899115	chr7:97898346-97899115	7	-	97898346	97898346	16724991	1	769,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	97906428	97906822	chr7:97906428-97906822	7	+	97906428	97906428	16724991	1	394,	0,
#Deleted in new
chr7	97908255	97908424	chr7:97908255-97908424	7	+	97908255	97908255	16724991	1	169,	0,
#Deleted in new
chr7	97928081	97928300	chr7:97928081-97928300	7	-	97928081	97928081	16724991	1	219,	0,
#Deleted in new
chr7	97938438	97938794	chr7:97938438-97938794	7	-	97938438	97938438	16724991	1	356,	0,
#Deleted in new
chr7	97946986	97947998	chr7:97946986-97947998	7	-	97946986	97946986	16724991	1	1012,	0,
#Deleted in new
chr7	97963657	97963726	chr7:97963657-97963726	3	+	97963657	97963657	5263520	1	69,	0,
#Deleted in new
chr7	97964404	97964481	chr7:97964404-97964481	3	-	97964404	97964404	5263520	1	77,	0,
#Deleted in new
chr7	97966089	97967074	chr7:97966089-97967074	7	-	97966089	97966089	16724991	1	985,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	97966376	97970404	chr7:97966376-97970404	3	-	97966376	97966376	8553170	3	601,1223,86,	0,2628,3942,
#Partially deleted in new
chr7	97969004	97972254	chr7:97969004-97972254	7	-	97969004	97969004	16724991	6	48,76,94,58,51,120,	0,765,1129,1314,1675,3130,
#Partially deleted in new
chr7	97984683	97990196	chr7:97984683-97990196	3	-	97984957	97990104	789624	4	300,110,133,153,	0,2363,3732,5360,
#Partially deleted in new
chr7	97987046	97991169	chr7:97987046-97991169	0	-	97987046	97987046	8553170	4	110,133,64,137,	0,1369,2997,3986,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	98106884	98209633	chr7:98106884-98209633	3	+	98107177	98205492	789624	14	396,128,145,74,119,88,134,85,122,150,2959,133,243,4170,	0,30430,34512,44497,47873,52453,64656,78166,79992,83843,84729,96689,97059,98579,
#Partially deleted in new
chr7	98126564	98151455	chr7:98126564-98151455	0	+	98126564	98126564	8553170	4	193,128,145,74,	0,10750,14832,24817,
#Deleted in new
chr7	98211426	98212979	chr7:98211426-98212979	3	+	98212309	98212879	789624	2	72,724,	0,829,
#Deleted in new
chr7	98212253	98212959	chr7:98212253-98212959	1	+	98212309	98212879	789624	1	706,	0,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr7	98214623	98252251	chr7:98214623-98252251	3	-	98217389	98246146	0	26	2880,120,107,93,136,181,57,80,97,103,128,158,150,156,146,491,146,102,101,175,126,123,183,244,155,126,	0,3068,3312,7037,7762,8366,9038,10177,10382,13390,14415,16337,16600,17180,18203,18797,22152,23885,26227,26446,28843,29947,30261,31298,36770,37502,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	98215515	98233842	chr7:98215515-98233842	0	-	98215515	98215515	8553170	16	215,691,120,107,93,136,181,57,80,97,103,128,158,150,156,1016,	0,1297,2176,2420,6145,6870,7474,8146,9285,9490,12498,13523,15445,15708,16288,17311,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	98216736	98222961	chr7:98216736-98222961	0	-	98216736	98216736	8553170	5	767,120,107,93,576,	0,955,1199,4924,5649,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	98216759	98217838	chr7:98216759-98217838	0	-	98216759	98216759	8553170	2	744,147,	0,932,
#Partially deleted in new
chr7	98217742	98222974	chr7:98217742-98222974	0	-	98217742	98217742	8553170	5	69,107,93,136,98,	0,193,3918,4643,5134,
#Partially deleted in new
chr7	98217966	98223743	chr7:98217966-98223743	0	-	98217966	98217966	8553170	5	76,93,136,181,82,	0,3694,4419,5023,5695,
#Partially deleted in new
chr7	98222384	98228684	chr7:98222384-98228684	0	-	98222384	98222384	8553170	7	137,181,57,80,97,103,177,	0,605,1277,2416,2621,5629,6123,
#Partially deleted in new
chr7	98223030	98228861	chr7:98223030-98228861	0	-	98223030	98223030	8553170	6	140,57,80,97,103,88,	0,631,1770,1975,4983,5743,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	98226591	98231118	chr7:98226591-98231118	0	-	98226591	98226591	8553170	4	178,103,128,158,	0,1422,2447,4369,
#Partially deleted in new
chr7	98229043	98231626	chr7:98229043-98231626	0	-	98229043	98229043	8553170	3	123,158,403,	0,1917,2180,
#Partially deleted in new
chr7	98233426	98246123	chr7:98233426-98246123	0	-	98233426	98233426	8553170	3	485,87,202,	0,3349,12495,
#Partially deleted in new
chr7	98238503	98243574	chr7:98238503-98243574	0	-	98238503	98238503	8553170	4	107,101,175,108,	0,2347,2566,4963,
#Partially deleted in new
chr7	98243570	98252218	chr7:98243570-98252218	0	-	98243570	98243570	8553170	5	22,123,183,130,93,	0,1000,1314,7848,8555,
#Partially deleted in new
chr7	98244989	98251927	chr7:98244989-98251927	0	-	98244989	98246146	789624	4	78,244,130,138,	0,932,6429,6800,
#Partially deleted in new
chr7	98245034	98252206	chr7:98245034-98252206	0	-	98245034	98246146	789624	4	72,244,155,81,	0,887,6359,7091,
#Partially deleted in new
chr7	98245042	98252117	chr7:98245042-98252117	0	-	98245042	98246146	789624	4	64,244,130,217,	0,879,6376,6858,
#Deleted in new
chr7	98250913	98252175	chr7:98250913-98252175	0	-	98250913	98250913	8553170	2	635,50,	0,1212,
#Partially deleted in new
chr7	98252378	98291524	chr7:98252378-98291524	0	+	98252378	98252378	8553170	3	150,103,414,	0,29972,38732,
#Partially deleted in new
chr7	98281666	98292963	chr7:98281666-98292963	1	+	98281795	98292690	789624	3	271,103,325,	0,684,10972,
#Partially deleted in new
chr7	98281674	98291524	chr7:98281674-98291524	3	+	98281795	98291243	789624	3	263,103,414,	0,676,9436,
#Deleted in new
chr7	98281821	98282706	chr7:98281821-98282706	0	+	98281821	98281821	8553170	2	116,356,	0,529,
#Partially deleted in new
chr7	98281835	98291545	chr7:98281835-98291545	0	+	98281835	98281835	8553170	4	102,103,179,435,	0,515,996,9275,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	98282382	98307449	chr7:98282382-98307449	0	+	98282382	98306555	789624	3	71,183,313,	0,24100,24754,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	98291650	98401068	chr7:98291650-98401068	3	-	98293520	98400852	0	14	1946,38,181,78,208,148,168,153,138,72,62,87,76,267,	0,2423,12545,14788,16038,18794,20446,23809,25568,28407,28586,63391,70706,109151,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	98304195	98306957	chr7:98304195-98306957	0	-	98304195	98304195	8553170	2	170,519,	0,2243,
#Duplicated in new
chr7	98306521	98310441	chr7:98306521-98310441	0	+	98306521	98306521	8553170	2	144,2927,	0,993,
#Partially deleted in new
chr7	98308303	98401068	chr7:98308303-98401068	0	-	98308303	98308303	8553170	10	79,148,168,153,138,72,62,87,76,267,	0,2141,3793,7156,8915,11754,11933,46738,54053,92498,
#Partially deleted in new
chr7	98317236	98355426	chr7:98317236-98355426	0	-	98317236	98317236	8553170	4	120,72,62,385,	0,2821,3000,37805,
#Deleted in new
chr7	98322852	98323430	chr7:98322852-98323430	3	+	98322852	98322852	8553170	1	578,	0,
#Partially deleted in new
chr7	98355040	98400337	chr7:98355040-98400337	0	-	98355040	98355040	8553170	3	88,76,357,	0,7316,44940,
#Partially deleted in new
chr7	98385800	98386584	chr7:98385800-98386584	7	-	98385800	98385800	16724991	1	784,	0,
#Partially deleted in new
chr7	98454118	98454617	chr7:98454118-98454617	7	-	98454118	98454118	16724991	1	499,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	98478550	98479225	chr7:98478550-98479225	7	-	98478550	98478550	16724991	2	212,136,	0,539,
#Partially deleted in new
chr7	98617296	98629868	chr7:98617296-98629868	3	+	98617461	98628629	789624	5	591,217,245,180,1467,	0,2346,7625,9868,11105,
#Partially deleted in new
chr7	98619666	98627253	chr7:98619666-98627253	0	+	98619666	98619666	8553170	3	509,245,89,	0,5255,7498,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	98846487	98870036	chr7:98846487-98870036	3	-	98848055	98869861	789624	8	1721,113,203,85,167,160,306,260,	0,2095,4933,8752,9529,13691,16607,23289,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	98846487	98869866	chr7:98846487-98869866	1	-	98848055	98869861	789624	8	1757,113,203,85,167,160,306,90,	0,2095,4933,8752,9529,13691,16607,23289,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	98846500	98866946	chr7:98846500-98866946	1	-	98848055	98863233	789624	8	1708,113,203,85,167,160,306,1149,	0,2082,4920,8739,9516,13678,16594,19297,
#Partially deleted in new
chr7	98846548	98847728	chr7:98846548-98847728	0	-	98846548	98846548	8553170	2	305,562,	0,618,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	98846856	98869957	chr7:98846856-98869957	1	-	98848055	98869861	789624	7	1352,113,203,85,167,160,181,	0,1726,4564,8383,9160,13322,22920,
#Partially deleted in new
chr7	98851524	98870014	chr7:98851524-98870014	0	-	98851524	98851524	8553170	4	99,85,167,238,	0,3715,4492,18252,
#Partially deleted in new
chr7	98860187	98869294	chr7:98860187-98869294	0	-	98860187	98860187	8553170	3	151,306,90,	0,2907,9017,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	98863094	98870771	chr7:98863094-98870771	0	-	98863094	98863233	789624	2	306,373,	0,7304,
#Partially deleted in new
chr7	98877932	98890399	chr7:98877932-98890399	0	+	98881150	98890399	789624	5	64,210,161,50,65,	0,150,3157,4042,12402,
#Partially deleted in new
chr7	98878489	99013243	chr7:98878489-99013243	3	+	98881150	99012355	789624	71	148,161,50,111,105,84,57,126,78,89,97,139,79,235,364,98,195,192,166,257,201,152,200,218,198,261,162,97,122,171,69,120,120,165,182,199,129,267,207,159,135,111,147,214,126,147,200,122,214,180,147,120,288,138,113,136,192,196,266,101,202,165,91,146,262,226,218,185,204,195,1173,	0,2600,3485,11845,13934,15308,17274,19251,20932,21189,22134,24889,27687,30238,31566,32020,32587,33532,37233,38933,43263,46622,48677,51499,52143,52915,54751,57089,58666,59160,64459,69731,70076,70927,71170,71574,72386,74677,76608,77656,77909,79491,80854,82771,83812,86139,87206,88551,88995,91622,93309,97659,97993,98449,99721,100279,103279,104774,105603,106454,110275,111965,113647,115102,116097,125700,126641,129887,132562,132851,133581,
#Partially deleted in new
chr7	98878489	99013243	chr7:98878489-99013243	1	+	98881150	99012355	789624	72	148,161,50,111,105,84,57,126,78,89,97,139,79,235,364,98,195,192,166,257,201,152,200,218,198,261,162,97,122,171,69,54,120,120,165,182,199,129,267,207,159,135,111,147,214,126,147,200,122,214,180,147,120,288,138,113,136,192,229,266,101,202,165,91,146,262,226,218,185,204,195,1173,	0,2600,3485,11845,13934,15308,17274,19251,20932,21189,22134,24889,27687,30238,31566,32020,32587,33532,37233,38933,43263,46622,48677,51499,52143,52915,54751,57089,58666,59160,64459,67257,69731,70076,70927,71170,71574,72386,74677,76608,77656,77909,79491,80854,82771,83812,86139,87206,88551,88995,91622,93309,97659,97993,98449,99721,100279,103279,104774,105603,106454,110275,111965,113647,115102,116097,125700,126641,129887,132562,132851,133581,
#Partially deleted in new
chr7	98878489	99013243	chr7:98878489-99013243	1	+	98881150	99012355	789624	71	148,161,50,111,105,84,57,126,78,89,97,139,79,235,364,95,195,192,166,257,201,152,200,218,198,261,162,97,122,171,69,120,120,165,182,199,129,267,207,159,135,111,147,214,126,147,203,122,214,180,147,120,288,138,113,136,192,196,266,101,202,165,91,200,262,226,218,185,204,195,1173,	0,2600,3485,11845,13934,15308,17274,19251,20932,21189,22134,24889,27687,30238,31566,32023,32587,33532,37233,38933,43263,46622,48677,51499,52143,52915,54751,57089,58666,59160,64459,69731,70076,70927,71170,71574,72386,74677,76608,77656,77909,79491,80854,82771,83812,86139,87203,88551,88995,91622,93309,97659,97993,98449,99721,100279,103279,104774,105603,106454,110275,111965,113647,115048,116097,125700,126641,129887,132562,132851,133581,
#Partially deleted in new
chr7	98881089	99013239	chr7:98881089-99013239	1	+	98881150	99012355	789624	70	161,50,111,105,84,57,126,78,89,97,139,79,235,364,95,195,192,166,257,201,152,200,218,198,261,162,97,122,171,69,120,120,165,182,199,129,267,207,159,135,111,147,214,126,147,203,122,214,180,147,120,288,138,113,136,192,196,266,101,202,165,91,200,262,226,218,185,204,195,1169,	0,885,9245,11334,12708,14674,16651,18332,18589,19534,22289,25087,27638,28966,29423,29987,30932,34633,36333,40663,44022,46077,48899,49543,50315,52151,54489,56066,56560,61859,67131,67476,68327,68570,68974,69786,72077,74008,75056,75309,76891,78254,80171,81212,83539,84603,85951,86395,89022,90709,95059,95393,95849,97121,97679,100679,102174,103003,103854,107675,109365,111047,112448,113497,123100,124041,127287,129962,130251,130981,
#Deleted in new
chr7	98881649	98881729	chr7:98881649-98881729	3	+	98881649	98881649	5263520	1	80,	0,
#Partially deleted in new
chr7	98900679	99013243	chr7:98900679-99013243	0	+	98900679	99012355	789624	63	41,139,79,235,364,98,195,192,166,257,201,152,200,218,198,261,162,97,122,171,69,54,21,120,120,165,182,199,129,267,207,159,135,111,147,214,126,147,200,122,214,180,147,120,288,138,113,136,192,196,266,101,202,165,91,200,262,226,218,185,204,195,1173,	0,2699,5497,8048,9376,9830,10397,11342,15043,16743,21073,24432,26487,29309,29953,30725,32561,34899,36476,36970,42269,45067,45250,47541,47886,48737,48980,49384,50196,52487,54418,55466,55719,57301,58664,60581,61622,63949,65016,66361,66805,69432,71119,75469,75803,76259,77531,78089,81089,82584,83413,84264,88085,89775,91457,92858,93907,103510,104451,107697,110372,110661,111391,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr7	98970186	99036477	chr7:98970186-99036477	0	+	98970186	99012355	789624	27	105,147,120,288,138,113,136,192,196,266,101,202,165,91,200,262,226,218,185,204,195,2885,163,116,121,146,1061,	0,1612,5962,6296,6752,8024,8582,11582,13077,13906,14757,18578,20268,21950,23351,24400,34003,34944,38190,40865,41154,41884,60408,60698,61158,62707,65230,
#Partially deleted in new
chr7	98975959	98978280	chr7:98975959-98978280	0	+	98975959	98975959	8553170	4	309,288,138,70,	0,523,979,2251,
#Deleted in new
chr7	98998537	98999930	chr7:98998537-98999930	7	-	98998537	98998537	16724991	1	1393,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	99014617	99050831	chr7:99014617-99050831	0	+	99014617	99014617	8553170	5	338,116,121,146,3177,	0,16267,16727,18276,33037,
#Partially deleted in new
chr7	99027437	99144019	chr7:99027437-99144019	3	-	99030583	99143780	0	18	3246,85,202,121,138,179,115,104,199,147,85,242,76,66,134,109,39,294,	0,5599,8077,9629,10950,12940,14680,18260,20246,22125,23919,24767,27352,29767,29980,33161,34361,116288,
#Partially deleted in new
chr7	99027440	99144100	chr7:99027440-99144100	1	-	99030583	99143780	0	19	3243,85,202,121,138,179,115,104,199,147,78,85,242,76,66,134,109,39,375,	0,5596,8074,9626,10947,12937,14677,18257,20243,22122,23474,23916,24764,27349,29764,29977,33158,34358,116285,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	99030594	99048240	chr7:99030594-99048240	0	+	99030594	99030594	8553170	6	170,116,121,146,251,586,	0,290,750,2299,14947,17060,
#Deleted in new
chr7	99032893	99032940	chr7:99032893-99032940	7	+	99032893	99032893	16724991	1	47,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	99052211	99081427	chr7:99052211-99081427	0	-	99052211	99052211	8553170	7	235,76,66,134,109,39,353,	0,2578,4993,5206,8387,9587,28863,
#Partially deleted in new
chr7	99057204	99144019	chr7:99057204-99144019	0	-	99057204	99057204	8553170	7	66,134,109,39,125,58,294,	0,213,3394,4594,63438,63941,86521,
#Partially deleted in new
chr7	99173573	99207506	chr7:99173573-99207506	3	-	99173707	99207466	789624	10	221,147,183,234,264,83,269,83,135,106,	0,4346,8309,11355,14726,19445,21496,22510,29532,33827,
#Partially deleted in new
chr7	99238828	99306809	chr7:99238828-99306809	7	+	99238828	99238828	16724991	42	210,144,157,28,97,93,64,99,104,139,269,171,180,127,59,86,118,121,137,82,174,228,105,87,146,91,57,87,246,118,128,197,133,217,137,104,193,204,126,171,201,201,	0,4449,8765,10162,11150,12265,13984,14898,16753,18473,19293,21335,22625,24505,25421,26275,26741,28025,32128,34513,38710,40681,42047,44736,45044,46016,46553,47609,49063,50458,52494,53483,55189,57872,58831,59063,60637,62772,64236,65757,67007,67780,
#Partially deleted in new
chr7	99238910	99261636	chr7:99238910-99261636	4	+	99238910	99238910	16724991	12	128,144,157,28,97,93,99,104,139,269,171,183,	0,4367,8683,10080,11068,12183,14816,16671,18391,19211,21253,22543,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	99252451	99325823	chr7:99252451-99325823	1	-	99252451	99252451	8553170	4	1794,100,208,310,	0,38425,66785,73062,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	99260569	99325586	chr7:99260569-99325586	1	-	99260569	99260569	8553170	4	1356,100,208,73,	0,30307,58667,64944,
#Partially deleted in new
chr7	99264266	99271049	chr7:99264266-99271049	4	+	99264266	99264266	16724991	5	42,86,118,121,93,	0,837,1303,2587,6690,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	99287806	99325750	chr7:99287806-99325750	0	-	99287806	99287806	8553170	5	253,100,203,208,237,	0,3070,11657,31430,37707,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	99287806	99325826	chr7:99287806-99325826	3	-	99287806	99287806	8553170	5	253,100,181,208,313,	0,3070,17782,31430,37707,
#Partially deleted in new
chr7	99297911	99311130	chr7:99297911-99311130	5	+	99297911	99297911	16724991	8	84,193,204,126,171,201,228,392,	0,1554,3689,5153,6674,7924,8697,12827,
#Partially deleted in new
chr7	99299416	99301774	chr7:99299416-99301774	4	+	99299416	99299416	16724991	2	242,174,	0,2184,
#Partially deleted in new
chr7	99325878	99394653	chr7:99325878-99394653	3	+	99333353	99394102	789624	17	126,93,105,223,108,213,76,194,77,105,223,108,207,76,206,87,203,	0,7446,12302,18414,22973,28030,32461,33666,59823,60806,62160,64026,65014,65299,66792,68154,68572,
#Partially deleted in new
chr7	99325897	99388164	chr7:99325897-99388164	0	+	99333353	99338246	789624	14	107,93,32,105,152,223,108,213,76,194,91,77,105,126,	0,7427,9555,12283,13960,18395,22954,28011,32442,33647,37645,59804,60787,62141,
#Partially deleted in new
chr7	99325909	99366257	chr7:99325909-99366257	3	+	99333353	99365929	789624	10	95,93,105,223,108,213,76,194,91,367,	0,7415,12271,18383,22942,27999,32430,33635,37633,39981,
#Partially deleted in new
chr7	99325926	99366226	chr7:99325926-99366226	0	+	99333353	99359596	789624	10	78,93,105,223,108,213,64,205,91,336,	0,7398,12254,18366,22925,27982,32413,33607,37616,39964,
#Partially deleted in new
chr7	99353934	99360242	chr7:99353934-99360242	0	+	99353934	99353934	8553170	4	187,76,194,284,	0,4405,5610,6024,
#Partially deleted in new
chr7	99363464	99366262	chr7:99363464-99366262	0	+	99363464	99363464	8553170	2	169,372,	0,2426,
#Partially deleted in new
chr7	99374248	99394801	chr7:99374248-99394801	1	+	99385714	99394102	789624	10	330,77,105,223,108,207,76,206,87,351,	0,11453,12436,13790,15656,16644,16929,18422,19784,20202,
#Partially deleted in new
chr7	99374258	99388175	chr7:99374258-99388175	0	+	99385714	99388175	789624	4	253,77,105,137,	0,11443,12426,13780,
#Partially deleted in new
chr7	99374674	99394814	chr7:99374674-99394814	3	+	99385714	99394489	789624	10	107,77,105,223,108,207,76,206,91,364,	0,11027,12010,13364,15230,16218,16503,17996,19354,19776,
#Partially deleted in new
chr7	99374706	99391100	chr7:99374706-99391100	0	+	99374706	99374706	8553170	6	75,77,105,223,108,197,	0,10995,11978,13332,15198,16197,
#Partially deleted in new
chr7	99374729	99390029	chr7:99374729-99390029	0	+	99374729	99374729	8553170	5	52,77,105,223,125,	0,10972,11955,13309,15175,
#Partially deleted in new
chr7	99374729	99394816	chr7:99374729-99394816	1	+	99385714	99394489	789624	10	52,77,105,223,108,207,76,206,91,366,	0,10972,11955,13309,15175,16163,16448,17941,19299,19721,
#Partially deleted in new
chr7	99385699	99391006	chr7:99385699-99391006	0	+	99385714	99386527	789624	6	79,98,105,223,108,114,	0,793,985,2339,4205,5193,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	99385699	99388956	chr7:99385699-99388956	0	+	99385699	99385699	8553170	4	79,105,223,302,	0,985,2339,2955,
#Partially deleted in new
chr7	99386368	99388243	chr7:99386368-99388243	0	+	99386368	99386368	8553170	3	222,105,205,	0,316,1670,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	99389093	99389983	chr7:99389093-99389983	0	+	99389093	99389093	8553170	1	890,	0,
#Partially deleted in new
chr7	99390871	99394794	chr7:99390871-99394794	0	+	99390871	99390871	8553170	5	228,76,206,91,344,	0,306,1799,3157,3579,
#Partially deleted in new
chr7	99391177	99394797	chr7:99391177-99394797	0	+	99391177	99391177	8553170	3	76,206,769,	0,1493,2851,
#Partially deleted in new
chr7	99392047	99397960	chr7:99392047-99397960	0	-	99392047	99392047	8553170	3	103,100,99,	0,652,5814,
#Deleted in new
chr7	99394041	99394801	chr7:99394041-99394801	0	+	99394041	99394041	8553170	2	78,459,	0,301,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	99394962	99408829	chr7:99394962-99408829	3	-	99396681	99408548	789624	6	1778,152,122,108,92,294,	0,2899,5340,8435,9899,13573,
#Partially deleted in new
chr7	99396522	99408590	chr7:99396522-99408590	0	-	99403510	99408548	789624	6	218,152,122,128,92,55,	0,1339,3780,6875,8339,12013,
#Deleted in new
chr7	99403316	99404942	chr7:99403316-99404942	0	-	99403316	99403316	8553170	2	189,85,	0,1541,
#Partially deleted in new
chr7	99403510	99408548	chr7:99403510-99408548	1	-	99403510	99408548	789624	3	15,92,13,	0,1351,5025,
#Partially deleted in new
chr7	99408640	99419616	chr7:99408640-99419616	3	+	99411092	99419441	0	6	364,136,123,123,167,226,	0,1393,2423,7497,8788,10750,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	99408671	99416200	chr7:99408671-99416200	0	+	99411092	99411769	789624	5	333,136,123,234,63,	0,1362,2392,3078,7466,
#Partially deleted in new
chr7	99408968	99417598	chr7:99408968-99417598	0	+	99408968	99408968	8553170	5	36,133,123,123,170,	0,1068,2095,7169,8460,
#Partially deleted in new
chr7	99408977	99419608	chr7:99408977-99419608	1	+	99411092	99419441	0	6	268,136,123,123,167,218,	0,1056,2086,7160,8451,10413,
#Partially deleted in new
chr7	99409084	99411246	chr7:99409084-99411246	0	+	99409084	99409084	8553170	3	161,136,183,	0,949,1979,
#Partially deleted in new
chr7	99410113	99416299	chr7:99410113-99416299	0	+	99410113	99410113	8553170	3	56,123,162,	0,950,6024,
#Partially deleted in new
chr7	99411063	99419612	chr7:99411063-99419612	1	+	99411092	99419441	789624	3	123,167,222,	0,6365,8327,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	99416133	99418121	chr7:99416133-99418121	0	+	99416133	99416133	8553170	2	127,693,	0,1295,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	99416738	99438916	chr7:99416738-99438916	3	-	99419966	99435242	789624	8	3411,183,822,102,219,141,479,225,	0,7036,8056,12364,12849,16539,18051,21953,
#Partially deleted in new
chr7	99419748	99466164	chr7:99419748-99466164	3	-	99419966	99466141	789624	9	401,183,822,102,219,141,479,108,36,	0,4026,5046,9354,9839,13529,15041,40337,46380,
#Partially deleted in new
chr7	99433379	99466163	chr7:99433379-99466163	0	-	99433379	99435242	789624	3	39,479,53,	0,1410,32731,
#Partially deleted in new
chr7	99434809	99438647	chr7:99434809-99438647	0	-	99434809	99435242	789624	2	459,97,	0,3741,
#Partially deleted in new
chr7	99434924	99438755	chr7:99434924-99438755	0	-	99434924	99435242	789624	2	344,189,	0,3642,
#Partially deleted in new
chr7	99435030	99466197	chr7:99435030-99466197	0	-	99435030	99435030	8553170	3	238,237,69,	0,12921,31098,
#Partially deleted in new
chr7	99435177	99466162	chr7:99435177-99466162	0	-	99441443	99466141	789624	4	91,98,108,34,	0,6212,24908,30951,
#Partially deleted in new
chr7	99438921	99457342	chr7:99438921-99457342	1	+	99439082	99456500	0	8	264,51,153,96,94,73,96,911,	0,5867,9199,11354,11780,13446,15119,17510,
#Partially deleted in new
chr7	99438945	99457371	chr7:99438945-99457371	1	+	99439082	99456500	789624	7	240,51,153,94,73,93,940,	0,5843,9175,11756,13422,15098,17486,
#Partially deleted in new
chr7	99439072	99457371	chr7:99439072-99457371	3	+	99439082	99456500	0	8	113,51,153,96,94,73,171,940,	0,5716,9048,11203,11629,13295,14893,17359,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	99439112	99450795	chr7:99439112-99450795	0	+	99439178	99447849	789624	6	73,51,268,153,96,94,	0,5676,8660,9008,11163,11589,
#Partially deleted in new
chr7	99439375	99456589	chr7:99439375-99456589	1	+	99448125	99456500	789624	8	221,51,153,96,94,73,96,158,	0,5413,8745,10900,11326,12992,14665,17056,
#Partially deleted in new
chr7	99439424	99450795	chr7:99439424-99450795	0	+	99448125	99450795	789624	6	172,179,51,153,96,94,	0,3572,5364,8696,10851,11277,
#Partially deleted in new
chr7	99439449	99451079	chr7:99439449-99451079	0	+	99439449	99439449	8553170	5	147,51,153,96,378,	0,5339,8671,10826,11252,
#Deleted in new
chr7	99442889	99443496	chr7:99442889-99443496	7	-	99442889	99442889	16724991	1	607,	0,
#Partially deleted in new
chr7	99444784	99456645	chr7:99444784-99456645	0	+	99444784	99456645	789624	6	55,153,96,73,96,214,	0,3336,5491,7583,9256,11647,
#Partially deleted in new
chr7	99444809	99454023	chr7:99444809-99454023	0	+	99444809	99444809	8553170	7	30,153,96,94,73,65,58,	0,3311,5466,5892,7558,8794,9156,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	99448474	99466165	chr7:99448474-99466165	0	-	99448474	99448474	8553170	2	719,55,	0,17636,
#Partially deleted in new
chr7	99448955	99466165	chr7:99448955-99466165	0	-	99458326	99466141	789624	4	238,158,108,37,	0,9242,11130,17173,
#Partially deleted in new
chr7	99450324	99456578	chr7:99450324-99456578	0	+	99450324	99456578	789624	5	47,94,73,171,193,	0,377,2043,3641,6061,
#Partially deleted in new
chr7	99450463	99452609	chr7:99450463-99452609	0	+	99450463	99450463	8553170	2	332,242,	0,1904,
#Partially deleted in new
chr7	99450765	99453264	chr7:99450765-99453264	0	+	99450765	99450765	8553170	2	30,897,	0,1602,
#Partially deleted in new
chr7	99453686	99456670	chr7:99453686-99456670	0	+	99453686	99453686	8553170	2	450,239,	0,2745,
#Partially deleted in new
chr7	99458189	99466167	chr7:99458189-99466167	1	-	99458326	99466141	789624	4	166,117,138,39,	0,957,1896,7939,
#Partially deleted in new
chr7	99458194	99466331	chr7:99458194-99466331	1	-	99458326	99466141	789624	4	161,117,108,221,	0,952,1891,7916,
#Partially deleted in new
chr7	99458194	99466164	chr7:99458194-99466164	1	-	99458326	99466141	789624	3	161,108,54,	0,1891,7916,
#Partially deleted in new
chr7	99458194	99460465	chr7:99458194-99460465	0	-	99458194	99458194	8553170	3	161,117,380,	0,952,1891,
#Partially deleted in new
chr7	99458196	99466167	chr7:99458196-99466167	1	-	99458326	99466141	789624	3	159,108,39,	0,1889,7932,
#Partially deleted in new
chr7	99458308	99466161	chr7:99458308-99466161	3	-	99458326	99466141	789624	4	47,117,108,33,	0,838,1777,7820,
#Partially deleted in new
chr7	99458939	99460499	chr7:99458939-99460499	0	-	99458939	99458939	8553170	2	324,414,	0,1146,
#Partially deleted in new
chr7	99459236	99466167	chr7:99459236-99466167	0	-	99459236	99466141	789624	2	27,57,	0,6874,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	99459654	99466186	chr7:99459654-99466186	0	-	99459654	99459654	8553170	2	539,58,	0,6474,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	99459663	99466164	chr7:99459663-99466164	0	-	99459663	99459663	8553170	2	530,54,	0,6447,
#Partially deleted in new
chr7	99472840	99487594	chr7:99472840-99487594	3	+	99476456	99487488	789624	5	216,78,127,114,1119,	0,3562,6820,11189,13635,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	99472889	99486800	chr7:99472889-99486800	1	+	99478353	99485320	789624	7	167,78,83,127,114,161,325,	0,3513,5384,6771,11140,12318,13586,
#Partially deleted in new
chr7	99472889	99484146	chr7:99472889-99484146	0	+	99472889	99472889	8553170	3	167,127,117,	0,6771,11140,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	99472889	99482326	chr7:99472889-99482326	1	+	99478353	99479828	789624	4	167,78,83,2666,	0,3513,5384,6771,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	99472891	99481301	chr7:99472891-99481301	0	+	99472891	99472891	8553170	3	165,78,1641,	0,3511,6769,
#Partially deleted in new
chr7	99472892	99503650	chr7:99472892-99503650	1	+	99478353	99503587	789624	5	164,78,83,127,104,	0,3510,5381,6768,30654,
#Partially deleted in new
chr7	99472910	99486654	chr7:99472910-99486654	0	+	99478353	99483776	789624	7	146,78,83,127,115,114,179,	0,3492,5363,6750,10828,11119,13565,
#Partially deleted in new
chr7	99472911	99482322	chr7:99472911-99482322	1	+	99476456	99482200	789624	4	145,78,127,160,	0,3491,6749,9251,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	99472934	99482326	chr7:99472934-99482326	0	+	99472934	99472934	8553170	3	122,78,4053,	0,3468,5339,
#Partially deleted in new
chr7	99476239	99479903	chr7:99476239-99479903	0	+	99476239	99476239	8553170	2	241,243,	0,3421,
#Partially deleted in new
chr7	99483654	99487004	chr7:99483654-99487004	0	+	99483654	99483654	8553170	2	489,529,	0,2821,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	99484029	99501019	chr7:99484029-99501019	0	+	99484029	99484029	8553170	2	114,297,	0,16693,
#Partially deleted in new
chr7	99486518	99498798	chr7:99486518-99498798	0	-	99486518	99486518	8553170	2	445,83,	0,12197,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	99493239	99500297	chr7:99493239-99500297	3	-	99493528	99500093	789624	3	1392,127,660,	0,5476,6398,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	99493241	99500264	chr7:99493241-99500264	1	-	99494598	99500093	789624	2	1390,627,	0,6396,
#Partially deleted in new
chr7	99494578	99500324	chr7:99494578-99500324	0	-	99494578	99494578	8553170	4	53,127,234,128,	0,4137,5059,5618,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	99497861	99500275	chr7:99497861-99500275	0	-	99497861	99497861	8553170	2	981,638,	0,1776,
#Partially deleted in new
chr7	99498483	99500297	chr7:99498483-99500297	0	-	99498483	99498483	8553170	2	359,660,	0,1154,
#Partially deleted in new
chr7	99498584	99499704	chr7:99498584-99499704	0	-	99498584	99498584	8553170	2	258,67,	0,1053,
#Partially deleted in new
chr7	99504650	99533784	chr7:99504650-99533784	3	+	99506044	99532249	0	7	83,454,139,83,136,606,2677,	0,1354,7802,15176,15518,21162,26457,
#Partially deleted in new
chr7	99504674	99532679	chr7:99504674-99532679	1	+	99506044	99532249	0	7	59,516,139,83,136,606,1572,	0,1268,7778,15152,15494,21138,26433,
#Partially deleted in new
chr7	99504949	99533822	chr7:99504949-99533822	1	+	99506044	99532249	0	7	211,454,139,83,136,606,2715,	0,1055,7503,14877,15219,20863,26158,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	99505253	99534700	chr7:99505253-99534700	0	+	99506044	99525845	789624	5	1205,139,83,606,3593,	0,7199,14573,20559,25854,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	99546307	99552134	chr7:99546307-99552134	3	-	99546685	99548407	789624	2	2199,281,	0,5546,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	99546800	99558536	chr7:99546800-99558536	0	-	99546800	99548407	789624	2	1706,237,	0,11499,
#Partially deleted in new
chr7	99558405	99564705	chr7:99558405-99564705	1	+	99560559	99564059	789624	5	382,163,86,127,843,	0,2127,3482,3962,5457,
#Partially deleted in new
chr7	99558421	99564703	chr7:99558421-99564703	1	+	99560559	99564059	789624	3	366,163,841,	0,2111,5441,
#Partially deleted in new
chr7	99558421	99564705	chr7:99558421-99564705	0	+	99558421	99558421	8553170	4	366,163,607,843,	0,2111,3466,5441,
#Partially deleted in new
chr7	99558421	99571777	chr7:99558421-99571777	1	+	99560559	99571777	789624	4	366,163,86,90,	0,2111,3466,13266,
#Partially deleted in new
chr7	99558543	99560959	chr7:99558543-99560959	0	+	99558543	99558543	8553170	2	244,427,	0,1989,
#Partially deleted in new
chr7	99558566	99564023	chr7:99558566-99564023	0	+	99560559	99564023	789624	3	221,163,161,	0,1966,5296,
#Partially deleted in new
chr7	99558570	99564686	chr7:99558570-99564686	0	+	99560559	99563210	789624	6	217,163,86,127,79,824,	0,1962,3317,3797,4617,5292,
#Partially deleted in new
chr7	99558577	99574406	chr7:99558577-99574406	1	+	99560559	99573584	789624	3	210,163,2162,	0,1955,13667,
#Partially deleted in new
chr7	99558591	99571787	chr7:99558591-99571787	1	+	99560559	99571777	789624	4	196,189,86,100,	0,1915,3296,13096,
#Partially deleted in new
chr7	99558594	99572318	chr7:99558594-99572318	0	+	99560559	99571264	789624	5	193,163,120,105,74,	0,1938,12665,13093,13650,
#Partially deleted in new
chr7	99558668	99564705	chr7:99558668-99564705	0	+	99560559	99563210	789624	6	119,163,86,151,79,843,	0,1864,3219,3675,4519,5194,
#Partially deleted in new
chr7	99558668	99571717	chr7:99558668-99571717	1	+	99560559	99571709	789624	5	119,163,86,146,30,	0,1864,3219,3680,13019,
#Partially deleted in new
chr7	99558669	99571571	chr7:99558669-99571571	0	+	99558669	99558669	8553170	3	118,163,312,	0,1863,12590,
#Partially deleted in new
chr7	99558694	99607810	chr7:99558694-99607810	3	+	99560559	99604552	789624	6	93,163,78,211,147,138,	0,1838,41513,45691,48053,48978,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	99558712	99576439	chr7:99558712-99576439	1	+	99560559	99571777	789624	5	75,163,86,105,4195,	0,1820,3175,12975,13532,
#Partially deleted in new
chr7	99558717	99573721	chr7:99558717-99573721	1	+	99560559	99573584	789624	4	70,163,105,1477,	0,1815,12970,13527,
#Partially deleted in new
chr7	99558725	99564346	chr7:99558725-99564346	0	+	99560559	99563210	789624	4	62,163,73,484,	0,1807,4468,5137,
#Partially deleted in new
chr7	99558767	99562398	chr7:99558767-99562398	0	+	99558767	99558767	8553170	3	250,163,511,	0,1765,3120,
#Partially deleted in new
chr7	99558798	99572550	chr7:99558798-99572550	0	+	99560559	99572550	789624	4	219,163,105,306,	0,1734,12889,13446,
#Partially deleted in new
chr7	99558804	99572332	chr7:99558804-99572332	0	+	99560559	99572332	789624	4	217,163,105,88,	0,1728,12883,13440,
#Partially deleted in new
chr7	99558804	99572340	chr7:99558804-99572340	0	+	99560559	99572340	789624	4	203,163,105,96,	0,1728,12883,13440,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	99558824	99576449	chr7:99558824-99576449	1	+	99560559	99573584	789624	4	193,163,105,4205,	0,1708,12863,13420,
#Partially deleted in new
chr7	99558825	99564705	chr7:99558825-99564705	1	+	99560559	99564059	789624	3	192,163,843,	0,1707,5037,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	99558861	99576453	chr7:99558861-99576453	3	+	99560559	99573584	789624	3	156,163,4209,	0,1671,13383,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	99570198	99575536	chr7:99570198-99575536	0	+	99570198	99570198	8553170	2	1594,3292,	0,2046,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	99571347	99576453	chr7:99571347-99576453	0	+	99571347	99571347	8553170	3	32,105,4209,	0,340,897,
#Partially deleted in new
chr7	99598065	99610813	chr7:99598065-99610813	3	+	99604388	99610565	789624	6	316,81,211,147,138,421,	0,2139,6320,8682,9607,12327,
#Partially deleted in new
chr7	99598278	99610762	chr7:99598278-99610762	1	+	99604388	99610565	789624	6	94,81,211,147,138,370,	0,1926,6107,8469,9394,12114,
#Partially deleted in new
chr7	99598284	99605559	chr7:99598284-99605559	0	+	99598284	99598284	8553170	4	97,78,211,96,	0,1923,6101,7179,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	99616945	99632399	chr7:99616945-99632399	0	+	99616945	99616945	8553170	7	71,127,85,2014,92,124,3209,	0,1579,2102,2615,5603,7111,12245,
#Partially deleted in new
chr7	99616947	99630904	chr7:99616947-99630904	0	+	99619606	99621470	789624	8	42,127,85,437,202,92,124,1714,	0,1577,2100,2613,4425,5601,7109,12243,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	99616947	99632407	chr7:99616947-99632407	3	+	99619606	99630020	789624	8	69,127,85,433,202,92,124,3217,	0,1577,2100,2613,4425,5601,7109,12243,
#Partially deleted in new
chr7	99616952	99624484	chr7:99616952-99624484	0	+	99616952	99616952	8553170	3	64,92,428,	0,5596,7104,
#Partially deleted in new
chr7	99616952	99629468	chr7:99616952-99629468	0	+	99616952	99616952	8553170	4	64,92,124,278,	0,5596,7104,12238,
#Partially deleted in new
chr7	99616965	99619816	chr7:99616965-99619816	0	+	99619606	99619816	789624	5	51,75,127,85,256,	0,1169,1559,2082,2595,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	99619549	99632407	chr7:99619549-99632407	1	+	99619606	99630020	789624	5	444,202,92,124,3217,	0,1823,2999,4507,9641,
#Partially deleted in new
chr7	99619624	99630271	chr7:99619624-99630271	1	+	99619627	99630020	789624	3	369,202,1081,	0,1748,9566,
#Partially deleted in new
chr7	99619664	99630908	chr7:99619664-99630908	0	+	99619664	99619664	8553170	3	329,64,251,	0,1708,10993,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	99621060	99632371	chr7:99621060-99632371	0	+	99621060	99621060	8553170	3	1580,124,3181,	0,2996,8130,
#Deleted in new
chr7	99638241	99638767	chr7:99638241-99638767	7	-	99638241	99638241	16724991	1	526,	0,
#Partially deleted in new
chr7	99648193	99679996	chr7:99648193-99679996	3	-	99648304	99679896	0	13	207,160,227,161,67,128,149,89,114,100,53,94,171,	0,1879,4359,12305,14622,15774,16972,18407,18758,24386,26339,27921,31632,
#Partially deleted in new
chr7	99648197	99679988	chr7:99648197-99679988	0	-	99648197	99648197	8553170	14	203,160,227,161,67,128,149,89,114,100,132,53,462,163,	0,1875,4355,12301,14618,15770,16968,18403,18754,24382,24586,26335,27917,31628,
#Partially deleted in new
chr7	99648197	99676576	chr7:99648197-99676576	0	-	99648197	99648197	8553170	12	203,160,227,161,1280,149,89,114,119,132,53,462,	0,1875,4355,12301,14618,16968,18403,18754,24382,24586,26335,27917,
#Partially deleted in new
chr7	99648197	99679996	chr7:99648197-99679996	0	-	99671773	99679896	0	14	203,160,227,161,67,128,149,89,114,108,100,53,94,171,	0,1875,4355,12301,14618,15770,16968,18403,18754,23573,24382,26335,27917,31628,
#Partially deleted in new
chr7	99648199	99679998	chr7:99648199-99679998	1	-	99676527	99679896	789624	13	201,160,227,161,1280,149,89,114,119,132,53,462,173,	0,1873,4353,12299,14616,16966,18401,18752,24380,24584,26333,27915,31626,
#Partially deleted in new
chr7	99652290	99660602	chr7:99652290-99660602	0	-	99652290	99652290	8553170	2	489,104,	0,8208,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	99658832	99663582	chr7:99658832-99663582	0	-	99658832	99658832	8553170	2	1827,767,	0,3983,
#Partially deleted in new
chr7	99660218	99679966	chr7:99660218-99679966	0	-	99660218	99660218	8553170	12	441,67,128,149,98,114,108,100,132,53,94,141,	0,2597,3749,4947,6494,6733,11552,12361,12565,14314,15896,19607,
#Partially deleted in new
chr7	99660227	99679996	chr7:99660227-99679996	0	-	99660227	99660227	8553170	11	146,161,1280,149,89,114,100,132,53,462,171,	0,271,2588,4938,6373,6724,12352,12556,14305,15887,19598,
#Partially deleted in new
chr7	99663541	99679996	chr7:99663541-99679996	0	-	99663541	99663541	8553170	10	554,149,89,114,108,100,132,53,94,171,	0,1624,3059,3410,8229,9038,9242,10991,12573,16284,
#Partially deleted in new
chr7	99666715	99679953	chr7:99666715-99679953	0	-	99666715	99666715	8553170	6	95,114,100,53,94,128,	0,236,5864,7817,9399,13110,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	99670909	99679996	chr7:99670909-99679996	0	-	99670909	99670909	8553170	5	969,336,53,94,171,	0,1670,3623,5205,8916,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	99671221	99680026	chr7:99671221-99680026	1	-	99671773	99679896	0	5	657,100,53,94,201,	0,1358,3311,4893,8604,
#Partially deleted in new
chr7	99672588	99679993	chr7:99672588-99679993	0	-	99672588	99672588	8553170	5	91,150,53,94,168,	0,195,1944,3526,7237,
#Partially deleted in new
chr7	99672660	99679993	chr7:99672660-99679993	0	-	99676527	99679896	789624	5	19,53,94,260,168,	0,1872,3454,3656,7165,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	99674225	99679993	chr7:99674225-99679993	0	-	99674225	99674225	8553170	3	360,94,168,	0,1889,5600,
#Partially deleted in new
chr7	99684956	99735102	chr7:99684956-99735102	1	-	99685139	99735093	789624	13	279,163,227,161,67,128,149,89,114,100,53,94,80,	0,22855,24078,25775,28512,29598,30801,32220,32569,35356,37339,46102,50066,
#Partially deleted in new
chr7	99685144	99700034	chr7:99685144-99700034	7	-	99685144	99685144	16724991	3	91,94,71,	0,10601,14819,
#Partially deleted in new
chr7	99685225	99735093	chr7:99685225-99735093	3	-	99685225	99735093	789624	15	10,101,81,163,227,161,67,128,149,89,114,100,53,94,71,	0,10520,20289,22586,23809,25506,28243,29329,30532,31951,32300,35087,37070,45833,49797,
#Partially deleted in new
chr7	99705036	99720969	chr7:99705036-99720969	0	-	99705036	99705036	8553170	10	559,163,227,161,67,128,149,89,114,657,	0,2775,3998,5695,8432,9518,10721,12140,12489,15276,
#Partially deleted in new
chr7	99705043	99735096	chr7:99705043-99735096	3	-	99705499	99735093	789624	13	552,163,227,161,67,128,149,89,114,100,53,94,74,	0,2768,3991,5688,8425,9511,10714,12133,12482,15269,17252,26015,29979,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	99715347	99717265	chr7:99715347-99717265	0	-	99715347	99715347	8553170	2	559,89,	0,1829,
#Partially deleted in new
chr7	99730572	99735196	chr7:99730572-99735196	0	-	99730572	99730572	8553170	2	580,174,	0,4450,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	99756959	99784188	chr7:99756959-99784188	3	-	99758132	99784081	789624	8	1269,163,227,161,67,128,149,178,	0,3859,5081,6895,9417,10171,11394,27051,
#Partially deleted in new
chr7	99757675	99784265	chr7:99757675-99784265	1	-	99758132	99784081	0	13	553,163,227,161,67,128,149,89,114,100,53,94,255,	0,3143,4365,6179,8701,9455,10678,12092,12446,14914,20352,22316,26335,
#Deleted in new
chr7	99766542	99766892	chr7:99766542-99766892	3	+	99766542	99766542	8553170	1	350,	0,
#Partially deleted in new
chr7	99769534	99780053	chr7:99769534-99780053	0	-	99769534	99769534	8553170	5	322,114,100,53,62,	0,587,3055,8493,10457,
#Partially deleted in new
chr7	99770131	99784184	chr7:99770131-99784184	0	-	99770131	99784081	789624	5	104,100,53,133,174,	0,2458,7896,9860,13879,
#Deleted in new
chr7	99820017	99820086	chr7:99820017-99820086	7	+	99820017	99820017	16724991	1	69,	0,
#Partially deleted in new
chr7	99828012	99866102	chr7:99828012-99866102	1	+	99828115	99855621	789624	10	174,94,36,149,128,67,161,227,163,197,	0,8440,11107,21533,27578,28820,31817,33600,35524,37893,
#Partially deleted in new
chr7	99828012	99866095	chr7:99828012-99866095	3	+	99828115	99866001	789624	13	174,94,53,100,114,89,149,128,67,161,227,163,190,	0,8440,11107,16130,19475,20153,21533,27578,28820,31817,33600,35524,37893,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	99828042	99866001	chr7:99828042-99866001	1	+	99828115	99866001	789624	10	144,94,122,53,128,67,161,227,163,96,	0,8410,10634,11077,27548,28790,31787,33570,35494,37863,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	99828042	99866001	chr7:99828042-99866001	0	+	99828115	99847534	789624	10	144,53,172,89,149,121,67,161,227,96,	0,11077,19445,20123,21503,21936,28790,31787,33570,37863,
#Partially deleted in new
chr7	99828048	99866045	chr7:99828048-99866045	1	+	99828115	99866001	789624	7	138,94,67,161,227,163,140,	0,8404,28784,31781,33564,35488,37857,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	99828048	99866045	chr7:99828048-99866045	0	+	99828115	99847613	789624	10	138,94,127,89,149,121,67,161,227,140,	0,8404,19439,20117,21497,21930,28784,31781,33564,37857,
#Partially deleted in new
chr7	99828048	99866045	chr7:99828048-99866045	1	+	99828147	99865915	789624	5	138,67,161,227,140,	0,28784,31781,33564,37857,
#Partially deleted in new
chr7	99828048	99866045	chr7:99828048-99866045	0	+	99828048	99828048	8553170	3	138,161,140,	0,31781,37857,
#Partially deleted in new
chr7	99828048	99866045	chr7:99828048-99866045	0	+	99828048	99828048	8553170	8	138,114,89,128,67,161,227,140,	0,19439,20117,27542,28784,31781,33564,37857,
#Partially deleted in new
chr7	99828048	99866045	chr7:99828048-99866045	0	+	99828048	99828048	8553170	7	138,128,67,161,227,163,140,	0,27542,28784,31781,33564,35488,37857,
#Partially deleted in new
chr7	99828048	99866045	chr7:99828048-99866045	0	+	99828048	99828048	8553170	4	138,161,227,140,	0,31781,33564,37857,
#Partially deleted in new
chr7	99828115	99866001	chr7:99828115-99866001	1	+	99828115	99866001	789624	13	71,94,53,100,114,89,149,128,67,161,227,166,96,	0,8337,11004,16027,19372,20050,21430,27475,28717,31714,33497,35418,37790,
#Partially deleted in new
chr7	99828115	99866001	chr7:99828115-99866001	1	+	99828115	99865915	789624	12	71,94,53,100,114,89,149,128,67,161,227,96,	0,8337,11004,16027,19372,20050,21430,27475,28717,31714,33497,37790,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	99828115	99866001	chr7:99828115-99866001	0	+	99828115	99850061	789624	14	71,94,53,100,114,89,149,121,128,67,161,227,163,96,	0,8337,11004,16027,19372,20050,21430,21863,27475,28717,31714,33497,35421,37790,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	99828115	99866001	chr7:99828115-99866001	0	+	99828115	99828115	8553170	10	71,94,53,767,149,67,161,227,163,96,	0,8337,11004,19372,21430,28717,31714,33497,35421,37790,
#Partially deleted in new
chr7	99855487	99861840	chr7:99855487-99861840	0	+	99855487	99855487	8553170	4	231,67,161,228,	0,1345,4342,6125,
#Deleted in new
chr7	99869840	99869894	chr7:99869840-99869894	7	+	99869840	99869840	16724991	1	54,	0,
#Deleted in new
chr7	99872167	99872258	chr7:99872167-99872258	7	+	99872167	99872167	16724991	1	91,	0,
#Deleted in new
chr7	99875986	99877057	chr7:99875986-99877057	3	-	99876061	99877033	789624	1	1071,	0,
#Partially deleted in new
chr7	99876957	99919105	chr7:99876957-99919105	0	-	99876989	99919105	789624	6	94,98,23,231,96,97,	0,26260,26618,31624,32607,42051,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	99890412	99919600	chr7:99890412-99919600	1	-	99892162	99919401	789624	6	2334,98,23,231,96,592,	0,12805,13163,18169,19152,28596,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	99890412	99919531	chr7:99890412-99919531	3	-	99892162	99919401	789624	7	2334,98,23,231,96,78,523,	0,12805,13163,18169,19152,26289,28596,
#Partially deleted in new
chr7	99901165	99919493	chr7:99901165-99919493	1	-	99902130	99919401	789624	6	1009,98,23,231,96,485,	0,2052,2410,7416,8399,17843,
#Deleted in new
chr7	99908245	99909598	chr7:99908245-99909598	0	-	99908245	99908245	8553170	2	567,34,	0,1319,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	99929391	99948620	chr7:99929391-99948620	3	+	99929391	99929391	8553170	3	327,214,139,	0,14583,19090,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	99936609	99936711	chr7:99936609-99936711	3	+	99936609	99936609	8553170	1	102,	0,
#Deleted in new
chr7	99952032	99952158	chr7:99952032-99952158	3	+	99952032	99952032	8553170	1	126,	0,
#Deleted in new
chr7	99966719	99967593	chr7:99966719-99967593	0	-	99966719	99966719	8553170	2	567,112,	0,762,
#Partially deleted in new
chr7	99966729	99976157	chr7:99966729-99976157	3	-	99967002	99976020	0	4	557,276,261,213,	0,1425,5016,9215,
#Partially deleted in new
chr7	99966730	99971994	chr7:99966730-99971994	0	-	99967192	99971994	789624	3	556,23,140,	0,1424,5124,
#Partially deleted in new
chr7	99966737	99976017	chr7:99966737-99976017	1	-	99968074	99976011	789624	3	1693,261,73,	0,5008,9207,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	99967108	99968763	chr7:99967108-99968763	0	-	99967108	99967108	8553170	2	178,609,	0,1046,
#Partially deleted in new
chr7	99971564	99976042	chr7:99971564-99976042	0	-	99971564	99971564	8553170	2	442,98,	0,4380,
#Partially deleted in new
chr7	99980761	99987535	chr7:99980761-99987535	7	+	99980761	99980761	16724991	4	87,261,276,278,	0,2382,5011,6496,
#Partially deleted in new
chr7	99980761	99984237	chr7:99980761-99984237	5	+	99980761	99980761	16724991	2	87,1094,	0,2382,
#Deleted in new
chr7	99992396	99993050	chr7:99992396-99993050	7	+	99992396	99992396	16724991	1	654,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	100015571	100041688	chr7:100015571-100041688	1	+	100029919	100034197	789624	4	155,92,127,8384,	0,14289,14677,17733,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	100015580	100041689	chr7:100015580-100041689	3	+	100023506	100034197	789624	6	146,514,154,92,127,8385,	0,7838,8573,14280,14668,17724,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	100015598	100024960	chr7:100015598-100024960	0	+	100015598	100015598	8553170	3	128,514,807,	0,7820,8555,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	100016821	100023882	chr7:100016821-100023882	0	+	100023506	100023882	789624	2	109,464,	0,6597,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	100023407	100041688	chr7:100023407-100041688	1	+	100023614	100034197	789624	6	54,381,154,92,127,8384,	0,144,746,6453,6841,9897,
#Partially deleted in new
chr7	100049773	100065036	chr7:100049773-100065036	3	+	100057006	100064617	789624	4	68,495,193,1249,	0,7137,7924,14014,
#Partially deleted in new
chr7	100049773	100065038	chr7:100049773-100065038	1	+	100057006	100064651	789624	5	68,495,193,192,956,	0,7137,7924,14014,14309,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	100049793	100057841	chr7:100049793-100057841	0	+	100057006	100057841	789624	4	48,133,495,144,	0,1684,7117,7904,
#Partially deleted in new
chr7	100049798	100065037	chr7:100049798-100065037	1	+	100057006	100064617	789624	5	43,366,18,193,1250,	0,7112,7589,7899,13989,
#Partially deleted in new
chr7	100056910	100064255	chr7:100056910-100064255	0	+	100056910	100056910	8553170	3	495,193,173,	0,787,7172,
#Partially deleted in new
chr7	100064032	100081727	chr7:100064032-100081727	1	-	100064787	100077357	789624	6	880,127,89,131,121,93,	0,11102,11509,13270,15503,17602,
#Partially deleted in new
chr7	100069971	100081764	chr7:100069971-100081764	3	-	100071142	100077357	789624	5	2241,127,89,131,130,	0,5163,5570,7331,11663,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	100069978	100079167	chr7:100069978-100079167	1	-	100071142	100077357	789624	5	2234,127,89,537,486,	0,5156,5563,7324,8703,
#Partially deleted in new
chr7	100069987	100081740	chr7:100069987-100081740	1	-	100071142	100077357	789624	6	2225,127,89,131,121,106,	0,5147,5554,7315,9548,11647,
#Partially deleted in new
chr7	100070176	100081762	chr7:100070176-100081762	0	-	100070176	100070176	8553170	3	2036,496,128,	0,4958,11458,
#Partially deleted in new
chr7	100071929	100081730	chr7:100071929-100081730	0	-	100071929	100075577	789624	4	283,127,89,96,	0,3205,3612,9705,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	100071929	100082548	chr7:100071929-100082548	0	-	100071929	100077357	789624	6	283,127,89,131,121,248,	0,3205,3612,5373,7606,10371,
#Partially deleted in new
chr7	100071929	100081739	chr7:100071929-100081739	0	-	100071929	100077357	789624	5	283,127,89,131,105,	0,3205,3612,5373,9705,
#Partially deleted in new
chr7	100072079	100081738	chr7:100072079-100081738	0	-	100072079	100075577	789624	5	133,127,89,121,104,	0,3055,3462,7456,9555,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	100072170	100077587	chr7:100072170-100077587	0	-	100072170	100077357	789624	4	42,127,89,285,	0,2964,3371,5132,
#Partially deleted in new
chr7	100075229	100081703	chr7:100075229-100081703	0	-	100075229	100075229	8553170	4	401,131,121,69,	0,2073,4306,6405,
#Partially deleted in new
chr7	100075235	100081705	chr7:100075235-100081705	0	-	100075235	100075577	789624	5	26,89,205,121,71,	0,306,1993,4300,6399,
#Partially deleted in new
chr7	100075311	100081709	chr7:100075311-100081709	0	-	100075311	100075311	8553170	4	319,131,37,75,	0,1991,4224,6323,
#Partially deleted in new
chr7	100075316	100081711	chr7:100075316-100081711	0	-	100075316	100075316	8553170	3	314,131,77,	0,1986,6318,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	100077017	100081737	chr7:100077017-100081737	0	-	100077017	100077017	8553170	3	416,121,103,	0,2518,4617,
#Partially deleted in new
chr7	100088953	100092200	chr7:100088953-100092200	3	+	100088990	100091789	0	10	113,126,132,89,63,48,115,93,101,552,	0,336,661,1445,1638,1948,2084,2284,2466,2695,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	100088968	100090362	chr7:100088968-100090362	0	+	100088968	100088968	8553170	2	98,1073,	0,321,
#Deleted in new
chr7	100088974	100089627	chr7:100088974-100089627	0	+	100089303	100089627	789624	3	79,126,13,	0,315,640,
#Partially deleted in new
chr7	100088980	100091905	chr7:100088980-100091905	1	+	100088990	100091789	789624	10	86,123,132,89,63,48,115,93,101,257,	0,312,634,1418,1611,1921,2057,2257,2439,2668,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	100088981	100090238	chr7:100088981-100090238	0	+	100088981	100088981	8553170	3	85,126,624,	0,308,633,
#Partially deleted in new
chr7	100088989	100091248	chr7:100088989-100091248	0	+	100088989	100088989	8553170	5	77,126,132,63,347,	0,300,625,1602,1912,
#Partially deleted in new
chr7	100088992	100090780	chr7:100088992-100090780	0	+	100088992	100088992	8553170	5	74,126,132,89,189,	0,297,622,1406,1599,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	100090361	100091750	chr7:100090361-100091750	0	+	100090361	100090361	8553170	6	293,48,115,93,101,102,	0,540,676,876,1058,1287,
#Deleted in new
chr7	100090427	100091907	chr7:100090427-100091907	0	+	100090427	100091435	789624	7	60,63,48,115,70,101,259,	0,164,474,610,810,992,1221,
#Deleted in new
chr7	100090436	100091448	chr7:100090436-100091448	0	+	100090436	100090436	8553170	4	51,561,93,29,	0,155,801,983,
#Partially deleted in new
chr7	100092727	100101370	chr7:100092727-100101370	0	-	100092727	100092727	8553170	14	406,110,169,84,394,84,132,115,150,138,381,165,80,107,	0,564,1445,2659,3046,4573,4886,5106,5413,5850,6295,6861,7286,8536,
#Partially deleted in new
chr7	100092728	100100780	chr7:100092728-100100780	1	-	100092931	100099076	789624	14	405,110,169,84,394,84,132,115,150,138,381,165,80,568,	0,563,1444,2658,3045,4572,4885,5105,5412,5849,6294,6860,7285,7484,
#Partially deleted in new
chr7	100092728	100101940	chr7:100092728-100101940	1	-	100092931	100099076	789624	14	405,110,169,84,394,84,132,115,150,138,381,165,80,677,	0,563,1444,2658,3045,4572,4885,5105,5412,5849,6294,6860,7285,8535,
#Partially deleted in new
chr7	100092779	100101940	chr7:100092779-100101940	1	-	100092931	100101294	789624	9	337,115,150,138,181,125,165,80,677,	0,5054,5361,5798,6243,6499,6809,7234,8484,
#Partially deleted in new
chr7	100092780	100101940	chr7:100092780-100101940	3	-	100092931	100101294	789624	15	353,110,169,84,394,84,132,115,150,138,181,125,165,80,677,	0,511,1392,2606,2993,4520,4833,5053,5360,5797,6242,6498,6808,7233,8483,
#Partially deleted in new
chr7	100092780	100100757	chr7:100092780-100100757	0	-	100092780	100092780	8553170	14	353,110,169,84,394,84,132,115,150,138,381,165,80,545,	0,511,1392,2606,2993,4520,4833,5053,5360,5797,6242,6808,7233,7432,
#Partially deleted in new
chr7	100093291	100099737	chr7:100093291-100099737	0	-	100095807	100099737	789624	5	110,169,84,200,85,	0,881,2095,2482,6361,
#Partially deleted in new
chr7	100093315	100095664	chr7:100093315-100095664	0	-	100093315	100093315	8553170	3	86,169,278,	0,857,2071,
#Deleted in new
chr7	100093559	100093643	chr7:100093559-100093643	3	-	100093559	100093559	5263520	1	84,	0,
#Deleted in new
chr7	100093767	100093847	chr7:100093767-100093847	3	-	100093767	100093767	5263520	1	80,	0,
#Deleted in new
chr7	100093992	100094074	chr7:100093992-100094074	3	-	100093992	100093992	5263520	1	82,	0,
#Deleted in new
chr7	100098058	100101409	chr7:100098058-100101409	0	-	100098058	100098058	8553170	5	232,138,731,80,146,	0,519,964,1955,3205,
#Deleted in new
chr7	100098139	100100869	chr7:100098139-100100869	0	-	100098139	100099358	789624	7	151,138,181,125,165,80,657,	0,438,883,1139,1449,1874,2073,
#Deleted in new
chr7	100099318	100100473	chr7:100099318-100100473	0	-	100099318	100099318	8553170	3	435,80,261,	0,695,894,
#Deleted in new
chr7	100099463	100101310	chr7:100099463-100101310	0	-	100099463	100099463	8553170	3	290,80,111,	0,550,1736,
#Deleted in new
chr7	100099685	100100393	chr7:100099685-100100393	0	-	100099685	100099685	8553170	2	68,380,	0,328,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	100101548	100103648	chr7:100101548-100103648	0	+	100101714	100102293	789624	7	224,89,148,107,97,111,37,	0,331,697,1126,1315,1860,2063,
#Partially deleted in new
chr7	100101556	100107179	chr7:100101556-100107179	1	+	100101714	100106882	0	15	216,89,107,97,111,81,63,67,54,107,95,45,51,112,522,	0,323,1118,1307,1852,2055,2535,3317,3488,3683,3888,4402,4684,4846,5101,
#Partially deleted in new
chr7	100101556	100107177	chr7:100101556-100107177	1	+	100101714	100106882	789624	15	216,110,107,97,111,81,63,67,54,107,95,45,51,112,520,	0,323,1118,1307,1852,2055,2535,3317,3488,3683,3888,4402,4684,4846,5101,
#Partially deleted in new
chr7	100101556	100106514	chr7:100101556-100106514	0	+	100101714	100106514	789624	12	216,89,111,81,63,67,54,107,95,45,51,112,	0,323,1852,2055,2535,3317,3488,3683,3888,4402,4684,4846,
#Partially deleted in new
chr7	100101556	100107140	chr7:100101556-100107140	0	+	100101714	100103448	789624	14	216,89,107,111,81,63,67,54,107,95,45,51,112,483,	0,323,1118,1852,2055,2535,3317,3488,3683,3888,4402,4684,4846,5101,
#Partially deleted in new
chr7	100101590	100105539	chr7:100101590-100105539	0	+	100101714	100105539	789624	10	182,89,72,111,81,63,67,54,107,95,	0,289,1084,1818,2021,2501,3283,3454,3649,3854,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	100101635	100103445	chr7:100101635-100103445	0	+	100101635	100101635	8553170	5	137,514,107,97,37,	0,244,1039,1228,1773,
#Partially deleted in new
chr7	100101658	100106291	chr7:100101658-100106291	0	+	100101714	100105290	789624	11	114,89,107,97,111,81,63,107,95,45,51,	0,221,1016,1205,1750,1953,2433,3581,3786,4300,4582,
#Partially deleted in new
chr7	100101663	100110319	chr7:100101663-100110319	3	+	100101714	100106882	0	16	109,89,107,97,111,81,63,67,54,107,95,45,51,112,255,129,	0,216,1011,1200,1745,1948,2428,3210,3381,3576,3781,4295,4577,4739,4994,8527,
#Partially deleted in new
chr7	100101768	100106042	chr7:100101768-100106042	0	+	100101768	100101768	8553170	10	221,107,97,111,81,63,54,107,95,84,	0,906,1095,1640,1843,2323,3276,3471,3676,4190,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	100101865	100109039	chr7:100101865-100109039	0	+	100101865	100105062	789624	13	103,107,97,111,81,63,54,107,95,45,51,112,2382,	0,809,998,1543,1746,2226,3179,3374,3579,4093,4375,4537,4792,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	100102060	100107148	chr7:100102060-100107148	1	+	100103441	100106882	789624	14	333,107,97,111,81,63,67,54,107,95,45,51,112,491,	0,614,803,1348,1551,2031,2813,2984,3179,3384,3898,4180,4342,4597,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	100102085	100103296	chr7:100102085-100103296	0	+	100102085	100102085	8553170	4	308,107,97,69,	0,589,778,1142,
#Partially deleted in new
chr7	100103567	100105513	chr7:100103567-100105513	0	+	100103567	100103567	8553170	6	125,63,67,54,107,69,	0,524,1306,1477,1672,1877,
#Partially deleted in new
chr7	100105256	100110345	chr7:100105256-100110345	0	+	100105256	100110280	789624	6	90,95,45,51,112,155,	0,188,702,984,1146,4934,
#Partially deleted in new
chr7	100105335	100107144	chr7:100105335-100107144	0	+	100105335	100106882	789624	6	11,95,45,51,112,364,	0,109,623,905,1067,1445,
#Deleted in new
chr7	100105976	100106792	chr7:100105976-100106792	0	+	100105976	100105976	8553170	3	315,112,135,	0,426,681,
#Partially deleted in new
chr7	100107069	100119359	chr7:100107069-100119359	0	-	100113393	100114209	789624	15	554,198,174,126,75,183,102,78,146,120,57,90,87,215,480,	0,856,1297,2878,3130,4069,4658,4852,5038,5728,6279,6610,6798,6984,11810,
#Partially deleted in new
chr7	100107069	100119398	chr7:100107069-100119398	3	-	100107245	100114209	0	15	554,198,174,126,75,183,102,78,146,120,57,154,87,215,195,	0,856,1297,2878,3130,4069,4658,4852,5038,5728,6279,6546,6798,6984,12134,
#Partially deleted in new
chr7	100107077	100119364	chr7:100107077-100119364	1	-	100107245	100114209	0	15	546,198,174,126,75,183,102,78,146,120,57,154,87,215,36,	0,848,1289,2870,3122,4061,4650,4844,5030,5720,6271,6538,6790,6976,12251,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	100107077	100114558	chr7:100107077-100114558	1	-	100107245	100114380	789624	14	546,198,174,126,75,183,102,78,146,120,57,154,87,505,	0,848,1289,2870,3122,4061,4650,4844,5030,5720,6271,6538,6790,6976,
#Partially deleted in new
chr7	100107078	100119346	chr7:100107078-100119346	1	-	100107245	100114209	0	15	545,198,174,126,75,183,102,78,146,120,57,154,87,215,467,	0,847,1288,2869,3121,4060,4649,4843,5029,5719,6270,6537,6789,6975,11801,
#Partially deleted in new
chr7	100107167	100119841	chr7:100107167-100119841	1	-	100107245	100119746	0	15	456,198,174,126,75,183,102,78,146,120,57,154,87,215,147,	0,758,1199,2780,3032,3971,4560,4754,4940,5630,6181,6448,6700,6886,12527,
#Partially deleted in new
chr7	100110076	100111324	chr7:100110076-100111324	0	-	100110076	100110076	8553170	2	198,186,	0,1062,
#Partially deleted in new
chr7	100111798	100118976	chr7:100111798-100118976	0	-	100111798	100111798	8553170	8	31,78,146,120,421,87,215,97,	0,123,309,999,1550,2069,2255,7081,
#Partially deleted in new
chr7	100111953	100119349	chr7:100111953-100119349	0	-	100111953	100114209	789624	8	46,146,120,57,154,87,178,146,	0,154,844,1395,1662,1914,2100,7250,
#Partially deleted in new
chr7	100111964	100119317	chr7:100111964-100119317	0	-	100111964	100114209	789624	7	35,146,120,154,87,215,114,	0,143,833,1651,1903,2089,7239,
#Partially deleted in new
chr7	100112846	100119364	chr7:100112846-100119364	0	-	100112846	100114209	789624	5	71,154,87,215,36,	0,769,1021,1207,6482,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	100113348	100119339	chr7:100113348-100119339	0	-	100113348	100114209	789624	6	57,154,87,185,132,136,	0,267,519,735,5169,5855,
#Partially deleted in new
chr7	100113400	100119567	chr7:100113400-100119567	0	-	100113400	100114209	789624	5	5,154,87,215,151,	0,215,467,653,6016,
#Partially deleted in new
chr7	100113641	100119349	chr7:100113641-100119349	0	-	100113641	100114209	789624	4	128,87,185,146,	0,226,442,5562,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	100113669	100119372	chr7:100113669-100119372	0	-	100113669	100114209	789624	5	100,87,215,132,169,	0,198,384,4848,5534,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	100113881	100119348	chr7:100113881-100119348	0	-	100113881	100114209	789624	4	73,215,132,117,	0,172,4636,5350,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	100114168	100119304	chr7:100114168-100119304	0	-	100114168	100114209	789624	3	100,120,101,	0,2345,5035,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	100114181	100119356	chr7:100114181-100119356	0	-	100114181	100114209	789624	4	87,99,132,153,	0,2332,4336,5022,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	100114228	100119366	chr7:100114228-100119366	0	-	100114228	100114228	8553170	3	40,254,163,	0,4167,4975,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	100115213	100127139	chr7:100115213-100127139	3	-	100115213	100115213	8553170	2	439,133,	0,11793,
#Partially deleted in new
chr7	100119612	100125511	chr7:100119612-100125511	3	+	100119744	100124888	789624	6	250,127,97,123,118,787,	0,2646,2868,3171,4901,5112,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	100119954	100121399	chr7:100119954-100121399	0	+	100119954	100119954	8553170	2	445,239,	0,1206,
#Partially deleted in new
chr7	100120025	100122906	chr7:100120025-100122906	0	+	100122798	100122906	789624	4	374,127,97,123,	0,2233,2455,2758,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	100122051	100125076	chr7:100122051-100125076	0	+	100122051	100122051	8553170	5	334,97,123,118,352,	0,429,732,2462,2673,
#Partially deleted in new
chr7	100122258	100125180	chr7:100122258-100125180	0	+	100122258	100124440	789624	5	127,97,123,200,456,	0,222,525,2173,2466,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	100126693	100128498	chr7:100126693-100128498	3	+	100127395	100128196	0	2	371,1131,	0,674,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	100126784	100127736	chr7:100126784-100127736	0	+	100127395	100127736	789624	2	349,369,	0,583,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	100130963	100140439	chr7:100130963-100140439	3	+	100130963	100130963	8553170	2	74,268,	0,9208,
#Partially deleted in new
chr7	100139628	100140682	chr7:100139628-100140682	7	-	100139628	100139628	16724991	2	346,389,	0,665,
#Partially deleted in new
chr7	100148906	100154203	chr7:100148906-100154203	3	+	100148972	100153964	0	4	69,81,118,337,	0,592,4493,4960,
#Partially deleted in new
chr7	100148911	100154203	chr7:100148911-100154203	1	+	100148972	100153964	789624	3	64,118,337,	0,4488,4955,
#Partially deleted in new
chr7	100148912	100154203	chr7:100148912-100154203	1	+	100148972	100153896	789624	4	63,81,118,354,	0,586,4487,4937,
#Partially deleted in new
chr7	100148933	100154203	chr7:100148933-100154203	0	+	100148933	100148933	8553170	4	42,67,118,337,	0,565,4466,4933,
#Partially deleted in new
chr7	100148937	100154010	chr7:100148937-100154010	1	+	100148972	100153729	789624	3	38,81,611,	0,561,4462,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	100148937	100149887	chr7:100148937-100149887	0	+	100148937	100148937	8553170	2	38,389,	0,561,
#Partially deleted in new
chr7	100148977	100154212	chr7:100148977-100154212	1	+	100153489	100153964	789624	4	76,81,118,346,	0,521,4422,4889,
#Partially deleted in new
chr7	100148993	100154203	chr7:100148993-100154203	1	+	100153489	100153896	789624	4	60,81,118,354,	0,505,4406,4856,
#Partially deleted in new
chr7	100149356	100154203	chr7:100149356-100154203	1	+	100153489	100153964	789624	4	223,42,118,337,	0,3359,4043,4510,
#Partially deleted in new
chr7	100149358	100153898	chr7:100149358-100153898	0	+	100153489	100153898	789624	3	221,118,32,	0,4041,4508,
#Partially deleted in new
chr7	100152679	100154203	chr7:100152679-100154203	0	+	100152679	100152679	8553170	3	78,118,337,	0,720,1187,
#Deleted in new
chr7	100153485	100155944	chr7:100153485-100155944	0	+	100153485	100155601	789624	2	32,369,	0,2090,
#Partially deleted in new
chr7	100154419	100158685	chr7:100154419-100158685	3	-	100155010	100158499	789624	11	745,194,155,164,83,148,121,87,130,96,597,	0,842,1251,1966,2214,2425,2674,2953,3213,3423,3669,
#Partially deleted in new
chr7	100154419	100156440	chr7:100154419-100156440	0	-	100155908	100156440	789624	4	745,194,261,55,	0,842,1251,1966,
#Partially deleted in new
chr7	100154419	100158659	chr7:100154419-100158659	0	-	100157456	100158499	789624	9	745,194,155,83,148,121,87,96,571,	0,842,1251,2214,2425,2674,2953,3423,3669,
#Partially deleted in new
chr7	100154419	100158020	chr7:100154419-100158020	1	-	100155010	100157131	789624	10	745,194,155,164,83,148,121,87,130,178,	0,842,1251,1966,2214,2425,2674,2953,3213,3423,
#Partially deleted in new
chr7	100154423	100157139	chr7:100154423-100157139	0	-	100155908	100157139	789624	7	741,185,249,164,83,148,46,	0,838,1247,1962,2210,2421,2670,
#Partially deleted in new
chr7	100154423	100158715	chr7:100154423-100158715	1	-	100155010	100157131	789624	11	741,194,155,164,83,148,121,87,130,96,127,	0,838,1247,1962,2210,2421,2670,2949,3209,3419,4165,
#Deleted in new
chr7	100154474	100155674	chr7:100154474-100155674	0	-	100154474	100154474	8553170	2	690,413,	0,787,
#Partially deleted in new
chr7	100154823	100157759	chr7:100154823-100157759	0	-	100157208	100157759	789624	9	341,194,155,164,83,148,121,167,127,	0,438,847,1562,1810,2021,2270,2469,2809,
#Deleted in new
chr7	100156264	100157199	chr7:100156264-100157199	0	-	100156264	100156264	8553170	4	285,83,152,106,	0,369,580,829,
#Deleted in new
chr7	100156604	100156669	chr7:100156604-100156669	3	-	100156604	100156604	5263520	1	65,	0,
#Deleted in new
chr7	100156938	100157452	chr7:100156938-100157452	0	-	100156938	100156938	8553170	2	276,80,	0,434,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	100159243	100167284	chr7:100159243-100167284	1	-	100159927	100167095	789624	3	1716,304,314,	0,7258,7727,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	100159243	100168112	chr7:100159243-100168112	0	-	100159243	100159243	8553170	3	1716,304,1142,	0,7258,7727,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	100159244	100168750	chr7:100159244-100168750	3	-	100159927	100167095	789624	4	1715,304,313,205,	0,7257,7726,9301,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	100159645	100168613	chr7:100159645-100168613	1	-	100160421	100167095	789624	3	1314,313,68,	0,7325,8900,
#Partially deleted in new
chr7	100159815	100167230	chr7:100159815-100167230	1	-	100160421	100167095	789624	2	1144,260,	0,7155,
#Partially deleted in new
chr7	100160728	100168142	chr7:100160728-100168142	0	-	100160728	100167095	789624	3	231,313,35,	0,6242,7379,
#Deleted in new
chr7	100166532	100168069	chr7:100166532-100168069	0	-	100166532	100167095	789624	3	273,313,149,	0,438,1388,
#Deleted in new
chr7	100166598	100168135	chr7:100166598-100168135	0	-	100166598	100167095	789624	3	207,313,28,	0,372,1509,
#Partially deleted in new
chr7	100169605	100177367	chr7:100169605-100177367	3	-	100170229	100177199	789624	10	878,176,140,147,131,163,81,323,159,334,	0,1655,1933,2173,2481,4229,5079,5966,6601,7428,
#Deleted in new
chr7	100171068	100172218	chr7:100171068-100172218	0	-	100171068	100171068	8553170	4	368,140,147,132,	0,470,710,1018,
#Partially deleted in new
chr7	100171650	100175785	chr7:100171650-100175785	0	-	100171650	100171650	8553170	6	28,181,131,163,81,214,	0,128,436,2184,3034,3921,
#Partially deleted in new
chr7	100172189	100177369	chr7:100172189-100177369	0	-	100174685	100177199	789624	5	28,163,81,159,336,	0,1645,2495,4017,4844,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	100173457	100177372	chr7:100173457-100177372	0	-	100173457	100173457	8553170	4	1308,323,159,339,	0,2114,2749,3576,
#Partially deleted in new
chr7	100177562	100214380	chr7:100177562-100214380	3	+	100180556	100214015	789624	34	343,180,103,117,97,77,205,152,74,124,99,80,108,115,106,104,93,90,201,71,88,81,93,169,137,102,149,129,158,175,102,82,72,374,	0,2930,4527,5160,8637,10890,11249,11882,17746,19593,20215,20524,20912,21280,21699,21978,22673,22890,23206,23527,23701,24223,24386,24609,24891,26458,27064,27442,27664,33448,33875,34232,36172,36444,
#Partially deleted in new
chr7	100177742	100214380	chr7:100177742-100214380	1	+	100180556	100214015	789624	32	230,180,103,117,205,152,74,124,99,80,108,115,106,104,93,90,201,71,88,81,93,169,137,102,149,129,158,175,102,82,72,374,	0,2750,4347,4980,11069,11702,17566,19413,20035,20344,20732,21100,21519,21798,22493,22710,23026,23347,23521,24043,24206,24429,24711,26278,26884,27262,27484,33268,33695,34052,35992,36264,
#Partially deleted in new
chr7	100177742	100214387	chr7:100177742-100214387	1	+	100180556	100214015	789624	34	263,180,103,117,97,77,205,152,74,124,99,80,108,115,106,104,93,90,201,71,88,81,93,169,137,102,149,129,158,175,105,82,72,381,	0,2750,4347,4980,8457,10710,11069,11702,17566,19413,20035,20344,20732,21100,21519,21798,22493,22710,23026,23347,23521,24043,24206,24429,24711,26278,26884,27262,27484,33268,33692,34052,35992,36264,
#Partially deleted in new
chr7	100177742	100214387	chr7:100177742-100214387	1	+	100180556	100214015	789624	32	263,180,103,117,205,152,74,124,99,80,108,115,106,104,93,90,201,71,88,81,93,169,137,102,149,129,158,175,102,82,72,381,	0,2750,4347,4980,11069,11702,17566,19413,20035,20344,20732,21100,21519,21798,22493,22710,23026,23347,23521,24043,24206,24429,24711,26278,26884,27262,27484,33268,33695,34052,35992,36264,
#Partially deleted in new
chr7	100177865	100186297	chr7:100177865-100186297	0	+	100180556	100186297	789624	5	107,180,103,117,98,	0,2627,4224,4857,8334,
#Partially deleted in new
chr7	100177915	100214381	chr7:100177915-100214381	1	+	100180556	100214015	789624	34	90,180,103,117,97,77,205,152,74,124,99,80,108,115,106,104,93,90,201,71,88,81,93,169,137,102,149,129,158,175,102,82,72,375,	0,2577,4174,4807,8284,10537,10896,11529,17393,19240,19862,20171,20559,20927,21346,21625,22320,22537,22853,23174,23348,23870,24033,24256,24538,26105,26711,27089,27311,33095,33522,33879,35819,36091,
#Partially deleted in new
chr7	100177928	100182839	chr7:100177928-100182839	0	+	100180556	100182839	789624	4	134,180,103,117,	0,2564,4161,4794,
#Partially deleted in new
chr7	100177934	100214387	chr7:100177934-100214387	0	+	100177934	100177934	8553170	27	71,180,103,117,97,564,152,74,124,99,80,108,115,106,104,93,90,201,71,88,57,76,175,105,82,72,381,	0,2558,4155,4788,8265,10518,11510,17374,19221,19843,20152,20540,20908,21327,21606,22301,22518,22834,23155,23329,23851,27374,33076,33500,33860,35800,36072,
#Partially deleted in new
chr7	100177935	100189468	chr7:100177935-100189468	0	+	100180556	100189468	789624	6	70,180,103,117,205,24,	0,2557,4154,4787,10876,11509,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	100177936	100180895	chr7:100177936-100180895	0	+	100177936	100177936	8553170	2	69,403,	0,2556,
#Partially deleted in new
chr7	100181377	100189596	chr7:100181377-100189596	0	+	100181377	100181377	8553170	4	163,103,117,152,	0,712,1345,8067,
#Partially deleted in new
chr7	100197441	100214381	chr7:100197441-100214381	0	+	100197441	100197441	8553170	25	52,99,80,108,115,106,104,93,90,201,71,88,81,93,169,137,102,149,129,158,175,102,82,72,375,	0,336,645,1033,1401,1820,2099,2794,3011,3327,3648,3822,4344,4507,4730,5012,6579,7185,7563,7785,13569,13996,14353,16293,16565,
#Partially deleted in new
chr7	100197473	100214383	chr7:100197473-100214383	0	+	100197473	100197473	8553170	25	140,99,80,108,115,106,104,93,90,201,71,88,81,93,169,137,102,149,129,158,175,102,82,72,377,	0,304,613,1001,1369,1788,2067,2762,2979,3295,3616,3790,4312,4475,4698,4980,6547,7153,7531,7753,13537,13964,14321,16261,16533,
#Partially deleted in new
chr7	100197801	100199602	chr7:100197801-100199602	0	+	100197801	100197801	8553170	5	75,80,108,115,341,	0,285,673,1041,1460,
#Deleted in new
chr7	100200137	100200946	chr7:100200137-100200946	0	+	100200137	100200137	8553170	2	405,178,	0,631,
#Deleted in new
chr7	100200146	100202015	chr7:100200146-100202015	0	+	100200146	100200146	8553170	7	182,90,201,71,88,81,67,	0,306,622,943,1117,1639,1802,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	100200652	100272206	chr7:100200652-100272206	0	-	100200652	100200652	789624	8	1951,601,87,124,129,194,71,369,	0,10741,12394,21944,22917,23229,32951,71185,
#Partially deleted in new
chr7	100200652	100272208	chr7:100200652-100272208	0	-	100200652	100200652	789624	6	1951,124,129,194,71,371,	0,21944,22917,23229,32951,71185,
#Partially deleted in new
chr7	100200652	100272218	chr7:100200652-100272218	0	-	100200652	100200652	8553170	5	1951,129,194,71,381,	0,22917,23229,32951,71185,
#Partially deleted in new
chr7	100200659	100272232	chr7:100200659-100272232	3	-	100223617	100271983	789624	5	1944,129,194,71,395,	0,22910,23222,32944,71178,
#Partially deleted in new
chr7	100202212	100211551	chr7:100202212-100211551	0	-	100202212	100202212	8553170	2	391,158,	0,9181,
#Partially deleted in new
chr7	100202240	100223943	chr7:100202240-100223943	0	-	100202240	100202240	8553170	3	363,129,62,	0,21329,21641,
#Partially deleted in new
chr7	100202289	100223698	chr7:100202289-100223698	0	-	100202289	100202289	8553170	2	314,129,	0,21280,
#Partially deleted in new
chr7	100202312	100272187	chr7:100202312-100272187	0	-	100202312	100202312	8553170	5	291,124,194,71,350,	0,20284,21569,31291,69525,
#Partially deleted in new
chr7	100205272	100214380	chr7:100205272-100214380	0	+	100205272	100214015	789624	6	112,175,105,82,72,374,	0,5738,6162,6522,8462,8734,
#Partially deleted in new
chr7	100205356	100221488	chr7:100205356-100221488	0	+	100205356	100218673	789624	9	28,175,105,82,72,1412,560,61,561,	0,5654,6078,6438,8378,13260,14757,15403,15571,
#Partially deleted in new
chr7	100211583	100272214	chr7:100211583-100272214	0	-	100211583	100211583	8553170	6	411,124,129,194,71,377,	0,11013,11986,12298,22020,60254,
#Partially deleted in new
chr7	100211658	100214382	chr7:100211658-100214382	0	+	100211658	100211658	8553170	3	218,72,376,	0,2076,2348,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	100211934	100215179	chr7:100211934-100215179	0	-	100211934	100211934	8553170	3	60,181,210,	0,1018,3035,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	100212021	100272214	chr7:100212021-100272214	0	-	100212021	100212021	8553170	6	1112,124,129,194,71,377,	0,10575,11548,11860,21582,59816,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	100218240	100219335	chr7:100218240-100219335	0	+	100218240	100218240	8553170	2	401,87,	0,1008,
#Deleted in new
chr7	100219235	100221490	chr7:100219235-100221490	3	+	100219910	100221251	789624	6	165,316,351,127,61,563,	0,477,878,1311,1524,1692,
#Partially deleted in new
chr7	100222596	100271983	chr7:100222596-100271983	4	-	100222596	100222596	16724991	5	124,129,194,71,146,	0,973,1285,11007,49241,
#Partially deleted in new
chr7	100222644	100246548	chr7:100222644-100246548	0	-	100222644	100222644	8553170	5	76,129,194,71,87,	0,925,1237,10959,23817,
#Partially deleted in new
chr7	100307701	100322196	chr7:100307701-100322196	3	+	100307885	100319990	789624	11	290,219,219,219,219,219,59,86,244,105,1306,	0,1272,2658,4048,5438,6830,8083,9368,11863,12229,13189,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	100314440	100321134	chr7:100314440-100321134	0	+	100314440	100314440	8553170	5	310,59,86,244,1204,	0,1344,2629,5124,5490,
#Partially deleted in new
chr7	100320991	100341908	chr7:100320991-100341908	7	-	100320991	100320991	16724991	7	93,184,103,87,140,527,94,	0,7844,9190,9471,11450,14846,20823,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	100330776	100330877	chr7:100330776-100330877	3	-	100330776	100330776	8553170	1	101,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	100336078	100351900	chr7:100336078-100351900	7	+	100336078	100336078	16724991	6	142,86,117,104,157,649,	0,2100,2694,9786,13652,15173,
#Partially deleted in new
chr7	100336103	100352489	chr7:100336103-100352489	0	+	100336103	100336103	8553170	5	234,86,117,104,327,	0,2075,2669,9761,16059,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr7	100336113	100367831	chr7:100336113-100367831	3	+	100336113	100336113	789624	18	224,86,117,104,89,159,316,104,154,127,61,640,98,134,147,390,201,483,	0,2065,2659,9751,13685,15138,16049,16450,16647,16883,17096,17259,19029,20636,22106,22576,23223,31235,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	100336122	100352211	chr7:100336122-100352211	0	+	100336122	100336122	8553170	7	215,86,117,104,89,159,49,	0,2056,2650,9742,13676,15129,16040,
#Partially deleted in new
chr7	100336124	100338990	chr7:100336124-100338990	4	+	100336124	100336124	16724991	3	213,86,218,	0,2054,2648,
#Partially deleted in new
chr7	100336124	100341328	chr7:100336124-100341328	4	+	100336124	100336124	16724991	4	96,86,117,384,	0,2054,2648,4820,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr7	100336242	100367663	chr7:100336242-100367663	0	+	100336242	100336242	789624	17	95,86,117,104,157,159,217,351,127,61,111,98,134,147,181,201,315,	0,1936,2530,9622,13488,15009,16019,16321,16754,16967,17130,18900,20507,21977,22656,23094,31106,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	100336411	100349754	chr7:100336411-100349754	4	+	100336411	100336411	16724991	6	198,23,86,117,104,24,	0,1035,1767,2361,9453,13319,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	100337576	100338805	chr7:100337576-100338805	4	+	100337576	100337576	16724991	3	438,86,33,	0,602,1196,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	100338176	100350158	chr7:100338176-100350158	4	+	100338176	100338176	16724991	4	88,117,104,442,	0,596,7688,11540,
#Partially deleted in new
chr7	100338196	100338886	chr7:100338196-100338886	5	+	100338196	100338196	16724991	2	64,115,	0,575,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	100351255	100358292	chr7:100351255-100358292	0	+	100351255	100351255	8553170	5	155,93,98,134,73,	0,2664,3887,5494,6964,
#Partially deleted in new
chr7	100352175	100367733	chr7:100352175-100367733	3	+	100358302	100367377	0	9	303,351,127,61,134,147,390,201,385,	0,388,821,1034,4574,6044,6514,7161,15173,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	100352267	100358015	chr7:100352267-100358015	0	+	100352267	100352267	8553170	5	211,560,61,640,2873,	0,296,942,1105,2875,
#Partially deleted in new
chr7	100352281	100359008	chr7:100352281-100359008	0	+	100358302	100359008	789624	9	197,351,127,61,640,98,134,147,319,	0,282,715,928,1091,2861,4468,5938,6408,
#Partially deleted in new
chr7	100352287	100367733	chr7:100352287-100367733	1	+	100356600	100367352	0	9	191,560,61,98,490,147,181,201,385,	0,276,922,2855,4106,5932,6611,7049,15061,
#Partially deleted in new
chr7	100352345	100359008	chr7:100352345-100359008	0	+	100358302	100359008	789624	11	133,104,154,127,61,111,118,98,134,147,319,	0,218,415,651,864,1027,1549,2797,4404,5874,6344,
#Partially deleted in new
chr7	100352345	100359008	chr7:100352345-100359008	0	+	100358302	100359008	789624	10	133,351,127,61,111,118,98,134,147,319,	0,218,651,864,1027,1549,2797,4404,5874,6344,
#Partially deleted in new
chr7	100352345	100359008	chr7:100352345-100359008	0	+	100358302	100359008	789624	9	133,351,127,61,640,98,189,147,76,	0,218,651,864,1027,2797,4404,5874,6587,
#Partially deleted in new
chr7	100352345	100359008	chr7:100352345-100359008	0	+	100358302	100359008	789624	7	133,351,127,98,189,147,319,	0,218,651,2797,4404,5874,6344,
#Deleted in new
chr7	100352359	100353692	chr7:100352359-100353692	7	+	100352359	100352359	16724991	5	119,351,127,61,320,	0,204,637,850,1013,
#Partially deleted in new
chr7	100353028	100358259	chr7:100353028-100358259	0	+	100356600	100358259	789624	6	95,61,118,98,490,40,	0,181,866,2114,3365,5191,
#Partially deleted in new
chr7	100353735	100359014	chr7:100353735-100359014	0	+	100358302	100359014	789624	5	277,98,134,147,116,	0,1407,3014,4484,5163,
#Deleted in new
chr7	100356650	100356721	chr7:100356650-100356721	3	+	100356650	100356650	5263520	1	71,	0,
#Partially deleted in new
chr7	100356749	100359039	chr7:100356749-100359039	0	+	100358302	100359039	789624	3	134,103,350,	0,1514,1940,
#Partially deleted in new
chr7	100357379	100358989	chr7:100357379-100358989	0	+	100358302	100358989	789624	3	156,147,300,	0,840,1310,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	100358014	100367398	chr7:100358014-100367398	1	+	100358302	100367377	0	4	352,390,201,50,	0,675,1322,9334,
#Partially deleted in new
chr7	100367529	100399302	chr7:100367529-100399302	0	+	100373656	100399302	789624	5	88,140,390,34,12,	0,6051,6514,30349,31761,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	100373444	100400099	chr7:100373444-100400099	3	+	100373656	100399907	0	7	276,390,219,34,50,32,315,	0,599,16443,24434,25846,26136,26340,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	100373457	100400096	chr7:100373457-100400096	1	+	100373656	100399933	789624	6	263,390,34,50,32,274,	0,586,24421,25833,26123,26365,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	100373527	100400096	chr7:100373527-100400096	1	+	100373656	100399907	0	6	193,390,34,50,32,312,	0,516,24351,25763,26053,26257,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	100373527	100400028	chr7:100373527-100400028	1	+	100373656	100399604	0	5	193,390,50,32,244,	0,516,25763,26053,26257,
#Deleted in new
chr7	100373527	100374742	chr7:100373527-100374742	0	+	100373527	100373527	8553170	2	193,699,	0,516,
#Partially deleted in new
chr7	100374043	100376413	chr7:100374043-100376413	0	+	100374043	100374043	8553170	2	390,293,	0,2077,
#Partially deleted in new
chr7	100400825	100402043	chr7:100400825-100402043	0	-	100400825	100400825	8553170	2	511,155,	0,1063,
#Partially deleted in new
chr7	100400852	100428679	chr7:100400852-100428679	3	-	100401013	100420649	0	18	484,153,61,92,67,81,105,76,121,117,120,152,118,79,254,57,107,112,	0,1036,1663,2841,3325,4160,5841,6375,7686,8575,15122,15452,16213,18258,18777,19769,24177,27715,
#Partially deleted in new
chr7	100400854	100419877	chr7:100400854-100419877	1	-	100401013	100417181	0	14	482,61,92,67,81,105,76,121,117,123,152,118,188,248,	0,1661,2839,3323,4158,5839,6373,7684,8573,15120,15450,16211,18147,18775,
#Partially deleted in new
chr7	100400872	100428664	chr7:100400872-100428664	1	-	100401174	100420649	0	16	464,92,67,81,105,76,121,117,123,152,118,79,254,57,107,97,	0,2821,3305,4140,5821,6355,7666,8555,15102,15432,16193,18238,18757,19749,24157,27695,
#Partially deleted in new
chr7	100400872	100417421	chr7:100400872-100417421	0	-	100400872	100400872	8553170	11	464,92,67,81,105,76,121,117,123,152,356,	0,2821,3305,4140,5821,6355,7666,8555,15102,15432,16193,
#Partially deleted in new
chr7	100401093	100409545	chr7:100401093-100409545	0	-	100401174	100409545	789624	7	243,92,67,105,76,121,118,	0,2600,3084,5600,6134,7445,8334,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	100418732	100428992	chr7:100418732-100428992	0	-	100418732	100418732	8553170	5	457,254,57,107,425,	0,897,1889,6297,9835,
#Partially deleted in new
chr7	100419145	100428792	chr7:100419145-100428792	0	-	100419145	100419700	789624	5	44,184,57,107,225,	0,484,1476,5884,9422,
#Partially deleted in new
chr7	100428789	100431579	chr7:100428789-100431579	0	+	100428789	100428789	8553170	2	116,550,	0,2240,
#Partially deleted in new
chr7	100428816	100434117	chr7:100428816-100434117	1	+	100431425	100433554	0	5	224,1075,219,127,616,	0,1798,4102,4446,4685,
#Partially deleted in new
chr7	100429374	100431482	chr7:100429374-100431482	0	+	100429374	100429374	8553170	2	139,453,	0,1655,
#Partially deleted in new
chr7	100429630	100434126	chr7:100429630-100434126	3	+	100430018	100433554	0	4	2059,219,127,625,	0,3288,3632,3871,
#Partially deleted in new
chr7	100435256	100436510	chr7:100435256-100436510	3	+	100435256	100435256	8553170	2	205,128,	0,1126,
#Partially deleted in new
chr7	100435281	100436565	chr7:100435281-100436565	3	-	100435359	100436374	789624	4	252,137,217,425,	0,349,566,859,
#Partially deleted in new
chr7	100435281	100436136	chr7:100435281-100436136	0	-	100435281	100435281	8553170	2	252,506,	0,349,
#Partially deleted in new
chr7	100435281	100436423	chr7:100435281-100436423	0	-	100435281	100435281	8553170	3	252,137,576,	0,349,566,
#Partially deleted in new
chr7	100435282	100436070	chr7:100435282-100436070	0	-	100435282	100435282	8553170	2	251,223,	0,565,
#Partially deleted in new
chr7	100435358	100436473	chr7:100435358-100436473	0	-	100435358	100435358	8553170	3	175,434,333,	0,272,782,
#Partially deleted in new
chr7	100436203	100438504	chr7:100436203-100438504	3	+	100436203	100436203	8553170	2	179,124,	0,2177,
#Partially deleted in new
chr7	100456614	100464271	chr7:100456614-100464271	3	-	100456751	100464025	789624	3	371,324,309,	0,6748,7348,
#Partially deleted in new
chr7	100456923	100463873	chr7:100456923-100463873	0	-	100456923	100463873	789624	2	62,511,	0,6439,
#Partially deleted in new
chr7	100463358	100477502	chr7:100463358-100477502	0	-	100463358	100463358	8553170	5	328,67,49,167,226,	0,604,4193,10915,13918,
#Partially deleted in new
chr7	100466518	100479279	chr7:100466518-100479279	3	-	100466958	100478038	789624	5	650,49,167,1031,486,	0,1033,7755,10758,12275,
#Deleted in new
chr7	100466522	100468070	chr7:100466522-100468070	0	-	100466958	100468070	789624	3	646,49,376,	0,1029,1172,
#Partially deleted in new
chr7	100466537	100479232	chr7:100466537-100479232	1	-	100466958	100477321	789624	5	631,49,167,183,439,	0,1014,7736,10739,12256,
#Deleted in new
chr7	100467165	100468076	chr7:100467165-100468076	0	-	100467165	100468076	789624	3	72,49,382,	0,386,529,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	100473787	100479169	chr7:100473787-100479169	0	-	100473787	100473787	8553170	3	653,1031,376,	0,3489,5006,
#Partially deleted in new
chr7	100483926	100494799	chr7:100483926-100494799	3	+	100485311	100493903	789624	7	75,152,362,1515,213,110,1154,	0,1301,2894,4225,6590,7059,9719,
#Partially deleted in new
chr7	100486923	100494322	chr7:100486923-100494322	1	+	100486923	100493903	789624	5	259,1515,216,110,677,	0,1228,3590,4062,6722,
#Partially deleted in new
chr7	100490514	100494116	chr7:100490514-100494116	0	+	100490514	100490514	8553170	3	215,110,471,	0,471,3131,
#Partially deleted in new
chr7	100490983	100494086	chr7:100490983-100494086	0	+	100490983	100490983	8553170	2	112,441,	0,2662,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	100509716	100519926	chr7:100509716-100519926	3	+	100509716	100509716	8553170	5	85,155,164,123,43,	0,1265,6876,9659,10167,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	100530361	100530659	chr7:100530361-100530659	3	-	100530361	100530361	8553170	1	298,	0,
#Partially deleted in new
chr7	100539210	100562874	chr7:100539210-100562874	0	+	100539346	100555646	789624	7	357,94,116,126,121,89,12,	0,9611,11185,16399,23048,23383,23652,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	100539211	100556370	chr7:100539211-100556370	0	+	100539211	100539211	8553170	4	356,94,116,761,	0,9610,11184,16398,
#Partially deleted in new
chr7	100539224	100568219	chr7:100539224-100568219	3	+	100539346	100564991	789624	12	343,94,116,154,166,126,121,89,84,129,86,3288,	0,9597,11171,14122,14868,16385,23034,23369,23638,24609,24993,25707,
#Partially deleted in new
chr7	100550425	100565961	chr7:100550425-100565961	0	+	100550425	100550425	8553170	9	86,154,166,126,121,89,58,34,1030,	0,2921,3667,5184,11833,12168,12437,13844,14506,
#Partially deleted in new
chr7	100555666	100565248	chr7:100555666-100565248	0	+	100555666	100564991	789624	8	69,33,121,89,84,129,86,317,	0,927,6592,6927,7196,8167,8551,9265,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	100570130	100571136	chr7:100570130-100571136	7	+	100570130	100570130	16724991	1	1006,	0,
#Deleted in new
chr7	100572227	100573647	chr7:100572227-100573647	3	-	100572286	100573168	789624	6	344,98,154,107,83,51,	0,426,632,878,1069,1369,
#Deleted in new
chr7	100572227	100573820	chr7:100572227-100573820	1	-	100572286	100573742	789624	6	344,98,154,107,104,224,	0,426,632,878,1069,1369,
#Partially deleted in new
chr7	100572231	100578700	chr7:100572231-100578700	3	-	100572231	100572231	8553170	16	340,98,154,107,2486,138,86,312,69,117,62,77,91,100,113,51,	0,422,628,874,1065,3639,4006,4462,4854,5041,5265,5432,5590,5927,6167,6418,
#Deleted in new
chr7	100572255	100573608	chr7:100572255-100573608	1	-	100572286	100573168	789624	5	316,98,154,107,312,	0,398,604,850,1041,
#Deleted in new
chr7	100572316	100573066	chr7:100572316-100573066	0	-	100572316	100572316	8553170	2	255,413,	0,337,
#Partially deleted in new
chr7	100574010	100576943	chr7:100574010-100576943	0	-	100574251	100576943	789624	6	346,78,138,86,84,42,	0,1694,1860,2227,2683,2891,
#Partially deleted in new
chr7	100574659	100586153	chr7:100574659-100586153	3	-	100575106	100586100	789624	18	645,78,138,86,84,104,69,117,62,77,91,100,113,137,106,127,145,273,	0,1045,1211,1578,2034,2242,2426,2613,2837,3004,3162,3499,3739,3990,7117,7381,7655,11221,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	100574659	100580873	chr7:100574659-100580873	0	-	100574659	100574659	8553170	9	645,78,138,86,312,304,62,77,3052,	0,1045,1211,1578,2034,2426,2837,3004,3162,
#Partially deleted in new
chr7	100574659	100582350	chr7:100574659-100582350	1	-	100575106	100576255	789624	18	645,78,75,15,45,86,84,104,117,62,77,91,100,113,137,106,127,36,	0,1045,1211,1288,1304,1578,2034,2242,2613,2837,3004,3162,3499,3739,3990,7117,7381,7655,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	100574708	100577100	chr7:100574708-100577100	0	-	100574708	100574708	8553170	4	596,78,138,863,	0,996,1162,1529,
#Partially deleted in new
chr7	100575062	100585120	chr7:100575062-100585120	1	-	100575106	100577093	789624	18	242,78,138,86,84,104,69,117,62,77,91,100,113,137,106,127,145,138,	0,642,808,1175,1631,1839,2023,2210,2434,2601,2759,3096,3336,3587,6714,6978,7252,9920,
#Partially deleted in new
chr7	100575956	100577095	chr7:100575956-100577095	0	-	100575956	100575956	8553170	3	52,86,402,	0,281,737,
#Deleted in new
chr7	100576984	100577884	chr7:100576984-100577884	0	-	100576984	100576984	8553170	2	756,63,	0,837,
#Deleted in new
chr7	100577845	100578739	chr7:100577845-100578739	0	-	100577845	100577845	8553170	2	666,90,	0,804,
#Deleted in new
chr7	100581636	100582453	chr7:100581636-100582453	0	-	100581636	100581636	8553170	2	246,413,	0,404,
#Deleted in new
chr7	100582137	100586129	chr7:100582137-100586129	0	-	100582137	100582137	8553170	2	322,249,	0,3743,
#Partially deleted in new
chr7	100583981	100590357	chr7:100583981-100590357	0	+	100584188	100590357	789624	4	219,96,99,184,	0,708,5995,6192,
#Partially deleted in new
chr7	100585231	100591846	chr7:100585231-100591846	0	+	100585231	100585231	8553170	4	80,99,184,180,	0,4745,4942,6435,
#Partially deleted in new
chr7	100586303	100601110	chr7:100586303-100601110	1	+	100586625	100600899	789624	10	361,99,184,236,235,159,122,132,171,577,	0,3673,3870,5363,6479,8079,8798,9271,13727,14230,
#Partially deleted in new
chr7	100586345	100601117	chr7:100586345-100601117	0	+	100586625	100591741	789624	7	319,236,78,159,122,132,584,	0,5321,6437,8037,8756,9229,14188,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	100586387	100592932	chr7:100586387-100592932	0	+	100586387	100586387	8553170	5	277,99,184,620,150,	0,3589,3786,5279,6395,
#Partially deleted in new
chr7	100586625	100595621	chr7:100586625-100595621	1	+	100586625	100595621	789624	7	39,99,142,236,235,159,47,	0,3351,3548,5041,6157,7757,8949,
#Partially deleted in new
chr7	100586679	100591892	chr7:100586679-100591892	0	+	100586695	100591892	789624	4	70,99,184,226,	0,3297,3494,4987,
#Partially deleted in new
chr7	100589401	100604038	chr7:100589401-100604038	3	-	100589401	100589401	789624	9	681,102,250,132,150,130,64,827,201,	0,828,3423,10269,10638,11321,12218,12938,14436,
#Partially deleted in new
chr7	100589572	100601025	chr7:100589572-100601025	1	+	100589640	100600899	789624	10	71,99,184,236,235,159,122,132,171,492,	0,404,601,2094,3210,4810,5529,6002,10458,10961,
#Partially deleted in new
chr7	100589628	100601117	chr7:100589628-100601117	3	+	100589640	100600899	789624	10	165,99,184,236,235,159,122,132,171,584,	0,348,545,2038,3154,4754,5473,5946,10402,10905,
#Partially deleted in new
chr7	100602176	100608175	chr7:100602176-100608175	3	+	100602456	100608103	0	9	375,109,259,125,137,215,72,171,239,	0,1253,1782,2914,3499,4239,5275,5460,5760,
#Deleted in new
chr7	100602402	100604905	chr7:100602402-100604905	0	+	100602402	100602402	8553170	4	149,109,259,478,	0,1027,1556,2025,
#Deleted in new
chr7	100602913	100604206	chr7:100602913-100604206	0	-	100602913	100602913	8553170	2	253,203,	0,1090,
#Deleted in new
chr7	100603162	100604136	chr7:100603162-100604136	0	+	100603162	100603162	8553170	2	376,178,	0,796,
#Deleted in new
chr7	100603785	100605232	chr7:100603785-100605232	0	+	100603785	100603785	8553170	2	403,142,	0,1305,
#Deleted in new
chr7	100604031	100605590	chr7:100604031-100605590	0	+	100604031	100604031	8553170	2	186,500,	0,1059,
#Deleted in new
chr7	100604437	100605566	chr7:100604437-100605566	0	+	100604437	100604437	8553170	2	65,476,	0,653,
#Deleted in new
chr7	100604816	100605552	chr7:100604816-100605552	0	+	100604816	100604816	8553170	2	399,48,	0,688,
#Deleted in new
chr7	100604987	100605765	chr7:100604987-100605765	0	+	100604987	100604987	8553170	2	228,90,	0,688,
#Partially deleted in new
chr7	100605152	100607743	chr7:100605152-100607743	0	+	100605152	100605152	8553170	5	63,308,215,72,107,	0,352,1263,2299,2484,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	100606148	100608171	chr7:100606148-100608171	0	+	100606148	100606148	8553170	4	482,72,171,235,	0,1303,1488,1788,
#Partially deleted in new
chr7	100612101	100615326	chr7:100612101-100615326	3	+	100612791	100615183	789624	6	140,267,76,230,165,175,	0,628,1092,1375,2765,3050,
#Partially deleted in new
chr7	100612157	100615384	chr7:100612157-100615384	0	+	100612791	100613481	789624	5	84,267,230,165,233,	0,572,1319,2709,2994,
#Deleted in new
chr7	100612183	100613704	chr7:100612183-100613704	0	+	100612183	100612183	8553170	3	58,540,228,	0,546,1293,
#Partially deleted in new
chr7	100612371	100615032	chr7:100612371-100615032	0	+	100612791	100615032	789624	5	114,267,76,230,166,	0,358,822,1105,2495,
#Partially deleted in new
chr7	100612429	100615373	chr7:100612429-100615373	1	+	100612791	100615183	789624	6	56,267,76,230,165,222,	0,300,764,1047,2437,2722,
#Partially deleted in new
chr7	100612509	100615384	chr7:100612509-100615384	1	+	100612791	100615183	789624	5	487,76,230,165,233,	0,684,967,2357,2642,
#Partially deleted in new
chr7	100612555	100615384	chr7:100612555-100615384	1	+	100612791	100615183	789624	5	441,76,200,165,233,	0,638,951,2311,2596,
#Deleted in new
chr7	100612814	100613789	chr7:100612814-100613789	0	+	100612814	100612814	8553170	3	182,76,313,	0,379,662,
#Partially deleted in new
chr7	100620415	100641550	chr7:100620415-100641550	1	-	100620856	100641509	789624	18	711,141,228,85,77,68,64,83,120,164,140,117,123,112,141,187,253,74,	0,6347,6848,7161,7328,7491,7657,7808,8837,10473,11390,11666,12585,12813,13000,20270,20560,21061,
#Partially deleted in new
chr7	100620415	100641550	chr7:100620415-100641550	1	-	100629317	100641509	789624	16	711,141,228,85,77,68,64,83,120,164,123,112,141,187,253,74,	0,6347,6848,7161,7328,7491,7657,7808,8837,10473,12585,12813,13000,20270,20560,21061,
#Partially deleted in new
chr7	100620419	100642721	chr7:100620419-100642721	3	-	100620856	100641509	789624	19	707,141,228,85,77,68,64,83,120,164,140,117,123,112,141,187,253,290,31,	0,6343,6844,7157,7324,7487,7653,7804,8833,10469,11386,11662,12581,12809,12996,20266,20556,21057,22271,
#Partially deleted in new
chr7	100620419	100641514	chr7:100620419-100641514	0	-	100620419	100620419	8553170	14	707,141,398,77,68,234,120,164,123,112,141,187,253,38,	0,6343,6844,7324,7487,7653,8833,10469,12581,12809,12996,20266,20556,21057,
#Partially deleted in new
chr7	100620454	100633090	chr7:100620454-100633090	0	-	100620454	100620454	8553170	8	672,141,398,77,68,234,164,90,	0,6308,6809,7289,7452,7618,10434,12546,
#Partially deleted in new
chr7	100620462	100633650	chr7:100620462-100633650	0	-	100620462	100620462	8553170	15	664,141,228,85,77,68,64,83,120,164,140,117,123,112,235,	0,6300,6801,7114,7281,7444,7610,7761,8790,10426,11343,11619,12538,12766,12953,
#Deleted in new
chr7	100626552	100627604	chr7:100626552-100627604	0	-	100626552	100626552	8553170	2	351,341,	0,711,
#Partially deleted in new
chr7	100627440	100633404	chr7:100627440-100633404	0	-	100627440	100627440	8553170	9	51,85,77,68,64,83,164,123,176,	0,136,303,466,632,783,3448,5560,5788,
#Partially deleted in new
chr7	100627601	100632060	chr7:100627601-100632060	0	-	100627601	100627601	8553170	7	60,77,68,64,83,164,255,	0,142,305,471,622,3287,4204,
#Partially deleted in new
chr7	100630984	100633408	chr7:100630984-100633408	0	-	100630984	100630984	8553170	5	68,140,117,123,180,	0,821,1097,2016,2244,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	100632768	100633558	chr7:100632768-100633558	0	-	100632768	100632768	8553170	3	355,112,143,	0,460,647,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	100639802	100642779	chr7:100639802-100642779	0	-	100639802	100639802	8553170	4	1070,253,102,89,	0,1173,1674,2888,
#Partially deleted in new
chr7	100643096	100656461	chr7:100643096-100656461	3	-	100643245	100656354	789624	14	230,87,96,81,115,62,90,107,95,98,101,166,77,132,	0,3152,3454,3654,3874,4126,4347,5459,5632,6941,11922,12324,12706,13233,
#Partially deleted in new
chr7	100643141	100647738	chr7:100643141-100647738	0	-	100643141	100643141	8553170	7	185,87,96,81,141,62,295,	0,3107,3409,3609,3829,4081,4302,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	100648227	100656435	chr7:100648227-100656435	0	-	100648227	100648227	8553170	7	435,95,98,101,166,77,106,	0,501,1810,6791,7193,7575,8102,
#Partially deleted in new
chr7	100648728	100656366	chr7:100648728-100656366	0	-	100648728	100648728	8553170	5	95,98,101,459,37,	0,1309,6290,6692,7601,
#Partially deleted in new
chr7	100649960	100655453	chr7:100649960-100655453	0	-	100649960	100649960	8553170	3	175,101,33,	0,5058,5460,
#Partially deleted in new
chr7	100650062	100656433	chr7:100650062-100656433	0	-	100650062	100655445	789624	4	73,101,166,104,	0,4956,5358,6267,
#Partially deleted in new
chr7	100673530	100679174	chr7:100673530-100679174	3	+	100676265	100678801	789624	10	393,146,39,107,64,163,67,202,217,480,	0,2646,3004,3162,3821,3967,4221,4567,4867,5164,
#Partially deleted in new
chr7	100673566	100678452	chr7:100673566-100678452	0	+	100676265	100678452	789624	9	44,146,39,107,64,163,67,202,55,	0,2610,2968,3126,3785,3931,4185,4531,4831,
#Partially deleted in new
chr7	100673744	100679148	chr7:100673744-100679148	1	+	100676728	100678801	789624	9	179,26,107,64,163,67,202,217,454,	0,2803,2948,3607,3753,4007,4353,4653,4950,
#Partially deleted in new
chr7	100673748	100679138	chr7:100673748-100679138	1	+	100676728	100678801	789624	9	175,39,107,64,163,67,202,217,444,	0,2786,2944,3603,3749,4003,4349,4649,4946,
#Partially deleted in new
chr7	100673822	100679165	chr7:100673822-100679165	1	+	100677530	100678801	789624	7	101,64,163,67,202,217,471,	0,3529,3675,3929,4275,4575,4872,
#Partially deleted in new
chr7	100673877	100679145	chr7:100673877-100679145	1	+	100677530	100678801	789624	6	46,163,67,202,217,451,	0,3620,3874,4220,4520,4817,
#Partially deleted in new
chr7	100675285	100679174	chr7:100675285-100679174	1	+	100676265	100678801	789624	10	156,146,39,107,64,163,67,202,217,480,	0,891,1249,1407,2066,2212,2466,2812,3112,3409,
#Partially deleted in new
chr7	100675726	100678297	chr7:100675726-100678297	0	+	100676265	100678297	789624	8	124,146,39,107,64,163,67,200,	0,450,808,966,1625,1771,2025,2371,
#Partially deleted in new
chr7	100676120	100677777	chr7:100676120-100677777	0	+	100676265	100677777	789624	7	56,90,39,107,64,163,26,	0,112,414,572,1231,1377,1631,
#Partially deleted in new
chr7	100676137	100679174	chr7:100676137-100679174	1	+	100676265	100678801	789624	9	185,39,107,64,163,67,202,217,480,	0,397,555,1214,1360,1614,1960,2260,2557,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	100676222	100677534	chr7:100676222-100677534	0	+	100676222	100676222	8553170	4	100,39,723,37,	0,312,470,1275,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	100676835	100679167	chr7:100676835-100679167	0	+	100676835	100676835	8553170	6	580,163,67,202,217,473,	0,662,916,1262,1562,1859,
#Deleted in new
chr7	100677369	100678810	chr7:100677369-100678810	0	+	100677369	100677369	8553170	5	46,321,202,217,116,	0,128,728,1028,1325,
#Deleted in new
chr7	100679506	100689448	chr7:100679506-100689448	1	-	100681718	100688238	0	24	2265,130,164,161,188,219,141,83,101,138,101,167,172,98,138,106,254,171,41,109,112,96,130,1245,	0,2357,2565,2815,3083,3505,3797,4043,4311,4513,4730,4943,5216,5542,5837,6467,6673,7142,7499,7791,7998,8281,8474,8697,
#Partially deleted in new
chr7	100679506	100693968	chr7:100679506-100693968	3	-	100681718	100688238	0	28	2265,130,164,161,188,219,141,83,101,138,101,167,172,98,138,106,254,171,41,109,112,96,130,104,65,127,254,32,	0,2357,2565,2815,3083,3505,3797,4043,4311,4513,4730,4943,5216,5542,5837,6467,6673,7142,7499,7791,7998,8281,8474,8697,8944,9085,9795,14430,
#Deleted in new
chr7	100683878	100684591	chr7:100683878-100684591	0	-	100683878	100683878	8553170	3	40,318,142,	0,141,571,
#Deleted in new
chr7	100684837	100688238	chr7:100684837-100688238	0	-	100684837	100684837	8553170	6	57,48,112,96,130,35,	0,2521,2667,2950,3143,3366,
#Deleted in new
chr7	100685396	100686759	chr7:100685396-100686759	0	-	100685396	100685396	8553170	3	85,460,111,	0,577,1252,
#Partially deleted in new
chr7	100688597	100694037	chr7:100688597-100694037	0	-	100688597	100688597	8553170	2	121,101,	0,5339,
#Partially deleted in new
chr7	100706052	100707495	chr7:100706052-100707495	3	+	100706830	100707253	0	2	252,675,	0,768,
#Partially deleted in new
chr7	100706335	100707242	chr7:100706335-100707242	0	+	100706830	100707242	789624	2	61,422,	0,485,
#Partially deleted in new
chr7	100720799	100723700	chr7:100720799-100723700	3	+	100720980	100723133	0	5	194,146,87,180,723,	0,758,1162,1864,2178,
#Boundary problem: need 47, got 0, diff 47, mapped 0.0
chr7	100733625	100797797	chr7:100733625-100797797	0	+	100734168	100794142	789624	47	23,195,53,147,272,88,153,165,92,79,147,272,85,1518,185,142,120,125,146,144,111,170,203,142,248,181,112,95,177,209,145,248,165,125,305,212,145,248,130,172,183,140,139,141,100,47,91,	0,401,2094,2857,3183,3636,4835,12912,13924,14511,14698,16999,17556,18086,21600,24576,24905,26095,26765,28589,30180,30401,31726,32899,33384,34205,34984,36254,38218,39659,40095,41702,42043,42814,45820,50997,52371,54263,55592,57316,58340,58779,60494,61570,63740,63951,64081,
#Boundary problem: need 48, got 0, diff 48, mapped 0.0
chr7	100733625	100797797	chr7:100733625-100797797	0	+	100734168	100794138	789624	48	23,195,53,147,272,88,153,165,92,79,147,272,85,1518,185,142,120,125,146,144,111,170,203,142,248,181,112,95,177,209,145,248,165,125,305,212,145,248,130,172,183,140,199,139,141,100,47,91,	0,401,2094,2857,3183,3636,4835,12912,13924,14511,14698,16999,17556,18086,21600,24576,24905,26095,26765,28589,30180,30401,31726,32899,33384,34205,34984,36254,38218,39659,40095,41702,42043,42814,45820,50997,52371,54263,55592,57316,58340,58779,60194,60494,61570,63740,63951,64081,
#Boundary problem: need 47, got 0, diff 47, mapped 0.0
chr7	100733625	100797797	chr7:100733625-100797797	0	+	100734168	100794138	789624	47	23,195,53,147,272,88,153,165,92,79,147,272,85,1518,185,142,120,125,146,144,111,170,203,142,248,181,112,95,177,209,145,248,165,125,305,212,145,248,130,172,183,75,139,141,100,47,91,	0,401,2094,2857,3183,3636,4835,12912,13924,14511,14698,16999,17556,18086,21600,24576,24905,26095,26765,28589,30180,30401,31726,32899,33384,34205,34984,36254,38218,39659,40095,41702,42043,42814,45820,50997,52371,54263,55592,57316,58340,58779,60494,61570,63740,63951,64081,
#Boundary problem: need 48, got 0, diff 48, mapped 0.0
chr7	100733625	100797797	chr7:100733625-100797797	3	+	100734168	100797732	789624	48	23,195,53,147,272,88,153,165,92,79,147,272,85,1518,185,142,120,125,146,144,111,170,203,142,248,181,112,95,177,209,145,248,165,125,305,212,145,248,130,172,183,75,199,139,141,100,47,91,	0,401,2094,2857,3183,3636,4835,12912,13924,14511,14698,16999,17556,18086,21600,24576,24905,26095,26765,28589,30180,30401,31726,32899,33384,34205,34984,36254,38218,39659,40095,41702,42043,42814,45820,50997,52371,54263,55592,57316,58340,58779,60194,60494,61570,63740,63951,64081,
#Boundary problem: need 46, got 0, diff 46, mapped 0.0
chr7	100733625	100797797	chr7:100733625-100797797	1	+	100734168	100797732	789624	46	23,195,53,147,272,88,153,165,92,79,147,272,85,1518,185,142,120,125,146,144,111,170,203,142,248,181,112,95,177,209,145,248,165,125,305,212,145,248,130,172,183,140,141,100,47,91,	0,401,2094,2857,3183,3636,4835,12912,13924,14511,14698,16999,17556,18086,21600,24576,24905,26095,26765,28589,30180,30401,31726,32899,33384,34205,34984,36254,38218,39659,40095,41702,42043,42814,45820,50997,52371,54263,55592,57316,58340,58779,61570,63740,63951,64081,
#Boundary problem: need 47, got 0, diff 47, mapped 0.0
chr7	100733625	100797797	chr7:100733625-100797797	0	+	100733625	100733625	8553170	47	23,195,53,147,272,88,153,165,92,79,147,272,85,1518,185,142,120,125,146,144,111,170,203,142,248,181,112,95,177,209,145,248,165,125,305,212,145,248,130,172,183,140,439,141,100,47,91,	0,401,2094,2857,3183,3636,4835,12912,13924,14511,14698,16999,17556,18086,21600,24576,24905,26095,26765,28589,30180,30401,31726,32899,33384,34205,34984,36254,38218,39659,40095,41702,42043,42814,45820,50997,52371,54263,55592,57316,58340,58779,60194,61570,63740,63951,64081,
#Partially deleted in new
chr7	100734020	100797796	chr7:100734020-100797796	1	+	100734168	100797732	789624	45	201,53,147,272,88,153,165,92,79,147,272,85,1518,185,142,120,125,146,144,111,170,203,142,248,181,112,95,177,209,145,248,165,125,305,212,145,248,130,172,183,140,141,100,47,90,	0,1699,2462,2788,3241,4440,12517,13529,14116,14303,16604,17161,17691,21205,24181,24510,25700,26370,28194,29785,30006,31331,32504,32989,33810,34589,35859,37823,39264,39700,41307,41648,42419,45425,50602,51976,53868,55197,56921,57945,58384,61175,63345,63556,63686,
#Partially deleted in new
chr7	100734020	100797796	chr7:100734020-100797796	1	+	100734168	100797732	789624	47	201,53,147,272,88,153,165,92,79,147,272,85,1518,185,142,120,125,146,144,111,170,203,142,248,181,112,95,177,209,145,248,165,125,305,212,145,248,130,172,183,75,199,139,141,100,47,90,	0,1699,2462,2788,3241,4440,12517,13529,14116,14303,16604,17161,17691,21205,24181,24510,25700,26370,28194,29785,30006,31331,32504,32989,33810,34589,35859,37823,39264,39700,41307,41648,42419,45425,50602,51976,53868,55197,56921,57945,58384,59799,60099,61175,63345,63556,63686,
#Partially deleted in new
chr7	100802564	100827499	chr7:100802564-100827499	3	-	100803460	100827030	0	17	1026,156,194,150,216,248,114,65,103,166,125,333,156,397,288,71,521,	0,2601,2936,3855,4800,10182,10530,11087,11354,14627,15955,16992,17576,19706,21079,21638,24414,
#Partially deleted in new
chr7	100802564	100827115	chr7:100802564-100827115	1	-	100803460	100827030	789624	16	1026,194,150,216,248,114,65,103,166,125,333,156,397,288,71,137,	0,2936,3855,4800,10182,10530,11087,11354,14627,15955,16992,17576,19706,21079,21638,24414,
#Partially deleted in new
chr7	100802564	100827521	chr7:100802564-100827521	1	-	100817244	100827030	0	14	1026,156,194,150,216,248,114,65,103,166,397,288,71,543,	0,2601,2936,3855,4800,10182,10530,11087,11354,14627,19706,21079,21638,24414,
#Partially deleted in new
chr7	100802567	100825526	chr7:100802567-100825526	0	-	100802567	100802567	8553170	16	1023,156,194,150,216,248,114,65,103,166,125,333,156,397,288,1324,	0,2598,2933,3852,4797,10179,10527,11084,11351,14624,15952,16989,17573,19703,21076,21635,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	100805972	100807579	chr7:100805972-100807579	0	-	100805972	100805972	8553170	2	597,215,	0,1392,
#Partially deleted in new
chr7	100806417	100814088	chr7:100806417-100814088	0	-	100806417	100806417	8553170	6	152,216,248,114,65,170,	0,947,6329,6677,7234,7501,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	100807364	100813339	chr7:100807364-100813339	0	-	100807364	100807364	8553170	3	216,248,245,	0,5382,5730,
#Partially deleted in new
chr7	100813988	100827030	chr7:100813988-100827030	0	-	100813988	100813988	8553170	9	33,96,125,333,156,397,288,71,52,	0,3273,4531,5568,6152,8282,9655,10214,12990,
#Partially deleted in new
chr7	100817244	100827030	chr7:100817244-100827030	0	-	100817244	100817244	8553170	5	113,397,288,71,52,	0,5026,6399,6958,9734,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	100818550	100820482	chr7:100818550-100820482	0	-	100818550	100818550	8553170	3	94,333,342,	0,1006,1590,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	100821026	100821264	chr7:100821026-100821264	3	-	100821026	100821026	8553170	1	238,	0,
#Partially deleted in new
chr7	100826819	100859918	chr7:100826819-100859918	0	+	100826819	100826819	8553170	2	228,34,	0,33065,
#Partially deleted in new
chr7	100837313	100852616	chr7:100837313-100852616	3	-	100837313	100837313	789624	2	266,103,	0,15200,
#Partially deleted in new
chr7	100852718	100865538	chr7:100852718-100865538	1	+	100854197	100865324	789624	14	117,223,135,132,309,108,112,158,83,125,193,175,147,252,	0,1437,1901,2987,4149,6116,6331,7166,7431,8419,8673,9018,9962,12568,
#Partially deleted in new
chr7	100852719	100861262	chr7:100852719-100861262	0	+	100858869	100859949	789624	5	120,108,158,83,251,	0,6115,7165,7430,8292,
#Partially deleted in new
chr7	100852732	100861180	chr7:100852732-100861180	0	+	100858869	100861180	789624	7	103,309,108,112,158,83,43,	0,4135,6102,6317,7152,7417,8405,
#Partially deleted in new
chr7	100852736	100865535	chr7:100852736-100865535	1	+	100854197	100865385	789624	12	103,223,309,108,112,158,83,125,193,175,147,176,	0,1419,4131,6098,6313,7148,7413,8401,8655,9000,9944,12623,
#Partially deleted in new
chr7	100852745	100855928	chr7:100852745-100855928	0	+	100852745	100852745	8553170	4	90,223,135,223,	0,1410,1874,2960,
#Partially deleted in new
chr7	100852752	100867008	chr7:100852752-100867008	3	+	100854197	100866605	789624	14	83,223,135,132,309,108,112,158,83,125,193,175,147,1290,	0,1403,1867,2953,4115,6082,6297,7132,7397,8385,8639,8984,9928,12966,
#Partially deleted in new
chr7	100852776	100861230	chr7:100852776-100861230	0	+	100854197	100861230	789624	7	63,223,108,112,158,83,93,	0,1379,6058,6273,7108,7373,8361,
#Partially deleted in new
chr7	100853285	100855775	chr7:100853285-100855775	0	+	100854197	100855775	789624	4	161,223,135,70,	0,870,1334,2420,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	100855440	100867009	chr7:100855440-100867009	0	+	100855440	100855440	8553170	10	1736,108,112,158,83,125,193,175,147,1291,	0,3394,3609,4444,4709,5697,5951,6296,7240,10278,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	100856793	100867009	chr7:100856793-100867009	0	+	100856793	100856793	8553170	9	2149,112,158,83,125,193,175,147,1291,	0,2256,3091,3356,4344,4598,4943,5887,8925,
#Partially deleted in new
chr7	100857029	100860464	chr7:100857029-100860464	0	+	100857029	100857029	8553170	5	147,108,112,158,315,	0,1805,2020,2855,3120,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	100858735	100867009	chr7:100858735-100867009	0	+	100858735	100858735	8553170	4	2849,175,147,1291,	0,3001,3945,6983,
#Partially deleted in new
chr7	100859036	100860944	chr7:100859036-100860944	0	+	100859036	100859036	8553170	4	125,158,83,428,	0,848,1113,1480,
#Partially deleted in new
chr7	100861519	100865555	chr7:100861519-100865555	0	+	100861519	100861519	8553170	4	65,175,147,269,	0,217,1161,3767,
#Partially deleted in new
chr7	100867137	100873454	chr7:100867137-100873454	3	+	100867497	100873303	0	9	469,128,126,372,94,170,179,121,283,	0,723,970,1357,3232,3436,4405,5486,6034,
#Partially deleted in new
chr7	100867386	100870675	chr7:100867386-100870675	0	+	100867497	100868502	0	6	220,78,126,372,94,102,	0,524,721,1108,2983,3187,
#Deleted in new
chr7	100867386	100868141	chr7:100867386-100868141	0	+	100867386	100867386	8553170	2	220,231,	0,524,
#Partially deleted in new
chr7	100867388	100873453	chr7:100867388-100873453	0	+	100867388	100867388	8553170	8	218,78,126,372,374,179,121,282,	0,522,719,1106,2981,4154,5235,5783,
#Partially deleted in new
chr7	100867393	100870643	chr7:100867393-100870643	0	+	100867497	100868502	0	5	213,126,372,94,70,	0,714,1101,2976,3180,
#Partially deleted in new
chr7	100867497	100873303	chr7:100867497-100873303	1	+	100867497	100868502	0	8	109,126,372,94,170,179,121,132,	0,610,997,2872,3076,4045,5126,5674,
#Deleted in new
chr7	100868035	100868107	chr7:100868035-100868107	3	+	100868035	100868035	5263520	1	72,	0,
#Partially deleted in new
chr7	100868295	100870743	chr7:100868295-100870743	0	+	100868295	100868295	8553170	3	571,94,170,	0,2074,2278,
#Partially deleted in new
chr7	100870782	100872833	chr7:100870782-100872833	0	+	100870782	100870782	8553170	3	226,179,210,	0,760,1841,
#Deleted in new
chr7	100875110	100875936	chr7:100875110-100875936	0	+	100875110	100875110	8553170	2	218,364,	0,462,
#Partially deleted in new
chr7	100875125	100888664	chr7:100875125-100888664	1	+	100875590	100888549	0	20	203,140,129,147,189,170,185,99,118,155,62,79,189,174,154,194,157,102,127,191,	0,447,6159,6533,6927,8944,9242,9614,9797,10090,10575,10737,11121,11669,11921,12194,12577,12916,13131,13348,
#Partially deleted in new
chr7	100875125	100888664	chr7:100875125-100888664	1	+	100875590	100888549	0	20	203,140,129,147,189,170,185,99,118,158,62,79,189,174,154,194,157,90,127,191,	0,447,6159,6533,6927,8944,9242,9614,9797,10087,10575,10737,11121,11669,11921,12194,12577,12928,13131,13348,
#Partially deleted in new
chr7	100875162	100881705	chr7:100875162-100881705	0	+	100875590	100880726	789624	5	166,140,74,129,47,	0,410,5533,6122,6496,
#Partially deleted in new
chr7	100875184	100888664	chr7:100875184-100888664	1	+	100875590	100888549	0	20	144,140,129,147,189,170,185,99,118,155,62,79,189,174,154,194,157,90,127,191,	0,388,6100,6474,6868,8885,9183,9555,9738,10031,10516,10678,11062,11610,11862,12135,12518,12869,13072,13289,
#Partially deleted in new
chr7	100875187	100888664	chr7:100875187-100888664	3	+	100875590	100888549	0	20	141,140,129,147,189,170,185,99,118,158,62,79,189,174,154,194,157,102,127,191,	0,385,6097,6471,6865,8882,9180,9552,9735,10025,10513,10675,11059,11607,11859,12132,12515,12854,13069,13286,
#Partially deleted in new
chr7	100875389	100881722	chr7:100875389-100881722	0	+	100875450	100881722	789624	4	64,140,129,64,	0,183,5895,6269,
#Deleted in new
chr7	100881763	100884239	chr7:100881763-100884239	0	+	100881763	100882765	789624	4	42,189,326,170,	0,289,1001,2306,
#Deleted in new
chr7	100882052	100884239	chr7:100882052-100884239	0	+	100882052	100882458	789624	3	189,633,170,	0,405,2017,
#Deleted in new
chr7	100882719	100884552	chr7:100882719-100884552	0	+	100882719	100882719	8553170	3	371,170,185,	0,1350,1648,
#Deleted in new
chr7	100884753	100885587	chr7:100884753-100885587	0	+	100884753	100884753	8553170	3	85,118,372,	0,169,462,
#Deleted in new
chr7	100884991	100888656	chr7:100884991-100888656	0	+	100884991	100888549	789624	12	49,158,62,79,189,174,154,194,157,102,106,183,	0,221,709,871,1255,1803,2055,2328,2711,3050,3286,3482,
#Deleted in new
chr7	100885294	100886824	chr7:100885294-100886824	0	+	100885294	100885766	789624	5	76,74,79,189,30,	0,406,568,952,1500,
#Deleted in new
chr7	100885707	100886185	chr7:100885707-100886185	0	+	100885707	100885707	8553170	2	55,323,	0,155,
#Deleted in new
chr7	100886559	100887200	chr7:100886559-100887200	0	+	100886559	100886559	8553170	2	409,154,	0,487,
#Deleted in new
chr7	100887001	100887496	chr7:100887001-100887496	0	+	100887001	100887001	8553170	2	199,177,	0,318,
#Deleted in new
chr7	100887347	100888373	chr7:100887347-100888373	0	+	100887347	100887347	8553170	3	166,157,332,	0,355,694,
#Deleted in new
chr7	100887702	100888660	chr7:100887702-100888660	0	+	100887702	100888660	789624	3	157,102,187,	0,339,771,
#Deleted in new
chr7	100888034	100888664	chr7:100888034-100888664	0	+	100888034	100888034	8553170	2	349,191,	0,439,
#Deleted in new
chr7	100888722	100889718	chr7:100888722-100889718	3	-	100888842	100889271	789624	1	996,	0,
#Partially deleted in new
chr7	100889993	100895884	chr7:100889993-100895884	1	-	100890213	100894232	0	5	342,170,485,1088,83,	0,1175,2340,3171,5808,
#Partially deleted in new
chr7	100889993	100895886	chr7:100889993-100895886	1	-	100890213	100894232	0	5	342,170,221,1088,85,	0,1175,2340,3171,5808,
#Partially deleted in new
chr7	100889993	100896133	chr7:100889993-100896133	3	-	100890213	100894232	0	5	342,170,485,1088,75,	0,1175,2340,3171,6065,
#Partially deleted in new
chr7	100889994	100895920	chr7:100889994-100895920	1	-	100890957	100894232	0	5	1094,170,485,1088,119,	0,1174,2339,3170,5807,
#Partially deleted in new
chr7	100889996	100894388	chr7:100889996-100894388	1	-	100890213	100894232	0	4	339,170,485,1224,	0,1172,2337,3168,
#Partially deleted in new
chr7	100890210	100894233	chr7:100890210-100894233	0	-	100890210	100894232	789624	2	125,1069,	0,2954,
#Partially deleted in new
chr7	100890210	100894233	chr7:100890210-100894233	0	-	100890210	100894232	789624	3	125,111,1069,	0,2497,2954,
#Partially deleted in new
chr7	100890210	100894233	chr7:100890210-100894233	0	-	100891326	100894232	789624	3	125,170,1069,	0,958,2954,
#Partially deleted in new
chr7	100890210	100894233	chr7:100890210-100894233	0	-	100893862	100894232	789624	5	125,170,310,740,127,	0,958,2123,2954,3896,
#Partially deleted in new
chr7	100890210	100894233	chr7:100890210-100894233	0	-	100891326	100894232	789624	4	125,170,132,1069,	0,958,2476,2954,
#Partially deleted in new
chr7	100890715	100895971	chr7:100890715-100895971	1	-	100890957	100894232	0	5	373,170,485,1091,170,	0,453,1618,2449,5086,
#Partially deleted in new
chr7	100893756	100896974	chr7:100893756-100896974	0	-	100893756	100894232	789624	3	496,142,422,	0,2383,2796,
#Partially deleted in new
chr7	100894148	100896919	chr7:100894148-100896919	0	-	100894148	100896730	789624	2	104,367,	0,2404,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	100906290	100906572	chr7:100906290-100906572	3	-	100906290	100906290	8553170	1	282,	0,
#Partially deleted in new
chr7	100928369	100928540	chr7:100928369-100928540	7	+	100928369	100928369	16724991	1	171,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	100949554	100968346	chr7:100949554-100968346	3	+	100949624	100967162	789624	12	131,8805,186,116,65,149,66,163,174,92,53,1226,	0,2286,11197,13596,14133,15140,15727,16149,16831,17097,17344,17566,
#Partially deleted in new
chr7	100949624	100967308	chr7:100949624-100967308	1	+	100949624	100967162	789624	11	61,8805,186,116,65,149,66,163,92,53,188,	0,2216,11127,13526,14063,15070,15657,16079,17027,17274,17496,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	100957964	100967890	chr7:100957964-100967890	0	+	100957964	100964769	789624	10	2681,186,65,149,66,163,174,92,53,770,	0,2787,5723,6730,7317,7739,8421,8687,8934,9156,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	100963827	100966235	chr7:100963827-100966235	0	-	100963827	100963827	8553170	2	439,1516,	0,892,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	100963827	100968124	chr7:100963827-100968124	3	-	100963827	100963827	8553170	6	391,122,1121,316,77,85,	0,507,892,2541,3513,4212,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	100966237	100967746	chr7:100966237-100967746	0	+	100966237	100966237	8553170	4	322,92,53,626,	0,414,661,883,
#Partially deleted in new
chr7	100969622	101018936	chr7:100969622-101018936	1	+	100969622	101018636	789624	15	67,35,210,138,14935,102,128,65,152,72,163,162,77,89,342,	0,2495,3236,11747,20962,36848,39011,39472,42673,43196,43357,44290,45992,47952,48972,
#Partially deleted in new
chr7	100969622	101018949	chr7:100969622-101018949	3	+	100969622	101018636	789624	12	67,14889,102,128,65,152,72,163,162,77,89,355,	0,21008,36848,39011,39472,42673,43196,43357,44290,45992,47952,48972,
#Partially deleted in new
chr7	101013053	101018834	chr7:101013053-101018834	0	+	101013053	101017608	789624	4	89,162,89,240,	0,859,4521,5541,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	101014319	101017608	chr7:101014319-101017608	3	-	101014319	101014319	789624	3	120,93,194,	0,878,3095,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	101014324	101017601	chr7:101014324-101017601	0	-	101014324	101014324	789624	3	115,70,187,	0,873,3090,
#Deleted in new
chr7	101016877	101018939	chr7:101016877-101018939	0	+	101016877	101016877	8553170	3	68,89,345,	0,697,1717,
#Deleted in new
chr7	101017262	101018936	chr7:101017262-101018936	0	+	101017262	101017262	8553170	3	135,89,342,	0,312,1332,
#Deleted in new
chr7	101017333	101018939	chr7:101017333-101018939	0	+	101017333	101017333	8553170	2	330,345,	0,1261,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	101020071	101058745	chr7:101020071-101058745	3	+	101020135	101058044	789624	13	146,102,12219,132,128,59,152,69,160,162,98,77,743,	0,11048,11529,27912,28773,29252,30412,31541,31731,32914,33267,36122,37931,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	101020071	101058739	chr7:101020071-101058739	0	+	101020135	101051679	789624	12	146,102,12219,132,128,59,69,160,162,98,77,737,	0,11048,11529,27912,28773,29252,31541,31731,32914,33267,36122,37931,
#Partially deleted in new
chr7	101043710	101048277	chr7:101043710-101048277	0	+	101043710	101043710	8553170	2	109,294,	0,4273,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	101052986	101053606	chr7:101052986-101053606	0	+	101052986	101052986	8553170	2	161,268,	0,352,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	101058298	101058567	chr7:101058298-101058567	3	+	101058298	101058298	8553170	1	269,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	101085438	101097967	chr7:101085438-101097967	3	+	101087312	101089580	0	3	133,163,10656,	0,1567,1873,
#Deleted in new
chr7	101086784	101087508	chr7:101086784-101087508	0	+	101087312	101087508	789624	2	384,197,	0,527,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	101089610	101090624	chr7:101089610-101090624	0	+	101089610	101089610	8553170	2	281,454,	0,560,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	101127088	101139266	chr7:101127088-101139266	3	+	101128393	101137442	0	9	156,272,234,195,199,101,87,84,1862,	0,1304,3332,4786,6606,8405,8626,9912,10316,
#Partially deleted in new
chr7	101154399	101161277	chr7:101154399-101161277	3	+	101154514	101160566	0	5	118,179,109,138,759,	0,2194,2977,4659,6119,
#Partially deleted in new
chr7	101154455	101160533	chr7:101154455-101160533	0	+	101154514	101156522	789624	5	62,355,109,138,15,	0,1962,2921,4603,6063,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	101154482	101161596	chr7:101154482-101161596	0	+	101154514	101160566	0	6	35,179,109,138,175,105,	0,2111,2894,4576,6036,7009,
#Partially deleted in new
chr7	101154524	101160537	chr7:101154524-101160537	0	+	101154524	101160537	789624	5	128,179,109,138,19,	0,2069,2852,4534,5994,
#Partially deleted in new
chr7	101154984	101160827	chr7:101154984-101160827	1	+	101156593	101160566	789624	5	44,179,109,138,309,	0,1609,2392,4074,5534,
#Partially deleted in new
chr7	101156673	101159126	chr7:101156673-101159126	0	+	101156673	101156673	8553170	2	99,68,	0,2385,
#Deleted in new
chr7	101159472	101159555	chr7:101159472-101159555	3	+	101159472	101159472	5263520	1	83,	0,
#Deleted in new
chr7	101162508	101165593	chr7:101162508-101165593	3	-	101162995	101164843	789624	2	2355,220,	0,2865,
#Deleted in new
chr7	101162509	101165558	chr7:101162509-101165558	1	-	101162792	101164843	789624	4	386,29,1022,185,	0,1301,1332,2864,
#Deleted in new
chr7	101162515	101165114	chr7:101162515-101165114	1	-	101162995	101164843	789624	2	2348,129,	0,2470,
#Partially deleted in new
chr7	101170492	101180276	chr7:101170492-101180276	3	-	101172078	101174807	789624	4	2159,225,316,235,	0,2803,4003,9549,
#Partially deleted in new
chr7	101171914	101180215	chr7:101171914-101180215	1	-	101172078	101174807	789624	5	737,225,316,40,174,	0,1381,2581,7182,8127,
#Partially deleted in new
chr7	101173363	101179236	chr7:101173363-101179236	0	-	101173363	101174807	789624	3	157,316,140,	0,1132,5733,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	101173699	101180215	chr7:101173699-101180215	1	-	101174468	101174807	789624	2	1112,174,	0,6342,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	101195006	101201021	chr7:101195006-101201021	3	-	101195945	101200854	789624	7	1094,203,175,205,71,108,276,	0,1180,3184,3619,5227,5401,5739,
#Partially deleted in new
chr7	101195896	101200915	chr7:101195896-101200915	1	-	101195922	101200854	789624	6	204,175,205,71,108,170,	0,2294,2729,4337,4511,4849,
#Partially deleted in new
chr7	101195896	101200912	chr7:101195896-101200912	1	-	101196022	101200854	789624	6	493,175,205,71,108,167,	0,2294,2729,4337,4511,4849,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	101200049	101201038	chr7:101200049-101201038	0	-	101200049	101200049	8553170	3	272,108,293,	0,358,696,
#Partially deleted in new
chr7	101201808	101203526	chr7:101201808-101203526	7	-	101201808	101201808	16724991	5	142,171,98,205,128,	0,335,634,1262,1590,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	101203613	101204495	chr7:101203613-101204495	7	-	101203613	101203613	16724991	1	882,	0,
#Partially deleted in new
chr7	101205976	101217673	chr7:101205976-101217673	3	-	101206280	101217274	789624	19	460,126,147,105,69,114,142,126,105,122,126,102,98,64,113,164,137,92,508,	0,802,1601,2876,4116,4354,4555,5614,5869,6276,6553,6865,7130,9112,9931,10186,10433,10718,11189,
#Partially deleted in new
chr7	101205976	101211672	chr7:101205976-101211672	0	-	101206280	101211672	789624	7	460,126,105,69,114,142,82,	0,802,2876,4116,4354,4555,5614,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	101208592	101210439	chr7:101208592-101210439	0	-	101208592	101208592	8553170	2	365,347,	0,1500,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	101209821	101210655	chr7:101209821-101210655	0	-	101209821	101209821	8553170	3	340,114,124,	0,509,710,
#Partially deleted in new
chr7	101210127	101211915	chr7:101210127-101211915	0	-	101211586	101211915	789624	5	34,114,142,176,70,	0,203,404,1413,1718,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	101210355	101211103	chr7:101210355-101211103	0	-	101210355	101210355	8553170	2	89,572,	0,176,
#Partially deleted in new
chr7	101210594	101216020	chr7:101210594-101216020	0	-	101210594	101216020	789624	8	79,126,105,122,102,98,64,113,	0,996,1251,1658,2247,2512,4494,5313,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	101211303	101211937	chr7:101211303-101211937	0	-	101211303	101211303	8553170	2	413,92,	0,542,
#Partially deleted in new
chr7	101211563	101217994	chr7:101211563-101217994	0	-	101211563	101211563	8553170	11	153,105,122,126,363,64,113,164,137,92,146,	0,282,689,966,1278,3525,4344,4599,4846,5131,6285,
#Deleted in new
chr7	101211634	101212976	chr7:101211634-101212976	0	-	101211634	101211634	8553170	3	82,529,135,	0,211,1207,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	101212543	101213555	chr7:101212543-101213555	0	-	101212543	101212543	8553170	3	112,102,449,	0,298,563,
#Partially deleted in new
chr7	101212920	101216546	chr7:101212920-101216546	0	-	101215909	101216546	789624	6	23,98,64,113,130,137,	0,186,2168,2987,3276,3489,
#Deleted in new
chr7	101215907	101216842	chr7:101215907-101216842	0	-	101215907	101215907	8553170	4	113,164,137,148,	0,255,502,787,
#Deleted in new
chr7	101216162	101217994	chr7:101216162-101217994	0	-	101216162	101217969	789624	4	164,137,92,146,	0,247,532,1686,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	101216520	101218420	chr7:101216520-101218420	0	-	101216520	101217274	789624	5	26,92,253,51,141,	0,174,645,1328,1759,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	101217422	101218366	chr7:101217422-101218366	0	-	101217422	101217422	8553170	2	477,87,	0,857,
#Partially deleted in new
chr7	101217667	101224190	chr7:101217667-101224190	3	+	101218195	101223958	789624	5	550,171,80,170,254,	0,4936,5809,6005,6269,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	101218180	101223958	chr7:101218180-101223958	0	+	101218180	101218180	8553170	6	37,3478,171,80,170,22,	0,138,4423,5296,5492,5756,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	101220380	101224190	chr7:101220380-101224190	0	+	101220380	101220380	8553170	4	2394,80,170,254,	0,3096,3292,3556,
#Partially deleted in new
chr7	101232091	101237946	chr7:101232091-101237946	1	-	101232409	101237581	789624	5	424,117,82,165,582,	0,512,741,2186,5273,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	101232091	101238820	chr7:101232091-101238820	3	-	101232409	101237581	789624	6	424,117,82,165,460,883,	0,512,741,2186,5273,5846,
#Partially deleted in new
chr7	101232092	101237946	chr7:101232092-101237946	1	-	101234412	101237581	789624	6	423,117,82,165,140,582,	0,511,740,2185,4654,5272,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	101232404	101237477	chr7:101232404-101237477	0	-	101234075	101237477	789624	6	111,117,82,244,165,113,	0,199,428,1468,1873,4960,
#Partially deleted in new
chr7	101232487	101237769	chr7:101232487-101237769	0	-	101232487	101237581	789624	4	28,117,82,405,	0,116,345,4877,
#Partially deleted in new
chr7	101232603	101237760	chr7:101232603-101237760	0	-	101232603	101237581	789624	4	117,82,96,396,	0,229,1674,4761,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	101233768	101237750	chr7:101233768-101237750	0	-	101233768	101233768	8553170	3	674,140,386,	0,2978,3596,
#Partially deleted in new
chr7	101234337	101237765	chr7:101234337-101237765	0	-	101234337	101234337	8553170	3	105,140,401,	0,2409,3027,
#Partially deleted in new
chr7	101239457	101245075	chr7:101239457-101245075	0	-	101240228	101245004	789624	4	446,106,77,116,	0,684,1372,5502,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	101239551	101241785	chr7:101239551-101241785	0	-	101239551	101239551	8553170	4	352,106,77,196,	0,590,1278,2038,
#Partially deleted in new
chr7	101239593	101252316	chr7:101239593-101252316	1	-	101240158	101251908	789624	4	310,106,77,422,	0,548,1236,12301,
#Partially deleted in new
chr7	101239606	101245048	chr7:101239606-101245048	1	-	101240158	101245004	789624	4	297,106,77,151,	0,535,1223,5291,
#Partially deleted in new
chr7	101239611	101245085	chr7:101239611-101245085	3	-	101239805	101245004	0	5	292,106,77,133,126,	0,530,1218,4395,5348,
#Partially deleted in new
chr7	101239611	101241177	chr7:101239611-101241177	0	-	101239611	101239611	8553170	4	292,106,77,52,	0,530,1218,1514,
#Partially deleted in new
chr7	101239611	101252291	chr7:101239611-101252291	0	-	101240228	101251908	789624	5	292,106,77,133,397,	0,530,1218,4395,12283,
#Partially deleted in new
chr7	101239660	101252133	chr7:101239660-101252133	0	-	101239660	101251908	789624	4	243,77,133,239,	0,1169,4346,12234,
#Partially deleted in new
chr7	101239731	101244731	chr7:101239731-101244731	0	-	101239731	101239731	8553170	4	172,106,77,175,	0,410,1098,4825,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	101269937	101270041	chr7:101269937-101270041	3	-	101269937	101269937	8553170	1	104,	0,
#Deleted in new
chr7	101273321	101273715	chr7:101273321-101273715	7	+	101273321	101273321	16724991	1	394,	0,
#Partially deleted in new
chr7	101287481	101289771	chr7:101287481-101289771	7	-	101287481	101287481	16724991	2	262,83,	0,2207,
#Partially deleted in new
chr7	101299577	101301346	chr7:101299577-101301346	3	+	101299577	101299577	789624	2	289,578,	0,1191,
#Partially deleted in new
chr7	101308345	101310985	chr7:101308345-101310985	3	+	101308345	101308345	8553170	2	203,502,	0,2138,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	101313366	101321823	chr7:101313366-101321823	1	-	101315133	101316517	789624	3	1916,203,153,	0,2973,8304,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	101313693	101321794	chr7:101313693-101321794	0	-	101315133	101321709	789624	6	412,879,203,90,77,124,	0,710,2646,4430,5262,7977,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	101314174	101321776	chr7:101314174-101321776	1	-	101315133	101316517	789624	6	1108,203,90,77,73,106,	0,2165,3949,4781,7252,7496,
#Partially deleted in new
chr7	101314655	101321803	chr7:101314655-101321803	3	-	101315133	101321709	789624	5	627,203,90,77,133,	0,1684,3468,4300,7015,
#Partially deleted in new
chr7	101314752	101321764	chr7:101314752-101321764	1	-	101315133	101316517	789624	4	530,203,90,94,	0,1587,3371,6918,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	101314787	101321790	chr7:101314787-101321790	0	-	101314787	101314787	8553170	4	495,203,909,120,	0,1552,3336,6883,
#Partially deleted in new
chr7	101314794	101321777	chr7:101314794-101321777	1	-	101315133	101321709	789624	4	488,203,77,107,	0,1545,4161,6876,
#Partially deleted in new
chr7	101314877	101321797	chr7:101314877-101321797	0	-	101318988	101321709	789624	5	405,203,90,108,127,	0,1462,3246,4078,6793,
#Partially deleted in new
chr7	101315071	101321823	chr7:101315071-101321823	0	-	101315071	101315071	8553170	3	211,203,153,	0,1268,6599,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	101315492	101321790	chr7:101315492-101321790	0	-	101315492	101315492	8553170	2	1050,120,	0,6178,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	101315824	101321785	chr7:101315824-101321785	0	-	101315824	101315824	8553170	3	718,90,115,	0,2299,5846,
#Partially deleted in new
chr7	101362819	101559024	chr7:101362819-101559024	3	+	101363032	101557530	0	13	371,123,104,62,157,99,153,84,53,36,51,85,1655,	0,57157,84864,170262,177073,181178,182518,184336,186351,188288,190506,192967,194550,
#Partially deleted in new
chr7	101362876	101559024	chr7:101362876-101559024	1	+	101363032	101557530	0	13	314,123,98,62,157,99,153,84,53,36,51,85,1655,	0,57100,84813,170205,177016,181121,182461,184279,186294,188231,190449,192910,194493,
#Partially deleted in new
chr7	101388867	101389080	chr7:101388867-101389080	7	-	101388867	101388867	16724991	1	213,	0,
#Partially deleted in new
chr7	101553202	101557633	chr7:101553202-101557633	0	+	101553202	101553202	8553170	3	174,85,264,	0,2584,4167,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	101562778	101568971	chr7:101562778-101568971	3	-	101562778	101562778	789624	3	309,148,122,	0,3707,6071,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	101565305	101569006	chr7:101565305-101569006	0	-	101565305	101565305	789624	2	1328,157,	0,3544,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	101565316	101568976	chr7:101565316-101568976	1	-	101565316	101565316	789624	2	2164,127,	0,3533,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	101613324	101629296	chr7:101613324-101629296	1	-	101613474	101629118	789624	8	249,49,79,105,76,102,93,256,	0,337,2895,8771,9672,10595,10847,15716,
#Partially deleted in new
chr7	101613474	101627524	chr7:101613474-101627524	3	-	101613474	101627481	789624	7	99,49,79,105,76,93,46,	0,187,2745,8621,9522,10697,14004,
#Partially deleted in new
chr7	101815903	102283958	chr7:101815903-102283958	1	+	101816030	102283090	789624	23	190,111,48,79,138,124,77,67,49,105,183,59,49,97,128,67,113,117,84,57,81,65,938,	0,100211,212194,254435,281460,288432,295794,299303,342656,354542,362571,373909,377938,379603,457462,458340,459343,462045,464133,464900,465936,466808,467117,
#Partially deleted in new
chr7	101815953	102258233	chr7:101815953-102258233	1	+	101816030	102249042	789624	22	140,111,48,79,138,124,77,67,49,105,189,59,49,97,672,845,166,57,303,189,265,9822,	0,100161,212144,254385,281410,288382,295744,299253,342606,354492,362515,373859,377888,379553,380680,385406,388437,389160,411413,418098,423366,432458,
#Partially deleted in new
chr7	101815953	102258233	chr7:101815953-102258233	1	+	101816030	102249042	789624	22	140,111,48,79,138,124,77,67,49,105,189,59,49,97,366,845,166,57,303,189,265,9822,	0,100161,212144,254385,281410,288382,295744,299253,342606,354492,362515,373859,377888,379553,380986,385406,388437,389160,411413,418098,423366,432458,
#Partially deleted in new
chr7	101815959	102112010	chr7:101815959-102112010	0	+	101815959	101815959	8553170	7	134,111,48,79,138,124,313,	0,100155,212138,254379,281404,288376,295738,
#Partially deleted in new
chr7	101816004	102283958	chr7:101816004-102283958	3	+	101816030	102283090	789624	23	89,111,48,79,138,124,77,67,49,105,189,59,49,97,128,67,113,117,84,57,81,65,938,	0,100110,212093,254334,281359,288331,295693,299202,342555,354441,362464,373808,377837,379502,457361,458239,459242,461944,464032,464799,465835,466707,467016,
#Partially deleted in new
chr7	101816007	102283478	chr7:101816007-102283478	1	+	101816030	102283090	789624	22	86,48,79,138,124,77,67,49,105,183,59,49,97,128,67,113,117,84,57,81,65,458,	0,212090,254331,281356,288328,295690,299199,342552,354438,362467,373805,377834,379499,457358,458236,459239,461941,464029,464796,465832,466704,467013,
#Partially deleted in new
chr7	101816007	101916587	chr7:101816007-101916587	0	+	101816007	101816007	8553170	2	86,473,	0,100107,
#Partially deleted in new
chr7	101816007	102283958	chr7:101816007-102283958	1	+	101816030	102283090	789624	23	86,111,48,79,138,124,77,67,49,105,189,59,49,97,128,67,113,117,84,57,81,65,938,	0,100107,212090,254331,281356,288328,295690,299199,342552,354438,362461,373805,377834,379499,457358,458236,459239,461941,464029,464796,465832,466704,467013,
#Partially deleted in new
chr7	101816008	102283957	chr7:101816008-102283957	1	+	101816030	102283090	789624	22	85,111,79,138,124,77,67,49,105,189,59,49,97,128,67,113,117,84,57,81,65,937,	0,100106,254330,281355,288327,295689,299198,342551,354437,362460,373804,377833,379498,457357,458235,459238,461940,464028,464795,465831,466703,467012,
#Partially deleted in new
chr7	101816010	102258233	chr7:101816010-102258233	1	+	101816030	102249042	789624	24	83,111,48,79,138,124,77,67,49,105,189,59,49,97,672,66,102,845,166,57,303,189,265,9822,	0,100104,212087,254328,281353,288325,295687,299196,342549,354435,362458,373802,377831,379496,380623,382791,384060,385349,388380,389103,411356,418041,423309,432401,
#Partially deleted in new
chr7	101816020	102283957	chr7:101816020-102283957	1	+	101816030	102283090	789624	22	73,111,48,79,124,77,67,49,105,189,59,49,97,128,67,113,117,84,57,81,65,937,	0,100094,212077,254318,288315,295677,299186,342539,354425,362448,373792,377821,379486,457345,458223,459226,461928,464016,464783,465819,466691,467000,
#Partially deleted in new
chr7	101817601	102258233	chr7:101817601-102258233	1	+	101817639	102249042	789624	24	68,111,48,79,138,124,77,67,49,105,189,59,49,97,672,66,102,845,166,57,303,189,265,9822,	0,98513,210496,252737,279762,286734,294096,297605,340958,352844,360867,372211,376240,377905,379032,381200,382469,383758,386789,387512,409765,416450,421718,430810,
#Partially deleted in new
chr7	101817633	102258233	chr7:101817633-102258233	1	+	101817639	102249042	789624	24	36,111,48,79,138,124,77,67,49,105,189,59,49,97,672,66,102,845,166,57,303,189,265,9822,	0,98481,210464,252705,279730,286702,294064,297573,340926,352812,360835,372179,376208,377873,379000,381168,382437,383726,386757,387480,409733,416418,421686,430778,
#Partially deleted in new
chr7	101817639	102249042	chr7:101817639-102249042	1	+	101817639	102249042	789624	23	30,111,48,79,138,124,77,67,49,105,189,59,49,97,672,102,845,166,57,303,189,265,631,	0,98475,210458,252699,279724,286696,294058,297567,340920,352806,360829,372173,376202,377867,378994,382431,383720,386751,387474,409727,416412,421680,430772,
#Partially deleted in new
chr7	101817639	102249042	chr7:101817639-102249042	1	+	101817639	102249042	789624	22	30,111,48,79,138,124,77,67,49,105,189,59,49,97,672,845,166,57,303,189,265,631,	0,98475,210458,252699,279724,286696,294058,297567,340920,352806,360829,372173,376202,377867,378994,383720,386751,387474,409727,416412,421680,430772,
#Partially deleted in new
chr7	101817639	102249042	chr7:101817639-102249042	1	+	101817639	102249042	789624	22	30,111,48,79,138,124,77,67,49,105,189,59,49,97,366,845,166,57,303,189,265,631,	0,98475,210458,252699,279724,286696,294058,297567,340920,352806,360829,372173,376202,377867,379300,383720,386751,387474,409727,416412,421680,430772,
#Partially deleted in new
chr7	101818920	102111726	chr7:101818920-102111726	0	+	101818920	101818920	8553170	7	59,111,48,79,138,124,29,	0,97194,209177,251418,278443,285415,292777,
#Partially deleted in new
chr7	101822246	101824729	chr7:101822246-101824729	3	-	101822246	101822246	8553170	2	275,347,	0,2136,
#Partially deleted in new
chr7	101913103	102283957	chr7:101913103-102283957	0	+	101913103	101913103	8553170	23	335,111,48,79,138,124,77,67,49,105,189,59,49,97,128,67,113,117,84,57,81,65,937,	0,3011,114994,157235,184260,191232,198594,202103,245456,257342,265365,276709,280738,282403,360262,361140,362143,364845,366933,367700,368736,369608,369917,
#Partially deleted in new
chr7	101932342	102283912	chr7:101932342-102283912	0	+	101932342	101932342	8553170	22	280,48,79,138,124,77,67,49,105,189,59,49,97,128,67,113,117,84,57,81,65,892,	0,95755,137996,165021,171993,179355,182864,226217,238103,246126,257470,261499,263164,341023,341901,342904,345606,347694,348461,349497,350369,350678,
#Partially deleted in new
chr7	101959389	102104459	chr7:101959389-102104459	0	+	101959389	101959389	8553170	5	212,48,79,138,124,	0,68708,110949,137974,144946,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	101960115	101961894	chr7:101960115-101961894	3	+	101960115	101960115	8553170	1	1779,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	102097477	102125778	chr7:102097477-102125778	0	+	102097477	102125588	789624	5	24,124,77,67,251,	0,6858,14220,17729,28050,
#Partially deleted in new
chr7	102104436	102115670	chr7:102104436-102115670	0	+	102104436	102104436	8553170	3	23,77,464,	0,7261,10770,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	102153354	102154463	chr7:102153354-102154463	3	-	102153354	102153354	8553170	2	702,99,	0,1010,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	102161119	102161337	chr7:102161119-102161337	7	-	102161119	102161119	16724991	3	45,45,123,	0,49,95,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	102186818	102187039	chr7:102186818-102187039	7	-	102186818	102186818	16724991	2	81,138,	0,83,
#Deleted in new
chr7	102194075	102194164	chr7:102194075-102194164	3	-	102194075	102194075	8553170	1	89,	0,
#Deleted in new
chr7	102264705	102264979	chr7:102264705-102264979	7	-	102264705	102264705	16724991	1	274,	0,
#Partially deleted in new
chr7	102274173	102283932	chr7:102274173-102283932	0	+	102274173	102274173	8553170	8	137,113,117,84,57,81,65,912,	0,1073,3775,5863,6630,7666,8538,8847,
#Partially deleted in new
chr7	102285090	102314547	chr7:102285090-102314547	0	+	102285158	102306764	789624	5	168,102,92,92,36,	0,21630,23724,29245,29421,
#Partially deleted in new
chr7	102285154	102321711	chr7:102285154-102321711	3	+	102285158	102321630	789624	9	104,758,102,92,92,171,209,172,413,	0,15367,21566,23660,29181,29357,32032,35176,36144,
#Partially deleted in new
chr7	102286887	102301279	chr7:102286887-102301279	0	+	102300550	102301279	789624	2	207,758,	0,13634,
#Deleted in new
chr7	102293102	102293187	chr7:102293102-102293187	3	+	102293102	102293102	5263520	1	85,	0,
#Partially deleted in new
chr7	102327255	102329530	chr7:102327255-102329530	7	-	102327255	102327255	16724991	3	113,103,115,	0,637,2160,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	102336868	102336970	chr7:102336868-102336970	3	+	102336868	102336868	8553170	1	102,	0,
#Partially deleted in new
chr7	102337315	102339115	chr7:102337315-102339115	7	+	102337315	102337315	16724991	3	87,103,184,	0,264,1616,
#Partially deleted in new
chr7	102347205	102356444	chr7:102347205-102356444	3	-	102348101	102356023	789624	8	16,105,394,86,59,231,219,581,	0,851,1078,3522,4860,5952,7497,8658,
#Partially deleted in new
chr7	102363871	102404625	chr7:102363871-102404625	0	+	102363871	102363871	8553170	6	540,127,111,79,101,28,	0,11951,12340,33748,35676,40726,
#Partially deleted in new
chr7	102363893	102425446	chr7:102363893-102425446	0	+	102363893	102363893	789624	9	518,122,127,111,79,101,86,65,433,	0,2061,11929,12318,33726,35654,40704,43540,61120,
#Partially deleted in new
chr7	102363894	102425449	chr7:102363894-102425449	0	+	102363894	102363894	8553170	9	517,103,127,111,79,101,86,65,436,	0,2079,11928,12317,33725,35653,40703,43539,61119,
#Partially deleted in new
chr7	102363896	102426676	chr7:102363896-102426676	3	+	102396411	102425111	0	10	515,122,127,111,561,79,101,86,65,1663,	0,2058,11926,12315,32080,33723,35651,40701,43537,61117,
#Partially deleted in new
chr7	102364161	102380633	chr7:102364161-102380633	7	+	102364161	102364161	16724991	5	45,59,127,111,149,	0,1856,11661,12050,16323,
#Partially deleted in new
chr7	102364167	102376318	chr7:102364167-102376318	5	+	102364167	102364167	16724991	4	244,59,127,107,	0,1850,11655,12044,
#Partially deleted in new
chr7	102364297	102380631	chr7:102364297-102380631	4	+	102364297	102364297	16724991	5	114,103,127,111,147,	0,1676,11525,11914,16187,
#Partially deleted in new
chr7	102366041	102426666	chr7:102366041-102426666	0	+	102366041	102366041	8553170	8	35,127,111,79,101,86,65,1653,	0,9781,10170,31578,33506,38556,41392,58972,
#Partially deleted in new
chr7	102376218	102425541	chr7:102376218-102425541	1	+	102376288	102425111	789624	5	104,101,86,65,528,	0,23329,28379,31215,48795,
#Partially deleted in new
chr7	102380464	102382737	chr7:102380464-102382737	7	-	102380464	102380464	16724991	3	116,107,115,	0,628,2158,
#Partially deleted in new
chr7	102396362	102426666	chr7:102396362-102426666	1	+	102396411	102425111	0	6	175,79,101,86,65,1653,	0,1257,3185,8235,11071,28651,
#Partially deleted in new
chr7	102404356	102426666	chr7:102404356-102426666	0	+	102404356	102404356	8553170	3	327,65,1653,	0,3077,20657,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	102426817	102434780	chr7:102426817-102434780	3	-	102426817	102426817	8553170	3	325,149,67,	0,3168,7896,
#Partially deleted in new
chr7	102433105	102439047	chr7:102433105-102439047	0	+	102438956	102439047	789624	3	250,109,104,	0,3119,5838,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	102433529	102456821	chr7:102433529-102456821	1	+	102438956	102447052	789624	4	132,132,238,10309,	0,2672,5414,12983,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	102433529	102456821	chr7:102433529-102456821	3	+	102438956	102447052	789624	3	132,238,10309,	0,5414,12983,
#Partially deleted in new
chr7	102433534	102446975	chr7:102433534-102446975	0	+	102438956	102446975	789624	4	127,109,238,463,	0,2690,5409,12978,
#Partially deleted in new
chr7	102433548	102447048	chr7:102433548-102447048	0	+	102433548	102433548	8553170	3	113,109,536,	0,2676,12964,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	102433569	102451609	chr7:102433569-102451609	1	+	102438956	102447052	789624	4	92,104,238,5097,	0,2660,5374,12943,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	102433575	102448716	chr7:102433575-102448716	1	+	102438956	102447052	789624	3	86,238,2204,	0,5368,12937,
#Partially deleted in new
chr7	102433575	102446924	chr7:102433575-102446924	0	+	102438956	102446924	789624	3	86,238,412,	0,5368,12937,
#Partially deleted in new
chr7	102436159	102446579	chr7:102436159-102446579	0	+	102438956	102446579	789624	3	174,238,67,	0,2784,10353,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	102436298	102448732	chr7:102436298-102448732	1	+	102438956	102447052	789624	3	35,238,2220,	0,2645,10214,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	102456237	102464876	chr7:102456237-102464876	3	-	102457393	102464836	789624	3	1744,198,163,	0,3366,8476,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	102456833	102464863	chr7:102456833-102464863	0	-	102459704	102464836	789624	3	1148,107,150,	0,2770,7880,
#Partially deleted in new
chr7	102459396	102464857	chr7:102459396-102464857	0	-	102459396	102459396	8553170	2	405,144,	0,5317,
#Partially deleted in new
chr7	102464928	102473168	chr7:102464928-102473168	3	+	102465080	102473049	789624	15	232,235,117,141,105,126,115,101,208,73,141,92,156,113,260,	0,888,1225,2410,2790,3133,3334,3625,3926,4645,4813,7289,7525,7763,7980,
#Partially deleted in new
chr7	102464955	102468377	chr7:102464955-102468377	0	+	102467362	102468377	789624	7	223,235,117,141,105,126,115,	0,861,1198,2383,2763,3106,3307,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	102465000	102467376	chr7:102465000-102467376	0	+	102465080	102465589	789624	5	160,96,235,117,38,	0,531,816,1153,2338,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	102465022	102473166	chr7:102465022-102473166	0	+	102465022	102465022	8553170	7	156,235,117,141,1344,73,3425,	0,794,1131,2316,2696,4551,4719,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	102465080	102465589	chr7:102465080-102465589	1	+	102465080	102465589	789624	2	80,58,	0,451,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	102465094	102466270	chr7:102465094-102466270	0	+	102465094	102465589	789624	3	66,520,117,	0,437,1059,
#Partially deleted in new
chr7	102465151	102468559	chr7:102465151-102468559	0	+	102465151	102467700	789624	8	9,235,117,141,159,126,115,6,	0,665,1002,2187,2513,2910,3111,3402,
#Deleted in new
chr7	102465741	102465826	chr7:102465741-102465826	3	+	102465741	102465741	5263520	1	85,	0,
#Partially deleted in new
chr7	102467341	102468445	chr7:102467341-102468445	0	+	102467341	102467341	8553170	4	138,105,126,183,	0,377,720,921,
#Partially deleted in new
chr7	102469588	102473168	chr7:102469588-102473168	0	+	102469588	102473049	789624	6	58,141,92,156,113,287,	0,153,2629,2865,3103,3293,
#Partially deleted in new
chr7	102471468	102471531	chr7:102471468-102471531	3	+	102471468	102471468	5263520	1	63,	0,
#Partially deleted in new
chr7	102473117	102478907	chr7:102473117-102478907	3	-	102473648	102478860	0	4	567,175,90,100,	0,1243,3063,5690,
#Partially deleted in new
chr7	102473937	102478906	chr7:102473937-102478906	1	-	102474198	102478860	789624	3	598,90,96,	0,2243,4873,
#Partially deleted in new
chr7	102482444	102493311	chr7:102482444-102493311	0	-	102482444	102482444	8553170	5	1269,65,121,136,196,	0,1380,2594,6018,10671,
#Partially deleted in new
chr7	102483138	102517777	chr7:102483138-102517777	1	-	102483591	102517710	789624	20	575,65,121,136,170,145,138,193,113,65,151,118,95,132,82,130,62,114,57,132,	0,686,1900,5324,9977,10686,11399,11742,12139,13001,13330,13708,17560,17957,20024,23556,26460,27040,28786,34507,
#Partially deleted in new
chr7	102483143	102517781	chr7:102483143-102517781	3	-	102483591	102517710	789624	21	570,65,121,136,138,170,145,138,193,113,65,151,118,95,132,82,130,62,114,57,136,	0,681,1895,5319,7842,9972,10681,11394,11737,12134,12996,13325,13703,17555,17952,20019,23551,26455,27035,28781,34502,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	102483143	102494868	chr7:102483143-102494868	0	-	102483143	102483143	8553170	8	570,65,121,813,212,170,145,331,	0,681,1895,4642,5918,9972,10681,11394,
#Partially deleted in new
chr7	102483170	102494822	chr7:102483170-102494822	0	-	102483170	102483170	8553170	7	543,121,136,138,170,145,285,	0,1868,5292,7815,9945,10654,11367,
#Partially deleted in new
chr7	102483343	102543764	chr7:102483343-102543764	3	-	102511936	102543636	789624	26	370,65,121,136,138,170,145,138,193,113,65,151,118,95,132,82,130,62,114,57,163,121,77,211,162,240,	0,481,1695,5119,7642,9772,10481,11194,11537,11934,12796,13125,13503,17355,17752,19819,23351,26255,26835,28581,41755,56262,56671,57749,58157,60181,
#Partially deleted in new
chr7	102483483	102493311	chr7:102483483-102493311	0	-	102483483	102483483	8553170	5	230,65,121,379,196,	0,341,1555,4736,9632,
#Partially deleted in new
chr7	102483561	102517755	chr7:102483561-102517755	1	-	102483591	102510198	789624	21	152,65,121,136,138,170,145,138,193,113,65,151,118,95,132,82,130,62,114,57,212,	0,263,1477,4901,7424,9554,10263,10976,11319,11716,12578,12907,13285,17137,17534,19601,23133,26037,26617,28363,33982,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	102537917	102572560	chr7:102537917-102572560	2	-	102567847	102572521	789624	7	608,121,77,211,162,1188,89,	0,1688,2097,3175,3583,29079,34554,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	102537917	102572567	chr7:102537917-102572567	0	-	102567847	102572521	789624	8	608,121,77,211,162,1188,90,96,	0,1688,2097,3175,3583,29079,31917,34554,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	102537918	102572539	chr7:102537918-102572539	0	-	102567050	102572521	789624	9	607,121,77,211,162,87,175,90,68,	0,1687,2096,3174,3582,29078,30091,31916,34553,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	102537919	102572649	chr7:102537919-102572649	0	-	102541538	102572521	789624	8	606,121,77,211,162,87,90,178,	0,1686,2095,3173,3581,29077,31915,34552,
#Partially deleted in new
chr7	102538340	102566629	chr7:102538340-102566629	0	-	102538340	102538340	8553170	7	185,121,77,211,162,71,48,	0,1265,1674,2752,3160,6365,28241,
#Partially deleted in new
chr7	102538416	102543849	chr7:102538416-102543849	3	-	102538416	102543636	789624	6	109,121,77,211,162,325,	0,1189,1598,2676,3084,5108,
#Partially deleted in new
chr7	102540058	102566658	chr7:102540058-102566658	0	-	102540058	102540058	8553170	6	33,211,162,173,71,77,	0,1034,1442,3466,4647,26523,
#Partially deleted in new
chr7	102551231	102562069	chr7:102551231-102562069	3	+	102553255	102561175	789624	9	53,581,219,231,59,86,394,105,14,	0,1603,3127,4668,5932,7235,9368,9884,10824,
#Partially deleted in new
chr7	102553255	102561175	chr7:102553255-102561175	1	+	102553255	102561175	789624	7	160,219,231,59,86,394,60,	0,1103,2644,3908,5211,7344,7860,
#Partially deleted in new
chr7	102555808	102562308	chr7:102555808-102562308	1	+	102555952	102561175	789624	6	322,59,86,394,105,253,	0,1355,2658,4791,5307,6247,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	102562655	102572583	chr7:102562655-102572583	1	-	102566992	102572521	789624	3	4428,90,112,	0,7179,9816,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	102565975	102572560	chr7:102565975-102572560	0	-	102565975	102565975	8553170	4	1108,175,90,838,	0,2034,3859,5747,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	102566287	102572580	chr7:102566287-102572580	1	-	102567847	102572521	789624	3	1897,90,109,	0,3547,6184,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	102567483	102572583	chr7:102567483-102572583	0	-	102567483	102567483	8553170	3	701,90,141,	0,2351,4959,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	102569199	102572583	chr7:102569199-102572583	1	-	102569461	102572521	789624	3	344,90,112,	0,635,3272,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	102569304	102572580	chr7:102569304-102572580	0	-	102569304	102569304	8553170	2	620,109,	0,3167,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	102579103	102679295	chr7:102579103-102679295	1	-	102579103	102579103	8553170	2	181,949,	0,99243,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr7	102579645	102616757	chr7:102579645-102616757	3	-	102582770	102616689	789624	21	3247,65,121,136,138,170,145,138,193,113,65,151,118,95,132,82,130,62,114,57,133,	0,3358,4572,7989,10513,12639,13348,14061,14404,14801,15659,15988,16366,20214,20611,22678,26212,29115,29695,31440,36979,
#Partially deleted in new
chr7	102582322	102611591	chr7:102582322-102611591	1	-	102582770	102609360	789624	20	570,65,121,136,138,170,145,138,193,113,65,151,118,95,132,82,130,62,114,506,	0,681,1895,5312,7836,9962,10671,11384,11727,12124,12982,13311,13689,17537,17934,20001,23535,26438,27018,28763,
#Partially deleted in new
chr7	102582324	102616756	chr7:102582324-102616756	1	-	102582770	102616689	789624	20	568,65,121,136,170,145,138,193,113,65,151,118,95,132,82,130,62,114,57,132,	0,679,1893,5310,9960,10669,11382,11725,12122,12980,13309,13687,17535,17932,19999,23533,26436,27016,28761,34300,
#Partially deleted in new
chr7	102582349	102593991	chr7:102582349-102593991	0	-	102582349	102582349	8553170	7	543,121,136,138,170,145,285,	0,1868,5285,7809,9935,10644,11357,
#Partially deleted in new
chr7	102582522	102642869	chr7:102582522-102642869	3	-	102611097	102642741	789624	26	370,65,121,136,138,170,145,138,193,113,65,151,118,95,132,82,130,62,114,57,163,121,77,211,162,240,	0,481,1695,5112,7636,9762,10471,11184,11527,11924,12782,13111,13489,17337,17734,19801,23335,26238,26818,28563,41666,56191,56600,57681,58089,60107,
#Partially deleted in new
chr7	102582690	102616729	chr7:102582690-102616729	1	-	102582770	102609360	789624	21	202,65,121,136,138,170,145,138,193,113,65,151,118,95,132,82,130,62,114,57,207,	0,313,1527,4944,7468,9594,10303,11016,11359,11756,12614,12943,13321,17169,17566,19633,23167,26070,26650,28395,33832,
#Partially deleted in new
chr7	102587341	102616756	chr7:102587341-102616756	0	-	102587341	102587341	8553170	16	429,170,145,138,193,68,65,151,118,95,132,130,62,114,57,132,	0,4943,5652,6365,6708,7150,7963,8292,8670,12518,12915,18516,21419,21999,23744,29283,
#Partially deleted in new
chr7	102587446	102592323	chr7:102587446-102592323	0	-	102587446	102587446	8553170	4	324,212,138,39,	0,787,2712,4838,
#Partially deleted in new
chr7	102592350	102595737	chr7:102592350-102595737	0	-	102592350	102595737	789624	7	104,145,138,193,68,65,104,	0,643,1356,1699,2141,2954,3283,
#Partially deleted in new
chr7	102593713	102594460	chr7:102593713-102594460	0	-	102593713	102593713	8553170	2	131,411,	0,336,
#Partially deleted in new
chr7	102595301	102602396	chr7:102595301-102602396	0	-	102595768	102602396	789624	6	68,151,96,95,132,73,	0,332,710,4558,4955,7022,
#Partially deleted in new
chr7	102595664	102616738	chr7:102595664-102616738	0	-	102595664	102616689	789624	9	120,118,95,132,82,130,62,114,114,	0,347,4195,4592,6659,10193,13096,13676,20960,
#Partially deleted in new
chr7	102599859	102606177	chr7:102599859-102606177	0	-	102599859	102599859	8553170	4	95,132,82,320,	0,397,2464,5998,
#Partially deleted in new
chr7	102602323	102612142	chr7:102602323-102612142	0	-	102602323	102609360	789624	6	82,130,62,114,57,71,	0,3534,6437,7017,8762,9748,
#Partially deleted in new
chr7	102602323	102616692	chr7:102602323-102616692	0	-	102602323	102609360	789624	5	82,62,114,57,170,	0,6437,7017,8762,14199,
#Partially deleted in new
chr7	102608557	102616746	chr7:102608557-102616746	0	-	102608557	102608557	8553170	4	265,114,57,122,	0,783,2528,8067,
#Partially deleted in new
chr7	102609074	102616756	chr7:102609074-102616756	0	-	102609074	102609074	8553170	3	380,57,132,	0,2011,7550,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	102637024	102642791	chr7:102637024-102642791	3	-	102637524	102642741	789624	6	609,121,77,211,162,162,	0,1689,2098,3179,3587,5605,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	102637048	102671641	chr7:102637048-102671641	3	-	102666130	102671601	8553170	9	585,121,77,211,162,87,175,90,90,	0,1665,2074,3155,3563,29028,30041,31866,34503,
#Partially deleted in new
chr7	102650324	102661159	chr7:102650324-102661159	3	+	102652348	102660265	789624	9	53,581,219,231,59,86,394,105,14,	0,1603,3126,4659,5923,7226,9365,9881,10821,
#Partially deleted in new
chr7	102652348	102660265	chr7:102652348-102660265	1	+	102652348	102660265	789624	7	160,219,231,59,86,394,60,	0,1102,2635,3899,5202,7341,7857,
#Partially deleted in new
chr7	102654892	102661398	chr7:102654892-102661398	1	+	102655036	102660265	789624	6	322,59,86,394,105,253,	0,1355,2658,4797,5313,6253,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	102665367	102671629	chr7:102665367-102671629	3	-	102666927	102671601	789624	3	1897,90,78,	0,3547,6184,
#Partially deleted in new
chr7	102681835	102690469	chr7:102681835-102690469	7	-	102681835	102681835	16724991	9	118,65,121,136,170,145,138,193,113,	0,229,1443,4878,6359,7068,7781,8124,8521,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	102748970	102809225	chr7:102748970-102809225	0	+	102749207	102751697	789624	8	666,110,93,139,42,96,135,936,	0,2721,8883,12302,23438,28282,38364,59319,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	102748970	102779810	chr7:102748970-102779810	0	+	102748970	102748970	8553170	7	688,110,93,139,42,96,94,	0,2721,8883,12302,23438,28282,30746,
#Partially deleted in new
chr7	102748977	102787370	chr7:102748977-102787370	0	+	102748977	102748977	8553170	7	66,110,93,139,42,96,36,	0,2714,8876,12295,23431,28275,38357,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	102749009	102809224	chr7:102749009-102809224	0	+	102749207	102751697	789624	8	408,110,93,139,42,96,135,935,	0,2682,8844,12263,23399,28243,38325,59280,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	102749027	102808840	chr7:102749027-102808840	3	+	102749207	102808402	789624	7	390,93,139,42,96,135,551,	0,8826,12245,23381,28225,38307,59262,
#Partially deleted in new
chr7	102749036	102757876	chr7:102749036-102757876	0	+	102749207	102757876	789624	3	622,110,23,	0,2655,8817,
#Partially deleted in new
chr7	102749207	102808402	chr7:102749207-102808402	1	+	102749207	102808402	789624	8	451,110,93,139,42,96,135,113,	0,2484,8646,12065,23201,28045,38127,59082,
#Partially deleted in new
chr7	102749441	102755399	chr7:102749441-102755399	0	+	102749441	102749441	8553170	3	217,110,396,	0,2250,5562,
#Partially deleted in new
chr7	102755145	102755939	chr7:102755145-102755939	7	+	102755145	102755145	16724991	1	794,	0,
#Partially deleted in new
chr7	102813229	103074833	chr7:102813229-103074833	1	-	102813341	103029418	789624	19	302,164,135,127,120,163,118,99,130,101,53,133,96,168,110,149,68,104,138,	0,8810,19610,64237,65101,70075,70338,70984,99856,113044,118651,150303,154792,211833,214219,215370,216121,242414,261466,
#Partially deleted in new
chr7	102813229	103074839	chr7:102813229-103074839	0	-	102822195	103074770	789624	21	302,164,58,84,127,120,163,118,99,130,101,53,133,96,168,110,149,68,91,104,144,	0,8810,9153,41547,64237,65101,70075,70338,70984,99856,113044,118651,150303,154792,211833,214219,215370,216121,241858,242414,261466,
#Partially deleted in new
chr7	102813232	103074568	chr7:102813232-103074568	3	-	102813341	103029418	789624	20	299,164,135,84,127,120,163,118,99,130,101,53,133,96,168,110,149,68,104,323,	0,8807,19607,41544,64234,65098,70072,70335,70981,99853,113041,118648,150300,154789,211830,214216,215367,216118,242411,261013,
#Partially deleted in new
chr7	102813232	103074725	chr7:102813232-103074725	1	-	102813341	103029418	789624	13	299,164,130,101,53,133,96,168,110,149,68,104,30,	0,8807,99853,113041,118648,150300,154789,211830,214216,215367,216118,242411,261463,
#Partially deleted in new
chr7	102813235	103074843	chr7:102813235-103074843	1	-	102822195	103074770	789624	20	296,189,114,127,120,163,118,99,130,101,53,133,96,168,110,149,68,91,104,148,	0,8804,41511,64231,65095,70069,70332,70978,99850,113038,118645,150297,154786,211827,214213,215364,216115,241852,242408,261460,
#Partially deleted in new
chr7	102813237	102816271	chr7:102813237-102816271	0	-	102813237	102813237	8553170	3	294,83,82,	0,1096,2952,
#Partially deleted in new
chr7	102813274	103074725	chr7:102813274-103074725	1	-	102813341	103029418	789624	19	257,164,84,127,120,163,118,99,130,101,53,133,96,168,110,149,68,104,30,	0,8765,41502,64192,65056,70030,70293,70939,99811,112999,118606,150258,154747,211788,214174,215325,216076,242369,261421,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	102834604	102834708	chr7:102834604-102834708	3	+	102834604	102834604	8553170	1	104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	102857449	102857755	chr7:102857449-102857755	3	+	102857449	102857449	8553170	1	306,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	102883571	102973219	chr7:102883571-102973219	0	-	102883571	102883571	8553170	7	114,99,130,101,133,96,70,	0,642,29514,42702,79961,84450,89578,
#Partially deleted in new
chr7	102912990	102944949	chr7:102912990-102944949	3	+	102933913	102944607	789624	4	155,912,156,740,	0,20783,26439,31219,
#Partially deleted in new
chr7	102912999	102933450	chr7:102912999-102933450	0	+	102912999	102912999	8553170	2	146,392,	0,20059,
#Partially deleted in new
chr7	102913004	102944949	chr7:102913004-102944949	1	+	102933913	102942303	789624	5	141,912,156,53,740,	0,20769,26425,29285,31205,
#Partially deleted in new
chr7	102926282	102933735	chr7:102926282-102933735	0	-	102926282	102926282	8553170	3	92,53,415,	0,5598,7038,
#Deleted in new
chr7	102933229	102934226	chr7:102933229-102934226	0	+	102933913	102934226	789624	2	348,453,	0,544,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	102936183	102944670	chr7:102936183-102944670	0	+	102936183	102936183	8553170	4	139,156,53,461,	0,3246,6106,8026,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	102973521	102988856	chr7:102973521-102988856	0	+	102973521	102973521	8553170	4	250,140,200,482,	0,4859,14511,14853,
#Partially deleted in new
chr7	103025196	103074811	chr7:103025196-103074811	0	-	103025196	103074770	789624	7	34,110,149,68,91,104,116,	0,2252,3403,4154,29891,30447,49499,
#Deleted in new
chr7	103030103	103031354	chr7:103030103-103031354	3	+	103030103	103030103	8553170	2	37,296,	0,955,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	103074880	103099764	chr7:103074880-103099764	1	+	103075272	103098553	789624	7	531,105,149,135,177,72,1466,	0,896,8801,11749,17596,22396,23418,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	103074880	103099749	chr7:103074880-103099749	1	+	103075272	103098553	789624	5	531,149,135,177,1451,	0,8801,11749,17596,23418,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	103074880	103099751	chr7:103074880-103099751	1	+	103075272	103098553	789624	6	531,105,149,135,72,1453,	0,896,8801,11749,22396,23418,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	103074880	103099758	chr7:103074880-103099758	3	+	103075272	103098553	789624	6	531,149,135,177,72,1460,	0,8801,11749,17596,22396,23418,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	103074880	103099758	chr7:103074880-103099758	1	+	103075272	103098553	789624	5	531,149,135,72,1460,	0,8801,11749,22396,23418,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	103074880	103099749	chr7:103074880-103099749	1	+	103075272	103098553	789624	4	531,149,135,1451,	0,8801,11749,23418,
#Partially deleted in new
chr7	103074925	103098863	chr7:103074925-103098863	0	+	103075272	103086922	789624	7	486,105,149,135,69,72,565,	0,851,8756,11704,11943,22351,23373,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	103074949	103098645	chr7:103074949-103098645	0	+	103075272	103083694	789624	8	462,27,67,381,135,177,72,347,	0,6932,8116,8732,11680,17527,22327,23349,
#Partially deleted in new
chr7	103075167	103098437	chr7:103075167-103098437	0	+	103075272	103098437	789624	6	244,105,149,33,135,139,	0,609,8514,8862,11462,23131,
#Partially deleted in new
chr7	103086638	103098683	chr7:103086638-103098683	0	+	103086638	103098553	789624	3	126,177,385,	0,5838,11660,
#Deleted in new
chr7	103088663	103089610	chr7:103088663-103089610	7	-	103088663	103088663	16724991	1	947,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	103095726	103098914	chr7:103095726-103098914	0	+	103095726	103095726	8553170	2	1622,616,	0,2572,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	103099775	103149232	chr7:103099775-103149232	3	-	103103428	103128776	0	6	3347,131,115,647,310,422,	0,3648,15284,19801,28707,49035,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	103099775	103115340	chr7:103099775-103115340	0	-	103099775	103099775	8553170	2	3779,281,	0,15284,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	103099777	103149182	chr7:103099777-103149182	1	-	103103428	103128776	0	5	3777,115,647,310,139,	0,15282,19799,28705,49266,
#Partially deleted in new
chr7	103099898	103148888	chr7:103099898-103148888	0	-	103103428	103128776	0	7	1319,72,131,115,647,310,78,	0,3152,3525,15161,19678,28584,48912,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	103102509	103149073	chr7:103102509-103149073	1	-	103103428	103128776	0	5	1045,115,647,310,263,	0,12550,17067,25973,46301,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	103102523	103119766	chr7:103102523-103119766	0	-	103103428	103119766	789624	5	150,72,131,115,190,	0,527,900,12536,17053,
#Partially deleted in new
chr7	103103086	103149560	chr7:103103086-103149560	1	-	103103428	103128776	0	5	468,115,647,310,282,	0,11973,16490,25396,46192,
#Partially deleted in new
chr7	103120145	103149099	chr7:103120145-103149099	0	-	103120145	103128776	789624	3	78,310,177,	0,8337,28777,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	103126789	103148976	chr7:103126789-103148976	0	-	103126789	103126789	8553170	2	2003,166,	0,22021,
#Partially deleted in new
chr7	103128759	103149235	chr7:103128759-103149235	0	-	103128759	103128776	8553170	3	33,144,398,	0,19201,20078,
#Deleted in new
chr7	103141348	103141939	chr7:103141348-103141939	7	-	103141348	103141348	16724991	1	591,	0,
#Deleted in new
chr7	103152006	103152325	chr7:103152006-103152325	7	-	103152006	103152006	16724991	2	33,232,	0,87,
#Deleted in new
chr7	103161946	103162660	chr7:103161946-103162660	3	-	103161946	103161946	8553170	1	714,	0,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr7	103175132	103280278	chr7:103175132-103280278	7	-	103175132	103175132	16724991	24	279,126,100,175,120,25,47,72,102,81,60,166,87,78,100,92,58,94,121,138,1558,25,102,141,	0,8869,10305,20307,22054,23462,35134,37028,38868,41330,49972,51081,58667,59516,62623,65429,67856,79649,82471,96599,98937,102481,103112,105005,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr7	103175132	103280219	chr7:103175132-103280219	5	-	103175132	103175132	16724991	23	279,126,100,175,120,25,47,72,102,81,60,87,78,100,69,92,58,94,121,138,1558,25,387,	0,8869,10305,20307,22054,23462,35134,37028,38868,41330,49972,58667,59516,62623,63670,65429,67856,79649,82471,96599,98937,102481,104700,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr7	103175272	103280410	chr7:103175272-103280410	5	-	103175272	103175272	16724991	23	139,126,100,175,120,25,47,72,102,81,60,87,78,100,92,58,94,121,138,1558,25,102,578,	0,8729,10165,20167,21914,23322,34994,36888,38728,41190,49832,58527,59376,62483,65289,67716,79509,82331,96459,98797,102341,102972,104560,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr7	103175272	103280305	chr7:103175272-103280305	4	-	103175272	103175272	16724991	21	139,100,47,72,102,81,60,87,78,100,92,58,94,121,149,138,1558,25,102,62,168,	0,10165,34994,36888,38728,41190,49832,58527,59376,62483,65289,67716,79509,82331,83171,96459,98797,102341,102972,104560,104865,
#Partially deleted in new
chr7	103175342	103277638	chr7:103175342-103277638	5	-	103175342	103175342	16724991	21	69,126,100,175,120,25,47,72,102,81,60,87,78,100,92,58,94,121,138,88,25,	0,8659,10095,20097,21844,23252,34924,36818,38658,41120,49762,58457,59306,62413,65219,67646,79439,82261,96389,100197,102271,
#Partially deleted in new
chr7	103261999	103262311	chr7:103261999-103262311	7	+	103261999	103261999	16724991	1	312,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	103273091	103280277	chr7:103273091-103280277	4	-	103273091	103273091	16724991	3	2536,25,445,	0,4522,6741,
#Partially deleted in new
chr7	103297421	103313235	chr7:103297421-103313235	3	+	103297459	103312271	789624	13	137,141,87,130,199,80,113,144,161,86,89,76,1029,	0,1146,2021,2756,6420,6989,10174,11530,12893,14221,14386,14634,14785,
#Partially deleted in new
chr7	103297434	103312415	chr7:103297434-103312415	1	+	103297459	103312199	789624	12	124,141,87,130,199,80,113,144,161,86,89,360,	0,1133,2008,2743,6407,6976,10161,11517,12880,14208,14373,14621,
#Partially deleted in new
chr7	103297452	103310475	chr7:103297452-103310475	0	+	103297459	103308968	789624	8	106,141,87,130,55,80,144,161,	0,1115,1990,2725,6533,6958,11499,12862,
#Partially deleted in new
chr7	103297453	103312365	chr7:103297453-103312365	0	+	103297459	103300215	789624	10	105,141,91,130,199,80,113,144,161,159,	0,1114,1989,2724,6388,6957,10142,11498,12861,14753,
#Partially deleted in new
chr7	103297455	103329511	chr7:103297455-103329511	0	+	103297459	103297828	789624	13	498,141,87,130,199,80,113,144,161,86,89,76,581,	0,1112,1987,2722,6386,6955,10140,11496,12859,14187,14352,14600,31475,
#Partially deleted in new
chr7	103297455	103309259	chr7:103297455-103309259	0	+	103297455	103297455	8553170	8	103,141,87,130,199,80,113,308,	0,1112,1987,2722,6386,6955,10140,11496,
#Partially deleted in new
chr7	103297456	103312312	chr7:103297456-103312312	0	+	103297459	103300215	789624	13	102,141,91,121,199,80,113,144,161,86,89,76,106,	0,1111,1986,2730,6385,6954,10139,11495,12858,14186,14351,14599,14750,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	103310577	103312351	chr7:103310577-103312351	0	+	103310577	103310577	8553170	2	1319,296,	0,1478,
#Partially deleted in new
chr7	103312473	103344666	chr7:103312473-103344666	1	-	103312568	103344622	0	15	170,155,108,101,185,150,122,92,66,81,142,99,76,191,108,	0,473,3290,3514,4356,9458,10037,10229,11124,12008,14069,15182,25262,29290,32085,
#Partially deleted in new
chr7	103312518	103344873	chr7:103312518-103344873	3	-	103312568	103344622	0	17	125,155,108,101,185,70,89,150,122,92,66,81,142,99,76,191,315,	0,428,3245,3469,4311,7090,7237,9413,9992,10184,11079,11963,14024,15137,25217,29245,32040,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	103312518	103341937	chr7:103312518-103341937	0	-	103312518	103312518	8553170	16	125,155,108,101,185,70,89,150,284,66,81,142,47,99,76,174,	0,428,3245,3469,4311,7090,7237,9413,9992,11079,11963,14024,14813,15137,25217,29245,
#Deleted in new
chr7	103312521	103317350	chr7:103312521-103317350	0	-	103312521	103312521	8553170	2	580,1587,	0,3242,
#Partially deleted in new
chr7	103312568	103344622	chr7:103312568-103344622	0	-	103312568	103312568	8553170	16	75,155,108,101,185,70,89,150,284,28,81,142,99,76,102,64,	0,378,3195,3419,4261,7040,7187,9363,9942,11029,11913,13974,15087,25167,29195,31990,
#Partially deleted in new
chr7	103316702	103319776	chr7:103316702-103319776	0	-	103316702	103316702	8553170	2	312,168,	0,2906,
#Partially deleted in new
chr7	103322599	103344588	chr7:103322599-103344588	0	-	103322599	103344588	789624	8	33,92,66,142,99,76,191,30,	0,103,998,3943,5056,15136,19164,21959,
#Partially deleted in new
chr7	103322726	103344778	chr7:103322726-103344778	0	-	103322726	103341796	789624	8	68,66,81,142,99,76,102,220,	0,871,1755,3816,4929,15009,19037,21832,
#Partially deleted in new
chr7	103322736	103324730	chr7:103322736-103324730	0	-	103322736	103322736	8553170	3	58,66,249,	0,861,1745,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	103323597	103344798	chr7:103323597-103344798	0	-	103326657	103344622	789624	8	66,81,142,47,99,76,191,240,	0,884,2945,3734,4058,14138,18166,20961,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	103335241	103344830	chr7:103335241-103344830	1	-	103337709	103344622	789624	3	2570,191,272,	0,6522,9317,
#Partially deleted in new
chr7	103344253	103362057	chr7:103344253-103362057	0	+	103347711	103362057	789624	6	89,272,38,82,100,101,	0,3256,9667,10614,11440,17703,
#Partially deleted in new
chr7	103344265	103362057	chr7:103344265-103362057	0	+	103347711	103362057	789624	6	77,258,38,82,100,101,	0,3258,9655,10602,11428,17691,
#Partially deleted in new
chr7	103344913	103369395	chr7:103344913-103369395	3	+	103347711	103368054	0	13	223,258,38,82,100,132,73,96,165,88,203,97,1499,	0,2610,9007,9954,10780,17043,17772,18430,19229,21162,22499,22799,22983,
#Partially deleted in new
chr7	103347711	103369389	chr7:103347711-103369389	1	+	103347711	103368054	0	12	70,38,82,100,132,73,96,165,88,203,97,1493,	0,6209,7156,7982,14245,14974,15632,16431,18364,19701,20001,20185,
#Deleted in new
chr7	103348600	103348771	chr7:103348600-103348771	7	+	103348600	103348600	16724991	1	171,	0,
#Partially deleted in new
chr7	103352729	103446151	chr7:103352729-103446151	1	-	103352909	103421514	789624	20	197,55,201,108,93,70,107,96,78,114,148,83,153,165,167,111,140,205,129,54,	0,24078,24869,25716,26513,27750,36278,36599,37699,38892,40189,45202,55121,57655,58690,60272,68008,68633,90353,93368,
#Partially deleted in new
chr7	103352729	103446151	chr7:103352729-103446151	1	-	103352889	103421514	789624	10	197,83,153,165,167,111,140,205,129,54,	0,45202,55121,57655,58690,60272,68008,68633,90353,93368,
#Partially deleted in new
chr7	103352729	103446151	chr7:103352729-103446151	1	-	103352889	103421514	789624	15	197,107,96,78,114,148,83,153,165,167,111,140,205,129,54,	0,36278,36599,37699,38892,40189,45202,55121,57655,58690,60272,68008,68633,90353,93368,
#Partially deleted in new
chr7	103353918	103362467	chr7:103353918-103362467	0	+	103353918	103353918	8553170	4	40,82,100,511,	0,949,1775,8038,
#Partially deleted in new
chr7	103354855	103368208	chr7:103354855-103368208	1	+	103354855	103368054	789624	11	9,82,100,132,73,96,165,88,203,97,312,	0,12,838,7101,7830,8488,9287,11220,12557,12857,13041,
#Partially deleted in new
chr7	103374206	103446177	chr7:103374206-103446177	3	-	103374398	103421514	789624	20	386,55,201,108,93,70,107,96,78,114,148,83,153,165,167,111,140,205,129,80,	0,2601,3392,4239,5036,6273,14801,15122,16222,17415,18712,23725,33644,36178,37213,38795,46531,47156,68876,71891,
#Partially deleted in new
chr7	103374206	103443196	chr7:103374206-103443196	1	-	103374398	103421514	789624	18	386,55,201,108,93,70,107,78,114,148,83,153,165,167,111,140,205,114,	0,2601,3392,4239,5036,6273,14801,16222,17415,18712,23725,33644,36178,37213,38795,46531,47156,68876,
#Partially deleted in new
chr7	103374206	103443196	chr7:103374206-103443196	0	-	103407939	103421514	789624	17	386,55,201,108,93,107,96,78,114,83,101,165,167,111,140,205,114,	0,2601,3392,4239,5036,14801,15122,16222,17415,23725,33644,36178,37213,38795,46531,47156,68876,
#Partially deleted in new
chr7	103374206	103443196	chr7:103374206-103443196	0	-	103379331	103421514	789624	15	386,55,201,93,107,114,148,83,153,165,167,111,140,205,114,	0,2601,3392,5036,14801,17415,18712,23725,33644,36178,37213,38795,46531,47156,68876,
#Partially deleted in new
chr7	103374211	103446177	chr7:103374211-103446177	1	-	103374398	103421514	789624	19	381,55,201,108,93,70,107,78,114,148,83,153,165,167,111,140,205,129,80,	0,2596,3387,4234,5031,6268,14796,16217,17410,18707,23720,33639,36173,37208,38790,46526,47151,68871,71886,
#Partially deleted in new
chr7	103374215	103446177	chr7:103374215-103446177	1	-	103374398	103421514	789624	20	377,55,207,108,93,70,107,96,78,114,148,83,153,165,167,111,140,205,129,80,	0,2592,3383,4230,5027,6264,14792,15113,16213,17406,18703,23716,33635,36169,37204,38786,46522,47147,68867,71882,
#Partially deleted in new
chr7	103374260	103443196	chr7:103374260-103443196	0	-	103379331	103421514	789624	17	332,55,201,108,93,107,78,114,148,83,153,165,167,111,140,205,114,	0,2547,3338,4185,4982,14747,16168,17361,18658,23671,33590,36124,37159,38741,46477,47102,68822,
#Partially deleted in new
chr7	103374265	103443194	chr7:103374265-103443194	1	-	103374398	103421514	789624	18	327,55,201,108,93,70,107,96,78,114,148,83,153,165,167,140,205,112,	0,2542,3333,4180,4977,6214,14742,15063,16163,17356,18653,23666,33585,36119,37154,46472,47097,68817,
#Partially deleted in new
chr7	103374265	103443194	chr7:103374265-103443194	0	-	103407939	103421514	789624	18	327,55,201,108,93,70,107,96,78,114,148,83,101,165,167,140,205,112,	0,2542,3333,4180,4977,6214,14742,15063,16163,17356,18653,23666,33585,36119,37154,46472,47097,68817,
#Partially deleted in new
chr7	103374377	103421522	chr7:103374377-103421522	1	-	103374398	103421514	789624	17	215,55,207,108,93,70,107,78,114,148,83,153,165,167,111,140,160,	0,2430,3221,4068,4865,6102,14630,16051,17244,18541,23554,33473,36007,37042,38624,46360,46985,
#Partially deleted in new
chr7	103374377	103421522	chr7:103374377-103421522	1	-	103374398	103421514	789624	18	215,55,207,108,93,70,107,96,78,114,148,83,153,165,167,111,140,160,	0,2430,3221,4068,4865,6102,14630,14951,16051,17244,18541,23554,33473,36007,37042,38624,46360,46985,
#Partially deleted in new
chr7	103388522	103446177	chr7:103388522-103446177	0	-	103388522	103388522	8553170	13	592,96,78,114,148,83,101,165,167,140,205,129,80,	0,806,1906,3099,4396,9409,19328,21862,22897,32215,32840,54560,57575,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	103433460	103433561	chr7:103433460-103433561	3	-	103433460	103433460	8553170	1	101,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	103434993	103435092	chr7:103434993-103435092	3	-	103434993	103434993	8553170	1	99,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	103445206	103514007	chr7:103445206-103514007	3	+	103445206	103445206	789624	4	1313,52,121,1239,	0,1410,59197,67562,
#Partially deleted in new
chr7	103471783	103989516	chr7:103471783-103989516	3	-	103472811	103989356	789624	64	1125,99,198,220,158,162,74,176,243,107,176,178,215,155,257,194,178,141,169,250,259,148,221,230,103,172,183,85,178,141,274,189,159,77,208,158,233,201,172,206,187,138,113,193,237,162,234,67,110,129,209,113,152,146,241,97,52,97,79,33,71,136,111,386,	0,11089,11869,14413,17958,18884,20169,23939,24742,26036,26293,28961,31232,39067,43401,47539,50238,51607,63532,67294,68413,70947,73340,79283,81677,81876,85193,86181,89748,90029,93494,94440,94817,100400,102308,103764,117812,121898,122537,124672,131520,132562,138911,139827,158156,163641,164451,168759,178490,179877,180767,182309,189592,210332,226069,229126,251356,256327,277642,281398,304773,361753,445291,517347,
#Partially deleted in new
chr7	103471783	103989516	chr7:103471783-103989516	1	-	103472811	103989356	789624	65	1127,4,99,198,220,158,162,74,176,243,107,176,178,215,155,257,194,178,141,169,250,259,148,221,230,103,172,183,85,178,141,274,189,159,77,208,158,233,201,172,206,187,138,113,193,237,162,234,67,110,129,209,113,152,146,241,97,52,97,79,33,71,136,111,386,	0,1131,11089,11869,14413,17958,18884,20169,23939,24742,26036,26293,28961,31232,39067,43401,47539,50238,51607,63532,67294,68413,70947,73340,79283,81677,81876,85193,86181,89748,90029,93494,94440,94817,100400,102308,103764,117812,121898,122537,124672,131520,132562,138911,139827,158156,163641,164451,168759,178490,179877,180767,182309,189592,210332,226069,229126,251356,256327,277642,281398,304773,361753,445291,517347,
#Partially deleted in new
chr7	103471783	103989516	chr7:103471783-103989516	1	-	103472811	103989356	789624	65	1125,6,99,198,220,158,162,74,176,243,107,176,178,215,155,257,194,178,141,169,250,259,148,221,230,103,172,183,85,178,141,274,189,159,77,208,158,233,201,172,206,187,138,113,193,237,162,234,67,110,129,209,113,152,146,241,97,52,97,79,33,71,136,111,386,	0,6605,11089,11869,14413,17958,18884,20169,23939,24742,26036,26293,28961,31232,39067,43401,47539,50238,51607,63532,67294,68413,70947,73340,79283,81677,81876,85193,86181,89748,90029,93494,94440,94817,100400,102308,103764,117812,121898,122537,124672,131520,132562,138911,139827,158156,163641,164451,168759,178490,179877,180767,182309,189592,210332,226069,229126,251356,256327,277642,281398,304773,361753,445291,517347,
#Partially deleted in new
chr7	103472229	103482948	chr7:103472229-103482948	0	-	103478394	103482948	789624	3	679,136,76,	0,6159,10643,
#Partially deleted in new
chr7	103481940	103486257	chr7:103481940-103486257	0	-	103481940	103481940	8553170	4	330,99,198,61,	0,932,1712,4256,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	103484207	103484539	chr7:103484207-103484539	3	-	103484207	103484207	8553170	1	332,	0,
#Partially deleted in new
chr7	103523499	103539488	chr7:103523499-103539488	0	-	103523499	103523499	8553170	3	32,169,411,	0,11816,15578,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	103627908	103630136	chr7:103627908-103630136	0	-	103627908	103627908	8553170	2	444,197,	0,2031,
#Partially deleted in new
chr7	104126340	104208047	chr7:104126340-104208047	3	-	104126847	104207904	0	14	553,113,111,48,113,53,91,49,131,112,75,201,93,215,	0,10440,34731,38894,40431,42132,57602,57782,61910,68802,71384,74417,77801,81492,
#Partially deleted in new
chr7	104126342	104208000	chr7:104126342-104208000	0	-	104202508	104207904	789624	15	551,113,111,48,113,53,91,49,131,112,75,201,134,93,168,	0,10438,34729,38892,40429,42130,57600,57780,61908,68800,71382,74415,76068,77799,81490,
#Partially deleted in new
chr7	104126837	104165734	chr7:104126837-104165734	0	-	104126837	104126837	8553170	4	56,113,111,500,	0,9943,34234,38397,
#Partially deleted in new
chr7	104167993	104207957	chr7:104167993-104207957	1	-	104168374	104207904	0	9	532,91,49,131,112,75,201,93,125,	0,15949,16129,20257,27149,29731,32764,36148,39839,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	104184219	104197767	chr7:104184219-104197767	0	-	104184219	104184219	8553170	4	242,131,112,43,	0,4031,10923,13505,
#Partially deleted in new
chr7	104187542	104208009	chr7:104187542-104208009	0	-	104187542	104187542	8553170	7	425,131,112,75,201,93,177,	0,708,7600,10182,13215,16599,20290,
#Partially deleted in new
chr7	104200820	104208000	chr7:104200820-104208000	0	-	104202508	104207904	789624	4	138,168,93,168,	0,1556,3321,7012,
#Partially deleted in new
chr7	104202508	104208047	chr7:104202508-104208047	1	-	104202508	104207904	789624	3	36,93,215,	0,1633,5324,
#Partially deleted in new
chr7	104328655	104907232	chr7:104328655-104907232	3	+	104328821	104906215	789624	3	569,237,1046,	0,408019,577531,
#Partially deleted in new
chr7	104328699	104906754	chr7:104328699-104906754	1	+	104328821	104845398	789624	4	525,237,48,568,	0,407975,516682,577487,
#Deleted in new
chr7	104667748	104669576	chr7:104667748-104669576	7	+	104667748	104667748	16724991	1	1828,	0,
#Duplicated in new
chr7	104738596	104757748	chr7:104738596-104757748	1	-	104738596	104738596	8553170	4	388,131,89,140,	0,5453,14118,19012,
#Duplicated in new
chr7	104738597	104804088	chr7:104738597-104804088	3	-	104738597	104738597	8553170	7	358,131,77,120,252,125,133,	0,5452,14117,21105,61220,64241,65358,
#Partially deleted in new
chr7	104768668	104804086	chr7:104768668-104804086	0	-	104768668	104768668	8553170	4	348,252,125,131,	0,31149,34170,35287,
#Partially deleted in new
chr7	104785211	104804107	chr7:104785211-104804107	1	-	104785211	104785211	8553170	7	147,55,64,71,252,125,152,	0,519,1306,13125,14606,17627,18744,
#Partially deleted in new
chr7	104796505	104804084	chr7:104796505-104804084	1	-	104796505	104796505	789624	4	444,252,125,129,	0,3312,6333,7450,
#Partially deleted in new
chr7	104796515	104804107	chr7:104796515-104804107	0	-	104796515	104796515	8553170	5	434,71,252,125,152,	0,1821,3302,6323,7440,
#Partially deleted in new
chr7	104799392	104803539	chr7:104799392-104803539	0	-	104799392	104799392	8553170	3	677,125,88,	0,3446,4059,
#Deleted in new
chr7	104826335	104826796	chr7:104826335-104826796	7	+	104826335	104826335	16724991	1	461,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	104894627	104926645	chr7:104894627-104926645	3	-	104894627	104894627	5263520	4	1437,161,41,193,	0,17288,25757,31825,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	104911915	104926630	chr7:104911915-104926630	1	-	104911915	104911915	8553170	5	161,122,421,41,178,	0,3790,5644,8469,14537,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	104911927	104912193	chr7:104911927-104912193	3	+	104911927	104911927	8553170	1	266,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	104941062	104962060	chr7:104941062-104962060	0	+	104941062	104941062	8553170	2	608,77,	0,20921,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	104941205	104962334	chr7:104941205-104962334	3	+	104941205	104941205	8553170	2	540,351,	0,20778,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	104950314	105013044	chr7:104950314-105013044	3	-	104950314	104950314	8553170	3	218,207,113,	0,3385,62617,
#Partially deleted in new
chr7	104982098	105013024	chr7:104982098-105013024	1	-	104982098	104982098	8553170	2	593,93,	0,30833,
#Deleted in new
chr7	105013424	105014321	chr7:105013424-105014321	3	-	105013424	105013424	8553170	2	555,181,	0,716,
#Partially deleted in new
chr7	105014178	105114085	chr7:105014178-105114085	3	+	105040952	105113333	0	27	357,74,185,115,230,81,59,173,39,231,131,118,110,265,99,165,309,255,145,251,57,564,287,89,126,98,2261,	0,23947,26660,47985,49172,52548,59440,60464,61864,62784,63124,64667,67509,75830,77037,87246,87707,91260,91680,92343,92987,93183,94763,96101,96298,96592,97646,
#Partially deleted in new
chr7	105014189	105114084	chr7:105014189-105114084	1	+	105040952	105113333	0	26	308,149,115,230,81,59,173,39,231,131,118,110,265,99,165,309,255,145,251,57,564,287,89,126,98,2260,	0,26685,47974,49161,52537,59429,60453,61853,62773,63113,64656,67498,75819,77026,87235,87696,91249,91669,92332,92976,93172,94752,96090,96287,96581,97635,
#Partially deleted in new
chr7	105014189	105114361	chr7:105014189-105114361	0	+	105040952	105107215	0	26	346,74,185,115,230,81,59,173,39,231,131,118,110,265,99,165,309,255,97,57,564,287,89,126,98,2537,	0,23936,26649,47974,49161,52537,59429,60453,61853,62773,63113,64656,67498,75819,77026,87235,87696,91249,91669,92976,93172,94752,96090,96287,96581,97635,
#Partially deleted in new
chr7	105014205	105090132	chr7:105014205-105090132	0	+	105040952	105090132	789624	10	330,185,59,173,39,231,131,118,110,124,	0,26633,59413,60437,61837,62757,63097,64640,67482,75803,
#Partially deleted in new
chr7	105014207	105074777	chr7:105014207-105074777	0	+	105040952	105074777	789624	7	328,185,115,230,81,59,135,	0,26631,47956,49143,52519,59411,60435,
#Partially deleted in new
chr7	105014217	105091609	chr7:105014217-105091609	1	+	105040952	105091422	0	15	318,74,185,115,230,81,59,173,39,231,131,118,110,265,394,	0,23908,26621,47946,49133,52509,59401,60425,61825,62745,63085,64628,67470,75791,76998,
#Partially deleted in new
chr7	105038125	105090132	chr7:105038125-105090132	0	+	105040952	105064046	789624	14	74,185,115,230,89,81,59,173,39,231,131,118,110,124,	0,2713,24038,25225,25902,28601,35493,36517,37917,38837,39177,40720,43562,51883,
#Partially deleted in new
chr7	105061917	105063386	chr7:105061917-105063386	0	+	105061917	105061917	8553170	2	361,36,	0,1433,
#Partially deleted in new
chr7	105062197	105063827	chr7:105062197-105063827	0	+	105062197	105062197	8553170	2	81,477,	0,1153,
#Partially deleted in new
chr7	105063349	105101478	chr7:105063349-105101478	1	+	105063360	105090211	789624	15	26,12,191,81,59,173,39,231,131,118,110,118,146,99,54,	0,27,40,3377,10269,11293,12693,13613,13953,15496,18338,26659,26778,27866,38075,
#Deleted in new
chr7	105077115	105077808	chr7:105077115-105077808	0	+	105077115	105077115	8553170	2	78,506,	0,187,
#Deleted in new
chr7	105101470	105102649	chr7:105101470-105102649	0	+	105101470	105102200	789624	2	119,764,	0,415,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	105102837	105105483	chr7:105102837-105105483	3	-	105102837	105102837	8553170	1	2646,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	105107899	105110556	chr7:105107899-105110556	0	+	105107899	105108582	789624	5	26,115,287,89,80,	0,644,1042,2380,2577,
#Partially deleted in new
chr7	105109039	105110867	chr7:105109039-105110867	0	+	105109039	105110867	789624	3	189,89,97,	0,1240,1731,
#Deleted in new
chr7	105110703	105117479	chr7:105110703-105117479	0	-	105110703	105110703	8553170	3	485,117,113,	0,4683,6663,
#Partially deleted in new
chr7	105115268	105132793	chr7:105115268-105132793	0	-	105117837	105132793	789624	7	235,145,315,93,93,70,3,	0,2098,2439,10513,10979,11724,17522,
#Partially deleted in new
chr7	105116375	105388894	chr7:105116375-105388894	1	-	105117837	105388806	0	16	1647,93,70,108,101,483,247,26,166,107,88,88,109,158,55,104,	0,9872,10617,16415,16628,25632,26708,28907,30117,44131,51001,51632,52781,87252,272272,272415,
#Partially deleted in new
chr7	105116376	105269015	chr7:105116376-105269015	1	-	105117837	105268843	0	15	1646,93,70,108,101,483,247,26,166,107,88,88,109,158,210,	0,9871,10616,16414,16627,25631,26707,28906,30116,44130,51000,51631,52780,87251,152429,
#Partially deleted in new
chr7	105117295	105144066	chr7:105117295-105144066	0	-	105117295	105117295	8553170	7	727,93,70,108,101,483,983,	0,8952,9697,15495,15708,24712,25788,
#Partially deleted in new
chr7	105117348	105203656	chr7:105117348-105203656	0	-	105117348	105117348	8553170	2	407,29,	0,86279,
#Partially deleted in new
chr7	105117387	105142336	chr7:105117387-105142336	0	-	105117837	105142336	789624	6	635,93,70,108,101,329,	0,8394,9605,15403,15616,24620,
#Partially deleted in new
chr7	105117525	105298779	chr7:105117525-105298779	3	-	105117837	105268843	0	17	497,93,70,108,101,483,247,26,166,107,88,88,109,158,64,113,42,	0,8722,9467,15265,15478,24482,25558,27757,28967,42981,49851,50482,51631,86102,151280,179895,181212,
#Partially deleted in new
chr7	105117579	105133068	chr7:105117579-105133068	0	-	105117837	105133068	789624	6	443,93,93,70,108,65,	0,8202,8668,9413,15211,15424,
#Partially deleted in new
chr7	105160300	105203732	chr7:105160300-105203732	0	-	105160300	105160300	8553170	5	313,88,88,109,105,	0,7076,7707,8856,43327,
#Partially deleted in new
chr7	105160544	105389391	chr7:105160544-105389391	0	-	105160544	105389370	789624	7	69,88,88,109,158,55,148,	0,6832,7463,8612,43083,228103,228699,
#Partially deleted in new
chr7	105167376	105388894	chr7:105167376-105388894	0	-	105167376	105268843	789624	7	88,88,109,158,64,55,104,	0,631,1780,36251,101429,221271,221414,
#Partially deleted in new
chr7	105189189	105189814	chr7:105189189-105189814	7	+	105189189	105189189	16724991	2	298,67,	0,558,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	105203626	105399308	chr7:105203626-105399308	0	-	105203626	105203626	8553170	4	159,129,64,153,	0,2774,65179,195529,
#Partially deleted in new
chr7	105203693	105388898	chr7:105203693-105388898	0	-	105306435	105388806	789624	6	92,64,113,136,55,108,	0,65112,93727,102742,184954,185097,
#Partially deleted in new
chr7	105203722	105389390	chr7:105203722-105389390	0	-	105203722	105203722	8553170	4	63,64,55,147,	0,65083,184925,185521,
#Deleted in new
chr7	105204599	105204859	chr7:105204599-105204859	7	+	105204599	105204599	16724991	1	260,	0,
#Deleted in new
chr7	105244651	105244970	chr7:105244651-105244970	7	+	105244651	105244651	16724991	1	319,	0,
#Partially deleted in new
chr7	105301521	105302086	chr7:105301521-105302086	7	+	105301521	105301521	16724991	1	565,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	105304276	105306642	chr7:105304276-105306642	3	+	105304276	105304276	8553170	2	155,391,	0,1975,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	105332789	105332896	chr7:105332789-105332896	3	+	105332789	105332789	8553170	1	107,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	105456510	105522258	chr7:105456510-105522258	3	-	105457789	105508512	0	16	1416,92,130,102,127,161,62,126,129,78,112,145,102,85,406,207,	0,2657,6110,8802,11826,14177,15621,24541,25801,35029,38631,45909,49444,49678,51604,65541,
#Partially deleted in new
chr7	105457658	105522258	chr7:105457658-105522258	1	-	105457789	105508512	0	16	268,92,130,102,127,161,62,126,129,78,112,145,102,85,430,207,	0,1509,4962,7654,10678,13029,14473,23393,24653,33881,37483,44761,48296,48530,50456,64393,
#Partially deleted in new
chr7	105470285	105472188	chr7:105470285-105472188	0	-	105470285	105470285	8553170	2	563,57,	0,1846,
#Partially deleted in new
chr7	105491548	105495347	chr7:105491548-105495347	0	-	105491548	105491548	8553170	2	69,206,	0,3593,
#Partially deleted in new
chr7	105491585	105508135	chr7:105491585-105508135	0	-	105491585	105508135	789624	5	32,112,145,85,21,	0,3556,10834,14603,16529,
#Deleted in new
chr7	105530208	105530671	chr7:105530208-105530671	7	+	105530208	105530208	16724991	1	463,	0,
#Partially deleted in new
chr7	105532084	105567677	chr7:105532084-105567677	3	+	105532315	105567311	789624	15	273,46,185,242,174,150,157,111,226,138,200,215,181,119,559,	0,739,4480,10323,14825,15099,16469,17970,18176,19485,22943,31648,33192,33445,35034,
#Partially deleted in new
chr7	105532168	105547321	chr7:105532168-105547321	0	+	105532315	105542436	789624	6	189,46,48,242,174,138,	0,655,4396,10239,14741,15015,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	105532180	105542457	chr7:105532180-105542457	0	+	105532315	105535609	789624	5	177,46,120,185,50,	0,643,3391,4384,10227,
#Partially deleted in new
chr7	105532183	105546918	chr7:105532183-105546918	0	+	105532315	105546918	789624	5	174,46,92,242,9,	0,640,4474,10224,14726,
#Partially deleted in new
chr7	105532211	105567676	chr7:105532211-105567676	0	+	105532315	105542529	789624	15	146,46,48,158,174,150,157,111,226,138,200,215,181,119,558,	0,612,4353,10280,14698,14972,16342,17843,18049,19358,22816,31521,33065,33318,34907,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	105541600	105542556	chr7:105541600-105542556	0	+	105541600	105541600	8553170	2	255,149,	0,807,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	105542239	105546996	chr7:105542239-105546996	0	+	105542239	105542239	8553170	2	410,87,	0,4670,
#Partially deleted in new
chr7	105550054	105555363	chr7:105550054-105555363	0	+	105550054	105550054	8553170	4	111,226,138,336,	0,206,1515,4973,
#Partially deleted in new
chr7	105565119	105591520	chr7:105565119-105591520	1	-	105565401	105569491	789624	4	328,88,165,216,	0,4083,4287,26185,
#Partially deleted in new
chr7	105565127	105581500	chr7:105565127-105581500	1	-	105565446	105581463	789624	5	320,24,88,165,143,	0,2339,4075,4279,16230,
#Partially deleted in new
chr7	105565232	105581496	chr7:105565232-105581496	3	-	105565548	105581463	789624	5	383,24,88,165,139,	0,2234,3970,4174,16125,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	105566322	105581486	chr7:105566322-105581486	1	-	105567453	105581463	789624	4	1168,88,165,129,	0,2880,3084,15035,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	105567101	105600875	chr7:105567101-105600875	1	-	105567453	105569491	789624	5	389,88,165,87,112,	0,2101,2305,24203,33662,
#Partially deleted in new
chr7	105567194	105581690	chr7:105567194-105581690	1	-	105567453	105581463	789624	3	296,88,333,	0,2008,14163,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	105571082	105573660	chr7:105571082-105573660	3	+	105571082	105571082	8553170	1	2578,	0,
#Deleted in new
chr7	105582257	105583256	chr7:105582257-105583256	7	-	105582257	105582257	16724991	1	999,	0,
#Partially deleted in new
chr7	105605066	105876604	chr7:105605066-105876604	3	-	105607851	105876558	789624	12	2824,75,955,122,193,257,83,284,223,105,69,227,	0,5462,8795,15133,19008,33286,34420,37771,59999,183537,270745,271311,
#Partially deleted in new
chr7	105607770	105679162	chr7:105607770-105679162	1	-	105607851	105665271	789624	10	123,75,955,122,193,257,83,284,223,111,	0,2758,6091,12429,16304,30582,31716,35067,57295,71281,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	105613473	105678018	chr7:105613473-105678018	0	-	105649559	105665271	789624	9	1343,122,193,257,83,284,154,223,73,	0,6726,10601,24879,26013,29364,35933,51592,64472,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	105613473	105624266	chr7:105613473-105624266	0	-	105613711	105624266	789624	4	1343,306,122,192,	0,4318,6726,10601,
#Partially deleted in new
chr7	105613732	105691637	chr7:105613732-105691637	0	-	105613732	105665271	789624	8	1084,122,193,257,83,284,223,78,	0,6467,10342,24620,25754,29105,51333,77827,
#Partially deleted in new
chr7	105620232	105678023	chr7:105620232-105678023	0	-	105620232	105620232	8553170	6	89,257,83,284,223,78,	0,18120,19254,22605,44833,57713,
#Partially deleted in new
chr7	105638368	105679206	chr7:105638368-105679206	0	-	105638368	105638368	8553170	4	241,284,223,155,	0,4469,26697,40683,
#Partially deleted in new
chr7	105760372	105876582	chr7:105760372-105876582	1	-	105761377	105876558	789624	4	1091,105,69,205,	0,28231,115439,116005,
#Partially deleted in new
chr7	105760553	105876477	chr7:105760553-105876477	1	-	105761377	105876474	789624	3	910,105,100,	0,28050,115824,
#Partially deleted in new
chr7	105788122	105876592	chr7:105788122-105876592	0	-	105788122	105788122	8553170	3	586,69,215,	0,87689,88255,
#Partially deleted in new
chr7	105819491	105820101	chr7:105819491-105820101	7	+	105819491	105819491	16724991	1	610,	0,
#Deleted in new
chr7	105875090	105876574	chr7:105875090-105876574	0	-	105875090	105875090	8553170	3	144,69,197,	0,721,1287,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	105876795	105910598	chr7:105876795-105910598	0	+	105876795	105876795	8553170	2	462,372,	0,33431,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	105876817	105890103	chr7:105876817-105890103	0	+	105876817	105876817	8553170	4	440,152,433,578,	0,1389,2827,12708,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	105876820	106032465	chr7:105876820-106032465	0	+	105876820	105876820	8553170	15	437,225,156,203,166,98,190,172,103,99,182,14,32,49,73,	0,34196,35662,98023,104147,107371,127677,136039,138290,139106,147560,149861,151730,153971,155572,
#Partially deleted in new
chr7	105877103	106004596	chr7:105877103-106004596	0	+	105980982	106001496	789624	4	154,166,121,99,	0,103864,124358,127394,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	105911038	105924183	chr7:105911038-105924183	0	+	105911038	105911038	8553170	4	203,156,73,561,	0,1444,8496,12584,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr7	105963238	106033772	chr7:105963238-106033772	3	+	105963318	106032697	789624	19	126,203,166,98,95,105,149,190,172,103,99,227,172,251,182,14,32,49,1380,	0,11605,17729,20953,31512,33011,38223,41259,49621,51872,52688,54607,57134,58959,61142,63443,65312,67553,69154,
#Partially deleted in new
chr7	105963258	106032815	chr7:105963258-106032815	1	+	105980982	106032697	789624	18	106,166,98,95,105,149,190,172,103,99,227,172,251,182,14,32,49,423,	0,17709,20933,31492,32991,38203,41239,49601,51852,52668,54587,57114,58939,61122,63423,65292,67533,69134,
#Partially deleted in new
chr7	105963281	106004686	chr7:105963281-106004686	0	+	105963281	105963281	8553170	4	83,166,98,189,	0,17686,20910,41216,
#Partially deleted in new
chr7	105963295	106013031	chr7:105963295-106013031	0	+	105963318	106001496	789624	6	69,203,166,149,190,172,	0,11548,17672,38166,41202,49564,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	106001474	106033773	chr7:106001474-106033773	0	+	106001474	106030820	789624	10	136,190,172,103,99,182,14,32,49,1381,	0,3023,11385,13636,14452,22906,25207,27076,29317,30918,
#Partially deleted in new
chr7	106001546	106004825	chr7:106001546-106004825	0	+	106001546	106001546	8553170	2	64,328,	0,2951,
#Partially deleted in new
chr7	106001547	106004824	chr7:106001547-106004824	0	+	106001547	106001547	8553170	2	35,327,	0,2950,
#Partially deleted in new
chr7	106015123	106022448	chr7:106015123-106022448	0	+	106015123	106022448	789624	3	59,172,251,	0,5249,7074,
#Partially deleted in new
chr7	106028427	106032763	chr7:106028427-106032763	0	+	106028427	106028427	8553170	3	155,49,371,	0,2364,3965,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	106035797	106036431	chr7:106035797-106036431	3	+	106035797	106035797	8553170	1	634,	0,
#Partially deleted in new
chr7	106090502	106112331	chr7:106090502-106112331	1	-	106091804	106112208	789624	5	1437,189,208,125,192,	0,2446,7187,8655,21637,
#Partially deleted in new
chr7	106090504	106112576	chr7:106090504-106112576	3	-	106091804	106112529	789624	6	1435,189,208,125,72,98,	0,2444,7185,8653,21635,21974,
#Partially deleted in new
chr7	106091639	106112142	chr7:106091639-106112142	0	-	106093075	106112142	789624	6	300,189,10,208,125,3,	0,1309,4653,6050,7518,20500,
#Partially deleted in new
chr7	106091698	106093252	chr7:106091698-106093252	0	-	106091698	106091698	8553170	2	241,304,	0,1250,
#Deleted in new
chr7	106111831	106112576	chr7:106111831-106112576	0	-	106111831	106111831	8553170	2	380,98,	0,647,
#Partially deleted in new
chr7	106125370	106126700	chr7:106125370-106126700	7	+	106125370	106125370	16724991	1	1330,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	106208166	106208267	chr7:106208166-106208267	3	+	106208166	106208166	8553170	1	101,	0,
#Partially deleted in new
chr7	106248284	106285192	chr7:106248284-106285192	3	-	106251082	106284884	0	11	2909,135,141,120,226,137,159,129,104,157,365,	0,4732,6079,13303,15107,20179,20869,24245,26661,28738,36543,
#Deleted in new
chr7	106251124	106253618	chr7:106251124-106253618	0	-	106251124	106251124	8553170	2	69,602,	0,1892,
#Partially deleted in new
chr7	106261500	106284921	chr7:106261500-106284921	1	-	106261569	106284884	789624	8	207,226,137,159,129,104,157,94,	0,1891,6963,7653,11029,13445,15522,23327,
#Partially deleted in new
chr7	106263157	106284951	chr7:106263157-106284951	0	-	106263157	106263157	8553170	5	460,137,159,129,124,	0,5306,5996,9372,21670,
#Deleted in new
chr7	106268334	106269205	chr7:106268334-106269205	0	-	106268334	106268334	8553170	2	266,52,	0,819,
#Partially deleted in new
chr7	106269154	106284632	chr7:106269154-106284632	0	-	106269154	106269154	8553170	5	158,129,104,157,285,	0,3375,5791,7868,15193,
#Partially deleted in new
chr7	106270214	106284951	chr7:106270214-106284951	0	-	106270214	106270214	8553170	5	78,129,104,157,124,	0,2315,4731,6808,14613,
#Partially deleted in new
chr7	106270257	106284951	chr7:106270257-106284951	0	-	106270257	106270257	8553170	5	75,129,104,157,124,	0,2272,4688,6765,14570,
#Partially deleted in new
chr7	106271864	106284887	chr7:106271864-106284887	0	-	106271864	106271864	8553170	4	794,104,157,60,	0,3081,5158,12963,
#Partially deleted in new
chr7	106272038	106284950	chr7:106272038-106284950	0	-	106272038	106272038	8553170	5	68,129,104,157,123,	0,491,2907,4984,12789,
#Partially deleted in new
chr7	106274999	106286326	chr7:106274999-106286326	0	-	106274999	106284884	789624	4	50,157,154,786,	0,2023,9828,10541,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	106275326	106284950	chr7:106275326-106284950	0	-	106275326	106275326	8553170	2	1853,123,	0,9501,
#Partially deleted in new
chr7	106277055	106285612	chr7:106277055-106285612	0	-	106277055	106284884	789624	3	124,104,72,	0,7772,8485,
#Deleted in new
chr7	106285479	106286326	chr7:106285479-106286326	3	+	106285479	106285479	8553170	1	847,	0,
#Deleted in new
chr7	106315224	106315743	chr7:106315224-106315743	7	+	106315224	106315224	16724991	1	519,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	106473871	106639908	chr7:106473871-106639908	0	-	106473871	106473871	8553170	5	111,121,67,95,149,	0,17138,136525,141805,165888,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	106489723	106770207	chr7:106489723-106770207	1	-	106489723	106489723	8553170	5	341,121,67,116,56,	0,1286,120673,270842,280428,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	106569875	106598808	chr7:106569875-106598808	1	-	106569875	106569875	8553170	4	1269,213,133,55,	0,3072,21674,28878,
#Partially deleted in new
chr7	106570946	106598908	chr7:106570946-106598908	2	-	106570946	106570946	8553170	3	198,197,155,	0,2017,27807,
#Deleted in new
chr7	106656764	106660996	chr7:106656764-106660996	3	-	106660188	106660896	789624	1	4232,	0,
#Deleted in new
chr7	106659316	106660926	chr7:106659316-106660926	1	-	106659898	106660884	789624	3	1236,4,335,	0,1238,1275,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	106774954	106782576	chr7:106774954-106782576	3	+	106774954	106774954	8553170	2	246,2582,	0,5040,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	106777541	106782852	chr7:106777541-106782852	0	+	106777541	106777541	8553170	2	191,2858,	0,2453,
#Deleted in new
chr7	106781599	106781715	chr7:106781599-106781715	7	-	106781599	106781599	16724991	1	116,	0,
#Partially deleted in new
chr7	106865277	106905821	chr7:106865277-106905821	1	+	106867561	106905387	0	11	73,2007,66,226,104,147,91,131,112,158,713,	0,2272,7259,7435,9422,14241,16839,17755,18877,20857,39831,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	106865295	106907132	chr7:106865295-106907132	3	+	106867561	106905387	0	11	131,2007,66,226,104,147,91,131,112,158,2024,	0,2254,7241,7417,9404,14223,16821,17737,18859,20839,39813,
#Partially deleted in new
chr7	106865338	106883131	chr7:106865338-106883131	0	+	106872832	106883131	789624	7	88,66,226,104,147,91,99,	0,7198,7374,9361,14180,16778,17694,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	106865478	106907145	chr7:106865478-106907145	1	+	106867561	106905387	0	11	298,2007,66,226,104,147,91,131,112,158,2037,	0,2071,7058,7234,9221,14040,16638,17554,18676,20656,39630,
#Deleted in new
chr7	106882163	106882936	chr7:106882163-106882936	0	+	106882163	106882163	8553170	2	44,404,	0,369,
#Partially deleted in new
chr7	107044648	107161811	chr7:107044648-107161811	3	+	107044907	107159582	789624	11	566,36,53,84,107,154,102,75,66,139,2363,	0,25632,77303,83563,96198,101659,106273,108528,112335,112537,114800,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	107066590	107079520	chr7:107066590-107079520	1	-	107066590	107066590	8553170	4	310,185,121,55,	0,552,2157,12875,
#Partially deleted in new
chr7	107068538	107133664	chr7:107068538-107133664	0	-	107068538	107068538	8553170	3	330,52,61,	0,60495,65065,
#Partially deleted in new
chr7	107069624	107140953	chr7:107069624-107140953	0	+	107069624	107069624	8553170	5	362,36,53,84,107,	0,656,52327,58587,71222,
#Partially deleted in new
chr7	107077225	107133733	chr7:107077225-107133733	3	-	107077225	107077225	8553170	3	160,52,130,	0,51808,56378,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	107077316	107078238	chr7:107077316-107078238	0	-	107077316	107077316	8553170	2	69,472,	0,450,
#Partially deleted in new
chr7	107081838	107133664	chr7:107081838-107133664	0	-	107081838	107081838	8553170	3	250,52,61,	0,47195,51765,
#Partially deleted in new
chr7	107091675	107146462	chr7:107091675-107146462	0	+	107091675	107091675	8553170	5	210,53,84,107,155,	0,30276,36536,49171,54632,
#Partially deleted in new
chr7	107128787	107133664	chr7:107128787-107133664	0	-	107128787	107128787	8553170	2	298,61,	0,4816,
#Partially deleted in new
chr7	107168960	107202508	chr7:107168960-107202508	3	+	107179893	107201431	0	11	67,184,229,142,112,113,157,145,318,142,1095,	0,10918,13412,16840,17400,17608,20331,21212,26873,31199,32453,
#Partially deleted in new
chr7	107168989	107182415	chr7:107168989-107182415	0	+	107179893	107182415	789624	4	38,298,184,43,	0,5458,10889,13383,
#Partially deleted in new
chr7	107168999	107182576	chr7:107168999-107182576	0	+	107179893	107182576	789624	3	28,246,204,	0,10817,13373,
#Partially deleted in new
chr7	107169014	107202529	chr7:107169014-107202529	1	+	107179893	107201431	0	11	171,184,229,142,112,113,157,145,318,142,1116,	0,10864,13358,16786,17346,17554,20277,21158,26819,31145,32399,
#Partially deleted in new
chr7	107169719	107179978	chr7:107169719-107179978	0	+	107179893	107179978	789624	2	411,162,	0,10097,
#Partially deleted in new
chr7	107169766	107174527	chr7:107169766-107174527	0	+	107169766	107169766	8553170	3	364,135,80,	0,3690,4681,
#Partially deleted in new
chr7	107169768	107182528	chr7:107169768-107182528	0	+	107179893	107182528	789624	3	362,184,156,	0,10110,12604,
#Partially deleted in new
chr7	107169772	107201635	chr7:107169772-107201635	1	+	107179893	107201431	0	12	358,298,184,229,142,112,113,157,145,318,142,222,	0,4675,10106,12600,16028,16588,16796,19519,20400,26061,30387,31641,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	107179625	107182536	chr7:107179625-107182536	0	+	107179893	107182536	789624	2	437,164,	0,2747,
#Partially deleted in new
chr7	107179877	107201404	chr7:107179877-107201404	0	+	107179877	107179877	8553170	9	185,229,142,112,113,157,145,318,1245,	0,2495,5923,6483,6691,9414,10295,15956,20282,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	107179917	107197122	chr7:107179917-107197122	0	+	107179917	107196155	789624	8	145,229,142,112,113,157,145,1289,	0,2455,5883,6443,6651,9374,10255,15916,
#Partially deleted in new
chr7	107186463	107200300	chr7:107186463-107200300	0	+	107186463	107186463	8553170	4	9,113,318,141,	0,105,9370,13696,
#Partially deleted in new
chr7	107189875	107195973	chr7:107189875-107195973	0	+	107189875	107189875	8553170	2	442,140,	0,5958,
#Deleted in new
chr7	107192558	107193300	chr7:107192558-107193300	3	-	107192558	107192558	8553170	1	742,	0,
#Partially deleted in new
chr7	107195847	107200331	chr7:107195847-107200331	0	+	107195847	107200319	789624	2	304,172,	0,4312,
#Partially deleted in new
chr7	107201554	107564040	chr7:107201554-107564040	1	-	107203515	107563989	789624	21	2076,80,127,77,238,104,111,100,162,205,82,78,113,166,131,121,70,55,58,140,238,	0,8971,9544,29060,34895,46841,56718,79745,82016,96587,122885,160478,160753,171040,210947,325682,346556,346723,352730,356421,362248,
#Partially deleted in new
chr7	107202563	107564514	chr7:107202563-107564514	3	-	107203515	107563989	789624	22	1067,80,127,77,238,104,63,111,100,162,205,82,78,113,166,131,121,70,55,58,140,712,	0,7962,8535,28051,33886,45832,54168,55709,78736,81007,95578,121876,159469,159744,170031,209938,324673,345547,345714,351721,355412,361239,
#Partially deleted in new
chr7	107207847	107564261	chr7:107207847-107564261	1	-	107210521	107563989	789624	21	2758,127,77,238,104,63,111,100,162,205,82,78,113,166,131,121,70,55,58,140,459,	0,3251,22767,28602,40548,48884,50425,73452,75723,90294,116592,154185,154460,164747,204654,319389,340263,340430,346437,350128,355955,
#Partially deleted in new
chr7	107210454	107253247	chr7:107210454-107253247	0	-	107210454	107210454	8553170	6	151,127,77,238,104,200,	0,644,20160,25995,37941,42593,
#Partially deleted in new
chr7	107236554	107258620	chr7:107236554-107258620	0	-	107236554	107236554	8553170	6	133,104,29,63,111,141,	0,11841,16493,20177,21718,21925,
#Partially deleted in new
chr7	107236654	107258620	chr7:107236654-107258620	0	-	107236654	107236654	8553170	5	33,104,29,63,348,	0,11741,16393,20077,21618,
#Partially deleted in new
chr7	107362067	107480942	chr7:107362067-107480942	0	-	107362067	107362067	8553170	5	43,113,166,131,121,	0,240,10527,50434,118754,
#Partially deleted in new
chr7	107372594	107549259	chr7:107372594-107549259	0	-	107372594	107372594	8553170	6	166,131,121,70,55,49,	0,39907,154642,175516,175683,176616,
#Partially deleted in new
chr7	107450082	107450362	chr7:107450082-107450362	7	+	107450082	107450082	16724991	1	280,	0,
#Deleted in new
chr7	107470017	107471549	chr7:107470017-107471549	0	+	107470017	107470017	8553170	3	32,250,178,	0,178,1354,
#Deleted in new
chr7	107470059	107475659	chr7:107470059-107475659	3	+	107474060	107475362	789624	3	386,931,1625,	0,1312,3975,
#Deleted in new
chr7	107470240	107473011	chr7:107470240-107473011	0	+	107470240	107470240	8553170	2	205,1640,	0,1131,
#Partially deleted in new
chr7	107527236	107563934	chr7:107527236-107563934	0	-	107527236	107563896	789624	6	121,70,55,58,140,132,	0,20874,21041,27048,30739,36566,
#Deleted in new
chr7	107547997	107548332	chr7:107547997-107548332	0	-	107547997	107547997	8553170	2	183,55,	0,280,
#Partially deleted in new
chr7	107563483	107567188	chr7:107563483-107567188	0	+	107563483	107563483	8553170	3	263,89,139,	0,1104,3566,
#Partially deleted in new
chr7	107563957	107578464	chr7:107563957-107578464	3	+	107567070	107577560	789624	8	252,89,137,122,118,123,227,1152,	0,630,3092,7187,9746,11230,12408,13355,
#Partially deleted in new
chr7	107563957	107578015	chr7:107563957-107578015	0	+	107567070	107575222	789624	7	252,89,137,122,123,184,703,	0,630,3092,7187,11230,12451,13355,
#Partially deleted in new
chr7	107563979	107577909	chr7:107563979-107577909	0	+	107567070	107575222	789624	7	80,89,137,122,123,227,597,	0,608,3070,7165,11208,12386,13333,
#Partially deleted in new
chr7	107563987	107577850	chr7:107563987-107577850	0	+	107567070	107573825	789624	8	260,89,137,122,180,123,227,538,	0,600,3062,7157,9716,11200,12378,13325,
#Partially deleted in new
chr7	107563998	107578305	chr7:107563998-107578305	0	+	107567070	107575222	789624	6	678,137,122,123,227,993,	0,3051,7146,11189,12367,13314,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	107564024	107575282	chr7:107564024-107575282	0	+	107567070	107567785	789624	7	185,89,137,111,122,118,95,	0,563,3025,3730,7120,9679,11163,
#Partially deleted in new
chr7	107564030	107567147	chr7:107564030-107567147	0	+	107564030	107564030	8553170	2	646,98,	0,3019,
#Partially deleted in new
chr7	107570067	107577191	chr7:107570067-107577191	0	+	107570067	107570067	8553170	3	1199,123,826,	0,5120,6298,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	107573855	107575742	chr7:107573855-107575742	0	+	107573855	107573855	8553170	2	28,555,	0,1332,
#Partially deleted in new
chr7	107574892	107577656	chr7:107574892-107577656	0	+	107574892	107574892	8553170	3	418,227,344,	0,1473,2420,
#Deleted in new
chr7	107579556	107580057	chr7:107579556-107580057	3	-	107579556	107579556	8553170	1	501,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	107579976	107621870	chr7:107579976-107621870	3	+	107580772	107618363	0	8	325,106,101,151,136,109,101,3543,	0,782,3905,13978,15890,20420,33355,38351,
#Partially deleted in new
chr7	107580245	107618615	chr7:107580245-107618615	1	+	107594043	107618363	789624	7	56,101,151,136,109,101,288,	0,3636,13709,15621,20151,33086,38082,
#Partially deleted in new
chr7	107580250	107594208	chr7:107580250-107594208	0	+	107580250	107580250	8553170	4	51,106,101,254,	0,508,3631,13704,
#Partially deleted in new
chr7	107580257	107587952	chr7:107580257-107587952	0	+	107580257	107580257	8553170	4	44,106,101,542,	0,501,3624,7153,
#Partially deleted in new
chr7	107580259	107618635	chr7:107580259-107618635	0	+	107580259	107580259	8553170	8	42,101,151,134,109,101,129,308,	0,3622,13695,15609,20137,33072,36001,38068,
#Partially deleted in new
chr7	107580260	107629170	chr7:107580260-107629170	0	+	107580772	107595874	789624	7	41,106,101,136,109,101,349,	0,498,3621,15606,20136,33071,48561,
#Partially deleted in new
chr7	107580264	107618664	chr7:107580264-107618664	1	+	107580772	107618605	0	9	37,106,101,151,136,109,101,79,337,	0,494,3617,13690,15602,20132,33067,33389,38063,
#Partially deleted in new
chr7	107580265	107613433	chr7:107580265-107613433	0	+	107580772	107600267	789624	8	36,106,101,151,136,71,109,102,	0,493,3616,13689,15601,19966,20131,33066,
#Partially deleted in new
chr7	107580271	107600505	chr7:107580271-107600505	0	+	107580772	107600505	789624	6	30,219,101,151,136,109,	0,374,3610,13683,15595,20125,
#Partially deleted in new
chr7	107580305	107595921	chr7:107580305-107595921	0	+	107580772	107595921	789624	5	61,106,101,151,55,	0,453,3576,13649,15561,
#Partially deleted in new
chr7	107580351	107613432	chr7:107580351-107613432	0	+	107580772	107613432	789624	7	294,106,101,151,136,109,101,	0,407,3530,13603,15515,20045,32980,
#Partially deleted in new
chr7	107580454	107619446	chr7:107580454-107619446	1	+	107580772	107618363	0	8	123,106,101,151,136,109,101,1119,	0,304,3427,13500,15412,19942,32877,37873,
#Partially deleted in new
chr7	107580467	107583982	chr7:107580467-107583982	0	+	107580772	107583982	789624	2	397,101,	0,3414,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	107580758	107623317	chr7:107580758-107623317	1	+	107580772	107618605	0	8	106,101,151,136,109,101,79,4990,	0,3123,13196,15108,19638,32573,32895,37569,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	107583918	107621953	chr7:107583918-107621953	0	+	107583918	107621953	789624	6	64,151,136,109,101,324,	0,10036,11948,16478,29413,37711,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	107594021	107615874	chr7:107594021-107615874	0	+	107594021	107615305	789624	5	84,136,109,101,629,	0,1845,6375,19310,21224,
#Partially deleted in new
chr7	107595832	107600435	chr7:107595832-107600435	0	+	107595832	107595832	8553170	2	170,39,	0,4564,
#Deleted in new
chr7	107603362	107603507	chr7:107603362-107603507	3	+	107603362	107603362	8553170	1	145,	0,
#Deleted in new
chr7	107628552	107629550	chr7:107628552-107629550	7	+	107628552	107628552	16724991	1	998,	0,
#Partially deleted in new
chr7	107642764	107643023	chr7:107642764-107643023	7	-	107642764	107642764	16724991	1	259,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	107653967	107662065	chr7:107653967-107662065	0	-	107653967	107653967	8553170	5	266,217,113,157,42,	0,1128,2154,7634,8056,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	107653971	107662064	chr7:107653971-107662064	0	-	107653971	107653971	8553170	4	262,206,157,41,	0,639,7630,8052,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	107653971	107662065	chr7:107653971-107662065	0	-	107653971	107653971	8553170	4	262,173,157,42,	0,672,7630,8052,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	107653975	107662065	chr7:107653975-107662065	0	-	107653975	107653975	8553170	3	258,157,42,	0,7626,8048,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	107653975	107662065	chr7:107653975-107662065	0	-	107653975	107653975	8553170	3	258,217,42,	0,1120,8048,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	107656629	107662065	chr7:107656629-107662065	2	-	107656629	107656629	789624	3	3577,221,42,	0,4972,5394,
#Deleted in new
chr7	107659751	107662065	chr7:107659751-107662065	0	-	107659751	107659751	8553170	3	455,221,42,	0,1850,2272,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr7	107660634	107717809	chr7:107660634-107717809	3	+	107661641	107715446	789624	21	221,167,140,111,185,165,153,83,148,114,78,96,107,70,93,96,231,55,146,84,2387,	0,1004,2661,11503,13529,14310,22567,22820,28418,29489,33768,33986,35298,37407,39448,40466,41192,43696,49419,51904,54788,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr7	107660827	107717782	chr7:107660827-107717782	1	+	107661641	107715446	789624	21	28,167,140,111,185,165,153,83,148,114,78,96,107,70,93,96,231,55,146,84,2360,	0,811,2468,11310,13336,14117,22374,22627,28225,29296,33575,33793,35105,37214,39255,40273,40999,43503,49226,51711,54595,
#Partially deleted in new
chr7	107661003	107672226	chr7:107661003-107672226	0	+	107661641	107672226	789624	4	204,167,140,89,	0,635,2292,11134,
#Deleted in new
chr7	107661300	107662151	chr7:107661300-107662151	1	-	107661300	107661300	8553170	2	458,128,	0,723,
#Partially deleted in new
chr7	107691889	107700175	chr7:107691889-107700175	0	+	107691889	107691889	8553170	5	188,96,107,70,93,	0,2731,4043,6152,8193,
#Partially deleted in new
chr7	107691945	107696039	chr7:107691945-107696039	0	+	107691945	107691945	8553170	5	132,146,78,96,107,	0,1606,2457,2675,3987,
#Partially deleted in new
chr7	107692947	107701884	chr7:107692947-107701884	0	+	107692947	107692947	8553170	8	112,78,96,107,70,93,96,58,	0,1455,1673,2985,5094,7135,8153,8879,
#Partially deleted in new
chr7	107693331	107695964	chr7:107693331-107695964	0	+	107693331	107693331	8553170	4	366,78,96,32,	0,1071,1289,2601,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	107694428	107717352	chr7:107694428-107717352	0	+	107694428	107710062	789624	10	52,96,107,70,93,96,231,146,84,1930,	0,192,1504,3613,5654,6672,7398,15625,18110,20994,
#Partially deleted in new
chr7	107700085	107715513	chr7:107700085-107715513	0	+	107700085	107700085	8553170	6	90,231,55,45,84,91,	0,1741,4245,10069,12453,15337,
#Deleted in new
chr7	107742816	107744128	chr7:107742816-107744128	3	-	107742816	107742816	8553170	2	587,70,	0,1242,
#Deleted in new
chr7	107742961	107744581	chr7:107742961-107744581	0	-	107742961	107742961	8553170	2	442,209,	0,1411,
#Deleted in new
chr7	107742968	107744050	chr7:107742968-107744050	0	-	107742968	107742968	8553170	2	435,118,	0,964,
#Partially deleted in new
chr7	107743696	107761667	chr7:107743696-107761667	3	+	107744163	107759178	789624	6	480,168,101,84,74,3525,	0,5183,9714,10198,11721,14446,
#Partially deleted in new
chr7	107743948	107749316	chr7:107743948-107749316	0	+	107743948	107743948	8553170	2	228,437,	0,4931,
#Partially deleted in new
chr7	107744141	107759686	chr7:107744141-107759686	1	+	107744163	107759178	789624	6	35,168,98,84,74,1544,	0,4738,9272,9753,11276,14001,
#Partially deleted in new
chr7	107744141	107758180	chr7:107744141-107758180	0	+	107744163	107752567	789624	7	35,168,73,101,84,74,38,	0,4738,8403,9269,9753,11276,14001,
#Partially deleted in new
chr7	107744144	107755592	chr7:107744144-107755592	0	+	107744144	107744144	8553170	5	32,168,101,84,175,	0,4735,9266,9750,11273,
#Partially deleted in new
chr7	107744144	107754183	chr7:107744144-107754183	0	+	107744144	107744144	8553170	4	32,168,98,289,	0,4735,9269,9750,
#Partially deleted in new
chr7	107744154	107758571	chr7:107744154-107758571	1	+	107744163	107758148	789624	5	22,168,101,84,429,	0,4725,9256,9740,13988,
#Partially deleted in new
chr7	107744436	107758820	chr7:107744436-107758820	0	+	107749016	107758820	789624	6	401,168,101,84,74,678,	0,4443,8974,9458,10981,13706,
#Partially deleted in new
chr7	107765466	107803225	chr7:107765466-107803225	0	-	107793803	107794509	789624	20	412,66,143,55,96,93,70,107,96,78,114,148,83,153,165,188,111,90,219,115,	0,2112,2299,6587,9310,10985,11170,12708,14201,17330,17513,17738,21360,21890,24057,25581,26363,28275,28912,37644,
#Partially deleted in new
chr7	107765471	107803207	chr7:107765471-107803207	3	-	107765854	107794509	789624	21	407,66,143,55,234,96,93,70,107,96,78,114,148,83,153,165,188,111,140,219,97,	0,2107,2294,6582,8448,9305,10980,11165,12703,14196,17325,17508,17733,21355,21885,24052,25576,26358,28270,28907,37639,
#Deleted in new
chr7	107776014	107776752	chr7:107776014-107776752	0	-	107776014	107776014	8553170	2	530,116,	0,622,
#Partially deleted in new
chr7	107782829	107787522	chr7:107782829-107787522	0	-	107782829	107782829	8553170	5	45,114,148,83,166,	0,150,375,3997,4527,
#Partially deleted in new
chr7	107791851	107803225	chr7:107791851-107803225	0	-	107791851	107794509	789624	4	89,140,219,104,	0,1890,2527,11270,
#Deleted in new
chr7	107808733	107809568	chr7:107808733-107809568	7	+	107808733	107808733	16724991	1	835,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	107890969	107921203	chr7:107890969-107921203	3	+	107891250	107919259	0	14	320,79,80,69,70,101,144,102,191,171,190,138,90,2010,	0,2230,10768,11355,12508,13988,14391,15297,24536,25824,26303,26954,28040,28224,
#Partially deleted in new
chr7	107891161	107893554	chr7:107891161-107893554	0	+	107891161	107891161	8553170	2	128,355,	0,2038,
#Partially deleted in new
chr7	107891163	107919593	chr7:107891163-107919593	0	+	107891250	107903536	789624	12	126,79,70,101,144,102,191,171,190,138,90,400,	0,2036,12314,13794,14197,15103,24342,25630,26109,26760,27846,28030,
#Partially deleted in new
chr7	107891163	107931730	chr7:107891163-107931730	0	+	107891250	107919259	0	15	126,79,80,69,70,101,144,102,191,171,190,138,90,190,300,	0,2036,10574,11161,12314,13794,14197,15103,24342,25630,26109,26760,27846,28030,40267,
#Partially deleted in new
chr7	107891171	107903569	chr7:107891171-107903569	1	+	107891250	107903569	789624	6	118,79,80,69,70,5,	0,2028,10566,11153,12306,12393,
#Partially deleted in new
chr7	107891172	107919713	chr7:107891172-107919713	1	+	107891250	107919259	789624	13	117,79,80,70,101,144,102,191,171,190,138,90,520,	0,2027,10565,12305,13785,14188,15094,24333,25621,26100,26751,27837,28021,
#Partially deleted in new
chr7	107891173	107919655	chr7:107891173-107919655	1	+	107891250	107919259	0	13	116,79,80,69,70,101,102,191,171,190,138,90,462,	0,2026,10564,11151,12304,13784,15093,24332,25620,26099,26750,27836,28020,
#Partially deleted in new
chr7	107891185	107905058	chr7:107891185-107905058	0	+	107891250	107904670	789624	7	104,79,80,69,70,84,196,	0,2014,10552,11139,12292,13477,13677,
#Partially deleted in new
chr7	107891185	107915595	chr7:107891185-107915595	0	+	107891250	107904873	789624	9	104,79,80,69,70,196,144,98,90,	0,2014,10552,11139,12292,13677,14175,15085,24320,
#Partially deleted in new
chr7	107891185	107904997	chr7:107891185-107904997	0	+	107891185	107891185	8553170	6	104,79,80,69,70,135,	0,2014,10552,11139,12292,13677,
#Partially deleted in new
chr7	107891216	107903776	chr7:107891216-107903776	0	+	107891216	107891216	8553170	5	73,79,80,69,299,	0,1983,10521,11108,12261,
#Partially deleted in new
chr7	107891429	107905389	chr7:107891429-107905389	0	+	107891429	107891429	8553170	7	184,79,80,69,70,196,29,	0,1770,10308,10895,12048,13433,13931,
#Deleted in new
chr7	107903502	107905763	chr7:107903502-107905763	0	+	107903502	107903502	8553170	3	45,101,403,	0,1455,1858,
#Partially deleted in new
chr7	107904667	107906369	chr7:107904667-107906369	0	+	107904667	107904667	8553170	3	391,144,103,	0,693,1599,
#Partially deleted in new
chr7	107923798	107929977	chr7:107923798-107929977	0	-	107923798	107923798	8553170	4	289,160,177,914,	0,431,2384,5265,
#Partially deleted in new
chr7	107923802	108002027	chr7:107923802-108002027	1	-	107923950	108001842	789624	32	285,160,177,142,208,145,204,242,185,370,97,215,225,164,232,144,205,124,128,159,136,80,113,180,189,121,203,64,189,74,136,470,	0,427,2380,5261,5609,7553,8371,11612,13290,16186,27423,28206,29727,31664,35446,35888,36642,37403,37746,39102,40749,49189,51183,51431,51886,54244,56806,62219,62372,71084,74554,77755,
#Partially deleted in new
chr7	107923817	108003255	chr7:107923817-108003255	3	-	107923950	108002885	0	34	270,160,177,142,208,145,204,242,185,370,97,215,225,164,232,144,205,124,128,159,136,80,113,180,189,121,203,64,189,74,136,176,123,145,	0,412,2365,5246,5594,7538,8356,11597,13275,16171,27408,28191,29712,31649,35431,35873,36627,37388,37731,39087,40734,49174,51168,51416,51871,54229,56791,62204,62357,71069,74539,77740,79031,79293,
#Partially deleted in new
chr7	107929448	107937159	chr7:107929448-107937159	0	-	107929448	107929448	8553170	5	171,145,320,242,67,	0,1907,2725,5966,7644,
#Deleted in new
chr7	107931356	107932624	chr7:107931356-107932624	0	-	107931356	107931356	8553170	2	144,451,	0,817,
#Partially deleted in new
chr7	107935355	107937170	chr7:107935355-107937170	0	-	107935355	107935355	8553170	2	301,78,	0,1737,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	107935373	107937163	chr7:107935373-107937163	0	-	107935373	107935373	8553170	3	283,95,71,	0,905,1719,
#Deleted in new
chr7	107937089	107940564	chr7:107937089-107940564	0	-	107937089	107937089	8553170	2	188,576,	0,2899,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	107942115	107942740	chr7:107942115-107942740	3	+	107942115	107942115	8553170	1	625,	0,
#Partially deleted in new
chr7	107942398	107953649	chr7:107942398-107953649	0	-	107942398	107942398	8553170	4	221,97,215,120,	0,8827,9610,11131,
#Deleted in new
chr7	107951100	107952090	chr7:107951100-107952090	0	-	107951100	107951100	8553170	2	222,82,	0,908,
#Partially deleted in new
chr7	107959505	108003187	chr7:107959505-108003187	1	-	107959595	108002885	789624	19	329,205,124,128,159,136,80,113,180,189,121,203,64,189,74,136,176,123,77,	0,939,1700,2043,3399,5046,13486,15480,15728,16183,18541,21103,26516,26669,35381,38851,42052,43343,43605,
#Partially deleted in new
chr7	107998412	108003176	chr7:107998412-108003176	0	-	107998412	108002885	789624	5	80,176,258,123,66,	0,3145,3714,4436,4698,
#Partially deleted in new
chr7	107998430	108003160	chr7:107998430-108003160	0	-	107998430	108002885	789624	3	62,176,312,	0,3127,4418,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	107999790	107999982	chr7:107999790-107999982	3	-	107999790	107999790	8553170	1	192,	0,
#Partially deleted in new
chr7	108023547	108130355	chr7:108023547-108130355	3	-	108024038	108123164	789624	34	631,154,174,139,208,145,204,206,161,376,97,221,225,158,232,144,178,121,116,186,151,80,110,180,189,121,215,64,189,74,136,158,64,50,	0,5495,7258,10660,13840,20204,24360,25778,28549,32084,34284,39226,40213,42214,42821,44468,46160,53396,54653,56053,68078,68789,71680,74855,79496,80951,82269,82961,84083,85623,88263,92456,99583,106758,
#Partially deleted in new
chr7	108023550	108130356	chr7:108023550-108130356	1	-	108024038	108123164	789624	34	628,154,174,139,208,145,204,206,161,376,97,221,225,158,232,144,178,121,116,186,151,80,110,180,189,121,215,64,189,74,136,158,67,51,	0,5492,7255,10657,13837,20201,24357,25775,28546,32081,34281,39223,40210,42211,42818,44465,46157,53393,54650,56050,68075,68786,71677,74852,79493,80948,82266,82958,84080,85620,88260,92453,99580,106755,
#Partially deleted in new
chr7	108023810	108037462	chr7:108023810-108037462	0	-	108023810	108023810	8553170	4	368,154,139,75,	0,5232,10397,13577,
#Partially deleted in new
chr7	108026560	108063899	chr7:108026560-108063899	0	-	108026889	108063899	789624	13	355,154,174,139,208,145,204,206,161,376,97,221,139,	0,2482,4245,7647,10827,17191,21347,22765,25536,29071,31271,36213,37200,
#Partially deleted in new
chr7	108030944	108044270	chr7:108030944-108044270	0	-	108030944	108030944	8553170	5	35,139,208,145,27,	0,3263,6443,12807,13299,
#Partially deleted in new
chr7	108062396	108065858	chr7:108062396-108065858	0	-	108062396	108062396	8553170	3	598,225,97,	0,1364,3365,
#Partially deleted in new
chr7	108062469	108130356	chr7:108062469-108130356	0	-	108062469	108062469	8553170	23	525,225,158,232,144,178,121,116,186,151,80,110,180,189,121,215,64,189,74,136,158,67,51,	0,1291,3292,3899,5546,7238,14474,15731,17131,29156,29867,32758,35933,40574,42029,43347,44039,45161,46701,49341,53534,60661,67836,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr7	108075536	108130355	chr7:108075536-108130355	1	-	108075737	108123164	789624	18	396,121,116,186,151,80,110,180,189,121,215,64,189,74,136,158,64,50,	0,1407,2664,4064,16089,16800,19691,22866,27507,28962,30280,30972,32094,33634,36274,40467,47594,54769,
#Partially deleted in new
chr7	108147622	108156637	chr7:108147622-108156637	0	-	108147622	108147622	8553170	3	2525,59,251,	0,3072,8764,
#Partially deleted in new
chr7	108147625	108456397	chr7:108147625-108456397	3	-	108149909	108240064	0	33	2522,79,132,153,126,36,177,123,205,116,226,71,198,102,30,125,148,167,112,144,132,185,112,57,171,123,197,106,18,212,67,158,155,	0,11837,12735,19295,20651,27696,28804,30364,32597,34196,35069,36615,36791,42019,43628,44103,46398,46636,48135,50330,59902,61795,76099,78019,78582,83405,84700,86957,90126,92333,165039,251810,308617,
#Partially deleted in new
chr7	108147625	108456397	chr7:108147625-108456397	1	-	108149909	108240064	789624	31	2522,79,132,36,177,123,205,116,226,71,198,102,30,125,148,167,112,144,132,185,112,57,171,123,197,106,18,212,67,158,155,	0,11837,12735,27696,28804,30364,32597,34196,35069,36615,36791,42019,43628,44103,46398,46636,48135,50330,59902,61795,76099,78019,78582,83405,84700,86957,90126,92333,165039,251810,308617,
#Partially deleted in new
chr7	108147661	108456339	chr7:108147661-108456339	1	-	108149909	108240064	0	28	2486,79,132,177,123,205,116,226,71,198,102,125,148,167,112,144,132,185,112,57,171,123,197,106,212,67,158,97,	0,11801,12699,28768,30328,32561,34160,35033,36579,36755,41983,44067,46362,46600,48099,50294,59866,61759,76063,77983,78546,83369,84664,86921,92297,165003,251774,308581,
#Partially deleted in new
chr7	108148116	108456321	chr7:108148116-108456321	1	-	108149909	108240064	0	30	2031,79,132,36,177,123,205,116,226,71,198,102,30,125,148,167,112,144,132,185,112,171,123,197,106,18,212,67,158,79,	0,11346,12244,27205,28313,29873,32106,33705,34578,36124,36300,41528,43137,43612,45907,46145,47644,49839,59411,61304,75608,78091,82914,84209,86466,89635,91842,164548,251319,308126,
#Partially deleted in new
chr7	108149909	108240049	chr7:108149909-108240049	1	-	108149909	108240049	789624	31	238,79,132,153,126,36,177,123,205,116,226,71,187,11,102,30,125,148,167,112,144,132,185,112,57,171,123,197,106,18,91,	0,9553,10451,17011,18367,25412,26520,28080,30313,31912,32785,34331,34507,34695,39735,41344,41819,44114,44352,45851,48046,57618,59511,73815,75735,76298,81121,82416,84673,87842,90049,
#Partially deleted in new
chr7	108149909	108240064	chr7:108149909-108240064	1	-	108149909	108240064	0	30	238,79,132,153,126,36,177,123,205,116,226,71,198,102,30,125,148,167,112,144,132,185,112,57,171,123,197,106,18,106,	0,9553,10451,17011,18367,25412,26520,28080,30313,31912,32785,34331,34507,39735,41344,41819,44114,44352,45851,48046,57618,59511,73815,75735,76298,81121,82416,84673,87842,90049,
#Partially deleted in new
chr7	108149951	108175357	chr7:108149951-108175357	0	-	108149951	108175357	789624	5	196,79,132,126,36,	0,9511,10409,18325,25370,
#Partially deleted in new
chr7	108150048	108176773	chr7:108150048-108176773	0	-	108150048	108150048	8553170	5	99,79,132,177,67,	0,9414,10312,26381,26658,
#Partially deleted in new
chr7	108156386	108178114	chr7:108156386-108178114	0	-	108156386	108156386	8553170	5	62,79,132,177,125,	0,3076,3974,20043,21603,
#Partially deleted in new
chr7	108178149	108456385	chr7:108178149-108456385	1	-	108178384	108240064	789624	22	256,39,71,198,102,125,148,167,112,144,132,185,112,57,171,123,197,106,212,67,158,143,	0,4732,6091,6267,11495,13579,15874,16112,17611,19806,29378,31271,45575,47495,48058,52881,54176,56433,61809,134515,221286,278093,
#Partially deleted in new
chr7	108197994	108243240	chr7:108197994-108243240	0	-	108197994	108240064	789624	11	105,132,185,112,57,171,123,197,106,212,194,	0,9533,11426,25730,27650,28213,33036,34331,36588,41964,45052,
#Partially deleted in new
chr7	108207227	108209603	chr7:108207227-108209603	0	-	108207227	108207227	8553170	2	432,183,	0,2193,
#Partially deleted in new
chr7	108232398	108328488	chr7:108232398-108328488	0	-	108232398	108240064	789624	6	124,106,18,212,67,68,	0,2184,5353,7560,80266,96022,
#Partially deleted in new
chr7	108232416	108313295	chr7:108232416-108313295	0	-	108232416	108240064	789624	5	106,106,212,67,92,	0,2166,7542,80248,80787,
#Partially deleted in new
chr7	108232416	108328655	chr7:108232416-108328655	0	-	108232416	108240064	789624	5	106,106,212,67,235,	0,2166,7542,80248,96004,
#Partially deleted in new
chr7	108234629	108456717	chr7:108234629-108456717	0	-	108234629	108240064	789624	6	59,18,212,67,158,48,	0,3122,5329,78035,164806,222040,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	108470421	108526071	chr7:108470421-108526071	1	-	108472400	108515491	789624	10	2254,196,9,58,172,95,152,150,1139,43,	0,8762,17523,20988,26162,27061,32069,43722,44014,55607,
#Partially deleted in new
chr7	108471554	108526194	chr7:108471554-108526194	1	-	108472400	108515491	789624	11	1121,196,195,58,172,95,152,150,1139,46,166,	0,7629,16204,19855,25029,25928,30936,42589,42881,49921,54474,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	108471626	108526194	chr7:108471626-108526194	1	-	108472400	108515491	789624	12	1049,196,195,58,172,95,152,150,1139,112,46,166,	0,7557,16132,19783,24957,25856,30864,42517,42809,46563,49849,54402,
#Partially deleted in new
chr7	108471626	108526315	chr7:108471626-108526315	1	-	108472400	108515191	789624	10	1049,196,195,58,172,95,152,150,1012,287,	0,7557,16132,19783,24957,25856,30864,42517,42809,54402,
#Partially deleted in new
chr7	108471660	108526318	chr7:108471660-108526318	3	-	108472400	108515491	789624	10	1015,196,195,58,172,95,152,150,1139,290,	0,7523,16098,19749,24923,25822,30830,42483,42775,54368,
#Partially deleted in new
chr7	108472530	108528161	chr7:108472530-108528161	0	-	108472530	108515191	789624	11	145,196,195,58,172,95,152,150,1012,46,105,	0,6653,15228,18879,24053,24952,29960,41613,41905,48945,55526,
#Partially deleted in new
chr7	108496426	108526163	chr7:108496426-108526163	0	-	108496426	108496426	8553170	4	329,95,152,135,	0,1056,6064,29602,
#Partially deleted in new
chr7	108496584	108526120	chr7:108496584-108526120	0	-	108496584	108496584	8553170	5	171,95,152,150,92,	0,898,5906,17559,29444,
#Partially deleted in new
chr7	108496591	108502788	chr7:108496591-108502788	0	-	108496591	108496591	8553170	3	164,95,298,	0,891,5899,
#Partially deleted in new
chr7	108497480	108569666	chr7:108497480-108569666	0	-	108497480	108497480	8553170	3	97,152,177,	0,5010,72009,
#Deleted in new
chr7	108510232	108510976	chr7:108510232-108510976	7	+	108510232	108510232	16724991	1	744,	0,
#Partially deleted in new
chr7	108514913	108526123	chr7:108514913-108526123	0	-	108514913	108515491	789624	2	661,74,	0,11136,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	108515326	108527935	chr7:108515326-108527935	0	-	108515326	108515491	789624	3	248,98,222,	0,2863,12387,
#Partially deleted in new
chr7	108554542	108569597	chr7:108554542-108569597	2	-	108554542	108554542	8553170	2	317,108,	0,14947,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	108562226	108569723	chr7:108562226-108569723	1	-	108564190	108569569	789624	3	2879,193,234,	0,3603,7263,
#Partially deleted in new
chr7	108564085	108569453	chr7:108564085-108569453	1	-	108564190	108565976	789624	3	1020,193,355,	0,1744,5013,
#Partially deleted in new
chr7	108564381	108569645	chr7:108564381-108569645	0	-	108564381	108564381	8553170	2	724,156,	0,5108,
#Partially deleted in new
chr7	108564569	108569750	chr7:108564569-108569750	1	-	108565088	108569569	789624	3	536,71,261,	0,1382,4920,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	108564992	108569669	chr7:108564992-108569669	0	-	108564992	108564992	8553170	4	113,193,297,180,	0,837,3289,4497,
#Partially deleted in new
chr7	108564992	108569256	chr7:108564992-108569256	0	-	108564992	108564992	8553170	3	113,71,158,	0,959,4106,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	108565170	108569688	chr7:108565170-108569688	0	-	108565170	108565170	8553170	2	852,199,	0,4319,
#Deleted in new
chr7	108569567	108574850	chr7:108569567-108574850	3	+	108571726	108573353	0	3	536,227,1952,	0,2149,3331,
#Deleted in new
chr7	108569866	108572063	chr7:108569866-108572063	0	+	108569866	108569866	8553170	2	237,347,	0,1850,
#Deleted in new
chr7	108571714	108574760	chr7:108571714-108574760	0	+	108571714	108571714	8553170	2	229,114,	0,2932,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	108598374	108614267	chr7:108598374-108614267	3	+	108598374	108598374	8553170	4	51,146,133,335,	0,3058,4761,15558,
#Deleted in new
chr7	108720607	108721601	chr7:108720607-108721601	7	-	108720607	108720607	16724991	1	994,	0,
#Deleted in new
chr7	108883974	108884587	chr7:108883974-108884587	3	-	108883974	108883974	8553170	2	275,160,	0,453,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	108900104	108905226	chr7:108900104-108905226	3	-	108900104	108900104	8553170	1	5122,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	108909452	108952666	chr7:108909452-108952666	3	+	108909452	108909452	8553170	4	75,79,129,255,	0,37507,39896,42959,
#Deleted in new
chr7	108994030	108995029	chr7:108994030-108995029	7	-	108994030	108994030	16724991	1	999,	0,
#Partially deleted in new
chr7	109322319	109326315	chr7:109322319-109326315	3	-	109322319	109322319	8553170	2	294,104,	0,3892,
#Duplicated in new
chr7	109521980	109597166	chr7:109521980-109597166	3	-	109521980	109521980	8553170	4	89,91,82,126,	0,40764,43270,75060,
#Deleted in new
chr7	109660093	109660802	chr7:109660093-109660802	7	+	109660093	109660093	16724991	1	709,	0,
#Deleted in new
chr7	109763573	109764357	chr7:109763573-109764357	7	+	109763573	109763573	16724991	1	784,	0,
#Deleted in new
chr7	109959217	109960184	chr7:109959217-109960184	7	-	109959217	109959217	16724991	1	967,	0,
#Deleted in new
chr7	109998433	109999624	chr7:109998433-109999624	7	-	109998433	109998433	16724991	1	1191,	0,
#Partially deleted in new
chr7	110215890	110216380	chr7:110215890-110216380	7	+	110215890	110215890	16724991	1	490,	0,
#Partially deleted in new
chr7	110663050	111562291	chr7:110663050-111562291	1	-	110663601	111521447	789624	6	671,103,66,104,137,441,	0,223542,300449,824187,858262,898800,
#Partially deleted in new
chr7	110663053	111562517	chr7:110663053-111562517	3	-	110663601	111521447	789624	7	668,103,66,104,137,73,54,	0,223539,300446,824184,858259,898797,899410,
#Partially deleted in new
chr7	110663207	110963565	chr7:110663207-110963565	0	-	110663207	110663207	8553170	2	514,66,	0,300292,
#Partially deleted in new
chr7	110663300	111390750	chr7:110663300-111390750	0	-	110663300	110663300	8553170	4	421,189,66,180,	0,1523,300199,727270,
#Partially deleted in new
chr7	110663415	111562487	chr7:110663415-111562487	1	-	110663601	111521447	789624	7	306,103,66,104,137,73,44,	0,223177,300084,823822,857897,898435,899028,
#Partially deleted in new
chr7	110663425	111392915	chr7:110663425-111392915	1	-	110663601	111392804	789624	5	296,103,66,182,114,	0,223167,300074,728412,729376,
#Deleted in new
chr7	110724158	110725825	chr7:110724158-110725825	3	-	110724158	110724158	8553170	2	433,124,	0,1543,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	110962307	111561924	chr7:110962307-111561924	1	-	110963062	111521447	789624	5	783,66,104,137,74,	0,1192,524930,559005,599543,
#Partially deleted in new
chr7	111091005	111124932	chr7:111091005-111124932	1	+	111122772	111124899	789624	3	499,82,2518,	0,8875,31409,
#Partially deleted in new
chr7	111091005	111125451	chr7:111091005-111125451	3	+	111122772	111124899	789624	4	499,107,82,3037,	0,6021,8875,31409,
#Partially deleted in new
chr7	111091031	111125454	chr7:111091031-111125454	1	+	111122772	111124899	789624	2	473,3040,	0,31383,
#Partially deleted in new
chr7	111091042	111123593	chr7:111091042-111123593	0	+	111122772	111123593	789624	4	462,107,82,1179,	0,5984,8838,31372,
#Deleted in new
chr7	111091093	111097316	chr7:111091093-111097316	0	+	111091093	111091093	8553170	2	411,147,	0,6076,
#Deleted in new
chr7	111394874	111395043	chr7:111394874-111395043	7	+	111394874	111394874	16724991	1	169,	0,
#Deleted in new
chr7	111411318	111411883	chr7:111411318-111411883	7	+	111411318	111411318	16724991	1	565,	0,
#Partially deleted in new
chr7	111483433	111561901	chr7:111483433-111561901	0	-	111483433	111483433	8553170	4	295,104,137,51,	0,3804,37879,78417,
#Partially deleted in new
chr7	111487233	111521447	chr7:111487233-111521447	1	-	111487233	111521447	789624	2	108,135,	0,34079,
#Partially deleted in new
chr7	111487239	111562504	chr7:111487239-111562504	0	-	111487239	111521447	789624	5	102,137,68,73,41,	0,34073,45278,74611,75224,
#Partially deleted in new
chr7	111726109	111877128	chr7:111726109-111877128	0	-	111728273	111877128	789624	36	2611,62,73,110,82,121,122,120,84,177,87,167,142,105,87,149,94,61,96,27,86,149,59,101,76,95,99,135,128,193,171,82,101,84,98,99,	0,6116,10807,13024,13286,14984,15430,15903,20224,21157,29405,32514,34071,39008,40922,43419,52166,56754,57747,57987,62552,64347,82711,83191,85764,96252,108478,118653,120889,137262,141874,143464,145880,146159,146357,150920,
#Partially deleted in new
chr7	111726477	112206411	chr7:111726477-112206411	1	-	111728273	112206138	789624	53	2243,62,114,73,110,82,121,122,120,84,177,87,167,142,105,87,149,94,61,96,27,86,149,59,101,76,95,99,135,128,193,171,82,101,84,98,157,107,163,125,126,89,133,61,82,152,85,149,97,56,41,84,310,	0,5748,8576,10439,12656,12918,14616,15062,15535,19856,20789,29037,32146,33703,38640,40554,43051,51798,56386,57379,57619,62184,63979,82343,82823,85396,95884,108110,118285,120521,136894,141506,143096,145512,145791,145989,150552,169134,173896,175199,189301,209062,213632,218333,219239,250654,257828,262537,267657,271970,274016,277570,479624,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	111726746	111740214	chr7:111726746-111740214	0	-	111726746	111726746	8553170	5	1974,62,114,73,1081,	0,5479,8307,10170,12387,
#Partially deleted in new
chr7	111728219	112206395	chr7:111728219-112206395	3	-	111728273	112206138	789624	52	501,62,114,73,110,82,121,122,120,84,177,87,167,142,105,87,149,94,61,96,86,149,59,101,76,95,99,135,128,193,171,82,101,84,98,157,107,163,125,126,89,133,61,82,152,85,149,97,56,41,84,294,	0,4006,6834,8697,10914,11176,12874,13320,13793,18114,19047,27295,30404,31961,36898,38812,41309,50056,54644,55637,60442,62237,80601,81081,83654,94142,106368,116543,118779,135152,139764,141354,143770,144049,144247,148810,167392,172154,173457,187559,207320,211890,216591,217497,248912,256086,260795,265915,270228,272274,275828,477882,
#Partially deleted in new
chr7	111728273	112004131	chr7:111728273-112004131	0	-	111728273	112004131	789624	53	447,62,114,73,110,82,121,122,120,84,177,87,167,142,105,87,149,94,61,96,27,86,149,59,101,76,95,99,108,135,128,193,171,82,101,84,98,157,107,163,125,126,89,133,61,82,152,85,149,97,56,41,84,	0,3952,6780,8643,10860,11122,12820,13266,13739,18060,18993,27241,30350,31907,36844,38758,41255,50002,54590,55583,55823,60388,62183,80547,81027,83600,94088,106314,112489,116489,118725,135098,139710,141300,143716,143995,144193,148756,167338,172100,173403,187505,207266,211836,216537,217443,248858,256032,260741,265861,270174,272220,275774,
#Partially deleted in new
chr7	111728420	111732514	chr7:111728420-111732514	0	-	111728420	111728420	8553170	2	300,289,	0,3805,
#Partially deleted in new
chr7	111760223	111784426	chr7:111760223-111784426	0	-	111778347	111784406	789624	7	99,105,87,149,94,96,43,	0,4894,6808,9305,18052,23633,24160,
#Partially deleted in new
chr7	111765154	111784428	chr7:111765154-111784428	0	-	111765154	111784406	789624	7	68,87,149,94,61,96,45,	0,1877,4374,13121,17709,18702,19229,
#Partially deleted in new
chr7	111765195	111784479	chr7:111765195-111784479	0	-	111765195	111784406	789624	8	27,87,149,94,61,96,27,96,	0,1836,4333,13080,17668,18661,18901,19188,
#Partially deleted in new
chr7	111767080	111789260	chr7:111767080-111789260	0	-	111767080	111767080	8553170	7	38,149,94,61,96,86,26,	0,2448,11195,15783,16776,21581,22154,
#Partially deleted in new
chr7	111769656	111789024	chr7:111769656-111789024	0	-	111769656	111788756	789624	6	21,94,61,96,27,363,	0,8619,13207,14200,14440,19005,
#Partially deleted in new
chr7	111778326	111788920	chr7:111778326-111788920	0	-	111778326	111778326	8553170	4	43,61,96,259,	0,4537,5530,10335,
#Partially deleted in new
chr7	111788500	111822424	chr7:111788500-111822424	0	-	111788500	111788500	8553170	6	247,149,59,101,76,63,	0,1956,20320,20800,23373,33861,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr7	111801685	112004132	chr7:111801685-112004132	1	-	111801685	112004132	789624	34	50,74,4,8,12,63,101,76,95,99,135,128,193,171,82,101,84,98,157,107,163,125,126,89,133,61,82,152,85,149,97,56,41,85,	0,5835,6210,6492,7066,7131,7615,10188,20676,32902,43077,45313,61686,66298,67888,70304,70583,70781,75344,93926,98688,99991,114093,133854,138424,143125,144031,175446,182620,187329,192449,196762,198808,202362,
#Partially deleted in new
chr7	111808515	111821773	chr7:111808515-111821773	3	+	111808515	111808515	789624	2	98,2396,	0,10862,
#Partially deleted in new
chr7	111862882	112206394	chr7:111862882-112206394	0	-	111862882	111862882	8553170	23	682,171,82,101,84,98,157,107,163,125,126,89,133,61,82,152,85,149,97,56,41,84,293,	0,5101,6691,9107,9386,9584,14147,32729,37491,38794,52896,72657,77227,81928,82834,114249,121423,126132,131252,135565,137611,141165,343219,
#Partially deleted in new
chr7	111869459	111872347	chr7:111869459-111872347	0	-	111869459	111869459	8553170	3	196,101,79,	0,2530,2809,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	111953652	111953765	chr7:111953652-111953765	7	-	111953652	111953652	16724991	1	113,	0,
#Deleted in new
chr7	111971221	111971988	chr7:111971221-111971988	7	-	111971221	111971221	16724991	1	767,	0,
#Partially deleted in new
chr7	111976537	112004132	chr7:111976537-112004132	0	-	111976537	111976537	8553170	7	746,85,149,97,56,41,85,	0,7768,12477,17597,21910,23956,27510,
#Partially deleted in new
chr7	112206587	112343096	chr7:112206587-112343096	3	+	112206716	112342729	789624	12	220,202,89,83,92,111,133,68,97,43,175,536,	0,80285,89281,89641,111594,121129,123496,129516,131142,133255,134284,135973,
#Partially deleted in new
chr7	112206694	112343094	chr7:112206694-112343094	0	+	112206716	112286938	789624	12	113,198,89,83,92,111,133,68,97,43,175,534,	0,80182,89174,89534,111487,121022,123389,129409,131035,133148,134177,135866,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	112206696	112288979	chr7:112206696-112288979	1	+	112206716	112287078	789624	2	111,2107,	0,80176,
#Partially deleted in new
chr7	112206696	112337820	chr7:112206696-112337820	0	+	112206716	112296259	789624	8	111,202,83,92,111,133,68,91,	0,80176,89532,111485,121020,123387,129407,131033,
#Partially deleted in new
chr7	112206697	112336164	chr7:112206697-112336164	0	+	112206716	112336164	789624	5	110,202,111,133,61,	0,80175,121019,123386,129406,
#Partially deleted in new
chr7	112206700	112330474	chr7:112206700-112330474	1	+	112206716	112330288	789624	7	107,202,89,83,92,111,391,	0,80172,89168,89528,111481,121016,123383,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	112288622	112288952	chr7:112288622-112288952	3	+	112288622	112288622	8553170	1	330,	0,
#Partially deleted in new
chr7	112328188	112409623	chr7:112328188-112409623	3	-	112328188	112328188	8553170	4	210,166,70,115,	0,56750,70970,81320,
#Partially deleted in new
chr7	112328256	112350541	chr7:112328256-112350541	0	-	112328256	112328256	8553170	3	142,68,78,	0,12798,22207,
#Partially deleted in new
chr7	112337727	112343023	chr7:112337727-112343023	0	+	112337727	112342729	789624	4	99,43,46,463,	0,2115,3144,4833,
#Deleted in new
chr7	112372646	112373729	chr7:112372646-112373729	7	+	112372646	112372646	16724991	1	1083,	0,
#Deleted in new
chr7	112373732	112374250	chr7:112373732-112374250	7	-	112373732	112373732	16724991	1	518,	0,
#Deleted in new
chr7	112374323	112375429	chr7:112374323-112375429	7	+	112374323	112374323	16724991	1	1106,	0,
#Partially deleted in new
chr7	112422967	112450780	chr7:112422967-112450780	0	+	112450688	112450780	789624	3	236,65,273,	0,400,27540,
#Partially deleted in new
chr7	112423143	112475527	chr7:112423143-112475527	3	+	112450688	112475519	789624	13	289,275,105,85,125,158,51,179,109,135,129,96,98,	0,27364,32619,32858,33770,35717,38722,38857,39126,44837,49075,49622,52286,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	112423143	112477200	chr7:112423143-112477200	1	+	112455818	112475519	789624	12	289,105,85,125,158,51,179,109,135,129,96,1771,	0,32619,32858,33770,35717,38722,38857,39126,44837,49075,49622,52286,
#Partially deleted in new
chr7	112435447	112456073	chr7:112435447-112456073	0	+	112455818	112456073	789624	4	174,89,105,72,	0,1748,20315,20554,
#Deleted in new
chr7	112446163	112446375	chr7:112446163-112446375	7	-	112446163	112446163	16724991	1	212,	0,
#Partially deleted in new
chr7	112450048	112455855	chr7:112450048-112455855	0	+	112450688	112455855	789624	3	272,205,93,	0,529,5714,
#Deleted in new
chr7	112450125	112450741	chr7:112450125-112450741	0	+	112450688	112450741	789624	2	195,234,	0,382,
#Partially deleted in new
chr7	112450427	112476192	chr7:112450427-112476192	1	+	112450688	112475519	789624	12	355,105,85,125,158,51,179,109,135,129,96,763,	0,5335,5574,6486,8433,11438,11573,11842,17553,21791,22338,25002,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	112450457	112458336	chr7:112450457-112458336	1	+	112450688	112457076	789624	4	325,105,85,1423,	0,5305,5544,6456,
#Partially deleted in new
chr7	112451019	112458912	chr7:112451019-112458912	0	+	112455818	112458912	789624	5	119,105,85,125,52,	0,4743,4982,5894,7841,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	112452057	112458982	chr7:112452057-112458982	0	+	112455818	112458982	789624	5	454,105,85,125,122,	0,3705,3944,4856,6803,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	112452057	112477200	chr7:112452057-112477200	1	+	112455818	112475519	789624	12	454,105,85,125,158,51,179,109,135,129,96,1771,	0,3705,3944,4856,6803,9808,9943,10212,15923,20161,20708,23372,
#Partially deleted in new
chr7	112456995	112468104	chr7:112456995-112468104	0	+	112456995	112456995	8553170	5	43,158,51,179,124,	0,1865,4870,5005,10985,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	112457530	112462122	chr7:112457530-112462122	0	+	112457530	112457530	8553170	4	236,158,51,122,	0,1330,4335,4470,
#Partially deleted in new
chr7	112461331	112472244	chr7:112461331-112472244	0	+	112461331	112461331	8553170	5	585,179,109,135,26,	0,669,938,6649,10887,
#Partially deleted in new
chr7	112467376	112476186	chr7:112467376-112476186	0	+	112467376	112467376	8553170	4	739,129,96,757,	0,4842,5389,8053,
#Partially deleted in new
chr7	112467676	112472861	chr7:112467676-112472861	0	+	112467676	112467676	8553170	3	439,129,96,	0,4542,5089,
#Partially deleted in new
chr7	112468085	112481017	chr7:112468085-112481017	0	+	112468085	112480877	789624	4	30,129,96,182,	0,4133,4680,12750,
#Partially deleted in new
chr7	112480852	112490148	chr7:112480852-112490148	1	+	112484816	112489949	789624	4	130,132,129,339,	0,3959,6070,8957,
#Partially deleted in new
chr7	112480866	112489970	chr7:112480866-112489970	0	+	112484816	112486404	789624	6	116,193,132,88,129,161,	0,2547,3945,5485,6056,8943,
#Partially deleted in new
chr7	112480990	112491062	chr7:112480990-112491062	3	+	112484816	112489949	789624	4	356,132,129,1253,	0,3821,5932,8819,
#Partially deleted in new
chr7	112486122	112489967	chr7:112486122-112489967	0	+	112486122	112486122	8553170	3	317,129,158,	0,800,3687,
#Partially deleted in new
chr7	112486840	112490081	chr7:112486840-112490081	0	+	112486840	112486840	8553170	2	211,272,	0,2969,
#Partially deleted in new
chr7	112520487	112521670	chr7:112520487-112521670	7	+	112520487	112520487	16724991	2	664,202,	0,981,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	112622377	112708080	chr7:112622377-112708080	3	+	112622377	112622377	789624	8	242,108,88,85,57,193,71,344,	0,10180,12901,13460,17784,76952,78989,85359,
#Partially deleted in new
chr7	112735165	112738693	chr7:112735165-112738693	7	-	112735165	112735165	16724991	2	1110,917,	0,2611,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	112762381	112790592	chr7:112762381-112790592	3	-	112767196	112784825	789624	5	5363,275,143,1256,433,	0,10399,12794,21316,27778,
#Partially deleted in new
chr7	112767084	112790393	chr7:112767084-112790393	1	-	112767196	112784825	789624	6	660,275,143,1256,91,234,	0,5696,8091,16613,21369,23075,
#Partially deleted in new
chr7	112767135	112790423	chr7:112767135-112790423	0	-	112767196	112775294	789624	4	609,275,143,264,	0,5645,8040,23024,
#Partially deleted in new
chr7	112767174	112783745	chr7:112767174-112783745	0	-	112767196	112783745	789624	4	570,38,143,48,	0,5606,8001,16523,
#Partially deleted in new
chr7	112772801	112790379	chr7:112772801-112790379	0	-	112772801	112775294	789624	5	254,143,59,99,220,	0,2374,10896,12053,17358,
#Partially deleted in new
chr7	112772945	112790390	chr7:112772945-112790390	0	-	112772945	112783781	789624	4	110,143,86,231,	0,2230,10752,17214,
#Partially deleted in new
chr7	112773014	112778656	chr7:112773014-112778656	0	-	112773014	112773014	8553170	3	41,143,434,	0,2161,5208,
#Partially deleted in new
chr7	112819146	112939916	chr7:112819146-112939916	3	-	112821743	112939750	789624	5	3227,115,171,142,326,	0,13414,76422,96159,120444,
#Partially deleted in new
chr7	112821636	112939618	chr7:112821636-112939618	0	-	112821743	112939618	789624	6	737,115,171,142,78,28,	0,10924,73932,93669,113550,117954,
#Partially deleted in new
chr7	112822352	112939298	chr7:112822352-112939298	0	-	112822352	112822352	8553170	5	21,115,171,142,79,	0,10208,73216,92953,116867,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	112954645	112995634	chr7:112954645-112995634	3	-	112954645	112954645	789624	6	123,181,68,119,129,67,	0,1876,18959,25400,31890,40922,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	112973618	112995627	chr7:112973618-112995627	1	-	112973618	112973618	8553170	5	54,56,119,258,60,	0,3525,6427,7285,21949,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	113075123	113077181	chr7:113075123-113077181	3	-	113075123	113075123	8553170	1	2058,	0,
#Deleted in new
chr7	113078330	113086089	chr7:113078330-113086089	0	-	113083608	113084721	789624	3	2184,1824,98,	0,4737,7661,
#Deleted in new
chr7	113080246	113087755	chr7:113080246-113087755	3	-	113083608	113084721	789624	3	4645,118,316,	0,5745,7193,
#Deleted in new
chr7	113082280	113086487	chr7:113082280-113086487	1	-	113083608	113084721	789624	3	2611,118,166,	0,3711,4041,
#Deleted in new
chr7	113083608	113086338	chr7:113083608-113086338	1	-	113083608	113084721	789624	2	1283,347,	0,2383,
#Deleted in new
chr7	113084357	113086369	chr7:113084357-113086369	0	-	113084357	113084721	789624	2	534,48,	0,1964,
#Deleted in new
chr7	113084508	113086414	chr7:113084508-113086414	0	-	113084508	113084721	789624	3	383,115,93,	0,1483,1813,
#Deleted in new
chr7	113084730	113087778	chr7:113084730-113087778	0	-	113084730	113084730	8553170	3	161,115,339,	0,1261,2709,
#Partially deleted in new
chr7	113100662	113146040	chr7:113100662-113146040	3	+	113100662	113100662	8553170	3	223,50,378,	0,7092,45000,
#Deleted in new
chr7	113116717	113118613	chr7:113116717-113118613	3	-	113117398	113117578	789624	3	890,94,86,	0,1350,1810,
#Deleted in new
chr7	113116860	113118560	chr7:113116860-113118560	1	-	113117398	113117578	789624	3	747,94,121,	0,1207,1579,
#Deleted in new
chr7	113117256	113118534	chr7:113117256-113118534	0	-	113117256	113117256	8553170	2	351,467,	0,811,
#Deleted in new
chr7	113117482	113118554	chr7:113117482-113118554	0	-	113117482	113117482	8553170	2	679,27,	0,1045,
#Deleted in new
chr7	113145015	113146330	chr7:113145015-113146330	1	+	113145015	113145015	8553170	3	143,110,291,	0,650,1024,
#Partially deleted in new
chr7	113415688	113416322	chr7:113415688-113416322	7	+	113415688	113415688	16724991	1	634,	0,
#Partially deleted in new
chr7	113451071	113451402	chr7:113451071-113451402	3	+	113451071	113451071	8553170	1	331,	0,
#Partially deleted in new
chr7	113876776	113919065	chr7:113876776-113919065	3	-	113877722	113918996	789624	4	3349,125,59,851,	0,5262,5485,41438,
#Partially deleted in new
chr7	113879555	114075920	chr7:113879555-114075920	0	-	113879555	113882041	789624	4	570,125,59,295,	0,2483,2706,196070,
#Partially deleted in new
chr7	113879770	113918996	chr7:113879770-113918996	0	-	113918250	113918996	789624	5	355,125,59,83,178,	0,2268,2491,38444,39048,
#Partially deleted in new
chr7	114086326	114690905	chr7:114086326-114690905	0	+	114426511	114538331	0	20	285,91,178,90,58,75,138,51,201,178,214,105,88,84,77,102,122,70,164,1124,	0,201692,340175,448290,451999,484480,542213,543265,543478,545201,556083,558358,565876,567599,573029,573245,575738,577123,577946,603455,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	114086438	114631584	chr7:114086438-114631584	0	+	114426511	114463154	789624	12	173,145,91,178,98,211,90,58,138,51,219,57,	0,76505,201580,340063,376635,412444,448178,451887,542101,543153,543348,545089,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr7	114086559	114669984	chr7:114086559-114669984	0	+	114426511	114538331	0	23	52,145,52,91,136,178,90,58,138,51,201,178,214,105,88,84,155,202,77,102,122,70,5712,	0,76384,198845,201459,279945,339942,448057,451766,541980,543032,543245,544968,555850,558125,565643,567366,569880,571506,572796,573012,575505,576890,577713,
#Partially deleted in new
chr7	114087746	114690035	chr7:114087746-114690035	1	+	114426511	114689926	789624	20	92,145,91,178,90,138,201,3,178,214,105,88,84,202,77,102,122,70,164,254,	0,75197,200272,338755,446870,540793,542058,542864,543781,554663,556938,564456,566179,570319,571609,571825,574318,575703,576526,602035,
#Partially deleted in new
chr7	114088165	114426510	chr7:114088165-114426510	0	+	114088165	114088165	8553170	4	105,145,91,9,	0,74778,199853,338336,
#Partially deleted in new
chr7	114163040	114691745	chr7:114163040-114691745	1	+	114426511	114689926	789624	18	48,91,178,90,138,150,178,214,105,88,84,202,77,102,122,70,164,1964,	0,124978,263461,371576,465499,466815,468487,479369,481644,489162,490885,495025,496315,496531,499024,500409,501232,526741,
#Partially deleted in new
chr7	114288018	114690120	chr7:114288018-114690120	0	+	114426511	114538331	0	19	91,178,90,58,138,201,3,178,214,105,88,84,202,77,102,122,70,164,339,	0,138483,246598,250307,340521,341786,342592,343509,354391,356666,364184,365907,370047,371337,371553,374046,375431,376254,401763,
#Partially deleted in new
chr7	114288030	114663509	chr7:114288030-114663509	0	+	114426511	114663509	789624	16	79,178,90,138,138,3,178,214,105,88,84,202,77,102,122,60,	0,138471,246586,340509,341837,342580,343497,354379,356654,364172,365895,370035,371325,371541,374034,375419,
#Deleted in new
chr7	114297113	114297429	chr7:114297113-114297429	7	-	114297113	114297113	16724991	1	316,	0,
#Deleted in new
chr7	114414243	114419875	chr7:114414243-114419875	3	-	114414243	114414243	8553170	2	541,41,	0,5591,
#Partially deleted in new
chr7	114414273	114690163	chr7:114414273-114690163	3	+	114426511	114689926	0	17	269,178,90,138,201,178,214,105,88,84,202,77,102,122,70,164,382,	0,12228,120343,214266,215531,217254,228136,230411,237929,239652,243792,245082,245298,247791,249176,249999,275508,
#Partially deleted in new
chr7	114414996	114693768	chr7:114414996-114693768	1	+	114628557	114689926	789624	15	364,178,90,138,201,178,214,105,88,84,102,122,70,164,3987,	0,11505,119620,213543,214808,216531,227413,229688,237206,238929,244575,247068,248453,249276,274785,
#Partially deleted in new
chr7	114414996	114693768	chr7:114414996-114693768	1	+	114426511	114689926	0	18	364,178,90,138,51,201,178,214,105,88,84,202,77,102,122,70,164,3987,	0,11505,119620,213543,214595,214808,216531,227413,229688,237206,238929,243069,244359,244575,247068,248453,249276,274785,
#Partially deleted in new
chr7	114414996	114693772	chr7:114414996-114693772	1	+	114426511	114689926	0	18	364,178,90,75,138,201,178,214,105,88,84,202,77,102,122,70,164,3991,	0,11505,119620,155810,213543,214808,216531,227413,229688,237206,238929,243069,244359,244575,247068,248453,249276,274785,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	114414996	114499728	chr7:114414996-114499728	1	+	114426511	114498918	789624	3	364,178,846,	0,11505,83886,
#Partially deleted in new
chr7	114415054	114690100	chr7:114415054-114690100	1	+	114426511	114689926	0	17	306,178,90,138,201,178,214,105,88,84,202,77,102,122,70,164,319,	0,11447,119562,213485,214750,216473,227355,229630,237148,238871,243011,244301,244517,247010,248395,249218,274727,
#Partially deleted in new
chr7	114415057	114690145	chr7:114415057-114690145	1	+	114426511	114689926	789624	17	303,178,90,138,141,175,214,105,88,84,202,77,102,122,70,164,364,	0,11444,119559,213482,214807,216473,227352,229627,237145,238868,243008,244298,244514,247007,248392,249215,274724,
#Partially deleted in new
chr7	114415111	114642585	chr7:114415111-114642585	0	+	114426511	114642585	789624	4	249,178,169,176,	0,11390,216425,227298,
#Partially deleted in new
chr7	114415219	114628982	chr7:114415219-114628982	0	+	114415219	114415219	8553170	5	141,178,90,75,443,	0,11282,119397,155587,213320,
#Partially deleted in new
chr7	114415318	114645830	chr7:114415318-114645830	1	+	114426511	114644793	0	8	42,178,90,138,201,178,214,1146,	0,11183,119298,213221,214486,216209,227091,229366,
#Partially deleted in new
chr7	114415322	114689957	chr7:114415322-114689957	1	+	114628557	114689926	0	18	38,178,90,58,138,201,178,214,105,88,84,202,77,102,122,70,164,176,	0,11179,119294,123003,213217,214482,216205,227087,229362,236880,238603,242743,244033,244249,246742,248127,248950,274459,
#Partially deleted in new
chr7	114416285	114691925	chr7:114416285-114691925	1	+	114426511	114689926	789624	18	142,178,90,138,51,141,178,214,105,88,84,202,77,102,122,70,164,2144,	0,10216,118331,212254,213306,213579,215242,226124,228399,235917,237640,241780,243070,243286,245779,247164,247987,273496,
#Partially deleted in new
chr7	114426499	114654143	chr7:114426499-114654143	1	+	114426511	114654042	0	9	180,90,138,201,178,214,105,88,218,	0,108117,202040,203305,205028,215910,218185,225703,227426,
#Partially deleted in new
chr7	114426501	114630005	chr7:114426501-114630005	0	+	114426511	114630005	789624	4	178,90,138,219,	0,108115,202038,203285,
#Partially deleted in new
chr7	114426514	114654143	chr7:114426514-114654143	1	+	114426514	114654042	789624	10	165,90,75,138,201,178,214,105,88,218,	0,108102,144292,202025,203290,205013,215895,218170,225688,227411,
#Deleted in new
chr7	114560960	114561517	chr7:114560960-114561517	3	+	114560960	114560960	8553170	1	557,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	114613786	114613906	chr7:114613786-114613906	7	-	114613786	114613786	16724991	1	120,	0,
#Partially deleted in new
chr7	114629853	114652253	chr7:114629853-114652253	0	+	114629853	114652253	789624	5	152,163,214,105,51,	0,1689,12556,14831,22349,
#Deleted in new
chr7	114629858	114631626	chr7:114629858-114631626	1	+	114629858	114631626	789624	3	130,8,102,	0,1177,1666,
#Partially deleted in new
chr7	114629944	114652290	chr7:114629944-114652290	0	+	114629944	114629944	8553170	3	61,160,88,	0,1601,22258,
#Deleted in new
chr7	114653344	114653455	chr7:114653344-114653455	3	+	114653344	114653344	5263520	1	111,	0,
#Partially deleted in new
chr7	114661791	114691914	chr7:114661791-114691914	0	+	114661791	114661791	8553170	5	122,122,70,164,2133,	0,273,1658,2481,27990,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	114922153	115019202	chr7:114922153-115019202	1	+	114922416	115015935	789624	5	483,201,123,276,3515,	0,773,20121,57352,93534,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	114922358	115019202	chr7:114922358-115019202	3	+	114923033	115015935	789624	5	278,201,123,276,3515,	0,568,19916,57147,93329,
#Partially deleted in new
chr7	114922416	115015935	chr7:114922416-115015935	1	+	114922416	115015935	789624	5	220,201,123,276,248,	0,510,19858,57089,93271,
#Deleted in new
chr7	114922560	114923665	chr7:114922560-114923665	1	+	114923033	114923496	789624	3	76,201,207,	0,366,898,
#Deleted in new
chr7	114922853	114923658	chr7:114922853-114923658	1	+	114923033	114923496	789624	2	274,200,	0,605,
#Partially deleted in new
chr7	114923063	115015961	chr7:114923063-115015961	0	+	114923063	115014470	789624	5	64,123,276,71,274,	0,19211,56442,91399,92624,
#Partially deleted in new
chr7	114923075	114980084	chr7:114923075-114980084	0	+	114923075	114979908	789624	4	52,123,276,196,	0,19199,56430,56813,
#Partially deleted in new
chr7	114933868	115015765	chr7:114933868-115015765	0	+	114942345	115015765	789624	4	107,123,276,78,	0,8406,45637,81819,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	115061536	115231355	chr7:115061536-115231355	3	-	115061536	115061536	789624	6	21,78,78,74,141,173,	0,62066,64934,67934,93529,169646,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	115078957	115126314	chr7:115078957-115126314	1	+	115078957	115078957	789624	4	152,93,70,872,	0,39775,43220,46485,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	115078997	115125791	chr7:115078997-115125791	3	+	115078997	115078997	8553170	5	112,93,122,70,349,	0,39735,39937,43180,46445,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	115079018	115125943	chr7:115079018-115125943	0	+	115079018	115079018	8553170	3	91,93,501,	0,39714,46424,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	115118211	115122225	chr7:115118211-115122225	0	+	115118211	115118211	8553170	3	614,122,48,	0,723,3966,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	115136474	115137220	chr7:115136474-115137220	7	-	115136474	115136474	16724991	3	10,179,386,	0,97,360,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	115207893	115207996	chr7:115207893-115207996	3	-	115207893	115207893	8553170	1	103,	0,
#Partially deleted in new
chr7	115503366	115504081	chr7:115503366-115504081	7	+	115503366	115503366	16724991	2	38,370,	0,345,
#Deleted in new
chr7	115581314	115581442	chr7:115581314-115581442	3	-	115581314	115581314	5263520	1	128,	0,
#Partially deleted in new
chr7	115647460	115676329	chr7:115647460-115676329	3	-	115647460	115647460	8553170	2	527,210,	0,28659,
#Deleted in new
chr7	115679344	115682618	chr7:115679344-115682618	3	-	115679344	115679344	8553170	2	1027,230,	0,3044,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	115789728	115791049	chr7:115789728-115791049	3	+	115789728	115789728	8553170	3	538,193,32,	0,700,1289,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	115833272	115833373	chr7:115833272-115833373	3	-	115833272	115833272	8553170	1	101,	0,
#Partially deleted in new
chr7	115935147	116030741	chr7:115935147-116030741	3	-	115940550	115984441	789624	8	5784,148,76,57,115,87,252,109,	0,6745,15726,19438,21531,39022,49114,95485,
#Partially deleted in new
chr7	115935147	115968313	chr7:115935147-115968313	1	-	115940550	115968250	789624	6	5784,148,76,57,115,129,	0,6745,15726,19438,21531,33037,
#Partially deleted in new
chr7	115935155	116030813	chr7:115935155-116030813	1	-	115940550	115984441	789624	7	5776,148,76,57,115,252,181,	0,6737,15718,19430,21523,49106,95477,
#Partially deleted in new
chr7	115939948	116030744	chr7:115939948-116030744	1	-	115941874	115984441	789624	6	2092,76,57,115,252,112,	0,10925,14637,16730,44313,90684,
#Partially deleted in new
chr7	115939948	115950894	chr7:115939948-115950894	0	-	115939948	115939948	8553170	3	496,148,21,	0,1944,10925,
#Partially deleted in new
chr7	115941755	116159896	chr7:115941755-116159896	1	-	115941874	116110905	789624	9	285,76,57,115,87,252,219,47,107,	0,9118,12830,14923,32414,42506,168952,170236,218034,
#Partially deleted in new
chr7	115956748	115968313	chr7:115956748-115968313	0	-	115956748	115956748	8553170	2	45,129,	0,11436,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	116110772	116159895	chr7:116110772-116159895	0	-	116110772	116110772	8553170	5	154,47,68,310,106,	0,1219,6709,9347,49017,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	116120189	116159895	chr7:116120189-116159895	0	-	116120189	116120189	8553170	4	240,44,59,106,	0,1235,37112,39600,
#Deleted in new
chr7	116209233	116211511	chr7:116209233-116211511	3	-	116209233	116209233	8553170	1	2278,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	116210492	116258783	chr7:116210492-116258783	3	+	116210707	116257482	0	7	242,86,253,336,216,159,1490,	0,24041,38527,39668,41267,41825,46801,
#Partially deleted in new
chr7	116210505	116249577	chr7:116210505-116249577	0	+	116210505	116210505	8553170	3	229,86,558,	0,24028,38514,
#Partially deleted in new
chr7	116210538	116250288	chr7:116210538-116250288	0	+	116249161	116250288	789624	3	196,253,128,	0,38481,39622,
#Partially deleted in new
chr7	116210548	116257668	chr7:116210548-116257668	0	+	116210707	116251781	789624	5	186,86,216,159,375,	0,23985,41211,41769,46745,
#Partially deleted in new
chr7	116210560	116249806	chr7:116210560-116249806	0	+	116210560	116210560	8553170	2	174,787,	0,38459,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	116222803	116258783	chr7:116222803-116258783	1	+	116234533	116257482	0	7	223,86,253,336,216,159,1490,	0,11730,26216,27357,28956,29514,34490,
#Partially deleted in new
chr7	116222950	116250032	chr7:116222950-116250032	0	+	116222950	116222950	8553170	3	76,86,1013,	0,11583,26069,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	116237928	116239249	chr7:116237928-116239249	0	-	116237928	116237928	8553170	2	348,235,	0,1086,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	116238003	116327896	chr7:116238003-116327896	3	-	116238003	116238003	8553170	5	329,235,95,118,65,	0,1011,5838,17114,89828,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	116238259	116499465	chr7:116238259-116499465	3	-	116238259	116238259	8553170	5	17,235,59,91,112,	0,755,5618,244553,261094,
#Partially deleted in new
chr7	116250434	116252738	chr7:116250434-116252738	0	+	116250434	116252617	789624	3	62,216,421,	0,1325,1883,
#Partially deleted in new
chr7	116250448	116252600	chr7:116250448-116252600	0	+	116250448	116250448	8553170	2	48,283,	0,1869,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	116251506	116257576	chr7:116251506-116257576	0	+	116251506	116251506	8553170	3	469,159,283,	0,811,5787,
#Deleted in new
chr7	116251750	116252580	chr7:116251750-116252580	0	+	116251750	116251750	8553170	2	225,263,	0,567,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	116275605	116286664	chr7:116275605-116286664	3	-	116275605	116275605	789624	3	1827,84,47,	0,10506,11012,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	116277002	116286651	chr7:116277002-116286651	1	-	116277002	116277002	789624	4	430,39,84,34,	0,7365,9109,9615,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	116277131	116286734	chr7:116277131-116286734	0	-	116277131	116277131	8553170	3	301,84,36,	0,8980,9567,
#Deleted in new
chr7	116283840	116286195	chr7:116283840-116286195	0	-	116283840	116283840	8553170	2	566,84,	0,2271,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	116288072	116506105	chr7:116288072-116506105	0	+	116288072	116288072	8553170	9	42,199,53,132,165,161,215,98,135,	0,1779,10384,51750,139249,144886,209696,211171,217898,
#Partially deleted in new
chr7	116288072	116506108	chr7:116288072-116506108	0	+	116288072	116288072	8553170	6	42,199,165,215,98,138,	0,1779,139249,209696,211171,217898,
#Partially deleted in new
chr7	116288072	116506108	chr7:116288072-116506108	0	+	116288072	116288072	8553170	7	42,199,215,98,91,188,138,	0,1779,209696,211171,211768,212187,217898,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	116289876	116506093	chr7:116289876-116506093	0	+	116289876	116289876	8553170	11	174,100,69,198,140,165,215,98,91,188,123,	0,64041,117535,130286,135887,137445,207892,209367,209964,210383,216094,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	116320750	116321031	chr7:116320750-116321031	3	+	116320750	116320750	8553170	1	281,	0,
#Partially deleted in new
chr7	116416116	116465276	chr7:116416116-116465276	1	-	116416116	116416116	8553170	3	425,186,88,	0,1007,49072,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	116499389	116508541	chr7:116499389-116508541	3	+	116499781	116506121	789624	3	542,188,2571,	0,870,6581,
#Partially deleted in new
chr7	116499739	116506554	chr7:116499739-116506554	1	+	116499781	116506159	789624	2	192,584,	0,6231,
#Deleted in new
chr7	116499779	116501286	chr7:116499779-116501286	1	+	116499781	116500451	789624	2	152,1027,	0,480,
#Partially deleted in new
chr7	116500043	116506353	chr7:116500043-116506353	0	+	116500043	116500043	8553170	2	404,383,	0,5927,
#Partially deleted in new
chr7	116524784	116561176	chr7:116524784-116561176	3	+	116525062	116559287	789624	3	308,165,2231,	0,1740,34161,
#Partially deleted in new
chr7	116525000	116559319	chr7:116525000-116559319	1	+	116525062	116559287	789624	3	92,132,374,	0,1557,33945,
#Partially deleted in new
chr7	116525008	116559636	chr7:116525008-116559636	0	+	116525062	116525323	789624	3	797,165,691,	0,1516,33937,
#Partially deleted in new
chr7	116525008	116561184	chr7:116525008-116561184	1	+	116526587	116559287	789624	3	797,165,2239,	0,1516,33937,
#Deleted in new
chr7	116525011	116527018	chr7:116525011-116527018	0	+	116525011	116525011	8553170	2	81,494,	0,1513,
#Partially deleted in new
chr7	116525739	116561179	chr7:116525739-116561179	1	+	116526587	116559287	789624	3	44,165,2234,	0,785,33206,
#Partially deleted in new
chr7	116525981	116559257	chr7:116525981-116559257	0	+	116526587	116559257	789624	3	80,165,312,	0,543,32964,
#Partially deleted in new
chr7	116526276	116559513	chr7:116526276-116559513	1	+	116526587	116559287	789624	3	112,165,568,	0,248,32669,
#Partially deleted in new
chr7	116526292	116561176	chr7:116526292-116561176	1	+	116526587	116559287	789624	2	397,2231,	0,32653,
#Partially deleted in new
chr7	116563593	116571234	chr7:116563593-116571234	3	-	116563593	116563593	8553170	2	575,117,	0,7524,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	116563593	116663829	chr7:116563593-116663829	3	-	116563593	116563593	8553170	6	575,113,304,144,84,91,	0,7524,9847,37197,91987,100145,
#Deleted in new
chr7	116570959	116573744	chr7:116570959-116573744	0	-	116570959	116570959	8553170	2	271,198,	0,2587,
#Partially deleted in new
chr7	116571151	116614683	chr7:116571151-116614683	0	-	116571151	116571151	8553170	3	79,304,85,	0,2289,43447,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	116573484	116614820	chr7:116573484-116614820	0	-	116573484	116573484	8553170	3	260,144,222,	0,27306,41114,
#Partially deleted in new
chr7	116672389	116699599	chr7:116672389-116699599	0	+	116695756	116699599	789624	3	188,50,529,	0,23360,26681,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr7	116672391	116798386	chr7:116672391-116798386	3	+	116699084	116796124	0	21	186,1214,192,135,174,161,103,137,162,100,219,147,157,141,231,81,182,110,166,137,2500,	0,26679,59276,67558,68460,82963,85045,85246,86067,86999,90658,97253,99106,99457,102489,104997,106384,109596,110912,123263,123495,
#Partially deleted in new
chr7	116672404	116796342	chr7:116672404-116796342	1	+	116699084	116796124	0	21	173,1214,192,135,174,161,103,137,162,154,219,147,157,141,231,81,182,110,166,137,456,	0,26666,59263,67545,68447,82950,85032,85233,86054,86932,90645,97240,99093,99444,102476,104984,106371,109583,110899,123250,123482,
#Partially deleted in new
chr7	116699084	116763080	chr7:116699084-116763080	1	+	116699084	116763080	0	9	1200,192,135,174,161,103,137,162,31,	0,32583,40865,41767,56270,58352,58553,59374,63965,
#Partially deleted in new
chr7	116758516	116769909	chr7:116758516-116769909	0	+	116758516	116769866	789624	4	104,100,219,265,	0,874,4533,11128,
#Partially deleted in new
chr7	116769665	116775072	chr7:116769665-116775072	0	+	116769665	116775072	789624	3	126,157,192,	0,1832,5215,
#Partially deleted in new
chr7	116811069	116898786	chr7:116811069-116898786	0	+	116888154	116898786	789624	4	33,64,52,15,	0,77057,81924,87702,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	116862472	116922049	chr7:116862472-116922049	3	+	116862611	116917867	789624	10	178,64,52,64,207,80,79,72,63,4323,	0,25654,30521,36299,41704,43790,47760,49596,53587,55254,
#Partially deleted in new
chr7	116862529	116904336	chr7:116862529-116904336	0	+	116862529	116862529	8553170	4	121,15,64,160,	0,30501,36242,41647,
#Partially deleted in new
chr7	116862586	116916110	chr7:116862586-116916110	0	+	116862611	116880141	789624	10	64,81,64,52,64,207,80,79,72,51,	0,17480,25540,30407,36185,41590,43676,47646,49482,53473,
#Partially deleted in new
chr7	116862593	116880138	chr7:116862593-116880138	1	+	116862611	116880138	789624	2	57,72,	0,17473,
#Partially deleted in new
chr7	116862599	116918188	chr7:116862599-116918188	0	+	116862611	116910231	789624	10	51,64,52,64,207,80,99,72,63,462,	0,25527,30394,36172,41577,43663,47613,49469,53460,55127,
#Partially deleted in new
chr7	116862599	116904754	chr7:116862599-116904754	1	+	116862611	116904398	789624	5	51,64,52,64,578,	0,25527,30394,36172,41577,
#Partially deleted in new
chr7	116862602	116910294	chr7:116862602-116910294	0	+	116862602	116862602	8553170	6	48,64,52,64,207,82,	0,25524,30391,36169,41574,47610,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	116862602	116888699	chr7:116862602-116888699	0	+	116862602	116862602	8553170	2	48,573,	0,25524,
#Partially deleted in new
chr7	116862603	116874290	chr7:116862603-116874290	0	+	116862603	116862603	8553170	2	47,579,	0,11108,
#Partially deleted in new
chr7	116862613	116906736	chr7:116862613-116906736	0	+	116862613	116862613	8553170	6	37,64,52,64,207,474,	0,25513,30380,36158,41563,43649,
#Partially deleted in new
chr7	116873453	116876376	chr7:116873453-116876376	7	-	116873453	116873453	16724991	4	1334,432,89,99,	0,1654,2405,2824,
#Partially deleted in new
chr7	116886063	116910231	chr7:116886063-116910231	1	+	116886063	116910231	789624	7	39,64,52,64,207,80,19,	0,2063,6930,12708,18113,20199,24149,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	116909759	116916122	chr7:116909759-116916122	0	+	116909759	116909759	8553170	3	552,72,63,	0,2309,6300,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	116909876	116909964	chr7:116909876-116909964	3	-	116909876	116909876	8553170	1	88,	0,
#Partially deleted in new
chr7	116915455	116917760	chr7:116915455-116917760	0	+	116915455	116915455	8553170	2	667,34,	0,2271,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	116944285	116944414	chr7:116944285-116944414	7	-	116944285	116944285	16724991	1	129,	0,
#Deleted in new
chr7	116952445	116954334	chr7:116952445-116954334	3	-	116952445	116952445	789624	1	1889,	0,
#Deleted in new
chr7	116952697	116952813	chr7:116952697-116952813	3	+	116952697	116952697	8553170	1	116,	0,
#Deleted in new
chr7	116953213	116953324	chr7:116953213-116953324	3	+	116953213	116953213	8553170	1	111,	0,
#Partially deleted in new
chr7	116953237	117230096	chr7:116953237-117230096	1	+	116953540	117229857	789624	14	454,83,160,55,116,76,155,98,115,73,103,151,140,335,	0,146524,166323,176555,177253,178647,182843,185197,217624,236083,237596,256549,268685,276524,
#Partially deleted in new
chr7	116953341	117230103	chr7:116953341-117230103	3	+	116953540	117229857	789624	15	350,83,160,55,116,76,155,98,115,73,103,151,93,140,342,	0,146420,166219,176451,177149,178543,182739,185093,217520,235979,237492,256445,265742,268581,276420,
#Partially deleted in new
chr7	116953346	117138532	chr7:116953346-117138532	0	+	116953540	117119568	789624	7	345,160,55,116,76,155,98,	0,166214,176446,177144,178538,182734,185088,
#Partially deleted in new
chr7	116953466	117221967	chr7:116953466-117221967	0	+	116953540	117170905	789624	7	225,115,73,103,151,93,45,	0,217395,235854,237367,256320,265617,268456,
#Partially deleted in new
chr7	116953502	117119662	chr7:116953502-117119662	0	+	117098814	117119662	789624	4	189,203,83,102,	0,145110,146259,166058,
#Partially deleted in new
chr7	116953520	117230099	chr7:116953520-117230099	0	+	116953540	117230099	789624	13	171,83,160,55,116,76,155,98,115,73,103,151,338,	0,146241,166040,176272,176970,178364,182560,184914,217341,235800,237313,256266,276241,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	116953898	116959817	chr7:116953898-116959817	1	+	116953898	116953898	789624	5	211,219,180,301,665,	0,562,1075,2524,5254,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	116954238	116968574	chr7:116954238-116968574	1	+	116954238	116954238	8553170	4	441,180,97,176,	0,735,4350,14160,
#Partially deleted in new
chr7	116954390	117119719	chr7:116954390-117119719	0	+	117099766	117119719	789624	3	289,83,159,	0,145371,165170,
#Partially deleted in new
chr7	116954462	117098806	chr7:116954462-117098806	0	+	116954462	116954462	8553170	3	217,180,194,	0,511,144150,
#Deleted in new
chr7	116954479	116954679	chr7:116954479-116954679	3	+	116954479	116954479	8553170	1	200,	0,
#Partially deleted in new
chr7	116954619	116968574	chr7:116954619-116968574	2	+	116954619	116954619	8553170	3	60,180,176,	0,354,13779,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	116954973	116968574	chr7:116954973-116968574	0	+	116954973	116954973	8553170	4	180,301,97,176,	0,1449,3615,13425,
#Deleted in new
chr7	116954982	116955154	chr7:116954982-116955154	3	+	116954982	116954982	8553170	1	172,	0,
#Deleted in new
chr7	116956430	116956723	chr7:116956430-116956723	3	+	116956430	116956430	8553170	1	293,	0,
#Deleted in new
chr7	116956649	116957122	chr7:116956649-116957122	0	+	116956649	116956649	8553170	1	473,	0,
#Deleted in new
chr7	116959592	116959805	chr7:116959592-116959805	3	+	116959592	116959592	8553170	1	213,	0,
#Partially deleted in new
chr7	116965845	116967472	chr7:116965845-116967472	3	-	116965845	116965845	8553170	2	277,182,	0,1445,
#Deleted in new
chr7	116972164	116972911	chr7:116972164-116972911	7	-	116972164	116972164	16724991	1	747,	0,
#Partially deleted in new
chr7	117014887	117230103	chr7:117014887-117230103	1	+	117015001	117229857	789624	15	127,83,160,55,116,76,155,98,115,73,103,151,93,140,342,	0,84874,104673,114905,115603,116997,121193,123547,155974,174433,175946,194899,204196,207035,214874,
#Partially deleted in new
chr7	117014935	117129809	chr7:117014935-117129809	0	+	117098814	117129809	789624	5	79,203,83,160,17,	0,83677,84826,104625,114857,
#Deleted in new
chr7	117020210	117020319	chr7:117020210-117020319	3	+	117020210	117020210	5263520	1	109,	0,
#Partially deleted in new
chr7	117020217	117230103	chr7:117020217-117230103	1	+	117098814	117229857	789624	16	412,203,83,160,55,116,76,155,98,115,73,103,136,93,140,342,	0,78395,79544,99343,109575,110273,111667,115863,118217,150644,169103,170616,189569,198866,201705,209544,
#Partially deleted in new
chr7	117020217	117099839	chr7:117020217-117099839	0	+	117099766	117099839	789624	3	412,89,78,	0,70531,79544,
#Partially deleted in new
chr7	117020217	117130505	chr7:117020217-117130505	0	+	117020217	117020217	8553170	4	412,83,55,15,	0,79544,109575,110273,
#Partially deleted in new
chr7	117020226	117137342	chr7:117020226-117137342	1	+	117020607	117136324	789624	7	403,83,160,55,116,76,1262,	0,79535,99334,109566,110264,111658,115854,
#Partially deleted in new
chr7	117020244	117129847	chr7:117020244-117129847	0	+	117099766	117129847	789624	5	385,97,83,160,55,	0,2658,79517,99316,109548,
#Partially deleted in new
chr7	117020258	117098702	chr7:117020258-117098702	0	+	117020258	117020258	8553170	3	371,89,90,	0,70490,78354,
#Partially deleted in new
chr7	117020276	117230103	chr7:117020276-117230103	1	+	117020607	117229857	789624	15	353,83,160,55,116,76,155,98,115,73,103,151,93,140,342,	0,79485,99284,109516,110214,111608,115804,118158,150585,169044,170557,189510,198807,201646,209485,
#Partially deleted in new
chr7	117072071	117074724	chr7:117072071-117074724	0	-	117072071	117072071	8553170	4	290,687,107,40,	0,382,1748,2613,
#Partially deleted in new
chr7	117072071	117090780	chr7:117072071-117090780	1	-	117072071	117072071	789624	5	290,687,107,208,59,	0,382,1748,8793,18650,
#Deleted in new
chr7	117117911	117117983	chr7:117117911-117117983	3	+	117117911	117117911	8553170	1	72,	0,
#Partially deleted in new
chr7	117119685	117198397	chr7:117119685-117198397	0	+	117119685	117119685	8553170	10	35,55,116,76,155,98,115,73,103,78,	0,10107,10805,12199,16395,18749,51176,69635,71148,78634,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	117145364	117146480	chr7:117145364-117146480	0	-	117145364	117145364	8553170	2	243,349,	0,767,
#Partially deleted in new
chr7	117173408	117209937	chr7:117173408-117209937	0	+	117173408	117173408	8553170	4	158,73,103,151,	0,15912,17425,36378,
#Partially deleted in new
chr7	117182668	117222062	chr7:117182668-117222062	0	+	117182668	117182668	8553170	7	77,73,103,127,151,93,140,	0,6652,8165,8966,27118,36415,39254,
#Partially deleted in new
chr7	117182680	117219090	chr7:117182680-117219090	0	+	117182680	117182680	789624	10	65,75,73,136,103,127,221,73,151,7,	0,1444,6640,7452,8153,8954,15639,16391,27106,36403,
#Deleted in new
chr7	117184125	117184199	chr7:117184125-117184199	3	+	117184125	117184125	8553170	1	74,	0,
#Deleted in new
chr7	117187547	117187740	chr7:117187547-117187740	7	-	117187547	117187547	16724991	1	193,	0,
#Deleted in new
chr7	117190132	117190269	chr7:117190132-117190269	3	+	117190132	117190132	8553170	1	137,	0,
#Deleted in new
chr7	117191646	117191761	chr7:117191646-117191761	3	+	117191646	117191646	8553170	1	115,	0,
#Deleted in new
chr7	117199071	117199144	chr7:117199071-117199144	0	+	117199071	117199071	8553170	1	73,	0,
#Deleted in new
chr7	117219024	117223133	chr7:117219024-117223133	0	+	117219024	117219024	8553170	3	152,140,273,	0,2898,3836,
#Deleted in new
chr7	117262917	117264888	chr7:117262917-117264888	7	-	117262917	117262917	16724991	2	432,355,	0,1616,
#Deleted in new
chr7	117263916	117264388	chr7:117263916-117264388	7	+	117263916	117263916	16724991	1	472,	0,
#Deleted in new
chr7	117264392	117264530	chr7:117264392-117264530	7	-	117264392	117264392	16724991	1	138,	0,
#Partially deleted in new
chr7	117275450	117323099	chr7:117275450-117323099	0	-	117315261	117322989	8553170	6	2934,265,312,274,227,193,	0,22161,25394,39620,45116,47456,
#Partially deleted in new
chr7	117276630	117323289	chr7:117276630-117323289	3	-	117278154	117322989	789624	5	1754,265,278,227,383,	0,20981,38440,43936,46276,
#Partially deleted in new
chr7	117277530	117323114	chr7:117277530-117323114	0	-	117315261	117322989	789624	5	854,265,214,227,208,	0,20081,37540,43036,45376,
#Partially deleted in new
chr7	117297725	117323041	chr7:117297725-117323041	0	-	117297725	117322989	789624	3	151,227,135,	0,22841,25181,
#Partially deleted in new
chr7	117300860	117322236	chr7:117300860-117322236	3	+	117300860	117300860	8553170	2	170,179,	0,21197,
#Deleted in new
chr7	117320468	117323152	chr7:117320468-117323152	0	-	117320468	117320468	8553170	2	325,246,	0,2438,
#Partially deleted in new
chr7	117363221	117427523	chr7:117363221-117427523	3	-	117363595	117427460	789624	13	527,114,106,110,57,76,125,135,112,112,123,100,168,	0,4130,5390,16716,17789,18847,19764,21504,22476,56941,59015,63614,64134,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	117363307	117427498	chr7:117363307-117427498	0	-	117363307	117363307	8553170	12	441,1366,110,57,76,125,135,112,112,123,100,143,	0,4044,16630,17703,18761,19678,21418,22390,56855,58929,63528,64048,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	117363307	117427503	chr7:117363307-117427503	0	-	117363307	117363307	8553170	11	441,1366,110,57,76,85,135,112,123,100,148,	0,4044,16630,17703,18761,19678,21418,56855,58929,63528,64048,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	117363314	117427505	chr7:117363314-117427505	0	-	117363314	117363314	8553170	11	434,1366,110,57,76,125,135,112,112,100,150,	0,4037,16623,17696,18754,19671,21411,22383,56848,63521,64041,
#Partially deleted in new
chr7	117363535	117427507	chr7:117363535-117427507	0	-	117384853	117427460	789624	12	213,114,106,110,57,76,125,135,112,123,100,152,	0,3816,5076,16402,17475,18533,19450,21190,56627,58701,63300,63820,
#Partially deleted in new
chr7	117422271	117428123	chr7:117422271-117428123	0	-	117422271	117426881	789624	3	88,100,54,	0,4564,5798,
#Deleted in new
chr7	117439981	117440780	chr7:117439981-117440780	7	-	117439981	117439981	16724991	2	457,256,	0,543,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	117465783	117504308	chr7:117465783-117504308	0	+	117465783	117465783	8553170	3	48,118,56,	0,9907,38469,
#Partially deleted in new
chr7	117479303	117530978	chr7:117479303-117530978	0	+	117509112	117530978	789624	5	42,233,111,109,80,	0,158,24949,29730,51595,
#Partially deleted in new
chr7	117479962	117668665	chr7:117479962-117668665	3	+	117480094	117667108	0	27	185,111,109,216,90,164,126,247,93,183,192,95,87,724,129,38,251,80,151,228,101,249,156,90,173,106,1758,	0,24290,29071,50936,54313,55285,56585,60137,62053,68678,79501,107776,110390,111971,114967,122863,123569,126711,130556,131618,134650,147559,162475,172879,184725,185496,186945,
#Partially deleted in new
chr7	117480010	117511329	chr7:117480010-117511329	0	+	117480010	117480010	8553170	4	137,111,109,251,	0,24242,29023,31068,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	117480010	117594988	chr7:117480010-117594988	0	+	117480094	117505167	8553170	15	137,111,74,109,216,90,164,126,247,93,192,95,87,724,59,	0,24242,25144,29023,50888,54265,55237,56537,60089,62005,79453,107728,110342,111923,114919,
#Partially deleted in new
chr7	117480010	117627910	chr7:117480010-117627910	1	+	117480094	117627800	8553170	17	137,111,109,216,90,164,126,247,93,192,38,251,80,151,228,101,389,	0,24242,29023,50888,54265,55237,56537,60089,62005,79453,122815,123521,126663,130508,131570,134602,147511,
#Partially deleted in new
chr7	117480010	117627910	chr7:117480010-117627910	1	+	117480094	117627800	8553170	21	137,111,109,216,90,164,126,247,93,192,95,87,724,129,38,251,80,151,228,101,389,	0,24242,29023,50888,54265,55237,56537,60089,62005,79453,107728,110342,111923,114919,122815,123521,126663,130508,131570,134602,147511,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	117480011	117509643	chr7:117480011-117509643	0	+	117480011	117480011	8553170	4	136,111,74,610,	0,24241,25143,29022,
#Partially deleted in new
chr7	117480094	117667071	chr7:117480094-117667071	0	+	117480094	117667071	789624	26	53,111,109,216,164,126,247,93,183,192,95,87,724,129,38,251,80,151,228,101,249,156,90,173,106,164,	0,24158,28939,50804,55153,56453,60005,61921,68546,79369,107644,110258,111839,114835,122731,123437,126579,130424,131486,134518,147427,162343,172747,184593,185364,186813,
#Partially deleted in new
chr7	117480094	117667108	chr7:117480094-117667108	1	+	117480094	117667108	8553170	26	53,111,109,216,90,164,126,247,93,192,95,87,724,129,38,251,80,151,228,101,249,156,90,173,106,201,	0,24158,28939,50804,54181,55153,56453,60005,61921,79369,107644,110258,111839,114835,122731,123437,126579,130424,131486,134518,147427,162343,172747,184593,185364,186813,
#Deleted in new
chr7	117487736	117487929	chr7:117487736-117487929	7	+	117487736	117487736	16724991	1	193,	0,
#Partially deleted in new
chr7	117559637	117587749	chr7:117559637-117587749	0	+	117559637	117559637	8553170	3	18,119,11,	0,5031,28101,
#Partially deleted in new
chr7	117560732	117564676	chr7:117560732-117564676	3	-	117560732	117560732	789624	2	60,161,	0,3783,
#Deleted in new
chr7	117586206	117586416	chr7:117586206-117586416	7	-	117586206	117586206	16724991	1	210,	0,
#Partially deleted in new
chr7	117592517	117668562	chr7:117592517-117668562	0	+	117592517	117642511	8553170	14	140,129,38,251,80,151,228,101,49,156,90,173,106,1655,	0,2412,10308,11014,14156,18001,19063,22095,35004,49920,60324,72170,72941,74390,
#Partially deleted in new
chr7	117611616	117627910	chr7:117611616-117627910	0	+	117611616	117627800	789624	3	192,101,389,	0,2996,15905,
#Partially deleted in new
chr7	117652842	117715948	chr7:117652842-117715948	0	+	117652842	117715859	789624	4	89,173,106,191,	0,11845,12616,62915,
#Partially deleted in new
chr7	117689712	117715971	chr7:117689712-117715971	0	+	117689712	117689712	8553170	2	209,214,	0,26045,
#Partially deleted in new
chr7	117710016	117715873	chr7:117710016-117715873	0	+	117710016	117710016	8553170	3	685,95,116,	0,4154,5741,
#Partially deleted in new
chr7	117710131	117715827	chr7:117710131-117715827	0	+	117710131	117710131	8553170	5	199,91,64,95,70,	0,479,2209,4039,5626,
#Partially deleted in new
chr7	117710650	117873507	chr7:117710650-117873507	3	-	117711536	117873415	789624	23	1132,102,133,64,186,206,179,188,153,100,87,80,96,276,118,255,151,100,204,1654,225,108,173,	0,7367,8853,10416,13896,14401,17438,24262,24618,35180,35362,45904,47224,49784,56408,66860,69790,72211,73600,80477,100114,150558,162684,
#Partially deleted in new
chr7	117710740	117791780	chr7:117710740-117791780	0	-	117711536	117791780	789624	21	1042,102,133,64,186,206,179,188,153,100,87,80,96,276,118,255,151,100,204,40,490,	0,7277,8763,10326,13806,14311,17348,24172,24528,35090,35272,45814,47134,49694,56318,66770,69700,72121,73510,75645,80550,
#Partially deleted in new
chr7	117710862	117873429	chr7:117710862-117873429	0	-	117784436	117873415	789624	23	920,102,133,64,186,206,179,188,153,100,87,80,96,276,118,255,151,100,204,1491,225,108,95,	0,7155,8641,10204,13684,14189,17226,24050,24406,34968,35150,45692,47012,49572,56196,66648,69578,71999,73388,80428,99902,150346,162472,
#Partially deleted in new
chr7	117711627	117728208	chr7:117711627-117728208	0	-	117724710	117728208	789624	6	155,102,133,64,186,120,	0,6390,7876,9439,12919,16461,
#Deleted in new
chr7	117713752	117715901	chr7:117713752-117715901	0	+	117713752	117713752	8553170	2	513,144,	0,2005,
#Partially deleted in new
chr7	117735330	117760647	chr7:117735330-117760647	0	-	117735330	117760647	789624	5	91,100,80,96,213,	0,10500,21224,22544,25104,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	117755371	117758112	chr7:117755371-117758112	0	-	117755371	117755371	8553170	3	203,80,238,	0,1183,2503,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	117755379	117760593	chr7:117755379-117760593	0	-	117755547	117760593	789624	4	195,80,96,159,	0,1175,2495,5055,
#Partially deleted in new
chr7	117760267	117767191	chr7:117760267-117767191	0	-	117760267	117760267	8553170	2	443,133,	0,6791,
#Partially deleted in new
chr7	117792585	117871638	chr7:117792585-117871638	0	-	117792585	117861271	789624	4	196,225,108,49,	0,18179,68623,79004,
#Deleted in new
chr7	117792595	117793605	chr7:117792595-117793605	0	-	117792595	117792595	8553170	2	186,193,	0,817,
#Partially deleted in new
chr7	117792661	117872220	chr7:117792661-117872220	0	-	117792661	117861271	789624	4	120,225,108,117,	0,18103,68547,79442,
#Partially deleted in new
chr7	117810766	117874139	chr7:117810766-117874139	0	-	117810766	117861271	789624	3	223,108,139,	0,50442,63234,
#Partially deleted in new
chr7	117882858	117883675	chr7:117882858-117883675	7	+	117882858	117882858	16724991	2	229,242,	0,575,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	117998857	118004045	chr7:117998857-118004045	3	-	117998857	117998857	8553170	3	281,125,29,	0,4308,5159,
#Partially deleted in new
chr7	118184031	118192824	chr7:118184031-118192824	3	+	118184223	118192002	0	4	223,41,128,913,	0,1622,4246,7880,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	118184143	118192155	chr7:118184143-118192155	1	+	118184223	118188409	789624	3	111,41,3878,	0,1510,4134,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	118184155	118192164	chr7:118184155-118192164	1	+	118185685	118192002	789624	3	1539,128,253,	0,4122,7756,
#Partially deleted in new
chr7	118184166	118188405	chr7:118184166-118188405	0	+	118184223	118188405	789624	3	114,48,128,	0,1480,4111,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	118214668	118496075	chr7:118214668-118496075	0	+	118214668	118214668	8553170	16	136,115,174,107,137,86,53,97,41,142,90,91,108,70,116,36,	0,19762,20032,21372,22121,25244,45168,65524,108002,108186,109817,260270,261248,262401,279004,281371,
#Partially deleted in new
chr7	118214672	118239987	chr7:118214672-118239987	3	+	118236088	118239961	789624	6	132,115,174,107,137,79,	0,19758,20028,21368,22117,25236,
#Partially deleted in new
chr7	118224675	118242689	chr7:118224675-118242689	1	+	118224830	118239961	789624	7	334,115,174,107,137,90,341,	0,9755,10025,11365,12114,15233,17673,
#Partially deleted in new
chr7	118224706	118234503	chr7:118224706-118234503	0	+	118224830	118234503	789624	3	303,60,73,	0,3225,9724,
#Partially deleted in new
chr7	118224730	118242692	chr7:118224730-118242692	1	+	118224830	118239992	789624	7	279,115,174,107,137,86,344,	0,9700,9970,11310,12059,15182,17618,
#Partially deleted in new
chr7	118239827	118242715	chr7:118239827-118242715	0	+	118239827	118239827	8553170	2	171,367,	0,2521,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	118239974	118496171	chr7:118239974-118496171	0	+	118239974	118239974	8553170	14	24,53,41,138,98,96,76,96,136,91,108,70,116,132,	0,19862,82696,82884,187002,191949,193543,193909,203425,234964,235942,237095,253698,256065,
#Partially deleted in new
chr7	118880102	118881288	chr7:118880102-118881288	7	-	118880102	118880102	16724991	2	142,844,	0,342,
#Deleted in new
chr7	118950385	118951259	chr7:118950385-118951259	7	-	118950385	118950385	16724991	1	874,	0,
#Deleted in new
chr7	119178176	119179149	chr7:119178176-119179149	7	-	119178176	119178176	16724991	1	973,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	119704555	119907375	chr7:119704555-119907375	3	-	119704555	119704555	789624	3	417,59,83,	0,96260,202737,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	119750814	119907375	chr7:119750814-119907375	1	-	119750814	119750814	789624	4	1361,74,59,83,	0,31469,50001,156478,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	120005975	120006101	chr7:120005975-120006101	3	-	120005975	120005975	8553170	1	126,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	120141015	120142996	chr7:120141015-120142996	3	-	120141015	120141015	8553170	2	188,281,	0,1700,
#Partially deleted in new
chr7	120168344	120186064	chr7:120168344-120186064	3	+	120168344	120168344	8553170	3	50,131,570,	0,16627,17150,
#Partially deleted in new
chr7	120273667	120750331	chr7:120273667-120750331	3	+	120274632	120747858	789624	6	2080,163,96,93,248,2651,	0,459235,467866,468842,472112,474013,
#Partially deleted in new
chr7	120672870	120672975	chr7:120672870-120672975	3	+	120672870	120672870	8553170	1	105,	0,
#Partially deleted in new
chr7	120740843	120747738	chr7:120740843-120747738	0	+	120740843	120747738	789624	5	35,96,93,248,58,	0,690,1666,4936,6837,
#Partially deleted in new
chr7	120742320	120747722	chr7:120742320-120747722	0	+	120742320	120742320	8553170	3	282,248,42,	0,3459,5360,
#Deleted in new
chr7	120746737	120752514	chr7:120746737-120752514	3	-	120746737	120746737	8553170	3	169,187,191,	0,5094,5586,
#Partially deleted in new
chr7	120787319	120858357	chr7:120787319-120858357	3	-	120788591	120856763	789624	8	1578,144,108,75,136,83,136,538,	0,19229,23143,28409,51457,52707,69378,70500,
#Partially deleted in new
chr7	120788321	120838797	chr7:120788321-120838797	0	-	120814214	120838797	789624	6	576,144,108,243,75,21,	0,18227,22141,25683,27407,50455,
#Partially deleted in new
chr7	120788373	120858323	chr7:120788373-120858323	1	-	120788591	120856763	789624	9	524,144,108,75,136,83,136,169,120,	0,18175,22089,27355,50403,51653,68324,69446,69830,
#Partially deleted in new
chr7	120810488	120857124	chr7:120810488-120857124	0	-	120810488	120856763	789624	6	82,75,136,83,136,39,	0,5240,28288,29538,46209,46597,
#Partially deleted in new
chr7	120815728	120857353	chr7:120815728-120857353	0	-	120815728	120856763	789624	5	75,136,83,136,121,	0,23048,24298,40969,41504,
#Partially deleted in new
chr7	120815750	120857199	chr7:120815750-120857199	0	-	120815750	120856763	789624	5	53,136,83,136,161,	0,23026,24276,40947,41288,
#Partially deleted in new
chr7	120838776	120858402	chr7:120838776-120858402	0	-	120838776	120856763	789624	5	136,83,136,169,169,	0,1250,17921,19043,19457,
#Partially deleted in new
chr7	120950748	120977216	chr7:120950748-120977216	3	+	120950896	120974844	0	12	176,72,101,66,97,72,120,158,194,193,39,2489,	0,415,2555,4810,13993,15877,16780,17185,18262,19939,22456,23979,
#Partially deleted in new
chr7	120950762	120956980	chr7:120950762-120956980	1	+	120950896	120956171	0	5	162,72,101,66,821,	0,401,2541,4796,5397,
#Partially deleted in new
chr7	120950784	120975290	chr7:120950784-120975290	0	+	120950896	120966640	0	11	140,72,101,66,72,120,158,194,193,39,563,	0,379,2519,4774,15841,16744,17149,18226,19903,22420,23943,
#Partially deleted in new
chr7	120950794	120956978	chr7:120950794-120956978	1	+	120950896	120955657	789624	4	130,72,101,1420,	0,369,2509,4764,
#Partially deleted in new
chr7	120951115	120975014	chr7:120951115-120975014	1	+	120951180	120974844	789624	11	120,101,66,97,72,120,158,194,193,39,287,	0,2188,4443,13626,15510,16413,16818,17895,19572,22089,23612,
#Partially deleted in new
chr7	120967495	120970880	chr7:120967495-120970880	0	+	120967495	120967495	8553170	4	153,158,194,193,	0,438,1515,3192,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	120981425	120981553	chr7:120981425-120981553	7	-	120981425	120981425	16724991	1	128,	0,
#Partially deleted in new
chr7	120988676	121297444	chr7:120988676-121297444	3	+	120989621	121295652	789624	23	236,480,184,107,76,133,169,143,73,168,105,170,71,51,187,169,118,137,221,102,88,147,2005,	0,714,26988,58210,75561,109022,111249,135654,137143,138413,139705,141448,145146,147363,152150,153296,248037,255525,277550,278030,278538,282607,306763,
#Partially deleted in new
chr7	120988696	121050868	chr7:120988696-121050868	1	+	120989621	121050868	789624	5	216,480,184,107,69,	0,694,26968,58190,62103,
#Partially deleted in new
chr7	120989050	121133893	chr7:120989050-121133893	0	+	120989621	121133893	789624	12	820,184,107,76,133,169,143,73,168,105,170,71,	0,26614,57836,75187,108648,110875,135280,136769,138039,139331,141074,144772,
#Partially deleted in new
chr7	120989174	121052013	chr7:120989174-121052013	0	+	120989174	120989174	8553170	4	696,184,107,1211,	0,26490,57712,61628,
#Partially deleted in new
chr7	120989598	121261799	chr7:120989598-121261799	1	+	120989621	121261673	789624	18	272,184,107,76,133,169,143,73,168,105,170,71,51,187,169,118,137,168,	0,26066,57288,74639,108100,110327,134732,136221,137491,138783,140526,144224,146441,151228,152374,247115,254603,272033,
#Partially deleted in new
chr7	120989798	121097815	chr7:120989798-121097815	0	+	120989798	120994011	789624	5	72,181,107,76,117,	0,4102,57088,74439,107900,
#Partially deleted in new
chr7	121015743	121050442	chr7:121015743-121050442	0	+	121015743	121015743	8553170	3	105,107,52,	0,31143,34647,
#Deleted in new
chr7	121050926	121051203	chr7:121050926-121051203	7	+	121050926	121050926	16724991	1	277,	0,
#Partially deleted in new
chr7	121076577	121136054	chr7:121076577-121136054	0	+	121097742	121136054	789624	10	71,133,169,143,73,168,105,170,71,15,	0,21121,23348,47753,49242,50512,51804,53547,57245,59462,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	121083699	121083813	chr7:121083699-121083813	7	-	121083699	121083699	16724991	1	114,	0,
#Partially deleted in new
chr7	121149555	121261831	chr7:121149555-121261831	0	+	121149555	121149555	8553170	4	88,118,137,200,	0,87158,94646,112076,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	121194947	121195057	chr7:121194947-121195057	3	-	121194947	121194947	8553170	1	110,	0,
#Partially deleted in new
chr7	121325366	121339458	chr7:121325366-121339458	1	+	121325415	121339345	789624	4	114,251,287,578,	0,4200,6311,13514,
#Partially deleted in new
chr7	121329002	121341104	chr7:121329002-121341104	3	+	121329292	121339345	789624	4	385,251,287,2224,	0,564,2675,9878,
#Partially deleted in new
chr7	121348850	121396334	chr7:121348850-121396334	3	-	121350460	121382969	0	10	1700,127,85,51,59,124,30,105,54,173,	0,2292,11192,14046,15279,22449,23259,30059,34106,47311,
#Deleted in new
chr7	121350382	121351541	chr7:121350382-121351541	0	-	121350382	121350382	8553170	2	168,399,	0,760,
#Partially deleted in new
chr7	121360055	121396364	chr7:121360055-121396364	0	-	121360055	121382969	789624	8	72,51,59,124,30,105,54,66,	0,2841,4074,11244,12054,18854,22901,36243,
#Partially deleted in new
chr7	121360091	121396308	chr7:121360091-121396308	0	-	121360091	121378937	789624	9	36,51,59,124,30,105,56,54,147,	0,2805,4038,11208,12018,18818,20117,22865,36070,
#Deleted in new
chr7	121362704	121364552	chr7:121362704-121364552	0	-	121362704	121362704	8553170	2	243,423,	0,1425,
#Deleted in new
chr7	121398451	121398767	chr7:121398451-121398767	7	+	121398451	121398451	16724991	1	316,	0,
#Deleted in new
chr7	121419071	121419845	chr7:121419071-121419845	7	+	121419071	121419071	16724991	2	324,94,	0,680,
#Deleted in new
chr7	121440833	121441261	chr7:121440833-121441261	7	-	121440833	121440833	16724991	1	428,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	121643333	121686363	chr7:121643333-121686363	3	-	121643333	121643333	8553170	4	142,128,153,232,	0,297,6919,42798,
#Deleted in new
chr7	121736442	121736725	chr7:121736442-121736725	3	+	121736442	121736442	8553170	1	283,	0,
#Partially deleted in new
chr7	121842367	121845131	chr7:121842367-121845131	7	-	121842367	121842367	16724991	4	853,721,220,256,	0,1083,1899,2508,
#Partially deleted in new
chr7	121873088	122062036	chr7:121873088-122062036	3	+	121873499	122061220	0	30	469,66,180,152,96,67,158,151,185,127,47,3556,145,92,86,21,97,83,135,135,164,136,147,94,74,129,147,143,136,957,	0,55067,94862,99452,103084,103696,110576,110878,123293,124791,131525,137245,146035,155463,158385,161006,161193,163511,165666,166365,167727,169519,171333,178339,178777,180821,181852,185711,186664,187991,
#Partially deleted in new
chr7	121873160	121967023	chr7:121873160-121967023	0	+	121873160	121873160	8553170	3	397,66,105,	0,54995,93758,
#Partially deleted in new
chr7	121873360	122061361	chr7:121873360-122061361	1	+	121873499	122061220	0	29	197,66,180,152,96,67,158,151,185,127,47,976,145,92,86,97,83,135,135,164,136,147,94,74,129,147,143,136,282,	0,54795,94590,99180,102812,103424,110304,110606,123021,124519,131253,136973,145763,155191,158113,160921,163239,165394,166093,167455,169247,171061,178067,178505,180549,181580,185439,186392,187719,
#Deleted in new
chr7	122011207	122013312	chr7:122011207-122013312	0	+	122011207	122011207	8553170	2	102,491,	0,1614,
#Deleted in new
chr7	122028217	122034340	chr7:122028217-122034340	0	+	122028217	122028217	8553170	3	426,86,59,	0,3256,6064,
#Deleted in new
chr7	122028433	122032080	chr7:122028433-122032080	0	+	122028433	122028433	8553170	2	210,607,	0,3040,
#Deleted in new
chr7	122033857	122036632	chr7:122033857-122036632	0	+	122033857	122033857	8553170	2	521,33,	0,2742,
#Partially deleted in new
chr7	122034012	122039584	chr7:122034012-122039584	0	+	122034012	122034012	8553170	5	103,97,83,135,131,	0,269,2587,4742,5441,
#Deleted in new
chr7	122059373	122061692	chr7:122059373-122061692	0	+	122059373	122059373	8553170	2	515,613,	0,1706,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	122075646	122086153	chr7:122075646-122086153	0	-	122075646	122075646	8553170	6	961,177,851,96,104,142,	0,2191,3215,5853,7141,10365,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr7	122076132	122133822	chr7:122076132-122133822	1	-	122076488	122133726	0	23	475,177,89,116,96,168,141,109,111,127,122,68,60,112,123,149,128,79,147,68,85,177,306,	0,1705,2729,3464,5367,9879,15570,16710,16915,22317,22612,25238,25488,36985,37465,38941,40500,40746,42174,42430,50242,53228,57384,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	122076148	122144255	chr7:122076148-122144255	0	-	122076148	122076148	8553170	13	459,177,89,116,96,168,141,109,111,127,68,60,95,	0,1689,2713,3448,5351,9863,15554,16694,16899,22301,25222,25472,68012,
#Partially deleted in new
chr7	122076241	122144280	chr7:122076241-122144280	3	-	122076488	122133726	0	24	366,177,89,116,96,168,141,109,111,127,122,68,60,112,123,149,128,79,147,68,85,177,225,120,	0,1596,2620,3355,5258,9770,15461,16601,16806,22208,22503,25129,25379,36876,37356,38832,40391,40637,42065,42321,50133,53119,57275,67919,
#Partially deleted in new
chr7	122076302	122133781	chr7:122076302-122133781	0	-	122082876	122133726	789624	24	305,177,89,116,96,104,168,141,109,111,127,122,68,60,112,123,149,128,79,147,68,85,177,265,	0,1535,2559,3294,5197,6485,9709,15400,16540,16745,22147,22442,25068,25318,36815,37295,38771,40330,40576,42004,42260,50072,53058,57214,
#Partially deleted in new
chr7	122076302	122133781	chr7:122076302-122133781	0	-	122098564	122133726	789624	22	305,177,89,116,168,141,109,111,127,118,68,60,112,123,149,128,79,147,68,85,177,265,	0,1535,2559,3294,9709,15400,16540,16745,22147,22446,25068,25318,36815,37295,38771,40330,40576,42004,42260,50072,53058,57214,
#Partially deleted in new
chr7	122077835	122082872	chr7:122077835-122082872	0	-	122082806	122082872	789624	6	179,89,179,94,96,85,	0,1026,1313,1761,3664,4952,
#Deleted in new
chr7	122081719	122081781	chr7:122081719-122081781	3	+	122081719	122081719	8553170	1	62,	0,
#Partially deleted in new
chr7	122159299	122162243	chr7:122159299-122162243	7	+	122159299	122159299	16724991	3	478,466,910,	0,1188,2034,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	122216346	122218437	chr7:122216346-122218437	3	+	122216346	122216346	8553170	3	116,60,296,	0,622,1795,
#Deleted in new
chr7	122234530	122234903	chr7:122234530-122234903	7	+	122234530	122234530	16724991	1	373,	0,
#Deleted in new
chr7	122301393	122304505	chr7:122301393-122304505	3	-	122301996	122304437	789624	4	962,133,135,869,	0,1405,1783,2243,
#Deleted in new
chr7	122301968	122304499	chr7:122301968-122304499	1	-	122301996	122304437	789624	5	387,133,135,222,491,	0,830,1208,1668,2040,
#Deleted in new
chr7	122303657	122310077	chr7:122303657-122310077	3	+	122303657	122303657	789624	7	611,171,975,145,186,71,494,	0,915,1630,2858,3645,4829,5926,
#Deleted in new
chr7	122304330	122310691	chr7:122304330-122310691	0	-	122304330	122304437	789624	2	181,507,	0,5854,
#Deleted in new
chr7	122304949	122305817	chr7:122304949-122305817	0	+	122304949	122304949	8553170	2	238,530,	0,338,
#Deleted in new
chr7	122306880	122308557	chr7:122306880-122308557	0	+	122306880	122306880	8553170	2	608,71,	0,1606,
#Partially deleted in new
chr7	122318424	122886759	chr7:122318424-122886759	1	-	122320164	122886019	789624	30	1914,105,108,33,84,75,148,156,120,142,157,104,21,124,64,102,188,137,9,201,109,67,140,112,119,237,81,333,114,761,	0,7052,27149,42363,42505,60943,68601,70158,74771,75016,89115,97636,117935,119916,123087,132949,152950,155956,162427,171656,172887,194824,236125,262754,296756,303056,310823,344812,418530,567574,
#Partially deleted in new
chr7	122318426	122886759	chr7:122318426-122886759	1	-	122320164	122886337	789624	28	1912,105,108,33,84,75,148,156,120,142,157,104,124,64,102,188,149,201,109,67,140,112,119,237,81,333,114,761,	0,7050,27147,42361,42503,60941,68599,70156,74769,75014,89113,97634,119914,123085,132947,152948,155954,171654,172885,194822,236123,262752,296754,303054,310821,344810,418528,567572,
#Partially deleted in new
chr7	122318426	122886759	chr7:122318426-122886759	1	-	122320164	122886337	789624	29	1912,105,108,33,84,75,148,156,120,142,157,104,21,124,64,102,188,149,201,109,67,140,112,119,237,81,333,114,761,	0,7050,27147,42361,42503,60941,68599,70156,74769,75014,89113,97634,117933,119914,123085,132947,152948,155954,171654,172885,194822,236123,262752,296754,303054,310821,344810,418528,567572,
#Partially deleted in new
chr7	122319398	122438376	chr7:122319398-122438376	0	-	122320164	122438376	789624	15	940,105,108,33,84,75,148,156,120,142,157,9,104,21,36,	0,6078,26175,41389,41531,59969,67627,69184,73797,74042,88141,94669,96662,116961,118942,
#Partially deleted in new
chr7	122319745	122886458	chr7:122319745-122886458	3	-	122320164	122886337	789624	28	593,105,108,33,84,75,15,148,156,142,157,104,124,64,102,188,137,201,109,67,140,112,119,237,81,333,114,460,	0,5731,25828,41042,41184,59622,66549,67280,68837,73695,87794,96315,118595,121766,131628,151629,154635,170335,171566,193503,234804,261433,295435,301735,309502,343491,417209,566253,
#Partially deleted in new
chr7	122320002	122886357	chr7:122320002-122886357	1	-	122320164	122886337	789624	30	336,105,108,33,84,75,148,156,120,142,157,9,104,124,64,102,188,137,9,201,109,67,140,112,119,237,81,333,114,359,	0,5474,25571,40785,40927,59365,67023,68580,73193,73438,87537,94065,96058,118338,121509,131371,151372,154378,160849,170078,171309,193246,234547,261176,295178,301478,309245,343234,416952,565996,
#Partially deleted in new
chr7	122320036	122621529	chr7:122320036-122621529	0	-	122320164	122621529	789624	23	302,105,108,33,84,75,148,156,142,157,104,124,64,102,188,137,201,109,67,140,112,119,49,	0,5440,25537,40751,40893,59331,66989,68546,73404,87503,96024,118304,121475,131337,151338,154344,170044,171275,193212,234513,261142,295144,301444,
#Partially deleted in new
chr7	122328468	122378946	chr7:122328468-122378946	1	+	122328468	122328468	8553170	4	97,88,97,181,	0,25860,38313,50297,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	122328468	122379188	chr7:122328468-122379188	0	+	122328468	122328468	8553170	4	97,88,135,423,	0,25860,39601,50297,
#Partially deleted in new
chr7	122328472	122426158	chr7:122328472-122426158	0	+	122328472	122328472	8553170	5	93,88,273,59,198,	0,25856,84337,93529,97488,
#Partially deleted in new
chr7	122328478	122422061	chr7:122328478-122422061	0	+	122328478	122328478	8553170	5	30,88,273,154,60,	0,25850,84331,92488,93523,
#Partially deleted in new
chr7	122328491	122426010	chr7:122328491-122426010	0	+	122328491	122328491	8553170	6	74,88,273,154,59,50,	0,25837,84318,92475,93510,97469,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	122328491	122382296	chr7:122328491-122382296	0	+	122328491	122328491	8553170	6	74,88,97,135,131,80,	0,25837,38290,39578,50274,53725,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	122328491	122379041	chr7:122328491-122379041	0	+	122328491	122328491	8553170	4	74,47,88,276,	0,10458,25837,50274,
#Deleted in new
chr7	122328491	122331138	chr7:122328491-122331138	0	+	122328491	122328491	8553170	2	74,424,	0,2223,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	122328491	122440377	chr7:122328491-122440377	0	+	122328491	122328491	8553170	5	74,88,135,48,219,	0,25837,39578,110875,111667,
#Partially deleted in new
chr7	122328491	122379087	chr7:122328491-122379087	0	+	122328491	122328491	8553170	4	74,153,88,322,	0,3409,25837,50274,
#Partially deleted in new
chr7	122328491	122422060	chr7:122328491-122422060	0	+	122328491	122328491	8553170	5	74,158,53,273,59,	0,25767,66978,84318,93510,
#Partially deleted in new
chr7	122328491	122440388	chr7:122328491-122440388	0	+	122328491	122328491	8553170	4	74,88,48,230,	0,25837,110875,111667,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	122328491	122369839	chr7:122328491-122369839	0	+	122328491	122328491	8553170	4	74,88,135,207,	0,25837,39578,41141,
#Partially deleted in new
chr7	122328491	122426075	chr7:122328491-122426075	0	+	122328491	122328491	8553170	4	74,158,59,115,	0,25767,93510,97469,
#Partially deleted in new
chr7	122422001	122427441	chr7:122422001-122427441	1	+	122422001	122422001	8553170	2	59,266,	0,5174,
#Partially deleted in new
chr7	122422030	122440362	chr7:122422030-122440362	0	+	122422030	122422030	8553170	5	30,66,152,251,204,	0,2131,2278,3930,18128,
#Partially deleted in new
chr7	122422031	122440341	chr7:122422031-122440341	0	+	122422031	122422031	8553170	3	29,48,183,	0,17335,18127,
#Partially deleted in new
chr7	122491417	122585761	chr7:122491417-122585761	0	-	122491417	122491417	8553170	5	3,67,140,112,250,	0,21831,63132,89761,94094,
#Deleted in new
chr7	122676579	122676811	chr7:122676579-122676811	7	+	122676579	122676579	16724991	1	232,	0,
#Deleted in new
chr7	122681314	122681662	chr7:122681314-122681662	7	+	122681314	122681314	16724991	1	348,	0,
#Deleted in new
chr7	122697711	122699156	chr7:122697711-122699156	3	-	122697787	122698918	789624	1	1445,	0,
#Deleted in new
chr7	122701663	122702967	chr7:122701663-122702967	3	-	122701832	122702750	789624	1	1304,	0,
#Deleted in new
chr7	122701669	122702912	chr7:122701669-122702912	1	-	122702040	122702750	789624	3	413,123,303,	0,523,940,
#Deleted in new
chr7	122849745	122850352	chr7:122849745-122850352	7	+	122849745	122849745	16724991	1	607,	0,
#Partially deleted in new
chr7	122994703	122995700	chr7:122994703-122995700	3	-	122994758	122995634	789624	1	997,	0,
#Partially deleted in new
chr7	123069248	123103589	chr7:123069248-123103589	3	-	123069248	123069248	8553170	4	265,105,71,64,	0,762,33212,34277,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	123113530	123199986	chr7:123113530-123199986	3	-	123115517	123199946	789624	15	2125,138,162,110,107,102,99,120,152,49,58,188,137,129,139,	0,3940,5550,9595,12038,15314,15852,20879,33628,54843,54973,55617,58237,67442,86317,
#Partially deleted in new
chr7	123114524	123199972	chr7:123114524-123199972	0	-	123186737	123199946	789624	16	1131,138,162,110,107,102,99,120,152,49,58,188,137,129,54,125,	0,2946,4556,8601,11044,14320,14858,19885,32634,53849,53979,54623,57243,66448,72171,85323,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr7	123115374	123199971	chr7:123115374-123199971	0	-	123190589	123199946	789624	18	281,138,162,110,107,102,99,120,152,168,177,49,58,188,137,129,156,124,	0,2096,3706,7751,10194,13470,14008,19035,31784,33031,34069,52999,53129,53773,56393,65598,75083,84473,
#Partially deleted in new
chr7	123115374	123181146	chr7:123115374-123181146	1	-	123149602	123181008	789624	16	281,138,162,110,107,102,99,120,152,168,177,49,58,188,137,174,	0,2096,3706,7751,10194,13470,14008,19035,31784,33031,34069,52999,53129,53773,56393,65598,
#Deleted in new
chr7	123230119	123230741	chr7:123230119-123230741	7	-	123230119	123230119	16724991	1	622,	0,
#Partially deleted in new
chr7	123452399	123532948	chr7:123452399-123532948	1	-	123452742	123512340	0	13	526,186,249,177,171,176,211,156,173,162,135,401,573,	0,4981,8957,12433,16814,27395,44296,50197,50544,50802,57501,59544,79976,
#Partially deleted in new
chr7	123452404	123534664	chr7:123452404-123534664	3	-	123452742	123512340	0	13	521,186,249,177,171,176,211,156,173,162,135,401,173,	0,4976,8952,12428,16809,27390,44291,50192,50539,50797,57496,59539,82087,
#Partially deleted in new
chr7	123452454	123532948	chr7:123452454-123532948	0	-	123462799	123512340	0	14	471,186,260,185,177,171,176,211,156,173,162,135,401,160,	0,4926,8902,10193,12378,16759,27340,44241,50142,50489,50747,57446,59489,80334,
#Partially deleted in new
chr7	123452697	123534563	chr7:123452697-123534563	0	-	123469352	123512340	789624	12	228,186,249,177,171,211,156,173,162,135,401,72,	0,4683,8659,12135,16516,43998,49899,50246,50504,57203,59246,81794,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	123456628	123459856	chr7:123456628-123459856	3	+	123456628	123456628	8553170	3	137,150,164,	0,770,3064,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	123457987	123458094	chr7:123457987-123458094	3	-	123457987	123457987	8553170	1	107,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	123501057	123535077	chr7:123501057-123535077	0	-	123501057	123501057	8553170	4	2306,135,401,586,	0,8843,10886,33434,
#Partially deleted in new
chr7	123502596	123534578	chr7:123502596-123534578	0	-	123502596	123502596	8553170	4	156,173,109,87,	0,347,605,31895,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	123536996	123557780	chr7:123536996-123557780	3	-	123542118	123557645	0	5	5224,66,117,45,156,	0,8614,13473,20407,20628,
#Partially deleted in new
chr7	123541028	123558255	chr7:123541028-123558255	1	-	123542118	123557795	0	5	1192,66,117,45,481,	0,4582,9441,16375,16746,
#Partially deleted in new
chr7	123541029	123557904	chr7:123541029-123557904	1	-	123542118	123557795	789624	4	1191,66,117,130,	0,4581,9440,16745,
#Partially deleted in new
chr7	123541029	123557904	chr7:123541029-123557904	1	-	123542118	123557795	789624	4	1191,66,45,130,	0,4581,16374,16745,
#Partially deleted in new
chr7	123541095	123557455	chr7:123541095-123557455	0	-	123542118	123557455	789624	4	1125,66,117,52,	0,4515,9374,16308,
#Partially deleted in new
chr7	123541836	123545825	chr7:123541836-123545825	0	-	123541836	123541836	8553170	2	384,215,	0,3774,
#Partially deleted in new
chr7	123541857	123557801	chr7:123541857-123557801	0	-	123546787	123557795	789624	6	363,66,160,117,45,27,	0,3753,4800,8612,15546,15917,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	123542000	123557804	chr7:123542000-123557804	0	-	123542000	123542000	789624	6	220,66,117,209,45,30,	0,3610,8469,9367,15403,15774,
#Partially deleted in new
chr7	123545610	123557679	chr7:123545610-123557679	0	-	123545610	123557499	789624	3	66,117,276,	0,4859,11793,
#Partially deleted in new
chr7	123550104	123557818	chr7:123550104-123557818	0	-	123550104	123550104	8553170	3	482,45,44,	0,7299,7670,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	123550208	123557804	chr7:123550208-123557804	0	-	123550208	123550208	8553170	4	378,209,45,30,	0,1159,7195,7566,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	123554694	123557822	chr7:123554694-123557822	0	-	123554694	123554694	8553170	2	2754,48,	0,3080,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	123567009	123639481	chr7:123567009-123639481	3	+	123614502	123636981	789624	14	79,181,61,73,125,109,53,132,159,246,172,571,154,2673,	0,37022,41584,42015,45266,47491,49211,49354,50569,57559,60100,61854,62956,69799,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	123584858	123624582	chr7:123584858-123624582	3	-	123584858	123584858	8553170	4	142,87,141,40,	0,11493,13942,39684,
#Partially deleted in new
chr7	123601853	123637867	chr7:123601853-123637867	1	+	123614502	123636981	789624	11	61,73,137,53,132,159,246,172,571,154,1059,	0,7171,12619,14367,14510,15725,22715,25256,27010,28112,34955,
#Partially deleted in new
chr7	123601858	123616495	chr7:123601858-123616495	0	+	123614502	123616495	789624	5	56,181,109,53,132,	0,2173,12642,14362,14505,
#Partially deleted in new
chr7	123601866	123637878	chr7:123601866-123637878	1	+	123614502	123636981	789624	12	48,181,61,109,53,132,159,246,172,571,154,1070,	0,2165,6727,12634,14354,14497,15712,22702,25243,26997,28099,34942,
#Partially deleted in new
chr7	123609022	123637032	chr7:123609022-123637032	1	+	123624661	123630063	789624	11	75,109,53,132,159,117,40,172,510,60,224,	0,5478,7198,7341,8556,15546,15752,18087,19841,21037,27786,
#Partially deleted in new
chr7	123609057	123637878	chr7:123609057-123637878	1	+	123614502	123636981	789624	10	40,109,53,132,159,246,172,571,154,1070,	0,5443,7163,7306,8521,15511,18052,19806,20908,27751,
#Partially deleted in new
chr7	123609057	123627135	chr7:123609057-123627135	0	+	123614502	123627135	789624	7	40,109,53,132,159,246,26,	0,5443,7163,7306,8521,15511,18052,
#Partially deleted in new
chr7	123614160	123624957	chr7:123614160-123624957	1	-	123614160	123614160	789624	5	76,93,137,187,62,	0,1147,7233,8813,10735,
#Partially deleted in new
chr7	123615456	123624723	chr7:123615456-123624723	0	-	123615456	123615456	8553170	4	73,137,187,181,	0,5937,7517,9086,
#Partially deleted in new
chr7	123619981	123624729	chr7:123619981-123624729	1	-	123619981	123619981	8553170	3	324,137,187,	0,1412,4561,
#Partially deleted in new
chr7	123622755	123624685	chr7:123622755-123624685	0	-	123622755	123622755	8553170	2	405,143,	0,1787,
#Partially deleted in new
chr7	123655806	123664290	chr7:123655806-123664290	3	+	123655963	123663745	0	3	430,1344,572,	0,6053,7912,
#Partially deleted in new
chr7	123655868	123663588	chr7:123655868-123663588	1	+	123655963	123663245	789624	2	368,550,	0,7170,
#Partially deleted in new
chr7	123681934	123749067	chr7:123681934-123749067	3	-	123684518	123748734	0	11	2646,109,521,154,43,169,24,97,87,135,450,	0,7107,10412,12780,13888,14644,22699,24342,24805,27154,66683,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	123749067	123751166	chr7:123749067-123751166	3	+	123749067	123749067	8553170	1	2099,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	123790604	123790711	chr7:123790604-123790711	3	-	123790604	123790604	8553170	1	107,	0,
#Partially deleted in new
chr7	123814138	123829252	chr7:123814138-123829252	7	+	123814138	123814138	16724991	3	893,90,296,	0,5202,14818,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	123845168	123877478	chr7:123845168-123877478	3	+	123868273	123877155	789624	5	517,70,1005,90,725,	0,2920,23054,29592,31585,
#Partially deleted in new
chr7	123848069	123877185	chr7:123848069-123877185	1	+	123868273	123877155	789624	4	89,1005,90,432,	0,20153,26691,28684,
#Partially deleted in new
chr7	123848133	123877185	chr7:123848133-123877185	0	+	123868273	123876031	789624	5	25,1005,90,57,432,	0,20089,26627,27892,28620,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	123925313	123971414	chr7:123925313-123971414	3	+	123953570	123970248	789624	7	39,112,1160,90,441,99,408,	0,24558,28051,29683,34170,44884,45693,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	123925854	123960046	chr7:123925854-123960046	1	+	123953570	123959969	789624	6	210,85,112,1160,90,563,	0,21849,24017,27510,29142,33629,
#Partially deleted in new
chr7	123932131	123932459	chr7:123932131-123932459	7	+	123932131	123932131	16724991	1	328,	0,
#Partially deleted in new
chr7	123947699	123960039	chr7:123947699-123960039	1	+	123953570	123959969	789624	5	89,112,1160,90,556,	0,2172,5665,7297,11784,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	123994621	124027659	chr7:123994621-124027659	3	+	123994621	123994621	789624	5	96,175,127,97,1259,	0,306,4401,18489,31779,
#Deleted in new
chr7	123994630	123995412	chr7:123994630-123995412	0	+	123994630	123994630	8553170	2	87,485,	0,297,
#Deleted in new
chr7	124030915	124033023	chr7:124030915-124033023	3	-	124031860	124033003	789624	1	2108,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	124032204	124395118	chr7:124032204-124395118	3	+	124032204	124032204	8553170	9	75,93,36,90,75,52,114,85,3690,	0,16927,320611,327904,344117,353393,356209,357267,359224,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	124274678	124287544	chr7:124274678-124287544	3	-	124274678	124274678	8553170	2	320,330,	0,12536,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	124334293	124353415	chr7:124334293-124353415	0	+	124334293	124334293	8553170	3	138,36,265,	0,18522,18857,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	124337379	124349860	chr7:124337379-124349860	3	-	124337379	124337379	8553170	3	121,101,32,	0,5081,12449,
#Deleted in new
chr7	124476370	124476955	chr7:124476370-124476955	3	+	124476370	124476955	789624	1	585,	0,
#Deleted in new
chr7	124480523	124481395	chr7:124480523-124481395	7	+	124480523	124480523	16724991	1	872,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	124647718	124647822	chr7:124647718-124647822	3	+	124647718	124647718	8553170	1	104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	124742311	124745017	chr7:124742311-124745017	3	-	124742311	124742311	8553170	1	2706,	0,
#Partially deleted in new
chr7	124745996	124765627	chr7:124745996-124765627	3	-	124746524	124764976	789624	2	1347,1674,	0,17957,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	124777291	124790810	chr7:124777291-124790810	3	-	124777501	124790624	789624	4	271,74,57,267,	0,4711,10524,13252,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	124777291	124790689	chr7:124777291-124790689	0	-	124777291	124777291	8553170	4	271,74,57,146,	0,4711,10524,13252,
#Partially deleted in new
chr7	124822385	124929981	chr7:124822385-124929981	3	-	124823961	124897173	0	19	1689,106,92,89,136,206,157,57,80,167,156,291,131,115,48,114,73,185,188,	0,2866,4828,6868,12893,18587,20421,24556,29486,30586,36571,40964,48525,69880,74779,75875,93188,106429,107408,
#Partially deleted in new
chr7	124822385	124827250	chr7:124822385-124827250	0	-	124823961	124827250	789624	4	166,278,106,37,	0,1411,2866,4828,
#Partially deleted in new
chr7	124822386	124929983	chr7:124822386-124929983	1	-	124823961	124863502	789624	18	1688,106,92,89,136,206,157,57,80,167,156,291,115,48,114,73,185,190,	0,2865,4827,6867,12892,18586,20420,24555,29485,30585,36570,40963,69879,74778,75874,93187,106428,107407,
#Partially deleted in new
chr7	124822400	124829342	chr7:124822400-124829342	0	-	124822527	124829342	789624	5	151,104,106,92,89,	0,1570,2851,4813,6853,
#Partially deleted in new
chr7	124823855	124929802	chr7:124823855-124929802	0	-	124825313	124897173	789624	19	219,106,105,89,136,206,157,57,80,167,156,291,131,115,48,114,73,185,345,	0,1396,3345,5398,11423,17117,18951,23086,28016,29116,35101,39494,47055,68410,73309,74405,91718,104959,105602,
#Partially deleted in new
chr7	124823961	124897184	chr7:124823961-124897184	0	-	124827253	124897173	789624	14	113,106,92,136,206,157,57,80,167,156,291,131,115,20,	0,1290,3252,11317,17011,18845,22980,27910,29010,34995,39388,46949,68304,73203,
#Deleted in new
chr7	124840655	124842832	chr7:124840655-124842832	0	-	124840943	124842832	789624	2	523,26,	0,2151,
#Deleted in new
chr7	124840980	124843249	chr7:124840980-124843249	0	-	124840980	124840980	8553170	2	198,443,	0,1826,
#Partially deleted in new
chr7	124851807	124859050	chr7:124851807-124859050	0	-	124851854	124859050	789624	3	144,167,94,	0,1164,7149,
#Partially deleted in new
chr7	124851925	124853527	chr7:124851925-124853527	0	-	124851925	124851925	8553170	2	26,556,	0,1046,
#Partially deleted in new
chr7	124858780	124863385	chr7:124858780-124863385	0	-	124858914	124863385	789624	2	332,36,	0,4569,
#Partially deleted in new
chr7	124858977	124897202	chr7:124858977-124897202	0	-	124863626	124897173	789624	4	135,291,115,38,	0,4372,33288,38187,
#Partially deleted in new
chr7	124870918	124929944	chr7:124870918-124929944	0	-	124870918	124897173	789624	7	123,115,48,114,73,182,151,	0,21347,26246,27342,44655,57896,58875,
#Partially deleted in new
chr7	124870944	124929827	chr7:124870944-124929827	0	-	124870944	124897173	789624	6	97,115,48,114,185,34,	0,21321,26220,27316,57870,58849,
#Partially deleted in new
chr7	124892373	124929825	chr7:124892373-124929825	0	-	124892373	124892373	8553170	7	7,114,48,114,73,182,32,	0,328,4791,5887,23200,36441,37420,
#Partially deleted in new
chr7	124892725	124929825	chr7:124892725-124929825	0	-	124892725	124892725	8553170	6	90,48,114,73,185,32,	0,4439,5535,22848,36089,37068,
#Partially deleted in new
chr7	124898260	124929802	chr7:124898260-124929802	0	-	124898260	124898260	8553170	4	114,73,185,345,	0,17313,30554,31197,
#Partially deleted in new
chr7	124928920	124929786	chr7:124928920-124929786	0	-	124928920	124928920	8553170	2	79,228,	0,638,
#Partially deleted in new
chr7	124929872	125125907	chr7:124929872-125125907	0	+	124929872	124929872	8553170	5	144,106,81,155,83,	0,10407,90460,187001,195952,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	124929897	125179315	chr7:124929897-125179315	3	+	124929897	124929897	8553170	6	119,106,81,87,82,1672,	0,10382,90435,208675,223588,247746,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	124929914	125145234	chr7:124929914-125145234	1	+	124929914	124929914	789624	8	102,106,81,102,87,153,87,2520,	0,10365,90418,150797,159775,195910,208658,212800,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	124929920	125144566	chr7:124929920-125144566	1	+	124929920	124929920	789624	11	96,106,331,81,155,94,202,95,153,87,1852,	0,10359,70761,90412,186953,188708,191721,193060,195904,208652,212794,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	124993007	125102050	chr7:124993007-125102050	0	+	124993007	124993007	8553170	6	192,81,102,87,110,91,	0,27325,87704,96682,106396,108952,
#Partially deleted in new
chr7	125033452	125035301	chr7:125033452-125035301	7	+	125033452	125033452	16724991	3	547,304,448,	0,771,1401,
#Partially deleted in new
chr7	125151325	125153611	chr7:125151325-125153611	3	-	125151325	125151325	8553170	2	451,149,	0,2137,
#Deleted in new
chr7	125159973	125160547	chr7:125159973-125160547	7	-	125159973	125159973	16724991	1	574,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	125172217	125379321	chr7:125172217-125379321	3	+	125172217	125172217	789624	10	17,45,449,137,66,147,163,83,82,264,	0,12351,13826,22730,157464,158039,163035,174907,191217,206840,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	125229578	125264291	chr7:125229578-125264291	3	-	125229578	125229578	789624	5	1263,187,141,78,249,	0,16765,18722,20401,34464,
#Deleted in new
chr7	125300503	125300878	chr7:125300503-125300878	7	-	125300503	125300503	16724991	1	375,	0,
#Deleted in new
chr7	125344968	125345377	chr7:125344968-125345377	7	+	125344968	125344968	16724991	1	409,	0,
#Deleted in new
chr7	125345824	125346197	chr7:125345824-125346197	7	+	125345824	125345824	16724991	1	373,	0,
#Partially deleted in new
chr7	125431346	125461611	chr7:125431346-125461611	3	+	125431346	125431346	8553170	3	247,153,131,	0,6798,30134,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	125438110	125466401	chr7:125438110-125466401	1	+	125438110	125438110	8553170	3	187,170,132,	0,23370,28159,
#Partially deleted in new
chr7	125438221	125461869	chr7:125438221-125461869	0	+	125438221	125438221	8553170	2	76,389,	0,23259,
#Duplicated in new
chr7	125917870	125933832	chr7:125917870-125933832	3	+	125917870	125917870	8553170	5	248,97,257,176,59,	0,2186,5823,6341,15903,
#Partially deleted in new
chr7	126378969	126424185	chr7:126378969-126424185	3	+	126378969	126378969	8553170	7	32,110,60,113,113,153,65,	0,36259,39266,40863,42094,42458,45151,
#Partially deleted in new
chr7	126438597	127253294	chr7:126438597-127253294	3	-	126439118	127243204	0	11	571,247,936,137,201,138,155,136,217,821,498,	0,7528,94354,170764,331267,463944,465374,465950,667898,804097,814199,
#Partially deleted in new
chr7	126438614	127252381	chr7:126438614-127252381	1	-	126446075	127243204	0	11	554,302,936,137,201,138,155,136,217,821,253,	0,7456,94337,170747,331250,463927,465357,465933,667881,804080,813514,
#Partially deleted in new
chr7	126438627	126465299	chr7:126438627-126465299	0	-	126438627	126438627	8553170	4	541,247,53,69,	0,7498,8508,26603,
#Partially deleted in new
chr7	126438691	127243219	chr7:126438691-127243219	0	-	126609420	127243204	0	11	477,247,936,137,71,201,138,155,136,217,525,	0,7434,94260,170670,263065,331173,463850,465280,465856,667804,804003,
#Partially deleted in new
chr7	126438692	126447188	chr7:126438692-126447188	0	-	126438692	126438692	8553170	3	476,302,53,	0,7378,8443,
#Partially deleted in new
chr7	126439076	127253093	chr7:126439076-127253093	0	-	126446075	127243204	0	12	92,218,302,936,137,201,138,155,136,217,821,297,	0,6159,6994,93875,170285,330788,463465,464895,465471,667419,803618,813720,
#Partially deleted in new
chr7	126439118	126533905	chr7:126439118-126533905	1	-	126439118	126533905	789624	3	50,247,954,	0,7007,93833,
#Deleted in new
chr7	126511134	126512879	chr7:126511134-126512879	7	+	126511134	126511134	16724991	1	1745,	0,
#Partially deleted in new
chr7	126533050	127112320	chr7:126533050-127112320	0	-	126533050	126533050	8553170	10	728,5,71,201,138,155,136,75,217,152,	0,76443,168706,236814,369491,370921,371497,572245,573445,579118,
#Partially deleted in new
chr7	126769920	127118272	chr7:126769920-127118272	0	-	126769920	126769920	8553170	6	145,138,155,136,217,52,	0,132621,134051,134627,336575,348300,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	126868766	126870532	chr7:126868766-126870532	7	-	126868766	126868766	16724991	1	1766,	0,
#Partially deleted in new
chr7	126904108	127251219	chr7:126904108-127251219	0	-	126904108	127243204	789624	5	18,136,217,821,55,	0,439,202387,338586,347056,
#Partially deleted in new
chr7	126980966	126981778	chr7:126980966-126981778	7	+	126980966	126980966	16724991	2	362,63,	0,749,
#Deleted in new
chr7	127058087	127058184	chr7:127058087-127058184	3	-	127058087	127058087	5263520	1	97,	0,
#Partially deleted in new
chr7	127075964	127106652	chr7:127075964-127106652	0	-	127076117	127106652	789624	2	272,157,	0,30531,
#Partially deleted in new
chr7	127080692	127090918	chr7:127080692-127090918	0	-	127080692	127080692	8553170	4	185,71,99,10,	0,1411,3998,10216,
#Partially deleted in new
chr7	127084288	127095810	chr7:127084288-127095810	0	-	127084288	127084288	8553170	4	127,99,105,146,	0,402,6620,11376,
#Partially deleted in new
chr7	127090922	127112286	chr7:127090922-127112286	0	-	127090922	127090922	8553170	5	91,75,217,146,118,	0,14373,15573,20118,21246,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	127215126	127229921	chr7:127215126-127229921	3	+	127215126	127215126	789624	3	127,236,1549,	0,4340,13246,
#Partially deleted in new
chr7	127215126	127229033	chr7:127215126-127229033	0	+	127215126	127215126	789624	2	127,661,	0,13246,
#Partially deleted in new
chr7	127243142	127251026	chr7:127243142-127251026	0	-	127243142	127243204	789624	2	373,178,	0,7706,
#Deleted in new
chr7	127295619	127296203	chr7:127295619-127296203	7	+	127295619	127295619	16724991	1	584,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	127346789	127373565	chr7:127346789-127373565	0	-	127346789	127346789	8553170	2	1254,224,	0,26552,
#Deleted in new
chr7	127349832	127350293	chr7:127349832-127350293	3	-	127349832	127349832	8553170	1	461,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	127350127	127351523	chr7:127350127-127351523	3	+	127350127	127350127	8553170	2	390,126,	0,1270,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	127359784	127364759	chr7:127359784-127364759	3	-	127359784	127359784	8553170	1	4975,	0,
#Partially deleted in new
chr7	127370042	127392691	chr7:127370042-127392691	3	-	127371813	127391557	789624	6	1772,1693,144,96,119,534,	0,3299,7143,16017,21454,22115,
#Partially deleted in new
chr7	127370298	127392694	chr7:127370298-127392694	1	-	127371813	127391557	789624	6	1516,1693,144,96,119,635,	0,3043,6887,15761,21198,21761,
#Partially deleted in new
chr7	127371599	127392366	chr7:127371599-127392366	1	-	127371813	127391557	789624	6	215,1693,144,96,119,108,	0,1742,5586,14460,19897,20659,
#Partially deleted in new
chr7	127373927	127392694	chr7:127373927-127392694	1	-	127374322	127391557	789624	6	398,707,144,96,119,635,	0,400,3258,12132,17569,18132,
#Partially deleted in new
chr7	127374609	127392718	chr7:127374609-127392718	0	-	127374609	127391557	789624	5	425,144,96,119,171,	0,2576,11450,16887,17938,
#Partially deleted in new
chr7	127374945	127392118	chr7:127374945-127392118	0	-	127374945	127391557	789624	5	89,144,96,119,54,	0,2240,11114,16551,17119,
#Partially deleted in new
chr7	127377190	127431924	chr7:127377190-127431924	0	-	127377190	127391557	789624	4	139,96,119,56,	0,8869,14306,54678,
#Partially deleted in new
chr7	127476882	127485804	chr7:127476882-127485804	3	+	127476882	127476882	789624	4	87,72,105,693,	0,714,2250,8229,
#Deleted in new
chr7	127580617	127585607	chr7:127580617-127585607	3	-	127582013	127585182	789624	2	2692,1457,	0,3533,
#Partially deleted in new
chr7	127582819	127593606	chr7:127582819-127593606	0	-	127582819	127582819	8553170	3	490,196,109,	0,6936,10678,
#Partially deleted in new
chr7	127588344	127591705	chr7:127588344-127591705	3	+	127588498	127591299	0	6	221,81,110,72,126,493,	0,738,1140,1721,2618,2868,
#Partially deleted in new
chr7	127588385	127591681	chr7:127588385-127591681	0	+	127588385	127588385	8553170	5	180,81,653,126,469,	0,697,1099,2577,2827,
#Partially deleted in new
chr7	127588402	127591088	chr7:127588402-127591088	0	+	127588498	127591088	789624	5	163,81,110,72,120,	0,680,1082,1663,2566,
#Deleted in new
chr7	127588404	127589574	chr7:127588404-127589574	0	+	127588404	127588404	8553170	3	396,81,90,	0,678,1080,
#Partially deleted in new
chr7	127588412	127591112	chr7:127588412-127591112	0	+	127588412	127588412	8553170	5	153,81,110,72,150,	0,670,1072,1653,2550,
#Deleted in new
chr7	127589044	127589831	chr7:127589044-127589831	0	+	127589044	127589044	8553170	2	119,347,	0,440,
#Partially deleted in new
chr7	127591408	127595468	chr7:127591408-127595468	0	+	127591408	127591408	8553170	2	543,162,	0,3898,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	127591491	127593611	chr7:127591491-127593611	0	-	127591491	127591491	8553170	4	227,192,109,114,	0,321,637,2006,
#Partially deleted in new
chr7	127593634	127602144	chr7:127593634-127602144	3	+	127593853	127600399	789624	7	363,697,119,160,171,206,522,	0,1672,2693,4800,5746,6559,7988,
#Deleted in new
chr7	127593727	127596330	chr7:127593727-127596330	0	+	127595564	127596330	789624	3	25,697,3,	0,1579,2600,
#Deleted in new
chr7	127593741	127595485	chr7:127593741-127595485	0	+	127593853	127594794	789624	4	256,81,180,179,	0,752,1038,1565,
#Deleted in new
chr7	127595440	127596618	chr7:127595440-127596618	0	+	127595440	127595440	8553170	2	563,291,	0,887,
#Partially deleted in new
chr7	127610291	127615726	chr7:127610291-127615726	3	-	127611063	127615520	789624	9	915,142,56,70,83,126,76,216,326,	0,1243,1653,2730,3158,3464,4190,4588,5109,
#Partially deleted in new
chr7	127610291	127618114	chr7:127610291-127618114	1	-	127611063	127615928	789624	12	915,142,56,70,83,126,76,216,131,112,126,153,	0,1243,1653,2730,3158,3464,4190,4588,5109,5624,6983,7670,
#Partially deleted in new
chr7	127610810	127615928	chr7:127610810-127615928	1	-	127610845	127615928	789624	11	41,131,142,56,70,83,126,76,216,131,13,	0,44,724,1134,2211,2639,2945,3671,4069,4590,5105,
#Partially deleted in new
chr7	127610810	127615928	chr7:127610810-127615928	1	-	127610851	127615928	789624	10	175,142,56,70,83,126,76,216,131,13,	0,724,1134,2211,2639,2945,3671,4069,4590,5105,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	127610936	127615670	chr7:127610936-127615670	0	-	127611815	127615209	789624	8	49,314,56,70,83,126,76,791,	0,598,1008,2085,2513,2819,3545,3943,
#Partially deleted in new
chr7	127610937	127615670	chr7:127610937-127615670	1	-	127611063	127615209	789624	8	269,142,56,70,83,126,76,791,	0,597,1007,2084,2512,2818,3544,3942,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	127611750	127615209	chr7:127611750-127615209	0	-	127611750	127611750	8553170	6	250,70,83,126,76,330,	0,1271,1699,2005,2731,3129,
#Partially deleted in new
chr7	127611815	127615670	chr7:127611815-127615670	1	-	127611815	127615209	789624	7	33,56,70,83,126,76,791,	0,129,1206,1634,1940,2666,3064,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	127644684	127652012	chr7:127644684-127652012	3	-	127644684	127644684	8553170	3	43,112,340,	0,371,6988,
#Partially deleted in new
chr7	127652179	128092607	chr7:127652179-128092607	3	+	127652373	128092058	0	24	272,150,121,79,161,92,159,107,91,114,90,101,111,73,142,110,189,142,124,70,114,204,45,615,	0,34433,42648,46695,48983,50255,50985,52659,55377,69107,155304,192144,235722,252567,277008,338767,422322,429180,432544,433531,434758,437309,439657,439813,
#Partially deleted in new
chr7	127652193	127687147	chr7:127652193-127687147	0	+	127652193	127652193	8553170	2	258,535,	0,34419,
#Partially deleted in new
chr7	127679044	127698937	chr7:127679044-127698937	0	+	127679044	127679044	8553170	4	221,150,121,63,	0,7568,15783,19830,
#Partially deleted in new
chr7	127692486	127703191	chr7:127692486-127703191	0	+	127692486	127692486	8553170	6	123,121,79,161,92,27,	0,2341,6388,8676,9948,10678,
#Partially deleted in new
chr7	127694691	127703225	chr7:127694691-127703225	0	+	127694691	127694691	8553170	6	35,121,79,161,92,61,	0,136,4183,6471,7743,8473,
#Partially deleted in new
chr7	127718553	127887949	chr7:127718553-127887949	0	+	127718553	127718553	8553170	5	199,114,90,101,48,	0,2733,88930,125770,169348,
#Partially deleted in new
chr7	127718657	127929227	chr7:127718657-127929227	0	+	127718657	127718657	8553170	7	101,114,90,101,111,73,40,	0,2629,88826,125666,169244,186089,210530,
#Deleted in new
chr7	127857851	127858488	chr7:127857851-127858488	7	-	127857851	127857851	16724991	1	637,	0,
#Partially deleted in new
chr7	127887911	128084850	chr7:127887911-128084850	0	+	127887911	128084850	789624	6	101,73,142,110,142,127,	0,16835,41276,103035,193448,196812,
#Partially deleted in new
chr7	127904354	128074622	chr7:127904354-128074622	0	+	127904354	127904354	8553170	4	124,73,142,121,	0,392,24833,170147,
#Partially deleted in new
chr7	127904625	127990955	chr7:127904625-127990955	0	+	127904625	127904625	8553170	4	194,127,142,9,	0,23434,24562,86321,
#Partially deleted in new
chr7	127949115	128081412	chr7:127949115-128081412	0	+	127949115	127949115	8553170	5	105,110,111,189,53,	0,41831,58918,125386,132244,
#Partially deleted in new
chr7	127990945	127998076	chr7:127990945-127998076	0	+	127990945	127990945	8553170	2	111,605,	0,6526,
#Deleted in new
chr7	127997596	128000077	chr7:127997596-128000077	3	+	127997596	127997596	789624	1	2481,	0,
#Deleted in new
chr7	128027070	128031070	chr7:128027070-128031070	3	-	128028678	128030640	0	2	3670,158,	0,3842,
#Deleted in new
chr7	128030158	128031005	chr7:128030158-128031005	0	-	128030158	128030394	789624	2	464,93,	0,754,
#Deleted in new
chr7	128030356	128032107	chr7:128030356-128032107	0	-	128030356	128030640	789624	3	384,84,93,	0,556,1658,
#Deleted in new
chr7	128030488	128031621	chr7:128030488-128031621	0	-	128030488	128030640	789624	3	252,84,115,	0,424,1018,
#Partially deleted in new
chr7	128042301	128084759	chr7:128042301-128084759	0	+	128042301	128042301	8553170	4	163,189,142,36,	0,32200,39058,42422,
#Deleted in new
chr7	128081860	128081960	chr7:128081860-128081960	3	+	128081860	128081860	5263520	1	100,	0,
#Partially deleted in new
chr7	128086470	128092609	chr7:128086470-128092609	0	+	128086470	128086470	8553170	4	581,204,45,617,	0,3018,5366,5522,
#Partially deleted in new
chr7	128089488	128092207	chr7:128089488-128092207	0	+	128089488	128089488	8553170	3	337,45,215,	0,2348,2504,
#Deleted in new
chr7	128207871	128207943	chr7:128207871-128207943	3	+	128207871	128207871	5263520	1	72,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	128241283	128257628	chr7:128241283-128257628	3	+	128252018	128254763	0	3	23,172,3225,	0,10707,13120,
#Deleted in new
chr7	128264525	128264889	chr7:128264525-128264889	3	-	128264525	128264525	8553170	1	364,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr7	128297684	128343908	chr7:128297684-128343908	3	-	128310796	128343793	789624	19	13247,100,257,75,150,159,65,136,74,110,73,137,196,72,93,76,95,159,233,	0,15490,17079,19974,20272,23581,25842,26874,28133,33134,35605,37858,38162,39446,40565,41041,41542,41948,45991,
#Deleted in new
chr7	128306648	128307678	chr7:128306648-128307678	7	+	128306648	128306648	16724991	1	1030,	0,
#Partially deleted in new
chr7	128310396	128321425	chr7:128310396-128321425	0	-	128310396	128310396	8553170	4	535,100,257,160,	0,2778,4367,10869,
#Partially deleted in new
chr7	128310479	128343870	chr7:128310479-128343870	1	-	128310796	128343793	789624	15	452,100,257,75,150,159,65,136,74,110,73,137,196,72,195,	0,2695,4284,7179,7477,10786,13047,14079,15338,20339,22810,25063,25367,26651,33196,
#Partially deleted in new
chr7	128313087	128314971	chr7:128313087-128314971	0	-	128313087	128313087	8553170	2	187,208,	0,1676,
#Partially deleted in new
chr7	128323558	128337160	chr7:128323558-128337160	0	-	128324680	128337160	789624	7	33,136,110,73,137,196,30,	0,1000,7260,9731,11984,12288,13572,
#Partially deleted in new
chr7	128335544	128343874	chr7:128335544-128343874	0	-	128335544	128343793	789624	7	135,196,72,76,95,159,199,	0,302,1586,3181,3682,4088,8131,
#Partially deleted in new
chr7	128335546	128337204	chr7:128335546-128337204	0	-	128335546	128335546	8553170	2	496,74,	0,1584,
#Partially deleted in new
chr7	128338279	128343908	chr7:128338279-128343908	0	-	128338279	128343793	789624	6	63,76,95,159,102,233,	0,446,947,1353,2838,5396,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	128344080	128344142	chr7:128344080-128344142	3	+	128344080	128344080	8553170	1	62,	0,
#Partially deleted in new
chr7	128350324	128361604	chr7:128350324-128361604	3	-	128351231	128359991	789624	6	1090,230,120,105,724,44,	0,2124,8356,8824,9015,11236,
#Partially deleted in new
chr7	128350325	128361685	chr7:128350325-128361685	1	-	128350855	128359991	789624	6	2353,120,105,724,117,125,	0,8355,8823,9014,10980,11235,
#Partially deleted in new
chr7	128350353	128359635	chr7:128350353-128359635	0	-	128350884	128359635	789624	4	1325,63,105,296,	0,8384,8795,8986,
#Partially deleted in new
chr7	128350855	128361685	chr7:128350855-128361685	1	-	128350855	128359991	789624	5	1823,120,105,724,125,	0,7825,8293,8484,10705,
#Partially deleted in new
chr7	128352116	128361681	chr7:128352116-128361681	0	-	128352116	128359991	789624	5	562,120,105,724,376,	0,6564,7032,7223,9189,
#Deleted in new
chr7	128359366	128361629	chr7:128359366-128361629	0	-	128359366	128359991	789624	3	697,117,69,	0,1939,2194,
#Deleted in new
chr7	128359374	128361685	chr7:128359374-128361685	0	-	128359374	128359991	789624	2	689,125,	0,2186,
#Partially deleted in new
chr7	128392276	128410252	chr7:128392276-128410252	3	-	128393006	128409901	789624	17	752,84,144,145,144,96,91,200,88,207,75,102,49,99,64,44,497,	0,2001,2179,2612,2854,4323,4655,6137,7818,8056,8540,8738,11429,13490,17012,17164,17479,
#Partially deleted in new
chr7	128392276	128409901	chr7:128392276-128409901	1	-	128393006	128409901	789624	16	752,84,144,145,144,96,91,200,88,207,75,102,49,64,44,146,	0,2001,2179,2612,2854,4323,4655,6137,7818,8056,8540,8738,11429,17012,17164,17479,
#Partially deleted in new
chr7	128392276	128405865	chr7:128392276-128405865	0	-	128400162	128405865	789624	14	752,84,144,145,144,96,91,200,110,204,75,102,49,99,	0,2001,2179,2612,2854,4323,4655,6137,7818,8056,8540,8738,11429,13490,
#Partially deleted in new
chr7	128392276	128409486	chr7:128392276-128409486	0	-	128400162	128409486	789624	17	752,17,84,144,145,144,96,91,200,110,204,75,102,49,99,64,46,	0,1445,2001,2179,2612,2854,4323,4655,6137,7818,8056,8540,8738,11429,13490,17012,17164,
#Partially deleted in new
chr7	128392277	128409982	chr7:128392277-128409982	1	-	128393006	128409901	789624	16	751,84,144,145,144,96,91,200,88,207,75,102,49,99,78,227,	0,2000,2178,2611,2853,4322,4654,6136,7817,8055,8539,8737,11428,13489,17011,17478,
#Partially deleted in new
chr7	128392277	128405948	chr7:128392277-128405948	1	-	128393006	128405864	789624	13	751,84,144,145,144,96,91,200,88,207,102,49,182,	0,2000,2178,2611,2853,4322,4654,6136,7817,8055,8737,11428,13489,
#Partially deleted in new
chr7	128392292	128410252	chr7:128392292-128410252	1	-	128393006	128405864	789624	17	736,84,144,145,144,96,91,200,88,204,75,102,49,99,64,44,497,	0,1985,2163,2596,2838,4307,4639,6121,7802,8040,8524,8722,11413,13474,16996,17148,17463,
#Partially deleted in new
chr7	128392300	128409982	chr7:128392300-128409982	1	-	128393006	128409901	789624	15	728,84,144,145,144,96,91,200,88,207,75,102,49,99,227,	0,1977,2155,2588,2830,4299,4631,6113,7794,8032,8516,8714,11405,13466,17455,
#Partially deleted in new
chr7	128392738	128405942	chr7:128392738-128405942	1	-	128393006	128405864	789624	14	290,84,144,145,144,96,91,200,88,204,75,102,49,176,	0,1539,1717,2150,2392,3861,4193,5675,7356,7594,8078,8276,10967,13028,
#Partially deleted in new
chr7	128392849	128405942	chr7:128392849-128405942	1	-	128393006	128405864	789624	14	179,84,144,145,144,96,91,200,88,207,60,102,49,176,	0,1428,1606,2039,2281,3750,4082,5564,7245,7483,7982,8165,10856,12917,
#Partially deleted in new
chr7	128392849	128403754	chr7:128392849-128403754	0	-	128392927	128403754	8553170	14	179,17,84,144,145,144,96,91,200,88,207,60,102,49,	0,872,1428,1606,2039,2281,3750,4082,5564,7245,7483,7982,8165,10856,
#Deleted in new
chr7	128394274	128395171	chr7:128394274-128395171	0	-	128394274	128394274	8553170	3	87,543,41,	0,181,856,
#Partially deleted in new
chr7	128398413	128409986	chr7:128398413-128409986	0	-	128398413	128409901	789624	7	200,88,207,75,102,49,231,	0,1681,1919,2403,2601,5292,11342,
#Partially deleted in new
chr7	128398489	128400685	chr7:128398489-128400685	0	-	128398489	128398489	8553170	3	124,110,353,	0,1605,1843,
#Partially deleted in new
chr7	128400134	128409947	chr7:128400134-128409947	0	-	128400134	128409901	789624	5	48,207,102,49,192,	0,198,880,3571,9621,
#Partially deleted in new
chr7	128400671	128405939	chr7:128400671-128405939	0	-	128400671	128400671	8553170	4	220,102,49,173,	0,343,3034,5095,
#Partially deleted in new
chr7	128400816	128409982	chr7:128400816-128409982	0	-	128400816	128400816	8553170	6	75,102,49,99,196,227,	0,198,2889,4950,8472,8939,
#Partially deleted in new
chr7	128400842	128409982	chr7:128400842-128409982	0	-	128409288	128409901	789624	6	49,102,49,99,64,227,	0,172,2863,4924,8446,8913,
#Deleted in new
chr7	128433421	128433713	chr7:128433421-128433713	7	-	128433421	128433421	16724991	1	292,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	128443448	128443510	chr7:128443448-128443510	3	-	128443448	128443448	8553170	1	62,	0,
#Partially deleted in new
chr7	128455839	128493859	chr7:128455839-128493859	3	+	128455839	128455839	8553170	5	184,356,50,61,56,	0,23318,24807,32261,37964,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	128455848	128457924	chr7:128455848-128457924	1	+	128457268	128457460	789624	2	61,724,	0,1352,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	128455890	128458416	chr7:128455890-128458416	3	+	128457268	128457460	789624	2	133,1216,	0,1310,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	128455902	128458418	chr7:128455902-128458418	0	+	128455902	128455902	8553170	2	798,572,	0,1944,
#Partially deleted in new
chr7	128455936	128469197	chr7:128455936-128469197	3	+	128455936	128455936	8553170	4	87,99,123,353,	0,1264,10626,12908,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	128456358	128458415	chr7:128456358-128458415	0	+	128456358	128456358	8553170	2	342,562,	0,1495,
#Partially deleted in new
chr7	128466562	128469171	chr7:128466562-128469171	7	+	128466562	128466562	16724991	2	123,327,	0,2282,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	128476728	128502924	chr7:128476728-128502924	3	+	128476765	128501916	789624	9	147,92,356,50,61,140,107,66,1163,	0,353,2429,3918,11372,17075,21307,24174,25033,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	128476728	128502126	chr7:128476728-128502126	0	+	128476728	128476728	8553170	8	445,356,50,61,140,107,66,365,	0,2429,3918,11372,17075,21307,24174,25033,
#Partially deleted in new
chr7	128476748	128498142	chr7:128476748-128498142	0	+	128476765	128477977	789624	8	127,92,44,356,50,61,140,107,	0,333,1200,2409,3898,11352,17055,21287,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	128476753	128506602	chr7:128476753-128506602	1	+	128476868	128501916	789624	8	122,356,50,61,140,107,66,4841,	0,2404,3893,11347,17050,21282,24149,25008,
#Partially deleted in new
chr7	128479462	128483390	chr7:128479462-128483390	0	+	128479462	128479462	8553170	3	51,50,364,	0,1184,3564,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	128479488	128488597	chr7:128479488-128488597	0	+	128479488	128488505	789624	4	25,50,61,275,	0,1158,8612,8834,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	128483906	128484158	chr7:128483906-128484158	3	-	128483906	128483906	8553170	1	252,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	128493842	128502832	chr7:128493842-128502832	0	+	128493842	128502721	789624	5	101,107,66,71,219,	0,4193,7060,7919,8771,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	128524015	128531069	chr7:128524015-128531069	3	-	128524015	128524015	8553170	1	7054,	0,
#Partially deleted in new
chr7	128533651	128615970	chr7:128533651-128615970	7	+	128533651	128533651	16724991	9	79,72,70,44,96,168,96,93,111,	0,41068,44312,45238,46347,58198,74466,75835,82208,
#Partially deleted in new
chr7	128570240	128570688	chr7:128570240-128570688	7	-	128570240	128570240	16724991	1	448,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	128574750	128626473	chr7:128574750-128626473	3	+	128574750	128574750	8553170	13	41,44,96,168,96,93,111,110,132,216,207,59,179,	0,4139,5248,17099,33367,34736,41109,43117,44295,47728,48824,51046,51544,
#Partially deleted in new
chr7	128617864	128625905	chr7:128617864-128625905	7	+	128617864	128617864	16724991	3	109,69,103,	0,5706,7938,
#Deleted in new
chr7	128627171	128627275	chr7:128627171-128627275	3	+	128627171	128627171	8553170	1	104,	0,
#Deleted in new
chr7	128651184	128652334	chr7:128651184-128652334	7	+	128651184	128651184	16724991	1	1150,	0,
#Deleted in new
chr7	128652840	128653243	chr7:128652840-128653243	7	+	128652840	128652840	16724991	1	403,	0,
#Deleted in new
chr7	128653689	128654019	chr7:128653689-128654019	7	-	128653689	128653689	16724991	1	330,	0,
#Deleted in new
chr7	128653968	128654722	chr7:128653968-128654722	7	+	128653968	128653968	16724991	1	754,	0,
#Deleted in new
chr7	128655961	128658791	chr7:128655961-128658791	7	-	128655961	128655961	16724991	2	925,1807,	0,1023,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	128667042	128668156	chr7:128667042-128668156	3	+	128667042	128667042	8553170	1	1114,	0,
#Partially deleted in new
chr7	128669086	128669892	chr7:128669086-128669892	7	-	128669086	128669086	16724991	2	83,49,	0,757,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	128672291	128687872	chr7:128672291-128687872	3	+	128672397	128683159	789624	5	259,212,250,119,4909,	0,3356,5272,7739,10672,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	128672291	128684246	chr7:128672291-128684246	0	+	128672397	128683159	789624	6	259,185,250,119,292,424,	0,3383,5272,7739,10672,11531,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	128672292	128684246	chr7:128672292-128684246	0	+	128672397	128683159	789624	6	258,185,250,119,346,424,	0,3382,5271,7738,10671,11530,
#Partially deleted in new
chr7	128672298	128683134	chr7:128672298-128683134	1	+	128672397	128682989	789624	4	252,212,119,171,	0,3349,7732,10665,
#Partially deleted in new
chr7	128672397	128683159	chr7:128672397-128683159	1	+	128672397	128683159	789624	5	153,185,250,119,196,	0,3277,5166,7633,10566,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	128683040	128686875	chr7:128683040-128686875	0	+	128683040	128683040	8553170	2	215,315,	0,3520,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	128690450	128691717	chr7:128690450-128691717	3	+	128690450	128690450	8553170	1	1267,	0,
#Deleted in new
chr7	128693449	128693924	chr7:128693449-128693924	7	+	128693449	128693449	16724991	1	475,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	128697438	128697556	chr7:128697438-128697556	7	+	128697438	128697438	16724991	1	118,	0,
#Partially deleted in new
chr7	128709060	128731611	chr7:128709060-128731611	1	+	128714119	128731113	789624	8	147,210,185,192,122,38,168,512,	0,4862,7752,9831,14136,17773,20841,22039,
#Partially deleted in new
chr7	128709074	128731623	chr7:128709074-128731623	0	+	128716931	128724820	789624	9	133,152,185,192,122,304,38,168,524,	0,4848,7738,9817,14122,15694,17759,20827,22025,
#Partially deleted in new
chr7	128709089	128724967	chr7:128709089-128724967	0	+	128709089	128709089	8553170	6	118,87,185,156,122,199,	0,4833,7723,9838,14107,15679,
#Partially deleted in new
chr7	128709089	128723426	chr7:128709089-128723426	0	+	128709089	128709089	8553170	5	118,87,185,253,230,	0,4833,7723,9741,14107,
#Partially deleted in new
chr7	128713890	128731743	chr7:128713890-128731743	1	+	128714119	128731113	789624	7	242,185,192,122,38,168,644,	0,2922,5001,9306,12943,16011,17209,
#Partially deleted in new
chr7	128715388	128731743	chr7:128715388-128731743	3	+	128715441	128731113	789624	7	302,185,253,122,44,168,644,	0,1424,3442,7808,11439,14513,15711,
#Partially deleted in new
chr7	128715388	128726868	chr7:128715388-128726868	0	+	128715441	128724820	789624	6	302,185,253,122,304,35,	0,1424,3442,7808,9380,11445,
#Partially deleted in new
chr7	128715404	128719082	chr7:128715404-128719082	0	+	128715404	128715404	8553170	3	286,185,191,	0,1408,3487,
#Partially deleted in new
chr7	128718828	128726854	chr7:128718828-128726854	0	+	128718828	128726854	789624	3	255,122,27,	0,4368,7999,
#Partially deleted in new
chr7	128739291	128771477	chr7:128739291-128771477	1	+	128748583	128769094	789624	6	141,232,194,167,61,2415,	0,9281,14970,19579,20500,29771,
#Partially deleted in new
chr7	128739291	128771477	chr7:128739291-128771477	1	+	128748354	128769167	789624	8	141,815,232,194,167,61,200,2415,	0,8261,9281,15237,19579,20500,28164,29771,
#Partially deleted in new
chr7	128739341	128771474	chr7:128739341-128771474	1	+	128748583	128769167	789624	7	91,232,194,167,61,200,2412,	0,9231,14920,19529,20450,28114,29721,
#Partially deleted in new
chr7	128739362	128770576	chr7:128739362-128770576	3	+	128748583	128769167	789624	7	70,232,194,167,61,200,1514,	0,9210,15166,19508,20429,28093,29700,
#Partially deleted in new
chr7	128739403	128769936	chr7:128739403-128769936	1	+	128748354	128769167	789624	8	29,815,232,194,167,61,200,874,	0,8149,9169,14858,19467,20388,28052,29659,
#Partially deleted in new
chr7	128758961	128771807	chr7:128758961-128771807	0	+	128758961	128769167	789624	5	76,61,200,134,118,	0,830,8494,10101,12728,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	128761337	128761598	chr7:128761337-128761598	3	+	128761337	128761337	8553170	1	261,	0,
#Partially deleted in new
chr7	128772490	128775790	chr7:128772490-128775790	3	-	128772539	128775790	0	5	169,240,166,169,352,	0,1158,2007,2495,2948,
#Partially deleted in new
chr7	128790756	128801250	chr7:128790756-128801250	0	+	128792411	128801250	789624	5	220,108,255,75,65,	0,1563,3591,3937,10429,
#Partially deleted in new
chr7	128791409	128794728	chr7:128791409-128794728	0	+	128792411	128794728	789624	5	142,84,108,255,35,	0,690,910,2938,3284,
#Partially deleted in new
chr7	128791443	128822127	chr7:128791443-128822127	1	+	128791493	128817859	789624	10	108,108,255,75,288,112,166,141,107,329,	0,876,2904,3250,9742,13206,13915,14317,26314,30355,
#Partially deleted in new
chr7	128791449	128822128	chr7:128791449-128822128	1	+	128791493	128817859	789624	10	102,108,255,75,324,112,166,141,107,330,	0,870,2898,3244,9736,13200,13909,14311,26308,30349,
#Deleted in new
chr7	128791457	128792428	chr7:128791457-128792428	0	+	128792411	128792428	8553170	2	94,159,	0,812,
#Partially deleted in new
chr7	128791617	128794522	chr7:128791617-128794522	0	+	128792411	128794522	789624	3	269,108,175,	0,702,2730,
#Partially deleted in new
chr7	128792017	128822119	chr7:128792017-128822119	1	+	128792411	128817859	789624	11	410,255,75,324,112,166,141,171,186,107,321,	0,2330,2676,9168,12632,13341,13743,14670,15342,25740,29781,
#Partially deleted in new
chr7	128792044	128822130	chr7:128792044-128822130	3	+	128792411	128817859	789624	18	383,255,75,324,112,166,141,159,171,186,195,228,513,222,282,318,107,332,	0,2303,2649,9141,12605,13314,13716,14192,14643,15315,17405,18094,19755,20663,22593,23569,25713,29754,
#Partially deleted in new
chr7	128801185	128822130	chr7:128801185-128822130	0	+	128801185	128801185	8553170	14	324,112,166,141,622,186,195,228,91,513,222,282,318,332,	0,3464,4173,4575,5051,6174,8264,8953,10076,10614,11522,13452,14428,20613,
#Partially deleted in new
chr7	128801209	128822125	chr7:128801209-128822125	0	+	128801209	128821909	789624	14	300,112,166,141,159,171,186,195,228,513,222,282,318,327,	0,3440,4149,4551,5027,5478,6150,8240,8929,10590,11498,13428,14404,20589,
#Partially deleted in new
chr7	128805847	128818268	chr7:128805847-128818268	0	+	128805847	128805847	8553170	2	54,511,	0,11910,
#Partially deleted in new
chr7	128806374	128822132	chr7:128806374-128822132	0	+	128806374	128821909	789624	8	21,171,186,195,228,513,222,334,	0,313,985,3075,3764,5425,6333,15424,
#Deleted in new
chr7	128806746	128807833	chr7:128806746-128807833	0	+	128806746	128806746	8553170	2	112,474,	0,613,
#Deleted in new
chr7	128809166	128810196	chr7:128809166-128810196	0	+	128809166	128809166	8553170	2	478,58,	0,972,
#Partially deleted in new
chr7	128814648	128821885	chr7:128814648-128821885	0	+	128814648	128814648	8553170	3	271,137,87,	0,1146,7150,
#Partially deleted in new
chr7	128830376	128859272	chr7:128830376-128859272	1	+	128830637	128858523	0	48	613,249,98,151,119,78,163,201,138,127,137,194,114,144,124,161,91,170,118,263,598,174,163,161,168,124,157,190,24,248,99,100,141,129,174,162,204,153,123,243,270,138,116,133,177,219,210,937,	0,4949,6783,7021,7260,7610,7890,8226,9646,10171,10457,10793,11077,11854,12198,12417,12852,13031,13419,13627,14281,15613,15924,16368,17320,17568,18184,18416,18804,18954,19599,20007,20426,20855,21078,22214,22451,23092,23338,23597,24036,24398,24822,26141,26368,26741,27631,27959,
#Partially deleted in new
chr7	128830425	128859274	chr7:128830425-128859274	3	+	128830637	128858523	0	47	564,249,98,151,119,78,163,201,138,127,137,194,114,144,124,161,91,170,118,263,598,174,163,161,168,124,157,190,24,248,100,141,129,174,162,204,153,123,243,270,138,116,133,177,219,210,939,	0,4900,6734,6972,7211,7561,7841,8177,9597,10122,10408,10744,11028,11805,12149,12368,12803,12982,13370,13578,14232,15564,15875,16319,17271,17519,18135,18367,18755,18905,19958,20377,20806,21029,22165,22402,23043,23289,23548,23987,24349,24773,26092,26319,26692,27582,27910,
#Deleted in new
chr7	128841330	128842858	chr7:128841330-128842858	0	+	128841330	128841330	8553170	4	237,144,124,65,	0,900,1244,1463,
#Partially deleted in new
chr7	128850161	128862626	chr7:128850161-128862626	3	-	128850161	128850161	789624	4	244,100,113,102,	0,1239,3123,12363,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	128862450	128880923	chr7:128862450-128880923	0	-	128862450	128862450	8553170	10	562,109,153,87,165,102,112,173,143,305,	0,2451,11845,12073,16107,17071,17267,17462,17935,18168,
#Partially deleted in new
chr7	128862825	128865843	chr7:128862825-128865843	3	+	128862904	128865578	789624	2	237,467,	0,2551,
#Partially deleted in new
chr7	128862903	128865844	chr7:128862903-128865844	1	+	128862904	128865578	789624	3	159,84,468,	0,2216,2473,
#Partially deleted in new
chr7	128866307	128872044	chr7:128866307-128872044	3	+	128866409	128868775	789624	2	523,3379,	0,2358,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	128873814	128879812	chr7:128873814-128879812	0	-	128873814	128873814	8553170	4	634,87,1066,95,	0,709,4743,5903,
#Partially deleted in new
chr7	128876864	128910719	chr7:128876864-128910719	1	-	128877042	128910676	789624	40	447,307,165,102,112,173,143,103,89,100,80,121,83,174,94,83,91,86,177,171,192,94,83,174,94,107,153,82,86,94,80,94,83,94,83,85,77,190,143,119,	0,619,1693,2657,2853,3048,3521,3754,4132,4761,5072,7137,7916,8232,9599,9790,10011,10350,11998,13478,14040,14320,14586,14781,15649,15823,16004,16373,16526,16941,17111,17335,25912,26862,27191,29414,30236,30399,31561,33736,
#Partially deleted in new
chr7	128876939	128910719	chr7:128876939-128910719	0	-	128879547	128910676	789624	37	372,307,165,102,173,143,100,80,121,83,174,94,83,91,86,177,171,192,94,83,174,94,107,153,82,86,94,80,94,83,94,83,97,77,190,143,119,	0,544,1618,2582,2973,3446,4686,4997,7062,7841,8157,9524,9715,9936,10275,11923,13403,13965,14245,14511,14706,15574,15748,15929,16298,16451,16866,17036,17260,25837,26787,27116,27344,30161,30324,31486,33661,
#Partially deleted in new
chr7	128876939	128910719	chr7:128876939-128910719	3	-	128877042	128910676	789624	38	372,307,165,102,112,173,143,100,80,121,83,174,94,83,91,86,177,171,192,94,83,174,94,107,153,82,86,94,80,94,83,94,83,97,77,190,143,119,	0,544,1618,2582,2778,2973,3446,4686,4997,7062,7841,8157,9524,9715,9936,10275,11923,13403,13965,14245,14511,14706,15574,15748,15929,16298,16451,16866,17036,17260,25837,26787,27116,27344,30161,30324,31486,33661,
#Partially deleted in new
chr7	128877042	128910676	chr7:128877042-128910676	1	-	128877042	128910676	789624	36	269,307,165,102,112,173,143,100,80,121,83,174,94,83,91,86,177,171,183,94,83,174,94,107,153,82,86,94,80,94,83,91,77,190,143,76,	0,441,1515,2479,2675,2870,3343,4583,4894,6959,7738,8054,9421,9612,9833,10172,11820,13300,13862,14142,14408,14603,15471,15645,15826,16195,16348,16763,16933,17157,25734,27247,30058,30221,31383,33558,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr7	128889946	128910719	chr7:128889946-128910719	0	-	128889946	128889946	8553170	21	567,192,94,83,174,94,107,153,82,86,94,80,94,83,94,83,85,77,190,143,119,	0,958,1238,1504,1699,2567,2741,2922,3291,3444,3859,4029,4253,12830,13780,14109,16332,17154,17317,18479,20654,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	128889946	128903352	chr7:128889946-128903352	0	-	128889946	128889946	8553170	14	567,192,94,83,174,94,107,153,82,86,250,94,83,189,	0,958,1238,1504,1699,2567,2741,2922,3291,3444,3859,4253,12830,13217,
#Deleted in new
chr7	128912731	128914063	chr7:128912731-128914063	7	-	128912731	128912731	16724991	3	115,210,218,	0,233,1114,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	128937611	128950027	chr7:128937611-128950027	3	+	128942081	128948818	0	9	223,206,190,62,34,306,393,119,1455,	0,4459,8233,8889,9411,9618,10117,10598,10961,
#Partially deleted in new
chr7	128937936	128946942	chr7:128937936-128946942	0	+	128937936	128937936	8553170	4	113,206,162,442,	0,4134,7908,8564,
#Partially deleted in new
chr7	128937939	128948832	chr7:128937939-128948832	1	+	128942081	128948818	0	9	110,206,190,62,34,306,393,119,260,	0,4131,7905,8561,9083,9290,9789,10270,10633,
#Partially deleted in new
chr7	128937939	128948832	chr7:128937939-128948832	1	+	128942081	128948818	0	8	110,206,190,62,34,393,119,260,	0,4131,7905,8561,9083,9789,10270,10633,
#Partially deleted in new
chr7	128937939	128947256	chr7:128937939-128947256	1	+	128942081	128947256	789624	5	110,206,190,62,27,	0,4131,7905,8561,9290,
#Partially deleted in new
chr7	128937961	128946540	chr7:128937961-128946540	0	+	128942081	128946540	789624	5	88,113,206,190,40,	0,3317,4109,7883,8539,
#Partially deleted in new
chr7	128937971	128945967	chr7:128937971-128945967	0	+	128942081	128945967	789624	4	78,146,206,123,	0,3307,4099,7873,
#Partially deleted in new
chr7	128937980	128947745	chr7:128937980-128947745	0	+	128937980	128937980	8553170	6	69,206,190,62,513,17,	0,4090,7864,8520,9042,9748,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	128937988	128950035	chr7:128937988-128950035	1	+	128942081	128948818	0	9	61,206,190,62,34,258,393,119,1463,	0,4082,7856,8512,9034,9289,9740,10221,10584,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	128938216	128950030	chr7:128938216-128950030	1	+	128942081	128948818	0	9	29,206,190,62,34,258,393,119,1458,	0,3854,7628,8284,8806,9061,9512,9993,10356,
#Deleted in new
chr7	128940205	128942259	chr7:128940205-128942259	0	+	128942081	128942259	789624	3	258,113,189,	0,1073,1865,
#Partially deleted in new
chr7	128940671	128949388	chr7:128940671-128949388	1	+	128942081	128948818	0	9	204,206,190,62,34,258,393,119,816,	0,1399,5173,5829,6351,6606,7057,7538,7901,
#Partially deleted in new
chr7	128940837	128949388	chr7:128940837-128949388	0	+	128942081	128947047	0	9	38,206,162,62,34,258,393,119,816,	0,1233,5007,5663,6185,6440,6891,7372,7735,
#Partially deleted in new
chr7	128940837	128948982	chr7:128940837-128948982	1	+	128942081	128947047	0	10	38,206,162,62,34,29,199,393,119,410,	0,1233,5007,5663,6185,6440,6499,6891,7372,7735,
#Deleted in new
chr7	128952526	128953316	chr7:128952526-128953316	3	-	128952526	128952526	8553170	1	790,	0,
#Partially deleted in new
chr7	128954179	129054914	chr7:128954179-129054914	3	-	128957254	129054770	0	23	1206,92,113,168,157,95,117,141,61,77,92,192,140,92,108,147,139,176,144,157,74,201,264,	0,3044,13100,15968,18246,20688,21639,24803,25791,28068,29988,32549,35781,37819,39627,43209,46249,46879,50836,60799,62803,63777,100471,
#Partially deleted in new
chr7	128954179	129055173	chr7:128954179-129055173	1	-	128957254	129054770	789624	23	1206,92,113,168,157,95,117,141,61,77,92,192,242,92,108,147,139,176,144,157,74,201,523,	0,3044,13100,15968,18246,20688,21639,24803,25791,28068,29988,32549,35781,37819,39627,43209,46249,46879,50836,60799,62803,63777,100471,
#Partially deleted in new
chr7	128955087	129055144	chr7:128955087-129055144	1	-	128957254	129054770	0	22	298,92,113,168,157,95,117,141,61,77,92,140,92,108,147,139,176,144,157,74,201,494,	0,2136,12192,15060,17338,19780,20731,23895,24883,27160,29080,34873,36911,38719,42301,45341,45971,49928,59891,61895,62869,99563,
#Partially deleted in new
chr7	128955087	129055093	chr7:128955087-129055093	1	-	128957254	129018079	789624	24	298,92,113,168,157,95,117,141,61,77,92,192,140,92,108,147,139,176,144,157,74,201,161,443,	0,2136,12192,15060,17338,19780,20731,23895,24883,27160,29080,31641,34873,36911,38719,42301,45341,45971,49928,59891,61895,62869,86469,99563,
#Partially deleted in new
chr7	128957222	129054883	chr7:128957222-129054883	1	-	128957254	129054770	789624	22	93,113,168,157,95,117,141,61,77,92,192,242,92,108,147,139,176,144,157,74,201,233,	0,10057,12925,15203,17645,18596,21760,22748,25025,26945,29506,32738,34776,36584,40166,43206,43836,47793,57756,59760,60734,97428,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	128970733	128971029	chr7:128970733-128971029	3	+	128970733	128970733	8553170	1	296,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	129028888	129030527	chr7:129028888-129030527	7	+	129028888	129028888	16724991	1	1639,	0,
#Deleted in new
chr7	129055222	129057239	chr7:129055222-129057239	5	+	129055222	129055222	16724991	1	2017,	0,
#Deleted in new
chr7	129056018	129056770	chr7:129056018-129056770	7	+	129056018	129056018	16724991	1	752,	0,
#Deleted in new
chr7	129066020	129066462	chr7:129066020-129066462	7	-	129066020	129066020	16724991	1	442,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	129095300	129095811	chr7:129095300-129095811	7	-	129095300	129095300	16724991	2	190,169,	0,342,
#Partially deleted in new
chr7	129096026	129096735	chr7:129096026-129096735	7	-	129096026	129096026	16724991	2	88,307,	0,402,
#Deleted in new
chr7	129117512	129117827	chr7:129117512-129117827	7	-	129117512	129117512	16724991	1	315,	0,
#Partially deleted in new
chr7	129126517	129130793	chr7:129126517-129130793	3	+	129126517	129130748	789624	2	1116,147,	0,4129,
#Partially deleted in new
chr7	129144891	129168796	chr7:129144891-129168796	3	+	129144980	129167874	789624	8	191,58,128,75,96,129,162,1024,	0,16787,17502,17941,19582,21886,22507,22881,
#Partially deleted in new
chr7	129162449	129164810	chr7:129162449-129164810	0	+	129162449	129162449	8553170	3	72,75,337,	0,383,2024,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	129164848	129164961	chr7:129164848-129164961	3	+	129164848	129164848	8553170	1	113,	0,
#Deleted in new
chr7	129166439	129168830	chr7:129166439-129168830	0	+	129166439	129166439	8553170	3	467,162,1058,	0,959,1333,
#Deleted in new
chr7	129168211	129169697	chr7:129168211-129169697	0	+	129168211	129168211	8553170	2	198,274,	0,1212,
#Partially deleted in new
chr7	129188871	129213545	chr7:129188871-129213545	3	+	129189151	129212451	0	12	611,206,210,173,220,124,93,109,186,149,135,1522,	0,14512,16331,16738,17278,17592,19887,20417,21491,22093,22764,23152,
#Partially deleted in new
chr7	129206149	129211128	chr7:129206149-129211128	0	+	129206149	129210379	789624	5	220,124,93,186,164,	0,314,2609,4213,4815,
#Partially deleted in new
chr7	129206284	129209281	chr7:129206284-129209281	0	+	129206284	129206284	8553170	3	85,124,523,	0,179,2474,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	129209774	129213545	chr7:129209774-129213545	3	-	129209774	129209774	8553170	2	406,129,	0,3642,
#Deleted in new
chr7	129210507	129212152	chr7:129210507-129212152	0	+	129210507	129211405	789624	5	41,149,128,135,129,	0,457,875,1128,1516,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr7	129225022	129430211	chr7:129225022-129430211	3	+	129225076	129427045	0	17	417,112,144,101,103,95,107,117,64,89,71,95,99,69,79,121,3173,	0,154615,164033,164611,172199,175267,178356,180074,180813,181355,184453,188571,197817,199851,200040,201420,202016,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr7	129225049	129430211	chr7:129225049-129430211	1	+	129225076	129427045	0	17	390,109,144,101,103,95,107,117,64,89,71,95,99,69,79,121,3173,	0,154591,164006,164584,172172,175240,178329,180047,180786,181328,184426,188544,197790,199824,200013,201393,201989,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	129351502	129397269	chr7:129351502-129397269	0	+	129351502	129351502	8553170	5	159,112,144,101,48,	0,28135,37553,38131,45719,
#Partially deleted in new
chr7	129368122	129389113	chr7:129368122-129389113	0	+	129368494	129389113	789624	3	429,112,58,	0,11515,20933,
#Partially deleted in new
chr7	129368140	129427211	chr7:129368140-129427211	1	+	129368494	129427045	0	17	411,109,144,101,103,95,107,117,64,89,71,95,99,69,79,121,173,	0,11500,20915,21493,29081,32149,35238,36956,37695,38237,41335,45453,54699,56733,56922,58302,58898,
#Partially deleted in new
chr7	129375642	129427175	chr7:129375642-129427175	1	+	129375869	129427045	0	17	284,109,144,101,103,95,107,117,64,89,71,95,99,69,79,121,137,	0,3998,13413,13991,21579,24647,27736,29454,30193,30735,33833,37951,47197,49231,49420,50800,51396,
#Partially deleted in new
chr7	129375836	129400320	chr7:129375836-129400320	0	+	129375869	129400320	789624	6	90,112,144,101,103,31,	0,3801,13219,13797,21385,24453,
#Partially deleted in new
chr7	129377537	129427212	chr7:129377537-129427212	0	+	129377537	129427045	789624	17	86,109,144,101,103,95,107,117,64,89,71,95,99,69,79,121,174,	0,2103,11518,12096,19684,22752,25841,27559,28298,28840,31938,36056,45302,47336,47525,48905,49501,
#Partially deleted in new
chr7	129388092	129397319	chr7:129388092-129397319	0	+	129388092	129388092	8553170	5	153,131,144,101,98,	0,717,963,1541,9129,
#Partially deleted in new
chr7	129388806	129400361	chr7:129388806-129400361	0	+	129388806	129388806	8553170	4	393,101,103,72,	0,827,8415,11483,
#Partially deleted in new
chr7	129400299	129405508	chr7:129400299-129405508	0	+	129400299	129400299	8553170	3	85,107,412,	0,3079,4797,
#Deleted in new
chr7	129410112	129410370	chr7:129410112-129410370	7	-	129410112	129410112	16724991	1	258,	0,
#Deleted in new
chr7	129424726	129427220	chr7:129424726-129427220	0	+	129424726	129424726	8553170	4	216,79,121,182,	0,336,1716,2312,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr7	129434432	129488399	chr7:129434432-129488399	3	+	129434472	129485829	789624	21	169,70,75,135,121,69,107,128,204,236,66,64,72,75,98,127,101,67,105,205,2821,	0,5589,9591,17180,18794,19709,19988,20811,22006,23782,24279,25084,25868,28533,29611,30179,32917,36216,46352,48409,51146,
#Partially deleted in new
chr7	129434445	129483631	chr7:129434445-129483631	1	+	129434472	129483069	789624	20	156,70,75,135,121,69,107,128,204,236,66,64,72,75,98,127,101,67,105,790,	0,5576,9578,17167,18781,19696,19975,20798,21993,23769,24266,25071,25855,28520,29598,30166,32904,36203,46339,48396,
#Deleted in new
chr7	129458241	129460548	chr7:129458241-129460548	0	+	129458241	129458241	8553170	4	209,66,64,248,	0,470,1275,2059,
#Deleted in new
chr7	129477874	129478101	chr7:129477874-129478101	7	+	129477874	129477874	16724991	1	227,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	129484503	129484656	chr7:129484503-129484656	3	+	129484503	129484503	8553170	1	153,	0,
#Partially deleted in new
chr7	129502478	129512932	chr7:129502478-129512932	3	+	129502824	129512441	789624	2	349,686,	0,9768,
#Partially deleted in new
chr7	129502791	129512638	chr7:129502791-129512638	0	+	129502791	129502791	8553170	2	36,388,	0,9459,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	129604547	129611630	chr7:129604547-129611630	3	-	129604547	129604547	8553170	1	7083,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	129611713	129757080	chr7:129611713-129757080	3	+	129657351	129755181	789624	11	111,229,115,127,141,159,198,102,158,125,2063,	0,45632,59715,65918,78692,97361,98660,99761,105505,115527,143304,
#Partially deleted in new
chr7	129611738	129633780	chr7:129611738-129633780	0	+	129611738	129611738	8553170	3	86,91,336,	0,18339,21706,
#Partially deleted in new
chr7	129611755	129756015	chr7:129611755-129756015	1	+	129657351	129755181	789624	11	69,232,115,127,141,159,198,102,158,125,998,	0,45587,59673,65876,78650,97319,98618,99719,105463,115485,143262,
#Partially deleted in new
chr7	129611755	129756015	chr7:129611755-129756015	1	+	129657351	129755181	789624	12	69,232,115,127,141,159,198,102,158,125,57,998,	0,45587,59673,65876,78650,97319,98618,99719,105463,115485,132417,143262,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	129630067	129757082	chr7:129630067-129757082	1	+	129657351	129755181	789624	11	101,232,115,127,141,159,198,102,158,125,2065,	0,27275,41361,47564,60338,79007,80306,81407,87151,97173,124950,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	129630077	129757080	chr7:129630077-129757080	1	+	129657351	129755181	789624	12	91,232,115,127,141,159,198,102,158,125,57,2063,	0,27265,41351,47554,60328,78997,80296,81397,87141,97163,114095,124940,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	129756265	129756377	chr7:129756265-129756377	7	+	129756265	129756265	16724991	1	112,	0,
#Deleted in new
chr7	129770382	129770492	chr7:129770382-129770492	3	-	129770382	129770382	5263520	1	110,	0,
#Deleted in new
chr7	129774691	129774769	chr7:129774691-129774769	3	-	129774691	129774691	789624	1	78,	0,
#Deleted in new
chr7	129774904	129775014	chr7:129774904-129775014	3	-	129774904	129774904	5263520	1	110,	0,
#Partially deleted in new
chr7	129830731	129952949	chr7:129830731-129952949	3	-	129834936	129952555	0	7	4330,129,53,40,75,77,447,	0,8475,26779,28170,48836,50163,121771,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	129830743	129937732	chr7:129830743-129937732	1	-	129834936	129858936	789624	9	4318,129,53,40,75,77,64,22,25,	0,8463,26767,28158,48824,50151,94136,94784,106964,
#Partially deleted in new
chr7	129834936	129952631	chr7:129834936-129952631	1	-	129834936	129952555	0	5	125,129,75,77,129,	0,4270,44631,45958,117566,
#Partially deleted in new
chr7	129834940	129951327	chr7:129834940-129951327	0	-	129834940	129880909	789624	7	121,129,53,40,75,93,50,	0,4266,22570,23961,44627,45938,116337,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	129834977	129839741	chr7:129834977-129839741	0	-	129834977	129834977	8553170	2	84,535,	0,4229,
#Partially deleted in new
chr7	129839203	129952943	chr7:129839203-129952943	0	-	129839203	129952555	789624	6	72,53,40,75,77,441,	0,18307,19698,40364,41691,113299,
#Partially deleted in new
chr7	129839224	129952531	chr7:129839224-129952531	0	-	129865057	129952531	789624	7	111,53,40,51,75,77,29,	0,18286,19677,25790,40343,41670,113278,
#Partially deleted in new
chr7	129856972	129880976	chr7:129856972-129880976	0	-	129856972	129856972	8553170	4	591,40,75,82,	0,1929,22595,23922,
#Deleted in new
chr7	129857078	129858969	chr7:129857078-129858969	0	-	129857078	129857078	8553170	2	485,68,	0,1823,
#Partially deleted in new
chr7	129857547	129952722	chr7:129857547-129952722	0	-	129857547	129949059	789624	6	16,40,75,77,144,220,	0,1354,22020,23347,91411,94955,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	129953233	130026989	chr7:129953233-130026989	3	+	129953233	129953233	8553170	5	247,239,226,58,741,	0,29118,55642,69779,73015,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	129954692	129954794	chr7:129954692-129954794	3	+	129954692	129954692	8553170	1	102,	0,
#Partially deleted in new
chr7	130008853	130026551	chr7:130008853-130026551	0	+	130008853	130008853	8553170	2	248,303,	0,17395,
#Partially deleted in new
chr7	130018285	130051451	chr7:130018285-130051451	3	-	130018663	130051366	789624	10	447,207,213,244,155,128,84,151,112,231,	0,4033,5225,5977,7872,10616,21178,22665,30747,32935,
#Partially deleted in new
chr7	130018286	130051451	chr7:130018286-130051451	1	-	130018663	130051257	789624	11	446,207,213,244,155,128,84,151,112,46,231,	0,4032,5224,5976,7871,10615,21177,22664,30746,32156,32934,
#Partially deleted in new
chr7	130018291	130051374	chr7:130018291-130051374	1	-	130018663	130051366	789624	9	441,207,244,155,128,84,151,112,154,	0,4027,5971,7866,10610,21172,22659,30741,32929,
#Partially deleted in new
chr7	130018292	130051374	chr7:130018292-130051374	0	-	130050472	130051366	789624	11	440,207,213,244,155,128,84,151,112,46,154,	0,4026,5218,5970,7865,10609,21171,22658,30740,32150,32928,
#Partially deleted in new
chr7	130018314	130051374	chr7:130018314-130051374	0	-	130043850	130051366	8553170	12	418,207,213,244,155,128,84,151,45,253,112,154,	0,4004,5196,5948,7843,10587,21149,22636,25072,25313,30718,32906,
#Partially deleted in new
chr7	130018325	130051389	chr7:130018325-130051389	1	-	130018663	130051366	789624	10	407,207,213,115,155,128,84,151,112,169,	0,3993,5185,5937,7832,10576,21138,22625,30707,32895,
#Partially deleted in new
chr7	130023563	130039626	chr7:130023563-130039626	0	-	130023563	130023563	8553170	5	160,244,155,128,163,	0,699,2594,5338,15900,
#Partially deleted in new
chr7	130023676	130051369	chr7:130023676-130051369	0	-	130023676	130023676	8553170	7	47,244,155,128,84,171,149,	0,586,2481,5225,15787,25297,27544,
#Partially deleted in new
chr7	130026235	130051374	chr7:130026235-130051374	0	-	130039543	130051366	789624	5	77,128,317,84,154,	0,2666,10414,13228,24985,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	130027276	130027397	chr7:130027276-130027397	7	+	130027276	130027276	16724991	1	121,	0,
#Partially deleted in new
chr7	130039506	130051377	chr7:130039506-130051377	0	-	130045481	130051366	789624	5	41,151,45,173,157,	0,1444,3880,5809,11714,
#Partially deleted in new
chr7	130039518	130051385	chr7:130039518-130051385	0	-	130043850	130051366	789624	4	29,253,112,165,	0,4109,9514,11702,
#Partially deleted in new
chr7	130070509	130135720	chr7:130070509-130135720	3	+	130070643	130130746	789624	10	300,87,222,155,149,85,67,48,140,5184,	0,26411,45935,50239,51544,53941,55355,56894,58927,60027,
#Partially deleted in new
chr7	130070549	130120769	chr7:130070549-130120769	0	+	130070643	130120769	789624	3	260,222,21,	0,45895,50199,
#Partially deleted in new
chr7	130070771	130124534	chr7:130070771-130124534	0	+	130116620	130124534	789624	7	38,37,87,222,155,149,84,	0,24123,26149,45673,49977,51282,53679,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	130116444	130117666	chr7:130116444-130117666	0	+	130116444	130116444	8553170	2	222,148,	0,1074,
#Deleted in new
chr7	130141730	130142539	chr7:130141730-130142539	3	+	130141730	130141730	8553170	2	42,385,	0,424,
#Deleted in new
chr7	130141737	130142615	chr7:130141737-130142615	0	+	130141737	130141737	789624	2	35,357,	0,521,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	130164714	130205498	chr7:130164714-130205498	3	-	130166450	130205375	789624	15	1791,74,98,115,98,126,97,72,176,202,242,132,59,137,126,	0,5685,8917,9110,10797,13687,16908,19469,20477,27907,37135,37817,39073,39259,40658,
#Partially deleted in new
chr7	130166077	130205348	chr7:130166077-130205348	1	-	130166450	130204110	789624	15	428,74,98,115,98,126,97,72,176,202,242,132,59,137,266,	0,4322,7554,7747,9434,12324,15545,18106,19114,26544,35772,36454,37710,37896,39005,
#Partially deleted in new
chr7	130166077	130205403	chr7:130166077-130205403	1	-	130166450	130205375	789624	14	428,74,98,115,98,97,72,176,202,242,132,59,137,31,	0,4322,7554,7747,9434,15545,18106,19114,26544,35772,36454,37710,37896,39295,
#Partially deleted in new
chr7	130173717	130205361	chr7:130173717-130205361	3	+	130173717	130173717	8553170	5	195,98,59,112,111,	0,7918,18536,26126,31533,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	130175175	130178461	chr7:130175175-130178461	0	-	130175175	130175175	8553170	2	434,60,	0,3226,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	130178458	130182057	chr7:130178458-130182057	0	-	130178458	130178458	8553170	2	69,435,	0,3164,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	130201982	130207770	chr7:130201982-130207770	0	-	130201982	130207768	789624	6	109,132,59,137,102,32,	0,549,1805,1991,4894,5756,
#Partially deleted in new
chr7	130203814	130205382	chr7:130203814-130205382	0	-	130203814	130204110	789624	3	32,137,416,	0,159,1152,
#Partially deleted in new
chr7	130206343	130216844	chr7:130206343-130216844	1	+	130213479	130216470	8553170	3	208,55,871,	0,7136,9630,
#Partially deleted in new
chr7	130207859	130216843	chr7:130207859-130216843	3	+	130207910	130216470	789624	3	234,55,870,	0,5620,8114,
#Partially deleted in new
chr7	130255901	130262770	chr7:130255901-130262770	7	+	130255901	130255901	16724991	2	275,157,	0,6712,
#Partially deleted in new
chr7	130266826	130289798	chr7:130266826-130289798	3	+	130266881	130289747	0	11	126,82,135,96,102,99,111,91,200,85,239,	0,2102,2842,3866,6249,8322,9801,10999,12636,15277,22733,
#Partially deleted in new
chr7	130266864	130273240	chr7:130266864-130273240	0	+	130266864	130266864	8553170	5	88,82,135,96,165,	0,2064,2804,3828,6211,
#Partially deleted in new
chr7	130266866	130277032	chr7:130266866-130277032	0	+	130266866	130266866	8553170	7	86,82,135,96,102,99,405,	0,2062,2802,3826,6209,8282,9761,
#Partially deleted in new
chr7	130266880	130276738	chr7:130266880-130276738	0	+	130266887	130273774	789624	8	72,82,135,96,102,106,99,111,	0,2048,2788,3812,6195,6825,8268,9747,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	130293133	130324180	chr7:130293133-130324180	1	+	130293180	130322676	0	10	115,82,135,102,105,111,91,200,85,1692,	0,5612,6136,11344,12682,13653,15173,17653,18904,29355,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	130293133	130324180	chr7:130293133-130324180	3	+	130293180	130322676	789624	11	115,82,135,99,102,105,111,91,200,85,1692,	0,5612,6136,7682,11344,12682,13653,15173,17653,18904,29355,
#Partially deleted in new
chr7	130293160	130305868	chr7:130293160-130305868	0	+	130293160	130293160	8553170	6	88,82,135,99,89,53,	0,5585,6109,7655,11317,12655,
#Partially deleted in new
chr7	130293160	130306815	chr7:130293160-130306815	0	+	130293180	130306815	789624	6	88,82,135,99,102,29,	0,5585,6109,7655,11317,13626,
#Partially deleted in new
chr7	130293160	130299654	chr7:130293160-130299654	0	+	130293160	130293160	8553170	3	88,82,385,	0,5585,6109,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	130293162	130324180	chr7:130293162-130324180	1	+	130293180	130322676	0	11	86,82,135,99,102,105,111,91,200,85,1692,	0,5583,6107,7653,11315,12653,13624,15144,17624,18875,29326,
#Partially deleted in new
chr7	130293162	130306827	chr7:130293162-130306827	0	+	130293180	130306827	789624	6	86,82,135,102,105,41,	0,5583,6107,11315,12653,13624,
#Partially deleted in new
chr7	130293162	130304643	chr7:130293162-130304643	0	+	130293162	130293162	8553170	5	86,82,135,99,166,	0,5583,6107,7653,11315,
#Partially deleted in new
chr7	130293162	130323121	chr7:130293162-130323121	1	+	130300842	130322676	789624	9	86,99,102,105,111,91,200,85,633,	0,7653,11315,12653,13624,15144,17624,18875,29326,
#Partially deleted in new
chr7	130293278	130304492	chr7:130293278-130304492	0	+	130300842	130304492	789624	5	237,82,135,99,15,	0,5467,5991,7537,11199,
#Partially deleted in new
chr7	130308131	130312122	chr7:130308131-130312122	0	+	130308131	130308131	8553170	3	266,200,85,	0,2655,3906,
#Partially deleted in new
chr7	130344815	130368597	chr7:130344815-130368597	1	+	130346485	130368597	789624	12	390,209,82,135,99,102,102,111,91,200,85,188,	0,1577,2950,5159,14773,16327,17622,18068,18603,22556,23090,23594,
#Partially deleted in new
chr7	130344815	130359625	chr7:130344815-130359625	0	+	130346485	130359625	789624	5	150,188,82,135,37,	0,1598,2950,5159,14773,
#Partially deleted in new
chr7	130344815	130368730	chr7:130344815-130368730	0	+	130344815	130344815	8553170	11	150,188,82,135,99,102,102,111,91,619,321,	0,1598,2950,5159,14773,16327,17622,18068,18603,22556,23594,
#Partially deleted in new
chr7	130344815	130346510	chr7:130344815-130346510	0	+	130346485	130346510	789624	3	390,58,104,	0,1023,1591,
#Partially deleted in new
chr7	130344818	130346581	chr7:130344818-130346581	0	+	130346485	130346581	789624	2	387,175,	0,1588,
#Partially deleted in new
chr7	130344825	130368730	chr7:130344825-130368730	3	+	130346485	130368597	789624	13	505,71,195,82,135,99,102,102,111,91,200,85,321,	0,1013,1581,2940,5149,14763,16317,17612,18058,18593,22546,23080,23584,
#Partially deleted in new
chr7	130344846	130368730	chr7:130344846-130368730	1	+	130346485	130368597	789624	12	1050,195,82,135,99,102,102,111,91,200,85,321,	0,1560,2919,5128,14742,16296,17591,18037,18572,22525,23059,23563,
#Partially deleted in new
chr7	130344853	130368729	chr7:130344853-130368729	1	+	130346485	130368583	789624	11	352,209,82,135,99,102,102,111,91,200,320,	0,1539,2912,5121,14735,16289,17584,18030,18565,22518,23556,
#Partially deleted in new
chr7	130344860	130368730	chr7:130344860-130368730	1	+	130346485	130368597	789624	13	345,58,209,82,135,99,102,102,111,91,200,85,321,	0,978,1532,2905,5114,14728,16282,17577,18023,18558,22511,23045,23549,
#Partially deleted in new
chr7	130346485	130368730	chr7:130346485-130368730	1	+	130346485	130368597	789624	11	116,82,135,99,102,102,111,91,200,85,321,	0,1280,3489,13103,14657,15952,16398,16933,20886,21420,21924,
#Partially deleted in new
chr7	130363440	130368730	chr7:130363440-130368730	0	+	130363440	130368597	789624	2	69,321,	0,4969,
#Partially deleted in new
chr7	130380338	130383482	chr7:130380338-130383482	0	+	130381746	130383482	789624	5	71,82,234,102,92,	0,759,1291,1769,3052,
#Partially deleted in new
chr7	130380370	130388088	chr7:130380370-130388088	3	+	130380520	130388011	0	10	215,82,234,102,102,111,91,200,85,265,	0,727,1259,1737,3020,3313,4165,4775,5468,7453,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	130380493	130384199	chr7:130380493-130384199	0	+	130380493	130380493	8553170	6	92,82,169,102,102,516,	0,604,1201,1614,2897,3190,
#Partially deleted in new
chr7	130380493	130385868	chr7:130380493-130385868	0	+	130380493	130385868	789624	6	92,49,111,91,200,30,	0,604,3190,4042,4652,5345,
#Partially deleted in new
chr7	130380866	130385923	chr7:130380866-130385923	0	+	130381746	130385923	789624	9	55,82,234,102,102,111,91,200,85,	0,231,763,1241,2524,2817,3669,4279,4972,
#Partially deleted in new
chr7	130381092	130388114	chr7:130381092-130388114	1	+	130381746	130388011	789624	9	87,234,102,102,111,91,200,85,291,	0,537,1015,2298,2591,3443,4053,4746,6731,
#Partially deleted in new
chr7	130383698	130385061	chr7:130383698-130385061	0	+	130383698	130383698	8553170	2	96,526,	0,837,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	130383783	130388107	chr7:130383783-130388107	0	+	130383783	130383783	8553170	3	1562,85,284,	0,2055,4040,
#Deleted in new
chr7	130384634	130385979	chr7:130384634-130385979	0	+	130384634	130384634	8553170	2	711,141,	0,1204,
#Partially deleted in new
chr7	130393770	130441237	chr7:130393770-130441237	3	-	130398890	130440966	789624	11	5269,216,115,68,152,145,70,62,48,64,304,	0,6268,6936,8110,8877,10793,17351,18408,23148,34184,47163,
#Partially deleted in new
chr7	130393770	130441210	chr7:130393770-130441210	1	-	130398890	130440966	789624	9	5269,115,68,152,145,70,62,64,277,	0,6936,8110,8877,10793,17351,18408,34184,47163,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	130397507	130401146	chr7:130397507-130401146	0	-	130397507	130397507	8553170	3	1532,216,440,	0,2531,3199,
#Partially deleted in new
chr7	130398728	130441027	chr7:130398728-130441027	0	-	130402767	130440966	789624	11	311,216,115,68,152,69,70,62,48,64,94,	0,1310,1978,3152,3919,5911,12393,13450,18190,29226,42205,
#Partially deleted in new
chr7	130398738	130440995	chr7:130398738-130440995	1	-	130398890	130440966	789624	10	301,115,68,152,145,70,62,48,64,62,	0,1968,3142,3909,5825,12383,13440,18180,29216,42195,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	130398841	130401209	chr7:130398841-130401209	0	-	130398841	130398841	8553170	1	2368,	0,
#Partially deleted in new
chr7	130400267	130402686	chr7:130400267-130402686	0	-	130400267	130400267	8553170	3	554,68,39,	0,1613,2380,
#Partially deleted in new
chr7	130400779	130426730	chr7:130400779-130426730	0	-	130400779	130416958	789624	8	42,68,152,145,70,62,48,102,	0,1101,1868,3784,10342,11399,16139,25849,
#Partially deleted in new
chr7	130401932	130426979	chr7:130401932-130426979	0	-	130401932	130416958	789624	7	16,152,145,70,62,48,334,	0,715,2631,9189,10246,14986,24713,
#Partially deleted in new
chr7	130402668	130442433	chr7:130402668-130442433	0	-	130402668	130442420	789624	7	131,145,70,62,48,64,37,	0,1895,8453,9510,14250,25286,39728,
#Partially deleted in new
chr7	130402694	130417332	chr7:130402694-130417332	0	-	130402694	130416958	789624	6	105,145,70,62,48,131,	0,1869,8427,9484,14224,14507,
#Partially deleted in new
chr7	130404598	130441057	chr7:130404598-130441057	0	-	130426646	130440966	789624	7	110,70,62,48,114,64,124,	0,6523,7580,12320,22047,23356,36335,
#Partially deleted in new
chr7	130410875	130441026	chr7:130410875-130441026	0	-	130410875	130410875	8553170	5	316,62,48,64,93,	0,1303,6043,17079,30058,
#Partially deleted in new
chr7	130411164	130440848	chr7:130411164-130440848	0	-	130411164	130428012	789624	5	27,62,48,64,315,	0,1014,5754,16790,29369,
#Partially deleted in new
chr7	130412018	130426713	chr7:130412018-130426713	0	-	130412018	130412018	8553170	3	222,48,68,	0,4900,14627,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	130419033	130441056	chr7:130419033-130441056	1	-	130421939	130440966	789624	3	2974,64,123,	0,8921,21900,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	130419033	130441210	chr7:130419033-130441210	1	-	130421939	130440966	789624	3	2974,64,277,	0,8921,21900,
#Partially deleted in new
chr7	130421434	130441029	chr7:130421434-130441029	0	-	130421434	130421434	8553170	3	573,64,96,	0,6520,19499,
#Partially deleted in new
chr7	130421852	130441024	chr7:130421852-130441024	0	-	130421852	130421852	8553170	4	155,114,64,91,	0,4793,6102,19081,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	130481490	130484392	chr7:130481490-130484392	3	-	130481490	130481490	8553170	1	2902,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	130486041	130491033	chr7:130486041-130491033	3	-	130486041	130486041	8553170	2	3926,192,	0,4800,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	130486041	130490977	chr7:130486041-130490977	0	-	130486041	130486041	8553170	2	3926,136,	0,4800,
#Partially deleted in new
chr7	130486170	130506292	chr7:130486170-130506292	3	+	130495368	130505056	789624	12	225,155,80,78,137,59,41,71,102,77,64,1354,	0,9197,10985,11765,11968,12248,13704,14291,14618,16473,17762,18768,
#Partially deleted in new
chr7	130486174	130506292	chr7:130486174-130506292	1	+	130495368	130505056	789624	11	221,155,80,78,137,59,41,71,77,64,1354,	0,9193,10981,11761,11964,12244,13700,14287,16469,17758,18764,
#Partially deleted in new
chr7	130486335	130506465	chr7:130486335-130506465	1	+	130495368	130505056	789624	11	184,155,80,78,137,59,41,71,77,64,1527,	0,9032,10820,11600,11803,12083,13539,14126,16308,17597,18603,
#Partially deleted in new
chr7	130486341	130506292	chr7:130486341-130506292	1	+	130495368	130505056	789624	11	54,177,80,78,137,59,41,71,77,64,1354,	0,9004,10814,11594,11797,12077,13533,14120,16302,17591,18597,
#Partially deleted in new
chr7	130486970	130498179	chr7:130486970-130498179	0	+	130495368	130498179	789624	5	36,155,80,78,41,	0,8397,10185,10965,11168,
#Partially deleted in new
chr7	130487125	130498451	chr7:130487125-130498451	0	+	130495368	130498451	789624	6	99,155,80,78,137,33,	0,8242,10030,10810,11013,11293,
#Deleted in new
chr7	130487482	130487622	chr7:130487482-130487622	3	+	130487482	130487482	8553170	1	140,	0,
#Deleted in new
chr7	130488303	130488538	chr7:130488303-130488538	3	+	130488303	130488303	8553170	1	235,	0,
#Deleted in new
chr7	130489867	130489966	chr7:130489867-130489966	3	+	130489867	130489867	8553170	1	99,	0,
#Partially deleted in new
chr7	130491328	130506296	chr7:130491328-130506296	1	+	130495368	130505056	789624	12	158,155,80,78,137,59,41,71,102,77,64,1358,	0,4039,5827,6607,6810,7090,8546,9133,9460,11315,12604,13610,
#Partially deleted in new
chr7	130491332	130500807	chr7:130491332-130500807	0	+	130495368	130500807	789624	9	154,155,80,78,137,59,41,71,19,	0,4035,5823,6603,6806,7086,8542,9129,9456,
#Partially deleted in new
chr7	130492057	130506297	chr7:130492057-130506297	1	+	130492313	130505056	789624	12	282,155,80,78,137,59,41,71,102,77,64,1359,	0,3310,5098,5878,6081,6361,7817,8404,8731,10586,11875,12881,
#Partially deleted in new
chr7	130492112	130506288	chr7:130492112-130506288	1	+	130492313	130505056	789624	12	227,155,80,78,107,59,41,71,102,77,64,1350,	0,3255,5043,5823,6056,6306,7762,8349,8676,10531,11820,12826,
#Partially deleted in new
chr7	130492394	130506253	chr7:130492394-130506253	1	+	130495368	130505056	789624	12	190,155,80,78,137,59,41,71,102,77,64,1315,	0,2973,4761,5541,5744,6024,7480,8067,8394,10249,11538,12544,
#Partially deleted in new
chr7	130492471	130500476	chr7:130492471-130500476	0	+	130495368	130500476	789624	9	113,61,155,80,78,137,59,41,15,	0,731,2896,4684,5464,5667,5947,7403,7990,
#Partially deleted in new
chr7	130494529	130498477	chr7:130494529-130498477	0	+	130495368	130498477	789624	6	22,155,80,78,137,59,	0,838,2626,3406,3609,3889,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	130495793	130498427	chr7:130495793-130498427	3	-	130495793	130495793	8553170	1	2634,	0,
#Deleted in new
chr7	130496110	130496204	chr7:130496110-130496204	3	+	130496110	130496110	789624	1	94,	0,
#Deleted in new
chr7	130497676	130498801	chr7:130497676-130498801	0	+	130497676	130497676	8553170	3	337,137,383,	0,462,742,
#Partially deleted in new
chr7	130498224	130500042	chr7:130498224-130500042	0	+	130498224	130498224	8553170	3	51,59,168,	0,194,1650,
#Partially deleted in new
chr7	130498225	130505298	chr7:130498225-130505298	0	+	130498225	130505056	789624	8	50,59,41,57,56,77,64,360,	0,193,1649,2236,2609,4418,5707,6713,
#Partially deleted in new
chr7	130498379	130501069	chr7:130498379-130501069	0	+	130498379	130498379	8553170	3	98,41,608,	0,1495,2082,
#Partially deleted in new
chr7	130506237	130668748	chr7:130506237-130668748	3	-	130506675	130668668	789624	24	569,99,139,98,172,140,63,126,104,76,244,96,189,68,134,158,87,93,76,80,72,81,53,117,	0,1036,1447,2324,41436,42165,43076,44286,45003,46117,48243,48799,54795,57031,58022,104715,105914,107306,110752,146631,156729,160611,161244,162394,
#Partially deleted in new
chr7	130506523	130564511	chr7:130506523-130564511	0	-	130506523	130506523	8553170	15	283,99,139,91,172,140,63,126,104,76,244,96,189,68,252,	0,750,1161,2045,41150,41879,42790,44000,44717,45831,47957,48513,54509,56745,57736,
#Deleted in new
chr7	130507659	130508282	chr7:130507659-130508282	3	+	130507659	130507659	8553170	1	623,	0,
#Partially deleted in new
chr7	130546786	130668705	chr7:130546786-130668705	1	-	130547641	130668668	789624	20	1059,140,63,126,104,76,244,96,189,68,134,158,87,93,76,80,72,81,53,74,	0,1616,2527,3737,4454,5568,7694,8250,14246,16482,17473,64166,65365,66757,70203,106082,116180,120062,120695,121845,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	130602794	130602913	chr7:130602794-130602913	7	-	130602794	130602794	16724991	1	119,	0,
#Partially deleted in new
chr7	130645224	130645594	chr7:130645224-130645594	7	-	130645224	130645224	16724991	1	370,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	130668647	130687432	chr7:130668647-130687432	3	-	130669013	130685210	789624	9	536,128,143,213,72,79,173,100,602,	0,3013,4086,10507,12298,14946,16540,17796,18183,
#Partially deleted in new
chr7	130668926	130686568	chr7:130668926-130686568	1	-	130669013	130685210	789624	8	257,128,143,213,72,79,173,307,	0,2734,3807,10228,12019,14667,16261,17335,
#Partially deleted in new
chr7	130679312	130686565	chr7:130679312-130686565	0	-	130679312	130685210	789624	6	55,72,79,173,47,122,	0,1633,4281,5875,6949,7131,
#Partially deleted in new
chr7	130680945	130686574	chr7:130680945-130686574	0	-	130680945	130685210	789624	5	72,79,173,112,131,	0,2648,4242,5316,5498,
#Deleted in new
chr7	130731234	130734176	chr7:130731234-130734176	3	-	130733061	130734033	789624	1	2942,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	130790207	130791724	chr7:130790207-130791724	3	+	130790207	130790207	8553170	1	1517,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	130791263	131107928	chr7:130791263-131107928	1	-	130791263	130791263	8553170	7	881,65,80,116,57,131,209,	0,41257,93053,154456,192789,261161,316456,
#Deleted in new
chr7	130822867	130823219	chr7:130822867-130823219	7	-	130822867	130822867	16724991	1	352,	0,
#Deleted in new
chr7	130823204	130823511	chr7:130823204-130823511	7	-	130823204	130823204	16724991	1	307,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	130831072	131110161	chr7:130831072-131110161	1	-	130831072	130831072	8553170	8	1513,180,80,116,57,131,1084,425,	0,41387,53244,114647,152980,221352,276647,278664,
#Partially deleted in new
chr7	130840203	130843725	chr7:130840203-130843725	7	-	130840203	130840203	16724991	5	875,199,271,208,170,	0,1183,2224,2800,3352,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	130853719	130928649	chr7:130853719-130928649	3	+	130853719	130853719	8553170	5	77,79,139,233,1088,	0,8404,61244,62180,73842,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	130862646	131110161	chr7:130862646-131110161	0	-	130862646	130862646	8553170	7	2707,193,180,57,131,1084,425,	0,3846,9813,121406,189778,245073,247090,
#Deleted in new
chr7	130876746	130876810	chr7:130876746-130876810	3	-	130876746	130876746	5263520	1	64,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	130876808	130913310	chr7:130876808-130913310	1	-	130876808	130876808	789624	4	5928,80,43,360,	0,7508,35301,36142,
#Deleted in new
chr7	130877458	130877539	chr7:130877458-130877539	3	-	130877458	130877458	5263520	1	81,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	130881057	131110161	chr7:130881057-131110161	3	-	130881057	130881057	8553170	7	3339,43,116,57,131,1084,425,	0,31052,64662,102995,171367,226662,228679,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	130881669	131110161	chr7:130881669-131110161	1	-	130881669	130881669	8553170	10	1067,80,43,116,21,57,124,131,1084,425,	0,2647,30440,64050,96838,102383,120527,170755,226050,228067,
#Partially deleted in new
chr7	130881761	130913176	chr7:130881761-130913176	0	-	130881761	130881761	8553170	4	377,80,43,226,	0,2555,30348,31189,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	130884108	130913197	chr7:130884108-130913197	2	-	130884108	130884108	8553170	3	288,43,247,	0,28001,28842,
#Deleted in new
chr7	130930208	130932206	chr7:130930208-130932206	3	-	130930208	130930208	8553170	1	1998,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	130936463	130939661	chr7:130936463-130939661	3	+	130936463	130936463	8553170	1	3198,	0,
#Partially deleted in new
chr7	130938962	131107923	chr7:130938962-131107923	3	-	130938962	130938962	8553170	5	2896,116,57,131,204,	0,6757,45090,113462,168757,
#Partially deleted in new
chr7	130941759	131108063	chr7:130941759-131108063	0	-	130941759	130941759	8553170	4	99,116,57,344,	0,3960,42293,165960,
#Partially deleted in new
chr7	130944161	131107030	chr7:130944161-131107030	0	-	130944161	130944161	789624	5	728,116,57,73,288,	0,1558,39891,162383,162581,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	130944166	131110176	chr7:130944166-131110176	0	-	130944166	130944166	789624	6	1669,57,124,131,1084,440,	0,39886,58030,108258,163553,165570,
#Partially deleted in new
chr7	130944167	130984109	chr7:130944167-130984109	0	-	130944167	130944167	8553170	3	280,116,57,	0,1552,39885,
#Partially deleted in new
chr7	130944168	131081013	chr7:130944168-131081013	0	-	130944168	130944168	8553170	4	1667,57,131,148,	0,39884,108256,136697,
#Partially deleted in new
chr7	130944170	131107920	chr7:130944170-131107920	0	-	130944170	130944170	8553170	5	736,116,57,131,201,	0,1549,39882,108254,163549,
#Partially deleted in new
chr7	130944174	131106561	chr7:130944174-131106561	1	-	130944174	130944174	8553170	6	715,116,57,70,131,17,	0,1545,39878,65534,108250,162370,
#Partially deleted in new
chr7	130944189	131107035	chr7:130944189-131107035	0	-	130944189	130944189	8553170	4	1646,57,131,267,	0,39863,108235,162579,
#Partially deleted in new
chr7	130944197	131052493	chr7:130944197-131052493	0	-	130944197	130944197	8553170	4	692,136,57,69,	0,1522,39855,108227,
#Partially deleted in new
chr7	130944292	131108099	chr7:130944292-131108099	1	-	130944292	130944292	8553170	6	1543,21,57,131,73,380,	0,34215,39760,108132,162252,163427,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	130944506	131106398	chr7:130944506-131106398	1	-	130944506	130944506	8553170	7	383,116,57,124,131,63,128,	0,1213,39546,57690,107918,132018,161764,
#Partially deleted in new
chr7	130944578	131107921	chr7:130944578-131107921	0	-	130944578	130944578	8553170	6	311,116,21,57,131,202,	0,1141,33929,39474,107846,163141,
#Partially deleted in new
chr7	130944795	131088474	chr7:130944795-131088474	0	-	130944795	130944795	8553170	5	94,116,57,131,155,	0,924,39257,107629,143524,
#Partially deleted in new
chr7	130945609	131107979	chr7:130945609-131107979	0	-	130945609	130945609	8553170	5	226,129,57,131,260,	0,21779,38443,106815,162110,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	131001707	131107928	chr7:131001707-131107928	0	-	131001707	131001707	8553170	3	613,131,209,	0,50717,106012,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	131042835	131052550	chr7:131042835-131052550	1	-	131042835	131042835	8553170	3	96,165,126,	0,6702,9589,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	131051864	131107928	chr7:131051864-131107928	0	-	131051864	131051864	8553170	2	691,209,	0,55855,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	131054885	131054992	chr7:131054885-131054992	3	-	131054885	131054885	8553170	1	107,	0,
#Partially deleted in new
chr7	131110095	131487844	chr7:131110095-131487844	3	+	131387227	131487728	789624	19	112,122,70,143,89,110,193,78,66,113,213,222,130,148,115,140,103,55,238,	0,32724,265328,277024,278788,287171,289145,301210,304549,318937,327689,333385,335678,353121,354198,356180,360746,368527,377511,
#Partially deleted in new
chr7	131110139	131399384	chr7:131110139-131399384	0	+	131387227	131399384	789624	8	68,122,118,70,143,89,110,144,	0,32680,92717,265284,276980,278744,287127,289101,
#Deleted in new
chr7	131242589	131242995	chr7:131242589-131242995	7	+	131242589	131242589	16724991	1	406,	0,
#Partially deleted in new
chr7	131285061	131399357	chr7:131285061-131399357	1	+	131387227	131399240	789624	6	40,70,143,89,110,120,	0,90362,102058,103822,112205,114176,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	131309468	131327724	chr7:131309468-131327724	3	-	131309468	131309468	8553170	7	1305,94,53,504,123,90,110,	0,1661,12410,13896,14834,17337,18146,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	131309743	131327776	chr7:131309743-131327776	0	-	131309743	131309743	789624	6	1030,94,504,123,130,162,	0,1386,13621,14559,17062,17871,
#Partially deleted in new
chr7	131323593	131327730	chr7:131323593-131327730	0	-	131323593	131323593	8553170	4	275,174,90,116,	0,658,3212,4021,
#Partially deleted in new
chr7	131323631	131327320	chr7:131323631-131327320	0	-	131323631	131323631	8553170	3	237,123,515,	0,671,3174,
#Partially deleted in new
chr7	131323685	131327779	chr7:131323685-131327779	0	-	131323685	131323685	8553170	4	183,123,90,165,	0,617,3120,3929,
#Partially deleted in new
chr7	131323688	131327717	chr7:131323688-131327717	0	-	131323688	131323688	8553170	4	180,174,130,103,	0,563,3117,3926,
#Partially deleted in new
chr7	131323776	131328222	chr7:131323776-131328222	0	-	131323776	131323776	8553170	4	92,123,130,233,	0,526,3029,4213,
#Partially deleted in new
chr7	131327845	131399297	chr7:131327845-131399297	0	+	131387227	131399297	789624	5	152,143,89,110,57,	0,59274,61038,69421,71395,
#Partially deleted in new
chr7	131327855	131414703	chr7:131327855-131414703	0	+	131327855	131327855	8553170	5	142,110,193,78,59,	0,69411,71385,83450,86789,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr7	131327859	131496636	chr7:131327859-131496636	1	+	131327899	131487728	789624	18	138,70,143,89,110,193,78,66,113,213,222,130,148,115,140,103,55,9030,	0,47564,59260,61024,69407,71381,83446,86785,101173,109925,115621,117914,135357,136434,138416,142982,150763,159747,
#Partially deleted in new
chr7	131327882	131478960	chr7:131327882-131478960	0	+	131327882	131327882	8553170	17	115,70,143,89,110,193,78,66,113,213,222,130,148,115,140,103,338,	0,47541,59237,61001,69384,71358,83423,86762,101150,109902,115598,117891,135334,136411,138393,142959,150740,
#Partially deleted in new
chr7	131327896	131487962	chr7:131327896-131487962	0	+	131327899	131399240	789624	18	101,70,143,89,110,196,78,66,113,213,222,130,148,115,140,103,55,356,	0,47527,59223,60987,69370,71341,83409,86748,101136,109888,115584,117877,135320,136397,138379,142945,150726,159710,
#Partially deleted in new
chr7	131463275	131490539	chr7:131463275-131490539	0	+	131463275	131463275	8553170	5	89,115,140,103,2933,	0,1018,3000,7566,24331,
#Partially deleted in new
chr7	131463324	131471178	chr7:131463324-131471178	0	+	131463324	131463324	8553170	4	40,128,140,337,	0,956,2951,7517,
#Deleted in new
chr7	131470837	131472267	chr7:131470837-131472267	0	+	131470837	131470837	8553170	2	107,627,	0,803,
#Partially deleted in new
chr7	131478470	131487962	chr7:131478470-131487962	0	+	131478470	131478470	8553170	2	207,356,	0,9136,
#Deleted in new
chr7	131493963	131497694	chr7:131493963-131497694	3	-	131493963	131493963	8553170	1	3731,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	131500261	131556563	chr7:131500261-131556563	0	-	131509316	131556359	789624	7	4247,168,62,148,635,606,304,	0,5606,5998,6317,8689,10566,55998,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	131503949	131506105	chr7:131503949-131506105	0	-	131503949	131503949	8553170	2	559,238,	0,1918,
#Partially deleted in new
chr7	131504130	131556609	chr7:131504130-131556609	1	-	131504310	131556359	789624	8	378,168,62,148,78,221,606,350,	0,1737,2129,2448,4820,5234,6697,52129,
#Partially deleted in new
chr7	131505875	131506927	chr7:131505875-131506927	0	-	131505875	131505875	8553170	3	160,62,349,	0,384,703,
#Partially deleted in new
chr7	131505888	131509402	chr7:131505888-131509402	0	-	131505888	131505888	8553170	4	147,62,148,452,	0,371,690,3062,
#Partially deleted in new
chr7	131509068	131510898	chr7:131509068-131510898	0	-	131509068	131509068	8553170	2	517,71,	0,1759,
#Partially deleted in new
chr7	131511194	131558217	chr7:131511194-131558217	0	-	131511194	131511194	8553170	3	239,117,174,	0,45930,46849,
#Deleted in new
chr7	131520136	131520503	chr7:131520136-131520503	7	+	131520136	131520136	16724991	1	367,	0,
#Partially deleted in new
chr7	131661951	131662624	chr7:131661951-131662624	7	-	131661951	131661951	16724991	1	673,	0,
#Partially deleted in new
chr7	131665506	131665858	chr7:131665506-131665858	7	+	131665506	131665506	16724991	1	352,	0,
#Deleted in new
chr7	131702268	131702653	chr7:131702268-131702653	7	-	131702268	131702268	16724991	1	385,	0,
#Partially deleted in new
chr7	131753745	131754252	chr7:131753745-131754252	7	-	131753745	131753745	16724991	1	507,	0,
#Partially deleted in new
chr7	131892615	131893615	chr7:131892615-131893615	7	-	131892615	131892615	16724991	2	446,285,	0,715,
#Deleted in new
chr7	131893821	131894074	chr7:131893821-131894074	7	+	131893821	131893821	16724991	1	253,	0,
#Partially deleted in new
chr7	131897640	131933311	chr7:131897640-131933311	1	+	131897640	131897640	8553170	3	85,187,287,	0,34482,35384,
#Deleted in new
chr7	132086265	132087992	chr7:132086265-132087992	7	+	132086265	132086265	16724991	3	114,331,267,	0,607,1460,
#Partially deleted in new
chr7	132123331	132576564	chr7:132123331-132576564	1	-	132130478	132508693	0	32	7243,151,213,170,191,100,104,160,147,67,269,143,235,147,240,94,165,137,118,152,191,97,201,115,100,154,124,101,132,183,1274,143,	0,9717,17267,21787,23178,24568,25211,36141,40810,41802,44972,51446,56355,57254,58049,58765,61967,64139,70730,75153,79314,79991,87611,100195,102829,104119,105014,117734,174759,365960,384174,453090,
#Partially deleted in new
chr7	132123340	132577301	chr7:132123340-132577301	3	-	132130478	132508693	0	32	7234,151,213,170,191,100,104,160,147,67,269,143,235,147,240,94,165,137,118,152,191,97,201,115,100,154,124,101,132,183,1271,880,	0,9708,17258,21778,23169,24559,25202,36132,40801,41793,44963,51437,56346,57245,58040,58756,61958,64130,70721,75144,79305,79982,87602,100186,102820,104110,105005,117725,174750,365951,384165,453081,
#Partially deleted in new
chr7	132140603	132145507	chr7:132140603-132145507	0	-	132140603	132140603	8553170	2	208,389,	0,4515,
#Partially deleted in new
chr7	132264151	132271269	chr7:132264151-132271269	3	+	132264151	132264151	8553170	3	150,107,157,	0,2107,6961,
#Partially deleted in new
chr7	132352333	132367976	chr7:132352333-132367976	3	+	132352333	132352333	8553170	3	48,144,334,	0,13590,15309,
#Partially deleted in new
chr7	132383487	132576470	chr7:132383487-132576470	1	-	132385187	132508693	0	4	1808,183,1274,49,	0,105804,124018,192934,
#Partially deleted in new
chr7	132484757	132648688	chr7:132484757-132648688	1	-	132484815	132508693	0	5	256,183,1274,116,175,	0,4534,22748,161170,163756,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	132648793	132728769	chr7:132648793-132728769	3	+	132648793	132648793	789624	5	250,65,92,256,1335,	0,12687,13197,75983,78641,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	132659530	132672294	chr7:132659530-132672294	0	+	132659530	132659530	8553170	4	85,65,92,359,	0,1950,2460,12405,
#Deleted in new
chr7	132753022	132753126	chr7:132753022-132753126	3	+	132753022	132753022	8553170	1	104,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	132758969	132760632	chr7:132758969-132760632	3	+	132758969	132758969	789624	2	436,315,	0,1348,
#Partially deleted in new
chr7	132784867	133082082	chr7:132784867-133082082	3	-	132785636	133081937	789624	8	793,136,71,84,118,82,88,226,	0,11574,53531,100794,190301,239678,285274,296989,
#Partially deleted in new
chr7	132785392	133082032	chr7:132785392-133082032	1	-	132785636	133081937	789624	9	268,136,71,84,15,118,82,88,176,	0,11049,53006,100269,101581,189776,239153,284749,296464,
#Partially deleted in new
chr7	132785509	133052062	chr7:132785509-133052062	0	-	132785509	132785509	8553170	7	151,136,71,84,118,82,79,	0,10932,52889,100152,189659,239036,266474,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	132785524	133082070	chr7:132785524-133082070	0	-	132815516	133081937	789624	11	136,136,137,154,71,84,118,90,82,88,214,	0,10917,27900,29950,52874,100137,189644,236881,239021,284617,296332,
#Partially deleted in new
chr7	132830692	132849593	chr7:132830692-132849593	3	+	132830692	132830692	8553170	4	73,105,123,498,	0,14346,16586,18403,
#Partially deleted in new
chr7	132972914	133070198	chr7:132972914-133070198	0	-	132973976	133070198	789624	4	1110,118,82,57,	0,2254,51631,97227,
#Deleted in new
chr7	133034606	133035920	chr7:133034606-133035920	7	-	133034606	133034606	16724991	1	1314,	0,
#Deleted in new
chr7	133034859	133034915	chr7:133034859-133034915	3	-	133034859	133034859	5263520	1	56,	0,
#Partially deleted in new
chr7	133035748	133082088	chr7:133035748-133082088	0	-	133035748	133035748	8553170	3	239,88,232,	0,34393,46108,
#Partially deleted in new
chr7	133082828	133082932	chr7:133082828-133082932	3	+	133082828	133082828	8553170	1	104,	0,
#Deleted in new
chr7	133169415	133170514	chr7:133169415-133170514	7	-	133169415	133169415	16724991	1	1099,	0,
#Partially deleted in new
chr7	133253072	134065759	chr7:133253072-134065759	3	+	133253101	134064528	789624	18	115,190,195,185,107,244,175,146,89,97,220,137,156,179,142,179,160,1469,	0,21909,35849,52804,64211,103257,121755,222255,226977,376972,564252,642526,664510,684818,744419,751839,754603,811218,
#Partially deleted in new
chr7	133253072	133484197	chr7:133253072-133484197	1	+	133253101	133484044	789624	10	115,190,195,185,107,244,175,146,89,158,	0,21909,35849,52804,64211,103257,121755,222255,226977,230967,
#Partially deleted in new
chr7	133253072	133630198	chr7:133253072-133630198	0	+	133253072	133253072	8553170	10	115,190,195,185,107,244,175,146,89,154,	0,21909,35849,52804,64211,103257,121755,222255,226977,376972,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	133253094	133481078	chr7:133253094-133481078	0	+	133253094	133253094	8553170	9	93,190,195,185,107,244,175,146,1029,	0,21887,35827,52782,64189,103235,121733,222233,226955,
#Deleted in new
chr7	133253098	133254018	chr7:133253098-133254018	0	+	133253098	133253098	8553170	2	89,479,	0,441,
#Partially deleted in new
chr7	133253364	133305911	chr7:133253364-133305911	0	+	133253364	133253364	8553170	4	129,190,195,35,	0,21617,35557,52512,
#Deleted in new
chr7	133290880	133290988	chr7:133290880-133290988	3	+	133290880	133290880	5263520	1	108,	0,
#Deleted in new
chr7	133315008	133315413	chr7:133315008-133315413	7	-	133315008	133315008	16724991	1	405,	0,
#Partially deleted in new
chr7	133356386	133375028	chr7:133356386-133375028	0	+	133356386	133356386	8553170	2	187,201,	0,18441,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	133396138	133630138	chr7:133396138-133630138	0	+	133396138	133396138	8553170	4	276,146,89,94,	0,79189,83911,233906,
#Partially deleted in new
chr7	133447299	133817465	chr7:133447299-133817465	0	+	133447299	133447299	8553170	5	70,146,89,97,141,	0,28028,32750,182745,370025,
#Deleted in new
chr7	133478914	133480139	chr7:133478914-133480139	0	+	133478914	133478914	8553170	3	126,97,90,	0,391,1135,
#Deleted in new
chr7	133479446	133480139	chr7:133479446-133480139	0	+	133479446	133479446	8553170	2	239,90,	0,603,
#Partially deleted in new
chr7	133551598	133895686	chr7:133551598-133895686	0	+	133551598	133551598	8553170	4	154,97,220,88,	0,78446,265726,344000,
#Partially deleted in new
chr7	133576461	133895736	chr7:133576461-133895736	0	+	133576461	133576461	8553170	4	300,97,220,138,	0,53583,240863,319137,
#Partially deleted in new
chr7	133576631	133895686	chr7:133576631-133895686	0	+	133576631	133576631	8553170	4	173,97,220,88,	0,53413,240693,318967,
#Partially deleted in new
chr7	133576699	133895736	chr7:133576699-133895736	0	+	133576699	133576699	8553170	4	173,97,220,138,	0,53345,240625,318899,
#Partially deleted in new
chr7	133601837	133917717	chr7:133601837-133917717	0	+	133601837	133601837	8553170	5	173,97,220,137,135,	0,28207,215487,293761,315745,
#Deleted in new
chr7	133727367	133727734	chr7:133727367-133727734	7	-	133727367	133727367	16724991	1	367,	0,
#Partially deleted in new
chr7	133732492	133733595	chr7:133732492-133733595	7	-	133732492	133732492	16724991	2	722,60,	0,1043,
#Partially deleted in new
chr7	133768096	133771487	chr7:133768096-133771487	0	+	133768096	133768096	8553170	2	345,181,	0,3210,
#Partially deleted in new
chr7	133930440	133997634	chr7:133930440-133997634	0	+	133930440	133930440	8553170	3	273,179,143,	0,7450,67051,
#Partially deleted in new
chr7	133997574	134007939	chr7:133997574-134007939	0	+	133997574	133997574	8553170	3	59,179,264,	0,7337,10101,
#Partially deleted in new
chr7	133997576	134007868	chr7:133997576-134007868	0	+	133997576	133997576	8553170	3	57,179,193,	0,7335,10099,
#Partially deleted in new
chr7	134009867	134064458	chr7:134009867-134064458	0	+	134009867	134009867	8553170	2	424,168,	0,54423,
#Partially deleted in new
chr7	134009968	134064610	chr7:134009968-134064610	0	+	134009968	134009968	8553170	2	235,320,	0,54322,
#Deleted in new
chr7	134064317	134066589	chr7:134064317-134066589	0	+	134064317	134064317	8553170	3	269,154,330,	0,1479,1942,
#Partially deleted in new
chr7	134127298	134264591	chr7:134127298-134264591	3	+	134127367	134263975	789624	20	366,108,82,101,82,125,144,81,87,107,120,97,114,202,96,140,89,126,149,747,	0,9724,12137,15763,20939,30736,36098,47257,49678,51204,56435,64356,69693,71921,74182,94480,120257,121652,130958,136546,
#Partially deleted in new
chr7	134127298	134210256	chr7:134127298-134210256	1	+	134127367	134210256	789624	16	366,108,82,101,82,125,144,81,87,107,120,97,114,202,96,1550,	0,9724,12137,15763,20939,30736,36098,47257,49678,51204,56435,64356,69693,71921,74182,81408,
#Partially deleted in new
chr7	134127357	134141698	chr7:134127357-134141698	0	+	134127357	134127357	8553170	4	307,108,82,86,	0,9665,12078,14255,
#Partially deleted in new
chr7	134284499	134286055	chr7:134284499-134286055	3	+	134284499	134284499	8553170	2	214,200,	0,1356,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	134289331	134317051	chr7:134289331-134317051	3	-	134294832	134316751	789624	10	5748,76,76,110,61,82,50,103,114,377,	0,7059,10191,10820,12429,12697,15473,17340,20034,27343,
#Partially deleted in new
chr7	134294551	134316903	chr7:134294551-134316903	0	-	134301798	134316751	789624	9	528,76,76,110,61,82,103,114,229,	0,1839,4971,5600,7209,7477,12120,14814,22123,
#Deleted in new
chr7	134294605	134295177	chr7:134294605-134295177	0	-	134294605	134294605	8553170	2	356,98,	0,474,
#Partially deleted in new
chr7	134299308	134316897	chr7:134299308-134316897	1	-	134299499	134316751	789624	8	290,110,61,82,50,103,114,223,	0,843,2452,2720,5496,7363,10057,17366,
#Partially deleted in new
chr7	134346070	134350791	chr7:134346070-134350791	3	-	134346070	134346070	8553170	2	215,112,	0,4609,
#Partially deleted in new
chr7	134442349	134459142	chr7:134442349-134459142	3	-	134442727	134459062	0	10	421,83,84,82,107,123,78,117,168,146,	0,2888,4948,5630,6037,6647,7370,8436,9236,16647,
#Partially deleted in new
chr7	134442385	134459102	chr7:134442385-134459102	0	-	134447928	134459062	789624	10	385,83,84,601,107,123,78,117,168,106,	0,2852,4912,5075,6001,6611,7334,8400,9200,16611,
#Partially deleted in new
chr7	134442386	134459102	chr7:134442386-134459102	0	-	134442386	134442386	789624	9	384,83,764,107,123,78,117,168,106,	0,2851,4911,6000,6610,7333,8399,9199,16610,
#Deleted in new
chr7	134444726	134448024	chr7:134444726-134448024	0	-	134444726	134444726	8553170	3	594,84,45,	0,2571,3253,
#Partially deleted in new
chr7	134447849	134451806	chr7:134447849-134451806	0	-	134447849	134447849	8553170	6	212,107,123,78,117,221,	0,537,1147,1870,2936,3736,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	134447955	134449332	chr7:134447955-134449332	0	-	134447955	134447955	8553170	3	106,107,336,	0,431,1041,
#Partially deleted in new
chr7	134448996	134459192	chr7:134448996-134459192	0	-	134448996	134448996	8553170	5	123,78,117,168,71,	0,723,1789,2589,10125,
#Partially deleted in new
chr7	134449054	134459129	chr7:134449054-134459129	0	-	134449054	134449054	8553170	5	81,78,117,168,133,	0,665,1731,2531,9942,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	134449057	134459284	chr7:134449057-134459284	0	-	134449057	134449057	8553170	4	740,117,168,163,	0,1728,2528,10064,
#Partially deleted in new
chr7	134449095	134459252	chr7:134449095-134459252	0	-	134449095	134449095	8553170	5	40,78,117,168,131,	0,624,1690,2490,10026,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	134449577	134459130	chr7:134449577-134459130	0	-	134449577	134449577	8553170	4	220,117,168,134,	0,1208,2008,9419,
#Partially deleted in new
chr7	134449684	134459284	chr7:134449684-134459284	0	-	134449684	134449684	8553170	4	113,117,168,163,	0,1101,1901,9437,
#Partially deleted in new
chr7	134449718	134459098	chr7:134449718-134459098	0	-	134450882	134459062	789624	4	79,172,168,102,	0,1067,1867,9278,
#Partially deleted in new
chr7	134451293	134459134	chr7:134451293-134459134	0	-	134451293	134451293	8553170	2	460,138,	0,7703,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	134527591	134541408	chr7:134527591-134541408	3	+	134527911	134541089	0	10	386,168,117,78,123,107,82,84,83,362,	0,3051,4316,5412,9058,9459,9988,10602,11343,13455,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	134527619	134537087	chr7:134527619-134537087	0	+	134527619	134527619	8553170	7	358,168,117,78,47,64,37,	0,3023,4288,5384,7997,9089,9431,
#Partially deleted in new
chr7	134537579	134541408	chr7:134537579-134541408	0	+	134537579	134537579	8553170	4	82,84,141,362,	0,614,1355,3467,
#Partially deleted in new
chr7	134537612	134541408	chr7:134537612-134541408	0	+	134537612	134537612	8553170	4	49,133,83,362,	0,532,1322,3434,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	134564787	134570474	chr7:134564787-134570474	0	+	134564787	134564787	8553170	3	759,168,1062,	0,3370,4625,
#Partially deleted in new
chr7	134646807	134679813	chr7:134646807-134679813	3	+	134661507	134679031	0	3	130,662,961,	0,14639,32045,
#Partially deleted in new
chr7	134646810	134679808	chr7:134646810-134679808	1	+	134661507	134679031	0	4	127,125,662,956,	0,324,14636,32042,
#Partially deleted in new
chr7	134646830	134679813	chr7:134646830-134679813	1	+	134661507	134679031	0	4	107,321,662,961,	0,11517,14616,32022,
#Deleted in new
chr7	134660420	134661741	chr7:134660420-134661741	0	+	134661507	134661741	789624	2	340,295,	0,1026,
#Deleted in new
chr7	134734897	134735129	chr7:134734897-134735129	7	-	134734897	134734897	16724991	1	232,	0,
#Partially deleted in new
chr7	134744251	134968402	chr7:134744251-134968402	3	+	134867733	134968345	789624	14	112,88,112,147,403,146,262,141,44,82,138,96,81,63,	0,99632,123441,184502,188736,196840,203256,206122,213817,213957,215722,216281,221054,224088,
#Partially deleted in new
chr7	134745466	134960056	chr7:134745466-134960056	0	+	134867733	134960056	789624	11	106,88,112,147,403,146,262,141,44,82,83,	0,98417,122226,183287,187521,195625,202041,204907,212602,212742,214507,
#Partially deleted in new
chr7	134779419	134968859	chr7:134779419-134968859	1	+	134867733	134968345	789624	15	330,88,112,147,403,78,146,262,141,44,79,138,96,81,520,	0,64464,88273,149334,153568,156268,161672,168088,170954,178649,178792,180554,181113,185886,188920,
#Partially deleted in new
chr7	134779624	134928900	chr7:134779624-134928900	0	+	134867733	134928900	789624	5	125,88,86,112,147,	0,64259,64626,88068,149129,
#Partially deleted in new
chr7	134779633	134868241	chr7:134779633-134868241	0	+	134779633	134779633	8553170	3	116,88,549,	0,64250,88059,
#Partially deleted in new
chr7	134779636	134968653	chr7:134779636-134968653	0	+	134867733	134933256	789624	14	113,88,112,124,197,146,262,141,44,82,138,96,81,314,	0,64247,88056,149117,153557,161455,167871,170737,178432,178572,180337,180896,185669,188703,
#Partially deleted in new
chr7	134779638	134822061	chr7:134779638-134822061	0	+	134779638	134779638	8553170	2	111,77,	0,42346,
#Partially deleted in new
chr7	134779649	134969346	chr7:134779649-134969346	1	+	134867733	134968345	789624	15	100,88,112,147,1090,78,146,262,141,44,82,138,96,81,1007,	0,64234,88043,149104,153338,156038,161442,167858,170724,178419,178559,180324,180883,185656,188690,
#Partially deleted in new
chr7	134779649	134962389	chr7:134779649-134962389	0	+	134779649	134779649	8553170	11	100,88,112,147,403,146,262,141,44,82,2416,	0,64234,88043,149104,153338,161442,167858,170724,178419,178559,180324,
#Partially deleted in new
chr7	134779677	134970641	chr7:134779677-134970641	1	+	134867733	134968345	789624	14	72,88,112,147,403,146,262,141,44,82,138,96,81,2302,	0,64206,88015,149076,153310,161414,167830,170696,178391,178531,180296,180855,185628,188662,
#Partially deleted in new
chr7	134779714	134867975	chr7:134779714-134867975	0	+	134779714	134779714	8553170	4	35,37,88,283,	0,29876,64169,87978,
#Partially deleted in new
chr7	134843883	134933123	chr7:134843883-134933123	0	+	134867733	134933123	789624	5	88,112,42,147,136,	0,23809,84165,84870,89104,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	134843883	134900053	chr7:134843883-134900053	0	+	134843883	134843883	8553170	3	88,112,222,	0,23809,55948,
#Partially deleted in new
chr7	134866840	134928900	chr7:134866840-134928900	0	+	134867733	134928900	789624	3	199,112,147,	0,852,61913,
#Partially deleted in new
chr7	134891399	134970728	chr7:134891399-134970728	1	+	134891620	134968345	789624	13	274,147,403,78,146,262,141,44,82,138,96,81,2389,	0,37354,41588,44288,49692,56108,58974,66669,66809,68574,69133,73906,76940,
#Partially deleted in new
chr7	134891457	134970641	chr7:134891457-134970641	0	+	134891620	134962918	789624	13	216,147,403,146,262,141,44,82,138,96,115,81,2302,	0,37296,41530,49634,56050,58916,66611,66751,68516,69075,71362,73848,76882,
#Partially deleted in new
chr7	134891609	134968859	chr7:134891609-134968859	1	+	134891620	134968345	789624	12	64,147,403,146,262,141,44,82,138,96,81,520,	0,37144,41378,49482,55898,58764,66459,66599,68364,68923,73696,76730,
#Partially deleted in new
chr7	134891609	134968859	chr7:134891609-134968859	1	+	134891620	134968345	789624	13	64,147,403,78,146,262,141,44,79,138,96,81,520,	0,37144,41378,44078,49482,55898,58764,66459,66602,68364,68923,73696,76730,
#Partially deleted in new
chr7	134920565	134933242	chr7:134920565-134933242	0	+	134920565	134920565	8553170	3	155,147,255,	0,8188,12422,
#Partially deleted in new
chr7	134941140	134944551	chr7:134941140-134944551	0	+	134941140	134941140	8553170	2	97,96,	0,3315,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	134941181	134948102	chr7:134941181-134948102	0	+	134941181	134941181	8553170	2	56,595,	0,6326,
#Partially deleted in new
chr7	134950374	134968875	chr7:134950374-134968875	0	+	134950374	134950374	8553170	7	140,44,82,138,96,81,322,	0,7694,7834,9599,10158,14931,18179,
#Partially deleted in new
chr7	134960530	134965437	chr7:134960530-134965437	0	+	134960530	134960530	8553170	2	98,132,	0,4775,
#Partially deleted in new
chr7	134965210	134968723	chr7:134965210-134968723	0	+	134965210	134965210	8553170	2	176,384,	0,3129,
#Partially deleted in new
chr7	134986507	135135778	chr7:134986507-135135778	3	+	134987933	135135261	789624	17	194,122,61,186,108,139,780,163,127,101,113,67,72,58,72,232,938,	0,1367,2742,6985,30544,46336,47641,50910,57517,58966,59291,72661,89889,93695,95211,128872,148333,
#Partially deleted in new
chr7	134986512	135115875	chr7:134986512-135115875	0	+	134987933	135051046	789624	17	189,108,61,186,108,139,780,163,127,101,113,133,67,72,58,72,496,	0,1376,2737,6980,30539,46331,47636,50905,57512,58961,59286,64509,72656,89884,93690,95206,128867,
#Partially deleted in new
chr7	134986512	135147963	chr7:134986512-135147963	1	+	134987933	135147817	789624	16	189,108,61,186,108,139,780,163,127,101,113,67,72,58,72,151,	0,1376,2737,6980,30539,46331,47636,50905,57512,58961,59286,72656,89884,93690,95206,161300,
#Partially deleted in new
chr7	134986529	135017207	chr7:134986529-135017207	0	+	134987933	135017207	789624	4	172,108,61,156,	0,1359,2720,30522,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	134986547	135012511	chr7:134986547-135012511	0	+	134986547	134986547	8553170	5	154,108,61,186,2470,	0,1341,2702,6945,23494,
#Partially deleted in new
chr7	134986554	134995550	chr7:134986554-134995550	0	+	134986554	134986554	8553170	5	147,122,61,186,340,	0,1320,2695,6938,8656,
#Deleted in new
chr7	134986603	134988364	chr7:134986603-134988364	0	+	134986603	134986603	8553170	2	98,476,	0,1285,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	135092362	135170695	chr7:135092362-135170695	0	-	135092362	135092362	8553170	3	2220,312,44,	0,76386,78289,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	135093378	135148163	chr7:135093378-135148163	0	-	135093378	135093378	8553170	2	1204,187,	0,54598,
#Partially deleted in new
chr7	135128443	135129685	chr7:135128443-135129685	7	+	135128443	135128443	16724991	1	1242,	0,
#Partially deleted in new
chr7	135148071	135166215	chr7:135148071-135166215	3	+	135164441	135164999	789624	2	199,1798,	0,16346,
#Partially deleted in new
chr7	135148194	135153133	chr7:135148194-135153133	0	+	135148194	135148194	8553170	2	76,316,	0,4623,
#Deleted in new
chr7	135165781	135170524	chr7:135165781-135170524	1	-	135167771	135168922	789624	4	1090,76,312,249,	0,1950,2967,4494,
#Deleted in new
chr7	135165781	135169474	chr7:135165781-135169474	1	-	135166610	135167779	789624	4	1090,76,130,53,	0,1950,3149,3640,
#Deleted in new
chr7	135165784	135170695	chr7:135165784-135170695	3	-	135166610	135168922	789624	4	1087,76,275,44,	0,1947,3001,4867,
#Deleted in new
chr7	135165784	135170661	chr7:135165784-135170661	1	-	135166610	135167779	789624	4	1087,76,312,263,	0,1947,2964,4614,
#Deleted in new
chr7	135165828	135170795	chr7:135165828-135170795	1	-	135167775	135168922	789624	4	1043,76,316,144,	0,1903,2916,4823,
#Deleted in new
chr7	135166343	135168179	chr7:135166343-135168179	0	-	135166343	135166343	8553170	2	528,448,	0,1388,
#Deleted in new
chr7	135166467	135170675	chr7:135166467-135170675	1	-	135166610	135167779	789624	4	404,76,92,24,	0,1264,2501,4184,
#Deleted in new
chr7	135166574	135169459	chr7:135166574-135169459	0	-	135166574	135166574	8553170	4	297,76,312,38,	0,1157,2174,2847,
#Deleted in new
chr7	135166599	135169474	chr7:135166599-135169474	0	-	135166599	135166599	8553170	4	272,76,130,53,	0,1132,2331,2822,
#Deleted in new
chr7	135167362	135167809	chr7:135167362-135167809	0	-	135167362	135167362	8553170	2	46,78,	0,369,
#Deleted in new
chr7	135168303	135170738	chr7:135168303-135170738	0	-	135168303	135168303	8553170	2	757,87,	0,2348,
#Deleted in new
chr7	135168402	135169547	chr7:135168402-135169547	3	+	135168402	135168402	8553170	1	1145,	0,
#Deleted in new
chr7	135168595	135170511	chr7:135168595-135170511	0	-	135168595	135168595	8553170	2	465,113,	0,1803,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	135183838	135211534	chr7:135183838-135211534	3	-	135186150	135211502	789624	15	2477,198,113,109,169,95,151,194,159,166,131,83,208,180,155,	0,3133,4594,5505,9392,9739,11095,12305,14154,20429,22089,23281,24952,25737,27541,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	135183838	135210899	chr7:135183838-135210899	1	-	135186150	135210850	789624	15	2477,198,113,109,169,95,151,194,159,166,131,83,208,180,67,	0,3133,4594,5505,9392,9739,11095,12305,14154,20429,22089,23281,24952,25737,26994,
#Partially deleted in new
chr7	135185781	135211534	chr7:135185781-135211534	0	-	135185781	135185781	8553170	15	534,198,113,109,169,95,151,194,1108,166,131,83,208,180,155,	0,1190,2651,3562,7449,7796,9152,10362,11262,18486,20146,21338,23009,23794,25598,
#Partially deleted in new
chr7	135188412	135193669	chr7:135188412-135193669	0	-	135188412	135188412	8553170	4	133,109,169,92,	0,931,4818,5165,
#Partially deleted in new
chr7	135188449	135193558	chr7:135188449-135193558	0	-	135188449	135188449	8553170	3	96,109,328,	0,894,4781,
#Deleted in new
chr7	135193214	135193873	chr7:135193214-135193873	0	-	135193214	135193214	8553170	2	185,296,	0,363,
#Partially deleted in new
chr7	135193214	135196317	chr7:135193214-135196317	0	-	135193214	135193214	8553170	4	263,95,151,174,	0,363,1719,2929,
#Partially deleted in new
chr7	135196219	135197269	chr7:135196219-135197269	0	-	135196219	135196219	8553170	2	118,226,	0,824,
#Partially deleted in new
chr7	135196272	135207148	chr7:135196272-135207148	0	-	135196272	135196272	8553170	5	65,159,198,131,29,	0,1720,7995,9655,10847,
#Deleted in new
chr7	135198400	135200305	chr7:135198400-135200305	1	+	135198400	135198400	8553170	2	1315,495,	0,1410,
#Deleted in new
chr7	135199558	135202356	chr7:135199558-135202356	0	+	135199558	135199558	8553170	4	157,135,74,280,	0,252,1915,2518,
#Partially deleted in new
chr7	135199607	135209837	chr7:135199607-135209837	0	+	135199607	135199607	8553170	4	108,135,74,339,	0,203,1866,9891,
#Partially deleted in new
chr7	135199607	135209595	chr7:135199607-135209595	2	+	135199607	135199607	8553170	3	108,135,97,	0,203,9891,
#Deleted in new
chr7	135206993	135207078	chr7:135206993-135207078	3	-	135206993	135206993	5263520	1	85,	0,
#Partially deleted in new
chr7	135231978	135258492	chr7:135231978-135258492	3	+	135231978	135258492	789624	9	60,198,76,85,27,286,74,112,75,	0,8540,10802,11347,13324,14438,19817,23135,26439,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	135246112	135289207	chr7:135246112-135289207	7	-	135246112	135246112	16724991	5	702,84,145,160,98,	0,1021,13649,42125,42997,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	135270016	135310621	chr7:135270016-135310621	5	-	135270016	135270016	16724991	8	78,109,184,112,210,160,157,57,	0,195,554,4024,7183,18221,37137,40548,
#Deleted in new
chr7	135316214	135317752	chr7:135316214-135317752	5	-	135316214	135316214	16724991	2	320,113,	0,1425,
#Partially deleted in new
chr7	135361794	135510080	chr7:135361794-135510080	1	-	135362884	135438331	0	12	1392,213,498,250,58,125,126,102,87,198,266,192,	0,2059,32123,33839,36374,48729,51693,52536,53381,60361,76363,148094,
#Partially deleted in new
chr7	135361794	135510127	chr7:135361794-135510127	1	-	135362884	135438331	0	12	1392,213,498,250,58,134,126,102,87,198,266,239,	0,2059,32123,33839,36374,48720,51693,52536,53381,60361,76363,148094,
#Partially deleted in new
chr7	135361797	135415214	chr7:135361797-135415214	1	-	135362783	135394044	789624	10	1256,33,98,498,250,58,134,126,102,39,	0,1257,1291,32120,33836,36371,48717,51690,52533,53378,
#Partially deleted in new
chr7	135361797	135510077	chr7:135361797-135510077	1	-	135362884	135438331	0	11	1389,498,250,58,134,126,102,87,198,266,189,	0,32120,33836,36371,48717,51690,52533,53378,60358,76360,148091,
#Partially deleted in new
chr7	135362884	135510091	chr7:135362884-135510091	3	-	135362884	135438331	0	11	302,498,250,58,125,126,102,87,198,266,203,	0,31033,32749,35284,47639,50603,51446,52291,59271,75273,147004,
#Partially deleted in new
chr7	135362998	135387887	chr7:135362998-135387887	0	-	135362998	135362998	8553170	3	188,213,306,	0,855,24583,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	135384289	135438331	chr7:135384289-135438331	1	-	135384674	135438331	0	10	442,116,250,58,134,126,102,87,198,174,	0,10010,11344,13879,26225,29198,30041,30886,37866,53868,
#Partially deleted in new
chr7	135386150	135510076	chr7:135386150-135510076	1	-	135388793	135438331	0	11	2744,498,250,58,125,126,102,87,198,266,188,	0,7767,9483,12018,24373,27337,28180,29025,36005,52007,123738,
#Partially deleted in new
chr7	135387069	135510127	chr7:135387069-135510127	1	-	135388793	135438331	0	11	1825,498,250,58,134,126,102,87,198,266,239,	0,6848,8564,11099,23445,26418,27261,28106,35086,51088,122819,
#Partially deleted in new
chr7	135422220	135509693	chr7:135422220-135509693	0	-	135422220	135422220	8553170	3	133,266,139,	0,15937,87334,
#Partially deleted in new
chr7	135422275	135509938	chr7:135422275-135509938	0	-	135422275	135422275	8553170	4	78,266,87,50,	0,15882,86795,87613,
#Partially deleted in new
chr7	135422313	135509717	chr7:135422313-135509717	0	-	135422313	135422313	8553170	4	40,266,87,163,	0,15844,86757,87241,
#Deleted in new
chr7	135444460	135444925	chr7:135444460-135444925	7	+	135444460	135444460	16724991	1	465,	0,
#Partially deleted in new
chr7	135557918	135648757	chr7:135557918-135648757	3	+	135557944	135648556	0	43	54,143,172,145,160,229,165,176,117,138,151,206,183,51,210,100,138,190,121,82,165,125,115,150,72,158,81,192,268,99,149,192,122,139,127,77,129,127,167,124,129,74,354,	0,13186,15735,18351,19050,19877,20832,26913,29656,29936,33531,35068,36628,39449,40079,42951,43451,44886,46421,48226,48832,49328,56240,57997,58736,59171,59683,60493,61504,61871,64858,67245,68321,70054,72425,77662,80012,80638,85273,86976,87549,88239,90485,
#Partially deleted in new
chr7	135557931	135573777	chr7:135557931-135573777	0	+	135557931	135557931	8553170	3	283,143,124,	0,13173,15722,
#Deleted in new
chr7	135597238	135601450	chr7:135597238-135601450	0	+	135597238	135597238	8553170	4	180,210,100,81,	0,759,3631,4131,
#Partially deleted in new
chr7	135597739	135648757	chr7:135597739-135648757	0	+	135597739	135597739	8553170	30	468,100,100,138,190,121,66,165,125,115,150,72,158,81,192,268,99,149,192,122,139,127,77,129,127,167,124,129,74,354,	0,1057,3130,3630,5065,6600,8405,9011,9507,16419,18176,18915,19350,19862,20672,21683,22050,25037,27424,28500,30233,32604,37841,40191,40817,45452,47155,47728,48418,50664,
#Partially deleted in new
chr7	135606148	135615997	chr7:135606148-135615997	0	+	135606148	135615997	789624	5	78,165,125,103,82,	0,602,1098,8022,9767,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	135606870	135616701	chr7:135606870-135616701	0	+	135606870	135613765	789624	6	45,125,88,115,150,47,	0,376,6850,7288,9045,9784,
#Partially deleted in new
chr7	135619813	135648724	chr7:135619813-135648724	0	+	135619813	135635580	789624	13	75,149,192,122,139,127,94,129,127,167,84,74,321,	0,2963,5350,6426,8159,10530,15750,18117,18743,23378,25081,26344,28590,
#Partially deleted in new
chr7	135635314	135648757	chr7:135635314-135648757	0	+	135635314	135635314	8553170	8	343,129,127,167,124,129,74,354,	0,2616,3242,7877,9580,10153,10843,13089,
#Partially deleted in new
chr7	135644898	135648725	chr7:135644898-135648725	0	+	135644898	135645848	789624	4	120,137,74,322,	0,942,1259,3505,
#Partially deleted in new
chr7	135646024	135648749	chr7:135646024-135648749	0	+	135646024	135646024	8553170	2	207,346,	0,2379,
#Deleted in new
chr7	135650971	135651416	chr7:135650971-135651416	7	+	135650971	135650971	16724991	1	445,	0,
#Partially deleted in new
chr7	135660038	135660647	chr7:135660038-135660647	7	+	135660038	135660038	16724991	1	609,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	135662495	135691873	chr7:135662495-135691873	0	+	135662579	135688972	789624	4	99,54,125,303,	0,10257,26408,29075,
#Partially deleted in new
chr7	135662513	135673288	chr7:135662513-135673288	0	+	135662513	135662513	8553170	2	81,536,	0,10239,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	135662520	135676412	chr7:135662520-135676412	3	+	135662579	135674165	789624	3	74,54,2322,	0,10232,11570,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	135662563	135693418	chr7:135662563-135693418	0	+	135662563	135662563	8553170	3	31,125,1848,	0,26340,29007,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	135665598	135665702	chr7:135665598-135665702	3	-	135665598	135665598	8553170	1	104,	0,
#Partially deleted in new
chr7	135681236	135728186	chr7:135681236-135728186	3	-	135681562	135727496	789624	16	464,138,162,125,98,102,102,120,185,81,37,55,173,137,129,789,	0,2887,4285,9964,10311,11086,12900,14131,18127,20443,21608,24359,24891,26877,40158,46161,
#Partially deleted in new
chr7	135681236	135685685	chr7:135681236-135685685	0	-	135681236	135681236	8553170	2	464,164,	0,4285,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	135681240	135728204	chr7:135681240-135728204	0	-	135681240	135681240	8553170	13	460,138,162,125,98,102,102,120,185,4621,137,129,807,	0,2883,4281,9960,10307,11082,12896,14127,18123,20439,26873,40154,46157,
#Partially deleted in new
chr7	135699363	135705807	chr7:135699363-135705807	0	-	135699363	135699363	8553170	4	185,81,40,212,	0,2316,3481,6232,
#Deleted in new
chr7	135704536	135704841	chr7:135704536-135704841	3	+	135704536	135704536	8553170	1	305,	0,
#Partially deleted in new
chr7	135707436	135728174	chr7:135707436-135728174	0	-	135707436	135707436	8553170	3	814,129,777,	0,13958,19961,
#Partially deleted in new
chr7	135708140	135729226	chr7:135708140-135729226	0	-	135708140	135727496	789624	4	110,129,227,112,	0,13254,19257,20974,
#Partially deleted in new
chr7	135721392	135729258	chr7:135721392-135729258	0	-	135721392	135727496	789624	3	131,297,144,	0,6005,7722,
#Partially deleted in new
chr7	135728347	135748813	chr7:135728347-135748813	0	-	135728347	135728347	8553170	3	636,101,309,	0,8751,20157,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	135729598	135748846	chr7:135729598-135748846	3	-	135733974	135748580	789624	4	683,674,101,342,	0,4047,7500,18906,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	135729606	135748619	chr7:135729606-135748619	0	-	135733974	135748580	789624	4	675,643,101,115,	0,4070,7492,18898,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	135733555	135748712	chr7:135733555-135748712	1	-	135733974	135748580	789624	3	764,101,208,	0,3543,14949,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	135926454	135932881	chr7:135926454-135932881	3	+	135926454	135926454	8553170	2	131,673,	0,5754,
#Partially deleted in new
chr7	135926760	135977316	chr7:135926760-135977316	3	-	135929925	135977100	0	4	3252,84,114,288,	0,23838,24756,50268,
#Deleted in new
chr7	135927273	135927450	chr7:135927273-135927450	3	-	135927273	135927450	789624	1	177,	0,
#Partially deleted in new
chr7	135929458	135977353	chr7:135929458-135977353	1	-	135929925	135977100	789624	2	554,325,	0,47570,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	135960702	135960809	chr7:135960702-135960809	3	+	135960702	135960702	8553170	1	107,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	136025760	136084668	chr7:136025760-136084668	3	+	136025760	136025760	8553170	4	28,106,40,281,	0,5167,32705,58627,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	136092956	136437426	chr7:136092956-136437426	3	+	136092956	136092956	8553170	4	80,162,116,375,	0,84295,236025,344095,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	136129979	136130081	chr7:136129979-136130081	3	-	136129979	136129979	8553170	1	102,	0,
#Partially deleted in new
chr7	136262557	136263017	chr7:136262557-136263017	7	-	136262557	136262557	16724991	1	460,	0,
#Partially deleted in new
chr7	136405262	136437382	chr7:136405262-136437382	0	+	136405262	136405262	8553170	2	54,331,	0,31789,
#Partially deleted in new
chr7	136427394	136437410	chr7:136427394-136437410	0	+	136427394	136427394	8553170	2	126,359,	0,9657,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	136485655	136488317	chr7:136485655-136488317	7	+	136485655	136485655	16724991	1	2662,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	136685558	137164273	chr7:136685558-137164273	0	-	136685558	136685558	8553170	5	283,86,193,120,153,	0,2275,100140,347235,478562,
#Deleted in new
chr7	136713870	136715188	chr7:136713870-136715188	7	+	136713870	136713870	16724991	1	1318,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	136743764	137164275	chr7:136743764-137164275	0	-	136743764	136743764	8553170	4	224,59,120,155,	0,288140,289029,420356,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	136784074	137181771	chr7:136784074-137181771	1	-	136784074	136784074	8553170	4	1817,59,120,164,	0,247830,248719,397533,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	136868668	137020255	chr7:136868668-137020255	3	+	137014865	137016266	0	3	324,158,5436,	0,592,146151,
#Deleted in new
chr7	136868777	136869884	chr7:136868777-136869884	0	+	136868777	136868777	8553170	3	215,158,80,	0,483,1027,
#Partially deleted in new
chr7	136869084	137016266	chr7:136869084-137016266	1	+	137014865	137016266	0	3	89,158,1447,	0,176,145735,
#Partially deleted in new
chr7	136869084	137016642	chr7:136869084-137016642	1	+	137014865	137016266	0	3	33,158,1823,	0,176,145735,
#Deleted in new
chr7	136869084	136871963	chr7:136869084-136871963	0	+	136869084	136869084	8553170	3	89,158,2159,	0,176,720,
#Deleted in new
chr7	136869084	136870171	chr7:136869084-136870171	0	+	136869084	136869084	8553170	3	33,158,367,	0,176,720,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	136898772	137164341	chr7:136898772-137164341	1	-	136898772	136898772	789624	4	1045,152,120,221,	0,3077,134021,265348,
#Deleted in new
chr7	136903166	136903294	chr7:136903166-136903294	3	+	136903166	136903166	5263520	1	128,	0,
#Deleted in new
chr7	136938279	136938553	chr7:136938279-136938553	7	-	136938279	136938279	16724991	1	274,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	137119756	137164270	chr7:137119756-137164270	0	-	137119756	137119756	8553170	2	543,150,	0,44364,
#Deleted in new
chr7	137164042	137164612	chr7:137164042-137164612	7	+	137164042	137164042	16724991	1	570,	0,
#Partially deleted in new
chr7	137227340	137343865	chr7:137227340-137343865	3	-	137228019	137254973	0	5	735,162,174,116,427,	0,23889,26123,27518,116098,
#Partially deleted in new
chr7	137227363	137343774	chr7:137227363-137343774	1	-	137236192	137254973	789624	6	712,99,162,174,116,336,	0,8780,23866,26100,27495,116075,
#Deleted in new
chr7	137287686	137287762	chr7:137287686-137287762	3	+	137287686	137287686	8553170	1	76,	0,
#Partially deleted in new
chr7	137318591	137326953	chr7:137318591-137326953	3	+	137318591	137318591	8553170	2	266,1569,	0,6793,
#Deleted in new
chr7	137324742	137325817	chr7:137324742-137325817	0	+	137324742	137324742	8553170	2	55,433,	0,642,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	137344929	137354483	chr7:137344929-137354483	3	-	137344929	137344929	8553170	4	201,98,132,122,	0,5439,7547,9432,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	137348768	137354481	chr7:137348768-137354481	1	-	137348768	137348768	8553170	3	1698,132,207,	0,3708,5506,
#Partially deleted in new
chr7	137388816	137453194	chr7:137388816-137453194	0	-	137388816	137388816	8553170	7	2520,100,37,121,38,26,381,	0,6781,8560,19058,23353,55260,63997,
#Partially deleted in new
chr7	137390523	137847092	chr7:137390523-137847092	1	-	137391219	137846862	789624	34	813,100,37,121,38,26,123,128,41,70,45,80,101,63,200,112,74,63,56,79,138,114,61,83,99,75,117,72,66,57,75,96,109,631,	0,5074,6853,17351,21646,53553,72965,75384,76378,79026,94850,97086,131342,155376,161845,180651,182241,186698,187746,191326,194685,196573,207323,209299,218442,219011,229300,232959,254948,264208,265942,288033,299370,455938,
#Partially deleted in new
chr7	137390523	137847092	chr7:137390523-137847092	1	-	137391219	137846862	789624	33	813,100,37,121,38,26,123,128,11,70,45,80,101,200,112,74,63,56,79,138,114,61,83,99,75,117,72,66,57,75,96,109,631,	0,5074,6853,17351,21646,53553,72965,75384,76378,79026,94850,97086,131342,161845,180651,182241,186698,187746,191326,194685,196573,207323,209299,218442,219011,229300,232959,254948,264208,265942,288033,299370,455938,
#Partially deleted in new
chr7	137391037	137454873	chr7:137391037-137454873	0	-	137391037	137391037	8553170	5	299,100,37,26,120,	0,4560,6339,53039,63716,
#Partially deleted in new
chr7	137391084	137395973	chr7:137391084-137395973	0	-	137391084	137391084	8553170	2	252,376,	0,4513,
#Partially deleted in new
chr7	137391154	137466035	chr7:137391154-137466035	0	-	137391154	137391154	8553170	7	182,100,37,121,38,26,128,	0,4443,6222,16720,21015,52922,74753,
#Partially deleted in new
chr7	137463488	137581928	chr7:137463488-137581928	0	-	137463488	137463488	8553170	12	123,128,41,70,80,101,200,112,74,63,56,79,	0,2419,3413,6061,24121,58377,88880,107686,109276,113733,114781,118361,
#Partially deleted in new
chr7	137513858	137513933	chr7:137513858-137513933	7	+	137513858	137513858	16724991	1	75,	0,
#Partially deleted in new
chr7	137585260	137847092	chr7:137585260-137847092	0	-	137585260	137585260	8553170	4	86,96,109,631,	0,93296,104633,261201,
#Partially deleted in new
chr7	137678606	137774990	chr7:137678606-137774990	0	-	137678606	137678606	8553170	3	46,109,396,	0,11287,95988,
#Deleted in new
chr7	137721984	137722846	chr7:137721984-137722846	7	+	137721984	137721984	16724991	1	862,	0,
#Partially deleted in new
chr7	137771598	137774649	chr7:137771598-137774649	0	-	137771598	137771598	8553170	2	595,55,	0,2996,
#Partially deleted in new
chr7	137874978	138002057	chr7:137874978-138002057	3	-	137880475	138001705	789624	12	5573,217,127,100,69,59,147,185,88,176,217,454,	0,7433,10016,10424,26375,28980,30723,33273,38012,40858,53171,126625,
#Partially deleted in new
chr7	137874980	138001827	chr7:137874980-138001827	1	-	137913073	138001705	789624	13	5571,217,127,100,69,59,147,185,88,75,54,217,224,	0,7431,10014,10422,26373,28978,30721,33271,38010,40856,40978,53169,126623,
#Partially deleted in new
chr7	137878840	138001866	chr7:137878840-138001866	1	-	137879204	138001705	789624	5	375,22,176,217,263,	0,34216,36996,49309,122763,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	137884266	138002067	chr7:137884266-138002067	1	-	137884881	138001705	789624	10	855,100,69,59,147,185,88,176,217,464,	0,1136,17087,19692,21435,23985,28724,31570,43883,117337,
#Partially deleted in new
chr7	137912810	138002047	chr7:137912810-138002047	1	-	137912826	138001705	789624	4	268,176,217,444,	0,3026,15339,88793,
#Partially deleted in new
chr7	137912823	137933890	chr7:137912823-137933890	1	-	137912826	137928279	789624	4	255,176,217,128,	0,3013,15326,20939,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	137912833	137928269	chr7:137912833-137928269	0	-	137912833	137928269	789624	4	245,176,178,120,	0,3003,9756,15316,
#Partially deleted in new
chr7	137953347	137957966	chr7:137953347-137957966	3	+	137953347	137953347	8553170	4	177,89,62,249,	0,1900,3236,4370,
#Deleted in new
chr7	137999658	138002047	chr7:137999658-138002047	0	-	137999658	137999658	8553170	2	152,444,	0,1945,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	138002323	138116866	chr7:138002323-138116866	2	+	138002323	138002323	8553170	10	67,154,67,78,123,110,113,166,83,247,	0,2232,89494,95542,102983,104284,104875,105091,111366,114296,
#Partially deleted in new
chr7	138022457	138024339	chr7:138022457-138024339	7	+	138022457	138022457	16724991	3	361,97,781,	0,672,1101,
#Partially deleted in new
chr7	138046653	138047897	chr7:138046653-138047897	7	+	138046653	138046653	16724991	2	55,644,	0,600,
#Partially deleted in new
chr7	138060055	138060293	chr7:138060055-138060293	7	+	138060055	138060055	16724991	1	238,	0,
#Partially deleted in new
chr7	138076431	138116913	chr7:138076431-138116913	1	+	138076518	138116637	0	8	180,168,117,78,123,110,166,294,	0,12169,15336,21434,28875,30176,30983,40188,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	138076466	138117986	chr7:138076466-138117986	1	+	138076518	138116662	0	8	145,168,117,78,110,166,83,1367,	0,12134,15301,21399,30141,30948,37223,40153,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	138076476	138117986	chr7:138076476-138117986	1	+	138076518	138116662	0	9	135,168,117,78,123,110,166,83,1367,	0,12124,15291,21389,28830,30131,30938,37213,40143,
#Partially deleted in new
chr7	138076517	138097944	chr7:138076517-138097944	0	+	138076518	138097944	789624	3	94,117,79,	0,15250,21348,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	138091253	138091315	chr7:138091253-138091315	3	+	138091253	138091253	8553170	1	62,	0,
#Partially deleted in new
chr7	138091842	138098310	chr7:138091842-138098310	0	+	138091842	138091842	8553170	2	42,445,	0,6023,
#Partially deleted in new
chr7	138122201	138124595	chr7:138122201-138124595	7	+	138122201	138122201	16724991	3	931,577,29,	0,1470,2365,
#Deleted in new
chr7	138123757	138123821	chr7:138123757-138123821	3	+	138123757	138123757	5263520	1	64,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	138163439	138164637	chr7:138163439-138164637	3	+	138163439	138163439	8553170	2	63,394,	0,804,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	138175044	138175136	chr7:138175044-138175136	3	+	138175044	138175044	8553170	1	92,	0,
#Deleted in new
chr7	138187997	138188129	chr7:138187997-138188129	3	-	138187997	138187997	8553170	1	132,	0,
#Partially deleted in new
chr7	138298087	138298484	chr7:138298087-138298484	7	-	138298087	138298087	16724991	1	397,	0,
#Deleted in new
chr7	138404194	138404523	chr7:138404194-138404523	7	-	138404194	138404194	16724991	1	329,	0,
#Partially deleted in new
chr7	138440689	138442238	chr7:138440689-138442238	7	+	138440689	138440689	16724991	1	1549,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr7	138460333	138589993	chr7:138460333-138589993	3	+	138460548	138584951	0	19	579,119,148,133,117,115,147,118,269,174,174,136,73,169,329,133,75,150,5252,	0,43956,54878,58855,64907,68782,78323,90729,94364,107147,110496,113173,116039,117086,118870,120228,121363,123516,124408,
#Partially deleted in new
chr7	138460434	138585585	chr7:138460434-138585585	1	+	138460548	138584951	0	19	478,119,148,133,117,115,147,118,167,174,174,136,73,169,329,133,75,150,844,	0,43855,54777,58754,64806,68681,78222,90628,94263,107046,110395,113072,115938,116985,118769,120127,121262,123415,124307,
#Partially deleted in new
chr7	138461064	138570868	chr7:138461064-138570868	0	+	138461064	138461064	8553170	11	238,119,148,133,117,115,147,118,167,174,39,	0,43225,54147,58124,64176,68051,77592,89998,93633,106416,109765,
#Partially deleted in new
chr7	138490580	138491361	chr7:138490580-138491361	7	-	138490580	138490580	16724991	1	781,	0,
#Partially deleted in new
chr7	138514399	138525314	chr7:138514399-138525314	0	+	138514399	138514399	8553170	4	190,148,133,74,	0,812,4789,10841,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	138514399	138515305	chr7:138514399-138515305	0	+	138514399	138514399	8553170	2	445,94,	0,812,
#Partially deleted in new
chr7	138554769	138573642	chr7:138554769-138573642	0	+	138554769	138554769	8553170	5	197,130,174,174,136,	0,1499,12711,16060,18737,
#Partially deleted in new
chr7	138594284	138663152	chr7:138594284-138663152	1	-	138594609	138663087	789624	11	337,114,90,82,112,206,74,129,126,64,79,	0,2132,26761,31684,33065,33873,35764,50432,54727,62163,68789,
#Partially deleted in new
chr7	138594284	138701352	chr7:138594284-138701352	1	-	138594609	138679045	789624	12	337,114,90,82,112,206,74,129,126,92,116,175,	0,2132,26761,31684,33065,33873,35764,50432,54727,84149,84679,106893,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	138594284	138663571	chr7:138594284-138663571	0	-	138597159	138644764	789624	11	337,833,90,82,112,206,74,129,126,64,3708,	0,2132,26761,31684,33065,33873,35764,50432,54727,62163,65579,
#Partially deleted in new
chr7	138594285	138664224	chr7:138594285-138664224	1	-	138594609	138663087	789624	12	336,114,90,82,112,206,74,129,126,64,72,15,	0,2131,26760,31683,33064,33872,35763,50431,54726,62162,68788,69924,
#Partially deleted in new
chr7	138594286	138626094	chr7:138594286-138626094	0	-	138594286	138594286	8553170	4	335,114,90,126,	0,2130,26759,31682,
#Partially deleted in new
chr7	138594436	138627444	chr7:138594436-138627444	0	-	138594436	138594436	8553170	4	185,114,82,95,	0,1980,31532,32913,
#Partially deleted in new
chr7	138594599	138679079	chr7:138594599-138679079	3	-	138594609	138679045	789624	15	22,114,90,82,112,206,74,129,126,64,125,72,99,92,116,	0,1817,26446,31369,32750,33558,35449,50117,54412,61848,65264,68474,77419,83834,84364,
#Deleted in new
chr7	138625059	138625179	chr7:138625059-138625179	3	-	138625059	138625059	8553170	1	120,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	138645670	138646448	chr7:138645670-138646448	7	-	138645670	138645670	16724991	2	76,346,	0,432,
#Partially deleted in new
chr7	138688979	138689522	chr7:138688979-138689522	7	+	138688979	138688979	16724991	1	543,	0,
#Partially deleted in new
chr7	138701606	138703062	chr7:138701606-138703062	7	+	138701606	138701606	16724991	2	592,130,	0,1326,
#Partially deleted in new
chr7	138706293	138798196	chr7:138706293-138798196	3	-	138706623	138771247	789624	22	424,172,118,129,102,217,119,94,158,140,151,213,94,83,127,95,126,95,79,134,103,163,	0,3330,9470,15603,22467,26583,27842,33246,38829,41131,42873,46331,49395,50164,53458,56046,56606,62486,62879,64837,79864,91740,
#Partially deleted in new
chr7	138706294	138774037	chr7:138706294-138774037	1	-	138706623	138771247	789624	21	423,172,118,129,102,217,119,94,158,140,151,213,94,83,127,95,126,95,79,134,221,	0,3329,9469,15602,22466,26582,27841,33245,38828,41130,42872,46330,49394,50163,53457,56045,56605,62485,62878,64836,67522,
#Partially deleted in new
chr7	138706309	138755901	chr7:138706309-138755901	1	-	138706623	138755730	789624	13	408,172,118,129,102,217,119,94,158,140,151,213,213,	0,3314,9454,15587,22451,26567,27826,33230,38813,41115,42857,46315,49379,
#Partially deleted in new
chr7	138706326	138755991	chr7:138706326-138755991	1	-	138706711	138755730	789624	11	391,129,102,217,119,94,158,140,151,213,303,	0,15570,22434,26550,27809,33213,38796,41098,42840,46298,49362,
#Partially deleted in new
chr7	138706338	138749239	chr7:138706338-138749239	0	-	138709765	138749239	789624	10	379,172,129,102,217,119,94,158,140,73,	0,3285,15558,22422,26538,27797,33201,38784,41086,42828,
#Partially deleted in new
chr7	138706525	138798104	chr7:138706525-138798104	1	-	138706623	138771247	789624	21	192,172,118,129,102,217,119,94,158,140,151,213,94,83,127,95,126,95,79,134,71,	0,3098,9238,15371,22235,26351,27610,33014,38597,40899,42641,46099,49163,49932,53226,55814,56374,62254,62647,64605,91508,
#Partially deleted in new
chr7	138734187	138747675	chr7:138734187-138747675	0	-	138734187	138734187	8553170	2	67,251,	0,13237,
#Partially deleted in new
chr7	138759875	138774048	chr7:138759875-138774048	0	-	138759875	138771247	789624	7	3,95,126,95,79,134,232,	0,2464,3024,8904,9297,11255,13941,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	138786243	138799560	chr7:138786243-138799560	0	-	138786243	138786243	8553170	3	17,264,246,	0,11790,13071,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	138797951	138803748	chr7:138797951-138803748	1	+	138798104	138803069	789624	3	235,69,849,	0,3378,4948,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	138797951	138806759	chr7:138797951-138806759	3	+	138798104	138803069	789624	3	235,72,3860,	0,3375,4948,
#Partially deleted in new
chr7	138798006	138803291	chr7:138798006-138803291	1	+	138798104	138803069	789624	2	180,392,	0,4893,
#Partially deleted in new
chr7	138798011	138838101	chr7:138798011-138838101	1	+	138798104	138838032	789624	3	175,72,233,	0,3315,39857,
#Partially deleted in new
chr7	138798028	138801811	chr7:138798028-138801811	0	+	138798028	138798028	8553170	2	158,485,	0,3298,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr7	138831380	138981318	chr7:138831380-138981318	3	-	138837905	138981269	789624	20	6732,146,158,47,318,154,224,206,116,197,185,178,149,60,184,131,178,89,2691,236,	0,8752,12936,20842,29758,36594,38157,39776,48157,50007,62961,67574,72207,73641,75538,77610,79765,80991,85367,149702,
#Partially deleted in new
chr7	138837524	138981318	chr7:138837524-138981318	1	-	138837905	138981269	789624	20	636,146,158,47,318,154,224,206,116,197,185,178,149,60,184,131,178,89,2691,236,	0,2608,6792,14698,23614,30450,32013,33632,42013,43863,56817,61430,66063,67497,69394,71466,73621,74847,79223,143558,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	138876358	138876465	chr7:138876358-138876465	3	-	138876358	138876358	8553170	1	107,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	139025705	139036029	chr7:139025705-139036029	3	-	139026543	139036017	789624	5	855,126,259,136,377,	0,1002,2996,8837,9947,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	139043519	139109648	chr7:139043519-139109648	3	-	139047593	139109331	0	13	4334,131,131,91,103,121,175,124,102,774,253,136,625,	0,9931,10445,11685,17516,21359,30336,32766,35032,35950,40260,46104,65504,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	139045915	139109354	chr7:139045915-139109354	1	-	139047593	139109331	789624	13	1938,131,131,91,103,121,175,124,102,1140,253,136,331,	0,7535,8049,9289,15120,18963,27940,30370,32636,33188,37864,43708,63108,
#Deleted in new
chr7	139049455	139050006	chr7:139049455-139050006	7	-	139049455	139049455	16724991	1	551,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	139060337	139079267	chr7:139060337-139079267	0	-	139061031	139079267	789624	6	801,121,175,124,102,164,	0,4541,13518,15948,18214,18766,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	139060337	139109719	chr7:139060337-139109719	1	-	139061031	139109331	0	9	801,121,175,124,102,774,253,136,696,	0,4541,13518,15948,18214,19132,23442,29286,48686,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr7	139133743	139191985	chr7:139133743-139191985	1	+	139133857	139189365	789624	17	117,138,93,115,50,146,172,75,103,56,54,64,89,84,70,107,2665,	0,911,4103,6146,8512,13401,14462,27204,31388,33096,34600,35545,44470,44771,45830,47348,55577,
#Partially deleted in new
chr7	139133763	139189665	chr7:139133763-139189665	1	+	139133857	139189432	789624	15	97,138,93,115,50,103,56,54,64,89,84,70,107,134,345,	0,891,4083,6126,8492,31368,33076,34580,35525,44450,44751,45810,47328,53642,55557,
#Partially deleted in new
chr7	139133775	139147154	chr7:139133775-139147154	0	+	139133775	139133775	8553170	6	85,67,93,115,50,171,	0,879,4071,6114,8480,13208,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr7	139133777	139191986	chr7:139133777-139191986	3	+	139133857	139189432	789624	18	83,138,93,115,50,146,172,75,103,56,54,64,89,84,70,107,134,2666,	0,877,4069,6112,8478,13367,14428,27170,31354,33062,34566,35511,44436,44737,45796,47314,53628,55543,
#Partially deleted in new
chr7	139133777	139161343	chr7:139133777-139161343	1	+	139133857	139161046	789624	8	83,138,93,115,50,146,172,396,	0,877,4069,6112,8478,13367,14428,27170,
#Partially deleted in new
chr7	139133777	139189802	chr7:139133777-139189802	1	+	139133857	139189432	789624	16	83,138,93,115,50,75,103,53,54,64,89,84,70,107,134,482,	0,877,4069,6112,8478,27170,31354,33065,34566,35511,44436,44737,45796,47314,53628,55543,
#Partially deleted in new
chr7	139133779	139168581	chr7:139133779-139168581	0	+	139133779	139133779	8553170	11	81,138,93,115,50,146,172,75,103,56,238,	0,875,4067,6110,8476,13365,14426,27168,31352,33060,34564,
#Partially deleted in new
chr7	139133782	139189800	chr7:139133782-139189800	1	+	139133857	139189432	789624	17	78,138,115,50,146,172,75,103,56,54,64,89,84,70,107,134,480,	0,872,6107,8473,13362,14423,27165,31349,33057,34561,35506,44431,44732,45791,47309,53623,55538,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr7	139133787	139190292	chr7:139133787-139190292	0	+	139133857	139146992	789624	18	73,138,93,115,50,307,172,75,103,56,54,64,89,84,70,107,134,972,	0,867,4059,6102,8468,13196,14418,27160,31344,33052,34556,35501,44426,44727,45786,47304,53618,55533,
#Partially deleted in new
chr7	139133821	139148248	chr7:139133821-139148248	0	+	139133821	139133821	8553170	7	39,67,93,115,50,146,43,	0,833,4025,6068,8434,13323,14384,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	139172515	139174266	chr7:139172515-139174266	7	-	139172515	139172515	16724991	1	1751,	0,
#Deleted in new
chr7	139198556	139199142	chr7:139198556-139199142	7	-	139198556	139198556	16724991	1	586,	0,
#Partially deleted in new
chr7	139227536	139227828	chr7:139227536-139227828	7	-	139227536	139227536	16724991	2	81,194,	0,98,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	139228220	139228605	chr7:139228220-139228605	7	+	139228220	139228220	16724991	2	79,169,	0,216,
#Partially deleted in new
chr7	139230355	139261290	chr7:139230355-139261290	0	+	139237067	139261290	789624	6	113,93,102,138,104,39,	0,6649,21600,28132,28911,30896,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr7	139231484	139308236	chr7:139231484-139308236	3	+	139231484	139297836	789624	18	468,93,102,138,104,490,71,130,119,114,144,51,43,51,1551,232,93,10450,	0,5520,20471,27003,27782,29767,34848,37909,40837,41812,42446,44612,47833,50520,51539,61747,62404,66302,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	139258518	139277714	chr7:139258518-139277714	0	+	139258518	139276151	789624	9	107,104,490,71,130,119,114,144,1618,	0,748,2733,7814,10875,13803,14778,15412,17578,
#Partially deleted in new
chr7	139293626	139301994	chr7:139293626-139301994	0	+	139293626	139293626	8553170	2	355,4208,	0,4160,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	139315290	139315394	chr7:139315290-139315394	3	-	139315290	139315290	8553170	1	104,	0,
#Partially deleted in new
chr7	139339456	139345795	chr7:139339456-139345795	0	+	139339456	139339456	8553170	2	50,295,	0,6044,
#Partially deleted in new
chr7	139340358	139422511	chr7:139340358-139422511	1	+	139371411	139422340	789624	11	159,77,95,99,111,144,177,92,30,192,349,	0,31028,35703,58240,61778,65285,66815,69204,72192,77179,81804,
#Partially deleted in new
chr7	139340449	139345790	chr7:139340449-139345790	0	+	139340449	139340449	789624	2	170,290,	0,5051,
#Partially deleted in new
chr7	139340490	139345777	chr7:139340490-139345777	0	+	139340490	139340490	8553170	2	109,277,	0,5010,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	139341131	139346319	chr7:139341131-139346319	3	+	139341384	139345704	789624	2	391,819,	0,4369,
#Partially deleted in new
chr7	139341359	139422599	chr7:139341359-139422599	3	+	139341384	139422340	789624	11	163,121,95,99,111,144,177,92,30,192,437,	0,4141,34702,57239,60777,64284,65814,68203,71191,76178,80803,
#Deleted in new
chr7	139359031	139359566	chr7:139359031-139359566	3	-	139359031	139359031	8553170	1	535,	0,
#Partially deleted in new
chr7	139359511	139398624	chr7:139359511-139398624	0	+	139360261	139375541	789624	6	166,118,71,75,95,26,	0,693,14889,15997,16550,39087,
#Partially deleted in new
chr7	139359845	139423457	chr7:139359845-139423457	1	+	139374413	139422340	789624	11	477,71,95,99,111,144,177,92,30,192,1295,	0,14555,16216,38753,42291,45798,47328,49717,52705,57692,62317,
#Partially deleted in new
chr7	139359907	139423452	chr7:139359907-139423452	3	+	139360261	139422340	789624	10	415,95,99,111,144,177,92,30,192,1290,	0,16154,38691,42229,45736,47266,49655,52643,57630,62255,
#Partially deleted in new
chr7	139359907	139374555	chr7:139359907-139374555	0	+	139359907	139359907	8553170	2	415,155,	0,14493,
#Partially deleted in new
chr7	139359911	139423151	chr7:139359911-139423151	0	+	139360261	139398623	789624	11	411,71,95,99,111,144,177,92,30,192,989,	0,14489,16150,38687,42225,45732,47262,49651,52639,57626,62251,
#Partially deleted in new
chr7	139371411	139423457	chr7:139371411-139423457	1	+	139371411	139422340	789624	10	52,95,99,111,144,177,92,30,192,1295,	0,4650,27187,30725,34232,35762,38151,41139,46126,50751,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	139374672	139412825	chr7:139374672-139412825	0	+	139374672	139374672	8553170	7	1484,99,111,144,177,92,275,	0,23926,27464,30971,32501,34890,37878,
#Partially deleted in new
chr7	139375203	139423201	chr7:139375203-139423201	0	+	139375203	139375203	8553170	9	953,99,111,144,177,92,30,192,1039,	0,23395,26933,30440,31970,34359,37347,42334,46959,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	139416124	139423156	chr7:139416124-139423156	0	+	139416124	139416124	8553170	2	1605,994,	0,6038,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	139448739	139448843	chr7:139448739-139448843	3	+	139448739	139448739	8553170	1	104,	0,
#Partially deleted in new
chr7	139452689	139483712	chr7:139452689-139483712	3	-	139453586	139483642	789624	5	1018,104,146,102,827,	0,1421,26937,27456,30196,
#Partially deleted in new
chr7	139453337	139483663	chr7:139453337-139483663	1	-	139453519	139483642	789624	2	370,778,	0,29548,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	139502452	139503812	chr7:139502452-139503812	7	+	139502452	139502452	16724991	1	1360,	0,
#Partially deleted in new
chr7	139523855	139544984	chr7:139523855-139544984	3	+	139523927	139544342	789624	5	262,75,167,101,754,	0,12418,16465,18165,20375,
#Partially deleted in new
chr7	139524081	139544250	chr7:139524081-139544250	0	+	139524081	139544250	789624	4	36,167,101,20,	0,16239,17939,20149,
#Deleted in new
chr7	139534239	139534549	chr7:139534239-139534549	7	+	139534239	139534239	16724991	1	310,	0,
#Partially deleted in new
chr7	139539152	139544984	chr7:139539152-139544984	0	+	139539152	139539152	8553170	3	1335,101,754,	0,2868,5078,
#Partially deleted in new
chr7	139561569	139777718	chr7:139561569-139777718	3	-	139572926	139777623	789624	15	11828,161,248,282,180,143,122,208,163,185,87,120,124,1084,114,	0,13558,22247,35147,38847,42511,51632,52716,58831,65031,67383,69595,70032,154362,216035,
#Partially deleted in new
chr7	139572628	139777778	chr7:139572628-139777778	1	-	139572926	139777623	789624	15	769,161,248,282,180,143,122,127,163,185,87,120,124,1084,174,	0,2499,11188,24088,27788,31452,40573,41657,47772,53972,56324,58536,58973,143303,204976,
#Partially deleted in new
chr7	139583523	139717013	chr7:139583523-139717013	1	-	139583724	139717013	789624	11	541,162,143,122,208,163,185,87,120,124,1082,	0,16911,20557,29678,30762,36877,43077,45429,47641,48078,132408,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	139777050	139789622	chr7:139777050-139789622	0	+	139777050	139777050	8553170	4	191,64,89,359,	0,5615,10287,12213,
#Partially deleted in new
chr7	139777146	139797484	chr7:139777146-139797484	0	+	139777146	139777146	8553170	3	95,89,275,	0,10191,20063,
#Partially deleted in new
chr7	139778135	139782729	chr7:139778135-139782729	0	+	139778135	139778135	8553170	4	15,85,77,64,	0,2604,4352,4530,
#Partially deleted in new
chr7	139778247	140020323	chr7:139778247-140020323	1	+	139829387	140020099	789624	18	224,85,64,89,168,94,53,97,117,138,89,149,131,315,92,138,163,299,	0,2492,4418,9090,51064,93987,97337,132977,157943,174303,175120,177211,179386,183671,228843,237475,239423,241777,
#Partially deleted in new
chr7	139778247	140020289	chr7:139778247-140020289	1	+	139875602	140020099	789624	15	224,64,89,94,53,97,117,89,149,131,315,92,138,163,265,	0,4418,9090,93987,97337,132977,157943,175120,177211,179386,183671,228843,237475,239423,241777,
#Partially deleted in new
chr7	139778253	139797484	chr7:139778253-139797484	0	+	139778253	139778253	8553170	3	218,89,275,	0,9084,18956,
#Partially deleted in new
chr7	139778255	139797483	chr7:139778255-139797483	0	+	139778255	139778255	8553170	5	216,85,64,89,274,	0,2484,4410,9082,18954,
#Partially deleted in new
chr7	139778337	139936307	chr7:139778337-139936307	0	+	139829387	139936307	789624	7	134,89,168,94,53,97,117,	0,9000,50974,93897,97247,132887,157853,
#Partially deleted in new
chr7	139778399	140020293	chr7:139778399-140020293	3	+	139829387	140020099	789624	17	72,85,64,89,168,94,53,97,117,89,149,131,315,92,138,163,269,	0,2340,4266,8938,50912,93835,97185,132825,157791,174968,177059,179234,183519,228691,237323,239271,241625,
#Partially deleted in new
chr7	139829223	140020293	chr7:139829223-140020293	1	+	139829387	140020099	789624	13	256,94,53,97,117,89,149,131,315,92,138,163,269,	0,43011,46361,82001,106967,124144,126235,128410,132695,177867,186499,188447,190801,
#Partially deleted in new
chr7	139829246	140020291	chr7:139829246-140020291	0	+	139829387	139875641	789624	13	233,94,82,97,117,89,149,131,315,92,138,163,267,	0,42988,46338,81978,106944,124121,126212,128387,132672,177844,186476,188424,190778,
#Partially deleted in new
chr7	139829248	139875892	chr7:139829248-139875892	0	+	139829248	139829248	8553170	3	231,94,308,	0,42986,46336,
#Partially deleted in new
chr7	139829253	139914029	chr7:139829253-139914029	1	+	139829387	139913187	789624	5	226,94,53,97,965,	0,42981,46331,81971,83811,
#Partially deleted in new
chr7	139829253	140020279	chr7:139829253-140020279	1	+	139829387	140020099	789624	14	226,94,53,97,117,138,89,149,131,315,92,138,163,255,	0,42981,46331,81971,106937,123297,124114,126205,128380,132665,177837,186469,188417,190771,
#Partially deleted in new
chr7	139829263	140020325	chr7:139829263-140020325	1	+	139829387	140020040	789624	12	216,94,53,97,117,89,149,131,315,92,138,301,	0,42971,46321,81961,106927,124104,126195,128370,132655,177827,186459,190761,
#Partially deleted in new
chr7	139829270	139953517	chr7:139829270-139953517	0	+	139829270	139829270	8553170	5	209,94,53,117,150,	0,42964,46314,106920,124097,
#Partially deleted in new
chr7	139829272	140016829	chr7:139829272-140016829	0	+	139829272	139829272	8553170	10	207,97,117,89,149,131,315,92,138,438,	0,81952,106918,124095,126186,128361,132646,177818,186450,187119,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	139829301	139936235	chr7:139829301-139936235	0	+	139829387	139906107	789624	6	178,94,53,98,97,45,	0,42933,46283,76799,81923,106889,
#Partially deleted in new
chr7	139953434	139963051	chr7:139953434-139963051	0	+	139953434	139953434	8553170	4	22,149,131,1133,	0,2024,4199,8484,
#Partially deleted in new
chr7	139957580	139962236	chr7:139957580-139962236	0	+	139957580	139957580	8553170	2	184,318,	0,4338,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	140023743	140063721	chr7:140023743-140063721	3	-	140024559	140062847	0	12	1142,152,131,76,97,142,196,124,102,298,136,1200,	0,2453,3532,4869,10491,13971,17900,23140,30918,33112,34155,38778,
#Partially deleted in new
chr7	140023748	140062933	chr7:140023748-140062933	0	-	140034250	140062847	789624	11	1137,152,131,76,97,196,124,102,298,136,412,	0,2448,3527,4864,10486,17895,23135,30913,33107,34150,38773,
#Partially deleted in new
chr7	140023785	140057309	chr7:140023785-140057309	0	-	140023785	140023785	8553170	10	1100,152,131,76,97,142,196,124,102,454,	0,2411,3490,4827,10449,13929,17858,23098,30876,33070,
#Partially deleted in new
chr7	140024533	140056991	chr7:140024533-140056991	0	-	140026237	140056991	789624	6	352,152,76,97,102,136,	0,1663,4079,9701,30128,32322,
#Partially deleted in new
chr7	140024580	140054763	chr7:140024580-140054763	0	-	140037821	140054763	789624	6	305,152,76,97,142,102,	0,1616,4032,9654,13134,30081,
#Deleted in new
chr7	140025242	140027318	chr7:140025242-140027318	0	-	140025547	140027318	789624	3	340,152,43,	0,954,2033,
#Partially deleted in new
chr7	140026195	140029142	chr7:140026195-140029142	0	-	140026195	140026195	8553170	3	153,131,530,	0,1080,2417,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	140026203	140027667	chr7:140026203-140027667	0	-	140026203	140026203	8553170	2	145,392,	0,1072,
#Partially deleted in new
chr7	140027275	140034736	chr7:140027275-140034736	0	-	140027275	140027275	8553170	3	131,76,502,	0,1337,6959,
#Partially deleted in new
chr7	140033841	140041728	chr7:140033841-140041728	0	-	140033841	140033841	8553170	4	240,97,142,85,	0,393,3873,7802,
#Partially deleted in new
chr7	140041378	140054722	chr7:140041378-140054722	0	-	140041378	140041378	8553170	3	461,124,61,	0,5505,13283,
#Partially deleted in new
chr7	140057406	140062551	chr7:140057406-140062551	0	-	140057406	140057406	8553170	3	367,136,30,	0,492,5115,
#Partially deleted in new
chr7	140084745	140177035	chr7:140084745-140177035	3	-	140091093	140176937	0	20	6443,274,83,209,149,98,155,125,210,90,92,107,88,163,187,142,161,118,86,292,	0,7058,9310,11809,12153,12799,14133,15153,17205,26349,28745,34367,35696,39875,41891,42696,44747,48793,54359,91998,
#Deleted in new
chr7	140090902	140092141	chr7:140090902-140092141	0	-	140090902	140090902	8553170	2	286,338,	0,901,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	140094696	140094792	chr7:140094696-140094792	3	-	140094696	140094696	8553170	1	96,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	140177183	140179640	chr7:140177183-140179640	3	+	140177183	140177183	789624	1	2457,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	140209562	140209671	chr7:140209562-140209671	3	-	140209562	140209562	8553170	1	109,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	140241869	140242032	chr7:140241869-140242032	3	+	140241869	140241869	8553170	1	163,	0,
#Deleted in new
chr7	140282464	140282920	chr7:140282464-140282920	7	+	140282464	140282464	16724991	1	456,	0,
#Partially deleted in new
chr7	140292751	140293339	chr7:140292751-140293339	7	+	140292751	140292751	16724991	1	588,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	140293692	140398489	chr7:140293692-140398489	0	-	140351394	140382526	789624	16	1660,153,224,66,152,48,102,142,179,97,146,84,93,109,159,74,	0,2292,3607,43591,49719,51523,52176,54933,57580,61975,64947,70715,75897,86589,88745,104723,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	140333751	140398549	chr7:140333751-140398549	3	-	140335411	140382526	789624	15	1753,66,152,48,102,142,179,85,97,146,84,93,109,159,134,	0,3532,9660,11464,12117,14874,17521,18310,21916,24888,30656,35838,46530,48686,64664,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	140333751	140398457	chr7:140333751-140398457	1	-	140335262	140382526	789624	12	1753,66,142,179,85,97,146,84,93,109,159,42,	0,3532,14874,17521,18310,21916,24888,30656,35838,46530,48686,64664,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	140333751	140398502	chr7:140333751-140398502	1	-	140335411	140382526	789624	14	1753,66,152,102,142,179,85,97,146,84,93,109,159,87,	0,3532,9660,12117,14874,17521,18310,21916,24888,30656,35838,46530,48686,64664,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	140333753	140344086	chr7:140333753-140344086	0	-	140333753	140333753	8553170	3	1751,66,675,	0,3530,9658,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	140333790	140343489	chr7:140333790-140343489	0	-	140335411	140343489	789624	2	1714,78,	0,9621,
#Partially deleted in new
chr7	140334869	140345911	chr7:140334869-140345911	0	-	140335262	140345911	789624	5	570,66,152,48,43,	0,2414,8542,10346,10999,
#Partially deleted in new
chr7	140334890	140348686	chr7:140334890-140348686	0	-	140335262	140348686	789624	3	614,66,61,	0,2393,13735,
#Partially deleted in new
chr7	140334988	140343530	chr7:140334988-140343530	0	-	140335262	140343530	789624	2	451,119,	0,8423,
#Partially deleted in new
chr7	140335104	140351357	chr7:140335104-140351357	0	-	140335411	140351357	789624	3	400,66,85,	0,2179,16168,
#Partially deleted in new
chr7	140335289	140345907	chr7:140335289-140345907	0	-	140335289	140345907	789624	5	147,66,152,48,39,	0,1994,8122,9926,10579,
#Partially deleted in new
chr7	140335320	140398508	chr7:140335320-140398508	0	-	140335320	140335320	8553170	14	184,66,152,48,102,142,697,85,97,84,93,109,159,93,	0,1963,8091,9895,10548,13305,15952,16741,20347,29087,34269,44961,47117,63095,
#Partially deleted in new
chr7	140335454	140352100	chr7:140335454-140352100	0	-	140335454	140352100	789624	6	50,66,102,142,179,39,	0,1829,10414,13171,15818,16607,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	140335471	140337825	chr7:140335471-140337825	0	-	140335471	140335471	8553170	2	33,542,	0,1812,
#Partially deleted in new
chr7	140348457	140351405	chr7:140348457-140351405	0	-	140348457	140348457	8553170	2	310,133,	0,2815,
#Partially deleted in new
chr7	140348625	140369654	chr7:140348625-140369654	0	-	140348625	140369654	789624	5	142,97,146,84,65,	0,7042,10014,15782,20964,
#Partially deleted in new
chr7	140351360	140364491	chr7:140351360-140364491	0	-	140352130	140364491	789624	5	91,120,97,146,84,	0,701,4307,7279,13047,
#Partially deleted in new
chr7	140351430	140398481	chr7:140351430-140398481	0	-	140358709	140382526	789624	6	21,85,97,146,159,66,	0,631,4237,7209,31007,46985,
#Partially deleted in new
chr7	140351519	140398504	chr7:140351519-140398504	0	-	140351519	140351519	8553170	8	450,85,97,146,93,109,159,89,	0,542,4148,7120,18070,28762,30918,46896,
#Partially deleted in new
chr7	140351875	140369682	chr7:140351875-140369682	0	-	140351875	140351875	8553170	6	94,85,97,146,84,93,	0,186,3792,6764,12532,17714,
#Partially deleted in new
chr7	140351888	140369662	chr7:140351888-140369662	0	-	140352130	140369662	789624	6	81,120,97,146,84,73,	0,173,3779,6751,12519,17701,
#Partially deleted in new
chr7	140352061	140398532	chr7:140352061-140398532	0	-	140352061	140382526	789624	6	85,84,93,109,159,117,	0,12346,17528,28220,30376,46354,
#Partially deleted in new
chr7	140358639	140398550	chr7:140358639-140398550	0	-	140358639	140358639	8553170	5	146,84,93,159,135,	0,5768,10950,23798,39776,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	140370440	140370545	chr7:140370440-140370545	7	+	140370440	140370440	16724991	1	105,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	140379877	140382474	chr7:140379877-140382474	0	-	140379877	140379877	8553170	2	513,37,	0,2560,
#Partially deleted in new
chr7	140382482	140404310	chr7:140382482-140404310	0	-	140382482	140382526	789624	4	114,83,221,126,	0,16116,20119,21702,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	140386780	140386907	chr7:140386780-140386907	7	-	140386780	140386780	16724991	1	127,	0,
#Duplicated in new
chr7	140400335	140404433	chr7:140400335-140404433	0	-	140400335	140400335	8553170	2	2487,249,	0,3849,
#Partially deleted in new
chr7	140404042	140425943	chr7:140404042-140425943	0	+	140407646	140425943	789624	4	175,224,184,62,	0,3581,7831,21839,
#Partially deleted in new
chr7	140404042	140426250	chr7:140404042-140426250	3	+	140407646	140426150	789624	4	175,224,184,369,	0,3581,7831,21839,
#Partially deleted in new
chr7	140407578	140426250	chr7:140407578-140426250	1	+	140407646	140426150	789624	3	269,184,369,	0,4295,18303,
#Deleted in new
chr7	140435315	140435787	chr7:140435315-140435787	7	-	140435315	140435315	16724991	1	472,	0,
#Partially deleted in new
chr7	140453039	140479569	chr7:140453039-140479569	3	-	140454516	140479344	789624	8	1690,139,111,215,227,230,129,410,	0,2055,2750,3612,5967,6667,18843,26120,
#Partially deleted in new
chr7	140453046	140479336	chr7:140453046-140479336	0	-	140453046	140453046	8553170	7	1683,806,215,227,230,129,177,	0,2048,3605,5960,6660,18836,26113,
#Partially deleted in new
chr7	140454142	140479368	chr7:140454142-140479368	0	-	140456652	140479344	789624	6	587,139,111,215,129,209,	0,952,1647,2509,17740,25017,
#Partially deleted in new
chr7	140454267	140478984	chr7:140454267-140478984	1	-	140454516	140472004	789624	8	462,139,111,215,227,230,129,148,	0,827,1522,2384,4739,5439,17615,24569,
#Deleted in new
chr7	140454463	140455911	chr7:140454463-140455911	0	-	140454584	140455911	789624	3	266,139,55,	0,631,1393,
#Deleted in new
chr7	140454664	140456919	chr7:140454664-140456919	0	-	140454664	140454664	8553170	4	65,139,111,268,	0,430,1125,1987,
#Partially deleted in new
chr7	140456179	140478926	chr7:140456179-140478926	1	-	140456652	140472004	789624	3	687,129,90,	0,15703,22657,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	140456185	140479355	chr7:140456185-140479355	0	-	140474392	140479344	789624	7	681,227,230,129,53,109,196,	0,2821,3521,15697,17589,18195,22974,
#Partially deleted in new
chr7	140456191	140479499	chr7:140456191-140479499	1	-	140456647	140479344	789624	5	675,227,230,129,340,	0,2815,3515,15691,22968,
#Partially deleted in new
chr7	140459006	140479066	chr7:140459006-140479066	0	-	140459006	140472004	789624	4	227,230,129,467,	0,700,12876,19593,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	140459090	140478656	chr7:140459090-140478656	0	-	140459090	140472004	789624	5	143,230,129,109,522,	0,616,12792,15290,19044,
#Partially deleted in new
chr7	140459177	140478503	chr7:140459177-140478503	0	-	140459177	140472004	789624	4	56,230,129,369,	0,529,12705,18957,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	140459797	140479037	chr7:140459797-140479037	0	-	140459797	140473281	789624	6	139,129,89,53,109,201,	0,12085,13446,13977,14583,19039,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	140459840	140479182	chr7:140459840-140479182	0	-	140474392	140479182	789624	5	96,129,203,109,23,	0,12042,12362,14540,19319,
#Partially deleted in new
chr7	140518419	140640776	chr7:140518419-140640776	3	-	140518706	140602397	789624	19	319,87,246,118,42,178,149,141,78,70,110,188,51,94,201,122,128,1140,273,	0,1212,3435,4887,7331,8898,26198,28379,37216,39723,41288,48666,50343,51225,55388,67169,69233,82983,122084,
#Partially deleted in new
chr7	140518429	140602542	chr7:140518429-140602542	1	-	140518706	140602397	789624	18	309,87,246,118,42,178,149,141,78,70,110,188,51,94,201,122,128,1140,	0,1202,3425,4877,7321,8888,26188,28369,37206,39713,41278,48656,50333,51215,55378,67159,69223,82973,
#Partially deleted in new
chr7	140518459	140602512	chr7:140518459-140602512	0	-	140523318	140602397	789624	18	279,87,246,118,42,120,149,141,78,70,110,188,51,94,201,122,128,1110,	0,1172,3395,4847,7291,8858,26158,28339,37176,39683,41248,48626,50303,51185,55348,67129,69193,82943,
#Partially deleted in new
chr7	140518463	140640545	chr7:140518463-140640545	1	-	140518706	140602397	789624	20	275,87,246,118,42,178,149,141,78,70,110,188,51,94,201,122,128,1140,102,42,	0,1168,3391,4843,7287,8854,26154,28335,37172,39679,41244,48622,50299,51181,55344,67125,69189,82939,87241,122040,
#Partially deleted in new
chr7	140527315	140555713	chr7:140527315-140555713	0	-	140527315	140555713	789624	4	122,149,141,78,	0,17302,19483,28320,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	140543577	140605806	chr7:140543577-140605806	1	-	140544556	140602397	789624	13	1189,141,78,70,110,188,51,94,201,122,128,1140,102,	0,3221,12058,14565,16130,23508,25185,26067,30230,42011,44075,57825,62127,
#Partially deleted in new
chr7	140569644	140640786	chr7:140569644-140640786	0	-	140573807	140585702	789624	5	94,201,122,128,283,	0,4163,15944,18008,70859,
#Partially deleted in new
chr7	140601924	140641485	chr7:140601924-140641485	0	-	140601924	140602397	789624	3	618,102,80,	0,3780,39481,
#Partially deleted in new
chr7	140602125	140673993	chr7:140602125-140673993	0	-	140602125	140602397	789624	2	417,120,	0,71748,
#Partially deleted in new
chr7	140602161	140640298	chr7:140602161-140640298	0	-	140602161	140602397	789624	3	381,102,59,	0,3543,38078,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	140609846	140609955	chr7:140609846-140609955	3	+	140609846	140609846	8553170	1	109,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	140640908	140669476	chr7:140640908-140669476	3	+	140640908	140640908	8553170	6	366,151,192,236,253,2873,	0,6812,10906,11485,14680,25695,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	140645828	140646126	chr7:140645828-140646126	3	+	140645828	140645828	8553170	1	298,	0,
#Partially deleted in new
chr7	140673152	140695121	chr7:140673152-140695121	3	+	140673330	140694803	789624	8	1111,147,129,96,252,129,54,459,	0,1458,6002,7889,13837,16444,17607,21510,
#Partially deleted in new
chr7	140673152	140695945	chr7:140673152-140695945	1	+	140673330	140695804	789624	8	1111,147,129,96,252,129,54,174,	0,1458,6002,7889,13837,16444,17607,22619,
#Partially deleted in new
chr7	140673818	140696261	chr7:140673818-140696261	0	+	140673818	140696185	789624	8	445,147,129,96,252,129,54,235,	0,792,5336,7223,13171,15778,16941,22208,
#Partially deleted in new
chr7	140674483	140687153	chr7:140674483-140687153	0	+	140674483	140674483	8553170	4	274,129,96,164,	0,4671,6558,12506,
#Partially deleted in new
chr7	140679154	140695081	chr7:140679154-140695081	0	+	140679154	140694803	789624	5	129,96,252,54,419,	0,1887,7835,11605,15508,
#Partially deleted in new
chr7	140690776	140706646	chr7:140690776-140706646	1	+	140702959	140704934	789624	6	37,84,90,145,104,84,	0,5142,10093,12089,14083,15786,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	140695335	140697077	chr7:140695335-140697077	3	-	140695335	140695335	789624	2	1485,163,	0,1579,
#Partially deleted in new
chr7	140696670	140722790	chr7:140696670-140722790	3	+	140696744	140704934	0	4	172,145,110,1239,	0,6195,8189,24881,
#Partially deleted in new
chr7	140696671	140706646	chr7:140696671-140706646	1	+	140696744	140704934	0	4	171,145,104,84,	0,6194,8188,9891,
#Partially deleted in new
chr7	140696687	140721955	chr7:140696687-140721955	1	+	140696744	140721744	789624	2	155,404,	0,24864,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	140696689	140705662	chr7:140696689-140705662	1	+	140696744	140704934	0	3	153,145,803,	0,6176,8170,
#Partially deleted in new
chr7	140696708	140704963	chr7:140696708-140704963	0	+	140696708	140696708	8553170	4	134,86,145,104,	0,4165,6157,8151,
#Partially deleted in new
chr7	140696709	140706646	chr7:140696709-140706646	0	+	140696744	140698081	789624	5	133,194,145,104,84,	0,1365,6156,8150,9853,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	140696747	140706500	chr7:140696747-140706500	0	+	140696747	140704934	789624	4	95,145,104,382,	0,6118,8112,9371,
#Partially deleted in new
chr7	140696987	140706646	chr7:140696987-140706646	1	+	140702959	140704934	789624	4	87,145,104,84,	0,5878,7872,9575,
#Partially deleted in new
chr7	140696991	140706643	chr7:140696991-140706643	1	+	140702959	140704934	789624	5	83,90,145,104,81,	0,3878,5874,7868,9571,
#Partially deleted in new
chr7	140697156	140706640	chr7:140697156-140706640	1	+	140702959	140704934	789624	5	65,90,145,104,78,	0,3713,5709,7703,9406,
#Partially deleted in new
chr7	140697223	140706644	chr7:140697223-140706644	1	+	140697329	140704934	789624	4	168,145,104,82,	0,5642,7636,9339,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	140700192	140701104	chr7:140700192-140701104	0	+	140700192	140700192	8553170	2	26,408,	0,504,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	140701844	140706642	chr7:140701844-140706642	1	+	140702037	140704934	789624	4	210,145,104,80,	0,1021,3015,4718,
#Partially deleted in new
chr7	140702522	140706635	chr7:140702522-140706635	0	+	140702522	140702522	8553170	3	488,104,73,	0,2337,4040,
#Partially deleted in new
chr7	140719326	140924810	chr7:140719326-140924810	1	-	140726493	140924703	789624	19	7190,154,135,132,119,47,177,85,118,137,37,160,120,149,103,104,264,102,245,	0,15290,20485,29960,33948,34860,57585,58664,62249,63694,68221,74981,81035,82085,88633,89565,115282,130784,205239,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr7	140725144	140824398	chr7:140725144-140824398	0	-	140725144	140725144	8553170	17	1372,135,132,119,47,177,85,118,137,37,108,120,149,103,80,104,866,	0,14667,24142,28130,29042,51767,52846,56431,57876,62403,69163,75217,76267,82815,83092,83747,98388,
#Partially deleted in new
chr7	140726368	140924703	chr7:140726368-140924703	1	-	140726493	140924703	789624	20	148,154,135,132,119,47,177,85,118,137,120,37,160,120,149,103,104,264,102,138,	0,8248,13443,22918,26906,27818,50543,51622,55207,56652,59320,61179,67939,73993,75043,81591,82523,108240,123742,198197,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr7	140730664	140924928	chr7:140730664-140924928	3	-	140734596	140924703	0	18	4106,135,132,119,47,177,85,118,137,37,160,120,149,103,104,264,102,363,	0,9147,18622,22610,23522,46247,47326,50911,52356,56883,63643,69697,70747,77295,78227,103944,119446,193901,
#Partially deleted in new
chr7	140732562	140924712	chr7:140732562-140924712	0	-	140732562	140732562	789624	18	2208,135,132,959,177,85,118,137,37,160,120,149,103,80,104,264,102,147,	0,7249,16724,20712,44349,45428,49013,50458,54985,61745,67799,68849,75397,75674,76329,102046,117548,192003,
#Partially deleted in new
chr7	140734313	140924712	chr7:140734313-140924712	0	-	140800419	140924703	789624	18	457,135,132,119,47,177,85,118,137,37,160,101,149,103,104,264,102,147,	0,5498,14973,18961,19873,42598,43677,47262,48707,53234,59994,66048,67098,73646,74578,100295,115797,190252,
#Partially deleted in new
chr7	140734485	140924732	chr7:140734485-140924732	1	-	140734596	140924703	789624	19	285,135,132,119,47,177,85,118,137,120,37,160,120,149,103,104,264,102,167,	0,5326,14801,18789,19701,42426,43505,47090,48535,51203,53062,59822,65876,66926,73474,74406,100123,115625,190080,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	140734486	140741717	chr7:140734486-140741717	0	-	140734486	140734486	8553170	2	284,1906,	0,5325,
#Partially deleted in new
chr7	140734486	140924708	chr7:140734486-140924708	0	-	140773345	140924703	789624	21	284,135,82,132,119,47,191,140,177,85,118,137,37,160,120,149,103,104,264,102,143,	0,5325,12879,14800,18788,19700,23613,38780,42425,43504,47089,48534,53061,59821,65875,66925,73473,74405,100122,115624,190079,
#Partially deleted in new
chr7	140734520	140781677	chr7:140734520-140781677	0	-	140747414	140781677	789624	9	250,135,82,132,119,47,177,85,102,	0,5291,12845,14766,18754,19666,42391,43470,47055,
#Partially deleted in new
chr7	140734557	140800437	chr7:140734557-140800437	0	-	140747421	140800437	789624	14	213,135,82,121,132,119,47,177,85,118,137,37,160,76,	0,5254,12808,14374,14729,18717,19629,42354,43433,47018,48463,52990,59750,65804,
#Partially deleted in new
chr7	140734557	140800384	chr7:140734557-140800384	0	-	140749330	140800384	789624	10	213,135,132,177,85,118,137,37,160,23,	0,5254,14729,42354,43433,47018,48463,52990,59750,65804,
#Partially deleted in new
chr7	140734596	140924709	chr7:140734596-140924709	0	-	140808294	140924703	789624	19	174,135,132,119,47,177,85,118,137,37,160,120,149,103,80,104,264,102,144,	0,5215,14690,18678,19590,42315,43394,46979,48424,52951,59711,65765,66815,73363,73640,74295,100012,115514,189969,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	140780358	140783464	chr7:140780358-140783464	0	-	140780358	140780358	8553170	2	1335,444,	0,2662,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	140799053	140924726	chr7:140799053-140924726	0	-	140799053	140799053	8553170	7	1428,149,103,113,264,102,161,	0,2358,8906,9829,35555,51057,125512,
#Partially deleted in new
chr7	140801019	140808271	chr7:140801019-140808271	0	-	140801019	140801019	8553170	2	541,312,	0,6940,
#Partially deleted in new
chr7	140808891	140924703	chr7:140808891-140924703	0	-	140808891	140808891	8553170	4	104,95,102,138,	0,25717,41219,115674,
#Partially deleted in new
chr7	140822384	140924706	chr7:140822384-140924706	0	-	140822384	140822384	8553170	4	68,264,102,141,	0,12224,27726,102181,
#Deleted in new
chr7	140833968	140836233	chr7:140833968-140836233	0	-	140833968	140833968	8553170	1	2265,	0,
#Partially deleted in new
chr7	140833971	140924742	chr7:140833971-140924742	1	-	140834593	140924703	789624	3	901,102,177,	0,16139,90594,
#Deleted in new
chr7	140934866	140935010	chr7:140934866-140935010	7	+	140934866	140934866	16724991	1	144,	0,
#Partially deleted in new
chr7	140997951	140999800	chr7:140997951-140999800	7	-	140997951	140997951	16724991	2	939,619,	0,1230,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	141002609	141014983	chr7:141002609-141014983	3	-	141006429	141010633	0	3	3926,242,73,	0,7809,12301,
#Partially deleted in new
chr7	141006053	141014679	chr7:141006053-141014679	1	-	141006429	141010633	0	3	482,242,129,	0,4365,8497,
#Partially deleted in new
chr7	141006167	141015228	chr7:141006167-141015228	1	-	141006429	141010633	0	3	368,242,134,	0,4251,8927,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	141006167	141010094	chr7:141006167-141010094	0	-	141006167	141006167	8553170	2	368,420,	0,3507,
#Partially deleted in new
chr7	141006167	141014648	chr7:141006167-141014648	0	-	141006167	141006167	8553170	2	368,98,	0,8383,
#Partially deleted in new
chr7	141006167	141014429	chr7:141006167-141014429	1	-	141006429	141010633	0	3	368,242,78,	0,4251,8184,
#Partially deleted in new
chr7	141006168	141014966	chr7:141006168-141014966	1	-	141006429	141010603	789624	3	367,199,56,	0,4250,8742,
#Partially deleted in new
chr7	141010158	141014949	chr7:141010158-141014949	0	-	141010158	141010158	8553170	2	502,39,	0,4752,
#Partially deleted in new
chr7	141010227	141014652	chr7:141010227-141014652	0	-	141010227	141010227	8553170	2	433,102,	0,4323,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	141052248	141052409	chr7:141052248-141052409	3	+	141052248	141052248	8553170	1	161,	0,
#Partially deleted in new
chr7	141074231	141480380	chr7:141074231-141480380	3	+	141074310	141470786	789624	4	461,114,138,9845,	0,138359,363376,396304,
#Partially deleted in new
chr7	141074231	141480380	chr7:141074231-141480380	1	+	141074310	141470786	789624	6	461,70,31,7,138,9845,	0,138359,222863,222897,363376,396304,
#Partially deleted in new
chr7	141074392	141212764	chr7:141074392-141212764	0	+	141074392	141074392	8553170	2	300,174,	0,138198,
#Deleted in new
chr7	141173042	141173216	chr7:141173042-141173216	7	-	141173042	141173042	16724991	1	174,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	141351976	141352768	chr7:141351976-141352768	7	+	141351976	141351976	16724991	2	387,91,	0,701,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	141392154	141396517	chr7:141392154-141396517	3	-	141392154	141392154	8553170	3	3279,59,107,	0,4056,4256,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	141414382	141416390	chr7:141414382-141416390	3	-	141414382	141414382	8553170	2	1053,386,	0,1622,
#Deleted in new
chr7	141429710	141431268	chr7:141429710-141431268	3	-	141429710	141429710	8553170	2	484,112,	0,1446,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	141512697	141513183	chr7:141512697-141513183	3	-	141512697	141512697	8553170	2	175,210,	0,276,
#Partially deleted in new
chr7	141529202	141551304	chr7:141529202-141551304	3	-	141529202	141529202	8553170	4	73,171,69,161,	0,1870,18129,21941,
#Partially deleted in new
chr7	141530915	141551193	chr7:141530915-141551193	0	-	141530915	141530915	8553170	2	328,50,	0,20228,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	141551188	141655244	chr7:141551188-141655244	3	+	141555466	141652924	789624	16	246,115,40,80,76,93,33,95,70,80,58,151,98,71,85,2458,	0,4264,41957,45373,50016,60006,62957,64282,70543,82712,85771,90059,90622,98074,100336,101598,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	141551277	141654409	chr7:141551277-141654409	1	+	141555466	141641828	789624	15	157,115,40,80,67,93,33,95,70,80,58,98,71,85,1623,	0,4175,41868,45284,49936,59917,62868,64193,70454,82623,85682,90533,97985,100247,101509,
#Partially deleted in new
chr7	141551394	141653147	chr7:141551394-141653147	1	+	141555554	141652924	789624	17	40,115,4,40,80,76,93,33,95,70,80,58,151,98,71,85,361,	0,4058,10712,41751,45167,49810,59800,62751,64076,70337,82506,85565,89853,90416,97868,100130,101392,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	141551403	141654231	chr7:141551403-141654231	0	+	141555466	141637016	8553170	14	31,104,40,80,76,93,33,95,70,58,151,98,71,2707,	0,4060,41742,45158,49801,59791,62742,64067,70328,85556,89844,90407,97859,100121,
#Partially deleted in new
chr7	141551406	141650551	chr7:141551406-141650551	0	+	141551406	141551406	8553170	15	28,104,40,80,76,93,33,95,70,80,58,151,98,71,841,	0,4057,41739,45155,49798,59788,62739,64064,70325,82494,85553,89841,90404,97856,98304,
#Partially deleted in new
chr7	141551406	141652888	chr7:141551406-141652888	0	+	141555466	141596601	8553170	16	28,115,80,66,76,93,33,95,70,80,58,151,98,71,85,102,	0,4046,45155,49085,49798,59788,62739,64064,70325,82494,85553,89841,90404,97856,100118,101380,
#Partially deleted in new
chr7	141551409	141599308	chr7:141551409-141599308	0	+	141551409	141551409	8553170	5	25,115,40,80,307,	0,4043,41736,45152,47592,
#Partially deleted in new
chr7	141551409	141636981	chr7:141551409-141636981	0	+	141601259	141636981	8553170	10	25,40,80,76,93,33,95,70,80,22,	0,41736,45152,49795,59785,62736,64061,70322,82491,85550,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	141551409	141653911	chr7:141551409-141653911	1	+	141555466	141652924	789624	16	25,115,40,80,76,93,33,95,70,80,58,151,98,71,85,1125,	0,4043,41736,45152,49795,59785,62736,64061,70322,82491,85550,89838,90401,97853,100115,101377,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	141551411	141654226	chr7:141551411-141654226	0	+	141601259	141624272	8553170	16	23,40,80,76,93,33,95,70,117,80,58,151,98,71,85,1440,	0,41734,45150,49793,59783,62734,64059,70320,72768,82489,85548,89836,90399,97851,100113,101375,
#Partially deleted in new
chr7	141551417	141621790	chr7:141551417-141621790	0	+	141555466	141596601	789624	8	17,115,80,76,93,33,95,59,	0,4035,45144,49787,59777,62728,64053,70314,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	141551418	141653857	chr7:141551418-141653857	0	+	141555466	141614196	8553170	16	16,115,40,80,76,93,437,95,70,80,58,151,98,71,85,1071,	0,4034,41727,45143,49786,59776,62727,64052,70313,82482,85541,89829,90392,97844,100106,101368,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	141551431	141654072	chr7:141551431-141654072	1	+	141601259	141652924	8553170	15	68,40,80,76,93,33,95,70,80,58,151,98,71,85,1286,	0,41714,45130,49773,59763,62714,64039,70300,82469,85528,89816,90379,97831,100093,101355,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	141551433	141653831	chr7:141551433-141653831	1	+	141555466	141652924	789624	16	66,115,40,80,76,93,33,95,70,80,58,151,98,71,85,1045,	0,4019,41712,45128,49771,59761,62712,64037,70298,82467,85526,89814,90377,97829,100091,101353,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr7	141551563	141654058	chr7:141551563-141654058	1	+	141555466	141652924	789624	16	55,115,40,80,76,93,33,95,70,80,58,151,98,71,85,1272,	0,3889,41582,44998,49641,59631,62582,63907,70168,82337,85396,89684,90247,97699,99961,101223,
#Partially deleted in new
chr7	141555438	141615880	chr7:141555438-141615880	0	+	141555438	141555438	8553170	8	129,40,80,76,93,33,95,7,	0,37707,41123,45766,55756,58707,60032,60435,
#Partially deleted in new
chr7	141555438	141650599	chr7:141555438-141650599	1	+	141555466	141650479	8553170	14	129,40,80,76,93,33,95,70,80,58,151,98,71,127,	0,37707,41123,45766,55756,58707,60032,66293,78462,81521,85809,86372,93824,95034,
#Partially deleted in new
chr7	141555452	141594195	chr7:141555452-141594195	1	+	141555466	141593361	789624	3	115,40,891,	0,37693,37852,
#Partially deleted in new
chr7	141555452	141651575	chr7:141555452-141651575	0	+	141555466	141641828	789624	13	115,40,80,67,93,33,95,70,80,58,98,71,51,	0,37693,41109,45761,55742,58693,60018,66279,78448,81507,86358,93810,96072,
#Partially deleted in new
chr7	141555455	141616024	chr7:141555455-141616024	0	+	141555455	141555455	8553170	7	112,40,80,76,93,33,554,	0,37690,41106,45749,55739,58690,60015,
#Partially deleted in new
chr7	141555465	141597340	chr7:141555465-141597340	0	+	141555465	141555465	8553170	3	102,40,779,	0,37680,41096,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	141593154	141625585	chr7:141593154-141625585	0	+	141593154	141593154	8553170	9	31,80,76,93,33,95,70,1104,211,	0,3407,8050,18040,20991,22316,28577,31025,32220,
#Partially deleted in new
chr7	141601220	141616368	chr7:141601220-141616368	0	+	141601220	141601220	8553170	5	60,93,33,99,206,	0,9974,12925,14250,14942,
#Partially deleted in new
chr7	141649130	141653065	chr7:141649130-141653065	0	+	141649130	141649130	8553170	3	203,85,279,	0,2394,3656,
#Partially deleted in new
chr7	141652380	141656810	chr7:141652380-141656810	3	-	141652380	141652380	8553170	2	503,267,	0,4163,
#Partially deleted in new
chr7	141656727	141702153	chr7:141656727-141702153	3	-	141662655	141702153	789624	9	6124,69,151,132,139,154,159,100,268,	0,7444,8176,8459,9559,17339,28750,29831,45158,
#Partially deleted in new
chr7	141661929	141701615	chr7:141661929-141701615	1	-	141662655	141686653	789624	9	922,69,151,132,100,154,159,100,60,	0,2242,2974,3257,4357,12137,23548,24629,39626,
#Deleted in new
chr7	141662921	141663846	chr7:141662921-141663846	3	-	141662921	141662921	8553170	1	925,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	141704337	141738230	chr7:141704337-141738230	3	-	141704337	141704337	789624	7	1420,186,109,175,154,185,33,	0,9851,19578,22866,23654,33045,33860,
#Partially deleted in new
chr7	141704631	141738220	chr7:141704631-141738220	0	-	141704631	141704631	8553170	3	1126,109,23,	0,19284,33566,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	141704631	141738257	chr7:141704631-141738257	1	-	141704631	141704631	8553170	7	1126,186,109,439,154,185,60,	0,9557,19284,22572,23360,32751,33566,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	141705695	141738252	chr7:141705695-141738252	0	-	141705695	141705695	8553170	5	62,109,154,185,55,	0,18220,22296,31687,32502,
#Partially deleted in new
chr7	141708352	141731271	chr7:141708352-141731271	3	+	141708758	141730320	0	12	748,197,46,173,122,147,108,86,171,143,143,977,	0,5856,7869,10719,12582,14781,15588,15837,16673,18951,21178,21942,
#Partially deleted in new
chr7	141719161	141727367	chr7:141719161-141727367	0	+	141719161	141727367	789624	6	83,122,147,108,86,64,	0,1773,3972,4779,5028,8142,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	141723901	141737775	chr7:141723901-141737775	0	-	141723901	141723901	8553170	3	123,154,393,	0,4090,13481,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	141727648	141738231	chr7:141727648-141738231	0	-	141727648	141727648	8553170	2	497,34,	0,10549,
#Partially deleted in new
chr7	141738320	141750461	chr7:141738320-141750461	1	+	141739166	141750354	0	7	90,67,61,141,88,89,151,	0,803,3848,5240,5581,7175,11990,
#Partially deleted in new
chr7	141738333	141750488	chr7:141738333-141750488	1	+	141739166	141750354	0	7	260,67,61,141,88,89,178,	0,790,3835,5227,5568,7162,11977,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	141738357	141741690	chr7:141738357-141741690	0	+	141738357	141738357	8553170	2	53,2567,	0,766,
#Partially deleted in new
chr7	141738357	141750354	chr7:141738357-141750354	1	+	141739166	141750354	0	7	146,67,61,141,88,89,44,	0,766,3811,5203,5544,7138,11953,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	141738364	141746526	chr7:141738364-141746526	0	+	141738364	141738364	8553170	6	46,67,61,141,88,1031,	0,759,3804,5196,5537,7131,
#Partially deleted in new
chr7	141738390	141750456	chr7:141738390-141750456	0	+	141738390	141738390	789624	8	20,67,50,61,141,88,89,146,	0,733,3358,3778,5170,5511,7105,11920,
#Partially deleted in new
chr7	141738395	141750314	chr7:141738395-141750314	0	+	141739166	141750314	789624	7	180,67,61,141,88,89,4,	0,728,3773,5165,5506,7100,11915,
#Partially deleted in new
chr7	141738399	141787922	chr7:141738399-141787922	3	+	141739166	141750354	0	8	11,67,61,141,88,89,74,200,	0,724,3769,5161,5502,7096,11911,49323,
#Deleted in new
chr7	141738400	141740714	chr7:141738400-141740714	0	+	141738400	141738400	8553170	2	103,1591,	0,723,
#Partially deleted in new
chr7	141738400	141745545	chr7:141738400-141745545	0	+	141739166	141745545	789624	6	193,67,61,141,88,50,	0,723,3768,5160,5501,7095,
#Partially deleted in new
chr7	141738405	141750332	chr7:141738405-141750332	0	+	141738405	141738405	8553170	8	5,67,44,61,141,88,89,22,	0,718,3343,3763,5155,5496,7090,11905,
#Deleted in new
chr7	141738408	141739756	chr7:141738408-141739756	0	+	141738408	141738408	8553170	2	167,633,	0,715,
#Partially deleted in new
chr7	141738599	141750461	chr7:141738599-141750461	1	+	141739166	141750354	0	7	79,67,61,141,88,89,151,	0,524,3569,4961,5302,6896,11711,
#Partially deleted in new
chr7	141738602	141742229	chr7:141738602-141742229	0	+	141739166	141742229	789624	3	342,67,61,	0,521,3566,
#Partially deleted in new
chr7	141738606	141750461	chr7:141738606-141750461	1	+	141739166	141750354	0	7	392,67,61,141,88,89,151,	0,517,3562,4954,5295,6889,11704,
#Deleted in new
chr7	141764096	141765197	chr7:141764096-141765197	3	+	141764158	141765109	789624	1	1101,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	141778441	141780819	chr7:141778441-141780819	3	+	141778488	141779388	789624	1	2378,	0,
#Deleted in new
chr7	141787814	141788640	chr7:141787814-141788640	7	+	141787814	141787814	16724991	1	826,	0,
#Deleted in new
chr7	141790216	141791367	chr7:141790216-141791367	3	+	141790361	141791261	789624	1	1151,	0,
#Deleted in new
chr7	141801314	141802059	chr7:141801314-141802059	7	-	141801314	141801314	16724991	1	745,	0,
#Deleted in new
chr7	141802481	141803487	chr7:141802481-141803487	7	-	141802481	141802481	16724991	1	1006,	0,
#Deleted in new
chr7	141803700	141804652	chr7:141803700-141804652	7	-	141803700	141803700	16724991	1	952,	0,
#Deleted in new
chr7	141811804	141812257	chr7:141811804-141812257	7	+	141811804	141811804	16724991	1	453,	0,
#Partially deleted in new
chr7	141836285	141841421	chr7:141836285-141841421	1	-	141836394	141841049	789624	5	250,137,254,142,406,	0,826,1574,3052,4730,
#Partially deleted in new
chr7	141836299	141841485	chr7:141836299-141841485	0	-	141838973	141841049	789624	7	236,137,90,1145,142,53,31,	0,812,1261,1560,3038,4716,5155,
#Partially deleted in new
chr7	141836328	141841487	chr7:141836328-141841487	3	-	141836394	141841049	789624	6	207,137,254,142,53,33,	0,783,1531,3009,4687,5126,
#Partially deleted in new
chr7	141836358	141841211	chr7:141836358-141841211	0	-	141838059	141841049	789624	5	177,137,254,110,196,	0,753,1501,2979,4657,
#Deleted in new
chr7	141862859	141863737	chr7:141862859-141863737	7	+	141862859	141862859	16724991	1	878,	0,
#Deleted in new
chr7	141863103	141863562	chr7:141863103-141863562	4	+	141863103	141863103	16724991	1	459,	0,
#Deleted in new
chr7	141887147	141888092	chr7:141887147-141888092	7	+	141887147	141887147	16724991	1	945,	0,
#Deleted in new
chr7	141887521	141887864	chr7:141887521-141887864	4	+	141887521	141887521	16724991	1	343,	0,
#Partially deleted in new
chr7	141907812	142021080	chr7:141907812-142021080	0	+	142005530	142021080	789624	6	56,177,129,200,121,107,	0,38008,97716,100693,111386,113161,
#Partially deleted in new
chr7	141907832	141931849	chr7:141907832-141931849	0	+	141907832	141907832	8553170	3	36,244,275,	0,21944,23742,
#Deleted in new
chr7	141911216	141911549	chr7:141911216-141911549	5	+	141911216	141911216	16724991	1	333,	0,
#Deleted in new
chr7	141911462	141911943	chr7:141911462-141911943	7	+	141911462	141911462	16724991	1	481,	0,
#Partially deleted in new
chr7	141916398	141920625	chr7:141916398-141920625	3	+	141918875	141919820	789624	2	238,1780,	0,2447,
#Deleted in new
chr7	141918816	141919909	chr7:141918816-141919909	1	+	141918875	141919820	789624	1	1093,	0,
#Partially deleted in new
chr7	141927356	141946983	chr7:141927356-141946983	3	-	141930103	141946292	0	7	2862,107,137,69,60,99,177,	0,4363,8457,16539,17984,18857,19450,
#Partially deleted in new
chr7	141929130	141947007	chr7:141929130-141947007	0	-	141931803	141946292	789624	5	1088,107,60,99,201,	0,2589,16210,17083,17676,
#Partially deleted in new
chr7	141929339	141946944	chr7:141929339-141946944	1	-	141930103	141946292	789624	6	879,107,137,60,99,138,	0,2380,6474,16001,16874,17467,
#Partially deleted in new
chr7	141930014	141946936	chr7:141930014-141946936	1	-	141930103	141945373	789624	4	204,107,60,130,	0,1705,15326,16792,
#Partially deleted in new
chr7	141931506	141946933	chr7:141931506-141946933	1	-	141931634	141946292	789624	5	320,137,60,99,127,	0,4307,13834,14707,15300,
#Partially deleted in new
chr7	141931507	141946887	chr7:141931507-141946887	0	-	141931507	141931507	8553170	2	319,81,	0,15299,
#Partially deleted in new
chr7	141931766	141936331	chr7:141931766-141936331	0	-	141931766	141931766	8553170	2	60,518,	0,4047,
#Deleted in new
chr7	141972630	141973773	chr7:141972630-141973773	3	-	141972687	141973689	789624	1	1143,	0,
#Partially deleted in new
chr7	141995837	142106747	chr7:141995837-142106747	1	+	142005530	142105891	0	48	93,129,200,121,110,152,172,100,113,126,132,117,114,85,118,172,117,155,85,57,125,89,50,168,153,201,155,169,97,113,126,129,111,63,135,88,139,134,35,117,149,85,57,125,89,50,171,934,	0,9691,12668,23361,25136,25748,26430,29212,31277,31772,34524,34803,35842,36987,38424,38832,40331,40985,42693,44277,44884,51947,54397,54859,56456,56946,58916,59720,60162,60992,62365,63634,64018,64473,66730,67661,68546,69497,98782,98909,99727,100493,101755,103775,104964,106792,107431,109976,
#Partially deleted in new
chr7	141995878	142106747	chr7:141995878-142106747	3	+	142005530	142105891	789624	71	52,129,200,121,110,152,172,100,113,126,132,117,114,85,118,172,117,155,85,57,125,89,50,168,153,201,155,169,97,113,126,129,111,63,135,88,139,134,35,117,149,85,57,125,89,50,168,153,201,155,169,97,113,126,129,111,63,135,88,139,134,35,117,149,85,57,125,89,50,171,934,	0,9650,12627,23320,25095,25707,26389,29171,31236,31731,34483,34762,35801,36946,38383,38791,40290,40944,42652,44236,44843,51906,54356,54818,56415,56905,58875,59679,60121,60951,62324,63593,63977,64432,66689,67620,68505,69456,69709,69836,70694,71462,72768,75115,78206,80324,80780,82439,82929,84912,86163,86596,87422,88640,89954,90339,90776,96034,96642,97533,98485,98741,98868,99686,100452,101714,103734,104923,106751,107390,109935,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	141995878	142019300	chr7:141995878-142019300	0	+	142005530	142019300	789624	5	52,99,129,200,102,	0,8511,9650,12627,23320,
#Partially deleted in new
chr7	141995878	142106746	chr7:141995878-142106746	1	+	142005530	142105891	0	48	52,129,200,121,110,152,172,100,113,126,132,117,114,85,118,172,117,155,85,57,125,89,50,168,153,201,155,169,97,113,126,129,111,63,135,88,139,134,35,117,149,85,57,125,89,50,171,933,	0,9650,12627,23320,25095,25707,26389,29171,31236,31731,34483,34762,35801,36946,38383,38791,40290,40944,42652,44236,44843,51906,54356,54818,56415,56905,58875,59679,60121,60951,62324,63593,63977,64432,66689,67620,68505,69456,69709,69836,99686,100452,101714,103734,104923,106751,107390,109935,
#Deleted in new
chr7	142030226	142031794	chr7:142030226-142031794	0	+	142030226	142030226	8553170	3	267,117,115,	0,414,1453,
#Partially deleted in new
chr7	142038545	142040441	chr7:142038545-142040441	0	+	142038545	142038545	8553170	2	70,327,	0,1569,
#Partially deleted in new
chr7	142094773	142096010	chr7:142094773-142096010	0	+	142094773	142094773	8553170	2	90,446,	0,791,
#Partially deleted in new
chr7	142111748	142143983	chr7:142111748-142143983	1	+	142116873	142143900	789624	13	59,106,80,124,110,155,172,100,113,126,132,99,215,	0,5125,8553,19199,19769,20182,22232,24792,25684,26793,29053,29272,32020,
#Partially deleted in new
chr7	142111753	142222324	chr7:142111753-142222324	3	+	142116873	142222059	789624	48	54,106,80,124,110,155,172,100,113,126,132,99,114,85,118,172,117,155,85,57,125,89,50,168,156,219,155,169,97,113,126,129,108,63,135,85,139,134,35,117,149,85,57,125,89,50,171,2455,	0,5120,8548,19194,19764,20177,22227,24787,25679,26788,29048,29267,32015,33107,35702,42264,42975,46183,46494,47533,48380,49371,50201,53102,54344,55514,58321,59518,60344,60898,61475,63898,71512,73323,74235,75996,77613,84400,84811,84946,85646,85890,86385,86861,88126,96819,106607,108116,
#Partially deleted in new
chr7	142171169	142221288	chr7:142171169-142221288	0	+	142171169	142171169	8553170	22	271,97,113,126,129,108,63,135,85,139,134,35,117,149,85,57,125,89,87,50,171,1419,	0,928,1482,2059,4482,12096,13907,14819,16580,18197,24984,25395,25530,26230,26474,26969,27445,28710,37050,37403,47191,48700,
#Partially deleted in new
chr7	142240739	142247067	chr7:142240739-142247067	7	-	142240739	142240739	16724991	11	132,60,99,129,204,105,171,93,162,147,288,	0,1564,1758,2123,2563,2941,3237,4221,4550,5247,6040,
#Partially deleted in new
chr7	142240773	142243784	chr7:142240773-142243784	4	-	142240773	142240773	16724991	6	98,60,97,92,167,102,	0,1530,1724,2108,2550,2909,
#Partially deleted in new
chr7	142252142	142258058	chr7:142252142-142258058	3	-	142252220	142257707	789624	6	228,140,257,139,81,68,	0,329,2912,3392,5525,5848,
#Partially deleted in new
chr7	142252143	142258027	chr7:142252143-142258027	1	-	142252220	142257707	789624	5	227,140,257,139,360,	0,328,2911,3391,5524,
#Partially deleted in new
chr7	142265832	142271301	chr7:142265832-142271301	7	-	142265832	142265832	16724991	4	147,133,255,154,	0,858,3798,5315,
#Partially deleted in new
chr7	142268283	142272235	chr7:142268283-142272235	5	-	142268283	142268283	16724991	3	1602,154,283,	0,2864,3669,
#Partially deleted in new
chr7	142285749	142288869	chr7:142285749-142288869	3	+	142285749	142285749	8553170	2	100,284,	0,2836,
#Partially deleted in new
chr7	142287250	142289781	chr7:142287250-142289781	7	-	142287250	142287250	16724991	4	147,138,251,146,	0,687,1348,2385,
#Partially deleted in new
chr7	142287371	142291597	chr7:142287371-142291597	5	-	142287371	142287371	16724991	4	26,114,526,26,	0,566,952,4200,
#Partially deleted in new
chr7	142299176	142299460	chr7:142299176-142299460	7	+	142299176	142299176	16724991	1	284,	0,
#Partially deleted in new
chr7	142300923	142301432	chr7:142300923-142301432	3	+	142300997	142301432	789624	2	123,298,	0,211,
#Partially deleted in new
chr7	142308541	142309048	chr7:142308541-142309048	3	+	142308588	142309048	789624	2	96,295,	0,212,
#Partially deleted in new
chr7	142313183	142313666	chr7:142313183-142313666	3	+	142313212	142313666	789624	2	78,295,	0,188,
#Partially deleted in new
chr7	142320676	142321544	chr7:142320676-142321544	3	+	142321074	142321544	0	3	124,234,294,	0,213,574,
#Partially deleted in new
chr7	142328296	142328786	chr7:142328296-142328786	3	+	142328353	142328786	789624	2	106,295,	0,195,
#Partially deleted in new
chr7	142332181	142332701	chr7:142332181-142332701	3	+	142332214	142332701	789624	2	82,298,	0,222,
#Partially deleted in new
chr7	142345420	142345985	chr7:142345420-142345985	3	+	142345531	142345985	789624	2	160,295,	0,270,
#Partially deleted in new
chr7	142349151	142349664	chr7:142349151-142349664	3	+	142349231	142349664	789624	2	129,295,	0,218,
#Partially deleted in new
chr7	142352818	142353358	chr7:142352818-142353358	3	+	142352865	142353358	789624	2	96,298,	0,242,
#Partially deleted in new
chr7	142358638	142358917	chr7:142358638-142358917	7	+	142358638	142358638	16724991	1	279,	0,
#Partially deleted in new
chr7	142372639	142372912	chr7:142372639-142372912	7	+	142372639	142372639	16724991	1	273,	0,
#Partially deleted in new
chr7	142380805	142381261	chr7:142380805-142381261	3	+	142380826	142381261	789624	2	70,295,	0,161,
#Partially deleted in new
chr7	142384328	142384841	chr7:142384328-142384841	3	+	142384378	142384841	789624	2	99,298,	0,215,
#Partially deleted in new
chr7	142386377	142386647	chr7:142386377-142386647	7	+	142386377	142386377	16724991	1	270,	0,
#Partially deleted in new
chr7	142389201	142389668	chr7:142389201-142389668	3	+	142389201	142389668	789624	2	49,294,	0,173,
#Partially deleted in new
chr7	142391890	142392412	chr7:142391890-142392412	3	+	142391937	142392412	789624	2	96,294,	0,228,
#Partially deleted in new
chr7	142399859	142400377	chr7:142399859-142400377	3	+	142399927	142400377	789624	2	117,295,	0,223,
#Partially deleted in new
chr7	142407671	142408136	chr7:142407671-142408136	3	+	142407688	142408136	789624	2	66,298,	0,167,
#Deleted in new
chr7	142415223	142415666	chr7:142415223-142415666	7	+	142415223	142415223	16724991	2	46,298,	0,145,
#Deleted in new
chr7	142424964	142425465	chr7:142424964-142425465	3	+	142425015	142425465	789624	2	100,295,	0,206,
#Deleted in new
chr7	142433894	142434394	chr7:142433894-142434394	3	+	142433894	142433894	8553170	2	110,298,	0,202,
#Deleted in new
chr7	142440882	142441325	chr7:142440882-142441325	7	+	142440882	142440882	16724991	2	46,298,	0,145,
#Deleted in new
chr7	142450946	142451448	chr7:142450946-142451448	3	+	142451012	142451448	0	2	115,295,	0,207,
#Deleted in new
chr7	142455173	142455635	chr7:142455173-142455635	3	+	142455173	142455635	789624	2	49,298,	0,164,
#Deleted in new
chr7	142462915	142463581	chr7:142462915-142463581	3	+	142463116	142463581	789624	2	250,294,	0,372,
#Deleted in new
chr7	142469536	142470013	chr7:142469536-142470013	3	+	142469580	142470013	789624	2	93,295,	0,182,
#Deleted in new
chr7	142474095	142474567	chr7:142474095-142474567	7	+	142474095	142474095	16724991	2	49,296,	0,176,
#Deleted in new
chr7	142482547	142483019	chr7:142482547-142483019	3	+	142482554	142483019	789624	2	56,294,	0,178,
#Deleted in new
chr7	142487862	142488295	chr7:142487862-142488295	3	+	142487862	142488295	789624	2	49,295,	0,138,
#Deleted in new
chr7	142492131	142492673	chr7:142492131-142492673	3	+	142492176	142492673	789624	2	94,298,	0,244,
#Deleted in new
chr7	142500027	142500534	chr7:142500027-142500534	3	+	142500068	142500534	789624	2	90,294,	0,213,
#Deleted in new
chr7	142507381	142507810	chr7:142507381-142507810	3	+	142507381	142507810	789624	2	49,292,	0,137,
#Deleted in new
chr7	142511625	142512127	chr7:142511625-142512127	3	+	142511625	142512127	789624	2	49,298,	0,204,
#Deleted in new
chr7	142520089	142520556	chr7:142520089-142520556	3	+	142520089	142520556	789624	2	49,294,	0,173,
#Deleted in new
chr7	142529289	142529762	chr7:142529289-142529762	3	+	142529289	142529762	789624	2	49,298,	0,175,
#Deleted in new
chr7	142535808	142536292	chr7:142535808-142536292	3	+	142535808	142536292	789624	2	79,295,	0,189,
#Deleted in new
chr7	142544211	142544685	chr7:142544211-142544685	3	+	142544235	142544685	789624	2	73,295,	0,179,
#Deleted in new
chr7	142554835	142555318	chr7:142554835-142555318	3	+	142554880	142555318	789624	2	94,298,	0,185,
#Deleted in new
chr7	142560422	142560931	chr7:142560422-142560931	3	+	142560484	142560931	789624	2	111,298,	0,211,
#Deleted in new
chr7	142563739	142564245	chr7:142563739-142564245	3	+	142563798	142564245	0	2	108,298,	0,208,
#Deleted in new
chr7	142580916	142581427	chr7:142580916-142581427	3	+	142580980	142581427	789624	2	113,298,	0,213,
#Deleted in new
chr7	142587867	142588359	chr7:142587867-142588359	3	+	142587926	142588359	789624	2	108,298,	0,194,
#Deleted in new
chr7	142592927	142593473	chr7:142592927-142593473	3	+	142593004	142593473	789624	2	126,295,	0,251,
#Deleted in new
chr7	142598015	142598469	chr7:142598015-142598469	3	+	142598015	142598469	789624	2	49,298,	0,156,
#Partially deleted in new
chr7	142601627	142602360	chr7:142601627-142602360	3	+	142601627	142602360	789624	2	49,295,	0,438,
#Deleted in new
chr7	142615715	142616415	chr7:142615715-142616415	3	+	142615796	142616415	789624	2	130,298,	0,402,
#Deleted in new
chr7	142618848	142619532	chr7:142618848-142619532	3	+	142619056	142619532	0	2	257,295,	0,389,
#Deleted in new
chr7	142626648	142627399	chr7:142626648-142627399	3	+	142626726	142627399	789624	2	109,304,	0,447,
#Deleted in new
chr7	142636923	142637384	chr7:142636923-142637384	7	+	142636923	142636923	16724991	2	50,298,	0,163,
#Deleted in new
chr7	142641745	142642196	chr7:142641745-142642196	7	+	142641745	142641745	16724991	2	49,288,	0,163,
#Deleted in new
chr7	142645960	142646467	chr7:142645960-142646467	3	+	142645960	142646467	789624	2	49,298,	0,209,
#Deleted in new
chr7	142656700	142657213	chr7:142656700-142657213	3	+	142656736	142657213	789624	2	85,296,	0,217,
#Deleted in new
chr7	142666271	142667718	chr7:142666271-142667718	3	+	142667230	142667305	789624	1	1447,	0,
#Deleted in new
chr7	142670739	142671244	chr7:142670739-142671244	3	+	142670776	142671244	789624	2	86,295,	0,210,
#Deleted in new
chr7	142681414	142681869	chr7:142681414-142681869	7	+	142681414	142681414	16724991	2	48,268,	0,187,
#Deleted in new
chr7	142695698	142696183	chr7:142695698-142696183	7	+	142695698	142695698	16724991	2	49,295,	0,190,
#Partially deleted in new
chr7	142711383	142711924	chr7:142711383-142711924	7	+	142711383	142711383	16724991	2	49,359,	0,182,
#Partially deleted in new
chr7	142715345	142715861	chr7:142715345-142715861	3	+	142715388	142715861	789624	2	92,295,	0,221,
#Deleted in new
chr7	142720659	142721160	chr7:142720659-142721160	3	+	142720679	142721160	0	2	69,295,	0,206,
#Deleted in new
chr7	142722357	142722764	chr7:142722357-142722764	7	+	142722357	142722357	16724991	1	407,	0,
#Deleted in new
chr7	142740205	142740894	chr7:142740205-142740894	3	+	142740272	142740894	789624	2	101,301,	0,388,
#Partially deleted in new
chr7	142749467	142753020	chr7:142749467-142753020	1	+	142749484	142753020	789624	6	57,160,42,254,137,153,	0,1087,1601,2306,2963,3400,
#Partially deleted in new
chr7	142749467	142753076	chr7:142749467-142753076	1	+	142749484	142753020	789624	6	57,160,33,191,137,209,	0,1087,2306,2369,2963,3400,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	142749471	142752008	chr7:142749471-142752008	0	+	142749471	142749471	8553170	2	53,1380,	0,1157,
#Partially deleted in new
chr7	142749478	142753070	chr7:142749478-142753070	3	+	142749484	142753020	0	5	46,160,254,137,203,	0,1076,2295,2952,3389,
#Deleted in new
chr7	142749480	142751091	chr7:142749480-142751091	0	+	142749480	142749480	8553170	2	44,537,	0,1074,
#Partially deleted in new
chr7	142750664	142753069	chr7:142750664-142753069	0	+	142750664	142752872	789624	4	50,254,120,202,	0,1109,1766,2203,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	142751109	142753072	chr7:142751109-142753072	0	+	142751109	142751109	8553170	3	918,137,205,	0,1321,1758,
#Partially deleted in new
chr7	142760397	142774564	chr7:142760397-142774564	1	+	142760414	142774508	789624	5	57,160,254,137,209,	0,11651,12868,13521,13958,
#Partially deleted in new
chr7	142760414	142763943	chr7:142760414-142763943	7	+	142760414	142760414	16724991	5	40,160,254,137,151,	0,1060,2279,2940,3378,
#Deleted in new
chr7	142770966	142774558	chr7:142770966-142774558	1	+	142770982	142774508	789624	7	56,160,42,166,43,137,203,	0,1082,1595,2299,2510,2952,3389,
#Deleted in new
chr7	142770966	142774558	chr7:142770966-142774558	1	+	142770982	142774508	789624	6	56,160,42,254,137,203,	0,1082,1595,2299,2952,3389,
#Deleted in new
chr7	142770969	142772552	chr7:142770969-142772552	0	+	142770969	142770969	8553170	2	53,504,	0,1079,
#Deleted in new
chr7	142770982	142774559	chr7:142770982-142774559	3	+	142770982	142774508	789624	5	40,160,254,137,204,	0,1066,2283,2936,3373,
#Deleted in new
chr7	142772158	142774557	chr7:142772158-142774557	0	+	142772158	142772158	8553170	4	50,254,120,202,	0,1107,1760,2197,
#Deleted in new
chr7	142778641	142779537	chr7:142778641-142779537	7	-	142778641	142778641	16724991	1	896,	0,
#Deleted in new
chr7	142786212	142786224	chr7:142786212-142786224	3	+	142786212	142786224	8553170	1	12,	0,
#Deleted in new
chr7	142786879	142786927	chr7:142786879-142786927	3	+	142786879	142786927	789624	1	48,	0,
#Deleted in new
chr7	142787016	142787064	chr7:142787016-142787064	3	+	142787016	142787064	789624	1	48,	0,
#Deleted in new
chr7	142787629	142787679	chr7:142787629-142787679	3	+	142787629	142787679	789624	1	50,	0,
#Deleted in new
chr7	142788224	142788275	chr7:142788224-142788275	3	+	142788224	142788275	789624	1	51,	0,
#Deleted in new
chr7	142788497	142788547	chr7:142788497-142788547	3	+	142788497	142788547	789624	1	50,	0,
#Deleted in new
chr7	142788987	142789040	chr7:142788987-142789040	3	+	142788987	142789040	789624	1	53,	0,
#Deleted in new
chr7	142791693	142793368	chr7:142791693-142793368	3	+	142791693	142793141	8553170	4	387,18,107,248,	0,828,998,1427,
#Deleted in new
chr7	142796364	142796414	chr7:142796364-142796414	3	+	142796364	142796414	789624	1	50,	0,
#Deleted in new
chr7	142796559	142796610	chr7:142796559-142796610	3	+	142796559	142796610	789624	1	51,	0,
#Deleted in new
chr7	142796696	142796742	chr7:142796696-142796742	3	+	142796696	142796742	789624	1	46,	0,
#Deleted in new
chr7	142796846	142796895	chr7:142796846-142796895	3	+	142796846	142796895	789624	1	49,	0,
#Deleted in new
chr7	142796997	142797047	chr7:142796997-142797047	3	+	142796997	142797047	789624	1	50,	0,
#Deleted in new
chr7	142797118	142797166	chr7:142797118-142797166	3	+	142797118	142797166	789624	1	48,	0,
#Deleted in new
chr7	142797238	142797291	chr7:142797238-142797291	3	+	142797238	142797291	789624	1	53,	0,
#Deleted in new
chr7	142797455	142797502	chr7:142797455-142797502	3	+	142797455	142797502	789624	1	47,	0,
#Deleted in new
chr7	142801040	142802748	chr7:142801040-142802748	3	+	142801040	142802529	8553170	4	387,18,107,246,	0,903,1064,1462,
#Deleted in new
chr7	142812585	142813399	chr7:142812585-142813399	3	-	142812585	142813287	789624	2	292,155,	0,659,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr7	142855060	142871094	chr7:142855060-142871094	3	+	142863227	142870904	789624	20	325,135,117,78,197,65,784,156,357,125,163,115,53,120,248,174,150,194,156,299,	0,5991,6956,7695,8070,8570,8905,10414,10899,11420,11845,12547,12936,13180,13431,13913,14756,15153,15469,15735,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	142855103	142862788	chr7:142855103-142862788	0	+	142855103	142855103	8553170	4	282,135,134,33,	0,5948,6896,7652,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr7	142855123	142871094	chr7:142855123-142871094	0	+	142855123	142855123	8553170	18	262,135,117,572,65,784,156,646,163,115,53,120,248,174,150,194,156,299,	0,5928,6893,7632,8507,8842,10351,10836,11782,12484,12873,13117,13368,13850,14693,15090,15406,15672,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr7	142855142	142871087	chr7:142855142-142871087	0	+	142863227	142864018	789624	19	243,135,117,78,201,784,156,357,125,163,115,53,120,248,174,150,194,156,292,	0,5909,6874,7613,7984,8823,10332,10817,11338,11763,12465,12854,13098,13349,13831,14674,15071,15387,15653,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr7	142862034	142871087	chr7:142862034-142871087	0	+	142863227	142864623	789624	19	99,78,201,65,297,216,156,357,125,128,115,53,120,248,174,150,194,156,292,	0,721,1092,1596,1931,2499,3440,3925,4446,4906,5573,5962,6206,6457,6939,7782,8179,8495,8761,
#Partially deleted in new
chr7	142862755	142871092	chr7:142862755-142871092	1	+	142864679	142870904	789624	16	78,197,784,156,357,125,163,115,53,120,248,174,150,194,156,297,	0,375,1210,2719,3204,3725,4150,4852,5241,5485,5736,6218,7061,7458,7774,8040,
#Partially deleted in new
chr7	142862755	142871092	chr7:142862755-142871092	1	+	142863227	142870904	789624	17	78,201,65,784,156,357,125,163,115,53,120,248,174,150,194,156,297,	0,371,875,1210,2719,3204,3725,4150,4852,5241,5485,5736,6218,7061,7458,7774,8040,
#Partially deleted in new
chr7	142867281	142871094	chr7:142867281-142871094	0	+	142867281	142867281	8553170	7	1079,248,174,150,194,156,299,	0,1210,1692,2535,2932,3248,3514,
#Deleted in new
chr7	142869771	142870615	chr7:142869771-142870615	0	+	142869771	142869771	8553170	3	195,194,86,	0,442,758,
#Deleted in new
chr7	142869897	142871092	chr7:142869897-142871092	0	+	142869897	142869897	8553170	4	69,194,95,297,	0,316,693,898,
#Deleted in new
chr7	142869930	142871093	chr7:142869930-142871093	0	+	142869930	142870904	789624	3	36,194,298,	0,283,865,
#Partially deleted in new
chr7	142871202	142885762	chr7:142871202-142885762	1	-	142871706	142885636	789624	15	787,107,269,67,166,77,87,213,147,176,99,138,123,98,374,	0,1169,2245,2873,3288,3701,3875,4265,4555,5205,5536,5939,6448,6726,14186,
#Deleted in new
chr7	142871208	142876540	chr7:142871208-142876540	0	-	142871208	142871208	8553170	9	781,107,695,166,77,87,213,147,133,	0,1163,2239,3282,3695,3869,4259,4549,5199,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	142871212	142885389	chr7:142871212-142885389	0	-	142871212	142871212	8553170	12	777,107,269,67,166,77,87,213,147,176,99,8248,	0,1159,2235,2863,3278,3691,3865,4255,4545,5195,5526,5929,
#Partially deleted in new
chr7	142871706	142885636	chr7:142871706-142885636	3	-	142871706	142885636	0	15	283,107,269,67,166,77,87,213,147,176,99,138,123,98,248,	0,665,1741,2369,2784,3197,3371,3761,4051,4701,5032,5435,5944,6222,13682,
#Deleted in new
chr7	142873813	142876444	chr7:142873813-142876444	0	-	142873813	142873813	8553170	5	329,490,87,213,687,	0,677,1264,1654,1944,
#Partially deleted in new
chr7	142874097	142885745	chr7:142874097-142885745	0	-	142874097	142875155	789624	6	45,166,77,87,58,99,	0,393,806,980,1370,11549,
#Partially deleted in new
chr7	142875835	142892743	chr7:142875835-142892743	3	+	142875835	142875835	8553170	2	99,164,	0,16744,
#Deleted in new
chr7	142876113	142876808	chr7:142876113-142876808	0	-	142876113	142876113	8553170	2	470,70,	0,625,
#Deleted in new
chr7	142876823	142877955	chr7:142876823-142877955	0	-	142876823	142876823	8553170	3	14,632,27,	0,318,1105,
#Deleted in new
chr7	142877239	142877979	chr7:142877239-142877979	0	-	142877239	142877780	789624	3	40,156,51,	0,411,689,
#Partially deleted in new
chr7	142908100	142933808	chr7:142908100-142933808	3	-	142908513	142933459	789624	15	708,107,269,67,166,77,87,213,147,176,99,138,123,98,477,	0,1389,4381,6539,6780,7206,7381,17428,19987,20590,20921,21327,21957,22248,25231,
#Partially deleted in new
chr7	142908513	142933441	chr7:142908513-142933441	0	-	142908513	142933441	789624	14	295,107,269,67,166,77,87,213,176,99,138,123,98,110,	0,976,3968,6126,6367,6793,6968,17015,20177,20508,20914,21544,21835,24818,
#Partially deleted in new
chr7	142924794	142933723	chr7:142924794-142933723	1	-	142925504	142933459	789624	8	947,147,176,99,138,123,98,392,	0,3293,3896,4227,4633,5263,5554,8537,
#Deleted in new
chr7	142939342	142940844	chr7:142939342-142940844	0	+	142939342	142940587	8553170	3	157,67,493,	0,345,1009,
#Deleted in new
chr7	142939505	142940868	chr7:142939505-142940868	3	+	142939546	142940587	789624	2	249,517,	0,846,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr7	142941113	142962681	chr7:142941113-142962681	3	-	142941251	142962206	789624	19	300,96,170,68,111,101,78,99,111,130,149,189,63,147,125,177,142,78,478,	0,1320,1761,2162,2372,2669,3209,3529,5093,11395,12694,13070,13351,16713,17190,19814,20246,20681,21090,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	142942065	142943839	chr7:142942065-142943839	0	-	142942065	142942065	8553170	4	464,73,111,57,	0,809,1420,1717,
#Deleted in new
chr7	142942458	142943154	chr7:142942458-142943154	0	-	142942458	142942458	8553170	2	71,280,	0,416,
#Deleted in new
chr7	142943548	142944916	chr7:142943548-142944916	0	-	142943548	142943548	8553170	4	48,101,78,274,	0,234,774,1094,
#Partially deleted in new
chr7	142946073	142962324	chr7:142946073-142962324	0	-	142946073	142946073	8553170	11	535,130,149,189,63,147,125,177,142,78,121,	0,6435,7734,8110,8391,11753,12230,14854,15286,15721,16130,
#Partially deleted in new
chr7	142954285	142958427	chr7:142954285-142958427	0	-	142954285	142954285	8553170	4	87,59,147,124,	0,179,3541,4018,
#Partially deleted in new
chr7	142954343	142962301	chr7:142954343-142962301	0	-	142954343	142962206	789624	6	29,125,177,142,78,98,	0,3960,6584,7016,7451,7860,
#Partially deleted in new
chr7	142957829	142962327	chr7:142957829-142962327	0	-	142961434	142962206	789624	6	144,125,177,142,74,124,	0,474,3098,3530,3965,4374,
#Partially deleted in new
chr7	142958303	142962206	chr7:142958303-142962206	0	-	142958303	142961818	789624	5	125,177,142,78,92,	0,2624,3056,3491,3811,
#Deleted in new
chr7	143026157	143027195	chr7:143026157-143027195	3	-	143026199	143027132	789624	1	1038,	0,
#Deleted in new
chr7	143047212	143047580	chr7:143047212-143047580	7	-	143047212	143047212	16724991	2	109,172,	0,196,
#Deleted in new
chr7	143052319	143053347	chr7:143052319-143053347	3	+	143052340	143053282	789624	1	1028,	0,
#Partially deleted in new
chr7	143062329	143063585	chr7:143062329-143063585	7	-	143062329	143062329	16724991	2	1057,41,	0,1215,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	143062329	143063429	chr7:143062329-143063429	5	-	143062329	143062329	16724991	1	1100,	0,
#Partially deleted in new
chr7	143132076	143139746	chr7:143132076-143139746	3	+	143132116	143139642	0	4	135,106,115,229,	0,3117,6998,7441,
#Partially deleted in new
chr7	143183418	143184435	chr7:143183418-143184435	3	+	143183418	143184435	0	1	1017,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	143220467	143222267	chr7:143220467-143222267	3	-	143220467	143220467	8553170	1	1800,	0,
#Deleted in new
chr7	143222036	143223079	chr7:143222036-143223079	3	+	143222078	143223050	789624	1	1043,	0,
#Deleted in new
chr7	143224041	143224234	chr7:143224041-143224234	3	-	143224041	143224041	8553170	1	193,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	143255263	143286663	chr7:143255263-143286663	3	-	143255263	143255263	8553170	4	158,121,195,118,	0,30454,30713,31282,
#Partially deleted in new
chr7	143263428	143268995	chr7:143263428-143268995	1	+	143263513	143268837	0	7	157,82,129,101,117,94,208,	0,657,1119,1563,4188,4662,5359,
#Partially deleted in new
chr7	143263440	143269062	chr7:143263440-143269062	1	+	143263513	143268837	0	7	145,82,101,36,117,94,275,	0,645,1551,1820,4176,4650,5347,
#Partially deleted in new
chr7	143263442	143269129	chr7:143263442-143269129	3	+	143263513	143268837	0	8	143,82,129,101,36,117,94,342,	0,643,1105,1549,1818,4174,4648,5345,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	143263450	143270754	chr7:143263450-143270754	0	+	143263513	143268823	789624	8	135,82,129,101,36,117,156,1463,	0,635,1097,1541,1810,4166,5337,5841,
#Partially deleted in new
chr7	143263455	143269115	chr7:143263455-143269115	1	+	143263513	143268837	0	7	130,82,129,305,117,94,328,	0,630,1092,1536,4161,4635,5332,
#Partially deleted in new
chr7	143263470	143264682	chr7:143263470-143264682	0	+	143263470	143263470	8553170	2	697,135,	0,1077,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	143263486	143270854	chr7:143263486-143270854	0	+	143263486	143263486	8553170	8	99,82,545,36,117,94,156,1563,	0,599,1061,1774,4130,4604,5301,5805,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	143263495	143264870	chr7:143263495-143264870	0	+	143263495	143263495	8553170	2	90,785,	0,590,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	143279956	143287296	chr7:143279956-143287296	3	+	143285957	143286829	789624	3	91,262,873,	0,5984,6467,
#Deleted in new
chr7	143284946	143287070	chr7:143284946-143287070	0	+	143284946	143284946	8553170	2	28,647,	0,1477,
#Deleted in new
chr7	143284949	143288048	chr7:143284949-143288048	1	+	143285957	143286829	789624	3	496,262,1625,	0,991,1474,
#Deleted in new
chr7	143284950	143287296	chr7:143284950-143287296	1	+	143285957	143286829	789624	4	24,98,262,873,	0,397,990,1473,
#Deleted in new
chr7	143284950	143286862	chr7:143284950-143286862	0	+	143284950	143284950	8553170	3	24,101,439,	0,394,1473,
#Deleted in new
chr7	143284953	143288047	chr7:143284953-143288047	1	+	143285957	143286829	789624	3	21,262,1624,	0,987,1470,
#Deleted in new
chr7	143284956	143288048	chr7:143284956-143288048	1	+	143285957	143286829	789624	5	42,98,87,262,1625,	0,391,597,984,1467,
#Deleted in new
chr7	143284968	143286456	chr7:143284968-143286456	0	+	143284968	143284968	8553170	2	477,33,	0,1455,
#Deleted in new
chr7	143285346	143288048	chr7:143285346-143288048	0	+	143285346	143285346	789624	2	99,1625,	0,1077,
#Deleted in new
chr7	143285719	143287380	chr7:143285719-143287380	1	-	143285719	143285719	8553170	2	119,338,	0,1323,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	143288214	143307696	chr7:143288214-143307696	3	+	143288455	143305071	0	11	315,151,168,82,95,177,129,91,150,110,2757,	0,3325,4085,4402,6015,6382,11708,11989,15569,16459,16725,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	143288214	143307695	chr7:143288214-143307695	1	+	143288455	143294299	789624	10	315,151,82,45,177,129,91,150,110,2756,	0,3325,4085,6065,6382,11708,11989,15569,16459,16725,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	143288394	143293226	chr7:143288394-143293226	1	+	143288455	143293187	789624	5	135,151,168,82,80,	0,3145,3905,4222,4752,
#Partially deleted in new
chr7	143288450	143305071	chr7:143288450-143305071	0	+	143288455	143294299	789624	10	79,151,82,45,177,129,91,150,110,132,	0,3089,3849,5829,6146,11472,11753,15333,16223,16489,
#Partially deleted in new
chr7	143289587	143305822	chr7:143289587-143305822	0	+	143289587	143289587	8553170	12	69,151,168,82,95,177,129,91,61,150,110,883,	0,1952,2712,3029,4642,5009,10335,10616,10792,14196,15086,15352,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	143290614	143290910	chr7:143290614-143290910	3	+	143290614	143290614	8553170	1	296,	0,
#Partially deleted in new
chr7	143291617	143294481	chr7:143291617-143294481	0	+	143291617	143291617	8553170	4	73,168,82,252,	0,682,999,2612,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	143294603	143306569	chr7:143294603-143306569	0	+	143294603	143294603	8553170	5	170,129,3730,110,1630,	0,5319,5600,10070,10336,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	143298515	143298814	chr7:143298515-143298814	3	+	143298515	143298515	8553170	1	299,	0,
#Deleted in new
chr7	143312683	143313061	chr7:143312683-143313061	7	-	143312683	143312683	16724991	1	378,	0,
#Partially deleted in new
chr7	143316125	143352083	chr7:143316125-143352083	3	+	143316212	143351965	789624	23	267,121,132,129,134,78,79,126,85,102,85,150,70,111,214,134,242,112,80,39,105,87,490,	0,3629,4538,5239,5589,7183,8288,14646,15106,15425,16293,16598,23127,23385,25803,26246,29395,30014,30453,30785,34246,34442,35468,
#Partially deleted in new
chr7	143316125	143330897	chr7:143316125-143330897	0	+	143316212	143330897	8553170	8	267,121,132,129,134,78,79,126,	0,3629,4538,5239,5589,7183,7693,14646,
#Partially deleted in new
chr7	143321473	143330895	chr7:143321473-143330895	0	+	143321473	143323838	789624	6	20,134,55,79,79,124,	0,241,2099,2345,2940,9298,
#Partially deleted in new
chr7	143321473	143330895	chr7:143321473-143330895	0	+	143321473	143323838	789624	7	20,134,78,55,79,79,124,	0,241,1835,2099,2345,2940,9298,
#Partially deleted in new
chr7	143321473	143330895	chr7:143321473-143330895	0	+	143321473	143321473	8553170	3	20,134,124,	0,241,9298,
#Partially deleted in new
chr7	143353399	143362752	chr7:143353399-143362752	3	-	143356549	143362603	789624	7	3623,144,198,94,36,110,177,	0,3880,5427,5926,6332,6640,9176,
#Partially deleted in new
chr7	143353400	143362725	chr7:143353400-143362725	1	-	143356549	143360093	789624	7	3622,144,198,94,36,110,91,	0,3879,5426,5925,6331,6639,9234,
#Partially deleted in new
chr7	143353400	143362693	chr7:143353400-143362693	1	-	143356549	143362603	789624	6	3622,144,198,94,110,118,	0,3879,5426,5925,6639,9175,
#Partially deleted in new
chr7	143353400	143359757	chr7:143353400-143359757	0	-	143359620	143359757	789624	6	3622,144,198,94,80,26,	0,3879,5426,5925,6149,6331,
#Partially deleted in new
chr7	143353401	143361802	chr7:143353401-143361802	1	-	143356549	143360093	789624	6	3621,144,198,94,36,1763,	0,3878,5425,5924,6330,6638,
#Partially deleted in new
chr7	143353821	143362055	chr7:143353821-143362055	1	-	143356549	143360093	789624	7	3201,144,198,94,36,110,40,	0,3458,5005,5504,5910,6218,8194,
#Partially deleted in new
chr7	143356970	143362632	chr7:143356970-143362632	0	-	143359006	143362603	789624	6	52,144,198,36,110,57,	0,309,1856,2761,3069,5605,
#Partially deleted in new
chr7	143357280	143362080	chr7:143357280-143362080	0	-	143359473	143360093	789624	6	143,182,193,36,110,65,	0,1562,2045,2451,2759,4735,
#Deleted in new
chr7	143358886	143362770	chr7:143358886-143362770	0	-	143358886	143358886	8553170	4	138,442,110,195,	0,439,1153,3689,
#Deleted in new
chr7	143363898	143364229	chr7:143363898-143364229	3	+	143363898	143363898	8553170	1	331,	0,
#Deleted in new
chr7	143379691	143380495	chr7:143379691-143380495	3	-	143379691	143379691	8553170	2	418,230,	0,574,
#Partially deleted in new
chr7	143381079	143391111	chr7:143381079-143391111	3	+	143381571	143390682	789624	10	330,223,200,93,522,121,170,179,121,534,	0,477,1168,1513,1721,7139,7409,7687,8777,9498,
#Deleted in new
chr7	143381294	143382925	chr7:143381294-143382925	0	+	143381294	143382925	789624	4	115,200,93,125,	0,953,1298,1506,
#Deleted in new
chr7	143381359	143383235	chr7:143381359-143383235	0	+	143381359	143381359	8553170	4	50,223,438,435,	0,197,888,1441,
#Deleted in new
chr7	143381360	143382676	chr7:143381360-143382676	0	+	143381571	143382676	789624	3	419,200,84,	0,887,1232,
#Partially deleted in new
chr7	143381574	143391109	chr7:143381574-143391109	0	+	143381574	143390682	789624	8	205,200,522,121,170,179,121,532,	0,673,1226,6644,6914,7192,8282,9003,
#Partially deleted in new
chr7	143381906	143391109	chr7:143381906-143391109	1	+	143382655	143390682	789624	9	185,200,93,522,121,170,179,121,532,	0,341,686,894,6312,6582,6860,7950,8671,
#Deleted in new
chr7	143382027	143383240	chr7:143382027-143383240	0	+	143382027	143382027	8553170	2	64,440,	0,773,
#Deleted in new
chr7	143382685	143382800	chr7:143382685-143382800	3	+	143382685	143382685	5263520	1	115,	0,
#Partially deleted in new
chr7	143382849	143388500	chr7:143382849-143388500	0	+	143382849	143388249	789624	4	473,26,121,12,	0,4912,5369,5639,
#Partially deleted in new
chr7	143382999	143388896	chr7:143382999-143388896	0	+	143384178	143388896	789624	6	323,156,26,121,170,130,	0,1090,4762,5219,5489,5767,
#Deleted in new
chr7	143387888	143388597	chr7:143387888-143388597	0	+	143387888	143387888	8553170	2	451,109,	0,600,
#Deleted in new
chr7	143390288	143391391	chr7:143390288-143391391	0	-	143390288	143390288	8553170	2	357,294,	0,809,
#Partially deleted in new
chr7	143391111	143408892	chr7:143391111-143408892	3	-	143391456	143408805	0	18	424,156,194,150,207,62,186,126,59,97,151,128,345,156,403,282,68,169,	0,508,2559,3082,3696,4009,4207,5273,6192,6449,6808,7209,7489,8146,8539,10212,16499,17612,
#Partially deleted in new
chr7	143391410	143408805	chr7:143391410-143408805	0	-	143391410	143391410	8553170	16	125,156,194,150,62,186,126,59,97,151,625,156,403,282,68,82,	0,209,2260,2783,3710,3908,4974,5893,6150,6509,6910,7847,8240,9913,16200,17313,
#Partially deleted in new
chr7	143394209	143395601	chr7:143394209-143395601	0	-	143394209	143394209	8553170	4	134,207,62,283,	0,598,911,1109,
#Deleted in new
chr7	143394806	143396681	chr7:143394806-143396681	0	-	143394806	143394806	8553170	4	208,62,186,297,	0,314,512,1578,
#Deleted in new
chr7	143397480	143398712	chr7:143397480-143398712	0	-	143397480	143397480	8553170	4	177,151,128,112,	0,439,840,1120,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	143400825	143407650	chr7:143400825-143407650	0	-	143400825	143400825	8553170	2	780,40,	0,6785,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	143407812	143523449	chr7:143407812-143523449	3	+	143407812	143407812	789624	5	74,132,57,236,4519,	0,7255,96961,110469,111118,
#Partially deleted in new
chr7	143407832	143415830	chr7:143407832-143415830	0	+	143407832	143407832	8553170	3	58,132,294,	0,7235,7704,
#Deleted in new
chr7	143437033	143437973	chr7:143437033-143437973	7	+	143437033	143437033	16724991	1	940,	0,
#Deleted in new
chr7	143443452	143444409	chr7:143443452-143444409	3	+	143443452	143444409	789624	1	957,	0,
#Deleted in new
chr7	143477872	143478796	chr7:143477872-143478796	3	+	143477872	143478796	789624	1	924,	0,
#Deleted in new
chr7	143488461	143489402	chr7:143488461-143489402	7	-	143488461	143488461	16724991	1	941,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	143509255	143519469	chr7:143509255-143519469	3	-	143510932	143511911	8553170	3	2678,145,75,	0,4484,10139,
#Partially deleted in new
chr7	143532748	143533164	chr7:143532748-143533164	7	-	143532748	143532748	16724991	1	416,	0,
#Partially deleted in new
chr7	143545185	143546735	chr7:143545185-143546735	7	-	143545185	143545185	16724991	2	1124,93,	0,1457,
#Deleted in new
chr7	143571800	143574387	chr7:143571800-143574387	3	+	143571817	143574151	789624	1	2587,	0,
#Deleted in new
chr7	143574745	143574848	chr7:143574745-143574848	3	+	143574745	143574745	8553170	1	103,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	143578906	143579072	chr7:143578906-143579072	7	+	143578906	143578906	16724991	1	166,	0,
#Partially deleted in new
chr7	143598038	143604839	chr7:143598038-143604839	7	+	143598038	143598038	16724991	7	995,98,214,240,338,93,255,	0,1283,2488,3349,4735,5521,6546,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	143620942	143645675	chr7:143620942-143645675	7	+	143620942	143620942	16724991	2	78,1812,	0,22921,
#Partially deleted in new
chr7	143620951	143725082	chr7:143620951-143725082	1	+	143702994	143724730	789624	7	69,637,992,98,214,240,723,	0,82029,98731,100329,101706,102259,103408,
#Partially deleted in new
chr7	143620951	143644128	chr7:143620951-143644128	4	+	143620951	143620951	16724991	3	69,637,265,	0,2810,22912,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	143621451	143645672	chr7:143621451-143645672	4	+	143621451	143621451	16724991	3	52,637,1809,	0,2310,22412,
#Partially deleted in new
chr7	143623761	143624398	chr7:143623761-143624398	5	+	143623761	143623761	16724991	1	637,	0,
#Partially deleted in new
chr7	143639229	143647646	chr7:143639229-143647646	3	-	143639669	143647646	789624	6	695,338,240,214,98,992,	0,3410,4657,5236,6721,7425,
#Partially deleted in new
chr7	143702980	143725081	chr7:143702980-143725081	1	+	143702994	143724730	789624	6	637,992,98,214,240,722,	0,16702,18300,19677,20230,21379,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	143702980	143730409	chr7:143702980-143730409	1	+	143702994	143727667	789624	7	637,992,98,214,240,338,2997,	0,16702,18300,19677,20230,21379,24432,
#Partially deleted in new
chr7	143702980	143725083	chr7:143702980-143725083	1	+	143702994	143724730	789624	6	637,992,98,214,240,724,	0,16702,18300,19677,20230,21379,
#Partially deleted in new
chr7	143719682	143725081	chr7:143719682-143725081	1	+	143719902	143724730	789624	5	992,98,214,240,722,	0,1598,2975,3528,4677,
#Deleted in new
chr7	143754627	143754730	chr7:143754627-143754730	3	-	143754627	143754627	8553170	1	103,	0,
#Deleted in new
chr7	143755088	143757696	chr7:143755088-143757696	3	-	143755324	143757658	789624	1	2608,	0,
#Partially deleted in new
chr7	143782666	143784284	chr7:143782666-143784284	7	+	143782666	143782666	16724991	2	145,1135,	0,483,
#Deleted in new
chr7	143796294	143796720	chr7:143796294-143796720	7	+	143796294	143796294	16724991	1	426,	0,
#Partially deleted in new
chr7	143800731	143817973	chr7:143800731-143817973	7	+	143800731	143800731	16724991	8	137,147,992,98,214,240,338,255,	0,5847,9258,10857,12232,12785,13934,16987,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	143810372	143814875	chr7:143810372-143814875	4	+	143810372	143810372	16724991	5	609,573,214,240,210,	0,741,2591,3144,4293,
#Partially deleted in new
chr7	143811389	143836706	chr7:143811389-143836706	4	-	143811389	143811389	16724991	3	237,159,67,	0,2231,25250,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	143811967	143836933	chr7:143811967-143836933	5	-	143811967	143811967	16724991	2	1812,294,	0,24672,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	143811968	143836708	chr7:143811968-143836708	4	-	143811968	143811968	16724991	3	1811,637,69,	0,21278,24671,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	143811970	143836208	chr7:143811970-143836208	4	-	143811970	143811970	16724991	3	1809,637,52,	0,21276,24186,
#Partially deleted in new
chr7	143813334	143836670	chr7:143813334-143836670	4	-	143813334	143813334	16724991	3	445,113,31,	0,22822,23305,
#Partially deleted in new
chr7	143813458	143836225	chr7:143813458-143836225	4	-	143813458	143813458	16724991	3	321,155,69,	0,20270,22698,
#Deleted in new
chr7	143833244	143833869	chr7:143833244-143833869	5	-	143833244	143833244	16724991	1	625,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	143851374	143902155	chr7:143851374-143902155	3	-	143854132	143876608	789624	9	2768,251,338,240,214,98,995,634,195,	0,5725,7449,8833,9720,11041,11427,24614,50586,
#Partially deleted in new
chr7	143853695	143902126	chr7:143853695-143902126	1	-	143857095	143876608	789624	9	447,277,338,240,214,98,995,634,100,	0,3378,5128,6512,7399,8720,9106,22293,48331,
#Partially deleted in new
chr7	143853827	143885271	chr7:143853827-143885271	0	-	143853827	143853827	8553170	8	315,251,338,240,214,98,995,62,	0,3272,4996,6380,7267,8588,8974,31382,
#Partially deleted in new
chr7	143876107	143882883	chr7:143876107-143882883	0	-	143876107	143876608	789624	3	515,177,148,	0,5815,6628,
#Partially deleted in new
chr7	143876158	143882905	chr7:143876158-143882905	0	-	143876158	143876608	789624	2	464,170,	0,6577,
#Partially deleted in new
chr7	143876171	143902198	chr7:143876171-143902198	0	-	143876171	143876608	789624	2	451,125,	0,25902,
#Partially deleted in new
chr7	143876383	143885370	chr7:143876383-143885370	0	-	143876383	143876608	789624	3	239,177,161,	0,5539,8826,
#Deleted in new
chr7	143935165	143936279	chr7:143935165-143936279	3	+	143935232	143936186	789624	1	1114,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	143954843	143964360	chr7:143954843-143964360	3	+	143959970	143960924	789624	3	260,156,4413,	0,4109,5104,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	143955010	143964360	chr7:143955010-143964360	0	+	143955010	143955010	8553170	4	93,156,47,3730,	0,3942,4937,5620,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	143958962	143997312	chr7:143958962-143997312	0	+	143958962	143958962	8553170	3	146,87,172,	0,29215,38178,
#Deleted in new
chr7	143959926	143961015	chr7:143959926-143961015	1	+	143959970	143960924	789624	1	1089,	0,
#Deleted in new
chr7	143979120	143980225	chr7:143979120-143980225	7	-	143979120	143979120	16724991	2	463,235,	0,870,
#Deleted in new
chr7	143980904	143981820	chr7:143980904-143981820	7	+	143980904	143980904	16724991	1	916,	0,
#Deleted in new
chr7	143985141	143986651	chr7:143985141-143986651	7	+	143985141	143985141	16724991	1	1510,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	144000319	144008793	chr7:144000319-144008793	3	+	144003996	144004932	789624	2	331,4822,	0,3652,
#Deleted in new
chr7	144003928	144004983	chr7:144003928-144004983	1	+	144003996	144004932	789624	1	1055,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	144048947	144058845	chr7:144048947-144058845	3	+	144050401	144051337	789624	2	186,8495,	0,1403,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	144048947	144058845	chr7:144048947-144058845	0	+	144048947	144048947	8553170	2	186,378,	0,9520,
#Deleted in new
chr7	144050367	144051380	chr7:144050367-144051380	1	+	144050401	144051337	789624	1	1013,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	144069810	144075870	chr7:144069810-144075870	3	+	144074219	144075152	789624	2	86,1655,	0,4405,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	144070312	144075870	chr7:144070312-144075870	1	+	144074219	144075152	789624	2	78,1655,	0,3903,
#Deleted in new
chr7	144074181	144075195	chr7:144074181-144075195	1	+	144074219	144075152	789624	1	1014,	0,
#Deleted in new
chr7	144077720	144077825	chr7:144077720-144077825	7	+	144077720	144077720	16724991	1	105,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	144086277	144098953	chr7:144086277-144098953	3	+	144095107	144096040	789624	2	266,3897,	0,8779,
#Deleted in new
chr7	144095047	144096093	chr7:144095047-144096093	1	+	144095107	144096040	789624	1	1046,	0,
#Deleted in new
chr7	144109513	144110564	chr7:144109513-144110564	3	+	144109582	144110539	789624	1	1051,	0,
#Deleted in new
chr7	144118460	144119360	chr7:144118460-144119360	7	-	144118460	144118460	16724991	1	900,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	144123175	144131188	chr7:144123175-144131188	3	+	144129112	144130045	789624	2	89,2110,	0,5903,
#Deleted in new
chr7	144129057	144130069	chr7:144129057-144130069	1	+	144129112	144130045	789624	1	1012,	0,
#Deleted in new
chr7	144142008	144142938	chr7:144142008-144142938	7	+	144142008	144142008	16724991	1	930,	0,
#Deleted in new
chr7	144153485	144158905	chr7:144153485-144158905	7	+	144153485	144153485	16724991	2	84,1692,	0,3728,
#Deleted in new
chr7	144157225	144158178	chr7:144157225-144158178	5	+	144157225	144157225	16724991	1	953,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	144176739	144177142	chr7:144176739-144177142	7	+	144176739	144176739	16724991	1	403,	0,
#Deleted in new
chr7	144183465	144186053	chr7:144183465-144186053	3	+	144183503	144185837	789624	1	2588,	0,
#Partially deleted in new
chr7	144186082	144195655	chr7:144186082-144195655	3	-	144186928	144188383	789624	2	2313,118,	0,9455,
#Partially deleted in new
chr7	144195320	144280547	chr7:144195320-144280547	0	+	144195320	144195320	8553170	3	381,112,76,	0,12372,85151,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	144195357	144214223	chr7:144195357-144214223	0	+	144195357	144195357	8553170	4	344,107,112,210,	0,4813,12335,18656,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	144195492	144216657	chr7:144195492-144216657	1	+	144195492	144195492	8553170	5	209,107,340,112,2644,	0,4678,6059,12200,18521,
#Partially deleted in new
chr7	144195518	144250505	chr7:144195518-144250505	0	+	144195518	144195518	8553170	5	183,112,56,114,66,	0,12174,43521,43756,54921,
#Partially deleted in new
chr7	144195887	144232295	chr7:144195887-144232295	0	+	144195887	144195887	8553170	3	170,112,274,	0,11805,36134,
#Partially deleted in new
chr7	144207689	144250581	chr7:144207689-144250581	0	+	144207689	144207689	8553170	2	115,142,	0,42750,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	144228243	144239605	chr7:144228243-144239605	3	-	144231910	144232843	789624	3	4604,312,30,	0,10188,11332,
#Partially deleted in new
chr7	144231910	144232843	chr7:144231910-144232843	1	-	144231910	144232843	789624	1	933,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	144250044	144252957	chr7:144250044-144252957	5	-	144250044	144250044	16724991	1	2913,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	144250044	144256244	chr7:144250044-144256244	7	-	144250044	144250044	16724991	5	1566,56,263,224,64,	0,3488,4389,5464,6136,
#Deleted in new
chr7	144250670	144251603	chr7:144250670-144251603	5	-	144250670	144250670	16724991	1	933,	0,
#Partially deleted in new
chr7	144251263	144355138	chr7:144251263-144355138	1	-	144251263	144251263	8553170	3	347,263,157,	0,3170,103718,
#Partially deleted in new
chr7	144251324	144355529	chr7:144251324-144355529	3	-	144251324	144251324	8553170	6	286,114,53,112,107,192,	0,60266,60559,91862,99393,104013,
#Partially deleted in new
chr7	144251386	144343298	chr7:144251386-144343298	0	-	144251386	144251386	8553170	2	224,112,	0,91800,
#Partially deleted in new
chr7	144251407	144355707	chr7:144251407-144355707	0	-	144251407	144251407	8553170	2	203,370,	0,103930,
#Partially deleted in new
chr7	144251661	144256244	chr7:144251661-144256244	5	-	144251661	144251661	16724991	5	831,56,93,224,64,	0,1871,2942,3847,4519,
#Partially deleted in new
chr7	144252295	144355600	chr7:144252295-144355600	0	-	144252295	144252295	8553170	2	197,263,	0,103042,
#Partially deleted in new
chr7	144254095	144355368	chr7:144254095-144355368	1	-	144254095	144254095	8553170	3	601,129,31,	0,99936,101242,
#Partially deleted in new
chr7	144257662	144264792	chr7:144257662-144264792	3	-	144258695	144259628	789624	2	1970,92,	0,7038,
#Deleted in new
chr7	144258606	144259722	chr7:144258606-144259722	1	-	144258695	144259628	789624	1	1116,	0,
#Deleted in new
chr7	144266700	144269288	chr7:144266700-144269288	3	-	144266916	144269250	789624	1	2588,	0,
#Partially deleted in new
chr7	144272444	144286966	chr7:144272444-144286966	7	-	144272444	144272444	16724991	12	71,162,158,90,75,130,153,162,254,65,58,3154,	0,1515,2301,3907,4434,4763,5162,5868,9836,10281,10779,11368,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	144294479	144300934	chr7:144294479-144300934	7	+	144294479	144294479	16724991	3	158,263,1569,	0,1800,4886,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	144296279	144300934	chr7:144296279-144300934	5	+	144296279	144296279	16724991	3	263,197,1569,	0,2204,3086,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	144298018	144300931	chr7:144298018-144300931	4	+	144298018	144298018	16724991	1	2913,	0,
#Deleted in new
chr7	144299372	144300305	chr7:144299372-144300305	5	+	144299372	144299372	16724991	1	933,	0,
#Partially deleted in new
chr7	144300394	144343301	chr7:144300394-144343301	0	-	144300394	144300394	8553170	2	142,115,	0,42792,
#Partially deleted in new
chr7	144300470	144355520	chr7:144300470-144355520	3	-	144300470	144300470	8553170	5	66,114,56,112,183,	0,11120,11413,42716,54867,
#Partially deleted in new
chr7	144311590	144355703	chr7:144311590-144355703	0	-	144311590	144311590	8553170	3	114,112,366,	0,31596,43747,
#Partially deleted in new
chr7	144311882	144356181	chr7:144311882-144356181	0	-	144311882	144311882	8553170	4	57,112,107,282,	0,31304,38835,44017,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	144312463	144322668	chr7:144312463-144322668	3	+	144318124	144319057	789624	2	84,4548,	0,5657,
#Partially deleted in new
chr7	144318124	144319057	chr7:144318124-144319057	1	+	144318124	144319057	789624	1	933,	0,
#Partially deleted in new
chr7	144318672	144355151	chr7:144318672-144355151	0	-	144318672	144318672	8553170	3	274,112,170,	0,24514,36309,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	144336767	144355681	chr7:144336767-144355681	1	-	144336767	144336767	8553170	4	210,112,107,344,	0,6419,13950,18570,
#Duplicated in new
chr7	144343170	144355219	chr7:144343170-144355219	1	-	144343170	144343170	8553170	4	128,107,129,238,	0,7547,10861,11811,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	144343241	144355401	chr7:144343241-144355401	1	-	144343241	144343241	8553170	4	57,340,107,64,	0,5862,7476,12096,
#Partially deleted in new
chr7	144355287	144367339	chr7:144355287-144367339	0	+	144362669	144367339	789624	5	214,196,58,65,238,	0,7370,11067,11558,11814,
#Partially deleted in new
chr7	144355339	144380632	chr7:144355339-144380632	3	+	144362669	144380056	789624	15	162,3166,58,65,254,161,153,130,75,90,158,162,71,105,734,	0,7318,11015,11506,11762,15821,16537,16959,17343,17855,19392,20174,21780,23422,24559,
#Partially deleted in new
chr7	144364908	144380631	chr7:144364908-144380631	0	+	144364908	144380056	789624	13	915,58,65,254,161,153,130,75,90,158,71,105,733,	0,1446,1937,2193,6252,6968,7390,7774,8286,9823,12211,13853,14990,
#Partially deleted in new
chr7	144366132	144380056	chr7:144366132-144380056	1	+	144366867	144380056	789624	13	280,65,254,161,153,130,75,90,158,162,71,105,158,	0,713,969,5028,5744,6166,6550,7062,8599,9381,10987,12629,13766,
#Partially deleted in new
chr7	144397239	144410227	chr7:144397239-144410227	1	-	144397239	144410227	789624	10	302,305,229,86,107,203,552,82,125,85,	0,1042,1710,2157,2517,2870,3806,4629,7316,12903,
#Partially deleted in new
chr7	144397239	144410227	chr7:144397239-144410227	3	-	144397239	144410227	789624	10	302,305,229,86,107,107,552,82,125,85,	0,1042,1710,2157,2517,2966,3806,4629,7316,12903,
#Partially deleted in new
chr7	144397239	144403693	chr7:144397239-144403693	1	-	144397239	144403693	789624	8	302,305,229,86,107,107,552,37,	0,1042,1710,2157,2517,2966,3806,6417,
#Partially deleted in new
chr7	144397510	144403693	chr7:144397510-144403693	0	-	144397510	144403693	789624	7	31,305,229,86,107,107,37,	0,771,1439,1886,2246,2695,6146,
#Deleted in new
chr7	144434825	144435314	chr7:144434825-144435314	7	-	144434825	144434825	16724991	1	489,	0,
#Deleted in new
chr7	144451680	144451817	chr7:144451680-144451817	3	+	144451680	144451680	8553170	1	137,	0,
#Partially deleted in new
chr7	144451940	144836053	chr7:144451940-144836053	3	-	144453544	144835602	0	9	1723,112,147,96,73,70,72,59,87,	0,96550,139482,171225,196866,230968,313939,383619,384026,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr7	144451940	144738922	chr7:144451940-144738922	0	-	144648867	144682957	789624	12	1723,106,112,147,122,96,73,121,58,70,100,87,	0,79123,96550,139482,154988,171225,196866,215785,229866,230968,284213,286895,
#Partially deleted in new
chr7	144451942	144724159	chr7:144451942-144724159	1	-	144453544	144682957	789624	7	1721,112,96,73,121,70,50,	0,96548,171223,196864,215783,230966,272167,
#Partially deleted in new
chr7	144451949	144836053	chr7:144451949-144836053	1	-	144453544	144835602	789624	8	1714,112,96,73,70,72,59,87,	0,96541,171216,196857,230959,313930,383610,384017,
#Partially deleted in new
chr7	144452581	144836053	chr7:144452581-144836053	0	-	144607038	144835602	789624	10	1082,112,147,122,96,73,70,72,59,87,	0,95909,138841,154347,170584,196225,230327,313298,382978,383385,
#Partially deleted in new
chr7	144453427	144666702	chr7:144453427-144666702	0	-	144453427	144453427	8553170	6	236,112,147,96,73,83,	0,95063,137995,169738,195379,213192,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	144530870	144836053	chr7:144530870-144836053	1	-	144530870	144623201	789624	10	4,106,112,147,96,73,70,72,59,87,	0,193,17620,60552,92295,117936,152038,235009,304689,305096,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	144531109	144666718	chr7:144531109-144666718	0	-	144531109	144531109	8553170	5	60,112,96,73,99,	0,17381,92056,117697,135510,
#Partially deleted in new
chr7	144591136	144646114	chr7:144591136-144646114	0	-	144591136	144591136	8553170	3	433,96,29,	0,32029,54949,
#Partially deleted in new
chr7	144591423	144836395	chr7:144591423-144836395	0	-	144591423	144835602	789624	7	146,96,73,70,72,59,65,	0,31742,57383,91485,174456,244136,244907,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	144619180	144739477	chr7:144619180-144739477	0	-	144619180	144619180	8553170	4	4081,73,70,205,	0,29626,63728,120092,
#Partially deleted in new
chr7	144643543	144738924	chr7:144643543-144738924	0	-	144646156	144682957	789624	6	30,78,73,70,100,89,	0,2542,5263,39365,92610,95292,
#Deleted in new
chr7	144647185	144648575	chr7:144647185-144648575	7	-	144647185	144647185	16724991	1	1390,	0,
#Deleted in new
chr7	144835130	144835999	chr7:144835130-144835999	0	-	144835130	144835130	8553170	2	488,33,	0,836,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	144849754	144850084	chr7:144849754-144850084	3	-	144849754	144849754	8553170	1	330,	0,
#Partially deleted in new
chr7	145005057	145006135	chr7:145005057-145006135	7	+	145005057	145005057	16724991	1	1078,	0,
#Deleted in new
chr7	145009960	145010993	chr7:145009960-145010993	7	+	145009960	145009960	16724991	1	1033,	0,
#Deleted in new
chr7	145039998	145040941	chr7:145039998-145040941	7	-	145039998	145039998	16724991	1	943,	0,
#Deleted in new
chr7	145269513	145270384	chr7:145269513-145270384	7	+	145269513	145269513	16724991	1	871,	0,
#Deleted in new
chr7	145583196	145584817	chr7:145583196-145584817	7	+	145583196	145583196	16724991	1	1621,	0,
#Partially deleted in new
chr7	145675881	145681369	chr7:145675881-145681369	3	-	145675881	145675881	8553170	2	411,261,	0,5227,
#Deleted in new
chr7	146050061	146050366	chr7:146050061-146050366	3	+	146050061	146050061	8553170	1	305,	0,
#Partially deleted in new
chr7	146116001	146839861	chr7:146116001-146839861	0	+	146116876	146839861	789624	4	88,326,111,151,	0,646,658269,723709,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr7	146116358	148420998	chr7:146116358-148420998	3	+	146116876	148415616	789624	24	615,111,194,148,204,185,144,265,150,172,107,120,201,157,128,171,219,237,237,134,94,240,81,5582,	0,657912,723352,927548,991788,1004620,1012334,1015886,1183782,1279250,1369576,1445779,1522747,1787206,1861503,2001759,2031132,2055883,2100929,2113287,2150674,2267290,2293032,2299058,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr7	146116641	148420998	chr7:146116641-148420998	1	+	146116876	148415616	789624	24	332,111,194,148,204,185,144,265,150,172,107,120,201,157,128,171,219,237,237,134,94,240,81,5582,	0,657629,723069,927265,991505,1004337,1012051,1015603,1183499,1278967,1369293,1445496,1522464,1786923,1861220,2001476,2030849,2055600,2100646,2113004,2150391,2267007,2292749,2298775,
#Partially deleted in new
chr7	146116947	147146755	chr7:146116947-147146755	0	+	146116947	146116947	8553170	9	26,111,194,148,204,185,144,265,490,	0,657323,722763,926959,991199,1004031,1011745,1015297,1029318,
#Partially deleted in new
chr7	146117259	146195165	chr7:146117259-146195165	0	+	146117259	146117259	8553170	2	45,55,	0,77851,
#Deleted in new
chr7	146208664	146208819	chr7:146208664-146208819	3	-	146208664	146208664	8553170	1	155,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	146311719	146311822	chr7:146311719-146311822	3	+	146311719	146311719	8553170	1	103,	0,
#Partially deleted in new
chr7	146774270	147162172	chr7:146774270-147162172	0	+	146774270	146774270	8553170	8	111,194,148,204,185,144,265,536,	0,65440,269636,333876,346708,354422,357974,387366,
#Partially deleted in new
chr7	146774270	147497153	chr7:146774270-147497153	0	+	146774270	146774270	8553170	11	111,194,148,204,185,144,265,150,172,107,533,	0,65440,269636,333876,346708,354422,357974,525870,621338,711664,722350,
#Partially deleted in new
chr7	146774270	147643472	chr7:146774270-147643472	0	+	146774270	146774270	8553170	13	111,194,148,204,185,144,265,150,172,107,120,201,86,	0,65440,269636,333876,346708,354422,357974,525870,621338,711664,787867,864835,869116,
#Partially deleted in new
chr7	146774306	146786893	chr7:146774306-146786893	0	+	146774306	146774306	8553170	2	75,25,	0,12562,
#Partially deleted in new
chr7	146774323	146782250	chr7:146774323-146782250	0	+	146774323	146774323	8553170	2	58,42,	0,7885,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	146915846	147122907	chr7:146915846-147122907	0	+	146915846	146915846	8553170	4	60,148,204,1929,	0,128060,192300,205132,
#Partially deleted in new
chr7	146962891	148415768	chr7:146962891-148415768	0	+	146962891	146962891	8553170	22	264,148,204,185,144,265,150,172,107,120,201,157,128,171,219,237,237,134,94,240,81,352,	0,81015,145255,158087,165801,169353,337249,432717,523043,599246,676214,940673,1014970,1155226,1184599,1209350,1254396,1266754,1304141,1420757,1446499,1452525,
#Partially deleted in new
chr7	147044021	148014298	chr7:147044021-148014298	0	+	147044021	147044021	8553170	14	33,204,185,144,265,150,172,107,120,201,157,128,30,228,	0,64125,76957,84671,88223,256119,351587,441913,518116,595084,859543,933840,969149,970049,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	147080933	147097609	chr7:147080933-147097609	3	-	147080933	147080933	789624	4	1155,682,130,178,	0,1606,4759,16498,
#Partially deleted in new
chr7	147146341	147146756	chr7:147146341-147146756	7	+	147146341	147146341	16724991	1	415,	0,
#Partially deleted in new
chr7	147167343	147167572	chr7:147167343-147167572	7	+	147167343	147167343	16724991	1	229,	0,
#Deleted in new
chr7	147378016	147378121	chr7:147378016-147378121	3	-	147378016	147378016	5263520	1	105,	0,
#Partially deleted in new
chr7	147638808	148415779	chr7:147638808-148415779	0	+	147638808	147638808	8553170	13	70,201,157,128,171,219,237,237,134,94,240,81,363,	0,297,264756,339053,479309,508682,533433,578479,590837,628224,744840,770582,776608,
#Partially deleted in new
chr7	147639273	147978182	chr7:147639273-147978182	0	+	147639273	147639273	8553170	3	33,157,321,	0,264291,338588,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	147671710	147673143	chr7:147671710-147673143	3	+	147671710	147671710	789624	2	423,693,	0,740,
#Deleted in new
chr7	147704293	147704575	chr7:147704293-147704575	7	-	147704293	147704293	16724991	1	282,	0,
#Deleted in new
chr7	147831769	147831877	chr7:147831769-147831877	3	+	147831769	147831769	8553170	1	108,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	147849883	147849982	chr7:147849883-147849982	7	+	147849883	147849883	16724991	1	99,	0,
#Partially deleted in new
chr7	147894155	147903602	chr7:147894155-147903602	0	+	147894155	147894155	8553170	2	62,38,	0,9409,
#Partially deleted in new
chr7	147897028	147903619	chr7:147897028-147903619	0	+	147897028	147897028	8553170	2	45,55,	0,6536,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	147940006	147940301	chr7:147940006-147940301	3	+	147940006	147940006	8553170	1	295,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	148044591	148172389	chr7:148044591-148172389	0	+	148044591	148044591	8553170	4	112,171,219,148,	0,73526,102899,127650,
#Partially deleted in new
chr7	148056472	148416675	chr7:148056472-148416675	0	+	148056472	148056472	8553170	10	201,171,219,237,237,134,94,240,81,1259,	0,61645,91018,115769,160815,173173,210560,327176,352918,358944,
#Partially deleted in new
chr7	148133683	148415940	chr7:148133683-148415940	1	+	148172291	148415616	789624	9	178,219,237,237,134,94,240,81,524,	0,13807,38558,83604,95962,133349,249965,275707,281733,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	148172383	148190854	chr7:148172383-148190854	0	+	148172383	148172383	8553170	2	95,974,	0,17497,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	148263054	148420920	chr7:148263054-148420920	0	+	148263054	148263054	8553170	5	182,94,240,81,5504,	0,3978,120594,146336,152362,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	148339460	148420998	chr7:148339460-148420998	1	+	148383842	148415616	789624	4	173,240,81,5582,	0,44188,69930,75956,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	148389644	148389859	chr7:148389644-148389859	3	+	148389644	148389644	8553170	1	215,	0,
#Deleted in new
chr7	148414747	148415870	chr7:148414747-148415870	0	+	148414747	148414747	8553170	2	154,454,	0,669,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	148438308	148438577	chr7:148438308-148438577	3	+	148438308	148438308	8553170	1	269,	0,
#Deleted in new
chr7	148445785	148446299	chr7:148445785-148446299	7	+	148445785	148445785	16724991	1	514,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	148473598	148503458	chr7:148473598-148503458	3	-	148473598	148473598	8553170	3	1150,153,198,	0,3764,29662,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	148543676	148572177	chr7:148543676-148572177	3	-	148543676	148543676	8553170	6	804,77,46,67,179,54,	0,2586,18588,24097,24423,28447,
#Deleted in new
chr7	148580400	148580799	chr7:148580400-148580799	7	+	148580400	148580400	16724991	1	399,	0,
#Partially deleted in new
chr7	148590564	148615860	chr7:148590564-148615860	3	+	148590925	148615401	789624	3	565,255,534,	0,23477,24762,
#Deleted in new
chr7	148637178	148637587	chr7:148637178-148637587	7	+	148637178	148637178	16724991	1	409,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	148649546	148650240	chr7:148649546-148650240	7	+	148649546	148649546	16724991	2	211,112,	0,582,
#Deleted in new
chr7	148696466	148698664	chr7:148696466-148698664	3	-	148696466	148696466	8553170	1	2198,	0,
#Partially deleted in new
chr7	148697913	148800582	chr7:148697913-148800582	3	+	148730122	148800582	0	22	365,301,175,168,51,91,164,163,131,108,107,49,132,118,77,132,93,48,83,106,114,81,	0,32048,56062,59069,61390,61634,62419,68647,69705,85869,86057,88637,89075,90643,91836,92396,94812,99898,100023,100658,101361,102588,
#Partially deleted in new
chr7	148698644	148801025	chr7:148698644-148801025	1	+	148730122	148800582	0	22	119,301,175,168,51,91,164,163,131,108,107,49,132,118,77,132,93,48,83,106,114,524,	0,31317,55331,58338,60659,60903,61688,67916,68974,85138,85326,87906,88344,89912,91105,91665,94081,99167,99292,99927,100630,101857,
#Partially deleted in new
chr7	148698911	148801036	chr7:148698911-148801036	1	+	148730122	148800582	0	22	118,301,175,168,51,91,164,163,131,108,107,49,132,118,77,132,93,48,83,106,114,535,	0,31050,55064,58071,60392,60636,61421,67649,68707,84871,85059,87639,88077,89645,90838,91398,93814,98900,99025,99660,100363,101590,
#Partially deleted in new
chr7	148729998	148800707	chr7:148729998-148800707	1	+	148730122	148800582	789624	22	264,34,69,168,51,91,164,163,131,108,107,49,132,118,77,132,93,48,83,106,114,206,	0,23977,24083,26984,29305,29549,30334,36562,37620,53784,53972,56552,56990,58558,59751,60311,62727,67813,67938,68573,69276,70503,
#Partially deleted in new
chr7	148807382	148884283	chr7:148807382-148884283	0	-	148819038	148847298	789624	19	324,85,81,82,96,179,126,41,1434,82,92,164,103,141,121,117,129,124,120,	0,1688,1927,2950,4242,6576,7531,8123,9301,11595,12213,19086,19781,21357,22345,25251,39087,39799,76781,
#Partially deleted in new
chr7	148807383	148884159	chr7:148807383-148884159	1	-	148807645	148847298	0	20	323,85,81,82,96,179,41,95,170,241,92,164,103,141,121,117,102,124,65,100,	0,1687,1926,2949,4241,6575,8122,9300,9838,10493,12212,19085,19780,21356,22344,25250,39113,39798,75813,76676,
#Partially deleted in new
chr7	148807384	148884278	chr7:148807384-148884278	3	-	148807645	148847298	0	20	322,85,81,82,96,179,126,41,95,170,241,92,179,103,141,121,117,129,124,115,	0,1686,1925,2948,4240,6574,7529,8121,9299,9837,10492,12211,19069,19779,21355,22343,25249,39085,39797,76779,
#Partially deleted in new
chr7	148807384	148884248	chr7:148807384-148884248	1	-	148807645	148847298	0	19	322,85,81,82,96,179,126,41,95,170,241,92,164,103,141,121,129,124,85,	0,1686,1925,2948,4240,6574,7529,8121,9299,9837,10492,12211,19084,19779,21355,22343,39085,39797,76779,
#Partially deleted in new
chr7	148807384	148884245	chr7:148807384-148884245	1	-	148807645	148847298	0	20	322,85,81,82,96,179,126,41,95,170,241,92,164,103,141,121,117,129,124,82,	0,1686,1925,2948,4240,6574,7529,8121,9299,9837,10492,12211,19084,19779,21355,22343,25249,39085,39797,76779,
#Partially deleted in new
chr7	148807481	148883509	chr7:148807481-148883509	1	-	148807645	148847298	0	19	225,85,81,82,96,179,41,95,170,241,92,164,103,141,121,117,102,124,313,	0,1589,1828,2851,4143,6477,8024,9202,9740,10395,12114,18987,19682,21258,22246,25152,39015,39700,75715,
#Partially deleted in new
chr7	148807524	148884287	chr7:148807524-148884287	1	-	148807645	148847298	0	20	182,85,81,82,96,179,126,41,95,170,241,92,164,103,141,121,117,102,124,124,	0,1546,1785,2808,4100,6434,7389,7981,9159,9697,10352,12071,18944,19639,21215,22203,25109,38972,39657,76639,
#Partially deleted in new
chr7	148810199	148811823	chr7:148810199-148811823	0	-	148810199	148810199	8553170	2	215,199,	0,1425,
#Partially deleted in new
chr7	148817356	148884287	chr7:148817356-148884287	0	-	148817356	148817356	8553170	10	761,92,164,103,141,121,117,129,124,124,	0,2239,9112,9807,11383,12371,15277,29113,29825,66807,
#Partially deleted in new
chr7	148818036	148884321	chr7:148818036-148884321	0	-	148832740	148847298	789624	12	81,82,92,164,103,141,121,117,179,129,124,158,	0,941,1559,8432,9127,10703,11691,14597,18785,28433,29145,66127,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	148821011	148821073	chr7:148821011-148821073	3	+	148821011	148821011	8553170	1	62,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	148876017	148876286	chr7:148876017-148876286	3	+	148876017	148876017	8553170	1	269,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	148890225	148890513	chr7:148890225-148890513	3	+	148890225	148890225	8553170	1	288,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	148963314	148963410	chr7:148963314-148963410	3	+	148963314	148963314	5263520	1	96,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	148983754	148983856	chr7:148983754-148983856	3	+	148983754	148983754	5263520	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	148987135	148987248	chr7:148987135-148987248	3	-	148987135	148987135	5263520	1	113,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	148987526	148989432	chr7:148987526-148989432	3	+	148987526	148987526	789624	1	1906,	0,
#Partially deleted in new
chr7	149003061	149028641	chr7:149003061-149028641	3	-	149003793	149028408	0	10	1148,234,157,152,159,206,139,206,181,321,	0,2079,2835,5097,8784,9093,11842,15930,17905,25259,
#Deleted in new
chr7	149004198	149006283	chr7:149004198-149006283	0	-	149004198	149004198	8553170	3	11,234,387,	0,942,1698,
#Partially deleted in new
chr7	149019120	149028468	chr7:149019120-149028468	0	-	149019120	149028408	789624	4	77,181,144,148,	0,1846,8728,9200,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	149033056	149033167	chr7:149033056-149033167	3	+	149033056	149033056	8553170	1	111,	0,
#Partially deleted in new
chr7	149053960	149054173	chr7:149053960-149054173	7	+	149053960	149053960	16724991	1	213,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	149069642	149090782	chr7:149069642-149090782	1	-	149070422	149074425	789624	3	2831,153,160,	0,4743,20980,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	149069962	149090705	chr7:149069962-149090705	3	-	149070422	149090640	789624	4	2511,153,127,83,	0,4423,10628,20660,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	149102783	149126346	chr7:149102783-149126346	3	-	149103611	149126213	789624	4	2783,159,127,151,	0,9353,15438,23412,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	149105272	149112396	chr7:149105272-149112396	0	-	149105272	149105272	8553170	2	294,260,	0,6864,
#Partially deleted in new
chr7	149105488	149126306	chr7:149105488-149126306	0	-	149105488	149126213	789624	4	78,159,127,177,	0,6648,12733,20641,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	149112017	149113454	chr7:149112017-149113454	0	-	149112017	149112017	8553170	2	356,181,	0,1256,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	149125689	149125986	chr7:149125689-149125986	3	-	149125689	149125689	8553170	1	297,	0,
#Partially deleted in new
chr7	149147107	149166235	chr7:149147107-149166235	0	+	149147107	149147107	8553170	3	135,396,78,	0,6837,19050,
#Partially deleted in new
chr7	149147475	149180465	chr7:149147475-149180465	1	+	149147742	149179801	789624	6	291,396,127,114,114,1818,	0,6469,18682,19341,28992,31172,
#Partially deleted in new
chr7	149148126	149179883	chr7:149148126-149179883	1	+	149166250	149179801	789624	6	157,373,127,114,114,1236,	0,5818,18031,18690,28341,30521,
#Partially deleted in new
chr7	149148402	149179938	chr7:149148402-149179938	1	+	149166250	149179801	789624	7	114,76,396,127,114,114,1291,	0,2804,5542,17755,18414,28065,30245,
#Deleted in new
chr7	149191042	149191223	chr7:149191042-149191223	7	-	149191042	149191042	16724991	1	181,	0,
#Partially deleted in new
chr7	149195484	149226248	chr7:149195484-149226248	3	+	149195589	149224647	789624	8	270,420,127,120,120,114,114,2437,	0,2848,11211,11866,15100,16873,18216,28327,
#Partially deleted in new
chr7	149195549	149224663	chr7:149195549-149224663	1	+	149195589	149224280	789624	9	205,420,127,120,120,114,114,179,416,	0,2783,11146,11801,15035,16808,18151,28262,28698,
#Deleted in new
chr7	149206635	149207386	chr7:149206635-149207386	0	+	149206635	149206635	8553170	2	187,36,	0,715,
#Partially deleted in new
chr7	149212307	149224266	chr7:149212307-149224266	0	+	149212307	149212307	8553170	3	164,114,455,	0,1393,11504,
#Partially deleted in new
chr7	149239650	149255609	chr7:149239650-149255609	3	+	149239778	149254415	789624	5	152,390,127,90,2051,	0,10508,11030,13055,13908,
#Partially deleted in new
chr7	149239661	149250400	chr7:149239661-149250400	0	+	149239778	149239931	789624	2	395,242,	0,10497,
#Partially deleted in new
chr7	149239693	149250792	chr7:149239693-149250792	0	+	149239778	149239931	789624	3	363,385,112,	0,10470,10987,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	149250709	149253811	chr7:149250709-149253811	0	+	149250709	149251319	789624	4	98,118,90,253,	0,500,1996,2849,
#Partially deleted in new
chr7	149262170	149297301	chr7:149262170-149297301	0	+	149262333	149287608	789624	14	187,396,127,126,129,212,101,190,98,116,266,33,644,251,	0,4164,4648,4926,16228,25394,27767,29385,30040,31206,31580,32209,32369,34880,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	149262170	149284991	chr7:149262170-149284991	3	+	149262333	149282343	789624	6	187,396,127,126,129,3487,	0,4164,4648,4926,16228,19334,
#Partially deleted in new
chr7	149262214	149295185	chr7:149262214-149295185	0	+	149262333	149287608	789624	11	143,396,127,126,129,212,101,98,116,92,806,	0,4120,4604,4882,16184,25350,27723,29996,31162,31536,32165,
#Partially deleted in new
chr7	149275618	149277992	chr7:149275618-149277992	7	-	149275618	149275618	16724991	4	225,429,249,192,	0,609,1529,2182,
#Partially deleted in new
chr7	149278131	149297302	chr7:149278131-149297302	0	+	149278131	149278131	8553170	10	117,129,212,71,146,98,116,266,522,252,	0,267,9433,10489,11806,14079,15245,15619,16248,18919,
#Partially deleted in new
chr7	149278137	149293488	chr7:149278137-149293488	0	+	149278137	149278137	8553170	6	111,129,212,101,98,112,	0,261,9427,11800,14073,15239,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	149285280	149293762	chr7:149285280-149293762	5	+	149285280	149285280	16724991	7	416,212,1027,179,101,98,386,	0,2284,3150,4267,4657,6930,8096,
#Partially deleted in new
chr7	149285280	149294053	chr7:149285280-149294053	5	+	149285280	149285280	16724991	6	216,212,101,190,98,677,	0,2284,4657,6275,6930,8096,
#Partially deleted in new
chr7	149285310	149293823	chr7:149285310-149293823	6	+	149285310	149285310	16724991	4	186,212,98,447,	0,2254,6900,8066,
#Partially deleted in new
chr7	149287613	149295201	chr7:149287613-149295201	5	+	149287613	149287613	16724991	2	303,598,	0,6990,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	149287698	149297312	chr7:149287698-149297312	5	+	149287698	149287698	16724991	10	78,1027,179,101,98,116,266,33,644,262,	0,732,1849,2239,4512,5678,6052,6681,6841,9352,
#Deleted in new
chr7	149294088	149297302	chr7:149294088-149297302	4	+	149294088	149294088	16724991	3	324,644,252,	0,451,2962,
#Partially deleted in new
chr7	149321864	149322092	chr7:149321864-149322092	7	-	149321864	149321864	16724991	1	228,	0,
#Deleted in new
chr7	149334023	149334857	chr7:149334023-149334857	7	+	149334023	149334023	16724991	1	834,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	149398203	149401456	chr7:149398203-149401456	3	+	149398203	149398203	8553170	2	340,2780,	0,473,
#Deleted in new
chr7	149422674	149424890	chr7:149422674-149424890	3	+	149422674	149422674	8553170	1	2216,	0,
#Partially deleted in new
chr7	149431362	149461123	chr7:149431362-149461123	3	-	149431775	149456022	789624	6	1570,252,114,127,861,309,	0,5212,19636,22748,23814,29452,
#Partially deleted in new
chr7	149472695	149497817	chr7:149472695-149497817	3	-	149474383	149497536	789624	7	2785,126,192,114,127,300,305,	0,4226,4868,20163,21293,21508,24817,
#Partially deleted in new
chr7	149472793	149497817	chr7:149472793-149497817	1	-	149474383	149497536	789624	7	2687,126,192,114,82,300,305,	0,4128,4770,20065,21195,21410,24719,
#Partially deleted in new
chr7	149472795	149497807	chr7:149472795-149497807	1	-	149474383	149497536	789624	7	2688,126,192,114,82,300,295,	0,4126,4768,20063,21193,21408,24717,
#Partially deleted in new
chr7	149475377	149477872	chr7:149475377-149477872	0	-	149475377	149475377	8553170	3	106,126,309,	0,1544,2186,
#Partially deleted in new
chr7	149487619	149497733	chr7:149487619-149497733	1	-	149491909	149497536	789624	5	4334,114,82,300,221,	0,5239,6369,6584,9893,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	149547153	149624727	chr7:149547153-149624727	5	-	149547153	149547153	16724991	8	2221,79,172,216,232,114,300,186,	0,3714,4501,5647,11454,72770,74106,77388,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	149547158	149624752	chr7:149547158-149624752	7	-	149547158	149547158	16724991	9	618,182,79,253,216,114,127,300,211,	0,2034,3709,4415,5642,72765,73887,74101,77383,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	149549082	149624628	chr7:149549082-149624628	4	-	149549082	149549082	16724991	9	292,79,172,213,232,114,127,300,87,	0,1785,2572,3718,9525,70841,71963,72177,75459,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	149558785	149621150	chr7:149558785-149621150	4	-	149558785	149558785	16724991	4	54,84,114,105,	0,4734,61138,62260,
#Partially deleted in new
chr7	149619748	149621344	chr7:149619748-149621344	4	-	149619748	149619748	16724991	3	289,127,85,	0,1297,1511,
#Partially deleted in new
chr7	149619923	149624565	chr7:149619923-149624565	5	-	149619923	149619923	16724991	4	114,127,300,24,	0,1122,1336,4618,
#Partially deleted in new
chr7	149714780	149720124	chr7:149714780-149720124	0	+	149719638	149720124	789624	4	286,111,127,72,	0,458,4765,5272,
#Partially deleted in new
chr7	149715010	149734571	chr7:149715010-149734571	3	+	149715054	149734047	789624	17	56,127,120,156,153,132,174,156,198,174,174,153,183,195,141,105,1366,	0,4535,4997,5824,6372,7411,7772,8723,9641,10304,10876,13512,14177,15136,15417,16661,18195,
#Partially deleted in new
chr7	149715056	149734575	chr7:149715056-149734575	1	+	149719638	149734047	789624	17	293,140,120,156,156,132,174,156,198,174,174,153,183,195,141,105,1370,	0,4476,4951,5778,6323,7365,7726,8677,9595,10258,10830,13466,14131,15090,15371,16615,18149,
#Deleted in new
chr7	149719421	149720990	chr7:149719421-149720990	0	+	149719638	149720990	789624	3	251,120,156,	0,586,1413,
#Partially deleted in new
chr7	149719638	149734571	chr7:149719638-149734571	1	+	149719638	149734047	789624	15	34,120,156,156,132,174,156,198,174,174,153,195,141,105,1366,	0,369,1196,1741,2783,3144,4095,5013,5676,6248,8884,10508,10789,12033,13567,
#Partially deleted in new
chr7	149720100	149734571	chr7:149720100-149734571	0	+	149720100	149730588	789624	14	27,156,153,132,174,156,198,174,174,153,195,286,105,1366,	0,734,1282,2321,2682,3633,4551,5214,5786,8422,10046,10327,11571,13105,
#Deleted in new
chr7	149720949	149722040	chr7:149720949-149722040	0	+	149720949	149721843	789624	2	41,658,	0,433,
#Deleted in new
chr7	149723560	149725441	chr7:149723560-149725441	0	+	149723560	149723560	8553170	3	329,198,127,	0,1091,1754,
#Deleted in new
chr7	149730039	149730697	chr7:149730039-149730697	0	+	149730039	149730039	8553170	2	302,270,	0,388,
#Partially deleted in new
chr7	149764181	149773219	chr7:149764181-149773219	1	-	149764499	149771032	789624	5	497,111,117,76,112,	0,4908,6258,6817,8926,
#Partially deleted in new
chr7	149764362	149773479	chr7:149764362-149773479	3	-	149764713	149771032	789624	5	1877,111,117,76,372,	0,4727,6077,6636,8745,
#Partially deleted in new
chr7	149776041	149833965	chr7:149776041-149833965	3	+	149776041	149833829	789624	107	50,183,83,180,245,94,159,80,153,172,241,145,118,176,228,166,235,55,132,95,257,135,197,128,110,150,94,170,234,222,237,92,232,153,141,183,151,154,55,105,219,128,145,151,73,58,171,144,219,165,180,123,130,126,92,174,165,95,158,47,171,83,46,146,95,53,207,171,80,170,47,192,171,201,97,200,167,131,224,42,156,210,168,132,247,153,47,336,168,131,125,47,279,128,28,114,139,203,128,143,47,215,96,61,131,155,155,	0,304,893,1142,1567,1910,2739,2986,3492,3918,4196,4737,6140,6805,7065,7469,7859,8786,8843,9089,9442,10047,11327,11625,11820,12279,12525,12710,13123,13559,14241,15260,15433,15775,16024,16257,16537,17268,17524,18752,19169,19497,20329,20554,21230,22026,23792,24245,25695,25998,26905,27185,27433,27646,27954,29369,29852,30693,30792,32216,32442,33000,33085,33347,34873,35623,35869,36224,36519,37588,38292,38430,38732,39133,39647,39848,40330,41576,41859,42414,42610,43264,43675,44608,44834,45355,45583,45820,46470,47310,47682,48044,48352,48923,49055,49236,49758,50033,50408,50637,50871,51729,52596,52894,55093,56726,57769,
#Partially deleted in new
chr7	149776041	149833965	chr7:149776041-149833965	0	+	149776041	149776041	8553170	102	50,183,83,180,245,100,159,80,153,172,241,145,118,176,228,166,235,189,95,257,135,197,128,110,150,94,170,234,222,338,184,405,153,141,183,151,154,55,105,219,977,151,73,58,171,144,215,165,180,123,130,126,92,174,165,257,47,171,131,146,95,53,211,171,80,170,47,192,171,201,97,200,167,131,224,42,156,210,168,132,247,153,47,336,168,131,125,47,279,160,117,139,203,128,143,47,217,96,61,131,155,156,	0,304,893,1142,1567,1904,2739,2986,3492,3918,4196,4737,6140,6805,7065,7469,7859,8786,9089,9442,10047,11327,11625,11820,12279,12525,12710,13123,13559,14241,14977,15260,15775,16024,16257,16537,17268,17524,18752,19169,19497,20554,21230,22026,23792,24245,25699,25998,26905,27185,27433,27646,27954,29369,29852,30693,32216,32442,33000,33347,34873,35623,35869,36224,36519,37588,38292,38430,38732,39133,39647,39848,40330,41576,41859,42414,42610,43264,43675,44608,44834,45355,45583,45820,46470,47310,47682,48044,48352,48923,49233,49758,50033,50408,50637,50871,51727,52596,52894,55093,56726,57768,
#Deleted in new
chr7	149776434	149783291	chr7:149776434-149783291	0	+	149776434	149776434	8553170	4	94,159,118,185,	0,2346,5747,6672,
#Deleted in new
chr7	149783270	149784316	chr7:149783270-149784316	0	+	149783270	149783270	8553170	3	64,166,416,	0,240,630,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr7	149786219	149799082	chr7:149786219-149799082	0	+	149786219	149786219	8553170	22	1346,128,110,150,94,170,234,222,338,184,405,153,141,183,151,154,55,105,219,977,151,1811,	0,1447,1642,2101,2347,2532,2945,3381,4063,4799,5082,5597,5846,6079,6359,7090,7346,8574,8991,9319,10376,11052,
#Deleted in new
chr7	149810914	149812635	chr7:149810914-149812635	0	+	149810914	149810914	8553170	4	95,53,171,75,	0,750,1351,1646,
#Deleted in new
chr7	149822143	149827891	chr7:149822143-149827891	0	+	149822143	149822143	8553170	4	54,125,117,123,	0,1580,3131,5625,
#Deleted in new
chr7	149822143	149827891	chr7:149822143-149827891	0	+	149822143	149822143	8553170	4	54,117,203,123,	0,3131,3931,5625,
#Deleted in new
chr7	149822143	149827891	chr7:149822143-149827891	0	+	149822143	149822143	8553170	11	54,131,125,47,279,160,117,139,203,128,123,	0,1208,1580,1942,2250,2821,3131,3656,3931,4306,5625,
#Partially deleted in new
chr7	149824252	149833979	chr7:149824252-149833979	0	+	149824252	149824252	8553170	10	872,117,139,203,1536,96,61,131,151,173,	0,1022,1547,1822,2197,4385,4683,6882,8515,9554,
#Partially deleted in new
chr7	149824561	149833978	chr7:149824561-149833978	0	+	149824561	149824561	8553170	12	111,160,117,139,203,128,1073,96,61,131,151,172,	0,403,713,1238,1513,1888,2351,4076,4374,6573,8206,9245,
#Partially deleted in new
chr7	149838366	149867479	chr7:149838366-149867479	3	+	149838611	149864284	789624	8	269,112,105,698,178,105,2112,3371,	0,6258,7784,9368,11794,21055,22016,25742,
#Partially deleted in new
chr7	149838374	149848024	chr7:149838374-149848024	0	+	149847745	149848024	789624	4	87,112,105,290,	0,6250,7776,9360,
#Partially deleted in new
chr7	149838374	149845091	chr7:149838374-149845091	0	+	149838374	149838374	8553170	2	87,467,	0,6250,
#Partially deleted in new
chr7	149848126	149850887	chr7:149848126-149850887	0	+	149848126	149848126	8553170	2	306,727,	0,2034,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	149850193	149852742	chr7:149850193-149852742	0	+	149850193	149850193	8553170	2	145,188,	0,2361,
#Deleted in new
chr7	149851571	149852170	chr7:149851571-149852170	3	+	149851571	149851571	8553170	1	599,	0,
#Partially deleted in new
chr7	149855973	149860450	chr7:149855973-149860450	0	+	149855973	149855973	8553170	3	388,105,68,	0,3448,4409,
#Deleted in new
chr7	149858399	149862492	chr7:149858399-149862492	3	-	149858399	149858399	8553170	1	4093,	0,
#Partially deleted in new
chr7	149867696	149873842	chr7:149867696-149873842	0	-	149867696	149867696	8553170	3	2162,155,619,	0,3945,5527,
#Partially deleted in new
chr7	149867772	149873845	chr7:149867772-149873845	3	-	149867772	149867772	789624	4	2086,110,155,622,	0,2469,3869,5451,
#Partially deleted in new
chr7	149870297	149880610	chr7:149870297-149880610	0	-	149870297	149870297	8553170	3	54,155,242,	0,1344,10071,
#Partially deleted in new
chr7	149872967	149880689	chr7:149872967-149880689	1	+	149873918	149879677	789624	3	1202,48,1355,	0,2630,6367,
#Partially deleted in new
chr7	149872967	149880693	chr7:149872967-149880693	1	+	149873918	149878771	789624	4	1202,48,113,1359,	0,2630,5710,6367,
#Partially deleted in new
chr7	149872967	149880649	chr7:149872967-149880649	1	+	149873918	149879677	789624	3	1202,48,1315,	0,2630,6367,
#Partially deleted in new
chr7	149872967	149880698	chr7:149872967-149880698	3	+	149873918	149878771	789624	4	1202,48,113,1364,	0,2630,5710,6367,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	149873600	149891204	chr7:149873600-149891204	0	+	149873918	149878771	8553170	5	569,48,113,137,3279,	0,1997,5077,8915,14325,
#Partially deleted in new
chr7	149873975	149879357	chr7:149873975-149879357	0	+	149874065	149876060	789624	5	194,48,117,113,23,	0,1622,1997,4702,5359,
#Partially deleted in new
chr7	149873975	149880689	chr7:149873975-149880689	1	+	149874065	149879677	789624	4	194,48,69,1355,	0,1622,4702,5359,
#Partially deleted in new
chr7	149873986	149880696	chr7:149873986-149880696	0	+	149874065	149878771	789624	5	183,48,113,60,1362,	0,1611,4691,5179,5348,
#Partially deleted in new
chr7	149873986	149879996	chr7:149873986-149879996	1	+	149874065	149879677	789624	3	183,48,662,	0,1611,5348,
#Partially deleted in new
chr7	149873992	149878965	chr7:149873992-149878965	1	+	149874065	149878771	789624	3	177,48,288,	0,1605,4685,
#Partially deleted in new
chr7	149874042	149880695	chr7:149874042-149880695	1	+	149874065	149878771	789624	4	127,48,113,1361,	0,1555,4635,5292,
#Partially deleted in new
chr7	149874595	149879622	chr7:149874595-149879622	0	+	149874595	149874595	8553170	4	26,48,113,288,	0,1002,4082,4739,
#Partially deleted in new
chr7	149874803	149879542	chr7:149874803-149879542	0	+	149874803	149874803	8553170	4	132,48,113,208,	0,794,3874,4531,
#Partially deleted in new
chr7	149874803	149879512	chr7:149874803-149879512	0	+	149874803	149874803	8553170	4	230,48,113,178,	0,794,3874,4531,
#Deleted in new
chr7	149881358	149881580	chr7:149881358-149881580	3	-	149881358	149881358	8553170	1	222,	0,
#Deleted in new
chr7	149881476	149882105	chr7:149881476-149882105	3	+	149881476	149881476	8553170	1	629,	0,
#Deleted in new
chr7	149890738	149891416	chr7:149890738-149891416	3	+	149890738	149890738	8553170	1	678,	0,
#Partially deleted in new
chr7	149891190	149909704	chr7:149891190-149909704	7	-	149891190	149891190	16724991	3	111,125,55,	0,1083,18459,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	150000751	150005124	chr7:150000751-150005124	3	+	150000751	150000751	8553170	2	2327,717,	0,3656,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	150041362	150045092	chr7:150041362-150045092	1	+	150041362	150041362	8553170	2	99,343,	0,3387,
#Deleted in new
chr7	150047608	150047854	chr7:150047608-150047854	7	-	150047608	150047608	16724991	1	246,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	150062088	150074376	chr7:150062088-150074376	1	+	150062088	150062088	8553170	3	171,123,404,	0,11528,11884,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	150243915	150323573	chr7:150243915-150323573	0	-	150248985	150323573	789624	6	5139,93,174,144,42,105,	0,40837,42451,45534,51390,79553,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	150243918	150249060	chr7:150243918-150249060	1	-	150248985	150249060	789624	1	5142,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	150247212	150302980	chr7:150247212-150302980	3	-	150248985	150295296	789624	8	357,107,93,174,144,108,96,139,	0,1735,37540,39154,42237,46099,48039,55629,
#Partially deleted in new
chr7	150284746	150295296	chr7:150284746-150295296	1	-	150284746	150295296	789624	5	99,174,144,108,45,	0,1620,4703,8565,10505,
#Partially deleted in new
chr7	150286467	150323725	chr7:150286467-150323725	0	-	150286467	150323714	789624	5	73,144,108,96,257,	0,2982,6844,8784,37001,
#Partially deleted in new
chr7	150293311	150323163	chr7:150293311-150323163	0	-	150293311	150295296	789624	3	108,96,298,	0,1940,29554,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	150322638	150325919	chr7:150322638-150325919	0	+	150322638	150322638	8553170	2	574,79,	0,3202,
#Partially deleted in new
chr7	150323215	150328786	chr7:150323215-150328786	0	+	150323215	150323215	8553170	3	345,170,152,	0,2625,5419,
#Partially deleted in new
chr7	150323262	150338103	chr7:150323262-150338103	1	+	150336861	150337641	789624	2	298,1386,	0,13455,
#Partially deleted in new
chr7	150323286	150338150	chr7:150323286-150338150	3	+	150336861	150337641	789624	3	274,170,1433,	0,2554,13431,
#Partially deleted in new
chr7	150323290	150337672	chr7:150323290-150337672	1	+	150336861	150337641	789624	4	270,61,170,955,	0,1067,2550,13427,
#Deleted in new
chr7	150329788	150332721	chr7:150329788-150332721	3	+	150330404	150331115	789624	1	2933,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	150337482	150343346	chr7:150337482-150343346	3	+	150337482	150337482	8553170	2	117,1176,	0,4688,
#Deleted in new
chr7	150338316	150341660	chr7:150338316-150341660	0	-	150338316	150338316	8553170	4	123,127,96,1561,	0,298,669,1783,
#Deleted in new
chr7	150338318	150341674	chr7:150338318-150341674	3	-	150338624	150340609	789624	6	121,127,96,105,194,97,	0,296,667,1781,2117,3259,
#Deleted in new
chr7	150338336	150341662	chr7:150338336-150341662	0	-	150338336	150340609	789624	5	103,96,105,194,85,	0,649,1763,2099,3241,
#Deleted in new
chr7	150338357	150341643	chr7:150338357-150341643	1	-	150338624	150340609	789624	5	82,127,96,105,1208,	0,257,628,1742,2078,
#Deleted in new
chr7	150338624	150341660	chr7:150338624-150341660	1	-	150338624	150340609	789624	5	117,96,105,194,51,	0,361,1475,1811,2985,
#Deleted in new
chr7	150341770	150342607	chr7:150341770-150342607	0	+	150341770	150341770	8553170	1	837,	0,
#Partially deleted in new
chr7	150363776	150372590	chr7:150363776-150372590	3	-	150363776	150363776	8553170	3	401,78,98,	0,7301,8716,
#Deleted in new
chr7	150368188	150371680	chr7:150368188-150371680	0	+	150371241	150371680	789624	2	130,453,	0,3039,
#Deleted in new
chr7	150368228	150370044	chr7:150368228-150370044	0	+	150368228	150368228	8553170	2	90,374,	0,1442,
#Deleted in new
chr7	150368271	150374039	chr7:150368271-150374039	1	+	150369711	150371356	789624	4	47,198,125,2812,	0,1399,2488,2956,
#Deleted in new
chr7	150368789	150374044	chr7:150368789-150374044	1	+	150371241	150372945	789624	4	152,198,125,2817,	0,881,1970,2438,
#Deleted in new
chr7	150368789	150374044	chr7:150368789-150374044	3	+	150371241	150372945	789624	2	152,2817,	0,2438,
#Partially deleted in new
chr7	150368789	150396915	chr7:150368789-150396915	3	+	150388470	150396915	789624	3	152,80,403,	0,19632,27723,
#Deleted in new
chr7	150368791	150372099	chr7:150368791-150372099	1	+	150368902	150371356	789624	2	150,872,	0,2436,
#Deleted in new
chr7	150368799	150372945	chr7:150368799-150372945	1	+	150369711	150372945	789624	3	142,198,1718,	0,871,2428,
#Deleted in new
chr7	150368808	150372162	chr7:150368808-150372162	0	+	150368902	150372162	789624	3	133,127,932,	0,933,2422,
#Deleted in new
chr7	150368809	150370602	chr7:150368809-150370602	0	+	150368809	150368809	8553170	2	132,932,	0,861,
#Deleted in new
chr7	150368811	150371803	chr7:150368811-150371803	1	+	150369711	150371356	789624	4	130,198,125,576,	0,859,1948,2416,
#Deleted in new
chr7	150368821	150372242	chr7:150368821-150372242	0	+	150368902	150372242	789624	3	120,127,1015,	0,920,2406,
#Deleted in new
chr7	150368825	150370134	chr7:150368825-150370134	0	+	150368825	150368825	8553170	2	208,464,	0,845,
#Deleted in new
chr7	150368839	150371632	chr7:150368839-150371632	0	+	150368902	150369703	789624	4	174,198,125,402,	0,831,1920,2391,
#Deleted in new
chr7	150368844	150370411	chr7:150368844-150370411	0	+	150368844	150368844	8553170	2	169,741,	0,826,
#Deleted in new
chr7	150368870	150371542	chr7:150368870-150371542	1	+	150368902	150371507	789624	2	163,315,	0,2357,
#Deleted in new
chr7	150368896	150371392	chr7:150368896-150371392	0	+	150368902	150369703	789624	3	117,198,165,	0,774,2331,
#Deleted in new
chr7	150369379	150371557	chr7:150369379-150371557	0	+	150369379	150369379	8553170	2	291,330,	0,1848,
#Deleted in new
chr7	150369643	150371655	chr7:150369643-150371655	0	+	150369711	150370820	789624	3	225,171,428,	0,1070,1584,
#Deleted in new
chr7	150371163	150374039	chr7:150371163-150374039	1	+	150371241	150372945	789624	1	2876,	0,
#Partially deleted in new
chr7	150379328	150410597	chr7:150379328-150410597	0	+	150379328	150379328	8553170	3	64,80,438,	0,9093,30831,
#Partially deleted in new
chr7	150379334	150398631	chr7:150379334-150398631	3	+	150388470	150398095	789624	3	58,80,2119,	0,9087,17178,
#Partially deleted in new
chr7	150379853	150383885	chr7:150379853-150383885	3	-	150379853	150379853	8553170	2	335,85,	0,3947,
#Partially deleted in new
chr7	150382695	150396979	chr7:150382695-150396979	0	+	150388470	150396979	789624	3	128,80,467,	0,5726,13817,
#Partially deleted in new
chr7	150382716	150410557	chr7:150382716-150410557	3	+	150382716	150382716	8553170	3	107,80,398,	0,5705,27443,
#Partially deleted in new
chr7	150400701	150412470	chr7:150400701-150412470	2	+	150400701	150400701	8553170	2	271,2311,	0,9458,
#Partially deleted in new
chr7	150404485	150410548	chr7:150404485-150410548	0	+	150404485	150404485	8553170	2	187,389,	0,5674,
#Partially deleted in new
chr7	150404863	150410264	chr7:150404863-150410264	0	+	150404863	150404863	8553170	2	454,105,	0,5296,
#Partially deleted in new
chr7	150405145	150410249	chr7:150405145-150410249	1	+	150407611	150408223	789624	3	172,905,90,	0,2438,5014,
#Partially deleted in new
chr7	150405441	150410363	chr7:150405441-150410363	1	+	150407611	150410192	789624	3	37,280,204,	0,2142,4718,
#Partially deleted in new
chr7	150405736	150408274	chr7:150405736-150408274	1	+	150407611	150408223	789624	2	168,691,	0,1847,
#Partially deleted in new
chr7	150405773	150410599	chr7:150405773-150410599	0	+	150405773	150405773	8553170	2	131,440,	0,4386,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	150433653	150448140	chr7:150433653-150448140	3	+	150433653	150433653	789624	4	176,612,190,1065,	0,8895,13046,13422,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	150433729	150442892	chr7:150433729-150442892	0	+	150433729	150433729	8553170	3	100,128,344,	0,1300,8819,
#Partially deleted in new
chr7	150450629	150479392	chr7:150450629-150479392	3	+	150466698	150477780	789624	5	546,664,46,627,2301,	0,16041,20199,23382,26462,
#Deleted in new
chr7	150484060	150485135	chr7:150484060-150485135	7	-	150484060	150484060	16724991	1	1075,	0,
#Partially deleted in new
chr7	150512558	150513839	chr7:150512558-150513839	7	-	150512558	150512558	16724991	1	1281,	0,
#Partially deleted in new
chr7	150514829	150521073	chr7:150514829-150521073	3	+	150519974	150520877	0	2	116,1140,	0,5104,
#Partially deleted in new
chr7	150541753	150542098	chr7:150541753-150542098	7	-	150541753	150541753	16724991	1	345,	0,
#Partially deleted in new
chr7	150567276	150573955	chr7:150567276-150573955	3	+	150569901	150573060	0	3	161,72,1827,	0,2611,4852,
#Partially deleted in new
chr7	150567368	150573514	chr7:150567368-150573514	1	+	150569901	150573060	789624	3	69,114,1386,	0,2519,4760,
#Partially deleted in new
chr7	150567389	150572938	chr7:150567389-150572938	0	+	150567389	150567389	8553170	2	48,810,	0,4739,
#Partially deleted in new
chr7	150567395	150572533	chr7:150567395-150572533	0	+	150567395	150567395	8553170	3	42,122,405,	0,2492,4733,
#Partially deleted in new
chr7	150567435	150572481	chr7:150567435-150572481	0	+	150569901	150572481	789624	3	85,114,353,	0,2452,4693,
#Partially deleted in new
chr7	150603560	150604644	chr7:150603560-150604644	7	-	150603560	150603560	16724991	1	1084,	0,
#Deleted in new
chr7	150614060	150614764	chr7:150614060-150614764	7	-	150614060	150614060	16724991	1	704,	0,
#Deleted in new
chr7	150625374	150632385	chr7:150625374-150632385	3	-	150627718	150630142	789624	3	3138,85,217,	0,4683,6794,
#Deleted in new
chr7	150625377	150632648	chr7:150625377-150632648	1	-	150627718	150630142	789624	3	3345,85,480,	0,4680,6791,
#Deleted in new
chr7	150627675	150632346	chr7:150627675-150632346	1	-	150628184	150630142	789624	3	613,85,178,	0,2382,4493,
#Deleted in new
chr7	150676832	150677918	chr7:150676832-150677918	7	-	150676832	150676832	16724991	4	75,105,150,105,	0,459,678,981,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	150685696	150687518	chr7:150685696-150687518	0	+	150685696	150685696	8553170	2	89,467,	0,1355,
#Partially deleted in new
chr7	150685699	150693641	chr7:150685699-150693641	3	+	150687059	150693300	0	3	86,36,1327,	0,1352,6615,
#Partially deleted in new
chr7	150685726	150689702	chr7:150685726-150689702	1	+	150687059	150689592	789624	3	59,36,214,	0,1325,3762,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	150716556	150724284	chr7:150716556-150724284	3	+	150719047	150720925	0	3	134,49,4237,	0,2485,3491,
#Deleted in new
chr7	150716605	150719516	chr7:150716605-150719516	0	+	150716605	150716605	8553170	2	85,475,	0,2436,
#Partially deleted in new
chr7	150716667	150743646	chr7:150716667-150743646	3	+	150719047	150743063	789624	6	23,49,359,204,49,1464,	0,2374,3380,20837,24211,25515,
#Partially deleted in new
chr7	150722252	150743646	chr7:150722252-150743646	3	+	150740884	150743063	789624	4	118,204,49,1464,	0,15252,18626,19930,
#Partially deleted in new
chr7	150737347	150744063	chr7:150737347-150744063	1	+	150740884	150743063	789624	3	361,49,1881,	0,3531,4835,
#Partially deleted in new
chr7	150737608	150743615	chr7:150737608-150743615	0	+	150737608	150737608	8553170	2	100,1424,	0,4583,
#Partially deleted in new
chr7	150737609	150743646	chr7:150737609-150743646	0	+	150737609	150737609	8553170	2	3318,1464,	0,4573,
#Partially deleted in new
chr7	150737626	150750033	chr7:150737626-150750033	0	+	150737626	150737626	8553170	4	82,49,150,302,	0,3252,10087,12105,
#Deleted in new
chr7	150737651	150740504	chr7:150737651-150740504	0	+	150737651	150737651	8553170	2	57,488,	0,2365,
#Partially deleted in new
chr7	150740234	150742517	chr7:150740234-150742517	0	+	150740234	150740234	8553170	3	269,49,335,	0,644,1948,
#Deleted in new
chr7	150746892	150747728	chr7:150746892-150747728	7	-	150746892	150746892	16724991	1	836,	0,
#Deleted in new
chr7	150749735	150750094	chr7:150749735-150750094	7	+	150749735	150749735	16724991	1	359,	0,
#Partially deleted in new
chr7	150791284	150800352	chr7:150791284-150800352	1	-	150791530	150796569	789624	8	339,120,228,57,111,209,146,55,	0,771,1803,2259,2676,5081,8737,9013,
#Partially deleted in new
chr7	150791286	150800364	chr7:150791286-150800364	1	-	150791530	150796569	789624	7	337,120,228,57,111,209,67,	0,769,1801,2257,2674,5079,9011,
#Partially deleted in new
chr7	150791286	150801360	chr7:150791286-150801360	3	-	150791530	150796569	789624	7	337,120,228,57,111,209,368,	0,769,1801,2257,2674,5079,9706,
#Partially deleted in new
chr7	150791291	150800533	chr7:150791291-150800533	1	-	150791530	150796569	789624	7	332,120,228,57,111,212,243,	0,764,1796,2252,2669,5074,8999,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	150791300	150796732	chr7:150791300-150796732	1	-	150791530	150796569	789624	6	323,120,228,57,111,367,	0,755,1787,2243,2660,5065,
#Partially deleted in new
chr7	150791301	150800367	chr7:150791301-150800367	1	-	150791530	150796569	789624	6	322,120,228,57,209,70,	0,754,1786,2242,5064,8996,
#Deleted in new
chr7	150800402	150805109	chr7:150800402-150805109	3	+	150801550	150804868	789624	7	566,189,111,57,213,111,283,	0,1133,1812,2997,3217,3959,4424,
#Deleted in new
chr7	150800542	150805120	chr7:150800542-150805120	1	+	150801550	150804868	789624	7	286,189,111,57,213,111,294,	0,993,1672,2857,3077,3819,4284,
#Deleted in new
chr7	150800787	150805118	chr7:150800787-150805118	0	+	150800787	150800787	8553170	6	41,790,57,213,111,292,	0,748,2612,2832,3574,4039,
#Deleted in new
chr7	150800797	150802289	chr7:150800797-150802289	0	+	150800797	150800797	8553170	2	171,754,	0,738,
#Deleted in new
chr7	150801533	150804936	chr7:150801533-150804936	1	+	150802217	150804868	789624	6	33,111,57,213,111,110,	0,681,1866,2086,2828,3293,
#Deleted in new
chr7	150801694	150805118	chr7:150801694-150805118	0	+	150801694	150804484	789624	6	30,111,57,213,124,292,	0,520,1705,1925,2667,3132,
#Deleted in new
chr7	150801757	150805118	chr7:150801757-150805118	0	+	150802217	150804868	789624	6	112,111,57,213,111,292,	0,457,1642,1862,2604,3069,
#Deleted in new
chr7	150802055	150805114	chr7:150802055-150805114	0	+	150802055	150802055	8553170	2	1777,288,	0,2771,
#Deleted in new
chr7	150803218	150805113	chr7:150803218-150805113	0	+	150803218	150803218	8553170	4	238,213,124,287,	0,401,1143,1608,
#Deleted in new
chr7	150803303	150805112	chr7:150803303-150805112	0	+	150803303	150803303	8553170	3	153,213,286,	0,316,1523,
#Deleted in new
chr7	150803618	150804681	chr7:150803618-150804681	0	+	150803618	150803618	8553170	2	214,320,	0,743,
#Partially deleted in new
chr7	150824626	150861504	chr7:150824626-150861504	3	+	150856470	150861209	0	7	337,155,76,1586,286,133,562,	0,2621,27488,31828,34136,35874,36316,
#Partially deleted in new
chr7	150826392	150861504	chr7:150826392-150861504	1	+	150856470	150861209	0	7	59,155,76,1586,286,133,562,	0,855,25722,30062,32370,34108,34550,
#Partially deleted in new
chr7	150852008	150857217	chr7:150852008-150857217	0	+	150856470	150857217	789624	2	182,763,	0,4446,
#Partially deleted in new
chr7	150852476	150861504	chr7:150852476-150861504	1	+	150856470	150861209	0	5	82,1586,286,133,562,	0,3978,6286,8024,8466,
#Partially deleted in new
chr7	150852514	150861289	chr7:150852514-150861289	1	+	150856470	150861209	0	5	44,1586,286,190,347,	0,3940,6248,7929,8428,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	150852518	150857482	chr7:150852518-150857482	0	+	150856470	150857482	789624	3	40,246,1028,	0,1399,3936,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	150857932	150861219	chr7:150857932-150861219	0	+	150857932	150857932	8553170	5	108,286,139,133,277,	0,830,1876,2568,3010,
#Partially deleted in new
chr7	150944960	150978315	chr7:150944960-150978315	3	-	150945364	150977913	0	15	554,178,187,273,100,194,253,200,388,429,212,444,165,231,478,	0,1916,2367,2645,3483,3895,5207,5960,6487,7464,12330,13098,14611,29750,32877,
#Deleted in new
chr7	150944960	150955906	chr7:150944960-150955906	1	-	150945364	150955503	0	11	554,178,187,273,100,194,253,200,388,429,511,	0,1916,2367,2645,3483,3895,5207,5960,6487,7464,10435,
#Partially deleted in new
chr7	150949414	150978136	chr7:150949414-150978136	0	-	150949414	150949414	8553170	9	1006,200,388,429,212,444,165,231,299,	0,1506,2033,3010,7876,8644,10157,25296,28423,
#Deleted in new
chr7	150949415	150955828	chr7:150949415-150955828	0	-	150949415	150949415	8553170	4	1005,915,429,433,	0,1505,3009,5980,
#Deleted in new
chr7	150949422	150955810	chr7:150949422-150955810	0	-	150949422	150949422	8553170	5	998,200,388,429,415,	0,1498,2025,3002,5973,
#Partially deleted in new
chr7	150949898	150978100	chr7:150949898-150978100	1	-	150949898	150974840	789624	10	522,200,388,429,212,334,104,231,95,133,	0,1022,1549,2526,7392,8160,9734,24812,27939,28069,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr7	150990994	151014588	chr7:150990994-151014588	3	+	150993803	151014169	0	27	306,209,112,149,163,92,142,140,175,102,195,74,145,105,68,117,175,133,79,188,173,211,88,122,149,195,581,	0,2758,4208,5409,5768,7362,7544,7951,8195,9503,10236,10549,10826,11205,15432,15894,16107,17935,18194,18403,19120,19602,19904,21356,22236,22729,23013,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr7	150991103	151014474	chr7:150991103-151014474	1	+	150998392	151014169	789624	24	197,112,92,142,140,175,102,195,74,145,105,68,117,175,133,79,188,173,211,88,122,149,195,467,	0,4099,7253,7435,7842,8086,9394,10127,10440,10717,11096,15323,15785,15998,17826,18085,18294,19011,19493,19795,21247,22127,22620,22904,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	150993803	151003935	chr7:150993803-151003935	1	+	150993803	151003403	0	14	158,112,149,163,92,142,140,175,102,195,74,145,105,625,	0,1399,2600,2959,4553,4735,5142,5386,6694,7427,7740,8017,8396,9507,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr7	150993803	151003935	chr7:150993803-151003935	1	+	150993803	151003288	0	14	158,112,149,163,92,142,140,175,102,195,74,145,105,785,	0,1399,2600,2959,4553,4735,5142,5386,6694,7427,7740,8017,8396,9347,
#Deleted in new
chr7	151001866	151002963	chr7:151001866-151002963	0	+	151001866	151001866	8553170	3	99,105,128,	0,333,969,
#Deleted in new
chr7	151008873	151009570	chr7:151008873-151009570	0	+	151008873	151008873	8553170	3	189,79,173,	0,315,524,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	151008936	151012065	chr7:151008936-151012065	0	+	151008936	151011842	789624	7	126,79,188,173,211,88,278,	0,252,461,1178,1660,1962,2851,
#Partially deleted in new
chr7	151010519	151013378	chr7:151010519-151013378	0	+	151010519	151010519	8553170	3	467,122,148,	0,1831,2711,
#Partially deleted in new
chr7	151010532	151014289	chr7:151010532-151014289	0	+	151010532	151010532	8553170	6	275,88,122,149,195,282,	0,366,1818,2698,3191,3475,
#Partially deleted in new
chr7	151012208	151012785	chr7:151012208-151012785	0	-	151012208	151012208	8553170	2	242,160,	0,417,
#Partially deleted in new
chr7	151012213	151024499	chr7:151012213-151024499	0	-	151015895	151024423	789624	17	1195,183,208,121,142,127,97,134,237,180,154,755,142,162,65,44,626,	0,1516,1868,2789,3668,3895,4217,4474,4822,5657,6080,6406,8974,10831,11231,11473,11660,
#Partially deleted in new
chr7	151012246	151024499	chr7:151012246-151024499	3	-	151015895	151024423	789624	17	1162,183,208,121,142,127,97,134,237,180,154,755,142,162,65,44,626,	0,1483,1835,2756,3635,3862,4184,4441,4789,5624,6047,6373,8941,10798,11198,11440,11627,
#Partially deleted in new
chr7	151012405	151013529	chr7:151012405-151013529	0	+	151012405	151012405	8553170	2	67,299,	0,825,
#Partially deleted in new
chr7	151013237	151024465	chr7:151013237-151024465	0	-	151013237	151013237	789624	18	171,183,208,178,354,142,127,97,134,237,180,154,142,162,65,44,154,45,	0,492,844,1708,2122,2644,2871,3193,3450,3798,4633,5056,7950,9807,10207,10449,10636,11183,
#Partially deleted in new
chr7	151013294	151014304	chr7:151013294-151014304	0	-	151013294	151013294	8553170	2	114,575,	0,435,
#Partially deleted in new
chr7	151013853	151015589	chr7:151013853-151015589	0	-	151013853	151013853	8553170	4	59,208,178,172,	0,228,1092,1564,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	151014870	151015996	chr7:151014870-151015996	0	-	151014870	151014870	8553170	2	253,115,	0,1011,
#Partially deleted in new
chr7	151015171	151018801	chr7:151015171-151018801	0	-	151015171	151015171	8553170	9	542,142,127,97,134,237,180,154,182,	0,710,937,1259,1516,1864,2699,3122,3448,
#Partially deleted in new
chr7	151015181	151024423	chr7:151015181-151024423	1	-	151015895	151024423	789624	13	842,127,97,134,237,180,154,755,142,162,65,44,550,	0,927,1249,1506,1854,2689,3112,3438,6006,7863,8263,8505,8692,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	151019836	151024499	chr7:151019836-151024499	0	-	151019836	151019836	8553170	6	511,142,162,65,44,626,	0,1351,3208,3608,3850,4037,
#Partially deleted in new
chr7	151020917	151023516	chr7:151020917-151023516	0	-	151020917	151020917	8553170	3	412,162,72,	0,2127,2527,
#Partially deleted in new
chr7	151021187	151024494	chr7:151021187-151024494	0	-	151021187	151021187	8553170	6	142,162,65,44,123,74,	0,1857,2257,2499,2686,3233,
#Partially deleted in new
chr7	151028421	151047782	chr7:151028421-151047782	1	+	151028466	151045349	789624	15	189,156,95,106,162,86,98,106,34,137,95,134,148,251,2574,	0,5851,6083,6302,7159,7460,7651,8122,11846,12076,12406,12677,13539,15549,16787,
#Partially deleted in new
chr7	151028422	151047782	chr7:151028422-151047782	3	+	151028515	151045349	789624	16	188,313,156,95,106,162,86,98,106,34,137,95,134,148,251,2574,	0,5182,5850,6082,6301,7158,7459,7650,8121,11845,12075,12405,12676,13538,15548,16786,
#Partially deleted in new
chr7	151028422	151033842	chr7:151028422-151033842	0	+	151028515	151033842	789624	3	188,111,238,	0,378,5182,
#Partially deleted in new
chr7	151028425	151045409	chr7:151028425-151045409	0	+	151028515	151034297	789624	15	185,156,95,106,162,86,98,106,34,137,95,134,148,251,201,	0,5847,6079,6298,7155,7456,7647,8118,11842,12072,12402,12673,13535,15545,16783,
#Partially deleted in new
chr7	151028436	151033750	chr7:151028436-151033750	0	+	151028436	151028436	8553170	2	416,146,	0,5168,
#Partially deleted in new
chr7	151028437	151034551	chr7:151028437-151034551	0	+	151028515	151033613	789624	5	173,73,313,156,47,	0,342,5167,5835,6067,
#Partially deleted in new
chr7	151028449	151045562	chr7:151028449-151045562	1	+	151028515	151045349	789624	17	161,51,313,156,95,106,162,86,98,106,34,137,95,134,148,251,354,	0,2791,5155,5823,6055,6274,7131,7432,7623,8094,11818,12048,12378,12649,13511,15521,16759,
#Partially deleted in new
chr7	151028449	151033242	chr7:151028449-151033242	0	+	151028449	151028449	8553170	2	161,399,	0,4394,
#Partially deleted in new
chr7	151028449	151045562	chr7:151028449-151045562	0	+	151028515	151034297	789624	14	161,327,106,162,86,98,106,34,137,95,134,148,251,354,	0,5823,6274,7131,7432,7623,8094,11818,12048,12378,12649,13511,15521,16759,
#Partially deleted in new
chr7	151028449	151034599	chr7:151028449-151034599	0	+	151028449	151028449	8553170	4	161,162,156,95,	0,4993,5823,6055,
#Partially deleted in new
chr7	151028449	151042030	chr7:151028449-151042030	0	+	151028515	151032895	789624	10	161,218,95,106,590,106,147,95,134,70,	0,4394,6055,6274,7131,8094,12048,12378,12649,13511,
#Partially deleted in new
chr7	151028449	151033034	chr7:151028449-151033034	0	+	151028449	151028449	8553170	4	161,132,51,191,	0,330,2791,4394,
#Partially deleted in new
chr7	151028461	151045563	chr7:151028461-151045563	1	+	151028515	151045349	789624	16	149,313,156,95,106,162,86,98,106,34,137,95,134,148,176,355,	0,5143,5811,6043,6262,7119,7420,7611,8082,11806,12036,12366,12637,13499,15509,16747,
#Partially deleted in new
chr7	151028463	151037524	chr7:151028463-151037524	1	+	151028515	151037181	789624	10	147,313,156,95,106,162,86,98,106,356,	0,5141,5809,6041,6260,7117,7418,7609,8080,8705,
#Partially deleted in new
chr7	151028466	151037570	chr7:151028466-151037570	1	+	151028515	151037319	789624	10	144,313,156,95,106,162,86,98,106,330,	0,5138,5806,6038,6257,7114,7415,7606,8077,8774,
#Partially deleted in new
chr7	151028472	151031626	chr7:151028472-151031626	0	+	151028472	151028472	8553170	2	138,386,	0,2768,
#Partially deleted in new
chr7	151028475	151033698	chr7:151028475-151033698	0	+	151028475	151028475	8553170	2	512,94,	0,5129,
#Partially deleted in new
chr7	151028475	151034547	chr7:151028475-151034547	0	+	151028515	151032895	789624	4	135,218,156,43,	0,4368,5797,6029,
#Partially deleted in new
chr7	151028656	151033060	chr7:151028656-151033060	0	+	151028656	151028656	8553170	3	255,51,217,	0,2584,4187,
#Deleted in new
chr7	151032929	151034597	chr7:151032929-151034597	0	+	151032929	151032929	8553170	4	132,313,156,93,	0,675,1343,1575,
#Deleted in new
chr7	151035618	151037586	chr7:151035618-151037586	0	+	151035618	151037290	789624	5	124,86,98,106,303,	0,263,454,925,1665,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	151037687	151045562	chr7:151037687-151045562	0	+	151037687	151037687	8553170	7	2614,147,95,134,148,251,354,	0,2810,3140,3411,4273,6283,7521,
#Partially deleted in new
chr7	151048291	151052753	chr7:151048291-151052753	1	+	151048885	151052747	789624	10	1128,151,128,196,57,148,92,80,72,180,	0,1814,2189,2466,2747,2880,3518,3691,3874,4282,
#Partially deleted in new
chr7	151048517	151052754	chr7:151048517-151052754	0	+	151048885	151052048	789624	9	902,151,128,196,57,92,80,309,181,	0,1588,1963,2240,2521,3292,3465,3648,4056,
#Partially deleted in new
chr7	151048687	151052753	chr7:151048687-151052753	3	+	151048885	151052652	789624	11	732,151,128,196,57,148,92,80,72,59,180,	0,1418,1793,2070,2351,2484,3122,3295,3478,3728,3886,
#Partially deleted in new
chr7	151048766	151052753	chr7:151048766-151052753	0	+	151048885	151052048	789624	10	653,151,128,196,57,92,80,72,59,180,	0,1339,1714,1991,2272,3043,3216,3399,3649,3807,
#Partially deleted in new
chr7	151048885	151052754	chr7:151048885-151052754	1	+	151048885	151052686	789624	11	534,151,128,196,57,148,92,80,72,59,201,	0,1220,1595,1872,2153,2286,2924,3097,3280,3530,3668,
#Deleted in new
chr7	151050077	151050864	chr7:151050077-151050864	0	+	151050077	151050077	8553170	2	179,384,	0,403,
#Partially deleted in new
chr7	151050919	151052754	chr7:151050919-151052754	0	+	151050919	151052686	789624	7	34,57,92,80,72,59,108,	0,119,890,1063,1246,1496,1727,
#Partially deleted in new
chr7	151051212	151052756	chr7:151051212-151052756	0	+	151051212	151052686	789624	6	107,92,80,72,59,110,	0,597,770,953,1203,1434,
#Partially deleted in new
chr7	151051233	151052732	chr7:151051233-151052732	0	+	151051233	151051233	8553170	4	86,92,80,567,	0,576,749,932,
#Deleted in new
chr7	151053811	151058530	chr7:151053811-151058530	3	-	151054008	151057848	0	12	284,81,61,70,97,75,96,57,61,68,89,719,	0,400,593,1215,1465,1720,1941,2768,2924,3096,3260,4000,
#Deleted in new
chr7	151054008	151057848	chr7:151054008-151057848	1	-	151054008	151057848	0	11	87,81,61,70,97,75,57,61,68,89,37,	0,203,396,1018,1268,1523,2571,2727,2899,3063,3803,
#Deleted in new
chr7	151055298	151057744	chr7:151055298-151057744	0	-	151055298	151055298	8553170	8	75,75,96,57,61,68,89,401,	0,233,454,1281,1437,1609,1773,2045,
#Deleted in new
chr7	151055488	151056360	chr7:151055488-151056360	0	-	151055488	151055488	8553170	2	118,608,	0,264,
#Deleted in new
chr7	151056565	151057894	chr7:151056565-151057894	0	-	151056565	151056565	8553170	3	410,89,83,	0,506,1246,
#Partially deleted in new
chr7	151057209	151064744	chr7:151057209-151064744	0	+	151061987	151064744	789624	4	72,114,166,219,	0,4715,6992,7316,
#Deleted in new
chr7	151058199	151061960	chr7:151058199-151061960	0	+	151058199	151058199	8553170	2	512,36,	0,3725,
#Partially deleted in new
chr7	151058211	151076526	chr7:151058211-151076526	3	+	151061987	151076367	789624	23	977,114,166,242,119,245,143,181,136,166,115,185,226,216,149,195,255,90,167,254,170,174,240,	0,3713,5990,6314,6636,8305,8639,9662,11735,11969,12245,12515,12860,13178,13477,13730,15827,16187,16463,17043,17394,17801,18075,
#Partially deleted in new
chr7	151059569	151076527	chr7:151059569-151076527	1	+	151061987	151076367	789624	23	193,114,166,242,119,245,143,181,136,166,115,185,226,216,149,195,255,90,167,254,170,174,241,	0,2355,4632,4956,5278,6947,7281,8304,10377,10611,10887,11157,11502,11820,12119,12372,14469,14829,15105,15685,16036,16443,16717,
#Partially deleted in new
chr7	151059590	151064697	chr7:151059590-151064697	0	+	151059590	151059590	8553170	3	172,114,496,	0,2334,4611,
#Partially deleted in new
chr7	151060069	151064895	chr7:151060069-151064895	0	+	151061987	151064895	789624	5	132,114,166,242,48,	0,1855,4132,4456,4778,
#Partially deleted in new
chr7	151061216	151064691	chr7:151061216-151064691	0	+	151061987	151064691	789624	4	54,114,166,166,	0,708,2985,3309,
#Partially deleted in new
chr7	151061243	151064760	chr7:151061243-151064760	0	+	151061987	151064760	789624	4	278,114,166,235,	0,681,2958,3282,
#Partially deleted in new
chr7	151061588	151064361	chr7:151061588-151064361	0	+	151061987	151064361	789624	2	450,160,	0,2613,
#Partially deleted in new
chr7	151062546	151076522	chr7:151062546-151076522	1	+	151062639	151076367	789624	22	117,166,242,119,245,143,181,136,166,115,185,226,216,149,195,255,90,167,254,170,174,236,	0,1655,1979,2301,3970,4304,5327,7400,7634,7910,8180,8525,8843,9142,9395,11492,11852,12128,12708,13059,13466,13740,
#Partially deleted in new
chr7	151062633	151076523	chr7:151062633-151076523	1	+	151063180	151076367	789624	22	556,166,242,119,245,143,181,136,166,115,185,226,216,149,195,255,90,167,254,170,174,237,	0,1568,1892,2214,3883,4217,5240,7313,7547,7823,8093,8438,8756,9055,9308,11405,11765,12041,12621,12972,13379,13653,
#Deleted in new
chr7	151070353	151071132	chr7:151070353-151071132	0	+	151070353	151070353	8553170	3	218,185,61,	0,373,718,
#Deleted in new
chr7	151070516	151071167	chr7:151070516-151071167	0	+	151070516	151070516	8553170	2	55,441,	0,210,
#Deleted in new
chr7	151070716	151071601	chr7:151070716-151071601	0	+	151070716	151070716	8553170	2	581,212,	0,673,
#Deleted in new
chr7	151071476	151072136	chr7:151071476-151072136	0	+	151071476	151071476	8553170	2	361,195,	0,465,
#Partially deleted in new
chr7	151071664	151074117	chr7:151071664-151074117	0	+	151071664	151071664	8553170	2	472,79,	0,2374,
#Partially deleted in new
chr7	151071728	151074085	chr7:151071728-151074085	0	+	151071728	151071728	8553170	3	109,195,79,	0,213,2278,
#Partially deleted in new
chr7	151072003	151075312	chr7:151072003-151075312	0	+	151072003	151072003	8553170	3	133,803,58,	0,2035,3251,
#Deleted in new
chr7	151074741	151076530	chr7:151074741-151076530	3	-	151074741	151074741	8553170	2	695,535,	0,1254,
#Deleted in new
chr7	151075982	151076524	chr7:151075982-151076524	0	+	151075982	151075982	8553170	2	204,238,	0,304,
#Deleted in new
chr7	151076592	151080795	chr7:151076592-151080795	1	-	151076774	151080766	789624	9	210,79,92,160,214,140,180,423,111,	0,565,717,1028,1286,1969,2249,2907,4092,
#Deleted in new
chr7	151076623	151080794	chr7:151076623-151080794	0	-	151076623	151076623	8553170	9	209,115,136,92,160,214,140,99,586,	0,289,477,686,997,1255,1938,2299,3585,
#Deleted in new
chr7	151076625	151080844	chr7:151076625-151080844	3	-	151076724	151080766	789624	10	207,115,136,92,160,214,140,180,423,160,	0,287,475,684,995,1253,1936,2216,2874,4059,
#Deleted in new
chr7	151076625	151080842	chr7:151076625-151080842	1	-	151076724	151080766	789624	9	207,115,136,92,160,214,140,180,158,	0,287,475,684,995,1253,1936,2216,4059,
#Deleted in new
chr7	151076625	151077155	chr7:151076625-151077155	0	-	151076625	151076625	8553170	2	402,55,	0,475,
#Deleted in new
chr7	151076625	151080496	chr7:151076625-151080496	0	-	151076625	151076625	8553170	6	207,324,471,214,140,1655,	0,287,684,1253,1936,2216,
#Deleted in new
chr7	151076625	151080862	chr7:151076625-151080862	1	-	151076724	151080766	789624	10	207,115,136,92,160,214,140,99,423,178,	0,287,475,684,995,1253,1936,2297,2874,4059,
#Deleted in new
chr7	151076628	151080866	chr7:151076628-151080866	0	-	151076628	151076628	8553170	8	204,115,136,92,472,140,180,182,	0,284,472,681,992,1933,2213,4056,
#Deleted in new
chr7	151076637	151079328	chr7:151076637-151079328	0	-	151076637	151076637	8553170	5	195,868,214,140,487,	0,275,1241,1924,2204,
#Deleted in new
chr7	151076645	151080790	chr7:151076645-151080790	0	-	151076645	151076645	8553170	9	187,115,301,160,214,140,180,423,106,	0,267,455,975,1233,1916,2196,2854,4039,
#Deleted in new
chr7	151076654	151078911	chr7:151076654-151078911	0	-	151076654	151076654	8553170	7	178,324,92,160,214,140,70,	0,258,655,966,1224,1907,2187,
#Deleted in new
chr7	151076715	151079379	chr7:151076715-151079379	0	-	151076715	151076715	8553170	4	117,1180,140,457,	0,197,1846,2207,
#Deleted in new
chr7	151076990	151077512	chr7:151076990-151077512	0	-	151076990	151076990	8553170	2	37,412,	0,110,
#Deleted in new
chr7	151077698	151079931	chr7:151077698-151079931	0	-	151077698	151077698	8553170	2	394,432,	0,1801,
#Deleted in new
chr7	151077771	151080846	chr7:151077771-151080846	0	-	151077771	151077771	8553170	4	321,138,99,162,	0,790,1151,2913,
#Deleted in new
chr7	151077874	151079049	chr7:151077874-151079049	0	-	151077874	151077874	8553170	2	218,488,	0,687,
#Deleted in new
chr7	151079497	151080829	chr7:151079497-151080829	0	-	151079497	151079497	8553170	2	425,393,	0,939,
#Deleted in new
chr7	151081079	151083546	chr7:151081079-151083546	3	-	151081548	151082563	789624	3	821,419,113,	0,1095,2354,
#Deleted in new
chr7	151081084	151083091	chr7:151081084-151083091	1	-	151081548	151082563	789624	3	816,419,328,	0,1090,1679,
#Deleted in new
chr7	151081085	151082908	chr7:151081085-151082908	1	-	151081548	151082563	789624	2	815,734,	0,1089,
#Deleted in new
chr7	151081483	151083400	chr7:151081483-151083400	1	-	151081548	151082563	789624	3	417,419,63,	0,691,1854,
#Deleted in new
chr7	151081495	151083232	chr7:151081495-151083232	1	-	151081548	151082563	789624	3	405,419,58,	0,679,1679,
#Deleted in new
chr7	151081777	151083124	chr7:151081777-151083124	0	-	151081777	151082563	789624	3	123,419,42,	0,397,1305,
#Deleted in new
chr7	151081833	151082981	chr7:151081833-151082981	0	-	151081833	151082563	789624	3	67,419,64,	0,341,1084,
#Partially deleted in new
chr7	151085830	151117776	chr7:151085830-151117776	0	+	151085830	151085830	8553170	5	230,59,88,86,141,	0,30962,31264,31540,31805,
#Partially deleted in new
chr7	151085866	151144434	chr7:151085866-151144434	1	+	151117755	151143943	0	16	143,59,88,86,142,135,128,159,93,105,169,155,91,223,256,698,	0,30926,31228,31504,31769,32343,32638,34120,37927,42713,48533,56031,56296,56545,57474,57870,
#Partially deleted in new
chr7	151086741	151144432	chr7:151086741-151144432	3	+	151086741	151143943	0	18	331,59,88,86,142,135,128,159,93,105,169,171,138,155,91,223,256,696,	0,30051,30353,30629,30894,31468,31763,33245,37052,41838,47658,51401,53237,55156,55421,55670,56599,56995,
#Partially deleted in new
chr7	151086741	151123635	chr7:151086741-151123635	1	+	151086741	151122787	0	9	331,59,88,86,142,135,128,159,911,	0,30051,30353,30629,30894,31468,31763,33245,35983,
#Partially deleted in new
chr7	151086741	151123636	chr7:151086741-151123636	1	+	151086741	151122787	789624	8	331,59,88,86,142,135,128,912,	0,30051,30353,30629,30894,31468,31763,35983,
#Partially deleted in new
chr7	151086741	151144436	chr7:151086741-151144436	1	+	151086741	151143943	0	19	45,178,59,88,86,142,135,128,159,93,105,169,171,138,155,91,223,256,700,	0,153,30051,30353,30629,30894,31468,31763,33245,37052,41838,47658,51401,53237,55156,55421,55670,56599,56995,
#Partially deleted in new
chr7	151087066	151118278	chr7:151087066-151118278	0	+	151087066	151118278	789624	6	138,59,88,86,142,69,	0,29726,30028,30304,30569,31143,
#Partially deleted in new
chr7	151089711	151118344	chr7:151089711-151118344	0	+	151089711	151089711	8553170	7	454,55,59,88,86,142,135,	0,781,27081,27383,27659,27924,28498,
#Partially deleted in new
chr7	151112183	151118333	chr7:151112183-151118333	0	+	151112183	151112183	8553170	6	61,59,88,86,142,124,	0,4609,4911,5187,5452,6026,
#Deleted in new
chr7	151114677	151123638	chr7:151114677-151123638	1	+	151114770	151122787	789624	9	964,59,88,86,142,135,128,159,914,	0,2115,2417,2693,2958,3532,3827,5309,8047,
#Deleted in new
chr7	151116306	151117682	chr7:151116306-151117682	0	+	151116306	151116306	8553170	5	344,59,88,86,47,	0,486,788,1064,1329,
#Deleted in new
chr7	151117391	151118162	chr7:151117391-151118162	0	+	151117391	151117391	8553170	2	65,527,	0,244,
#Deleted in new
chr7	151117753	151122878	chr7:151117753-151122878	0	+	151117753	151120585	789624	6	24,135,128,159,226,154,	0,456,751,2233,2766,4971,
#Deleted in new
chr7	151118208	151122793	chr7:151118208-151122793	0	+	151118208	151122787	789624	5	136,128,159,48,69,	0,296,1778,2311,4516,
#Deleted in new
chr7	151118267	151120143	chr7:151118267-151120143	0	+	151118267	151118267	8553170	3	77,159,157,	0,206,1719,
#Deleted in new
chr7	151118293	151123876	chr7:151118293-151123876	0	+	151118293	151118293	8553170	3	339,159,83,	0,1693,5500,
#Deleted in new
chr7	151119196	151120733	chr7:151119196-151120733	0	+	151119196	151119196	8553170	3	58,159,214,	0,790,1323,
#Deleted in new
chr7	151120015	151123850	chr7:151120015-151123850	0	+	151120015	151120015	8553170	3	130,226,57,	0,504,3778,
#Deleted in new
chr7	151120070	151121033	chr7:151120070-151121033	0	+	151120070	151120070	8553170	2	75,514,	0,449,
#Deleted in new
chr7	151123621	151138286	chr7:151123621-151138286	0	+	151123621	151123621	8553170	4	265,105,169,144,	0,4958,10778,14521,
#Deleted in new
chr7	151128332	151134534	chr7:151128332-151134534	0	+	151128332	151128332	8553170	2	352,135,	0,6067,
#Deleted in new
chr7	151128576	151138116	chr7:151128576-151138116	0	+	151128576	151128576	8553170	3	108,169,387,	0,5823,9153,
#Deleted in new
chr7	151128595	151131286	chr7:151128595-151131286	0	+	151128595	151128595	8553170	2	89,215,	0,2476,
#Deleted in new
chr7	151134424	151144436	chr7:151134424-151144436	0	+	151134424	151143943	789624	7	144,138,155,91,223,256,700,	0,5554,7473,7738,7987,8916,9312,
#Deleted in new
chr7	151134481	151136560	chr7:151134481-151136560	0	+	151134481	151134481	8553170	2	87,335,	0,1744,
#Deleted in new
chr7	151139567	151144432	chr7:151139567-151144432	0	+	151139567	151139567	8553170	5	2485,91,223,256,696,	0,2595,2844,3773,4169,
#Partially deleted in new
chr7	151148588	151167548	chr7:151148588-151167548	3	-	151148588	151167548	0	2	554,538,	0,18422,
#Partially deleted in new
chr7	151149776	151174745	chr7:151149776-151174745	0	-	151149776	151149776	8553170	3	245,181,130,	0,17234,24839,
#Partially deleted in new
chr7	151175697	151187391	chr7:151175697-151187391	1	-	151176111	151187130	789624	5	269,186,520,268,577,	0,414,5241,10694,11117,
#Partially deleted in new
chr7	151175697	151187832	chr7:151175697-151187832	1	-	151176111	151187722	789624	6	269,186,114,520,268,381,	0,414,865,5241,10694,11754,
#Partially deleted in new
chr7	151175701	151187155	chr7:151175701-151187155	3	-	151176111	151187130	789624	6	265,186,114,520,268,341,	0,410,861,5237,10690,11113,
#Deleted in new
chr7	151186644	151187778	chr7:151186644-151187778	0	-	151187374	151187722	789624	3	15,239,525,	0,170,609,
#Partially deleted in new
chr7	151190872	151205496	chr7:151190872-151205496	3	-	151190979	151205454	789624	19	215,239,178,87,200,108,83,56,84,107,76,123,85,206,72,186,120,328,53,	0,765,1403,1870,2418,3383,3643,4557,4702,5575,6104,6332,6949,7925,9510,12038,12522,13636,14571,
#Partially deleted in new
chr7	151191826	151194279	chr7:151191826-151194279	0	-	151192782	151194279	789624	5	50,178,87,294,24,	0,449,916,1370,2429,
#Deleted in new
chr7	151194255	151197302	chr7:151194255-151197302	0	-	151195900	151197302	789624	8	108,83,56,84,126,107,76,98,	0,260,1174,1319,1594,2192,2721,2949,
#Partially deleted in new
chr7	151207836	151227166	chr7:151207836-151227166	3	-	151208070	151226458	789624	16	271,134,204,129,63,111,90,120,96,103,96,172,183,213,196,4,	0,6221,7042,7767,8130,10244,10724,10917,11227,13741,14684,15841,16095,16939,18468,19326,
#Partially deleted in new
chr7	151207836	151210378	chr7:151207836-151210378	3	-	151207870	151210318	789624	2	271,192,	0,2350,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr7	151212489	151227230	chr7:151212489-151227230	3	-	151214053	151226458	789624	15	1702,204,129,63,111,90,120,96,103,96,172,183,213,196,68,	0,2389,3114,3477,5591,6071,6264,6574,9088,10031,11188,11442,12286,13815,14673,
#Partially deleted in new
chr7	151218159	151221984	chr7:151218159-151221984	0	-	151218159	151218159	8553170	6	32,90,120,96,103,207,	0,401,594,904,3418,3618,
#Partially deleted in new
chr7	151221635	151226626	chr7:151221635-151226626	0	-	151221635	151226458	789624	6	45,96,172,183,213,322,	0,885,2042,2296,3140,4669,
#Partially deleted in new
chr7	151223679	151227035	chr7:151223679-151227035	0	-	151223679	151226458	789624	5	170,183,213,196,179,	0,252,1096,2625,3177,
#Deleted in new
chr7	151226472	151226958	chr7:151226472-151226958	0	-	151226472	151226472	8553170	2	28,221,	0,265,
#Partially deleted in new
chr7	151232488	151235269	chr7:151232488-151235269	0	+	151232764	151235269	789624	2	326,222,	0,2559,
#Partially deleted in new
chr7	151232488	151238819	chr7:151232488-151238819	1	+	151232764	151238681	789624	5	326,189,565,183,1446,	0,1597,2559,3919,4885,
#Partially deleted in new
chr7	151232498	151238827	chr7:151232498-151238827	3	+	151234011	151238681	789624	4	1776,565,183,1454,	0,2549,3909,4875,
#Deleted in new
chr7	151235450	151237593	chr7:151235450-151237593	0	+	151235450	151236982	789624	4	162,183,217,220,	0,957,1505,1923,
#Deleted in new
chr7	151238420	151238538	chr7:151238420-151238538	3	+	151238420	151238420	5263520	1	118,	0,
#Deleted in new
chr7	151238763	151239470	chr7:151238763-151239470	0	-	151238763	151238763	8553170	2	393,75,	0,632,
#Partially deleted in new
chr7	151238972	151248973	chr7:151238972-151248973	1	-	151239102	151248562	789624	13	184,102,123,136,98,162,102,96,123,123,43,212,489,	0,423,651,1139,1452,2519,2904,3164,3508,3748,4686,6487,9512,
#Partially deleted in new
chr7	151238972	151277452	chr7:151238972-151277452	3	-	151239102	151275152	789624	14	184,102,123,136,98,162,102,96,123,123,43,212,138,376,	0,423,651,1139,1452,2519,2904,3164,3508,3748,4686,6487,36141,38104,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	151238973	151275252	chr7:151238973-151275252	0	-	151242734	151275183	789624	11	183,102,123,136,1229,102,96,123,139,43,139,	0,422,650,1138,1451,2903,3163,3507,3731,4685,36140,
#Partially deleted in new
chr7	151238975	151276734	chr7:151238975-151276734	1	-	151239102	151275152	789624	14	181,102,123,136,98,162,102,96,123,123,43,212,138,30,	0,420,648,1136,1449,2516,2901,3161,3505,3745,4683,6484,36138,37729,
#Deleted in new
chr7	151238980	151240208	chr7:151238980-151240208	0	-	151238980	151238980	8553170	2	766,97,	0,1131,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	151239007	151241492	chr7:151239007-151241492	0	-	151239007	151239007	8553170	4	149,102,123,1381,	0,388,616,1104,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	151240398	151240972	chr7:151240398-151240972	3	+	151240398	151240398	8553170	1	574,	0,
#Partially deleted in new
chr7	151240421	151245513	chr7:151240421-151245513	0	-	151242734	151245513	789624	8	101,162,102,96,123,139,43,54,	0,1070,1455,1715,2059,2283,3237,5038,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	151240899	151248685	chr7:151240899-151248685	0	-	151240899	151240899	8553170	8	754,102,96,123,123,43,212,201,	0,977,1237,1581,1821,2759,4560,7585,
#Deleted in new
chr7	151241257	151248646	chr7:151241257-151248646	0	-	151241257	151241257	8553170	7	721,96,123,123,43,212,162,	0,879,1223,1463,2401,4202,7227,
#Deleted in new
chr7	151241798	151243686	chr7:151241798-151243686	0	-	151241798	151241798	8553170	4	180,467,123,28,	0,338,922,1860,
#Deleted in new
chr7	151241907	151242792	chr7:151241907-151242792	0	-	151241907	151241907	8553170	4	71,96,139,72,	0,229,557,813,
#Deleted in new
chr7	151241957	151254478	chr7:151241957-151254478	0	-	151241957	151241957	8553170	7	21,96,123,123,43,212,184,	0,179,523,763,1701,3502,12337,
#Deleted in new
chr7	151242480	151246149	chr7:151242480-151246149	0	-	151242480	151242480	8553170	5	123,123,43,212,172,	0,240,1178,2979,3497,
#Partially deleted in new
chr7	151242720	151277896	chr7:151242720-151277896	0	-	151242720	151275152	789624	5	123,43,212,138,97,	0,938,2739,32393,35079,
#Deleted in new
chr7	151249324	151254390	chr7:151249324-151254390	3	+	151249324	151249324	8553170	2	138,78,	0,4988,
#Partially deleted in new
chr7	151341698	151378449	chr7:151341698-151378449	1	+	151341776	151377225	789624	15	148,119,168,59,71,183,95,107,187,108,153,105,96,178,1403,	0,3649,7374,9725,11113,14069,14429,18442,25240,26162,27036,32398,34149,34935,35348,
#Partially deleted in new
chr7	151341710	151378449	chr7:151341710-151378449	1	+	151341776	151377225	789624	15	136,119,168,59,71,183,95,107,187,108,153,147,96,178,1403,	0,3637,7362,9713,11101,14057,14417,18430,25228,26150,27024,32386,34137,34923,35336,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	151341803	151361249	chr7:151341803-151361249	0	+	151345349	151360251	789624	9	43,119,168,59,71,183,95,774,191,	0,3544,7269,9620,11008,13964,14324,18337,19255,
#Partially deleted in new
chr7	151341811	151378431	chr7:151341811-151378431	3	+	151345349	151377225	0	15	154,119,168,59,71,183,95,107,187,108,153,147,96,178,1385,	0,3536,7261,9612,11000,13956,14316,18329,25127,26049,26923,32285,34036,34822,35235,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	151345344	151361237	chr7:151345344-151361237	0	+	151345349	151352816	789624	9	122,168,59,101,71,183,95,774,179,	0,3728,6079,6748,7467,10423,10783,14796,15714,
#Partially deleted in new
chr7	151345344	151360209	chr7:151345344-151360209	0	+	151345349	151360209	789624	7	122,168,59,71,183,95,69,	0,3728,6079,7467,10423,10783,14796,
#Partially deleted in new
chr7	151351119	151360295	chr7:151351119-151360295	0	+	151351119	151351119	8553170	5	363,71,183,95,155,	0,1692,4648,5008,9021,
#Partially deleted in new
chr7	151351327	151368805	chr7:151351327-151368805	0	+	151351327	151351327	8553170	8	155,71,183,95,107,187,108,71,	0,1484,4440,4800,8813,15611,16533,17407,
#Partially deleted in new
chr7	151352251	151360244	chr7:151352251-151360244	0	+	151352251	151352251	8553170	5	115,71,183,95,104,	0,560,3516,3876,7889,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	151360140	151369193	chr7:151360140-151369193	0	+	151360140	151360140	8553170	4	107,187,108,459,	0,6798,7720,8594,
#Partially deleted in new
chr7	151368732	151377281	chr7:151368732-151377281	0	+	151368732	151377225	789624	4	155,96,178,235,	0,7115,7901,8314,
#Partially deleted in new
chr7	151368829	151374624	chr7:151368829-151374624	0	+	151368829	151374423	789624	2	58,528,	0,5267,
#Partially deleted in new
chr7	151375908	151395917	chr7:151375908-151395917	0	-	151375908	151375908	8553170	2	1239,142,	0,19867,
#Partially deleted in new
chr7	151381120	151410020	chr7:151381120-151410020	3	-	151381581	151409589	789624	6	626,104,136,421,142,594,	0,757,3967,14655,18979,28306,
#Partially deleted in new
chr7	151381120	151410727	chr7:151381120-151410727	1	-	151381358	151396117	789624	5	626,104,421,142,135,	0,757,14655,18979,29472,
#Partially deleted in new
chr7	151381120	151410705	chr7:151381120-151410705	1	-	151381581	151396117	789624	6	626,104,136,421,142,113,	0,757,3967,14655,18979,29472,
#Partially deleted in new
chr7	151381120	151410038	chr7:151381120-151410038	1	-	151381358	151396117	789624	5	626,104,421,142,612,	0,757,14655,18979,28306,
#Partially deleted in new
chr7	151381127	151409631	chr7:151381127-151409631	1	-	151381327	151409589	789624	6	619,104,200,421,142,205,	0,750,3960,14648,18972,28299,
#Deleted in new
chr7	151408559	151409989	chr7:151408559-151409989	0	-	151408559	151408559	8553170	2	494,563,	0,867,
#Deleted in new
chr7	151408972	151410718	chr7:151408972-151410718	0	-	151408972	151408972	8553170	3	81,287,197,	0,454,1549,
#Partially deleted in new
chr7	151409160	151413354	chr7:151409160-151413354	3	+	151409160	151409160	789624	6	222,85,123,104,134,83,	0,2067,2509,2806,3558,4111,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	151409235	151413048	chr7:151409235-151413048	1	+	151409235	151409235	789624	4	147,123,104,330,	0,2434,2731,3483,
#Deleted in new
chr7	151409270	151412101	chr7:151409270-151412101	0	+	151409270	151409270	8553170	2	112,432,	0,2399,
#Deleted in new
chr7	151410561	151412007	chr7:151410561-151412007	0	+	151410561	151410561	8553170	3	202,123,41,	0,1108,1405,
#Partially deleted in new
chr7	151427682	151439124	chr7:151427682-151439124	3	+	151427682	151427682	8553170	2	270,294,	0,11148,
#Partially deleted in new
chr7	151428834	151440813	chr7:151428834-151440813	0	-	151428834	151428834	789624	4	1346,146,406,469,	0,7345,9004,11510,
#Partially deleted in new
chr7	151429718	151436916	chr7:151429718-151436916	0	-	151429718	151429718	8553170	3	462,146,94,	0,6461,7104,
#Partially deleted in new
chr7	151429969	151440044	chr7:151429969-151440044	1	-	151430047	151439917	789624	4	211,146,249,148,	0,6210,8026,9927,
#Partially deleted in new
chr7	151429969	151440044	chr7:151429969-151440044	3	-	151430165	151439917	789624	5	211,118,146,249,148,	0,2198,6210,8026,9927,
#Partially deleted in new
chr7	151430000	151440008	chr7:151430000-151440008	1	-	151437887	151439917	789624	3	180,406,112,	0,7838,9896,
#Partially deleted in new
chr7	151431813	151436273	chr7:151431813-151436273	0	-	151431813	151436273	789624	2	472,94,	0,4366,
#Deleted in new
chr7	151433488	151433639	chr7:151433488-151433639	3	-	151433488	151433488	5263520	1	151,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	151464649	151464938	chr7:151464649-151464938	3	-	151464649	151464649	8553170	1	289,	0,
#Partially deleted in new
chr7	151466011	151519924	chr7:151466011-151519924	3	-	151467118	151519511	0	8	1200,82,48,57,83,68,72,465,	0,4559,5382,5537,11321,18725,24931,53448,
#Partially deleted in new
chr7	151466873	151519183	chr7:151466873-151519183	1	-	151467118	151471565	789624	8	338,82,48,57,83,68,72,152,	0,3697,4520,4675,10459,17863,24069,52158,
#Partially deleted in new
chr7	151466952	151519851	chr7:151466952-151519851	0	-	151498088	151519511	789624	9	259,82,48,57,83,68,72,92,392,	0,3618,4441,4596,10380,17784,23990,31136,52507,
#Partially deleted in new
chr7	151467100	151520120	chr7:151467100-151520120	1	-	151467118	151471565	789624	8	111,82,48,57,83,68,72,223,	0,3470,4293,4448,10232,17636,23842,52797,
#Deleted in new
chr7	151470298	151471803	chr7:151470298-151471803	0	-	151470298	151470298	8553170	2	354,410,	0,1095,
#Partially deleted in new
chr7	151471399	151518069	chr7:151471399-151518069	0	-	151471399	151471565	789624	6	42,57,83,68,72,179,	0,149,5933,13337,19543,46491,
#Deleted in new
chr7	151471403	151472067	chr7:151471403-151472067	0	-	151471403	151471403	8553170	2	38,519,	0,145,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	151501877	151503463	chr7:151501877-151503463	7	+	151501877	151501877	16724991	1	1586,	0,
#Partially deleted in new
chr7	151556110	151877125	chr7:151556110-151877125	3	-	151557200	151876620	789624	16	1122,94,147,38,166,127,55,46,59,82,110,70,218,280,72,619,	0,4413,7967,9235,9609,12605,14060,16553,18780,20260,39234,75958,119309,225041,230359,320396,
#Partially deleted in new
chr7	151556123	151632353	chr7:151556123-151632353	1	-	151557200	151632099	789624	12	1109,94,147,38,166,127,55,46,59,82,110,285,	0,4400,7954,9222,9596,12592,14047,16540,18767,20247,39221,75945,
#Partially deleted in new
chr7	151556160	151736314	chr7:151556160-151736314	1	-	151557200	151735993	789624	14	1072,94,147,38,166,127,55,46,59,82,110,70,218,415,	0,4363,7917,9185,9559,12555,14010,16503,18730,20210,39184,75908,119259,179739,
#Partially deleted in new
chr7	151556940	151814840	chr7:151556940-151814840	1	-	151557200	151786523	789624	16	292,94,147,38,166,127,55,46,59,82,110,70,218,280,72,425,	0,3583,7137,8405,8779,11775,13230,15723,17950,19430,38404,75128,118479,224211,229529,257475,
#Partially deleted in new
chr7	151556992	151564313	chr7:151556992-151564313	0	-	151556992	151556992	8553170	3	240,94,236,	0,3531,7085,
#Partially deleted in new
chr7	151560374	151564314	chr7:151560374-151564314	0	-	151560374	151560374	8553170	2	243,237,	0,3703,
#Partially deleted in new
chr7	151564194	151574951	chr7:151564194-151574951	0	-	151565854	151574947	789624	8	30,38,166,41,127,55,46,61,	0,1151,1525,2378,4521,5976,8469,10696,
#Partially deleted in new
chr7	151568693	151876848	chr7:151568693-151876848	0	-	151595448	151876620	789624	10	149,55,46,59,82,110,218,280,72,342,	0,1477,3970,6197,7677,26651,106726,212458,217776,307813,
#Partially deleted in new
chr7	151568736	151633165	chr7:151568736-151633165	0	-	151568736	151632099	789624	8	106,55,46,59,82,110,70,595,	0,1434,3927,6154,7634,26608,63332,63834,
#Partially deleted in new
chr7	151570189	151632177	chr7:151570189-151632177	0	-	151631640	151632099	789624	7	36,46,59,82,110,131,109,	0,2474,4701,6181,25155,61448,61879,
#Partially deleted in new
chr7	151572407	151632168	chr7:151572407-151632168	0	-	151572407	151572407	8553170	5	302,59,82,110,100,	0,2483,3963,22937,59661,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	151576182	151632227	chr7:151576182-151632227	0	-	151576182	151576182	8553170	3	270,110,159,	0,19162,55886,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	151674938	151877125	chr7:151674938-151877125	0	-	151674938	151674938	8553170	4	699,280,72,619,	0,106213,111531,201568,
#Partially deleted in new
chr7	151675418	151736178	chr7:151675418-151736178	0	-	151675418	151675418	8553170	3	219,64,279,	0,58829,60481,
#Partially deleted in new
chr7	151675547	151790632	chr7:151675547-151790632	0	-	151675547	151675547	8553170	4	90,280,72,133,	0,105604,110922,114952,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	151806489	151810820	chr7:151806489-151810820	3	+	151806489	151806489	8553170	3	547,264,1572,	0,882,2759,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	151806615	151807642	chr7:151806615-151807642	0	+	151806615	151806615	8553170	2	421,200,	0,827,
#Partially deleted in new
chr7	151837267	151876788	chr7:151837267-151876788	0	-	151837267	151837267	8553170	2	228,282,	0,39239,
#Deleted in new
chr7	151877041	151878814	chr7:151877041-151878814	3	+	151877041	151877041	789624	3	99,30,253,	0,795,1520,
#Deleted in new
chr7	151877464	151879223	chr7:151877464-151879223	1	+	151877464	151877464	8553170	2	402,662,	0,1097,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	151900274	151900374	chr7:151900274-151900374	3	+	151900274	151900274	8553170	1	100,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	151916330	151916418	chr7:151916330-151916418	3	+	151916330	151916330	8553170	1	88,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	151950385	151954985	chr7:151950385-151954985	3	-	151950385	151950385	8553170	2	528,57,	0,4543,
#Partially deleted in new
chr7	151956378	152019926	chr7:151956378-152019926	3	+	151967246	152019801	789624	10	78,104,286,121,167,123,250,118,150,281,	0,1404,10829,14566,26607,30780,46335,51448,58265,63267,
#Partially deleted in new
chr7	151956394	152019934	chr7:151956394-152019934	1	+	151967246	152019801	789624	9	215,286,121,167,123,250,118,150,289,	0,10813,14550,26591,30764,46319,51432,58249,63251,
#Partially deleted in new
chr7	151956401	152019856	chr7:151956401-152019856	0	+	151967246	152002747	789624	7	208,286,121,250,118,150,211,	0,10806,14543,46312,51425,58242,63244,
#Partially deleted in new
chr7	151956408	152019842	chr7:151956408-152019842	0	+	151967246	152002747	789624	8	201,104,286,121,250,118,150,197,	0,1374,10799,14536,46305,51418,58235,63237,
#Partially deleted in new
chr7	151956421	152019801	chr7:151956421-152019801	0	+	151967246	151982865	789624	10	188,104,286,121,312,123,250,118,150,156,	0,1361,10786,14523,26419,30737,46292,51405,58222,63224,
#Partially deleted in new
chr7	151956425	152019928	chr7:151956425-152019928	0	+	151967246	151982865	789624	12	184,104,286,121,312,89,252,123,250,118,150,283,	0,1357,10782,14519,26415,27688,29327,30733,46288,51401,58218,63220,
#Partially deleted in new
chr7	151956446	152019926	chr7:151956446-152019926	1	+	151967246	152019801	789624	10	163,104,286,121,167,123,250,118,150,281,	0,1336,10761,14498,26539,30712,46267,51380,58197,63199,
#Partially deleted in new
chr7	151956448	152019929	chr7:151956448-152019929	0	+	151967246	151982865	789624	12	161,104,286,121,312,89,99,123,250,118,150,284,	0,1334,10759,14496,26392,27665,29457,30710,46265,51378,58195,63197,
#Partially deleted in new
chr7	151956461	151960686	chr7:151956461-151960686	0	+	151956461	151956461	8553170	3	148,104,510,	0,1321,3715,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	151970614	151983106	chr7:151970614-151983106	0	+	151970614	151970614	8553170	3	87,121,266,	0,330,12226,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	151994938	152007944	chr7:151994938-152007944	0	+	151994938	151994938	8553170	3	403,250,118,	0,7775,12888,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	152025193	152025472	chr7:152025193-152025472	3	-	152025193	152025193	8553170	1	279,	0,
#Partially deleted in new
chr7	152025673	152103277	chr7:152025673-152103277	0	+	152025673	152025673	8553170	3	211,203,166,	0,68646,77438,
#Partially deleted in new
chr7	152025692	152122347	chr7:152025692-152122347	3	+	152094227	152121677	789624	12	192,333,124,167,126,250,118,153,219,105,138,802,	0,68497,75105,77419,79552,82345,84835,87553,91464,92985,95138,95853,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	152025713	152094522	chr7:152025713-152094522	0	+	152094227	152094522	789624	3	171,122,333,	0,1883,68476,
#Partially deleted in new
chr7	152025741	152103156	chr7:152025741-152103156	0	+	152094227	152103156	789624	3	143,333,45,	0,68448,77370,
#Partially deleted in new
chr7	152025775	152113373	chr7:152025775-152113373	0	+	152094227	152103218	789624	7	109,333,167,126,250,118,128,	0,68414,77336,79469,82262,84752,87470,
#Partially deleted in new
chr7	152025797	152103174	chr7:152025797-152103174	0	+	152094227	152103174	789624	4	87,333,97,63,	0,68392,75027,77314,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	152074985	152104892	chr7:152074985-152104892	1	+	152094227	152103301	789624	5	195,122,333,124,1781,	0,4301,19204,25812,28126,
#Partially deleted in new
chr7	152079274	152104891	chr7:152079274-152104891	1	+	152094227	152103301	789624	4	134,333,124,1780,	0,14915,21523,23837,
#Partially deleted in new
chr7	152093965	152103252	chr7:152093965-152103252	0	+	152094227	152103252	789624	4	118,333,124,141,	0,224,6832,9146,
#Partially deleted in new
chr7	152093990	152103172	chr7:152093990-152103172	0	+	152094227	152103172	789624	3	532,124,61,	0,6807,9121,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	152107249	152119710	chr7:152107249-152119710	0	+	152107249	152107249	8553170	4	1038,118,153,2554,	0,3278,5996,9907,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	152113244	152118769	chr7:152113244-152118769	0	+	152113244	152116945	789624	4	154,135,219,92,	0,3659,3912,5433,
#Partially deleted in new
chr7	152120000	152121717	chr7:152120000-152121717	3	-	152120000	152120000	8553170	2	519,154,	0,1563,
#Deleted in new
chr7	152128878	152129686	chr7:152128878-152129686	7	+	152128878	152128878	16724991	1	808,	0,
#Partially deleted in new
chr7	152134921	152177968	chr7:152134921-152177968	0	-	152138783	152177968	789624	22	3983,74,117,169,131,137,1120,108,140,250,137,179,148,142,165,210,1710,233,64,79,112,1778,	0,4264,4753,9791,10243,11677,13111,15978,16520,17783,19088,19345,20988,21283,22839,23941,27195,32224,34264,36342,39209,41269,
#Partially deleted in new
chr7	152134924	152436005	chr7:152134924-152436005	3	-	152136831	152435786	0	59	2000,109,74,117,169,143,137,1120,108,140,250,137,179,148,142,210,1710,233,64,79,112,1820,293,1884,183,74,215,133,120,33,129,105,181,131,120,129,213,66,110,165,182,105,102,117,120,719,78,114,152,170,115,172,163,110,149,201,139,89,380,	0,3871,4261,4750,9788,10228,11674,13108,15975,16517,17780,19085,19342,20985,21280,23938,27192,32221,34261,36339,39206,41266,44909,45786,48049,50633,52337,52790,59084,59304,59515,60982,64354,68009,70181,72375,85598,87076,87648,89090,89510,94998,95295,100892,103782,112977,114951,115928,117014,117621,128091,130113,138780,175041,176873,180213,195676,223662,300701,
#Partially deleted in new
chr7	152134924	152436005	chr7:152134924-152436005	0	-	152247953	152435786	789624	59	2000,109,74,117,169,143,137,1120,108,140,250,137,179,148,142,210,1710,233,64,79,112,1820,293,1884,183,74,215,133,120,33,129,105,181,131,120,129,213,66,110,165,182,105,102,117,120,719,78,114,152,170,115,172,163,110,149,201,139,89,380,	0,3871,4261,4750,9788,10228,11674,13108,15975,16517,17780,19085,19342,20985,21280,23938,27192,32221,34261,36339,39206,41266,44909,45786,48049,50633,52337,52790,59084,59304,59515,60982,64354,68009,70181,72375,85598,87076,87648,89090,89510,94998,95295,100892,103782,112977,114951,115928,117014,117621,128091,130113,138780,175041,176873,180213,195676,223662,300701,
#Partially deleted in new
chr7	152134928	152436005	chr7:152134928-152436005	1	-	152136831	152435786	0	59	1996,109,74,117,169,143,137,1120,108,140,250,137,179,148,142,210,1710,233,64,79,112,1820,293,1884,183,74,215,133,120,33,129,105,181,131,120,129,213,66,110,165,182,105,102,117,120,719,78,114,152,170,115,172,163,110,149,201,139,89,380,	0,3867,4257,4746,9784,10224,11670,13104,15971,16513,17776,19081,19338,20981,21276,23934,27188,32217,34257,36335,39202,41262,44905,45782,48045,50629,52333,52786,59080,59300,59511,60978,64350,68005,70177,72371,85594,87072,87644,89086,89506,94994,95291,100888,103778,112973,114947,115924,117010,117617,128087,130109,138776,175037,176869,180209,195672,223658,300697,
#Partially deleted in new
chr7	152135532	152163334	chr7:152135532-152163334	0	-	152136831	152163334	789624	18	1392,109,74,117,169,131,137,1120,108,140,250,137,179,148,70,165,210,1218,	0,3263,3653,4142,9180,9632,11066,12500,15367,15909,17172,18477,18734,20377,20672,22228,23330,26584,
#Partially deleted in new
chr7	152136583	152239069	chr7:152136583-152239069	0	-	152136583	152136583	8553170	46	341,109,74,117,169,131,137,1120,108,140,250,137,179,148,142,165,216,1710,233,64,79,112,1820,293,1884,183,74,215,133,120,33,129,105,181,131,120,129,213,66,110,165,182,105,102,117,363,	0,2212,2602,3091,8129,8581,10015,11449,14316,14858,16121,17426,17683,19326,19621,21177,22273,25533,30562,32602,34680,37547,39607,43250,44127,46390,48974,50678,51131,57425,57645,57856,59323,62695,66350,68522,70716,83939,85417,85989,87431,87851,93339,93636,99233,102123,
#Partially deleted in new
chr7	152152888	152155005	chr7:152152888-152155005	0	-	152152888	152152888	8553170	4	66,137,179,97,	0,1121,1378,2020,
#Partially deleted in new
chr7	152152898	152162164	chr7:152152898-152162164	0	-	152152898	152162164	789624	6	56,137,179,148,142,48,	0,1111,1368,3011,3306,9218,
#Partially deleted in new
chr7	152177828	152182219	chr7:152177828-152182219	0	-	152177828	152182219	789624	3	182,293,63,	0,2005,4328,
#Partially deleted in new
chr7	152220041	152222067	chr7:152220041-152222067	0	-	152220041	152220041	8553170	2	694,67,	0,1959,
#Partially deleted in new
chr7	152224121	152248019	chr7:152224121-152248019	0	-	152224121	152248019	789624	6	58,182,105,102,117,118,	0,313,5801,6098,11695,23780,
#Partially deleted in new
chr7	152309933	152312296	chr7:152309933-152312296	0	-	152309933	152309933	8553170	2	142,499,	0,1864,
#Partially deleted in new
chr7	152315264	152435799	chr7:152315264-152435799	0	-	152315264	152435786	789624	4	74,142,89,174,	0,15336,43322,120361,
#Partially deleted in new
chr7	152366762	152367015	chr7:152366762-152367015	7	+	152366762	152366762	16724991	1	253,	0,
#Partially deleted in new
chr7	152367170	152367260	chr7:152367170-152367260	7	+	152367170	152367170	16724991	1	90,	0,
#Deleted in new
chr7	152367518	152368661	chr7:152367518-152368661	7	+	152367518	152367518	16724991	1	1143,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	152402779	152402893	chr7:152402779-152402893	3	+	152402779	152402779	8553170	1	114,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	152435694	152443176	chr7:152435694-152443176	5	+	152435694	152435694	16724991	2	238,1138,	0,6344,
#Partially deleted in new
chr7	152436863	152442847	chr7:152436863-152442847	4	+	152436863	152436863	16724991	2	261,553,	0,5431,
#Partially deleted in new
chr7	152436894	152443016	chr7:152436894-152443016	4	+	152436894	152436894	16724991	2	134,722,	0,5400,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	152436917	152442985	chr7:152436917-152442985	6	+	152436917	152436917	16724991	2	207,947,	0,5121,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	152436925	152443027	chr7:152436925-152443027	4	+	152436925	152436925	16724991	2	103,989,	0,5113,
#Partially deleted in new
chr7	152442542	152442950	chr7:152442542-152442950	5	+	152442542	152442542	16724991	1	408,	0,
#Partially deleted in new
chr7	152445476	152447150	chr7:152445476-152447150	7	+	152445476	152445476	16724991	1	1674,	0,
#Deleted in new
chr7	152463785	152465549	chr7:152463785-152465549	3	+	152463785	152463785	789624	1	1764,	0,
#Deleted in new
chr7	152590640	152590941	chr7:152590640-152590941	7	-	152590640	152590640	16724991	2	264,33,	0,268,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	152592972	152593091	chr7:152592972-152593091	3	-	152592972	152592972	8553170	1	119,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	152592972	152593091	chr7:152592972-152593091	7	-	152592972	152592972	16724991	1	119,	0,
#Partially deleted in new
chr7	152602212	152602892	chr7:152602212-152602892	7	-	152602212	152602212	16724991	2	291,28,	0,652,
#Deleted in new
chr7	152609312	152609434	chr7:152609312-152609434	3	+	152609312	152609312	8553170	1	122,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	152644778	152664004	chr7:152644778-152664004	0	-	152644778	152644778	8553170	3	4585,82,61,	0,15922,19165,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	152646503	152676165	chr7:152646503-152676165	3	-	152648641	152676079	789624	3	2860,82,125,	0,14197,29537,
#Deleted in new
chr7	152749078	152749735	chr7:152749078-152749735	7	+	152749078	152749078	16724991	1	657,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	152757661	152757951	chr7:152757661-152757951	3	+	152757661	152757661	8553170	1	290,	0,
#Partially deleted in new
chr7	152759748	152855378	chr7:152759748-152855378	3	+	152759882	152854553	789624	12	178,56,125,111,96,108,144,174,93,126,84,921,	0,23438,40782,41872,54801,56732,60550,63593,65281,92377,93745,94709,
#Partially deleted in new
chr7	152759748	152854938	chr7:152759748-152854938	1	+	152759882	152854553	789624	10	178,56,125,111,96,108,144,174,93,481,	0,23438,40782,41872,54801,56732,60550,63593,65281,94709,
#Partially deleted in new
chr7	152759787	152854949	chr7:152759787-152854949	1	+	152801659	152854553	789624	11	139,125,111,96,108,144,174,93,126,84,492,	0,40743,41833,54762,56693,60511,63554,65242,92338,93706,94670,
#Partially deleted in new
chr7	152800622	152816522	chr7:152800622-152816522	0	+	152800622	152800622	8553170	5	33,111,37,96,42,	0,998,11074,13927,15858,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	152810741	152855371	chr7:152810741-152855371	0	+	152810741	152810741	8553170	8	3904,104,144,174,93,126,84,914,	0,5743,9557,12600,14288,41384,42752,43716,
#Deleted in new
chr7	153144312	153144588	chr7:153144312-153144588	7	-	153144312	153144312	16724991	1	276,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	153355364	153413981	chr7:153355364-153413981	3	-	153355364	153355364	8553170	5	1117,173,192,107,369,	0,5683,13234,50127,58248,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	153395483	153396921	chr7:153395483-153396921	3	+	153395483	153395483	8553170	2	135,858,	0,580,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	153405492	153413936	chr7:153405492-153413936	0	-	153405492	153405492	8553170	2	106,324,	0,8120,
#Deleted in new
chr7	153449428	153449875	chr7:153449428-153449875	7	+	153449428	153449428	16724991	1	447,	0,
#Partially deleted in new
chr7	153887096	154894285	chr7:153887096-154894285	1	+	153887683	154892480	789624	26	638,115,99,95,75,53,82,121,155,98,124,39,108,92,48,119,48,99,70,195,55,112,59,73,74,1952,	0,559117,587842,653435,679745,750724,782263,840670,882320,885748,906982,908748,914258,916767,917820,919897,966683,980898,985527,988809,993791,998536,1000579,1002175,1002360,1005237,
#Deleted in new
chr7	153968664	153968826	chr7:153968664-153968826	7	-	153968664	153968664	16724991	1	162,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	154026286	154038604	chr7:154026286-154038604	3	-	154026286	154026286	8553170	3	404,123,171,	0,637,12147,
#Partially deleted in new
chr7	154052417	154588631	chr7:154052417-154588631	1	+	154052820	154588084	789624	6	646,115,99,95,75,982,	0,393796,422521,488114,514424,535232,
#Partially deleted in new
chr7	154052679	154893451	chr7:154052679-154893451	3	+	154052820	154892480	0	26	384,115,99,95,75,53,82,121,155,98,124,39,108,92,48,119,48,99,70,195,55,112,59,73,74,1118,	0,393534,422259,487852,514162,585141,616680,675087,716737,720165,741399,743165,748675,751184,752237,754314,801100,815315,819944,823226,828208,832953,834996,836592,836777,839654,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	154055584	154059561	chr7:154055584-154059561	3	-	154055584	154055584	8553170	2	341,2129,	0,1848,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	154092200	154096043	chr7:154092200-154096043	3	-	154092200	154092200	8553170	2	717,2327,	0,1516,
#Partially deleted in new
chr7	154305109	154893451	chr7:154305109-154893451	1	+	154305494	154892480	0	26	442,115,99,95,75,53,82,121,155,98,124,39,108,92,48,119,48,99,70,195,55,112,59,73,74,1118,	0,141104,169829,235422,261732,332711,364250,422657,464307,467735,488969,490735,496245,498754,499807,501884,548670,562885,567514,570796,575778,580523,582566,584162,584347,587224,
#Partially deleted in new
chr7	154305109	154475913	chr7:154305109-154475913	0	+	154305109	154305109	8553170	3	442,115,975,	0,141104,169829,
#Partially deleted in new
chr7	154305211	154587401	chr7:154305211-154587401	0	+	154305211	154305211	8553170	6	340,115,99,95,75,236,	0,141002,169727,235320,261630,281954,
#Partially deleted in new
chr7	154305261	154588084	chr7:154305261-154588084	1	+	154305494	154588084	789624	6	290,115,99,95,75,435,	0,140952,169677,235270,261580,282388,
#Partially deleted in new
chr7	154305441	154892538	chr7:154305441-154892538	1	+	154305494	154892480	789624	24	110,115,99,95,75,121,155,98,124,39,108,92,48,119,48,99,70,195,55,112,59,73,74,205,	0,140772,169497,235090,261400,422325,463975,467403,488637,490403,495913,498422,499475,501552,548338,562553,567182,570464,575446,580191,582234,583830,584015,586892,
#Partially deleted in new
chr7	154793593	154801443	chr7:154793593-154801443	0	+	154793593	154793593	8553170	4	282,124,39,89,	0,485,2251,7761,
#Deleted in new
chr7	154793720	154796236	chr7:154793720-154796236	0	+	154793720	154793720	8553170	3	155,124,392,	0,358,2124,
#Deleted in new
chr7	154793724	154795918	chr7:154793724-154795918	0	+	154793724	154793724	8553170	2	478,74,	0,2120,
#Partially deleted in new
chr7	154803891	154858502	chr7:154803891-154858502	0	+	154803891	154803891	8553170	5	64,48,119,48,276,	0,1025,3102,49888,54335,
#Partially deleted in new
chr7	154838387	154865483	chr7:154838387-154865483	3	-	154838387	154838387	8553170	2	490,174,	0,26922,
#Partially deleted in new
chr7	154867994	154881084	chr7:154867994-154881084	0	+	154867994	154867994	8553170	4	99,70,195,197,	0,4629,7911,12893,
#Partially deleted in new
chr7	154868055	154876386	chr7:154868055-154876386	0	+	154868055	154868055	8553170	3	38,70,481,	0,4568,7850,
#Partially deleted in new
chr7	154872623	154877143	chr7:154872623-154877143	0	+	154872623	154872623	8553170	3	70,195,287,	0,3282,4233,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	154883567	154891230	chr7:154883567-154891230	0	+	154883567	154883567	8553170	4	2177,59,73,1774,	0,4108,5704,5889,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	154928484	154952188	chr7:154928484-154952188	3	+	154928484	154928484	8553170	3	283,594,5829,	0,15542,17875,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	154928497	154946836	chr7:154928497-154946836	0	+	154928497	154928497	789624	5	270,69,594,134,197,	0,458,15529,17862,18142,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	154928516	154945398	chr7:154928516-154945398	0	+	154928516	154928516	8553170	3	251,69,1372,	0,439,15510,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	154928527	154949908	chr7:154928527-154949908	1	+	154928527	154928527	789624	8	240,69,594,134,199,81,193,611,	0,428,15499,17832,18065,19165,19370,20770,
#Partially deleted in new
chr7	154943686	155003084	chr7:154943686-155003084	3	-	154944148	155002929	0	21	478,61,76,135,101,169,103,71,44,185,122,138,96,95,724,636,114,64,44,135,236,	0,2678,2825,2992,4216,10568,11842,13537,16203,17206,17840,18634,19984,24129,24716,32009,39532,47319,50039,54963,59162,
#Partially deleted in new
chr7	154943686	155003084	chr7:154943686-155003084	0	-	154986059	155002929	789624	22	478,61,76,135,101,169,103,71,44,185,122,138,96,95,724,636,114,163,64,44,135,236,	0,2678,2825,2992,4216,10568,11842,13537,16203,17206,17840,18634,19984,24129,24716,32009,39532,42330,47319,50039,54963,59162,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	154943688	154965710	chr7:154943688-154965710	0	-	154943688	154943688	8553170	13	476,61,76,135,172,169,103,71,44,185,122,138,2040,	0,2676,2823,2990,4143,10566,11840,13535,16201,17204,17838,18632,19982,
#Partially deleted in new
chr7	154943690	155002972	chr7:154943690-155002972	1	-	154944148	155002929	0	21	472,63,76,135,101,169,103,71,44,185,122,138,96,95,724,636,114,64,44,135,124,	0,2672,2821,2988,4212,10564,11838,13533,16199,17202,17836,18630,19980,24125,24712,32005,39528,47315,50035,54959,59158,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr7	154943783	155002100	chr7:154943783-155002100	0	-	154943783	154943783	8553170	21	381,61,76,135,101,169,103,71,44,185,122,138,96,95,724,636,114,64,44,135,2021,	0,2581,2728,2895,4119,10471,11745,13440,16106,17109,17743,18537,19887,24032,24619,31912,39435,47222,49942,54866,56296,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	154951225	154952188	chr7:154951225-154952188	3	+	154951225	154951225	8553170	1	963,	0,
#Deleted in new
chr7	154956428	154957107	chr7:154956428-154957107	3	+	154956428	154956428	8553170	1	679,	0,
#Deleted in new
chr7	154961048	154962695	chr7:154961048-154962695	0	-	154961048	154961048	8553170	3	29,122,375,	0,478,1272,
#Partially deleted in new
chr7	154967319	154983744	chr7:154967319-154983744	0	-	154967319	154967319	8553170	4	591,724,636,526,	0,1083,8376,15899,
#Partially deleted in new
chr7	154969048	154974623	chr7:154969048-154974623	0	-	154969048	154969048	8553170	2	78,470,	0,5105,
#Partially deleted in new
chr7	154976122	155002911	chr7:154976122-155002911	0	-	154976122	155002911	789624	4	209,114,135,63,	0,7096,22527,26726,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	155003447	155005703	chr7:155003447-155005703	3	+	155003447	155003447	789624	1	2256,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	155067066	155071557	chr7:155067066-155071557	3	-	155067066	155067066	789624	2	2179,524,	0,3967,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	155070323	155087392	chr7:155070323-155087392	3	+	155070899	155084487	789624	2	1317,3238,	0,13831,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	155070326	155087392	chr7:155070326-155087392	1	+	155070899	155084487	789624	2	1314,3238,	0,13828,
#Deleted in new
chr7	155070426	155071557	chr7:155070426-155071557	0	-	155070426	155070426	8553170	2	27,524,	0,607,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	155071426	155085771	chr7:155071426-155085771	0	+	155071426	155072231	8553170	3	214,249,1617,	0,766,12728,
#Deleted in new
chr7	155074598	155074748	chr7:155074598-155074748	7	+	155074598	155074598	16724991	1	150,	0,
#Partially deleted in new
chr7	155077137	155084615	chr7:155077137-155084615	0	+	155077137	155077137	8553170	2	97,461,	0,7017,
#Deleted in new
chr7	155106061	155106400	chr7:155106061-155106400	7	-	155106061	155106061	16724991	1	339,	0,
#Deleted in new
chr7	155106399	155106651	chr7:155106399-155106651	7	+	155106399	155106399	16724991	1	252,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	155181880	155182184	chr7:155181880-155182184	3	+	155181880	155181880	8553170	1	304,	0,
#Partially deleted in new
chr7	155196562	155198455	chr7:155196562-155198455	3	-	155196562	155196562	8553170	3	425,132,187,	0,699,1706,
#Partially deleted in new
chr7	155196686	155198436	chr7:155196686-155198436	0	-	155196686	155196686	8553170	3	301,113,168,	0,575,1582,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	155204146	155205189	chr7:155204146-155205189	3	+	155204146	155204146	8553170	2	217,150,	0,893,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	155222902	155223851	chr7:155222902-155223851	3	+	155222902	155222902	8553170	1	949,	0,
#Deleted in new
chr7	155267298	155268052	chr7:155267298-155268052	3	+	155267298	155267298	8553170	3	62,262,132,	0,229,622,
#Deleted in new
chr7	155295917	155297541	chr7:155295917-155297541	3	-	155295917	155295917	8553170	1	1624,	0,
#Partially deleted in new
chr7	155297775	155310235	chr7:155297775-155310235	3	+	155298285	155308270	0	6	184,439,125,167,100,1995,	0,483,3790,4475,4971,10465,
#Partially deleted in new
chr7	155297775	155310233	chr7:155297775-155310233	1	+	155298285	155308358	789624	6	184,108,167,100,71,1993,	0,483,4475,4971,6049,10465,
#Deleted in new
chr7	155297828	155298655	chr7:155297828-155298655	0	+	155298285	155298655	789624	2	199,397,	0,430,
#Partially deleted in new
chr7	155297888	155308757	chr7:155297888-155308757	1	+	155298285	155302829	0	4	71,439,100,517,	0,370,4858,10352,
#Partially deleted in new
chr7	155298560	155308960	chr7:155298560-155308960	0	+	155298560	155308358	789624	6	137,125,167,100,71,720,	0,3005,3690,4186,5264,9680,
#Deleted in new
chr7	155301606	155303018	chr7:155301606-155303018	0	+	155301606	155301606	8553170	2	84,768,	0,644,
#Deleted in new
chr7	155357639	155358179	chr7:155357639-155358179	0	-	155357639	155357639	8553170	1	540,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	155382075	155396356	chr7:155382075-155396356	3	+	155382075	155382075	8553170	2	240,1311,	0,12970,
#Deleted in new
chr7	155399921	155401782	chr7:155399921-155401782	3	+	155399921	155399921	8553170	1	1861,	0,
#Partially deleted in new
chr7	155421205	155457099	chr7:155421205-155457099	3	-	155421205	155421205	8553170	3	268,156,110,	0,29961,35784,
#Deleted in new
chr7	155458128	155464831	chr7:155458128-155464831	3	+	155458377	155462687	789624	2	934,2461,	0,4242,
#Partially deleted in new
chr7	155474205	155533838	chr7:155474205-155533838	1	-	155503067	155509037	789624	5	95,85,97,204,79,	0,28815,32814,34688,59554,
#Partially deleted in new
chr7	155474255	155585546	chr7:155474255-155585546	0	-	155474255	155474255	8553170	9	45,108,1051,85,500,204,113,284,30,	0,7624,8579,28765,32361,34638,71575,102294,111261,
#Partially deleted in new
chr7	155500580	155644406	chr7:155500580-155644406	3	-	155500580	155500580	8553170	7	2525,500,204,113,284,137,193,	0,6036,8313,45250,75969,142887,143633,
#Partially deleted in new
chr7	155501131	155533862	chr7:155501131-155533862	1	-	155503067	155509037	789624	4	1974,97,204,103,	0,5888,7762,32628,
#Partially deleted in new
chr7	155501146	155644396	chr7:155501146-155644396	0	-	155501146	155501146	8553170	7	1959,97,204,113,284,137,183,	0,5873,7747,44684,75403,142321,143067,
#Partially deleted in new
chr7	155501297	155644186	chr7:155501297-155644186	0	-	155501297	155501297	8553170	8	1578,85,97,204,113,284,137,246,	0,1723,5722,7596,44533,75252,142170,142643,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr7	155502013	155555450	chr7:155502013-155555450	1	-	155503067	155545929	789624	6	862,85,97,204,113,898,	0,1007,5006,6880,43817,52539,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	155502013	155546559	chr7:155502013-155546559	3	-	155503067	155546471	789624	5	1092,97,204,113,131,	0,5006,6880,43817,44415,
#Partially deleted in new
chr7	155510282	155518623	chr7:155510282-155518623	3	+	155510282	155510282	8553170	2	197,271,	0,8070,
#Partially deleted in new
chr7	155611230	155644401	chr7:155611230-155644401	0	-	155611230	155611230	8553170	3	187,137,188,	0,32237,32983,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	155641915	155644377	chr7:155641915-155644377	3	-	155641915	155641915	789624	3	1055,137,164,	0,1552,2298,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	155643083	155644406	chr7:155643083-155644406	0	-	155643083	155643083	8553170	2	521,45,	0,1278,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	155643200	155644406	chr7:155643200-155644406	1	-	155643200	155643200	8553170	2	404,193,	0,1013,
#Deleted in new
chr7	155643467	155645205	chr7:155643467-155645205	0	-	155643467	155643467	8553170	2	137,75,	0,1663,
#Partially deleted in new
chr7	155644450	155701183	chr7:155644450-155701183	1	+	155644876	155701012	789624	6	469,79,49,77,319,411,	0,20724,28416,34157,36139,56322,
#Partially deleted in new
chr7	155644678	155781479	chr7:155644678-155781479	3	+	155644876	155775041	789624	18	241,79,49,77,319,172,209,253,59,133,344,312,288,642,207,189,89,6487,	0,20496,28188,33929,35911,56094,62181,66524,73706,92851,93381,95036,97140,100282,119133,121788,129880,130314,
#Partially deleted in new
chr7	155644701	155701490	chr7:155644701-155701490	1	+	155644876	155701012	789624	7	218,79,49,77,319,120,718,	0,20473,28165,33906,35888,40231,56071,
#Partially deleted in new
chr7	155672879	155745720	chr7:155672879-155745720	0	+	155672879	155707335	789624	12	36,77,319,172,209,87,253,59,133,1967,288,760,	0,5728,7710,27893,33980,34414,38323,45505,64650,65180,68939,72081,
#Partially deleted in new
chr7	155680668	155737593	chr7:155680668-155737593	0	+	155680668	155737593	789624	6	240,172,209,283,59,64,	0,20104,26191,30504,37716,56861,
#Partially deleted in new
chr7	155700890	155766896	chr7:155700890-155766896	0	+	155700890	155766691	789624	11	54,209,253,59,133,344,312,288,642,210,430,	0,5969,10312,17494,36639,37169,38824,40928,44070,62918,65576,
#Partially deleted in new
chr7	155706813	155718435	chr7:155706813-155718435	0	+	155706813	155706813	8553170	3	255,253,51,	0,4389,11571,
#Partially deleted in new
chr7	155746418	155766556	chr7:155746418-155766556	0	+	155766472	155766556	789624	3	247,210,90,	0,17390,20048,
#Partially deleted in new
chr7	155746585	155781485	chr7:155746585-155781485	1	+	155766472	155775041	789624	5	80,207,189,89,6493,	0,17226,19881,27973,28407,
#Partially deleted in new
chr7	155766555	155775460	chr7:155766555-155775460	0	+	155766555	155775161	789624	3	100,89,363,	0,8003,8542,
#Deleted in new
chr7	155799985	155812273	chr7:155799985-155812273	3	-	155802899	155812122	0	3	3741,262,451,	0,6310,11837,
#Deleted in new
chr7	155800038	155809072	chr7:155800038-155809072	0	-	155800587	155806749	789624	5	207,210,262,129,80,	0,419,6257,6672,8954,
#Deleted in new
chr7	155800039	155809072	chr7:155800039-155809072	0	-	155800039	155806749	789624	4	206,262,129,80,	0,6256,6671,8953,
#Deleted in new
chr7	155800049	155809072	chr7:155800049-155809072	0	-	155800526	155806749	789624	5	196,140,262,129,80,	0,408,6246,6661,8943,
#Deleted in new
chr7	155806581	155807370	chr7:155806581-155807370	0	-	155806581	155806581	8553170	2	258,246,	0,543,
#Deleted in new
chr7	155962631	155966343	chr7:155962631-155966343	3	+	155962631	155962631	8553170	2	644,1892,	0,1820,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	156186121	156186223	chr7:156186121-156186223	3	-	156186121	156186121	8553170	1	102,	0,
#Deleted in new
chr7	156263546	156263802	chr7:156263546-156263802	7	+	156263546	156263546	16724991	1	256,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	156432522	156435833	chr7:156432522-156435833	3	-	156432522	156432522	8553170	2	357,75,	0,3236,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	156437788	156445588	chr7:156437788-156445588	3	-	156437788	156437788	789624	3	1207,151,1340,	0,3441,6460,
#Partially deleted in new
chr7	156472195	156603195	chr7:156472195-156603195	3	-	156472195	156472195	789624	2	516,145,	0,130855,
#Partially deleted in new
chr7	156472245	156605764	chr7:156472245-156605764	0	-	156472245	156472245	8553170	3	466,193,107,	0,132942,133412,
#Deleted in new
chr7	156540490	156541103	chr7:156540490-156541103	3	+	156540490	156540490	789624	1	613,	0,
#Partially deleted in new
chr7	156584159	156640592	chr7:156584159-156640592	1	-	156584159	156584159	8553170	4	361,127,193,57,	0,19625,21028,56376,
#Partially deleted in new
chr7	156603617	156640581	chr7:156603617-156640581	1	-	156603617	156603617	8553170	4	294,193,107,46,	0,1570,2040,36918,
#Partially deleted in new
chr7	156605131	156605744	chr7:156605131-156605744	1	-	156605131	156605131	8553170	2	249,87,	0,526,
#Partially deleted in new
chr7	156633354	156633787	chr7:156633354-156633787	7	+	156633354	156633354	16724991	1	433,	0,
#Deleted in new
chr7	156638362	156640654	chr7:156638362-156640654	1	-	156638362	156638362	789624	1	2292,	0,
#Deleted in new
chr7	156639431	156640563	chr7:156639431-156640563	1	-	156639431	156639431	8553170	2	517,28,	0,1104,
#Deleted in new
chr7	156640003	156640654	chr7:156640003-156640654	0	-	156640003	156640003	8553170	1	651,	0,
#Partially deleted in new
chr7	156640280	156658549	chr7:156640280-156658549	0	+	156643877	156658549	789624	7	53,92,259,143,33,125,88,	0,3520,4218,14295,17260,17847,18181,
#Partially deleted in new
chr7	156640673	156644539	chr7:156640673-156644539	0	+	156643877	156644539	789624	4	64,111,92,41,	0,2303,3127,3825,
#Partially deleted in new
chr7	156640746	156677124	chr7:156640746-156677124	3	+	156643877	156676655	789624	9	258,92,259,143,33,125,109,168,706,	0,3054,3752,13829,16794,17381,17715,34949,35672,
#Partially deleted in new
chr7	156640748	156654921	chr7:156640748-156654921	0	+	156640748	156640748	8553170	4	207,92,259,346,	0,3052,3750,13827,
#Partially deleted in new
chr7	156640770	156677130	chr7:156640770-156677130	1	+	156643877	156676655	789624	9	41,92,259,143,33,125,109,168,712,	0,3030,3728,13805,16770,17357,17691,34925,35648,
#Partially deleted in new
chr7	156640783	156677095	chr7:156640783-156677095	1	+	156643877	156676655	789624	10	221,111,92,259,143,33,125,109,168,677,	0,2193,3017,3715,13792,16757,17344,17678,34912,35635,
#Partially deleted in new
chr7	156640878	156677130	chr7:156640878-156677130	1	+	156643877	156676375	789624	9	77,92,259,143,33,125,109,168,836,	0,2922,3620,13697,16662,17249,17583,34817,35416,
#Partially deleted in new
chr7	156642976	156677124	chr7:156642976-156677124	1	+	156643877	156676655	789624	9	111,92,259,143,33,125,109,168,706,	0,824,1522,11599,14564,15151,15485,32719,33442,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	156643789	156660350	chr7:156643789-156660350	1	+	156643877	156658886	789624	7	103,259,143,33,125,109,1488,	0,709,10786,13751,14338,14672,15073,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr7	156643800	156677130	chr7:156643800-156677130	0	+	156643877	156646467	789624	9	92,259,107,143,33,125,109,168,712,	0,698,2653,10775,13740,14327,14661,31895,32618,
#Partially deleted in new
chr7	156644595	156658572	chr7:156644595-156658572	0	+	156644595	156644595	8553170	5	162,143,33,69,111,	0,9980,12945,13588,13866,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	156654184	156657693	chr7:156654184-156657693	3	-	156654184	156654184	8553170	2	503,239,	0,3270,
#Deleted in new
chr7	156654436	156658992	chr7:156654436-156658992	0	+	156654436	156654436	8553170	5	21,62,69,109,130,	0,139,3747,4025,4426,
#Deleted in new
chr7	156654658	156658991	chr7:156654658-156658991	0	+	156654658	156654658	8553170	5	60,33,125,109,129,	0,2882,3469,3803,4204,
#Deleted in new
chr7	156657542	156658860	chr7:156657542-156658860	0	+	156657542	156657542	8553170	3	31,69,399,	0,641,919,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	156668945	156682093	chr7:156668945-156682093	0	-	156668945	156668945	8553170	5	342,239,230,132,265,	0,7440,10131,11497,12883,
#Deleted in new
chr7	156676250	156679109	chr7:156676250-156679109	0	-	156676250	156676250	8553170	2	433,33,	0,2826,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr7	156677790	156893230	chr7:156677790-156893230	3	-	156684077	156892993	789624	17	6373,162,67,91,74,78,77,81,73,65,69,127,104,140,40,73,303,	0,10239,46321,47644,47973,50139,50853,56386,78602,84343,85317,85878,118598,148814,155962,159022,215137,
#Deleted in new
chr7	156677842	156679133	chr7:156677842-156679133	0	-	156677842	156677842	8553170	2	508,57,	0,1234,
#Partially deleted in new
chr7	156680876	156893208	chr7:156680876-156893208	1	-	156684077	156763762	789624	16	3287,67,91,74,78,77,81,73,65,69,127,104,140,40,73,281,	0,43235,44558,44887,47053,47767,53300,75516,81257,82231,82792,115512,145728,152876,155936,212051,
#Partially deleted in new
chr7	156681519	156796493	chr7:156681519-156796493	0	-	156779699	156796493	789624	13	2644,67,91,74,78,77,81,73,65,69,127,78,105,	0,42592,43915,44244,46410,47124,52657,74873,80614,81588,82149,98135,114869,
#Partially deleted in new
chr7	156682210	156892987	chr7:156682210-156892987	0	-	156684077	156892987	789624	18	1953,162,67,91,74,78,77,81,123,73,65,69,127,104,140,40,73,60,	0,5819,41901,43224,43553,45719,46433,51966,54282,74182,79923,80897,81458,114178,144394,151542,154602,210717,
#Partially deleted in new
chr7	156688097	156893208	chr7:156688097-156893208	0	-	156763700	156892993	789624	9	94,67,81,73,65,69,127,73,281,	0,36014,46079,68295,74036,75010,75571,148715,204830,
#Partially deleted in new
chr7	156688102	156747978	chr7:156688102-156747978	0	-	156688102	156688102	8553170	8	89,67,91,74,78,77,81,55,	0,36009,37332,37661,39827,40541,46074,59821,
#Partially deleted in new
chr7	156688113	156726103	chr7:156688113-156726103	0	-	156688113	156688113	8553170	4	78,67,91,340,	0,35998,37321,37650,
#Partially deleted in new
chr7	156733860	156763177	chr7:156733860-156763177	0	-	156733860	156733860	8553170	4	397,73,65,70,	0,22532,28273,29247,
#Partially deleted in new
chr7	156763109	156893183	chr7:156763109-156893183	0	-	156763109	156763109	8553170	4	67,127,73,256,	0,559,73703,129818,
#Partially deleted in new
chr7	156763124	156893182	chr7:156763124-156893182	0	-	156826666	156892993	789624	5	52,127,104,140,255,	0,544,33264,63480,129803,
#Partially deleted in new
chr7	156763142	156893157	chr7:156763142-156893157	0	-	156833739	156892993	789624	7	34,127,104,140,54,73,230,	0,526,33246,63462,70596,73670,129785,
#Partially deleted in new
chr7	156763702	156892579	chr7:156763702-156892579	0	-	156763702	156763702	8553170	6	93,104,140,40,73,110,	0,32686,62902,70050,73110,128767,
#Partially deleted in new
chr7	156796473	156893179	chr7:156796473-156893179	0	-	156826733	156892993	789624	4	19,140,40,252,	0,30131,37279,96454,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	156822240	156893216	chr7:156822240-156893216	0	-	156833788	156892993	789624	5	1683,140,40,77,289,	0,4364,11512,14568,70687,
#Partially deleted in new
chr7	156833477	156893183	chr7:156833477-156893183	0	-	156833477	156833477	8553170	3	315,73,256,	0,3335,59450,
#Deleted in new
chr7	156944720	156945645	chr7:156944720-156945645	3	+	156944720	156944720	8553170	2	251,280,	0,645,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr7	156949722	156973182	chr7:156949722-156973182	3	+	156949737	156969703	789624	11	1002,125,196,324,111,168,122,133,132,110,3654,	0,2751,4380,10128,12428,13285,14182,16547,17238,19364,19806,
#Partially deleted in new
chr7	156954111	156960118	chr7:156954111-156960118	0	+	156954111	156954111	8553170	3	187,251,268,	0,4494,5739,
#Partially deleted in new
chr7	156959995	156963352	chr7:156959995-156963352	0	+	156959995	156959995	8553170	3	258,111,345,	0,2155,3012,
#Deleted in new
chr7	156962167	156964235	chr7:156962167-156964235	0	+	156962167	156962167	8553170	3	94,168,331,	0,840,1737,
#Deleted in new
chr7	156962170	156964125	chr7:156962170-156964125	0	+	156962170	156962170	8553170	2	91,1118,	0,837,
#Deleted in new
chr7	156962170	156963475	chr7:156962170-156963475	0	+	156962170	156962170	8553170	2	91,468,	0,837,
#Partially deleted in new
chr7	156966158	156969196	chr7:156966158-156969196	0	+	156966158	156966158	8553170	3	244,132,110,	0,802,2928,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	156968754	156970083	chr7:156968754-156970083	0	+	156968754	156968754	8553170	2	442,555,	0,774,
#Partially deleted in new
chr7	156994050	157009075	chr7:156994050-157009075	3	-	156994125	157009052	789624	2	131,78,	0,14947,
#Partially deleted in new
chr7	156994050	157009697	chr7:156994050-157009697	0	-	156994125	157009697	789624	2	131,38,	0,15609,
#Partially deleted in new
chr7	157004852	157010651	chr7:157004852-157010651	1	-	157005519	157010350	789624	3	1021,161,992,	0,1626,4807,
#Partially deleted in new
chr7	157004852	157009435	chr7:157004852-157009435	1	-	157005519	157009052	789624	3	1021,161,438,	0,1626,4145,
#Partially deleted in new
chr7	157005841	157009287	chr7:157005841-157009287	0	-	157005841	157009052	789624	2	32,290,	0,3156,
#Partially deleted in new
chr7	157005841	157009435	chr7:157005841-157009435	0	-	157005841	157009052	789624	3	32,161,438,	0,637,3156,
#Partially deleted in new
chr7	157005841	157009435	chr7:157005841-157009435	0	-	157008620	157009052	789624	3	32,161,908,	0,637,2686,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	157006306	157007132	chr7:157006306-157007132	3	+	157006306	157006306	789624	2	118,256,	0,570,
#Deleted in new
chr7	157007538	157009291	chr7:157007538-157009291	0	-	157007538	157007538	8553170	1	1753,	0,
#Partially deleted in new
chr7	157010804	157016426	chr7:157010804-157016426	3	+	157010804	157010804	789624	2	503,538,	0,5084,
#Deleted in new
chr7	157057708	157058514	chr7:157057708-157058514	3	-	157057708	157057708	8553170	2	124,308,	0,498,
#Deleted in new
chr7	157087954	157088543	chr7:157087954-157088543	7	-	157087954	157087954	16724991	1	589,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	157109979	157111072	chr7:157109979-157111072	3	+	157109979	157109979	8553170	1	1093,	0,
#Partially deleted in new
chr7	157138912	157269372	chr7:157138912-157269372	3	+	157139272	157267755	789624	23	426,54,75,147,116,158,154,221,152,188,87,158,233,105,88,98,133,248,213,189,67,131,1788,	0,24897,30135,31391,36006,39777,42605,43195,44965,47921,62808,68485,68790,77954,81776,84341,86494,92167,109455,115041,115331,118001,128672,
#Partially deleted in new
chr7	157138915	157189296	chr7:157138915-157189296	1	+	157139272	157188961	789624	10	255,127,147,116,158,154,221,152,188,348,	0,296,31388,36003,39774,42602,43192,44962,47918,50033,
#Partially deleted in new
chr7	157139194	157189294	chr7:157139194-157189294	1	+	157139272	157188961	789624	9	144,147,116,158,154,221,152,188,346,	0,31109,35724,39495,42323,42913,44683,47639,49754,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	157139278	157170450	chr7:157139278-157170450	0	+	157139278	157164475	789624	5	60,54,112,75,147,	0,24531,25140,29769,31025,
#Deleted in new
chr7	157192367	157192832	chr7:157192367-157192832	7	+	157192367	157192367	16724991	1	465,	0,
#Deleted in new
chr7	157197599	157198511	chr7:157197599-157198511	7	-	157197599	157197599	16724991	2	682,84,	0,828,
#Partially deleted in new
chr7	157207512	157217245	chr7:157207512-157217245	0	+	157207512	157207512	8553170	3	43,233,379,	0,190,9354,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr7	157220667	157269116	chr7:157220667-157269116	0	+	157220667	157220667	8553170	8	2684,133,248,213,189,67,131,1532,	0,4739,10412,27700,33286,33576,36246,46917,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	157225499	157231815	chr7:157225499-157231815	0	+	157225499	157225499	8553170	2	40,736,	0,5580,
#Partially deleted in new
chr7	157225501	157248624	chr7:157225501-157248624	0	+	157225501	157225501	8553170	3	38,248,257,	0,5578,22866,
#Partially deleted in new
chr7	157256686	157267676	chr7:157256686-157267676	0	+	157256686	157256686	8553170	2	358,92,	0,10898,
#Deleted in new
chr7	157263021	157263229	chr7:157263021-157263229	7	-	157263021	157263021	16724991	1	208,	0,
#Deleted in new
chr7	157281535	157282686	chr7:157281535-157282686	3	-	157281535	157281535	8553170	2	22,543,	0,608,
#Partially deleted in new
chr7	157335380	157382336	chr7:157335380-157382336	0	+	157358572	157382336	789624	8	26,412,121,91,110,60,111,91,	0,981,1643,23166,27780,31121,31992,46865,
#Partially deleted in new
chr7	157336965	157417439	chr7:157336965-157417439	1	+	157358572	157416098	789624	10	179,91,110,60,111,132,142,71,207,1424,	0,21581,26195,29536,30407,45280,47901,48575,72829,79050,
#Partially deleted in new
chr7	157336965	157386324	chr7:157336965-157386324	3	+	157358572	157385646	789624	8	179,91,110,60,111,132,142,784,	0,21581,26195,29536,30407,45280,47901,48575,
#Partially deleted in new
chr7	157337003	157372227	chr7:157337003-157372227	0	+	157337003	157337003	8553170	7	141,91,110,60,111,105,81,	0,21543,26157,29498,30369,33760,35143,
#Partially deleted in new
chr7	157337009	157385605	chr7:157337009-157385605	0	+	157358572	157385605	789624	8	141,91,110,60,111,132,142,65,	0,21537,26151,29492,30363,45236,47857,48531,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr7	157337022	157417433	chr7:157337022-157417433	0	+	157358572	157410108	789624	10	122,91,110,60,111,132,142,71,5735,1418,	0,21524,26138,29479,30350,45223,47844,48518,72772,78993,
#Partially deleted in new
chr7	157337024	157416475	chr7:157337024-157416475	1	+	157358572	157416098	789624	7	120,91,110,60,111,207,460,	0,21522,26136,29477,30348,72770,78991,
#Partially deleted in new
chr7	157337024	157368795	chr7:157337024-157368795	0	+	157337024	157337024	8553170	6	120,91,110,60,111,59,	0,21522,26136,29477,30348,31712,
#Partially deleted in new
chr7	157337045	157382272	chr7:157337045-157382272	0	+	157358572	157369403	789624	7	99,91,110,60,111,116,27,	0,21501,26115,29456,30327,32314,45200,
#Partially deleted in new
chr7	157337054	157366525	chr7:157337054-157366525	0	+	157358572	157366525	789624	5	90,251,91,110,24,	0,506,21492,26106,29447,
#Partially deleted in new
chr7	157337524	157382275	chr7:157337524-157382275	0	+	157358572	157382275	789624	6	104,91,110,60,111,30,	0,21022,25636,28977,29848,44721,
#Partially deleted in new
chr7	157337542	157367432	chr7:157337542-157367432	0	+	157358572	157367432	789624	5	269,91,110,60,60,	0,21004,25618,28959,29830,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	157339820	157363230	chr7:157339820-157363230	0	+	157358572	157363230	789624	3	237,91,70,	0,18726,23340,
#Partially deleted in new
chr7	157358572	157410108	chr7:157358572-157410108	1	+	157358572	157410108	789624	8	65,110,60,111,132,142,71,314,	0,4588,7929,8800,23673,26294,26968,51222,
#Partially deleted in new
chr7	157368607	157384983	chr7:157368607-157384983	0	+	157368607	157368607	8553170	6	335,121,116,79,132,117,	0,523,752,2182,13638,16259,
#Partially deleted in new
chr7	157368800	157410001	chr7:157368800-157410001	0	+	157368800	157368800	8553170	5	142,132,142,71,207,	0,13445,16066,16740,40994,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	157378124	157386318	chr7:157378124-157386318	0	+	157378124	157378124	8553170	3	4253,142,778,	0,6742,7416,
#Deleted in new
chr7	157381820	157382743	chr7:157381820-157382743	0	+	157381820	157381820	8553170	2	166,498,	0,425,
#Partially deleted in new
chr7	157466230	157499716	chr7:157466230-157499716	3	+	157466230	157466230	789624	4	2316,231,115,1387,	0,4638,27102,32099,
#Deleted in new
chr7	157501321	157503577	chr7:157501321-157503577	3	+	157501321	157501321	8553170	3	194,126,226,	0,1662,2030,
#Partially deleted in new
chr7	157513293	157516841	chr7:157513293-157516841	0	+	157513293	157513293	8553170	3	44,202,46,	0,2984,3502,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr7	157515792	157518658	chr7:157515792-157518658	3	+	157515792	157515792	8553170	3	209,680,649,	0,485,2217,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr7	157525782	157527325	chr7:157525782-157527325	3	+	157525782	157525782	8553170	1	1543,	0,
#Partially deleted in new
chr7	157539055	158587773	chr7:157539055-158587773	1	-	157540713	158587669	0	22	1730,74,65,54,167,120,78,74,148,195,213,65,80,383,41,222,361,169,103,114,51,216,	0,9890,29846,32384,37557,38965,56182,64946,82306,117301,143669,359617,542242,594621,597599,599238,627875,653271,666115,777763,950679,1048502,
#Partially deleted in new
chr7	157539055	158587788	chr7:157539055-158587788	1	-	157540713	158587669	789624	22	1730,74,65,54,167,120,78,74,148,195,213,65,80,87,383,41,222,361,169,103,51,231,	0,9890,29846,32384,37557,38965,56182,64946,82306,117301,143669,359617,542242,571773,594621,597599,599238,627875,653271,666115,950679,1048502,
#Partially deleted in new
chr7	157539060	158587711	chr7:157539060-158587711	3	-	157540713	158587669	0	22	1725,74,65,54,167,120,78,74,148,195,213,65,80,87,383,41,222,361,169,103,114,154,	0,9885,29841,32379,37552,38960,56177,64941,82301,117296,143664,359612,542237,571768,594616,597594,599233,627870,653266,666110,777758,1048497,
#Partially deleted in new
chr7	157539065	158587679	chr7:157539065-158587679	1	-	157540713	158587669	0	23	1720,74,65,54,167,120,78,74,148,195,213,65,80,87,383,41,222,361,169,103,114,51,122,	0,9880,29836,32374,37547,38955,56172,64936,82296,117291,143659,359607,542232,571763,594611,597589,599228,627865,653261,666105,777753,950669,1048492,
#Partially deleted in new
chr7	157540336	157621509	chr7:157540336-157621509	0	-	157540412	157621509	8553170	10	110,68,74,65,54,167,120,78,74,148,	0,381,8609,28565,31103,36276,37684,54901,63665,81025,
#Partially deleted in new
chr7	157574335	157574422	chr7:157574335-157574422	3	-	157574335	157574335	5263520	1	87,	0,
#Deleted in new
chr7	157614022	157618765	chr7:157614022-157618765	3	+	157614022	157614022	8553170	2	79,3377,	0,1366,
#Partially deleted in new
chr7	157739009	157740456	chr7:157739009-157740456	3	-	157739009	157739009	8553170	2	442,171,	0,1276,
#Deleted in new
chr7	157854528	157857852	chr7:157854528-157857852	1	+	157854528	157854528	8553170	3	347,204,563,	0,1398,2761,
#Deleted in new
chr7	157854607	157857582	chr7:157854607-157857582	1	+	157854607	157854607	8553170	2	268,293,	0,2682,
#Partially deleted in new
chr7	157854799	157863011	chr7:157854799-157863011	3	+	157854799	157854799	8553170	2	76,467,	0,7745,
#Deleted in new
chr7	157868537	157869154	chr7:157868537-157869154	3	+	157868537	157868537	8553170	1	617,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	157987168	157989456	chr7:157987168-157989456	3	+	157987168	157987168	8553170	2	76,1386,	0,902,
#Deleted in new
chr7	158027372	158031128	chr7:158027372-158031128	3	+	158027372	158027372	8553170	2	104,3496,	0,260,
#Partially deleted in new
chr7	158110824	158205277	chr7:158110824-158205277	1	-	158110824	158205277	789624	7	91,383,41,222,361,169,107,	0,22852,25830,27469,56106,81502,94346,
#Deleted in new
chr7	158532717	158532813	chr7:158532717-158532813	3	-	158532717	158532717	5263520	1	96,	0,
#Deleted in new
chr7	158537494	158539879	chr7:158537494-158539879	3	+	158537494	158537494	8553170	2	120,469,	0,1916,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr7	158590628	158591120	chr7:158590628-158591120	3	+	158590628	158590628	8553170	2	179,215,	0,277,
#Deleted in new
chr7	158591615	158591696	chr7:158591615-158591696	3	+	158591615	158591615	5263520	1	81,	0,
#Partially deleted in new
chr7	158623187	158623449	chr7:158623187-158623449	7	-	158623187	158623187	16724991	1	262,	0,
#Partially deleted in new
chr7	158631310	158703704	chr7:158631310-158703704	0	-	158675592	158701899	789624	30	407,100,101,104,141,188,195,141,117,174,154,71,174,113,223,97,153,140,126,96,87,70,95,135,155,115,189,117,101,55,	0,12978,14208,15149,19521,20982,23284,23807,24028,24949,25241,27027,30883,32873,33217,37085,40203,44166,48649,49410,51989,54861,56037,58508,59257,61531,61998,70511,70937,72339,
#Partially deleted in new
chr7	158631312	158704829	chr7:158631312-158704829	3	-	158631665	158701899	789624	28	405,100,101,104,141,188,100,141,117,174,154,71,174,113,223,153,180,126,96,87,70,95,135,155,115,189,117,106,	0,12976,14206,15147,19519,20980,23282,23805,24026,24947,25239,27025,30881,32871,33215,40201,44164,48647,49408,51987,54859,56035,58506,59255,61529,61996,70509,73411,
#Partially deleted in new
chr7	158631313	158704804	chr7:158631313-158704804	1	-	158631665	158701899	789624	29	404,100,101,104,141,188,100,141,117,174,154,71,174,113,223,153,180,126,96,87,70,95,135,155,115,189,117,53,81,	0,12975,14205,15146,19518,20979,23281,23804,24025,24946,25238,27024,30880,32870,33214,40200,44163,48646,49407,51986,54858,56034,58505,59254,61528,61995,70508,72336,73410,
#Partially deleted in new
chr7	158631435	158689895	chr7:158631435-158689895	0	-	158631665	158689895	789624	22	282,100,101,104,188,100,141,117,174,154,71,174,113,223,153,180,126,96,87,70,95,77,	0,12853,14083,15024,20857,23159,23682,23903,24824,25116,26902,30758,32748,33092,40078,44041,48524,49285,51864,54736,55912,58383,
#Partially deleted in new
chr7	158631665	158693339	chr7:158631665-158693339	0	-	158631665	158631665	8553170	25	52,100,101,104,141,188,100,338,174,154,71,174,113,223,153,180,126,96,87,70,95,135,155,115,31,	0,12623,13853,14794,19166,20627,22929,23452,24594,24886,26672,30528,32518,32862,39848,43811,48294,49055,51634,54506,55682,58153,58902,61176,61643,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr7	158639795	158704798	chr7:158639795-158704798	1	-	158641463	158701899	789624	28	1759,100,101,104,141,188,100,141,117,174,154,71,174,113,223,153,180,126,96,87,70,95,135,155,115,189,117,75,	0,4493,5723,6664,11036,12497,14799,15322,15543,16464,16756,18542,22398,24388,24732,31718,35681,40164,40925,43504,46376,47552,50023,50772,53046,53513,62026,64928,
#Partially deleted in new
chr7	158656601	158665386	chr7:158656601-158665386	0	-	158656601	158656601	8553170	5	104,71,113,223,72,	0,1736,7582,7926,8713,
#Partially deleted in new
chr7	158658337	158665232	chr7:158658337-158665232	0	-	158658337	158658337	8553170	4	71,113,223,150,	0,5846,6190,6745,
#Partially deleted in new
chr7	158662225	158667238	chr7:158662225-158667238	0	-	158662225	158662225	8553170	4	142,113,223,103,	0,1958,2302,4910,
#Partially deleted in new
chr7	158662239	158668195	chr7:158662239-158668195	0	-	158662239	158662239	8553170	5	128,113,223,57,33,	0,1944,2288,4896,5923,
#Partially deleted in new
chr7	158693411	158696651	chr7:158693411-158696651	0	-	158693411	158693411	8553170	2	86,511,	0,2729,
#Deleted in new
chr7	158719729	158720161	chr7:158719729-158720161	7	+	158719729	158719729	16724991	1	432,	0,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr7	158730994	158829628	chr7:158730994-158829628	3	-	158734206	158829562	789624	22	3258,50,106,132,99,374,150,87,75,96,90,49,83,177,121,56,90,73,77,135,42,540,	0,3427,4508,6053,8028,10528,12534,17199,18654,28491,29063,30501,32088,33682,36659,42346,57009,57350,62655,66947,68036,98094,
#Partially deleted in new
chr7	158733610	158829472	chr7:158733610-158829472	0	-	158734206	158829472	789624	23	642,50,106,132,99,374,150,87,75,63,96,90,49,83,177,121,56,90,73,77,135,42,384,	0,811,1892,3437,5412,7912,9918,14583,16038,19170,25875,26447,27885,29472,31066,34043,39730,54393,54734,60039,64331,65420,95478,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr7	158733612	158744217	chr7:158733612-158744217	0	-	158733612	158733612	8553170	7	640,50,106,132,99,374,689,	0,809,1890,3435,5410,7910,9916,
#Partially deleted in new
chr7	158734206	158830038	chr7:158734206-158830038	1	-	158734206	158830038	789624	24	46,50,106,132,99,374,150,87,75,96,90,49,83,177,121,56,90,73,77,135,42,269,67,222,	0,215,1296,2841,4816,7316,9322,13987,15442,25279,25851,27289,28876,30470,33447,39134,53797,54138,59443,63735,64824,94882,95234,95610,
#Partially deleted in new
chr7	158773366	158827641	chr7:158773366-158827641	0	-	158773366	158773366	8553170	7	30,90,73,77,135,42,99,	0,14637,14978,20283,24575,25664,54176,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	158793673	158830253	chr7:158793673-158830253	0	-	158793673	158793673	8553170	4	53,135,42,433,	0,4268,5357,36147,
#Partially deleted in new
chr7	158856577	158946189	chr7:158856577-158946189	3	+	158856735	158945779	789624	25	173,54,421,83,306,56,55,69,78,220,103,130,112,89,130,173,163,114,62,52,61,100,132,224,609,	0,13277,14564,20031,23106,27986,30443,34687,45161,45798,49411,54972,56407,57655,62162,65799,66993,69609,69824,70414,73877,77551,77840,85347,89003,
#Partially deleted in new
chr7	158869445	158871499	chr7:158869445-158871499	0	+	158871210	158871499	789624	3	45,54,358,	0,409,1696,
#Partially deleted in new
chr7	158879779	158946189	chr7:158879779-158946189	0	+	158879779	158926441	789624	20	210,56,55,69,78,220,103,130,112,89,130,163,114,62,52,61,100,132,224,609,	0,4784,7241,11485,21959,22596,26209,31770,33205,34453,38960,43791,46407,46622,47212,50675,54349,54638,62145,65801,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr7	158884573	158946189	chr7:158884573-158946189	0	+	158884573	158884573	8553170	20	46,55,69,78,2908,103,130,112,89,130,173,163,114,62,52,61,100,132,224,609,	0,2447,6691,17165,17802,21415,26976,28411,29659,34166,37803,38997,41613,41828,42418,45881,49555,49844,57351,61007,
#Partially deleted in new
chr7	158934192	158956747	chr7:158934192-158956747	0	+	158934192	158945779	789624	5	36,132,224,255,165,	0,225,7732,11388,22390,
#Deleted in new
chr7	159006521	159008789	chr7:159006521-159008789	0	+	159006521	159006521	8553170	2	306,240,	0,2028,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	159008353	159022680	chr7:159008353-159022680	0	+	159008353	159008353	8553170	4	1085,1189,542,1008,	0,8104,11953,13319,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr7	159008420	159026238	chr7:159008420-159026238	3	+	159008420	159008420	789624	5	1018,1189,542,125,1072,	0,8037,11886,13252,16746,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr7	159017407	159030195	chr7:159017407-159030195	1	+	159017407	159017407	8553170	4	239,364,125,3956,	0,3077,4265,8832,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr7	159028174	159144957	chr7:159028174-159144957	3	-	159030615	159144771	0	13	2615,42,130,92,70,61,151,142,98,98,108,100,237,	0,3653,3763,6038,6406,7777,8577,14860,30306,75582,81637,114271,116546,
#Partially deleted in new
chr7	159030454	159097204	chr7:159030454-159097204	1	-	159030615	159097143	0	10	335,42,130,92,70,61,151,142,98,370,	0,1373,1483,3758,4126,5497,6297,12580,28026,66380,
#Partially deleted in new
chr7	159030517	159144859	chr7:159030517-159144859	1	-	159030615	159144771	789624	13	272,42,130,92,70,61,151,142,98,98,108,100,562,	0,1310,1420,3695,4063,5434,6234,12517,27963,73239,79294,111928,113780,
#Partially deleted in new
chr7	159116921	159144852	chr7:159116921-159144852	1	-	159117323	159144771	789624	3	485,100,132,	0,25524,27799,
#Partially deleted in new
chr7	159231434	159233377	chr7:159231434-159233377	7	+	159231434	159231434	16724991	3	328,555,237,	0,762,1706,
#Deleted in new
chr7_GL383534v2_alt	492	19739	chr7_GL383534v2_alt:492-19739	0	+	492	19516	789624	7	80,58,151,98,71,85,361,	0,3059,7347,7910,15362,17624,18886,
#Deleted in new
chr7_GL383534v2_alt	492	18167	chr7_GL383534v2_alt:492-18167	0	+	492	8420	789624	5	80,58,98,71,51,	0,3059,7910,15362,17624,
#Deleted in new
chr7_GL383534v2_alt	492	21836	chr7_GL383534v2_alt:492-21836	3	+	492	19516	789624	7	80,58,151,98,71,85,2458,	0,3059,7347,7910,15362,17624,18886,
#Deleted in new
chr7_GL383534v2_alt	15722	19657	chr7_GL383534v2_alt:15722-19657	0	+	15722	15722	8553170	3	203,85,279,	0,2394,3656,
#Deleted in new
chr7_GL383534v2_alt	18972	23402	chr7_GL383534v2_alt:18972-23402	3	-	18972	18972	8553170	2	503,267,	0,4163,
#Deleted in new
chr7_GL383534v2_alt	23319	68748	chr7_GL383534v2_alt:23319-68748	3	-	29247	68748	789624	9	6124,69,151,132,139,154,159,100,268,	0,7444,8176,8459,9559,17339,28752,29833,45161,
#Deleted in new
chr7_GL383534v2_alt	28521	68210	chr7_GL383534v2_alt:28521-68210	1	-	29247	53247	789624	9	922,69,151,132,100,154,159,100,60,	0,2242,2974,3257,4357,12137,23550,24631,39629,
#Deleted in new
chr7_GL383534v2_alt	76937	110830	chr7_GL383534v2_alt:76937-110830	3	-	76937	76937	789624	7	1420,186,109,175,154,185,33,	0,9851,19578,22866,23654,33045,33860,
#Deleted in new
chr7_GL383534v2_alt	77231	110820	chr7_GL383534v2_alt:77231-110820	0	-	77231	77231	8553170	3	1126,109,23,	0,19284,33566,
#Deleted in new
chr7_GL383534v2_alt	77231	110820	chr7_GL383534v2_alt:77231-110820	0	-	77231	77231	8553170	4	1126,109,154,23,	0,19284,23360,33566,
#Deleted in new
chr7_GL383534v2_alt	77231	110857	chr7_GL383534v2_alt:77231-110857	0	-	77231	77231	8553170	7	1126,186,109,439,154,185,60,	0,9557,19284,22572,23360,32751,33566,
#Deleted in new
chr7_GL383534v2_alt	77231	110946	chr7_GL383534v2_alt:77231-110946	0	-	77231	77231	8553170	5	1126,186,109,154,149,	0,9557,19284,23360,33566,
#Deleted in new
chr7_GL383534v2_alt	78295	110852	chr7_GL383534v2_alt:78295-110852	0	-	78295	78295	8553170	5	62,109,154,185,55,	0,18220,22296,31687,32502,
#Deleted in new
chr7_GL383534v2_alt	78302	110830	chr7_GL383534v2_alt:78302-110830	0	-	78302	78302	8553170	6	55,43,186,109,154,33,	0,6055,8486,18213,22289,32495,
#Deleted in new
chr7_GL383534v2_alt	80952	103871	chr7_GL383534v2_alt:80952-103871	3	+	81358	102920	0	12	748,197,46,173,122,147,108,86,171,143,143,977,	0,5856,7869,10719,12582,14781,15588,15837,16673,18951,21178,21942,
#Deleted in new
chr7_GL383534v2_alt	91761	99967	chr7_GL383534v2_alt:91761-99967	0	+	91761	99967	789624	6	83,122,147,108,86,64,	0,1773,3972,4779,5028,8142,
#Deleted in new
chr7_GL383534v2_alt	93394	110141	chr7_GL383534v2_alt:93394-110141	0	-	93394	93394	8553170	4	254,109,154,159,	0,3121,7197,16588,
#Deleted in new
chr7_GL383534v2_alt	96501	110375	chr7_GL383534v2_alt:96501-110375	0	-	96501	96501	8553170	3	123,154,393,	0,4090,13481,
#Deleted in new
chr7_GL383534v2_alt	100248	110831	chr7_GL383534v2_alt:100248-110831	0	-	100248	100248	8553170	2	497,34,	0,10549,
#Deleted in new
chr7_GL383534v2_alt	100583	100748	chr7_GL383534v2_alt:100583-100748	3	+	100583	100583	8553170	1	165,	0,
#Deleted in new
chr7_GL383534v2_alt	110920	118184	chr7_GL383534v2_alt:110920-118184	0	+	111766	118184	0	6	90,67,61,141,88,89,	0,803,3848,5240,5581,7175,
#Deleted in new
chr7_GL383534v2_alt	110957	118184	chr7_GL383534v2_alt:110957-118184	0	+	111766	118184	0	6	146,67,61,141,88,89,	0,766,3811,5203,5544,7138,
#Deleted in new
chr7_GL383534v2_alt	110957	114290	chr7_GL383534v2_alt:110957-114290	0	+	110957	110957	8553170	2	53,2567,	0,766,
#Deleted in new
chr7_GL383534v2_alt	110964	119126	chr7_GL383534v2_alt:110964-119126	0	+	110964	110964	8553170	6	46,67,61,141,88,1031,	0,759,3804,5196,5537,7131,
#Deleted in new
chr7_GL383534v2_alt	110990	118184	chr7_GL383534v2_alt:110990-118184	0	+	110990	110990	789624	7	20,67,50,61,141,88,89,	0,733,3358,3778,5170,5511,7105,
#Deleted in new
chr7_GL383534v2_alt	110995	118184	chr7_GL383534v2_alt:110995-118184	2	+	111766	118184	789624	6	180,67,61,141,88,89,	0,728,3773,5165,5506,7100,
#Deleted in new
chr7_GL383534v2_alt	110999	118184	chr7_GL383534v2_alt:110999-118184	0	+	111766	118184	0	6	11,67,61,141,88,89,	0,724,3769,5161,5502,7096,
#Deleted in new
chr7_GL383534v2_alt	111000	113314	chr7_GL383534v2_alt:111000-113314	0	+	111000	111000	8553170	2	103,1591,	0,723,
#Deleted in new
chr7_GL383534v2_alt	111000	118145	chr7_GL383534v2_alt:111000-118145	0	+	111766	118145	789624	6	193,67,61,141,88,50,	0,723,3768,5160,5501,7095,
#Deleted in new
chr7_GL383534v2_alt	111005	118184	chr7_GL383534v2_alt:111005-118184	0	+	111005	111005	8553170	7	5,67,44,61,141,88,89,	0,718,3343,3763,5155,5496,7090,
#Deleted in new
chr7_GL383534v2_alt	111008	112356	chr7_GL383534v2_alt:111008-112356	0	+	111008	111008	8553170	2	167,633,	0,715,
#Deleted in new
chr7_GL383534v2_alt	111199	118184	chr7_GL383534v2_alt:111199-118184	0	+	111766	118184	0	6	79,67,61,141,88,89,	0,524,3569,4961,5302,6896,
#Deleted in new
chr7_GL383534v2_alt	111202	114829	chr7_GL383534v2_alt:111202-114829	0	+	111766	114829	789624	3	342,67,61,	0,521,3566,
#Deleted in new
chr7_GL383534v2_alt	111206	118184	chr7_GL383534v2_alt:111206-118184	1	+	111766	118184	0	6	392,67,61,141,88,89,	0,517,3562,4954,5295,6889,
#Deleted in new
chr7_KI270803v1_alt	403	68627	chr7_KI270803v1_alt:403-68627	3	+	403	67771	789624	53	92,57,125,89,50,168,153,201,155,169,97,113,126,129,111,63,135,88,139,134,35,117,149,85,57,125,89,50,168,153,201,155,169,97,113,126,129,111,63,135,88,139,134,35,117,149,85,57,125,89,50,171,934,	0,1591,2198,9261,11711,12173,13770,14260,16230,17034,17476,18306,19679,20948,21332,21787,24044,24975,25860,26811,27064,27191,28049,28817,30123,32470,35561,37679,38135,39794,40284,42267,43518,43951,44777,45995,47309,47694,48131,53389,53997,54888,55840,56096,56223,57041,57807,59069,61089,62278,64106,64745,67290,
#Deleted in new
chr7_KI270803v1_alt	410	68627	chr7_KI270803v1_alt:410-68627	0	+	410	67771	789624	30	85,57,125,89,50,168,153,201,155,169,97,113,126,129,111,63,135,88,139,134,35,117,149,85,57,125,89,50,171,934,	0,1584,2191,9254,11704,12166,13763,14253,16223,17027,17469,18299,19672,20941,21325,21780,24037,24968,25853,26804,56089,56216,57034,57800,59062,61082,62271,64099,64738,67283,
#Deleted in new
chr7_KI270803v1_alt	425	2321	chr7_KI270803v1_alt:425-2321	0	+	425	425	8553170	2	70,327,	0,1569,
#Deleted in new
chr7_KI270803v1_alt	56653	57890	chr7_KI270803v1_alt:56653-57890	0	+	56653	56653	8553170	2	90,446,	0,791,
#Deleted in new
chr7_KI270803v1_alt	73628	105863	chr7_KI270803v1_alt:73628-105863	1	+	78753	105780	789624	13	59,106,80,124,110,155,172,100,113,126,132,99,215,	0,5125,8553,19199,19769,20182,22232,24792,25684,26793,29053,29272,32020,
#Deleted in new
chr7_KI270803v1_alt	73633	184204	chr7_KI270803v1_alt:73633-184204	3	+	78753	183939	789624	48	54,106,80,124,110,155,172,100,113,126,132,99,114,85,118,172,117,155,85,57,125,89,50,168,156,219,155,169,97,113,126,129,108,63,135,85,139,134,35,117,149,85,57,125,89,50,171,2455,	0,5120,8548,19194,19764,20177,22227,24787,25679,26788,29048,29267,32015,33107,35702,42264,42975,46183,46494,47533,48380,49371,50201,53102,54344,55514,58321,59518,60344,60898,61475,63898,71512,73323,74235,75996,77613,84400,84811,84946,85646,85890,86385,86861,88126,96819,106607,108116,
#Deleted in new
chr7_KI270803v1_alt	133049	183168	chr7_KI270803v1_alt:133049-183168	0	+	133049	133049	8553170	22	271,97,113,126,129,108,63,135,85,139,134,35,117,149,85,57,125,89,87,50,171,1419,	0,928,1482,2059,4482,12096,13907,14819,16580,18197,24984,25395,25530,26230,26474,26969,27445,28710,37050,37403,47191,48700,
#Deleted in new
chr7_KI270803v1_alt	202638	208966	chr7_KI270803v1_alt:202638-208966	7	-	202638	202638	16724991	11	132,60,99,129,204,105,171,93,162,147,288,	0,1564,1758,2123,2563,2941,3237,4221,4550,5247,6040,
#Deleted in new
chr7_KI270803v1_alt	202672	205683	chr7_KI270803v1_alt:202672-205683	4	-	202672	202672	16724991	6	98,60,97,92,167,102,	0,1530,1724,2108,2550,2909,
#Deleted in new
chr7_KI270803v1_alt	214042	219958	chr7_KI270803v1_alt:214042-219958	3	-	214120	219607	789624	6	228,140,257,139,81,68,	0,329,2912,3392,5525,5848,
#Deleted in new
chr7_KI270803v1_alt	214043	219927	chr7_KI270803v1_alt:214043-219927	1	-	214120	219607	789624	5	227,140,257,139,360,	0,328,2911,3391,5524,
#Deleted in new
chr7_KI270803v1_alt	227729	233200	chr7_KI270803v1_alt:227729-233200	7	-	227729	227729	16724991	4	147,133,255,154,	0,859,3800,5317,
#Deleted in new
chr7_KI270803v1_alt	230180	234134	chr7_KI270803v1_alt:230180-234134	5	-	230180	230180	16724991	3	1604,154,283,	0,2866,3671,
#Deleted in new
chr7_KI270803v1_alt	247658	250778	chr7_KI270803v1_alt:247658-250778	3	+	247658	247658	8553170	2	100,284,	0,2836,
#Deleted in new
chr7_KI270803v1_alt	249159	251689	chr7_KI270803v1_alt:249159-251689	7	-	249159	249159	16724991	4	147,138,251,145,	0,687,1348,2385,
#Deleted in new
chr7_KI270803v1_alt	249280	250755	chr7_KI270803v1_alt:249280-250755	4	-	249280	249280	16724991	3	26,114,523,	0,566,952,
#Deleted in new
chr7_KI270803v1_alt	261096	261380	chr7_KI270803v1_alt:261096-261380	7	+	261096	261096	16724991	1	284,	0,
#Deleted in new
chr7_KI270803v1_alt	262826	263335	chr7_KI270803v1_alt:262826-263335	3	+	262900	263335	789624	2	123,298,	0,211,
#Deleted in new
chr7_KI270803v1_alt	270444	270951	chr7_KI270803v1_alt:270444-270951	3	+	270491	270951	789624	2	96,295,	0,212,
#Deleted in new
chr7_KI270803v1_alt	275086	275569	chr7_KI270803v1_alt:275086-275569	3	+	275115	275569	789624	2	78,295,	0,188,
#Deleted in new
chr7_KI270803v1_alt	282575	283443	chr7_KI270803v1_alt:282575-283443	3	+	282973	283443	0	3	124,234,294,	0,213,574,
#Deleted in new
chr7_KI270803v1_alt	290200	290690	chr7_KI270803v1_alt:290200-290690	3	+	290257	290690	789624	2	106,295,	0,195,
#Deleted in new
chr7_KI270803v1_alt	294085	294607	chr7_KI270803v1_alt:294085-294607	3	+	294118	294607	789624	2	82,298,	0,224,
#Deleted in new
chr7_KI270803v1_alt	307331	307896	chr7_KI270803v1_alt:307331-307896	3	+	307442	307896	789624	2	160,295,	0,270,
#Deleted in new
chr7_KI270803v1_alt	311094	311575	chr7_KI270803v1_alt:311094-311575	3	+	311142	311575	789624	2	97,295,	0,186,
#Deleted in new
chr7_KI270803v1_alt	321101	321561	chr7_KI270803v1_alt:321101-321561	7	+	321101	321101	16724991	2	49,295,	0,165,
#Deleted in new
chr7_KI270803v1_alt	324449	325014	chr7_KI270803v1_alt:324449-325014	3	+	324560	325014	789624	2	160,295,	0,270,
#Deleted in new
chr7_KI270803v1_alt	332715	333228	chr7_KI270803v1_alt:332715-333228	3	+	332795	333228	789624	2	129,295,	0,218,
#Deleted in new
chr7_KI270803v1_alt	336390	336930	chr7_KI270803v1_alt:336390-336930	3	+	336429	336930	789624	2	88,298,	0,242,
#Deleted in new
chr7_KI270803v1_alt	342210	342489	chr7_KI270803v1_alt:342210-342489	7	+	342210	342210	16724991	1	279,	0,
#Deleted in new
chr7_KI270803v1_alt	356221	356494	chr7_KI270803v1_alt:356221-356494	7	+	356221	356221	16724991	1	273,	0,
#Deleted in new
chr7_KI270803v1_alt	364382	364838	chr7_KI270803v1_alt:364382-364838	3	+	364403	364838	789624	2	70,295,	0,161,
#Deleted in new
chr7_KI270803v1_alt	367924	368431	chr7_KI270803v1_alt:367924-368431	3	+	367974	368431	789624	2	99,298,	0,209,
#Deleted in new
chr7_KI270803v1_alt	369967	370237	chr7_KI270803v1_alt:369967-370237	7	+	369967	369967	16724991	1	270,	0,
#Deleted in new
chr7_KI270803v1_alt	372792	373259	chr7_KI270803v1_alt:372792-373259	3	+	372792	373259	789624	2	49,294,	0,173,
#Deleted in new
chr7_KI270803v1_alt	375481	376003	chr7_KI270803v1_alt:375481-376003	3	+	375528	376003	0	2	96,294,	0,228,
#Deleted in new
chr7_KI270803v1_alt	383452	383970	chr7_KI270803v1_alt:383452-383970	3	+	383520	383970	789624	2	117,295,	0,223,
#Deleted in new
chr7_KI270803v1_alt	391258	391723	chr7_KI270803v1_alt:391258-391723	3	+	391275	391723	789624	2	66,298,	0,167,
#Deleted in new
chr7_KI270803v1_alt	398810	399253	chr7_KI270803v1_alt:398810-399253	7	+	398810	398810	16724991	2	46,298,	0,145,
#Deleted in new
chr7_KI270803v1_alt	408531	409032	chr7_KI270803v1_alt:408531-409032	3	+	408582	409032	789624	2	100,295,	0,206,
#Deleted in new
chr7_KI270803v1_alt	417473	417973	chr7_KI270803v1_alt:417473-417973	3	+	417473	417473	8553170	2	110,298,	0,202,
#Deleted in new
chr7_KI270803v1_alt	424462	424905	chr7_KI270803v1_alt:424462-424905	7	+	424462	424462	16724991	2	46,298,	0,145,
#Deleted in new
chr7_KI270803v1_alt	434526	435028	chr7_KI270803v1_alt:434526-435028	3	+	434592	435028	0	2	115,295,	0,207,
#Deleted in new
chr7_KI270803v1_alt	438752	439214	chr7_KI270803v1_alt:438752-439214	3	+	438752	439214	789624	2	49,298,	0,164,
#Deleted in new
chr7_KI270803v1_alt	446497	447163	chr7_KI270803v1_alt:446497-447163	3	+	446698	447163	789624	2	250,294,	0,372,
#Deleted in new
chr7_KI270803v1_alt	453133	453612	chr7_KI270803v1_alt:453133-453612	3	+	453179	453612	789624	2	95,295,	0,184,
#Deleted in new
chr7_KI270803v1_alt	457693	458165	chr7_KI270803v1_alt:457693-458165	7	+	457693	457693	16724991	2	49,296,	0,176,
#Deleted in new
chr7_KI270803v1_alt	466143	466615	chr7_KI270803v1_alt:466143-466615	3	+	466150	466615	789624	2	56,294,	0,178,
#Deleted in new
chr7_KI270803v1_alt	471416	471891	chr7_KI270803v1_alt:471416-471891	3	+	471458	471891	789624	2	91,295,	0,180,
#Deleted in new
chr7_KI270803v1_alt	475727	476265	chr7_KI270803v1_alt:475727-476265	3	+	475772	476265	789624	2	94,298,	0,240,
#Deleted in new
chr7_KI270803v1_alt	483624	484131	chr7_KI270803v1_alt:483624-484131	3	+	483665	484131	789624	2	90,294,	0,213,
#Deleted in new
chr7_KI270803v1_alt	490911	491406	chr7_KI270803v1_alt:490911-491406	3	+	490977	491406	789624	2	115,292,	0,203,
#Deleted in new
chr7_KI270803v1_alt	495221	495723	chr7_KI270803v1_alt:495221-495723	3	+	495221	495723	789624	2	49,298,	0,204,
#Deleted in new
chr7_KI270803v1_alt	503683	504150	chr7_KI270803v1_alt:503683-504150	3	+	503683	504150	789624	2	49,294,	0,173,
#Deleted in new
chr7_KI270803v1_alt	510989	511422	chr7_KI270803v1_alt:510989-511422	3	+	510989	511422	789624	2	49,295,	0,138,
#Deleted in new
chr7_KI270803v1_alt	515604	516088	chr7_KI270803v1_alt:515604-516088	3	+	515604	516088	789624	2	49,298,	0,186,
#Deleted in new
chr7_KI270803v1_alt	523328	524288	chr7_KI270803v1_alt:523328-524288	3	+	523821	524288	789624	3	49,135,294,	0,407,666,
#Deleted in new
chr7_KI270803v1_alt	533022	533495	chr7_KI270803v1_alt:533022-533495	3	+	533022	533495	789624	2	49,298,	0,175,
#Deleted in new
chr7_KI270803v1_alt	539539	540023	chr7_KI270803v1_alt:539539-540023	3	+	539539	540023	789624	2	79,295,	0,189,
#Deleted in new
chr7_KI270803v1_alt	547946	548396	chr7_KI270803v1_alt:547946-548396	3	+	547946	548396	789624	2	49,295,	0,155,
#Deleted in new
chr7_KI270803v1_alt	558544	559027	chr7_KI270803v1_alt:558544-559027	3	+	558589	559027	789624	2	94,298,	0,185,
#Deleted in new
chr7_KI270803v1_alt	564114	564623	chr7_KI270803v1_alt:564114-564623	3	+	564176	564623	789624	2	111,298,	0,211,
#Deleted in new
chr7_KI270803v1_alt	567428	567934	chr7_KI270803v1_alt:567428-567934	3	+	567487	567934	789624	2	108,298,	0,208,
#Deleted in new
chr7_KI270803v1_alt	584634	585145	chr7_KI270803v1_alt:584634-585145	3	+	584698	585145	789624	2	113,298,	0,213,
#Deleted in new
chr7_KI270803v1_alt	591583	592075	chr7_KI270803v1_alt:591583-592075	3	+	591642	592075	789624	2	108,298,	0,194,
#Deleted in new
chr7_KI270803v1_alt	596643	597189	chr7_KI270803v1_alt:596643-597189	3	+	596720	597189	789624	2	126,295,	0,251,
#Deleted in new
chr7_KI270803v1_alt	601731	602185	chr7_KI270803v1_alt:601731-602185	3	+	601731	602185	789624	2	49,298,	0,156,
#Deleted in new
chr7_KI270803v1_alt	605341	606074	chr7_KI270803v1_alt:605341-606074	3	+	605341	606074	789624	2	49,295,	0,438,
#Deleted in new
chr7_KI270803v1_alt	619378	620078	chr7_KI270803v1_alt:619378-620078	3	+	619459	620078	789624	2	130,298,	0,402,
#Deleted in new
chr7_KI270803v1_alt	622511	623195	chr7_KI270803v1_alt:622511-623195	3	+	622719	623195	789624	2	257,295,	0,389,
#Deleted in new
chr7_KI270803v1_alt	630310	631061	chr7_KI270803v1_alt:630310-631061	3	+	630388	631061	789624	2	109,304,	0,447,
#Deleted in new
chr7_KI270803v1_alt	640571	641032	chr7_KI270803v1_alt:640571-641032	7	+	640571	640571	16724991	2	50,298,	0,163,
#Deleted in new
chr7_KI270803v1_alt	645393	645844	chr7_KI270803v1_alt:645393-645844	7	+	645393	645393	16724991	2	49,288,	0,163,
#Deleted in new
chr7_KI270803v1_alt	649612	650109	chr7_KI270803v1_alt:649612-650109	3	+	649612	650109	789624	2	49,298,	0,199,
#Deleted in new
chr7_KI270803v1_alt	658917	659430	chr7_KI270803v1_alt:658917-659430	3	+	658953	659430	789624	2	85,296,	0,217,
#Deleted in new
chr7_KI270803v1_alt	668824	670271	chr7_KI270803v1_alt:668824-670271	3	+	669783	669858	789624	1	1447,	0,
#Deleted in new
chr7_KI270803v1_alt	673292	673797	chr7_KI270803v1_alt:673292-673797	3	+	673329	673797	789624	2	86,295,	0,210,
#Deleted in new
chr7_KI270803v1_alt	683955	684410	chr7_KI270803v1_alt:683955-684410	7	+	683955	683955	16724991	2	48,268,	0,187,
#Deleted in new
chr7_KI270803v1_alt	698248	698733	chr7_KI270803v1_alt:698248-698733	7	+	698248	698248	16724991	2	49,295,	0,190,
#Deleted in new
chr7_KI270803v1_alt	713964	714505	chr7_KI270803v1_alt:713964-714505	7	+	713964	713964	16724991	2	49,359,	0,182,
#Deleted in new
chr7_KI270803v1_alt	717927	718443	chr7_KI270803v1_alt:717927-718443	3	+	717970	718443	8553170	2	92,295,	0,221,
#Deleted in new
chr7_KI270803v1_alt	723241	723742	chr7_KI270803v1_alt:723241-723742	3	+	723261	723742	8553170	2	69,295,	0,206,
#Deleted in new
chr7_KI270803v1_alt	724939	725346	chr7_KI270803v1_alt:724939-725346	7	+	724939	724939	16724991	1	407,	0,
#Deleted in new
chr7_KI270803v1_alt	742798	743487	chr7_KI270803v1_alt:742798-743487	3	+	742865	743487	8553170	2	101,301,	0,388,
#Deleted in new
chr7_KI270803v1_alt	752064	755673	chr7_KI270803v1_alt:752064-755673	3	+	752081	755617	789624	6	57,160,33,191,137,209,	0,1087,2306,2369,2963,3400,
#Deleted in new
chr7_KI270803v1_alt	752064	755617	chr7_KI270803v1_alt:752064-755617	1	+	752081	755617	789624	6	57,160,42,254,137,153,	0,1087,1601,2306,2963,3400,
#Deleted in new
chr7_KI270803v1_alt	752068	754605	chr7_KI270803v1_alt:752068-754605	0	+	752068	752068	8553170	2	53,1380,	0,1157,
#Deleted in new
chr7_KI270803v1_alt	752075	755667	chr7_KI270803v1_alt:752075-755667	1	+	752081	755617	0	5	46,160,254,137,203,	0,1076,2295,2952,3389,
#Deleted in new
chr7_KI270803v1_alt	752077	753688	chr7_KI270803v1_alt:752077-753688	0	+	752077	752077	8553170	2	44,537,	0,1074,
#Deleted in new
chr7_KI270803v1_alt	753261	755666	chr7_KI270803v1_alt:753261-755666	0	+	753261	755469	789624	4	50,254,120,202,	0,1109,1766,2203,
#Deleted in new
chr7_KI270803v1_alt	753706	755669	chr7_KI270803v1_alt:753706-755669	0	+	753706	753706	8553170	3	918,137,205,	0,1321,1758,
#Deleted in new
chr7_KI270803v1_alt	763009	766538	chr7_KI270803v1_alt:763009-766538	7	+	763009	763009	16724991	5	40,160,254,137,151,	0,1060,2279,2940,3378,
#Deleted in new
chr7_KI270803v1_alt	773585	777110	chr7_KI270803v1_alt:773585-777110	7	+	773585	773585	16724991	5	40,160,254,137,153,	0,1069,2287,2936,3372,
#Deleted in new
chr7_KI270803v1_alt	783677	787211	chr7_KI270803v1_alt:783677-787211	7	+	783677	783677	16724991	5	40,128,254,137,152,	0,1105,2294,2948,3382,
#Deleted in new
chr7_KI270803v1_alt	793942	795525	chr7_KI270803v1_alt:793942-795525	0	+	793942	793942	8553170	2	53,504,	0,1079,
#Deleted in new
chr7_KI270803v1_alt	793955	797532	chr7_KI270803v1_alt:793955-797532	3	+	793955	797481	789624	5	40,160,254,137,204,	0,1066,2283,2936,3373,
#Deleted in new
chr7_KI270803v1_alt	795131	797530	chr7_KI270803v1_alt:795131-797530	0	+	795131	795131	8553170	3	50,120,202,	0,1760,2197,
#Deleted in new
chr7_KI270803v1_alt	801615	802509	chr7_KI270803v1_alt:801615-802509	7	-	801615	801615	16724991	1	894,	0,
#Deleted in new
chr7_KI270803v1_alt	809185	809197	chr7_KI270803v1_alt:809185-809197	3	+	809185	809197	8553170	1	12,	0,
#Deleted in new
chr7_KI270803v1_alt	809852	809900	chr7_KI270803v1_alt:809852-809900	3	+	809852	809900	8553170	1	48,	0,
#Deleted in new
chr7_KI270803v1_alt	809989	810037	chr7_KI270803v1_alt:809989-810037	3	+	809989	810037	789624	1	48,	0,
#Deleted in new
chr7_KI270803v1_alt	810602	810652	chr7_KI270803v1_alt:810602-810652	3	+	810602	810652	789624	1	50,	0,
#Deleted in new
chr7_KI270803v1_alt	811197	811248	chr7_KI270803v1_alt:811197-811248	3	+	811197	811248	789624	1	51,	0,
#Deleted in new
chr7_KI270803v1_alt	811470	811520	chr7_KI270803v1_alt:811470-811520	3	+	811470	811520	789624	1	50,	0,
#Deleted in new
chr7_KI270803v1_alt	811960	812013	chr7_KI270803v1_alt:811960-812013	3	+	811960	812013	789624	1	53,	0,
#Deleted in new
chr7_KI270803v1_alt	814666	816341	chr7_KI270803v1_alt:814666-816341	3	+	814666	816114	8553170	4	387,18,107,248,	0,828,998,1427,
#Deleted in new
chr7_KI270803v1_alt	819337	819387	chr7_KI270803v1_alt:819337-819387	3	+	819337	819387	789624	1	50,	0,
#Deleted in new
chr7_KI270803v1_alt	819532	819583	chr7_KI270803v1_alt:819532-819583	3	+	819532	819583	789624	1	51,	0,
#Deleted in new
chr7_KI270803v1_alt	819669	819715	chr7_KI270803v1_alt:819669-819715	3	+	819669	819715	789624	1	46,	0,
#Deleted in new
chr7_KI270803v1_alt	819819	819868	chr7_KI270803v1_alt:819819-819868	3	+	819819	819868	789624	1	49,	0,
#Deleted in new
chr7_KI270803v1_alt	819970	820020	chr7_KI270803v1_alt:819970-820020	3	+	819970	820020	789624	1	50,	0,
#Deleted in new
chr7_KI270803v1_alt	820091	820139	chr7_KI270803v1_alt:820091-820139	3	+	820091	820139	789624	1	48,	0,
#Deleted in new
chr7_KI270803v1_alt	820211	820264	chr7_KI270803v1_alt:820211-820264	3	+	820211	820264	789624	1	53,	0,
#Deleted in new
chr7_KI270803v1_alt	820428	820475	chr7_KI270803v1_alt:820428-820475	3	+	820428	820475	789624	1	47,	0,
#Deleted in new
chr7_KI270803v1_alt	824013	825718	chr7_KI270803v1_alt:824013-825718	3	+	824013	825502	789624	4	387,18,107,243,	0,903,1064,1462,
#Deleted in new
chr7_KI270803v1_alt	835558	836372	chr7_KI270803v1_alt:835558-836372	3	-	835558	836260	8553170	2	292,155,	0,659,
#Deleted in new
chr7_KI270803v1_alt	878116	894129	chr7_KI270803v1_alt:878116-894129	3	+	886270	893947	789624	20	325,135,117,77,201,65,784,156,357,125,163,115,53,120,248,174,150,194,156,291,	0,5989,6944,7683,8053,8557,8892,10401,10886,11407,11832,12534,12923,13167,13418,13900,14743,15140,15456,15722,
#Deleted in new
chr7_KI270803v1_alt	878159	885832	chr7_KI270803v1_alt:878159-885832	0	+	878159	878159	8553170	4	282,135,134,33,	0,5946,6884,7640,
#Deleted in new
chr7_KI270803v1_alt	878179	894135	chr7_KI270803v1_alt:878179-894135	0	+	878179	878179	8553170	18	262,135,117,571,65,784,156,646,163,115,53,120,248,174,150,194,156,297,	0,5926,6881,7620,8494,8829,10338,10823,11769,12471,12860,13104,13355,13837,14680,15077,15393,15659,
#Deleted in new
chr7_KI270803v1_alt	878198	894129	chr7_KI270803v1_alt:878198-894129	0	+	886270	887061	789624	19	243,135,117,77,201,784,156,357,125,163,115,53,120,248,174,150,194,156,291,	0,5907,6862,7601,7971,8810,10319,10804,11325,11750,12452,12841,13085,13336,13818,14661,15058,15374,15640,
#Deleted in new
chr7_KI270803v1_alt	885078	894129	chr7_KI270803v1_alt:885078-894129	0	+	886270	887666	789624	19	99,77,201,65,297,216,156,357,125,128,115,53,120,248,174,150,194,156,291,	0,721,1091,1595,1930,2498,3439,3924,4445,4905,5572,5961,6205,6456,6938,7781,8178,8494,8760,
#Deleted in new
chr7_KI270803v1_alt	885799	894134	chr7_KI270803v1_alt:885799-894134	1	+	887722	893947	789624	16	77,197,784,156,357,125,163,115,53,120,248,174,150,194,156,296,	0,374,1209,2718,3203,3724,4149,4851,5240,5484,5735,6217,7060,7457,7773,8039,
#Deleted in new
chr7_KI270803v1_alt	885799	894134	chr7_KI270803v1_alt:885799-894134	1	+	886270	893947	789624	17	77,201,65,784,156,357,125,163,115,53,120,248,174,150,194,156,296,	0,370,874,1209,2718,3203,3724,4149,4851,5240,5484,5735,6217,7060,7457,7773,8039,
#Deleted in new
chr7_KI270803v1_alt	890324	894135	chr7_KI270803v1_alt:890324-894135	0	+	890324	890324	8553170	7	1079,248,174,150,194,156,297,	0,1210,1692,2535,2932,3248,3514,
#Deleted in new
chr7_KI270803v1_alt	892814	893658	chr7_KI270803v1_alt:892814-893658	0	+	892814	892814	8553170	3	195,194,86,	0,442,758,
#Deleted in new
chr7_KI270803v1_alt	892940	894134	chr7_KI270803v1_alt:892940-894134	0	+	892940	893727	789624	4	69,194,95,296,	0,316,693,898,
#Deleted in new
chr7_KI270803v1_alt	892973	894135	chr7_KI270803v1_alt:892973-894135	0	+	892973	893947	789624	3	36,194,297,	0,283,865,
#Deleted in new
chr7_KI270803v1_alt	894244	908802	chr7_KI270803v1_alt:894244-908802	1	-	894747	908556	789624	15	786,107,269,67,166,77,87,213,147,176,99,138,123,98,374,	0,1168,2243,2871,3286,3699,3873,4263,4553,5203,5534,5937,6446,6724,14184,
#Deleted in new
chr7_KI270803v1_alt	894250	899580	chr7_KI270803v1_alt:894250-899580	0	-	894250	894250	8553170	9	780,107,695,166,77,87,213,147,133,	0,1162,2237,3280,3693,3867,4257,4547,5197,
#Deleted in new
chr7_KI270803v1_alt	894254	908702	chr7_KI270803v1_alt:894254-908702	0	-	894254	894254	8553170	12	776,107,269,67,166,77,87,213,147,176,10,218,	0,1158,2233,2861,3276,3689,3863,4253,4543,5193,5524,14230,
#Deleted in new
chr7_KI270803v1_alt	894254	901066	chr7_KI270803v1_alt:894254-901066	0	-	894254	894254	8553170	12	776,107,269,67,166,77,87,213,147,176,99,885,	0,1158,2233,2861,3276,3689,3863,4253,4543,5193,5524,5927,
#Deleted in new
chr7_KI270803v1_alt	896853	899484	chr7_KI270803v1_alt:896853-899484	0	-	896853	896853	8553170	5	329,490,87,213,687,	0,677,1264,1654,1944,
#Deleted in new
chr7_KI270803v1_alt	897137	908785	chr7_KI270803v1_alt:897137-908785	2	-	897137	898002	789624	6	45,166,77,87,58,99,	0,393,806,980,1370,11549,
#Deleted in new
chr7_KI270803v1_alt	898875	915810	chr7_KI270803v1_alt:898875-915810	3	+	898875	898875	8553170	2	99,164,	0,16771,
#Deleted in new
chr7_KI270803v1_alt	899153	899848	chr7_KI270803v1_alt:899153-899848	0	-	899153	899153	8553170	2	470,70,	0,625,
#Deleted in new
chr7_KI270803v1_alt	899863	900995	chr7_KI270803v1_alt:899863-900995	0	-	899863	899863	8553170	3	14,632,27,	0,318,1105,
#Deleted in new
chr7_KI270803v1_alt	900279	901019	chr7_KI270803v1_alt:900279-901019	0	-	900835	901019	789624	3	40,156,51,	0,411,689,
#Deleted in new
chr7_KI270803v1_alt	931167	956875	chr7_KI270803v1_alt:931167-956875	1	-	931580	956526	789624	15	708,107,269,67,166,77,87,213,147,176,99,138,123,98,477,	0,1389,4381,6539,6780,7206,7381,17428,19987,20590,20921,21327,21957,22248,25231,
#Deleted in new
chr7_KI270803v1_alt	931580	956508	chr7_KI270803v1_alt:931580-956508	2	-	931580	956508	789624	14	295,107,269,67,166,77,87,213,176,99,138,123,98,110,	0,976,3968,6126,6367,6793,6968,17015,20177,20508,20914,21544,21835,24818,
#Deleted in new
chr7_KI270803v1_alt	947861	956790	chr7_KI270803v1_alt:947861-956790	1	-	948571	956526	789624	8	947,147,176,99,138,123,98,392,	0,3293,3896,4227,4633,5263,5554,8537,
#Deleted in new
chr7_KI270803v1_alt	962409	963911	chr7_KI270803v1_alt:962409-963911	3	+	962410	963654	789624	3	157,67,493,	0,345,1009,
#Deleted in new
chr7_KI270803v1_alt	962572	963932	chr7_KI270803v1_alt:962572-963932	1	+	962613	963654	789624	2	249,514,	0,846,
#Deleted in new
chr7_KI270803v1_alt	964180	985748	chr7_KI270803v1_alt:964180-985748	3	-	964318	985273	789624	19	300,96,170,68,111,101,78,99,111,130,149,189,63,147,125,177,142,78,478,	0,1320,1761,2162,2372,2669,3209,3529,5093,11395,12694,13070,13351,16713,17190,19814,20246,20681,21090,
#Deleted in new
chr7_KI270803v1_alt	965132	966906	chr7_KI270803v1_alt:965132-966906	0	-	965132	965132	8553170	4	464,73,111,57,	0,809,1420,1717,
#Deleted in new
chr7_KI270803v1_alt	965525	966221	chr7_KI270803v1_alt:965525-966221	0	-	965525	965525	8553170	2	71,280,	0,416,
#Deleted in new
chr7_KI270803v1_alt	966615	967983	chr7_KI270803v1_alt:966615-967983	0	-	966615	966615	8553170	4	48,101,78,274,	0,234,774,1094,
#Deleted in new
chr7_KI270803v1_alt	969140	985391	chr7_KI270803v1_alt:969140-985391	0	-	969140	969140	8553170	11	535,130,149,189,63,147,125,177,142,78,121,	0,6435,7734,8110,8391,11753,12230,14854,15286,15721,16130,
#Deleted in new
chr7_KI270803v1_alt	977352	981494	chr7_KI270803v1_alt:977352-981494	0	-	977352	977352	8553170	4	87,59,147,124,	0,179,3541,4018,
#Deleted in new
chr7_KI270803v1_alt	977410	985368	chr7_KI270803v1_alt:977410-985368	0	-	977410	985273	789624	6	29,125,177,142,78,98,	0,3960,6584,7016,7451,7860,
#Deleted in new
chr7_KI270803v1_alt	980896	985394	chr7_KI270803v1_alt:980896-985394	0	-	980896	984885	789624	6	144,125,177,142,74,124,	0,474,3098,3530,3965,4374,
#Deleted in new
chr7_KI270803v1_alt	981370	985215	chr7_KI270803v1_alt:981370-985215	0	-	981370	985215	789624	5	125,177,142,78,34,	0,2624,3056,3491,3811,
#Deleted in new
chr7_KI270803v1_alt	1049224	1050262	chr7_KI270803v1_alt:1049224-1050262	3	-	1049266	1050199	789624	1	1038,	0,
#Deleted in new
chr7_KI270803v1_alt	1070279	1070647	chr7_KI270803v1_alt:1070279-1070647	7	-	1070279	1070279	16724991	2	109,172,	0,196,
#Deleted in new
chr7_KI270803v1_alt	1075386	1076414	chr7_KI270803v1_alt:1075386-1076414	3	+	1075407	1076349	789624	1	1028,	0,
#Deleted in new
chr7_KI270803v1_alt	1085396	1086496	chr7_KI270803v1_alt:1085396-1086496	5	-	1085396	1085396	16724991	1	1100,	0,
#Deleted in new
chr7_KI270803v1_alt	1085396	1086652	chr7_KI270803v1_alt:1085396-1086652	7	-	1085396	1085396	16724991	2	1057,41,	0,1215,
#Deleted in new
chr7_KI270804v1_alt	27070	51782	chr7_KI270804v1_alt:27070-51782	3	-	27070	27070	8553170	3	600,157,120,	0,705,24592,
#Deleted in new
chr7_KI270804v1_alt	33136	36517	chr7_KI270804v1_alt:33136-36517	3	+	33136	33136	8553170	2	316,289,	0,3092,
#Deleted in new
chr7_KI270804v1_alt	91774	105162	chr7_KI270804v1_alt:91774-105162	3	-	91774	91774	8553170	4	419,122,87,34,	0,9318,12557,13354,
#Deleted in new
chr7_KI270804v1_alt	100242	101229	chr7_KI270804v1_alt:100242-101229	0	-	100242	100242	8553170	2	368,137,	0,850,
#Deleted in new
chr7_KI270804v1_alt	103810	105266	chr7_KI270804v1_alt:103810-105266	1	-	103810	103810	8553170	2	608,138,	0,1318,
#Deleted in new
chr7_KI270804v1_alt	104031	105238	chr7_KI270804v1_alt:104031-105238	0	-	104031	104031	8553170	2	483,110,	0,1097,
#Deleted in new
chr7_KI270804v1_alt	105401	111270	chr7_KI270804v1_alt:105401-111270	3	+	105401	105401	789624	2	2951,2057,	0,3812,
#Deleted in new
chr7_KI270804v1_alt	105535	109295	chr7_KI270804v1_alt:105535-109295	1	+	105535	105535	8553170	3	402,107,82,	0,2710,3678,
#Deleted in new
chr7_KI270804v1_alt	105582	109743	chr7_KI270804v1_alt:105582-109743	0	+	105582	105582	8553170	2	355,530,	0,3631,
#Deleted in new
chr7_KI270804v1_alt	108483	109628	chr7_KI270804v1_alt:108483-109628	0	+	108483	108483	8553170	2	141,412,	0,733,
#Deleted in new
chr7_KI270804v1_alt	121180	124376	chr7_KI270804v1_alt:121180-124376	3	-	121180	121180	8553170	1	3196,	0,
#Deleted in new
chr7_KI270804v1_alt	134323	135417	chr7_KI270804v1_alt:134323-135417	3	+	134323	134323	789624	3	365,109,94,	0,744,1000,
#Deleted in new
chr7_KI270804v1_alt	142338	153584	chr7_KI270804v1_alt:142338-153584	3	-	142338	142338	8553170	3	174,167,233,	0,713,11013,
#Deleted in new
chr7_KI270804v1_alt	152372	155136	chr7_KI270804v1_alt:152372-155136	3	+	152603	155136	789624	2	836,179,	0,2585,
#Deleted in new
chr7_KI270805v1_alt	53096	186331	chr7_KI270805v1_alt:53096-186331	0	+	53096	53096	8553170	4	101,114,129,219,	0,107127,132142,133016,
#Deleted in new
chr7_KI270805v1_alt	160223	160337	chr7_KI270805v1_alt:160223-160337	0	+	160223	160337	789624	1	114,	0,
#Deleted in new
chr7_KI270805v1_alt	160223	160337	chr7_KI270805v1_alt:160223-160337	0	+	160223	160337	789624	1	114,	0,
#Deleted in new
chr7_KI270805v1_alt	160223	160337	chr7_KI270805v1_alt:160223-160337	3	+	160223	160337	789624	1	114,	0,
#Deleted in new
chr7_KI270806v1_alt	1444	66825	chr7_KI270806v1_alt:1444-66825	5	+	1444	1444	16724991	11	92,100,78,87,60,81,102,72,47,100,139,	0,2798,5927,6767,15489,24110,26551,28421,30340,55116,65242,
#Deleted in new
chr7_KI270806v1_alt	1444	66755	chr7_KI270806v1_alt:1444-66755	5	+	1444	1444	16724991	15	92,100,78,87,60,81,102,72,47,25,120,175,100,126,69,	0,2798,5927,6767,15489,24110,26551,28421,30340,42034,43347,45039,55116,56526,65242,
#Deleted in new
chr7_KI270806v1_alt	1444	66965	chr7_KI270806v1_alt:1444-66965	5	+	1444	1444	16724991	16	92,69,100,78,87,60,81,102,72,47,25,120,175,100,126,279,	0,1782,2798,5927,6767,15489,24110,26551,28421,30340,42034,43347,45039,55116,56526,65242,
#Deleted in new
chr7_KI270806v1_alt	1444	66825	chr7_KI270806v1_alt:1444-66825	5	+	1444	1444	16724991	15	92,100,78,87,60,81,102,72,47,25,120,175,100,126,139,	0,2798,5927,6767,15489,24110,26551,28421,30340,42034,43347,45039,55116,56526,65242,
#Deleted in new
chr7_KI270806v1_alt	1444	66965	chr7_KI270806v1_alt:1444-66965	7	+	1444	1444	16724991	16	92,100,78,87,166,60,81,102,72,47,25,120,175,100,126,279,	0,2798,5927,6767,14274,15489,24110,26551,28421,30340,42034,43347,45039,55116,56526,65242,
#Deleted in new
chr7_KI270806v1_alt	79434	80148	chr7_KI270806v1_alt:79434-80148	3	+	79434	79434	8553170	1	714,	0,
#Deleted in new
chr7_KI270806v1_alt	92401	92720	chr7_KI270806v1_alt:92401-92720	7	+	92401	92401	16724991	2	232,33,	0,286,
#Deleted in new
chr7_KI270806v1_alt	95164	141642	chr7_KI270806v1_alt:95164-141642	1	+	115952	141300	0	5	282,310,647,115,468,	0,20772,29341,34390,46010,
#Deleted in new
chr7_KI270806v1_alt	95489	115969	chr7_KI270806v1_alt:95489-115969	0	+	115952	115969	8553170	3	398,144,33,	0,1141,20447,
#Deleted in new
chr7_KI270806v1_alt	95492	144953	chr7_KI270806v1_alt:95492-144953	3	+	115952	141300	0	6	422,310,647,115,131,3347,	0,20444,29013,34062,45682,46114,
#Deleted in new
chr7_KI270806v1_alt	95542	144951	chr7_KI270806v1_alt:95542-144951	1	+	115952	141300	0	5	139,310,647,115,3777,	0,20394,28963,34012,45632,
#Deleted in new
chr7_KI270806v1_alt	95625	124583	chr7_KI270806v1_alt:95625-124583	0	+	115952	124583	789624	3	177,310,78,	0,20311,28880,
#Deleted in new
chr7_KI270806v1_alt	95651	142219	chr7_KI270806v1_alt:95651-142219	1	+	115952	141300	0	5	263,310,647,115,1045,	0,20285,28854,33903,45523,
#Deleted in new
chr7_KI270806v1_alt	95748	117939	chr7_KI270806v1_alt:95748-117939	0	+	95748	95748	8553170	2	166,2003,	0,20188,
#Deleted in new
chr7_KI270806v1_alt	95836	144830	chr7_KI270806v1_alt:95836-144830	0	+	115952	141300	0	7	78,310,647,115,131,72,1319,	0,20100,28669,33718,45338,45770,47675,
#Deleted in new
chr7_KI270806v1_alt	102798	103389	chr7_KI270806v1_alt:102798-103389	7	+	102798	102798	16724991	1	591,	0,
#Deleted in new
chr7_KI270806v1_alt	124962	142205	chr7_KI270806v1_alt:124962-142205	0	+	124962	141300	789624	5	190,115,131,72,150,	0,4592,16212,16644,17093,
#Deleted in new
chr7_KI270806v1_alt	129388	144953	chr7_KI270806v1_alt:129388-144953	0	+	129388	129388	8553170	2	281,3779,	0,11786,
#Deleted in new
chr7_KI270806v1_alt	144964	158099	chr7_KI270806v1_alt:144964-158099	3	-	146175	158099	789624	4	1466,72,177,135,	0,2416,7111,13000,
#Deleted in new
chr7_KI270806v1_alt	144970	158099	chr7_KI270806v1_alt:144970-158099	0	-	146175	158099	789624	4	1460,72,177,135,	0,2410,7105,12994,
#Deleted in new
chr7_KI270806v1_alt	144970	158099	chr7_KI270806v1_alt:144970-158099	0	-	146175	158099	789624	3	1460,72,135,	0,2410,12994,
#Deleted in new
chr7_KI270806v1_alt	144977	158099	chr7_KI270806v1_alt:144977-158099	0	-	146175	158099	789624	3	1453,72,135,	0,2403,12987,
#Deleted in new
chr7_KI270806v1_alt	145814	149002	chr7_KI270806v1_alt:145814-149002	0	-	145814	145814	8553170	2	616,1622,	0,1566,
#Deleted in new
chr7_KI270806v1_alt	145865	158099	chr7_KI270806v1_alt:145865-158099	0	-	157806	158099	789624	4	565,72,69,135,	0,1515,11926,12099,
#Deleted in new
chr7_KI270806v1_alt	146045	158090	chr7_KI270806v1_alt:146045-158090	0	-	146175	158090	789624	3	385,177,126,	0,6030,11919,
#Deleted in new
chr7_KI270806v1_alt	146083	158099	chr7_KI270806v1_alt:146083-158099	0	-	146083	146083	8553170	4	347,72,177,135,	0,1297,5992,11881,
#Deleted in new
chr7_KI270806v1_alt	146291	158099	chr7_KI270806v1_alt:146291-158099	0	-	146291	158099	789624	2	139,135,	0,11673,
#Deleted in new
chr7_KI270806v1_alt	155118	156065	chr7_KI270806v1_alt:155118-156065	7	+	155118	155118	16724991	1	947,	0,
#Deleted in new
chr7_KI270807v1_alt	43483	44930	chr7_KI270807v1_alt:43483-44930	3	-	43483	43483	8553170	2	442,171,	0,1276,
#Deleted in new
chr7_KI270808v1_alt	2414	199374	chr7_KI270808v1_alt:2414-199374	0	+	2414	2414	8553170	6	237,134,94,240,81,363,	0,12358,49745,162896,190755,196597,
#Deleted in new
chr7_KI270808v1_alt	2414	199535	chr7_KI270808v1_alt:2414-199535	0	+	2414	199211	789624	6	237,134,94,240,81,524,	0,12358,49745,162896,190755,196597,
#Deleted in new
chr7_KI270808v1_alt	2414	204593	chr7_KI270808v1_alt:2414-204593	2	+	2414	199211	789624	6	237,134,94,240,81,5582,	0,12358,49745,162896,190755,196597,
#Deleted in new
chr7_KI270808v1_alt	124587	204593	chr7_KI270808v1_alt:124587-204593	1	+	165504	199211	789624	4	173,240,81,5582,	0,40723,68582,74424,
#Deleted in new
chr7_KI270808v1_alt	171300	171511	chr7_KI270808v1_alt:171300-171511	3	+	171300	171300	8553170	1	211,	0,
#Deleted in new
chr7_KI270808v1_alt	198342	199465	chr7_KI270808v1_alt:198342-199465	0	+	198342	198342	8553170	2	154,454,	0,669,
#Deleted in new
chr7_KI270808v1_alt	221903	222172	chr7_KI270808v1_alt:221903-222172	3	+	221903	221903	8553170	1	269,	0,
#Deleted in new
chr7_KI270808v1_alt	224593	261110	chr7_KI270808v1_alt:224593-261110	3	-	224593	224593	8553170	2	1524,153,	0,36364,
#Deleted in new
chr7_KI270808v1_alt	229380	229894	chr7_KI270808v1_alt:229380-229894	7	+	229380	229380	16724991	1	514,	0,
#Deleted in new
chr7_KI270809v1_alt	285	2008	chr7_KI270809v1_alt:285-2008	0	+	285	1371	789624	3	26,159,181,	0,1031,1542,
#Deleted in new
chr7_KI270809v1_alt	907	5010	chr7_KI270809v1_alt:907-5010	0	+	907	907	8553170	4	568,162,90,618,	0,1537,2467,3485,
#Deleted in new
chr7_KI270809v1_alt	1316	5014	chr7_KI270809v1_alt:1316-5014	0	+	1316	1316	8553170	4	159,162,90,622,	0,1128,2058,3076,
#Deleted in new
chr7_KI270809v1_alt	1316	5010	chr7_KI270809v1_alt:1316-5010	0	+	1316	4620	789624	4	159,162,90,618,	0,1128,2058,3076,
#Deleted in new
chr7_KI270809v1_alt	1316	5007	chr7_KI270809v1_alt:1316-5007	0	+	1316	4620	789624	4	159,162,90,615,	0,1128,2058,3076,
#Deleted in new
chr7_KI270809v1_alt	1316	4662	chr7_KI270809v1_alt:1316-4662	0	+	1316	4620	789624	4	159,162,90,270,	0,1128,2058,3076,
#Deleted in new
chr7_KI270809v1_alt	1316	5013	chr7_KI270809v1_alt:1316-5013	3	+	1316	4620	789624	4	159,162,90,621,	0,1128,2058,3076,
#Deleted in new
chr7_KI270809v1_alt	1316	1475	chr7_KI270809v1_alt:1316-1475	0	+	1316	1316	8553170	1	159,	0,
#Deleted in new
chr7_KI270809v1_alt	1316	5010	chr7_KI270809v1_alt:1316-5010	0	+	1316	4620	789624	4	159,162,90,618,	0,1128,2058,3076,
#Deleted in new
chr7_KI270809v1_alt	2385	4857	chr7_KI270809v1_alt:2385-4857	0	+	2385	2385	8553170	3	221,90,465,	0,989,2007,
#Deleted in new
chr7_KI270809v1_alt	9514	14763	chr7_KI270809v1_alt:9514-14763	3	+	9739	14291	789624	6	310,150,226,80,130,632,	0,475,1229,2657,3520,4617,
#Deleted in new
chr7_KI270809v1_alt	9611	14763	chr7_KI270809v1_alt:9611-14763	1	+	9739	14338	789624	4	528,226,130,632,	0,1132,3423,4520,
#Deleted in new
chr7_KI270809v1_alt	9701	14543	chr7_KI270809v1_alt:9701-14543	1	+	9739	14338	789624	5	123,150,226,130,412,	0,288,1042,3333,4430,
#Deleted in new
chr7_KI270809v1_alt	9841	10969	chr7_KI270809v1_alt:9841-10969	0	+	9841	9841	8553170	2	298,226,	0,902,
#Deleted in new
chr7_KI270809v1_alt	10621	13136	chr7_KI270809v1_alt:10621-13136	0	+	10621	10621	8553170	3	348,80,102,	0,1550,2413,
#Deleted in new
chr7_KI270809v1_alt	14645	19593	chr7_KI270809v1_alt:14645-19593	7	+	14645	14645	16724991	2	87,101,	0,4847,
#Deleted in new
chr7_KI270809v1_alt	18212	28359	chr7_KI270809v1_alt:18212-28359	1	-	20593	28359	789624	7	2441,244,86,59,231,219,160,	0,2563,4852,6169,7257,8816,9987,
#Deleted in new
chr7_KI270809v1_alt	18218	27424	chr7_KI270809v1_alt:18218-27424	1	-	20593	27287	789624	7	1477,105,244,86,59,231,396,	0,2330,2557,4846,6163,7251,8810,
#Deleted in new
chr7_KI270809v1_alt	20593	27287	chr7_KI270809v1_alt:20593-27287	3	-	20593	27287	789624	7	60,100,63,86,59,231,259,	0,182,363,2471,3788,4876,6435,
#Deleted in new
chr7_KI270809v1_alt	36193	114817	chr7_KI270809v1_alt:36193-114817	7	+	36193	36193	16724991	3	502,103,2062,	0,2061,76562,
#Deleted in new
chr7_KI270809v1_alt	36194	113113	chr7_KI270809v1_alt:36194-113113	4	+	36194	36194	16724991	3	501,103,358,	0,2060,76561,
#Deleted in new
chr7_KI270809v1_alt	36244	108223	chr7_KI270809v1_alt:36244-108223	4	+	36244	36244	16724991	4	246,59,170,273,	0,2054,66084,71706,
#Deleted in new
chr7_KI270809v1_alt	36451	38355	chr7_KI270809v1_alt:36451-38355	5	+	36451	36451	16724991	2	244,57,	0,1847,
#Deleted in new
chr7_KI270809v1_alt	96820	114075	chr7_KI270809v1_alt:96820-114075	1	-	97047	112899	789624	5	230,118,162,216,533,	0,8197,15536,16014,16722,
#Deleted in new
chr7_KI270809v1_alt	96820	114076	chr7_KI270809v1_alt:96820-114076	3	-	98299	112899	789624	7	230,138,92,118,162,216,534,	0,1468,1736,8197,15536,16014,16722,
#Deleted in new
chr7_KI270809v1_alt	96828	105135	chr7_KI270809v1_alt:96828-105135	0	-	98299	105135	789624	4	222,174,92,118,	0,1460,1728,8189,
#Deleted in new
chr7_KI270809v1_alt	96862	114096	chr7_KI270809v1_alt:96862-114096	0	-	98647	112899	789624	8	188,138,92,118,119,162,216,554,	0,1426,1694,8155,8469,15494,15972,16680,
#Deleted in new
chr7_KI270809v1_alt	98556	112962	chr7_KI270809v1_alt:98556-112962	0	-	98556	112899	789624	4	92,433,162,128,	0,6461,13800,14278,
#Deleted in new
chr7_KI270809v1_alt	137235	137732	chr7_KI270809v1_alt:137235-137732	7	-	137235	137235	16724991	1	497,	0,
#Deleted in new
chr7_KI270809v1_alt	145525	183908	chr7_KI270809v1_alt:145525-183908	3	-	145525	145525	8553170	2	273,100,	0,38283,
#Deleted in new
chr7_KI270899v1_alt	9789	27767	chr7_KI270899v1_alt:9789-27767	3	-	9789	9789	8553170	4	277,196,547,123,	0,3805,13580,17855,
#Deleted in new
chr7_KI270899v1_alt	23699	27822	chr7_KI270899v1_alt:23699-27822	0	-	23699	23699	8553170	3	217,112,178,	0,2291,3945,
#Deleted in new
chr7_KI270899v1_alt	29353	29799	chr7_KI270899v1_alt:29353-29799	7	+	29353	29353	16724991	1	446,	0,
#Deleted in new
chr7_KI270899v1_alt	63292	88004	chr7_KI270899v1_alt:63292-88004	3	-	63292	63292	8553170	3	600,157,120,	0,705,24592,
#Deleted in new
chr7_KI270899v1_alt	69358	72739	chr7_KI270899v1_alt:69358-72739	3	+	69358	69358	8553170	2	316,289,	0,3092,
#Deleted in new
chr7_KI270899v1_alt	128173	141683	chr7_KI270899v1_alt:128173-141683	3	-	128173	128173	8553170	4	419,122,87,34,	0,9441,12679,13476,
#Deleted in new
chr7_KI270899v1_alt	136764	137751	chr7_KI270899v1_alt:136764-137751	0	-	136764	136764	8553170	2	368,137,	0,850,
#Deleted in new
chr7_KI270899v1_alt	140331	141787	chr7_KI270899v1_alt:140331-141787	1	-	140331	140331	8553170	2	608,138,	0,1318,
#Deleted in new
chr7_KI270899v1_alt	140552	141759	chr7_KI270899v1_alt:140552-141759	0	-	140552	140552	8553170	2	483,110,	0,1097,
#Deleted in new
chr7_KI270899v1_alt	141917	147786	chr7_KI270899v1_alt:141917-147786	3	+	141917	141917	789624	2	2951,2057,	0,3812,
#Deleted in new
chr7_KI270899v1_alt	142051	145811	chr7_KI270899v1_alt:142051-145811	1	+	142051	142051	8553170	3	402,107,82,	0,2710,3678,
#Deleted in new
chr7_KI270899v1_alt	142098	146259	chr7_KI270899v1_alt:142098-146259	0	+	142098	142098	8553170	2	355,530,	0,3631,
#Deleted in new
chr7_KI270899v1_alt	144999	146144	chr7_KI270899v1_alt:144999-146144	0	+	144999	144999	8553170	2	141,412,	0,733,
#Deleted in new
chr7_KI270899v1_alt	154085	157293	chr7_KI270899v1_alt:154085-157293	3	-	154085	154085	8553170	1	3208,	0,
#Deleted in new
chr7_KI270899v1_alt	167240	168334	chr7_KI270899v1_alt:167240-168334	3	+	167240	167240	789624	3	365,109,94,	0,744,1000,
#Deleted in new
chr7_KI270899v1_alt	175255	186501	chr7_KI270899v1_alt:175255-186501	3	-	175255	175255	8553170	3	174,167,233,	0,713,11013,
#Deleted in new
chr7_KI270899v1_alt	185289	188053	chr7_KI270899v1_alt:185289-188053	3	+	185520	188053	789624	2	836,179,	0,2585,
#Deleted in new
chr7_KI270899v1_alt	187562	188053	chr7_KI270899v1_alt:187562-188053	0	+	187562	187562	8553170	2	86,179,	0,312,
#Deleted in new
chr7_KI270899v1_alt	187945	189896	chr7_KI270899v1_alt:187945-189896	0	+	187945	187945	8553170	2	108,446,	0,1505,
#Deleted in new
chr7_KV880764v1_fix	81202	115135	chr7_KV880764v1_fix:81202-115135	3	-	81336	115095	789624	10	221,147,183,234,264,83,269,83,135,106,	0,4346,8309,11355,14726,19445,21496,22510,29532,33827,
#Deleted in new
chr7_KV880765v1_fix	14482	48030	chr7_KV880765v1_fix:14482-48030	1	+	25415	46953	0	11	67,184,229,142,112,113,157,145,318,142,1095,	0,10918,13412,16840,17400,17608,20331,21212,26873,31199,32453,
#Deleted in new
chr7_KV880765v1_fix	14511	27937	chr7_KV880765v1_fix:14511-27937	0	+	25415	27937	8553170	4	38,298,184,43,	0,5458,10889,13383,
#Deleted in new
chr7_KV880765v1_fix	14521	28098	chr7_KV880765v1_fix:14521-28098	0	+	25415	28098	8553170	3	28,246,204,	0,10817,13373,
#Deleted in new
chr7_KV880765v1_fix	14536	48051	chr7_KV880765v1_fix:14536-48051	1	+	25415	46953	0	11	171,184,229,142,112,113,157,145,318,142,1116,	0,10864,13358,16786,17346,17554,20277,21158,26819,31145,32399,
#Deleted in new
chr7_KV880765v1_fix	15241	25500	chr7_KV880765v1_fix:15241-25500	0	+	25415	25500	8553170	2	411,162,	0,10097,
#Deleted in new
chr7_KV880765v1_fix	15288	20049	chr7_KV880765v1_fix:15288-20049	0	+	15288	15288	8553170	3	364,135,80,	0,3690,4681,
#Deleted in new
chr7_KV880765v1_fix	15290	28050	chr7_KV880765v1_fix:15290-28050	0	+	25415	28050	8553170	3	362,184,156,	0,10110,12604,
#Deleted in new
chr7_KV880765v1_fix	15294	47157	chr7_KV880765v1_fix:15294-47157	3	+	25415	46953	0	12	358,298,184,229,142,112,113,157,145,318,142,222,	0,4675,10106,12600,16028,16588,16796,19519,20400,26061,30387,31641,
#Deleted in new
chr7_KV880765v1_fix	25147	28058	chr7_KV880765v1_fix:25147-28058	0	+	25415	28058	8553170	2	437,164,	0,2747,
#Deleted in new
chr7_KV880765v1_fix	25399	46926	chr7_KV880765v1_fix:25399-46926	0	+	25399	25399	8553170	9	185,229,142,112,113,157,145,318,1245,	0,2495,5923,6483,6691,9414,10295,15956,20282,
#Deleted in new
chr7_KV880765v1_fix	25439	42644	chr7_KV880765v1_fix:25439-42644	0	+	25439	41677	8553170	8	145,229,142,112,113,157,145,1289,	0,2455,5883,6443,6651,9374,10255,15916,
#Deleted in new
chr7_KV880765v1_fix	31985	45822	chr7_KV880765v1_fix:31985-45822	0	+	31985	31985	8553170	4	9,113,318,141,	0,105,9370,13696,
#Deleted in new
chr7_KV880765v1_fix	35397	41495	chr7_KV880765v1_fix:35397-41495	0	+	35397	35397	8553170	2	442,140,	0,5958,
#Deleted in new
chr7_KV880765v1_fix	38080	38822	chr7_KV880765v1_fix:38080-38822	3	-	38080	38080	8553170	1	742,	0,
#Deleted in new
chr7_KV880765v1_fix	41369	45853	chr7_KV880765v1_fix:41369-45853	0	+	41369	45841	8553170	2	304,172,	0,4312,
#Deleted in new
chr7_KV880765v1_fix	41503	46976	chr7_KV880765v1_fix:41503-46976	0	+	41503	45689	8553170	4	170,80,142,41,	0,308,4178,5432,
#Deleted in new
chr7_KV880765v1_fix	47076	409695	chr7_KV880765v1_fix:47076-409695	3	-	49037	409644	789624	21	2076,80,127,77,238,104,111,100,162,205,82,78,113,166,131,121,70,55,58,140,238,	0,8971,9544,29060,34895,46841,56718,79745,82016,96587,122885,160482,160757,171048,210948,325815,346689,346856,352863,356554,362381,
#Deleted in new
chr7_KV880765v1_fix	48085	410169	chr7_KV880765v1_fix:48085-410169	1	-	49037	409644	789624	22	1067,80,127,77,238,104,63,111,100,162,205,82,78,113,166,131,121,70,55,58,140,712,	0,7962,8535,28051,33886,45832,54168,55709,78736,81007,95578,121876,159473,159748,170039,209939,324806,345680,345847,351854,355545,361372,
#Deleted in new
chr7_KV880765v1_fix	53369	409916	chr7_KV880765v1_fix:53369-409916	1	-	56043	409644	789624	21	2758,127,77,238,104,63,111,100,162,205,82,78,113,166,131,121,70,55,58,140,459,	0,3251,22767,28602,40548,48884,50425,73452,75723,90294,116592,154189,154464,164755,204655,319522,340396,340563,346570,350261,356088,
#Deleted in new
chr7_KV880765v1_fix	55976	98769	chr7_KV880765v1_fix:55976-98769	0	-	55976	55976	8553170	6	151,127,77,238,104,200,	0,644,20160,25995,37941,42593,
#Deleted in new
chr7_KV880765v1_fix	82076	104142	chr7_KV880765v1_fix:82076-104142	0	-	82076	82076	8553170	6	133,104,29,63,111,141,	0,11841,16493,20177,21718,21925,
#Deleted in new
chr7_KV880765v1_fix	82176	104142	chr7_KV880765v1_fix:82176-104142	0	-	82176	82176	8553170	5	33,104,29,63,348,	0,11741,16393,20077,21618,
#Deleted in new
chr7_KV880765v1_fix	207593	326607	chr7_KV880765v1_fix:207593-326607	0	-	207593	207593	8553170	5	43,113,166,131,121,	0,240,10531,50431,118893,
#Deleted in new
chr7_KV880765v1_fix	218124	394914	chr7_KV880765v1_fix:218124-394914	0	-	218124	218124	8553170	6	166,131,121,70,55,49,	0,39900,154767,175641,175808,176741,
#Deleted in new
chr7_KV880765v1_fix	295721	296001	chr7_KV880765v1_fix:295721-296001	7	+	295721	295721	16724991	1	280,	0,
#Deleted in new
chr7_KV880765v1_fix	315664	317196	chr7_KV880765v1_fix:315664-317196	0	+	315664	315664	8553170	3	32,250,178,	0,178,1354,
#Deleted in new
chr7_KV880765v1_fix	315706	321307	chr7_KV880765v1_fix:315706-321307	3	+	319708	321010	789624	3	386,931,1625,	0,1312,3976,
#Deleted in new
chr7_KV880765v1_fix	315887	318658	chr7_KV880765v1_fix:315887-318658	0	+	315887	315887	8553170	2	205,1640,	0,1131,
#Deleted in new
chr7_KV880765v1_fix	372891	409589	chr7_KV880765v1_fix:372891-409589	0	-	372891	409551	8553170	6	121,70,55,58,140,132,	0,20874,21041,27048,30739,36566,
#Deleted in new
chr7_KV880765v1_fix	393652	393987	chr7_KV880765v1_fix:393652-393987	0	-	393652	393652	8553170	2	183,55,	0,280,
#Deleted in new
chr7_KV880765v1_fix	409138	412843	chr7_KV880765v1_fix:409138-412843	0	+	409138	409138	8553170	3	263,89,139,	0,1104,3566,
#Deleted in new
chr7_KV880765v1_fix	409612	423670	chr7_KV880765v1_fix:409612-423670	0	+	412725	420877	789624	7	252,89,137,122,123,184,703,	0,630,3092,7187,11230,12451,13355,
#Deleted in new
chr7_KV880765v1_fix	409612	424119	chr7_KV880765v1_fix:409612-424119	3	+	412725	423215	789624	8	252,89,137,122,118,123,227,1152,	0,630,3092,7187,9746,11230,12408,13355,
#Deleted in new
chr7_KV880765v1_fix	409634	423564	chr7_KV880765v1_fix:409634-423564	0	+	412725	420877	789624	7	80,89,137,122,123,227,597,	0,608,3070,7165,11208,12386,13333,
#Deleted in new
chr7_KV880765v1_fix	409642	423505	chr7_KV880765v1_fix:409642-423505	0	+	412725	419480	8553170	8	260,89,137,122,180,123,227,538,	0,600,3062,7157,9716,11200,12378,13325,
#Deleted in new
chr7_KV880765v1_fix	409653	423960	chr7_KV880765v1_fix:409653-423960	0	+	412725	420877	8553170	6	678,137,122,123,227,993,	0,3051,7146,11189,12367,13314,
#Deleted in new
chr7_KV880765v1_fix	409679	420937	chr7_KV880765v1_fix:409679-420937	0	+	412725	413440	8553170	7	185,89,137,111,122,118,95,	0,563,3025,3730,7120,9679,11163,
#Deleted in new
chr7_KV880765v1_fix	409685	412802	chr7_KV880765v1_fix:409685-412802	0	+	409685	409685	8553170	2	646,98,	0,3019,
#Deleted in new
chr7_KV880765v1_fix	415722	422846	chr7_KV880765v1_fix:415722-422846	0	+	415722	415722	8553170	3	1199,123,826,	0,5120,6298,
#Deleted in new
chr7_KV880765v1_fix	419510	421397	chr7_KV880765v1_fix:419510-421397	0	+	419510	419510	8553170	2	28,555,	0,1332,
#Deleted in new
chr7_KV880765v1_fix	420547	423311	chr7_KV880765v1_fix:420547-423311	0	+	420547	420547	8553170	3	418,227,344,	0,1473,2420,
#Deleted in new
chr7_KV880765v1_fix	425211	425712	chr7_KV880765v1_fix:425211-425712	3	-	425211	425211	8553170	1	501,	0,
#Deleted in new
chr7_KV880765v1_fix	449017	449162	chr7_KV880765v1_fix:449017-449162	3	+	449017	449017	8553170	1	145,	0,
#Deleted in new
chr7_KZ208912v1_fix	443	10475	chr7_KZ208912v1_fix:443-10475	1	+	935	10046	789624	10	330,223,200,93,522,121,170,179,121,534,	0,477,1168,1513,1721,7139,7409,7687,8777,9498,
#Deleted in new
chr7_KZ208912v1_fix	658	2289	chr7_KZ208912v1_fix:658-2289	0	+	658	2289	8553170	4	115,200,93,125,	0,953,1298,1506,
#Deleted in new
chr7_KZ208912v1_fix	723	2599	chr7_KZ208912v1_fix:723-2599	0	+	723	723	8553170	4	50,223,438,435,	0,197,888,1441,
#Deleted in new
chr7_KZ208912v1_fix	724	2040	chr7_KZ208912v1_fix:724-2040	0	+	935	2040	8553170	3	419,200,84,	0,887,1232,
#Deleted in new
chr7_KZ208912v1_fix	938	10473	chr7_KZ208912v1_fix:938-10473	0	+	938	10046	789624	8	205,200,522,121,170,179,121,532,	0,673,1226,6644,6914,7192,8282,9003,
#Deleted in new
chr7_KZ208912v1_fix	1270	10473	chr7_KZ208912v1_fix:1270-10473	1	+	2019	10046	789624	9	185,200,93,522,121,170,179,121,532,	0,341,686,894,6312,6582,6860,7950,8671,
#Deleted in new
chr7_KZ208912v1_fix	1391	2604	chr7_KZ208912v1_fix:1391-2604	0	+	1391	1391	8553170	2	64,440,	0,773,
#Deleted in new
chr7_KZ208912v1_fix	2049	2164	chr7_KZ208912v1_fix:2049-2164	3	+	2049	2049	5263520	1	115,	0,
#Deleted in new
chr7_KZ208912v1_fix	2213	7864	chr7_KZ208912v1_fix:2213-7864	2	+	2213	7613	8553170	4	473,26,121,12,	0,4912,5369,5639,
#Deleted in new
chr7_KZ208912v1_fix	2363	8260	chr7_KZ208912v1_fix:2363-8260	0	+	3542	8260	8553170	6	323,156,26,121,170,130,	0,1090,4762,5219,5489,5767,
#Deleted in new
chr7_KZ208912v1_fix	7252	7961	chr7_KZ208912v1_fix:7252-7961	0	+	7252	7252	8553170	2	451,109,	0,600,
#Deleted in new
chr7_KZ208912v1_fix	9652	10755	chr7_KZ208912v1_fix:9652-10755	0	-	9652	9652	8553170	2	357,294,	0,809,
#Deleted in new
chr7_KZ208912v1_fix	10475	28256	chr7_KZ208912v1_fix:10475-28256	3	-	10820	28169	0	18	424,156,194,150,207,62,186,126,59,97,151,128,345,156,403,282,68,169,	0,508,2559,3082,3696,4009,4207,5273,6192,6449,6808,7209,7489,8146,8539,10212,16499,17612,
#Deleted in new
chr7_KZ208912v1_fix	10774	28169	chr7_KZ208912v1_fix:10774-28169	0	-	10774	10774	8553170	16	125,156,194,150,62,186,126,59,97,151,625,156,403,282,68,82,	0,209,2260,2783,3710,3908,4974,5893,6150,6509,6910,7847,8240,9913,16200,17313,
#Deleted in new
chr7_KZ208912v1_fix	13573	14965	chr7_KZ208912v1_fix:13573-14965	0	-	13573	13573	8553170	4	134,207,62,283,	0,598,911,1109,
#Deleted in new
chr7_KZ208912v1_fix	14170	16045	chr7_KZ208912v1_fix:14170-16045	0	-	14170	14170	8553170	4	208,62,186,297,	0,314,512,1578,
#Deleted in new
chr7_KZ208912v1_fix	16844	18076	chr7_KZ208912v1_fix:16844-18076	0	-	16844	16844	8553170	4	177,151,128,112,	0,439,840,1120,
#Deleted in new
chr7_KZ208912v1_fix	20189	27014	chr7_KZ208912v1_fix:20189-27014	0	-	20189	20189	8553170	2	780,40,	0,6785,
#Deleted in new
chr7_KZ208912v1_fix	27176	142813	chr7_KZ208912v1_fix:27176-142813	3	+	27176	27176	789624	5	74,132,57,236,4519,	0,7255,96961,110469,111118,
#Deleted in new
chr7_KZ208912v1_fix	27196	35194	chr7_KZ208912v1_fix:27196-35194	0	+	27196	27196	8553170	3	58,132,294,	0,7235,7704,
#Deleted in new
chr7_KZ208912v1_fix	56397	57337	chr7_KZ208912v1_fix:56397-57337	7	+	56397	56397	16724991	1	940,	0,
#Deleted in new
chr7_KZ208912v1_fix	62816	63773	chr7_KZ208912v1_fix:62816-63773	3	+	62816	63773	789624	1	957,	0,
#Deleted in new
chr7_KZ208912v1_fix	97236	98160	chr7_KZ208912v1_fix:97236-98160	3	+	97236	98160	789624	1	924,	0,
#Deleted in new
chr7_KZ208912v1_fix	107825	108766	chr7_KZ208912v1_fix:107825-108766	7	-	107825	107825	16724991	1	941,	0,
#Deleted in new
chr7_KZ208912v1_fix	128619	138833	chr7_KZ208912v1_fix:128619-138833	3	-	130296	131275	789624	3	2678,145,75,	0,4484,10139,
#Deleted in new
chr7_KZ208912v1_fix	152112	152528	chr7_KZ208912v1_fix:152112-152528	7	-	152112	152112	16724991	1	416,	0,
#Deleted in new
chr7_KZ208912v1_fix	161308	161976	chr7_KZ208912v1_fix:161308-161976	7	-	161308	161308	16724991	3	348,45,273,	0,349,395,
#Deleted in new
chr7_KZ208912v1_fix	164549	166099	chr7_KZ208912v1_fix:164549-166099	7	-	164549	164549	16724991	2	1124,93,	0,1457,
#Deleted in new
chr7_KZ208912v1_fix	191164	193751	chr7_KZ208912v1_fix:191164-193751	3	+	191181	193515	789624	1	2587,	0,
#Deleted in new
chr7_KZ208912v1_fix	264003	269046	chr7_KZ208912v1_fix:264003-269046	1	+	264003	269046	789624	5	991,98,214,240,368,	0,1598,2973,3526,4675,
#Deleted in new
chr7_KZ208912v1_fix	264003	269046	chr7_KZ208912v1_fix:264003-269046	3	+	264003	269046	8553170	5	991,98,214,240,368,	0,1598,2973,3526,4675,
#Deleted in new
chr7_KZ208912v1_fix	298948	299051	chr7_KZ208912v1_fix:298948-299051	3	-	298948	298948	8553170	1	103,	0,
#Deleted in new
chr7_KZ208912v1_fix	299409	302017	chr7_KZ208912v1_fix:299409-302017	3	-	299645	301979	789624	1	2608,	0,
#Deleted in new
chr7_KZ208912v1_fix	306110	381009	chr7_KZ208912v1_fix:306110-381009	7	-	306110	306110	16724991	5	113,154,79,159,66,	0,214,49738,51812,74833,
#Deleted in new
chr7_KZ208912v1_fix	331167	331835	chr7_KZ208912v1_fix:331167-331835	7	+	331167	331167	16724991	3	273,45,348,	0,274,320,
#Deleted in new
chr7_KZ208912v1_fix	340591	341017	chr7_KZ208912v1_fix:340591-341017	7	+	340591	340591	16724991	1	426,	0,
#Deleted in new
chr7_KZ208912v1_fix	345027	362275	chr7_KZ208912v1_fix:345027-362275	7	+	345027	345027	16724991	8	137,147,992,98,214,240,338,255,	0,5845,9262,10862,12238,12791,13940,16993,
#Deleted in new
chr7_KZ208912v1_fix	353873	380990	chr7_KZ208912v1_fix:353873-380990	4	-	353873	353873	16724991	5	122,141,79,159,47,	0,330,1975,4049,27070,
#Deleted in new
chr7_KZ208912v1_fix	354672	359177	chr7_KZ208912v1_fix:354672-359177	4	+	354672	354672	16724991	5	609,573,214,240,210,	0,742,2593,3146,4295,
#Deleted in new
chr7_KZ208912v1_fix	355690	381010	chr7_KZ208912v1_fix:355690-381010	4	-	355690	355690	16724991	3	237,159,67,	0,2232,25253,
#Deleted in new
chr7_KZ208912v1_fix	356269	381237	chr7_KZ208912v1_fix:356269-381237	5	-	356269	356269	16724991	2	1812,294,	0,24674,
#Deleted in new
chr7_KZ208912v1_fix	356270	381012	chr7_KZ208912v1_fix:356270-381012	4	-	356270	356270	16724991	3	1811,637,69,	0,21275,24673,
#Deleted in new
chr7_KZ208912v1_fix	356272	380512	chr7_KZ208912v1_fix:356272-380512	4	-	356272	356272	16724991	3	1809,637,52,	0,21273,24188,
#Deleted in new
chr7_KZ208912v1_fix	357636	380974	chr7_KZ208912v1_fix:357636-380974	4	-	357636	357636	16724991	3	445,113,31,	0,22824,23307,
#Deleted in new
chr7_KZ208912v1_fix	357760	380529	chr7_KZ208912v1_fix:357760-380529	4	-	357760	357760	16724991	3	321,155,69,	0,20267,22700,
#Deleted in new
chr7_KZ208912v1_fix	377543	378168	chr7_KZ208912v1_fix:377543-378168	5	-	377543	377543	16724991	1	625,	0,
#Deleted in new
chr7_KZ208912v1_fix	420331	420832	chr7_KZ208912v1_fix:420331-420832	1	-	420331	420832	8553170	1	501,	0,
#Deleted in new
chr7_KZ208912v1_fix	420331	420832	chr7_KZ208912v1_fix:420331-420832	3	-	420331	420832	8553170	1	501,	0,
#Deleted in new
chr7_KZ208912v1_fix	479394	480508	chr7_KZ208912v1_fix:479394-480508	3	+	479461	480415	789624	1	1114,	0,
#Deleted in new
chr7_KZ208912v1_fix	499073	508590	chr7_KZ208912v1_fix:499073-508590	3	+	504200	505154	789624	3	260,156,4413,	0,4109,5104,
#Deleted in new
chr7_KZ208912v1_fix	499240	508590	chr7_KZ208912v1_fix:499240-508590	0	+	499240	499240	8553170	4	93,156,47,3730,	0,3942,4937,5620,
#Deleted in new
chr7_KZ208912v1_fix	503192	541542	chr7_KZ208912v1_fix:503192-541542	0	+	503192	503192	8553170	3	146,87,172,	0,29215,38178,
#Deleted in new
chr7_KZ208912v1_fix	504156	505245	chr7_KZ208912v1_fix:504156-505245	1	+	504200	505154	789624	1	1089,	0,
#Deleted in new
chr7_KZ208912v1_fix	523350	524455	chr7_KZ208912v1_fix:523350-524455	7	-	523350	523350	16724991	2	463,235,	0,870,
#Deleted in new
chr7_KZ208912v1_fix	525134	526050	chr7_KZ208912v1_fix:525134-526050	7	+	525134	525134	16724991	1	916,	0,
#Deleted in new
chr7_KZ208912v1_fix	529371	530881	chr7_KZ208912v1_fix:529371-530881	7	+	529371	529371	16724991	1	1510,	0,
#Deleted in new
chr7_KZ208912v1_fix	544549	553023	chr7_KZ208912v1_fix:544549-553023	3	+	548226	549162	789624	2	331,4822,	0,3652,
#Deleted in new
chr7_KZ208912v1_fix	548158	549213	chr7_KZ208912v1_fix:548158-549213	1	+	548226	549162	789624	1	1055,	0,
#Deleted in new
chr7_KZ208913v1_alt	3521	13419	chr7_KZ208913v1_alt:3521-13419	0	+	3521	3521	8553170	2	186,378,	0,9520,
#Deleted in new
chr7_KZ208913v1_alt	3521	13419	chr7_KZ208913v1_alt:3521-13419	3	+	4975	5911	789624	2	186,8495,	0,1403,
#Deleted in new
chr7_KZ208913v1_alt	4941	5954	chr7_KZ208913v1_alt:4941-5954	1	+	4975	5911	789624	1	1013,	0,
#Deleted in new
chr7_KZ208913v1_alt	28796	29726	chr7_KZ208913v1_alt:28796-29726	1	+	28796	29726	789624	1	930,	0,
#Deleted in new
chr7_KZ208913v1_alt	28796	29726	chr7_KZ208913v1_alt:28796-29726	3	+	28796	29726	789624	1	930,	0,
#Deleted in new
chr7_KZ208913v1_alt	32301	32406	chr7_KZ208913v1_alt:32301-32406	7	+	32301	32301	16724991	1	105,	0,
#Deleted in new
chr7_KZ208913v1_alt	40839	53519	chr7_KZ208913v1_alt:40839-53519	3	+	49673	50606	789624	2	266,3897,	0,8783,
#Deleted in new
chr7_KZ208913v1_alt	49613	50659	chr7_KZ208913v1_alt:49613-50659	1	+	49673	50606	789624	1	1046,	0,
#Deleted in new
chr7_KZ208913v1_alt	64073	65124	chr7_KZ208913v1_alt:64073-65124	3	+	64142	65099	789624	1	1051,	0,
#Deleted in new
chr7_KZ208913v1_alt	73010	73910	chr7_KZ208913v1_alt:73010-73910	7	-	73010	73010	16724991	1	900,	0,
#Deleted in new
chr7_KZ208913v1_alt	83670	84597	chr7_KZ208913v1_alt:83670-84597	1	+	83670	84597	5263520	1	927,	0,
#Deleted in new
chr7_KZ208913v1_alt	83670	84597	chr7_KZ208913v1_alt:83670-84597	3	+	83670	84597	8553170	1	927,	0,
#Deleted in new
chr7_KZ208913v1_alt	96564	97494	chr7_KZ208913v1_alt:96564-97494	7	+	96564	96564	16724991	1	930,	0,
#Deleted in new
chr7_KZ208913v1_alt	138030	140618	chr7_KZ208913v1_alt:138030-140618	3	+	138068	140402	789624	1	2588,	0,
#Deleted in new
chr7_KZ208913v1_alt	140647	150216	chr7_KZ208913v1_alt:140647-150216	3	-	141493	142948	789624	2	2313,118,	0,9451,
#Deleted in new
chr7_KZ208913v1_alt	186516	187437	chr7_KZ208913v1_alt:186516-187437	1	-	186516	187437	789624	1	921,	0,
#Deleted in new
chr7_KZ208913v1_alt	186516	187437	chr7_KZ208913v1_alt:186516-187437	3	-	186516	187437	789624	1	921,	0,
#Deleted in new
chr7_KZ208913v1_alt	204638	210838	chr7_KZ208913v1_alt:204638-210838	7	-	204638	204638	16724991	5	1566,56,263,224,64,	0,3488,4389,5464,6136,
#Deleted in new
chr7_KZ208913v1_alt	204638	207551	chr7_KZ208913v1_alt:204638-207551	5	-	204638	204638	16724991	1	2913,	0,
#Deleted in new
chr7_KZ208913v1_alt	205264	206197	chr7_KZ208913v1_alt:205264-206197	5	-	205264	205264	16724991	1	933,	0,
#Deleted in new
chr7_KZ208913v1_alt	206255	210838	chr7_KZ208913v1_alt:206255-210838	5	-	206255	206255	16724991	5	831,56,93,224,64,	0,1871,2942,3847,4519,
#Deleted in new
chr7_KZ208913v1_alt	212256	219386	chr7_KZ208913v1_alt:212256-219386	3	-	213289	214222	789624	2	1970,92,	0,7038,
#Deleted in new
chr7_KZ208913v1_alt	213200	214316	chr7_KZ208913v1_alt:213200-214316	1	-	213289	214222	789624	1	1116,	0,
#Deleted in new
chr7_KZ208913v1_alt	221294	223882	chr7_KZ208913v1_alt:221294-223882	3	-	221510	223844	789624	1	2588,	0,
#Deleted in new
chr7_KZ208913v1_alt	249066	255538	chr7_KZ208913v1_alt:249066-255538	7	+	249066	249066	16724991	3	158,263,1569,	0,1818,4903,
#Deleted in new
chr7_KZ208913v1_alt	250884	255538	chr7_KZ208913v1_alt:250884-255538	5	+	250884	250884	16724991	3	263,197,1569,	0,2203,3085,
#Deleted in new
chr7_KZ208913v1_alt	252622	255535	chr7_KZ208913v1_alt:252622-255535	4	+	252622	252622	16724991	1	2913,	0,
#Deleted in new
chr7_KZ208913v1_alt	253976	254909	chr7_KZ208913v1_alt:253976-254909	5	+	253976	253976	16724991	1	933,	0,
#Deleted in new
chr7_KZ208913v1_alt	272735	273656	chr7_KZ208913v1_alt:272735-273656	1	+	272735	273656	789624	1	921,	0,
#Deleted in new
chr7_KZ208913v1_alt	272735	273656	chr7_KZ208913v1_alt:272735-273656	3	+	272735	273656	789624	1	921,	0,
#Deleted in new
chr7_KZ208913v1_alt	315223	328230	chr7_KZ208913v1_alt:315223-328230	1	+	315223	328230	789624	11	3154,58,65,254,161,153,130,75,90,158,163,	0,3685,4176,4432,8491,9207,9629,10013,10525,12062,12844,
#Deleted in new
chr7_KZ208913v1_alt	315223	328230	chr7_KZ208913v1_alt:315223-328230	3	+	315223	328230	789624	11	3154,58,65,254,161,153,130,75,90,158,163,	0,3685,4176,4432,8491,9207,9629,10013,10525,12062,12844,
#Deleted in new
chr7_KZ208913v1_alt	332938	335269	chr7_KZ208913v1_alt:332938-335269	1	+	332938	335269	789624	1	2331,	0,
#Deleted in new
chr7_KZ208913v1_alt	332938	335269	chr7_KZ208913v1_alt:332938-335269	3	+	332938	335269	789624	1	2331,	0,
#Deleted in new
chr7_KZ208913v1_alt	342565	343495	chr7_KZ208913v1_alt:342565-343495	1	+	342565	343495	789624	1	930,	0,
#Deleted in new
chr7_KZ208913v1_alt	342565	343495	chr7_KZ208913v1_alt:342565-343495	3	+	342565	343495	789624	1	930,	0,
#Deleted in new
chr7_KZ208913v1_alt	350596	350890	chr7_KZ208913v1_alt:350596-350890	1	+	350596	350890	789624	1	294,	0,
#Deleted in new
chr7_KZ208913v1_alt	350596	350890	chr7_KZ208913v1_alt:350596-350890	3	+	350596	350890	789624	1	294,	0,
#Deleted in new
chr7_KZ208913v1_alt	369355	370276	chr7_KZ208913v1_alt:369355-370276	1	+	369355	370276	789624	1	921,	0,
#Deleted in new
chr7_KZ208913v1_alt	369355	370276	chr7_KZ208913v1_alt:369355-370276	3	+	369355	370276	789624	1	921,	0,
#Deleted in new
chr7_KZ208913v1_alt	412141	429525	chr7_KZ208913v1_alt:412141-429525	1	+	412141	429525	789624	14	3154,58,65,254,161,153,130,75,90,158,162,71,105,155,	0,3685,4176,4432,8491,9207,9629,10013,10525,12062,12844,14450,16092,17229,
#Deleted in new
chr7_KZ208913v1_alt	412141	429525	chr7_KZ208913v1_alt:412141-429525	3	+	412141	429525	789624	14	3154,58,65,254,161,153,130,75,90,158,162,71,105,155,	0,3685,4176,4432,8491,9207,9629,10013,10525,12062,12844,14450,16092,17229,
#Deleted in new
chr7_KZ208913v1_alt	446706	459685	chr7_KZ208913v1_alt:446706-459685	1	-	446706	459685	789624	10	302,305,229,86,107,203,552,82,125,85,	0,1042,1710,2157,2517,2870,3806,4629,7307,12894,
#Deleted in new
chr7_KZ208913v1_alt	446706	453156	chr7_KZ208913v1_alt:446706-453156	1	-	446706	453156	789624	8	302,305,229,86,107,107,552,37,	0,1042,1710,2157,2517,2966,3806,6413,
#Deleted in new
chr7_KZ208913v1_alt	446706	459685	chr7_KZ208913v1_alt:446706-459685	1	-	446706	459685	789624	10	302,305,229,86,107,107,552,82,125,85,	0,1042,1710,2157,2517,2966,3806,4629,7307,12894,
#Deleted in new
chr7_KZ208913v1_alt	446977	453156	chr7_KZ208913v1_alt:446977-453156	2	-	446977	453156	789624	7	31,305,229,86,107,107,37,	0,771,1439,1886,2246,2695,6142,
#Deleted in new
chr7_KZ208913v1_alt	484281	484770	chr7_KZ208913v1_alt:484281-484770	7	-	484281	484281	16724991	1	489,	0,
#Deleted in new
chr7_KZ208913v1_alt	501137	501274	chr7_KZ208913v1_alt:501137-501274	3	+	501137	501137	8553170	1	137,	0,
#Deleted in new
chr7_KZ559106v1_alt	62752	169981	chr7_KZ559106v1_alt:62752-169981	3	-	62752	62752	8553170	2	1992,226,	0,107003,
#Deleted in new
chr7_KZ559106v1_alt	64217	64371	chr7_KZ559106v1_alt:64217-64371	7	+	64217	64217	16724991	1	154,	0,
#Deleted in new
chr7_KZ559106v1_alt	77466	170053	chr7_KZ559106v1_alt:77466-170053	1	-	77466	77466	8553170	4	669,95,308,298,	0,27128,45345,92289,
#Deleted in new
chr7_KZ559106v1_alt	77466	169961	chr7_KZ559106v1_alt:77466-169961	0	-	77466	77466	8553170	2	669,206,	0,92289,
#Deleted in new
chr7_KZ559106v1_alt	77466	169981	chr7_KZ559106v1_alt:77466-169981	0	-	77466	77466	8553170	2	669,209,	0,92306,
#Deleted in new
chr7_KZ559106v1_alt	151143	151469	chr7_KZ559106v1_alt:151143-151469	7	-	151143	151143	16724991	1	326,	0,
#Deleted in new
chr8	64090	64320	chr8:64090-64320	7	-	64090	64090	16724991	2	85,52,	0,178,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	72600	79775	chr8:72600-79775	3	+	72600	72600	8553170	2	73,871,	0,6304,
#Partially deleted in new
chr8	72616	79244	chr8:72616-79244	0	+	72616	72616	8553170	2	85,340,	0,6288,
#Deleted in new
chr8	150583	150728	chr8:150583-150728	7	-	150583	150583	16724991	1	145,	0,
#Partially deleted in new
chr8	155273	155481	chr8:155273-155481	7	+	155273	155273	16724991	1	208,	0,
#Deleted in new
chr8	166048	167043	chr8:166048-167043	3	-	166085	167024	789624	1	995,	0,
#Deleted in new
chr8	200384	200562	chr8:200384-200562	7	-	200384	200384	16724991	1	178,	0,
#Deleted in new
chr8	202659	202897	chr8:202659-202897	7	-	202659	202659	16724991	2	88,76,	0,162,
#Partially deleted in new
chr8	213185	232211	chr8:213185-232211	7	-	213185	213185	16724991	3	525,128,83,	0,6104,18943,
#Deleted in new
chr8	213250	213707	chr8:213250-213707	5	-	213250	213250	16724991	1	457,	0,
#Partially deleted in new
chr8	232136	247340	chr8:232136-247340	3	+	240895	246362	789624	6	131,84,127,84,83,2187,	0,8687,10750,11585,12482,13017,
#Partially deleted in new
chr8	232136	245287	chr8:232136-245287	0	+	240895	245287	789624	6	131,84,127,84,83,134,	0,8687,10750,11585,12482,13017,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	232183	245436	chr8:232183-245436	0	+	232183	232183	8553170	4	232,84,1815,283,	0,8640,10703,12970,
#Partially deleted in new
chr8	232199	247342	chr8:232199-247342	1	+	240895	246362	789624	6	216,84,127,84,83,2189,	0,8624,10687,11522,12419,12954,
#Partially deleted in new
chr8	232216	264703	chr8:232216-264703	1	+	240895	264173	789624	8	51,84,127,84,83,111,89,534,	0,8607,10670,11505,12402,12937,28850,31953,
#Partially deleted in new
chr8	232237	245550	chr8:232237-245550	0	+	240895	243816	789624	6	178,84,127,137,83,397,	0,8586,10649,11484,12381,12916,
#Partially deleted in new
chr8	232383	245248	chr8:232383-245248	0	+	240895	245248	789624	6	241,84,127,84,83,95,	0,8440,10503,11338,12235,12770,
#Partially deleted in new
chr8	232396	247340	chr8:232396-247340	1	+	240895	246362	789624	6	298,84,127,84,83,2187,	0,8427,10490,11325,12222,12757,
#Partially deleted in new
chr8	232421	243801	chr8:232421-243801	0	+	240895	243801	789624	4	273,84,127,80,	0,8402,10465,11300,
#Partially deleted in new
chr8	232441	243005	chr8:232441-243005	0	+	240895	243005	789624	4	183,195,84,119,	0,7860,8382,10445,
#Partially deleted in new
chr8	232455	245159	chr8:232455-245159	0	+	242979	245159	789624	6	169,84,96,84,83,6,	0,8368,10462,11266,12163,12698,
#Partially deleted in new
chr8	232585	242900	chr8:232585-242900	0	+	232585	232585	8553170	3	464,84,14,	0,8238,10301,
#Deleted in new
chr8	233118	233692	chr8:233118-233692	3	+	233118	233118	8553170	1	574,	0,
#Deleted in new
chr8	234346	234887	chr8:234346-234887	3	-	234346	234346	8553170	1	541,	0,
#Deleted in new
chr8	237044	237669	chr8:237044-237669	3	+	237044	237044	8553170	1	625,	0,
#Partially deleted in new
chr8	240634	244654	chr8:240634-244654	0	+	240634	240634	8553170	4	273,127,84,36,	0,2252,3087,3984,
#Deleted in new
chr8	264314	264672	chr8:264314-264672	7	+	264314	264314	16724991	1	358,	0,
#Partially deleted in new
chr8	311132	331026	chr8:311132-331026	3	-	311132	311132	8553170	3	153,69,147,	0,19131,19747,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	375930	383174	chr8:375930-383174	0	-	375930	375930	789624	4	1115,2746,37,115,	0,1633,5225,7129,
#Deleted in new
chr8	376242	377759	chr8:376242-377759	0	-	376242	376242	8553170	1	1517,	0,
#Deleted in new
chr8	377778	378637	chr8:377778-378637	7	-	377778	377778	16724991	2	462,396,	0,463,
#Deleted in new
chr8	379087	383174	chr8:379087-383174	0	-	379087	379087	8553170	4	371,402,37,115,	0,820,2068,3972,
#Partially deleted in new
chr8	406427	435700	chr8:406427-435700	0	+	413079	435700	789624	5	251,141,104,50,86,	0,6645,24913,26458,29187,
#Partially deleted in new
chr8	406807	469690	chr8:406807-469690	1	+	413079	468804	789624	10	259,141,104,50,93,94,185,183,144,976,	0,6265,24533,26078,28807,43182,44461,51561,56199,61907,
#Partially deleted in new
chr8	406807	469871	chr8:406807-469871	1	+	431357	468804	789624	9	259,141,104,93,94,185,183,144,1157,	0,6265,24533,28807,43182,44461,51561,56199,61907,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr8	406954	477967	chr8:406954-477967	3	+	413079	468804	789624	11	112,141,104,50,93,94,185,183,144,27,9253,	0,6118,24386,25931,28660,43035,44314,51414,56052,60765,61760,
#Partially deleted in new
chr8	413071	469873	chr8:413071-469873	1	+	431357	468804	789624	8	142,104,93,94,185,183,144,1159,	0,18269,22543,36918,38197,45297,49935,55643,
#Partially deleted in new
chr8	420396	451320	chr8:420396-451320	0	+	420396	420396	8553170	5	52,104,93,94,52,	0,10944,15218,29593,30872,
#Partially deleted in new
chr8	435447	451380	chr8:435447-451380	0	+	435447	435447	8553170	3	260,94,112,	0,14542,15821,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	450713	451343	chr8:450713-451343	3	-	450713	450713	8553170	1	630,	0,
#Partially deleted in new
chr8	458368	468014	chr8:458368-468014	0	+	458368	458368	8553170	4	183,144,27,64,	0,4638,9351,9582,
#Partially deleted in new
chr8	458509	468180	chr8:458509-468180	0	+	458509	458509	8553170	3	42,144,461,	0,4497,9210,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	468714	471225	chr8:468714-471225	0	+	468714	468804	789624	2	166,660,	0,1851,
#Deleted in new
chr8	486116	488512	chr8:486116-488512	3	-	486116	486116	8553170	1	2396,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	489791	544845	chr8:489791-544845	1	-	491571	544757	789624	4	1879,286,104,196,	0,2667,4702,54858,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	489791	545781	chr8:489791-545781	3	-	492398	544757	789624	4	2953,104,196,168,	0,4702,54858,55822,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	489802	544998	chr8:489802-544998	1	-	492398	544757	789624	3	2942,104,349,	0,4691,54847,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	489802	545781	chr8:489802-545781	1	-	491571	544757	789624	5	1868,286,104,196,168,	0,2656,4691,54847,55811,
#Partially deleted in new
chr8	614745	731197	chr8:614745-731197	3	-	615222	731161	789624	4	539,195,759,58,	0,53852,58543,116394,
#Partially deleted in new
chr8	614748	673326	chr8:614748-673326	0	-	627098	673326	789624	4	1833,1564,195,38,	0,10926,53849,58540,
#Partially deleted in new
chr8	616525	640632	chr8:616525-640632	0	-	616525	616525	8553170	4	56,294,236,50,	0,9149,10477,24057,
#Deleted in new
chr8	637535	641207	chr8:637535-641207	0	-	637535	637535	8553170	3	60,252,94,	0,3047,3578,
#Partially deleted in new
chr8	664199	731239	chr8:664199-731239	1	-	664602	731161	789624	6	477,195,759,135,147,100,	0,4398,9089,28278,51661,66940,
#Deleted in new
chr8	664621	669277	chr8:664621-669277	0	-	664621	664621	8553170	2	55,680,	0,3976,
#Deleted in new
chr8	665991	673657	chr8:665991-673657	0	-	668490	673657	789624	2	2801,369,	0,7297,
#Deleted in new
chr8	671793	673462	chr8:671793-673462	0	-	671793	671793	8553170	2	411,174,	0,1495,
#Partially deleted in new
chr8	673766	715927	chr8:673766-715927	0	-	673766	673766	8553170	4	281,199,135,67,	0,17131,18711,42094,
#Partially deleted in new
chr8	673843	686724	chr8:673843-686724	0	-	673843	673843	8553170	2	204,83,	0,12798,
#Partially deleted in new
chr8	673864	738106	chr8:673864-738106	0	-	673864	673864	8553170	4	183,135,147,323,	0,18613,41996,63919,
#Deleted in new
chr8	725187	725877	chr8:725187-725877	3	-	725187	725187	8553170	2	215,101,	0,589,
#Partially deleted in new
chr8	737595	1701406	chr8:737595-1701406	3	+	737807	1701406	789624	15	230,55,33,66,1058,212,148,220,350,42,86,416,92,153,219,	0,170316,521255,763770,811030,828087,889144,895231,930733,932147,938937,940618,953939,959551,963592,
#Partially deleted in new
chr8	737650	1137777	chr8:737650-1137777	0	+	737650	737650	789624	4	175,102,55,479,	0,84441,170261,399648,
#Partially deleted in new
chr8	737663	754258	chr8:737663-754258	0	+	737663	737663	8553170	2	162,803,	0,15792,
#Partially deleted in new
chr8	737741	910575	chr8:737741-910575	0	+	737741	737741	8553170	4	84,102,55,190,	0,84350,170170,172644,
#Deleted in new
chr8	738547	740374	chr8:738547-740374	3	+	738547	738547	789624	1	1827,	0,
#Partially deleted in new
chr8	822178	1701406	chr8:822178-1701406	1	+	822178	1701406	789624	15	15,55,33,66,1058,212,148,220,350,42,86,416,92,153,219,	0,85733,436672,679187,726447,743504,804561,810648,846150,847564,854354,856035,869356,874968,879009,
#Partially deleted in new
chr8	883197	1032931	chr8:883197-1032931	0	+	883197	883197	8553170	4	151,55,1192,346,	0,24714,118915,149388,
#Partially deleted in new
chr8	883327	1105066	chr8:883327-1105066	0	+	883327	883327	8553170	3	21,55,184,	0,24584,221555,
#Deleted in new
chr8	891250	893112	chr8:891250-893112	3	-	891250	891250	8553170	2	378,92,	0,1770,
#Deleted in new
chr8	1018756	1019704	chr8:1018756-1019704	3	+	1018756	1018756	8553170	1	948,	0,
#Partially deleted in new
chr8	1104881	1262580	chr8:1104881-1262580	0	+	1104881	1104881	8553170	3	185,33,163,	0,153969,157536,
#Deleted in new
chr8	1246788	1248760	chr8:1246788-1248760	3	-	1246788	1246788	8553170	3	70,98,278,	0,217,1694,
#Partially deleted in new
chr8	1250372	1262580	chr8:1250372-1262580	0	+	1250372	1250372	8553170	4	200,33,140,166,	0,8478,9296,12042,
#Deleted in new
chr8	1259578	1262580	chr8:1259578-1262580	0	+	1259578	1259578	8553170	2	230,166,	0,2836,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	1296033	1302607	chr8:1296033-1302607	3	-	1296033	1296033	789624	3	170,196,2683,	0,999,3891,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	1368641	1369833	chr8:1368641-1369833	3	-	1368641	1368641	8553170	1	1192,	0,
#Partially deleted in new
chr8	1373684	1381394	chr8:1373684-1381394	3	+	1373684	1373684	8553170	2	108,329,	0,7381,
#Deleted in new
chr8	1377866	1380307	chr8:1377866-1380307	3	+	1377866	1377866	8553170	3	233,112,135,	0,1732,2306,
#Partially deleted in new
chr8	1501365	1708474	chr8:1501365-1708474	1	+	1548693	1701406	789624	11	66,1058,212,148,220,350,86,416,92,153,7287,	0,47260,64317,125374,131461,166963,175167,176848,190169,195781,199822,
#Partially deleted in new
chr8	1548643	1701985	chr8:1548643-1701985	0	+	1548643	1701406	789624	10	1040,212,148,220,350,86,416,92,153,798,	0,17039,78096,84183,119685,127889,129570,142891,148503,152544,
#Partially deleted in new
chr8	1565508	1620535	chr8:1565508-1620535	0	-	1565508	1565508	789624	3	230,195,162,	0,54190,54865,
#Partially deleted in new
chr8	1604551	1622417	chr8:1604551-1622417	3	-	1604551	1604551	8553170	4	193,195,140,1282,	0,15147,15822,16584,
#Deleted in new
chr8	1676536	1678763	chr8:1676536-1678763	0	+	1676536	1678661	789624	2	82,550,	0,1677,
#Partially deleted in new
chr8	1678299	1688429	chr8:1678299-1688429	0	+	1678299	1678299	8553170	4	330,63,139,177,	0,682,2248,9953,
#Partially deleted in new
chr8	1678370	1680840	chr8:1678370-1680840	0	+	1678370	1680702	789624	3	259,63,293,	0,611,2177,
#Deleted in new
chr8	1726272	1726557	chr8:1726272-1726557	7	+	1726272	1726272	16724991	1	285,	0,
#Partially deleted in new
chr8	1730205	1731452	chr8:1730205-1731452	7	+	1730205	1730205	16724991	2	664,263,	0,984,
#Partially deleted in new
chr8	1755777	1771461	chr8:1755777-1771461	0	+	1771054	1771461	789624	2	305,530,	0,15154,
#Partially deleted in new
chr8	1755780	1759501	chr8:1755780-1759501	0	+	1755780	1755780	8553170	2	302,205,	0,3516,
#Partially deleted in new
chr8	1755787	1759511	chr8:1755787-1759511	0	+	1755787	1755787	8553170	3	295,58,215,	0,2461,3509,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	1758207	1760447	chr8:1758207-1760447	3	-	1758207	1758207	8553170	1	2240,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	1761989	1764339	chr8:1761989-1764339	3	-	1761989	1761989	8553170	2	939,39,	0,2311,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	1762080	1764502	chr8:1762080-1764502	0	-	1762080	1762080	789624	2	848,69,	0,2353,
#Deleted in new
chr8	1762624	1763297	chr8:1762624-1763297	0	-	1762624	1762624	8553170	2	304,275,	0,398,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	1763703	1786570	chr8:1763703-1786570	3	+	1771054	1780567	789624	3	182,666,6321,	0,7228,16546,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	1763759	1781300	chr8:1763759-1781300	1	+	1771054	1780567	789624	3	52,666,1051,	0,7172,16490,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	1763776	1781225	chr8:1763776-1781225	1	+	1771054	1780567	789624	3	165,666,976,	0,7155,16473,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	1763799	1801711	chr8:1763799-1801711	1	+	1771054	1800781	789624	3	86,666,1038,	0,7132,36874,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	1763799	1781354	chr8:1763799-1781354	1	+	1771054	1780567	789624	3	126,666,1105,	0,7132,16450,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	1763814	1782681	chr8:1763814-1782681	0	+	1771054	1780567	789624	4	71,666,895,326,	0,7117,16435,18541,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	1763814	1781357	chr8:1763814-1781357	1	+	1771054	1780567	789624	4	71,156,666,1108,	0,1253,7117,16435,
#Partially deleted in new
chr8	1763831	1780772	chr8:1763831-1780772	1	+	1771054	1780295	789624	4	54,666,62,523,	0,7100,9092,16418,
#Partially deleted in new
chr8	1763887	1958627	chr8:1763887-1958627	3	+	1771054	1857971	789624	30	54,666,84,156,288,67,77,57,164,117,115,107,78,180,117,93,171,146,176,116,128,101,122,87,224,158,143,175,123,1879,	0,7044,79465,94072,96009,100482,102638,105306,112683,116160,118747,121713,129681,130505,132445,134545,139393,141683,145407,159076,159580,159886,161395,162489,164539,165398,169912,181593,188817,192861,
#Partially deleted in new
chr8	1764651	1771286	chr8:1764651-1771286	0	+	1771054	1771286	789624	2	51,355,	0,6280,
#Partially deleted in new
chr8	1771101	1958544	chr8:1771101-1958544	0	+	1771101	1857971	789624	28	496,156,288,67,77,123,164,117,115,107,78,180,117,93,171,146,176,116,128,101,122,87,224,158,143,175,123,1796,	0,86858,88795,93268,95424,98092,105469,108946,111533,114499,122467,123291,125231,127331,132179,134469,138193,151862,152366,152672,154181,155275,157325,158184,162698,174379,181603,185647,
#Partially deleted in new
chr8	1771254	1870220	chr8:1771254-1870220	0	+	1771254	1857971	789624	7	343,84,156,288,64,77,1027,	0,72098,86705,88642,93118,95271,97939,
#Partially deleted in new
chr8	1773583	1780766	chr8:1773583-1780766	0	+	1773583	1773583	8553170	2	318,517,	0,6666,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	1799994	1801711	chr8:1799994-1801711	0	+	1799994	1799994	8553170	2	31,1038,	0,679,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	1801124	1801192	chr8:1801124-1801192	3	+	1801124	1801124	5263520	1	68,	0,
#Deleted in new
chr8	1817230	1817307	chr8:1817230-1817307	3	+	1817230	1817230	5263520	1	77,	0,
#Partially deleted in new
chr8	1823975	1958633	chr8:1823975-1958633	3	+	1843399	1957263	789624	29	138,84,156,288,64,77,57,164,117,115,107,78,180,117,93,171,146,176,116,128,101,122,87,224,158,143,175,123,1885,	0,19377,33984,35921,40397,42550,45218,52595,56072,58659,61625,69593,70417,72357,74457,79305,81595,85319,98988,99492,99798,101307,102401,104451,105310,109824,121505,128729,132773,
#Partially deleted in new
chr8	1823987	1958641	chr8:1823987-1958641	1	+	1843399	1957263	789624	28	126,84,156,288,67,77,57,164,115,107,78,180,117,93,171,146,176,116,128,101,122,87,224,158,143,175,123,1893,	0,19365,33972,35909,40382,42538,45206,52583,58647,61613,69581,70405,72345,74445,79293,81583,85307,98976,99480,99786,101295,102389,104439,105298,109812,121493,128717,132761,
#Partially deleted in new
chr8	1824014	1958641	chr8:1824014-1958641	1	+	1826110	1957263	789624	30	99,89,84,156,288,67,77,57,164,117,115,107,78,180,117,90,171,146,176,116,128,101,122,87,224,158,143,175,123,1893,	0,2032,19338,33945,35882,40355,42511,45179,52556,56033,58620,61586,69554,70378,72318,74421,79266,81556,85280,98949,99453,99759,101268,102362,104412,105271,109785,121466,128690,132734,
#Partially deleted in new
chr8	1826110	1958633	chr8:1826110-1958633	1	+	1826110	1957263	789624	29	25,84,156,288,67,77,57,164,117,115,107,78,180,117,93,171,146,176,116,128,101,122,87,224,158,143,175,123,1885,	0,17242,31849,33786,38259,40415,43083,50460,53937,56524,59490,67458,68282,70222,72322,77170,79460,83184,96853,97357,97663,99172,100266,102316,103175,107689,119370,126594,130638,
#Partially deleted in new
chr8	1858754	1869280	chr8:1858754-1869280	0	+	1858754	1858754	8553170	5	62,288,67,77,87,	0,1142,5615,7771,10439,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr8	1858754	1904096	chr8:1858754-1904096	1	+	1866595	1903505	789624	13	62,288,67,77,57,164,115,107,78,180,117,93,816,	0,1142,5615,7771,10439,17816,23880,26846,34814,35638,37578,39678,44526,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	1859893	1904110	chr8:1859893-1904110	0	+	1859893	1859893	8553170	12	291,67,77,57,164,115,107,78,180,117,93,830,	0,4476,6632,9300,16677,22741,25707,33675,34499,36439,38539,43387,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	1859914	1871131	chr8:1859914-1871131	0	+	1859914	1859914	8553170	4	270,64,77,1938,	0,4458,6611,9279,
#Partially deleted in new
chr8	1876050	1927513	chr8:1876050-1927513	0	+	1876050	1876050	8553170	15	684,115,107,78,180,117,93,171,146,176,116,128,101,119,1137,	0,6584,9550,17518,18342,20282,22382,27230,29520,33244,46913,47417,47723,49235,50326,
#Partially deleted in new
chr8	1882655	1958639	chr8:1882655-1958639	0	+	1882655	1957263	789624	19	94,107,78,180,117,93,171,146,176,116,128,101,122,224,158,143,175,123,1891,	0,2945,10913,11737,13677,15777,20625,22915,26639,40308,40812,41118,42627,45771,46630,51144,62825,70049,74093,
#Partially deleted in new
chr8	1904234	1923490	chr8:1904234-1923490	0	+	1904234	1904234	8553170	5	77,146,176,116,23,	0,1336,5060,18729,19233,
#Deleted in new
chr8	1923195	1923874	chr8:1923195-1923874	0	+	1923195	1923195	8553170	2	400,101,	0,578,
#Partially deleted in new
chr8	1943593	1952774	chr8:1943593-1952774	0	+	1943593	1943593	8553170	3	314,175,70,	0,1887,9111,
#Deleted in new
chr8	1943594	1945919	chr8:1943594-1945919	0	+	1943594	1943594	8553170	2	118,439,	0,1886,
#Partially deleted in new
chr8	1943653	1957205	chr8:1943653-1957205	0	+	1943653	1943653	8553170	4	59,175,123,457,	0,1827,9051,13095,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	1957920	1963131	chr8:1957920-1963131	3	-	1957920	1957920	8553170	2	2656,326,	0,4885,
#Partially deleted in new
chr8	1971396	1976478	chr8:1971396-1976478	3	+	1971396	1971396	789624	3	122,113,580,	0,528,4502,
#Deleted in new
chr8	1972820	1974637	chr8:1972820-1974637	1	-	1972820	1972820	8553170	3	216,198,31,	0,327,1786,
#Partially deleted in new
chr8	1973877	2006936	chr8:1973877-2006936	3	+	2001192	2003064	789624	2	58,6652,	0,26407,
#Deleted in new
chr8	1974817	1975314	chr8:1974817-1975314	3	+	1974817	1974817	8553170	1	497,	0,
#Deleted in new
chr8	2033507	2035587	chr8:2033507-2035587	3	+	2033507	2033507	8553170	2	291,121,	0,1959,
#Partially deleted in new
chr8	2045039	2145456	chr8:2045039-2145456	3	+	2050766	2144981	789624	37	129,119,156,139,158,93,89,51,165,162,142,200,54,128,184,175,122,188,127,179,115,157,107,45,137,145,60,68,114,88,39,106,164,37,23,56,793,	0,5715,7118,12308,12583,14113,24238,24407,27305,28299,31101,33694,34520,40223,44968,47306,48930,51207,53817,55836,57627,61202,61451,63746,64355,70920,71176,72845,78212,78515,79139,84087,95683,96101,97335,98361,99624,
#Partially deleted in new
chr8	2045068	2145455	chr8:2045068-2145455	1	+	2090088	2144981	789624	24	100,184,175,122,188,127,179,115,157,107,45,137,145,60,68,114,88,39,106,164,37,23,56,792,	0,44939,47277,48901,51178,53788,55807,57598,61173,61422,63717,64326,70891,71147,72816,78183,78486,79110,84058,95654,96072,97306,98332,99595,
#Deleted in new
chr8	2076588	2076640	chr8:2076588-2076640	3	+	2076588	2076588	5263520	1	52,	0,
#Partially deleted in new
chr8	2081787	2090064	chr8:2081787-2090064	0	+	2081787	2081787	8553170	3	395,128,57,	0,3475,8220,
#Partially deleted in new
chr8	2084999	2094025	chr8:2084999-2094025	0	+	2084999	2084999	8553170	5	22,128,184,175,56,	0,263,5008,7346,8970,
#Partially deleted in new
chr8	2098044	2106298	chr8:2098044-2106298	0	+	2098044	2098044	8553170	5	67,127,179,115,57,	0,812,2831,4622,8197,
#Partially deleted in new
chr8	2100443	2106551	chr8:2100443-2106551	0	+	2100443	2100443	8553170	5	56,179,115,157,61,	0,432,2223,5798,6047,
#Partially deleted in new
chr8	2102002	2106516	chr8:2102002-2106516	0	+	2102002	2102002	8553170	4	260,115,157,26,	0,664,4239,4488,
#Partially deleted in new
chr8	2109286	2129175	chr8:2109286-2129175	0	+	2109286	2109286	8553170	8	245,145,60,68,114,88,39,49,	0,6673,6929,8598,13965,14268,14892,19840,
#Partially deleted in new
chr8	2118864	2140818	chr8:2118864-2140818	0	+	2118864	2118864	8553170	6	347,114,88,39,106,96,	0,4387,4690,5314,10262,21858,
#Partially deleted in new
chr8	2119257	2140826	chr8:2119257-2140826	0	+	2119257	2119257	8553170	6	194,114,88,39,106,104,	0,3994,4297,4921,9869,21465,
#Partially deleted in new
chr8	2127734	2144910	chr8:2127734-2144910	0	+	2127734	2127734	8553170	7	147,106,164,37,23,56,247,	0,1392,12988,13406,14640,15666,16929,
#Partially deleted in new
chr8	2127796	2144843	chr8:2127796-2144843	0	+	2127796	2127796	8553170	6	85,106,164,23,56,180,	0,1330,12926,14578,15604,16867,
#Partially deleted in new
chr8	2140742	2145438	chr8:2140742-2145438	0	+	2140742	2140742	8553170	3	144,56,775,	0,2658,3921,
#Partially deleted in new
chr8	2140848	2165552	chr8:2140848-2165552	0	+	2140848	2140848	8553170	5	38,37,23,56,400,	0,292,1526,2552,24304,
#Deleted in new
chr8	2143348	2144766	chr8:2143348-2144766	0	+	2143348	2143348	8553170	2	108,103,	0,1315,
#Partially deleted in new
chr8	2493875	2512580	chr8:2493875-2512580	3	-	2493875	2493875	8553170	3	216,148,148,	0,17049,18557,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	2495521	2499428	chr8:2495521-2499428	3	+	2495521	2495521	8553170	3	107,114,254,	0,937,3653,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	2517897	2529710	chr8:2517897-2529710	3	-	2517897	2517897	8553170	3	52,334,89,	0,10772,11724,
#Deleted in new
chr8	2518997	2522182	chr8:2518997-2522182	3	+	2518997	2518997	8553170	3	226,91,242,	0,646,2943,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	2589984	2623382	chr8:2589984-2623382	3	-	2589984	2589984	8553170	5	1265,136,80,150,88,	0,5580,6640,14796,33310,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	2589984	2623365	chr8:2589984-2623365	0	-	2589984	2589984	789624	5	1265,139,80,150,71,	0,5580,6640,14796,33310,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	2727317	2822482	chr8:2727317-2822482	3	+	2727317	2727317	8553170	5	176,124,68,153,89,	0,77268,81049,91949,95076,
#Partially deleted in new
chr8	2935352	3409607	chr8:2935352-3409607	0	-	2938584	3409607	789624	56	3392,133,88,113,162,180,112,74,174,174,180,177,183,174,189,174,174,174,195,186,189,147,114,81,146,178,189,210,117,70,119,105,97,125,204,96,114,117,195,188,139,192,203,127,192,157,170,189,216,117,189,188,139,195,327,185,	0,7119,13946,14878,15761,20236,22343,25788,27113,27869,30422,31217,37764,39098,43259,62658,64605,83124,93966,117109,151744,156163,171175,172365,173250,174805,183046,207112,216044,222544,226806,245757,252516,253534,254559,264361,266259,270151,279144,283902,288376,294687,348791,372342,372959,407941,412639,423799,431679,433901,452141,460841,464038,470674,472546,474070,
#Partially deleted in new
chr8	2935353	4032100	chr8:2935353-4032100	1	-	2938584	4032100	789624	68	3391,133,88,113,162,45,180,112,74,174,174,180,177,183,174,189,174,174,174,195,186,189,147,189,114,81,146,178,189,210,117,70,119,105,97,125,204,96,114,117,195,188,139,192,203,127,192,157,170,189,216,117,189,188,139,195,327,183,113,104,122,125,88,78,109,4,208,196,	0,7118,13945,14877,15760,18870,20235,22342,25787,27112,27868,30421,31216,37763,39097,43258,62657,64604,83123,93965,117108,151743,156162,161495,171174,172364,173249,174804,183045,207111,216043,222543,226805,245756,252515,253533,254558,264360,266258,270150,279143,283901,288375,294686,348790,372341,372958,407940,412638,423798,431678,433900,452140,460840,464037,470673,472545,474069,533358,558269,639591,650782,681356,773060,818576,1014602,1062549,1096551,
#Partially deleted in new
chr8	2938098	4994701	chr8:2938098-4994701	1	-	2938584	4994416	789624	68	646,133,88,113,162,45,180,112,74,174,174,183,174,189,174,174,195,186,189,147,189,114,81,146,178,189,210,117,70,119,105,97,125,204,96,114,117,195,188,139,192,203,127,192,157,170,189,216,117,189,188,139,195,327,183,113,104,122,125,3,88,78,113,208,195,113,217,370,	0,4373,11200,12132,13015,16125,17490,19597,23042,24367,25123,35018,36352,40513,59912,61859,91220,114363,148998,153417,158750,168429,169619,170504,172059,180300,204366,213298,219798,224060,243011,249770,250788,251813,261615,263513,267405,276398,281156,285630,291941,346045,369596,370213,405195,409893,421053,428933,431155,449395,458095,461292,467928,469800,471324,530613,555524,636846,648037,675177,678611,770315,815831,1059804,1093806,1481854,1699243,2056233,
#Partially deleted in new
chr8	2938098	4994972	chr8:2938098-4994972	1	-	2938584	4994416	789624	71	646,133,88,113,162,45,180,112,74,174,174,180,177,183,174,189,174,174,174,195,186,189,147,189,114,81,146,178,189,210,117,70,119,105,97,125,204,96,114,117,195,188,139,192,203,127,192,157,170,189,216,117,189,188,139,195,327,183,113,104,122,125,3,88,78,113,208,195,113,217,641,	0,4373,11200,12132,13015,16125,17490,19597,23042,24367,25123,27676,28471,35018,36352,40513,59912,61859,80378,91220,114363,148998,153417,158750,168429,169619,170504,172059,180300,204366,213298,219798,224060,243011,249770,250788,251813,261615,263513,267405,276398,281156,285630,291941,346045,369596,370213,405195,409893,421053,428933,431155,449395,458095,461292,467928,469800,471324,530613,555524,636846,648037,675177,678611,770315,815831,1059804,1093806,1481854,1699243,2056233,
#Partially deleted in new
chr8	2938098	4994972	chr8:2938098-4994972	1	-	2938584	4994416	789624	71	646,133,88,113,162,45,180,112,74,174,174,180,177,183,174,189,174,174,174,195,186,189,147,189,114,81,146,178,189,210,117,70,119,105,97,125,204,96,114,117,195,188,139,192,203,127,192,157,170,189,216,117,189,188,139,195,327,183,113,104,122,125,3,88,78,113,208,195,113,217,641,	0,4373,11200,12132,13015,16125,17490,19597,23042,24367,25123,27676,28471,35018,36352,40513,59912,61859,80378,91220,114363,148998,153417,158750,168429,169619,170504,172059,180300,204366,213298,219798,224060,243011,249770,250788,251813,261615,263513,267405,276398,281156,285630,291941,346045,369596,370213,405195,409893,421053,428933,431155,449395,458095,461292,467928,469800,471324,530613,555524,636846,648037,660205,678611,770315,815831,1059804,1093806,1481854,1699243,2056233,
#Partially deleted in new
chr8	2938098	4994701	chr8:2938098-4994701	1	-	2938584	4994416	789624	68	646,133,88,113,162,45,180,112,74,174,174,183,174,189,174,174,195,186,189,147,189,114,81,146,178,189,210,117,70,119,105,97,125,204,96,114,117,195,188,139,192,203,127,192,157,170,189,216,117,189,188,139,195,327,183,113,104,122,125,3,88,78,113,208,195,113,217,370,	0,4373,11200,12132,13015,16125,17490,19597,23042,24367,25123,35018,36352,40513,59912,61859,91220,114363,148998,153417,158750,168429,169619,170504,172059,180300,204366,213298,219798,224060,243011,249770,250788,251813,261615,263513,267405,276398,281156,285630,291941,346045,369596,370213,405195,409893,421053,428933,431155,449395,458095,461292,467928,469800,471324,530613,555524,636846,648037,660205,678611,770315,815831,1059804,1093806,1481854,1699243,2056233,
#Partially deleted in new
chr8	2938098	4994972	chr8:2938098-4994972	3	-	2938584	4994416	0	70	646,133,88,113,162,45,180,112,74,174,174,180,177,183,174,189,174,174,174,195,186,189,147,189,114,81,146,178,189,210,117,70,119,105,97,125,204,96,114,117,195,188,139,192,203,127,192,157,170,189,216,117,189,188,139,195,327,183,113,104,122,125,88,78,113,208,195,113,217,641,	0,4373,11200,12132,13015,16125,17490,19597,23042,24367,25123,27676,28471,35018,36352,40513,59912,61859,80378,91220,114363,148998,153417,158750,168429,169619,170504,172059,180300,204366,213298,219798,224060,243011,249770,250788,251813,261615,263513,267405,276398,281156,285630,291941,346045,369596,370213,405195,409893,421053,428933,431155,449395,458095,461292,467928,469800,471324,530613,555524,636846,648037,678611,770315,815831,1059804,1093806,1481854,1699243,2056233,
#Partially deleted in new
chr8	2999978	3043788	chr8:2999978-3043788	0	-	2999978	2999978	8553170	4	153,174,195,68,	0,18498,29340,43742,
#Partially deleted in new
chr8	3096901	3107155	chr8:3096901-3107155	0	-	3096901	3096901	8553170	2	136,628,	0,9626,
#Partially deleted in new
chr8	3110212	3113363	chr8:3110212-3113363	0	-	3110212	3110212	8553170	2	123,404,	0,2747,
#Partially deleted in new
chr8	3127385	3284654	chr8:3127385-3284654	0	-	3127385	3127385	8553170	18	1515,210,117,70,119,105,97,125,204,96,114,117,195,188,139,192,203,183,	0,15079,24011,30511,34773,53724,60483,61501,62526,72328,74226,78118,87111,91869,96343,102654,156758,157086,
#Partially deleted in new
chr8	3151246	3396319	chr8:3151246-3396319	0	-	3151246	3151246	8553170	24	267,70,119,105,97,125,204,96,114,117,195,188,139,192,203,127,192,157,170,189,216,117,189,126,	0,6650,10912,29863,36622,37640,38665,48467,50365,54257,63250,68008,72482,78793,132897,156448,157065,192047,196745,207905,215785,218007,236247,244947,
#Partially deleted in new
chr8	3151431	3183146	chr8:3151431-3183146	0	-	3151431	3151431	8553170	5	82,70,119,105,156,	0,6465,10727,29678,31559,
#Partially deleted in new
chr8	3278363	3284346	chr8:3278363-3284346	0	-	3278363	3278363	8553170	2	800,203,	0,5780,
#Partially deleted in new
chr8	3373352	3375226	chr8:3373352-3375226	3	-	3373352	3373352	8553170	2	376,87,	0,1787,
#Partially deleted in new
chr8	3468711	3515359	chr8:3468711-3515359	0	-	3468711	3468711	8553170	3	113,104,95,	0,24911,46553,
#Deleted in new
chr8	3468711	3469200	chr8:3468711-3469200	0	-	3468711	3468711	8553170	2	113,68,	0,421,
#Partially deleted in new
chr8	3586164	3616739	chr8:3586164-3616739	0	-	3586164	3586164	8553170	2	96,30,	0,30545,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	3700491	3700628	chr8:3700491-3700628	7	+	3700491	3700491	16724991	1	137,	0,
#Partially deleted in new
chr8	3702146	3708496	chr8:3702146-3708496	0	-	3702146	3702146	8553170	3	134,117,83,	0,2594,6267,
#Deleted in new
chr8	4787331	4788584	chr8:4787331-4788584	7	+	4787331	4787331	16724991	1	1253,	0,
#Deleted in new
chr8	5072644	5072869	chr8:5072644-5072869	7	-	5072644	5072644	16724991	1	225,	0,
#Partially deleted in new
chr8	5127918	5128233	chr8:5127918-5128233	7	-	5127918	5127918	16724991	1	315,	0,
#Partially deleted in new
chr8	5128278	5128412	chr8:5128278-5128412	3	-	5128278	5128278	8553170	1	134,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	5142410	5142707	chr8:5142410-5142707	3	-	5142410	5142410	8553170	1	297,	0,
#Deleted in new
chr8	5363370	5363650	chr8:5363370-5363650	7	+	5363370	5363370	16724991	1	280,	0,
#Deleted in new
chr8	5455217	5455665	chr8:5455217-5455665	7	-	5455217	5455217	16724991	1	448,	0,
#Partially deleted in new
chr8	5476547	5476966	chr8:5476547-5476966	7	+	5476547	5476547	16724991	1	419,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	5506067	5509126	chr8:5506067-5509126	3	-	5506067	5506067	8553170	1	3059,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	5659678	5670077	chr8:5659678-5670077	3	-	5659678	5659678	8553170	3	308,486,129,	0,5025,10270,
#Partially deleted in new
chr8	5716583	5716804	chr8:5716583-5716804	7	+	5716583	5716583	16724991	1	221,	0,
#Partially deleted in new
chr8	5848696	5849692	chr8:5848696-5849692	7	+	5848696	5848696	16724991	1	996,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	5910944	5911236	chr8:5910944-5911236	3	-	5910944	5910944	8553170	1	292,	0,
#Deleted in new
chr8	6036432	6036974	chr8:6036432-6036974	3	-	6036432	6036432	8553170	3	36,170,125,	0,168,417,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	6403550	6406548	chr8:6403550-6406548	3	-	6403550	6403550	789624	2	1570,843,	0,2155,
#Deleted in new
chr8	6405405	6406542	chr8:6405405-6406542	0	-	6405405	6405405	8553170	1	1137,	0,
#Deleted in new
chr8	6405596	6407142	chr8:6405596-6407142	1	-	6405596	6405596	8553170	3	775,181,61,	0,931,1485,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr8	6406591	6648504	chr8:6406591-6648504	3	+	6406667	6643049	0	14	98,92,119,88,115,144,90,1155,110,38,163,78,238,5511,	0,2687,8173,24907,29456,32361,35475,37801,48551,71002,74122,93260,214862,236402,
#Partially deleted in new
chr8	6406595	6446567	chr8:6406595-6446567	1	+	6406667	6445555	0	8	94,92,119,88,115,144,90,2175,	0,2683,8169,24903,29452,32357,35471,37797,
#Partially deleted in new
chr8	6406642	6445890	chr8:6406642-6445890	1	+	6406667	6445555	0	7	47,92,119,88,115,90,1498,	0,2636,8122,24856,29405,35424,37750,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	6455201	6494542	chr8:6455201-6494542	0	+	6455201	6455201	8553170	2	51,419,	0,38922,
#Partially deleted in new
chr8	6473844	6474288	chr8:6473844-6474288	7	-	6473844	6473844	16724991	1	444,	0,
#Partially deleted in new
chr8	6477265	6621671	chr8:6477265-6621671	0	+	6477265	6477265	8553170	5	42,38,163,78,218,	0,328,3448,22586,144188,
#Partially deleted in new
chr8	6477358	6621621	chr8:6477358-6621621	0	+	6477358	6477358	8553170	5	93,38,163,78,168,	0,235,3355,22493,144095,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	6499650	6563409	chr8:6499650-6563409	3	-	6503100	6562934	0	9	3611,131,167,102,131,233,122,156,763,	0,9281,14027,15026,20213,21527,27904,32681,62996,
#Partially deleted in new
chr8	6502297	6563245	chr8:6502297-6563245	1	-	6503100	6562934	0	9	964,131,167,102,128,233,122,156,599,	0,6634,11380,12379,17566,18880,25257,30034,60349,
#Partially deleted in new
chr8	6503079	6563044	chr8:6503079-6563044	1	-	6503100	6562934	0	8	182,131,167,102,131,233,122,398,	0,5852,10598,11597,16784,18098,24475,59567,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	6507572	6563245	chr8:6507572-6563245	1	-	6508878	6562934	789624	8	1490,167,102,128,233,122,156,599,	0,6105,7104,12291,13605,19982,24759,55074,
#Deleted in new
chr8	6615603	6617198	chr8:6615603-6617198	3	-	6615603	6615603	8553170	1	1595,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	6618474	6648807	chr8:6618474-6648807	1	-	6618474	6618474	8553170	5	728,90,644,160,525,	0,1660,2517,8676,29808,
#Partially deleted in new
chr8	6620134	6708200	chr8:6620134-6708200	0	-	6620134	6620134	789624	4	90,213,160,60,	0,1288,7016,88006,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	6621451	6643370	chr8:6621451-6643370	0	+	6621451	6621451	8553170	3	240,160,377,	0,21228,21542,
#Deleted in new
chr8	6622123	6622220	chr8:6622123-6622220	3	-	6622123	6622123	5263520	1	97,	0,
#Partially deleted in new
chr8	6708356	6759666	chr8:6708356-6759666	3	+	6708668	6757388	789624	8	531,70,116,90,91,159,124,2504,	0,16513,22354,24204,33304,39313,46694,48806,
#Partially deleted in new
chr8	6708665	6758885	chr8:6708665-6758885	0	+	6708668	6730758	789624	7	222,116,90,91,159,124,1723,	0,22045,23895,32995,39004,46385,48497,
#Partially deleted in new
chr8	6708692	6757695	chr8:6708692-6757695	0	+	6708692	6757388	789624	3	195,124,533,	0,46358,48470,
#Partially deleted in new
chr8	6708859	6730743	chr8:6708859-6730743	0	+	6708859	6709073	789624	4	303,62,70,33,	0,621,16010,21851,
#Deleted in new
chr8	6745163	6745244	chr8:6745163-6745244	3	+	6745163	6745163	5263520	1	81,	0,
#Deleted in new
chr8	6745167	6745240	chr8:6745167-6745240	3	-	6745167	6745167	5263520	1	73,	0,
#Deleted in new
chr8	6745754	6747742	chr8:6745754-6747742	0	+	6745754	6745754	8553170	2	487,73,	0,1915,
#Partially deleted in new
chr8	6747683	6757505	chr8:6747683-6757505	0	+	6747683	6747683	8553170	2	145,343,	0,9479,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	6808516	6835644	chr8:6808516-6835644	3	-	6811197	6835493	789624	7	3823,112,170,210,185,184,209,	0,7290,13352,15004,16648,24200,26919,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	6808516	6835498	chr8:6808516-6835498	0	-	6829287	6835493	789624	8	3823,112,170,210,185,138,184,63,	0,7290,13352,15004,16648,20652,24200,26919,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	6835553	6842457	chr8:6835553-6842457	1	+	6835553	6835553	789624	3	64,256,790,	0,412,6114,
#Partially deleted in new
chr8	6841910	6885276	chr8:6841910-6885276	3	+	6841910	6841910	8553170	3	57,168,155,	0,2851,43211,
#Partially deleted in new
chr8	6870574	6878022	chr8:6870574-6878022	3	-	6870680	6877857	0	2	252,226,	0,7222,
#Partially deleted in new
chr8	6898877	6899468	chr8:6898877-6899468	7	-	6898877	6898877	16724991	1	591,	0,
#Partially deleted in new
chr8	6924692	6926076	chr8:6924692-6926076	3	-	6924817	6926035	0	2	235,234,	0,1150,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	6928607	6930473	chr8:6928607-6930473	3	+	6928607	6928607	8553170	3	143,124,134,	0,730,1732,
#Deleted in new
chr8	6935821	6938338	chr8:6935821-6938338	3	-	6936019	6936899	0	3	320,184,113,	0,906,2404,
#Deleted in new
chr8	6950725	6951599	chr8:6950725-6951599	7	-	6950725	6950725	16724991	2	113,172,	0,702,
#Deleted in new
chr8	6959288	6960161	chr8:6959288-6960161	7	-	6959288	6959288	16724991	2	113,172,	0,701,
#Partially deleted in new
chr8	6968140	6969113	chr8:6968140-6969113	7	-	6968140	6968140	16724991	2	113,175,	0,798,
#Deleted in new
chr8	6977648	6978634	chr8:6977648-6978634	1	-	6977769	6978634	0	2	231,175,	0,811,
#Partially deleted in new
chr8	6977649	6980080	chr8:6977649-6980080	3	-	6977769	6978634	0	3	230,187,68,	0,810,2363,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	6987177	6989721	chr8:6987177-6989721	7	-	6987177	6987177	16724991	3	246,187,63,	0,922,2481,
#Partially deleted in new
chr8	6996765	6999195	chr8:6996765-6999195	3	-	6996886	6997751	0	3	231,187,73,	0,811,2357,
#Partially deleted in new
chr8	7006292	7007389	chr8:7006292-7007389	7	-	7006292	7006292	16724991	2	234,187,	0,910,
#Partially deleted in new
chr8	7015868	7018301	chr8:7015868-7018301	3	-	7015989	7016850	0	3	231,187,80,	0,807,2353,
#Deleted in new
chr8	7028640	7029489	chr8:7028640-7029489	7	-	7028640	7028640	16724991	2	88,173,	0,676,
#Deleted in new
chr8	7038570	7039439	chr8:7038570-7039439	7	-	7038570	7038570	16724991	2	113,172,	0,697,
#Deleted in new
chr8	7055303	7056734	chr8:7055303-7056734	3	-	7055430	7056697	0	2	240,209,	0,1222,
#Partially deleted in new
chr8	7082970	7083328	chr8:7082970-7083328	7	+	7082970	7082970	16724991	1	358,	0,
#Partially deleted in new
chr8	7092101	7092320	chr8:7092101-7092320	5	+	7092101	7092101	16724991	1	219,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	7092274	7187250	chr8:7092274-7187250	4	+	7092274	7092274	16724991	4	46,89,49,967,	0,60443,62467,94009,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	7109248	7187299	chr8:7109248-7187299	6	+	7109248	7109248	16724991	6	368,163,119,89,49,1016,	0,3107,10033,43469,45493,77035,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	7109286	7187316	chr8:7109286-7187316	5	+	7109286	7109286	16724991	5	330,163,119,89,1033,	0,3069,9995,43431,76997,
#Partially deleted in new
chr8	7112313	7113728	chr8:7112313-7113728	7	-	7112313	7112313	16724991	3	36,45,102,	0,563,1313,
#Partially deleted in new
chr8	7122856	7123704	chr8:7122856-7123704	7	+	7122856	7122856	16724991	1	848,	0,
#Partially deleted in new
chr8	7143631	7143841	chr8:7143631-7143841	7	-	7143631	7143631	16724991	1	210,	0,
#Partially deleted in new
chr8	7170549	7170741	chr8:7170549-7170741	7	+	7170549	7170549	16724991	1	192,	0,
#Partially deleted in new
chr8	7190900	7191563	chr8:7190900-7191563	7	-	7190900	7190900	16724991	1	663,	0,
#Deleted in new
chr8	7200755	7200857	chr8:7200755-7200857	7	+	7200755	7200755	16724991	1	102,	0,
#Deleted in new
chr8	7221712	7221930	chr8:7221712-7221930	7	-	7221712	7221712	16724991	1	218,	0,
#Deleted in new
chr8	7227852	7228073	chr8:7227852-7228073	7	-	7227852	7227852	16724991	1	221,	0,
#Deleted in new
chr8	7238285	7238631	chr8:7238285-7238631	7	-	7238285	7238285	16724991	1	346,	0,
#Deleted in new
chr8	7246725	7247571	chr8:7246725-7247571	7	-	7246725	7246725	16724991	1	846,	0,
#Partially deleted in new
chr8	7256903	7259914	chr8:7256903-7259914	7	+	7256903	7256903	16724991	4	123,200,109,963,	0,617,1275,2048,
#Partially deleted in new
chr8	7264525	7267536	chr8:7264525-7267536	7	+	7264525	7264525	16724991	4	123,200,109,963,	0,617,1275,2048,
#Partially deleted in new
chr8	7272147	7275158	chr8:7272147-7275158	7	+	7272147	7272147	16724991	4	123,200,109,963,	0,617,1275,2048,
#Partially deleted in new
chr8	7279769	7282780	chr8:7279769-7282780	7	+	7279769	7279769	16724991	4	123,200,109,963,	0,617,1275,2048,
#Partially deleted in new
chr8	7287391	7290402	chr8:7287391-7290402	7	+	7287391	7287391	16724991	4	123,200,109,963,	0,617,1275,2048,
#Deleted in new
chr8	7295013	7298024	chr8:7295013-7298024	7	+	7295013	7295013	16724991	4	123,200,109,963,	0,617,1275,2048,
#Partially deleted in new
chr8	7301610	7355354	chr8:7301610-7355354	3	-	7301610	7301610	789624	7	561,65,68,68,62,64,544,	0,22158,22686,23211,23526,47472,53200,
#Partially deleted in new
chr8	7312845	7319951	chr8:7312845-7319951	7	+	7312845	7312845	16724991	2	58,206,	0,6900,
#Partially deleted in new
chr8	7318539	7355339	chr8:7318539-7355339	1	-	7318539	7318539	8553170	6	1303,261,84,279,174,529,	0,4560,6282,6597,30433,36271,
#Deleted in new
chr8	7332386	7333979	chr8:7332386-7333979	3	+	7332386	7333979	789624	1	1593,	0,
#Deleted in new
chr8	7337114	7338707	chr8:7337114-7338707	3	+	7337114	7338707	789624	1	1593,	0,
#Deleted in new
chr8	7341825	7342942	chr8:7341825-7342942	7	+	7341825	7341825	16724991	1	1117,	0,
#Partially deleted in new
chr8	7355516	7385558	chr8:7355516-7385558	3	-	7357975	7362946	789624	7	3044,83,96,127,83,150,61,	0,4102,4720,5593,7418,25935,29981,
#Deleted in new
chr8	7373113	7377500	chr8:7373113-7377500	7	+	7373113	7373113	16724991	2	88,164,	0,4223,
#Deleted in new
chr8	7414859	7416863	chr8:7414859-7416863	3	-	7414960	7416827	0	2	238,94,	0,1910,
#Deleted in new
chr8	7418990	7420546	chr8:7418990-7420546	7	+	7418990	7418990	16724991	1	1556,	0,
#Partially deleted in new
chr8	7428887	7430348	chr8:7428887-7430348	3	-	7428983	7430130	0	2	242,276,	0,1185,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	7442683	7463452	chr8:7442683-7463452	0	-	7442874	7463452	789624	4	66,179,153,10,	0,170,20023,20759,
#Partially deleted in new
chr8	7447752	7463526	chr8:7447752-7463526	1	-	7448014	7463503	789624	4	297,78,153,84,	0,3070,14954,15690,
#Partially deleted in new
chr8	7447752	7463526	chr8:7447752-7463526	1	-	7448014	7463503	789624	3	297,153,84,	0,14954,15690,
#Partially deleted in new
chr8	7447752	7462857	chr8:7447752-7462857	0	-	7449225	7462857	789624	3	297,104,151,	0,1380,14954,
#Partially deleted in new
chr8	7450562	7463670	chr8:7450562-7463670	1	-	7450878	7463503	789624	4	338,76,153,228,	0,561,12144,12880,
#Partially deleted in new
chr8	7450563	7452365	chr8:7450563-7452365	1	-	7450712	7452313	789624	2	337,107,	0,1695,
#Partially deleted in new
chr8	7450602	7452365	chr8:7450602-7452365	1	-	7450878	7452313	789624	3	298,76,107,	0,521,1656,
#Partially deleted in new
chr8	7450610	7463654	chr8:7450610-7463654	1	-	7450712	7463503	789624	3	290,153,212,	0,12096,12832,
#Deleted in new
chr8	7461113	7463674	chr8:7461113-7463674	3	-	7461406	7463503	789624	3	421,153,232,	0,1593,2329,
#Partially deleted in new
chr8	7470307	7475082	chr8:7470307-7475082	3	-	7470355	7475068	0	2	209,72,	0,4703,
#Partially deleted in new
chr8	7482503	7486400	chr8:7482503-7486400	3	-	7482603	7486382	0	2	249,67,	0,3830,
#Deleted in new
chr8	7487668	7489593	chr8:7487668-7489593	3	+	7487720	7489551	789624	3	122,42,167,	0,467,1758,
#Partially deleted in new
chr8	7495845	7509311	chr8:7495845-7509311	3	+	7495933	7509223	789624	2	158,231,	0,13235,
#Deleted in new
chr8	7525142	7527297	chr8:7525142-7527297	7	+	7525142	7525142	16724991	4	77,62,67,632,	0,833,1138,1523,
#Deleted in new
chr8	7539627	7542450	chr8:7539627-7542450	3	+	7539804	7541880	789624	4	254,62,68,1203,	0,1017,1324,1620,
#Deleted in new
chr8	7544675	7545300	chr8:7544675-7545300	7	+	7544675	7544675	16724991	1	625,	0,
#Deleted in new
chr8	7549052	7552062	chr8:7549052-7552062	7	-	7549052	7549052	16724991	4	962,109,200,123,	0,1627,2193,2887,
#Deleted in new
chr8	7556699	7559712	chr8:7556699-7559712	3	-	7556699	7559712	789624	4	963,109,200,123,	0,1628,2195,2890,
#Deleted in new
chr8	7564349	7567360	chr8:7564349-7567360	7	-	7564349	7564349	16724991	4	963,109,201,123,	0,1628,2193,2888,
#Deleted in new
chr8	7571994	7575006	chr8:7571994-7575006	3	-	7571994	7575006	789624	4	963,109,200,123,	0,1627,2194,2889,
#Deleted in new
chr8	7579643	7582653	chr8:7579643-7582653	3	-	7579643	7582653	789624	4	963,109,200,123,	0,1627,2194,2887,
#Deleted in new
chr8	7592005	7592916	chr8:7592005-7592916	7	+	7592005	7592005	16724991	1	911,	0,
#Deleted in new
chr8	7601003	7601267	chr8:7601003-7601267	7	+	7601003	7601003	16724991	1	264,	0,
#Deleted in new
chr8	7611472	7611690	chr8:7611472-7611690	7	+	7611472	7611472	16724991	1	218,	0,
#Deleted in new
chr8	7680308	7680526	chr8:7680308-7680526	7	-	7680308	7680308	16724991	1	218,	0,
#Deleted in new
chr8	7686422	7686643	chr8:7686422-7686643	7	-	7686422	7686422	16724991	1	221,	0,
#Deleted in new
chr8	7696829	7697093	chr8:7696829-7697093	7	-	7696829	7696829	16724991	1	264,	0,
#Deleted in new
chr8	7705181	7706113	chr8:7705181-7706113	7	-	7705181	7705181	16724991	1	932,	0,
#Deleted in new
chr8	7715442	7718453	chr8:7715442-7718453	3	+	7715442	7718453	789624	4	123,200,109,963,	0,617,1275,2048,
#Deleted in new
chr8	7723090	7726101	chr8:7723090-7726101	3	+	7723090	7726101	789624	4	123,200,109,963,	0,617,1275,2048,
#Deleted in new
chr8	7730738	7733749	chr8:7730738-7733749	3	+	7730738	7733749	789624	4	123,200,109,963,	0,617,1275,2048,
#Deleted in new
chr8	7738386	7741396	chr8:7738386-7741396	3	+	7738386	7741396	789624	4	123,200,109,963,	0,617,1274,2047,
#Deleted in new
chr8	7746033	7749044	chr8:7746033-7749044	3	+	7746033	7749044	789624	4	123,200,109,963,	0,617,1275,2048,
#Deleted in new
chr8	7753681	7756692	chr8:7753681-7756692	3	+	7753681	7756692	789624	4	123,200,109,963,	0,617,1275,2048,
#Deleted in new
chr8	7761329	7764340	chr8:7761329-7764340	3	+	7761329	7764340	789624	4	123,200,109,963,	0,617,1275,2048,
#Deleted in new
chr8	7768976	7771988	chr8:7768976-7771988	3	+	7768976	7771988	789624	4	123,200,109,963,	0,617,1275,2049,
#Deleted in new
chr8	7775740	7776365	chr8:7775740-7776365	7	-	7775740	7775740	16724991	1	625,	0,
#Deleted in new
chr8	7778590	7781413	chr8:7778590-7781413	3	-	7779160	7781236	789624	4	1203,68,62,254,	0,1431,1744,2569,
#Deleted in new
chr8	7793715	7795870	chr8:7793715-7795870	7	-	7793715	7793715	16724991	4	629,67,62,77,	0,950,1260,2078,
#Partially deleted in new
chr8	7811719	7815716	chr8:7811719-7815716	3	-	7811807	7815628	789624	2	231,158,	0,3839,
#Deleted in new
chr8	7821965	7823889	chr8:7821965-7823889	3	-	7822007	7823838	789624	3	167,42,121,	0,1416,1803,
#Partially deleted in new
chr8	7825171	7829053	chr8:7825171-7829053	3	+	7825176	7828953	0	2	54,249,	0,3633,
#Partially deleted in new
chr8	7836470	7841242	chr8:7836470-7841242	3	+	7836484	7841194	0	2	72,209,	0,4563,
#Deleted in new
chr8	7847875	7850436	chr8:7847875-7850436	1	+	7848046	7850143	8553170	3	232,153,421,	0,815,2140,
#Partially deleted in new
chr8	7847879	7860965	chr8:7847879-7860965	1	+	7848046	7860667	789624	4	228,153,76,320,	0,811,12467,12766,
#Partially deleted in new
chr8	7847895	7860930	chr8:7847895-7860930	3	+	7848046	7860833	789624	3	212,153,285,	0,795,12750,
#Partially deleted in new
chr8	7848023	7863797	chr8:7848023-7863797	1	+	7848046	7863535	789624	4	84,153,78,297,	0,667,12622,15477,
#Partially deleted in new
chr8	7848023	7863797	chr8:7848023-7863797	1	+	7848046	7863535	789624	3	84,153,297,	0,667,15477,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	7848098	7868867	chr8:7848098-7868867	0	+	7848098	7868676	789624	4	9,153,179,66,	0,592,20420,20703,
#Partially deleted in new
chr8	7848692	7863797	chr8:7848692-7863797	0	+	7848692	7862319	789624	3	151,104,297,	0,13616,14808,
#Partially deleted in new
chr8	7859177	7860982	chr8:7859177-7860982	1	+	7859230	7860833	789624	2	108,337,	0,1468,
#Partially deleted in new
chr8	7859177	7860982	chr8:7859177-7860982	1	+	7859230	7860667	789624	3	108,76,337,	0,1169,1468,
#Partially deleted in new
chr8	7881203	7882664	chr8:7881203-7882664	3	+	7881421	7882568	0	2	276,242,	0,1219,
#Deleted in new
chr8	7891002	7892555	chr8:7891002-7892555	7	-	7891002	7891002	16724991	1	1553,	0,
#Deleted in new
chr8	7894628	7896711	chr8:7894628-7896711	3	+	7894712	7896610	0	2	142,238,	0,1845,
#Partially deleted in new
chr8	7926336	7952413	chr8:7926336-7952413	3	+	7947421	7952391	789624	7	61,150,83,127,96,83,607,	0,3950,21014,22792,23696,24328,25470,
#Deleted in new
chr8	7934411	7938770	chr8:7934411-7938770	7	-	7934411	7934411	16724991	2	164,58,	0,4301,
#Partially deleted in new
chr8	7955013	8008755	chr8:7955013-8008755	3	+	7955013	7955013	5263520	7	545,64,62,68,68,65,561,	0,6219,30158,30467,30992,31523,53181,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	7955073	7990697	chr8:7955073-7990697	1	+	7955073	7955073	8553170	8	485,494,174,136,279,84,261,174,	0,5419,6159,29191,29881,30391,31936,35450,
#Deleted in new
chr8	7967343	7968544	chr8:7967343-7968544	7	-	7967343	7967343	16724991	1	1201,	0,
#Deleted in new
chr8	7971660	7973253	chr8:7971660-7973253	3	-	7971660	7973253	789624	1	1593,	0,
#Deleted in new
chr8	7976392	7977985	chr8:7976392-7977985	3	-	7976392	7977985	789624	1	1593,	0,
#Partially deleted in new
chr8	7990414	7997521	chr8:7990414-7997521	7	-	7990414	7990414	16724991	2	206,58,	0,7049,
#Deleted in new
chr8	8011781	8017011	chr8:8011781-8017011	7	-	8011781	8011781	16724991	5	1523,109,200,179,207,	0,2187,2754,3448,5023,
#Deleted in new
chr8	8019428	8024652	chr8:8019428-8024652	7	-	8019428	8019428	16724991	6	1522,109,200,179,157,202,	0,2186,2753,3447,4586,5022,
#Deleted in new
chr8	8020662	8022391	chr8:8020662-8022391	4	-	8020662	8020662	16724991	3	288,109,210,	0,952,1519,
#Deleted in new
chr8	8027076	8032305	chr8:8027076-8032305	7	-	8027076	8027076	16724991	6	1522,109,200,179,157,208,	0,2186,2753,3447,4585,5021,
#Deleted in new
chr8	8039977	8040953	chr8:8039977-8040953	7	+	8039977	8039977	16724991	1	976,	0,
#Deleted in new
chr8	8048918	8049267	chr8:8048918-8049267	7	+	8048918	8048918	16724991	1	349,	0,
#Deleted in new
chr8	8059458	8059674	chr8:8059458-8059674	7	+	8059458	8059458	16724991	1	216,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	8059571	8180527	chr8:8059571-8180527	0	+	8059571	8059571	8553170	4	103,184,136,2773,	0,87137,94823,118183,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	8059595	8199973	chr8:8059595-8199973	3	+	8059595	8059595	8553170	7	79,184,136,98,121,227,3287,	0,87113,94799,104014,130524,132200,137091,
#Deleted in new
chr8	8065598	8065816	chr8:8065598-8065816	7	+	8065598	8065598	16724991	1	218,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	8065645	8180527	chr8:8065645-8180527	0	+	8065645	8065645	8553170	4	171,217,136,2773,	0,20361,88749,112109,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	8086021	8086765	chr8:8086021-8086765	7	-	8086021	8086021	16724991	1	744,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	8088940	8089089	chr8:8088940-8089089	3	-	8088940	8088940	5263520	1	149,	0,
#Partially deleted in new
chr8	8095945	8096726	chr8:8095945-8096726	7	+	8095945	8095945	16724991	1	781,	0,
#Deleted in new
chr8	8116744	8116949	chr8:8116744-8116949	7	-	8116744	8116744	16724991	1	205,	0,
#Partially deleted in new
chr8	8154307	8216916	chr8:8154307-8216916	7	+	8154307	8154307	16724991	3	243,131,625,	0,52512,61984,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	8167818	8226614	chr8:8167818-8226614	3	-	8167818	8167818	8553170	5	265,107,139,62,219,	0,16907,52225,56007,58577,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	8188534	8189195	chr8:8188534-8189195	3	-	8188534	8188534	8553170	1	661,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	8228599	8240030	chr8:8228599-8240030	4	+	8228599	8228599	16724991	6	198,63,81,134,150,404,	0,2243,4194,7216,8526,11027,
#Partially deleted in new
chr8	8228604	8237241	chr8:8228604-8237241	5	+	8228604	8228604	16724991	7	96,63,81,102,132,266,114,	0,2238,4189,5878,7211,7428,8523,
#Deleted in new
chr8	8236002	8238350	chr8:8236002-8238350	5	-	8236002	8236002	16724991	2	361,160,	0,2188,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	8236210	8244296	chr8:8236210-8244296	4	+	8236210	8236210	16724991	4	89,150,140,198,	0,915,5330,7888,
#Deleted in new
chr8	8237207	8238926	chr8:8237207-8238926	4	+	8237207	8237207	16724991	2	68,634,	0,1085,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	8237673	8244667	chr8:8237673-8244667	7	-	8237673	8237673	16724991	7	46,111,60,121,79,140,208,	0,517,1821,2755,3648,5113,6786,
#Partially deleted in new
chr8	8238173	8241411	chr8:8238173-8241411	5	-	8238173	8238173	16724991	5	165,84,108,111,116,	0,1319,2032,2264,3122,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	8240368	8244863	chr8:8240368-8244863	4	+	8240368	8240368	16724991	2	2064,765,	0,3730,
#Partially deleted in new
chr8	8317735	8381747	chr8:8317735-8381747	1	-	8318153	8381747	0	5	1567,752,158,1832,330,	0,9974,21742,58511,63682,
#Partially deleted in new
chr8	8317736	8386498	chr8:8317736-8386498	3	-	8318153	8381747	0	6	1566,752,158,1832,417,178,	0,9973,21741,58510,63681,68584,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	8414204	8424640	chr8:8414204-8424640	3	-	8414204	8414204	8553170	3	897,617,153,	0,8192,10283,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	8414689	8424578	chr8:8414689-8424578	0	-	8414689	8414689	8553170	2	412,91,	0,9798,
#Partially deleted in new
chr8	8555737	8560965	chr8:8555737-8560965	3	-	8555737	8555737	8553170	2	351,46,	0,5182,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	8559893	8562124	chr8:8559893-8562124	3	+	8559893	8559893	8553170	3	150,137,292,	0,1307,1939,
#Partially deleted in new
chr8	8561390	8564535	chr8:8561390-8564535	1	+	8561390	8561390	8553170	2	144,429,	0,2716,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	8561393	8569688	chr8:8561393-8569688	3	+	8561393	8561393	8553170	2	141,502,	0,7793,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	8582351	8582655	chr8:8582351-8582655	3	-	8582351	8582351	8553170	1	304,	0,
#Deleted in new
chr8	8701937	8704106	chr8:8701937-8704106	3	+	8702398	8703277	789624	1	2169,	0,
#Partially deleted in new
chr8	8714054	8719536	chr8:8714054-8719536	7	-	8714054	8714054	16724991	5	236,200,205,208,126,	0,742,1362,4580,5356,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	8723692	8782479	chr8:8723692-8782479	3	-	8723692	8723692	8553170	4	42,109,141,374,	0,30307,33483,58413,
#Partially deleted in new
chr8	8783353	8893645	chr8:8783353-8893645	3	-	8786021	8893058	789624	3	2702,127,3585,	0,14011,106707,
#Partially deleted in new
chr8	8785758	8860031	chr8:8785758-8860031	0	-	8785758	8785758	8553170	4	297,111,127,42,	0,4565,11606,74231,
#Partially deleted in new
chr8	8785783	8821864	chr8:8785783-8821864	0	-	8785783	8785783	8553170	3	272,127,45,	0,11581,36036,
#Partially deleted in new
chr8	8786024	8822135	chr8:8786024-8822135	0	-	8786024	8786024	8553170	4	31,111,127,316,	0,4299,11340,35795,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	8895812	8895918	chr8:8895812-8895918	3	+	8895812	8895812	8553170	1	106,	0,
#Deleted in new
chr8	8933720	8934006	chr8:8933720-8934006	7	-	8933720	8933720	16724991	1	286,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	8961199	8963788	chr8:8961199-8963788	5	+	8961199	8961199	16724991	3	55,96,571,	0,1248,2018,
#Deleted in new
chr8	8961574	8961708	chr8:8961574-8961708	3	+	8961574	8961574	8553170	1	134,	0,
#Deleted in new
chr8	8961756	8962057	chr8:8961756-8962057	7	+	8961756	8961756	16724991	1	301,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	8961909	8979025	chr8:8961909-8979025	5	+	8961909	8961909	16724991	2	634,29,	0,17087,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	9002146	9033341	chr8:9002146-9033341	3	+	9003063	9030034	0	8	296,491,179,211,84,110,115,3550,	0,534,5823,9395,14175,16150,18203,27645,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	9002803	9033339	chr8:9002803-9033339	1	+	9003063	9030034	0	7	368,179,211,84,110,115,3548,	0,5166,8738,13518,15493,17546,26988,
#Partially deleted in new
chr8	9002843	9033338	chr8:9002843-9033338	1	+	9003063	9030034	0	8	328,179,211,84,110,115,290,790,	0,5126,8698,13478,15453,17506,26948,29705,
#Partially deleted in new
chr8	9002890	9008022	chr8:9002890-9008022	0	+	9003063	9004100	789624	3	281,223,53,	0,1183,5079,
#Partially deleted in new
chr8	9002928	9018300	chr8:9002928-9018300	0	+	9003063	9009044	789624	6	243,179,107,211,84,4,	0,5041,6103,8613,13393,15368,
#Partially deleted in new
chr8	9011662	9100099	chr8:9011662-9100099	0	+	9011662	9011662	8553170	6	90,84,110,115,110,241,	0,4659,6634,8687,76797,88196,
#Partially deleted in new
chr8	9016331	9116746	chr8:9016331-9116746	0	+	9016331	9016331	8553170	4	74,110,115,399,	0,1965,4018,100016,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	9020412	9100099	chr8:9020412-9100099	0	+	9020412	9020412	8553170	4	52,110,118,241,	0,68047,76330,79446,
#Deleted in new
chr8	9048444	9048518	chr8:9048444-9048518	3	+	9048444	9048444	5263520	1	74,	0,
#Duplicated in new
chr8	9049817	9100101	chr8:9049817-9100101	0	+	9049817	9049817	8553170	3	33,116,243,	0,12851,50041,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	9072454	9072516	chr8:9072454-9072516	3	-	9072454	9072454	8553170	1	62,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	9136254	9150696	chr8:9136254-9150696	3	-	9140793	9141651	0	2	5414,134,	0,14308,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	9139562	9151574	chr8:9139562-9151574	1	-	9140793	9141651	0	2	2106,228,	0,11784,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	9141423	9145435	chr8:9141423-9145435	3	+	9141423	9141423	8553170	3	375,91,185,	0,859,3827,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	9141521	9145423	chr8:9141521-9145423	0	+	9141521	9141521	8553170	2	277,173,	0,3729,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	9151741	9156363	chr8:9151741-9156363	1	+	9151741	9151741	8553170	4	175,138,111,212,	0,2464,3224,4410,
#Partially deleted in new
chr8	9151791	9168136	chr8:9151791-9168136	1	+	9151791	9151791	8553170	4	125,184,153,364,	0,3174,4360,15981,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	9151799	9156362	chr8:9151799-9156362	0	+	9151799	9151799	8553170	3	117,111,211,	0,3166,4352,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	9155008	9156359	chr8:9155008-9156359	0	+	9155008	9155008	8553170	2	141,208,	0,1143,
#Deleted in new
chr8	9158062	9158621	chr8:9158062-9158621	3	+	9158062	9158062	8553170	1	559,	0,
#Partially deleted in new
chr8	9180250	9182519	chr8:9180250-9182519	3	-	9180250	9180250	8553170	2	272,56,	0,2213,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	9188250	9193796	chr8:9188250-9193796	0	+	9188250	9188250	8553170	3	193,239,387,	0,1097,5159,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	9188958	9203126	chr8:9188958-9203126	0	+	9188958	9188958	8553170	4	88,239,68,628,	0,389,9965,13540,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	9189520	9256152	chr8:9189520-9256152	1	+	9189520	9189520	8553170	4	66,209,128,1372,	0,48395,63287,65260,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	9198330	9203024	chr8:9198330-9203024	1	+	9198330	9198330	8553170	2	661,526,	0,4168,
#Deleted in new
chr8	9198330	9199003	chr8:9198330-9199003	0	+	9198330	9198330	8553170	1	673,	0,
#Deleted in new
chr8	9233012	9233449	chr8:9233012-9233449	7	+	9233012	9233012	16724991	1	437,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	9249342	9258951	chr8:9249342-9258951	0	+	9249342	9249342	8553170	2	598,517,	0,9092,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	9249416	9254999	chr8:9249416-9254999	0	+	9249416	9249416	8553170	2	524,219,	0,5364,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	9249443	9304644	chr8:9249443-9304644	0	+	9249443	9249443	8553170	2	497,300,	0,54901,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	9249539	9325976	chr8:9249539-9325976	1	+	9249539	9249539	8553170	3	401,198,75,	0,70334,76362,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	9249603	9413714	chr8:9249603-9413714	0	+	9249603	9249603	8553170	4	337,402,58,66,	0,76298,111762,164045,
#Partially deleted in new
chr8	9255348	9260295	chr8:9255348-9260295	3	-	9255348	9255348	8553170	2	154,268,	0,4679,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	9287471	9287578	chr8:9287471-9287578	3	-	9287471	9287471	8553170	1	107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	9325050	9335080	chr8:9325050-9335080	1	+	9325050	9325050	789624	3	363,402,2677,	0,851,7353,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	9325145	9335081	chr8:9325145-9335081	0	+	9325145	9325145	8553170	3	268,402,167,	0,756,9769,
#Partially deleted in new
chr8	9325246	9328494	chr8:9325246-9328494	0	+	9325246	9325246	8553170	4	167,34,278,293,	0,655,779,2955,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	9325401	9390362	chr8:9325401-9390362	0	+	9325401	9325401	8553170	5	12,402,58,121,658,	0,500,35964,37860,64303,
#Partially deleted in new
chr8	9325401	9328467	chr8:9325401-9328467	0	+	9325401	9325401	8553170	3	12,402,266,	0,500,2800,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	9325901	9392706	chr8:9325901-9392706	0	+	9325901	9325901	8553170	2	402,504,	0,66301,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	9325908	9400700	chr8:9325908-9400700	0	+	9325908	9325908	8553170	4	395,58,121,125,	0,35457,37353,74667,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	9326072	9413877	chr8:9326072-9413877	1	+	9326072	9326072	8553170	5	231,58,121,262,229,	0,35293,37189,81533,87576,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	9326094	9425524	chr8:9326094-9425524	0	+	9326094	9326094	8553170	4	209,58,121,409,	0,35271,37167,99021,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	9326107	9367892	chr8:9326107-9367892	0	+	9326107	9326107	8553170	4	196,58,121,432,	0,35258,37154,41353,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	9326127	9384886	chr8:9326127-9384886	1	+	9326127	9326127	8553170	5	176,110,70,100,969,	0,6276,6798,57278,57790,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	9326127	9413878	chr8:9326127-9413878	2	+	9326127	9326127	8553170	6	176,110,157,83,121,230,	0,6276,6711,35213,37134,87521,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	9351237	9358441	chr8:9351237-9358441	3	-	9351237	9351237	8553170	3	312,150,101,	0,6364,7103,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	9371089	9371195	chr8:9371089-9371195	3	-	9371089	9371089	8553170	1	106,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	9371969	9374965	chr8:9371969-9374965	1	-	9371969	9371969	8553170	3	170,252,32,	0,885,2964,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	9374897	9436205	chr8:9374897-9436205	3	-	9374897	9374897	8553170	3	242,129,174,	0,8974,61134,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	9379979	9415940	chr8:9379979-9415940	1	-	9379979	9379979	8553170	4	393,129,100,65,	0,3892,23965,35896,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	9402961	9413878	chr8:9402961-9413878	1	+	9402961	9402961	8553170	3	199,103,230,	0,901,10687,
#Partially deleted in new
chr8	9404305	9413869	chr8:9404305-9413869	0	+	9404305	9404305	8553170	2	204,221,	0,9343,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	9453697	9457418	chr8:9453697-9457418	7	+	9453697	9453697	16724991	4	260,595,928,252,	0,607,2197,3469,
#Deleted in new
chr8	9555143	9556520	chr8:9555143-9556520	3	-	9555143	9555143	8553170	1	1377,	0,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr8	9555913	9782346	chr8:9555913-9782346	3	+	9555939	9776736	0	27	699,225,96,37,76,95,67,187,122,92,79,172,80,146,166,220,110,189,238,83,121,98,75,106,187,157,5697,	0,24245,59668,124037,124811,148749,150273,150897,152457,154041,154228,164460,170727,174976,177365,178951,179463,192110,195695,196630,205602,207233,208802,209778,210325,214192,220736,
#Partially deleted in new
chr8	9555913	9710409	chr8:9555913-9710409	1	+	9555939	9710325	789624	11	699,225,96,37,76,95,67,187,122,92,268,	0,24245,59668,124037,124811,148749,150273,150897,152457,154041,154228,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	9555931	9558831	chr8:9555931-9558831	1	+	9555939	9556671	789624	1	2900,	0,
#Deleted in new
chr8	9566259	9566526	chr8:9566259-9566526	0	+	9566259	9566259	8553170	1	267,	0,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chr8	9575006	9776929	chr8:9575006-9776929	1	+	9580196	9776736	789624	27	393,225,96,37,76,95,67,187,122,92,79,172,80,146,166,220,110,189,238,83,121,98,75,106,187,157,280,	0,5152,40575,104944,105718,129656,131180,131804,133364,134948,135135,145367,151634,155883,158272,159858,160370,173017,176602,177537,186509,188140,189709,190685,191232,195099,201643,
#Partially deleted in new
chr8	9615289	9707008	chr8:9615289-9707008	0	+	9615289	9615289	8553170	7	197,96,37,76,95,67,198,	0,292,64661,65435,89373,90897,91521,
#Deleted in new
chr8	9658294	9658438	chr8:9658294-9658438	7	-	9658294	9658294	16724991	1	144,	0,
#Partially deleted in new
chr8	9670118	9681156	chr8:9670118-9681156	0	+	9670118	9670118	8553170	6	78,63,77,58,37,432,	0,608,861,1027,9832,10606,
#Partially deleted in new
chr8	9679753	9707008	chr8:9679753-9707008	0	+	9679753	9679753	8553170	6	83,37,76,95,67,198,	0,197,971,24909,26433,27057,
#Partially deleted in new
chr8	9679845	9708406	chr8:9679845-9708406	0	+	9679845	9679845	8553170	6	142,76,95,67,187,36,	0,879,24817,26341,26965,28525,
#Partially deleted in new
chr8	9720455	9730973	chr8:9720455-9730973	0	+	9720455	9720455	8553170	4	90,103,80,84,	0,1942,6185,10434,
#Partially deleted in new
chr8	9734990	9748213	chr8:9734990-9748213	0	+	9734990	9743466	789624	4	94,110,109,190,	0,386,8473,13033,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	9740913	9751713	chr8:9740913-9751713	0	+	9740913	9740913	8553170	3	202,189,105,	0,7110,10695,
#Deleted in new
chr8	9741671	9741768	chr8:9741671-9741768	3	+	9741671	9741671	5263520	1	97,	0,
#Deleted in new
chr8	9770130	9777036	chr8:9770130-9777036	0	+	9770130	9772422	789624	3	132,55,387,	0,2238,6519,
#Deleted in new
chr8	9900063	9903397	chr8:9900063-9903397	0	-	9900063	9900063	8553170	1	3334,	0,
#Deleted in new
chr8	9900063	9901200	chr8:9900063-9901200	0	-	9900063	9900063	8553170	2	223,646,	0,491,
#Deleted in new
chr8	9900063	9903329	chr8:9900063-9903329	1	-	9900063	9900063	789624	3	223,58,2641,	0,491,625,
#Deleted in new
chr8	9903166	9904210	chr8:9903166-9904210	2	-	9903166	9903166	8553170	3	311,93,141,	0,494,903,
#Deleted in new
chr8	9903387	9903472	chr8:9903387-9903472	3	-	9903387	9903387	5263520	1	85,	0,
#Deleted in new
chr8	9903460	9905366	chr8:9903460-9905366	1	-	9903460	9903460	8553170	4	293,118,97,208,	0,609,1071,1698,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	10050484	10054254	chr8:10050484-10054254	3	-	10050484	10050484	8553170	1	3770,	0,
#Partially deleted in new
chr8	10054267	10428891	chr8:10054267-10428891	3	+	10054516	10428312	789624	6	391,69,120,105,107,744,	0,153565,190836,247266,265615,373880,
#Partially deleted in new
chr8	10054369	10428365	chr8:10054369-10428365	1	+	10054516	10428312	789624	5	289,69,105,107,218,	0,153463,247164,265513,373778,
#Partially deleted in new
chr8	10054500	10337823	chr8:10054500-10337823	1	+	10054516	10337807	789624	6	158,69,120,105,107,115,	0,153332,190603,247033,265382,283208,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	10058969	10250917	chr8:10058969-10250917	1	+	10207888	10250469	789624	4	130,69,120,495,	0,148863,186134,191453,
#Partially deleted in new
chr8	10095550	10319891	chr8:10095550-10319891	0	+	10207888	10319891	789624	6	493,75,69,120,105,9,	0,693,112282,149553,205983,224332,
#Partially deleted in new
chr8	10095551	10428885	chr8:10095551-10428885	1	+	10207888	10428312	789624	7	492,75,69,120,105,107,738,	0,692,112281,149552,205982,224331,332596,
#Partially deleted in new
chr8	10095726	10428889	chr8:10095726-10428889	1	+	10096030	10428312	789624	6	317,69,120,105,107,742,	0,112106,149377,205807,224156,332421,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	10095726	10320363	chr8:10095726-10320363	0	+	10095726	10095726	8553170	5	317,69,120,105,481,	0,112106,149377,205807,224156,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	10118004	10147423	chr8:10118004-10147423	3	-	10118004	10118004	8553170	2	1582,459,	0,28960,
#Deleted in new
chr8	10275498	10279737	chr8:10275498-10279737	3	-	10275498	10275498	8553170	3	1152,373,51,	0,2469,4188,
#Partially deleted in new
chr8	10301534	10353963	chr8:10301534-10353963	0	+	10301534	10353678	789624	3	104,107,348,	0,18348,52081,
#Partially deleted in new
chr8	10326467	10411565	chr8:10326467-10411565	0	+	10326467	10326467	8553170	2	131,465,	0,84633,
#Partially deleted in new
chr8	10336781	10337677	chr8:10336781-10337677	7	-	10336781	10336781	16724991	2	383,192,	0,704,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	10433671	10438312	chr8:10433671-10438312	3	+	10433671	10433671	8553170	1	4641,	0,
#Partially deleted in new
chr8	10474564	10481974	chr8:10474564-10481974	3	+	10474564	10474564	789624	5	67,172,138,54,114,	0,2558,3196,5574,7296,
#Deleted in new
chr8	10474788	10475045	chr8:10474788-10475045	7	-	10474788	10474788	16724991	1	257,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	10476222	10476329	chr8:10476222-10476329	3	+	10476222	10476222	8553170	1	107,	0,
#Partially deleted in new
chr8	10476596	10479420	chr8:10476596-10479420	3	-	10476596	10476596	8553170	3	1185,68,243,	0,1891,2581,
#Partially deleted in new
chr8	10477198	10481466	chr8:10477198-10481466	1	+	10477198	10477198	8553170	4	85,138,54,285,	0,562,2940,3983,
#Partially deleted in new
chr8	10477490	10479375	chr8:10477490-10479375	0	-	10477490	10477490	8553170	2	291,198,	0,1687,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	10477869	10480986	chr8:10477869-10480986	1	+	10477869	10477869	8553170	3	29,54,441,	0,2269,2676,
#Partially deleted in new
chr8	10482877	10547585	chr8:10482877-10547585	0	-	10482877	10482877	8553170	5	354,160,260,193,156,	0,1209,14834,15738,64552,
#Partially deleted in new
chr8	10484197	10518015	chr8:10484197-10518015	0	-	10484197	10484197	8553170	3	49,81,122,	0,14530,33696,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	10486806	10489666	chr8:10486806-10489666	3	+	10486806	10486806	8553170	1	2860,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	10494853	10518015	chr8:10494853-10518015	1	-	10496384	10517954	789624	6	1613,178,61,88,193,122,	0,1746,2858,3030,3762,23040,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	10494853	10547557	chr8:10494853-10547557	1	-	10496384	10497964	789624	6	1613,178,61,88,81,128,	0,1746,2858,3030,3874,52576,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	10494853	10517954	chr8:10494853-10517954	3	-	10496325	10517954	789624	6	1613,143,61,88,193,61,	0,1781,2858,3030,3762,23040,
#Partially deleted in new
chr8	10496325	10517983	chr8:10496325-10517983	1	-	10496325	10517954	8553170	5	141,143,260,193,90,	0,309,1386,2290,21568,
#Partially deleted in new
chr8	10525545	10538818	chr8:10525545-10538818	3	+	10525585	10538793	789624	5	194,193,251,143,343,	0,3961,5749,7360,12930,
#Partially deleted in new
chr8	10525545	10554166	chr8:10525545-10554166	1	+	10525585	10554032	789624	5	194,193,251,143,224,	0,3961,5749,7360,28397,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	10529411	10545198	chr8:10529411-10545198	0	+	10529411	10531553	789624	5	288,418,143,1298,227,	0,1883,3494,10846,15560,
#Partially deleted in new
chr8	10606348	10655102	chr8:10606348-10655102	3	-	10606894	10623201	789624	4	6998,142,628,205,	0,10097,16244,48549,
#Deleted in new
chr8	10666977	10667070	chr8:10666977-10667070	3	+	10666977	10666977	5263520	1	93,	0,
#Partially deleted in new
chr8	10672636	10700593	chr8:10672636-10700593	3	+	10672665	10700471	789624	4	77,193,407,359,	0,2009,24962,27598,
#Partially deleted in new
chr8	10672652	10688484	chr8:10672652-10688484	0	+	10672652	10672652	8553170	3	61,193,201,	0,1993,15631,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	10672652	10689756	chr8:10672652-10689756	0	+	10672665	10687138	789624	4	61,193,192,1473,	0,1993,14427,15631,
#Deleted in new
chr8	10672652	10679999	chr8:10672652-10679999	0	+	10672652	10672652	8553170	4	61,170,193,105,	0,931,1993,7242,
#Partially deleted in new
chr8	10672660	10700590	chr8:10672660-10700590	0	+	10672665	10687138	789624	5	53,193,192,407,356,	0,1985,14419,24938,27574,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	10672670	10692971	chr8:10672670-10692971	0	+	10672670	10690931	789624	3	43,193,2102,	0,1975,18199,
#Deleted in new
chr8	10674645	10675838	chr8:10674645-10675838	0	+	10674645	10674645	8553170	2	193,268,	0,925,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	10686568	10686687	chr8:10686568-10686687	7	+	10686568	10686568	16724991	1	119,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	10723767	10730512	chr8:10723767-10730512	3	-	10725737	10730433	789624	2	2899,317,	0,6428,
#Partially deleted in new
chr8	10725398	10839847	chr8:10725398-10839847	3	-	10725737	10839756	789624	6	1268,93,79,93,110,110,	0,100753,106266,107493,109267,114339,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	10729313	10764723	chr8:10729313-10764723	3	+	10729313	10729313	8553170	3	317,117,387,	0,24888,35023,
#Partially deleted in new
chr8	10729577	10771392	chr8:10729577-10771392	0	+	10729577	10729577	8553170	2	53,198,	0,41617,
#Partially deleted in new
chr8	10764962	10839876	chr8:10764962-10839876	3	-	10765400	10839756	789624	7	954,77,93,79,93,110,139,	0,55230,61189,66702,67929,69703,74775,
#Partially deleted in new
chr8	10765158	10839876	chr8:10765158-10839876	1	-	10765785	10839756	789624	6	758,93,79,93,110,139,	0,60993,66506,67733,69507,74579,
#Partially deleted in new
chr8	10765822	10839771	chr8:10765822-10839771	0	-	10765822	10839756	789624	7	94,77,93,79,93,110,64,	0,54370,60329,65842,67069,68843,73885,
#Partially deleted in new
chr8	10765854	10839876	chr8:10765854-10839876	0	-	10787814	10839756	789624	7	62,202,93,79,93,110,139,	0,21769,60297,65810,67037,68811,73883,
#Partially deleted in new
chr8	10787521	10826169	chr8:10787521-10826169	0	-	10820269	10826169	789624	3	304,118,18,	0,32671,38630,
#Partially deleted in new
chr8	10821859	10832984	chr8:10821859-10832984	0	-	10821859	10821859	8553170	4	265,93,79,93,	0,4292,9805,11032,
#Deleted in new
chr8	10825372	10825443	chr8:10825372-10825443	3	-	10825372	10825372	5263520	1	71,	0,
#Partially deleted in new
chr8	10832890	10839840	chr8:10832890-10839840	0	-	10832890	10832890	8553170	4	94,294,110,103,	0,597,1775,6847,
#Partially deleted in new
chr8	10834351	10839884	chr8:10834351-10839884	0	-	10834351	10834351	8553170	2	424,147,	0,5386,
#Partially deleted in new
chr8	10840575	10846501	chr8:10840575-10846501	3	+	10840575	10840575	8553170	3	53,102,284,	0,1057,5642,
#Deleted in new
chr8	10856084	10859436	chr8:10856084-10859436	3	-	10856084	10856084	8553170	1	3352,	0,
#Partially deleted in new
chr8	10896044	11002481	chr8:10896044-11002481	0	-	10897951	11002481	789624	3	2872,197,94,	0,28589,106343,
#Partially deleted in new
chr8	10896522	11201366	chr8:10896522-11201366	3	-	10897951	11201339	789624	3	2394,197,791,	0,28111,304053,
#Deleted in new
chr8	11035205	11035302	chr8:11035205-11035302	3	-	11035205	11035205	5263520	1	97,	0,
#Partially deleted in new
chr8	11062646	11067089	chr8:11062646-11067089	3	-	11062646	11062646	789624	2	399,240,	0,4203,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	11104690	11106704	chr8:11104690-11106704	3	-	11104690	11104690	8553170	1	2014,	0,
#Deleted in new
chr8	11107787	11109726	chr8:11107787-11109726	3	-	11107787	11107787	8553170	1	1939,	0,
#Partially deleted in new
chr8	11111644	11200834	chr8:11111644-11200834	0	-	11114073	11200834	789624	3	248,221,259,	0,2227,88931,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	11123380	11126064	chr8:11123380-11126064	3	-	11123380	11123380	8553170	2	1437,304,	0,2380,
#Partially deleted in new
chr8	11136897	11138607	chr8:11136897-11138607	3	-	11136897	11136897	8553170	1	1710,	0,
#Deleted in new
chr8	11175050	11175570	chr8:11175050-11175570	7	+	11175050	11175050	16724991	1	520,	0,
#Partially deleted in new
chr8	11194435	11201339	chr8:11194435-11201339	1	-	11195121	11201339	789624	2	786,764,	0,6140,
#Deleted in new
chr8	11202964	11203671	chr8:11202964-11203671	3	+	11202964	11202964	8553170	1	707,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	11247625	11267865	chr8:11247625-11267865	3	-	11247625	11247625	8553170	2	164,77,	0,20163,
#Deleted in new
chr8	11256019	11256602	chr8:11256019-11256602	7	+	11256019	11256019	16724991	1	583,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	11281363	11282501	chr8:11281363-11282501	7	-	11281363	11281363	16724991	2	408,156,	0,982,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	11283480	11285068	chr8:11283480-11285068	3	-	11283480	11283480	8553170	1	1588,	0,
#Deleted in new
chr8	11283499	11285068	chr8:11283499-11285068	0	-	11283499	11283499	8553170	1	1569,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	11284415	11328146	chr8:11284415-11328146	3	+	11284888	11322788	789624	10	655,109,126,174,218,162,142,221,152,5522,	0,10778,15607,20425,21774,25111,30507,32257,35271,38209,
#Partially deleted in new
chr8	11284826	11324527	chr8:11284826-11324527	0	+	11284888	11297914	789624	11	244,109,52,126,174,218,162,142,221,152,1903,	0,10367,13073,15196,20014,21363,24700,30096,31846,34860,37798,
#Partially deleted in new
chr8	11285093	11323057	chr8:11285093-11323057	1	+	11295266	11322788	789624	10	223,109,126,174,218,162,142,221,152,433,	0,10100,14929,19747,21096,24433,29829,31579,34593,37531,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	11294774	11300777	chr8:11294774-11300777	0	+	11294774	11294774	8553170	2	528,755,	0,5248,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	11315858	11325429	chr8:11315858-11325429	3	-	11315858	11315858	8553170	2	5742,114,	0,9457,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	11330887	11332208	chr8:11330887-11332208	3	+	11331106	11332123	789624	1	1321,	0,
#Partially deleted in new
chr8	11339636	11368452	chr8:11339636-11368452	7	+	11339636	11339636	16724991	9	83,187,43,71,150,173,270,206,174,	0,16468,18499,19577,21749,21998,25083,25946,28642,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	11345747	11347502	chr8:11345747-11347502	3	-	11345747	11345747	8553170	2	893,206,	0,1549,
#Partially deleted in new
chr8	11347644	11366088	chr8:11347644-11366088	4	+	11347644	11347644	16724991	8	61,110,187,43,71,173,270,506,	0,7424,8460,10491,11569,13990,17075,17938,
#Partially deleted in new
chr8	11356119	11365722	chr8:11356119-11365722	4	+	11356119	11356119	16724991	7	172,43,71,173,66,270,140,	0,2016,3094,5515,6788,8600,9463,
#Partially deleted in new
chr8	11356119	11365722	chr8:11356119-11365722	5	+	11356119	11356119	16724991	8	172,43,71,150,173,91,270,140,	0,2016,3094,5266,5515,6763,8600,9463,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	11363783	11365801	chr8:11363783-11365801	4	+	11363783	11363783	16724991	3	316,270,219,	0,936,1799,
#Partially deleted in new
chr8	11368401	11438657	chr8:11368401-11438657	3	+	11368401	11368401	5263520	7	51,189,100,216,273,171,222,	0,15411,32664,65518,66428,69638,70034,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	11379394	11379675	chr8:11379394-11379675	3	+	11379394	11379394	8553170	1	281,	0,
#Partially deleted in new
chr8	11390423	11435001	chr8:11390423-11435001	0	+	11390423	11390423	8553170	4	312,100,216,172,	0,10642,43496,44406,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	11392410	11392517	chr8:11392410-11392517	3	-	11392410	11392410	8553170	1	107,	0,
#Partially deleted in new
chr8	11421462	11466767	chr8:11421462-11466767	3	-	11424372	11444411	789624	3	3174,778,142,	0,22568,45163,
#Partially deleted in new
chr8	11423393	11443701	chr8:11423393-11443701	0	-	11423393	11423393	8553170	2	1243,82,	0,20226,
#Partially deleted in new
chr8	11423850	11444886	chr8:11423850-11444886	1	-	11424372	11444411	789624	2	786,856,	0,20180,
#Partially deleted in new
chr8	11423942	11474715	chr8:11423942-11474715	0	-	11423942	11423942	8553170	2	694,107,	0,50666,
#Partially deleted in new
chr8	11424017	11445369	chr8:11424017-11445369	1	-	11424372	11444411	789624	3	619,778,223,	0,20013,21129,
#Partially deleted in new
chr8	11444030	11475908	chr8:11444030-11475908	0	-	11444030	11444411	8553170	2	778,43,	0,31835,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	11444137	11467594	chr8:11444137-11467594	0	-	11444137	11444411	789624	4	671,151,219,79,	0,1282,2265,23378,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	11444576	11466735	chr8:11444576-11466735	0	-	11444576	11444576	8553170	4	232,151,219,110,	0,843,1826,22049,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	11479202	11481068	chr8:11479202-11481068	3	-	11479202	11479202	8553170	3	437,209,64,	0,1150,1802,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	11486893	11564598	chr8:11486893-11564598	1	+	11548069	11564108	789624	12	274,52,94,99,104,147,153,180,77,151,132,696,	0,59158,61138,62130,63265,67849,68438,69764,71068,74408,76085,77009,
#Partially deleted in new
chr8	11494000	11564604	chr8:11494000-11564604	3	+	11543224	11564108	789624	13	591,124,52,94,99,104,147,153,180,77,151,132,702,	0,49223,52051,54031,55023,56158,60742,61331,62657,63961,67301,68978,69902,
#Partially deleted in new
chr8	11494168	11509891	chr8:11494168-11509891	0	+	11494168	11494168	8553170	2	423,742,	0,14981,
#Partially deleted in new
chr8	11494389	11564528	chr8:11494389-11564528	1	+	11548069	11564108	789624	12	202,52,94,99,104,147,153,180,77,151,132,626,	0,51662,53642,54634,55769,60353,60942,62268,63572,66912,68589,69513,
#Partially deleted in new
chr8	11545730	11549103	chr8:11545730-11549103	0	+	11545730	11545730	8553170	3	373,94,80,	0,2301,3293,
#Partially deleted in new
chr8	11549993	11556788	chr8:11549993-11556788	0	+	11549993	11549993	8553170	4	269,147,153,131,	0,4749,5338,6664,
#Partially deleted in new
chr8	11552487	11564694	chr8:11552487-11564694	3	-	11552487	11552487	8553170	9	1093,74,145,67,80,89,89,75,77,	0,1642,3230,3578,4094,5402,6088,6424,12130,
#Deleted in new
chr8	11556250	11558022	chr8:11556250-11558022	0	-	11556250	11556250	8553170	2	411,133,	0,1639,
#Deleted in new
chr8	11558465	11560020	chr8:11558465-11560020	1	-	11558465	11558465	8553170	3	282,75,237,	0,446,1318,
#Partially deleted in new
chr8	11560332	11564599	chr8:11560332-11564599	0	+	11560332	11560332	8553170	3	1120,132,697,	0,2646,3570,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	11576312	11581342	chr8:11576312-11581342	3	+	11576312	11576312	789624	3	1005,272,873,	0,2057,4157,
#Partially deleted in new
chr8	11676958	11760000	chr8:11676958-11760000	1	+	11748920	11758475	789624	7	105,268,170,126,88,149,1708,	0,23552,71957,73152,78087,79976,81334,
#Partially deleted in new
chr8	11676959	11708360	chr8:11676959-11708360	0	+	11708312	11708360	789624	3	104,268,505,	0,23551,30896,
#Partially deleted in new
chr8	11692625	11708381	chr8:11692625-11708381	0	+	11708312	11708381	789624	3	35,271,526,	0,7882,15230,
#Partially deleted in new
chr8	11704150	11757082	chr8:11704150-11757082	0	+	11748920	11757082	789624	5	154,170,126,88,148,	0,44765,45960,50895,52784,
#Partially deleted in new
chr8	11704203	11760002	chr8:11704203-11760002	3	+	11708312	11758475	0	7	101,1073,167,126,88,149,1710,	0,3652,44715,45907,50842,52731,54089,
#Partially deleted in new
chr8	11704221	11708662	chr8:11704221-11708662	0	+	11708312	11708662	789624	3	83,120,807,	0,1692,3634,
#Partially deleted in new
chr8	11708232	11758522	chr8:11708232-11758522	1	+	11708312	11758475	0	6	696,170,126,88,149,230,	0,40683,41878,46813,48702,50060,
#Partially deleted in new
chr8	11708312	11759131	chr8:11708312-11759131	1	+	11708312	11758475	789624	9	15,111,66,421,167,126,88,149,839,	0,16,128,195,40606,41798,46733,48622,49980,
#Deleted in new
chr8	11756492	11758765	chr8:11756492-11758765	0	+	11756492	11756492	8553170	2	591,473,	0,1800,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	11761255	11763223	chr8:11761255-11763223	3	+	11761255	11761255	5263520	1	1968,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	11761386	11762800	chr8:11761386-11762800	0	+	11761386	11761386	8553170	1	1414,	0,
#Partially deleted in new
chr8	11769638	11787345	chr8:11769638-11787345	3	+	11771447	11786273	0	5	153,140,353,197,1383,	0,1807,9959,13564,16324,
#Partially deleted in new
chr8	11769698	11787340	chr8:11769698-11787340	1	+	11771447	11786273	0	6	93,162,140,353,197,1378,	0,475,1747,9899,13504,16264,
#Partially deleted in new
chr8	11769708	11787345	chr8:11769708-11787345	1	+	11779642	11786273	0	4	83,353,197,1383,	0,9889,13494,16254,
#Partially deleted in new
chr8	11769709	11786097	chr8:11769709-11786097	0	+	11771447	11783247	789624	4	82,140,197,135,	0,1736,13493,16253,
#Partially deleted in new
chr8	11769709	11786374	chr8:11769709-11786374	1	+	11771447	11786273	0	5	82,162,145,197,412,	0,464,1736,13493,16253,
#Partially deleted in new
chr8	11769738	11787346	chr8:11769738-11787346	1	+	11771447	11786273	0	5	597,140,353,197,1384,	0,1707,9859,13464,16224,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	11782611	11786656	chr8:11782611-11786656	0	+	11782611	11782611	8553170	2	788,694,	0,3351,
#Deleted in new
chr8	11790004	11790386	chr8:11790004-11790386	7	+	11790004	11790004	16724991	1	382,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	11795572	11839304	chr8:11795572-11839304	1	+	11808886	11838609	0	8	439,98,184,129,192,177,153,917,	0,13221,14094,26177,30451,34671,35945,42815,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	11795572	11839304	chr8:11795572-11839304	1	+	11802832	11838609	0	9	439,173,98,184,129,192,177,153,917,	0,7186,13221,14094,26177,30451,34671,35945,42815,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	11795572	11839304	chr8:11795572-11839304	3	+	11802832	11838609	0	10	439,198,173,98,184,129,192,177,153,917,	0,6685,7186,13221,14094,26177,30451,34671,35945,42815,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	11797927	11802512	chr8:11797927-11802512	3	-	11797927	11797927	8553170	2	220,591,	0,3994,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	11801697	11802568	chr8:11801697-11802568	1	-	11801697	11801697	8553170	2	323,148,	0,723,
#Partially deleted in new
chr8	11802238	11821818	chr8:11802238-11821818	0	+	11802832	11821818	789624	5	217,173,98,184,69,	0,520,6555,7428,19511,
#Partially deleted in new
chr8	11802610	11839309	chr8:11802610-11839309	1	+	11802832	11838609	0	8	321,98,184,129,192,177,153,922,	0,6183,7056,19139,23413,27633,28907,35777,
#Partially deleted in new
chr8	11802610	11839304	chr8:11802610-11839304	1	+	11808886	11838609	0	9	321,197,98,184,129,192,177,153,917,	0,711,6183,7056,19139,23413,27633,28907,35777,
#Partially deleted in new
chr8	11802642	11839210	chr8:11802642-11839210	0	+	11802642	11802642	8553170	5	268,137,177,153,823,	0,23436,27601,28875,35745,
#Partially deleted in new
chr8	11802738	11838783	chr8:11802738-11838783	1	+	11802832	11838609	0	7	193,98,184,192,177,153,396,	0,6055,6928,23285,27505,28779,35649,
#Partially deleted in new
chr8	11802740	11831667	chr8:11802740-11831667	0	+	11802832	11821795	789624	6	191,59,129,192,177,150,	0,7051,19009,23283,27503,28777,
#Partially deleted in new
chr8	11802740	11838839	chr8:11802740-11838839	0	+	11802832	11803360	789624	9	191,197,98,184,129,192,177,153,452,	0,581,6053,6926,19009,23283,27503,28777,35647,
#Partially deleted in new
chr8	11802745	11831581	chr8:11802745-11831581	0	+	11802832	11809723	789624	6	186,184,129,192,177,64,	0,6921,19004,23278,27498,28772,
#Partially deleted in new
chr8	11802765	11838905	chr8:11802765-11838905	1	+	11802832	11838609	789624	8	145,98,184,129,192,177,153,518,	0,6028,6901,18984,23258,27478,28752,35622,
#Deleted in new
chr8	11802767	11803832	chr8:11802767-11803832	0	+	11802767	11802767	8553170	3	164,135,511,	0,323,554,
#Deleted in new
chr8	11802783	11803815	chr8:11802783-11803815	0	+	11802783	11802783	8553170	2	148,494,	0,538,
#Partially deleted in new
chr8	11803011	11838960	chr8:11803011-11838960	1	+	11808886	11838609	0	8	507,98,184,129,192,177,153,573,	0,5782,6655,18738,23012,27232,28506,35376,
#Partially deleted in new
chr8	11803088	11839304	chr8:11803088-11839304	1	+	11808886	11838609	0	8	137,98,184,129,192,177,153,917,	0,5705,6578,18661,22935,27155,28429,35299,
#Deleted in new
chr8	11803094	11803500	chr8:11803094-11803500	0	+	11803094	11803094	8553170	2	131,196,	0,210,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	11807942	11838840	chr8:11807942-11838840	1	+	11808886	11838609	0	8	375,98,184,129,192,177,153,453,	0,851,1724,13807,18081,22301,23575,30445,
#Partially deleted in new
chr8	11808416	11838967	chr8:11808416-11838967	1	+	11808517	11838609	789624	7	475,184,129,192,177,153,580,	0,1250,13333,17607,21827,23101,29971,
#Deleted in new
chr8	11808489	11809976	chr8:11808489-11809976	0	+	11808489	11808489	8553170	2	402,310,	0,1177,
#Partially deleted in new
chr8	11808509	11826096	chr8:11808509-11826096	0	+	11808509	11808509	8553170	4	382,184,129,73,	0,1157,13240,17514,
#Partially deleted in new
chr8	11808790	11830275	chr8:11808790-11830275	0	+	11808886	11826102	789624	5	101,184,129,137,32,	0,876,12959,17288,21453,
#Partially deleted in new
chr8	11809143	11839114	chr8:11809143-11839114	1	+	11809724	11838609	0	7	347,184,129,192,177,153,727,	0,523,12606,16880,21100,22374,29244,
#Partially deleted in new
chr8	11809255	11838613	chr8:11809255-11838613	1	+	11809724	11838609	0	6	595,129,192,177,153,226,	0,12494,16768,20988,22262,29132,
#Partially deleted in new
chr8	11821780	11831596	chr8:11821780-11831596	0	+	11821780	11821780	8553170	4	98,216,177,79,	0,4219,8463,9737,
#Deleted in new
chr8	11830279	11831794	chr8:11830279-11831794	0	+	11830279	11830279	8553170	2	141,277,	0,1238,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	11842523	11868229	chr8:11842523-11868229	3	-	11845124	11853454	0	10	2699,129,117,144,86,119,115,86,151,229,	0,3137,4528,5155,5543,6522,8342,10086,10805,25477,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	11842523	11845793	chr8:11842523-11845793	0	-	11845124	11845793	789624	4	159,227,141,133,	0,1491,2558,3137,
#Deleted in new
chr8	11844019	11848703	chr8:11844019-11848703	0	-	11844019	11844019	8553170	5	1203,129,117,144,637,	0,1641,3032,3659,4047,
#Partially deleted in new
chr8	11844052	11868112	chr8:11844052-11868112	1	-	11845124	11853454	0	11	189,141,129,117,144,86,119,115,86,151,112,	0,1029,1608,2999,3626,4014,4993,6813,8557,9276,23948,
#Partially deleted in new
chr8	11844319	11868087	chr8:11844319-11868087	1	-	11845124	11853454	0	11	903,129,117,144,86,119,115,86,151,74,87,	0,1341,2732,3359,3747,4726,6546,8290,9009,17086,23681,
#Partially deleted in new
chr8	11844339	11868079	chr8:11844339-11868079	1	-	11845124	11853454	0	11	883,129,117,144,86,119,115,86,151,119,79,	0,1321,2712,3339,3727,4706,6526,8270,8989,17021,23661,
#Partially deleted in new
chr8	11844369	11868106	chr8:11844369-11868106	1	-	11845124	11853454	0	11	853,129,117,144,86,119,115,86,151,83,106,	0,1291,2682,3309,3697,4676,6496,8240,8959,13488,23631,
#Deleted in new
chr8	11845660	11848509	chr8:11845660-11848509	0	-	11845660	11845660	8553170	4	129,117,86,98,	0,1391,2406,2751,
#Deleted in new
chr8	11846153	11846391	chr8:11846153-11846391	3	-	11846153	11846153	8553170	1	238,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	11847092	11849578	chr8:11847092-11849578	0	-	11847092	11847092	8553170	4	76,144,86,533,	0,586,974,1953,
#Deleted in new
chr8	11847116	11848627	chr8:11847116-11848627	0	-	11847116	11847116	8553170	4	52,144,86,216,	0,562,950,1295,
#Partially deleted in new
chr8	11847678	11850047	chr8:11847678-11850047	0	-	11847678	11847678	8553170	4	144,86,119,50,	0,388,1367,2319,
#Partially deleted in new
chr8	11848073	11868052	chr8:11848073-11868052	0	-	11848073	11853454	789624	6	79,119,115,86,151,83,	0,972,2792,4536,5255,19896,
#Partially deleted in new
chr8	11848088	11867693	chr8:11848088-11867693	0	-	11848088	11853454	789624	6	64,119,115,86,151,440,	0,957,2777,4521,5240,19165,
#Partially deleted in new
chr8	11848103	11868917	chr8:11848103-11868917	0	-	11848103	11853454	789624	6	49,119,115,86,151,41,	0,942,2762,4506,5225,20773,
#Partially deleted in new
chr8	11848486	11868058	chr8:11848486-11868058	0	-	11848486	11848486	8553170	6	21,119,115,86,151,58,	0,559,2379,4123,4842,19514,
#Partially deleted in new
chr8	11849045	11868735	chr8:11849045-11868735	0	-	11849045	11853454	789624	5	119,115,86,151,89,	0,1820,3564,4283,19601,
#Partially deleted in new
chr8	11849060	11862468	chr8:11849060-11862468	0	-	11849060	11853454	789624	5	104,115,86,151,124,	0,1805,3549,4268,13284,
#Partially deleted in new
chr8	11849061	11868739	chr8:11849061-11868739	0	-	11849061	11853454	789624	5	103,115,86,151,69,	0,1804,3548,4267,19609,
#Partially deleted in new
chr8	11849083	11868713	chr8:11849083-11868713	0	-	11849083	11853454	789624	6	81,115,86,151,83,43,	0,1782,3526,4245,8774,19587,
#Partially deleted in new
chr8	11850614	11853462	chr8:11850614-11853462	0	-	11850614	11850614	8553170	3	366,86,134,	0,1995,2714,
#Partially deleted in new
chr8	11850864	11853819	chr8:11850864-11853819	0	-	11850864	11850864	8553170	3	116,86,491,	0,1745,2464,
#Partially deleted in new
chr8	11850916	11868118	chr8:11850916-11868118	0	-	11850916	11853454	789624	5	64,86,151,138,118,	0,1693,2412,16337,17084,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	11852609	11869448	chr8:11852609-11869448	0	-	11852609	11853454	789624	3	86,151,527,	0,719,16312,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	11853357	11854925	chr8:11853357-11854925	0	-	11853357	11853454	789624	2	122,246,	0,1322,
#Partially deleted in new
chr8	11895849	11896870	chr8:11895849-11896870	7	-	11895849	11895849	16724991	2	268,109,	0,912,
#Deleted in new
chr8	11919899	11920809	chr8:11919899-11920809	7	-	11919899	11919899	16724991	1	910,	0,
#Deleted in new
chr8	11928596	11929563	chr8:11928596-11929563	5	-	11928596	11928596	16724991	1	967,	0,
#Deleted in new
chr8	11973936	11974599	chr8:11973936-11974599	3	-	11973936	11974599	789624	2	182,55,	0,608,
#Partially deleted in new
chr8	11982320	11984590	chr8:11982320-11984590	3	+	11982320	11984590	789624	2	64,170,	0,2100,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	11993173	11996312	chr8:11993173-11996312	3	-	11993979	11996251	789624	2	949,119,	0,3020,
#Partially deleted in new
chr8	11993927	11996312	chr8:11993927-11996312	1	-	11993979	11996251	789624	2	195,119,	0,2266,
#Deleted in new
chr8	11999086	11999468	chr8:11999086-11999468	7	+	11999086	11999086	16724991	1	382,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	12003399	12004082	chr8:12003399-12004082	7	-	12003399	12003399	16724991	1	683,	0,
#Deleted in new
chr8	12003553	12003707	chr8:12003553-12003707	5	-	12003553	12003553	16724991	1	154,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	12006187	12015193	chr8:12006187-12015193	7	-	12006187	12006187	16724991	2	2778,363,	0,8643,
#Deleted in new
chr8	12014830	12015049	chr8:12014830-12015049	5	-	12014830	12014830	16724991	1	219,	0,
#Deleted in new
chr8	12025243	12025598	chr8:12025243-12025598	7	-	12025243	12025243	16724991	1	355,	0,
#Deleted in new
chr8	12033645	12034612	chr8:12033645-12034612	7	-	12033645	12033645	16724991	1	967,	0,
#Deleted in new
chr8	12043505	12043670	chr8:12043505-12043670	7	-	12043505	12043505	16724991	1	165,	0,
#Partially deleted in new
chr8	12064388	12071747	chr8:12064388-12071747	3	-	12064388	12071747	789624	2	182,58,	0,7301,
#Deleted in new
chr8	12087395	12087445	chr8:12087395-12087445	7	-	12087395	12087395	16724991	1	50,	0,
#Deleted in new
chr8	12095175	12099536	chr8:12095175-12099536	7	-	12095175	12095175	16724991	2	164,58,	0,4303,
#Partially deleted in new
chr8	12104388	12115516	chr8:12104388-12115516	3	+	12108193	12113158	789624	6	45,83,127,96,83,2943,	0,3734,5511,6411,7043,8185,
#Partially deleted in new
chr8	12108171	12113158	chr8:12108171-12113158	1	+	12108193	12113158	789624	5	34,127,96,83,585,	0,1728,2628,3260,4402,
#Partially deleted in new
chr8	12115781	12177550	chr8:12115781-12177550	3	+	12115781	12115781	8553170	4	544,62,143,169,	0,29857,61041,61600,
#Deleted in new
chr8	12128106	12129298	chr8:12128106-12129298	7	-	12128106	12128106	16724991	1	1192,	0,
#Deleted in new
chr8	12132416	12134438	chr8:12132416-12134438	3	-	12132416	12134009	789624	1	2022,	0,
#Deleted in new
chr8	12137167	12139077	chr8:12137167-12139077	3	-	12137167	12138760	789624	1	1910,	0,
#Deleted in new
chr8	12150894	12151134	chr8:12150894-12151134	7	-	12150894	12150894	16724991	1	240,	0,
#Deleted in new
chr8	12172760	12175771	chr8:12172760-12175771	7	-	12172760	12172760	16724991	4	963,109,200,123,	0,1627,2194,2888,
#Partially deleted in new
chr8	12178696	12182719	chr8:12178696-12182719	7	+	12178696	12178696	16724991	4	127,115,76,132,	0,1669,2793,3891,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	12182095	12191844	chr8:12182095-12191844	0	-	12188112	12189842	789624	7	1611,150,134,102,114,81,66,	0,3280,4604,5976,6215,7712,9683,
#Partially deleted in new
chr8	12182097	12194082	chr8:12182097-12194082	0	-	12185437	12194070	789624	6	1609,150,134,81,63,108,	0,3278,4602,7710,9681,11877,
#Partially deleted in new
chr8	12182109	12193682	chr8:12182109-12193682	0	-	12186606	12189842	789624	7	1597,150,266,134,81,63,103,	0,3266,4242,4590,7698,9669,11470,
#Partially deleted in new
chr8	12182109	12194105	chr8:12182109-12194105	0	-	12191834	12194070	789624	6	1597,150,134,81,63,229,	0,3266,4590,7698,9669,11767,
#Partially deleted in new
chr8	12182450	12194120	chr8:12182450-12194120	3	-	12183605	12194070	789624	7	1256,150,266,134,81,63,146,	0,2925,3901,4249,7357,9328,11524,
#Partially deleted in new
chr8	12182555	12194070	chr8:12182555-12194070	1	-	12183605	12194070	789624	8	1151,150,266,134,102,81,63,96,	0,2820,3796,4144,5516,7252,9223,11419,
#Partially deleted in new
chr8	12183120	12194133	chr8:12183120-12194133	0	-	12185437	12194070	789624	4	586,292,134,159,	0,2113,3579,10854,
#Partially deleted in new
chr8	12183392	12194070	chr8:12183392-12194070	0	-	12185375	12194070	789624	4	314,292,63,96,	0,1841,8386,10582,
#Partially deleted in new
chr8	12183440	12186386	chr8:12183440-12186386	0	-	12183440	12183440	8553170	2	266,1153,	0,1793,
#Partially deleted in new
chr8	12183452	12194050	chr8:12183452-12194050	0	-	12183452	12183452	8553170	4	254,292,63,76,	0,1781,8326,10522,
#Partially deleted in new
chr8	12183479	12194082	chr8:12183479-12194082	0	-	12191834	12194070	789624	5	227,292,134,63,206,	0,1754,3220,8299,10397,
#Partially deleted in new
chr8	12185148	12194127	chr8:12185148-12194127	1	-	12185437	12194070	789624	5	377,134,81,63,153,	0,1551,4659,6630,8826,
#Partially deleted in new
chr8	12185233	12191813	chr8:12185233-12191813	0	-	12185233	12185233	8553170	3	314,81,35,	0,4574,6545,
#Partially deleted in new
chr8	12185375	12194098	chr8:12185375-12194098	0	-	12191834	12194070	789624	8	150,266,134,102,81,63,74,124,	0,976,1324,2696,4432,6403,8235,8599,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	12185375	12194065	chr8:12185375-12194065	0	-	12188352	12194065	789624	7	150,134,145,114,81,63,91,	0,1324,2696,2935,4432,6403,8599,
#Partially deleted in new
chr8	12185454	12194108	chr8:12185454-12194108	0	-	12185454	12185454	8553170	6	71,482,102,81,63,134,	0,897,2617,4353,6324,8520,
#Partially deleted in new
chr8	12185495	12194089	chr8:12185495-12194089	0	-	12191879	12194070	789624	4	30,81,234,213,	0,4312,6283,8381,
#Partially deleted in new
chr8	12186061	12194067	chr8:12186061-12194067	0	-	12186695	12194067	789624	3	772,63,93,	0,5717,7913,
#Partially deleted in new
chr8	12186453	12194073	chr8:12186453-12194073	1	-	12186695	12194070	789624	5	380,102,81,63,99,	0,1618,3354,5325,7521,
#Deleted in new
chr8	12194466	12196280	chr8:12194466-12196280	3	+	12194466	12194466	8553170	2	971,390,	0,1424,
#Deleted in new
chr8	12205758	12206389	chr8:12205758-12206389	7	-	12205758	12205758	16724991	1	631,	0,
#Partially deleted in new
chr8	12290070	12296180	chr8:12290070-12296180	7	-	12290070	12290070	16724991	2	152,32,	0,6078,
#Partially deleted in new
chr8	12310961	12318316	chr8:12310961-12318316	3	-	12310961	12318316	789624	2	182,58,	0,7297,
#Deleted in new
chr8	12333643	12333693	chr8:12333643-12333693	7	-	12333643	12333643	16724991	1	50,	0,
#Deleted in new
chr8	12341425	12345776	chr8:12341425-12345776	7	-	12341425	12341425	16724991	2	162,78,	0,4273,
#Partially deleted in new
chr8	12356135	12359391	chr8:12356135-12359391	7	+	12356135	12356135	16724991	4	131,96,83,579,	0,908,1540,2677,
#Partially deleted in new
chr8	12362018	12368615	chr8:12362018-12368615	1	+	12362018	12362018	8553170	2	544,377,	0,6220,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	12362381	12388296	chr8:12362381-12388296	3	+	12362381	12362381	8553170	6	181,64,68,125,62,46,	0,5857,8379,25359,25576,25869,
#Deleted in new
chr8	12374365	12375546	chr8:12374365-12375546	7	-	12374365	12374365	16724991	1	1181,	0,
#Deleted in new
chr8	12378678	12380265	chr8:12378678-12380265	7	-	12378678	12378678	16724991	1	1587,	0,
#Partially deleted in new
chr8	12393208	12400366	chr8:12393208-12400366	7	-	12393208	12393208	16724991	2	206,59,	0,7099,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	12412826	12414373	chr8:12412826-12414373	3	+	12412826	12412826	8553170	1	1547,	0,
#Deleted in new
chr8	12415079	12418090	chr8:12415079-12418090	7	-	12415079	12415079	16724991	4	963,109,200,123,	0,1627,2194,2888,
#Partially deleted in new
chr8	12421031	12425000	chr8:12421031-12425000	7	+	12421031	12421031	16724991	4	113,115,76,130,	0,1649,2773,3839,
#Partially deleted in new
chr8	12425613	12436343	chr8:12425613-12436343	3	-	12425888	12436343	789624	8	376,150,266,134,102,81,63,96,	0,2043,3019,3367,4736,6468,8438,10634,
#Partially deleted in new
chr8	12425760	12436298	chr8:12425760-12436298	1	-	12425888	12432116	789624	6	229,150,134,81,63,149,	0,1896,3220,6321,8291,10389,
#Partially deleted in new
chr8	12425894	12436343	chr8:12425894-12436343	0	-	12425894	12436343	789624	7	95,150,266,134,81,63,96,	0,1762,2738,3086,6187,8157,10353,
#Partially deleted in new
chr8	12427733	12436343	chr8:12427733-12436343	0	-	12427733	12436343	789624	5	73,134,81,63,96,	0,1247,4348,6318,8514,
#Partially deleted in new
chr8	12448012	12511278	chr8:12448012-12511278	7	-	12448012	12448012	16724991	3	626,146,157,	0,10727,63109,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	12467692	12607660	chr8:12467692-12607660	0	-	12467692	12467692	8553170	6	3486,121,136,184,217,370,	0,7724,43429,51079,113135,139598,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	12476461	12477122	chr8:12476461-12477122	3	+	12476461	12476461	8553170	1	661,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	12505000	12607664	chr8:12505000-12607664	3	-	12505000	12505000	8553170	5	4800,136,241,68,374,	0,6121,96157,96786,102290,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	12537078	12665588	chr8:12537078-12665588	0	-	12537078	12537078	789624	9	1987,217,131,241,68,236,68,700,311,	0,43749,44854,64079,64708,70212,70844,122051,128199,
#Partially deleted in new
chr8	12570349	12571130	chr8:12570349-12571130	7	-	12570349	12570349	16724991	1	781,	0,
#Partially deleted in new
chr8	12580286	12581063	chr8:12580286-12581063	7	+	12580286	12580286	16724991	2	108,78,	0,699,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	12594969	12665514	chr8:12594969-12665514	0	-	12594969	12594969	8553170	6	327,197,241,68,700,237,	0,1048,6188,6817,64160,70308,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	12594984	12605726	chr8:12594984-12605726	0	-	12594984	12594984	8553170	6	312,241,68,177,84,132,	0,6173,6802,9946,10407,10610,
#Partially deleted in new
chr8	12601157	12601376	chr8:12601157-12601376	7	-	12601157	12601157	16724991	1	219,	0,
#Partially deleted in new
chr8	12607290	12607509	chr8:12607290-12607509	7	-	12607290	12607290	16724991	1	219,	0,
#Partially deleted in new
chr8	12626391	12659651	chr8:12626391-12659651	0	-	12626391	12626391	8553170	2	179,522,	0,32738,
#Partially deleted in new
chr8	12628475	12629256	chr8:12628475-12629256	7	-	12628475	12628475	16724991	1	781,	0,
#Deleted in new
chr8	12638427	12638602	chr8:12638427-12638602	7	+	12638427	12638427	16724991	1	175,	0,
#Deleted in new
chr8	12659129	12659348	chr8:12659129-12659348	7	-	12659129	12659129	16724991	1	219,	0,
#Deleted in new
chr8	12665277	12665495	chr8:12665277-12665495	7	-	12665277	12665277	16724991	1	218,	0,
#Deleted in new
chr8	12676034	12676389	chr8:12676034-12676389	7	-	12676034	12676034	16724991	1	355,	0,
#Deleted in new
chr8	12684153	12685153	chr8:12684153-12685153	7	-	12684153	12684153	16724991	1	1000,	0,
#Partially deleted in new
chr8	12696306	12697273	chr8:12696306-12697273	7	-	12696306	12696306	16724991	1	967,	0,
#Partially deleted in new
chr8	12703065	12704056	chr8:12703065-12704056	7	-	12703065	12703065	16724991	1	991,	0,
#Deleted in new
chr8	12719131	12719190	chr8:12719131-12719190	3	+	12719131	12719131	5263520	1	59,	0,
#Partially deleted in new
chr8	12721893	12755490	chr8:12721893-12755490	3	-	12723095	12755420	789624	12	1361,153,163,159,122,115,97,241,150,123,119,791,	0,3833,7007,7280,9842,13392,14807,15006,16101,18980,21270,32806,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	12721905	12743243	chr8:12721905-12743243	0	-	12737091	12738036	789624	12	1349,153,163,159,122,115,97,241,89,150,123,80,	0,3821,6995,7268,9830,13380,14795,14994,15366,16089,18968,21258,
#Partially deleted in new
chr8	12722757	12725998	chr8:12722757-12725998	0	-	12722757	12722757	8553170	2	497,272,	0,2969,
#Partially deleted in new
chr8	12722943	12729387	chr8:12722943-12729387	1	-	12723095	12729298	789624	4	311,153,163,214,	0,2783,5957,6230,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	12722970	12754342	chr8:12722970-12754342	1	-	12723095	12738036	789624	12	284,153,163,159,122,115,97,241,150,123,119,1317,	0,2756,5930,6203,8765,12315,13730,13929,15024,17903,20193,30055,
#Partially deleted in new
chr8	12722980	12737095	chr8:12722980-12737095	0	-	12723095	12737095	789624	8	274,153,163,159,122,115,64,196,	0,2746,5920,6193,8755,12305,13720,13919,
#Deleted in new
chr8	12727231	12727304	chr8:12727231-12727304	3	-	12727231	12727231	5263520	1	73,	0,
#Deleted in new
chr8	12727236	12727299	chr8:12727236-12727299	3	+	12727236	12727236	5263520	1	63,	0,
#Partially deleted in new
chr8	12729173	12735626	chr8:12729173-12735626	0	-	12729173	12729173	8553170	3	159,122,341,	0,2562,6112,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	12736698	12738766	chr8:12736698-12738766	0	-	12737091	12738036	789624	5	66,241,89,150,133,	0,201,573,1296,1935,
#Partially deleted in new
chr8	12738028	12756073	chr8:12738028-12756073	0	-	12738028	12738028	8553170	4	116,123,119,150,	0,2845,5135,17895,
#Partially deleted in new
chr8	12765848	12811478	chr8:12765848-12811478	3	-	12765848	12765848	789624	5	747,185,103,113,99,	0,1881,12405,22483,45531,
#Partially deleted in new
chr8	12766061	12788456	chr8:12766061-12788456	0	-	12766061	12766061	789624	3	534,103,125,	0,12192,22270,
#Partially deleted in new
chr8	12794242	12818291	chr8:12794242-12818291	3	+	12794242	12794242	789624	2	175,329,	0,23720,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	12945641	13031503	chr8:12945641-13031503	1	+	13006202	13031440	789624	6	20,110,198,155,110,390,	0,215,45192,60560,67042,85472,
#Partially deleted in new
chr8	12945673	12990939	chr8:12945673-12990939	0	+	12945673	12945673	8553170	3	293,154,106,	0,24323,45160,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	12945676	13029777	chr8:12945676-13029777	3	+	13006202	13022044	789624	5	290,198,155,174,8770,	0,45157,60525,67007,75331,
#Partially deleted in new
chr8	12951328	13006233	chr8:12951328-13006233	0	+	12951328	12951328	8553170	4	53,296,198,32,	0,734,39505,54873,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	12951331	13007670	chr8:12951331-13007670	1	+	13006202	13006385	789624	4	50,296,167,1469,	0,731,39502,54870,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	12951634	13007671	chr8:12951634-13007671	1	+	13006202	13006385	789624	3	724,198,1470,	0,39199,54567,
#Partially deleted in new
chr8	12952021	13012692	chr8:12952021-13012692	0	+	13006202	13012692	789624	4	337,167,155,9,	0,38812,54180,60662,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	12958386	12962200	chr8:12958386-12962200	7	+	12958386	12958386	16724991	3	391,553,474,	0,1542,3340,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	13010261	13021233	chr8:13010261-13021233	0	+	13010261	13010261	8553170	2	2532,226,	0,10746,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	13012012	13026165	chr8:13012012-13026165	0	+	13012012	13012012	8553170	2	845,5158,	0,8995,
#Partially deleted in new
chr8	13083360	13514886	chr8:13083360-13514886	3	-	13085810	13500071	0	18	2571,174,218,219,115,214,199,160,177,1424,64,82,72,34,141,150,1148,285,	0,2929,5126,6891,7957,9251,11398,11725,15038,15986,19429,27381,32225,221908,310192,318109,415688,431241,
#Partially deleted in new
chr8	13085188	13133474	chr8:13085188-13133474	1	-	13085810	13132980	0	14	743,174,218,219,115,214,199,160,177,1424,64,82,72,531,	0,1101,3298,5063,6129,7423,9570,9897,13210,14158,17601,25553,30397,47755,
#Partially deleted in new
chr8	13085554	13096037	chr8:13085554-13096037	0	-	13085554	13085554	8553170	9	377,174,218,219,115,214,199,160,352,	0,735,2932,4697,5763,7057,9204,9531,10131,
#Partially deleted in new
chr8	13085576	13276546	chr8:13085576-13276546	1	-	13085810	13276400	0	14	355,174,218,219,115,214,199,160,177,1424,64,82,72,285,	0,713,2910,4675,5741,7035,9182,9509,12822,13770,17213,25165,30009,190685,
#Partially deleted in new
chr8	13085592	13116244	chr8:13085592-13116244	1	-	13085810	13102822	0	14	339,174,218,219,115,214,199,160,177,1424,64,82,72,99,	0,697,2894,4659,5725,7019,9166,9493,12806,13754,17197,25149,29993,30553,
#Partially deleted in new
chr8	13086231	13088739	chr8:13086231-13088739	0	-	13086231	13086231	8553170	2	232,253,	0,2255,
#Deleted in new
chr8	13094822	13096078	chr8:13094822-13096078	0	-	13094822	13094822	8553170	3	135,160,625,	0,263,631,
#Partially deleted in new
chr8	13094928	13100905	chr8:13094928-13100905	0	-	13094928	13094928	8553170	4	29,160,177,1559,	0,157,3470,4418,
#Partially deleted in new
chr8	13100559	13276784	chr8:13100559-13276784	0	-	13100559	13100559	8553170	4	211,82,72,90,	0,10182,15026,176135,
#Partially deleted in new
chr8	13100605	13276873	chr8:13100605-13276873	0	-	13100605	13100751	789624	5	165,64,82,72,179,	0,2184,10136,14980,176089,
#Partially deleted in new
chr8	13100688	13133289	chr8:13100688-13133289	0	-	13100688	13100688	8553170	4	82,82,72,346,	0,10053,14897,32255,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	13160177	13160279	chr8:13160177-13160279	3	+	13160177	13160177	8553170	1	102,	0,
#Partially deleted in new
chr8	13214266	13276310	chr8:13214266-13276310	0	-	13214266	13214266	8553170	2	511,49,	0,61995,
#Partially deleted in new
chr8	13214574	13514765	chr8:13214574-13514765	1	-	13214625	13500071	0	6	200,34,141,150,1148,164,	0,90694,178978,186895,284474,300027,
#Partially deleted in new
chr8	13304576	13514887	chr8:13304576-13514887	1	-	13305224	13500071	0	5	726,141,150,1148,286,	0,88976,96893,194472,210025,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	13338573	13342754	chr8:13338573-13342754	3	+	13338573	13338573	8553170	2	180,3308,	0,873,
#Deleted in new
chr8	13353400	13353530	chr8:13353400-13353530	7	-	13353400	13353400	16724991	1	130,	0,
#Deleted in new
chr8	13498858	13499241	chr8:13498858-13499241	0	-	13499015	13499241	789624	1	383,	0,
#Partially deleted in new
chr8	13499704	13604606	chr8:13499704-13604606	0	-	13499704	13500071	789624	2	492,70,	0,104832,
#Partially deleted in new
chr8	13499821	13515658	chr8:13499821-13515658	0	-	13499821	13499821	8553170	2	375,200,	0,15637,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	13536028	13536135	chr8:13536028-13536135	7	+	13536028	13536028	16724991	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	13557656	13604610	chr8:13557656-13604610	0	-	13557656	13557656	8553170	2	1732,74,	0,46880,
#Deleted in new
chr8	13566842	13568287	chr8:13566842-13568287	3	+	13566991	13567951	789624	1	1445,	0,
#Deleted in new
chr8	13583888	13584533	chr8:13583888-13584533	7	-	13583888	13583888	16724991	1	645,	0,
#Partially deleted in new
chr8	13695573	13705506	chr8:13695573-13705506	7	+	13695573	13695573	16724991	2	48,222,	0,9711,
#Deleted in new
chr8	13741808	13742781	chr8:13741808-13742781	7	+	13741808	13741808	16724991	1	973,	0,
#Partially deleted in new
chr8	13844100	13849109	chr8:13844100-13849109	3	-	13844100	13844100	8553170	2	374,215,	0,4794,
#Deleted in new
chr8	13909230	13909780	chr8:13909230-13909780	7	-	13909230	13909230	16724991	1	550,	0,
#Deleted in new
chr8	14022686	14023422	chr8:14022686-14023422	7	-	14022686	14022686	16724991	1	736,	0,
#Partially deleted in new
chr8	14089863	15238339	chr8:14089863-15238339	3	-	14090442	15237623	789624	8	774,124,73,123,88,102,195,755,	0,12512,18299,74716,147728,234239,464868,1147721,
#Partially deleted in new
chr8	14090373	14554926	chr8:14090373-14554926	1	-	14090442	14554926	789624	6	264,124,73,123,88,195,	0,12002,17789,74206,147218,464358,
#Partially deleted in new
chr8	14161296	14165359	chr8:14161296-14165359	3	+	14161296	14161296	8553170	3	54,87,347,	0,1286,3716,
#Deleted in new
chr8	14309032	14309672	chr8:14309032-14309672	7	+	14309032	14309032	16724991	1	640,	0,
#Deleted in new
chr8	14319454	14319516	chr8:14319454-14319516	3	+	14319454	14319454	8553170	1	62,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	14332554	14332663	chr8:14332554-14332663	3	+	14332554	14332554	8553170	1	109,	0,
#Deleted in new
chr8	14487775	14487879	chr8:14487775-14487879	3	-	14487775	14487775	8553170	1	104,	0,
#Deleted in new
chr8	14690381	14690619	chr8:14690381-14690619	7	+	14690381	14690381	16724991	1	238,	0,
#Deleted in new
chr8	14853437	14853510	chr8:14853437-14853510	3	-	14853437	14853437	5263520	1	73,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	14879056	14879819	chr8:14879056-14879819	3	-	14879056	14879056	8553170	2	244,68,	0,695,
#Deleted in new
chr8	15325295	15325569	chr8:15325295-15325569	7	+	15325295	15325295	16724991	1	274,	0,
#Partially deleted in new
chr8	15540222	15766649	chr8:15540222-15766649	1	+	15540430	15764218	0	10	346,170,118,141,141,90,64,75,91,2447,	0,82857,110474,119284,121933,133524,190443,203315,208152,223980,
#Partially deleted in new
chr8	15540226	15764661	chr8:15540226-15764661	0	+	15540430	15743570	789624	9	342,170,118,141,141,90,75,91,459,	0,82853,110470,119280,121929,133520,203311,208148,223976,
#Partially deleted in new
chr8	15540232	15764613	chr8:15540232-15764613	1	+	15540430	15764210	789624	9	336,170,118,141,141,90,64,75,411,	0,82847,110464,119274,121923,133514,190433,203305,223970,
#Partially deleted in new
chr8	15540278	15764629	chr8:15540278-15764629	0	+	15540430	15743570	789624	8	290,170,118,141,141,90,75,427,	0,82801,110418,119228,121877,133468,203259,223924,
#Partially deleted in new
chr8	15540280	15733645	chr8:15540280-15733645	1	+	15540430	15733399	789624	8	288,170,118,141,141,90,64,254,	0,82799,110416,119226,121875,133466,190385,193111,
#Partially deleted in new
chr8	15540282	15764459	chr8:15540282-15764459	3	+	15540430	15757809	0	11	286,170,118,141,141,90,64,75,91,65,257,	0,82797,110414,119224,121873,133464,190383,203255,208092,217508,223920,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	15623077	15651017	chr8:15623077-15651017	0	+	15623077	15623077	8553170	2	172,321,	0,27619,
#Partially deleted in new
chr8	15623079	15758277	chr8:15623079-15758277	0	+	15623079	15757809	789624	10	170,118,141,141,90,64,75,91,69,244,	0,27617,36427,39076,50667,107586,120458,125295,134711,134954,
#Partially deleted in new
chr8	15673762	15764418	chr8:15673762-15764418	0	+	15673762	15673762	8553170	3	74,167,216,	0,69683,90440,
#Deleted in new
chr8	15688913	15689562	chr8:15688913-15689562	7	-	15688913	15688913	16724991	1	649,	0,
#Partially deleted in new
chr8	15743443	15758277	chr8:15743443-15758277	0	+	15743443	15743443	8553170	4	169,91,65,248,	0,4931,14347,14586,
#Partially deleted in new
chr8	15743529	15748846	chr8:15743529-15748846	0	+	15743529	15743529	8553170	2	83,472,	0,4845,
#Deleted in new
chr8	15806148	15807283	chr8:15806148-15807283	7	-	15806148	15806148	16724991	1	1135,	0,
#Deleted in new
chr8	15943126	15943532	chr8:15943126-15943532	7	+	15943126	15943126	16724991	1	406,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	15973314	16000324	chr8:15973314-16000324	3	+	15973314	15973314	8553170	3	116,100,173,	0,20227,26837,
#Partially deleted in new
chr8	16107877	16192791	chr8:16107877-16192791	1	-	16110084	16177988	789624	9	2341,54,81,81,187,413,114,107,194,	0,35680,42353,47186,56187,60580,67309,70008,84720,
#Partially deleted in new
chr8	16109430	16192715	chr8:16109430-16192715	3	-	16110084	16177988	789624	10	788,189,54,81,81,187,413,114,107,118,	0,10987,34127,40800,45633,54634,59027,65756,68455,83167,
#Partially deleted in new
chr8	16110045	16186272	chr8:16110045-16186272	1	-	16110084	16186208	789624	10	173,189,54,81,81,187,413,114,107,114,	0,10372,33512,40185,45018,54019,58412,65141,67840,76113,
#Partially deleted in new
chr8	16110084	16177988	chr8:16110084-16177988	1	-	16110084	16177988	789624	8	134,54,81,81,187,413,114,103,	0,33473,40146,44979,53980,58373,65102,67801,
#Partially deleted in new
chr8	16120888	16164251	chr8:16120888-16164251	0	-	16121133	16164251	789624	5	292,54,81,81,187,	0,22669,29342,34175,43176,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	16139318	16192659	chr8:16139318-16192659	1	-	16141001	16177988	789624	9	1727,54,81,81,187,413,114,107,62,	0,4239,10912,15745,24746,29139,35868,38567,53279,
#Partially deleted in new
chr8	16140654	16192651	chr8:16140654-16192651	0	-	16164240	16177988	789624	7	445,54,81,81,187,107,54,	0,2903,9576,14409,23410,37231,51943,
#Partially deleted in new
chr8	16175262	16567362	chr8:16175262-16567362	0	-	16175262	16265201	789624	6	38,107,159,49,64,113,	0,2623,89910,208016,336584,391987,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	16250397	16511916	chr8:16250397-16511916	0	-	16250397	16250397	8553170	5	95,167,159,49,70,	0,5846,14775,132881,261449,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	16256330	16567420	chr8:16256330-16567420	0	-	16256330	16256330	8553170	6	80,159,154,111,64,29,	0,8842,239462,241543,255516,311061,
#Partially deleted in new
chr8	16275680	16276296	chr8:16275680-16276296	7	+	16275680	16275680	16724991	1	616,	0,
#Partially deleted in new
chr8	16368085	16383328	chr8:16368085-16383328	0	-	16368085	16368085	8553170	2	353,50,	0,15193,
#Partially deleted in new
chr8	16374617	16375082	chr8:16374617-16375082	7	+	16374617	16374617	16724991	1	465,	0,
#Partially deleted in new
chr8	16467751	16495880	chr8:16467751-16495880	0	-	16467751	16467751	8553170	2	285,88,	0,28041,
#Partially deleted in new
chr8	16467763	16567490	chr8:16467763-16567490	0	-	16467763	16467763	8553170	4	273,64,53,99,	0,44083,97771,99628,
#Partially deleted in new
chr8	16598757	16693235	chr8:16598757-16693235	1	-	16598757	16598757	8553170	9	163,123,165,213,158,73,155,160,27,	0,56258,63777,66790,78159,78545,78749,86939,94451,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	16604254	16664879	chr8:16604254-16664879	3	+	16604254	16604254	8553170	3	288,113,57,	0,57685,60568,
#Partially deleted in new
chr8	16676904	16915044	chr8:16676904-16915044	3	-	16676904	16676904	8553170	4	170,95,151,127,	0,106283,167200,238013,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	16686936	16690962	chr8:16686936-16690962	0	-	16686936	16686936	8553170	2	104,166,	0,3860,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	16863195	16863496	chr8:16863195-16863496	3	-	16863195	16863195	8553170	1	301,	0,
#Partially deleted in new
chr8	16992168	17002181	chr8:16992168-17002181	3	-	16993071	17002032	0	3	1149,104,435,	0,3486,9578,
#Partially deleted in new
chr8	16992977	17001840	chr8:16992977-17001840	0	-	16993071	17001840	789624	2	340,94,	0,8769,
#Partially deleted in new
chr8	17027237	17122644	chr8:17027237-17122644	3	+	17027279	17118775	789624	15	423,154,32,79,48,83,72,39,96,101,172,109,158,69,2357,	0,36846,42450,50545,54455,57998,59726,63308,71220,77153,78175,86855,89205,91469,93050,
#Partially deleted in new
chr8	17027577	17077861	chr8:17027577-17077861	0	+	17027577	17027577	8553170	3	83,154,79,	0,36506,50205,
#Partially deleted in new
chr8	17064129	17120290	chr8:17064129-17120290	0	+	17064129	17118775	789624	13	108,32,79,48,83,72,96,101,172,109,158,69,3,	0,5558,13653,17563,21106,22834,34328,40261,41283,49963,52313,54577,56158,
#Partially deleted in new
chr8	17064184	17081967	chr8:17064184-17081967	0	+	17064184	17081829	789624	4	53,32,79,275,	0,5503,13598,17508,
#Partially deleted in new
chr8	17064213	17090684	chr8:17064213-17090684	0	+	17064213	17064213	8553170	7	24,32,79,48,83,72,139,	0,5474,13569,17479,21022,22750,26332,
#Partially deleted in new
chr8	17102442	17105583	chr8:17102442-17105583	0	+	17102442	17102442	8553170	3	287,101,171,	0,1948,2970,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	17131180	17149789	chr8:17131180-17149789	3	+	17131180	17131180	8553170	3	1889,118,285,	0,2963,18324,
#Deleted in new
chr8	17150300	17150888	chr8:17150300-17150888	7	-	17150300	17150300	16724991	1	588,	0,
#Partially deleted in new
chr8	17156028	17224799	chr8:17156028-17224799	3	+	17156723	17217212	789624	13	825,27,95,121,70,33,121,133,127,93,113,75,4544,	0,28760,30302,39475,41553,42352,49626,51931,53903,54359,59208,61143,64227,
#Partially deleted in new
chr8	17157433	17184815	chr8:17157433-17184815	0	+	17184793	17184815	789624	2	140,27,	0,27355,
#Partially deleted in new
chr8	17162798	17205704	chr8:17162798-17205704	0	+	17184793	17205704	789624	7	91,27,95,121,70,33,50,	0,21990,23532,32705,34783,35582,42856,
#Deleted in new
chr8	17208012	17210185	chr8:17208012-17210185	0	+	17208012	17208012	8553170	2	80,254,	0,1919,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	17224963	17246878	chr8:17224963-17246878	3	-	17230719	17245152	0	7	5885,111,145,162,194,212,204,	0,7463,9752,12248,18028,20072,21711,
#Partially deleted in new
chr8	17230567	17234860	chr8:17230567-17234860	0	-	17230719	17234860	789624	2	281,145,	0,4148,
#Partially deleted in new
chr8	17231569	17246878	chr8:17231569-17246878	1	-	17232420	17245152	0	6	968,145,162,194,212,204,	0,3146,5642,11422,13466,15105,
#Partially deleted in new
chr8	17232328	17246857	chr8:17232328-17246857	0	-	17243506	17245152	789624	7	209,145,162,194,104,212,183,	0,2387,4883,10663,11113,12707,14346,
#Partially deleted in new
chr8	17234592	17245091	chr8:17234592-17245091	0	-	17234646	17245091	789624	4	268,162,194,56,	0,2619,8399,10443,
#Deleted in new
chr8	17234800	17237595	chr8:17234800-17237595	0	-	17234800	17234800	8553170	2	60,384,	0,2411,
#Partially deleted in new
chr8	17237241	17246609	chr8:17237241-17246609	0	-	17237241	17245152	789624	5	132,194,212,75,87,	0,5750,7794,8615,9281,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	17241293	17245052	chr8:17241293-17245052	0	-	17241293	17241293	8553170	2	1892,17,	0,3742,
#Partially deleted in new
chr8	17242993	17246857	chr8:17242993-17246857	0	-	17243550	17245152	789624	4	192,181,212,183,	0,448,2042,3681,
#Partially deleted in new
chr8	17243180	17246448	chr8:17243180-17246448	0	-	17243180	17245152	789624	4	5,212,75,276,	0,1855,2676,2992,
#Partially deleted in new
chr8	17243506	17246855	chr8:17243506-17246855	1	-	17243506	17245152	789624	3	39,212,181,	0,1529,3168,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	17244326	17246572	chr8:17244326-17246572	0	-	17244326	17244326	8553170	3	215,212,50,	0,709,2196,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	17244739	17246865	chr8:17244739-17246865	0	-	17244739	17244739	8553170	2	508,191,	0,1935,
#Partially deleted in new
chr8	17246570	17298024	chr8:17246570-17298024	3	+	17247244	17286427	789624	12	799,75,115,101,226,71,128,59,69,144,81,3038,	0,19336,21687,22285,28162,29826,33457,33668,33804,37902,39776,48416,
#Partially deleted in new
chr8	17246930	17268273	chr8:17246930-17268273	0	+	17247244	17265807	789624	4	439,45,75,16,	0,18840,18976,21327,
#Partially deleted in new
chr8	17246933	17295277	chr8:17246933-17295277	0	+	17247244	17279962	789624	12	436,75,115,101,226,71,434,59,69,144,81,291,	0,18973,21324,21922,27799,29463,32788,33305,33441,37539,39413,48053,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	17247093	17297587	chr8:17247093-17297587	0	+	17247244	17274846	789624	12	276,75,115,101,71,183,71,128,205,144,81,2601,	0,18813,21164,21762,24899,27682,29303,32934,33145,37379,39253,47893,
#Partially deleted in new
chr8	17247122	17295052	chr8:17247122-17295052	1	+	17247244	17286427	789624	11	247,115,101,226,71,128,59,69,144,81,66,	0,21135,21733,27610,29274,32905,33116,33252,37350,39224,47864,
#Deleted in new
chr8	17247243	17248007	chr8:17247243-17248007	1	+	17247244	17247760	789624	2	126,353,	0,411,
#Partially deleted in new
chr8	17276435	17286611	chr8:17276435-17286611	0	+	17276435	17286427	789624	6	32,128,59,69,144,265,	0,3592,3803,3939,8037,9911,
#Deleted in new
chr8	17295963	17300131	chr8:17295963-17300131	0	+	17295963	17295963	8553170	3	449,92,277,	0,2103,3891,
#Deleted in new
chr8	17296460	17300282	chr8:17296460-17300282	0	+	17296460	17296460	8553170	3	107,92,428,	0,1606,3394,
#Partially deleted in new
chr8	17298029	17413327	chr8:17298029-17413327	3	-	17299861	17413292	789624	14	2195,127,141,201,50,126,110,133,135,129,158,163,123,59,	0,4124,6349,7727,11247,13481,15262,33120,43333,50923,63087,73007,75088,115239,
#Partially deleted in new
chr8	17298106	17302427	chr8:17298106-17302427	0	+	17298106	17298106	8553170	2	52,214,	0,4107,
#Partially deleted in new
chr8	17301650	17413327	chr8:17301650-17413327	1	-	17302105	17413292	789624	13	630,141,201,50,126,110,133,135,129,158,163,123,59,	0,2728,4106,7626,9860,11641,29499,39712,47302,59466,69386,71467,111618,
#Partially deleted in new
chr8	17302201	17311673	chr8:17302201-17311673	0	-	17302201	17302201	8553170	4	79,141,201,163,	0,2177,3555,9309,
#Partially deleted in new
chr8	17304438	17311863	chr8:17304438-17311863	0	-	17304438	17304438	8553170	5	81,201,50,126,111,	0,1318,4838,7072,7314,
#Partially deleted in new
chr8	17313384	17413307	chr8:17313384-17413307	0	-	17349073	17413292	789624	7	17,133,135,129,163,123,39,	0,17765,27978,35568,57652,59733,99884,
#Partially deleted in new
chr8	17326316	17349057	chr8:17326316-17349057	0	-	17326316	17326316	8553170	4	197,133,135,105,	0,4833,15046,22636,
#Partially deleted in new
chr8	17331199	17349237	chr8:17331199-17349237	0	-	17331199	17331199	8553170	5	83,135,146,129,69,	0,10163,14814,17753,17969,
#Partially deleted in new
chr8	17338729	17349485	chr8:17338729-17349485	0	-	17338729	17338729	8553170	4	262,135,129,193,	0,2633,10223,10563,
#Partially deleted in new
chr8	17372994	17413528	chr8:17372994-17413528	0	-	17372994	17372994	8553170	2	246,260,	0,40274,
#Deleted in new
chr8	17469517	17471618	chr8:17469517-17471618	7	+	17469517	17469517	16724991	1	2101,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr8	17497087	17570573	chr8:17497087-17570573	1	+	17543339	17565146	789624	13	150,46,398,156,166,134,223,140,103,206,167,109,5624,	0,5169,46230,47363,51590,53213,54676,57472,61207,63240,64856,66515,67862,
#Partially deleted in new
chr8	17497090	17565274	chr8:17497090-17565274	1	+	17543339	17565146	789624	12	147,398,156,166,134,223,140,103,206,167,109,325,	0,46227,47360,51587,53210,54673,57469,61204,63237,64853,66512,67859,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr8	17497214	17570573	chr8:17497214-17570573	3	+	17538824	17565146	789624	14	23,46,146,398,156,166,134,223,137,103,206,167,109,5624,	0,5042,41562,46103,47236,51463,53086,54549,57731,61080,63113,64729,66388,67735,
#Deleted in new
chr8	17498646	17499238	chr8:17498646-17499238	3	-	17498646	17498646	8553170	1	592,	0,
#Deleted in new
chr8	17498736	17499157	chr8:17498736-17499157	3	+	17498736	17498736	8553170	1	421,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	17500011	17500605	chr8:17500011-17500605	3	+	17500011	17500011	8553170	1	594,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	17510612	17511300	chr8:17510612-17511300	3	+	17510612	17510612	8553170	1	688,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	17538776	17570561	chr8:17538776-17570561	1	+	17538824	17565146	789624	12	146,398,156,166,134,223,140,103,206,167,109,5612,	0,4541,5674,9901,11524,12987,15783,19518,21551,23167,24826,26173,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	17538776	17570561	chr8:17538776-17570561	1	+	17538824	17565146	789624	12	146,398,156,166,134,223,137,103,206,167,109,5612,	0,4541,5674,9901,11524,12987,16169,19518,21551,23167,24826,26173,
#Partially deleted in new
chr8	17538869	17565162	chr8:17538869-17565162	0	+	17538869	17565146	789624	12	53,398,156,166,134,223,140,103,206,167,109,213,	0,4448,5581,9808,11431,12894,15690,19425,21458,23074,24733,26080,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	17576432	17643133	chr8:17576432-17643133	1	+	17577252	17642801	789624	7	324,172,298,152,294,140,521,	0,703,13035,44618,52054,57641,66180,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	17576432	17643133	chr8:17576432-17643133	3	+	17577252	17642801	789624	7	328,172,298,152,294,140,521,	0,703,13035,44618,52054,57641,66180,
#Deleted in new
chr8	17596311	17596378	chr8:17596311-17596378	7	-	17596311	17596311	16724991	1	67,	0,
#Partially deleted in new
chr8	17634070	17644071	chr8:17634070-17644071	0	+	17634070	17634070	8553170	2	143,501,	0,9500,
#Partially deleted in new
chr8	17643794	17800917	chr8:17643794-17800917	1	-	17645925	17755807	789624	14	2345,98,117,96,74,106,203,67,215,39,135,196,2245,320,	0,3187,6051,9391,9630,10766,12068,31391,40533,69419,71972,99809,109922,156803,
#Partially deleted in new
chr8	17643794	17722575	chr8:17643794-17722575	1	-	17645925	17715785	789624	12	2345,98,117,96,74,106,203,67,215,39,135,155,	0,3187,6051,9391,9630,10766,12068,31391,40533,69419,71972,78626,
#Partially deleted in new
chr8	17643798	17697670	chr8:17643798-17697670	1	-	17645925	17697377	789624	10	2341,98,117,96,74,106,203,67,215,414,	0,3183,6047,9387,9626,10762,12064,31387,40529,53458,
#Partially deleted in new
chr8	17643798	17676414	chr8:17643798-17676414	0	-	17643798	17643798	8553170	8	2341,98,117,96,1242,203,67,139,	0,3183,6047,9387,9626,12064,31387,32477,
#Partially deleted in new
chr8	17643798	17755011	chr8:17643798-17755011	0	-	17724136	17755011	789624	15	2341,98,117,96,74,106,203,67,215,39,135,162,61,196,1295,	0,3183,6047,9387,9626,10762,12064,31387,40529,69415,71968,79873,80303,99805,109918,
#Partially deleted in new
chr8	17643803	17800668	chr8:17643803-17800668	1	-	17645925	17755807	789624	15	2336,98,117,96,74,106,203,67,215,39,135,162,196,2245,71,	0,3178,6042,9382,9621,10757,12059,31382,40524,69410,71963,79868,99800,109913,156794,
#Partially deleted in new
chr8	17643803	17722221	chr8:17643803-17722221	3	-	17645925	17721901	789624	12	2336,98,117,96,74,106,203,67,215,39,135,510,	0,3178,6042,9382,9621,10757,12059,31382,40524,69410,71963,77908,
#Partially deleted in new
chr8	17645661	17755981	chr8:17645661-17755981	1	-	17645925	17755807	789624	13	478,98,117,96,74,106,203,67,215,39,135,196,2265,	0,1320,4184,7524,7763,8899,10201,29524,38666,67552,70105,97942,108055,
#Partially deleted in new
chr8	17645868	17647278	chr8:17645868-17647278	0	-	17645868	17645868	8553170	2	271,297,	0,1113,
#Partially deleted in new
chr8	17645925	17676493	chr8:17645925-17676493	1	-	17645925	17676329	789624	9	214,98,117,96,74,106,203,67,218,	0,1056,3920,7260,7499,8635,9937,29260,30350,
#Partially deleted in new
chr8	17645975	17651764	chr8:17645975-17651764	0	-	17645975	17645975	8553170	4	164,98,117,162,	0,1006,3870,5627,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	17647003	17655025	chr8:17647003-17655025	0	-	17647003	17647003	8553170	5	76,117,96,74,465,	0,2842,6182,6421,7557,
#Partially deleted in new
chr8	17649879	17692226	chr8:17649879-17692226	0	-	17649879	17649879	8553170	9	83,96,74,106,203,67,215,60,258,	0,3306,3545,4681,5983,25306,34448,41425,42089,
#Partially deleted in new
chr8	17654560	17675264	chr8:17654560-17675264	0	-	17654560	17654560	8553170	4	106,203,102,79,	0,1302,9419,20625,
#Partially deleted in new
chr8	17654563	17676210	chr8:17654563-17676210	0	-	17654563	17654563	8553170	4	103,203,67,202,	0,1299,20622,21445,
#Partially deleted in new
chr8	17655870	17693338	chr8:17655870-17693338	0	-	17655870	17655870	8553170	4	195,67,215,87,	0,19315,28457,37381,
#Partially deleted in new
chr8	17656018	17692217	chr8:17656018-17692217	0	-	17656018	17656018	8553170	4	47,67,215,249,	0,19167,28309,35950,
#Partially deleted in new
chr8	17656025	17722639	chr8:17656025-17722639	0	-	17656025	17656025	8553170	6	40,67,215,39,135,71,	0,19160,28302,57188,59741,66543,
#Deleted in new
chr8	17674667	17676142	chr8:17674667-17676142	0	-	17674667	17674667	8553170	3	348,67,155,	0,518,1320,
#Deleted in new
chr8	17674734	17676494	chr8:17674734-17676494	1	-	17675010	17676329	789624	3	281,67,219,	0,451,1541,
#Partially deleted in new
chr8	17674836	17692226	chr8:17674836-17692226	0	-	17674836	17674836	8553170	4	179,67,215,85,	0,349,9491,17305,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	17675216	17716590	chr8:17675216-17716590	0	-	17675216	17675216	8553170	5	36,215,39,135,118,	0,9111,37997,40550,41256,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	17681577	17681657	chr8:17681577-17681657	3	-	17681577	17681577	5263520	1	80,	0,
#Partially deleted in new
chr8	17684334	17722575	chr8:17684334-17722575	0	-	17684334	17684334	8553170	4	208,39,135,155,	0,28879,31432,38086,
#Partially deleted in new
chr8	17684353	17734247	chr8:17684353-17734247	0	-	17684353	17684353	8553170	5	189,39,135,162,45,	0,28860,31413,39318,49849,
#Partially deleted in new
chr8	17684474	17724010	chr8:17684474-17724010	0	-	17684474	17684474	8553170	4	68,39,135,339,	0,28739,31292,39197,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	17703987	17706187	chr8:17703987-17706187	3	+	17703987	17703987	8553170	2	195,540,	0,1660,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	17708766	17721989	chr8:17708766-17721989	0	-	17708766	17708766	8553170	4	202,39,135,278,	0,4447,7000,12945,
#Partially deleted in new
chr8	17723240	17800917	chr8:17723240-17800917	0	-	17723240	17723240	8553170	4	593,196,2245,320,	0,20363,30476,77357,
#Partially deleted in new
chr8	17748117	17748230	chr8:17748117-17748230	7	+	17748117	17748117	16724991	1	113,	0,
#Partially deleted in new
chr8	17755437	17780962	chr8:17755437-17780962	0	-	17755437	17755437	8553170	2	524,86,	0,25439,
#Partially deleted in new
chr8	17755620	17770581	chr8:17755620-17770581	0	-	17755620	17755620	8553170	3	341,65,153,	0,2519,14808,
#Partially deleted in new
chr8	17801344	17861069	chr8:17801344-17861069	3	+	17801344	17801344	8553170	2	398,112,	0,59613,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	17808940	17820868	chr8:17808940-17820868	3	+	17808940	17808940	8553170	3	65,91,511,	0,656,11417,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	17809210	17820625	chr8:17809210-17820625	0	+	17809210	17809210	8553170	2	477,268,	0,11147,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	17809339	17812908	chr8:17809339-17812908	1	+	17809339	17809339	8553170	2	348,1013,	0,2556,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	17864379	17910365	chr8:17864379-17910365	3	-	17864591	17885554	789624	10	372,188,89,98,160,181,80,71,247,481,	0,4168,4536,9639,9982,17619,21112,31067,31790,45505,
#Partially deleted in new
chr8	17864388	17885779	chr8:17864388-17885779	1	-	17864591	17885554	789624	7	363,188,89,98,160,181,288,	0,4159,4527,9630,9973,17610,21103,
#Partially deleted in new
chr8	17864392	17895404	chr8:17864392-17895404	1	-	17864591	17885554	789624	8	359,188,89,98,160,181,80,180,	0,4155,4523,9626,9969,17606,21099,30832,
#Partially deleted in new
chr8	17864392	17895538	chr8:17864392-17895538	1	-	17864591	17885554	789624	9	359,188,89,98,160,181,80,127,92,	0,4155,4523,9626,9969,17606,21099,27288,31054,
#Partially deleted in new
chr8	17864392	17895404	chr8:17864392-17895404	1	-	17864591	17885554	789624	9	359,188,89,98,160,181,80,127,180,	0,4155,4523,9626,9969,17606,21099,27288,30832,
#Partially deleted in new
chr8	17864392	17895538	chr8:17864392-17895538	1	-	17864591	17885554	789624	8	359,188,89,98,160,181,80,92,	0,4155,4523,9626,9969,17606,21099,31054,
#Partially deleted in new
chr8	17864583	17891809	chr8:17864583-17891809	1	-	17864591	17885554	789624	8	168,188,89,98,160,181,80,129,	0,3964,4332,9435,9778,17415,20908,27097,
#Partially deleted in new
chr8	17864657	17874665	chr8:17864657-17874665	0	-	17864657	17864657	8553170	5	94,188,89,98,304,	0,3890,4258,9361,9704,
#Partially deleted in new
chr8	17868336	17882165	chr8:17868336-17882165	0	-	17868336	17868336	8553170	5	399,89,98,160,167,	0,579,5682,6025,13662,
#Deleted in new
chr8	17882042	17882661	chr8:17882042-17882661	3	+	17882042	17882042	8553170	2	148,381,	0,238,
#Partially deleted in new
chr8	17885519	17895341	chr8:17885519-17895341	0	-	17885519	17885519	8553170	3	52,149,117,	0,6161,9705,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	17891265	17895544	chr8:17891265-17895544	0	-	17891265	17891265	8553170	2	542,98,	0,4181,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	17905755	17907887	chr8:17905755-17907887	3	+	17905755	17905755	8553170	3	100,202,332,	0,1437,1800,
#Partially deleted in new
chr8	17922839	18027968	chr8:17922839-18027968	3	+	17935610	18027662	789624	39	349,68,118,246,270,171,178,110,217,184,174,158,236,152,130,141,191,201,220,146,191,172,359,165,173,129,121,159,137,135,198,60,130,161,73,257,93,115,332,	0,1873,12749,14294,15900,16851,24346,27775,30130,32630,33764,34424,34700,37174,37475,39194,40261,41728,43159,43488,44140,46737,49489,57751,62607,63119,67019,68702,70643,83423,86707,87769,88397,88827,91124,91744,102521,102704,104797,
#Boundary problem: need 36, got 0, diff 36, mapped 0.0
chr8	17922856	18029944	chr8:17922856-18029944	1	+	17935610	18027662	789624	36	332,68,118,246,270,171,178,110,217,184,174,158,239,152,130,141,191,201,220,146,191,172,359,173,129,121,159,137,135,198,60,130,161,93,115,2308,	0,1856,12732,14277,15883,16834,24329,27758,30113,32613,33747,34407,34680,37157,37458,39177,40244,41711,43142,43471,44123,46720,49472,62590,63102,67002,68685,70626,83406,86690,87752,88380,88810,102504,102687,104780,
#Partially deleted in new
chr8	17922967	17953035	chr8:17922967-17953035	0	+	17922967	17922967	8553170	4	221,178,110,66,	0,24218,27647,30002,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	17922989	17927953	chr8:17922989-17927953	0	+	17922989	17922989	8553170	2	199,3241,	0,1723,
#Partially deleted in new
chr8	17922989	17960103	chr8:17922989-17960103	0	+	17935610	17960103	789624	15	199,68,118,246,270,171,117,178,110,217,184,174,158,236,90,	0,1723,12599,14144,15750,16701,17052,24196,27625,29980,32480,33614,34274,34550,37024,
#Partially deleted in new
chr8	17922998	17955955	chr8:17922998-17955955	1	+	17935610	17955657	789624	11	190,68,118,246,270,171,117,178,110,217,486,	0,1714,12590,14135,15741,16692,17043,24187,27616,29971,32471,
#Partially deleted in new
chr8	17923005	17937321	chr8:17923005-17937321	0	+	17923005	17923005	8553170	5	183,68,153,118,188,	0,1707,11700,12583,14128,
#Partially deleted in new
chr8	17923009	17953123	chr8:17923009-17953123	0	+	17935610	17953123	789624	8	179,118,246,270,171,178,110,154,	0,12579,14124,15730,16681,24176,27605,29960,
#Partially deleted in new
chr8	17923027	18027803	chr8:17923027-18027803	1	+	17935610	18027662	789624	39	161,68,118,246,270,171,178,110,217,184,174,158,236,152,130,141,191,201,220,146,191,172,359,165,173,129,121,135,137,135,198,60,130,161,73,257,93,115,167,	0,1685,12561,14106,15712,16663,24158,27587,29942,32442,33576,34236,34512,36986,37287,39006,40073,41540,42971,43300,43952,46549,49301,57563,62419,62931,66831,68514,70455,83235,86519,87581,88209,88639,90936,91556,102333,102516,104609,
#Partially deleted in new
chr8	17924743	18027975	chr8:17924743-18027975	1	+	17935610	18027662	8553170	35	37,118,246,270,171,178,110,217,184,174,158,239,152,130,141,191,201,220,146,191,172,359,173,129,121,159,137,135,198,60,130,161,93,115,339,	0,10845,12390,13996,14947,22442,25871,28226,30726,31860,32520,32793,35270,35571,37290,38357,39824,41255,41584,42236,44833,47585,60703,61215,65115,66798,68739,81519,84803,85865,86493,86923,100617,100800,102893,
#Partially deleted in new
chr8	17937175	17939016	chr8:17937175-17939016	0	+	17937175	17937175	8553170	2	204,178,	0,1663,
#Partially deleted in new
chr8	17957657	17962213	chr8:17957657-17962213	0	+	17957657	17957657	8553170	4	118,152,130,180,	0,2356,2657,4376,
#Partially deleted in new
chr8	17960093	17964770	chr8:17960093-17964770	0	+	17960093	17960093	8553170	4	72,130,141,203,	0,221,1940,4474,
#Partially deleted in new
chr8	17962952	17966035	chr8:17962952-17966035	0	+	17962952	17962952	8553170	3	339,201,37,	0,1615,3046,
#Partially deleted in new
chr8	17969422	17972642	chr8:17969422-17972642	0	+	17969422	17969422	8553170	2	326,314,	0,2906,
#Partially deleted in new
chr8	17972582	18027747	chr8:17972582-18027747	0	+	17972582	18027662	789624	18	105,165,57,173,129,121,159,137,135,198,60,130,161,73,257,93,115,111,	0,8008,10650,12864,13376,17276,18959,20900,33680,36964,38026,38654,39084,41381,42001,52778,52961,55054,
#Partially deleted in new
chr8	17972672	17986263	chr8:17972672-17986263	0	+	17972672	17972672	8553170	3	15,173,305,	0,12774,13286,
#Partially deleted in new
chr8	18006053	18009665	chr8:18006053-18009665	0	+	18006053	18006053	8553170	2	344,119,	0,3493,
#Partially deleted in new
chr8	18013827	18027758	chr8:18013827-18027758	0	+	18013827	18013827	8553170	5	209,257,93,115,122,	0,756,11533,11716,13809,
#Partially deleted in new
chr8	18013881	18025611	chr8:18013881-18025611	0	+	18013881	18013881	8553170	3	155,93,68,	0,11479,11662,
#Partially deleted in new
chr8	18013987	18015795	chr8:18013987-18015795	0	+	18013987	18013987	8553170	3	49,257,95,	0,596,1713,
#Partially deleted in new
chr8	18024950	18027758	chr8:18024950-18027758	0	+	18024950	18024950	8553170	3	503,115,122,	0,593,2686,
#Partially deleted in new
chr8	18055991	18084370	chr8:18055991-18084370	1	-	18057533	18084058	789624	14	1632,57,124,132,82,55,145,46,75,79,87,91,47,390,	0,2843,3349,3580,5385,5694,6287,7193,8465,11228,13800,15308,19549,27989,
#Partially deleted in new
chr8	18056415	18084370	chr8:18056415-18084370	1	-	18057533	18084058	789624	14	1208,57,124,132,82,55,145,46,75,79,87,91,47,390,	0,2419,2925,3156,4961,5270,5863,6769,8041,10804,13376,14884,19125,27565,
#Partially deleted in new
chr8	18056430	18083950	chr8:18056430-18083950	0	-	18071351	18083950	789624	13	1193,57,124,132,82,55,145,46,79,87,91,47,10,	0,2404,2910,3141,4946,5255,5848,6754,10789,13361,14869,19110,27510,
#Partially deleted in new
chr8	18056451	18084108	chr8:18056451-18084108	1	-	18057533	18084058	789624	13	1172,57,124,132,82,55,145,46,79,87,91,47,128,	0,2383,2889,3120,4925,5234,5827,6733,10768,13340,14848,19089,27529,
#Partially deleted in new
chr8	18056454	18084998	chr8:18056454-18084998	3	-	18057533	18084801	789624	14	1169,57,124,132,82,55,145,46,75,79,87,91,47,323,	0,2380,2886,3117,4922,5231,5824,6730,8002,10765,13337,14845,19086,28221,
#Deleted in new
chr8	18056455	18059163	chr8:18056455-18059163	0	-	18056455	18056455	8553170	1	2708,	0,
#Partially deleted in new
chr8	18056455	18084961	chr8:18056455-18084961	1	-	18057533	18084801	789624	13	1168,57,124,132,82,55,145,46,79,87,91,47,286,	0,2379,2885,3116,4921,5230,5823,6729,10764,13336,14844,19085,28220,
#Partially deleted in new
chr8	18056458	18083408	chr8:18056458-18083408	1	-	18057533	18071320	789624	14	1165,57,124,132,82,55,145,46,75,79,87,91,47,287,	0,2376,2882,3113,4918,5227,5820,6726,7998,10761,13333,14841,19082,26663,
#Partially deleted in new
chr8	18056458	18084073	chr8:18056458-18084073	1	-	18057533	18084058	789624	14	1165,57,124,132,82,55,145,46,12,79,87,91,47,93,	0,2376,2882,3113,4918,5227,5820,6726,7998,10761,13333,14841,19082,27522,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr8	18056461	18084091	chr8:18056461-18084091	0	-	18056461	18056461	8553170	13	1162,57,124,132,82,55,145,46,2842,87,91,47,111,	0,2373,2879,3110,4915,5224,5817,6723,7995,13330,14838,19079,27519,
#Partially deleted in new
chr8	18056461	18076037	chr8:18056461-18076037	1	-	18057533	18071320	789624	14	1162,57,124,132,82,55,145,46,75,79,87,91,47,115,	0,2373,2879,3110,4915,5224,5817,6723,7995,10758,13330,14838,19079,19461,
#Partially deleted in new
chr8	18056465	18084142	chr8:18056465-18084142	1	-	18057533	18084058	789624	14	1158,57,124,132,82,55,145,46,18,79,87,91,47,162,	0,2369,2875,3106,4911,5220,5813,6719,7991,10754,13326,14834,19075,27515,
#Partially deleted in new
chr8	18056469	18084142	chr8:18056469-18084142	0	-	18067252	18084058	789624	12	1154,57,124,132,82,55,145,46,75,79,47,162,	0,2365,2871,3102,4907,5216,5809,6715,7987,10750,19071,27511,
#Partially deleted in new
chr8	18056472	18084961	chr8:18056472-18084961	0	-	18071358	18084801	789624	14	1151,57,124,132,82,55,145,46,75,79,87,91,47,375,	0,2362,2868,3099,4904,5213,5806,6712,7984,10747,13319,14827,19068,28114,
#Partially deleted in new
chr8	18056474	18084114	chr8:18056474-18084114	0	-	18056474	18056474	8553170	12	1149,57,124,132,1047,46,75,79,87,91,47,134,	0,2360,2866,3097,4902,6710,7982,10745,13317,14825,19066,27506,
#Partially deleted in new
chr8	18056476	18084120	chr8:18056476-18084120	0	-	18071407	18084058	789624	14	1147,57,124,132,82,55,145,46,75,79,87,112,47,140,	0,2358,2864,3095,4900,5209,5802,6708,7980,10743,13315,14823,19064,27504,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	18056487	18065124	chr8:18056487-18065124	0	-	18056487	18056487	8553170	8	1136,57,124,132,82,55,145,1940,	0,2347,2853,3084,4889,5198,5791,6697,
#Partially deleted in new
chr8	18056492	18064768	chr8:18056492-18064768	0	-	18056492	18056492	8553170	10	1131,57,124,132,82,55,145,46,75,44,	0,2342,2848,3079,4884,5193,5786,6692,7964,8232,
#Partially deleted in new
chr8	18056492	18084980	chr8:18056492-18084980	0	-	18084576	18084801	789624	14	1131,57,124,132,82,55,145,46,75,79,87,91,47,1000,	0,2342,2848,3079,4884,5193,5786,6692,7964,10727,13299,14807,19048,27488,
#Partially deleted in new
chr8	18056502	18062795	chr8:18056502-18062795	0	-	18056502	18056502	8553170	6	1121,57,124,132,82,1110,	0,2332,2838,3069,4874,5183,
#Partially deleted in new
chr8	18056502	18069816	chr8:18056502-18069816	0	-	18056502	18056502	8553170	7	1121,57,124,132,1047,79,25,	0,2332,2838,3069,4874,10717,13289,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	18056537	18063847	chr8:18056537-18063847	0	-	18056537	18056537	8553170	5	1086,57,124,132,2471,	0,2297,2803,3034,4839,
#Partially deleted in new
chr8	18056545	18062348	chr8:18056545-18062348	0	-	18057533	18062348	789624	7	1078,57,124,132,73,55,70,	0,2289,2795,3026,4831,5140,5733,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	18056545	18063143	chr8:18056545-18063143	0	-	18056545	18056545	8553170	7	1078,57,124,132,82,55,865,	0,2289,2795,3026,4831,5140,5733,
#Partially deleted in new
chr8	18056570	18084096	chr8:18056570-18084096	1	-	18057533	18084058	789624	14	1053,57,124,132,82,55,145,46,15,79,87,91,47,116,	0,2264,2770,3001,4806,5115,5708,6614,7886,10649,13221,14729,18970,27410,
#Partially deleted in new
chr8	18056707	18084123	chr8:18056707-18084123	0	-	18069874	18084058	789624	14	916,57,124,132,82,55,145,46,75,79,87,60,47,143,	0,2127,2633,2864,4669,4978,5571,6477,7749,10512,13084,14623,18833,27273,
#Partially deleted in new
chr8	18056723	18084126	chr8:18056723-18084126	0	-	18069874	18084058	789624	13	900,57,124,132,82,55,145,46,75,79,87,47,146,	0,2111,2617,2848,4653,4962,5555,6461,7733,10496,13068,18817,27257,
#Partially deleted in new
chr8	18056752	18084313	chr8:18056752-18084313	1	-	18057533	18084058	789624	14	871,57,124,132,82,55,145,46,75,79,81,91,47,333,	0,2082,2588,2819,4624,4933,5526,6432,7704,10467,13039,14547,18788,27228,
#Partially deleted in new
chr8	18056770	18084971	chr8:18056770-18084971	0	-	18084576	18084801	789624	14	853,57,124,132,82,55,145,46,75,79,87,91,47,685,	0,2064,2570,2801,4606,4915,5508,6414,7686,10449,13021,14529,18770,27516,
#Partially deleted in new
chr8	18056781	18084917	chr8:18056781-18084917	0	-	18084576	18084801	789624	15	842,57,124,132,82,55,145,46,156,75,79,87,91,47,631,	0,2053,2559,2790,4595,4904,5497,6403,7341,7675,10438,13010,14518,18759,27505,
#Partially deleted in new
chr8	18056801	18084998	chr8:18056801-18084998	0	-	18084576	18084801	789624	13	822,57,124,132,82,55,145,46,79,87,91,47,537,	0,2033,2539,2770,4575,4884,5477,6383,10418,12990,14498,18739,27660,
#Partially deleted in new
chr8	18056808	18084074	chr8:18056808-18084074	1	-	18057533	18084058	789624	10	815,57,124,132,82,79,87,91,47,94,	0,2026,2532,2763,4568,10411,12983,14491,18732,27172,
#Partially deleted in new
chr8	18056834	18084067	chr8:18056834-18084067	0	-	18071351	18084058	789624	14	789,57,124,132,82,55,145,46,75,79,87,91,47,151,	0,2000,2506,2737,4542,4851,5444,6350,7622,10385,12957,14465,18706,27082,
#Partially deleted in new
chr8	18056834	18084115	chr8:18056834-18084115	0	-	18057533	18084058	789624	15	497,193,57,124,132,82,55,145,46,75,79,87,91,47,135,	0,596,2000,2506,2737,4542,4851,5444,6350,7622,10385,12957,14465,18706,27146,
#Partially deleted in new
chr8	18056834	18084120	chr8:18056834-18084120	0	-	18071351	18084058	789624	14	789,57,124,132,82,55,145,46,75,79,87,91,47,180,	0,2000,2506,2737,4542,4851,5444,6350,7622,10385,12957,14465,18706,27106,
#Partially deleted in new
chr8	18056879	18084074	chr8:18056879-18084074	0	-	18071351	18084058	789624	14	744,57,124,132,82,55,145,46,75,79,87,91,47,176,	0,1955,2461,2692,4497,4806,5399,6305,7577,10340,12912,14420,18661,27019,
#Partially deleted in new
chr8	18056902	18084100	chr8:18056902-18084100	1	-	18057533	18084058	789624	13	721,57,124,132,82,55,145,46,75,79,91,47,120,	0,1932,2438,2669,4474,4783,5376,6282,7554,10317,14397,18638,27078,
#Partially deleted in new
chr8	18056914	18084026	chr8:18056914-18084026	0	-	18057533	18084026	789624	13	709,57,124,132,82,55,145,46,75,79,87,47,86,	0,1920,2426,2657,4462,4771,5364,6270,7542,10305,12877,18626,27026,
#Partially deleted in new
chr8	18057047	18084980	chr8:18057047-18084980	1	-	18057619	18084801	789624	13	576,57,132,82,55,145,46,75,79,87,91,47,305,	0,1787,2524,4329,4638,5231,6137,7409,10172,12744,14252,18493,27628,
#Partially deleted in new
chr8	18057197	18084985	chr8:18057197-18084985	1	-	18057533	18084801	789624	14	426,57,124,132,82,55,145,46,75,79,91,21,47,310,	0,1637,2143,2374,4179,4488,5081,5987,7259,10022,14102,16058,18343,27478,
#Partially deleted in new
chr8	18059571	18084064	chr8:18059571-18084064	0	-	18059571	18084058	789624	9	132,82,55,89,79,87,91,47,84,	0,1805,2114,2707,7648,10220,11728,15969,24409,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	18059600	18061696	chr8:18059600-18061696	0	-	18059600	18059600	8553170	2	1858,11,	0,2085,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	18061389	18063624	chr8:18061389-18063624	0	-	18061389	18061389	8553170	4	69,55,176,440,	0,296,858,1795,
#Partially deleted in new
chr8	18061407	18075682	chr8:18061407-18075682	0	-	18061407	18061407	8553170	9	51,55,145,46,75,79,87,91,142,	0,278,871,1777,3049,5812,8384,9892,14133,
#Deleted in new
chr8	18061686	18062720	chr8:18061686-18062720	0	-	18061686	18061686	8553170	2	54,473,	0,561,
#Partially deleted in new
chr8	18062278	18076268	chr8:18062278-18076268	0	-	18062278	18071320	789624	8	145,46,75,79,87,91,47,92,	0,906,2178,4941,7513,9021,13262,13898,
#Partially deleted in new
chr8	18062335	18084802	chr8:18062335-18084802	0	-	18069865	18084801	789624	7	88,46,75,79,81,47,127,	0,849,2121,4884,7456,13205,22340,
#Partially deleted in new
chr8	18062339	18084080	chr8:18062339-18084080	0	-	18062339	18084058	789624	8	84,46,75,49,87,91,47,100,	0,845,2117,4910,7452,8960,13201,21641,
#Partially deleted in new
chr8	18062352	18084077	chr8:18062352-18084077	0	-	18071358	18084058	789624	8	71,46,75,79,87,91,40,97,	0,832,2104,4867,7439,8947,13188,21628,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	18062354	18082603	chr8:18062354-18082603	0	-	18062354	18071320	789624	8	69,46,75,79,87,91,47,77,	0,830,2102,4865,7437,8945,13186,20172,
#Partially deleted in new
chr8	18062393	18084079	chr8:18062393-18084079	0	-	18062393	18084058	789624	9	30,46,75,79,87,91,21,47,99,	0,791,2063,4826,7398,8906,10862,13147,21587,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	18062931	18068671	chr8:18062931-18068671	0	-	18062931	18062931	8553170	1	5740,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	18063074	18084142	chr8:18063074-18084142	0	-	18063074	18063074	8553170	5	4224,87,91,47,162,	0,6717,8225,12466,20906,
#Partially deleted in new
chr8	18064234	18084078	chr8:18064234-18084078	1	-	18064391	18084058	789624	6	297,79,87,91,47,98,	0,2985,5557,7065,11306,19746,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	18064412	18084929	chr8:18064412-18084929	0	-	18064412	18064412	8553170	5	2886,87,91,47,254,	0,5379,6887,11128,20263,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	18065895	18084077	chr8:18065895-18084077	0	-	18069874	18084058	789624	4	1403,87,47,97,	0,3896,9645,18085,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	18066576	18084844	chr8:18066576-18084844	0	-	18069874	18084801	789624	4	722,87,47,169,	0,3215,8964,18099,
#Partially deleted in new
chr8	18066762	18084073	chr8:18066762-18084073	0	-	18071351	18084058	789624	5	536,87,91,47,157,	0,3029,4537,8778,17154,
#Partially deleted in new
chr8	18066762	18084148	chr8:18066762-18084148	1	-	18067073	18084058	789624	5	536,87,91,47,168,	0,3029,4537,8778,17218,
#Partially deleted in new
chr8	18066763	18084971	chr8:18066763-18084971	1	-	18067073	18084801	789624	5	535,87,91,47,296,	0,3028,4536,8777,17912,
#Partially deleted in new
chr8	18066766	18076305	chr8:18066766-18076305	1	-	18067073	18071320	789624	5	532,87,91,47,129,	0,3025,4533,8774,9410,
#Partially deleted in new
chr8	18066889	18084817	chr8:18066889-18084817	0	-	18071351	18084801	789624	5	409,87,91,47,146,	0,2902,4410,8651,17782,
#Partially deleted in new
chr8	18066901	18083184	chr8:18066901-18083184	1	-	18067073	18071320	789624	5	397,87,91,47,63,	0,2890,4398,8639,16220,
#Partially deleted in new
chr8	18067221	18084960	chr8:18067221-18084960	0	-	18067221	18084801	789624	5	77,81,91,47,285,	0,2570,4078,8319,17454,
#Partially deleted in new
chr8	18069460	18084088	chr8:18069460-18084088	0	-	18069460	18069460	8553170	4	418,91,47,108,	0,1839,6080,14520,
#Partially deleted in new
chr8	18071308	18084802	chr8:18071308-18084802	0	-	18071308	18084801	789624	4	82,47,306,127,	0,4232,12672,13367,
#Partially deleted in new
chr8	18071326	18084851	chr8:18071326-18084851	0	-	18084576	18084801	789624	4	64,47,237,565,	0,4214,4850,12960,
#Partially deleted in new
chr8	18075584	18084944	chr8:18075584-18084944	0	-	18084282	18084801	789624	3	3,306,358,	0,8396,9002,
#Deleted in new
chr8	18075857	18076682	chr8:18075857-18076682	0	-	18075857	18075857	8553170	1	825,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	18084688	18095918	chr8:18084688-18095918	0	+	18084688	18084688	8553170	4	251,244,54,93,	0,553,2194,11137,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	18084867	18096394	chr8:18084867-18096394	3	+	18084867	18084867	789624	5	72,244,54,113,569,	0,374,2015,2157,10958,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	18084867	18088211	chr8:18084867-18088211	0	+	18084867	18084867	789624	4	72,54,113,212,	0,2015,2157,3132,
#Deleted in new
chr8	18084888	18087492	chr8:18084888-18087492	0	+	18084888	18084888	8553170	4	51,244,54,468,	0,353,1994,2136,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	18085026	18095907	chr8:18085026-18095907	0	+	18085026	18085026	8553170	3	459,54,82,	0,1856,10799,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	18088568	18089687	chr8:18088568-18089687	7	-	18088568	18088568	16724991	1	1119,	0,
#Partially deleted in new
chr8	18170476	18222754	chr8:18170476-18222754	0	+	18170476	18170476	8553170	5	31,61,175,79,713,	0,202,39304,48934,51565,
#Deleted in new
chr8	18200923	18201205	chr8:18200923-18201205	7	-	18200923	18200923	16724991	1	282,	0,
#Partially deleted in new
chr8	18210092	18223689	chr8:18210092-18223689	3	+	18222047	18222920	0	3	88,79,1648,	0,9318,11949,
#Partially deleted in new
chr8	18210108	18223688	chr8:18210108-18223688	1	+	18222047	18222920	0	4	72,150,79,1647,	0,1084,9302,11933,
#Partially deleted in new
chr8	18210129	18223689	chr8:18210129-18223689	1	+	18222047	18222920	0	4	51,384,79,1648,	0,2261,9281,11912,
#Partially deleted in new
chr8	18210133	18222098	chr8:18210133-18222098	0	+	18210133	18210133	8553170	4	47,150,79,57,	0,1059,9277,11908,
#Partially deleted in new
chr8	18211284	18222324	chr8:18211284-18222324	0	+	18211284	18211284	8553170	4	58,384,79,283,	0,1106,8126,10757,
#Partially deleted in new
chr8	18212221	18223689	chr8:18212221-18223689	1	+	18222047	18222920	0	3	553,79,1648,	0,7189,9820,
#Deleted in new
chr8	18221776	18223222	chr8:18221776-18223222	1	+	18222047	18222920	0	1	1446,	0,
#Deleted in new
chr8	18370606	18371484	chr8:18370606-18371484	7	+	18370606	18370606	16724991	1	878,	0,
#Deleted in new
chr8	18383273	18383917	chr8:18383273-18383917	7	-	18383273	18383273	16724991	1	644,	0,
#Deleted in new
chr8	18387107	18387777	chr8:18387107-18387777	7	-	18387107	18387107	16724991	1	670,	0,
#Deleted in new
chr8	18387267	18388319	chr8:18387267-18388319	3	+	18387267	18387267	8553170	2	89,255,	0,797,
#Partially deleted in new
chr8	18391244	18401218	chr8:18391244-18401218	3	+	18400003	18400876	789624	2	101,1221,	0,8753,
#Partially deleted in new
chr8	18391286	18400993	chr8:18391286-18400993	1	+	18400393	18400876	789624	2	59,657,	0,9050,
#Partially deleted in new
chr8	18527300	19013686	chr8:18527300-19013686	1	-	18535742	19013583	789624	16	8658,144,145,158,71,194,44,90,59,113,81,195,396,1108,109,124,	0,28908,45227,47827,73063,105312,128341,238148,271994,273969,277221,277403,340373,344325,408733,486262,
#Partially deleted in new
chr8	18527302	19013686	chr8:18527302-19013686	1	-	18535742	19013583	789624	16	8656,144,145,158,71,194,44,89,63,113,81,195,396,1108,109,124,	0,28906,45225,47825,73061,105310,128339,238146,271988,273967,277219,277401,340371,344323,408731,486260,
#Partially deleted in new
chr8	18530560	18684076	chr8:18530560-18684076	1	-	18535742	18683932	789624	6	5398,126,71,194,44,303,	0,25648,69803,102052,125081,153213,
#Partially deleted in new
chr8	18530709	18808876	chr8:18530709-18808876	3	-	18535742	18808786	789624	13	5249,144,145,158,71,194,44,90,59,113,81,195,122,	0,25499,41818,44418,69654,101903,124932,234739,268585,270560,273812,273994,278045,
#Partially deleted in new
chr8	18530709	18683932	chr8:18530709-18683932	1	-	18535742	18683932	789624	7	5249,123,3,71,194,44,159,	0,25499,26778,69654,101903,124932,153064,
#Partially deleted in new
chr8	18530710	18684099	chr8:18530710-18684099	1	-	18535742	18683932	789624	8	5248,144,145,158,71,194,44,326,	0,25498,41817,44417,69653,101902,124931,153063,
#Partially deleted in new
chr8	18530710	18887034	chr8:18530710-18887034	1	-	18535742	18872668	789624	15	5248,144,145,158,71,194,44,90,59,113,81,195,396,1108,99,	0,25498,41817,44417,69653,101902,124931,234738,268584,270559,273811,273993,336963,340915,356225,
#Partially deleted in new
chr8	18535636	18808832	chr8:18535636-18808832	0	-	18774914	18808786	789624	14	322,144,145,158,71,194,44,90,112,59,113,81,195,78,	0,20572,36891,39491,64727,96976,120005,229812,239190,263658,265633,268885,269067,273118,
#Partially deleted in new
chr8	18535719	18684121	chr8:18535719-18684121	0	-	18535719	18535719	8553170	4	239,144,125,225,	0,20489,36808,148177,
#Partially deleted in new
chr8	18720904	18734405	chr8:18720904-18734405	3	+	18720904	18720904	8553170	3	289,202,1563,	0,9235,11938,
#Partially deleted in new
chr8	18762884	18804829	chr8:18762884-18804829	0	-	18762998	18804829	789624	6	141,90,59,113,81,126,	0,2564,36410,38385,41637,41819,
#Partially deleted in new
chr8	18765448	18854374	chr8:18765448-18854374	0	-	18765448	18804855	789624	6	90,59,113,81,195,277,	0,33846,35821,39073,39255,88649,
#Deleted in new
chr8	18774546	18774918	chr8:18774546-18774918	7	-	18774546	18774546	16724991	1	372,	0,
#Partially deleted in new
chr8	18786775	18808863	chr8:18786775-18808863	0	-	18786775	18786775	8553170	6	59,59,113,81,195,109,	0,12519,14494,17746,17928,21979,
#Partially deleted in new
chr8	18799147	18804867	chr8:18799147-18804867	0	-	18799147	18799147	8553170	4	206,113,81,164,	0,2122,5374,5556,
#Partially deleted in new
chr8	18799297	18808867	chr8:18799297-18808867	0	-	18801370	18808786	789624	6	56,113,22,81,195,113,	0,1972,3033,5224,5406,9457,
#Partially deleted in new
chr8	18800996	18854336	chr8:18800996-18854336	0	-	18800996	18800996	8553170	4	386,81,195,239,	0,3525,3707,53101,
#Partially deleted in new
chr8	18804359	18808895	chr8:18804359-18808895	0	-	18804359	18804359	8553170	3	243,195,141,	0,344,4395,
#Deleted in new
chr8	18849257	18849707	chr8:18849257-18849707	7	+	18849257	18849257	16724991	1	450,	0,
#Deleted in new
chr8	18864680	18865247	chr8:18864680-18865247	3	-	18864680	18864680	8553170	1	567,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	18924532	18940452	chr8:18924532-18940452	0	-	18924532	18924532	8553170	3	276,109,365,	0,11501,15555,
#Partially deleted in new
chr8	18936040	19084730	chr8:18936040-19084730	0	-	18936040	19084529	789624	2	102,525,	0,148165,
#Partially deleted in new
chr8	18936052	19014460	chr8:18936052-19014460	0	-	18936052	18936052	8553170	2	86,401,	0,78007,
#Deleted in new
chr8	18979618	18979772	chr8:18979618-18979772	3	+	18979618	18979618	8553170	1	154,	0,
#Partially deleted in new
chr8	18989278	19000952	chr8:18989278-19000952	3	+	18989278	18989278	8553170	3	134,51,360,	0,10746,11314,
#Deleted in new
chr8	19001626	19001950	chr8:19001626-19001950	7	+	19001626	19001626	16724991	1	324,	0,
#Partially deleted in new
chr8	19086894	19245489	chr8:19086894-19245489	1	-	19086894	19086894	8553170	4	27,64,129,342,	0,140273,148569,158253,
#Partially deleted in new
chr8	19091732	19115024	chr8:19091732-19115024	3	+	19091732	19091732	8553170	3	156,223,140,	0,3714,23152,
#Partially deleted in new
chr8	19183673	19235677	chr8:19183673-19235677	3	-	19183673	19183673	5263520	4	355,90,64,214,	0,899,43494,51790,
#Partially deleted in new
chr8	19237736	19241912	chr8:19237736-19241912	7	+	19237736	19237736	16724991	5	991,307,250,553,196,	0,1409,2138,2927,3980,
#Partially deleted in new
chr8	19246349	19249240	chr8:19246349-19249240	3	+	19246349	19246349	8553170	2	101,78,	0,2813,
#Deleted in new
chr8	19277283	19277573	chr8:19277283-19277573	3	+	19277283	19277283	8553170	1	290,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	19313616	19396218	chr8:19313616-19396218	3	+	19319547	19394642	789624	10	207,385,160,172,81,112,211,131,224,1669,	0,5727,19338,21069,43586,47586,50455,59913,79701,80933,
#Partially deleted in new
chr8	19313695	19395027	chr8:19313695-19395027	1	+	19313777	19394642	789624	9	128,160,172,81,112,211,131,224,478,	0,19259,20990,43507,47507,50376,59834,79622,80854,
#Partially deleted in new
chr8	19313975	19394953	chr8:19313975-19394953	1	+	19319547	19394642	789624	10	104,385,160,172,81,112,211,131,224,404,	0,5368,18979,20710,43227,47227,50096,59554,79342,80574,
#Partially deleted in new
chr8	19319589	19361298	chr8:19319589-19361298	0	+	19319589	19361298	789624	4	139,160,172,96,	0,13365,15096,41613,
#Partially deleted in new
chr8	19360787	19364099	chr8:19360787-19364099	0	+	19360787	19360787	8553170	2	541,28,	0,3284,
#Partially deleted in new
chr8	19363808	19373617	chr8:19363808-19373617	0	+	19363808	19363808	8553170	2	474,88,	0,9721,
#Partially deleted in new
chr8	19375127	19375622	chr8:19375127-19375622	3	-	19375127	19375127	8553170	1	495,	0,
#Partially deleted in new
chr8	19404160	19682583	chr8:19404160-19682583	3	-	19405779	19505834	789624	10	1909,82,95,179,102,217,930,152,95,111,	0,4452,14495,16179,35669,54265,101040,181005,197610,278312,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	19404160	19682761	chr8:19404160-19682761	0	-	19457773	19505834	789624	10	1909,82,95,179,102,287,217,930,95,66,	0,4452,14495,16179,35669,53369,54265,101040,197610,278535,
#Partially deleted in new
chr8	19404160	19602495	chr8:19404160-19602495	1	-	19405779	19505834	789624	10	1909,82,95,179,102,217,930,119,95,504,	0,4452,14495,16179,35669,54265,101040,186999,197610,197831,
#Partially deleted in new
chr8	19405779	19601865	chr8:19405779-19601865	1	-	19405779	19505834	789624	8	290,82,95,179,102,217,930,95,	0,2833,12876,14560,34050,52646,99421,195991,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	19420382	19495191	chr8:19420382-19495191	0	-	19420382	19420382	8553170	5	136,102,287,217,153,	0,19447,37147,38043,74656,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	19439876	19602759	chr8:19439876-19602759	0	-	19457773	19505834	789624	6	55,287,217,930,95,768,	0,17653,18549,65324,161894,162115,
#Partially deleted in new
chr8	19505522	19757938	chr8:19505522-19757938	0	-	19505522	19505834	789624	3	608,95,89,	0,96248,252327,
#Partially deleted in new
chr8	19505544	19758029	chr8:19505544-19758029	0	-	19505544	19505834	789624	2	586,180,	0,252305,
#Partially deleted in new
chr8	19505673	19602495	chr8:19505673-19602495	0	-	19505673	19505834	789624	3	457,95,94,	0,96097,96728,
#Partially deleted in new
chr8	19505791	19757305	chr8:19505791-19757305	0	-	19505791	19505834	789624	3	339,95,120,	0,95979,251394,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	19505879	19642022	chr8:19505879-19642022	0	-	19505879	19505879	8553170	3	251,95,236,	0,95891,135907,
#Partially deleted in new
chr8	19505905	19683240	chr8:19505905-19683240	0	-	19505905	19505905	8553170	3	225,95,313,	0,95865,177022,
#Partially deleted in new
chr8	19506036	19532020	chr8:19506036-19532020	0	-	19506036	19506036	8553170	2	94,202,	0,25782,
#Partially deleted in new
chr8	19506115	19757217	chr8:19506115-19757217	0	-	19506115	19506115	8553170	5	15,152,95,111,32,	0,79050,95655,226340,251070,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	19587873	19602224	chr8:19587873-19602224	0	-	19587873	19587873	8553170	3	150,95,233,	0,13897,14118,
#Partially deleted in new
chr8	19678571	19688934	chr8:19678571-19688934	3	+	19678571	19678571	8553170	2	256,211,	0,10152,
#Partially deleted in new
chr8	19817139	19852078	chr8:19817139-19852078	3	+	19817537	19851805	789624	17	527,68,104,140,82,141,172,170,134,154,83,153,109,80,163,94,430,	0,1135,2433,3239,5299,6161,6733,7663,9286,13266,14888,16029,19912,25708,26936,28564,34509,
#Deleted in new
chr8	19817390	19819653	chr8:19817390-19819653	0	+	19817537	19818346	789624	3	276,199,81,	0,884,2182,
#Deleted in new
chr8	19817436	19820518	chr8:19817436-19820518	0	+	19817537	19818262	789624	4	230,149,104,140,	0,757,2136,2942,
#Deleted in new
chr8	19817438	19818872	chr8:19817438-19818872	0	+	19817438	19817438	8553170	2	228,598,	0,836,
#Partially deleted in new
chr8	19817449	19822520	chr8:19817449-19822520	0	+	19817449	19817449	8553170	4	217,68,104,82,	0,825,2123,4989,
#Partially deleted in new
chr8	19817580	19823452	chr8:19817580-19823452	0	+	19817580	19820388	789624	5	86,68,140,82,152,	0,694,2798,4858,5720,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	19820948	19824492	chr8:19820948-19824492	0	+	19820948	19820948	8553170	3	1572,141,620,	0,2352,2924,
#Partially deleted in new
chr8	19823387	19832110	chr8:19823387-19832110	0	+	19823387	19832110	789624	6	54,109,170,134,154,83,	0,485,1415,3038,7018,8640,
#Partially deleted in new
chr8	19823894	19826488	chr8:19823894-19826488	0	+	19823894	19823894	8553170	2	150,63,	0,2531,
#Partially deleted in new
chr8	19824663	19830526	chr8:19824663-19830526	0	+	19824663	19824663	8553170	3	309,134,121,	0,1762,5742,
#Partially deleted in new
chr8	19824837	19844237	chr8:19824837-19844237	0	+	19824837	19830419	789624	7	135,154,83,153,109,80,162,	0,5568,7190,8331,12214,18010,19238,
#Partially deleted in new
chr8	19830518	19845774	chr8:19830518-19845774	0	+	19830518	19845774	789624	5	41,83,153,109,71,	0,1509,2650,6533,15185,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	19832100	19837517	chr8:19832100-19837517	0	+	19832100	19832100	8553170	3	10,153,466,	0,1068,4951,
#Partially deleted in new
chr8	19837052	19852083	chr8:19837052-19852083	0	+	19837052	19851771	789624	3	108,80,435,	0,5795,14596,
#Partially deleted in new
chr8	19837080	19851674	chr8:19837080-19851674	0	+	19837080	19841834	789624	6	80,129,80,163,94,26,	0,4746,5767,6995,8623,14568,
#Partially deleted in new
chr8	19842898	19852061	chr8:19842898-19852061	0	+	19842898	19851805	789624	5	29,163,94,78,413,	0,1177,2805,6263,8750,
#Partially deleted in new
chr8	19844127	19852067	chr8:19844127-19852067	0	+	19844127	19845710	789624	3	111,101,419,	0,1569,7521,
#Deleted in new
chr8	19845422	19845914	chr8:19845422-19845914	0	+	19845422	19845422	8553170	1	492,	0,
#Partially deleted in new
chr8	19848762	19852035	chr8:19848762-19852035	0	+	19848762	19848762	8553170	2	477,387,	0,2886,
#Partially deleted in new
chr8	19901716	19954151	chr8:19901716-19954151	0	+	19948319	19954151	789624	5	75,161,180,112,32,	0,46463,50052,51593,52403,
#Partially deleted in new
chr8	19938869	19951908	chr8:19938869-19951908	0	+	19939440	19951908	789624	4	87,241,161,140,	0,418,9310,12899,
#Partially deleted in new
chr8	19938932	19951836	chr8:19938932-19951836	0	+	19939440	19951836	789624	4	24,306,161,68,	0,290,9247,12836,
#Partially deleted in new
chr8	19938970	19967259	chr8:19938970-19967259	3	+	19939440	19965310	789624	10	558,161,180,112,234,243,121,183,105,1950,	0,9209,12798,14339,15149,16870,20289,21930,23144,26339,
#Partially deleted in new
chr8	19939252	19967259	chr8:19939252-19967259	1	+	19939440	19965310	789624	10	276,161,180,112,234,243,121,183,105,1950,	0,8927,12516,14057,14867,16588,20007,21648,22862,26057,
#Partially deleted in new
chr8	19939255	19948303	chr8:19939255-19948303	0	+	19939440	19946573	789624	3	273,157,124,	0,7286,8924,
#Partially deleted in new
chr8	19939255	19951828	chr8:19939255-19951828	0	+	19939255	19939255	8553170	3	273,161,132,	0,8924,12441,
#Partially deleted in new
chr8	19939371	19948485	chr8:19939371-19948485	0	+	19939371	19939371	8553170	2	157,306,	0,8808,
#Partially deleted in new
chr8	19956004	19967196	chr8:19956004-19967196	0	+	19956004	19960938	8553170	4	79,183,105,1887,	0,4896,6110,9305,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	20079113	20124857	chr8:20079113-20124857	3	+	20079113	20079113	8553170	4	409,1144,56,354,	0,38521,41509,45390,
#Deleted in new
chr8	20113342	20113672	chr8:20113342-20113672	7	-	20113342	20113342	16724991	1	330,	0,
#Partially deleted in new
chr8	20144854	20183115	chr8:20144854-20183115	1	-	20145762	20180964	789624	16	1022,134,120,64,52,79,61,44,90,93,84,59,364,247,204,53,	0,2403,2748,3152,4821,5811,20192,26248,26550,28181,29506,33580,34266,35986,36894,38208,
#Partially deleted in new
chr8	20144854	20183206	chr8:20144854-20183206	3	-	20145762	20180964	789624	16	1022,134,120,64,52,79,96,61,44,90,93,84,59,364,247,144,	0,2403,2748,3152,4821,5811,20014,20192,26248,26550,28181,29506,33580,34266,35986,38208,
#Partially deleted in new
chr8	20144855	20183206	chr8:20144855-20183206	1	-	20145787	20180964	789624	16	1021,120,64,52,79,96,61,44,90,93,84,59,364,247,204,144,	0,2747,3151,4820,5810,20013,20191,26247,26549,28180,29505,33579,34265,35985,36893,38207,
#Partially deleted in new
chr8	20144855	20183206	chr8:20144855-20183206	1	-	20145762	20180964	789624	17	1021,134,120,64,52,79,96,61,44,90,93,84,59,364,247,204,144,	0,2402,2747,3151,4820,5810,20013,20191,26247,26549,28180,29505,33579,34265,35985,36893,38207,
#Partially deleted in new
chr8	20144858	20183125	chr8:20144858-20183125	0	-	20148504	20180964	789624	17	1018,134,120,64,102,52,79,96,61,44,90,93,84,59,364,247,63,	0,2399,2744,3148,3556,4817,5807,20010,20188,26244,26546,28177,29502,33576,34262,35982,38204,
#Partially deleted in new
chr8	20145497	20183172	chr8:20145497-20183172	1	-	20145762	20180964	789624	15	379,134,120,64,52,79,61,44,90,93,84,59,364,247,110,	0,1760,2105,2509,4178,5168,19549,25605,25907,27538,28863,32937,33623,35343,37565,
#Partially deleted in new
chr8	20145787	20180964	chr8:20145787-20180964	1	-	20145787	20180964	789624	14	89,120,64,52,79,96,61,44,90,93,84,59,364,124,	0,1815,2219,3888,4878,19081,19259,25315,25617,27248,28573,32647,33333,35053,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	20147602	20150996	chr8:20147602-20150996	0	-	20147602	20147602	8553170	5	120,64,102,52,331,	0,404,812,2073,3063,
#Partially deleted in new
chr8	20171102	20183117	chr8:20171102-20183117	0	-	20171102	20180964	789624	7	44,90,93,59,364,247,55,	0,302,1933,7332,8018,9738,11960,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	20171104	20175922	chr8:20171104-20175922	0	-	20171104	20171104	8553170	5	42,90,93,84,599,	0,300,1931,3256,4219,
#Partially deleted in new
chr8	20197366	20221701	chr8:20197366-20221701	3	+	20197406	20220402	789624	14	176,56,99,94,78,140,102,98,124,151,83,105,130,1439,	0,7117,12066,12979,13202,13810,14285,14735,15415,17451,19046,19853,20786,22896,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr8	20197402	20221689	chr8:20197402-20221689	0	+	20197402	20197402	8553170	11	140,56,99,94,78,140,102,98,4543,130,1427,	0,7081,12030,12943,13166,13774,14249,14699,15379,20750,22860,
#Partially deleted in new
chr8	20197403	20211290	chr8:20197403-20211290	0	+	20197406	20209449	789624	6	139,56,91,94,78,114,	0,7080,12037,12942,13165,13773,
#Partially deleted in new
chr8	20197423	20211254	chr8:20197423-20211254	0	+	20197423	20204008	789624	7	119,125,56,99,94,78,78,	0,6535,7060,12009,12922,13145,13753,
#Partially deleted in new
chr8	20197438	20211415	chr8:20197438-20211415	0	+	20197438	20211343	789624	6	104,56,99,94,78,239,	0,7045,11994,12907,13130,13738,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	20218181	20226819	chr8:20218181-20226819	0	+	20218181	20225328	789624	4	101,125,131,381,	0,7100,7507,8257,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	20229778	20229877	chr8:20229778-20229877	3	+	20229778	20229778	8553170	1	99,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	20246164	20255292	chr8:20246164-20255292	1	-	20249721	20255181	789624	3	4199,804,456,	0,6617,8672,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	20246164	20303963	chr8:20246164-20303963	3	-	20249721	20255181	789624	4	4199,804,479,224,	0,6617,8672,57575,
#Partially deleted in new
chr8	20249721	20255181	chr8:20249721-20255181	1	-	20249721	20255181	789624	4	213,252,804,345,	0,390,3060,5115,
#Partially deleted in new
chr8	20249894	20255181	chr8:20249894-20255181	1	-	20249894	20255181	789624	2	74,157,	0,5130,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	20275772	20290458	chr8:20275772-20290458	3	+	20275772	20275772	5263520	3	142,100,650,	0,13436,14036,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	20290173	20290289	chr8:20290173-20290289	7	+	20290173	20290173	16724991	1	116,	0,
#Partially deleted in new
chr8	20551200	20551405	chr8:20551200-20551405	7	+	20551200	20551200	16724991	1	205,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	20655690	20699944	chr8:20655690-20699944	3	-	20655690	20655690	8553170	2	569,195,	0,44059,
#Partially deleted in new
chr8	20667837	20700134	chr8:20667837-20700134	1	-	20667837	20667837	8553170	2	199,385,	0,31912,
#Deleted in new
chr8	20934434	20934837	chr8:20934434-20934837	7	-	20934434	20934434	16724991	1	403,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	20941427	20950175	chr8:20941427-20950175	3	+	20941427	20941427	8553170	4	73,311,95,89,	0,1514,7271,8659,
#Partially deleted in new
chr8	20952644	20973877	chr8:20952644-20973877	3	-	20952644	20952644	8553170	2	272,145,	0,21088,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	20953126	20962895	chr8:20953126-20962895	1	+	20953126	20953126	8553170	4	370,239,150,115,	0,714,2558,9654,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	20953641	20968904	chr8:20953641-20968904	3	+	20953641	20953641	789624	5	52,235,150,121,118,	0,199,2043,9139,15145,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	20954011	20968904	chr8:20954011-20968904	3	+	20954011	20954011	8553170	4	64,247,121,118,	0,1862,8769,14775,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	20973796	20975029	chr8:20973796-20975029	0	+	20973796	20973796	8553170	2	726,226,	0,1007,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	20973985	20995119	chr8:20973985-20995119	3	+	20973985	20973985	789624	5	668,650,76,159,91,	0,9471,12425,20794,21043,
#Partially deleted in new
chr8	21023295	21029058	chr8:21023295-21029058	3	+	21023295	21023295	8553170	4	281,89,58,153,	0,3913,5236,5610,
#Deleted in new
chr8	21129989	21130100	chr8:21129989-21130100	3	-	21129989	21129989	8553170	1	111,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	21298205	21308174	chr8:21298205-21308174	0	+	21298205	21298205	8553170	2	202,405,	0,9564,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	21298238	21309449	chr8:21298238-21309449	3	+	21298238	21298238	789624	3	169,124,1340,	0,9531,9871,
#Partially deleted in new
chr8	21690402	21788810	chr8:21690402-21788810	1	-	21693277	21788159	0	9	2998,54,173,141,110,355,84,315,691,	0,4061,12402,14582,15529,60185,84569,92182,97717,
#Partially deleted in new
chr8	21692017	21788819	chr8:21692017-21788819	0	-	21782993	21788159	789624	9	1383,54,173,141,110,355,84,558,700,	0,2446,10787,12967,13914,58570,82954,90567,96102,
#Partially deleted in new
chr8	21692842	21812357	chr8:21692842-21812357	3	-	21693277	21788159	0	11	558,54,173,141,110,355,84,315,75,112,127,	0,1621,9962,12142,13089,57745,82129,89742,95277,112174,119388,
#Partially deleted in new
chr8	21692934	21788323	chr8:21692934-21788323	1	-	21693277	21788159	0	7	466,54,173,141,110,355,204,	0,1529,9870,12050,12997,57653,95185,
#Partially deleted in new
chr8	21693181	21788159	chr8:21693181-21788159	1	-	21693277	21788159	0	8	219,54,173,141,110,355,84,40,	0,1282,9623,11803,12750,57406,81790,94938,
#Partially deleted in new
chr8	21750587	21789253	chr8:21750587-21789253	0	-	21750587	21788159	789624	5	355,84,315,75,43,	0,24384,31997,37532,38623,
#Partially deleted in new
chr8	21774975	21788784	chr8:21774975-21788784	0	-	21774975	21782726	789624	3	80,315,151,	0,7609,13658,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	21779549	21788159	chr8:21779549-21788159	0	-	21779549	21779549	8553170	4	168,93,315,40,	0,1312,3035,8570,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	21797459	21797759	chr8:21797459-21797759	7	+	21797459	21797459	16724991	1	300,	0,
#Partially deleted in new
chr8	21908872	21913860	chr8:21908872-21913860	3	-	21909310	21913601	0	5	1059,185,88,282,322,	0,1800,3028,3356,4666,
#Partially deleted in new
chr8	21909463	21912567	chr8:21909463-21912567	0	-	21909463	21909463	8553170	3	468,185,339,	0,1209,2765,
#Partially deleted in new
chr8	21909614	21913690	chr8:21909614-21913690	0	-	21910830	21913601	789624	4	317,185,282,152,	0,1058,2614,3924,
#Partially deleted in new
chr8	21909634	21913663	chr8:21909634-21913663	0	-	21909634	21910828	789624	3	297,185,125,	0,1038,3904,
#Partially deleted in new
chr8	21909828	21913676	chr8:21909828-21913676	0	-	21909828	21913601	789624	5	81,185,88,282,138,	0,844,2072,2400,3710,
#Partially deleted in new
chr8	21909833	21911075	chr8:21909833-21911075	0	-	21909833	21909833	8553170	2	98,403,	0,839,
#Partially deleted in new
chr8	21919670	22006585	chr8:21919670-22006585	3	+	21919770	22005088	789624	28	118,147,94,167,66,105,166,74,120,147,173,194,106,136,74,81,64,109,107,89,108,83,215,139,161,99,128,1591,	0,47186,49812,50473,52205,54999,56685,58099,60413,62060,62969,64975,65915,67470,68113,69332,70673,71140,72197,74692,75821,79084,79420,79865,82441,83548,84232,85324,
#Partially deleted in new
chr8	21919756	21974705	chr8:21919756-21974705	0	+	21919756	21974705	789624	6	32,147,94,167,93,36,	0,47100,49726,50387,52119,54913,
#Partially deleted in new
chr8	21919759	21969896	chr8:21919759-21969896	0	+	21919759	21919759	8553170	3	29,147,414,	0,47097,49723,
#Partially deleted in new
chr8	21921413	21976502	chr8:21921413-21976502	0	+	21921413	21921413	8553170	7	213,147,94,167,66,105,147,	0,45443,48069,48730,50462,53256,54942,
#Partially deleted in new
chr8	21921455	21966989	chr8:21921455-21966989	0	+	21921455	21921455	8553170	3	171,177,133,	0,42693,45401,
#Partially deleted in new
chr8	21966237	22006285	chr8:21966237-22006285	1	+	21966292	22005088	789624	28	76,147,94,167,66,105,166,74,120,147,173,194,106,136,74,81,64,109,107,89,108,83,215,139,161,99,128,1291,	0,619,3245,3906,5638,8432,10118,11532,13846,15493,16402,18408,19348,20903,21546,22765,24106,24573,25630,28125,29254,32517,32853,33298,35874,36981,37665,38757,
#Partially deleted in new
chr8	21988347	21990611	chr8:21988347-21990611	0	+	21988347	21988347	8553170	2	736,268,	0,1996,
#Partially deleted in new
chr8	21991725	21999674	chr8:21991725-21999674	0	+	21991896	21999674	789624	6	249,89,108,83,215,139,	0,2637,3766,7029,7365,7810,
#Deleted in new
chr8	22002984	22004013	chr8:22002984-22004013	0	+	22002984	22002984	8553170	2	333,111,	0,918,
#Partially deleted in new
chr8	22024124	22033156	chr8:22024124-22033156	0	+	22025248	22033156	789624	6	133,107,91,86,126,27,	0,599,1091,1311,1522,9005,
#Partially deleted in new
chr8	22024124	22036863	chr8:22024124-22036863	1	+	22025248	22036682	0	9	133,583,86,126,94,167,35,34,226,	0,599,1311,1522,9005,9984,10385,12368,12513,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	22024133	22036896	chr8:22024133-22036896	3	+	22025248	22036682	0	9	490,583,86,126,94,167,35,34,259,	0,590,1302,1513,8996,9975,10376,12359,12504,
#Partially deleted in new
chr8	22024136	22034155	chr8:22024136-22034155	0	+	22025248	22034155	789624	6	121,91,86,126,94,47,	0,1079,1299,1510,8993,9972,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	22024433	22036897	chr8:22024433-22036897	1	+	22025248	22036682	0	10	190,107,91,86,126,94,167,35,34,260,	0,290,782,1002,1213,8696,9675,10076,12059,12204,
#Partially deleted in new
chr8	22024759	22034148	chr8:22024759-22034148	0	+	22024759	22024759	8553170	5	71,86,126,94,40,	0,676,887,8370,9349,
#Partially deleted in new
chr8	22024842	22036897	chr8:22024842-22036897	1	+	22025248	22036682	0	9	207,91,86,126,94,167,35,34,260,	0,373,593,804,8287,9266,9667,11650,11795,
#Partially deleted in new
chr8	22024850	22036897	chr8:22024850-22036897	1	+	22025248	22036504	0	8	199,91,86,126,94,35,34,260,	0,365,585,796,8279,9659,11642,11787,
#Partially deleted in new
chr8	22025248	22036504	chr8:22025248-22036504	1	+	22025248	22036504	0	6	58,86,126,94,35,12,	0,187,398,7881,9261,11244,
#Partially deleted in new
chr8	22025248	22036682	chr8:22025248-22036682	1	+	22025248	22036682	0	8	58,86,126,94,167,35,34,45,	0,187,398,7881,8860,9261,11244,11389,
#Partially deleted in new
chr8	22033100	22036540	chr8:22033100-22036540	0	+	22033100	22033100	8553170	4	123,167,35,48,	0,1008,1409,3392,
#Partially deleted in new
chr8	22034107	22036897	chr8:22034107-22036897	0	+	22034107	22034107	8553170	4	168,35,34,260,	0,402,2385,2530,
#Partially deleted in new
chr8	22034218	22036896	chr8:22034218-22036896	0	+	22034218	22034218	8553170	4	57,35,169,259,	0,291,2139,2419,
#Deleted in new
chr8	22036490	22036779	chr8:22036490-22036779	0	+	22036490	22036490	8553170	2	36,142,	0,147,
#Partially deleted in new
chr8	22042397	22048806	chr8:22042397-22048806	1	+	22042928	22048249	789624	5	566,37,145,107,851,	0,747,3749,4129,5558,
#Partially deleted in new
chr8	22042425	22048809	chr8:22042425-22048809	3	+	22042928	22048249	789624	5	538,37,178,107,854,	0,719,3688,4101,5530,
#Partially deleted in new
chr8	22044568	22048159	chr8:22044568-22048159	0	+	22044568	22044568	8553170	3	450,145,204,	0,1578,3387,
#Partially deleted in new
chr8	22044671	22048806	chr8:22044671-22048806	0	+	22044671	22044671	8553170	3	1620,107,851,	0,1855,3284,
#Partially deleted in new
chr8	22048994	22069056	chr8:22048994-22069056	0	+	22066875	22069056	789624	4	230,189,156,41,	0,17710,18532,20021,
#Partially deleted in new
chr8	22049148	22070292	chr8:22049148-22070292	0	+	22066875	22070292	789624	7	76,56,156,45,100,57,111,	0,17689,18378,19867,20270,20732,21033,
#Partially deleted in new
chr8	22053554	22066819	chr8:22053554-22066819	0	+	22053554	22053554	8553170	3	232,231,115,	0,1222,13150,
#Partially deleted in new
chr8	22053569	22082524	chr8:22053569-22082524	1	+	22066875	22081463	0	15	217,189,75,156,45,100,57,153,125,106,65,49,8,81,1175,	0,13135,13515,13957,15446,15849,16311,16612,18756,20160,26610,26842,27048,27543,27780,
#Partially deleted in new
chr8	22053569	22069456	chr8:22053569-22069456	0	+	22066875	22069456	789624	6	217,56,75,156,45,38,	0,13268,13515,13957,15446,15849,
#Partially deleted in new
chr8	22054816	22082524	chr8:22054816-22082524	1	+	22066875	22081463	0	16	191,56,75,156,45,100,57,153,125,106,65,49,5,69,81,1175,	0,12021,12268,12710,14199,14602,15064,15365,17509,18913,25363,25595,25978,25985,26296,26533,
#Partially deleted in new
chr8	22054901	22082524	chr8:22054901-22082524	1	+	22066875	22081463	0	14	106,189,156,45,100,57,153,125,106,65,49,8,81,1175,	0,11803,12625,14114,14517,14979,15280,17424,18828,25278,25510,25716,26211,26448,
#Partially deleted in new
chr8	22054906	22070305	chr8:22054906-22070305	0	+	22054906	22054906	8553170	6	101,56,156,503,57,124,	0,11931,12620,14109,14974,15275,
#Partially deleted in new
chr8	22054930	22081686	chr8:22054930-22081686	1	+	22066875	22081463	0	14	77,189,156,100,57,153,125,106,65,49,8,66,81,337,	0,11774,12596,14488,14950,15251,17395,18799,25249,25481,25687,25874,26182,26419,
#Partially deleted in new
chr8	22054942	22082518	chr8:22054942-22082518	1	+	22066875	22081463	0	14	65,56,156,45,100,57,153,125,106,65,49,8,81,1169,	0,11895,12584,14073,14476,14938,15239,17383,18787,25237,25469,25675,26170,26407,
#Partially deleted in new
chr8	22054952	22069262	chr8:22054952-22069262	0	+	22054952	22054952	8553170	5	55,56,75,156,247,	0,11885,12132,12574,14063,
#Partially deleted in new
chr8	22055456	22070249	chr8:22055456-22070249	0	+	22066875	22070249	789624	7	99,56,156,45,100,57,68,	0,11381,12070,13559,13962,14424,14725,
#Partially deleted in new
chr8	22056904	22072450	chr8:22056904-22072450	0	+	22066875	22072450	789624	8	232,189,156,45,100,57,153,125,	0,9800,10622,12111,12514,12976,13277,15421,
#Partially deleted in new
chr8	22056965	22070334	chr8:22056965-22070334	0	+	22066875	22070334	789624	8	171,56,75,156,45,100,57,153,	0,9872,10119,10561,12050,12453,12915,13216,
#Partially deleted in new
chr8	22057864	22082527	chr8:22057864-22082527	3	+	22066875	22081463	0	16	101,189,75,156,45,100,57,153,125,106,65,49,8,66,81,1178,	0,8840,9220,9662,11151,11554,12016,12317,14461,15865,22315,22547,22753,22940,23248,23485,
#Partially deleted in new
chr8	22057864	22082524	chr8:22057864-22082524	1	+	22066875	22081463	0	16	101,189,75,156,45,100,57,153,125,106,65,49,5,69,81,1175,	0,8840,9220,9662,11151,11554,12016,12317,14461,15865,22315,22547,22930,22937,23248,23485,
#Partially deleted in new
chr8	22057887	22070334	chr8:22057887-22070334	0	+	22066875	22070334	789624	9	78,124,189,75,156,45,100,57,153,	0,1485,8817,9197,9639,11128,11531,11993,12294,
#Partially deleted in new
chr8	22059174	22082524	chr8:22059174-22082524	1	+	22066875	22081463	0	16	322,189,75,156,45,100,57,153,125,106,65,49,5,69,81,1175,	0,7530,7910,8352,9841,10244,10706,11007,13151,14555,21005,21237,21620,21627,21938,22175,
#Partially deleted in new
chr8	22059205	22082518	chr8:22059205-22082518	1	+	22066875	22081463	0	16	291,189,75,156,45,100,57,153,125,106,65,49,8,66,81,1169,	0,7499,7879,8321,9810,10213,10675,10976,13120,14524,20974,21206,21412,21599,21907,22144,
#Partially deleted in new
chr8	22059222	22082524	chr8:22059222-22082524	1	+	22066875	22081463	0	15	274,189,75,156,45,100,57,153,125,106,65,49,8,81,1175,	0,7482,7862,8304,9793,10196,10658,10959,13103,14507,20957,21189,21395,21890,22127,
#Partially deleted in new
chr8	22059347	22082518	chr8:22059347-22082518	1	+	22066875	22081463	0	15	149,56,75,156,45,100,57,153,125,106,65,49,8,81,1169,	0,7490,7737,8179,9668,10071,10533,10834,12978,14382,20832,21064,21270,21765,22002,
#Deleted in new
chr8	22066497	22067648	chr8:22066497-22067648	0	+	22066875	22067648	789624	3	396,75,122,	0,587,1029,
#Partially deleted in new
chr8	22066515	22069060	chr8:22066515-22069060	0	+	22066875	22069060	789624	3	378,156,45,	0,1011,2500,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	22089158	22097034	chr8:22089158-22097034	0	+	22089158	22089158	8553170	3	140,79,698,	0,5281,7178,
#Partially deleted in new
chr8	22089183	22098310	chr8:22089183-22098310	0	+	22089253	22094456	789624	7	115,94,79,173,105,123,243,	0,577,5256,7153,8332,8533,8884,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	22089202	22097045	chr8:22089202-22097045	0	+	22089202	22089202	8553170	2	96,2606,	0,5237,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr8	22089207	22104898	chr8:22089207-22104898	3	+	22089253	22102931	789624	17	91,79,173,105,123,243,197,109,77,190,146,129,91,144,141,101,2106,	0,5232,7129,8308,8509,8860,9215,9740,10076,10496,11386,11636,12232,12500,12967,13320,13585,
#Partially deleted in new
chr8	22089207	22104382	chr8:22089207-22104382	0	+	22089253	22102931	789624	18	91,79,173,105,123,243,197,109,77,190,146,129,91,144,141,101,393,314,	0,5232,7129,8308,8509,8860,9215,9740,10076,10496,11386,11636,12232,12500,12967,13320,13585,14861,
#Deleted in new
chr8	22097565	22099124	chr8:22097565-22099124	0	+	22097565	22097565	8553170	4	274,243,197,177,	0,502,857,1382,
#Deleted in new
chr8	22097934	22098477	chr8:22097934-22098477	0	+	22097934	22097934	8553170	2	376,55,	0,488,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	22099818	22101181	chr8:22099818-22101181	0	+	22099818	22099818	8553170	3	75,146,338,	0,775,1025,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	22100137	22101087	chr8:22100137-22101087	0	+	22100137	22100137	8553170	2	602,244,	0,706,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	22101189	22101953	chr8:22101189-22101953	0	+	22101189	22101189	8553170	2	341,246,	0,518,
#Deleted in new
chr8	22101482	22104379	chr8:22101482-22104379	0	+	22101482	22101482	8553170	4	48,608,101,1587,	0,225,1045,1310,
#Deleted in new
chr8	22102526	22103317	chr8:22102526-22103317	0	+	22102526	22102526	8553170	2	102,525,	0,266,
#Partially deleted in new
chr8	22106871	22109397	chr8:22106871-22109397	3	-	22107299	22109300	0	3	1024,214,259,	0,1261,2267,
#Partially deleted in new
chr8	22106873	22109419	chr8:22106873-22109419	1	-	22108106	22109300	789624	2	1473,281,	0,2265,
#Partially deleted in new
chr8	22114414	22131868	chr8:22114414-22131868	3	-	22115699	22129170	789624	19	1348,129,165,116,120,131,70,166,243,164,82,116,90,165,194,151,793,652,1441,	0,1885,2460,4535,4749,5345,5689,5927,6301,6650,7198,8078,8375,9234,10896,11167,12622,14144,16013,
#Partially deleted in new
chr8	22114418	22131052	chr8:22114418-22131052	1	-	22115699	22129170	789624	18	1344,129,116,120,131,70,166,243,164,82,116,90,165,194,151,793,652,625,	0,1881,4531,4745,5341,5685,5923,6297,6646,7194,8074,8371,9230,10892,11163,12618,14140,16009,
#Partially deleted in new
chr8	22115068	22118445	chr8:22115068-22118445	0	-	22115068	22115068	8553170	3	694,129,1571,	0,1231,1806,
#Partially deleted in new
chr8	22118731	22119868	chr8:22118731-22119868	0	-	22118731	22118731	8553170	3	334,120,109,	0,432,1028,
#Deleted in new
chr8	22120118	22122851	chr8:22120118-22122851	0	-	22121209	22122851	789624	6	55,166,243,164,82,62,	0,223,597,946,1494,2671,
#Deleted in new
chr8	22120842	22122690	chr8:22120842-22122690	0	-	22120842	22120842	8553170	4	116,164,82,198,	0,222,770,1650,
#Deleted in new
chr8	22127485	22128116	chr8:22127485-22128116	0	-	22127485	22127485	8553170	2	344,178,	0,453,
#Partially deleted in new
chr8	22128085	22130681	chr8:22128085-22130681	0	-	22128085	22128085	8553170	2	1125,254,	0,2342,
#Deleted in new
chr8	22130470	22133384	chr8:22130470-22133384	0	-	22130470	22130470	8553170	2	582,122,	0,2792,
#Deleted in new
chr8	22138019	22141951	chr8:22138019-22141951	3	-	22138486	22141482	789624	8	533,155,136,114,121,77,73,501,	0,619,906,1396,1943,2152,2605,3431,
#Deleted in new
chr8	22138019	22141853	chr8:22138019-22141853	1	-	22138688	22141482	789624	7	533,155,114,121,77,73,403,	0,619,1396,1943,2152,2605,3431,
#Deleted in new
chr8	22138250	22141540	chr8:22138250-22141540	1	-	22138349	22141482	789624	7	302,136,114,121,77,73,90,	0,675,1165,1712,1921,2374,3200,
#Deleted in new
chr8	22138902	22141902	chr8:22138902-22141902	0	-	22138902	22138902	8553170	6	159,114,121,77,73,452,	0,513,1060,1269,1722,2548,
#Deleted in new
chr8	22138906	22141768	chr8:22138906-22141768	0	-	22138906	22138906	8553170	5	623,121,77,73,318,	0,1056,1265,1718,2544,
#Deleted in new
chr8	22139801	22141769	chr8:22139801-22141769	0	-	22139801	22139801	8553170	4	263,77,73,319,	0,370,823,1649,
#Deleted in new
chr8	22140205	22141951	chr8:22140205-22141951	0	-	22140205	22141482	789624	3	43,91,501,	0,401,1245,
#Partially deleted in new
chr8	22146824	22156832	chr8:22146824-22156832	3	-	22148159	22156542	789624	8	2153,165,170,72,72,72,72,496,	0,4664,5006,7143,7317,7735,8567,9512,
#Partially deleted in new
chr8	22146829	22156751	chr8:22146829-22156751	1	-	22148159	22156542	789624	7	2148,165,170,72,72,72,415,	0,4659,5001,7138,7730,8562,9507,
#Partially deleted in new
chr8	22146829	22156833	chr8:22146829-22156833	0	-	22146829	22146829	8553170	6	2148,165,170,72,1368,497,	0,4659,5001,7138,7312,9507,
#Partially deleted in new
chr8	22151537	22157084	chr8:22151537-22157084	0	-	22151537	22157015	789624	7	116,170,72,72,72,72,89,	0,293,2430,2604,3022,3854,5458,
#Partially deleted in new
chr8	22151891	22156677	chr8:22151891-22156677	0	-	22154204	22156542	789624	6	109,72,72,72,118,341,	0,2076,2250,2668,3500,4445,
#Partially deleted in new
chr8	22156912	22159711	chr8:22156912-22159711	0	+	22156912	22156912	8553170	2	763,237,	0,2562,
#Partially deleted in new
chr8	22158612	22159799	chr8:22158612-22159799	0	+	22158612	22158612	8553170	2	213,325,	0,862,
#Partially deleted in new
chr8	22158723	22162732	chr8:22158723-22162732	0	+	22158723	22158723	8553170	4	358,381,95,159,	0,751,3052,3850,
#Partially deleted in new
chr8	22161654	22164476	chr8:22161654-22164476	1	+	22161828	22164041	789624	6	216,159,123,111,177,211,	0,919,1425,1781,2228,2611,
#Partially deleted in new
chr8	22161796	22164479	chr8:22161796-22164479	3	+	22161828	22164041	789624	5	74,159,123,111,579,	0,777,1283,1639,2104,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	22161797	22164076	chr8:22161797-22164076	1	+	22161828	22163820	789624	5	73,159,123,111,307,	0,776,1282,1638,1972,
#Partially deleted in new
chr8	22161799	22164479	chr8:22161799-22164479	1	+	22161828	22164457	789624	4	71,123,111,214,	0,1280,1636,2466,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	22161804	22164008	chr8:22161804-22164008	1	+	22161828	22163564	789624	4	66,159,123,573,	0,769,1275,1631,
#Partially deleted in new
chr8	22161806	22164479	chr8:22161806-22164479	1	+	22161828	22164041	789624	5	64,123,111,169,214,	0,1273,1629,2076,2459,
#Partially deleted in new
chr8	22161807	22163998	chr8:22161807-22163998	0	+	22161828	22163998	789624	4	63,123,111,98,	0,1272,1628,2093,
#Deleted in new
chr8	22161808	22163235	chr8:22161808-22163235	0	+	22161808	22161808	8553170	3	62,159,156,	0,765,1271,
#Deleted in new
chr8	22163079	22163539	chr8:22163079-22163539	0	+	22163079	22163079	8553170	2	123,104,	0,356,
#Partially deleted in new
chr8	22164735	22212326	chr8:22164735-22212326	3	+	22165405	22211728	0	20	818,114,171,118,179,106,125,116,103,117,146,196,126,161,181,126,128,214,251,733,	0,8866,11407,11797,12225,13116,14969,15632,27313,29322,29709,29988,30726,31944,32504,37067,42118,42567,44709,46858,
#Partially deleted in new
chr8	22165139	22212324	chr8:22165139-22212324	1	+	22165405	22177864	789624	21	414,114,171,118,179,166,106,125,116,103,117,146,196,126,161,181,126,128,214,251,731,	0,8462,11003,11393,11821,12427,12712,14565,15228,26909,28918,29305,29584,30322,31540,32100,36663,41714,42163,44305,46454,
#Partially deleted in new
chr8	22165139	22176942	chr8:22165139-22176942	1	+	22165405	22176942	789624	5	414,114,171,118,19,	0,8462,11003,11393,11784,
#Partially deleted in new
chr8	22165186	22212324	chr8:22165186-22212324	0	+	22165405	22201203	0	19	367,114,171,118,179,106,125,116,103,117,146,196,126,161,181,811,214,251,731,	0,8415,10956,11346,11774,12665,14518,15181,26862,28871,29258,29537,30275,31493,32053,35931,42116,44258,46407,
#Partially deleted in new
chr8	22165251	22201482	chr8:22165251-22201482	1	+	22165405	22201203	0	16	302,114,171,118,179,106,125,116,103,117,146,196,126,161,181,365,	0,8350,10891,11281,11709,12600,14453,15116,26797,28806,29193,29472,30210,31428,31988,35866,
#Partially deleted in new
chr8	22165251	22201482	chr8:22165251-22201482	0	+	22165405	22176942	789624	16	302,114,171,118,216,106,125,116,103,117,146,196,126,161,181,365,	0,8350,10891,11281,11672,12600,14453,15116,26797,28806,29193,29472,30210,31428,31988,35866,
#Partially deleted in new
chr8	22165323	22212314	chr8:22165323-22212314	0	+	22165405	22173643	789624	20	230,114,171,118,216,106,125,116,103,117,146,196,126,161,181,811,128,214,251,721,	0,8278,10819,11209,11600,12528,14381,15044,26725,28734,29121,29400,30138,31356,31916,35794,41530,41979,44121,46270,
#Partially deleted in new
chr8	22165323	22211892	chr8:22165323-22211892	0	+	22165405	22176942	789624	20	230,114,171,118,216,106,125,116,103,117,146,196,126,161,181,126,128,214,251,299,	0,8278,10819,11209,11600,12528,14381,15044,26725,28734,29121,29400,30138,31356,31916,36479,41530,41979,44121,46270,
#Partially deleted in new
chr8	22165334	22177906	chr8:22165334-22177906	0	+	22165405	22176942	789624	7	219,114,171,118,216,166,55,	0,8267,10808,11198,11589,12232,12517,
#Partially deleted in new
chr8	22165399	22201200	chr8:22165399-22201200	0	+	22165405	22196284	0	16	154,114,171,118,179,106,125,116,103,117,146,196,126,660,181,83,	0,8202,10743,11133,11561,12452,14305,14968,26649,28658,29045,29324,30062,30781,31840,35718,
#Partially deleted in new
chr8	22165399	22201200	chr8:22165399-22201200	0	+	22165405	22177864	789624	17	154,114,171,118,179,166,106,125,116,103,117,146,196,126,161,181,83,	0,8202,10743,11133,11561,12167,12452,14305,14968,26649,28658,29045,29324,30062,31280,31840,35718,
#Partially deleted in new
chr8	22165399	22201200	chr8:22165399-22201200	0	+	22165405	22199310	0	17	154,114,171,118,179,106,125,116,103,117,146,196,126,161,181,124,83,	0,8202,10743,11133,11561,12452,14305,14968,26649,28658,29045,29324,30062,31280,31840,33864,35718,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	22169337	22171710	chr8:22169337-22171710	7	+	22169337	22169337	16724991	6	670,54,15,6,18,1605,	0,671,726,742,749,768,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	22169337	22171708	chr8:22169337-22171708	0	+	22169337	22169337	8553170	1	2371,	0,
#Partially deleted in new
chr8	22170158	22176596	chr8:22170158-22176596	0	+	22170158	22170158	8553170	4	150,114,171,64,	0,3443,5984,6374,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	22170696	22176998	chr8:22170696-22176998	0	+	22170696	22170696	8553170	5	311,114,171,118,75,	0,2905,5446,5836,6227,
#Partially deleted in new
chr8	22179696	22192334	chr8:22179696-22192334	0	+	22179696	22179696	8553170	3	133,116,286,	0,671,12352,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	22188368	22192578	chr8:22188368-22192578	3	-	22188368	22188368	8553170	3	485,490,260,	0,2717,3950,
#Partially deleted in new
chr8	22192089	22194506	chr8:22192089-22194506	0	+	22192089	22192089	8553170	4	62,101,117,62,	0,145,1968,2355,
#Partially deleted in new
chr8	22194214	22195587	chr8:22194214-22195587	0	+	22194214	22194214	8553170	3	376,196,126,	0,509,1247,
#Deleted in new
chr8	22198415	22201482	chr8:22198415-22201482	0	+	22198415	22198415	8553170	2	972,365,	0,2702,
#Partially deleted in new
chr8	22219703	22232101	chr8:22219703-22232101	1	-	22221352	22228357	789624	6	2184,118,175,194,122,306,	0,4522,7147,8489,9084,12092,
#Partially deleted in new
chr8	22219720	22232341	chr8:22219720-22232341	3	-	22221352	22228357	789624	5	2167,118,175,194,546,	0,4505,7130,8472,12075,
#Partially deleted in new
chr8	22221457	22227693	chr8:22221457-22227693	0	-	22221457	22227668	789624	4	430,118,175,46,	0,2768,5393,6190,
#Partially deleted in new
chr8	22223732	22228253	chr8:22223732-22228253	0	-	22223732	22223732	8553170	3	611,175,61,	0,3118,4460,
#Partially deleted in new
chr8	22224291	22228678	chr8:22224291-22228678	0	-	22224291	22224291	8553170	3	52,175,486,	0,2559,3901,
#Deleted in new
chr8	22244961	22245043	chr8:22244961-22245043	3	-	22244961	22244961	5263520	1	82,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	22245103	22251167	chr8:22245103-22251167	1	+	22245449	22250518	789624	9	80,170,44,152,125,169,266,153,772,	0,341,2117,2753,3050,3377,3940,4971,5292,
#Partially deleted in new
chr8	22245165	22248617	chr8:22245165-22248617	0	+	22245449	22248617	789624	6	55,170,44,152,125,137,	0,279,2055,2691,2988,3315,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	22245234	22254600	chr8:22245234-22254600	3	+	22245449	22250518	789624	8	380,44,152,125,169,266,153,4205,	0,1986,2622,2919,3246,3809,4840,5161,
#Partially deleted in new
chr8	22245431	22250896	chr8:22245431-22250896	0	+	22245449	22248491	789624	6	183,44,152,169,153,501,	0,1789,2425,3049,4643,4964,
#Partially deleted in new
chr8	22247220	22250159	chr8:22247220-22250159	0	+	22247220	22247220	8553170	6	44,152,125,169,266,85,	0,636,933,1260,1823,2854,
#Partially deleted in new
chr8	22254575	22275162	chr8:22254575-22275162	3	-	22254575	22254575	789624	2	331,184,	0,20403,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr8	22275296	22357563	chr8:22275296-22357563	3	+	22279386	22355505	0	23	102,244,88,139,207,111,118,125,81,114,189,85,90,141,114,189,102,117,89,106,254,108,2215,	0,4044,5823,6080,7737,8865,12231,13245,14550,14936,28724,29487,30630,32636,34664,35815,39031,39732,40948,42873,77662,78974,80052,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr8	22275336	22356071	chr8:22275336-22356071	1	+	22279386	22355505	0	22	62,244,88,139,207,111,118,125,81,114,189,85,90,141,114,189,102,117,89,106,254,723,	0,4004,5783,6040,7697,8825,12191,13205,14510,14896,28684,29447,30590,32596,34624,35775,38991,39692,40908,42833,77622,80012,
#Partially deleted in new
chr8	22275566	22355516	chr8:22275566-22355516	1	+	22279386	22355505	0	23	463,244,88,139,207,111,118,125,81,114,189,85,90,141,114,189,102,117,89,106,254,108,168,	0,3774,5553,5810,7467,8595,11961,12975,14280,14666,28454,29217,30360,32366,34394,35545,38761,39462,40678,42603,77392,78704,79782,
#Partially deleted in new
chr8	22279361	22355530	chr8:22279361-22355530	1	+	22279386	22355505	0	21	223,88,139,207,111,118,125,81,114,189,85,90,141,114,189,102,117,89,106,254,182,	0,1758,2015,3672,4800,8166,9180,10485,10871,24659,25422,26565,28571,30599,31750,34966,35667,36883,38808,73597,75987,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	22352798	22356088	chr8:22352798-22356088	0	+	22352798	22352798	8553170	3	414,108,740,	0,1472,2550,
#Partially deleted in new
chr8	22367248	22422685	chr8:22367248-22422685	3	+	22404710	22419698	789624	9	160,285,187,170,123,189,208,185,3134,	0,37447,41061,42697,47531,48520,48824,50402,52303,
#Partially deleted in new
chr8	22367277	22404980	chr8:22367277-22404980	0	+	22404710	22404980	789624	2	92,285,	0,37418,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	22367286	22434129	chr8:22367286-22434129	1	+	22404710	22434004	789624	9	122,285,187,170,123,189,208,185,239,	0,37409,41023,44750,47493,48482,48786,50364,66604,
#Partially deleted in new
chr8	22367304	22422741	chr8:22367304-22422741	1	+	22404710	22419698	789624	9	104,285,187,170,123,189,208,185,3190,	0,37391,41005,44732,47475,48464,48768,50346,52247,
#Partially deleted in new
chr8	22367536	22420140	chr8:22367536-22420140	1	+	22404710	22419698	789624	9	201,285,187,170,123,189,208,185,589,	0,37159,40773,44500,47243,48232,48536,50114,52015,
#Partially deleted in new
chr8	22367537	22404977	chr8:22367537-22404977	0	+	22404710	22404977	789624	3	200,88,282,	0,11889,37158,
#Partially deleted in new
chr8	22389864	22390655	chr8:22389864-22390655	7	-	22389864	22389864	16724991	2	434,49,	0,742,
#Partially deleted in new
chr8	22392829	22404870	chr8:22392829-22404870	0	+	22404710	22404870	789624	2	403,175,	0,11866,
#Partially deleted in new
chr8	22398227	22408407	chr8:22398227-22408407	0	+	22404710	22408407	789624	3	84,285,98,	0,6468,10082,
#Partially deleted in new
chr8	22398718	22409954	chr8:22398718-22409954	0	+	22404710	22409954	789624	4	79,285,187,9,	0,5977,9591,11227,
#Partially deleted in new
chr8	22404516	22408421	chr8:22404516-22408421	0	+	22404710	22408421	789624	2	464,112,	0,3793,
#Partially deleted in new
chr8	22411876	22416269	chr8:22411876-22416269	0	+	22412110	22416269	789624	4	330,123,189,197,	0,2903,3892,4196,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	22415126	22417697	chr8:22415126-22417697	0	+	22415126	22415126	8553170	3	831,208,47,	0,946,2524,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	22434390	22434497	chr8:22434390-22434497	3	+	22434390	22434390	8553170	1	107,	0,
#Partially deleted in new
chr8	22440818	22522813	chr8:22440818-22522813	1	+	22441409	22522787	789624	8	640,198,125,112,146,140,78,159,	0,34135,34681,57182,70267,72474,81672,81836,
#Partially deleted in new
chr8	22441082	22541125	chr8:22441082-22541125	3	+	22441409	22540802	789624	14	376,198,125,112,146,140,78,95,126,72,82,98,30,511,	0,33871,34417,56918,70003,72210,81408,81572,86309,87423,91142,91838,98386,99532,
#Partially deleted in new
chr8	22441123	22541142	chr8:22441123-22541142	1	+	22441409	22540802	789624	13	335,198,125,112,146,140,78,95,126,72,82,98,528,	0,33830,34376,56877,69962,72169,81367,81531,86268,87382,91101,91797,99491,
#Partially deleted in new
chr8	22441135	22541056	chr8:22441135-22541056	1	+	22441409	22540802	789624	15	323,198,125,112,146,140,78,95,126,72,27,82,98,30,442,	0,33818,34364,56865,69950,72157,81355,81519,86256,87370,90166,91089,91785,98333,99479,
#Partially deleted in new
chr8	22441364	22475667	chr8:22441364-22475667	0	+	22441364	22475667	789624	3	94,198,168,	0,33589,34135,
#Partially deleted in new
chr8	22475591	22527525	chr8:22475591-22527525	0	+	22475591	22527525	789624	6	33,146,140,78,95,134,	0,35494,37701,46899,47063,51800,
#Partially deleted in new
chr8	22492630	22493044	chr8:22492630-22493044	7	+	22492630	22492630	16724991	1	414,	0,
#Partially deleted in new
chr8	22510907	22522731	chr8:22510907-22522731	0	+	22511123	22522731	789624	4	324,140,78,77,	0,2385,11583,11747,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	22540844	22545405	chr8:22540844-22545405	3	-	22540844	22540844	8553170	2	3856,220,	0,4341,
#Partially deleted in new
chr8	22544985	22556905	chr8:22544985-22556905	0	+	22544985	22544985	8553170	5	144,153,157,73,191,	0,4920,9466,9922,11729,
#Deleted in new
chr8	22544989	22554980	chr8:22544989-22554980	0	+	22544989	22544989	8553170	4	140,153,157,118,	0,4916,9462,9873,
#Partially deleted in new
chr8	22551694	22575788	chr8:22551694-22575788	3	+	22554506	22574728	0	21	328,157,118,194,64,39,67,91,87,54,87,47,140,53,47,115,126,312,104,107,1122,	0,2757,3168,5020,6434,9640,10170,12292,12588,12773,13573,14131,14650,14966,15127,15366,17453,19215,20023,20645,22972,
#Partially deleted in new
chr8	22551926	22566694	chr8:22551926-22566694	0	+	22554506	22566428	789624	13	96,157,118,194,64,39,67,91,87,54,87,140,34,	0,2525,2936,4788,6202,9408,9938,12060,12356,12541,13341,14418,14734,
#Partially deleted in new
chr8	22554247	22575048	chr8:22554247-22575048	0	+	22554247	22554247	8553170	19	361,118,194,64,39,67,91,87,54,87,659,53,47,115,126,312,104,107,382,	0,615,2467,3881,7087,7617,9739,10035,10220,11020,11578,12413,12574,12813,14900,16662,17470,18092,20419,
#Partially deleted in new
chr8	22554450	22561689	chr8:22554450-22561689	0	+	22554450	22554450	8553170	5	158,118,194,64,355,	0,412,2264,3678,6884,
#Partially deleted in new
chr8	22554897	22564306	chr8:22554897-22564306	0	+	22554897	22564306	789624	5	83,194,64,91,24,	0,1817,3231,9089,9385,
#Partially deleted in new
chr8	22556685	22564362	chr8:22556685-22564362	0	+	22556685	22556685	8553170	6	223,64,39,67,91,80,	0,1443,4649,5179,7301,7597,
#Partially deleted in new
chr8	22560930	22565872	chr8:22560930-22565872	0	+	22560930	22560930	8553170	8	120,202,67,91,87,54,87,47,	0,404,934,3056,3352,3537,4337,4895,
#Deleted in new
chr8	22564772	22565665	chr8:22564772-22565665	0	+	22564772	22564772	8553170	2	301,398,	0,495,
#Deleted in new
chr8	22564826	22566855	chr8:22564826-22566855	0	+	22564826	22564826	8553170	5	247,87,140,53,34,	0,441,1518,1834,1995,
#Partially deleted in new
chr8	22564867	22571071	chr8:22564867-22571071	0	+	22564867	22564867	8553170	9	206,87,47,140,53,47,115,126,162,	0,400,958,1477,1793,1954,2193,4280,6042,
#Deleted in new
chr8	22565051	22567112	chr8:22565051-22567112	0	+	22565051	22565051	8553170	3	303,208,52,	0,1609,2009,
#Partially deleted in new
chr8	22565265	22569248	chr8:22565265-22569248	0	+	22565265	22565265	8553170	5	89,47,208,115,101,	0,560,1395,1795,3882,
#Partially deleted in new
chr8	22565282	22571026	chr8:22565282-22571026	0	+	22566420	22571026	789624	7	72,140,53,47,115,126,117,	0,1062,1378,1539,1778,3865,5627,
#Partially deleted in new
chr8	22565677	22575495	chr8:22565677-22575495	1	+	22566420	22574728	0	10	195,140,53,47,115,126,312,104,107,829,	0,667,983,1144,1383,3470,5232,6040,6662,8989,
#Partially deleted in new
chr8	22565768	22571818	chr8:22565768-22571818	0	+	22565768	22565768	8553170	7	104,53,47,115,126,312,101,	0,892,1053,1292,3379,5141,5949,
#Deleted in new
chr8	22565996	22567171	chr8:22565996-22567171	3	-	22565996	22565996	8553170	2	448,137,	0,1038,
#Deleted in new
chr8	22566000	22567178	chr8:22566000-22567178	0	+	22566420	22567178	789624	5	243,140,53,47,118,	0,344,660,821,1060,
#Partially deleted in new
chr8	22567037	22571821	chr8:22567037-22571821	0	+	22567037	22571821	789624	4	138,126,312,104,	0,2110,3872,4680,
#Partially deleted in new
chr8	22570943	22575311	chr8:22570943-22575311	0	+	22570943	22574986	789624	5	278,104,107,58,338,	0,774,1396,3723,4030,
#Partially deleted in new
chr8	22571691	22575005	chr8:22571691-22575005	0	+	22571691	22571691	8553170	3	130,107,339,	0,648,2975,
#Partially deleted in new
chr8	22573336	22574789	chr8:22573336-22574789	0	+	22573336	22573336	8553170	2	86,123,	0,1330,
#Partially deleted in new
chr8	22578278	22589684	chr8:22578278-22589684	0	+	22580604	22589684	789624	8	49,95,152,70,146,79,77,89,	0,2324,3100,6542,6738,7042,11019,11317,
#Partially deleted in new
chr8	22578740	22594298	chr8:22578740-22594298	3	+	22578779	22593910	0	10	787,95,152,70,146,79,77,146,118,566,	0,1862,2638,6080,6276,6580,10557,10855,12810,14992,
#Partially deleted in new
chr8	22578740	22594288	chr8:22578740-22594288	1	+	22578779	22593910	0	10	787,95,152,70,146,79,77,146,118,556,	0,1862,2638,6080,6276,6580,10557,10855,12810,14992,
#Partially deleted in new
chr8	22579129	22594298	chr8:22579129-22594298	1	+	22580604	22593910	0	10	398,95,152,70,146,79,77,146,118,566,	0,1473,2249,5691,5887,6191,10168,10466,12421,14603,
#Partially deleted in new
chr8	22579129	22589741	chr8:22579129-22589741	0	+	22580604	22589741	789624	8	80,95,152,70,146,79,77,146,	0,1473,2249,5691,5887,6191,10168,10466,
#Partially deleted in new
chr8	22579149	22594265	chr8:22579149-22594265	1	+	22580604	22593910	0	10	75,95,152,70,146,79,77,146,118,533,	0,1453,2229,5671,5867,6171,10148,10446,12401,14583,
#Deleted in new
chr8	22579645	22580658	chr8:22579645-22580658	0	+	22580604	22580658	789624	2	153,56,	0,957,
#Partially deleted in new
chr8	22580150	22585162	chr8:22580150-22585162	0	+	22580604	22585162	789624	5	44,95,152,70,146,	0,452,1228,4670,4866,
#Partially deleted in new
chr8	22580211	22585380	chr8:22580211-22585380	0	+	22580604	22585380	789624	6	55,95,152,70,146,60,	0,391,1167,4609,4805,5109,
#Partially deleted in new
chr8	22580225	22585399	chr8:22580225-22585399	0	+	22580604	22585399	789624	6	186,95,152,70,146,79,	0,377,1153,4595,4791,5095,
#Partially deleted in new
chr8	22580470	22594298	chr8:22580470-22594298	1	+	22580604	22593806	0	8	227,152,70,146,79,77,146,566,	0,908,4350,4546,4850,8827,9125,13262,
#Partially deleted in new
chr8	22580470	22594288	chr8:22580470-22594288	1	+	22580604	22593910	789624	9	227,152,70,72,73,76,146,118,556,	0,908,4350,4546,4619,8828,9125,11080,13262,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	22580489	22598025	chr8:22580489-22598025	1	+	22580604	22594649	0	10	208,152,70,146,79,77,146,118,100,3496,	0,889,4331,4527,4831,8808,9106,11061,13243,14040,
#Partially deleted in new
chr8	22580528	22594262	chr8:22580528-22594262	1	+	22580604	22593910	0	9	169,152,70,146,79,77,146,118,530,	0,850,4292,4488,4792,8769,9067,11022,13204,
#Partially deleted in new
chr8	22580599	22589736	chr8:22580599-22589736	0	+	22580604	22580985	789624	8	98,117,152,70,146,79,77,141,	0,362,779,4221,4417,4721,8698,8996,
#Partially deleted in new
chr8	22584839	22594086	chr8:22584839-22594086	0	+	22584839	22589733	789624	6	51,146,79,146,118,354,	0,177,481,4756,6711,8893,
#Deleted in new
chr8	22584853	22585700	chr8:22584853-22585700	0	+	22584853	22584853	8553170	3	37,146,380,	0,163,467,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	22587731	22594290	chr8:22587731-22594290	0	+	22587731	22587731	8553170	1	6559,	0,
#Partially deleted in new
chr8	22588201	22594290	chr8:22588201-22594290	1	+	22589596	22593910	789624	4	1173,146,118,558,	0,1394,3349,5531,
#Partially deleted in new
chr8	22589273	22602084	chr8:22589273-22602084	0	+	22589596	22602084	789624	5	101,146,476,141,113,	0,322,11608,12438,12698,
#Partially deleted in new
chr8	22589281	22593974	chr8:22589281-22593974	1	+	22589596	22593910	789624	4	93,146,118,242,	0,314,2269,4451,
#Partially deleted in new
chr8	22589282	22594195	chr8:22589282-22594195	1	+	22589596	22593806	789624	3	92,146,463,	0,313,4450,
#Partially deleted in new
chr8	22589292	22600966	chr8:22589292-22600966	3	+	22589596	22600917	789624	5	82,146,118,100,85,	0,303,2258,4440,11589,
#Partially deleted in new
chr8	22589323	22601360	chr8:22589323-22601360	0	+	22589323	22600990	789624	4	51,146,118,479,	0,272,2227,11558,
#Deleted in new
chr8	22599600	22604133	chr8:22599600-22604133	1	+	22599720	22603306	789624	7	160,476,141,109,113,83,939,	0,1281,2111,2371,2599,2960,3594,
#Deleted in new
chr8	22599600	22604150	chr8:22599600-22604150	1	+	22599720	22603218	789624	6	160,476,141,109,113,956,	0,1281,2111,2371,2599,3594,
#Deleted in new
chr8	22599646	22604150	chr8:22599646-22604150	3	+	22599720	22603306	789624	7	114,476,141,109,113,107,956,	0,1235,2065,2325,2553,2890,3548,
#Deleted in new
chr8	22599824	22601207	chr8:22599824-22601207	0	+	22599824	22599824	8553170	2	627,326,	0,1057,
#Deleted in new
chr8	22600930	22604147	chr8:22600930-22604147	1	+	22601057	22603413	789624	7	427,141,109,113,107,94,857,	0,781,1041,1269,1606,2264,2360,
#Deleted in new
chr8	22601795	22602586	chr8:22601795-22602586	0	+	22601798	22602586	789624	3	57,341,50,	0,176,741,
#Deleted in new
chr8	22602002	22602928	chr8:22602002-22602928	0	+	22602002	22602647	789624	2	78,729,	0,197,
#Partially deleted in new
chr8	22604631	22621514	chr8:22604631-22621514	3	+	22605773	22619682	789624	21	211,96,92,92,115,130,97,120,223,114,164,172,231,237,145,83,147,112,189,206,1877,	0,1104,1453,1975,2278,2564,3337,8385,9460,9758,10206,10793,11050,11380,12788,13064,13717,13985,14195,14518,15006,
#Partially deleted in new
chr8	22604762	22608008	chr8:22604762-22608008	0	+	22604762	22608008	789624	6	80,92,92,115,130,40,	0,1322,1844,2147,2433,3206,
#Deleted in new
chr8	22604790	22606703	chr8:22604790-22606703	1	+	22605773	22606702	789624	4	52,96,92,97,	0,945,1294,1816,
#Partially deleted in new
chr8	22605037	22620471	chr8:22605037-22620471	1	+	22605773	22619682	789624	21	381,96,92,92,115,130,97,120,223,114,164,172,231,237,145,83,147,112,189,206,834,	0,698,1047,1569,1872,2158,2931,7979,9054,9352,9800,10387,10644,10974,12382,12658,13311,13579,13789,14112,14600,
#Deleted in new
chr8	22605499	22607289	chr8:22605499-22607289	0	+	22605773	22607289	789624	6	60,96,92,92,115,94,	0,236,585,1107,1410,1696,
#Deleted in new
chr8	22605718	22607325	chr8:22605718-22607325	0	+	22605773	22607325	789624	5	113,92,92,115,130,	0,366,888,1191,1477,
#Partially deleted in new
chr8	22606599	22608077	chr8:22606599-22608077	0	+	22606599	22608069	789624	4	99,115,130,109,	0,310,596,1369,
#Partially deleted in new
chr8	22606907	22620468	chr8:22606907-22620468	1	+	22614437	22619400	789624	16	117,90,97,120,223,114,164,172,231,237,145,83,147,112,189,1319,	0,328,1061,6109,7184,7482,7930,8517,8774,9104,10512,10788,11441,11709,11919,12242,
#Deleted in new
chr8	22612702	22615596	chr8:22612702-22615596	0	+	22612978	22615596	789624	5	434,223,114,164,172,	0,1389,1687,2135,2722,
#Deleted in new
chr8	22613884	22614573	chr8:22613884-22614573	0	+	22613884	22613884	8553170	2	430,184,	0,505,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	22613907	22616657	chr8:22613907-22616657	3	-	22613907	22613907	8553170	1	2750,	0,
#Partially deleted in new
chr8	22614387	22620468	chr8:22614387-22620468	0	+	22614387	22619682	789624	12	116,164,172,231,237,145,83,147,112,189,206,831,	0,450,1037,1294,1624,3032,3308,3961,4229,4439,4762,5250,
#Partially deleted in new
chr8	22615532	22619364	chr8:22615532-22619364	1	+	22616014	22618926	789624	12	64,231,221,13,24,124,83,147,112,47,140,215,	0,149,479,1869,1883,1908,2163,2816,3084,3294,3343,3617,
#Partially deleted in new
chr8	22617387	22620468	chr8:22617387-22620468	0	+	22617387	22617387	8553170	6	177,80,147,399,206,831,	0,311,961,1229,1762,2250,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	22618156	22620964	chr8:22618156-22620964	0	+	22618156	22618156	8553170	5	339,112,189,206,1327,	0,460,670,993,1481,
#Partially deleted in new
chr8	22620417	22669120	chr8:22620417-22669120	3	-	22621421	22669051	789624	9	1151,135,142,41,137,62,41,49,77,	0,3497,3804,9546,10024,16107,16504,24337,48626,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	22620435	22626542	chr8:22620435-22626542	0	-	22620435	22620435	8553170	3	1133,135,2321,	0,3479,3786,
#Partially deleted in new
chr8	22620711	22669113	chr8:22620711-22669113	1	-	22621421	22630576	789624	7	857,135,142,41,137,49,70,	0,3203,3510,9252,9730,24043,48332,
#Partially deleted in new
chr8	22620774	22644804	chr8:22620774-22644804	1	-	22621421	22636937	789624	7	794,135,142,41,137,41,50,	0,3140,3447,9189,9667,16147,23980,
#Partially deleted in new
chr8	22621269	22669079	chr8:22621269-22669079	0	-	22621269	22621269	8553170	8	299,135,142,41,137,62,41,36,	0,2645,2952,8694,9172,15255,15652,47774,
#Partially deleted in new
chr8	22621530	22644804	chr8:22621530-22644804	0	-	22621530	22621530	8553170	9	38,157,135,142,41,137,62,41,50,	0,1010,2384,2691,8433,8911,14994,15391,23224,
#Partially deleted in new
chr8	22624229	22669125	chr8:22624229-22669125	0	-	22634493	22669051	789624	8	134,41,137,113,62,41,49,82,	0,5734,6212,10183,12295,12692,20525,44814,
#Partially deleted in new
chr8	22625046	22669122	chr8:22625046-22669122	1	-	22625300	22669051	789624	7	366,41,137,62,41,49,79,	0,4917,5395,11478,11875,19708,43997,
#Partially deleted in new
chr8	22625300	22644896	chr8:22625300-22644896	1	-	22625300	22644896	789624	7	112,41,137,62,41,49,8,	0,4663,5141,11224,11621,19454,19588,
#Partially deleted in new
chr8	22629703	22644804	chr8:22629703-22644804	0	-	22629703	22629703	8553170	5	301,137,62,41,50,	0,738,6821,7218,15051,
#Partially deleted in new
chr8	22636589	22669091	chr8:22636589-22669091	0	-	22636589	22636589	8553170	3	373,49,48,	0,8165,32454,
#Partially deleted in new
chr8	22644587	22669148	chr8:22644587-22669148	1	-	22644727	22669051	789624	2	216,105,	0,24456,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	22679012	22684009	chr8:22679012-22684009	3	-	22679012	22679012	8553170	1	4997,	0,
#Deleted in new
chr8	22687658	22693302	chr8:22687658-22693302	3	-	22690472	22692944	789624	2	3824,512,	0,5132,
#Deleted in new
chr8	22690042	22692414	chr8:22690042-22692414	1	-	22690472	22692341	789624	2	1440,113,	0,2259,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	22690149	22798616	chr8:22690149-22798616	3	+	22690149	22690149	8553170	5	164,148,132,45,81,	0,54444,55420,57376,108386,
#Deleted in new
chr8	22690423	22693178	chr8:22690423-22693178	1	-	22691473	22692944	789624	3	1059,53,388,	0,1878,2367,
#Deleted in new
chr8	22690471	22692717	chr8:22690471-22692717	0	-	22690471	22690471	8553170	2	1011,219,	0,2027,
#Deleted in new
chr8	22691164	22692224	chr8:22691164-22692224	0	-	22691164	22691164	8553170	2	318,187,	0,873,
#Partially deleted in new
chr8	22713250	22927908	chr8:22713250-22927908	3	-	22713369	22927714	789624	7	286,114,46,99,127,137,86,	0,11592,13924,104386,206933,214333,214572,
#Deleted in new
chr8	22744617	22745737	chr8:22744617-22745737	0	+	22744617	22744617	8553170	2	124,168,	0,952,
#Partially deleted in new
chr8	22747502	22758192	chr8:22747502-22758192	1	+	22747502	22747502	8553170	4	68,52,281,1229,	0,7308,8225,9461,
#Partially deleted in new
chr8	22815072	22941336	chr8:22815072-22941336	0	-	22815072	22815072	8553170	5	47,99,127,137,65,	0,2564,105111,112511,126199,
#Partially deleted in new
chr8	22877971	22884139	chr8:22877971-22884139	0	+	22877971	22877971	8553170	4	195,117,78,182,	0,1319,2539,5986,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	22877983	22888022	chr8:22877983-22888022	3	+	22877983	22877983	789624	4	168,78,3286,347,	0,2527,5974,9692,
#Partially deleted in new
chr8	22878141	22884420	chr8:22878141-22884420	0	+	22878141	22878141	8553170	3	25,78,463,	0,2369,5816,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	22895433	22897813	chr8:22895433-22897813	3	-	22895433	22895433	8553170	2	801,97,	0,2283,
#Partially deleted in new
chr8	22927583	23000000	chr8:22927583-23000000	0	-	22927583	22999822	789624	2	137,322,	0,72095,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	22977876	22978127	chr8:22977876-22978127	3	+	22977876	22977876	8553170	1	251,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	22984595	23007531	chr8:22984595-23007531	0	-	22984595	22984595	8553170	2	323,148,	0,22788,
#Partially deleted in new
chr8	22987416	23018441	chr8:22987416-23018441	1	+	22994583	23017469	789624	12	147,113,79,202,104,186,1019,119,151,89,106,1190,	0,4651,7144,17008,17955,18543,19311,20576,23121,27273,28221,29835,
#Partially deleted in new
chr8	22987481	23006145	chr8:22987481-23006145	0	+	22994583	23006145	789624	6	82,150,79,202,104,186,	0,4549,7079,16943,17890,18478,
#Partially deleted in new
chr8	22992096	22999161	chr8:22992096-22999161	0	+	22992096	22992096	8553170	3	84,79,239,	0,2464,6826,
#Partially deleted in new
chr8	22995840	23020192	chr8:22995840-23020192	1	+	22995871	23017469	789624	10	42,202,104,186,1019,119,151,89,106,2941,	0,8584,9531,10119,10887,12152,14697,18849,19797,21411,
#Partially deleted in new
chr8	22999578	23020199	chr8:22999578-23020199	3	+	23004434	23017469	789624	10	527,202,104,186,1019,119,151,89,106,2948,	0,4846,5793,6381,7149,8414,10959,15111,16059,17673,
#Partially deleted in new
chr8	22999928	23004844	chr8:22999928-23004844	0	+	22999928	22999928	8553170	2	177,420,	0,4496,
#Deleted in new
chr8	23004043	23006129	chr8:23004043-23006129	0	+	23004043	23004043	8553170	4	100,202,104,170,	0,381,1328,1916,
#Partially deleted in new
chr8	23006380	23019335	chr8:23006380-23019335	3	-	23006380	23006380	8553170	2	1737,208,	0,12747,
#Partially deleted in new
chr8	23007838	23010641	chr8:23007838-23010641	0	+	23007838	23007838	8553170	2	273,104,	0,2699,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	23020132	23069179	chr8:23020132-23069179	3	-	23022670	23068894	0	9	2852,73,156,32,272,112,114,106,429,	0,4055,7000,7589,8198,9477,10626,23005,48618,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	23020132	23027968	chr8:23020132-23027968	0	-	23020132	23020132	8553170	4	2852,73,156,247,	0,4055,7000,7589,
#Partially deleted in new
chr8	23022310	23069021	chr8:23022310-23069021	1	-	23022670	23068894	0	10	674,73,156,32,111,74,112,114,106,271,	0,1877,4822,5411,6020,6218,7299,8448,20827,46440,
#Partially deleted in new
chr8	23022473	23069031	chr8:23022473-23069031	0	-	23029706	23068894	789624	9	511,73,156,32,111,74,112,114,281,	0,1714,4659,5248,5857,6055,7136,8285,46277,
#Partially deleted in new
chr8	23022885	23027634	chr8:23022885-23027634	0	-	23022885	23022885	8553170	3	99,73,502,	0,1302,4247,
#Partially deleted in new
chr8	23028264	23030872	chr8:23028264-23030872	0	-	23028264	23028264	8553170	3	338,112,114,	0,1345,2494,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	23028539	23049927	chr8:23028539-23049927	0	-	23028539	23028539	8553170	5	63,112,114,106,151,	0,1070,2219,14598,21237,
#Partially deleted in new
chr8	23042903	23069022	chr8:23042903-23069022	0	-	23042903	23042903	8553170	2	340,272,	0,25847,
#Partially deleted in new
chr8	23068228	23083619	chr8:23068228-23083619	3	+	23068228	23068228	789624	3	192,72,2372,	0,12756,13019,
#Partially deleted in new
chr8	23071376	23074488	chr8:23071376-23074488	3	-	23071376	23071376	8553170	2	431,53,	0,3059,
#Partially deleted in new
chr8	23072028	23074488	chr8:23072028-23074488	1	-	23072028	23072028	8553170	2	397,53,	0,2407,
#Partially deleted in new
chr8	23084354	23103558	chr8:23084354-23103558	3	+	23084354	23084354	789624	4	191,141,48,862,	0,5793,16282,18342,
#Partially deleted in new
chr8	23084402	23115536	chr8:23084402-23115536	3	+	23114731	23115536	789624	6	143,141,48,106,114,29,	0,5745,16234,27317,30254,31105,
#Partially deleted in new
chr8	23102589	23117437	chr8:23102589-23117437	3	+	23103121	23117031	789624	5	592,106,114,109,797,	0,9130,12067,12918,14051,
#Partially deleted in new
chr8	23102920	23117050	chr8:23102920-23117050	0	+	23103121	23115537	789624	4	261,114,109,410,	0,11736,12587,13720,
#Deleted in new
chr8	23114506	23116674	chr8:23114506-23116674	0	+	23114506	23114506	8553170	3	264,109,34,	0,1001,2134,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	23135587	23164030	chr8:23135587-23164030	3	-	23137869	23163935	789624	9	2416,73,186,32,254,112,114,106,245,	0,2600,8862,9470,10080,11373,12850,19286,28198,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	23189278	23190675	chr8:23189278-23190675	3	+	23189278	23189278	8553170	2	173,464,	0,933,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	23190451	23225126	chr8:23190451-23225126	3	-	23191693	23225061	0	10	1562,73,183,32,96,74,112,114,97,371,	0,6680,8814,9434,10053,10235,11356,12196,21664,34304,
#Partially deleted in new
chr8	23191648	23225061	chr8:23191648-23225061	1	-	23191693	23225061	789624	9	365,73,183,32,96,74,112,12,31,	0,5483,7617,8237,8856,9038,10159,10999,33382,
#Partially deleted in new
chr8	23191813	23197273	chr8:23191813-23197273	0	-	23191813	23191813	8553170	2	200,142,	0,5318,
#Partially deleted in new
chr8	23199885	23224600	chr8:23199885-23224600	0	-	23199885	23201830	789624	7	32,96,74,112,114,97,168,	0,619,801,1922,2762,12230,24547,
#Deleted in new
chr8	23206917	23207369	chr8:23206917-23207369	7	+	23206917	23206917	16724991	1	452,	0,
#Partially deleted in new
chr8	23224470	23225882	chr8:23224470-23225882	0	+	23224470	23224470	8553170	2	421,78,	0,1334,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	23225220	23230926	chr8:23225220-23230926	3	+	23225220	23225220	789624	3	903,88,979,	0,2845,4727,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	23225232	23230915	chr8:23225232-23230915	3	-	23225232	23225232	8553170	2	212,913,	0,4770,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	23225633	23228207	chr8:23225633-23228207	0	+	23225633	23225633	8553170	2	490,142,	0,2432,
#Partially deleted in new
chr8	23243636	23261992	chr8:23243636-23261992	3	+	23246695	23260599	789624	11	208,739,172,186,134,49,120,99,61,180,1455,	0,2619,5573,11610,12823,14396,14693,15095,15429,16507,16901,
#Partially deleted in new
chr8	23246090	23261999	chr8:23246090-23261999	1	+	23246695	23260599	789624	10	904,172,186,134,49,120,99,61,180,1462,	0,3119,9156,10369,11942,12239,12641,12975,14053,14447,
#Partially deleted in new
chr8	23246641	23261992	chr8:23246641-23261992	0	+	23246695	23249320	789624	10	183,172,186,134,49,120,99,61,180,1455,	0,2568,8605,9818,11391,11688,12090,12424,13502,13896,
#Partially deleted in new
chr8	23246658	23258491	chr8:23246658-23258491	0	+	23246658	23246658	8553170	4	336,186,6,162,	0,8588,11417,11671,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	23246658	23255365	chr8:23246658-23255365	0	+	23246695	23255365	789624	3	336,211,119,	0,1328,8588,
#Partially deleted in new
chr8	23246665	23258830	chr8:23246665-23258830	0	+	23246695	23256466	789624	6	329,186,134,49,120,99,	0,8581,9794,11367,11664,12066,
#Partially deleted in new
chr8	23254805	23262000	chr8:23254805-23262000	0	+	23254805	23254805	8553170	7	627,134,49,120,99,180,1463,	0,1654,3227,3524,3926,5338,5732,
#Partially deleted in new
chr8	23256602	23260286	chr8:23256602-23260286	0	+	23256602	23256602	8553170	6	83,49,120,99,61,143,	0,1430,1727,2129,2463,3541,
#Deleted in new
chr8	23259892	23260587	chr8:23259892-23260587	0	+	23259892	23259892	8553170	2	431,50,	0,645,
#Partially deleted in new
chr8	23270119	23289034	chr8:23270119-23289034	0	+	23288523	23289034	789624	3	124,128,19,	0,18386,18896,
#Partially deleted in new
chr8	23287907	23296279	chr8:23287907-23296279	1	+	23288523	23296097	789624	8	250,128,138,604,173,71,96,313,	0,598,1108,1958,3453,5395,6861,8059,
#Partially deleted in new
chr8	23287907	23296121	chr8:23287907-23296121	0	+	23288523	23290338	789624	9	250,128,138,354,135,173,71,96,155,	0,598,1108,1958,2427,3453,5395,6861,8059,
#Partially deleted in new
chr8	23287907	23296121	chr8:23287907-23296121	1	+	23288523	23296097	789624	9	250,128,138,60,418,173,71,96,155,	0,598,1108,1958,2144,3453,5395,6861,8059,
#Partially deleted in new
chr8	23287928	23296121	chr8:23287928-23296121	3	+	23287928	23296097	789624	9	39,63,128,138,604,173,71,96,155,	0,166,577,1087,1937,3432,5374,6840,8038,
#Partially deleted in new
chr8	23288123	23291468	chr8:23288123-23291468	0	+	23288523	23291468	789624	5	34,128,111,604,108,	0,382,919,1742,3237,
#Partially deleted in new
chr8	23288183	23290288	chr8:23288183-23290288	0	+	23288523	23290288	789624	4	92,128,138,423,	0,322,832,1682,
#Partially deleted in new
chr8	23288421	23290468	chr8:23288421-23290468	0	+	23288523	23290468	789624	3	212,138,603,	0,594,1444,
#Partially deleted in new
chr8	23290412	23295630	chr8:23290412-23295630	0	+	23290412	23295508	789624	5	57,173,71,96,172,	0,948,2890,4356,5046,
#Partially deleted in new
chr8	23290975	23293373	chr8:23290975-23293373	0	+	23290975	23290975	8553170	2	558,71,	0,2327,
#Partially deleted in new
chr8	23297188	23404240	chr8:23297188-23404240	3	-	23298042	23368351	0	14	934,112,137,116,244,166,168,152,184,223,212,176,438,287,	0,1647,4838,6093,12479,19760,22696,24941,31193,36212,43803,62901,70808,106765,
#Partially deleted in new
chr8	23316733	23320005	chr8:23316733-23320005	0	-	23316733	23316733	8553170	2	381,121,	0,3151,
#Partially deleted in new
chr8	23316983	23404126	chr8:23316983-23404126	0	-	23316983	23368351	789624	3	128,258,173,	0,51193,86970,
#Partially deleted in new
chr8	23319884	23341176	chr8:23319884-23341176	0	-	23328546	23341176	789624	4	168,152,184,185,	0,2245,8497,21107,
#Partially deleted in new
chr8	23319884	23333495	chr8:23319884-23333495	0	-	23319884	23333495	789624	4	168,152,205,95,	0,2245,8497,13516,
#Partially deleted in new
chr8	23319926	23328768	chr8:23319926-23328768	0	-	23319926	23319926	8553170	3	126,152,387,	0,2203,8455,
#Partially deleted in new
chr8	23319960	23329115	chr8:23319960-23329115	0	-	23319960	23319960	8553170	4	92,152,184,143,	0,2169,8421,9012,
#Partially deleted in new
chr8	23321736	23333636	chr8:23321736-23333636	0	-	23321736	23321736	8553170	3	545,184,236,	0,6645,11664,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	23331436	23333553	chr8:23331436-23333553	0	-	23331436	23331436	8553170	2	572,153,	0,1964,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	23336170	23341536	chr8:23336170-23341536	0	+	23336170	23336170	8553170	2	1287,511,	0,4855,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	23336207	23366125	chr8:23336207-23366125	3	+	23336207	23336207	789624	3	1250,124,3000,	0,4818,26918,
#Partially deleted in new
chr8	23360089	23425328	chr8:23360089-23425328	0	-	23360089	23425090	789624	3	176,438,278,	0,7907,64961,
#Partially deleted in new
chr8	23360089	23425291	chr8:23360089-23425291	0	-	23360089	23425090	789624	4	176,438,120,241,	0,7907,43864,64961,
#Partially deleted in new
chr8	23360165	23371126	chr8:23360165-23371126	0	-	23360165	23368351	789624	3	100,438,50,	0,7831,10911,
#Partially deleted in new
chr8	23368064	23404226	chr8:23368064-23404226	0	-	23368064	23368351	789624	3	370,120,273,	0,2578,35889,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr8	23385782	23457695	chr8:23385782-23457695	1	-	23385927	23449900	789624	13	263,162,86,325,167,131,60,104,151,206,198,105,139,	0,48534,49609,51151,53966,55810,56224,58067,58673,61897,62959,64110,71774,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	23385782	23437092	chr8:23385782-23437092	0	-	23385927	23437092	789624	5	263,120,162,86,159,	0,18171,48534,49609,51151,
#Partially deleted in new
chr8	23402605	23436977	chr8:23402605-23436977	0	-	23402605	23402605	8553170	5	167,120,162,86,44,	0,1348,31711,32786,34328,
#Partially deleted in new
chr8	23403905	23425301	chr8:23403905-23425301	0	-	23403905	23403905	8553170	2	168,251,	0,21145,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr8	23429151	23457695	chr8:23429151-23457695	3	-	23432925	23449900	789624	13	4003,162,86,325,167,155,60,104,151,206,198,105,139,	0,5165,6240,7782,10597,12417,12855,14698,15304,18528,19590,20741,28405,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	23432645	23434738	chr8:23432645-23434738	0	-	23432645	23432645	8553170	2	509,422,	0,1671,
#Partially deleted in new
chr8	23432925	23457695	chr8:23432925-23457695	1	-	23432925	23449900	789624	13	229,162,86,325,167,131,60,104,151,206,198,105,139,	0,1391,2466,4008,6823,8667,9081,10924,11530,14754,15816,16967,24631,
#Partially deleted in new
chr8	23434092	23457639	chr8:23434092-23457639	0	-	23434092	23434092	8553170	12	386,86,325,167,155,60,104,151,206,198,105,83,	0,1299,2841,5656,7476,7914,9757,10363,13587,14649,15800,23464,
#Deleted in new
chr8	23434414	23437153	chr8:23434414-23437153	0	-	23434414	23434414	8553170	3	267,86,220,	0,977,2519,
#Deleted in new
chr8	23437033	23440084	chr8:23437033-23440084	0	-	23437033	23437033	8553170	2	225,336,	0,2715,
#Partially deleted in new
chr8	23442006	23447787	chr8:23442006-23447787	0	-	23442006	23447787	789624	4	60,104,79,108,	0,1843,2449,5673,
#Partially deleted in new
chr8	23444535	23457647	chr8:23444535-23457647	0	-	23444535	23448845	789624	4	71,206,198,91,	0,3144,4206,13021,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	23458600	23484971	chr8:23458600-23484971	3	+	23458600	23458600	8553170	2	491,139,	0,26232,
#Deleted in new
chr8	23483015	23483534	chr8:23483015-23483534	7	-	23483015	23483015	16724991	1	519,	0,
#Deleted in new
chr8	23493008	23494198	chr8:23493008-23494198	3	-	23493008	23493008	8553170	2	320,395,	0,795,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	23528804	23575463	chr8:23528804-23575463	3	+	23529002	23571855	789624	4	408,229,57,4129,	0,37303,39517,42530,
#Partially deleted in new
chr8	23528955	23572203	chr8:23528955-23572203	0	+	23529002	23566365	789624	4	257,706,57,869,	0,37152,39366,42379,
#Partially deleted in new
chr8	23528955	23571463	chr8:23528955-23571463	0	+	23529002	23568299	789624	4	257,229,120,129,	0,37152,39303,42379,
#Partially deleted in new
chr8	23528966	23572221	chr8:23528966-23572221	0	+	23528966	23528966	8553170	3	246,2271,887,	0,37141,42368,
#Deleted in new
chr8	23528974	23531925	chr8:23528974-23531925	0	+	23528974	23528974	8553170	2	238,241,	0,2710,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	23529052	23568965	chr8:23529052-23568965	0	+	23529052	23529052	8553170	2	160,2858,	0,37055,
#Partially deleted in new
chr8	23529059	23571858	chr8:23529059-23571858	0	+	23529059	23571497	789624	4	153,229,57,384,	0,37048,39262,42415,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	23541469	23572203	chr8:23541469-23572203	0	+	23541469	23541469	8553170	4	387,124,2271,869,	0,1618,24638,29865,
#Partially deleted in new
chr8	23541561	23566385	chr8:23541561-23566385	0	+	23541561	23541561	8553170	2	295,278,	0,24546,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	23541686	23566378	chr8:23541686-23566378	0	+	23541686	23541686	8553170	3	153,124,271,	0,1401,24421,
#Partially deleted in new
chr8	23566682	23571590	chr8:23566682-23571590	0	+	23566682	23566682	8553170	3	258,57,256,	0,1639,4652,
#Partially deleted in new
chr8	23566775	23571590	chr8:23566775-23571590	0	+	23566775	23566775	8553170	3	190,57,256,	0,1546,4559,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	23600025	23600138	chr8:23600025-23600138	3	-	23600025	23600025	8553170	1	113,	0,
#Deleted in new
chr8	23634875	23635507	chr8:23634875-23635507	7	-	23634875	23634875	16724991	1	632,	0,
#Deleted in new
chr8	23678692	23682927	chr8:23678692-23682927	3	-	23681220	23682889	0	2	2947,324,	0,3911,
#Deleted in new
chr8	23680987	23682889	chr8:23680987-23682889	1	-	23681220	23682889	0	3	652,28,33,	0,1616,1869,
#Partially deleted in new
chr8	23702450	23706598	chr8:23702450-23706598	3	-	23702450	23706598	789624	2	632,274,	0,3874,
#Partially deleted in new
chr8	23707140	23789487	chr8:23707140-23789487	3	+	23707140	23707140	8553170	3	75,111,66,	0,81352,82281,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	23726330	23743042	chr8:23726330-23743042	3	-	23726330	23726330	8553170	3	281,112,50,	0,6218,16662,
#Deleted in new
chr8	23805932	23806154	chr8:23805932-23806154	7	-	23805932	23805932	16724991	1	222,	0,
#Deleted in new
chr8	23806228	23806377	chr8:23806228-23806377	3	-	23806228	23806228	8553170	1	149,	0,
#Partially deleted in new
chr8	23841914	23854807	chr8:23841914-23854807	3	-	23844769	23854523	789624	4	3126,212,143,402,	0,9405,10327,12491,
#Partially deleted in new
chr8	23843913	23854311	chr8:23843913-23854311	1	-	23844769	23852295	789624	4	1127,212,143,266,	0,7406,8328,10132,
#Partially deleted in new
chr8	24169956	24177080	chr8:24169956-24177080	3	-	24169956	24169956	8553170	3	159,271,61,	0,4141,7063,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr8	24294039	24359018	chr8:24294039-24359018	3	+	24294149	24354404	789624	23	156,104,77,79,77,193,72,72,170,82,131,178,90,196,103,160,81,79,109,79,66,63,4635,	0,5934,15854,16123,17321,19348,26196,27178,29794,32514,35945,37110,38620,41406,45426,47558,49061,49466,55824,57192,57947,59730,60344,
#Partially deleted in new
chr8	24294068	24354472	chr8:24294068-24354472	0	+	24294149	24321320	789624	23	127,104,77,79,77,193,72,134,170,82,131,178,90,196,103,160,81,83,109,79,66,63,89,	0,5905,15825,16094,17292,19319,26167,27246,29765,32485,35916,37081,38591,41377,45397,47529,49032,49437,55795,57163,57918,59701,60315,
#Partially deleted in new
chr8	24294068	24311427	chr8:24294068-24311427	0	+	24294149	24308667	789624	6	127,104,128,77,79,67,	0,5905,14572,15825,16094,17292,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr8	24294110	24336120	chr8:24294110-24336120	1	+	24294149	24335697	789624	14	85,104,77,79,77,193,72,72,170,82,131,178,90,675,	0,5863,15783,16052,17250,19277,26125,27107,29723,32443,35874,37039,38549,41335,
#Partially deleted in new
chr8	24299842	24310372	chr8:24299842-24310372	0	+	24299842	24299842	8553170	3	235,77,210,	0,10051,10320,
#Partially deleted in new
chr8	24322607	24332680	chr8:24322607-24332680	0	+	24322607	24322607	8553170	6	54,170,82,131,178,21,	0,1226,3946,7377,8542,10052,
#Partially deleted in new
chr8	24325036	24332725	chr8:24325036-24332725	0	+	24325036	24325036	8553170	5	53,82,131,178,66,	0,1517,4948,6113,7623,
#Partially deleted in new
chr8	24331149	24355070	chr8:24331149-24355070	0	+	24331149	24354404	789624	11	178,90,196,103,160,81,79,109,79,66,687,	0,1510,4296,8316,10448,11951,12356,18714,20082,20837,23234,
#Partially deleted in new
chr8	24340868	24349885	chr8:24340868-24349885	0	+	24340868	24340868	8553170	4	889,81,79,22,	0,2232,2637,8995,
#Partially deleted in new
chr8	24341651	24351540	chr8:24341651-24351540	0	+	24341651	24351379	789624	5	106,81,79,109,309,	0,1449,1854,8212,9580,
#Partially deleted in new
chr8	24342959	24351483	chr8:24342959-24351483	0	+	24342959	24342959	8553170	3	222,79,252,	0,546,8272,
#Partially deleted in new
chr8	24346947	24351508	chr8:24346947-24351508	0	+	24346947	24346947	8553170	3	85,109,277,	0,2916,4284,
#Partially deleted in new
chr8	24384284	24406013	chr8:24384284-24406013	3	+	24384504	24405298	789624	14	308,119,77,79,77,187,63,72,167,82,131,178,86,722,	0,7977,8977,9784,11435,12985,13398,14195,14589,15108,15885,17630,19718,21007,
#Partially deleted in new
chr8	24384469	24406013	chr8:24384469-24406013	1	+	24393291	24405298	789624	13	123,77,79,77,187,63,72,167,82,131,178,86,722,	0,8792,9599,11250,12800,13213,14010,14404,14923,15700,17445,19533,20822,
#Partially deleted in new
chr8	24384504	24405717	chr8:24384504-24405717	0	+	24384504	24390166	789624	15	88,90,119,77,79,77,187,63,72,167,82,131,178,86,426,	0,5624,7757,8757,9564,11215,12765,13178,13975,14369,14888,15665,17410,19498,20787,
#Deleted in new
chr8	24405291	24406012	chr8:24405291-24406012	0	+	24405291	24405291	8553170	2	153,479,	0,242,
#Partially deleted in new
chr8	24440929	24467647	chr8:24440929-24467647	1	+	24441108	24467042	789624	6	231,104,77,79,77,849,	0,1543,6256,22952,24769,25869,
#Partially deleted in new
chr8	24441025	24509565	chr8:24441025-24509565	3	+	24441108	24508546	789624	22	135,104,77,79,77,190,54,72,170,85,131,175,90,196,103,187,81,79,106,100,56,1020,	0,1447,6160,22856,24673,25773,27741,35407,41116,44251,46161,48133,49773,50877,51469,52017,58210,59152,59764,60451,66454,67520,
#Partially deleted in new
chr8	24441083	24509548	chr8:24441083-24509548	1	+	24441108	24508546	789624	23	77,104,77,79,77,190,54,72,170,85,131,175,90,196,103,187,81,79,106,100,66,56,1003,	0,1389,6102,22798,24615,25715,27683,35349,41058,44193,46103,48075,49715,50819,51411,51959,58152,59094,59706,60393,65007,66396,67462,
#Partially deleted in new
chr8	24475903	24526970	chr8:24475903-24526970	1	+	24476483	24526781	789624	15	79,72,170,85,131,175,90,196,103,187,81,79,106,100,216,	0,529,6238,9373,11283,13255,14895,15999,16591,17139,23332,24274,24886,25573,50851,
#Partially deleted in new
chr8	24490311	24514828	chr8:24490311-24514828	3	-	24490311	24490311	789624	5	195,301,273,90,43,	0,1548,21359,24263,24474,
#Partially deleted in new
chr8	24511621	24514588	chr8:24511621-24514588	0	-	24511621	24511621	8553170	2	322,181,	0,2786,
#Partially deleted in new
chr8	24511621	24514829	chr8:24511621-24514829	1	-	24511621	24511621	8553170	2	322,255,	0,2953,
#Partially deleted in new
chr8	24511629	24514813	chr8:24511629-24514813	0	-	24511629	24511629	8553170	3	314,90,28,	0,2945,3156,
#Deleted in new
chr8	24912164	24914717	chr8:24912164-24914717	3	-	24912164	24912164	8553170	1	2553,	0,
#Deleted in new
chr8	24913011	24919093	chr8:24913011-24919093	3	+	24913793	24918606	789624	3	1862,125,2033,	0,2593,4049,
#Deleted in new
chr8	24913757	24915692	chr8:24913757-24915692	0	+	24913757	24913757	8553170	3	47,447,88,	0,669,1847,
#Deleted in new
chr8	24913760	24918976	chr8:24913760-24918976	1	+	24913793	24918606	789624	4	1113,125,556,706,	0,1844,3300,4510,
#Deleted in new
chr8	24913763	24919090	chr8:24913763-24919090	1	+	24913793	24918606	789624	4	1110,125,671,1242,	0,1841,3297,4085,
#Deleted in new
chr8	24913763	24918615	chr8:24913763-24918615	0	+	24913763	24913763	8553170	4	1110,125,352,298,	0,1841,3297,4554,
#Deleted in new
chr8	24914941	24919098	chr8:24914941-24919098	1	+	24915652	24918606	789624	3	356,125,2038,	0,663,2119,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	24950954	24957110	chr8:24950954-24957110	3	-	24952809	24956515	789624	4	1998,320,125,1639,	0,2521,3226,4517,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	24950957	24956515	chr8:24950957-24956515	1	-	24954218	24956515	789624	5	1995,320,125,171,594,	0,2518,3223,4514,4964,
#Deleted in new
chr8	24952379	24956612	chr8:24952379-24956612	1	-	24954214	24956515	789624	6	573,320,40,84,173,689,	0,1096,1801,1842,3092,3544,
#Deleted in new
chr8	24953795	24953867	chr8:24953795-24953867	3	-	24953795	24953795	5263520	1	72,	0,
#Deleted in new
chr8	24955224	24956721	chr8:24955224-24956721	0	-	24955224	24955224	8553170	1	1497,	0,
#Deleted in new
chr8	24956620	24957110	chr8:24956620-24957110	3	+	24956620	24956620	8553170	1	490,	0,
#Partially deleted in new
chr8	24992001	25009777	chr8:24992001-25009777	3	+	24992001	24992001	8553170	3	349,194,60,	0,16392,17716,
#Partially deleted in new
chr8	25141393	25141968	chr8:25141393-25141968	7	-	25141393	25141393	16724991	1	575,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	25184722	25271221	chr8:25184722-25271221	1	+	25184908	25270873	789624	4	229,84,41,432,	0,58951,84122,86067,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr8	25184771	25305307	chr8:25184771-25305307	1	+	25184908	25304331	789624	11	180,84,41,56,97,149,136,158,82,130,1053,	0,58902,84073,90614,93797,107252,111741,114172,115804,117553,119483,
#Partially deleted in new
chr8	25184864	25415716	chr8:25184864-25415716	3	+	25184908	25411298	789624	52	87,84,41,56,97,149,136,158,82,130,73,143,126,125,99,73,104,184,98,90,101,135,112,71,107,137,96,99,95,79,101,59,155,86,160,41,91,120,90,105,142,82,85,87,177,84,138,167,172,139,104,4523,	0,58809,83980,90521,93704,107159,111648,114079,115711,117460,119390,123918,125542,132142,134713,136115,138983,140499,147386,147738,149231,151374,156012,156874,157536,160610,166866,174098,178182,179761,182005,183327,183706,184691,187694,188753,189699,192440,195440,197809,204226,205341,207031,207931,210678,215046,216064,218693,223118,223937,225234,226329,
#Partially deleted in new
chr8	25276944	25277476	chr8:25276944-25277476	7	-	25276944	25276944	16724991	1	532,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	25296581	25299470	chr8:25296581-25299470	0	+	25296581	25296581	8553170	2	67,527,	0,2362,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr8	25298941	25376859	chr8:25298941-25376859	0	+	25298941	25374795	789624	29	160,130,73,143,126,125,99,73,104,184,98,90,101,135,112,71,107,137,96,99,95,79,101,59,155,86,160,41,2296,	0,3383,5313,9841,11465,18065,20636,22038,24906,26422,33309,33661,35154,37297,41935,42797,43459,46533,52789,60021,64105,65684,67928,69250,69629,70614,73617,74676,75622,
#Partially deleted in new
chr8	25308738	25310507	chr8:25308738-25310507	0	+	25308738	25308738	8553170	2	187,101,	0,1668,
#Partially deleted in new
chr8	25310467	25317370	chr8:25310467-25317370	0	+	25310467	25310467	8553170	2	65,364,	0,6539,
#Partially deleted in new
chr8	25325425	25412256	chr8:25325425-25412256	0	+	25325425	25336283	789624	36	122,98,90,101,94,112,71,107,137,96,99,95,79,101,59,117,86,160,41,91,120,90,105,133,142,82,85,87,177,84,138,167,172,139,104,1063,	0,6825,7177,8670,10854,15451,16313,16975,20049,26305,33537,37621,39200,41444,42766,43145,44130,47133,48192,49138,51879,54879,57248,63383,63665,64780,66470,67370,70117,74485,75503,78132,82557,83376,84673,85768,
#Deleted in new
chr8	25345401	25345474	chr8:25345401-25345474	3	+	25345401	25345401	5263520	1	73,	0,
#Partially deleted in new
chr8	25351392	25364777	chr8:25351392-25364777	0	+	25351392	25351392	8553170	4	434,99,95,152,	0,7570,11654,13233,
#Partially deleted in new
chr8	25391888	25395822	chr8:25391888-25395822	0	+	25391888	25391888	8553170	3	92,87,280,	0,907,3654,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	25409431	25412258	chr8:25409431-25412258	0	+	25409431	25409431	8553170	2	771,1065,	0,1762,
#Partially deleted in new
chr8	25409996	25418082	chr8:25409996-25418082	0	+	25409996	25409996	8553170	3	206,685,151,	0,1197,7935,
#Partially deleted in new
chr8	25419259	25424231	chr8:25419259-25424231	1	-	25419418	25423330	0	4	201,96,142,31,	0,2313,3930,4941,
#Partially deleted in new
chr8	25419261	25424654	chr8:25419261-25424654	3	-	25419418	25423330	0	3	199,96,1465,	0,2311,3928,
#Partially deleted in new
chr8	25427846	25458467	chr8:25427846-25458467	3	-	25429856	25458246	0	12	2127,134,106,150,96,68,129,59,97,44,122,269,	0,4657,5483,7516,8388,8571,11432,11759,12730,16445,18282,30352,
#Partially deleted in new
chr8	25429261	25458476	chr8:25429261-25458476	0	-	25446124	25458246	789624	11	712,134,106,150,96,68,129,187,97,171,278,	0,3242,4068,6101,6973,7156,10017,10344,11315,16818,28937,
#Partially deleted in new
chr8	25435432	25458387	chr8:25435432-25458387	0	-	25440654	25458246	789624	8	80,96,68,129,59,97,122,189,	0,802,985,3846,4173,5144,10696,22766,
#Partially deleted in new
chr8	25436261	25458306	chr8:25436261-25458306	0	-	25436261	25436261	8553170	6	69,68,129,59,97,108,	0,156,3017,3344,4315,21937,
#Partially deleted in new
chr8	25439355	25458412	chr8:25439355-25458412	0	-	25439355	25439355	8553170	7	52,187,97,122,102,75,214,	0,250,1221,6773,11024,12113,18843,
#Partially deleted in new
chr8	25439609	25458431	chr8:25439609-25458431	0	-	25439609	25439609	8553170	5	183,97,44,122,233,	0,967,4682,6519,18589,
#Partially deleted in new
chr8	25439628	25457417	chr8:25439628-25457417	0	-	25439628	25439628	8553170	4	164,97,122,117,	0,948,6500,17672,
#Partially deleted in new
chr8	25440542	25458442	chr8:25440542-25458442	0	-	25440542	25440542	8553170	4	131,44,122,244,	0,3749,5586,17656,
#Partially deleted in new
chr8	25440623	25458280	chr8:25440623-25458280	0	-	25440623	25440623	8553170	5	50,44,122,102,82,	0,3668,5505,9756,17575,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	25446149	25450611	chr8:25446149-25450611	0	-	25446149	25446149	8553170	2	101,232,	0,4230,
#Partially deleted in new
chr8	25450378	25457754	chr8:25450378-25457754	0	-	25450378	25450378	8553170	2	103,454,	0,6922,
#Partially deleted in new
chr8	25458996	25507920	chr8:25458996-25507920	3	+	25460239	25507738	0	15	477,61,171,155,151,197,85,212,88,245,79,89,138,172,1411,	0,1243,1387,3057,7178,9220,10899,20916,24402,24969,26762,28249,29555,44376,47513,
#Partially deleted in new
chr8	25459198	25507873	chr8:25459198-25507873	1	+	25460367	25507738	789624	14	275,315,155,151,197,85,212,88,245,79,89,138,172,1364,	0,1041,2855,6976,9018,10697,20714,24200,24767,26560,28047,29353,44174,47311,
#Partially deleted in new
chr8	25459198	25462071	chr8:25459198-25462071	0	+	25459198	25459198	8553170	3	275,171,18,	0,1185,2855,
#Partially deleted in new
chr8	25468270	25485835	chr8:25468270-25485835	0	+	25468270	25468270	8553170	7	143,85,72,212,88,245,77,	0,1625,3842,11642,15128,15695,17488,
#Partially deleted in new
chr8	25479691	25507873	chr8:25479691-25507873	0	+	25479691	25479691	8553170	9	22,212,88,245,79,89,138,172,1364,	0,221,3707,4274,6067,7554,8860,23681,26818,
#Partially deleted in new
chr8	25685797	25687524	chr8:25685797-25687524	3	+	25685797	25685797	8553170	2	115,1016,	0,711,
#Partially deleted in new
chr8	25820974	25833464	chr8:25820974-25833464	3	-	25820974	25820974	8553170	3	1028,136,218,	0,11825,12272,
#Partially deleted in new
chr8	25834128	25840135	chr8:25834128-25840135	3	-	25834128	25834128	8553170	2	314,171,	0,5836,
#Partially deleted in new
chr8	25841729	26045397	chr8:25841729-26045397	3	-	25844608	26044859	789624	16	2911,168,186,178,66,89,127,131,118,82,69,74,56,64,157,669,	0,8864,16589,19319,19579,20979,45025,46112,48022,66744,191355,198298,198886,199209,200365,202999,
#Partially deleted in new
chr8	25844361	26041488	chr8:25844361-26041488	1	-	25844608	26040065	789624	15	279,168,186,178,66,89,127,131,118,82,69,74,56,64,201,	0,6232,13957,16687,16947,18347,42393,43480,45390,64112,188723,195666,196254,196577,196926,
#Partially deleted in new
chr8	25844608	25887916	chr8:25844608-25887916	1	-	25858080	25887916	789624	9	32,168,96,186,178,66,89,127,75,	0,5985,13450,13710,16440,16700,18100,42146,43233,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	26031449	26045178	chr8:26031449-26045178	0	-	26031449	26031449	8553170	6	1704,74,56,64,157,450,	0,8578,9166,9489,10645,13279,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	26136879	26136998	chr8:26136879-26136998	7	+	26136879	26136879	16724991	1	119,	0,
#Partially deleted in new
chr8	26254882	26256628	chr8:26254882-26256628	7	-	26254882	26254882	16724991	2	913,486,	0,1260,
#Partially deleted in new
chr8	26291490	26372680	chr8:26291490-26372680	3	+	26291819	26370413	0	10	336,75,98,166,113,178,165,170,92,2547,	0,2175,47399,62977,68678,69483,71193,72230,74824,78643,
#Partially deleted in new
chr8	26291527	26354630	chr8:26291527-26354630	0	+	26291819	26293814	789624	4	299,195,98,163,	0,2138,47362,62940,
#Partially deleted in new
chr8	26291527	26360281	chr8:26291527-26360281	0	+	26291819	26333505	789624	6	299,75,85,98,166,113,	0,2138,41958,47362,62940,68641,
#Partially deleted in new
chr8	26291538	26370324	chr8:26291538-26370324	0	+	26362709	26370324	789624	6	115,51,165,170,92,191,	0,69562,71145,72182,74776,78595,
#Partially deleted in new
chr8	26291613	26361012	chr8:26291613-26361012	0	+	26291819	26358959	789624	7	213,75,98,166,126,113,39,	0,2052,47276,62854,67293,68555,69360,
#Partially deleted in new
chr8	26291834	26361001	chr8:26291834-26361001	0	+	26360991	26361001	8553170	6	173,75,98,166,113,28,	0,1831,47055,62633,68334,69139,
#Partially deleted in new
chr8	26292112	26339973	chr8:26292112-26339973	0	+	26292112	26292112	8553170	4	329,75,98,71,	0,1553,46777,47790,
#Partially deleted in new
chr8	26292116	26339973	chr8:26292116-26339973	0	+	26292116	26292116	8553170	5	325,75,85,98,71,	0,1549,41369,46773,47786,
#Partially deleted in new
chr8	26292118	26354550	chr8:26292118-26354550	0	+	26292118	26292118	8553170	4	323,75,98,83,	0,1547,46771,62349,
#Partially deleted in new
chr8	26293111	26361007	chr8:26293111-26361007	0	+	26360991	26361007	8553170	6	43,75,98,166,113,34,	0,554,45778,61356,67057,67862,
#Partially deleted in new
chr8	26293205	26360237	chr8:26293205-26360237	0	+	26293205	26293205	8553170	5	161,75,98,166,69,	0,460,45684,61262,66963,
#Partially deleted in new
chr8	26293215	26370886	chr8:26293215-26370886	1	+	26293246	26370413	0	10	68,75,98,166,113,178,165,170,92,753,	0,450,45674,61252,66953,67758,69468,70505,73099,76918,
#Partially deleted in new
chr8	26293215	26360182	chr8:26293215-26360182	0	+	26293215	26293215	8553170	6	151,75,98,71,166,14,	0,450,45674,46687,61252,66953,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	26293216	26354637	chr8:26293216-26354637	0	+	26293216	26293216	8553170	5	150,75,98,83,170,	0,449,45673,57382,61251,
#Partially deleted in new
chr8	26293482	26361033	chr8:26293482-26361033	0	+	26360991	26361033	789624	6	89,75,98,166,113,60,	0,183,45407,60985,66686,67491,
#Partially deleted in new
chr8	26293571	26361085	chr8:26293571-26361085	0	+	26293571	26293571	8553170	5	169,98,166,113,112,	0,45318,60896,66597,67402,
#Partially deleted in new
chr8	26293589	26360238	chr8:26293589-26360238	0	+	26293589	26293589	8553170	5	151,98,71,166,70,	0,45300,46313,60878,66579,
#Partially deleted in new
chr8	26298574	26361044	chr8:26298574-26361044	0	+	26298574	26298574	8553170	6	34,85,98,166,113,71,	0,34911,40315,55893,61594,62399,
#Partially deleted in new
chr8	26338888	26358959	chr8:26338888-26358959	1	+	26338888	26358959	789624	3	99,166,53,	0,15579,20018,
#Partially deleted in new
chr8	26339918	26360235	chr8:26339918-26360235	0	+	26339918	26339918	8553170	4	55,166,121,67,	0,14549,18993,20250,
#Partially deleted in new
chr8	26354418	26370363	chr8:26354418-26370363	0	+	26354418	26354418	8553170	7	215,113,178,165,170,92,230,	0,5750,6555,8265,9302,11896,15715,
#Partially deleted in new
chr8	26360599	26370391	chr8:26360599-26370391	0	+	26360599	26360599	8553170	5	552,165,170,92,258,	0,2084,3121,5715,9534,
#Partially deleted in new
chr8	26361089	26371129	chr8:26361089-26371129	0	+	26361089	26361089	8553170	4	62,1207,92,996,	0,1594,5225,9044,
#Partially deleted in new
chr8	26365097	26370314	chr8:26365097-26370314	0	+	26365097	26365097	8553170	2	1309,181,	0,5036,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	26375912	26382941	chr8:26375912-26382941	7	-	26375912	26375912	16724991	3	736,67,631,	0,5887,6398,
#Deleted in new
chr8	26379258	26382953	chr8:26379258-26382953	5	-	26379258	26379258	16724991	2	2608,566,	0,3129,
#Deleted in new
chr8	26379391	26381519	chr8:26379391-26381519	5	-	26379391	26379391	16724991	2	1858,193,	0,1935,
#Partially deleted in new
chr8	26382897	26413129	chr8:26382897-26413129	3	+	26383130	26410412	789624	6	333,184,73,104,150,2766,	0,8345,12332,25102,25329,27466,
#Partially deleted in new
chr8	26383053	26410854	chr8:26383053-26410854	0	+	26383130	26408082	789624	4	177,104,150,491,	0,24946,25173,27310,
#Partially deleted in new
chr8	26383196	26505636	chr8:26383196-26505636	0	+	26383196	26505319	789624	6	34,184,73,104,150,330,	0,8046,12033,24803,25030,122110,
#Partially deleted in new
chr8	26383377	26410666	chr8:26383377-26410666	1	+	26391262	26410412	789624	6	101,184,73,104,150,303,	0,7865,11852,24622,24849,26986,
#Partially deleted in new
chr8	26383414	26410509	chr8:26383414-26410509	1	+	26391262	26410412	789624	6	82,184,73,104,150,146,	0,7828,11815,24585,24812,26949,
#Partially deleted in new
chr8	26390361	26411048	chr8:26390361-26411048	1	+	26391262	26410412	789624	6	156,184,73,104,150,685,	0,881,4868,17638,17865,20002,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	26422592	26423929	chr8:26422592-26423929	3	+	26422592	26422592	8553170	2	257,251,	0,1086,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	26433028	26434065	chr8:26433028-26434065	7	-	26433028	26433028	16724991	2	78,591,	0,446,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	26440490	26442595	chr8:26440490-26442595	3	+	26440490	26440490	8553170	4	214,80,116,158,	0,681,1589,1947,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	26504685	26514092	chr8:26504685-26514092	3	-	26507660	26508755	789624	3	4558,130,277,	0,4862,9130,
#Partially deleted in new
chr8	26508812	26513883	chr8:26508812-26513883	0	-	26508812	26508812	8553170	3	431,77,68,	0,788,5003,
#Partially deleted in new
chr8	26508858	26513900	chr8:26508858-26513900	0	-	26508858	26508858	8553170	3	385,125,85,	0,689,4957,
#Partially deleted in new
chr8	26508864	26513015	chr8:26508864-26513015	0	-	26508864	26508864	8553170	3	379,130,81,	0,683,4070,
#Partially deleted in new
chr8	26508888	26512967	chr8:26508888-26512967	0	-	26508888	26508888	8553170	3	355,130,140,	0,659,3939,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	26508960	26513872	chr8:26508960-26513872	0	-	26508960	26508960	8553170	4	283,125,122,57,	0,587,2688,4855,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	26509011	26514092	chr8:26509011-26514092	0	-	26509011	26509011	8553170	4	232,130,122,277,	0,536,2637,4804,
#Partially deleted in new
chr8	26509171	26513872	chr8:26509171-26513872	0	-	26509171	26509171	8553170	2	506,57,	0,4644,
#Partially deleted in new
chr8	26514021	26658173	chr8:26514021-26658173	1	+	26514325	26655706	789624	14	658,89,185,165,62,81,69,121,157,142,171,180,166,2559,	0,67947,69777,110121,112595,113193,113850,120758,129417,129928,133608,138235,139210,141593,
#Partially deleted in new
chr8	26547668	26548463	chr8:26547668-26548463	7	+	26547668	26547668	16724991	1	795,	0,
#Partially deleted in new
chr8	26577061	26583965	chr8:26577061-26583965	0	+	26577112	26583965	789624	3	306,89,167,	0,4907,6737,
#Partially deleted in new
chr8	26577842	26658178	chr8:26577842-26658178	3	+	26578254	26655706	0	14	451,89,185,165,62,81,69,121,157,142,171,180,166,2564,	0,4126,5956,46300,48774,49372,50029,56937,65596,66107,69787,74414,75389,77772,
#Partially deleted in new
chr8	26578404	26656027	chr8:26578404-26656027	1	+	26582037	26655706	0	14	129,89,185,165,62,81,69,121,157,142,171,180,166,413,	0,3564,5394,45738,48212,48810,49467,56375,65034,65545,69225,73852,74827,77210,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	26619507	26624173	chr8:26619507-26624173	0	+	26619507	26619507	8553170	2	513,31,	0,4635,
#Partially deleted in new
chr8	26623848	26634836	chr8:26623848-26634836	0	+	26623848	26623848	8553170	5	459,62,81,69,57,	0,2768,3366,4023,10931,
#Partially deleted in new
chr8	26627214	26643145	chr8:26627214-26643145	0	+	26627214	26627214	8553170	4	81,69,121,320,	0,657,7565,15611,
#Partially deleted in new
chr8	26637529	26643522	chr8:26637529-26643522	0	+	26637529	26637529	8553170	2	482,84,	0,5909,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	26748149	26865405	chr8:26748149-26865405	1	-	26748589	26864969	789624	3	599,386,1319,	0,22131,115937,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	26748149	26865405	chr8:26748149-26865405	0	-	26859113	26864969	789624	3	599,174,1319,	0,110882,115937,
#Partially deleted in new
chr8	26756395	26865405	chr8:26756395-26865405	1	-	26756758	26864969	789624	3	384,386,1319,	0,13885,107691,
#Partially deleted in new
chr8	26756395	26865405	chr8:26756395-26865405	0	-	26859113	26864969	789624	3	384,174,1319,	0,102636,107691,
#Partially deleted in new
chr8	26756559	26864976	chr8:26756559-26864976	1	-	26757106	26864969	789624	3	562,386,890,	0,13721,107527,
#Partially deleted in new
chr8	26765853	26865169	chr8:26765853-26865169	1	-	26766050	26864969	789624	3	296,386,1083,	0,4427,98233,
#Partially deleted in new
chr8	26769704	26865405	chr8:26769704-26865405	1	-	26770148	26864969	789624	2	962,1319,	0,94382,
#Partially deleted in new
chr8	26770025	26867273	chr8:26770025-26867273	3	-	26770148	26864969	789624	3	641,1569,338,	0,94061,96910,
#Partially deleted in new
chr8	26770209	26854574	chr8:26770209-26854574	0	-	26770209	26770209	8553170	3	457,26,70,	0,83560,84295,
#Deleted in new
chr8	26771789	26772140	chr8:26771789-26772140	7	+	26771789	26771789	16724991	1	351,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	26779052	26865405	chr8:26779052-26865405	1	-	26779284	26864969	789624	2	378,1319,	0,85034,
#Deleted in new
chr8	26835816	26836300	chr8:26835816-26836300	7	-	26835816	26835816	16724991	1	484,	0,
#Deleted in new
chr8	26853729	26854651	chr8:26853729-26854651	0	-	26853729	26853729	8553170	2	659,147,	0,775,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	27010485	27010746	chr8:27010485-27010746	7	+	27010485	27010485	16724991	1	261,	0,
#Deleted in new
chr8	27011146	27012371	chr8:27011146-27012371	7	-	27011146	27011146	16724991	1	1225,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	27048852	27048963	chr8:27048852-27048963	3	-	27048852	27048852	5263520	1	111,	0,
#Deleted in new
chr8	27063995	27065278	chr8:27063995-27065278	7	-	27063995	27063995	16724991	1	1283,	0,
#Partially deleted in new
chr8	27086075	27087783	chr8:27086075-27087783	3	+	27086075	27086075	8553170	2	210,605,	0,1103,
#Partially deleted in new
chr8	27184320	27210494	chr8:27184320-27210494	3	+	27184320	27184320	8553170	3	67,65,453,	0,22134,25721,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	27235322	27258386	chr8:27235322-27258386	3	-	27236845	27243723	789624	7	1583,192,209,81,96,91,36,	0,4648,5731,6354,7074,8388,23028,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	27235884	27258401	chr8:27235884-27258401	1	-	27239258	27242478	789624	6	1021,54,192,209,96,51,	0,3341,4086,5169,6512,22466,
#Partially deleted in new
chr8	27236302	27258409	chr8:27236302-27258409	1	-	27236845	27243723	789624	6	603,192,209,96,91,59,	0,3668,4751,6094,7408,22048,
#Partially deleted in new
chr8	27236474	27258420	chr8:27236474-27258420	1	-	27239258	27243723	789624	8	431,54,192,209,81,96,91,70,	0,2751,3496,4579,5202,5922,7236,21876,
#Partially deleted in new
chr8	27239339	27258404	chr8:27239339-27258404	1	-	27239784	27243723	789624	5	823,209,96,91,54,	0,1714,3057,4371,19011,
#Partially deleted in new
chr8	27239689	27258404	chr8:27239689-27258404	1	-	27239784	27243723	789624	6	473,209,81,96,91,54,	0,1364,1987,2707,4021,18661,
#Partially deleted in new
chr8	27241167	27258398	chr8:27241167-27258398	0	-	27241167	27241167	8553170	5	95,81,383,91,48,	0,509,942,2543,17183,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	27284886	27311319	chr8:27284886-27311319	3	-	27287549	27311235	789624	6	3241,119,23,231,96,519,	0,4275,5269,9193,13577,25914,
#Partially deleted in new
chr8	27285808	27294135	chr8:27285808-27294135	0	-	27286125	27294135	789624	5	329,92,119,23,56,	0,2227,3353,4347,8271,
#Partially deleted in new
chr8	27287700	27311238	chr8:27287700-27311238	1	-	27288111	27311235	789624	4	427,119,231,438,	0,1461,6379,23100,
#Partially deleted in new
chr8	27294039	27310856	chr8:27294039-27310856	0	-	27294039	27294039	8553170	3	271,96,56,	0,4424,16761,
#Boundary problem: need 36, got 0, diff 36, mapped 0.0
chr8	27311481	27459390	chr8:27311481-27459390	3	+	27397584	27458509	0	36	228,84,83,98,160,118,241,179,88,80,63,55,141,75,102,118,40,47,51,98,85,101,116,101,90,205,109,66,126,147,36,25,47,138,81,1097,	0,822,1723,10920,11785,14082,86066,108413,109175,110822,118611,118882,119394,119916,120778,121953,122611,123031,124261,124769,125640,125914,126283,127549,127827,128755,131393,132724,134312,139267,139561,140003,141632,142672,143049,146812,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	27311566	27322817	chr8:27311566-27322817	0	+	27311566	27311566	8553170	5	143,84,83,98,151,	0,737,1638,10835,11100,
#Partially deleted in new
chr8	27311628	27397789	chr8:27311628-27397789	0	+	27397584	27397789	789624	4	81,98,118,242,	0,10773,13935,85919,
#Partially deleted in new
chr8	27325344	27420001	chr8:27325344-27420001	0	+	27397584	27420001	789624	4	88,118,241,107,	0,219,72203,94550,
#Partially deleted in new
chr8	27325478	27459386	chr8:27325478-27459386	1	+	27397584	27458509	0	31	203,241,179,88,80,63,55,141,75,102,118,40,47,51,98,85,101,116,101,90,205,109,66,126,147,36,25,47,138,81,1093,	0,72069,94416,95178,96825,104614,104885,105397,105919,106781,107956,108614,109034,110264,110772,111643,111917,112286,113552,113830,114758,117396,118727,120315,125270,125564,126006,127635,128675,129052,132815,
#Partially deleted in new
chr8	27325563	27459391	chr8:27325563-27459391	1	+	27397584	27458509	0	30	118,241,179,88,80,63,55,141,75,102,118,40,47,51,98,85,101,116,101,90,205,109,66,147,36,25,47,138,81,1098,	0,71984,94331,95093,96740,104529,104800,105312,105834,106696,107871,108529,108949,110179,110687,111558,111832,112201,113467,113745,114673,117311,118642,125185,125479,125921,127550,128590,128967,132730,
#Partially deleted in new
chr8	27326822	27422385	chr8:27326822-27422385	0	+	27397584	27422385	789624	5	61,241,179,88,82,	0,70725,93072,93834,95481,
#Partially deleted in new
chr8	27380650	27430388	chr8:27380650-27430388	0	+	27397584	27430388	789624	7	142,241,179,88,80,63,25,	0,16897,39244,40006,41653,49442,49713,
#Partially deleted in new
chr8	27380653	27396295	chr8:27380653-27396295	0	+	27380653	27380653	8553170	2	139,240,	0,15402,
#Partially deleted in new
chr8	27397451	27459386	chr8:27397451-27459386	1	+	27397584	27458509	0	29	337,179,88,80,63,55,141,75,102,118,40,47,51,98,85,101,116,101,90,205,109,66,147,36,25,47,138,81,1093,	0,22443,23205,24852,32641,32912,33424,33946,34808,35983,36641,37061,38291,38799,39670,39944,40313,41579,41857,42785,45423,46754,53297,53591,54033,55662,56702,57079,60842,
#Partially deleted in new
chr8	27422275	27431206	chr8:27422275-27431206	0	+	27422275	27422275	8553170	4	108,63,55,331,	0,7817,8088,8600,
#Partially deleted in new
chr8	27430886	27436308	chr8:27430886-27436308	0	+	27430886	27436308	789624	8	130,75,102,79,40,47,51,58,	0,511,1373,2548,3206,3626,4856,5364,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr8	27430898	27452559	chr8:27430898-27452559	0	+	27430898	27430898	8553170	18	574,102,118,40,47,51,98,85,101,116,101,90,205,109,66,147,36,1075,	0,1361,2536,3194,3614,4844,5352,6223,6497,6866,8132,8410,9338,11976,13307,19850,20144,20586,
#Partially deleted in new
chr8	27432102	27434522	chr8:27432102-27434522	0	+	27432102	27432102	8553170	4	259,118,40,10,	0,1332,1990,2410,
#Deleted in new
chr8	27433369	27433434	chr8:27433369-27433434	3	+	27433369	27433369	5263520	1	65,	0,
#Deleted in new
chr8	27437454	27437992	chr8:27437454-27437992	0	+	27437454	27437454	8553170	2	42,228,	0,310,
#Partially deleted in new
chr8	27452856	27454587	chr8:27452856-27454587	0	+	27452856	27452856	8553170	3	304,138,57,	0,1297,1674,
#Partially deleted in new
chr8	27454030	27458474	chr8:27454030-27458474	0	+	27454030	27454030	8553170	2	581,181,	0,4263,
#Partially deleted in new
chr8	27459760	27479296	chr8:27459760-27479296	3	-	27461628	27471058	0	7	1994,1015,110,45,221,209,473,	0,3218,7468,9574,10000,11225,19063,
#Partially deleted in new
chr8	27460575	27467517	chr8:27460575-27467517	0	-	27460575	27460575	8553170	2	1179,289,	0,6653,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	27461097	27479013	chr8:27461097-27479013	1	-	27461628	27469988	789624	7	657,1015,110,45,271,209,190,	0,1881,6131,8237,8663,9888,17726,
#Partially deleted in new
chr8	27461097	27479214	chr8:27461097-27479214	0	-	27463844	27471058	789624	7	657,882,110,45,221,209,391,	0,1881,6131,8237,8663,9888,17726,
#Partially deleted in new
chr8	27461602	27478851	chr8:27461602-27478851	1	-	27461628	27471058	0	7	152,1015,110,45,176,209,28,	0,1376,5626,7732,8203,9383,17221,
#Partially deleted in new
chr8	27463390	27479261	chr8:27463390-27479261	0	-	27469652	27471058	789624	6	603,110,45,453,209,438,	0,3838,5944,6138,7595,15433,
#Partially deleted in new
chr8	27463627	27469408	chr8:27463627-27469408	0	-	27463627	27463627	8553170	3	361,110,74,	0,3601,5707,
#Partially deleted in new
chr8	27469348	27479883	chr8:27469348-27479883	0	-	27469348	27471058	789624	4	31,221,209,115,	0,412,1637,10420,
#Partially deleted in new
chr8	27469811	27478929	chr8:27469811-27478929	0	-	27469811	27471058	789624	4	170,209,61,106,	0,1174,7356,9012,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	27469904	27475502	chr8:27469904-27475502	0	-	27469904	27471058	789624	3	77,209,290,	0,1081,5308,
#Partially deleted in new
chr8	27471001	27479857	chr8:27471001-27479857	0	-	27471001	27471058	789624	4	193,60,236,89,	0,4211,7822,8767,
#Partially deleted in new
chr8	27471139	27479291	chr8:27471139-27479291	0	-	27471139	27471139	8553170	2	94,468,	0,7684,
#Partially deleted in new
chr8	27471188	27479042	chr8:27471188-27479042	0	-	27471188	27471188	8553170	3	6,71,23,	0,7635,7831,
#Partially deleted in new
chr8	27490778	27545564	chr8:27490778-27545564	3	+	27491208	27544522	0	19	531,85,160,191,123,75,96,79,35,27,86,112,72,34,103,70,81,59,1121,	0,10147,12825,14177,16093,21057,24939,25541,27259,30104,31644,34583,46005,47880,49775,50694,52970,53407,53665,
#Partially deleted in new
chr8	27490780	27505084	chr8:27490780-27505084	0	+	27491208	27505084	789624	5	58,142,85,160,129,	0,387,10145,12823,14175,
#Partially deleted in new
chr8	27491124	27544919	chr8:27491124-27544919	1	+	27491208	27544522	789624	15	185,85,96,79,35,27,86,112,72,34,103,70,81,59,476,	0,9801,24593,25195,26913,29758,31298,34237,45659,47534,49429,50348,52624,53061,53319,
#Partially deleted in new
chr8	27491124	27539255	chr8:27491124-27539255	0	+	27491124	27491124	8553170	14	185,85,160,191,123,75,96,79,35,27,86,112,72,597,	0,9801,12479,13831,15747,20711,24593,25195,26913,29758,31298,34237,45659,47534,
#Partially deleted in new
chr8	27491150	27544919	chr8:27491150-27544919	1	+	27503615	27544522	0	18	159,160,191,123,75,96,79,35,27,86,112,72,34,103,70,81,59,476,	0,12453,13805,15721,20685,24567,25169,26887,29732,31272,34211,45633,47508,49403,50322,52598,53035,53293,
#Partially deleted in new
chr8	27491165	27544913	chr8:27491165-27544913	1	+	27500983	27544522	0	19	144,47,160,191,123,75,96,79,35,27,86,112,72,34,103,70,81,59,470,	0,9798,12438,13790,15706,20670,24552,25154,26872,29717,31257,34196,45618,47493,49388,50307,52583,53020,53278,
#Partially deleted in new
chr8	27491191	27544892	chr8:27491191-27544892	1	+	27491208	27544522	789624	18	118,85,160,191,123,75,79,35,27,86,112,72,34,103,70,81,59,449,	0,9734,12412,13764,15680,20644,25128,26846,29691,31231,34170,45592,47467,49362,50281,52557,52994,53252,
#Partially deleted in new
chr8	27491194	27506904	chr8:27491194-27506904	0	+	27491194	27491194	8553170	5	115,83,160,191,33,	0,9733,12409,13761,15677,
#Partially deleted in new
chr8	27491209	27522509	chr8:27491209-27522509	0	+	27491209	27522509	789624	10	100,85,160,191,75,96,79,35,27,87,	0,9716,12394,13746,20626,24508,25110,26828,29673,31213,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	27492841	27503759	chr8:27492841-27503759	0	+	27492841	27492841	8553170	3	324,85,156,	0,8084,10762,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	27505046	27512100	chr8:27505046-27512100	0	+	27505046	27505046	8553170	3	100,123,265,	0,1825,6789,
#Partially deleted in new
chr8	27515462	27522487	chr8:27515462-27522487	0	+	27515462	27515462	8553170	5	351,79,35,27,65,	0,857,2575,5420,6960,
#Partially deleted in new
chr8	27560273	27589073	chr8:27560273-27589073	7	+	27560273	27560273	16724991	6	101,96,107,151,164,129,	0,5176,17337,25686,26671,28671,
#Partially deleted in new
chr8	27596916	27615031	chr8:27596916-27615031	3	-	27598240	27610571	789624	9	1334,176,230,105,412,171,149,126,377,	0,1543,2863,7374,8007,9437,12021,13558,17738,
#Partially deleted in new
chr8	27597807	27611431	chr8:27597807-27611431	1	-	27598240	27610571	789624	9	443,176,230,105,412,171,149,126,286,	0,652,1972,6483,7116,8546,11130,12667,13338,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	27597995	27614693	chr8:27597995-27614693	0	-	27597995	27597995	8553170	8	255,1550,105,412,171,149,126,39,	0,464,6295,6928,8358,10942,12479,16659,
#Partially deleted in new
chr8	27597995	27611357	chr8:27597995-27611357	1	-	27598240	27610571	789624	8	255,176,230,105,412,171,149,883,	0,464,1784,6295,6928,8358,10942,12479,
#Partially deleted in new
chr8	27598142	27600015	chr8:27598142-27600015	0	-	27598240	27600015	789624	3	108,176,236,	0,317,1637,
#Partially deleted in new
chr8	27598536	27605339	chr8:27598536-27605339	0	-	27598536	27605339	789624	4	99,230,105,416,	0,1243,5754,6387,
#Partially deleted in new
chr8	27604217	27605339	chr8:27604217-27605339	0	-	27604217	27604217	8553170	2	178,416,	0,706,
#Partially deleted in new
chr8	27604309	27614690	chr8:27604309-27614690	0	-	27604309	27610571	789624	7	86,146,164,171,149,126,36,	0,614,862,2044,4628,6165,10345,
#Partially deleted in new
chr8	27604365	27611751	chr8:27604365-27611751	0	-	27604365	27611604	789624	6	30,412,171,149,126,151,	0,558,1988,4572,6109,7235,
#Partially deleted in new
chr8	27605140	27611205	chr8:27605140-27611205	0	-	27605140	27610571	789624	5	195,171,149,126,96,	0,1213,3797,5334,5969,
#Partially deleted in new
chr8	27606353	27611966	chr8:27606353-27611966	0	-	27606353	27610571	789624	4	171,149,126,137,	0,2584,4121,5476,
#Partially deleted in new
chr8	27606363	27611218	chr8:27606363-27611218	0	-	27606363	27610571	789624	4	161,149,126,144,	0,2574,4111,4711,
#Partially deleted in new
chr8	27606381	27614692	chr8:27606381-27614692	0	-	27606381	27610571	789624	5	143,149,126,198,38,	0,2556,4093,7791,8273,
#Partially deleted in new
chr8	27608540	27614700	chr8:27608540-27614700	0	-	27608540	27608540	8553170	3	546,126,46,	0,1934,6114,
#Partially deleted in new
chr8	27608936	27614681	chr8:27608936-27614681	0	-	27608936	27610571	789624	3	150,126,27,	0,1538,5718,
#Partially deleted in new
chr8	27608936	27614698	chr8:27608936-27614698	0	-	27608936	27610571	789624	4	150,126,106,44,	0,1538,4641,5718,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	27610475	27614243	chr8:27610475-27614243	0	-	27610475	27610571	789624	2	125,666,	0,3102,
#Deleted in new
chr8	27610600	27610751	chr8:27610600-27610751	3	-	27610600	27610600	5263520	1	151,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	27633867	27676776	chr8:27633867-27676776	1	+	27634200	27676600	789624	6	340,99,120,99,1044,208,	0,15834,17640,22914,24628,42701,
#Partially deleted in new
chr8	27634180	27673020	chr8:27634180-27673020	3	+	27634200	27671351	789624	6	27,99,120,99,1044,2121,	0,15521,17327,22601,24315,36719,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	27679835	27679935	chr8:27679835-27679935	3	+	27679835	27679835	8553170	1	100,	0,
#Deleted in new
chr8	27697216	27697526	chr8:27697216-27697526	7	-	27697216	27697216	16724991	1	310,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	27701193	27703789	chr8:27701193-27703789	3	+	27701193	27701193	8553170	1	2596,	0,
#Deleted in new
chr8	27701672	27701767	chr8:27701672-27701767	3	-	27701672	27701672	5263520	1	95,	0,
#Deleted in new
chr8	27701676	27701759	chr8:27701676-27701759	3	+	27701676	27701676	5263520	1	83,	0,
#Partially deleted in new
chr8	27733310	27772634	chr8:27733310-27772634	3	-	27736215	27772540	789624	9	2935,46,203,104,76,52,40,48,122,	0,7161,14766,15184,19201,23408,29108,31893,39202,
#Partially deleted in new
chr8	27733317	27772653	chr8:27733317-27772653	0	-	27752574	27772540	789624	8	2928,46,203,104,76,40,48,141,	0,7154,14759,15177,19194,29101,31886,39195,
#Partially deleted in new
chr8	27735051	27772639	chr8:27735051-27772639	0	-	27752574	27772540	789624	7	1194,46,203,76,40,48,127,	0,5420,13025,17460,27367,30152,37461,
#Partially deleted in new
chr8	27735812	27772607	chr8:27735812-27772607	0	-	27748244	27772540	789624	7	433,203,76,52,40,48,95,	0,12264,16699,20906,26606,29391,36700,
#Partially deleted in new
chr8	27735861	27772640	chr8:27735861-27772640	0	-	27748244	27772540	789624	8	384,46,203,76,52,40,48,128,	0,4610,12215,16650,20857,26557,29342,36651,
#Partially deleted in new
chr8	27736051	27772634	chr8:27736051-27772634	1	-	27736215	27752551	789624	7	194,46,203,104,76,40,122,	0,4420,12025,12443,16460,26367,36461,
#Partially deleted in new
chr8	27736077	27748475	chr8:27736077-27748475	0	-	27736077	27736077	8553170	3	168,46,399,	0,4394,11999,
#Partially deleted in new
chr8	27736162	27772627	chr8:27736162-27772627	0	-	27740500	27772540	789624	7	83,46,76,52,40,48,115,	0,4309,16349,20556,26256,29041,36350,
#Partially deleted in new
chr8	27740500	27772540	chr8:27740500-27772540	1	-	27740500	27772540	789624	6	17,76,52,40,48,28,	0,12011,16218,21918,24703,32012,
#Deleted in new
chr8	27747752	27748548	chr8:27747752-27748548	0	-	27747752	27747752	8553170	2	527,54,	0,742,
#Partially deleted in new
chr8	27747876	27752589	chr8:27747876-27752589	0	-	27747876	27747876	8553170	2	403,78,	0,4635,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	27748071	27772613	chr8:27748071-27772613	0	-	27764528	27772540	789624	8	208,104,76,52,40,248,48,101,	0,423,4440,8647,14347,16214,17132,24441,
#Partially deleted in new
chr8	27771948	27776870	chr8:27771948-27776870	0	+	27775514	27776870	789624	3	120,69,509,	0,3550,4413,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	27773644	27773748	chr8:27773644-27773748	3	+	27773644	27773644	8553170	1	104,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr8	27774385	27805316	chr8:27774385-27805316	3	+	27775514	27803438	789624	11	222,69,808,94,58,118,132,90,144,176,2011,	0,1113,1976,5788,9614,13499,14461,17577,18282,25155,28920,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	27774553	27812640	chr8:27774553-27812640	0	+	27775514	27787896	789624	12	54,69,808,118,132,90,144,176,68,145,35,664,	0,945,1808,13331,14293,17409,18114,24987,28752,33640,36751,37423,
#Deleted in new
chr8	27774668	27776707	chr8:27774668-27776707	0	+	27775514	27776707	789624	3	159,69,346,	0,830,1693,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	27775496	27780095	chr8:27775496-27780095	0	+	27775496	27775496	8553170	2	71,3734,	0,865,
#Partially deleted in new
chr8	27776509	27780204	chr8:27776509-27780204	0	+	27776509	27776509	8553170	2	660,31,	0,3664,
#Partially deleted in new
chr8	27780198	27799601	chr8:27780198-27799601	0	+	27780198	27799601	789624	6	69,58,118,132,90,61,	0,3801,7686,8648,11764,19342,
#Partially deleted in new
chr8	27787927	27808228	chr8:27787927-27808228	1	+	27787927	27808228	789624	7	75,132,90,144,176,68,35,	0,919,4035,4740,11613,15378,20266,
#Partially deleted in new
chr8	27809619	27838095	chr8:27809619-27838095	3	-	27810304	27833113	0	8	882,177,130,170,143,94,78,444,	0,1338,10945,12699,13443,18485,23436,28032,
#Partially deleted in new
chr8	27810200	27838082	chr8:27810200-27838082	1	-	27810304	27833113	0	8	301,210,130,170,143,94,78,373,	0,757,10364,12118,12862,17904,22855,27509,
#Partially deleted in new
chr8	27810293	27837783	chr8:27810293-27837783	0	-	27820654	27833113	789624	6	208,177,130,94,78,132,	0,664,10271,17811,22762,27358,
#Partially deleted in new
chr8	27820603	27837809	chr8:27820603-27837809	0	-	27820603	27828154	789624	6	91,170,143,94,92,158,	0,1715,2459,7501,12438,17048,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	27838476	27840382	chr8:27838476-27840382	7	+	27838476	27838476	16724991	3	349,55,313,	0,998,1593,
#Partially deleted in new
chr8	27869881	27992727	chr8:27869881-27992727	3	-	27871933	27987615	789624	9	2189,198,57,99,81,675,129,127,471,	0,9687,34896,37266,39781,51689,96532,117622,122375,
#Partially deleted in new
chr8	27870235	27992664	chr8:27870235-27992664	1	-	27871933	27987615	789624	8	1835,198,57,99,81,129,127,408,	0,9333,34542,36912,39427,96178,117268,122021,
#Deleted in new
chr8	27886038	27886116	chr8:27886038-27886116	3	-	27886038	27886038	5263520	1	78,	0,
#Deleted in new
chr8	27903228	27903495	chr8:27903228-27903495	7	-	27903228	27903228	16724991	1	267,	0,
#Deleted in new
chr8	27903565	27903715	chr8:27903565-27903715	7	+	27903565	27903565	16724991	1	150,	0,
#Partially deleted in new
chr8	27904368	27992624	chr8:27904368-27992624	1	-	27904727	27987615	789624	7	466,99,81,675,129,127,368,	0,2779,5294,17202,62045,83135,87888,
#Partially deleted in new
chr8	27904727	27987615	chr8:27904727-27987615	1	-	27904727	27987615	789624	5	107,99,81,675,112,	0,2420,4935,16843,82776,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr8	28021963	28083871	chr8:28021963-28083871	3	-	28023316	28074410	789624	19	1499,91,137,109,139,158,165,134,106,90,19,176,210,231,223,109,105,89,97,	0,4998,7302,8346,9279,11576,19087,23563,25543,34001,36294,38462,42558,45550,46252,47580,48288,52404,61811,
#Partially deleted in new
chr8	28069642	28083850	chr8:28069642-28083850	0	-	28069642	28074410	789624	4	82,105,89,76,	0,609,4725,14132,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	28089672	28107964	chr8:28089672-28107964	0	+	28097241	28107964	789624	5	183,100,139,71,52,	0,7546,10155,17040,18240,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr8	28090230	28191156	chr8:28090230-28191156	3	+	28097241	28189725	789624	15	102,100,139,71,64,69,155,162,127,194,91,66,228,82,1508,	0,6988,9597,16482,17682,20139,22788,39271,42047,47467,65711,68337,69998,71766,99418,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	28090345	28113173	chr8:28090345-28113173	0	+	28097241	28113173	789624	7	58,100,139,71,64,69,155,	0,6873,9482,16367,17567,20024,22673,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr8	28092837	28191156	chr8:28092837-28191156	1	+	28093214	28189725	789624	15	396,100,139,71,64,69,155,162,127,194,91,66,228,82,1508,	0,4381,6990,13875,15075,17532,20181,36664,39440,44860,63104,65730,67391,69159,96811,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr8	28093066	28191150	chr8:28093066-28191150	1	+	28106730	28189725	789624	14	167,100,71,64,69,155,162,127,194,91,66,228,82,1502,	0,4152,13646,14846,17303,19952,36435,39211,44631,62875,65501,67162,68930,96582,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr8	28093066	28191150	chr8:28093066-28191150	1	+	28106747	28189725	789624	13	167,139,71,69,155,162,127,194,91,66,228,82,1502,	0,6761,13646,17303,19952,36435,39211,44631,62875,65501,67162,68930,96582,
#Partially deleted in new
chr8	28093101	28190094	chr8:28093101-28190094	0	+	28093214	28106731	789624	13	132,100,71,69,155,162,127,194,91,66,228,82,446,	0,4117,13611,17268,19917,36400,39176,44596,62840,65466,67127,68895,96547,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	28093111	28113822	chr8:28093111-28113822	0	+	28093111	28093111	8553170	8	122,100,139,71,64,69,155,159,	0,4107,6716,13601,14801,17258,19907,20552,
#Partially deleted in new
chr8	28093111	28189992	chr8:28093111-28189992	1	+	28099924	28189725	789624	14	122,139,71,64,69,155,162,127,194,91,66,228,82,344,	0,6716,13601,14801,17258,19907,36390,39166,44586,62830,65456,67117,68885,96537,
#Partially deleted in new
chr8	28093138	28190203	chr8:28093138-28190203	0	+	28093214	28106731	789624	14	95,100,71,64,69,155,162,127,194,91,66,228,82,555,	0,4080,13574,14774,17231,19880,36363,39139,44559,62803,65429,67090,68858,96510,
#Partially deleted in new
chr8	28093139	28190094	chr8:28093139-28190094	0	+	28099924	28110382	789624	13	94,139,71,69,155,162,127,194,91,66,228,82,446,	0,6688,13573,17230,19879,36362,39138,44558,62802,65428,67089,68857,96509,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	28093147	28110913	chr8:28093147-28110913	0	+	28093147	28093147	8553170	6	86,100,139,71,64,544,	0,4071,6680,13565,14765,17222,
#Partially deleted in new
chr8	28093221	28110422	chr8:28093221-28110422	0	+	28097241	28110422	789624	6	139,100,139,71,64,53,	0,3997,6606,13491,14691,17148,
#Partially deleted in new
chr8	28093446	28107944	chr8:28093446-28107944	0	+	28097241	28107944	789624	5	203,100,139,71,32,	0,3772,6381,13266,14466,
#Partially deleted in new
chr8	28099837	28112701	chr8:28099837-28112701	0	+	28099837	28099837	8553170	5	129,71,64,69,230,	0,6875,8075,10532,12634,
#Partially deleted in new
chr8	28118897	28158625	chr8:28118897-28158625	0	+	28118897	28118897	8553170	6	147,162,127,194,91,58,	0,10604,13380,18800,37044,39670,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	28129318	28132404	chr8:28129318-28132404	0	+	28129318	28129318	8553170	2	345,127,	0,2959,
#Partially deleted in new
chr8	28158579	28190087	chr8:28158579-28190087	0	+	28158579	28183252	789624	5	54,228,82,71,439,	0,1649,3417,24614,31069,
#Partially deleted in new
chr8	28158597	28190089	chr8:28158597-28190089	0	+	28158597	28162040	789624	4	36,145,58,441,	0,1631,3423,31051,
#Partially deleted in new
chr8	28225928	28227562	chr8:28225928-28227562	7	+	28225928	28225928	16724991	2	700,236,	0,1398,
#Deleted in new
chr8	28238429	28238905	chr8:28238429-28238905	7	+	28238429	28238429	16724991	1	476,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	28250062	28339255	chr8:28250062-28339255	3	-	28250062	28250062	8553170	2	657,230,	0,88963,
#Deleted in new
chr8	28299682	28300566	chr8:28299682-28300566	7	+	28299682	28299682	16724991	1	884,	0,
#Partially deleted in new
chr8	28316985	28339376	chr8:28316985-28339376	0	+	28329157	28339376	789624	3	68,149,337,	0,12149,22054,
#Partially deleted in new
chr8	28317131	28343355	chr8:28317131-28343355	3	+	28329157	28339444	789624	4	185,149,452,414,	0,12003,21908,25810,
#Deleted in new
chr8	28338647	28340208	chr8:28338647-28340208	0	+	28338647	28338647	8553170	2	141,1169,	0,392,
#Partially deleted in new
chr8	28338647	28343355	chr8:28338647-28343355	1	+	28339105	28339444	789624	3	141,452,414,	0,392,4294,
#Partially deleted in new
chr8	28345584	28386466	chr8:28345584-28386466	3	-	28348718	28361124	789624	10	3246,104,93,313,101,236,110,233,298,74,	0,3540,4479,5910,6988,7588,11085,14007,15300,40808,
#Deleted in new
chr8	28348277	28351566	chr8:28348277-28351566	0	-	28348809	28351566	789624	2	553,72,	0,3217,
#Partially deleted in new
chr8	28348286	28490256	chr8:28348286-28490256	0	-	28360975	28483446	789624	16	544,104,93,313,101,236,110,233,298,103,233,165,207,36,136,71,	0,838,1777,3208,4286,4886,8383,11305,12598,98884,103957,108479,115325,125485,135061,141899,
#Partially deleted in new
chr8	28348528	28385397	chr8:28348528-28385397	1	-	28348718	28361124	789624	10	302,104,93,313,101,236,110,233,258,318,	0,596,1535,2966,4044,4644,8141,11063,12356,36551,
#Partially deleted in new
chr8	28348558	28386073	chr8:28348558-28386073	1	-	28348718	28361124	789624	10	272,104,93,313,101,236,110,233,258,70,	0,566,1505,2936,4014,4614,8111,11033,12326,37445,
#Deleted in new
chr8	28351417	28353254	chr8:28351417-28353254	0	-	28351417	28351417	8553170	3	390,101,82,	0,1155,1755,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	28356689	28375379	chr8:28356689-28375379	0	-	28356689	28361124	789624	4	90,233,258,118,	0,2902,4195,18572,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	28359594	28386446	chr8:28359594-28386446	0	-	28359594	28361124	789624	4	230,298,121,54,	0,1290,15667,26798,
#Partially deleted in new
chr8	28359691	28386428	chr8:28359691-28386428	0	-	28359691	28361124	789624	4	133,298,117,36,	0,1193,8757,26701,
#Partially deleted in new
chr8	28359756	28386138	chr8:28359756-28386138	0	-	28359756	28361124	789624	3	68,298,135,	0,1128,26247,
#Partially deleted in new
chr8	28360982	28402701	chr8:28360982-28402701	0	-	28360982	28361124	789624	2	160,64,	0,41655,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	28365347	28375378	chr8:28365347-28375378	0	-	28365347	28365347	8553170	3	179,117,117,	0,3101,9914,
#Partially deleted in new
chr8	28415523	28420055	chr8:28415523-28420055	3	-	28415523	28415523	8553170	2	346,165,	0,4367,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	28416447	28416551	chr8:28416447-28416551	3	+	28416447	28416447	8553170	1	104,	0,
#Partially deleted in new
chr8	28428407	28456806	chr8:28428407-28456806	0	-	28428726	28456806	789624	3	329,233,41,	0,23836,28358,
#Partially deleted in new
chr8	28428411	28490318	chr8:28428411-28490318	3	-	28428726	28483446	789624	9	325,26,103,233,165,207,36,115,133,	0,966,18759,23832,28354,35200,45360,54936,61774,
#Partially deleted in new
chr8	28428423	28429412	chr8:28428423-28429412	0	-	28428423	28428423	8553170	2	313,35,	0,954,
#Partially deleted in new
chr8	28428447	28490278	chr8:28428447-28490278	1	-	28428592	28483446	789624	7	289,103,233,165,207,115,93,	0,18723,23796,28318,35164,54900,61738,
#Partially deleted in new
chr8	28428642	28490237	chr8:28428642-28490237	1	-	28428726	28483446	789624	8	94,26,103,233,165,207,115,52,	0,735,18528,23601,28123,34969,54705,61543,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	28446962	28463665	chr8:28446962-28463665	0	-	28446962	28446962	8553170	3	311,233,54,	0,5281,16649,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	28447263	28455687	chr8:28447263-28455687	3	+	28447263	28447263	8553170	3	301,78,64,	0,1690,8360,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	28448953	28455902	chr8:28448953-28455902	1	+	28448953	28448953	8553170	2	153,279,	0,6670,
#Partially deleted in new
chr8	28452261	28490226	chr8:28452261-28490226	0	-	28452261	28452261	8553170	5	105,165,207,36,41,	0,4504,11350,21510,37924,
#Partially deleted in new
chr8	28452266	28490224	chr8:28452266-28490224	0	-	28452266	28483446	789624	5	210,207,36,115,39,	0,11345,21505,31081,37919,
#Partially deleted in new
chr8	28456657	28473786	chr8:28456657-28473786	0	-	28456657	28456657	8553170	3	273,207,15,	0,6954,17114,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	28465198	28483462	chr8:28465198-28483462	1	-	28465370	28483446	789624	3	247,36,115,	0,8573,18149,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	28494204	28574267	chr8:28494204-28574267	3	+	28503013	28563011	789624	7	139,533,197,1018,149,234,11470,	0,8465,26433,32942,57398,61533,68593,
#Partially deleted in new
chr8	28494213	28503119	chr8:28494213-28503119	0	+	28503013	28503119	789624	2	130,450,	0,8456,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	28494255	28574268	chr8:28494255-28574268	1	+	28503013	28563011	789624	8	88,46,533,197,1018,149,234,11471,	0,5677,8414,26382,32891,57347,61482,68542,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	28505115	28505182	chr8:28505115-28505182	3	-	28505115	28505115	5263520	1	67,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	28530410	28530519	chr8:28530410-28530519	7	+	28530410	28530410	16724991	1	109,	0,
#Deleted in new
chr8	28563062	28563981	chr8:28563062-28563981	0	+	28563062	28563062	8553170	2	204,41,	0,878,
#Partially deleted in new
chr8	28600468	28715616	chr8:28600468-28715616	0	+	28600468	28600468	8553170	5	246,68,108,94,32,	0,7222,77617,112988,115116,
#Partially deleted in new
chr8	28622728	28750903	chr8:28622728-28750903	1	+	28713508	28750866	789624	7	82,79,969,128,145,129,247,	0,90728,94510,108494,114790,120357,127928,
#Partially deleted in new
chr8	28622760	28715786	chr8:28622760-28715786	0	+	28622760	28622760	8553170	4	50,128,94,202,	0,14541,90696,92824,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	28631405	28713513	chr8:28631405-28713513	0	+	28631405	28631405	8553170	4	269,93,123,57,	0,5931,54480,82051,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	28631431	28715610	chr8:28631431-28715610	0	+	28631431	28631431	8553170	4	119,300,94,26,	0,68098,82025,84153,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	28696197	28701319	chr8:28696197-28701319	3	-	28696197	28696197	8553170	2	2277,1414,	0,3708,
#Partially deleted in new
chr8	28698211	28700530	chr8:28698211-28700530	1	-	28698211	28698211	8553170	3	263,139,141,	0,1693,2178,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	28698402	28701464	chr8:28698402-28701464	1	-	28698402	28698402	789624	3	72,603,105,	0,1038,2957,
#Deleted in new
chr8	28700124	28701253	chr8:28700124-28701253	0	-	28700124	28700124	8553170	2	528,365,	0,764,
#Partially deleted in new
chr8	28701326	28753687	chr8:28701326-28753687	3	+	28716059	28750866	789624	7	333,94,2623,128,145,129,3031,	0,12130,14258,29896,36192,41759,49330,
#Partially deleted in new
chr8	28701604	28752832	chr8:28701604-28752832	0	+	28701604	28701604	8553170	4	55,94,482,172,	0,11852,13980,51056,
#Partially deleted in new
chr8	28710354	28715903	chr8:28710354-28715903	0	+	28710354	28710354	8553170	3	149,94,319,	0,3102,5230,
#Partially deleted in new
chr8	28710357	28743183	chr8:28710357-28743183	0	+	28710461	28743183	789624	4	146,128,145,98,	0,20865,27161,32728,
#Partially deleted in new
chr8	28716684	28743164	chr8:28716684-28743164	0	+	28716684	28731236	789624	4	213,128,145,79,	0,14538,20834,26401,
#Partially deleted in new
chr8	28718059	28750836	chr8:28718059-28750836	0	+	28718059	28750836	789624	4	148,128,145,180,	0,13163,19459,32597,
#Partially deleted in new
chr8	28730159	28750724	chr8:28730159-28750724	0	+	28731336	28750724	789624	5	59,128,145,129,68,	0,1063,7359,12926,20497,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	28739900	28755599	chr8:28739900-28755599	0	+	28739900	28739900	8553170	2	3314,4943,	0,10756,
#Partially deleted in new
chr8	28743975	28751094	chr8:28743975-28751094	0	+	28743975	28743975	8553170	2	108,438,	0,6681,
#Partially deleted in new
chr8	28767660	28890242	chr8:28767660-28890242	1	-	28768145	28889882	0	16	662,138,99,168,125,172,61,181,112,135,121,87,140,61,128,369,	0,2228,3321,8098,10168,13162,20168,26146,28883,44666,45831,67631,69976,82552,91775,122213,
#Partially deleted in new
chr8	28767660	28889964	chr8:28767660-28889964	3	-	28768145	28889882	0	17	662,138,99,168,125,172,61,181,112,135,121,87,140,63,61,128,91,	0,2228,3321,8098,10168,13162,20168,26146,28883,44666,45831,67631,69976,79086,82552,91775,122213,
#Partially deleted in new
chr8	28767660	28889913	chr8:28767660-28889913	0	-	28771150	28889882	789624	17	662,138,184,168,125,172,61,181,112,135,121,87,140,63,61,128,40,	0,2228,3321,8098,10168,13162,20168,26146,28883,44666,45831,67631,69976,79086,82552,91775,122213,
#Partially deleted in new
chr8	28767757	28889915	chr8:28767757-28889915	1	-	28768145	28859500	0	17	565,138,99,168,125,172,61,181,112,135,121,87,140,63,61,128,74,	0,2131,3224,8001,10071,13065,20071,26049,28786,44569,45734,67534,69879,78989,82455,91678,122084,
#Deleted in new
chr8	28767911	28771064	chr8:28767911-28771064	0	-	28768145	28771064	789624	3	465,138,83,	0,1977,3070,
#Partially deleted in new
chr8	28767946	28889942	chr8:28767946-28889942	0	-	28837729	28889882	789624	15	376,138,99,168,125,172,61,181,112,135,121,87,140,61,69,	0,1942,3035,7812,9882,12876,19882,25860,28597,44380,45545,67345,69690,82266,121927,
#Partially deleted in new
chr8	28769600	28775925	chr8:28769600-28775925	0	-	28769600	28769600	8553170	3	426,99,167,	0,1381,6158,
#Partially deleted in new
chr8	28769888	28776203	chr8:28769888-28776203	0	-	28769888	28769888	8553170	4	138,99,168,173,	0,1093,5870,6142,
#Partially deleted in new
chr8	28771005	28776271	chr8:28771005-28776271	0	-	28771005	28771005	8553170	2	75,513,	0,4753,
#Partially deleted in new
chr8	28777859	28784000	chr8:28777859-28784000	0	-	28777859	28777859	8553170	3	94,172,416,	0,2963,5725,
#Partially deleted in new
chr8	28780950	28796975	chr8:28780950-28796975	0	-	28780950	28780950	8553170	4	44,61,181,432,	0,6878,12856,15593,
#Partially deleted in new
chr8	28793728	28889921	chr8:28793728-28889921	0	-	28793728	28793728	8553170	10	259,112,135,121,87,140,63,61,128,48,	0,2815,18598,19763,41563,43908,53018,56484,65707,96145,
#Partially deleted in new
chr8	28793806	28889909	chr8:28793806-28889909	0	-	28793806	28889882	789624	9	181,112,121,87,140,63,61,128,36,	0,2737,19685,41485,43830,52940,56406,65629,96067,
#Partially deleted in new
chr8	28796567	28889927	chr8:28796567-28889927	0	-	28812436	28889882	789624	8	88,135,87,140,63,61,128,54,	0,15759,38724,41069,50179,53645,62868,93306,
#Partially deleted in new
chr8	28796618	28859546	chr8:28796618-28859546	0	-	28796618	28859546	789624	7	37,135,121,140,63,61,111,	0,15708,16873,41018,50128,53594,62817,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	28798141	28799469	chr8:28798141-28799469	0	+	28798141	28798141	8553170	2	500,48,	0,1280,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	28799263	28802085	chr8:28799263-28802085	3	+	28799263	28799263	8553170	2	1993,132,	0,2690,
#Deleted in new
chr8	28810102	28810418	chr8:28810102-28810418	7	+	28810102	28810102	16724991	1	316,	0,
#Partially deleted in new
chr8	28812356	28813700	chr8:28812356-28813700	0	-	28812356	28812356	8553170	2	105,209,	0,1135,
#Partially deleted in new
chr8	28813491	28859503	chr8:28813491-28859503	0	-	28837766	28859503	789624	4	121,87,140,68,	0,21800,24145,45944,
#Partially deleted in new
chr8	28837703	28889934	chr8:28837703-28889934	0	-	28837703	28859500	789624	6	73,63,61,128,173,61,	0,9043,12509,21732,24336,52170,
#Partially deleted in new
chr8	28850008	28889978	chr8:28850008-28889978	0	-	28850008	28850008	8553170	3	265,128,105,	0,9427,39865,
#Partially deleted in new
chr8	28890393	29052734	chr8:28890393-29052734	1	+	28963867	29051155	0	10	285,80,477,86,111,154,83,96,95,1717,	0,73417,79649,89677,118678,128366,154967,156964,158560,160624,
#Partially deleted in new
chr8	28890394	29049591	chr8:28890394-29049591	1	+	28963867	29049385	0	10	284,80,477,86,111,154,83,96,92,302,	0,73416,79648,89676,118677,128365,154966,156963,158562,158895,
#Partially deleted in new
chr8	28890403	29053270	chr8:28890403-29053270	3	+	28963867	29051155	0	11	616,31,80,477,86,111,154,83,96,95,2253,	0,1356,73407,79639,89667,118668,128356,154957,156954,158550,160614,
#Partially deleted in new
chr8	28890403	29049321	chr8:28890403-29049321	1	+	28963867	29049114	789624	9	275,80,477,86,111,154,83,96,368,	0,73407,79639,89667,118668,128356,154957,156954,158550,
#Partially deleted in new
chr8	28890403	29049354	chr8:28890403-29049354	0	+	28963867	29049354	789624	9	275,80,477,86,111,154,83,95,65,	0,73407,79639,89667,118668,128356,154957,158550,158886,
#Partially deleted in new
chr8	28890409	28970672	chr8:28890409-28970672	0	+	28890409	28890409	8553170	3	269,80,630,	0,73401,79633,
#Partially deleted in new
chr8	28890624	29051870	chr8:28890624-29051870	1	+	28963867	29051591	789624	10	54,80,477,86,111,154,83,96,92,318,	0,73186,79418,89446,118447,128135,154736,156733,158332,160928,
#Partially deleted in new
chr8	28890624	29051917	chr8:28890624-29051917	0	+	28963867	29042702	0	11	54,80,477,86,111,154,80,83,96,95,900,	0,73186,79418,89446,118447,128135,152014,154736,156733,158329,160393,
#Partially deleted in new
chr8	28890923	28970435	chr8:28890923-28970435	0	+	28890923	28890923	8553170	3	96,80,393,	0,72887,79119,
#Partially deleted in new
chr8	28891315	29051898	chr8:28891315-29051898	1	+	28963867	29051591	789624	10	169,80,477,86,111,154,83,96,92,346,	0,72495,78727,88755,117756,127444,154045,156042,157641,160237,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	28915578	28915864	chr8:28915578-28915864	3	-	28915578	28915578	8553170	1	286,	0,
#Partially deleted in new
chr8	28963862	29051549	chr8:28963862-29051549	1	+	28963867	29051155	0	10	28,477,86,111,154,83,96,92,72,532,	0,6180,16208,45209,54897,81498,83495,85094,85427,87155,
#Partially deleted in new
chr8	28970435	29018899	chr8:28970435-29018899	0	+	28970435	28970435	8553170	5	84,86,111,138,140,	0,9635,38636,39248,48324,
#Partially deleted in new
chr8	29046299	29050654	chr8:29046299-29050654	0	+	29046299	29046299	8553170	4	117,96,95,453,	0,1058,2654,3902,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	29048493	29048604	chr8:29048493-29048604	7	-	29048493	29048493	16724991	1	111,	0,
#Deleted in new
chr8	29051017	29064764	chr8:29051017-29064764	0	+	29051017	29051155	789624	3	146,82,589,	0,12864,13158,
#Deleted in new
chr8	29052516	29053759	chr8:29052516-29053759	0	+	29052516	29052516	8553170	2	205,102,	0,1141,
#Deleted in new
chr8	29055934	29056685	chr8:29055934-29056685	3	+	29055934	29055934	8553170	2	38,514,	0,237,
#Partially deleted in new
chr8	29067278	29263073	chr8:29067278-29263073	3	-	29070503	29263034	0	40	3488,697,63,134,109,54,78,153,93,177,125,56,127,100,30,147,133,158,171,129,150,147,163,211,191,87,131,135,111,213,112,113,135,88,181,93,61,13,94,94,	0,4341,8002,25466,31854,40860,42155,42639,46184,49552,51589,55312,56087,56745,59203,59843,63254,65029,66761,72784,73189,74878,79099,80113,81298,83018,88447,93454,98383,100094,108789,110187,112825,114640,119013,121236,123718,128908,178067,195701,
#Deleted in new
chr8	29067278	29068454	chr8:29067278-29068454	3	+	29067278	29067278	8553170	2	298,287,	0,889,
#Partially deleted in new
chr8	29070493	29108192	chr8:29070493-29108192	0	-	29070503	29108192	789624	5	273,697,134,109,54,	0,1126,22251,28639,37645,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	29110572	29140681	chr8:29110572-29140681	1	+	29110572	29110572	8553170	3	98,118,241,	0,27952,29868,
#Deleted in new
chr8	29140043	29140729	chr8:29140043-29140729	3	+	29140043	29140043	8553170	2	189,289,	0,397,
#Partially deleted in new
chr8	29145857	29263124	chr8:29145857-29263124	0	-	29186435	29263034	789624	15	683,211,191,87,131,135,111,213,112,113,135,88,181,94,145,	0,1534,2719,4439,9868,14875,19804,21515,30210,31608,34246,36061,40434,99488,117122,
#Partially deleted in new
chr8	29145862	29263097	chr8:29145862-29263097	1	-	29146332	29263034	789624	18	678,211,191,87,131,135,111,213,112,113,135,88,181,93,61,13,94,118,	0,1529,2714,4434,9863,14870,19799,21510,30205,31603,34241,36056,40429,42652,45134,50324,99483,117117,
#Partially deleted in new
chr8	29150296	29263062	chr8:29150296-29263062	0	-	29245432	29263034	789624	16	87,131,135,111,213,112,113,135,88,181,93,61,13,94,100,83,	0,5429,10436,15365,17076,25771,27169,29807,31622,35995,38218,40700,45890,95049,99688,112683,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	29189300	29263093	chr8:29189300-29263093	0	-	29189300	29189300	8553170	3	1757,94,114,	0,56045,73679,
#Deleted in new
chr8	29218904	29219472	chr8:29218904-29219472	7	+	29218904	29218904	16724991	1	568,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	29333063	29350668	chr8:29333063-29350668	3	-	29337025	29350278	0	4	4348,220,146,823,	0,5218,7034,16782,
#Partially deleted in new
chr8	29336538	29348805	chr8:29336538-29348805	1	-	29337025	29345529	0	5	873,220,146,705,1015,	0,1743,3559,8831,11252,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	29351291	29360222	chr8:29351291-29360222	3	+	29351291	29351291	8553170	3	243,917,2103,	0,5129,6828,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	29352419	29353170	chr8:29352419-29353170	3	-	29352419	29352419	8553170	1	751,	0,
#Partially deleted in new
chr8	29527311	29530323	chr8:29527311-29530323	3	+	29527311	29527311	8553170	2	109,533,	0,2479,
#Partially deleted in new
chr8	29548170	29564341	chr8:29548170-29564341	3	+	29548170	29548170	8553170	2	243,321,	0,15850,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	29587000	29588426	chr8:29587000-29588426	3	+	29587000	29587000	8553170	1	1426,	0,
#Deleted in new
chr8	29632090	29632644	chr8:29632090-29632644	7	+	29632090	29632090	16724991	1	554,	0,
#Partially deleted in new
chr8	29673921	29735223	chr8:29673921-29735223	3	-	29673921	29673921	8553170	4	522,95,268,53,	0,3988,52234,61249,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	29721253	29748109	chr8:29721253-29748109	1	-	29721253	29721253	789624	4	898,143,268,95,	0,3623,4902,26761,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	29748308	29752297	chr8:29748308-29752297	1	+	29748308	29748308	789624	3	271,41,2668,	0,744,1321,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	29748324	29798490	chr8:29748324-29798490	0	+	29748324	29748324	789624	4	255,116,288,1656,	0,42007,42770,48510,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	29748349	29798492	chr8:29748349-29798492	3	+	29748349	29748349	789624	4	230,116,787,1658,	0,41982,42745,48485,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	29815003	29828504	chr8:29815003-29828504	3	-	29815003	29815003	789624	3	1289,485,93,	0,6426,13408,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	29815003	29854543	chr8:29815003-29854543	0	-	29815003	29815003	8553170	3	1289,138,69,	0,30310,39471,
#Partially deleted in new
chr8	29864643	29871661	chr8:29864643-29871661	3	+	29864643	29864643	8553170	2	55,509,	0,6509,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	29905734	29908956	chr8:29905734-29908956	3	+	29905734	29905734	8553170	2	127,423,	0,2799,
#Deleted in new
chr8	29957271	29957348	chr8:29957271-29957348	3	-	29957271	29957271	5263520	1	77,	0,
#Deleted in new
chr8	30027712	30028900	chr8:30027712-30028900	7	+	30027712	30027712	16724991	1	1188,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	30043800	30043908	chr8:30043800-30043908	3	-	30043800	30043800	8553170	1	108,	0,
#Partially deleted in new
chr8	30063011	30083207	chr8:30063011-30083207	3	-	30063887	30082949	789624	6	902,152,142,418,179,361,	0,2976,3765,6630,10865,19835,
#Partially deleted in new
chr8	30063011	30083208	chr8:30063011-30083208	1	-	30063887	30069825	789624	5	902,152,142,418,362,	0,2976,3765,6630,19835,
#Partially deleted in new
chr8	30063097	30083124	chr8:30063097-30083124	0	-	30074031	30082949	789624	6	816,152,142,418,175,278,	0,2890,3679,6544,10779,19749,
#Partially deleted in new
chr8	30063125	30082948	chr8:30063125-30082948	0	-	30063823	30082948	789624	6	788,112,142,418,179,102,	0,2902,3651,6516,10751,19721,
#Partially deleted in new
chr8	30063129	30083153	chr8:30063129-30083153	0	-	30070048	30082949	789624	5	784,152,142,418,307,	0,2858,3647,6512,19717,
#Partially deleted in new
chr8	30063794	30070035	chr8:30063794-30070035	0	-	30063887	30070035	789624	4	119,80,142,394,	0,2193,2982,5847,
#Partially deleted in new
chr8	30063852	30082965	chr8:30063852-30082965	0	-	30070048	30082949	789624	3	45,418,119,	0,5789,18994,
#Partially deleted in new
chr8	30065711	30069949	chr8:30065711-30069949	0	-	30065934	30069949	789624	3	428,142,308,	0,1065,3930,
#Deleted in new
chr8	30065873	30067053	chr8:30065873-30067053	0	-	30065873	30065873	8553170	2	266,277,	0,903,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	30066903	30082424	chr8:30066903-30082424	0	-	30066903	30074050	789624	4	15,418,179,196,	0,2738,6973,15325,
#Partially deleted in new
chr8	30069792	30083064	chr8:30069792-30083064	0	-	30073965	30082949	789624	3	267,112,203,	0,4084,13069,
#Partially deleted in new
chr8	30069873	30083074	chr8:30069873-30083074	0	-	30069873	30082949	789624	3	186,152,228,	0,4003,12973,
#Partially deleted in new
chr8	30073693	30082971	chr8:30073693-30082971	0	-	30073693	30073693	8553170	2	362,125,	0,9153,
#Partially deleted in new
chr8	30073878	30083043	chr8:30073878-30083043	0	-	30073878	30073878	8553170	3	177,45,197,	0,4333,8968,
#Partially deleted in new
chr8	30082757	30083467	chr8:30082757-30083467	3	+	30082757	30082757	8553170	1	710,	0,
#Partially deleted in new
chr8	30095397	30108524	chr8:30095397-30108524	3	+	30095512	30105862	789624	4	131,76,187,2779,	0,6500,8902,10348,
#Partially deleted in new
chr8	30095409	30106028	chr8:30095409-30106028	1	+	30104390	30105862	789624	3	119,187,283,	0,8890,10336,
#Partially deleted in new
chr8	30095419	30132183	chr8:30095419-30132183	0	+	30095512	30132183	789624	4	109,76,187,208,	0,6478,8880,36556,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	30095424	30137697	chr8:30095424-30137697	1	+	30095512	30137312	789624	5	104,76,187,115,426,	0,6473,8875,36950,41847,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	30095479	30138348	chr8:30095479-30138348	1	+	30095512	30137502	789624	4	49,76,187,1077,	0,6418,8820,41792,
#Partially deleted in new
chr8	30095486	30177208	chr8:30095486-30177208	0	+	30095512	30164152	789624	6	42,76,187,65,106,83,	0,6411,8813,68624,79598,81639,
#Partially deleted in new
chr8	30095648	30106089	chr8:30095648-30106089	1	+	30095803	30105862	789624	4	240,76,187,344,	0,6249,8651,10097,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	30101939	30105087	chr8:30101939-30105087	0	+	30101939	30104922	789624	3	34,187,354,	0,2360,2794,
#Deleted in new
chr8	30117383	30117779	chr8:30117383-30117779	7	-	30117383	30117383	16724991	1	396,	0,
#Partially deleted in new
chr8	30131823	30144686	chr8:30131823-30144686	3	-	30131942	30144601	789624	3	1083,225,204,	0,6708,12659,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	30155829	30156232	chr8:30155829-30156232	3	-	30155829	30155829	8553170	1	403,	0,
#Partially deleted in new
chr8	30156296	30183640	chr8:30156296-30183640	3	+	30156383	30183173	0	7	110,65,106,89,48,143,566,	0,7814,18788,20829,23111,24191,26778,
#Partially deleted in new
chr8	30156318	30183461	chr8:30156318-30183461	0	+	30156383	30177178	789624	6	88,65,89,48,143,387,	0,7792,20807,23089,24169,26756,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	30156368	30181021	chr8:30156368-30181021	1	+	30156383	30180669	789624	6	38,65,106,89,48,534,	0,7742,18716,20757,23039,24119,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	30156368	30177494	chr8:30156368-30177494	0	+	30156368	30156368	8553170	4	38,65,106,369,	0,7742,18716,20757,
#Partially deleted in new
chr8	30156369	30183553	chr8:30156369-30183553	0	+	30156383	30179435	789624	6	37,65,106,48,143,479,	0,7741,18715,23038,24118,26705,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	30156374	30180501	chr8:30156374-30180501	0	+	30156383	30165741	789624	7	32,65,186,106,89,48,14,	0,7736,9341,18710,20751,23033,24113,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	30176553	30180888	chr8:30176553-30180888	3	-	30176553	30176553	8553170	2	335,248,	0,4087,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	30192428	30201332	chr8:30192428-30201332	3	+	30192428	30192428	8553170	3	3481,607,499,	0,7110,8405,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	30197403	30198048	chr8:30197403-30198048	3	+	30197403	30197403	8553170	1	645,	0,
#Partially deleted in new
chr8	30237381	30240997	chr8:30237381-30240997	7	+	30237381	30237381	16724991	4	677,87,617,517,	0,996,1391,3099,
#Deleted in new
chr8	30249501	30250092	chr8:30249501-30250092	7	-	30249501	30249501	16724991	1	591,	0,
#Deleted in new
chr8	30331960	30332277	chr8:30331960-30332277	7	-	30331960	30331960	16724991	1	317,	0,
#Partially deleted in new
chr8	30349865	30350347	chr8:30349865-30350347	7	-	30349865	30349865	16724991	1	482,	0,
#Partially deleted in new
chr8	30351872	30353518	chr8:30351872-30353518	7	+	30351872	30351872	16724991	1	1646,	0,
#Partially deleted in new
chr8	30352007	30353342	chr8:30352007-30353342	5	+	30352007	30352007	16724991	1	1335,	0,
#Partially deleted in new
chr8	30382118	30385401	chr8:30382118-30385401	0	-	30382118	30382118	789624	3	497,154,258,	0,1425,3025,
#Partially deleted in new
chr8	30382123	30385293	chr8:30382123-30385293	3	-	30382123	30382123	8553170	4	492,235,154,150,	0,1004,1420,3020,
#Partially deleted in new
chr8	30382123	30384740	chr8:30382123-30384740	0	-	30382123	30382123	8553170	3	492,235,27,	0,1004,2590,
#Partially deleted in new
chr8	30384478	30572261	chr8:30384478-30572261	3	+	30385092	30558949	0	9	680,78,39,63,151,131,70,104,1625,	0,90300,93320,94836,119807,160015,174408,181778,186158,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	30384510	30572256	chr8:30384510-30572256	1	+	30385092	30558949	0	10	648,78,39,63,151,131,70,206,104,1620,	0,90268,93288,94804,119775,159983,174376,177433,181746,186126,
#Partially deleted in new
chr8	30384510	30547522	chr8:30384510-30547522	1	+	30385092	30547423	0	7	648,78,39,63,151,131,231,	0,90268,93288,94804,119775,159983,162781,
#Partially deleted in new
chr8	30384526	30572256	chr8:30384526-30572256	1	+	30385092	30558887	0	10	632,78,39,63,151,131,86,70,104,1620,	0,90252,93272,94788,119759,159967,164973,174360,181730,186110,
#Partially deleted in new
chr8	30385084	30545164	chr8:30385084-30545164	1	+	30385092	30544771	789624	6	74,78,39,63,151,671,	0,89694,92714,94230,119201,159409,
#Partially deleted in new
chr8	30385202	30547483	chr8:30385202-30547483	1	+	30504351	30547423	789624	7	188,78,39,63,151,131,192,	0,89576,92596,94112,119083,159291,162089,
#Partially deleted in new
chr8	30387063	30544556	chr8:30387063-30544556	0	+	30504351	30544556	789624	6	55,78,39,63,151,63,	0,87715,90735,92251,117222,157430,
#Partially deleted in new
chr8	30387207	30547492	chr8:30387207-30547492	1	+	30504351	30547423	789624	7	117,78,39,63,151,131,201,	0,87571,90591,92107,117078,157286,160084,
#Partially deleted in new
chr8	30397926	30474816	chr8:30397926-30474816	0	+	30397926	30397926	8553170	2	60,38,	0,76852,
#Partially deleted in new
chr8	30442616	30545591	chr8:30442616-30545591	1	+	30504351	30544771	789624	6	184,78,39,63,151,1098,	0,32162,35182,36698,61669,101877,
#Partially deleted in new
chr8	30442719	30544622	chr8:30442719-30544622	0	+	30442719	30442719	8553170	9	81,205,116,24,78,39,63,151,129,	0,1956,2514,4223,32059,35079,36595,61566,101774,
#Partially deleted in new
chr8	30453659	30504318	chr8:30453659-30504318	0	+	30453659	30453659	8553170	5	146,78,39,63,33,	0,21119,24139,25655,50626,
#Partially deleted in new
chr8	30474785	30570700	chr8:30474785-30570700	0	+	30474785	30537612	789624	9	71,39,63,151,146,131,70,104,64,	0,3013,4529,29500,62792,69708,84101,91471,95851,
#Partially deleted in new
chr8	30479329	30547517	chr8:30479329-30547517	0	+	30479329	30545175	789624	5	48,151,131,57,226,	0,24956,65164,65834,67962,
#Partially deleted in new
chr8	30545199	30547519	chr8:30545199-30547519	0	+	30545199	30545199	8553170	2	266,228,	0,2092,
#Deleted in new
chr8	30552344	30553766	chr8:30552344-30553766	3	+	30552344	30552344	8553170	1	1422,	0,
#Partially deleted in new
chr8	30556452	30570761	chr8:30556452-30570761	0	+	30556452	30556452	8553170	4	346,70,104,125,	0,2434,9804,14184,
#Partially deleted in new
chr8	30556636	30570757	chr8:30556636-30570757	0	+	30556636	30556636	8553170	4	158,70,104,121,	0,2250,9620,14000,
#Partially deleted in new
chr8	30558180	30570761	chr8:30558180-30570761	0	+	30558180	30558180	8553170	3	776,104,125,	0,8076,12456,
#Deleted in new
chr8	30564049	30570994	chr8:30564049-30570994	0	+	30564049	30564049	8553170	2	2311,358,	0,6587,
#Deleted in new
chr8	30564366	30570761	chr8:30564366-30570761	0	+	30564366	30564366	8553170	3	86,104,125,	0,1890,6270,
#Partially deleted in new
chr8	30578317	30658251	chr8:30578317-30658251	3	-	30578920	30653598	0	8	720,116,94,183,108,92,170,279,	0,1963,28739,33981,36290,56714,75115,79655,
#Deleted in new
chr8	30596913	30597532	chr8:30596913-30597532	3	+	30596913	30596913	8553170	2	126,281,	0,338,
#Partially deleted in new
chr8	30607056	30658032	chr8:30607056-30658032	0	-	30636934	30653598	789624	8	94,183,108,92,31,30,170,60,	0,5242,7551,27975,29873,30188,46376,50916,
#Partially deleted in new
chr8	30607103	30657005	chr8:30607103-30657005	0	-	30607103	30653598	789624	6	47,183,108,92,170,137,	0,5195,7504,27928,46329,49765,
#Partially deleted in new
chr8	30612469	30657618	chr8:30612469-30657618	0	-	30612469	30653598	789624	5	12,108,92,170,44,	0,2138,22562,40963,45105,
#Partially deleted in new
chr8	30638599	30646064	chr8:30638599-30646064	3	+	30645309	30645597	789624	3	40,81,784,	0,5892,6681,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	30643688	30643802	chr8:30643688-30643802	3	+	30643688	30643688	8553170	1	114,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr8	30678060	30727999	chr8:30678060-30727999	3	-	30679519	30727835	0	13	1609,134,132,112,159,87,100,55,148,70,89,27,470,	0,2843,3869,6027,11100,14908,18319,22020,25032,30011,31753,34001,49469,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr8	30678368	30727701	chr8:30678368-30727701	0	-	30704852	30727701	789624	14	1301,134,132,112,159,87,100,55,148,218,70,89,27,172,	0,2535,3561,5719,10792,14600,18011,21712,24724,26278,29703,31445,33693,49161,
#Partially deleted in new
chr8	30679519	30727835	chr8:30679519-30727835	1	-	30679519	30727835	0	11	150,134,132,112,100,55,148,70,89,27,306,	0,1384,2410,4568,16860,20561,23573,28552,30294,32542,48010,
#Partially deleted in new
chr8	30679519	30727835	chr8:30679519-30727835	1	-	30679519	30727835	0	12	150,134,132,112,87,100,55,148,70,89,27,306,	0,1384,2410,4568,13449,16860,20561,23573,28552,30294,32542,48010,
#Partially deleted in new
chr8	30679519	30727835	chr8:30679519-30727835	1	-	30679519	30727835	0	12	150,134,132,112,159,100,55,148,70,89,27,306,	0,1384,2410,4568,9641,16860,20561,23573,28552,30294,32542,48010,
#Partially deleted in new
chr8	30681930	30727667	chr8:30681930-30727667	0	-	30696407	30727667	789624	9	131,112,159,87,100,70,89,27,138,	0,2157,7230,11038,14449,26141,27883,30131,45599,
#Partially deleted in new
chr8	30696404	30727010	chr8:30696404-30727010	0	-	30696404	30696404	8553170	7	75,55,148,70,89,27,118,	0,3676,6688,11667,13409,15657,30488,
#Partially deleted in new
chr8	30744164	30767006	chr8:30744164-30767006	3	+	30744189	30766394	789624	8	113,123,71,123,123,42,75,780,	0,7231,8870,10500,12600,16723,19108,22062,
#Partially deleted in new
chr8	30744173	30767006	chr8:30744173-30767006	0	+	30744189	30744318	789624	8	287,123,71,123,123,42,75,780,	0,7222,8861,10491,12591,16714,19099,22053,
#Partially deleted in new
chr8	30744188	30766905	chr8:30744188-30766905	1	+	30744189	30766394	789624	7	89,123,71,123,42,75,679,	0,7207,8846,12576,16699,19084,22038,
#Partially deleted in new
chr8	30744189	30766394	chr8:30744189-30766394	1	+	30744189	30766394	789624	8	88,12,71,123,123,42,75,168,	0,7317,8845,10475,12575,16698,19083,22037,
#Partially deleted in new
chr8	30751396	30763322	chr8:30751396-30763322	0	+	30751396	30756769	789624	6	122,71,85,123,42,50,	0,1638,3268,5368,9491,11876,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	30754235	30754539	chr8:30754235-30754539	7	-	30754235	30754235	16724991	1	304,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	30756118	30766475	chr8:30756118-30766475	0	+	30756118	30756118	8553170	5	165,123,42,75,249,	0,646,4769,7154,10108,
#Partially deleted in new
chr8	30763145	30766552	chr8:30763145-30766552	0	+	30763145	30763145	8553170	2	202,326,	0,3081,
#Partially deleted in new
chr8	30785609	30812872	chr8:30785609-30812872	3	-	30786234	30812421	789624	7	698,119,162,90,174,210,553,	0,5587,8307,8582,11971,13936,26710,
#Partially deleted in new
chr8	30785615	30812597	chr8:30785615-30812597	1	-	30785986	30812421	789624	3	374,39,278,	0,14101,26704,
#Partially deleted in new
chr8	30786108	30791563	chr8:30786108-30791563	0	-	30786108	30786108	8553170	2	199,367,	0,5088,
#Deleted in new
chr8	30786128	30786488	chr8:30786128-30786488	0	-	30786128	30786128	8553170	2	179,57,	0,303,
#Partially deleted in new
chr8	30790989	30794281	chr8:30790989-30794281	0	-	30791192	30794281	789624	3	326,162,90,	0,2927,3202,
#Partially deleted in new
chr8	30793115	30794490	chr8:30793115-30794490	0	-	30793115	30793115	8553170	2	963,299,	0,1076,
#Partially deleted in new
chr8	30793961	30812878	chr8:30793961-30812878	0	-	30793961	30812853	789624	5	117,90,174,103,93,	0,230,3619,5584,18824,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	30794197	30810276	chr8:30794197-30810276	0	-	30794197	30799662	789624	4	84,174,210,287,	0,3383,5348,15792,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	30799580	30814314	chr8:30799580-30814314	0	-	30799580	30799580	8553170	2	175,428,	0,14306,
#Partially deleted in new
chr8	30831543	30888706	chr8:30831543-30888706	3	-	30833285	30888638	789624	10	1780,1259,59,7313,163,147,238,166,145,71,	0,5259,8362,10460,27124,28367,35721,43393,55623,57092,
#Partially deleted in new
chr8	30831545	30849017	chr8:30831545-30849017	1	-	30833285	30849017	789624	4	1778,1259,59,7014,	0,5257,8360,10458,
#Partially deleted in new
chr8	30832966	30913003	chr8:30832966-30913003	1	-	30833285	30887302	789624	11	357,1259,59,7313,163,147,238,166,145,76,125,	0,3836,6939,9037,25701,26944,34298,41970,54200,65775,79912,
#Deleted in new
chr8	30921059	30921335	chr8:30921059-30921335	7	+	30921059	30921059	16724991	1	276,	0,
#Deleted in new
chr8	30983458	30984321	chr8:30983458-30984321	7	-	30983458	30983458	16724991	1	863,	0,
#Partially deleted in new
chr8	30995801	31033715	chr8:30995801-31033715	1	-	30996592	31032782	789624	2	896,1797,	0,36117,
#Deleted in new
chr8	31030840	31033715	chr8:31030840-31033715	3	-	31031738	31032782	789624	1	2875,	0,
#Deleted in new
chr8	31032291	31033194	chr8:31032291-31033194	0	-	31032291	31032782	789624	2	497,117,	0,786,
#Partially deleted in new
chr8	31033800	31173769	chr8:31033800-31173769	3	+	31058447	31173102	0	35	173,172,113,146,149,150,70,115,430,81,81,145,76,68,109,69,83,107,185,175,182,102,93,142,171,95,76,74,76,113,115,132,163,209,775,	0,24571,25352,30488,31114,33232,34457,42372,47066,49898,51365,53975,55089,56664,57033,58029,62967,67048,77814,82553,86442,90721,91107,98564,107629,107880,108825,109749,113252,113563,116540,120823,123567,133221,139194,
#Partially deleted in new
chr8	31087643	31173763	chr8:31087643-31173763	0	+	31087643	31087643	8553170	23	277,76,109,69,83,107,185,175,182,102,93,142,171,95,76,74,76,113,115,132,163,209,769,	0,1246,3190,4186,9124,13205,23971,28710,32599,36878,37264,44721,53786,54037,54982,55906,59409,59720,62697,66980,69724,79378,85351,
#Partially deleted in new
chr8	31119955	31124965	chr8:31119955-31124965	0	+	31119955	31119955	8553170	3	469,102,58,	0,4566,4952,
#Partially deleted in new
chr8	31131538	31131802	chr8:31131538-31131802	7	-	31131538	31131538	16724991	1	264,	0,
#Partially deleted in new
chr8	31167077	31176872	chr8:31167077-31176872	0	-	31167077	31167077	8553170	2	115,181,	0,9614,
#Deleted in new
chr8	31219893	31220984	chr8:31219893-31220984	7	-	31219893	31219893	16724991	2	484,466,	0,625,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	31275595	31384279	chr8:31275595-31384279	3	+	31275595	31275595	8553170	2	213,123,	0,108561,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	31339196	31344429	chr8:31339196-31344429	3	+	31339196	31339196	8553170	4	180,211,134,299,	0,2466,4485,4934,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	31343671	31344633	chr8:31343671-31344633	0	+	31343671	31343671	8553170	2	144,503,	0,459,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	31343694	31346479	chr8:31343694-31346479	1	+	31343694	31343694	8553170	2	121,190,	0,2595,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	31497422	31498612	chr8:31497422-31498612	3	+	31497422	31497422	8553170	2	134,194,	0,996,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	31598098	31598204	chr8:31598098-31598204	7	-	31598098	31598098	16724991	1	106,	0,
#Partially deleted in new
chr8	31639385	32764022	chr8:31639385-32764022	0	+	31639394	32764022	789624	12	46,178,122,51,130,59,24,103,127,131,207,275,	0,956442,966176,975128,1088563,1103289,1110175,1114986,1117017,1119920,1120814,1124362,
#Partially deleted in new
chr8	31639385	32764405	chr8:31639385-32764405	3	+	31639394	32764402	0	11	46,178,122,130,59,24,103,127,131,207,658,	0,956442,966176,1088563,1103289,1110175,1114986,1117017,1119920,1120814,1124362,
#Partially deleted in new
chr8	31639754	32743224	chr8:31639754-32743224	1	+	31639984	32742768	0	5	975,178,122,130,550,	0,956073,965807,1088194,1102920,
#Deleted in new
chr8	31639984	31641769	chr8:31639984-31641769	1	+	31639984	31641769	789624	2	745,17,	0,1768,
#Partially deleted in new
chr8	31640425	32764776	chr8:31640425-32764776	0	+	31640425	32764402	789624	13	304,178,122,51,51,130,59,24,103,127,131,207,1029,	0,955402,965136,974088,976409,1087523,1102249,1109135,1113946,1115977,1118880,1119774,1123322,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	32026218	32099765	chr8:32026218-32099765	1	+	32026218	32026218	8553170	4	146,107,121,368,	0,3160,72462,73179,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	32026230	32063472	chr8:32026230-32063472	1	+	32026230	32026230	8553170	4	134,107,148,369,	0,3148,35455,36873,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	32026326	32139277	chr8:32026326-32139277	3	+	32026326	32026326	8553170	4	38,107,84,63,	0,3052,4049,112888,
#Partially deleted in new
chr8	32136660	32139475	chr8:32136660-32139475	0	+	32136660	32136660	8553170	2	91,261,	0,2554,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	32192027	32192153	chr8:32192027-32192153	7	-	32192027	32192027	16724991	1	126,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	32220927	32287447	chr8:32220927-32287447	0	+	32220927	32220927	8553170	2	206,347,	0,66173,
#Partially deleted in new
chr8	32221041	32728077	chr8:32221041-32728077	0	+	32221084	32728077	789624	6	92,178,122,51,51,129,	0,374786,384520,393472,395793,506907,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	32256495	32256623	chr8:32256495-32256623	7	+	32256495	32256495	16724991	1	128,	0,
#Partially deleted in new
chr8	32440745	32442725	chr8:32440745-32442725	3	+	32440745	32440745	789624	3	36,211,258,	0,480,1722,
#Partially deleted in new
chr8	32548209	32760989	chr8:32548209-32760989	1	+	32548726	32760410	0	11	617,178,122,51,51,130,59,103,127,131,790,	0,47618,57352,66304,68625,179739,194465,206162,208193,211096,211990,
#Partially deleted in new
chr8	32548266	32767959	chr8:32548266-32767959	1	+	32548726	32764402	0	12	560,178,122,51,51,130,59,103,127,131,207,4212,	0,47561,57295,66247,68568,179682,194408,206105,208136,211039,211933,215481,
#Partially deleted in new
chr8	32548618	32763998	chr8:32548618-32763998	1	+	32548726	32763338	0	13	208,178,122,51,51,130,68,103,127,131,207,142,251,	0,47209,56943,65895,68216,179330,193389,205753,207784,210687,211581,214599,215129,
#Partially deleted in new
chr8	32548634	32764407	chr8:32548634-32764407	1	+	32548726	32764402	0	13	192,178,122,51,51,130,59,24,103,127,131,207,660,	0,47193,56927,65879,68200,179314,194040,200926,205737,207768,210671,211565,215113,
#Partially deleted in new
chr8	32548726	32764471	chr8:32548726-32764471	1	+	32548726	32764402	0	12	100,178,122,51,51,130,68,103,127,131,207,724,	0,47101,56835,65787,68108,179222,193281,205645,207676,210579,211473,215021,
#Partially deleted in new
chr8	32605647	32743224	chr8:32605647-32743224	0	+	32605647	32742718	789624	6	36,51,51,130,68,550,	0,8866,11187,122301,136360,137027,
#Partially deleted in new
chr8	32614374	32756528	chr8:32614374-32756528	0	+	32614374	32614374	8553170	6	190,51,130,59,103,126,	0,2460,113574,128300,139997,142028,
#Partially deleted in new
chr8	32647717	32743207	chr8:32647717-32743207	1	+	32647717	32742768	0	3	667,130,533,	0,80231,94957,
#Partially deleted in new
chr8	32647837	32743221	chr8:32647837-32743221	0	+	32647837	32742718	789624	2	547,547,	0,94837,
#Partially deleted in new
chr8	32721752	32754423	chr8:32721752-32754423	0	+	32722002	32754423	789624	5	290,130,59,24,52,	0,6196,20922,27808,32619,
#Partially deleted in new
chr8	32721818	32756447	chr8:32721818-32756447	0	+	32722002	32756447	789624	5	224,130,68,103,45,	0,6130,20189,32553,34584,
#Partially deleted in new
chr8	32721832	32765030	chr8:32721832-32765030	1	+	32722002	32763338	789624	9	210,130,68,103,127,131,207,142,1283,	0,6116,20175,32539,34570,37473,38367,41385,41915,
#Partially deleted in new
chr8	32721844	32756475	chr8:32721844-32756475	0	+	32722002	32756475	789624	5	198,130,59,103,73,	0,6104,20830,32527,34558,
#Deleted in new
chr8	32748823	32751155	chr8:32748823-32751155	0	+	32748823	32748823	8553170	2	1080,93,	0,2239,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	32911492	32911598	chr8:32911492-32911598	3	-	32911492	32911492	8553170	1	106,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	32996177	33044855	chr8:32996177-33044855	3	+	32996177	32996177	8553170	3	139,109,489,	0,45457,48189,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	32996177	33044802	chr8:32996177-33044802	0	+	32996177	32996177	8553170	3	139,137,436,	0,45457,48189,
#Deleted in new
chr8	33014080	33015026	chr8:33014080-33015026	7	+	33014080	33014080	16724991	1	946,	0,
#Partially deleted in new
chr8	33015260	33017043	chr8:33015260-33017043	7	+	33015260	33015260	16724991	2	668,370,	0,1413,
#Deleted in new
chr8	33039522	33039793	chr8:33039522-33039793	7	+	33039522	33039522	16724991	1	271,	0,
#Deleted in new
chr8	33226847	33227147	chr8:33226847-33227147	7	-	33226847	33226847	16724991	1	300,	0,
#Deleted in new
chr8	33338866	33338966	chr8:33338866-33338966	3	+	33338866	33338866	8553170	1	100,	0,
#Deleted in new
chr8	33360838	33361415	chr8:33360838-33361415	3	-	33360838	33360838	8553170	1	577,	0,
#Partially deleted in new
chr8	33370823	33473422	chr8:33370823-33473422	3	-	33372576	33461452	789624	5	1981,836,295,354,359,	0,18139,82392,90548,102240,
#Partially deleted in new
chr8	33371060	33461727	chr8:33371060-33461727	1	-	33372576	33453507	789624	4	1744,836,295,240,	0,17902,82155,90427,
#Partially deleted in new
chr8	33371828	33377556	chr8:33371828-33377556	0	-	33371828	33371828	8553170	3	383,161,39,	0,815,5689,
#Partially deleted in new
chr8	33372078	33389250	chr8:33372078-33389250	0	-	33372078	33372078	8553170	3	133,161,288,	0,565,16884,
#Partially deleted in new
chr8	33372263	33473119	chr8:33372263-33473119	1	-	33372576	33453507	789624	5	541,836,295,314,56,	0,16699,80952,89148,100800,
#Partially deleted in new
chr8	33372381	33377580	chr8:33372381-33377580	0	-	33372381	33372381	8553170	2	423,63,	0,5136,
#Partially deleted in new
chr8	33388895	33473134	chr8:33388895-33473134	0	-	33388895	33388895	8553170	4	903,295,354,71,	0,64320,72476,84168,
#Partially deleted in new
chr8	33388962	33455821	chr8:33388962-33455821	0	-	33388962	33388962	8553170	4	836,38,295,52,	0,5255,64253,66807,
#Deleted in new
chr8	33436267	33436700	chr8:33436267-33436700	7	-	33436267	33436267	16724991	1	433,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	33451727	33473113	chr8:33451727-33473113	0	-	33451727	33451727	8553170	3	1783,354,50,	0,9644,21336,
#Partially deleted in new
chr8	33453073	33455832	chr8:33453073-33455832	0	-	33453073	33453073	8553170	2	437,63,	0,2696,
#Partially deleted in new
chr8	33453381	33473091	chr8:33453381-33473091	0	-	33453381	33453381	8553170	4	129,60,354,28,	0,7330,7990,19682,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	33473385	33509785	chr8:33473385-33509785	0	-	33473385	33473385	8553170	6	1043,163,144,188,93,40,	0,26942,30043,30362,33843,36360,
#Partially deleted in new
chr8	33484749	33501260	chr8:33484749-33501260	3	+	33485206	33498629	789624	10	472,50,110,65,152,55,75,117,66,2829,	0,3628,3770,3984,4238,5535,10792,11875,12482,13682,
#Partially deleted in new
chr8	33485181	33489012	chr8:33485181-33489012	0	+	33485181	33485181	8553170	3	40,50,493,	0,3196,3338,
#Partially deleted in new
chr8	33485181	33489291	chr8:33485181-33489291	0	+	33485181	33485181	8553170	5	40,50,110,65,304,	0,3196,3338,3552,3806,
#Partially deleted in new
chr8	33485199	33498646	chr8:33485199-33498646	0	+	33485199	33495554	789624	9	22,50,110,65,152,75,117,66,215,	0,3178,3320,3534,3788,10342,11425,12032,13232,
#Partially deleted in new
chr8	33485206	33488602	chr8:33485206-33488602	0	+	33485206	33485206	8553170	3	425,50,83,	0,3171,3313,
#Partially deleted in new
chr8	33498508	33513185	chr8:33498508-33513185	3	-	33499172	33512613	789624	8	769,163,144,188,93,187,746,226,	0,1819,4920,5239,8720,11237,13458,14451,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	33498953	33513109	chr8:33498953-33513109	1	-	33499172	33512613	789624	7	324,163,144,188,93,187,1143,	0,1374,4475,4794,8275,10792,13013,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	33498955	33513601	chr8:33498955-33513601	1	-	33499172	33512613	789624	8	322,163,144,188,93,187,746,520,	0,1372,4473,4792,8273,10790,13011,14126,
#Partially deleted in new
chr8	33499117	33512712	chr8:33499117-33512712	1	-	33499172	33512613	789624	6	160,163,144,188,187,746,	0,1210,4311,4630,10628,12849,
#Partially deleted in new
chr8	33512310	33513119	chr8:33512310-33513119	0	-	33512310	33512613	789624	3	402,45,38,	0,649,771,
#Deleted in new
chr8	33523153	33523291	chr8:33523153-33523291	7	+	33523153	33523153	16724991	1	138,	0,
#Partially deleted in new
chr8	33540039	33540137	chr8:33540039-33540137	3	+	33540039	33540039	8553170	1	98,	0,
#Partially deleted in new
chr8	33540184	33540493	chr8:33540184-33540493	7	+	33540184	33540184	16724991	1	309,	0,
#Partially deleted in new
chr8	33547754	33567125	chr8:33547754-33567125	3	-	33548752	33566723	789624	6	1113,83,42,46,157,427,	0,1655,3289,3589,10860,18944,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	33580209	33580508	chr8:33580209-33580508	3	-	33580209	33580209	8553170	1	299,	0,
#Partially deleted in new
chr8	33591331	33600106	chr8:33591331-33600106	3	-	33592012	33597515	0	4	881,215,297,442,	0,2201,5963,8333,
#Partially deleted in new
chr8	33591847	33599978	chr8:33591847-33599978	1	-	33592012	33597515	0	4	365,215,479,314,	0,1685,5447,7817,
#Partially deleted in new
chr8	33593531	33597807	chr8:33593531-33597807	0	-	33593531	33597515	789624	2	216,513,	0,3763,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	33604855	34038485	chr8:33604855-34038485	3	+	33604855	33604855	8553170	6	61,300,143,100,39,123,	0,5903,191438,403000,430030,433507,
#Partially deleted in new
chr8	33641580	33641939	chr8:33641580-33641939	7	-	33641580	33641580	16724991	1	359,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	33715783	33716070	chr8:33715783-33716070	3	+	33715783	33715783	8553170	1	287,	0,
#Deleted in new
chr8	33722304	33723079	chr8:33722304-33723079	7	-	33722304	33722304	16724991	1	775,	0,
#Deleted in new
chr8	33859479	33860223	chr8:33859479-33860223	7	-	33859479	33859479	16724991	1	744,	0,
#Deleted in new
chr8	33969566	33969879	chr8:33969566-33969879	7	-	33969566	33969566	16724991	1	313,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	33973700	34009592	chr8:33973700-34009592	0	-	33973700	33973700	8553170	3	291,49,71,	0,1794,35821,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	34007855	34038923	chr8:34007855-34038923	0	+	34007855	34007855	8553170	2	100,561,	0,30507,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	34007856	34039008	chr8:34007856-34039008	1	+	34007856	34007856	8553170	3	99,39,646,	0,27029,30506,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	34174885	34184895	chr8:34174885-34184895	3	+	34174885	34174885	8553170	2	128,409,	0,9601,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	34228438	34346731	chr8:34228438-34346731	3	+	34228438	34228438	8553170	5	74,128,80,153,147,	0,982,68820,111621,118146,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	34229293	34248946	chr8:34229293-34248946	3	-	34229293	34229293	8553170	2	207,223,	0,19430,
#Deleted in new
chr8	34322991	34323642	chr8:34322991-34323642	7	-	34322991	34322991	16724991	1	651,	0,
#Partially deleted in new
chr8	34784051	34864798	chr8:34784051-34864798	0	+	34784051	34784051	789624	4	45,208,134,142,	0,8706,35220,80605,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	34784811	34837969	chr8:34784811-34837969	3	+	34784811	34784811	8553170	4	260,208,134,389,	0,7946,34460,52769,
#Deleted in new
chr8	34874158	34874633	chr8:34874158-34874633	7	+	34874158	34874158	16724991	1	475,	0,
#Partially deleted in new
chr8	35235456	35790625	chr8:35235456-35790625	3	+	35235784	35790563	789624	17	431,219,144,104,181,168,165,33,186,378,85,169,228,150,165,179,267,	0,313835,332641,360097,448090,449125,451088,470472,486753,490695,495555,513070,515125,523863,531445,538842,554902,
#Partially deleted in new
chr8	35235764	35796550	chr8:35235764-35796550	1	+	35235784	35790563	789624	16	123,219,144,104,181,165,33,147,378,85,169,228,150,165,179,6192,	0,313527,332333,359789,447782,450780,470164,486445,490387,495247,512762,514817,523555,531137,538534,554594,
#Partially deleted in new
chr8	35235764	35790848	chr8:35235764-35790848	1	+	35235784	35790563	789624	15	123,219,144,104,181,165,186,378,85,169,228,150,165,179,490,	0,313527,332333,359789,447782,450780,486445,490387,495247,512762,514817,523555,531137,538534,554594,
#Partially deleted in new
chr8	35235774	35791208	chr8:35235774-35791208	1	+	35235784	35790563	789624	18	113,219,144,104,181,168,165,33,15,186,378,85,169,228,150,165,179,850,	0,313517,332323,359779,447772,448807,450770,470154,485680,486435,490377,495237,512752,514807,523545,531127,538524,554584,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	35254343	35256605	chr8:35254343-35256605	3	+	35254343	35254343	8553170	1	2262,	0,
#Deleted in new
chr8	35525175	35525763	chr8:35525175-35525763	7	-	35525175	35525175	16724991	1	588,	0,
#Partially deleted in new
chr8	35544391	35794662	chr8:35544391-35794662	1	+	35544447	35790563	789624	17	144,219,144,104,181,168,165,33,186,378,85,169,228,150,165,179,4304,	0,4900,23706,51162,139155,140190,142153,161537,177818,181760,186620,204135,206190,214928,222510,229907,245967,
#Partially deleted in new
chr8	35683581	35727867	chr8:35683581-35727867	0	+	35683581	35683581	8553170	5	146,168,165,186,1716,	0,1000,2963,38628,42570,
#Partially deleted in new
chr8	35724150	35791310	chr8:35724150-35791310	1	+	35724261	35790563	789624	9	142,378,85,169,228,150,165,179,952,	0,2001,6861,24376,26431,35169,42751,50148,66208,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	36004315	36095046	chr8:36004315-36095046	0	-	36004315	36004315	8553170	3	277,48,35,	0,89662,90696,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	36004319	36094009	chr8:36004319-36094009	3	-	36004319	36004319	8553170	3	273,82,32,	0,30547,89658,
#Partially deleted in new
chr8	36121397	36121683	chr8:36121397-36121683	7	-	36121397	36121397	16724991	1	286,	0,
#Deleted in new
chr8	36277762	36278886	chr8:36277762-36278886	7	-	36277762	36277762	16724991	1	1124,	0,
#Deleted in new
chr8	36278959	36279483	chr8:36278959-36279483	7	+	36278959	36278959	16724991	1	524,	0,
#Deleted in new
chr8	36279490	36279696	chr8:36279490-36279696	7	-	36279490	36279490	16724991	1	206,	0,
#Deleted in new
chr8	36308244	36308364	chr8:36308244-36308364	7	+	36308244	36308244	16724991	1	120,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	36309583	36309690	chr8:36309583-36309690	3	-	36309583	36309583	8553170	1	107,	0,
#Deleted in new
chr8	36321038	36321404	chr8:36321038-36321404	7	-	36321038	36321038	16724991	2	42,258,	0,108,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	36537390	36779164	chr8:36537390-36779164	3	-	36537390	36537390	8553170	5	86,73,149,135,127,	0,164430,227666,236755,241647,
#Deleted in new
chr8	36581179	36581591	chr8:36581179-36581591	7	-	36581179	36581179	16724991	1	412,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	36764444	36764551	chr8:36764444-36764551	7	+	36764444	36764444	16724991	1	107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	36764953	36779164	chr8:36764953-36779164	0	-	36764953	36764953	8553170	3	252,135,127,	0,9192,14084,
#Partially deleted in new
chr8	36784323	36814400	chr8:36784323-36814400	0	+	36784410	36814400	789624	8	282,120,62,91,112,76,76,194,	0,2982,19703,20871,21945,23051,24394,29883,
#Partially deleted in new
chr8	36784373	36936128	chr8:36784373-36936128	3	+	36784410	36935920	0	27	232,120,62,91,112,76,76,171,92,111,106,83,70,153,113,72,90,98,118,97,225,190,75,140,195,113,614,	0,2932,19653,20821,21895,23001,24344,29833,31222,33276,49180,50412,51922,52419,56089,56558,61206,61428,80030,121334,124937,126556,134449,138116,146577,148546,151141,
#Partially deleted in new
chr8	36784382	36936125	chr8:36784382-36936125	0	+	36784410	36930996	789624	28	223,120,62,91,112,76,76,171,92,111,106,83,70,153,113,72,90,98,118,97,225,190,75,140,62,195,113,611,	0,2923,19644,20812,21886,22992,24335,29824,31213,33267,49171,50403,51913,52410,56080,56549,61197,61419,80021,121325,124928,126547,134440,138107,138600,146568,148537,151132,
#Partially deleted in new
chr8	36784398	36807404	chr8:36784398-36807404	0	+	36784410	36805221	789624	5	207,120,91,112,30,	0,2907,20796,21870,22976,
#Deleted in new
chr8	36795254	36795862	chr8:36795254-36795862	7	-	36795254	36795254	16724991	1	608,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	36888481	36889307	chr8:36888481-36889307	7	+	36888481	36888481	16724991	2	423,132,	0,694,
#Partially deleted in new
chr8	36928904	36931145	chr8:36928904-36931145	1	+	36928973	36931036	789624	2	139,195,	0,2046,
#Deleted in new
chr8	36987976	36988412	chr8:36987976-36988412	7	-	36987976	36987976	16724991	1	436,	0,
#Partially deleted in new
chr8	37067440	37069418	chr8:37067440-37069418	3	-	37067440	37067440	8553170	2	522,117,	0,1861,
#Partially deleted in new
chr8	37095149	37095390	chr8:37095149-37095390	7	+	37095149	37095149	16724991	1	241,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	37326574	37330837	chr8:37326574-37330837	0	-	37326574	37326574	8553170	2	2258,1434,	0,2829,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	37330671	37331984	chr8:37330671-37331984	3	-	37330671	37330671	8553170	2	495,218,	0,1095,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	37405438	37406724	chr8:37405438-37406724	3	-	37405438	37405438	8553170	2	549,29,	0,1257,
#Partially deleted in new
chr8	37421340	37493913	chr8:37421340-37493913	1	-	37421340	37421340	789624	6	229,45,39,133,171,476,	0,9791,10408,51737,54501,72097,
#Partially deleted in new
chr8	37421403	37493834	chr8:37421403-37493834	0	-	37421403	37421403	8553170	3	166,171,397,	0,54438,72034,
#Partially deleted in new
chr8	37475953	37554067	chr8:37475953-37554067	0	-	37475953	37475953	8553170	3	59,94,46,	0,53143,78068,
#Deleted in new
chr8	37480088	37480809	chr8:37480088-37480809	3	+	37480088	37480088	8553170	2	131,38,	0,683,
#Deleted in new
chr8	37516409	37517021	chr8:37516409-37517021	3	-	37516409	37516409	8553170	2	291,219,	0,393,
#Partially deleted in new
chr8	37560365	37565377	chr8:37560365-37565377	3	+	37560365	37560365	8553170	3	261,92,494,	0,4315,4518,
#Partially deleted in new
chr8	37597479	37599858	chr8:37597479-37599858	3	-	37597479	37597479	8553170	1	2379,	0,
#Partially deleted in new
chr8	37597634	37598778	chr8:37597634-37598778	1	-	37597634	37597634	8553170	2	102,295,	0,849,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	37600536	37625873	chr8:37600536-37625873	3	-	37600536	37600536	8553170	5	191,80,67,78,135,	0,2257,2443,2805,25202,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	37626014	37674387	chr8:37626014-37674387	3	-	37626014	37626014	8553170	2	410,426,	0,47947,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	37668897	37669005	chr8:37668897-37669005	3	+	37668897	37668897	8553170	1	108,	0,
#Deleted in new
chr8	37695750	37700021	chr8:37695750-37700021	3	+	37695979	37698674	789624	2	472,2877,	0,1394,
#Partially deleted in new
chr8	37717578	37733756	chr8:37717578-37733756	3	+	37717578	37717578	789624	3	418,131,679,	0,9581,15499,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	37734760	37737426	chr8:37734760-37737426	3	-	37734760	37734760	789624	2	2038,48,	0,2618,
#Partially deleted in new
chr8	37736600	37740714	chr8:37736600-37740714	0	+	37736600	37736600	8553170	3	78,122,350,	0,1307,3764,
#Partially deleted in new
chr8	37736614	37746522	chr8:37736614-37746522	1	+	37737922	37745603	789624	7	64,122,82,47,62,126,954,	0,1293,3750,5157,7740,7956,8954,
#Partially deleted in new
chr8	37736622	37751697	chr8:37736622-37751697	0	+	37737922	37751697	789624	8	56,122,62,126,74,59,92,72,	0,1285,7732,7948,12936,13171,13772,15003,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	37736624	37746550	chr8:37736624-37746550	1	+	37737922	37744893	789624	6	54,122,82,47,62,1980,	0,1283,3740,5147,7730,7946,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	37736626	37759101	chr8:37736626-37759101	3	+	37737922	37754115	789624	12	52,122,82,47,62,126,74,59,92,90,80,5187,	0,1281,3738,5145,7728,7944,12932,13167,13768,14999,16823,17288,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	37736633	37757801	chr8:37736633-37757801	1	+	37737922	37754115	789624	12	45,122,82,47,62,126,74,59,92,90,80,3887,	0,1274,3731,5138,7721,7937,12925,13160,13761,14992,16816,17281,
#Partially deleted in new
chr8	37736633	37746550	chr8:37736633-37746550	1	+	37737922	37745603	8553170	7	45,122,82,47,62,126,982,	0,1274,3731,5138,7721,7937,8935,
#Partially deleted in new
chr8	37736642	37750163	chr8:37736642-37750163	0	+	37736642	37736642	8553170	7	36,82,47,62,126,74,370,	0,3722,5129,7712,7928,12916,13151,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	37736680	37746553	chr8:37736680-37746553	1	+	37737922	37744893	789624	6	327,122,82,47,62,1983,	0,1227,3684,5091,7674,7890,
#Partially deleted in new
chr8	37736684	37746548	chr8:37736684-37746548	1	+	37737922	37745603	789624	7	323,122,82,47,62,126,980,	0,1223,3680,5087,7670,7886,8884,
#Partially deleted in new
chr8	37736691	37754111	chr8:37736691-37754111	0	+	37737922	37754111	789624	12	571,122,82,47,62,126,74,59,92,90,80,197,	0,1216,3673,5080,7663,7879,12867,13102,13703,14934,16758,17223,
#Partially deleted in new
chr8	37737007	37744921	chr8:37737007-37744921	1	+	37737922	37744893	789624	6	107,122,82,47,62,351,	0,900,3357,4764,7347,7563,
#Partially deleted in new
chr8	37737609	37744416	chr8:37737609-37744416	0	+	37737609	37737609	8553170	3	420,82,62,	0,2755,6745,
#Deleted in new
chr8	37747337	37748004	chr8:37747337-37748004	7	-	37747337	37747337	16724991	1	667,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	37762592	37779767	chr8:37762592-37779767	3	+	37762659	37778104	789624	8	166,108,36,76,135,143,99,1795,	0,2933,3118,3687,10162,12746,13325,15380,
#Partially deleted in new
chr8	37762594	37766741	chr8:37762594-37766741	0	+	37762594	37762594	8553170	4	164,108,36,462,	0,2931,3116,3685,
#Partially deleted in new
chr8	37762599	37775451	chr8:37762599-37775451	0	+	37765582	37775451	789624	6	101,108,36,76,135,113,	0,2926,3111,3680,10155,12739,
#Partially deleted in new
chr8	37762599	37772891	chr8:37762599-37772891	0	+	37762659	37772891	789624	5	159,108,36,76,137,	0,2926,3111,3680,10155,
#Partially deleted in new
chr8	37762609	37772866	chr8:37762609-37772866	0	+	37762659	37765651	789624	4	149,221,76,112,	0,2916,3670,10145,
#Partially deleted in new
chr8	37762654	37766716	chr8:37762654-37766716	0	+	37762654	37762654	8553170	5	104,108,36,76,235,	0,2871,3056,3625,3827,
#Partially deleted in new
chr8	37766279	37775481	chr8:37766279-37775481	0	+	37766279	37775481	789624	3	76,135,173,	0,6475,9029,
#Partially deleted in new
chr8	37772752	37775473	chr8:37772752-37775473	0	+	37772752	37772752	8553170	2	137,135,	0,2586,
#Partially deleted in new
chr8	37774935	37778080	chr8:37774935-37778080	0	+	37774935	37774935	8553170	3	546,99,108,	0,982,3037,
#Partially deleted in new
chr8	37784190	37829993	chr8:37784190-37829993	0	+	37784190	37829993	789624	6	140,72,72,72,72,143,	0,30705,44697,45070,45297,45660,
#Partially deleted in new
chr8	37796905	37844896	chr8:37796905-37844896	1	+	37797268	37842355	789624	16	629,72,72,72,72,164,214,165,199,150,162,128,124,146,90,3811,	0,17990,31982,32355,32582,32945,33804,34517,36104,36782,37061,42050,42593,43215,43854,44180,
#Partially deleted in new
chr8	37797255	37843976	chr8:37797255-37843976	3	+	37797268	37842355	789624	19	279,72,72,72,72,164,214,165,199,150,162,225,217,209,128,124,146,90,2891,	0,17640,31632,32005,32232,32595,33454,34167,35754,36432,36711,37918,38298,40475,41700,42243,42865,43504,43830,
#Partially deleted in new
chr8	37843267	37849904	chr8:37843267-37849904	3	-	37844489	37849783	0	4	1946,322,60,275,	0,3586,5328,6362,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	37844701	37849838	chr8:37844701-37849838	1	-	37845701	37849783	789624	5	512,89,322,60,209,	0,984,2152,3894,4928,
#Partially deleted in new
chr8	37846956	37849861	chr8:37846956-37849861	1	-	37847336	37849783	789624	4	219,39,60,232,	0,346,1639,2673,
#Partially deleted in new
chr8	37847055	37849854	chr8:37847055-37849854	0	-	37847336	37849783	789624	4	120,68,60,225,	0,218,1540,2574,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	37858617	37899467	chr8:37858617-37899467	1	-	37862894	37899441	0	5	4496,109,808,443,397,	0,11802,15897,18491,40453,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	37858948	37899454	chr8:37858948-37899454	3	-	37862894	37899441	0	6	4165,109,1902,808,443,384,	0,11471,12329,15566,18160,40122,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	37858948	37861333	chr8:37858948-37861333	3	+	37858948	37858948	8553170	1	2385,	0,
#Partially deleted in new
chr8	37862758	37899454	chr8:37862758-37899454	1	-	37862894	37877478	789624	5	355,109,808,443,151,	0,7661,11756,14350,36545,
#Partially deleted in new
chr8	37862894	37873278	chr8:37862894-37873278	0	-	37862894	37862894	8553170	2	219,2859,	0,7525,
#Partially deleted in new
chr8	37862894	37873278	chr8:37862894-37873278	0	-	37862894	37862894	8553170	3	219,109,2001,	0,7525,8383,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	37870386	37878117	chr8:37870386-37878117	1	-	37870386	37877478	0	3	142,808,1009,	0,4128,6722,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	37908737	37909037	chr8:37908737-37909037	3	+	37908737	37908737	8553170	1	300,	0,
#Partially deleted in new
chr8	37934280	37940129	chr8:37934280-37940129	3	-	37934292	37940029	789624	9	206,143,166,151,93,110,112,182,215,	0,792,1423,2439,2684,2996,3357,4419,5634,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	37934339	37965953	chr8:37934339-37965953	3	-	37935001	37965953	8553170	2	876,689,	0,30925,
#Partially deleted in new
chr8	37934978	37936813	chr8:37934978-37936813	0	-	37935001	37936813	789624	3	237,166,94,	0,725,1741,
#Partially deleted in new
chr8	37937637	37940103	chr8:37937637-37940103	0	-	37937637	37940008	789624	3	112,299,189,	0,1062,2277,
#Partially deleted in new
chr8	37962990	37966965	chr8:37962990-37966965	3	-	37964217	37966469	0	2	1249,1701,	0,2274,
#Deleted in new
chr8	37964973	37966597	chr8:37964973-37966597	0	-	37964973	37964973	8553170	1	1624,	0,
#Partially deleted in new
chr8	37983069	37983373	chr8:37983069-37983373	7	+	37983069	37983069	16724991	1	304,	0,
#Partially deleted in new
chr8	38030340	38060365	chr8:38030340-38060365	3	+	38030573	38059935	0	3	378,180,462,	0,26740,29563,
#Partially deleted in new
chr8	38047338	38060365	chr8:38047338-38060365	0	+	38047338	38047338	8553170	3	53,180,462,	0,9742,12565,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	38062880	38063791	chr8:38062880-38063791	3	+	38062880	38062880	8553170	1	911,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	38099470	38099931	chr8:38099470-38099931	3	+	38099470	38099470	8553170	1	461,	0,
#Partially deleted in new
chr8	38105241	38139965	chr8:38105241-38139965	3	+	38105550	38139071	0	16	497,67,146,89,95,96,96,76,94,218,168,194,93,99,60,1002,	0,1136,1779,5137,5497,8950,9663,11408,14028,15690,23049,23516,28212,30426,33574,33722,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr8	38105492	38140080	chr8:38105492-38140080	1	+	38110394	38139071	789624	15	246,67,89,95,96,96,76,94,218,168,194,93,99,60,1117,	0,885,4886,5246,8699,9412,11157,13777,15439,22798,23265,27961,30175,33323,33471,
#Partially deleted in new
chr8	38105499	38110811	chr8:38105499-38110811	0	+	38105550	38110811	789624	5	239,109,146,89,73,	0,531,1521,4879,5239,
#Partially deleted in new
chr8	38105549	38139523	chr8:38105549-38139523	0	+	38105550	38110760	789624	15	189,67,89,95,96,96,76,94,218,168,194,93,99,60,560,	0,828,4829,5189,8642,9355,11100,13720,15382,22741,23208,27904,30118,33266,33414,
#Partially deleted in new
chr8	38105792	38139703	chr8:38105792-38139703	1	+	38107047	38139071	0	16	347,67,146,89,95,96,96,76,94,218,168,194,93,99,60,740,	0,585,1228,4586,4946,8399,9112,10857,13477,15139,22498,22965,27661,29875,33023,33171,
#Partially deleted in new
chr8	38105938	38139703	chr8:38105938-38139703	1	+	38107047	38139071	0	15	201,67,146,89,95,96,96,76,94,218,168,194,93,60,740,	0,439,1082,4440,4800,8253,8966,10711,13331,14993,22352,22819,27515,32877,33025,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	38110736	38117812	chr8:38110736-38117812	0	+	38110736	38110736	8553170	5	97,96,96,76,361,	0,3455,4168,5913,6715,
#Partially deleted in new
chr8	38114757	38119295	chr8:38114757-38119295	0	+	38114757	38114757	8553170	3	243,76,26,	0,1892,4512,
#Partially deleted in new
chr8	38119094	38128378	chr8:38119094-38128378	0	+	38119094	38119094	8553170	3	269,218,88,	0,1837,9196,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	38122373	38122480	chr8:38122373-38122480	3	+	38122373	38122373	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	38123273	38124651	chr8:38123273-38124651	3	+	38123273	38123273	8553170	2	46,575,	0,803,
#Partially deleted in new
chr8	38128339	38138885	chr8:38128339-38138885	0	+	38128339	38138885	789624	5	119,194,93,99,70,	0,418,5114,7328,10476,
#Partially deleted in new
chr8	38135663	38144076	chr8:38135663-38144076	0	+	38135663	38139071	789624	4	103,60,112,338,	0,3152,3300,8075,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	38137494	38139701	chr8:38137494-38139701	0	+	38137494	38137494	8553170	2	1381,738,	0,1469,
#Partially deleted in new
chr8	38143648	38151265	chr8:38143648-38151265	3	-	38144272	38150818	0	7	738,94,185,159,128,114,511,	0,1573,2314,2640,4551,4992,7106,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	38143651	38150992	chr8:38143651-38150992	0	-	38143651	38143651	8553170	4	2496,159,555,238,	0,2637,4548,7103,
#Partially deleted in new
chr8	38144224	38148754	chr8:38144224-38148754	0	-	38144224	38148754	789624	5	162,185,159,128,114,	0,1738,2064,3975,4416,
#Partially deleted in new
chr8	38146362	38149118	chr8:38146362-38149118	0	-	38146362	38148259	789624	4	85,160,114,43,	0,1837,2278,2713,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	38148740	38163772	chr8:38148740-38163772	3	+	38148740	38148740	8553170	2	99,463,	0,14569,
#Partially deleted in new
chr8	38163320	38176716	chr8:38163320-38176716	3	-	38163669	38176320	789624	4	520,116,69,442,	0,6481,8644,12954,
#Partially deleted in new
chr8	38163334	38176674	chr8:38163334-38176674	1	-	38163820	38176320	789624	3	506,69,400,	0,8630,12940,
#Partially deleted in new
chr8	38163358	38176716	chr8:38163358-38176716	0	-	38163358	38163358	8553170	4	482,116,69,901,	0,6443,8606,12457,
#Partially deleted in new
chr8	38163427	38176730	chr8:38163427-38176730	0	-	38163427	38163427	789624	4	413,116,69,178,	0,6374,8537,13125,
#Partially deleted in new
chr8	38163609	38176488	chr8:38163609-38176488	0	-	38170992	38176320	789624	5	231,116,70,69,214,	0,6192,7333,8355,12665,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	38166011	38166118	chr8:38166011-38166118	3	-	38166011	38166011	8553170	1	107,	0,
#Partially deleted in new
chr8	38176532	38207741	chr8:38176532-38207741	0	+	38176532	38176532	8553170	4	57,135,108,230,	0,472,16155,30979,
#Partially deleted in new
chr8	38176587	38210888	chr8:38176587-38210888	1	+	38176869	38210493	0	4	552,255,255,881,	0,30924,32425,33420,
#Partially deleted in new
chr8	38176598	38213301	chr8:38176598-38213301	3	+	38176869	38210493	0	5	541,108,255,255,3294,	0,16089,30913,32414,33409,
#Partially deleted in new
chr8	38201698	38204238	chr8:38201698-38204238	7	-	38201698	38201698	16724991	4	130,301,93,267,	0,224,1201,2273,
#Partially deleted in new
chr8	38207592	38209557	chr8:38207592-38209557	0	+	38207592	38209306	789624	2	174,545,	0,1420,
#Partially deleted in new
chr8	38231342	38262833	chr8:38231342-38262833	3	+	38232994	38260121	789624	18	517,228,191,90,121,90,136,209,68,123,96,117,156,103,171,163,108,2234,	0,1644,3051,6195,6746,8932,10907,14399,14890,16370,18365,20569,20789,21379,21614,22213,28697,29257,
#Partially deleted in new
chr8	38231483	38234585	chr8:38231483-38234585	0	+	38232994	38234585	789624	3	263,228,192,	0,1503,2910,
#Partially deleted in new
chr8	38231670	38239058	chr8:38231670-38239058	0	+	38231670	38231670	8553170	5	189,228,191,90,970,	0,1316,2723,5867,6418,
#Partially deleted in new
chr8	38231694	38240367	chr8:38231694-38240367	0	+	38232994	38237569	789624	5	165,228,90,121,93,	0,1292,5843,6394,8580,
#Partially deleted in new
chr8	38231714	38237622	chr8:38231714-38237622	0	+	38231714	38231714	8553170	4	145,228,117,85,	0,1272,2679,5823,
#Partially deleted in new
chr8	38231751	38237616	chr8:38231751-38237616	0	+	38232994	38237616	789624	4	108,228,185,79,	0,1235,2648,5786,
#Partially deleted in new
chr8	38231816	38237585	chr8:38231816-38237585	0	+	38234461	38237585	789624	4	43,76,191,48,	0,1322,2577,5721,
#Partially deleted in new
chr8	38231838	38242294	chr8:38231838-38242294	0	+	38232994	38242294	789624	6	21,228,191,90,121,45,	0,1148,2555,5699,6250,10411,
#Partially deleted in new
chr8	38231952	38262769	chr8:38231952-38262769	1	+	38232994	38260121	789624	18	192,228,191,90,121,90,136,209,68,123,96,117,156,103,171,163,108,2170,	0,1034,2441,5585,6136,8322,10297,13789,14280,15760,17755,19959,20179,20769,21004,21603,28087,28647,
#Partially deleted in new
chr8	38232998	38247836	chr8:38232998-38247836	0	+	38233084	38240292	789624	8	216,191,90,90,136,209,68,124,	0,1395,4539,7276,9251,12743,13234,14714,
#Partially deleted in new
chr8	38240274	38251956	chr8:38240274-38251956	0	+	38240274	38251956	789624	5	90,136,209,68,45,	0,1975,5467,5958,11637,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	38241964	38249747	chr8:38241964-38249747	0	+	38241964	38241964	8553170	5	421,209,68,123,40,	0,3777,4268,5748,7743,
#Partially deleted in new
chr8	38242227	38246157	chr8:38242227-38246157	0	+	38242227	38242227	8553170	2	158,416,	0,3514,
#Partially deleted in new
chr8	38246183	38253074	chr8:38246183-38253074	0	+	38246183	38246183	8553170	7	117,123,96,117,156,103,118,	0,1529,3524,5728,5948,6538,6773,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	38246803	38262766	chr8:38246803-38262766	1	+	38247730	38260121	789624	9	1032,96,117,156,103,171,163,108,2167,	0,2904,5108,5328,5918,6153,6752,13236,13796,
#Partially deleted in new
chr8	38249774	38260717	chr8:38249774-38260717	1	+	38252751	38260121	789624	8	29,117,156,83,171,163,108,118,	0,2137,2357,2967,3182,3781,10265,10825,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	38249778	38260813	chr8:38249778-38260813	0	+	38249778	38249778	8553170	7	2250,156,103,171,163,108,214,	0,2353,2943,3178,3777,10261,10821,
#Partially deleted in new
chr8	38252097	38252797	chr8:38252097-38252797	0	+	38252097	38252097	8553170	2	190,76,	0,624,
#Partially deleted in new
chr8	38252165	38260254	chr8:38252165-38260254	0	+	38252165	38260121	789624	5	122,103,171,163,215,	0,556,791,1390,7874,
#Partially deleted in new
chr8	38252210	38253475	chr8:38252210-38253475	0	+	38252210	38252210	8553170	3	77,103,519,	0,511,746,
#Partially deleted in new
chr8	38253560	38260901	chr8:38253560-38260901	0	+	38253560	38260121	789624	3	158,108,338,	0,6479,7003,
#Partially deleted in new
chr8	38260060	38271393	chr8:38260060-38271393	0	+	38260060	38260060	8553170	2	87,272,	0,11061,
#Partially deleted in new
chr8	38260072	38275558	chr8:38260072-38275558	0	+	38260072	38260072	8553170	4	75,62,73,200,	0,1465,13297,15286,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	38263129	38269220	chr8:38263129-38269220	3	-	38264443	38269199	789624	7	1475,171,125,64,91,109,95,	0,3011,4137,4767,5241,5752,5996,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	38263129	38269140	chr8:38263129-38269140	1	-	38264443	38268941	789624	6	1475,171,125,64,91,259,	0,3011,4137,4767,5241,5752,
#Partially deleted in new
chr8	38263137	38267322	chr8:38263137-38267322	0	-	38263137	38263137	8553170	3	269,171,56,	0,3003,4129,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	38264316	38266459	chr8:38264316-38266459	0	-	38264316	38264316	8553170	2	288,319,	0,1824,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	38264350	38269196	chr8:38264350-38269196	0	-	38264443	38269196	789624	7	254,171,125,64,37,109,71,	0,1790,2916,3546,4020,4531,4775,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	38264397	38269174	chr8:38264397-38269174	1	-	38264443	38267333	789624	7	207,171,125,64,91,168,49,	0,1743,2869,3499,3973,4425,4728,
#Partially deleted in new
chr8	38264432	38269180	chr8:38264432-38269180	0	-	38264443	38269180	789624	7	172,129,125,64,91,109,55,	0,1708,2834,3464,3938,4449,4693,
#Partially deleted in new
chr8	38264542	38269175	chr8:38264542-38269175	0	-	38267936	38269175	789624	6	62,171,125,64,109,50,	0,1598,2724,3354,4339,4583,
#Partially deleted in new
chr8	38264738	38269207	chr8:38264738-38269207	1	-	38264932	38269199	789624	7	211,171,125,64,91,109,82,	0,1402,2528,3158,3632,4143,4387,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	38264738	38265622	chr8:38264738-38265622	0	-	38264738	38264738	8553170	2	335,83,	0,801,
#Deleted in new
chr8	38266979	38269243	chr8:38266979-38269243	1	-	38267198	38269199	789624	5	412,64,91,109,118,	0,917,1391,1902,2146,
#Deleted in new
chr8	38266979	38267736	chr8:38266979-38267736	0	-	38266979	38266979	8553170	2	412,131,	0,626,
#Deleted in new
chr8	38267000	38269230	chr8:38267000-38269230	0	-	38267000	38267000	8553170	3	391,1094,105,	0,896,2125,
#Deleted in new
chr8	38267180	38268939	chr8:38267180-38268939	0	-	38267180	38267180	8553170	3	211,64,117,	0,716,1642,
#Deleted in new
chr8	38268618	38269201	chr8:38268618-38269201	0	-	38268618	38268618	8553170	2	372,120,	0,463,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr8	38269696	38382272	chr8:38269696-38382272	3	-	38275640	38348171	0	24	6186,205,107,142,117,270,113,203,157,147,171,198,127,129,131,46,101,127,516,155,163,72,719,474,	0,6599,8609,9843,11770,18790,19696,20778,26099,29747,34890,35551,44950,45719,46215,49198,51375,57033,59681,61734,67608,68839,77800,112102,
#Partially deleted in new
chr8	38275022	38382245	chr8:38275022-38382245	1	-	38275640	38348171	0	23	860,205,107,142,117,270,113,203,157,171,198,127,129,131,46,101,127,516,155,163,72,719,447,	0,1273,3283,4517,6444,13464,14370,15452,20773,29564,30225,39624,40393,40889,43872,46049,51707,54355,56408,62282,63513,72474,106776,
#Partially deleted in new
chr8	38275489	38280210	chr8:38275489-38280210	0	-	38275489	38275489	8553170	4	393,205,107,671,	0,806,2816,4050,
#Partially deleted in new
chr8	38275542	38381846	chr8:38275542-38381846	1	-	38275640	38348171	0	24	340,205,107,142,84,270,113,203,157,147,171,198,127,129,131,46,101,127,516,155,163,72,719,48,	0,753,2763,3997,5957,12944,13850,14932,20253,23901,29044,29705,39104,39873,40369,43352,45529,51187,53835,55888,61762,62993,71954,106256,
#Deleted in new
chr8	38275887	38276680	chr8:38275887-38276680	3	+	38275887	38275887	8553170	2	36,220,	0,573,
#Partially deleted in new
chr8	38289420	38290748	chr8:38289420-38290748	0	-	38289420	38289420	8553170	2	85,274,	0,1054,
#Partially deleted in new
chr8	38295795	38299794	chr8:38295795-38299794	0	-	38295795	38295795	8553170	2	157,351,	0,3648,
#Partially deleted in new
chr8	38316416	38382272	chr8:38316416-38382272	1	-	38317955	38348171	0	10	1622,46,101,127,516,155,163,72,719,474,	0,2478,4655,10313,12961,15014,20888,22119,31080,65382,
#Deleted in new
chr8	38316854	38319291	chr8:38316854-38319291	0	-	38316854	38316854	8553170	2	1184,397,	0,2040,
#Partially deleted in new
chr8	38319754	38326835	chr8:38319754-38326835	0	-	38321044	38326835	789624	2	1418,106,	0,6975,
#Partially deleted in new
chr8	38335980	38337551	chr8:38335980-38337551	3	+	38335980	38335980	8553170	2	205,229,	0,1342,
#Partially deleted in new
chr8	38337368	38381731	chr8:38337368-38381731	0	-	38337368	38348171	789624	4	99,72,719,142,	0,1167,10128,44221,
#Partially deleted in new
chr8	38348095	38382227	chr8:38348095-38382227	0	-	38348095	38348171	789624	3	120,28,429,	0,15777,33703,
#Partially deleted in new
chr8	38348126	38380821	chr8:38348126-38380821	0	-	38348126	38348171	789624	2	89,212,	0,32483,
#Deleted in new
chr8	38382363	38383461	chr8:38382363-38383461	3	+	38382363	38382363	8553170	1	1098,	0,
#Partially deleted in new
chr8	38386206	38392843	chr8:38386206-38392843	0	+	38387983	38392843	789624	3	174,81,302,	0,1743,6335,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	38386302	38394434	chr8:38386302-38394434	1	+	38387983	38393016	789624	3	266,81,1893,	0,1647,6239,
#Partially deleted in new
chr8	38386440	38408544	chr8:38386440-38408544	1	+	38392635	38408274	789624	10	128,81,383,138,201,120,114,93,102,333,	0,1509,6172,13831,14412,16084,17952,20505,20921,21771,
#Partially deleted in new
chr8	38386475	38408544	chr8:38386475-38408544	1	+	38387983	38408274	789624	11	93,81,454,144,138,201,120,114,93,102,333,	0,1474,6066,7622,13796,14377,16049,17917,20470,20886,21736,
#Partially deleted in new
chr8	38386475	38408274	chr8:38386475-38408274	1	+	38387983	38408274	789624	10	93,81,454,138,201,120,114,93,102,63,	0,1474,6066,13796,14377,16049,17917,20470,20886,21736,
#Partially deleted in new
chr8	38386500	38408488	chr8:38386500-38408488	0	+	38392635	38394191	789624	11	682,81,383,59,138,201,120,114,93,102,277,	0,1449,6112,7682,13771,14352,16024,17892,20445,20861,21711,
#Partially deleted in new
chr8	38386500	38408543	chr8:38386500-38408543	3	+	38392635	38408274	789624	11	68,81,383,144,138,201,120,114,93,102,332,	0,1449,6112,7597,13771,14352,16024,17892,20445,20861,21711,
#Partially deleted in new
chr8	38386501	38409527	chr8:38386501-38409527	0	+	38387983	38394191	789624	11	67,81,454,59,138,201,120,114,93,102,1316,	0,1448,6040,7681,13770,14351,16023,17891,20444,20860,21710,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	38386544	38404833	chr8:38386544-38404833	0	+	38386544	38386544	8553170	8	24,81,383,59,138,201,120,441,	0,1405,6068,7638,13727,14308,15980,17848,
#Partially deleted in new
chr8	38387141	38392921	chr8:38387141-38392921	0	+	38387983	38392921	789624	3	93,81,380,	0,808,5400,
#Partially deleted in new
chr8	38396972	38408544	chr8:38396972-38408544	1	+	38397129	38408274	789624	8	160,138,201,120,114,93,102,333,	0,3299,3880,5552,7420,9973,10389,11239,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr8	38400214	38467707	chr8:38400214-38467707	0	-	38413627	38457446	8553170	22	574,77,202,2911,106,138,71,123,191,111,122,146,197,145,191,124,173,84,267,179,48,36,	0,1345,2679,10679,13703,13937,14344,14564,15655,17091,17655,18013,19324,21582,24294,25907,27706,28137,29467,57141,58632,67457,
#Partially deleted in new
chr8	38400535	38401683	chr8:38400535-38401683	0	-	38400535	38400535	8553170	2	253,124,	0,1024,
#Partially deleted in new
chr8	38400882	38407414	chr8:38400882-38407414	0	+	38400882	38400882	8553170	4	171,120,114,82,	0,1642,3510,6450,
#Partially deleted in new
chr8	38404339	38408499	chr8:38404339-38408499	0	+	38404339	38404339	8553170	4	167,93,102,288,	0,2606,3022,3872,
#Partially deleted in new
chr8	38404412	38408544	chr8:38404412-38408544	0	+	38404412	38408274	789624	3	94,102,333,	0,2949,3799,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	38406486	38408543	chr8:38406486-38408543	0	+	38406486	38406486	8553170	3	552,102,332,	0,875,1725,
#Deleted in new
chr8	38408047	38408742	chr8:38408047-38408742	3	-	38408047	38408047	8553170	1	695,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr8	38411137	38468641	chr8:38411137-38468641	1	-	38413627	38457446	0	18	2667,106,138,71,123,191,111,122,146,203,145,191,124,173,84,267,179,661,	0,2780,3014,3421,3641,4732,6168,6732,7090,8395,10659,13371,14984,16783,17214,18544,46218,56843,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr8	38411137	38467845	chr8:38411137-38467845	1	-	38413627	38461106	0	19	2667,106,138,71,123,191,111,122,146,203,145,191,124,173,84,267,179,160,174,	0,2780,3014,3421,3641,4732,6168,6732,7090,8395,10659,13371,14984,16783,17214,18544,46218,49958,56534,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr8	38411138	38468834	chr8:38411138-38468834	1	-	38421927	38457446	789624	19	2666,106,138,71,123,191,111,122,146,203,145,151,191,124,173,93,267,179,854,	0,2779,3013,3420,3640,4731,6167,6731,7089,8394,10658,11886,13370,14983,16782,17213,18543,46217,56842,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr8	38411138	38468834	chr8:38411138-38468834	3	-	38413627	38457446	0	18	2666,106,138,71,123,191,111,122,146,203,145,191,124,173,90,267,179,854,	0,2779,3013,3420,3640,4731,6167,6731,7089,8394,10658,13370,14983,16782,17207,18543,46217,56842,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr8	38411138	38468834	chr8:38411138-38468834	1	-	38419711	38457446	789624	16	2666,106,138,71,123,191,111,122,146,203,191,124,173,84,179,854,	0,2779,3013,3420,3640,4731,6167,6731,7089,8394,13370,14983,16782,17213,46217,56842,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr8	38411230	38468622	chr8:38411230-38468622	1	-	38413627	38457446	0	18	2574,106,138,71,123,191,111,122,146,197,145,191,124,173,90,267,179,642,	0,2687,2921,3328,3548,4639,6075,6639,6997,8308,10566,13278,14891,16690,17115,18451,46125,56750,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	38412084	38413976	chr8:38412084-38413976	0	-	38412084	38412084	8553170	2	511,59,	0,1833,
#Partially deleted in new
chr8	38412727	38467900	chr8:38412727-38467900	1	-	38413627	38457446	0	18	1077,106,138,71,123,191,111,122,146,203,145,191,124,173,84,267,179,229,	0,1190,1424,1831,2051,3142,4578,5142,5500,6805,9069,11781,13394,15193,15624,16954,44628,54944,
#Partially deleted in new
chr8	38412729	38468616	chr8:38412729-38468616	1	-	38413627	38457446	0	17	1075,106,138,71,123,191,111,122,146,203,145,191,124,173,90,179,636,	0,1188,1422,1829,2049,3140,4576,5140,5498,6803,9067,11779,13392,15191,15616,44626,55251,
#Partially deleted in new
chr8	38412730	38468621	chr8:38412730-38468621	1	-	38413627	38440372	0	19	1074,106,138,71,123,191,111,122,146,197,145,191,124,173,90,267,68,179,641,	0,1187,1421,1828,2048,3139,4575,5139,5497,6808,9066,11778,13391,15190,15615,16951,27575,44625,55250,
#Partially deleted in new
chr8	38412731	38468616	chr8:38412731-38468616	1	-	38413627	38457446	0	17	1073,106,138,71,123,191,111,122,146,203,145,191,124,173,84,179,636,	0,1186,1420,1827,2047,3138,4574,5138,5496,6801,9065,11777,13390,15189,15620,44624,55249,
#Partially deleted in new
chr8	38412847	38430820	chr8:38412847-38430820	0	-	38412847	38412847	8553170	14	957,106,138,71,123,191,111,122,146,203,145,191,124,2900,	0,1070,1304,1711,1931,3022,4458,5022,5380,6685,8949,11661,13274,15073,
#Partially deleted in new
chr8	38412933	38457503	chr8:38412933-38457503	1	-	38413627	38457446	789624	16	871,106,138,71,123,191,111,122,146,203,151,191,124,173,84,148,	0,984,1218,1625,1845,2936,4372,4936,5294,6599,10091,11575,13188,14987,15418,44422,
#Partially deleted in new
chr8	38413465	38415923	chr8:38413465-38415923	0	-	38414015	38415923	789624	6	339,117,138,71,123,54,	0,452,686,1093,1313,2404,
#Partially deleted in new
chr8	38413521	38467724	chr8:38413521-38467724	1	-	38413627	38457446	0	19	283,106,138,71,123,191,111,122,146,203,145,191,124,173,84,267,179,160,53,	0,396,630,1037,1257,2348,3784,4348,4706,6011,8275,10987,12600,14399,14830,16160,43834,47574,54150,
#Partially deleted in new
chr8	38414612	38417514	chr8:38414612-38417514	0	-	38414612	38414612	8553170	4	17,123,191,209,	0,166,1257,2693,
#Partially deleted in new
chr8	38414778	38420344	chr8:38414778-38420344	0	-	38414778	38414778	8553170	6	123,191,111,122,146,806,	0,1091,2527,3091,3449,4760,
#Partially deleted in new
chr8	38415992	38457446	chr8:38415992-38457446	0	-	38429295	38457446	789624	12	68,111,122,146,203,145,191,124,173,90,144,91,	0,1313,1877,2235,3540,5804,8516,10129,11928,12353,13254,41363,
#Partially deleted in new
chr8	38417312	38422044	chr8:38417312-38422044	0	-	38417312	38417312	8553170	5	104,122,146,203,248,	0,557,915,2220,4484,
#Partially deleted in new
chr8	38417406	38420044	chr8:38417406-38420044	0	-	38417406	38417406	8553170	4	10,122,146,512,	0,463,821,2126,
#Partially deleted in new
chr8	38417952	38418674	chr8:38417952-38418674	0	-	38417952	38417952	8553170	2	39,447,	0,275,
#Partially deleted in new
chr8	38421707	38426181	chr8:38421707-38426181	0	-	38421707	38421707	8553170	3	234,191,60,	0,2801,4414,
#Partially deleted in new
chr8	38421842	38457532	chr8:38421842-38457532	0	-	38421842	38421842	8553170	2	99,177,	0,35513,
#Partially deleted in new
chr8	38421888	38426096	chr8:38421888-38426096	3	+	38421888	38421888	8553170	2	387,147,	0,4061,
#Partially deleted in new
chr8	38422743	38424621	chr8:38422743-38424621	0	-	38422743	38422743	8553170	2	432,113,	0,1765,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	38423312	38468308	chr8:38423312-38468308	0	-	38423312	38423312	8553170	6	1387,124,173,90,179,328,	0,2809,4608,5033,34043,44668,
#Partially deleted in new
chr8	38424016	38468635	chr8:38424016-38468635	0	-	38424016	38424016	8553170	6	683,124,173,84,179,655,	0,2105,3904,4335,33339,43964,
#Partially deleted in new
chr8	38424527	38457476	chr8:38424527-38457476	0	-	38424527	38424527	8553170	4	172,173,90,121,	0,3393,3818,32828,
#Partially deleted in new
chr8	38424545	38467707	chr8:38424545-38467707	0	-	38424545	38428061	789624	5	154,124,173,84,36,	0,1576,3375,3806,43126,
#Partially deleted in new
chr8	38424548	38467842	chr8:38424548-38467842	0	-	38424548	38457446	789624	7	151,124,173,90,267,179,171,	0,1573,3372,3797,5133,32807,43123,
#Partially deleted in new
chr8	38424682	38430002	chr8:38424682-38430002	0	-	38424682	38424682	8553170	5	17,124,173,90,321,	0,1439,3238,3663,4999,
#Partially deleted in new
chr8	38426126	38429811	chr8:38426126-38429811	0	-	38426126	38426126	8553170	3	119,515,130,	0,1794,3555,
#Partially deleted in new
chr8	38426157	38467804	chr8:38426157-38467804	0	-	38426157	38457446	789624	5	88,173,84,179,133,	0,1763,2194,31198,41514,
#Partially deleted in new
chr8	38426173	38467845	chr8:38426173-38467845	0	-	38426173	38457446	789624	5	72,173,90,179,174,	0,1747,2172,31182,41498,
#Partially deleted in new
chr8	38426178	38457446	chr8:38426178-38457446	0	-	38429295	38457446	0	6	67,173,84,144,267,91,	0,1742,2173,3068,3503,31177,
#Partially deleted in new
chr8	38428011	38466663	chr8:38428011-38466663	0	-	38428011	38457446	789624	4	82,84,179,122,	0,340,29344,38530,
#Partially deleted in new
chr8	38428362	38466695	chr8:38428362-38466695	0	-	38428362	38457446	789624	4	73,179,123,154,	0,28993,30484,38179,
#Partially deleted in new
chr8	38429520	38468150	chr8:38429520-38468150	0	-	38429520	38429520	8553170	3	428,179,170,	0,27835,38460,
#Partially deleted in new
chr8	38429719	38467712	chr8:38429719-38467712	0	-	38429719	38457446	789624	4	229,179,138,41,	0,27636,29127,37952,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	38434346	38435664	chr8:38434346-38435664	7	-	38434346	38434346	16724991	1	1318,	0,
#Deleted in new
chr8	38434386	38434743	chr8:38434386-38434743	5	-	38434386	38434386	16724991	1	357,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	38457441	38463400	chr8:38457441-38463400	0	-	38457441	38457446	8553170	2	93,296,	0,5663,
#Deleted in new
chr8	38465412	38466663	chr8:38465412-38466663	0	-	38465412	38465412	8553170	2	462,122,	0,1129,
#Deleted in new
chr8	38465513	38466196	chr8:38465513-38466196	0	-	38465513	38465513	8553170	2	361,81,	0,602,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	38510833	38528662	chr8:38510833-38528662	3	-	38512386	38528637	789624	3	1806,104,340,	0,5575,17489,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	38510833	38529044	chr8:38510833-38529044	0	-	38510833	38510833	8553170	3	1806,104,722,	0,5575,17489,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	38511378	38528657	chr8:38511378-38528657	1	-	38512462	38528637	789624	2	1192,335,	0,16944,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	38511378	38528657	chr8:38511378-38528657	0	-	38511378	38511378	8553170	2	1192,335,	0,16944,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	38511666	38560939	chr8:38511666-38560939	0	-	38511666	38511666	8553170	4	973,104,90,40,	0,4742,19085,49233,
#Partially deleted in new
chr8	38543651	38552680	chr8:38543651-38552680	0	-	38543651	38543651	8553170	3	195,124,60,	0,7803,8969,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	38543651	38553791	chr8:38543651-38553791	3	-	38543651	38543651	8553170	4	195,96,173,1171,	0,432,7803,8969,
#Partially deleted in new
chr8	38552247	38559020	chr8:38552247-38559020	1	-	38552247	38552247	8553170	5	133,133,153,67,51,	0,711,1468,2641,6722,
#Partially deleted in new
chr8	38552249	38560877	chr8:38552249-38560877	0	-	38552249	38552249	8553170	3	131,471,182,	0,371,8446,
#Deleted in new
chr8	38600660	38601200	chr8:38600660-38601200	7	-	38600660	38600660	16724991	1	540,	0,
#Partially deleted in new
chr8	38700625	38704855	chr8:38700625-38704855	3	-	38700625	38700625	8553170	4	256,154,80,245,	0,328,911,3985,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr8	38728185	38850793	chr8:38728185-38850793	1	+	38819829	38848023	789624	13	486,116,1114,58,208,53,126,77,44,161,107,121,2839,	0,60518,91336,97125,98982,102939,107976,110284,112038,114101,115103,118513,119769,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr8	38728189	38850793	chr8:38728189-38850793	1	+	38819829	38848023	789624	13	482,116,1114,61,208,53,126,77,44,161,107,121,2839,	0,60514,91332,97118,98978,102935,107972,110280,112034,114097,115099,118509,119765,
#Partially deleted in new
chr8	38728587	38839449	chr8:38728587-38839449	1	+	38742398	38839348	789624	10	84,101,116,1114,61,121,53,126,77,123,	0,13763,60116,90934,96720,98580,102537,107574,109882,110739,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	38728616	38745352	chr8:38728616-38745352	0	+	38728616	38728616	8553170	2	114,458,	0,16278,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr8	38728639	38848132	chr8:38728639-38848132	1	+	38745467	38848023	789624	15	32,101,599,116,1114,61,121,53,126,77,44,161,107,121,178,	0,13711,16255,60064,90882,96668,98528,102485,107522,109830,111584,113647,114649,118059,119315,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	38744019	38744131	chr8:38744019-38744131	3	+	38744019	38744019	8553170	1	112,	0,
#Partially deleted in new
chr8	38757238	38831177	chr8:38757238-38831177	0	+	38757332	38831177	789624	4	171,61,208,53,	0,68069,69929,73886,
#Partially deleted in new
chr8	38757276	38831177	chr8:38757276-38831177	0	+	38757332	38831177	789624	5	133,36,61,208,53,	0,66713,68031,69891,73848,
#Partially deleted in new
chr8	38757280	38836291	chr8:38757280-38836291	0	+	38757332	38836291	789624	7	129,116,1114,61,121,53,130,	0,31423,62241,68027,69887,73844,78881,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	38757298	38840618	chr8:38757298-38840618	0	+	38757298	38757298	8553170	7	111,61,121,53,126,77,395,	0,68009,69869,73826,78863,81171,82925,
#Partially deleted in new
chr8	38785673	38819714	chr8:38785673-38819714	0	+	38785673	38785673	8553170	3	63,116,193,	0,3030,33848,
#Partially deleted in new
chr8	38785673	38819631	chr8:38785673-38819631	0	+	38787582	38819631	789624	4	63,187,116,110,	0,1883,3030,33848,
#Partially deleted in new
chr8	38785910	38838507	chr8:38785910-38838507	0	+	38785910	38785910	8553170	6	33,61,208,53,126,38,	0,39397,41257,45214,50251,52559,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr8	38787203	38853028	chr8:38787203-38853028	1	+	38787582	38848023	789624	13	540,116,1114,61,208,53,126,77,44,161,107,121,5074,	0,1500,32318,38104,39964,43921,48958,51266,53020,55083,56085,59495,60751,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr8	38787262	38853028	chr8:38787262-38853028	3	+	38787582	38848023	789624	11	481,61,208,53,126,77,44,161,107,121,5074,	0,38045,39905,43862,48899,51207,52961,55024,56026,59436,60692,
#Partially deleted in new
chr8	38788105	38848276	chr8:38788105-38848276	1	+	38819829	38848023	789624	13	141,116,1114,61,121,53,126,77,44,161,107,121,322,	0,598,31416,37202,39062,43019,48056,50364,52118,54181,55183,58593,59849,
#Partially deleted in new
chr8	38788105	38819920	chr8:38788105-38819920	0	+	38819829	38819920	789624	3	141,116,399,	0,598,31416,
#Partially deleted in new
chr8	38788162	38820243	chr8:38788162-38820243	0	+	38819829	38820243	789624	3	129,116,722,	0,541,31359,
#Partially deleted in new
chr8	38788321	38819750	chr8:38788321-38819750	0	+	38788321	38788321	8553170	3	244,116,229,	0,382,31200,
#Partially deleted in new
chr8	38788360	38819622	chr8:38788360-38819622	0	+	38788360	38788360	8553170	2	459,101,	0,31161,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	38799642	38802296	chr8:38799642-38802296	3	+	38799642	38799642	8553170	2	247,109,	0,2545,
#Partially deleted in new
chr8	38805449	38820011	chr8:38805449-38820011	0	+	38819829	38820011	789624	2	195,490,	0,14072,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	38805451	38828067	chr8:38805451-38828067	0	+	38805451	38805451	8553170	4	193,1114,61,900,	0,14070,19856,21716,
#Partially deleted in new
chr8	38819920	38848142	chr8:38819920-38848142	0	+	38819920	38848023	789624	12	715,36,61,121,53,126,77,44,158,107,121,188,	0,4069,5387,7247,11204,16241,18549,20303,22369,23368,26778,28034,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	38820331	38850775	chr8:38820331-38850775	0	+	38820331	38848023	789624	12	304,36,61,208,53,126,77,44,158,107,121,2821,	0,3658,4976,6836,10793,15830,18138,19892,21958,22957,26367,27623,
#Partially deleted in new
chr8	38820546	38848521	chr8:38820546-38848521	1	+	38831150	38848023	789624	10	89,208,53,126,77,44,158,107,121,567,	0,6621,10578,15615,17923,19677,21743,22742,26152,27408,
#Partially deleted in new
chr8	38824651	38827288	chr8:38824651-38827288	0	+	38824651	38824651	8553170	3	111,61,121,	0,656,2516,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	38839283	38853028	chr8:38839283-38853028	0	+	38839283	38839283	8553170	5	984,161,107,121,5074,	0,3003,4005,7415,8671,
#Partially deleted in new
chr8	38840050	38843563	chr8:38840050-38843563	0	+	38840050	38840050	8553170	3	217,161,275,	0,2236,3238,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	38844865	38846439	chr8:38844865-38846439	3	-	38844865	38844865	8553170	2	105,282,	0,1292,
#Partially deleted in new
chr8	38846468	38848282	chr8:38846468-38848282	0	+	38846468	38846468	8553170	2	351,328,	0,1486,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	38901234	38971779	chr8:38901234-38971779	1	+	38917929	38970636	789624	9	211,164,57,49,98,141,147,69,1191,	0,16672,34759,42554,44889,49615,50931,51401,69354,
#Partially deleted in new
chr8	38901278	38970227	chr8:38901278-38970227	1	+	38936002	38969783	789624	11	167,57,49,98,141,147,69,71,64,78,807,	0,34715,42510,44845,49571,50887,51357,52018,56044,67313,68142,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	38901290	38973909	chr8:38901290-38973909	3	+	38917929	38969783	789624	12	155,164,57,49,98,141,147,69,71,64,78,4489,	0,16616,34703,42498,44833,49559,50875,51345,52006,56032,67301,68130,
#Partially deleted in new
chr8	38901343	38946221	chr8:38901343-38946221	0	+	38917929	38946221	789624	6	102,95,164,57,49,98,	0,454,16563,34650,42445,44780,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	38901802	38971956	chr8:38901802-38971956	1	+	38917929	38969783	789624	10	267,164,57,141,147,69,71,64,78,2536,	0,16104,34191,49047,50363,50833,51494,55520,66789,67618,
#Partially deleted in new
chr8	38950552	38952316	chr8:38950552-38952316	0	+	38950552	38950552	8553170	2	438,151,	0,1613,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	38952265	38960913	chr8:38952265-38960913	0	+	38952265	38952265	8553170	5	47,69,71,64,87,	0,370,1031,5057,8561,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	38968966	38971347	chr8:38968966-38971347	0	+	38968966	38968966	8553170	2	27,642,	0,1739,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	38970359	38973011	chr8:38970359-38973011	3	-	38970359	38970359	8553170	2	72,578,	0,2074,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	38971615	38972562	chr8:38971615-38972562	0	+	38971615	38971615	8553170	2	235,331,	0,616,
#Partially deleted in new
chr8	38974163	38988662	chr8:38974163-38988662	3	+	38974263	38988098	789624	9	566,100,205,195,33,115,58,96,727,	0,867,2371,3789,5051,7489,8334,8789,13772,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	38988807	38996533	chr8:38988807-38996533	3	-	38991331	38996439	789624	4	2738,116,88,321,	0,4737,6510,7405,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	38988807	38996483	chr8:38988807-38996483	1	-	38991331	38995503	789624	4	2738,116,376,65,	0,4737,6510,7611,
#Partially deleted in new
chr8	38990804	38996509	chr8:38990804-38996509	1	-	38991331	38995503	789624	4	741,116,477,297,	0,2740,4513,5408,
#Partially deleted in new
chr8	38991371	38996509	chr8:38991371-38996509	0	-	38991371	38991371	8553170	4	174,116,88,91,	0,2173,3946,5047,
#Partially deleted in new
chr8	38991485	38996824	chr8:38991485-38996824	0	-	38991485	38995503	789624	4	60,116,477,232,	0,2059,3832,5107,
#Partially deleted in new
chr8	38991491	38995624	chr8:38991491-38995624	0	-	38991491	38991491	8553170	4	54,116,88,26,	0,2053,3826,4107,
#Partially deleted in new
chr8	38991493	38994036	chr8:38991493-38994036	0	-	38991493	38991493	8553170	2	52,492,	0,2051,
#Deleted in new
chr8	38995118	38996498	chr8:38995118-38996498	0	-	38995118	38995118	8553170	2	287,286,	0,1094,
#Deleted in new
chr8	38995315	38996509	chr8:38995315-38996509	0	-	38995315	38995503	789624	2	479,91,	0,1103,
#Deleted in new
chr8	38995368	38996816	chr8:38995368-38996816	0	-	38995368	38995503	789624	2	325,224,	0,1224,
#Partially deleted in new
chr8	38996868	39016016	chr8:38996868-39016016	1	+	38997063	39014602	789624	5	292,98,59,79,1525,	0,11017,14789,17096,17623,
#Partially deleted in new
chr8	38996985	39016019	chr8:38996985-39016019	1	+	38997063	39014097	789624	4	175,98,59,2055,	0,10900,14672,16979,
#Partially deleted in new
chr8	38996985	39105001	chr8:38996985-39105001	3	+	38997063	39103700	0	22	175,98,59,79,77,196,66,72,170,82,134,172,93,196,106,184,81,106,142,88,68,1395,	0,10900,14672,16979,19132,20233,21867,24657,26170,28817,29691,44960,57495,58591,74312,80242,85655,85982,93061,94273,104877,106621,
#Partially deleted in new
chr8	38997025	39105144	chr8:38997025-39105144	0	+	38997063	39090052	0	21	135,98,59,79,77,196,66,72,170,82,134,172,93,196,106,184,81,142,88,68,1538,	0,10860,14632,16939,19092,20193,21827,24617,26130,28777,29651,44920,57455,58551,74272,80202,85615,93021,94233,104837,106581,
#Partially deleted in new
chr8	38997025	39105144	chr8:38997025-39105144	0	+	38997063	39090052	789624	20	135,98,59,79,77,196,66,72,170,82,134,172,93,196,106,184,142,88,68,1538,	0,10860,14632,16939,19092,20193,21827,24617,26130,28777,29651,44920,57455,58551,74272,80202,93021,94233,104837,106581,
#Partially deleted in new
chr8	38997025	39105137	chr8:38997025-39105137	0	+	38997063	39091329	789624	21	135,98,59,79,77,196,66,72,170,82,134,172,93,196,106,184,81,106,88,68,1531,	0,10860,14632,16939,19092,20193,21827,24617,26130,28777,29651,44920,57455,58551,74272,80202,85615,85942,94233,104837,106581,
#Partially deleted in new
chr8	39017035	39021713	chr8:39017035-39021713	0	+	39017035	39017035	8553170	3	379,66,71,	0,1817,4607,
#Deleted in new
chr8	39018614	39018683	chr8:39018614-39018683	3	-	39018614	39018614	789624	1	69,	0,
#Partially deleted in new
chr8	39075887	39082726	chr8:39075887-39082726	0	+	39075887	39075887	8553170	3	388,184,86,	0,1340,6753,
#Partially deleted in new
chr8	39089784	39103629	chr8:39089784-39103629	0	+	39089784	39089784	8553170	4	404,88,68,23,	0,1474,12078,13822,
#Partially deleted in new
chr8	39106989	39151448	chr8:39106989-39151448	0	+	39107048	39151448	789624	6	210,80,62,76,77,72,	0,11096,29667,40140,42801,44387,
#Partially deleted in new
chr8	39107528	39160959	chr8:39107528-39160959	0	+	39107775	39160959	789624	7	305,80,62,76,77,49,63,	0,10557,29128,39601,42262,43971,53368,
#Partially deleted in new
chr8	39107570	39284909	chr8:39107570-39284909	1	+	39107674	39284799	789624	22	263,62,76,77,172,69,72,167,82,93,199,109,184,84,103,157,39,39,39,39,39,117,	0,29086,39559,42220,43806,53326,57193,57459,62345,114039,115469,124456,126328,138512,146843,149616,163305,166741,168257,173565,176015,177222,
#Partially deleted in new
chr8	39107607	39284909	chr8:39107607-39284909	1	+	39107775	39284799	789624	19	226,80,62,76,77,172,69,72,167,82,93,199,109,184,84,103,157,39,117,	0,10478,29049,39522,42183,43769,53289,57156,57422,62308,114002,115432,124419,126291,138475,146806,149579,175978,177185,
#Partially deleted in new
chr8	39107648	39284909	chr8:39107648-39284909	3	+	39107775	39284799	789624	25	185,80,62,76,77,172,69,72,167,82,137,181,93,199,109,184,84,103,157,39,39,39,39,39,117,	0,10437,29008,39481,42142,43728,53248,57115,57381,62267,79260,103495,113961,115391,124378,126250,138434,146765,149538,163227,166663,168179,173487,175937,177144,
#Partially deleted in new
chr8	39107772	39164792	chr8:39107772-39164792	0	+	39107775	39164792	789624	7	61,80,62,76,77,172,29,	0,10313,28884,39357,42018,43604,56991,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	39107955	39151406	chr8:39107955-39151406	0	+	39147151	39151406	789624	6	246,80,62,76,77,30,	0,10130,28701,39174,41835,43421,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr8	39118121	39224155	chr8:39118121-39224155	0	+	39118121	39118121	8553170	11	44,122,62,76,77,172,69,72,4968,93,1116,	0,11854,18535,29008,31669,33255,42775,46642,46908,103488,104918,
#Deleted in new
chr8	39157537	39158701	chr8:39157537-39158701	7	-	39157537	39157537	16724991	1	1164,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	39220934	39284909	chr8:39220934-39284909	0	+	39220934	39220934	8553170	7	768,199,84,103,157,39,117,	0,2105,25148,33479,36252,62651,63858,
#Partially deleted in new
chr8	39270874	39284911	chr8:39270874-39284911	0	+	39270874	39270874	8553170	5	40,39,39,39,119,	0,3437,4953,12711,13918,
#Partially deleted in new
chr8	39270875	39276297	chr8:39270875-39276297	0	+	39270875	39270875	8553170	3	39,39,470,	0,3436,4952,
#Partially deleted in new
chr8	39309908	39310443	chr8:39309908-39310443	7	-	39309908	39309908	16724991	1	535,	0,
#Partially deleted in new
chr8	39314590	39417378	chr8:39314590-39417378	7	+	39314590	39314590	16724991	16	127,80,54,79,77,172,66,184,199,91,232,87,115,163,51,165,	0,864,4861,7970,8379,9577,10622,31270,61088,66198,66913,77983,78681,86742,88215,102623,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr8	39314603	39417378	chr8:39314603-39417378	5	+	39314603	39314603	16724991	16	114,80,79,77,172,66,123,184,199,91,232,87,115,163,51,165,	0,851,7957,8366,9564,10609,29460,31257,61075,66185,66900,77970,78668,86729,88202,102610,
#Partially deleted in new
chr8	39314631	39417378	chr8:39314631-39417378	5	+	39314631	39314631	16724991	14	86,80,79,77,172,66,199,91,232,87,115,163,51,165,	0,823,7929,8338,9536,10581,61047,66157,66872,77942,78640,86701,88174,102582,
#Partially deleted in new
chr8	39314631	39323739	chr8:39314631-39323739	4	+	39314631	39314631	16724991	5	86,80,54,79,770,	0,823,4820,7929,8338,
#Partially deleted in new
chr8	39314662	39417226	chr8:39314662-39417226	4	+	39314662	39314662	16724991	14	55,80,54,79,77,172,199,91,232,87,115,163,51,13,	0,792,4789,7898,8307,9505,61016,66126,66841,77911,78609,86670,88143,102551,
#Partially deleted in new
chr8	39314662	39417226	chr8:39314662-39417226	4	+	39314662	39314662	16724991	15	55,80,54,79,77,172,66,199,91,232,87,115,163,51,13,	0,792,4789,7898,8307,9505,10550,61016,66126,66841,77911,78609,86670,88143,102551,
#Partially deleted in new
chr8	39314662	39324235	chr8:39314662-39324235	4	+	39314662	39314662	16724991	4	55,79,77,68,	0,7898,8307,9505,
#Partially deleted in new
chr8	39314662	39417226	chr8:39314662-39417226	4	+	39314662	39314662	16724991	15	55,80,54,79,77,172,184,199,91,232,87,115,163,51,13,	0,792,4789,7898,8307,9505,31198,61016,66126,66841,77911,78609,86670,88143,102551,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	39315486	39335489	chr8:39315486-39335489	4	+	39315486	39315486	16724991	6	48,54,79,77,172,90,	0,3965,7074,7483,8681,19913,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	39322560	39335493	chr8:39322560-39335493	4	+	39322560	39322560	16724991	5	79,77,172,66,94,	0,409,1607,2652,12839,
#Partially deleted in new
chr8	39381516	39417226	chr8:39381516-39417226	4	+	39381516	39381516	16724991	5	219,115,163,51,13,	0,11755,19816,21289,35697,
#Partially deleted in new
chr8	39381516	39417226	chr8:39381516-39417226	4	+	39381516	39381516	16724991	4	219,87,115,13,	0,11057,11755,35697,
#Partially deleted in new
chr8	39451044	39522848	chr8:39451044-39522848	5	-	39451044	39451044	16724991	20	117,51,166,115,78,181,88,196,99,184,137,82,167,72,66,178,77,79,55,96,	0,3005,4294,14800,16578,22437,22888,23465,24378,40780,42066,48289,49447,49870,52929,54296,54751,61533,63056,71708,
#Partially deleted in new
chr8	39451044	39522848	chr8:39451044-39522848	7	-	39451044	39451044	16724991	14	117,51,57,11,137,82,167,72,66,178,77,79,55,96,	0,3005,4294,40953,42066,48289,49447,49870,52929,54296,54751,61533,63056,71708,
#Partially deleted in new
chr8	39451047	39522825	chr8:39451047-39522825	4	-	39451047	39451047	16724991	21	114,51,166,115,78,181,88,196,99,184,137,82,167,72,66,178,77,79,55,83,73,	0,3002,4291,14797,16575,22434,22885,23462,24375,40777,42063,48286,49444,49867,52926,54293,54748,61530,63053,71212,71705,
#Partially deleted in new
chr8	39455338	39522810	chr8:39455338-39522810	5	-	39455338	39455338	16724991	19	166,111,78,181,88,196,99,184,137,82,167,72,66,178,77,79,55,83,58,	0,10510,12284,18143,18594,19171,20084,36486,37772,43995,45153,45576,48635,50002,50457,57239,58762,66921,67414,
#Partially deleted in new
chr8	39474639	39522852	chr8:39474639-39522852	5	-	39474639	39474639	16724991	10	66,99,184,137,82,167,77,79,55,100,	0,783,17185,18471,24694,25852,31156,37938,39461,48113,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	39488886	39522812	chr8:39488886-39522812	4	-	39488886	39488886	16724991	9	285,95,184,137,82,167,77,55,60,	0,1376,2938,4224,10447,11605,16909,25214,33866,
#Partially deleted in new
chr8	39522975	39580134	chr8:39522975-39580134	5	+	39522975	39522975	16724991	12	58,66,72,137,139,188,187,87,112,165,58,170,	0,8629,13233,28922,33335,35016,35370,40064,43730,50268,52605,56989,
#Partially deleted in new
chr8	39536208	39558532	chr8:39536208-39558532	5	+	39536208	39536208	16724991	6	72,167,137,193,66,182,	0,305,15689,21094,21783,22142,
#Partially deleted in new
chr8	39556145	39558533	chr8:39556145-39558533	6	+	39556145	39556145	16724991	3	304,188,188,	0,1846,2200,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	39575593	39580134	chr8:39575593-39580134	5	+	39575593	39575593	16724991	3	45,58,170,	0,2820,4371,
#Partially deleted in new
chr8	39584488	39610744	chr8:39584488-39610744	0	+	39584622	39606329	789624	7	189,77,34,56,79,77,216,	0,787,21239,21818,24553,24996,26040,
#Partially deleted in new
chr8	39584577	39730063	chr8:39584577-39730063	3	+	39584622	39729940	789624	20	100,77,56,79,77,178,66,72,167,82,137,184,96,199,106,190,81,115,160,166,	0,698,21729,24464,24907,25951,44796,52686,52959,53887,60760,63766,79217,83420,92853,95459,108022,122212,139170,145320,
#Partially deleted in new
chr8	39584580	39730064	chr8:39584580-39730064	1	+	39584622	39729940	789624	19	97,77,56,79,77,178,66,167,82,137,184,96,199,106,190,81,115,160,167,	0,695,21726,24461,24904,25948,44793,52956,53884,60757,63763,79214,83417,92850,95456,108019,122209,139167,145317,
#Partially deleted in new
chr8	39584584	39611575	chr8:39584584-39611575	1	+	39584622	39610733	789624	6	93,77,56,79,77,1047,	0,691,21722,24457,24900,25944,
#Partially deleted in new
chr8	39584622	39729968	chr8:39584622-39729968	0	+	39584622	39629377	789624	18	55,77,56,79,77,66,72,167,82,137,96,199,106,190,81,115,160,71,	0,653,21684,24419,24862,44751,52641,52914,53842,60715,79172,83375,92808,95414,107977,122167,139125,145275,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	39604626	39610744	chr8:39604626-39610744	0	+	39604626	39604626	8553170	5	110,56,79,77,216,	0,1680,4415,4858,5902,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	39685129	39730062	chr8:39685129-39730062	0	+	39685129	39685129	8553170	5	283,81,115,160,165,	0,7470,21660,38618,44768,
#Partially deleted in new
chr8	39685173	39723958	chr8:39685173-39723958	0	+	39685173	39685173	8553170	4	239,81,115,211,	0,7426,21616,38574,
#Partially deleted in new
chr8	39743734	39838289	chr8:39743734-39838289	3	-	39744859	39838185	789624	21	330,64,160,139,78,184,106,196,99,184,137,82,167,72,57,169,77,79,56,77,159,	0,1095,2737,5577,5932,11993,17441,23113,23418,25657,33290,43239,44350,44934,65675,77267,77851,81084,90209,93401,94396,
#Partially deleted in new
chr8	39743734	39838209	chr8:39743734-39838209	1	-	39744859	39838185	789624	20	330,64,160,139,78,184,106,196,99,184,137,82,167,72,169,77,79,56,77,79,	0,1095,2737,5577,5932,11993,17441,23113,23418,25657,33290,43239,44350,44934,77267,77851,81084,90209,93401,94396,
#Partially deleted in new
chr8	39743734	39838210	chr8:39743734-39838210	1	-	39744859	39838185	789624	17	330,64,160,139,78,94,106,196,99,184,137,169,77,79,56,77,80,	0,1095,2737,5577,5932,11993,17441,23113,23418,25657,33290,77267,77851,81084,90209,93401,94396,
#Partially deleted in new
chr8	39743737	39838289	chr8:39743737-39838289	1	-	39744859	39838185	789624	20	327,64,160,139,77,102,196,99,184,137,82,167,72,57,169,77,79,56,77,159,	0,1092,2734,5574,5929,17442,23110,23415,25654,33287,43236,44347,44931,65672,77264,77848,81081,90206,93398,94393,
#Partially deleted in new
chr8	39744030	39838227	chr8:39744030-39838227	1	-	39744859	39838185	789624	20	34,64,160,139,78,101,196,99,184,137,82,167,72,57,169,77,79,56,77,97,	0,799,2441,5281,5636,17150,22817,23122,25361,32994,42943,44054,44638,65379,76971,77555,80788,89913,93105,94100,
#Partially deleted in new
chr8	39766848	39774702	chr8:39766848-39774702	0	-	39766848	39766848	8553170	4	195,99,184,42,	0,304,2543,7812,
#Partially deleted in new
chr8	39817901	39838209	chr8:39817901-39838209	0	-	39817901	39817901	8553170	7	191,169,77,79,56,77,79,	0,3100,3684,6917,16042,19234,20229,
#Deleted in new
chr8	39860218	39860525	chr8:39860218-39860525	7	+	39860218	39860218	16724991	1	307,	0,
#Deleted in new
chr8	39867435	39867812	chr8:39867435-39867812	7	-	39867435	39867435	16724991	2	128,58,	0,319,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	39903774	39995248	chr8:39903774-39995248	3	-	39903774	39903774	8553170	3	247,121,134,	0,83603,91340,
#Partially deleted in new
chr8	39913283	39928431	chr8:39913283-39928431	1	+	39913922	39928185	0	10	726,96,120,119,15,100,118,52,149,602,	0,4591,4804,5531,6816,9268,10185,11437,11939,14546,
#Partially deleted in new
chr8	39913868	39928444	chr8:39913868-39928444	0	+	39913922	39922631	789624	9	141,96,120,130,100,122,52,149,615,	0,4006,4219,4946,8683,9600,10852,11354,13961,
#Partially deleted in new
chr8	39914228	39915721	chr8:39914228-39915721	3	+	39914228	39914228	8553170	2	17,85,	0,1408,
#Partially deleted in new
chr8	39917884	39922911	chr8:39917884-39922911	0	+	39917884	39917884	8553170	5	86,120,119,15,360,	0,203,930,2215,4667,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	39918075	39920890	chr8:39918075-39920890	3	-	39918075	39918075	8553170	2	349,256,	0,2559,
#Partially deleted in new
chr8	39922551	39923931	chr8:39922551-39923931	0	+	39922551	39922551	8553170	2	100,463,	0,917,
#Partially deleted in new
chr8	39924719	39928138	chr8:39924719-39928138	0	+	39924719	39924719	8553170	3	53,149,309,	0,503,3110,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr8	39934613	40016391	chr8:39934613-40016391	0	+	39934613	39934613	8553170	11	605,116,96,120,119,1510,186,100,118,149,1145,	0,14535,28994,44453,48038,50337,52286,53257,55107,78951,80633,
#Partially deleted in new
chr8	39934954	40016391	chr8:39934954-40016391	3	+	39935196	40015602	789624	11	264,116,96,120,119,15,100,118,52,149,1145,	0,14194,28653,44112,47697,50553,52916,54766,70372,78610,80292,
#Partially deleted in new
chr8	39949165	40015605	chr8:39949165-40015605	1	+	39949165	40015602	789624	10	99,96,120,119,15,100,118,52,149,359,	0,14442,29901,33486,36342,38705,40555,56161,64399,66081,
#Partially deleted in new
chr8	39987742	40016391	chr8:39987742-40016391	0	+	39987742	39987742	8553170	4	228,118,149,1145,	0,1978,25822,27504,
#Deleted in new
chr8	39997868	39998499	chr8:39997868-39998499	7	-	39997868	39997868	16724991	1	631,	0,
#Partially deleted in new
chr8	40104168	40107935	chr8:40104168-40107935	3	+	40104168	40104168	8553170	2	134,53,	0,3714,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	40114650	40127468	chr8:40114650-40127468	3	+	40114650	40114650	8553170	3	223,128,388,	0,10875,12430,
#Deleted in new
chr8	40153454	40155308	chr8:40153454-40155308	3	+	40153532	40153853	789624	1	1854,	0,
#Partially deleted in new
chr8	40161457	40172612	chr8:40161457-40172612	3	+	40161457	40161457	8553170	4	102,40,77,312,	0,1249,10259,10843,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	40298740	40311261	chr8:40298740-40311261	3	-	40298740	40298740	8553170	3	714,97,70,	0,5946,12451,
#Partially deleted in new
chr8	40299074	40343402	chr8:40299074-40343402	0	-	40299074	40299074	8553170	2	380,125,	0,44203,
#Partially deleted in new
chr8	40333172	40343363	chr8:40333172-40343363	1	-	40333172	40333172	8553170	3	497,80,86,	0,701,10105,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	40370027	40401848	chr8:40370027-40401848	3	+	40370027	40370027	8553170	4	69,165,59,180,	0,728,30987,31641,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	40519564	40520158	chr8:40519564-40520158	3	-	40519564	40519564	8553170	1	594,	0,
#Partially deleted in new
chr8	40530589	40897833	chr8:40530589-40897833	1	-	40532222	40825676	789624	6	1649,97,157,90,106,151,	0,50575,166655,237051,294985,367093,
#Partially deleted in new
chr8	40530593	40897825	chr8:40530593-40897825	3	-	40532222	40825676	789624	7	1645,97,228,157,90,106,143,	0,50571,144110,166651,237047,294981,367089,
#Partially deleted in new
chr8	40581203	40888545	chr8:40581203-40888545	0	-	40581203	40825676	789624	6	58,228,157,90,106,51,	0,93500,116041,186437,244371,307291,
#Partially deleted in new
chr8	40674363	40697337	chr8:40674363-40697337	0	-	40674363	40674363	8553170	2	568,93,	0,22881,
#Partially deleted in new
chr8	40696995	40786782	chr8:40696995-40786782	0	-	40696995	40696995	8553170	3	406,90,94,	0,70645,89693,
#Partially deleted in new
chr8	40697269	40897824	chr8:40697269-40897824	0	-	40786698	40825676	789624	5	132,90,94,106,142,	0,70371,89419,128305,200413,
#Partially deleted in new
chr8	40697273	40897810	chr8:40697273-40897810	0	-	40808532	40825676	789624	5	128,90,63,106,128,	0,70367,111235,128301,200409,
#Partially deleted in new
chr8	40767645	40897807	chr8:40767645-40897807	0	-	40808532	40825676	789624	5	85,94,63,106,125,	0,19043,40863,57929,130037,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	40808522	40884944	chr8:40808522-40884944	0	-	40808522	40808522	8553170	3	49,106,416,	0,17052,76006,
#Deleted in new
chr8	40900015	40901854	chr8:40900015-40901854	3	-	40900015	40900015	8553170	2	128,366,	0,1473,
#Partially deleted in new
chr8	41261957	41309497	chr8:41261957-41309497	3	-	41265166	41309159	789624	3	3532,78,882,	0,41503,46658,
#Partially deleted in new
chr8	41261963	41306990	chr8:41261963-41306990	1	-	41265166	41306857	789624	3	3526,78,269,	0,41497,44758,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	41271047	41271143	chr8:41271047-41271143	3	-	41271047	41271047	5263520	1	96,	0,
#Deleted in new
chr8	41271430	41271566	chr8:41271430-41271566	7	+	41271430	41271430	16724991	1	136,	0,
#Partially deleted in new
chr8	41275114	41277003	chr8:41275114-41277003	3	-	41275114	41275114	8553170	2	213,42,	0,1847,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	41298162	41298265	chr8:41298162-41298265	3	+	41298162	41298162	8553170	1	103,	0,
#Deleted in new
chr8	41426654	41426727	chr8:41426654-41426727	3	+	41426654	41426654	5263520	1	73,	0,
#Partially deleted in new
chr8	41490395	41509769	chr8:41490395-41509769	1	+	41490854	41507106	789624	6	171,133,153,102,63,186,	0,437,7113,15515,16663,19188,
#Partially deleted in new
chr8	41490481	41510980	chr8:41490481-41510980	3	+	41490854	41507106	789624	6	136,133,153,102,63,1397,	0,351,7027,15429,16577,19102,
#Partially deleted in new
chr8	41490561	41510974	chr8:41490561-41510974	1	+	41490854	41507092	789624	6	56,133,153,102,68,1391,	0,271,6947,15349,16492,19022,
#Partially deleted in new
chr8	41490611	41509673	chr8:41490611-41509673	0	+	41490611	41490611	8553170	6	78,96,153,102,63,90,	0,258,6897,15299,16447,18972,
#Partially deleted in new
chr8	41490653	41510980	chr8:41490653-41510980	1	+	41490854	41507106	789624	5	312,153,102,63,1397,	0,6855,15257,16405,18930,
#Partially deleted in new
chr8	41502568	41510139	chr8:41502568-41510139	0	+	41502568	41502568	8553170	4	88,102,63,556,	0,3342,4490,7015,
#Partially deleted in new
chr8	41505814	41509831	chr8:41505814-41509831	0	+	41505814	41505814	8553170	3	198,63,248,	0,1244,3769,
#Deleted in new
chr8	41511239	41512521	chr8:41511239-41512521	7	+	41511239	41511239	16724991	1	1282,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	41529205	41545046	chr8:41529205-41545046	3	+	41530202	41542087	0	8	191,115,87,114,98,89,91,3056,	0,978,7154,7974,10472,10710,12603,12785,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	41529217	41542239	chr8:41529217-41542239	0	+	41530202	41541826	789624	6	179,115,87,114,91,249,	0,966,7142,7962,12591,12773,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	41529220	41538036	chr8:41529220-41538036	1	+	41530202	41537299	0	3	1078,87,857,	0,7139,7959,
#Partially deleted in new
chr8	41529226	41537301	chr8:41529226-41537301	0	+	41529226	41529226	8553170	4	170,115,87,122,	0,957,7133,7953,
#Partially deleted in new
chr8	41529229	41536452	chr8:41529229-41536452	0	+	41529229	41529229	8553170	3	167,115,93,	0,954,7130,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	41529236	41542402	chr8:41529236-41542402	1	+	41530202	41542087	0	8	152,115,87,114,98,89,91,412,	0,947,7123,7943,10441,10679,12572,12754,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	41529248	41545030	chr8:41529248-41545030	1	+	41530202	41541903	789624	7	148,115,87,114,98,89,3222,	0,935,7111,7931,10429,10667,12560,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	41534154	41578368	chr8:41534154-41578368	3	-	41534154	41534154	789624	3	256,240,63,	0,2916,44151,
#Partially deleted in new
chr8	41536357	41540004	chr8:41536357-41540004	0	+	41536357	41536357	8553170	4	89,114,98,89,	0,822,3320,3558,
#Partially deleted in new
chr8	41540380	41545044	chr8:41540380-41545044	3	-	41540380	41540380	8553170	2	30,540,	0,4124,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	41541803	41542409	chr8:41541803-41542409	0	+	41541803	41541803	8553170	2	96,419,	0,187,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	41542046	41544769	chr8:41542046-41544769	1	-	41542046	41542046	8553170	2	70,814,	0,1909,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	41577186	41598614	chr8:41577186-41598614	0	+	41577186	41577186	8553170	2	249,323,	0,21105,
#Partially deleted in new
chr8	41578187	41598925	chr8:41578187-41598925	0	+	41578187	41578187	8553170	3	91,145,634,	0,6585,20104,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr8	41578199	41625001	chr8:41578199-41625001	3	+	41599139	41621001	789624	13	79,1013,70,301,75,90,94,116,56,86,129,80,4109,	0,20092,31216,31455,32536,33703,33980,34645,36186,36763,40484,40698,42693,
#Partially deleted in new
chr8	41578214	41610812	chr8:41578214-41610812	0	+	41599277	41610812	789624	6	64,185,71,70,301,77,	0,20077,21019,31201,31440,32521,
#Partially deleted in new
chr8	41578414	41599226	chr8:41578414-41599226	0	+	41599139	41599226	789624	2	166,935,	0,19877,
#Partially deleted in new
chr8	41584771	41598665	chr8:41584771-41598665	0	+	41584771	41584771	8553170	2	146,374,	0,13520,
#Partially deleted in new
chr8	41599047	41612236	chr8:41599047-41612236	0	+	41599139	41610602	789624	7	257,70,301,23,75,90,57,	0,10368,10607,11551,11688,12855,13132,
#Partially deleted in new
chr8	41609691	41621502	chr8:41609691-41621502	3	-	41609691	41609691	8553170	2	183,546,	0,11265,
#Partially deleted in new
chr8	41610255	41615048	chr8:41610255-41615048	0	+	41610255	41610255	8553170	6	555,90,94,116,56,86,	0,1647,1924,2589,4130,4707,
#Partially deleted in new
chr8	41610777	41618813	chr8:41610777-41618813	0	+	41610777	41610777	8553170	7	33,90,94,175,56,86,130,	0,1125,1402,2008,3608,4185,7906,
#Partially deleted in new
chr8	41618531	41621373	chr8:41618531-41621373	0	+	41618531	41618531	8553170	3	281,80,481,	0,366,2361,
#Partially deleted in new
chr8	41618705	41621394	chr8:41618705-41621394	0	+	41618705	41618705	8553170	3	107,454,502,	0,192,2187,
#Deleted in new
chr8	41645177	41647359	chr8:41645177-41647359	1	-	41646448	41647355	789624	2	1517,166,	0,2016,
#Deleted in new
chr8	41646071	41650669	chr8:41646071-41650669	3	-	41646448	41650492	789624	3	623,170,559,	0,1994,4039,
#Partially deleted in new
chr8	41653219	41797622	chr8:41653219-41797622	3	-	41655726	41797538	0	42	2534,141,84,298,559,147,132,75,79,120,126,229,97,205,212,155,225,98,79,97,73,93,99,99,99,198,99,99,198,99,99,99,198,99,99,99,186,99,99,99,102,111,	0,8581,10439,15047,19134,31324,32932,34936,35291,37007,37254,39428,39885,40678,41372,41957,43143,43456,44823,46232,48330,48832,50821,51154,52923,55558,60936,61756,62432,63733,64384,64886,66441,69905,70315,71236,72541,74030,74688,80751,104816,144292,
#Partially deleted in new
chr8	41653224	41896762	chr8:41653224-41896762	1	-	41655726	41896480	0	43	2529,66,84,298,559,147,132,75,79,120,126,229,97,205,212,155,225,98,79,97,24,73,93,99,99,99,198,99,99,198,99,99,99,198,99,99,99,186,99,99,99,102,408,	0,8651,10434,15042,19129,31319,32927,34931,35286,37002,37249,39423,39880,40673,41367,41952,43138,43451,44818,46227,47206,48325,48827,50816,51149,52918,55553,60931,61751,62427,63728,64379,64881,66436,69900,70310,71231,72536,74025,74683,80746,104811,243130,
#Partially deleted in new
chr8	41653224	41797622	chr8:41653224-41797622	1	-	41661465	41797538	0	43	2529,135,66,84,298,559,147,132,75,79,120,126,229,97,205,212,155,225,98,79,97,73,93,99,99,99,198,99,99,198,99,99,99,198,99,99,99,186,99,99,99,102,111,	0,8205,8651,10434,15042,19129,31319,32927,34931,35286,37002,37249,39423,39880,40673,41367,41952,43138,43451,44818,46227,48325,48827,50816,51149,52918,55553,60931,61751,62427,63728,64379,64881,66436,69900,70310,71231,72536,74025,74683,80746,104811,144287,
#Partially deleted in new
chr8	41655300	41665261	chr8:41655300-41665261	1	-	41655726	41665023	789624	4	453,66,84,457,	0,6575,8358,9504,
#Partially deleted in new
chr8	41655300	41665286	chr8:41655300-41665286	1	-	41655726	41665023	0	4	453,141,84,482,	0,6500,8358,9504,
#Partially deleted in new
chr8	41655323	41665274	chr8:41655323-41665274	1	-	41661465	41665023	0	5	430,135,66,84,470,	0,6106,6552,8335,9481,
#Partially deleted in new
chr8	41655323	41706179	chr8:41655323-41706179	0	-	41661465	41706179	789624	27	430,135,66,84,298,73,147,132,75,79,120,126,229,97,205,212,155,225,98,79,97,24,73,93,99,99,37,	0,6106,6552,8335,12943,17030,29220,30828,32832,33187,34903,35150,37324,37781,38574,39268,39853,41039,41352,42719,44128,45107,46226,46728,48717,49050,50819,
#Partially deleted in new
chr8	41655374	41693929	chr8:41655374-41693929	0	-	41655726	41693929	789624	14	379,141,84,298,73,147,132,75,79,120,126,229,97,32,	0,6426,8284,12892,16979,29169,30777,32781,33136,34852,35099,37273,37730,38523,
#Partially deleted in new
chr8	41655439	41665830	chr8:41655439-41665830	0	-	41655439	41655439	8553170	6	314,135,66,84,105,298,	0,5990,6436,8219,9365,10093,
#Partially deleted in new
chr8	41655685	41665274	chr8:41655685-41665274	1	-	41655726	41665023	0	3	68,84,470,	0,7973,9119,
#Deleted in new
chr8	41660440	41660508	chr8:41660440-41660508	3	-	41660440	41660440	5263520	1	68,	0,
#Deleted in new
chr8	41660443	41660507	chr8:41660443-41660507	3	+	41660443	41660443	5263520	1	64,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr8	41660988	41697846	chr8:41660988-41697846	0	-	41660988	41660988	8553170	19	953,84,298,73,397,147,132,75,79,120,126,229,97,205,212,155,225,98,120,	0,2670,7278,11365,11527,23555,25163,27167,27522,29238,29485,31659,32116,32909,33603,34188,35374,35687,36738,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	41660990	41665566	chr8:41660990-41665566	3	+	41660990	41660990	8553170	2	719,369,	0,4207,
#Partially deleted in new
chr8	41661285	41663986	chr8:41661285-41663986	0	+	41661285	41661285	8553170	2	424,124,	0,2577,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	41661307	41664248	chr8:41661307-41664248	0	+	41661307	41661307	8553170	2	402,162,	0,2779,
#Partially deleted in new
chr8	41661526	41665207	chr8:41661526-41665207	0	-	41661526	41665023	789624	3	38,84,403,	0,2132,3278,
#Partially deleted in new
chr8	41668340	41690285	chr8:41668340-41690285	0	-	41672488	41690285	789624	7	224,176,147,132,75,79,59,	0,4013,16203,17811,19815,20170,21886,
#Partially deleted in new
chr8	41788881	41797593	chr8:41788881-41797593	0	-	41788881	41788881	8553170	2	416,82,	0,8630,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	41803348	41803450	chr8:41803348-41803450	3	+	41803348	41803348	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	41828164	41829934	chr8:41828164-41829934	3	-	41828164	41828164	8553170	1	1770,	0,
#Partially deleted in new
chr8	41929478	42052026	chr8:41929478-42052026	3	-	41932204	42048977	0	17	5389,313,603,208,232,94,162,142,116,119,320,136,82,116,109,925,126,	0,7777,11363,13314,14269,17112,18272,19743,25817,45225,47529,49163,51367,52360,57976,118899,122422,
#Partially deleted in new
chr8	41929478	42051994	chr8:41929478-42051994	1	-	41932204	42048977	0	18	5389,313,603,214,232,94,162,142,116,119,320,136,82,116,109,925,88,94,	0,7777,11363,13308,14269,17112,18272,19743,25817,45225,47529,49163,51367,52360,57976,118899,120141,122422,
#Partially deleted in new
chr8	41930760	42051990	chr8:41930760-42051990	1	-	41932204	42048977	0	18	4107,313,603,208,232,94,162,142,116,119,320,136,82,116,109,925,132,90,	0,6495,10081,12032,12987,15830,16990,18461,24535,43943,46247,47881,50085,51078,56694,117617,118815,121140,
#Partially deleted in new
chr8	41930761	41974734	chr8:41930761-41974734	0	-	41932204	41974734	8553170	11	4106,313,603,208,232,94,162,142,116,132,31,	0,6494,10080,12031,12986,15829,16989,18460,24534,26287,43942,
#Partially deleted in new
chr8	41933187	42051987	chr8:41933187-42051987	0	-	41933187	42048977	8553170	18	1680,313,603,208,232,94,162,142,116,119,320,136,82,116,109,925,88,87,	0,4068,7654,9605,10560,13403,14563,16034,22108,41516,43820,45454,47658,48651,54267,115190,116432,118713,
#Partially deleted in new
chr8	41934399	42051987	chr8:41934399-42051987	0	-	41978637	42048977	8553170	18	468,313,603,208,232,94,162,142,116,119,320,157,82,116,109,925,132,87,	0,2856,6442,8393,9348,12191,13351,14822,20896,40304,42608,44221,46446,47439,53055,113978,115176,117501,
#Partially deleted in new
chr8	41934773	41958363	chr8:41934773-41958363	0	-	41934773	41934773	8553170	10	94,313,603,208,232,94,162,142,116,1315,	0,2482,6068,8019,8974,11817,12977,14448,20522,22275,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	41934788	41944860	chr8:41934788-41944860	0	-	41934788	41934788	8553170	2	2780,4019,	0,6053,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	41938344	41941876	chr8:41938344-41941876	0	-	41938344	41938344	8553170	1	3532,	0,
#Partially deleted in new
chr8	41942048	42051987	chr8:41942048-42051987	1	-	41942780	42048977	789624	14	952,232,94,162,142,116,119,320,136,82,116,109,925,87,	0,1699,4542,5702,7173,13247,32655,34959,36593,38797,39790,45406,106329,109852,
#Partially deleted in new
chr8	41946512	42051984	chr8:41946512-42051984	0	-	41946512	41946512	8553170	12	1400,142,116,119,320,136,82,116,109,925,132,84,	0,2709,8783,28191,30495,32129,34333,35326,40942,101865,103063,105388,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	41964350	41977135	chr8:41964350-41977135	0	-	41964579	41977135	8553170	3	274,119,128,	0,10353,12657,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	41973403	42051987	chr8:41973403-42051987	0	-	41973403	41973403	8553170	9	1419,320,136,82,116,109,925,132,87,	0,3604,5238,7442,8435,14051,74974,76172,78497,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	41973421	42051994	chr8:41973421-42051994	0	-	41973421	41973421	8553170	9	1401,320,136,82,116,109,925,88,94,	0,3586,5220,7424,8417,14033,74956,76198,78479,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	41973497	42051987	chr8:41973497-42051987	0	-	41973497	41973497	8553170	8	1325,320,136,82,116,109,925,87,	0,3510,5144,7348,8341,13957,74880,78403,
#Deleted in new
chr8	41974799	41977490	chr8:41974799-41977490	0	-	41974799	41974799	8553170	2	23,483,	0,2208,
#Deleted in new
chr8	42043503	42043575	chr8:42043503-42043575	3	-	42043503	42043503	8553170	1	72,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	42045877	42051987	chr8:42045877-42051987	1	-	42048332	42048977	789624	2	3830,87,	0,6023,
#Deleted in new
chr8	42101317	42101836	chr8:42101317-42101836	7	+	42101317	42101317	16724991	1	519,	0,
#Partially deleted in new
chr8	42128773	42129249	chr8:42128773-42129249	7	-	42128773	42128773	16724991	1	476,	0,
#Partially deleted in new
chr8	42139460	42139752	chr8:42139460-42139752	3	-	42139460	42139460	8553170	1	292,	0,
#Deleted in new
chr8	42151771	42152763	chr8:42151771-42152763	3	-	42151771	42151771	8553170	1	992,	0,
#Partially deleted in new
chr8	42152945	42171183	chr8:42152945-42171183	3	+	42154687	42169061	789624	9	160,395,172,138,86,134,208,145,2223,	0,1620,4995,9335,12125,12481,14218,14720,16015,
#Partially deleted in new
chr8	42152945	42171182	chr8:42152945-42171182	1	+	42154687	42169061	789624	10	160,59,345,172,138,86,134,208,145,2222,	0,1532,1670,4995,9335,12125,12481,14218,14720,16015,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	42152992	42165779	chr8:42152992-42165779	0	+	42154687	42156035	789624	6	1968,61,172,138,86,353,	0,2986,4948,9288,12078,12434,
#Partially deleted in new
chr8	42153010	42171182	chr8:42153010-42171182	1	+	42154687	42169061	789624	9	95,345,172,138,86,134,208,145,2222,	0,1605,4930,9270,12060,12416,14153,14655,15950,
#Partially deleted in new
chr8	42153028	42169216	chr8:42153028-42169216	0	+	42153028	42153028	8553170	3	77,145,256,	0,14637,15932,
#Partially deleted in new
chr8	42153073	42169011	chr8:42153073-42169011	0	+	42158012	42169011	789624	8	32,172,138,86,134,208,145,51,	0,4867,9207,11997,12353,14090,14592,15887,
#Partially deleted in new
chr8	42153084	42169131	chr8:42153084-42169131	0	+	42154687	42167684	789624	8	21,345,172,138,86,134,145,171,	0,1531,4856,9196,11986,12342,14581,15876,
#Partially deleted in new
chr8	42153143	42158085	chr8:42153143-42158085	0	+	42154687	42158085	789624	3	84,345,145,	0,1472,4797,
#Partially deleted in new
chr8	42153159	42154677	chr8:42153159-42154677	0	+	42153159	42153159	8553170	3	68,59,62,	0,1318,1456,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	42154130	42154718	chr8:42154130-42154718	0	+	42154687	42154718	789624	2	406,103,	0,485,
#Partially deleted in new
chr8	42154615	42165779	chr8:42154615-42165779	1	+	42154687	42165564	789624	5	345,172,138,86,353,	0,3325,7665,10455,10811,
#Partially deleted in new
chr8	42155761	42165133	chr8:42155761-42165133	0	+	42155761	42155761	8553170	4	278,172,138,63,	0,2179,6519,9309,
#Partially deleted in new
chr8	42157940	42165770	chr8:42157940-42165770	0	+	42157940	42165564	789624	3	172,86,344,	0,7130,7486,
#Partially deleted in new
chr8	42162068	42167193	chr8:42162068-42167193	0	+	42162068	42162068	8553170	4	350,86,134,30,	0,3002,3358,5095,
#Deleted in new
chr8	42166915	42167755	chr8:42166915-42167755	0	+	42166915	42166915	8553170	2	456,90,	0,750,
#Deleted in new
chr8	42167288	42169141	chr8:42167288-42169141	0	+	42167288	42168972	789624	4	83,145,53,181,	0,377,908,1672,
#Deleted in new
chr8	42167764	42171673	chr8:42167764-42171673	0	+	42167764	42169061	789624	4	46,325,171,145,	0,1196,2124,3764,
#Partially deleted in new
chr8	42175232	42207724	chr8:42175232-42207724	3	-	42175992	42193185	0	14	919,167,141,137,196,86,172,92,175,111,138,43,98,231,	0,3664,4693,5009,5257,6704,7486,9848,12165,12673,13701,16139,17881,32261,
#Partially deleted in new
chr8	42175232	42207565	chr8:42175232-42207565	1	-	42175992	42193185	0	15	919,167,141,137,196,86,172,92,175,111,138,43,98,52,72,	0,3664,4693,5009,5257,6704,7486,9848,12165,12673,13701,16139,17881,31414,32261,
#Partially deleted in new
chr8	42175236	42207676	chr8:42175236-42207676	1	-	42175992	42193185	0	13	915,167,141,137,196,86,172,92,175,111,43,98,183,	0,3660,4689,5005,5253,6700,7482,9844,12161,12669,16135,17877,32257,
#Partially deleted in new
chr8	42175560	42207565	chr8:42175560-42207565	1	-	42175992	42193185	789624	13	591,167,141,137,196,86,172,78,111,138,43,98,72,	0,3336,4365,4681,4929,6376,7158,9520,12345,13373,15811,17553,31933,
#Partially deleted in new
chr8	42175746	42207565	chr8:42175746-42207565	1	-	42175992	42193185	789624	11	405,167,141,137,196,86,172,138,43,98,72,	0,3150,4179,4495,4743,6190,6972,13187,15625,17367,31747,
#Partially deleted in new
chr8	42175899	42207565	chr8:42175899-42207565	1	-	42175992	42193185	789624	12	252,167,141,137,196,86,172,111,138,43,98,72,	0,2997,4026,4342,4590,6037,6819,12006,13034,15472,17214,31594,
#Deleted in new
chr8	42180082	42180764	chr8:42180082-42180764	0	-	42180082	42180082	8553170	2	296,275,	0,407,
#Partially deleted in new
chr8	42180305	42187932	chr8:42180305-42187932	0	-	42181981	42187932	789624	6	73,196,86,47,175,27,	0,184,1631,2413,7092,7600,
#Partially deleted in new
chr8	42182339	42185113	chr8:42182339-42185113	0	-	42182339	42182339	8553170	2	551,33,	0,2741,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	42184694	42188489	chr8:42184694-42188489	0	-	42184694	42184694	8553170	2	2878,584,	0,3211,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	42187400	42193727	chr8:42187400-42193727	0	-	42187400	42193185	789624	6	172,111,138,43,98,108,	0,505,1533,3971,5713,6219,
#Partially deleted in new
chr8	42187464	42195698	chr8:42187464-42195698	0	-	42187464	42193185	789624	6	108,111,138,43,98,51,	0,441,1469,3907,5649,8183,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	42249051	42263406	chr8:42249051-42263406	0	-	42249051	42249051	8553170	2	310,78,	0,14277,
#Partially deleted in new
chr8	42266128	42271197	chr8:42266128-42271197	1	-	42266128	42266128	8553170	2	268,547,	0,4522,
#Partially deleted in new
chr8	42271301	42332653	chr8:42271301-42332653	1	+	42272182	42330979	0	21	168,123,118,70,89,90,125,108,130,195,115,124,152,62,110,50,100,148,128,91,1740,	0,781,18854,22141,33885,35041,37599,43020,44908,45408,46355,47250,47968,48283,49433,50594,50752,51045,54668,57822,59612,
#Partially deleted in new
chr8	42271301	42332460	chr8:42271301-42332460	3	+	42272100	42330979	0	22	168,123,95,118,70,89,90,125,108,130,195,115,124,152,62,110,50,100,148,128,91,1547,	0,781,17332,18854,22141,33885,35041,37599,43020,44908,45408,46355,47250,47968,48283,49433,50594,50752,51045,54668,57822,59612,
#Partially deleted in new
chr8	42271301	42332653	chr8:42271301-42332653	1	+	42272100	42322066	789624	21	168,123,95,118,70,89,90,125,108,130,195,115,124,152,110,50,100,148,128,91,1740,	0,781,17332,18854,22141,33885,35041,37599,43020,44908,45408,46355,47250,47968,49433,50594,50752,51045,54668,57822,59612,
#Partially deleted in new
chr8	42271309	42306354	chr8:42271309-42306354	0	+	42272100	42290197	789624	6	160,123,118,126,89,12,	0,773,18846,22133,33877,35033,
#Partially deleted in new
chr8	42271315	42331132	chr8:42271315-42331132	0	+	42272100	42290197	789624	21	154,123,118,70,89,90,125,108,130,195,115,124,152,62,110,50,100,148,128,91,219,	0,767,18840,22127,33871,35027,37585,43006,44894,45394,46341,47236,47954,48269,49419,50580,50738,51031,54654,57808,59598,
#Partially deleted in new
chr8	42271317	42308998	chr8:42271317-42308998	0	+	42272100	42305237	789624	5	152,123,89,65,98,	0,765,33869,35050,37583,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	42271317	42309765	chr8:42271317-42309765	0	+	42271317	42271317	8553170	9	152,123,95,118,70,89,90,125,304,	0,765,17316,18838,22125,33869,35025,37583,38144,
#Partially deleted in new
chr8	42271317	42331067	chr8:42271317-42331067	1	+	42271370	42330979	0	21	152,95,118,70,89,90,125,108,130,195,115,124,152,62,110,50,100,148,128,91,154,	0,17316,18838,22125,33869,35025,37583,43004,44892,45392,46339,47234,47952,48267,49417,50578,50736,51029,54652,57806,59596,
#Partially deleted in new
chr8	42271317	42322461	chr8:42271317-42322461	0	+	42272100	42290197	789624	17	152,123,118,70,89,90,125,108,130,195,115,124,152,110,50,100,115,	0,765,18838,22125,33869,35025,37583,43004,44892,45392,46339,47234,47952,49417,50578,50736,51029,
#Partially deleted in new
chr8	42271317	42332450	chr8:42271317-42332450	1	+	42272100	42330979	8553170	22	152,123,95,118,70,89,90,125,108,130,195,115,124,152,62,110,50,100,148,128,91,1537,	0,765,17316,18838,22125,33869,35025,37583,43004,44892,45392,46339,47234,47952,48267,49417,50578,50736,51029,54652,57806,59596,
#Partially deleted in new
chr8	42271318	42319750	chr8:42271318-42319750	0	+	42271318	42271318	8553170	11	151,123,89,90,125,108,130,195,115,124,481,	0,764,33868,35024,37582,43003,44891,45391,46338,47233,47951,
#Partially deleted in new
chr8	42271318	42331910	chr8:42271318-42331910	0	+	42272100	42314348	789624	16	151,123,108,130,195,115,124,152,62,110,50,100,148,128,91,997,	0,764,43003,44891,45391,46338,47233,47951,48266,49416,50577,50735,51028,54651,57805,59595,
#Partially deleted in new
chr8	42271333	42332450	chr8:42271333-42332450	0	+	42272100	42305237	789624	22	136,123,95,118,126,89,90,125,108,130,195,115,124,152,62,110,50,100,148,128,91,1537,	0,749,17300,18822,22109,33853,35009,37567,42988,44876,45376,46323,47218,47936,48251,49401,50562,50720,51013,54636,57790,59580,
#Partially deleted in new
chr8	42271369	42272429	chr8:42271369-42272429	1	+	42272100	42272331	789624	2	100,347,	0,713,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr8	42271388	42332455	chr8:42271388-42332455	0	+	42271388	42271388	8553170	19	81,123,118,70,89,90,125,108,130,195,115,124,1575,50,100,148,128,91,1542,	0,694,18767,22054,33798,34954,37512,42933,44821,45321,46268,47163,47881,50507,50665,50958,54581,57735,59525,
#Partially deleted in new
chr8	42271389	42308932	chr8:42271389-42308932	0	+	42272100	42290197	789624	7	80,123,118,70,89,65,32,	0,693,18766,22053,33797,34978,37511,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr8	42271389	42317224	chr8:42271389-42317224	0	+	42271389	42271389	8553170	11	80,123,95,118,70,89,90,125,108,130,515,	0,693,17244,18766,22053,33797,34953,37511,42932,44820,45320,
#Partially deleted in new
chr8	42271435	42329215	chr8:42271435-42329215	0	+	42272100	42322066	789624	20	34,123,95,118,70,89,90,125,108,130,195,115,124,152,110,50,100,148,128,92,	0,647,17198,18720,22007,33751,34907,37465,42886,44774,45274,46221,47116,47834,49299,50460,50618,50911,54534,57688,
#Partially deleted in new
chr8	42271462	42331909	chr8:42271462-42331909	0	+	42272100	42322066	789624	20	743,95,118,70,89,90,125,108,130,195,115,124,152,110,50,100,148,128,91,996,	0,17171,18693,21980,33724,34880,37438,42859,44747,45247,46194,47089,47807,49272,50433,50591,50884,54507,57661,59451,
#Partially deleted in new
chr8	42271571	42305236	chr8:42271571-42305236	0	+	42272100	42290197	789624	5	162,123,118,70,50,	0,511,18584,21871,33615,
#Partially deleted in new
chr8	42272082	42332037	chr8:42272082-42332037	1	+	42272100	42331431	789624	2	123,831,	0,59124,
#Partially deleted in new
chr8	42272082	42331121	chr8:42272082-42331121	0	+	42272100	42317712	789624	21	123,95,118,70,89,90,125,108,130,195,62,124,152,62,110,50,100,148,128,91,208,	0,16551,18073,21360,33104,34260,36818,42239,44127,44627,45627,46469,47187,47502,48652,49813,49971,50264,53887,57041,58831,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	42314024	42316256	chr8:42314024-42316256	0	+	42314024	42314024	8553170	2	405,47,	0,2185,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr8	42314370	42331527	chr8:42314370-42331527	0	+	42314370	42314370	8553170	13	59,130,195,62,124,1575,50,100,148,128,91,132,614,	0,1839,2339,3339,4181,4899,7525,7683,7976,11599,14753,14997,16543,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	42317656	42320517	chr8:42317656-42320517	0	+	42317656	42317656	8553170	5	115,124,152,62,45,	0,895,1613,1928,2816,
#Deleted in new
chr8	42318607	42319870	chr8:42318607-42319870	0	+	42318607	42318607	8553170	3	257,152,118,	0,662,1145,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	42319155	42332316	chr8:42319155-42332316	0	+	42319155	42319155	8553170	6	266,110,50,441,128,3193,	0,1579,2740,2898,6814,9968,
#Deleted in new
chr8	42319249	42319878	chr8:42319249-42319878	0	+	42319249	42319249	8553170	2	172,294,	0,335,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	42320705	42331609	chr8:42320705-42331609	0	+	42320705	42320705	8553170	6	1240,100,148,128,91,696,	0,1348,1641,5264,8418,10208,
#Partially deleted in new
chr8	42322417	42326468	chr8:42322417-42326468	0	+	42322417	42322417	8553170	2	77,499,	0,3552,
#Partially deleted in new
chr8	42322440	42329314	chr8:42322440-42329314	0	+	42322440	42322440	8553170	3	54,128,191,	0,3529,6683,
#Partially deleted in new
chr8	42325293	42329187	chr8:42325293-42329187	0	+	42325293	42325293	8553170	3	68,128,64,	0,676,3830,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	42325609	42331909	chr8:42325609-42331909	0	+	42325609	42325609	8553170	3	488,91,996,	0,3514,5304,
#Partially deleted in new
chr8	42338453	42357203	chr8:42338453-42357203	0	+	42354493	42357203	789624	8	232,67,75,59,50,105,52,35,	0,6499,10562,11553,14065,15963,17062,18715,
#Partially deleted in new
chr8	42338454	42371808	chr8:42338454-42371808	3	+	42338624	42371657	0	14	231,58,67,75,59,50,52,55,73,71,87,65,140,246,	0,557,6498,10561,11552,14064,17061,18714,18865,22840,24157,30816,31394,33108,
#Partially deleted in new
chr8	42338458	42361361	chr8:42338458-42361361	0	+	42357208	42361361	789624	9	227,67,75,59,50,52,55,73,67,	0,6494,10557,11548,14060,17057,18710,18861,22836,
#Partially deleted in new
chr8	42338481	42369297	chr8:42338481-42369297	0	+	42338624	42369297	789624	13	204,58,67,75,59,50,105,52,55,73,71,87,27,	0,530,6471,10534,11525,14037,15935,17034,18687,18838,22813,24130,30789,
#Partially deleted in new
chr8	42338493	42339380	chr8:42338493-42339380	0	+	42338493	42338493	8553170	2	192,369,	0,518,
#Partially deleted in new
chr8	42338493	42349289	chr8:42338493-42349289	0	+	42338493	42338493	8553170	4	192,58,67,274,	0,518,6459,10522,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	42338493	42340147	chr8:42338493-42340147	0	+	42338493	42338493	8553170	2	135,455,	0,1199,
#Partially deleted in new
chr8	42338506	42371765	chr8:42338506-42371765	0	+	42338624	42361127	789624	15	179,58,67,75,59,50,52,55,73,107,71,87,65,140,203,	0,505,6446,10509,11500,14012,17009,18662,18813,22589,22788,24105,30764,31342,33056,
#Partially deleted in new
chr8	42338604	42369329	chr8:42338604-42369329	0	+	42338624	42349025	789624	11	81,58,75,59,50,52,55,73,71,87,59,	0,407,10411,11402,13914,16911,18564,18715,22690,24007,30666,
#Deleted in new
chr8	42341766	42342634	chr8:42341766-42342634	7	-	42341766	42341766	16724991	1	868,	0,
#Partially deleted in new
chr8	42344959	42369988	chr8:42344959-42369988	0	+	42344959	42352548	789624	9	60,50,52,55,73,71,87,65,140,	0,7559,10556,12209,12360,16335,17652,24311,24889,
#Partially deleted in new
chr8	42349038	42371808	chr8:42349038-42371808	0	+	42349038	42371657	789624	10	52,59,50,52,55,73,71,65,140,246,	0,968,3480,6477,8130,8281,12256,20232,20810,22524,
#Partially deleted in new
chr8	42355458	42361712	chr8:42355458-42361712	0	+	42355458	42355458	8553170	4	109,55,73,418,	0,1710,1861,5836,
#Partially deleted in new
chr8	42357173	42371752	chr8:42357173-42371752	0	+	42357173	42371727	789624	8	50,73,71,87,65,140,68,190,	0,146,4121,5438,12097,12675,12940,14389,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	42357197	42357942	chr8:42357197-42357942	0	+	42357197	42357197	8553170	2	26,623,	0,122,
#Partially deleted in new
chr8	42361297	42371808	chr8:42361297-42371808	0	+	42361297	42371727	789624	3	68,87,246,	0,1314,10265,
#Partially deleted in new
chr8	42368935	42371808	chr8:42368935-42371808	1	+	42369918	42371657	789624	3	400,140,246,	0,913,2627,
#Partially deleted in new
chr8	42369606	42371808	chr8:42369606-42371808	0	+	42369606	42369606	8553170	2	382,246,	0,1956,
#Partially deleted in new
chr8	42374067	42377232	chr8:42374067-42377232	3	-	42374099	42377045	789624	4	292,153,151,298,	0,693,1612,2867,
#Partially deleted in new
chr8	42391623	42401886	chr8:42391623-42401886	0	+	42394257	42401886	789624	6	305,40,69,153,53,99,	0,2221,2586,7088,8027,10164,
#Partially deleted in new
chr8	42391845	42401959	chr8:42391845-42401959	0	+	42394211	42401959	789624	6	83,69,50,153,53,172,	0,2364,3238,6866,7805,9942,
#Partially deleted in new
chr8	42391855	42401940	chr8:42391855-42401940	0	+	42394211	42401940	789624	7	73,74,69,50,153,53,153,	0,1955,2354,3228,6856,7795,9932,
#Partially deleted in new
chr8	42391863	42405749	chr8:42391863-42405749	1	+	42394211	42405462	789624	9	65,40,69,50,3,153,53,49,317,	0,1981,2346,3220,4814,6848,7787,9924,13569,
#Partially deleted in new
chr8	42391886	42397599	chr8:42391886-42397599	0	+	42391886	42391886	8553170	5	42,40,69,50,922,	0,1958,2323,3197,4791,
#Partially deleted in new
chr8	42391889	42402164	chr8:42391889-42402164	0	+	42391889	42391889	8553170	8	39,40,69,50,3,153,53,377,	0,1955,2320,3194,4788,6822,7761,9898,
#Partially deleted in new
chr8	42391901	42401901	chr8:42391901-42401901	0	+	42394211	42398743	789624	8	27,40,69,50,25,153,53,114,	0,1943,2308,3182,4754,6810,7749,9886,
#Partially deleted in new
chr8	42391902	42405897	chr8:42391902-42405897	3	+	42394211	42405462	789624	10	26,40,69,50,153,53,228,151,58,527,	0,1942,2307,3181,6809,7748,9885,11408,12964,13468,
#Partially deleted in new
chr8	42391902	42405488	chr8:42391902-42405488	1	+	42394211	42405462	789624	11	26,40,69,50,3,153,53,228,151,58,118,	0,1942,2307,3181,4775,6809,7748,9885,11408,12964,13468,
#Partially deleted in new
chr8	42394209	42403441	chr8:42394209-42403441	0	+	42394211	42401820	789624	5	69,50,153,228,131,	0,874,4502,7578,9101,
#Partially deleted in new
chr8	42399549	42401905	chr8:42399549-42401905	0	+	42399549	42399549	8553170	2	154,118,	0,2238,
#Partially deleted in new
chr8	42403031	42405415	chr8:42403031-42405415	0	+	42403031	42403031	8553170	3	430,58,45,	0,1835,2339,
#Partially deleted in new
chr8	42416474	42541926	chr8:42416474-42541926	3	-	42417802	42472390	789624	11	1493,85,186,589,204,117,97,86,141,553,106,	0,12283,13589,20514,22975,28171,43421,46530,49302,55627,125346,
#Partially deleted in new
chr8	42417463	42501460	chr8:42417463-42501460	1	-	42417802	42472390	789624	11	504,85,186,589,204,117,97,86,141,553,430,	0,11294,12600,19525,21986,27182,42432,45541,48313,54638,83567,
#Partially deleted in new
chr8	42417802	42541512	chr8:42417802-42541512	1	-	42417802	42472390	789624	11	165,85,186,589,204,117,97,86,141,553,61,	0,10955,12261,19186,21647,26843,42093,45202,47974,54299,123649,
#Partially deleted in new
chr8	42437474	42463371	chr8:42437474-42463371	0	-	42437474	42437474	8553170	6	103,204,117,97,86,156,	0,1975,7171,22421,25530,25741,
#Partially deleted in new
chr8	42439466	42460168	chr8:42439466-42460168	0	-	42439466	42439466	8553170	3	187,117,273,	0,5179,20429,
#Partially deleted in new
chr8	42463077	42534996	chr8:42463077-42534996	0	-	42471172	42472390	789624	5	13,141,135,553,126,	0,2699,7989,9024,71793,
#Partially deleted in new
chr8	42472156	42541054	chr8:42472156-42541054	0	-	42472156	42472390	789624	2	498,75,	0,68823,
#Partially deleted in new
chr8	42472178	42501243	chr8:42472178-42501243	0	-	42472178	42472390	789624	2	476,57,	0,29008,
#Partially deleted in new
chr8	42472248	42502628	chr8:42472248-42502628	0	-	42472248	42472390	789624	2	406,345,	0,30035,
#Partially deleted in new
chr8	42472305	42541581	chr8:42472305-42541581	0	-	42472305	42472390	789624	3	349,164,44,	0,62866,69232,
#Partially deleted in new
chr8	42472338	42541711	chr8:42472338-42541711	0	-	42472338	42472338	8553170	3	316,55,174,	0,8120,69199,
#Deleted in new
chr8	42484599	42485019	chr8:42484599-42485019	7	+	42484599	42484599	16724991	1	420,	0,
#Partially deleted in new
chr8	42534659	42541503	chr8:42534659-42541503	0	-	42534659	42534659	8553170	2	676,589,	0,6255,
#Deleted in new
chr8	42535186	42536593	chr8:42535186-42536593	0	-	42535186	42535186	8553170	2	149,239,	0,1168,
#Partially deleted in new
chr8	42536354	42541208	chr8:42536354-42541208	0	-	42536354	42536354	8553170	2	117,294,	0,4560,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	42537528	42538304	chr8:42537528-42538304	3	-	42537528	42537528	8553170	2	609,99,	0,677,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	42541154	42555193	chr8:42541154-42555193	3	+	42546472	42552608	789624	4	45,138,125,2650,	0,5314,7501,11389,
#Partially deleted in new
chr8	42541597	42548780	chr8:42541597-42548780	0	+	42548671	42548780	789624	2	108,125,	0,7058,
#Partially deleted in new
chr8	42541607	42552980	chr8:42541607-42552980	1	+	42546472	42552608	789624	4	766,138,125,437,	0,4861,7048,10936,
#Partially deleted in new
chr8	42541612	42552980	chr8:42541612-42552980	1	+	42546472	42552608	789624	4	93,138,125,437,	0,4856,7043,10931,
#Partially deleted in new
chr8	42541657	42552829	chr8:42541657-42552829	0	+	42546472	42548501	789624	4	48,138,406,286,	0,4811,6717,10886,
#Partially deleted in new
chr8	42541661	42548444	chr8:42541661-42548444	0	+	42541661	42541661	8553170	3	712,138,70,	0,4807,6713,
#Partially deleted in new
chr8	42541792	42552608	chr8:42541792-42552608	1	+	42546472	42552608	789624	4	363,138,125,65,	0,4676,6863,10751,
#Partially deleted in new
chr8	42546427	42552726	chr8:42546427-42552726	1	+	42546472	42552608	789624	3	179,125,183,	0,2228,6116,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	42697375	42708758	chr8:42697375-42708758	0	+	42697375	42697375	8553170	4	223,116,133,42,	0,2036,6973,11341,
#Partially deleted in new
chr8	42697375	42710435	chr8:42697375-42710435	0	+	42710407	42710435	789624	4	223,133,152,46,	0,6973,11341,13014,
#Partially deleted in new
chr8	42697418	42737407	chr8:42697418-42737407	3	+	42697546	42736618	789624	6	180,152,45,110,883,924,	0,11298,12971,33175,34248,39065,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	42705582	42721946	chr8:42705582-42721946	3	-	42705582	42705582	8553170	3	411,126,145,	0,9287,16219,
#Deleted in new
chr8	42725546	42726228	chr8:42725546-42726228	7	-	42725546	42725546	16724991	1	682,	0,
#Partially deleted in new
chr8	42752619	42768786	chr8:42752619-42768786	3	-	42753178	42768430	789624	6	691,979,110,45,140,435,	0,3226,4308,6449,12445,15732,
#Partially deleted in new
chr8	42752926	42768610	chr8:42752926-42768610	1	-	42753178	42768430	789624	5	384,979,110,140,259,	0,2919,4001,12138,15425,
#Duplicated in new
chr8	42756628	42796392	chr8:42756628-42796392	0	-	42756628	42759095	789624	5	196,110,45,140,60,	0,299,2440,8436,39704,
#Partially deleted in new
chr8	42756939	42768632	chr8:42756939-42768632	0	-	42756939	42756939	8553170	5	98,45,44,140,281,	0,2129,2421,8125,11412,
#Partially deleted in new
chr8	42764972	42768648	chr8:42764972-42768648	0	-	42764972	42764972	8553170	2	232,297,	0,3379,
#Partially deleted in new
chr8	42836673	42843325	chr8:42836673-42843325	3	-	42837961	42843094	0	3	1663,196,302,	0,2512,6350,
#Partially deleted in new
chr8	42836675	42843305	chr8:42836675-42843305	1	-	42838245	42843094	0	2	1661,282,	0,6348,
#Partially deleted in new
chr8	42838144	42843201	chr8:42838144-42843201	0	-	42838144	42843094	789624	3	87,196,178,	0,1041,4879,
#Partially deleted in new
chr8	42839207	42842788	chr8:42839207-42842788	0	-	42839207	42839207	8553170	2	174,301,	0,3280,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	42849636	42896585	chr8:42849636-42896585	1	-	42850790	42887864	789624	6	1361,74,109,76,144,102,	0,15779,20367,24294,38091,46847,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	42853296	42896723	chr8:42853296-42896723	3	-	42856158	42887864	789624	7	3132,111,74,109,76,144,470,	0,8448,12119,16707,20634,34431,42957,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	42853300	42896721	chr8:42853300-42896721	1	-	42856158	42887864	789624	7	3128,111,74,109,76,144,238,	0,8444,12115,16703,20630,34427,43183,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	42855247	42896655	chr8:42855247-42896655	0	-	42861826	42887864	789624	6	1181,111,109,76,144,402,	0,6497,14756,18683,32480,41006,
#Partially deleted in new
chr8	42855706	42896706	chr8:42855706-42896706	1	-	42856158	42870073	789624	7	722,111,74,109,76,23,223,	0,6038,9709,14297,18224,32142,40777,
#Partially deleted in new
chr8	42855708	42896588	chr8:42855708-42896588	1	-	42861826	42887864	789624	6	720,111,109,76,144,105,	0,6036,14295,18222,32019,40775,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	42861329	42896723	chr8:42861329-42896723	0	-	42861329	42861329	8553170	6	526,74,109,76,144,240,	0,4086,8674,12601,26398,35154,
#Partially deleted in new
chr8	42865465	42896598	chr8:42865465-42896598	0	-	42865465	42887864	789624	6	24,109,76,144,112,115,	0,4538,8465,22262,23837,31018,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	42881235	42881517	chr8:42881235-42881517	3	+	42881235	42881235	8553170	1	282,	0,
#Partially deleted in new
chr8	42887727	42897290	chr8:42887727-42897290	0	-	42887727	42887864	789624	2	144,51,	0,9512,
#Deleted in new
chr8	42896196	42896275	chr8:42896196-42896275	3	-	42896196	42896196	5263520	1	79,	0,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr8	42896931	43030539	chr8:42896931-43030539	3	+	42897131	43018498	0	22	257,86,73,51,133,68,63,84,164,141,202,111,88,70,141,88,35,83,101,105,72,12182,	0,9241,28625,33190,46381,53456,60162,62299,67379,69541,71081,76357,77175,85695,89723,100618,105175,110915,113373,116119,116397,121426,
#Partially deleted in new
chr8	42896945	42998156	chr8:42896945-42998156	0	+	42896945	42896945	8553170	16	243,86,73,51,133,68,63,84,164,141,202,111,88,70,141,607,	0,9227,28611,33176,46367,53442,60148,62285,67365,69527,71067,76343,77161,85681,89709,100604,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	42949387	42949495	chr8:42949387-42949495	3	-	42949387	42949387	8553170	1	108,	0,
#Partially deleted in new
chr8	42974116	43010348	chr8:42974116-43010348	0	+	42974116	42994449	789624	8	78,70,141,59,88,35,83,44,	0,8510,12538,20317,23433,27990,33730,36188,
#Partially deleted in new
chr8	42997589	43018392	chr8:42997589-43018392	0	+	42997589	43018392	789624	8	48,6,35,83,101,105,72,35,	0,2681,4517,10257,12715,15461,15739,20768,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	43000818	43013121	chr8:43000818-43013121	0	+	43000818	43000818	8553170	5	268,35,83,101,71,	0,1288,7028,9486,12232,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	43018404	43028112	chr8:43018404-43028112	0	+	43018404	43027432	789624	2	90,684,	0,9024,
#Partially deleted in new
chr8	43018423	43077334	chr8:43018423-43077334	3	+	43018423	43059117	789624	6	71,86,115,105,127,119,	0,40668,45677,51131,53757,58792,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	43034193	43069583	chr8:43034193-43069583	0	+	43034193	43034193	8553170	4	199,86,115,29,	0,24898,29907,35361,
#Partially deleted in new
chr8	43056152	43085788	chr8:43056152-43085788	3	+	43056346	43085282	0	9	394,86,115,105,127,149,63,172,629,	0,2939,7948,13402,16028,21063,26965,28557,29007,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	43056307	43085788	chr8:43056307-43085788	0	+	43056346	43064104	789624	8	239,115,105,127,3226,63,172,629,	0,7793,13247,15873,20908,26810,28402,28852,
#Partially deleted in new
chr8	43056327	43077272	chr8:43056327-43077272	0	+	43056327	43056327	8553170	5	219,86,115,105,57,	0,2764,7773,13227,20888,
#Partially deleted in new
chr8	43056329	43085193	chr8:43056329-43085193	0	+	43056346	43064104	789624	8	217,115,105,127,149,63,172,34,	0,7771,13225,15851,20886,26788,28380,28830,
#Partially deleted in new
chr8	43056330	43084757	chr8:43056330-43084757	0	+	43056346	43077264	789624	5	216,105,149,63,48,	0,13224,20885,26787,28379,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	43056354	43070353	chr8:43056354-43070353	0	+	43056354	43056354	8553170	5	192,86,115,105,252,	0,2737,7746,13200,13747,
#Partially deleted in new
chr8	43056361	43077226	chr8:43056361-43077226	0	+	43056361	43077226	789624	6	146,86,115,105,127,11,	0,2730,7739,13193,15819,20854,
#Partially deleted in new
chr8	43056414	43077385	chr8:43056414-43077385	0	+	43056414	43056414	8553170	4	132,105,127,170,	0,13140,15766,20801,
#Partially deleted in new
chr8	43056591	43072307	chr8:43056591-43072307	0	+	43069606	43072307	789624	4	169,115,105,127,	0,7509,12963,15589,
#Partially deleted in new
chr8	43056672	43085780	chr8:43056672-43085780	1	+	43069606	43085282	789624	10	635,86,115,105,127,149,63,172,299,199,	0,2419,7428,12882,15508,20543,26445,28037,28487,28909,
#Partially deleted in new
chr8	43058951	43084798	chr8:43058951-43084798	0	+	43059077	43084798	789624	7	226,115,105,127,149,63,89,	0,5149,10603,13229,18264,24166,25758,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	43073473	43073618	chr8:43073473-43073618	3	+	43073473	43073473	8553170	1	145,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	43076646	43085780	chr8:43076646-43085780	0	+	43076646	43076646	8553170	3	6534,172,621,	0,8063,8513,
#Deleted in new
chr8	43084627	43085506	chr8:43084627-43085506	0	+	43084627	43084627	8553170	2	254,347,	0,532,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	43093505	43123180	chr8:43093505-43123180	1	+	43103548	43122877	789624	4	58,92,303,1074,	0,4018,10022,28601,
#Partially deleted in new
chr8	43093514	43122226	chr8:43093514-43122226	0	+	43103548	43122226	789624	4	49,92,303,120,	0,4009,10013,28592,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	43093517	43123434	chr8:43093517-43123434	3	+	43103548	43122877	789624	5	46,92,96,303,1328,	0,4006,8987,10010,28589,
#Deleted in new
chr8	43125994	43126397	chr8:43125994-43126397	7	-	43125994	43125994	16724991	1	403,	0,
#Partially deleted in new
chr8	43140454	43202855	chr8:43140454-43202855	3	+	43140496	43199569	789624	18	160,116,137,122,70,70,110,77,31,161,116,122,127,87,78,71,113,3468,	0,6493,18120,18468,20983,28718,30130,31855,33258,37619,41690,51019,51849,53302,56493,57217,57385,58933,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	43140503	43174232	chr8:43140503-43174232	0	+	43146979	43168049	789624	10	111,116,137,122,70,118,70,110,77,520,	0,6444,18071,18419,20934,27440,28669,30081,31806,33209,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	43172317	43191589	chr8:43172317-43191589	0	+	43172325	43191589	789624	6	69,31,161,116,67,116,	0,1395,5756,9827,10031,19156,
#Partially deleted in new
chr8	43178118	43197025	chr8:43178118-43197025	0	+	43178118	43197025	789624	7	116,116,122,127,87,111,78,	0,4026,13355,14185,15638,18311,18829,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	43180288	43200555	chr8:43180288-43200555	1	+	43180575	43199569	789624	9	450,116,122,127,87,78,71,113,1168,	0,1856,11185,12015,13468,16659,17383,17551,19099,
#Partially deleted in new
chr8	43181646	43191580	chr8:43181646-43191580	0	+	43181646	43181646	8553170	2	614,107,	0,9827,
#Partially deleted in new
chr8	43182199	43194151	chr8:43182199-43194151	0	+	43182199	43182199	8553170	4	61,122,127,395,	0,9274,10104,11557,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	43195816	43197907	chr8:43195816-43197907	0	+	43195816	43195816	8553170	2	1926,68,	0,2023,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	43196167	43199858	chr8:43196167-43199858	0	+	43196167	43196167	8553170	4	858,71,113,471,	0,1504,1672,3220,
#Deleted in new
chr8	43219959	43220809	chr8:43219959-43220809	7	-	43219959	43219959	16724991	1	850,	0,
#Deleted in new
chr8	43246754	43246935	chr8:43246754-43246935	7	-	43246754	43246754	16724991	1	181,	0,
#Deleted in new
chr8	43247190	43247410	chr8:43247190-43247410	7	+	43247190	43247190	16724991	1	220,	0,
#Deleted in new
chr8	43251710	43251858	chr8:43251710-43251858	7	+	43251710	43251710	16724991	1	148,	0,
#Deleted in new
chr8	43253731	43254089	chr8:43253731-43254089	7	+	43253731	43253731	16724991	2	85,215,	0,143,
#Deleted in new
chr8	43270197	43271960	chr8:43270197-43271960	7	-	43270197	43270197	16724991	1	1763,	0,
#Deleted in new
chr8	43276269	43276823	chr8:43276269-43276823	7	-	43276269	43276269	16724991	1	554,	0,
#Deleted in new
chr8	43284625	43284806	chr8:43284625-43284806	7	-	43284625	43284625	16724991	1	181,	0,
#Partially deleted in new
chr8	43292482	43363518	chr8:43292482-43363518	3	+	43292484	43363319	789624	14	301,115,174,107,138,71,71,45,167,31,142,214,124,568,	0,4537,4803,8035,9490,12216,23408,24871,25973,49396,49704,64276,68560,70468,
#Partially deleted in new
chr8	43292482	43363319	chr8:43292482-43363319	1	+	43292484	43363319	789624	13	301,115,174,107,71,71,45,167,31,142,214,124,369,	0,4537,4803,8035,12216,23408,24871,25973,49396,49704,64276,68560,70468,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	43303375	43303482	chr8:43303375-43303482	3	+	43303375	43303375	8553170	1	107,	0,
#Deleted in new
chr8	43313947	43314200	chr8:43313947-43314200	7	+	43313947	43313947	16724991	1	253,	0,
#Partially deleted in new
chr8	43372558	43372677	chr8:43372558-43372677	7	+	43372558	43372558	16724991	1	119,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	43378296	43378510	chr8:43378296-43378510	3	+	43378296	43378296	8553170	1	214,	0,
#Partially deleted in new
chr8	43442901	43452912	chr8:43442901-43452912	7	+	43442901	43442901	16724991	5	180,68,100,182,113,	0,1446,5903,8554,9898,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	43493936	43494762	chr8:43493936-43494762	7	+	43493936	43493936	16724991	1	826,	0,
#Deleted in new
chr8	43511819	43512033	chr8:43511819-43512033	7	-	43511819	43511819	16724991	1	214,	0,
#Deleted in new
chr8	43513642	43514421	chr8:43513642-43514421	7	+	43513642	43513642	16724991	1	779,	0,
#Deleted in new
chr8	43539136	43539472	chr8:43539136-43539472	7	+	43539136	43539136	16724991	1	336,	0,
#Deleted in new
chr8	43539972	43540927	chr8:43539972-43540927	7	+	43539972	43539972	16724991	3	274,43,95,	0,612,860,
#Partially deleted in new
chr8	43542075	43544057	chr8:43542075-43544057	7	+	43542075	43542075	16724991	2	205,106,	0,1876,
#Deleted in new
chr8	43672822	43673075	chr8:43672822-43673075	7	+	43672822	43672822	16724991	1	253,	0,
#Deleted in new
chr8	43674269	43674591	chr8:43674269-43674591	7	-	43674269	43674269	16724991	1	322,	0,
#Deleted in new
chr8	46028803	46028892	chr8:46028803-46028892	3	-	46028803	46028803	8553170	1	89,	0,
#Partially deleted in new
chr8	46549088	46550802	chr8:46549088-46550802	7	+	46549088	46549088	16724991	2	280,192,	0,1522,
#Partially deleted in new
chr8	46579212	46614523	chr8:46579212-46614523	7	-	46579212	46579212	16724991	11	339,156,82,172,165,132,127,94,186,239,247,	0,869,10857,12124,12890,14242,15902,16474,16829,21223,35064,
#Partially deleted in new
chr8	46579212	46617319	chr8:46579212-46617319	5	-	46579212	46579212	16724991	8	339,156,127,94,186,258,36,156,	0,869,15902,16474,16829,35064,35926,37951,
#Partially deleted in new
chr8	46579212	46638886	chr8:46579212-46638886	5	-	46579212	46579212	16724991	7	339,156,172,132,127,186,552,	0,869,12124,14242,15902,16829,59122,
#Partially deleted in new
chr8	46579300	46617643	chr8:46579300-46617643	4	-	46579300	46579300	16724991	9	251,156,168,127,94,186,258,36,96,	0,781,14163,15814,16386,16741,34976,35838,38247,
#Deleted in new
chr8	46671838	46671926	chr8:46671838-46671926	7	+	46671838	46671838	16724991	1	88,	0,
#Deleted in new
chr8	46697629	46698688	chr8:46697629-46698688	7	+	46697629	46697629	16724991	3	81,156,210,	0,168,849,
#Partially deleted in new
chr8	46784799	46785928	chr8:46784799-46785928	7	+	46784799	46784799	16724991	1	1129,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	46792064	46793064	chr8:46792064-46793064	7	+	46792064	46792064	16724991	2	256,456,	0,544,
#Partially deleted in new
chr8	46822236	46848066	chr8:46822236-46848066	0	+	46822236	46822236	8553170	6	192,57,82,76,77,91,	0,14505,18808,20040,21113,25739,
#Partially deleted in new
chr8	46827227	46827894	chr8:46827227-46827894	7	-	46827227	46827227	16724991	1	667,	0,
#Partially deleted in new
chr8	46828116	46828413	chr8:46828116-46828413	7	-	46828116	46828116	16724991	1	297,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	46831049	46831156	chr8:46831049-46831156	3	+	46831049	46831049	8553170	1	107,	0,
#Deleted in new
chr8	46837577	46838706	chr8:46837577-46838706	7	-	46837577	46837577	16724991	1	1129,	0,
#Deleted in new
chr8	46838787	46839205	chr8:46838787-46839205	7	+	46838787	46838787	16724991	1	418,	0,
#Partially deleted in new
chr8	46840815	46848009	chr8:46840815-46848009	0	+	46840815	46840815	8553170	7	120,82,76,77,108,53,34,	0,229,1461,2534,3373,5213,7160,
#Partially deleted in new
chr8	46840874	46854307	chr8:46840874-46854307	3	+	46840874	46840874	5263520	9	61,82,76,77,53,125,747,76,201,	0,170,1402,2475,5154,7101,7909,9793,13232,
#Partially deleted in new
chr8	46840894	46854211	chr8:46840894-46854211	0	+	46840894	46840894	8553170	8	41,82,77,125,118,82,76,105,	0,150,2455,7081,7889,8554,9773,13212,
#Deleted in new
chr8	46870901	46872045	chr8:46870901-46872045	7	-	46870901	46870901	16724991	1	1144,	0,
#Partially deleted in new
chr8	46922560	46928832	chr8:46922560-46928832	3	+	46922560	46922560	8553170	2	408,197,	0,6075,
#Partially deleted in new
chr8	46930839	46934446	chr8:46930839-46934446	3	-	46930839	46930839	8553170	3	74,117,269,	0,480,3338,
#Deleted in new
chr8	46972475	46974617	chr8:46972475-46974617	7	-	46972475	46972475	16724991	1	2142,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	47068020	47068323	chr8:47068020-47068323	3	-	47068020	47068020	8553170	1	303,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	47089571	47198861	chr8:47089571-47198861	7	-	47089571	47089571	16724991	10	213,98,264,142,31,167,45,125,285,104,	0,1137,11357,20838,21597,32635,33845,35276,40680,109186,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	47129261	47132628	chr8:47129261-47132628	3	+	47129261	47129261	8553170	3	133,58,765,	0,781,2602,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	47131780	47131887	chr8:47131780-47131887	3	-	47131780	47131780	8553170	1	107,	0,
#Partially deleted in new
chr8	47157117	47157771	chr8:47157117-47157771	7	+	47157117	47157117	16724991	1	654,	0,
#Partially deleted in new
chr8	47164869	47165524	chr8:47164869-47165524	7	+	47164869	47164869	16724991	2	238,105,	0,550,
#Deleted in new
chr8	47189304	47189560	chr8:47189304-47189560	7	+	47189304	47189304	16724991	1	256,	0,
#Deleted in new
chr8	47190771	47193262	chr8:47190771-47193262	3	+	47190771	47190771	8553170	1	2491,	0,
#Deleted in new
chr8	47194001	47194347	chr8:47194001-47194347	7	-	47194001	47194001	16724991	1	346,	0,
#Deleted in new
chr8	47198031	47198323	chr8:47198031-47198323	7	-	47198031	47198031	16724991	1	292,	0,
#Deleted in new
chr8	47202443	47202897	chr8:47202443-47202897	7	-	47202443	47202443	16724991	2	306,46,	0,408,
#Partially deleted in new
chr8	47260574	47736306	chr8:47260574-47736306	3	+	47260958	47735450	789624	20	417,156,67,105,164,251,101,220,196,251,141,88,144,60,211,153,94,115,54,1000,	0,19287,23453,30458,33292,135801,147286,179748,335236,338371,413226,439828,441146,441381,452087,452914,466625,468358,468837,474732,
#Partially deleted in new
chr8	47260877	47735999	chr8:47260877-47735999	1	+	47279971	47735450	789624	19	114,156,105,164,251,101,220,196,251,141,88,144,60,211,153,94,115,54,693,	0,18984,30155,32989,135498,146983,179445,334933,338068,412923,439525,440843,441078,451784,452611,466322,468055,468534,474429,
#Partially deleted in new
chr8	47260912	47408006	chr8:47260912-47408006	0	+	47260958	47279968	789624	6	79,154,67,105,251,146,	0,18951,23115,30120,135463,146948,
#Partially deleted in new
chr8	47260930	47735529	chr8:47260930-47735529	1	+	47279971	47735512	789624	19	61,119,67,105,164,251,101,220,196,251,141,88,144,60,211,153,94,170,223,	0,18931,23097,30102,32936,135445,146930,179392,334880,338015,412870,439472,440790,441025,451731,452558,466269,468002,474376,
#Partially deleted in new
chr8	47260935	47388484	chr8:47260935-47388484	0	+	47260935	47260935	8553170	6	56,156,67,105,164,144,	0,18926,23092,30097,32931,127405,
#Partially deleted in new
chr8	47260941	47440542	chr8:47260941-47440542	0	+	47260958	47396413	789624	6	50,156,67,105,251,220,	0,18920,23086,30091,135434,179381,
#Partially deleted in new
chr8	47260941	47713091	chr8:47260941-47713091	0	+	47260941	47260941	8553170	11	50,105,164,220,196,251,141,88,144,60,430,	0,30091,32925,179381,334869,338004,412859,439461,440779,441014,451720,
#Partially deleted in new
chr8	47260952	47735913	chr8:47260952-47735913	0	+	47260958	47440343	789624	17	39,156,67,105,164,220,196,141,88,144,60,211,153,94,115,54,607,	0,18909,23075,30080,32914,179370,334858,412848,439450,440768,441003,451709,452536,466247,467980,468459,474354,
#Partially deleted in new
chr8	47260954	47599035	chr8:47260954-47599035	0	+	47260958	47440343	789624	8	37,156,67,105,164,220,196,90,	0,18907,23073,30078,32912,179368,334856,337991,
#Partially deleted in new
chr8	47260954	47713441	chr8:47260954-47713441	0	+	47260954	47260954	8553170	15	37,156,67,105,164,251,101,220,196,251,141,88,144,60,780,	0,18907,23073,30078,32912,135421,146906,179368,334856,337991,412846,439448,440766,441001,451707,
#Partially deleted in new
chr8	47260955	47735511	chr8:47260955-47735511	0	+	47260958	47291074	789624	19	36,156,105,164,251,101,220,196,251,141,88,144,60,211,153,94,115,54,205,	0,18906,30077,32911,135420,146905,179367,334855,337990,412845,439447,440765,441000,451706,452533,466244,467977,468456,474351,
#Partially deleted in new
chr8	47260955	47595984	chr8:47260955-47595984	0	+	47260958	47440326	789624	8	36,156,67,105,164,101,220,174,	0,18906,23072,30077,32911,146905,179367,334855,
#Partially deleted in new
chr8	47260964	47599043	chr8:47260964-47599043	0	+	47440378	47599043	789624	8	27,156,67,105,101,220,196,98,	0,18897,23063,30068,146896,179358,334846,337981,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr8	47276832	47735911	chr8:47276832-47735911	0	+	47276832	47276832	8553170	21	239,167,156,67,105,164,251,101,220,196,251,141,83,144,60,211,153,94,115,54,605,	0,2437,3029,7195,14200,17034,119543,131028,163490,318978,322113,396968,423575,424888,425123,435829,436656,450367,452100,452579,458474,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	47291052	47294428	chr8:47291052-47294428	0	+	47291052	47291052	8553170	2	85,562,	0,2814,
#Partially deleted in new
chr8	47360818	47440397	chr8:47360818-47440397	0	+	47360818	47360818	8553170	4	131,251,101,75,	0,35557,47042,79504,
#Partially deleted in new
chr8	47440400	47735916	chr8:47440400-47735916	0	+	47440400	47735319	789624	11	142,196,251,141,88,144,60,211,153,94,610,	0,155410,158545,233400,260002,261320,261555,272261,273088,286799,294906,
#Deleted in new
chr8	47511033	47512141	chr8:47511033-47512141	7	-	47511033	47511033	16724991	1	1108,	0,
#Deleted in new
chr8	47527396	47528148	chr8:47527396-47528148	3	+	47527396	47527396	8553170	1	752,	0,
#Partially deleted in new
chr8	47546803	47547926	chr8:47546803-47547926	7	-	47546803	47546803	16724991	2	603,176,	0,947,
#Deleted in new
chr8	47592146	47592609	chr8:47592146-47592609	7	-	47592146	47592146	16724991	1	463,	0,
#Partially deleted in new
chr8	47654087	47735883	chr8:47654087-47735883	0	+	47654087	47654087	8553170	11	62,141,88,144,60,211,153,94,115,54,577,	0,19713,46315,47633,47868,58574,59401,73112,74845,75324,81219,
#Partially deleted in new
chr8	47659663	47735911	chr8:47659663-47735911	1	+	47673831	47735450	789624	13	27,70,86,141,88,144,60,211,153,94,115,54,605,	0,781,1254,14137,40739,42057,42292,52998,53825,67536,69269,69748,75643,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	47667770	47667877	chr8:47667770-47667877	3	+	47667770	47667770	8553170	1	107,	0,
#Partially deleted in new
chr8	47673532	47735785	chr8:47673532-47735785	0	+	47673532	47673532	8553170	10	409,88,144,60,211,153,94,115,54,479,	0,26870,28188,28423,39129,39956,53667,55400,55879,61774,
#Partially deleted in new
chr8	47688441	47713644	chr8:47688441-47713644	0	+	47688441	47688441	8553170	6	101,88,144,60,211,156,	0,11961,13279,13514,24220,25047,
#Partially deleted in new
chr8	47697755	47713533	chr8:47697755-47713533	0	+	47697755	47697755	8553170	6	178,88,144,60,211,45,	0,2647,3965,4200,14906,15733,
#Partially deleted in new
chr8	47727195	47735374	chr8:47727195-47735374	0	+	47727252	47735374	789624	4	98,115,54,68,	0,1737,2216,8111,
#Partially deleted in new
chr8	47727252	47735513	chr8:47727252-47735513	1	+	47727252	47735319	789624	5	41,115,54,65,207,	0,1680,2159,4876,8054,
#Deleted in new
chr8	47728719	47729704	chr8:47728719-47729704	0	+	47728719	47728719	8553170	2	328,293,	0,692,
#Partially deleted in new
chr8	47732558	47735327	chr8:47732558-47735327	0	+	47732558	47732558	8553170	2	143,21,	0,2748,
#Deleted in new
chr8	47736908	47739086	chr8:47736908-47739086	3	-	47737310	47738120	789624	1	2178,	0,
#Partially deleted in new
chr8	47773107	47960183	chr8:47773107-47960183	3	-	47774172	47960126	0	86	1270,140,189,202,72,90,93,221,68,205,144,88,212,161,181,194,175,190,112,109,225,189,139,206,180,132,113,201,190,208,99,174,150,125,112,132,152,144,120,138,149,73,66,169,179,208,128,168,105,186,204,159,133,209,224,249,134,100,95,227,108,153,164,91,107,160,120,87,160,116,153,126,50,169,165,147,158,31,56,100,113,109,75,93,77,211,	0,3736,4578,5351,5620,5896,9054,9270,10634,12005,15798,16043,21182,25129,26102,27685,30198,34029,44342,46294,47611,48496,50750,53548,55060,57497,58706,61088,63230,64104,66040,66908,76046,76271,79565,80975,82114,84048,85408,85741,86503,87791,88954,89265,90291,91448,104616,106383,108308,108804,112836,114439,115410,115906,117149,120031,124053,125362,127265,129461,131761,139302,140793,142220,145169,154086,154663,155984,156745,157564,159912,160857,161901,162624,163245,166443,170101,170745,170866,180512,180699,181230,182766,184063,184247,186865,
#Partially deleted in new
chr8	47773734	47960178	chr8:47773734-47960178	1	-	47774172	47960126	0	85	643,140,189,202,72,90,221,68,205,144,88,212,161,181,194,175,190,112,109,225,189,139,206,180,132,113,201,190,208,99,174,150,125,112,132,152,144,120,138,149,73,66,169,179,208,128,168,105,186,204,159,133,209,224,249,134,100,95,227,108,153,164,91,107,160,120,87,160,116,153,126,50,169,165,147,158,31,56,100,113,109,75,93,77,206,	0,3109,3951,4724,4993,5269,8643,10007,11378,15171,15416,20555,24502,25475,27058,29571,33402,43715,45667,46984,47869,50123,52921,54433,56870,58079,60461,62603,63477,65413,66281,75419,75644,78938,80348,81487,83421,84781,85114,85876,87164,88327,88638,89664,90821,103989,105756,107681,108177,112209,113812,114783,115279,116522,119404,123426,124735,126638,128834,131134,138675,140166,141593,144542,153459,154036,155357,156118,156937,159285,160230,161274,161997,162618,165816,169474,170118,170239,179885,180072,180603,182139,183436,183620,186238,
#Partially deleted in new
chr8	47773986	47778537	chr8:47773986-47778537	0	-	47774374	47778537	789624	3	391,189,79,	0,3699,4472,
#Partially deleted in new
chr8	47774133	47778719	chr8:47774133-47778719	0	-	47774133	47774133	8553170	4	244,140,189,261,	0,2710,3552,4325,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	47778458	47783007	chr8:47778458-47783007	0	-	47778458	47778458	8553170	5	202,72,90,93,630,	0,269,545,3703,3919,
#Partially deleted in new
chr8	47778536	47779361	chr8:47778536-47779361	0	-	47778536	47778536	8553170	3	124,72,358,	0,191,467,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	47782413	47784139	chr8:47782413-47784139	0	-	47782413	47782413	8553170	2	185,398,	0,1328,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	47805078	47805179	chr8:47805078-47805179	3	-	47805078	47805078	8553170	1	101,	0,
#Deleted in new
chr8	47862368	47864792	chr8:47862368-47864792	0	-	47862368	47862368	8553170	3	173,179,237,	0,1030,2187,
#Partially deleted in new
chr8	47926832	47929169	chr8:47926832-47929169	0	-	47926832	47926832	8553170	3	521,120,78,	0,938,2259,
#Partially deleted in new
chr8	47936453	47939950	chr8:47936453-47939950	0	-	47936453	47936453	8553170	2	64,400,	0,3097,
#Partially deleted in new
chr8	47954349	47959309	chr8:47954349-47959309	0	-	47954349	47957209	789624	5	97,75,93,77,195,	0,1524,2821,3005,4765,
#Partially deleted in new
chr8	47960184	47962327	chr8:47960184-47962327	0	+	47961144	47962327	789624	5	136,84,165,164,23,	0,946,1331,1868,2120,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr8	47960897	47978160	chr8:47960897-47978160	3	+	47961144	47976778	789624	17	117,84,165,164,102,96,96,139,221,121,260,366,128,208,229,134,1475,	0,233,618,1155,1407,1866,2047,3676,5289,6467,8900,9613,10443,11959,13836,14817,15788,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr8	47960897	47977016	chr8:47960897-47977016	1	+	47961144	47976778	8553170	15	117,84,165,164,102,96,96,139,221,121,260,366,128,208,331,	0,233,618,1155,1407,1866,2047,3676,5289,6467,8900,9613,10443,11959,15788,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr8	47960898	47977097	chr8:47960898-47977097	1	+	47961595	47976778	8553170	16	116,165,164,102,96,96,139,221,121,260,366,128,208,229,134,412,	0,617,1154,1406,1865,2046,3675,5288,6466,8899,9612,10442,11958,13835,14816,15787,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr8	47960935	47978160	chr8:47960935-47978160	1	+	47961144	47976778	789624	16	279,165,164,102,96,96,139,221,121,260,366,128,208,229,134,1475,	0,580,1117,1369,1828,2009,3638,5251,6429,8862,9575,10405,11921,13798,14779,15750,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr8	47960940	47978160	chr8:47960940-47978160	1	+	47961144	47976778	8553170	17	74,84,165,164,102,96,96,139,221,121,260,366,128,208,229,134,1475,	0,190,575,1112,1364,1823,2004,3633,5246,6424,8857,9570,10400,11916,13793,14774,15745,
#Deleted in new
chr8	47960948	47961586	chr8:47960948-47961586	0	+	47960948	47960948	8553170	2	66,456,	0,182,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr8	47960951	47977123	chr8:47960951-47977123	0	+	47961144	47962088	8553170	17	63,296,165,164,102,96,96,139,221,121,260,366,128,208,229,134,438,	0,179,564,1101,1353,1812,1993,3622,5235,6413,8846,9559,10389,11905,13782,14763,15734,
#Deleted in new
chr8	47960957	47962406	chr8:47960957-47962406	0	+	47961144	47962088	789624	5	57,84,165,139,102,	0,173,558,1120,1347,
#Partially deleted in new
chr8	47961137	47976920	chr8:47961137-47976920	1	+	47961144	47976778	8553170	14	77,165,164,102,96,96,139,260,366,128,208,229,134,235,	0,378,915,1167,1626,1807,3436,8660,9373,10203,11719,13596,14577,15548,
#Partially deleted in new
chr8	47961496	47964665	chr8:47961496-47964665	0	+	47961496	47961496	8553170	6	184,164,102,96,96,92,	0,556,808,1267,1448,3077,
#Partially deleted in new
chr8	47961856	47966320	chr8:47961856-47966320	0	+	47961856	47961856	8553170	6	360,102,96,96,139,134,	0,448,907,1088,2717,4330,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	47962848	47977003	chr8:47962848-47977003	0	+	47962848	47967441	8553170	8	11,96,139,121,208,229,134,318,	0,96,1725,4516,10008,11885,12866,13837,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	47964591	47977010	chr8:47964591-47977010	0	+	47964591	47976778	789624	10	121,89,121,260,366,128,208,229,134,325,	0,1595,2773,5206,5919,6749,8265,10142,11123,12094,
#Partially deleted in new
chr8	47967450	47973056	chr8:47967450-47973056	0	+	47967450	47967450	8553170	2	35,200,	0,5406,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	47969024	47970735	chr8:47969024-47970735	0	+	47969024	47969024	8553170	3	377,260,225,	0,773,1486,
#Deleted in new
chr8	47969685	47971444	chr8:47969685-47971444	0	+	47969685	47969685	8553170	3	372,366,104,	0,825,1655,
#Deleted in new
chr8	47969940	47971463	chr8:47969940-47971463	0	+	47969940	47971133	8553170	4	117,366,149,123,	0,570,1100,1400,
#Deleted in new
chr8	47970508	47971470	chr8:47970508-47971470	0	+	47970508	47970508	8553170	2	368,130,	0,832,
#Partially deleted in new
chr8	47971323	47973065	chr8:47971323-47973065	0	+	47971323	47971323	8553170	2	145,209,	0,1533,
#Partially deleted in new
chr8	47971431	47975835	chr8:47971431-47975835	0	+	47971431	47974800	789624	3	37,208,121,	0,3323,4283,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	47973691	47975785	chr8:47973691-47975785	0	+	47973691	47973691	8553170	2	1271,71,	0,2023,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	47975297	47977259	chr8:47975297-47977259	0	+	47975297	47975297	8553170	2	551,574,	0,1388,
#Deleted in new
chr8	47977292	47978160	chr8:47977292-47978160	0	+	47977292	47977292	8553170	2	309,424,	0,444,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	47979413	47979521	chr8:47979413-47979521	3	+	47979413	47979413	8553170	1	108,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	48008399	48064708	chr8:48008399-48064708	3	+	48008454	48060828	0	4	71,149,126,4027,	0,34633,41453,52282,
#Partially deleted in new
chr8	48008414	48061417	chr8:48008414-48061417	0	+	48008414	48060828	789624	3	56,126,736,	0,41438,52267,
#Partially deleted in new
chr8	48008418	48061480	chr8:48008418-48061480	1	+	48043136	48060828	789624	5	52,196,149,126,799,	0,26447,34614,41434,52263,
#Partially deleted in new
chr8	48008450	48060897	chr8:48008450-48060897	1	+	48043136	48060828	789624	4	121,149,126,216,	0,34582,41402,52231,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	48041746	48061570	chr8:48041746-48061570	1	+	48043136	48060828	789624	3	1435,126,889,	0,8106,18935,
#Partially deleted in new
chr8	48043032	48060903	chr8:48043032-48060903	0	+	48043032	48043507	789624	4	149,128,126,222,	0,466,6820,17649,
#Partially deleted in new
chr8	48049579	48061315	chr8:48049579-48061315	0	+	48049579	48049579	8553170	2	399,634,	0,11102,
#Partially deleted in new
chr8	48193849	48194627	chr8:48193849-48194627	7	-	48193849	48193849	16724991	1	778,	0,
#Deleted in new
chr8	48294025	48294694	chr8:48294025-48294694	7	-	48294025	48294025	16724991	1	669,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	48307926	48308030	chr8:48307926-48308030	3	-	48307926	48307926	8553170	1	104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	48316668	48316770	chr8:48316668-48316770	3	+	48316668	48316668	8553170	1	102,	0,
#Deleted in new
chr8	48384589	48385049	chr8:48384589-48385049	7	+	48384589	48384589	16724991	1	460,	0,
#Deleted in new
chr8	48428142	48431041	chr8:48428142-48431041	3	-	48428142	48428142	8553170	1	2899,	0,
#Deleted in new
chr8	48515851	48517089	chr8:48515851-48517089	3	-	48515851	48515851	8553170	2	505,32,	0,1206,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	48551526	48556392	chr8:48551526-48556392	3	-	48551526	48551526	8553170	5	1030,65,131,131,173,	0,1187,2890,3738,4693,
#Partially deleted in new
chr8	48551566	48698510	chr8:48551566-48698510	3	+	48551566	48551566	789624	4	99,257,63,1953,	0,249,143857,144991,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	48552014	48556441	chr8:48552014-48556441	0	-	48552014	48552014	8553170	2	542,222,	0,4205,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	48590400	48594621	chr8:48590400-48594621	3	+	48590400	48590400	8553170	2	298,3251,	0,970,
#Partially deleted in new
chr8	48597457	48621018	chr8:48597457-48621018	3	-	48597457	48597457	8553170	4	61,125,122,251,	0,3154,4650,23310,
#Partially deleted in new
chr8	48620464	48623895	chr8:48620464-48623895	3	+	48620464	48620464	789624	2	65,224,	0,3207,
#Deleted in new
chr8	48657259	48658894	chr8:48657259-48658894	3	-	48657259	48657259	8553170	2	429,165,	0,1470,
#Partially deleted in new
chr8	48710788	48735234	chr8:48710788-48735234	0	-	48710788	48710788	789624	5	1073,226,71,150,141,	0,1415,18253,23746,24305,
#Partially deleted in new
chr8	48713633	48729789	chr8:48713633-48729789	0	-	48724741	48729789	789624	4	352,86,105,70,	0,11082,15408,16086,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	48714914	48735311	chr8:48714914-48735311	1	-	48724741	48735151	789624	6	1620,86,105,152,105,218,	0,9801,14127,14805,15625,20179,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	48716223	48735301	chr8:48716223-48735301	0	-	48729822	48735151	789624	6	311,86,105,105,105,208,	0,8492,12818,13496,14316,18870,
#Partially deleted in new
chr8	48723407	48735232	chr8:48723407-48735232	3	-	48724741	48735151	789624	6	1394,105,152,105,156,139,	0,5634,6312,7132,7940,11686,
#Partially deleted in new
chr8	48724409	48730610	chr8:48724409-48730610	0	-	48724741	48730610	789624	5	225,86,105,152,71,	0,306,4632,5310,6130,
#Partially deleted in new
chr8	48724690	48735268	chr8:48724690-48735268	1	-	48724741	48735151	789624	5	111,105,152,105,175,	0,4351,5029,5849,10403,
#Partially deleted in new
chr8	48724736	48730125	chr8:48724736-48730125	0	-	48724736	48724736	8553170	3	65,105,406,	0,4305,4983,
#Partially deleted in new
chr8	48729763	48735311	chr8:48729763-48735311	0	-	48729763	48729763	8553170	4	108,105,150,218,	0,776,4771,5330,
#Partially deleted in new
chr8	48913915	48914380	chr8:48913915-48914380	7	+	48913915	48913915	16724991	1	465,	0,
#Deleted in new
chr8	48917603	48921683	chr8:48917603-48921683	3	-	48918806	48921265	789624	3	1385,546,497,	0,2292,3583,
#Deleted in new
chr8	48917767	48921429	chr8:48917767-48921429	1	-	48918806	48921265	789624	3	1221,546,243,	0,2128,3419,
#Deleted in new
chr8	48917867	48921440	chr8:48917867-48921440	0	-	48917867	48917867	8553170	2	2574,254,	0,3319,
#Deleted in new
chr8	48920252	48921740	chr8:48920252-48921740	0	-	48920252	48921265	789624	3	189,343,94,	0,934,1394,
#Deleted in new
chr8	49072340	49075471	chr8:49072340-49075471	1	+	49072830	49075173	789624	5	142,99,78,100,320,	0,446,1718,1893,2811,
#Deleted in new
chr8	49072343	49076090	chr8:49072343-49076090	3	+	49072830	49075247	789624	5	139,99,78,100,856,	0,443,1715,1890,2891,
#Deleted in new
chr8	49072353	49075602	chr8:49072353-49075602	1	+	49072830	49074531	789624	5	129,99,78,100,1093,	0,433,1705,1880,2156,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	49168538	49228925	chr8:49168538-49228925	3	+	49168538	49168538	8553170	4	271,113,81,368,	0,56399,59601,60019,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	49168681	49225029	chr8:49168681-49225029	0	+	49168681	49168681	8553170	3	128,89,89,	0,24425,56259,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	49330209	49330547	chr8:49330209-49330547	3	+	49330209	49330209	8553170	1	338,	0,
#Deleted in new
chr8	49352629	49352844	chr8:49352629-49352844	7	-	49352629	49352629	16724991	1	215,	0,
#Partially deleted in new
chr8	49496762	49512180	chr8:49496762-49512180	3	-	49496762	49496762	789624	2	213,54,	0,15364,
#Deleted in new
chr8	49740215	49741321	chr8:49740215-49741321	7	-	49740215	49740215	16724991	1	1106,	0,
#Partially deleted in new
chr8	49817585	49820944	chr8:49817585-49820944	3	-	49817585	49817585	8553170	3	236,162,14,	0,1692,3345,
#Deleted in new
chr8	49906862	49907446	chr8:49906862-49907446	3	-	49906862	49906862	8553170	1	584,	0,
#Partially deleted in new
chr8	49909788	50792829	chr8:49909788-50792829	1	+	50394238	50792829	789624	20	116,153,75,54,135,57,58,44,42,103,83,131,130,39,117,72,153,93,111,159,	0,1103,262772,484423,492421,528754,539879,540767,540899,592989,620388,626889,643261,681090,747120,748803,794811,799097,842212,882882,
#Deleted in new
chr8	49909803	49911583	chr8:49909803-49911583	0	+	49909803	49909803	8553170	3	101,153,163,	0,1088,1617,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	49910948	50163969	chr8:49910948-50163969	0	+	49910948	49910948	8553170	2	96,471,	0,252550,
#Partially deleted in new
chr8	49910966	50793650	chr8:49910966-50793650	0	+	50394238	50536679	789624	15	1265,75,54,135,103,131,130,138,39,117,72,153,93,111,980,	0,261594,483245,491243,591811,625711,642083,657915,679912,745942,747625,793633,797919,841034,881704,
#Partially deleted in new
chr8	49911406	50796691	chr8:49911406-50796691	3	+	50394238	50792829	789624	19	825,75,54,135,57,58,44,42,103,83,131,130,39,117,72,153,93,111,4021,	0,261154,482805,490803,527136,538261,539149,539281,591371,618770,625271,641643,679472,745502,747185,793193,797479,840594,881264,
#Partially deleted in new
chr8	49911603	50792862	chr8:49911603-50792862	1	+	50394238	50792829	789624	18	628,75,54,57,58,44,42,103,83,131,130,39,117,72,153,93,111,192,	0,260957,482608,526939,538064,538952,539084,591174,618573,625074,641446,679275,745305,746988,792996,797282,840397,881067,
#Partially deleted in new
chr8	49911633	50795951	chr8:49911633-50795951	1	+	50394238	50792829	789624	15	598,75,54,135,57,58,44,42,39,117,72,153,93,111,3281,	0,260927,482578,490576,526909,538034,538922,539054,679245,745275,746958,792966,797252,840367,881037,
#Partially deleted in new
chr8	49911658	50792863	chr8:49911658-50792863	0	+	50394238	50449684	789624	21	573,75,54,115,57,58,44,42,103,83,131,130,138,57,39,117,72,148,93,111,193,	0,260902,482553,490551,526884,538009,538897,539029,591119,618518,625019,641391,657223,664009,679220,745250,746933,792946,797227,840342,881012,
#Partially deleted in new
chr8	49911668	50709160	chr8:49911668-50709160	1	+	50394238	50709002	789624	16	563,75,54,135,58,44,42,103,83,131,130,39,117,72,153,275,	0,260892,482543,490541,537999,538887,539019,591109,618508,625009,641381,679210,745240,746923,792931,797217,
#Partially deleted in new
chr8	49911672	50794118	chr8:49911672-50794118	1	+	50394238	50792829	789624	19	559,75,54,135,57,58,44,42,103,83,131,130,39,117,72,153,93,111,1448,	0,260888,482539,490537,526870,537995,538883,539015,591105,618504,625005,641377,679206,745236,746919,792927,797213,840328,880998,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr8	49911697	50709171	chr8:49911697-50709171	1	+	50394238	50707913	789624	17	534,75,54,135,57,58,44,42,103,83,131,130,39,117,72,153,1276,	0,260863,482514,490512,526845,537970,538858,538990,591080,618479,624980,641352,679181,745211,746894,792902,796198,
#Partially deleted in new
chr8	49911703	50458174	chr8:49911703-50458174	0	+	49911703	49911703	8553170	10	528,75,54,135,57,58,44,42,59,264,	0,260857,482508,490506,526839,537964,538852,538984,545318,546207,
#Partially deleted in new
chr8	49911778	50796397	chr8:49911778-50796397	1	+	50394238	50792829	789624	6	453,75,54,135,111,3727,	0,260782,482433,490431,840222,880892,
#Partially deleted in new
chr8	49911837	50709091	chr8:49911837-50709091	1	+	50394238	50709002	789624	11	394,54,103,83,131,130,39,117,72,153,206,	0,482374,590940,618339,624840,641212,679041,745071,746754,792762,797048,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr8	49911879	50793090	chr8:49911879-50793090	0	+	50394238	50590909	789624	19	352,75,54,135,57,58,44,42,103,83,131,39,117,72,153,93,62,111,420,	0,260681,482332,490330,526663,537788,538676,538808,590898,618297,624798,678999,745029,746712,792720,797006,835894,840121,880791,
#Partially deleted in new
chr8	49911919	50793155	chr8:49911919-50793155	0	+	50394238	50536679	789624	18	312,75,54,135,57,58,44,42,103,131,130,39,117,72,153,93,111,485,	0,260641,482292,490290,526623,537748,538636,538768,590858,624758,641130,678959,744989,746672,792680,796966,840081,880751,
#Partially deleted in new
chr8	49912036	50792867	chr8:49912036-50792867	1	+	50394238	50792829	789624	17	195,54,135,57,58,44,42,103,83,131,130,39,117,72,153,93,197,	0,482175,490173,526506,537631,538519,538651,590741,618140,624641,641013,678842,744872,746555,792563,796849,880634,
#Partially deleted in new
chr8	49912057	50792829	chr8:49912057-50792829	1	+	50394238	50792829	789624	16	174,75,54,135,57,58,44,42,103,83,131,130,39,117,72,159,	0,260503,482154,490152,526485,537610,538498,538630,590720,618119,624620,640992,678821,744851,746534,880613,
#Partially deleted in new
chr8	49912144	50449725	chr8:49912144-50449725	0	+	50394238	50449725	789624	7	87,82,75,54,135,57,58,	0,99631,260416,482067,490065,526398,537523,
#Partially deleted in new
chr8	49912175	50286853	chr8:49912175-50286853	0	+	49912175	49912175	8553170	4	56,49,75,316,	0,2798,260385,374362,
#Partially deleted in new
chr8	50164130	50796632	chr8:50164130-50796632	1	+	50394238	50792829	789624	16	290,75,54,135,57,58,44,42,103,83,131,130,153,93,111,3962,	0,8430,230081,238079,274412,285537,286425,286557,338647,366046,372547,388919,540469,544755,587870,628540,
#Partially deleted in new
chr8	50164132	50709171	chr8:50164132-50709171	1	+	50394238	50709002	789624	17	288,75,54,135,57,58,44,42,103,83,131,130,39,117,72,153,286,	0,8428,230079,238077,274410,285535,286423,286555,338645,366044,372545,388917,426746,492776,494459,540467,544753,
#Partially deleted in new
chr8	50172560	50792861	chr8:50172560-50792861	0	+	50394238	50704582	789624	18	75,54,135,57,58,44,42,103,83,131,130,39,117,72,179,93,111,191,	0,221651,229649,265982,277107,277995,278127,330217,357616,364117,380489,418318,484348,486031,532013,536325,579440,620110,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	50381014	50382275	chr8:50381014-50382275	3	+	50381014	50381014	8553170	2	64,370,	0,891,
#Deleted in new
chr8	50490794	50491465	chr8:50490794-50491465	7	+	50490794	50490794	16724991	1	671,	0,
#Partially deleted in new
chr8	50553049	50709183	chr8:50553049-50709183	0	+	50553049	50704607	789624	6	130,39,117,72,148,298,	0,37829,103859,105542,151555,155836,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	50643840	50792829	chr8:50643840-50792829	1	+	50656917	50792829	789624	5	616,117,72,111,159,	0,13068,14751,108160,148830,
#Partially deleted in new
chr8	50762459	50762798	chr8:50762459-50762798	7	-	50762459	50762459	16724991	1	339,	0,
#Partially deleted in new
chr8	50859529	50860062	chr8:50859529-50860062	7	+	50859529	50859529	16724991	1	533,	0,
#Partially deleted in new
chr8	51015020	51015165	chr8:51015020-51015165	3	+	51015020	51015020	8553170	1	145,	0,
#Partially deleted in new
chr8	51257687	51321118	chr8:51257687-51321118	3	+	51257687	51257687	8553170	2	120,399,	0,63032,
#Partially deleted in new
chr8	51319577	51409421	chr8:51319577-51409421	0	-	51320847	51409421	789624	5	445,114,209,135,1355,	0,1206,52295,55019,88489,
#Partially deleted in new
chr8	51319578	51809445	chr8:51319578-51809445	3	-	51319890	51809344	789624	23	444,114,130,115,209,135,1495,158,109,157,113,159,117,267,170,118,170,72,72,72,72,72,265,	0,1205,20045,26254,52294,55018,88488,91671,93571,103996,107067,127425,129423,133940,137919,152608,155393,164064,180120,237261,273048,335110,489602,
#Partially deleted in new
chr8	51319578	51408979	chr8:51319578-51408979	0	-	51319890	51408979	789624	6	444,114,130,115,209,913,	0,1205,20045,26254,52294,88488,
#Partially deleted in new
chr8	51319930	51340185	chr8:51319930-51340185	0	-	51319930	51319930	8553170	3	92,114,562,	0,853,19693,
#Deleted in new
chr8	51435601	51436509	chr8:51435601-51436509	7	+	51435601	51435601	16724991	1	908,	0,
#Deleted in new
chr8	51721669	51722164	chr8:51721669-51722164	7	-	51721669	51721669	16724991	1	495,	0,
#Deleted in new
chr8	51810109	51810681	chr8:51810109-51810681	3	-	51810109	51810109	8553170	1	572,	0,
#Partially deleted in new
chr8	51817574	51899186	chr8:51817574-51899186	1	-	51820350	51899111	789624	4	3144,124,172,257,	0,13869,15943,81355,
#Partially deleted in new
chr8	51817579	51899098	chr8:51817579-51899098	3	-	51820350	51861151	789624	7	3139,124,172,103,402,143,169,	0,13864,15938,28081,43265,52668,81350,
#Partially deleted in new
chr8	51820146	51898970	chr8:51820146-51898970	0	-	51820146	51820146	8553170	6	572,124,172,192,103,41,	0,11297,13371,19300,25514,78783,
#Partially deleted in new
chr8	51820339	51899036	chr8:51820339-51899036	1	-	51820350	51861151	789624	6	379,124,172,103,402,107,	0,11104,13178,25321,40505,78590,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	51826928	51845745	chr8:51826928-51845745	0	-	51827350	51845745	789624	4	433,124,172,85,	0,4515,6589,18732,
#Partially deleted in new
chr8	51844808	51860884	chr8:51844808-51860884	0	-	51844808	51844808	8553170	2	955,40,	0,16036,
#Partially deleted in new
chr8	51848944	51899113	chr8:51848944-51899113	1	-	51850059	51861151	789624	3	1142,386,184,	0,11916,49985,
#Partially deleted in new
chr8	51860485	51899024	chr8:51860485-51899024	0	-	51860485	51860485	8553170	2	761,95,	0,38444,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	51899324	51946605	chr8:51899324-51946605	1	+	51899324	51899324	8553170	3	522,124,170,	0,13732,47111,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	51899648	51947173	chr8:51899648-51947173	3	+	51899648	51899648	8553170	2	198,738,	0,46787,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	51899714	51913138	chr8:51899714-51913138	1	+	51899714	51899714	8553170	2	493,82,	0,13342,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	51899733	51911729	chr8:51899733-51911729	0	+	51899733	51899733	8553170	2	113,310,	0,11686,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	51950283	51950690	chr8:51950283-51950690	3	+	51950283	51950283	8553170	1	407,	0,
#Partially deleted in new
chr8	51961457	52022974	chr8:51961457-52022974	3	+	51961457	51961457	8553170	2	113,559,	0,60958,
#Partially deleted in new
chr8	51996209	52008355	chr8:51996209-52008355	3	-	51996209	51996209	8553170	2	58,412,	0,11734,
#Partially deleted in new
chr8	52110838	52409743	chr8:52110838-52409743	3	-	52113197	52214257	0	26	2500,144,104,89,222,81,63,69,63,116,246,212,194,105,91,135,792,191,31,88,156,108,154,46,125,62,	0,5436,7499,15213,21119,22218,22400,25751,26582,32091,38893,48059,50536,53147,54296,56013,60953,69283,101240,103364,106907,109902,110801,119193,298489,298843,
#Partially deleted in new
chr8	52112543	52217821	chr8:52112543-52217821	0	-	52172571	52214257	789624	21	795,144,104,89,222,81,63,69,63,116,246,212,194,105,91,135,792,187,31,55,76,	0,3731,5794,13508,19414,20513,20695,24046,24877,30386,37188,46354,48831,51442,52591,54308,59248,67582,99535,101659,105202,
#Partially deleted in new
chr8	52112543	52217822	chr8:52112543-52217822	0	-	52210077	52214257	789624	22	795,144,104,89,222,81,63,69,63,116,246,212,194,105,91,135,792,191,88,31,55,77,	0,3731,5794,13508,19414,20513,20695,24046,24877,30386,37188,46354,48831,51442,52591,54308,59248,67578,97486,99535,101659,105202,
#Partially deleted in new
chr8	52112545	52217822	chr8:52112545-52217822	0	-	52171597	52214257	789624	22	793,144,104,89,222,81,63,69,63,116,246,212,194,105,91,135,55,792,191,31,55,77,	0,3729,5792,13506,19412,20511,20693,24044,24875,30384,37186,46352,48829,51440,52589,54306,59023,59246,67576,99533,101657,105200,
#Partially deleted in new
chr8	52116270	52133218	chr8:52116270-52133218	0	-	52116270	52116270	8553170	5	148,104,89,222,162,	0,2067,9781,15687,16786,
#Partially deleted in new
chr8	52125883	52133144	chr8:52125883-52133144	0	-	52125883	52125883	8553170	3	257,222,88,	0,6074,7173,
#Partially deleted in new
chr8	52133103	52137812	chr8:52133103-52137812	0	-	52133103	52133103	8553170	4	34,63,69,392,	0,135,3486,4317,
#Partially deleted in new
chr8	52149921	52409805	chr8:52149921-52409805	0	-	52149921	52214257	789624	16	56,212,194,105,91,135,792,191,31,55,160,108,154,46,125,124,	0,8976,11453,14064,15213,16930,21870,30200,62157,64281,67820,70819,71718,80110,259406,259760,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	52150819	52154892	chr8:52150819-52154892	3	+	52150819	52150819	8553170	2	151,484,	0,3589,
#Partially deleted in new
chr8	52172512	52217779	chr8:52172512-52217779	0	-	52172512	52172512	8553170	6	71,191,315,31,55,34,	0,7609,28549,39566,41690,45233,
#Partially deleted in new
chr8	52180293	52409749	chr8:52180293-52409749	0	-	52180293	52180293	8553170	10	19,55,31,55,160,108,154,46,125,202,	0,21028,31785,33909,37448,40447,41346,49738,229034,229254,
#Partially deleted in new
chr8	52194361	52199580	chr8:52194361-52199580	3	+	52194361	52194361	789624	2	392,432,	0,4787,
#Partially deleted in new
chr8	52206415	52246664	chr8:52206415-52246664	0	-	52206415	52206415	8553170	7	335,31,55,108,154,46,79,	0,5663,7787,14325,15224,23616,40170,
#Partially deleted in new
chr8	52206582	52246664	chr8:52206582-52246664	0	-	52206582	52206582	8553170	9	168,88,31,55,89,108,154,46,79,	0,3447,5496,7620,11230,14158,15057,23449,40003,
#Partially deleted in new
chr8	52214219	52248526	chr8:52214219-52248526	0	-	52214219	52214257	789624	7	38,156,108,154,46,79,48,	0,3526,6521,7420,15812,32366,34259,
#Partially deleted in new
chr8	52217771	52249412	chr8:52217771-52249412	0	-	52217771	52217771	8553170	6	130,108,154,46,79,55,	0,2969,3868,12260,28814,31586,
#Partially deleted in new
chr8	52220563	52254348	chr8:52220563-52254348	0	-	52220563	52220563	8553170	4	285,154,46,99,	0,1076,9468,33686,
#Deleted in new
chr8	52220731	52222095	chr8:52220731-52222095	0	-	52220731	52220731	8553170	2	117,456,	0,908,
#Partially deleted in new
chr8	52229692	52409756	chr8:52229692-52409756	0	-	52229692	52229692	8553170	4	385,79,125,75,	0,16893,179635,179989,
#Partially deleted in new
chr8	52294454	52301942	chr8:52294454-52301942	3	+	52294454	52294454	8553170	3	107,223,92,	0,1883,7396,
#Partially deleted in new
chr8	52313153	52313500	chr8:52313153-52313500	7	-	52313153	52313153	16724991	1	347,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	52393575	52409792	chr8:52393575-52409792	0	-	52393575	52393575	8553170	3	304,125,111,	0,15752,16106,
#Deleted in new
chr8	52403326	52409772	chr8:52403326-52409772	0	-	52403326	52403326	8553170	3	360,125,91,	0,6001,6355,
#Deleted in new
chr8	52403700	52409945	chr8:52403700-52409945	0	-	52403700	52403700	8553170	3	4216,125,398,	0,5627,5847,
#Deleted in new
chr8	52405805	52409772	chr8:52405805-52409772	0	-	52405805	52405805	8553170	3	285,125,91,	0,3522,3876,
#Deleted in new
chr8	52407635	52409882	chr8:52407635-52409882	0	-	52407635	52407635	8553170	2	281,555,	0,1692,
#Deleted in new
chr8	52407664	52409879	chr8:52407664-52409879	0	-	52407664	52407664	8553170	3	252,125,198,	0,1663,2017,
#Partially deleted in new
chr8	52408982	52460959	chr8:52408982-52460959	0	-	52408982	52408982	8553170	2	470,75,	0,51902,
#Partially deleted in new
chr8	52534036	52565507	chr8:52534036-52565507	3	-	52538442	52565256	789624	5	564,77,81,54,441,	0,4394,5794,8355,31030,
#Partially deleted in new
chr8	52534541	52565408	chr8:52534541-52565408	1	-	52534589	52565256	789624	4	59,81,54,342,	0,5289,7850,30525,
#Partially deleted in new
chr8	52622455	52714432	chr8:52622455-52714432	3	-	52623781	52685469	789624	24	1404,71,137,59,48,55,241,109,166,1901,127,104,62,82,187,185,171,430,203,171,127,122,115,358,	0,2261,5576,8014,12465,13559,19895,20248,23246,33552,35542,36417,38140,38470,38639,39079,45565,51389,53913,61093,61431,62943,64397,91619,
#Partially deleted in new
chr8	52622458	52714423	chr8:52622458-52714423	1	-	52623781	52685469	789624	24	1401,71,128,59,48,55,241,109,166,1901,127,104,62,82,187,185,171,430,203,171,127,122,115,349,	0,2258,5582,8011,12462,13556,19892,20245,23243,33549,35539,36414,38137,38467,38636,39076,45562,51386,53910,61090,61428,62940,64394,91616,
#Partially deleted in new
chr8	52623328	52714437	chr8:52623328-52714437	0	-	52623328	52623328	8553170	3	143,22,363,	0,63617,90746,
#Partially deleted in new
chr8	52623583	52636034	chr8:52623583-52636034	0	-	52623670	52636034	789624	6	144,71,128,59,48,20,	0,1133,4457,6886,11337,12431,
#Partially deleted in new
chr8	52623713	52643243	chr8:52623713-52643243	0	-	52623713	52623713	8553170	8	146,71,137,59,48,55,241,540,	0,1003,4318,6756,11207,12301,18637,18990,
#Partially deleted in new
chr8	52657884	52661570	chr8:52657884-52661570	0	-	52658953	52661570	789624	6	24,127,104,82,187,36,	0,113,988,3041,3210,3650,
#Partially deleted in new
chr8	52683603	52714427	chr8:52683603-52714427	0	-	52683603	52683928	789624	4	116,127,115,353,	0,283,3249,30471,
#Partially deleted in new
chr8	52683687	52714466	chr8:52683687-52714466	0	-	52683687	52714133	789624	3	32,127,392,	0,199,30387,
#Partially deleted in new
chr8	52683949	52714444	chr8:52683949-52714444	0	-	52686897	52714133	789624	5	64,122,220,115,370,	0,1449,1987,2903,30125,
#Partially deleted in new
chr8	52685423	52745843	chr8:52685423-52745843	0	-	52685423	52685469	789624	3	97,115,295,	0,1429,60125,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	52722902	52723141	chr8:52722902-52723141	3	+	52722902	52722902	8553170	1	239,	0,
#Partially deleted in new
chr8	52938430	52941117	chr8:52938430-52941117	3	+	52939907	52940894	789624	1	2687,	0,
#Partially deleted in new
chr8	52975110	52976116	chr8:52975110-52976116	7	-	52975110	52975110	16724991	1	1006,	0,
#Partially deleted in new
chr8	53162338	53162987	chr8:53162338-53162987	7	+	53162338	53162338	16724991	2	171,147,	0,502,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	53177570	53216423	chr8:53177570-53216423	0	+	53177570	53177570	8553170	2	433,125,	0,38728,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	53225715	53251697	chr8:53225715-53251697	1	-	53229296	53235101	0	5	4114,353,174,305,250,	0,9043,17023,25065,25732,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	53225715	53251037	chr8:53225715-53251037	1	-	53229296	53251037	789624	4	4114,353,137,78,	0,9043,25065,25244,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	53225723	53251697	chr8:53225723-53251697	3	-	53229296	53251037	0	4	4106,353,305,250,	0,9035,25057,25724,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	53228790	53251617	chr8:53228790-53251617	0	-	53242818	53251037	789624	5	1039,353,174,305,170,	0,5968,13948,21990,22657,
#Partially deleted in new
chr8	53229202	53238732	chr8:53229202-53238732	1	-	53229296	53235101	0	3	627,353,215,	0,5556,9315,
#Partially deleted in new
chr8	53229212	53251412	chr8:53229212-53251412	1	-	53229296	53251037	0	3	617,353,632,	0,5546,21568,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	53388700	53390872	chr8:53388700-53390872	3	-	53388700	53388700	8553170	1	2172,	0,
#Deleted in new
chr8	53394214	53394795	chr8:53394214-53394795	7	+	53394214	53394214	16724991	1	581,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	53395210	53395946	chr8:53395210-53395946	3	-	53395210	53395210	8553170	2	546,48,	0,688,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	53515169	53515905	chr8:53515169-53515905	3	+	53515169	53515169	8553170	2	437,32,	0,704,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	53515170	53523931	chr8:53515170-53523931	3	-	53515170	53515170	8553170	2	1784,603,	0,8158,
#Partially deleted in new
chr8	53532907	53533704	chr8:53532907-53533704	7	+	53532907	53532907	16724991	2	69,409,	0,388,
#Partially deleted in new
chr8	53537059	53540300	chr8:53537059-53540300	7	+	53537059	53537059	16724991	2	947,1209,	0,2032,
#Deleted in new
chr8	53712696	53712896	chr8:53712696-53712896	7	+	53712696	53712696	16724991	1	200,	0,
#Partially deleted in new
chr8	53715556	53843558	chr8:53715556-53843558	1	-	53715963	53841690	789624	13	468,114,102,126,179,193,98,105,114,90,103,148,525,	0,28020,40998,54061,56432,80090,86242,99105,101860,113887,117427,126021,127477,
#Partially deleted in new
chr8	53715669	53743715	chr8:53715669-53743715	0	-	53715669	53715669	8553170	2	355,139,	0,27907,
#Partially deleted in new
chr8	53715672	53843262	chr8:53715672-53843262	3	-	53715963	53841690	789624	14	352,114,102,126,179,193,98,54,105,114,90,103,148,229,	0,27904,40882,53945,56316,79974,86126,95491,98989,101744,113771,117311,125905,127361,
#Partially deleted in new
chr8	53715672	53839961	chr8:53715672-53839961	1	-	53715963	53833079	789624	13	352,114,102,126,179,193,98,54,105,114,90,103,337,	0,27904,40882,53945,56316,79974,86126,95491,98989,101744,113771,117311,123952,
#Partially deleted in new
chr8	53715672	53739623	chr8:53715672-53739623	0	-	53715672	53715672	8553170	2	352,71,	0,23880,
#Partially deleted in new
chr8	53715672	53795761	chr8:53715672-53795761	0	-	53715672	53715672	8553170	2	352,115,	0,79974,
#Partially deleted in new
chr8	53715682	53769688	chr8:53715682-53769688	0	-	53715682	53715682	8553170	3	342,114,71,	0,27894,53935,
#Partially deleted in new
chr8	53715730	53843042	chr8:53715730-53843042	1	-	53715963	53841690	789624	14	294,114,102,126,179,193,98,54,105,114,90,103,148,172,	0,27846,40824,53887,56258,79916,86068,95433,98931,101686,113713,117253,125847,127140,
#Partially deleted in new
chr8	53715899	53843293	chr8:53715899-53843293	0	-	53829525	53841690	789624	14	125,114,102,126,179,193,98,54,105,114,90,26,148,260,	0,27677,40655,53718,56089,79747,85899,95264,98762,101517,113544,117161,125678,127134,
#Partially deleted in new
chr8	53743586	53801868	chr8:53743586-53801868	0	-	53743586	53743586	8553170	4	104,102,193,70,	0,12968,52060,58212,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	53756261	53772065	chr8:53756261-53772065	0	-	53756261	53756261	8553170	3	395,126,77,	0,13356,15727,
#Partially deleted in new
chr8	53769653	53817465	chr8:53769653-53817465	0	-	53769653	53769653	8553170	5	90,98,54,105,49,	0,32145,41510,45008,47763,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	53795749	53817503	chr8:53795749-53817503	0	-	53806843	53817503	789624	6	90,98,117,54,105,87,	0,6049,10992,15414,18912,21667,
#Partially deleted in new
chr8	53814674	53833189	chr8:53814674-53833189	0	-	53814674	53814674	8553170	4	92,114,90,206,	0,2742,14769,18309,
#Partially deleted in new
chr8	53814731	53843245	chr8:53814731-53843245	0	-	53829514	53841690	789624	6	35,114,90,26,101,212,	0,2685,14712,18252,26893,28302,
#Partially deleted in new
chr8	53829443	53843017	chr8:53829443-53843017	0	-	53829443	53841690	789624	4	90,103,148,62,	0,3540,12134,13512,
#Partially deleted in new
chr8	53829445	53842899	chr8:53829445-53842899	0	-	53829445	53841690	789624	4	88,103,148,396,	0,3538,12132,13058,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	53831788	53843259	chr8:53831788-53843259	0	-	53831788	53831788	8553170	3	1298,148,226,	0,9789,11245,
#Partially deleted in new
chr8	53832864	53839838	chr8:53832864-53839838	0	-	53832864	53832864	8553170	2	222,214,	0,6760,
#Partially deleted in new
chr8	53851807	53959303	chr8:53851807-53959303	3	+	53851899	53958458	789624	6	257,345,149,84,235,1034,	0,27450,87768,94857,102268,106462,
#Partially deleted in new
chr8	53851899	53959303	chr8:53851899-53959303	1	+	53851899	53958458	789624	5	165,149,84,235,1034,	0,87676,94765,102176,106370,
#Partially deleted in new
chr8	53851899	53959303	chr8:53851899-53959303	0	+	53851899	53946676	789624	4	165,84,235,1034,	0,94765,102176,106370,
#Partially deleted in new
chr8	53851899	53959303	chr8:53851899-53959303	0	+	53851899	53954123	789624	3	165,235,1034,	0,102176,106370,
#Partially deleted in new
chr8	53876149	53876649	chr8:53876149-53876649	3	-	53876149	53876149	8553170	1	500,	0,
#Partially deleted in new
chr8	53879883	53954142	chr8:53879883-53954142	0	+	53879883	53879883	8553170	4	155,149,84,67,	0,59692,66781,74192,
#Partially deleted in new
chr8	53879999	53954223	chr8:53879999-53954223	0	+	53879999	53879999	8553170	4	287,149,84,148,	0,59576,66665,74076,
#Partially deleted in new
chr8	53880871	53959296	chr8:53880871-53959296	1	+	53954130	53958458	789624	4	213,84,235,1027,	0,65793,73204,77398,
#Partially deleted in new
chr8	53880893	53959274	chr8:53880893-53959274	1	+	53881015	53958458	789624	5	191,149,84,235,1005,	0,58682,65771,73182,77376,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	53880900	53913922	chr8:53880900-53913922	0	+	53880900	53880900	789624	2	184,426,	0,32596,
#Partially deleted in new
chr8	53887007	53887244	chr8:53887007-53887244	7	-	53887007	53887007	16724991	1	237,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	53914718	53914824	chr8:53914718-53914824	3	+	53914718	53914718	8553170	1	106,	0,
#Partially deleted in new
chr8	53945324	53958697	chr8:53945324-53958697	0	+	53945324	53945324	8553170	4	46,84,235,428,	0,1340,8751,12945,
#Partially deleted in new
chr8	53966551	54022448	chr8:53966551-54022448	1	-	53968103	54022125	0	9	1561,72,147,155,57,146,88,106,386,	0,3840,12473,17811,20417,21562,27116,33393,55511,
#Partially deleted in new
chr8	53966555	54022529	chr8:53966555-54022529	3	-	53968103	54022125	0	10	1557,72,147,155,57,146,88,106,63,467,	0,3836,12469,17807,20413,21558,27112,33389,43874,55507,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	53966559	54022265	chr8:53966559-54022265	0	-	53966559	53966559	789624	12	1553,72,175,147,155,57,146,88,106,201,63,203,	0,3832,11963,12465,17803,20409,21554,27108,33385,36332,43870,55503,
#Partially deleted in new
chr8	53967169	54022269	chr8:53967169-54022269	1	-	53968103	54022125	789624	5	943,72,147,63,207,	0,3222,11855,43260,54893,
#Partially deleted in new
chr8	53970263	54022448	chr8:53970263-54022448	0	-	53970263	53970263	8553170	7	200,66,146,88,106,63,183,	0,16696,17850,23404,29681,40166,52002,
#Partially deleted in new
chr8	53970287	54022456	chr8:53970287-54022456	1	-	53970287	54022125	789624	9	6,72,147,155,57,146,88,106,394,	0,104,8737,14075,16681,17826,23380,29657,51775,
#Partially deleted in new
chr8	53970287	54022456	chr8:53970287-54022456	1	-	53970287	54022125	789624	10	6,72,147,155,57,146,88,106,63,394,	0,104,8737,14075,16681,17826,23380,29657,40142,51775,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	53971230	53974210	chr8:53971230-53974210	7	+	53971230	53971230	16724991	3	99,2299,81,	0,369,2899,
#Partially deleted in new
chr8	53993375	54022148	chr8:53993375-54022148	1	-	53993651	54022125	789624	4	380,106,63,86,	0,6569,17054,28687,
#Partially deleted in new
chr8	53993656	54022314	chr8:53993656-54022314	0	-	54002922	54022125	789624	5	99,106,49,63,252,	0,6288,9235,16773,28406,
#Partially deleted in new
chr8	53993694	54022310	chr8:53993694-54022310	0	-	53993694	53993694	8553170	5	61,106,63,61,248,	0,6250,16735,27831,28368,
#Partially deleted in new
chr8	53993703	54021929	chr8:53993703-54021929	0	-	53993703	53993703	8553170	4	52,106,63,404,	0,6241,16726,27822,
#Partially deleted in new
chr8	53999624	54022159	chr8:53999624-54022159	1	-	53999903	54022125	789624	3	426,63,97,	0,10805,22438,
#Partially deleted in new
chr8	54000009	54022326	chr8:54000009-54022326	0	-	54003074	54022125	789624	4	41,195,63,264,	0,2882,10420,22053,
#Partially deleted in new
chr8	54009762	54022125	chr8:54009762-54022125	1	-	54009762	54022125	789624	4	7,8,63,63,	0,524,667,12300,
#Partially deleted in new
chr8	54010101	54022125	chr8:54010101-54022125	1	-	54010101	54022125	789624	3	9,63,63,	0,328,11961,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	54042988	54045629	chr8:54042988-54045629	3	-	54042988	54042988	8553170	3	230,137,73,	0,1828,2568,
#Partially deleted in new
chr8	54046366	54102017	chr8:54046366-54102017	3	-	54048064	54101823	0	9	1752,177,102,74,71,48,66,32,263,	0,4645,6288,8693,15887,16961,19381,54541,55388,
#Partially deleted in new
chr8	54046367	54101554	chr8:54046367-54101554	1	-	54048064	54063350	789624	9	1751,177,102,74,71,48,66,32,205,	0,4644,6287,8692,15886,16960,19380,54540,54982,
#Partially deleted in new
chr8	54046367	54102017	chr8:54046367-54102017	1	-	54048064	54101823	789624	8	1751,177,74,71,48,66,32,263,	0,4644,8692,15886,16960,19380,54540,55387,
#Partially deleted in new
chr8	54047406	54101828	chr8:54047406-54101828	1	-	54048064	54101823	0	8	712,177,102,74,71,66,32,74,	0,3605,5248,7653,14847,18341,53501,54348,
#Partially deleted in new
chr8	54047791	54101444	chr8:54047791-54101444	0	-	54047791	54047791	8553170	6	327,135,102,74,32,95,	0,3220,4863,7268,53116,53558,
#Partially deleted in new
chr8	54047962	54052898	chr8:54047962-54052898	0	-	54047962	54047962	8553170	3	156,177,244,	0,3049,4692,
#Partially deleted in new
chr8	54051010	54101977	chr8:54051010-54101977	0	-	54051010	54101823	789624	7	178,102,74,71,66,32,223,	0,1644,4049,11243,14737,49897,50744,
#Partially deleted in new
chr8	54051071	54101855	chr8:54051071-54101855	1	-	54051112	54101823	789624	3	117,32,101,	0,49836,50683,
#Partially deleted in new
chr8	54051124	54101554	chr8:54051124-54101554	0	-	54051124	54051124	8553170	6	64,102,74,48,66,205,	0,1530,3935,12203,14623,50225,
#Partially deleted in new
chr8	54052653	54101535	chr8:54052653-54101535	0	-	54052653	54063350	789624	7	103,74,71,48,66,32,186,	0,2406,9600,10674,13094,48254,48696,
#Partially deleted in new
chr8	54052741	54101858	chr8:54052741-54101858	0	-	54052741	54101823	789624	6	15,74,71,48,32,104,	0,2318,9512,10586,48166,49013,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	54053197	54101849	chr8:54053197-54101849	0	-	54053197	54053197	8553170	7	471,74,71,48,66,32,95,	0,1862,9056,10130,12550,47710,48557,
#Partially deleted in new
chr8	54054452	54101854	chr8:54054452-54101854	0	-	54054452	54054452	8553170	5	681,48,66,32,100,	0,8875,11295,46455,47302,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	54055101	54101554	chr8:54055101-54101554	0	-	54055101	54055101	8553170	7	32,71,48,66,124,32,205,	0,7152,8226,10646,45122,45806,46248,
#Deleted in new
chr8	54073113	54073566	chr8:54073113-54073566	7	+	54073113	54073113	16724991	1	453,	0,
#Deleted in new
chr8	54100349	54101928	chr8:54100349-54101928	0	-	54100349	54100349	8553170	2	590,174,	0,1405,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	54130581	54130860	chr8:54130581-54130860	3	+	54130581	54130581	8553170	1	279,	0,
#Partially deleted in new
chr8	54135209	54147901	chr8:54135209-54147901	3	+	54135283	54147719	0	5	182,155,166,124,520,	0,1301,2058,7453,12172,
#Partially deleted in new
chr8	54135276	54142827	chr8:54135276-54142827	0	+	54135283	54142827	789624	4	115,155,166,165,	0,1234,1991,7386,
#Partially deleted in new
chr8	54136507	54147858	chr8:54136507-54147858	0	+	54136507	54147719	789624	5	31,55,166,124,477,	0,103,760,6155,10874,
#Deleted in new
chr8	54152806	54152882	chr8:54152806-54152882	3	-	54152806	54152806	8553170	1	76,	0,
#Partially deleted in new
chr8	54191581	54192035	chr8:54191581-54192035	7	-	54191581	54191581	16724991	1	454,	0,
#Partially deleted in new
chr8	54247632	54247906	chr8:54247632-54247906	7	+	54247632	54247632	16724991	1	274,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	54330686	54330895	chr8:54330686-54330895	3	+	54330686	54330686	5263520	1	209,	0,
#Deleted in new
chr8	54354167	54355118	chr8:54354167-54355118	7	+	54354167	54354167	16724991	1	951,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	54420467	54420725	chr8:54420467-54420725	3	+	54420467	54420467	8553170	1	258,	0,
#Deleted in new
chr8	54457934	54460888	chr8:54457934-54460888	3	+	54458138	54459995	0	2	511,1831,	0,1123,
#Partially deleted in new
chr8	54467207	54470609	chr8:54467207-54470609	7	+	54467207	54467207	16724991	2	195,424,	0,2978,
#Deleted in new
chr8	54479596	54479963	chr8:54479596-54479963	7	-	54479596	54479596	16724991	1	367,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	54509421	54560986	chr8:54509421-54560986	0	+	54509421	54509421	8553170	6	127,207,54,182,561,691,	0,23274,25874,37720,49338,50874,
#Deleted in new
chr8	54522798	54523297	chr8:54522798-54523297	7	-	54522798	54522798	16724991	1	499,	0,
#Partially deleted in new
chr8	54554360	54561927	chr8:54554360-54561927	0	+	54554360	54554360	8553170	4	130,561,194,224,	0,4399,5932,7343,
#Partially deleted in new
chr8	54554582	54558920	chr8:54554582-54558920	0	+	54554582	54554582	8553170	2	80,161,	0,4177,
#Deleted in new
chr8	54558759	54561907	chr8:54558759-54561907	0	+	54558759	54558759	8553170	4	221,168,194,204,	0,393,1533,2944,
#Partially deleted in new
chr8	54559168	54769977	chr8:54559168-54769977	1	+	54620966	54769813	789624	23	152,627,172,164,87,133,152,79,76,77,32,130,104,177,213,178,132,200,87,133,152,155,237,	0,61786,62948,89816,93611,96914,104530,114681,119292,120251,120427,120635,140298,142317,147274,160960,167176,175376,179774,195634,196450,199753,210572,
#Partially deleted in new
chr8	54616066	54630834	chr8:54616066-54630834	1	+	54620966	54630353	789624	4	136,627,172,6165,	0,4888,6050,8603,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr8	54616066	54871720	chr8:54616066-54871720	3	+	54620966	54869942	789624	29	136,627,172,164,87,133,152,79,76,208,130,104,177,213,178,132,200,87,133,152,155,59,45,164,220,155,79,82,1878,	0,4888,6050,32918,36713,40016,47632,57783,62394,63353,63737,83400,85419,90376,104062,110278,118478,122876,138736,139552,142855,153674,154056,167480,221383,236507,240961,249768,253776,
#Deleted in new
chr8	54696397	54697127	chr8:54696397-54697127	7	+	54696397	54696397	16724991	1	730,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	54796513	54869985	chr8:54796513-54869985	0	+	54796513	54796513	8553170	7	244,250,220,155,79,82,143,	0,5030,40936,56060,60514,69321,73329,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	55102388	55542054	chr8:55102388-55542054	3	+	55102488	55524227	789624	3	906,200,18774,	0,255289,420892,
#Partially deleted in new
chr8	55102456	55526149	chr8:55102456-55526149	1	+	55102488	55524227	789624	4	835,5,198,2869,	0,170445,255223,420824,
#Partially deleted in new
chr8	55135202	55142358	chr8:55135202-55142358	3	-	55135202	55135202	8553170	3	450,127,236,	0,4887,6920,
#Partially deleted in new
chr8	55161482	55164451	chr8:55161482-55164451	3	+	55161482	55161482	8553170	2	162,334,	0,2635,
#Deleted in new
chr8	55164122	55164727	chr8:55164122-55164727	1	+	55164122	55164122	8553170	2	61,315,	0,290,
#Deleted in new
chr8	55449508	55455139	chr8:55449508-55455139	7	-	55449508	55449508	16724991	1	5631,	0,
#Partially deleted in new
chr8	55517239	55520977	chr8:55517239-55520977	3	-	55517239	55517239	789624	2	547,43,	0,3695,
#Partially deleted in new
chr8	55526185	55533952	chr8:55526185-55533952	0	+	55526185	55526185	8553170	2	565,300,	0,7467,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	55738743	55763980	chr8:55738743-55763980	1	-	55740131	55762959	789624	7	1475,140,61,194,168,394,45,	0,4737,6317,12220,17500,23891,25192,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	55738757	55773407	chr8:55738757-55773407	3	-	55740131	55762959	789624	6	1461,194,168,394,45,139,	0,12206,17486,23877,25178,34511,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	55738757	55773354	chr8:55738757-55773354	1	-	55740131	55762959	789624	8	1461,140,61,194,168,394,45,86,	0,4723,6303,12206,17486,23877,25178,34511,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	55738757	55746047	chr8:55738757-55746047	0	-	55738757	55738757	8553170	3	1461,140,987,	0,4723,6303,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	55738765	55748115	chr8:55738765-55748115	1	-	55740131	55745109	789624	4	1453,140,975,1944,	0,4715,6295,7406,
#Partially deleted in new
chr8	55739700	55773352	chr8:55739700-55773352	1	-	55740131	55756394	789624	5	518,194,168,45,84,	0,11263,16543,24235,33568,
#Partially deleted in new
chr8	55739943	55756385	chr8:55739943-55756385	0	-	55743551	55756385	789624	4	275,140,194,142,	0,3537,11020,16300,
#Partially deleted in new
chr8	55740171	55773334	chr8:55740171-55773334	1	-	55740189	55756394	789624	5	47,61,194,168,66,	0,4889,10792,16072,33097,
#Partially deleted in new
chr8	55743480	55773367	chr8:55743480-55773367	0	-	55743480	55756394	789624	6	140,61,194,168,45,99,	0,1580,7483,12763,20455,29788,
#Partially deleted in new
chr8	55745077	55773381	chr8:55745077-55773381	0	-	55745077	55762959	789624	6	44,194,168,394,45,155,	0,5886,11166,17557,18858,28149,
#Partially deleted in new
chr8	55745091	55762775	chr8:55745091-55762775	0	-	55751529	55762775	789624	5	30,194,126,168,141,	0,5872,6329,11152,17543,
#Deleted in new
chr8	55745231	55745342	chr8:55745231-55745342	7	+	55745231	55745231	16724991	1	111,	0,
#Partially deleted in new
chr8	55750886	55756402	chr8:55750886-55756402	0	-	55750886	55750886	8553170	2	271,159,	0,5357,
#Partially deleted in new
chr8	55751050	55763008	chr8:55751050-55763008	0	-	55751050	55762959	789624	2	107,374,	0,11584,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	55756244	55773307	chr8:55756244-55773307	0	-	55756244	55762959	789624	5	167,394,65,45,39,	0,6390,7392,7691,17024,
#Partially deleted in new
chr8	55756357	55773121	chr8:55756357-55773121	0	-	55756357	55762959	789624	4	54,394,45,146,	0,6277,7578,16618,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	55760772	55773367	chr8:55760772-55773367	1	-	55762551	55762959	789624	3	2256,45,99,	0,3163,12496,
#Partially deleted in new
chr8	55762399	55773378	chr8:55762399-55773378	1	-	55762551	55762959	789624	3	629,45,152,	0,1536,10827,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	55762953	55773378	chr8:55762953-55773378	0	-	55762953	55762959	8553170	4	75,280,45,110,	0,468,982,10315,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr8	55773141	55825446	chr8:55773141-55825446	3	+	55773618	55824703	0	13	578,65,173,823,118,87,175,307,150,144,217,79,866,	0,9606,12577,13096,17040,19556,22836,25772,29315,31751,37739,39898,51439,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr8	55773469	55825448	chr8:55773469-55825448	0	+	55773618	55785779	789624	11	250,173,823,118,87,175,307,150,144,64,868,	0,12249,12768,16712,19228,22508,25444,28987,31423,39585,51111,
#Partially deleted in new
chr8	55790096	55798998	chr8:55790096-55798998	0	+	55790096	55790096	8553170	4	203,87,175,85,	0,2601,5881,8817,
#Partially deleted in new
chr8	55879812	56010572	chr8:55879812-56010572	3	+	55941859	56010110	0	13	291,137,46,106,99,104,150,153,183,77,154,132,665,	0,62042,66635,67805,70646,70868,72153,74019,86902,89904,118533,119605,130095,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr8	55879834	56014168	chr8:55879834-56014168	1	+	55941859	56010110	0	13	269,74,46,106,99,104,150,153,183,77,154,132,4261,	0,62020,66613,67783,70624,70846,72131,73997,86880,89882,118511,119583,130073,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	55893594	55895739	chr8:55893594-55895739	3	+	55893594	55893594	8553170	2	510,163,	0,1982,
#Deleted in new
chr8	55902722	55902855	chr8:55902722-55902855	3	-	55902722	55902722	5263520	1	133,	0,
#Partially deleted in new
chr8	55940233	55950748	chr8:55940233-55950748	0	+	55941859	55950748	789624	6	94,137,46,106,99,68,	0,1621,6214,7384,10225,10447,
#Partially deleted in new
chr8	55955095	55998448	chr8:55955095-55998448	0	+	55955095	55955095	8553170	4	198,183,77,103,	0,11619,14621,43250,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	55980239	55980540	chr8:55980239-55980540	3	-	55980239	55980239	8553170	1	301,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	56022018	56022313	chr8:56022018-56022313	3	-	56022018	56022018	8553170	1	295,	0,
#Partially deleted in new
chr8	56050037	56051207	chr8:56050037-56051207	7	-	56050037	56050037	16724991	1	1170,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	56067294	56074509	chr8:56067294-56074509	1	-	56069737	56074383	0	6	1236,131,156,74,100,129,	0,2408,5822,6400,6765,7086,
#Partially deleted in new
chr8	56069737	56074581	chr8:56069737-56074581	1	-	56069737	56074383	0	5	96,156,74,100,201,	0,3379,3957,4322,4643,
#Partially deleted in new
chr8	56072946	56074506	chr8:56072946-56074506	3	-	56073089	56074383	0	4	326,74,100,126,	0,748,1113,1434,
#Partially deleted in new
chr8	56073041	56074506	chr8:56073041-56074506	1	-	56073089	56073706	789624	3	231,74,447,	0,653,1018,
#Partially deleted in new
chr8	56073053	56074472	chr8:56073053-56074472	0	-	56073053	56073053	8553170	3	219,91,92,	0,1006,1327,
#Partially deleted in new
chr8	56073053	56074510	chr8:56073053-56074510	1	-	56073089	56073706	789624	3	219,74,130,	0,641,1327,
#Partially deleted in new
chr8	56073053	56074510	chr8:56073053-56074510	1	-	56073089	56074256	0	4	219,74,100,257,	0,641,1006,1200,
#Partially deleted in new
chr8	56073072	56074356	chr8:56073072-56074356	1	-	56073685	56074256	789624	3	696,100,103,	0,987,1181,
#Partially deleted in new
chr8	56073074	56074506	chr8:56073074-56074506	1	-	56073234	56074383	789624	3	198,100,126,	0,985,1306,
#Partially deleted in new
chr8	56073126	56074506	chr8:56073126-56074506	0	-	56073126	56073126	8553170	3	146,465,126,	0,568,1254,
#Partially deleted in new
chr8	56073315	56074498	chr8:56073315-56074498	1	-	56073685	56074383	789624	3	453,100,118,	0,744,1065,
#Partially deleted in new
chr8	56073461	56074506	chr8:56073461-56074506	0	-	56073461	56073461	8553170	2	698,126,	0,919,
#Partially deleted in new
chr8	56073834	56073901	chr8:56073834-56073901	3	-	56073834	56073834	789624	1	67,	0,
#Partially deleted in new
chr8	56074591	56075274	chr8:56074591-56075274	3	+	56074591	56074591	789624	2	289,268,	0,415,
#Partially deleted in new
chr8	56101198	56102267	chr8:56101198-56102267	7	-	56101198	56101198	16724991	2	615,147,	0,922,
#Deleted in new
chr8	56112941	56113982	chr8:56112941-56113982	3	-	56112941	56113982	789624	1	1041,	0,
#Deleted in new
chr8	56121241	56121352	chr8:56121241-56121352	3	-	56121241	56121241	8553170	1	111,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	56160903	56211279	chr8:56160903-56211279	3	-	56166242	56168269	789624	5	6600,359,99,105,159,	0,7124,10187,18505,50217,
#Partially deleted in new
chr8	56166033	56171424	chr8:56166033-56171424	0	-	56166033	56166033	8553170	3	1470,359,334,	0,1994,5057,
#Partially deleted in new
chr8	56166098	56211300	chr8:56166098-56211300	1	-	56166242	56167499	789624	3	1405,99,180,	0,4992,45022,
#Partially deleted in new
chr8	56166242	56211300	chr8:56166242-56211300	1	-	56166242	56168269	789624	4	1261,359,99,180,	0,1785,4848,44878,
#Deleted in new
chr8	56209252	56211324	chr8:56209252-56211324	0	-	56209252	56209252	8553170	2	231,204,	0,1868,
#Partially deleted in new
chr8	56211685	56217538	chr8:56211685-56217538	1	+	56214613	56216505	0	4	152,70,143,208,	0,2912,4703,5645,
#Partially deleted in new
chr8	56211754	56218613	chr8:56211754-56218613	3	+	56214613	56217435	0	4	83,70,99,1283,	0,2843,4678,5576,
#Partially deleted in new
chr8	56211755	56218615	chr8:56211755-56218615	1	+	56212850	56217435	0	5	82,148,70,99,1285,	0,1006,2842,4677,5575,
#Deleted in new
chr8	56211785	56213151	chr8:56211785-56213151	0	+	56211785	56211785	8553170	2	52,390,	0,976,
#Partially deleted in new
chr8	56211788	56216512	chr8:56211788-56216512	0	+	56214613	56216512	789624	3	386,70,80,	0,2809,4644,
#Partially deleted in new
chr8	56211788	56216893	chr8:56211788-56216893	1	+	56214613	56216561	789624	3	49,70,461,	0,2809,4644,
#Partially deleted in new
chr8	56211788	56217441	chr8:56211788-56217441	0	+	56212898	56216685	789624	6	49,148,70,99,75,111,	0,973,2809,4644,4891,5542,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	56211788	56217465	chr8:56211788-56217465	0	+	56211788	56211788	8553170	3	2879,143,135,	0,4600,5542,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	56211788	56215578	chr8:56211788-56215578	0	+	56211788	56211788	8553170	2	49,981,	0,2809,
#Partially deleted in new
chr8	56211788	56217412	chr8:56211788-56217412	0	+	56212898	56216505	789624	6	49,148,70,143,75,82,	0,973,2809,4600,4891,5542,
#Partially deleted in new
chr8	56211788	56217429	chr8:56211788-56217429	0	+	56212898	56216505	789624	6	49,148,70,118,75,99,	0,973,2809,4600,4891,5542,
#Partially deleted in new
chr8	56211797	56218619	chr8:56211797-56218619	1	+	56212869	56216505	0	5	40,128,70,143,1289,	0,964,2800,4591,5533,
#Partially deleted in new
chr8	56211797	56218798	chr8:56211797-56218798	1	+	56212869	56217435	0	5	40,128,70,99,1468,	0,964,2800,4635,5533,
#Partially deleted in new
chr8	56211798	56218524	chr8:56211798-56218524	1	+	56212898	56217435	789624	5	39,148,70,99,1194,	0,963,2799,4634,5532,
#Partially deleted in new
chr8	56211807	56217713	chr8:56211807-56217713	1	+	56214613	56217343	789624	4	30,70,74,383,	0,2790,4625,5523,
#Partially deleted in new
chr8	56211809	56217689	chr8:56211809-56217689	1	+	56212869	56216505	0	5	28,128,70,118,359,	0,952,2788,4579,5521,
#Partially deleted in new
chr8	56214427	56217469	chr8:56214427-56217469	1	+	56214613	56216505	0	4	90,70,143,139,	0,170,1961,2903,
#Partially deleted in new
chr8	56214444	56217590	chr8:56214444-56217590	0	+	56214444	56214444	8553170	3	223,99,260,	0,1988,2886,
#Deleted in new
chr8	56222687	56223173	chr8:56222687-56223173	3	+	56222687	56222687	8553170	1	486,	0,
#Partially deleted in new
chr8	56252959	56253372	chr8:56252959-56253372	7	-	56252959	56252959	16724991	2	94,282,	0,131,
#Partially deleted in new
chr8	56300009	56320175	chr8:56300009-56320175	1	-	56301479	56316347	789624	6	1564,126,145,100,347,117,	0,5587,6666,8918,16005,20049,
#Partially deleted in new
chr8	56301207	56320682	chr8:56301207-56320682	3	-	56301479	56316347	789624	7	366,126,145,100,132,347,624,	0,4389,5468,7720,10949,14807,18851,
#Partially deleted in new
chr8	56301300	56320776	chr8:56301300-56320776	1	-	56303963	56316347	789624	8	273,147,126,145,100,132,347,718,	0,2637,4296,5375,7627,10856,14714,18758,
#Partially deleted in new
chr8	56373063	56395365	chr8:56373063-56395365	7	-	56373063	56373063	16724991	6	131,126,145,100,132,321,	0,1654,8891,9459,17059,21981,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	56374765	56390811	chr8:56374765-56390811	4	-	56374765	56374765	16724991	5	78,158,132,107,11,	0,7176,15357,15836,16035,
#Partially deleted in new
chr8	56436673	56445944	chr8:56436673-56445944	2	-	56436938	56445944	789624	2	403,129,	0,9142,
#Partially deleted in new
chr8	56436714	56438510	chr8:56436714-56438510	0	-	56436714	56436714	8553170	2	362,76,	0,1720,
#Deleted in new
chr8	56440953	56446030	chr8:56440953-56446030	1	-	56441271	56445953	0	2	984,215,	0,4862,
#Deleted in new
chr8	56441271	56446734	chr8:56441271-56446734	1	-	56441271	56445953	0	4	666,141,56,166,	0,4544,5154,5297,
#Deleted in new
chr8	56441391	56445648	chr8:56441391-56445648	0	-	56441391	56441391	8553170	2	546,60,	0,4197,
#Deleted in new
chr8	56441758	56446572	chr8:56441758-56446572	0	-	56441758	56445953	789624	3	179,141,147,	0,4057,4667,
#Deleted in new
chr8	56443517	56446641	chr8:56443517-56446641	1	-	56443917	56445953	789624	4	502,141,56,73,	0,2298,2908,3051,
#Deleted in new
chr8	56445244	56446663	chr8:56445244-56446663	1	-	56445674	56445953	789624	3	712,56,95,	0,1181,1324,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	56445806	56552067	chr8:56445806-56552067	3	+	56445806	56445806	789624	4	694,133,66,1750,	0,50416,102486,104511,
#Deleted in new
chr8	56446005	56446671	chr8:56446005-56446671	0	-	56446005	56446005	8553170	2	476,103,	0,563,
#Deleted in new
chr8	56476825	56477987	chr8:56476825-56477987	7	-	56476825	56476825	16724991	1	1162,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	56489097	56527136	chr8:56489097-56527136	0	+	56489097	56489097	8553170	4	153,133,126,156,	0,7125,35526,37883,
#Partially deleted in new
chr8	56496245	56559586	chr8:56496245-56559586	0	-	56496245	56496245	8553170	3	88,447,29,	0,23875,63312,
#Partially deleted in new
chr8	56518320	56559671	chr8:56518320-56559671	3	-	56518320	56518320	789624	3	1700,447,219,	0,1800,41132,
#Partially deleted in new
chr8	56520158	56559497	chr8:56520158-56559497	0	-	56520158	56520158	8553170	3	409,100,45,	0,23920,39294,
#Partially deleted in new
chr8	56520314	56559684	chr8:56520314-56559684	0	-	56520314	56520314	8553170	2	321,232,	0,39138,
#Partially deleted in new
chr8	56520377	56559823	chr8:56520377-56559823	0	-	56520377	56520377	8553170	2	190,371,	0,39075,
#Partially deleted in new
chr8	56520386	56559793	chr8:56520386-56559793	0	-	56520386	56520386	8553170	2	228,341,	0,39066,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	56536757	56540497	chr8:56536757-56540497	3	-	56536757	56536757	8553170	2	446,109,	0,3631,
#Deleted in new
chr8	56537056	56540434	chr8:56537056-56540434	1	-	56537056	56537056	8553170	3	147,306,46,	0,1532,3332,
#Deleted in new
chr8	56588384	56588787	chr8:56588384-56588787	7	+	56588384	56588384	16724991	1	403,	0,
#Deleted in new
chr8	56588406	56588700	chr8:56588406-56588700	5	+	56588406	56588406	16724991	1	294,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	56639900	56656465	chr8:56639900-56656465	3	-	56639900	56639900	8553170	4	52,216,142,174,	0,5731,15007,16391,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	56776282	56776874	chr8:56776282-56776874	7	+	56776282	56776282	16724991	1	592,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	56957932	56993844	chr8:56957932-56993844	3	-	56963792	56993585	789624	5	6132,162,96,163,646,	0,8258,20117,22102,35266,
#Partially deleted in new
chr8	56963925	56980112	chr8:56963925-56980112	0	-	56967144	56980112	789624	5	139,162,109,96,78,	0,2265,3184,14124,16109,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	56964132	56993360	chr8:56964132-56993360	0	-	56964370	56993360	789624	3	286,39,162,	0,16026,29066,
#Deleted in new
chr8	57126654	57126762	chr8:57126654-57126762	7	-	57126654	57126654	16724991	1	108,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	57142688	57201088	chr8:57142688-57201088	3	+	57142688	57142688	8553170	4	197,166,127,72,	0,7912,51196,58328,
#Partially deleted in new
chr8	57193589	57208632	chr8:57193589-57208632	1	+	57193589	57193589	8553170	4	100,127,196,134,	0,295,14419,14909,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	57193593	57203168	chr8:57193593-57203168	0	+	57193593	57193593	8553170	3	96,127,250,	0,291,9325,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	57193619	57240298	chr8:57193619-57240298	0	+	57193619	57193619	8553170	5	97,127,102,184,204,	0,265,28975,35925,46475,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	57218533	57220236	chr8:57218533-57220236	0	+	57218533	57218533	8553170	3	162,114,126,	0,876,1577,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	57219088	57232636	chr8:57219088-57232636	1	+	57219088	57219088	789624	8	50,214,185,209,103,102,184,1245,	0,321,1022,2310,3080,3506,10456,12303,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	57219378	57220738	chr8:57219378-57220738	0	+	57219378	57219378	8553170	3	245,185,150,	0,732,1210,
#Deleted in new
chr8	57240056	57240541	chr8:57240056-57240541	7	+	57240056	57240056	16724991	2	168,156,	0,329,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	57261225	57266613	chr8:57261225-57266613	3	+	57261225	57261225	789624	3	114,1584,1273,	0,308,4115,
#Deleted in new
chr8	57279542	57284731	chr8:57279542-57284731	3	+	57279542	57279542	5263520	4	1222,244,115,294,	0,2428,4618,4895,
#Deleted in new
chr8	57289551	57289649	chr8:57289551-57289649	3	+	57289551	57289551	8553170	1	98,	0,
#Partially deleted in new
chr8	57343806	57346843	chr8:57343806-57346843	0	+	57343806	57343806	8553170	3	209,210,150,	0,1124,2887,
#Deleted in new
chr8	57392545	57392882	chr8:57392545-57392882	7	+	57392545	57392545	16724991	1	337,	0,
#Partially deleted in new
chr8	57492883	57545943	chr8:57492883-57545943	3	+	57492883	57492883	8553170	2	92,475,	0,52585,
#Partially deleted in new
chr8	57492898	57591559	chr8:57492898-57591559	0	+	57492898	57492898	8553170	2	77,80,	0,98581,
#Partially deleted in new
chr8	57594165	57805029	chr8:57594165-57805029	3	-	57594165	57594165	8553170	3	297,51,222,	0,192392,210642,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	57746148	57750199	chr8:57746148-57750199	3	+	57746148	57746148	789624	2	202,2259,	0,1792,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	57855499	57984114	chr8:57855499-57984114	3	+	57855499	57855499	8553170	4	101,225,121,1849,	0,8894,125394,126766,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	57889575	57890809	chr8:57889575-57890809	3	-	57889575	57889575	8553170	2	571,209,	0,1025,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	57978357	57984126	chr8:57978357-57984126	0	+	57978357	57978357	789624	3	127,121,1861,	0,2536,3908,
#Partially deleted in new
chr8	57994508	58145999	chr8:57994508-58145999	0	+	57994508	57994508	8553170	4	298,98,89,93,	0,37097,81026,151398,
#Partially deleted in new
chr8	57994553	58148788	chr8:57994553-58148788	3	+	58146230	58147343	789624	5	253,98,116,89,2882,	0,37052,48630,80981,151353,
#Partially deleted in new
chr8	57994567	58204279	chr8:57994567-58204279	0	+	57994567	57994567	8553170	5	239,98,89,327,765,	0,37038,80967,203263,208947,
#Deleted in new
chr8	58031333	58032682	chr8:58031333-58032682	3	-	58031333	58031333	8553170	2	352,525,	0,824,
#Partially deleted in new
chr8	58031615	58146040	chr8:58031615-58146040	0	+	58031615	58031615	8553170	4	88,89,88,134,	0,43919,45511,114291,
#Partially deleted in new
chr8	58070206	58075623	chr8:58070206-58075623	0	+	58070206	58070206	8553170	2	181,89,	0,5328,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	58070226	58198092	chr8:58070226-58198092	0	+	58070226	58070226	8553170	4	136,89,99,262,	0,5308,119091,127604,
#Partially deleted in new
chr8	58070317	58146037	chr8:58070317-58146037	0	+	58070317	58070317	8553170	4	45,89,88,131,	0,5217,6809,75589,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	58091441	58106294	chr8:58091441-58106294	3	-	58091441	58091441	8553170	4	183,214,139,89,	0,7482,9427,14764,
#Partially deleted in new
chr8	58113188	58113622	chr8:58113188-58113622	7	-	58113188	58113188	16724991	1	434,	0,
#Partially deleted in new
chr8	58255770	58272101	chr8:58255770-58272101	3	-	58255770	58255770	789624	8	323,75,59,228,277,229,267,232,	0,1323,2016,3278,3977,4754,15510,16099,
#Deleted in new
chr8	58259730	58260753	chr8:58259730-58260753	0	-	58259730	58259730	8553170	2	294,229,	0,794,
#Partially deleted in new
chr8	58259737	58272042	chr8:58259737-58272042	0	-	58259737	58259737	8553170	3	104,167,39,	0,120,12266,
#Partially deleted in new
chr8	58260672	58272119	chr8:58260672-58272119	0	-	58260672	58260672	8553170	2	81,250,	0,11197,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	58411263	58451501	chr8:58411263-58451501	3	+	58411385	58447551	789624	8	206,104,151,84,110,138,162,4113,	0,5586,19255,21896,23131,28369,34643,36125,
#Partially deleted in new
chr8	58411358	58434941	chr8:58411358-58434941	0	+	58411358	58411358	8553170	7	111,73,104,151,84,110,84,	0,1940,5491,19160,21801,23036,23499,
#Partially deleted in new
chr8	58411380	58446065	chr8:58411380-58446065	0	+	58411385	58434437	789624	6	89,104,84,110,138,159,	0,5469,21779,23014,28252,34526,
#Partially deleted in new
chr8	58411380	58447684	chr8:58411380-58447684	0	+	58411385	58434915	789624	9	89,104,151,84,110,91,138,162,296,	0,5469,19138,21779,23014,23477,28252,34526,36008,
#Partially deleted in new
chr8	58411385	58434915	chr8:58411385-58434915	1	+	58411385	58434915	789624	6	84,104,151,84,110,58,	0,5464,19133,21774,23009,23472,
#Partially deleted in new
chr8	58416929	58435106	chr8:58416929-58435106	0	+	58416929	58434915	789624	5	24,151,84,110,249,	0,13589,16230,17465,17928,
#Partially deleted in new
chr8	58424587	58426685	chr8:58424587-58426685	7	-	58424587	58424587	16724991	2	1602,177,	0,1921,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	58490177	58500236	chr8:58490177-58500236	3	-	58491474	58500098	0	6	1597,176,131,587,241,218,	0,2175,4328,6426,8051,9841,
#Deleted in new
chr8	58503587	58504068	chr8:58503587-58504068	7	+	58503587	58503587	16724991	1	481,	0,
#Partially deleted in new
chr8	58552923	58572301	chr8:58552923-58572301	0	+	58552923	58552923	8553170	3	380,79,97,	0,17963,19281,
#Partially deleted in new
chr8	58553168	58582860	chr8:58553168-58582860	3	+	58565033	58581740	0	9	135,66,79,110,162,176,172,92,1175,	0,11850,17718,19036,22731,24864,26454,27348,28517,
#Partially deleted in new
chr8	58553215	58582846	chr8:58553215-58582846	1	+	58565033	58581740	0	9	88,66,79,110,159,176,172,92,1161,	0,11803,17671,18989,22687,24817,26407,27301,28470,
#Partially deleted in new
chr8	58553216	58582830	chr8:58553216-58582830	1	+	58565033	58581740	0	9	87,63,79,110,162,176,172,92,1145,	0,11805,17670,18988,22683,24816,26406,27300,28469,
#Partially deleted in new
chr8	58553236	58582056	chr8:58553236-58582056	1	+	58565033	58581740	0	9	67,48,79,110,162,176,172,92,371,	0,11782,17650,18968,22663,24796,26386,27280,28449,
#Partially deleted in new
chr8	58553253	58582858	chr8:58553253-58582858	1	+	58561747	58581740	789624	10	50,1512,66,79,110,159,176,172,92,1173,	0,7030,11765,17633,18951,22649,24779,26369,27263,28432,
#Partially deleted in new
chr8	58553254	58582053	chr8:58553254-58582053	1	+	58565033	58581740	789624	8	49,66,79,110,161,172,92,368,	0,11764,17632,18950,24793,26368,27262,28431,
#Partially deleted in new
chr8	58553260	58578384	chr8:58553260-58578384	0	+	58553260	58553260	8553170	6	43,66,79,110,162,352,	0,11758,17626,18944,22639,24772,
#Partially deleted in new
chr8	58553261	58576366	chr8:58553261-58576366	0	+	58553261	58553261	8553170	5	42,66,79,110,467,	0,11757,17625,18943,22638,
#Partially deleted in new
chr8	58561747	58582859	chr8:58561747-58582859	1	+	58561747	58581740	789624	9	48,66,79,110,159,176,172,92,1174,	0,3271,9139,10457,14155,16285,17875,18769,19938,
#Partially deleted in new
chr8	58565015	58581759	chr8:58565015-58581759	1	+	58565033	58581740	789624	7	69,79,110,176,172,92,74,	0,5871,7189,13017,14607,15501,16670,
#Partially deleted in new
chr8	58570711	58578070	chr8:58570711-58578070	0	+	58570711	58570711	8553170	4	254,110,162,38,	0,1493,5188,7321,
#Deleted in new
chr8	58577992	58579949	chr8:58577992-58579949	0	+	58577992	58577992	8553170	2	216,327,	0,1630,
#Partially deleted in new
chr8	58583503	58659844	chr8:58583503-58659844	3	-	58584105	58659631	789624	31	697,110,103,151,84,124,68,68,59,100,164,43,132,121,52,64,91,80,177,109,72,130,53,48,72,51,37,68,79,90,272,	0,2148,2394,2954,4114,5948,6503,7363,10728,12056,13883,14356,15728,16246,16466,17781,17941,18554,19706,22423,24265,26100,39716,39873,40205,47992,51685,51801,51964,59480,76069,
#Partially deleted in new
chr8	58583531	58659780	chr8:58583531-58659780	0	-	58640086	58659631	8553170	33	669,110,103,151,84,107,68,68,59,100,164,43,145,121,52,64,91,80,177,109,72,130,53,48,72,51,37,68,79,156,135,90,208,	0,2120,2366,2926,4086,5920,6475,7335,10700,12028,13855,14328,15700,16218,16438,17753,17913,18526,19678,22395,24237,26072,39688,39845,40177,47964,51657,51773,51936,53702,56436,59452,76041,
#Partially deleted in new
chr8	58583769	58659534	chr8:58583769-58659534	1	-	58584105	58659346	789624	31	431,110,103,151,84,124,68,68,59,100,164,43,132,121,52,64,91,80,177,109,72,130,53,48,72,51,37,68,79,90,340,	0,1882,2128,2688,3848,5682,6237,7097,10462,11790,13617,14090,15462,15980,16200,17515,17675,18288,19440,22157,23999,25834,39450,39607,39939,47726,51419,51535,51698,59214,75425,
#Partially deleted in new
chr8	58583808	58586578	chr8:58583808-58586578	0	-	58583808	58583808	8553170	3	392,349,121,	0,1843,2649,
#Partially deleted in new
chr8	58586348	58591009	chr8:58586348-58591009	0	-	58586348	58586348	8553170	5	260,84,124,68,143,	0,1269,3103,3658,4518,
#Partially deleted in new
chr8	58586358	58589656	chr8:58586358-58589656	0	-	58586358	58586358	8553170	3	250,84,205,	0,1259,3093,
#Partially deleted in new
chr8	58587648	58595902	chr8:58587648-58595902	0	-	58587648	58587648	8553170	7	53,124,68,68,59,100,103,	0,1803,2358,3218,6583,7911,8151,
#Deleted in new
chr8	58588419	58588764	chr8:58588419-58588764	7	-	58588419	58588419	16724991	1	345,	0,
#Partially deleted in new
chr8	58589521	58594300	chr8:58589521-58594300	0	-	58589521	58589521	8553170	3	553,68,69,	0,1345,4710,
#Partially deleted in new
chr8	58589751	58594878	chr8:58589751-58594878	0	-	58589751	58589751	8553170	4	323,68,59,141,	0,1115,4480,4986,
#Partially deleted in new
chr8	58590000	58599480	chr8:58590000-58599480	0	-	58590000	58590000	8553170	7	74,68,59,100,164,43,249,	0,866,4231,5559,7386,7859,9231,
#Partially deleted in new
chr8	58590865	58594747	chr8:58590865-58594747	0	-	58590865	58590865	8553170	2	69,516,	0,3366,
#Partially deleted in new
chr8	58597402	58600178	chr8:58597402-58600178	0	-	58597402	58597402	8553170	6	148,43,132,121,52,66,	0,457,1829,2347,2567,2710,
#Partially deleted in new
chr8	58597472	58600178	chr8:58597472-58600178	0	-	58597472	58597472	8553170	5	78,43,132,121,209,	0,387,1759,2277,2497,
#Partially deleted in new
chr8	58601167	58623419	chr8:58601167-58623419	0	-	58601167	58601167	8553170	9	181,91,80,177,109,72,130,53,43,	0,277,890,2042,4759,6601,8436,22052,22209,
#Partially deleted in new
chr8	58623746	58659638	chr8:58623746-58659638	0	-	58637340	58659631	789624	8	34,51,37,68,79,156,90,66,	0,7749,11442,11558,11721,13487,19237,35826,
#Partially deleted in new
chr8	58623750	58659664	chr8:58623750-58659664	0	-	58640086	58659631	789624	8	30,51,37,68,79,135,90,92,	0,7745,11438,11554,11717,16217,19233,35822,
#Partially deleted in new
chr8	58631364	58659698	chr8:58631364-58659698	0	-	58631364	58631364	8553170	6	182,37,68,79,90,126,	0,3824,3940,4103,11619,28208,
#Partially deleted in new
chr8	58631427	58659214	chr8:58631427-58659214	0	-	58631427	58631427	8553170	6	119,37,68,79,90,20,	0,3761,3877,4040,11556,27767,
#Partially deleted in new
chr8	58805417	59119208	chr8:58805417-59119208	3	-	58807746	59118987	789624	9	2366,152,387,81,231,282,243,66,323,	0,2700,9920,21404,32663,46106,133884,154525,313468,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	58814411	58814552	chr8:58814411-58814552	3	-	58814411	58814411	8553170	1	141,	0,
#Deleted in new
chr8	58991719	58992938	chr8:58991719-58992938	3	-	58991719	58991719	8553170	2	413,138,	0,1081,
#Deleted in new
chr8	59119039	59120031	chr8:59119039-59120031	0	+	59119039	59119039	8553170	2	246,446,	0,546,
#Deleted in new
chr8	59119217	59121346	chr8:59119217-59121346	3	+	59119217	59119217	8553170	2	68,1011,	0,1118,
#Deleted in new
chr8	59119945	59121315	chr8:59119945-59121315	1	+	59119945	59119945	8553170	2	126,980,	0,390,
#Deleted in new
chr8	59137371	59137502	chr8:59137371-59137502	3	-	59137371	59137371	8553170	1	131,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	59455884	59456010	chr8:59455884-59456010	7	+	59455884	59455884	16724991	1	126,	0,
#Deleted in new
chr8	59557527	59557855	chr8:59557527-59557855	7	-	59557527	59557527	16724991	1	328,	0,
#Partially deleted in new
chr8	59601403	59613775	chr8:59601403-59613775	3	+	59601403	59601403	8553170	3	49,71,395,	0,11415,11977,
#Deleted in new
chr8	59760046	59760263	chr8:59760046-59760263	7	+	59760046	59760046	16724991	1	217,	0,
#Deleted in new
chr8	59821123	59821433	chr8:59821123-59821433	7	+	59821123	59821123	16724991	1	310,	0,
#Partially deleted in new
chr8	59893855	59893942	chr8:59893855-59893942	7	-	59893855	59893855	16724991	1	87,	0,
#Partially deleted in new
chr8	60049586	60074715	chr8:60049586-60074715	3	+	60049586	60049586	8553170	3	33,278,122,	0,8664,25007,
#Deleted in new
chr8	60141820	60142142	chr8:60141820-60142142	7	+	60141820	60141820	16724991	1	322,	0,
#Partially deleted in new
chr8	60187346	60281412	chr8:60187346-60281412	3	-	60208784	60281147	0	9	2639,170,113,49,63,96,125,192,365,	0,21403,35302,37190,39526,44937,78578,92342,93701,
#Partially deleted in new
chr8	60208070	60281385	chr8:60208070-60281385	0	-	60208070	60208070	8553170	8	849,113,49,63,96,125,192,338,	0,14578,16466,18802,24213,57854,71618,72977,
#Partially deleted in new
chr8	60222648	60232673	chr8:60222648-60232673	0	-	60222648	60222648	8553170	5	113,49,63,96,189,	0,1888,4224,9635,9836,
#Partially deleted in new
chr8	60264821	60281324	chr8:60264821-60281324	0	-	60264821	60264821	8553170	3	1228,192,277,	0,14867,16226,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	60384587	60516780	chr8:60384587-60516780	3	-	60384587	60384587	8553170	4	78,200,116,183,	0,619,124059,132010,
#Deleted in new
chr8	60387261	60387995	chr8:60387261-60387995	7	+	60387261	60387261	16724991	1	734,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	60403211	60413818	chr8:60403211-60413818	1	-	60403211	60403211	789624	3	2038,143,263,	0,5143,10344,
#Partially deleted in new
chr8	60404678	60413930	chr8:60404678-60413930	1	-	60404678	60404678	8553170	4	571,127,274,375,	0,7815,8518,8877,
#Deleted in new
chr8	60412339	60413254	chr8:60412339-60413254	0	-	60412339	60412339	8553170	2	444,58,	0,857,
#Deleted in new
chr8	60413009	60413652	chr8:60413009-60413652	0	-	60413009	60413009	8553170	2	461,97,	0,546,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	60468862	60516795	chr8:60468862-60516795	0	-	60468862	60468862	8553170	3	254,116,198,	0,39784,47735,
#Partially deleted in new
chr8	60516856	60623627	chr8:60516856-60623627	3	+	60517207	60620769	0	8	397,72,68,83,93,112,69,2954,	0,41995,55189,67351,67866,75001,101723,103817,
#Partially deleted in new
chr8	60516935	60620988	chr8:60516935-60620988	1	+	60517207	60620769	0	7	318,68,83,93,112,69,315,	0,55110,67272,67787,74922,101644,103738,
#Partially deleted in new
chr8	60517175	60559279	chr8:60517175-60559279	0	+	60517175	60517175	8553170	2	78,428,	0,41676,
#Partially deleted in new
chr8	60517180	60620895	chr8:60517180-60620895	1	+	60517207	60620788	789624	7	73,72,68,83,93,69,222,	0,41671,54865,67027,67542,101399,103493,
#Partially deleted in new
chr8	60517223	60620948	chr8:60517223-60620948	0	+	60517223	60584812	789624	9	30,72,68,64,83,93,112,69,275,	0,41628,54822,59010,66984,67499,74634,101356,103450,
#Partially deleted in new
chr8	60517235	60592117	chr8:60517235-60592117	0	+	60517235	60517235	8553170	6	18,72,68,83,93,260,	0,41616,54810,66972,67487,74622,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	60551956	60553036	chr8:60551956-60553036	3	-	60551956	60551956	8553170	2	21,668,	0,412,
#Partially deleted in new
chr8	60558407	60572095	chr8:60558407-60572095	0	+	60572065	60572095	789624	2	516,50,	0,13638,
#Partially deleted in new
chr8	60558851	60584806	chr8:60558851-60584806	0	+	60558851	60572079	789624	5	72,103,68,83,84,	0,11103,13194,25356,25871,
#Partially deleted in new
chr8	60569928	60591937	chr8:60569928-60591937	0	+	60569928	60569928	8553170	5	129,68,83,93,80,	0,2117,14279,14794,21929,
#Partially deleted in new
chr8	60584043	60620941	chr8:60584043-60620941	0	+	60584043	60584043	8553170	6	34,83,93,112,69,268,	0,164,679,7814,34536,36630,
#Partially deleted in new
chr8	60584722	60619111	chr8:60584722-60619111	0	+	60584722	60618687	789624	3	93,112,532,	0,7135,33857,
#Partially deleted in new
chr8	60591689	60620938	chr8:60591689-60620938	0	+	60591689	60591689	8553170	3	280,69,265,	0,26890,28984,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	60629661	60653558	chr8:60629661-60653558	3	-	60629661	60629661	8553170	3	2246,57,37,	0,3399,23860,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	60631508	60632771	chr8:60631508-60632771	0	-	60631508	60631508	8553170	2	399,176,	0,1087,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	60631554	60636271	chr8:60631554-60636271	1	-	60631554	60631554	8553170	2	353,3211,	0,1506,
#Deleted in new
chr8	60652501	60653561	chr8:60652501-60653561	1	-	60652501	60652501	8553170	3	178,144,108,	0,653,952,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	60660819	60664530	chr8:60660819-60664530	3	+	60660819	60660819	8553170	2	365,164,	0,3547,
#Partially deleted in new
chr8	60678777	60868028	chr8:60678777-60868028	3	+	60741432	60865933	0	38	305,1839,431,142,138,66,56,115,84,138,122,244,177,144,256,211,196,168,180,111,206,200,160,90,104,130,73,58,229,209,672,161,228,444,222,141,105,3013,	0,62481,102222,116208,121610,122750,129439,137609,141229,143012,143246,143725,145062,149885,151544,157295,158039,158890,159298,162866,163069,166086,166472,169737,170273,171715,172254,172484,173241,173720,174051,175585,177197,177667,182126,183418,183770,186238,
#Partially deleted in new
chr8	60679563	60741530	chr8:60679563-60741530	0	+	60741432	60741530	789624	2	228,272,	0,61695,
#Partially deleted in new
chr8	60741364	60866474	chr8:60741364-60866474	1	+	60741432	60865933	0	5	1733,51,108,105,1459,	0,39635,120864,121183,123651,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	60741432	60825415	chr8:60741432-60825415	1	+	60741432	60824055	0	12	1665,431,142,138,66,56,115,84,138,122,244,1576,	0,39567,53553,58955,60095,66784,74954,78574,80357,80591,81070,82407,
#Partially deleted in new
chr8	60741854	60781124	chr8:60741854-60781124	0	+	60741854	60742846	789624	3	31,278,125,	0,965,39145,
#Partially deleted in new
chr8	60743031	60800526	chr8:60743031-60800526	0	+	60743031	60794988	789624	4	66,51,142,139,	0,37968,51954,57356,
#Deleted in new
chr8	60808734	60809606	chr8:60808734-60809606	3	-	60808734	60808734	8553170	2	192,109,	0,763,
#Deleted in new
chr8	60850736	60852639	chr8:60850736-60852639	0	+	60850736	60850736	8553170	5	25,73,58,229,142,	0,295,525,1282,1761,
#Deleted in new
chr8	60855092	60856887	chr8:60855092-60856887	0	+	60855092	60855092	8553170	3	117,228,443,	0,882,1352,
#Partially deleted in new
chr8	60856856	60861378	chr8:60856856-60861378	0	+	60856856	60856856	8553170	2	32,475,	0,4047,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	60860903	60865125	chr8:60860903-60865125	0	+	60860903	60860903	8553170	1	4222,	0,
#Partially deleted in new
chr8	60861943	60865133	chr8:60861943-60865133	0	+	60861943	60861943	8553170	3	393,105,118,	0,604,3072,
#Partially deleted in new
chr8	60862530	60865459	chr8:60862530-60865459	0	+	60862530	60862530	8553170	2	122,444,	0,2485,
#Deleted in new
chr8	60906058	60906452	chr8:60906058-60906452	7	+	60906058	60906058	16724991	1	394,	0,
#Partially deleted in new
chr8	60910589	60963425	chr8:60910589-60963425	3	+	60910589	60910589	8553170	5	77,70,253,106,74,	0,8391,9580,42340,52762,
#Deleted in new
chr8	60937704	60939871	chr8:60937704-60939871	7	-	60937704	60937704	16724991	1	2167,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	60965801	60967775	chr8:60965801-60967775	3	-	60965801	60965801	789624	2	656,203,	0,1771,
#Partially deleted in new
chr8	61057157	61300064	chr8:61057157-61300064	0	+	61299827	61300064	789624	3	73,91,388,	0,74612,242519,
#Partially deleted in new
chr8	61202349	61203220	chr8:61202349-61203220	7	+	61202349	61202349	16724991	1	871,	0,
#Partially deleted in new
chr8	61287954	61501627	chr8:61287954-61501627	1	+	61299827	61499542	789624	7	184,137,606,175,111,236,2173,	0,4363,11722,88650,166186,170352,211500,
#Partially deleted in new
chr8	61287971	61501645	chr8:61287971-61501645	3	+	61299827	61499542	789624	6	167,606,175,111,236,2191,	0,11705,88633,166169,170335,211483,
#Partially deleted in new
chr8	61287971	61501645	chr8:61287971-61501645	1	+	61458402	61499542	789624	5	167,175,111,236,2191,	0,88633,166169,170335,211483,
#Partially deleted in new
chr8	61287971	61299858	chr8:61287971-61299858	0	+	61299827	61299858	789624	3	263,137,182,	0,4346,11705,
#Partially deleted in new
chr8	61287979	61378375	chr8:61287979-61378375	0	+	61287979	61287979	8553170	3	159,602,1771,	0,11697,88625,
#Deleted in new
chr8	61300163	61301069	chr8:61300163-61301069	3	-	61300163	61300163	8553170	2	430,149,	0,757,
#Deleted in new
chr8	61300518	61301018	chr8:61300518-61301018	0	-	61300518	61300518	8553170	2	75,199,	0,301,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	61370345	61458408	chr8:61370345-61458408	0	+	61458402	61458408	8553170	4	321,175,111,102,	0,6259,83795,87961,
#Partially deleted in new
chr8	61376605	61499492	chr8:61376605-61499492	0	+	61458402	61499492	789624	5	174,102,111,236,38,	0,14522,77535,81701,122849,
#Partially deleted in new
chr8	61391005	61454228	chr8:61391005-61454228	0	+	61391005	61391005	8553170	2	224,88,	0,63135,
#Partially deleted in new
chr8	61454141	61458660	chr8:61454141-61458660	0	+	61454141	61454141	8553170	2	110,354,	0,4165,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	61464570	61501200	chr8:61464570-61501200	0	+	61464570	61464570	8553170	2	1234,1746,	0,34884,
#Partially deleted in new
chr8	61500555	61714559	chr8:61500555-61714559	3	-	61503358	61714371	0	25	2954,134,92,136,138,90,99,137,151,87,86,42,45,57,42,33,48,57,33,129,75,93,69,150,291,	0,16972,17476,25421,47515,52475,55368,62188,66612,76216,83388,118422,133127,137391,137766,142332,142830,143389,144044,146194,150494,153012,180412,183483,213713,
#Partially deleted in new
chr8	61503115	61689805	chr8:61503115-61689805	1	-	61503358	61689688	0	25	394,134,92,136,138,90,99,137,151,87,86,42,45,57,42,33,48,57,33,129,75,93,69,150,133,	0,14412,14916,22861,44955,49915,52808,59628,64052,73656,80828,115862,130567,134831,135206,139772,140270,140829,141484,143634,147934,150452,177852,180923,186557,
#Partially deleted in new
chr8	61517012	61526086	chr8:61517012-61526086	0	-	61517012	61517012	8553170	3	649,92,110,	0,1019,8964,
#Partially deleted in new
chr8	61567256	61651086	chr8:61567256-61651086	0	-	61567256	61651086	789624	11	62,87,86,45,57,42,33,48,57,33,37,	0,9515,16687,66426,70690,71065,75631,76129,76688,77343,83793,
#Partially deleted in new
chr8	61576600	61637999	chr8:61576600-61637999	0	-	61576600	61576600	8553170	5	258,86,42,45,53,	0,7343,42377,57082,61346,
#Partially deleted in new
chr8	61576771	61689811	chr8:61576771-61689811	0	-	61576771	61689688	789624	5	87,86,69,150,139,	0,7172,104196,107267,112901,
#Partially deleted in new
chr8	61578219	61579668	chr8:61578219-61579668	7	+	61578219	61578219	16724991	1	1449,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	61582998	61643417	chr8:61582998-61643417	0	-	61582998	61582998	8553170	8	537,86,42,45,57,39,33,32,	0,945,35979,50684,54948,55323,59889,60387,
#Partially deleted in new
chr8	61583943	61680999	chr8:61583943-61680999	0	-	61583943	61680999	789624	10	86,57,42,33,48,57,33,75,93,32,	0,54003,54378,58944,59442,60001,60656,67106,69624,97024,
#Partially deleted in new
chr8	61606460	61646807	chr8:61606460-61646807	1	-	61607245	61646807	789624	10	862,42,45,57,42,33,48,57,33,58,	0,12517,27222,31486,31861,36427,36925,37484,38139,40289,
#Partially deleted in new
chr8	61623709	61714596	chr8:61623709-61714596	1	-	61626272	61714371	0	14	2571,45,57,42,33,48,57,33,129,75,93,69,150,328,	0,9973,14237,14612,19178,19676,20235,20890,23040,27340,29858,57258,60329,90559,
#Partially deleted in new
chr8	61623709	61714640	chr8:61623709-61714640	1	-	61626272	61714371	0	13	2571,45,57,42,33,48,33,129,75,93,69,150,372,	0,9973,14237,14612,19178,19676,20890,23040,27340,29858,57258,60329,90559,
#Partially deleted in new
chr8	61624536	61714525	chr8:61624536-61714525	1	-	61626272	61714371	789624	15	1744,45,57,39,33,48,57,33,129,75,93,69,45,150,257,	0,9146,13410,13785,18351,18849,19408,20063,22213,26513,29031,56431,57902,59502,89732,
#Partially deleted in new
chr8	61624538	61714568	chr8:61624538-61714568	1	-	61626272	61714371	0	13	1742,45,57,42,33,48,57,33,75,93,69,150,300,	0,9144,13408,13783,18349,18847,19406,20061,26511,29029,56429,59500,89730,
#Partially deleted in new
chr8	61624602	61689779	chr8:61624602-61689779	1	-	61626272	61689688	0	15	1678,45,57,39,33,48,57,33,129,75,93,69,45,150,107,	0,9080,13344,13719,18285,18783,19342,19997,22147,26447,28965,56365,57836,59436,65070,
#Partially deleted in new
chr8	61625305	61689768	chr8:61625305-61689768	1	-	61626272	61689688	0	15	975,45,57,42,33,48,57,33,129,75,93,69,45,150,96,	0,8377,12641,13016,17582,18080,18639,19294,21444,25744,28262,55662,57133,58733,64367,
#Partially deleted in new
chr8	61625644	61638046	chr8:61625644-61638046	0	-	61625644	61625644	8553170	3	636,45,100,	0,8038,12302,
#Partially deleted in new
chr8	61625909	61689812	chr8:61625909-61689812	1	-	61626272	61689688	0	14	371,45,57,42,33,48,57,33,75,93,69,45,150,140,	0,7773,12037,12412,16978,17476,18035,18690,25140,27658,55058,56529,58129,63763,
#Partially deleted in new
chr8	61626140	61646872	chr8:61626140-61646872	0	-	61626272	61646872	789624	8	140,45,57,33,48,57,33,123,	0,7542,11806,16747,17245,17804,18459,20609,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	61631679	61632012	chr8:61631679-61632012	3	-	61631679	61631679	8553170	1	333,	0,
#Partially deleted in new
chr8	61633124	61637986	chr8:61633124-61637986	0	-	61633326	61637986	789624	3	252,45,40,	0,558,4822,
#Partially deleted in new
chr8	61637968	61689849	chr8:61637968-61689849	0	-	61637968	61689688	789624	10	35,42,33,48,33,75,93,69,150,177,	0,353,4919,5417,6631,13081,15599,42999,46070,51704,
#Partially deleted in new
chr8	61644599	61651431	chr8:61644599-61651431	0	-	61644599	61644599	8553170	3	33,129,382,	0,2150,6450,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	61656127	61714587	chr8:61656127-61714587	1	-	61661906	61714371	789624	4	5799,69,150,319,	0,24840,27911,58141,
#Partially deleted in new
chr8	61661813	61684700	chr8:61661813-61684700	0	-	61661813	61661813	8553170	4	113,69,150,216,	0,19154,22225,22671,
#Partially deleted in new
chr8	61664724	61689774	chr8:61664724-61689774	1	-	61665250	61689688	0	6	882,42,69,45,150,102,	0,3509,16243,17714,19314,24948,
#Partially deleted in new
chr8	61665139	61689786	chr8:61665139-61689786	1	-	61665250	61689688	0	5	467,42,69,150,114,	0,3094,15828,18899,24533,
#Partially deleted in new
chr8	61675258	61714546	chr8:61675258-61714546	1	-	61676074	61714371	0	5	1061,69,45,150,278,	0,5709,7180,8780,39010,
#Partially deleted in new
chr8	61675877	61689775	chr8:61675877-61689775	1	-	61676074	61689688	789624	5	442,69,45,150,103,	0,5090,6561,8161,13795,
#Partially deleted in new
chr8	61680523	61684190	chr8:61680523-61684190	0	-	61680523	61680523	8553170	2	513,152,	0,3515,
#Partially deleted in new
chr8	61683552	61689699	chr8:61683552-61689699	0	-	61683552	61683552	8553170	2	636,27,	0,6120,
#Deleted in new
chr8	61687414	61689715	chr8:61687414-61689715	0	-	61687414	61687414	8553170	2	286,43,	0,2258,
#Deleted in new
chr8	61714787	61714859	chr8:61714787-61714859	3	+	61714787	61714787	5263520	1	72,	0,
#Partially deleted in new
chr8	61759093	61765969	chr8:61759093-61765969	3	-	61759093	61759093	8553170	2	2671,79,	0,6797,
#Partially deleted in new
chr8	61785046	61852765	chr8:61785046-61852765	1	+	61785046	61785046	8553170	4	110,195,124,107,	0,40291,49826,67612,
#Partially deleted in new
chr8	61825327	61852705	chr8:61825327-61852705	1	+	61825327	61825327	8553170	4	205,159,124,47,	0,2491,9545,27331,
#Partially deleted in new
chr8	61825436	61922823	chr8:61825436-61922823	2	+	61825436	61825436	8553170	4	96,124,118,134,	0,9436,27222,97253,
#Partially deleted in new
chr8	61825468	61874179	chr8:61825468-61874179	0	+	61825468	61825468	8553170	4	64,124,118,124,	0,9404,27190,48587,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	61834916	61855852	chr8:61834916-61855852	1	+	61834916	61834916	8553170	4	80,118,52,189,	0,17742,19466,20747,
#Partially deleted in new
chr8	61834947	61894735	chr8:61834947-61894735	1	+	61834947	61834947	8553170	4	49,118,89,250,	0,17711,44741,59538,
#Partially deleted in new
chr8	61834955	61939534	chr8:61834955-61939534	0	+	61834955	61834955	8553170	3	41,118,198,	0,17703,104381,
#Partially deleted in new
chr8	61852652	61885559	chr8:61852652-61885559	0	+	61852652	61852652	8553170	2	124,274,	0,32633,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	61852653	61862040	chr8:61852653-61862040	0	+	61852653	61852653	8553170	2	123,271,	0,9116,
#Partially deleted in new
chr8	61878881	61885562	chr8:61878881-61885562	1	+	61878881	61878881	8553170	2	896,277,	0,6404,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	61909983	61910802	chr8:61909983-61910802	7	-	61909983	61909983	16724991	1	819,	0,
#Deleted in new
chr8	62110523	62111202	chr8:62110523-62111202	5	+	62110523	62110523	16724991	1	679,	0,
#Partially deleted in new
chr8	62111051	62119898	chr8:62111051-62119898	7	+	62111051	62111051	16724991	3	45,151,153,	0,717,8694,
#Deleted in new
chr8	62143310	62144769	chr8:62143310-62144769	7	-	62143310	62143310	16724991	1	1459,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	62191087	62249879	chr8:62191087-62249879	3	-	62191087	62191087	8553170	4	1953,44,244,423,	0,2148,4262,58369,
#Partially deleted in new
chr8	62248590	62965629	chr8:62248590-62965629	0	+	62248590	62248590	8553170	8	288,155,138,81,198,61,71,276,	0,382,330948,341123,498341,669862,705311,716763,
#Partially deleted in new
chr8	62248668	62863498	chr8:62248668-62863498	0	+	62248668	62248668	8553170	5	459,138,81,198,238,	0,330870,341045,498263,614592,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	62248941	62999652	chr8:62248941-62999652	3	+	62249073	62990229	789624	7	186,138,81,198,61,902,422,	0,330597,340772,497990,669511,741226,750289,
#Partially deleted in new
chr8	62248962	62747042	chr8:62248962-62747042	0	+	62249073	62747042	789624	3	165,138,111,	0,330576,497969,
#Partially deleted in new
chr8	62473216	62474269	chr8:62473216-62474269	3	-	62473216	62473216	8553170	2	214,299,	0,754,
#Deleted in new
chr8	62482197	62483811	chr8:62482197-62483811	7	-	62482197	62482197	16724991	1	1614,	0,
#Partially deleted in new
chr8	62855067	62857134	chr8:62855067-62857134	7	-	62855067	62855067	16724991	1	2067,	0,
#Deleted in new
chr8	62863081	62864181	chr8:62863081-62864181	7	-	62863081	62863081	16724991	1	1100,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	62977860	62981750	chr8:62977860-62981750	0	+	62977860	62977860	8553170	1	3890,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	62977860	62984900	chr8:62977860-62984900	3	+	62977860	62977860	789624	1	7040,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	63013067	63014681	chr8:63013067-63014681	3	+	63013067	63013067	8553170	2	27,523,	0,1091,
#Partially deleted in new
chr8	63015078	63026233	chr8:63015078-63026233	0	-	63015078	63015078	8553170	4	375,138,107,76,	0,2414,9001,11079,
#Partially deleted in new
chr8	63015084	63039171	chr8:63015084-63039171	3	-	63015331	63038768	0	9	369,138,91,107,139,85,51,115,512,	0,2408,8822,8995,11073,12096,15082,20571,23575,
#Partially deleted in new
chr8	63015428	63017970	chr8:63015428-63017970	0	-	63015428	63015428	8553170	2	25,478,	0,2064,
#Partially deleted in new
chr8	63017333	63038801	chr8:63017333-63038801	0	-	63017333	63017333	8553170	7	297,280,139,85,51,115,142,	0,6573,8824,9847,12833,18322,21326,
#Partially deleted in new
chr8	63023508	63030216	chr8:63023508-63030216	0	-	63023508	63023508	8553170	6	231,91,107,139,85,50,	0,398,571,2649,3672,6658,
#Partially deleted in new
chr8	63024371	63025294	chr8:63024371-63025294	3	+	63024371	63024371	8553170	2	620,47,	0,876,
#Partially deleted in new
chr8	63026999	63038801	chr8:63026999-63038801	0	-	63026999	63026999	8553170	4	266,51,115,142,	0,3167,8656,11660,
#Deleted in new
chr8	63027193	63028485	chr8:63027193-63028485	0	-	63027193	63027193	8553170	2	72,341,	0,951,
#Partially deleted in new
chr8	63029983	63038802	chr8:63029983-63038802	0	-	63029983	63029983	8553170	3	234,115,143,	0,5672,8676,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	63059782	63086053	chr8:63059782-63086053	3	-	63061251	63086021	0	5	1643,111,194,154,236,	0,4423,6121,13152,26035,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	63136222	63138084	chr8:63136222-63138084	7	-	63136222	63136222	16724991	2	680,726,	0,1136,
#Deleted in new
chr8	63167724	63168442	chr8:63167724-63168442	3	-	63167724	63167724	789624	1	718,	0,
#Partially deleted in new
chr8	63168552	63212786	chr8:63168552-63212786	1	+	63168877	63209706	789624	5	349,25,86,1599,3104,	0,834,6778,17594,41130,
#Partially deleted in new
chr8	63168552	63212785	chr8:63168552-63212785	3	+	63186164	63209706	789624	4	349,25,1599,3103,	0,834,17594,41130,
#Partially deleted in new
chr8	63168552	63212785	chr8:63168552-63212785	1	+	63186164	63209706	789624	6	349,25,31,86,1599,3103,	0,834,5098,6778,17594,41130,
#Deleted in new
chr8	63168561	63169491	chr8:63168561-63169491	0	+	63168561	63168561	8553170	2	340,105,	0,825,
#Partially deleted in new
chr8	63168620	63175700	chr8:63168620-63175700	0	+	63168620	63168620	8553170	3	281,25,370,	0,766,6710,
#Partially deleted in new
chr8	63168651	63210115	chr8:63168651-63210115	1	+	63168877	63209706	789624	5	250,25,80,1599,433,	0,735,6685,17495,41031,
#Partially deleted in new
chr8	63168653	63212445	chr8:63168653-63212445	1	+	63168877	63209706	789624	4	248,25,86,2763,	0,733,6677,41029,
#Partially deleted in new
chr8	63168654	63212786	chr8:63168654-63212786	0	+	63168877	63175376	789624	6	247,25,31,86,1599,3104,	0,732,4996,6676,17492,41028,
#Partially deleted in new
chr8	63168660	63209955	chr8:63168660-63209955	1	+	63172740	63209706	789624	6	241,25,146,86,1599,273,	0,726,3992,6670,17486,41022,
#Partially deleted in new
chr8	63168686	63186499	chr8:63168686-63186499	0	+	63186164	63186499	789624	3	215,25,353,	0,700,17460,
#Partially deleted in new
chr8	63168960	63186261	chr8:63168960-63186261	0	+	63172740	63186261	789624	5	48,25,146,86,115,	0,426,3692,6370,17186,
#Partially deleted in new
chr8	63169002	63186471	chr8:63169002-63186471	0	+	63186164	63186471	789624	4	109,25,86,325,	0,384,6328,17144,
#Partially deleted in new
chr8	63169002	63210167	chr8:63169002-63210167	1	+	63186164	63209706	789624	5	103,23,86,1599,485,	0,386,6328,17144,40680,
#Partially deleted in new
chr8	63169019	63186360	chr8:63169019-63186360	0	+	63172740	63186360	789624	5	92,25,146,86,214,	0,367,3633,6311,17127,
#Partially deleted in new
chr8	63169021	63210105	chr8:63169021-63210105	1	+	63172740	63209706	789624	6	84,25,146,86,1599,423,	0,365,3631,6309,17125,40661,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	63187529	63189042	chr8:63187529-63189042	0	+	63187529	63187529	8553170	2	216,308,	0,1205,
#Deleted in new
chr8	63215980	63218034	chr8:63215980-63218034	3	+	63215980	63215980	8553170	1	2054,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	63234633	63234911	chr8:63234633-63234911	3	-	63234633	63234633	8553170	1	278,	0,
#Partially deleted in new
chr8	63384838	63417930	chr8:63384838-63417930	1	-	63384838	63384838	8553170	4	1068,62,141,491,	0,26069,28272,32601,
#Partially deleted in new
chr8	63385608	63461550	chr8:63385608-63461550	0	-	63385608	63385608	8553170	3	298,62,72,	0,25299,75870,
#Partially deleted in new
chr8	63385862	63417355	chr8:63385862-63417355	0	-	63385862	63385862	8553170	4	44,62,141,253,	0,25045,27248,31240,
#Deleted in new
chr8	63409063	63409457	chr8:63409063-63409457	7	+	63409063	63409063	16724991	1	394,	0,
#Partially deleted in new
chr8	63413632	63470199	chr8:63413632-63470199	3	-	63413632	63413632	8553170	4	85,191,65,221,	0,3470,47846,56346,
#Partially deleted in new
chr8	63432885	63470205	chr8:63432885-63470205	0	-	63432885	63432885	8553170	4	66,187,65,223,	0,937,28593,37097,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	63465848	63475482	chr8:63465848-63475482	3	+	63465848	63465848	789624	4	149,2805,133,135,	0,1293,6521,9499,
#Deleted in new
chr8	63466224	63470124	chr8:63466224-63470124	0	-	63466224	63466224	8553170	2	275,142,	0,3758,
#Deleted in new
chr8	63470284	63472648	chr8:63470284-63472648	0	+	63470284	63470284	8553170	3	138,52,263,	0,1554,2101,
#Deleted in new
chr8	63470327	63472644	chr8:63470327-63472644	0	+	63470327	63470327	8553170	2	332,275,	0,2042,
#Deleted in new
chr8	63609353	63609600	chr8:63609353-63609600	3	-	63609353	63609353	8553170	1	247,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	63687178	64368558	chr8:63687178-64368558	0	-	63687178	63687178	8553170	6	53,99,67,72,64,218,	0,161718,446269,463914,543377,681162,
#Partially deleted in new
chr8	63704755	63751677	chr8:63704755-63751677	3	+	63704755	63704755	8553170	4	163,150,150,103,	0,2569,42850,46819,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	63769429	63785501	chr8:63769429-63785501	3	+	63769429	63769429	789624	3	416,2474,822,	0,9019,15250,
#Partially deleted in new
chr8	63856251	64272543	chr8:63856251-64272543	1	-	63856251	63856251	8553170	5	860,67,72,64,31,	0,277196,294841,374304,416261,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	64151105	64240282	chr8:64151105-64240282	0	-	64151105	64151105	8553170	3	59,61,449,	0,79450,88728,
#Deleted in new
chr8	64331926	64332152	chr8:64331926-64332152	7	+	64331926	64331926	16724991	1	226,	0,
#Deleted in new
chr8	64373327	64378834	chr8:64373327-64378834	0	+	64373327	64373327	789624	2	224,776,	0,4731,
#Deleted in new
chr8	64373327	64383787	chr8:64373327-64383787	3	+	64373327	64373327	789624	3	224,431,2185,	0,4731,8275,
#Deleted in new
chr8	64377326	64378435	chr8:64377326-64378435	0	+	64377326	64377326	789624	2	155,377,	0,732,
#Deleted in new
chr8	64377332	64378478	chr8:64377332-64378478	0	+	64377332	64377332	789624	2	196,420,	0,726,
#Deleted in new
chr8	64377959	64383286	chr8:64377959-64383286	0	+	64377959	64377959	8553170	2	530,1684,	0,3643,
#Deleted in new
chr8	64379148	64379257	chr8:64379148-64379257	3	+	64379148	64379148	5263520	1	109,	0,
#Deleted in new
chr8	64554235	64554475	chr8:64554235-64554475	7	-	64554235	64554235	16724991	1	240,	0,
#Deleted in new
chr8	64570912	64571332	chr8:64570912-64571332	7	-	64570912	64570912	16724991	1	420,	0,
#Deleted in new
chr8	64574305	64577263	chr8:64574305-64577263	3	-	64574305	64574305	789624	2	2323,381,	0,2577,
#Deleted in new
chr8	64574310	64581888	chr8:64574310-64581888	0	-	64574310	64574310	789624	2	2318,171,	0,7407,
#Deleted in new
chr8	64580366	64583628	chr8:64580366-64583628	3	+	64580790	64581936	789624	1	3262,	0,
#Partially deleted in new
chr8	64587762	64615814	chr8:64587762-64615814	0	-	64587762	64587762	8553170	5	37,43,176,207,124,	0,2039,16919,27263,27928,
#Partially deleted in new
chr8	64596134	64798761	chr8:64596134-64798761	3	-	64596641	64798587	789624	6	795,176,207,591,137,296,	0,8547,18891,19556,28268,202331,
#Partially deleted in new
chr8	64973487	64973848	chr8:64973487-64973848	7	-	64973487	64973487	16724991	1	361,	0,
#Deleted in new
chr8	65155406	65155778	chr8:65155406-65155778	7	+	65155406	65155406	16724991	1	372,	0,
#Partially deleted in new
chr8	65161144	65180341	chr8:65161144-65180341	1	-	65161144	65161144	789624	4	625,179,107,144,	0,11189,14528,19053,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	65167732	65184210	chr8:65167732-65184210	3	-	65167732	65167732	8553170	7	639,179,107,143,112,108,129,	0,4601,7940,12465,15011,15663,16349,
#Deleted in new
chr8	65377591	65378111	chr8:65377591-65378111	7	+	65377591	65377591	16724991	1	520,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	65527007	65562780	chr8:65527007-65562780	3	-	65527007	65527007	789624	5	578,34,1710,137,175,	0,3568,4407,7720,35598,
#Deleted in new
chr8	65591849	65592472	chr8:65591849-65592472	3	-	65591849	65591849	8553170	1	623,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	65592730	65592820	chr8:65592730-65592820	3	+	65592730	65592730	8553170	1	90,	0,
#Partially deleted in new
chr8	65602455	65634207	chr8:65602455-65634207	3	-	65604393	65627398	789624	7	2130,75,117,190,92,218,210,	0,2807,2966,10788,19807,24760,31542,
#Partially deleted in new
chr8	65602458	65634217	chr8:65602458-65634217	1	-	65604393	65627282	789624	6	2127,75,117,92,218,220,	0,2804,2963,19804,24757,31539,
#Partially deleted in new
chr8	65604374	65634171	chr8:65604374-65634171	0	-	65605504	65627398	789624	6	211,75,117,92,218,174,	0,888,1047,17888,22841,29623,
#Partially deleted in new
chr8	65605432	65634162	chr8:65605432-65634162	0	-	65605432	65627398	789624	5	106,190,92,218,444,	0,7811,16830,21783,28286,
#Partially deleted in new
chr8	65613337	65634177	chr8:65613337-65634177	0	-	65613337	65627398	789624	5	96,92,218,100,180,	0,8925,13878,19560,20660,
#Partially deleted in new
chr8	65613337	65634190	chr8:65613337-65634190	0	-	65613337	65613337	8553170	3	96,218,193,	0,13878,20660,
#Partially deleted in new
chr8	65644733	65704826	chr8:65644733-65704826	0	+	65644733	65644733	8553170	5	51,146,124,116,133,	0,25139,37594,48910,59960,
#Partially deleted in new
chr8	65644733	65704747	chr8:65644733-65704747	0	+	65644733	65644733	8553170	7	51,146,37,99,34,116,54,	0,25139,37310,37619,44832,48910,59960,
#Partially deleted in new
chr8	65644733	65704823	chr8:65644733-65704823	0	+	65669952	65689571	789624	6	51,146,99,34,116,130,	0,25139,37619,44832,48910,59960,
#Partially deleted in new
chr8	65644738	65710556	chr8:65644738-65710556	3	+	65669952	65709044	789624	8	46,146,99,116,236,247,169,1581,	0,25134,37614,48905,59955,62271,63104,64237,
#Partially deleted in new
chr8	65644738	65708338	chr8:65644738-65708338	0	+	65644738	65644738	8553170	7	46,146,99,116,236,247,496,	0,25134,37614,48905,59955,62271,63104,
#Partially deleted in new
chr8	65669870	65707976	chr8:65669870-65707976	0	+	65669870	65669870	8553170	7	148,37,99,116,236,247,134,	0,12173,12482,23773,34823,37139,37972,
#Partially deleted in new
chr8	65669872	65710561	chr8:65669872-65710561	1	+	65669952	65709044	789624	6	146,116,236,247,169,1586,	0,23771,34821,37137,37970,39103,
#Partially deleted in new
chr8	65669980	65710562	chr8:65669980-65710562	0	+	65669980	65709044	789624	6	38,116,236,247,169,1587,	0,23663,34713,37029,37862,38995,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	65679502	65704837	chr8:65679502-65704837	0	+	65679502	65679502	8553170	5	148,99,34,116,144,	0,2850,10063,14141,25191,
#Partially deleted in new
chr8	65707044	65771261	chr8:65707044-65771261	0	+	65707044	65719433	789624	4	212,169,102,315,	0,798,12335,63902,
#Partially deleted in new
chr8	65707052	65771252	chr8:65707052-65771252	0	+	65707052	65771129	789624	3	204,169,306,	0,790,63894,
#Partially deleted in new
chr8	65707220	65719748	chr8:65707220-65719748	0	+	65707220	65707220	8553170	3	36,169,369,	0,622,12159,
#Partially deleted in new
chr8	65707856	65725600	chr8:65707856-65725600	0	+	65707856	65707856	8553170	3	155,102,285,	0,11523,17459,
#Partially deleted in new
chr8	65707889	65720596	chr8:65707889-65720596	0	+	65707889	65707889	8553170	3	122,102,193,	0,11490,12514,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	65714333	65714778	chr8:65714333-65714778	3	-	65714333	65714333	8553170	1	445,	0,
#Partially deleted in new
chr8	65717509	65841952	chr8:65717509-65841952	1	-	65719289	65841508	0	13	1986,81,97,145,92,132,101,96,64,152,84,61,582,	0,6031,6745,7267,9365,9660,17284,21992,27897,30142,62210,65273,123861,
#Partially deleted in new
chr8	65718378	65789084	chr8:65718378-65789084	3	-	65719289	65788941	0	13	1117,81,97,145,92,132,101,96,64,152,84,61,203,	0,5162,5876,6398,8496,8791,16415,21123,27028,29273,61341,64404,70503,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	65721797	65841508	chr8:65721797-65841508	1	-	65723508	65841508	0	12	1824,97,145,92,132,101,96,64,152,84,61,138,	0,2457,2979,5077,5372,12996,17704,23609,25854,57922,60985,119573,
#Deleted in new
chr8	65725350	65728603	chr8:65725350-65728603	0	+	65725350	65725350	8553170	2	163,243,	0,3010,
#Deleted in new
chr8	65726873	65728157	chr8:65726873-65728157	0	-	65726873	65726873	8553170	2	93,988,	0,296,
#Partially deleted in new
chr8	65726909	65765672	chr8:65726909-65765672	0	-	65726909	65726909	8553170	8	57,132,71,101,96,64,152,129,	0,260,4651,7884,12592,18497,20742,38634,
#Partially deleted in new
chr8	65747704	65842088	chr8:65747704-65842088	0	-	65747704	65747704	8553170	6	99,84,104,61,97,240,	0,32015,33139,35078,93666,94144,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	65747751	65838748	chr8:65747751-65838748	0	-	65747751	65788941	789624	5	52,84,61,100,275,	0,31968,35031,41130,90722,
#Partially deleted in new
chr8	65747764	65842322	chr8:65747764-65842322	0	-	65747764	65747764	8553170	5	39,84,61,97,241,	0,31955,35018,93606,94317,
#Deleted in new
chr8	65842751	65843331	chr8:65842751-65843331	3	+	65842751	65842751	8553170	1	580,	0,
#Partially deleted in new
chr8	66021559	66100526	chr8:66021559-66100526	3	+	66051547	66100031	789624	6	146,124,136,214,172,590,	0,21928,29971,55100,58817,78377,
#Partially deleted in new
chr8	66021559	66080465	chr8:66021559-66080465	0	+	66021559	66021559	8553170	4	146,124,214,89,	0,21928,55100,58817,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	66021613	66100134	chr8:66021613-66100134	0	+	66021613	66021613	8553170	7	92,124,136,1544,214,172,198,	0,21874,29917,34852,55046,58763,78323,
#Partially deleted in new
chr8	66043476	66076829	chr8:66043476-66076829	0	+	66051547	66076829	789624	3	135,136,170,	0,8054,33183,
#Partially deleted in new
chr8	66112666	66114779	chr8:66112666-66114779	0	+	66112666	66112666	8553170	2	233,218,	0,1895,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	66113286	66115207	chr8:66113286-66115207	3	+	66113286	66113286	8553170	2	310,646,	0,1275,
#Partially deleted in new
chr8	66126895	66175487	chr8:66126895-66175487	3	+	66127268	66174593	789624	10	541,173,166,96,234,23,125,251,288,1017,	0,1408,8094,10199,22749,23321,23446,25481,27151,47575,
#Partially deleted in new
chr8	66126895	66175485	chr8:66126895-66175485	1	+	66127268	66174593	789624	9	541,173,166,96,234,23,125,251,1015,	0,1408,8094,10199,22749,23321,23446,25481,47575,
#Partially deleted in new
chr8	66127042	66174592	chr8:66127042-66174592	1	+	66127268	66174481	789624	11	394,173,166,96,234,23,125,251,288,88,122,	0,1261,7947,10052,22602,23174,23299,25334,27004,28580,47428,
#Partially deleted in new
chr8	66127042	66174818	chr8:66127042-66174818	1	+	66127268	66174593	789624	5	394,173,166,96,348,	0,1261,7947,10052,47428,
#Partially deleted in new
chr8	66152297	66175005	chr8:66152297-66175005	0	+	66152297	66152297	8553170	2	330,535,	0,22173,
#Deleted in new
chr8	66176381	66178725	chr8:66176381-66178725	3	-	66176886	66177477	0	2	1110,433,	0,1911,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	66192092	66193287	chr8:66192092-66193287	1	+	66192092	66192092	8553170	3	106,139,26,	0,740,1169,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	66192110	66197315	chr8:66192110-66197315	1	+	66192110	66192110	789624	3	857,54,591,	0,1147,4614,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	66192114	66193297	chr8:66192114-66193297	3	+	66192114	66192114	8553170	3	84,135,40,	0,718,1143,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	66192708	66196390	chr8:66192708-66196390	1	+	66192708	66192708	8553170	4	259,54,104,375,	0,549,1703,3307,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	66419588	66428977	chr8:66419588-66428977	3	-	66419588	66419588	789624	3	4194,136,36,	0,6453,9353,
#Deleted in new
chr8	66429027	66430733	chr8:66429027-66430733	3	+	66429131	66430229	789624	1	1706,	0,
#Partially deleted in new
chr8	66430184	66445324	chr8:66430184-66445324	3	+	66444417	66445324	789624	5	194,47,54,155,107,	0,12613,14182,14409,15033,
#Partially deleted in new
chr8	66432485	66468907	chr8:66432485-66468907	3	+	66432516	66468352	789624	14	90,38,47,54,155,197,78,106,153,99,79,97,158,639,	0,7676,10312,11881,12108,12732,14778,16379,19467,21573,24331,24584,27822,35783,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr8	66432485	66518524	chr8:66432485-66518524	3	+	66444366	66453734	789624	20	90,54,155,197,78,106,153,131,99,79,97,158,189,153,160,56,154,62,98,2632,	0,11881,12108,12732,14778,16379,19467,21224,21573,24331,24584,27822,38944,41300,42307,63951,72889,77610,81054,83407,
#Partially deleted in new
chr8	66432491	66468809	chr8:66432491-66468809	1	+	66444366	66468352	789624	15	84,70,38,47,54,155,197,78,106,153,99,79,97,158,541,	0,6744,7670,10306,11875,12102,12726,14772,16373,19461,21567,24325,24578,27816,35777,
#Partially deleted in new
chr8	66432497	66468809	chr8:66432497-66468809	0	+	66432516	66453734	789624	14	78,38,47,54,155,197,78,106,153,448,79,97,158,541,	0,7664,10300,11869,12096,12720,14766,16367,19455,21212,24319,24572,27810,35771,
#Partially deleted in new
chr8	66432498	66468807	chr8:66432498-66468807	0	+	66432516	66444386	789624	13	77,38,54,155,197,78,106,153,99,79,97,158,539,	0,7663,11868,12095,12719,14765,16366,19454,21560,24318,24571,27809,35770,
#Partially deleted in new
chr8	66432499	66454008	chr8:66432499-66454008	0	+	66432516	66447291	789624	9	76,38,47,54,155,78,106,153,299,	0,7662,10298,11867,12094,14764,16365,19453,21210,
#Partially deleted in new
chr8	66432500	66468809	chr8:66432500-66468809	0	+	66432516	66444386	789624	13	75,38,54,155,197,78,106,153,448,79,97,158,541,	0,7661,11866,12093,12717,14763,16364,19452,21209,24316,24569,27807,35768,
#Partially deleted in new
chr8	66432503	66468534	chr8:66432503-66468534	0	+	66432503	66432503	8553170	11	72,155,197,78,106,153,99,79,97,158,266,	0,12090,12714,14760,16361,19449,21555,24313,24566,27804,35765,
#Partially deleted in new
chr8	66432504	66454067	chr8:66432504-66454067	0	+	66432516	66448907	789624	8	71,38,47,54,155,106,153,358,	0,7657,10293,11862,12089,16360,19448,21205,
#Partially deleted in new
chr8	66432504	66445414	chr8:66432504-66445414	0	+	66432516	66442843	789624	5	71,47,54,155,197,	0,10293,11862,12089,12713,
#Partially deleted in new
chr8	66432504	66447342	chr8:66432504-66447342	0	+	66432516	66444415	789624	5	71,54,155,197,79,	0,11862,12089,12713,14759,
#Partially deleted in new
chr8	66432504	66445249	chr8:66432504-66445249	0	+	66432504	66432504	8553170	5	71,38,47,382,32,	0,7657,10293,11862,12713,
#Partially deleted in new
chr8	66432507	66452006	chr8:66432507-66452006	0	+	66432516	66444415	789624	6	68,54,155,78,106,54,	0,11859,12086,14756,16357,19445,
#Partially deleted in new
chr8	66432509	66444648	chr8:66432509-66444648	0	+	66432509	66432509	8553170	4	382,38,54,55,	0,7652,11857,12084,
#Partially deleted in new
chr8	66432512	66468809	chr8:66432512-66468809	0	+	66432516	66442843	789624	12	63,47,54,155,78,106,153,448,79,97,158,541,	0,10285,11854,12081,14751,16352,19440,21197,24304,24557,27795,35756,
#Partially deleted in new
chr8	66439267	66444681	chr8:66439267-66444681	0	+	66439267	66439267	8553170	3	468,38,315,	0,894,5099,
#Partially deleted in new
chr8	66454096	66471601	chr8:66454096-66471601	0	+	66454096	66454096	8553170	5	61,79,97,158,172,	0,2720,2973,6211,17333,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	66459523	66468664	chr8:66459523-66468664	0	+	66459523	66459523	8553170	3	55,158,396,	0,784,8745,
#Partially deleted in new
chr8	66460002	66513607	chr8:66460002-66513607	0	+	66460002	66460002	8553170	6	92,158,56,154,62,68,	0,305,36434,45372,50093,53537,
#Partially deleted in new
chr8	66460303	66515930	chr8:66460303-66515930	0	+	66460303	66460303	8553170	6	162,56,154,62,98,38,	0,36133,45071,49792,53236,55589,
#Partially deleted in new
chr8	66473783	66505468	chr8:66473783-66505468	0	+	66473783	66473783	8553170	3	155,56,94,	0,22653,31591,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	66480647	66481486	chr8:66480647-66481486	7	+	66480647	66480647	16724991	1	839,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	66493207	66518524	chr8:66493207-66518524	3	+	66493648	66516076	789624	6	511,56,154,62,98,2632,	0,3229,12167,16888,20332,22685,
#Partially deleted in new
chr8	66493519	66515978	chr8:66493519-66515978	1	+	66493648	66515919	789624	5	199,56,154,62,86,	0,2917,11855,16576,22373,
#Partially deleted in new
chr8	66493549	66503525	chr8:66493549-66503525	0	+	66493549	66493549	8553170	3	169,56,121,	0,2887,9855,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	66493560	66518524	chr8:66493560-66518524	0	+	66493648	66505329	789624	6	158,56,307,62,98,2632,	0,2876,11661,16535,19979,22332,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	66493561	66518498	chr8:66493561-66518498	0	+	66493648	66498845	789624	7	157,56,94,154,62,98,2606,	0,2875,5263,11813,16534,19978,22331,
#Partially deleted in new
chr8	66493591	66510340	chr8:66493591-66510340	0	+	66493591	66493591	8553170	4	127,56,154,245,	0,2845,11783,16504,
#Partially deleted in new
chr8	66493605	66516818	chr8:66493605-66516818	1	+	66493648	66515919	789624	5	113,56,154,98,926,	0,2831,11769,19934,22287,
#Partially deleted in new
chr8	66493626	66514040	chr8:66493626-66514040	1	+	66493648	66513641	789624	5	92,56,154,62,501,	0,2810,11748,16469,19913,
#Partially deleted in new
chr8	66493650	66514291	chr8:66493650-66514291	0	+	66493650	66493650	8553170	6	68,56,154,62,98,127,	0,2786,11724,16445,19889,20514,
#Partially deleted in new
chr8	66494543	66496494	chr8:66494543-66496494	0	+	66494543	66494543	8553170	2	478,58,	0,1893,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	66501204	66501311	chr8:66501204-66501311	3	-	66501204	66501204	8553170	1	107,	0,
#Partially deleted in new
chr8	66562174	66613249	chr8:66562174-66613249	3	-	66564696	66612838	789624	16	2651,180,105,117,115,143,369,234,105,75,175,221,93,72,106,431,	0,3889,4509,4701,10307,11189,13832,17958,30265,30945,33408,35155,36875,39523,40243,50644,
#Partially deleted in new
chr8	66564671	66613294	chr8:66564671-66613294	1	-	66564696	66612838	789624	12	154,180,105,117,115,143,127,26,93,72,106,476,	0,1392,2012,2204,7810,8692,11335,32853,34378,37026,37746,48147,
#Partially deleted in new
chr8	66564696	66612907	chr8:66564696-66612907	1	-	66564696	66612838	789624	15	129,105,117,115,143,369,234,105,75,175,221,93,72,106,89,	0,1987,2179,7785,8667,11310,15436,27743,28423,30886,32633,34353,37001,37721,48122,
#Deleted in new
chr8	66565132	66566958	chr8:66565132-66566958	0	-	66565132	66565132	8553170	3	375,105,83,	0,1551,1743,
#Partially deleted in new
chr8	66597509	66612621	chr8:66597509-66612621	0	-	66597509	66597509	8553170	5	41,93,72,106,108,	0,1540,4188,4908,15004,
#Deleted in new
chr8	66612144	66614247	chr8:66612144-66614247	0	-	66612144	66612144	8553170	1	2103,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	66628486	66667217	chr8:66628486-66667217	3	-	66634500	66666958	789624	3	6886,87,2969,	0,22971,35762,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	66653468	66653576	chr8:66653468-66653576	3	+	66653468	66653468	8553170	1	108,	0,
#Partially deleted in new
chr8	66667595	66793833	chr8:66667595-66793833	0	+	66667595	66667595	8553170	3	106,304,218,	0,12125,126020,
#Partially deleted in new
chr8	66667614	66685564	chr8:66667614-66685564	0	+	66667614	66667614	8553170	3	87,304,184,	0,12106,17766,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr8	66667615	66860472	chr8:66667615-66860472	3	+	66793736	66859581	789624	19	86,304,56,217,84,73,76,88,50,58,84,132,113,37,87,96,156,90,1062,	0,12105,23089,126000,130926,136759,146237,154756,161038,163638,168147,168327,172387,172595,173408,175836,179577,183215,191795,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	66667617	66681158	chr8:66667617-66681158	3	+	66677708	66679954	789624	3	84,313,1438,	0,10024,12103,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	66667651	66678295	chr8:66667651-66678295	1	+	66677708	66678230	789624	4	50,158,313,77,	0,9093,9990,10567,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	66676218	66681000	chr8:66676218-66681000	1	+	66677708	66679954	789624	4	66,158,313,1280,	0,526,1423,3502,
#Partially deleted in new
chr8	66679538	66685560	chr8:66679538-66685560	0	+	66679538	66679538	8553170	3	486,66,180,	0,854,5842,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr8	66712417	66860859	chr8:66712417-66860859	1	+	66793736	66859581	789624	17	416,217,84,73,76,88,50,58,84,132,113,37,87,96,156,90,1449,	0,81198,86124,91957,101435,109954,116236,118836,123345,123525,127585,127793,128606,131034,134775,138413,146993,
#Partially deleted in new
chr8	66712733	66804447	chr8:66712733-66804447	0	+	66712733	66712733	8553170	5	100,109,217,84,73,	0,77989,80882,85808,91641,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	66712776	66737666	chr8:66712776-66737666	0	+	66712776	66712776	8553170	2	57,441,	0,24449,
#Partially deleted in new
chr8	66767399	66768005	chr8:66767399-66768005	7	-	66767399	66767399	16724991	1	606,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr8	66775180	66862020	chr8:66775180-66862020	1	+	66793736	66859581	789624	17	139,217,84,73,76,88,50,58,84,132,113,37,87,96,156,90,2610,	0,18435,23361,29194,38672,47191,53473,56073,60582,60762,64822,65030,65843,68271,72012,75650,84230,
#Partially deleted in new
chr8	66775213	66831313	chr8:66775213-66831313	0	+	66804395	66831313	789624	7	106,84,73,76,88,50,60,	0,23328,29161,38639,47158,53440,56040,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr8	66775217	66860840	chr8:66775217-66860840	1	+	66793736	66859581	789624	18	102,133,217,84,73,76,88,50,58,84,132,113,37,87,96,156,90,1430,	0,2739,18398,23324,29157,38635,47154,53436,56036,60545,60725,64785,64993,65806,68234,71975,75613,84193,
#Partially deleted in new
chr8	66775223	66835794	chr8:66775223-66835794	0	+	66793736	66835794	789624	7	96,217,84,73,76,88,32,	0,18392,23318,29151,38629,47148,60539,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr8	66775226	66860455	chr8:66775226-66860455	1	+	66793736	66859581	789624	16	93,217,84,73,76,88,50,58,84,132,113,37,87,156,90,1045,	0,18389,23315,29148,38626,47145,53427,56027,60536,60716,64776,64984,65797,71966,75604,84184,
#Partially deleted in new
chr8	66775565	66822427	chr8:66775565-66822427	0	+	66793736	66822427	789624	6	71,217,84,73,76,56,	0,18050,22976,28809,38287,46806,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr8	66793613	66862022	chr8:66793613-66862022	1	+	66793736	66859581	789624	16	219,84,73,76,88,50,58,84,132,113,37,87,96,156,90,2612,	0,4928,10761,20239,28758,35040,37640,42149,42329,46389,46597,47410,49838,53579,57217,65797,
#Partially deleted in new
chr8	66804374	66836066	chr8:66804374-66836066	0	+	66822396	66836066	789624	6	73,88,50,58,84,124,	0,17997,24279,26879,31388,31568,
#Partially deleted in new
chr8	66804378	66840070	chr8:66804378-66840070	0	+	66804395	66840070	789624	6	69,76,88,84,132,68,	0,9474,17993,31384,31564,35624,
#Partially deleted in new
chr8	66839800	66843514	chr8:66839800-66843514	0	+	66839800	66839800	8553170	3	447,87,63,	0,1223,3651,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	66840679	66847255	chr8:66840679-66847255	0	+	66840679	66840679	8553170	3	431,96,63,	0,2772,6513,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr8	66870748	66901781	chr8:66870748-66901781	1	+	66874140	66901352	789624	13	83,182,131,60,196,123,105,126,238,206,167,180,576,	0,3304,3577,3778,6600,7825,8066,10100,13008,20116,25421,26031,30457,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr8	66870748	66922048	chr8:66870748-66922048	3	+	66874140	66919169	789624	15	83,182,131,60,196,123,105,126,238,206,167,180,143,110,3046,	0,3304,3577,3778,6600,7825,8066,10100,13008,20116,25421,26031,30457,34477,48254,
#Partially deleted in new
chr8	66870770	66919335	chr8:66870770-66919335	0	+	66874140	66874546	789624	14	61,197,60,196,123,105,126,238,206,167,180,143,110,333,	0,3282,3756,6578,7803,8044,10078,12986,20094,25399,26009,30435,34455,48232,
#Partially deleted in new
chr8	66870789	66884622	chr8:66870789-66884622	1	+	66874140	66884028	789624	9	42,182,131,60,196,123,105,126,866,	0,3263,3536,3737,6559,7784,8025,10059,12967,
#Partially deleted in new
chr8	66870797	66878727	chr8:66870797-66878727	0	+	66870797	66870797	8553170	5	34,182,261,196,154,	0,3255,3528,6551,7776,
#Partially deleted in new
chr8	66871501	66905363	chr8:66871501-66905363	1	+	66874140	66905355	789624	14	48,182,131,60,196,123,105,126,238,206,167,180,143,138,	0,2551,2824,3025,5847,7072,7313,9347,12255,19363,24668,25278,29704,33724,
#Partially deleted in new
chr8	66874047	66919582	chr8:66874047-66919582	0	+	66874140	66874477	789624	12	202,192,123,105,126,238,206,167,180,143,110,580,	0,347,4526,4767,6801,9709,16817,22122,22732,27158,31178,44955,
#Partially deleted in new
chr8	66921683	66925541	chr8:66921683-66925541	1	-	66921683	66921683	789624	3	431,112,105,	0,930,3753,
#Partially deleted in new
chr8	66921817	66925596	chr8:66921817-66925596	1	-	66921817	66921817	789624	4	297,69,112,160,	0,506,796,3619,
#Partially deleted in new
chr8	66921986	66925541	chr8:66921986-66925541	0	-	66921986	66921986	8553170	3	128,69,105,	0,337,3450,
#Partially deleted in new
chr8	66922017	66926398	chr8:66922017-66926398	3	-	66922017	66922017	8553170	4	97,69,112,201,	0,306,596,4180,
#Partially deleted in new
chr8	66922270	66925541	chr8:66922270-66925541	0	-	66922270	66922270	8553170	2	455,105,	0,3166,
#Deleted in new
chr8	66922466	66922555	chr8:66922466-66922555	3	-	66922466	66922466	789624	1	89,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	66946500	66962590	chr8:66946500-66962590	3	-	66948050	66961765	789624	4	1664,413,111,262,	0,14875,15376,15828,
#Partially deleted in new
chr8	66964098	66982134	chr8:66964098-66982134	0	-	66964098	66964098	8553170	3	236,47,86,	0,6995,17950,
#Partially deleted in new
chr8	66964102	67010782	chr8:66964102-67010782	0	-	66964102	66964102	8553170	4	232,47,118,68,	0,6991,24297,46612,
#Partially deleted in new
chr8	66964102	67012981	chr8:66964102-67012981	0	-	66964102	66964102	8553170	4	232,118,117,24,	0,24297,46612,48855,
#Partially deleted in new
chr8	66964102	66982187	chr8:66964102-66982187	0	-	66964102	66964102	8553170	3	232,160,139,	0,6878,17946,
#Partially deleted in new
chr8	66964199	67021345	chr8:66964199-67021345	1	-	66971012	67017747	789624	9	135,160,132,118,117,139,167,213,101,	0,6781,17849,24200,46515,48758,50226,53419,57045,
#Partially deleted in new
chr8	66964204	67014538	chr8:66964204-67014538	0	-	66964204	66964204	8553170	4	130,117,139,113,	0,46510,48753,50221,
#Partially deleted in new
chr8	66982037	67013005	chr8:66982037-67013005	0	-	66982037	66982037	8553170	4	143,118,117,48,	0,6362,28677,30920,
#Deleted in new
chr8	66984134	66986187	chr8:66984134-66986187	7	-	66984134	66984134	16724991	1	2053,	0,
#Partially deleted in new
chr8	66988130	67028551	chr8:66988130-67028551	3	-	66988382	67017747	789624	6	387,117,139,167,213,61,	0,22584,24827,26295,29488,40360,
#Partially deleted in new
chr8	67010614	67014498	chr8:67010614-67014498	0	-	67010614	67010614	8553170	3	217,139,73,	0,2343,3811,
#Partially deleted in new
chr8	67010617	67028537	chr8:67010617-67028537	0	-	67010617	67010617	8553170	3	214,139,47,	0,2340,17873,
#Partially deleted in new
chr8	67012897	67056604	chr8:67012897-67056604	0	-	67012897	67012897	8553170	4	199,213,112,86,	0,4721,38332,43621,
#Partially deleted in new
chr8	67014506	67028561	chr8:67014506-67028561	0	-	67014506	67014506	8553170	4	86,213,100,71,	0,3112,6738,13984,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	67014524	67028520	chr8:67014524-67028520	0	-	67014524	67014524	8553170	4	68,213,151,30,	0,3094,12356,13966,
#Partially deleted in new
chr8	67043078	67062317	chr8:67043078-67062317	3	-	67043232	67061996	0	8	239,149,112,86,66,129,235,464,	0,2733,8151,13440,14301,15004,16132,18775,
#Partially deleted in new
chr8	67043078	67064943	chr8:67043078-67064943	1	-	67047844	67059396	789624	9	239,149,92,112,86,66,129,235,513,	0,2733,4689,8151,13440,14301,15004,16132,21352,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	67043078	67062336	chr8:67043078-67062336	0	-	67043078	67043078	8553170	8	239,149,112,86,66,129,2814,231,	0,2733,8151,13440,14301,15004,16132,19027,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	67043078	67056560	chr8:67043078-67056560	0	-	67043078	67043078	8553170	5	239,149,175,112,42,	0,2733,4606,8151,13440,
#Partially deleted in new
chr8	67043081	67062323	chr8:67043081-67062323	0	-	67059430	67061996	789624	10	236,149,112,86,66,129,235,49,171,218,	0,2730,8148,13437,14298,15001,16129,17415,18772,19024,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	67043081	67061629	chr8:67043081-67061629	0	-	67043081	67043081	8553170	6	2879,112,86,66,129,2419,	0,8148,13437,14298,15001,16129,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	67045809	67062029	chr8:67045809-67062029	0	-	67061391	67061996	789624	8	151,112,86,66,129,235,131,176,	0,5420,10709,11570,12273,13401,15482,16044,
#Partially deleted in new
chr8	67056532	67064274	chr8:67056532-67064274	0	-	67056532	67059396	789624	5	72,66,129,235,174,	0,847,1550,2678,7568,
#Partially deleted in new
chr8	67058097	67064638	chr8:67058097-67064638	0	-	67058097	67058097	8553170	3	114,235,308,	0,1113,6233,
#Partially deleted in new
chr8	67059415	67062153	chr8:67059415-67062153	0	-	67060451	67061996	789624	4	30,225,171,48,	0,905,2438,2690,
#Partially deleted in new
chr8	67062425	67093620	chr8:67062425-67093620	0	+	67074252	67093620	789624	6	95,109,100,104,81,78,	0,11817,14056,23581,29377,31117,
#Partially deleted in new
chr8	67064367	67196263	chr8:67064367-67196263	3	+	67064398	67195593	789624	29	129,109,100,104,99,440,99,71,94,58,209,122,79,130,148,153,113,150,147,105,67,118,140,141,47,64,110,139,882,	0,9875,12114,21639,29175,30925,38669,41537,47604,49437,51546,53880,54375,67583,73088,85415,89656,94079,94623,97443,99364,100023,108048,110928,113312,115495,126282,129096,131014,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr8	67064427	67159036	chr8:67064427-67159036	0	+	67074252	67112069	789624	22	69,109,100,104,24,81,99,440,99,71,104,1460,209,122,79,72,130,148,153,113,150,46,	0,9815,12054,21579,22395,27375,29115,30865,38609,41477,47544,49377,51486,53820,54315,58660,67523,73028,85355,89596,94019,94563,
#Partially deleted in new
chr8	67083847	67195611	chr8:67083847-67195611	1	+	67095664	67195593	789624	26	491,104,99,440,99,71,94,58,209,122,79,130,148,113,150,147,105,67,118,140,141,47,64,110,139,230,	0,2159,9695,11445,19189,22057,28124,29957,32066,34400,34895,48103,53608,70176,74599,75143,77963,79884,80543,88568,91448,93832,96015,106802,109616,111534,
#Deleted in new
chr8	67099301	67099425	chr8:67099301-67099425	7	+	67099301	67099301	16724991	1	124,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	67133553	67135911	chr8:67133553-67135911	7	-	67133553	67133553	16724991	3	989,298,453,	0,1303,1905,
#Partially deleted in new
chr8	67157626	67195518	chr8:67157626-67195518	0	+	67157626	67157626	8553170	12	231,150,147,105,67,118,140,141,47,64,110,137,	0,820,1364,4184,6105,6764,14789,17669,20053,22236,33023,37755,
#Partially deleted in new
chr8	67172511	67193577	chr8:67172511-67193577	0	+	67172511	67172511	8553170	7	44,205,141,47,64,110,114,	0,257,2784,5168,7351,18138,20952,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chr8	67173510	67271708	chr8:67173510-67271708	0	-	67175554	67271708	789624	30	2062,118,139,169,140,133,73,139,136,130,131,161,173,152,170,41,91,151,159,129,152,172,85,206,112,202,109,140,100,7,	0,26885,27956,29572,31169,37972,43079,44271,44492,45920,51392,52512,53626,53936,54452,54713,59344,64832,65224,66651,77788,79940,84221,84574,86304,92495,93365,93580,93832,98191,
#Partially deleted in new
chr8	67175486	67211529	chr8:67175486-67211529	0	-	67175554	67211529	789624	6	86,118,139,169,87,47,	0,24909,25980,27596,29193,35996,
#Partially deleted in new
chr8	67197648	67343677	chr8:67197648-67343677	3	-	67198933	67343287	0	39	1450,118,139,169,140,133,73,139,136,130,131,161,173,152,170,41,91,151,159,129,152,172,85,206,112,202,109,140,100,235,134,176,111,277,180,147,157,31,514,	0,2747,3818,5434,7031,13834,18941,20133,20354,21782,27254,28374,29488,29798,30314,30575,35206,40694,41086,42513,53650,55802,60083,60436,62166,68357,69227,69442,69694,74053,78327,79633,90306,94198,98782,101560,103575,104787,145515,
#Deleted in new
chr8	67197673	67201805	chr8:67197673-67201805	0	-	67197673	67197673	8553170	2	2840,339,	0,3793,
#Deleted in new
chr8	67198404	67201889	chr8:67198404-67201889	0	-	67198404	67198404	8553170	3	694,118,423,	0,1991,3062,
#Partially deleted in new
chr8	67199010	67207190	chr8:67199010-67207190	0	-	67199010	67199010	8553170	6	88,118,139,169,140,96,	0,1385,2456,4072,5669,8084,
#Partially deleted in new
chr8	67199928	67238754	chr8:67199928-67238754	0	-	67200185	67238754	789624	18	585,139,169,140,133,73,139,136,130,131,161,173,152,170,41,91,151,20,	0,1538,3154,4751,11554,16661,17853,18074,19502,24974,26094,27208,27518,28034,28295,32926,38414,38806,
#Partially deleted in new
chr8	67299313	67343677	chr8:67299313-67343677	0	-	67299313	67343287	789624	5	42,157,31,173,168,	0,1910,3122,43850,44196,
#Deleted in new
chr8	67343974	67345087	chr8:67343974-67345087	3	+	67343974	67343974	8553170	1	1113,	0,
#Deleted in new
chr8	67406514	67407072	chr8:67406514-67407072	7	+	67406514	67406514	16724991	1	558,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	67422037	67429667	chr8:67422037-67429667	0	-	67422037	67422037	8553170	3	654,85,14,	0,6009,7616,
#Partially deleted in new
chr8	67422071	67746385	chr8:67422071-67746385	3	-	67422503	67746129	789624	11	620,85,203,91,111,102,102,115,125,76,372,	0,5975,11966,61696,62607,84715,87445,89469,95851,202104,323942,
#Partially deleted in new
chr8	67422071	67746378	chr8:67422071-67746378	0	-	67511568	67746129	789624	10	620,85,203,91,111,102,102,115,76,365,	0,5975,11966,61696,62607,84715,87445,89469,202104,323942,
#Partially deleted in new
chr8	67422124	67746343	chr8:67422124-67746343	0	-	67511568	67746129	789624	8	567,91,111,102,102,115,76,330,	0,61643,62554,84662,87392,89416,202051,323889,
#Partially deleted in new
chr8	67422309	67452650	chr8:67422309-67452650	0	-	67422309	67422309	8553170	4	382,85,203,358,	0,5737,11728,29983,
#Partially deleted in new
chr8	67483281	67746343	chr8:67483281-67746343	0	-	67483281	67483281	8553170	8	577,111,102,102,115,125,76,330,	0,1397,23505,26235,28259,34641,140894,262732,
#Deleted in new
chr8	67569415	67570078	chr8:67569415-67570078	7	+	67569415	67569415	16724991	1	663,	0,
#Partially deleted in new
chr8	67732586	67735665	chr8:67732586-67735665	3	+	67732586	67732586	8553170	2	79,471,	0,2608,
#Deleted in new
chr8	67849043	67849338	chr8:67849043-67849338	7	+	67849043	67849043	16724991	1	295,	0,
#Boundary problem: need 40, got 0, diff 40, mapped 0.0
chr8	67952117	68237030	chr8:67952117-68237030	3	+	67952394	68231378	789624	40	418,72,123,105,102,162,134,104,150,145,101,104,50,76,73,143,93,149,86,137,118,185,162,223,208,180,95,83,91,129,42,218,103,144,115,67,191,103,68,5698,	0,65728,67431,69918,75104,78379,86041,92369,100979,103712,108561,116915,117717,120377,125279,128325,128628,131122,135606,138461,141487,144899,147564,155991,157298,163635,166432,167314,168078,168803,175260,181941,186297,194091,205204,239604,240217,265498,272441,279215,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr8	67952367	68106007	chr8:67952367-68106007	0	+	67952367	67952367	8553170	24	168,72,123,105,102,162,134,104,150,145,101,104,50,76,73,143,93,149,86,137,118,185,162,870,	0,65478,67181,69668,74854,78129,85791,92119,100729,103462,108311,116665,117467,120127,125029,128075,128378,130872,135356,138211,141237,144649,147314,152770,
#Partially deleted in new
chr8	67952488	68111089	chr8:67952488-68111089	0	+	67952488	67952488	8553170	24	47,105,102,162,134,104,150,145,101,104,50,76,73,143,93,149,86,137,118,185,162,223,208,158,	0,69547,74733,78008,85670,91998,100608,103341,108190,116544,117346,120006,124908,127954,128257,130751,135235,138090,141116,144528,147193,155620,156927,158443,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	68082203	68095081	chr8:68082203-68095081	3	-	68082203	68082203	8553170	2	681,93,	0,12785,
#Partially deleted in new
chr8	68157374	68192630	chr8:68157374-68192630	0	+	68157374	68157374	8553170	3	62,67,296,	0,34347,34960,
#Partially deleted in new
chr8	68157406	68220350	chr8:68157406-68220350	0	+	68157406	68157406	8553170	5	30,67,191,103,175,	0,34315,34928,60209,62769,
#Deleted in new
chr8	68176767	68177221	chr8:68176767-68177221	7	+	68176767	68176767	16724991	1	454,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	68223317	68223402	chr8:68223317-68223402	3	-	68223317	68223317	8553170	1	85,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	68293445	68293818	chr8:68293445-68293818	7	-	68293445	68293445	16724991	1	373,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	68303467	68331491	chr8:68303467-68331491	3	-	68303467	68303467	789624	3	1334,81,185,	0,3050,27839,
#Partially deleted in new
chr8	68330721	68818561	chr8:68330721-68818561	3	+	68331012	68818246	789624	14	618,148,132,129,29,173,167,136,86,77,51,94,60,323,	0,108777,115607,137970,157301,191077,202261,309654,378272,390639,445677,456721,485164,487517,
#Partially deleted in new
chr8	68331141	68521939	chr8:68331141-68521939	0	+	68331141	68331141	8553170	5	198,148,132,29,141,	0,108357,115187,156881,190657,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	68331221	68448010	chr8:68331221-68448010	1	+	68331270	68446501	789624	3	118,148,1682,	0,108277,115107,
#Partially deleted in new
chr8	68331224	68535827	chr8:68331224-68535827	1	+	68331270	68533166	789624	7	115,148,132,129,29,173,2845,	0,108274,115104,137467,156798,190574,201758,
#Partially deleted in new
chr8	68437912	68819022	chr8:68437912-68819022	1	+	68439504	68818246	789624	13	1734,132,129,29,173,167,136,86,77,51,94,60,784,	0,8416,30779,50110,83886,95070,202463,271081,283448,338486,349530,377973,380326,
#Partially deleted in new
chr8	68439475	68818274	chr8:68439475-68818274	0	+	68439504	68530608	789624	14	171,132,129,29,173,87,167,136,86,77,51,94,60,36,	0,6853,29216,48547,82323,91117,93507,200900,269518,281885,336923,347967,376410,378763,
#Deleted in new
chr8	68525516	68525906	chr8:68525516-68525906	7	-	68525516	68525516	16724991	1	390,	0,
#Partially deleted in new
chr8	68533019	68787613	chr8:68533019-68787613	0	+	68533019	68533019	8553170	4	130,86,77,171,	0,175974,188341,254423,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	68625458	68792571	chr8:68625458-68792571	1	+	68625576	68791014	789624	8	197,136,86,77,51,94,59,1581,	0,14917,83535,95902,150940,161984,165356,165532,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	68695642	68695779	chr8:68695642-68695779	7	+	68695642	68695642	16724991	1	137,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	68848741	68852763	chr8:68848741-68852763	3	-	68848741	68848741	8553170	3	357,95,63,	0,1209,3959,
#Partially deleted in new
chr8	68911802	69104190	chr8:68911802-69104190	3	-	68911802	68911802	789624	5	1738,109,105,222,193,	0,12584,42255,156525,192195,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	68913162	69001512	chr8:68913162-69001512	0	-	68913162	68913162	8553170	4	378,109,105,129,	0,11224,40895,88221,
#Partially deleted in new
chr8	68924402	68959649	chr8:68924402-68959649	0	-	68924402	68924402	8553170	2	93,344,	0,34903,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	69110512	69110574	chr8:69110512-69110574	3	-	69110512	69110512	8553170	1	62,	0,
#Partially deleted in new
chr8	69129597	69130345	chr8:69129597-69130345	7	+	69129597	69129597	16724991	1	748,	0,
#Deleted in new
chr8	69175578	69178189	chr8:69175578-69178189	3	-	69175578	69175578	8553170	3	213,165,75,	0,1071,2536,
#Partially deleted in new
chr8	69425034	69447960	chr8:69425034-69447960	3	-	69425034	69425034	8553170	3	687,73,374,	0,4941,22552,
#Partially deleted in new
chr8	69425621	69448244	chr8:69425621-69448244	1	-	69425621	69425621	789624	4	100,73,112,427,	0,4354,21965,22196,
#Deleted in new
chr8	69446056	69446260	chr8:69446056-69446260	7	+	69446056	69446056	16724991	1	204,	0,
#Partially deleted in new
chr8	69466623	69660912	chr8:69466623-69660912	1	+	69563975	69658535	789624	23	327,162,95,73,232,240,152,170,151,176,129,57,130,217,256,97,95,66,176,143,124,34,2408,	0,29141,35250,96915,97292,109346,119733,122348,133979,135030,136568,136976,138179,154411,157318,160586,161148,161547,162880,171878,172111,174184,191881,
#Partially deleted in new
chr8	69466623	69660915	chr8:69466623-69660915	3	+	69563975	69658535	789624	22	327,95,73,232,240,152,170,151,176,129,57,130,217,256,97,95,66,176,143,124,34,2411,	0,35250,96915,97292,109346,119733,122348,133979,135030,136568,136976,138179,154411,157318,160586,161148,161547,162880,171878,172111,174184,191881,
#Partially deleted in new
chr8	69466623	69564064	chr8:69466623-69564064	0	+	69563975	69564064	789624	5	327,162,95,73,149,	0,29141,35250,96915,97292,
#Partially deleted in new
chr8	69466816	69495850	chr8:69466816-69495850	0	+	69466816	69466816	8553170	4	134,132,84,86,	0,2437,6425,28948,
#Partially deleted in new
chr8	69466986	69576051	chr8:69466986-69576051	0	+	69563975	69576051	789624	5	103,95,73,232,82,	0,34887,96552,96929,108983,
#Partially deleted in new
chr8	69492760	69660055	chr8:69492760-69660055	1	+	69563975	69658535	789624	23	365,162,95,73,232,240,152,170,151,176,129,57,130,217,256,97,95,66,176,143,124,34,1551,	0,3004,9113,70778,71155,83209,93596,96211,107842,108893,110431,110839,112042,128274,131181,134449,135011,135410,136743,145741,145974,148047,165744,
#Partially deleted in new
chr8	69492792	69660055	chr8:69492792-69660055	1	+	69563975	69658535	789624	22	333,95,73,232,240,152,170,151,176,129,57,130,217,256,97,95,66,176,143,124,34,1551,	0,9081,70746,71123,83177,93564,96179,107810,108861,110399,110807,112010,128242,131149,134417,134979,135378,136711,145709,145942,148015,165712,
#Partially deleted in new
chr8	69492792	69642296	chr8:69492792-69642296	1	+	69589055	69642296	789624	23	333,162,95,73,232,240,152,170,151,176,129,57,130,217,256,97,95,66,176,143,124,34,73,	0,2972,9081,70746,71123,83177,93564,96179,107810,108861,110399,110807,112010,128242,131149,134417,134979,135378,136711,145709,145942,148015,149431,
#Partially deleted in new
chr8	69492831	69563697	chr8:69492831-69563697	0	+	69492831	69492831	8553170	3	294,95,159,	0,9042,70707,
#Deleted in new
chr8	69562807	69564144	chr8:69562807-69564144	0	+	69563975	69564144	789624	3	291,73,229,	0,731,1108,
#Deleted in new
chr8	69562812	69563877	chr8:69562812-69563877	0	+	69562812	69562812	8553170	2	331,339,	0,726,
#Partially deleted in new
chr8	69563441	69576027	chr8:69563441-69576027	0	+	69563975	69576027	789624	3	170,232,58,	0,474,12528,
#Partially deleted in new
chr8	69563861	69586460	chr8:69563861-69586460	0	+	69563975	69586460	789624	3	286,240,104,	0,12108,22495,
#Partially deleted in new
chr8	69564047	69589120	chr8:69564047-69589120	0	+	69564047	69564047	8553170	4	100,240,152,75,	0,11922,22309,24998,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	69564095	69586508	chr8:69564095-69586508	0	+	69564095	69564095	8553170	4	52,240,116,152,	0,11874,20358,22261,
#Partially deleted in new
chr8	69592883	69597592	chr8:69592883-69597592	0	+	69592883	69592883	8553170	2	46,512,	0,4197,
#Partially deleted in new
chr8	69592909	69659408	chr8:69592909-69659408	0	+	69592909	69592909	789624	17	74,151,176,129,57,130,217,256,97,95,66,176,143,124,34,175,904,	0,7693,8744,10282,10690,11893,28125,31032,34300,34862,35261,36594,45592,45825,47898,49314,65595,
#Partially deleted in new
chr8	69592938	69597547	chr8:69592938-69597547	0	+	69592938	69592938	8553170	2	45,467,	0,4142,
#Partially deleted in new
chr8	69627803	69660051	chr8:69627803-69660051	0	+	69627803	69638823	789624	6	63,66,176,124,34,1547,	0,367,1700,10931,13004,30701,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	69637603	69659407	chr8:69637603-69659407	0	+	69637603	69637603	8553170	4	1041,124,34,903,	0,1131,3204,20901,
#Partially deleted in new
chr8	69638690	69658892	chr8:69638690-69658892	0	+	69638690	69638690	8553170	2	168,388,	0,19814,
#Deleted in new
chr8	69638810	69641147	chr8:69638810-69641147	0	+	69638810	69638810	8553170	2	48,340,	0,1997,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	69667046	69835064	chr8:69667046-69835064	3	-	69672868	69832673	789624	10	6280,65,242,160,199,165,218,133,1403,211,	0,9562,12331,15137,37984,70993,88377,94696,164720,167807,
#Partially deleted in new
chr8	69672342	69833390	chr8:69672342-69833390	1	-	69673286	69832673	789624	8	984,242,160,199,165,218,133,1624,	0,7035,9841,32688,65697,83081,89400,159424,
#Partially deleted in new
chr8	69672552	69834859	chr8:69672552-69834859	0	-	69682311	69832673	789624	6	774,65,242,160,1403,6,	0,4056,6825,9631,159214,162301,
#Partially deleted in new
chr8	69672662	69832715	chr8:69672662-69832715	1	-	69672868	69832673	789624	8	664,65,242,160,199,218,133,949,	0,3946,6715,9521,32368,82761,89080,159104,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	69700223	69700495	chr8:69700223-69700495	3	+	69700223	69700223	8553170	1	272,	0,
#Partially deleted in new
chr8	69704891	69834009	chr8:69704891-69834009	0	-	69704891	69704891	8553170	5	338,218,133,1403,169,	0,50532,56851,126875,128949,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	69761364	69834966	chr8:69761364-69834966	0	-	69761364	69761364	8553170	4	128,133,1403,113,	0,378,70402,73489,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	69794061	69794734	chr8:69794061-69794734	7	+	69794061	69794061	16724991	1	673,	0,
#Deleted in new
chr8	69832683	69834225	chr8:69832683-69834225	0	-	69832683	69832683	8553170	2	486,96,	0,1446,
#Deleted in new
chr8	69832722	69833628	chr8:69832722-69833628	0	-	69832722	69832722	8553170	2	447,163,	0,743,
#Partially deleted in new
chr8	69834110	69837370	chr8:69834110-69837370	0	+	69834110	69834110	8553170	2	96,732,	0,2528,
#Partially deleted in new
chr8	69834128	69837829	chr8:69834128-69837829	1	+	69834128	69834128	8553170	2	65,1191,	0,2510,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	69834152	69850417	chr8:69834152-69850417	3	+	69834152	69834152	8553170	3	54,96,281,	0,9149,15984,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	69843298	69854971	chr8:69843298-69854971	1	+	69843298	69843298	8553170	3	99,173,300,	0,6838,11373,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	69851147	69851436	chr8:69851147-69851436	3	-	69851147	69851147	8553170	1	289,	0,
#Deleted in new
chr8	69859263	69860540	chr8:69859263-69860540	7	-	69859263	69859263	16724991	1	1277,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	69922750	69923047	chr8:69922750-69923047	3	-	69922750	69922750	8553170	1	297,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	69929904	69930022	chr8:69929904-69930022	7	+	69929904	69929904	16724991	1	118,	0,
#Deleted in new
chr8	69938167	69938400	chr8:69938167-69938400	3	+	69938167	69938167	8553170	1	233,	0,
#Partially deleted in new
chr8	69942947	69944648	chr8:69942947-69944648	7	+	69942947	69942947	16724991	3	642,171,72,	0,1159,1629,
#Deleted in new
chr8	69987414	69987697	chr8:69987414-69987697	7	-	69987414	69987414	16724991	1	283,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	70051650	70071327	chr8:70051650-70071327	3	-	70052076	70069860	789624	8	654,102,203,271,158,54,724,178,	0,3649,6989,14584,16579,16828,17510,19499,
#Partially deleted in new
chr8	70069561	70071693	chr8:70069561-70071693	0	-	70069561	70069860	789624	2	323,99,	0,2033,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	70077905	70078032	chr8:70077905-70078032	3	-	70077905	70077905	8553170	1	127,	0,
#Partially deleted in new
chr8	70103797	70104179	chr8:70103797-70104179	7	-	70103797	70103797	16724991	1	382,	0,
#Partially deleted in new
chr8	70109761	70403805	chr8:70109761-70403805	3	-	70113631	70216745	0	23	3882,90,199,178,235,78,279,166,130,216,207,211,1270,148,144,102,189,178,104,173,105,57,106,	0,11540,14122,14926,17051,18671,18940,22075,28441,31422,34880,38511,46209,49743,52949,53703,56804,60440,64994,104141,106898,186982,293938,
#Partially deleted in new
chr8	70112069	70402079	chr8:70112069-70402079	0	-	70138317	70216745	789624	21	1574,279,178,235,78,279,166,130,221,211,1270,148,144,102,189,178,104,173,105,57,266,	0,11734,12618,14743,16363,16632,19767,26133,29109,36203,43901,47435,50641,51395,54496,58132,62686,101833,104590,184674,289744,
#Partially deleted in new
chr8	70113568	70148460	chr8:70113568-70148460	0	-	70113631	70148460	789624	11	75,90,199,178,235,78,279,166,130,216,188,	0,7733,10315,11119,13244,14864,15133,18268,24634,27615,34704,
#Partially deleted in new
chr8	70126608	70128747	chr8:70126608-70128747	0	-	70126608	70126608	8553170	3	439,78,46,	0,1824,2093,
#Partially deleted in new
chr8	70137972	70141242	chr8:70137972-70141242	0	-	70137972	70137972	8553170	2	360,59,	0,3211,
#Deleted in new
chr8	70155970	70157146	chr8:70155970-70157146	0	-	70155970	70155970	8553170	2	695,22,	0,1154,
#Partially deleted in new
chr8	70216695	70245375	chr8:70216695-70245375	0	-	70216695	70216745	789624	2	69,369,	0,28311,
#Partially deleted in new
chr8	70216720	70402587	chr8:70216720-70402587	0	-	70216720	70216745	789624	3	44,57,425,	0,80023,185442,
#Deleted in new
chr8	70273368	70273837	chr8:70273368-70273837	7	+	70273368	70273368	16724991	1	469,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	70357346	70357448	chr8:70357346-70357448	3	+	70357346	70357346	8553170	1	102,	0,
#Deleted in new
chr8	70424124	70424576	chr8:70424124-70424576	7	-	70424124	70424124	16724991	1	452,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	70471111	70480623	chr8:70471111-70480623	3	-	70471111	70471111	8553170	2	33,703,	0,8809,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	70480191	70480487	chr8:70480191-70480487	3	-	70480191	70480191	8553170	1	296,	0,
#Deleted in new
chr8	70506250	70506818	chr8:70506250-70506818	7	-	70506250	70506250	16724991	1	568,	0,
#Partially deleted in new
chr8	70573441	70608369	chr8:70573441-70608369	3	-	70574931	70608199	789624	11	1564,161,144,105,71,85,59,117,122,64,293,	0,9722,10208,13453,13664,21064,22821,24453,24692,26577,34635,
#Partially deleted in new
chr8	70573441	70607778	chr8:70573441-70607778	1	-	70574931	70598184	789624	11	1564,161,144,105,71,85,59,117,122,64,902,	0,9722,10208,13453,13664,21064,22821,24453,24692,26577,33435,
#Partially deleted in new
chr8	70583705	70608339	chr8:70583705-70608339	0	-	70583705	70583705	8553170	7	88,105,71,164,117,64,263,	0,3189,3400,3811,14189,16313,24371,
#Partially deleted in new
chr8	70594500	70608352	chr8:70594500-70608352	0	-	70594500	70594500	8553170	6	90,59,117,122,64,90,	0,1762,3394,3633,5518,13762,
#Partially deleted in new
chr8	70597890	70608387	chr8:70597890-70608387	0	-	70597890	70608106	789624	5	121,122,64,60,168,	0,243,2128,10186,10329,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	70608576	70663279	chr8:70608576-70663279	3	+	70608576	70608576	789624	4	257,82,242,3135,	0,43236,43934,51568,
#Partially deleted in new
chr8	70608603	70653981	chr8:70608603-70653981	1	+	70608603	70608603	8553170	4	230,82,218,287,	0,43209,43931,45091,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	70608681	70646490	chr8:70608681-70646490	0	+	70608681	70608681	8553170	3	152,186,446,	0,22423,37363,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	70613934	70646709	chr8:70613934-70646709	1	+	70613934	70613934	8553170	3	78,156,559,	0,1860,32216,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	70635317	70669174	chr8:70635317-70669174	3	-	70637859	70669120	0	8	68,89,82,149,179,127,164,176,	0,2497,3230,5584,8747,22438,26416,33681,
#Partially deleted in new
chr8	70637255	70669157	chr8:70637255-70669157	1	-	70637859	70669120	0	7	648,82,149,179,127,164,159,	0,1292,3646,6809,20500,24478,31743,
#Partially deleted in new
chr8	70638550	70644252	chr8:70638550-70644252	0	-	70638550	70638550	8553170	2	79,188,	0,5514,
#Partially deleted in new
chr8	70640572	70644128	chr8:70640572-70644128	0	-	70640572	70640572	8553170	2	478,64,	0,3492,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	70654577	70654883	chr8:70654577-70654883	3	-	70654577	70654577	8553170	1	306,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	70669364	70735942	chr8:70669364-70735942	3	+	70681058	70734424	789624	5	174,82,550,221,2147,	0,5453,11416,37568,64431,
#Partially deleted in new
chr8	70669368	71228629	chr8:70669368-71228629	3	+	70669368	70669368	8553170	9	106,221,158,102,206,161,156,198,1289,	0,37564,384108,452119,529771,530613,542428,547343,557972,
#Partially deleted in new
chr8	70669397	70734490	chr8:70669397-70734490	1	+	70681058	70734424	789624	6	141,82,110,550,221,695,	0,5420,8632,11383,37535,64398,
#Partially deleted in new
chr8	70669407	70790371	chr8:70669407-70790371	0	+	70669407	70669407	8553170	4	131,221,123,291,	0,37525,119931,120673,
#Partially deleted in new
chr8	70670572	70681325	chr8:70670572-70681325	0	+	70681058	70681325	789624	3	89,82,545,	0,4245,10208,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	70780913	70781008	chr8:70780913-70781008	3	-	70780913	70780913	8553170	1	95,	0,
#Partially deleted in new
chr8	71155456	71204223	chr8:71155456-71204223	1	+	71155456	71155456	8553170	6	97,69,104,206,161,48,	0,3482,20822,43683,44525,48719,
#Partially deleted in new
chr8	71155521	71162572	chr8:71155521-71162572	3	+	71155521	71155521	8553170	3	32,69,292,	0,3417,6759,
#Partially deleted in new
chr8	71197432	71362232	chr8:71197432-71362232	1	-	71199339	71354905	789624	18	1988,101,122,115,161,59,90,84,140,187,83,138,146,70,78,128,50,586,	0,13723,17954,18181,19259,19532,47170,72307,74325,101614,102205,120119,124301,124766,136664,157349,159029,164214,
#Partially deleted in new
chr8	71197432	71356678	chr8:71197432-71356678	1	-	71199339	71354905	789624	17	1988,101,122,115,161,59,90,84,140,187,83,138,146,70,78,128,217,	0,13723,17954,18181,19259,19532,47170,72307,74325,101614,102205,120119,124301,124766,136664,157349,159029,
#Partially deleted in new
chr8	71197432	71362066	chr8:71197432-71362066	1	-	71199339	71354905	789624	18	1988,101,122,115,161,59,90,84,140,187,83,138,146,70,78,128,50,420,	0,13723,17954,18181,19259,19532,47170,72307,74325,101614,102205,120119,124301,124766,136664,157349,159029,164214,
#Partially deleted in new
chr8	71197434	71356689	chr8:71197434-71356689	1	-	71199339	71356486	789624	16	1986,101,122,115,161,59,90,84,140,187,83,138,146,70,78,228,	0,13721,17952,18179,19257,19530,47168,72305,74323,101612,102203,120117,124299,124764,136662,159027,
#Partially deleted in new
chr8	71197434	71356511	chr8:71197434-71356511	1	-	71199339	71354905	789624	16	1986,101,122,115,161,59,84,140,187,83,123,146,70,78,128,50,	0,13721,17952,18179,19257,19530,72305,74323,101612,102203,120117,124299,124764,136662,157347,159027,
#Partially deleted in new
chr8	71197434	71361731	chr8:71197434-71361731	0	-	71299151	71354905	789624	18	1986,101,122,115,161,59,90,84,140,187,83,123,79,70,78,128,50,85,	0,13721,17952,18179,19257,19530,47168,72305,74323,101612,102203,120117,124299,124764,136662,157347,159027,164212,
#Partially deleted in new
chr8	71197438	71361860	chr8:71197438-71361860	1	-	71199339	71354905	789624	18	1982,101,122,115,161,59,90,84,140,187,83,123,143,70,78,128,50,214,	0,13717,17948,18175,19253,19526,47164,72301,74319,101608,102199,120113,124295,124760,136658,157343,159023,164208,
#Partially deleted in new
chr8	71197442	71356694	chr8:71197442-71356694	0	-	71322252	71354905	789624	17	1978,101,122,115,161,59,84,140,187,83,123,146,70,31,78,128,233,	0,13713,17944,18171,19249,19522,72297,74315,101604,102195,120109,124291,124756,126513,136654,157339,159019,
#Partially deleted in new
chr8	71197447	71270238	chr8:71197447-71270238	0	-	71197447	71197447	8553170	9	1973,101,122,115,161,59,90,84,36,	0,13708,17939,18166,19244,19517,47155,72292,72755,
#Partially deleted in new
chr8	71197510	71548061	chr8:71197510-71548061	3	-	71199339	71354905	789624	21	1910,101,122,115,161,59,90,84,140,187,83,138,146,70,78,128,50,109,180,105,198,	0,13645,17876,18103,19181,19454,47092,72229,74247,101536,102127,120041,124223,124688,136586,157271,158951,332318,333571,338233,350353,
#Partially deleted in new
chr8	71197520	71547626	chr8:71197520-71547626	1	-	71199339	71354905	789624	20	1900,101,122,115,161,59,90,84,140,187,83,138,146,70,78,128,50,74,105,112,	0,13635,17866,18093,19171,19444,47082,72219,74237,101526,102117,120031,124213,124678,136576,157261,158941,273337,338223,349994,
#Partially deleted in new
chr8	71197612	71548136	chr8:71197612-71548136	1	-	71199339	71535776	789624	19	1808,101,122,115,161,59,90,84,140,187,83,138,146,70,78,128,50,105,273,	0,13543,17774,18001,19079,19352,46990,72127,74145,101434,102025,119939,124121,124586,136484,157169,158849,338131,350251,
#Partially deleted in new
chr8	71197687	71547647	chr8:71197687-71547647	1	-	71199339	71535776	789624	18	1733,101,122,115,161,59,84,140,187,83,123,146,70,78,128,50,105,133,	0,13468,17699,17926,19004,19277,72052,74070,101359,101950,119864,124046,124511,136409,157094,158774,338056,349827,
#Partially deleted in new
chr8	71198160	71548055	chr8:71198160-71548055	1	-	71199339	71535776	789624	18	1260,101,122,115,161,59,84,140,187,83,123,143,70,78,128,50,105,192,	0,12995,17226,17453,18531,18804,71579,73597,100886,101477,119391,123573,124038,135936,156621,158301,337583,349703,
#Partially deleted in new
chr8	71199047	71362136	chr8:71199047-71362136	1	-	71199339	71356486	789624	17	373,101,122,115,161,59,90,84,140,187,83,138,143,70,78,50,490,	0,12108,16339,16566,17644,17917,45555,70692,72710,99999,100590,118504,122686,123151,135049,157414,162599,
#Partially deleted in new
chr8	71199068	71356609	chr8:71199068-71356609	1	-	71199339	71354905	789624	17	352,101,122,115,161,59,90,84,140,187,83,138,143,70,78,128,148,	0,12087,16318,16545,17623,17896,45534,70671,72689,99978,100569,118483,122665,123130,135028,155713,157393,
#Partially deleted in new
chr8	71199238	71356601	chr8:71199238-71356601	0	-	71199238	71199238	8553170	16	182,101,122,115,161,59,90,84,140,187,83,138,535,78,128,140,	0,11917,16148,16375,17453,17726,45364,70501,72519,99808,100399,118313,122495,134858,155543,157223,
#Partially deleted in new
chr8	71215612	71299108	chr8:71215612-71299108	0	-	71225236	71299108	789624	8	116,161,59,154,90,84,140,62,	0,1079,1352,9539,28990,54127,56145,83434,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	71317658	71322461	chr8:71317658-71322461	0	-	71317658	71317658	8553170	3	31,146,263,	0,4075,4540,
#Partially deleted in new
chr8	71321780	71361940	chr8:71321780-71361940	0	-	71321780	71356486	789624	5	99,70,78,50,294,	0,418,12316,34681,39866,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	71403439	71547657	chr8:71403439-71547657	0	-	71403439	71403439	8553170	4	1475,74,105,143,	0,67418,132304,144075,
#Partially deleted in new
chr8	71448810	71449219	chr8:71448810-71449219	7	-	71448810	71448810	16724991	1	409,	0,
#Partially deleted in new
chr8	71529406	71548187	chr8:71529406-71548187	0	-	71529406	71529406	8553170	5	339,109,180,105,324,	0,422,1675,6337,18457,
#Partially deleted in new
chr8	71530871	71592025	chr8:71530871-71592025	0	-	71530871	71530871	8553170	4	390,105,203,75,	0,4872,37853,61079,
#Partially deleted in new
chr8	71549988	71568767	chr8:71549988-71568767	0	-	71549988	71549988	8553170	2	304,43,	0,18736,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	71675299	71702786	chr8:71675299-71702786	3	+	71675299	71675299	8553170	2	236,572,	0,26915,
#Duplicated in new
chr8	71675376	71702435	chr8:71675376-71702435	1	+	71675376	71675376	8553170	3	159,93,221,	0,20564,26838,
#Partially deleted in new
chr8	71779604	71792875	chr8:71779604-71792875	3	-	71779604	71779604	8553170	3	332,115,272,	0,10524,12999,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	71815493	71815625	chr8:71815493-71815625	3	-	71815493	71815493	8553170	1	132,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	71828166	72002405	chr8:71828166-72002405	0	+	71828166	71828166	8553170	4	49,126,126,184,	0,134756,137242,174055,
#Partially deleted in new
chr8	71841548	71844468	chr8:71841548-71844468	3	-	71842660	71844178	789624	2	1199,824,	0,2096,
#Partially deleted in new
chr8	71842348	71842992	chr8:71842348-71842992	0	-	71842348	71842348	8553170	2	399,56,	0,588,
#Partially deleted in new
chr8	71842419	71843413	chr8:71842419-71843413	0	-	71842419	71842419	8553170	2	328,34,	0,960,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	71843122	72053047	chr8:71843122-72053047	1	+	71843122	71843122	789624	5	582,194,126,126,509,	0,1106,119800,122286,209416,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	71843560	72052713	chr8:71843560-72052713	0	+	71843560	71843560	8553170	4	144,126,126,175,	0,119362,121848,208978,
#Partially deleted in new
chr8	71844102	72056312	chr8:71844102-72056312	1	+	71844102	71844102	789624	3	320,126,3774,	0,118820,208436,
#Partially deleted in new
chr8	71844143	72052607	chr8:71844143-72052607	1	+	71844143	71844143	8553170	4	279,126,122,69,	0,118779,129394,208395,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	71844157	72118393	chr8:71844157-72118393	3	+	71844157	71844157	8553170	7	265,126,78,107,88,43,157,	0,118765,208381,232363,262703,272560,274079,
#Partially deleted in new
chr8	71895990	71896330	chr8:71895990-71896330	7	+	71895990	71895990	16724991	1	340,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	71961933	71966779	chr8:71961933-71966779	0	+	71961933	71961933	8553170	4	180,126,126,38,	0,989,3475,4808,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	71962921	72062292	chr8:71962921-72062292	1	+	71962921	71962921	8553170	6	127,126,78,118,79,41,	0,2487,89617,92543,97441,99330,
#Partially deleted in new
chr8	71970665	72002394	chr8:71970665-72002394	0	+	71970665	71970665	8553170	3	219,122,153,	0,2872,31576,
#Partially deleted in new
chr8	72019916	72065558	chr8:72019916-72065558	0	-	72019977	72065558	789624	24	107,98,114,69,183,130,170,90,163,71,96,60,94,167,115,165,170,101,100,49,137,146,109,108,	0,3897,6043,9984,13727,14331,16371,18066,18948,19810,26596,27231,30861,32682,33836,35519,35769,37000,37800,39473,41708,42882,43546,45534,
#Partially deleted in new
chr8	72021250	72075617	chr8:72021250-72075617	3	-	72022905	72075409	0	27	1866,98,114,69,183,130,170,90,163,71,96,60,94,167,115,165,170,101,100,49,137,146,109,108,176,157,319,	0,2563,4709,8650,12393,12997,15037,16732,17614,18476,25262,25897,29527,31348,32502,34185,34435,35666,36466,38139,40374,41548,42212,44200,47772,50460,54048,
#Deleted in new
chr8	72023128	72023870	chr8:72023128-72023870	0	-	72023128	72023128	8553170	2	427,57,	0,685,
#Partially deleted in new
chr8	72029725	72053322	chr8:72029725-72053322	0	+	72029725	72029725	8553170	2	48,784,	0,22813,
#Partially deleted in new
chr8	72034309	72041345	chr8:72034309-72041345	0	-	72034309	72034309	8553170	6	68,170,90,163,71,157,	0,1978,3673,4555,5417,6879,
#Partially deleted in new
chr8	72038765	72046545	chr8:72038765-72046545	0	-	72038765	72038765	8553170	3	262,71,33,	0,961,7747,
#Deleted in new
chr8	72053388	72055539	chr8:72053388-72055539	0	-	72053388	72053388	8553170	2	479,104,	0,2047,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	72196333	72202269	chr8:72196333-72202269	3	+	72196333	72196333	8553170	2	300,498,	0,5438,
#Partially deleted in new
chr8	72202750	72251565	chr8:72202750-72251565	7	-	72202750	72202750	16724991	25	114,69,183,130,170,90,163,71,99,60,94,168,113,165,170,101,95,49,131,146,109,108,182,157,111,	0,2548,6245,7010,9259,10539,11418,12227,18573,19202,22529,24209,25379,27296,27546,28800,29596,31237,34149,35305,35646,37919,42098,44757,48704,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	72357727	72357815	chr8:72357727-72357815	7	+	72357727	72357727	16724991	1	88,	0,
#Deleted in new
chr8	72429619	72430112	chr8:72429619-72430112	7	+	72429619	72429619	16724991	1	493,	0,
#Partially deleted in new
chr8	72462310	72470972	chr8:72462310-72470972	3	+	72462310	72462310	8553170	2	94,158,	0,8504,
#Partially deleted in new
chr8	72537390	72938349	chr8:72537390-72938349	3	+	72567734	72938091	789624	3	495,672,2415,	0,30251,398544,
#Deleted in new
chr8	72618721	72619383	chr8:72618721-72619383	7	-	72618721	72618721	16724991	1	662,	0,
#Partially deleted in new
chr8	72660583	72661470	chr8:72660583-72661470	7	-	72660583	72660583	16724991	2	457,146,	0,741,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	72732044	72751843	chr8:72732044-72751843	3	+	72732044	72732044	789624	3	57,68,1597,	0,17293,18202,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	72874858	72881740	chr8:72874858-72881740	3	-	72874858	72874858	8553170	3	345,101,42,	0,6636,6840,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	72947149	72950445	chr8:72947149-72950445	3	+	72947149	72947149	8553170	1	3296,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	73008863	73048122	chr8:73008863-73048122	1	+	73008886	73046137	0	9	342,96,122,87,150,113,92,104,2162,	0,5031,11820,13352,15958,18076,23178,30252,37097,
#Partially deleted in new
chr8	73008863	73046471	chr8:73008863-73046471	3	+	73008886	73046137	0	10	342,96,122,87,150,113,60,92,104,511,	0,5031,11820,13352,15958,18076,21472,23178,30252,37097,
#Partially deleted in new
chr8	73008876	73022280	chr8:73008876-73022280	0	+	73008886	73022280	789624	3	329,122,65,	0,11807,13339,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	73008907	73012505	chr8:73008907-73012505	0	+	73008907	73008907	8553170	1	3598,	0,
#Partially deleted in new
chr8	73012856	73027036	chr8:73012856-73027036	0	+	73012924	73027036	789624	6	75,96,122,87,150,97,	0,1038,7827,9359,11965,14083,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	73018944	73019044	chr8:73018944-73019044	3	-	73018944	73018944	8553170	1	100,	0,
#Partially deleted in new
chr8	73022232	73038798	chr8:73022232-73038798	0	+	73022232	73022232	8553170	5	70,150,113,92,93,	0,2589,4707,9809,16473,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	73029952	73046975	chr8:73029952-73046975	0	+	73029952	73029952	8553170	3	2181,104,1015,	0,9163,16008,
#Partially deleted in new
chr8	73031612	73038804	chr8:73031612-73038804	0	+	73031612	73031612	8553170	2	521,99,	0,7093,
#Deleted in new
chr8	73042909	73043346	chr8:73042909-73043346	3	-	73042909	73042909	8553170	1	437,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	73052177	73063061	chr8:73052177-73063061	3	+	73052177	73052177	8553170	2	3426,123,	0,10761,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	73064539	73093272	chr8:73064539-73093272	3	-	73067340	73093067	789624	5	2919,177,91,195,419,	0,5265,7240,16479,28314,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	73066531	73124088	chr8:73066531-73124088	0	-	73066531	73066531	8553170	5	927,177,91,195,582,	0,3273,5248,14487,56975,
#Deleted in new
chr8	73083786	73085879	chr8:73083786-73085879	3	-	73083786	73083786	8553170	2	55,425,	0,1668,
#Deleted in new
chr8	73215928	73216627	chr8:73215928-73216627	7	-	73215928	73215928	16724991	1	699,	0,
#Partially deleted in new
chr8	73241328	73259502	chr8:73241328-73259502	3	-	73241456	73259458	789624	4	277,56,154,171,	0,8939,15644,18003,
#Partially deleted in new
chr8	73241423	73259502	chr8:73241423-73259502	1	-	73250308	73259458	789624	4	182,56,86,171,	0,8844,15617,17908,
#Partially deleted in new
chr8	73241423	73259502	chr8:73241423-73259502	1	-	73241589	73259458	789624	3	182,154,171,	0,15549,17908,
#Deleted in new
chr8	73277363	73278046	chr8:73277363-73278046	7	-	73277363	73277363	16724991	1	683,	0,
#Deleted in new
chr8	73290266	73291137	chr8:73290266-73291137	0	-	73290266	73290266	8553170	2	439,95,	0,776,
#Deleted in new
chr8	73290283	73293633	chr8:73290283-73293633	1	-	73291043	73292691	789624	6	969,110,138,167,107,35,	0,1268,1489,1955,2405,3315,
#Deleted in new
chr8	73290638	73293898	chr8:73290638-73293898	1	-	73291043	73293612	0	7	67,210,110,138,167,109,300,	0,404,913,1134,1600,2050,2960,
#Deleted in new
chr8	73291039	73295789	chr8:73291039-73295789	1	-	73291043	73292691	789624	6	213,110,138,167,109,25,	0,512,733,1199,1649,4725,
#Deleted in new
chr8	73291041	73294438	chr8:73291041-73294438	3	-	73291043	73292691	789624	6	211,110,138,167,109,573,	0,510,731,1197,1647,2824,
#Deleted in new
chr8	73291113	73291903	chr8:73291113-73291903	0	-	73291113	73291113	8553170	2	548,131,	0,659,
#Deleted in new
chr8	73291782	73292922	chr8:73291782-73292922	0	-	73291782	73292691	789624	4	128,167,109,41,	0,456,906,1099,
#Deleted in new
chr8	73291815	73293342	chr8:73291815-73293342	0	-	73291815	73292691	789624	4	95,167,109,192,	0,423,873,1335,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	73294611	73325281	chr8:73294611-73325281	3	+	73295289	73323036	789624	6	967,236,99,146,132,2369,	0,2582,24484,26320,28067,28301,
#Deleted in new
chr8	73295515	73297740	chr8:73295515-73297740	0	+	73295515	73295515	8553170	2	63,547,	0,1678,
#Partially deleted in new
chr8	73295838	73320988	chr8:73295838-73320988	0	+	73297399	73320988	789624	4	44,236,99,57,	0,1355,23257,25093,
#Partially deleted in new
chr8	73297015	73323099	chr8:73297015-73323099	1	+	73297399	73323036	789624	5	414,99,146,132,187,	0,22080,23916,25663,25897,
#Partially deleted in new
chr8	73297710	73315609	chr8:73297710-73315609	0	-	73297710	73297710	8553170	3	292,94,44,	0,2628,17855,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	73310905	73356461	chr8:73310905-73356461	3	-	73310905	73310905	789624	6	2492,40,348,135,76,170,	0,4660,10834,30258,34315,45386,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	73315415	73356360	chr8:73315415-73356360	0	-	73315415	73315415	8553170	4	190,135,76,69,	0,25748,29805,40876,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	73321839	73323308	chr8:73321839-73323308	0	+	73321839	73321839	8553170	2	971,396,	0,1073,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	73358912	73362788	chr8:73358912-73362788	3	+	73358912	73358912	8553170	2	133,466,	0,3410,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	73358912	73362475	chr8:73358912-73362475	0	+	73358912	73358912	8553170	2	315,153,	0,3410,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	73368769	73369295	chr8:73368769-73369295	3	-	73368769	73368769	8553170	2	260,83,	0,443,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	73420003	73439237	chr8:73420003-73439237	0	+	73420003	73420003	8553170	2	236,306,	0,18928,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	73420073	73441526	chr8:73420073-73441526	3	+	73420073	73420073	789624	3	166,173,1737,	0,18858,19716,
#Partially deleted in new
chr8	73420368	73738327	chr8:73420368-73738327	1	-	73421371	73738301	789624	12	1097,89,308,61,132,138,213,108,160,136,160,44,	0,2245,131643,162401,174797,183357,193375,195306,196923,252738,268285,317915,
#Partially deleted in new
chr8	73420370	73746937	chr8:73420370-73746937	3	-	73421371	73709145	789624	15	1095,89,308,61,132,138,213,108,160,136,160,131,66,113,155,	0,2243,131641,162399,174795,183355,193373,195304,196921,252736,268283,288661,317913,319385,326412,
#Partially deleted in new
chr8	73420958	73458787	chr8:73420958-73458787	0	-	73420958	73420958	8553170	3	507,89,111,	0,1655,37718,
#Partially deleted in new
chr8	73421129	73746840	chr8:73421129-73746840	1	-	73421371	73617345	789624	10	336,89,308,61,132,138,213,108,160,58,	0,1484,130882,161640,174036,182596,192614,194545,196162,325653,
#Partially deleted in new
chr8	73421211	73746840	chr8:73421211-73746840	1	-	73421371	73673204	789624	14	254,89,114,308,61,132,138,213,108,160,136,66,113,58,	0,1402,106479,130800,161558,173954,182514,192532,194463,196080,251895,317072,318544,325571,
#Partially deleted in new
chr8	73511275	73511654	chr8:73511275-73511654	7	-	73511275	73511275	16724991	1	379,	0,
#Partially deleted in new
chr8	73527368	73582830	chr8:73527368-73582830	0	-	73527684	73582830	789624	3	436,308,61,	0,24643,55401,
#Partially deleted in new
chr8	73549603	73746840	chr8:73549603-73746840	1	-	73552005	73738301	789624	12	2716,61,132,138,213,108,160,136,160,66,113,58,	0,33166,45562,54122,64140,66071,67688,123503,139050,188680,190152,197179,
#Partially deleted in new
chr8	73549691	73738344	chr8:73549691-73738344	1	-	73552005	73709145	789624	11	2628,61,132,138,213,108,160,136,160,131,61,	0,33078,45474,54034,64052,65983,67600,123415,138962,159340,188592,
#Partially deleted in new
chr8	73549785	73747697	chr8:73549785-73747697	1	-	73552005	73747440	789624	10	2534,61,132,138,213,108,160,136,160,311,	0,32984,45380,53940,63958,65889,67506,123321,138868,197601,
#Partially deleted in new
chr8	73550546	73746884	chr8:73550546-73746884	1	-	73552005	73615692	789624	8	1773,61,132,138,213,133,160,102,	0,32223,44619,53179,63197,65128,66745,196236,
#Partially deleted in new
chr8	73551642	73747708	chr8:73551642-73747708	1	-	73552005	73738301	789624	11	677,61,132,138,213,108,160,136,160,66,322,	0,31127,43523,52083,62101,64032,65649,121464,137011,186641,195744,
#Partially deleted in new
chr8	73551829	73746879	chr8:73551829-73746879	1	-	73552005	73688813	789624	10	490,61,132,138,213,108,160,136,160,97,	0,30940,43336,51896,61914,63845,65462,121277,136824,194953,
#Partially deleted in new
chr8	73551895	73747471	chr8:73551895-73747471	0	-	73561528	73747440	789624	11	424,129,61,132,138,213,108,160,136,160,85,	0,9515,30874,43270,51830,61848,63779,65396,121211,136758,195491,
#Partially deleted in new
chr8	73552065	73747466	chr8:73552065-73747466	0	-	73552065	73617345	789624	8	254,61,132,138,213,108,160,80,	0,30704,43100,51660,61678,63609,65226,195321,
#Partially deleted in new
chr8	73552125	73746903	chr8:73552125-73746903	0	-	73552125	73738301	789624	6	194,61,132,66,113,121,	0,30644,43040,186158,187630,194657,
#Deleted in new
chr8	73590573	73590883	chr8:73590573-73590883	7	+	73590573	73590573	16724991	1	310,	0,
#Partially deleted in new
chr8	73613890	73746840	chr8:73613890-73746840	0	-	73613890	73613890	8553170	5	66,108,160,160,58,	0,1784,3401,74763,132892,
#Partially deleted in new
chr8	73613926	73746849	chr8:73613926-73746849	0	-	73613926	73738301	789624	7	30,108,160,136,160,66,67,	0,1748,3365,59180,74727,124357,132856,
#Deleted in new
chr8	73651288	73651602	chr8:73651288-73651602	7	+	73651288	73651288	16724991	1	314,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	73652256	73746840	chr8:73652256-73746840	1	-	73653892	73738301	789624	6	1640,136,160,66,113,58,	0,20850,36397,86027,87499,94526,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	73653497	73746818	chr8:73653497-73746818	0	-	73653497	73653497	8553170	7	399,136,160,131,66,113,36,	0,19609,35156,55534,84786,86258,93285,
#Partially deleted in new
chr8	73672183	73746882	chr8:73672183-73746882	0	-	73672183	73672183	8553170	6	247,136,146,66,113,100,	0,923,36848,66100,67572,74599,
#Partially deleted in new
chr8	73672981	73746840	chr8:73672981-73746840	0	-	73672981	73672981	8553170	5	261,160,66,113,58,	0,15672,65302,66774,73801,
#Partially deleted in new
chr8	73673138	73746840	chr8:73673138-73746840	0	-	73673138	73673138	8553170	5	104,131,66,113,58,	0,35893,65145,66617,73644,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	73673229	73746840	chr8:73673229-73746840	0	-	73673229	73738301	789624	6	13,160,66,113,140,58,	0,15424,65054,66526,68994,73553,
#Partially deleted in new
chr8	73673239	73746840	chr8:73673239-73746840	0	-	73673239	73673239	8553170	6	3,160,146,66,113,58,	0,15414,35792,65044,66516,73543,
#Partially deleted in new
chr8	73688650	73747473	chr8:73688650-73747473	0	-	73688650	73688650	8553170	5	163,131,66,113,87,	0,20381,49633,51105,58736,
#Partially deleted in new
chr8	73688690	73878854	chr8:73688690-73878854	3	-	73739824	73878822	789624	8	123,66,113,76,156,103,92,47,	0,49593,51065,116960,121783,136456,141690,190117,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	73688734	73746843	chr8:73688734-73746843	0	-	73688734	73688734	8553170	6	79,131,66,113,140,61,	0,20297,49549,51021,53489,58048,
#Partially deleted in new
chr8	73738300	73747366	chr8:73738300-73747366	0	-	73738300	73738300	8553170	3	49,113,65,	0,1455,9001,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	73780096	73830474	chr8:73780096-73830474	0	-	73780479	73830474	789624	5	421,76,156,103,94,	0,25554,30377,45050,50284,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	73786219	73878910	chr8:73786219-73878910	3	-	73794101	73878909	0	6	7896,76,156,103,92,103,	0,19431,24254,38927,44161,92588,
#Partially deleted in new
chr8	73790604	73878875	chr8:73790604-73878875	0	-	73810553	73878822	789624	5	3511,76,156,92,68,	0,15046,19869,39776,88203,
#Partially deleted in new
chr8	73792359	73878825	chr8:73792359-73878825	1	-	73794101	73878822	0	6	1756,76,156,103,92,18,	0,13291,18114,32787,38021,86448,
#Partially deleted in new
chr8	73792362	73878909	chr8:73792362-73878909	1	-	73794101	73878909	789624	7	1753,76,156,103,92,33,102,	0,13288,18111,32784,38018,77906,86445,
#Partially deleted in new
chr8	73793823	73878854	chr8:73793823-73878854	0	-	73810553	73878822	789624	6	292,84,76,156,92,47,	0,2783,11827,16650,36557,84984,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	73794041	73878860	chr8:73794041-73878860	0	-	73810553	73878822	789624	6	74,124,76,156,92,53,	0,1749,11609,16432,36339,84766,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	73831142	73831947	chr8:73831142-73831947	7	+	73831142	73831142	16724991	1	805,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	73833772	73834042	chr8:73833772-73834042	3	-	73833772	73833772	8553170	1	270,	0,
#Partially deleted in new
chr8	73905356	73915010	chr8:73905356-73915010	7	-	73905356	73905356	16724991	2	502,196,	0,9458,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	73939168	73972186	chr8:73939168-73972186	1	-	73941555	73959768	789624	4	2437,144,54,145,	0,16742,20596,32873,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	73945118	73972287	chr8:73945118-73972287	3	-	73946629	73959768	0	4	1702,144,54,43,	0,10792,14646,27126,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	73945137	73971908	chr8:73945137-73971908	1	-	73946629	73959768	0	5	1683,144,54,56,39,	0,10773,14627,25441,26732,
#Partially deleted in new
chr8	73945607	73972170	chr8:73945607-73972170	1	-	73946629	73956010	0	3	1213,144,94,	0,10303,26469,
#Partially deleted in new
chr8	73945616	73972247	chr8:73945616-73972247	1	-	73946629	73959768	0	4	1204,144,54,171,	0,10294,14148,26460,
#Partially deleted in new
chr8	73946263	73970637	chr8:73946263-73970637	1	-	73946629	73959768	0	4	557,144,54,59,	0,9647,13501,24315,
#Partially deleted in new
chr8	73946400	73972106	chr8:73946400-73972106	1	-	73946629	73959768	0	4	420,144,54,65,	0,9510,13364,25641,
#Partially deleted in new
chr8	73946472	73972232	chr8:73946472-73972232	1	-	73946629	73959768	0	5	348,144,54,114,156,	0,9438,13292,23087,25604,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	73946533	73971908	chr8:73946533-73971908	1	-	73946629	73959768	0	6	287,144,54,139,56,39,	0,9377,13231,17953,24045,25336,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	73946699	73972252	chr8:73946699-73972252	0	-	73946699	73959768	789624	5	121,144,54,139,176,	0,9211,13065,17787,25377,
#Partially deleted in new
chr8	73972551	73976491	chr8:73972551-73976491	0	+	73972551	73972551	8553170	3	442,132,187,	0,3278,3753,
#Partially deleted in new
chr8	73976206	73981366	chr8:73976206-73981366	1	+	73976281	73978869	789624	3	285,120,212,	0,2549,4948,
#Partially deleted in new
chr8	73976208	73982783	chr8:73976208-73982783	3	+	73976281	73981621	789624	3	283,106,1629,	0,2547,4946,
#Partially deleted in new
chr8	73976218	73979021	chr8:73976218-73979021	0	+	73976218	73976218	8553170	2	273,266,	0,2537,
#Deleted in new
chr8	73982124	73982467	chr8:73982124-73982467	7	+	73982124	73982124	16724991	1	343,	0,
#Deleted in new
chr8	73984492	73984883	chr8:73984492-73984883	7	+	73984492	73984492	16724991	1	391,	0,
#Partially deleted in new
chr8	73991351	74029087	chr8:73991351-74029087	3	+	73991442	74029054	0	5	203,90,129,53,132,	0,13444,18649,35437,37604,
#Partially deleted in new
chr8	73991425	74029074	chr8:73991425-74029074	1	+	73991442	74029054	0	4	129,129,53,119,	0,18575,35363,37530,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	74048676	74048784	chr8:74048676-74048784	3	+	74048676	74048676	8553170	1	108,	0,
#Partially deleted in new
chr8	74055881	74056647	chr8:74055881-74056647	7	+	74055881	74055881	16724991	1	766,	0,
#Deleted in new
chr8	74079536	74079643	chr8:74079536-74079643	3	+	74079536	74079536	8553170	1	107,	0,
#Partially deleted in new
chr8	74103515	74106744	chr8:74103515-74106744	3	+	74103515	74103515	8553170	2	351,78,	0,3151,
#Partially deleted in new
chr8	74199395	74208441	chr8:74199395-74208441	3	+	74199395	74199395	8553170	3	137,135,721,	0,7963,8325,
#Partially deleted in new
chr8	74234699	74321328	chr8:74234699-74321328	3	-	74237222	74321287	789624	6	2336,96,647,119,760,420,	0,2508,9829,24685,80161,86209,
#Partially deleted in new
chr8	74236802	74244788	chr8:74236802-74244788	0	-	74236802	74236802	8553170	3	204,96,260,	0,405,7726,
#Partially deleted in new
chr8	74237232	74321327	chr8:74237232-74321327	0	-	74315394	74321287	789624	5	71,647,119,760,54,	0,7296,22152,77628,84041,
#Partially deleted in new
chr8	74321129	74364290	chr8:74321129-74364290	0	+	74321129	74321129	8553170	5	116,174,95,115,306,	0,39007,40754,41809,42855,
#Partially deleted in new
chr8	74321513	74364260	chr8:74321513-74364260	0	+	74321513	74321513	8553170	5	75,174,95,115,276,	0,38623,40370,41425,42471,
#Deleted in new
chr8	74347756	74350050	chr8:74347756-74350050	3	-	74347756	74347756	8553170	2	449,141,	0,2153,
#Partially deleted in new
chr8	74350381	74366876	chr8:74350381-74366876	3	+	74350461	74364367	789624	6	197,193,174,95,115,2892,	0,892,9755,11502,12557,13603,
#Partially deleted in new
chr8	74350417	74364604	chr8:74350417-74364604	1	+	74351360	74364367	789624	6	55,169,174,95,115,620,	0,880,9719,11466,12521,13567,
#Partially deleted in new
chr8	74350433	74360248	chr8:74350433-74360248	0	+	74350433	74350433	8553170	2	145,112,	0,9703,
#Partially deleted in new
chr8	74350443	74364741	chr8:74350443-74364741	0	+	74350461	74360154	789624	6	135,48,174,95,115,757,	0,830,9693,11440,12495,13541,
#Partially deleted in new
chr8	74350443	74364029	chr8:74350443-74364029	0	+	74350443	74350443	8553170	5	135,193,95,115,45,	0,830,11440,12495,13541,
#Partially deleted in new
chr8	74362950	74488872	chr8:74362950-74488872	0	+	74362950	74362950	8553170	2	103,195,	0,125727,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	74376686	74376793	chr8:74376686-74376793	3	+	74376686	74376686	8553170	1	107,	0,
#Deleted in new
chr8	74548542	74548617	chr8:74548542-74548617	3	+	74548542	74548542	5263520	1	75,	0,
#Deleted in new
chr8	74548549	74548609	chr8:74548549-74548609	3	-	74548549	74548549	5263520	1	60,	0,
#Partially deleted in new
chr8	74603243	74604244	chr8:74603243-74604244	7	-	74603243	74603243	16724991	1	1001,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	74609697	74633320	chr8:74609697-74633320	3	-	74609697	74609697	8553170	5	343,113,82,53,86,	0,2756,19103,22752,23537,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	74702339	74768483	chr8:74702339-74768483	0	+	74702339	74702339	8553170	5	117,77,93,40,448,	0,1266,50101,55771,65696,
#Deleted in new
chr8	74705692	74705747	chr8:74705692-74705747	3	+	74705692	74705692	5263520	1	55,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	74798783	74866925	chr8:74798783-74866925	3	-	74798783	74798783	8553170	4	536,59,117,61,	0,19826,67734,68081,
#Deleted in new
chr8	74804286	74804811	chr8:74804286-74804811	7	-	74804286	74804286	16724991	1	525,	0,
#Partially deleted in new
chr8	74824533	74851147	chr8:74824533-74851147	1	+	74825249	74849253	8553170	6	142,341,119,133,116,2030,	0,648,19447,20594,20848,24584,
#Partially deleted in new
chr8	74824536	74855029	chr8:74824536-74855029	3	+	74825249	74849253	789624	6	139,313,119,133,116,5912,	0,673,19444,20591,20845,24581,
#Partially deleted in new
chr8	74824785	74849425	chr8:74824785-74849425	1	+	74825249	74849253	789624	5	737,119,133,116,308,	0,19195,20342,20596,24332,
#Partially deleted in new
chr8	74891150	74896302	chr8:74891150-74896302	3	-	74891150	74891150	8553170	2	160,578,	0,4574,
#Partially deleted in new
chr8	74984514	75034558	chr8:74984514-75034558	3	+	74985987	75032242	789624	15	406,320,119,133,116,101,141,61,67,131,44,73,76,131,2368,	0,1411,27918,28375,29472,30297,32050,32366,32532,32805,35355,35492,41031,44872,47676,
#Partially deleted in new
chr8	74984601	75012550	chr8:74984601-75012550	0	+	74984601	74984601	8553170	3	319,192,118,	0,1324,27831,
#Partially deleted in new
chr8	74984627	75012489	chr8:74984627-75012489	0	+	74985987	75012489	789624	4	125,51,320,57,	0,242,1298,27805,
#Partially deleted in new
chr8	75000153	75032841	chr8:75000153-75032841	1	+	75014040	75032242	789624	14	256,119,133,116,101,141,61,67,131,44,73,76,131,651,	0,12279,12736,13833,14658,16411,16727,16893,17166,19716,19853,25392,29233,32037,
#Partially deleted in new
chr8	75000173	75032841	chr8:75000173-75032841	1	+	75012954	75032242	789624	13	236,119,133,101,141,61,67,131,44,73,76,131,651,	0,12259,12716,14638,16391,16707,16873,17146,19696,19833,25372,29213,32017,
#Deleted in new
chr8	75026427	75029460	chr8:75026427-75029460	3	-	75026427	75026427	8553170	2	508,82,	0,2951,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	75223768	75278497	chr8:75223768-75278497	0	-	75223768	75223768	789624	2	590,141,	0,54588,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	75223897	75324316	chr8:75223897-75324316	0	-	75223897	75223897	8553170	2	461,96,	0,100323,
#Deleted in new
chr8	75302295	75302574	chr8:75302295-75302574	7	+	75302295	75302295	16724991	1	279,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	75376708	75377014	chr8:75376708-75377014	7	+	75376708	75376708	16724991	1	306,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	75407913	75527134	chr8:75407913-75527134	0	+	75407913	75407913	8553170	5	51,32,120,92,175,	0,77871,82175,87491,119046,
#Partially deleted in new
chr8	75407941	75553106	chr8:75407941-75553106	0	+	75407941	75407941	8553170	5	23,120,95,107,65,	0,82147,139645,143446,145100,
#Partially deleted in new
chr8	75408035	75564327	chr8:75408035-75564327	3	+	75543833	75564096	0	11	127,120,169,95,107,156,88,153,237,123,353,	0,82053,135775,139551,143352,145006,147946,150482,150765,152308,155939,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	75539868	75566843	chr8:75539868-75566843	1	+	75539992	75564096	0	10	212,169,95,107,156,88,153,237,123,2869,	0,3942,7718,11519,13173,16113,18649,18932,20475,24106,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	76265542	76265732	chr8:76265542-76265732	3	-	76265542	76265542	8553170	1	190,	0,
#Deleted in new
chr8	76403997	76405091	chr8:76403997-76405091	3	+	76403997	76403997	8553170	1	1094,	0,
#Deleted in new
chr8	76404057	76407138	chr8:76404057-76407138	3	+	76404057	76404057	8553170	1	3081,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	76491199	76683156	chr8:76491199-76683156	0	-	76491199	76491199	8553170	3	32,103,105,	0,11544,191852,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	76576550	76579345	chr8:76576550-76579345	3	-	76576550	76576550	8553170	2	136,203,	0,2592,
#Deleted in new
chr8	76603239	76603852	chr8:76603239-76603852	7	-	76603239	76603239	16724991	1	613,	0,
#Partially deleted in new
chr8	76610880	76683278	chr8:76610880-76683278	3	-	76610880	76610880	5263520	4	1147,130,207,227,	0,5441,61946,72171,
#Deleted in new
chr8	76611375	76615321	chr8:76611375-76615321	0	-	76611375	76611375	8553170	2	652,169,	0,3777,
#Deleted in new
chr8	76611673	76615028	chr8:76611673-76615028	0	-	76611673	76611673	8553170	2	354,236,	0,3119,
#Deleted in new
chr8	76615191	76616441	chr8:76615191-76616441	0	-	76615191	76615191	8553170	2	128,120,	0,1130,
#Partially deleted in new
chr8	76681218	76867285	chr8:76681218-76867285	3	+	76704088	76864565	789624	11	402,2636,503,232,69,117,134,201,118,5415,4192,	0,22824,26327,96989,152119,161436,167776,168293,169026,169667,181875,
#Partially deleted in new
chr8	76681238	76778439	chr8:76681238-76778439	0	+	76681238	76681238	8553170	2	382,232,	0,96969,
#Deleted in new
chr8	76681279	76708258	chr8:76681279-76708258	0	+	76681279	76681279	8553170	3	341,2636,635,	0,22763,26344,
#Deleted in new
chr8	76682526	76704554	chr8:76682526-76704554	0	+	76704088	76704554	789624	2	106,512,	0,21516,
#Partially deleted in new
chr8	76683780	76851917	chr8:76683780-76851917	0	+	76704088	76851917	789624	10	175,2636,503,232,69,117,134,201,118,1032,	0,20262,23765,94427,149557,158874,165214,165731,166464,167105,
#Deleted in new
chr8	76693405	76704554	chr8:76693405-76704554	0	+	76704088	76704554	789624	2	101,512,	0,10637,
#Deleted in new
chr8	76693432	76704508	chr8:76693432-76704508	0	+	76704088	76704508	789624	3	74,21,466,	0,10165,10610,
#Partially deleted in new
chr8	76704044	76865923	chr8:76704044-76865923	1	+	76704088	76864565	789624	10	2634,425,232,69,117,134,201,118,5415,2830,	0,3579,74163,129293,138610,144950,145467,146200,146841,159049,
#Deleted in new
chr8	76733301	76733476	chr8:76733301-76733476	3	-	76733301	76733301	8553170	1	175,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	76778281	76849708	chr8:76778281-76849708	0	+	76778281	76834140	789624	6	158,69,314,117,134,197,	0,55056,55839,64373,70713,71230,
#Partially deleted in new
chr8	76778287	76849071	chr8:76778287-76849071	0	+	76778287	76833368	789624	5	152,76,69,117,77,	0,3855,55050,64367,70707,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	76778287	76833626	chr8:76778287-76833626	0	+	76778287	76778287	8553170	2	152,289,	0,55050,
#Deleted in new
chr8	76849799	76850945	chr8:76849799-76850945	0	+	76849799	76849799	8553170	2	563,60,	0,1086,
#Partially deleted in new
chr8	76904590	76913399	chr8:76904590-76913399	3	+	76904590	76904590	8553170	3	88,138,425,	0,7346,8384,
#Deleted in new
chr8	76966767	76966850	chr8:76966767-76966850	3	-	76966767	76966767	5263520	1	83,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	76980257	77000226	chr8:76980257-77000226	3	-	76983260	76984178	789624	4	3938,110,32,237,	0,5929,8049,19732,
#Partially deleted in new
chr8	76982933	77000947	chr8:76982933-77000947	1	-	76983260	76984178	789624	3	1262,143,65,	0,17056,17949,
#Partially deleted in new
chr8	76982956	77000267	chr8:76982956-77000267	1	-	76983260	76984178	789624	3	1239,110,278,	0,3230,17033,
#Deleted in new
chr8	76983639	76986527	chr8:76983639-76986527	0	-	76983639	76984178	789624	3	556,110,34,	0,2547,2854,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	76987891	77000230	chr8:76987891-77000230	0	-	76987891	76987891	8553170	2	447,241,	0,12098,
#Deleted in new
chr8	77013750	77014028	chr8:77013750-77014028	7	-	77013750	77013750	16724991	1	278,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	77399071	77537290	chr8:77399071-77537290	3	+	77399071	77399071	8553170	7	83,68,228,92,56,93,66,	0,64929,106710,109434,116223,125393,138153,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	77450696	77476381	chr8:77450696-77476381	1	+	77450696	77450696	789624	3	80,68,98,	0,13304,25587,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	78148100	78153913	chr8:78148100-78153913	3	+	78148100	78148100	8553170	2	182,376,	0,5437,
#Deleted in new
chr8	78152321	78153913	chr8:78152321-78153913	0	+	78152321	78152321	8553170	2	132,376,	0,1216,
#Deleted in new
chr8	78398514	78398622	chr8:78398514-78398622	3	-	78398514	78398514	8553170	1	108,	0,
#Partially deleted in new
chr8	78516138	78605267	chr8:78516138-78605267	3	+	78598384	78601821	0	4	330,129,178,3526,	0,56672,82219,85603,
#Partially deleted in new
chr8	78516354	78603185	chr8:78516354-78603185	1	+	78598384	78601821	0	3	114,178,1444,	0,82003,85387,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	78535025	78558497	chr8:78535025-78558497	3	-	78535025	78535025	8553170	4	696,124,101,74,	0,824,21473,23398,
#Partially deleted in new
chr8	78591230	78602098	chr8:78591230-78602098	1	+	78598384	78601821	0	3	53,178,357,	0,7127,10511,
#Deleted in new
chr8	78605951	78609705	chr8:78605951-78609705	3	+	78605951	78605951	8553170	1	3754,	0,
#Partially deleted in new
chr8	78666046	78719765	chr8:78666046-78719765	3	+	78666148	78717493	789624	9	118,77,117,142,152,100,100,108,2438,	0,9740,12516,20420,23175,31360,32367,49174,51281,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	78666088	78679390	chr8:78666088-78679390	0	+	78666088	78666088	8553170	3	76,77,828,	0,9698,12474,
#Partially deleted in new
chr8	78666128	78697505	chr8:78666128-78697505	0	+	78666128	78666128	8553170	5	36,117,142,152,99,	0,12434,20338,23093,31278,
#Partially deleted in new
chr8	78697405	78717502	chr8:78697405-78717502	0	+	78697405	78717493	789624	5	101,100,117,108,175,	0,1008,14584,17815,19922,
#Partially deleted in new
chr8	78717899	78740082	chr8:78717899-78740082	0	-	78717899	78717899	8553170	7	143,102,116,93,54,132,81,	0,1109,3120,3448,18574,20604,22102,
#Deleted in new
chr8	78723795	78724136	chr8:78723795-78724136	7	-	78723795	78723795	16724991	1	341,	0,
#Partially deleted in new
chr8	78732771	78805523	chr8:78732771-78805523	3	-	78733712	78804922	0	6	1061,54,132,81,137,611,	0,3702,5732,7230,65300,72141,
#Partially deleted in new
chr8	78732773	78805523	chr8:78732773-78805523	1	-	78733712	78804922	789624	4	1059,81,137,611,	0,7228,65298,72139,
#Partially deleted in new
chr8	78732773	78805523	chr8:78732773-78805523	1	-	78733712	78804922	789624	5	1059,132,81,137,611,	0,5730,7228,65298,72139,
#Partially deleted in new
chr8	78733047	78805464	chr8:78733047-78805464	0	-	78747027	78804922	789624	7	781,54,132,81,203,137,552,	0,3426,5456,6954,13846,65024,71865,
#Partially deleted in new
chr8	78733664	78804928	chr8:78733664-78804928	0	-	78740059	78804922	789624	5	168,54,81,81,16,	0,2809,6337,64463,71248,
#Partially deleted in new
chr8	78733664	78804928	chr8:78733664-78804928	1	-	78733712	78804922	0	5	168,54,81,137,16,	0,2809,6337,64407,71248,
#Partially deleted in new
chr8	78733664	78805451	chr8:78733664-78805451	0	-	78740059	78804922	789624	6	168,54,132,81,81,539,	0,2809,4839,6337,64463,71248,
#Partially deleted in new
chr8	78747030	78805306	chr8:78747030-78805306	1	-	78747030	78804922	789624	3	66,137,394,	0,51041,57882,
#Partially deleted in new
chr8	78760141	78762431	chr8:78760141-78762431	7	-	78760141	78760141	16724991	1	2290,	0,
#Partially deleted in new
chr8	78797833	78805120	chr8:78797833-78805120	0	-	78797833	78797833	8553170	2	375,208,	0,7079,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	78805292	78956082	chr8:78805292-78956082	3	+	78805292	78805292	8553170	6	403,151,118,1549,119,581,	0,128450,132299,133188,137660,150209,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	78837528	78840522	chr8:78837528-78840522	3	+	78837528	78837528	8553170	1	2994,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	79297716	79314471	chr8:79297716-79314471	3	+	79297716	79297716	8553170	3	79,55,499,	0,9510,16256,
#Deleted in new
chr8	79520144	79520649	chr8:79520144-79520649	7	+	79520144	79520144	16724991	1	505,	0,
#Deleted in new
chr8	79571152	79572335	chr8:79571152-79572335	7	-	79571152	79571152	16724991	1	1183,	0,
#Partially deleted in new
chr8	79610813	79666175	chr8:79610813-79666175	3	+	79611195	79664874	789624	5	401,96,173,192,1361,	0,25988,30564,44057,54001,
#Partially deleted in new
chr8	79611151	79665007	chr8:79611151-79665007	1	+	79611195	79664816	789624	6	63,96,173,192,82,193,	0,25650,30226,43719,52428,53663,
#Partially deleted in new
chr8	79611734	79664881	chr8:79611734-79664881	1	+	79636815	79664874	789624	5	57,96,173,192,67,	0,25067,29643,43136,53080,
#Deleted in new
chr8	79764009	79767863	chr8:79764009-79767863	3	-	79765187	79767663	0	5	1762,82,84,76,289,	0,2641,2999,3209,3565,
#Deleted in new
chr8	79764012	79767857	chr8:79764012-79767857	1	-	79765187	79767663	0	5	1759,82,96,76,283,	0,2638,2984,3206,3562,
#Deleted in new
chr8	79764493	79766493	chr8:79764493-79766493	0	-	79764493	79764493	8553170	2	1278,127,	0,1873,
#Deleted in new
chr8	79764719	79766475	chr8:79764719-79766475	1	-	79765187	79766263	789624	2	1052,273,	0,1483,
#Deleted in new
chr8	79765430	79767472	chr8:79765430-79767472	0	-	79765430	79767269	789624	4	341,82,84,254,	0,1220,1578,1788,
#Deleted in new
chr8	79766766	79767784	chr8:79766766-79767784	0	-	79766766	79766766	8553170	3	326,76,210,	0,452,808,
#Deleted in new
chr8	79766933	79767760	chr8:79766933-79767760	0	-	79766933	79766933	8553170	2	159,542,	0,285,
#Deleted in new
chr8	79767009	79767857	chr8:79767009-79767857	0	-	79767009	79767009	8553170	2	285,283,	0,565,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	79768141	79802842	chr8:79768141-79802842	3	+	79768141	79768141	789624	4	77,61,127,356,	0,9197,11866,34345,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	79769371	79871737	chr8:79769371-79871737	3	-	79769371	79769371	789624	6	1634,56,87,47,133,169,	0,2195,32739,51097,100652,102197,
#Partially deleted in new
chr8	79783728	79802799	chr8:79783728-79802799	0	+	79783728	79783728	8553170	3	38,130,313,	0,16832,18758,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	79800132	79800195	chr8:79800132-79800195	3	-	79800132	79800132	8553170	1	63,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	79820568	79871759	chr8:79820568-79871759	0	-	79820568	79820568	8553170	4	43,183,81,191,	0,559,9932,51000,
#Partially deleted in new
chr8	79891594	79930832	chr8:79891594-79930832	3	+	79891594	79891594	8553170	4	126,218,115,1456,	0,897,34739,37782,
#Partially deleted in new
chr8	79918716	80030271	chr8:79918716-80030271	3	-	79918979	80030248	0	3	432,182,236,	0,84282,111319,
#Partially deleted in new
chr8	79918854	80029839	chr8:79918854-80029839	0	-	79918979	80029839	789624	3	294,182,79,	0,84144,110906,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	79918859	80080775	chr8:79918859-80080775	3	-	79958335	80080453	789624	8	289,179,182,49,102,149,116,461,	0,39397,84139,123760,132667,134422,145618,161455,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	79918939	80029912	chr8:79918939-80029912	1	-	79918979	80028781	789624	4	209,122,102,152,	0,84059,109755,110821,
#Partially deleted in new
chr8	79918965	80030289	chr8:79918965-80030289	1	-	79919100	80030248	789624	2	183,254,	0,111070,
#Partially deleted in new
chr8	79918987	80029964	chr8:79918987-80029964	0	-	79918987	80003147	789624	3	161,182,60,	0,84011,110917,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	79919031	80029974	chr8:79919031-80029974	0	-	79919031	80028781	789624	4	117,122,102,70,	0,83967,109663,110873,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	79919124	80030232	chr8:79919124-80030232	0	-	79919124	80030232	789624	4	24,182,102,179,	0,83874,109570,110929,
#Deleted in new
chr8	79956464	79957381	chr8:79956464-79957381	3	-	79956464	79956464	8553170	1	917,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	79957802	80003148	chr8:79957802-80003148	0	-	79958335	80003148	789624	2	633,150,	0,45196,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	79958271	80030254	chr8:79958271-80030254	0	-	79958271	79958271	8553170	3	164,122,201,	0,44727,71782,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	80032723	80033300	chr8:80032723-80033300	3	-	80032723	80032723	8553170	1	577,	0,
#Partially deleted in new
chr8	80034744	80171558	chr8:80034744-80171558	1	-	80038115	80171443	789624	6	3491,49,102,149,116,134,	0,7875,16782,18537,29733,136680,
#Partially deleted in new
chr8	80034871	80080831	chr8:80034871-80080831	1	-	80038115	80080453	789624	7	3364,49,42,102,149,116,517,	0,7748,9295,16655,18410,29606,45443,
#Partially deleted in new
chr8	80036099	80171659	chr8:80036099-80171659	1	-	80038115	80171443	789624	8	2136,49,42,27,102,149,116,235,	0,6520,8067,14345,15427,17182,28378,135325,
#Partially deleted in new
chr8	80036584	80080816	chr8:80036584-80080816	1	-	80038115	80080453	789624	7	1651,49,27,102,149,116,502,	0,6035,13860,14942,16697,27893,43730,
#Partially deleted in new
chr8	80036584	80080816	chr8:80036584-80080816	1	-	80038115	80080453	789624	8	1651,49,42,27,102,149,116,502,	0,6035,7582,13860,14942,16697,27893,43730,
#Partially deleted in new
chr8	80036590	80080816	chr8:80036590-80080816	3	-	80038115	80080453	789624	6	1645,49,102,149,116,502,	0,6029,14936,16691,27887,43724,
#Partially deleted in new
chr8	80036590	80080816	chr8:80036590-80080816	0	-	80052623	80080453	789624	9	1645,49,42,27,102,70,149,116,502,	0,6029,7576,13854,14936,16015,16691,27887,43724,
#Partially deleted in new
chr8	80037306	80171200	chr8:80037306-80171200	1	-	80038115	80044180	789624	8	929,49,42,27,102,149,116,180,	0,5313,6860,13138,14220,15975,27171,133714,
#Partially deleted in new
chr8	80037676	80051416	chr8:80037676-80051416	0	-	80037676	80037676	8553170	3	559,49,165,	0,4943,13575,
#Partially deleted in new
chr8	80037740	80051859	chr8:80037740-80051859	0	-	80037740	80037740	8553170	3	495,49,333,	0,4879,13786,
#Partially deleted in new
chr8	80037865	80064670	chr8:80037865-80064670	0	-	80037865	80037865	8553170	5	370,49,102,149,193,	0,4754,13661,15416,26612,
#Partially deleted in new
chr8	80037882	80171556	chr8:80037882-80171556	0	-	80051610	80171443	789624	5	353,49,102,149,132,	0,4737,13644,15399,133542,
#Partially deleted in new
chr8	80037885	80051401	chr8:80037885-80051401	0	-	80037885	80037885	8553170	4	350,49,27,150,	0,4734,12559,13366,
#Partially deleted in new
chr8	80037947	80042911	chr8:80037947-80042911	0	-	80037947	80037947	8553170	2	288,292,	0,4672,
#Partially deleted in new
chr8	80038184	80171471	chr8:80038184-80171471	0	-	80064565	80171443	789624	7	51,49,102,149,116,70,47,	0,4435,13342,15097,26293,81630,133240,
#Partially deleted in new
chr8	80038201	80053430	chr8:80038201-80053430	0	-	80038201	80038201	8553170	4	34,49,102,149,	0,4418,13325,15080,
#Partially deleted in new
chr8	80038216	80171573	chr8:80038216-80171573	0	-	80052623	80171443	789624	9	19,49,42,27,102,70,149,116,149,	0,4403,5950,12228,13310,14389,15065,26261,133208,
#Partially deleted in new
chr8	80042619	80053353	chr8:80042619-80053353	0	-	80042619	80042619	8553170	6	49,42,126,102,70,72,	0,1547,7726,8907,9986,10662,
#Partially deleted in new
chr8	80044169	80171508	chr8:80044169-80171508	0	-	80064565	80171443	789624	7	39,27,102,149,116,70,84,	0,6275,7357,9112,20308,75645,127255,
#Partially deleted in new
chr8	80051477	80080614	chr8:80051477-80080614	0	-	80051477	80051477	8553170	4	151,149,116,300,	0,1804,13000,28837,
#Partially deleted in new
chr8	80051543	80231232	chr8:80051543-80231232	0	-	80051543	80051543	8553170	5	85,149,116,71,164,	0,1738,12934,166925,179525,
#Partially deleted in new
chr8	80053045	80064552	chr8:80053045-80064552	0	-	80053045	80053045	8553170	2	385,75,	0,11432,
#Partially deleted in new
chr8	80053278	80171383	chr8:80053278-80171383	0	-	80053278	80171383	789624	3	152,116,177,	0,11199,117928,
#Partially deleted in new
chr8	80064462	80080613	chr8:80064462-80080613	0	-	80064462	80064462	8553170	2	131,299,	0,15852,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	80064474	80158887	chr8:80064474-80158887	0	-	80064474	80064474	8553170	2	119,451,	0,93962,
#Partially deleted in new
chr8	80066891	80080396	chr8:80066891-80080396	0	-	80066891	80066891	8553170	2	466,82,	0,13423,
#Partially deleted in new
chr8	80122851	80127670	chr8:80122851-80127670	3	+	80122851	80122851	8553170	2	262,102,	0,4717,
#Partially deleted in new
chr8	80177656	80218530	chr8:80177656-80218530	0	-	80177656	80177656	8553170	3	297,121,62,	0,5361,40812,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	80177992	80231172	chr8:80177992-80231172	0	-	80177992	80177992	8553170	3	287,71,104,	0,40476,53076,
#Partially deleted in new
chr8	80183020	80231219	chr8:80183020-80231219	0	-	80183020	80183020	8553170	3	118,71,151,	0,35448,48048,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	80204605	80204902	chr8:80204605-80204902	3	+	80204605	80204605	8553170	1	297,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	80241388	80241473	chr8:80241388-80241473	3	+	80241388	80241388	5263520	1	85,	0,
#Deleted in new
chr8	80265527	80266155	chr8:80265527-80266155	7	-	80265527	80265527	16724991	1	628,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	80265926	80484316	chr8:80265926-80484316	3	+	80265926	80265926	8553170	5	67,186,284,108,737,	0,22890,182770,216681,217653,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	80266153	80339840	chr8:80266153-80339840	0	+	80266153	80266153	8553170	4	79,139,186,40,	0,7951,22663,73647,
#Deleted in new
chr8	80300868	80301481	chr8:80300868-80301481	7	+	80300868	80300868	16724991	1	613,	0,
#Deleted in new
chr8	80316938	80317069	chr8:80316938-80317069	3	-	80316938	80316938	8553170	1	131,	0,
#Deleted in new
chr8	80351131	80351416	chr8:80351131-80351416	7	+	80351131	80351131	16724991	1	285,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	80405515	80405609	chr8:80405515-80405609	3	+	80405515	80405515	8553170	1	94,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	80484560	80486699	chr8:80484560-80486699	3	-	80484560	80484560	8553170	2	1165,507,	0,1632,
#Partially deleted in new
chr8	80485618	80519804	chr8:80485618-80519804	1	+	80485783	80519528	789624	6	261,889,99,177,173,582,	0,13875,28291,32784,33163,33604,
#Partially deleted in new
chr8	80485666	80526265	chr8:80485666-80526265	3	+	80486810	80519528	789624	7	217,1534,889,99,177,173,7043,	0,582,13827,28243,32736,33115,33556,
#Partially deleted in new
chr8	80486212	80526264	chr8:80486212-80526264	1	+	80486810	80519528	789624	7	1570,889,99,36,69,173,7042,	0,13281,27697,32190,32298,32569,33010,
#Partially deleted in new
chr8	80486212	80521772	chr8:80486212-80521772	1	+	80486810	80519528	789624	6	1570,889,99,177,173,2550,	0,13281,27697,32190,32569,33010,
#Partially deleted in new
chr8	80486306	80520135	chr8:80486306-80520135	1	+	80487329	80519528	789624	7	93,489,889,99,177,173,913,	0,987,13187,27603,32096,32475,32916,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	80535005	80539135	chr8:80535005-80539135	3	-	80535005	80535005	8553170	2	3572,194,	0,3936,
#Deleted in new
chr8	80541299	80543104	chr8:80541299-80543104	3	+	80541299	80541299	8553170	1	1805,	0,
#Deleted in new
chr8	80558869	80559757	chr8:80558869-80559757	7	+	80558869	80558869	16724991	1	888,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	80560566	80560625	chr8:80560566-80560625	3	+	80560566	80560566	8553170	1	59,	0,
#Deleted in new
chr8	80568049	80568506	chr8:80568049-80568506	7	-	80568049	80568049	16724991	1	457,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	80585584	80585773	chr8:80585584-80585773	3	-	80585584	80585584	8553170	1	189,	0,
#Deleted in new
chr8	80594814	80595703	chr8:80594814-80595703	7	-	80594814	80594814	16724991	1	889,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	80613543	80613826	chr8:80613543-80613826	3	-	80613543	80613543	8553170	1	283,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	80628450	80874781	chr8:80628450-80874781	3	-	80641365	80821594	789624	9	13027,95,105,268,101,233,104,242,211,	0,14584,31134,36364,42052,58775,64553,192923,246120,
#Deleted in new
chr8	80638533	80640695	chr8:80638533-80640695	0	-	80638533	80638533	8553170	2	250,170,	0,1992,
#Deleted in new
chr8	80644938	80645173	chr8:80644938-80645173	7	-	80644938	80644938	16724991	1	235,	0,
#Deleted in new
chr8	80658667	80659664	chr8:80658667-80659664	0	-	80658667	80658667	8553170	2	163,80,	0,917,
#Partially deleted in new
chr8	80664841	80673339	chr8:80664841-80673339	0	-	80664841	80664841	8553170	3	241,101,105,	0,5661,8393,
#Partially deleted in new
chr8	80665066	80814259	chr8:80665066-80814259	0	-	80665066	80665066	8553170	6	16,101,233,104,84,148,	0,5436,22159,27937,29158,149045,
#Partially deleted in new
chr8	80670592	80873665	chr8:80670592-80873665	0	-	80670592	80821594	789624	5	11,233,104,242,122,	0,16633,22411,150781,202951,
#Deleted in new
chr8	80749560	80749693	chr8:80749560-80749693	3	-	80749560	80749560	8553170	1	133,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	80776665	80776962	chr8:80776665-80776962	3	-	80776665	80776665	8553170	1	297,	0,
#Deleted in new
chr8	80812141	80812581	chr8:80812141-80812581	7	-	80812141	80812141	16724991	1	440,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	80967809	81112068	chr8:80967809-81112068	3	-	80976543	80993227	789624	9	9097,60,602,97,52,205,94,59,478,	0,12625,16966,19560,23669,25293,62186,102302,143781,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	80970290	80975780	chr8:80970290-80975780	0	-	80970290	80970290	8553170	2	617,259,	0,5231,
#Partially deleted in new
chr8	80985227	80987534	chr8:80985227-80987534	0	-	80985227	80985227	8553170	2	150,165,	0,2142,
#Partially deleted in new
chr8	81029790	81070176	chr8:81029790-81070176	0	-	81029790	81029790	8553170	2	299,65,	0,40321,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	81036963	81040831	chr8:81036963-81040831	3	+	81036963	81036963	8553170	3	305,168,72,	0,2415,3796,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	81058522	81067744	chr8:81058522-81067744	3	+	81058522	81058522	8553170	2	161,270,	0,8952,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	81154278	81159083	chr8:81154278-81159083	1	+	81154278	81154278	8553170	3	128,190,502,	0,3335,4303,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	81154329	81164599	chr8:81154329-81164599	3	+	81154329	81154329	8553170	3	77,129,316,	0,4252,9954,
#Partially deleted in new
chr8	81244155	81244338	chr8:81244155-81244338	7	+	81244155	81244155	16724991	1	183,	0,
#Deleted in new
chr8	81254869	81255229	chr8:81254869-81255229	7	+	81254869	81254869	16724991	1	360,	0,
#Deleted in new
chr8	81275398	81277570	chr8:81275398-81277570	3	-	81275398	81275398	8553170	1	2172,	0,
#Deleted in new
chr8	81279870	81281446	chr8:81279870-81281446	3	-	81279870	81279870	8553170	2	506,114,	0,1462,
#Deleted in new
chr8	81279886	81280675	chr8:81279886-81280675	0	-	81279886	81279886	8553170	2	490,81,	0,708,
#Partially deleted in new
chr8	81280362	81284777	chr8:81280362-81284777	3	+	81280595	81284567	0	4	312,173,102,264,	0,3003,3510,4151,
#Partially deleted in new
chr8	81280866	81284777	chr8:81280866-81284777	1	+	81283388	81284567	789624	4	447,173,102,264,	0,2499,3006,3647,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	81283027	81283940	chr8:81283027-81283940	0	+	81283027	81283027	8553170	2	511,68,	0,845,
#Deleted in new
chr8	81283325	81284415	chr8:81283325-81284415	0	+	81283325	81283325	8553170	2	213,543,	0,547,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	81440325	81447523	chr8:81440325-81447523	3	-	81443397	81447386	0	4	3123,102,173,210,	0,4174,4491,6988,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	81442412	81447439	chr8:81442412-81447439	1	-	81443440	81447386	789624	3	1036,102,126,	0,2087,4901,
#Partially deleted in new
chr8	81458340	81461579	chr8:81458340-81461579	3	-	81458382	81461523	0	4	93,102,173,129,	0,261,824,3110,
#Partially deleted in new
chr8	81478418	81483263	chr8:81478418-81483263	3	-	81478864	81483167	0	4	497,102,173,169,	0,995,2007,4676,
#Partially deleted in new
chr8	81478688	81483236	chr8:81478688-81483236	0	-	81478688	81478688	8553170	4	227,102,39,142,	0,725,1737,4406,
#Partially deleted in new
chr8	81478698	81483233	chr8:81478698-81483233	0	-	81480547	81483167	789624	4	217,102,173,135,	0,715,1727,4400,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	81478711	81479970	chr8:81478711-81479970	0	-	81478711	81478711	8553170	2	204,557,	0,702,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	81521617	81533275	chr8:81521617-81533275	3	+	81521617	81521617	8553170	4	200,122,183,354,	0,4225,4656,11304,
#Partially deleted in new
chr8	81521634	81526525	chr8:81521634-81526525	0	+	81521634	81521634	8553170	3	183,122,252,	0,4208,4639,
#Deleted in new
chr8	81521681	81522232	chr8:81521681-81522232	7	-	81521681	81521681	16724991	1	551,	0,
#Partially deleted in new
chr8	81524980	81531378	chr8:81524980-81531378	3	-	81525045	81531315	789624	4	140,102,173,136,	0,2039,4457,6262,
#Partially deleted in new
chr8	81524980	81531268	chr8:81524980-81531268	0	-	81527111	81531268	789624	4	140,102,235,26,	0,2039,4395,6262,
#Partially deleted in new
chr8	81605568	81626949	chr8:81605568-81626949	7	-	81605568	81605568	16724991	8	114,144,108,106,48,122,134,66,	0,1003,8152,14439,16834,18769,20493,21315,
#Deleted in new
chr8	81617219	81618560	chr8:81617219-81618560	7	-	81617219	81617219	16724991	1	1341,	0,
#Partially deleted in new
chr8	81626056	81631134	chr8:81626056-81631134	5	-	81626056	81626056	16724991	3	139,66,127,	0,830,4951,
#Deleted in new
chr8	81627268	81627617	chr8:81627268-81627617	7	+	81627268	81627268	16724991	1	349,	0,
#Deleted in new
chr8	81634356	81635662	chr8:81634356-81635662	7	-	81634356	81634356	16724991	1	1306,	0,
#Partially deleted in new
chr8	81657960	81686693	chr8:81657960-81686693	3	-	81659350	81681560	0	9	1506,152,109,109,46,105,134,87,442,	0,2555,12978,15880,18273,21165,22689,23537,28291,
#Partially deleted in new
chr8	81659043	81686301	chr8:81659043-81686301	1	-	81660527	81681560	0	8	423,152,109,46,105,134,87,50,	0,1472,14797,17190,20082,21606,22454,27208,
#Partially deleted in new
chr8	81659261	81686283	chr8:81659261-81686283	1	-	81659350	81685915	0	10	205,152,109,109,46,105,134,87,201,32,	0,1254,11677,14579,16972,19864,21388,22236,26501,26990,
#Partially deleted in new
chr8	81660513	81685832	chr8:81660513-81685832	0	-	81660513	81685832	789624	8	154,109,109,46,105,134,66,70,	0,10425,13327,15720,18612,20136,20984,25249,
#Partially deleted in new
chr8	81660515	81686328	chr8:81660515-81686328	0	-	81673945	81681560	789624	7	152,109,109,105,134,87,77,	0,10423,13325,18610,20134,20982,25736,
#Partially deleted in new
chr8	81660572	81686315	chr8:81660572-81686315	0	-	81660572	81660572	8553170	8	95,109,109,32,105,130,87,64,	0,10366,13268,15661,18553,20077,20925,25679,
#Partially deleted in new
chr8	81670938	81686318	chr8:81670938-81686318	0	-	81670938	81681540	789624	7	109,109,46,105,130,87,67,	0,2902,5295,8187,9711,10559,15313,
#Partially deleted in new
chr8	81670939	81686310	chr8:81670939-81686310	0	-	81670939	81681560	789624	6	108,109,46,134,87,59,	0,2901,5294,9710,10558,15312,
#Partially deleted in new
chr8	81670977	81674421	chr8:81670977-81674421	0	-	81670977	81670977	8553170	2	70,581,	0,2863,
#Partially deleted in new
chr8	81671007	81686310	chr8:81671007-81686310	0	-	81676237	81681560	789624	7	40,109,32,105,134,87,59,	0,2833,5226,8118,9642,10490,15244,
#Partially deleted in new
chr8	81673840	81686051	chr8:81673840-81686051	0	-	81673840	81685915	789624	6	109,46,105,134,87,289,	0,2393,5285,6809,7657,11922,
#Partially deleted in new
chr8	81673895	81686282	chr8:81673895-81686282	0	-	81674798	81681560	789624	7	54,160,46,105,134,87,31,	0,776,2338,5230,6754,7602,12356,
#Deleted in new
chr8	81693606	81696174	chr8:81693606-81696174	3	-	81693655	81694972	789624	1	2568,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	81696367	81698694	chr8:81696367-81698694	3	+	81696367	81696367	8553170	1	2327,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	81701333	81715039	chr8:81701333-81715039	0	-	81701333	81701333	8553170	4	1532,156,978,53,	0,1635,12584,13653,
#Partially deleted in new
chr8	81701721	81721300	chr8:81701721-81721300	1	-	81702694	81721281	789624	8	1144,135,122,92,128,40,43,74,	0,1247,12196,13082,13265,15527,16460,19505,
#Partially deleted in new
chr8	81701722	81721300	chr8:81701722-81721300	3	-	81702694	81721281	789624	8	1143,156,122,92,128,40,43,74,	0,1246,12195,13081,13264,15526,16459,19504,
#Partially deleted in new
chr8	81701764	81721289	chr8:81701764-81721289	1	-	81702694	81714840	789624	7	1101,156,122,92,128,43,63,	0,1204,12153,13039,13222,16417,19462,
#Deleted in new
chr8	81702158	81703128	chr8:81702158-81703128	0	-	81702158	81702158	8553170	2	731,160,	0,810,
#Partially deleted in new
chr8	81702323	81714040	chr8:81702323-81714040	0	-	81703024	81714040	789624	3	542,119,123,	0,645,11594,
#Partially deleted in new
chr8	81702543	81721287	chr8:81702543-81721287	0	-	81708811	81721281	789624	9	322,156,42,122,92,128,40,43,61,	0,425,6244,11374,12260,12443,14705,15638,18683,
#Partially deleted in new
chr8	81702547	81721282	chr8:81702547-81721282	1	-	81702791	81714840	789624	7	310,156,122,92,128,43,34,	0,421,11370,12256,12439,15634,18701,
#Partially deleted in new
chr8	81702681	81721295	chr8:81702681-81721295	1	-	81702694	81714840	789624	7	184,156,122,92,128,43,47,	0,287,11236,12122,12305,15500,18567,
#Partially deleted in new
chr8	81702728	81721290	chr8:81702728-81721290	0	-	81708811	81714840	789624	8	137,156,42,122,92,128,43,64,	0,240,6059,11189,12075,12258,15453,18498,
#Partially deleted in new
chr8	81702824	81732407	chr8:81702824-81732407	0	-	81702824	81714840	789624	6	41,156,122,311,43,209,	0,144,11093,11979,15357,29374,
#Partially deleted in new
chr8	81702913	81721263	chr8:81702913-81721263	1	-	81702920	81714840	789624	6	211,122,92,128,43,37,	0,11004,11890,12073,15268,18313,
#Partially deleted in new
chr8	81702913	81721288	chr8:81702913-81721288	1	-	81702920	81721281	789624	7	211,122,92,128,40,43,62,	0,11004,11890,12073,14335,15268,18313,
#Partially deleted in new
chr8	81702992	81732345	chr8:81702992-81732345	0	-	81702992	81714840	789624	6	132,122,92,128,43,147,	0,10925,11811,11994,15189,29206,
#Partially deleted in new
chr8	81703098	81732881	chr8:81703098-81732881	0	-	81703098	81714840	789624	6	26,122,92,128,43,129,	0,10819,11705,11888,15083,29654,
#Partially deleted in new
chr8	81713917	81721300	chr8:81713917-81721300	0	-	81713917	81714840	789624	4	122,311,43,74,	0,886,4264,7309,
#Partially deleted in new
chr8	81713917	81732387	chr8:81713917-81732387	0	-	81713917	81714840	789624	6	122,92,128,40,43,189,	0,886,1069,3331,4264,18281,
#Partially deleted in new
chr8	81713947	81721241	chr8:81713947-81721241	0	-	81713947	81714840	789624	6	92,92,128,40,43,172,	0,856,1039,3301,4234,7122,
#Partially deleted in new
chr8	81713950	81721283	chr8:81713950-81721283	0	-	81713950	81714840	789624	5	89,92,128,43,218,	0,853,1036,4231,7115,
#Partially deleted in new
chr8	81714324	81721295	chr8:81714324-81721295	0	-	81714324	81714324	8553170	4	571,128,43,69,	0,662,3857,6902,
#Partially deleted in new
chr8	81714439	81732903	chr8:81714439-81732903	0	-	81714439	81714439	8553170	5	479,128,40,43,151,	0,547,2809,3742,18313,
#Partially deleted in new
chr8	81714598	81721300	chr8:81714598-81721300	0	-	81714598	81714598	8553170	5	297,128,40,43,74,	0,388,2650,3583,6628,
#Partially deleted in new
chr8	81714673	81732373	chr8:81714673-81732373	0	-	81714673	81714673	8553170	4	222,128,43,175,	0,313,3508,17525,
#Partially deleted in new
chr8	81714986	81732619	chr8:81714986-81732619	0	-	81714986	81714986	8553170	3	128,43,421,	0,3195,17212,
#Partially deleted in new
chr8	81717251	81721244	chr8:81717251-81721244	0	-	81717251	81717251	8553170	3	37,43,493,	0,930,3500,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	81732433	81759515	chr8:81732433-81759515	3	+	81732626	81758544	0	5	383,178,115,154,1036,	0,20630,22936,25708,26046,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	81791822	81815714	chr8:81791822-81815714	3	+	81791822	81791822	8553170	2	103,375,	0,23517,
#Partially deleted in new
chr8	81799580	81842193	chr8:81799580-81842193	1	-	81801496	81839986	0	7	2013,120,137,70,149,471,72,	0,2799,3511,15744,24211,40031,42541,
#Partially deleted in new
chr8	81799586	81842286	chr8:81799586-81842286	3	-	81801496	81839986	0	9	2007,120,137,70,149,87,471,246,165,	0,2793,3505,15738,24205,29843,40025,40611,42535,
#Partially deleted in new
chr8	81800722	81840213	chr8:81800722-81840213	1	-	81801496	81839986	789624	11	871,5,3,6,103,137,70,149,87,471,16,	0,1657,1663,1667,1674,2369,14602,23069,28707,38889,39475,
#Partially deleted in new
chr8	81800957	81842304	chr8:81800957-81842304	1	-	81801496	81839986	0	8	636,120,137,70,149,87,471,183,	0,1422,2134,14367,22834,28472,38654,41164,
#Partially deleted in new
chr8	81803115	81842206	chr8:81803115-81842206	0	-	81803115	81839986	789624	3	113,471,85,	0,36496,39006,
#Deleted in new
chr8	81807771	81808726	chr8:81807771-81808726	7	+	81807771	81807771	16724991	1	955,	0,
#Partially deleted in new
chr8	81814644	81823850	chr8:81814644-81823850	0	-	81814644	81814644	8553170	2	750,59,	0,9147,
#Partially deleted in new
chr8	81823791	81842866	chr8:81823791-81842866	0	-	81823791	81839986	789624	4	149,87,471,97,	0,5638,15820,18978,
#Partially deleted in new
chr8	81823791	81842183	chr8:81823791-81842183	0	-	81823791	81839986	789624	5	149,87,140,244,62,	0,5638,15820,16047,18330,
#Partially deleted in new
chr8	81839680	81842302	chr8:81839680-81842302	0	-	81839680	81839986	789624	4	71,244,246,181,	0,158,517,2441,
#Partially deleted in new
chr8	81839709	81841958	chr8:81839709-81841958	0	-	81839709	81839986	789624	3	373,246,261,	0,488,1988,
#Partially deleted in new
chr8	81839733	81842217	chr8:81839733-81842217	0	-	81839733	81839986	789624	3	349,246,96,	0,464,2388,
#Partially deleted in new
chr8	81839877	81842054	chr8:81839877-81842054	0	-	81839877	81839986	789624	3	205,246,126,	0,320,2051,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	82108564	82160542	chr8:82108564-82160542	1	-	82108564	82108564	8553170	3	149,184,126,	0,43193,51852,
#Partially deleted in new
chr8	82291623	82292379	chr8:82291623-82292379	7	-	82291623	82291623	16724991	1	756,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	82514567	82677153	chr8:82514567-82677153	1	-	82514567	82514567	8553170	7	94,134,54,34,79,113,36,	0,8665,11477,49614,73597,115355,162550,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	82862778	82958696	chr8:82862778-82958696	3	-	82862778	82862778	8553170	6	332,184,77,91,73,57,	0,2688,19036,19481,54028,95861,
#Partially deleted in new
chr8	82912103	82961926	chr8:82912103-82961926	3	+	82912103	82912103	789624	4	275,85,114,142,	0,835,49092,49681,
#Deleted in new
chr8	82979410	82979886	chr8:82979410-82979886	7	+	82979410	82979410	16724991	1	476,	0,
#Deleted in new
chr8	83099975	83100846	chr8:83099975-83100846	7	-	83099975	83099975	16724991	1	871,	0,
#Deleted in new
chr8	83200951	83202431	chr8:83200951-83202431	7	-	83200951	83200951	16724991	1	1480,	0,
#Deleted in new
chr8	83293924	83294271	chr8:83293924-83294271	7	-	83293924	83293924	16724991	1	347,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	83403757	83408900	chr8:83403757-83408900	3	+	83403757	83403757	789624	2	312,1209,	0,3934,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	83912712	84140283	chr8:83912712-84140283	3	+	83912712	83912712	8553170	4	123,61,95,361,	0,131831,171436,227210,
#Deleted in new
chr8	84162117	84162471	chr8:84162117-84162471	7	+	84162117	84162117	16724991	1	354,	0,
#Partially deleted in new
chr8	84163448	84164564	chr8:84163448-84164564	7	-	84163448	84163448	16724991	4	205,31,82,63,	0,544,888,1053,
#Partially deleted in new
chr8	84182786	84529577	chr8:84182786-84529577	0	+	84529321	84529577	789624	3	221,95,279,	0,1543,346512,
#Partially deleted in new
chr8	84183266	84921836	chr8:84183266-84921836	1	+	84529321	84920911	789624	10	312,32,279,76,33,48,158,114,173,943,	0,162852,346032,591312,621503,666713,679029,690017,704337,737627,
#Partially deleted in new
chr8	84183273	84921631	chr8:84183273-84921631	1	+	84529321	84920911	789624	9	305,279,76,33,48,158,114,173,738,	0,346025,591305,621496,666706,679022,690010,704330,737620,
#Partially deleted in new
chr8	84183342	84921631	chr8:84183342-84921631	1	+	84529321	84920911	789624	9	1082,279,76,33,48,158,114,173,738,	0,345956,591236,621427,666637,678953,689941,704261,737551,
#Partially deleted in new
chr8	84183533	84921836	chr8:84183533-84921836	1	+	84529321	84920911	789624	8	891,279,76,48,158,114,173,943,	0,345765,591045,666446,678762,689750,704070,737360,
#Partially deleted in new
chr8	84184224	84774638	chr8:84184224-84774638	0	+	84529321	84529577	789624	4	200,32,279,60,	0,161894,345074,590354,
#Partially deleted in new
chr8	84184874	84921844	chr8:84184874-84921844	3	+	84184998	84920911	789624	9	140,279,76,33,48,158,114,173,951,	0,344424,589704,619895,665105,677421,688409,702729,736019,
#Partially deleted in new
chr8	84184940	84529464	chr8:84184940-84529464	0	+	84529321	84529464	789624	2	293,166,	0,344358,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	84665758	84665865	chr8:84665758-84665865	3	-	84665758	84665758	8553170	1	107,	0,
#Deleted in new
chr8	84678797	84679842	chr8:84678797-84679842	7	+	84678797	84678797	16724991	1	1045,	0,
#Partially deleted in new
chr8	84705926	84921841	chr8:84705926-84921841	1	+	84706023	84920911	789624	8	134,76,33,48,158,114,173,948,	0,68652,98843,144053,156369,167357,181677,214967,
#Partially deleted in new
chr8	84705935	84921844	chr8:84705935-84921844	1	+	84706023	84920916	789624	6	125,76,33,158,114,951,	0,68643,98834,156360,167348,214958,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	84828572	84829479	chr8:84828572-84829479	7	-	84828572	84828572	16724991	2	395,146,	0,761,
#Partially deleted in new
chr8	84864667	84864907	chr8:84864667-84864907	7	-	84864667	84864667	16724991	1	240,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	84872481	84921482	chr8:84872481-84921482	0	+	84872481	84872481	8553170	2	916,589,	0,48412,
#Partially deleted in new
chr8	84948584	84949674	chr8:84948584-84949674	7	+	84948584	84948584	16724991	1	1090,	0,
#Partially deleted in new
chr8	84980072	84980547	chr8:84980072-84980547	7	-	84980072	84980072	16724991	1	475,	0,
#Partially deleted in new
chr8	85086614	85087186	chr8:85086614-85087186	7	+	85086614	85086614	16724991	1	572,	0,
#Partially deleted in new
chr8	85107146	85146076	chr8:85107146-85146076	3	+	85107295	85145511	789624	19	253,206,66,168,176,210,194,148,149,205,140,202,186,175,164,209,138,136,688,	0,2448,2968,5785,7953,8228,16266,17645,19542,22028,22772,24613,27700,28642,30317,30888,31191,34235,38242,
#Partially deleted in new
chr8	85107214	85138174	chr8:85107214-85138174	0	+	85107295	85110121	789624	13	185,66,168,194,148,149,205,140,202,186,175,164,140,	0,2900,5717,16198,17577,19474,21960,22704,24545,27632,28574,30249,30820,
#Partially deleted in new
chr8	85107237	85138074	chr8:85107237-85138074	0	+	85107295	85110121	789624	15	162,66,168,176,210,194,148,149,205,140,202,186,175,164,40,	0,2877,5694,7862,8137,16175,17554,19451,21937,22681,24522,27609,28551,30226,30797,
#Partially deleted in new
chr8	85107237	85138170	chr8:85107237-85138170	0	+	85107295	85107403	789624	15	481,66,168,176,210,194,148,149,205,140,202,186,175,164,136,	0,2877,5694,7862,8137,16175,17554,19451,21937,22681,24522,27609,28551,30226,30797,
#Partially deleted in new
chr8	85107237	85131930	chr8:85107237-85131930	0	+	85107295	85110121	789624	7	162,66,168,148,149,140,171,	0,2877,5694,17554,19451,22681,24522,
#Partially deleted in new
chr8	85108661	85146076	chr8:85108661-85146076	1	+	85109550	85145511	789624	18	1139,66,168,176,210,194,148,149,205,140,202,186,175,164,209,138,136,688,	0,1453,4270,6438,6713,14751,16130,18027,20513,21257,23098,26185,27127,28802,29373,29676,32720,36727,
#Partially deleted in new
chr8	85172076	85177041	chr8:85172076-85177041	3	-	85172076	85172076	789624	3	241,35,211,	0,361,4754,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	85175798	85177062	chr8:85175798-85177062	1	-	85175798	85175798	8553170	1	1264,	0,
#Partially deleted in new
chr8	85177224	85214518	chr8:85177224-85214518	3	+	85177420	85213862	0	8	430,110,162,44,65,268,45,766,	0,24922,25869,28952,30200,31917,34935,36528,
#Partially deleted in new
chr8	85177386	85214515	chr8:85177386-85214515	1	+	85177420	85213862	0	8	268,110,162,44,65,268,48,763,	0,24760,25707,28790,30038,31755,34770,36366,
#Deleted in new
chr8	85177521	85178150	chr8:85177521-85178150	3	-	85177521	85177521	8553170	2	277,191,	0,438,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	85177611	85217158	chr8:85177611-85217158	0	+	85177611	85212212	789624	8	43,110,162,44,65,268,4151,199,	0,24535,25482,28565,29813,31530,34545,39348,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	85187684	85214037	chr8:85187684-85214037	1	+	85203232	85213862	0	8	112,110,162,44,65,268,48,285,	0,14462,15409,18492,19740,21457,24472,26068,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	85187684	85214490	chr8:85187684-85214490	1	+	85206193	85213862	789624	8	112,110,162,48,65,268,48,738,	0,14462,15409,18492,19740,21457,24472,26068,
#Deleted in new
chr8	85201784	85203262	chr8:85201784-85203262	0	+	85201784	85201784	8553170	2	472,169,	0,1309,
#Partially deleted in new
chr8	85206162	85216209	chr8:85206162-85216209	0	+	85206162	85213862	789624	6	58,65,268,48,150,85,	0,1262,2979,5994,7590,9962,
#Partially deleted in new
chr8	85209212	85214518	chr8:85209212-85214518	0	+	85209212	85214305	789624	3	197,48,359,	0,2944,4947,
#Partially deleted in new
chr8	85214075	85220374	chr8:85214075-85220374	3	-	85214559	85217499	789624	4	556,117,117,69,	0,845,3310,6230,
#Partially deleted in new
chr8	85214076	85220367	chr8:85214076-85220367	1	-	85214559	85217499	789624	3	555,117,62,	0,3309,6229,
#Partially deleted in new
chr8	85214486	85220384	chr8:85214486-85220384	1	-	85214559	85217499	789624	5	145,117,117,128,79,	0,434,2899,4749,5819,
#Partially deleted in new
chr8	85214501	85220421	chr8:85214501-85220421	1	-	85214559	85217499	789624	4	130,117,128,116,	0,2884,4734,5804,
#Partially deleted in new
chr8	85214501	85220375	chr8:85214501-85220375	1	-	85214559	85217499	789624	5	130,117,117,41,70,	0,419,2884,4821,5804,
#Deleted in new
chr8	85214501	85215134	chr8:85214501-85215134	0	-	85214501	85214501	8553170	2	130,214,	0,419,
#Partially deleted in new
chr8	85214502	85217702	chr8:85214502-85217702	1	-	85214559	85217499	789624	3	129,117,317,	0,418,2883,
#Partially deleted in new
chr8	85214555	85220353	chr8:85214555-85220353	1	-	85214559	85217499	789624	5	76,117,117,125,48,	0,365,2830,4680,5750,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	85215014	85219322	chr8:85215014-85219322	0	-	85215014	85217499	789624	3	23,117,616,	0,2371,3692,
#Partially deleted in new
chr8	85216812	85220414	chr8:85216812-85220414	0	-	85216812	85216812	8553170	2	690,109,	0,3493,
#Partially deleted in new
chr8	85217159	85220339	chr8:85217159-85220339	1	-	85217274	85217499	789624	4	133,117,41,34,	0,226,2163,3146,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	85218625	85220394	chr8:85218625-85220394	0	-	85218625	85218625	8553170	2	738,89,	0,1680,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	85218670	85220374	chr8:85218670-85220374	0	-	85218670	85218670	8553170	2	690,69,	0,1635,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	85220586	85250797	chr8:85220586-85250797	0	+	85220586	85220586	8553170	4	539,116,152,58,	0,9498,17132,30153,
#Partially deleted in new
chr8	85220615	85268627	chr8:85220615-85268627	0	+	85220615	85220615	8553170	8	510,116,198,119,96,142,63,156,	0,9469,30124,38805,45992,46601,47286,47856,
#Partially deleted in new
chr8	85220926	85230336	chr8:85220926-85230336	0	+	85220926	85220926	8553170	4	199,341,116,44,	0,4028,9158,9366,
#Partially deleted in new
chr8	85222445	85229016	chr8:85222445-85229016	1	-	85222445	85222445	8553170	3	408,131,50,	0,4063,6521,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	85222730	85245717	chr8:85222730-85245717	3	-	85222730	85222730	8553170	3	123,344,323,	0,20614,22664,
#Partially deleted in new
chr8	85230162	85230715	chr8:85230162-85230715	0	+	85230162	85230162	8553170	2	38,423,	0,130,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	85245526	85284073	chr8:85245526-85284073	3	+	85245828	85281349	0	7	339,198,119,96,63,156,2844,	0,5213,13894,21081,22375,22945,35703,
#Partially deleted in new
chr8	85246294	85249848	chr8:85246294-85249848	3	-	85246294	85246294	8553170	2	260,25,	0,3529,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	85327607	85379014	chr8:85327607-85379014	3	-	85328559	85341635	0	9	1069,156,63,96,119,198,61,54,969,	0,2081,4882,5917,9337,10644,13991,24123,50438,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	85327607	85379014	chr8:85327607-85379014	1	-	85328559	85341613	789624	6	1069,156,96,61,54,969,	0,2081,5917,13991,24123,50438,
#Partially deleted in new
chr8	85328228	85349901	chr8:85328228-85349901	1	-	85328559	85341635	0	8	448,156,63,96,119,198,61,91,	0,1460,4261,5296,8716,10023,13370,21582,
#Partially deleted in new
chr8	85328228	85342843	chr8:85328228-85342843	1	-	85328559	85341635	0	8	448,156,63,96,119,198,61,95,	0,1460,4261,5296,8716,10023,13370,14520,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	85328229	85378113	chr8:85328229-85378113	1	-	85328559	85341635	0	8	447,156,63,96,119,198,61,68,	0,1459,4260,5295,8715,10022,13369,49816,
#Partially deleted in new
chr8	85328438	85341659	chr8:85328438-85341659	1	-	85328559	85341613	789624	4	238,156,96,61,	0,1250,5086,13160,
#Partially deleted in new
chr8	85328488	85338295	chr8:85328488-85338295	0	-	85328559	85338295	789624	6	128,156,63,96,119,44,	0,1200,4001,5036,8456,9763,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	85328564	85378113	chr8:85328564-85378113	0	-	85328564	85341635	789624	7	112,156,63,96,119,61,68,	0,1124,3925,4960,8380,13034,49481,
#Partially deleted in new
chr8	85328592	85341714	chr8:85328592-85341714	0	-	85328592	85341635	789624	7	84,156,63,96,119,198,116,	0,1096,3897,4932,8352,9659,13006,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	85328593	85378113	chr8:85328593-85378113	0	-	85328593	85341613	789624	6	83,156,63,96,61,68,	0,1095,3896,4931,13005,49452,
#Partially deleted in new
chr8	85329697	85337212	chr8:85329697-85337212	0	-	85329697	85329697	8553170	4	147,63,96,268,	0,2792,3827,7247,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	85329755	85378113	chr8:85329755-85378113	0	-	85329755	85341613	789624	6	89,63,96,61,77,68,	0,2734,3769,11843,12993,48290,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	85329830	85378113	chr8:85329830-85378113	0	-	85329830	85341635	789624	8	14,63,96,119,198,61,77,68,	0,2659,3694,7114,8421,11768,12918,48215,
#Partially deleted in new
chr8	85332370	85342825	chr8:85332370-85342825	0	-	85332370	85332370	8553170	3	182,96,77,	0,1154,10378,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	85332493	85378113	chr8:85332493-85378113	0	-	85338128	85341635	789624	7	59,96,119,51,198,61,68,	0,1031,4451,5595,5758,9105,45552,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	85333526	85378108	chr8:85333526-85378108	0	-	85333526	85341635	789624	7	94,119,198,61,77,54,63,	0,3418,4725,8072,9222,18204,44519,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	85333527	85378113	chr8:85333527-85378113	0	-	85333527	85333527	8553170	6	93,119,198,116,61,68,	0,3417,4724,7492,8071,44518,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	85333527	85378113	chr8:85333527-85378113	0	-	85333527	85341635	789624	6	93,119,198,61,75,68,	0,3417,4724,8071,16283,44518,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	85333529	85378113	chr8:85333529-85378113	0	-	85333529	85341635	789624	6	91,119,198,61,81,68,	0,3415,4722,8069,8224,44516,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	85336944	85378113	chr8:85336944-85378113	0	-	85336944	85341635	789624	5	119,198,61,55,68,	0,1307,4654,4809,41101,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	85337001	85378113	chr8:85337001-85378113	0	-	85337001	85341635	789624	6	62,198,61,75,54,68,	0,1250,4597,12809,14729,41044,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	85337984	85378113	chr8:85337984-85378113	0	-	85337984	85337984	8553170	3	465,61,68,	0,3614,40061,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	85338018	85378113	chr8:85338018-85378113	0	-	85338018	85338018	8553170	5	121,198,61,77,68,	0,233,3580,4730,40027,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	85338419	85378113	chr8:85338419-85378113	0	-	85338419	85341635	789624	7	30,61,77,126,75,54,68,	0,3179,4329,4680,11391,13311,39626,
#Deleted in new
chr8	85341414	85342800	chr8:85341414-85342800	0	-	85341414	85341414	8553170	2	245,52,	0,1334,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	85373435	85442130	chr8:85373435-85442130	0	+	85439908	85442130	789624	4	33,282,198,58,	0,9518,66276,68637,
#Partially deleted in new
chr8	85438826	85449040	chr8:85438826-85449040	3	+	85438909	85448153	0	7	117,198,119,93,63,156,1007,	0,885,3246,5207,6329,7315,9207,
#Partially deleted in new
chr8	85438857	85442433	chr8:85438857-85442433	0	+	85438857	85438857	8553170	3	86,198,361,	0,854,3215,
#Partially deleted in new
chr8	85441850	85464333	chr8:85441850-85464333	1	-	85441850	85441850	789624	3	387,66,106,	0,20885,22377,
#Partially deleted in new
chr8	85442046	85464915	chr8:85442046-85464915	3	-	85442046	85442046	789624	3	191,66,334,	0,20689,22535,
#Partially deleted in new
chr8	85456622	85463054	chr8:85456622-85463054	1	-	85456622	85456622	789624	3	241,66,123,	0,6113,6309,
#Partially deleted in new
chr8	85463851	85481493	chr8:85463851-85481493	3	+	85464081	85480789	0	7	264,198,119,93,63,156,824,	0,1420,9841,10472,11946,13268,16818,
#Partially deleted in new
chr8	85463967	85480886	chr8:85463967-85480886	0	+	85464081	85474385	789624	6	148,198,93,63,156,217,	0,1304,10356,11830,13152,16702,
#Partially deleted in new
chr8	85464002	85474577	chr8:85464002-85474577	0	+	85464002	85464002	8553170	4	113,198,119,254,	0,1269,9690,10321,
#Partially deleted in new
chr8	85464010	85473976	chr8:85464010-85473976	0	+	85464010	85464010	8553170	3	105,198,284,	0,1261,9682,
#Partially deleted in new
chr8	85464013	85477155	chr8:85464013-85477155	0	+	85464081	85473462	789624	7	102,198,80,119,93,63,36,	0,1258,9375,9679,10310,11784,13106,
#Partially deleted in new
chr8	85523898	85540511	chr8:85523898-85540511	3	+	85523898	85523898	8553170	3	227,283,167,	0,678,16446,
#Deleted in new
chr8	85617343	85617512	chr8:85617343-85617512	7	-	85617343	85617343	16724991	1	169,	0,
#Partially deleted in new
chr8	85642776	85646325	chr8:85642776-85646325	7	-	85642776	85642776	16724991	2	1512,385,	0,3164,
#Partially deleted in new
chr8	85654683	85658514	chr8:85654683-85658514	7	-	85654683	85654683	16724991	2	915,373,	0,3458,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	85656441	85663039	chr8:85656441-85663039	7	-	85656441	85656441	16724991	1	6598,	0,
#Deleted in new
chr8	85661523	85663497	chr8:85661523-85663497	5	-	85661523	85661523	16724991	1	1974,	0,
#Deleted in new
chr8	85714921	85715833	chr8:85714921-85715833	7	+	85714921	85714921	16724991	1	912,	0,
#Partially deleted in new
chr8	85733418	85737278	chr8:85733418-85737278	7	+	85733418	85733418	16724991	2	430,1497,	0,2363,
#Partially deleted in new
chr8	85744542	85748373	chr8:85744542-85748373	7	-	85744542	85744542	16724991	2	912,378,	0,3453,
#Partially deleted in new
chr8	85762908	85766931	chr8:85762908-85766931	7	-	85762908	85762908	16724991	2	1515,593,	0,3430,
#Partially deleted in new
chr8	85775105	85779090	chr8:85775105-85779090	7	-	85775105	85775105	16724991	2	1513,556,	0,3429,
#Partially deleted in new
chr8	85790381	85794399	chr8:85790381-85794399	7	-	85790381	85790381	16724991	2	1510,589,	0,3429,
#Partially deleted in new
chr8	85802573	85806435	chr8:85802573-85806435	7	-	85802573	85802573	16724991	2	1513,424,	0,3438,
#Partially deleted in new
chr8	85814766	85818783	chr8:85814766-85818783	7	-	85814766	85814766	16724991	2	1509,589,	0,3428,
#Deleted in new
chr8	85826864	85827942	chr8:85826864-85827942	5	-	85826864	85826864	16724991	1	1078,	0,
#Deleted in new
chr8	85826952	85828467	chr8:85826952-85828467	7	-	85826952	85826952	16724991	1	1515,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	85833376	85908602	chr8:85833376-85908602	0	+	85833376	85833376	8553170	3	399,3719,290,	0,52558,74936,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	85839704	85908613	chr8:85839704-85908613	3	+	85839704	85839704	8553170	4	81,60,75,301,	0,46230,49874,68608,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	85851445	85861562	chr8:85851445-85861562	3	-	85851445	85851445	8553170	4	1327,167,78,89,	0,3064,3858,10028,
#Partially deleted in new
chr8	85889522	85951083	chr8:85889522-85951083	1	+	85889522	85889522	8553170	2	131,240,	0,61321,
#Deleted in new
chr8	86016818	86017126	chr8:86016818-86017126	7	+	86016818	86016818	16724991	1	308,	0,
#Partially deleted in new
chr8	86043101	86043507	chr8:86043101-86043507	7	+	86043101	86043101	16724991	1	406,	0,
#Partially deleted in new
chr8	86048372	86069697	chr8:86048372-86069697	3	-	86048461	86069622	789624	3	395,667,260,	0,15592,21065,
#Partially deleted in new
chr8	86064078	86088621	chr8:86064078-86088621	0	-	86064078	86064078	8553170	3	553,56,112,	0,10037,24431,
#Partially deleted in new
chr8	86064230	86084852	chr8:86064230-86084852	0	-	86064230	86064230	8553170	3	401,56,172,	0,9885,20450,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	86098836	86154228	chr8:86098836-86154228	3	+	86098978	86152977	789624	8	272,172,179,80,78,177,75,1413,	0,14872,40620,42613,44040,51275,52629,53979,
#Partially deleted in new
chr8	86098964	86154225	chr8:86098964-86154225	3	-	86098964	86098964	8553170	2	119,158,	0,55103,
#Partially deleted in new
chr8	86180417	86212236	chr8:86180417-86212236	3	+	86180417	86180417	8553170	5	202,60,115,82,42,	0,6229,15469,19723,31777,
#Partially deleted in new
chr8	86214051	86230381	chr8:86214051-86230381	3	-	86214412	86230277	789624	4	595,362,132,789,	0,3418,8920,15541,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	86217625	86321146	chr8:86217625-86321146	0	-	86217625	86217625	8553170	4	206,132,155,85,	0,5346,64678,103436,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	86333273	86343314	chr8:86333273-86343314	3	-	86333273	86333273	8553170	4	926,59,268,233,	0,2429,4846,9808,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	86333436	86343270	chr8:86333436-86343270	0	-	86333436	86333436	8553170	3	763,2685,189,	0,2266,9645,
#Partially deleted in new
chr8	86342737	86468503	chr8:86342737-86468503	3	+	86374050	86466893	0	25	193,93,91,139,125,138,67,185,337,96,175,55,85,129,76,72,89,160,134,141,121,105,97,73,1710,	0,26201,31292,37988,38767,55604,55834,59281,68800,82485,84905,87959,88668,88877,92714,92895,95847,99881,105410,105635,109821,115183,118486,119036,124056,
#Partially deleted in new
chr8	86374040	86467476	chr8:86374040-86467476	1	+	86374050	86466893	0	23	80,139,125,138,67,185,337,96,175,55,85,129,76,72,89,160,134,141,121,105,97,73,683,	0,6685,7464,24301,24531,27978,37497,51182,53602,56656,57365,57574,61411,61592,64544,68578,74107,74332,78518,83880,87183,87733,92753,
#Partially deleted in new
chr8	86380816	86448497	chr8:86380816-86448497	0	+	86380816	86380816	8553170	15	48,125,138,67,337,96,175,55,85,129,76,72,89,160,350,	0,688,17525,17755,30721,44406,46826,49880,50589,50798,54635,54816,57768,61802,67331,
#Partially deleted in new
chr8	86405054	86430703	chr8:86405054-86430703	0	+	86405054	86405054	8553170	5	66,337,96,175,7,	0,6483,20168,22588,25642,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	86417222	86431665	chr8:86417222-86431665	0	+	86417222	86417222	8553170	6	57,96,175,55,85,51,	0,8000,10420,13474,14183,14392,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	86435457	86448435	chr8:86435457-86448435	0	+	86435457	86448435	789624	7	70,72,89,108,160,134,63,	0,175,3127,5168,7161,12690,12915,
#Partially deleted in new
chr8	86435610	86452581	chr8:86435610-86452581	0	+	86435610	86435610	8553170	6	94,89,160,134,141,23,	0,2974,7008,12537,12762,16948,
#Partially deleted in new
chr8	86442271	86452596	chr8:86442271-86452596	0	+	86442271	86442271	8553170	4	507,134,141,38,	0,5876,6101,10287,
#Partially deleted in new
chr8	86457988	86461742	chr8:86457988-86461742	0	+	86457988	86457988	8553170	2	37,519,	0,3235,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	86461226	86478420	chr8:86461226-86478420	0	+	86461226	86478075	789624	3	94,73,346,	0,547,16848,
#Partially deleted in new
chr8	86468256	86479011	chr8:86468256-86479011	0	-	86468675	86479011	789624	5	451,193,134,31,89,	0,1961,6563,9037,10666,
#Partially deleted in new
chr8	86468267	86474914	chr8:86468267-86474914	0	-	86468319	86474914	789624	3	156,193,95,	0,1950,6552,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	86472349	86508780	chr8:86472349-86508780	3	-	86474307	86508620	789624	10	2009,134,31,88,56,90,160,88,118,289,	0,2470,4944,6573,7927,12522,14134,16202,34645,36142,
#Partially deleted in new
chr8	86474020	86508681	chr8:86474020-86508681	1	-	86474307	86508620	789624	9	338,95,31,88,56,160,88,118,190,	0,799,3273,4902,6256,12463,14531,32974,34471,
#Partially deleted in new
chr8	86474108	86475050	chr8:86474108-86475050	0	-	86474108	86474108	8553170	2	250,231,	0,711,
#Partially deleted in new
chr8	86474111	86508675	chr8:86474111-86508675	1	-	86474307	86508620	789624	9	247,134,31,88,56,160,88,118,184,	0,708,3182,4811,6165,12372,14440,32883,34380,
#Partially deleted in new
chr8	86474245	86477453	chr8:86474245-86477453	0	-	86474245	86474245	8553170	3	113,134,160,	0,574,3048,
#Partially deleted in new
chr8	86474248	86486570	chr8:86474248-86486570	0	-	86474307	86486570	789624	7	110,95,31,88,56,90,87,	0,571,3045,4674,6028,10623,12235,
#Partially deleted in new
chr8	86474411	86480334	chr8:86474411-86480334	0	-	86474645	86480334	789624	5	246,134,31,88,58,	0,408,2882,4511,5865,
#Partially deleted in new
chr8	86478759	86488559	chr8:86478759-86488559	0	-	86478759	86478759	8553170	5	251,56,90,160,8,	0,1517,6112,7724,9792,
#Partially deleted in new
chr8	86478824	86486499	chr8:86478824-86486499	0	-	86478824	86478824	8553170	3	186,56,16,	0,1452,7659,
#Partially deleted in new
chr8	86478970	86508293	chr8:86478970-86508293	0	-	86505365	86507109	789624	8	40,56,90,160,88,80,118,178,	0,1306,5901,7513,9581,26329,28024,29145,
#Partially deleted in new
chr8	86481753	86483002	chr8:86481753-86483002	7	-	86481753	86481753	16724991	2	366,574,	0,675,
#Partially deleted in new
chr8	86486561	86508429	chr8:86486561-86508429	0	-	86486561	86507109	789624	4	82,88,118,314,	0,1990,20433,21554,
#Deleted in new
chr8	86503590	86505061	chr8:86503590-86505061	7	+	86503590	86503590	16724991	1	1471,	0,
#Partially deleted in new
chr8	86504829	86508619	chr8:86504829-86508619	0	-	86504829	86504829	8553170	3	550,118,128,	0,2165,3662,
#Partially deleted in new
chr8	86514426	86561498	chr8:86514426-86561498	3	+	86528545	86558410	789624	17	115,38,142,180,75,72,84,90,99,87,60,134,55,52,134,237,3211,	0,1035,14109,14518,16728,18082,23136,25818,30313,32168,33284,33874,36619,36756,40424,41675,43861,
#Partially deleted in new
chr8	86514436	86544808	chr8:86514436-86544808	0	+	86528545	86544808	789624	8	105,142,180,75,72,84,90,69,	0,14099,14508,16718,18072,23126,25808,30303,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	86514437	86532528	chr8:86514437-86532528	0	+	86528545	86532528	789624	7	104,38,121,142,180,75,20,	0,1024,10439,14098,14507,16717,18071,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	86514442	86528571	chr8:86514442-86528571	0	+	86528545	86528571	789624	4	99,38,106,36,	0,1019,10266,14093,
#Deleted in new
chr8	86514445	86515201	chr8:86514445-86515201	0	+	86514445	86514445	8553170	2	96,60,	0,696,
#Partially deleted in new
chr8	86514458	86532539	chr8:86514458-86532539	0	+	86528545	86532539	789624	6	115,38,142,180,75,31,	0,1003,14077,14486,16696,18050,
#Partially deleted in new
chr8	86514503	86532580	chr8:86514503-86532580	0	+	86528545	86532580	789624	7	38,38,111,142,180,75,72,	0,958,7100,14032,14441,16651,18005,
#Partially deleted in new
chr8	86514561	86529049	chr8:86514561-86529049	0	+	86528545	86529049	789624	4	161,38,142,105,	0,900,13974,14383,
#Partially deleted in new
chr8	86529062	86551233	chr8:86529062-86551233	0	+	86529062	86551233	789624	10	62,75,72,90,99,87,60,134,55,51,	0,2092,3446,11182,15677,17532,18648,19238,21983,22120,
#Partially deleted in new
chr8	86540274	86545333	chr8:86540274-86545333	0	+	86540274	86540274	8553170	2	60,594,	0,4465,
#Partially deleted in new
chr8	86546627	86554979	chr8:86546627-86554979	0	+	86546627	86546627	8553170	5	54,60,134,189,129,	0,1083,1673,4418,8223,
#Partially deleted in new
chr8	86547305	86561411	chr8:86547305-86561411	0	+	86547305	86547305	8553170	7	465,134,55,52,134,237,3124,	0,995,3740,3877,7545,8796,10982,
#Deleted in new
chr8	86551004	86551512	chr8:86551004-86551512	0	+	86551004	86551004	8553170	2	96,330,	0,178,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	86553976	86579206	chr8:86553976-86579206	0	-	86569327	86579206	789624	4	150,74,175,101,	0,15337,24712,25129,
#Partially deleted in new
chr8	86573934	86743675	chr8:86573934-86743675	3	-	86575803	86743627	789624	18	2196,175,147,119,84,98,160,142,123,65,87,51,209,150,155,127,82,177,	0,4754,5171,30158,37653,52048,54984,58817,69816,70687,73866,80077,92990,94084,97009,152596,165720,169564,
#Deleted in new
chr8	86593754	86594589	chr8:86593754-86594589	7	-	86593754	86593754	16724991	1	835,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	86657387	86660293	chr8:86657387-86660293	7	-	86657387	86657387	16724991	1	2906,	0,
#Deleted in new
chr8	86660524	86661922	chr8:86660524-86661922	7	-	86660524	86660524	16724991	3	262,154,484,	0,656,914,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	86703948	86743609	chr8:86703948-86743609	0	-	86703948	86703948	8553170	4	454,127,82,111,	0,22582,35706,39550,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	86707546	86765023	chr8:86707546-86765023	3	+	86707546	86707546	8553170	3	448,125,231,	0,53289,57246,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	86765934	86818558	chr8:86765934-86818558	3	+	86765934	86765934	8553170	6	163,178,108,84,112,116,	0,6361,17938,49299,50578,52508,
#Deleted in new
chr8	86776478	86776638	chr8:86776478-86776638	7	-	86776478	86776478	16724991	1	160,	0,
#Partially deleted in new
chr8	86866441	86939816	chr8:86866441-86939816	0	+	86866441	86866441	8553170	4	142,70,114,221,	0,21100,38639,73154,
#Partially deleted in new
chr8	86866444	87382859	chr8:86866444-87382859	3	+	86866495	87382627	789624	11	139,70,114,159,146,194,138,133,110,151,240,	0,21097,38636,73151,339548,370474,418233,420094,485240,487191,516175,
#Partially deleted in new
chr8	87205993	87353876	chr8:87205993-87353876	1	+	87205993	87353876	789624	7	145,194,138,133,110,151,5,	0,30925,78684,80545,145691,147642,147878,
#Partially deleted in new
chr8	87206047	87237267	chr8:87206047-87237267	0	+	87206047	87206047	8553170	2	91,349,	0,30871,
#Partially deleted in new
chr8	87286554	87487740	chr8:87286554-87487740	0	+	87286554	87487704	789624	6	117,110,151,68,60,153,	0,65130,67081,141991,184693,201033,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	87351732	87615219	chr8:87351732-87615219	0	+	87351732	87612063	789624	8	62,151,68,60,46,40,89,135,	0,1903,76813,119515,258076,258806,260273,263352,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	87540834	87755695	chr8:87540834-87755695	3	-	87540834	87540834	8553170	4	1655,50,111,44,	0,95766,210372,214817,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	87566169	87733843	chr8:87566169-87733843	0	-	87566169	87566169	8553170	4	812,50,113,69,	0,70431,80747,167605,
#Deleted in new
chr8	87575597	87576508	chr8:87575597-87576508	7	-	87575597	87575597	16724991	1	911,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	87598461	87601634	chr8:87598461-87601634	7	-	87598461	87598461	16724991	1	3173,	0,
#Deleted in new
chr8	87788561	87789688	chr8:87788561-87789688	7	-	87788561	87788561	16724991	1	1127,	0,
#Deleted in new
chr8	87867600	87868607	chr8:87867600-87868607	7	+	87867600	87867600	16724991	1	1007,	0,
#Deleted in new
chr8	87870742	87874068	chr8:87870742-87874068	3	-	87872783	87873971	789624	1	3326,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	87974164	88019113	chr8:87974164-88019113	3	+	87974164	87974164	8553170	6	143,77,64,187,118,58,	0,29562,35978,36352,37919,44891,
#Partially deleted in new
chr8	88032008	88327488	chr8:88032008-88327488	3	-	88041460	88327206	0	10	9787,116,151,139,212,162,305,123,149,414,	0,14660,24119,42596,84498,86691,135660,154467,165149,295066,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	88069232	88327206	chr8:88069232-88327206	0	-	88069232	88069232	8553170	8	290,139,212,162,305,123,149,132,	0,5372,47274,49467,98436,117243,127925,257842,
#Partially deleted in new
chr8	88167922	88328025	chr8:88167922-88328025	0	-	88167922	88327980	789624	5	51,123,149,112,116,	0,18553,29235,159152,159987,
#Partially deleted in new
chr8	88186324	88327256	chr8:88186324-88327256	0	-	88186324	88186324	8553170	3	274,149,182,	0,10833,140750,
#Partially deleted in new
chr8	88326835	88542751	chr8:88326835-88542751	1	+	88326835	88326835	8553170	3	357,68,72,	0,2093,215844,
#Deleted in new
chr8	88327843	88329467	chr8:88327843-88329467	0	+	88327843	88327843	8553170	2	55,539,	0,1085,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	88327843	88709540	chr8:88327843-88709540	1	+	88327843	88327843	8553170	5	55,124,131,58,211,	0,1085,214836,372448,381486,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	88396436	88396547	chr8:88396436-88396547	7	-	88396436	88396436	16724991	1	111,	0,
#Deleted in new
chr8	88485109	88486094	chr8:88485109-88486094	7	+	88485109	88485109	16724991	2	671,185,	0,800,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	88542603	88709727	chr8:88542603-88709727	0	+	88542603	88542603	8553170	2	156,398,	0,166726,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	88542616	88709691	chr8:88542616-88709691	0	+	88542616	88542616	8553170	2	214,362,	0,166713,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	88542727	88887323	chr8:88542727-88887323	3	+	88542727	88542727	8553170	8	83,58,31,77,200,125,60,1927,	0,157564,257121,282936,308573,330965,333446,342669,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	88700290	88737134	chr8:88700290-88737134	1	+	88700290	88700290	8553170	2	59,1410,	0,35434,
#Deleted in new
chr8	88808317	88808908	chr8:88808317-88808908	3	-	88808317	88808317	8553170	1	591,	0,
#Deleted in new
chr8	89243400	89243793	chr8:89243400-89243793	7	-	89243400	89243400	16724991	1	393,	0,
#Partially deleted in new
chr8	89412620	89415071	chr8:89412620-89415071	7	-	89412620	89412620	16724991	2	499,955,	0,1496,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	89609408	89757727	chr8:89609408-89757727	3	-	89609408	89609408	8553170	7	86,37,206,123,145,118,683,	0,2025,2375,5774,18746,19745,147636,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	89611355	89617157	chr8:89611355-89617157	1	-	89611355	89611355	8553170	3	634,123,79,	0,3827,5723,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	89616928	89620875	chr8:89616928-89620875	1	-	89616928	89616928	8553170	2	228,193,	0,3754,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	89616992	89623204	chr8:89616992-89623204	1	-	89616992	89616992	8553170	2	164,120,	0,6092,
#Deleted in new
chr8	89717398	89721200	chr8:89717398-89721200	1	-	89717398	89717398	8553170	1	3802,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	89717427	89757711	chr8:89717427-89757711	1	-	89717427	89717427	789624	5	301,142,338,124,667,	0,4587,7201,8090,39617,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	89720903	89724930	chr8:89720903-89724930	1	-	89720903	89720903	8553170	3	471,142,302,	0,1111,3725,
#Deleted in new
chr8	89720943	89722350	chr8:89720943-89722350	1	-	89720943	89720943	8553170	2	431,336,	0,1071,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	89756234	89757364	chr8:89756234-89757364	1	-	89756234	89756234	8553170	2	376,320,	0,810,
#Partially deleted in new
chr8	89757746	89791063	chr8:89757746-89791063	3	+	89758060	89790416	0	11	487,154,156,158,50,162,86,90,94,162,985,	0,5082,7594,12025,13994,14920,22328,26303,28846,31574,32332,
#Partially deleted in new
chr8	89757805	89790608	chr8:89757805-89790608	0	+	89758060	89765374	789624	10	428,156,158,50,162,86,90,94,162,530,	0,7535,11966,13935,14861,22269,26244,28787,31515,32273,
#Partially deleted in new
chr8	89757816	89762858	chr8:89757816-89762858	0	+	89758060	89759361	789624	3	417,125,30,	0,1505,5012,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	89780087	89780778	chr8:89780087-89780778	0	+	89780087	89780087	8553170	2	73,408,	0,283,
#Partially deleted in new
chr8	89823547	89823802	chr8:89823547-89823802	7	-	89823547	89823547	16724991	1	255,	0,
#Partially deleted in new
chr8	89826592	89833564	chr8:89826592-89833564	7	+	89826592	89826592	16724991	3	99,148,114,	0,3657,6858,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	89900720	89900824	chr8:89900720-89900824	3	-	89900720	89900720	8553170	1	104,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	89901848	89927853	chr8:89901848-89927853	1	+	89909654	89925532	789624	6	63,155,137,192,92,3351,	0,7718,12228,12706,19231,22654,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	89901858	89927868	chr8:89901858-89927868	3	+	89909654	89925532	789624	6	267,155,137,192,92,3366,	0,7708,12218,12696,19221,22644,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	89902533	89927888	chr8:89902533-89927888	1	+	89902793	89925532	789624	6	304,155,137,192,92,3386,	0,7033,11543,12021,18546,21969,
#Partially deleted in new
chr8	89902760	89921319	chr8:89902760-89921319	1	+	89902793	89921175	789624	5	77,155,137,192,240,	0,6806,11316,11794,18319,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr8	89933335	89984716	chr8:89933335-89984716	3	-	89935581	89984561	0	16	2277,50,114,156,69,448,273,130,98,194,118,104,160,149,134,192,	0,3690,9917,12804,14488,19908,21947,25389,31074,37028,37837,44884,47398,48039,49386,51189,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr8	89933335	90003228	chr8:89933335-90003228	0	-	89981996	89984561	789624	19	2277,50,114,156,69,448,273,130,98,194,118,104,160,149,50,134,209,57,117,	0,3690,9917,12804,14488,19908,21947,25389,31074,37028,37837,44884,47398,48039,48617,49386,51189,51581,69776,
#Partially deleted in new
chr8	89933483	89984404	chr8:89933483-89984404	1	-	89935581	89981448	789624	16	2129,50,114,156,69,448,273,130,98,194,118,104,160,149,134,197,	0,3542,9769,12656,14340,19760,21799,25241,30926,36880,37689,44736,47250,47891,49238,50724,
#Partially deleted in new
chr8	89935170	89953354	chr8:89935170-89953354	0	-	89935581	89953354	789624	5	442,50,114,69,111,	0,1855,8082,12653,18073,
#Partially deleted in new
chr8	89935431	89937347	chr8:89935431-89937347	0	-	89935431	89935431	8553170	2	181,322,	0,1594,
#Partially deleted in new
chr8	89943358	89946625	chr8:89943358-89946625	0	-	89943358	89943358	8553170	2	8,486,	0,2781,
#Partially deleted in new
chr8	89970518	89984619	chr8:89970518-89984619	0	-	89970518	89984561	789624	5	39,118,149,134,95,	0,654,10856,12203,14006,
#Partially deleted in new
chr8	89970519	89981655	chr8:89970519-89981655	0	-	89970519	89981448	789624	5	38,118,104,160,281,	0,653,7700,10214,10855,
#Partially deleted in new
chr8	89978277	89984619	chr8:89978277-89984619	0	-	89981996	89984561	789624	6	46,119,149,50,134,95,	0,2456,3097,3675,4444,6247,
#Partially deleted in new
chr8	89978281	89984237	chr8:89978281-89984237	0	-	89978281	89981448	789624	6	42,160,149,50,134,30,	0,2452,3093,3671,4440,5926,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	89982403	89984665	chr8:89982403-89984665	0	-	89982403	89982403	8553170	2	452,141,	0,2121,
#Partially deleted in new
chr8	90001404	90052008	chr8:90001404-90052008	3	+	90001492	90051897	0	10	157,203,58,87,148,100,73,147,63,171,	0,15719,17504,17681,19504,35436,41323,43444,50272,50433,
#Partially deleted in new
chr8	90001404	90051920	chr8:90001404-90051920	0	+	90001492	90018965	789624	8	157,58,87,148,73,147,63,83,	0,17504,17681,19504,41323,43444,50272,50433,
#Partially deleted in new
chr8	90001445	90042748	chr8:90001445-90042748	0	+	90001492	90017280	789624	7	116,124,58,87,148,100,21,	0,15757,17463,17640,19463,35395,41282,
#Partially deleted in new
chr8	90001457	90037021	chr8:90001457-90037021	0	+	90001492	90018965	789624	5	104,58,87,148,181,	0,17451,17628,19451,35383,
#Partially deleted in new
chr8	90001462	90044985	chr8:90001462-90044985	0	+	90001462	90001462	8553170	8	99,25,58,87,148,100,73,137,	0,15839,17446,17623,19446,35378,41265,43386,
#Partially deleted in new
chr8	90001475	90051972	chr8:90001475-90051972	0	+	90001492	90018965	789624	9	86,58,87,148,100,73,147,63,135,	0,17433,17610,19433,35365,41252,43373,50201,50362,
#Partially deleted in new
chr8	90001475	90036885	chr8:90001475-90036885	0	+	90005366	90036885	789624	7	86,78,203,58,87,148,45,	0,3816,15648,17433,17610,19433,35365,
#Partially deleted in new
chr8	90001476	90029464	chr8:90001476-90029464	0	+	90001476	90001476	8553170	6	85,203,58,87,148,181,	0,15647,17432,17609,19432,27807,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	90001476	90006233	chr8:90001476-90006233	0	+	90001476	90001476	8553170	3	85,284,198,	0,3971,4559,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	90001476	90051999	chr8:90001476-90051999	1	+	90006235	90051897	0	12	85,398,242,203,58,87,148,100,73,147,63,162,	0,3971,4559,15647,17432,17609,19432,35364,41251,43372,50200,50361,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	90001477	90017169	chr8:90001477-90017169	0	+	90001477	90001477	8553170	3	84,398,38,	0,3970,15654,
#Partially deleted in new
chr8	90001479	90020912	chr8:90001479-90020912	0	+	90001492	90018831	789624	5	82,203,151,87,4,	0,15644,17336,17606,19429,
#Partially deleted in new
chr8	90001487	90036918	chr8:90001487-90036918	0	+	90015624	90036918	789624	7	74,126,203,58,87,148,78,	0,14053,15636,17421,17598,19421,35353,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	90001516	90036879	chr8:90001516-90036879	0	+	90017204	90036879	789624	7	45,284,203,58,87,148,39,	0,3931,15607,17392,17569,19392,35324,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	90016733	90018966	chr8:90016733-90018966	0	+	90016733	90016733	8553170	2	593,58,	0,2175,
#Partially deleted in new
chr8	90018563	90036881	chr8:90018563-90036881	0	+	90018563	90018563	8553170	4	403,87,148,41,	0,522,2345,18277,
#Partially deleted in new
chr8	90030454	90051847	chr8:90030454-90051847	0	+	90030454	90030454	8553170	6	71,100,73,147,63,10,	0,6386,12273,14394,21222,21383,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	90042478	90051950	chr8:90042478-90051950	0	+	90042478	90042478	8553170	4	322,147,63,113,	0,2370,9198,9359,
#Partially deleted in new
chr8	90042732	90052092	chr8:90042732-90052092	0	+	90042732	90051684	789624	4	68,55,63,255,	0,2299,8944,9105,
#Partially deleted in new
chr8	90058607	90082879	chr8:90058607-90082879	3	-	90060172	90082697	789624	11	1679,72,54,40,56,78,57,84,75,77,261,	0,2021,4492,4673,4798,7290,10390,10546,19765,23418,24011,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	90058607	90064468	chr8:90058607-90064468	0	-	90058607	90058607	8553170	3	1679,2525,1188,	0,2021,4673,
#Partially deleted in new
chr8	90059418	90081521	chr8:90059418-90081521	1	-	90060172	90078432	789624	10	868,72,54,40,56,78,57,84,75,106,	0,1210,3681,3862,3987,6479,9579,9735,18954,21997,
#Deleted in new
chr8	90060169	90061312	chr8:90060169-90061312	0	-	90060169	90060169	8553170	2	117,684,	0,459,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	90062627	90063430	chr8:90062627-90063430	0	-	90062627	90062627	8553170	3	526,40,25,	0,653,778,
#Partially deleted in new
chr8	90069003	90082871	chr8:90069003-90082871	0	-	90069003	90069003	8553170	5	51,84,75,363,253,	0,150,9369,13022,13615,
#Partially deleted in new
chr8	90069168	90082415	chr8:90069168-90082415	0	-	90069168	90069168	8553170	3	69,75,390,	0,9204,12857,
#Deleted in new
chr8	90078310	90082583	chr8:90078310-90082583	0	-	90078310	90078310	8553170	2	137,558,	0,3715,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	90221487	90388145	chr8:90221487-90388145	3	+	90221487	90221487	8553170	4	23,100,91,579,	0,159,24692,166079,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	90221487	90387988	chr8:90221487-90387988	0	+	90221487	90221487	8553170	3	259,91,422,	0,24692,166079,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	90221516	90569318	chr8:90221516-90569318	0	+	90221516	90221516	8553170	4	230,91,115,184,	0,24663,232892,347618,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	90221537	90387952	chr8:90221537-90387952	1	+	90221537	90221537	789624	4	209,91,126,386,	0,24642,130003,166029,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	90511127	90511240	chr8:90511127-90511240	7	+	90511127	90511127	16724991	1	113,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	90592803	90606065	chr8:90592803-90606065	3	-	90592803	90592803	789624	3	300,140,298,	0,1028,12964,
#Partially deleted in new
chr8	90621994	90645905	chr8:90621994-90645905	1	-	90625670	90645905	789624	2	3868,795,	0,23116,
#Partially deleted in new
chr8	90621994	90646083	chr8:90621994-90646083	3	-	90625670	90645905	789624	3	3868,156,973,	0,9557,23116,
#Partially deleted in new
chr8	90625090	90645512	chr8:90625090-90645512	0	-	90625670	90645512	789624	2	772,402,	0,20020,
#Partially deleted in new
chr8	90631565	90791632	chr8:90631565-90791632	0	-	90631565	90703405	789624	4	142,129,121,195,	0,71828,77870,159872,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	90646440	90651757	chr8:90646440-90651757	1	+	90646440	90646440	8553170	2	193,3280,	0,2037,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	90646457	90648741	chr8:90646457-90648741	0	+	90646457	90646457	8553170	2	426,264,	0,2020,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	90648747	90656598	chr8:90648747-90656598	3	+	90648747	90648747	8553170	3	118,159,85,	0,2656,7766,
#Duplicated in new
chr8	90683815	90709556	chr8:90683815-90709556	0	-	90683815	90683815	8553170	4	215,132,129,121,	0,6628,19578,25620,
#Duplicated in new
chr8	90683950	90791595	chr8:90683950-90791595	0	-	90683950	90683950	8553170	4	80,129,121,158,	0,19443,25485,107487,
#Deleted in new
chr8	90701081	90701876	chr8:90701081-90701876	7	+	90701081	90701081	16724991	2	258,310,	0,485,
#Partially deleted in new
chr8	90791549	90959408	chr8:90791549-90959408	3	+	90791886	90955512	789624	13	436,25,109,26,98,137,122,77,54,113,78,92,3922,	0,10141,33167,80578,89483,125942,133985,136673,142754,149236,158257,159563,163937,
#Partially deleted in new
chr8	90791740	90825102	chr8:90791740-90825102	0	+	90791740	90791740	8553170	3	245,25,386,	0,9950,32976,
#Partially deleted in new
chr8	90791809	90903921	chr8:90791809-90903921	0	+	90791809	90791809	8553170	6	176,25,109,26,98,56,	0,9881,32907,80318,89223,112056,
#Partially deleted in new
chr8	90791809	90872479	chr8:90791809-90872479	0	+	90791809	90791809	8553170	4	176,25,109,352,	0,9881,32907,80318,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	90806473	90859240	chr8:90806473-90859240	3	-	90806473	90806473	8553170	4	256,139,256,182,	0,6182,6431,52585,
#Partially deleted in new
chr8	90940191	90955818	chr8:90940191-90955818	1	+	90940791	90955512	789624	5	196,113,78,92,332,	0,594,9615,10921,15295,
#Partially deleted in new
chr8	90940521	90957847	chr8:90940521-90957847	1	+	90940791	90955512	789624	4	377,78,92,2361,	0,9285,10591,14965,
#Partially deleted in new
chr8	90958636	90985257	chr8:90958636-90985257	3	-	90959006	90980435	789624	6	394,107,76,74,99,144,	0,2105,12429,19942,21726,26477,
#Partially deleted in new
chr8	90993795	91041064	chr8:90993795-91041064	3	-	90995676	91040749	789624	7	2025,91,53,124,107,149,421,	0,2858,14947,24594,26361,27460,46848,
#Partially deleted in new
chr8	90995523	91040851	chr8:90995523-91040851	0	-	90996729	91040749	789624	4	297,91,53,208,	0,1130,13219,45120,
#Partially deleted in new
chr8	90995592	91040811	chr8:90995592-91040811	0	-	90996729	91040749	789624	6	228,91,124,107,149,168,	0,1061,22797,24564,25663,45051,
#Partially deleted in new
chr8	90995716	91040835	chr8:90995716-91040835	0	-	90995716	91040749	789624	7	104,91,53,124,107,167,192,	0,937,13026,22673,24440,25539,44927,
#Partially deleted in new
chr8	90995810	91040872	chr8:90995810-91040872	0	-	91024301	91040749	789624	8	10,91,53,124,107,149,78,229,	0,843,12932,22579,24346,25445,28478,44833,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	91016587	91018655	chr8:91016587-91018655	3	+	91016587	91016587	8553170	2	151,247,	0,1821,
#Partially deleted in new
chr8	91024301	91040749	chr8:91024301-91040749	1	-	91024301	91040749	789624	2	65,106,	0,16342,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	91042689	91044762	chr8:91042689-91044762	3	-	91042689	91042689	8553170	3	266,144,142,	0,842,1931,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	91043467	91044733	chr8:91043467-91044733	0	-	91043467	91043467	8553170	2	208,113,	0,1153,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	91059908	91070123	chr8:91059908-91070123	3	-	91059908	91059908	789624	3	3838,244,193,	0,9670,10022,
#Deleted in new
chr8	91067910	91070189	chr8:91067910-91070189	1	-	91067910	91067910	789624	2	1912,259,	0,2020,
#Partially deleted in new
chr8	91070195	91087095	chr8:91070195-91087095	3	+	91070294	91084868	789624	7	271,152,81,313,62,107,2312,	0,942,3635,8160,10473,13812,14588,
#Partially deleted in new
chr8	91070195	91087091	chr8:91070195-91087091	1	+	91076719	91084868	789624	8	271,152,81,140,313,62,107,2308,	0,942,3635,6396,8160,10473,13812,14588,
#Partially deleted in new
chr8	91070195	91087091	chr8:91070195-91087091	1	+	91070294	91084868	789624	7	271,152,81,313,62,107,2308,	0,942,3635,8160,10473,13812,14588,
#Partially deleted in new
chr8	91070324	91085417	chr8:91070324-91085417	0	+	91070384	91076603	789624	8	142,152,81,140,313,62,107,634,	0,813,3506,6267,8031,10344,13683,14459,
#Partially deleted in new
chr8	91070361	91079207	chr8:91070361-91079207	0	+	91070361	91070361	8553170	5	105,152,81,140,852,	0,776,3469,6230,7994,
#Partially deleted in new
chr8	91070363	91085054	chr8:91070363-91085054	1	+	91070384	91084868	789624	7	103,152,81,313,62,107,271,	0,774,3467,7992,10305,13644,14420,
#Deleted in new
chr8	91101831	91102813	chr8:91101831-91102813	0	+	91102661	91102813	789624	2	416,155,	0,827,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr8	91102618	91219236	chr8:91102618-91219236	0	+	91102661	91118250	789624	11	226,329,73,119,78,196,72,102,180,139,347,	0,15605,24469,27680,28140,30491,33049,86903,97994,104074,116271,
#Partially deleted in new
chr8	91102644	91219127	chr8:91102644-91219127	1	+	91102661	91219000	789624	4	200,102,180,238,	0,86877,97968,116245,
#Partially deleted in new
chr8	91102661	91219000	chr8:91102661-91219000	3	+	91102661	91219000	789624	8	183,127,73,196,72,102,180,111,	0,21831,24426,30448,33006,86860,97951,116228,
#Partially deleted in new
chr8	91102720	91124783	chr8:91102720-91124783	0	+	91102720	91102720	8553170	2	124,291,	0,21772,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	91135680	91139195	chr8:91135680-91139195	0	+	91135680	91135680	8553170	2	59,429,	0,3086,
#Partially deleted in new
chr8	91157284	91158748	chr8:91157284-91158748	7	+	91157284	91157284	16724991	1	1464,	0,
#Partially deleted in new
chr8	91205484	91205559	chr8:91205484-91205559	3	+	91205484	91205484	5263520	1	75,	0,
#Partially deleted in new
chr8	91209493	91395649	chr8:91209493-91395649	0	+	91249651	91340418	789624	19	49,116,226,111,173,165,153,148,114,78,96,107,67,138,49,101,55,104,588,	0,9396,40125,79642,86037,108722,124801,130910,133859,142316,143407,152859,153978,157086,160291,179844,184303,184442,185568,
#Partially deleted in new
chr8	91209494	91318359	chr8:91209494-91318359	0	+	91249651	91318359	789624	6	48,116,226,111,173,144,	0,9395,40124,79641,86036,108721,
#Partially deleted in new
chr8	91209499	91395756	chr8:91209499-91395756	3	+	91249651	91395097	789624	20	43,116,306,111,173,165,153,83,148,114,78,96,107,67,138,49,101,55,104,695,	0,9390,40039,79636,86031,108716,124795,128650,130904,133853,142310,143401,152853,153972,157080,160285,179838,184297,184436,185562,
#Partially deleted in new
chr8	91218887	91398152	chr8:91218887-91398152	1	+	91340428	91395097	789624	18	118,226,111,173,165,153,148,114,78,96,107,67,138,49,101,55,104,3091,	0,30731,70248,76643,99328,115407,121516,124465,132922,134013,143465,144584,147692,150897,170450,174909,175048,176174,
#Partially deleted in new
chr8	91218887	91398152	chr8:91218887-91398152	1	+	91249651	91395097	789624	19	118,306,111,173,165,153,83,148,114,78,96,107,67,138,49,101,55,104,3091,	0,30651,70248,76643,99328,115407,119262,121516,124465,132922,134013,143465,144584,147692,150897,170450,174909,175048,176174,
#Partially deleted in new
chr8	91249287	91398150	chr8:91249287-91398150	1	+	91249651	91395097	789624	19	126,306,111,173,165,153,83,148,114,78,96,107,67,138,49,101,55,104,3089,	0,251,39848,46243,68928,85007,88862,91116,94065,102522,103613,113065,114184,117292,120497,140050,144509,144648,145774,
#Partially deleted in new
chr8	91249306	91394718	chr8:91249306-91394718	1	+	91249651	91394274	789624	19	107,306,111,173,165,153,83,148,114,78,96,107,67,138,49,101,55,104,501,	0,232,39829,46224,68909,84988,88843,91097,94046,102503,103594,113046,114165,117273,120478,140031,144490,144629,144911,
#Partially deleted in new
chr8	91295623	91340658	chr8:91295623-91340658	0	+	91295623	91340635	789624	5	80,165,153,83,255,	0,22592,38671,42526,44780,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	91343029	91398138	chr8:91343029-91398138	0	+	91343029	91343029	8553170	12	154,114,78,96,107,67,138,49,101,55,104,3077,	0,323,8780,9871,19323,20442,23550,26755,46308,50767,50906,52032,
#Partially deleted in new
chr8	91357247	91393836	chr8:91357247-91393836	0	+	91357247	91357247	8553170	7	79,107,67,138,49,101,40,	0,5105,6224,9332,12537,32090,36549,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	91542923	91907619	chr8:91542923-91907619	3	-	91542923	91542923	8553170	4	11,80,127,346,	0,3451,230146,364350,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	91564979	91907453	chr8:91564979-91907453	1	-	91564979	91564979	8553170	4	162,130,105,180,	0,208090,296495,342294,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	91594964	91595241	chr8:91594964-91595241	3	+	91594964	91594964	8553170	1	277,	0,
#Deleted in new
chr8	91909737	91910167	chr8:91909737-91910167	7	-	91909737	91909737	16724991	1	430,	0,
#Deleted in new
chr8	91917506	91917918	chr8:91917506-91917918	7	+	91917506	91917506	16724991	1	412,	0,
#Partially deleted in new
chr8	91954966	92099688	chr8:91954966-92099688	1	-	91960241	92076052	0	12	5551,191,69,202,86,251,182,90,242,138,173,109,	0,15691,20938,31157,31920,36672,50149,56035,59612,62259,120998,144613,
#Partially deleted in new
chr8	91954966	92095654	chr8:91954966-92095654	1	-	91960241	92095467	789624	12	5551,191,69,202,86,251,182,90,242,138,144,308,	0,15691,20938,31157,31920,36672,50149,56035,59612,62259,140061,140380,
#Partially deleted in new
chr8	91954966	92095654	chr8:91954966-92095654	1	-	91960241	92076052	0	14	5551,191,69,202,86,251,182,90,242,138,173,60,144,308,	0,15691,20938,31157,31920,36672,50149,56035,59612,62259,120998,126267,140061,140380,
#Partially deleted in new
chr8	91954966	92095262	chr8:91954966-92095262	1	-	91960241	92062552	0	12	5551,191,69,202,86,251,182,90,242,138,164,235,	0,15691,20938,31157,31920,36672,50149,56035,59612,62259,107579,140061,
#Partially deleted in new
chr8	91954966	92095654	chr8:91954966-92095654	1	-	91960241	92076052	0	12	5551,191,69,202,86,251,182,90,242,138,173,308,	0,15691,20938,31157,31920,36672,50149,56035,59612,62259,120998,140380,
#Partially deleted in new
chr8	91954966	92103226	chr8:91954966-92103226	1	-	91960241	92102884	789624	11	5551,191,69,202,86,251,182,90,242,138,370,	0,15691,20938,31157,31920,36672,50149,56035,59612,62259,147890,
#Partially deleted in new
chr8	91954966	92095654	chr8:91954966-92095654	1	-	91960241	92076052	0	13	5551,191,69,202,86,251,182,90,242,138,173,144,308,	0,15691,20938,31157,31920,36672,50149,56035,59612,62259,120998,140061,140380,
#Partially deleted in new
chr8	91954974	92103226	chr8:91954974-92103226	3	-	91960241	92076052	0	12	5543,191,69,202,86,251,182,90,242,138,173,370,	0,15683,20930,31149,31912,36664,50141,56027,59604,62251,120990,147882,
#Partially deleted in new
chr8	91958923	92062963	chr8:91958923-92062963	1	-	91960241	92062552	0	11	1594,191,69,202,86,251,182,90,242,138,418,	0,11734,16981,27200,27963,32715,46192,52078,55655,58302,103622,
#Partially deleted in new
chr8	91959786	92095215	chr8:91959786-92095215	1	-	91960241	92017340	0	11	731,191,69,202,86,251,182,90,242,138,188,	0,10871,16118,26337,27100,31852,45329,51215,54792,57439,135241,
#Partially deleted in new
chr8	91959792	92017637	chr8:91959792-92017637	1	-	91960241	92017340	0	10	725,191,69,202,86,251,182,90,242,412,	0,10865,16112,26331,27094,31846,45323,51209,54786,57433,
#Partially deleted in new
chr8	91960130	92095611	chr8:91960130-92095611	1	-	91960241	92095467	0	11	387,191,69,202,86,251,182,90,242,138,265,	0,10527,15774,25993,26756,31508,44985,50871,54448,57095,135216,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	91960239	91971160	chr8:91960239-91971160	0	-	91960239	91960239	8553170	2	278,503,	0,10418,
#Partially deleted in new
chr8	91960241	92095613	chr8:91960241-92095613	1	-	91960241	92062552	0	15	276,191,69,202,86,251,182,90,242,138,82,173,60,144,267,	0,10416,15663,25882,26645,31397,44874,50760,54337,56984,102304,115723,120992,134786,135105,
#Partially deleted in new
chr8	91960440	91991728	chr8:91960440-91991728	0	-	91979926	91991728	789624	7	77,191,69,155,202,86,90,	0,10217,15464,19336,25683,26446,31198,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	91970770	92005174	chr8:91970770-92005174	0	-	91994590	92005174	789624	7	78,69,202,86,251,137,59,	0,5134,15353,16116,20868,23716,34345,
#Deleted in new
chr8	91975907	91977418	chr8:91975907-91977418	3	+	91975907	91975907	8553170	2	143,267,	0,1244,
#Partially deleted in new
chr8	91986916	92005160	chr8:91986916-92005160	0	-	92003329	92005160	789624	4	56,251,79,45,	0,4722,16385,18199,
#Partially deleted in new
chr8	91991670	92006768	chr8:91991670-92006768	0	-	91991670	91991670	8553170	2	219,1653,	0,13445,
#Partially deleted in new
chr8	92004421	92017363	chr8:92004421-92017363	1	-	92005111	92017340	789624	4	876,90,242,138,	0,6580,10157,12804,
#Partially deleted in new
chr8	92005165	92103228	chr8:92005165-92103228	0	-	92005165	92005165	8553170	2	132,372,	0,97691,
#Partially deleted in new
chr8	92005167	92095230	chr8:92005167-92095230	0	-	92005167	92076052	789624	6	130,90,242,138,173,203,	0,5834,9411,12058,70797,89860,
#Partially deleted in new
chr8	92005230	92019175	chr8:92005230-92019175	0	-	92005230	92017340	789624	5	67,90,242,138,48,	0,5771,9348,11995,13897,
#Partially deleted in new
chr8	92009645	92095262	chr8:92009645-92095262	0	-	92009645	92009645	8553170	4	1446,242,138,235,	0,4933,7580,85382,
#Partially deleted in new
chr8	92011052	92095654	chr8:92011052-92095654	0	-	92011052	92076052	789624	6	39,242,138,173,144,308,	0,3526,6173,64912,83975,84294,
#Partially deleted in new
chr8	92011087	92071387	chr8:92011087-92071387	0	-	92011087	92017340	789624	4	4,242,138,164,	0,3491,6138,60136,
#Partially deleted in new
chr8	92014578	92099656	chr8:92014578-92099656	0	-	92014578	92076052	789624	5	242,138,173,60,77,	0,2647,61386,66655,85001,
#Partially deleted in new
chr8	92014640	92095637	chr8:92014640-92095637	0	-	92014640	92076052	789624	4	180,138,173,291,	0,2585,61324,80706,
#Partially deleted in new
chr8	92014660	92095235	chr8:92014660-92095235	0	-	92014660	92017340	789624	3	160,206,208,	0,2565,80367,
#Partially deleted in new
chr8	92014660	92063623	chr8:92014660-92063623	0	-	92014660	92062552	789624	4	160,138,164,110,	0,2565,47885,48853,
#Partially deleted in new
chr8	92014669	92095236	chr8:92014669-92095236	0	-	92014669	92017340	789624	4	151,206,164,209,	0,2556,47876,80358,
#Partially deleted in new
chr8	92014685	92095478	chr8:92014685-92095478	0	-	92014685	92076052	789624	4	135,138,168,132,	0,2540,61279,80661,
#Partially deleted in new
chr8	92014687	92099688	chr8:92014687-92099688	0	-	92014687	92076052	789624	4	133,138,173,109,	0,2538,61277,84892,
#Partially deleted in new
chr8	92014724	92102907	chr8:92014724-92102907	0	-	92017408	92076052	789624	5	96,206,173,60,51,	0,2501,61240,66509,88132,
#Partially deleted in new
chr8	92014727	92095416	chr8:92014727-92095416	0	-	92014727	92062552	789624	5	93,138,82,173,70,	0,2498,47818,61237,80619,
#Partially deleted in new
chr8	92014746	92095450	chr8:92014746-92095450	0	-	92017408	92076052	789624	4	74,206,173,104,	0,2479,61218,80600,
#Partially deleted in new
chr8	92014756	92095235	chr8:92014756-92095235	0	-	92014756	92062552	789624	4	64,138,164,208,	0,2469,47789,80271,
#Partially deleted in new
chr8	92014765	92095482	chr8:92014765-92095482	0	-	92017408	92076052	789624	5	55,206,173,60,136,	0,2460,61199,66468,80581,
#Partially deleted in new
chr8	92014765	92095257	chr8:92014765-92095257	0	-	92014765	92076052	789624	4	55,138,173,230,	0,2460,61199,80262,
#Partially deleted in new
chr8	92014787	92102913	chr8:92014787-92102913	0	-	92062590	92076052	789624	5	33,138,164,173,57,	0,2438,47758,61177,88069,
#Partially deleted in new
chr8	92014791	92095510	chr8:92014791-92095510	0	-	92014791	92076052	789624	5	29,138,173,60,164,	0,2434,61173,66442,80555,
#Partially deleted in new
chr8	92014797	92103286	chr8:92014797-92103286	0	-	92014797	92017340	789624	3	23,138,430,	0,2428,88059,
#Partially deleted in new
chr8	92017247	92095230	chr8:92017247-92095230	0	-	92017247	92017247	8553170	4	116,77,173,203,	0,45298,58717,77780,
#Partially deleted in new
chr8	92017262	92095472	chr8:92017262-92095472	0	-	92017262	92017262	8553170	5	101,164,173,144,126,	0,45283,58702,77765,78084,
#Partially deleted in new
chr8	92017265	92095230	chr8:92017265-92095230	0	-	92017265	92017265	8553170	3	166,173,203,	0,58699,77762,
#Partially deleted in new
chr8	92017289	92095443	chr8:92017289-92095443	0	-	92017289	92076052	789624	5	74,173,60,144,97,	0,58675,63944,77738,78057,
#Partially deleted in new
chr8	92017292	92095482	chr8:92017292-92095482	0	-	92017292	92062552	789624	4	71,164,173,136,	0,45253,58672,78054,
#Partially deleted in new
chr8	92017303	92095229	chr8:92017303-92095229	0	-	92017303	92017303	8553170	4	128,173,60,202,	0,58661,63930,77724,
#Partially deleted in new
chr8	92017306	92095228	chr8:92017306-92095228	0	-	92017306	92076052	789624	4	57,173,60,201,	0,58658,63927,77721,
#Partially deleted in new
chr8	92017345	92095478	chr8:92017345-92095478	0	-	92017345	92017345	8553170	4	86,173,144,132,	0,58619,77682,78001,
#Partially deleted in new
chr8	92017345	92095235	chr8:92017345-92095235	0	-	92017345	92017345	8553170	4	86,164,173,208,	0,45200,58619,77682,
#Partially deleted in new
chr8	92017399	92095484	chr8:92017399-92095484	0	-	92017399	92017399	8553170	5	32,173,60,144,138,	0,58565,63834,77628,77947,
#Partially deleted in new
chr8	92062623	92095261	chr8:92062623-92095261	0	-	92062623	92076052	789624	4	86,173,60,234,	0,13341,18610,32404,
#Deleted in new
chr8	92144087	92144435	chr8:92144087-92144435	7	-	92144087	92144087	16724991	1	348,	0,
#Deleted in new
chr8	92351911	92352148	chr8:92351911-92352148	7	-	92351911	92351911	16724991	1	237,	0,
#Partially deleted in new
chr8	92403544	92413645	chr8:92403544-92413645	3	-	92403544	92403544	8553170	6	109,151,38,65,140,265,	0,390,4487,6331,6785,9836,
#Deleted in new
chr8	92420849	92421798	chr8:92420849-92421798	3	-	92420849	92420849	8553170	2	212,266,	0,683,
#Partially deleted in new
chr8	92460538	92655569	chr8:92460538-92655569	3	-	92460538	92460538	8553170	14	35,146,197,66,249,143,165,167,83,103,64,123,220,127,	0,1080,2423,5047,6325,11184,39217,40199,41821,56251,108464,167562,193403,194904,
#Partially deleted in new
chr8	92565442	92655494	chr8:92565442-92655494	1	-	92565442	92565442	789624	5	128,64,123,220,52,	0,3560,62658,88499,90000,
#Partially deleted in new
chr8	92668835	92677683	chr8:92668835-92677683	0	+	92668835	92668835	8553170	2	132,95,	0,8753,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	92668887	92679594	chr8:92668887-92679594	3	+	92668887	92668887	8553170	2	80,786,	0,9921,
#Partially deleted in new
chr8	92699741	92758542	chr8:92699741-92758542	1	-	92699741	92699741	8553170	3	248,120,39,	0,18657,58762,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	92712961	92877637	chr8:92712961-92877637	3	-	92712961	92712961	789624	4	3161,120,85,55,	0,5437,73014,164621,
#Deleted in new
chr8	92723023	92725111	chr8:92723023-92725111	3	-	92723023	92723023	8553170	2	161,109,	0,1979,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	92875220	92879502	chr8:92875220-92879502	0	-	92875220	92875220	8553170	1	4282,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	92882983	92965645	chr8:92882983-92965645	1	+	92882983	92882983	8553170	5	74,50,51,92,335,	0,3910,38432,44956,82327,
#Partially deleted in new
chr8	92883529	92966145	chr8:92883529-92966145	1	-	92886621	92916989	789624	5	3206,86,82,159,139,	0,8459,33399,70876,82477,
#Partially deleted in new
chr8	92883531	92966144	chr8:92883531-92966144	1	-	92886621	92916989	789624	4	3204,86,82,138,	0,8457,33397,82475,
#Partially deleted in new
chr8	92883634	92966144	chr8:92883634-92966144	1	-	92886621	92916989	789624	5	3101,86,79,159,138,	0,8354,33294,70771,82372,
#Partially deleted in new
chr8	92885319	93017673	chr8:92885319-93017673	3	-	92886621	92916989	789624	5	1416,86,82,159,65,	0,6669,31609,69086,132289,
#Partially deleted in new
chr8	92885319	92966123	chr8:92885319-92966123	1	-	92886649	92916989	789624	4	1348,86,79,117,	0,6669,31609,80687,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	92885334	92966111	chr8:92885334-92966111	1	-	92886621	92916989	789624	5	1401,86,79,158,105,	0,6654,31594,36168,80672,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	92885348	92966087	chr8:92885348-92966087	1	-	92886649	92916989	789624	6	1319,86,79,158,159,81,	0,6640,31580,36154,69057,80658,
#Partially deleted in new
chr8	92885350	92966129	chr8:92885350-92966129	0	-	92885350	92885350	8553170	4	1385,86,159,123,	0,6638,69055,80656,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	92885713	92966098	chr8:92885713-92966098	1	-	92886621	92916989	789624	6	1022,86,79,158,159,92,	0,6275,31215,35789,68692,80293,
#Partially deleted in new
chr8	92886232	92966109	chr8:92886232-92966109	1	-	92886649	92916989	789624	5	435,86,82,159,103,	0,5756,30696,68173,79774,
#Partially deleted in new
chr8	92886234	92966114	chr8:92886234-92966114	1	-	92886621	92916989	789624	4	501,86,79,108,	0,5754,30694,79772,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	92886389	92960534	chr8:92886389-92960534	0	-	92886389	92886389	8553170	4	346,78,159,34,	0,5599,68016,74111,
#Partially deleted in new
chr8	92886424	92966074	chr8:92886424-92966074	0	-	92886424	92886424	8553170	4	243,86,159,68,	0,5564,67981,79582,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	92886533	92966144	chr8:92886533-92966144	1	-	92886649	92916989	789624	5	134,86,82,158,138,	0,5455,30395,34969,79473,
#Partially deleted in new
chr8	92886554	92966036	chr8:92886554-92966036	1	-	92886621	92916989	789624	5	181,86,82,159,229,	0,5434,30374,67851,79253,
#Partially deleted in new
chr8	92886592	92965589	chr8:92886592-92965589	1	-	92886621	92916989	789624	5	143,86,82,159,85,	0,5396,30336,67813,78912,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	92886657	92965988	chr8:92886657-92965988	0	-	92886657	92916989	789624	6	78,86,82,159,219,181,	0,5331,30271,67748,73843,79150,
#Partially deleted in new
chr8	92886662	92966143	chr8:92886662-92966143	0	-	92886662	92916989	789624	5	95,86,82,159,137,	0,5326,30266,67743,79344,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	92916966	92966143	chr8:92916966-92966143	0	-	92916966	92916989	789624	4	41,159,219,137,	0,37439,43534,49040,
#Partially deleted in new
chr8	92922253	92966144	chr8:92922253-92966144	0	-	92922253	92922253	8553170	3	349,159,138,	0,32152,43753,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	92953414	92965488	chr8:92953414-92965488	0	-	92953414	92953414	8553170	3	1150,219,504,	0,7086,11570,
#Partially deleted in new
chr8	92954082	92966074	chr8:92954082-92966074	0	-	92954082	92954082	8553170	2	482,68,	0,11924,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	92963476	92966113	chr8:92963476-92966113	0	-	92963476	92963476	8553170	3	389,71,107,	0,1409,2530,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	92972574	92974738	chr8:92972574-92974738	7	+	92972574	92972574	16724991	1	2164,	0,
#Deleted in new
chr8	93029750	93029839	chr8:93029750-93029839	3	+	93029750	93029750	5263520	1	89,	0,
#Partially deleted in new
chr8	93134094	93166850	chr8:93134094-93166850	3	-	93134094	93134094	8553170	3	400,68,120,	0,649,32636,
#Deleted in new
chr8	93134241	93135435	chr8:93134241-93135435	0	-	93134241	93134241	8553170	3	253,68,61,	0,502,1133,
#Deleted in new
chr8	93134293	93134809	chr8:93134293-93134809	0	-	93134293	93134293	8553170	2	201,66,	0,450,
#Partially deleted in new
chr8	93213301	93292686	chr8:93213301-93292686	1	-	93213301	93213301	8553170	2	219,86,	0,79299,
#Partially deleted in new
chr8	93213309	93420880	chr8:93213309-93420880	1	-	93213309	93213309	8553170	6	211,110,82,214,59,114,	0,89615,126866,133383,149210,207457,
#Partially deleted in new
chr8	93213326	93250723	chr8:93213326-93250723	3	-	93213326	93213326	8553170	2	194,70,	0,37327,
#Partially deleted in new
chr8	93215924	93234878	chr8:93215924-93234878	3	-	93215924	93215924	8553170	4	220,119,136,57,	0,1524,12498,18897,
#Deleted in new
chr8	93229658	93229916	chr8:93229658-93229916	7	+	93229658	93229658	16724991	1	258,	0,
#Partially deleted in new
chr8	93259666	93297976	chr8:93259666-93297976	3	+	93259666	93259666	8553170	3	39,61,161,	0,33987,38149,
#Duplicated in new
chr8	93346466	93700433	chr8:93346466-93700433	1	-	93346466	93346466	789624	11	440,59,129,153,88,97,153,103,116,78,498,	0,16053,44070,44604,184751,217555,312960,316879,336076,336887,353469,
#Deleted in new
chr8	93441276	93441384	chr8:93441276-93441384	7	+	93441276	93441276	16724991	1	108,	0,
#Deleted in new
chr8	93646065	93647092	chr8:93646065-93647092	7	+	93646065	93646065	16724991	1	1027,	0,
#Partially deleted in new
chr8	93698560	93709779	chr8:93698560-93709779	0	+	93701407	93709779	789624	6	187,235,69,102,6,9,	0,2663,5059,6348,9450,11210,
#Partially deleted in new
chr8	93700251	93709873	chr8:93700251-93709873	0	+	93701407	93709873	789624	6	37,235,69,102,6,103,	0,972,3368,4657,7759,9519,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	93700506	93728456	chr8:93700506-93728456	0	+	93700647	93727169	789624	10	167,235,69,102,6,105,114,120,114,252,	0,717,3113,4402,7504,9264,18168,25887,26624,27698,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	93700506	93731527	chr8:93700506-93731527	3	+	93700647	93728297	789624	9	167,235,69,102,6,105,114,120,3323,	0,717,3113,4402,7504,9264,18168,25887,27698,
#Partially deleted in new
chr8	93700549	93705552	chr8:93700549-93705552	1	+	93700647	93705067	789624	4	124,235,69,644,	0,674,3070,4359,
#Partially deleted in new
chr8	93700552	93729250	chr8:93700552-93729250	0	+	93700552	93700552	8553170	9	121,1320,69,102,6,105,114,120,1046,	0,671,3067,4356,7458,9218,18122,25841,27652,
#Partially deleted in new
chr8	93700561	93728446	chr8:93700561-93728446	0	+	93700647	93707261	789624	9	112,235,69,102,80,105,114,120,242,	0,662,3058,4347,6640,9209,18113,25832,27643,
#Partially deleted in new
chr8	93700570	93709813	chr8:93700570-93709813	0	+	93700647	93709813	789624	7	103,235,24,69,102,6,43,	0,653,1949,3049,4338,7440,9200,
#Partially deleted in new
chr8	93700581	93728389	chr8:93700581-93728389	1	+	93700647	93728297	789624	8	92,235,69,102,6,105,120,185,	0,642,3038,4327,7429,9189,25812,27623,
#Partially deleted in new
chr8	93700592	93728389	chr8:93700592-93728389	1	+	93700647	93728297	789624	9	81,235,69,97,8,105,114,120,185,	0,631,3027,4316,9167,9178,18082,25801,27612,
#Partially deleted in new
chr8	93700593	93705000	chr8:93700593-93705000	0	+	93700647	93702302	789624	5	80,235,219,69,92,	0,630,1571,3026,4315,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	93700613	93729250	chr8:93700613-93729250	0	+	93700647	93726439	789624	10	60,235,69,102,6,105,114,86,120,1046,	0,610,3006,4295,7397,9157,18061,23896,25780,27591,
#Partially deleted in new
chr8	93700666	93709864	chr8:93700666-93709864	0	+	93700666	93709864	789624	6	57,235,69,102,6,94,	0,557,2953,4242,7344,9104,
#Partially deleted in new
chr8	93700668	93704984	chr8:93700668-93704984	0	+	93701407	93704984	789624	4	389,235,69,76,	0,555,2951,4240,
#Partially deleted in new
chr8	93701533	93705010	chr8:93701533-93705010	0	+	93703679	93705010	789624	4	67,219,69,102,	0,631,2086,3375,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	93705950	93728446	chr8:93705950-93728446	1	+	93709797	93728297	789624	5	246,105,114,120,242,	0,3820,12724,20443,22254,
#Partially deleted in new
chr8	93706064	93728517	chr8:93706064-93728517	0	+	93709797	93728297	789624	5	132,101,114,120,313,	0,3710,12610,20329,22140,
#Partially deleted in new
chr8	93709762	93726704	chr8:93709762-93726704	1	+	93709797	93726546	789624	3	113,114,311,	0,8912,16631,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	93715377	93716113	chr8:93715377-93716113	3	-	93715377	93715377	8553170	1	736,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	93719573	93721167	chr8:93719573-93721167	3	+	93719573	93719573	8553170	2	540,399,	0,1195,
#Partially deleted in new
chr8	93725847	93728337	chr8:93725847-93728337	0	+	93725847	93725847	8553170	3	219,120,133,	0,546,2357,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	93729355	93741017	chr8:93729355-93741017	3	-	93733404	93736410	789624	3	7083,49,137,	0,7951,11525,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	93730263	93741017	chr8:93730263-93741017	1	-	93733404	93736410	789624	4	3925,1890,49,137,	0,4285,7043,10617,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	93730632	93739191	chr8:93730632-93739191	0	-	93730632	93730632	8553170	2	266,241,	0,8318,
#Deleted in new
chr8	93733215	93734022	chr8:93733215-93734022	3	+	93733215	93733215	8553170	2	569,127,	0,680,
#Deleted in new
chr8	93733404	93736410	chr8:93733404-93736410	1	-	93733404	93736410	789624	2	784,1862,	0,1144,
#Partially deleted in new
chr8	93735962	93740718	chr8:93735962-93740718	0	-	93735962	93736410	789624	3	476,49,90,	0,1344,4666,
#Partially deleted in new
chr8	93735980	93741001	chr8:93735980-93741001	0	-	93735980	93736410	789624	2	458,121,	0,4900,
#Partially deleted in new
chr8	93736043	93740956	chr8:93736043-93740956	0	-	93736043	93736410	789624	4	395,49,68,76,	0,1263,4585,4837,
#Partially deleted in new
chr8	93736162	93740989	chr8:93736162-93740989	0	-	93736162	93736410	789624	3	276,49,127,	0,1144,4700,
#Deleted in new
chr8	93740120	93740773	chr8:93740120-93740773	3	+	93740120	93740120	789624	1	653,	0,
#Partially deleted in new
chr8	93754843	93787931	chr8:93754843-93787931	0	+	93755863	93787931	789624	15	66,118,89,94,100,70,75,63,155,109,87,66,157,124,88,	0,176,934,3639,8998,10562,10728,17745,25749,26030,26814,27551,30378,31379,33000,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr8	93754856	93818057	chr8:93754856-93818057	3	+	93754914	93816452	789624	28	281,89,94,100,70,75,63,155,109,87,66,157,124,106,57,99,99,87,100,140,141,81,117,117,105,103,143,1686,	0,921,3626,8985,10549,10715,17732,25736,26017,26801,27538,30365,31366,32987,36406,38341,40552,41044,42277,42474,44761,48747,49905,53983,54200,54928,60448,61515,
#Partially deleted in new
chr8	93754864	93763933	chr8:93754864-93763933	0	+	93763915	93763933	8553170	5	45,118,131,94,92,	0,155,913,3618,8977,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	93754864	93765591	chr8:93754864-93765591	0	+	93763915	93765591	789624	8	45,118,89,90,39,100,70,20,	0,155,913,3622,7120,8977,10541,10707,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr8	93754886	93816760	chr8:93754886-93816760	1	+	93758547	93816452	789624	29	23,118,90,134,100,70,75,63,155,109,87,66,157,124,106,57,99,99,87,100,140,141,81,117,117,105,103,143,389,	0,133,3600,4973,8955,10519,10685,17702,25706,25987,26771,27508,30335,31336,32957,36376,38311,40522,41014,42247,42444,44731,48717,49875,53953,54170,54898,60418,61485,
#Partially deleted in new
chr8	93754894	93787854	chr8:93754894-93787854	0	+	93754914	93787854	789624	5	243,89,94,124,11,	0,883,3588,31328,32949,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr8	93754894	93809971	chr8:93754894-93809971	0	+	93754894	93754894	8553170	17	243,89,94,124,106,57,99,99,87,100,140,141,81,117,117,105,187,	0,883,3588,31328,32949,36368,38303,40514,41006,42239,42436,44723,48709,49867,53945,54162,54890,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	93754905	93759480	chr8:93754905-93759480	0	+	93754905	93754905	8553170	3	232,89,998,	0,872,3577,
#Partially deleted in new
chr8	93754905	93765458	chr8:93754905-93765458	0	+	93754914	93758534	789624	5	232,89,90,100,53,	0,872,3581,8936,10500,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	93754908	93765616	chr8:93754908-93765616	0	+	93754914	93762987	789624	7	229,89,94,116,100,70,45,	0,869,3574,8041,8933,10497,10663,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	93754911	93757130	chr8:93754911-93757130	0	+	93754911	93754911	8553170	2	226,1353,	0,866,
#Partially deleted in new
chr8	93754919	93765581	chr8:93754919-93765581	0	+	93754919	93758526	789624	5	218,94,100,70,10,	0,3563,8922,10486,10652,
#Partially deleted in new
chr8	93754922	93765591	chr8:93754922-93765591	0	+	93754922	93765591	789624	5	215,89,94,100,20,	0,855,3560,8919,10649,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr8	93754926	93819234	chr8:93754926-93819234	0	+	93754944	93816452	789624	29	211,89,94,100,70,75,63,155,109,87,66,157,124,106,57,99,99,87,100,140,141,81,117,117,105,103,143,144,245,	0,851,3556,8915,10479,10645,17662,25666,25947,26731,27468,30295,31296,32917,36336,38271,40482,40974,42207,42404,44691,48677,49835,53913,54130,54858,60378,61445,64063,
#Partially deleted in new
chr8	93765530	93780970	chr8:93765530-93780970	0	+	93765530	93765530	8553170	4	116,63,155,97,	0,7058,15062,15343,
#Partially deleted in new
chr8	93769518	93782450	chr8:93769518-93782450	0	+	93769518	93769518	8553170	6	98,63,155,109,87,56,	0,3070,11074,11355,12139,12876,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	93785221	93785812	chr8:93785221-93785812	0	+	93785221	93785221	8553170	2	157,80,	0,511,
#Partially deleted in new
chr8	93791209	93797403	chr8:93791209-93797403	0	+	93791209	93791209	8553170	6	110,99,99,87,100,73,	0,1988,4199,4691,5924,6121,
#Partially deleted in new
chr8	93794815	93816696	chr8:93794815-93816696	0	+	93794815	93794815	8553170	13	406,99,87,100,140,141,81,117,117,105,103,143,325,	0,593,1085,2318,2515,4802,8788,9946,14024,14241,14969,20489,21556,
#Partially deleted in new
chr8	93811281	93816760	chr8:93811281-93816760	0	+	93811281	93811281	8553170	3	30,143,389,	0,4023,5090,
#Partially deleted in new
chr8	93816407	93818056	chr8:93816407-93818056	0	+	93816407	93816407	8553170	2	108,341,	0,1308,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	93834453	93846743	chr8:93834453-93846743	3	-	93834453	93834453	8553170	2	358,170,	0,12120,
#Deleted in new
chr8	93849560	93850075	chr8:93849560-93850075	7	+	93849560	93849560	16724991	1	515,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	93857806	93921348	chr8:93857806-93921348	0	+	93857806	93857806	8553170	2	388,122,	0,63420,
#Deleted in new
chr8	93915733	93916682	chr8:93915733-93916682	3	-	93915733	93915733	8553170	1	949,	0,
#Deleted in new
chr8	93916021	93916119	chr8:93916021-93916119	3	-	93916021	93916021	5263520	1	98,	0,
#Partially deleted in new
chr8	93916854	93926062	chr8:93916854-93926062	3	+	93922059	93923673	789624	2	225,4047,	0,5161,
#Partially deleted in new
chr8	93916855	93922275	chr8:93916855-93922275	0	+	93922059	93922275	789624	2	81,260,	0,5160,
#Partially deleted in new
chr8	93916933	93924388	chr8:93916933-93924388	1	+	93922059	93923673	789624	3	146,35,2373,	0,977,5082,
#Partially deleted in new
chr8	93916946	93926066	chr8:93916946-93926066	1	+	93917914	93923673	789624	3	272,35,4051,	0,964,5069,
#Partially deleted in new
chr8	93916946	93922289	chr8:93916946-93922289	0	+	93922059	93922289	789624	3	272,35,274,	0,964,5069,
#Partially deleted in new
chr8	93917050	93922443	chr8:93917050-93922443	0	+	93922059	93922443	789624	2	168,428,	0,4965,
#Partially deleted in new
chr8	93917746	93923956	chr8:93917746-93923956	1	+	93922059	93923673	789624	2	199,1941,	0,4269,
#Partially deleted in new
chr8	93918909	93922757	chr8:93918909-93922757	0	+	93922059	93922757	789624	4	234,137,171,742,	0,2317,2792,3106,
#Deleted in new
chr8	93919878	93922500	chr8:93919878-93922500	0	+	93922059	93922500	789624	2	59,485,	0,2137,
#Partially deleted in new
chr8	93939363	93942877	chr8:93939363-93942877	7	-	93939363	93939363	16724991	3	126,254,306,	0,722,3208,
#Deleted in new
chr8	93957337	93957691	chr8:93957337-93957691	7	-	93957337	93957337	16724991	1	354,	0,
#Deleted in new
chr8	93974670	93974776	chr8:93974670-93974776	7	-	93974670	93974670	16724991	1	106,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr8	94127170	94208587	chr8:94127170-94208587	1	-	94128239	94194685	789624	18	1170,114,117,240,131,245,192,77,216,151,132,200,159,139,135,99,71,105,	0,3455,3705,18757,21573,24697,32800,34915,38590,43226,43683,46626,46931,49370,50416,62016,67464,81312,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr8	94127871	94208555	chr8:94127871-94208555	1	-	94128239	94194685	789624	13	469,117,240,131,245,192,77,216,139,135,99,71,73,	0,3004,18056,20872,23996,32099,34214,37889,48669,49715,61315,66763,80611,
#Partially deleted in new
chr8	94128239	94217303	chr8:94128239-94217303	3	-	94128239	94194685	789624	18	101,114,117,240,131,245,192,77,216,151,132,200,159,139,135,99,71,106,	0,2386,2636,17688,20504,23628,31731,33846,37521,42157,42614,45557,45862,48301,49347,60947,66395,88958,
#Partially deleted in new
chr8	94145968	94162128	chr8:94145968-94162128	0	-	94148838	94162128	789624	4	199,131,192,43,	0,2775,14002,16117,
#Partially deleted in new
chr8	94174242	94208555	chr8:94174242-94208555	0	-	94174242	94194685	789624	7	18,139,135,99,71,102,73,	0,2298,3344,14944,20392,22987,34240,
#Partially deleted in new
chr8	94201912	94203052	chr8:94201912-94203052	7	-	94201912	94201912	16724991	2	253,580,	0,560,
#Partially deleted in new
chr8	94249252	94262350	chr8:94249252-94262350	3	-	94250309	94260503	0	5	1335,205,77,340,146,	0,2766,3783,10920,12952,
#Partially deleted in new
chr8	94249257	94262345	chr8:94249257-94262345	1	-	94250309	94260503	0	5	1330,205,77,340,256,	0,2761,3778,10915,12832,
#Partially deleted in new
chr8	94259815	94262345	chr8:94259815-94262345	0	-	94259815	94259815	8553170	2	697,141,	0,2389,
#Partially deleted in new
chr8	94260002	94262319	chr8:94260002-94262319	0	-	94260002	94260002	8553170	2	510,230,	0,2087,
#Deleted in new
chr8	94260222	94260770	chr8:94260222-94260770	0	-	94260222	94260503	789624	2	290,73,	0,475,
#Deleted in new
chr8	94352922	94353653	chr8:94352922-94353653	7	+	94352922	94352922	16724991	1	731,	0,
#Partially deleted in new
chr8	94371959	94475109	chr8:94371959-94475109	3	-	94372169	94467539	789624	15	428,201,67,262,176,291,140,208,226,163,282,195,169,151,109,	0,6220,6608,8185,15024,19649,21783,27454,28278,32117,35479,39161,86308,95445,103041,
#Deleted in new
chr8	94371960	94373090	chr8:94371960-94373090	0	-	94371960	94371960	8553170	2	427,79,	0,1051,
#Partially deleted in new
chr8	94372169	94407667	chr8:94372169-94407667	3	-	94372169	94407667	789624	11	218,201,67,262,176,291,140,208,226,163,229,	0,6010,6398,7975,14814,19439,21573,27244,28068,31907,35269,
#Partially deleted in new
chr8	94378376	94436952	chr8:94378376-94436952	0	-	94411299	94436868	789624	12	4,67,262,176,291,140,208,226,163,282,195,458,	0,191,1768,8607,13232,15366,21037,21861,25700,29062,32744,58118,
#Partially deleted in new
chr8	94380269	94387429	chr8:94380269-94387429	0	-	94380269	94380269	8553170	2	137,446,	0,6714,
#Partially deleted in new
chr8	94391806	94475082	chr8:94391806-94475082	0	-	94411299	94467539	789624	11	93,140,152,226,163,282,195,46,169,151,82,	0,1936,7607,8431,12270,15632,19314,40804,66461,75598,83194,
#Partially deleted in new
chr8	94393422	94399583	chr8:94393422-94399583	0	-	94393422	94393422	8553170	2	460,170,	0,5991,
#Partially deleted in new
chr8	94407521	94475054	chr8:94407521-94475054	0	-	94411291	94467539	789624	4	199,195,151,54,	0,3599,59883,67479,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	94427711	94429888	chr8:94427711-94429888	3	-	94427711	94427711	8553170	1	2177,	0,
#Partially deleted in new
chr8	94431159	94475062	chr8:94431159-94475062	1	-	94432606	94467539	789624	4	1497,169,151,62,	0,27108,36245,43841,
#Deleted in new
chr8	94431946	94436942	chr8:94431946-94436942	1	-	94432130	94436868	789624	2	710,448,	0,4548,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr8	94487692	94553523	chr8:94487692-94553523	3	-	94488705	94553447	789624	24	1168,144,332,167,97,161,153,133,218,253,236,545,94,83,155,492,1141,273,123,169,49,87,116,139,	0,2246,3885,4959,7167,8038,8635,11681,18807,21995,22724,23492,24303,27176,30095,31292,38530,41377,43270,47146,49410,50567,56134,65692,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	94488519	94512455	chr8:94488519-94512455	0	-	94488519	94488519	8553170	10	341,144,332,167,3776,218,253,236,545,460,	0,1419,3058,4132,7211,17980,21168,21897,22665,23476,
#Partially deleted in new
chr8	94488519	94526302	chr8:94488519-94526302	0	-	94496443	94526302	789624	15	341,144,167,97,161,153,218,253,236,545,94,83,155,492,80,	0,1419,4132,6340,7211,7808,17980,21168,21897,22665,23476,26349,29268,30465,37703,
#Partially deleted in new
chr8	94488520	94490172	chr8:94488520-94490172	0	-	94488520	94488520	8553170	2	340,234,	0,1418,
#Partially deleted in new
chr8	94488614	94492758	chr8:94488614-94492758	0	-	94490006	94492758	789624	3	246,144,107,	0,1324,4037,
#Partially deleted in new
chr8	94491737	94496436	chr8:94491737-94496436	0	-	94492814	94496436	789624	4	172,167,161,109,	0,914,3993,4590,
#Partially deleted in new
chr8	94509756	94511562	chr8:94509756-94511562	0	-	94509756	94509756	8553170	2	184,378,	0,1428,
#Partially deleted in new
chr8	94510732	94553529	chr8:94510732-94553529	1	-	94511130	94553447	789624	13	997,94,83,155,492,1141,273,123,169,49,87,116,145,	0,1263,4136,7055,8252,15490,18337,20230,24106,26370,27527,33094,42652,
#Partially deleted in new
chr8	94529216	94543901	chr8:94529216-94543901	0	-	94529216	94529216	8553170	5	126,123,49,87,75,	0,1746,7886,9043,14610,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	94533627	94534391	chr8:94533627-94534391	3	+	94533627	94533627	8553170	2	37,454,	0,310,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	94553721	94569745	chr8:94553721-94569745	3	+	94553721	94553721	8553170	2	186,1603,	0,14421,
#Partially deleted in new
chr8	94565035	94565715	chr8:94565035-94565715	7	+	94565035	94565035	16724991	2	130,245,	0,435,
#Deleted in new
chr8	94590114	94590259	chr8:94590114-94590259	7	+	94590114	94590114	16724991	1	145,	0,
#Deleted in new
chr8	94594410	94594601	chr8:94594410-94594601	7	+	94594410	94594410	16724991	1	191,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	94637284	94639467	chr8:94637284-94639467	3	-	94637284	94637284	789624	1	2183,	0,
#Partially deleted in new
chr8	94641073	94707466	chr8:94641073-94707466	1	+	94641318	94705945	0	15	377,129,114,115,99,55,111,133,43,302,219,187,169,151,1542,	0,882,2229,5094,21198,21427,23623,23853,24080,26875,30379,33234,37129,51603,64851,
#Partially deleted in new
chr8	94641135	94707466	chr8:94641135-94707466	3	+	94641318	94696926	0	16	315,129,114,115,99,55,111,133,43,302,219,199,169,151,110,1542,	0,820,2167,5032,21136,21365,23561,23791,24018,26813,30317,33172,37067,51541,55716,64789,
#Partially deleted in new
chr8	94641159	94707466	chr8:94641159-94707466	1	+	94641318	94696926	0	16	291,129,114,115,99,55,111,133,43,302,219,199,169,151,110,1542,	0,796,2143,5008,21112,21341,23537,23767,23994,26789,30293,33148,37043,51517,55692,64765,
#Partially deleted in new
chr8	94641173	94707466	chr8:94641173-94707466	1	+	94641318	94696926	0	16	277,129,114,115,99,55,111,133,43,302,219,187,169,151,110,1542,	0,782,2129,4994,21098,21327,23523,23753,23980,26775,30279,33134,37029,51503,55678,64751,
#Partially deleted in new
chr8	94641198	94707258	chr8:94641198-94707258	1	+	94641318	94705931	0	14	252,129,114,115,99,55,111,133,43,302,219,199,169,1334,	0,757,2104,4969,21073,21302,23498,23728,23955,26750,30254,33109,37004,64726,
#Partially deleted in new
chr8	94641203	94707466	chr8:94641203-94707466	1	+	94641318	94705931	789624	14	247,129,114,115,99,55,111,133,43,302,219,187,169,1542,	0,752,2099,4964,21068,21297,23493,23723,23950,26745,30249,33104,36999,64721,
#Partially deleted in new
chr8	94641611	94662333	chr8:94641611-94662333	0	+	94641611	94641611	8553170	4	473,114,115,62,	0,1691,4556,20660,
#Partially deleted in new
chr8	94643299	94646452	chr8:94643299-94646452	0	+	94643299	94643299	8553170	2	117,285,	0,2868,
#Partially deleted in new
chr8	94646196	94707466	chr8:94646196-94707466	0	+	94646196	94696942	789624	12	86,99,55,111,133,43,302,219,199,169,110,1542,	0,16075,16304,18500,18730,18957,21752,25256,28111,32006,50655,59728,
#Partially deleted in new
chr8	94646215	94706515	chr8:94646215-94706515	0	+	94646215	94705945	789624	12	67,99,55,111,133,43,302,219,199,169,151,591,	0,16056,16285,18481,18711,18938,21733,25237,28092,31987,46461,59709,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	94655910	94656208	chr8:94655910-94656208	3	+	94655910	94655910	8553170	1	298,	0,
#Partially deleted in new
chr8	94665156	94668365	chr8:94665156-94668365	0	+	94665156	94665156	8553170	2	40,417,	0,2792,
#Partially deleted in new
chr8	94688227	94688610	chr8:94688227-94688610	7	+	94688227	94688227	16724991	1	383,	0,
#Deleted in new
chr8	94705653	94707466	chr8:94705653-94707466	0	+	94705653	94705653	8553170	1	1813,	0,
#Deleted in new
chr8	94708951	94709244	chr8:94708951-94709244	7	-	94708951	94708951	16724991	1	293,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	94713714	94713812	chr8:94713714-94713812	3	-	94713714	94713714	8553170	1	98,	0,
#Partially deleted in new
chr8	94719702	94739779	chr8:94719702-94739779	0	+	94719998	94739779	789624	4	312,111,122,135,	0,6628,19710,19942,
#Partially deleted in new
chr8	94719874	94739761	chr8:94719874-94739761	0	+	94719998	94738376	789624	5	140,111,91,122,117,	0,6456,18494,19538,19770,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr8	94719899	94793836	chr8:94719899-94793836	3	+	94719998	94789910	789624	19	115,111,125,91,122,146,124,135,132,99,74,159,120,121,57,83,133,159,4091,	0,6431,14730,18469,19513,19745,36136,41800,45283,45811,46712,48495,50552,57766,60459,61184,63770,67994,69846,
#Partially deleted in new
chr8	94726395	94739725	chr8:94726395-94739725	0	+	94726395	94739725	789624	4	46,91,122,81,	0,11973,13017,13249,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	94726401	94745084	chr8:94726401-94745084	0	+	94726401	94744533	789624	6	40,125,91,122,146,600,	0,8228,11967,13011,13243,18083,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	94739519	94744983	chr8:94739519-94744983	0	+	94739519	94744385	789624	3	15,146,641,	0,125,4823,
#Partially deleted in new
chr8	94739649	94770547	chr8:94739649-94770547	0	+	94739649	94770547	789624	7	141,124,135,99,74,159,96,	0,16386,22050,26061,26962,28745,30802,
#Partially deleted in new
chr8	94777677	94789835	chr8:94777677-94789835	0	+	94777677	94783729	789624	5	109,57,133,159,90,	0,2681,5992,10216,12068,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	94791642	94792963	chr8:94791642-94792963	3	-	94791642	94791642	8553170	2	635,161,	0,1160,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	94792231	94793106	chr8:94792231-94793106	1	-	94792231	94792231	8553170	2	126,376,	0,499,
#Partially deleted in new
chr8	94813310	94832158	chr8:94813310-94832158	0	+	94813431	94832158	789624	6	128,175,141,72,52,167,	0,11582,13952,14411,15664,18681,
#Partially deleted in new
chr8	94822850	94827353	chr8:94822850-94827353	0	+	94822859	94827353	789624	3	331,175,91,	0,2042,4412,
#Partially deleted in new
chr8	94823209	94832007	chr8:94823209-94832007	0	+	94823209	94832007	789624	6	92,175,141,72,52,16,	0,1683,4053,4512,5765,8782,
#Partially deleted in new
chr8	94823289	94832001	chr8:94823289-94832001	0	+	94823431	94832001	789624	5	272,175,72,52,10,	0,1603,4432,5685,8702,
#Partially deleted in new
chr8	94823297	94832031	chr8:94823297-94832031	0	+	94827284	94832031	789624	5	264,141,72,52,40,	0,3965,4424,5677,8694,
#Partially deleted in new
chr8	94823298	94881746	chr8:94823298-94881746	3	+	94823431	94880234	789624	27	263,175,141,72,52,183,108,156,101,142,71,176,134,111,202,122,185,34,57,62,119,104,51,74,65,44,1629,	0,1594,3964,4423,5676,8693,13225,15164,18192,19048,26163,26617,28254,30506,33478,36212,42207,42859,43841,43977,48585,50075,51253,52775,52922,53147,56819,
#Partially deleted in new
chr8	94823298	94880327	chr8:94823298-94880327	0	+	94823431	94838508	789624	26	263,175,141,72,52,183,108,125,101,142,71,176,134,111,202,122,195,34,198,119,104,51,74,65,44,210,	0,1594,3964,4423,5676,8693,13225,15195,18192,19048,26163,26617,28254,30506,33478,36212,42207,42859,43841,48585,50075,51253,52775,52922,53147,56819,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr8	94823306	94860347	chr8:94823306-94860347	0	+	94823306	94823306	8553170	16	255,175,141,72,52,183,108,156,101,142,71,176,134,111,202,837,	0,1586,3956,4415,5668,8685,13217,15156,18184,19040,26155,26609,28246,30498,33470,36204,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr8	94823375	94880450	chr8:94823375-94880450	0	+	94823431	94866163	789624	29	186,175,141,72,52,183,108,156,101,142,71,176,134,111,202,122,195,34,42,57,62,122,119,104,51,74,65,44,333,	0,1517,3887,4346,5599,8616,13148,15087,18115,18971,26086,26540,28177,30429,33401,36135,42130,42782,42936,43764,43900,45316,48508,49998,51176,52698,52845,53070,56742,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr8	94823375	94880450	chr8:94823375-94880450	0	+	94823431	94838508	789624	28	186,175,141,72,52,183,108,125,101,142,71,176,134,111,202,122,185,34,57,62,122,119,104,51,74,65,44,333,	0,1517,3887,4346,5599,8616,13148,15118,18115,18971,26086,26540,28177,30429,33401,36135,42130,42782,43764,43900,45316,48508,49998,51176,52698,52845,53070,56742,
#Partially deleted in new
chr8	94828991	94880314	chr8:94828991-94880314	0	+	94828991	94880234	789624	22	35,183,108,156,101,142,71,176,134,111,202,122,185,34,57,62,119,104,74,65,44,197,	0,3000,7532,9471,12499,13355,20470,20924,22561,24813,27785,30519,36514,37166,38148,38284,42892,44382,47082,47229,47454,51126,
#Partially deleted in new
chr8	94853793	94867326	chr8:94853793-94867326	0	+	94853793	94853793	8553170	5	122,202,122,57,51,	0,2983,5717,13346,13482,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	94856962	94867308	chr8:94856962-94867308	0	+	94856962	94866350	789624	7	16,122,185,34,40,57,33,	0,2548,8543,9195,9349,10177,10313,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	94864692	94871887	chr8:94864692-94871887	0	+	94864692	94864692	8553170	6	52,185,34,57,62,4,	0,813,1465,2447,2583,7191,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	94865619	94866351	chr8:94865619-94866351	0	+	94865619	94865619	8553170	2	71,194,	0,538,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	94866736	94874585	chr8:94866736-94874585	0	+	94866736	94866736	8553170	6	460,62,122,119,104,34,	0,539,1955,5147,6637,7815,
#Partially deleted in new
chr8	94867030	94876142	chr8:94867030-94876142	0	+	94867030	94867030	8553170	6	166,62,119,104,51,69,	0,245,4853,6343,7521,9043,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	94867172	94867840	chr8:94867172-94867840	0	+	94867172	94867172	8553170	2	24,565,	0,103,
#Partially deleted in new
chr8	94867327	94873752	chr8:94867327-94873752	0	+	94867327	94867327	8553170	3	10,119,379,	0,4556,6046,
#Deleted in new
chr8	94875950	94876646	chr8:94875950-94876646	0	+	94875950	94875950	8553170	2	335,201,	0,495,
#Partially deleted in new
chr8	94879769	94896678	chr8:94879769-94896678	3	-	94881631	94894221	789624	12	1976,158,112,135,96,147,136,152,54,97,40,227,	0,2362,3011,5297,5693,8157,10645,13048,14121,14253,14438,16682,
#Partially deleted in new
chr8	94880226	94895254	chr8:94880226-94895254	1	-	94881631	94894221	789624	12	1519,158,112,135,96,147,136,152,54,97,40,78,	0,1905,2554,4840,5236,7700,10188,12591,13664,13796,13981,14950,
#Partially deleted in new
chr8	94881613	94895254	chr8:94881613-94895254	1	-	94881745	94894221	789624	12	156,158,112,135,96,147,136,152,54,97,40,78,	0,518,1167,3453,3849,6313,8801,11204,12277,12409,12594,13563,
#Partially deleted in new
chr8	94883718	94890458	chr8:94883718-94890458	0	-	94883885	94890458	789624	5	203,135,96,147,44,	0,1348,1744,4208,6696,
#Deleted in new
chr8	94884608	94885070	chr8:94884608-94885070	3	+	94884608	94884608	8553170	1	462,	0,
#Partially deleted in new
chr8	94885451	94893590	chr8:94885451-94893590	0	-	94885451	94885451	8553170	5	107,147,136,152,84,	0,2475,4963,7366,8055,
#Partially deleted in new
chr8	94885462	94895198	chr8:94885462-94895198	0	-	94890487	94894221	789624	7	96,147,136,54,97,40,22,	0,2464,4952,8428,8560,8745,9714,
#Partially deleted in new
chr8	94890512	94895201	chr8:94890512-94895201	0	-	94893897	94894221	789624	6	38,152,82,97,40,25,	0,2305,3378,3510,3695,4664,
#Partially deleted in new
chr8	94891238	94892107	chr8:94891238-94892107	7	+	94891238	94891238	16724991	2	138,420,	0,449,
#Deleted in new
chr8	94893654	94894650	chr8:94893654-94894650	0	-	94893654	94893654	8553170	3	290,97,443,	0,368,553,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	94895766	95047090	chr8:94895766-95047090	0	+	95032077	95047090	789624	8	161,185,119,104,123,57,103,97,	0,62228,85088,136228,139687,145803,149778,151227,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr8	94895812	95058710	chr8:94895812-95058710	1	+	95032077	95057937	789624	15	115,137,185,98,167,115,150,104,123,57,103,134,102,57,902,	0,49670,62182,79505,80004,85046,127357,136182,139641,145757,149732,151181,152644,156361,161996,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	94895836	95047031	chr8:94895836-95047031	0	+	95035489	95047031	789624	8	91,185,104,115,123,57,103,38,	0,62158,136158,138171,139617,145733,149708,151157,
#Partially deleted in new
chr8	94925971	94949411	chr8:94925971-94949411	3	-	94930478	94940941	789624	4	4757,361,262,258,	0,13888,14858,23182,
#Partially deleted in new
chr8	94925971	94949366	chr8:94925971-94949366	1	-	94932085	94940941	789624	5	4757,38,361,262,213,	0,6098,13888,14858,23182,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	94950224	94951396	chr8:94950224-94951396	2	+	94950224	94950224	8553170	3	135,39,275,	0,546,897,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	94958007	95058710	chr8:94958007-95058710	1	+	95032077	95057937	789624	10	172,115,104,123,57,103,134,102,57,902,	0,22851,73987,77446,83562,87537,88986,90449,94166,99801,
#Deleted in new
chr8	94974572	94974853	chr8:94974572-94974853	7	-	94974572	94974572	16724991	1	281,	0,
#Partially deleted in new
chr8	94974607	94984184	chr8:94974607-94984184	0	+	94974607	94974607	8553170	4	86,98,119,150,	0,710,6247,9427,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	94980907	94989348	chr8:94980907-94989348	0	+	94980907	94980907	8553170	2	66,991,	0,7450,
#Partially deleted in new
chr8	95024985	95058710	chr8:95024985-95058710	3	+	95025008	95057937	789624	9	220,100,123,57,103,134,102,57,902,	0,7009,10468,16584,20559,22008,23471,27188,32823,
#Partially deleted in new
chr8	95024993	95057952	chr8:95024993-95057952	0	+	95025008	95034072	789624	11	212,104,115,123,222,57,103,134,102,57,144,	0,7001,9014,10460,15712,16576,20551,22000,23463,27180,32815,
#Partially deleted in new
chr8	95025005	95047087	chr8:95025005-95047087	0	+	95025008	95034072	789624	7	200,104,115,123,57,103,94,	0,6989,9002,10448,16564,20539,21988,
#Partially deleted in new
chr8	95025020	95057946	chr8:95025020-95057946	0	+	95025020	95035458	789624	10	185,104,123,193,57,103,134,102,57,138,	0,6974,10433,11281,16549,20524,21973,23436,27153,32788,
#Partially deleted in new
chr8	95025065	95036401	chr8:95025065-95036401	0	+	95025065	95034072	789624	5	140,104,115,123,100,	0,6929,8942,10388,11236,
#Partially deleted in new
chr8	95025067	95057936	chr8:95025067-95057936	0	+	95025067	95035458	789624	9	138,104,123,57,103,134,102,57,128,	0,6927,10386,16502,20477,21926,23389,27106,32741,
#Partially deleted in new
chr8	95025067	95076168	chr8:95025067-95076168	0	+	95025067	95036436	789624	10	138,100,123,124,57,103,134,102,57,536,	0,6927,10386,11303,16502,20477,21926,23389,27106,50565,
#Partially deleted in new
chr8	95034648	95047054	chr8:95034648-95047054	0	+	95035489	95047054	789624	5	75,123,57,103,61,	0,805,6921,10896,12345,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	95048465	95116455	chr8:95048465-95116455	0	+	95048465	95048465	8553170	6	93,120,95,36,202,186,	0,27167,52666,54510,67070,67804,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	95055213	95055320	chr8:95055213-95055320	3	+	95055213	95055213	8553170	1	107,	0,
#Partially deleted in new
chr8	95066807	95072920	chr8:95066807-95072920	3	-	95066807	95066807	789624	2	2428,204,	0,5909,
#Partially deleted in new
chr8	95068923	95073182	chr8:95068923-95073182	0	-	95068923	95068923	8553170	2	312,254,	0,4005,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	95071731	95087924	chr8:95071731-95087924	3	-	95071731	95071731	8553170	4	287,124,104,279,	0,6789,13831,15914,
#Deleted in new
chr8	95072910	95072996	chr8:95072910-95072996	3	-	95072910	95072910	5263520	1	86,	0,
#Deleted in new
chr8	95072913	95072993	chr8:95072913-95072993	3	+	95072913	95072913	5263520	1	80,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	95100393	95103457	chr8:95100393-95103457	0	+	95100393	95100393	8553170	3	135,95,482,	0,738,2582,
#Partially deleted in new
chr8	95133803	95156684	chr8:95133803-95156684	3	+	95154044	95154794	789624	2	227,2654,	0,20227,
#Partially deleted in new
chr8	95134075	95154918	chr8:95134075-95154918	1	+	95154044	95154794	789624	2	256,888,	0,19955,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	95204455	95432666	chr8:95204455-95432666	1	+	95204455	95204455	8553170	3	468,53,41,	0,804,228170,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	95207006	95216374	chr8:95207006-95216374	3	-	95207006	95207006	789624	3	302,160,57,	0,1412,9311,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	95244918	95269201	chr8:95244918-95269201	3	-	95247616	95269189	789624	6	2852,96,66,65,88,167,	0,7269,14921,15549,18768,24116,
#Partially deleted in new
chr8	95268835	95653710	chr8:95268835-95653710	1	+	95268835	95268835	8553170	5	55,71,155,39,297,	0,32286,163790,341828,384578,
#Deleted in new
chr8	95403801	95403894	chr8:95403801-95403894	7	+	95403801	95403801	16724991	1	93,	0,
#Partially deleted in new
chr8	95432636	95810136	chr8:95432636-95810136	3	+	95432636	95432636	789624	4	144,34,160,118,	0,178027,367859,377382,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	95505405	95527524	chr8:95505405-95527524	3	+	95505405	95505405	8553170	5	220,48,112,116,1629,	0,1054,19001,19438,20490,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	95599113	95599219	chr8:95599113-95599219	3	+	95599113	95599113	8553170	1	106,	0,
#Deleted in new
chr8	95947780	95948233	chr8:95947780-95948233	7	-	95947780	95947780	16724991	1	453,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	95986107	95993103	chr8:95986107-95993103	3	-	95986107	95986107	8553170	2	832,109,	0,6887,
#Deleted in new
chr8	96068728	96069681	chr8:96068728-96069681	7	-	96068728	96068728	16724991	1	953,	0,
#Deleted in new
chr8	96126966	96127801	chr8:96126966-96127801	7	-	96126966	96126966	16724991	1	835,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	96140571	96140944	chr8:96140571-96140944	3	-	96140571	96140571	8553170	1	373,	0,
#Partially deleted in new
chr8	96142329	96160792	chr8:96142329-96160792	3	-	96144562	96160692	789624	2	3195,506,	0,17957,
#Partially deleted in new
chr8	96144524	96160719	chr8:96144524-96160719	1	-	96144654	96160692	789624	4	153,87,300,433,	0,551,700,15762,
#Partially deleted in new
chr8	96144524	96160716	chr8:96144524-96160716	1	-	96144617	96160692	789624	3	281,468,430,	0,532,15762,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	96225919	96235634	chr8:96225919-96235634	3	-	96231054	96235530	0	4	5213,167,72,123,	0,5854,7236,9592,
#Partially deleted in new
chr8	96230476	96235543	chr8:96230476-96235543	0	-	96234474	96235530	789624	5	656,167,72,114,32,	0,1297,2679,3946,5035,
#Partially deleted in new
chr8	96230714	96235546	chr8:96230714-96235546	0	-	96231287	96235530	789624	5	418,290,167,72,35,	0,511,1059,2441,4797,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	96230935	96235544	chr8:96230935-96235544	0	-	96230935	96230935	8553170	2	197,3771,	0,838,
#Partially deleted in new
chr8	96230938	96233219	chr8:96230938-96233219	1	-	96231552	96231935	789624	4	194,90,167,64,	0,593,835,2217,
#Partially deleted in new
chr8	96230941	96235539	chr8:96230941-96235539	1	-	96231104	96235530	0	5	191,137,167,72,28,	0,437,832,2214,4570,
#Partially deleted in new
chr8	96231062	96233915	chr8:96231062-96233915	0	-	96231062	96231062	8553170	3	70,167,760,	0,711,2093,
#Partially deleted in new
chr8	96231094	96235546	chr8:96231094-96235546	1	-	96231287	96235530	789624	4	421,167,72,35,	0,679,2061,4417,
#Partially deleted in new
chr8	96231296	96235545	chr8:96231296-96235545	0	-	96231296	96231296	8553170	3	644,72,34,	0,1859,4215,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	96235426	96238034	chr8:96235426-96238034	3	+	96235426	96235426	8553170	3	135,119,128,	0,2030,2480,
#Partially deleted in new
chr8	96239397	96261610	chr8:96239397-96261610	1	-	96239828	96258690	789624	9	288,62,162,72,148,190,153,344,110,	0,396,4521,6462,6909,11508,17564,18959,22103,
#Partially deleted in new
chr8	96239423	96257275	chr8:96239423-96257275	1	-	96239490	96257085	0	6	262,162,72,148,190,314,	0,4495,6436,6883,11482,17538,
#Partially deleted in new
chr8	96239428	96257070	chr8:96239428-96257070	1	-	96239490	96251012	789624	5	257,72,148,190,109,	0,6431,6878,11477,17533,
#Partially deleted in new
chr8	96239434	96261589	chr8:96239434-96261589	3	-	96239490	96258690	0	8	251,162,72,148,190,153,344,89,	0,4484,6425,6872,11471,17527,18922,22066,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	96258487	96261588	chr8:96258487-96261588	0	-	96258487	96258690	789624	3	213,111,88,	0,1649,3013,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr8	96261714	96336995	chr8:96261714-96336995	3	+	96262040	96333566	789624	13	505,92,45,125,159,152,142,113,66,100,69,70,3539,	0,11584,22394,25307,33383,37979,42325,44729,47842,58531,68498,69311,71742,
#Partially deleted in new
chr8	96261912	96334552	chr8:96261912-96334552	0	+	96262040	96295153	789624	11	307,92,159,152,142,113,66,100,69,70,1096,	0,11386,33185,37781,42127,44531,47644,58333,68300,69113,71544,
#Partially deleted in new
chr8	96261966	96287388	chr8:96261966-96287388	0	+	96261966	96261966	8553170	4	253,92,45,367,	0,11332,22142,25055,
#Partially deleted in new
chr8	96283596	96304157	chr8:96283596-96304157	0	+	96283596	96283596	8553170	6	167,45,125,159,152,118,	0,512,3425,11501,16097,20443,
#Partially deleted in new
chr8	96295191	96333982	chr8:96295191-96333982	1	+	96299702	96333850	789624	10	65,152,142,113,66,100,69,70,30,305,	0,4502,8848,11252,14365,25054,35021,35834,38265,38486,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	96309220	96309322	chr8:96309220-96309322	3	-	96309220	96309220	8553170	1	102,	0,
#Partially deleted in new
chr8	96330316	96333892	chr8:96330316-96333892	0	+	96330316	96330316	8553170	2	779,436,	0,3140,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	96371864	96386648	chr8:96371864-96386648	1	-	96371864	96371864	789624	3	366,78,267,	0,14108,14517,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	96372091	96387438	chr8:96372091-96387438	3	-	96372091	96372091	789624	3	139,78,335,	0,13881,15012,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	96431053	96431160	chr8:96431053-96431160	3	-	96431053	96431053	8553170	1	107,	0,
#Partially deleted in new
chr8	96493350	96611780	chr8:96493350-96611780	3	+	96494271	96609548	789624	5	981,112,134,136,2396,	0,100129,109044,114984,116034,
#Partially deleted in new
chr8	96493812	96610174	chr8:96493812-96610174	1	+	96494271	96609548	789624	4	523,134,136,790,	0,108582,114522,115572,
#Partially deleted in new
chr8	96493812	96538816	chr8:96493812-96538816	0	+	96493812	96493812	8553170	4	231,79,126,121,	0,35380,43487,44883,
#Partially deleted in new
chr8	96493812	96537343	chr8:96493812-96537343	0	+	96493812	96493812	8553170	2	519,44,	0,43487,
#Partially deleted in new
chr8	96494007	96609643	chr8:96494007-96609643	1	+	96593506	96609548	789624	5	36,112,134,136,259,	0,99472,108387,114327,115377,
#Partially deleted in new
chr8	96580348	96610100	chr8:96580348-96610100	1	+	96593506	96609548	789624	5	220,112,134,136,716,	0,13131,22046,27986,29036,
#Partially deleted in new
chr8	96584944	96609440	chr8:96584944-96609440	0	+	96593506	96609440	789624	5	69,112,134,136,56,	0,8535,17450,23390,24440,
#Partially deleted in new
chr8	96586386	96609465	chr8:96586386-96609465	0	+	96593506	96609465	789624	5	158,112,134,136,81,	0,7093,16008,21948,22998,
#Partially deleted in new
chr8	96645226	97143501	chr8:96645226-97143501	3	+	96784897	97143183	789624	8	176,467,208,208,112,92,202,482,	0,139637,189746,234571,320708,384176,420782,497793,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	96645370	96785292	chr8:96645370-96785292	0	+	96784897	96785292	789624	3	32,105,429,	0,35072,139493,
#Partially deleted in new
chr8	96645374	96835097	chr8:96645374-96835097	0	+	96784897	96835097	789624	4	28,40,467,125,	0,13909,139489,189598,
#Partially deleted in new
chr8	96732291	96785328	chr8:96732291-96785328	0	+	96732291	96732291	8553170	2	103,465,	0,52572,
#Partially deleted in new
chr8	96760973	96785310	chr8:96760973-96785310	0	+	96784897	96785310	789624	2	106,447,	0,23890,
#Partially deleted in new
chr8	96761239	96785287	chr8:96761239-96785287	0	+	96784897	96785287	789624	2	253,424,	0,23624,
#Partially deleted in new
chr8	97029468	97149654	chr8:97029468-97149654	0	+	97029468	97143183	789624	4	26,202,169,69,	0,36540,113551,120117,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	97055526	97092936	chr8:97055526-97092936	0	+	97055526	97055526	8553170	3	119,202,575,	0,10482,36835,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	97055526	97092710	chr8:97055526-97092710	0	+	97055526	97055526	8553170	4	119,140,202,349,	0,879,10482,36835,
#Deleted in new
chr8	97132834	97133379	chr8:97132834-97133379	3	-	97132834	97132834	8553170	1	545,	0,
#Deleted in new
chr8	97144169	97144723	chr8:97144169-97144723	3	+	97144169	97144169	8553170	1	554,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	97241741	97242204	chr8:97241741-97242204	3	-	97241741	97241741	8553170	1	463,	0,
#Deleted in new
chr8	97273473	97277964	chr8:97273473-97277964	3	-	97276590	97277844	789624	1	4491,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	97358264	97358478	chr8:97358264-97358478	3	+	97358264	97358264	5263520	1	214,	0,
#Deleted in new
chr8	97624202	97625079	chr8:97624202-97625079	7	-	97624202	97624202	16724991	1	877,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	97644178	97728770	chr8:97644178-97728770	3	+	97644506	97724670	0	12	709,102,85,177,66,237,99,125,108,141,157,4171,	0,16893,42489,43250,44859,46773,55575,62447,69483,74870,78700,80421,
#Partially deleted in new
chr8	97644545	97725243	chr8:97644545-97725243	1	+	97644575	97724670	789624	11	342,102,85,177,66,237,125,108,141,157,644,	0,16526,42122,42883,44492,46406,62080,69116,74503,78333,80054,
#Partially deleted in new
chr8	97644792	97691164	chr8:97644792-97691164	0	+	97644792	97691164	789624	5	95,102,85,177,213,	0,16279,41875,42636,46159,
#Partially deleted in new
chr8	97691018	97724652	chr8:97691018-97724652	0	+	97691018	97713672	789624	5	170,108,141,157,53,	0,22643,28030,31860,33581,
#Partially deleted in new
chr8	97691130	97724617	chr8:97691130-97724617	0	+	97691130	97724617	789624	6	58,99,125,108,157,18,	0,8623,15495,22531,31748,33469,
#Partially deleted in new
chr8	97706411	97719087	chr8:97706411-97719087	0	+	97706411	97706411	8553170	3	339,108,39,	0,7250,12637,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	97772312	97772425	chr8:97772312-97772425	3	+	97772312	97772312	8553170	1	113,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	97775056	97853013	chr8:97775056-97853013	1	+	97775736	97851474	789624	7	1052,112,74,123,99,96,1617,	0,30296,40271,41001,44083,50001,76340,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	97775056	97852598	chr8:97775056-97852598	1	+	97775736	97851474	789624	7	1052,112,74,123,99,96,1202,	0,30296,40271,41001,44083,50001,76340,
#Partially deleted in new
chr8	97775775	97851474	chr8:97775775-97851474	3	+	97776009	97851474	789624	7	333,112,74,123,99,96,78,	0,29577,39552,40282,43364,49282,75621,
#Partially deleted in new
chr8	97775848	97819164	chr8:97775848-97819164	0	+	97776009	97819164	789624	5	260,112,98,123,25,	0,29504,39455,40209,43291,
#Partially deleted in new
chr8	97788209	97788357	chr8:97788209-97788357	7	-	97788209	97788209	16724991	1	148,	0,
#Deleted in new
chr8	97853020	97853253	chr8:97853020-97853253	7	-	97853020	97853020	16724991	1	233,	0,
#Partially deleted in new
chr8	97858048	97858947	chr8:97858048-97858947	7	-	97858048	97858048	16724991	4	84,93,39,36,	0,91,497,863,
#Deleted in new
chr8	97865053	97865485	chr8:97865053-97865485	7	+	97865053	97865053	16724991	1	432,	0,
#Partially deleted in new
chr8	97868839	98035978	chr8:97868839-98035978	1	+	97888100	98035712	789624	19	448,168,570,123,123,123,123,123,123,123,123,123,123,414,153,72,78,99,322,	0,19235,62113,72937,92568,110046,125640,134821,138265,138639,147700,149154,152365,158576,161622,163406,164259,164721,166817,
#Partially deleted in new
chr8	97869082	98036716	chr8:97869082-98036716	3	+	97888100	98035712	789624	19	205,168,570,123,123,123,123,123,123,123,123,123,123,414,153,72,135,99,1060,	0,18992,61870,72694,92325,109803,125397,134578,138022,138396,147457,148911,152122,158333,161379,163163,163959,164478,166574,
#Partially deleted in new
chr8	97869110	98036210	chr8:97869110-98036210	1	+	97888100	98035712	789624	18	177,168,570,123,123,123,123,123,123,123,123,123,414,153,72,135,99,554,	0,18964,61842,72666,92297,109775,134550,137994,138368,147429,148883,152094,158305,161351,163135,163931,164450,166546,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	97869112	98004286	chr8:97869112-98004286	0	+	97869112	97869112	8553170	8	175,168,570,123,123,123,123,626,	0,18962,61840,72664,92295,109773,125367,134548,
#Partially deleted in new
chr8	97869153	98036214	chr8:97869153-98036214	1	+	97961424	98035712	789624	18	93,3,97,123,123,123,123,123,123,123,123,123,414,153,72,135,99,558,	0,61384,72649,92254,109732,125326,134507,137951,138325,147386,148840,152051,158262,161308,163092,163888,164407,166503,
#Partially deleted in new
chr8	97887833	97931106	chr8:97887833-97931106	0	+	97887833	97887833	8553170	2	409,154,	0,43119,
#Partially deleted in new
chr8	97887976	98036212	chr8:97887976-98036212	1	+	97888100	98035712	789624	18	266,570,123,123,123,123,123,123,123,123,123,123,414,153,72,135,99,556,	0,42976,53800,73431,90909,106503,115684,119128,119502,128563,130017,133228,139439,142485,144269,145065,145584,147680,
#Partially deleted in new
chr8	97931340	98036214	chr8:97931340-98036214	0	+	97931340	98035712	789624	16	182,123,123,123,123,123,123,123,123,123,414,153,72,78,99,558,	0,10436,47545,63139,72320,75764,76138,85199,86653,89864,96075,99121,100905,101758,102220,104316,
#Partially deleted in new
chr8	97931424	98003734	chr8:97931424-98003734	0	+	97931424	98003734	789624	5	98,123,123,123,74,	0,29983,47461,63055,72236,
#Partially deleted in new
chr8	97950738	97994596	chr8:97950738-97994596	0	+	97961424	97994596	789624	4	237,123,123,117,	0,10669,28147,43741,
#Partially deleted in new
chr8	97950818	97952302	chr8:97950818-97952302	0	+	97950818	97950818	8553170	2	80,319,	0,1165,
#Partially deleted in new
chr8	97961481	98007502	chr8:97961481-98007502	0	+	97961481	98007502	789624	6	49,123,123,144,123,24,	0,17404,32998,42158,45623,45997,
#Partially deleted in new
chr8	98007478	98035703	chr8:98007478-98035703	0	+	98007478	98021303	789624	9	123,123,127,118,153,72,135,99,47,	0,9061,10515,13731,22983,24767,25563,26082,28178,
#Partially deleted in new
chr8	98016543	98027721	chr8:98016543-98027721	0	+	98016543	98027721	789624	3	119,123,306,	0,1450,10872,
#Partially deleted in new
chr8	98021002	98027678	chr8:98021002-98027678	0	+	98021002	98021002	8553170	2	325,263,	0,6413,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	98024850	98045548	chr8:98024850-98045548	0	-	98024850	98024850	8553170	4	888,146,53,41,	0,20092,20496,20657,
#Partially deleted in new
chr8	98027706	98034310	chr8:98027706-98034310	0	+	98027706	98034200	789624	6	123,153,72,78,77,137,	0,2755,4539,5392,5854,6467,
#Partially deleted in new
chr8	98031441	98036158	chr8:98031441-98036158	0	+	98031441	98031441	8553170	4	876,78,99,502,	0,1657,2119,4215,
#Partially deleted in new
chr8	98032248	98033772	chr8:98032248-98033772	0	+	98032248	98033751	789624	3	69,135,212,	0,793,1312,
#Deleted in new
chr8	98041718	98043085	chr8:98041718-98043085	0	-	98041718	98041718	8553170	2	132,441,	0,926,
#Partially deleted in new
chr8	98041720	98045590	chr8:98041720-98045590	3	-	98041800	98045367	0	5	130,131,146,53,83,	0,924,3222,3626,3787,
#Partially deleted in new
chr8	98041720	98045544	chr8:98041720-98045544	1	-	98041800	98045367	789624	5	130,74,146,53,37,	0,924,3222,3626,3787,
#Partially deleted in new
chr8	98041720	98045545	chr8:98041720-98045545	0	-	98044938	98045367	789624	5	130,131,262,53,38,	0,924,3106,3626,3787,
#Partially deleted in new
chr8	98041720	98045514	chr8:98041720-98045514	1	-	98041800	98045367	0	4	130,131,146,168,	0,924,3222,3626,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	98041725	98044121	chr8:98041725-98044121	3	+	98041725	98041725	8553170	2	1602,387,	0,2009,
#Partially deleted in new
chr8	98041799	98045546	chr8:98041799-98045546	1	-	98041800	98042750	789624	4	51,131,53,39,	0,845,3547,3708,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	98041806	98046469	chr8:98041806-98046469	0	-	98041806	98045367	789624	5	44,131,146,53,755,	0,838,3136,3540,3908,
#Deleted in new
chr8	98042085	98042217	chr8:98042085-98042217	3	-	98042085	98042085	789624	1	132,	0,
#Partially deleted in new
chr8	98042644	98045550	chr8:98042644-98045550	0	-	98042644	98042644	8553170	3	131,457,43,	0,2298,2863,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	98042830	98044132	chr8:98042830-98044132	0	-	98042830	98042830	8553170	2	377,56,	0,1246,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	98043446	98044241	chr8:98043446-98044241	0	-	98043446	98043446	8553170	2	228,303,	0,492,
#Deleted in new
chr8	98044432	98045545	chr8:98044432-98045545	0	-	98044432	98044432	8553170	3	656,53,38,	0,914,1075,
#Deleted in new
chr8	98044867	98045548	chr8:98044867-98045548	0	-	98044867	98044867	8553170	2	532,41,	0,640,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	98048855	98048962	chr8:98048855-98048962	3	+	98048855	98048855	8553170	1	107,	0,
#Partially deleted in new
chr8	98064310	98093610	chr8:98064310-98093610	3	+	98064669	98093333	789624	3	417,954,390,	0,24765,28910,
#Partially deleted in new
chr8	98064521	98093610	chr8:98064521-98093610	1	+	98064669	98093333	789624	2	206,390,	0,28699,
#Partially deleted in new
chr8	98102343	98117241	chr8:98102343-98117241	3	-	98102841	98117096	0	6	561,56,69,55,106,210,	0,2145,3594,3928,6302,14688,
#Partially deleted in new
chr8	98102396	98117159	chr8:98102396-98117159	0	-	98108649	98117096	789624	6	508,56,69,55,68,128,	0,2092,3541,3875,6249,14635,
#Partially deleted in new
chr8	98102438	98117110	chr8:98102438-98117110	0	-	98102841	98117110	789624	6	466,56,69,55,123,79,	0,2050,3499,3833,6207,14593,
#Partially deleted in new
chr8	98102463	98117171	chr8:98102463-98117171	0	-	98102841	98117171	789624	5	441,56,69,55,140,	0,2025,3474,3808,14568,
#Partially deleted in new
chr8	98102618	98106631	chr8:98102618-98106631	0	-	98102618	98102618	8553170	4	286,56,69,360,	0,1870,3319,3653,
#Partially deleted in new
chr8	98113637	98117114	chr8:98113637-98117114	0	-	98113637	98113637	8553170	2	188,83,	0,3394,
#Partially deleted in new
chr8	98117296	98130040	chr8:98117296-98130040	0	+	98123337	98130040	789624	5	34,144,168,176,63,	0,6039,10298,11068,12681,
#Partially deleted in new
chr8	98117311	98159834	chr8:98117311-98159834	3	+	98123337	98158271	789624	16	79,144,168,176,249,88,188,257,94,112,120,116,192,155,363,2218,	0,6024,10283,11053,12666,16637,17160,19170,19549,22766,23457,29256,31503,33173,38738,40305,
#Partially deleted in new
chr8	98117839	98158412	chr8:98117839-98158412	1	+	98123337	98158271	789624	16	26,144,168,176,249,88,188,257,94,112,120,116,192,155,363,796,	0,5496,9755,10525,12138,16109,16632,18642,19021,22238,22929,28728,30975,32645,38210,39777,
#Partially deleted in new
chr8	98155957	98157667	chr8:98155957-98157667	0	+	98155957	98155957	8553170	2	455,51,	0,1659,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	98189832	98294393	chr8:98189832-98294393	1	-	98193050	98294137	789624	12	3258,28,95,64,89,136,97,122,60,172,69,391,	0,3552,4895,6109,13275,15278,22572,32646,46322,62630,64186,104170,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr8	98189832	98294336	chr8:98189832-98294336	3	-	98192977	98294137	789624	11	3258,95,64,89,136,97,122,60,172,69,334,	0,4895,6109,13275,15278,22572,32646,46322,62630,64186,104170,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	98192204	98192313	chr8:98192204-98192313	3	-	98192204	98192204	8553170	1	109,	0,
#Partially deleted in new
chr8	98192757	98251754	chr8:98192757-98251754	0	-	98192757	98192757	8553170	10	333,95,64,89,136,97,248,122,60,147,	0,1970,3184,10350,12353,19647,24281,29721,43397,58850,
#Partially deleted in new
chr8	98195690	98205176	chr8:98195690-98205176	0	-	98195690	98195690	8553170	3	315,89,66,	0,7417,9420,
#Partially deleted in new
chr8	98217024	98254068	chr8:98217024-98254068	0	-	98217024	98217024	8553170	5	174,122,60,172,50,	0,5454,19130,35438,36994,
#Partially deleted in new
chr8	98217202	98252601	chr8:98217202-98252601	0	-	98217202	98217202	8553170	4	60,122,60,139,	0,5276,18952,35260,
#Partially deleted in new
chr8	98231780	98236231	chr8:98231780-98236231	0	-	98231780	98231780	8553170	2	75,77,	0,4374,
#Partially deleted in new
chr8	98252196	98294110	chr8:98252196-98294110	0	-	98252196	98252196	8553170	3	438,69,108,	0,1822,41806,
#Partially deleted in new
chr8	98371227	98441007	chr8:98371227-98441007	0	-	98371227	98371227	8553170	6	451,55,56,192,106,129,	0,7925,16964,62899,65875,69651,
#Partially deleted in new
chr8	98371354	98388247	chr8:98371354-98388247	0	-	98371354	98371354	8553170	3	324,55,56,	0,7798,16837,
#Deleted in new
chr8	98391400	98391514	chr8:98391400-98391514	3	-	98391400	98391400	8553170	1	114,	0,
#Partially deleted in new
chr8	98401402	98526926	chr8:98401402-98526926	0	-	98401402	98401402	8553170	4	111,192,106,185,	0,32724,35700,125339,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	98412881	98413784	chr8:98412881-98413784	7	-	98412881	98412881	16724991	2	106,481,	0,422,
#Deleted in new
chr8	98427021	98432848	chr8:98427021-98432848	3	+	98427979	98429413	789624	2	308,4911,	0,916,
#Deleted in new
chr8	98427530	98432148	chr8:98427530-98432148	1	+	98427979	98429413	789624	2	129,4211,	0,407,
#Deleted in new
chr8	98436668	98439290	chr8:98436668-98439290	3	+	98436668	98436668	8553170	1	2622,	0,
#Partially deleted in new
chr8	98454630	98825671	chr8:98454630-98825671	1	-	98455841	98825540	789624	9	1370,176,193,126,138,115,129,81,157,	0,72111,93338,125033,141401,294645,312612,320108,370884,
#Partially deleted in new
chr8	98454632	98825681	chr8:98454632-98825681	3	-	98455841	98825540	0	11	1368,176,193,126,138,168,165,115,129,81,167,	0,72109,93336,125031,141399,251834,252514,294643,312610,320106,370882,
#Partially deleted in new
chr8	98454694	98942571	chr8:98454694-98942571	1	-	98455841	98883756	0	13	1306,176,193,126,138,168,165,115,129,81,188,128,194,	0,72047,93274,124969,141337,251772,252452,294581,312548,320044,428952,435080,487683,
#Partially deleted in new
chr8	98526414	98548162	chr8:98526414-98548162	0	-	98526414	98526414	8553170	2	503,194,	0,21554,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	98547965	98602255	chr8:98547965-98602255	0	-	98547965	98547965	8553170	4	196,126,138,77,	0,31698,48066,54213,
#Partially deleted in new
chr8	98548090	98825671	chr8:98548090-98825671	0	-	98548090	98825540	789624	7	71,126,138,115,129,81,157,	0,31573,47941,201185,219152,226648,277424,
#Partially deleted in new
chr8	98553329	98601661	chr8:98553329-98601661	0	-	98553329	98553329	8553170	4	75,126,138,129,	0,26334,42702,48203,
#Partially deleted in new
chr8	98579669	98595250	chr8:98579669-98595250	0	-	98579669	98579669	8553170	2	120,390,	0,15191,
#Partially deleted in new
chr8	98579695	98825646	chr8:98579695-98825646	0	-	98596156	98825540	789624	5	94,138,129,81,132,	0,16336,187547,195043,245819,
#Partially deleted in new
chr8	98579758	98596392	chr8:98579758-98596392	0	-	98579758	98579758	8553170	3	31,185,361,	0,15102,16273,
#Partially deleted in new
chr8	98594876	98602182	chr8:98594876-98602182	0	-	98594876	98594876	8553170	3	874,138,4,	0,1155,7302,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	98594972	98602276	chr8:98594972-98602276	0	-	98594972	98594972	8553170	4	146,149,138,98,	0,629,1059,7206,
#Partially deleted in new
chr8	98595329	98825666	chr8:98595329-98825666	0	-	98722813	98825540	789624	10	840,101,168,165,87,227,115,129,81,152,	0,43130,111137,111817,125744,127413,153946,171913,179409,230185,
#Partially deleted in new
chr8	98633546	98633865	chr8:98633546-98633865	7	+	98633546	98633546	16724991	1	319,	0,
#Deleted in new
chr8	98782054	98782628	chr8:98782054-98782628	7	+	98782054	98782054	16724991	1	574,	0,
#Partially deleted in new
chr8	98875256	98883795	chr8:98875256-98883795	0	-	98875256	98875256	8553170	2	438,149,	0,8390,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	98878897	98942645	chr8:98878897-98942645	0	-	98878897	98878897	8553170	3	4937,128,268,	0,10877,63480,
#Partially deleted in new
chr8	98883753	98942827	chr8:98883753-98942827	0	-	98883753	98883756	8553170	2	81,450,	0,58624,
#Deleted in new
chr8	98904602	98905671	chr8:98904602-98905671	7	-	98904602	98904602	16724991	1	1069,	0,
#Deleted in new
chr8	98906259	98906517	chr8:98906259-98906517	7	-	98906259	98906259	16724991	1	258,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	98921232	98921550	chr8:98921232-98921550	3	-	98921232	98921232	8553170	1	318,	0,
#Deleted in new
chr8	98943594	98944098	chr8:98943594-98944098	3	+	98943594	98943594	8553170	1	504,	0,
#Deleted in new
chr8	98944402	98952104	chr8:98944402-98952104	1	+	98948172	98951701	789624	5	421,249,770,100,586,	0,3770,4436,6253,7116,
#Deleted in new
chr8	98944402	98946302	chr8:98944402-98946302	0	+	98944402	98944402	8553170	2	421,272,	0,1628,
#Deleted in new
chr8	98944441	98952104	chr8:98944441-98952104	3	+	98948952	98951701	789624	4	382,770,100,586,	0,4397,6214,7077,
#Deleted in new
chr8	98944441	98951022	chr8:98944441-98951022	1	+	98948952	98950866	789624	3	382,770,367,	0,4397,6214,
#Deleted in new
chr8	98944445	98949307	chr8:98944445-98949307	0	+	98944445	98944445	8553170	2	378,61,	0,4801,
#Deleted in new
chr8	98944455	98949321	chr8:98944455-98949321	0	+	98944455	98944455	8553170	2	368,294,	0,4572,
#Deleted in new
chr8	98944457	98952100	chr8:98944457-98952100	1	+	98948952	98951675	789624	4	366,770,100,500,	0,4381,6198,7143,
#Deleted in new
chr8	98944658	98951762	chr8:98944658-98951762	1	+	98948952	98951701	789624	5	165,249,770,100,244,	0,3514,4180,5997,6860,
#Deleted in new
chr8	98948221	98949604	chr8:98948221-98949604	0	+	98948263	98949604	789624	2	87,766,	0,617,
#Deleted in new
chr8	98948391	98949591	chr8:98948391-98949591	0	+	98948952	98949591	789624	2	295,753,	0,447,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	98961427	98968284	chr8:98961427-98968284	3	+	98961427	98961427	8553170	3	57,44,363,	0,4036,6494,
#Partially deleted in new
chr8	99003406	99003842	chr8:99003406-99003842	7	-	99003406	99003406	16724991	1	436,	0,
#Partially deleted in new
chr8	99013265	99209787	chr8:99013265-99209787	1	+	99013788	99209668	789624	18	82,176,144,121,168,182,175,269,96,123,138,88,192,170,195,125,182,196,	0,494,25157,83046,89687,97832,102434,107911,121366,121749,122330,123399,129708,134575,143283,156773,179610,196326,
#Boundary problem: need 62, got 0, diff 62, mapped 0.0
chr8	99013265	99877580	chr8:99013265-99877580	1	+	99013788	99875666	789624	62	82,176,144,121,168,182,175,269,96,123,138,88,192,170,195,125,182,135,174,110,148,128,235,221,204,172,115,67,409,112,204,127,144,688,138,408,203,208,185,197,182,350,162,156,264,84,176,171,202,189,147,284,128,200,119,806,177,171,177,103,250,2163,	0,494,25157,83046,89687,97832,102434,107911,121366,121749,122330,123399,129708,134575,143283,156773,179610,260932,261815,370942,378291,418271,429135,454148,468333,488421,489570,493871,497838,507633,543184,562392,564224,628545,648088,686259,703905,707079,707597,753508,763509,765416,771049,796109,804274,805185,805447,806146,806655,808028,810566,819103,821931,822273,835510,840185,846038,848510,855023,857519,858182,862152,
#Boundary problem: need 62, got 0, diff 62, mapped 0.0
chr8	99013265	99877580	chr8:99013265-99877580	3	+	99013788	99875666	789624	62	82,176,144,121,168,182,175,269,96,123,138,88,192,170,195,125,182,135,174,110,148,128,235,221,204,172,115,142,409,112,204,127,144,688,138,408,203,208,185,197,182,350,162,156,264,84,176,171,202,189,147,284,128,200,119,806,177,171,177,103,250,2163,	0,494,25157,83046,89687,97832,102434,107911,121366,121749,122330,123399,129708,134575,143283,156773,179610,260932,261815,370942,378291,418271,429135,454148,468333,488421,489570,494504,497838,507633,543184,562392,564224,628545,648088,686259,703905,707079,707597,753508,763509,765416,771049,796109,804274,805185,805447,806146,806655,808028,810566,819103,821931,822273,835510,840185,846038,848510,855023,857519,858182,862152,
#Partially deleted in new
chr8	99013265	99577785	chr8:99013265-99577785	0	+	99013788	99507829	789624	34	82,176,144,121,168,182,175,269,96,123,138,88,192,170,195,125,182,135,174,110,148,128,235,221,204,172,115,67,142,409,112,204,127,296,	0,494,25157,83046,89687,97832,102434,107911,121366,121749,122330,123399,129708,134575,143283,156773,179610,260932,261815,370942,378291,418271,429135,454148,468333,488421,489570,493871,494504,497838,507633,543184,562392,564224,
#Partially deleted in new
chr8	99013273	99121762	chr8:99013273-99121762	1	+	99013788	99121487	789624	8	74,176,144,121,168,182,175,586,	0,486,25149,83038,89679,97824,102426,107903,
#Partially deleted in new
chr8	99091737	99094060	chr8:99091737-99094060	3	-	99091737	99091737	8553170	2	361,132,	0,2191,
#Partially deleted in new
chr8	99103058	99121332	chr8:99103058-99121332	0	+	99103058	99103058	8553170	2	62,156,	0,18118,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	99119351	99120581	chr8:99119351-99120581	3	+	99119351	99119351	8553170	2	117,478,	0,752,
#Partially deleted in new
chr8	99156628	99241502	chr8:99156628-99241502	0	+	99156628	99156628	8553170	4	115,125,182,633,	0,13410,36247,84241,
#Partially deleted in new
chr8	99233047	99234459	chr8:99233047-99234459	7	-	99233047	99233047	16724991	1	1412,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	99275208	99424532	chr8:99275208-99424532	0	+	99275208	99275208	8553170	4	46,110,148,266,	0,108999,116348,149058,
#Deleted in new
chr8	99340304	99341761	chr8:99340304-99341761	7	-	99340304	99340304	16724991	1	1457,	0,
#Deleted in new
chr8	99346051	99348256	chr8:99346051-99348256	7	-	99346051	99346051	16724991	1	2205,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	99389615	99442411	chr8:99389615-99442411	0	+	99389615	99389615	8553170	5	105,148,78,144,11,	0,1941,39954,41905,52785,
#Partially deleted in new
chr8	99520898	99641893	chr8:99520898-99641893	0	+	99520898	99641893	789624	4	112,127,144,83,	0,54759,56591,120912,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	99527825	99527927	chr8:99527825-99527927	3	+	99527825	99527825	8553170	1	102,	0,
#Partially deleted in new
chr8	99536635	99536730	chr8:99536635-99536730	3	-	99536635	99536635	5263520	1	95,	0,
#Partially deleted in new
chr8	99536785	99536861	chr8:99536785-99536861	3	-	99536785	99536785	5263520	1	76,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	99613782	99614081	chr8:99613782-99614081	3	-	99613782	99613782	8553170	1	299,	0,
#Deleted in new
chr8	99695956	99698017	chr8:99695956-99698017	7	+	99695956	99695956	16724991	1	2061,	0,
#Partially deleted in new
chr8	99720867	99778835	chr8:99720867-99778835	0	+	99720867	99720867	8553170	3	180,197,154,	0,45906,57814,
#Partially deleted in new
chr8	99796614	99799187	chr8:99796614-99799187	3	-	99796614	99796614	8553170	2	515,133,	0,2440,
#Deleted in new
chr8	99804158	99804341	chr8:99804158-99804341	7	-	99804158	99804158	16724991	1	183,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	99868056	99877580	chr8:99868056-99877580	0	+	99868056	99868056	8553170	3	409,913,2163,	0,2728,7361,
#Partially deleted in new
chr8	99873199	99893706	chr8:99873199-99893706	0	-	99887504	99892021	789624	5	94,126,129,145,68,	0,4940,14290,18708,20439,
#Partially deleted in new
chr8	99874995	99893707	chr8:99874995-99893707	0	-	99887504	99892021	789624	5	97,126,129,145,69,	0,3144,12494,16912,18643,
#Partially deleted in new
chr8	99877865	99894062	chr8:99877865-99894062	3	-	99887504	99892021	789624	4	400,129,145,424,	0,9624,14042,15773,
#Partially deleted in new
chr8	99878147	99893684	chr8:99878147-99893684	1	-	99887504	99892021	789624	4	118,129,140,46,	0,9342,13760,15491,
#Partially deleted in new
chr8	99878148	99893681	chr8:99878148-99893681	1	-	99887504	99892021	789624	4	117,129,140,43,	0,9341,13759,15490,
#Partially deleted in new
chr8	99878148	99893622	chr8:99878148-99893622	1	-	99887504	99892021	789624	4	117,129,145,180,	0,9341,13759,15294,
#Deleted in new
chr8	99878148	99878794	chr8:99878148-99878794	0	-	99878148	99878148	8553170	1	646,	0,
#Partially deleted in new
chr8	99878149	99893135	chr8:99878149-99893135	1	-	99887504	99892021	789624	4	116,129,145,123,	0,9340,13758,14863,
#Partially deleted in new
chr8	99878150	99893623	chr8:99878150-99893623	1	-	99887504	99892021	789624	4	115,129,145,305,	0,9339,13757,15168,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	99885991	99893697	chr8:99885991-99893697	1	-	99887504	99892021	789624	4	391,129,145,59,	0,1498,5916,7647,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	99887060	99893680	chr8:99887060-99893680	1	-	99887504	99892021	789624	3	558,145,42,	0,4847,6578,
#Partially deleted in new
chr8	99960935	100106116	chr8:99960935-100106116	3	-	99962438	100105921	789624	28	261,50,81,94,96,159,180,162,69,159,163,173,93,195,102,126,115,134,175,162,628,130,169,86,222,63,29,220,	0,1458,1751,1949,4399,16981,21001,26522,35526,38326,41266,42990,45081,47439,77995,79026,80866,86527,91866,101655,102480,105231,110433,111209,119198,132511,144438,144961,
#Partially deleted in new
chr8	99960939	100106116	chr8:99960939-100106116	1	-	99962438	100105921	789624	30	257,50,81,94,96,159,180,162,69,159,117,41,2,173,93,195,102,126,115,134,175,162,628,130,133,86,222,63,29,220,	0,1454,1747,1945,4395,16977,20997,26518,35522,38322,41262,41381,42198,42986,45077,47435,77991,79022,80862,86523,91862,101651,102476,105227,110465,111205,119194,132507,144434,144957,
#Partially deleted in new
chr8	99961050	100105619	chr8:99961050-100105619	1	-	99962438	100080184	789624	26	146,50,81,94,96,159,180,162,69,159,163,173,93,195,102,126,115,134,175,162,628,130,222,110,63,246,	0,1343,1636,1834,4284,16866,20886,26407,35411,38211,41151,42875,44966,47324,77880,78911,80751,86412,91751,101540,102365,105116,119083,130827,132396,144323,
#Partially deleted in new
chr8	99961057	100041967	chr8:99961057-100041967	0	-	99961057	99961057	8553170	17	139,50,81,94,96,159,180,162,69,159,163,173,93,195,102,126,166,	0,1336,1629,1827,4277,16859,20879,26400,35404,38204,41144,42868,44959,47317,77873,78904,80744,
#Partially deleted in new
chr8	99961065	99978051	chr8:99961065-99978051	0	-	99961185	99978051	789624	4	131,94,96,135,	0,1819,4269,16851,
#Partially deleted in new
chr8	99961066	100105962	chr8:99961066-100105962	1	-	99962438	100105921	789624	28	130,50,81,94,96,159,180,162,69,159,163,173,93,195,102,126,115,134,175,162,628,130,133,86,222,63,29,66,	0,1327,1620,1818,4268,16850,20870,26391,35395,38195,41135,42859,44950,47308,77864,78895,80735,86396,91735,101524,102349,105100,110338,111078,119067,132380,144307,144830,
#Partially deleted in new
chr8	99999346	100125798	chr8:99999346-100125798	0	-	99999346	100125798	789624	7	74,163,173,93,195,63,48,	0,2855,4579,6670,9028,94100,126404,
#Deleted in new
chr8	100004582	100004649	chr8:100004582-100004649	3	+	100004582	100004582	5263520	1	67,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	100023981	100024084	chr8:100023981-100024084	3	-	100023981	100023981	5263520	1	103,	0,
#Partially deleted in new
chr8	100038519	100080274	chr8:100038519-100080274	0	-	100038519	100038519	8553170	11	513,126,115,134,175,162,628,130,169,86,141,	0,1442,3282,8943,14282,24071,24896,27647,32849,33625,41614,
#Partially deleted in new
chr8	100038522	100042768	chr8:100038522-100042768	0	-	100038522	100038522	8553170	4	510,126,115,58,	0,1439,3279,4188,
#Partially deleted in new
chr8	100046232	100050896	chr8:100046232-100050896	0	-	100046232	100046232	8553170	3	246,134,46,	0,1230,4618,
#Partially deleted in new
chr8	100071409	100105624	chr8:100071409-100105624	0	-	100071409	100080184	789624	5	128,86,222,63,251,	0,735,8724,22037,33964,
#Partially deleted in new
chr8	100071428	100106317	chr8:100071428-100106317	0	-	100071428	100080184	789624	6	109,86,222,63,29,55,	0,716,8705,22018,33945,34834,
#Partially deleted in new
chr8	100080294	100105621	chr8:100080294-100105621	0	-	100080294	100080294	8553170	4	61,194,63,248,	0,360,13152,25079,
#Partially deleted in new
chr8	100080693	100105613	chr8:100080693-100105613	0	-	100080693	100080693	8553170	4	155,110,63,240,	0,11184,12753,24680,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	100093161	100106000	chr8:100093161-100106000	0	-	100093161	100093161	8553170	3	348,29,104,	0,12212,12735,
#Partially deleted in new
chr8	100133359	100145452	chr8:100133359-100145452	3	-	100133801	100145135	789624	5	691,204,103,1486,402,	0,801,4205,7323,11691,
#Partially deleted in new
chr8	100133555	100145800	chr8:100133555-100145800	0	-	100145024	100145135	789624	5	495,204,103,1486,794,	0,605,4009,7127,11451,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	100136892	100145441	chr8:100136892-100145441	0	-	100136892	100136892	8553170	3	775,1486,391,	0,3790,8158,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	100150583	100154002	chr8:100150583-100154002	3	+	100151355	100153316	0	4	126,70,93,709,	0,763,1240,2710,
#Deleted in new
chr8	100150622	100152209	chr8:100150622-100152209	1	+	100151355	100151966	789624	3	87,70,386,	0,724,1201,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	100150624	100153646	chr8:100150624-100153646	0	+	100150624	100150624	8553170	3	85,583,353,	0,709,2669,
#Partially deleted in new
chr8	100157905	100194680	chr8:100157905-100194680	1	+	100162280	100194423	789624	10	213,142,160,126,62,107,106,131,107,569,	0,4373,7908,19910,25469,26050,26722,29214,33484,36206,
#Partially deleted in new
chr8	100158034	100241903	chr8:100158034-100241903	3	+	100162280	100241022	789624	19	84,142,160,126,62,107,106,131,107,157,339,100,153,167,133,127,165,369,1013,	0,4244,7779,19781,25340,25921,26593,29085,33355,36077,55055,55784,62244,67138,73121,75376,81205,82368,82856,
#Partially deleted in new
chr8	100158334	100194684	chr8:100158334-100194684	1	+	100162280	100194423	789624	10	282,142,160,126,62,107,106,131,107,573,	0,3944,7479,19481,25040,25621,26293,28785,33055,35777,
#Partially deleted in new
chr8	100158427	100241902	chr8:100158427-100241902	1	+	100162280	100241022	789624	19	189,142,160,126,62,107,106,131,107,157,339,100,153,167,133,127,165,369,1012,	0,3851,7386,19388,24947,25528,26200,28692,32962,35684,54662,55391,61851,66745,72728,74983,80812,81975,82463,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	100158867	100158975	chr8:100158867-100158975	3	+	100158867	100158867	8553170	1	108,	0,
#Deleted in new
chr8	100165225	100165478	chr8:100165225-100165478	7	-	100165225	100165225	16724991	1	253,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	100185137	100185239	chr8:100185137-100185239	3	+	100185137	100185137	8553170	1	102,	0,
#Partially deleted in new
chr8	100213086	100231284	chr8:100213086-100231284	0	+	100213086	100213086	8553170	3	342,167,129,	0,12086,18069,
#Partially deleted in new
chr8	100233170	100240515	chr8:100233170-100240515	0	+	100233170	100233170	8553170	3	367,165,113,	0,6069,7232,
#Partially deleted in new
chr8	100240558	100259278	chr8:100240558-100259278	0	+	100240558	100240558	8553170	2	213,237,	0,18483,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr8	100257059	100303259	chr8:100257059-100303259	1	-	100258555	100288174	789624	11	2187,144,214,162,115,163,145,209,767,124,100,	0,2794,4482,6974,7611,11725,12809,17893,30441,43468,46100,
#Partially deleted in new
chr8	100257341	100310327	chr8:100257341-100310327	3	-	100258555	100288174	789624	10	1905,144,214,162,115,163,145,209,767,461,	0,2512,4200,6692,7329,11443,12527,17611,30159,52525,
#Partially deleted in new
chr8	100258884	100260040	chr8:100258884-100260040	0	-	100258884	100258884	8553170	2	362,187,	0,969,
#Partially deleted in new
chr8	100259062	100268920	chr8:100259062-100268920	0	-	100259062	100259062	8553170	5	184,144,214,115,136,	0,791,2479,5608,9722,
#Partially deleted in new
chr8	100259163	100264080	chr8:100259163-100264080	0	-	100259163	100259163	8553170	3	83,144,47,	0,690,4870,
#Partially deleted in new
chr8	100261722	100264580	chr8:100261722-100264580	0	-	100261722	100261722	8553170	2	33,547,	0,2311,
#Partially deleted in new
chr8	100268603	100275034	chr8:100268603-100275034	0	-	100268603	100268603	8553170	3	344,145,82,	0,1265,6349,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	100287677	100336185	chr8:100287677-100336185	0	-	100287677	100288174	789624	4	590,67,82,78,	0,24666,25613,48430,
#Partially deleted in new
chr8	100287704	100309526	chr8:100287704-100309526	0	-	100287704	100288174	789624	2	563,229,	0,21593,
#Partially deleted in new
chr8	100287834	100336204	chr8:100287834-100336204	0	-	100287834	100288174	789624	3	433,82,97,	0,25456,48273,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	100287906	100303230	chr8:100287906-100303230	0	-	100287906	100288174	789624	2	361,71,	0,15253,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	100287906	100303230	chr8:100287906-100303230	0	-	100287906	100288081	789624	3	185,61,71,	0,300,15253,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	100288130	100309910	chr8:100288130-100309910	0	-	100288130	100288174	789624	4	137,124,242,44,	0,12397,15029,21736,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	100300542	100336218	chr8:100300542-100336218	0	-	100300542	100300542	8553170	4	109,242,82,111,	0,2617,12748,35565,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	100300577	100310148	chr8:100300577-100310148	0	-	100300577	100300577	8553170	3	74,206,282,	0,2582,9289,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	100337594	100350707	chr8:100337594-100350707	3	+	100337594	100337594	8553170	2	121,425,	0,12688,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	100381259	100414459	chr8:100381259-100414459	3	-	100381259	100381259	8553170	3	512,37,95,	0,29475,33105,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	100381473	100396213	chr8:100381473-100396213	0	-	100381473	100381473	8553170	3	298,77,117,	0,13907,14623,
#Deleted in new
chr8	100382762	100382845	chr8:100382762-100382845	3	+	100382762	100382762	5263520	1	83,	0,
#Partially deleted in new
chr8	100428833	100430668	chr8:100428833-100430668	3	-	100428833	100428833	8553170	2	535,104,	0,1731,
#Partially deleted in new
chr8	100428893	100430997	chr8:100428893-100430997	0	-	100428893	100428893	8553170	2	475,104,	0,2000,
#Partially deleted in new
chr8	100475674	100483153	chr8:100475674-100483153	3	+	100475674	100475674	8553170	2	162,396,	0,7083,
#Partially deleted in new
chr8	100475689	100501148	chr8:100475689-100501148	1	+	100475689	100475689	8553170	2	147,184,	0,25275,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	100492527	100493713	chr8:100492527-100493713	3	+	100492527	100492527	8553170	2	148,85,	0,1101,
#Partially deleted in new
chr8	100509751	100559742	chr8:100509751-100559742	1	-	100510576	100529833	789624	6	888,166,159,338,103,32,	0,12854,18093,19771,23457,49959,
#Partially deleted in new
chr8	100520771	100559759	chr8:100520771-100559759	1	-	100522554	100529833	789624	5	2000,159,338,103,49,	0,7073,8751,12437,38939,
#Partially deleted in new
chr8	100520775	100559711	chr8:100520775-100559711	1	-	100522554	100529833	789624	5	1996,159,338,103,674,	0,7069,8747,12433,38262,
#Partially deleted in new
chr8	100522513	100533325	chr8:100522513-100533325	1	-	100522554	100529833	789624	3	258,338,117,	0,7009,10695,
#Partially deleted in new
chr8	100522656	100559759	chr8:100522656-100559759	0	-	100522656	100529833	789624	4	115,159,338,49,	0,5188,6866,37054,
#Partially deleted in new
chr8	100529524	100559526	chr8:100529524-100559526	0	-	100529524	100529833	789624	3	336,103,141,	0,3684,29861,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	100529576	100559751	chr8:100529576-100559751	0	-	100529576	100529833	789624	4	284,103,139,41,	0,3632,25002,30134,
#Partially deleted in new
chr8	100529586	100559746	chr8:100529586-100559746	0	-	100529586	100529833	789624	3	274,103,215,	0,3622,29945,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	100550527	100556854	chr8:100550527-100556854	0	-	100550527	100550527	8553170	2	1042,285,	0,6042,
#Partially deleted in new
chr8	100550527	100559643	chr8:100550527-100559643	0	-	100550527	100550527	8553170	2	1042,606,	0,8510,
#Partially deleted in new
chr8	100550723	100551713	chr8:100550723-100551713	7	-	100550723	100550723	16724991	1	990,	0,
#Partially deleted in new
chr8	100572881	100649665	chr8:100572881-100649665	3	-	100573864	100649514	789624	14	1079,57,78,114,204,93,70,88,91,111,65,115,75,217,	0,4137,11229,15984,23757,27467,35612,39118,40113,44738,57445,63015,76392,76567,
#Partially deleted in new
chr8	100573584	100584160	chr8:100573584-100584160	0	-	100573864	100584160	789624	2	376,50,	0,10526,
#Partially deleted in new
chr8	100573664	100618393	chr8:100573664-100618393	1	-	100573864	100618354	789624	11	296,57,78,114,204,93,70,88,91,111,63,	0,3354,10446,15201,22974,26684,34829,38335,39330,43955,44666,
#Partially deleted in new
chr8	100582344	100596706	chr8:100582344-100596706	0	-	100582344	100582344	8553170	4	211,78,114,68,	0,1766,6521,14294,
#Partially deleted in new
chr8	100612038	100663415	chr8:100612038-100663415	0	-	100612038	100635954	789624	6	49,91,111,65,115,274,	0,956,5581,18288,23858,51103,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	100617643	100663219	chr8:100617643-100663219	0	-	100617643	100657867	789624	5	87,65,115,144,78,	0,12683,18253,40080,45498,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	100618580	100619993	chr8:100618580-100619993	3	+	100618580	100618580	8553170	3	184,84,181,	0,494,1232,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	100618581	100619980	chr8:100618581-100619980	0	+	100618581	100618581	8553170	3	64,84,168,	0,493,1231,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	100635929	100663403	chr8:100635929-100663403	0	-	100635929	100657867	789624	4	82,75,144,262,	0,13344,21794,27212,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	100683487	100683574	chr8:100683487-100683574	3	+	100683487	100683487	8553170	1	87,	0,
#Partially deleted in new
chr8	100685815	100704960	chr8:100685815-100704960	0	-	100704297	100704960	789624	3	479,94,35,	0,18481,19110,
#Partially deleted in new
chr8	100702915	100722712	chr8:100702915-100722712	3	-	100704297	100721583	0	15	444,94,131,85,155,111,91,273,96,138,95,140,116,194,1322,	0,1381,2010,2673,3735,3971,6217,6543,9446,9736,10171,12546,14857,15171,18475,
#Partially deleted in new
chr8	100702915	100706931	chr8:100702915-100706931	0	-	100704297	100706931	789624	6	444,111,131,85,155,45,	0,1364,2010,2673,3735,3971,
#Deleted in new
chr8	100702967	100703024	chr8:100702967-100703024	3	-	100702967	100702967	5263520	1	57,	0,
#Partially deleted in new
chr8	100703098	100722087	chr8:100703098-100722087	1	-	100704297	100721448	789624	16	261,94,131,85,155,111,91,273,96,138,95,140,116,194,62,359,	0,1198,1827,2490,3552,3788,6034,6360,9263,9553,9988,12363,14674,14988,18292,18630,
#Partially deleted in new
chr8	100703160	100721992	chr8:100703160-100721992	1	-	100704297	100721583	789624	16	199,94,131,85,155,111,91,273,96,138,95,140,116,98,229,280,	0,1136,1765,2428,3490,3726,5972,6298,9201,9491,9926,12301,14612,15022,18230,18552,
#Partially deleted in new
chr8	100703258	100712404	chr8:100703258-100712404	0	-	100705052	100712404	789624	7	101,94,131,85,91,273,43,	0,1038,1667,2330,5874,6200,9103,
#Partially deleted in new
chr8	100703284	100706779	chr8:100703284-100706779	0	-	100704297	100706779	789624	5	75,94,104,85,129,	0,1012,1641,2304,3366,
#Partially deleted in new
chr8	100704113	100706974	chr8:100704113-100706974	0	-	100704297	100706974	789624	5	277,131,85,155,88,	0,812,1475,2537,2773,
#Partially deleted in new
chr8	100704297	100721508	chr8:100704297-100721508	1	-	100704297	100721508	789624	12	93,131,84,91,273,96,138,95,140,116,194,118,	0,628,1291,4835,5161,8064,8354,8789,11164,13475,13789,17093,
#Partially deleted in new
chr8	100704925	100707191	chr8:100704925-100707191	0	-	100704925	100704925	8553170	4	131,85,155,305,	0,663,1725,1961,
#Partially deleted in new
chr8	100706650	100712761	chr8:100706650-100712761	0	-	100706650	100712761	789624	5	155,111,91,93,110,	0,236,2482,2808,6001,
#Partially deleted in new
chr8	100706693	100715601	chr8:100706693-100715601	0	-	100706693	100706693	8553170	6	29,273,96,138,95,140,	0,2765,5668,5958,6393,8768,
#Partially deleted in new
chr8	100706702	100709847	chr8:100706702-100709847	0	-	100706702	100706702	8553170	4	103,111,91,389,	0,184,2430,2756,
#Partially deleted in new
chr8	100709135	100715496	chr8:100709135-100715496	0	-	100709643	100715496	789624	6	88,215,96,138,95,35,	0,323,3226,3516,3951,6326,
#Partially deleted in new
chr8	100709458	100717890	chr8:100709458-100717890	0	-	100709458	100717890	789624	6	273,96,138,95,131,118,	0,2903,3193,3628,6012,8314,
#Partially deleted in new
chr8	100713137	100721583	chr8:100713137-100721583	0	-	100713137	100713137	8553170	4	44,140,508,193,	0,2324,4635,8253,
#Partially deleted in new
chr8	100713141	100721566	chr8:100713141-100721566	0	-	100713141	100721566	789624	5	40,140,116,50,176,	0,2320,4631,5089,8249,
#Deleted in new
chr8	100717816	100722036	chr8:100717816-100722036	0	-	100717816	100721448	789624	4	72,194,62,303,	0,270,3574,3917,
#Deleted in new
chr8	100718086	100722749	chr8:100718086-100722749	0	-	100718086	100721583	789624	4	194,229,153,52,	0,3304,3647,4611,
#Deleted in new
chr8	100718119	100722092	chr8:100718119-100722092	0	-	100718119	100721583	789624	3	161,229,364,	0,3271,3609,
#Deleted in new
chr8	100718248	100722762	chr8:100718248-100722762	0	-	100718248	100721583	789624	3	32,496,65,	0,3142,4449,
#Deleted in new
chr8	100721400	100722809	chr8:100721400-100722809	0	-	100721400	100721583	789624	3	219,161,112,	0,328,1297,
#Deleted in new
chr8	100721452	100722753	chr8:100721452-100722753	0	-	100721452	100721583	789624	2	437,56,	0,1245,
#Deleted in new
chr8	100721468	100722087	chr8:100721468-100722087	0	-	100721468	100721583	789624	2	418,35,	0,584,
#Partially deleted in new
chr8	100739801	100739927	chr8:100739801-100739927	3	-	100739801	100739801	8553170	1	126,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	100755098	100755195	chr8:100755098-100755195	3	-	100755098	100755098	8553170	1	97,	0,
#Deleted in new
chr8	100776511	100776865	chr8:100776511-100776865	7	-	100776511	100776511	16724991	1	354,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	100831727	100831860	chr8:100831727-100831860	3	-	100831727	100831727	8553170	1	133,	0,
#Deleted in new
chr8	100895770	100896118	chr8:100895770-100896118	7	+	100895770	100895770	16724991	1	348,	0,
#Deleted in new
chr8	100913246	100914388	chr8:100913246-100914388	3	-	100913246	100913246	8553170	1	1142,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	100916524	100952983	chr8:100916524-100952983	3	-	100920692	100948889	0	7	4228,96,164,124,305,197,134,	0,7430,7610,8391,32071,35404,36325,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	100918576	100952129	chr8:100918576-100952129	1	-	100920692	100948889	0	6	2176,96,164,124,305,201,	0,5378,5558,6339,30019,33352,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	100918578	100952993	chr8:100918578-100952993	1	-	100920692	100948889	0	6	2174,96,164,124,305,144,	0,5376,5556,6337,30017,34271,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	100918682	100951449	chr8:100918682-100951449	1	-	100920692	100948889	0	6	2070,96,164,124,305,215,	0,5272,5452,6233,29913,32552,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	100918685	100953341	chr8:100918685-100953341	1	-	100920692	100948889	0	6	2067,96,164,124,305,73,	0,5269,5449,6230,29910,34583,
#Partially deleted in new
chr8	100919061	100924988	chr8:100919061-100924988	0	-	100920692	100924988	789624	5	168,163,96,164,73,	0,1528,4893,5073,5854,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	100919828	100952019	chr8:100919828-100952019	1	-	100920692	100924973	789624	5	924,96,164,124,91,	0,4126,4306,5087,32100,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	100919828	100948162	chr8:100919828-100948162	1	-	100920692	100948145	0	5	924,96,164,124,86,	0,4126,4306,5087,28248,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	100920525	100935055	chr8:100920525-100935055	1	-	100920692	100924973	789624	6	227,96,164,124,65,199,	0,3429,3609,4390,11503,14331,
#Partially deleted in new
chr8	100920586	100951594	chr8:100920586-100951594	1	-	100920692	100948889	0	6	166,96,164,124,305,139,	0,3368,3548,4329,28009,30869,
#Partially deleted in new
chr8	100920602	100952990	chr8:100920602-100952990	1	-	100920692	100948658	789624	6	150,96,164,124,137,141,	0,3352,3532,4313,27993,32247,
#Partially deleted in new
chr8	100920629	100950557	chr8:100920629-100950557	1	-	100920692	100948889	0	6	123,96,164,124,305,152,	0,3325,3505,4286,27966,29776,
#Partially deleted in new
chr8	100920641	100951276	chr8:100920641-100951276	1	-	100920692	100948889	0	6	111,96,164,124,305,91,	0,3313,3493,4274,27954,30544,
#Partially deleted in new
chr8	100920715	100948900	chr8:100920715-100948900	0	-	100920715	100948889	789624	5	37,96,188,124,305,	0,3239,3419,4200,27880,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	100922437	100951969	chr8:100922437-100951969	0	-	100922437	100922437	8553170	5	1613,164,124,305,41,	0,1697,2478,26158,29491,
#Partially deleted in new
chr8	100923984	100951595	chr8:100923984-100951595	0	-	100923984	100923984	8553170	4	314,124,305,140,	0,931,24611,27471,
#Partially deleted in new
chr8	100923986	100950540	chr8:100923986-100950540	0	-	100923986	100923986	8553170	4	312,124,305,135,	0,929,24609,26419,
#Partially deleted in new
chr8	100924921	100950996	chr8:100924921-100950996	0	-	100924921	100948889	789624	3	118,305,88,	0,23674,25987,
#Deleted in new
chr8	100948595	100952619	chr8:100948595-100952619	0	-	100948595	100948889	789624	2	305,691,	0,3333,
#Deleted in new
chr8	100948613	100952883	chr8:100948613-100952883	0	-	100948613	100948889	789624	3	287,380,34,	0,3315,4236,
#Deleted in new
chr8	100948662	100952604	chr8:100948662-100952604	0	-	100948662	100948889	789624	3	238,197,132,	0,3266,3810,
#Deleted in new
chr8	100948734	100952552	chr8:100948734-100952552	0	-	100948734	100948889	789624	3	166,380,80,	0,3194,3738,
#Deleted in new
chr8	100951955	100953388	chr8:100951955-100953388	0	-	100951955	100951955	8553170	3	353,208,120,	0,894,1313,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	100957882	100958180	chr8:100957882-100958180	3	+	100957882	100957882	8553170	1	298,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	101052053	101076251	chr8:101052053-101076251	3	+	101052053	101052053	789624	3	783,82,1083,	0,2444,23115,
#Partially deleted in new
chr8	101122144	101126158	chr8:101122144-101126158	3	-	101122144	101122144	8553170	3	70,178,182,	0,2835,3832,
#Partially deleted in new
chr8	101128986	101133245	chr8:101128986-101133245	0	+	101128986	101128986	8553170	2	284,214,	0,4045,
#Partially deleted in new
chr8	101128993	101133486	chr8:101128993-101133486	3	+	101128993	101128993	8553170	3	277,97,104,	0,4038,4389,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	101137958	101138313	chr8:101137958-101138313	3	+	101137958	101137958	8553170	1	355,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	101139664	101140929	chr8:101139664-101140929	3	+	101139664	101139664	8553170	3	87,116,270,	0,200,995,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	101166804	101169629	chr8:101166804-101169629	3	-	101166804	101166804	8553170	1	2825,	0,
#Partially deleted in new
chr8	101177877	101205461	chr8:101177877-101205461	3	-	101200001	101201741	789624	4	510,108,137,27,	0,22112,23729,27557,
#Partially deleted in new
chr8	101177996	101200093	chr8:101177996-101200093	0	-	101200001	101200093	789624	3	391,45,104,	0,21198,21993,
#Partially deleted in new
chr8	101197051	101205616	chr8:101197051-101205616	1	-	101200001	101201741	789624	4	2188,108,137,182,	0,2938,4555,8383,
#Partially deleted in new
chr8	101198725	101205568	chr8:101198725-101205568	1	-	101199227	101201741	789624	3	514,137,134,	0,2881,6709,
#Deleted in new
chr8	101198923	101200288	chr8:101198923-101200288	0	-	101198923	101198923	8553170	2	316,299,	0,1066,
#Partially deleted in new
chr8	101198932	101204701	chr8:101198932-101204701	1	-	101200001	101201741	789624	4	307,108,137,52,	0,1057,2674,5717,
#Partially deleted in new
chr8	101198936	101201657	chr8:101198936-101201657	0	-	101200018	101201657	789624	3	303,134,51,	0,1053,2670,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	101198937	101205287	chr8:101198937-101205287	1	-	101200001	101201741	789624	4	302,108,137,2955,	0,1052,2669,3395,
#Partially deleted in new
chr8	101199194	101206064	chr8:101199194-101206064	1	-	101200001	101201741	789624	4	45,108,137,211,	0,795,2412,6659,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	101200035	101205474	chr8:101200035-101205474	0	-	101200977	101201741	789624	4	62,237,137,40,	0,732,1571,5399,
#Partially deleted in new
chr8	101201219	101205507	chr8:101201219-101205507	0	-	101201219	101201219	8553170	2	524,73,	0,4215,
#Deleted in new
chr8	101208147	101208558	chr8:101208147-101208558	3	+	101208147	101208147	8553170	1	411,	0,
#Deleted in new
chr8	101223940	101224573	chr8:101223940-101224573	7	-	101223940	101223940	16724991	1	633,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	101261540	101262903	chr8:101261540-101262903	3	-	101261540	101261540	8553170	2	842,137,	0,1226,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	101287444	101293783	chr8:101287444-101293783	3	+	101287444	101287444	8553170	3	59,133,539,	0,232,5800,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	101307366	101307428	chr8:101307366-101307428	3	+	101307366	101307366	8553170	1	62,	0,
#Deleted in new
chr8	101337495	101337649	chr8:101337495-101337649	7	+	101337495	101337495	16724991	1	154,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	101361793	101372707	chr8:101361793-101372707	7	+	101361793	101361793	16724991	4	285,149,944,177,	0,5829,7001,10737,
#Deleted in new
chr8	101366416	101367005	chr8:101366416-101367005	7	-	101366416	101366416	16724991	1	589,	0,
#Deleted in new
chr8	101368909	101369550	chr8:101368909-101369550	5	+	101368909	101368909	16724991	1	641,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	101397635	101397933	chr8:101397635-101397933	3	-	101397635	101397635	8553170	1	298,	0,
#Partially deleted in new
chr8	101411872	101452452	chr8:101411872-101452452	3	-	101411872	101411872	8553170	2	336,242,	0,40338,
#Partially deleted in new
chr8	101461176	101492499	chr8:101461176-101492499	3	-	101461176	101461176	8553170	2	441,50,	0,31273,
#Partially deleted in new
chr8	101492431	101669726	chr8:101492431-101669726	3	+	101492769	101666703	0	16	358,196,68,394,56,157,112,95,159,88,140,32,95,86,65,3138,	0,50809,60283,65987,77907,81236,84976,106625,127107,139205,139794,144465,151699,156982,172022,174157,
#Deleted in new
chr8	101492438	101492789	chr8:101492438-101492789	0	+	101492769	101492789	8553170	2	148,88,	0,263,
#Partially deleted in new
chr8	101492438	101669726	chr8:101492438-101669726	1	+	101492769	101666703	0	16	351,196,68,394,56,157,112,95,159,88,140,32,95,86,65,3138,	0,50802,60276,65980,77900,81229,84969,106618,127100,139198,139787,144458,151692,156975,172015,174150,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	101492441	101544070	chr8:101492441-101544070	0	+	101492441	101492441	8553170	2	348,830,	0,50799,
#Partially deleted in new
chr8	101492757	101666893	chr8:101492757-101666893	1	+	101543268	101666703	0	16	92,196,68,394,56,157,112,95,159,88,140,32,95,86,65,305,	0,50483,59957,65661,77581,80910,84650,106299,126781,138879,139468,144139,151373,156656,171696,173831,
#Partially deleted in new
chr8	101528722	101529569	chr8:101528722-101529569	7	-	101528722	101528722	16724991	2	421,118,	0,729,
#Partially deleted in new
chr8	101562007	101562488	chr8:101562007-101562488	7	-	101562007	101562007	16724991	1	481,	0,
#Partially deleted in new
chr8	101632225	101664510	chr8:101632225-101664510	0	+	101632225	101632225	8553170	4	140,32,95,57,	0,4671,11905,32228,
#Partially deleted in new
chr8	101636769	101664501	chr8:101636769-101664501	0	+	101636769	101636769	8553170	4	159,95,86,48,	0,7361,12644,27684,
#Partially deleted in new
chr8	101686542	102124334	chr8:101686542-102124334	1	-	101689308	101719629	789624	7	2864,106,397,87,50,53,98,	0,6248,32709,200598,229266,333694,437694,
#Partially deleted in new
chr8	101686542	102124907	chr8:101686542-102124907	3	-	101689308	101719629	789624	6	2864,106,397,50,53,338,	0,6248,32709,229266,333694,438027,
#Deleted in new
chr8	101686546	101689093	chr8:101686546-101689093	3	+	101686546	101686546	8553170	2	236,125,	0,2422,
#Partially deleted in new
chr8	101686726	101790961	chr8:101686726-101790961	1	-	101689308	101719629	789624	4	2680,106,397,100,	0,6064,32525,104135,
#Partially deleted in new
chr8	101687894	102124320	chr8:101687894-102124320	1	-	101689308	101719629	789624	7	1512,106,397,50,53,87,84,	0,4896,31357,227914,332342,341115,436342,
#Partially deleted in new
chr8	101688104	101719648	chr8:101688104-101719648	1	-	101689308	101719629	789624	3	1302,106,397,	0,4686,31147,
#Partially deleted in new
chr8	101688463	101790977	chr8:101688463-101790977	1	-	101689058	101719629	789624	4	696,106,397,116,	0,4327,30788,102398,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	101688477	101694389	chr8:101688477-101694389	0	-	101688477	101688477	8553170	2	929,1599,	0,4313,
#Partially deleted in new
chr8	101688642	101790969	chr8:101688642-101790969	0	-	101688642	101719629	789624	3	78,397,108,	0,30609,102219,
#Partially deleted in new
chr8	101692865	101975329	chr8:101692865-101975329	0	-	101692865	101719629	789624	4	31,397,50,70,	0,26386,222943,282394,
#Partially deleted in new
chr8	101719264	101986492	chr8:101719264-101986492	0	-	101719264	101719629	789624	4	384,50,103,37,	0,196544,230993,267191,
#Partially deleted in new
chr8	101719269	101986606	chr8:101719269-101986606	0	-	101719269	101719629	789624	3	379,50,151,	0,196539,267186,
#Partially deleted in new
chr8	101719279	102124334	chr8:101719279-102124334	0	-	101719279	101719629	789624	4	369,50,53,98,	0,196529,300957,404957,
#Partially deleted in new
chr8	101719292	101790977	chr8:101719292-101790977	0	-	101719292	101719629	789624	3	356,90,116,	0,31305,71569,
#Partially deleted in new
chr8	101719294	102124263	chr8:101719294-102124263	0	-	101719294	101719629	789624	5	354,99,50,53,27,	0,133277,196514,300942,404942,
#Partially deleted in new
chr8	101719313	102124261	chr8:101719313-102124261	0	-	101719313	101719629	789624	5	335,90,50,53,25,	0,31284,196495,300923,404923,
#Partially deleted in new
chr8	101719314	102123950	chr8:101719314-102123950	0	-	101719314	101719629	789624	4	334,50,53,192,	0,196494,300922,404444,
#Partially deleted in new
chr8	101719368	102124331	chr8:101719368-102124331	0	-	101719368	101719629	789624	5	280,87,50,53,95,	0,167772,196440,300868,404868,
#Partially deleted in new
chr8	101719372	101790977	chr8:101719372-101790977	0	-	101719372	101719629	789624	4	276,90,56,116,	0,31225,60551,71489,
#Partially deleted in new
chr8	101719385	102124264	chr8:101719385-102124264	0	-	101719385	101719629	789624	6	263,56,99,50,53,28,	0,60538,133186,196423,300851,404851,
#Partially deleted in new
chr8	101719396	101790958	chr8:101719396-101790958	0	-	101719396	101719629	789624	3	252,139,97,	0,1816,71465,
#Partially deleted in new
chr8	101719407	102020406	chr8:101719407-102020406	0	-	101719407	101719629	789624	4	241,87,50,170,	0,167733,196401,300829,
#Partially deleted in new
chr8	101719586	102124857	chr8:101719586-102124857	0	-	101719586	101719629	789624	5	62,87,50,53,288,	0,167554,196222,300650,404983,
#Partially deleted in new
chr8	101779921	101790977	chr8:101779921-101790977	0	-	101779921	101779921	8553170	3	58,198,116,	0,5933,10940,
#Partially deleted in new
chr8	101785855	101790969	chr8:101785855-101790969	0	-	101785855	101785855	8553170	3	197,251,108,	0,2923,5006,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	101788633	101790934	chr8:101788633-101790934	0	-	101788633	101788633	8553170	2	396,73,	0,2228,
#Deleted in new
chr8	101871829	101872549	chr8:101871829-101872549	7	-	101871829	101871829	16724991	1	720,	0,
#Partially deleted in new
chr8	101915511	102124261	chr8:101915511-102124261	0	-	101915511	101915511	8553170	3	347,53,25,	0,104725,208725,
#Deleted in new
chr8	102125431	102125515	chr8:102125431-102125515	3	+	102125431	102125431	5263520	1	84,	0,
#Deleted in new
chr8	102154549	102154725	chr8:102154549-102154725	7	+	102154549	102154549	16724991	1	176,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	102204501	102239118	chr8:102204501-102239118	3	-	102208132	102238874	0	9	3784,114,105,134,95,134,117,156,292,	0,8274,9552,14312,19544,20383,21416,27647,34325,
#Partially deleted in new
chr8	102205624	102238775	chr8:102205624-102238775	1	-	102208132	102232190	789624	11	653,798,960,114,105,134,95,134,117,156,217,	0,763,1701,7151,8429,13189,18421,19260,20293,26524,32934,
#Partially deleted in new
chr8	102207744	102238775	chr8:102207744-102238775	0	-	102208132	102238775	789624	9	541,114,105,134,95,134,117,156,217,	0,5031,6309,11069,16301,17140,18173,24404,30814,
#Partially deleted in new
chr8	102207775	102214229	chr8:102207775-102214229	0	-	102207775	102207775	8553170	3	510,114,176,	0,5000,6278,
#Partially deleted in new
chr8	102208132	102238874	chr8:102208132-102238874	1	-	102208132	102238874	0	8	153,114,105,134,95,134,117,48,	0,4643,5921,10681,15913,16752,17785,30694,
#Partially deleted in new
chr8	102208132	102238874	chr8:102208132-102238874	1	-	102208132	102238874	0	4	153,114,105,48,	0,4643,5921,30694,
#Partially deleted in new
chr8	102208132	102238874	chr8:102208132-102238874	1	-	102208132	102238874	0	2	153,48,	0,30694,
#Partially deleted in new
chr8	102208132	102238874	chr8:102208132-102238874	0	-	102212879	102238874	0	4	153,114,74,48,	0,4643,24098,30694,
#Partially deleted in new
chr8	102212775	102219015	chr8:102212775-102219015	0	-	102212775	102212775	8553170	3	114,105,202,	0,1278,6038,
#Partially deleted in new
chr8	102225974	102238797	chr8:102225974-102238797	0	-	102225974	102225974	8553170	3	60,156,357,	0,6174,12466,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	102242039	102242619	chr8:102242039-102242619	7	-	102242039	102242039	16724991	2	187,108,	0,472,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	102243608	102253333	chr8:102243608-102253333	1	+	102243608	102243608	8553170	2	513,1535,	0,8190,
#Partially deleted in new
chr8	102253011	102412841	chr8:102253011-102412841	3	-	102254301	102412234	0	59	1503,86,145,114,156,85,179,61,131,145,112,244,99,121,221,114,173,74,231,212,269,258,132,112,124,240,161,130,127,119,147,92,149,98,124,96,152,127,211,198,155,112,144,113,110,185,118,155,111,117,212,150,160,190,120,77,82,45,669,	0,4620,5973,8134,8903,11462,12088,13935,15966,17027,18122,19517,22509,22696,23960,25814,26024,27382,28277,32115,32501,33348,34421,35143,36441,40593,40943,41970,42192,42402,42624,43881,44446,45380,45836,46440,46988,51031,52073,58287,58723,59122,59330,60792,61732,70299,73534,74730,76078,76271,89461,92384,93224,93891,107059,107577,108113,108570,159161,
#Partially deleted in new
chr8	102253735	102412689	chr8:102253735-102412689	1	-	102254301	102412234	0	59	779,86,145,114,156,85,176,61,131,145,112,244,99,121,221,114,173,74,231,212,269,258,132,112,124,240,161,130,127,119,147,92,149,98,124,96,152,127,211,198,155,112,144,113,110,185,118,155,111,117,212,150,160,190,120,77,82,45,517,	0,3896,5249,7410,8179,10738,11364,13211,15242,16303,17398,18793,21785,21972,23236,25090,25300,26658,27553,31391,31777,32624,33697,34419,35717,39869,40219,41246,41468,41678,41900,43157,43722,44656,45112,45716,46264,50307,51349,57563,57999,58398,58606,60068,61008,69575,72810,74006,75354,75547,88737,91660,92500,93167,106335,106853,107389,107846,158437,
#Partially deleted in new
chr8	102253945	102261986	chr8:102253945-102261986	0	-	102253945	102253945	8553170	6	569,86,109,145,114,72,	0,3686,4370,5039,7200,7969,
#Partially deleted in new
chr8	102254197	102272931	chr8:102254197-102272931	1	-	102254301	102272688	789624	12	317,86,145,114,156,85,176,61,131,145,112,403,	0,3434,4787,6948,7717,10276,10902,12749,14780,15841,16936,18331,
#Partially deleted in new
chr8	102254197	102412759	chr8:102254197-102412759	1	-	102254301	102412234	789624	59	317,86,145,114,156,85,176,61,131,145,112,244,99,121,221,114,173,74,231,212,269,258,132,112,124,240,161,130,127,119,147,92,149,98,124,96,152,127,211,198,155,112,144,113,110,185,118,155,111,117,194,150,160,190,120,77,82,45,587,	0,3434,4787,6948,7717,10276,10902,12749,14780,15841,16936,18331,21323,21510,22774,24628,24838,26196,27091,30929,31315,32162,33235,33957,35255,39407,39757,40784,41006,41216,41438,42695,43260,44194,44650,45254,45802,49845,50887,57101,57537,57936,58144,59606,60546,69113,72348,73544,74892,75085,88275,91198,92038,92705,105873,106391,106927,107384,157975,
#Deleted in new
chr8	102256391	102257821	chr8:102256391-102257821	3	+	102256391	102256391	8553170	1	1430,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	102265202	102268718	chr8:102265202-102268718	0	-	102265202	102265202	8553170	3	76,61,1626,	0,1744,1890,
#Partially deleted in new
chr8	102265207	102267435	chr8:102265207-102267435	0	-	102265207	102265207	8553170	2	71,489,	0,1739,
#Partially deleted in new
chr8	102271193	102276820	chr8:102271193-102276820	0	-	102271193	102275812	789624	5	52,244,99,121,47,	0,1335,4327,4514,5580,
#Partially deleted in new
chr8	102287504	102293709	chr8:102287504-102293709	0	-	102287504	102287504	8553170	4	60,112,48,105,	0,650,2024,6100,
#Deleted in new
chr8	102298859	102305182	chr8:102298859-102305182	0	-	102298859	102305182	789624	5	112,96,152,124,98,	0,592,1140,5183,6225,
#Deleted in new
chr8	102298866	102305257	chr8:102298866-102305257	0	-	102298866	102305257	789624	5	105,45,152,127,173,	0,585,1133,5176,6218,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	102345895	102347000	chr8:102345895-102347000	0	-	102345895	102345895	8553170	2	500,98,	0,1007,
#Deleted in new
chr8	102359651	102361209	chr8:102359651-102361209	0	-	102359651	102359651	8553170	3	539,77,85,	0,937,1473,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	102417978	102418953	chr8:102417978-102418953	7	+	102417978	102417978	16724991	1	975,	0,
#Deleted in new
chr8	102421196	102421322	chr8:102421196-102421322	3	+	102421196	102421196	8553170	1	126,	0,
#Partially deleted in new
chr8	102451762	102452483	chr8:102451762-102452483	7	+	102451762	102451762	16724991	2	250,52,	0,669,
#Partially deleted in new
chr8	102503752	102504137	chr8:102503752-102504137	7	+	102503752	102503752	16724991	1	385,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	102528739	102538668	chr8:102528739-102538668	3	+	102528739	102528739	8553170	4	116,111,228,285,	0,5015,6993,9644,
#Partially deleted in new
chr8	102528754	102529801	chr8:102528754-102529801	1	+	102528754	102528754	8553170	2	101,491,	0,556,
#Partially deleted in new
chr8	102533240	102533339	chr8:102533240-102533339	3	-	102533240	102533240	8553170	1	99,	0,
#Partially deleted in new
chr8	102551571	102560988	chr8:102551571-102560988	3	+	102551727	102560884	789624	2	476,537,	0,8880,
#Deleted in new
chr8	102560461	102561017	chr8:102560461-102561017	1	+	102560564	102560884	789624	2	111,257,	0,299,
#Deleted in new
chr8	102621508	102622331	chr8:102621508-102622331	7	-	102621508	102621508	16724991	1	823,	0,
#Deleted in new
chr8	102648778	102655902	chr8:102648778-102655902	3	-	102650131	102655601	0	4	1613,913,234,337,	0,2370,3385,6787,
#Deleted in new
chr8	102648785	102654375	chr8:102648785-102654375	1	-	102650131	102653472	0	4	1606,913,234,906,	0,2363,3378,4684,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	102656463	102687118	chr8:102656463-102687118	3	+	102656463	102656463	8553170	5	323,137,131,175,1364,	0,9739,13676,27116,29291,
#Deleted in new
chr8	102688316	102688906	chr8:102688316-102688906	7	-	102688316	102688316	16724991	2	262,167,	0,423,
#Partially deleted in new
chr8	102805516	102809566	chr8:102805516-102809566	0	+	102805516	102805516	8553170	2	59,633,	0,3417,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	102806821	102809971	chr8:102806821-102809971	3	+	102806821	102806821	8553170	2	1732,1038,	0,2112,
#Partially deleted in new
chr8	102826356	102864737	chr8:102826356-102864737	3	-	102828566	102843652	0	12	2322,215,116,163,75,82,135,173,174,197,138,931,	0,2915,3464,6699,7832,8309,9899,12387,13293,17194,31656,37450,
#Partially deleted in new
chr8	102827822	102864193	chr8:102827822-102864193	1	-	102828566	102843652	0	13	856,215,116,163,75,82,135,173,174,197,146,138,387,	0,1449,1998,5233,6366,6843,8433,10921,11827,15728,22176,30190,35984,
#Deleted in new
chr8	102834234	102835475	chr8:102834234-102835475	0	-	102834234	102834234	8553170	2	29,810,	0,431,
#Partially deleted in new
chr8	102834260	102858102	chr8:102834260-102858102	0	-	102834260	102843652	789624	6	3,82,135,173,197,90,	0,405,1995,4483,9290,23752,
#Partially deleted in new
chr8	102836245	102858044	chr8:102836245-102858044	0	-	102836245	102836245	8553170	5	296,173,174,197,32,	0,2498,3404,7305,21767,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	102838901	102872412	chr8:102838901-102872412	0	-	102838901	102843652	789624	5	15,174,197,138,136,	0,748,4649,19111,33375,
#Partially deleted in new
chr8	102843553	102864128	chr8:102843553-102864128	0	-	102843553	102843652	789624	4	194,138,119,322,	0,14459,15516,20253,
#Partially deleted in new
chr8	102843707	102864035	chr8:102843707-102864035	0	-	102843707	102843707	8553170	4	40,167,138,229,	0,6291,14305,20099,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	102849998	102893864	chr8:102849998-102893864	0	-	102849998	102849998	8553170	4	146,138,230,62,	0,8014,36919,43804,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	102864279	103001684	chr8:102864279-103001684	3	+	102864279	102864279	8553170	7	344,164,134,133,1369,58,1676,	0,15615,73344,77641,113307,131345,135729,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	102864299	102880214	chr8:102864299-102880214	0	+	102864299	102864299	8553170	2	324,320,	0,15595,
#Deleted in new
chr8	102864336	102865319	chr8:102864336-102865319	0	+	102864336	102864336	8553170	2	287,217,	0,766,
#Deleted in new
chr8	102864440	102865308	chr8:102864440-102865308	1	+	102864440	102864440	8553170	3	183,84,206,	0,470,662,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	102864457	102882487	chr8:102864457-102882487	0	+	102864457	102864457	8553170	3	166,164,178,	0,15437,17852,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	102864483	102977681	chr8:102864483-102977681	1	+	102864483	102864483	789624	4	140,164,77,95,	0,15411,103113,113103,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	102879897	102885589	chr8:102879897-102885589	0	+	102879897	102879897	8553170	2	161,458,	0,5234,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	102879915	102905128	chr8:102879915-102905128	0	+	102879915	102879915	8553170	3	143,162,65,	0,24308,25148,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	102879915	102904502	chr8:102879915-102904502	0	+	102879915	102879915	8553170	2	143,279,	0,24308,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	102903791	102905295	chr8:102903791-102905295	1	+	102903791	102903791	8553170	3	86,162,232,	0,432,1272,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	102904274	102977876	chr8:102904274-102977876	0	+	102904274	102904274	8553170	2	111,290,	0,73312,
#Deleted in new
chr8	102923370	102924255	chr8:102923370-102924255	7	-	102923370	102923370	16724991	1	885,	0,
#Partially deleted in new
chr8	102925031	102977786	chr8:102925031-102977786	0	+	102925031	102925031	8553170	4	92,134,133,200,	0,12592,16889,52555,
#Partially deleted in new
chr8	102930181	102977738	chr8:102930181-102977738	0	+	102930181	102930181	8553170	4	337,134,133,152,	0,7442,11739,47405,
#Partially deleted in new
chr8	102935994	102937718	chr8:102935994-102937718	0	+	102935994	102935994	8553170	2	136,286,	0,1438,
#Partially deleted in new
chr8	102937681	102972371	chr8:102937681-102972371	0	+	102937681	102937681	8553170	3	76,133,51,	0,4239,34639,
#Partially deleted in new
chr8	102941622	102977876	chr8:102941622-102977876	0	+	102941622	102941622	8553170	3	76,133,290,	0,298,35964,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	102950466	102950564	chr8:102950466-102950564	3	-	102950466	102950466	8553170	1	98,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	102978784	103000184	chr8:102978784-103000184	1	+	102978784	102978784	8553170	4	171,158,58,176,	0,13465,16840,21224,
#Deleted in new
chr8	103016743	103017589	chr8:103016743-103017589	7	+	103016743	103016743	16724991	1	846,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	103020186	103021428	chr8:103020186-103021428	3	-	103020186	103020186	8553170	2	172,242,	0,1000,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr8	103021062	103073051	chr8:103021062-103073051	3	+	103040836	103068747	789624	13	120,171,68,86,95,92,99,69,93,94,98,127,4400,	0,19735,21277,27807,29987,31668,32821,34805,41892,42072,43651,45258,47589,
#Partially deleted in new
chr8	103021062	103069179	chr8:103021062-103069179	1	+	103048894	103068747	789624	11	120,86,95,92,99,69,93,94,98,127,528,	0,27807,29987,31668,32821,34805,41892,42072,43651,45258,47589,
#Partially deleted in new
chr8	103021087	103069076	chr8:103021087-103069076	1	+	103048894	103068747	789624	12	138,68,86,95,92,99,69,93,94,98,127,425,	0,21252,27782,29962,31643,32796,34780,41867,42047,43626,45233,47564,
#Partially deleted in new
chr8	103021101	103069565	chr8:103021101-103069565	1	+	103040836	103068747	789624	13	124,171,68,86,95,92,99,69,93,94,98,127,914,	0,19696,21238,27768,29948,31629,32782,34766,41853,42033,43612,45219,47550,
#Partially deleted in new
chr8	103051116	103063270	chr8:103051116-103063270	0	+	103051116	103051116	8553170	6	28,92,99,69,93,136,	0,1614,2767,4751,11838,12018,
#Partially deleted in new
chr8	103064559	103068825	chr8:103064559-103068825	0	+	103064559	103064559	8553170	3	252,127,174,	0,1761,4092,
#Deleted in new
chr8	103085650	103086590	chr8:103085650-103086590	7	+	103085650	103085650	16724991	1	940,	0,
#Partially deleted in new
chr8	103088795	103090671	chr8:103088795-103090671	7	+	103088795	103088795	16724991	2	160,1249,	0,627,
#Deleted in new
chr8	103091262	103091509	chr8:103091262-103091509	7	+	103091262	103091262	16724991	1	247,	0,
#Partially deleted in new
chr8	103121031	103132966	chr8:103121031-103132966	3	+	103121031	103121031	8553170	2	182,374,	0,11561,
#Partially deleted in new
chr8	103132962	103141342	chr8:103132962-103141342	3	-	103132962	103132962	789624	2	407,89,	0,8291,
#Partially deleted in new
chr8	103132965	103141475	chr8:103132965-103141475	0	-	103132965	103132965	8553170	2	404,17,	0,8493,
#Partially deleted in new
chr8	103140709	103230304	chr8:103140709-103230304	3	+	103140897	103228099	789624	3	348,167,2316,	0,72209,87279,
#Partially deleted in new
chr8	103140712	103230305	chr8:103140712-103230305	1	+	103140897	103227993	789624	2	345,2317,	0,87276,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	103140758	103228218	chr8:103140758-103228218	1	+	103140897	103228099	789624	4	299,105,167,230,	0,59899,72160,87230,
#Partially deleted in new
chr8	103140897	103183449	chr8:103140897-103183449	1	+	103140897	103183449	789624	2	160,83,	0,42469,
#Partially deleted in new
chr8	103140897	103198160	chr8:103140897-103198160	1	+	103140897	103198160	789624	2	160,62,	0,57201,
#Partially deleted in new
chr8	103153138	103228132	chr8:103153138-103228132	0	+	103153138	103153138	8553170	3	172,167,144,	0,59780,74850,
#Deleted in new
chr8	103154613	103154689	chr8:103154613-103154689	3	+	103154613	103154613	5263520	1	76,	0,
#Partially deleted in new
chr8	103156989	103172027	chr8:103156989-103172027	1	-	103156989	103156989	789624	3	49,472,92,	0,8835,14946,
#Partially deleted in new
chr8	103165508	103172140	chr8:103165508-103172140	1	-	103165508	103165508	8553170	2	788,205,	0,6427,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	103190963	103298382	chr8:103190963-103298382	1	-	103190963	103190963	8553170	3	483,65,34,	0,94874,107385,
#Partially deleted in new
chr8	103191228	103202870	chr8:103191228-103202870	0	-	103191228	103191228	8553170	2	218,73,	0,11569,
#Partially deleted in new
chr8	103208191	103215003	chr8:103208191-103215003	0	+	103208191	103208191	8553170	3	306,167,83,	0,4727,6729,
#Partially deleted in new
chr8	103213330	103229145	chr8:103213330-103229145	0	+	103213330	103213330	8553170	2	264,1157,	0,14658,
#Partially deleted in new
chr8	103213410	103228166	chr8:103213410-103228166	0	+	103213410	103213410	8553170	3	184,90,178,	0,6054,14578,
#Deleted in new
chr8	103228424	103229314	chr8:103228424-103229314	3	-	103228424	103228424	8553170	2	336,247,	0,643,
#Partially deleted in new
chr8	103245777	103285907	chr8:103245777-103285907	0	-	103245777	103245777	8553170	2	907,70,	0,40060,
#Partially deleted in new
chr8	103246472	103298763	chr8:103246472-103298763	3	-	103246472	103246472	8553170	4	212,44,65,415,	0,31505,39365,51876,
#Partially deleted in new
chr8	103267395	103285902	chr8:103267395-103285902	0	-	103267395	103267395	8553170	4	125,82,152,65,	0,995,1296,18442,
#Partially deleted in new
chr8	103268267	103285905	chr8:103268267-103285905	0	-	103268267	103268267	8553170	2	205,68,	0,17570,
#Partially deleted in new
chr8	103285732	103298772	chr8:103285732-103298772	1	-	103285732	103285732	8553170	2	170,424,	0,12616,
#Partially deleted in new
chr8	103298432	103332817	chr8:103298432-103332817	3	+	103300107	103331509	789624	7	138,329,197,1018,149,411,1477,	0,1523,20157,26048,29835,31222,32908,
#Partially deleted in new
chr8	103298830	103332859	chr8:103298830-103332859	1	+	103300107	103331509	789624	7	165,329,197,1018,149,411,1519,	0,1125,19759,25650,29437,30824,32510,
#Partially deleted in new
chr8	103298830	103332866	chr8:103298830-103332866	0	+	103300107	103329666	789624	6	165,329,197,1018,411,1526,	0,1125,19759,25650,30824,32510,
#Partially deleted in new
chr8	103298864	103331994	chr8:103298864-103331994	1	+	103300203	103331509	789624	8	131,129,85,197,1018,149,411,654,	0,1091,1335,19725,25616,29403,30790,32476,
#Partially deleted in new
chr8	103298864	103329971	chr8:103298864-103329971	0	+	103300203	103325059	789624	7	131,129,85,197,464,149,317,	0,1091,1335,19725,26170,29403,30790,
#Partially deleted in new
chr8	103298875	103331892	chr8:103298875-103331892	0	+	103300107	103325059	789624	6	120,329,445,149,411,552,	0,1080,26178,29392,30779,32465,
#Partially deleted in new
chr8	103299953	103331786	chr8:103299953-103331786	0	+	103300107	103307768	789624	7	331,130,197,1018,149,411,446,	0,7797,18636,24527,28314,29701,31387,
#Partially deleted in new
chr8	103371514	103382997	chr8:103371514-103382997	3	+	103371656	103382600	789624	4	292,222,217,540,	0,4223,6512,10943,
#Partially deleted in new
chr8	103371549	103376051	chr8:103371549-103376051	1	+	103371656	103376031	789624	2	257,314,	0,4188,
#Partially deleted in new
chr8	103372432	103382989	chr8:103372432-103382989	1	+	103372551	103382600	789624	4	227,222,217,532,	0,3305,5594,10025,
#Partially deleted in new
chr8	103377137	103382614	chr8:103377137-103382614	1	+	103378044	103382600	789624	3	186,217,157,	0,889,5320,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	103383077	103383854	chr8:103383077-103383854	3	-	103383077	103383077	8553170	1	777,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	103384960	103385067	chr8:103384960-103385067	3	+	103384960	103384960	8553170	1	107,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	103398634	103415104	chr8:103398634-103415104	3	-	103400410	103414937	789624	7	1912,146,114,161,86,151,321,	0,2881,3306,4529,6141,8999,16149,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	103398634	103415189	chr8:103398634-103415189	0	-	103401995	103414937	789624	6	1912,146,114,86,151,406,	0,2881,3306,6141,8999,16149,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	103398634	103415171	chr8:103398634-103415171	0	-	103401987	103414937	789624	5	1912,146,114,151,388,	0,2881,3306,8999,16149,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	103398657	103501895	chr8:103398657-103501895	3	-	103400410	103489697	8553170	9	1889,146,114,161,86,151,153,79,100,	0,2858,3283,4506,6118,8976,91039,99518,103138,
#Partially deleted in new
chr8	103400057	103415069	chr8:103400057-103415069	0	-	103403257	103414937	789624	6	489,146,114,161,151,286,	0,1458,1883,3106,7576,14726,
#Deleted in new
chr8	103401486	103402703	chr8:103401486-103402703	0	-	103401486	103401486	8553170	2	175,763,	0,454,
#Partially deleted in new
chr8	103414713	103443453	chr8:103414713-103443453	1	+	103414990	103442882	789624	11	803,200,108,90,156,78,83,165,136,164,659,	0,5550,6261,11342,12383,15898,17945,20912,25422,26741,28081,
#Partially deleted in new
chr8	103414713	103443450	chr8:103414713-103443450	1	+	103414990	103442882	789624	11	803,200,108,90,156,78,83,165,136,164,656,	0,5550,6261,11342,12383,15898,17945,20912,25422,26741,28081,
#Partially deleted in new
chr8	103415364	103420648	chr8:103415364-103420648	0	+	103415364	103415364	8553170	2	152,385,	0,4899,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	103415378	103428717	chr8:103415378-103428717	1	+	103415446	103427294	789624	4	138,200,90,1621,	0,4885,10677,11718,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	103415378	103428707	chr8:103415378-103428707	1	+	103415446	103426077	789624	4	138,200,89,1611,	0,4885,10678,11718,
#Partially deleted in new
chr8	103415384	103440210	chr8:103415384-103440210	0	+	103426088	103440210	789624	7	132,90,156,78,83,165,75,	0,10671,11712,15227,17274,20241,24751,
#Partially deleted in new
chr8	103415388	103443453	chr8:103415388-103443453	3	+	103415446	103442882	789624	11	128,200,108,90,156,78,83,165,136,164,659,	0,4875,5586,10667,11708,15223,17270,20237,24747,26066,27406,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	103415411	103443450	chr8:103415411-103443450	0	+	103415411	103415411	8553170	10	105,200,108,90,3593,83,165,136,164,656,	0,4852,5563,10644,11685,17247,20214,24724,26043,27383,
#Partially deleted in new
chr8	103415411	103427430	chr8:103415411-103427430	1	+	103415446	103427294	789624	5	105,200,108,90,334,	0,4852,5563,10644,11685,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	103439481	103442977	chr8:103439481-103442977	0	+	103439481	103439481	8553170	1	3496,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	103464388	103468985	chr8:103464388-103468985	3	+	103464388	103464388	8553170	1	4597,	0,
#Partially deleted in new
chr8	103481265	103481619	chr8:103481265-103481619	3	-	103481265	103481265	8553170	1	354,	0,
#Partially deleted in new
chr8	103483422	103501676	chr8:103483422-103501676	3	-	103483422	103483422	8553170	3	93,79,277,	0,14753,17977,
#Partially deleted in new
chr8	103500747	104251859	chr8:103500747-104251859	3	+	103500886	104251820	789624	24	315,211,311,926,68,120,100,124,47,113,48,131,172,154,69,157,117,180,110,142,113,102,140,258,	0,196338,265479,384550,409386,411305,414747,415666,417693,420924,427094,430515,435803,442025,460317,474602,488557,512694,513758,744168,747953,748739,750276,750854,
#Partially deleted in new
chr8	103500750	104014615	chr8:103500750-104014615	0	+	103500886	104014615	789624	20	312,211,12,311,926,68,120,100,124,47,113,131,172,154,69,157,117,66,180,110,	0,196335,215558,265476,384547,409383,411302,414744,415663,417690,420921,430512,435800,442022,460314,474599,488554,497434,512691,513755,
#Partially deleted in new
chr8	103559098	103559389	chr8:103559098-103559389	7	-	103559098	103559098	16724991	1	291,	0,
#Partially deleted in new
chr8	103568602	103568978	chr8:103568602-103568978	7	-	103568602	103568602	16724991	1	376,	0,
#Partially deleted in new
chr8	103766226	103768501	chr8:103766226-103768501	0	+	103766226	103766226	8553170	2	311,239,	0,2036,
#Deleted in new
chr8	103768280	103769029	chr8:103768280-103769029	7	+	103768280	103768280	16724991	1	749,	0,
#Partially deleted in new
chr8	103819219	103942846	chr8:103819219-103942846	0	+	103819507	103942846	789624	11	410,926,68,120,100,124,47,113,131,172,74,	0,66078,90914,92833,96275,97194,99221,102452,112043,117331,123553,
#Partially deleted in new
chr8	103819259	104251859	chr8:103819259-104251859	1	+	103819507	104251820	789624	21	370,926,209,120,100,124,47,113,131,172,154,69,157,117,180,110,142,113,102,140,258,	0,66038,91061,92793,96235,97154,99181,102412,112003,117291,123513,141805,156090,170045,194182,195246,425656,429441,430227,431764,432342,
#Partially deleted in new
chr8	103819271	104256094	chr8:103819271-104256094	1	+	103819507	104251820	789624	22	358,926,68,120,100,124,47,113,131,172,154,69,157,117,66,180,110,142,113,102,140,4493,	0,66026,90862,92781,96223,97142,99169,102400,111991,117279,123501,141793,156078,170033,178913,194170,195234,425644,429429,430215,431752,432330,
#Partially deleted in new
chr8	103819386	104251070	chr8:103819386-104251070	0	+	103819507	104251070	789624	26	243,926,68,120,100,124,47,113,131,172,154,69,157,117,66,180,110,33,30,101,173,242,142,113,102,47,	0,65911,90747,92666,96108,97027,99054,102285,111876,117164,123386,141678,155963,169918,178798,194055,195119,196037,221942,249125,274084,329220,425529,429314,430100,431637,
#Partially deleted in new
chr8	103880416	104251859	chr8:103880416-104251859	1	+	103880657	104251820	789624	28	273,926,68,120,100,124,47,113,48,131,172,154,69,157,117,66,110,33,33,101,173,252,242,142,113,102,140,258,	0,4881,29717,31636,35078,35997,38024,41255,47425,50846,56134,62356,80648,94933,108888,117768,134089,135007,160909,188095,213054,214061,268190,364499,368284,369070,370607,371185,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	103912131	103977471	chr8:103912131-103977471	0	+	103912131	103975510	789624	10	41,100,124,47,113,131,172,154,69,2122,	0,3363,4282,6309,9540,19131,24419,30641,48933,63218,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	103915512	103920998	chr8:103915512-103920998	0	+	103915512	103915512	8553170	4	82,124,47,299,	0,901,2928,5187,
#Partially deleted in new
chr8	103915512	103922008	chr8:103915512-103922008	0	+	103915512	103915512	8553170	4	82,124,47,337,	0,901,2928,6159,
#Partially deleted in new
chr8	103915512	103918653	chr8:103915512-103918653	0	+	103915512	103915512	8553170	3	82,124,213,	0,901,2928,
#Partially deleted in new
chr8	104223334	104254425	chr8:104223334-104254425	1	+	104223651	104251820	789624	6	459,142,113,102,140,2824,	0,21581,25366,26152,27689,28267,
#Partially deleted in new
chr8	104223363	104251736	chr8:104223363-104251736	0	+	104223651	104251736	789624	6	430,142,113,102,140,135,	0,21552,25337,26123,27660,28238,
#Partially deleted in new
chr8	104330323	104418912	chr8:104330323-104418912	0	-	104330323	104330323	8553170	5	114,125,22,131,197,	0,1282,1619,50860,88392,
#Partially deleted in new
chr8	104339086	104348674	chr8:104339086-104348674	0	+	104339086	104339086	8553170	3	379,57,134,	0,719,9454,
#Partially deleted in new
chr8	104339533	104348785	chr8:104339533-104348785	0	+	104339533	104339533	8553170	2	329,245,	0,9007,
#Partially deleted in new
chr8	104339795	104356688	chr8:104339795-104356688	1	+	104348552	104356148	789624	3	67,839,565,	0,8745,16328,
#Partially deleted in new
chr8	104339825	104356689	chr8:104339825-104356689	3	+	104348552	104356198	789624	4	37,1041,309,566,	0,8715,15051,16298,
#Partially deleted in new
chr8	104339825	104348931	chr8:104339825-104348931	0	+	104339825	104339825	8553170	3	37,154,391,	0,461,8715,
#Partially deleted in new
chr8	104348540	104356233	chr8:104348540-104356233	1	+	104348552	104356148	789624	2	839,110,	0,7583,
#Partially deleted in new
chr8	104349436	104356558	chr8:104349436-104356558	0	+	104349436	104349436	8553170	2	145,435,	0,6687,
#Deleted in new
chr8	104355055	104356689	chr8:104355055-104356689	0	+	104355055	104355055	8553170	2	130,566,	0,1068,
#Partially deleted in new
chr8	104379423	104467053	chr8:104379423-104467053	3	-	104381197	104466920	0	10	420,131,208,143,142,157,190,180,159,397,	0,1760,13360,44823,48556,50121,64824,67900,71822,87233,
#Partially deleted in new
chr8	104379434	104381411	chr8:104379434-104381411	0	-	104379434	104379434	8553170	2	409,228,	0,1749,
#Partially deleted in new
chr8	104379490	104392856	chr8:104379490-104392856	0	-	104379753	104392856	789624	2	353,73,	0,13293,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	104380512	104418854	chr8:104380512-104418854	0	-	104380512	104380512	8553170	3	802,208,139,	0,12271,38203,
#Partially deleted in new
chr8	104381176	104411815	chr8:104381176-104411815	0	-	104381176	104381176	8553170	3	138,208,67,	0,11607,30572,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	104419511	104421500	chr8:104419511-104421500	7	-	104419511	104419511	16724991	2	1200,788,	0,1201,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	104419511	104421500	chr8:104419511-104421500	0	-	104419511	104419511	8553170	1	1989,	0,
#Partially deleted in new
chr8	104429146	104444368	chr8:104429146-104444368	0	-	104429146	104429146	8553170	2	555,121,	0,15101,
#Partially deleted in new
chr8	104444429	104467044	chr8:104444429-104467044	0	-	104444429	104466920	789624	3	8,180,388,	0,2894,22227,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	104478538	104480783	chr8:104478538-104480783	3	-	104478538	104478538	8553170	1	2245,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	104484368	104484465	chr8:104484368-104484465	3	-	104484368	104484368	5263520	1	97,	0,
#Partially deleted in new
chr8	104489230	104589024	chr8:104489230-104589024	1	-	104490672	104588897	789624	6	2309,133,1105,203,136,206,	0,5846,7741,10086,19708,99588,
#Partially deleted in new
chr8	104489249	104589006	chr8:104489249-104589006	3	-	104490672	104588897	789624	7	2290,133,1105,203,136,57,188,	0,5827,7722,10067,19689,42657,99569,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	104489255	104496142	chr8:104489255-104496142	0	-	104489255	104489255	8553170	2	2284,1066,	0,5821,
#Partially deleted in new
chr8	104491417	104497605	chr8:104491417-104497605	0	-	104491417	104497318	789624	3	122,133,634,	0,3659,5554,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	104491420	104495750	chr8:104491420-104495750	0	-	104491420	104491420	8553170	2	119,674,	0,3656,
#Partially deleted in new
chr8	104497753	104589009	chr8:104497753-104589009	0	-	104497753	104497753	8553170	4	323,203,136,191,	0,1563,11185,91065,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	104504243	104588995	chr8:104504243-104588995	0	-	104504243	104504243	8553170	2	4831,177,	0,84575,
#Deleted in new
chr8	104566085	104566429	chr8:104566085-104566429	7	+	104566085	104566085	16724991	1	344,	0,
#Partially deleted in new
chr8	104699478	104703555	chr8:104699478-104703555	3	-	104699478	104699478	8553170	2	511,46,	0,4031,
#Partially deleted in new
chr8	104703718	105419260	chr8:104703718-105419260	0	+	104703718	104703718	8553170	5	66,130,46,237,117,	0,11127,287905,542574,715425,
#Deleted in new
chr8	104981163	104981579	chr8:104981163-104981579	7	-	104981163	104981163	16724991	1	416,	0,
#Deleted in new
chr8	104990307	104990692	chr8:104990307-104990692	7	-	104990307	104990307	16724991	1	385,	0,
#Deleted in new
chr8	105011106	105011568	chr8:105011106-105011568	7	+	105011106	105011106	16724991	1	462,	0,
#Partially deleted in new
chr8	105142859	105188606	chr8:105142859-105188606	3	-	105142859	105142859	8553170	3	888,72,71,	0,24558,45676,
#Deleted in new
chr8	105194989	105196969	chr8:105194989-105196969	7	-	105194989	105194989	16724991	1	1980,	0,
#Deleted in new
chr8	105287829	105288365	chr8:105287829-105288365	7	-	105287829	105287829	16724991	1	536,	0,
#Partially deleted in new
chr8	105318691	105804532	chr8:105318691-105804532	3	+	105318941	105803538	789624	8	290,159,102,119,112,207,225,3486,	0,100452,125588,242671,315554,470026,480032,482355,
#Partially deleted in new
chr8	105319542	105803870	chr8:105319542-105803870	1	+	105561457	105803538	789624	8	212,159,102,119,112,207,225,2824,	0,99601,124737,241820,314703,469175,479181,481504,
#Partially deleted in new
chr8	105358477	105634299	chr8:105358477-105634299	0	+	105561457	105634299	789624	5	160,159,102,119,54,	0,60666,85802,202885,275768,
#Partially deleted in new
chr8	105358516	105561422	chr8:105358516-105561422	0	+	105358516	105358516	8553170	5	121,132,159,102,60,	0,56358,60627,85763,202846,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	105387145	105789027	chr8:105387145-105789027	0	+	105387145	105387145	8553170	6	780,159,102,119,112,310,	0,31998,57134,174217,247100,401572,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	105419143	105451764	chr8:105419143-105451764	0	+	105419143	105419143	8553170	3	159,102,207,	0,25136,32414,
#Partially deleted in new
chr8	105528883	105803597	chr8:105528883-105803597	1	+	105561457	105803538	789624	6	86,119,112,207,225,2551,	0,32479,105362,259834,269840,272163,
#Partially deleted in new
chr8	105662351	105685765	chr8:105662351-105685765	3	-	105662351	105662351	8553170	3	590,38,21,	0,22537,23393,
#Partially deleted in new
chr8	105669990	105679031	chr8:105669990-105679031	3	+	105669990	105669990	8553170	3	45,119,552,	0,5912,8489,
#Partially deleted in new
chr8	105737279	105737765	chr8:105737279-105737765	7	-	105737279	105737279	16724991	1	486,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	105780245	106060524	chr8:105780245-106060524	3	-	105780245	105780245	789624	5	322,97,118,67,144,	0,2141,18079,147405,280135,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	105784804	106060477	chr8:105784804-106060477	1	-	105784804	105784804	8553170	6	413,155,148,118,56,97,	0,2262,2644,13520,274276,275576,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	105785003	106060467	chr8:105785003-106060467	0	-	105785003	105785003	8553170	5	214,148,118,67,87,	0,2445,13321,142647,275377,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	105785054	105911869	chr8:105785054-105911869	0	-	105785054	105785054	8553170	5	163,155,148,118,65,	0,2012,2394,13270,126750,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	105796939	106060443	chr8:105796939-106060443	0	-	105796939	105796939	8553170	4	285,118,76,63,	0,1385,130702,263441,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	105798090	106060461	chr8:105798090-106060461	0	-	105798090	105798090	8553170	3	352,67,81,	0,129560,262290,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	105798326	106060491	chr8:105798326-106060491	0	-	105798326	105798326	8553170	4	116,67,100,111,	0,129324,261808,262054,
#Partially deleted in new
chr8	105826569	105834038	chr8:105826569-105834038	3	+	105826569	105826569	8553170	2	171,274,	0,7195,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	105929125	105929238	chr8:105929125-105929238	3	-	105929125	105929125	8553170	1	113,	0,
#Partially deleted in new
chr8	106215762	106217218	chr8:106215762-106217218	7	+	106215762	106215762	16724991	2	920,197,	0,1259,
#Partially deleted in new
chr8	106265434	106268741	chr8:106265434-106268741	3	-	106265434	106265434	8553170	2	410,79,	0,3228,
#Deleted in new
chr8	106270143	106272899	chr8:106270143-106272899	3	+	106270143	106270143	8553170	2	224,1094,	0,1662,
#Deleted in new
chr8	106270235	106272206	chr8:106270235-106272206	0	+	106270235	106270235	8553170	2	132,502,	0,1469,
#Partially deleted in new
chr8	106359475	106752682	chr8:106359475-106752682	1	+	106359613	106750941	789624	16	161,197,83,108,114,150,185,764,169,163,81,126,153,96,74,1877,	0,159467,319734,323723,324770,333252,343430,346906,351146,354347,378044,379982,380867,382746,386313,391330,
#Partially deleted in new
chr8	106359475	106751861	chr8:106359475-106751861	1	+	106359613	106750941	789624	15	161,197,83,108,114,150,185,764,169,163,126,153,96,74,1056,	0,159467,319734,323723,324770,333252,343430,346906,351146,354347,379982,380867,382746,386313,391330,
#Partially deleted in new
chr8	106447923	106751173	chr8:106447923-106751173	1	+	106448022	106750941	789624	16	125,197,83,108,114,150,185,764,169,163,81,126,153,96,74,368,	0,71019,231286,235275,236322,244804,254982,258458,262698,265899,289596,291534,292419,294298,297865,302882,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	106520473	106657548	chr8:106520473-106657548	3	-	106520473	106520473	8553170	4	89,113,255,47,	0,2247,135637,137028,
#Partially deleted in new
chr8	106580973	106684340	chr8:106580973-106684340	0	+	106581238	106684340	789624	4	278,83,108,95,	0,98236,102225,103272,
#Partially deleted in new
chr8	106581003	106605204	chr8:106581003-106605204	0	+	106581003	106581003	8553170	2	248,423,	0,23778,
#Partially deleted in new
chr8	106618125	106707690	chr8:106618125-106707690	1	+	106618164	106707234	789624	7	58,83,108,114,150,185,1309,	0,61084,65073,66120,74602,84780,88256,
#Partially deleted in new
chr8	106657667	106751861	chr8:106657667-106751861	0	+	106657986	106739522	789624	6	518,126,153,96,74,1056,	0,81790,82675,84554,88121,93138,
#Partially deleted in new
chr8	106657853	106752694	chr8:106657853-106752694	3	+	106657986	106750941	789624	14	332,83,108,114,150,185,764,169,163,126,153,96,74,1889,	0,21356,25345,26392,34874,45052,48528,52768,55969,81604,82489,84368,87935,92952,
#Partially deleted in new
chr8	106657890	106706982	chr8:106657890-106706982	0	+	106657986	106679233	789624	7	195,83,108,114,150,185,601,	0,21319,25308,26355,34837,45015,48491,
#Deleted in new
chr8	106697426	106698013	chr8:106697426-106698013	7	-	106697426	106697426	16724991	1	587,	0,
#Partially deleted in new
chr8	106706380	106751861	chr8:106706380-106751861	0	+	106706380	106750941	789624	7	765,169,163,153,96,74,1056,	0,4241,7442,33962,35841,39408,44425,
#Partially deleted in new
chr8	106726011	106752679	chr8:106726011-106752679	1	+	106726243	106750941	789624	6	298,126,153,96,74,1874,	0,13446,14331,16210,19777,24794,
#Partially deleted in new
chr8	106726106	106752016	chr8:106726106-106752016	1	+	106726243	106750941	789624	7	203,81,126,153,96,74,1211,	0,11413,13351,14236,16115,19682,24699,
#Partially deleted in new
chr8	106726184	106751195	chr8:106726184-106751195	1	+	106740441	106750941	789624	7	73,81,126,153,96,74,390,	0,11335,13273,14158,16037,19604,24621,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	106729794	106729856	chr8:106729794-106729856	3	-	106729794	106729794	8553170	1	62,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	106740242	106742484	chr8:106740242-106742484	0	+	106740242	106740242	8553170	2	253,263,	0,1979,
#Partially deleted in new
chr8	106759482	106770245	chr8:106759482-106770245	3	-	106761036	106770190	789624	2	2032,723,	0,10040,
#Deleted in new
chr8	106980966	106981571	chr8:106980966-106981571	7	-	106980966	106980966	16724991	1	605,	0,
#Deleted in new
chr8	107173199	107173809	chr8:107173199-107173809	7	-	107173199	107173199	16724991	1	610,	0,
#Partially deleted in new
chr8	107249481	107498010	chr8:107249481-107498010	2	-	107251854	107497558	0	9	2534,131,167,102,128,233,122,156,749,	0,14739,35200,44454,53758,72414,86668,97460,247780,
#Partially deleted in new
chr8	107249492	107498055	chr8:107249492-107498055	0	-	107251854	107497558	0	9	2523,131,167,102,128,230,122,156,794,	0,14728,35189,44443,53747,72406,86657,97449,247769,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	107251511	107336522	chr8:107251511-107336522	1	-	107251854	107322103	789624	8	504,131,167,102,128,230,122,139,	0,12709,33170,42424,51728,70387,84638,84872,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	107251511	107336522	chr8:107251511-107336522	1	-	107251854	107322103	789624	8	504,131,167,102,128,233,122,139,	0,12709,33170,42424,51728,70384,84638,84872,
#Partially deleted in new
chr8	107251526	107321989	chr8:107251526-107321989	0	-	107251526	107251526	8553170	4	489,131,102,91,	0,12694,42409,70372,
#Partially deleted in new
chr8	107283996	107321993	chr8:107283996-107321993	0	-	107283996	107283996	8553170	4	852,102,128,95,	0,9939,19243,37902,
#Partially deleted in new
chr8	107284518	107295541	chr8:107284518-107295541	0	-	107284518	107284518	8553170	2	330,1606,	0,9417,
#Partially deleted in new
chr8	107346982	107494995	chr8:107346982-107494995	0	-	107346982	107347073	789624	2	115,433,	0,147580,
#Partially deleted in new
chr8	107647278	107648032	chr8:107647278-107648032	7	+	107647278	107647278	16724991	1	754,	0,
#Deleted in new
chr8	107884493	107884611	chr8:107884493-107884611	7	+	107884493	107884493	16724991	1	118,	0,
#Partially deleted in new
chr8	107899315	108083203	chr8:107899315-108083203	1	-	107901074	108082638	789624	5	1875,186,144,263,280,	0,58764,61358,183229,183608,
#Partially deleted in new
chr8	107899315	108081956	chr8:107899315-108081956	1	-	107901074	107989137	789624	5	1875,189,144,189,90,	0,58764,61358,89740,182551,
#Partially deleted in new
chr8	107899316	108083648	chr8:107899316-108083648	3	-	107901074	108082638	789624	6	1874,189,144,189,263,452,	0,58763,61357,89739,183228,183880,
#Partially deleted in new
chr8	107901101	108073089	chr8:107901101-108073089	0	-	107901101	107989137	789624	5	89,189,144,189,63,	0,56978,59572,87954,171925,
#Partially deleted in new
chr8	107958227	107989555	chr8:107958227-107989555	0	-	107958227	107989137	789624	4	41,144,189,205,	0,2446,30828,31123,
#Partially deleted in new
chr8	107960736	108082836	chr8:107960736-108082836	0	-	107960736	108082638	789624	3	81,189,292,	0,28319,121808,
#Partially deleted in new
chr8	107960747	107997254	chr8:107960747-107997254	0	-	107960747	107996921	789624	3	70,189,343,	0,28308,36164,
#Deleted in new
chr8	107983115	107983965	chr8:107983115-107983965	7	+	107983115	107983115	16724991	1	850,	0,
#Partially deleted in new
chr8	107989108	108083642	chr8:107989108-108083642	0	-	107989108	108082638	789624	3	136,263,169,	0,93436,94365,
#Deleted in new
chr8	108131099	108132114	chr8:108131099-108132114	7	-	108131099	108131099	16724991	1	1015,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	108201215	108203346	chr8:108201215-108203346	0	-	108201215	108201215	8553170	2	708,364,	0,1767,
#Partially deleted in new
chr8	108201742	108248765	chr8:108201742-108248765	1	-	108201884	108248702	0	13	181,135,103,110,102,127,125,126,105,43,118,115,153,	0,1240,1658,12864,14669,15591,26524,27327,33255,34418,38215,40056,46870,
#Partially deleted in new
chr8	108201742	108229136	chr8:108201742-108229136	0	-	108201884	108229136	789624	5	181,135,103,125,67,	0,1240,1658,26524,27327,
#Partially deleted in new
chr8	108201779	108248698	chr8:108201779-108248698	1	-	108201884	108240001	789624	12	144,135,103,110,102,127,125,126,105,43,118,86,	0,1203,1621,12827,14632,15554,26487,27290,33218,34381,38178,46833,
#Partially deleted in new
chr8	108201864	108242833	chr8:108201864-108242833	0	-	108201864	108201864	8553170	13	59,135,103,110,102,127,125,126,105,43,118,115,722,	0,1118,1536,12742,14547,15469,26402,27205,33133,34296,38093,39934,40247,
#Partially deleted in new
chr8	108203469	108231908	chr8:108203469-108231908	0	-	108203469	108203469	8553170	7	34,110,102,127,125,126,102,	0,11137,12942,13864,24797,25600,28337,
#Partially deleted in new
chr8	108214606	108248719	chr8:108214606-108248719	0	-	108214606	108248702	789624	6	110,102,127,125,126,107,	0,1805,2727,13660,14463,34006,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	108216475	108227932	chr8:108216475-108227932	0	-	108216475	108216475	8553170	4	38,127,116,138,	0,858,5012,11319,
#Partially deleted in new
chr8	108217380	108248718	chr8:108217380-108248718	0	-	108240075	108248702	789624	8	80,125,126,105,43,141,115,106,	0,10886,11689,17617,18780,22577,24418,31232,
#Deleted in new
chr8	108228176	108229398	chr8:108228176-108229398	0	-	108228176	108228176	8553170	2	215,329,	0,893,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	108233393	108248698	chr8:108233393-108248698	0	-	108233624	108248698	789624	6	279,105,43,118,115,86,	0,1604,2767,6564,8405,15219,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	108234283	108248802	chr8:108234283-108248802	0	-	108234283	108234283	8553170	5	819,43,118,115,190,	0,1877,5674,7515,14329,
#Partially deleted in new
chr8	108235030	108248716	chr8:108235030-108248716	0	-	108242298	108248702	789624	6	72,43,118,115,235,104,	0,1130,4927,6768,7081,13582,
#Partially deleted in new
chr8	108235053	108248717	chr8:108235053-108248717	0	-	108242175	108248702	789624	6	49,43,118,115,145,105,	0,1107,4904,6745,7058,13559,
#Partially deleted in new
chr8	108235093	108248668	chr8:108235093-108248668	0	-	108235093	108248668	789624	4	9,43,115,56,	0,1067,6705,13519,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	108235096	108248717	chr8:108235096-108248717	0	-	108235096	108241856	789624	6	6,43,118,115,171,105,	0,1064,4861,6702,8196,13516,
#Partially deleted in new
chr8	108241892	108355726	chr8:108241892-108355726	0	-	108241892	108241892	8553170	3	21,128,396,	0,67443,113438,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	108309021	108435333	chr8:108309021-108435333	2	-	108309021	108309021	8553170	3	442,93,180,	0,112975,126132,
#Partially deleted in new
chr8	108378830	108379545	chr8:108378830-108379545	7	-	108378830	108378830	16724991	2	37,358,	0,357,
#Partially deleted in new
chr8	108443600	108455902	chr8:108443600-108455902	0	+	108446258	108455902	789624	6	98,140,114,65,86,30,	0,2561,6222,6827,9461,12272,
#Partially deleted in new
chr8	108443623	108486912	chr8:108443623-108486912	3	+	108443658	108486598	789624	11	75,114,65,86,58,86,60,82,111,105,401,	0,6199,6804,9438,12249,26202,26438,32258,33158,35382,42888,
#Partially deleted in new
chr8	108443632	108456073	chr8:108443632-108456073	0	+	108443632	108443632	8553170	5	66,114,65,86,201,	0,6190,6795,9429,12240,
#Partially deleted in new
chr8	108443636	108470962	chr8:108443636-108470962	0	+	108443636	108443636	8553170	8	62,114,65,86,58,86,60,109,	0,6186,6791,9425,12236,26189,26425,27217,
#Partially deleted in new
chr8	108450430	108486563	chr8:108450430-108486563	0	+	108450430	108486563	789624	6	62,86,58,86,60,52,	0,2631,5442,19395,19631,36081,
#Partially deleted in new
chr8	108464046	108486636	chr8:108464046-108486636	0	+	108464046	108464046	8553170	7	86,86,60,82,111,105,125,	0,5779,6015,11835,12735,14959,22465,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	108473850	108486918	chr8:108473850-108486918	0	+	108473850	108473850	8553170	4	2113,111,105,407,	0,2931,5155,12661,
#Deleted in new
chr8	108572642	108573174	chr8:108572642-108573174	7	+	108572642	108572642	16724991	1	532,	0,
#Partially deleted in new
chr8	108581061	108626767	chr8:108581061-108626767	3	+	108581061	108581061	8553170	3	92,78,212,	0,5599,45494,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	108606849	108787594	chr8:108606849-108787594	0	-	108606849	108606849	789624	4	916,75,145,119,	0,1902,48443,180626,
#Deleted in new
chr8	108652372	108653315	chr8:108652372-108653315	7	+	108652372	108652372	16724991	1	943,	0,
#Deleted in new
chr8	108783536	108787615	chr8:108783536-108787615	3	-	108784180	108785098	789624	2	1601,140,	0,3939,
#Partially deleted in new
chr8	109086620	109119567	chr8:109086620-109119567	3	+	109087512	109119455	789624	3	263,877,520,	0,804,32427,
#Partially deleted in new
chr8	109087423	109119584	chr8:109087423-109119584	1	+	109087512	109119455	789624	2	878,537,	0,31624,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	109240918	109334385	chr8:109240918-109334385	3	-	109243008	109334010	789624	10	2383,160,126,145,205,183,181,186,155,493,	0,4403,30086,34433,40049,48832,52425,55465,81390,92974,
#Partially deleted in new
chr8	109242674	109329934	chr8:109242674-109329934	1	-	109243008	109329835	789624	10	627,160,126,145,205,183,181,186,155,130,	0,2647,28330,32677,38293,47076,50669,53709,79634,87130,
#Partially deleted in new
chr8	109242674	109334118	chr8:109242674-109334118	0	-	109313834	109334010	789624	11	627,160,126,145,205,183,181,186,92,155,226,	0,2647,28330,32677,38293,47076,50669,53709,71122,79634,91218,
#Partially deleted in new
chr8	109275414	109329892	chr8:109275414-109329892	0	-	109313834	109329835	789624	8	82,205,183,181,186,92,155,88,	0,5553,14336,17929,20969,38382,46894,54390,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	109298597	109316513	chr8:109298597-109316513	3	+	109298597	109298597	8553170	2	332,1311,	0,16605,
#Partially deleted in new
chr8	109334323	109343664	chr8:109334323-109343664	1	+	109336136	109343481	0	5	79,77,71,75,260,	0,1804,4996,6165,9081,
#Partially deleted in new
chr8	109334323	109345952	chr8:109334323-109345952	3	+	109334468	109343481	0	5	151,77,71,75,2548,	0,1804,4996,6165,9081,
#Partially deleted in new
chr8	109334323	109343624	chr8:109334323-109343624	0	+	109336136	109340460	789624	5	79,77,71,120,220,	0,1804,4996,6120,9081,
#Partially deleted in new
chr8	109334325	109345953	chr8:109334325-109345953	0	+	109334468	109340460	789624	5	149,77,71,120,2549,	0,1802,4994,6118,9079,
#Partially deleted in new
chr8	109334338	109343670	chr8:109334338-109343670	0	+	109336136	109340498	789624	5	64,72,71,73,266,	0,1794,4981,6152,9066,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	109334343	109343855	chr8:109334343-109343855	1	+	109336136	109342778	789624	6	63,77,71,75,120,451,	0,1784,4976,6145,8346,9061,
#Partially deleted in new
chr8	109334345	109339746	chr8:109334345-109339746	0	+	109334345	109334345	8553170	3	57,77,427,	0,1782,4974,
#Partially deleted in new
chr8	109334346	109343671	chr8:109334346-109343671	0	+	109334346	109334346	8553170	4	128,71,75,267,	0,4973,6142,9058,
#Partially deleted in new
chr8	109334348	109336588	chr8:109334348-109336588	0	+	109334348	109334348	8553170	2	126,461,	0,1779,
#Partially deleted in new
chr8	109334350	109344599	chr8:109334350-109344599	0	+	109334468	109340498	789624	5	124,77,71,73,1195,	0,1777,4969,6140,9054,
#Partially deleted in new
chr8	109334367	109343665	chr8:109334367-109343665	0	+	109334367	109334367	8553170	3	107,77,261,	0,1760,9037,
#Partially deleted in new
chr8	109334376	109340808	chr8:109334376-109340808	0	+	109334376	109334376	8553170	4	98,77,71,320,	0,1751,4943,6112,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	109334380	109343584	chr8:109334380-109343584	0	+	109334380	109334380	8553170	4	1824,71,75,180,	0,4939,6108,9024,
#Partially deleted in new
chr8	109335925	109343671	chr8:109335925-109343671	0	+	109335925	109335925	8553170	4	279,71,120,267,	0,3394,4518,7479,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	109338341	109343664	chr8:109338341-109343664	0	+	109338341	109338341	8553170	3	1049,75,260,	0,2147,5063,
#Partially deleted in new
chr8	109340364	109345952	chr8:109340364-109345952	0	+	109340364	109340364	8553170	2	199,2548,	0,3040,
#Partially deleted in new
chr8	109362476	109530330	chr8:109362476-109530330	3	+	109362580	109530090	789624	78	177,90,145,109,58,94,54,74,43,71,111,90,269,92,160,136,144,158,114,150,125,164,173,148,155,123,106,111,165,122,133,196,143,105,189,171,227,985,249,150,175,157,157,80,130,130,242,137,1030,192,152,160,172,89,149,130,119,130,174,104,130,122,91,149,123,112,117,166,233,168,158,136,342,152,147,154,237,251,	0,2070,18893,19986,21593,23060,26020,26602,27975,31938,33550,35982,37599,39020,42077,42518,43858,45572,47388,49788,50944,56620,58041,62608,64525,66863,67455,70629,72713,73861,75847,76420,78233,78798,79530,80469,81199,82184,85666,86861,88498,89647,90241,91690,92246,93785,97118,99295,101739,104101,112641,114031,114748,117074,117514,118956,120510,122567,124171,127475,128495,129396,131184,134442,134673,135985,136178,141850,145186,145620,148300,152693,155690,159709,160267,160756,164307,167603,
#Deleted in new
chr8	109470130	109471117	chr8:109470130-109471117	7	+	109470130	109470130	16724991	1	987,	0,
#Partially deleted in new
chr8	109480550	109530260	chr8:109480550-109530260	0	+	109480550	109530090	789624	24	111,130,119,130,174,104,130,122,91,149,123,112,117,166,233,168,158,136,342,152,147,154,237,181,	0,882,2436,4493,6097,9401,10421,11322,13110,16368,16599,17911,18104,23776,27112,27546,30226,34619,37616,41635,42193,42682,46233,49529,
#Partially deleted in new
chr8	109497228	109499305	chr8:109497228-109499305	0	+	109497228	109497228	8553170	3	44,112,651,	0,1233,1426,
#Deleted in new
chr8	109522822	109527027	chr8:109522822-109527027	0	+	109522822	109522822	8553170	3	68,154,244,	0,410,3961,
#Partially deleted in new
chr8	109539710	109565160	chr8:109539710-109565160	1	+	109550824	109564559	789624	7	209,98,79,159,108,92,722,	0,11099,14154,15018,17224,21127,24728,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	109539758	109557917	chr8:109539758-109557917	0	+	109539758	109539758	8553170	6	161,98,79,159,108,187,	0,11051,14106,14970,17176,17972,
#Partially deleted in new
chr8	109539837	109557027	chr8:109539837-109557027	0	+	109554857	109557027	789624	4	82,79,159,93,	0,14027,14891,17097,
#Partially deleted in new
chr8	109540074	109564559	chr8:109540074-109564559	1	+	109550824	109564559	789624	8	387,98,79,159,108,92,139,117,	0,10735,13790,14654,16860,20763,23322,24368,
#Partially deleted in new
chr8	109540176	109565996	chr8:109540176-109565996	3	+	109550824	109564559	789624	7	285,98,79,159,108,92,1558,	0,10633,13688,14552,16758,20661,24262,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	109540184	109560866	chr8:109540184-109560866	0	+	109550824	109557763	789624	7	277,98,79,159,108,189,29,	0,10625,13680,14544,16750,17546,20653,
#Partially deleted in new
chr8	109540625	109564508	chr8:109540625-109564508	0	+	109550824	109564508	789624	7	100,98,79,159,108,92,70,	0,10184,13239,14103,16309,20212,23813,
#Partially deleted in new
chr8	109540625	109565988	chr8:109540625-109565988	1	+	109550824	109564559	789624	7	100,98,79,159,108,92,1550,	0,10184,13239,14103,16309,20212,23813,
#Partially deleted in new
chr8	109550246	109554801	chr8:109550246-109554801	0	+	109550824	109554801	789624	3	661,79,73,	0,3618,4482,
#Partially deleted in new
chr8	109550824	109564559	chr8:109550824-109564559	1	+	109550824	109564559	789624	7	83,79,159,108,92,139,117,	0,3040,3904,6110,10013,12572,13618,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	109573977	109648836	chr8:109573977-109648836	3	-	109574905	109644659	789624	9	2036,150,204,103,198,202,81,121,149,	0,3890,5821,12082,44864,68750,70658,71906,74710,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	109574175	109648779	chr8:109574175-109648779	1	-	109574905	109644659	789624	9	1838,150,204,103,198,220,81,121,92,	0,3692,5623,11884,44666,68552,70460,71708,74512,
#Partially deleted in new
chr8	109574175	109691604	chr8:109574175-109691604	1	-	109574905	109691357	789624	6	1838,150,204,103,198,272,	0,3692,5623,11884,44666,117157,
#Partially deleted in new
chr8	109574181	109643675	chr8:109574181-109643675	1	-	109574905	109642947	789624	6	1832,150,204,103,198,948,	0,3686,5617,11878,44660,68546,
#Partially deleted in new
chr8	109574181	109648836	chr8:109574181-109648836	1	-	109574905	109644659	789624	8	1832,150,204,103,198,202,81,149,	0,3686,5617,11878,44660,68546,70454,74506,
#Partially deleted in new
chr8	109574181	109648836	chr8:109574181-109648836	1	-	109574905	109618911	789624	6	1832,150,204,103,198,149,	0,3686,5617,11878,44660,74506,
#Partially deleted in new
chr8	109574185	109644817	chr8:109574185-109644817	1	-	109574905	109644659	789624	7	1828,150,204,103,198,205,182,	0,3682,5613,11874,44656,68542,70450,
#Partially deleted in new
chr8	109574185	109645517	chr8:109574185-109645517	1	-	109574905	109644659	789624	8	1828,150,204,103,198,202,81,229,	0,3682,5613,11874,44656,68542,70450,71103,
#Partially deleted in new
chr8	109574185	109580537	chr8:109574185-109580537	1	-	109574905	109579914	789624	3	1828,150,739,	0,3682,5613,
#Partially deleted in new
chr8	109574187	109681005	chr8:109574187-109681005	1	-	109574905	109618911	789624	6	1826,150,204,103,198,295,	0,3680,5611,11872,44654,106523,
#Partially deleted in new
chr8	109574187	109648903	chr8:109574187-109648903	1	-	109574905	109644659	789624	8	1826,150,204,103,198,205,81,216,	0,3680,5611,11872,44654,68540,70448,74500,
#Partially deleted in new
chr8	109574187	109691791	chr8:109574187-109691791	1	-	109574905	109644659	789624	8	1826,150,204,103,198,205,81,459,	0,3680,5611,11872,44654,68540,70448,117145,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	109574187	109648903	chr8:109574187-109648903	1	-	109574905	109644659	789624	9	1826,150,204,103,198,205,81,121,216,	0,3680,5611,11872,44654,68540,70448,71696,74500,
#Partially deleted in new
chr8	109574187	109645593	chr8:109574187-109645593	1	-	109574905	109644659	789624	8	1826,150,204,103,198,205,81,305,	0,3680,5611,11872,44654,68540,70448,71101,
#Partially deleted in new
chr8	109574205	109644817	chr8:109574205-109644817	1	-	109574905	109618911	789624	6	1808,150,204,103,198,182,	0,3662,5593,11854,44636,70430,
#Partially deleted in new
chr8	109574652	109608075	chr8:109574652-109608075	1	-	109574905	109607947	789624	5	1361,150,204,103,165,	0,3215,5146,11407,33258,
#Partially deleted in new
chr8	109574751	109681005	chr8:109574751-109681005	1	-	109574905	109644659	789624	8	1262,150,204,103,198,205,81,295,	0,3116,5047,11308,44090,67976,69884,105959,
#Partially deleted in new
chr8	109575974	109581058	chr8:109575974-109581058	0	-	109575974	109575974	8553170	4	39,150,204,180,	0,1893,3824,4904,
#Partially deleted in new
chr8	109575974	109603454	chr8:109575974-109603454	0	-	109575974	109586100	789624	5	39,150,204,103,98,	0,1893,3824,10085,27382,
#Partially deleted in new
chr8	109577895	109608000	chr8:109577895-109608000	0	-	109586055	109607947	789624	4	122,204,146,90,	0,1903,8121,30015,
#Partially deleted in new
chr8	109579798	109648746	chr8:109579798-109648746	0	-	109579798	109618911	789624	4	204,103,198,59,	0,6261,39043,68889,
#Partially deleted in new
chr8	109579808	109680874	chr8:109579808-109680874	0	-	109579808	109579808	8553170	3	194,198,164,	0,39033,100902,
#Partially deleted in new
chr8	109579911	109586529	chr8:109579911-109586529	0	-	109579911	109579911	8553170	2	91,470,	0,6148,
#Partially deleted in new
chr8	109579917	109691789	chr8:109579917-109691789	0	-	109579917	109644659	789624	6	85,103,198,202,81,457,	0,6142,38924,62810,64718,111415,
#Partially deleted in new
chr8	109579935	109643426	chr8:109579935-109643426	0	-	109579935	109618911	789624	4	67,103,198,190,	0,6124,38906,63301,
#Partially deleted in new
chr8	109579935	109680915	chr8:109579935-109680915	0	-	109579935	109618911	789624	4	67,103,198,205,	0,6124,38906,100775,
#Partially deleted in new
chr8	109585721	109607999	chr8:109585721-109607999	0	-	109585721	109585721	8553170	2	441,89,	0,22189,
#Partially deleted in new
chr8	109586098	109680219	chr8:109586098-109680219	0	-	109586098	109644659	789624	5	64,198,202,81,30,	0,32743,56629,58537,94091,
#Partially deleted in new
chr8	109586126	109645518	chr8:109586126-109645518	0	-	109586126	109618911	789624	4	36,198,81,230,	0,32715,58509,59162,
#Partially deleted in new
chr8	109586129	109680914	chr8:109586129-109680914	0	-	109586129	109618911	789624	4	33,198,81,204,	0,32712,58506,94581,
#Partially deleted in new
chr8	109586134	109645389	chr8:109586134-109645389	0	-	109586134	109644659	789624	5	28,198,205,81,101,	0,32707,56593,58501,59154,
#Partially deleted in new
chr8	109618810	109644779	chr8:109618810-109644779	0	-	109618810	109618810	8553170	3	229,205,144,	0,23917,25825,
#Partially deleted in new
chr8	109618856	109648966	chr8:109618856-109648966	0	-	109618856	109644659	789624	4	183,205,81,279,	0,23871,25779,29831,
#Partially deleted in new
chr8	109618954	109680924	chr8:109618954-109680924	0	-	109618954	109644659	789624	4	85,202,81,214,	0,23773,25681,61756,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	109618983	109680812	chr8:109618983-109680812	0	-	109618983	109644659	789624	5	56,205,81,121,102,	0,23744,25652,26900,61727,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	109642727	109648862	chr8:109642727-109648862	0	-	109642727	109644659	789624	4	205,81,121,175,	0,1908,3156,5960,
#Partially deleted in new
chr8	109642727	109691605	chr8:109642727-109691605	0	-	109642727	109644659	789624	3	205,81,273,	0,1908,48605,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	109642735	109680828	chr8:109642735-109680828	0	-	109642735	109644659	789624	4	197,123,121,118,	0,1900,3148,37975,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	109644114	109648084	chr8:109644114-109648084	3	+	109644114	109644114	8553170	2	108,2967,	0,1003,
#Partially deleted in new
chr8	109777911	109782288	chr8:109777911-109782288	7	+	109777911	109777911	16724991	2	2120,858,	0,3519,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	109873912	109874018	chr8:109873912-109874018	3	-	109873912	109873912	8553170	1	106,	0,
#Deleted in new
chr8	109899245	109899762	chr8:109899245-109899762	7	-	109899245	109899245	16724991	1	517,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	109963644	109975847	chr8:109963644-109975847	3	-	109968087	109974388	789624	4	4955,530,1265,229,	0,8613,10283,11974,
#Partially deleted in new
chr8	109967005	109974730	chr8:109967005-109974730	1	-	109968087	109974388	789624	3	1594,530,803,	0,5252,6922,
#Deleted in new
chr8	109973942	109974781	chr8:109973942-109974781	3	+	109973942	109973942	8553170	2	83,470,	0,369,
#Deleted in new
chr8	110105075	110105964	chr8:110105075-110105964	7	-	110105075	110105075	16724991	1	889,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	110334742	110349607	chr8:110334742-110349607	3	-	110334742	110334742	8553170	3	567,143,63,	0,9710,14802,
#Deleted in new
chr8	110555407	110556518	chr8:110555407-110556518	7	+	110555407	110555407	16724991	1	1111,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	110609240	110632394	chr8:110609240-110632394	3	+	110609240	110609240	8553170	3	66,92,44,	0,18125,23110,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	110766862	110772759	chr8:110766862-110772759	3	+	110766862	110766862	8553170	2	54,422,	0,5475,
#Deleted in new
chr8	110809393	110809894	chr8:110809393-110809894	7	-	110809393	110809393	16724991	1	501,	0,
#Deleted in new
chr8	110933262	110934533	chr8:110933262-110934533	7	-	110933262	110933262	16724991	1	1271,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	110937689	111027433	chr8:110937689-111027433	3	-	110937689	110937689	789624	6	38,37,109,120,129,128,	0,65724,66971,67840,77214,89616,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	110982949	111027392	chr8:110982949-111027392	1	-	110982949	110982949	789624	5	191,37,109,120,87,	0,20464,21711,22580,44356,
#Partially deleted in new
chr8	111098960	111236171	chr8:111098960-111236171	3	-	111098960	111098960	789624	4	179,89,66,90,	0,14471,17574,137121,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	111183291	111236203	chr8:111183291-111236203	1	-	111183291	111183291	8553170	2	444,122,	0,52790,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	111225584	111227049	chr8:111225584-111227049	7	+	111225584	111225584	16724991	2	630,85,	0,1380,
#Partially deleted in new
chr8	111376638	111470617	chr8:111376638-111470617	0	+	111376638	111376638	8553170	4	52,65,123,237,	0,11039,89539,93742,
#Partially deleted in new
chr8	111376662	111515336	chr8:111376662-111515336	1	+	111376662	111376662	8553170	5	48,220,123,89,325,	0,3810,89515,136384,138349,
#Deleted in new
chr8	111380602	111380868	chr8:111380602-111380868	7	+	111380602	111380602	16724991	1	266,	0,
#Partially deleted in new
chr8	111416514	111756826	chr8:111416514-111756826	1	+	111416514	111416514	8553170	8	28,123,89,175,66,57,166,317,	0,49663,96532,125534,126404,200714,328927,339995,
#Deleted in new
chr8	111621457	111621797	chr8:111621457-111621797	7	-	111621457	111621457	16724991	1	340,	0,
#Partially deleted in new
chr8	111741974	111756822	chr8:111741974-111756822	3	+	111741974	111741974	8553170	4	109,166,149,517,	0,3467,12422,14331,
#Partially deleted in new
chr8	111742011	111756632	chr8:111742011-111756632	0	+	111742011	111742011	8553170	4	72,166,95,123,	0,3430,14294,14498,
#Partially deleted in new
chr8	111745517	111756826	chr8:111745517-111756826	0	+	111745517	111745517	8553170	2	90,317,	0,10992,
#Partially deleted in new
chr8	112148741	112148825	chr8:112148741-112148825	3	-	112148741	112148741	8553170	1	84,	0,
#Partially deleted in new
chr8	112222927	113437099	chr8:112222927-113437099	3	-	112224770	113436854	789624	71	2003,136,88,113,159,66,180,112,74,174,174,180,177,183,174,186,174,174,174,195,186,189,147,189,114,81,146,178,189,210,117,70,119,105,97,125,204,96,114,117,195,188,139,192,203,127,192,157,170,189,216,117,189,188,139,195,327,183,113,104,122,125,88,78,312,113,208,195,113,223,423,	0,5828,8617,11437,14262,18792,21466,24092,31325,32326,40711,42483,58246,64136,66437,68582,69609,72905,78865,81793,83079,88050,90978,91501,95909,96973,112401,113724,114615,118549,123169,128247,129488,157424,160639,167736,183596,185390,185991,249663,269561,280862,283763,294106,327743,329666,333835,350573,364138,413889,415768,422181,427233,433226,443349,459514,462478,466940,577234,606758,636217,698699,724862,731756,752909,796139,875828,950794,1055664,1091643,1213749,
#Partially deleted in new
chr8	112222927	113377153	chr8:112222927-113377153	1	-	112224770	113376795	789624	72	2003,136,88,113,159,66,180,112,74,174,174,180,177,183,174,186,174,174,174,195,186,189,147,189,114,81,146,178,189,210,117,70,119,105,97,125,204,96,114,117,195,188,139,192,203,127,192,157,170,189,216,117,189,188,139,195,327,183,113,104,122,125,88,78,312,113,208,195,113,223,148,81,	0,5828,8617,11437,14262,18792,21466,24092,31325,32326,40711,42483,58246,64136,66437,68582,69609,72905,78865,81793,83079,88050,90978,91501,95909,96973,112401,113724,114615,118549,123169,128247,129488,157424,160639,167736,183596,185390,185991,249663,269561,280862,283763,294106,327743,329666,333835,350573,364138,413889,415768,422181,427233,433226,443349,459514,462478,466940,577234,606758,636217,698699,724862,731756,752909,796139,875828,950794,1055664,1091643,1153810,1154145,
#Partially deleted in new
chr8	112222931	112690042	chr8:112222931-112690042	0	-	112224770	112690042	789624	56	1999,136,88,113,159,66,180,112,74,174,174,180,177,183,174,186,174,174,174,195,186,189,147,189,114,81,146,178,189,210,117,70,119,105,97,125,204,117,195,188,139,192,203,127,192,157,170,189,216,117,189,188,139,195,327,175,	0,5824,8613,11433,14258,18788,21462,24088,31321,32322,40707,42479,58242,64132,66433,68578,69605,72901,78861,81789,83075,88046,90974,91497,95905,96969,112397,113720,114611,118545,123165,128243,129484,157420,160635,167732,183592,249659,269557,280858,283759,294102,327739,329662,333831,350569,364134,413885,415764,422177,427229,433222,443345,459510,462474,466936,
#Partially deleted in new
chr8	112222931	113436883	chr8:112222931-113436883	1	-	112224770	113436854	789624	69	1999,136,88,113,159,66,180,112,74,174,174,180,177,183,174,186,174,174,174,186,189,147,189,114,81,146,178,189,210,117,70,119,105,97,125,204,96,114,117,195,188,139,192,203,127,192,157,170,189,216,117,189,188,139,195,327,183,113,104,122,125,88,78,113,208,195,113,223,207,	0,5824,8613,11433,14258,18788,21462,24088,31321,32322,40707,42479,58242,64132,66433,68578,69605,72901,78861,83075,88046,90974,91497,95905,96969,112397,113720,114611,118545,123165,128243,129484,157420,160635,167732,183592,185386,185987,249659,269557,280858,283759,294102,327739,329662,333831,350569,364134,413885,415764,422177,427229,433222,443345,459510,462474,466936,577230,606754,636213,698695,724858,731752,796135,875824,950790,1055660,1091639,1213745,
#Partially deleted in new
chr8	112224047	112255928	chr8:112224047-112255928	0	-	112224047	112224047	8553170	10	883,136,88,113,159,66,180,112,74,675,	0,4708,7497,10317,13142,17672,20346,22972,30205,31206,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	112310224	112337575	chr8:112310224-112337575	0	-	112310224	112310224	8553170	8	942,147,189,114,81,146,178,33,	0,3681,4204,8612,9676,25104,26427,27318,
#Partially deleted in new
chr8	112538888	112539317	chr8:112538888-112539317	7	+	112538888	112538888	16724991	1	429,	0,
#Deleted in new
chr8	112643492	112643583	chr8:112643492-112643583	3	+	112643492	112643492	5263520	1	91,	0,
#Partially deleted in new
chr8	113018775	113436939	chr8:113018775-113436939	0	-	113018775	113018775	8553170	6	404,208,195,113,223,263,	0,79980,154946,259816,295795,417901,
#Partially deleted in new
chr8	113098524	113173820	chr8:113098524-113173820	0	-	113098524	113098524	8553170	3	145,208,99,	0,231,75197,
#Partially deleted in new
chr8	113098685	113173900	chr8:113098685-113173900	0	-	113098685	113098685	8553170	2	278,179,	0,75036,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	113309204	113436790	chr8:113309204-113436790	0	-	113309204	113309204	8553170	2	5589,114,	0,127472,
#Deleted in new
chr8	113376668	113377227	chr8:113376668-113377227	7	+	113376668	113376668	16724991	2	358,163,	0,396,
#Partially deleted in new
chr8	113600309	113616958	chr8:113600309-113616958	3	+	113600309	113600309	8553170	2	129,1455,	0,15194,
#Deleted in new
chr8	113615503	113616958	chr8:113615503-113616958	0	+	113615503	113615503	8553170	2	185,375,	0,1080,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	113950885	113950998	chr8:113950885-113950998	3	+	113950885	113950885	8553170	1	113,	0,
#Deleted in new
chr8	114318399	114318911	chr8:114318399-114318911	7	-	114318399	114318399	16724991	1	512,	0,
#Deleted in new
chr8	114791652	114791929	chr8:114791652-114791929	7	-	114791652	114791652	16724991	1	277,	0,
#Partially deleted in new
chr8	115408495	115669001	chr8:115408495-115669001	3	-	115414022	115623637	789624	7	6589,123,604,1130,929,158,457,	0,9834,178505,195377,210636,215105,260049,
#Partially deleted in new
chr8	115408495	115668012	chr8:115408495-115668012	1	-	115414022	115620058	789624	6	6589,123,604,1130,929,139,	0,9834,178505,195377,210636,259378,
#Partially deleted in new
chr8	115412548	115668702	chr8:115412548-115668702	1	-	115414022	115620058	789624	6	2536,123,604,1130,929,158,	0,5781,174452,191324,206583,255996,
#Partially deleted in new
chr8	115413813	115620070	chr8:115413813-115620070	1	-	115414022	115620058	789624	7	1271,123,604,178,352,578,223,	0,4516,173187,190059,190837,205318,206034,
#Partially deleted in new
chr8	115413921	115668007	chr8:115413921-115668007	1	-	115414022	115667883	789624	6	1163,123,604,1130,929,134,	0,4408,173079,189951,205210,253952,
#Partially deleted in new
chr8	115414428	115492221	chr8:115414428-115492221	0	-	115414428	115492221	789624	3	656,123,34,	0,3901,77759,
#Deleted in new
chr8	115509601	115511325	chr8:115509601-115511325	3	+	115509601	115509601	8553170	2	125,277,	0,1447,
#Partially deleted in new
chr8	115515189	115668903	chr8:115515189-115668903	1	-	115515235	115620058	789624	5	94,604,1130,929,359,	0,71811,88683,103942,153355,
#Partially deleted in new
chr8	115587000	115667981	chr8:115587000-115667981	0	-	115587000	115667883	789624	5	604,178,352,929,108,	0,16872,17650,32131,80873,
#Partially deleted in new
chr8	115619746	115661678	chr8:115619746-115661678	0	-	115619746	115623637	789624	3	314,158,109,	0,3854,41823,
#Partially deleted in new
chr8	115619773	115669483	chr8:115619773-115669483	0	-	115619773	115623637	789624	3	287,158,139,	0,3827,49571,
#Partially deleted in new
chr8	115619912	115809673	chr8:115619912-115809673	0	-	115619912	115623637	789624	5	148,158,97,137,41,	0,3688,17321,81023,189720,
#Partially deleted in new
chr8	115623610	115668294	chr8:115623610-115668294	0	-	115623610	115623637	789624	2	148,421,	0,44263,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	116022685	116022779	chr8:116022685-116022779	7	-	116022685	116022685	16724991	1	94,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	116402542	116403757	chr8:116402542-116403757	3	-	116402542	116402542	8553170	2	442,113,	0,1102,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	116642129	116755821	chr8:116642129-116755821	3	-	116645005	116755797	0	8	2974,133,121,150,100,168,157,156,	0,4341,6676,13726,15085,16683,83886,113536,
#Partially deleted in new
chr8	116644816	116755823	chr8:116644816-116755823	1	-	116645005	116755797	789624	9	287,133,121,150,100,168,145,3,158,	0,1654,3989,11039,12398,13996,81199,92896,110849,
#Partially deleted in new
chr8	116644832	116766255	chr8:116644832-116766255	1	-	116645005	116755993	789624	10	271,133,121,150,100,168,157,132,68,741,	0,1638,3973,11023,12382,13980,81183,110833,111119,120682,
#Partially deleted in new
chr8	116646580	116657775	chr8:116646580-116657775	0	-	116646580	116646580	8553170	4	23,121,150,561,	0,2225,9275,10634,
#Partially deleted in new
chr8	116648805	116755784	chr8:116648805-116755784	0	-	116648805	116755673	789624	6	121,150,100,168,185,119,	0,7050,8409,10007,48247,106860,
#Partially deleted in new
chr8	116655904	116755822	chr8:116655904-116755822	0	-	116655904	116755797	789624	6	101,100,168,157,48,157,	0,1310,2908,70111,78372,99761,
#Partially deleted in new
chr8	116657219	116755829	chr8:116657219-116755829	0	-	116737248	116755797	789624	5	95,168,157,51,164,	0,1593,68796,80017,98446,
#Partially deleted in new
chr8	116658248	116755823	chr8:116658248-116755823	0	-	116658248	116658248	8553170	3	732,157,158,	0,67767,97417,
#Partially deleted in new
chr8	116658544	116755823	chr8:116658544-116755823	0	-	116658544	116658544	8553170	2	436,158,	0,97121,
#Partially deleted in new
chr8	116658831	116755805	chr8:116658831-116755805	0	-	116658831	116755797	789624	4	149,72,157,140,	0,30237,67184,96834,
#Partially deleted in new
chr8	116658885	116755823	chr8:116658885-116755823	0	-	116734345	116755797	789624	4	95,157,78,158,	0,67130,75391,96780,
#Partially deleted in new
chr8	116726054	116766925	chr8:116726054-116766925	0	-	116726054	116755993	789624	4	118,132,68,244,	0,29611,29897,40627,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	116766502	116774690	chr8:116766502-116774690	3	+	116766603	116771842	789624	3	289,175,3235,	0,3689,4953,
#Partially deleted in new
chr8	116766504	116849286	chr8:116766504-116849286	0	+	116766603	116786557	789624	3	287,147,399,	0,19998,82383,
#Partially deleted in new
chr8	116766507	116779586	chr8:116766507-116779586	0	+	116766603	116779586	789624	3	284,175,104,	0,3684,12975,
#Partially deleted in new
chr8	116766508	116786798	chr8:116766508-116786798	0	+	116766603	116779504	789624	3	283,104,296,	0,12974,19994,
#Partially deleted in new
chr8	116766555	116770849	chr8:116766555-116770849	0	+	116766555	116766555	8553170	2	236,658,	0,3636,
#Partially deleted in new
chr8	116766571	116849463	chr8:116766571-116849463	1	+	116766603	116849017	789624	2	220,576,	0,82316,
#Deleted in new
chr8	116770097	116771783	chr8:116770097-116771783	0	+	116770097	116770097	8553170	2	269,328,	0,1358,
#Partially deleted in new
chr8	116770189	116849079	chr8:116770189-116849079	1	+	116770321	116849037	789624	2	177,192,	0,78698,
#Partially deleted in new
chr8	116770189	116849079	chr8:116770189-116849079	0	+	116770321	116786557	789624	4	177,104,147,192,	0,9293,16313,78698,
#Partially deleted in new
chr8	116845934	116874866	chr8:116845934-116874866	3	-	116847499	116866729	0	14	1757,84,150,149,160,224,123,126,207,107,100,130,176,256,	0,3011,4683,6013,6614,8310,10231,10711,11332,12417,15906,17195,20651,28676,
#Partially deleted in new
chr8	116846904	116852252	chr8:116846904-116852252	1	-	116847499	116850749	789624	3	787,84,1635,	0,2041,3713,
#Partially deleted in new
chr8	116847226	116849483	chr8:116847226-116849483	1	-	116847499	116848963	789624	2	465,538,	0,1719,
#Partially deleted in new
chr8	116847333	116852251	chr8:116847333-116852251	1	-	116847499	116852052	789624	4	358,84,150,304,	0,1612,3284,4614,
#Partially deleted in new
chr8	116857270	116874424	chr8:116857270-116874424	0	-	116857270	116866729	789624	6	203,107,100,130,176,115,	0,1081,4570,5859,9315,17039,
#Partially deleted in new
chr8	116857278	116874528	chr8:116857278-116874528	0	-	116857278	116866729	789624	6	195,107,100,130,176,166,	0,1073,4562,5851,9307,17084,
#Partially deleted in new
chr8	116857288	116874328	chr8:116857288-116874328	0	-	116857288	116857288	8553170	6	185,107,100,130,176,210,	0,1063,4552,5841,9297,16830,
#Partially deleted in new
chr8	116861842	116874360	chr8:116861842-116874360	0	-	116861842	116866729	789624	4	98,130,176,111,	0,1287,4743,12407,
#Partially deleted in new
chr8	116861853	116874360	chr8:116861853-116874360	0	-	116861853	116866729	789624	4	87,130,176,155,	0,1276,4732,12352,
#Partially deleted in new
chr8	116863116	116866991	chr8:116863116-116866991	0	-	116863116	116863116	8553170	2	143,406,	0,3469,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	116874423	116876868	chr8:116874423-116876868	3	+	116874423	116874423	789624	2	562,1448,	0,997,
#Partially deleted in new
chr8	116874727	116874800	chr8:116874727-116874800	3	-	116874727	116874727	5263520	1	73,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	116938198	116944487	chr8:116938198-116944487	3	+	116938243	116942701	789624	2	369,1930,	0,4359,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	116938545	116942922	chr8:116938545-116942922	0	+	116938545	116938545	8553170	2	135,365,	0,4012,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	116950272	117172791	chr8:116950272-117172791	1	+	117147029	117172681	789624	10	113,101,30,200,147,154,151,106,135,256,	0,746,196546,196681,202671,207418,211465,213152,220761,222263,
#Partially deleted in new
chr8	116950489	117153082	chr8:116950489-117153082	2	+	117147029	117153082	789624	5	79,101,30,200,139,	0,529,196329,196464,202454,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	116950948	117147011	chr8:116950948-117147011	0	+	116950948	116950948	8553170	5	171,123,167,30,58,	0,56042,184283,195870,196005,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr8	116950950	117176714	chr8:116950950-117176714	1	+	117147029	117172681	789624	11	169,40,119,30,200,147,154,151,106,135,4179,	0,88268,184329,195868,196003,201993,206740,210787,212474,220083,221585,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	117017945	117018248	chr8:117017945-117018248	3	+	117017945	117017945	8553170	1	303,	0,
#Partially deleted in new
chr8	117055817	117056145	chr8:117055817-117056145	7	+	117055817	117055817	16724991	1	328,	0,
#Deleted in new
chr8	117128454	117130299	chr8:117128454-117130299	3	+	117128454	117128454	8553170	2	108,389,	0,1456,
#Partially deleted in new
chr8	117134807	117152975	chr8:117134807-117152975	0	+	117147029	117152975	789624	3	591,200,32,	0,12146,18136,
#Partially deleted in new
chr8	117135026	117147138	chr8:117135026-117147138	0	+	117147029	117147138	789624	3	372,30,185,	0,11792,11927,
#Partially deleted in new
chr8	117135073	117147609	chr8:117135073-117147609	0	+	117135073	117135073	8553170	3	325,200,60,	0,11880,12476,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	117135258	117176714	chr8:117135258-117176714	1	+	117147029	117172681	789624	9	140,30,200,147,154,151,106,135,4179,	0,11560,11695,17685,22432,26479,28166,35775,37277,
#Partially deleted in new
chr8	117135327	117174091	chr8:117135327-117174091	1	+	117135327	117172681	789624	8	71,200,147,154,151,106,135,1556,	0,11626,17616,22363,26410,28097,35706,37208,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	117163967	117164255	chr8:117163967-117164255	3	+	117163967	117163967	8553170	1	288,	0,
#Deleted in new
chr8	117313527	117313661	chr8:117313527-117313661	3	+	117313527	117313527	8553170	1	134,	0,
#Partially deleted in new
chr8	117520712	117540262	chr8:117520712-117540262	3	+	117520876	117539978	789624	4	341,159,105,380,	0,7938,10010,19170,
#Partially deleted in new
chr8	117520763	117528905	chr8:117520763-117528905	0	+	117520763	117520763	8553170	2	290,255,	0,7887,
#Partially deleted in new
chr8	117520832	117539978	chr8:117520832-117539978	1	+	117520876	117539978	789624	3	221,159,96,	0,7818,19050,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	117523270	117524061	chr8:117523270-117524061	7	-	117523270	117523270	16724991	2	435,61,	0,730,
#Partially deleted in new
chr8	117530363	117540002	chr8:117530363-117540002	0	+	117530363	117530363	8553170	2	464,120,	0,9519,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr8	117794489	118111853	chr8:117794489-118111853	3	-	117799711	118111046	789624	11	5408,172,161,90,96,119,133,120,108,94,1769,	0,10232,12727,18382,23945,25186,27975,35740,40954,42618,315595,
#Partially deleted in new
chr8	117799819	118111342	chr8:117799819-118111342	0	-	117835498	118111046	789624	10	78,172,161,90,96,119,133,120,108,369,	0,4902,7397,13052,18615,19856,22645,30410,35624,311154,
#Partially deleted in new
chr8	117822464	118110414	chr8:117822464-118110414	0	-	117830314	118110414	789624	6	133,120,55,108,94,330,	0,7765,9134,12979,14643,287620,
#Partially deleted in new
chr8	118189454	118621914	chr8:118189454-118621914	1	-	118197709	118621816	789624	5	8278,141,100,179,111,	0,190105,250407,391260,432349,
#Partially deleted in new
chr8	118197305	118439861	chr8:118197305-118439861	0	-	118197305	118197305	8553170	5	427,261,119,141,30,	0,42409,43846,182254,242526,
#Partially deleted in new
chr8	118197546	118621949	chr8:118197546-118621949	3	-	118197709	118621816	789624	5	186,141,130,179,146,	0,182013,242285,383168,424257,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	118215821	118621893	chr8:118215821-118621893	0	-	118379685	118621816	789624	5	788,261,141,179,90,	0,23893,163738,364893,405982,
#Partially deleted in new
chr8	118261949	118621938	chr8:118261949-118621938	0	-	118261949	118261949	8553170	5	325,141,130,179,135,	0,117610,177882,318765,359854,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	118282138	118295693	chr8:118282138-118295693	0	+	118282138	118282138	8553170	5	22,150,78,134,19,	0,2133,6100,9074,13536,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	118282146	118353148	chr8:118282146-118353148	3	+	118282146	118282146	8553170	5	184,150,78,134,1270,	0,2125,6092,9066,69732,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	118282241	118284963	chr8:118282241-118284963	0	+	118282241	118282241	8553170	2	89,692,	0,2030,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	118282260	118288356	chr8:118282260-118288356	0	+	118282260	118282260	8553170	4	70,150,73,118,	0,2011,2253,5978,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	118284295	118295694	chr8:118284295-118295694	0	+	118284295	118284295	8553170	5	126,73,78,134,20,	0,218,3943,6917,11379,
#Partially deleted in new
chr8	118291207	118400605	chr8:118291207-118400605	1	+	118291207	118291207	8553170	3	139,208,329,	0,103577,109069,
#Partially deleted in new
chr8	118327673	118621975	chr8:118327673-118621975	0	-	118327673	118327673	8553170	5	293,141,130,179,37,	0,51886,112158,253041,294265,
#Partially deleted in new
chr8	118375700	118622112	chr8:118375700-118622112	0	-	118375700	118375700	8553170	5	156,141,130,179,174,	0,3859,64131,205014,246238,
#Partially deleted in new
chr8	118377987	118621953	chr8:118377987-118621953	1	-	118379416	118621816	789624	4	1713,130,179,150,	0,61844,202727,243816,
#Partially deleted in new
chr8	118427985	118621967	chr8:118427985-118621967	0	-	118427985	118427985	8553170	4	406,130,179,164,	0,11846,152729,193818,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	118488381	118621924	chr8:118488381-118621924	0	-	118488381	118488381	8553170	4	2332,89,179,121,	0,4534,92333,133422,
#Partially deleted in new
chr8	118621000	118764285	chr8:118621000-118764285	3	+	118621000	118621000	789624	6	186,121,152,110,132,17,	0,534,47449,103518,104935,143268,
#Partially deleted in new
chr8	118621554	118858218	chr8:118621554-118858218	0	+	118621554	118621554	8553170	5	101,152,110,132,162,	0,46895,102964,104381,236502,
#Deleted in new
chr8	118761855	118762201	chr8:118761855-118762201	7	-	118761855	118761855	16724991	1	346,	0,
#Partially deleted in new
chr8	118923556	118952200	chr8:118923556-118952200	3	-	118924373	118951821	0	5	1206,225,192,370,409,	0,2937,5181,9374,28235,
#Partially deleted in new
chr8	118924474	118929073	chr8:118924474-118929073	0	-	118924474	118924474	8553170	3	288,225,336,	0,2019,4263,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	118926509	118951883	chr8:118926509-118951883	0	-	118930730	118951821	789624	5	209,192,281,370,92,	0,2228,3978,6421,25282,
#Partially deleted in new
chr8	118982578	118982875	chr8:118982578-118982875	7	-	118982578	118982578	16724991	1	297,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	118995451	119103867	chr8:118995451-119103867	0	+	118995451	118995451	8553170	7	122,113,72,72,54,169,68,	0,13989,94228,95697,106896,107074,108348,
#Partially deleted in new
chr8	119062941	119068782	chr8:119062941-119068782	3	-	119062941	119062941	789624	2	299,1109,	0,4732,
#Partially deleted in new
chr8	119067240	119106582	chr8:119067240-119106582	3	+	119067281	119106191	789624	6	189,72,72,54,96,783,	0,22439,23908,35107,36559,38559,
#Partially deleted in new
chr8	119207948	119243522	chr8:119207948-119243522	1	+	119221658	119243488	789624	4	145,171,156,106,	0,13638,32216,35468,
#Partially deleted in new
chr8	119208370	119245673	chr8:119208370-119245673	3	+	119208472	119243488	789624	4	234,171,156,2257,	0,13216,31794,35046,
#Partially deleted in new
chr8	119208867	119243648	chr8:119208867-119243648	1	+	119221658	119243488	789624	4	333,171,156,232,	0,12719,31297,34549,
#Partially deleted in new
chr8	119215110	119246836	chr8:119215110-119246836	1	-	119215110	119215110	8553170	2	449,107,	0,31619,
#Partially deleted in new
chr8	119215171	119246843	chr8:119215171-119246843	0	-	119215171	119215171	8553170	2	456,114,	0,31558,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	119215537	119246848	chr8:119215537-119246848	3	-	119215537	119215537	8553170	6	90,165,104,36,33,119,	0,5705,7746,28757,29272,31192,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	119221093	119246815	chr8:119221093-119246815	1	-	119221093	119221093	8553170	5	314,104,63,36,86,	0,2190,3156,23201,25636,
#Partially deleted in new
chr8	119223803	119246843	chr8:119223803-119246843	1	-	119223803	119223803	8553170	5	196,63,36,166,114,	0,446,20491,21006,22926,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	119325170	119325265	chr8:119325170-119325265	3	+	119325170	119325170	5263520	1	95,	0,
#Deleted in new
chr8	119388347	119388469	chr8:119388347-119388469	3	+	119388347	119388347	8553170	1	122,	0,
#Partially deleted in new
chr8	119416305	119424353	chr8:119416305-119424353	3	+	119416532	119423132	789624	5	311,226,252,215,1518,	0,438,1752,2825,6530,
#Deleted in new
chr8	119416449	119417120	chr8:119416449-119417120	0	+	119416449	119416449	8553170	2	167,377,	0,294,
#Deleted in new
chr8	119480278	119480775	chr8:119480278-119480775	7	-	119480278	119480278	16724991	1	497,	0,
#Partially deleted in new
chr8	119557085	119638830	chr8:119557085-119638830	3	-	119557520	119638780	0	26	606,157,133,78,136,137,52,185,88,88,128,32,126,109,156,73,66,56,120,80,98,61,126,156,103,83,	0,5771,7737,11089,12149,13619,23030,25332,26631,26876,29100,29958,33419,36666,38761,43592,44311,50836,59179,60078,60380,62158,64308,69479,81339,81662,
#Partially deleted in new
chr8	119557085	119673453	chr8:119557085-119673453	1	-	119557520	119673272	789624	26	606,157,133,78,136,137,75,52,185,88,88,128,32,126,109,73,66,56,120,80,98,61,126,156,103,202,	0,5771,7737,11089,12149,13619,15090,23030,25332,26631,26876,29100,29958,33419,36666,43592,44311,50836,59179,60078,60380,62158,64308,69479,81339,116166,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	119557086	119581107	chr8:119557086-119581107	0	-	119557086	119557086	8553170	7	605,157,133,78,136,1546,992,	0,5770,7736,11088,12148,13618,23029,
#Partially deleted in new
chr8	119557408	119593008	chr8:119557408-119593008	1	-	119557520	119590628	789624	14	283,157,133,78,136,137,52,173,88,88,128,32,126,84,	0,5448,7414,10766,11826,13296,22707,25021,26308,26553,28777,29635,33096,35516,
#Partially deleted in new
chr8	119557520	119638839	chr8:119557520-119638839	1	-	119557520	119638780	0	25	171,157,133,78,136,137,52,185,88,88,128,32,126,109,73,66,56,120,80,98,61,126,156,103,92,	0,5336,7302,10654,11714,13184,22595,24897,26196,26441,28665,29523,32984,36231,43157,43876,50401,58744,59643,59945,61723,63873,69044,80904,81227,
#Partially deleted in new
chr8	119557520	119638780	chr8:119557520-119638780	1	-	119557520	119638780	0	26	171,157,133,78,136,137,75,52,185,88,88,128,32,126,109,73,66,56,120,80,98,61,126,156,103,33,	0,5336,7302,10654,11714,13184,14655,22595,24897,26196,26441,28665,29523,32984,36231,43157,43876,50401,58744,59643,59945,61723,63873,69044,80904,81227,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	119572619	119578485	chr8:119572619-119578485	0	-	119572619	119572619	8553170	2	528,138,	0,5728,
#Partially deleted in new
chr8	119616252	119638814	chr8:119616252-119638814	0	-	119616252	119638780	789624	8	132,80,98,61,126,102,103,67,	0,911,1213,2991,5141,10366,22172,22495,
#Partially deleted in new
chr8	119616268	119638824	chr8:119616268-119638824	0	-	119618313	119638780	789624	9	116,80,98,174,61,126,156,103,77,	0,895,1197,1881,2975,5125,10296,22156,22479,
#Deleted in new
chr8	119618161	119618474	chr8:119618161-119618474	7	-	119618161	119618161	16724991	1	313,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	119711829	119712145	chr8:119711829-119712145	3	-	119711829	119711829	8553170	1	316,	0,
#Partially deleted in new
chr8	119730774	119832863	chr8:119730774-119832863	3	-	119731923	119832564	0	26	1412,123,106,230,110,70,140,194,111,141,253,66,110,115,155,136,86,100,114,185,232,142,119,161,55,382,	0,11759,13513,15930,25231,27298,29824,31640,47244,50278,52606,54426,57563,58015,58817,60549,62591,64757,66215,66887,71019,73103,75508,88571,100902,101707,
#Partially deleted in new
chr8	119731814	119760668	chr8:119731814-119760668	0	-	119731923	119760668	789624	8	372,123,106,156,230,110,70,70,	0,10719,12473,13066,14890,24191,26258,28784,
#Partially deleted in new
chr8	119732061	119744586	chr8:119732061-119744586	0	-	119732061	119732061	8553170	3	125,123,299,	0,10472,12226,
#Partially deleted in new
chr8	119746865	119767128	chr8:119746865-119767128	0	-	119746865	119746865	8553170	6	69,110,70,140,194,126,	0,9140,11207,13733,15549,20137,
#Partially deleted in new
chr8	119756055	119762908	chr8:119756055-119762908	0	-	119756055	119756055	8553170	4	60,70,140,494,	0,2017,4543,6359,
#Partially deleted in new
chr8	119788353	119797830	chr8:119788353-119797830	0	-	119788353	119797830	789624	7	94,115,155,136,86,100,169,	0,436,1238,2970,5012,7178,9308,
#Partially deleted in new
chr8	119789678	119791874	chr8:119789678-119791874	0	-	119789678	119789678	8553170	2	68,551,	0,1645,
#Partially deleted in new
chr8	119803960	119832834	chr8:119803960-119832834	0	-	119806356	119832564	789624	4	59,119,55,353,	0,2322,27716,28521,
#Partially deleted in new
chr8	119833975	119856010	chr8:119833975-119856010	3	-	119834892	119855795	789624	9	1026,149,155,53,139,91,135,169,397,	0,4283,7818,8800,9633,13014,16406,19071,21638,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	119838735	119840385	chr8:119838735-119840385	3	-	119838735	119838735	8553170	1	1650,	0,
#Partially deleted in new
chr8	119852757	119855858	chr8:119852757-119855858	0	-	119852757	119852757	8553170	2	458,245,	0,2856,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	119862661	119862956	chr8:119862661-119862956	3	+	119862661	119862661	8553170	1	295,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	119867418	119874488	chr8:119867418-119874488	3	-	119867418	119867418	8553170	2	231,1668,	0,5402,
#Partially deleted in new
chr8	119872477	119874483	chr8:119872477-119874483	1	-	119872477	119872477	8553170	3	46,176,197,	0,658,1809,
#Partially deleted in new
chr8	119873716	120050913	chr8:119873716-120050913	3	+	119873846	120049704	789624	9	252,179,124,179,186,135,71,105,1338,	0,54683,56098,91515,127808,129260,133088,135312,175859,
#Partially deleted in new
chr8	119873716	120050044	chr8:119873716-120050044	1	+	119873846	120049704	789624	7	252,179,186,135,71,105,469,	0,91515,127808,129260,133088,135312,175859,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	119891131	119891229	chr8:119891131-119891229	7	-	119891131	119891131	16724991	1	98,	0,
#Partially deleted in new
chr8	119969787	120049591	chr8:119969787-120049591	0	+	119969787	119969787	8553170	6	53,186,135,71,105,16,	0,31737,33189,37017,39241,79788,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	120052179	120056184	chr8:120052179-120056184	3	+	120052179	120052179	8553170	2	216,274,	0,3731,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	120054679	120056201	chr8:120054679-120056201	1	+	120054679	120054679	8553170	2	245,277,	0,1245,
#Partially deleted in new
chr8	120107377	120232087	chr8:120107377-120232087	1	+	120147842	120213942	789624	20	137,125,117,144,87,156,120,165,162,152,130,146,130,127,140,127,140,133,60,621,	0,40428,50752,55048,60783,89413,90433,92024,96331,99565,100854,102378,105070,106557,108973,117710,119249,119842,121332,124089,
#Partially deleted in new
chr8	120125107	120372036	chr8:120125107-120372036	3	+	120147842	120371231	789624	48	233,125,117,144,87,156,120,165,162,152,130,146,130,140,127,140,133,60,152,130,123,150,117,147,57,140,124,144,165,39,139,143,110,159,78,87,54,96,54,54,54,72,36,67,189,78,156,885,	0,22698,33022,37318,43053,71683,72703,74294,78601,81835,83124,84648,87340,91243,99980,101519,102112,103602,106359,118771,122505,125509,130132,137760,141719,144927,153003,153327,154827,155603,155813,158528,160753,164500,172403,175624,184901,188824,190425,190836,207033,207556,216217,217272,220267,242063,244222,246044,
#Partially deleted in new
chr8	120125107	120370917	chr8:120125107-120370917	1	+	120147842	120370367	789624	48	233,125,117,144,87,156,120,165,162,152,130,146,130,140,127,140,133,60,152,130,123,150,117,147,57,140,124,144,165,39,139,143,110,159,78,87,54,96,54,54,54,72,36,67,189,78,156,582,	0,22698,33022,37318,43053,71683,72703,74294,78601,81835,83124,84648,87340,91243,99980,101519,102112,103602,106359,118771,122505,125509,130132,137760,141719,144927,153003,153327,154827,155603,155813,158528,160753,164500,172403,175624,184901,188824,190425,190836,207033,207556,216217,217272,220267,242063,244222,245228,
#Partially deleted in new
chr8	120125143	120277865	chr8:120125143-120277865	0	+	120125143	120125143	8553170	27	197,125,117,144,87,156,120,165,162,152,130,146,130,140,127,140,133,60,152,130,123,150,117,147,57,140,381,	0,22662,32986,37282,43017,71647,72667,74258,78565,81799,83088,84612,87304,91207,99944,101483,102076,103566,106323,118735,122469,125473,130096,137724,141683,144891,152341,
#Partially deleted in new
chr8	120196800	120216492	chr8:120196800-120216492	0	+	120196800	120216492	789624	7	146,162,152,130,146,130,142,	0,6908,10142,11431,12955,15647,19550,
#Partially deleted in new
chr8	120196915	120266992	chr8:120196915-120266992	0	+	120196915	120266903	789624	20	31,120,165,162,152,130,146,130,140,127,140,133,60,152,130,123,150,117,147,166,	0,895,2486,6793,10027,11316,12840,15532,19435,28172,29711,30304,31794,34551,46963,50697,53701,58324,65952,69911,
#Partially deleted in new
chr8	120250746	120372027	chr8:120250746-120372027	1	+	120270073	120371231	789624	28	20,117,147,57,66,69,124,144,165,39,139,143,110,159,78,87,54,96,54,54,54,72,36,67,189,78,156,876,	0,4493,12121,16080,19288,19359,27364,27688,29188,29964,30174,32889,35114,38861,46764,49985,59262,63185,64786,65197,81394,81917,90578,91633,94628,116424,118583,120405,
#Partially deleted in new
chr8	120345445	120371081	chr8:120345445-120371081	0	+	120345445	120370834	789624	4	118,78,156,345,	0,21725,23884,25291,
#Partially deleted in new
chr8	120380760	120414112	chr8:120380760-120414112	0	-	120396103	120414112	789624	3	414,167,122,	0,15198,33230,
#Partially deleted in new
chr8	120395436	120445402	chr8:120395436-120445402	0	-	120425340	120445094	789624	6	689,122,87,61,124,335,	0,18554,24415,29869,47748,49631,
#Partially deleted in new
chr8	120395846	120445386	chr8:120395846-120445386	3	-	120396103	120445094	0	7	279,122,87,61,94,124,319,	0,18144,24005,29459,36183,47338,49221,
#Partially deleted in new
chr8	120395846	120414191	chr8:120395846-120414191	0	-	120395846	120395846	8553170	2	279,201,	0,18144,
#Partially deleted in new
chr8	120395847	120416079	chr8:120395847-120416079	0	-	120395847	120395847	8553170	2	278,2089,	0,18143,
#Partially deleted in new
chr8	120413990	120445092	chr8:120413990-120445092	0	-	120413990	120443263	789624	6	122,87,61,94,124,145,	0,5861,11315,18039,29194,30957,
#Partially deleted in new
chr8	120419655	120445099	chr8:120419655-120445099	0	-	120419655	120419655	8553170	4	283,61,124,32,	0,5650,23529,25412,
#Partially deleted in new
chr8	120445399	120451335	chr8:120445399-120451335	0	+	120445399	120445399	8553170	3	189,81,333,	0,1033,5603,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	120445421	120452829	chr8:120445421-120452829	0	+	120445421	120445421	8553170	4	167,81,74,1659,	0,1011,5581,5749,
#Partially deleted in new
chr8	120445421	120470937	chr8:120445421-120470937	0	+	120445470	120463699	789624	11	167,81,74,152,59,145,118,135,95,75,118,	0,1011,5581,5749,8425,10013,11131,13793,15739,18265,25398,
#Partially deleted in new
chr8	120445425	120523635	chr8:120445425-120523635	3	+	120445470	120523336	789624	22	163,81,74,152,59,145,118,135,95,70,118,174,108,162,118,156,96,267,250,114,66,338,	0,1007,5577,5745,8421,10009,11127,13789,15735,18266,25394,42733,45037,51967,57066,61280,64508,70499,72425,73278,77228,77872,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	120459275	120473950	chr8:120459275-120473950	0	+	120459275	120459275	8553170	4	74,95,75,3131,	0,1885,4411,11544,
#Partially deleted in new
chr8	120488160	120490703	chr8:120488160-120490703	0	+	120488160	120488160	8553170	2	172,241,	0,2302,
#Partially deleted in new
chr8	120518702	120541965	chr8:120518702-120541965	0	+	120518702	120538714	789624	4	115,66,166,120,	0,3951,19991,23143,
#Partially deleted in new
chr8	120535744	120813273	chr8:120535744-120813273	3	-	120538876	120811843	789624	8	3225,191,197,140,208,217,797,189,	0,6065,13017,39341,96699,157947,275528,277340,
#Partially deleted in new
chr8	120538520	120812143	chr8:120538520-120812143	1	-	120538876	120811843	789624	7	449,191,197,140,208,217,871,	0,3289,10241,36565,93923,155171,272752,
#Deleted in new
chr8	120538694	120542133	chr8:120538694-120542133	0	+	120538694	120538694	8553170	3	169,58,140,	0,2467,3299,
#Partially deleted in new
chr8	120570258	120811563	chr8:120570258-120811563	0	-	120570258	120570258	8553170	5	1106,140,208,217,291,	0,4827,62185,123433,241014,
#Partially deleted in new
chr8	120632609	120693908	chr8:120632609-120693908	0	-	120632609	120632609	8553170	3	42,155,217,	0,22269,61082,
#Partially deleted in new
chr8	120635557	120638204	chr8:120635557-120638204	7	-	120635557	120635557	16724991	2	481,1333,	0,1314,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	120761252	120776832	chr8:120761252-120776832	3	+	120761252	120761252	789624	5	120,87,1040,252,474,	0,4525,7406,14022,15106,
#Deleted in new
chr8	120811758	120812852	chr8:120811758-120812852	0	-	120811758	120811843	789624	2	311,248,	0,846,
#Deleted in new
chr8	120812218	120813359	chr8:120812218-120813359	3	+	120812218	120812218	8553170	1	1141,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	120913064	121119754	chr8:120913064-121119754	3	+	120913064	120913064	8553170	4	95,93,70,518,	0,130318,187765,206172,
#Deleted in new
chr8	121113357	121113919	chr8:121113357-121113919	7	-	121113357	121113357	16724991	1	562,	0,
#Deleted in new
chr8	121380136	121380465	chr8:121380136-121380465	7	-	121380136	121380136	16724991	1	329,	0,
#Partially deleted in new
chr8	121612115	121641390	chr8:121612115-121641390	3	-	121614108	121629340	789624	4	2923,102,627,538,	0,4989,16598,28737,
#Deleted in new
chr8	121639292	121643451	chr8:121639292-121643451	0	+	121639292	121639292	8553170	4	93,257,148,79,	0,1897,3291,4080,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	121639309	121904273	chr8:121639309-121904273	1	+	121639309	121639309	8553170	9	76,257,148,145,126,132,84,102,195,	0,1880,3274,4063,4956,68234,223616,264129,264769,
#Partially deleted in new
chr8	121639345	121644693	chr8:121639345-121644693	1	+	121639345	121639345	789624	4	823,257,148,428,	0,1844,3238,4920,
#Deleted in new
chr8	121639901	121642717	chr8:121639901-121642717	1	+	121639901	121639901	8553170	3	267,174,134,	0,1288,2682,
#Partially deleted in new
chr8	121641435	121644693	chr8:121641435-121644693	0	+	121641435	121641435	8553170	3	19,148,428,	0,1148,2830,
#Partially deleted in new
chr8	121671772	121684562	chr8:121671772-121684562	3	-	121671772	121671772	8553170	3	171,165,78,	0,8504,12712,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	121679125	121707631	chr8:121679125-121707631	1	+	121679125	121679125	8553170	3	132,119,88,	0,773,28418,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	121697584	121993876	chr8:121697584-121993876	3	+	121697584	121697584	8553170	4	178,132,136,279,	0,9959,182045,296013,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	121954639	122127184	chr8:121954639-122127184	3	-	121954639	121954639	8553170	3	509,121,160,	0,26977,172385,
#Deleted in new
chr8	122091479	122091609	chr8:122091479-122091609	7	+	122091479	122091479	16724991	1	130,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	122414331	122428551	chr8:122414331-122428551	3	-	122414331	122414331	8553170	3	224,198,131,	0,2493,14089,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	122671290	122671394	chr8:122671290-122671394	3	+	122671290	122671290	8553170	1	104,	0,
#Partially deleted in new
chr8	122700268	122703423	chr8:122700268-122703423	3	-	122700268	122700268	8553170	2	144,357,	0,2798,
#Deleted in new
chr8	122769273	122770150	chr8:122769273-122770150	7	+	122769273	122769273	16724991	1	877,	0,
#Deleted in new
chr8	122779970	122780830	chr8:122779970-122780830	3	-	122779970	122779970	8553170	1	860,	0,
#Deleted in new
chr8	122780759	122781071	chr8:122780759-122781071	3	+	122780759	122780759	8553170	1	312,	0,
#Partially deleted in new
chr8	122781393	122974512	chr8:122781393-122974512	3	+	122951510	122954024	0	4	553,63,2737,1271,	0,82083,169898,191848,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	122807745	122816517	chr8:122807745-122816517	0	+	122807745	122807745	8553170	5	93,59,180,74,140,	0,997,1296,4184,8632,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	122808769	122815774	chr8:122808769-122815774	3	+	122808769	122808769	8553170	5	32,180,121,74,351,	0,272,1683,3160,6654,
#Partially deleted in new
chr8	122863384	122952009	chr8:122863384-122952009	0	+	122951510	122952009	789624	2	155,718,	0,87907,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	122977025	122985629	chr8:122977025-122985629	3	-	122977025	122977025	8553170	2	200,126,	0,8478,
#Partially deleted in new
chr8	123002559	123030751	chr8:123002559-123030751	3	+	123002559	123002559	8553170	2	103,522,	0,27670,
#Partially deleted in new
chr8	123013163	123042423	chr8:123013163-123042423	3	-	123015446	123042122	0	8	2422,111,53,96,27,65,112,454,	0,6031,8283,9520,10549,11822,17441,28806,
#Partially deleted in new
chr8	123014148	123042122	chr8:123014148-123042122	1	-	123015446	123042122	0	8	1437,51,53,96,27,65,112,153,	0,5046,7298,8535,9564,10837,16456,27821,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	123014148	123030719	chr8:123014148-123030719	0	-	123014148	123014148	8553170	6	5157,53,96,27,65,115,	0,7298,8535,9564,10837,16456,
#Partially deleted in new
chr8	123015164	123042302	chr8:123015164-123042302	1	-	123015446	123042122	789624	4	421,111,53,333,	0,4030,6282,26805,
#Partially deleted in new
chr8	123015441	123025650	chr8:123015441-123025650	1	-	123015446	123025015	789624	7	144,111,53,96,27,65,79,	0,3753,6005,7242,8271,9544,10130,
#Partially deleted in new
chr8	123015445	123025772	chr8:123015445-123025772	1	-	123015446	123025015	789624	7	140,111,53,96,27,65,50,	0,3749,6001,7238,8267,9540,10277,
#Partially deleted in new
chr8	123041967	123084269	chr8:123041967-123084269	0	+	123077232	123084269	789624	3	398,147,108,	0,35143,42194,
#Partially deleted in new
chr8	123072679	123152150	chr8:123072679-123152150	3	+	123072769	123151939	789624	22	167,147,116,179,152,160,201,177,80,147,134,134,180,233,153,136,93,141,195,139,93,345,	0,4431,10022,11482,20911,24602,28127,32608,36637,36794,47375,53376,53828,55601,56386,57518,61434,68081,69582,72037,77356,79126,
#Partially deleted in new
chr8	123072681	123109620	chr8:123072681-123109620	0	+	123072810	123109620	789624	4	165,177,80,147,	0,32606,36635,36792,
#Partially deleted in new
chr8	123072712	123151954	chr8:123072712-123151954	1	+	123072769	123151939	789624	20	134,147,116,179,152,160,201,177,80,147,134,134,180,233,153,136,141,139,93,149,	0,4398,9989,11449,20878,24569,28094,32575,36604,36761,47342,53343,53795,55568,56353,57485,68048,72004,77323,79093,
#Partially deleted in new
chr8	123072712	123151964	chr8:123072712-123151964	1	+	123077232	123151939	789624	21	134,147,179,152,160,201,177,80,147,134,134,180,233,153,136,93,141,195,139,93,159,	0,4398,11449,20878,24569,28094,32575,36604,36761,47342,53343,53795,55568,56353,57485,61401,68048,69549,72004,77323,79093,
#Partially deleted in new
chr8	123072722	123101087	chr8:123072722-123101087	0	+	123072722	123072722	8553170	7	124,147,116,179,152,160,281,	0,4388,9979,11439,20868,24559,28084,
#Partially deleted in new
chr8	123072758	123152153	chr8:123072758-123152153	1	+	123077232	123151939	789624	21	88,147,179,152,160,201,177,80,93,134,134,180,233,153,136,93,141,195,139,93,348,	0,4352,11403,20832,24523,28048,32529,36558,36769,47296,53297,53749,55522,56307,57439,61355,68002,69503,71958,77277,79047,
#Partially deleted in new
chr8	123072765	123152150	chr8:123072765-123152150	0	+	123072769	123084180	789624	20	81,147,179,152,160,201,177,80,147,134,134,180,233,149,136,93,141,139,93,345,	0,4345,11396,20825,24516,28041,32522,36551,36708,47289,53290,53742,55515,56304,57432,61348,67995,71951,77270,79040,
#Partially deleted in new
chr8	123073248	123097383	chr8:123073248-123097383	0	+	123073384	123097383	789624	6	183,147,116,179,152,102,	0,3862,9453,10913,20342,24033,
#Partially deleted in new
chr8	123074919	123093639	chr8:123074919-123093639	0	+	123084184	123093639	789624	5	114,147,116,179,49,	0,2191,7782,9242,18671,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	123082507	123097848	chr8:123082507-123097848	0	+	123082507	123082507	8553170	3	1833,152,567,	0,11083,14774,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	123093660	123104201	chr8:123093660-123104201	0	+	123093660	123102270	789624	4	82,160,201,1955,	0,3621,7146,8586,
#Partially deleted in new
chr8	123100952	123152153	chr8:123100952-123152153	1	+	123105356	123151939	789624	15	55,177,80,147,134,134,180,149,136,93,141,195,139,93,348,	0,4335,8364,8521,19102,25103,25555,28117,29245,33161,39808,41309,43764,49083,50853,
#Partially deleted in new
chr8	123109333	123129172	chr8:123109333-123129172	0	+	123109333	123126080	789624	6	63,147,134,180,233,107,	0,140,16722,17174,18947,19732,
#Partially deleted in new
chr8	123123105	123123682	chr8:123123105-123123682	7	+	123123105	123123105	16724991	1	577,	0,
#Partially deleted in new
chr8	123127849	123142456	chr8:123127849-123142456	0	+	123127849	123127849	8553170	5	664,153,136,141,195,	0,1216,2348,12911,14412,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	123178959	123180615	chr8:123178959-123180615	0	+	123178959	123178959	8553170	4	178,108,98,274,	0,804,1172,1382,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	123179046	123209762	chr8:123179046-123209762	3	+	123182856	123207688	0	5	1183,1311,168,125,2606,	0,2979,12756,14977,28110,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	123179046	123210079	chr8:123179046-123210079	1	+	123182856	123209496	0	6	1183,1311,168,125,260,654,	0,2979,12756,14977,28110,30379,
#Partially deleted in new
chr8	123179097	123182583	chr8:123179097-123182583	0	+	123179097	123179097	8553170	4	40,218,98,232,	0,556,1034,3254,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	123179113	123180719	chr8:123179113-123180719	0	+	123179113	123179113	8553170	3	24,98,378,	0,1018,1228,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	123180309	123180525	chr8:123180309-123180525	3	-	123180309	123180309	8553170	1	216,	0,
#Deleted in new
chr8	123181637	123182788	chr8:123181637-123182788	3	-	123181637	123181637	8553170	2	515,262,	0,889,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	123182680	123210074	chr8:123182680-123210074	1	+	123182856	123209496	0	5	656,168,125,260,649,	0,9122,11343,24476,26745,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	123182680	123210078	chr8:123182680-123210078	1	+	123182856	123209535	0	4	656,125,269,554,	0,11343,24476,26844,
#Partially deleted in new
chr8	123183157	123199994	chr8:123183157-123199994	0	+	123183157	123183157	8553170	4	179,168,125,142,	0,8645,10866,16695,
#Partially deleted in new
chr8	123192874	123192932	chr8:123192874-123192932	7	+	123192874	123192874	16724991	1	58,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	123201171	123202743	chr8:123201171-123202743	1	-	123201171	123201171	789624	3	283,339,536,	0,472,1036,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	123201171	123202743	chr8:123201171-123202743	3	-	123201171	123201171	8553170	2	811,536,	0,1036,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	123201171	123202743	chr8:123201171-123202743	0	-	123201171	123201171	8553170	2	283,536,	0,1036,
#Deleted in new
chr8	123215787	123215863	chr8:123215787-123215863	3	-	123215787	123215787	5263520	1	76,	0,
#Partially deleted in new
chr8	123219956	123241398	chr8:123219956-123241398	3	-	123220102	123241346	789624	6	341,133,458,144,96,169,	0,6543,11343,17841,19092,21273,
#Partially deleted in new
chr8	123220194	123241286	chr8:123220194-123241286	0	-	123220194	123220194	8553170	6	103,133,36,144,96,57,	0,6305,11527,17603,18854,21035,
#Partially deleted in new
chr8	123226188	123267387	chr8:123226188-123267387	3	-	123226472	123267293	789624	5	444,458,144,96,115,	0,5111,11609,12860,41084,
#Partially deleted in new
chr8	123226359	123231592	chr8:123226359-123231592	0	-	123226359	123226359	8553170	3	59,133,293,	0,140,4940,
#Partially deleted in new
chr8	123226497	123241344	chr8:123226497-123241344	0	-	123226497	123226497	8553170	5	135,458,144,96,115,	0,4802,11300,12551,14732,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	123231403	123239386	chr8:123231403-123239386	0	-	123231403	123231403	8553170	3	354,144,338,	0,6394,7645,
#Partially deleted in new
chr8	123231598	123274284	chr8:123231598-123274284	0	-	123231598	123267293	789624	5	159,144,96,114,68,	0,6199,7450,35674,42618,
#Deleted in new
chr8	123236851	123237062	chr8:123236851-123237062	7	+	123236851	123236851	16724991	1	211,	0,
#Partially deleted in new
chr8	123238568	123241355	chr8:123238568-123241355	0	-	123238568	123238568	8553170	2	576,126,	0,2661,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	123239639	123241377	chr8:123239639-123241377	0	-	123239639	123239639	8553170	2	343,148,	0,1590,
#Partially deleted in new
chr8	123248450	123274487	chr8:123248450-123274487	1	-	123253324	123255946	0	4	1870,2850,114,366,	0,4871,18822,25671,
#Partially deleted in new
chr8	123248455	123274495	chr8:123248455-123274495	3	-	123253324	123255946	0	4	1865,2850,114,279,	0,4866,18817,25761,
#Partially deleted in new
chr8	123249659	123267391	chr8:123249659-123267391	0	-	123249659	123249659	8553170	2	661,119,	0,17613,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	123250129	123275541	chr8:123250129-123275541	1	-	123253324	123255946	0	4	191,2850,114,202,	0,3192,17143,25210,
#Deleted in new
chr8	123252428	123253442	chr8:123252428-123253442	0	-	123253324	123253442	789624	1	1014,	0,
#Partially deleted in new
chr8	123255534	123274484	chr8:123255534-123274484	0	-	123255534	123255534	8553170	3	637,114,363,	0,11738,18587,
#Partially deleted in new
chr8	123255919	123273997	chr8:123255919-123273997	0	-	123255919	123255919	8553170	3	252,114,248,	0,11353,17830,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	123256119	123274266	chr8:123256119-123274266	0	-	123256119	123256119	8553170	4	52,185,114,145,	0,913,11153,18002,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	123262842	123262949	chr8:123262842-123262949	3	+	123262842	123262842	8553170	1	107,	0,
#Deleted in new
chr8	123288354	123290503	chr8:123288354-123290503	7	+	123288354	123288354	16724991	1	2149,	0,
#Partially deleted in new
chr8	123319849	123396465	chr8:123319849-123396465	3	-	123321133	123396357	0	28	1326,129,134,390,144,123,160,197,136,186,187,133,315,91,160,89,175,116,109,108,118,204,88,103,166,50,149,279,	0,3088,6043,8340,14028,14350,16523,17775,19461,25034,26236,26768,27242,28333,29435,36539,37712,39371,39727,41689,49208,49971,51053,51386,51820,52787,60679,76337,
#Partially deleted in new
chr8	123319849	123396434	chr8:123319849-123396434	0	-	123372662	123396357	789624	26	1326,129,134,144,123,160,197,136,186,187,133,315,91,160,89,175,116,109,108,118,204,88,103,166,50,248,	0,3088,6043,14028,14350,16523,17775,19461,25034,26236,26768,27242,28333,29435,36539,37712,39371,39727,41689,49208,49971,51053,51386,51820,52787,76337,
#Partially deleted in new
chr8	123320501	123416350	chr8:123320501-123416350	1	-	123321133	123347257	789624	29	674,129,134,390,144,123,160,197,136,186,187,133,315,87,137,89,175,116,109,108,118,204,88,103,166,50,149,433,103,	0,2436,5391,7688,13376,13698,15871,17123,18809,24382,25584,26116,26590,27685,28783,35887,37060,38719,39075,41037,48556,49319,50401,50734,51168,52135,60027,80241,95746,
#Partially deleted in new
chr8	123320680	123396379	chr8:123320680-123396379	0	-	123380660	123396357	789624	28	495,129,134,390,144,123,160,197,136,186,187,133,315,91,160,89,175,116,109,108,118,202,88,103,166,50,149,197,	0,2257,5212,7509,13197,13519,15692,16944,18630,24203,25405,25937,26411,27502,28604,35708,36881,38540,38896,40858,48377,49140,50222,50555,50989,51956,59848,75502,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	123342413	123342519	chr8:123342413-123342519	3	+	123342413	123342413	8553170	1	106,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr8	123344512	123396401	chr8:123344512-123396401	0	-	123344512	123344512	8553170	19	557,187,133,315,91,160,89,175,116,109,108,118,204,88,103,166,50,149,215,	0,1573,2105,2579,3670,4772,11876,13049,14708,15064,17026,24545,25308,26390,26723,27157,28124,36016,51674,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	123348033	123348130	chr8:123348033-123348130	3	+	123348033	123348033	5263520	1	97,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	123348033	123348130	chr8:123348033-123348130	3	-	123348033	123348033	5263520	1	97,	0,
#Deleted in new
chr8	123352180	123352643	chr8:123352180-123352643	7	+	123352180	123352180	16724991	1	463,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	123356099	123357621	chr8:123356099-123357621	0	-	123356099	123356099	8553170	2	378,60,	0,1462,
#Partially deleted in new
chr8	123359243	123369388	chr8:123359243-123369388	0	-	123359243	123359243	8553170	5	93,109,108,118,116,	0,333,2295,9814,10029,
#Partially deleted in new
chr8	123372661	123380914	chr8:123372661-123380914	0	-	123372661	123372661	8553170	2	25,386,	0,7867,
#Deleted in new
chr8	123400581	123402095	chr8:123400581-123402095	7	+	123400581	123400581	16724991	1	1514,	0,
#Partially deleted in new
chr8	123416724	123442021	chr8:123416724-123442021	3	+	123416849	123441415	0	6	208,100,51,149,125,716,	0,11199,13258,19728,20485,24581,
#Partially deleted in new
chr8	123416725	123442240	chr8:123416725-123442240	1	+	123428020	123441415	0	6	131,100,51,149,125,935,	0,11198,13257,19727,20484,24580,
#Partially deleted in new
chr8	123416754	123448091	chr8:123416754-123448091	1	+	123428020	123441415	789624	7	102,100,51,149,125,192,45,	0,11169,13228,19698,20455,24551,31292,
#Partially deleted in new
chr8	123416770	123430061	chr8:123416770-123430061	0	+	123416770	123416770	8553170	3	162,100,79,	0,11153,13212,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	123416773	123470028	chr8:123416773-123470028	1	+	123428020	123467150	8553170	7	83,100,51,149,125,44,2950,	0,11150,13209,19679,20436,24532,50305,
#Partially deleted in new
chr8	123416791	123441623	chr8:123416791-123441623	0	+	123428020	123435534	8553170	7	65,100,51,101,149,125,318,	0,11132,13191,18650,19661,20418,24514,
#Partially deleted in new
chr8	123416800	123441596	chr8:123416800-123441596	0	+	123416800	123427982	789624	7	132,100,51,101,149,125,291,	0,11123,13182,18641,19652,20409,24505,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	123416802	123467230	chr8:123416802-123467230	0	+	123428020	123448058	8553170	8	54,100,51,149,125,44,178,152,	0,11121,13180,19650,20407,24503,31244,50276,
#Partially deleted in new
chr8	123416812	123441524	chr8:123416812-123441524	1	+	123416849	123438216	789624	7	120,100,51,149,125,105,219,	0,11111,13170,19640,20397,21321,24493,
#Partially deleted in new
chr8	123429994	123442021	chr8:123429994-123442021	1	+	123437270	123441415	789624	3	39,125,716,	0,7215,11311,
#Partially deleted in new
chr8	123454980	123455107	chr8:123454980-123455107	3	-	123454980	123454980	8553170	1	127,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	123497888	123541206	chr8:123497888-123541206	3	-	123503372	123541014	789624	9	5574,144,183,185,94,93,50,113,308,	0,6715,8503,15309,16351,34009,35302,36813,43010,
#Partially deleted in new
chr8	123503105	123506625	chr8:123503105-123506625	0	-	123503105	123503105	8553170	3	357,144,234,	0,1498,3286,
#Partially deleted in new
chr8	123503117	123532143	chr8:123503117-123532143	0	-	123503117	123503117	8553170	6	345,144,183,185,94,246,	0,1486,3274,10080,11122,28780,
#Partially deleted in new
chr8	123503126	123541206	chr8:123503126-123541206	1	-	123503372	123541014	789624	7	336,144,183,93,50,113,308,	0,1477,3265,28771,30064,31575,37772,
#Partially deleted in new
chr8	123513273	123541189	chr8:123513273-123541189	0	-	123513273	123513273	8553170	6	109,282,93,50,113,291,	0,778,18624,19917,21428,27625,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	123526995	123541190	chr8:123526995-123541190	0	-	123526995	123526995	8553170	5	259,93,50,113,292,	0,4902,6195,7706,13903,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	123563069	123568762	chr8:123563069-123568762	3	-	123563069	123563069	8553170	2	343,194,	0,5499,
#Deleted in new
chr8	123588758	123589046	chr8:123588758-123589046	3	+	123588758	123588758	8553170	1	288,	0,
#Partially deleted in new
chr8	123614224	123639644	chr8:123614224-123639644	1	+	123614224	123614224	8553170	5	51,118,107,124,143,	0,2501,20089,24669,25277,
#Partially deleted in new
chr8	123614224	123658570	chr8:123614224-123658570	3	+	123614224	123614224	8553170	4	51,118,75,322,	0,2501,11462,44024,
#Partially deleted in new
chr8	123645526	123652950	chr8:123645526-123652950	3	-	123645738	123652926	789624	3	502,106,1374,	0,1382,6050,
#Partially deleted in new
chr8	123680793	123737402	chr8:123680793-123737402	3	-	123681239	123737334	789624	12	566,113,76,102,69,80,34,171,95,76,123,83,	0,3816,8077,12403,12917,14708,14894,17595,21848,31884,54961,56526,
#Partially deleted in new
chr8	123680794	123737407	chr8:123680794-123737407	1	-	123681239	123737334	789624	11	565,113,76,102,69,80,34,171,95,76,88,	0,3815,8076,12402,12916,14707,14893,17594,21847,31883,56525,
#Partially deleted in new
chr8	123695546	123729248	chr8:123695546-123729248	0	-	123695546	123712681	789624	6	35,34,171,95,76,152,	0,141,2842,7095,17131,33550,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	123711632	123728511	chr8:123711632-123728511	0	-	123711632	123711632	8553170	2	1121,843,	0,16036,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	123712708	123727923	chr8:123712708-123727923	0	-	123712708	123712708	8553170	2	45,255,	0,14960,
#Deleted in new
chr8	123728269	123729250	chr8:123728269-123729250	0	-	123728269	123728269	8553170	2	413,154,	0,827,
#Partially deleted in new
chr8	123768455	123810479	chr8:123768455-123810479	1	+	123768702	123810390	789624	23	319,85,152,58,68,114,91,63,107,39,113,116,113,87,133,149,135,114,73,150,105,124,198,	0,5624,6691,8809,9569,10203,11529,12024,16014,16625,17173,18039,18805,19208,21157,29634,31064,31316,36811,37624,39816,40437,41826,
#Partially deleted in new
chr8	123768456	123815452	chr8:123768456-123815452	3	+	123768702	123812704	789624	24	318,85,152,58,68,114,91,63,107,39,113,116,113,87,133,149,135,114,73,150,105,124,70,2934,	0,5623,6690,8808,9568,10202,11528,12023,16013,16624,17172,18038,18804,19207,21156,29633,31063,31315,36810,37623,39815,40436,41825,44062,
#Partially deleted in new
chr8	123768645	123814773	chr8:123768645-123814773	0	+	123768702	123780489	789624	24	129,85,152,58,68,114,98,63,107,39,113,116,113,87,133,149,135,114,73,150,105,124,70,2255,	0,5434,6501,8619,9379,10013,11339,11834,15824,16435,16983,17849,18615,19018,20967,29444,30874,31126,36621,37434,39626,40247,41636,43873,
#Partially deleted in new
chr8	123780026	123784795	chr8:123780026-123784795	0	+	123780026	123780026	8553170	3	49,63,326,	0,453,4443,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	123780479	123787355	chr8:123780479-123787355	0	+	123780479	123786025	789624	7	63,107,39,113,148,116,95,	0,3990,4601,5149,5524,6015,6781,
#Partially deleted in new
chr8	123808758	123812760	chr8:123808758-123812760	0	+	123808758	123808758	8553170	3	258,70,242,	0,1523,3760,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	123808906	123812842	chr8:123808906-123812842	0	+	123808906	123812058	789624	4	110,70,122,324,	0,1375,3149,3612,
#Deleted in new
chr8	123808928	123811455	chr8:123808928-123811455	0	+	123808928	123808928	8553170	2	88,1174,	0,1353,
#Boundary problem: need 41, got 0, diff 41, mapped 0.0
chr8	123851986	124120061	chr8:123851986-124120061	3	+	123955998	124119790	789624	41	199,83,121,55,132,63,79,157,187,193,347,109,181,121,101,91,120,153,178,125,135,150,111,162,181,227,123,40,116,132,126,128,171,161,143,89,99,242,164,101,455,	0,104005,111291,114020,114172,118048,121447,123163,123911,125430,128478,134081,151180,158607,161444,165641,169563,171457,183290,187895,193780,197620,208193,208561,209865,212360,214441,215780,217373,218480,219519,224211,230301,239436,242909,245284,245798,249110,251159,266857,267620,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	123924758	123925933	chr8:123924758-123925933	3	-	123924758	123924758	8553170	2	118,213,	0,962,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	123984137	124040782	chr8:123984137-124040782	3	-	123984137	123984137	789624	6	1636,43,117,192,170,157,	0,20052,29456,30145,31735,56488,
#Partially deleted in new
chr8	124036009	124040468	chr8:124036009-124040468	3	-	124036009	124036009	8553170	2	298,29,	0,4430,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	124046072	124171522	chr8:124046072-124171522	3	-	124046072	124046072	5263520	5	704,137,185,625,95,	0,1484,12715,14095,125355,
#Deleted in new
chr8	124141887	124143512	chr8:124141887-124143512	7	+	124141887	124141887	16724991	2	762,694,	0,931,
#Deleted in new
chr8	124151922	124152433	chr8:124151922-124152433	7	+	124151922	124151922	16724991	1	511,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	124192670	124247398	chr8:124192670-124247398	3	-	124192670	124192670	789624	3	874,206,115,	0,15445,54613,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	124271682	124277584	chr8:124271682-124277584	3	+	124271682	124271682	8553170	3	128,123,302,	0,4431,5600,
#Deleted in new
chr8	124301314	124301804	chr8:124301314-124301804	7	+	124301314	124301314	16724991	1	490,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	124306188	124372692	chr8:124306188-124372692	3	-	124313959	124372157	789624	7	7873,106,43,55,68,45,839,	0,13897,15916,17132,21165,24559,65665,
#Deleted in new
chr8	124450819	124453026	chr8:124450819-124453026	3	+	124450927	124452274	789624	1	2207,	0,
#Deleted in new
chr8	124450916	124452741	chr8:124450916-124452741	0	+	124450927	124452274	789624	3	341,191,290,	0,1235,1535,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	124462484	124474564	chr8:124462484-124474564	3	-	124462484	124462484	789624	2	5174,480,	0,11600,
#Deleted in new
chr8	124472807	124474354	chr8:124472807-124474354	1	-	124472807	124472807	789624	3	180,110,69,	0,1277,1478,
#Deleted in new
chr8	124472809	124474576	chr8:124472809-124474576	0	-	124472809	124472809	8553170	1	1767,	0,
#Partially deleted in new
chr8	124474737	124487914	chr8:124474737-124487914	3	+	124475109	124487644	789624	2	553,2084,	0,11093,
#Partially deleted in new
chr8	124483344	124486234	chr8:124483344-124486234	0	+	124486030	124486234	789624	2	63,404,	0,2486,
#Partially deleted in new
chr8	124488484	124539078	chr8:124488484-124539078	0	-	124508508	124539046	789624	9	212,127,71,77,41,86,64,50,54,	0,5348,6987,15786,19989,20118,30333,33666,50540,
#Partially deleted in new
chr8	124488500	124539088	chr8:124488500-124539088	1	-	124488593	124522976	789624	10	196,127,71,77,41,86,43,144,66,64,	0,5332,6971,15770,19973,20102,27245,27386,34436,50524,
#Partially deleted in new
chr8	124488507	124539084	chr8:124488507-124539084	3	-	124488593	124539046	0	12	189,127,71,77,41,86,43,144,64,50,66,60,	0,5325,6964,15763,19966,20095,27238,27379,30310,33643,34429,50517,
#Partially deleted in new
chr8	124488507	124539088	chr8:124488507-124539088	0	-	124503920	124539046	789624	13	189,127,71,112,77,41,86,43,144,64,50,66,64,	0,5325,6964,15332,15763,19966,20095,27238,27379,30310,33643,34429,50517,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	124488509	124491643	chr8:124488509-124491643	3	+	124488509	124488509	8553170	2	1773,582,	0,2552,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	124488509	124508515	chr8:124488509-124508515	0	-	124488509	124488509	8553170	4	187,1710,77,42,	0,5323,15761,19964,
#Partially deleted in new
chr8	124488512	124539076	chr8:124488512-124539076	1	-	124488593	124518878	0	10	184,127,71,77,41,86,43,144,64,52,	0,5320,6959,15758,19961,20090,27233,27374,30305,50512,
#Partially deleted in new
chr8	124488629	124539070	chr8:124488629-124539070	0	-	124488629	124539046	789624	13	67,127,71,112,73,41,86,43,144,64,50,66,46,	0,5203,6842,15210,15645,19844,19973,27116,27257,30188,33521,34307,50395,
#Partially deleted in new
chr8	124493802	124504698	chr8:124493802-124504698	0	-	124493802	124493802	8553170	3	157,71,428,	0,1669,10468,
#Partially deleted in new
chr8	124493823	124539078	chr8:124493823-124539078	1	-	124493828	124522976	789624	9	136,71,77,41,86,43,144,66,151,	0,1648,10447,14650,14779,21922,22063,29113,45104,
#Partially deleted in new
chr8	124495471	124539109	chr8:124495471-124539109	0	-	124518846	124539046	789624	9	71,77,41,86,43,144,64,66,85,	0,8799,13002,13131,20274,20415,23346,27465,43553,
#Partially deleted in new
chr8	124495517	124538469	chr8:124495517-124538469	0	-	124495517	124495517	8553170	10	25,73,41,86,43,144,64,50,66,139,	0,8757,12956,13085,20228,20369,23300,26633,27419,42813,
#Partially deleted in new
chr8	124503894	124522201	chr8:124503894-124522201	0	-	124503894	124503894	8553170	8	57,77,41,86,43,144,140,51,	0,376,4579,4708,11851,11992,14847,18256,
#Partially deleted in new
chr8	124504173	124539082	chr8:124504173-124539082	1	-	124504230	124539046	789624	9	174,41,86,43,144,64,50,66,58,	0,4300,4429,11572,11713,14644,17977,18763,34851,
#Partially deleted in new
chr8	124504270	124539072	chr8:124504270-124539072	0	-	124518782	124539046	789624	8	77,41,86,43,144,140,50,48,	0,4203,4332,11475,11616,14471,17880,34754,
#Partially deleted in new
chr8	124504270	124539094	chr8:124504270-124539094	0	-	124518846	124539046	789624	8	77,41,86,43,144,140,66,70,	0,4203,4332,11475,11616,14471,18666,34754,
#Partially deleted in new
chr8	124508473	124539037	chr8:124508473-124539037	0	-	124508473	124539037	789624	8	41,86,43,144,64,50,66,110,	0,129,7272,7413,10344,13677,14463,30454,
#Deleted in new
chr8	124508514	124508576	chr8:124508514-124508576	3	-	124508514	124508514	5263520	1	62,	0,
#Partially deleted in new
chr8	124508602	124539088	chr8:124508602-124539088	0	-	124518782	124522976	789624	7	86,43,144,140,50,66,161,	0,7143,7284,10139,13548,14334,30325,
#Partially deleted in new
chr8	124508606	124539056	chr8:124508606-124539056	0	-	124508606	124518878	789624	7	82,43,144,64,66,160,32,	0,7139,7280,10211,14330,18058,30418,
#Partially deleted in new
chr8	124508617	124539458	chr8:124508617-124539458	0	-	124508617	124539046	789624	4	71,43,144,434,	0,7128,7269,30407,
#Partially deleted in new
chr8	124515923	124523479	chr8:124515923-124523479	0	-	124515923	124515923	8553170	5	107,140,50,66,273,	0,2818,6227,7013,7283,
#Partially deleted in new
chr8	124521636	124539078	chr8:124521636-124539078	0	-	124521636	124521636	8553170	3	564,66,54,	0,1300,17388,
#Partially deleted in new
chr8	124539100	124580648	chr8:124539100-124580648	1	+	124539186	124579586	8553170	4	187,193,114,1071,	0,3986,7899,40477,
#Partially deleted in new
chr8	124539102	124549979	chr8:124539102-124549979	3	+	124539186	124549892	0	4	185,193,114,219,	0,3984,7897,10658,
#Partially deleted in new
chr8	124539130	124547438	chr8:124539130-124547438	1	+	124539186	124547242	789624	3	157,193,439,	0,3956,7869,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	124539139	124580648	chr8:124539139-124580648	0	+	124539186	124567904	789624	5	148,193,114,1268,1071,	0,3947,7860,28507,40438,
#Partially deleted in new
chr8	124539143	124549978	chr8:124539143-124549978	1	+	124539186	124549892	789624	4	144,160,114,218,	0,3976,7856,10617,
#Partially deleted in new
chr8	124542939	124549978	chr8:124542939-124549978	0	+	124542939	124542939	8553170	3	340,114,218,	0,4060,6821,
#Partially deleted in new
chr8	124546677	124549978	chr8:124546677-124549978	0	+	124546677	124546677	8553170	2	436,218,	0,3083,
#Deleted in new
chr8	124549773	124552318	chr8:124549773-124552318	0	+	124549773	124549773	8553170	3	60,58,202,	0,670,2343,
#Partially deleted in new
chr8	124550789	124728018	chr8:124550789-124728018	1	-	124552991	124727955	0	14	2903,163,174,120,211,98,108,158,75,92,85,74,62,135,	0,4952,5442,7923,11992,14872,16281,17589,34297,38830,40361,148736,153340,177094,
#Partially deleted in new
chr8	124550789	124728429	chr8:124550789-124728429	3	-	124552991	124727955	0	14	2903,163,174,195,211,98,108,158,75,92,85,74,62,546,	0,4952,5442,6891,11992,14872,16281,17589,34297,38830,40361,148736,153340,177094,
#Partially deleted in new
chr8	124550975	124556572	chr8:124550975-124556572	0	-	124550975	124550975	8553170	2	2717,831,	0,4766,
#Partially deleted in new
chr8	124552799	124565727	chr8:124552799-124565727	0	-	124552991	124565727	789624	7	893,163,174,195,120,211,66,	0,2942,3432,4881,5913,9982,12862,
#Partially deleted in new
chr8	124552812	124728273	chr8:124552812-124728273	1	-	124552991	124727955	0	15	880,163,174,195,211,98,108,158,12,75,92,85,74,62,390,	0,2929,3419,4868,9969,12849,14258,15566,27738,32274,36807,38338,146713,151317,175071,
#Partially deleted in new
chr8	124552887	124568841	chr8:124552887-124568841	1	-	124552991	124568396	0	8	805,163,123,211,98,108,158,45,	0,2854,3344,9894,12774,14183,15491,15909,
#Partially deleted in new
chr8	124552889	124563427	chr8:124552889-124563427	0	-	124552889	124552889	8553170	6	803,163,174,195,211,97,	0,2852,3342,4791,9892,10441,
#Partially deleted in new
chr8	124552901	124568804	chr8:124552901-124568804	1	-	124552991	124568666	789624	8	791,163,174,195,211,98,108,426,	0,2840,3330,4779,9880,12760,14169,15477,
#Partially deleted in new
chr8	124555798	124568538	chr8:124555798-124568538	0	-	124555798	124568538	789624	6	106,174,211,98,108,160,	0,433,6983,9863,11272,12580,
#Deleted in new
chr8	124555812	124557995	chr8:124555812-124557995	0	-	124555812	124555812	8553170	3	92,174,315,	0,419,1868,
#Partially deleted in new
chr8	124556260	124564802	chr8:124556260-124564802	0	-	124556260	124556260	8553170	4	94,195,211,59,	0,1420,6521,8483,
#Partially deleted in new
chr8	124557687	124568821	chr8:124557687-124568821	0	-	124557687	124568396	789624	6	188,211,98,108,158,25,	0,5094,7974,9383,10691,11109,
#Partially deleted in new
chr8	124562966	124566209	chr8:124562966-124566209	0	-	124562966	124562966	8553170	2	26,548,	0,2695,
#Partially deleted in new
chr8	124568427	124727616	chr8:124568427-124727616	0	-	124568427	124727616	789624	7	109,75,92,85,74,62,56,	0,16659,21192,22723,131098,135702,159133,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	124585086	124673513	chr8:124585086-124673513	0	-	124585086	124585086	8553170	4	75,92,85,317,	0,4533,6064,88110,
#Partially deleted in new
chr8	124589664	124619479	chr8:124589664-124619479	0	-	124589664	124589664	8553170	3	47,85,213,	0,1486,29602,
#Partially deleted in new
chr8	124698038	124727998	chr8:124698038-124727998	0	-	124698038	124698038	8553170	4	104,74,62,115,	0,1487,6091,29845,
#Partially deleted in new
chr8	124699089	124728018	chr8:124699089-124728018	0	-	124699089	124699089	8553170	3	510,62,135,	0,5040,28794,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	124811225	124848112	chr8:124811225-124848112	3	-	124811225	124811225	8553170	6	623,111,507,127,139,98,	0,851,4017,18878,28898,36789,
#Deleted in new
chr8	124821977	124822058	chr8:124821977-124822058	3	-	124821977	124821977	5263520	1	81,	0,
#Deleted in new
chr8	124821984	124822051	chr8:124821984-124822051	3	+	124821984	124821984	5263520	1	67,	0,
#Partially deleted in new
chr8	124834883	124857516	chr8:124834883-124857516	1	-	124834883	124834883	8553170	3	260,139,154,	0,5240,22479,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	124848736	124850217	chr8:124848736-124850217	0	+	124848736	124848736	8553170	3	85,62,473,	0,538,1008,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	124848765	124944612	chr8:124848765-124944612	3	+	124848765	124848765	8553170	6	56,62,209,85,114,46,	0,509,979,92697,94504,95801,
#Partially deleted in new
chr8	124920427	124922076	chr8:124920427-124922076	7	+	124920427	124920427	16724991	2	770,458,	0,1191,
#Partially deleted in new
chr8	124936523	124943765	chr8:124936523-124943765	3	-	124936523	124936523	8553170	3	277,140,70,	0,1184,7172,
#Partially deleted in new
chr8	124940348	124954328	chr8:124940348-124954328	0	+	124940348	124940348	8553170	3	21,85,389,	0,1114,13591,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	124942054	124951097	chr8:124942054-124951097	1	+	124942054	124942054	789624	4	670,2477,105,282,	0,1215,4000,8761,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	124942098	124945746	chr8:124942098-124945746	0	+	124942098	124942098	8553170	2	626,109,	0,3539,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	124944178	124951095	chr8:124944178-124951095	0	+	124944178	124944178	8553170	4	1568,105,250,280,	0,1876,3364,6637,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	124945011	124951096	chr8:124945011-124951096	0	+	124945011	124945011	8553170	4	40,109,105,281,	0,626,1043,5804,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	124945634	124951177	chr8:124945634-124951177	0	+	124945634	124945634	8553170	2	112,362,	0,5181,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	124945995	124951094	chr8:124945995-124951094	0	+	124945995	124945995	8553170	2	164,279,	0,4820,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	124973297	124979389	chr8:124973297-124979389	3	+	124975640	124977858	789624	3	119,114,3042,	0,2308,3050,
#Deleted in new
chr8	124996984	124998198	chr8:124996984-124998198	3	-	124996984	124996984	789624	2	176,236,	0,978,
#Partially deleted in new
chr8	124998496	125022281	chr8:124998496-125022281	1	+	124998599	125021945	789624	11	109,253,181,97,114,172,96,143,97,88,529,	0,4679,7028,8894,10474,10675,13040,19562,20134,22287,23256,
#Partially deleted in new
chr8	124998505	125022283	chr8:124998505-125022283	3	+	124999403	125021945	789624	11	1189,253,181,97,114,172,96,143,97,88,531,	0,4670,7019,8885,10465,10666,13031,19553,20125,22278,23247,
#Partially deleted in new
chr8	124998543	125005707	chr8:124998543-125005707	0	+	124999954	125005707	789624	4	103,172,253,183,	0,1356,4632,6981,
#Partially deleted in new
chr8	125009279	125020937	chr8:125009279-125020937	0	+	125009279	125020875	789624	5	64,96,143,97,154,	0,2257,8779,9351,11504,
#Partially deleted in new
chr8	125010944	125018107	chr8:125010944-125018107	0	+	125010944	125010944	8553170	2	688,49,	0,7114,
#Deleted in new
chr8	125017941	125019113	chr8:125017941-125019113	0	+	125017941	125017941	8553170	2	260,483,	0,689,
#Partially deleted in new
chr8	125024259	125091840	chr8:125024259-125091840	3	-	125024616	125083898	789624	29	414,88,154,97,130,104,80,103,163,125,180,102,81,141,111,76,167,113,130,128,172,114,153,193,101,85,146,310,226,	0,4360,7981,12977,14570,15535,19565,19732,20276,22947,24746,26304,31331,32417,33296,34962,35116,36822,39262,43332,48893,50738,52088,54478,57401,58123,58853,59453,67355,
#Partially deleted in new
chr8	125024259	125032714	chr8:125024259-125032714	0	-	125024259	125024259	8553170	3	414,88,474,	0,4360,7981,
#Partially deleted in new
chr8	125024266	125091783	chr8:125024266-125091783	1	-	125024616	125081734	789624	27	407,88,154,97,130,104,80,103,163,125,180,102,81,141,111,76,167,113,130,128,172,114,153,193,101,85,169,	0,4353,7974,12970,14563,15528,19558,19725,20269,22940,24739,26297,31324,32410,33289,34955,35109,36815,39255,43325,48886,50731,52081,54471,57394,58116,67348,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	125040683	125044989	chr8:125040683-125044989	3	+	125040683	125040683	8553170	2	96,491,	0,3815,
#Partially deleted in new
chr8	125044485	125049031	chr8:125044485-125049031	0	-	125044485	125044485	8553170	3	213,125,26,	0,2721,4520,
#Partially deleted in new
chr8	125075040	125091724	chr8:125075040-125091724	0	-	125075040	125081734	789624	7	71,153,193,101,85,146,110,	0,1307,3697,6620,7342,8072,16574,
#Partially deleted in new
chr8	125082421	125091819	chr8:125082421-125091819	0	-	125082421	125082421	8553170	4	46,146,64,205,	0,691,1291,9193,
#Partially deleted in new
chr8	125082432	125091790	chr8:125082432-125091790	0	-	125082432	125082432	8553170	4	35,146,188,176,	0,680,1402,9182,
#Deleted in new
chr8	125082885	125083856	chr8:125082885-125083856	0	-	125082885	125082885	8553170	2	373,144,	0,827,
#Partially deleted in new
chr8	125091678	125182256	chr8:125091678-125182256	0	+	125102330	125182256	789624	5	222,133,171,107,154,	0,10335,10638,59492,90424,
#Partially deleted in new
chr8	125091843	125357771	chr8:125091843-125357771	0	+	125102330	125357771	789624	7	115,133,171,107,154,101,60,	0,10170,10473,59327,90259,265375,265868,
#Partially deleted in new
chr8	125091843	125182519	chr8:125091843-125182519	1	+	125102330	125182312	789624	5	57,96,171,107,417,	0,10207,10473,59327,90259,
#Partially deleted in new
chr8	125091843	125182796	chr8:125091843-125182796	1	+	125102330	125182312	789624	5	115,96,171,107,694,	0,10207,10473,59327,90259,
#Partially deleted in new
chr8	125091852	125367120	chr8:125091852-125367120	3	+	125102330	125366885	0	8	106,96,171,107,154,101,107,353,	0,10198,10464,59318,90250,265366,265859,274915,
#Partially deleted in new
chr8	125091863	125102464	chr8:125091863-125102464	0	+	125102330	125102464	789624	4	95,66,96,148,	0,2604,10187,10453,
#Partially deleted in new
chr8	125091869	125367075	chr8:125091869-125367075	1	+	125102330	125366885	0	7	89,171,107,154,101,107,308,	0,10447,59301,90233,265349,265842,274898,
#Partially deleted in new
chr8	125091869	125151369	chr8:125091869-125151369	0	+	125091869	125091869	8553170	4	89,133,171,199,	0,10144,10447,59301,
#Partially deleted in new
chr8	125091878	125182271	chr8:125091878-125182271	0	+	125102330	125130298	789624	6	80,96,171,142,107,169,	0,10172,10438,38334,59292,90224,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	125102318	125156272	chr8:125102318-125156272	0	+	125102318	125102318	8553170	3	169,107,273,	0,48852,53681,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	125102357	125182430	chr8:125102357-125182430	0	+	125102357	125156047	789624	4	130,107,99,328,	0,48813,53642,79745,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	125270603	125270902	chr8:125270603-125270902	3	+	125270603	125270603	8553170	1	299,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	125348195	125351416	chr8:125348195-125351416	3	-	125348195	125348195	8553170	2	686,36,	0,3185,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	125363025	125367116	chr8:125363025-125367116	0	+	125363025	125363025	8553170	2	296,349,	0,3742,
#Deleted in new
chr8	125430320	125438405	chr8:125430320-125438405	3	+	125430902	125436471	0	3	942,293,2400,	0,2996,5685,
#Deleted in new
chr8	125432208	125436928	chr8:125432208-125436928	1	+	125433454	125436471	0	3	116,293,923,	0,1108,3797,
#Deleted in new
chr8	125432858	125433581	chr8:125432858-125433581	0	+	125432858	125432858	8553170	2	228,265,	0,458,
#Deleted in new
chr8	125433545	125437191	chr8:125433545-125437191	1	+	125436045	125436471	789624	2	223,1186,	0,2460,
#Partially deleted in new
chr8	125466938	125541373	chr8:125466938-125541373	3	+	125466938	125466938	8553170	4	95,179,183,173,	0,6197,73971,74262,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	125486679	125530605	chr8:125486679-125530605	1	+	125486679	125486679	8553170	3	280,327,665,	0,36007,43261,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	125749054	125750241	chr8:125749054-125750241	3	-	125749054	125749054	8553170	2	294,342,	0,845,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	125900950	125901054	chr8:125900950-125901054	3	+	125900950	125900950	8553170	1	104,	0,
#Partially deleted in new
chr8	125922307	125951150	chr8:125922307-125951150	0	-	125922307	125922307	8553170	3	240,94,237,	0,13932,28606,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	125922370	125951249	chr8:125922370-125951249	0	-	125922370	125922370	8553170	4	177,94,250,64,	0,13869,23562,28815,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	125922522	125951150	chr8:125922522-125951150	3	-	125922522	125922522	789624	4	25,94,250,237,	0,13717,23410,28391,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	125941128	125951189	chr8:125941128-125951189	1	-	125941128	125941128	789624	2	5054,276,	0,9785,
#Partially deleted in new
chr8	125951860	125952314	chr8:125951860-125952314	7	-	125951860	125951860	16724991	1	454,	0,
#Partially deleted in new
chr8	126072586	126074231	chr8:126072586-126074231	7	+	126072586	126072586	16724991	2	1141,237,	0,1408,
#Deleted in new
chr8	126073045	126073532	chr8:126073045-126073532	7	-	126073045	126073045	16724991	1	487,	0,
#Partially deleted in new
chr8	126174185	126175014	chr8:126174185-126175014	7	-	126174185	126174185	16724991	2	198,306,	0,523,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	126325494	126329535	chr8:126325494-126329535	3	+	126325494	126325494	789624	3	63,131,1228,	0,1761,2813,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	126474188	126492596	chr8:126474188-126492596	3	+	126474188	126474188	8553170	3	99,84,232,	0,13358,18176,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	126497384	126500440	chr8:126497384-126500440	3	+	126497384	126497384	8553170	3	826,123,564,	0,1630,2492,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	126498148	126500303	chr8:126498148-126500303	0	+	126498148	126498148	8553170	2	62,427,	0,1728,
#Partially deleted in new
chr8	126518697	126522351	chr8:126518697-126522351	3	+	126518697	126518697	8553170	3	187,91,151,	0,2202,3503,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	126552441	126558393	chr8:126552441-126558393	3	-	126556456	126557389	789624	2	5044,360,	0,5592,
#Partially deleted in new
chr8	126552814	126556419	chr8:126552814-126556419	0	-	126552814	126552814	8553170	2	689,155,	0,3450,
#Deleted in new
chr8	126556322	126557769	chr8:126556322-126557769	1	+	126556322	126556322	8553170	2	862,531,	0,916,
#Partially deleted in new
chr8	126557162	126618500	chr8:126557162-126618500	0	+	126557162	126557162	8553170	2	197,1112,	0,60226,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	126557874	126713415	chr8:126557874-126713415	1	+	126557874	126557874	8553170	5	57,99,58,230,130,	0,31317,149308,151043,155411,
#Partially deleted in new
chr8	126557885	126617741	chr8:126557885-126617741	0	+	126557885	126557885	8553170	3	46,99,353,	0,31306,59503,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	126557892	127292862	chr8:126557892-127292862	1	+	126557892	126557892	8553170	7	39,99,145,389,119,64,51,	0,31299,34381,155393,319779,448662,734919,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	126557894	126676413	chr8:126557894-126676413	1	+	126557894	126557894	8553170	4	37,99,174,62,	0,31297,108650,118457,
#Partially deleted in new
chr8	126557911	126634987	chr8:126557911-126634987	0	+	126557911	126557911	8553170	3	20,99,443,	0,31280,76633,
#Partially deleted in new
chr8	126582630	126583006	chr8:126582630-126583006	7	-	126582630	126582630	16724991	1	376,	0,
#Deleted in new
chr8	126671521	126671654	chr8:126671521-126671654	3	+	126671521	126671521	8553170	1	133,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	126713333	127292851	chr8:126713333-127292851	1	+	126713333	126713333	8553170	6	473,119,64,472,63,40,	0,164338,293221,299969,335904,579478,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	126766875	126790637	chr8:126766875-126790637	3	-	126766875	126766875	8553170	4	109,57,56,70,	0,1958,2524,23692,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	126823904	127007923	chr8:126823904-127007923	1	+	126823904	126823904	8553170	3	42,119,1369,	0,53767,182650,
#Partially deleted in new
chr8	126847042	126849388	chr8:126847042-126849388	1	+	126847042	126847042	8553170	3	46,143,295,	0,1477,2051,
#Partially deleted in new
chr8	126847051	127013713	chr8:126847051-127013713	1	+	126847051	126847051	8553170	5	37,119,106,64,411,	0,30620,31323,159503,166251,
#Partially deleted in new
chr8	126847080	126849556	chr8:126847080-126849556	0	+	126847080	126847080	8553170	2	8,463,	0,2013,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	126865907	127064901	chr8:126865907-127064901	3	+	126865907	126865907	8553170	5	446,119,82,64,854,	0,11764,60410,140647,198140,
#Partially deleted in new
chr8	126876890	127013620	chr8:126876890-127013620	0	+	126876890	126876890	8553170	5	354,119,106,64,318,	0,781,1484,129664,136412,
#Partially deleted in new
chr8	126876890	127399211	chr8:126876890-127399211	1	+	126876890	126876890	8553170	7	354,119,55,64,472,155,319,	0,781,61365,129664,136412,462390,522002,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	126878471	127020424	chr8:126878471-127020424	0	+	126878471	126878471	8553170	4	9,64,472,781,	0,128083,134831,141172,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	126927276	127020330	chr8:126927276-127020330	0	+	126927276	126927276	8553170	4	57,64,472,687,	0,79278,86026,92367,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	126973234	127064895	chr8:126973234-127064895	0	+	126973234	126973234	8553170	3	151,64,848,	0,33320,90813,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	126985963	127020423	chr8:126985963-127020423	1	+	126985963	126985963	8553170	4	86,64,472,780,	0,20591,27339,33680,
#Partially deleted in new
chr8	126990810	127064891	chr8:126990810-127064891	0	+	126990810	126990810	8553170	3	61,64,844,	0,15744,73237,
#Partially deleted in new
chr8	126990840	127051255	chr8:126990840-127051255	0	+	126990840	126990840	8553170	4	31,64,63,370,	0,15714,58397,60045,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	127009527	127020424	chr8:127009527-127020424	0	+	127009527	127009527	8553170	2	42,781,	0,10116,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	127072693	127082221	chr8:127072693-127082221	1	-	127072693	127072693	789624	4	225,85,164,101,	0,4132,6276,9427,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	127078438	127082282	chr8:127078438-127082282	0	-	127078438	127078438	8553170	2	695,162,	0,3682,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	127078894	127185243	chr8:127078894-127185243	2	-	127078894	127078894	8553170	2	239,417,	0,105932,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	127079873	127092600	chr8:127079873-127092600	3	+	127079873	127079873	789624	1	12727,	0,
#Deleted in new
chr8	127086262	127087510	chr8:127086262-127087510	7	-	127086262	127086262	16724991	1	1248,	0,
#Partially deleted in new
chr8	127152870	127203227	chr8:127152870-127203227	1	-	127152870	127152870	8553170	10	474,163,89,220,175,88,71,90,111,65,	0,9051,11567,16027,21319,34926,35174,44604,49171,50292,
#Partially deleted in new
chr8	127152870	127218968	chr8:127152870-127218968	0	-	127152870	127152870	8553170	7	474,163,220,175,111,58,159,	0,9051,16027,21319,49171,50292,65939,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	127152870	127188843	chr8:127152870-127188843	0	-	127152870	127152870	8553170	5	474,163,220,175,1059,	0,9051,16027,21319,34914,
#Partially deleted in new
chr8	127152876	127203166	chr8:127152876-127203166	0	-	127152876	127152876	8553170	5	468,175,100,71,4,	0,21313,34908,35168,50286,
#Partially deleted in new
chr8	127161578	127219237	chr8:127161578-127219237	0	-	127161578	127161578	8553170	3	506,220,428,	0,7319,57231,
#Partially deleted in new
chr8	127161583	127205432	chr8:127161583-127205432	1	-	127161583	127161583	8553170	9	501,89,220,175,100,71,111,58,86,	0,2854,7314,12606,26201,26461,40458,41579,43763,
#Partially deleted in new
chr8	127161823	127188120	chr8:127161823-127188120	0	-	127161823	127161823	8553170	5	261,220,175,100,76,	0,7074,12366,25961,26221,
#Partially deleted in new
chr8	127161833	127219118	chr8:127161833-127219118	0	-	127161833	127161833	8553170	6	251,175,100,71,58,304,	0,12356,25951,26211,41329,56981,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	127168137	127202237	chr8:127168137-127202237	1	-	127168137	127168137	8553170	3	980,175,196,	0,6052,33904,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	127168351	127174844	chr8:127168351-127174844	0	-	127168351	127168351	8553170	2	766,655,	0,5838,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	127168358	127223666	chr8:127168358-127223666	1	-	127168358	127168358	8553170	4	759,175,110,129,	0,5831,50451,55179,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	127168358	127224476	chr8:127168358-127224476	0	-	127168358	127168358	8553170	9	25,220,175,100,71,111,58,129,77,	0,539,5831,19426,19686,33683,34804,55179,56041,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	127168358	127188394	chr8:127168358-127188394	0	-	127168358	127168358	8553170	4	759,175,100,350,	0,5831,19426,19686,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	127168358	127197556	chr8:127168358-127197556	0	-	127168358	127168358	8553170	6	413,220,175,100,71,82,	0,539,5831,19426,19686,29116,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	127168358	127219260	chr8:127168358-127219260	0	-	127168358	127168358	8553170	4	759,175,58,451,	0,5831,34804,50451,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	127168358	127218995	chr8:127168358-127218995	0	-	127168358	127168358	8553170	8	25,220,175,100,71,90,58,186,	0,539,5831,19426,19686,29116,34804,50451,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	127168359	127203198	chr8:127168359-127203198	0	-	127168359	127168359	8553170	6	758,175,100,71,111,36,	0,5830,19425,19685,33682,34803,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	127168405	127205522	chr8:127168405-127205522	1	-	127168405	127168405	8553170	6	712,175,100,71,58,176,	0,5784,19379,19639,34757,36941,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	127168421	127218909	chr8:127168421-127218909	0	-	127168421	127168421	8553170	5	696,175,111,58,100,	0,5768,33620,34741,50388,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	127168421	127179838	chr8:127168421-127179838	0	-	127168421	127168421	8553170	3	696,175,198,	0,5768,11219,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	127168421	127218936	chr8:127168421-127218936	0	-	127168421	127168421	8553170	5	696,175,90,58,127,	0,5768,29053,34741,50388,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	127168421	127218931	chr8:127168421-127218931	0	-	127168421	127168421	8553170	7	696,175,944,100,71,111,122,	0,5768,16405,19363,19623,33620,50388,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	127168421	127205395	chr8:127168421-127205395	1	-	127168421	127168421	8553170	7	696,175,90,106,111,58,49,	0,5768,29053,32596,33620,34741,36925,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	127168421	127219220	chr8:127168421-127219220	0	-	127168421	127168421	8553170	2	696,411,	0,50388,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	127168421	127218931	chr8:127168421-127218931	0	-	127168421	127168421	8553170	3	696,175,122,	0,5768,50388,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	127168421	127205467	chr8:127168421-127205467	0	-	127168421	127168421	8553170	8	350,220,175,100,71,111,58,121,	0,476,5768,19363,19623,33620,34741,36925,
#Partially deleted in new
chr8	127168653	127188210	chr8:127168653-127188210	0	-	127168653	127168653	8553170	3	464,175,426,	0,5536,19131,
#Partially deleted in new
chr8	127168653	127203220	chr8:127168653-127203220	0	-	127168653	127168653	8553170	6	464,175,100,71,90,58,	0,5536,19131,19391,28821,34509,
#Partially deleted in new
chr8	127168673	127218935	chr8:127168673-127218935	0	-	127168673	127168673	8553170	6	444,175,100,71,58,126,	0,5516,19111,19371,34489,50136,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	127168675	127218968	chr8:127168675-127218968	1	-	127168675	127168675	8553170	8	442,175,944,100,71,111,58,154,	0,5514,16151,19109,19369,33366,34487,50139,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	127168698	127218842	chr8:127168698-127218842	1	-	127168698	127168698	8553170	9	419,175,944,100,71,90,111,58,33,	0,5491,16128,19086,19346,28776,33343,34464,50111,
#Partially deleted in new
chr8	127168707	127218969	chr8:127168707-127218969	0	-	127168707	127168707	8553170	7	410,175,100,71,73,58,160,	0,5482,19077,19337,21202,34455,50102,
#Partially deleted in new
chr8	127168707	127218968	chr8:127168707-127218968	0	-	127168707	127168707	8553170	5	410,175,100,71,159,	0,5482,19077,19337,50102,
#Partially deleted in new
chr8	127168707	127218968	chr8:127168707-127218968	1	-	127168707	127168707	8553170	9	410,175,100,71,182,90,111,58,159,	0,5482,19077,19337,22958,28767,33334,34455,50102,
#Partially deleted in new
chr8	127168707	127218870	chr8:127168707-127218870	0	-	127168707	127168707	8553170	6	410,175,100,71,58,56,	0,5482,19077,19337,34455,50107,
#Partially deleted in new
chr8	127168830	127206838	chr8:127168830-127206838	1	-	127168830	127168830	8553170	7	287,175,90,111,58,266,257,	0,5359,28644,33211,34332,36516,37751,
#Partially deleted in new
chr8	127168841	127219233	chr8:127168841-127219233	0	-	127168841	127168841	8553170	3	276,175,424,	0,5348,49968,
#Partially deleted in new
chr8	127179176	127218968	chr8:127179176-127218968	0	-	127179176	127179176	8553170	5	662,100,71,58,159,	0,8608,8868,23986,39633,
#Partially deleted in new
chr8	127179462	127218874	chr8:127179462-127218874	0	-	127179462	127179462	8553170	7	376,100,71,90,111,58,65,	0,8322,8582,18012,22579,23700,39347,
#Partially deleted in new
chr8	127179480	127219146	chr8:127179480-127219146	0	-	127179480	127179480	8553170	4	358,100,71,337,	0,8304,8564,39329,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	127180361	127209635	chr8:127180361-127209635	1	-	127180361	127180361	8553170	8	126,71,100,71,111,58,57,779,	0,5801,7423,7683,21680,22801,27784,28495,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	127184738	127218991	chr8:127184738-127218991	1	-	127184738	127184738	8553170	4	1032,100,71,182,	0,3046,3306,34071,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	127184749	127205511	chr8:127184749-127205511	0	-	127184749	127184749	8553170	5	1021,100,71,58,165,	0,3035,3295,18413,20597,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	127184749	127219395	chr8:127184749-127219395	1	-	127184749	127184749	8553170	5	1021,100,71,90,586,	0,3035,3295,12725,34060,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	127184754	127218967	chr8:127184754-127218967	0	-	127184754	127184754	8553170	6	1016,100,71,90,58,158,	0,3030,3290,12720,18408,34055,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	127184754	127205596	chr8:127184754-127205596	1	-	127184754	127184754	8553170	6	1016,100,71,111,58,250,	0,3030,3290,17287,18408,20592,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	127184754	127218968	chr8:127184754-127218968	0	-	127184754	127184754	8553170	5	1016,100,71,58,159,	0,3030,3290,18408,34055,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	127184755	127219123	chr8:127184755-127219123	1	-	127184755	127184755	8553170	6	1015,100,71,73,111,314,	0,3029,3289,5154,17286,34054,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	127184760	127190842	chr8:127184760-127190842	0	-	127184760	127184760	8553170	4	1010,100,71,933,	0,3024,3284,5149,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	127184760	127189103	chr8:127184760-127189103	0	-	127184760	127184760	8553170	2	1010,1319,	0,3024,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	127185016	127205716	chr8:127185016-127205716	1	-	127185016	127185016	8553170	7	754,100,71,90,111,58,370,	0,2768,3028,12458,17025,18146,20330,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	127185046	127218967	chr8:127185046-127218967	0	-	127185046	127185046	8553170	6	724,100,71,73,58,158,	0,2738,2998,4863,18116,33763,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	127185046	127201123	chr8:127185046-127201123	0	-	127185046	127185046	8553170	5	724,100,71,90,106,	0,2738,2998,12428,15971,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	127185046	127219127	chr8:127185046-127219127	1	-	127185046	127185046	8553170	6	724,100,71,111,58,318,	0,2738,2998,16995,18116,33763,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	127185046	127189052	chr8:127185046-127189052	0	-	127185046	127185046	8553170	3	724,100,1008,	0,2738,2998,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	127185046	127218968	chr8:127185046-127218968	0	-	127185046	127185046	8553170	7	724,100,71,90,111,58,159,	0,2738,2998,12428,16995,18116,33763,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	127185046	127192315	chr8:127185046-127192315	0	-	127185046	127185046	8553170	4	724,100,71,650,	0,2738,2998,6619,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	127185479	127188210	chr8:127185479-127188210	0	-	127185479	127185479	8553170	3	291,104,166,	0,2301,2565,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	127185528	127218888	chr8:127185528-127218888	1	-	127185528	127185528	8553170	8	705,100,71,73,90,111,58,79,	0,2256,2516,4381,11946,16513,17634,33281,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	127185528	127206123	chr8:127185528-127206123	0	-	127185528	127185528	8553170	8	242,100,71,73,90,111,58,777,	0,2256,2516,4381,11946,16513,17634,19818,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	127185528	127205569	chr8:127185528-127205569	0	-	127185528	127185528	8553170	5	705,100,71,58,223,	0,2256,2516,17634,19818,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	127185528	127224436	chr8:127185528-127224436	0	-	127185528	127185528	8553170	8	242,100,71,90,111,58,107,37,	0,2256,2516,11946,16513,17634,38009,38871,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	127185528	127218852	chr8:127185528-127218852	1	-	127185528	127185528	8553170	9	242,100,71,90,156,111,58,99,43,	0,2256,2516,11946,15489,16513,17634,19818,33281,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	127185589	127191258	chr8:127185589-127191258	0	-	127185589	127185589	8553170	5	181,100,71,73,417,	0,2195,2455,4320,5252,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	127185606	127218925	chr8:127185606-127218925	1	-	127185606	127185606	8553170	8	164,100,71,111,58,77,861,116,	0,2178,2438,16435,17556,22999,23250,33203,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	127186806	127202080	chr8:127186806-127202080	0	-	127186806	127186806	8553170	2	1078,39,	0,15235,
#Partially deleted in new
chr8	127187784	127208668	chr8:127187784-127208668	0	-	127187784	127187784	8553170	7	100,71,186,90,111,58,63,	0,260,3877,9690,14257,15378,20821,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	127204411	127219238	chr8:127204411-127219238	1	-	127204411	127204411	789624	2	5306,429,	0,14398,
#Partially deleted in new
chr8	127218930	127223666	chr8:127218930-127223666	0	-	127218930	127218930	8553170	2	36,129,	0,4607,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	127222313	127224476	chr8:127222313-127224476	1	-	127222313	127222313	8553170	2	1353,77,	0,2086,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	127222321	127227541	chr8:127222321-127227541	1	-	127222321	127222321	8553170	3	1345,150,143,	0,2213,5077,
#Deleted in new
chr8	127223007	127223666	chr8:127223007-127223666	0	-	127223007	127223007	8553170	2	227,129,	0,530,
#Partially deleted in new
chr8	127223246	127227541	chr8:127223246-127227541	0	-	127223246	127223246	8553170	3	398,150,23,	0,1288,4272,
#Partially deleted in new
chr8	127289816	127482139	chr8:127289816-127482139	3	-	127289816	127289816	789624	6	244,135,88,103,344,506,	0,131012,189266,189887,190911,191817,
#Partially deleted in new
chr8	127289817	127421374	chr8:127289817-127421374	0	-	127289817	127289817	8553170	2	243,546,	0,131011,
#Deleted in new
chr8	127292232	127292440	chr8:127292232-127292440	7	+	127292232	127292232	16724991	1	208,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	127292811	127339435	chr8:127292811-127339435	1	+	127292811	127292811	8553170	5	152,112,197,154,155,	0,8547,18708,29261,46469,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	127322182	127417210	chr8:127322182-127417210	3	+	127415866	127416946	789624	4	44,155,135,1768,	0,17098,92705,93260,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	127322203	127340717	chr8:127322203-127340717	1	+	127322203	127322203	8553170	2	23,1437,	0,17077,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	127322203	127346673	chr8:127322203-127346673	0	+	127322203	127322203	8553170	3	23,155,923,	0,17077,23547,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	127322204	127419050	chr8:127322204-127419050	1	+	127322204	127322204	8553170	9	22,155,126,225,112,279,135,230,278,	0,17076,76688,81375,82093,86548,92683,93238,96568,
#Partially deleted in new
chr8	127339146	127392634	chr8:127339146-127392634	0	+	127339146	127339146	8553170	2	289,131,	0,53357,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	127339279	127415022	chr8:127339279-127415022	0	+	127339279	127339279	8553170	4	156,126,279,135,	0,59613,69473,75608,
#Partially deleted in new
chr8	127339280	127394735	chr8:127339280-127394735	0	+	127339280	127339280	8553170	2	155,428,	0,55027,
#Deleted in new
chr8	127400398	127402150	chr8:127400398-127402150	3	+	127400398	127400398	789624	1	1752,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	127409025	127420066	chr8:127409025-127420066	1	+	127415866	127416946	789624	3	6,135,4624,	0,5862,6417,
#Partially deleted in new
chr8	127443349	127482139	chr8:127443349-127482139	0	-	127443349	127443349	789624	5	371,88,103,344,506,	0,35733,36354,37378,38284,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	127686342	127733967	chr8:127686342-127733967	1	-	127686342	127686342	8553170	3	3081,77,143,	0,5447,47482,
#Partially deleted in new
chr8	127730193	127733967	chr8:127730193-127733967	0	-	127730193	127730193	789624	2	729,143,	0,3631,
#Partially deleted in new
chr8	127735433	127740477	chr8:127735433-127740477	1	+	127738262	127740414	789624	3	1190,772,80,	0,2814,4964,
#Deleted in new
chr8	127735472	127735817	chr8:127735472-127735817	1	+	127735472	127735817	789624	1	345,	0,
#Deleted in new
chr8	127735518	127738772	chr8:127735518-127738772	0	+	127736593	127738772	789624	3	318,183,522,	0,922,2732,
#Deleted in new
chr8	127736045	127736612	chr8:127736045-127736612	1	+	127736045	127736612	789624	1	567,	0,
#Partially deleted in new
chr8	127736068	127741434	chr8:127736068-127741434	1	+	127736593	127740958	789624	3	555,772,1039,	0,2179,4327,
#Partially deleted in new
chr8	127736083	127741434	chr8:127736083-127741434	1	+	127738262	127740958	0	3	540,772,1039,	0,2164,4312,
#Partially deleted in new
chr8	127736219	127741372	chr8:127736219-127741372	1	+	127736593	127740958	789624	3	404,769,977,	0,2031,4176,
#Deleted in new
chr8	127736230	127738475	chr8:127736230-127738475	0	+	127738296	127738475	789624	2	393,184,	0,2061,
#Partially deleted in new
chr8	127736593	127740958	chr8:127736593-127740958	3	+	127736593	127740958	0	3	30,772,563,	0,1654,3802,
#Partially deleted in new
chr8	127794532	127890975	chr8:127794532-127890975	0	+	127794532	127794532	8553170	3	202,165,387,	0,60622,96056,
#Deleted in new
chr8	127794540	127794734	chr8:127794540-127794734	3	+	127794540	127794540	8553170	1	194,	0,
#Partially deleted in new
chr8	127794556	127940454	chr8:127794556-127940454	1	+	127794556	127794556	8553170	3	178,410,947,	0,96032,144951,
#Partially deleted in new
chr8	127794556	127855319	chr8:127794556-127855319	0	+	127794556	127794556	8553170	2	178,165,	0,60598,
#Partially deleted in new
chr8	127794556	127855319	chr8:127794556-127855319	0	+	127794556	127794556	8553170	3	178,115,165,	0,1337,60598,
#Partially deleted in new
chr8	127794559	127939609	chr8:127794559-127939609	0	+	127794559	127794559	8553170	3	175,115,102,	0,1334,144948,
#Partially deleted in new
chr8	127794574	127890952	chr8:127794574-127890952	1	+	127794574	127794574	8553170	3	160,414,364,	0,57359,96014,
#Partially deleted in new
chr8	127795753	127890932	chr8:127795753-127890932	0	+	127795753	127795753	8553170	2	255,344,	0,94835,
#Partially deleted in new
chr8	127795812	127890795	chr8:127795812-127890795	0	+	127795812	127795812	8553170	3	196,165,207,	0,59342,94776,
#Partially deleted in new
chr8	127795819	127890960	chr8:127795819-127890960	0	+	127795819	127795819	8553170	2	252,372,	0,94769,
#Deleted in new
chr8	127795961	127796028	chr8:127795961-127796028	3	+	127795961	127795961	5263520	1	67,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	127796032	127890983	chr8:127796032-127890983	1	+	127796032	127796032	8553170	3	39,410,395,	0,7117,94556,
#Partially deleted in new
chr8	127854727	127890741	chr8:127854727-127890741	0	+	127854727	127854727	8553170	2	68,153,	0,35861,
#Deleted in new
chr8	127855154	127855319	chr8:127855154-127855319	0	+	127855154	127855154	8553170	1	165,	0,
#Deleted in new
chr8	127890625	127890720	chr8:127890625-127890720	3	+	127890625	127890625	8553170	1	95,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	127890627	128101253	chr8:127890627-128101253	1	+	127890627	127890627	789624	8	371,169,301,130,113,137,204,274,	0,48880,93276,98534,179532,205890,208742,210352,
#Partially deleted in new
chr8	127890645	127932695	chr8:127890645-127932695	0	+	127890645	127890645	8553170	2	353,231,	0,41819,
#Partially deleted in new
chr8	127890676	127996650	chr8:127890676-127996650	0	+	127890676	127890676	8553170	3	322,130,90,	0,98485,105884,
#Partially deleted in new
chr8	127890869	127996650	chr8:127890869-127996650	0	+	127890869	127890869	8553170	4	129,169,130,90,	0,48638,98292,105691,
#Deleted in new
chr8	127939507	127939676	chr8:127939507-127939676	0	+	127939507	127939507	8553170	1	169,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	127946558	127948723	chr8:127946558-127948723	3	-	127946558	127946558	789624	1	2165,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	127946879	127948345	chr8:127946879-127948345	0	-	127946879	127946879	8553170	1	1466,	0,
#Deleted in new
chr8	127960632	127960695	chr8:127960632-127960695	3	+	127960632	127960632	5263520	1	63,	0,
#Deleted in new
chr8	127989161	127989291	chr8:127989161-127989291	0	+	127989161	127989161	8553170	1	130,	0,
#Partially deleted in new
chr8	127989183	128070272	chr8:127989183-128070272	0	+	127989183	127989183	8553170	3	108,162,113,	0,59264,80976,
#Partially deleted in new
chr8	127989216	128096578	chr8:127989216-128096578	0	+	127989216	127989216	8553170	4	75,162,113,58,	0,59231,80943,107304,
#Partially deleted in new
chr8	127989260	128096656	chr8:127989260-128096656	1	+	127989260	127989260	8553170	8	31,38,160,129,127,202,96,139,	0,7300,8939,20329,21057,80899,93492,107257,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	127999130	127999294	chr8:127999130-127999294	3	+	127999130	127999130	8553170	1	164,	0,
#Deleted in new
chr8	128008897	128008956	chr8:128008897-128008956	3	+	128008897	128008897	5263520	1	59,	0,
#Deleted in new
chr8	128010187	128010428	chr8:128010187-128010428	7	-	128010187	128010187	16724991	1	241,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	128010381	128010611	chr8:128010381-128010611	3	-	128010381	128010381	8553170	1	230,	0,
#Deleted in new
chr8	128049151	128049238	chr8:128049151-128049238	3	+	128049151	128049151	5263520	1	87,	0,
#Deleted in new
chr8	128070159	128070272	chr8:128070159-128070272	0	+	128070159	128070159	8553170	1	113,	0,
#Deleted in new
chr8	128096517	128096654	chr8:128096517-128096654	0	+	128096517	128096517	8553170	1	137,	0,
#Partially deleted in new
chr8	128096518	128099887	chr8:128096518-128099887	0	+	128096518	128096518	8553170	2	136,518,	0,2851,
#Deleted in new
chr8	128150115	128150188	chr8:128150115-128150188	3	+	128150115	128150115	5263520	1	73,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	128220503	128220803	chr8:128220503-128220803	3	+	128220503	128220503	8553170	1	300,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	128405268	128427916	chr8:128405268-128427916	1	-	128405268	128405268	8553170	6	1365,71,195,72,93,259,	0,1507,8945,16474,18232,22389,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	128406260	128415381	chr8:128406260-128415381	1	-	128406260	128406260	8553170	5	373,71,195,150,16,	0,515,7953,8280,9105,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	128559022	128561126	chr8:128559022-128561126	1	-	128559022	128559022	789624	3	554,309,57,	0,1217,2047,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	128559713	128561126	chr8:128559713-128561126	0	-	128559713	128559713	8553170	2	835,57,	0,1356,
#Partially deleted in new
chr8	128561005	128564679	chr8:128561005-128564679	0	-	128561005	128561005	8553170	2	121,451,	0,3223,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	128634198	128966001	chr8:128634198-128966001	1	-	128634198	128634198	8553170	4	19865,96,41,95,	0,173875,330331,331708,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	128904431	129575020	chr8:128904431-129575020	0	-	128904431	128904431	8553170	4	737,100,171,139,	0,197858,495082,670450,
#Duplicated in new
chr8	128904772	128966001	chr8:128904772-128966001	1	-	128904772	128904772	8553170	7	361,115,124,105,61,41,59,	0,12029,14106,15471,16050,59757,61170,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	128952876	128966001	chr8:128952876-128966001	0	-	128952876	128952876	789624	4	341,93,41,59,	0,2694,11653,13066,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	128991146	129575020	chr8:128991146-129575020	1	-	128991146	128991146	8553170	7	830,53,33,100,343,154,139,	0,26692,28251,111143,203093,408384,583735,
#Partially deleted in new
chr8	129216449	129575063	chr8:129216449-129575063	0	-	129216449	129216449	8553170	3	957,149,182,	0,6771,358432,
#Partially deleted in new
chr8	129216466	129241250	chr8:129216466-129241250	0	-	129216466	129216466	789624	3	940,149,74,	0,6754,24710,
#Deleted in new
chr8	129250966	129251138	chr8:129250966-129251138	7	+	129250966	129250966	16724991	1	172,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	129290982	129291275	chr8:129290982-129291275	3	+	129290982	129290982	8553170	1	293,	0,
#Partially deleted in new
chr8	129351690	129680239	chr8:129351690-129680239	1	-	129351690	129351690	789624	4	1290,71,48,312,	0,18616,128952,328237,
#Partially deleted in new
chr8	129351690	129575016	chr8:129351690-129575016	0	-	129351690	129351690	789624	3	1290,71,135,	0,18616,223191,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	129352428	129574991	chr8:129352428-129574991	0	-	129352428	129352428	789624	4	552,71,171,110,	0,17878,47085,222453,
#Partially deleted in new
chr8	129415948	129445852	chr8:129415948-129445852	3	+	129415948	129415948	8553170	3	79,55,147,	0,24025,29757,
#Deleted in new
chr8	129484056	129484142	chr8:129484056-129484142	3	-	129484056	129484056	5263520	1	86,	0,
#Partially deleted in new
chr8	129586131	129682087	chr8:129586131-129682087	0	-	129586131	129586131	8553170	3	891,122,241,	0,93796,95715,
#Partially deleted in new
chr8	129626901	129682095	chr8:129626901-129682095	1	-	129626901	129626901	8553170	4	1189,100,122,249,	0,41297,53026,54945,
#Partially deleted in new
chr8	129628690	129680049	chr8:129628690-129680049	2	-	129628690	129628690	8553170	2	555,122,	0,51237,
#Partially deleted in new
chr8	129679134	129683679	chr8:129679134-129683679	0	-	129679134	129679134	8553170	4	186,122,267,108,	0,793,2712,4437,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	129685400	129723023	chr8:129685400-129723023	3	-	129685400	129685400	8553170	8	8275,1868,179,74,98,52,135,47,	0,10043,15843,16410,20104,21154,21647,37576,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	129728743	129730445	chr8:129728743-129730445	7	+	129728743	129728743	16724991	3	564,221,337,	0,1047,1365,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr8	129748195	129786888	chr8:129748195-129786888	3	-	129748500	129777587	789624	14	545,74,130,140,27,30,42,123,45,106,166,184,224,878,	0,1256,1794,2235,3346,3666,3910,4502,12349,14430,17432,27906,29172,37815,
#Partially deleted in new
chr8	129748195	129752886	chr8:129748195-129752886	0	-	129748195	129748195	8553170	8	545,74,130,140,27,30,42,189,	0,1256,1794,2235,3346,3666,3910,4502,
#Partially deleted in new
chr8	129748196	129777587	chr8:129748196-129777587	1	-	129748500	129777587	789624	13	544,74,130,140,27,30,42,123,45,106,166,184,220,	0,1255,1793,2234,3345,3665,3909,4501,12348,14429,17431,27905,29171,
#Deleted in new
chr8	129751707	129752757	chr8:129751707-129752757	0	-	129751707	129751707	8553170	3	184,42,60,	0,398,990,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	129839592	129939832	chr8:129839592-129939832	1	-	129842141	129879461	789624	12	2613,71,127,80,117,78,137,106,122,83,39,225,	0,7211,9650,11242,12569,14673,16018,22636,31782,39796,63719,100015,
#Partially deleted in new
chr8	129841469	130016451	chr8:129841469-130016451	1	-	129842141	129879461	789624	15	736,71,127,80,117,78,137,106,122,83,106,39,87,53,82,	0,5334,7773,9365,10692,12796,14141,20759,29905,37919,55279,61842,63029,129473,174900,
#Partially deleted in new
chr8	129841469	130016672	chr8:129841469-130016672	3	-	129842141	129879461	789624	14	736,71,127,80,117,78,137,106,122,83,39,87,53,66,	0,5334,7773,9365,10692,12796,14141,20759,29905,37919,61842,63029,129473,175137,
#Partially deleted in new
chr8	129841469	129939754	chr8:129841469-129939754	1	-	129842141	129879461	789624	15	736,71,127,80,117,78,137,106,122,83,83,183,39,87,147,	0,5334,7773,9365,10692,12796,14141,20759,29905,37919,38906,55202,61842,63029,98138,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr8	129841469	130016697	chr8:129841469-130016697	0	-	129841469	129841469	8553170	11	736,71,3036,78,137,106,122,83,39,53,91,	0,5334,7773,12796,14141,20759,29905,37919,61842,129473,175137,
#Partially deleted in new
chr8	129841469	130016405	chr8:129841469-130016405	1	-	129842141	129879461	789624	14	736,71,127,80,117,78,137,106,122,83,183,39,53,36,	0,5334,7773,9365,10692,12796,14141,20759,29905,37919,55202,61842,129473,174900,
#Partially deleted in new
chr8	129841483	130016451	chr8:129841483-130016451	1	-	129842141	129879461	789624	13	722,71,127,80,117,78,137,106,122,83,39,53,82,	0,5320,7759,9351,10678,12782,14127,20745,29891,37905,61828,129459,174886,
#Partially deleted in new
chr8	129841483	129939694	chr8:129841483-129939694	1	-	129842141	129854343	789624	10	722,71,127,80,117,78,137,106,122,87,	0,5320,7759,9351,10678,12782,14127,20745,29891,98124,
#Partially deleted in new
chr8	129841496	129939872	chr8:129841496-129939872	1	-	129842141	129879461	789624	13	709,71,127,80,117,78,137,106,122,83,39,87,265,	0,5307,7746,9338,10665,12769,14114,20732,29878,37892,61815,63002,98111,
#Partially deleted in new
chr8	129841502	129939746	chr8:129841502-129939746	1	-	129842141	129854343	789624	11	703,71,127,80,117,78,137,122,39,87,139,	0,5301,7740,9332,10659,12763,14108,29872,61809,62996,98105,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	129842079	129847317	chr8:129842079-129847317	0	-	129842079	129842079	8553170	2	126,514,	0,4724,
#Partially deleted in new
chr8	129846824	129871436	chr8:129846824-129871436	1	-	129849288	129871436	789624	12	50,82,43,80,118,11,66,63,73,29,73,62,	0,2418,2502,4010,5337,7441,7453,8786,8850,15404,15438,24550,
#Partially deleted in new
chr8	129849291	129903351	chr8:129849291-129903351	1	-	129849291	129871436	789624	12	33,43,80,117,78,63,73,32,73,122,83,40,	0,35,1543,2870,4974,6319,6383,12937,12971,22083,30097,54020,
#Partially deleted in new
chr8	129850553	129862326	chr8:129850553-129862326	0	-	129850553	129850553	8553170	5	361,117,78,137,98,	0,1608,3712,5057,11675,
#Partially deleted in new
chr8	129855582	129970990	chr8:129855582-129970990	0	-	129855582	129879461	789624	8	165,106,122,83,39,87,46,48,	0,6646,15792,23806,47729,48916,56887,115360,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	129855610	130016665	chr8:129855610-130016665	0	-	129855610	129855610	8553170	7	137,106,39,87,102,53,296,	0,6618,47701,48888,93355,115332,160759,
#Partially deleted in new
chr8	129855687	130016637	chr8:129855687-130016637	0	-	129855687	129855687	8553170	8	60,106,122,39,87,46,53,31,	0,6541,15687,47624,48811,56782,115255,160919,
#Partially deleted in new
chr8	129855697	130016453	chr8:129855697-130016453	0	-	129855697	129855697	8553170	8	50,106,122,39,87,46,53,84,	0,6531,15677,47614,48801,56772,115245,160672,
#Partially deleted in new
chr8	129862228	129939763	chr8:129862228-129939763	0	-	129862228	129879461	789624	6	106,122,83,193,39,156,	0,9146,17160,17368,41083,77379,
#Partially deleted in new
chr8	129862233	130016637	chr8:129862233-130016637	0	-	129862233	129879461	789624	8	101,122,83,39,87,58,53,31,	0,9141,17155,41078,42265,50126,108709,154373,
#Partially deleted in new
chr8	129862249	130017129	chr8:129862249-130017129	0	-	129862249	129879461	789624	7	85,122,83,39,87,53,112,	0,9125,17139,41062,42249,108693,154768,
#Partially deleted in new
chr8	129862293	129939818	chr8:129862293-129939818	0	-	129862293	129879461	789624	6	41,122,83,83,39,211,	0,9081,17095,18082,41018,77314,
#Partially deleted in new
chr8	129862325	130016558	chr8:129862325-130016558	0	-	129862325	129879461	789624	7	9,122,83,78,39,53,189,	0,9049,17063,32161,40986,108617,154044,
#Deleted in new
chr8	129864477	129865052	chr8:129864477-129865052	7	+	129864477	129864477	16724991	1	575,	0,
#Deleted in new
chr8	129868589	129868716	chr8:129868589-129868716	3	-	129868589	129868589	8553170	1	127,	0,
#Partially deleted in new
chr8	129871374	130016463	chr8:129871374-130016463	0	-	129871374	129879461	789624	5	122,83,83,39,94,	0,8014,9001,31937,144995,
#Partially deleted in new
chr8	129871380	129970972	chr8:129871380-129970972	0	-	129871380	129879461	789624	6	116,83,193,39,87,30,	0,8008,8216,31931,33118,99562,
#Partially deleted in new
chr8	129871426	129939806	chr8:129871426-129939806	0	-	129871426	129879461	789624	6	70,83,83,39,87,199,	0,7962,8949,31885,33072,68181,
#Partially deleted in new
chr8	129871432	130016451	chr8:129871432-130016451	0	-	129871432	129879461	789624	6	64,83,39,46,53,82,	0,7956,31879,41037,99510,144937,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	129890464	129901758	chr8:129890464-129901758	3	+	129890464	129890464	8553170	2	191,276,	0,11018,
#Partially deleted in new
chr8	129902960	129939771	chr8:129902960-129939771	0	-	129902960	129902960	8553170	2	390,164,	0,36647,
#Partially deleted in new
chr8	129939855	129949394	chr8:129939855-129949394	3	+	129939855	129939855	8553170	4	63,140,150,196,	0,7968,8693,9343,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	129970508	130016652	chr8:129970508-130016652	0	-	129970508	129970508	8553170	2	487,46,	0,46098,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	129970675	130016556	chr8:129970675-130016556	0	-	129970675	129970675	8553170	2	320,187,	0,45694,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	130004527	130004601	chr8:130004527-130004601	3	-	130004527	130004527	8553170	1	74,	0,
#Deleted in new
chr8	130008333	130008453	chr8:130008333-130008453	3	-	130008333	130008333	5263520	1	120,	0,
#Partially deleted in new
chr8	130052103	130180862	chr8:130052103-130180862	0	-	130054730	130180862	789624	24	2702,123,491,59,70,171,229,108,68,116,86,187,92,134,164,49,88,70,101,9,87,76,86,112,	0,5850,8475,24244,27798,39869,59990,63524,64574,64776,66057,66385,71909,73852,75823,82192,84847,100632,107760,108681,115432,116888,127160,128647,
#Partially deleted in new
chr8	130052106	130443660	chr8:130052106-130443660	1	-	130054730	130361707	789624	31	2699,123,491,59,70,171,229,108,68,116,86,187,92,134,164,49,88,70,101,87,76,86,130,50,75,146,73,127,102,86,201,	0,5847,8472,24241,27795,39866,59987,63521,64571,64773,66054,66382,71906,73849,75820,82189,84844,100629,107757,115429,116885,127157,128644,135129,136002,162449,184815,305910,309563,349778,391353,
#Partially deleted in new
chr8	130052841	130443660	chr8:130052841-130443660	3	-	130054730	130401943	0	30	1964,123,491,59,70,171,229,108,68,116,86,187,92,134,164,49,88,70,101,87,76,86,130,50,75,146,73,127,86,201,	0,5112,7737,23506,27060,39131,59252,62786,63836,64038,65319,65647,71171,73114,75085,81454,84109,99894,107022,114694,116150,126422,127909,134394,135267,161714,184080,305175,349043,390618,
#Partially deleted in new
chr8	130052841	130401968	chr8:130052841-130401968	0	-	130361710	130401943	789624	30	1964,123,491,59,70,171,229,108,68,116,86,187,92,134,164,49,88,70,101,87,76,86,130,50,75,146,73,127,102,84,	0,5112,7737,23506,27060,39131,59252,62786,63836,64038,65319,65647,71171,73114,75085,81454,84109,99894,107022,114694,116150,126422,127909,134394,135267,161714,184080,305175,308828,349043,
#Partially deleted in new
chr8	130054740	130118522	chr8:130054740-130118522	0	-	130054740	130118522	789624	11	65,123,491,59,70,229,108,68,116,86,34,	0,3213,5838,21607,25161,57353,60887,61937,62139,63420,63748,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	130069540	130069652	chr8:130069540-130069652	3	-	130069540	130069540	8553170	1	112,	0,
#Partially deleted in new
chr8	130076396	130112414	chr8:130076396-130112414	0	-	130076396	130076396	8553170	4	10,70,171,321,	0,3505,15576,35697,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	130082737	130084768	chr8:130082737-130084768	3	-	130082737	130082737	789624	1	2031,	0,
#Partially deleted in new
chr8	130115576	130118779	chr8:130115576-130118779	0	-	130115576	130115576	8553170	5	159,68,116,86,291,	0,1101,1303,2584,2912,
#Partially deleted in new
chr8	130152604	130160063	chr8:130152604-130160063	0	-	130152604	130152604	8553170	2	201,200,	0,7259,
#Partially deleted in new
chr8	130152763	130340937	chr8:130152763-130340937	0	-	130152763	130152763	8553170	11	42,101,87,76,86,130,50,75,146,73,96,	0,7100,14772,16228,26500,27987,34472,35345,61792,84158,188078,
#Deleted in new
chr8	130162971	130163127	chr8:130162971-130163127	3	+	130162971	130162971	8553170	1	156,	0,
#Partially deleted in new
chr8	130179117	130236996	chr8:130179117-130236996	0	-	130179117	130179117	8553170	6	232,130,50,75,146,75,	0,1633,8118,8991,35438,57804,
#Partially deleted in new
chr8	130179334	130247042	chr8:130179334-130247042	0	-	130179334	130180834	789624	7	15,130,50,75,146,73,77,	0,1416,7901,8774,35221,57587,67631,
#Partially deleted in new
chr8	130180866	130427802	chr8:130180866-130427802	0	-	130361710	130401943	789624	9	14,50,75,146,73,127,102,86,69,	0,6369,7242,33689,56055,177150,180803,221018,246867,
#Partially deleted in new
chr8	130195112	130214624	chr8:130195112-130214624	0	-	130195112	130195112	8553170	3	260,117,69,	0,13517,19443,
#Partially deleted in new
chr8	130214617	130443537	chr8:130214617-130443537	0	-	130361710	130401943	789624	6	84,73,127,102,86,78,	0,22304,143399,147052,187267,228842,
#Partially deleted in new
chr8	130214644	130386877	chr8:130214644-130386877	0	-	130214644	130361707	789624	5	57,73,127,102,207,	0,22277,143372,147025,172026,
#Partially deleted in new
chr8	130360688	130401915	chr8:130360688-130401915	0	-	130360688	130360688	8553170	3	473,102,31,	0,981,41196,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	130595298	130655712	chr8:130595298-130655712	3	-	130595298	130595298	8553170	3	1693,225,154,	0,3548,60260,
#Partially deleted in new
chr8	130780300	131042426	chr8:130780300-131042426	3	-	130780389	131040333	789624	18	577,115,93,147,159,79,173,90,202,101,198,271,159,128,112,131,150,3053,	0,3390,5082,20125,33768,41041,55976,67123,69301,87545,104263,123471,129407,156772,163050,171567,210092,259073,
#Partially deleted in new
chr8	130780389	131040333	chr8:130780389-131040333	1	-	130780389	131040333	789624	15	488,115,93,147,159,79,173,198,271,159,128,112,131,150,960,	0,3301,4993,20036,33679,40952,55887,104174,123382,129318,156683,162961,171478,210003,258984,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	130892069	130892785	chr8:130892069-130892785	3	-	130892069	130892069	8553170	2	345,129,	0,587,
#Partially deleted in new
chr8	130903771	130990865	chr8:130903771-130990865	0	-	130903771	130951953	789624	7	271,159,128,112,131,104,23,	0,5936,33301,39579,48096,86667,87071,
#Partially deleted in new
chr8	130935408	130949665	chr8:130935408-130949665	3	+	130935408	130935408	8553170	3	130,124,157,	0,7896,14100,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	131130387	131144881	chr8:131130387-131144881	3	-	131130387	131130387	8553170	3	301,142,48,	0,688,14446,
#Partially deleted in new
chr8	131432775	131432869	chr8:131432775-131432869	3	-	131432775	131432775	8553170	1	94,	0,
#Deleted in new
chr8	131712511	131712980	chr8:131712511-131712980	7	+	131712511	131712511	16724991	1	469,	0,
#Partially deleted in new
chr8	131904087	132013642	chr8:131904087-132013642	3	+	131904312	132010895	789624	23	235,77,128,151,122,150,138,79,136,168,115,52,173,76,162,132,68,128,92,49,104,50,2853,	0,36411,40657,42395,45881,49730,51680,55497,64207,66388,71939,72953,74759,75258,80051,80841,82106,83487,92318,97671,98515,99148,106702,
#Partially deleted in new
chr8	131904108	131953836	chr8:131904108-131953836	0	+	131944765	131953836	789624	6	214,146,128,151,122,19,	0,36390,40636,42374,45860,49709,
#Partially deleted in new
chr8	131938224	132010895	chr8:131938224-132010895	1	+	131938224	132010895	789624	23	91,77,128,151,122,150,138,79,136,168,115,52,173,76,162,132,68,128,92,49,104,50,106,	0,2274,6520,8258,11744,15593,17543,21360,30070,32251,37802,38816,40622,41121,45914,46704,47969,49350,58181,63534,64378,65011,72565,
#Partially deleted in new
chr8	131939880	131944805	chr8:131939880-131944805	0	+	131944765	131944805	789624	3	339,77,61,	0,618,4864,
#Partially deleted in new
chr8	131939900	132013642	chr8:131939900-132013642	1	+	131944765	132010895	789624	23	44,77,128,151,122,150,138,79,136,168,115,52,173,76,162,132,68,128,92,49,104,50,2853,	0,598,4844,6582,10068,13917,15867,19684,28394,30575,36126,37140,38946,39445,44238,45028,46293,47674,56505,61858,62702,63335,70889,
#Partially deleted in new
chr8	131984138	132000956	chr8:131984138-132000956	0	+	131984138	131984138	8553170	6	162,132,68,128,92,188,	0,790,2055,3436,12267,16630,
#Partially deleted in new
chr8	131996389	132011079	chr8:131996389-132011079	0	+	131996389	131996389	8553170	6	108,230,49,104,50,290,	0,4379,5369,6213,6846,14400,
#Partially deleted in new
chr8	132000754	132011146	chr8:132000754-132011146	0	+	132000754	132000754	8553170	5	244,49,104,50,357,	0,1004,1848,2481,10035,
#Partially deleted in new
chr8	132024219	132059380	chr8:132024219-132059380	3	-	132024480	132055026	789624	14	557,107,172,126,54,51,42,129,113,175,57,66,93,40,	0,4853,7661,8819,10561,13218,14570,14775,16824,17305,20213,21598,30761,35121,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr8	132061485	132105265	chr8:132061485-132105265	1	-	132063994	132105265	789624	16	2553,83,154,75,69,246,249,87,57,84,84,84,81,60,60,79,	0,4400,9854,14569,14989,16240,18232,26167,26359,28030,34033,34217,37396,38589,42622,43701,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	132063784	132081104	chr8:132063784-132081104	0	-	132063784	132063784	8553170	7	254,83,154,75,69,246,1387,	0,2101,7555,12270,12690,13941,15933,
#Partially deleted in new
chr8	132069674	132111159	chr8:132069674-132111159	3	-	132070325	132105265	789624	17	706,154,75,69,246,249,87,57,84,84,84,81,60,73,95,100,65,	0,1665,6380,6800,8051,10043,17978,18170,19841,25844,26028,29207,30400,31526,34398,35512,41420,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr8	132120857	132481019	chr8:132120857-132481019	3	-	132129261	132480532	0	15	9139,85,99,132,103,203,27,95,96,111,156,173,127,91,873,	0,11322,13432,17027,19218,20271,42610,49476,51740,53381,54595,59299,63383,65233,359289,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr8	132120858	132187213	chr8:132120858-132187213	1	-	132129261	132187213	789624	16	9138,85,99,132,103,203,27,95,96,111,156,173,127,91,6,17,	0,11321,13431,17026,19217,20270,42609,49475,51739,53380,54594,59298,63382,65232,65705,66338,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr8	132126540	132321522	chr8:132126540-132321522	0	-	132141217	132321503	789624	15	3456,85,99,132,103,114,27,95,96,111,156,173,127,91,78,	0,5639,7749,11344,13535,14588,36927,43793,46057,47698,48912,53616,57700,59550,194904,
#Partially deleted in new
chr8	132128979	132447262	chr8:132128979-132447262	1	-	132129261	132447226	0	15	1017,85,99,132,103,203,27,95,96,111,156,173,127,91,62,	0,3200,5310,8905,11096,12149,34488,41354,43618,45259,46473,51177,55261,57111,318221,
#Partially deleted in new
chr8	132129089	132480578	chr8:132129089-132480578	1	-	132129261	132480532	789624	15	907,85,63,132,103,203,27,95,96,111,156,173,127,91,432,	0,3090,5236,8795,10986,12039,34378,41244,43508,45149,46363,51067,55151,57001,351057,
#Partially deleted in new
chr8	132129144	132480310	chr8:132129144-132480310	0	-	132129144	132129144	8553170	14	852,85,99,132,1256,27,95,96,111,156,173,127,91,164,	0,3035,5145,8740,10931,34323,41189,43453,45094,46308,51012,55096,56946,351002,
#Partially deleted in new
chr8	132129405	132321545	chr8:132129405-132321545	0	-	132129405	132321503	789624	15	591,85,99,132,103,203,27,95,96,111,156,173,127,91,101,	0,2774,4884,8479,10670,11723,34062,40928,43192,44833,46047,50751,54835,56685,192039,
#Partially deleted in new
chr8	132170396	132480309	chr8:132170396-132480309	0	-	132180314	132480309	789624	7	32,96,111,156,173,91,163,	0,2201,3842,5056,9760,15694,309750,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	132507961	132565246	chr8:132507961-132565246	3	-	132507961	132507961	8553170	6	214,267,65,64,124,1413,	0,7341,25154,52012,53492,55872,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	132560497	132561479	chr8:132560497-132561479	1	-	132560497	132560497	5263520	1	982,	0,
#Partially deleted in new
chr8	132571952	132661667	chr8:132571952-132661667	1	-	132572305	132661667	789624	12	528,86,96,70,60,78,183,224,173,78,168,10,	0,11741,38213,39341,43085,50658,53319,60787,65982,84877,89507,89705,
#Partially deleted in new
chr8	132571952	132675617	chr8:132571952-132675617	3	-	132572305	132675493	789624	12	528,86,96,70,60,78,183,224,173,78,168,134,	0,11741,38213,39341,43085,50658,53319,60787,65982,84877,89507,103531,
#Partially deleted in new
chr8	132572069	132675592	chr8:132572069-132675592	1	-	132572305	132675493	789624	12	411,82,100,70,60,78,183,224,173,78,168,109,	0,11624,38092,39224,42968,50541,53202,60670,65865,84760,89390,103414,
#Partially deleted in new
chr8	132572198	132675559	chr8:132572198-132675559	1	-	132578497	132675493	789624	13	282,109,82,91,70,60,78,183,224,173,78,168,76,	0,6209,11495,37963,39095,42839,50412,53073,60541,65736,84631,89261,103285,
#Partially deleted in new
chr8	132572198	132625387	chr8:132572198-132625387	0	-	132572305	132625387	789624	6	282,82,100,70,78,116,	0,11495,37963,39095,50412,53073,
#Partially deleted in new
chr8	132572200	132675559	chr8:132572200-132675559	1	-	132578497	132675493	789624	13	280,109,86,87,70,60,78,183,224,173,78,168,76,	0,6207,11493,37965,39093,42837,50410,53071,60539,65734,84629,89259,103283,
#Partially deleted in new
chr8	132572424	132622793	chr8:132572424-132622793	0	-	132572424	132572424	8553170	6	56,82,100,70,60,183,	0,11269,37737,38869,42613,50186,
#Partially deleted in new
chr8	132608404	132622688	chr8:132608404-132622688	0	-	132608436	132622688	789624	5	149,96,70,60,78,	0,1761,2889,6633,14206,
#Partially deleted in new
chr8	132625271	132675592	chr8:132625271-132675592	0	-	132625271	132625271	8553170	5	183,173,78,168,109,	0,12663,31558,36188,50212,
#Partially deleted in new
chr8	132625311	132675559	chr8:132625311-132675559	0	-	132625311	132625311	8553170	3	143,173,242,	0,12623,50006,
#Partially deleted in new
chr8	132637984	132675558	chr8:132637984-132675558	0	-	132643672	132675493	789624	6	123,41,63,78,168,75,	0,5389,5639,18845,23475,37499,
#Partially deleted in new
chr8	132638051	132675525	chr8:132638051-132675525	0	-	132638051	132638051	8553170	4	56,78,168,252,	0,18778,23408,37222,
#Partially deleted in new
chr8	132643379	132675580	chr8:132643379-132675580	0	-	132643379	132643379	8553170	4	307,78,168,97,	0,13450,18080,32104,
#Partially deleted in new
chr8	132685006	132727986	chr8:132685006-132727986	0	-	132687618	132727986	789624	4	99,194,76,189,	0,2455,37033,42791,
#Partially deleted in new
chr8	132685006	132702239	chr8:132685006-132702239	0	-	132685006	132685006	8553170	3	99,194,94,	0,2455,17139,
#Partially deleted in new
chr8	132709944	132760561	chr8:132709944-132760561	1	-	132710854	132758879	789624	9	1038,62,76,189,173,213,61,76,86,	0,4209,12095,17853,36997,41840,47289,48895,50531,
#Partially deleted in new
chr8	132709947	132760582	chr8:132709947-132760582	1	-	132710966	132758879	789624	10	1035,58,62,76,189,116,213,61,76,107,	0,4047,4206,12092,17850,36994,41837,47286,48892,50528,
#Partially deleted in new
chr8	132709947	132760582	chr8:132709947-132760582	3	-	132710966	132758879	789624	9	1035,58,62,76,173,213,61,76,107,	0,4047,4206,12092,36994,41837,47286,48892,50528,
#Partially deleted in new
chr8	132746947	132760630	chr8:132746947-132760630	0	-	132746947	132751807	789624	4	167,213,61,155,	0,4837,10286,13528,
#Partially deleted in new
chr8	132747013	132760630	chr8:132747013-132760630	0	-	132747013	132751807	789624	4	101,213,76,155,	0,4771,11826,13462,
#Partially deleted in new
chr8	132747043	132760576	chr8:132747043-132760576	0	-	132747043	132747043	8553170	6	71,213,61,68,76,101,	0,4741,10190,10939,11796,13432,
#Partially deleted in new
chr8	132751801	132760548	chr8:132751801-132760548	0	-	132751801	132758879	789624	5	196,61,76,150,73,	0,5432,7038,7496,8674,
#Partially deleted in new
chr8	132751823	132760582	chr8:132751823-132760582	0	-	132751823	132758879	789624	5	174,61,76,78,107,	0,5410,7016,8468,8652,
#Deleted in new
chr8	132758373	132760712	chr8:132758373-132760712	0	-	132758373	132758373	8553170	2	542,237,	0,2102,
#Partially deleted in new
chr8	132775357	132845923	chr8:132775357-132845923	1	+	132777828	132845923	789624	20	288,116,172,85,89,214,126,83,253,189,207,57,108,165,182,100,196,361,163,143,	0,2438,19052,19375,23414,28461,29257,35688,39279,41530,41981,48646,49906,56877,61182,62354,64029,67157,68798,70423,
#Partially deleted in new
chr8	132775357	132845923	chr8:132775357-132845923	1	+	132777828	132845923	0	21	288,116,172,85,89,78,214,126,83,253,189,207,57,108,165,182,100,196,361,163,143,	0,2438,19052,19375,23414,23737,28461,29257,35688,39279,41530,41981,48646,49906,56877,61182,62354,64029,67157,68798,70423,
#Partially deleted in new
chr8	132775371	132825334	chr8:132775371-132825334	0	+	132775371	132775371	8553170	13	274,116,172,85,89,90,214,126,83,253,189,207,1331,	0,2424,19038,19361,23400,23711,28447,29243,35674,39265,41516,41967,48632,
#Partially deleted in new
chr8	132775374	132818970	chr8:132775374-132818970	0	+	132775374	132775374	8553170	11	271,120,172,85,89,214,129,83,253,189,1632,	0,2417,19035,19358,23397,28444,29237,35671,39262,41513,41964,
#Partially deleted in new
chr8	132775374	132811888	chr8:132775374-132811888	1	+	132777828	132811134	789624	9	271,120,172,85,89,78,214,126,843,	0,2417,19035,19358,23397,23720,28444,29240,35671,
#Partially deleted in new
chr8	132775383	132848807	chr8:132775383-132848807	3	+	132777828	132845923	0	21	262,120,172,85,89,78,214,126,83,253,189,207,57,108,165,182,100,196,361,163,3027,	0,2408,19026,19349,23388,23711,28435,29231,35662,39253,41504,41955,48620,49880,56851,61156,62328,64003,67131,68772,70397,
#Partially deleted in new
chr8	132775397	132799960	chr8:132775397-132799960	1	+	132777828	132798914	789624	5	248,116,172,85,1189,	0,2398,19012,19335,23374,
#Partially deleted in new
chr8	132775399	132825341	chr8:132775399-132825341	0	+	132775399	132775399	8553170	14	246,120,172,85,89,78,214,126,83,253,189,207,57,307,	0,2392,19010,19333,23372,23695,28419,29215,35646,39237,41488,41939,48604,49635,
#Partially deleted in new
chr8	132775407	132812316	chr8:132775407-132812316	1	+	132777828	132811134	0	8	238,116,172,85,89,214,126,1271,	0,2388,19002,19325,23364,28411,29207,35638,
#Partially deleted in new
chr8	132775579	132812316	chr8:132775579-132812316	1	+	132777828	132811134	789624	9	66,120,172,85,89,90,214,129,1271,	0,2212,18830,19153,23192,23503,28239,29032,35466,
#Partially deleted in new
chr8	132777788	132798816	chr8:132777788-132798816	0	+	132794452	132798816	789624	5	123,196,172,85,45,	0,11015,16621,16944,20983,
#Partially deleted in new
chr8	132777791	132848807	chr8:132777791-132848807	1	+	132777828	132845923	789624	19	120,172,85,89,214,129,83,253,189,207,57,108,165,182,100,196,361,163,3027,	0,16618,16941,20980,26027,26820,33254,36845,39096,39547,46212,47472,54443,58748,59920,61595,64723,66364,67989,
#Partially deleted in new
chr8	132777822	132825337	chr8:132777822-132825337	0	+	132777828	132807748	789624	13	89,172,85,89,214,126,61,83,253,207,57,123,74,	0,16587,16910,20949,25996,26792,29900,33223,36814,39516,46181,47212,47441,
#Partially deleted in new
chr8	132799158	132811084	chr8:132799158-132811084	0	+	132799158	132804690	789624	4	14,214,160,39,	0,4660,5422,11887,
#Partially deleted in new
chr8	132803540	132813188	chr8:132803540-132813188	0	+	132803540	132803540	8553170	3	492,126,2143,	0,1074,7505,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	132806380	132825371	chr8:132806380-132825371	0	+	132806380	132806380	8553170	4	4748,2909,57,108,	0,8256,17623,18883,
#Deleted in new
chr8	132816783	132824057	chr8:132816783-132824057	0	+	132816783	132816783	8553170	3	293,207,54,	0,555,7220,
#Partially deleted in new
chr8	132817407	132847580	chr8:132817407-132847580	0	+	132817407	132825120	789624	11	138,57,123,108,165,182,100,196,361,163,1800,	0,6596,7627,7856,14827,19132,20304,21979,25107,26748,28373,
#Deleted in new
chr8	132826178	132826903	chr8:132826178-132826903	3	+	132826178	132826178	8553170	1	725,	0,
#Deleted in new
chr8	132836344	132837816	chr8:132836344-132837816	0	+	132836344	132836344	8553170	2	377,105,	0,1367,
#Deleted in new
chr8	132838116	132844298	chr8:132838116-132844298	3	-	132838116	132838116	8553170	3	498,215,73,	0,1049,6109,
#Deleted in new
chr8	132839207	132843088	chr8:132839207-132843088	1	-	132839207	132839207	8553170	2	173,697,	0,3184,
#Deleted in new
chr8	132841552	132847587	chr8:132841552-132847587	0	+	132841552	132841552	8553170	3	1323,163,1807,	0,2603,4228,
#Partially deleted in new
chr8	132866957	132881895	chr8:132866957-132881895	0	+	132867000	132868227	789624	6	110,140,98,204,160,33,	0,1157,2771,4390,6104,14905,
#Partially deleted in new
chr8	132866960	133134897	chr8:132866960-133134897	3	+	132867000	133134794	789624	48	107,109,98,204,160,107,144,186,1101,585,240,138,78,113,103,201,213,155,157,219,150,171,117,116,109,192,168,66,81,138,177,112,80,144,63,135,165,220,94,160,203,165,168,182,108,135,191,222,	0,1154,2768,4387,6101,14902,15508,15853,19487,21023,26729,30688,31208,31837,33276,34392,39727,41225,44416,46086,52415,56377,62115,66600,68795,74390,81815,94047,96033,99599,100833,102497,104833,105637,116389,144940,146639,150817,152641,155030,162860,228083,229245,246461,249648,264851,266509,267715,
#Deleted in new
chr8	132881871	132883240	chr8:132881871-132883240	0	+	132881871	132881871	8553170	3	98,144,427,	0,597,942,
#Partially deleted in new
chr8	132897688	133134897	chr8:132897688-133134897	0	+	132897688	132906840	789624	35	98,78,113,213,155,157,219,150,171,117,116,109,192,168,66,81,138,177,112,80,144,63,135,165,220,94,160,203,165,168,182,108,135,191,222,	0,480,1109,8999,10497,13688,15358,21687,25649,31387,35872,38067,43662,51087,63319,65305,68871,70105,71769,74105,74909,85661,114212,115911,120089,121913,124302,132132,197355,198517,215733,218920,234123,235781,236987,
#Deleted in new
chr8	132897733	132899000	chr8:132897733-132899000	0	+	132897733	132897733	8553170	3	53,78,203,	0,435,1064,
#Partially deleted in new
chr8	132897747	132906900	chr8:132897747-132906900	0	+	132897747	132906900	789624	6	39,78,113,103,132,213,	0,421,1050,2489,3674,8940,
#Partially deleted in new
chr8	132919439	133134827	chr8:132919439-133134827	0	+	132919439	133134794	789624	27	86,171,117,116,109,168,66,81,138,177,112,80,144,63,135,165,220,94,160,203,165,168,182,108,135,191,152,	0,3898,9636,14121,16316,29336,41568,43554,47120,48354,50018,52354,53158,63910,92461,94160,98338,100162,102551,110381,175604,176766,193982,197169,212372,214030,215236,
#Deleted in new
chr8	132962993	132967897	chr8:132962993-132967897	0	+	132962993	132967897	789624	2	81,104,	0,4800,
#Partially deleted in new
chr8	132964606	133134903	chr8:132964606-133134903	1	+	132964923	133134794	789624	19	327,138,177,112,80,144,135,165,220,94,160,203,165,168,182,108,135,191,228,	0,1953,3187,4851,7187,7991,47294,48993,53171,54995,57384,65214,130437,131599,148815,152002,167205,168863,170069,
#Partially deleted in new
chr8	132969457	133003256	chr8:132969457-133003256	0	+	132969457	132969457	8553170	5	112,80,144,63,277,	0,2336,3140,13892,33522,
#Partially deleted in new
chr8	132969485	132983753	chr8:132969485-132983753	0	+	132969485	132969485	8553170	4	84,80,144,404,	0,2308,3112,13864,
#Partially deleted in new
chr8	132971826	133003256	chr8:132971826-133003256	0	+	132971826	132971826	8553170	5	47,144,63,89,277,	0,771,11523,22889,31153,
#Partially deleted in new
chr8	132971850	133002285	chr8:132971850-133002285	0	+	132971850	132971850	8553170	4	23,144,63,513,	0,747,11499,29922,
#Partially deleted in new
chr8	132972260	133017967	chr8:132972260-133017967	0	+	132972260	132972260	8553170	6	116,144,63,135,165,190,	0,337,11089,39640,41339,45517,
#Partially deleted in new
chr8	132972631	133013683	chr8:132972631-133013683	0	+	132972631	132994765	789624	5	110,63,89,135,84,	0,10718,22084,39269,40968,
#Deleted in new
chr8	133002604	133003075	chr8:133002604-133003075	7	-	133002604	133002604	16724991	1	471,	0,
#Partially deleted in new
chr8	133017698	133029979	chr8:133017698-133029979	0	+	133017698	133029979	789624	4	168,94,160,159,	0,1903,4292,12122,
#Partially deleted in new
chr8	133036723	133103054	chr8:133036723-133103054	3	-	133038523	133060160	0	9	2014,133,132,104,87,100,101,278,502,	0,3274,8260,11106,13178,14092,23376,38129,65829,
#Partially deleted in new
chr8	133037638	133060358	chr8:133037638-133060358	1	-	133038523	133060280	0	7	1099,133,132,104,87,100,259,	0,2359,7345,10191,12263,13177,22461,
#Partially deleted in new
chr8	133037652	133102912	chr8:133037652-133102912	1	-	133038523	133102563	0	8	1085,133,132,104,87,100,101,360,	0,2345,7331,10177,12249,13163,22447,64900,
#Partially deleted in new
chr8	133038259	133040341	chr8:133038259-133040341	0	-	133038259	133038259	8553170	2	478,344,	0,1738,
#Partially deleted in new
chr8	133038366	133102628	chr8:133038366-133102628	1	-	133038523	133047857	0	7	371,133,132,104,87,100,76,	0,1631,6617,9463,11535,12449,64186,
#Partially deleted in new
chr8	133038426	133102612	chr8:133038426-133102612	1	-	133038523	133102563	0	7	311,133,104,87,100,101,60,	0,1571,9403,11475,12389,21673,64126,
#Partially deleted in new
chr8	133044991	133102477	chr8:133044991-133102477	0	-	133044991	133060160	789624	6	124,104,87,100,101,78,	0,2838,4910,5824,15108,57408,
#Deleted in new
chr8	133046480	133046581	chr8:133046480-133046581	3	-	133046480	133046480	5263520	1	101,	0,
#Partially deleted in new
chr8	133047104	133074959	chr8:133047104-133074959	0	-	133047104	133047104	8553170	5	829,87,100,101,97,	0,2797,3711,12995,27758,
#Partially deleted in new
chr8	133047845	133102628	chr8:133047845-133102628	0	-	133047845	133047845	8553170	5	88,87,100,278,76,	0,2056,2970,27007,54707,
#Partially deleted in new
chr8	133047907	133102663	chr8:133047907-133102663	0	-	133047907	133060160	789624	7	26,87,100,101,278,123,111,	0,1994,2908,12192,26945,39810,54645,
#Partially deleted in new
chr8	133048578	133102876	chr8:133048578-133102876	0	-	133048578	133048578	8553170	5	605,87,100,101,324,	0,1323,2237,11521,53974,
#Partially deleted in new
chr8	133048578	133074953	chr8:133048578-133074953	0	-	133048578	133048578	8553170	5	605,87,100,101,101,	0,1323,2237,11521,26274,
#Partially deleted in new
chr8	133049331	133075027	chr8:133049331-133075027	0	-	133049331	133049331	8553170	4	657,100,101,175,	0,1484,10768,25521,
#Partially deleted in new
chr8	133049926	133075035	chr8:133049926-133075035	0	-	133059085	133060160	789624	5	62,100,131,101,183,	0,889,9135,10173,24926,
#Partially deleted in new
chr8	133050209	133075022	chr8:133050209-133075022	0	-	133050209	133050209	8553170	3	706,101,170,	0,9890,24643,
#Partially deleted in new
chr8	133050209	133060288	chr8:133050209-133060288	0	-	133050209	133050209	8553170	2	706,189,	0,9890,
#Partially deleted in new
chr8	133050830	133102605	chr8:133050830-133102605	0	-	133050830	133060160	789624	5	85,101,69,278,53,	0,9269,13280,24022,51722,
#Partially deleted in new
chr8	133050855	133102542	chr8:133050855-133102542	0	-	133050855	133060160	789624	4	60,101,278,143,	0,9244,23997,51544,
#Partially deleted in new
chr8	133050891	133102610	chr8:133050891-133102610	0	-	133050891	133060160	789624	5	24,101,278,100,58,	0,9208,23961,25764,51661,
#Partially deleted in new
chr8	133060117	133102605	chr8:133060117-133102605	0	-	133060117	133060160	789624	4	83,149,278,53,	0,3462,14735,42435,
#Partially deleted in new
chr8	133063673	133102542	chr8:133063673-133102542	0	-	133063673	133063673	8553170	3	55,278,143,	0,11179,38726,
#Partially deleted in new
chr8	133072907	133076127	chr8:133072907-133076127	0	-	133072907	133072907	8553170	3	345,278,119,	0,1945,3101,
#Partially deleted in new
chr8	133074874	133102612	chr8:133074874-133102612	0	-	133074874	133074874	8553170	4	256,123,132,60,	0,12843,15109,27678,
#Partially deleted in new
chr8	133094622	133113496	chr8:133094622-133113496	0	+	133094622	133094622	8553170	3	586,168,75,	0,1583,18799,
#Partially deleted in new
chr8	133095158	133113668	chr8:133095158-133113668	0	+	133095158	133095158	8553170	3	50,168,247,	0,1047,18263,
#Partially deleted in new
chr8	133113502	133134891	chr8:133113502-133134891	0	+	133113502	133134794	789624	4	101,108,191,216,	0,3106,19967,21173,
#Deleted in new
chr8	133133386	133134877	chr8:133133386-133134877	0	+	133133386	133133386	8553170	2	274,202,	0,1289,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	133191038	133231690	chr8:133191038-133231690	3	+	133191144	133227710	789624	5	175,280,261,194,4280,	0,21825,29542,34351,36372,
#Partially deleted in new
chr8	133191038	133228360	chr8:133191038-133228360	0	+	133191144	133225431	789624	3	175,194,950,	0,34351,36372,
#Partially deleted in new
chr8	133191068	133227810	chr8:133191068-133227810	1	+	133191144	133227710	789624	2	145,400,	0,36342,
#Partially deleted in new
chr8	133191083	133227716	chr8:133191083-133227716	1	+	133191144	133227529	789624	3	130,280,306,	0,21780,36327,
#Partially deleted in new
chr8	133191136	133228064	chr8:133191136-133228064	1	+	133191144	133227710	789624	4	77,280,194,654,	0,21727,34253,36274,
#Partially deleted in new
chr8	133237170	133297237	chr8:133237170-133297237	1	-	133238877	133284311	789624	16	1949,52,36,48,52,57,104,57,87,61,63,121,106,36,81,104,	0,4852,7184,9445,10704,11544,13269,17368,19606,21195,21997,24876,27376,43061,47078,59963,
#Partially deleted in new
chr8	133237170	133297304	chr8:133237170-133297304	1	-	133238877	133262129	789624	15	1949,52,36,48,52,57,104,57,87,61,63,121,36,81,171,	0,4852,7184,9445,10704,11544,13269,17368,19606,21195,21997,24876,43061,47078,59963,
#Partially deleted in new
chr8	133237175	133297586	chr8:133237175-133297586	3	-	133238877	133284311	789624	16	1944,52,36,48,52,57,104,57,87,61,63,121,106,36,81,850,	0,4847,7179,9440,10699,11539,13264,17363,19601,21190,21992,24871,27371,43056,47073,59561,
#Partially deleted in new
chr8	133237175	133297252	chr8:133237175-133297252	0	-	133258421	133284311	789624	15	1944,52,36,48,52,57,104,57,87,61,63,121,36,81,119,	0,4847,7179,9440,10699,11539,13264,17363,19601,21190,21992,24871,43056,47073,59958,
#Partially deleted in new
chr8	133237175	133256228	chr8:133237175-133256228	0	-	133237175	133237175	8553170	8	1944,52,36,48,52,57,104,1690,	0,4847,7179,9440,10699,11539,13264,17363,
#Partially deleted in new
chr8	133237175	133244503	chr8:133237175-133244503	0	-	133237175	133237175	8553170	3	1944,52,149,	0,4847,7179,
#Partially deleted in new
chr8	133237175	133249488	chr8:133237175-133249488	0	-	133237175	133237175	8553170	7	1944,52,36,48,52,57,160,	0,4847,7179,9440,10699,11539,12153,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	133237175	133241527	chr8:133237175-133241527	0	-	133237175	133237175	8553170	2	354,2456,	0,1896,
#Partially deleted in new
chr8	133238537	133297237	chr8:133238537-133297237	1	-	133238877	133284311	789624	6	582,52,36,48,66,104,	0,3485,5817,8078,45726,58596,
#Partially deleted in new
chr8	133238697	133297252	chr8:133238697-133297252	1	-	133238877	133264553	789624	14	422,52,36,48,52,57,104,57,87,61,63,121,106,119,	0,3325,5657,7918,9177,10017,11742,15841,18079,19668,20470,23349,25849,58436,
#Partially deleted in new
chr8	133238766	133297252	chr8:133238766-133297252	1	-	133238877	133284311	789624	4	353,34,54,119,	0,3256,45509,58367,
#Deleted in new
chr8	133241873	133244660	chr8:133241873-133244660	0	-	133241873	133241873	8553170	2	201,306,	0,2481,
#Partially deleted in new
chr8	133241877	133250460	chr8:133241877-133250460	0	-	133241877	133241877	8553170	6	197,36,48,52,57,21,	0,2477,4738,5997,6837,8562,
#Partially deleted in new
chr8	133244379	133259446	chr8:133244379-133259446	0	-	133244379	133244379	8553170	10	11,48,52,57,104,57,87,61,63,44,	0,2236,3495,4335,6060,10159,12397,13986,14788,15023,
#Partially deleted in new
chr8	133246622	133297239	chr8:133246622-133297239	0	-	133255286	133284311	789624	14	41,52,57,104,57,131,87,61,63,121,106,36,81,106,	0,1252,2092,3817,7916,8647,10154,11743,12545,15424,17924,33609,37626,50511,
#Partially deleted in new
chr8	133246626	133254882	chr8:133246626-133254882	0	-	133246626	133246626	8553170	5	37,52,57,104,344,	0,1248,2088,3813,7912,
#Partially deleted in new
chr8	133256784	133302022	chr8:133256784-133302022	0	-	133256784	133302020	789624	8	79,61,63,121,106,36,81,35,	0,1581,2383,5262,7762,23447,27464,45203,
#Partially deleted in new
chr8	133256808	133297252	chr8:133256808-133297252	0	-	133256808	133256808	8553170	7	55,63,121,106,36,81,119,	0,2359,5238,7738,23423,27440,40325,
#Partially deleted in new
chr8	133256815	133297256	chr8:133256815-133297256	0	-	133256815	133264553	789624	7	48,61,63,121,106,36,123,	0,1550,2352,5231,7731,23416,40318,
#Partially deleted in new
chr8	133256818	133297958	chr8:133256818-133297958	0	-	133256818	133284311	789624	8	45,61,63,121,106,36,81,216,	0,1547,2349,5228,7728,23413,27430,40924,
#Partially deleted in new
chr8	133256839	133296555	chr8:133256839-133296555	0	-	133256839	133284311	789624	8	24,61,63,121,106,36,81,58,	0,1526,2328,5207,7707,23392,27409,39658,
#Partially deleted in new
chr8	133256839	133297092	chr8:133256839-133297092	0	-	133256839	133284311	789624	8	24,61,63,121,106,36,81,89,	0,1526,2328,5207,7707,23392,27409,40164,
#Partially deleted in new
chr8	133258378	133298458	chr8:133258378-133298458	0	-	133258378	133298392	789624	7	48,63,121,106,36,81,81,	0,789,3668,6168,21853,25870,39999,
#Partially deleted in new
chr8	133258415	133297252	chr8:133258415-133297252	0	-	133258415	133284311	789624	8	11,63,121,106,36,81,172,119,	0,752,3631,6131,21816,25833,29844,38718,
#Partially deleted in new
chr8	133258995	133264581	chr8:133258995-133264581	0	-	133258995	133258995	8553170	3	235,121,35,	0,3051,5551,
#Partially deleted in new
chr8	133259094	133262257	chr8:133259094-133262257	0	-	133259094	133259094	8553170	2	136,211,	0,2952,
#Partially deleted in new
chr8	133259217	133296536	chr8:133259217-133296536	0	-	133259217	133296507	789624	7	13,121,106,36,81,140,33,	0,2829,5329,21014,25031,25539,37286,
#Partially deleted in new
chr8	133262046	133297256	chr8:133262046-133297256	0	-	133262046	133264553	789624	6	121,106,36,95,81,123,	0,2500,18185,18914,22202,35087,
#Partially deleted in new
chr8	133262059	133264992	chr8:133262059-133264992	0	-	133262059	133262059	8553170	2	108,446,	0,2487,
#Deleted in new
chr8	133325996	133326404	chr8:133325996-133326404	7	+	133325996	133325996	16724991	1	408,	0,
#Deleted in new
chr8	133392210	133392690	chr8:133392210-133392690	7	-	133392210	133392210	16724991	1	480,	0,
#Deleted in new
chr8	133408005	133409107	chr8:133408005-133409107	7	+	133408005	133408005	16724991	1	1102,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	133454847	133571940	chr8:133454847-133571940	3	-	133459763	133476024	789624	10	5090,120,46,180,197,356,326,32,169,248,	0,7027,8566,9930,11046,20871,21430,89210,90910,116845,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	133454852	133571925	chr8:133454852-133571925	1	-	133459763	133476024	789624	9	5085,120,46,180,197,882,55,153,233,	0,7022,8561,9925,11041,20866,44282,90921,116840,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr8	133458872	133571887	chr8:133458872-133571887	1	-	133459763	133476024	789624	12	1065,120,46,180,197,356,323,55,123,93,153,195,	0,3002,4541,5905,7021,16846,17405,40262,48326,80764,86901,112820,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	133458944	133571849	chr8:133458944-133571849	1	-	133459763	133476024	789624	10	993,120,46,180,197,356,323,55,153,157,	0,2930,4469,5833,6949,16774,17333,40190,86829,112748,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	133464777	133499383	chr8:133464777-133499383	0	-	133464777	133466006	789624	3	180,197,249,	0,1116,34357,
#Partially deleted in new
chr8	133465641	133475934	chr8:133465641-133475934	0	-	133465641	133465641	8553170	2	449,216,	0,10077,
#Partially deleted in new
chr8	133475808	133489640	chr8:133475808-133489640	0	-	133475808	133476024	789624	2	792,103,	0,13729,
#Partially deleted in new
chr8	133475876	133489700	chr8:133475876-133489700	0	-	133475876	133476024	789624	3	198,323,163,	0,401,13661,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	133475883	133499361	chr8:133475883-133499361	0	-	133475883	133476024	789624	3	191,323,227,	0,394,23251,
#Partially deleted in new
chr8	133476028	133571888	chr8:133476028-133571888	0	-	133476028	133476028	8553170	3	572,153,196,	0,69745,95664,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	133488081	133489633	chr8:133488081-133489633	0	-	133488081	133488081	8553170	2	358,96,	0,1456,
#Partially deleted in new
chr8	133515505	133515745	chr8:133515505-133515745	7	+	133515505	133515505	16724991	1	240,	0,
#Partially deleted in new
chr8	133516183	133516268	chr8:133516183-133516268	7	+	133516183	133516183	16724991	1	85,	0,
#Partially deleted in new
chr8	133566981	133571746	chr8:133566981-133571746	0	-	133566981	133566981	8553170	2	339,54,	0,4711,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	133573182	133573861	chr8:133573182-133573861	3	+	133573182	133573182	8553170	1	679,	0,
#Deleted in new
chr8	133644597	133644725	chr8:133644597-133644725	3	-	133644597	133644597	8553170	1	128,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	133668419	133668701	chr8:133668419-133668701	3	-	133668419	133668419	8553170	1	282,	0,
#Deleted in new
chr8	133754810	133755450	chr8:133754810-133755450	7	+	133754810	133754810	16724991	1	640,	0,
#Deleted in new
chr8	133755844	133756646	chr8:133755844-133756646	7	+	133755844	133755844	16724991	1	802,	0,
#Partially deleted in new
chr8	133771408	133814537	chr8:133771408-133814537	3	+	133771408	133771408	8553170	3	154,103,309,	0,37273,42820,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	133775550	133777352	chr8:133775550-133777352	3	-	133775550	133775550	789624	3	841,146,54,	0,1419,1748,
#Deleted in new
chr8	133786092	133786268	chr8:133786092-133786268	7	-	133786092	133786092	16724991	1	176,	0,
#Partially deleted in new
chr8	133886495	133902407	chr8:133886495-133902407	3	+	133886495	133886495	789624	4	45,133,179,225,	0,11060,11542,15687,
#Deleted in new
chr8	133946676	133947335	chr8:133946676-133947335	7	+	133946676	133946676	16724991	1	659,	0,
#Partially deleted in new
chr8	133962991	133963259	chr8:133962991-133963259	7	-	133962991	133962991	16724991	1	268,	0,
#Partially deleted in new
chr8	134211864	134320447	chr8:134211864-134320447	3	-	134211864	134211864	8553170	2	342,84,	0,108499,
#Partially deleted in new
chr8	134477787	134696554	chr8:134477787-134696554	1	-	134478481	134657720	789624	14	934,119,139,89,174,150,88,233,1457,151,186,252,177,124,	0,43095,55046,87545,106044,110458,112480,122648,123689,130941,132682,159673,179773,218643,
#Partially deleted in new
chr8	134477791	134713038	chr8:134477791-134713038	1	-	134478481	134712863	0	16	930,131,127,119,139,89,174,150,88,233,1457,151,186,252,177,194,	0,31827,34683,43091,55042,87541,106040,110454,112476,122644,123685,130937,132678,159669,179769,235053,
#Partially deleted in new
chr8	134477791	134696558	chr8:134477791-134696558	1	-	134478596	134657720	789624	16	910,41,127,119,139,89,174,150,88,233,1457,151,186,252,177,128,	0,31917,34683,43091,55042,87541,106040,110454,112476,122644,123685,130937,132678,159669,179769,218639,
#Partially deleted in new
chr8	134477791	134713049	chr8:134477791-134713049	0	-	134565131	134712863	789624	17	930,131,127,119,139,166,89,174,150,88,233,1457,151,186,252,177,205,	0,31827,34683,43091,55042,87195,87541,106040,110454,112476,122644,123685,130937,132678,159669,179769,235053,
#Partially deleted in new
chr8	134478024	134565671	chr8:134478024-134565671	0	-	134478024	134478024	8553170	6	697,131,127,119,139,339,	0,31594,34450,42858,54809,87308,
#Partially deleted in new
chr8	134478024	134696554	chr8:134478024-134696554	1	-	134478481	134657720	0	16	697,131,127,119,139,89,174,150,88,233,1457,151,186,252,177,124,	0,31594,34450,42858,54809,87308,105807,110221,112243,122411,123452,130704,132445,159436,179536,218406,
#Partially deleted in new
chr8	134478221	134510182	chr8:134478221-134510182	0	-	134478481	134510182	789624	3	500,131,121,	0,31397,31840,
#Partially deleted in new
chr8	134478392	134712962	chr8:134478392-134712962	1	-	134478481	134712863	0	15	329,131,127,119,139,89,174,150,88,233,1457,151,252,177,118,	0,31226,34082,42490,54441,86940,105439,109853,111875,122043,123084,130336,159068,179168,234452,
#Deleted in new
chr8	134509700	134511082	chr8:134509700-134511082	0	-	134509700	134509700	8553170	2	49,387,	0,995,
#Partially deleted in new
chr8	134512573	134594885	chr8:134512573-134594885	0	-	134512573	134512573	8553170	8	28,119,139,89,174,150,88,79,	0,8309,20260,52759,71258,75672,77694,82233,
#Partially deleted in new
chr8	134583950	134600668	chr8:134583950-134600668	0	-	134599799	134600668	789624	5	55,150,88,133,233,	0,4295,6317,15779,16485,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	134597543	134696554	chr8:134597543-134696554	0	-	134597543	134597543	8553170	7	3125,1457,151,186,252,177,124,	0,3933,11185,12926,39917,60017,98887,
#Partially deleted in new
chr8	134598070	134600689	chr8:134598070-134600689	3	+	134598070	134598070	789624	2	505,434,	0,2185,
#Deleted in new
chr8	134598070	134598149	chr8:134598070-134598149	3	+	134598070	134598070	8553170	1	79,	0,
#Deleted in new
chr8	134598317	134598518	chr8:134598317-134598518	3	+	134598317	134598317	8553170	1	201,	0,
#Deleted in new
chr8	134600256	134600336	chr8:134600256-134600336	3	+	134600256	134600256	8553170	1	80,	0,
#Partially deleted in new
chr8	134602806	134637593	chr8:134602806-134637593	0	-	134602806	134602806	8553170	3	127,186,133,	0,7663,34654,
#Partially deleted in new
chr8	134608739	134639880	chr8:134608739-134639880	0	-	134608739	134639784	789624	4	140,186,252,106,	0,1730,28721,31035,
#Partially deleted in new
chr8	134608840	134696556	chr8:134608840-134696556	0	-	134608840	134657720	789624	4	39,252,177,126,	0,28620,48720,87590,
#Deleted in new
chr8	134673130	134673512	chr8:134673130-134673512	7	+	134673130	134673130	16724991	1	382,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	134722946	134723949	chr8:134722946-134723949	3	+	134722946	134722946	8553170	1	1003,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	134764808	134767276	chr8:134764808-134767276	3	+	134764808	134764808	8553170	1	2468,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	134783693	134785879	chr8:134783693-134785879	3	-	134783693	134783693	8553170	1	2186,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	134792019	134798272	chr8:134792019-134798272	3	-	134792019	134792019	8553170	1	6253,	0,
#Deleted in new
chr8	134800519	134800607	chr8:134800519-134800607	3	-	134800519	134800519	5263520	1	88,	0,
#Deleted in new
chr8	134804875	134804945	chr8:134804875-134804945	3	-	134804875	134804875	5263520	1	70,	0,
#Deleted in new
chr8	134832746	134834482	chr8:134832746-134834482	3	+	134832746	134832746	8553170	2	619,230,	0,1506,
#Partially deleted in new
chr8	134838068	134842637	chr8:134838068-134842637	3	+	134838068	134838068	789624	3	241,94,184,	0,4156,4385,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	134849934	134881899	chr8:134849934-134881899	3	+	134849934	134849934	789624	3	1696,97,303,	0,31249,31662,
#Deleted in new
chr8	134978826	134979279	chr8:134978826-134979279	7	-	134978826	134978826	16724991	1	453,	0,
#Partially deleted in new
chr8	135234130	135299719	chr8:135234130-135299719	3	+	135234130	135234130	789624	6	384,17,177,113,256,293,	0,53965,57045,59627,62366,65296,
#Partially deleted in new
chr8	135234235	135296555	chr8:135234235-135296555	0	+	135234235	135234235	8553170	4	279,177,113,59,	0,56940,59522,62261,
#Partially deleted in new
chr8	135234236	135296549	chr8:135234236-135296549	0	+	135234236	135234236	8553170	5	278,17,177,77,53,	0,53859,56939,59557,62260,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	135455864	135456952	chr8:135455864-135456952	3	-	135455864	135455864	8553170	3	166,64,88,	0,613,1000,
#Partially deleted in new
chr8	135457456	135647610	chr8:135457456-135647610	3	+	135457866	135647084	0	9	498,119,117,147,140,196,83,59,618,	0,63780,85197,91297,99991,124421,149498,187602,189536,
#Partially deleted in new
chr8	135458086	135607027	chr8:135458086-135607027	0	+	135458179	135607027	789624	7	97,119,117,147,140,196,73,	0,63150,84567,90667,99361,123791,148868,
#Partially deleted in new
chr8	135458546	135647610	chr8:135458546-135647610	1	+	135458903	135647084	789624	5	364,119,83,59,618,	0,62690,148408,186512,188446,
#Partially deleted in new
chr8	135458706	135557539	chr8:135458706-135557539	0	+	135458903	135557539	789624	5	204,119,117,147,92,	0,62530,83947,90047,98741,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	135538533	135549982	chr8:135538533-135549982	0	+	135538533	135538533	8553170	2	4237,1229,	0,10220,
#Partially deleted in new
chr8	135542673	135647419	chr8:135542673-135647419	0	+	135542673	135645067	789624	6	97,147,140,196,59,427,	0,6080,14774,39204,102385,104319,
#Partially deleted in new
chr8	135542702	135647026	chr8:135542702-135647026	0	+	135542702	135647026	789624	5	68,147,140,196,34,	0,6051,14745,39175,104290,
#Partially deleted in new
chr8	135557455	135656467	chr8:135557455-135656467	0	+	135557455	135557455	8553170	5	132,196,83,59,242,	0,24422,49499,91084,98770,
#Partially deleted in new
chr8	135593330	135647184	chr8:135593330-135647184	0	+	135593330	135593330	8553170	4	62,83,59,192,	0,13624,51728,53662,
#Partially deleted in new
chr8	135606955	135647258	chr8:135606955-135647258	0	+	135606955	135606955	8553170	2	82,115,	0,40188,
#Partially deleted in new
chr8	135607009	135656722	chr8:135607009-135656722	0	+	135607009	135647084	789624	5	28,59,150,59,497,	0,38049,39983,41530,49216,
#Deleted in new
chr8	135625184	135625981	chr8:135625184-135625981	7	-	135625184	135625184	16724991	1	797,	0,
#Partially deleted in new
chr8	135647734	135656513	chr8:135647734-135656513	0	+	135647734	135647734	8553170	3	387,59,288,	0,805,8491,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	135742342	135742495	chr8:135742342-135742495	3	-	135742342	135742342	8553170	1	153,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	135859368	135920578	chr8:135859368-135920578	0	+	135859368	135859368	8553170	3	151,76,872,	0,24335,60338,
#Partially deleted in new
chr8	135859368	136012187	chr8:135859368-136012187	1	+	135859368	135859368	8553170	4	151,76,327,192,	0,24335,60338,152627,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	135969365	136166980	chr8:135969365-136166980	0	+	135969365	135969365	8553170	6	58,192,59,122,219,353,	0,42630,193109,195856,196568,197262,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	136047020	136166122	chr8:136047020-136166122	0	+	136047020	136047020	8553170	4	185,59,122,189,	0,115454,118201,118913,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	136047046	136165995	chr8:136047046-136165995	0	+	136047046	136047046	8553170	5	159,171,59,122,62,	0,41989,115428,118175,118887,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	136047093	136302660	chr8:136047093-136302660	3	+	136047093	136047093	8553170	5	112,171,114,145,2728,	0,41942,151136,246156,252839,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	136047093	136202824	chr8:136047093-136202824	1	+	136047093	136047093	8553170	8	112,67,59,122,219,179,114,3569,	0,106666,115381,118128,118840,130905,151136,152162,
#Partially deleted in new
chr8	136237385	136241532	chr8:136237385-136241532	3	-	136237385	136237385	8553170	4	84,92,103,771,	0,170,1443,3376,
#Partially deleted in new
chr8	136464907	136731963	chr8:136464907-136731963	1	+	136464907	136464907	8553170	5	404,335,147,82,645,	0,51058,64887,72070,266411,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr8	136530770	137092183	chr8:136530770-137092183	1	+	136530770	136530770	8553170	9	236,82,55,97,94,112,118,94,843,	0,6207,259064,266503,366214,430969,543479,559639,560570,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	136530797	136897601	chr8:136530797-136897601	0	+	136530797	136530797	789624	6	209,82,55,97,94,169,	0,6180,259037,266476,366187,366635,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	136530808	136731619	chr8:136530808-136731619	0	+	136530808	136530808	8553170	3	198,82,301,	0,6169,200510,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	136536975	136798234	chr8:136536975-136798234	0	+	136536975	136536975	8553170	4	84,55,97,203,	0,252859,260298,261056,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	136780852	136810037	chr8:136780852-136810037	0	+	136780852	136780852	8553170	4	326,55,97,296,	0,8982,16421,28889,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	136789832	136815688	chr8:136789832-136815688	0	+	136789832	136789832	8553170	3	57,97,558,	0,7441,25298,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	136789833	136897601	chr8:136789833-136897601	1	+	136789833	136789833	8553170	5	56,97,71,94,169,	0,7440,98446,107151,107599,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	136797272	136984935	chr8:136797272-136984935	0	+	136797272	136797272	8553170	4	98,94,112,128,	0,99712,164467,187535,
#Deleted in new
chr8	137424903	137425021	chr8:137424903-137425021	7	-	137424903	137424903	16724991	1	118,	0,
#Partially deleted in new
chr8	137524754	137645564	chr8:137524754-137645564	3	-	137524754	137524754	8553170	4	1657,228,46,61,	0,2630,3765,120749,
#Deleted in new
chr8	137696723	137698467	chr8:137696723-137698467	7	+	137696723	137696723	16724991	1	1744,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	137809443	138083570	chr8:137809443-138083570	3	-	137809443	137809443	8553170	3	3491,166,514,	0,28276,273613,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	137852326	137929044	chr8:137852326-137929044	3	+	137852326	137852326	8553170	3	114,63,364,	0,4730,76354,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	138063267	138073240	chr8:138063267-138073240	3	+	138063267	138063267	8553170	2	256,340,	0,9633,
#Partially deleted in new
chr8	138130022	138496822	chr8:138130022-138496822	3	-	138132592	138367983	789624	20	2776,114,111,152,98,92,167,2023,155,74,156,50,154,127,174,71,140,80,96,152,	0,7124,8963,11175,12989,15936,18497,21171,37872,47324,48512,65235,67493,112919,120818,126666,135680,180818,237884,366648,
#Partially deleted in new
chr8	138132281	138477421	chr8:138132281-138477421	0	-	138367355	138367983	789624	21	517,114,111,152,98,92,167,2023,155,74,156,50,154,127,174,71,140,80,78,96,105,	0,4865,6704,8916,10730,13677,16238,18912,35613,45065,46253,62976,65234,110660,118559,124407,133421,178559,235051,235625,345035,
#Partially deleted in new
chr8	138132592	138496822	chr8:138132592-138496822	0	-	138145968	138367983	789624	20	206,114,111,152,98,92,63,2023,155,74,156,50,154,127,174,71,140,80,96,152,	0,4554,6393,8605,10419,13366,15927,18601,35302,44754,45942,62665,64923,110349,118248,124096,133110,178248,235314,364078,
#Partially deleted in new
chr8	138142859	138152404	chr8:138142859-138152404	0	-	138145968	138152404	789624	4	250,92,63,1211,	0,3099,5660,8334,
#Partially deleted in new
chr8	138250923	138425515	chr8:138250923-138425515	0	-	138250923	138367983	789624	6	91,71,140,80,96,80,	0,5765,14779,59917,116983,174512,
#Partially deleted in new
chr8	138265818	138477440	chr8:138265818-138477440	0	-	138265818	138265818	8553170	5	24,80,223,96,124,	0,45022,92519,102088,211498,
#Partially deleted in new
chr8	138308983	138459565	chr8:138308983-138459565	0	-	138308983	138367983	789624	4	49,80,96,459,	0,1857,58923,150123,
#Partially deleted in new
chr8	138436855	138477404	chr8:138436855-138477404	0	-	138436855	138436855	8553170	2	290,88,	0,40461,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	138436857	138477456	chr8:138436857-138477456	0	-	138436857	138436857	8553170	2	4927,140,	0,40459,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	138450496	138477428	chr8:138450496-138477428	0	-	138450496	138450496	8553170	2	315,112,	0,26820,
#Partially deleted in new
chr8	138588234	138913993	chr8:138588234-138913993	3	-	138589252	138883172	789624	65	1206,78,183,67,180,45,36,72,54,54,54,45,54,54,54,54,54,54,54,114,48,45,54,36,78,60,45,105,54,54,54,54,54,33,42,54,63,45,54,54,54,54,54,54,54,30,45,45,54,45,54,54,54,39,63,45,123,81,276,124,112,75,567,163,375,	0,3189,5782,8669,10484,13880,16499,18146,19701,25632,27766,28679,31220,35497,37955,42460,46775,48507,58394,61430,67662,72201,73795,75470,88323,91382,96190,96973,100682,102586,105411,106273,106591,111877,115071,127447,127992,128590,132504,133801,136380,137152,149289,163223,166922,167247,167550,172008,174178,187731,190118,191274,192692,208584,214637,219533,223564,224704,232901,238423,244804,255849,289515,294847,325384,
#Partially deleted in new
chr8	138588234	138722193	chr8:138588234-138722193	0	-	138588234	138588234	8553170	39	1206,78,183,67,180,45,36,72,54,54,54,45,54,54,54,54,54,54,54,114,48,45,54,36,78,45,105,54,54,54,54,54,33,42,54,63,45,54,46,	0,3189,5782,8669,10484,13880,16499,18146,19701,25632,27766,28679,31220,35497,37955,42460,46775,48507,58394,61430,67662,72201,73795,75470,88323,96190,96973,100682,102586,105411,106273,106591,111877,115071,127447,127992,128590,132504,133913,
#Partially deleted in new
chr8	138588896	138883211	chr8:138588896-138883211	1	-	138589252	138883172	789624	53	544,78,183,67,180,45,36,72,54,54,54,45,54,54,54,54,54,54,54,114,48,45,54,36,78,45,105,54,54,54,54,54,33,42,54,63,45,54,54,54,54,54,54,54,30,45,20,52,124,112,75,567,130,	0,2527,5120,8007,9822,13218,15837,17484,19039,24970,27104,28017,30558,34835,37293,41798,46113,47845,57732,60768,67000,71539,73133,74808,87661,95528,96311,100020,101924,104749,105611,105929,111215,114409,126785,127330,127928,131842,133139,135718,136490,148627,162561,166260,166585,166888,171346,232463,237761,244142,255187,288853,294185,
#Partially deleted in new
chr8	138607937	138620620	chr8:138607937-138620620	0	-	138607937	138607937	8553170	7	52,54,50,49,54,118,320,	0,5929,8063,8972,11517,12069,12363,
#Deleted in new
chr8	138777906	138779562	chr8:138777906-138779562	0	-	138778262	138779562	789624	2	500,54,	0,1602,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	138825718	138828105	chr8:138825718-138828105	0	-	138825718	138825718	8553170	4	292,124,175,70,	0,939,1455,2317,
#Partially deleted in new
chr8	138878132	138914006	chr8:138878132-138914006	0	-	138878132	138878132	8553170	2	184,388,	0,35486,
#Deleted in new
chr8	139096304	139102830	chr8:139096304-139102830	3	-	139096304	139096304	8553170	3	246,93,146,	0,3065,6380,
#Deleted in new
chr8	139108429	139108534	chr8:139108429-139108534	3	+	139108429	139108429	8553170	1	105,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	139114192	139127953	chr8:139114192-139127953	3	-	139114192	139114192	8553170	3	324,151,77,	0,7179,13684,
#Deleted in new
chr8	139508700	139508971	chr8:139508700-139508971	7	-	139508700	139508700	16724991	1	271,	0,
#Partially deleted in new
chr8	139600837	139703041	chr8:139600837-139703041	0	-	139618257	139702992	0	4	764,1338,842,332,	0,10499,17420,101872,
#Partially deleted in new
chr8	139600838	139702956	chr8:139600838-139702956	0	-	139618257	139702956	8553170	4	763,1338,2714,247,	0,10498,15547,101871,
#Partially deleted in new
chr8	139600844	139654350	chr8:139600844-139654350	0	-	139600844	139600844	8553170	4	757,1338,842,107,	0,10492,17413,53399,
#Partially deleted in new
chr8	139600844	139654330	chr8:139600844-139654330	0	-	139618257	139638053	8553170	5	757,1338,2714,31,87,	0,10492,15541,37178,53399,
#Deleted in new
chr8	139601077	139602064	chr8:139601077-139602064	0	-	139601077	139601077	8553170	2	524,52,	0,935,
#Partially deleted in new
chr8	139601096	139703093	chr8:139601096-139703093	3	-	139618257	139702992	789624	3	505,842,384,	0,17161,101613,
#Deleted in new
chr8	139612325	139616047	chr8:139612325-139616047	0	-	139612325	139612325	8553170	2	349,234,	0,3488,
#Partially deleted in new
chr8	139612560	139702998	chr8:139612560-139702998	1	-	139618257	139702992	0	3	114,842,289,	0,5697,90149,
#Partially deleted in new
chr8	139617120	139703056	chr8:139617120-139703056	1	-	139618257	139702992	0	2	1979,347,	0,85589,
#Partially deleted in new
chr8	139617120	139704109	chr8:139617120-139704109	1	-	139618257	139702992	789624	2	1979,1400,	0,85589,
#Partially deleted in new
chr8	139617158	139654330	chr8:139617158-139654330	1	-	139618257	139638053	8553170	3	1941,31,87,	0,20864,37085,
#Partially deleted in new
chr8	139617205	139633861	chr8:139617205-139633861	0	-	139617205	139617205	8553170	2	1894,144,	0,16512,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr8	139727724	140457762	chr8:139727724-140457762	3	-	139731060	140451373	789624	23	3504,224,91,154,111,143,125,153,164,133,127,86,146,127,144,217,126,122,27,129,146,594,124,	0,4254,158154,182422,261001,296212,493734,525052,547933,556164,559883,563268,572744,583523,632325,643239,669895,677852,698890,707387,711327,723065,729914,
#Partially deleted in new
chr8	139730342	140458579	chr8:139730342-140458579	1	-	139731060	140458564	789624	23	886,224,91,154,111,143,125,153,164,133,127,86,146,127,144,217,126,122,27,129,146,594,299,	0,1636,155536,179804,258383,293594,491116,522434,545315,553546,557265,560650,570126,580905,629707,640621,667277,675234,696272,704769,708709,720447,727938,
#Partially deleted in new
chr8	139730342	140457744	chr8:139730342-140457744	1	-	139731060	140451373	789624	23	886,224,91,154,111,143,125,153,164,133,127,86,146,127,144,217,126,122,27,129,146,594,106,	0,1636,155536,179804,258383,293594,491116,522434,545315,553546,557265,560650,570126,580905,629707,640621,667277,675234,696272,704769,708709,720447,727296,
#Partially deleted in new
chr8	139730344	140450930	chr8:139730344-140450930	0	-	139731060	140450930	789624	21	884,224,91,154,111,143,125,153,164,133,127,86,146,127,144,217,126,122,129,146,141,	0,1634,155534,179802,258381,293592,491114,522432,545313,553544,557263,560648,570124,580903,629705,640619,667275,675232,704767,708707,720445,
#Partially deleted in new
chr8	139730344	140458579	chr8:139730344-140458579	1	-	139731060	140451373	8553170	23	884,224,91,154,111,143,125,153,164,133,127,86,146,127,144,217,126,122,27,129,146,594,299,	0,1634,155534,179802,258381,293592,491114,522432,545313,553544,557263,560648,570124,580903,629705,640619,667275,675232,696270,704767,708707,720445,727936,
#Partially deleted in new
chr8	139730891	140291251	chr8:139730891-140291251	0	-	139730891	139730891	8553170	12	337,224,91,154,111,143,125,153,164,133,127,259,	0,1087,154987,179255,257834,293045,490567,521885,544766,552997,556716,560101,
#Partially deleted in new
chr8	139730995	139881295	chr8:139730995-139881295	0	-	139730995	139730995	8553170	3	233,224,208,	0,983,150092,
#Partially deleted in new
chr8	139731005	139806233	chr8:139731005-139806233	0	-	139731005	139731005	8553170	3	223,224,101,	0,973,75127,
#Partially deleted in new
chr8	139731043	139908758	chr8:139731043-139908758	0	-	139731043	139731043	8553170	3	185,224,142,	0,935,177573,
#Partially deleted in new
chr8	139732092	140008591	chr8:139732092-140008591	0	-	139732092	139732092	8553170	5	110,91,154,111,125,	0,153786,178054,256633,276374,
#Partially deleted in new
chr8	139732161	140082153	chr8:139732161-140082153	0	-	139732161	139732161	8553170	6	41,91,154,111,143,165,	0,153717,177985,256564,291775,349827,
#Partially deleted in new
chr8	139904431	139908695	chr8:139904431-139908695	0	-	139904431	139904431	8553170	2	479,79,	0,4185,
#Partially deleted in new
chr8	139914798	139916620	chr8:139914798-139916620	0	+	139914798	139914798	8553170	2	96,223,	0,1599,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	139931171	139933942	chr8:139931171-139933942	0	+	139931171	139931171	8553170	1	2771,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	139931171	139933946	chr8:139931171-139933946	3	+	139931171	139931171	8553170	1	2775,	0,
#Partially deleted in new
chr8	139988739	140238493	chr8:139988739-140238493	0	-	139988739	139988739	8553170	4	97,143,125,153,	0,35197,232719,249601,
#Partially deleted in new
chr8	139988822	140262731	chr8:139988822-140262731	0	-	139988822	139988822	8553170	5	14,143,125,153,125,	0,35114,232636,263954,273784,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	140039755	140041037	chr8:140039755-140041037	7	+	140039755	140039755	16724991	1	1282,	0,
#Deleted in new
chr8	140094893	140100543	chr8:140094893-140100543	3	-	140094893	140094893	789624	1	5650,	0,
#Partially deleted in new
chr8	140215909	140262730	chr8:140215909-140262730	0	-	140215909	140215909	8553170	4	145,125,153,124,	0,5549,36867,46697,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	140252570	140275753	chr8:140252570-140275753	0	-	140252750	140275753	789624	2	359,96,	0,23087,
#Partially deleted in new
chr8	140283986	140302835	chr8:140283986-140302835	0	-	140283986	140283986	8553170	5	35,127,86,146,151,	0,3621,7006,16482,18698,
#Partially deleted in new
chr8	140405292	140435197	chr8:140405292-140435197	0	-	140405292	140405292	8553170	2	406,86,	0,29819,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	140505812	140508043	chr8:140505812-140508043	3	-	140505812	140505812	8553170	1	2231,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	140511297	140517137	chr8:140511297-140517137	3	+	140511499	140515247	789624	3	349,127,2012,	0,3071,3828,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	140511310	140516467	chr8:140511310-140516467	1	+	140511499	140515149	789624	2	336,1342,	0,3815,
#Partially deleted in new
chr8	140511917	140515185	chr8:140511917-140515185	0	+	140511917	140514503	789624	2	108,817,	0,2451,
#Partially deleted in new
chr8	140511981	140515765	chr8:140511981-140515765	0	+	140511981	140515247	789624	3	44,127,640,	0,2387,3144,
#Deleted in new
chr8	140514293	140515541	chr8:140514293-140515541	0	+	140514293	140514293	8553170	2	202,416,	0,832,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr8	140520155	140635619	chr8:140520155-140635619	3	-	140532043	140635506	0	19	11997,200,102,135,195,91,160,185,134,123,120,148,88,135,137,182,121,193,135,	0,12260,15312,19164,21008,24057,27312,28958,31147,35740,36011,36933,38329,39239,40218,42297,52656,64963,115329,
#Partially deleted in new
chr8	140531420	140635546	chr8:140531420-140635546	1	-	140532043	140635506	0	18	732,200,135,195,91,160,185,134,123,120,148,88,135,137,182,121,193,62,	0,995,7899,9743,12792,16047,17693,19882,24475,24746,25668,27064,27974,28953,31032,41391,53698,104064,
#Partially deleted in new
chr8	140531420	140635546	chr8:140531420-140635546	0	-	140562555	140635506	789624	18	732,200,102,135,195,91,160,185,134,123,120,148,88,135,137,182,121,62,	0,995,4047,7899,9743,12792,16047,17693,19882,24475,24746,25668,27064,27974,28953,31032,41391,104064,
#Deleted in new
chr8	140532093	140532706	chr8:140532093-140532706	0	-	140532093	140532093	8553170	2	59,291,	0,322,
#Partially deleted in new
chr8	140532532	140541457	chr8:140532532-140541457	0	-	140532532	140532532	8553170	4	83,102,135,294,	0,2935,6787,8631,
#Partially deleted in new
chr8	140535390	140539449	chr8:140535390-140539449	0	-	140535390	140535390	8553170	2	179,130,	0,3929,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	140555407	140556238	chr8:140555407-140556238	0	-	140555407	140555407	8553170	2	611,72,	0,759,
#Partially deleted in new
chr8	140572141	140572812	chr8:140572141-140572812	3	-	140572141	140572141	8553170	1	671,	0,
#Partially deleted in new
chr8	140572557	140635546	chr8:140572557-140635546	0	-	140572557	140572557	8553170	4	46,121,193,62,	0,254,12561,62927,
#Partially deleted in new
chr8	140572901	140605888	chr8:140572901-140605888	0	-	140572901	140585195	789624	3	31,193,92,	0,12217,32895,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	140591683	140593201	chr8:140591683-140593201	3	+	140591683	140591683	8553170	1	1518,	0,
#Partially deleted in new
chr8	140626484	140635546	chr8:140626484-140635546	0	-	140626484	140626484	8553170	2	359,62,	0,9000,
#Partially deleted in new
chr8	140636280	140638283	chr8:140636280-140638283	3	+	140636280	140636280	8553170	1	2003,	0,
#Partially deleted in new
chr8	140657899	141001233	chr8:140657899-141001233	3	-	140659465	140890737	0	32	1779,81,156,107,40,63,132,138,87,112,205,90,101,116,101,85,98,57,53,31,118,108,78,141,55,63,80,88,167,227,89,109,	0,7017,10369,16398,17560,28732,42991,44670,48219,59698,77351,81118,85330,86752,88860,94332,103265,106334,131574,135454,142559,145643,160377,160980,172572,188360,188699,206412,221571,232643,267761,343225,
#Partially deleted in new
chr8	140658381	141001313	chr8:140658381-141001313	1	-	140659465	140890737	0	31	1297,81,156,107,40,63,132,87,112,205,90,101,116,101,85,98,57,53,31,118,108,78,141,55,63,80,88,167,227,89,189,	0,6535,9887,15916,17078,28250,42509,47737,59216,76869,80636,84848,86270,88378,93850,102783,105852,131092,134972,142077,145161,159895,160498,172090,187878,188217,205930,221089,232161,267279,342743,
#Partially deleted in new
chr8	140658388	140890768	chr8:140658388-140890768	0	-	140659465	140890768	789624	29	1290,81,156,107,40,63,132,87,112,205,90,101,116,101,85,98,57,53,31,118,108,78,141,55,63,80,88,167,226,	0,6528,9880,15909,17071,28243,42502,47730,59209,76862,80629,84841,86263,88371,93843,102776,105845,131085,134965,142070,145154,159888,160491,172083,187871,188210,205923,221082,232154,
#Partially deleted in new
chr8	140658401	140921219	chr8:140658401-140921219	1	-	140659465	140920913	789624	31	1277,81,156,107,40,63,132,138,87,112,205,90,101,116,101,85,98,57,53,31,118,108,78,141,55,63,80,88,167,227,406,	0,6515,9867,15896,17058,28230,42489,44168,47717,59196,76849,80616,84828,86250,88358,93830,102763,105832,131072,134952,142057,145141,159875,160478,172070,187858,188197,205910,221069,232141,262412,
#Partially deleted in new
chr8	140658401	140764523	chr8:140658401-140764523	1	-	140659465	140764351	789624	18	1277,81,156,107,40,63,132,138,87,112,205,90,101,116,101,85,98,290,	0,6515,9867,15896,17058,28230,42489,44168,47717,59196,76849,80616,84828,86250,88358,93830,102763,105832,
#Partially deleted in new
chr8	140658404	141001158	chr8:140658404-141001158	1	-	140659465	140890737	0	33	1274,81,156,9,107,70,63,132,138,87,112,205,90,101,116,101,85,98,57,53,31,118,108,78,141,55,63,80,88,167,227,89,34,	0,6512,9864,11322,15893,17025,28227,42486,44165,47714,59193,76846,80613,84825,86247,88355,93827,102760,105829,131069,134949,142054,145138,159872,160475,172067,187855,188194,205907,221066,232138,267256,342720,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	140658404	140670264	chr8:140658404-140670264	1	-	140659465	140668322	789624	3	1274,81,1996,	0,6512,9864,
#Partially deleted in new
chr8	140658404	141001379	chr8:140658404-141001379	0	-	140864393	140890737	789624	33	1274,81,156,9,107,40,63,132,138,87,112,205,90,101,116,101,85,98,21,57,18,53,31,118,108,78,141,55,63,80,88,227,255,	0,6512,9864,11322,15893,17055,28227,42486,44165,47714,59193,76846,80613,84825,86247,88355,93827,102760,103963,105829,111170,131069,134949,142054,145138,159872,160475,172067,187855,188194,205907,232138,342720,
#Partially deleted in new
chr8	140658404	140800546	chr8:140658404-140800546	0	-	140659465	140800546	789624	22	1274,81,156,107,40,63,132,138,87,112,205,90,101,116,101,85,98,21,57,53,31,88,	0,6512,9864,15893,17055,28227,42486,44165,47714,59193,76846,80613,84825,86247,88355,93827,102760,103963,105829,131069,134949,142054,
#Partially deleted in new
chr8	140658629	140954835	chr8:140658629-140954835	1	-	140659465	140920913	789624	32	1049,81,156,107,40,63,132,138,87,112,205,90,101,116,101,85,98,57,53,31,118,108,78,141,55,63,80,88,167,227,319,93,	0,6287,9639,15668,16830,28002,42261,43940,47489,58968,76621,80388,84600,86022,88130,93602,102535,105604,130844,134724,141829,144913,159647,160250,171842,187630,187969,205682,220841,231913,262184,296113,
#Partially deleted in new
chr8	140659070	140846290	chr8:140659070-140846290	0	-	140746841	140846290	789624	26	608,81,156,107,40,132,138,87,112,205,90,101,116,101,85,85,98,57,53,31,118,108,78,141,55,31,	0,5846,9198,15227,16389,41820,43499,47048,58527,76180,79947,84159,85581,87689,92832,93161,102094,105163,130403,134283,141388,144472,159206,159809,171401,187189,
#Partially deleted in new
chr8	140659072	140718734	chr8:140659072-140718734	1	-	140659465	140717669	789624	11	606,81,156,107,40,63,132,138,87,112,418,	0,5844,9196,15225,16387,27559,41818,43497,47046,58525,59244,
#Partially deleted in new
chr8	140659334	140800543	chr8:140659334-140800543	0	-	140659465	140800543	789624	24	344,81,156,9,107,40,63,132,138,87,112,205,90,101,116,101,85,98,57,18,84,53,31,85,	0,5582,8934,10392,14963,16125,27297,41556,43235,46784,58263,75916,79683,83895,85317,87425,92897,101830,104899,110240,111381,130139,134019,141124,
#Partially deleted in new
chr8	140659486	140663084	chr8:140659486-140663084	0	-	140659486	140662815	789624	2	192,437,	0,3161,
#Partially deleted in new
chr8	140668278	140686778	chr8:140668278-140686778	0	-	140668278	140668278	8553170	4	146,107,40,147,	0,6019,7181,18353,
#Partially deleted in new
chr8	140668288	140675779	chr8:140668288-140675779	0	-	140668288	140668288	8553170	4	136,9,107,320,	0,1438,6009,7171,
#Partially deleted in new
chr8	140686869	140702715	chr8:140686869-140702715	0	-	140686869	140686869	8553170	3	260,132,146,	0,14021,15700,
#Partially deleted in new
chr8	140700769	140706168	chr8:140700769-140706168	0	-	140700769	140700769	8553170	3	253,138,50,	0,1800,5349,
#Partially deleted in new
chr8	140700920	140721788	chr8:140700920-140721788	0	-	140700920	140717669	789624	5	102,138,87,112,130,	0,1649,5198,16677,20738,
#Partially deleted in new
chr8	140700923	140718355	chr8:140700923-140718355	0	-	140700923	140717669	789624	6	99,138,87,112,203,39,	0,1646,5195,16674,17085,17393,
#Partially deleted in new
chr8	140700942	140800549	chr8:140700942-140800549	0	-	140717665	140800549	789624	7	80,138,87,112,53,31,91,	0,1627,5176,16655,88531,92411,99516,
#Partially deleted in new
chr8	140702664	140718048	chr8:140702664-140718048	0	-	140702664	140717669	789624	3	43,87,451,	0,3454,14933,
#Partially deleted in new
chr8	140702697	140800543	chr8:140702697-140800543	0	-	140717665	140800543	789624	9	10,87,112,36,81,57,53,31,85,	0,3421,14900,32553,58484,61536,86776,90656,97761,
#Partially deleted in new
chr8	140706156	140764353	chr8:140706156-140764353	0	-	140735431	140764351	789624	5	49,112,205,98,120,	0,11441,29094,55008,58077,
#Partially deleted in new
chr8	140717688	140744803	chr8:140717688-140744803	0	-	140717688	140717688	8553170	5	21,205,90,101,152,	0,17562,21329,25541,26963,
#Deleted in new
chr8	140732563	140732653	chr8:140732563-140732653	3	-	140732563	140732563	5263520	1	90,	0,
#Partially deleted in new
chr8	140735044	140744702	chr8:140735044-140744702	0	-	140735044	140735044	8553170	4	411,90,101,51,	0,3973,8185,9607,
#Partially deleted in new
chr8	140743236	140764413	chr8:140743236-140764413	1	-	140744693	140764351	789624	5	94,116,85,98,180,	0,1415,8995,17928,20997,
#Partially deleted in new
chr8	140743289	140764419	chr8:140743289-140764419	0	-	140746857	140764351	789624	5	41,116,101,98,186,	0,1362,3470,17875,20944,
#Partially deleted in new
chr8	140744684	140764421	chr8:140744684-140764421	0	-	140744684	140764351	789624	6	83,101,85,98,21,188,	0,2075,7547,16480,17683,19549,
#Partially deleted in new
chr8	140744696	140799297	chr8:140744696-140799297	0	-	140744696	140744696	8553170	8	71,101,85,98,57,53,31,78,	0,2063,7535,16468,19537,44777,48657,54523,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	140744700	140747272	chr8:140744700-140747272	0	-	140744700	140744700	8553170	2	67,513,	0,2059,
#Partially deleted in new
chr8	140744746	140770966	chr8:140744746-140770966	0	-	140744746	140744746	8553170	7	21,101,98,21,57,18,251,	0,2013,16418,17621,19487,24828,25969,
#Partially deleted in new
chr8	140746449	140764401	chr8:140746449-140764401	0	-	140746449	140746449	8553170	4	411,85,98,168,	0,5782,14715,17784,
#Partially deleted in new
chr8	140746833	140765236	chr8:140746833-140765236	0	-	140746833	140746833	8553170	6	27,85,98,21,57,265,	0,5398,14331,15534,17400,18138,
#Partially deleted in new
chr8	140750202	140764260	chr8:140750202-140764260	0	-	140750202	140750202	8553170	5	207,85,98,21,27,	0,2029,10962,12165,14031,
#Partially deleted in new
chr8	140752231	140771444	chr8:140752231-140771444	0	-	140752231	140752231	8553170	6	85,98,57,18,84,165,	0,8933,12002,17343,18484,19048,
#Partially deleted in new
chr8	140818983	141001260	chr8:140818983-141001260	0	-	140818983	140890737	789624	5	37,55,80,227,136,	0,11488,27615,71559,182141,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	140820598	140822414	chr8:140820598-140822414	3	-	140820598	140820598	8553170	1	1816,	0,
#Partially deleted in new
chr8	140830475	141000926	chr8:140830475-141000926	0	-	140864393	140890737	789624	6	51,63,80,88,227,47,	0,15784,16123,33836,60067,170404,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	140846606	141001167	chr8:140846606-141001167	0	-	140864393	140890737	789624	5	72,88,227,58,43,	0,17705,43936,102059,154518,
#Partially deleted in new
chr8	140846648	141001164	chr8:140846648-141001164	0	-	140846648	140879529	789624	6	30,88,167,61,188,40,	0,17663,32822,43894,78913,154476,
#Partially deleted in new
chr8	140846658	140934560	chr8:140846658-140934560	0	-	140846658	140890737	789624	5	20,88,167,227,68,	0,17653,32812,43884,87834,
#Partially deleted in new
chr8	140879161	141001284	chr8:140879161-141001284	1	-	140879466	140890737	789624	3	476,227,160,	0,11381,121963,
#Partially deleted in new
chr8	140879440	141000937	chr8:140879440-141000937	1	-	140879466	140890737	789624	4	197,227,89,58,	0,11102,46220,121439,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	140879470	140984039	chr8:140879470-140984039	0	-	140879470	140890737	789624	5	167,227,89,69,198,	0,11072,46190,47875,104371,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	140879475	140983994	chr8:140879475-140983994	0	-	140879475	140890737	789624	3	162,227,153,	0,11067,104366,
#Partially deleted in new
chr8	140879479	141002110	chr8:140879479-141002110	0	-	140879479	140890737	789624	4	158,227,89,97,	0,11063,46181,122534,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	140879481	141001285	chr8:140879481-141001285	0	-	140879481	140890737	789624	4	156,227,58,161,	0,11061,69184,121643,
#Partially deleted in new
chr8	140879511	140934590	chr8:140879511-140934590	0	-	140879511	140890737	789624	4	126,227,89,98,	0,11031,46149,54981,
#Partially deleted in new
chr8	140890315	140921009	chr8:140890315-140921009	0	-	140890315	140890315	8553170	2	454,196,	0,30498,
#Partially deleted in new
chr8	140890542	141001266	chr8:140890542-141001266	0	-	140890542	140890737	789624	4	227,73,188,142,	0,19006,35019,110582,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	140890583	141001266	chr8:140890583-141001266	0	-	140890583	140890737	789624	4	186,89,58,142,	0,35077,58082,110541,
#Partially deleted in new
chr8	140920869	141001177	chr8:140920869-141001177	0	-	140920869	140920913	789624	3	263,188,53,	0,4692,80255,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	140920889	141001164	chr8:140920889-141001164	0	-	140920889	140920913	789624	4	243,89,58,40,	0,4771,27776,80235,
#Partially deleted in new
chr8	140925587	141001122	chr8:140925587-141001122	0	-	140925587	140925587	8553170	2	162,243,	0,75292,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	140925688	141002216	chr8:140925688-141002216	0	-	140925688	140925688	8553170	3	61,314,203,	0,58153,76325,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	140940561	140940663	chr8:140940561-140940663	7	+	140940561	140940561	16724991	1	102,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	141055289	141060596	chr8:141055289-141060596	3	+	141055289	141055289	8553170	5	148,182,56,59,619,	0,1952,3163,3631,4688,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	141059331	141060468	chr8:141059331-141060468	0	+	141059331	141059331	8553170	2	68,491,	0,646,
#Partially deleted in new
chr8	141117277	141141276	chr8:141117277-141141276	0	+	141136607	141141276	789624	4	87,283,116,74,	0,19231,20744,23925,
#Partially deleted in new
chr8	141126043	141128121	chr8:141126043-141128121	1	-	141126043	141126043	8553170	2	428,55,	0,2023,
#Partially deleted in new
chr8	141126290	141129961	chr8:141126290-141129961	3	-	141126290	141126290	8553170	2	181,324,	0,3347,
#Partially deleted in new
chr8	141128611	141141455	chr8:141128611-141141455	1	+	141128707	141141328	789624	4	198,283,116,253,	0,7897,9410,12591,
#Partially deleted in new
chr8	141128620	141195796	chr8:141128620-141195796	3	+	141136646	141194233	789624	23	189,234,116,122,112,120,219,122,156,97,104,200,522,260,171,130,108,140,161,134,119,138,1764,	0,7937,9401,12582,15527,22213,22998,27228,32011,34712,36565,37569,39383,46579,47970,49446,52126,56518,60365,61663,63710,63905,65412,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	141128620	141142511	chr8:141128620-141142511	0	+	141128707	141136659	789624	4	189,234,116,1309,	0,7937,9401,12582,
#Partially deleted in new
chr8	141128637	141195808	chr8:141128637-141195808	1	+	141128707	141194233	789624	23	172,283,116,122,112,120,219,122,156,97,104,200,522,260,171,130,108,140,161,134,119,138,1776,	0,7871,9384,12565,15510,22196,22981,27211,31994,34695,36548,37552,39366,46562,47953,49429,52109,56501,60348,61646,63693,63888,65395,
#Partially deleted in new
chr8	141128648	141151837	chr8:141128648-141151837	0	+	141128707	141151837	789624	5	161,283,116,120,219,	0,7860,9373,22185,22970,
#Partially deleted in new
chr8	141128674	141150908	chr8:141128674-141150908	0	+	141128707	141150908	789624	7	135,283,116,122,112,63,75,	0,7834,9347,12528,15473,21611,22159,
#Partially deleted in new
chr8	141128778	141195808	chr8:141128778-141195808	0	+	141128778	141194233	789624	22	31,283,116,122,112,120,219,122,97,104,200,522,260,171,130,108,140,161,134,119,138,1776,	0,7730,9243,12424,15369,22055,22840,27070,34554,36407,37411,39225,46421,47812,49288,51968,56360,60207,61505,63552,63747,65254,
#Partially deleted in new
chr8	141136625	141195511	chr8:141136625-141195511	1	+	141136646	141194233	789624	21	166,116,122,112,120,219,122,97,104,200,522,260,171,130,108,140,161,134,119,138,1479,	0,1396,4577,7522,14208,14993,19223,26707,28560,29564,31378,38574,39965,41441,44121,48513,52360,53658,55705,55900,57407,
#Partially deleted in new
chr8	141141202	141143008	chr8:141141202-141143008	0	+	141141202	141142486	789624	2	122,709,	0,1097,
#Partially deleted in new
chr8	141143913	141150889	chr8:141143913-141150889	0	+	141143913	141143913	8553170	2	346,56,	0,6920,
#Partially deleted in new
chr8	141155893	141166233	chr8:141155893-141166233	0	+	141155893	141155893	8553170	4	77,156,104,44,	0,4738,9292,10296,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	141157394	141176266	chr8:141157394-141176266	0	+	141157394	141157394	8553170	6	893,97,104,200,522,1067,	0,5938,7791,8795,10609,17805,
#Deleted in new
chr8	141173504	141176652	chr8:141173504-141176652	0	+	141173504	141173504	8553170	3	237,260,62,	0,1695,3086,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	141177086	141185223	chr8:141177086-141185223	0	+	141177086	141177086	8553170	3	1110,108,85,	0,3660,8052,
#Partially deleted in new
chr8	141178120	141185458	chr8:141178120-141185458	0	+	141178120	141185323	789624	3	76,108,320,	0,2626,7018,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	141184487	141195807	chr8:141184487-141195807	0	+	141184487	141184487	8553170	5	791,161,134,119,3282,	0,4498,5796,7843,8038,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	141188348	141195802	chr8:141188348-141195802	1	+	141188991	141194233	789624	5	798,134,119,138,1770,	0,1935,3982,4177,5684,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	141188897	141190624	chr8:141188897-141190624	0	+	141188897	141188897	8553170	2	249,341,	0,1386,
#Partially deleted in new
chr8	141191273	141195799	chr8:141191273-141195799	0	+	141191273	141191273	8553170	2	1390,1767,	0,2759,
#Deleted in new
chr8	141191273	141192901	chr8:141191273-141192901	0	+	141191273	141191273	8553170	2	1176,376,	0,1252,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	141192330	141193070	chr8:141192330-141193070	0	+	141192330	141192918	789624	2	119,545,	0,195,
#Partially deleted in new
chr8	141207165	141228570	chr8:141207165-141228570	1	-	141212190	141228266	789624	7	5391,212,100,1019,180,189,392,	0,8593,9924,10845,12484,14411,21013,
#Partially deleted in new
chr8	141210528	141254229	chr8:141210528-141254229	1	-	141211571	141254229	789624	8	1169,360,212,100,1019,180,189,241,	0,1668,5230,6561,7482,9121,11048,43460,
#Partially deleted in new
chr8	141210600	141228574	chr8:141210600-141228574	3	-	141211441	141228266	789624	8	1097,353,212,100,1019,180,189,396,	0,1603,5158,6489,7410,9049,10976,17578,
#Partially deleted in new
chr8	141218773	141308305	chr8:141218773-141308305	0	-	141218773	141219680	789624	4	256,180,189,210,	0,876,2803,89322,
#Partially deleted in new
chr8	141219746	141230348	chr8:141219746-141230348	0	-	141219746	141230112	789624	3	83,189,270,	0,1830,10332,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	141224287	141226947	chr8:141224287-141226947	3	-	141224287	141224287	8553170	1	2660,	0,
#Deleted in new
chr8	141252285	141253292	chr8:141252285-141253292	3	-	141252285	141252285	8553170	2	285,112,	0,895,
#Partially deleted in new
chr8	141254100	141308292	chr8:141254100-141308292	0	-	141254100	141254100	8553170	2	529,197,	0,53995,
#Partially deleted in new
chr8	141254564	141256817	chr8:141254564-141256817	3	+	141254564	141254564	8553170	2	207,377,	0,1876,
#Partially deleted in new
chr8	141278227	141292862	chr8:141278227-141292862	3	+	141278227	141278227	8553170	2	125,169,	0,14466,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	141326129	141327137	chr8:141326129-141327137	3	+	141326129	141326129	8553170	2	239,174,	0,834,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	141340548	141344621	chr8:141340548-141344621	3	+	141340548	141340548	789624	4	124,136,258,278,	0,1792,2409,3795,
#Deleted in new
chr8	141342324	141344621	chr8:141342324-141344621	0	+	141342324	141342324	8553170	3	152,258,278,	0,633,2019,
#Deleted in new
chr8	141353402	141355365	chr8:141353402-141355365	3	-	141353402	141353402	8553170	1	1963,	0,
#Partially deleted in new
chr8	141356499	141367267	chr8:141356499-141367267	3	-	141356846	141357923	789624	2	1448,67,	0,10701,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	141389938	141392574	chr8:141389938-141392574	3	-	141389938	141389938	8553170	2	1213,167,	0,2469,
#Partially deleted in new
chr8	141391992	141431294	chr8:141391992-141431294	3	+	141422240	141431044	0	6	92,958,93,131,75,368,	0,29395,33055,34946,35757,38934,
#Partially deleted in new
chr8	141391994	141431520	chr8:141391994-141431520	1	+	141422240	141431044	0	5	90,958,93,131,594,	0,29393,33053,34944,38932,
#Partially deleted in new
chr8	141392020	141426951	chr8:141392020-141426951	0	+	141422240	141426951	789624	5	64,223,165,93,13,	0,29367,30160,33027,34918,
#Deleted in new
chr8	141421387	141432454	chr8:141421387-141432454	1	+	141422240	141431044	0	5	958,93,131,75,1528,	0,3660,5551,6362,9539,
#Deleted in new
chr8	141421387	141432454	chr8:141421387-141432454	1	+	141422240	141431044	0	4	958,93,131,1528,	0,3660,5551,9539,
#Deleted in new
chr8	141422017	141431520	chr8:141422017-141431520	1	+	141422240	141431044	789624	3	328,41,594,	0,5766,8909,
#Partially deleted in new
chr8	141433828	141507230	chr8:141433828-141507230	0	-	141495443	141507149	789624	28	230,75,103,123,156,177,144,115,144,182,160,155,150,167,136,105,96,80,123,147,188,117,108,53,160,129,146,161,	0,722,995,1298,2084,2857,6397,7314,7807,14078,15761,32580,33570,36768,37227,39021,40303,43574,43947,44790,45310,46081,46512,54722,56288,60980,61509,73241,
#Partially deleted in new
chr8	141433828	141507230	chr8:141433828-141507230	0	-	141495443	141507149	789624	27	230,75,123,156,144,115,144,182,160,155,150,164,136,105,226,80,123,147,188,117,108,53,141,160,129,146,161,	0,722,1298,2084,6397,7314,7807,14078,15761,32580,33570,36768,37227,39021,40173,43574,43947,44790,45310,46081,46512,54722,55868,56288,60980,61509,73241,
#Partially deleted in new
chr8	141433828	141507230	chr8:141433828-141507230	3	-	141433957	141507149	789624	31	230,75,103,123,156,177,144,115,144,44,135,160,155,150,167,136,105,96,223,80,123,147,120,117,108,53,160,129,146,182,161,	0,722,995,1298,2084,2857,6397,7314,7807,14078,14125,15761,32580,33570,36768,37227,39021,40303,42096,43574,43947,44790,45378,46081,46512,54722,56288,60980,61509,62491,73241,
#Partially deleted in new
chr8	141433831	141507230	chr8:141433831-141507230	1	-	141433957	141507149	8553170	30	227,75,103,123,156,177,144,115,144,182,160,155,150,167,136,105,96,223,80,123,147,120,117,108,53,160,129,146,182,161,	0,719,992,1295,2081,2854,6394,7311,7804,14075,15758,32577,33567,36765,37224,39018,40300,42093,43571,43944,44787,45375,46078,46509,54719,56285,60977,61506,62488,73238,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	141434544	141437954	chr8:141434544-141437954	3	+	141434544	141434544	8553170	3	2521,195,245,	0,2781,3165,
#Deleted in new
chr8	141447474	141447549	chr8:141447474-141447549	3	+	141447474	141447474	8553170	1	75,	0,
#Deleted in new
chr8	141459074	141460031	chr8:141459074-141460031	7	+	141459074	141459074	16724991	1	957,	0,
#Deleted in new
chr8	141494910	141496759	chr8:141494910-141496759	0	-	141494910	141496476	789624	3	27,146,440,	0,427,1409,
#Deleted in new
chr8	141514637	141518737	chr8:141514637-141518737	1	+	141514696	141518715	789624	2	126,522,	0,3578,
#Deleted in new
chr8	141514696	141518715	chr8:141514696-141518715	3	+	141514696	141518715	789624	2	79,500,	0,3519,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	141786241	141786313	chr8:141786241-141786313	3	-	141786241	141786241	5263520	1	72,	0,
#Deleted in new
chr8	141968090	141968841	chr8:141968090-141968841	7	-	141968090	141968090	16724991	1	751,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	142089826	142091619	chr8:142089826-142091619	3	+	142089826	142089826	8553170	1	1793,	0,
#Deleted in new
chr8	142176338	142176418	chr8:142176338-142176418	3	+	142176338	142176338	5263520	1	80,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	142198355	142209003	chr8:142198355-142209003	3	+	142198355	142198355	5263520	3	101,191,754,	0,8329,9894,
#Partially deleted in new
chr8	142212079	142403240	chr8:142212079-142403240	3	-	142229483	142354724	789624	14	234,107,83,73,159,57,90,91,70,78,507,150,127,137,	0,17393,62701,72333,88406,102304,102923,106464,118821,119674,131886,133663,142557,191024,
#Partially deleted in new
chr8	142212080	142403182	chr8:142212080-142403182	1	-	142229483	142354724	789624	14	233,107,83,73,162,57,90,91,70,78,507,150,127,79,	0,17392,62700,72332,88405,102303,102922,106463,118820,119673,131885,133662,142556,191023,
#Partially deleted in new
chr8	142212166	142354763	chr8:142212166-142354763	1	-	142229483	142354724	789624	13	147,107,83,73,162,57,90,91,70,78,507,150,127,	0,17306,62614,72246,88319,102217,102836,106377,118734,119587,131799,133576,142470,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	142247584	142247866	chr8:142247584-142247866	3	-	142247584	142247584	8553170	1	282,	0,
#Partially deleted in new
chr8	142270474	142403168	chr8:142270474-142403168	1	-	142271646	142354724	789624	11	1217,83,73,162,57,87,91,70,78,127,65,	0,4306,13938,30011,43909,44528,48069,60426,61279,84162,132629,
#Deleted in new
chr8	142271566	142279997	chr8:142271566-142279997	0	-	142271566	142271566	8553170	3	125,83,138,	0,3214,8293,
#Partially deleted in new
chr8	142300115	142326225	chr8:142300115-142326225	0	-	142300115	142300115	8553170	5	529,57,90,91,173,	0,14268,14887,18428,25937,
#Partially deleted in new
chr8	142344259	142402888	chr8:142344259-142402888	0	-	142344259	142354724	789624	4	213,150,127,99,	0,1483,10377,58530,
#Partially deleted in new
chr8	142344352	142403182	chr8:142344352-142403182	0	-	142344352	142365919	789624	5	120,150,127,107,79,	0,1390,10284,21558,58751,
#Deleted in new
chr8	142403651	142407028	chr8:142403651-142407028	3	+	142403651	142403651	8553170	1	3377,	0,
#Partially deleted in new
chr8	142449429	142545009	chr8:142449429-142545009	3	+	142464198	142544417	789624	31	675,1003,162,111,165,165,174,165,102,107,195,69,109,144,76,103,44,142,104,103,151,70,67,86,172,96,40,707,36,108,790,	0,14550,26044,27155,27684,27955,28757,29893,30263,31824,32087,34547,35226,38934,39605,39906,41342,61502,68708,71393,72535,73211,74808,77112,83865,87557,89944,92511,93973,94171,94790,
#Partially deleted in new
chr8	142449429	142545009	chr8:142449429-142545009	1	+	142464198	142544417	789624	31	675,1003,162,111,165,165,165,165,102,107,195,69,109,144,76,103,44,142,104,103,151,70,67,86,172,96,40,707,36,108,790,	0,14550,26044,27155,27684,27955,28766,29893,30263,31824,32087,34547,35226,38934,39605,39906,41342,61502,68708,71393,72535,73211,74808,77112,83865,87557,89944,92511,93973,94171,94790,
#Partially deleted in new
chr8	142449678	142545006	chr8:142449678-142545006	0	+	142464198	142533462	789624	30	426,1003,162,111,165,165,174,165,102,107,195,69,109,144,76,103,44,142,104,103,151,70,67,172,96,40,707,36,108,787,	0,14301,25795,26906,27435,27706,28508,29644,30014,31575,31838,34298,34977,38685,39356,39657,41093,61253,68459,71144,72286,72962,74559,83616,87308,89695,92262,93724,93922,94541,
#Partially deleted in new
chr8	142464015	142545006	chr8:142464015-142545006	1	+	142464198	142544417	789624	30	967,162,111,165,165,174,165,102,107,195,69,109,144,76,103,44,142,104,103,151,70,67,86,172,96,40,707,36,108,787,	0,11458,12569,13098,13369,14171,15307,15677,17238,17501,19961,20640,24348,25019,25320,26756,46916,54122,56807,57949,58625,60222,62526,69279,72971,75358,77925,79387,79585,80204,
#Partially deleted in new
chr8	142479119	142540020	chr8:142479119-142540020	0	+	142479119	142479119	8553170	18	675,107,195,69,109,144,76,103,44,142,104,103,151,70,86,172,96,647,	0,2134,2397,4857,5536,9244,9915,10216,11652,31812,39018,41703,42845,43521,47422,54175,57867,60254,
#Deleted in new
chr8	142543500	142544684	chr8:142543500-142544684	0	+	142543500	142543500	8553170	2	208,465,	0,719,
#Partially deleted in new
chr8	142567259	142577881	chr8:142567259-142577881	7	-	142567259	142567259	16724991	12	114,158,144,112,137,185,211,138,67,117,108,87,	0,2301,3056,3836,4167,4552,6425,7271,8137,8543,9245,10535,
#Partially deleted in new
chr8	142569563	142571497	chr8:142569563-142571497	4	-	142569563	142569563	16724991	3	159,133,50,	0,752,1884,
#Deleted in new
chr8	142575396	142575840	chr8:142575396-142575840	4	-	142575396	142575396	16724991	2	71,38,	0,406,
#Deleted in new
chr8	142611043	142614472	chr8:142611043-142614472	3	-	142613080	142614271	789624	3	814,145,1989,	0,1064,1440,
#Deleted in new
chr8	142612064	142612702	chr8:142612064-142612702	0	-	142612064	142612064	8553170	2	188,219,	0,419,
#Deleted in new
chr8	142620372	142621064	chr8:142620372-142621064	3	+	142620372	142620372	8553170	1	692,	0,
#Deleted in new
chr8	142638595	142640648	chr8:142638595-142640648	3	+	142638595	142638595	789624	2	293,210,	0,1843,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	142657459	142669994	chr8:142657459-142669994	3	-	142664351	142666058	789624	2	9061,63,	0,12472,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	142657459	142666520	chr8:142657459-142666520	1	-	142664351	142666058	789624	2	8868,64,	0,8997,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	142657462	142669970	chr8:142657462-142669970	1	-	142658854	142666058	789624	4	618,123,2043,39,	0,1359,7015,12469,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	142658363	142669994	chr8:142658363-142669994	1	-	142658854	142666058	789624	3	581,2043,63,	0,6114,11568,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	142659297	142663522	chr8:142659297-142663522	0	-	142659297	142659297	8553170	2	164,397,	0,3828,
#Partially deleted in new
chr8	142665981	142669988	chr8:142665981-142669988	0	-	142665981	142666058	789624	2	539,48,	0,3959,
#Partially deleted in new
chr8	142666414	142681968	chr8:142666414-142681968	0	-	142666414	142666414	8553170	3	106,201,264,	0,3517,15290,
#Partially deleted in new
chr8	142670307	142681916	chr8:142670307-142681916	0	+	142670307	142670307	8553170	2	261,590,	0,11019,
#Partially deleted in new
chr8	142670320	142682299	chr8:142670320-142682299	0	+	142670320	142670320	789624	3	248,108,379,	0,11006,11600,
#Partially deleted in new
chr8	142675898	142681968	chr8:142675898-142681968	0	-	142675898	142675898	8553170	2	310,264,	0,5806,
#Partially deleted in new
chr8	142675898	142681834	chr8:142675898-142681834	0	-	142675898	142675898	8553170	4	310,177,52,130,	0,456,693,5806,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	142679973	142681968	chr8:142679973-142681968	0	-	142679973	142679973	8553170	2	911,264,	0,1731,
#Partially deleted in new
chr8	142680145	142681804	chr8:142680145-142681804	0	-	142680145	142680145	8553170	2	992,100,	0,1559,
#Partially deleted in new
chr8	142680455	142682724	chr8:142680455-142682724	3	+	142680538	142682132	789624	3	108,108,804,	0,871,1465,
#Partially deleted in new
chr8	142680456	142681770	chr8:142680456-142681770	1	+	142680538	142681466	789624	2	107,444,	0,870,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	142700110	142705127	chr8:142700110-142705127	3	+	142700527	142703371	789624	3	520,114,2037,	0,1489,2980,
#Partially deleted in new
chr8	142700112	142702722	chr8:142700112-142702722	1	+	142700527	142702585	789624	3	518,114,223,	0,1487,2387,
#Partially deleted in new
chr8	142700113	142703454	chr8:142700113-142703454	1	+	142700527	142703223	789624	3	517,114,332,	0,1486,3009,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	142700471	142704164	chr8:142700471-142704164	1	+	142700527	142701754	789624	2	159,2565,	0,1128,
#Partially deleted in new
chr8	142701598	142703460	chr8:142701598-142703460	0	+	142701598	142701598	8553170	2	115,617,	0,1245,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	142702251	142726973	chr8:142702251-142726973	3	-	142702251	142702251	789624	3	5328,104,252,	0,6063,24470,
#Partially deleted in new
chr8	142727202	142736927	chr8:142727202-142736927	3	+	142727346	142735439	789624	2	657,1602,	0,8123,
#Deleted in new
chr8	142727282	142727690	chr8:142727282-142727690	3	-	142727282	142727282	8553170	2	244,96,	0,312,
#Partially deleted in new
chr8	142727722	142736927	chr8:142727722-142736927	0	+	142727722	142735439	789624	3	137,343,71,	0,7603,9134,
#Deleted in new
chr8	142734529	142736925	chr8:142734529-142736925	0	+	142734529	142734529	8553170	2	1966,313,	0,2083,
#Deleted in new
chr8	142740943	142742411	chr8:142740943-142742411	3	-	142741142	142742385	0	3	333,120,84,	0,859,1384,
#Deleted in new
chr8	142750149	142752534	chr8:142750149-142752534	3	-	142750282	142752451	789624	3	333,120,141,	0,901,2244,
#Partially deleted in new
chr8	142764333	142776021	chr8:142764333-142776021	1	-	142765068	142775957	789624	5	254,105,23,102,116,	0,702,11007,11259,11572,
#Partially deleted in new
chr8	142764337	142769844	chr8:142764337-142769844	3	-	142764604	142769806	0	3	404,105,90,	0,698,5417,
#Partially deleted in new
chr8	142764337	142778224	chr8:142764337-142778224	3	-	142764604	142775957	789624	5	404,105,102,216,466,	0,698,11255,11568,13421,
#Partially deleted in new
chr8	142764350	142769785	chr8:142764350-142769785	0	-	142764459	142769785	789624	3	237,105,31,	0,685,5404,
#Deleted in new
chr8	142771196	142777328	chr8:142771196-142777328	1	-	142775166	142775957	0	4	4167,102,216,223,	0,4396,4709,5909,
#Deleted in new
chr8	142771196	142777810	chr8:142771196-142777810	3	-	142775166	142775957	0	4	4167,102,216,52,	0,4396,4709,6562,
#Deleted in new
chr8	142774922	142777022	chr8:142774922-142777022	1	-	142775166	142775957	0	4	441,102,216,109,	0,670,983,1991,
#Deleted in new
chr8	142775265	142777328	chr8:142775265-142777328	0	-	142775265	142775957	789624	4	98,102,216,223,	0,327,640,1840,
#Deleted in new
chr8	142775271	142776596	chr8:142775271-142776596	0	-	142775271	142775957	789624	4	92,102,216,153,	0,321,634,1172,
#Deleted in new
chr8	142775622	142777263	chr8:142775622-142777263	0	-	142775622	142775622	8553170	2	72,158,	0,1483,
#Deleted in new
chr8	142784879	142786592	chr8:142784879-142786592	3	-	142785220	142786516	789624	3	577,99,128,	0,709,1585,
#Deleted in new
chr8	142784881	142786529	chr8:142784881-142786529	0	-	142784881	142784881	8553170	3	575,173,65,	0,707,1583,
#Deleted in new
chr8	142784881	142786304	chr8:142784881-142786304	0	-	142784881	142784881	8553170	1	1423,	0,
#Deleted in new
chr8	142785294	142785932	chr8:142785294-142785932	0	-	142785294	142785294	8553170	2	162,344,	0,294,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	142785373	142812120	chr8:142785373-142812120	3	+	142785373	142785373	8553170	3	93,123,386,	0,184,26361,
#Deleted in new
chr8	142797623	142806142	chr8:142797623-142806142	7	-	142797623	142797623	16724991	3	201,99,52,	0,3459,8467,
#Deleted in new
chr8	142834137	142834788	chr8:142834137-142834788	0	-	142834137	142834137	8553170	2	85,141,	0,510,
#Deleted in new
chr8	142834137	142834940	chr8:142834137-142834940	3	-	142834137	142834137	8553170	2	85,264,	0,539,
#Partially deleted in new
chr8	142834246	142916506	chr8:142834246-142916506	0	+	142840437	142916506	789624	5	43,95,108,83,91,	0,6169,6871,79716,82169,
#Partially deleted in new
chr8	142834800	142846846	chr8:142834800-142846846	3	+	142840437	142846690	789624	4	68,95,108,452,	0,5615,6317,11594,
#Partially deleted in new
chr8	142858353	142858797	chr8:142858353-142858797	7	+	142858353	142858353	16724991	1	444,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	142872355	142879846	chr8:142872355-142879846	0	-	142872355	142872355	8553170	7	2131,79,684,204,200,156,272,	0,2878,3356,4326,4667,6676,7219,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	142872356	142875797	chr8:142872356-142875797	0	-	142874372	142875797	789624	4	2130,198,148,86,	0,2600,2877,3355,
#Deleted in new
chr8	142873253	142879846	chr8:142873253-142879846	3	-	142874372	142879813	789624	9	1233,198,79,167,155,204,200,156,272,	0,1703,1980,2458,2987,3428,3769,5778,6321,
#Deleted in new
chr8	142873823	142879824	chr8:142873823-142879824	1	-	142874372	142879813	789624	8	663,79,167,155,204,200,156,250,	0,1410,1888,2417,2858,3199,5208,5751,
#Deleted in new
chr8	142873824	142879820	chr8:142873824-142879820	1	-	142874372	142879813	789624	11	662,198,79,167,155,204,200,78,156,135,246,	0,1132,1409,1887,2416,2857,3198,3932,5207,5521,5750,
#Deleted in new
chr8	142910558	142917843	chr8:142910558-142917843	3	-	142911979	142917840	0	9	1535,198,79,167,155,204,200,156,242,	0,1971,2248,2726,3705,4146,4487,6500,7043,
#Partially deleted in new
chr8	142981737	143018390	chr8:142981737-143018390	3	-	142981737	142981737	789624	2	764,231,	0,36422,
#Partially deleted in new
chr8	142982048	143018381	chr8:142982048-143018381	1	-	142982048	142982048	8553170	3	453,159,222,	0,27000,36111,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	142994875	143012577	chr8:142994875-143012577	1	-	142994875	142994875	8553170	2	782,93,	0,17609,
#Partially deleted in new
chr8	142995849	142996482	chr8:142995849-142996482	7	+	142995849	142995849	16724991	1	633,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	143007752	143018397	chr8:143007752-143018397	1	-	143007752	143007752	8553170	3	1455,88,238,	0,4732,10407,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	143016665	143018437	chr8:143016665-143018437	0	-	143016665	143016665	8553170	2	481,278,	0,1494,
#Partially deleted in new
chr8	143017981	143022410	chr8:143017981-143022410	1	+	143018016	143021422	789624	4	266,104,120,845,	0,2906,3332,3584,
#Partially deleted in new
chr8	143018481	143022412	chr8:143018481-143022412	3	+	143020939	143021789	789624	4	105,109,120,847,	0,2401,2832,3084,
#Partially deleted in new
chr8	143018482	143022410	chr8:143018482-143022410	1	+	143020939	143021789	789624	4	104,104,120,845,	0,2405,2831,3083,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	143018516	143022411	chr8:143018516-143022411	1	+	143020939	143021789	789624	5	70,116,104,120,846,	0,1745,2371,2797,3049,
#Partially deleted in new
chr8	143018527	143022409	chr8:143018527-143022409	1	+	143020939	143021789	789624	5	59,287,109,120,844,	0,305,2355,2786,3038,
#Partially deleted in new
chr8	143018527	143021640	chr8:143018527-143021640	1	+	143020939	143021483	789624	3	59,104,327,	0,2360,2786,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	143018528	143021902	chr8:143018528-143021902	1	+	143020939	143021789	789624	5	58,116,109,120,337,	0,1733,2354,2785,3037,
#Partially deleted in new
chr8	143018528	143021924	chr8:143018528-143021924	1	+	143020939	143021422	789624	4	58,104,85,359,	0,2359,2820,3037,
#Partially deleted in new
chr8	143018541	143022182	chr8:143018541-143022182	1	+	143020939	143021789	789624	4	45,75,120,617,	0,2375,2772,3024,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	143018543	143021800	chr8:143018543-143021800	1	+	143020939	143021577	789624	5	43,116,104,120,252,	0,1718,2344,2770,3005,
#Partially deleted in new
chr8	143018545	143022409	chr8:143018545-143022409	1	+	143020939	143021422	789624	4	41,109,85,844,	0,2337,2803,3020,
#Partially deleted in new
chr8	143018551	143022255	chr8:143018551-143022255	1	+	143020939	143021577	789624	4	35,109,120,707,	0,2331,2762,2997,
#Partially deleted in new
chr8	143018552	143023832	chr8:143018552-143023832	1	+	143020939	143023697	789624	4	34,109,120,164,	0,2330,2761,5116,
#Partially deleted in new
chr8	143018556	143021892	chr8:143018556-143021892	1	+	143020939	143021789	789624	5	30,287,104,120,327,	0,276,2331,2757,3009,
#Deleted in new
chr8	143022548	143023830	chr8:143022548-143023830	0	+	143022548	143022548	8553170	2	494,162,	0,1120,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	143039208	143053938	chr8:143039208-143053938	0	+	143039208	143039208	789624	6	361,85,169,136,90,713,	0,3969,5440,8470,10000,14017,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	143039260	143043243	chr8:143039260-143043243	0	+	143039260	143039260	8553170	2	309,286,	0,3697,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	143039260	143042519	chr8:143039260-143042519	0	+	143039260	143039260	8553170	2	309,269,	0,2990,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	143039260	143053444	chr8:143039260-143053444	3	+	143039260	143039260	789624	8	309,130,85,61,169,136,90,219,	0,3697,3917,4913,5388,8418,9948,13965,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	143039261	143054303	chr8:143039261-143054303	1	+	143039261	143039261	789624	6	308,130,100,169,90,1078,	0,3696,3901,5387,9947,13964,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	143039294	143059942	chr8:143039294-143059942	0	+	143039294	143039294	8553170	4	275,136,90,290,	0,8384,9914,20358,
#Partially deleted in new
chr8	143057059	143057816	chr8:143057059-143057816	7	-	143057059	143057059	16724991	2	159,270,	0,487,
#Partially deleted in new
chr8	143065914	143066587	chr8:143065914-143066587	7	-	143065914	143065914	16724991	2	223,121,	0,552,
#Deleted in new
chr8	143080456	143083001	chr8:143080456-143083001	3	+	143081053	143082651	789624	4	203,91,117,577,	0,579,754,1968,
#Deleted in new
chr8	143157913	143160328	chr8:143157913-143160328	1	-	143158249	143160199	789624	4	572,120,128,131,	0,889,1668,2284,
#Deleted in new
chr8	143157913	143160711	chr8:143157913-143160711	1	-	143158249	143160199	789624	5	572,120,128,70,166,	0,889,1668,2284,2632,
#Deleted in new
chr8	143157913	143160040	chr8:143157913-143160040	1	-	143158249	143159648	789624	4	572,120,128,105,	0,889,1668,2022,
#Deleted in new
chr8	143157913	143160309	chr8:143157913-143160309	0	-	143157913	143157913	8553170	3	572,907,112,	0,889,2284,
#Deleted in new
chr8	143157914	143160636	chr8:143157914-143160636	3	-	143158249	143159648	789624	5	571,120,128,70,91,	0,888,1667,2283,2631,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	143213192	143217170	chr8:143213192-143217170	3	+	143213267	143215518	789624	4	127,129,114,1912,	0,629,1820,2066,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	143246820	143253591	chr8:143246820-143253591	1	+	143249840	143250440	789624	3	929,1651,704,	0,2869,6067,
#Partially deleted in new
chr8	143246927	143262705	chr8:143246927-143262705	3	+	143249840	143250440	789624	3	215,1651,2931,	0,2762,12847,
#Partially deleted in new
chr8	143246930	143248490	chr8:143246930-143248490	0	+	143246930	143246930	8553170	2	212,336,	0,1224,
#Partially deleted in new
chr8	143247109	143276403	chr8:143247109-143276403	3	+	143249840	143250440	789624	4	640,1651,99,507,	0,2580,27594,28787,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	143249140	143249756	chr8:143249140-143249756	0	+	143249140	143249140	8553170	2	359,67,	0,549,
#Partially deleted in new
chr8	143267432	143273383	chr8:143267432-143273383	0	+	143267432	143267432	8553170	4	52,161,79,293,	0,1927,4963,5658,
#Partially deleted in new
chr8	143267433	143276181	chr8:143267433-143276181	0	+	143267433	143267433	8553170	3	51,99,285,	0,7270,8463,
#Partially deleted in new
chr8	143267436	143276929	chr8:143267436-143276929	3	+	143269396	143276804	789624	4	48,161,99,1033,	0,1923,7267,8460,
#Partially deleted in new
chr8	143267436	143275751	chr8:143267436-143275751	1	+	143269396	143275252	789624	4	48,161,99,774,	0,1923,7267,7541,
#Deleted in new
chr8	143269357	143275552	chr8:143269357-143275552	1	+	143269396	143274810	789624	2	163,849,	0,5346,
#Deleted in new
chr8	143269357	143275694	chr8:143269357-143275694	1	+	143269396	143274766	789624	3	163,83,717,	0,5362,5620,
#Deleted in new
chr8	143269357	143276931	chr8:143269357-143276931	1	+	143269396	143276804	789624	3	163,99,1035,	0,5346,6539,
#Deleted in new
chr8	143269369	143275305	chr8:143269369-143275305	0	+	143269396	143275305	789624	3	151,99,111,	0,5334,5825,
#Deleted in new
chr8	143269465	143276411	chr8:143269465-143276411	0	+	143269465	143276109	789624	3	55,99,409,	0,5238,6537,
#Deleted in new
chr8	143274461	143276170	chr8:143274461-143276170	0	+	143274461	143274461	8553170	2	341,274,	0,1435,
#Deleted in new
chr8	143274598	143276931	chr8:143274598-143276931	0	+	143274598	143274598	8553170	1	2333,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	143280160	143280849	chr8:143280160-143280849	0	-	143280160	143280160	8553170	1	689,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	143280165	143281660	chr8:143280165-143281660	3	-	143280165	143280165	789624	3	350,116,179,	0,716,1316,
#Partially deleted in new
chr8	143280827	143281690	chr8:143280827-143281690	0	-	143280827	143280827	789624	2	170,209,	0,654,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	143280827	143281250	chr8:143280827-143281250	0	-	143280827	143280827	8553170	2	170,158,	0,265,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	143281025	143281610	chr8:143281025-143281610	0	-	143281025	143281025	8553170	2	300,129,	0,456,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	143281069	143281665	chr8:143281069-143281665	1	-	143281069	143281069	8553170	2	315,184,	0,412,
#Partially deleted in new
chr8	143289675	143295964	chr8:143289675-143295964	0	+	143290840	143295964	789624	4	143,114,94,225,	0,1069,3296,6064,
#Deleted in new
chr8	143290398	143290621	chr8:143290398-143290621	3	-	143290398	143290398	8553170	1	223,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	143290909	143296287	chr8:143290909-143296287	0	+	143293001	143296287	789624	4	858,142,94,548,	0,1233,2062,4830,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	143291388	143298061	chr8:143291388-143298061	3	+	143293001	143296800	789624	3	379,94,2322,	0,1583,4351,
#Partially deleted in new
chr8	143291403	143293312	chr8:143291403-143293312	1	+	143293001	143293115	789624	2	364,341,	0,1568,
#Partially deleted in new
chr8	143291416	143295996	chr8:143291416-143295996	0	+	143293001	143295996	789624	3	194,94,257,	0,1555,4323,
#Partially deleted in new
chr8	143291421	143295812	chr8:143291421-143295812	1	+	143293001	143295745	789624	4	346,94,92,73,	0,1550,3957,4318,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	143304383	143315807	chr8:143304383-143315807	0	-	143309440	143315807	789624	4	532,129,150,81,	0,5031,5684,11343,
#Partially deleted in new
chr8	143309323	143334896	chr8:143309323-143334896	3	-	143309440	143334861	789624	14	220,150,95,128,115,69,186,144,145,188,123,122,116,157,	0,744,6403,6675,8399,8694,11877,14675,15161,16022,16898,20026,21900,25416,
#Deleted in new
chr8	143309355	143310503	chr8:143309355-143310503	0	-	143309355	143309355	8553170	2	188,436,	0,712,
#Partially deleted in new
chr8	143309355	143359924	chr8:143309355-143359924	1	-	143309440	143329415	789624	15	188,150,95,128,115,69,186,144,145,188,123,122,116,141,50,	0,712,6371,6643,8367,8662,11845,14643,15129,15990,16866,19994,21868,49908,50519,
#Partially deleted in new
chr8	143309359	143359977	chr8:143309359-143359977	1	-	143309440	143329415	789624	14	184,150,95,128,115,69,186,144,145,188,123,122,116,103,	0,708,6367,6639,8363,8658,11841,14639,15125,15986,16862,19990,21864,50515,
#Partially deleted in new
chr8	143309376	143334795	chr8:143309376-143334795	1	-	143309440	143329415	789624	15	167,150,95,128,115,69,186,144,145,188,123,122,116,178,56,	0,691,6350,6622,8346,8641,11824,14622,15108,15969,16845,19973,21847,24731,25363,
#Partially deleted in new
chr8	143315999	143334863	chr8:143315999-143334863	0	-	143325457	143334861	789624	11	127,168,73,186,144,145,133,123,122,116,124,	0,1723,2014,5201,7999,8485,9346,10222,13350,15224,18740,
#Partially deleted in new
chr8	143316091	143334056	chr8:143316091-143334056	0	-	143316091	143329415	789624	11	35,168,73,186,144,145,188,123,122,116,261,	0,1631,1922,5109,7907,8393,9254,10130,13258,15132,17704,
#Partially deleted in new
chr8	143323999	143331811	chr8:143323999-143331811	0	-	143323999	143329415	789624	7	143,145,188,123,122,116,69,	0,485,1346,2222,5350,7224,7743,
#Partially deleted in new
chr8	143324059	143334854	chr8:143324059-143334854	0	-	143324059	143329415	789624	8	83,145,188,123,122,116,115,115,	0,425,1286,2162,5290,7164,8427,10680,
#Partially deleted in new
chr8	143325354	143329433	chr8:143325354-143329433	0	-	143327724	143329433	789624	4	179,123,488,84,	0,867,1948,3995,
#Partially deleted in new
chr8	143325424	143334844	chr8:143325424-143334844	0	-	143328288	143334844	789624	6	109,123,123,122,116,105,	0,797,2768,3925,5799,9315,
#Partially deleted in new
chr8	143325521	143344984	chr8:143325521-143344984	0	-	143325521	143343248	789624	6	12,123,122,116,67,69,	0,700,3828,5702,17698,19394,
#Partially deleted in new
chr8	143326289	143356046	chr8:143326289-143356046	0	-	143326289	143343248	789624	6	55,122,116,171,67,82,	0,3060,4934,6197,16930,29675,
#Partially deleted in new
chr8	143326311	143359960	chr8:143326311-143359960	0	-	143326311	143329415	789624	6	33,122,116,66,141,86,	0,3038,4912,18604,32952,33563,
#Partially deleted in new
chr8	143329386	143334866	chr8:143329386-143334866	0	-	143329386	143334861	789624	4	85,116,171,127,	0,1837,3100,5353,
#Partially deleted in new
chr8	143332502	143334821	chr8:143332502-143334821	0	-	143332502	143332502	8553170	3	99,132,82,	0,1293,2237,
#Partially deleted in new
chr8	143343198	143359979	chr8:143343198-143359979	0	-	143343198	143343198	8553170	3	1783,141,105,	0,16065,16676,
#Partially deleted in new
chr8	143344736	143358666	chr8:143344736-143358666	0	-	143344736	143344736	8553170	4	245,114,71,90,	0,10584,11228,13840,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	143350171	143350278	chr8:143350171-143350278	3	+	143350171	143350171	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	143366630	143368548	chr8:143366630-143368548	3	-	143366630	143366630	789624	1	1918,	0,
#Partially deleted in new
chr8	143368886	143384220	chr8:143368886-143384220	3	+	143368987	143382651	789624	15	161,116,129,76,78,125,167,194,157,114,195,77,147,162,1785,	0,6666,7638,8493,9382,9809,10025,10428,10942,11175,11702,12381,12685,12920,13549,
#Partially deleted in new
chr8	143368987	143384218	chr8:143368987-143384218	0	+	143368987	143368987	8553170	14	60,116,129,76,78,125,167,194,347,195,77,147,162,1783,	0,6565,7537,8392,9281,9708,9924,10327,10841,11601,12280,12584,12819,13448,
#Deleted in new
chr8	143379336	143382779	chr8:143379336-143382779	0	+	143379336	143379336	8553170	7	172,157,719,77,147,162,344,	0,492,728,1931,2235,2470,3099,
#Partially deleted in new
chr8	143412748	143417054	chr8:143412748-143417054	3	+	143412748	143412748	8553170	3	108,291,145,	0,443,4161,
#Deleted in new
chr8	143417678	143419150	chr8:143417678-143419150	3	+	143417678	143417678	789624	2	241,176,	0,1296,
#Deleted in new
chr8	143419181	143429898	chr8:143419181-143429898	0	-	143419181	143419181	8553170	2	157,389,	0,10328,
#Deleted in new
chr8	143428059	143430406	chr8:143428059-143430406	3	-	143429344	143430406	0	1	2347,	0,
#Partially deleted in new
chr8	143437654	143541453	chr8:143437654-143541453	3	-	143438055	143541421	789624	12	433,323,185,132,70,159,43,188,154,197,1318,78,	0,2386,3281,28062,30554,30727,30962,37743,70091,98602,100348,103721,
#Partially deleted in new
chr8	143484496	143507840	chr8:143484496-143507840	0	-	143484802	143507840	789624	2	451,95,	0,23249,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	143541972	143549729	chr8:143541972-143549729	3	-	143541972	143541972	8553170	2	424,74,	0,7683,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	143542109	143542398	chr8:143542109-143542398	3	+	143542109	143542109	8553170	1	289,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	143542109	143542400	chr8:143542109-143542400	3	+	143542109	143542109	8553170	1	291,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr8	143553206	143563062	chr8:143553206-143563062	3	+	143559335	143562904	0	14	554,138,97,90,221,193,169,103,54,87,173,142,74,401,	0,1852,2727,5155,6125,6570,7396,7795,8163,8535,8752,9002,9241,9455,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	143553706	143559479	chr8:143553706-143559479	0	+	143559335	143559479	789624	5	54,138,97,74,148,	0,1352,2227,4671,5625,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	143557885	143560686	chr8:143557885-143560686	0	+	143559335	143560686	789624	5	136,90,221,193,84,	0,476,1446,1891,2717,
#Partially deleted in new
chr8	143558306	143563062	chr8:143558306-143563062	1	+	143559335	143562904	0	11	145,221,193,169,103,54,87,173,142,74,401,	0,1025,1470,2296,2695,3063,3435,3652,3902,4141,4355,
#Partially deleted in new
chr8	143558337	143563055	chr8:143558337-143563055	0	+	143558337	143558337	8553170	9	114,638,169,422,87,173,142,74,394,	0,994,2265,2664,3404,3621,3871,4110,4324,
#Deleted in new
chr8	143558353	143559902	chr8:143558353-143559902	0	+	143559335	143559902	789624	3	98,218,126,	0,981,1423,
#Partially deleted in new
chr8	143558370	143561788	chr8:143558370-143561788	0	+	143558870	143561788	789624	8	81,233,221,193,169,103,54,47,	0,311,961,1406,2232,2631,2999,3371,
#Partially deleted in new
chr8	143558557	143560653	chr8:143558557-143560653	0	+	143559335	143560653	789624	4	111,221,193,51,	0,774,1219,2045,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	143558688	143563059	chr8:143558688-143563059	0	+	143558688	143558688	8553170	6	864,1647,87,392,74,398,	0,1088,3053,3270,3759,3973,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	143560039	143563059	chr8:143560039-143563059	0	+	143560039	143560039	8553170	5	732,103,54,780,398,	0,962,1330,1702,2622,
#Deleted in new
chr8	143560627	143563032	chr8:143560627-143563032	0	+	143560627	143560627	8553170	6	796,87,173,142,74,371,	0,1114,1331,1581,1820,2034,
#Deleted in new
chr8	143560860	143561878	chr8:143560860-143561878	0	+	143560860	143560860	8553170	2	563,137,	0,881,
#Deleted in new
chr8	143561357	143562362	chr8:143561357-143562362	0	+	143561357	143561357	8553170	4	66,87,173,154,	0,384,601,851,
#Deleted in new
chr8	143561729	143563027	chr8:143561729-143563027	0	+	143561729	143561729	8553170	5	99,173,142,74,366,	0,229,479,718,932,
#Deleted in new
chr8	143562049	143563062	chr8:143562049-143563062	0	+	143562049	143563062	789624	4	82,142,74,393,	0,159,398,620,
#Deleted in new
chr8	143566186	143572971	chr8:143566186-143572971	3	-	143567238	143572714	789624	14	1279,66,103,120,168,174,144,115,138,185,118,155,153,551,	0,1424,1599,1955,2365,3254,3510,3764,4056,4286,4690,5480,5846,6234,
#Deleted in new
chr8	143566191	143568757	chr8:143566191-143568757	0	-	143566191	143566191	8553170	3	1274,66,972,	0,1419,1594,
#Deleted in new
chr8	143566191	143569750	chr8:143566191-143569750	1	-	143567238	143567391	789624	5	1274,66,103,168,310,	0,1419,1594,2360,3249,
#Deleted in new
chr8	143566194	143567886	chr8:143566194-143567886	0	-	143566194	143566194	8553170	2	323,101,	0,1591,
#Deleted in new
chr8	143566197	143568854	chr8:143566197-143568854	1	-	143567238	143567391	789624	4	1268,103,120,303,	0,1588,1944,2354,
#Deleted in new
chr8	143566210	143567111	chr8:143566210-143567111	0	-	143566210	143566210	8553170	2	307,495,	0,406,
#Deleted in new
chr8	143566301	143568887	chr8:143566301-143568887	1	-	143567238	143567391	789624	5	1164,66,103,120,336,	0,1309,1484,1840,2250,
#Deleted in new
chr8	143567368	143568843	chr8:143567368-143568843	0	-	143567368	143567368	8553170	3	97,278,292,	0,242,1183,
#Deleted in new
chr8	143567371	143568860	chr8:143567371-143568860	0	-	143567371	143567391	8553170	4	94,66,103,309,	0,239,414,1180,
#Deleted in new
chr8	143568152	143568665	chr8:143568152-143568665	0	-	143568152	143568152	8553170	2	109,196,	0,317,
#Deleted in new
chr8	143568586	143572748	chr8:143568586-143572748	0	-	143568586	143572714	789624	10	133,174,144,115,175,185,118,155,153,328,	0,854,1110,1364,1656,1886,2290,3080,3446,3834,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	143573489	143577397	chr8:143573489-143577397	3	+	143573489	143573489	8553170	5	77,108,144,107,737,	0,308,1162,1510,3171,
#Deleted in new
chr8	143574784	143578343	chr8:143574784-143578343	1	-	143575163	143578318	789624	11	561,103,81,85,141,197,116,131,83,128,251,	0,638,837,1293,1647,1861,2277,2484,2872,3031,3308,
#Deleted in new
chr8	143574784	143578613	chr8:143574784-143578613	3	-	143574837	143578318	0	13	116,108,155,103,81,85,141,197,116,131,83,128,521,	0,201,406,638,837,1293,1647,1861,2277,2484,2872,3031,3308,
#Deleted in new
chr8	143574784	143576162	chr8:143574784-143576162	0	-	143574784	143576162	789624	5	309,116,103,81,85,	0,445,638,837,1293,
#Deleted in new
chr8	143574784	143575323	chr8:143574784-143575323	0	-	143574784	143574784	8553170	2	116,338,	0,201,
#Deleted in new
chr8	143574785	143575415	chr8:143574785-143575415	0	-	143574785	143574785	8553170	3	115,108,225,	0,200,405,
#Deleted in new
chr8	143574786	143578339	chr8:143574786-143578339	0	-	143574786	143578318	789624	12	307,155,103,81,85,141,197,116,131,83,128,247,	0,404,636,835,1291,1645,1859,2275,2482,2870,3029,3306,
#Deleted in new
chr8	143574786	143578343	chr8:143574786-143578343	1	-	143574837	143578318	0	13	114,108,116,103,81,85,141,197,116,131,83,128,251,	0,199,443,636,835,1291,1645,1859,2275,2482,2870,3029,3306,
#Deleted in new
chr8	143574786	143576801	chr8:143574786-143576801	0	-	143574786	143574786	8553170	7	114,108,155,103,81,495,156,	0,199,404,636,835,1291,1859,
#Deleted in new
chr8	143575431	143578218	chr8:143575431-143578218	0	-	143576819	143578218	789624	9	94,81,85,141,197,131,83,128,126,	0,190,646,1000,1214,1837,2225,2384,2661,
#Deleted in new
chr8	143575599	143577915	chr8:143575599-143577915	0	-	143575599	143575599	8553170	7	103,85,141,197,116,131,259,	0,478,832,1046,1462,1669,2057,
#Deleted in new
chr8	143575622	143578158	chr8:143575622-143578158	0	-	143576819	143578158	789624	8	80,85,141,197,131,83,83,66,	0,455,809,1023,1646,2034,2238,2470,
#Deleted in new
chr8	143576439	143578193	chr8:143576439-143578193	0	-	143576439	143576439	8553170	5	133,754,83,128,101,	0,206,1217,1376,1653,
#Deleted in new
chr8	143576942	143578649	chr8:143576942-143578649	0	-	143576942	143576942	8553170	5	235,131,83,128,64,	0,326,714,873,1643,
#Deleted in new
chr8	143577266	143578321	chr8:143577266-143578321	0	-	143577266	143577266	8553170	3	133,83,506,	0,390,549,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	143578357	143583304	chr8:143578357-143583304	3	+	143578357	143578357	8553170	1	4947,	0,
#Deleted in new
chr8	143579635	143580670	chr8:143579635-143580670	3	+	143579635	143579635	8553170	2	268,163,	0,872,
#Partially deleted in new
chr8	143579696	143597388	chr8:143579696-143597388	1	-	143579791	143586845	0	8	134,195,222,101,100,72,124,510,	0,315,809,1357,1532,6522,7032,17182,
#Partially deleted in new
chr8	143579696	143597675	chr8:143579696-143597675	1	-	143579791	143586845	0	9	134,195,222,101,100,72,121,179,328,	0,315,809,1357,1532,6522,7032,14196,17651,
#Partially deleted in new
chr8	143579696	143597675	chr8:143579696-143597675	3	-	143579791	143590081	0	9	134,195,222,101,100,72,124,1102,328,	0,315,809,1357,1532,6522,7032,9294,17651,
#Partially deleted in new
chr8	143579721	143597396	chr8:143579721-143597396	1	-	143579784	143586845	789624	4	109,162,99,49,	0,290,7032,17626,
#Partially deleted in new
chr8	143579727	143597679	chr8:143579727-143597679	1	-	143579791	143586845	0	8	103,195,222,101,100,72,124,332,	0,284,778,1326,1501,6491,7001,17620,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	143579727	143597415	chr8:143579727-143597415	1	-	143579791	143590081	0	10	103,195,222,101,100,72,124,1091,131,68,	0,284,778,1326,1501,6491,7001,9263,10880,17620,
#Partially deleted in new
chr8	143579727	143597413	chr8:143579727-143597413	1	-	143579791	143586845	0	8	103,195,222,101,43,72,124,66,	0,284,778,1326,1558,6491,7001,17620,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	143579727	143584251	chr8:143579727-143584251	0	-	143579727	143579727	8553170	4	103,195,222,3198,	0,284,778,1326,
#Partially deleted in new
chr8	143579727	143597425	chr8:143579727-143597425	1	-	143579791	143586845	0	7	103,195,222,101,100,124,78,	0,284,778,1326,1501,7001,17620,
#Partially deleted in new
chr8	143579727	143597744	chr8:143579727-143597744	1	-	143579791	143586845	0	8	103,195,222,101,100,72,121,397,	0,284,778,1326,1501,6491,7001,17620,
#Deleted in new
chr8	143579727	143580637	chr8:143579727-143580637	0	-	143579791	143580637	789624	3	97,195,132,	0,284,778,
#Deleted in new
chr8	143579727	143580740	chr8:143579727-143580740	0	-	143579791	143580740	789624	3	103,195,235,	0,284,778,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	143579727	143590460	chr8:143579727-143590460	1	-	143579791	143590231	789624	8	103,195,222,101,100,72,124,1470,	0,284,778,1326,1501,6491,7001,9263,
#Partially deleted in new
chr8	143579727	143597428	chr8:143579727-143597428	0	-	143580629	143586845	789624	7	103,195,127,101,100,124,81,	0,284,778,1326,1501,7001,17620,
#Partially deleted in new
chr8	143579728	143597387	chr8:143579728-143597387	0	-	143580629	143586845	789624	8	102,195,127,101,100,72,124,40,	0,283,777,1325,1500,6490,7000,17619,
#Partially deleted in new
chr8	143579728	143597400	chr8:143579728-143597400	1	-	143579791	143586845	789624	7	102,195,222,101,43,124,53,	0,283,777,1325,1557,7000,17619,
#Partially deleted in new
chr8	143579735	143597415	chr8:143579735-143597415	1	-	143579791	143586845	0	8	95,195,222,101,100,124,179,68,	0,276,770,1318,1493,6993,12979,17612,
#Partially deleted in new
chr8	143580009	143597404	chr8:143580009-143597404	0	-	143580629	143586845	789624	8	197,127,101,100,72,124,179,57,	0,496,1044,1219,6209,6719,13883,17338,
#Partially deleted in new
chr8	143580018	143597675	chr8:143580018-143597675	1	-	143580018	143590081	789624	10	54,132,222,101,100,72,124,1091,14,328,	0,56,487,1035,1210,6200,6710,8972,12628,17329,
#Partially deleted in new
chr8	143580033	143597362	chr8:143580033-143597362	0	-	143580033	143586845	789624	8	173,222,101,100,72,121,197,15,	0,472,1020,1195,6185,6695,13841,17314,
#Partially deleted in new
chr8	143580078	143586817	chr8:143580078-143586817	0	-	143580078	143580188	789624	3	128,105,75,	0,427,6664,
#Partially deleted in new
chr8	143580185	143597399	chr8:143580185-143597399	0	-	143580185	143586845	789624	6	21,222,101,100,121,52,	0,320,868,1043,6543,17162,
#Partially deleted in new
chr8	143580388	143597388	chr8:143580388-143597388	0	-	143580388	143580388	8553170	6	339,101,100,72,124,510,	0,665,840,5830,6340,16490,
#Partially deleted in new
chr8	143580505	143597402	chr8:143580505-143597402	0	-	143580505	143586845	789624	7	222,101,100,72,124,179,55,	0,548,723,5713,6223,13387,16842,
#Partially deleted in new
chr8	143580505	143597394	chr8:143580505-143597394	0	-	143580505	143586845	789624	7	222,101,100,72,121,179,47,	0,548,723,5713,6223,13387,16842,
#Partially deleted in new
chr8	143580512	143589222	chr8:143580512-143589222	0	-	143580629	143589222	789624	6	120,101,100,72,124,232,	0,541,716,5706,6216,8478,
#Partially deleted in new
chr8	143580521	143597380	chr8:143580521-143597380	0	-	143580521	143586845	789624	7	206,101,100,72,124,151,33,	0,532,707,5697,6207,12125,16826,
#Partially deleted in new
chr8	143580563	143597400	chr8:143580563-143597400	0	-	143580563	143580563	8553170	5	164,275,72,124,53,	0,490,5655,6165,16784,
#Partially deleted in new
chr8	143580612	143597365	chr8:143580612-143597365	0	-	143580612	143586845	789624	7	115,101,100,72,124,228,18,	0,441,616,5606,6116,12102,16735,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	143580619	143587564	chr8:143580619-143587564	0	-	143580619	143586845	789624	5	108,101,100,72,836,	0,434,609,5599,6109,
#Partially deleted in new
chr8	143580641	143597397	chr8:143580641-143597397	0	-	143580641	143586845	789624	6	86,101,43,72,121,50,	0,412,644,5577,6087,16706,
#Partially deleted in new
chr8	143580662	143597384	chr8:143580662-143597384	0	-	143580662	143580662	8553170	6	65,101,421,72,121,37,	0,391,623,5556,6066,16685,
#Partially deleted in new
chr8	143581078	143599541	chr8:143581078-143599541	0	-	143581078	143599321	789624	5	76,100,72,124,261,	0,150,5140,5650,18202,
#Partially deleted in new
chr8	143586031	143597381	chr8:143586031-143597381	0	-	143586031	143586031	8553170	3	259,121,527,	0,697,10823,
#Partially deleted in new
chr8	143586218	143597393	chr8:143586218-143597393	0	-	143586218	143586845	789624	6	72,124,228,197,103,46,	0,510,6496,7656,8197,11129,
#Partially deleted in new
chr8	143586728	143589316	chr8:143586728-143589316	0	-	143586728	143586845	789624	2	121,489,	0,2099,
#Partially deleted in new
chr8	143586728	143596754	chr8:143586728-143596754	0	-	143586728	143586845	789624	2	124,667,	0,9359,
#Partially deleted in new
chr8	143586739	143597413	chr8:143586739-143597413	0	-	143586739	143586845	789624	2	113,501,	0,10173,
#Partially deleted in new
chr8	143589180	143597442	chr8:143589180-143597442	0	-	143589180	143590081	789624	2	901,95,	0,8167,
#Partially deleted in new
chr8	143589310	143596129	chr8:143589310-143596129	0	-	143589310	143590081	789624	2	771,42,	0,6777,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	143589510	143597415	chr8:143589510-143597415	0	-	143589510	143590081	789624	3	571,122,68,	0,1097,7837,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	143589539	143590893	chr8:143589539-143590893	0	-	143589539	143590081	789624	2	542,286,	0,1068,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	143589544	143596345	chr8:143589544-143596345	0	-	143589544	143590081	789624	3	537,131,258,	0,1063,6543,
#Partially deleted in new
chr8	143589609	143592169	chr8:143589609-143592169	0	-	143589609	143590081	789624	2	472,81,	0,2479,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	143589694	143597415	chr8:143589694-143597415	0	-	143589694	143590081	789624	3	387,128,68,	0,913,7653,
#Partially deleted in new
chr8	143589829	143597415	chr8:143589829-143597415	0	-	143589829	143590081	789624	3	252,296,68,	0,2817,7518,
#Partially deleted in new
chr8	143589837	143597415	chr8:143589837-143597415	0	-	143589837	143590081	789624	3	244,247,68,	0,2809,7510,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	143589876	143597415	chr8:143589876-143597415	0	-	143589876	143590081	789624	4	205,131,151,68,	0,731,2770,7471,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	143589921	143592893	chr8:143589921-143592893	0	-	143589921	143590081	789624	3	160,128,247,	0,686,2725,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	143589933	143597105	chr8:143589933-143597105	0	-	143589933	143590081	789624	3	148,131,227,	0,674,6945,
#Partially deleted in new
chr8	143589971	143597111	chr8:143589971-143597111	0	-	143589971	143590081	789624	2	110,257,	0,6883,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	143589987	143597413	chr8:143589987-143597413	0	-	143589987	143590081	789624	4	94,131,247,66,	0,620,2659,7360,
#Partially deleted in new
chr8	143590017	143597415	chr8:143590017-143597415	0	-	143590017	143590081	789624	4	64,247,179,68,	0,2629,3875,7330,
#Partially deleted in new
chr8	143592653	143597414	chr8:143592653-143597414	0	-	143592653	143592653	8553170	4	240,179,103,67,	0,1239,1762,4694,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	143597834	143603224	chr8:143597834-143603224	3	+	143597903	143599832	789624	1	5390,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	143603912	143609614	chr8:143603912-143609614	3	-	143605699	143609584	789624	6	1970,93,213,180,65,157,	0,2149,2554,3040,4149,5545,
#Partially deleted in new
chr8	143604218	143609574	chr8:143604218-143609574	1	-	143605699	143609548	789624	6	1664,93,213,180,65,117,	0,1843,2248,2734,3843,5239,
#Partially deleted in new
chr8	143605334	143609569	chr8:143605334-143609569	0	-	143608832	143609548	789624	7	548,93,213,180,65,113,112,	0,727,1132,1618,2727,3429,4123,
#Partially deleted in new
chr8	143605485	143609569	chr8:143605485-143609569	1	-	143605699	143609548	789624	6	397,93,153,180,65,112,	0,576,981,1467,2576,3972,
#Partially deleted in new
chr8	143605546	143609773	chr8:143605546-143609773	1	-	143605699	143606604	789624	6	336,93,213,180,65,98,	0,515,920,1406,2515,4129,
#Deleted in new
chr8	143606115	143608449	chr8:143606115-143608449	0	-	143606115	143606604	789624	5	39,213,180,65,82,	0,351,837,1946,2252,
#Partially deleted in new
chr8	143606467	143609557	chr8:143606467-143609557	0	-	143606467	143606467	8553170	3	665,65,100,	0,1594,2990,
#Deleted in new
chr8	143612617	143617566	chr8:143612617-143617566	3	-	143612909	143616712	0	11	348,100,80,67,65,134,74,129,115,157,93,	0,578,906,1133,1546,1702,2006,2169,3488,3949,4856,
#Deleted in new
chr8	143612617	143613607	chr8:143612617-143613607	0	-	143613184	143613607	789624	2	678,84,	0,906,
#Deleted in new
chr8	143612617	143614385	chr8:143612617-143614385	0	-	143612617	143612617	8553170	4	348,100,294,222,	0,578,906,1546,
#Deleted in new
chr8	143612617	143617482	chr8:143612617-143617482	1	-	143612909	143616712	0	11	348,100,80,67,65,134,74,129,115,157,55,	0,578,906,1133,1546,1702,2006,2169,3488,3949,4810,
#Deleted in new
chr8	143612617	143617504	chr8:143612617-143617504	0	-	143612617	143612617	8553170	9	348,100,80,67,65,378,129,115,938,	0,578,906,1133,1546,1702,2169,3488,3949,
#Deleted in new
chr8	143612620	143613391	chr8:143612620-143613391	0	-	143612620	143612620	8553170	2	345,196,	0,575,
#Deleted in new
chr8	143613528	143617474	chr8:143613528-143617474	0	-	143613528	143616712	789624	9	75,67,65,134,74,129,115,157,53,	0,222,635,791,1095,1258,2577,3038,3893,
#Deleted in new
chr8	143613769	143617532	chr8:143613769-143617532	0	-	143613769	143613769	8553170	7	48,65,378,129,115,157,59,	0,394,550,1017,2336,2797,3704,
#Deleted in new
chr8	143614321	143617300	chr8:143614321-143617300	0	-	143614321	143616712	789624	6	132,74,129,115,157,264,	0,302,465,1784,2245,2715,
#Deleted in new
chr8	143614363	143617511	chr8:143614363-143617511	0	-	143616238	143616712	789624	6	90,74,129,335,157,38,	0,260,423,1742,2203,3110,
#Deleted in new
chr8	143614404	143616726	chr8:143614404-143616726	0	-	143614404	143614404	8553170	4	267,129,115,160,	0,382,1701,2162,
#Deleted in new
chr8	143614646	143617507	chr8:143614646-143617507	0	-	143614646	143614646	8553170	4	269,115,157,34,	0,1459,1920,2827,
#Deleted in new
chr8	143614820	143618048	chr8:143614820-143618048	0	-	143614820	143616712	789624	4	95,115,157,121,	0,1285,1746,3107,
#Deleted in new
chr8	143614862	143616464	chr8:143614862-143616464	0	-	143614862	143616153	789624	2	53,359,	0,1243,
#Deleted in new
chr8	143615885	143617549	chr8:143615885-143617549	0	-	143615885	143615885	8553170	3	335,157,76,	0,681,1588,
#Deleted in new
chr8	143615942	143617552	chr8:143615942-143617552	0	-	143615942	143615942	8553170	2	781,79,	0,1531,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	143632070	143633756	chr8:143632070-143633756	3	-	143632070	143632070	8553170	2	394,307,	0,1379,
#Partially deleted in new
chr8	143636012	143652376	chr8:143636012-143652376	1	+	143649992	143651483	789624	2	133,2479,	0,13885,
#Partially deleted in new
chr8	143636161	143652376	chr8:143636161-143652376	1	+	143649992	143651483	789624	2	254,2479,	0,13736,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	143649659	143656418	chr8:143649659-143656418	3	+	143649872	143651483	789624	1	6759,	0,
#Partially deleted in new
chr8	143684451	143693830	chr8:143684451-143693830	0	+	143690108	143691225	789624	5	91,67,160,117,160,	0,5605,6621,7145,9219,
#Partially deleted in new
chr8	143684451	143691474	chr8:143684451-143691474	0	+	143684451	143684451	8553170	3	91,67,402,	0,5605,6621,
#Partially deleted in new
chr8	143684452	143693839	chr8:143684452-143693839	0	+	143690108	143693839	789624	5	90,67,127,114,169,	0,5604,6620,7147,9218,
#Partially deleted in new
chr8	143684455	143695356	chr8:143684455-143695356	0	+	143690108	143691225	789624	5	87,67,160,114,1686,	0,5601,6617,7144,9215,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	143684461	143690419	chr8:143684461-143690419	0	+	143684461	143684461	8553170	2	81,363,	0,5595,
#Partially deleted in new
chr8	143684461	143693772	chr8:143684461-143693772	0	+	143690108	143692267	789624	6	81,67,127,114,86,102,	0,5595,6611,7138,7783,9209,
#Partially deleted in new
chr8	143684472	143691694	chr8:143684472-143691694	0	+	143690108	143691694	789624	6	70,132,98,67,127,95,	0,151,4731,5584,6600,7127,
#Partially deleted in new
chr8	143684472	143693827	chr8:143684472-143693827	0	+	143690108	143693827	789624	5	70,67,127,104,157,	0,5584,6600,7137,9198,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	143684478	143693756	chr8:143684478-143693756	0	+	143690108	143691225	789624	6	64,98,67,160,114,86,	0,2902,5578,6594,7121,9192,
#Partially deleted in new
chr8	143684478	143693723	chr8:143684478-143693723	0	+	143690108	143691225	789624	6	64,98,67,160,114,53,	0,4725,5578,6594,7121,9192,
#Partially deleted in new
chr8	143684480	143695385	chr8:143684480-143695385	3	+	143690108	143694530	789624	6	62,98,67,127,114,1715,	0,4723,5576,6592,7119,9190,
#Partially deleted in new
chr8	143684480	143691914	chr8:143684480-143691914	0	+	143684480	143684480	8553170	4	62,67,127,315,	0,5576,6592,7119,
#Partially deleted in new
chr8	143684480	143691393	chr8:143684480-143691393	0	+	143684480	143684480	8553170	4	62,98,67,321,	0,4723,5576,6592,
#Partially deleted in new
chr8	143684481	143690099	chr8:143684481-143690099	0	+	143684481	143684481	8553170	2	586,43,	0,5575,
#Partially deleted in new
chr8	143684481	143691811	chr8:143684481-143691811	0	+	143684481	143684481	8553170	5	61,98,67,127,212,	0,4722,5575,6591,7118,
#Partially deleted in new
chr8	143684482	143693748	chr8:143684482-143693748	0	+	143684482	143684482	8553170	5	60,160,114,86,78,	0,6590,7117,7762,9188,
#Partially deleted in new
chr8	143684483	143695384	chr8:143684483-143695384	0	+	143684483	143684483	8553170	3	59,1258,1714,	0,6589,9187,
#Partially deleted in new
chr8	143684486	143691199	chr8:143684486-143691199	0	+	143690108	143691199	789624	4	56,312,67,127,	0,269,5570,6586,
#Partially deleted in new
chr8	143684504	143691426	chr8:143684504-143691426	0	+	143684504	143684504	8553170	4	38,132,67,354,	0,119,5552,6568,
#Partially deleted in new
chr8	143684506	143693703	chr8:143684506-143693703	0	+	143690108	143692056	789624	7	36,67,127,114,107,86,33,	0,5550,6566,7093,7494,7738,9164,
#Partially deleted in new
chr8	143684507	143693959	chr8:143684507-143693959	0	+	143691165	143693959	789624	4	35,127,114,289,	0,6565,7092,9163,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	143684507	143695380	chr8:143684507-143695380	1	+	143690108	143694530	789624	8	35,98,74,640,67,127,114,1710,	0,2409,3486,4154,5549,6565,7092,9163,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	143684509	143693711	chr8:143684509-143693711	0	+	143684509	143684509	8553170	4	33,301,114,41,	0,6389,7090,9161,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	143688658	143695380	chr8:143688658-143695380	1	+	143690108	143694530	789624	5	643,67,127,114,1710,	0,1398,2414,2941,5012,
#Partially deleted in new
chr8	143691514	143694029	chr8:143691514-143694029	0	+	143691514	143691514	8553170	2	199,359,	0,2156,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	143696153	143698413	chr8:143696153-143698413	3	+	143696153	143696153	789624	2	1488,475,	0,1785,
#Deleted in new
chr8	143706693	143708109	chr8:143706693-143708109	3	-	143706693	143708109	789624	2	876,444,	0,972,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	143709006	143713584	chr8:143709006-143713584	3	-	143709006	143709006	8553170	4	163,74,96,41,	0,3927,4308,4537,
#Partially deleted in new
chr8	143716258	143722458	chr8:143716258-143722458	3	+	143716377	143722251	789624	14	185,99,30,91,131,164,140,58,138,106,181,125,129,384,	0,1435,1788,1953,2516,2734,3084,3971,4444,4741,4972,5290,5493,5816,
#Partially deleted in new
chr8	143716339	143722458	chr8:143716339-143722458	0	+	143716339	143716339	8553170	12	104,99,30,91,182,164,140,611,181,125,129,384,	0,1354,1707,1872,2384,2653,3003,3890,4891,5209,5412,5735,
#Partially deleted in new
chr8	143716348	143718302	chr8:143716348-143718302	0	+	143716348	143716348	8553170	2	95,256,	0,1698,
#Partially deleted in new
chr8	143716377	143720291	chr8:143716377-143720291	1	+	143716377	143720291	789624	8	66,99,30,91,182,164,140,62,	0,1316,1669,1834,2346,2615,2965,3852,
#Partially deleted in new
chr8	143716377	143720591	chr8:143716377-143720591	1	+	143716377	143720591	789624	8	66,99,30,91,131,164,140,44,	0,1316,1669,1834,2397,2615,2965,4170,
#Deleted in new
chr8	143718245	143718891	chr8:143718245-143718891	3	-	143718245	143718245	8553170	2	190,109,	0,537,
#Deleted in new
chr8	143720191	143721356	chr8:143720191-143721356	0	+	143720191	143720191	8553170	3	649,106,126,	0,808,1039,
#Deleted in new
chr8	143720697	143721859	chr8:143720697-143721859	0	+	143720697	143720697	8553170	3	143,674,108,	0,302,1054,
#Deleted in new
chr8	143721547	143722132	chr8:143721547-143722132	0	+	143721547	143721547	8553170	2	126,381,	0,204,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	143723932	143733801	chr8:143723932-143733801	3	-	143725920	143730582	789624	5	4791,125,165,462,111,	0,5034,5226,6203,9758,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	143723933	143728640	chr8:143723933-143728640	0	-	143725920	143728640	789624	2	421,3190,	0,1517,
#Deleted in new
chr8	143733082	143733153	chr8:143733082-143733153	3	-	143733082	143733082	5263520	1	71,	0,
#Partially deleted in new
chr8	143734139	143790644	chr8:143734139-143790644	3	+	143735853	143790608	789624	14	80,89,90,131,165,192,126,149,55,93,109,94,135,295,	0,1710,5719,37348,37661,37912,38217,54775,55049,55296,55621,55831,55997,56210,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	143734139	143746337	chr8:143734139-143746337	1	+	143735853	143743960	789624	4	80,89,90,2478,	0,1710,5719,9720,
#Deleted in new
chr8	143739395	143742135	chr8:143739395-143742135	0	+	143739395	143739395	8553170	3	108,90,384,	0,463,2356,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	143758152	143771822	chr8:143758152-143771822	3	-	143758152	143758152	8553170	3	1654,139,16,	0,2217,13654,
#Deleted in new
chr8	143788919	143790135	chr8:143788919-143790135	0	+	143788919	143788919	8553170	4	144,55,125,375,	0,269,484,841,
#Deleted in new
chr8	143789514	143790275	chr8:143789514-143790275	0	+	143789514	143789514	8553170	3	14,109,305,	0,246,456,
#Partially deleted in new
chr8	143790919	143815379	chr8:143790919-143815379	1	-	143791162	143815372	789624	36	389,52,38,143,186,151,160,108,63,75,57,111,189,294,111,258,81,324,78,90,63,417,168,126,131,167,200,119,145,75,64,57,90,79,118,166,	0,469,956,1071,1300,1565,1788,2056,2980,4118,4357,4500,12463,12727,13126,13648,14014,14192,15487,16004,16632,17689,18631,19559,19766,19986,20226,21346,21897,22110,22391,22550,22717,22898,23081,24294,
#Partially deleted in new
chr8	143790919	143815379	chr8:143790919-143815379	3	-	143791162	143815372	789624	37	389,52,75,38,143,186,151,160,108,63,75,57,111,189,294,111,258,81,324,78,90,63,417,168,126,131,167,200,119,145,75,64,57,90,79,118,166,	0,469,746,956,1071,1300,1565,1788,2056,2980,4118,4357,4500,12463,12727,13126,13648,14014,14192,15487,16004,16632,17689,18631,19559,19766,19986,20226,21346,21897,22110,22391,22550,22717,22898,23081,24294,
#Deleted in new
chr8	143790924	143793588	chr8:143790924-143793588	0	-	143790924	143790924	8553170	7	384,52,143,182,151,160,613,	0,464,1066,1295,1560,1783,2051,
#Partially deleted in new
chr8	143790924	143804151	chr8:143790924-143804151	0	-	143791162	143804151	789624	14	384,52,38,143,186,383,108,63,75,57,111,189,294,106,	0,464,951,1066,1295,1560,2051,2975,4113,4352,4495,12458,12722,13121,
#Deleted in new
chr8	143790924	143791542	chr8:143790924-143791542	0	-	143790924	143790924	8553170	2	384,154,	0,464,
#Partially deleted in new
chr8	143790925	143814968	chr8:143790925-143814968	1	-	143791162	143814034	789624	36	383,52,38,143,186,151,160,108,63,75,57,111,189,294,111,258,81,324,78,90,63,417,168,126,131,167,200,119,145,75,64,57,90,79,118,137,	0,463,950,1065,1294,1559,1782,2050,2974,4112,4351,4494,12457,12721,13120,13642,14008,14186,15481,15998,16626,17683,18625,19553,19760,19980,20220,21340,21891,22104,22385,22544,22711,22892,23075,23906,
#Deleted in new
chr8	143792608	143794236	chr8:143792608-143794236	0	-	143792608	143792608	8553170	5	27,160,108,63,158,	0,99,367,1291,1470,
#Deleted in new
chr8	143805251	143808677	chr8:143805251-143808677	0	-	143805251	143808677	789624	4	184,78,90,69,	0,1155,1672,3357,
#Deleted in new
chr8	143812956	143813042	chr8:143812956-143813042	3	-	143812956	143812956	5263520	1	86,	0,
#Partially deleted in new
chr8	143816343	143829859	chr8:143816343-143829859	3	-	143816519	143829303	0	12	476,236,136,191,214,93,162,51,90,96,87,580,	0,566,987,1248,1518,1849,2029,4322,5253,5474,7969,12936,
#Partially deleted in new
chr8	143816376	143829039	chr8:143816376-143829039	1	-	143816519	143821895	0	11	443,236,136,191,214,93,162,90,96,87,56,	0,533,954,1215,1485,1816,1996,5220,5441,7936,12607,
#Partially deleted in new
chr8	143816376	143829352	chr8:143816376-143829352	1	-	143816519	143829303	0	11	443,236,136,191,214,93,162,90,96,87,73,	0,533,954,1215,1485,1816,1996,5220,5441,7936,12903,
#Partially deleted in new
chr8	143816376	143829026	chr8:143816376-143829026	1	-	143816519	143821895	0	12	443,236,136,191,214,93,162,51,90,96,87,43,	0,533,954,1215,1485,1816,1996,4289,5220,5441,7936,12607,
#Partially deleted in new
chr8	143816376	143829303	chr8:143816376-143829303	1	-	143816519	143829303	0	11	443,236,136,191,214,93,162,51,90,96,24,	0,533,954,1215,1485,1816,1996,4289,5220,5441,12903,
#Partially deleted in new
chr8	143816519	143829320	chr8:143816519-143829320	1	-	143816519	143829303	0	10	300,236,136,191,214,93,162,90,96,41,	0,390,811,1072,1342,1673,1853,5077,5298,12760,
#Deleted in new
chr8	143817041	143823282	chr8:143817041-143823282	0	-	143817041	143817041	8553170	10	104,136,191,214,93,162,51,90,96,797,	0,289,550,820,1151,1331,3624,4555,4776,5444,
#Deleted in new
chr8	143817079	143818476	chr8:143817079-143818476	0	-	143817079	143818476	789624	6	66,136,191,112,210,104,	0,251,512,782,996,1293,
#Partially deleted in new
chr8	143817577	143829338	chr8:143817577-143829338	0	-	143817577	143829303	789624	8	205,214,93,162,90,96,84,59,	0,284,615,795,4019,4240,6735,11702,
#Partially deleted in new
chr8	143817585	143829299	chr8:143817585-143829299	0	-	143817585	143829299	789624	9	197,214,93,162,51,90,96,84,20,	0,276,607,787,3080,4011,4232,6727,11694,
#Partially deleted in new
chr8	143817865	143829028	chr8:143817865-143829028	0	-	143817865	143817865	8553170	9	210,93,162,51,90,96,87,139,45,	0,327,507,2800,3731,3952,6447,9163,11118,
#Deleted in new
chr8	143817885	143824399	chr8:143817885-143824399	0	-	143817885	143817885	8553170	4	649,90,96,87,	0,3711,3932,6427,
#Partially deleted in new
chr8	143817949	143829044	chr8:143817949-143829044	0	-	143817949	143827519	789624	8	126,93,162,90,96,87,152,61,	0,243,423,3647,3868,6363,9435,11034,
#Deleted in new
chr8	143817978	143819037	chr8:143817978-143819037	0	-	143817978	143817978	8553170	4	97,93,162,79,	0,214,394,980,
#Partially deleted in new
chr8	143817995	143829304	chr8:143817995-143829304	0	-	143817995	143827519	789624	8	80,93,162,90,96,87,152,25,	0,197,377,3601,3822,6317,9389,11284,
#Deleted in new
chr8	143818192	143818963	chr8:143818192-143818963	0	-	143818192	143818192	8553170	2	93,591,	0,180,
#Partially deleted in new
chr8	143818221	143829338	chr8:143818221-143829338	0	-	143818221	143827519	789624	8	64,162,51,90,96,87,152,59,	0,151,2444,3375,3596,6091,9163,11058,
#Deleted in new
chr8	143818372	143824460	chr8:143818372-143824460	0	-	143818372	143818372	8553170	5	162,51,90,96,148,	0,2293,3224,3445,5940,
#Deleted in new
chr8	143820232	143821743	chr8:143820232-143821743	0	-	143820232	143820232	8553170	2	484,147,	0,1364,
#Partially deleted in new
chr8	143820425	143829319	chr8:143820425-143829319	0	-	143820425	143820425	8553170	5	291,90,96,87,40,	0,1171,1392,3887,8854,
#Partially deleted in new
chr8	143821348	143829315	chr8:143821348-143829315	0	-	143821348	143821348	8553170	4	338,96,87,36,	0,469,2964,7931,
#Deleted in new
chr8	143821596	143825140	chr8:143821596-143825140	0	-	143821596	143821596	8553170	4	90,96,87,343,	0,221,2716,3201,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	143833269	143834063	chr8:143833269-143834063	3	-	143833269	143833269	8553170	2	216,100,	0,694,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr8	143833593	143840951	chr8:143833593-143840951	0	-	143833593	143833593	8553170	17	2137,56,64,54,136,51,103,133,96,56,84,24,95,317,102,123,246,	0,2226,2373,2533,3445,3655,3813,4029,5086,5289,5423,5578,5720,5915,6335,6513,7112,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr8	143833599	143840029	chr8:143833599-143840029	0	-	143833599	143833599	8553170	13	2276,64,54,136,51,103,133,96,56,84,24,95,521,	0,2367,2527,3439,3649,3807,4023,5080,5283,5417,5572,5714,5909,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr8	143833720	143840974	chr8:143833720-143840974	3	-	143835661	143840834	789624	18	2010,56,64,54,136,51,103,133,96,56,84,24,95,41,90,102,123,269,	0,2099,2246,2406,3318,3528,3686,3902,4959,5162,5296,5451,5593,5788,6015,6208,6386,6985,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	143833741	143838074	chr8:143833741-143838074	0	-	143833741	143833741	8553170	8	1989,56,64,54,136,51,103,452,	0,2078,2225,2385,3297,3507,3665,3881,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	143833746	143837150	chr8:143833746-143837150	0	-	143833746	143833746	8553170	2	2434,112,	0,3292,
#Deleted in new
chr8	143835017	143837132	chr8:143835017-143837132	0	-	143835437	143837132	789624	4	713,64,54,94,	0,949,1109,2021,
#Deleted in new
chr8	143835529	143840213	chr8:143835529-143840213	0	-	143835529	143835529	8553170	15	201,56,64,54,136,51,103,133,96,56,84,24,95,522,107,	0,290,437,597,1509,1719,1877,2093,3150,3353,3487,3642,3784,3979,4577,
#Deleted in new
chr8	143835529	143840213	chr8:143835529-143840213	0	-	143835529	143835529	8553170	15	201,64,54,136,51,103,133,96,56,84,24,95,317,102,107,	0,437,597,1509,1719,1877,2093,3150,3353,3487,3642,3784,3979,4399,4577,
#Deleted in new
chr8	143835661	143838062	chr8:143835661-143838062	0	-	143835661	143835661	8553170	7	69,211,54,136,51,103,440,	0,158,465,1377,1587,1745,1961,
#Deleted in new
chr8	143837755	143837816	chr8:143837755-143837816	3	-	143837755	143837755	5263520	1	61,	0,
#Deleted in new
chr8	143838678	143840630	chr8:143838678-143840630	0	-	143838678	143840214	789624	10	97,56,84,24,95,41,90,102,123,325,	0,204,338,493,635,830,1057,1250,1428,1627,
#Deleted in new
chr8	143838778	143840256	chr8:143838778-143840256	3	+	143838778	143838778	8553170	2	203,479,	0,999,
#Partially deleted in new
chr8	143857323	143878464	chr8:143857323-143878464	3	-	143857986	143873253	789624	2	15975,27,	0,21114,
#Deleted in new
chr8	143857736	143873266	chr8:143857736-143873266	1	-	143857986	143873178	789624	1	15530,	0,
#Deleted in new
chr8	143915146	143939590	chr8:143915146-143939590	1	-	143916176	143939461	0	32	7249,3381,99,105,84,357,139,179,158,184,127,155,153,126,96,105,162,78,319,155,94,128,96,120,107,116,167,93,78,90,62,241,	0,7357,11637,11830,12105,12263,12707,13956,14267,14499,14789,14997,15237,16387,16790,16983,17253,17488,17646,18050,18851,19171,19488,19663,19864,20051,20701,21832,22018,23004,23484,24203,
#Partially deleted in new
chr8	143915152	143950876	chr8:143915152-143950876	1	-	143916176	143950706	0	32	7243,3381,99,105,84,357,139,179,158,184,127,155,153,126,96,105,162,78,319,155,94,128,96,120,107,116,167,93,78,90,62,693,	0,7351,11631,11824,12099,12257,12701,13950,14261,14493,14783,14991,15231,16381,16784,16977,17247,17482,17640,18044,18845,19165,19482,19657,19858,20045,20695,21826,22012,22998,23478,35031,
#Deleted in new
chr8	143915152	143943958	chr8:143915152-143943958	1	-	143916176	143943890	0	32	7243,3381,99,105,84,357,139,179,158,184,127,155,153,126,96,105,162,78,319,155,94,128,96,120,107,116,167,93,78,90,62,180,	0,7351,11631,11824,12099,12257,12701,13950,14261,14493,14783,14991,15231,16381,16784,16977,17247,17482,17640,18044,18845,19165,19482,19657,19858,20045,20695,21826,22012,22998,23478,28626,
#Partially deleted in new
chr8	143915152	143953920	chr8:143915152-143953920	1	-	143916176	143953771	0	32	7243,3381,99,105,84,357,139,179,158,184,127,155,153,126,96,105,162,78,319,155,94,128,96,120,107,116,167,93,78,90,62,195,	0,7351,11631,11824,12099,12257,12701,13950,14261,14493,14783,14991,15231,16381,16784,16977,17247,17482,17640,18044,18845,19165,19482,19657,19858,20045,20695,21826,22012,22998,23478,38573,
#Partially deleted in new
chr8	143915152	143973529	chr8:143915152-143973529	1	-	143916176	143973472	0	32	7243,3381,99,105,84,357,139,179,158,184,127,155,153,126,96,105,162,78,319,155,94,128,96,120,107,116,167,93,78,90,62,127,	0,7351,11631,11824,12099,12257,12701,13950,14261,14493,14783,14991,15231,16381,16784,16977,17247,17482,17640,18044,18845,19165,19482,19657,19858,20045,20695,21826,22012,22998,23478,58250,
#Deleted in new
chr8	143915152	143942524	chr8:143915152-143942524	1	-	143916176	143942515	0	32	7243,3381,99,105,84,357,139,179,158,184,127,155,153,126,96,105,162,78,319,155,94,128,96,120,107,116,167,93,78,90,62,133,	0,7351,11631,11824,12099,12257,12701,13950,14261,14493,14783,14991,15231,16381,16784,16977,17247,17482,17640,18044,18845,19165,19482,19657,19858,20045,20695,21826,22012,22998,23478,27239,
#Deleted in new
chr8	143915152	143944737	chr8:143915152-143944737	1	-	143916176	143944663	0	32	7243,3381,99,105,84,357,139,179,158,184,127,155,153,126,96,105,162,78,319,155,94,128,96,120,107,116,167,93,78,90,62,90,	0,7351,11631,11824,12099,12257,12701,13950,14261,14493,14783,14991,15231,16381,16784,16977,17247,17482,17640,18044,18845,19165,19482,19657,19858,20045,20695,21826,22012,22998,23478,29495,
#Partially deleted in new
chr8	143915152	143976734	chr8:143915152-143976734	1	-	143916176	143975369	0	33	7243,3381,99,105,84,357,139,179,158,184,127,155,153,126,96,105,162,78,319,155,94,128,96,120,107,116,167,93,78,90,62,199,32,	0,7351,11631,11824,12099,12257,12701,13950,14261,14493,14783,14991,15231,16381,16784,16977,17247,17482,17640,18044,18845,19165,19482,19657,19858,20045,20695,21826,22012,22998,23478,60024,61550,
#Partially deleted in new
chr8	143915152	143976734	chr8:143915152-143976734	1	-	143916176	143975369	789624	32	7243,99,105,84,357,139,179,158,184,127,155,153,126,96,105,162,78,319,155,94,128,96,120,107,116,167,93,78,90,62,199,32,	0,11631,11824,12099,12257,12701,13950,14261,14493,14783,14991,15231,16381,16784,16977,17247,17482,17640,18044,18845,19165,19482,19657,19858,20045,20695,21826,22012,22998,23478,60024,61550,
#Partially deleted in new
chr8	143916176	143975369	chr8:143916176-143975369	3	-	143916176	143975369	0	32	6219,3381,99,105,84,357,139,179,158,184,127,155,153,126,96,105,162,78,319,155,94,128,96,120,95,116,167,93,78,90,62,193,	0,6327,10607,10800,11075,11233,11677,12926,13237,13469,13759,13967,14207,15357,15760,15953,16223,16458,16616,17020,17821,18141,18458,18633,18846,19021,19671,20802,20988,21974,22454,59000,
#Partially deleted in new
chr8	143932399	143975375	chr8:143932399-143975375	0	-	143932399	143975369	789624	18	162,78,319,155,94,128,96,120,107,116,167,93,78,36,90,15,62,199,	0,235,393,797,1598,1918,2235,2410,2611,2798,3448,4579,4765,5349,5751,6001,6231,42777,
#Deleted in new
chr8	143935276	143946405	chr8:143935276-143946405	0	-	143935276	143946392	789624	7	37,167,93,78,90,62,56,	0,571,1702,1888,2874,3354,11073,
#Deleted in new
chr8	143935917	143946547	chr8:143935917-143946547	0	-	143935917	143937224	789624	6	97,93,78,90,62,163,	0,1061,1247,2233,2713,10467,
#Partially deleted in new
chr8	143935978	143958799	chr8:143935978-143958799	0	-	143935978	143958757	789624	6	36,93,78,90,62,205,	0,1000,1186,2172,2652,22616,
#Partially deleted in new
chr8	143937663	143975219	chr8:143937663-143975219	0	-	143937663	143937663	8553170	4	121,90,62,43,	0,487,967,37513,
#Deleted in new
chr8	143945190	143945279	chr8:143945190-143945279	3	-	143945190	143945190	5263520	1	89,	0,
#Partially deleted in new
chr8	143977152	143986446	chr8:143977152-143986446	1	-	143977483	143986359	789624	11	678,175,134,645,70,222,785,237,255,179,89,	0,754,5779,6014,6882,7057,7391,8259,8568,8902,9205,
#Partially deleted in new
chr8	143977152	143984358	chr8:143977152-143984358	0	-	143977152	143977152	8553170	4	678,175,134,1192,	0,754,5779,6014,
#Partially deleted in new
chr8	143977159	143986454	chr8:143977159-143986454	3	-	143977483	143986359	0	11	671,175,134,645,97,222,785,237,255,179,97,	0,747,5772,6007,6848,7050,7384,8252,8561,8895,9198,
#Partially deleted in new
chr8	143977382	143986460	chr8:143977382-143986460	1	-	143977483	143986271	789624	10	448,175,134,645,97,222,785,237,255,406,	0,524,5549,5784,6625,6827,7161,8029,8338,8672,
#Partially deleted in new
chr8	143977452	143986422	chr8:143977452-143986422	0	-	143983047	143986359	789624	11	378,175,134,500,97,222,785,237,255,179,65,	0,454,5479,5859,6555,6757,7091,7959,8268,8602,8905,
#Deleted in new
chr8	143983841	143984639	chr8:143983841-143984639	0	-	143983841	143983841	8553170	3	263,222,96,	0,368,702,
#Deleted in new
chr8	143984727	143986430	chr8:143984727-143986430	0	-	143984727	143986359	789624	4	601,237,179,73,	0,684,1327,1630,
#Deleted in new
chr8	143984982	143986454	chr8:143984982-143986454	0	-	143984982	143984982	8553170	4	346,237,255,97,	0,429,738,1375,
#Deleted in new
chr8	143985491	143986141	chr8:143985491-143986141	0	-	143985491	143985491	8553170	2	484,87,	0,563,
#Partially deleted in new
chr8	143985549	143990933	chr8:143985549-143990933	0	-	143985549	143986359	789624	5	99,255,179,78,328,	0,171,505,808,5056,
#Partially deleted in new
chr8	143985568	143990269	chr8:143985568-143990269	0	-	143985568	143986359	789624	5	80,255,179,78,93,	0,152,486,789,4608,
#Deleted in new
chr8	143985717	143987181	chr8:143985717-143987181	0	-	143985717	143986359	789624	4	258,179,81,46,	0,337,640,1418,
#Deleted in new
chr8	143985723	143987144	chr8:143985723-143987144	0	-	143985723	143986359	789624	4	252,179,81,66,	0,331,634,1355,
#Deleted in new
chr8	143985724	143987099	chr8:143985724-143987099	0	-	143985724	143986359	789624	4	251,179,81,185,	0,330,633,1190,
#Partially deleted in new
chr8	143985749	143991135	chr8:143985749-143991135	0	-	143985749	143986359	789624	4	226,179,81,103,	0,305,608,5283,
#Partially deleted in new
chr8	143985770	143991039	chr8:143985770-143991039	0	-	143985770	143986359	789624	4	205,179,81,434,	0,284,587,4835,
#Partially deleted in new
chr8	143985836	143988965	chr8:143985836-143988965	0	-	143985836	143986359	789624	4	139,179,81,130,	0,218,521,2999,
#Deleted in new
chr8	143985848	143986460	chr8:143985848-143986460	0	-	143985848	143985848	8553170	2	385,103,	0,509,
#Partially deleted in new
chr8	143985890	144012772	chr8:143985890-144012772	0	-	143985890	143986359	789624	4	85,179,81,243,	0,164,467,26639,
#Partially deleted in new
chr8	143985907	143991188	chr8:143985907-143991188	0	-	143985907	143986359	789624	4	68,179,78,156,	0,147,450,5125,
#Deleted in new
chr8	143985913	143986932	chr8:143985913-143986932	0	-	143985913	143986359	789624	4	62,179,81,178,	0,141,444,841,
#Partially deleted in new
chr8	143986356	143989987	chr8:143986356-143989987	0	-	143986356	143986356	8553170	2	79,471,	0,3160,
#Partially deleted in new
chr8	143986362	143989985	chr8:143986362-143989985	0	-	143986362	143986362	8553170	2	76,469,	0,3154,
#Deleted in new
chr8	143990057	143993415	chr8:143990057-143993415	3	+	143991223	143992841	789624	7	254,403,113,201,129,144,724,	0,1142,1634,1820,2187,2407,2634,
#Deleted in new
chr8	143990082	143992373	chr8:143990082-143992373	0	+	143991223	143992373	789624	5	229,403,113,201,129,	0,1117,1609,1795,2162,
#Deleted in new
chr8	143990099	143993415	chr8:143990099-143993415	1	+	143991223	143992841	789624	7	100,403,113,201,129,144,724,	0,1100,1592,1778,2145,2365,2592,
#Deleted in new
chr8	143990676	143991526	chr8:143990676-143991526	0	+	143991223	143991526	789624	2	231,327,	0,523,
#Deleted in new
chr8	143991293	143991963	chr8:143991293-143991963	0	+	143991293	143991293	8553170	2	511,86,	0,584,
#Deleted in new
chr8	143991453	143992839	chr8:143991453-143992839	0	+	143991453	143992839	789624	5	149,113,496,144,148,	0,238,424,1011,1238,
#Deleted in new
chr8	143991532	143992508	chr8:143991532-143992508	0	+	143991532	143991532	8553170	3	70,682,44,	0,159,932,
#Deleted in new
chr8	143991555	143992822	chr8:143991555-143992822	0	+	143991555	143992822	789624	5	47,113,129,144,131,	0,136,689,909,1136,
#Deleted in new
chr8	143991746	143993094	chr8:143991746-143993094	0	+	143991746	143992841	789624	5	58,72,129,144,403,	0,131,498,718,945,
#Deleted in new
chr8	143992173	143992974	chr8:143992173-143992974	0	+	143992173	143992173	8553170	3	200,144,283,	0,291,518,
#Partially deleted in new
chr8	144012413	144047085	chr8:144012413-144047085	3	+	144012515	144046956	789624	5	313,555,540,140,459,	0,27495,28154,28818,34213,
#Partially deleted in new
chr8	144012425	144047025	chr8:144012425-144047025	1	+	144012515	144046646	789624	4	301,555,540,399,	0,27483,28142,34201,
#Deleted in new
chr8	144049078	144051203	chr8:144049078-144051203	7	+	144049078	144049078	16724991	7	821,73,156,90,64,80,90,	0,908,1224,1460,1716,1863,2035,
#Deleted in new
chr8	144049556	144051522	chr8:144049556-144051522	5	+	144049556	144049556	16724991	5	343,73,156,90,728,	0,430,746,982,1238,
#Deleted in new
chr8	144051265	144060703	chr8:144051265-144060703	3	-	144051325	144060032	789624	27	207,98,161,158,150,135,147,185,175,102,161,152,113,139,138,171,113,266,68,139,166,196,124,100,192,224,51,	0,463,650,903,1183,1500,1717,1943,3295,3546,3763,4522,4881,5119,5352,5682,5942,6182,6590,6744,6973,7230,7507,7714,8333,8596,9387,
#Deleted in new
chr8	144052769	144054653	chr8:144052769-144054653	0	-	144052769	144052769	8553170	3	131,411,93,	0,213,1791,
#Deleted in new
chr8	144053212	144054879	chr8:144053212-144054879	0	-	144053212	144053212	8553170	2	181,319,	0,1348,
#Deleted in new
chr8	144057320	144057380	chr8:144057320-144057380	3	-	144057320	144057320	5263520	1	60,	0,
#Partially deleted in new
chr8	144058886	144063965	chr8:144058886-144063965	0	-	144058886	144063934	789624	5	10,100,192,224,266,	0,93,712,975,4813,
#Deleted in new
chr8	144078001	144079265	chr8:144078001-144079265	3	-	144078001	144078001	8553170	1	1264,	0,
#Deleted in new
chr8	144078625	144080647	chr8:144078625-144080647	3	+	144078728	144080601	0	3	274,207,406,	0,1317,1616,
#Deleted in new
chr8	144078647	144080516	chr8:144078647-144080516	1	+	144078728	144080462	789624	3	252,79,275,	0,1295,1594,
#Deleted in new
chr8	144079422	144080579	chr8:144079422-144080579	0	+	144079702	144080579	789624	2	727,338,	0,819,
#Deleted in new
chr8	144079873	144079942	chr8:144079873-144079942	3	+	144079873	144079873	5263520	1	69,	0,
#Partially deleted in new
chr8	144082589	144084330	chr8:144082589-144084330	0	+	144082730	144083977	789624	6	215,180,36,148,102,197,	0,534,799,1124,1349,1544,
#Partially deleted in new
chr8	144082591	144083749	chr8:144082591-144083749	0	+	144082591	144082591	8553170	4	213,180,128,36,	0,532,797,1122,
#Partially deleted in new
chr8	144082609	144086216	chr8:144082609-144086216	3	+	144082730	144086125	789624	12	195,180,112,148,102,197,197,154,96,191,171,335,	0,514,779,1104,1329,1524,1803,2112,2433,2679,2963,3272,
#Partially deleted in new
chr8	144082613	144084747	chr8:144082613-144084747	0	+	144082730	144084747	789624	7	191,180,44,102,197,197,26,	0,510,1204,1325,1520,1799,2108,
#Partially deleted in new
chr8	144082621	144084274	chr8:144082621-144084274	0	+	144082621	144082621	8553170	5	183,180,473,102,141,	0,502,767,1317,1512,
#Partially deleted in new
chr8	144082625	144084585	chr8:144082625-144084585	0	+	144082730	144083977	789624	6	179,36,148,102,197,173,	0,763,1088,1313,1508,1787,
#Partially deleted in new
chr8	144082667	144086216	chr8:144082667-144086216	1	+	144082730	144086125	789624	11	137,112,148,102,197,197,154,96,191,171,335,	0,721,1046,1271,1466,1745,2054,2375,2621,2905,3214,
#Partially deleted in new
chr8	144082685	144084339	chr8:144082685-144084339	0	+	144082730	144084339	789624	6	119,180,112,148,60,206,	0,438,703,1028,1295,1448,
#Partially deleted in new
chr8	144082687	144084519	chr8:144082687-144084519	0	+	144082730	144084199	789624	7	117,180,112,148,102,220,107,	0,436,701,1026,1251,1423,1725,
#Partially deleted in new
chr8	144082904	144083737	chr8:144082904-144083737	0	+	144083196	144083737	789624	3	399,112,24,	0,484,809,
#Partially deleted in new
chr8	144083214	144084795	chr8:144083214-144084795	0	+	144083214	144083214	8553170	7	89,112,148,102,45,197,74,	0,174,499,724,1071,1198,1507,
#Partially deleted in new
chr8	144083252	144084325	chr8:144083252-144084325	0	+	144083252	144083252	8553170	3	609,102,192,	0,686,881,
#Partially deleted in new
chr8	144083988	144084849	chr8:144083988-144084849	0	+	144083988	144083988	8553170	4	52,112,197,128,	0,230,424,733,
#Partially deleted in new
chr8	144084127	144085095	chr8:144084127-144085095	0	+	144084127	144084127	8553170	2	482,374,	0,594,
#Partially deleted in new
chr8	144084190	144086185	chr8:144084190-144086185	0	+	144084190	144084190	8553170	5	140,197,758,171,304,	0,222,531,1382,1691,
#Partially deleted in new
chr8	144084736	144085446	chr8:144084736-144085446	0	+	144084736	144084736	8553170	2	139,404,	0,306,
#Partially deleted in new
chr8	144084792	144086183	chr8:144084792-144086183	0	+	144084792	144084792	8553170	4	83,96,455,302,	0,250,496,1089,
#Partially deleted in new
chr8	144084851	144086184	chr8:144084851-144086184	0	+	144084851	144084851	8553170	3	287,191,612,	0,437,721,
#Deleted in new
chr8	144095026	144097525	chr8:144095026-144097525	3	+	144095099	144097336	0	7	202,197,127,158,161,101,294,	0,806,1097,1310,1557,2007,2205,
#Deleted in new
chr8	144095038	144097525	chr8:144095038-144097525	0	+	144095038	144095038	8553170	6	991,127,158,161,101,294,	0,1085,1298,1545,1995,2193,
#Deleted in new
chr8	144095485	144096515	chr8:144095485-144096515	0	+	144095485	144095485	8553170	3	544,108,179,	0,657,851,
#Deleted in new
chr8	144096344	144097176	chr8:144096344-144097176	0	+	144096344	144096344	8553170	2	400,143,	0,689,
#Deleted in new
chr8	144098632	144099322	chr8:144098632-144099322	0	-	144098877	144099322	789624	3	362,125,46,	0,448,644,
#Partially deleted in new
chr8	144098636	144104237	chr8:144098636-144104237	0	-	144098935	144103753	0	8	152,129,154,109,142,141,175,685,	0,229,640,873,1066,1292,4414,4916,
#Partially deleted in new
chr8	144098636	144104190	chr8:144098636-144104190	3	-	144098877	144103753	0	9	152,129,125,154,109,142,141,175,638,	0,229,444,640,873,1066,1292,4414,4916,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	144099249	144100842	chr8:144099249-144100842	0	-	144099249	144099249	8553170	5	181,109,142,141,100,	0,260,453,679,1493,
#Partially deleted in new
chr8	144099290	144104250	chr8:144099290-144104250	0	-	144099290	144099290	8553170	6	140,109,142,141,175,226,	0,219,412,638,3760,4734,
#Deleted in new
chr8	144099300	144099989	chr8:144099300-144099989	0	-	144099300	144099300	8553170	3	318,142,61,	0,402,628,
#Partially deleted in new
chr8	144099518	144104269	chr8:144099518-144104269	0	-	144099518	144099518	8553170	5	100,142,141,175,423,	0,184,410,3532,4328,
#Deleted in new
chr8	144102641	144104096	chr8:144102641-144104096	0	-	144102641	144102641	8553170	2	584,72,	0,1383,
#Deleted in new
chr8	144102816	144103756	chr8:144102816-144103756	0	-	144102816	144102816	8553170	2	409,204,	0,736,
#Deleted in new
chr8	144103116	144108124	chr8:144103116-144108124	0	-	144103116	144103116	8553170	3	109,136,107,	0,2610,4901,
#Deleted in new
chr8	144104498	144107611	chr8:144104498-144107611	3	+	144105683	144107109	0	8	360,127,129,166,122,120,129,524,	0,1141,1370,1577,1844,2056,2336,2589,
#Deleted in new
chr8	144104511	144107611	chr8:144104511-144107611	1	+	144105683	144107109	789624	7	347,127,129,166,332,129,524,	0,1128,1357,1564,1831,2323,2576,
#Deleted in new
chr8	144104974	144107217	chr8:144104974-144107217	1	+	144105683	144107109	0	8	175,127,129,166,122,120,129,130,	0,665,894,1101,1368,1580,1860,2113,
#Deleted in new
chr8	144104977	144105995	chr8:144104977-144105995	0	+	144105683	144105995	789624	3	483,127,127,	0,662,891,
#Deleted in new
chr8	144105082	144106881	chr8:144105082-144106881	0	+	144105683	144106881	789624	6	67,127,129,166,332,47,	0,557,786,993,1260,1752,
#Deleted in new
chr8	144106600	144107392	chr8:144106600-144107392	0	+	144106600	144107255	789624	2	74,558,	0,234,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr8	144107725	144118315	chr8:144107725-144118315	3	+	144107750	144116293	789624	24	137,137,629,122,700,143,237,91,133,122,61,150,258,126,84,78,225,186,198,122,163,518,71,2225,	0,333,590,1323,1609,2388,2615,2923,3138,3375,3700,3906,4161,4498,4721,5714,5931,6251,6552,6828,7023,7615,8217,8365,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr8	144107725	144118315	chr8:144107725-144118315	0	+	144107750	144111310	789624	23	137,137,629,122,700,143,237,91,133,386,150,258,126,84,78,225,186,198,122,163,518,71,2225,	0,333,590,1323,1609,2388,2615,2923,3138,3375,3906,4161,4498,4721,5714,5931,6251,6552,6828,7023,7615,8217,8365,
#Deleted in new
chr8	144109698	144116390	chr8:144109698-144116390	0	+	144109698	144109698	8553170	12	336,626,133,681,258,84,442,699,163,518,71,300,	0,415,1165,1402,2188,2748,3741,4278,5050,5642,6244,6392,
#Deleted in new
chr8	144109726	144116382	chr8:144109726-144116382	0	+	144109726	144109726	8553170	10	2055,258,126,84,225,699,163,518,71,292,	0,2160,2497,2720,3930,4250,5022,5614,6216,6364,
#Deleted in new
chr8	144109726	144111205	chr8:144109726-144111205	0	+	144109726	144109726	8553170	6	308,143,237,91,105,105,	0,387,614,922,1165,1374,
#Deleted in new
chr8	144112468	144116383	chr8:144112468-144116383	0	+	144112468	144112468	8553170	7	1413,499,122,163,518,71,293,	0,1508,2085,2280,2872,3474,3622,
#Deleted in new
chr8	144137768	144140843	chr8:144137768-144140843	3	+	144137835	144139552	789624	6	660,101,99,92,123,1456,	0,738,946,1240,1420,1619,
#Deleted in new
chr8	144137803	144140724	chr8:144137803-144140724	0	+	144137835	144138364	789624	7	215,139,101,99,92,123,1337,	0,486,703,911,1205,1385,1584,
#Deleted in new
chr8	144137809	144138797	chr8:144137809-144138797	0	+	144137809	144137809	8553170	2	619,83,	0,905,
#Deleted in new
chr8	144137835	144138364	chr8:144137835-144138364	1	+	144137835	144138364	789624	2	183,75,	0,454,
#Deleted in new
chr8	144138465	144139108	chr8:144138465-144139108	0	+	144138465	144138465	8553170	2	149,394,	0,249,
#Deleted in new
chr8	144138682	144139420	chr8:144138682-144139420	0	+	144138682	144138682	8553170	3	418,123,33,	0,506,705,
#Deleted in new
chr8	144138758	144140713	chr8:144138758-144140713	0	+	144138758	144138758	8553170	3	342,123,1326,	0,430,629,
#Deleted in new
chr8	144141213	144143664	chr8:144141213-144143664	7	-	144141213	144141213	16724991	7	105,116,123,62,191,106,204,	0,513,761,1210,1368,1769,2247,
#Partially deleted in new
chr8	144148015	144250753	chr8:144148015-144250753	0	+	144148015	144148015	8553170	31	61,78,146,132,163,99,152,141,93,79,114,74,123,108,145,41,142,53,108,120,123,147,123,80,115,96,105,136,113,153,542,	0,15755,20279,31439,32162,32409,42768,43699,44293,51106,52412,72584,75092,90740,91019,91307,91598,92085,92554,92976,93379,94353,95478,95847,96206,96428,97140,99285,99551,100861,102196,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr8	144148016	144193282	chr8:144148016-144193282	0	+	144148016	144148016	8553170	10	60,120,78,146,132,163,99,152,141,974,	0,12953,15754,20278,31438,32161,32408,42767,43698,44292,
#Partially deleted in new
chr8	144148035	144213467	chr8:144148035-144213467	1	+	144163826	144213121	789624	12	41,78,146,132,163,99,152,141,93,79,114,474,	0,15735,20259,31419,32142,32389,42748,43679,44273,51086,52392,64958,
#Partially deleted in new
chr8	144148644	144261809	chr8:144148644-144261809	1	+	144163826	144261740	789624	42	68,78,146,132,163,99,152,141,93,79,114,74,123,108,145,41,142,53,108,120,123,147,123,80,115,96,105,136,113,153,155,166,197,138,115,147,189,156,135,103,66,155,	0,15126,19650,30810,31533,31780,42139,43070,43664,50477,51783,71955,74463,90111,90390,90678,90969,91456,91925,92347,92750,93724,94849,95218,95577,95799,96511,98656,98922,100232,101567,106168,106864,110132,110595,111266,111541,112032,112262,112469,112639,113010,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr8	144148809	144252668	chr8:144148809-144252668	0	+	144148809	144148809	8553170	31	73,78,146,132,163,99,152,141,93,79,114,74,123,108,145,41,142,53,108,120,123,147,123,80,115,96,105,136,113,153,2457,	0,14961,19485,30645,31368,31615,41974,42905,43499,50312,51618,71790,74298,89946,90225,90513,90804,91291,91760,92182,92585,93559,94684,95053,95412,95634,96346,98491,98757,100067,101402,
#Boundary problem: need 43, got 0, diff 43, mapped 0.0
chr8	144161024	144261927	chr8:144161024-144261927	3	+	144163826	144261740	789624	43	65,78,146,132,163,99,152,141,93,79,114,74,123,108,145,41,142,53,108,120,123,147,27,123,80,115,96,105,136,113,153,155,166,197,138,115,147,189,156,135,103,66,273,	0,2746,7270,18430,19153,19400,29759,30690,31284,38097,39403,59575,62083,77731,78010,78298,78589,79076,79545,79967,80370,81344,81577,82469,82838,83197,83419,84131,86276,86542,87852,89187,93788,94484,97752,98215,98886,99161,99652,99882,100089,100259,100630,
#Partially deleted in new
chr8	144163769	144261940	chr8:144163769-144261940	1	+	144163826	144261740	789624	42	79,146,132,163,99,152,141,93,79,114,74,123,108,145,41,142,53,108,120,123,147,27,123,80,115,96,105,136,113,153,155,166,197,138,115,147,189,156,135,103,66,286,	0,4525,15685,16408,16655,27014,27945,28539,35352,36658,56830,59338,74986,75265,75553,75844,76331,76800,77222,77625,78599,78832,79724,80093,80452,80674,81386,83531,83797,85107,86442,91043,91739,95007,95470,96141,96416,96907,97137,97344,97514,97885,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr8	144179454	144201179	chr8:144179454-144201179	0	+	144179454	144179454	8553170	8	132,163,99,152,141,93,79,752,	0,723,970,11329,12260,12854,19667,20973,
#Partially deleted in new
chr8	144199118	144214489	chr8:144199118-144214489	0	+	144199118	144199118	8553170	3	82,114,484,	0,1309,14887,
#Partially deleted in new
chr8	144239111	144261925	chr8:144239111-144261925	1	+	144247430	144261709	789624	26	68,41,142,53,108,120,123,305,123,80,115,96,105,136,153,155,166,197,138,115,147,189,156,135,236,271,	0,211,502,989,1458,1880,2283,3099,4382,4751,5110,5332,6044,8189,9765,11100,15701,16397,19665,20128,20799,21074,21565,21795,22002,22543,
#Deleted in new
chr8	144254421	144255637	chr8:144254421-144255637	0	+	144254421	144254421	8553170	2	557,129,	0,1087,
#Partially deleted in new
chr8	144262101	144291370	chr8:144262101-144291370	3	-	144262163	144291370	789624	16	216,108,85,289,181,133,70,81,162,213,102,118,155,81,210,99,	0,294,486,751,1119,1376,1590,1729,1879,2123,2413,2612,2815,14122,26993,29170,
#Deleted in new
chr8	144262615	144263557	chr8:144262615-144263557	0	-	144262615	144262615	8553170	2	173,705,	0,237,
#Deleted in new
chr8	144262672	144262737	chr8:144262672-144262737	3	-	144262672	144262672	5263520	1	65,	0,
#Partially deleted in new
chr8	144264341	144291370	chr8:144264341-144291370	0	-	144264341	144291370	789624	6	96,102,118,155,81,99,	0,173,372,575,11882,26930,
#Deleted in new
chr8	144264543	144265459	chr8:144264543-144265459	0	-	144264543	144264543	8553170	3	73,118,543,	0,170,373,
#Deleted in new
chr8	144264933	144266086	chr8:144264933-144266086	0	-	144264933	144264933	8553170	2	138,504,	0,649,
#Deleted in new
chr8	144266559	144268481	chr8:144266559-144268481	3	+	144266613	144268142	789624	2	621,378,	0,1544,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	144281683	144291367	chr8:144281683-144291367	0	-	144281683	144281683	8553170	3	250,210,96,	0,7411,9588,
#Partially deleted in new
chr8	144291590	144314668	chr8:144291590-144314668	1	+	144291757	144314218	789624	13	284,109,137,125,76,62,97,137,282,84,106,70,536,	0,17315,17864,18181,19583,19730,19914,20109,20372,21037,21920,22394,22542,
#Partially deleted in new
chr8	144291597	144314722	chr8:144291597-144314722	3	+	144291757	144314330	0	13	277,109,137,125,76,62,97,137,282,106,66,70,598,	0,17308,17857,18174,19576,19723,19907,20102,20365,21913,22248,22387,22527,
#Partially deleted in new
chr8	144292579	144311367	chr8:144292579-144311367	0	+	144308983	144311367	789624	6	69,107,137,125,76,47,	0,16328,16875,17192,18594,18741,
#Deleted in new
chr8	144309033	144314719	chr8:144309033-144314719	0	+	144309033	144309033	8553170	10	558,1478,62,97,137,282,106,66,70,595,	0,738,2287,2471,2666,2929,4477,4812,4951,5091,
#Deleted in new
chr8	144309195	144311382	chr8:144309195-144311382	0	+	144309195	144309195	8553170	4	396,125,76,62,	0,576,1978,2125,
#Deleted in new
chr8	144309268	144310094	chr8:144309268-144310094	0	+	144309268	144309268	8553170	2	323,323,	0,503,
#Deleted in new
chr8	144309457	144312091	chr8:144309457-144312091	0	+	144309457	144311336	789624	6	134,125,62,97,137,129,	0,314,1863,2047,2242,2505,
#Deleted in new
chr8	144310398	144314716	chr8:144310398-144314716	0	+	144310398	144310398	8553170	8	851,62,97,137,282,106,209,592,	0,922,1106,1301,1564,3112,3447,3726,
#Deleted in new
chr8	144311053	144311610	chr8:144311053-144311610	0	+	144311053	144311053	8553170	3	196,62,106,	0,267,451,
#Deleted in new
chr8	144311174	144311887	chr8:144311174-144311887	0	+	144311174	144311174	8553170	3	208,97,188,	0,330,525,
#Deleted in new
chr8	144311765	144314176	chr8:144311765-144314176	0	+	144311765	144312214	789624	7	71,103,84,106,66,70,52,	0,376,862,1745,2080,2219,2359,
#Deleted in new
chr8	144312612	144314720	chr8:144312612-144314720	0	+	144312612	144312612	8553170	3	1004,124,596,	0,1233,1512,
#Deleted in new
chr8	144313040	144314204	chr8:144313040-144314204	0	+	144313040	144313040	8553170	2	576,359,	0,805,
#Partially deleted in new
chr8	144314583	144326910	chr8:144314583-144326910	3	-	144316553	144326636	789624	17	2126,63,88,66,113,45,42,39,104,75,102,106,53,86,41,88,474,	0,2269,2438,2603,2749,2960,3087,3200,3330,3511,3677,3877,4115,4251,4444,6737,11853,
#Deleted in new
chr8	144314589	144315138	chr8:144314589-144315138	3	-	144314589	144314589	8553170	2	231,213,	0,336,
#Deleted in new
chr8	144314589	144315138	chr8:144314589-144315138	0	-	144314589	144314589	8553170	2	231,213,	0,336,
#Deleted in new
chr8	144316319	144318724	chr8:144316319-144318724	0	-	144316319	144316319	8553170	12	390,63,231,113,45,42,39,104,75,102,106,26,	0,533,702,1013,1224,1351,1464,1594,1775,1941,2141,2379,
#Partially deleted in new
chr8	144316324	144326910	chr8:144316324-144326910	1	-	144316575	144326636	789624	10	385,63,75,102,106,53,86,41,88,474,	0,528,697,1936,2136,2374,2510,2703,4996,10112,
#Deleted in new
chr8	144316842	144317633	chr8:144316842-144317633	0	-	144316842	144316842	8553170	3	73,231,301,	0,179,490,
#Deleted in new
chr8	144317074	144318321	chr8:144317074-144318321	0	-	144317074	144317074	8553170	7	35,45,42,39,104,75,61,	0,469,596,709,839,1020,1186,
#Deleted in new
chr8	144317245	144317315	chr8:144317245-144317315	3	-	144317245	144317245	5263520	1	70,	0,
#Partially deleted in new
chr8	144317916	144326674	chr8:144317916-144326674	0	-	144317916	144317916	8553170	8	101,268,106,53,86,41,88,238,	0,178,544,782,918,1111,3404,8520,
#Partially deleted in new
chr8	144318093	144326667	chr8:144318093-144326667	0	-	144318093	144318093	8553170	6	76,306,53,86,88,231,	0,167,605,741,3227,8343,
#Deleted in new
chr8	144330564	144336281	chr8:144330564-144336281	3	-	144333184	144336169	789624	2	3552,227,	0,5490,
#Deleted in new
chr8	144352218	144354070	chr8:144352218-144354070	0	-	144352218	144352218	8553170	2	1645,117,	0,1735,
#Deleted in new
chr8	144353227	144355609	chr8:144353227-144355609	3	-	144355530	144355609	789624	6	300,86,196,95,151,768,	0,550,726,1009,1389,1614,
#Deleted in new
chr8	144353227	144354914	chr8:144353227-144354914	3	-	144353347	144354767	789624	5	300,86,196,95,298,	0,550,726,1009,1389,
#Deleted in new
chr8	144353313	144354845	chr8:144353313-144354845	0	-	144353313	144354767	789624	4	214,86,196,229,	0,464,640,1303,
#Deleted in new
chr8	144354134	144359700	chr8:144354134-144359700	0	+	144359293	144359700	789624	3	177,240,78,	0,5049,5488,
#Deleted in new
chr8	144354643	144359297	chr8:144354643-144359297	0	+	144354643	144354643	8553170	3	47,352,114,	0,2607,4540,
#Deleted in new
chr8	144354652	144357454	chr8:144354652-144357454	0	+	144354652	144354652	8553170	2	193,204,	0,2598,
#Deleted in new
chr8	144355430	144358512	chr8:144355430-144358512	3	-	144355530	144358447	789624	9	248,247,232,114,108,132,64,159,481,	0,537,869,1169,1377,1559,2008,2197,2601,
#Deleted in new
chr8	144355430	144358472	chr8:144355430-144358472	1	-	144355530	144358447	789624	9	248,247,232,114,108,132,46,159,441,	0,537,869,1169,1377,1559,2026,2197,2601,
#Deleted in new
chr8	144355430	144357973	chr8:144355430-144357973	0	-	144355430	144355430	8553170	5	248,247,232,114,1166,	0,537,869,1169,1377,
#Deleted in new
chr8	144355430	144359376	chr8:144355430-144359376	0	-	144355430	144355430	8553170	8	248,247,232,114,108,513,1602,44,	0,537,869,1169,1377,1559,2197,3902,
#Deleted in new
chr8	144355514	144357068	chr8:144355514-144357068	0	-	144355514	144355514	8553170	5	164,232,114,108,79,	0,785,1085,1293,1475,
#Deleted in new
chr8	144356087	144356870	chr8:144356087-144356870	0	-	144356087	144356087	8553170	3	127,414,63,	0,212,720,
#Deleted in new
chr8	144356135	144356854	chr8:144356135-144356854	0	-	144356135	144356135	8553170	4	79,250,114,47,	0,164,464,672,
#Deleted in new
chr8	144356949	144357926	chr8:144356949-144357926	0	-	144356949	144356949	8553170	2	553,299,	0,678,
#Deleted in new
chr8	144357429	144358180	chr8:144357429-144358180	0	-	144357429	144357429	8553170	2	357,149,	0,602,
#Deleted in new
chr8	144358556	144361270	chr8:144358556-144361270	3	+	144359293	144361015	789624	5	54,240,871,124,468,	0,627,1066,2033,2246,
#Deleted in new
chr8	144358564	144361021	chr8:144358564-144361021	1	+	144359293	144361015	789624	5	336,240,871,124,219,	0,619,1058,2025,2238,
#Deleted in new
chr8	144358576	144360605	chr8:144358576-144360605	0	+	144359293	144360605	789624	4	34,240,379,16,	0,607,1538,2013,
#Deleted in new
chr8	144358580	144361270	chr8:144358580-144361270	1	+	144359293	144361015	789624	5	78,236,871,124,468,	0,607,1042,2009,2222,
#Deleted in new
chr8	144358592	144361272	chr8:144358592-144361272	1	+	144359293	144361015	789624	5	191,240,871,124,470,	0,591,1030,1997,2210,
#Deleted in new
chr8	144358592	144361286	chr8:144358592-144361286	1	+	144359293	144361015	789624	5	473,240,871,124,484,	0,591,1030,1997,2210,
#Deleted in new
chr8	144358592	144360009	chr8:144358592-144360009	0	+	144359293	144360009	789624	3	308,240,387,	0,591,1030,
#Deleted in new
chr8	144358594	144359899	chr8:144358594-144359899	0	+	144358594	144358594	8553170	2	829,277,	0,1028,
#Deleted in new
chr8	144358595	144361271	chr8:144358595-144361271	1	+	144359293	144361008	789624	3	15,240,469,	0,588,2207,
#Deleted in new
chr8	144358612	144361272	chr8:144358612-144361272	1	+	144359293	144361015	789624	5	453,240,871,124,470,	0,571,1010,1977,2190,
#Deleted in new
chr8	144358989	144360001	chr8:144358989-144360001	0	+	144358989	144358989	8553170	3	76,137,379,	0,194,633,
#Deleted in new
chr8	144359011	144360684	chr8:144359011-144360684	0	+	144359293	144360180	789624	5	54,240,125,322,95,	0,172,611,1160,1578,
#Partially deleted in new
chr8	144373100	144391064	chr8:144373100-144391064	0	+	144373100	144373100	8553170	6	160,83,104,150,76,209,	0,709,6286,9980,17570,17755,
#Partially deleted in new
chr8	144373836	144391710	chr8:144373836-144391710	0	+	144373836	144373836	8553170	8	56,104,150,76,196,141,114,131,	0,5550,9244,16834,17024,17297,17524,17743,
#Partially deleted in new
chr8	144374045	144393242	chr8:144374045-144393242	0	+	144374095	144390908	789624	14	62,104,150,76,196,141,114,287,82,79,92,253,117,274,	0,5341,9035,16625,16815,17088,17315,17534,17895,18046,18208,18399,18730,18923,
#Partially deleted in new
chr8	144374051	144393236	chr8:144374051-144393236	3	+	144374095	144393074	789624	15	56,104,150,76,201,141,114,132,84,82,79,92,253,117,268,	0,5335,9029,16619,16804,17082,17309,17528,17731,17889,18040,18202,18393,18724,18917,
#Partially deleted in new
chr8	144374054	144379421	chr8:144374054-144379421	0	+	144374054	144374054	8553170	3	53,172,35,	0,1411,5332,
#Partially deleted in new
chr8	144374060	144390884	chr8:144374060-144390884	0	+	144374060	144374060	8553170	5	47,104,150,74,214,	0,5326,9020,15202,16610,
#Partially deleted in new
chr8	144374075	144391055	chr8:144374075-144391055	0	+	144374095	144390678	789624	6	32,104,150,74,76,195,	0,5311,9005,15187,16595,16785,
#Deleted in new
chr8	144393228	144394416	chr8:144393228-144394416	0	-	144393228	144393228	8553170	6	137,139,130,278,67,38,	0,223,438,654,1005,1150,
#Deleted in new
chr8	144393228	144394441	chr8:144393228-144394441	1	-	144393317	144394441	789624	6	137,139,130,156,48,94,	0,223,438,654,884,1119,
#Partially deleted in new
chr8	144393230	144409349	chr8:144393230-144409349	3	-	144393317	144409158	0	38	135,139,130,156,48,67,177,153,142,85,91,117,153,144,90,207,175,137,179,142,114,90,81,75,98,52,123,88,94,111,140,147,152,81,134,28,158,61,	0,221,436,652,882,1003,1148,1413,1651,1867,2034,2204,3117,3367,3609,3976,4256,4512,4723,5071,5294,5548,5727,5897,6045,6221,6357,6550,6761,6935,7123,7440,7693,7980,8199,8415,15784,16058,
#Partially deleted in new
chr8	144393317	144409288	chr8:144393317-144409288	1	-	144393317	144409158	0	37	48,139,130,156,48,67,177,153,142,85,91,117,153,144,90,207,175,137,179,142,114,90,81,75,98,52,123,88,94,111,140,147,152,81,134,28,274,	0,134,349,565,795,916,1061,1326,1564,1780,1947,2117,3030,3280,3522,3889,4169,4425,4636,4984,5207,5461,5640,5810,5958,6134,6270,6463,6674,6848,7036,7353,7606,7893,8112,8328,15697,
#Deleted in new
chr8	144393564	144394237	chr8:144393564-144394237	0	-	144393564	144393564	8553170	2	26,571,	0,102,
#Deleted in new
chr8	144393698	144394716	chr8:144393698-144394716	0	-	144393698	144393698	8553170	5	98,156,48,322,73,	0,184,414,535,945,
#Deleted in new
chr8	144393882	144394761	chr8:144393882-144394761	0	-	144393882	144394761	789624	5	156,48,67,117,118,	0,230,351,496,761,
#Deleted in new
chr8	144394148	144394230	chr8:144394148-144394230	3	-	144394148	144394148	5263520	1	82,	0,
#Partially deleted in new
chr8	144394768	144409181	chr8:144394768-144409181	0	-	144394963	144409158	789624	6	28,142,81,134,28,167,	0,113,6442,6661,6877,14246,
#Deleted in new
chr8	144395312	144395979	chr8:144395312-144395979	0	-	144395312	144395312	8553170	2	43,545,	0,122,
#Deleted in new
chr8	144396014	144396730	chr8:144396014-144396730	0	-	144396014	144396014	8553170	2	486,133,	0,583,
#Deleted in new
chr8	144398522	144399346	chr8:144398522-144399346	0	-	144398522	144398522	8553170	4	116,90,81,219,	0,256,435,605,
#Deleted in new
chr8	144399219	144399807	chr8:144399219-144399807	0	-	144399219	144399219	8553170	2	154,356,	0,232,
#Deleted in new
chr8	144399799	144400986	chr8:144399799-144400986	0	-	144399799	144399799	8553170	5	69,94,328,147,63,	0,192,366,871,1124,
#Deleted in new
chr8	144399808	144401675	chr8:144399808-144401675	0	-	144399808	144399808	8553170	8	60,285,140,147,152,81,134,30,	0,183,545,862,1115,1402,1621,1837,
#Deleted in new
chr8	144400085	144400165	chr8:144400085-144400165	3	-	144400085	144400085	5263520	1	80,	0,
#Deleted in new
chr8	144400276	144400345	chr8:144400276-144400345	3	-	144400276	144400276	5263520	1	69,	0,
#Deleted in new
chr8	144409491	144409976	chr8:144409491-144409976	3	+	144409491	144409491	8553170	1	485,	0,
#Partially deleted in new
chr8	144409741	144413571	chr8:144409741-144413571	0	-	144409741	144409741	8553170	5	180,104,188,153,59,	0,2821,3017,3495,3771,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	144410394	144413585	chr8:144410394-144413585	0	-	144410394	144410394	8553170	3	2552,153,73,	0,2842,3118,
#Deleted in new
chr8	144412413	144416512	chr8:144412413-144416512	1	-	144412537	144416208	789624	11	253,188,153,55,132,138,173,172,137,193,703,	0,345,823,1099,1336,1544,1848,2311,2560,2813,3396,
#Deleted in new
chr8	144412413	144416895	chr8:144412413-144416895	3	-	144412537	144416789	789624	12	253,188,153,55,132,138,173,172,137,193,282,298,	0,345,823,1099,1336,1544,1848,2311,2560,2813,3396,4184,
#Deleted in new
chr8	144412413	144413569	chr8:144412413-144413569	0	-	144412413	144412413	8553170	3	253,188,57,	0,345,1099,
#Deleted in new
chr8	144412413	144413586	chr8:144412413-144413586	0	-	144412413	144412413	8553170	4	253,188,153,74,	0,345,823,1099,
#Deleted in new
chr8	144412414	144413591	chr8:144412414-144413591	0	-	144412414	144412414	8553170	3	252,188,355,	0,344,822,
#Deleted in new
chr8	144413339	144414081	chr8:144413339-144414081	0	-	144413339	144413339	8553170	4	50,55,132,124,	0,173,410,618,
#Deleted in new
chr8	144414865	144416819	chr8:144414865-144416819	0	-	144414865	144416789	789624	4	31,137,193,222,	0,108,361,1732,
#Partially deleted in new
chr8	144423600	144428563	chr8:144423600-144428563	3	-	144423804	144426945	789624	10	322,92,54,102,106,90,38,29,71,75,	0,440,614,1117,1345,2082,2425,2579,3308,4888,
#Partially deleted in new
chr8	144423600	144428563	chr8:144423600-144428563	1	-	144423886	144426945	789624	9	532,54,102,106,90,38,29,71,75,	0,614,1117,1345,2082,2425,2579,3308,4888,
#Deleted in new
chr8	144423616	144426983	chr8:144423616-144426983	1	-	144423804	144426945	789624	9	306,92,54,102,106,90,38,29,75,	0,424,598,1101,1329,2066,2409,2563,3292,
#Deleted in new
chr8	144423616	144426983	chr8:144423616-144426983	0	-	144423616	144423616	8553170	3	1435,526,75,	0,2066,3292,
#Deleted in new
chr8	144423616	144426983	chr8:144423616-144426983	1	-	144423886	144426945	789624	8	516,54,102,106,90,38,29,75,	0,598,1101,1329,2066,2409,2563,3292,
#Deleted in new
chr8	144423619	144426983	chr8:144423619-144426983	0	-	144426021	144426945	789624	7	303,92,605,827,189,29,75,	0,421,595,1326,2255,2560,3289,
#Deleted in new
chr8	144423620	144426983	chr8:144423620-144426983	0	-	144423620	144423620	8553170	5	302,92,605,1263,75,	0,420,594,1325,3288,
#Deleted in new
chr8	144423621	144426983	chr8:144423621-144426983	0	-	144423621	144423621	8553170	6	511,54,102,106,90,958,	0,593,1096,1324,2061,2404,
#Deleted in new
chr8	144423630	144426983	chr8:144423630-144426983	0	-	144426021	144426945	789624	8	292,92,54,102,827,142,29,75,	0,410,584,1087,1315,2291,2549,3278,
#Deleted in new
chr8	144423671	144426998	chr8:144423671-144426998	0	-	144423671	144423671	8553170	7	251,92,54,1055,38,29,90,	0,369,543,1046,2354,2508,3237,
#Partially deleted in new
chr8	144423863	144428548	chr8:144423863-144428548	0	-	144423863	144426945	789624	10	59,92,54,102,55,90,38,29,71,60,	0,177,351,854,1082,1819,2162,2316,3045,4625,
#Partially deleted in new
chr8	144424104	144428543	chr8:144424104-144428543	0	-	144424104	144426945	789624	9	28,54,102,106,90,38,29,71,55,	0,110,613,841,1578,1921,2075,2804,4384,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	144424964	144427294	chr8:144424964-144427294	0	-	144424964	144424964	8553170	4	36,90,183,386,	0,718,1061,1944,
#Partially deleted in new
chr8	144425395	144428543	chr8:144425395-144428543	0	-	144425395	144425395	8553170	5	377,38,29,71,55,	0,630,784,1513,3093,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	144425717	144428544	chr8:144425717-144428544	0	-	144425717	144426945	789624	5	55,38,29,383,56,	0,308,462,1191,2771,
#Partially deleted in new
chr8	144426470	144428543	chr8:144426470-144428543	0	-	144426470	144426470	8553170	2	509,55,	0,2018,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr8	144428774	144442856	chr8:144428774-144442856	0	-	144428774	144428774	8553170	17	562,134,74,1475,302,79,154,77,761,124,164,73,90,83,190,126,2139,	0,1629,2303,3510,5203,6036,6242,6699,6883,7783,7982,8252,9696,9878,11246,11576,11943,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr8	144428807	144444444	chr8:144428807-144444444	3	-	144429142	144444414	0	26	529,134,74,176,172,302,79,154,77,761,124,164,73,90,83,190,126,153,146,115,172,130,184,143,96,55,	0,1596,2270,3477,4780,5170,6003,6209,6666,6850,7750,7949,8219,9663,9845,11213,11543,11910,12158,13229,13433,13869,14330,15074,15372,15582,
#Deleted in new
chr8	144435550	144435619	chr8:144435550-144435619	3	-	144435550	144435550	5263520	1	69,	0,
#Partially deleted in new
chr8	144436604	144443347	chr8:144436604-144443347	1	-	144436644	144442777	789624	20	76,164,73,90,12,70,53,81,9,38,79,45,153,141,4,128,29,128,130,210,	0,152,422,1866,2048,2061,3416,3471,3554,3568,3746,3827,4113,4361,4503,5432,5562,5680,6072,6533,
#Partially deleted in new
chr8	144449581	144465035	chr8:144449581-144465035	3	-	144450378	144464901	789624	5	1189,212,239,153,227,	0,2777,3640,14878,15227,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	144449581	144457641	chr8:144449581-144457641	0	-	144449581	144449581	8553170	3	1189,212,4420,	0,2777,3640,
#Partially deleted in new
chr8	144449930	144462861	chr8:144449930-144462861	1	-	144450378	144462654	789624	4	840,212,239,579,	0,2428,3291,12352,
#Partially deleted in new
chr8	144450575	144465430	chr8:144450575-144465430	0	-	144450575	144464901	789624	5	195,212,239,288,78,	0,1783,2646,14233,14777,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	144451119	144457928	chr8:144451119-144457928	0	-	144451119	144451119	8553170	2	1451,4707,	0,2102,
#Partially deleted in new
chr8	144452035	144462415	chr8:144452035-144462415	0	-	144452035	144452035	8553170	3	535,239,133,	0,1186,10247,
#Deleted in new
chr8	144463816	144465677	chr8:144463816-144465677	1	-	144464126	144464901	789624	3	796,288,325,	0,992,1536,
#Deleted in new
chr8	144463816	144465489	chr8:144463816-144465489	1	-	144464126	144464901	789624	2	796,681,	0,992,
#Deleted in new
chr8	144463816	144465648	chr8:144463816-144465648	1	-	144464126	144464901	789624	3	796,288,78,	0,992,1754,
#Deleted in new
chr8	144463816	144465101	chr8:144463816-144465101	3	+	144463816	144463816	8553170	2	239,190,	0,1095,
#Deleted in new
chr8	144464274	144465434	chr8:144464274-144465434	0	-	144464274	144464901	789624	3	338,288,227,	0,534,933,
#Deleted in new
chr8	144464577	144465667	chr8:144464577-144465667	0	-	144464577	144464901	789624	3	35,288,258,	0,231,832,
#Deleted in new
chr8	144464580	144465428	chr8:144464580-144465428	0	-	144464580	144464580	8553170	2	516,76,	0,772,
#Partially deleted in new
chr8	144466042	144474202	chr8:144466042-144474202	0	+	144466042	144466042	8553170	17	476,79,152,139,146,66,129,78,115,110,109,158,105,122,124,130,1408,	0,717,916,1160,1442,1671,1816,2286,2493,2682,3228,3447,5899,6095,6318,6534,6752,
#Partially deleted in new
chr8	144466042	144474202	chr8:144466042-144474202	3	+	144466419	144473389	789624	18	476,79,152,139,146,66,129,78,115,110,109,158,105,122,124,130,257,1071,	0,717,916,1160,1442,1671,1816,2286,2493,2682,3228,3447,5899,6095,6318,6534,6752,7089,
#Partially deleted in new
chr8	144466351	144473296	chr8:144466351-144473296	0	+	144466419	144473296	789624	18	167,79,152,139,146,66,129,78,64,110,109,158,105,122,124,130,257,165,	0,408,607,851,1133,1362,1507,1977,2235,2373,2919,3138,5590,5786,6009,6225,6443,6780,
#Partially deleted in new
chr8	144466354	144474115	chr8:144466354-144474115	1	+	144466419	144473450	789624	17	164,79,152,139,146,66,129,78,115,110,109,158,105,122,124,130,1321,	0,405,604,848,1130,1359,1504,1974,2181,2370,2916,3135,5587,5783,6006,6222,6440,
#Deleted in new
chr8	144467260	144468439	chr8:144467260-144468439	0	+	144467260	144467260	8553170	3	81,503,111,	0,224,1068,
#Deleted in new
chr8	144467478	144468426	chr8:144467478-144468426	0	+	144467478	144467478	8553170	3	152,66,568,	0,235,380,
#Deleted in new
chr8	144468624	144469380	chr8:144468624-144469380	0	+	144468624	144468624	8553170	2	210,110,	0,646,
#Partially deleted in new
chr8	144469545	144473176	chr8:144469545-144473176	0	+	144469545	144469545	8553170	5	102,105,122,124,600,	0,2396,2592,2815,3031,
#Partially deleted in new
chr8	144470581	144472808	chr8:144470581-144472808	0	+	144470581	144470581	8553170	5	96,105,122,124,232,	0,1360,1556,1779,1995,
#Deleted in new
chr8	144473411	144476335	chr8:144473411-144476335	3	-	144474237	144475756	0	3	1645,105,753,	0,1745,2171,
#Deleted in new
chr8	144474872	144475823	chr8:144474872-144475823	0	-	144474872	144474872	8553170	3	184,67,241,	0,284,710,
#Partially deleted in new
chr8	144477968	144502120	chr8:144477968-144502120	0	+	144477968	144477968	8553170	9	159,179,833,1431,146,666,130,166,601,	0,12065,18492,19441,20947,22127,22873,23160,23551,
#Partially deleted in new
chr8	144477982	144496675	chr8:144477982-144496675	0	+	144477982	144477982	8553170	4	145,97,179,215,	0,603,12051,18478,
#Deleted in new
chr8	144478097	144479218	chr8:144478097-144479218	0	+	144478097	144478097	8553170	2	30,633,	0,488,
#Partially deleted in new
chr8	144478350	144496686	chr8:144478350-144496686	0	+	144478350	144478350	8553170	3	172,179,226,	0,11683,18110,
#Partially deleted in new
chr8	144490029	144502121	chr8:144490029-144502121	3	+	144497194	144501903	789624	11	183,993,71,146,104,125,126,76,130,166,602,	0,6431,8740,8886,10066,10237,10457,10656,10812,11099,11490,
#Partially deleted in new
chr8	144490040	144497390	chr8:144490040-144497390	0	+	144497194	144497390	789624	3	172,265,220,	0,6420,7130,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	144490093	144496762	chr8:144490093-144496762	0	+	144490093	144490093	8553170	3	119,137,302,	0,5526,6367,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	144495617	144498980	chr8:144495617-144498980	0	-	144495617	144495617	8553170	2	2544,81,	0,3282,
#Deleted in new
chr8	144496725	144502120	chr8:144496725-144502120	1	+	144497194	144501903	789624	10	728,71,146,104,125,126,76,130,166,601,	0,2044,2190,3370,3541,3761,3960,4116,4403,4794,
#Deleted in new
chr8	144497345	144500612	chr8:144497345-144500612	0	+	144497345	144497345	8553170	5	108,71,146,296,126,	0,1424,1570,2750,3141,
#Deleted in new
chr8	144497361	144499305	chr8:144497361-144499305	3	-	144497361	144497361	8553170	3	82,185,554,	0,615,1390,
#Deleted in new
chr8	144498912	144505444	chr8:144498912-144505444	0	-	144498912	144498912	8553170	4	284,85,114,73,	0,525,6052,6459,
#Deleted in new
chr8	144499025	144500954	chr8:144499025-144500954	0	+	144499025	144499025	8553170	5	36,104,346,76,113,	0,1070,1241,1660,1816,
#Deleted in new
chr8	144499333	144505098	chr8:144499333-144505098	0	-	144499333	144499333	8553170	2	189,134,	0,5631,
#Deleted in new
chr8	144501088	144502120	chr8:144501088-144502120	0	+	144501088	144501088	8553170	2	206,601,	0,431,
#Deleted in new
chr8	144502972	144507174	chr8:144502972-144507174	3	+	144504304	144507000	789624	12	153,166,90,109,134,244,80,137,175,156,113,265,	0,1328,1631,1798,2025,2273,2875,3022,3259,3528,3758,3937,
#Deleted in new
chr8	144503736	144506405	chr8:144503736-144506405	0	+	144503736	144503736	8553170	6	730,90,109,134,244,558,	0,867,1034,1261,1509,2111,
#Deleted in new
chr8	144504081	144507171	chr8:144504081-144507171	1	+	144504304	144507000	789624	11	385,90,109,134,244,80,137,175,156,113,262,	0,522,689,916,1164,1766,1913,2150,2419,2649,2828,
#Deleted in new
chr8	144504139	144504936	chr8:144504139-144504936	0	+	144504139	144504139	8553170	3	327,90,166,	0,464,631,
#Deleted in new
chr8	144504139	144504836	chr8:144504139-144504836	0	+	144504139	144504139	8553170	2	327,233,	0,464,
#Deleted in new
chr8	144504139	144506125	chr8:144504139-144506125	0	+	144504139	144504139	8553170	5	327,90,361,244,278,	0,464,631,1106,1708,
#Deleted in new
chr8	144504220	144505139	chr8:144504220-144505139	0	+	144504220	144504220	8553170	4	246,90,71,142,	0,383,588,777,
#Deleted in new
chr8	144509073	144511213	chr8:144509073-144511213	3	+	144509333	144511164	789624	5	942,148,125,110,223,	0,1286,1524,1720,1917,
#Deleted in new
chr8	144509079	144511181	chr8:144509079-144511181	0	+	144509079	144509079	789624	3	936,306,191,	0,1518,1911,
#Deleted in new
chr8	144509618	144510814	chr8:144509618-144510814	0	+	144509618	144509618	8553170	2	397,455,	0,741,
#Deleted in new
chr8	144510245	144511181	chr8:144510245-144511181	0	+	144510245	144510245	8553170	2	658,191,	0,745,
#Deleted in new
chr8	144511287	144517845	chr8:144511287-144517845	1	-	144511430	144516047	789624	20	268,109,157,181,170,130,292,263,142,180,174,84,137,93,132,127,777,141,95,244,	0,393,623,856,1104,1354,1559,1930,2283,2640,2901,3154,3648,3862,4038,4476,4700,5762,6126,6314,
#Deleted in new
chr8	144511290	144517826	chr8:144511290-144517826	3	-	144511430	144517784	0	21	265,109,157,181,170,130,292,263,142,180,174,84,137,93,132,127,777,141,95,34,126,	0,390,620,853,1101,1351,1556,1927,2280,2637,2898,3151,3645,3859,4035,4473,4697,5759,6123,6311,6410,
#Deleted in new
chr8	144511293	144512713	chr8:144511293-144512713	0	-	144512284	144512713	789624	5	262,109,157,181,72,	0,387,617,850,1348,
#Deleted in new
chr8	144511324	144512772	chr8:144511324-144512772	0	-	144511430	144512772	789624	6	231,109,166,181,170,131,	0,356,577,819,1067,1317,
#Deleted in new
chr8	144511389	144512373	chr8:144511389-144512373	0	-	144511389	144511389	8553170	3	166,109,49,	0,291,935,
#Deleted in new
chr8	144512452	144514514	chr8:144512452-144514514	0	-	144512452	144514514	789624	8	109,130,292,65,142,180,174,73,	0,189,394,963,1118,1475,1736,1989,
#Deleted in new
chr8	144512566	144513672	chr8:144512566-144513672	3	+	144512566	144512566	8553170	2	271,67,	0,1039,
#Deleted in new
chr8	144513570	144516003	chr8:144513570-144516003	0	-	144513570	144516003	789624	9	142,180,174,84,107,93,132,127,16,	0,357,618,871,1365,1579,1755,2193,2417,
#Deleted in new
chr8	144515857	144517499	chr8:144515857-144517499	0	-	144515857	144517499	789624	4	33,426,141,86,	0,130,1192,1556,
#Deleted in new
chr8	144516244	144517628	chr8:144516244-144517628	0	-	144517533	144517628	789624	4	417,141,140,27,	0,805,1169,1357,
#Deleted in new
chr8	144516832	144517572	chr8:144516832-144517572	0	-	144516832	144516832	8553170	2	358,159,	0,581,
#Deleted in new
chr8	144517991	144520811	chr8:144517991-144520811	0	+	144519725	144520811	789624	3	50,354,574,	0,1709,2246,
#Deleted in new
chr8	144518004	144522024	chr8:144518004-144522024	1	+	144519725	144521478	789624	5	37,67,440,585,1114,	0,744,1610,2233,2906,
#Deleted in new
chr8	144518006	144525178	chr8:144518006-144525178	3	+	144519725	144521478	789624	4	35,440,585,4268,	0,1608,2231,2904,
#Deleted in new
chr8	144518370	144519985	chr8:144518370-144519985	0	+	144519725	144519985	789624	2	445,285,	0,1330,
#Deleted in new
chr8	144518744	144520387	chr8:144518744-144520387	0	+	144519725	144520387	789624	3	71,440,150,	0,870,1493,
#Deleted in new
chr8	144519266	144520822	chr8:144519266-144520822	0	+	144519266	144519266	8553170	2	788,581,	0,975,
#Deleted in new
chr8	144522376	144527018	chr8:144522376-144527018	3	-	144522474	144524974	789624	5	1033,169,279,218,59,	0,1733,2064,2439,4583,
#Deleted in new
chr8	144522438	144527032	chr8:144522438-144527032	1	-	144522474	144524974	789624	5	971,160,279,218,73,	0,1671,2002,2377,4521,
#Deleted in new
chr8	144522581	144524446	chr8:144522581-144524446	0	+	144522581	144522581	8553170	3	752,470,186,	0,1054,1679,
#Deleted in new
chr8	144523271	144524291	chr8:144523271-144524291	0	+	144523271	144523271	8553170	2	62,31,	0,989,
#Deleted in new
chr8	144523662	144524871	chr8:144523662-144524871	0	+	144523662	144523662	8553170	3	147,182,611,	0,261,598,
#Deleted in new
chr8	144525732	144529132	chr8:144525732-144529132	3	-	144527341	144528916	789624	3	2055,49,372,	0,2291,3028,
#Deleted in new
chr8	144526218	144529092	chr8:144526218-144529092	1	-	144527967	144528916	789624	2	1854,332,	0,2542,
#Deleted in new
chr8	144526251	144529132	chr8:144526251-144529132	0	-	144527341	144528916	789624	4	388,828,49,372,	0,708,1772,2509,
#Deleted in new
chr8	144527323	144528556	chr8:144527323-144528556	0	-	144527341	144528556	789624	3	464,49,289,	0,700,944,
#Deleted in new
chr8	144528372	144529062	chr8:144528372-144529062	0	-	144528372	144529062	789624	2	99,302,	0,388,
#Partially deleted in new
chr8	144529178	144605816	chr8:144529178-144605816	3	-	144530421	144605614	789624	10	1438,170,92,200,74,562,1363,84,432,282,	0,1523,3126,3947,4950,16070,17948,26381,51667,76356,
#Partially deleted in new
chr8	144529178	144605699	chr8:144529178-144605699	1	-	144530421	144605614	789624	11	1438,170,92,200,74,93,562,1363,84,432,165,	0,1523,3126,3947,4950,8542,16070,17948,26381,51667,76356,
#Partially deleted in new
chr8	144537757	144545664	chr8:144537757-144545664	0	-	144537757	144537757	8553170	3	56,98,416,	0,6115,7491,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	144584039	144586488	chr8:144584039-144586488	3	+	144584039	144584039	8553170	2	168,230,	0,2219,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	144683168	144683464	chr8:144683168-144683464	3	+	144683168	144683168	8553170	1	296,	0,
#Deleted in new
chr8	144698613	144699185	chr8:144698613-144699185	3	-	144698613	144698613	8553170	1	572,	0,
#Partially deleted in new
chr8	144700352	144707206	chr8:144700352-144707206	7	+	144700352	144700352	16724991	2	126,297,	0,6557,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	144700658	144707532	chr8:144700658-144707532	4	+	144700658	144700658	16724991	2	70,623,	0,6251,
#Partially deleted in new
chr8	144700658	144707335	chr8:144700658-144707335	4	+	144700658	144700658	16724991	3	70,90,426,	0,5294,6251,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	144705533	144708517	chr8:144705533-144708517	5	+	144705533	144705533	16724991	3	172,288,64,	0,2160,2920,
#Deleted in new
chr8	144705629	144707157	chr8:144705629-144707157	4	+	144705629	144705629	16724991	2	413,248,	0,1280,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	144713898	144714845	chr8:144713898-144714845	3	+	144713898	144713898	8553170	1	947,	0,
#Partially deleted in new
chr8	144720906	144755486	chr8:144720906-144755486	0	-	144720906	144720906	8553170	3	116,117,82,	0,33298,34498,
#Partially deleted in new
chr8	144721128	144755605	chr8:144721128-144755605	3	-	144721643	144754728	789624	5	2254,114,130,108,201,	0,32554,33063,33567,34276,
#Deleted in new
chr8	144753453	144755441	chr8:144753453-144755441	0	-	144753629	144755441	789624	4	343,130,108,37,	0,738,1242,1951,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	144753680	144756417	chr8:144753680-144756417	0	-	144753680	144753680	8553170	2	116,2226,	0,511,
#Partially deleted in new
chr8	144773113	144787304	chr8:144773113-144787304	3	-	144773265	144780240	789624	6	1492,120,127,87,49,26,	0,4344,4924,5325,7118,14165,
#Partially deleted in new
chr8	144773113	144787325	chr8:144773113-144787325	1	-	144773265	144778471	789624	6	1492,120,127,87,53,47,	0,4344,4924,5325,7114,14165,
#Partially deleted in new
chr8	144773119	144787307	chr8:144773119-144787307	0	-	144773119	144773119	8553170	4	1486,488,53,29,	0,4918,7108,14159,
#Partially deleted in new
chr8	144773971	144780282	chr8:144773971-144780282	0	-	144773971	144778471	789624	4	634,127,87,55,	0,4066,4467,6256,
#Partially deleted in new
chr8	144774353	144787345	chr8:144774353-144787345	0	-	144774353	144780240	789624	5	252,127,87,49,67,	0,3684,4085,5878,12925,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	144785297	144785588	chr8:144785297-144785588	3	+	144785297	144785297	8553170	1	291,	0,
#Deleted in new
chr8	144789764	144790872	chr8:144789764-144790872	0	-	144789764	144789764	8553170	2	198,518,	0,590,
#Deleted in new
chr8	144789765	144792057	chr8:144789765-144792057	0	-	144791330	144792057	789624	5	197,116,219,100,66,	0,589,1511,2007,2226,
#Deleted in new
chr8	144789766	144792390	chr8:144789766-144792390	0	-	144789766	144789766	8553170	4	196,116,219,25,	0,588,1510,2599,
#Deleted in new
chr8	144789767	144791959	chr8:144789767-144791959	0	-	144789767	144789767	8553170	4	195,116,219,187,	0,587,1509,2005,
#Deleted in new
chr8	144789768	144792389	chr8:144789768-144792389	1	-	144789803	144792129	0	6	194,116,219,142,149,145,	0,586,1508,2004,2223,2476,
#Deleted in new
chr8	144789768	144792423	chr8:144789768-144792423	1	-	144789803	144792129	789624	5	194,116,34,149,58,	0,586,1508,2223,2597,
#Deleted in new
chr8	144789768	144792125	chr8:144789768-144792125	0	-	144789768	144789768	8553170	5	194,116,31,65,134,	0,586,1508,2081,2223,
#Deleted in new
chr8	144789769	144792587	chr8:144789769-144792587	3	-	144789803	144792129	0	6	193,116,219,142,149,222,	0,585,1507,2003,2222,2596,
#Deleted in new
chr8	144789784	144792351	chr8:144789784-144792351	1	-	144789803	144792129	0	5	178,116,219,142,360,	0,570,1492,1988,2207,
#Deleted in new
chr8	144789801	144792143	chr8:144789801-144792143	0	-	144790758	144792129	789624	6	161,116,86,219,142,152,	0,553,876,1475,1971,2190,
#Deleted in new
chr8	144789808	144792153	chr8:144789808-144792153	0	-	144789808	144792129	789624	6	154,116,31,125,142,162,	0,546,1468,1562,1964,2183,
#Deleted in new
chr8	144790354	144792384	chr8:144790354-144792384	0	-	144790354	144792129	789624	5	116,219,142,149,119,	0,922,1418,1637,1911,
#Deleted in new
chr8	144791112	144792421	chr8:144791112-144792421	0	-	144791112	144791112	8553170	3	802,149,56,	0,879,1253,
#Deleted in new
chr8	144791506	144792420	chr8:144791506-144792420	0	-	144791506	144791506	8553170	3	366,149,55,	0,485,859,
#Deleted in new
chr8	144791930	144791991	chr8:144791930-144791991	3	-	144791930	144791930	5263520	1	61,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	144798875	144809144	chr8:144798875-144809144	3	+	144802914	144808395	789624	5	62,78,127,114,1954,	0,3994,4765,5249,8315,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	144798875	144810076	chr8:144798875-144810076	0	+	144802914	144808395	789624	6	62,78,127,114,1296,859,	0,3994,4765,5249,8315,10342,
#Partially deleted in new
chr8	144798893	144811113	chr8:144798893-144811113	0	+	144798893	144798893	8553170	5	44,78,114,162,322,	0,3976,5231,11212,11898,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	144798902	144808977	chr8:144798902-144808977	0	+	144798902	144798902	8553170	3	35,1369,1787,	0,3967,8288,
#Partially deleted in new
chr8	144798916	144807327	chr8:144798916-144807327	0	+	144802914	144807327	789624	5	21,78,127,93,137,	0,3953,4724,5229,8274,
#Partially deleted in new
chr8	144802869	144811169	chr8:144802869-144811169	1	+	144802914	144810260	789624	4	78,127,114,1064,	0,771,1255,7236,
#Partially deleted in new
chr8	144802869	144808486	chr8:144802869-144808486	1	+	144802914	144808395	789624	4	78,127,114,1296,	0,771,1255,4321,
#Partially deleted in new
chr8	144802887	144808476	chr8:144802887-144808476	0	+	144802887	144808395	789624	3	60,114,1286,	0,1237,4303,
#Partially deleted in new
chr8	144827463	144841831	chr8:144827463-144841831	0	+	144829087	144841831	789624	5	146,48,127,117,477,	0,1579,2014,9927,13891,
#Partially deleted in new
chr8	144827517	144843222	chr8:144827517-144843222	1	+	144841395	144843168	789624	4	92,48,117,1868,	0,1525,9873,13837,
#Partially deleted in new
chr8	144827554	144841475	chr8:144827554-144841475	0	+	144827554	144827554	8553170	4	55,562,117,121,	0,1488,9836,13800,
#Partially deleted in new
chr8	144827558	144843220	chr8:144827558-144843220	1	+	144829087	144843168	789624	5	51,48,160,117,1866,	0,1484,1886,9832,13796,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	144827558	144847509	chr8:144827558-144847509	3	+	144829087	144846178	789624	5	51,48,127,117,1531,	0,1484,1919,9832,18420,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	144827559	144846195	chr8:144827559-144846195	1	+	144829087	144846178	789624	5	50,48,160,117,217,	0,1483,1885,9831,18419,
#Partially deleted in new
chr8	144827559	144841736	chr8:144827559-144841736	0	+	144827559	144827559	8553170	3	50,114,382,	0,9834,13795,
#Partially deleted in new
chr8	144827576	144841524	chr8:144827576-144841524	0	+	144827576	144827576	8553170	5	33,48,178,117,170,	0,1466,1850,9814,13778,
#Deleted in new
chr8	144827576	144829977	chr8:144827576-144829977	0	+	144827576	144827576	8553170	3	33,48,500,	0,1466,1901,
#Partially deleted in new
chr8	144827578	144841579	chr8:144827578-144841579	0	+	144829087	144841579	789624	5	31,48,127,114,225,	0,1464,1899,9815,13776,
#Partially deleted in new
chr8	144827578	144841394	chr8:144827578-144841394	0	+	144827578	144827578	8553170	6	31,222,48,82,117,40,	0,1150,1464,1944,9812,13776,
#Partially deleted in new
chr8	144827578	144841448	chr8:144827578-144841448	0	+	144829087	144841448	789624	6	31,48,127,99,117,94,	0,1464,1899,3352,9812,13776,
#Partially deleted in new
chr8	144827579	144841966	chr8:144827579-144841966	1	+	144829087	144841835	789624	6	30,46,48,127,114,148,	0,428,1463,1898,9814,14239,
#Partially deleted in new
chr8	144827582	144841782	chr8:144827582-144841782	0	+	144827582	144827582	8553170	3	27,114,428,	0,9811,13772,
#Partially deleted in new
chr8	144827596	144841475	chr8:144827596-144841475	0	+	144827596	144827596	8553170	4	295,48,117,121,	0,1446,9794,13758,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	144827617	144843772	chr8:144827617-144843772	1	+	144829087	144843168	789624	5	195,48,127,117,2418,	0,1425,1860,9773,13737,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	144829041	144838848	chr8:144829041-144838848	1	+	144829087	144838165	789624	4	49,127,117,841,	0,436,8349,8966,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	144833732	144843220	chr8:144833732-144843220	0	+	144833732	144833732	8553170	2	3775,1866,	0,7622,
#Partially deleted in new
chr8	144841041	144851174	chr8:144841041-144851174	0	-	144850663	144851174	789624	2	702,627,	0,9506,
#Partially deleted in new
chr8	144850165	144853067	chr8:144850165-144853067	1	-	144850663	144851338	789624	2	1230,75,	0,2827,
#Partially deleted in new
chr8	144850166	144853067	chr8:144850166-144853067	1	-	144850663	144851338	789624	2	1229,342,	0,2559,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	144850187	144853736	chr8:144850187-144853736	3	-	144850663	144851338	789624	2	1208,365,	0,3184,
#Partially deleted in new
chr8	144850218	144853034	chr8:144850218-144853034	1	-	144850663	144851338	789624	2	1177,196,	0,2620,
#Partially deleted in new
chr8	144850824	144852657	chr8:144850824-144852657	0	-	144850824	144851338	789624	2	571,278,	0,1555,
#Partially deleted in new
chr8	144850825	144853003	chr8:144850825-144853003	0	-	144850825	144851338	789624	2	570,278,	0,1900,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	144876496	144901479	chr8:144876496-144901479	0	-	144880435	144890349	789624	6	165,94,114,127,96,81,	0,3868,13084,13436,13811,24902,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	144876535	144901465	chr8:144876535-144901465	0	-	144880435	144890349	789624	7	126,94,63,114,127,96,67,	0,3829,10304,13045,13397,13772,24863,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	144876535	144901465	chr8:144876535-144901465	0	-	144880435	144890349	789624	7	126,94,63,114,142,96,67,	0,3829,10304,13045,13397,13772,24863,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	144876950	144901461	chr8:144876950-144901461	3	-	144881514	144890349	789624	6	5886,63,114,142,96,63,	0,9889,12630,12982,13357,24448,
#Partially deleted in new
chr8	144881138	144901431	chr8:144881138-144901431	1	-	144881514	144890349	789624	6	1698,63,114,127,96,33,	0,5701,8442,8794,9169,20260,
#Partially deleted in new
chr8	144882605	144901423	chr8:144882605-144901423	0	-	144882605	144890349	789624	5	231,114,127,96,25,	0,6975,7327,7702,18793,
#Partially deleted in new
chr8	144882654	144901426	chr8:144882654-144901426	0	-	144882654	144890349	789624	6	182,63,114,127,96,90,	0,4185,6926,7278,7653,18682,
#Partially deleted in new
chr8	144882759	144901423	chr8:144882759-144901423	0	-	144882759	144890349	789624	7	77,63,114,127,96,90,25,	0,4080,6821,7173,7548,12383,18639,
#Partially deleted in new
chr8	144889686	144901453	chr8:144889686-144901453	0	-	144889686	144889686	8553170	3	373,96,55,	0,621,11712,
#Partially deleted in new
chr8	144889965	144902168	chr8:144889965-144902168	0	-	144889965	144890349	789624	3	94,96,420,	0,342,11783,
#Partially deleted in new
chr8	144930357	144950888	chr8:144930357-144950888	3	-	144930737	144946206	789624	4	2233,205,86,92,	0,15653,17582,20439,
#Partially deleted in new
chr8	144930359	144950888	chr8:144930359-144950888	1	-	144930737	144946206	789624	3	2231,205,92,	0,15651,20437,
#Partially deleted in new
chr8	144930384	144950888	chr8:144930384-144950888	1	-	144930737	144946206	789624	3	2206,205,92,	0,15626,20412,
#Partially deleted in new
chr8	144932122	144950819	chr8:144932122-144950819	0	-	144932122	144946206	789624	3	468,205,23,	0,13888,18674,
#Partially deleted in new
chr8	144932143	144948035	chr8:144932143-144948035	0	-	144932143	144932143	8553170	3	447,205,79,	0,13867,15813,
#Partially deleted in new
chr8	144932404	144950875	chr8:144932404-144950875	0	-	144932404	144932404	8553170	3	186,303,79,	0,13508,18392,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	144932414	144950595	chr8:144932414-144950595	0	-	144932414	144946206	789624	3	176,205,194,	0,13596,17987,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	144944088	144950875	chr8:144944088-144950875	0	-	144944088	144944088	8553170	2	2127,79,	0,6708,
#Deleted in new
chr8	144945923	144948530	chr8:144945923-144948530	0	-	144945923	144945923	8553170	2	292,574,	0,2033,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	144973588	145002894	chr8:144973588-145002894	7	-	144973588	144973588	16724991	3	4965,167,78,	0,26014,29228,
#Partially deleted in new
chr8	144976189	144999723	chr8:144976189-144999723	5	-	144976189	144976189	16724991	2	2364,121,	0,23413,
#Partially deleted in new
chr8	144976684	144996162	chr8:144976684-144996162	4	-	144976684	144976684	16724991	2	1869,1684,	0,17794,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	144978138	145002895	chr8:144978138-145002895	5	-	144978138	144978138	16724991	5	415,114,101,167,79,	0,16340,18368,21464,24678,
#Partially deleted in new
chr8	144978314	145002895	chr8:144978314-145002895	5	-	144978314	144978314	16724991	4	239,114,167,79,	0,16164,21288,24502,
#Partially deleted in new
chr8	144992913	144994837	chr8:144992913-144994837	3	+	144992913	144992913	8553170	2	100,339,	0,1585,
#Deleted in new
chr8	144994885	144995540	chr8:144994885-144995540	7	+	144994885	144994885	16724991	1	655,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr8	144995721	145002875	chr8:144995721-145002875	4	-	144995721	144995721	16724991	3	886,167,59,	0,3881,7095,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	144996451	145002881	chr8:144996451-145002881	4	-	144996451	144996451	16724991	4	156,167,187,65,	0,3151,3900,6365,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr8	144997981	145002850	chr8:144997981-145002850	4	-	144997981	144997981	16724991	2	1788,34,	0,4835,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr8	145002810	145006046	chr8:145002810-145006046	3	+	145002810	145002810	789624	1	3236,	0,
#Deleted in new
chr8	145005560	145005906	chr8:145005560-145005906	7	-	145005560	145005560	16724991	1	346,	0,
#Deleted in new
chr8	145047859	145048889	chr8:145047859-145048889	7	+	145047859	145047859	16724991	1	1030,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr8	145052377	145056030	chr8:145052377-145056030	3	+	145052491	145054157	789624	5	120,312,85,147,2013,	0,208,684,919,1640,
#Deleted in new
chr8	145052464	145054438	chr8:145052464-145054438	0	+	145052464	145052464	8553170	4	472,85,147,421,	0,597,832,1553,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr8	145052466	145056030	chr8:145052466-145056030	0	+	145052466	145052466	8553170	4	431,85,147,2013,	0,595,830,1551,
#Deleted in new
chr8	145052466	145054194	chr8:145052466-145054194	0	+	145052466	145052466	8553170	2	431,898,	0,830,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	145052466	145066624	chr8:145052466-145066624	1	+	145052491	145061264	8553170	7	31,312,85,147,124,84,910,	0,119,595,830,1551,8761,13248,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	145052466	145066679	chr8:145052466-145066679	1	+	145052491	145061264	8553170	7	31,312,85,147,124,54,972,	0,119,595,830,1551,8791,13241,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr8	145052466	145066516	chr8:145052466-145066516	1	+	145052491	145065780	8553170	6	31,312,85,147,124,809,	0,119,595,830,1551,13241,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr8	145052466	145066685	chr8:145052466-145066685	1	+	145052491	145061264	8553170	7	31,312,85,147,124,84,978,	0,119,595,830,1551,8761,13241,
#Deleted in new
chr8	145052467	145053437	chr8:145052467-145053437	0	+	145052467	145052467	8553170	4	118,151,85,141,	0,279,594,829,
#Deleted in new
chr8_KI270810v1_alt	4305	6404	chr8_KI270810v1_alt:4305-6404	1	-	4305	4305	789624	3	549,309,57,	0,1212,2042,
#Deleted in new
chr8_KI270810v1_alt	4991	6404	chr8_KI270810v1_alt:4991-6404	0	-	4991	4991	8553170	2	835,57,	0,1356,
#Deleted in new
chr8_KI270810v1_alt	6283	9957	chr8_KI270810v1_alt:6283-9957	3	-	6283	6283	8553170	2	121,451,	0,3223,
#Deleted in new
chr8_KI270810v1_alt	6347	6404	chr8_KI270810v1_alt:6347-6404	1	-	6347	6347	8553170	1	57,	0,
#Deleted in new
chr8_KI270810v1_alt	353447	369558	chr8_KI270810v1_alt:353447-369558	3	-	353447	353447	8553170	5	361,115,124,105,61,	0,12029,14106,15471,16050,
#Deleted in new
chr8_KI270811v1_alt	15249	21823	chr8_KI270811v1_alt:15249-21823	3	-	15249	15249	789624	3	170,196,2683,	0,999,3891,
#Deleted in new
chr8_KI270811v1_alt	87863	89049	chr8_KI270811v1_alt:87863-89049	3	-	87863	87863	8553170	1	1186,	0,
#Deleted in new
chr8_KI270811v1_alt	92900	100278	chr8_KI270811v1_alt:92900-100278	3	+	92900	92900	8553170	2	108,329,	0,7049,
#Deleted in new
chr8_KI270811v1_alt	96748	99189	chr8_KI270811v1_alt:96748-99189	3	+	96748	96748	8553170	3	233,112,135,	0,1732,2306,
#Deleted in new
chr8_KI270811v1_alt	206897	271426	chr8_KI270811v1_alt:206897-271426	3	+	254225	271426	789624	3	66,1058,212,	0,47260,64317,
#Deleted in new
chr8_KI270811v1_alt	254175	271426	chr8_KI270811v1_alt:254175-271426	0	+	254225	271426	789624	2	1040,212,	0,17039,
#Deleted in new
chr8_KI270811v1_alt	271040	271270	chr8_KI270811v1_alt:271040-271270	3	-	271040	271040	8553170	1	230,	0,
#Deleted in new
chr8_KI270812v1_alt	21556	174221	chr8_KI270812v1_alt:21556-174221	1	+	21556	21556	8553170	4	151,55,1192,346,	0,24714,121846,152319,
#Deleted in new
chr8_KI270812v1_alt	21686	246356	chr8_KI270812v1_alt:21686-246356	1	+	21686	21686	8553170	3	21,55,184,	0,24584,224486,
#Deleted in new
chr8_KI270812v1_alt	46270	279067	chr8_KI270812v1_alt:46270-279067	3	+	46270	46270	8553170	2	55,479,	0,232318,
#Deleted in new
chr8_KI270812v1_alt	46270	48934	chr8_KI270812v1_alt:46270-48934	0	+	46270	46270	8553170	2	55,190,	0,2474,
#Deleted in new
chr8_KI270812v1_alt	160046	160994	chr8_KI270812v1_alt:160046-160994	3	+	160046	160046	8553170	1	948,	0,
#Deleted in new
chr8_KI270812v1_alt	246171	246356	chr8_KI270812v1_alt:246171-246356	3	+	246171	246171	8553170	1	185,	0,
#Deleted in new
chr8_KI270813v1_alt	9694	39621	chr8_KI270813v1_alt:9694-39621	3	-	9694	9694	8553170	6	1301,262,84,279,174,531,	0,4564,6284,6599,23544,29396,
#Deleted in new
chr8_KI270813v1_alt	24048	25641	chr8_KI270813v1_alt:24048-25641	7	+	24048	24048	16724991	1	1593,	0,
#Deleted in new
chr8_KI270813v1_alt	26104	27285	chr8_KI270813v1_alt:26104-27285	7	+	26104	26104	16724991	1	1181,	0,
#Deleted in new
chr8_KI270813v1_alt	39795	68296	chr8_KI270813v1_alt:39795-68296	3	-	42257	47226	789624	7	3047,83,96,127,83,150,61,	0,4106,4725,5598,7419,24396,28440,
#Deleted in new
chr8_KI270813v1_alt	55849	60219	chr8_KI270813v1_alt:55849-60219	7	+	55849	55849	16724991	2	88,164,	0,4206,
#Deleted in new
chr8_KI270813v1_alt	97912	99936	chr8_KI270813v1_alt:97912-99936	3	-	98013	99900	0	2	238,94,	0,1930,
#Deleted in new
chr8_KI270813v1_alt	102062	103618	chr8_KI270813v1_alt:102062-103618	7	+	102062	102062	16724991	1	1556,	0,
#Deleted in new
chr8_KI270813v1_alt	111958	113419	chr8_KI270813v1_alt:111958-113419	3	-	112054	113201	0	2	242,276,	0,1185,
#Deleted in new
chr8_KI270813v1_alt	125757	145969	chr8_KI270813v1_alt:125757-145969	0	-	125948	145969	789624	3	66,179,153,	0,170,20059,
#Deleted in new
chr8_KI270813v1_alt	130825	146636	chr8_KI270813v1_alt:130825-146636	1	-	131087	146613	789624	4	297,78,153,84,	0,3098,14991,15727,
#Deleted in new
chr8_KI270813v1_alt	130825	146636	chr8_KI270813v1_alt:130825-146636	1	-	131087	146613	789624	3	297,153,84,	0,14991,15727,
#Deleted in new
chr8_KI270813v1_alt	130825	145967	chr8_KI270813v1_alt:130825-145967	0	-	132326	145967	789624	3	297,104,151,	0,1408,14991,
#Deleted in new
chr8_KI270813v1_alt	133663	146780	chr8_KI270813v1_alt:133663-146780	1	-	133979	146613	789624	4	338,76,153,228,	0,561,12153,12889,
#Deleted in new
chr8_KI270813v1_alt	133664	135468	chr8_KI270813v1_alt:133664-135468	3	-	133813	135416	789624	2	337,107,	0,1697,
#Deleted in new
chr8_KI270813v1_alt	133703	135468	chr8_KI270813v1_alt:133703-135468	1	-	133979	135416	789624	3	298,76,107,	0,521,1658,
#Deleted in new
chr8_KI270813v1_alt	133711	146764	chr8_KI270813v1_alt:133711-146764	1	-	133813	146613	789624	3	290,153,212,	0,12105,12841,
#Deleted in new
chr8_KI270813v1_alt	144223	146784	chr8_KI270813v1_alt:144223-146784	1	-	144516	146613	789624	3	421,153,232,	0,1593,2329,
#Deleted in new
chr8_KI270813v1_alt	153416	158192	chr8_KI270813v1_alt:153416-158192	3	-	153464	158178	0	2	209,72,	0,4704,
#Deleted in new
chr8_KI270813v1_alt	165610	169505	chr8_KI270813v1_alt:165610-169505	3	-	165710	169487	0	2	249,67,	0,3828,
#Deleted in new
chr8_KI270813v1_alt	170773	172696	chr8_KI270813v1_alt:170773-172696	3	+	170825	172654	789624	3	122,42,167,	0,466,1756,
#Deleted in new
chr8_KI270813v1_alt	178948	192414	chr8_KI270813v1_alt:178948-192414	3	+	179036	192326	789624	2	158,231,	0,13235,
#Deleted in new
chr8_KI270813v1_alt	222730	225553	chr8_KI270813v1_alt:222730-225553	3	+	222907	224983	789624	4	254,62,68,1203,	0,1017,1324,1620,
#Deleted in new
chr8_KI270813v1_alt	232155	235165	chr8_KI270813v1_alt:232155-235165	7	-	232155	232155	16724991	4	962,109,200,123,	0,1627,2193,2887,
#Deleted in new
chr8_KI270813v1_alt	239802	242815	chr8_KI270813v1_alt:239802-242815	7	-	239802	239802	16724991	4	963,109,200,123,	0,1628,2195,2890,
#Deleted in new
chr8_KI270813v1_alt	247452	250463	chr8_KI270813v1_alt:247452-250463	7	-	247452	247452	16724991	4	963,109,201,123,	0,1628,2193,2888,
#Deleted in new
chr8_KI270813v1_alt	255097	258109	chr8_KI270813v1_alt:255097-258109	7	-	255097	255097	16724991	4	963,109,200,123,	0,1627,2194,2889,
#Deleted in new
chr8_KI270813v1_alt	262746	265756	chr8_KI270813v1_alt:262746-265756	7	-	262746	262746	16724991	4	963,109,200,123,	0,1627,2194,2887,
#Deleted in new
chr8_KI270813v1_alt	275108	276019	chr8_KI270813v1_alt:275108-276019	7	+	275108	275108	16724991	1	911,	0,
#Deleted in new
chr8_KI270813v1_alt	284106	284370	chr8_KI270813v1_alt:284106-284370	7	+	284106	284106	16724991	1	264,	0,
#Deleted in new
chr8_KI270814v1_alt	20239	35282	chr8_KI270814v1_alt:20239-35282	3	+	20239	20239	8553170	4	100,127,196,134,	0,295,14419,14909,
#Deleted in new
chr8_KI270814v1_alt	20243	29818	chr8_KI270814v1_alt:20243-29818	0	+	20243	20243	8553170	3	96,127,250,	0,291,9325,
#Deleted in new
chr8_KI270814v1_alt	20269	78708	chr8_KI270814v1_alt:20269-78708	0	+	20269	20269	8553170	5	97,127,102,184,200,	0,265,40739,47689,58239,
#Deleted in new
chr8_KI270814v1_alt	20534	27738	chr8_KI270814v1_alt:20534-27738	0	+	20534	20534	8553170	2	127,72,	0,7132,
#Deleted in new
chr8_KI270814v1_alt	20534	57856	chr8_KI270814v1_alt:20534-57856	0	+	20534	20534	8553170	2	127,33,	0,37289,
#Deleted in new
chr8_KI270814v1_alt	56689	57981	chr8_KI270814v1_alt:56689-57981	1	+	56689	56689	8553170	4	77,93,83,158,	0,327,780,1134,
#Deleted in new
chr8_KI270814v1_alt	56947	58650	chr8_KI270814v1_alt:56947-58650	0	+	56947	56947	8553170	3	162,114,126,	0,876,1577,
#Deleted in new
chr8_KI270814v1_alt	57502	71043	chr8_KI270814v1_alt:57502-71043	1	+	57502	57502	789624	8	50,214,185,209,103,102,184,1238,	0,321,1022,2310,3080,3506,10456,12303,
#Deleted in new
chr8_KI270814v1_alt	57792	59152	chr8_KI270814v1_alt:57792-59152	0	+	57792	57792	8553170	3	245,185,150,	0,732,1210,
#Deleted in new
chr8_KI270814v1_alt	78470	78955	chr8_KI270814v1_alt:78470-78955	7	+	78470	78470	16724991	2	168,156,	0,329,
#Deleted in new
chr8_KI270814v1_alt	99639	105027	chr8_KI270814v1_alt:99639-105027	3	+	99639	99639	789624	3	114,1584,1273,	0,308,4115,
#Deleted in new
chr8_KI270814v1_alt	117956	123145	chr8_KI270814v1_alt:117956-123145	3	+	117956	117956	5263520	4	1222,244,115,294,	0,2428,4618,4895,
#Deleted in new
chr8_KI270814v1_alt	127965	128063	chr8_KI270814v1_alt:127965-128063	3	+	127965	127965	8553170	1	98,	0,
#Deleted in new
chr8_KI270815v1_alt	73096	73668	chr8_KI270815v1_alt:73096-73668	3	-	73096	73096	8553170	1	572,	0,
#Deleted in new
chr8_KI270815v1_alt	74835	81689	chr8_KI270815v1_alt:74835-81689	5	+	74835	74835	16724991	2	126,297,	0,6557,
#Deleted in new
chr8_KI270815v1_alt	75141	81818	chr8_KI270815v1_alt:75141-81818	4	+	75141	75141	16724991	3	70,90,426,	0,5294,6251,
#Deleted in new
chr8_KI270815v1_alt	75141	82015	chr8_KI270815v1_alt:75141-82015	4	+	75141	75141	16724991	2	70,623,	0,6251,
#Deleted in new
chr8_KI270815v1_alt	80016	83000	chr8_KI270815v1_alt:80016-83000	7	+	80016	80016	16724991	3	172,288,64,	0,2160,2920,
#Deleted in new
chr8_KI270815v1_alt	80112	81640	chr8_KI270815v1_alt:80112-81640	4	+	80112	80112	16724991	2	413,248,	0,1280,
#Deleted in new
chr8_KI270815v1_alt	95389	129969	chr8_KI270815v1_alt:95389-129969	0	-	95389	95389	8553170	3	116,117,82,	0,33298,34498,
#Deleted in new
chr8_KI270815v1_alt	95391	130088	chr8_KI270815v1_alt:95391-130088	3	-	96126	129211	789624	5	2474,114,130,108,201,	0,32774,33283,33787,34496,
#Deleted in new
chr8_KI270815v1_alt	110274	132244	chr8_KI270815v1_alt:110274-132244	3	+	110274	110274	8553170	4	92,87,309,57,	0,14112,21514,21913,
#Deleted in new
chr8_KI270815v1_alt	126432	130900	chr8_KI270815v1_alt:126432-130900	0	-	126432	126432	8553170	3	179,114,2226,	0,1733,2242,
#Deleted in new
chr8_KI270815v1_alt	127938	129924	chr8_KI270815v1_alt:127938-129924	0	-	128112	129924	789624	4	341,130,108,37,	0,736,1240,1949,
#Deleted in new
chr8_KI270816v1_alt	26296	31493	chr8_KI270816v1_alt:26296-31493	3	-	26296	31461	789624	3	197,1318,78,	0,1746,5119,
#Deleted in new
chr8_KI270816v1_alt	32149	32438	chr8_KI270816v1_alt:32149-32438	3	+	32149	32149	8553170	1	289,	0,
#Deleted in new
chr8_KI270816v1_alt	32149	32440	chr8_KI270816v1_alt:32149-32440	3	+	32149	32149	8553170	1	291,	0,
#Deleted in new
chr8_KI270816v1_alt	43246	53102	chr8_KI270816v1_alt:43246-53102	3	+	49375	52944	0	14	554,138,97,90,221,193,169,103,54,87,173,142,74,401,	0,1852,2727,5155,6125,6570,7396,7795,8163,8535,8752,9002,9241,9455,
#Deleted in new
chr8_KI270816v1_alt	43746	49519	chr8_KI270816v1_alt:43746-49519	0	+	49375	49519	789624	5	54,138,97,74,148,	0,1352,2227,4671,5625,
#Deleted in new
chr8_KI270816v1_alt	47925	50726	chr8_KI270816v1_alt:47925-50726	0	+	49375	50726	789624	5	136,90,221,193,84,	0,476,1446,1891,2717,
#Deleted in new
chr8_KI270816v1_alt	47952	53102	chr8_KI270816v1_alt:47952-53102	1	+	47995	52944	789624	12	109,74,221,193,169,103,54,87,173,142,74,401,	0,465,1419,1864,2690,3089,3457,3829,4046,4296,4535,4749,
#Deleted in new
chr8_KI270816v1_alt	48346	53102	chr8_KI270816v1_alt:48346-53102	1	+	49375	52944	0	11	145,221,193,169,103,54,87,173,142,74,401,	0,1025,1470,2296,2695,3063,3435,3652,3902,4141,4355,
#Deleted in new
chr8_KI270816v1_alt	48377	53095	chr8_KI270816v1_alt:48377-53095	0	+	48377	48377	8553170	9	114,638,169,422,87,173,142,74,394,	0,994,2265,2664,3404,3621,3871,4110,4324,
#Deleted in new
chr8_KI270816v1_alt	48393	49942	chr8_KI270816v1_alt:48393-49942	0	+	49375	49942	789624	3	98,218,126,	0,981,1423,
#Deleted in new
chr8_KI270816v1_alt	48410	51828	chr8_KI270816v1_alt:48410-51828	0	+	48910	51828	789624	8	81,233,221,193,169,103,54,47,	0,311,961,1406,2232,2631,2999,3371,
#Deleted in new
chr8_KI270816v1_alt	48597	50693	chr8_KI270816v1_alt:48597-50693	0	+	49375	50693	789624	4	111,221,193,51,	0,774,1219,2045,
#Deleted in new
chr8_KI270816v1_alt	48728	53099	chr8_KI270816v1_alt:48728-53099	0	+	48728	48728	8553170	6	864,1647,87,392,74,398,	0,1088,3053,3270,3759,3973,
#Deleted in new
chr8_KI270816v1_alt	50079	53099	chr8_KI270816v1_alt:50079-53099	0	+	50079	50079	8553170	5	732,103,54,780,398,	0,962,1330,1702,2622,
#Deleted in new
chr8_KI270816v1_alt	50667	53072	chr8_KI270816v1_alt:50667-53072	0	+	50667	50667	8553170	6	796,87,173,142,74,371,	0,1114,1331,1581,1820,2034,
#Deleted in new
chr8_KI270816v1_alt	50900	51918	chr8_KI270816v1_alt:50900-51918	0	+	50900	50900	8553170	2	563,137,	0,881,
#Deleted in new
chr8_KI270816v1_alt	51397	52402	chr8_KI270816v1_alt:51397-52402	0	+	51397	51397	8553170	4	66,87,173,154,	0,384,601,851,
#Deleted in new
chr8_KI270816v1_alt	51769	53067	chr8_KI270816v1_alt:51769-53067	0	+	51769	51769	8553170	5	99,173,142,74,366,	0,229,479,718,932,
#Deleted in new
chr8_KI270816v1_alt	52089	53102	chr8_KI270816v1_alt:52089-53102	0	+	52089	53102	789624	4	82,142,74,393,	0,159,398,620,
#Deleted in new
chr8_KI270816v1_alt	56226	63011	chr8_KI270816v1_alt:56226-63011	3	-	57278	62754	789624	14	1279,66,103,120,168,174,144,115,138,185,118,155,153,551,	0,1424,1599,1955,2365,3254,3510,3764,4056,4286,4690,5480,5846,6234,
#Deleted in new
chr8_KI270816v1_alt	56231	59790	chr8_KI270816v1_alt:56231-59790	0	-	56231	56231	8553170	5	1274,66,103,168,310,	0,1419,1594,2360,3249,
#Deleted in new
chr8_KI270816v1_alt	56231	58797	chr8_KI270816v1_alt:56231-58797	0	-	56231	56231	8553170	3	1274,66,972,	0,1419,1594,
#Deleted in new
chr8_KI270816v1_alt	56234	57926	chr8_KI270816v1_alt:56234-57926	0	-	56234	56234	8553170	2	323,101,	0,1591,
#Deleted in new
chr8_KI270816v1_alt	56237	58894	chr8_KI270816v1_alt:56237-58894	0	-	56237	56237	8553170	4	1268,103,120,303,	0,1588,1944,2354,
#Deleted in new
chr8_KI270816v1_alt	56250	57151	chr8_KI270816v1_alt:56250-57151	0	-	56250	56250	8553170	2	307,495,	0,406,
#Deleted in new
chr8_KI270816v1_alt	56341	58927	chr8_KI270816v1_alt:56341-58927	0	-	56341	56341	8553170	5	1164,66,103,120,336,	0,1309,1484,1840,2250,
#Deleted in new
chr8_KI270816v1_alt	57408	58883	chr8_KI270816v1_alt:57408-58883	0	-	57408	57408	8553170	3	97,278,292,	0,242,1183,
#Deleted in new
chr8_KI270816v1_alt	57411	58900	chr8_KI270816v1_alt:57411-58900	0	-	57411	57411	8553170	4	94,66,103,309,	0,239,414,1180,
#Deleted in new
chr8_KI270816v1_alt	58192	58705	chr8_KI270816v1_alt:58192-58705	0	-	58192	58192	8553170	2	109,196,	0,317,
#Deleted in new
chr8_KI270816v1_alt	58626	62788	chr8_KI270816v1_alt:58626-62788	0	-	58626	62754	789624	10	133,174,144,115,175,185,118,155,153,328,	0,854,1110,1364,1656,1886,2290,3080,3446,3834,
#Deleted in new
chr8_KI270816v1_alt	63529	67437	chr8_KI270816v1_alt:63529-67437	3	+	63529	63529	8553170	5	77,108,144,107,737,	0,308,1162,1510,3171,
#Deleted in new
chr8_KI270816v1_alt	64824	65363	chr8_KI270816v1_alt:64824-65363	0	-	64824	64824	8553170	2	116,338,	0,201,
#Deleted in new
chr8_KI270816v1_alt	64824	66202	chr8_KI270816v1_alt:64824-66202	0	-	64824	66202	789624	5	309,116,103,81,85,	0,445,638,837,1293,
#Deleted in new
chr8_KI270816v1_alt	64825	68391	chr8_KI270816v1_alt:64825-68391	3	-	64877	68358	0	13	115,108,155,103,81,85,141,197,116,131,83,128,259,	0,200,405,637,836,1292,1646,1860,2276,2483,2871,3030,3307,
#Deleted in new
chr8_KI270816v1_alt	64825	65455	chr8_KI270816v1_alt:64825-65455	0	-	64825	64825	8553170	3	115,108,225,	0,200,405,
#Deleted in new
chr8_KI270816v1_alt	64826	66841	chr8_KI270816v1_alt:64826-66841	0	-	64826	64826	8553170	7	114,108,155,103,81,495,156,	0,199,404,636,835,1291,1859,
#Deleted in new
chr8_KI270816v1_alt	64826	68379	chr8_KI270816v1_alt:64826-68379	1	-	64877	68358	0	13	114,108,116,103,81,85,141,197,116,131,83,128,247,	0,199,443,636,835,1291,1645,1859,2275,2482,2870,3029,3306,
#Deleted in new
chr8_KI270816v1_alt	64826	68379	chr8_KI270816v1_alt:64826-68379	0	-	64826	68358	789624	12	307,155,103,81,85,141,197,116,131,83,128,247,	0,404,636,835,1291,1645,1859,2275,2482,2870,3029,3306,
#Deleted in new
chr8_KI270816v1_alt	65471	68258	chr8_KI270816v1_alt:65471-68258	0	-	66859	68258	789624	9	94,81,85,141,197,131,83,128,126,	0,190,646,1000,1214,1837,2225,2384,2661,
#Deleted in new
chr8_KI270816v1_alt	65639	67955	chr8_KI270816v1_alt:65639-67955	0	-	65639	65639	8553170	7	103,85,141,197,116,131,259,	0,478,832,1046,1462,1669,2057,
#Deleted in new
chr8_KI270816v1_alt	65662	68198	chr8_KI270816v1_alt:65662-68198	0	-	66859	68198	789624	8	80,85,141,197,131,83,83,66,	0,455,809,1023,1646,2034,2238,2470,
#Deleted in new
chr8_KI270816v1_alt	66479	68233	chr8_KI270816v1_alt:66479-68233	0	-	66479	66479	8553170	5	133,754,83,128,101,	0,206,1217,1376,1653,
#Deleted in new
chr8_KI270816v1_alt	66982	68689	chr8_KI270816v1_alt:66982-68689	0	-	66982	66982	8553170	5	235,131,83,128,64,	0,326,714,873,1643,
#Deleted in new
chr8_KI270816v1_alt	67306	68361	chr8_KI270816v1_alt:67306-68361	0	-	67306	67306	8553170	3	133,83,506,	0,390,549,
#Deleted in new
chr8_KI270816v1_alt	68397	73345	chr8_KI270816v1_alt:68397-73345	0	+	68397	68397	8553170	1	4948,	0,
#Deleted in new
chr8_KI270816v1_alt	69675	70710	chr8_KI270816v1_alt:69675-70710	3	+	69675	69675	8553170	2	268,163,	0,872,
#Deleted in new
chr8_KI270816v1_alt	69736	87715	chr8_KI270816v1_alt:69736-87715	1	-	69831	76885	0	9	134,195,222,101,100,72,121,179,328,	0,315,809,1357,1532,6522,7032,14196,17651,
#Deleted in new
chr8_KI270816v1_alt	69736	87428	chr8_KI270816v1_alt:69736-87428	1	-	69831	76885	0	8	134,195,222,101,100,72,124,510,	0,315,809,1357,1532,6522,7032,17182,
#Deleted in new
chr8_KI270816v1_alt	69736	87715	chr8_KI270816v1_alt:69736-87715	1	-	69831	80121	0	9	134,195,222,101,100,72,124,1102,328,	0,315,809,1357,1532,6522,7032,9294,17651,
#Deleted in new
chr8_KI270816v1_alt	69761	87436	chr8_KI270816v1_alt:69761-87436	1	-	69824	76885	789624	4	109,162,99,49,	0,290,7032,17626,
#Deleted in new
chr8_KI270816v1_alt	69767	87719	chr8_KI270816v1_alt:69767-87719	1	-	69831	76885	0	8	103,195,222,101,100,72,124,332,	0,284,778,1326,1501,6491,7001,17620,
#Deleted in new
chr8_KI270816v1_alt	69767	87455	chr8_KI270816v1_alt:69767-87455	1	-	69831	80121	0	10	103,195,222,101,100,72,124,1091,131,68,	0,284,778,1326,1501,6491,7001,9263,10880,17620,
#Deleted in new
chr8_KI270816v1_alt	69767	87453	chr8_KI270816v1_alt:69767-87453	3	-	69831	76885	0	8	103,195,222,101,43,72,124,66,	0,284,778,1326,1558,6491,7001,17620,
#Deleted in new
chr8_KI270816v1_alt	69767	87784	chr8_KI270816v1_alt:69767-87784	1	-	69831	76885	0	8	103,195,222,101,100,72,121,397,	0,284,778,1326,1501,6491,7001,17620,
#Deleted in new
chr8_KI270816v1_alt	69767	87465	chr8_KI270816v1_alt:69767-87465	1	-	69831	76885	0	7	103,195,222,101,100,124,78,	0,284,778,1326,1501,7001,17620,
#Deleted in new
chr8_KI270816v1_alt	69767	74291	chr8_KI270816v1_alt:69767-74291	0	-	69767	69767	8553170	4	103,195,222,3198,	0,284,778,1326,
#Deleted in new
chr8_KI270816v1_alt	69768	87440	chr8_KI270816v1_alt:69768-87440	1	-	69831	76885	789624	7	102,195,222,101,43,124,53,	0,283,777,1325,1557,7000,17619,
#Deleted in new
chr8_KI270816v1_alt	69775	87455	chr8_KI270816v1_alt:69775-87455	1	-	69831	76885	0	8	95,195,222,101,100,124,179,68,	0,276,770,1318,1493,6993,12979,17612,
#Deleted in new
chr8_KI270816v1_alt	70058	87715	chr8_KI270816v1_alt:70058-87715	1	-	70058	80121	789624	10	54,132,222,101,100,72,124,1091,14,328,	0,56,487,1035,1210,6200,6710,8972,12628,17329,
#Deleted in new
chr8_KI270816v1_alt	70073	87402	chr8_KI270816v1_alt:70073-87402	0	-	70073	76885	789624	8	173,222,101,100,72,121,197,15,	0,472,1020,1195,6185,6695,13841,17314,
#Deleted in new
chr8_KI270816v1_alt	70225	87439	chr8_KI270816v1_alt:70225-87439	0	-	70225	76885	789624	6	21,222,101,100,121,52,	0,320,868,1043,6543,17162,
#Deleted in new
chr8_KI270816v1_alt	70428	87428	chr8_KI270816v1_alt:70428-87428	0	-	70428	70428	8553170	6	339,101,100,72,124,510,	0,665,840,5830,6340,16490,
#Deleted in new
chr8_KI270816v1_alt	70545	87434	chr8_KI270816v1_alt:70545-87434	0	-	70545	76885	789624	7	222,101,100,72,121,179,47,	0,548,723,5713,6223,13387,16842,
#Deleted in new
chr8_KI270816v1_alt	70545	87442	chr8_KI270816v1_alt:70545-87442	0	-	70545	76885	789624	7	222,101,100,72,124,179,55,	0,548,723,5713,6223,13387,16842,
#Deleted in new
chr8_KI270816v1_alt	70561	87420	chr8_KI270816v1_alt:70561-87420	0	-	70561	76885	789624	7	206,101,100,72,124,151,33,	0,532,707,5697,6207,12125,16826,
#Deleted in new
chr8_KI270816v1_alt	70603	87440	chr8_KI270816v1_alt:70603-87440	0	-	70603	70603	8553170	5	164,275,72,124,53,	0,490,5655,6165,16784,
#Deleted in new
chr8_KI270816v1_alt	70652	87417	chr8_KI270816v1_alt:70652-87417	0	-	70652	76885	789624	7	115,101,100,72,124,228,30,	0,441,616,5606,6116,12102,16735,
#Deleted in new
chr8_KI270816v1_alt	70659	77604	chr8_KI270816v1_alt:70659-77604	0	-	70659	76885	789624	5	108,101,100,72,836,	0,434,609,5599,6109,
#Deleted in new
chr8_KI270816v1_alt	70681	87437	chr8_KI270816v1_alt:70681-87437	0	-	70681	76885	789624	6	86,101,43,72,121,50,	0,412,644,5577,6087,16706,
#Deleted in new
chr8_KI270816v1_alt	70702	87424	chr8_KI270816v1_alt:70702-87424	0	-	70702	70702	8553170	6	65,101,421,72,121,37,	0,391,623,5556,6066,16685,
#Deleted in new
chr8_KI270816v1_alt	76071	87421	chr8_KI270816v1_alt:76071-87421	0	-	76071	76071	8553170	3	259,121,527,	0,697,10823,
#Deleted in new
chr8_KI270816v1_alt	76258	87433	chr8_KI270816v1_alt:76258-87433	0	-	76258	76885	789624	6	72,124,228,197,103,46,	0,510,6496,7656,8197,11129,
#Deleted in new
chr8_KI270816v1_alt	76768	86794	chr8_KI270816v1_alt:76768-86794	0	-	76768	76885	789624	2	124,667,	0,9359,
#Deleted in new
chr8_KI270816v1_alt	76768	79356	chr8_KI270816v1_alt:76768-79356	0	-	79026	79356	789624	2	121,489,	0,2099,
#Deleted in new
chr8_KI270816v1_alt	76779	87453	chr8_KI270816v1_alt:76779-87453	0	-	76779	76885	789624	2	113,501,	0,10173,
#Deleted in new
chr8_KI270816v1_alt	79220	87482	chr8_KI270816v1_alt:79220-87482	0	-	79220	80121	789624	2	901,95,	0,8167,
#Deleted in new
chr8_KI270816v1_alt	79350	86169	chr8_KI270816v1_alt:79350-86169	0	-	79350	80121	789624	2	771,42,	0,6777,
#Deleted in new
chr8_KI270816v1_alt	79550	87455	chr8_KI270816v1_alt:79550-87455	0	-	79550	80121	789624	3	571,122,68,	0,1097,7837,
#Deleted in new
chr8_KI270816v1_alt	79579	80933	chr8_KI270816v1_alt:79579-80933	0	-	79579	80121	789624	2	542,286,	0,1068,
#Deleted in new
chr8_KI270816v1_alt	79584	86385	chr8_KI270816v1_alt:79584-86385	0	-	79584	80121	789624	3	537,131,258,	0,1063,6543,
#Deleted in new
chr8_KI270816v1_alt	79649	82209	chr8_KI270816v1_alt:79649-82209	0	-	79649	80121	789624	2	472,81,	0,2479,
#Deleted in new
chr8_KI270816v1_alt	79683	87455	chr8_KI270816v1_alt:79683-87455	0	-	79683	80121	789624	3	438,94,68,	0,1001,7704,
#Deleted in new
chr8_KI270816v1_alt	79734	87455	chr8_KI270816v1_alt:79734-87455	0	-	79734	80121	789624	3	387,128,68,	0,913,7653,
#Deleted in new
chr8_KI270816v1_alt	79869	87455	chr8_KI270816v1_alt:79869-87455	0	-	79869	80121	789624	3	252,296,68,	0,2817,7518,
#Deleted in new
chr8_KI270816v1_alt	79877	87455	chr8_KI270816v1_alt:79877-87455	0	-	79877	80121	789624	3	244,247,68,	0,2809,7510,
#Deleted in new
chr8_KI270816v1_alt	79916	87455	chr8_KI270816v1_alt:79916-87455	0	-	79916	80121	789624	4	205,131,151,68,	0,731,2770,7471,
#Deleted in new
chr8_KI270816v1_alt	79933	87451	chr8_KI270816v1_alt:79933-87451	0	-	79933	80121	789624	3	188,91,64,	0,751,7454,
#Deleted in new
chr8_KI270816v1_alt	79961	87425	chr8_KI270816v1_alt:79961-87425	0	-	79961	80121	789624	4	160,128,247,38,	0,686,2725,7426,
#Deleted in new
chr8_KI270816v1_alt	79973	87145	chr8_KI270816v1_alt:79973-87145	0	-	79973	80121	789624	3	148,131,227,	0,674,6945,
#Deleted in new
chr8_KI270816v1_alt	80011	87151	chr8_KI270816v1_alt:80011-87151	0	-	80011	80121	789624	2	110,257,	0,6883,
#Deleted in new
chr8_KI270816v1_alt	80027	87453	chr8_KI270816v1_alt:80027-87453	0	-	80027	80121	789624	4	94,131,247,66,	0,620,2659,7360,
#Deleted in new
chr8_KI270816v1_alt	80057	87455	chr8_KI270816v1_alt:80057-87455	0	-	80057	80121	789624	4	64,247,179,68,	0,2629,3875,7330,
#Deleted in new
chr8_KI270816v1_alt	82693	87454	chr8_KI270816v1_alt:82693-87454	0	-	82693	82693	8553170	4	240,179,103,67,	0,1239,1762,4694,
#Deleted in new
chr8_KI270816v1_alt	87874	93264	chr8_KI270816v1_alt:87874-93264	3	+	87943	89872	789624	1	5390,	0,
#Deleted in new
chr8_KI270816v1_alt	93952	99654	chr8_KI270816v1_alt:93952-99654	3	-	95739	99624	789624	6	1970,93,213,180,65,157,	0,2149,2554,3040,4149,5545,
#Deleted in new
chr8_KI270816v1_alt	94258	99614	chr8_KI270816v1_alt:94258-99614	1	-	95739	99588	789624	6	1664,93,213,180,65,117,	0,1843,2248,2734,3843,5239,
#Deleted in new
chr8_KI270816v1_alt	95374	99609	chr8_KI270816v1_alt:95374-99609	0	-	98872	99588	789624	7	548,93,213,180,65,113,112,	0,727,1132,1618,2727,3429,4123,
#Deleted in new
chr8_KI270816v1_alt	95525	99609	chr8_KI270816v1_alt:95525-99609	1	-	95739	99588	789624	6	397,93,153,180,65,112,	0,576,981,1467,2576,3972,
#Deleted in new
chr8_KI270816v1_alt	95586	99813	chr8_KI270816v1_alt:95586-99813	1	-	95739	96644	789624	6	336,93,213,180,65,98,	0,515,920,1406,2515,4129,
#Deleted in new
chr8_KI270816v1_alt	96155	98489	chr8_KI270816v1_alt:96155-98489	0	-	96155	96644	789624	5	39,213,180,65,82,	0,351,837,1946,2252,
#Deleted in new
chr8_KI270816v1_alt	96507	99597	chr8_KI270816v1_alt:96507-99597	0	-	96507	96507	8553170	3	665,65,100,	0,1594,2990,
#Deleted in new
chr8_KI270816v1_alt	102657	107606	chr8_KI270816v1_alt:102657-107606	3	-	102949	106752	0	11	348,100,80,67,65,134,74,129,115,157,93,	0,578,906,1133,1546,1702,2006,2169,3488,3949,4856,
#Deleted in new
chr8_KI270816v1_alt	102657	104425	chr8_KI270816v1_alt:102657-104425	0	-	102657	102657	8553170	4	348,100,294,222,	0,578,906,1546,
#Deleted in new
chr8_KI270816v1_alt	102657	107522	chr8_KI270816v1_alt:102657-107522	1	-	102949	106752	0	11	348,100,80,67,65,134,74,129,115,157,55,	0,578,906,1133,1546,1702,2006,2169,3488,3949,4810,
#Deleted in new
chr8_KI270816v1_alt	102657	103647	chr8_KI270816v1_alt:102657-103647	0	-	103224	103647	789624	2	678,84,	0,906,
#Deleted in new
chr8_KI270816v1_alt	102657	107544	chr8_KI270816v1_alt:102657-107544	0	-	102657	102657	8553170	9	348,100,80,67,65,378,129,115,938,	0,578,906,1133,1546,1702,2169,3488,3949,
#Deleted in new
chr8_KI270816v1_alt	102660	103431	chr8_KI270816v1_alt:102660-103431	0	-	102660	102660	8553170	2	345,196,	0,575,
#Deleted in new
chr8_KI270816v1_alt	103568	107514	chr8_KI270816v1_alt:103568-107514	0	-	103568	106752	789624	9	75,67,65,134,74,129,115,157,53,	0,222,635,791,1095,1258,2577,3038,3893,
#Deleted in new
chr8_KI270816v1_alt	103809	107572	chr8_KI270816v1_alt:103809-107572	0	-	103809	103809	8553170	7	48,65,378,129,115,157,59,	0,394,550,1017,2336,2797,3704,
#Deleted in new
chr8_KI270816v1_alt	104361	107340	chr8_KI270816v1_alt:104361-107340	0	-	104361	107134	789624	6	132,74,129,115,157,264,	0,302,465,1784,2245,2715,
#Deleted in new
chr8_KI270816v1_alt	104403	107551	chr8_KI270816v1_alt:104403-107551	0	-	106278	106752	789624	6	90,74,129,335,157,38,	0,260,423,1742,2203,3110,
#Deleted in new
chr8_KI270816v1_alt	104444	106766	chr8_KI270816v1_alt:104444-106766	0	-	104444	104444	8553170	4	267,129,115,160,	0,382,1701,2162,
#Deleted in new
chr8_KI270816v1_alt	104686	107547	chr8_KI270816v1_alt:104686-107547	0	-	104686	104686	8553170	4	269,115,157,34,	0,1459,1920,2827,
#Deleted in new
chr8_KI270816v1_alt	104860	108088	chr8_KI270816v1_alt:104860-108088	0	-	104860	106752	789624	4	95,115,157,121,	0,1285,1746,3107,
#Deleted in new
chr8_KI270816v1_alt	104902	106504	chr8_KI270816v1_alt:104902-106504	0	-	104902	106193	789624	2	53,359,	0,1243,
#Deleted in new
chr8_KI270816v1_alt	105925	107589	chr8_KI270816v1_alt:105925-107589	0	-	105925	105925	8553170	3	335,157,76,	0,681,1588,
#Deleted in new
chr8_KI270816v1_alt	105982	107592	chr8_KI270816v1_alt:105982-107592	0	-	105982	105982	8553170	2	781,79,	0,1531,
#Deleted in new
chr8_KI270816v1_alt	111842	127845	chr8_KI270816v1_alt:111842-127845	3	+	125461	126952	789624	2	133,2479,	0,13524,
#Deleted in new
chr8_KI270816v1_alt	111991	127845	chr8_KI270816v1_alt:111991-127845	1	+	125461	126952	789624	2	254,2479,	0,13375,
#Deleted in new
chr8_KI270816v1_alt	125128	131885	chr8_KI270816v1_alt:125128-131885	1	+	125341	126952	789624	1	6757,	0,
#Deleted in new
chr8_KI270816v1_alt	161498	170877	chr8_KI270816v1_alt:161498-170877	0	+	167155	168272	789624	5	91,67,160,117,160,	0,5605,6621,7145,9219,
#Deleted in new
chr8_KI270816v1_alt	161498	168521	chr8_KI270816v1_alt:161498-168521	0	+	161498	161498	8553170	3	91,67,402,	0,5605,6621,
#Deleted in new
chr8_KI270816v1_alt	161499	170886	chr8_KI270816v1_alt:161499-170886	0	+	167155	170886	789624	5	90,67,127,114,169,	0,5604,6620,7147,9218,
#Deleted in new
chr8_KI270816v1_alt	161502	172403	chr8_KI270816v1_alt:161502-172403	0	+	167155	168272	789624	5	87,67,160,114,1686,	0,5601,6617,7144,9215,
#Deleted in new
chr8_KI270816v1_alt	161508	167466	chr8_KI270816v1_alt:161508-167466	0	+	161508	161508	8553170	2	81,363,	0,5595,
#Deleted in new
chr8_KI270816v1_alt	161508	170819	chr8_KI270816v1_alt:161508-170819	0	+	167155	169314	789624	6	81,67,127,114,86,102,	0,5595,6611,7138,7783,9209,
#Deleted in new
chr8_KI270816v1_alt	161519	168741	chr8_KI270816v1_alt:161519-168741	0	+	167155	168741	789624	6	70,132,98,67,127,95,	0,151,4731,5584,6600,7127,
#Deleted in new
chr8_KI270816v1_alt	161519	170874	chr8_KI270816v1_alt:161519-170874	0	+	167155	170874	789624	5	70,67,127,104,157,	0,5584,6600,7137,9198,
#Deleted in new
chr8_KI270816v1_alt	161525	170803	chr8_KI270816v1_alt:161525-170803	0	+	167155	168272	789624	6	64,98,67,160,114,86,	0,2902,5578,6594,7121,9192,
#Deleted in new
chr8_KI270816v1_alt	161525	170770	chr8_KI270816v1_alt:161525-170770	0	+	167155	168272	789624	6	64,98,67,160,114,53,	0,4725,5578,6594,7121,9192,
#Deleted in new
chr8_KI270816v1_alt	161527	172432	chr8_KI270816v1_alt:161527-172432	3	+	167155	171577	789624	6	62,98,67,127,114,1715,	0,4723,5576,6592,7119,9190,
#Deleted in new
chr8_KI270816v1_alt	161527	168440	chr8_KI270816v1_alt:161527-168440	0	+	161527	161527	8553170	4	62,98,67,321,	0,4723,5576,6592,
#Deleted in new
chr8_KI270816v1_alt	161527	168961	chr8_KI270816v1_alt:161527-168961	0	+	161527	161527	8553170	4	62,67,127,315,	0,5576,6592,7119,
#Deleted in new
chr8_KI270816v1_alt	161527	168747	chr8_KI270816v1_alt:161527-168747	1	+	167155	168272	789624	6	62,74,98,67,160,101,	0,3513,4723,5576,6592,7119,
#Deleted in new
chr8_KI270816v1_alt	161528	167146	chr8_KI270816v1_alt:161528-167146	0	+	161528	161528	8553170	2	586,43,	0,5575,
#Deleted in new
chr8_KI270816v1_alt	161528	168858	chr8_KI270816v1_alt:161528-168858	0	+	161528	161528	8553170	5	61,98,67,127,212,	0,4722,5575,6591,7118,
#Deleted in new
chr8_KI270816v1_alt	161529	170795	chr8_KI270816v1_alt:161529-170795	0	+	161529	161529	8553170	5	60,160,114,86,78,	0,6590,7117,7762,9188,
#Deleted in new
chr8_KI270816v1_alt	161530	172431	chr8_KI270816v1_alt:161530-172431	0	+	161530	161530	8553170	3	59,1258,1714,	0,6589,9187,
#Deleted in new
chr8_KI270816v1_alt	161530	189784	chr8_KI270816v1_alt:161530-189784	0	+	161530	161530	8553170	4	59,1029,56,108,	0,9187,24769,28146,
#Deleted in new
chr8_KI270816v1_alt	161533	168246	chr8_KI270816v1_alt:161533-168246	0	+	167155	168246	789624	4	56,312,67,127,	0,269,5570,6586,
#Deleted in new
chr8_KI270816v1_alt	161538	172404	chr8_KI270816v1_alt:161538-172404	1	+	167155	171577	789624	7	51,74,98,67,127,114,1687,	0,3502,4712,5565,6581,7108,9179,
#Deleted in new
chr8_KI270816v1_alt	161551	168473	chr8_KI270816v1_alt:161551-168473	0	+	161551	161551	8553170	4	38,132,67,354,	0,119,5552,6568,
#Deleted in new
chr8_KI270816v1_alt	161553	170750	chr8_KI270816v1_alt:161553-170750	0	+	167155	169103	789624	7	36,67,127,114,107,86,33,	0,5550,6566,7093,7494,7738,9164,
#Deleted in new
chr8_KI270816v1_alt	161554	172427	chr8_KI270816v1_alt:161554-172427	1	+	167155	171577	789624	8	35,98,74,640,67,127,114,1710,	0,2409,3486,4154,5549,6565,7092,9163,
#Deleted in new
chr8_KI270816v1_alt	161554	171006	chr8_KI270816v1_alt:161554-171006	0	+	168212	171006	789624	4	35,127,114,289,	0,6565,7092,9163,
#Deleted in new
chr8_KI270816v1_alt	161556	170758	chr8_KI270816v1_alt:161556-170758	0	+	161556	161556	8553170	4	33,301,114,41,	0,6389,7090,9161,
#Deleted in new
chr8_KI270816v1_alt	165705	172427	chr8_KI270816v1_alt:165705-172427	1	+	167155	171577	789624	5	643,67,127,114,1710,	0,1398,2414,2941,5012,
#Deleted in new
chr8_KI270816v1_alt	168561	171076	chr8_KI270816v1_alt:168561-171076	0	+	168561	168561	8553170	2	199,359,	0,2156,
#Deleted in new
chr8_KI270816v1_alt	173200	175460	chr8_KI270816v1_alt:173200-175460	3	+	173200	173200	789624	2	1488,475,	0,1785,
#Deleted in new
chr8_KI270816v1_alt	183740	185156	chr8_KI270816v1_alt:183740-185156	3	-	183740	185156	789624	2	876,444,	0,972,
#Deleted in new
chr8_KI270816v1_alt	185097	190945	chr8_KI270816v1_alt:185097-190945	0	+	185097	185097	789624	6	86,56,68,19,178,881,	0,1202,2697,4033,4579,4967,
#Deleted in new
chr8_KI270816v1_alt	186053	190631	chr8_KI270816v1_alt:186053-190631	3	-	186053	186053	8553170	4	163,74,96,41,	0,3927,4308,4537,
#Deleted in new
chr8_KI270816v1_alt	193305	199505	chr8_KI270816v1_alt:193305-199505	3	+	193424	199298	789624	14	185,99,30,91,131,164,140,58,138,106,181,125,129,384,	0,1435,1788,1953,2516,2734,3084,3971,4444,4741,4972,5290,5493,5816,
#Deleted in new
chr8_KI270816v1_alt	193386	197334	chr8_KI270816v1_alt:193386-197334	0	+	193424	197334	789624	8	104,99,30,91,182,164,140,58,	0,1354,1707,1872,2384,2653,3003,3890,
#Deleted in new
chr8_KI270816v1_alt	193386	199505	chr8_KI270816v1_alt:193386-199505	0	+	193386	193386	8553170	12	104,99,30,91,182,164,140,611,181,125,129,384,	0,1354,1707,1872,2384,2653,3003,3890,4891,5209,5412,5735,
#Deleted in new
chr8_KI270816v1_alt	193395	195349	chr8_KI270816v1_alt:193395-195349	0	+	193395	193395	8553170	2	95,256,	0,1698,
#Deleted in new
chr8_KI270816v1_alt	193424	197638	chr8_KI270816v1_alt:193424-197638	0	+	193424	193424	8553170	8	66,99,30,91,131,164,140,44,	0,1316,1669,1834,2397,2615,2965,4170,
#Deleted in new
chr8_KI270816v1_alt	195292	195938	chr8_KI270816v1_alt:195292-195938	3	-	195292	195292	8553170	2	190,109,	0,537,
#Deleted in new
chr8_KI270816v1_alt	197238	198403	chr8_KI270816v1_alt:197238-198403	0	+	197238	197238	8553170	3	649,106,126,	0,808,1039,
#Deleted in new
chr8_KI270816v1_alt	197744	198906	chr8_KI270816v1_alt:197744-198906	0	+	197744	197744	8553170	3	143,674,108,	0,302,1054,
#Deleted in new
chr8_KI270816v1_alt	198594	199179	chr8_KI270816v1_alt:198594-199179	0	+	198594	198594	8553170	2	126,381,	0,204,
#Deleted in new
chr8_KI270816v1_alt	200979	210848	chr8_KI270816v1_alt:200979-210848	3	-	202967	207629	789624	5	4791,125,165,462,111,	0,5034,5226,6203,9758,
#Deleted in new
chr8_KI270816v1_alt	200980	205687	chr8_KI270816v1_alt:200980-205687	0	-	202967	205687	789624	2	421,3190,	0,1517,
#Deleted in new
chr8_KI270816v1_alt	211186	223384	chr8_KI270816v1_alt:211186-223384	3	+	211186	211186	789624	4	80,89,90,2478,	0,1710,5719,9720,
#Deleted in new
chr8_KI270816v1_alt	216442	219182	chr8_KI270816v1_alt:216442-219182	1	+	216442	216442	8553170	3	108,90,384,	0,463,2356,
#Deleted in new
chr8_KI270816v1_alt	218139	223383	chr8_KI270816v1_alt:218139-223383	0	+	218139	218139	8553170	1	5244,	0,
#Deleted in new
chr8_KI270816v1_alt	265966	267182	chr8_KI270816v1_alt:265966-267182	1	+	265966	265966	8553170	4	144,55,125,375,	0,269,484,841,
#Deleted in new
chr8_KI270816v1_alt	266025	267506	chr8_KI270816v1_alt:266025-267506	3	+	266025	266025	8553170	7	62,55,93,109,94,135,110,	0,210,457,782,992,1158,1371,
#Deleted in new
chr8_KI270816v1_alt	266561	267322	chr8_KI270816v1_alt:266561-267322	0	+	266561	266561	8553170	3	14,109,305,	0,246,456,
#Deleted in new
chr8_KI270816v1_alt	267966	292426	chr8_KI270816v1_alt:267966-292426	1	-	268209	292419	789624	37	389,52,75,38,143,186,151,160,108,63,75,57,111,189,294,111,258,81,324,78,90,63,417,168,126,131,167,200,119,145,75,64,57,90,79,118,166,	0,469,746,956,1071,1300,1565,1788,2056,2980,4118,4357,4500,12463,12727,13126,13648,14014,14192,15487,16004,16632,17689,18631,19559,19766,19986,20226,21346,21897,22110,22391,22550,22717,22898,23081,24294,
#Deleted in new
chr8_KI270816v1_alt	267966	292426	chr8_KI270816v1_alt:267966-292426	1	-	268209	292419	789624	36	389,52,38,143,186,151,160,108,63,75,57,111,189,294,111,258,81,324,78,90,63,417,168,126,131,167,200,119,145,75,64,57,90,79,118,166,	0,469,956,1071,1300,1565,1788,2056,2980,4118,4357,4500,12463,12727,13126,13648,14014,14192,15487,16004,16632,17689,18631,19559,19766,19986,20226,21346,21897,22110,22391,22550,22717,22898,23081,24294,
#Deleted in new
chr8_KI270816v1_alt	267971	268589	chr8_KI270816v1_alt:267971-268589	0	-	267971	267971	8553170	2	384,154,	0,464,
#Deleted in new
chr8_KI270816v1_alt	267971	270635	chr8_KI270816v1_alt:267971-270635	0	-	267971	267971	8553170	7	384,52,143,182,151,160,613,	0,464,1066,1295,1560,1783,2051,
#Deleted in new
chr8_KI270816v1_alt	267971	281198	chr8_KI270816v1_alt:267971-281198	0	-	268209	281198	789624	14	384,52,38,143,186,383,108,63,75,57,111,189,294,106,	0,464,951,1066,1295,1560,2051,2975,4113,4352,4495,12458,12722,13121,
#Deleted in new
chr8_KI270816v1_alt	267972	292015	chr8_KI270816v1_alt:267972-292015	1	-	268209	291081	789624	36	383,52,38,143,186,151,160,108,63,75,57,111,189,294,111,258,81,324,78,90,63,417,168,126,131,167,200,119,145,75,64,57,90,79,118,137,	0,463,950,1065,1294,1559,1782,2050,2974,4112,4351,4494,12457,12721,13120,13642,14008,14186,15481,15998,16626,17683,18625,19553,19760,19980,20220,21340,21891,22104,22385,22544,22711,22892,23075,23906,
#Deleted in new
chr8_KI270816v1_alt	269655	271283	chr8_KI270816v1_alt:269655-271283	0	-	269655	269655	8553170	5	27,160,108,63,158,	0,99,367,1291,1470,
#Deleted in new
chr8_KI270816v1_alt	282298	285724	chr8_KI270816v1_alt:282298-285724	2	-	282298	285724	789624	4	184,78,90,69,	0,1155,1672,3357,
#Deleted in new
chr8_KI270817v1_alt	2772	8685	chr8_KI270817v1_alt:2772-8685	0	-	2772	2772	8553170	2	88,238,	0,5675,
#Deleted in new
chr8_KI270817v1_alt	2772	2860	chr8_KI270817v1_alt:2772-2860	0	-	2772	2772	8553170	1	88,	0,
#Deleted in new
chr8_KI270817v1_alt	6953	8725	chr8_KI270817v1_alt:6953-8725	3	-	6953	6953	8553170	2	481,278,	0,1494,
#Deleted in new
chr8_KI270817v1_alt	8269	12698	chr8_KI270817v1_alt:8269-12698	1	+	8304	11710	789624	4	266,104,120,845,	0,2906,3332,3584,
#Deleted in new
chr8_KI270817v1_alt	8447	8678	chr8_KI270817v1_alt:8447-8678	0	-	8447	8447	8553170	1	231,	0,
#Deleted in new
chr8_KI270817v1_alt	8447	8669	chr8_KI270817v1_alt:8447-8669	0	-	8447	8447	8553170	1	222,	0,
#Deleted in new
chr8_KI270817v1_alt	8769	12700	chr8_KI270817v1_alt:8769-12700	1	+	11227	12077	789624	4	105,109,120,847,	0,2401,2832,3084,
#Deleted in new
chr8_KI270817v1_alt	8770	12698	chr8_KI270817v1_alt:8770-12698	1	+	11227	12077	789624	4	104,104,120,845,	0,2405,2831,3083,
#Deleted in new
chr8_KI270817v1_alt	8804	12699	chr8_KI270817v1_alt:8804-12699	1	+	11227	12077	789624	5	70,116,104,120,846,	0,1745,2371,2797,3049,
#Deleted in new
chr8_KI270817v1_alt	8815	12697	chr8_KI270817v1_alt:8815-12697	1	+	11227	12077	789624	5	59,287,109,120,844,	0,305,2355,2786,3038,
#Deleted in new
chr8_KI270817v1_alt	8815	11928	chr8_KI270817v1_alt:8815-11928	1	+	11227	11771	789624	3	59,104,327,	0,2360,2786,
#Deleted in new
chr8_KI270817v1_alt	8816	12212	chr8_KI270817v1_alt:8816-12212	1	+	11227	11710	789624	4	58,104,85,359,	0,2359,2820,3037,
#Deleted in new
chr8_KI270817v1_alt	8816	12190	chr8_KI270817v1_alt:8816-12190	1	+	11227	12077	789624	5	58,116,109,120,337,	0,1733,2354,2785,3037,
#Deleted in new
chr8_KI270817v1_alt	8829	12470	chr8_KI270817v1_alt:8829-12470	1	+	11227	12077	789624	4	45,75,120,617,	0,2375,2772,3024,
#Deleted in new
chr8_KI270817v1_alt	8831	12088	chr8_KI270817v1_alt:8831-12088	3	+	11227	11865	789624	5	43,116,104,120,252,	0,1718,2344,2770,3005,
#Deleted in new
chr8_KI270817v1_alt	8833	12697	chr8_KI270817v1_alt:8833-12697	1	+	11227	11710	789624	4	41,109,85,844,	0,2337,2803,3020,
#Deleted in new
chr8_KI270817v1_alt	8839	12543	chr8_KI270817v1_alt:8839-12543	1	+	11227	11865	789624	4	35,109,120,707,	0,2331,2762,2997,
#Deleted in new
chr8_KI270817v1_alt	8840	14120	chr8_KI270817v1_alt:8840-14120	1	+	11227	13985	789624	4	34,109,120,164,	0,2330,2761,5116,
#Deleted in new
chr8_KI270817v1_alt	8844	12180	chr8_KI270817v1_alt:8844-12180	1	+	11227	12077	789624	5	30,287,104,120,327,	0,276,2331,2757,3009,
#Deleted in new
chr8_KI270817v1_alt	12836	14118	chr8_KI270817v1_alt:12836-14118	0	+	12836	12836	8553170	2	494,162,	0,1120,
#Deleted in new
chr8_KI270817v1_alt	29496	44226	chr8_KI270817v1_alt:29496-44226	0	+	29496	29496	789624	6	361,85,169,136,90,713,	0,3969,5440,8470,10000,14017,
#Deleted in new
chr8_KI270817v1_alt	29548	43732	chr8_KI270817v1_alt:29548-43732	1	+	29548	29548	789624	8	309,130,85,61,169,136,90,219,	0,3697,3917,4913,5388,8418,9948,13965,
#Deleted in new
chr8_KI270817v1_alt	29548	33531	chr8_KI270817v1_alt:29548-33531	0	+	29548	29548	8553170	2	309,286,	0,3697,
#Deleted in new
chr8_KI270817v1_alt	29548	32807	chr8_KI270817v1_alt:29548-32807	0	+	29548	29548	8553170	2	309,269,	0,2990,
#Deleted in new
chr8_KI270817v1_alt	29549	44591	chr8_KI270817v1_alt:29549-44591	3	+	29549	29549	8553170	6	308,130,100,169,90,1078,	0,3696,3901,5387,9947,13964,
#Deleted in new
chr8_KI270817v1_alt	29582	50230	chr8_KI270817v1_alt:29582-50230	0	+	29582	29582	8553170	4	275,136,90,290,	0,8384,9914,20358,
#Deleted in new
chr8_KI270817v1_alt	33289	39540	chr8_KI270817v1_alt:33289-39540	0	+	33289	33289	8553170	4	86,100,169,44,	0,161,1647,6207,
#Deleted in new
chr8_KI270817v1_alt	33495	38272	chr8_KI270817v1_alt:33495-38272	0	+	33495	33495	8553170	3	55,169,306,	0,1441,4471,
#Deleted in new
chr8_KI270817v1_alt	47346	48104	chr8_KI270817v1_alt:47346-48104	7	-	47346	47346	16724991	2	171,267,	0,491,
#Deleted in new
chr8_KI270817v1_alt	56203	56891	chr8_KI270817v1_alt:56203-56891	7	-	56203	56203	16724991	2	223,121,	0,567,
#Deleted in new
chr8_KI270817v1_alt	76022	78566	chr8_KI270817v1_alt:76022-78566	3	+	76619	78217	789624	4	203,91,117,576,	0,579,754,1968,
#Deleted in new
chr8_KI270817v1_alt	153498	155625	chr8_KI270817v1_alt:153498-155625	1	-	153834	155233	789624	4	572,120,128,105,	0,889,1668,2022,
#Deleted in new
chr8_KI270817v1_alt	153498	156296	chr8_KI270817v1_alt:153498-156296	3	-	153834	155784	789624	5	572,120,128,70,166,	0,889,1668,2284,2632,
#Deleted in new
chr8_KI270817v1_alt	153498	155913	chr8_KI270817v1_alt:153498-155913	1	-	153834	155784	789624	4	572,120,128,131,	0,889,1668,2284,
#Deleted in new
chr8_KI270817v1_alt	153498	155894	chr8_KI270817v1_alt:153498-155894	0	-	153498	153498	8553170	3	572,907,112,	0,889,2284,
#Deleted in new
chr8_KI270818v1_alt	6778	7468	chr8_KI270818v1_alt:6778-7468	3	-	6778	6778	8553170	2	215,101,	0,589,
#Deleted in new
chr8_KI270818v1_alt	12730	12788	chr8_KI270818v1_alt:12730-12788	0	-	12730	12752	789624	1	58,	0,
#Deleted in new
chr8_KI270818v1_alt	12730	12830	chr8_KI270818v1_alt:12730-12830	3	-	12730	12752	789624	1	100,	0,
#Deleted in new
chr8_KI270818v1_alt	19241	106178	chr8_KI270818v1_alt:19241-106178	0	+	19241	19241	789624	2	175,102,	0,86835,
#Deleted in new
chr8_KI270818v1_alt	19254	35849	chr8_KI270818v1_alt:19254-35849	3	+	19254	19254	8553170	2	162,803,	0,15792,
#Deleted in new
chr8_KI270818v1_alt	19332	106178	chr8_KI270818v1_alt:19332-106178	0	+	19332	19332	8553170	2	84,102,	0,86744,
#Deleted in new
chr8_KI270818v1_alt	19374	19697	chr8_KI270818v1_alt:19374-19697	0	-	19374	19374	8553170	1	323,	0,
#Deleted in new
chr8_KI270818v1_alt	20138	21965	chr8_KI270818v1_alt:20138-21965	3	+	20138	20138	789624	1	1827,	0,
#Deleted in new
chr8_KI270819v1_alt	7102	11175	chr8_KI270819v1_alt:7102-11175	3	+	7102	7102	789624	4	124,136,258,278,	0,1792,2409,3795,
#Deleted in new
chr8_KI270819v1_alt	8878	11175	chr8_KI270819v1_alt:8878-11175	0	+	8878	8878	8553170	3	152,258,278,	0,633,2019,
#Deleted in new
chr8_KI270819v1_alt	19956	21919	chr8_KI270819v1_alt:19956-21919	3	-	19956	19956	8553170	1	1963,	0,
#Deleted in new
chr8_KI270819v1_alt	23053	33821	chr8_KI270819v1_alt:23053-33821	3	-	23400	24477	789624	2	1448,67,	0,10701,
#Deleted in new
chr8_KI270819v1_alt	58544	103750	chr8_KI270819v1_alt:58544-103750	3	+	94696	103500	0	6	92,958,93,131,75,368,	0,35299,38959,40850,41661,44838,
#Deleted in new
chr8_KI270819v1_alt	58546	103976	chr8_KI270819v1_alt:58546-103976	1	+	94696	103500	0	5	90,958,93,131,594,	0,35297,38957,40848,44836,
#Deleted in new
chr8_KI270819v1_alt	58572	99407	chr8_KI270819v1_alt:58572-99407	0	+	94696	99407	789624	5	64,223,165,93,13,	0,35271,36064,38931,40822,
#Deleted in new
chr8_KI270819v1_alt	79888	94095	chr8_KI270819v1_alt:79888-94095	0	+	79888	79888	8553170	2	262,252,	0,13955,
#Deleted in new
chr8_KI270819v1_alt	82055	94247	chr8_KI270819v1_alt:82055-94247	0	+	82055	82055	8553170	2	138,404,	0,11788,
#Deleted in new
chr8_KI270819v1_alt	82466	94341	chr8_KI270819v1_alt:82466-94341	0	+	82466	82466	8553170	2	77,498,	0,11377,
#Deleted in new
chr8_KI270819v1_alt	90361	94336	chr8_KI270819v1_alt:90361-94336	0	+	90361	90361	8553170	2	113,493,	0,3482,
#Deleted in new
chr8_KI270819v1_alt	90364	94296	chr8_KI270819v1_alt:90364-94296	0	+	90364	90364	8553170	2	123,453,	0,3479,
#Deleted in new
chr8_KI270819v1_alt	90382	94233	chr8_KI270819v1_alt:90382-94233	0	+	90382	90382	8553170	3	92,65,390,	0,462,3461,
#Deleted in new
chr8_KI270819v1_alt	93843	104910	chr8_KI270819v1_alt:93843-104910	1	+	94696	103500	0	4	958,93,131,1528,	0,3660,5551,9539,
#Deleted in new
chr8_KI270819v1_alt	93843	104910	chr8_KI270819v1_alt:93843-104910	1	+	94696	103500	0	5	958,93,131,75,1528,	0,3660,5551,6362,9539,
#Deleted in new
chr8_KI270819v1_alt	106284	122205	chr8_KI270819v1_alt:106284-122205	0	-	106284	106284	789624	9	230,75,123,156,144,115,144,182,160,	0,722,1298,2084,6397,7314,7807,14078,15761,
#Deleted in new
chr8_KI270819v1_alt	106284	122205	chr8_KI270819v1_alt:106284-122205	0	-	106284	106284	789624	11	230,75,103,123,156,177,144,115,144,182,160,	0,722,995,1298,2084,2857,6397,7314,7807,14078,15761,
#Deleted in new
chr8_KI270819v1_alt	106287	122205	chr8_KI270819v1_alt:106287-122205	3	-	106413	122205	789624	11	227,75,103,123,156,177,144,115,144,182,160,	0,719,992,1295,2081,2854,6394,7311,7804,14075,15758,
#Deleted in new
chr8_KI270819v1_alt	109783	110410	chr8_KI270819v1_alt:109783-110410	3	+	109783	109783	8553170	2	193,245,	0,382,
#Deleted in new
chr8_KI270819v1_alt	119930	120005	chr8_KI270819v1_alt:119930-120005	3	+	119930	119930	8553170	1	75,	0,
#Deleted in new
chr8_KI270819v1_alt	131530	132487	chr8_KI270819v1_alt:131530-132487	7	+	131530	131530	16724991	1	957,	0,
#Deleted in new
chr8_KI270821v1_alt	7351	142009	chr8_KI270821v1_alt:7351-142009	1	+	26775	140639	789624	29	138,84,156,288,64,77,57,164,117,115,107,78,180,117,93,171,146,176,116,128,101,122,87,224,158,143,175,123,1885,	0,19377,33984,35921,40397,42550,45218,52595,56072,58659,61625,69593,70417,72357,74457,79305,81595,85319,98988,99492,99798,101307,102401,104451,105310,109824,121505,128729,132773,
#Deleted in new
chr8_KI270821v1_alt	7363	142017	chr8_KI270821v1_alt:7363-142017	3	+	26775	140639	789624	28	126,84,156,288,67,77,57,164,115,107,78,180,117,93,171,146,176,116,128,101,122,87,224,158,143,175,123,1893,	0,19365,33972,35909,40382,42538,45206,52583,58647,61613,69581,70405,72345,74445,79293,81583,85307,98976,99480,99786,101295,102389,104439,105298,109812,121493,128717,132761,
#Deleted in new
chr8_KI270821v1_alt	7390	142017	chr8_KI270821v1_alt:7390-142017	1	+	9486	140639	789624	30	99,89,84,156,288,67,77,57,164,117,115,107,78,180,117,90,171,146,176,116,128,101,122,87,224,158,143,175,123,1893,	0,2032,19338,33945,35882,40355,42511,45179,52556,56033,58620,61586,69554,70378,72318,74421,79266,81556,85280,98949,99453,99759,101268,102362,104412,105271,109785,121466,128690,132734,
#Deleted in new
chr8_KI270821v1_alt	9486	142009	chr8_KI270821v1_alt:9486-142009	1	+	9486	140639	789624	29	25,84,156,288,67,77,57,164,117,115,107,78,180,117,93,171,146,176,116,128,101,122,87,224,158,143,175,123,1885,	0,17242,31849,33786,38259,40415,43083,50460,53937,56524,59490,67458,68282,70222,72322,77170,79460,83184,96853,97357,97663,99172,100266,102316,103175,107689,119370,126594,130638,
#Deleted in new
chr8_KI270821v1_alt	18906	43468	chr8_KI270821v1_alt:18906-43468	0	+	18906	18906	8553170	3	181,156,196,	0,22429,24366,
#Deleted in new
chr8_KI270821v1_alt	30826	31292	chr8_KI270821v1_alt:30826-31292	3	+	30826	30826	8553170	1	466,	0,
#Deleted in new
chr8_KI270821v1_alt	42130	87472	chr8_KI270821v1_alt:42130-87472	1	+	49971	86881	789624	13	62,288,67,77,57,164,115,107,78,180,117,93,816,	0,1142,5615,7771,10439,17816,23880,26846,34814,35638,37578,39678,44526,
#Deleted in new
chr8_KI270821v1_alt	42130	59990	chr8_KI270821v1_alt:42130-59990	0	+	42130	42130	8553170	6	62,288,67,77,57,44,	0,1142,5615,7771,10439,17816,
#Deleted in new
chr8_KI270821v1_alt	43269	87486	chr8_KI270821v1_alt:43269-87486	0	+	43269	43269	8553170	12	291,67,77,57,164,115,107,78,180,117,93,830,	0,4476,6632,9300,16677,22741,25707,33675,34499,36439,38539,43387,
#Deleted in new
chr8_KI270821v1_alt	43290	54507	chr8_KI270821v1_alt:43290-54507	0	+	43290	43290	8553170	4	270,64,77,1938,	0,4458,6611,9279,
#Deleted in new
chr8_KI270821v1_alt	59426	110889	chr8_KI270821v1_alt:59426-110889	0	+	59426	59426	8553170	15	684,115,107,78,180,117,93,171,146,176,116,128,101,119,1137,	0,6584,9550,17518,18342,20282,22382,27230,29520,33244,46913,47417,47723,49235,50326,
#Deleted in new
chr8_KI270821v1_alt	66031	142015	chr8_KI270821v1_alt:66031-142015	0	+	66031	140639	789624	19	94,107,78,180,117,93,171,146,176,116,128,101,122,224,158,143,175,123,1891,	0,2945,10913,11737,13677,15777,20625,22915,26639,40308,40812,41118,42627,45771,46630,51144,62825,70049,74093,
#Deleted in new
chr8_KI270821v1_alt	87610	106866	chr8_KI270821v1_alt:87610-106866	0	+	87610	87610	8553170	5	77,146,176,116,23,	0,1336,5060,18729,19233,
#Deleted in new
chr8_KI270821v1_alt	106571	107250	chr8_KI270821v1_alt:106571-107250	0	+	106571	106571	8553170	2	400,101,	0,578,
#Deleted in new
chr8_KI270821v1_alt	118122	121592	chr8_KI270821v1_alt:118122-121592	3	-	118122	118122	8553170	1	3470,	0,
#Deleted in new
chr8_KI270821v1_alt	126969	136150	chr8_KI270821v1_alt:126969-136150	0	+	126969	126969	8553170	3	314,175,70,	0,1887,9111,
#Deleted in new
chr8_KI270821v1_alt	126970	129295	chr8_KI270821v1_alt:126970-129295	0	+	126970	126970	8553170	2	118,439,	0,1886,
#Deleted in new
chr8_KI270821v1_alt	127029	140581	chr8_KI270821v1_alt:127029-140581	0	+	127029	127029	8553170	4	59,175,123,457,	0,1827,9051,13095,
#Deleted in new
chr8_KI270821v1_alt	154772	159854	chr8_KI270821v1_alt:154772-159854	3	+	154772	154772	789624	3	122,113,580,	0,528,4502,
#Deleted in new
chr8_KI270821v1_alt	155945	156986	chr8_KI270821v1_alt:155945-156986	1	-	155945	155945	8553170	2	94,463,	0,578,
#Deleted in new
chr8_KI270821v1_alt	156196	158013	chr8_KI270821v1_alt:156196-158013	3	-	156196	156196	8553170	3	216,198,31,	0,327,1786,
#Deleted in new
chr8_KI270821v1_alt	157253	190312	chr8_KI270821v1_alt:157253-190312	3	+	184568	186440	789624	2	58,6652,	0,26407,
#Deleted in new
chr8_KI270821v1_alt	158193	158690	chr8_KI270821v1_alt:158193-158690	3	+	158193	158193	8553170	1	497,	0,
#Deleted in new
chr8_KI270821v1_alt	216859	222723	chr8_KI270821v1_alt:216859-222723	3	+	216859	216859	8553170	3	291,122,224,	0,1959,5640,
#Deleted in new
chr8_KI270821v1_alt	228364	328590	chr8_KI270821v1_alt:228364-328590	3	+	234090	328115	789624	37	129,119,156,139,158,93,89,51,165,162,142,200,54,128,184,175,122,188,127,179,115,157,107,45,137,145,60,68,114,88,39,106,164,37,23,56,793,	0,5714,7121,12311,12586,14119,24242,24411,27270,28264,31066,33660,34486,40240,44676,47019,48642,50932,53532,55511,57302,60877,61126,63422,64031,70597,70855,72519,77970,78273,78897,83960,95491,95909,97145,98170,99433,
#Deleted in new
chr8_KI270821v1_alt	228393	328589	chr8_KI270821v1_alt:228393-328589	1	+	273121	328115	789624	24	100,184,175,122,188,127,179,115,157,107,45,137,145,60,68,114,88,39,106,164,37,23,56,792,	0,44647,46990,48613,50903,53503,55482,57273,60848,61097,63393,64002,70568,70826,72490,77941,78244,78868,83931,95462,95880,97116,98141,99404,
#Deleted in new
chr8_KI270821v1_alt	265130	273097	chr8_KI270821v1_alt:265130-273097	0	+	265130	265130	8553170	3	395,128,57,	0,3474,7910,
#Deleted in new
chr8_KI270821v1_alt	268341	277062	chr8_KI270821v1_alt:268341-277062	0	+	268341	268341	8553170	5	22,128,184,175,56,	0,263,4699,7042,8665,
#Deleted in new
chr8_KI270821v1_alt	281084	289298	chr8_KI270821v1_alt:281084-289298	0	+	281084	281084	8553170	5	67,127,179,115,57,	0,812,2791,4582,8157,
#Deleted in new
chr8_KI270821v1_alt	283443	289551	chr8_KI270821v1_alt:283443-289551	0	+	283443	283443	8553170	5	56,179,115,157,61,	0,432,2223,5798,6047,
#Deleted in new
chr8_KI270821v1_alt	285002	289516	chr8_KI270821v1_alt:285002-289516	0	+	285002	285002	8553170	4	260,115,157,26,	0,664,4239,4488,
#Deleted in new
chr8_KI270821v1_alt	292287	312373	chr8_KI270821v1_alt:292287-312373	0	+	292287	292287	8553170	8	245,145,60,68,114,88,39,49,	0,6674,6932,8596,14047,14350,14974,20037,
#Deleted in new
chr8_KI270821v1_alt	301863	323951	chr8_KI270821v1_alt:301863-323951	0	+	301863	301863	8553170	6	347,114,88,39,106,96,	0,4471,4774,5398,10461,21992,
#Deleted in new
chr8_KI270821v1_alt	302256	323959	chr8_KI270821v1_alt:302256-323959	0	+	302256	302256	8553170	6	194,114,88,39,106,104,	0,4078,4381,5005,10068,21599,
#Deleted in new
chr8_KI270821v1_alt	310932	328044	chr8_KI270821v1_alt:310932-328044	0	+	310932	310932	8553170	7	147,106,164,37,23,56,247,	0,1392,12923,13341,14577,15602,16865,
#Deleted in new
chr8_KI270821v1_alt	310994	327977	chr8_KI270821v1_alt:310994-327977	0	+	310994	310994	8553170	6	85,106,164,23,56,180,	0,1330,12861,14515,15540,16803,
#Deleted in new
chr8_KI270821v1_alt	323875	328572	chr8_KI270821v1_alt:323875-328572	0	+	323875	323875	8553170	3	144,56,775,	0,2659,3922,
#Deleted in new
chr8_KI270821v1_alt	323981	348679	chr8_KI270821v1_alt:323981-348679	0	+	323981	323981	8553170	5	38,37,23,56,394,	0,292,1528,2553,24304,
#Deleted in new
chr8_KI270821v1_alt	326482	327900	chr8_KI270821v1_alt:326482-327900	0	+	326482	326482	8553170	2	108,103,	0,1315,
#Deleted in new
chr8_KI270821v1_alt	382432	385193	chr8_KI270821v1_alt:382432-385193	3	+	382432	382432	8553170	1	2761,	0,
#Deleted in new
chr8_KI270821v1_alt	661561	680263	chr8_KI270821v1_alt:661561-680263	3	-	661561	661561	8553170	3	216,148,148,	0,17046,18554,
#Deleted in new
chr8_KI270821v1_alt	686693	689878	chr8_KI270821v1_alt:686693-689878	3	+	686693	686693	8553170	3	226,91,242,	0,646,2943,
#Deleted in new
chr8_KI270821v1_alt	727669	791038	chr8_KI270821v1_alt:727669-791038	0	-	727669	727669	8553170	5	33,136,80,150,86,	0,35556,36616,44772,63283,
#Deleted in new
chr8_KI270821v1_alt	757645	791023	chr8_KI270821v1_alt:757645-791023	3	-	757645	757645	789624	5	1265,139,80,150,71,	0,5580,6640,14796,33307,
#Deleted in new
chr8_KI270821v1_alt	832576	834484	chr8_KI270821v1_alt:832576-834484	3	+	832576	832576	8553170	1	1908,	0,
#Deleted in new
chr8_KI270821v1_alt	834144	896517	chr8_KI270821v1_alt:834144-896517	3	-	834144	834144	8553170	4	110,229,116,122,	0,3702,8651,62251,
#Deleted in new
chr8_KI270821v1_alt	834167	896455	chr8_KI270821v1_alt:834167-896455	1	-	834167	834167	8553170	5	87,229,116,72,60,	0,3679,8628,39113,62228,
#Deleted in new
chr8_KI270821v1_alt	837867	896485	chr8_KI270821v1_alt:837867-896485	1	-	837867	837867	8553170	5	208,116,83,72,90,	0,4928,9055,35413,58528,
#Deleted in new
chr8_KI270821v1_alt	837894	896485	chr8_KI270821v1_alt:837894-896485	1	-	837894	837894	8553170	5	181,116,72,103,90,	0,4901,35386,51661,58501,
#Deleted in new
chr8_KI270821v1_alt	864618	896483	chr8_KI270821v1_alt:864618-896483	0	-	864618	864618	789624	3	418,72,88,	0,8662,31777,
#Deleted in new
chr8_KI270821v1_alt	869538	896483	chr8_KI270821v1_alt:869538-896483	1	-	869538	869538	8553170	3	422,72,88,	0,3742,26857,
#Deleted in new
chr8_KI270821v1_alt	895383	976500	chr8_KI270821v1_alt:895383-976500	3	+	895383	895383	8553170	3	176,124,68,	0,77268,81049,
#Deleted in new
chr8_KI270822v1_alt	7545	10684	chr8_KI270822v1_alt:7545-10684	3	+	7545	9383	789624	2	68,1395,	0,1744,
#Deleted in new
chr8_KI270822v1_alt	7545	10827	chr8_KI270822v1_alt:7545-10827	0	+	7545	7545	789624	2	68,1538,	0,1744,
#Deleted in new
chr8_KI270822v1_alt	7545	9312	chr8_KI270822v1_alt:7545-9312	0	+	7545	7545	8553170	2	68,23,	0,1744,
#Deleted in new
chr8_KI270822v1_alt	7545	10827	chr8_KI270822v1_alt:7545-10827	0	+	7545	7545	8553170	2	68,1538,	0,1744,
#Deleted in new
chr8_KI270822v1_alt	7545	10820	chr8_KI270822v1_alt:7545-10820	0	+	7545	7545	8553170	2	68,1531,	0,1744,
#Deleted in new
chr8_KI270822v1_alt	12672	57131	chr8_KI270822v1_alt:12672-57131	0	+	12731	57131	789624	6	210,80,62,76,77,72,	0,11096,29667,40140,42801,44387,
#Deleted in new
chr8_KI270822v1_alt	13211	66642	chr8_KI270822v1_alt:13211-66642	0	+	13458	66642	789624	7	305,80,62,76,77,49,63,	0,10557,29128,39601,42262,43971,53368,
#Deleted in new
chr8_KI270822v1_alt	13253	190624	chr8_KI270822v1_alt:13253-190624	3	+	13357	190514	789624	22	263,62,76,77,172,69,72,167,82,93,199,109,184,84,103,157,39,39,39,39,39,117,	0,29086,39559,42220,43806,53326,57190,57456,62346,114064,115494,124488,126360,138544,146874,149643,163321,166763,168279,173596,176046,177254,
#Deleted in new
chr8_KI270822v1_alt	13290	190624	chr8_KI270822v1_alt:13290-190624	1	+	13458	190514	789624	19	226,80,62,76,77,172,69,72,167,82,93,199,109,184,84,103,157,39,117,	0,10478,29049,39522,42183,43769,53289,57153,57419,62309,114027,115457,124451,126323,138507,146837,149606,176009,177217,
#Deleted in new
chr8_KI270822v1_alt	13331	190624	chr8_KI270822v1_alt:13331-190624	1	+	13458	190514	789624	25	185,80,62,76,77,172,69,72,167,82,137,181,93,199,109,184,84,103,157,39,39,39,39,39,117,	0,10437,29008,39481,42142,43728,53248,57112,57378,62268,79264,103503,113986,115416,124410,126282,138466,146796,149565,163243,166685,168201,173518,175968,177176,
#Deleted in new
chr8_KI270822v1_alt	13455	70472	chr8_KI270822v1_alt:13455-70472	0	+	13458	70472	789624	7	61,80,62,76,77,172,29,	0,10313,28884,39357,42018,43604,56988,
#Deleted in new
chr8_KI270822v1_alt	13638	57089	chr8_KI270822v1_alt:13638-57089	0	+	52834	57089	789624	6	246,80,62,76,77,30,	0,10130,28701,39174,41835,43421,
#Deleted in new
chr8_KI270822v1_alt	23804	129865	chr8_KI270822v1_alt:23804-129865	0	+	23804	23804	8553170	11	44,122,62,76,77,172,69,72,4972,93,1118,	0,11854,18535,29008,31669,33255,42775,46639,46905,103513,104943,
#Deleted in new
chr8_KI270822v1_alt	63220	64384	chr8_KI270822v1_alt:63220-64384	7	-	63220	63220	16724991	1	1164,	0,
#Deleted in new
chr8_KI270822v1_alt	126642	190624	chr8_KI270822v1_alt:126642-190624	0	+	126642	126642	8553170	7	768,199,84,103,157,39,117,	0,2105,25155,33485,36254,62657,63865,
#Deleted in new
chr8_KI270822v1_alt	176574	190626	chr8_KI270822v1_alt:176574-190626	0	+	176574	190514	789624	5	39,39,39,39,119,	0,3442,4958,12725,13933,
#Deleted in new
chr8_KI270822v1_alt	176574	182002	chr8_KI270822v1_alt:176574-182002	0	+	176574	176574	8553170	3	39,39,470,	0,3442,4958,
#Deleted in new
chr8_KI270822v1_alt	215613	216148	chr8_KI270822v1_alt:215613-216148	7	-	215613	215613	16724991	1	535,	0,
#Deleted in new
chr8_KI270822v1_alt	220301	251785	chr8_KI270822v1_alt:220301-251785	7	+	220301	220301	16724991	8	127,80,54,79,77,173,66,184,	0,864,4861,7970,8379,9579,10625,31300,
#Deleted in new
chr8_KI270822v1_alt	220314	251785	chr8_KI270822v1_alt:220314-251785	5	+	220314	220314	16724991	8	114,80,79,77,173,66,123,184,	0,851,7957,8366,9566,10612,29478,31287,
#Deleted in new
chr8_KI270822v1_alt	220342	230992	chr8_KI270822v1_alt:220342-230992	4	+	220342	220342	16724991	6	86,80,79,77,173,66,	0,823,7929,8338,9538,10584,
#Deleted in new
chr8_KI270822v1_alt	220342	229450	chr8_KI270822v1_alt:220342-229450	4	+	220342	220342	16724991	5	86,80,54,79,770,	0,823,4820,7929,8338,
#Deleted in new
chr8_KI270822v1_alt	220373	251785	chr8_KI270822v1_alt:220373-251785	5	+	220373	220373	16724991	7	55,80,54,79,77,173,184,	0,792,4789,7898,8307,9507,31228,
#Deleted in new
chr8_KI270822v1_alt	220373	229949	chr8_KI270822v1_alt:220373-229949	4	+	220373	220373	16724991	4	55,79,77,69,	0,7898,8307,9507,
#Deleted in new
chr8_KI270822v1_alt	220373	230992	chr8_KI270822v1_alt:220373-230992	4	+	220373	220373	16724991	7	55,80,54,79,77,173,66,	0,792,4789,7898,8307,9507,10553,
#Deleted in new
chr8_KI270822v1_alt	220373	230053	chr8_KI270822v1_alt:220373-230053	4	+	220373	220373	16724991	6	55,80,54,79,77,173,	0,792,4789,7898,8307,9507,
#Deleted in new
chr8_KI270822v1_alt	221197	241218	chr8_KI270822v1_alt:221197-241218	4	+	221197	221197	16724991	6	48,54,79,77,173,90,	0,3965,7074,7483,8683,19931,
#Deleted in new
chr8_KI270822v1_alt	228271	241222	chr8_KI270822v1_alt:228271-241222	4	+	228271	228271	16724991	5	79,77,173,66,94,	0,409,1609,2655,12857,
#Deleted in new
chr8_KI270822v1_alt	335122	361373	chr8_KI270822v1_alt:335122-361373	0	+	335256	356958	789624	7	189,77,34,56,79,77,216,	0,787,21234,21813,24548,24991,26035,
#Deleted in new
chr8_KI270822v1_alt	335211	480683	chr8_KI270822v1_alt:335211-480683	3	+	335256	480560	789624	20	100,77,56,79,77,178,66,72,167,82,137,184,96,199,106,190,81,115,160,166,	0,698,21724,24459,24902,25946,44792,52680,52953,53880,60754,63762,79202,83405,92837,95443,108006,122199,139155,145306,
#Deleted in new
chr8_KI270822v1_alt	335214	480684	chr8_KI270822v1_alt:335214-480684	1	+	335256	480560	789624	19	97,77,56,79,77,178,66,167,82,137,184,96,199,106,190,81,115,160,167,	0,695,21721,24456,24899,25943,44789,52950,53877,60751,63759,79199,83402,92834,95440,108003,122196,139152,145303,
#Deleted in new
chr8_KI270822v1_alt	335218	362205	chr8_KI270822v1_alt:335218-362205	1	+	335256	361362	789624	6	93,77,56,79,77,1048,	0,691,21717,24452,24895,25939,
#Deleted in new
chr8_KI270822v1_alt	335256	480588	chr8_KI270822v1_alt:335256-480588	0	+	335256	380007	789624	18	55,77,56,79,77,66,72,167,82,137,96,199,106,190,81,115,160,71,	0,653,21679,24414,24857,44747,52635,52908,53835,60709,79157,83360,92792,95398,107961,122154,139110,145261,
#Deleted in new
chr8_KI270822v1_alt	355255	361373	chr8_KI270822v1_alt:355255-361373	0	+	355255	355255	8553170	5	110,56,79,77,216,	0,1680,4415,4858,5902,
#Deleted in new
chr8_KI270822v1_alt	435747	480682	chr8_KI270822v1_alt:435747-480682	0	+	435747	435747	8553170	5	283,81,115,160,165,	0,7470,21663,38619,44770,
#Deleted in new
chr8_KI270822v1_alt	435791	474577	chr8_KI270822v1_alt:435791-474577	0	+	435791	435791	8553170	4	239,81,115,211,	0,7426,21619,38575,
#Deleted in new
chr8_KI270822v1_alt	494373	588845	chr8_KI270822v1_alt:494373-588845	1	-	495498	588821	789624	20	330,64,160,139,78,184,106,196,99,184,137,82,167,72,169,77,79,56,77,79,	0,1095,2737,5577,5932,11993,17441,23104,23409,25652,33286,43234,44343,44927,77264,77848,81081,90206,93398,94393,
#Deleted in new
chr8_KI270822v1_alt	494373	588846	chr8_KI270822v1_alt:494373-588846	1	-	495498	588821	789624	17	330,64,160,139,78,94,106,196,99,184,137,169,77,79,56,77,80,	0,1095,2737,5577,5932,11993,17441,23104,23409,25652,33286,77264,77848,81081,90206,93398,94393,
#Deleted in new
chr8_KI270822v1_alt	494373	588925	chr8_KI270822v1_alt:494373-588925	3	-	495498	588821	789624	21	330,64,160,139,78,184,106,196,99,184,137,82,167,72,57,169,77,79,56,77,159,	0,1095,2737,5577,5932,11993,17441,23104,23409,25652,33286,43234,44343,44927,65671,77264,77848,81081,90206,93398,94393,
#Deleted in new
chr8_KI270822v1_alt	494376	588925	chr8_KI270822v1_alt:494376-588925	1	-	495498	588821	789624	20	327,64,160,139,77,102,196,99,184,137,82,167,72,57,169,77,79,56,77,159,	0,1092,2734,5574,5929,17442,23101,23406,25649,33283,43231,44340,44924,65668,77261,77845,81078,90203,93395,94390,
#Deleted in new
chr8_KI270822v1_alt	494669	588863	chr8_KI270822v1_alt:494669-588863	1	-	495498	588821	789624	20	34,64,160,139,78,101,196,99,184,137,82,167,72,57,169,77,79,56,77,97,	0,799,2441,5281,5636,17150,22808,23113,25356,32990,42938,44047,44631,65375,76968,77552,80785,89910,93102,94097,
#Deleted in new
chr8_KI270822v1_alt	517478	525337	chr8_KI270822v1_alt:517478-525337	0	-	517478	517478	8553170	4	195,99,184,42,	0,304,2547,7817,
#Deleted in new
chr8_KI270822v1_alt	568536	588845	chr8_KI270822v1_alt:568536-588845	0	-	568536	568536	8553170	7	191,169,77,79,56,77,79,	0,3101,3685,6918,16043,19235,20230,
#Deleted in new
chr8_KI270822v1_alt	610854	611167	chr8_KI270822v1_alt:610854-611167	7	+	610854	610854	16724991	1	313,	0,
#Deleted in new
chr8_KI270822v1_alt	618071	618448	chr8_KI270822v1_alt:618071-618448	7	-	618071	618071	16724991	2	128,58,	0,319,
#Deleted in new
chr8_KI270900v1_alt	112162	317741	chr8_KI270900v1_alt:112162-317741	3	+	159635	310673	789624	12	66,1058,212,148,220,350,42,86,416,92,153,7287,	0,47405,63330,124598,130373,165416,166831,173622,175303,188639,194251,198292,
#Deleted in new
chr8_KI270900v1_alt	112162	317741	chr8_KI270900v1_alt:112162-317741	1	+	159635	310673	789624	11	66,1058,212,148,220,350,86,416,92,153,7287,	0,47405,63330,124598,130373,165416,173622,175303,188639,194251,198292,
#Deleted in new
chr8_KI270900v1_alt	159585	311252	chr8_KI270900v1_alt:159585-311252	1	+	159635	310673	789624	10	1040,212,148,220,350,86,416,92,153,798,	0,15907,77175,82950,117993,126199,127880,141216,146828,150869,
#Deleted in new
chr8_KI270900v1_alt	175318	230263	chr8_KI270900v1_alt:175318-230263	0	-	175318	175318	789624	3	230,195,162,	0,54108,54783,
#Deleted in new
chr8_KI270900v1_alt	214281	232145	chr8_KI270900v1_alt:214281-232145	3	-	214281	214281	8553170	4	193,195,140,1282,	0,15145,15820,16582,
#Deleted in new
chr8_KI270900v1_alt	275101	277850	chr8_KI270900v1_alt:275101-277850	0	+	275101	275101	8553170	2	184,272,	0,2477,
#Deleted in new
chr8_KI270900v1_alt	285788	288015	chr8_KI270900v1_alt:285788-288015	0	+	285788	285788	8553170	2	82,550,	0,1677,
#Deleted in new
chr8_KI270900v1_alt	287551	297696	chr8_KI270900v1_alt:287551-297696	0	+	287551	287551	8553170	4	330,63,139,177,	0,682,2251,9968,
#Deleted in new
chr8_KI270900v1_alt	287622	290101	chr8_KI270900v1_alt:287622-290101	0	+	287622	287622	8553170	3	259,63,299,	0,611,2180,
#Deleted in new
chr8_KI270901v1_alt	19293	45476	chr8_KI270901v1_alt:19293-45476	3	+	19293	19293	8553170	2	147,573,	0,25610,
#Deleted in new
chr8_KI270901v1_alt	106481	118755	chr8_KI270901v1_alt:106481-118755	3	+	106481	106481	8553170	4	200,33,140,166,	0,8544,9362,12108,
#Deleted in new
chr8_KI270901v1_alt	115025	118755	chr8_KI270901v1_alt:115025-118755	0	+	115025	115025	8553170	2	33,163,	0,3567,
#Deleted in new
chr8_KI270901v1_alt	115753	118755	chr8_KI270901v1_alt:115753-118755	0	+	115753	115753	8553170	2	230,166,	0,2836,
#Deleted in new
chr8_KI270926v1_alt	17750	35803	chr8_KI270926v1_alt:17750-35803	3	-	17750	17750	8553170	4	190,195,140,1282,	0,15334,16009,16771,
#Deleted in new
chr8_KI270926v1_alt	33084	33921	chr8_KI270926v1_alt:33084-33921	0	-	33084	33084	8553170	2	195,162,	0,675,
#Deleted in new
chr8_KI270926v1_alt	40123	121138	chr8_KI270926v1_alt:40123-121138	3	+	40123	114068	789624	9	148,220,350,42,86,416,92,153,7289,	0,5953,41058,42472,49262,50943,64274,69627,73726,
#Deleted in new
chr8_KI270926v1_alt	40123	114647	chr8_KI270926v1_alt:40123-114647	0	+	40123	114068	789624	8	148,220,350,86,416,92,153,798,	0,5953,41058,49262,50943,64274,69627,73726,
#Deleted in new
chr8_KI270926v1_alt	78704	81453	chr8_KI270926v1_alt:78704-81453	0	+	78704	78704	8553170	2	184,272,	0,2477,
#Deleted in new
chr8_KI270926v1_alt	89389	91616	chr8_KI270926v1_alt:89389-91616	0	+	89389	91514	789624	2	82,550,	0,1677,
#Deleted in new
chr8_KI270926v1_alt	91152	101286	chr8_KI270926v1_alt:91152-101286	0	+	91152	91152	8553170	4	330,63,139,177,	0,682,2248,9957,
#Deleted in new
chr8_KI270926v1_alt	91223	93693	chr8_KI270926v1_alt:91223-93693	0	+	91223	93555	789624	3	259,63,293,	0,611,2177,
#Deleted in new
chr8_KI270926v1_alt	142865	144114	chr8_KI270926v1_alt:142865-144114	7	+	142865	142865	16724991	2	655,277,	0,972,
#Deleted in new
chr8_KI270926v1_alt	168435	183952	chr8_KI270926v1_alt:168435-183952	0	+	183712	183952	789624	2	305,363,	0,15154,
#Deleted in new
chr8_KI270926v1_alt	168438	172159	chr8_KI270926v1_alt:168438-172159	0	+	168438	168438	8553170	2	302,205,	0,3516,
#Deleted in new
chr8_KI270926v1_alt	168445	172169	chr8_KI270926v1_alt:168445-172169	0	+	168445	168445	8553170	3	295,58,215,	0,2461,3509,
#Deleted in new
chr8_KI270926v1_alt	170865	173105	chr8_KI270926v1_alt:170865-173105	3	-	170865	170865	8553170	1	2240,	0,
#Deleted in new
chr8_KI270926v1_alt	174647	177084	chr8_KI270926v1_alt:174647-177084	3	-	174647	174647	8553170	2	939,126,	0,2311,
#Deleted in new
chr8_KI270926v1_alt	174738	177242	chr8_KI270926v1_alt:174738-177242	0	-	174738	174738	789624	2	848,151,	0,2353,
#Deleted in new
chr8_KI270926v1_alt	175279	175955	chr8_KI270926v1_alt:175279-175955	0	-	175279	175279	8553170	2	307,275,	0,401,
#Deleted in new
chr8_KI270926v1_alt	176419	199228	chr8_KI270926v1_alt:176419-199228	3	+	183712	193225	789624	3	124,666,6321,	0,7170,16488,
#Deleted in new
chr8_KI270926v1_alt	176460	184225	chr8_KI270926v1_alt:176460-184225	0	+	183712	184225	789624	2	123,636,	0,7129,
#Deleted in new
chr8_KI270926v1_alt	185581	193430	chr8_KI270926v1_alt:185581-193430	0	+	185581	185581	8553170	2	62,523,	0,7326,
#Deleted in new
chr8_KI270926v1_alt	186241	193424	chr8_KI270926v1_alt:186241-193424	0	+	186241	186241	8553170	2	318,517,	0,6666,
#Deleted in new
chr8_KV880766v1_fix	48834	49206	chr8_KV880766v1_fix:48834-49206	3	+	48834	49206	8553170	1	372,	0,
#Deleted in new
chr8_KV880766v1_fix	48834	49206	chr8_KV880766v1_fix:48834-49206	1	+	48834	49206	8553170	1	372,	0,
#Deleted in new
chr8_KV880766v1_fix	110302	110410	chr8_KV880766v1_fix:110302-110410	7	-	110302	110302	16724991	1	108,	0,
#Deleted in new
chr8_KZ208914v1_fix	22193	45271	chr8_KZ208914v1_fix:22193-45271	1	+	22360	44821	8553170	13	284,109,137,125,76,62,97,137,282,84,106,70,536,	0,17315,17864,18181,19583,19730,19914,20109,20372,21037,21920,22394,22542,
#Deleted in new
chr8_KZ208914v1_fix	22200	45325	chr8_KZ208914v1_fix:22200-45325	3	+	22360	44933	0	13	277,109,137,125,76,62,97,137,282,106,66,70,598,	0,17308,17857,18174,19576,19723,19907,20102,20365,21913,22248,22387,22527,
#Deleted in new
chr8_KZ208914v1_fix	22207	40197	chr8_KZ208914v1_fix:22207-40197	0	+	22360	23163	8553170	5	270,137,119,109,140,	0,878,1857,17301,17850,
#Deleted in new
chr8_KZ208914v1_fix	23182	41970	chr8_KZ208914v1_fix:23182-41970	0	+	39586	41970	8553170	6	69,107,137,125,76,47,	0,16328,16875,17192,18594,18741,
#Deleted in new
chr8_KZ208914v1_fix	39636	45322	chr8_KZ208914v1_fix:39636-45322	0	+	39636	39636	8553170	10	558,1478,62,97,137,282,106,66,70,595,	0,738,2287,2471,2666,2929,4477,4812,4951,5091,
#Deleted in new
chr8_KZ208914v1_fix	39798	41985	chr8_KZ208914v1_fix:39798-41985	0	+	39798	39798	8553170	4	396,125,76,62,	0,576,1978,2125,
#Deleted in new
chr8_KZ208914v1_fix	39871	40697	chr8_KZ208914v1_fix:39871-40697	0	+	39871	39871	8553170	2	323,323,	0,503,
#Deleted in new
chr8_KZ208914v1_fix	40060	42694	chr8_KZ208914v1_fix:40060-42694	0	+	40060	41939	8553170	6	134,125,62,97,137,129,	0,314,1863,2047,2242,2505,
#Deleted in new
chr8_KZ208914v1_fix	41001	45319	chr8_KZ208914v1_fix:41001-45319	0	+	41001	41001	8553170	8	851,62,97,137,282,106,209,592,	0,922,1106,1301,1564,3112,3447,3726,
#Deleted in new
chr8_KZ208914v1_fix	41656	42213	chr8_KZ208914v1_fix:41656-42213	0	+	41656	41656	8553170	3	196,62,106,	0,267,451,
#Deleted in new
chr8_KZ208914v1_fix	41777	42490	chr8_KZ208914v1_fix:41777-42490	0	+	41777	41777	8553170	3	208,97,188,	0,330,525,
#Deleted in new
chr8_KZ208914v1_fix	42368	44779	chr8_KZ208914v1_fix:42368-44779	0	+	42368	42817	8553170	7	71,103,84,106,66,70,52,	0,376,862,1745,2080,2219,2359,
#Deleted in new
chr8_KZ208914v1_fix	43215	45323	chr8_KZ208914v1_fix:43215-45323	0	+	43215	43215	8553170	3	1004,124,596,	0,1233,1512,
#Deleted in new
chr8_KZ208914v1_fix	43643	44807	chr8_KZ208914v1_fix:43643-44807	0	+	43643	43643	8553170	2	576,359,	0,805,
#Deleted in new
chr8_KZ208914v1_fix	45186	57513	chr8_KZ208914v1_fix:45186-57513	1	-	47156	57239	789624	17	2126,63,88,66,113,45,42,39,104,75,102,106,53,86,41,88,474,	0,2269,2438,2603,2749,2960,3087,3200,3330,3511,3677,3877,4115,4251,4444,6737,11853,
#Deleted in new
chr8_KZ208914v1_fix	45192	45741	chr8_KZ208914v1_fix:45192-45741	3	-	45192	45192	8553170	2	231,213,	0,336,
#Deleted in new
chr8_KZ208914v1_fix	45192	45741	chr8_KZ208914v1_fix:45192-45741	0	-	45192	45192	8553170	2	231,213,	0,336,
#Deleted in new
chr8_KZ208914v1_fix	46922	49327	chr8_KZ208914v1_fix:46922-49327	2	-	46922	46922	8553170	12	390,63,231,113,45,42,39,104,75,102,106,26,	0,533,702,1013,1224,1351,1464,1594,1775,1941,2141,2379,
#Deleted in new
chr8_KZ208914v1_fix	46927	57513	chr8_KZ208914v1_fix:46927-57513	1	-	47178	57239	8553170	10	385,63,75,102,106,53,86,41,88,474,	0,528,697,1936,2136,2374,2510,2703,4996,10112,
#Deleted in new
chr8_KZ208914v1_fix	47445	48236	chr8_KZ208914v1_fix:47445-48236	0	-	47445	47445	8553170	3	73,231,301,	0,179,490,
#Deleted in new
chr8_KZ208914v1_fix	47677	48924	chr8_KZ208914v1_fix:47677-48924	0	-	47677	47677	8553170	7	35,45,42,39,104,75,61,	0,469,596,709,839,1020,1186,
#Deleted in new
chr8_KZ208914v1_fix	47848	47918	chr8_KZ208914v1_fix:47848-47918	3	-	47848	47848	5263520	1	70,	0,
#Deleted in new
chr8_KZ208914v1_fix	48519	57277	chr8_KZ208914v1_fix:48519-57277	0	-	48519	48519	8553170	8	101,268,106,53,86,41,88,238,	0,178,544,782,918,1111,3404,8520,
#Deleted in new
chr8_KZ208914v1_fix	48696	57270	chr8_KZ208914v1_fix:48696-57270	0	-	48696	48696	8553170	6	76,306,53,86,88,231,	0,167,605,741,3227,8343,
#Deleted in new
chr8_KZ208914v1_fix	61167	66884	chr8_KZ208914v1_fix:61167-66884	3	-	63787	66772	789624	2	3552,227,	0,5490,
#Deleted in new
chr8_KZ208914v1_fix	82821	84673	chr8_KZ208914v1_fix:82821-84673	0	-	82821	82821	8553170	2	1645,117,	0,1735,
#Deleted in new
chr8_KZ208914v1_fix	83830	85517	chr8_KZ208914v1_fix:83830-85517	3	-	83950	85370	789624	5	300,86,196,95,298,	0,550,726,1009,1389,
#Deleted in new
chr8_KZ208914v1_fix	83830	86212	chr8_KZ208914v1_fix:83830-86212	3	-	86133	86212	8553170	6	300,86,196,95,151,768,	0,550,726,1009,1389,1614,
#Deleted in new
chr8_KZ208914v1_fix	83916	85448	chr8_KZ208914v1_fix:83916-85448	0	-	83916	85370	789624	4	214,86,196,229,	0,464,640,1303,
#Deleted in new
chr8_KZ208914v1_fix	84737	90303	chr8_KZ208914v1_fix:84737-90303	0	+	89896	90303	8553170	3	177,240,78,	0,5049,5488,
#Deleted in new
chr8_KZ208914v1_fix	85246	89900	chr8_KZ208914v1_fix:85246-89900	0	+	85246	85246	8553170	3	47,352,114,	0,2607,4540,
#Deleted in new
chr8_KZ208914v1_fix	85255	88057	chr8_KZ208914v1_fix:85255-88057	0	+	85255	85255	8553170	2	193,204,	0,2598,
#Deleted in new
chr8_KZ208914v1_fix	86033	88576	chr8_KZ208914v1_fix:86033-88576	0	-	86033	86033	8553170	5	248,247,232,114,1166,	0,537,869,1169,1377,
#Deleted in new
chr8_KZ208914v1_fix	86033	89115	chr8_KZ208914v1_fix:86033-89115	1	-	86133	89050	789624	9	248,247,232,114,108,132,64,159,481,	0,537,869,1169,1377,1559,2008,2197,2601,
#Deleted in new
chr8_KZ208914v1_fix	86033	89075	chr8_KZ208914v1_fix:86033-89075	3	-	86133	89050	789624	9	248,247,232,114,108,132,46,159,441,	0,537,869,1169,1377,1559,2026,2197,2601,
#Deleted in new
chr8_KZ208914v1_fix	86033	89979	chr8_KZ208914v1_fix:86033-89979	0	-	86033	86033	8553170	8	248,247,232,114,108,513,1602,44,	0,537,869,1169,1377,1559,2197,3902,
#Deleted in new
chr8_KZ208914v1_fix	86117	87671	chr8_KZ208914v1_fix:86117-87671	0	-	86117	86117	8553170	5	164,232,114,108,79,	0,785,1085,1293,1475,
#Deleted in new
chr8_KZ208914v1_fix	86690	87473	chr8_KZ208914v1_fix:86690-87473	0	-	86690	86690	8553170	3	127,414,63,	0,212,720,
#Deleted in new
chr8_KZ208914v1_fix	86738	87457	chr8_KZ208914v1_fix:86738-87457	0	-	86738	86738	8553170	4	79,250,114,47,	0,164,464,672,
#Deleted in new
chr8_KZ208914v1_fix	87552	88529	chr8_KZ208914v1_fix:87552-88529	0	-	87552	87552	8553170	2	553,299,	0,678,
#Deleted in new
chr8_KZ208914v1_fix	88032	88783	chr8_KZ208914v1_fix:88032-88783	0	-	88032	88032	8553170	2	357,149,	0,602,
#Deleted in new
chr8_KZ208914v1_fix	89159	91873	chr8_KZ208914v1_fix:89159-91873	3	+	89896	91618	789624	5	54,240,871,124,468,	0,627,1066,2033,2246,
#Deleted in new
chr8_KZ208914v1_fix	89167	91624	chr8_KZ208914v1_fix:89167-91624	1	+	89896	91618	789624	5	336,240,871,124,219,	0,619,1058,2025,2238,
#Deleted in new
chr8_KZ208914v1_fix	89179	91208	chr8_KZ208914v1_fix:89179-91208	0	+	89896	91208	8553170	4	34,240,379,16,	0,607,1538,2013,
#Deleted in new
chr8_KZ208914v1_fix	89183	91873	chr8_KZ208914v1_fix:89183-91873	1	+	89896	91618	789624	5	78,236,871,124,468,	0,607,1042,2009,2222,
#Deleted in new
chr8_KZ208914v1_fix	89195	91889	chr8_KZ208914v1_fix:89195-91889	1	+	89896	91618	789624	5	473,240,871,124,484,	0,591,1030,1997,2210,
#Deleted in new
chr8_KZ208914v1_fix	89195	91875	chr8_KZ208914v1_fix:89195-91875	1	+	89896	91618	789624	5	191,240,871,124,470,	0,591,1030,1997,2210,
#Deleted in new
chr8_KZ208914v1_fix	89195	90612	chr8_KZ208914v1_fix:89195-90612	0	+	89896	90612	8553170	3	308,240,387,	0,591,1030,
#Deleted in new
chr8_KZ208914v1_fix	89197	90502	chr8_KZ208914v1_fix:89197-90502	0	+	89197	89197	8553170	2	829,277,	0,1028,
#Deleted in new
chr8_KZ208914v1_fix	89198	91874	chr8_KZ208914v1_fix:89198-91874	1	+	89896	91611	8553170	3	15,240,469,	0,588,2207,
#Deleted in new
chr8_KZ208914v1_fix	89215	91875	chr8_KZ208914v1_fix:89215-91875	1	+	89896	91618	789624	5	453,240,871,124,470,	0,571,1010,1977,2190,
#Deleted in new
chr8_KZ208914v1_fix	89592	90604	chr8_KZ208914v1_fix:89592-90604	0	+	89592	89592	8553170	3	76,137,379,	0,194,633,
#Deleted in new
chr8_KZ208914v1_fix	89614	91287	chr8_KZ208914v1_fix:89614-91287	0	+	89896	90783	8553170	5	54,240,125,322,95,	0,172,611,1160,1578,
#Deleted in new
chr8_KZ208914v1_fix	103703	121667	chr8_KZ208914v1_fix:103703-121667	0	+	103703	103703	8553170	6	160,83,104,150,76,209,	0,709,6286,9980,17570,17755,
#Deleted in new
chr8_KZ208914v1_fix	104439	122313	chr8_KZ208914v1_fix:104439-122313	0	+	104439	104439	8553170	8	56,104,150,76,196,141,114,131,	0,5550,9244,16834,17024,17297,17524,17743,
#Deleted in new
chr8_KZ208914v1_fix	104644	121879	chr8_KZ208914v1_fix:104644-121879	2	+	104698	113733	8553170	7	66,98,104,150,76,201,143,	0,3351,5345,9039,16629,16814,17092,
#Deleted in new
chr8_KZ208914v1_fix	104648	123845	chr8_KZ208914v1_fix:104648-123845	0	+	104698	121511	8553170	14	62,104,150,76,196,141,114,287,82,79,92,253,117,274,	0,5341,9035,16625,16815,17088,17315,17534,17895,18046,18208,18399,18730,18923,
#Deleted in new
chr8_KZ208914v1_fix	104654	123839	chr8_KZ208914v1_fix:104654-123839	1	+	104698	123677	789624	15	56,104,150,76,201,141,114,132,84,82,79,92,253,117,268,	0,5335,9029,16619,16804,17082,17309,17528,17731,17889,18040,18202,18393,18724,18917,
#Deleted in new
chr8_KZ208914v1_fix	104657	110024	chr8_KZ208914v1_fix:104657-110024	0	+	104657	104657	8553170	3	53,172,35,	0,1411,5332,
#Deleted in new
chr8_KZ208914v1_fix	104663	121487	chr8_KZ208914v1_fix:104663-121487	0	+	104663	104663	8553170	5	47,104,150,74,214,	0,5326,9020,15202,16610,
#Deleted in new
chr8_KZ208914v1_fix	104678	121658	chr8_KZ208914v1_fix:104678-121658	0	+	104698	121281	8553170	6	32,104,150,74,76,195,	0,5311,9005,15187,16595,16785,
#Deleted in new
chr8_KZ208914v1_fix	123831	125019	chr8_KZ208914v1_fix:123831-125019	0	-	123831	123831	8553170	6	137,139,130,278,67,38,	0,223,438,654,1005,1150,
#Deleted in new
chr8_KZ208914v1_fix	123831	125044	chr8_KZ208914v1_fix:123831-125044	1	-	123920	125044	8553170	6	137,139,130,156,48,94,	0,223,438,654,884,1119,
#Deleted in new
chr8_KZ208914v1_fix	123833	139952	chr8_KZ208914v1_fix:123833-139952	1	-	123920	139761	0	38	135,139,130,156,48,67,177,153,142,85,91,117,153,144,90,207,175,137,179,142,114,90,81,75,98,52,123,88,94,111,140,147,152,81,134,28,158,61,	0,221,436,652,882,1003,1148,1413,1651,1867,2034,2204,3117,3367,3609,3976,4256,4512,4723,5071,5294,5548,5727,5897,6045,6221,6357,6550,6761,6935,7123,7440,7693,7980,8199,8415,15784,16058,
#Deleted in new
chr8_KZ208914v1_fix	123920	139891	chr8_KZ208914v1_fix:123920-139891	1	-	123920	139761	0	37	48,139,130,156,48,67,177,153,142,85,91,117,153,144,90,207,175,137,179,142,114,90,81,75,98,52,123,88,94,111,140,147,152,81,134,28,274,	0,134,349,565,795,916,1061,1326,1564,1780,1947,2117,3030,3280,3522,3889,4169,4425,4636,4984,5207,5461,5640,5810,5958,6134,6270,6463,6674,6848,7036,7353,7606,7893,8112,8328,15697,
#Deleted in new
chr8_KZ208914v1_fix	124167	124840	chr8_KZ208914v1_fix:124167-124840	0	-	124167	124167	8553170	2	26,571,	0,102,
#Deleted in new
chr8_KZ208914v1_fix	124301	125319	chr8_KZ208914v1_fix:124301-125319	2	-	124301	124301	8553170	5	98,156,48,322,73,	0,184,414,535,945,
#Deleted in new
chr8_KZ208914v1_fix	124485	125364	chr8_KZ208914v1_fix:124485-125364	0	-	124485	125364	8553170	5	156,48,67,117,118,	0,230,351,496,761,
#Deleted in new
chr8_KZ208914v1_fix	124751	124833	chr8_KZ208914v1_fix:124751-124833	3	-	124751	124751	5263520	1	82,	0,
#Deleted in new
chr8_KZ208914v1_fix	125371	139784	chr8_KZ208914v1_fix:125371-139784	0	-	125566	139761	8553170	6	28,142,81,134,28,167,	0,113,6442,6661,6877,14246,
#Deleted in new
chr8_KZ208914v1_fix	125915	126582	chr8_KZ208914v1_fix:125915-126582	0	-	125915	125915	8553170	2	43,545,	0,122,
#Deleted in new
chr8_KZ208914v1_fix	126617	127333	chr8_KZ208914v1_fix:126617-127333	0	-	126617	126617	8553170	2	486,133,	0,583,
#Deleted in new
chr8_KZ208914v1_fix	129125	129949	chr8_KZ208914v1_fix:129125-129949	0	-	129125	129125	8553170	4	116,90,81,219,	0,256,435,605,
#Deleted in new
chr8_KZ208914v1_fix	129822	130410	chr8_KZ208914v1_fix:129822-130410	0	-	129822	129822	8553170	2	154,356,	0,232,
#Deleted in new
chr8_KZ208914v1_fix	130402	131589	chr8_KZ208914v1_fix:130402-131589	0	-	130402	130402	8553170	5	69,94,328,147,63,	0,192,366,871,1124,
#Deleted in new
chr8_KZ208914v1_fix	130411	132278	chr8_KZ208914v1_fix:130411-132278	0	-	130411	130411	8553170	8	60,285,140,147,152,81,134,30,	0,183,545,862,1115,1402,1621,1837,
#Deleted in new
chr8_KZ208914v1_fix	130688	130768	chr8_KZ208914v1_fix:130688-130768	3	-	130688	130688	5263520	1	80,	0,
#Deleted in new
chr8_KZ208914v1_fix	130879	130948	chr8_KZ208914v1_fix:130879-130948	3	-	130879	130879	5263520	1	69,	0,
#Deleted in new
chr8_KZ208914v1_fix	140094	140579	chr8_KZ208914v1_fix:140094-140579	3	+	140094	140094	8553170	1	485,	0,
#Deleted in new
chr8_KZ208914v1_fix	140344	144174	chr8_KZ208914v1_fix:140344-144174	0	-	140344	140344	8553170	5	180,104,188,153,59,	0,2821,3017,3495,3771,
#Deleted in new
chr8_KZ208914v1_fix	140997	144188	chr8_KZ208914v1_fix:140997-144188	0	-	140997	140997	8553170	3	2552,153,73,	0,2842,3118,
#Deleted in new
chr8_KZ208914v1_fix	143016	144172	chr8_KZ208914v1_fix:143016-144172	0	-	143016	143016	8553170	3	253,188,57,	0,345,1099,
#Deleted in new
chr8_KZ208914v1_fix	143016	147115	chr8_KZ208914v1_fix:143016-147115	1	-	143140	146811	789624	11	253,188,153,55,132,138,173,172,137,193,703,	0,345,823,1099,1336,1544,1848,2311,2560,2813,3396,
#Deleted in new
chr8_KZ208914v1_fix	143016	144189	chr8_KZ208914v1_fix:143016-144189	0	-	143016	143016	8553170	4	253,188,153,74,	0,345,823,1099,
#Deleted in new
chr8_KZ208914v1_fix	143016	147498	chr8_KZ208914v1_fix:143016-147498	3	-	143140	147392	789624	12	253,188,153,55,132,138,173,172,137,193,282,298,	0,345,823,1099,1336,1544,1848,2311,2560,2813,3396,4184,
#Deleted in new
chr8_KZ208914v1_fix	143017	144194	chr8_KZ208914v1_fix:143017-144194	0	-	143017	143017	8553170	3	252,188,355,	0,344,822,
#Deleted in new
chr8_KZ208914v1_fix	143942	144684	chr8_KZ208914v1_fix:143942-144684	0	-	143942	143942	8553170	4	50,55,132,124,	0,173,410,618,
#Deleted in new
chr8_KZ208914v1_fix	145468	147422	chr8_KZ208914v1_fix:145468-147422	0	-	145468	147392	8553170	4	31,137,193,222,	0,108,361,1732,
#Deleted in new
chr8_KZ208914v1_fix	154202	159165	chr8_KZ208914v1_fix:154202-159165	1	-	154406	157547	789624	10	322,92,54,102,106,90,38,29,71,75,	0,440,614,1117,1345,2082,2425,2579,3308,4888,
#Deleted in new
chr8_KZ208914v1_fix	154202	159165	chr8_KZ208914v1_fix:154202-159165	3	-	154488	157547	789624	9	532,54,102,106,90,38,29,71,75,	0,614,1117,1345,2082,2425,2579,3308,4888,
#Deleted in new
chr8_KZ208914v1_fix	154218	157585	chr8_KZ208914v1_fix:154218-157585	1	-	154488	157547	789624	8	516,54,102,106,90,38,29,75,	0,598,1101,1329,2066,2409,2563,3292,
#Deleted in new
chr8_KZ208914v1_fix	154218	157585	chr8_KZ208914v1_fix:154218-157585	0	-	154218	154218	8553170	3	1435,526,75,	0,2066,3292,
#Deleted in new
chr8_KZ208914v1_fix	154218	157585	chr8_KZ208914v1_fix:154218-157585	1	-	154406	157547	789624	9	306,92,54,102,106,90,38,29,75,	0,424,598,1101,1329,2066,2409,2563,3292,
#Deleted in new
chr8_KZ208914v1_fix	154221	157585	chr8_KZ208914v1_fix:154221-157585	0	-	156623	157547	8553170	7	303,92,605,827,189,29,75,	0,421,595,1326,2255,2560,3289,
#Deleted in new
chr8_KZ208914v1_fix	154222	157585	chr8_KZ208914v1_fix:154222-157585	0	-	154222	154222	8553170	5	302,92,605,1263,75,	0,420,594,1325,3288,
#Deleted in new
chr8_KZ208914v1_fix	154223	157585	chr8_KZ208914v1_fix:154223-157585	0	-	154223	154223	8553170	6	511,54,102,106,90,958,	0,593,1096,1324,2061,2404,
#Deleted in new
chr8_KZ208914v1_fix	154232	157585	chr8_KZ208914v1_fix:154232-157585	0	-	156623	157547	8553170	8	292,92,54,102,827,142,29,75,	0,410,584,1087,1315,2291,2549,3278,
#Deleted in new
chr8_KZ208914v1_fix	154273	157600	chr8_KZ208914v1_fix:154273-157600	0	-	154273	154273	8553170	7	251,92,54,1055,38,29,90,	0,369,543,1046,2354,2508,3237,
#Deleted in new
chr8_KZ208914v1_fix	154465	159150	chr8_KZ208914v1_fix:154465-159150	0	-	154465	157547	8553170	10	59,92,54,102,55,90,38,29,71,60,	0,177,351,854,1082,1819,2162,2316,3045,4625,
#Deleted in new
chr8_KZ208914v1_fix	154706	159145	chr8_KZ208914v1_fix:154706-159145	0	-	154706	157547	8553170	9	28,54,102,106,90,38,29,71,55,	0,110,613,841,1578,1921,2075,2804,4384,
#Deleted in new
chr8_KZ208914v1_fix	155566	157896	chr8_KZ208914v1_fix:155566-157896	0	-	155566	155566	8553170	4	36,90,183,386,	0,718,1061,1944,
#Deleted in new
chr8_KZ208914v1_fix	155997	159145	chr8_KZ208914v1_fix:155997-159145	0	-	155997	155997	8553170	5	377,38,29,71,55,	0,630,784,1513,3093,
#Deleted in new
chr8_KZ208914v1_fix	156319	159146	chr8_KZ208914v1_fix:156319-159146	0	-	156319	157547	8553170	5	55,38,29,383,56,	0,308,462,1191,2771,
#Deleted in new
chr8_KZ208914v1_fix	157072	159145	chr8_KZ208914v1_fix:157072-159145	0	-	157072	157072	8553170	2	509,55,	0,2018,
#Deleted in new
chr8_KZ208915v1_fix	10873	12468	chr8_KZ208915v1_fix:10873-12468	3	-	10873	10873	8553170	1	1595,	0,
#Deleted in new
chr8_KZ208915v1_fix	13744	44077	chr8_KZ208915v1_fix:13744-44077	1	-	13744	13744	8553170	5	728,90,644,160,525,	0,1660,2517,8676,29808,
#Deleted in new
chr8_KZ208915v1_fix	15404	103470	chr8_KZ208915v1_fix:15404-103470	0	-	15404	15404	789624	4	90,213,160,60,	0,1288,7016,88006,
#Deleted in new
chr8_KZ208915v1_fix	17393	17490	chr8_KZ208915v1_fix:17393-17490	3	-	17393	17393	5263520	1	97,	0,
#Deleted in new
chr8_KZ208915v1_fix	30111	103449	chr8_KZ208915v1_fix:30111-103449	3	-	30111	30111	8553170	3	578,252,39,	0,35147,73299,
#Deleted in new
chr8_KZ208915v1_fix	30215	103479	chr8_KZ208915v1_fix:30215-103479	0	-	30215	30215	8553170	2	474,69,	0,73195,
#Deleted in new
chr8_KZ208915v1_fix	103626	154936	chr8_KZ208915v1_fix:103626-154936	3	+	103938	152658	789624	8	531,70,116,90,91,159,124,2504,	0,16513,22354,24204,33304,39313,46694,48806,
#Deleted in new
chr8_KZ208915v1_fix	103935	154155	chr8_KZ208915v1_fix:103935-154155	0	+	103938	126028	8553170	7	222,116,90,91,159,124,1723,	0,22045,23895,32995,39004,46385,48497,
#Deleted in new
chr8_KZ208915v1_fix	103962	152965	chr8_KZ208915v1_fix:103962-152965	0	+	103962	152658	8553170	3	195,124,533,	0,46358,48470,
#Deleted in new
chr8_KZ208915v1_fix	104129	126013	chr8_KZ208915v1_fix:104129-126013	0	+	104129	104343	8553170	4	303,62,70,33,	0,621,16010,21851,
#Deleted in new
chr8_KZ208915v1_fix	133645	152456	chr8_KZ208915v1_fix:133645-152456	0	+	133645	133645	8553170	5	175,91,159,124,24,	0,3285,9294,16675,18787,
#Deleted in new
chr8_KZ208915v1_fix	140433	140514	chr8_KZ208915v1_fix:140433-140514	3	+	140433	140433	5263520	1	81,	0,
#Deleted in new
chr8_KZ208915v1_fix	140437	140510	chr8_KZ208915v1_fix:140437-140510	3	-	140437	140437	5263520	1	73,	0,
#Deleted in new
chr8_KZ208915v1_fix	141024	143012	chr8_KZ208915v1_fix:141024-143012	0	+	141024	141024	8553170	2	487,73,	0,1915,
#Deleted in new
chr8_KZ208915v1_fix	142953	152775	chr8_KZ208915v1_fix:142953-152775	0	+	142953	142953	8553170	2	145,343,	0,9479,
#Deleted in new
chr8_KZ208915v1_fix	206472	230757	chr8_KZ208915v1_fix:206472-230757	1	-	206472	230757	789624	7	1139,112,170,210,185,184,58,	0,4606,10659,12312,13956,21509,24227,
#Deleted in new
chr8_KZ208915v1_fix	206472	230757	chr8_KZ208915v1_fix:206472-230757	3	-	206472	230757	8553170	7	1139,112,170,210,185,184,58,	0,4606,10659,12312,13956,21509,24227,
#Deleted in new
chr8_KZ208915v1_fix	230817	237715	chr8_KZ208915v1_fix:230817-237715	1	+	230817	230817	789624	3	64,256,790,	0,412,6108,
#Deleted in new
chr8_KZ208915v1_fix	237168	280505	chr8_KZ208915v1_fix:237168-280505	3	+	237168	237168	8553170	3	57,168,155,	0,2846,43182,
#Deleted in new
chr8_KZ208915v1_fix	265821	273254	chr8_KZ208915v1_fix:265821-273254	3	-	265927	273089	0	2	252,226,	0,7207,
#Deleted in new
chr8_KZ208915v1_fix	319816	321199	chr8_KZ208915v1_fix:319816-321199	3	-	319941	321158	0	2	235,234,	0,1149,
#Deleted in new
chr8_KZ208915v1_fix	323730	325596	chr8_KZ208915v1_fix:323730-325596	3	+	323730	323730	8553170	3	143,124,134,	0,730,1732,
#Deleted in new
chr8_KZ208915v1_fix	330944	333461	chr8_KZ208915v1_fix:330944-333461	3	-	331142	332022	0	3	320,184,113,	0,906,2404,
#Deleted in new
chr8_KZ208915v1_fix	345837	346711	chr8_KZ208915v1_fix:345837-346711	7	-	345837	345837	16724991	2	113,172,	0,702,
#Deleted in new
chr8_KZ208915v1_fix	354398	355271	chr8_KZ208915v1_fix:354398-355271	7	-	354398	354398	16724991	2	113,172,	0,701,
#Deleted in new
chr8_KZ208915v1_fix	363249	364222	chr8_KZ208915v1_fix:363249-364222	7	-	363249	363249	16724991	2	113,175,	0,798,
#Deleted in new
chr8_KZ208915v1_fix	372760	373746	chr8_KZ208915v1_fix:372760-373746	1	-	372881	373746	0	2	231,175,	0,811,
#Deleted in new
chr8_KZ208915v1_fix	372761	375192	chr8_KZ208915v1_fix:372761-375192	3	-	372881	373746	0	3	230,187,68,	0,810,2363,
#Deleted in new
chr8_KZ208915v1_fix	382527	383370	chr8_KZ208915v1_fix:382527-383370	1	-	382527	383370	8553170	2	15,153,	0,690,
#Deleted in new
chr8_KZ208915v1_fix	382527	383370	chr8_KZ208915v1_fix:382527-383370	3	-	382527	383370	8553170	2	15,153,	0,690,
#Deleted in new
chr8_KZ208915v1_fix	392002	392864	chr8_KZ208915v1_fix:392002-392864	1	-	392002	392864	8553170	2	107,175,	0,687,
#Deleted in new
chr8_KZ208915v1_fix	392002	392864	chr8_KZ208915v1_fix:392002-392864	3	-	392002	392864	789624	2	107,175,	0,687,
#Deleted in new
chr8_KZ208915v1_fix	401645	402489	chr8_KZ208915v1_fix:401645-402489	1	-	401645	402489	8553170	2	15,153,	0,691,
#Deleted in new
chr8_KZ208915v1_fix	401645	402489	chr8_KZ208915v1_fix:401645-402489	3	-	401645	402489	8553170	2	15,153,	0,691,
#Deleted in new
chr8_KZ208915v1_fix	410988	413425	chr8_KZ208915v1_fix:410988-413425	3	-	411109	411974	789624	3	231,187,80,	0,811,2357,
#Deleted in new
chr8_KZ208915v1_fix	423764	424613	chr8_KZ208915v1_fix:423764-424613	7	-	423764	423764	16724991	2	88,173,	0,676,
#Deleted in new
chr8_KZ208915v1_fix	433695	434564	chr8_KZ208915v1_fix:433695-434564	7	-	433695	433695	16724991	2	113,172,	0,697,
#Deleted in new
chr8_KZ208915v1_fix	450429	451860	chr8_KZ208915v1_fix:450429-451860	3	-	450556	451823	0	2	240,209,	0,1222,
#Deleted in new
chr8_KZ208915v1_fix	478094	478452	chr8_KZ208915v1_fix:478094-478452	7	+	478094	478094	16724991	1	358,	0,
#Deleted in new
chr8_KZ208915v1_fix	507458	508873	chr8_KZ208915v1_fix:507458-508873	7	-	507458	507458	16724991	3	36,45,102,	0,563,1313,
#Deleted in new
chr8_KZ208915v1_fix	518003	518851	chr8_KZ208915v1_fix:518003-518851	7	+	518003	518003	16724991	1	848,	0,
#Deleted in new
chr8_KZ208915v1_fix	538789	538999	chr8_KZ208915v1_fix:538789-538999	7	-	538789	538789	16724991	1	210,	0,
#Deleted in new
chr8_KZ208915v1_fix	565689	565894	chr8_KZ208915v1_fix:565689-565894	7	+	565689	565689	16724991	1	205,	0,
#Deleted in new
chr8_KZ208915v1_fix	586041	586704	chr8_KZ208915v1_fix:586041-586704	7	-	586041	586041	16724991	1	663,	0,
#Deleted in new
chr8_KZ208915v1_fix	595884	595986	chr8_KZ208915v1_fix:595884-595986	7	+	595884	595884	16724991	1	102,	0,
#Deleted in new
chr8_KZ208915v1_fix	616821	617039	chr8_KZ208915v1_fix:616821-617039	7	-	616821	616821	16724991	1	218,	0,
#Deleted in new
chr8_KZ208915v1_fix	622951	623172	chr8_KZ208915v1_fix:622951-623172	7	-	622951	622951	16724991	1	221,	0,
#Deleted in new
chr8_KZ208915v1_fix	633365	633629	chr8_KZ208915v1_fix:633365-633629	7	-	633365	633365	16724991	1	264,	0,
#Deleted in new
chr8_KZ208915v1_fix	641710	642642	chr8_KZ208915v1_fix:641710-642642	7	-	641710	641710	16724991	1	932,	0,
#Deleted in new
chr8_KZ208915v1_fix	659637	662649	chr8_KZ208915v1_fix:659637-662649	3	+	659637	662649	8553170	4	123,200,109,963,	0,617,1275,2049,
#Deleted in new
chr8_KZ208915v1_fix	674051	674676	chr8_KZ208915v1_fix:674051-674676	7	-	674051	674051	16724991	1	625,	0,
#Deleted in new
chr8_KZ208915v1_fix	676901	679724	chr8_KZ208915v1_fix:676901-679724	3	-	677471	679547	789624	4	1203,68,62,254,	0,1431,1744,2569,
#Deleted in new
chr8_KZ208915v1_fix	692058	694213	chr8_KZ208915v1_fix:692058-694213	7	-	692058	692058	16724991	4	632,67,62,77,	0,950,1260,2078,
#Deleted in new
chr8_KZ208915v1_fix	710044	723507	chr8_KZ208915v1_fix:710044-723507	3	-	710132	723419	789624	2	231,158,	0,13305,
#Deleted in new
chr8_KZ208915v1_fix	718457	720471	chr8_KZ208915v1_fix:718457-720471	1	+	718457	720471	789624	2	261,54,	0,1960,
#Deleted in new
chr8_KZ208915v1_fix	718457	720471	chr8_KZ208915v1_fix:718457-720471	3	+	718457	720471	789624	2	261,54,	0,1960,
#Deleted in new
chr8_KZ208915v1_fix	729758	731683	chr8_KZ208915v1_fix:729758-731683	3	-	729800	731631	789624	3	167,42,122,	0,1416,1803,
#Deleted in new
chr8_KZ208915v1_fix	732969	736745	chr8_KZ208915v1_fix:732969-736745	1	+	732969	736745	8553170	2	49,146,	0,3630,
#Deleted in new
chr8_KZ208915v1_fix	732969	736745	chr8_KZ208915v1_fix:732969-736745	3	+	732969	736745	789624	2	49,146,	0,3630,
#Deleted in new
chr8_KZ208915v1_fix	744281	748990	chr8_KZ208915v1_fix:744281-748990	1	+	744281	748990	8553170	2	58,158,	0,4551,
#Deleted in new
chr8_KZ208915v1_fix	744281	748990	chr8_KZ208915v1_fix:744281-748990	3	+	744281	748990	789624	2	58,158,	0,4551,
#Deleted in new
chr8_KZ208915v1_fix	755844	768469	chr8_KZ208915v1_fix:755844-768469	1	+	755844	768469	8553170	4	61,153,76,19,	0,644,12307,12606,
#Deleted in new
chr8_KZ208915v1_fix	755844	768469	chr8_KZ208915v1_fix:755844-768469	1	+	755844	768469	8553170	4	61,153,76,19,	0,644,12307,12606,
#Deleted in new
chr8_KZ208915v1_fix	755844	771346	chr8_KZ208915v1_fix:755844-771346	3	+	755844	771346	789624	4	61,153,78,32,	0,644,12606,15470,
#Deleted in new
chr8_KZ208915v1_fix	755844	771346	chr8_KZ208915v1_fix:755844-771346	1	+	755844	771346	8553170	4	61,153,78,32,	0,644,12606,15470,
#Deleted in new
chr8_KZ208915v1_fix	789234	790379	chr8_KZ208915v1_fix:789234-790379	1	+	789234	790379	789624	2	58,143,	0,1002,
#Deleted in new
chr8_KZ208915v1_fix	789234	790379	chr8_KZ208915v1_fix:789234-790379	3	+	789234	790379	8553170	2	58,143,	0,1002,
#Deleted in new
chr8_KZ208915v1_fix	798819	800375	chr8_KZ208915v1_fix:798819-800375	7	-	798819	798819	16724991	1	1556,	0,
#Deleted in new
chr8_KZ208915v1_fix	802502	804514	chr8_KZ208915v1_fix:802502-804514	3	+	802538	804413	0	2	94,238,	0,1774,
#Deleted in new
chr8_KZ208915v1_fix	841882	846235	chr8_KZ208915v1_fix:841882-846235	1	-	841882	846235	789624	2	161,58,	0,4295,
#Deleted in new
chr8_KZ208915v1_fix	841882	846235	chr8_KZ208915v1_fix:841882-846235	3	-	841882	846235	789624	2	161,58,	0,4295,
#Deleted in new
chr8_KZ208915v1_fix	858145	861402	chr8_KZ208915v1_fix:858145-861402	1	+	858145	861402	8553170	4	127,96,83,582,	0,904,1535,2675,
#Deleted in new
chr8_KZ208915v1_fix	858145	861402	chr8_KZ208915v1_fix:858145-861402	3	+	858145	861402	789624	4	127,96,83,582,	0,904,1535,2675,
#Deleted in new
chr8_KZ208915v1_fix	876437	877554	chr8_KZ208915v1_fix:876437-877554	7	-	876437	876437	16724991	1	1117,	0,
#Deleted in new
chr8_KZ208915v1_fix	880673	882266	chr8_KZ208915v1_fix:880673-882266	3	-	880673	882266	5263520	1	1593,	0,
#Deleted in new
chr8_KZ208915v1_fix	885399	886992	chr8_KZ208915v1_fix:885399-886992	3	-	885399	886992	5263520	1	1593,	0,
#Deleted in new
chr8_KZ208915v1_fix	899412	906517	chr8_KZ208915v1_fix:899412-906517	7	-	899412	899412	16724991	2	206,58,	0,7047,
#Deleted in new
chr8_KZ208915v1_fix	921336	924347	chr8_KZ208915v1_fix:921336-924347	7	-	921336	921336	16724991	4	963,109,200,123,	0,1627,2194,2888,
#Deleted in new
chr8_KZ208915v1_fix	928958	931969	chr8_KZ208915v1_fix:928958-931969	7	-	928958	928958	16724991	4	963,109,200,123,	0,1627,2194,2888,
#Deleted in new
chr8_KZ208915v1_fix	940728	943739	chr8_KZ208915v1_fix:940728-943739	3	-	940728	943739	8553170	4	963,109,200,123,	0,1627,2194,2888,
#Deleted in new
chr8_KZ208915v1_fix	1091164	1093094	chr8_KZ208915v1_fix:1091164-1093094	7	+	1091164	1091164	16724991	3	121,38,123,	0,1768,1807,
#Deleted in new
chr8_KZ208915v1_fix	1110699	1110870	chr8_KZ208915v1_fix:1110699-1110870	1	-	1110699	1110870	789624	1	171,	0,
#Deleted in new
chr8_KZ208915v1_fix	1110699	1110870	chr8_KZ208915v1_fix:1110699-1110870	3	-	1110699	1110870	789624	1	171,	0,
#Deleted in new
chr8_KZ208915v1_fix	1124466	1125245	chr8_KZ208915v1_fix:1124466-1125245	7	+	1124466	1124466	16724991	2	291,486,	0,293,
#Deleted in new
chr8_KZ208915v1_fix	1138907	1139538	chr8_KZ208915v1_fix:1138907-1139538	7	+	1138907	1138907	16724991	1	631,	0,
#Deleted in new
chr8_KZ208915v1_fix	1151151	1153513	chr8_KZ208915v1_fix:1151151-1153513	1	+	1151151	1153513	8553170	2	96,123,	0,2239,
#Deleted in new
chr8_KZ208915v1_fix	1151151	1151608	chr8_KZ208915v1_fix:1151151-1151608	1	+	1151151	1151608	8553170	2	96,72,	0,385,
#Deleted in new
chr8_KZ208915v1_fix	1151151	1153513	chr8_KZ208915v1_fix:1151151-1153513	3	+	1151151	1153513	8553170	2	96,123,	0,2239,
#Deleted in new
chr8_KZ208915v1_fix	1151151	1151608	chr8_KZ208915v1_fix:1151151-1151608	1	+	1151151	1151608	8553170	2	96,72,	0,385,
#Deleted in new
chr8_KZ208915v1_fix	1188132	1195260	chr8_KZ208915v1_fix:1188132-1195260	7	+	1188132	1188132	16724991	2	59,206,	0,6922,
#Deleted in new
chr8_KZ208915v1_fix	1208210	1209797	chr8_KZ208915v1_fix:1208210-1209797	7	+	1208210	1208210	16724991	1	1587,	0,
#Deleted in new
chr8_KZ208915v1_fix	1212925	1214106	chr8_KZ208915v1_fix:1212925-1214106	7	+	1212925	1212925	16724991	1	1181,	0,
#Deleted in new
chr8_KZ208915v1_fix	1229095	1232350	chr8_KZ208915v1_fix:1229095-1232350	1	-	1229095	1232350	8553170	4	582,83,96,127,	0,1636,2255,3128,
#Deleted in new
chr8_KZ208915v1_fix	1229095	1232350	chr8_KZ208915v1_fix:1229095-1232350	3	-	1229095	1232350	8553170	4	582,83,96,127,	0,1636,2255,3128,
#Deleted in new
chr8_KZ208915v1_fix	1242714	1247073	chr8_KZ208915v1_fix:1242714-1247073	7	+	1242714	1242714	16724991	2	78,162,	0,4197,
#Deleted in new
chr8_KZ208915v1_fix	1254806	1254856	chr8_KZ208915v1_fix:1254806-1254856	7	+	1254806	1254806	16724991	1	50,	0,
#Deleted in new
chr8_KZ208915v1_fix	1270185	1277539	chr8_KZ208915v1_fix:1270185-1277539	3	+	1270185	1277539	789624	2	58,182,	0,7172,
#Deleted in new
chr8_KZ208915v1_fix	1298271	1298436	chr8_KZ208915v1_fix:1298271-1298436	7	+	1298271	1298271	16724991	1	165,	0,
#Deleted in new
chr8_KZ208915v1_fix	1307327	1308294	chr8_KZ208915v1_fix:1307327-1308294	7	+	1307327	1307327	16724991	1	967,	0,
#Deleted in new
chr8_KZ208915v1_fix	1332993	1333211	chr8_KZ208915v1_fix:1332993-1333211	7	+	1332993	1332993	16724991	1	218,	0,
#Deleted in new
chr8_KZ208915v1_fix	1343953	1344636	chr8_KZ208915v1_fix:1343953-1344636	5	+	1343953	1343953	16724991	1	683,	0,
#Deleted in new
chr8_KZ208915v1_fix	1344328	1344482	chr8_KZ208915v1_fix:1344328-1344482	7	+	1344328	1344328	16724991	1	154,	0,
#Deleted in new
chr8_KZ208915v1_fix	1348549	1348931	chr8_KZ208915v1_fix:1348549-1348931	7	-	1348549	1348549	16724991	1	382,	0,
#Deleted in new
chr8_KZ208915v1_fix	1351704	1354844	chr8_KZ208915v1_fix:1351704-1354844	3	+	1351765	1354038	789624	2	119,949,	0,2191,
#Deleted in new
chr8_KZ208915v1_fix	1351704	1354090	chr8_KZ208915v1_fix:1351704-1354090	1	+	1351765	1354038	789624	2	119,195,	0,2191,
#Deleted in new
chr8_KZ208915v1_fix	1363427	1365697	chr8_KZ208915v1_fix:1363427-1365697	3	-	1363427	1365697	789624	2	170,64,	0,2206,
#Deleted in new
chr8_KZ208915v1_fix	1373421	1374084	chr8_KZ208915v1_fix:1373421-1374084	3	+	1373421	1374084	789624	2	55,182,	0,481,
#Deleted in new
chr8_KZ208915v1_fix	1414828	1419435	chr8_KZ208915v1_fix:1414828-1419435	7	+	1414828	1414828	16724991	2	80,953,	0,3654,
#Deleted in new
chr8_KZ208915v1_fix	1418468	1419435	chr8_KZ208915v1_fix:1418468-1419435	5	+	1418468	1418468	16724991	1	967,	0,
#Deleted in new
chr8_KZ208915v1_fix	1451182	1452203	chr8_KZ208915v1_fix:1451182-1452203	7	+	1451182	1451182	16724991	2	109,268,	0,753,
#Deleted in new
chr8_KZ208915v1_fix	1494618	1497210	chr8_KZ208915v1_fix:1494618-1497210	1	+	1494618	1497210	8553170	3	126,86,118,	0,759,2474,
#Deleted in new
chr8_KZ208915v1_fix	1494618	1497210	chr8_KZ208915v1_fix:1494618-1497210	3	+	1494618	1497210	8553170	3	126,86,118,	0,759,2474,
#Deleted in new
chr8_KZ208915v1_fix	1501702	1501940	chr8_KZ208915v1_fix:1501702-1501940	3	+	1501702	1501702	8553170	1	238,	0,
#Deleted in new
chr8_KZ208915v1_fix	1502300	1502966	chr8_KZ208915v1_fix:1502300-1502966	1	+	1502300	1502966	8553170	2	133,95,	0,571,
#Deleted in new
chr8_KZ208915v1_fix	1502300	1502966	chr8_KZ208915v1_fix:1502300-1502966	3	+	1502300	1502966	8553170	2	133,95,	0,571,
#Deleted in new
chr8_KZ208915v1_fix	1509465	1539570	chr8_KZ208915v1_fix:1509465-1539570	1	-	1509465	1539570	789624	7	219,153,177,192,129,184,368,	0,6961,8211,12412,16750,28778,29737,
#Deleted in new
chr8_KZ208915v1_fix	1509465	1545258	chr8_KZ208915v1_fix:1509465-1545258	1	-	1509465	1545258	789624	8	219,153,177,192,129,184,98,99,	0,6961,8211,12412,16750,28778,29737,35694,
#Deleted in new
chr8_KZ208915v1_fix	1509465	1545258	chr8_KZ208915v1_fix:1509465-1545258	3	-	1509465	1545258	789624	8	219,153,177,192,129,184,98,99,	0,6961,8211,12412,16750,28778,29737,35694,
#Deleted in new
chr8_KZ208915v1_fix	1509465	1539570	chr8_KZ208915v1_fix:1509465-1539570	1	-	1509465	1539570	789624	7	219,153,177,192,129,184,368,	0,6961,8211,12412,16750,28778,29737,
#Deleted in new
chr8_KZ208915v1_fix	1538373	1545258	chr8_KZ208915v1_fix:1538373-1545258	1	-	1538373	1545258	8553170	2	54,99,	0,6786,
#Deleted in new
chr8_KZ208915v1_fix	1538373	1545258	chr8_KZ208915v1_fix:1538373-1545258	1	-	1538373	1545258	8553170	2	54,99,	0,6786,
#Deleted in new
chr8_KZ208915v1_fix	1545522	1546393	chr8_KZ208915v1_fix:1545522-1546393	1	+	1545522	1545522	8553170	2	148,323,	0,548,
#Deleted in new
chr8_KZ208915v1_fix	1545578	1550165	chr8_KZ208915v1_fix:1545578-1550165	3	+	1545578	1545578	8553170	2	591,220,	0,4367,
#Deleted in new
chr8_KZ208915v1_fix	1557709	1558091	chr8_KZ208915v1_fix:1557709-1558091	7	-	1557709	1557709	16724991	1	382,	0,
#Deleted in new
chr8_KZ208915v1_fix	1561827	1562058	chr8_KZ208915v1_fix:1561827-1562058	1	-	1561827	1562058	789624	1	231,	0,
#Deleted in new
chr8_KZ208915v1_fix	1561827	1562058	chr8_KZ208915v1_fix:1561827-1562058	3	-	1561827	1562058	789624	1	231,	0,
#Deleted in new
chr8_KZ208915v1_fix	1564853	1576652	chr8_KZ208915v1_fix:1564853-1576652	1	-	1564853	1576652	8553170	2	42,138,	0,11661,
#Deleted in new
chr8_KZ208915v1_fix	1564853	1576652	chr8_KZ208915v1_fix:1564853-1576652	3	-	1564853	1576652	8553170	2	42,138,	0,11661,
#Deleted in new
chr8_KZ208915v1_fix	1585979	1586669	chr8_KZ208915v1_fix:1585979-1586669	1	-	1585979	1586669	789624	1	690,	0,
#Deleted in new
chr8_KZ208915v1_fix	1585979	1586669	chr8_KZ208915v1_fix:1585979-1586669	3	-	1585979	1586669	789624	1	690,	0,
#Deleted in new
chr8_KZ208915v1_fix	1588080	1643882	chr8_KZ208915v1_fix:1588080-1643882	1	-	1589607	1639773	0	7	1710,149,88,126,167,1073,101,	0,2919,4869,9767,10918,51077,55701,
#Deleted in new
chr8_KZ208915v1_fix	1588082	1671110	chr8_KZ208915v1_fix:1588082-1671110	1	-	1589607	1599163	789624	7	1708,149,88,126,170,268,105,	0,2917,4867,9765,10916,59220,82923,
#Deleted in new
chr8_KZ208915v1_fix	1588951	1639773	chr8_KZ208915v1_fix:1588951-1639773	1	-	1589607	1639773	8553170	9	839,149,88,126,167,421,66,111,15,	0,2048,3998,8896,10047,50206,50628,50695,50807,
#Deleted in new
chr8_KZ208915v1_fix	1589317	1591590	chr8_KZ208915v1_fix:1589317-1591590	0	-	1589317	1589317	8553170	2	473,591,	0,1682,
#Deleted in new
chr8_KZ208915v1_fix	1589560	1639853	chr8_KZ208915v1_fix:1589560-1639853	1	-	1589607	1639773	0	6	230,149,88,126,170,696,	0,1439,3389,8287,9438,49597,
#Deleted in new
chr8_KZ208915v1_fix	1591000	1643935	chr8_KZ208915v1_fix:1591000-1643935	0	-	1591000	1599163	8553170	5	148,88,126,170,154,	0,1949,6847,7998,52781,
#Deleted in new
chr8_KZ208915v1_fix	1639423	1643864	chr8_KZ208915v1_fix:1639423-1643864	2	-	1639423	1639773	8553170	3	807,120,83,	0,2629,4358,
#Deleted in new
chr8_KZ208915v1_fix	1639704	1655447	chr8_KZ208915v1_fix:1639704-1655447	0	-	1639704	1639773	8553170	3	526,271,35,	0,7598,15708,
#Deleted in new
chr8_KZ208915v1_fix	1639725	1671109	chr8_KZ208915v1_fix:1639725-1671109	0	-	1639725	1639773	8553170	3	505,268,104,	0,7577,31280,
#Deleted in new
chr8_KZ208915v1_fix	1783421	1795610	chr8_KZ208915v1_fix:1783421-1795610	3	+	1783421	1783421	8553170	9	77,75,89,89,80,67,145,74,1093,	0,5692,6014,6700,8016,8545,8814,10473,11096,
#Deleted in new
chr8_KZ208915v1_fix	1784010	1800028	chr8_KZ208915v1_fix:1784010-1800028	3	-	1784010	1800028	8553170	10	203,132,151,77,180,153,147,104,99,56,	0,995,2655,6051,7251,8603,9198,13825,14965,15962,
#Deleted in new
chr8_KZ208915v1_fix	1784010	1800028	chr8_KZ208915v1_fix:1784010-1800028	1	-	1784010	1800028	789624	10	203,132,151,77,180,153,147,104,99,56,	0,995,2655,6051,7251,8603,9198,13825,14965,15962,
#Deleted in new
chr8_KZ208915v1_fix	1788077	1789634	chr8_KZ208915v1_fix:1788077-1789634	1	+	1788077	1788077	8553170	3	237,75,282,	0,1036,1275,
#Deleted in new
chr8_KZ208915v1_fix	1790077	1791848	chr8_KZ208915v1_fix:1790077-1791848	0	+	1790077	1790077	8553170	2	133,411,	0,1360,
#Deleted in new
chr8_KZ208915v1_fix	1867025	1868891	chr8_KZ208915v1_fix:1867025-1868891	3	+	1867025	1867025	8553170	3	64,209,437,	0,507,1429,
#Deleted in new
chr8_KZ208915v1_fix	1904156	1904429	chr8_KZ208915v1_fix:1904156-1904429	1	+	1904156	1904429	8553170	1	273,	0,
#Deleted in new
chr8_KZ208915v1_fix	1904156	1904429	chr8_KZ208915v1_fix:1904156-1904429	3	+	1904156	1904429	8553170	1	273,	0,
#Deleted in new
chr8_KZ208915v1_fix	1909909	1954379	chr8_KZ208915v1_fix:1909909-1954379	1	-	1909909	1909909	8553170	7	223,171,273,216,162,100,212,	0,448,3556,4523,33902,37439,44258,
#Deleted in new
chr8_KZ208915v1_fix	1909910	1978449	chr8_KZ208915v1_fix:1909910-1978449	3	-	1909910	1909910	5263520	7	222,171,273,216,100,189,51,	0,447,3555,4522,37438,52940,68488,
#Deleted in new
chr8_KZ208915v1_fix	1913566	1958079	chr8_KZ208915v1_fix:1913566-1958079	0	-	1913566	1913566	8553170	4	172,216,100,312,	0,866,33782,44201,
#Deleted in new
chr8_KZ208915v1_fix	1923945	1924200	chr8_KZ208915v1_fix:1923945-1924200	1	+	1923945	1924200	789624	1	255,	0,
#Deleted in new
chr8_KZ208915v1_fix	1923945	1924200	chr8_KZ208915v1_fix:1923945-1924200	3	+	1923945	1924200	789624	1	255,	0,
#Deleted in new
chr8_KZ208915v1_fix	1955985	1956092	chr8_KZ208915v1_fix:1955985-1956092	3	+	1955985	1955985	8553170	1	107,	0,
#Deleted in new
chr8_KZ208915v1_fix	1967176	1967457	chr8_KZ208915v1_fix:1967176-1967457	3	-	1967176	1967176	8553170	1	281,	0,
#Deleted in new
chr8_KZ208915v1_fix	1978398	2007208	chr8_KZ208915v1_fix:1978398-2007208	5	-	1978398	1978398	16724991	9	174,206,270,173,150,71,43,187,83,	0,2664,3463,6645,6917,9168,10274,12161,28727,
#Deleted in new
chr8_KZ208915v1_fix	1980762	1999205	chr8_KZ208915v1_fix:1980762-1999205	4	-	1980762	1980762	16724991	8	506,270,173,71,43,187,110,61,	0,1099,4281,6804,7910,9797,10910,18382,
#Deleted in new
chr8_KZ208915v1_fix	1981049	1983067	chr8_KZ208915v1_fix:1981049-1983067	4	-	1981049	1981049	16724991	3	219,270,316,	0,812,1702,
#Deleted in new
chr8_KZ208915v1_fix	1981128	1990731	chr8_KZ208915v1_fix:1981128-1990731	5	-	1981128	1981128	16724991	8	140,270,91,173,150,71,43,172,	0,733,2749,3915,4187,6438,7544,9431,
#Deleted in new
chr8_KZ208915v1_fix	1981128	1990731	chr8_KZ208915v1_fix:1981128-1990731	6	-	1981128	1981128	16724991	7	140,270,66,173,71,43,172,	0,733,2749,3915,6438,7544,9431,
#Deleted in new
chr8_KZ208915v1_fix	2014636	2015957	chr8_KZ208915v1_fix:2014636-2015957	3	-	2014721	2015738	789624	1	1321,	0,
#Deleted in new
chr8_KZ208915v1_fix	2021418	2030989	chr8_KZ208915v1_fix:2021418-2030989	3	+	2021418	2021418	8553170	2	114,5742,	0,3829,
#Deleted in new
chr8_KZ208915v1_fix	2024062	2029971	chr8_KZ208915v1_fix:2024062-2029971	3	-	2024062	2029971	789624	3	161,152,17,	0,2947,5892,
#Deleted in new
chr8_KZ208915v1_fix	2024062	2029971	chr8_KZ208915v1_fix:2024062-2029971	1	-	2024062	2029971	789624	3	161,152,17,	0,2947,5892,
#Deleted in new
chr8_KZ208915v1_fix	2048936	2061962	chr8_KZ208915v1_fix:2048936-2061962	3	-	2048936	2061962	8553170	3	12,109,182,	0,2610,12844,
#Deleted in new
chr8_KZ208915v1_fix	2048936	2061962	chr8_KZ208915v1_fix:2048936-2061962	1	-	2048936	2061962	8553170	3	12,109,182,	0,2610,12844,
#Deleted in new
chr8_KZ208915v1_fix	2061782	2063351	chr8_KZ208915v1_fix:2061782-2063351	0	+	2061782	2061782	8553170	1	1569,	0,
#Deleted in new
chr8_KZ208915v1_fix	2061782	2063370	chr8_KZ208915v1_fix:2061782-2063370	3	+	2061782	2061782	8553170	1	1588,	0,
#Deleted in new
chr8_KZ208915v1_fix	2064349	2065487	chr8_KZ208915v1_fix:2064349-2065487	7	+	2064349	2064349	16724991	2	156,408,	0,730,
#Deleted in new
chr8_KZ208915v1_fix	2078995	2099243	chr8_KZ208915v1_fix:2078995-2099243	3	+	2078995	2078995	8553170	2	77,164,	0,20084,
#Deleted in new
chr8_KZ208915v1_fix	2090254	2090837	chr8_KZ208915v1_fix:2090254-2090837	7	-	2090254	2090254	16724991	1	583,	0,
#Deleted in new
chr8_KZ208915v1_fix	2143259	2143966	chr8_KZ208915v1_fix:2143259-2143966	3	-	2143259	2143259	8553170	1	707,	0,
#Deleted in new
chr8_KZ208915v1_fix	2145585	2151796	chr8_KZ208915v1_fix:2145585-2151796	1	+	2145585	2151796	8553170	4	102,192,464,97,	0,104,298,6114,
#Deleted in new
chr8_KZ208915v1_fix	2145585	2151796	chr8_KZ208915v1_fix:2145585-2151796	3	+	2145585	2151796	8553170	4	102,192,464,97,	0,104,298,6114,
#Deleted in new
chr8_KZ208915v1_fix	2171330	2171850	chr8_KZ208915v1_fix:2171330-2171850	7	-	2171330	2171330	16724991	1	520,	0,
#Deleted in new
chr8_KZ208915v1_fix	2208296	2210006	chr8_KZ208915v1_fix:2208296-2210006	3	+	2208296	2208296	8553170	1	1710,	0,
#Deleted in new
chr8_KZ208915v1_fix	2220850	2223534	chr8_KZ208915v1_fix:2220850-2223534	3	+	2220850	2220850	8553170	2	304,1437,	0,1247,
#Deleted in new
chr8_KZ208915v1_fix	2237197	2239136	chr8_KZ208915v1_fix:2237197-2239136	3	+	2237197	2237197	8553170	1	1939,	0,
#Deleted in new
chr8_KZ208915v1_fix	2240234	2242248	chr8_KZ208915v1_fix:2240234-2242248	3	+	2240234	2240234	8553170	1	2014,	0,
#Deleted in new
chr8_KZ208915v1_fix	2279930	2284379	chr8_KZ208915v1_fix:2279930-2284379	3	+	2279930	2279930	789624	2	240,399,	0,4050,
#Deleted in new
chr8_KZ208915v1_fix	2311705	2311802	chr8_KZ208915v1_fix:2311705-2311802	3	+	2311705	2311705	5263520	1	97,	0,
#Deleted in new
chr8_KZ208915v1_fix	2422402	2449284	chr8_KZ208915v1_fix:2422402-2449284	1	+	2422402	2449284	8553170	2	196,962,	0,25920,
#Deleted in new
chr8_KZ208915v1_fix	2422402	2449284	chr8_KZ208915v1_fix:2422402-2449284	3	+	2422402	2449284	8553170	2	196,962,	0,25920,
#Deleted in new
chr8_KZ208915v1_fix	2487819	2491171	chr8_KZ208915v1_fix:2487819-2491171	3	+	2487819	2487819	8553170	1	3352,	0,
#Deleted in new
chr8_KZ208915v1_fix	2500763	2506687	chr8_KZ208915v1_fix:2500763-2506687	3	-	2500763	2500763	8553170	3	284,102,53,	0,4765,5871,
#Deleted in new
chr8_KZ208915v1_fix	2507415	2621779	chr8_KZ208915v1_fix:2507415-2621779	3	+	2507506	2621440	789624	6	110,110,93,79,93,1268,	0,5064,6724,7966,13472,113096,
#Deleted in new
chr8_KZ208915v1_fix	2521688	2521759	chr8_KZ208915v1_fix:2521688-2521759	3	+	2521688	2521688	5263520	1	71,	0,
#Deleted in new
chr8_KZ208915v1_fix	2575692	2617600	chr8_KZ208915v1_fix:2575692-2617600	0	-	2575692	2575692	8553170	2	198,53,	0,41855,
#Deleted in new
chr8_KZ208915v1_fix	2582477	2617864	chr8_KZ208915v1_fix:2582477-2617864	3	-	2582477	2582477	8553170	3	387,117,317,	0,10406,35070,
#Deleted in new
chr8_KZ208915v1_fix	2616665	2623410	chr8_KZ208915v1_fix:2616665-2623410	3	+	2616744	2621440	789624	2	317,2899,	0,3846,
#Deleted in new
chr8_KZ208915v1_fix	2646599	2674472	chr8_KZ208915v1_fix:2646599-2674472	3	-	2646721	2674443	789624	4	359,407,193,77,	0,2592,25755,27796,
#Deleted in new
chr8_KZ208915v1_fix	2646602	2674448	chr8_KZ208915v1_fix:2646602-2674448	0	-	2660059	2674443	8553170	5	356,407,192,193,53,	0,2589,13324,25752,27793,
#Deleted in new
chr8_KZ208915v1_fix	2654226	2674438	chr8_KZ208915v1_fix:2654226-2674438	0	-	2656266	2674438	8553170	3	2102,193,43,	0,18128,20169,
#Deleted in new
chr8_KZ208915v1_fix	2657441	2674456	chr8_KZ208915v1_fix:2657441-2674456	0	-	2660059	2674443	8553170	4	1473,192,193,61,	0,2485,14913,16954,
#Deleted in new
chr8_KZ208915v1_fix	2658713	2674456	chr8_KZ208915v1_fix:2658713-2674456	0	-	2658713	2658713	8553170	3	201,193,61,	0,13641,15682,
#Deleted in new
chr8_KZ208915v1_fix	2660510	2660629	chr8_KZ208915v1_fix:2660510-2660629	7	-	2660510	2660510	16724991	1	119,	0,
#Deleted in new
chr8_KZ208915v1_fix	2667198	2674456	chr8_KZ208915v1_fix:2667198-2674456	0	-	2667198	2667198	8553170	4	105,193,170,61,	0,5156,6157,7197,
#Deleted in new
chr8_KZ208915v1_fix	2671359	2672547	chr8_KZ208915v1_fix:2671359-2672547	0	-	2671359	2671359	8553170	2	268,193,	0,995,
#Deleted in new
chr8_KZ208915v1_fix	2680030	2680123	chr8_KZ208915v1_fix:2680030-2680123	3	-	2680030	2680030	5263520	1	93,	0,
#Deleted in new
chr8_KZ208915v1_fix	2723860	2740141	chr8_KZ208915v1_fix:2723860-2740141	1	+	2723860	2740141	789624	3	609,142,6428,	0,6612,9853,
#Deleted in new
chr8_KZ208915v1_fix	2723860	2740141	chr8_KZ208915v1_fix:2723860-2740141	3	+	2723860	2740141	8553170	3	609,142,6428,	0,6612,9853,
#Deleted in new
chr8_KZ208915v1_fix	2773297	2775533	chr8_KZ208915v1_fix:2773297-2775533	1	-	2773297	2775533	8553170	2	83,124,	0,2112,
#Deleted in new
chr8_KZ208915v1_fix	2773297	2775533	chr8_KZ208915v1_fix:2773297-2775533	3	-	2773297	2775533	8553170	2	83,124,	0,2112,
#Deleted in new
chr8_KZ208915v1_fix	2792884	2821501	chr8_KZ208915v1_fix:2792884-2821501	1	-	2793018	2821461	789624	5	224,143,251,193,194,	0,21119,22622,24463,28423,
#Deleted in new
chr8_KZ208915v1_fix	2801853	2817635	chr8_KZ208915v1_fix:2801853-2817635	0	-	2815498	2817635	8553170	5	227,1298,143,418,288,	0,3643,12150,13486,15494,
#Deleted in new
chr8_KZ208915v1_fix	2808233	2821501	chr8_KZ208915v1_fix:2808233-2821501	3	-	2808258	2821461	789624	5	343,143,251,193,194,	0,5770,7273,9114,13074,
#Deleted in new
chr8_KZ208915v1_fix	2857357	2860217	chr8_KZ208915v1_fix:2857357-2860217	3	-	2857357	2857357	8553170	1	2860,	0,
#Deleted in new
chr8_KZ208915v1_fix	2865049	2872444	chr8_KZ208915v1_fix:2865049-2872444	3	-	2865049	2865049	789624	5	114,54,138,172,67,	0,1782,4061,4665,7328,
#Deleted in new
chr8_KZ208915v1_fix	2865557	2869810	chr8_KZ208915v1_fix:2865557-2869810	1	-	2865557	2865557	8553170	4	285,54,138,85,	0,1274,3553,4168,
#Deleted in new
chr8_KZ208915v1_fix	2866037	2869139	chr8_KZ208915v1_fix:2866037-2869139	1	-	2866037	2866037	8553170	3	441,54,29,	0,794,3073,
#Deleted in new
chr8_KZ208915v1_fix	2867603	2870412	chr8_KZ208915v1_fix:2867603-2870412	3	+	2867603	2867603	8553170	3	243,68,1185,	0,865,1624,
#Deleted in new
chr8_KZ208915v1_fix	2867648	2869518	chr8_KZ208915v1_fix:2867648-2869518	0	+	2867648	2867648	8553170	2	198,291,	0,1579,
#Deleted in new
chr8_KZ208915v1_fix	2870679	2870786	chr8_KZ208915v1_fix:2870679-2870786	3	-	2870679	2870679	8553170	1	107,	0,
#Deleted in new
chr8_KZ208915v1_fix	2871963	2872220	chr8_KZ208915v1_fix:2871963-2872220	7	+	2871963	2871963	16724991	1	257,	0,
#Deleted in new
chr8_KZ208915v1_fix	2918136	3294140	chr8_KZ208915v1_fix:2918136-3294140	1	-	2918715	3293891	789624	6	744,107,105,120,69,391,	0,108924,127278,184037,221354,375613,
#Deleted in new
chr8_KZ208915v1_fix	2918138	3252688	chr8_KZ208915v1_fix:2918138-3252688	1	-	2918715	3252384	789624	6	742,107,105,120,69,317,	0,108922,127276,184035,221352,334233,
#Deleted in new
chr8_KZ208915v1_fix	2918142	3252863	chr8_KZ208915v1_fix:2918142-3252863	1	-	2918715	3139503	789624	7	738,107,105,120,69,75,492,	0,108918,127272,184031,221348,333954,334229,
#Deleted in new
chr8_KZ208915v1_fix	2918662	3294038	chr8_KZ208915v1_fix:2918662-3294038	1	-	2918715	3293891	789624	5	218,107,105,69,289,	0,108398,126752,220828,375087,
#Deleted in new
chr8_KZ208915v1_fix	2935499	3020574	chr8_KZ208915v1_fix:2935499-3020574	0	-	2935499	2935499	8553170	2	465,131,	0,84944,
#Deleted in new
chr8_KZ208915v1_fix	2993089	3045518	chr8_KZ208915v1_fix:2993089-3045518	0	-	2993374	3045518	8553170	3	348,107,104,	0,33971,52325,
#Deleted in new
chr8_KZ208915v1_fix	3009218	3293907	chr8_KZ208915v1_fix:3009218-3293907	1	-	3009234	3293891	8553170	6	115,107,105,120,69,158,	0,17842,36196,92955,130272,284531,
#Deleted in new
chr8_KZ208915v1_fix	3009364	3010260	chr8_KZ208915v1_fix:3009364-3010260	7	+	3009364	3009364	16724991	2	192,383,	0,513,
#Deleted in new
chr8_KZ208915v1_fix	3026686	3252688	chr8_KZ208915v1_fix:3026686-3252688	0	-	3026686	3026686	8553170	5	481,105,120,69,317,	0,18728,75487,112804,225685,
#Deleted in new
chr8_KZ208915v1_fix	3027158	3252864	chr8_KZ208915v1_fix:3027158-3252864	0	-	3027158	3139503	8553170	6	9,105,120,69,75,493,	0,18256,75015,112332,224938,225213,
#Deleted in new
chr8_KZ208915v1_fix	3067323	3071562	chr8_KZ208915v1_fix:3067323-3071562	3	+	3067323	3067323	8553170	3	51,373,1152,	0,1397,3087,
#Deleted in new
chr8_KZ208915v1_fix	3096479	3289432	chr8_KZ208915v1_fix:3096479-3289432	3	-	3096927	3139503	8553170	4	495,120,69,130,	0,5694,43011,192823,
#Deleted in new
chr8_KZ208915v1_fix	3200985	3230405	chr8_KZ208915v1_fix:3200985-3230405	3	+	3200985	3200985	8553170	2	459,1582,	0,27838,
#Deleted in new
chr8_KZ208915v1_fix	3443353	3445263	chr8_KZ208915v1_fix:3443353-3445263	1	+	3443353	3443353	8553170	4	208,97,118,293,	0,738,1183,1617,
#Deleted in new
chr8_KZ208915v1_fix	3444513	3445557	chr8_KZ208915v1_fix:3444513-3445557	2	+	3444513	3444513	8553170	3	141,93,311,	0,457,733,
#Deleted in new
chr8_KZ208915v1_fix	3445251	3445336	chr8_KZ208915v1_fix:3445251-3445336	3	+	3445251	3445251	5263520	1	85,	0,
#Deleted in new
chr8_KZ208915v1_fix	3445326	3448660	chr8_KZ208915v1_fix:3445326-3448660	0	+	3445326	3445326	8553170	1	3334,	0,
#Deleted in new
chr8_KZ208915v1_fix	3445394	3448660	chr8_KZ208915v1_fix:3445394-3448660	1	+	3445394	3445394	789624	3	2641,58,223,	0,2717,3043,
#Deleted in new
chr8_KZ208915v1_fix	3447523	3448660	chr8_KZ208915v1_fix:3447523-3448660	0	+	3447523	3447523	8553170	2	646,223,	0,914,
#Deleted in new
chr8_KZ208915v1_fix	3572329	3795529	chr8_KZ208915v1_fix:3572329-3795529	1	-	3572329	3795529	8553170	27	84,157,187,106,75,98,121,83,238,189,110,220,166,146,80,172,79,92,122,187,67,95,84,29,96,225,673,	0,8979,12816,13444,14451,15997,17605,26615,27395,31029,43761,44163,45798,48206,52524,58676,69007,69181,70734,72229,72972,74468,98417,134195,163485,198754,222527,
#Deleted in new
chr8_KZ208915v1_fix	3572329	3795529	chr8_KZ208915v1_fix:3572329-3795529	3	-	3572329	3795529	789624	27	84,157,187,106,75,98,121,83,238,189,110,220,166,146,80,172,79,92,122,187,67,95,84,29,96,225,673,	0,8979,12816,13444,14451,15997,17605,26615,27395,31029,43761,44163,45798,48206,52524,58676,69007,69181,70734,72229,72972,74468,98417,134195,163485,198754,222527,
#Deleted in new
chr8_KZ208915v1_fix	3609805	3609902	chr8_KZ208915v1_fix:3609805-3609902	3	-	3609805	3609805	5263520	1	97,	0,
#Deleted in new
chr8_KZ208915v1_fix	3693118	3693262	chr8_KZ208915v1_fix:3693118-3693262	7	+	3693118	3693118	16724991	1	144,	0,
#Deleted in new
chr8_KZ208915v1_fix	3894070	3897792	chr8_KZ208915v1_fix:3894070-3897792	7	-	3894070	3894070	16724991	4	252,928,595,260,	0,597,2520,3462,
#Deleted in new
chr8_KZ208915v1_fix	3915255	3976633	chr8_KZ208915v1_fix:3915255-3976633	3	+	3915255	3915255	8553170	3	174,129,242,	0,52273,61136,
#Deleted in new
chr8_KZ208915v1_fix	3925930	4025424	chr8_KZ208915v1_fix:3925930-4025424	0	-	3925930	3925930	8553170	4	409,121,58,209,	0,62217,64175,99285,
#Deleted in new
chr8_KZ208915v1_fix	3935515	3971549	chr8_KZ208915v1_fix:3935515-3971549	1	+	3935515	3935515	8553170	4	65,100,129,393,	0,11908,32013,35641,
#Deleted in new
chr8_KZ208915v1_fix	3937577	4025391	chr8_KZ208915v1_fix:3937577-4025391	0	-	3937577	3937577	8553170	6	230,121,83,157,110,176,	0,50570,52528,80947,81429,87638,
#Deleted in new
chr8_KZ208915v1_fix	3937577	3948507	chr8_KZ208915v1_fix:3937577-3948507	1	-	3937577	3937577	8553170	3	230,103,199,	0,9925,10731,
#Deleted in new
chr8_KZ208915v1_fix	3937578	4025446	chr8_KZ208915v1_fix:3937578-4025446	3	-	3937578	3937578	8553170	5	229,262,121,58,231,	0,6008,50569,52527,87637,
#Deleted in new
chr8_KZ208915v1_fix	3937586	3947162	chr8_KZ208915v1_fix:3937586-3947162	0	-	3937586	3937586	8553170	2	221,204,	0,9372,
#Deleted in new
chr8_KZ208915v1_fix	3937741	4101980	chr8_KZ208915v1_fix:3937741-4101980	0	-	3937741	3937741	8553170	4	66,58,402,337,	0,52364,87474,163902,
#Deleted in new
chr8_KZ208915v1_fix	3950768	4025610	chr8_KZ208915v1_fix:3950768-4025610	0	-	3950768	3950768	8553170	4	125,121,58,395,	0,37379,39337,74447,
#Deleted in new
chr8_KZ208915v1_fix	3958822	4025617	chr8_KZ208915v1_fix:3958822-4025617	0	-	3958822	3958822	8553170	2	504,402,	0,66393,
#Deleted in new
chr8_KZ208915v1_fix	3959183	4025684	chr8_KZ208915v1_fix:3959183-4025684	0	-	3959183	3959183	8553170	5	143,121,58,110,469,	0,28964,30922,59823,66032,
#Deleted in new
chr8_KZ208915v1_fix	3959184	4025398	chr8_KZ208915v1_fix:3959184-4025398	0	-	3959184	3959184	8553170	4	142,60,58,183,	0,779,30921,66031,
#Deleted in new
chr8_KZ208915v1_fix	3959184	4026807	chr8_KZ208915v1_fix:3959184-4026807	0	-	3959184	3959184	8553170	7	142,121,58,157,110,402,58,	0,28963,30921,59340,59822,66031,67565,
#Deleted in new
chr8_KZ208915v1_fix	3959184	4025417	chr8_KZ208915v1_fix:3959184-4025417	0	-	3959184	3959184	8553170	5	142,123,121,58,202,	0,2517,28963,30921,66031,
#Deleted in new
chr8_KZ208915v1_fix	3959184	4025640	chr8_KZ208915v1_fix:3959184-4025640	1	-	3959184	3959184	8553170	7	142,60,121,58,157,110,425,	0,779,28963,30921,59340,59822,66031,
#Deleted in new
chr8_KZ208915v1_fix	3959184	4026146	chr8_KZ208915v1_fix:3959184-4026146	0	-	3959184	3959184	8553170	7	142,121,58,157,110,402,30,	0,28963,30921,59340,59822,66031,66932,
#Deleted in new
chr8_KZ208915v1_fix	3959188	4025398	chr8_KZ208915v1_fix:3959188-4025398	0	-	3959188	3959188	8553170	4	138,121,58,183,	0,28959,30917,66027,
#Deleted in new
chr8_KZ208915v1_fix	3961166	4026128	chr8_KZ208915v1_fix:3961166-4026128	0	-	3961166	3961166	8553170	5	658,121,58,402,12,	0,26981,28939,64049,64950,
#Deleted in new
chr8_KZ208915v1_fix	3966642	4025391	chr8_KZ208915v1_fix:3966642-4025391	1	-	3966642	3966642	8553170	5	969,100,70,110,176,	0,1381,51882,52364,58573,
#Deleted in new
chr8_KZ208915v1_fix	3967484	4026128	chr8_KZ208915v1_fix:3967484-4026128	1	-	3967484	3967484	8553170	9	127,100,121,58,73,110,278,34,12,	0,539,20663,22621,51040,51522,57731,58099,58632,
#Deleted in new
chr8_KZ208915v1_fix	3976565	3979561	chr8_KZ208915v1_fix:3976565-3979561	1	+	3976565	3976565	8553170	3	32,252,170,	0,1859,2826,
#Deleted in new
chr8_KZ208915v1_fix	3980335	3980441	chr8_KZ208915v1_fix:3980335-3980441	3	+	3980335	3980335	8553170	1	106,	0,
#Deleted in new
chr8_KZ208915v1_fix	3983637	4025411	chr8_KZ208915v1_fix:3983637-4025411	0	-	3983637	3983637	8553170	4	432,121,58,196,	0,4510,6468,41578,
#Deleted in new
chr8_KZ208915v1_fix	3993086	4000286	chr8_KZ208915v1_fix:3993086-4000286	3	+	3993086	3993086	8553170	3	101,150,312,	0,690,6888,
#Deleted in new
chr8_KZ208915v1_fix	4016438	4026384	chr8_KZ208915v1_fix:4016438-4026384	0	-	4016438	4016438	8553170	3	167,402,268,	0,8777,9678,
#Deleted in new
chr8_KZ208915v1_fix	4016439	4026479	chr8_KZ208915v1_fix:4016439-4026479	1	-	4016439	4016439	789624	3	2677,402,363,	0,8776,9677,
#Deleted in new
chr8_KZ208915v1_fix	4023023	4026283	chr8_KZ208915v1_fix:4023023-4026283	0	-	4023023	4023023	8553170	4	293,278,34,167,	0,2192,2560,3093,
#Deleted in new
chr8_KZ208915v1_fix	4023050	4026128	chr8_KZ208915v1_fix:4023050-4026128	0	-	4023050	4023050	8553170	3	266,402,12,	0,2165,3066,
#Deleted in new
chr8_KZ208915v1_fix	4025542	4102044	chr8_KZ208915v1_fix:4025542-4102044	1	-	4025542	4025542	8553170	3	75,198,401,	0,5916,76101,
#Deleted in new
chr8_KZ208915v1_fix	4046919	4102140	chr8_KZ208915v1_fix:4046919-4102140	0	-	4046919	4046919	8553170	2	300,497,	0,54724,
#Deleted in new
chr8_KZ208915v1_fix	4063984	4064091	chr8_KZ208915v1_fix:4063984-4064091	3	+	4063984	4063984	8553170	1	107,	0,
#Deleted in new
chr8_KZ208915v1_fix	4091343	4096236	chr8_KZ208915v1_fix:4091343-4096236	3	+	4091343	4091343	8553170	2	268,154,	0,4739,
#Deleted in new
chr8_KZ208915v1_fix	4092687	4102241	chr8_KZ208915v1_fix:4092687-4102241	0	-	4092687	4092687	8553170	2	517,598,	0,8956,
#Deleted in new
chr8_KZ208915v1_fix	4095432	4162051	chr8_KZ208915v1_fix:4095432-4162051	1	-	4095432	4095432	8553170	4	1372,128,209,66,	0,3217,18001,66553,
#Deleted in new
chr8_KZ208915v1_fix	4096585	4102167	chr8_KZ208915v1_fix:4096585-4102167	0	-	4096585	4096585	8553170	2	219,524,	0,5058,
#Deleted in new
chr8_KZ208915v1_fix	4118124	4118561	chr8_KZ208915v1_fix:4118124-4118561	7	-	4118124	4118124	16724991	1	437,	0,
#Deleted in new
chr8_KZ208915v1_fix	4147729	4162551	chr8_KZ208915v1_fix:4147729-4162551	1	-	4147729	4147729	8553170	5	340,127,68,239,26,	0,1217,4850,14256,14796,
#Deleted in new
chr8_KZ208915v1_fix	4148445	4162613	chr8_KZ208915v1_fix:4148445-4162613	0	-	4148445	4148445	8553170	4	628,68,239,88,	0,4134,13540,14080,
#Deleted in new
chr8_KZ208915v1_fix	4148547	4153240	chr8_KZ208915v1_fix:4148547-4153240	1	-	4148547	4148547	8553170	2	526,661,	0,4032,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4162224	chr8_KZ208915v1_fix:4148713-4162224	0	-	4148713	4148713	8553170	3	467,68,239,	0,3866,13272,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4162573	chr8_KZ208915v1_fix:4148713-4162573	0	-	4148713	4148713	789624	4	360,68,250,48,	0,3866,13261,13812,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4182485	chr8_KZ208915v1_fix:4148713-4182485	0	-	4148713	4148713	8553170	4	360,68,239,81,	0,3866,13272,33691,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4162551	chr8_KZ208915v1_fix:4148713-4162551	0	-	4148713	4148713	8553170	4	360,68,623,26,	0,3866,8825,13812,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4162573	chr8_KZ208915v1_fix:4148713-4162573	0	-	4148713	4148713	8553170	4	478,68,239,48,	0,3866,13272,13812,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4162595	chr8_KZ208915v1_fix:4148713-4162595	0	-	4148713	4148713	8553170	4	467,68,239,70,	0,3866,13272,13812,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4162573	chr8_KZ208915v1_fix:4148713-4162573	0	-	4148713	4148713	8553170	3	360,250,48,	0,13261,13812,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4161713	chr8_KZ208915v1_fix:4148713-4161713	0	-	4148713	4148713	8553170	3	467,68,50,	0,3866,12950,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4162553	chr8_KZ208915v1_fix:4148713-4162553	0	-	4148713	4148713	8553170	3	360,239,28,	0,13272,13812,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4162526	chr8_KZ208915v1_fix:4148713-4162526	0	-	4148713	4148713	8553170	3	467,68,552,	0,3866,13261,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4162149	chr8_KZ208915v1_fix:4148713-4162149	0	-	4148713	4148713	8553170	4	360,68,30,164,	0,3866,9768,13272,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4162573	chr8_KZ208915v1_fix:4148713-4162573	0	-	4148713	4148713	8553170	4	467,68,250,48,	0,3866,13261,13812,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4162526	chr8_KZ208915v1_fix:4148713-4162526	0	-	4148713	4148713	8553170	3	360,68,541,	0,3866,13272,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4162573	chr8_KZ208915v1_fix:4148713-4162573	1	-	4148713	4148713	8553170	4	467,68,247,48,	0,3866,13261,13812,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4162551	chr8_KZ208915v1_fix:4148713-4162551	0	-	4148713	4148713	8553170	4	467,68,236,26,	0,3866,13272,13812,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4199862	chr8_KZ208915v1_fix:4148713-4199862	1	-	4148713	4148713	8553170	6	360,68,1067,77,153,150,	0,3866,33691,46019,46562,50999,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4162562	chr8_KZ208915v1_fix:4148713-4162562	0	-	4148713	4148713	8553170	5	360,68,623,239,37,	0,3866,8825,13272,13812,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4162526	chr8_KZ208915v1_fix:4148713-4162526	0	-	4148713	4148713	8553170	2	467,541,	0,13272,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4162526	chr8_KZ208915v1_fix:4148713-4162526	0	-	4148713	4148713	8553170	3	360,68,552,	0,3866,13261,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4153240	chr8_KZ208915v1_fix:4148713-4153240	0	-	4148713	4148713	8553170	2	478,661,	0,3866,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4162551	chr8_KZ208915v1_fix:4148713-4162551	0	-	4148713	4148713	8553170	4	478,68,623,26,	0,3866,8825,13812,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4162526	chr8_KZ208915v1_fix:4148713-4162526	0	-	4148713	4148713	8553170	4	478,68,239,82,	0,3866,13272,13731,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4183397	chr8_KZ208915v1_fix:4148713-4183397	0	-	4148713	4148713	8553170	3	360,250,993,	0,13261,33691,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4162595	chr8_KZ208915v1_fix:4148713-4162595	0	-	4148713	4148713	8553170	4	360,68,236,70,	0,3866,13272,13812,
#Deleted in new
chr8_KZ208915v1_fix	4148713	4199845	chr8_KZ208915v1_fix:4148713-4199845	1	-	4148713	4148713	8553170	6	360,68,250,74,153,133,	0,3866,13261,46019,46562,50999,
#Deleted in new
chr8_KZ208915v1_fix	4148717	4182917	chr8_KZ208915v1_fix:4148717-4182917	0	-	4148717	4148717	8553170	3	356,239,513,	0,13268,33687,
#Deleted in new
chr8_KZ208915v1_fix	4148718	4196290	chr8_KZ208915v1_fix:4148718-4196290	0	-	4148718	4148718	8553170	6	355,68,239,77,153,44,	0,3861,13267,46014,46557,47528,
#Deleted in new
chr8_KZ208915v1_fix	4148721	4199934	chr8_KZ208915v1_fix:4148721-4199934	0	-	4148721	4148721	8553170	5	459,68,77,153,222,	0,3858,46011,46554,50991,
#Deleted in new
chr8_KZ208915v1_fix	4148734	4162067	chr8_KZ208915v1_fix:4148734-4162067	1	-	4148734	4148734	8553170	4	339,68,75,82,	0,3845,8804,13251,
#Deleted in new
chr8_KZ208915v1_fix	4148943	4199857	chr8_KZ208915v1_fix:4148943-4199857	1	-	4148943	4148943	8553170	7	237,68,623,239,77,153,145,	0,3636,8595,13042,45789,46332,50769,
#Deleted in new
chr8_KZ208915v1_fix	4152567	4153240	chr8_KZ208915v1_fix:4152567-4153240	0	-	4152567	4152567	8553170	1	673,	0,
#Deleted in new
chr8_KZ208915v1_fix	4157774	4163321	chr8_KZ208915v1_fix:4157774-4163321	0	-	4157774	4157774	8553170	3	387,239,193,	0,4211,5354,
#Deleted in new
chr8_KZ208915v1_fix	4161765	4162548	chr8_KZ208915v1_fix:4161765-4162548	0	-	4161765	4161765	8553170	2	459,23,	0,760,
#Deleted in new
chr8_KZ208915v1_fix	4169052	4171322	chr8_KZ208915v1_fix:4169052-4171322	3	+	4169052	4169052	8553170	2	56,272,	0,1998,
#Deleted in new
chr8_KZ208915v1_fix	4183445	4199837	chr8_KZ208915v1_fix:4183445-4199837	1	-	4183445	4183445	8553170	4	364,153,184,125,	0,11830,12985,16267,
#Deleted in new
chr8_KZ208915v1_fix	4192958	4193517	chr8_KZ208915v1_fix:4192958-4193517	3	-	4192958	4192958	8553170	1	559,	0,
#Deleted in new
chr8_KZ208915v1_fix	4195216	4199887	chr8_KZ208915v1_fix:4195216-4199887	1	-	4195216	4195216	8553170	4	212,111,138,175,	0,1287,2020,4496,
#Deleted in new
chr8_KZ208915v1_fix	4195217	4199829	chr8_KZ208915v1_fix:4195217-4199829	0	-	4195217	4195217	8553170	3	211,111,117,	0,1286,4495,
#Deleted in new
chr8_KZ208915v1_fix	4195220	4196571	chr8_KZ208915v1_fix:4195220-4196571	0	-	4195220	4195220	8553170	2	208,141,	0,1210,
#Deleted in new
chr8_KZ208915v1_fix	4197657	4198029	chr8_KZ208915v1_fix:4197657-4198029	1	-	4197657	4198029	8553170	1	372,	0,
#Deleted in new
chr8_KZ208915v1_fix	4197657	4198029	chr8_KZ208915v1_fix:4197657-4198029	3	-	4197657	4198029	8553170	1	372,	0,
#Deleted in new
chr8_KZ208915v1_fix	4200054	4212067	chr8_KZ208915v1_fix:4200054-4212067	1	+	4209978	4210836	0	2	228,2106,	0,9907,
#Deleted in new
chr8_KZ208915v1_fix	4200932	4215375	chr8_KZ208915v1_fix:4200932-4215375	3	+	4209978	4210836	0	2	134,5414,	0,9029,
#Deleted in new
chr8_KZ208915v1_fix	4206193	4210206	chr8_KZ208915v1_fix:4206193-4210206	3	-	4206193	4206193	8553170	3	185,91,375,	0,3063,3638,
#Deleted in new
chr8_KZ208915v1_fix	4206205	4210108	chr8_KZ208915v1_fix:4206205-4210108	0	-	4206205	4206205	8553170	2	173,277,	0,3626,
#Deleted in new
chr8_KZ208915v1_fix	4260140	4260409	chr8_KZ208915v1_fix:4260140-4260409	3	-	4260140	4260140	8553170	1	269,	0,
#Deleted in new
chr8_KZ208915v1_fix	4279140	4279202	chr8_KZ208915v1_fix:4279140-4279202	3	+	4279140	4279140	8553170	1	62,	0,
#Deleted in new
chr8_KZ208915v1_fix	4303459	4303533	chr8_KZ208915v1_fix:4303459-4303533	3	-	4303459	4303459	5263520	1	74,	0,
#Deleted in new
chr8_KZ208915v1_fix	4343809	4348881	chr8_KZ208915v1_fix:4343809-4348881	1	-	4343809	4348881	8553170	2	180,108,	0,4964,
#Deleted in new
chr8_KZ208915v1_fix	4343809	4348881	chr8_KZ208915v1_fix:4343809-4348881	3	-	4343809	4348881	8553170	2	180,108,	0,4964,
#Deleted in new
chr8_KZ208915v1_fix	4372926	4390042	chr8_KZ208915v1_fix:4372926-4390042	7	-	4372926	4372926	16724991	2	29,634,	0,16482,
#Deleted in new
chr8_KZ208915v1_fix	4388163	4390752	chr8_KZ208915v1_fix:4388163-4390752	5	-	4388163	4388163	16724991	3	571,96,55,	0,1245,2534,
#Deleted in new
chr8_KZ208915v1_fix	4389894	4390195	chr8_KZ208915v1_fix:4389894-4390195	5	-	4389894	4389894	16724991	1	301,	0,
#Deleted in new
chr8_KZ208915v1_fix	4390243	4390377	chr8_KZ208915v1_fix:4390243-4390377	3	-	4390243	4390243	8553170	1	134,	0,
#Deleted in new
chr8_KZ208915v1_fix	4417947	4418233	chr8_KZ208915v1_fix:4417947-4418233	7	+	4417947	4417947	16724991	1	286,	0,
#Deleted in new
chr8_KZ208915v1_fix	4456052	4456158	chr8_KZ208915v1_fix:4456052-4456158	3	-	4456052	4456052	8553170	1	106,	0,
#Deleted in new
chr8_KZ208915v1_fix	4458912	4565972	chr8_KZ208915v1_fix:4458912-4565972	1	+	4458912	4565972	789624	4	2998,24,103,31,	0,49812,95616,107029,
#Deleted in new
chr8_KZ208915v1_fix	4458912	4565972	chr8_KZ208915v1_fix:4458912-4565972	3	+	4458912	4565972	8553170	4	2998,24,103,31,	0,49812,95616,107029,
#Deleted in new
chr8_KZ208915v1_fix	4569516	4628432	chr8_KZ208915v1_fix:4569516-4628432	3	+	4569516	4569516	8553170	4	374,141,109,42,	0,25308,28516,58874,
#Deleted in new
chr8_KZ208915v1_fix	4570560	4600767	chr8_KZ208915v1_fix:4570560-4600767	1	+	4570560	4570560	8553170	3	134,141,125,	0,24264,30082,
#Deleted in new
chr8_KZ208915v1_fix	4632588	4638070	chr8_KZ208915v1_fix:4632588-4638070	7	+	4632588	4632588	16724991	5	126,208,205,200,236,	0,694,3915,4540,5246,
#Deleted in new
chr8_KZ208915v1_fix	4648020	4650189	chr8_KZ208915v1_fix:4648020-4650189	3	-	4648849	4649728	789624	1	2169,	0,
#Deleted in new
chr8_KZ208915v1_fix	4769465	4769769	chr8_KZ208915v1_fix:4769465-4769769	3	+	4769465	4769465	8553170	1	304,	0,
#Deleted in new
chr8_KZ208915v1_fix	4790000	4792233	chr8_KZ208915v1_fix:4790000-4792233	3	-	4790000	4790000	8553170	3	292,137,150,	0,787,2083,
#Deleted in new
chr8_KZ208915v1_fix	4791159	4796382	chr8_KZ208915v1_fix:4791159-4796382	3	+	4791159	4791159	8553170	2	46,351,	0,4872,
#Deleted in new
chr8_KZ208915v1_fix	4890779	4895209	chr8_KZ208915v1_fix:4890779-4895209	3	+	4890779	4890779	8553170	3	218,118,174,	0,2812,4256,
#Deleted in new
chr8_KZ208915v1_fix	5102999	5119270	chr8_KZ208915v1_fix:5102999-5119270	7	-	5102999	5102999	16724991	9	281,224,150,268,134,102,81,63,106,	0,543,7590,8566,8916,10281,11991,13960,16165,
#Deleted in new
chr8_KZ208915v1_fix	5103001	5107496	chr8_KZ208915v1_fix:5103001-5107496	4	-	5103001	5103001	16724991	2	765,2064,	0,2431,
#Deleted in new
chr8_KZ208915v1_fix	5103197	5110191	chr8_KZ208915v1_fix:5103197-5110191	5	+	5103197	5103197	16724991	7	208,140,79,121,60,111,46,	0,1741,3267,4118,5113,6366,6948,
#Deleted in new
chr8_KZ208915v1_fix	5103371	5107641	chr8_KZ208915v1_fix:5103371-5107641	4	+	5103371	5103371	16724991	6	34,48,140,79,121,128,	0,453,1567,3093,3944,4142,
#Deleted in new
chr8_KZ208915v1_fix	5103568	5111654	chr8_KZ208915v1_fix:5103568-5111654	4	-	5103568	5103568	16724991	4	198,140,150,89,	0,2616,7021,7997,
#Deleted in new
chr8_KZ208915v1_fix	5103679	5106590	chr8_KZ208915v1_fix:5103679-5106590	4	-	5103679	5103679	16724991	2	87,406,	0,2505,
#Deleted in new
chr8_KZ208915v1_fix	5103702	5106237	chr8_KZ208915v1_fix:5103702-5106237	4	-	5103702	5103702	16724991	2	64,335,	0,2200,
#Deleted in new
chr8_KZ208915v1_fix	5106453	5109691	chr8_KZ208915v1_fix:5106453-5109691	5	+	5106453	5106453	16724991	5	116,111,108,84,165,	0,863,1098,1835,3073,
#Deleted in new
chr8_KZ208915v1_fix	5107834	5119265	chr8_KZ208915v1_fix:5107834-5119265	4	-	5107834	5107834	16724991	6	404,150,134,81,63,198,	0,2755,4081,7156,9125,11233,
#Deleted in new
chr8_KZ208915v1_fix	5108938	5110657	chr8_KZ208915v1_fix:5108938-5110657	4	-	5108938	5108938	16724991	2	634,68,	0,1651,
#Deleted in new
chr8_KZ208915v1_fix	5109514	5111862	chr8_KZ208915v1_fix:5109514-5111862	7	+	5109514	5109514	16724991	2	160,361,	0,1987,
#Deleted in new
chr8_KZ208915v1_fix	5110623	5119260	chr8_KZ208915v1_fix:5110623-5119260	5	-	5110623	5110623	16724991	7	114,266,132,102,81,63,96,	0,943,1294,2657,4367,6336,8541,
#Deleted in new
chr8_KZ208915v1_fix	5158672	5159333	chr8_KZ208915v1_fix:5158672-5159333	3	+	5158672	5158672	8553170	1	661,	0,
#Deleted in new
chr8_KZ208915v1_fix	5176840	5178768	chr8_KZ208915v1_fix:5176840-5178768	7	-	5176840	5176840	16724991	3	123,38,121,	0,124,1807,
#Deleted in new
chr8_KZ208915v1_fix	5294064	5294413	chr8_KZ208915v1_fix:5294064-5294413	7	-	5294064	5294064	16724991	1	349,	0,
#Deleted in new
chr8_KZ208915v1_fix	5320310	5323321	chr8_KZ208915v1_fix:5320310-5323321	3	+	5320310	5323321	8553170	4	123,200,109,963,	0,617,1275,2048,
#Deleted in new
chr8_KZ208915v1_fix	5408964	5412971	chr8_KZ208915v1_fix:5408964-5412971	3	-	5409052	5412883	789624	2	231,158,	0,3849,
#Deleted in new
chr8_KZ208915v1_fix	5419264	5421092	chr8_KZ208915v1_fix:5419264-5421092	1	-	5419264	5421092	789624	3	122,42,70,	0,1371,1758,
#Deleted in new
chr8_KZ208915v1_fix	5419264	5421092	chr8_KZ208915v1_fix:5419264-5421092	3	-	5419264	5421092	789624	3	122,42,70,	0,1371,1758,
#Deleted in new
chr8_KZ208915v1_fix	5422430	5426244	chr8_KZ208915v1_fix:5422430-5426244	1	+	5422430	5426244	0	2	49,146,	0,3668,
#Deleted in new
chr8_KZ208915v1_fix	5422430	5426244	chr8_KZ208915v1_fix:5422430-5426244	3	+	5422430	5426244	789624	2	49,146,	0,3668,
#Deleted in new
chr8_KZ208915v1_fix	5433777	5438485	chr8_KZ208915v1_fix:5433777-5438485	1	+	5433777	5438485	8553170	2	58,158,	0,4550,
#Deleted in new
chr8_KZ208915v1_fix	5433777	5438485	chr8_KZ208915v1_fix:5433777-5438485	3	+	5433777	5438485	789624	2	58,158,	0,4550,
#Deleted in new
chr8_KZ208915v1_fix	5478490	5479952	chr8_KZ208915v1_fix:5478490-5479952	3	+	5478708	5479856	0	2	276,242,	0,1220,
#Deleted in new
chr8_KZ208915v1_fix	5488290	5489843	chr8_KZ208915v1_fix:5488290-5489843	7	-	5488290	5488290	16724991	1	1553,	0,
#Deleted in new
chr8_KZ208915v1_fix	5491915	5493994	chr8_KZ208915v1_fix:5491915-5493994	3	+	5491999	5493893	0	2	142,238,	0,1841,
#Deleted in new
chr8_KZ208915v1_fix	5531362	5535722	chr8_KZ208915v1_fix:5531362-5535722	1	-	5531362	5535722	8553170	2	161,58,	0,4302,
#Deleted in new
chr8_KZ208915v1_fix	5531362	5535722	chr8_KZ208915v1_fix:5531362-5535722	3	-	5531362	5535722	8553170	2	161,58,	0,4302,
#Deleted in new
chr8_KZ208915v1_fix	5547580	5550837	chr8_KZ208915v1_fix:5547580-5550837	1	+	5547580	5550837	8553170	4	127,96,83,582,	0,904,1535,2675,
#Deleted in new
chr8_KZ208915v1_fix	5547580	5550837	chr8_KZ208915v1_fix:5547580-5550837	3	+	5547580	5550837	789624	4	127,96,83,582,	0,904,1535,2675,
#Deleted in new
chr8_KZ208915v1_fix	5565791	5566983	chr8_KZ208915v1_fix:5565791-5566983	7	-	5565791	5565791	16724991	1	1192,	0,
#Deleted in new
chr8_KZ208915v1_fix	5570103	5572125	chr8_KZ208915v1_fix:5570103-5572125	3	-	5570103	5571696	8553170	1	2022,	0,
#Deleted in new
chr8_KZ208915v1_fix	5574834	5576744	chr8_KZ208915v1_fix:5574834-5576744	3	-	5574834	5576427	5263520	1	1910,	0,
#Deleted in new
chr8_KZ208915v1_fix	5588564	5588804	chr8_KZ208915v1_fix:5588564-5588804	7	-	5588564	5588564	16724991	1	240,	0,
#Deleted in new
chr8_KZ208915v1_fix	5621158	5631606	chr8_KZ208915v1_fix:5621158-5631606	1	-	5621158	5631606	789624	8	98,150,266,134,102,81,63,96,	0,1761,2737,3085,4453,6185,8156,10352,
#Deleted in new
chr8_KZ208915v1_fix	5621158	5631606	chr8_KZ208915v1_fix:5621158-5631606	3	-	5621158	5631606	8553170	8	98,150,266,134,102,81,63,96,	0,1761,2737,3085,4453,6185,8156,10352,
#Deleted in new
chr8_KZ208915v1_fix	5658088	5658620	chr8_KZ208915v1_fix:5658088-5658620	7	-	5658088	5658088	16724991	2	249,279,	0,253,
#Deleted in new
chr8_KZ208915v1_fix	5672207	5672378	chr8_KZ208915v1_fix:5672207-5672378	1	+	5672207	5672378	789624	1	171,	0,
#Deleted in new
chr8_KZ208915v1_fix	5672207	5672378	chr8_KZ208915v1_fix:5672207-5672378	3	+	5672207	5672378	789624	1	171,	0,
#Deleted in new
chr8_KZ208915v1_fix	5765751	5766532	chr8_KZ208915v1_fix:5765751-5766532	7	-	5765751	5765751	16724991	1	781,	0,
#Deleted in new
chr8_KZ208915v1_fix	5775679	5776456	chr8_KZ208915v1_fix:5775679-5776456	7	+	5775679	5775679	16724991	2	108,78,	0,699,
#Deleted in new
chr8_KZ208915v1_fix	5796570	5796789	chr8_KZ208915v1_fix:5796570-5796789	7	-	5796570	5796570	16724991	1	219,	0,
#Deleted in new
chr8_KZ208915v1_fix	5802704	5802923	chr8_KZ208915v1_fix:5802704-5802923	7	-	5802704	5802704	16724991	1	219,	0,
#Deleted in new
chr8_KZ208915v1_fix	5823885	5824666	chr8_KZ208915v1_fix:5823885-5824666	7	-	5823885	5823885	16724991	1	781,	0,
#Deleted in new
chr8_KZ208915v1_fix	5833838	5834013	chr8_KZ208915v1_fix:5833838-5834013	7	+	5833838	5833838	16724991	1	175,	0,
#Deleted in new
chr8_KZ208915v1_fix	5854837	5855056	chr8_KZ208915v1_fix:5854837-5855056	7	-	5854837	5854837	16724991	1	219,	0,
#Deleted in new
chr8_KZ208915v1_fix	5879512	5880512	chr8_KZ208915v1_fix:5879512-5880512	7	-	5879512	5879512	16724991	1	1000,	0,
#Deleted in new
chr8_KZ208915v1_fix	5891665	5892632	chr8_KZ208915v1_fix:5891665-5892632	7	-	5891665	5891665	16724991	1	967,	0,
#Deleted in new
chr8_KZ208915v1_fix	5898413	5899404	chr8_KZ208915v1_fix:5898413-5899404	7	-	5898413	5898413	16724991	1	991,	0,
#Deleted in new
chr8_KZ208915v1_fix	5914485	5914544	chr8_KZ208915v1_fix:5914485-5914544	3	+	5914485	5914485	5263520	1	59,	0,
#Deleted in new
chr8_KZ208915v1_fix	5917240	5950853	chr8_KZ208915v1_fix:5917240-5950853	1	-	5918442	5950783	789624	12	1361,153,163,159,122,115,97,241,150,123,119,791,	0,3833,7011,7284,9846,13395,14810,15009,16104,18983,21273,32822,
#Deleted in new
chr8_KZ208915v1_fix	5917252	5938593	chr8_KZ208915v1_fix:5917252-5938593	0	-	5932441	5933386	8553170	12	1349,153,163,159,122,115,97,241,89,150,123,80,	0,3821,6999,7272,9834,13383,14798,14997,15369,16092,18971,21261,
#Deleted in new
chr8_KZ208915v1_fix	5918104	5921345	chr8_KZ208915v1_fix:5918104-5921345	0	-	5918104	5918104	8553170	2	497,272,	0,2969,
#Deleted in new
chr8_KZ208915v1_fix	5918290	5924738	chr8_KZ208915v1_fix:5918290-5924738	1	-	5918442	5924649	8553170	4	311,153,163,214,	0,2783,5961,6234,
#Deleted in new
chr8_KZ208915v1_fix	5918317	5949705	chr8_KZ208915v1_fix:5918317-5949705	3	-	5918442	5933386	8553170	12	284,153,163,159,122,115,97,241,150,123,119,1317,	0,2756,5934,6207,8769,12318,13733,13932,15027,17906,20196,30071,
#Deleted in new
chr8_KZ208915v1_fix	5918327	5932445	chr8_KZ208915v1_fix:5918327-5932445	0	-	5918442	5932445	8553170	8	274,153,163,159,122,115,64,196,	0,2746,5924,6197,8759,12308,13723,13922,
#Deleted in new
chr8_KZ208915v1_fix	5922579	5922652	chr8_KZ208915v1_fix:5922579-5922652	3	-	5922579	5922579	5263520	1	73,	0,
#Deleted in new
chr8_KZ208915v1_fix	5922584	5922647	chr8_KZ208915v1_fix:5922584-5922647	3	+	5922584	5922584	5263520	1	63,	0,
#Deleted in new
chr8_KZ208915v1_fix	5924524	5930976	chr8_KZ208915v1_fix:5924524-5930976	0	-	5924524	5924524	8553170	3	159,122,341,	0,2562,6111,
#Deleted in new
chr8_KZ208915v1_fix	5932048	5934116	chr8_KZ208915v1_fix:5932048-5934116	0	-	5932441	5933386	8553170	5	66,241,89,150,133,	0,201,573,1296,1935,
#Deleted in new
chr8_KZ208915v1_fix	5933378	5951436	chr8_KZ208915v1_fix:5933378-5951436	0	-	5933378	5933378	8553170	4	116,123,119,150,	0,2845,5135,17908,
#Deleted in new
chr8_KZ208915v1_fix	5961186	6006851	chr8_KZ208915v1_fix:5961186-6006851	3	-	5961186	5961186	8553170	5	747,185,103,113,99,	0,1881,12432,22512,45566,
#Deleted in new
chr8_KZ208915v1_fix	5961399	5983823	chr8_KZ208915v1_fix:5961399-5983823	0	-	5961399	5961399	789624	3	534,103,125,	0,12219,22299,
#Deleted in new
chr8_KZ208915v1_fix	5989609	6013667	chr8_KZ208915v1_fix:5989609-6013667	3	+	5989609	5989609	789624	2	175,329,	0,23729,
#Deleted in new
chr8_KZ208915v1_fix	6153823	6157633	chr8_KZ208915v1_fix:6153823-6157633	7	+	6153823	6153823	16724991	3	391,553,474,	0,1540,3336,
#Deleted in new
chr8_KZ208915v1_fix	6201610	6217462	chr8_KZ208915v1_fix:6201610-6217462	1	+	6201610	6217462	8553170	3	154,174,1034,	0,6481,14818,
#Deleted in new
chr8_KZ208915v1_fix	6201610	6217462	chr8_KZ208915v1_fix:6201610-6217462	3	+	6201610	6217462	789624	3	154,174,1034,	0,6481,14818,
#Deleted in new
chr8_KZ208915v1_fix	6239796	6239903	chr8_KZ208915v1_fix:6239796-6239903	3	+	6239796	6239796	8553170	1	107,	0,
#Deleted in new
chr8_KZ208915v1_fix	6355800	6355902	chr8_KZ208915v1_fix:6355800-6355902	3	+	6355800	6355800	8553170	1	102,	0,
#Deleted in new
chr8_KZ559107v1_alt	4066	5768	chr8_KZ559107v1_alt:4066-5768	7	+	4066	4066	16724991	3	564,221,337,	0,1047,1365,
#Deleted in new
chr8_KZ559107v1_alt	32547	71261	chr8_KZ559107v1_alt:32547-71261	1	-	32852	61960	789624	14	545,74,130,140,27,30,42,123,45,106,166,184,224,878,	0,1256,1794,2235,3346,3666,3910,4502,12352,14451,17453,27927,29193,37836,
#Deleted in new
chr8_KZ559107v1_alt	32547	37238	chr8_KZ559107v1_alt:32547-37238	0	-	32547	32547	8553170	8	545,74,130,140,27,30,42,189,	0,1256,1794,2235,3346,3666,3910,4502,
#Deleted in new
chr8_KZ559107v1_alt	32548	61960	chr8_KZ559107v1_alt:32548-61960	3	-	32852	61960	789624	13	544,74,130,140,27,30,42,123,45,106,166,184,220,	0,1255,1793,2234,3345,3665,3909,4501,12351,14450,17452,27926,29192,
#Deleted in new
chr8_KZ559107v1_alt	36059	37109	chr8_KZ559107v1_alt:36059-37109	0	-	36059	36059	8553170	3	184,42,60,	0,398,990,
#Deleted in new
chr9	12133	13783	chr9:12133-13783	7	+	12133	12133	16724991	6	57,50,109,70,150,218,	0,157,592,954,1204,1432,
#Partially deleted in new
chr9	14520	29739	chr9:14520-29739	3	-	14806	24999	789624	11	420,69,153,159,202,136,137,147,112,154,138,	0,560,1388,2197,2444,2823,3198,3507,3860,10330,15081,
#Partially deleted in new
chr9	24891	73865	chr9:24891-73865	0	-	24891	24999	789624	4	113,97,163,183,	0,20516,27560,48791,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	27656	30891	chr9:27656-30891	3	+	27656	27656	8553170	2	2789,134,	0,3101,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	30143	30281	chr9:30143-30281	3	+	30143	30143	5263520	1	138,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	34393	35860	chr9:34393-35860	1	-	34393	34393	789624	3	564,205,357,	0,666,1110,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	34487	37269	chr9:34487-37269	2	-	34487	34487	8553170	3	470,205,80,	0,572,2702,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	34964	35871	chr9:34964-35871	0	-	34964	34964	8553170	2	300,368,	0,539,
#Partially deleted in new
chr9	52451	73374	chr9:52451-73374	7	-	52451	52451	16724991	2	163,231,	0,20692,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	72673	87667	chr9:72673-87667	3	+	72673	72673	8553170	4	143,193,157,384,	0,6671,7977,14610,
#Deleted in new
chr9	72674	75293	chr9:72674-75293	0	+	72674	72674	789624	2	142,412,	0,2207,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	72690	88826	chr9:72690-88826	0	+	72690	72690	789624	3	126,193,85,	0,6654,16051,
#Deleted in new
chr9	72704	75327	chr9:72704-75327	1	+	72704	72704	789624	3	112,57,446,	0,1444,2177,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	72726	87739	chr9:72726-87739	0	+	72726	72726	8553170	3	90,193,456,	0,6618,14557,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	74138	87590	chr9:74138-87590	0	+	74138	74138	8553170	3	67,193,307,	0,5206,13145,
#Deleted in new
chr9	87660	88775	chr9:87660-88775	0	+	87660	87660	8553170	2	535,34,	0,1081,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	100803	102850	chr9:100803-102850	0	-	100803	100803	8553170	2	501,111,	0,1936,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	100993	102941	chr9:100993-102941	3	-	100993	100993	8553170	3	311,69,202,	0,1479,1746,
#Deleted in new
chr9	112712	113754	chr9:112712-113754	3	-	112712	112712	8553170	2	355,61,	0,981,
#Deleted in new
chr9	116230	118204	chr9:116230-118204	3	-	116799	118119	789624	1	1974,	0,
#Partially deleted in new
chr9	121037	179058	chr9:121037-179058	1	-	121466	178969	789624	15	536,130,66,69,52,57,45,87,47,38,60,92,97,87,243,	0,923,2179,2348,13941,25064,30996,33671,35443,41394,42940,51043,52232,54660,57778,
#Partially deleted in new
chr9	121040	179147	chr9:121040-179147	3	-	121466	178969	789624	15	533,130,66,69,52,57,45,87,47,38,60,92,97,87,332,	0,920,2176,2345,13938,25061,30993,33668,35440,41391,42937,51040,52229,54657,57775,
#Partially deleted in new
chr9	121051	146140	chr9:121051-146140	0	-	123162	146140	789624	4	2231,69,52,39,	0,2334,13927,25050,
#Partially deleted in new
chr9	121057	164009	chr9:121057-164009	0	-	161639	164009	789624	12	516,130,66,69,52,57,45,87,47,88,38,32,	0,903,2159,2328,13921,25044,30976,33651,35423,40509,41374,42920,
#Partially deleted in new
chr9	121059	179047	chr9:121059-179047	1	-	121466	177768	789624	16	514,130,66,69,52,57,45,87,47,38,60,92,97,87,98,232,	0,901,2157,2326,13919,25042,30974,33649,35421,41372,42918,51021,52210,54638,56663,57756,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	121088	149446	chr9:121088-149446	0	-	121088	121088	8553170	5	1002,66,69,52,3345,	0,2128,2297,13890,25013,
#Partially deleted in new
chr9	121088	179012	chr9:121088-179012	0	-	161639	178969	789624	16	485,130,66,69,52,57,123,45,47,140,88,38,92,97,87,197,	0,872,2128,2297,13890,25013,30216,30945,35392,38912,40478,41343,50992,52181,54609,57727,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	121090	148625	chr9:121090-148625	0	-	121090	121090	8553170	6	483,130,66,69,52,2524,	0,870,2126,2295,13888,25011,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr9	121223	179042	chr9:121223-179042	0	-	161639	178969	789624	15	350,130,66,69,52,57,140,45,47,88,38,92,97,87,227,	0,737,1993,2162,13755,24878,26677,30810,35257,40343,41208,50857,52046,54474,57592,
#Partially deleted in new
chr9	121406	179008	chr9:121406-179008	1	-	121466	178969	789624	13	167,130,66,69,52,45,47,38,60,92,97,87,193,	0,554,1810,1979,13572,30627,35074,41025,42571,50674,51863,54291,57409,
#Partially deleted in new
chr9	121408	179021	chr9:121408-179021	1	-	121466	178969	789624	14	165,130,66,69,52,45,87,47,38,60,92,97,87,206,	0,552,1808,1977,13570,30625,33300,35072,41023,42569,50672,51861,54289,57407,
#Partially deleted in new
chr9	121409	166599	chr9:121409-166599	0	-	121409	121409	8553170	15	164,130,66,69,52,57,217,45,87,47,140,88,38,60,617,	0,551,1807,1976,13569,24692,29099,30624,33299,35071,38591,40157,41022,42568,44573,
#Deleted in new
chr9	121410	123747	chr9:121410-123747	0	-	121410	121410	8553170	4	163,130,66,362,	0,550,1806,1975,
#Partially deleted in new
chr9	121417	167605	chr9:121417-167605	0	-	121417	121417	8553170	13	156,130,66,69,52,57,123,45,87,47,38,60,1623,	0,543,1799,1968,13561,24684,29887,30616,33291,35063,41014,42560,44565,
#Partially deleted in new
chr9	121502	146154	chr9:121502-146154	0	-	121502	121502	8553170	6	71,176,66,69,52,53,	0,458,1714,1883,13476,24599,
#Partially deleted in new
chr9	122690	179052	chr9:122690-179052	0	-	161639	178969	789624	14	592,69,52,57,45,87,47,88,38,60,92,97,87,237,	0,695,12288,23411,29343,32018,33790,38876,39741,41287,49390,50579,53007,56125,
#Partially deleted in new
chr9	122842	179016	chr9:122842-179016	0	-	177797	178969	789624	13	440,69,52,45,87,47,38,60,92,97,87,98,201,	0,543,12136,29191,31866,33638,39589,41135,49238,50427,52855,54880,55973,
#Partially deleted in new
chr9	146113	172172	chr9:146113-172172	0	-	146113	146113	8553170	9	45,84,45,87,47,140,38,60,92,	0,4528,5920,8595,10367,13887,16318,17864,25967,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	147949	164039	chr9:147949-164039	0	-	161639	164039	789624	8	95,123,45,87,47,88,38,62,	0,3355,4084,6759,8531,13617,14482,16028,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	150131	164039	chr9:150131-164039	0	-	161639	164039	789624	5	1947,47,88,38,62,	0,6349,11435,12300,13846,
#Partially deleted in new
chr9	151576	179088	chr9:151576-179088	0	-	151576	151576	8553170	10	502,87,47,38,60,92,97,87,98,273,	0,3132,4904,10855,12401,20504,21693,24121,26146,27239,
#Partially deleted in new
chr9	151744	161647	chr9:151744-161647	0	-	161589	161647	789624	4	334,87,47,81,	0,2964,4736,9822,
#Partially deleted in new
chr9	152033	173325	chr9:152033-173325	0	-	164443	173325	789624	8	45,87,47,88,38,46,92,56,	0,2675,4447,9533,10398,12369,20047,21236,
#Partially deleted in new
chr9	152913	179025	chr9:152913-179025	1	-	154617	178969	789624	8	1882,47,38,60,92,97,87,210,	0,3567,9518,11064,19167,20356,22784,25902,
#Partially deleted in new
chr9	154731	172179	chr9:154731-172179	0	-	154731	154731	8553170	6	64,47,140,38,60,99,	0,1749,5269,7700,9246,17349,
#Partially deleted in new
chr9	160087	179018	chr9:160087-179018	0	-	160087	160087	8553170	8	53,38,60,92,97,87,98,203,	0,2344,3890,11993,13182,15610,17635,18728,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	171595	173371	chr9:171595-173371	0	-	171595	171595	8553170	2	577,102,	0,1674,
#Partially deleted in new
chr9	171952	179023	chr9:171952-179023	1	-	173265	177768	789624	4	1414,87,98,208,	0,3745,5770,6863,
#Partially deleted in new
chr9	171952	179045	chr9:171952-179045	1	-	173265	178969	789624	3	1414,87,230,	0,3745,6863,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	212823	215741	chr9:212823-215741	0	-	212823	212823	8553170	1	2918,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	213107	215893	chr9:213107-215893	3	-	214508	215396	789624	1	2786,	0,
#Partially deleted in new
chr9	214864	465259	chr9:214864-465259	3	+	214976	464219	789624	48	165,103,176,72,124,213,86,67,150,81,160,137,94,163,118,71,139,102,96,235,165,173,96,96,150,114,156,140,170,140,183,130,88,97,135,153,159,101,193,144,132,135,90,237,144,107,171,1101,	0,56762,71596,74645,89716,97089,102178,110806,113157,117533,119360,121717,124141,125294,153153,155365,156563,157320,161345,162112,164906,167648,171466,175606,181920,184281,190053,192065,199917,203203,205536,206084,207183,212020,213497,214837,217301,219010,219918,224380,226421,227010,228562,231505,234919,237146,248652,249294,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr9	214864	340620	chr9:214864-340620	0	+	214976	220847	789624	15	165,116,103,176,72,124,213,86,67,150,81,160,137,94,462,	0,5883,56762,71596,74645,89716,97089,102178,110806,113157,117533,119360,121717,124141,125294,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr9	214867	340620	chr9:214867-340620	0	+	214867	214867	8553170	14	162,103,176,72,124,213,86,67,150,81,160,137,94,462,	0,56759,71593,74642,89713,97086,102175,110803,113154,117530,119357,121714,124138,125291,
#Partially deleted in new
chr9	215170	289579	chr9:215170-289579	0	+	286508	289579	789624	4	246,103,176,70,	0,56456,71290,74339,
#Partially deleted in new
chr9	267965	273002	chr9:267965-273002	3	-	267965	267965	8553170	2	308,98,	0,4939,
#Partially deleted in new
chr9	273047	465259	chr9:273047-465259	1	+	286508	464219	789624	47	53,176,72,124,213,86,67,150,81,160,137,94,163,118,71,139,102,96,235,165,173,96,96,150,114,156,140,170,140,183,130,88,97,135,153,159,101,193,144,132,135,90,237,144,107,171,1101,	0,13413,16462,31533,38906,43995,52623,54974,59350,61177,63534,65958,67111,94970,97182,98380,99137,103162,103929,106723,109465,113283,117423,123737,126098,131870,133882,141734,145020,147353,147901,149000,153837,155314,156654,159118,160827,161735,166197,168238,168827,170379,173322,176736,178963,190469,191111,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	273049	340620	chr9:273049-340620	0	+	273049	273049	8553170	13	51,176,72,124,213,86,67,150,81,160,137,94,462,	0,13411,16460,31531,38904,43993,52621,54972,59348,61175,63532,65956,67109,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	273049	304703	chr9:273049-304703	0	+	286508	304703	789624	5	51,115,176,72,123,	0,7741,13411,16460,31531,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr9	273058	381387	chr9:273058-381387	0	+	286508	365624	789624	23	42,176,72,124,213,86,67,150,81,160,137,94,163,962,118,226,71,139,102,96,235,165,1109,	0,13402,16451,31522,38895,43984,52612,54963,59339,61166,63523,65947,67100,92532,94959,96163,97171,98369,99126,103151,103918,106712,107220,
#Partially deleted in new
chr9	273065	312941	chr9:273065-312941	0	+	273065	273065	8553170	5	35,176,72,124,988,	0,13395,16444,31515,38888,
#Partially deleted in new
chr9	273069	464526	chr9:273069-464526	1	+	286508	464219	789624	46	31,176,72,124,213,86,67,150,81,160,137,94,163,118,71,139,102,96,235,165,173,96,150,114,156,140,170,140,183,130,88,97,135,153,159,101,193,144,132,135,90,237,144,107,171,368,	0,13391,16440,31511,38884,43973,52601,54952,59328,61155,63512,65936,67089,94948,97160,98358,99115,103140,103907,106701,109443,117401,123715,126076,131848,133860,141712,144998,147331,147879,148978,153815,155292,156632,159096,160805,161713,166175,168216,168805,170357,173300,176714,178941,190447,191089,
#Boundary problem: need 46, got 0, diff 46, mapped 0.0
chr9	273083	465241	chr9:273083-465241	0	+	273083	273083	8553170	46	17,176,72,124,213,86,67,150,81,160,137,94,163,2283,139,102,96,235,165,173,96,96,150,114,156,140,170,140,183,130,88,97,135,153,159,101,193,144,132,135,90,237,144,107,171,1083,	0,13377,16426,31497,38870,43959,52587,54938,59314,61141,63498,65922,67075,94934,98344,99101,103126,103893,106687,109429,113247,117387,123701,126062,131834,133846,141698,144984,147317,147865,148964,153801,155278,156618,159082,160791,161699,166161,168202,168791,170343,173286,176700,178927,190433,191075,
#Partially deleted in new
chr9	311957	314466	chr9:311957-314466	0	+	311957	311957	8553170	2	209,175,	0,2334,
#Partially deleted in new
chr9	366228	405099	chr9:366228-405099	1	+	372271	405097	789624	13	324,118,71,102,96,235,165,173,96,96,150,114,182,	0,1789,4001,5956,9981,10748,13542,16284,20102,24242,30556,32917,38689,
#Partially deleted in new
chr9	366250	465255	chr9:366250-465255	1	+	368102	464219	789624	35	302,283,71,139,102,96,235,165,173,96,96,150,114,156,140,170,140,183,130,88,97,135,153,159,101,193,144,132,135,90,237,144,107,171,1097,	0,1767,3979,5177,5934,9959,10726,13520,16262,20080,24220,30534,32895,38667,40679,48531,51817,54150,54698,55797,60634,62111,63451,65915,67624,68532,72994,75035,75624,77176,80119,83533,85760,97266,97908,
#Partially deleted in new
chr9	420115	426953	chr9:420115-426953	0	+	420115	420115	8553170	5	65,183,130,88,69,	0,285,833,1932,6769,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	452491	469836	chr9:452491-469836	1	-	452491	452491	8553170	5	457,168,503,108,115,	0,1947,3709,13470,17230,
#Partially deleted in new
chr9	452492	456207	chr9:452492-456207	0	-	452492	452492	8553170	3	456,100,7,	0,2014,3708,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	454303	492248	chr9:454303-492248	1	-	454303	454303	8553170	4	303,503,110,165,	0,1897,34653,37780,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	454431	456988	chr9:454431-456988	0	-	454431	454431	8553170	2	175,788,	0,1769,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	454446	469802	chr9:454446-469802	0	-	454446	454446	8553170	4	160,503,166,81,	0,1754,12241,15275,
#Partially deleted in new
chr9	454575	469802	chr9:454575-469802	0	-	454575	454575	8553170	4	31,503,108,81,	0,1625,11386,15146,
#Partially deleted in new
chr9	454584	470961	chr9:454584-470961	0	-	454584	454584	8553170	3	22,503,197,	0,1616,16180,
#Partially deleted in new
chr9	456200	460507	chr9:456200-460507	0	-	456200	456200	8553170	2	503,792,	0,3515,
#Partially deleted in new
chr9	456203	470816	chr9:456203-470816	2	-	456203	456203	8553170	4	500,133,108,52,	0,711,9758,14561,
#Partially deleted in new
chr9	456210	460227	chr9:456210-460227	1	-	456210	456210	8553170	4	493,165,54,512,	0,1906,2159,3505,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	456517	467390	chr9:456517-467390	1	-	456517	456517	8553170	2	186,703,	0,10170,
#Partially deleted in new
chr9	456520	470934	chr9:456520-470934	1	-	456520	456520	8553170	5	183,133,151,108,170,	0,394,3195,9441,14244,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	456529	466866	chr9:456529-466866	0	-	456529	456529	8553170	5	174,133,151,108,179,	0,385,3186,9432,10158,
#Partially deleted in new
chr9	456544	467336	chr9:456544-467336	0	-	456544	456544	8553170	4	159,133,108,437,	0,370,9417,10355,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	457003	467219	chr9:457003-467219	0	-	457003	457003	8553170	4	44,151,108,532,	0,2712,8958,9684,
#Partially deleted in new
chr9	459715	466065	chr9:459715-466065	0	-	459715	459715	8553170	2	100,104,	0,6246,
#Partially deleted in new
chr9	463554	465247	chr9:463554-465247	0	+	463554	463554	8553170	3	133,120,175,	0,604,1518,
#Partially deleted in new
chr9	470591	484491	chr9:470591-484491	0	+	470591	470591	8553170	4	86,138,80,210,	0,857,2602,13690,
#Partially deleted in new
chr9	471466	476769	chr9:471466-476769	0	+	471466	471466	8553170	3	120,80,142,	0,1727,5161,
#Deleted in new
chr9	477749	478423	chr9:477749-478423	7	+	477749	477749	16724991	1	674,	0,
#Deleted in new
chr9	477855	478349	chr9:477855-478349	5	+	477855	477855	16724991	1	494,	0,
#Partially deleted in new
chr9	487773	495610	chr9:487773-495610	3	+	487773	487773	8553170	2	30,373,	0,7464,
#Partially deleted in new
chr9	504694	746106	chr9:504694-746106	1	+	676972	745235	0	13	60,615,120,2661,198,109,240,88,220,143,201,99,934,	0,44412,172195,206109,225356,226463,227683,230053,233590,236097,237510,239796,240478,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	504701	746103	chr9:504701-746103	0	+	504701	504701	8553170	11	53,120,2661,198,109,2458,220,143,201,99,931,	0,172188,206102,225349,226456,227676,233583,236090,237503,239789,240471,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	504702	734129	chr9:504702-734129	0	+	504702	504702	8553170	4	52,120,2661,4079,	0,172187,206101,225348,
#Partially deleted in new
chr9	504715	746105	chr9:504715-746105	1	+	676972	745235	0	12	39,120,2661,198,109,240,88,220,143,201,99,933,	0,172174,206088,225335,226442,227662,230032,233569,236076,237489,239775,240457,
#Partially deleted in new
chr9	547316	549531	chr9:547316-549531	0	+	547316	547316	8553170	2	25,342,	0,1873,
#Partially deleted in new
chr9	547317	549531	chr9:547317-549531	3	+	547317	547317	8553170	2	24,425,	0,1789,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	558825	558930	chr9:558825-558930	3	+	558825	558825	8553170	1	105,	0,
#Deleted in new
chr9	659985	660326	chr9:659985-660326	7	+	659985	659985	16724991	1	341,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	673477	685555	chr9:673477-685555	3	-	673477	673477	8553170	3	902,190,28,	0,7379,12050,
#Partially deleted in new
chr9	674123	677628	chr9:674123-677628	0	-	674123	674123	8553170	2	256,87,	0,3418,
#Partially deleted in new
chr9	706888	746103	chr9:706888-746103	1	+	711240	745235	0	11	359,2661,198,109,240,88,220,143,201,99,931,	0,3915,23162,24269,25489,27859,31396,33903,35316,37602,38284,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	732441	746102	chr9:732441-746102	0	+	732441	745235	789624	8	176,88,69,220,143,201,99,930,	0,2306,3270,5843,8350,9763,12049,12731,
#Partially deleted in new
chr9	734747	746104	chr9:734747-746104	0	+	734747	744688	789624	5	88,220,143,201,1614,	0,3537,6044,7457,9743,
#Partially deleted in new
chr9	841689	969090	chr9:841689-969090	3	+	841838	968139	0	5	503,184,284,145,1106,	0,5270,52222,75073,126295,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	841689	894985	chr9:841689-894985	0	+	841689	841689	8553170	3	503,184,1074,	0,5270,52222,
#Partially deleted in new
chr9	842713	968515	chr9:842713-968515	1	+	847079	968139	789624	5	241,184,284,145,531,	0,4246,51198,74049,125271,
#Partially deleted in new
chr9	976963	991731	chr9:976963-991731	3	+	977001	991005	789624	2	492,1691,	0,13077,
#Deleted in new
chr9	989836	990333	chr9:989836-990333	0	+	989997	990333	789624	1	497,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	1001857	1001963	chr9:1001857-1001963	3	-	1001857	1001857	8553170	1	106,	0,
#Partially deleted in new
chr9	1011084	1011799	chr9:1011084-1011799	7	+	1011084	1011084	16724991	2	302,90,	0,625,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	1045624	1048641	chr9:1045624-1048641	3	+	1045624	1045624	8553170	1	3017,	0,
#Deleted in new
chr9	1049857	1057064	chr9:1049857-1057064	1	+	1051613	1055774	789624	6	625,569,103,78,615,200,	0,1712,3864,5864,6358,7007,
#Deleted in new
chr9	1050353	1057550	chr9:1050353-1057550	3	+	1051613	1057273	789624	5	129,156,569,103,1335,	0,266,1216,3368,5862,
#Deleted in new
chr9	1050353	1057547	chr9:1050353-1057547	1	+	1051613	1055774	789624	6	129,156,569,103,78,1332,	0,266,1216,3368,5368,5862,
#Deleted in new
chr9	1050354	1055872	chr9:1050354-1055872	1	+	1051613	1055774	789624	4	421,569,103,151,	0,1215,3367,5367,
#Deleted in new
chr9	1051613	1057552	chr9:1051613-1057552	1	+	1051613	1055774	789624	3	525,103,1831,	0,2108,4108,
#Deleted in new
chr9	1051613	1057550	chr9:1051613-1057550	1	+	1051613	1057273	789624	4	48,9,103,1335,	0,516,2108,4602,
#Deleted in new
chr9	1051613	1057552	chr9:1051613-1057552	1	+	1051613	1057273	789624	3	525,103,1337,	0,2108,4602,
#Deleted in new
chr9	1052999	1057549	chr9:1052999-1057549	0	+	1052999	1052999	8553170	3	109,103,1334,	0,722,3216,
#Deleted in new
chr9	1054623	1057551	chr9:1054623-1057551	0	+	1054623	1054623	8553170	3	30,78,1336,	0,1098,1592,
#Partially deleted in new
chr9	1151806	1152140	chr9:1151806-1152140	7	-	1151806	1151806	16724991	1	334,	0,
#Partially deleted in new
chr9	1164413	1164867	chr9:1164413-1164867	7	-	1164413	1164413	16724991	1	454,	0,
#Deleted in new
chr9	1328663	1328987	chr9:1328663-1328987	7	+	1328663	1328663	16724991	1	324,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	1333836	1333953	chr9:1333836-1333953	7	+	1333836	1333836	16724991	1	117,	0,
#Deleted in new
chr9	1977783	1978547	chr9:1977783-1978547	7	-	1977783	1977783	16724991	1	764,	0,
#Partially deleted in new
chr9	1980289	2029051	chr9:1980289-2029051	0	+	2029022	2029051	789624	2	97,65,	0,48697,
#Partially deleted in new
chr9	2015185	2193620	chr9:2015185-2193620	1	+	2029022	2192739	0	33	219,261,130,435,256,127,174,174,171,54,131,58,101,148,164,67,111,243,114,108,87,47,167,164,228,78,219,218,106,102,133,143,917,	0,13801,17766,24280,32043,39411,41486,43105,45630,55232,58026,58380,61043,62443,66646,68161,68900,71643,73314,81471,82199,86384,88817,95068,100636,104272,108533,146500,166385,166955,170910,176080,177518,
#Partially deleted in new
chr9	2015218	2193574	chr9:2015218-2193574	3	+	2029022	2192739	789624	33	186,261,130,435,256,127,174,174,171,54,131,58,101,148,164,67,111,69,114,108,87,47,167,164,228,78,219,218,106,102,133,143,871,	0,13768,17733,24247,32010,39378,41453,43072,45597,55199,57993,58347,61010,62410,66613,68128,68867,71610,73281,81438,82166,86351,88784,95035,100603,104239,108500,146467,166352,166922,170877,176047,177485,
#Partially deleted in new
chr9	2015220	2039575	chr9:2015220-2039575	0	+	2033005	2039575	789624	3	184,130,110,	0,17731,24245,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	2015280	2046037	chr9:2015280-2046037	1	+	2029022	2041407	789624	5	124,261,130,435,4707,	0,13706,17671,24185,26050,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr9	2015287	2193574	chr9:2015287-2193574	1	+	2029022	2192739	0	34	117,261,130,435,256,127,174,174,171,54,131,58,101,148,164,67,111,243,114,108,87,47,167,164,228,78,219,218,54,106,102,133,143,871,	0,13699,17664,24178,31941,39309,41384,43003,45528,55130,57924,58278,60941,62341,66544,68059,68798,71541,73212,81369,82097,86282,88715,94966,100534,104170,108431,146398,155131,166283,166853,170808,175978,177416,
#Partially deleted in new
chr9	2015346	2033188	chr9:2015346-2033188	0	+	2015346	2015346	8553170	3	58,261,237,	0,13640,17605,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	2015346	2045869	chr9:2015346-2045869	1	+	2029022	2039950	789624	4	58,261,130,6404,	0,13640,17605,24119,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	2015970	2042802	chr9:2015970-2042802	1	+	2029022	2041407	789624	5	173,261,130,435,1472,	0,13016,16981,23495,25360,
#Partially deleted in new
chr9	2016141	2029042	chr9:2016141-2029042	0	+	2029022	2029042	8553170	2	72,56,	0,12845,
#Partially deleted in new
chr9	2016369	2029031	chr9:2016369-2029031	0	+	2029022	2029031	8553170	2	55,45,	0,12617,
#Partially deleted in new
chr9	2017086	2039689	chr9:2017086-2039689	0	+	2029022	2039689	789624	4	121,261,130,224,	0,11900,15865,22379,
#Partially deleted in new
chr9	2017411	2193577	chr9:2017411-2193577	1	+	2029022	2192739	0	33	86,261,130,435,256,127,174,174,171,54,131,58,101,148,164,67,111,243,114,108,87,47,167,164,228,78,219,218,106,102,133,143,874,	0,11575,15540,22054,29817,37185,39260,40879,43404,53006,55800,56154,58817,60217,64420,65935,66674,69417,71088,79245,79973,84158,86591,92842,98410,102046,106307,144274,164159,164729,168684,173854,175292,
#Partially deleted in new
chr9	2017429	2039756	chr9:2017429-2039756	0	+	2029022	2039756	789624	4	73,261,130,291,	0,11557,15522,22036,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr9	2017487	2193571	chr9:2017487-2193571	0	+	2029022	2182174	789624	33	312,261,130,435,256,127,174,174,171,54,131,58,101,148,164,67,111,243,114,108,87,47,167,164,228,78,219,218,54,102,133,143,868,	0,11499,15464,21978,29741,37109,39184,40803,43328,52930,55724,56078,58741,60141,64344,65859,66598,69341,71012,79169,79897,84082,86515,92766,98334,101970,106231,144198,152931,164653,168608,173778,175216,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	2017585	2045921	chr9:2017585-2045921	1	+	2029022	2039950	789624	4	214,261,130,6456,	0,11401,15366,21880,
#Partially deleted in new
chr9	2017989	2029036	chr9:2017989-2029036	0	+	2029022	2029036	8553170	2	50,50,	0,10997,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr9	2021944	2193624	chr9:2021944-2193624	1	+	2029022	2192739	0	34	173,261,130,435,256,127,174,174,171,54,131,58,101,148,164,67,111,243,114,108,87,47,167,164,228,78,219,218,54,106,102,133,143,921,	0,7042,11007,17521,25284,32652,34727,36346,38871,48473,51267,51621,54284,55684,59887,61402,62141,64884,66555,74712,75440,79625,82058,88309,93877,97513,101774,139741,148474,159626,160196,164151,169321,170759,
#Deleted in new
chr9	2027719	2029030	chr9:2027719-2029030	0	+	2029022	2029030	8553170	2	56,44,	0,1267,
#Partially deleted in new
chr9	2032519	2039857	chr9:2032519-2039857	0	+	2032519	2032519	8553170	3	123,130,392,	0,432,6946,
#Deleted in new
chr9	2041899	2046023	chr9:2041899-2046023	3	-	2041899	2041899	8553170	2	231,189,	0,3935,
#Deleted in new
chr9	2047314	2047954	chr9:2047314-2047954	0	+	2047314	2047488	789624	1	640,	0,
#Partially deleted in new
chr9	2055572	2060928	chr9:2055572-2060928	0	+	2055572	2055572	8553170	4	110,174,174,113,	0,1099,2718,5243,
#Deleted in new
chr9	2058160	2061008	chr9:2058160-2061008	0	+	2058160	2058160	8553170	2	304,193,	0,2655,
#Deleted in new
chr9	2070432	2073247	chr9:2070432-2073247	0	+	2070432	2073247	789624	3	39,36,36,	0,1599,2779,
#Partially deleted in new
chr9	2073096	2081860	chr9:2073096-2081860	0	+	2073096	2073096	8553170	5	246,58,101,148,29,	0,469,3132,4532,8735,
#Partially deleted in new
chr9	2075067	2076262	chr9:2075067-2076262	0	+	2075067	2075067	8553170	2	66,34,	0,1161,
#Partially deleted in new
chr9	2075224	2076293	chr9:2075224-2076293	0	+	2075224	2075224	8553170	2	35,65,	0,1004,
#Partially deleted in new
chr9	2075348	2076279	chr9:2075348-2076279	0	+	2075348	2075348	8553170	2	48,51,	0,880,
#Partially deleted in new
chr9	2076283	2096689	chr9:2076283-2096689	0	+	2076283	2096689	789624	7	46,148,164,67,111,114,33,	0,1345,5548,7063,7802,12216,20373,
#Partially deleted in new
chr9	2085727	2161795	chr9:2085727-2161795	0	+	2085727	2085727	8553170	12	17,243,114,108,87,47,167,164,228,78,219,110,	0,1101,2772,10929,11657,15842,18275,24526,30094,33730,37991,75958,
#Partially deleted in new
chr9	2085974	2193624	chr9:2085974-2193624	0	+	2085974	2085974	8553170	17	133,243,114,108,87,47,167,164,228,78,219,218,106,102,133,143,921,	0,854,2525,10682,11410,15595,18028,24279,29847,33483,37744,75711,95596,96166,100121,105291,106729,
#Deleted in new
chr9	2087021	2087350	chr9:2087021-2087350	0	+	2087021	2087021	8553170	2	50,50,	0,279,
#Partially deleted in new
chr9	2096600	2110360	chr9:2096600-2110360	0	+	2096600	2096600	8553170	5	164,87,47,167,107,	0,784,4969,7402,13653,
#Deleted in new
chr9	2097116	2097415	chr9:2097116-2097415	0	+	2097116	2097116	8553170	2	69,31,	0,268,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr9	2097235	2193607	chr9:2097235-2193607	0	+	2097235	2097235	8553170	15	25,87,47,167,164,228,78,219,218,54,106,102,133,143,904,	0,149,4334,6767,13018,18586,22222,26483,64450,73183,84335,84905,88860,94030,95468,
#Partially deleted in new
chr9	2110356	2186121	chr9:2110356-2186121	0	+	2110356	2186121	789624	7	61,78,219,218,106,102,26,	0,9101,13362,51329,71214,71784,75739,
#Partially deleted in new
chr9	2123849	2193560	chr9:2123849-2193560	0	+	2123849	2191432	789624	6	88,218,106,102,133,2295,	0,37836,57721,58291,62246,67416,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	2157679	2186154	chr9:2157679-2186154	0	+	2157881	2186154	789624	6	211,218,54,106,102,59,	0,4006,12739,23891,24461,28416,
#Partially deleted in new
chr9	2157682	2193574	chr9:2157682-2193574	1	+	2157881	2192739	789624	7	208,218,106,102,133,143,871,	0,4003,23888,24458,28413,33583,35021,
#Partially deleted in new
chr9	2158238	2186177	chr9:2158238-2186177	0	+	2159816	2186177	789624	6	154,96,218,106,102,82,	0,1575,3447,23332,23902,27857,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	2158302	2192838	chr9:2158302-2192838	1	+	2161712	2192739	789624	8	48,218,54,106,102,133,143,135,	0,3383,12116,23268,23838,27793,32963,34401,
#Partially deleted in new
chr9	2158448	2191298	chr9:2158448-2191298	0	+	2159816	2191298	789624	7	146,96,218,106,102,133,33,	0,1365,3237,23122,23692,27647,32817,
#Partially deleted in new
chr9	2158451	2193387	chr9:2158451-2193387	1	+	2159816	2192739	789624	8	102,96,218,106,102,133,143,684,	0,1362,3234,23119,23689,27644,32814,34252,
#Partially deleted in new
chr9	2158452	2193571	chr9:2158452-2193571	0	+	2159816	2161854	789624	9	142,96,35,218,106,102,133,143,868,	0,1361,2548,3233,23118,23688,27643,32813,34251,
#Partially deleted in new
chr9	2158455	2193624	chr9:2158455-2193624	1	+	2158975	2192739	789624	8	523,96,218,106,102,133,143,921,	0,1358,3230,23115,23685,27640,32810,34248,
#Partially deleted in new
chr9	2158455	2192856	chr9:2158455-2192856	0	+	2159816	2161854	789624	9	132,96,35,218,106,102,133,143,153,	0,1358,2545,3230,23115,23685,27640,32810,34248,
#Partially deleted in new
chr9	2158457	2193042	chr9:2158457-2193042	1	+	2161712	2192739	789624	7	137,218,106,102,133,143,339,	0,3228,23113,23683,27638,32808,34246,
#Partially deleted in new
chr9	2158460	2192758	chr9:2158460-2192758	1	+	2159816	2192739	789624	8	127,96,218,106,102,133,143,55,	0,1353,3225,23110,23680,27635,32805,34243,
#Partially deleted in new
chr9	2158469	2193603	chr9:2158469-2193603	0	+	2159816	2161854	789624	10	118,38,96,35,218,106,102,133,143,900,	0,959,1344,2531,3216,23101,23671,27626,32796,34234,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	2158472	2192752	chr9:2158472-2192752	1	+	2161712	2192739	789624	9	115,35,218,54,106,102,133,143,49,	0,2528,3213,11946,23098,23668,27623,32793,34231,
#Partially deleted in new
chr9	2158474	2191300	chr9:2158474-2191300	0	+	2159816	2191300	789624	7	22,96,218,106,102,133,35,	0,1339,3211,23096,23666,27621,32791,
#Partially deleted in new
chr9	2158475	2191339	chr9:2158475-2191339	0	+	2161712	2191339	789624	6	78,218,106,102,133,74,	0,3210,23095,23665,27620,32790,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	2158492	2191292	chr9:2158492-2191292	0	+	2159816	2191292	789624	8	4,96,218,54,106,102,133,27,	0,1321,3193,11926,23078,23648,27603,32773,
#Partially deleted in new
chr9	2158492	2186204	chr9:2158492-2186204	0	+	2161712	2186204	789624	5	95,218,106,102,109,	0,3193,23078,23648,27603,
#Deleted in new
chr9	2158563	2161886	chr9:2158563-2161886	0	+	2158975	2161886	789624	2	415,201,	0,3122,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	2158581	2191294	chr9:2158581-2191294	0	+	2159816	2191294	789624	8	6,96,218,54,106,102,133,29,	0,1232,3104,11837,22989,23559,27514,32684,
#Deleted in new
chr9	2158955	2161702	chr9:2158955-2161702	0	+	2158955	2158955	8553170	3	23,60,17,	0,2020,2730,
#Partially deleted in new
chr9	2159671	2186223	chr9:2159671-2186223	0	+	2159768	2186223	789624	5	238,218,106,102,128,	0,2014,21899,22469,26424,
#Partially deleted in new
chr9	2159778	2191342	chr9:2159778-2191342	0	+	2159778	2161735	789624	6	126,218,106,102,133,77,	0,1907,21792,22362,26317,31487,
#Partially deleted in new
chr9	2159944	2191311	chr9:2159944-2191311	0	+	2161712	2191311	789624	6	28,218,106,102,133,46,	0,1741,21626,22196,26151,31321,
#Deleted in new
chr9	2160234	2161843	chr9:2160234-2161843	0	+	2160234	2160234	8553170	3	385,35,158,	0,766,1451,
#Partially deleted in new
chr9	2160263	2192751	chr9:2160263-2192751	1	+	2160574	2192739	789624	7	356,218,106,102,133,143,48,	0,1422,21307,21877,25832,31002,32440,
#Partially deleted in new
chr9	2160612	2186143	chr9:2160612-2186143	0	+	2161712	2186143	789624	5	423,218,106,102,48,	0,1073,20958,21528,25483,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	2162762	2162953	chr9:2162762-2162953	3	-	2162762	2162762	8553170	1	191,	0,
#Partially deleted in new
chr9	2181232	2192796	chr9:2181232-2192796	0	+	2181232	2181232	8553170	6	95,106,102,133,143,93,	0,338,908,4863,10033,11471,
#Partially deleted in new
chr9	2181570	2186183	chr9:2181570-2186183	0	+	2181570	2182154	789624	3	106,97,88,	0,575,4525,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	2228960	2229241	chr9:2228960-2229241	3	-	2228960	2228960	8553170	1	281,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	2421596	2621386	chr9:2421596-2621386	3	-	2421596	2421596	8553170	12	2914,144,186,123,134,122,144,105,180,95,154,158,	0,3800,71643,72583,81673,84822,100306,101456,103941,114762,117802,199632,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	2422701	2621413	chr9:2422701-2621413	1	-	2422701	2422701	8553170	11	1809,144,106,123,122,144,105,180,95,154,185,	0,2695,70373,71478,83717,99201,100351,102836,113657,116697,198527,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	2503279	2522019	chr9:2503279-2522019	0	-	2503279	2503279	8553170	3	124,182,117,	0,3079,18623,
#Partially deleted in new
chr9	2535651	2570754	chr9:2535651-2570754	0	-	2535651	2535651	8553170	4	364,95,154,133,	0,707,3747,34970,
#Partially deleted in new
chr9	2535651	2622373	chr9:2535651-2622373	0	-	2535651	2535651	789624	4	364,95,154,274,	0,707,3747,86448,
#Partially deleted in new
chr9	2535656	2643359	chr9:2535656-2643359	1	-	2535656	2535656	8553170	8	359,95,154,172,120,123,123,200,	0,702,3742,86443,99796,104202,105720,107503,
#Partially deleted in new
chr9	2541096	2541635	chr9:2541096-2541635	3	+	2541096	2541096	8553170	2	118,88,	0,451,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr9	2621833	2660053	chr9:2621833-2660053	3	+	2622189	2653868	0	19	438,120,123,123,372,123,123,120,126,172,219,119,140,142,147,84,81,170,6221,	0,13619,18025,19543,21326,21794,22003,22900,23123,23740,24500,25640,26374,26835,28536,29581,30040,30946,31999,
#Partially deleted in new
chr9	2621974	2643355	chr9:2621974-2643355	0	+	2622189	2643355	789624	4	297,120,123,196,	0,13478,17884,21185,
#Partially deleted in new
chr9	2622099	2654480	chr9:2622099-2654480	1	+	2622189	2653868	0	18	172,120,123,123,372,123,123,120,126,172,219,119,140,142,147,81,170,648,	0,13353,17759,19277,21060,21528,21737,22634,22857,23474,24234,25374,26108,26569,28270,29774,30680,31733,
#Deleted in new
chr9	2646337	2647768	chr9:2646337-2647768	0	+	2646337	2646337	8553170	2	215,295,	0,1136,
#Partially deleted in new
chr9	2717501	2730037	chr9:2717501-2730037	3	+	2717739	2729727	789624	2	1594,592,	0,11944,
#Partially deleted in new
chr9	2720468	2807830	chr9:2720468-2807830	0	-	2804330	2807830	789624	4	64,52,207,17,	0,62287,83788,87345,
#Partially deleted in new
chr9	2804163	2844241	chr9:2804163-2844241	3	-	2804330	2838507	0	18	300,91,88,223,143,81,54,99,79,104,175,67,94,76,136,222,92,197,	0,3650,6180,7197,8056,15854,19617,20553,22909,24511,25610,26798,27087,29193,29867,33016,34262,39881,
#Partially deleted in new
chr9	2804166	2807974	chr9:2804166-2807974	0	-	2804166	2804166	8553170	2	297,161,	0,3647,
#Deleted in new
chr9	2828474	2829925	chr9:2828474-2829925	0	-	2828474	2828474	8553170	2	304,152,	0,1299,
#Deleted in new
chr9	2875441	2876427	chr9:2875441-2876427	7	-	2875441	2875441	16724991	1	986,	0,
#Deleted in new
chr9	2900319	2900804	chr9:2900319-2900804	7	-	2900319	2900319	16724991	1	485,	0,
#Partially deleted in new
chr9	2907072	3053408	chr9:2907072-3053408	7	-	2907072	2907072	16724991	11	91,138,92,86,82,91,178,93,105,107,122,	0,9622,12166,14716,16118,36492,41032,85390,105851,106998,146214,
#Partially deleted in new
chr9	2919098	2943654	chr9:2919098-2943654	4	-	2919098	2919098	16724991	4	207,86,82,90,	0,2690,4092,24466,
#Partially deleted in new
chr9	2943506	2949586	chr9:2943506-2949586	4	-	2943506	2943506	16724991	3	149,178,86,	0,4598,5994,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	2992061	3014177	chr9:2992061-3014177	4	-	2992061	2992061	16724991	4	164,116,105,107,	0,378,20862,22009,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	3181588	3198517	chr9:3181588-3198517	3	+	3181588	3181588	8553170	4	301,118,135,332,	0,5329,11871,16597,
#Partially deleted in new
chr9	3218296	3525983	chr9:3218296-3525983	1	-	3225041	3395588	789624	18	6984,43,154,209,150,98,155,116,113,122,120,182,75,259,98,125,67,237,	0,10550,29735,38694,44638,47911,52074,52706,57203,59043,69834,74780,83249,111962,128370,177175,271982,307450,
#Partially deleted in new
chr9	3218301	3526001	chr9:3218301-3526001	3	-	3225041	3395588	789624	17	6979,43,154,209,150,98,155,116,113,122,120,182,75,259,98,125,255,	0,10545,29730,38689,44633,47906,52069,52701,57198,59038,69829,74775,83244,111957,128365,177170,307445,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr9	3247036	3395596	chr9:3247036-3395596	1	-	3247875	3395588	789624	14	1149,209,150,98,155,116,113,122,120,182,75,259,98,125,	0,9954,15898,19171,23334,23966,28463,30303,41094,46040,54509,83222,99630,148435,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	3247513	3257199	chr9:3247513-3257199	0	-	3247771	3257199	789624	3	270,154,209,	0,518,9477,
#Partially deleted in new
chr9	3257001	3270738	chr9:3257001-3270738	0	-	3257001	3270446	789624	4	198,150,98,368,	0,5933,9206,13369,
#Partially deleted in new
chr9	3270929	3489487	chr9:3270929-3489487	1	-	3270962	3395588	789624	11	189,113,122,120,182,75,259,98,125,120,119,	0,4570,6410,17201,22147,30616,59329,75737,124542,217846,218439,
#Partially deleted in new
chr9	3293083	3489416	chr9:3293083-3489416	0	-	3293083	3395588	789624	6	175,259,98,125,117,48,	0,37175,53583,102388,195692,196285,
#Partially deleted in new
chr9	3301542	3489428	chr9:3301542-3489428	0	-	3301542	3395588	789624	6	78,259,98,125,120,60,	0,28716,45124,93929,187233,187826,
#Partially deleted in new
chr9	3323960	3346764	chr9:3323960-3346764	0	-	3323981	3346764	789624	3	135,259,98,	0,6298,22706,
#Partially deleted in new
chr9	3323960	3346764	chr9:3323960-3346764	0	-	3324078	3346764	789624	3	169,259,98,	0,6298,22706,
#Partially deleted in new
chr9	3330316	3526004	chr9:3330316-3526004	0	-	3330316	3395588	789624	6	201,98,125,120,67,258,	0,16350,65155,158459,159962,195430,
#Partially deleted in new
chr9	3344731	3395588	chr9:3344731-3395588	1	-	3344837	3395588	789624	3	149,98,117,	0,1935,50740,
#Deleted in new
chr9	3364328	3364792	chr9:3364328-3364792	7	-	3364328	3364328	16724991	1	464,	0,
#Partially deleted in new
chr9	3526722	3671634	chr9:3526722-3671634	3	+	3526722	3526722	8553170	6	55,135,96,62,46,158,	0,20055,42071,75800,79970,144754,
#Deleted in new
chr9	3647334	3648338	chr9:3647334-3648338	3	+	3647334	3647334	8553170	2	143,585,	0,419,
#Partially deleted in new
chr9	3668085	3671646	chr9:3668085-3671646	0	+	3668085	3668085	8553170	2	323,173,	0,3388,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	3668164	3691814	chr9:3668164-3691814	1	+	3668164	3668164	789624	5	244,172,238,123,311,	0,3309,6246,22672,23339,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	3684075	3689626	chr9:3684075-3689626	3	-	3684075	3684075	8553170	2	384,295,	0,5256,
#Partially deleted in new
chr9	3824126	4152183	chr9:3824126-4152183	3	-	3828271	4125864	789624	10	4282,183,176,169,145,111,162,1114,208,117,	0,5183,31882,55300,74564,108233,112901,293641,301607,327940,
#Partially deleted in new
chr9	3825254	3975199	chr9:3825254-3975199	0	-	3825254	3825254	8553170	8	3154,183,176,169,145,111,162,66,	0,4055,30754,54172,73436,107105,111773,149879,
#Partially deleted in new
chr9	3827682	4152148	chr9:3827682-4152148	0	-	3827682	3827682	8553170	9	726,183,176,169,145,111,162,117,35,	0,1627,28326,51744,71008,104677,109345,323257,324431,
#Partially deleted in new
chr9	3827697	4299916	chr9:3827697-4299916	1	-	3828271	4286425	789624	11	711,183,176,169,145,111,162,1114,208,486,496,	0,1612,28311,51729,70993,104662,109330,290070,298036,458340,471723,
#Partially deleted in new
chr9	3855436	4118017	chr9:3855436-4118017	0	-	3855436	3855436	8553170	6	748,169,145,111,162,250,	0,23990,43254,76923,81591,262331,
#Deleted in new
chr9	3875583	3878809	chr9:3875583-3878809	3	+	3875583	3875583	8553170	2	35,208,	0,3018,
#Partially deleted in new
chr9	3898253	3937189	chr9:3898253-3937189	0	-	3898253	3898253	8553170	3	582,111,162,	0,34106,38774,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	3898641	3901248	chr9:3898641-3901248	3	+	3898641	3898641	789624	2	318,416,	0,2191,
#Partially deleted in new
chr9	3932359	4081361	chr9:3932359-4081361	0	-	3932359	3932359	8553170	4	111,124,162,134,	0,435,4668,148868,
#Partially deleted in new
chr9	3937093	4035998	chr9:3937093-4035998	0	-	3937093	3937093	8553170	3	96,516,161,	0,97433,98744,
#Deleted in new
chr9	4070905	4071884	chr9:4070905-4071884	3	-	4070905	4070905	8553170	2	476,159,	0,820,
#Partially deleted in new
chr9	4118529	4299836	chr9:4118529-4299836	0	-	4118529	4118529	8553170	2	352,416,	0,180891,
#Partially deleted in new
chr9	4118744	4145193	chr9:4118744-4145193	0	-	4118744	4125864	789624	3	137,208,355,	0,6989,26094,
#Partially deleted in new
chr9	4118744	4145193	chr9:4118744-4145193	0	-	4118744	4118744	8553170	2	137,355,	0,26094,
#Partially deleted in new
chr9	4118744	4299916	chr9:4118744-4299916	0	-	4118744	4286425	789624	4	137,208,486,496,	0,6989,167293,180676,
#Partially deleted in new
chr9	4118744	4147644	chr9:4118744-4147644	0	-	4118744	4125864	789624	3	137,208,348,	0,6989,28552,
#Partially deleted in new
chr9	4118744	4298496	chr9:4118744-4298496	0	-	4118744	4125864	789624	3	137,208,113,	0,6989,179639,
#Partially deleted in new
chr9	4118744	4298496	chr9:4118744-4298496	0	-	4118744	4286425	789624	4	137,208,486,113,	0,6989,167293,179639,
#Partially deleted in new
chr9	4118744	4299594	chr9:4118744-4299594	0	-	4118840	4286425	789624	3	137,486,174,	0,167293,180676,
#Partially deleted in new
chr9	4123693	4152147	chr9:4123693-4152147	1	-	4123804	4125864	789624	4	151,208,117,34,	0,2040,27246,28420,
#Partially deleted in new
chr9	4285538	4299916	chr9:4285538-4299916	0	-	4285538	4285538	8553170	2	985,496,	0,13882,
#Deleted in new
chr9	4299389	4306046	chr9:4299389-4306046	3	+	4299389	4299389	8553170	2	34,839,	0,5818,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	4386409	4386556	chr9:4386409-4386556	3	-	4386409	4386409	8553170	1	147,	0,
#Partially deleted in new
chr9	4490443	4587469	chr9:4490443-4587469	3	+	4490679	4585558	789624	12	327,141,93,115,43,99,185,108,123,195,135,2158,	0,54123,71005,73900,75603,77225,81760,83463,85557,86125,92594,94868,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	4553385	4666508	chr9:4553385-4666508	0	-	4625552	4666250	789624	13	1003,157,91,94,103,350,130,78,125,49,138,45,74,	0,47267,50793,51961,69022,71831,73040,75705,81889,102655,108513,112826,113049,
#Partially deleted in new
chr9	4559804	4564458	chr9:4559804-4564458	0	+	4559804	4559804	8553170	3	276,93,115,	0,1644,4539,
#Partially deleted in new
chr9	4572334	4585557	chr9:4572334-4585557	0	+	4572334	4585557	789624	5	54,108,123,195,246,	0,1572,3666,4234,12977,
#Partially deleted in new
chr9	4588820	4666423	chr9:4588820-4666423	0	-	4604179	4666250	789624	14	141,96,157,91,94,188,35,103,240,78,125,49,138,212,	0,7614,11832,15358,16526,29102,30043,33587,36506,40270,46454,67220,73078,77391,
#Partially deleted in new
chr9	4588820	4666428	chr9:4588820-4666428	0	-	4627829	4666250	789624	17	141,157,91,94,121,188,35,103,240,104,78,125,42,49,138,45,92,	0,11832,15358,16526,28582,29102,30043,33587,36506,38932,40270,46454,57666,67220,73078,77391,77516,
#Partially deleted in new
chr9	4600519	4666347	chr9:4600519-4666347	3	-	4605378	4666250	789624	10	290,94,103,240,78,125,42,49,138,136,	0,4827,21888,24807,28571,34755,45967,55521,61379,65692,
#Partially deleted in new
chr9	4600609	4666666	chr9:4600609-4666666	1	-	4604179	4666250	789624	11	200,91,94,188,35,103,240,78,138,45,232,	0,3569,4737,17313,18254,21798,24717,28481,61289,65602,65825,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr9	4600610	4666449	chr9:4600610-4666449	0	-	4627829	4666250	789624	15	199,91,94,188,35,103,240,130,104,78,125,42,49,138,238,	0,3568,4736,17312,18253,21797,24716,25815,27142,28480,34664,45876,55430,61288,65601,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	4625403	4666423	chr9:4625403-4666423	0	-	4625403	4625403	8553170	7	163,130,78,125,49,138,212,	0,1022,3687,9871,30637,36495,40808,
#Partially deleted in new
chr9	4625508	4666428	chr9:4625508-4666428	0	-	4625508	4625508	8553170	9	58,104,78,125,42,49,138,45,92,	0,2244,3582,9766,20978,30532,36390,40703,40828,
#Partially deleted in new
chr9	4625525	4666674	chr9:4625525-4666674	0	-	4625525	4625525	8553170	5	41,125,138,45,240,	0,9749,36373,40686,40909,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	4625637	4666399	chr9:4625637-4666399	0	-	4625637	4625637	8553170	6	3531,125,42,49,138,188,	0,9637,20849,30403,36261,40574,
#Deleted in new
chr9	4633026	4633756	chr9:4633026-4633756	7	+	4633026	4633026	16724991	1	730,	0,
#Partially deleted in new
chr9	4635274	4666436	chr9:4635274-4666436	0	-	4635274	4635274	8553170	3	125,138,225,	0,26624,30937,
#Partially deleted in new
chr9	4646298	4666307	chr9:4646298-4666307	0	-	4646298	4646298	8553170	4	230,49,138,96,	0,9742,15600,19913,
#Deleted in new
chr9	4662314	4665258	chr9:4662314-4665258	3	+	4662375	4663263	789624	1	2944,	0,
#Deleted in new
chr9	4663097	4666464	chr9:4663097-4666464	0	-	4663097	4663097	8553170	2	313,253,	0,3114,
#Partially deleted in new
chr9	4676599	4679471	chr9:4676599-4679471	3	-	4676599	4676599	789624	2	150,85,	0,2787,
#Deleted in new
chr9	4678818	4679502	chr9:4678818-4679502	1	-	4678818	4678818	8553170	2	347,116,	0,568,
#Partially deleted in new
chr9	4679558	4703208	chr9:4679558-4703208	1	+	4679767	4703100	789624	7	341,282,94,116,123,165,123,	0,5318,8954,17537,18198,22305,23527,
#Partially deleted in new
chr9	4679565	4708398	chr9:4679565-4708398	3	+	4679767	4706112	789624	7	334,282,94,116,123,165,2388,	0,5311,8947,17530,18191,22298,26445,
#Partially deleted in new
chr9	4679714	4685475	chr9:4679714-4685475	0	+	4679714	4679714	8553170	2	185,599,	0,5162,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	4709558	4741799	chr9:4709558-4741799	1	-	4712975	4722566	0	5	3538,119,173,120,79,	0,8860,9576,12947,32162,
#Partially deleted in new
chr9	4711154	4741318	chr9:4711154-4741318	3	-	4712975	4741087	0	5	1942,119,173,120,382,	0,7264,7980,11351,29782,
#Partially deleted in new
chr9	4712044	4742043	chr9:4712044-4742043	1	-	4712975	4722566	0	5	1052,119,173,120,72,	0,6374,7090,10461,29927,
#Partially deleted in new
chr9	4712974	4741227	chr9:4712974-4741227	1	-	4712975	4741087	0	4	122,119,173,291,	0,5444,6160,27962,
#Deleted in new
chr9	4768616	4769895	chr9:4768616-4769895	7	-	4768616	4768616	16724991	1	1279,	0,
#Partially deleted in new
chr9	4781474	4782078	chr9:4781474-4782078	7	-	4781474	4781474	16724991	1	604,	0,
#Partially deleted in new
chr9	4792868	4861064	chr9:4792868-4861064	3	+	4793091	4860275	789624	9	359,72,176,75,125,126,157,104,940,	0,30679,33989,40285,41272,48363,51656,56578,67256,
#Partially deleted in new
chr9	4792975	4827337	chr9:4792975-4827337	1	+	4793091	4827177	789624	3	252,72,480,	0,30572,33882,
#Partially deleted in new
chr9	4792979	4860861	chr9:4792979-4860861	1	+	4834155	4860275	789624	8	248,72,75,125,126,157,104,737,	0,30568,40174,41161,48252,51545,56467,67145,
#Partially deleted in new
chr9	4793086	4841357	chr9:4793086-4841357	0	+	4793086	4793086	8553170	4	141,72,75,153,	0,30461,40067,48118,
#Partially deleted in new
chr9	4803787	4804972	chr9:4803787-4804972	7	-	4803787	4803787	16724991	1	1185,	0,
#Partially deleted in new
chr9	4836725	4860472	chr9:4836725-4860472	1	+	4841205	4860275	789624	5	39,153,157,104,348,	0,4479,7799,12721,23399,
#Partially deleted in new
chr9	4839517	4860292	chr9:4839517-4860292	1	+	4841205	4860275	789624	5	176,153,157,104,168,	0,1687,5007,9929,20607,
#Partially deleted in new
chr9	4839768	4861075	chr9:4839768-4861075	1	+	4841205	4860275	789624	5	91,156,157,104,951,	0,1433,4756,9678,20356,
#Partially deleted in new
chr9	4839776	4849550	chr9:4839776-4849550	0	+	4841205	4849550	789624	4	83,153,157,104,	0,1428,4748,9670,
#Deleted in new
chr9	4850296	4850375	chr9:4850296-4850375	3	+	4850296	4850296	5263520	1	79,	0,
#Deleted in new
chr9	4850298	4850373	chr9:4850298-4850373	3	-	4850298	4850298	8553170	1	75,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	4860453	4885917	chr9:4860453-4885917	0	+	4860453	4860453	8553170	2	448,1430,	0,24034,
#Partially deleted in new
chr9	4944669	4945902	chr9:4944669-4945902	7	-	4944669	4944669	16724991	2	681,247,	0,986,
#Partially deleted in new
chr9	4984389	5078444	chr9:4984389-5078444	0	+	5021987	5078444	789624	16	376,83,251,124,118,146,322,120,158,112,187,128,135,88,128,139,	0,1550,37573,45393,60013,66296,70173,71279,80493,82288,84632,85535,88102,89308,93063,93916,
#Partially deleted in new
chr9	4985032	5022065	chr9:4985032-5022065	0	+	5021987	5022065	789624	3	141,83,103,	0,907,36930,
#Partially deleted in new
chr9	4985244	5128183	chr9:4985244-5128183	3	+	5021987	5126791	0	25	386,83,251,124,118,146,322,120,158,112,187,128,135,88,128,139,152,151,137,190,125,173,118,114,1500,	0,695,36718,44538,59158,65441,69318,70424,79638,81433,83777,84680,87247,88453,92208,93061,94984,95288,96480,104429,105201,105494,137759,141088,141439,
#Partially deleted in new
chr9	5040944	5041940	chr9:5040944-5041940	7	+	5040944	5040944	16724991	2	647,308,	0,688,
#Deleted in new
chr9	5084998	5086112	chr9:5084998-5086112	7	-	5084998	5084998	16724991	1	1114,	0,
#Deleted in new
chr9	5091092	5091604	chr9:5091092-5091604	7	+	5091092	5091092	16724991	1	512,	0,
#Deleted in new
chr9	5094138	5095014	chr9:5094138-5095014	7	+	5094138	5094138	16724991	1	876,	0,
#Deleted in new
chr9	5096665	5098193	chr9:5096665-5098193	7	+	5096665	5096665	16724991	1	1528,	0,
#Partially deleted in new
chr9	5098340	5099325	chr9:5098340-5099325	7	+	5098340	5098340	16724991	2	355,325,	0,660,
#Deleted in new
chr9	5099559	5100229	chr9:5099559-5100229	7	+	5099559	5099559	16724991	1	670,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	5100235	5101009	chr9:5100235-5101009	7	+	5100235	5100235	16724991	1	774,	0,
#Deleted in new
chr9	5107936	5109290	chr9:5107936-5109290	7	+	5107936	5107936	16724991	1	1354,	0,
#Deleted in new
chr9	5109495	5110762	chr9:5109495-5110762	7	+	5109495	5109495	16724991	1	1267,	0,
#Deleted in new
chr9	5110912	5112849	chr9:5110912-5112849	7	+	5110912	5110912	16724991	1	1937,	0,
#Deleted in new
chr9	5113548	5114804	chr9:5113548-5114804	7	+	5113548	5113548	16724991	1	1256,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	5123879	5185647	chr9:5123879-5185647	1	-	5133434	5185602	8553170	4	632,168,87,334,	0,9545,40299,61434,
#Deleted in new
chr9	5125964	5126974	chr9:5125964-5126974	0	+	5125964	5125964	8553170	2	482,291,	0,719,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	5131978	5164251	chr9:5131978-5164251	0	-	5131978	5131978	8553170	4	163,39,168,73,	0,827,1446,32200,
#Partially deleted in new
chr9	5163862	5185668	chr9:5163862-5185668	3	-	5163912	5185602	789624	2	403,355,	0,21451,
#Deleted in new
chr9	5193338	5193558	chr9:5193338-5193558	7	-	5193338	5193338	16724991	1	220,	0,
#Deleted in new
chr9	5231418	5235304	chr9:5231418-5235304	3	+	5231523	5233877	789624	2	301,1651,	0,2235,
#Partially deleted in new
chr9	5299867	5304969	chr9:5299867-5304969	3	-	5300097	5304580	0	2	577,600,	0,4502,
#Partially deleted in new
chr9	5299875	5304432	chr9:5299875-5304432	0	-	5300402	5304432	789624	3	569,101,63,	0,4220,4494,
#Partially deleted in new
chr9	5311443	5311716	chr9:5311443-5311716	7	+	5311443	5311443	16724991	1	273,	0,
#Partially deleted in new
chr9	5334968	5339873	chr9:5334968-5339873	3	-	5335250	5339746	789624	2	629,338,	0,4567,
#Partially deleted in new
chr9	5334968	5339396	chr9:5334968-5339396	0	-	5334968	5334968	8553170	2	629,135,	0,4293,
#Partially deleted in new
chr9	5351795	5352410	chr9:5351795-5352410	3	-	5351795	5351795	8553170	1	615,	0,
#Partially deleted in new
chr9	5356311	5356525	chr9:5356311-5356525	7	-	5356311	5356311	16724991	1	214,	0,
#Partially deleted in new
chr9	5357972	5437878	chr9:5357972-5437878	3	-	5358238	5431977	789624	6	388,110,131,87,126,90,	0,3105,3785,73924,78596,79816,
#Partially deleted in new
chr9	5361757	5437867	chr9:5361757-5437867	0	-	5361757	5361757	8553170	5	131,169,87,126,79,	0,20105,70139,74811,76031,
#Partially deleted in new
chr9	5361780	5437706	chr9:5361780-5437706	0	-	5361780	5361780	8553170	4	108,87,126,75,	0,70116,74788,75851,
#Partially deleted in new
chr9	5392332	5436694	chr9:5392332-5436694	0	-	5392332	5392332	8553170	3	317,87,126,	0,39564,44236,
#Partially deleted in new
chr9	5418372	5418976	chr9:5418372-5418976	7	-	5418372	5418372	16724991	1	604,	0,
#Partially deleted in new
chr9	5450502	5470566	chr9:5450502-5470566	1	+	5456113	5467862	0	6	94,66,288,108,60,2727,	0,5597,12331,14996,16267,17337,
#Partially deleted in new
chr9	5450524	5470547	chr9:5450524-5470547	3	+	5456113	5467862	0	7	72,66,342,288,108,60,2708,	0,5575,6554,12309,14974,16245,17315,
#Partially deleted in new
chr9	5456113	5467866	chr9:5456113-5467866	0	+	5456113	5456113	8553170	7	52,342,135,47,41,60,27,	0,965,6720,6961,9385,10656,11726,
#Partially deleted in new
chr9	5457383	5463238	chr9:5457383-5463238	0	+	5457383	5457383	8553170	2	37,405,	0,5450,
#Partially deleted in new
chr9	5462934	5465912	chr9:5462934-5465912	0	+	5462934	5462934	8553170	2	187,414,	0,2564,
#Partially deleted in new
chr9	5510569	5571254	chr9:5510569-5571254	3	+	5522546	5569959	789624	7	234,69,306,270,135,50,1301,	0,11963,24175,38765,47048,52592,59384,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	5584489	5588994	chr9:5584489-5588994	3	+	5584489	5584489	8553170	2	356,402,	0,4103,
#Partially deleted in new
chr9	5629024	5769674	chr9:5629024-5769674	1	+	5629309	5769330	789624	22	429,108,80,108,143,137,92,89,145,49,153,204,39,111,90,161,139,120,729,159,137,705,	0,27558,60934,84871,91157,91589,103363,109425,113844,114664,116906,118277,124175,124511,125816,127187,128288,133516,134115,136389,136637,139945,
#Partially deleted in new
chr9	5629118	5776557	chr9:5629118-5776557	3	+	5629309	5774246	789624	26	335,108,80,108,143,137,92,89,145,49,153,204,39,111,90,161,139,120,729,159,137,287,192,178,189,2600,	0,27464,60840,84777,91063,91495,103269,109331,113750,114570,116812,118183,124081,124417,125722,127093,128194,133422,134021,136295,136543,139851,140968,143445,143773,144839,
#Partially deleted in new
chr9	5629118	5776552	chr9:5629118-5776552	1	+	5629309	5774246	789624	25	335,108,80,108,143,137,92,89,145,49,153,204,39,90,161,139,120,729,159,137,287,192,178,189,2595,	0,27464,60840,84777,91063,91495,103269,109331,113750,114570,116812,118183,124081,125722,127093,128194,133422,134021,136295,136543,139851,140968,143445,143773,144839,
#Partially deleted in new
chr9	5656653	5774298	chr9:5656653-5774298	0	+	5656653	5774246	789624	24	37,80,108,143,137,92,89,145,49,153,204,39,90,161,139,120,729,159,137,287,192,178,189,341,	0,33305,57242,63528,63960,75734,81796,86215,87035,89277,90648,96546,98187,99558,100659,105887,106486,108760,109008,112316,113433,115910,116238,117304,
#Partially deleted in new
chr9	5712844	5769106	chr9:5712844-5769106	0	+	5712844	5712844	8553170	18	1159,143,137,92,89,145,49,153,204,130,90,161,139,120,729,159,137,137,	0,7337,7769,19543,25605,30024,30844,33086,34457,35740,41996,43367,44468,49696,50295,52569,52817,56125,
#Partially deleted in new
chr9	5719020	5720244	chr9:5719020-5720244	3	-	5719020	5719020	8553170	2	478,65,	0,1159,
#Partially deleted in new
chr9	5763396	5775238	chr9:5763396-5775238	0	+	5763396	5768987	789624	6	472,287,192,178,189,1281,	0,5573,6690,9167,9495,10561,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr9	5765075	5833070	chr9:5765075-5833070	0	-	5787143	5833027	789624	16	713,248,164,116,203,153,191,175,221,213,93,147,106,128,302,381,	0,21985,22354,32741,33730,36100,39951,40535,44935,46035,47049,47813,58820,60016,65651,67614,
#Partially deleted in new
chr9	5770205	5773204	chr9:5770205-5773204	0	+	5770205	5773084	789624	3	73,178,313,	0,2358,2686,
#Partially deleted in new
chr9	5784570	5832841	chr9:5784570-5832841	0	-	5784570	5784570	8553170	14	2738,164,116,203,153,191,175,221,213,93,147,106,302,152,	0,2859,13246,14235,16605,20456,21040,25440,26540,27554,28318,39325,46156,48119,
#Partially deleted in new
chr9	5784572	5833117	chr9:5784572-5833117	3	-	5787143	5833027	789624	15	2736,164,116,203,153,191,175,221,213,93,147,106,128,302,428,	0,2857,13244,14233,16603,20454,21038,25438,26538,27552,28316,39323,40519,46154,48117,
#Partially deleted in new
chr9	5787034	5832957	chr9:5787034-5832957	0	-	5801323	5825187	789624	14	274,164,116,203,153,175,221,213,93,147,106,128,302,504,	0,395,10782,11771,14141,18576,22976,24076,25090,25854,36861,38057,43692,45419,
#Partially deleted in new
chr9	5812736	5833073	chr9:5812736-5833073	0	-	5812736	5812736	8553170	5	299,106,128,302,384,	0,11159,12355,17990,19953,
#Deleted in new
chr9	5855780	5856426	chr9:5855780-5856426	7	-	5855780	5855780	16724991	1	646,	0,
#Partially deleted in new
chr9	5881595	5921097	chr9:5881595-5921097	0	-	5913994	5921097	789624	4	80,93,205,554,	0,29019,32262,38948,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	5890801	5910606	chr9:5890801-5910606	3	+	5892474	5908708	0	5	135,102,97,114,1967,	0,1648,6755,16083,17838,
#Partially deleted in new
chr9	5890907	5908943	chr9:5890907-5908943	1	+	5892474	5908708	0	6	29,145,102,97,114,304,	0,147,1542,6649,15977,17732,
#Partially deleted in new
chr9	5890921	5908945	chr9:5890921-5908945	1	+	5892474	5908708	0	5	381,102,97,114,306,	0,1528,6635,15963,17718,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	5892510	5907194	chr9:5892510-5907194	0	+	5892510	5892510	8553170	3	41,97,310,	0,5046,14374,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	5897563	5907189	chr9:5897563-5907189	0	+	5897563	5897563	8553170	3	90,106,305,	0,517,9321,
#Partially deleted in new
chr9	5898936	5913860	chr9:5898936-5913860	0	-	5898936	5898936	8553170	3	319,93,3,	0,11678,14921,
#Partially deleted in new
chr9	5919007	6007787	chr9:5919007-6007787	3	-	5919683	6007787	789624	8	4302,188,116,90,80,1418,201,593,	0,5650,10036,25863,35008,49011,69337,88187,
#Partially deleted in new
chr9	5919021	6007787	chr9:5919021-6007787	1	-	5919683	6007787	789624	7	4288,188,116,80,1418,201,593,	0,5636,10022,34994,48997,69323,88173,
#Partially deleted in new
chr9	5919631	5968081	chr9:5919631-5968081	0	-	5929128	5968081	789624	7	3678,188,116,131,90,80,63,	0,5026,9412,14119,25239,34384,48387,
#Partially deleted in new
chr9	5968176	6007901	chr9:5968176-6007901	0	-	5968176	6007787	789624	2	1260,707,	0,39018,
#Deleted in new
chr9	6007825	6007904	chr9:6007825-6007904	3	+	6007825	6007825	5263520	1	79,	0,
#Deleted in new
chr9	6011042	6015618	chr9:6011042-6015618	3	-	6012289	6015607	789624	1	4576,	0,
#Deleted in new
chr9	6013497	6015612	chr9:6013497-6015612	1	-	6014285	6015607	789624	2	859,141,	0,1974,
#Deleted in new
chr9	6013865	6015625	chr9:6013865-6015625	0	-	6013865	6015607	789624	2	491,213,	0,1547,
#Partially deleted in new
chr9	6047359	6066714	chr9:6047359-6066714	3	+	6047359	6047359	8553170	2	149,350,	0,19005,
#Partially deleted in new
chr9	6195933	6197248	chr9:6195933-6197248	7	+	6195933	6195933	16724991	2	913,91,	0,1224,
#Partially deleted in new
chr9	6215785	6257982	chr9:6215785-6257982	1	+	6241694	6256168	0	5	67,102,51,92,2015,	0,25898,37766,38676,40182,
#Partially deleted in new
chr9	6241679	6256223	chr9:6241679-6256223	1	+	6241694	6256168	0	6	106,126,126,51,92,256,	0,8794,11186,11872,12782,14288,
#Partially deleted in new
chr9	6241681	6257983	chr9:6241681-6257983	3	+	6241694	6256168	0	7	104,126,126,126,51,92,2016,	0,8792,9458,11184,11870,12780,14286,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	6241692	6242734	chr9:6241692-6242734	0	+	6241692	6241692	8553170	2	93,543,	0,499,
#Partially deleted in new
chr9	6241694	6257982	chr9:6241694-6257982	1	+	6241694	6256168	0	6	91,126,126,51,92,2015,	0,8779,9445,11857,12767,14273,
#Deleted in new
chr9	6276639	6276974	chr9:6276639-6276974	7	+	6276639	6276639	16724991	1	335,	0,
#Partially deleted in new
chr9	6278666	6279153	chr9:6278666-6279153	7	+	6278666	6278666	16724991	1	487,	0,
#Deleted in new
chr9	6328374	6330670	chr9:6328374-6330670	3	+	6328595	6329018	789624	1	2296,	0,
#Deleted in new
chr9	6328374	6330914	chr9:6328374-6330914	1	+	6328595	6330213	789624	2	588,733,	0,1807,
#Deleted in new
chr9	6328403	6331900	chr9:6328403-6331900	1	+	6328595	6331019	789624	2	559,925,	0,2572,
#Partially deleted in new
chr9	6413150	6507054	chr9:6413150-6507054	0	+	6413490	6492317	0	17	493,231,260,219,110,187,124,108,105,99,107,163,141,97,158,99,1022,	0,7761,20763,47422,62240,64471,68492,68841,73670,79152,80675,84047,84867,86684,87401,91442,92882,
#Partially deleted in new
chr9	6413192	6434348	chr9:6413192-6434348	0	+	6413192	6413192	8553170	4	163,161,231,435,	0,290,7719,20721,
#Partially deleted in new
chr9	6413322	6507054	chr9:6413322-6507054	3	+	6413490	6506179	0	16	321,231,260,219,110,187,124,108,105,107,163,141,97,158,99,1022,	0,7589,20591,47250,62068,64299,68320,68669,73498,80503,83875,84695,86512,87229,91270,92710,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	6413417	6422979	chr9:6413417-6422979	1	+	6413490	6422661	789624	3	226,231,345,	0,7494,9217,
#Partially deleted in new
chr9	6413776	6460581	chr9:6413776-6460581	0	+	6413776	6413776	8553170	4	135,231,260,9,	0,7135,20137,46796,
#Partially deleted in new
chr9	6414057	6434025	chr9:6414057-6434025	0	+	6414057	6414057	8553170	3	111,231,112,	0,6854,19856,
#Partially deleted in new
chr9	6415144	6449558	chr9:6415144-6449558	3	-	6415144	6415144	8553170	2	419,219,	0,34195,
#Partially deleted in new
chr9	6421030	6477654	chr9:6421030-6477654	0	+	6460597	6477654	789624	4	112,219,110,33,	0,39542,54360,56591,
#Partially deleted in new
chr9	6434087	6495998	chr9:6434087-6495998	0	+	6434087	6434087	8553170	8	86,219,110,187,124,108,105,2173,	0,26485,41303,43534,47555,47904,52733,59738,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	6482050	6492844	chr9:6482050-6492844	0	+	6482050	6482050	8553170	4	49,90,105,542,	0,2546,4770,10252,
#Partially deleted in new
chr9	6486870	6507054	chr9:6486870-6507054	0	+	6486870	6486870	8553170	10	55,99,107,1519,163,141,97,158,99,1022,	0,5432,6955,8714,10327,11147,12964,13681,17722,19162,
#Deleted in new
chr9	6497048	6498150	chr9:6497048-6498150	0	+	6497048	6497048	8553170	3	55,71,133,	0,149,969,
#Partially deleted in new
chr9	6498351	6507054	chr9:6498351-6507054	0	+	6498351	6498351	8553170	4	1580,158,99,1022,	0,2200,6241,7681,
#Partially deleted in new
chr9	6504349	6506112	chr9:6504349-6506112	0	+	6504349	6504349	8553170	2	342,80,	0,1683,
#Partially deleted in new
chr9	6532463	6645783	chr9:6532463-6645783	3	-	6533016	6645499	789624	25	697,81,173,96,112,142,113,150,126,76,143,42,85,98,81,140,106,97,197,148,78,165,136,79,539,	0,2244,3600,7587,18339,20904,22205,23689,26095,32890,54677,55937,56154,56731,59679,60387,62550,69645,72124,72667,74128,77728,87720,112150,112781,
#Partially deleted in new
chr9	6532466	6554929	chr9:6532466-6554929	1	-	6533016	6554685	789624	7	694,81,173,96,112,142,261,	0,2241,3597,7584,18336,20901,22202,
#Partially deleted in new
chr9	6532466	6566517	chr9:6532466-6566517	0	-	6532466	6532466	8553170	11	694,81,173,96,112,142,113,150,126,76,89,	0,2241,3597,7584,18336,20901,22202,23686,26092,32887,33962,
#Partially deleted in new
chr9	6532468	6567462	chr9:6532468-6567462	0	-	6532468	6532468	8553170	11	692,81,173,96,112,142,113,150,126,76,285,	0,2239,3595,7582,18334,20899,22200,23684,26090,32885,34709,
#Partially deleted in new
chr9	6532481	6644564	chr9:6532481-6644564	0	-	6532481	6532481	8553170	24	679,81,173,96,112,142,113,150,126,76,143,42,85,98,81,140,106,97,197,148,78,165,136,34,	0,2226,3582,7569,18321,20886,22187,23671,26077,32872,54659,55919,56136,56713,59661,60369,62532,69627,72106,72649,74110,77710,87702,112049,
#Partially deleted in new
chr9	6532502	6565498	chr9:6532502-6565498	1	-	6533016	6565479	789624	10	658,81,173,96,112,142,113,150,126,145,	0,2205,3561,7548,18300,20865,22166,23650,26056,32851,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	6532506	6541816	chr9:6532506-6541816	0	-	6532506	6532506	8553170	4	654,81,173,1766,	0,2201,3557,7544,
#Partially deleted in new
chr9	6532508	6644791	chr9:6532508-6644791	0	-	6532508	6532508	8553170	23	652,81,173,96,112,142,113,150,126,76,143,42,85,98,81,140,106,97,197,148,78,165,178,	0,2199,3555,7542,18294,20859,22160,23644,26050,32845,54632,55892,56109,56686,59634,60342,62505,69600,72079,72622,74083,77683,112105,
#Partially deleted in new
chr9	6532556	6565861	chr9:6532556-6565861	1	-	6533016	6565479	789624	9	604,81,173,112,142,113,150,126,508,	0,2151,3507,18246,20811,22112,23596,26002,32797,
#Partially deleted in new
chr9	6532652	6585075	chr9:6532652-6585075	0	-	6532652	6532652	8553170	11	508,81,173,96,112,142,113,150,126,76,37,	0,2055,3411,7398,18150,20715,22016,23500,25906,32701,52386,
#Partially deleted in new
chr9	6532898	6540179	chr9:6532898-6540179	0	-	6532898	6532898	8553170	4	262,81,290,129,	0,1809,3048,7152,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr9	6532920	6606149	chr9:6532920-6606149	0	-	6532920	6532920	8553170	21	240,81,173,96,112,142,113,150,126,76,143,42,85,98,81,140,106,97,197,148,281,	0,1787,3143,7130,17882,20447,21748,23232,25638,32433,54220,55480,55697,56274,59222,59930,62093,69188,71667,72210,72948,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	6542093	6542353	chr9:6542093-6542353	3	+	6542093	6542093	8553170	1	260,	0,
#Partially deleted in new
chr9	6557665	6644830	chr9:6557665-6644830	0	-	6557665	6557665	8553170	16	1019,76,143,42,85,98,81,140,106,97,197,148,78,165,136,217,	0,7688,29475,30735,30952,31529,34477,35185,37348,44443,46922,47465,48926,52526,62518,86948,
#Partially deleted in new
chr9	6557919	6565439	chr9:6557919-6565439	0	-	6557919	6557919	8553170	3	174,126,86,	0,639,7434,
#Partially deleted in new
chr9	6558471	6565560	chr9:6558471-6565560	1	-	6558489	6565479	789624	2	213,207,	0,6882,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	6568843	6569360	chr9:6568843-6569360	7	+	6568843	6568843	16724991	1	517,	0,
#Partially deleted in new
chr9	6589206	6605272	chr9:6589206-6605272	0	-	6595048	6605272	789624	6	86,81,140,106,97,142,	0,2936,3644,5807,12902,15924,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	6591847	6593094	chr9:6591847-6593094	0	-	6591847	6591847	8553170	2	376,244,	0,1003,
#Partially deleted in new
chr9	6592850	6604797	chr9:6592850-6604797	0	-	6592850	6592850	8553170	4	140,106,97,210,	0,2163,9258,11737,
#Partially deleted in new
chr9	6595027	6605370	chr9:6595027-6605370	0	-	6595027	6605238	789624	4	92,97,197,240,	0,7081,9560,10103,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	6605275	6623002	chr9:6605275-6623002	0	-	6605275	6622824	789624	5	3,78,165,136,218,	0,1316,4916,14908,17509,
#Deleted in new
chr9	6639138	6639604	chr9:6639138-6639604	7	+	6639138	6639138	16724991	1	466,	0,
#Partially deleted in new
chr9	6645955	6670635	chr9:6645955-6670635	3	+	6645955	6645955	8553170	3	130,185,211,	0,23588,24469,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	6661650	6661942	chr9:6661650-6661942	3	+	6661650	6661650	8553170	1	292,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	6662423	6663792	chr9:6662423-6663792	7	+	6662423	6662423	16724991	3	387,211,136,	0,732,1233,
#Deleted in new
chr9	6668998	6670008	chr9:6668998-6670008	7	-	6668998	6668998	16724991	1	1010,	0,
#Deleted in new
chr9	6675283	6675614	chr9:6675283-6675614	7	+	6675283	6675283	16724991	1	331,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	6704470	6707780	chr9:6704470-6707780	3	+	6704470	6704470	8553170	2	183,239,	0,3071,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	6716494	6724011	chr9:6716494-6724011	1	+	6716494	6716494	8553170	6	122,1109,84,135,78,485,	0,1378,2576,4368,4602,7032,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	6716547	6723630	chr9:6716547-6723630	0	+	6716547	6716547	8553170	5	69,1109,84,135,104,	0,1325,2523,4315,6979,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	6718809	6719370	chr9:6718809-6719370	0	+	6718809	6718809	8553170	2	172,300,	0,261,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	6718964	6727438	chr9:6718964-6727438	3	+	6718964	6718964	8553170	5	17,84,135,117,493,	0,106,1898,7538,7981,
#Partially deleted in new
chr9	6720862	7077263	chr9:6720862-7077263	1	+	6720948	7076451	0	18	135,161,176,115,194,50,104,138,194,239,323,109,182,214,77,56,109,830,	0,72109,84736,93768,128644,159149,167097,172232,260062,263303,265481,269553,290835,292925,294990,325999,328229,355571,
#Deleted in new
chr9	6734597	6735076	chr9:6734597-6735076	7	-	6734597	6734597	16724991	1	479,	0,
#Deleted in new
chr9	6748702	6748981	chr9:6748702-6748981	7	-	6748702	6748702	16724991	1	279,	0,
#Partially deleted in new
chr9	6757640	7014337	chr9:6757640-7014337	0	+	6792988	6981848	789624	15	563,161,176,115,194,50,104,138,194,924,239,323,109,182,550,	0,35331,47958,56990,91866,122371,130319,135454,223284,224201,226525,228703,232775,254057,256147,
#Partially deleted in new
chr9	6757653	6815149	chr9:6757653-6815149	1	+	6792988	6814766	789624	4	550,161,176,519,	0,35318,47945,56977,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr9	6757655	7170932	chr9:6757655-7170932	1	+	6792988	7170040	0	21	548,161,176,115,194,50,104,138,194,239,323,109,182,214,77,56,109,186,171,120,1135,	0,35316,47943,56975,91851,122356,130304,135439,223269,226510,228688,232760,254042,256132,258197,289206,291436,346029,370410,407582,412142,
#Partially deleted in new
chr9	6757655	7175648	chr9:6757655-7175648	3	+	6792988	7174729	0	22	548,161,176,115,194,50,104,138,194,239,323,109,182,214,77,56,109,186,171,120,93,1096,	0,35316,47943,56975,91851,122356,130304,135439,223269,226510,228688,232760,254042,256132,258197,289206,291436,346029,370410,407582,412142,416897,
#Partially deleted in new
chr9	6758102	6893632	chr9:6758102-6893632	0	+	6758102	6758102	8553170	8	101,161,176,115,194,50,104,538,	0,34869,47496,56528,91404,121909,129857,134992,
#Partially deleted in new
chr9	6758142	7077263	chr9:6758142-7077263	1	+	6792988	7076451	0	18	61,161,176,115,194,50,104,138,194,239,323,109,182,214,77,56,109,830,	0,34829,47456,56488,91364,121869,129817,134952,222782,226023,228201,232273,253555,255645,257710,288719,290949,318291,
#Partially deleted in new
chr9	6805616	6819079	chr9:6805616-6819079	0	+	6805616	6805616	8553170	3	158,115,132,	0,9014,13331,
#Deleted in new
chr9	6834455	6835577	chr9:6834455-6835577	7	+	6834455	6834455	16724991	1	1122,	0,
#Partially deleted in new
chr9	6893122	6948214	chr9:6893122-6948214	0	+	6893122	6893122	8553170	4	110,230,175,182,	0,48463,49337,54910,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	6902669	6978859	chr9:6902669-6978859	3	+	6902669	6902669	8553170	4	83,61,174,235,	0,71157,72096,75955,
#Partially deleted in new
chr9	6925500	7175347	chr9:6925500-7175347	1	+	6980942	7174729	789624	15	171,194,239,323,109,182,214,77,56,109,186,171,120,93,795,	0,55424,58665,60843,64915,86197,88287,90352,121361,123591,178184,202565,239737,244297,249052,
#Partially deleted in new
chr9	6984280	6986866	chr9:6984280-6986866	0	+	6984280	6984280	8553170	2	124,523,	0,2063,
#Partially deleted in new
chr9	7013787	7169829	chr9:7013787-7169829	0	+	7013787	7169829	789624	9	214,77,56,109,186,99,171,120,32,	0,2065,33074,35304,89897,91614,114278,151450,156010,
#Partially deleted in new
chr9	7049191	7104017	chr9:7049191-7104017	0	+	7049191	7049191	8553170	2	9,333,	0,54493,
#Partially deleted in new
chr9	7104267	7170212	chr9:7104267-7170212	0	+	7104267	7104267	8553170	4	87,171,120,415,	0,23798,60970,65530,
#Partially deleted in new
chr9	7127906	7169884	chr9:7127906-7169884	0	+	7127906	7127906	8553170	3	330,120,87,	0,37331,41891,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	7177576	7203458	chr9:7177576-7203458	3	+	7177576	7177576	8553170	2	590,725,	0,25157,
#Deleted in new
chr9	7477044	7478320	chr9:7477044-7478320	7	-	7477044	7477044	16724991	1	1276,	0,
#Deleted in new
chr9	7597822	7598377	chr9:7597822-7598377	7	+	7597822	7597822	16724991	1	555,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	7786104	7786688	chr9:7786104-7786688	3	-	7786104	7786104	8553170	1	584,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	7796489	7800067	chr9:7796489-7800067	3	-	7798572	7799734	789624	2	2148,607,	0,2971,
#Deleted in new
chr9	7798198	7800148	chr9:7798198-7800148	0	-	7798198	7798198	8553170	2	439,108,	0,1842,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	7798343	7888380	chr9:7798343-7888380	0	-	7798343	7798343	8553170	3	294,82,82,	0,35581,89955,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	7930826	7935137	chr9:7930826-7935137	3	-	7930826	7930826	8553170	3	72,86,38,	0,1258,4273,
#Deleted in new
chr9	7960412	7961080	chr9:7960412-7961080	3	-	7960412	7960412	8553170	2	250,251,	0,417,
#Partially deleted in new
chr9	8314245	10033790	chr9:8314245-10033790	3	-	8317873	8733843	0	43	3697,136,155,126,127,179,286,155,120,176,124,98,113,161,210,91,260,98,588,118,27,194,306,145,134,582,270,12,111,18,9,189,142,146,167,39,60,34,50,39,42,104,73,	0,5585,17336,24676,26097,26844,27447,61690,62361,74986,90291,122346,135479,146165,151220,156749,169873,170981,171516,178616,182996,185401,186508,190015,193055,203602,207031,209267,210679,212381,213099,214345,319071,322453,419534,704451,869058,1083203,1260486,1420287,1452564,1624261,1719472,
#Partially deleted in new
chr9	8314246	8733946	chr9:8314246-8733946	1	-	8317873	8733843	0	31	3696,136,155,126,127,179,286,155,120,176,124,98,113,15,161,210,91,260,98,145,134,582,270,12,111,18,9,189,142,146,167,	0,5584,17335,24675,26096,26843,27446,61689,62360,74985,90290,122345,135478,140333,146164,151219,156748,169872,170980,190014,193054,203601,207030,209266,210678,212380,213098,214344,319070,322452,419533,
#Partially deleted in new
chr9	8314246	8733949	chr9:8314246-8733949	1	-	8317873	8733843	0	35	3696,136,155,126,127,179,286,155,120,176,124,98,113,161,210,91,260,98,588,118,27,194,306,145,134,582,270,12,111,18,9,189,142,146,170,	0,5584,17335,24675,26096,26843,27446,61689,62360,74985,90290,122345,135478,146164,151219,156748,169872,170980,171515,178615,182995,185400,186507,190014,193054,203601,207030,209266,210678,212380,213098,214344,319070,322452,419533,
#Partially deleted in new
chr9	8314246	8733949	chr9:8314246-8733949	1	-	8317873	8733843	0	30	3696,136,155,126,127,179,286,155,120,176,124,98,113,12,161,210,91,260,98,145,134,582,270,12,111,18,189,142,146,170,	0,5584,17335,24675,26096,26843,27446,61689,62360,74985,90290,122345,135478,140333,146164,151219,156748,169872,170980,190014,193054,203601,207030,209266,210678,212380,214344,319070,322452,419533,
#Partially deleted in new
chr9	8314246	8733946	chr9:8314246-8733946	1	-	8317873	8733843	789624	29	3696,136,155,126,127,179,286,155,120,176,124,98,42,113,161,210,91,260,98,145,134,582,270,112,8,189,142,146,167,	0,5584,17335,24675,26096,26843,27446,61689,62360,74985,90290,122345,122951,135478,146164,151219,156748,169872,170980,190014,193054,203601,207030,210678,210792,214344,319070,322452,419533,
#Partially deleted in new
chr9	8314246	8733949	chr9:8314246-8733949	1	-	8317873	8733843	789624	29	3696,136,155,126,127,179,286,155,120,176,124,98,113,161,210,91,260,101,145,134,582,270,12,111,9,189,142,146,170,	0,5584,17335,24675,26096,26843,27446,61689,62360,74985,90290,122345,135478,146164,151219,156748,169872,170980,190014,193054,203601,207030,209266,210678,213098,214344,319070,322452,419533,
#Partially deleted in new
chr9	8317276	8733949	chr9:8317276-8733949	1	-	8317873	8733843	0	36	195,239,136,155,126,127,179,286,155,120,176,124,98,113,161,210,91,260,98,588,118,27,194,306,145,134,582,270,12,111,18,9,189,142,146,170,	0,427,2554,14305,21645,23066,23813,24416,58659,59330,71955,87260,119315,132448,143134,148189,153718,166842,167950,168485,175585,179965,182370,183477,186984,190024,200571,204000,206236,207648,209350,210068,211314,316040,319422,416503,
#Partially deleted in new
chr9	8317403	8733894	chr9:8317403-8733894	1	-	8317873	8733843	0	31	539,136,155,126,127,179,286,155,120,176,124,98,113,12,161,210,91,260,98,145,134,582,270,12,111,18,9,189,142,146,115,	0,2427,14178,21518,22939,23686,24289,58532,59203,71828,87133,119188,132321,137176,143007,148062,153591,166715,167823,186857,189897,200444,203873,206109,207521,209223,209941,211187,315913,319295,416376,
#Partially deleted in new
chr9	8317404	8733894	chr9:8317404-8733894	1	-	8317873	8733843	0	29	538,136,155,126,127,179,286,155,120,176,124,98,42,113,161,210,91,260,98,145,134,582,270,111,9,189,142,146,115,	0,2426,14177,21517,22938,23685,24288,58531,59202,71827,87132,119187,119793,132320,143006,148061,153590,166714,167822,186856,189896,200443,203872,207520,209940,211186,315912,319294,416375,
#Partially deleted in new
chr9	8436646	8484259	chr9:8436646-8484259	0	-	8436646	8484259	789624	8	43,120,113,12,161,210,91,141,	0,2054,13078,17933,23764,28819,34348,47472,
#Deleted in new
chr9	8484237	8485636	chr9:8484237-8485636	0	-	8484237	8484237	8553170	2	141,410,	0,989,
#Partially deleted in new
chr9	8485762	8501059	chr9:8485762-8501059	0	-	8485762	8485762	8553170	4	587,118,194,306,	0,7099,13884,14991,
#Partially deleted in new
chr9	8524948	8633460	chr9:8524948-8633460	0	-	8524948	8524948	8553170	3	87,189,144,	0,3642,108368,
#Partially deleted in new
chr9	8528151	10612723	chr9:8528151-10612723	1	-	8528424	8733843	789624	17	341,189,142,146,167,39,60,34,72,50,39,42,104,73,55,108,36,	0,439,105165,108547,205628,490545,655152,869297,886600,1046580,1206381,1238658,1410355,1505566,1812811,2084246,2084536,
#Partially deleted in new
chr9	8633389	8857776	chr9:8633389-8857776	0	-	8633389	8733843	789624	4	69,146,167,139,	0,3309,100390,224248,
#Deleted in new
chr9	8713310	8713841	chr9:8713310-8713841	7	+	8713310	8713310	16724991	1	531,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	8797134	8797194	chr9:8797134-8797194	3	+	8797134	8797134	8553170	1	60,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	8858129	8862255	chr9:8858129-8862255	0	+	8858129	8858129	8553170	2	194,1474,	0,2652,
#Deleted in new
chr9	8858133	8861724	chr9:8858133-8861724	3	+	8858133	8858133	789624	2	190,1769,	0,1822,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	8936078	8963077	chr9:8936078-8963077	3	+	8936078	8936078	8553170	4	101,127,66,278,	0,22643,26045,26721,
#Deleted in new
chr9	9090897	9091245	chr9:9090897-9091245	7	+	9090897	9090897	16724991	1	348,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	9442059	9442380	chr9:9442059-9442380	3	+	9442059	9442059	8553170	1	321,	0,
#Partially deleted in new
chr9	9799422	9803784	chr9:9799422-9803784	3	+	9799422	9799422	789624	3	186,129,68,	0,1123,4294,
#Deleted in new
chr9	10532144	10532411	chr9:10532144-10532411	7	+	10532144	10532144	16724991	1	267,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	10613201	10620420	chr9:10613201-10620420	3	+	10613201	10613201	789624	3	225,53,2560,	0,3415,4659,
#Deleted in new
chr9	10631749	10632203	chr9:10631749-10632203	3	-	10631749	10631749	8553170	2	36,121,	0,333,
#Deleted in new
chr9	10777356	10777525	chr9:10777356-10777525	7	+	10777356	10777356	16724991	1	169,	0,
#Deleted in new
chr9	10829751	10830308	chr9:10829751-10830308	7	-	10829751	10829751	16724991	1	557,	0,
#Deleted in new
chr9	10948371	10948481	chr9:10948371-10948481	3	-	10948371	10948371	8553170	1	110,	0,
#Partially deleted in new
chr9	11011747	11013096	chr9:11011747-11013096	7	+	11011747	11011747	16724991	1	1349,	0,
#Partially deleted in new
chr9	11275313	11276314	chr9:11275313-11276314	3	-	11275313	11275313	8553170	2	223,62,	0,939,
#Deleted in new
chr9	11618495	11618621	chr9:11618495-11618621	7	-	11618495	11618495	16724991	1	126,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	11618529	12058227	chr9:11618529-12058227	3	+	11618529	11618529	8553170	6	102,102,113,71,61,428,	0,22203,166017,309339,437685,439270,
#Partially deleted in new
chr9	12098659	12159147	chr9:12098659-12159147	3	-	12098659	12098659	8553170	4	356,45,129,31,	0,18161,47613,60457,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	12287319	12288238	chr9:12287319-12288238	7	+	12287319	12287319	16724991	1	919,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	12300265	12300451	chr9:12300265-12300451	3	-	12300265	12300265	8553170	1	186,	0,
#Partially deleted in new
chr9	12685438	12694303	chr9:12685438-12694303	0	+	12693996	12694303	789624	2	157,392,	0,8473,
#Deleted in new
chr9	12693308	12694487	chr9:12693308-12694487	0	+	12693308	12693308	8553170	2	170,576,	0,603,
#Partially deleted in new
chr9	12693434	12710290	chr9:12693434-12710290	3	+	12693996	12709182	0	8	44,470,323,205,168,180,147,1314,	0,477,2080,5016,8836,11091,14562,15542,
#Partially deleted in new
chr9	12695719	12709235	chr9:12695719-12709235	1	+	12695794	12709182	789624	5	118,168,180,147,259,	0,6551,8806,12277,13257,
#Partially deleted in new
chr9	12698505	12709267	chr9:12698505-12709267	0	+	12698505	12698505	8553170	4	150,168,180,291,	0,3765,6020,10471,
#Partially deleted in new
chr9	12698553	12759743	chr9:12698553-12759743	1	-	12698553	12698553	8553170	2	802,192,	0,60998,
#Partially deleted in new
chr9	12700099	12814345	chr9:12700099-12814345	3	-	12700099	12700099	789624	4	527,73,146,53,	0,59452,90520,114193,
#Deleted in new
chr9	12701644	12702442	chr9:12701644-12702442	0	+	12701644	12701644	8553170	2	171,172,	0,626,
#Partially deleted in new
chr9	12707670	12709294	chr9:12707670-12709294	0	+	12707670	12707670	8553170	2	473,318,	0,1306,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	12764760	12765055	chr9:12764760-12765055	3	-	12764760	12764760	8553170	1	295,	0,
#Partially deleted in new
chr9	12775020	12822131	chr9:12775020-12822131	3	+	12775715	12821760	789624	2	1007,746,	0,46365,
#Deleted in new
chr9	12775667	12777578	chr9:12775667-12777578	0	+	12775667	12775667	8553170	2	360,379,	0,1532,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	12885320	12885417	chr9:12885320-12885417	3	+	12885320	12885320	8553170	1	97,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	12958502	13034326	chr9:12958502-13034326	3	-	12958502	12958502	8553170	6	1486,98,188,372,169,156,	0,3817,44932,46430,70906,75668,
#Deleted in new
chr9	12972842	12973438	chr9:12972842-12973438	7	-	12972842	12972842	16724991	1	596,	0,
#Deleted in new
chr9	13021693	13022892	chr9:13021693-13022892	7	-	13021693	13021693	16724991	1	1199,	0,
#Partially deleted in new
chr9	13105703	13279590	chr9:13105703-13279590	1	-	13106964	13250315	0	47	1408,124,113,105,123,44,91,87,148,194,84,146,175,75,93,81,91,92,197,163,99,111,178,93,105,199,124,282,168,117,210,186,165,147,110,72,184,89,115,210,129,214,140,210,167,73,191,	0,3232,4248,4932,6320,7307,8227,9544,13798,16035,16383,17449,19512,20812,20976,28120,30388,31008,32253,34283,37762,41844,44807,52314,56987,62662,70048,70432,77714,80566,83080,84410,86427,87463,90417,99332,100212,111070,111476,113855,115668,116529,117867,118670,141931,144596,173696,
#Partially deleted in new
chr9	13105705	13120650	chr9:13105705-13120650	0	-	13105705	13105705	8553170	7	1406,124,113,105,44,91,1149,	0,3230,4246,4930,7305,8225,13796,
#Partially deleted in new
chr9	13105709	13279564	chr9:13105709-13279564	3	-	13106964	13250315	0	46	1402,124,113,105,123,44,91,148,194,84,146,175,75,93,81,91,92,197,163,99,111,178,93,105,199,124,282,168,117,210,186,165,147,110,72,184,89,115,210,129,214,140,210,167,73,165,	0,3226,4242,4926,6314,7301,8221,13792,16029,16377,17443,19506,20806,20970,28114,30382,31002,32247,34277,37756,41838,44801,52308,56981,62656,70042,70426,77708,80560,83074,84404,86421,87457,90411,99326,100206,111064,111470,113849,115662,116523,117861,118664,141925,144590,173690,
#Partially deleted in new
chr9	13105711	13279564	chr9:13105711-13279564	1	-	13106964	13250315	0	46	1400,124,113,105,123,44,91,87,148,194,84,146,175,75,93,81,91,92,197,163,111,178,93,105,199,124,282,168,117,210,186,165,147,110,72,184,89,115,210,129,214,140,210,167,73,165,	0,3224,4240,4924,6312,7299,8219,9536,13790,16027,16375,17441,19504,20804,20968,28112,30380,31000,32245,34275,41836,44799,52306,56979,62654,70040,70424,77706,80558,83072,84402,86419,87455,90409,99324,100204,111062,111468,113847,115660,116521,117859,118662,141923,144588,173688,
#Partially deleted in new
chr9	13106490	13190177	chr9:13106490-13190177	0	-	13106490	13106490	8553170	29	621,124,113,105,123,44,91,87,148,194,84,146,175,75,93,2359,92,197,163,178,93,105,199,124,282,168,117,210,64,	0,2445,3461,4145,5533,6520,7440,8757,13011,15248,15596,16662,18725,20025,20189,27333,30221,31466,33496,44020,51527,56200,61875,69261,69645,76927,79779,82293,83623,
#Partially deleted in new
chr9	13106497	13175892	chr9:13106497-13175892	0	-	13106497	13106497	8553170	22	614,124,113,105,123,44,91,87,148,194,84,146,175,75,93,81,91,92,197,163,199,141,	0,2438,3454,4138,5526,6513,7433,8750,13004,15241,15589,16655,18718,20018,20182,27326,29594,30214,31459,33489,61868,69254,
#Partially deleted in new
chr9	13106497	13136181	chr9:13106497-13136181	0	-	13106964	13136181	789624	16	614,124,113,105,123,44,91,87,148,194,146,175,75,93,81,90,	0,2438,3454,4138,5526,6513,7433,8750,13004,15241,16655,18718,20018,20182,27326,29594,
#Partially deleted in new
chr9	13106571	13175824	chr9:13106571-13175824	0	-	13106964	13175824	789624	25	540,124,113,105,123,44,91,87,148,194,84,146,175,75,93,81,91,92,197,163,178,93,105,199,73,	0,2364,3380,4064,5452,6439,7359,8676,12930,15167,15515,16581,18644,19944,20108,27252,29520,30140,31385,33415,43939,51446,56119,61794,69180,
#Partially deleted in new
chr9	13106741	13165469	chr9:13106741-13165469	1	-	13106964	13162725	789624	25	370,124,113,105,123,44,91,87,148,194,84,146,175,75,93,81,91,92,197,163,111,178,93,105,103,	0,2194,3210,3894,5282,6269,7189,8506,12760,14997,15345,16411,18474,19774,19938,27082,29350,29970,31215,33245,40806,43769,51276,55949,58625,
#Partially deleted in new
chr9	13106858	13250358	chr9:13106858-13250358	1	-	13106964	13250315	0	44	253,124,113,105,123,44,91,148,194,84,146,175,75,93,81,91,92,197,163,111,178,93,105,199,124,282,168,117,210,186,165,147,110,72,184,89,115,210,129,214,140,210,167,59,	0,2077,3093,3777,5165,6152,7072,12643,14880,15228,16294,18357,19657,19821,26965,29233,29853,31098,33128,40689,43652,51159,55832,61507,68893,69277,76559,79411,81925,83255,85272,86308,89262,98177,99057,109915,110321,112700,114513,115374,116712,117515,140776,143441,
#Partially deleted in new
chr9	13106859	13250358	chr9:13106859-13250358	1	-	13106964	13250315	0	45	252,124,113,105,123,44,91,87,148,194,84,146,175,75,93,81,91,92,197,163,111,178,93,105,199,124,282,168,117,210,186,165,147,110,72,184,89,115,210,129,214,140,210,167,59,	0,2076,3092,3776,5164,6151,7071,8388,12642,14879,15227,16293,18356,19656,19820,26964,29232,29852,31097,33127,40688,43651,51158,55831,61506,68892,69276,76558,79410,81924,83254,85271,86307,89261,98176,99056,109914,110320,112699,114512,115373,116711,117514,140775,143440,
#Partially deleted in new
chr9	13106930	13140045	chr9:13106930-13140045	0	-	13139942	13140045	789624	20	181,124,113,105,123,44,91,87,148,194,84,146,175,75,93,81,91,92,197,141,	0,2005,3021,3705,5093,6080,7000,8317,12571,14808,15156,16222,18285,19585,19749,26893,29161,29781,31026,32974,
#Partially deleted in new
chr9	13106942	13279407	chr9:13106942-13279407	1	-	13106964	13250315	789624	48	169,124,113,105,123,44,91,87,148,194,84,146,175,75,93,81,91,92,197,163,99,111,178,93,105,42,199,124,282,168,117,210,186,165,147,110,72,184,89,115,210,129,214,140,210,167,73,8,	0,1993,3009,3693,5081,6068,6988,8305,12559,14796,15144,16210,18273,19573,19737,26881,29149,29769,31014,33044,36523,40605,43568,51075,55748,58424,61423,68809,69193,76475,79327,81841,83171,85188,86224,89178,98093,98973,109831,110237,112616,114429,115290,116628,117431,140692,143357,172457,
#Partially deleted in new
chr9	13115320	13123271	chr9:13115320-13123271	0	-	13121918	13123271	789624	5	14,148,216,84,119,	0,4181,6418,6766,7832,
#Partially deleted in new
chr9	13125215	13140070	chr9:13125215-13140070	0	-	13136176	13140070	789624	7	175,75,93,81,91,197,84,	0,1300,1464,8608,10876,12741,14771,
#Partially deleted in new
chr9	13136155	13140943	chr9:13136155-13140943	0	-	13136155	13136155	8553170	5	27,92,197,163,101,	0,556,1801,3831,4687,
#Partially deleted in new
chr9	13138047	13165507	chr9:13138047-13165507	0	-	13138047	13162725	789624	6	106,163,178,93,105,141,	0,1939,12463,19970,24643,27319,
#Partially deleted in new
chr9	13143484	13165458	chr9:13143484-13165458	0	-	13143484	13162725	789624	5	80,178,93,105,92,	0,7026,14533,19206,21882,
#Partially deleted in new
chr9	13205919	13219698	chr9:13205919-13219698	0	-	13217245	13219698	789624	4	180,89,115,43,	0,10854,11260,13736,
#Partially deleted in new
chr9	13274509	13279187	chr9:13274509-13279187	3	-	13274509	13274509	8553170	3	101,198,158,	0,2064,4520,
#Deleted in new
chr9	13322805	13323450	chr9:13322805-13323450	7	-	13322805	13322805	16724991	1	645,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	13406379	13431329	chr9:13406379-13431329	3	-	13406379	13406379	789624	3	2054,147,127,	0,10019,24823,
#Partially deleted in new
chr9	13416398	13433053	chr9:13416398-13433053	0	-	13416398	13416398	8553170	3	147,95,153,	0,16001,16502,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	13446490	13487511	chr9:13446490-13487511	3	+	13446490	13446490	8553170	2	103,409,	0,40612,
#Partially deleted in new
chr9	13927970	13945610	chr9:13927970-13945610	3	+	13927970	13927970	5263520	3	91,77,219,	0,16404,17421,
#Deleted in new
chr9	13986174	13987909	chr9:13986174-13987909	7	+	13986174	13986174	16724991	1	1735,	0,
#Partially deleted in new
chr9	14025970	14030115	chr9:14025970-14030115	3	+	14025970	14025970	8553170	3	107,166,163,	0,973,3982,
#Deleted in new
chr9	14040715	14041861	chr9:14040715-14041861	7	-	14040715	14040715	16724991	1	1146,	0,
#Deleted in new
chr9	14068931	14069417	chr9:14068931-14069417	7	+	14068931	14068931	16724991	1	486,	0,
#Partially deleted in new
chr9	14081842	14180802	chr9:14081842-14180802	1	-	14088196	14150194	789624	11	6484,89,83,139,185,135,119,121,69,54,144,	0,20579,31156,34365,38597,43789,64846,68302,73982,97884,98816,
#Partially deleted in new
chr9	14081847	14313985	chr9:14081847-14313985	3	-	14088308	14313511	789624	9	6479,185,135,119,121,69,54,532,504,	0,38592,43784,64841,68297,73977,97879,225141,231634,
#Partially deleted in new
chr9	14087568	14313667	chr9:14087568-14313667	1	-	14088308	14313511	789624	11	758,83,139,185,135,119,121,69,54,532,186,	0,25430,28639,32871,38063,59120,62576,68256,92158,219420,225913,
#Partially deleted in new
chr9	14087571	14314069	chr9:14087571-14314069	1	-	14088196	14313511	789624	12	755,89,83,139,185,135,119,121,69,54,532,588,	0,14850,25427,28636,32868,38060,59117,62573,68253,92155,219417,225910,
#Partially deleted in new
chr9	14087599	14314519	chr9:14087599-14314519	1	-	14088196	14313511	789624	12	727,89,83,166,185,135,119,121,69,54,532,1038,	0,14822,25399,28581,32840,38032,59089,62545,68225,92127,219389,225882,
#Partially deleted in new
chr9	14087602	14314582	chr9:14087602-14314582	1	-	14088196	14313511	789624	10	724,89,185,135,119,121,69,54,532,1101,	0,14819,32837,38029,59086,62542,68222,92124,219386,225879,
#Partially deleted in new
chr9	14087628	14322338	chr9:14087628-14322338	1	-	14088308	14321958	789624	9	698,185,135,119,121,69,54,532,398,	0,32811,38003,59060,62516,68196,92098,219360,234312,
#Partially deleted in new
chr9	14087628	14321948	chr9:14087628-14321948	0	-	14088196	14321948	789624	10	698,89,185,135,119,121,69,54,532,8,	0,14793,32811,38003,59060,62516,68196,92098,219360,234312,
#Partially deleted in new
chr9	14087628	14308073	chr9:14087628-14308073	0	-	14088308	14307922	789624	9	698,185,135,119,121,69,54,532,154,	0,32811,38003,59060,62516,68196,92098,219360,220291,
#Partially deleted in new
chr9	14087628	14322060	chr9:14087628-14322060	1	-	14088196	14321958	789624	12	698,89,83,166,185,135,119,121,69,54,532,120,	0,14793,25370,28552,32811,38003,59060,62516,68196,92098,219360,234312,
#Partially deleted in new
chr9	14087630	14307928	chr9:14087630-14307928	0	-	14088196	14307922	789624	10	696,89,185,135,119,121,69,54,532,9,	0,14791,32809,38001,59058,62514,68194,92096,219358,220289,
#Partially deleted in new
chr9	14087636	14313648	chr9:14087636-14313648	1	-	14093460	14313511	789624	11	690,5,89,185,135,119,121,69,54,532,167,	0,5823,14785,32803,37995,59052,62508,68188,92090,219352,225845,
#Partially deleted in new
chr9	14087673	14322001	chr9:14087673-14322001	1	-	14088308	14321958	789624	11	653,83,166,185,135,119,121,69,54,307,61,	0,25325,28507,32766,37958,59015,62471,68151,92053,219540,234267,
#Partially deleted in new
chr9	14087673	14300231	chr9:14087673-14300231	1	-	14088196	14300210	789624	9	653,89,185,135,119,121,69,54,46,	0,14748,32766,37958,59015,62471,68151,92053,212512,
#Partially deleted in new
chr9	14087859	14398983	chr9:14087859-14398983	1	-	14088308	14398631	789624	9	467,185,135,119,121,69,54,532,460,	0,32580,37772,58829,62285,67965,91867,219129,310664,
#Partially deleted in new
chr9	14087881	14096613	chr9:14087881-14096613	0	-	14087881	14087881	8553170	2	445,263,	0,8469,
#Partially deleted in new
chr9	14088303	14180792	chr9:14088303-14180792	1	-	14088308	14150194	789624	8	23,185,135,119,121,69,54,134,	0,32136,37328,58385,61841,67521,91423,92355,
#Deleted in new
chr9	14094217	14096650	chr9:14094217-14096650	0	-	14094217	14094217	8553170	2	245,300,	0,2133,
#Partially deleted in new
chr9	14150179	14313843	chr9:14150179-14313843	0	-	14150179	14313511	789624	5	86,69,54,307,362,	0,5645,29547,157034,163302,
#Deleted in new
chr9	14204247	14205039	chr9:14204247-14205039	7	+	14204247	14204247	16724991	1	792,	0,
#Deleted in new
chr9	14305752	14313957	chr9:14305752-14313957	1	-	14305977	14313511	789624	3	266,532,476,	0,1236,7729,
#Deleted in new
chr9	14305759	14313963	chr9:14305759-14313963	1	-	14306014	14313511	789624	3	261,531,482,	0,1230,7722,
#Deleted in new
chr9	14307035	14308013	chr9:14307035-14308013	0	-	14307035	14307922	789624	2	485,106,	0,872,
#Partially deleted in new
chr9	14317084	14357854	chr9:14317084-14357854	3	+	14317084	14317084	8553170	2	261,703,	0,40067,
#Partially deleted in new
chr9	14347319	14357908	chr9:14347319-14357908	0	+	14347319	14347319	8553170	2	36,757,	0,9832,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	14361293	14398711	chr9:14361293-14398711	0	-	14361293	14361293	8553170	2	1595,188,	0,37230,
#Deleted in new
chr9	14531915	14532042	chr9:14531915-14532042	7	-	14531915	14531915	16724991	1	127,	0,
#Partially deleted in new
chr9	14586765	14587326	chr9:14586765-14587326	3	-	14586765	14586765	8553170	1	561,	0,
#Partially deleted in new
chr9	14588796	14590065	chr9:14588796-14590065	3	-	14588796	14588796	8553170	1	1269,	0,
#Partially deleted in new
chr9	14593576	14594200	chr9:14593576-14594200	7	+	14593576	14593576	16724991	1	624,	0,
#Partially deleted in new
chr9	14611070	14693471	chr9:14611070-14693471	3	-	14618965	14674340	789624	10	8028,44,117,139,112,99,199,130,49,243,	0,8568,28825,47678,51144,61759,63116,68962,79266,82158,
#Deleted in new
chr9	14719723	14722717	chr9:14719723-14722717	3	-	14720089	14722672	789624	2	663,552,	0,2442,
#Partially deleted in new
chr9	14734665	14910995	chr9:14734665-14910995	3	-	14737395	14868977	789624	38	2930,86,116,129,165,48,239,150,73,130,145,202,415,265,196,142,145,223,197,186,195,253,94,209,168,91,197,143,345,132,109,324,197,302,95,501,323,226,	0,5483,11687,12257,12598,13015,13735,15461,21708,25106,35058,35939,41123,49704,54253,58077,62832,66986,70290,71995,73274,78146,82112,84568,88494,89359,90130,106781,107650,111294,113999,116618,122887,124517,129143,134078,175248,176104,
#Partially deleted in new
chr9	14737151	14779533	chr9:14737151-14779533	1	-	14737395	14776253	789624	14	444,86,116,129,165,48,239,150,73,130,145,202,468,86,	0,2997,9201,9771,10112,10529,11249,12975,19222,22620,32572,33453,38637,42296,
#Partially deleted in new
chr9	14737199	14910995	chr9:14737199-14910995	0	-	14750249	14868977	789624	31	396,86,116,129,165,48,239,150,142,145,223,197,186,195,253,94,209,168,91,197,143,345,132,109,324,197,302,95,501,323,226,	0,2949,9153,9723,10064,10481,11201,12927,55543,60298,64452,67756,69461,70740,75612,79578,82034,85960,86825,87596,104247,105116,108760,111465,114084,120353,121983,126609,131544,172714,173570,
#Partially deleted in new
chr9	14737365	14774161	chr9:14737365-14774161	0	-	14747705	14774160	789624	11	230,86,116,129,165,48,73,130,145,202,97,	0,2783,8987,9557,9898,10315,19008,22406,32358,33239,36699,
#Partially deleted in new
chr9	14737395	14910430	chr9:14737395-14910430	1	-	14737395	14868977	789624	37	200,86,116,129,165,48,239,150,73,130,145,202,415,265,196,142,145,223,197,186,195,253,94,209,168,91,197,143,345,132,109,324,197,302,95,501,517,	0,2753,8957,9527,9868,10285,11005,12731,18978,22376,32328,33209,38393,46974,51523,55347,60102,64256,67560,69265,70544,75416,79382,81838,85764,86629,87400,104051,104920,108564,111269,113888,120157,121787,126413,131348,172518,
#Partially deleted in new
chr9	14751704	14775905	chr9:14751704-14775905	0	-	14751704	14751704	8553170	6	148,73,130,145,202,117,	0,4669,8067,18019,18900,24084,
#Partially deleted in new
chr9	14775822	14784634	chr9:14775822-14784634	0	-	14775822	14775822	8553170	2	434,265,	0,8547,
#Partially deleted in new
chr9	14775934	14792801	chr9:14775934-14792801	0	-	14775934	14775934	8553170	4	269,265,148,59,	0,8435,12984,16808,
#Partially deleted in new
chr9	14784271	14792884	chr9:14784271-14792884	0	-	14784271	14784271	8553170	3	363,196,142,	0,4647,8471,
#Deleted in new
chr9	14790634	14791158	chr9:14790634-14791158	3	+	14790634	14790634	8553170	1	524,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	14850428	14850535	chr9:14850428-14850535	3	+	14850428	14850428	8553170	1	107,	0,
#Deleted in new
chr9	14921336	14922334	chr9:14921336-14922334	7	-	14921336	14921336	16724991	1	998,	0,
#Partially deleted in new
chr9	14993311	15019729	chr9:14993311-15019729	7	+	14993311	14993311	16724991	8	86,160,186,99,151,88,173,245,	0,3852,7044,8322,14420,18364,24043,26173,
#Partially deleted in new
chr9	15034160	15048061	chr9:15034160-15048061	5	-	15034160	15034160	16724991	4	561,187,106,163,	0,1628,6551,13738,
#Partially deleted in new
chr9	15055056	15056052	chr9:15055056-15056052	7	+	15055056	15055056	16724991	1	996,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	15143288	15143386	chr9:15143288-15143386	3	+	15143288	15143288	8553170	1	98,	0,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr9	15163621	15307360	chr9:15163621-15307360	3	-	15172018	15307323	789624	20	8488,117,118,109,127,92,162,60,68,109,66,106,65,68,77,132,111,96,35,277,	0,11397,14075,18685,21658,23322,24349,25952,26103,26932,27568,28968,36239,40201,46466,47644,50517,62295,104292,143462,
#Partially deleted in new
chr9	15170844	15307360	chr9:15170844-15307360	1	-	15172018	15307323	789624	18	1265,117,118,109,127,92,162,60,68,109,66,106,65,68,77,132,35,277,	0,4174,6852,11462,14435,16099,17126,18729,18880,19709,20345,21745,29016,32978,39243,40421,97069,136239,
#Partially deleted in new
chr9	15170844	15307360	chr9:15170844-15307360	1	-	15172018	15307323	789624	19	1265,117,118,109,127,92,162,89,109,66,106,65,68,77,132,111,96,35,277,	0,4174,6852,11462,14435,16099,17126,18859,19709,20345,21745,29016,32978,39243,40421,43294,55072,97069,136239,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	15171563	15188065	chr9:15171563-15188065	0	-	15171563	15171563	8553170	7	546,117,118,109,249,92,95,	0,3455,6133,10743,13716,15380,16407,
#Partially deleted in new
chr9	15171928	15232444	chr9:15171928-15232444	1	-	15172018	15211384	789624	20	181,117,118,109,127,92,162,60,68,109,66,106,65,68,77,132,111,166,96,213,	0,3090,5768,10378,13351,15015,16042,17645,17796,18625,19261,20661,27932,31894,38159,39337,42210,52411,53988,60303,
#Partially deleted in new
chr9	15171945	15250116	chr9:15171945-15250116	1	-	15172018	15211384	789624	18	164,117,118,109,127,92,162,60,68,109,66,106,65,68,77,132,111,199,	0,3073,5751,10361,13334,14998,16025,17628,17779,18608,19244,20644,27915,31877,38142,39320,42193,77972,
#Partially deleted in new
chr9	15186586	15307360	chr9:15186586-15307360	0	-	15186586	15186586	8553170	15	449,162,60,68,109,66,106,65,68,77,132,111,96,35,277,	0,1384,2987,3138,3967,4603,6003,13274,17236,23501,24679,27552,39330,81327,120497,
#Partially deleted in new
chr9	15214137	15232444	chr9:15214137-15232444	0	-	15214137	15214137	8553170	4	112,146,96,213,	0,10222,11779,18094,
#Partially deleted in new
chr9	15249041	15307209	chr9:15249041-15307209	0	-	15249961	15307209	789624	4	646,93,35,126,	0,876,18872,58042,
#Partially deleted in new
chr9	15361392	15362134	chr9:15361392-15362134	7	+	15361392	15361392	16724991	1	742,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	15422703	15464134	chr9:15422703-15464134	1	+	15422879	15459866	789624	9	490,78,85,105,150,83,165,108,4416,	0,1205,10848,21898,24391,28616,30337,35256,37015,
#Partially deleted in new
chr9	15422733	15465953	chr9:15422733-15465953	0	+	15422879	15459866	789624	12	460,78,85,105,150,83,165,108,595,175,126,444,	0,1175,10818,21868,24361,28586,30307,35226,36985,38897,40131,42776,
#Partially deleted in new
chr9	15422733	15465832	chr9:15422733-15465832	3	+	15422879	15459866	789624	12	460,78,85,105,150,83,165,108,595,175,126,323,	0,1175,10818,21868,24361,28586,30307,35226,36985,38897,40131,42776,
#Partially deleted in new
chr9	15422868	15462460	chr9:15422868-15462460	0	+	15422879	15459866	789624	10	325,78,85,105,150,83,165,108,595,830,	0,1040,10683,21733,24226,28451,30172,35091,36850,38762,
#Partially deleted in new
chr9	15422878	15453104	chr9:15422878-15453104	0	+	15422879	15453104	789624	6	315,78,85,105,83,64,	0,1030,10673,21723,28441,30162,
#Partially deleted in new
chr9	15423141	15433824	chr9:15423141-15433824	0	+	15423141	15423141	8553170	3	52,78,273,	0,767,10410,
#Partially deleted in new
chr9	15431898	15432006	chr9:15431898-15432006	3	-	15431898	15431898	8553170	1	108,	0,
#Partially deleted in new
chr9	15447111	15453577	chr9:15447111-15453577	1	+	15447121	15453209	789624	3	133,83,537,	0,4208,5929,
#Partially deleted in new
chr9	15464065	15511019	chr9:15464065-15511019	3	-	15465519	15510188	0	16	1515,112,214,102,71,56,119,229,76,97,63,105,139,77,213,203,	0,2682,4564,4891,5200,5872,8566,9943,14411,15525,21940,22761,25920,42495,46051,46751,
#Partially deleted in new
chr9	15464065	15510995	chr9:15464065-15510995	1	-	15465519	15510188	0	16	1515,112,214,102,71,56,119,229,76,97,63,105,139,77,210,179,	0,2682,4564,4891,5200,5872,8566,9943,14411,15525,21940,22761,25920,42495,46051,46751,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	15470635	15510991	chr9:15470635-15510991	1	-	15471298	15510188	0	11	676,119,229,76,97,63,105,139,77,210,175,	0,1996,3373,7841,8955,15370,16191,19350,35925,39481,40181,
#Partially deleted in new
chr9	15470635	15510994	chr9:15470635-15510994	1	-	15471206	15510188	0	11	596,119,229,76,97,63,105,139,77,210,178,	0,1996,3373,7841,8955,15370,16191,19350,35925,39481,40181,
#Partially deleted in new
chr9	15470645	15510289	chr9:15470645-15510289	1	-	15471206	15510188	0	10	586,119,229,76,97,63,105,139,77,173,	0,1986,3363,7831,8945,15360,16181,19340,35915,39471,
#Partially deleted in new
chr9	15470989	15472750	chr9:15470989-15472750	0	-	15471097	15472750	789624	2	187,119,	0,1642,
#Partially deleted in new
chr9	15472080	15474201	chr9:15472080-15474201	0	-	15472080	15472080	8553170	2	670,193,	0,1928,
#Partially deleted in new
chr9	15485902	15510289	chr9:15485902-15510289	0	-	15485902	15485902	8553170	5	166,105,139,77,173,	0,924,4083,20658,24214,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	15489269	15510946	chr9:15489269-15510946	0	-	15489269	15489269	8553170	5	171,139,77,213,130,	0,716,17291,20847,21547,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	15491951	15510991	chr9:15491951-15510991	0	-	15491951	15491951	8553170	4	274,77,210,175,	0,14609,18165,18865,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	15504958	15510989	chr9:15504958-15510989	0	-	15504958	15504958	8553170	3	1679,213,173,	0,5158,5858,
#Partially deleted in new
chr9	15524575	15524707	chr9:15524575-15524707	7	-	15524575	15524575	16724991	1	132,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	15525781	15526081	chr9:15525781-15526081	3	-	15525781	15525781	8553170	1	300,	0,
#Deleted in new
chr9	15527132	15527683	chr9:15527132-15527683	7	-	15527132	15527132	16724991	1	551,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	15544187	15544294	chr9:15544187-15544294	3	+	15544187	15544187	8553170	1	107,	0,
#Partially deleted in new
chr9	15553085	15974039	chr9:15553085-15974039	3	+	15564088	15971836	789624	26	217,152,136,175,191,132,147,93,161,139,103,107,66,201,168,189,505,117,227,183,186,146,55,132,153,2431,	0,10892,18538,25763,38280,40955,70181,104041,113077,125672,142149,168683,170595,171690,174783,176524,191187,192429,224514,225882,231423,293616,295807,321446,367184,418523,
#Partially deleted in new
chr9	15553290	15564024	chr9:15553290-15564024	0	+	15553290	15553290	8553170	2	316,47,	0,10687,
#Partially deleted in new
chr9	15588354	15588615	chr9:15588354-15588615	7	+	15588354	15588354	16724991	1	261,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	15744504	15886805	chr9:15744504-15886805	0	+	15744504	15883163	789624	11	273,117,227,183,186,146,55,132,118,75,1116,	0,1010,33095,34463,40004,102197,104388,130027,138569,141009,141185,
#Partially deleted in new
chr9	15777767	15876083	chr9:15777767-15876083	0	+	15777767	15874675	789624	6	59,183,186,146,55,1552,	0,1200,6741,68934,71125,96764,
#Partially deleted in new
chr9	15845638	15971897	chr9:15845638-15971897	0	+	15845638	15845638	8553170	6	63,146,55,132,153,289,	0,1063,3254,28893,74631,125970,
#Partially deleted in new
chr9	15850225	15971735	chr9:15850225-15971735	0	+	15850225	15850225	8553170	4	86,132,153,127,	0,24306,70044,121383,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	15874540	16061663	chr9:15874540-16061663	0	+	15874540	15874540	8553170	10	123,153,92,206,254,170,69,114,123,1018,	0,45729,47570,146048,147791,148198,160916,161552,168257,186105,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	15887794	15920334	chr9:15887794-15920334	0	+	15887794	15887794	8553170	3	294,119,65,	0,1188,32475,
#Partially deleted in new
chr9	16042797	16061320	chr9:16042797-16061320	0	+	16042797	16042797	8553170	2	89,675,	0,17848,
#Partially deleted in new
chr9	16203934	16276313	chr9:16203934-16276313	0	-	16203934	16203934	789624	4	104,64,128,83,	0,11281,11837,72296,
#Partially deleted in new
chr9	16203937	16253107	chr9:16203937-16253107	3	-	16203965	16253101	789624	4	101,64,128,68,	0,11278,11834,49102,
#Partially deleted in new
chr9	16203946	16253114	chr9:16203946-16253114	0	-	16203946	16203946	8553170	4	92,64,128,75,	0,11269,11825,49093,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	16203947	16410990	chr9:16203947-16410990	0	-	16203947	16203947	8553170	4	91,128,128,45,	0,11824,196472,206998,
#Partially deleted in new
chr9	16409502	16870706	chr9:16409502-16870706	3	-	16418988	16870648	789624	7	10147,1970,236,103,201,126,61,	0,26052,143027,173480,318294,328857,461143,
#Partially deleted in new
chr9	16418293	16870760	chr9:16418293-16870760	0	-	16429926	16870648	789624	9	1356,34,700,1970,236,103,201,126,115,	0,2968,11006,17261,134236,164689,309503,320066,452352,
#Partially deleted in new
chr9	16418542	16436372	chr9:16418542-16436372	0	-	16421276	16436372	789624	5	1107,34,85,62,818,	0,2719,12860,16495,17012,
#Partially deleted in new
chr9	16418542	16727997	chr9:16418542-16727997	0	-	16419632	16727997	789624	6	1101,62,1970,236,103,201,	0,16495,17012,133987,164440,309254,
#Partially deleted in new
chr9	16418567	16870747	chr9:16418567-16870747	1	-	16419632	16552676	789624	7	1076,62,1970,236,103,201,102,	0,16470,16987,133962,164415,309229,452078,
#Partially deleted in new
chr9	16418809	16870731	chr9:16418809-16870731	1	-	16418988	16870648	789624	6	840,1970,236,103,126,86,	0,16745,133720,164173,319550,451836,
#Partially deleted in new
chr9	16437075	16868170	chr9:16437075-16868170	0	-	16437075	16727892	789624	5	449,236,103,201,222,	0,115454,145907,290721,430873,
#Partially deleted in new
chr9	16437224	16728165	chr9:16437224-16728165	0	-	16437224	16727892	789624	4	300,236,103,369,	0,115305,145758,290572,
#Partially deleted in new
chr9	16473187	16476237	chr9:16473187-16476237	3	+	16473187	16473187	8553170	2	169,245,	0,2805,
#Partially deleted in new
chr9	16552579	16870843	chr9:16552579-16870843	0	-	16552579	16870648	789624	4	186,103,201,198,	0,30403,175217,318066,
#Partially deleted in new
chr9	16552599	16728214	chr9:16552599-16728214	0	-	16552599	16727892	789624	4	166,103,201,75,	0,30383,175197,175540,
#Partially deleted in new
chr9	16579790	16727997	chr9:16579790-16727997	0	-	16580122	16727997	789624	3	358,103,201,	0,3192,148006,
#Partially deleted in new
chr9	16579836	16705082	chr9:16579836-16705082	1	-	16580122	16704755	789624	3	312,103,330,	0,3146,124916,
#Partially deleted in new
chr9	16583059	16867692	chr9:16583059-16867692	0	-	16583059	16727892	789624	3	26,201,334,	0,144737,284299,
#Partially deleted in new
chr9	16583059	16867692	chr9:16583059-16867692	0	-	16583059	16727892	789624	4	26,201,126,334,	0,144737,155300,284299,
#Deleted in new
chr9	16625675	16626390	chr9:16625675-16626390	3	+	16625675	16625675	8553170	2	222,233,	0,482,
#Deleted in new
chr9	16726813	16727524	chr9:16726813-16727524	3	+	16726813	16726813	789624	3	142,76,210,	0,217,501,
#Deleted in new
chr9	16775572	16775845	chr9:16775572-16775845	7	-	16775572	16775572	16724991	1	273,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	16917510	17049041	chr9:16917510-17049041	3	+	16917510	16917510	8553170	8	88,67,95,76,86,221,957,123,	0,757,918,5016,41399,63973,65455,131408,
#Deleted in new
chr9	16982722	16983459	chr9:16982722-16983459	3	-	16982722	16982722	8553170	2	145,74,	0,663,
#Partially deleted in new
chr9	17018519	17112815	chr9:17018519-17112815	0	+	17018519	17018519	8553170	3	270,123,543,	0,30399,93753,
#Partially deleted in new
chr9	17052821	17114122	chr9:17052821-17114122	1	+	17052821	17052821	8553170	4	179,55,68,1850,	0,38238,39681,59451,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	17053900	17054204	chr9:17053900-17054204	3	+	17053900	17053900	8553170	1	304,	0,
#Deleted in new
chr9	17096300	17096446	chr9:17096300-17096446	7	-	17096300	17096300	16724991	1	146,	0,
#Partially deleted in new
chr9	17108303	17108604	chr9:17108303-17108604	7	-	17108303	17108303	16724991	1	301,	0,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr9	17134981	17503923	chr9:17134981-17503923	3	+	17135065	17502652	789624	26	444,89,85,135,180,134,163,195,177,126,122,120,101,92,536,181,94,224,192,98,127,138,186,186,78,1373,	0,8306,91221,100676,101427,138751,163208,174076,195650,197623,205845,207343,231635,253180,259552,274311,280806,280984,322542,327934,329515,330999,331724,349313,352007,367569,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	17134981	17168556	chr9:17134981-17168556	0	+	17134981	17134981	8553170	3	444,89,1739,	0,8306,31836,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	17135039	17302051	chr9:17135039-17302051	1	+	17135065	17298382	789624	7	386,89,85,135,180,134,3862,	0,8248,91163,100618,101369,138693,163150,
#Partially deleted in new
chr9	17415817	17462984	chr9:17415817-17462984	0	+	17415817	17415817	8553170	5	64,224,50,105,69,	0,148,28379,41706,47098,
#Deleted in new
chr9	17447144	17448543	chr9:17447144-17448543	7	-	17447144	17447144	16724991	1	1399,	0,
#Partially deleted in new
chr9	17579081	17630429	chr9:17579081-17630429	0	+	17579081	17579081	8553170	2	206,76,	0,51272,
#Partially deleted in new
chr9	17579122	17797129	chr9:17579122-17797129	3	+	17579242	17795743	0	9	165,69,73,144,134,159,104,131,1586,	0,167943,182314,207258,208257,210269,212108,214244,216421,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	17589160	17591318	chr9:17589160-17591318	7	-	17589160	17589160	16724991	2	1593,414,	0,1744,
#Partially deleted in new
chr9	17906562	18533292	chr9:17906562-18533292	0	+	17906835	18533292	789624	4	360,120,128,46,	0,257299,598266,626684,
#Deleted in new
chr9	18360596	18362220	chr9:18360596-18362220	3	-	18360596	18360596	8553170	2	99,138,	0,1486,
#Partially deleted in new
chr9	18473893	18910950	chr9:18473893-18910950	3	+	18474232	18908548	789624	29	402,128,46,237,127,75,158,112,139,51,205,148,85,302,130,211,180,154,1126,128,129,180,135,213,181,208,110,221,2509,	0,30935,59353,100136,148349,162049,165360,183745,188041,201963,206418,207918,210822,232853,247642,279404,296708,301849,302887,321503,343215,352390,355949,413937,415674,418495,431888,432798,434548,
#Partially deleted in new
chr9	18474099	18684957	chr9:18474099-18684957	1	+	18474232	18684804	789624	13	196,128,46,237,127,75,158,112,139,51,205,148,242,	0,30729,59147,99930,148143,161843,165154,183539,187835,201757,206212,207712,210616,
#Partially deleted in new
chr9	18474143	18574527	chr9:18474143-18574527	1	+	18474232	18574350	789624	4	152,128,46,498,	0,30685,59103,99886,
#Partially deleted in new
chr9	18474152	18622619	chr9:18474152-18622619	1	+	18474232	18622428	789624	5	143,128,46,237,377,	0,30676,59094,99877,148090,
#Partially deleted in new
chr9	18474168	18681483	chr9:18474168-18681483	1	+	18474232	18680546	789624	10	127,128,46,237,127,75,158,112,139,1172,	0,30660,59078,99861,148074,161774,165085,183470,187766,206143,
#Partially deleted in new
chr9	18474232	18723917	chr9:18474232-18723917	1	+	18474232	18723063	789624	16	63,128,46,237,127,75,158,112,139,51,205,148,85,302,130,900,	0,30596,59014,99797,148010,161710,165021,183406,187702,201624,206079,207579,210483,232514,247303,248785,
#Partially deleted in new
chr9	18573305	18573379	chr9:18573305-18573379	3	+	18573305	18573305	5263520	1	74,	0,
#Deleted in new
chr9	18651146	18651450	chr9:18651146-18651450	3	+	18651146	18651146	8553170	1	304,	0,
#Partially deleted in new
chr9	18657614	18684957	chr9:18657614-18684957	0	+	18657614	18657614	8553170	5	136,139,205,148,242,	0,4320,22697,24197,27101,
#Partially deleted in new
chr9	18706640	18910947	chr9:18706640-18910947	0	+	18706640	18706640	8553170	16	408,130,211,180,154,1126,128,129,180,135,213,181,208,110,221,2506,	0,14895,46657,63961,69102,70140,88756,110468,119643,123202,181190,182927,185748,199141,200051,201801,
#Deleted in new
chr9	18717973	18718526	chr9:18717973-18718526	7	-	18717973	18717973	16724991	1	553,	0,
#Partially deleted in new
chr9	18793224	18796762	chr9:18793224-18796762	0	+	18793224	18793224	8553170	3	35,128,239,	0,2172,3299,
#Partially deleted in new
chr9	18826137	18908609	chr9:18826137-18908609	1	+	18826246	18908548	789624	8	326,135,213,181,208,110,221,168,	0,3705,61693,63430,66251,79644,80554,82304,
#Partially deleted in new
chr9	18826137	18910294	chr9:18826137-18910294	0	+	18826246	18905812	789624	7	326,135,213,181,110,221,1853,	0,3705,61693,63430,79644,80554,82304,
#Partially deleted in new
chr9	18826147	18908609	chr9:18826147-18908609	0	+	18826246	18906844	789624	6	316,135,213,110,221,168,	0,3695,61683,79634,80544,82294,
#Partially deleted in new
chr9	18829922	18890790	chr9:18829922-18890790	0	+	18829922	18890557	789624	4	55,213,181,237,	0,57908,59645,60631,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	18858905	19049358	chr9:18858905-19049358	1	-	18928051	18950780	8553170	12	4273,86,188,257,151,128,83,202,2742,203,180,150,	0,27387,34289,34604,38583,42107,66144,66856,67408,82731,91852,190303,
#Deleted in new
chr9	18905490	18910947	chr9:18905490-18910947	0	+	18905490	18905490	8553170	2	401,4256,	0,1201,
#Partially deleted in new
chr9	18927657	19033188	chr9:18927657-19033188	3	-	18928051	19032908	789624	4	1398,203,180,318,	0,13979,23100,105213,
#Partially deleted in new
chr9	18927661	19049354	chr9:18927661-19049354	1	-	18928051	18950780	789624	4	1394,203,180,146,	0,13975,23096,121547,
#Partially deleted in new
chr9	18927891	19033253	chr9:18927891-19033253	1	-	18929051	19032908	789624	3	1164,180,383,	0,22866,104979,
#Partially deleted in new
chr9	18947691	19033209	chr9:18947691-19033209	0	-	18947691	18947691	8553170	3	55,180,339,	0,3066,85179,
#Partially deleted in new
chr9	19026891	19028129	chr9:19026891-19028129	7	+	19026891	19026891	16724991	1	1238,	0,
#Deleted in new
chr9	19049394	19050983	chr9:19049394-19050983	3	+	19049659	19050601	0	1	1589,	0,
#Partially deleted in new
chr9	19053142	19103119	chr9:19053142-19103119	3	-	19056342	19102651	789624	17	3262,1041,136,186,67,82,103,127,194,171,49,66,148,133,79,96,596,	0,4818,6945,9865,10371,17076,23459,25033,27336,29730,33591,33948,36269,40028,41174,43531,49381,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	19056617	19093213	chr9:19056617-19093213	1	-	19057949	19093198	789624	13	2384,136,186,67,82,103,127,194,171,49,66,148,43,	0,3470,6390,6896,13601,19984,21558,23861,26255,30116,30473,32794,36553,
#Partially deleted in new
chr9	19058763	19065084	chr9:19058763-19065084	0	-	19058763	19063184	789624	5	238,136,186,67,53,	0,1324,4244,4750,6268,
#Deleted in new
chr9	19063655	19063786	chr9:19063655-19063786	3	-	19063655	19063655	789624	1	131,	0,
#Deleted in new
chr9	19073842	19073946	chr9:19073842-19073946	3	+	19073842	19073842	8553170	1	104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	19089592	19089688	chr9:19089592-19089688	3	+	19089592	19089592	8553170	1	96,	0,
#Partially deleted in new
chr9	19108374	19118446	chr9:19108374-19118446	0	-	19108374	19108374	8553170	3	373,291,126,	0,7984,9946,
#Partially deleted in new
chr9	19115769	19127576	chr9:19115769-19127576	3	-	19116247	19126426	789624	8	880,135,182,286,83,196,52,158,	0,2551,3880,5110,7795,10344,10627,11649,
#Partially deleted in new
chr9	19121099	19149278	chr9:19121099-19149278	0	-	19121099	19126426	789624	6	66,83,196,52,57,169,	0,2465,5014,5297,10115,28010,
#Partially deleted in new
chr9	19123234	19127476	chr9:19123234-19127476	1	-	19123404	19126426	789624	5	242,83,196,52,58,	0,330,2879,3162,4184,
#Partially deleted in new
chr9	19123312	19127490	chr9:19123312-19127490	1	-	19123540	19126426	789624	4	335,196,52,72,	0,2801,3084,4106,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	19125505	19127475	chr9:19125505-19127475	0	-	19125505	19125505	8553170	2	943,57,	0,1913,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	19125632	19127490	chr9:19125632-19127490	0	-	19125632	19125632	8553170	3	677,52,72,	0,764,1786,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	19129736	19149290	chr9:19129736-19149290	0	-	19129736	19129736	8553170	2	1535,181,	0,19373,
#Deleted in new
chr9	19200334	19201046	chr9:19200334-19201046	7	-	19200334	19200334	16724991	1	712,	0,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chr9	19230434	19372598	chr9:19230434-19372598	1	+	19276174	19372173	789624	33	399,322,253,70,173,239,67,59,145,176,101,219,146,36,131,133,207,129,145,147,123,147,1166,178,110,176,183,196,246,118,151,65,562,	0,45723,56334,58161,60269,65573,67621,68794,69752,74917,85982,86186,93927,95504,95629,97595,101543,104542,105835,106251,110557,112198,115486,120267,121638,122055,126537,127530,129809,131411,139402,141321,141602,
#Boundary problem: need 32, got 0, diff 32, mapped 0.0
chr9	19230434	19372858	chr9:19230434-19372858	3	+	19276174	19372173	789624	32	399,322,253,70,173,239,67,59,145,176,101,219,146,36,131,133,207,129,145,123,147,1166,178,110,176,183,196,246,118,151,65,822,	0,45723,56334,58161,60269,65573,67621,68794,69752,74917,85982,86186,93927,95504,95629,97595,101543,104542,105835,110557,112198,115486,120267,121638,122055,126537,127530,129809,131411,139402,141321,141602,
#Partially deleted in new
chr9	19230796	19276671	chr9:19230796-19276671	0	+	19230796	19230796	8553170	2	37,514,	0,45361,
#Boundary problem: need 29, got 0, diff 29, mapped 0.0
chr9	19290757	19372594	chr9:19290757-19372594	0	+	19290757	19290757	8553170	29	119,239,67,59,145,176,101,219,146,36,131,133,211,129,563,72,123,147,1166,178,110,176,183,196,246,118,151,65,558,	0,5250,7298,8471,9429,14594,25659,25863,33604,35181,35306,37272,41220,44219,45512,46843,50234,51875,55163,59944,61315,61732,66214,67207,69486,71088,79079,80998,81279,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr9	19290757	19372594	chr9:19290757-19372594	0	+	19290757	19325949	789624	28	119,239,67,59,145,176,101,219,36,131,133,129,145,147,72,123,147,1166,178,110,176,183,196,246,118,151,65,558,	0,5250,7298,8471,9429,14594,25659,25863,35181,35306,37272,44219,45512,45928,46843,50234,51875,55163,59944,61315,61732,66214,67207,69486,71088,79079,80998,81279,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	19291336	19292576	chr9:19291336-19292576	3	-	19291336	19291336	8553170	2	107,302,	0,938,
#Partially deleted in new
chr9	19336403	19341044	chr9:19336403-19341044	0	+	19336403	19336403	8553170	2	429,53,	0,4588,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	19342668	19372880	chr9:19342668-19372880	0	+	19342668	19372046	789624	11	111,1166,178,110,176,183,196,246,118,151,844,	0,3252,8033,9404,9821,14303,15296,17575,19177,27168,29368,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	19346555	19373545	chr9:19346555-19373545	0	+	19346555	19372173	789624	11	531,178,110,176,183,196,246,118,151,65,1509,	0,4146,5517,5934,10416,11409,13688,15290,23281,25200,25481,
#Partially deleted in new
chr9	19346727	19357695	chr9:19346727-19357695	0	+	19346727	19357209	789624	5	359,178,110,176,724,	0,3974,5345,5762,10244,
#Partially deleted in new
chr9	19371385	19371945	chr9:19371385-19371945	3	-	19371385	19371385	8553170	1	560,	0,
#Partially deleted in new
chr9	19375450	19375996	chr9:19375450-19375996	3	+	19375450	19375450	8553170	1	546,	0,
#Partially deleted in new
chr9	19375714	19380254	chr9:19375714-19380254	3	-	19376292	19380195	0	6	674,158,147,211,132,65,	0,779,2653,2993,3772,4475,
#Partially deleted in new
chr9	19376254	19376839	chr9:19376254-19376839	0	-	19376254	19376254	8553170	2	134,346,	0,239,
#Partially deleted in new
chr9	19376269	19380206	chr9:19376269-19380206	1	-	19376292	19379531	789624	5	119,158,147,211,720,	0,224,2098,2438,3217,
#Partially deleted in new
chr9	19376284	19380198	chr9:19376284-19380198	1	-	19376292	19379531	789624	6	104,158,147,211,132,111,	0,209,2083,2423,3202,3803,
#Partially deleted in new
chr9	19378773	19380236	chr9:19378773-19380236	1	-	19379348	19380195	789624	2	845,47,	0,1416,
#Partially deleted in new
chr9	19383216	19383887	chr9:19383216-19383887	7	-	19383216	19383216	16724991	2	133,212,	0,459,
#Partially deleted in new
chr9	19386926	19408532	chr9:19386926-19408532	3	-	19386926	19386926	8553170	2	692,111,	0,21495,
#Partially deleted in new
chr9	19409058	19452020	chr9:19409058-19452020	3	+	19409084	19450636	789624	6	134,115,142,138,138,1571,	0,14803,15641,25888,37222,41391,
#Deleted in new
chr9	19453208	19455173	chr9:19453208-19455173	3	+	19453208	19453208	8553170	1	1965,	0,
#Deleted in new
chr9	19460925	19461304	chr9:19460925-19461304	5	-	19460925	19460925	16724991	1	379,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	19507451	19786928	chr9:19507451-19786928	3	-	19516152	19786866	789624	10	8951,167,90,132,119,99,51,109,39,992,	0,13442,20597,42685,65899,69472,89777,112132,114809,278485,
#Partially deleted in new
chr9	19515979	19786928	chr9:19515979-19786928	1	-	19516152	19786866	789624	9	423,167,90,132,119,99,109,39,992,	0,4914,12069,34157,57371,60944,103604,106281,269957,
#Deleted in new
chr9	19705337	19705655	chr9:19705337-19705655	7	+	19705337	19705337	16724991	1	318,	0,
#Deleted in new
chr9	19895799	19895973	chr9:19895799-19895973	7	-	19895799	19895799	16724991	1	174,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	19926093	19929937	chr9:19926093-19929937	3	+	19926093	19926093	8553170	1	3844,	0,
#Partially deleted in new
chr9	19957393	19958147	chr9:19957393-19958147	7	-	19957393	19957393	16724991	1	754,	0,
#Deleted in new
chr9	19967238	19967994	chr9:19967238-19967994	7	-	19967238	19967238	16724991	1	756,	0,
#Deleted in new
chr9	20331445	20332277	chr9:20331445-20332277	7	+	20331445	20331445	16724991	1	832,	0,
#Partially deleted in new
chr9	20341664	20622543	chr9:20341664-20622543	3	-	20346442	20622256	0	11	4910,72,72,100,130,76,705,144,83,181,299,	0,11860,13143,19077,21811,24004,72056,106458,115039,278989,280580,
#Partially deleted in new
chr9	20345075	20622518	chr9:20345075-20622518	1	-	20346442	20363588	789624	10	1499,72,100,130,76,705,144,83,181,274,	0,9732,15666,18400,20593,68645,103047,111628,275578,277169,
#Partially deleted in new
chr9	20345076	20382487	chr9:20345076-20382487	0	-	20345076	20345076	8553170	6	1498,72,100,130,76,107,	0,9731,15665,18399,20592,37304,
#Partially deleted in new
chr9	20346198	20621873	chr9:20346198-20621873	1	-	20346442	20621775	0	11	376,72,72,100,130,76,705,144,83,181,101,	0,7326,8609,14543,17277,19470,67522,101924,110505,274455,275574,
#Partially deleted in new
chr9	20346292	20363569	chr9:20346292-20363569	0	-	20346292	20346292	8553170	3	282,100,94,	0,14449,17183,
#Partially deleted in new
chr9	20346352	20382471	chr9:20346352-20382471	0	-	20346352	20346352	8553170	4	222,72,72,91,	0,7172,8455,36028,
#Partially deleted in new
chr9	20346405	20382469	chr9:20346405-20382469	1	-	20346442	20363588	789624	7	169,72,72,100,130,76,89,	0,7119,8402,14336,17070,19263,35975,
#Partially deleted in new
chr9	20360741	20411962	chr9:20360741-20411962	0	-	20360741	20360741	8553170	5	100,130,76,110,147,	0,2734,4927,49819,51074,
#Partially deleted in new
chr9	20360752	20382452	chr9:20360752-20382452	0	-	20360752	20360752	8553170	5	89,130,76,121,72,	0,2723,4916,19454,21628,
#Partially deleted in new
chr9	20362704	20622440	chr9:20362704-20622440	0	-	20362704	20362704	8553170	5	901,76,705,181,196,	0,2964,51016,257949,259540,
#Deleted in new
chr9	20411147	20411238	chr9:20411147-20411238	3	-	20411147	20411147	5263520	1	91,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	20418320	20418427	chr9:20418320-20418427	3	+	20418320	20418320	8553170	1	107,	0,
#Deleted in new
chr9	20502264	20502342	chr9:20502264-20502342	3	-	20502264	20502264	5263520	1	78,	0,
#Deleted in new
chr9	20532551	20533339	chr9:20532551-20533339	7	+	20532551	20532551	16724991	1	788,	0,
#Deleted in new
chr9	20683303	20684688	chr9:20683303-20684688	3	-	20683303	20683303	789624	2	238,121,	0,1264,
#Deleted in new
chr9	20683388	20683938	chr9:20683388-20683938	0	-	20683388	20683388	8553170	2	153,64,	0,486,
#Partially deleted in new
chr9	20683977	20720421	chr9:20683977-20720421	0	+	20683977	20683977	8553170	4	316,89,75,42,	0,31344,33816,36402,
#Partially deleted in new
chr9	20715320	20995955	chr9:20715320-20995955	1	+	20715353	20995629	789624	43	90,75,155,105,102,205,207,88,203,258,105,102,131,127,135,51,84,127,186,122,93,89,45,109,117,239,90,148,120,123,78,72,103,81,129,116,261,90,178,98,252,76,400,	0,2473,5059,24915,42769,49548,54711,63360,66406,74030,104475,105003,105620,107668,147257,150605,151608,159360,166550,169788,191829,197545,201572,208339,210980,214037,217693,229306,231380,232950,233530,234283,235675,237664,261099,263018,266105,267036,270967,273011,274802,277932,280235,
#Deleted in new
chr9	20716104	20716188	chr9:20716104-20716188	3	+	20716104	20716104	5263520	1	84,	0,
#Partially deleted in new
chr9	20726285	20770112	chr9:20726285-20770112	0	+	20726285	20726285	8553170	5	63,105,102,205,81,	0,13950,31804,38583,43746,
#Partially deleted in new
chr9	20726350	20770133	chr9:20726350-20770133	0	+	20726350	20726350	8553170	5	82,105,102,200,102,	0,13885,31739,38523,43681,
#Deleted in new
chr9	20786926	20787055	chr9:20786926-20787055	3	+	20786926	20786926	5263520	1	129,	0,
#Partially deleted in new
chr9	20789333	20823049	chr9:20789333-20823049	0	+	20789333	20789333	8553170	4	275,102,131,61,	0,30990,31607,33655,
#Partially deleted in new
chr9	20820293	20995948	chr9:20820293-20995948	1	+	20820970	20995629	789624	32	132,131,127,135,51,84,127,186,122,93,89,45,109,117,239,90,148,120,123,78,72,103,81,129,116,261,90,178,98,252,76,393,	0,647,2695,42284,45632,46635,54387,61577,64815,86856,92572,96599,103366,106007,109064,112720,124333,126407,127977,128557,129310,130702,132691,156126,158045,161132,162063,165994,168038,169829,172959,175262,
#Partially deleted in new
chr9	20820388	20865967	chr9:20820388-20865967	0	+	20820970	20823038	789624	6	37,121,127,135,130,42,	0,552,2600,42189,43032,45537,
#Partially deleted in new
chr9	20822992	20863147	chr9:20822992-20863147	0	+	20822992	20822992	8553170	2	123,570,	0,39585,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	20872806	20907202	chr9:20872806-20907202	0	+	20872806	20872806	8553170	5	66,127,186,122,53,	0,1874,9064,12302,34343,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	20873842	20875815	chr9:20873842-20875815	0	+	20873842	20873842	8553170	1	1973,	0,
#Partially deleted in new
chr9	20881905	20885529	chr9:20881905-20885529	0	+	20881905	20881905	8553170	2	151,383,	0,3241,
#Partially deleted in new
chr9	20896970	20912908	chr9:20896970-20912908	0	+	20896970	20896970	8553170	3	78,93,43,	0,10179,15895,
#Partially deleted in new
chr9	20927764	20946731	chr9:20927764-20946731	0	+	20929480	20946731	789624	5	127,239,90,148,31,	0,1593,5249,16862,18936,
#Partially deleted in new
chr9	20927801	20948394	chr9:20927801-20948394	0	+	20927832	20948394	789624	5	90,90,148,120,124,	0,5212,16825,18899,20469,
#Partially deleted in new
chr9	20928943	20944717	chr9:20928943-20944717	0	+	20929480	20944717	789624	4	139,239,90,91,	0,414,4070,15683,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	20952419	20981461	chr9:20952419-20981461	0	+	20952419	20952419	8553170	6	96,81,116,227,116,36,	0,565,5082,23902,25919,29006,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	20999514	21031636	chr9:20999514-21031636	3	-	21007036	21031590	789624	7	7605,126,107,113,128,104,84,	0,8506,12074,16383,27081,29780,32038,
#Partially deleted in new
chr9	21015136	21026745	chr9:21015136-21026745	0	-	21015136	21015136	8553170	3	874,102,150,	0,2672,11459,
#Deleted in new
chr9	21058770	21059323	chr9:21058770-21059323	7	-	21058770	21058770	16724991	1	553,	0,
#Deleted in new
chr9	21077104	21077963	chr9:21077104-21077963	3	-	21077305	21077869	0	1	859,	0,
#Deleted in new
chr9	21106542	21106836	chr9:21106542-21106836	7	+	21106542	21106542	16724991	1	294,	0,
#Deleted in new
chr9	21135597	21136350	chr9:21135597-21136350	7	-	21135597	21135597	16724991	2	154,440,	0,313,
#Deleted in new
chr9	21140213	21142145	chr9:21140213-21142145	3	-	21140982	21141570	0	1	1932,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	21160234	21160336	chr9:21160234-21160336	3	-	21160234	21160234	8553170	1	102,	0,
#Deleted in new
chr9	21165636	21166660	chr9:21165636-21166660	3	-	21166042	21166612	789624	1	1024,	0,
#Deleted in new
chr9	21178588	21179188	chr9:21178588-21179188	7	-	21178588	21178588	16724991	1	600,	0,
#Deleted in new
chr9	21186693	21187671	chr9:21186693-21187671	3	-	21186961	21187531	789624	1	978,	0,
#Deleted in new
chr9	21190653	21191244	chr9:21190653-21191244	7	-	21190653	21190653	16724991	1	591,	0,
#Deleted in new
chr9	21201468	21202205	chr9:21201468-21202205	3	-	21201595	21202165	789624	1	737,	0,
#Partially deleted in new
chr9	21206180	21207143	chr9:21206180-21207143	3	-	21206527	21207097	789624	1	963,	0,
#Partially deleted in new
chr9	21209188	21209779	chr9:21209188-21209779	7	-	21209188	21209188	16724991	1	591,	0,
#Partially deleted in new
chr9	21216372	21217311	chr9:21216372-21217311	3	-	21216735	21217305	789624	1	939,	0,
#Partially deleted in new
chr9	21227242	21228222	chr9:21227242-21228222	3	-	21227603	21228173	789624	1	980,	0,
#Partially deleted in new
chr9	21231265	21231853	chr9:21231265-21231853	7	-	21231265	21231265	16724991	1	588,	0,
#Deleted in new
chr9	21239001	21239991	chr9:21239001-21239991	3	-	21239365	21239935	789624	1	990,	0,
#Deleted in new
chr9	21278049	21278619	chr9:21278049-21278619	7	-	21278049	21278049	16724991	1	570,	0,
#Deleted in new
chr9	21304325	21305312	chr9:21304325-21305312	3	-	21304686	21305256	789624	1	987,	0,
#Deleted in new
chr9	21321299	21321827	chr9:21321299-21321827	7	+	21321299	21321299	16724991	1	528,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	21329670	21335380	chr9:21329670-21335380	3	-	21333005	21334859	789624	1	5710,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	21349834	21351378	chr9:21349834-21351378	3	-	21350317	21350887	789624	1	1544,	0,
#Deleted in new
chr9	21350252	21350956	chr9:21350252-21350956	1	-	21350317	21350890	789624	1	704,	0,
#Partially deleted in new
chr9	21367423	21368057	chr9:21367423-21368057	1	-	21367437	21368007	0	1	634,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	21367423	21368962	chr9:21367423-21368962	3	-	21367437	21368010	789624	1	1539,	0,
#Deleted in new
chr9	21384253	21385388	chr9:21384253-21385388	3	-	21384762	21385329	789624	1	1135,	0,
#Partially deleted in new
chr9	21394887	21396346	chr9:21394887-21396346	3	-	21394887	21394887	8553170	1	1459,	0,
#Partially deleted in new
chr9	21398613	21399139	chr9:21398613-21399139	7	-	21398613	21398613	16724991	1	526,	0,
#Partially deleted in new
chr9	21403080	21403651	chr9:21403080-21403651	7	+	21403080	21403080	16724991	1	571,	0,
#Partially deleted in new
chr9	21409146	21410185	chr9:21409146-21410185	3	+	21409176	21409746	789624	1	1039,	0,
#Deleted in new
chr9	21420233	21420813	chr9:21420233-21420813	7	+	21420233	21420233	16724991	1	580,	0,
#Deleted in new
chr9	21440453	21441316	chr9:21440453-21441316	3	+	21440507	21441077	0	1	863,	0,
#Deleted in new
chr9	21455483	21456049	chr9:21455483-21456049	7	+	21455483	21455483	16724991	1	566,	0,
#Partially deleted in new
chr9	21455641	21559669	chr9:21455641-21559669	3	-	21455641	21455641	789624	4	303,137,124,181,	0,21257,21527,103847,
#Deleted in new
chr9	21480838	21482313	chr9:21480838-21482313	3	-	21481067	21481694	789624	1	1475,	0,
#Deleted in new
chr9	21512114	21512185	chr9:21512114-21512185	3	-	21512114	21512114	5263520	1	71,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	21524306	21524382	chr9:21524306-21524382	3	-	21524306	21524306	8553170	1	76,	0,
#Deleted in new
chr9	21638284	21638676	chr9:21638284-21638676	7	+	21638284	21638284	16724991	1	392,	0,
#Deleted in new
chr9	21695175	21696943	chr9:21695175-21696943	7	+	21695175	21695175	16724991	1	1768,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	21699313	21699596	chr9:21699313-21699596	3	+	21699313	21699313	8553170	1	283,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	21802542	21867078	chr9:21802542-21867078	3	+	21802748	21862014	0	8	239,87,59,168,103,240,123,5103,	0,12890,14171,15492,35365,52088,56760,59433,
#Partially deleted in new
chr9	21802635	22032986	chr9:21802635-22032986	3	+	21802748	22029517	789624	6	146,87,59,168,162,313,	0,12797,14078,15399,226797,230038,
#Partially deleted in new
chr9	21802641	21862320	chr9:21802641-21862320	1	+	21802866	21862014	789624	8	309,87,59,168,103,240,123,345,	0,12791,14072,15393,35266,51989,56661,59334,
#Partially deleted in new
chr9	21802646	21815607	chr9:21802646-21815607	0	+	21802646	21802646	8553170	2	135,175,	0,12786,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	21802648	21937651	chr9:21802648-21937651	1	+	21802748	21931199	0	8	133,87,59,168,103,240,123,6644,	0,12784,14065,15386,35259,51982,56654,128359,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	21802648	21865971	chr9:21802648-21865971	1	+	21802748	21862014	0	8	133,87,59,168,103,240,123,3996,	0,12784,14065,15386,35259,51982,56654,59327,
#Partially deleted in new
chr9	21802656	21863286	chr9:21802656-21863286	0	+	21802748	21816721	789624	8	125,112,59,168,103,240,123,1311,	0,12776,14057,15378,35251,51974,56646,59319,
#Partially deleted in new
chr9	21802661	21862367	chr9:21802661-21862367	0	+	21802748	21859324	789624	8	120,87,59,168,103,240,140,392,	0,12771,14052,15373,35246,51969,56624,59314,
#Partially deleted in new
chr9	21802960	21818045	chr9:21802960-21818045	0	+	21802960	21802960	8553170	4	421,87,59,11,	0,12472,13753,15074,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	21803277	21837927	chr9:21803277-21837927	0	+	21818056	21837927	789624	7	104,194,121,87,59,168,20,	0,5529,10488,12155,13436,14757,34630,
#Deleted in new
chr9	21811620	21812347	chr9:21811620-21812347	7	-	21811620	21811620	16724991	1	727,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	21854723	21931199	chr9:21854723-21931199	0	+	21854723	21931199	789624	2	147,192,	0,76284,
#Partially deleted in new
chr9	21856117	21862357	chr9:21856117-21862357	0	+	21856117	21856117	8553170	3	106,123,382,	0,3185,5858,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	21858909	21861926	chr9:21858909-21861926	3	-	21858909	21858909	8553170	1	3017,	0,
#Partially deleted in new
chr9	21859219	21862092	chr9:21859219-21862092	0	+	21859219	21859219	8553170	2	206,117,	0,2756,
#Partially deleted in new
chr9	21859322	21862220	chr9:21859322-21862220	0	+	21859322	21859322	8553170	3	103,51,245,	0,2444,2653,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	21929456	21931073	chr9:21929456-21931073	7	+	21929456	21929456	16724991	1	1617,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	21930389	21932739	chr9:21930389-21932739	0	+	21930389	21930389	8553170	1	2350,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	21966928	21967751	chr9:21966928-21967751	3	+	21966928	21966928	8553170	1	823,	0,
#Partially deleted in new
chr9	21967752	21975098	chr9:21967752-21975098	1	-	21968228	21974827	0	3	490,307,421,	0,3149,6925,
#Partially deleted in new
chr9	21967752	21994624	chr9:21967752-21994624	3	-	21971002	21994331	789624	3	490,307,486,	0,3149,26386,
#Partially deleted in new
chr9	21967990	21974858	chr9:21967990-21974858	1	-	21968208	21974827	789624	3	252,233,181,	0,2985,6687,
#Partially deleted in new
chr9	21967995	21971332	chr9:21967995-21971332	1	-	21968228	21971205	0	2	247,431,	0,2906,
#Partially deleted in new
chr9	21968000	21994411	chr9:21968000-21994411	1	-	21971002	21994331	789624	3	242,233,273,	0,2975,26138,
#Partially deleted in new
chr9	21968055	21974866	chr9:21968055-21974866	1	-	21968724	21974827	0	4	187,197,307,189,	0,519,2846,6622,
#Partially deleted in new
chr9	21968104	21995301	chr9:21968104-21995301	1	-	21968228	21971205	0	3	138,307,481,	0,2797,26716,
#Partially deleted in new
chr9	21968179	21974827	chr9:21968179-21974827	0	-	21974476	21974827	789624	3	63,307,424,	0,2722,6224,
#Partially deleted in new
chr9	21968181	21995269	chr9:21968181-21995269	1	-	21968228	21971205	0	4	61,307,172,449,	0,2720,25700,26639,
#Deleted in new
chr9	21969568	21971346	chr9:21969568-21971346	1	-	21969731	21971205	789624	3	225,307,12,	0,1333,1766,
#Deleted in new
chr9	21969582	21970467	chr9:21969582-21970467	0	-	21969582	21969582	8553170	2	211,231,	0,654,
#Deleted in new
chr9	21970441	21971332	chr9:21970441-21971332	0	-	21970441	21970441	8553170	2	62,431,	0,460,
#Deleted in new
chr9	21970715	21971400	chr9:21970715-21971400	1	-	21970890	21971205	789624	2	493,72,	0,613,
#Partially deleted in new
chr9	21989339	21994873	chr9:21989339-21994873	0	-	21989339	21989339	8553170	3	616,187,53,	0,4542,5481,
#Partially deleted in new
chr9	21994777	22032956	chr9:21994777-22032956	1	+	21994777	21994777	8553170	4	72,114,162,283,	0,270,34655,37896,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr9	21994790	22121095	chr9:21994790-22121095	1	+	21994790	21994790	789624	19	371,162,313,133,150,123,136,696,74,75,96,119,143,107,76,134,124,211,592,	0,34642,37883,51526,51960,54315,61461,63568,67162,69153,70871,71444,101581,102467,117529,118875,123853,125409,125713,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	21994790	22077890	chr9:21994790-22077890	0	+	21994790	21994790	789624	8	371,150,123,136,74,75,119,212,	0,51960,54315,61461,67162,69153,71444,82888,
#Partially deleted in new
chr9	21994790	22077890	chr9:21994790-22077890	0	+	21994790	21994790	789624	4	371,150,123,212,	0,51960,54315,82888,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	21994790	22077890	chr9:21994790-22077890	0	+	21994790	21994790	789624	13	371,162,313,133,150,123,136,696,74,75,96,119,212,	0,34642,37883,51526,51960,54315,61461,63568,67162,69153,70871,71444,82888,
#Partially deleted in new
chr9	21994790	22120544	chr9:21994790-22120544	1	+	21994790	21994790	789624	9	371,150,123,107,76,134,124,211,41,	0,51960,54315,102467,117529,118875,123853,125409,125713,
#Partially deleted in new
chr9	21994822	22031043	chr9:21994822-22031043	1	+	21994822	21994822	8553170	2	339,1611,	0,34610,
#Partially deleted in new
chr9	21994901	22120572	chr9:21994901-22120572	0	+	21994901	21994901	789624	7	260,150,123,76,124,211,69,	0,51849,54204,117418,123742,125298,125602,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	21994901	22120572	chr9:21994901-22120572	0	+	21994901	21994901	789624	8	260,150,123,136,76,124,211,69,	0,51849,54204,61350,117418,123742,125298,125602,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	21994901	22120572	chr9:21994901-22120572	0	+	21994901	21994901	789624	9	260,150,123,136,76,134,124,211,69,	0,51849,54204,61350,117418,118764,123742,125298,125602,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	21994901	22077890	chr9:21994901-22077890	0	+	21994901	21994901	789624	6	260,150,123,136,75,212,	0,51849,54204,61350,69042,82777,
#Partially deleted in new
chr9	21994901	22120572	chr9:21994901-22120572	0	+	21994901	21994901	789624	5	260,150,123,211,69,	0,51849,54204,125298,125602,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	21994901	22120572	chr9:21994901-22120572	0	+	21994901	21994901	789624	6	260,150,123,136,211,69,	0,51849,54204,61350,125298,125602,
#Partially deleted in new
chr9	21994901	22120572	chr9:21994901-22120572	0	+	21994901	21994901	789624	4	260,150,123,69,	0,51849,54204,125602,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	21995094	22077891	chr9:21995094-22077891	0	+	21995094	21995094	789624	5	67,150,123,136,213,	0,51656,54011,61157,82584,
#Deleted in new
chr9	21995481	21996013	chr9:21995481-21996013	3	+	21995481	21995481	8553170	2	24,411,	0,121,
#Partially deleted in new
chr9	22002902	22009363	chr9:22002902-22009363	3	-	22005986	22008953	789624	2	3345,566,	0,5895,
#Deleted in new
chr9	22005202	22006271	chr9:22005202-22006271	0	-	22005202	22005202	8553170	1	1069,	0,
#Partially deleted in new
chr9	22005986	22009272	chr9:22005986-22009272	1	-	22008716	22008953	789624	2	261,598,	0,2688,
#Deleted in new
chr9	22012154	22012536	chr9:22012154-22012536	7	+	22012154	22012154	16724991	1	382,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	22046750	22118702	chr9:22046750-22118702	0	+	22046750	22046750	8553170	6	150,123,136,76,134,59,	0,2355,9501,65569,66915,71893,
#Deleted in new
chr9	22046757	22046901	chr9:22046757-22046901	3	+	22046757	22046757	8553170	1	144,	0,
#Deleted in new
chr9	22112070	22120713	chr9:22112070-22120713	0	+	22112070	22112070	8553170	6	62,76,134,124,211,210,	0,249,1595,6573,8129,8433,
#Deleted in new
chr9	22113677	22121097	chr9:22113677-22121097	2	+	22113677	22113677	8553170	3	122,211,594,	0,6522,6826,
#Deleted in new
chr9	22117587	22120713	chr9:22117587-22120713	0	+	22117587	22117587	8553170	3	1180,211,210,	0,2612,2916,
#Deleted in new
chr9	22117664	22117814	chr9:22117664-22117814	3	+	22117664	22117664	8553170	1	150,	0,
#Deleted in new
chr9	22118967	22120713	chr9:22118967-22120713	1	+	22118967	22118967	8553170	2	1443,210,	0,1536,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	22203989	22214672	chr9:22203989-22214672	3	-	22203989	22203989	8553170	4	70,72,93,208,	0,9288,9687,10475,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	22446840	22455740	chr9:22446840-22455740	3	+	22447065	22451911	789624	2	892,4677,	0,4223,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	22682469	22687627	chr9:22682469-22687627	0	+	22682469	22682469	8553170	2	244,81,	0,5077,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	22703515	23438700	chr9:22703515-23438700	3	-	22703515	22703515	8553170	10	226,143,81,63,115,68,122,118,111,139,	0,37862,44712,49238,61646,118502,170682,302564,560711,735046,
#Deleted in new
chr9	22747699	22748234	chr9:22747699-22748234	7	+	22747699	22747699	16724991	1	535,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	22767174	22768316	chr9:22767174-22768316	3	+	22767174	22767174	8553170	2	92,355,	0,787,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr9	23500690	23672387	chr9:23500690-23672387	3	-	23500690	23500690	789624	28	704,153,173,93,112,187,68,179,55,156,88,65,146,114,164,391,123,100,320,116,209,138,68,259,192,244,89,99,	0,8914,10905,12409,12629,13938,21324,21982,22736,23967,24937,37672,39888,40846,50051,51849,53804,101994,104091,147653,147998,148508,150306,158728,162135,165574,171038,171598,
#Deleted in new
chr9	23632105	23632360	chr9:23632105-23632360	7	+	23632105	23632105	16724991	1	255,	0,
#Deleted in new
chr9	23671787	23672399	chr9:23671787-23672399	3	-	23671787	23671787	8553170	2	126,111,	0,501,
#Deleted in new
chr9	23681893	23682662	chr9:23681893-23682662	7	+	23681893	23681893	16724991	1	769,	0,
#Partially deleted in new
chr9	23690103	23821480	chr9:23690103-23821480	1	-	23692556	23762234	789624	6	2781,226,154,104,244,254,	0,11275,14814,40918,71902,131123,
#Partially deleted in new
chr9	23690103	23821275	chr9:23690103-23821275	1	-	23692556	23765080	789624	8	2784,39,226,154,104,244,91,49,	0,3344,11275,14814,40918,71902,74905,131123,
#Partially deleted in new
chr9	23690106	23826065	chr9:23690106-23826065	3	-	23692556	23762234	789624	7	2778,39,226,154,104,244,260,	0,3341,11272,14811,40915,71899,135699,
#Partially deleted in new
chr9	23690106	23821848	chr9:23690106-23821848	1	-	23692556	23762234	789624	7	2778,39,226,154,104,244,244,	0,3341,11272,14811,40915,71899,131498,
#Partially deleted in new
chr9	23691810	23826337	chr9:23691810-23826337	1	-	23692556	23762234	789624	7	1074,39,226,154,104,241,532,	0,1637,9568,13107,39211,70195,133995,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	23701414	23735565	chr9:23701414-23735565	0	-	23701414	23704999	789624	4	190,154,104,329,	0,3503,29607,33822,
#Partially deleted in new
chr9	23701522	23779375	chr9:23701522-23779375	0	-	23701522	23762234	789624	5	82,154,104,244,139,	0,3395,29499,60483,77714,
#Partially deleted in new
chr9	23765044	23826174	chr9:23765044-23826174	0	-	23765044	23765044	8553170	2	55,369,	0,60761,
#Partially deleted in new
chr9	23829669	23849914	chr9:23829669-23849914	3	+	23829669	23829669	8553170	5	605,161,132,133,399,	0,1768,2514,17606,19846,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	23894989	23898054	chr9:23894989-23898054	3	-	23894989	23894989	8553170	2	617,70,	0,2995,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	23955759	23956444	chr9:23955759-23956444	7	+	23955759	23955759	16724991	1	685,	0,
#Deleted in new
chr9	24542951	24545881	chr9:24542951-24545881	1	-	24543228	24545649	789624	7	416,91,81,18,90,75,458,	0,712,1249,1791,2020,2260,2472,
#Deleted in new
chr9	24543214	24545676	chr9:24543214-24545676	3	-	24543228	24545649	789624	6	153,91,81,90,75,253,	0,449,986,1757,1997,2209,
#Deleted in new
chr9	24543306	24545946	chr9:24543306-24545946	0	-	24543306	24545946	789624	5	61,91,81,90,58,	0,357,894,1665,2582,
#Partially deleted in new
chr9	24545937	24592104	chr9:24545937-24592104	3	+	24545937	24545937	8553170	5	192,74,95,181,226,	0,15419,15818,44333,45941,
#Partially deleted in new
chr9	24545951	24591993	chr9:24545951-24591993	1	+	24545951	24545951	8553170	5	178,167,95,181,115,	0,6011,15804,44319,45927,
#Partially deleted in new
chr9	24545997	24553239	chr9:24545997-24553239	0	+	24545997	24545997	8553170	3	132,167,319,	0,5965,6923,
#Deleted in new
chr9	24905468	24905735	chr9:24905468-24905735	3	+	24905468	24905468	8553170	1	267,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	25088810	25089151	chr9:25088810-25089151	3	-	25088810	25088810	8553170	1	341,	0,
#Deleted in new
chr9	25676388	25678440	chr9:25676388-25678440	3	-	25677682	25678321	789624	1	2052,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	25780055	25812968	chr9:25780055-25812968	3	+	25780055	25780055	789624	6	113,202,202,173,199,348,	0,360,4359,17978,18689,32565,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	25804186	25812967	chr9:25804186-25812967	0	+	25804186	25804186	8553170	3	73,143,347,	0,2409,8434,
#Deleted in new
chr9	25937911	25938434	chr9:25937911-25938434	7	+	25937911	25937911	16724991	1	523,	0,
#Deleted in new
chr9	26642696	26644595	chr9:26642696-26644595	3	-	26642696	26642696	8553170	1	1899,	0,
#Deleted in new
chr9	26796172	26796304	chr9:26796172-26796304	3	-	26796172	26796172	8553170	1	132,	0,
#Partially deleted in new
chr9	26801732	26805862	chr9:26801732-26805862	3	+	26801732	26801732	8553170	2	328,43,	0,4087,
#Partially deleted in new
chr9	26840684	26892804	chr9:26840684-26892804	3	-	26842300	26892715	789624	6	1963,74,76,85,201,392,	0,20381,44125,45419,46628,51728,
#Partially deleted in new
chr9	26840710	26892792	chr9:26840710-26892792	0	-	26869928	26892715	8553170	8	1937,74,147,52,76,85,201,380,	0,20355,25923,29215,44099,45393,46602,51702,
#Partially deleted in new
chr9	26841735	26892442	chr9:26841735-26892442	1	-	26842300	26887381	789624	6	912,74,76,85,201,184,	0,19330,43074,44368,45577,50523,
#Partially deleted in new
chr9	26842265	26892803	chr9:26842265-26892803	1	-	26842614	26892715	789624	2	382,391,	0,50147,
#Partially deleted in new
chr9	26842393	26892787	chr9:26842393-26892787	0	-	26892313	26892715	789624	6	254,74,93,85,201,529,	0,18672,42416,43710,44919,49865,
#Partially deleted in new
chr9	26861088	26892604	chr9:26861088-26892604	0	-	26861088	26861088	8553170	4	51,76,201,192,	0,23721,26224,31324,
#Partially deleted in new
chr9	26869925	26887478	chr9:26869925-26887478	0	-	26869925	26869925	8553170	4	52,76,85,166,	0,14884,16178,17387,
#Deleted in new
chr9	26880177	26880549	chr9:26880177-26880549	7	-	26880177	26880177	16724991	1	372,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	26895677	26895970	chr9:26895677-26895970	3	+	26895677	26895677	8553170	1	293,	0,
#Partially deleted in new
chr9	26904082	26947463	chr9:26904082-26947463	3	-	26905510	26947045	0	14	1994,165,102,69,69,220,158,170,136,168,121,101,194,567,	0,3751,6255,9796,13014,15227,16144,19095,21742,22310,24017,24225,30930,42814,
#Partially deleted in new
chr9	26905882	26923233	chr9:26905882-26923233	0	-	26905882	26923233	789624	7	194,102,69,69,220,158,56,	0,4455,7996,11214,13427,14344,17295,
#Partially deleted in new
chr9	26907609	26919374	chr9:26907609-26919374	0	-	26907825	26919374	789624	4	389,102,69,65,	0,2728,6269,11700,
#Partially deleted in new
chr9	26907802	26947233	chr9:26907802-26947233	1	-	26907825	26947045	789624	13	196,102,69,69,220,158,170,136,168,121,101,194,337,	0,2535,6076,9294,11507,12424,15375,18022,18590,20297,20505,27210,39094,
#Partially deleted in new
chr9	26916455	26919461	chr9:26916455-26919461	0	-	26916455	26916455	8553170	3	250,69,152,	0,641,2854,
#Deleted in new
chr9	26919192	26920346	chr9:26919192-26920346	0	-	26919192	26919192	8553170	2	337,120,	0,1034,
#Partially deleted in new
chr9	26925892	26946983	chr9:26925892-26946983	0	-	26925892	26946983	789624	6	68,168,121,101,185,87,	0,500,2207,2415,9120,21004,
#Partially deleted in new
chr9	26947038	27062925	chr9:26947038-27062925	3	+	26961967	27062736	789624	20	108,139,136,49,99,61,60,62,139,63,144,41,80,54,98,127,164,126,61,308,	0,14910,31089,33532,37218,37460,41630,43095,61981,64867,69868,71608,81986,97703,100235,101109,108570,109295,113552,115579,
#Partially deleted in new
chr9	26947038	26988728	chr9:26947038-26988728	0	+	26961967	26988728	789624	7	108,139,136,49,99,61,60,	0,14910,31089,33532,37218,37460,41630,
#Partially deleted in new
chr9	26947299	26984331	chr9:26947299-26984331	0	+	26961967	26984331	789624	5	164,139,136,49,75,	0,14649,30828,33271,36957,
#Partially deleted in new
chr9	26947311	27062925	chr9:26947311-27062925	1	+	26961967	27062736	789624	20	152,139,136,49,99,61,60,62,139,63,144,41,80,54,98,127,164,126,61,308,	0,14637,30816,33259,36945,37187,41357,42822,61708,64594,69595,71335,81713,97430,99962,100836,108297,109022,113279,115306,
#Deleted in new
chr9	26955779	26956295	chr9:26955779-26956295	3	-	26955779	26955779	789624	2	236,169,	0,347,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr9	26956349	27062884	chr9:26956349-27062884	0	+	26961967	26992638	8553170	21	167,139,136,49,99,61,60,62,295,139,63,144,41,80,54,98,127,164,126,61,267,	0,5599,21778,24221,27907,28149,32319,33784,36033,52670,55556,60557,62297,72675,88392,90924,91798,99259,99984,104241,106268,
#Partially deleted in new
chr9	26956372	27062930	chr9:26956372-27062930	1	+	26961967	27062736	789624	20	144,139,136,49,99,61,60,62,139,63,144,41,80,54,98,127,164,126,61,313,	0,5576,21755,24198,27884,28126,32296,33761,52647,55533,60534,62274,72652,88369,90901,91775,99236,99961,104218,106245,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	26956411	26984276	chr9:26956411-26984276	0	+	26961967	26984276	789624	6	105,139,136,49,114,20,	0,5537,21716,24159,25874,27845,
#Partially deleted in new
chr9	26956478	27036800	chr9:26956478-27036800	1	+	26961967	27036514	789624	14	38,139,136,49,99,61,60,62,139,63,144,41,80,351,	0,5470,21649,24092,27778,28020,32190,33655,52541,55427,60428,62168,72546,79971,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	26976566	26990164	chr9:26976566-26990164	0	+	26976776	26990164	789624	7	216,136,49,99,61,60,31,	0,1561,4004,7690,7932,12102,13567,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	26983831	26988697	chr9:26983831-26988697	0	+	26983831	26983831	8553170	3	524,61,29,	0,667,4837,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	26993135	27005693	chr9:26993135-27005693	3	-	26995520	26999694	789624	5	2714,189,514,90,102,	0,3175,4592,6478,12456,
#Partially deleted in new
chr9	26995540	26997769	chr9:26995540-26997769	0	-	26995540	26995540	8553170	3	309,55,42,	0,770,2187,
#Partially deleted in new
chr9	27028807	27048272	chr9:27028807-27048272	0	+	27028807	27028807	8553170	4	297,54,98,125,	0,15934,18466,19340,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	27102629	27104728	chr9:27102629-27104728	3	+	27102629	27102629	8553170	2	447,117,	0,1982,
#Partially deleted in new
chr9	27109140	27229687	chr9:27109140-27229687	1	+	27109590	27229232	0	21	502,111,153,132,141,152,145,162,135,285,300,152,211,111,191,114,71,41,97,100,530,	0,59354,60336,63475,64081,74318,76344,81388,83348,88174,93679,95770,97441,99980,103566,104343,108547,109636,110908,119065,120017,
#Partially deleted in new
chr9	27109148	27230175	chr9:27109148-27230175	3	+	27109590	27229232	0	23	494,312,111,153,132,141,129,152,145,162,135,285,300,155,211,111,191,114,71,41,97,100,1018,	0,48682,59346,60328,63467,64073,71091,74310,76336,81380,83340,88166,93671,95762,97433,99972,103558,104335,108539,109628,110900,119057,120009,
#Partially deleted in new
chr9	27109148	27230173	chr9:27109148-27230173	1	+	27109590	27192498	789624	23	494,312,111,153,132,141,152,145,162,37,135,285,300,155,211,111,191,114,71,41,97,100,1016,	0,48682,59346,60328,63467,64073,74310,76336,81380,82780,83340,88166,93671,95762,97433,99972,103558,104335,108539,109628,110900,119057,120009,
#Partially deleted in new
chr9	27109415	27229746	chr9:27109415-27229746	1	+	27109590	27229232	0	22	227,312,111,153,132,141,152,145,162,135,285,300,155,211,111,191,114,71,41,97,100,589,	0,48415,59079,60061,63200,63806,74043,76069,81113,83073,87899,93404,95495,97166,99705,103291,104068,108272,109361,110633,118790,119742,
#Partially deleted in new
chr9	27109452	27202885	chr9:27109452-27202885	0	+	27109590	27202885	789624	10	190,135,132,141,152,145,162,135,285,66,	0,60042,63163,63769,74006,76032,81076,83036,87862,93367,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	27198286	27198401	chr9:27198286-27198401	7	+	27198286	27198286	16724991	1	115,	0,
#Deleted in new
chr9	27210326	27210626	chr9:27210326-27210626	7	+	27210326	27210326	16724991	1	300,	0,
#Partially deleted in new
chr9	27245679	27278503	chr9:27245679-27278503	5	-	27245679	27245679	16724991	10	83,121,129,108,74,99,85,97,162,82,	0,1710,4366,12732,13015,16150,17859,22741,26247,32742,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr9	27245683	27282793	chr9:27245683-27282793	6	-	27245683	27245683	16724991	17	79,121,108,74,207,92,57,97,162,197,169,147,226,368,188,157,464,	0,1706,12728,13011,16146,17028,17525,22737,26243,28406,30098,31280,31867,32677,34744,35084,36646,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	27278306	27284869	chr9:27278306-27284869	5	-	27278306	27278306	16724991	4	422,154,128,670,	0,2461,4023,5893,
#Partially deleted in new
chr9	27284658	27297139	chr9:27284658-27297139	3	-	27284722	27297055	789624	8	314,154,60,45,87,87,126,160,	0,1550,5013,6360,7742,9657,11954,12321,
#Partially deleted in new
chr9	27284722	27297136	chr9:27284722-27297136	1	-	27284722	27297055	789624	7	250,154,60,45,87,126,157,	0,1486,4949,6296,9593,11890,12257,
#Partially deleted in new
chr9	27292132	27297136	chr9:27292132-27297136	1	-	27292392	27297055	789624	4	355,87,126,157,	0,2183,4480,4847,
#Partially deleted in new
chr9	27292412	27296740	chr9:27292412-27296740	0	-	27292412	27292412	8553170	3	75,180,128,	0,1903,4200,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	27325208	27529781	chr9:27325208-27529781	3	-	27330586	27455550	789624	4	5408,203,616,227,	0,33825,129924,204346,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	27359023	27421714	chr9:27359023-27421714	0	-	27359023	27359023	8553170	2	213,623,	0,62068,
#Partially deleted in new
chr9	27391733	27397563	chr9:27391733-27397563	3	+	27391733	27391733	8553170	4	25,161,89,433,	0,2367,5161,5397,
#Deleted in new
chr9	27524313	27526498	chr9:27524313-27526498	3	+	27524336	27524960	789624	2	648,492,	0,1693,
#Deleted in new
chr9	27529084	27530698	chr9:27529084-27530698	0	+	27529084	27529084	8553170	1	1614,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	27529918	27543902	chr9:27529918-27543902	3	+	27529918	27529918	8553170	2	410,8190,	0,5794,
#Partially deleted in new
chr9	27546544	27573866	chr9:27546544-27573866	3	-	27548235	27567120	789624	11	1878,110,58,236,117,73,65,96,60,488,158,	0,2012,4105,10016,11946,13682,15040,15836,18986,20132,27164,
#Partially deleted in new
chr9	27546545	27573450	chr9:27546545-27573450	1	-	27548235	27567120	789624	11	1877,110,58,236,117,73,65,96,60,488,20,	0,2011,4104,10015,11945,13681,15039,15835,18985,20131,26885,
#Partially deleted in new
chr9	27546554	27573448	chr9:27546554-27573448	0	-	27546554	27546554	8553170	10	1868,110,58,236,1809,65,96,60,488,18,	0,2002,4095,10006,11936,15030,15826,18976,20122,26876,
#Partially deleted in new
chr9	27547107	27573457	chr9:27547107-27573457	1	-	27548235	27567120	789624	12	1315,110,58,33,236,117,73,65,96,60,488,27,	0,1449,3542,7485,9453,11383,13119,14477,15273,18423,19569,26323,
#Partially deleted in new
chr9	27556455	27573819	chr9:27556455-27573819	1	-	27556529	27567120	789624	9	341,117,73,65,96,60,488,125,33,	0,2035,3771,5129,5925,9075,10221,14680,17331,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	27560500	27573866	chr9:27560500-27573866	1	-	27561580	27567120	789624	5	1149,96,60,488,80,	0,1880,5030,6176,13286,
#Partially deleted in new
chr9	27561548	27573755	chr9:27561548-27573755	1	-	27561580	27567120	789624	5	101,96,60,488,32,	0,832,3982,5128,12175,
#Partially deleted in new
chr9	27561589	27573866	chr9:27561589-27573866	0	-	27561589	27561589	8553170	5	60,96,60,488,158,	0,791,3941,5087,12119,
#Deleted in new
chr9	27608381	27610745	chr9:27608381-27610745	7	-	27608381	27608381	16724991	1	2364,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	27829275	27844481	chr9:27829275-27844481	3	+	27829275	27829275	8553170	2	213,1871,	0,13335,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	27937616	27944497	chr9:27937616-27944497	3	-	27937616	27937616	8553170	1	6881,	0,
#Partially deleted in new
chr9	27948077	28670285	chr9:27948077-28670285	3	-	27948850	27950671	789624	6	2629,51,159,33,86,86,	0,64277,347130,424758,527862,722122,
#Partially deleted in new
chr9	27948085	28670285	chr9:27948085-28670285	1	-	27948850	27950671	789624	6	2621,53,23,149,99,86,	0,64269,181565,347148,527841,722114,
#Partially deleted in new
chr9	27948085	28670286	chr9:27948085-28670286	1	-	27948850	27950671	789624	5	2628,18,149,99,87,	0,181570,347148,527841,722114,
#Partially deleted in new
chr9	28080604	28295331	chr9:28080604-28295331	0	-	28080604	28080604	8553170	2	374,124,	0,214603,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	28148210	28149236	chr9:28148210-28149236	7	+	28148210	28148210	16724991	1	1026,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	28598667	28599292	chr9:28598667-28599292	7	-	28598667	28598667	16724991	1	625,	0,
#Deleted in new
chr9	28863625	28863706	chr9:28863625-28863706	3	-	28863625	28863625	5263520	1	81,	0,
#Deleted in new
chr9	28888878	28888955	chr9:28888878-28888955	3	-	28888878	28888878	5263520	1	77,	0,
#Deleted in new
chr9	29254074	29254426	chr9:29254074-29254426	7	-	29254074	29254074	16724991	1	352,	0,
#Deleted in new
chr9	29317832	29318952	chr9:29317832-29318952	7	+	29317832	29317832	16724991	1	1120,	0,
#Deleted in new
chr9	29636485	29636853	chr9:29636485-29636853	7	+	29636485	29636485	16724991	1	368,	0,
#Deleted in new
chr9	29824741	29826711	chr9:29824741-29826711	7	-	29824741	29824741	16724991	1	1970,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	30388934	30575012	chr9:30388934-30575012	3	-	30388934	30388934	8553170	4	1166,54,116,630,	0,1369,57761,185448,
#Partially deleted in new
chr9	30558879	30559481	chr9:30558879-30559481	7	-	30558879	30558879	16724991	1	602,	0,
#Partially deleted in new
chr9	30670963	30671966	chr9:30670963-30671966	7	-	30670963	30670963	16724991	4	142,43,114,256,	0,422,492,747,
#Partially deleted in new
chr9	30689104	30690272	chr9:30689104-30690272	7	+	30689104	30689104	16724991	1	1168,	0,
#Partially deleted in new
chr9	30773463	30774732	chr9:30773463-30774732	7	+	30773463	30773463	16724991	1	1269,	0,
#Partially deleted in new
chr9	30799470	30800746	chr9:30799470-30800746	7	-	30799470	30799470	16724991	1	1276,	0,
#Partially deleted in new
chr9	30831877	30832225	chr9:30831877-30832225	7	-	30831877	30831877	16724991	1	348,	0,
#Partially deleted in new
chr9	30935484	30935977	chr9:30935484-30935977	7	+	30935484	30935484	16724991	1	493,	0,
#Deleted in new
chr9	30988084	30990572	chr9:30988084-30990572	7	+	30988084	30988084	16724991	2	345,1037,	0,1451,
#Deleted in new
chr9	31165617	31166980	chr9:31165617-31166980	7	-	31165617	31165617	16724991	1	1363,	0,
#Deleted in new
chr9	31253900	31254777	chr9:31253900-31254777	7	+	31253900	31253900	16724991	1	877,	0,
#Partially deleted in new
chr9	31371610	31381490	chr9:31371610-31381490	3	-	31371610	31371610	789624	2	589,132,	0,9748,
#Deleted in new
chr9	31505279	31505943	chr9:31505279-31505943	7	+	31505279	31505279	16724991	1	664,	0,
#Deleted in new
chr9	31505945	31506615	chr9:31505945-31506615	7	+	31505945	31505945	16724991	1	670,	0,
#Deleted in new
chr9	31644575	31645160	chr9:31644575-31645160	7	-	31644575	31644575	16724991	1	585,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	32293557	32293692	chr9:32293557-32293692	7	+	32293557	32293557	16724991	1	135,	0,
#Deleted in new
chr9	32333456	32334354	chr9:32333456-32334354	7	-	32333456	32333456	16724991	1	898,	0,
#Partially deleted in new
chr9	32384602	32450832	chr9:32384602-32450832	1	+	32405506	32450111	0	22	133,72,119,169,138,70,184,140,172,101,117,160,136,85,157,125,105,143,148,123,186,835,	0,1768,20882,22658,23911,33525,33725,34435,36253,38716,39946,41235,42698,44816,45815,47116,49125,49956,51647,55862,64293,65395,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr9	32384619	32454769	chr9:32384619-32454769	3	+	32405506	32450111	0	21	116,119,169,138,70,184,140,172,101,117,160,136,85,157,125,105,143,148,123,186,4772,	0,20865,22641,23894,33508,33708,34418,36236,38699,39929,41218,42681,44799,45798,47099,49108,49939,51630,55845,64276,65378,
#Partially deleted in new
chr9	32384619	32450836	chr9:32384619-32450836	1	+	32405506	32450111	0	22	116,68,119,169,138,70,184,140,172,101,117,160,136,85,157,125,105,143,148,123,186,839,	0,1751,20865,22641,23894,33508,33708,34418,36236,38699,39929,41218,42681,44799,45798,47099,49108,49939,51630,55845,64276,65378,
#Partially deleted in new
chr9	32455704	32526208	chr9:32455704-32526208	1	-	32457121	32491382	789624	17	1714,144,152,171,91,149,136,158,105,163,259,154,108,120,182,135,148,	0,3666,10585,12057,17270,21278,24514,25635,29470,31766,32240,33029,33639,35596,38056,45100,70356,
#Partially deleted in new
chr9	32455704	32526324	chr9:32455704-32526324	3	-	32457121	32526166	0	18	1714,144,152,171,91,149,136,158,105,163,259,154,108,120,148,182,135,264,	0,3666,10585,12057,17270,21278,24514,25635,29470,31766,32240,33029,33639,35596,36686,38056,45100,70356,
#Partially deleted in new
chr9	32540543	32552553	chr9:32540543-32552553	3	-	32541386	32552436	789624	3	3783,195,120,	0,10230,11890,
#Partially deleted in new
chr9	32540825	32552553	chr9:32540825-32552553	1	-	32541386	32552436	789624	2	3501,120,	0,11608,
#Deleted in new
chr9	32551143	32553007	chr9:32551143-32553007	1	+	32552434	32552923	789624	3	550,246,207,	0,1090,1657,
#Deleted in new
chr9	32551772	32552913	chr9:32551772-32552913	0	+	32552434	32552913	789624	3	35,246,113,	0,461,1028,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	32552328	32568621	chr9:32552328-32568621	1	+	32552434	32566453	789624	2	151,2231,	0,14062,
#Deleted in new
chr9	32552344	32553012	chr9:32552344-32553012	3	+	32552434	32552710	789624	1	668,	0,
#Partially deleted in new
chr9	32552347	32566929	chr9:32552347-32566929	0	+	32552434	32565465	789624	3	132,232,539,	0,13049,14043,
#Deleted in new
chr9	32552542	32553010	chr9:32552542-32553010	0	+	32552542	32552923	789624	2	108,210,	0,258,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	32552998	32573162	chr9:32552998-32573162	3	-	32553875	32573060	0	4	946,45,93,282,	0,5911,17961,19882,
#Partially deleted in new
chr9	32553532	32573184	chr9:32553532-32573184	1	-	32553875	32573060	789624	3	412,45,304,	0,5377,19348,
#Partially deleted in new
chr9	32553650	32573159	chr9:32553650-32573159	1	-	32553875	32573060	0	3	294,93,279,	0,17309,19230,
#Deleted in new
chr9	32566147	32567126	chr9:32566147-32567126	7	-	32566147	32566147	16724991	1	979,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	32629453	32635669	chr9:32629453-32635669	3	-	32630098	32635579	0	1	6216,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	32633453	32648685	chr9:32633453-32648685	3	+	32633453	32633453	8553170	2	1602,980,	0,14252,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	32643102	32645026	chr9:32643102-32645026	3	-	32643102	32643102	8553170	2	641,198,	0,1726,
#Deleted in new
chr9	32676062	32676520	chr9:32676062-32676520	7	-	32676062	32676062	16724991	1	458,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	32727068	32727522	chr9:32727068-32727522	7	-	32727068	32727068	16724991	1	454,	0,
#Deleted in new
chr9	32783498	32787399	chr9:32783498-32787399	3	+	32784183	32784891	789624	2	307,3274,	0,627,
#Partially deleted in new
chr9	32836574	32869595	chr9:32836574-32869595	7	-	32836574	32836574	16724991	12	151,142,76,97,115,64,67,43,91,121,141,76,	0,5664,7338,15760,16135,17935,21153,23272,25437,26994,28491,32945,
#Deleted in new
chr9	32840597	32841762	chr9:32840597-32841762	3	-	32840597	32840597	8553170	2	269,282,	0,883,
#Deleted in new
chr9	32926050	32926450	chr9:32926050-32926450	7	+	32926050	32926050	16724991	1	400,	0,
#Deleted in new
chr9	32945995	32947222	chr9:32945995-32947222	7	+	32945995	32945995	16724991	1	1227,	0,
#Partially deleted in new
chr9	32972605	33001628	chr9:32972605-33001628	1	-	32973683	33001604	0	8	1083,104,227,60,303,47,137,62,	0,1852,12025,13365,14938,15477,17153,28961,
#Partially deleted in new
chr9	32972606	33001612	chr9:32972606-33001612	1	-	32973497	32989891	0	7	1046,104,227,60,188,137,97,	0,1851,12024,13364,14937,17152,28909,
#Partially deleted in new
chr9	32972606	33001576	chr9:32972606-33001576	3	-	32973497	32989891	0	8	1046,104,227,60,303,47,137,244,	0,1851,12024,13364,14937,15476,17152,28726,
#Partially deleted in new
chr9	32972615	33001607	chr9:32972615-33001607	1	-	32973497	33001604	0	8	1037,104,227,60,83,51,137,41,	0,1842,12015,13355,15144,15463,17143,28951,
#Partially deleted in new
chr9	32972615	33001521	chr9:32972615-33001521	0	-	32988107	32989891	0	8	1037,104,227,60,299,46,137,189,	0,1842,12015,13355,14928,15463,17143,28717,
#Partially deleted in new
chr9	32972617	32990088	chr9:32972617-32990088	1	-	32973497	32989891	0	7	1035,104,227,60,299,51,330,	0,1840,12013,13353,14926,15461,17141,
#Partially deleted in new
chr9	32972617	32990088	chr9:32972617-32990088	0	-	32988107	32989891	0	6	1035,104,60,299,46,330,	0,1840,13353,14926,15461,17141,
#Partially deleted in new
chr9	32972617	32990088	chr9:32972617-32990088	0	-	32987653	32989891	789624	7	1035,104,227,60,188,47,330,	0,1840,12013,13353,14926,15465,17141,
#Partially deleted in new
chr9	32972617	32990088	chr9:32972617-32990088	0	-	32988107	32989891	0	7	1035,104,227,60,299,46,330,	0,1840,12013,13353,14926,15461,17141,
#Partially deleted in new
chr9	32972617	32990088	chr9:32972617-32990088	0	-	32988107	32989891	0	6	1035,104,60,188,42,330,	0,1840,13353,14926,15465,17141,
#Partially deleted in new
chr9	32972617	32990088	chr9:32972617-32990088	0	-	32974525	32989891	0	6	1035,104,60,299,51,330,	0,1840,13353,14926,15461,17141,
#Partially deleted in new
chr9	32972617	32990088	chr9:32972617-32990088	0	-	32987653	32989891	789624	6	1035,104,60,188,47,330,	0,1840,13353,14926,15465,17141,
#Partially deleted in new
chr9	32972617	32990088	chr9:32972617-32990088	0	-	32988107	32989891	0	7	1035,104,227,60,188,42,330,	0,1840,12013,13353,14926,15465,17141,
#Partially deleted in new
chr9	32972748	33001604	chr9:32972748-33001604	1	-	32973497	33001604	0	8	904,104,227,60,299,51,137,38,	0,1709,11882,13222,14795,15330,17010,28818,
#Partially deleted in new
chr9	32972762	32997360	chr9:32972762-32997360	0	-	32988107	32989891	0	8	890,104,227,60,299,46,137,118,	0,1695,11868,13208,14781,15316,16996,24480,
#Partially deleted in new
chr9	32973164	32997331	chr9:32973164-32997331	1	-	32973497	32989891	0	8	488,104,227,60,299,51,137,89,	0,1293,11466,12806,14379,14914,16594,24078,
#Partially deleted in new
chr9	32973241	33001579	chr9:32973241-33001579	0	-	32984843	33001579	789624	6	411,104,227,60,137,13,	0,1216,11389,12729,16517,28325,
#Partially deleted in new
chr9	32973375	33001522	chr9:32973375-33001522	1	-	32973497	32989891	0	8	277,104,227,60,299,51,137,190,	0,1082,11255,12595,14168,14703,16383,27957,
#Partially deleted in new
chr9	32973375	33001641	chr9:32973375-33001641	1	-	32973497	33001604	0	7	277,104,227,60,188,137,75,	0,1082,11255,12595,14168,16383,28191,
#Partially deleted in new
chr9	32973395	33001612	chr9:32973395-33001612	1	-	32973497	33001604	789624	7	257,104,227,303,47,137,46,	0,1062,11235,14148,14687,16363,28171,
#Partially deleted in new
chr9	32973406	33025112	chr9:32973406-33025112	0	-	32988107	32989891	0	8	246,104,227,60,188,42,137,309,	0,1051,11224,12564,14137,14676,16352,51397,
#Deleted in new
chr9	32979559	32980403	chr9:32979559-32980403	7	-	32979559	32979559	16724991	1	844,	0,
#Partially deleted in new
chr9	32980387	32987762	chr9:32980387-32987762	0	-	32980387	32980387	8553170	4	50,227,60,219,	0,4243,5583,7156,
#Partially deleted in new
chr9	32984630	33001607	chr9:32984630-33001607	0	-	32984630	33001604	789624	6	227,60,83,51,137,41,	0,1340,3129,3448,5128,16936,
#Partially deleted in new
chr9	32984630	33001641	chr9:32984630-33001641	0	-	32984630	33001604	789624	5	227,60,188,137,75,	0,1340,2913,5128,16936,
#Partially deleted in new
chr9	32984658	33001619	chr9:32984658-33001619	0	-	32988107	33001604	789624	6	199,60,188,42,137,53,	0,1312,2885,3424,5100,16908,
#Partially deleted in new
chr9	32984658	33001619	chr9:32984658-33001619	0	-	32987653	33001604	789624	6	199,60,188,47,137,53,	0,1312,2885,3424,5100,16908,
#Partially deleted in new
chr9	32984714	33001597	chr9:32984714-33001597	0	-	32987820	32989891	789624	5	143,60,303,137,31,	0,1256,2829,5044,16852,
#Partially deleted in new
chr9	32984771	33001612	chr9:32984771-33001612	0	-	32984771	32989891	789624	5	86,60,188,137,97,	0,1199,2772,4987,16744,
#Partially deleted in new
chr9	32985988	32988134	chr9:32985988-32988134	0	-	32985988	32985988	8553170	2	42,591,	0,1555,
#Partially deleted in new
chr9	32987542	33025168	chr9:32987542-33025168	0	-	32987542	32987542	8553170	4	189,47,137,169,	0,540,2216,37457,
#Partially deleted in new
chr9	32987776	33001628	chr9:32987776-33001628	0	-	32987776	32987776	8553170	3	348,137,62,	0,1982,13790,
#Partially deleted in new
chr9	33015887	33025110	chr9:33015887-33025110	0	-	33015887	33015887	8553170	2	338,307,	0,8916,
#Deleted in new
chr9	33019681	33020165	chr9:33019681-33020165	7	-	33019681	33019681	16724991	1	484,	0,
#Partially deleted in new
chr9	33019953	33024987	chr9:33019953-33024987	0	-	33019953	33019953	8553170	2	213,184,	0,4850,
#Partially deleted in new
chr9	33025210	33039907	chr9:33025210-33039907	3	+	33026484	33038903	0	9	173,142,178,105,228,115,116,101,1223,	0,1264,1602,4674,5229,9005,11363,11804,13474,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	33025285	33038726	chr9:33025285-33038726	0	+	33025285	33025285	8553170	6	98,115,132,116,101,42,	0,8930,10840,11288,11729,13399,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	33034259	33037332	chr9:33034259-33037332	0	+	33034259	33034259	8553170	3	71,116,318,	0,2314,2755,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	33041763	33076659	chr9:33041763-33076659	3	-	33047292	33076608	0	12	5628,153,168,127,128,117,120,129,111,153,211,77,	0,6342,11359,14349,15073,15834,18701,20285,27060,29976,31832,34819,
#Partially deleted in new
chr9	33104081	33167356	chr9:33104081-33167356	1	-	33104751	33167169	789624	3	700,236,599,	0,31107,62676,
#Partially deleted in new
chr9	33110636	33167356	chr9:33110636-33167356	3	-	33113453	33167169	0	6	2950,105,123,188,236,599,	0,3137,5354,9782,24552,56121,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	33166974	33179710	chr9:33166974-33179710	0	+	33166974	33166974	789624	3	72,50,386,	0,10445,12350,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	33166974	33179983	chr9:33166974-33179983	3	+	33166974	33166974	789624	4	72,50,62,659,	0,10445,11921,12350,
#Deleted in new
chr9	33174169	33174295	chr9:33174169-33174295	3	+	33174169	33174169	8553170	1	126,	0,
#Partially deleted in new
chr9	33218364	33248552	chr9:33218364-33248552	1	+	33220978	33248471	789624	5	95,157,41,113,127,	0,2587,26747,28251,30061,
#Partially deleted in new
chr9	33240163	33248567	chr9:33240163-33248567	3	+	33240208	33248471	789624	4	106,41,113,142,	0,4948,6452,8262,
#Partially deleted in new
chr9	33247819	33256806	chr9:33247819-33256806	0	-	33247819	33247819	8553170	4	347,110,63,6,	0,492,8045,8981,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	33252470	33264674	chr9:33252470-33264674	1	-	33255218	33264674	789624	7	2838,63,108,114,83,129,451,	0,3394,4330,6449,8616,10231,11753,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	33255024	33260441	chr9:33255024-33260441	0	-	33255024	33255024	8553170	4	284,63,108,1522,	0,840,1776,3895,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	33255024	33260488	chr9:33255024-33260488	0	-	33255024	33255024	8553170	5	284,63,108,114,604,	0,840,1776,3895,4860,
#Partially deleted in new
chr9	33255025	33264571	chr9:33255025-33264571	1	-	33255218	33264329	0	7	283,63,108,114,83,129,348,	0,839,1775,3894,6061,7676,9198,
#Partially deleted in new
chr9	33255048	33264720	chr9:33255048-33264720	0	-	33259010	33264329	789624	8	260,63,108,114,83,142,129,497,	0,816,1752,3871,6038,7056,7653,9175,
#Partially deleted in new
chr9	33255218	33264674	chr9:33255218-33264674	3	-	33255218	33264674	0	7	90,63,108,114,83,129,451,	0,646,1582,3701,5868,7483,9005,
#Deleted in new
chr9	33255863	33257671	chr9:33255863-33257671	0	-	33255863	33255863	8553170	2	64,871,	0,937,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	33257719	33261119	chr9:33257719-33261119	0	-	33258078	33261119	789624	3	404,114,33,	0,1200,3367,
#Partially deleted in new
chr9	33258918	33264559	chr9:33258918-33264559	0	-	33258918	33264329	789624	4	115,83,129,354,	0,2168,3783,5287,
#Partially deleted in new
chr9	33262217	33264705	chr9:33262217-33264705	0	-	33262217	33264329	789624	3	29,129,500,	0,484,1988,
#Deleted in new
chr9	33262740	33264670	chr9:33262740-33264670	0	-	33262740	33264329	789624	2	90,395,	0,1535,
#Partially deleted in new
chr9	33264878	33282069	chr9:33264878-33282069	1	+	33265078	33280828	0	7	269,105,47,94,72,109,1261,	0,1131,2974,5744,6273,11577,15930,
#Partially deleted in new
chr9	33264941	33281539	chr9:33264941-33281539	3	+	33265078	33280859	0	8	206,105,47,94,72,109,113,731,	0,1068,2911,5681,6210,11514,13171,15867,
#Partially deleted in new
chr9	33277792	33280951	chr9:33277792-33280951	0	+	33277792	33277792	8553170	2	433,143,	0,3016,
#Partially deleted in new
chr9	33290510	33371157	chr9:33290510-33371157	3	+	33290572	33369978	789624	24	87,1008,159,78,106,72,140,100,218,98,31,80,109,120,80,231,74,102,42,99,67,146,105,1252,	0,3909,10752,12680,16683,20595,23143,28220,28399,38070,41961,47999,52235,53558,56527,61049,62135,63575,64340,73499,74197,76118,77004,79395,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr9	33290511	33365283	chr9:33290511-33365283	0	+	33290511	33290511	8553170	21	86,1008,159,78,106,72,140,100,218,98,31,80,109,120,80,231,74,102,42,99,576,	0,3908,10751,12679,16682,20594,23142,28219,28398,38069,41960,47998,52234,53557,56526,61048,62134,63574,64339,73498,74196,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr9	33290544	33348723	chr9:33290544-33348723	1	+	33290572	33347740	789624	16	53,1008,159,78,106,72,140,100,218,98,31,80,109,120,80,1061,	0,3875,10718,12646,16649,20561,23109,28186,28365,38036,41927,47965,52201,53524,56493,57118,
#Partially deleted in new
chr9	33319020	33332657	chr9:33319020-33332657	0	+	33319020	33319020	8553170	3	107,98,186,	0,9560,13451,
#Partially deleted in new
chr9	33342811	33351882	chr9:33342811-33351882	0	+	33342811	33342811	8553170	4	43,120,80,323,	0,1257,4226,8748,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	33352787	33352874	chr9:33352787-33352874	3	-	33352787	33352787	8553170	1	87,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	33365232	33367578	chr9:33365232-33367578	0	+	33365232	33365232	8553170	3	777,146,64,	0,1396,2282,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	33383178	33395245	chr9:33383178-33395245	1	-	33385004	33395218	789624	6	2112,218,119,138,124,168,	0,2470,2898,3225,3790,11899,
#Partially deleted in new
chr9	33384766	33402514	chr9:33384766-33402514	0	-	33386529	33401262	789624	6	1100,119,138,118,51,142,	0,1310,1637,10311,16470,17606,
#Partially deleted in new
chr9	33384949	33402519	chr9:33384949-33402519	2	-	33385004	33401262	789624	8	341,218,119,138,124,118,51,147,	0,699,1127,1454,2019,10128,16287,17423,
#Partially deleted in new
chr9	33384949	33402508	chr9:33384949-33402508	1	-	33385152	33387065	789624	7	282,218,119,138,124,51,136,	0,699,1127,1454,2019,16287,17423,
#Partially deleted in new
chr9	33385208	33402554	chr9:33385208-33402554	0	-	33385208	33385208	8553170	4	23,218,51,182,	0,440,16028,17164,
#Partially deleted in new
chr9	33385248	33395235	chr9:33385248-33395235	0	-	33385248	33386533	789624	5	42,218,119,138,158,	0,400,828,1155,9829,
#Partially deleted in new
chr9	33385343	33395235	chr9:33385343-33395235	1	-	33385617	33395218	789624	5	523,119,138,124,158,	0,733,1060,1625,9734,
#Partially deleted in new
chr9	33385360	33402586	chr9:33385360-33402586	1	-	33385617	33401262	789624	7	506,119,138,124,118,51,214,	0,716,1043,1608,9717,15876,17012,
#Partially deleted in new
chr9	33385379	33402496	chr9:33385379-33402496	0	-	33395413	33401262	789624	7	487,119,138,124,436,51,124,	0,697,1024,1589,9698,15857,16993,
#Partially deleted in new
chr9	33385457	33402682	chr9:33385457-33402682	0	-	33386529	33401262	789624	5	409,138,118,51,310,	0,946,9620,15779,16915,
#Partially deleted in new
chr9	33385505	33394176	chr9:33385505-33394176	1	-	33385617	33386533	789624	4	361,119,138,380,	0,571,898,8291,
#Partially deleted in new
chr9	33385564	33391573	chr9:33385564-33391573	0	-	33385564	33385564	8553170	4	302,119,138,118,	0,512,839,5891,
#Partially deleted in new
chr9	33385564	33402466	chr9:33385564-33402466	0	-	33394163	33401262	789624	7	302,119,138,151,118,51,94,	0,512,839,8562,9513,15672,16808,
#Partially deleted in new
chr9	33385590	33395268	chr9:33385590-33395268	0	-	33394163	33395218	789624	5	276,119,138,151,191,	0,486,813,8536,9487,
#Partially deleted in new
chr9	33385768	33402680	chr9:33385768-33402680	0	-	33385768	33401262	789624	4	98,118,51,308,	0,9309,15468,16604,
#Partially deleted in new
chr9	33386174	33395234	chr9:33386174-33395234	0	-	33386174	33386174	8553170	2	367,157,	0,8903,
#Partially deleted in new
chr9	33386504	33401880	chr9:33386504-33401880	0	-	33386504	33386504	8553170	4	37,118,51,345,	0,8573,14732,15031,
#Partially deleted in new
chr9	33394271	33402645	chr9:33394271-33402645	0	-	33394271	33401262	789624	5	6,118,51,137,273,	0,806,6965,7264,8101,
#Partially deleted in new
chr9	33401001	33402652	chr9:33401001-33402652	0	-	33401001	33401001	8553170	2	286,280,	0,1371,
#Partially deleted in new
chr9	33402856	33409948	chr9:33402856-33409948	3	+	33402856	33402856	8553170	3	222,64,67,	0,1430,7025,
#Partially deleted in new
chr9	33441153	33447633	chr9:33441153-33447633	3	-	33442042	33447530	789624	6	1058,218,119,138,127,211,	0,1147,1698,2167,2612,6269,
#Partially deleted in new
chr9	33441155	33447596	chr9:33441155-33447596	0	-	33441155	33441155	8553170	2	2737,174,	0,6267,
#Deleted in new
chr9	33441789	33443109	chr9:33441789-33443109	0	-	33441789	33441789	8553170	3	422,218,258,	0,511,1062,
#Partially deleted in new
chr9	33441807	33447553	chr9:33441807-33447553	1	-	33441989	33447530	789624	5	404,119,138,127,131,	0,1044,1513,1958,5615,
#Partially deleted in new
chr9	33442303	33447582	chr9:33442303-33447582	0	-	33442303	33442303	8553170	4	215,607,127,160,	0,548,1462,5119,
#Partially deleted in new
chr9	33442380	33447509	chr9:33442380-33447509	0	-	33443204	33447509	789624	5	138,119,280,127,87,	0,471,798,1385,5042,
#Partially deleted in new
chr9	33442864	33447596	chr9:33442864-33447596	0	-	33443406	33447530	789624	4	106,160,127,174,	0,456,901,4558,
#Deleted in new
chr9	33449754	33449941	chr9:33449754-33449941	7	+	33449754	33449754	16724991	1	187,	0,
#Partially deleted in new
chr9	33461440	33473930	chr9:33461440-33473930	0	-	33462663	33473842	789624	16	1373,76,149,123,178,116,102,59,121,164,135,169,180,117,207,142,	0,5471,5673,5953,6250,6589,6880,7067,7311,7517,7766,8058,8571,10563,10765,12348,
#Partially deleted in new
chr9	33461451	33473930	chr9:33461451-33473930	2	-	33462663	33473842	789624	26	1362,102,195,90,125,98,153,164,155,118,141,76,149,123,178,116,102,59,121,164,135,169,180,117,207,142,	0,1581,1795,2379,2585,3427,3755,4282,4619,4856,5117,5460,5662,5942,6239,6578,6869,7056,7300,7506,7755,8047,8560,10552,10754,12337,
#Partially deleted in new
chr9	33461451	33465194	chr9:33461451-33465194	0	-	33462663	33464102	789624	6	1362,102,195,90,125,316,	0,1581,1795,2379,2585,3427,
#Partially deleted in new
chr9	33461451	33473930	chr9:33461451-33473930	1	-	33462181	33473842	789624	24	761,90,125,98,153,164,155,118,141,76,149,123,178,116,102,59,121,164,135,169,180,117,207,142,	0,2379,2585,3427,3755,4282,4619,4856,5117,5460,5662,5942,6239,6578,6869,7056,7300,7506,7755,8047,8560,10552,10754,12337,
#Partially deleted in new
chr9	33462113	33473902	chr9:33462113-33473902	0	-	33462113	33462113	8553170	7	149,93,164,985,117,207,114,	0,6666,6844,7093,9890,10092,11675,
#Partially deleted in new
chr9	33467868	33467935	chr9:33467868-33467935	3	-	33467868	33467868	5263520	1	67,	0,
#Partially deleted in new
chr9	33503654	33510711	chr9:33503654-33510711	7	-	33503654	33503654	16724991	5	189,54,71,70,92,	0,883,4704,5475,6965,
#Partially deleted in new
chr9	33524393	33573001	chr9:33524393-33573001	3	+	33524489	33572360	789624	16	302,115,174,107,138,68,81,74,918,150,113,130,282,212,223,686,	0,4333,4606,9045,9976,12484,16753,18788,23544,26036,31314,33664,41825,42709,44277,47922,
#Partially deleted in new
chr9	33528631	33533847	chr9:33528631-33533847	0	+	33528631	33528631	8553170	2	210,409,	0,4807,
#Partially deleted in new
chr9	33533441	33539558	chr9:33533441-33539558	0	+	33533441	33533441	8553170	4	104,138,68,110,	0,928,3436,6007,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	33533485	33541227	chr9:33533485-33541227	0	+	33533485	33533485	8553170	6	60,138,68,54,135,81,	0,884,3392,5963,6592,7661,
#Partially deleted in new
chr9	33536886	33547949	chr9:33536886-33547949	0	+	33536886	33547949	789624	4	59,81,71,12,	0,4260,6298,11051,
#Partially deleted in new
chr9	33548831	33573009	chr9:33548831-33573009	0	+	33548831	33571317	789624	8	24,150,113,130,282,212,223,1764,	0,1598,6876,9226,17387,18271,19839,22414,
#Deleted in new
chr9	33566971	33568885	chr9:33566971-33568885	0	+	33566971	33566971	8553170	2	343,215,	0,1699,
#Deleted in new
chr9	33567102	33569126	chr9:33567102-33569126	0	+	33567102	33568941	789624	2	212,456,	0,1568,
#Deleted in new
chr9	33574360	33574588	chr9:33574360-33574588	7	-	33574360	33574360	16724991	1	228,	0,
#Deleted in new
chr9	33576379	33577014	chr9:33576379-33577014	7	+	33576379	33576379	16724991	1	635,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	33580694	33605282	chr9:33580694-33605282	3	+	33580694	33580694	8553170	5	68,125,108,279,272,	0,21806,22117,22577,24316,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	33603339	33605293	chr9:33603339-33605293	0	+	33603339	33603339	8553170	3	211,107,283,	0,957,1671,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	33604296	33605277	chr9:33604296-33605277	0	+	33604296	33604296	8553170	2	274,267,	0,714,
#Deleted in new
chr9	33613847	33614009	chr9:33613847-33614009	7	-	33613847	33613847	16724991	1	162,	0,
#Deleted in new
chr9	33617761	33618506	chr9:33617761-33618506	3	+	33617787	33618506	789624	2	114,302,	0,443,
#Deleted in new
chr9	33624273	33625293	chr9:33624273-33625293	7	+	33624273	33624273	16724991	1	1020,	0,
#Deleted in new
chr9	33629120	33629586	chr9:33629120-33629586	7	+	33629120	33629120	16724991	2	71,296,	0,170,
#Deleted in new
chr9	33634110	33634246	chr9:33634110-33634246	7	+	33634110	33634110	16724991	1	136,	0,
#Deleted in new
chr9	33638034	33638494	chr9:33638034-33638494	7	+	33638034	33638034	16724991	2	51,284,	0,176,
#Deleted in new
chr9	33649046	33649614	chr9:33649046-33649614	7	+	33649046	33649046	16724991	2	133,302,	0,266,
#Deleted in new
chr9	33662165	33662663	chr9:33662165-33662663	7	+	33662165	33662165	16724991	2	86,288,	0,210,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	33673503	33677499	chr9:33673503-33677499	7	-	33673503	33673503	16724991	1	3996,	0,
#Deleted in new
chr9	33675436	33676651	chr9:33675436-33676651	5	-	33675436	33675436	16724991	1	1215,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	33677267	33688011	chr9:33677267-33688011	3	+	33677267	33677267	789624	4	242,198,180,253,	0,822,3626,10491,
#Deleted in new
chr9	33695766	33696059	chr9:33695766-33696059	7	+	33695766	33695766	16724991	1	293,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	33697458	33700986	chr9:33697458-33700986	3	+	33697458	33697458	8553170	1	3528,	0,
#Deleted in new
chr9	33719689	33722555	chr9:33719689-33722555	3	+	33719689	33719689	8553170	2	179,965,	0,1901,
#Partially deleted in new
chr9	33732974	33738416	chr9:33732974-33738416	0	-	33732974	33732974	8553170	2	270,129,	0,5313,
#Partially deleted in new
chr9	33732974	33738416	chr9:33732974-33738416	3	-	33732974	33732974	789624	2	357,129,	0,5313,
#Partially deleted in new
chr9	33750465	33799230	chr9:33750465-33799230	1	+	33794791	33799180	0	6	262,128,160,254,137,203,	0,44280,46177,47363,48020,48562,
#Partially deleted in new
chr9	33750516	33799231	chr9:33750516-33799231	1	+	33750516	33799180	0	5	211,160,254,137,204,	0,46126,47312,47969,48511,
#Partially deleted in new
chr9	33750678	33797924	chr9:33750678-33797924	0	+	33750678	33750678	8553170	4	49,107,160,96,	0,11378,45964,47150,
#Partially deleted in new
chr9	33750689	33798528	chr9:33750689-33798528	0	+	33794797	33798528	789624	5	38,128,160,254,43,	0,44056,45953,47139,47796,
#Partially deleted in new
chr9	33750820	33799230	chr9:33750820-33799230	1	+	33750833	33799180	0	5	32,160,254,137,203,	0,45822,47008,47665,48207,
#Partially deleted in new
chr9	33785949	33818795	chr9:33785949-33818795	3	-	33785949	33785949	8553170	4	161,190,127,169,	0,12418,13837,32677,
#Deleted in new
chr9	33786220	33786828	chr9:33786220-33786828	7	+	33786220	33786220	16724991	2	32,301,	0,307,
#Partially deleted in new
chr9	33795534	33799231	chr9:33795534-33799231	3	+	33795573	33799180	0	5	79,160,254,137,204,	0,1108,2294,2951,3493,
#Partially deleted in new
chr9	33795569	33797977	chr9:33795569-33797977	0	+	33795569	33795569	8553170	2	44,149,	0,2259,
#Deleted in new
chr9	33798517	33799229	chr9:33798517-33799229	0	+	33798517	33798517	8553170	2	234,374,	0,338,
#Partially deleted in new
chr9	33817566	33920404	chr9:33817566-33920404	3	+	33817757	33917237	789624	5	368,87,98,135,3387,	0,69314,82607,94397,99451,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	33830977	33831078	chr9:33830977-33831078	3	+	33830977	33830977	8553170	1	101,	0,
#Deleted in new
chr9	33868539	33868665	chr9:33868539-33868665	3	+	33868539	33868539	8553170	1	126,	0,
#Partially deleted in new
chr9	33921692	34048949	chr9:33921692-34048949	3	-	33922503	34017148	789624	29	907,192,68,108,100,206,79,48,92,196,67,139,40,214,170,275,214,190,68,53,66,104,55,78,154,111,78,140,72,	0,994,1273,1493,1686,2102,2513,4924,5296,6104,10869,11797,14146,19956,21727,22672,26681,31592,34386,39133,42033,49958,51490,65067,67280,74530,77094,95357,127185,
#Partially deleted in new
chr9	33921692	34048901	chr9:33921692-34048901	1	-	33922503	34017148	789624	29	907,192,68,108,100,206,79,48,92,196,67,139,40,214,170,275,214,190,68,53,66,104,55,78,154,111,78,140,77,	0,994,1273,1493,1686,2102,2513,4924,5296,6104,10869,11797,14146,19956,21727,22672,26681,31592,34386,39133,42033,49958,51490,65067,67280,74530,77094,95357,127132,
#Partially deleted in new
chr9	33921692	33934364	chr9:33921692-33934364	1	-	33922503	33927884	789624	13	907,192,68,108,100,206,79,48,92,196,67,139,311,	0,994,1273,1493,1686,2102,2513,4924,5296,6104,10869,11797,12361,
#Partially deleted in new
chr9	33921858	33928835	chr9:33921858-33928835	0	-	33921858	33921858	8553170	10	741,192,68,108,100,206,79,48,92,1039,	0,828,1107,1327,1520,1936,2347,4758,5130,5938,
#Partially deleted in new
chr9	33922140	34048887	chr9:33922140-34048887	0	-	33953468	33998849	789624	25	459,192,68,108,100,206,79,48,92,196,67,139,40,214,170,275,214,190,53,66,78,154,111,78,63,	0,546,825,1045,1238,1654,2065,4476,4848,5656,10421,11349,13698,19508,21279,22224,26233,31144,38685,41585,64619,66832,74082,76646,126684,
#Partially deleted in new
chr9	33923824	33934354	chr9:33923824-33934354	0	-	33923824	33923824	8553170	9	176,79,48,92,196,241,67,139,301,	0,381,2792,3164,3972,4547,8737,9665,10229,
#Partially deleted in new
chr9	33927026	33941711	chr9:33927026-33941711	0	-	33927880	33941711	789624	5	54,196,139,40,63,	0,770,6463,8812,14622,
#Deleted in new
chr9	33934295	33934376	chr9:33934295-33934376	3	-	33934295	33934295	789624	1	81,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	33935321	33948966	chr9:33935321-33948966	0	-	33935321	33935321	8553170	5	557,214,170,275,593,	0,6327,8098,9043,13052,
#Partially deleted in new
chr9	33944514	34048949	chr9:33944514-34048949	0	-	33944514	34017148	789624	12	125,214,190,68,53,66,78,154,111,78,140,72,	0,3859,8770,11564,16311,19211,42245,44458,51708,54272,72535,104363,
#Partially deleted in new
chr9	33948373	33989043	chr9:33948373-33989043	0	-	33948373	33989043	789624	8	214,190,68,53,104,55,78,71,	0,4911,7705,12452,23277,24809,38386,40599,
#Deleted in new
chr9	33952768	33952850	chr9:33952768-33952850	3	-	33952768	33952768	789624	1	82,	0,
#Deleted in new
chr9	33968070	33968518	chr9:33968070-33968518	7	-	33968070	33968070	16724991	1	448,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	33994480	34048872	chr9:33994480-34048872	0	-	33994480	33994480	8553170	3	4384,140,48,	0,22569,54344,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	33996477	34048887	chr9:33996477-34048887	0	-	33996477	33996477	8553170	4	2387,38,140,63,	0,15149,20572,52347,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	34049965	34050244	chr9:34049965-34050244	3	+	34049965	34049965	8553170	1	279,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	34084331	34096225	chr9:34084331-34096225	3	+	34084331	34084331	8553170	3	81,177,377,	0,5473,11517,
#Partially deleted in new
chr9	34086386	34126773	chr9:34086386-34126773	3	-	34088349	34126431	0	9	2122,179,163,66,194,61,207,255,420,	0,3025,6899,10329,11937,20047,20972,38636,39967,
#Partially deleted in new
chr9	34089411	34093779	chr9:34089411-34093779	0	-	34089411	34089411	8553170	2	179,494,	0,3874,
#Partially deleted in new
chr9	34098383	34127399	chr9:34098383-34127399	0	-	34098383	34127277	789624	5	134,61,207,255,146,	0,8050,8975,26639,28870,
#Partially deleted in new
chr9	34098487	34125727	chr9:34098487-34125727	0	-	34098487	34125619	789624	5	30,61,207,255,123,	0,7946,8871,26535,27117,
#Partially deleted in new
chr9	34107360	34125703	chr9:34107360-34125703	0	-	34107360	34107360	8553170	3	205,255,222,	0,17662,18121,
#Partially deleted in new
chr9	34109170	34109968	chr9:34109170-34109968	7	-	34109170	34109170	16724991	1	798,	0,
#Partially deleted in new
chr9	34133156	34134696	chr9:34133156-34134696	7	-	34133156	34133156	16724991	1	1540,	0,
#Partially deleted in new
chr9	34179004	34251850	chr9:34179004-34251850	1	+	34179014	34251532	0	6	236,125,924,183,102,459,	0,55211,62180,70774,71653,72387,
#Partially deleted in new
chr9	34179012	34252523	chr9:34179012-34252523	3	+	34220914	34251532	0	7	228,41,125,924,183,102,1132,	0,41895,55203,62172,70766,71645,72379,
#Partially deleted in new
chr9	34179037	34252520	chr9:34179037-34252520	1	+	34220914	34251532	0	6	203,41,125,924,102,1129,	0,41870,55178,62147,71620,72354,
#Partially deleted in new
chr9	34179044	34251698	chr9:34179044-34251698	0	+	34179044	34251532	789624	6	196,41,924,183,102,307,	0,41863,62140,70734,71613,72347,
#Deleted in new
chr9	34191554	34191881	chr9:34191554-34191881	7	+	34191554	34191554	16724991	1	327,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	34201272	34201515	chr9:34201272-34201515	7	-	34201272	34201272	16724991	3	63,60,114,	0,67,129,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	34206133	34206241	chr9:34206133-34206241	7	-	34206133	34206133	16724991	1	108,	0,
#Partially deleted in new
chr9	34223983	34224628	chr9:34223983-34224628	7	-	34223983	34223983	16724991	1	645,	0,
#Partially deleted in new
chr9	34252380	34311371	chr9:34252380-34311371	1	-	34254379	34311346	789624	9	2140,94,2247,110,72,106,122,190,648,	0,2691,3354,7215,10720,16876,19428,53871,58343,
#Partially deleted in new
chr9	34252380	34311371	chr9:34252380-34311371	3	-	34254379	34311346	789624	12	2140,94,2247,110,72,106,122,88,216,98,190,648,	0,2691,3354,7215,10720,16876,19428,34236,37793,44636,53871,58343,
#Deleted in new
chr9	34318406	34319655	chr9:34318406-34319655	7	+	34318406	34318406	16724991	1	1249,	0,
#Partially deleted in new
chr9	34329505	34343711	chr9:34329505-34343711	1	+	34339039	34343440	0	4	94,135,143,588,	0,9207,9518,13618,
#Partially deleted in new
chr9	34329505	34343711	chr9:34329505-34343711	1	+	34339039	34343440	0	5	94,42,135,143,588,	0,6794,9207,9518,13618,
#Partially deleted in new
chr9	34329505	34343713	chr9:34329505-34343713	3	+	34339039	34343440	0	5	94,113,135,143,590,	0,6723,9207,9518,13618,
#Partially deleted in new
chr9	34329505	34343711	chr9:34329505-34343711	1	+	34339039	34343440	0	3	94,143,588,	0,9518,13618,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	34366669	34376853	chr9:34366669-34376853	3	-	34370798	34372943	789624	2	6337,61,	0,10123,
#Deleted in new
chr9	34372067	34372832	chr9:34372067-34372832	0	-	34372067	34372832	789624	2	264,216,	0,549,
#Partially deleted in new
chr9	34379018	34397832	chr9:34379018-34397832	3	-	34379645	34397633	789624	7	163,87,230,76,116,145,334,	0,627,1883,2350,3735,6618,18480,
#Deleted in new
chr9	34379018	34381531	chr9:34379018-34381531	1	-	34379075	34381435	789624	4	163,87,235,163,	0,627,1878,2350,
#Deleted in new
chr9	34379018	34381538	chr9:34379018-34381538	1	-	34379075	34381435	789624	4	163,87,76,170,	0,627,2037,2350,
#Deleted in new
chr9	34379018	34381560	chr9:34379018-34381560	1	-	34379075	34381435	789624	5	163,87,235,76,35,	0,627,1878,2350,2507,
#Deleted in new
chr9	34379018	34381600	chr9:34379018-34381600	1	-	34379645	34381435	789624	4	163,87,230,232,	0,627,1883,2350,
#Deleted in new
chr9	34379018	34379775	chr9:34379018-34379775	0	-	34379018	34379018	8553170	2	163,130,	0,627,
#Partially deleted in new
chr9	34382669	34397529	chr9:34382669-34397529	0	-	34382669	34397529	789624	3	200,145,31,	0,2967,14829,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	34398183	34458552	chr9:34398183-34458552	1	-	34400963	34458260	789624	6	2936,55,81,103,100,316,	0,3482,4203,4521,7681,60053,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	34398183	34458552	chr9:34398183-34458552	1	-	34400963	34458260	789624	6	2939,55,81,103,49,316,	0,3482,4203,4521,7732,60053,
#Partially deleted in new
chr9	34398183	34458552	chr9:34398183-34458552	1	-	34398289	34458260	789624	7	161,95,55,81,103,49,349,	0,2844,3482,4203,4521,7732,60020,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	34398183	34458552	chr9:34398183-34458552	1	-	34400963	34458260	789624	6	2936,55,81,103,49,349,	0,3482,4203,4521,7732,60020,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	34398183	34458552	chr9:34398183-34458552	1	-	34400963	34458260	789624	6	2936,55,81,103,100,349,	0,3482,4203,4521,7681,60020,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	34398184	34458570	chr9:34398184-34458570	1	-	34400963	34458263	789624	6	2938,55,81,103,100,367,	0,3481,4202,4520,7680,60019,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	34398189	34458570	chr9:34398189-34458570	3	-	34400963	34458263	789624	6	2933,55,81,103,49,367,	0,3476,4197,4515,7726,60014,
#Partially deleted in new
chr9	34401012	34458552	chr9:34401012-34458552	0	-	34401012	34458260	789624	6	110,55,81,103,100,349,	0,653,1374,1692,4852,57191,
#Partially deleted in new
chr9	34402249	34458552	chr9:34402249-34458552	1	-	34402256	34458260	789624	4	218,103,100,349,	0,455,3615,55954,
#Partially deleted in new
chr9	34457413	34488537	chr9:34457413-34488537	0	+	34457413	34457413	8553170	5	47,33,103,81,592,	0,26034,27728,28023,30532,
#Partially deleted in new
chr9	34458751	34520988	chr9:34458751-34520988	3	+	34459005	34520756	789624	20	302,33,99,81,127,125,120,60,135,85,118,44,248,90,88,80,149,100,183,331,	0,24696,26390,26685,30571,31248,31617,32743,34442,38363,41970,42386,47875,53357,53585,54360,55642,55888,58533,61906,
#Partially deleted in new
chr9	34458834	34520989	chr9:34458834-34520989	1	+	34459005	34520756	789624	20	219,33,99,81,127,113,120,60,135,85,118,44,248,90,88,80,149,100,183,332,	0,24613,26307,26602,30488,31177,31534,32660,34359,38280,41887,42303,47792,53274,53502,54277,55559,55805,58450,61823,
#Partially deleted in new
chr9	34458834	34497199	chr9:34458834-34497199	0	+	34459005	34497199	789624	9	219,99,81,127,113,120,60,135,85,	0,26307,26602,30488,31177,31534,32660,34359,38280,
#Deleted in new
chr9	34478621	34478905	chr9:34478621-34478905	3	+	34478621	34478621	8553170	1	284,	0,
#Partially deleted in new
chr9	34485045	34493328	chr9:34485045-34493328	0	+	34485045	34485045	8553170	9	195,81,73,28,127,113,120,60,135,	0,391,2900,4128,4277,4966,5323,6449,8148,
#Partially deleted in new
chr9	34491342	34493221	chr9:34491342-34493221	0	+	34491342	34491342	8553170	2	212,28,	0,1851,
#Partially deleted in new
chr9	34506626	34517467	chr9:34506626-34517467	0	+	34506626	34514660	789624	6	248,90,88,80,100,183,	0,5482,5710,6485,8013,10658,
#Partially deleted in new
chr9	34513111	34520984	chr9:34513111-34520984	0	+	34513111	34520756	789624	4	80,149,100,327,	0,1282,1528,7546,
#Partially deleted in new
chr9	34513143	34517467	chr9:34513143-34517467	0	+	34513143	34513143	8553170	3	48,346,183,	0,1250,4141,
#Deleted in new
chr9	34521039	34523041	chr9:34521039-34523041	3	-	34521464	34521695	789624	2	817,265,	0,1737,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	34521526	34524241	chr9:34521526-34524241	3	+	34521526	34521526	8553170	3	217,140,274,	0,730,2441,
#Deleted in new
chr9	34546523	34546996	chr9:34546523-34546996	7	-	34546523	34546523	16724991	1	473,	0,
#Partially deleted in new
chr9	34551431	34589706	chr9:34551431-34589706	1	-	34552070	34568981	0	9	640,169,181,164,167,118,234,85,152,	0,729,1242,4823,6094,6435,13167,17465,38123,
#Partially deleted in new
chr9	34551431	34589737	chr9:34551431-34589737	1	-	34552070	34568981	0	10	640,169,181,164,167,118,234,85,111,183,	0,729,1242,4823,6094,6435,13167,17465,29663,38123,
#Partially deleted in new
chr9	34551433	34590140	chr9:34551433-34590140	3	-	34552070	34568981	0	10	638,169,181,164,167,118,234,85,111,59,	0,727,1240,4821,6092,6433,13165,17463,29661,38648,
#Partially deleted in new
chr9	34556254	34590123	chr9:34556254-34590123	0	-	34556254	34568981	789624	7	164,167,118,234,85,111,42,	0,1271,1612,8344,12642,24840,33827,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	34568014	34582649	chr9:34568014-34582649	1	+	34568014	34568014	8553170	5	143,235,97,102,315,	0,1497,3333,12085,14320,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	34568014	34582829	chr9:34568014-34582829	0	+	34568014	34568014	789624	2	143,495,	0,14320,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	34568014	34582809	chr9:34568014-34582809	3	+	34568014	34568014	8553170	3	143,105,475,	0,1497,14320,
#Deleted in new
chr9	34569590	34570125	chr9:34569590-34570125	0	+	34569590	34569590	8553170	2	156,110,	0,425,
#Deleted in new
chr9	34610485	34612104	chr9:34610485-34612104	1	-	34610804	34611296	789624	2	847,245,	0,1374,
#Deleted in new
chr9	34610485	34612104	chr9:34610485-34612104	3	-	34610804	34611296	789624	2	847,41,	0,1578,
#Partially deleted in new
chr9	34613544	34620523	chr9:34613544-34620523	1	-	34613781	34620464	789624	6	327,60,59,87,85,155,	0,497,1165,4340,5131,6824,
#Deleted in new
chr9	34613545	34615011	chr9:34613545-34615011	0	-	34613545	34613545	8553170	3	326,60,302,	0,496,1164,
#Partially deleted in new
chr9	34613550	34620480	chr9:34613550-34620480	3	-	34613781	34620464	789624	7	321,60,59,84,87,85,112,	0,491,1159,2479,4334,5125,6818,
#Partially deleted in new
chr9	34613550	34620474	chr9:34613550-34620474	1	-	34614078	34620464	789624	7	321,157,59,84,87,85,106,	0,491,1159,2479,4334,5125,6818,
#Partially deleted in new
chr9	34613550	34620443	chr9:34613550-34620443	0	-	34613781	34620443	789624	6	321,60,59,87,85,75,	0,491,1159,4334,5125,6818,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	34613550	34616743	chr9:34613550-34616743	0	-	34613550	34613550	8553170	2	321,2702,	0,491,
#Partially deleted in new
chr9	34613603	34620468	chr9:34613603-34620468	1	-	34613781	34620464	789624	6	298,59,84,87,85,100,	0,1106,2426,4281,5072,6765,
#Deleted in new
chr9	34613731	34614740	chr9:34613731-34614740	0	-	34613731	34613731	8553170	2	370,31,	0,978,
#Partially deleted in new
chr9	34614041	34616452	chr9:34614041-34616452	0	-	34614041	34614041	8553170	3	60,59,423,	0,668,1988,
#Partially deleted in new
chr9	34614186	34620481	chr9:34614186-34620481	1	-	34614691	34620464	789624	5	582,84,87,85,113,	0,1843,3698,4489,6182,
#Deleted in new
chr9	34617670	34620464	chr9:34617670-34620464	0	-	34617670	34620464	789624	3	301,85,96,	0,1005,2698,
#Partially deleted in new
chr9	34621378	34628107	chr9:34621378-34628107	3	-	34621457	34628014	789624	7	180,90,183,290,184,73,411,	0,641,968,2046,2485,4363,6318,
#Partially deleted in new
chr9	34634721	34637771	chr9:34634721-34637771	3	-	34635631	34637697	0	4	1137,93,201,225,	0,2275,2498,2825,
#Partially deleted in new
chr9	34634721	34637744	chr9:34634721-34637744	0	-	34637073	34637697	0	4	1137,93,154,198,	0,2275,2545,2825,
#Partially deleted in new
chr9	34634721	34637732	chr9:34634721-34637732	1	-	34635631	34637304	789624	3	1137,93,513,	0,2275,2498,
#Partially deleted in new
chr9	34635482	34637809	chr9:34635482-34637809	1	-	34635631	34637697	0	3	376,201,263,	0,1737,2064,
#Partially deleted in new
chr9	34635496	34637796	chr9:34635496-34637796	0	-	34635496	34635496	8553170	2	362,577,	0,1723,
#Partially deleted in new
chr9	34635809	34637683	chr9:34635809-34637683	0	-	34635809	34635809	8553170	3	49,424,137,	0,1187,1737,
#Deleted in new
chr9	34636750	34637412	chr9:34636750-34637412	0	-	34636750	34636750	8553170	2	339,146,	0,516,
#Partially deleted in new
chr9	34638132	34647146	chr9:34638132-34647146	0	+	34638132	34638132	8553170	2	208,470,	0,8544,
#Partially deleted in new
chr9	34646588	34650598	chr9:34646588-34650598	1	+	34647208	34650449	0	9	198,170,130,57,123,133,84,155,230,	0,500,1243,1526,1745,2173,2409,2821,3780,
#Deleted in new
chr9	34646632	34647517	chr9:34646632-34647517	0	+	34646632	34646632	8553170	2	154,397,	0,488,
#Partially deleted in new
chr9	34646635	34650529	chr9:34646635-34650529	0	+	34646704	34647834	789624	9	151,170,130,57,123,133,84,155,161,	0,453,1196,1479,1698,2126,2362,2774,3733,
#Deleted in new
chr9	34646637	34648894	chr9:34646637-34648894	0	+	34646704	34647866	789624	8	149,170,27,49,130,57,123,133,	0,451,903,1019,1194,1477,1696,2124,
#Partially deleted in new
chr9	34646644	34657113	chr9:34646644-34657113	3	+	34646704	34657113	789624	8	142,170,57,123,100,61,170,79,	0,444,1470,1689,8573,8960,10094,10390,
#Deleted in new
chr9	34646644	34647905	chr9:34646644-34647905	0	+	34646644	34646644	8553170	5	275,170,27,49,74,	0,444,896,1012,1187,
#Deleted in new
chr9	34646651	34648381	chr9:34646651-34648381	0	+	34646651	34646651	8553170	6	135,170,76,305,124,48,	0,437,840,1005,1396,1682,
#Deleted in new
chr9	34646657	34648828	chr9:34646657-34648828	0	+	34646657	34646657	8553170	7	129,170,214,130,80,123,67,	0,431,834,1174,1434,1676,2104,
#Partially deleted in new
chr9	34646662	34651035	chr9:34646662-34651035	3	+	34646704	34650449	0	11	124,170,76,49,130,57,123,133,84,155,667,	0,426,829,994,1169,1452,1671,2099,2335,2747,3706,
#Deleted in new
chr9	34646663	34648486	chr9:34646663-34648486	0	+	34646663	34646663	8553170	5	123,170,470,57,153,	0,425,828,1451,1670,
#Deleted in new
chr9	34646667	34648171	chr9:34646667-34648171	0	+	34646667	34646667	8553170	5	591,76,49,130,57,	0,824,989,1164,1447,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	34646674	34650116	chr9:34646674-34650116	0	+	34646674	34646674	8553170	5	112,170,57,561,1119,	0,414,1440,1659,2323,
#Deleted in new
chr9	34646674	34648375	chr9:34646674-34648375	0	+	34646704	34647834	789624	5	112,170,130,124,42,	0,414,1157,1373,1659,
#Deleted in new
chr9	34646674	34648389	chr9:34646674-34648389	0	+	34646674	34646674	8553170	4	112,170,631,56,	0,414,866,1659,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	34646674	34650282	chr9:34646674-34650282	0	+	34646674	34646674	8553170	7	112,170,76,305,57,561,1285,	0,414,817,982,1440,1659,2323,
#Deleted in new
chr9	34646676	34649022	chr9:34646676-34649022	0	+	34646704	34647495	789624	9	110,170,93,49,130,57,123,133,25,	0,412,798,980,1155,1438,1657,2085,2321,
#Deleted in new
chr9	34646678	34648826	chr9:34646678-34648826	0	+	34646678	34646678	8553170	5	108,479,305,57,493,	0,410,978,1436,1655,
#Partially deleted in new
chr9	34646680	34650549	chr9:34646680-34650549	0	+	34646680	34646680	8553170	8	106,873,57,123,133,84,155,181,	0,408,1434,1653,2081,2317,2729,3688,
#Deleted in new
chr9	34646695	34648637	chr9:34646695-34648637	0	+	34646695	34646695	8553170	4	91,170,124,304,	0,393,1352,1638,
#Deleted in new
chr9	34646772	34647794	chr9:34646772-34647794	0	+	34646772	34646772	8553170	3	95,170,303,	0,316,719,
#Deleted in new
chr9	34646781	34649130	chr9:34646781-34649130	0	+	34646781	34646781	8553170	8	86,170,76,49,130,57,123,369,	0,307,710,875,1050,1333,1552,1980,
#Deleted in new
chr9	34646788	34647849	chr9:34646788-34647849	0	+	34646788	34646788	8553170	3	79,170,309,	0,300,752,
#Deleted in new
chr9	34646805	34648512	chr9:34646805-34648512	0	+	34646805	34646805	8553170	6	114,170,214,130,57,179,	0,283,686,1026,1309,1528,
#Deleted in new
chr9	34646844	34648376	chr9:34646844-34648376	0	+	34646844	34646844	8553170	3	75,1083,43,	0,244,1489,
#Partially deleted in new
chr9	34646892	34650562	chr9:34646892-34650562	0	+	34646892	34646892	8553170	7	1069,57,123,146,84,155,194,	0,1222,1441,1869,2105,2517,3476,
#Deleted in new
chr9	34646899	34647762	chr9:34646899-34647762	0	+	34646899	34646899	8553170	3	359,93,106,	0,575,757,
#Deleted in new
chr9	34647122	34648894	chr9:34647122-34648894	0	+	34647122	34647430	789624	7	136,179,49,130,57,123,133,	0,266,534,709,992,1211,1639,
#Partially deleted in new
chr9	34648424	34650588	chr9:34648424-34650588	0	+	34648424	34648424	8553170	4	32,320,155,220,	0,337,985,1944,
#Partially deleted in new
chr9	34648921	34650583	chr9:34648921-34650583	0	+	34648921	34648921	8553170	2	643,215,	0,1447,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	34650701	34661881	chr9:34650701-34661881	3	+	34655217	34661498	789624	13	1356,100,61,170,115,33,167,164,142,120,97,83,400,	0,4516,4903,6037,6333,6601,6719,7818,9057,9572,9802,10152,10780,
#Partially deleted in new
chr9	34652161	34661887	chr9:34652161-34661887	0	+	34655217	34656803	789624	12	72,100,170,115,33,167,164,142,120,97,83,406,	0,3056,4577,4873,5141,5259,6358,7597,8112,8342,8692,9320,
#Partially deleted in new
chr9	34652191	34661887	chr9:34652191-34661887	1	+	34655217	34661498	789624	13	42,100,61,170,115,33,167,164,142,120,97,83,406,	0,3026,3413,4547,4843,5111,5229,6328,7567,8082,8312,8662,9290,
#Partially deleted in new
chr9	34652199	34658561	chr9:34652199-34658561	0	+	34655217	34658561	789624	6	34,100,115,33,167,42,	0,3018,4835,5103,5221,6320,
#Partially deleted in new
chr9	34653863	34657122	chr9:34653863-34657122	0	+	34655217	34657122	789624	5	156,100,61,170,88,	0,1354,1741,2875,3171,
#Partially deleted in new
chr9	34653934	34661892	chr9:34653934-34661892	1	+	34655217	34661498	789624	13	65,100,61,170,115,33,167,164,142,120,97,83,411,	0,1283,1670,2804,3100,3368,3486,4585,5824,6339,6569,6919,7547,
#Partially deleted in new
chr9	34653941	34656820	chr9:34653941-34656820	0	+	34653941	34653941	8553170	3	58,448,82,	0,1276,2797,
#Partially deleted in new
chr9	34653945	34661850	chr9:34653945-34661850	0	+	34655217	34657080	789624	12	54,100,61,115,33,167,164,142,120,97,83,369,	0,1272,1659,3089,3357,3475,4574,5813,6328,6558,6908,7536,
#Partially deleted in new
chr9	34655034	34657442	chr9:34655034-34657442	0	+	34655217	34657442	789624	7	36,100,61,170,115,33,22,	0,183,570,1704,2000,2268,2386,
#Partially deleted in new
chr9	34655083	34658683	chr9:34655083-34658683	0	+	34655217	34658683	789624	7	234,61,170,115,33,167,164,	0,521,1655,1951,2219,2337,3436,
#Deleted in new
chr9	34655130	34655937	chr9:34655130-34655937	0	+	34655130	34655130	8553170	2	187,333,	0,474,
#Partially deleted in new
chr9	34655217	34657517	chr9:34655217-34657517	0	+	34655217	34655217	8553170	6	100,61,170,84,22,97,	0,387,1521,1817,2096,2203,
#Partially deleted in new
chr9	34655217	34660819	chr9:34655217-34660819	1	+	34655217	34660604	789624	10	100,61,170,115,33,167,164,142,120,316,	0,387,1521,1817,2085,2203,3302,4541,5056,5286,
#Partially deleted in new
chr9	34655411	34656950	chr9:34655411-34656950	0	+	34655411	34655411	8553170	2	254,212,	0,1327,
#Deleted in new
chr9	34659885	34661655	chr9:34659885-34661655	0	+	34659885	34660804	789624	5	15,120,97,133,174,	0,388,618,918,1596,
#Deleted in new
chr9	34661879	34664048	chr9:34661879-34664048	0	-	34661879	34661879	8553170	3	200,133,546,	0,404,1623,
#Deleted in new
chr9	34661895	34662692	chr9:34661895-34662692	3	-	34661943	34662633	0	3	184,133,129,	0,388,668,
#Deleted in new
chr9	34661902	34666029	chr9:34661902-34666029	3	-	34661902	34661902	8553170	5	177,2907,60,68,52,	0,381,3411,3710,4075,
#Deleted in new
chr9	34664162	34666049	chr9:34664162-34666049	3	-	34665033	34665659	789624	3	1028,60,437,	0,1151,1450,
#Deleted in new
chr9	34665021	34665495	chr9:34665021-34665495	0	-	34665021	34665021	8553170	2	169,182,	0,292,
#Deleted in new
chr9	34665027	34666028	chr9:34665027-34666028	1	-	34665309	34665659	789624	3	346,68,51,	0,585,950,
#Deleted in new
chr9	34665027	34666112	chr9:34665027-34666112	1	-	34665309	34665659	789624	3	346,68,63,	0,585,1022,
#Deleted in new
chr9	34665031	34666028	chr9:34665031-34666028	1	-	34665033	34665659	789624	4	159,60,68,51,	0,282,581,946,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	34689566	34691277	chr9:34689566-34691277	3	-	34689818	34691139	0	4	273,94,133,187,	0,363,643,1524,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	34689571	34690238	chr9:34689571-34690238	0	-	34689571	34689571	8553170	2	452,29,	0,638,
#Deleted in new
chr9	34689856	34691204	chr9:34689856-34691204	1	-	34689890	34691139	789624	3	167,133,114,	0,353,1234,
#Deleted in new
chr9	34709004	34710124	chr9:34709004-34710124	3	-	34709393	34710066	0	4	423,183,121,125,	0,495,772,995,
#Deleted in new
chr9	34709274	34710069	chr9:34709274-34710069	1	-	34709495	34710066	789624	3	408,121,70,	0,502,725,
#Deleted in new
chr9	34723054	34729467	chr9:34723054-34729467	3	-	34723231	34729427	789624	4	3934,61,46,184,	0,4967,5554,6229,
#Deleted in new
chr9	34832294	34838493	chr9:34832294-34838493	7	-	34832294	34832294	16724991	4	3758,61,46,144,	0,4771,5359,6055,
#Deleted in new
chr9	34832644	34838586	chr9:34832644-34838586	5	-	34832644	34832644	16724991	4	3408,61,46,237,	0,4421,5009,5705,
#Deleted in new
chr9	34837441	34838497	chr9:34837441-34838497	4	-	34837441	34837441	16724991	2	258,148,	0,908,
#Partially deleted in new
chr9	34889063	34895778	chr9:34889063-34895778	1	-	34889363	34895722	789624	5	569,107,61,46,200,	0,3982,5377,5975,6515,
#Partially deleted in new
chr9	34889363	34895722	chr9:34889363-34895722	3	-	34889363	34895722	789624	5	272,494,61,46,144,	0,3295,5077,5675,6215,
#Partially deleted in new
chr9	34889560	34895761	chr9:34889560-34895761	1	-	34889602	34895722	789624	5	75,103,61,46,183,	0,3489,4880,5478,6018,
#Partially deleted in new
chr9	34917174	34918296	chr9:34917174-34918296	7	+	34917174	34917174	16724991	1	1122,	0,
#Partially deleted in new
chr9	34922183	34922921	chr9:34922183-34922921	7	-	34922183	34922183	16724991	1	738,	0,
#Partially deleted in new
chr9	34957607	34971517	chr9:34957607-34971517	0	+	34957607	34957607	8553170	2	90,223,	0,13687,
#Partially deleted in new
chr9	34958318	34978897	chr9:34958318-34978897	0	+	34958318	34958318	8553170	8	83,52,121,79,206,161,96,883,	0,12976,14092,17833,18216,18764,19227,19696,
#Partially deleted in new
chr9	34958323	34982544	chr9:34958323-34982544	3	+	34971298	34978111	0	8	78,382,186,79,206,161,96,4530,	0,12971,14022,17828,18211,18759,19222,19691,
#Deleted in new
chr9	34979687	34982544	chr9:34979687-34982544	0	+	34979687	34979687	8553170	2	565,103,	0,2754,
#Partially deleted in new
chr9	34985409	34989379	chr9:34985409-34989379	3	-	34985409	34985409	789624	2	528,221,	0,3749,
#Partially deleted in new
chr9	34989640	34998431	chr9:34989640-34998431	3	+	34989668	34997259	789624	5	191,145,245,602,1406,	0,1027,3559,6624,7385,
#Partially deleted in new
chr9	34989693	34998431	chr9:34989693-34998431	1	+	34993233	34997259	789624	4	138,245,602,1406,	0,3506,6571,7332,
#Partially deleted in new
chr9	34989744	34993332	chr9:34989744-34993332	0	+	34993233	34993332	789624	3	87,264,133,	0,603,3455,
#Partially deleted in new
chr9	34989744	34996670	chr9:34989744-34996670	0	+	34993233	34996670	789624	4	87,113,245,406,	0,754,3455,6520,
#Partially deleted in new
chr9	34989748	34997077	chr9:34989748-34997077	0	+	34993233	34996501	789624	4	83,245,472,52,	0,3451,6646,7277,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	34990221	34998428	chr9:34990221-34998428	0	+	34990221	34990221	8553170	3	3223,602,1403,	0,6043,6804,
#Partially deleted in new
chr9	34990249	34998433	chr9:34990249-34998433	1	+	34990630	34997259	789624	4	563,245,602,1408,	0,2950,6015,6776,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	34990265	34998900	chr9:34990265-34998900	1	+	34993233	34997259	789624	4	346,245,602,1875,	0,2934,5999,6760,
#Partially deleted in new
chr9	34991342	34996628	chr9:34991342-34996628	0	+	34991390	34996628	789624	3	74,245,364,	0,1857,4922,
#Partially deleted in new
chr9	34992871	34996519	chr9:34992871-34996519	0	+	34993233	34996519	789624	3	115,245,255,	0,328,3393,
#Deleted in new
chr9	35001341	35002994	chr9:35001341-35002994	7	-	35001341	35001341	16724991	1	1653,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	35001912	35003663	chr9:35001912-35003663	3	+	35001912	35001912	8553170	1	1751,	0,
#Deleted in new
chr9	35010702	35011285	chr9:35010702-35011285	7	+	35010702	35010702	16724991	1	583,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	35038624	35044326	chr9:35038624-35044326	3	-	35038624	35038624	8553170	1	5702,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	35041141	35043140	chr9:35041141-35043140	0	+	35043100	35043140	789624	2	299,280,	0,1719,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	35041149	35042889	chr9:35041149-35042889	0	+	35042470	35042889	789624	3	291,75,29,	0,1261,1711,
#Deleted in new
chr9	35042207	35045991	chr9:35042207-35045991	3	+	35042254	35045869	789624	2	278,3131,	0,653,
#Deleted in new
chr9	35042212	35043502	chr9:35042212-35043502	0	+	35042254	35043502	789624	2	168,642,	0,648,
#Deleted in new
chr9	35042471	35043337	chr9:35042471-35043337	0	+	35042471	35042500	789624	2	94,477,	0,389,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	35049270	35049563	chr9:35049270-35049563	3	+	35049270	35049270	8553170	1	293,	0,
#Partially deleted in new
chr9	35056063	35073249	chr9:35056063-35073249	3	-	35057116	35072353	0	17	1159,155,156,309,213,123,165,113,136,134,103,132,131,143,173,112,913,	0,1312,3000,3429,4249,4737,4951,5513,5939,6153,6914,8090,9187,10611,11827,12187,16273,
#Partially deleted in new
chr9	35056869	35072549	chr9:35056869-35072549	0	-	35056869	35056869	8553170	16	353,155,156,309,213,123,165,113,348,103,132,131,143,173,112,213,	0,506,2194,2623,3443,3931,4145,4707,5133,6108,7284,8381,9805,11021,11381,15467,
#Deleted in new
chr9	35057172	35057833	chr9:35057172-35057833	0	-	35057172	35057172	8553170	2	50,458,	0,203,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	35059060	35059892	chr9:35059060-35059892	0	-	35059060	35059060	8553170	2	159,400,	0,432,
#Partially deleted in new
chr9	35059747	35061630	chr9:35059747-35061630	0	-	35059747	35059747	8553170	4	54,611,165,54,	0,565,1267,1829,
#Partially deleted in new
chr9	35064245	35072627	chr9:35064245-35072627	0	-	35064245	35068057	789624	6	40,131,143,173,112,351,	0,1005,2429,3645,4005,8031,
#Partially deleted in new
chr9	35065345	35072014	chr9:35065345-35072014	0	-	35065345	35068057	789624	5	36,143,173,112,258,	0,1329,2545,2905,6411,
#Partially deleted in new
chr9	35073834	35079693	chr9:35073834-35079693	0	-	35077385	35079524	789624	13	382,124,156,47,290,67,152,147,131,136,132,91,253,	0,536,1092,1444,1630,2127,2597,2889,3136,3429,4770,5316,5606,
#Partially deleted in new
chr9	35073837	35080016	chr9:35073837-35080016	3	-	35074107	35079524	789624	14	379,124,156,47,290,67,152,147,131,136,203,132,91,576,	0,533,1089,1441,1627,2124,2594,2886,3133,3426,4303,4767,5313,5603,
#Deleted in new
chr9	35073838	35076565	chr9:35073838-35076565	0	-	35073838	35073838	8553170	3	378,62,44,	0,532,2683,
#Deleted in new
chr9	35074778	35075509	chr9:35074778-35075509	0	-	35074778	35074778	8553170	2	547,45,	0,686,
#Deleted in new
chr9	35076140	35076852	chr9:35076140-35076852	0	-	35076140	35076140	8553170	2	443,129,	0,583,
#Partially deleted in new
chr9	35077264	35079942	chr9:35077264-35079942	0	-	35077264	35079524	789624	6	135,203,132,91,95,212,	0,876,1340,1886,2176,2466,
#Deleted in new
chr9	35077997	35078646	chr9:35077997-35078646	0	-	35077997	35077997	8553170	2	346,42,	0,607,
#Deleted in new
chr9	35078601	35079669	chr9:35078601-35079669	0	-	35078601	35078601	8553170	2	135,519,	0,549,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	35088687	35096220	chr9:35088687-35096220	1	-	35089091	35095565	789624	13	534,71,215,207,52,225,180,160,124,144,512,98,66,	0,692,1378,1778,2552,3855,4342,4733,5213,5528,6367,7191,7467,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	35088688	35096601	chr9:35088688-35096601	3	-	35089091	35095565	789624	12	533,71,215,207,52,225,180,160,124,144,512,41,	0,691,1377,1777,2551,3854,4341,4732,5212,5527,6366,7872,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	35088689	35096550	chr9:35088689-35096550	0	-	35088689	35088689	8553170	4	4891,124,144,1496,	0,5211,5526,6365,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	35088690	35096548	chr9:35088690-35096548	1	-	35089091	35095565	789624	11	531,71,215,207,1528,180,160,124,144,512,394,	0,689,1375,1775,2549,4339,4730,5210,5525,6364,7464,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	35088692	35096576	chr9:35088692-35096576	0	-	35088692	35088692	8553170	5	1592,207,3120,512,16,	0,1773,2547,6362,7868,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	35088734	35090669	chr9:35088734-35090669	0	-	35088734	35088734	8553170	3	487,71,204,	0,645,1731,
#Partially deleted in new
chr9	35094211	35096254	chr9:35094211-35096254	0	-	35094211	35094211	8553170	3	148,512,100,	0,843,1943,
#Partially deleted in new
chr9	35095143	35096594	chr9:35095143-35096594	0	-	35095143	35095143	8553170	3	423,326,34,	0,1011,1417,
#Partially deleted in new
chr9	35096377	35098141	chr9:35096377-35098141	3	+	35096377	35096377	8553170	2	43,382,	0,1382,
#Deleted in new
chr9	35099775	35103195	chr9:35099775-35103195	1	-	35100034	35103094	789624	9	397,129,80,145,102,59,100,138,146,	0,822,1156,1359,1934,2128,2319,2910,3274,
#Deleted in new
chr9	35099775	35103195	chr9:35099775-35103195	1	-	35100034	35103094	789624	9	397,129,80,145,135,102,59,100,146,	0,822,1156,1359,1650,1934,2128,2319,3274,
#Deleted in new
chr9	35099890	35103157	chr9:35099890-35103157	3	-	35100034	35103094	789624	10	282,129,80,145,135,102,59,100,138,108,	0,707,1041,1244,1535,1819,2013,2204,2795,3159,
#Deleted in new
chr9	35099895	35101493	chr9:35099895-35101493	0	-	35100862	35101437	789624	4	277,414,145,68,	0,702,1239,1530,
#Deleted in new
chr9	35101780	35102364	chr9:35101780-35102364	0	-	35101780	35101780	8553170	3	31,59,270,	0,123,314,
#Partially deleted in new
chr9	35104111	35115850	chr9:35104111-35115850	1	-	35105220	35106870	789624	10	1263,176,69,159,106,59,188,222,144,180,	0,1570,1829,2140,2426,2721,3269,4016,4482,11559,
#Partially deleted in new
chr9	35104120	35115896	chr9:35104120-35115896	1	-	35105220	35108274	789624	9	1254,176,69,159,106,59,969,144,92,	0,1561,1820,2131,2417,2712,3260,4473,11684,
#Partially deleted in new
chr9	35104120	35112392	chr9:35104120-35112392	1	-	35105220	35108274	789624	9	1254,176,69,159,106,59,969,144,63,	0,1561,1820,2131,2417,2712,3260,4473,8209,
#Partially deleted in new
chr9	35104120	35111588	chr9:35104120-35111588	1	-	35105220	35108274	789624	9	1254,176,69,159,106,59,969,144,320,	0,1561,1820,2131,2417,2712,3260,4473,7148,
#Partially deleted in new
chr9	35104120	35116341	chr9:35104120-35116341	3	-	35105220	35108274	789624	9	1254,176,69,159,106,59,969,144,80,	0,1561,1820,2131,2417,2712,3260,4473,12141,
#Partially deleted in new
chr9	35104122	35111574	chr9:35104122-35111574	1	-	35105220	35108274	789624	8	1252,176,69,159,106,59,969,2981,	0,1559,1818,2129,2415,2710,3258,4471,
#Partially deleted in new
chr9	35104141	35111423	chr9:35104141-35111423	1	-	35105220	35108274	789624	9	1233,176,69,159,106,59,969,144,155,	0,1540,1799,2110,2396,2691,3239,4452,7127,
#Partially deleted in new
chr9	35108234	35115862	chr9:35108234-35115862	0	-	35108234	35108234	8553170	2	503,58,	0,7570,
#Partially deleted in new
chr9	35108344	35115862	chr9:35108344-35115862	0	-	35108344	35108344	8553170	2	393,192,	0,7326,
#Partially deleted in new
chr9	35147409	35149184	chr9:35147409-35149184	7	-	35147409	35147409	16724991	1	1775,	0,
#Partially deleted in new
chr9	35161991	35405334	chr9:35161991-35405334	1	+	35370348	35404033	789624	41	314,30,100,118,124,74,58,235,315,91,47,79,6,75,220,228,142,170,116,164,151,69,90,129,128,86,127,97,144,78,78,89,153,124,57,81,148,57,93,160,1587,	0,66023,69128,74477,75711,81299,97001,133704,148475,151907,204955,208326,209942,213135,214036,215476,216303,218478,219108,219564,220365,222254,223732,224173,227854,228637,234484,234849,235175,235643,236219,236562,236890,237169,237400,237657,238304,239959,241175,241448,241756,
#Partially deleted in new
chr9	35161991	35405334	chr9:35161991-35405334	1	+	35162283	35404033	789624	40	314,30,100,118,124,74,58,235,315,91,47,79,75,220,228,142,170,116,164,151,69,90,129,128,86,127,97,144,78,78,89,153,124,57,81,148,57,93,160,1587,	0,66023,69128,74477,75711,81299,97001,133704,148475,151907,204955,208326,213135,214036,215476,216303,218478,219108,219564,220365,222254,223732,224173,227854,228637,234484,234849,235175,235643,236219,236562,236890,237169,237400,237657,238304,239959,241175,241448,241756,
#Partially deleted in new
chr9	35162001	35404175	chr9:35162001-35404175	1	+	35162283	35404033	789624	41	304,30,100,118,124,74,58,36,235,315,91,47,79,75,220,228,142,170,116,164,151,69,90,129,128,86,127,97,144,78,78,89,153,124,57,81,148,57,93,160,428,	0,66013,69118,74467,75701,81289,96991,129067,133694,148465,151897,204945,208316,213125,214026,215466,216293,218468,219098,219554,220355,222244,223722,224163,227844,228627,234474,234839,235165,235633,236209,236552,236880,237159,237390,237647,238294,239949,241165,241438,241746,
#Partially deleted in new
chr9	35162061	35405338	chr9:35162061-35405338	3	+	35162283	35404033	789624	39	244,30,100,118,124,74,58,235,315,91,47,79,75,220,228,142,170,116,164,151,69,90,129,128,86,127,97,144,78,78,89,153,124,57,81,148,93,160,1591,	0,65953,69058,74407,75641,81229,96931,133634,148405,151837,204885,208256,213065,213966,215406,216233,218408,219038,219494,220295,222184,223662,224103,227784,228567,234414,234779,235105,235573,236149,236492,236820,237099,237330,237587,238234,241105,241378,241686,
#Partially deleted in new
chr9	35162061	35405338	chr9:35162061-35405338	1	+	35162283	35404033	789624	40	244,30,100,118,124,74,58,235,8247,315,91,47,79,75,220,228,142,170,116,164,151,69,90,129,128,86,127,97,144,78,78,89,153,124,57,81,148,93,160,1591,	0,65953,69058,74407,75641,81229,96931,133634,138104,148405,151837,204885,208256,213065,213966,215406,216233,218408,219038,219494,220295,222184,223662,224103,227784,228567,234414,234779,235105,235573,236149,236492,236820,237099,237330,237587,238234,241105,241378,241686,
#Partially deleted in new
chr9	35162103	35404054	chr9:35162103-35404054	1	+	35370348	35404033	789624	41	202,30,100,118,124,74,58,235,315,91,23,47,83,77,220,228,142,170,116,164,151,69,90,129,128,86,127,97,144,78,78,89,153,124,57,81,148,57,93,160,307,	0,65911,69016,74365,75599,81187,96889,133592,148363,151795,202441,204843,208214,213021,213924,215364,216191,218366,218996,219452,220253,222142,223620,224061,227742,228525,234372,234737,235063,235531,236107,236450,236778,237057,237288,237545,238192,239847,241063,241336,241644,
#Partially deleted in new
chr9	35162103	35404054	chr9:35162103-35404054	0	+	35162283	35376028	789624	42	202,30,100,118,124,74,58,235,315,91,23,47,79,6,75,220,228,142,170,116,164,151,69,90,129,128,86,127,97,144,78,78,89,153,124,57,81,148,57,93,160,307,	0,65911,69016,74365,75599,81187,96889,133592,148363,151795,202441,204843,208214,209830,213023,213924,215364,216191,218366,218996,219452,220253,222142,223620,224061,227742,228525,234372,234737,235063,235531,236107,236450,236778,237057,237288,237545,238192,239847,241063,241336,241644,
#Partially deleted in new
chr9	35227797	35243350	chr9:35227797-35243350	0	+	35227797	35227797	8553170	6	136,30,100,118,124,60,	0,217,3322,8671,9905,15493,
#Partially deleted in new
chr9	35341829	35405324	chr9:35341829-35405324	1	+	35351526	35404033	789624	33	515,2517,23,47,79,75,220,228,142,170,116,164,151,69,90,129,128,86,127,97,144,78,78,89,153,124,57,81,148,57,93,160,1577,	0,9464,22715,25117,28488,33297,34198,35638,36465,38640,39270,39726,40527,42416,43894,44335,48016,48799,54646,55011,55337,55805,56381,56724,57052,57331,57562,57819,58466,60121,61337,61610,61918,
#Partially deleted in new
chr9	35341829	35405244	chr9:35341829-35405244	0	+	35341829	35341829	8553170	30	515,47,79,75,220,228,142,170,116,164,151,69,90,129,128,86,127,97,144,78,78,89,153,124,57,81,148,93,160,1497,	0,25117,28488,33297,34198,35638,36465,38640,39270,39726,40527,42416,43894,44335,48016,48799,54646,55011,55337,55805,56381,56724,57052,57331,57562,57819,58466,61337,61610,61918,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	35360539	35362054	chr9:35360539-35362054	3	-	35360539	35360539	8553170	1	1515,	0,
#Deleted in new
chr9	35396537	35399169	chr9:35396537-35399169	0	+	35396537	35399169	789624	7	65,97,78,78,89,153,9,	0,303,1097,1673,2016,2344,2623,
#Partially deleted in new
chr9	35406754	35483035	chr9:35406754-35483035	7	+	35406754	35406754	16724991	18	73,77,59,114,100,62,73,71,83,159,89,181,85,44,84,375,131,1009,	0,2172,26952,31015,31974,33637,37630,38055,39650,40478,42714,62389,64265,66973,71487,73161,75044,75272,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	35406754	35451115	chr9:35406754-35451115	5	+	35406754	35406754	16724991	10	73,77,93,114,1725,73,71,83,159,1494,	0,2172,26952,31015,31974,37630,38055,39650,40478,42867,
#Partially deleted in new
chr9	35406754	35451115	chr9:35406754-35451115	5	+	35406754	35406754	16724991	11	73,81,59,114,100,62,73,71,83,159,1647,	0,2172,26952,31015,31974,33637,37630,38055,39650,40478,42714,
#Partially deleted in new
chr9	35406788	35480283	chr9:35406788-35480283	4	+	35406788	35406788	16724991	16	39,81,59,114,100,62,73,71,83,159,89,181,85,44,84,368,	0,2138,26918,30981,31940,33603,37596,38021,39616,40444,42680,62355,64231,66939,71453,73127,
#Partially deleted in new
chr9	35433706	35482210	chr9:35433706-35482210	5	+	35433706	35433706	16724991	17	59,114,100,62,73,71,83,159,89,181,209,44,84,375,139,131,184,	0,4063,5022,6685,10678,11103,12698,13526,15762,35437,37313,40021,44535,46209,46753,48092,48320,
#Deleted in new
chr9	35449747	35450352	chr9:35449747-35450352	7	+	35449747	35449747	16724991	1	605,	0,
#Partially deleted in new
chr9	35490126	35561892	chr9:35490126-35561892	2	+	35546521	35561382	789624	12	46,2106,642,186,141,77,175,106,47,823,138,712,	0,56303,64933,65825,66181,67787,68070,68335,69099,69902,70833,71054,
#Deleted in new
chr9	35507563	35507873	chr9:35507563-35507873	7	+	35507563	35507563	16724991	1	310,	0,
#Partially deleted in new
chr9	35538631	35561898	chr9:35538631-35561898	1	+	35546521	35561382	789624	12	477,2106,642,186,141,77,175,106,47,823,138,718,	0,7798,16428,17320,17676,19282,19565,19830,20594,21397,22328,22549,
#Partially deleted in new
chr9	35538979	35547236	chr9:35538979-35547236	0	+	35538979	35538979	8553170	2	129,807,	0,7450,
#Deleted in new
chr9	35561830	35563874	chr9:35561830-35563874	0	-	35561830	35561830	8553170	6	265,149,52,206,191,108,	0,549,818,1044,1335,1936,
#Deleted in new
chr9	35561831	35563899	chr9:35561831-35563899	1	-	35562006	35563828	789624	7	264,22,125,52,206,224,133,	0,548,572,817,1043,1334,1935,
#Deleted in new
chr9	35561834	35563047	chr9:35561834-35563047	0	-	35561834	35561834	8553170	4	261,195,52,173,	0,545,814,1040,
#Deleted in new
chr9	35561947	35563899	chr9:35561947-35563899	3	-	35562006	35563828	789624	6	148,195,52,206,224,133,	0,432,701,927,1218,1819,
#Deleted in new
chr9	35561948	35563899	chr9:35561948-35563899	0	-	35562399	35563828	789624	6	147,127,52,206,224,133,	0,431,700,926,1217,1818,
#Deleted in new
chr9	35562156	35562957	chr9:35562156-35562957	0	-	35562156	35562156	8553170	2	544,83,	0,718,
#Deleted in new
chr9	35562399	35563828	chr9:35562399-35563828	1	-	35562399	35563828	789624	5	107,52,206,224,62,	0,249,475,766,1367,
#Partially deleted in new
chr9	35592785	35592951	chr9:35592785-35592951	7	+	35592785	35592785	16724991	1	166,	0,
#Partially deleted in new
chr9	35605304	35610032	chr9:35605304-35610032	3	+	35605619	35609742	789624	11	121,365,122,49,147,83,91,84,90,115,1171,	0,169,679,932,1532,2022,2277,2623,2855,3090,3557,
#Partially deleted in new
chr9	35605369	35610032	chr9:35605369-35610032	1	+	35605619	35609742	789624	10	469,122,49,147,83,91,84,90,115,1171,	0,614,867,1467,1957,2212,2558,2790,3025,3492,
#Partially deleted in new
chr9	35605490	35610041	chr9:35605490-35610041	0	+	35605490	35605490	8553170	9	348,122,49,147,91,84,90,115,1180,	0,493,746,1346,2091,2437,2669,2904,3371,
#Deleted in new
chr9	35606971	35608282	chr9:35606971-35608282	0	+	35606971	35606971	8553170	4	438,91,84,123,	0,610,956,1188,
#Deleted in new
chr9	35607224	35608227	chr9:35607224-35608227	0	+	35607224	35607224	8553170	3	448,84,68,	0,703,935,
#Deleted in new
chr9	35607665	35608435	chr9:35607665-35608435	0	+	35607665	35607665	8553170	3	346,90,41,	0,494,729,
#Deleted in new
chr9	35608093	35608159	chr9:35608093-35608159	3	+	35608093	35608093	5263520	1	66,	0,
#Partially deleted in new
chr9	35609532	35619542	chr9:35609532-35619542	3	-	35610623	35618303	789624	10	768,152,116,146,336,90,72,108,216,31,	0,1069,2271,3315,6410,7067,7643,8481,8689,9979,
#Partially deleted in new
chr9	35609978	35618427	chr9:35609978-35618427	1	-	35610623	35618303	789624	9	322,152,116,146,336,90,72,108,206,	0,623,1825,2869,5964,6621,7197,8035,8243,
#Partially deleted in new
chr9	35609978	35618811	chr9:35609978-35618811	1	-	35610623	35618811	789624	10	322,152,116,146,336,90,72,108,12,70,	0,623,1825,2869,5964,6621,7197,8035,8529,8763,
#Partially deleted in new
chr9	35609984	35618413	chr9:35609984-35618413	0	-	35609984	35609984	8553170	8	316,152,116,146,747,72,108,142,	0,617,1819,2863,5958,7191,8029,8287,
#Partially deleted in new
chr9	35615942	35618353	chr9:35615942-35618353	0	-	35615942	35615942	8553170	5	444,90,72,108,82,	0,657,1233,2071,2329,
#Partially deleted in new
chr9	35615942	35618355	chr9:35615942-35618355	0	-	35615942	35615942	8553170	5	336,90,72,108,84,	0,657,1233,2071,2329,
#Partially deleted in new
chr9	35616169	35618370	chr9:35616169-35618370	1	-	35616591	35618303	789624	4	520,72,108,149,	0,1006,1844,2052,
#Partially deleted in new
chr9	35616565	35619534	chr9:35616565-35619534	0	-	35616565	35616565	8553170	4	682,108,124,23,	0,1448,2176,2946,
#Partially deleted in new
chr9	35616602	35646810	chr9:35616602-35646810	0	-	35616602	35616602	8553170	4	87,72,108,408,	0,573,1411,29800,
#Partially deleted in new
chr9	35616893	35618376	chr9:35616893-35618376	0	-	35616893	35616893	8553170	3	354,108,105,	0,1120,1378,
#Partially deleted in new
chr9	35616938	35618389	chr9:35616938-35618389	1	-	35617074	35618303	789624	3	309,108,168,	0,1075,1283,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	35642513	35643517	chr9:35642513-35643517	3	+	35642513	35642513	8553170	2	41,638,	0,366,
#Deleted in new
chr9	35646269	35647099	chr9:35646269-35647099	3	+	35646269	35646269	789624	2	164,410,	0,420,
#Deleted in new
chr9	35649294	35650940	chr9:35649294-35650940	3	-	35649847	35650853	789624	5	787,62,59,136,187,	0,889,1062,1207,1459,
#Deleted in new
chr9	35649302	35650950	chr9:35649302-35650950	1	-	35649847	35650853	789624	5	779,62,58,221,197,	0,881,1054,1114,1451,
#Deleted in new
chr9	35649367	35650470	chr9:35649367-35650470	0	-	35649367	35649367	8553170	3	714,62,114,	0,816,989,
#Deleted in new
chr9	35649426	35650910	chr9:35649426-35650910	0	-	35649426	35649426	8553170	4	655,62,59,157,	0,757,930,1327,
#Deleted in new
chr9	35657750	35658018	chr9:35657750-35658018	3	-	35657750	35657750	789624	1	268,	0,
#Deleted in new
chr9	35657753	35658017	chr9:35657753-35658017	3	-	35657753	35657753	8553170	1	264,	0,
#Partially deleted in new
chr9	35658289	35661499	chr9:35658289-35661499	1	+	35658379	35661187	789624	6	196,152,61,91,113,560,	0,286,2111,2267,2456,2650,
#Partially deleted in new
chr9	35658303	35661186	chr9:35658303-35661186	1	+	35658379	35660783	789624	5	182,152,61,91,413,	0,272,2097,2253,2470,
#Partially deleted in new
chr9	35658313	35661187	chr9:35658313-35661187	1	+	35658379	35660651	789624	4	172,152,61,631,	0,262,2087,2243,
#Partially deleted in new
chr9	35658313	35661511	chr9:35658313-35661511	3	+	35658379	35661187	789624	5	172,152,61,91,766,	0,262,2087,2243,2432,
#Partially deleted in new
chr9	35658316	35661177	chr9:35658316-35661177	1	+	35658379	35660823	789624	6	169,152,61,91,93,238,	0,259,2084,2240,2449,2623,
#Partially deleted in new
chr9	35658316	35661403	chr9:35658316-35661403	1	+	35658379	35660502	789624	3	169,152,1003,	0,259,2084,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	35658874	35675866	chr9:35658874-35675866	0	-	35661986	35669613	789624	12	299,874,290,89,230,129,71,119,121,95,125,2056,	0,1219,2838,3304,3637,4071,4447,5133,5497,5881,10709,14936,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	35658876	35665192	chr9:35658876-35665192	0	-	35662250	35665169	789624	8	297,1909,89,71,119,121,95,161,	0,1217,3302,4445,5131,5495,5879,6155,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	35659343	35665287	chr9:35659343-35665287	3	-	35661986	35665169	789624	9	2659,89,230,129,71,119,121,95,256,	0,2835,3168,3602,3978,4664,5028,5412,5688,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	35661518	35665187	chr9:35661518-35665187	0	-	35661518	35661518	8553170	7	484,89,230,71,119,121,156,	0,660,993,1803,2489,2853,3513,
#Deleted in new
chr9	35661837	35662644	chr9:35661837-35662644	0	-	35661837	35661837	8553170	3	165,49,133,	0,341,674,
#Deleted in new
chr9	35662966	35664828	chr9:35662966-35664828	0	-	35662966	35662966	8553170	4	426,119,121,73,	0,1041,1405,1789,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	35671775	35672044	chr9:35671775-35672044	3	+	35671775	35671775	8553170	1	269,	0,
#Partially deleted in new
chr9	35673855	35681159	chr9:35673855-35681159	3	+	35673959	35681025	0	11	507,30,171,143,93,67,158,145,27,82,195,	0,1682,1905,2208,2441,3934,5329,5998,6257,6897,7109,
#Partially deleted in new
chr9	35673917	35681155	chr9:35673917-35681155	1	+	35673959	35680764	789624	9	445,30,171,143,93,67,158,76,191,	0,1620,1843,2146,2379,3872,5267,6841,7047,
#Partially deleted in new
chr9	35676162	35681138	chr9:35676162-35681138	0	+	35676162	35676162	8553170	7	44,67,158,145,27,82,174,	0,1627,3022,3691,3950,4590,4802,
#Deleted in new
chr9	35680700	35681159	chr9:35680700-35681159	0	+	35680700	35680700	8553170	2	134,195,	0,264,
#Partially deleted in new
chr9	35681991	35690056	chr9:35681991-35690056	1	-	35682080	35689817	789624	9	172,70,63,76,71,118,134,126,353,	0,2254,2496,3072,3277,3442,3655,7154,7712,
#Deleted in new
chr9	35681991	35684802	chr9:35681991-35684802	0	-	35682707	35684802	789624	4	913,70,63,71,	0,2254,2496,2740,
#Partially deleted in new
chr9	35682013	35689913	chr9:35682013-35689913	1	-	35682080	35689817	789624	9	150,70,63,76,71,118,134,126,210,	0,2232,2474,2718,3255,3420,3633,7132,7690,
#Partially deleted in new
chr9	35682013	35689925	chr9:35682013-35689925	1	-	35682080	35689817	789624	9	150,70,63,76,71,118,134,126,222,	0,2232,2474,3050,3255,3420,3633,7132,7690,
#Partially deleted in new
chr9	35682268	35686425	chr9:35682268-35686425	0	-	35682268	35682268	8553170	8	973,70,63,76,71,118,134,75,	0,1977,2219,2463,3000,3165,3378,4082,
#Partially deleted in new
chr9	35682925	35690121	chr9:35682925-35690121	3	-	35683158	35689817	789624	9	316,70,63,76,71,118,134,126,418,	0,1320,1562,1806,2343,2508,2721,6220,6778,
#Partially deleted in new
chr9	35682931	35689925	chr9:35682931-35689925	1	-	35683158	35689817	789624	9	310,70,63,76,71,118,134,126,222,	0,1314,1556,1800,2337,2502,2715,6214,6772,
#Partially deleted in new
chr9	35682936	35689925	chr9:35682936-35689925	1	-	35683158	35689817	789624	9	305,70,63,76,71,118,134,126,222,	0,1309,1551,2127,2332,2497,2710,6209,6767,
#Deleted in new
chr9	35684040	35685466	chr9:35684040-35685466	0	-	35684222	35685466	789624	5	275,63,76,71,33,	0,447,691,1228,1393,
#Partially deleted in new
chr9	35684250	35689900	chr9:35684250-35689900	0	-	35684250	35684250	8553170	7	65,652,71,118,134,126,197,	0,237,1018,1183,1396,4895,5453,
#Deleted in new
chr9	35684750	35685543	chr9:35684750-35685543	0	-	35684750	35684750	8553170	2	589,110,	0,683,
#Partially deleted in new
chr9	35685144	35689925	chr9:35685144-35689925	0	-	35685144	35685144	8553170	4	195,118,38,222,	0,289,502,4559,
#Partially deleted in new
chr9	35696947	35732395	chr9:35696947-35732395	3	-	35697790	35725694	0	57	969,129,183,63,126,125,106,108,186,117,126,184,167,147,120,102,150,171,102,133,182,141,162,144,123,90,94,140,198,120,209,103,129,135,114,117,129,167,295,168,99,209,109,114,181,77,102,156,105,61,128,143,153,130,98,163,321,	0,1096,1375,1669,1860,2084,2408,3026,3243,6612,6827,7043,7384,7721,8603,8802,9014,9248,9502,9820,10124,10400,10783,11393,13613,13849,14041,14307,14647,15057,15887,16248,17005,17291,17626,17812,18111,19442,20198,20671,21864,22126,22571,22792,23091,23485,23864,24700,25171,25913,27004,27244,27624,27882,28276,28617,35127,
#Deleted in new
chr9	35698043	35699328	chr9:35698043-35699328	0	-	35698043	35698043	8553170	5	129,183,63,126,297,	0,279,573,764,988,
#Deleted in new
chr9	35703558	35707874	chr9:35703558-35707874	0	-	35703558	35703558	8553170	6	118,126,184,167,114,105,	0,216,432,773,1110,4211,
#Deleted in new
chr9	35703559	35704193	chr9:35703559-35704193	0	-	35703559	35703559	8553170	3	117,126,203,	0,215,431,
#Deleted in new
chr9	35703782	35704415	chr9:35703782-35704415	0	-	35703782	35703782	8553170	2	118,425,	0,208,
#Deleted in new
chr9	35704322	35706198	chr9:35704322-35706198	0	-	35704322	35704322	8553170	5	176,120,102,150,3,	0,1228,1427,1639,1873,
#Deleted in new
chr9	35707355	35707967	chr9:35707355-35707967	0	-	35707355	35707355	8553170	2	133,237,	0,375,
#Deleted in new
chr9	35710675	35710741	chr9:35710675-35710741	3	-	35710675	35710675	5263520	1	66,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	35723103	35732104	chr9:35723103-35732104	0	-	35723103	35723103	8553170	7	976,143,153,130,98,163,30,	0,1088,1468,1726,2120,2461,8971,
#Partially deleted in new
chr9	35732334	35737004	chr9:35732334-35737004	3	+	35732772	35736726	789624	9	567,148,68,90,107,69,85,85,613,	0,661,880,1061,2774,2971,3713,3892,4057,
#Partially deleted in new
chr9	35732597	35736860	chr9:35732597-35736860	0	+	35732597	35732597	8553170	8	304,287,90,107,69,85,85,469,	0,398,798,2511,2708,3450,3629,3794,
#Deleted in new
chr9	35732921	35732995	chr9:35732921-35732995	3	+	35732921	35732921	5263520	1	74,	0,
#Partially deleted in new
chr9	35736865	35749228	chr9:35736865-35749228	3	-	35737168	35748704	789624	17	582,192,116,143,107,152,108,105,173,126,154,103,240,219,116,92,883,	0,882,1171,1366,1660,1886,2136,2449,2762,3132,3343,3660,3959,4806,7431,7749,11480,
#Deleted in new
chr9	35736866	35738635	chr9:35736866-35738635	1	-	35737636	35738252	789624	2	1073,599,	0,1170,
#Partially deleted in new
chr9	35736866	35749218	chr9:35736866-35749218	1	-	35737475	35748704	789624	17	738,192,116,143,107,152,108,105,173,126,154,103,240,219,116,92,873,	0,881,1170,1365,1659,1885,2135,2448,2761,3131,3342,3659,3958,4805,7430,7748,11479,
#Partially deleted in new
chr9	35737911	35742029	chr9:35737911-35742029	0	-	35737911	35737911	8553170	13	28,116,143,107,152,108,105,173,126,154,103,240,358,	0,125,320,614,840,1090,1403,1716,2086,2297,2614,2913,3760,
#Deleted in new
chr9	35738052	35739041	chr9:35738052-35739041	0	-	35738052	35738052	8553170	3	580,152,40,	0,699,949,
#Deleted in new
chr9	35738366	35739110	chr9:35738366-35739110	0	-	35738366	35738366	8553170	2	537,109,	0,635,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	35741319	35744391	chr9:35741319-35744391	0	-	35741319	35741319	8553170	3	571,51,95,	0,1956,2977,
#Partially deleted in new
chr9	35744296	35748973	chr9:35744296-35748973	0	-	35744296	35744296	8553170	3	116,92,628,	0,318,4049,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	35749286	35758575	chr9:35749286-35758575	3	+	35749755	35752874	789624	9	122,135,137,84,150,147,128,190,5925,	0,450,956,1371,1553,1979,2340,2669,3364,
#Deleted in new
chr9	35749290	35754142	chr9:35749290-35754142	0	+	35749290	35749290	8553170	9	118,135,137,332,147,128,190,152,247,	0,446,952,1367,1975,2336,2665,3360,4605,
#Deleted in new
chr9	35752989	35754269	chr9:35752989-35754269	3	-	35753099	35754129	789624	3	291,109,270,	0,670,1010,
#Partially deleted in new
chr9	35752991	35756613	chr9:35752991-35756613	0	-	35752991	35752991	8553170	3	289,109,117,	0,668,3505,
#Deleted in new
chr9	35756711	35757940	chr9:35756711-35757940	3	-	35756711	35756711	8553170	2	483,213,	0,1016,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	35772162	35780598	chr9:35772162-35780598	1	+	35772162	35772162	8553170	2	214,332,	0,8104,
#Partially deleted in new
chr9	35772310	35790432	chr9:35772310-35790432	3	+	35772310	35772310	8553170	3	66,129,277,	0,14336,17845,
#Partially deleted in new
chr9	35792153	35809732	chr9:35792153-35809732	3	+	35792408	35809445	789624	22	922,206,114,136,95,133,85,121,75,78,105,72,160,156,169,147,124,69,175,99,92,353,	0,1744,7464,7868,8235,8555,8916,9489,9772,10052,10349,10578,13357,13676,13911,14238,14869,15176,16355,16601,17002,17226,
#Partially deleted in new
chr9	35792408	35809732	chr9:35792408-35809732	0	+	35792408	35792408	8553170	21	667,206,114,136,95,133,85,121,75,78,105,72,160,156,169,147,124,69,345,92,353,	0,1489,7209,7613,7980,8300,8661,9234,9517,9797,10094,10323,13102,13421,13656,13983,14614,14921,16100,16747,16971,
#Partially deleted in new
chr9	35805529	35808580	chr9:35805529-35808580	0	+	35805529	35808580	789624	7	141,102,169,147,124,69,72,	0,354,535,862,1493,1800,2979,
#Partially deleted in new
chr9	35806084	35809712	chr9:35806084-35809712	0	+	35806084	35809664	789624	5	149,147,124,62,61,	0,307,938,1245,3567,
#Partially deleted in new
chr9	35806532	35809719	chr9:35806532-35809719	0	+	35806532	35808784	789624	6	6,124,69,99,92,340,	0,490,797,2222,2623,2847,
#Deleted in new
chr9	35808044	35812272	chr9:35808044-35812272	3	-	35808172	35812147	789624	8	262,109,63,115,46,175,820,169,	0,1359,2202,2394,2592,2838,3137,4059,
#Deleted in new
chr9	35808044	35811074	chr9:35808044-35811074	0	-	35808044	35808044	8553170	5	262,63,115,46,192,	0,2202,2394,2592,2838,
#Deleted in new
chr9	35808044	35812155	chr9:35808044-35812155	0	-	35808044	35808044	8553170	6	262,115,46,175,78,52,	0,2394,2592,2838,3879,4059,
#Deleted in new
chr9	35808046	35812262	chr9:35808046-35812262	0	-	35810228	35812147	789624	7	260,906,115,46,175,820,159,	0,1357,2392,2590,2836,3135,4057,
#Deleted in new
chr9	35808130	35809877	chr9:35808130-35809877	0	-	35808130	35808130	8553170	2	176,474,	0,1273,
#Deleted in new
chr9	35808400	35809435	chr9:35808400-35809435	0	+	35808400	35808400	8553170	3	453,92,56,	0,755,979,
#Deleted in new
chr9	35809794	35812188	chr9:35809794-35812188	1	-	35809937	35812147	789624	7	338,45,115,46,175,820,79,	0,452,644,842,1088,1387,2315,
#Deleted in new
chr9	35809818	35812170	chr9:35809818-35812170	1	-	35809937	35812147	789624	7	314,63,115,46,175,820,67,	0,428,620,818,1064,1363,2285,
#Deleted in new
chr9	35809835	35812146	chr9:35809835-35812146	0	-	35809937	35812146	789624	7	297,63,115,46,175,820,37,	0,411,603,801,1047,1346,2274,
#Deleted in new
chr9	35809866	35811416	chr9:35809866-35811416	0	-	35809866	35809866	8553170	6	266,63,115,46,175,235,	0,380,572,770,1016,1315,
#Deleted in new
chr9	35810003	35812173	chr9:35810003-35812173	0	-	35810969	35812147	789624	6	129,63,244,175,78,70,	0,243,435,879,1920,2100,
#Deleted in new
chr9	35810207	35812149	chr9:35810207-35812149	0	-	35811055	35812147	789624	4	475,175,245,46,	0,675,1549,1896,
#Deleted in new
chr9	35810255	35812175	chr9:35810255-35812175	0	-	35810969	35812147	789624	4	427,175,78,72,	0,627,1668,1848,
#Deleted in new
chr9	35812959	35815021	chr9:35812959-35815021	3	-	35813053	35814979	0	5	186,73,105,141,123,	0,306,485,684,1939,
#Deleted in new
chr9	35812959	35814992	chr9:35812959-35814992	0	-	35812959	35812959	8553170	5	186,73,75,141,94,	0,306,485,684,1939,
#Deleted in new
chr9	35812959	35815354	chr9:35812959-35815354	0	-	35812959	35812959	8553170	5	186,73,105,141,348,	0,306,485,684,2047,
#Deleted in new
chr9	35812959	35815352	chr9:35812959-35815352	0	-	35812959	35812959	8553170	3	186,73,1908,	0,306,485,
#Deleted in new
chr9	35812959	35813770	chr9:35812959-35813770	0	-	35812959	35812959	8553170	2	590,127,	0,684,
#Partially deleted in new
chr9	35812959	35828732	chr9:35812959-35828732	3	-	35818468	35819933	8553170	10	186,73,105,141,593,120,20,111,191,270,	0,306,485,684,4954,5930,6415,6930,8478,15503,
#Deleted in new
chr9	35812960	35813694	chr9:35812960-35813694	0	-	35812960	35812960	8553170	4	185,102,105,51,	0,305,484,683,
#Deleted in new
chr9	35812973	35815021	chr9:35812973-35815021	0	-	35812973	35812973	8553170	4	365,105,141,123,	0,471,670,1925,
#Partially deleted in new
chr9	35816390	35828747	chr9:35816390-35828747	2	-	35819910	35826161	789624	8	2116,120,198,111,191,144,598,285,	0,2499,2806,3499,5047,8839,9173,12072,
#Partially deleted in new
chr9	35817016	35828732	chr9:35817016-35828732	1	-	35818468	35826161	789624	7	1490,120,198,111,144,598,270,	0,1873,2180,2873,8213,8547,11446,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	35819343	35828579	chr9:35819343-35828579	0	-	35819343	35826161	789624	6	51,111,144,598,146,117,	0,546,5886,6220,7448,9119,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	35825890	35828732	chr9:35825890-35828732	0	-	35825890	35826161	789624	3	271,178,270,	0,901,2572,
#Partially deleted in new
chr9	35829227	35847235	chr9:35829227-35847235	1	+	35842438	35847193	789624	11	164,79,190,208,134,269,326,94,124,143,419,	0,649,5233,5783,11906,12298,13164,16747,17030,17241,17589,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr9	35829231	35865518	chr9:35829231-35865518	3	+	35842438	35853840	789624	14	88,79,190,208,134,269,326,94,124,143,179,147,117,12014,	0,645,5229,5779,11902,12294,13160,16743,17026,17237,17585,23595,23909,24273,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr9	35829231	35854847	chr9:35829231-35854847	1	+	35842438	35853840	789624	14	88,79,190,208,134,269,326,94,124,143,179,147,117,1343,	0,645,5229,5779,11902,12294,13160,16743,17026,17237,17585,23595,23909,24273,
#Partially deleted in new
chr9	35829271	35842467	chr9:35829271-35842467	0	+	35829271	35829271	8553170	5	48,154,134,269,76,	0,6016,11862,12254,13120,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	35829447	35856225	chr9:35829447-35856225	1	+	35829447	35853840	789624	13	508,190,208,134,269,326,94,124,143,179,147,117,2721,	0,5013,5563,11686,12078,12944,16527,16810,17021,17369,23379,23693,24057,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	35829497	35854846	chr9:35829497-35854846	1	+	35842438	35853840	789624	13	458,190,208,134,269,326,94,124,143,179,147,117,1342,	0,4963,5513,11636,12028,12894,16477,16760,16971,17319,23329,23643,24007,
#Partially deleted in new
chr9	35829515	35846380	chr9:35829515-35846380	0	+	35829515	35829515	8553170	5	440,188,154,94,123,	0,4945,5772,16459,16742,
#Partially deleted in new
chr9	35829776	35846271	chr9:35829776-35846271	0	+	35829776	35829776	8553170	4	179,134,326,297,	0,11357,12615,16198,
#Deleted in new
chr9	35859054	35859980	chr9:35859054-35859980	7	-	35859054	35859054	16724991	1	926,	0,
#Deleted in new
chr9	35869262	35870601	chr9:35869262-35870601	3	-	35869462	35870401	789624	1	1339,	0,
#Partially deleted in new
chr9	35874809	35875194	chr9:35874809-35875194	7	-	35874809	35874809	16724991	1	385,	0,
#Deleted in new
chr9	35906191	35907141	chr9:35906191-35907141	3	+	35906287	35906635	789624	1	950,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	35909482	35911686	chr9:35909482-35911686	3	+	35910463	35910691	789624	2	82,1530,	0,674,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	35910075	35911613	chr9:35910075-35911613	1	+	35910463	35910691	789624	1	1538,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	35915460	35937152	chr9:35915460-35937152	0	+	35915460	35915460	8553170	4	552,78,99,136,	0,14596,20246,21556,
#Deleted in new
chr9	35943209	35943934	chr9:35943209-35943934	7	-	35943209	35943209	16724991	1	725,	0,
#Deleted in new
chr9	35957107	35958154	chr9:35957107-35958154	3	-	35957138	35958098	789624	1	1047,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	35962194	36014623	chr9:35962194-36014623	7	+	35962194	35962194	16724991	3	185,87,1587,	0,453,50842,
#Deleted in new
chr9	35971343	35972318	chr9:35971343-35972318	7	-	35971343	35971343	16724991	1	975,	0,
#Deleted in new
chr9	35991335	35992285	chr9:35991335-35992285	7	-	35991335	35991335	16724991	1	950,	0,
#Deleted in new
chr9	36002908	36003867	chr9:36002908-36003867	3	-	36002908	36003867	8553170	1	959,	0,
#Deleted in new
chr9	36013183	36014133	chr9:36013183-36014133	5	+	36013183	36013183	16724991	1	950,	0,
#Deleted in new
chr9	36021691	36022113	chr9:36021691-36022113	7	+	36021691	36021691	16724991	1	422,	0,
#Partially deleted in new
chr9	36036432	36124451	chr9:36036432-36124451	3	+	36036998	36123045	789624	21	666,59,75,37,86,48,34,198,268,180,213,137,141,189,123,172,193,211,74,156,1628,	0,15832,22394,23686,27362,29144,44172,46932,51261,54731,63898,65661,68710,71543,73524,75872,80552,82324,84230,85100,86391,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	36036923	36086181	chr9:36036923-36086181	0	+	36036923	36036923	8553170	11	175,59,34,75,37,86,48,102,34,198,280,	0,15341,20056,21903,23195,26871,28653,29845,43681,46441,48978,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	36036939	36086195	chr9:36036939-36086195	0	+	36036939	36036939	8553170	9	159,59,75,37,86,48,34,198,1021,	0,15325,21887,23179,26855,28637,43665,46425,48235,
#Deleted in new
chr9	36072685	36072762	chr9:36072685-36072762	3	+	36072685	36072685	8553170	1	77,	0,
#Partially deleted in new
chr9	36136535	36163913	chr9:36136535-36163913	3	+	36136778	36162428	789624	3	256,109,1552,	0,11250,25826,
#Partially deleted in new
chr9	36136741	36162910	chr9:36136741-36162910	1	+	36136778	36162522	789624	4	50,109,104,549,	0,11044,11805,25620,
#Partially deleted in new
chr9	36136744	36163913	chr9:36136744-36163913	1	+	36136778	36162522	0	5	47,109,104,78,1552,	0,11041,11802,14127,25617,
#Partially deleted in new
chr9	36136784	36163913	chr9:36136784-36163913	1	+	36136819	36162522	789624	2	93,1552,	0,25577,
#Deleted in new
chr9	36169393	36171334	chr9:36169393-36171334	3	+	36169502	36171269	789624	1	1941,	0,
#Partially deleted in new
chr9	36190855	36212061	chr9:36190855-36212061	1	+	36191056	36211774	789624	7	418,38,118,112,54,37,458,	0,6695,8123,13212,18411,19769,20748,
#Partially deleted in new
chr9	36190855	36212061	chr9:36190855-36212061	1	+	36191056	36211774	789624	6	418,38,118,112,37,458,	0,6695,8123,13212,19769,20748,
#Partially deleted in new
chr9	36190855	36212061	chr9:36190855-36212061	1	+	36191056	36211774	789624	3	418,112,459,	0,13212,20747,
#Partially deleted in new
chr9	36190922	36212056	chr9:36190922-36212056	1	+	36191056	36211774	789624	5	351,38,118,112,454,	0,6628,8056,13145,20680,
#Partially deleted in new
chr9	36190931	36212058	chr9:36190931-36212058	1	+	36191056	36211774	789624	6	342,38,118,112,36,456,	0,6619,8047,13136,19693,20671,
#Partially deleted in new
chr9	36190936	36212059	chr9:36190936-36212059	3	+	36191056	36211774	789624	7	337,38,118,112,54,36,457,	0,6614,8042,13131,18330,19688,20666,
#Partially deleted in new
chr9	36190962	36212059	chr9:36190962-36212059	1	+	36191056	36211774	789624	6	311,38,118,112,54,457,	0,6588,8016,13105,18304,20640,
#Partially deleted in new
chr9	36190962	36211784	chr9:36190962-36211784	1	+	36191056	36211774	789624	5	311,112,54,36,182,	0,13105,18304,19662,20640,
#Partially deleted in new
chr9	36191164	36212057	chr9:36191164-36212057	0	+	36191164	36204115	789624	4	109,38,112,455,	0,6386,12903,20438,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	36214440	36277056	chr9:36214440-36277056	1	-	36217364	36276944	0	12	3160,117,183,222,130,211,88,213,153,452,206,163,	0,3742,5397,8336,8932,12807,14580,19479,22391,31590,34751,62453,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	36214440	36258448	chr9:36214440-36258448	3	-	36217364	36249355	0	12	3160,117,183,222,130,211,88,213,153,452,206,128,	0,3742,5397,8336,8932,12807,14580,19479,22391,31590,34751,43880,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	36214443	36249396	chr9:36214443-36249396	1	-	36217364	36249355	0	12	848,835,117,183,222,130,211,88,213,153,452,205,	0,2322,3739,5394,8333,8929,12804,14577,19476,22388,31587,34748,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	36216942	36277042	chr9:36216942-36277042	1	-	36217364	36277042	0	11	658,117,183,222,130,211,88,213,153,452,149,	0,1240,2895,5834,6430,10305,12078,16977,19889,29088,59951,
#Partially deleted in new
chr9	36217151	36258445	chr9:36217151-36258445	1	-	36217364	36246469	0	10	449,117,183,222,130,211,88,213,452,125,	0,1031,2686,5625,6221,10096,11869,16768,28879,41169,
#Partially deleted in new
chr9	36217188	36258329	chr9:36217188-36258329	1	-	36217364	36249355	0	11	412,117,183,130,211,88,213,153,452,206,9,	0,994,2649,6184,10059,11832,16731,19643,28842,32003,41132,
#Partially deleted in new
chr9	36217189	36258499	chr9:36217189-36258499	1	-	36217364	36249355	0	12	411,117,183,222,130,211,88,213,153,452,206,179,	0,993,2648,5587,6183,10058,11831,16730,19642,28841,32002,41131,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	36264972	36276976	chr9:36264972-36276976	0	-	36264972	36264972	8553170	2	444,83,	0,11921,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	36267782	36267922	chr9:36267782-36267922	3	+	36267782	36267782	8553170	1	140,	0,
#Partially deleted in new
chr9	36303498	36304924	chr9:36303498-36304924	7	-	36303498	36303498	16724991	2	552,70,	0,1356,
#Partially deleted in new
chr9	36336395	36400216	chr9:36336395-36400216	3	-	36339751	36400108	0	12	3419,100,122,85,107,162,171,168,214,194,150,120,	0,5929,8436,14719,16346,16774,19907,21379,33323,39538,54071,63701,
#Partially deleted in new
chr9	36336395	36400299	chr9:36336395-36400299	1	-	36339751	36400108	0	11	3419,100,122,85,107,162,171,168,214,194,203,	0,5929,8436,14719,16346,16774,19907,21379,33323,39538,63701,
#Partially deleted in new
chr9	36336403	36400923	chr9:36336403-36400923	1	-	36339751	36376040	0	11	3411,100,122,85,107,162,171,168,214,194,370,	0,5921,8428,14711,16338,16766,19899,21371,33315,39530,64150,
#Partially deleted in new
chr9	36336403	36400923	chr9:36336403-36400923	1	-	36339751	36376040	0	12	3411,100,122,85,107,162,171,168,214,194,150,370,	0,5921,8428,14711,16338,16766,19899,21371,33315,39530,54063,64150,
#Partially deleted in new
chr9	36336403	36401198	chr9:36336403-36401198	1	-	36339751	36376040	0	12	3411,100,122,85,107,162,171,168,214,194,150,101,	0,5921,8428,14711,16338,16766,19899,21371,33315,39530,54063,64694,
#Partially deleted in new
chr9	36336403	36400299	chr9:36336403-36400299	1	-	36339751	36375963	0	13	3411,100,122,85,107,162,171,168,214,98,194,150,203,	0,5921,8428,14711,16338,16766,19899,21371,33315,36092,39530,54063,63693,
#Partially deleted in new
chr9	36339580	36400872	chr9:36339580-36400872	1	-	36339751	36375963	0	12	234,100,122,85,107,162,171,168,214,98,194,319,	0,2744,5251,11534,13161,13589,16722,18194,30138,32915,36353,60973,
#Partially deleted in new
chr9	36356339	36401196	chr9:36356339-36401196	0	-	36356339	36356339	8553170	6	134,168,214,194,150,99,	0,1435,13379,19594,34127,44758,
#Partially deleted in new
chr9	36369722	36401198	chr9:36369722-36401198	0	-	36369722	36369722	8553170	3	210,194,263,	0,6211,31213,
#Partially deleted in new
chr9	36376007	36487548	chr9:36376007-36487548	0	-	36376007	36376007	8553170	4	120,150,71,241,	0,14459,48605,111300,
#Partially deleted in new
chr9	36572861	36677682	chr9:36572861-36677682	3	+	36581681	36677337	0	18	146,96,86,117,144,69,93,99,69,99,87,132,123,232,97,169,104,523,	0,8782,10765,16674,21766,24360,26532,34713,57437,60240,70135,78884,84379,92488,96448,98136,101972,104298,
#Partially deleted in new
chr9	36572861	36677683	chr9:36572861-36677683	1	+	36581691	36677337	0	16	146,96,144,69,93,99,69,99,87,132,123,232,97,169,104,524,	0,8782,21766,24360,26532,34713,57437,60240,70135,78884,84379,92488,96448,98136,101972,104298,
#Partially deleted in new
chr9	36572861	36677683	chr9:36572861-36677683	1	+	36581681	36677337	0	17	146,96,86,117,69,93,99,69,99,87,132,123,232,97,169,104,524,	0,8782,10765,16674,24360,26532,34713,57437,60240,70135,78884,84379,92488,96448,98136,101972,104298,
#Partially deleted in new
chr9	36572861	36677683	chr9:36572861-36677683	1	+	36581681	36677337	0	17	146,96,86,117,144,69,93,99,69,99,87,132,232,97,169,104,524,	0,8782,10765,16674,21766,24360,26532,34713,57437,60240,70135,78884,92488,96448,98136,101972,104298,
#Partially deleted in new
chr9	36572861	36677683	chr9:36572861-36677683	1	+	36581691	36677337	0	17	146,96,117,144,69,93,99,69,99,87,132,123,232,97,169,104,524,	0,8782,16674,21766,24360,26532,34713,57437,60240,70135,78884,84379,92488,96448,98136,101972,104298,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr9	36572862	36677429	chr9:36572862-36677429	0	+	36589640	36607636	789624	18	145,96,117,144,69,93,118,99,69,99,87,132,123,232,97,169,104,270,	0,8781,16673,21765,24359,26531,33943,34712,57436,60239,70134,78883,84378,92487,96447,98135,101971,104297,
#Partially deleted in new
chr9	36572894	36677681	chr9:36572894-36677681	1	+	36589640	36677337	0	15	113,117,69,93,99,69,99,87,132,123,232,97,169,104,522,	0,16641,24327,26499,34680,57404,60207,70102,78851,84346,92455,96415,98103,101939,104265,
#Partially deleted in new
chr9	36572896	36607622	chr9:36572896-36607622	0	+	36572896	36572896	8553170	6	111,96,86,117,93,48,	0,8747,10730,16639,26497,34678,
#Partially deleted in new
chr9	36572896	36633155	chr9:36572896-36633155	0	+	36581681	36633155	789624	9	111,96,86,117,69,93,99,69,54,	0,8747,10730,16639,24325,26497,34678,57402,60205,
#Partially deleted in new
chr9	36572896	36677681	chr9:36572896-36677681	1	+	36581681	36677337	0	16	111,96,86,117,93,99,69,99,87,132,123,232,97,169,104,522,	0,8747,10730,16639,26497,34678,57402,60205,70100,78849,84344,92453,96413,98101,101937,104263,
#Partially deleted in new
chr9	36572923	36630367	chr9:36572923-36630367	0	+	36572923	36572923	8553170	8	275,96,117,144,69,93,99,69,	0,8720,16612,21704,24298,26470,34651,57375,
#Partially deleted in new
chr9	36572929	36677417	chr9:36572929-36677417	0	+	36589640	36607650	789624	16	78,117,144,69,93,95,69,99,87,132,123,232,97,169,104,258,	0,16606,21698,24292,26464,34649,57369,60172,70067,78816,84311,92420,96380,98068,101904,104230,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	36630006	36633200	chr9:36630006-36633200	0	+	36630006	36630006	8553170	2	361,99,	0,3095,
#Deleted in new
chr9	36823538	36823599	chr9:36823538-36823599	3	-	36823538	36823538	5263520	1	61,	0,
#Partially deleted in new
chr9	36833274	37034185	chr9:36833274-37034185	3	-	36840559	37034031	0	10	7362,87,102,130,176,129,65,198,166,200,	0,13568,48729,90080,133274,169373,173198,181722,187361,200711,
#Partially deleted in new
chr9	36840171	37034041	chr9:36840171-37034041	0	-	36882018	37034031	0	9	465,87,102,176,129,65,198,166,56,	0,6671,41832,126377,162476,166301,174825,180464,193814,
#Partially deleted in new
chr9	36840171	37034041	chr9:36840171-37034041	1	-	36840559	37034031	0	9	465,87,130,176,129,65,198,166,56,	0,6671,83183,126377,162476,166301,174825,180464,193814,
#Partially deleted in new
chr9	36840171	37034041	chr9:36840171-37034041	1	-	36840559	37034031	0	9	465,102,130,176,129,65,198,166,56,	0,41832,83183,126377,162476,166301,174825,180464,193814,
#Partially deleted in new
chr9	36840171	37034041	chr9:36840171-37034041	1	-	36840528	37034031	789624	7	465,176,129,65,198,166,56,	0,126377,162476,166301,174825,180464,193814,
#Partially deleted in new
chr9	36840171	37034041	chr9:36840171-37034041	1	-	36840528	37034031	789624	8	465,87,176,129,65,198,166,56,	0,6671,126377,162476,166301,174825,180464,193814,
#Partially deleted in new
chr9	36840550	37034031	chr9:36840550-37034031	1	-	36840559	37034031	0	8	86,130,176,129,65,198,166,46,	0,82804,125998,162097,165922,174446,180085,193435,
#Partially deleted in new
chr9	36840550	37034031	chr9:36840550-37034031	1	-	36840559	37034031	0	9	86,87,102,130,176,65,198,166,46,	0,6292,41453,82804,125998,165922,174446,180085,193435,
#Partially deleted in new
chr9	36840550	37034031	chr9:36840550-37034031	1	-	36840559	37034031	0	8	86,87,130,176,129,65,166,46,	0,6292,82804,125998,162097,165922,180085,193435,
#Partially deleted in new
chr9	36840550	37034031	chr9:36840550-37034031	1	-	36840559	37034031	0	8	86,102,130,176,65,198,166,46,	0,41453,82804,125998,165922,174446,180085,193435,
#Partially deleted in new
chr9	36840550	37034031	chr9:36840550-37034031	1	-	36840559	37015082	789624	9	86,87,102,130,176,129,65,198,46,	0,6292,41453,82804,125998,162097,165922,174446,193435,
#Partially deleted in new
chr9	36840550	37034031	chr9:36840550-37034031	1	-	36840559	37015082	789624	7	86,130,176,129,65,198,46,	0,82804,125998,162097,165922,174446,193435,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	36840550	37034031	chr9:36840550-37034031	0	-	36882018	37034031	0	10	86,87,102,57,176,129,65,198,166,46,	0,6292,41453,90337,125998,162097,165922,174446,180085,193435,
#Partially deleted in new
chr9	36840557	37002752	chr9:36840557-37002752	0	-	36840559	37002752	789624	2	79,105,	0,162090,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	36840557	37002675	chr9:36840557-37002675	0	-	36840559	37002675	789624	7	79,87,102,130,57,176,28,	0,6285,41446,82797,90330,125991,162090,
#Deleted in new
chr9	36864253	36864308	chr9:36864253-36864308	3	-	36864253	36864253	5263520	1	55,	0,
#Deleted in new
chr9	36893461	36893531	chr9:36893461-36893531	3	-	36893461	36893461	5263520	1	70,	0,
#Partially deleted in new
chr9	36922693	36966589	chr9:36922693-36966589	0	-	36922693	36922693	8553170	2	791,41,	0,43855,
#Partially deleted in new
chr9	37002696	37008040	chr9:37002696-37008040	3	+	37002696	37002696	8553170	2	148,591,	0,4753,
#Deleted in new
chr9	37046834	37047237	chr9:37046834-37047237	7	+	37046834	37046834	16724991	1	403,	0,
#Partially deleted in new
chr9	37073530	37075792	chr9:37073530-37075792	3	-	37073530	37073530	8553170	2	337,610,	0,1652,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	37078812	37079776	chr9:37078812-37079776	3	-	37078812	37078812	8553170	1	964,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	37079856	37090507	chr9:37079856-37090507	1	+	37079856	37079856	5263520	2	680,3840,	0,6811,
#Partially deleted in new
chr9	37079907	37087176	chr9:37079907-37087176	0	+	37079907	37079907	8553170	2	127,509,	0,6760,
#Partially deleted in new
chr9	37079928	37081049	chr9:37079928-37081049	0	+	37079928	37079928	8553170	2	110,191,	0,930,
#Partially deleted in new
chr9	37079934	37086874	chr9:37079934-37086874	0	+	37079934	37079934	8553170	2	104,207,	0,6733,
#Partially deleted in new
chr9	37079936	37087152	chr9:37079936-37087152	0	+	37079936	37079936	8553170	2	94,485,	0,6731,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	37080012	37087007	chr9:37080012-37087007	3	+	37080012	37080012	8553170	3	524,94,340,	0,4186,6655,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	37084989	37087824	chr9:37084989-37087824	0	+	37084989	37084989	8553170	1	2835,	0,
#Partially deleted in new
chr9	37112547	37115490	chr9:37112547-37115490	3	-	37112547	37112547	8553170	2	708,606,	0,2337,
#Partially deleted in new
chr9	37120538	37358149	chr9:37120538-37358149	3	+	37126332	37357268	789624	9	85,631,44,126,171,36,96,115,1315,	0,5773,181649,183649,185005,207260,228818,234171,236296,
#Partially deleted in new
chr9	37120597	37358146	chr9:37120597-37358146	1	+	37126332	37357268	789624	9	297,631,44,126,171,36,96,115,1312,	0,5714,181590,183590,184946,207201,228759,234112,236237,
#Partially deleted in new
chr9	37120604	37187054	chr9:37120604-37187054	1	+	37126335	37186722	789624	4	172,73,631,343,	0,995,5707,66107,
#Partially deleted in new
chr9	37120635	37358149	chr9:37120635-37358149	0	+	37120635	37120635	8553170	9	259,631,44,126,171,36,96,115,1315,	0,5676,181552,183552,184908,207163,228721,234074,236199,
#Partially deleted in new
chr9	37144931	37356980	chr9:37144931-37356980	0	+	37144931	37144931	8553170	9	66,84,44,126,171,36,96,115,146,	0,2430,157256,159256,160612,182867,204425,209778,211903,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	37160136	37160237	chr9:37160136-37160237	3	+	37160136	37160136	8553170	1	101,	0,
#Deleted in new
chr9	37205111	37205368	chr9:37205111-37205368	7	-	37205111	37205111	16724991	1	257,	0,
#Partially deleted in new
chr9	37284162	37354802	chr9:37284162-37354802	0	+	37284162	37284162	8553170	7	166,44,126,171,36,96,93,	0,18025,20025,21381,43636,65194,70547,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	37322258	37322371	chr9:37322258-37322371	3	+	37322258	37322258	8553170	1	113,	0,
#Partially deleted in new
chr9	37326033	37357159	chr9:37326033-37357159	0	+	37326033	37326033	8553170	5	127,36,96,115,325,	0,1765,23323,28676,30801,
#Partially deleted in new
chr9	37326923	37357390	chr9:37326923-37357390	0	+	37326923	37326923	8553170	5	100,36,96,115,556,	0,875,22433,27786,29911,
#Partially deleted in new
chr9	37327319	37357165	chr9:37327319-37357165	0	+	37327319	37327319	8553170	5	143,36,96,115,331,	0,479,22037,27390,29515,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	37333856	37333957	chr9:37333856-37333957	3	-	37333856	37333856	8553170	1	101,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	37383177	37384434	chr9:37383177-37384434	3	-	37383177	37383177	8553170	2	114,129,	0,1128,
#Partially deleted in new
chr9	37422665	37436990	chr9:37422665-37436990	3	+	37422750	37436782	0	9	168,131,73,117,89,105,136,131,330,	0,2179,3256,3872,5818,7066,7845,9342,13995,
#Partially deleted in new
chr9	37422665	37429158	chr9:37422665-37429158	0	+	37422665	37422665	8553170	5	140,131,73,117,675,	0,2179,3256,3872,5818,
#Partially deleted in new
chr9	37422695	37436848	chr9:37422695-37436848	0	+	37422695	37422695	8553170	9	110,131,73,117,89,105,136,131,188,	0,2149,3226,3842,5788,7036,7815,9312,13965,
#Partially deleted in new
chr9	37422713	37431719	chr9:37422713-37431719	0	+	37422713	37422713	8553170	7	120,131,73,117,89,105,1209,	0,2131,3208,3824,5770,7018,7797,
#Partially deleted in new
chr9	37422713	37426650	chr9:37422713-37426650	0	+	37422713	37422713	8553170	3	92,131,729,	0,2131,3208,
#Partially deleted in new
chr9	37422724	37436692	chr9:37422724-37436692	0	+	37422724	37422724	8553170	6	109,89,105,136,131,32,	0,5759,7007,7786,9283,13936,
#Partially deleted in new
chr9	37422745	37434879	chr9:37422745-37434879	1	+	37422750	37434257	789624	9	88,131,73,117,89,105,136,131,834,	0,2099,3176,3792,5738,6986,7765,9262,11300,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	37427705	37436989	chr9:37427705-37436989	0	+	37427705	37427705	8553170	2	4433,329,	0,8955,
#Partially deleted in new
chr9	37428537	37436987	chr9:37428537-37436987	0	+	37428537	37428537	8553170	4	1299,136,131,327,	0,1973,3470,8123,
#Partially deleted in new
chr9	37428994	37436990	chr9:37428994-37436990	0	+	37429667	37431100	0	3	842,641,110,	0,1516,7886,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	37429785	37432811	chr9:37429785-37432811	0	+	37429785	37429785	8553170	4	51,136,131,279,	0,725,2222,2747,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	37432086	37433881	chr9:37432086-37433881	0	+	37432086	37432086	8553170	2	322,48,	0,1747,
#Deleted in new
chr9	37434176	37434586	chr9:37434176-37434586	7	+	37434176	37434176	16724991	1	410,	0,
#Partially deleted in new
chr9	37438113	37465399	chr9:37438113-37465399	3	-	37440517	37442551	789624	2	4442,185,	0,27101,
#Deleted in new
chr9	37477148	37478317	chr9:37477148-37478317	7	+	37477148	37477148	16724991	1	1169,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	37485934	37503697	chr9:37485934-37503697	3	+	37486047	37503202	789624	12	189,104,77,86,59,145,108,97,134,82,132,655,	0,768,1928,3380,6722,7624,9234,9955,12156,14905,15778,17108,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	37485947	37503553	chr9:37485947-37503553	0	+	37486047	37492364	789624	13	176,104,77,86,94,59,145,108,97,134,82,132,511,	0,755,1915,3367,6334,6709,7611,9221,9942,12143,14892,15765,17095,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	37486152	37503697	chr9:37486152-37503697	1	+	37486440	37503202	789624	11	654,77,86,59,145,108,97,134,82,132,655,	0,1710,3162,6504,7406,9016,9737,11938,14687,15560,16890,
#Deleted in new
chr9	37490420	37490893	chr9:37490420-37490893	7	-	37490420	37490420	16724991	1	473,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	37509149	37510299	chr9:37509149-37510299	3	+	37509149	37509149	8553170	2	231,58,	0,1092,
#Partially deleted in new
chr9	37510891	37576253	chr9:37510891-37576253	3	-	37512546	37541768	789624	11	1830,182,314,270,153,71,137,150,834,591,43,	0,5012,7233,10677,11933,14210,18232,21017,26218,30292,65319,
#Partially deleted in new
chr9	37512546	37588874	chr9:37512546-37588874	0	-	37512546	37512546	8553170	9	175,182,314,270,153,71,137,150,62,	0,3357,5578,9022,10278,12555,16577,19362,76266,
#Partially deleted in new
chr9	37512546	37588874	chr9:37512546-37588874	0	-	37512546	37512546	8553170	11	175,182,314,270,153,71,137,150,834,591,122,	0,3357,5578,9022,10278,12555,16577,19362,24563,28637,76206,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	37514993	37576323	chr9:37514993-37576323	0	-	37522961	37541768	789624	9	1092,314,270,153,137,150,834,591,113,	0,3131,6575,7831,14130,16915,22116,26190,61217,
#Partially deleted in new
chr9	37521717	37536062	chr9:37521717-37536062	0	-	37521717	37521717	8553170	6	184,153,71,137,150,71,	0,1107,3384,7406,10191,14274,
#Partially deleted in new
chr9	37522346	37525157	chr9:37522346-37525157	0	-	37522346	37522346	8553170	3	142,153,56,	0,478,2755,
#Partially deleted in new
chr9	37541339	37592469	chr9:37541339-37592469	3	-	37588897	37592469	789624	3	435,122,160,	0,47471,50970,
#Partially deleted in new
chr9	37541555	37576349	chr9:37541555-37576349	0	-	37541555	37541768	789624	3	219,140,139,	0,33966,34655,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	37582645	37592469	chr9:37582645-37592469	0	-	37592253	37592469	789624	4	2605,129,120,217,	0,3392,6167,9607,
#Partially deleted in new
chr9	37588412	37592642	chr9:37588412-37592642	3	-	37588897	37592532	789624	2	520,231,	0,3999,
#Partially deleted in new
chr9	37588412	37592597	chr9:37588412-37592597	1	-	37588897	37592532	789624	2	520,288,	0,3897,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	37588412	38068687	chr9:37588412-38068687	3	-	38015424	38068645	8553170	12	520,124,101,150,79,122,120,172,216,107,121,759,	0,104729,139515,195501,243650,311416,360222,367470,386209,426961,427598,479516,
#Partially deleted in new
chr9	37588457	37592604	chr9:37588457-37592604	1	-	37588877	37592532	789624	2	475,314,	0,3833,
#Partially deleted in new
chr9	37588641	37592596	chr9:37588641-37592596	1	-	37592253	37592532	789624	2	291,344,	0,3611,
#Deleted in new
chr9	37636687	37637293	chr9:37636687-37637293	7	-	37636687	37636687	16724991	1	606,	0,
#Partially deleted in new
chr9	37650999	37746904	chr9:37650999-37746904	3	+	37692641	37746769	0	16	95,105,158,103,46,108,96,126,120,137,127,96,183,148,807,2516,	0,41638,56416,57399,60350,68069,73225,78728,79984,81304,82473,82730,84552,86096,89078,93389,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	37661746	37662049	chr9:37661746-37662049	3	-	37661746	37661746	8553170	1	303,	0,
#Partially deleted in new
chr9	37668004	37746904	chr9:37668004-37746904	1	+	37692641	37746769	0	16	589,105,158,103,46,108,96,126,120,137,127,96,183,148,807,2516,	0,24633,39411,40394,43345,51064,56220,61723,62979,64299,65468,65725,67547,69091,72073,76384,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	37669777	37707502	chr9:37669777-37707502	0	+	37692641	37707502	789624	3	307,105,87,	0,22860,37638,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	37753802	37778965	chr9:37753802-37778965	1	+	37761931	37777707	789624	7	50,215,153,79,68,124,1338,	0,8100,14273,16138,16869,22479,23825,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	37753802	37778965	chr9:37753802-37778965	1	+	37761931	37777707	789624	8	50,215,109,125,79,68,124,1338,	0,8100,8774,9826,16138,16869,22479,23825,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	37753816	37778972	chr9:37753816-37778972	3	+	37761931	37777707	789624	9	36,215,109,125,153,79,68,124,1372,	0,8086,8760,9812,14259,16124,16855,22465,23784,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	37753816	37778681	chr9:37753816-37778681	1	+	37762107	37777707	789624	8	36,215,125,153,79,68,124,1081,	0,8086,9812,14259,16124,16855,22465,23784,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	37753816	37778022	chr9:37753816-37778022	0	+	37761931	37763858	789624	9	36,215,109,237,153,79,68,124,422,	0,8086,8760,9812,14259,16124,16855,22465,23784,
#Partially deleted in new
chr9	37753816	37776430	chr9:37753816-37776430	0	+	37761931	37769950	789624	7	36,215,109,125,75,68,149,	0,8086,8760,9812,16128,16855,22465,
#Partially deleted in new
chr9	37753816	37768163	chr9:37753816-37768163	0	+	37761931	37763661	789624	4	36,215,237,88,	0,8086,9812,14259,
#Partially deleted in new
chr9	37753816	37763757	chr9:37753816-37763757	0	+	37761931	37762575	789624	4	36,215,143,129,	0,8086,8726,9812,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	37766977	37785061	chr9:37766977-37785061	0	-	37780859	37785044	0	4	528,606,150,341,	0,13297,16936,17743,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	37769556	37770755	chr9:37769556-37770755	0	+	37769556	37769556	8553170	2	463,84,	0,1115,
#Partially deleted in new
chr9	37779713	37785057	chr9:37779713-37785057	3	-	37780678	37785044	0	4	1167,152,150,337,	0,2272,4200,5007,
#Partially deleted in new
chr9	37780587	37784713	chr9:37780587-37784713	0	-	37780587	37780587	8553170	3	293,150,330,	0,3326,3796,
#Partially deleted in new
chr9	37780606	37785064	chr9:37780606-37785064	1	-	37780859	37785044	0	3	274,150,344,	0,3307,4114,
#Partially deleted in new
chr9	37780690	37800709	chr9:37780690-37800709	0	-	37780690	37780690	8553170	4	190,152,150,43,	0,1295,3223,19976,
#Partially deleted in new
chr9	37780805	37801437	chr9:37780805-37801437	0	-	37780805	37780805	8553170	4	75,152,150,85,	0,1180,3108,20547,
#Partially deleted in new
chr9	37781803	37784745	chr9:37781803-37784745	0	-	37781803	37781803	8553170	3	334,150,25,	0,2110,2917,
#Deleted in new
chr9	37783871	37784745	chr9:37783871-37784745	0	-	37783871	37783871	8553170	2	192,25,	0,849,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	37800501	37863325	chr9:37800501-37863325	3	+	37800866	37861508	789624	7	904,114,198,203,111,146,2186,	0,18786,41587,54278,56739,59546,60638,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	37800553	37867666	chr9:37800553-37867666	1	+	37800627	37861508	789624	7	94,114,198,203,111,146,6527,	0,18734,41535,54226,56687,59494,60586,
#Partially deleted in new
chr9	37819293	37860441	chr9:37819293-37860441	0	+	37819293	37819293	8553170	4	108,203,111,394,	0,35486,37947,40754,
#Deleted in new
chr9	37836043	37836394	chr9:37836043-37836394	7	+	37836043	37836043	16724991	1	351,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	37854818	37863325	chr9:37854818-37863325	0	+	37854818	37854818	8553170	3	164,146,2186,	0,5229,6321,
#Deleted in new
chr9	37858479	37861441	chr9:37858479-37861441	0	+	37858479	37858479	8553170	3	41,146,302,	0,1568,2660,
#Partially deleted in new
chr9	37878115	37879493	chr9:37878115-37879493	7	+	37878115	37878115	16724991	2	665,552,	0,826,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	37879399	37904353	chr9:37879399-37904353	0	-	37879399	37879399	789624	4	1349,114,122,286,	0,2118,20429,24668,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	37885682	37886390	chr9:37885682-37886390	7	+	37885682	37885682	16724991	1	708,	0,
#Partially deleted in new
chr9	37887603	37904110	chr9:37887603-37904110	3	-	37887656	37888550	789624	3	989,122,580,	0,12225,15927,
#Partially deleted in new
chr9	37887650	37904133	chr9:37887650-37904133	1	-	37887656	37888550	789624	3	942,122,66,	0,12178,16417,
#Partially deleted in new
chr9	37919133	38069211	chr9:37919133-38069211	3	-	37919820	38068645	789624	6	871,120,172,216,121,1283,	0,29501,36749,55488,96877,148795,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	37936706	37936768	chr9:37936706-37936768	3	-	37936706	37936706	8553170	1	62,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	38147427	38147561	chr9:38147427-38147561	3	+	38147427	38147427	8553170	1	134,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	38360426	38376430	chr9:38360426-38376430	3	+	38360426	38360426	8553170	4	88,66,114,131,	0,12485,14902,15873,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	38392663	38398661	chr9:38392663-38398661	3	+	38395748	38397302	789624	2	144,2922,	0,3076,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	38392711	38396138	chr9:38392711-38396138	0	+	38395748	38396138	789624	3	96,89,399,	0,1765,3028,
#Partially deleted in new
chr9	38408993	38424447	chr9:38408993-38424447	3	-	38411399	38424424	789624	5	224,159,117,110,483,	0,2397,4243,5100,14971,
#Partially deleted in new
chr9	38433695	38463006	chr9:38433695-38463006	5	+	38433695	38433695	16724991	6	56,353,164,76,101,904,	0,1898,3993,22422,24672,28407,
#Partially deleted in new
chr9	38433697	38543880	chr9:38433697-38543880	5	+	38433697	38433697	16724991	10	54,353,164,76,101,131,119,46,148,173,	0,1896,3991,22420,24670,28405,36149,38190,107620,110010,
#Deleted in new
chr9	38452781	38454070	chr9:38452781-38454070	7	-	38452781	38452781	16724991	1	1289,	0,
#Partially deleted in new
chr9	38456117	38471933	chr9:38456117-38471933	7	+	38456117	38456117	16724991	5	76,101,131,119,46,	0,2250,5985,13729,15770,
#Deleted in new
chr9	38478470	38479350	chr9:38478470-38479350	7	+	38478470	38478470	16724991	1	880,	0,
#Deleted in new
chr9	38486858	38488338	chr9:38486858-38488338	7	-	38486858	38486858	16724991	1	1480,	0,
#Deleted in new
chr9	38504446	38505482	chr9:38504446-38505482	7	-	38504446	38504446	16724991	1	1036,	0,
#Deleted in new
chr9	38526830	38527032	chr9:38526830-38527032	7	+	38526830	38526830	16724991	1	202,	0,
#Deleted in new
chr9	38527096	38527912	chr9:38527096-38527912	7	+	38527096	38527096	16724991	1	816,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	38540566	38542792	chr9:38540566-38542792	5	-	38540566	38540566	16724991	3	283,107,481,	0,889,1745,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	38540568	38545372	chr9:38540568-38545372	0	-	38540568	38540568	789624	3	281,2327,57,	0,1743,4747,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	38540568	38571152	chr9:38540568-38571152	0	-	38543252	38571152	789624	6	281,107,278,108,125,31,	0,887,1743,2379,2670,30553,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	38540568	38577207	chr9:38540568-38577207	3	-	38543252	38577207	789624	8	994,744,125,80,54,46,223,155,	0,1743,2670,30553,31437,32515,34907,36484,
#Deleted in new
chr9	38542313	38542569	chr9:38542313-38542569	7	-	38542313	38542313	16724991	1	256,	0,
#Deleted in new
chr9	38542388	38543215	chr9:38542388-38543215	3	-	38542388	38542388	8553170	2	201,268,	0,559,
#Partially deleted in new
chr9	38542478	38568422	chr9:38542478-38568422	3	-	38542478	38542478	8553170	3	111,108,416,	0,469,25528,
#Deleted in new
chr9	38543103	38543446	chr9:38543103-38543446	7	-	38543103	38543103	16724991	1	343,	0,
#Partially deleted in new
chr9	38543252	38577156	chr9:38543252-38577156	0	-	38543252	38543252	8553170	7	111,36,80,54,46,223,104,	0,208,27869,28753,29831,32223,33800,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	38566259	38568009	chr9:38566259-38568009	7	-	38566259	38566259	16724991	1	1750,	0,
#Deleted in new
chr9	38567376	38568211	chr9:38567376-38568211	5	-	38567376	38567376	16724991	1	835,	0,
#Partially deleted in new
chr9	38571357	38620660	chr9:38571357-38620660	3	-	38572044	38620285	789624	16	702,223,212,282,130,113,150,918,74,54,68,138,107,174,115,581,	0,4118,5695,6509,14825,17193,22402,24128,29773,31801,36068,38915,39857,44236,44572,48722,
#Partially deleted in new
chr9	38571357	38595509	chr9:38571357-38595509	0	-	38573057	38595509	789624	8	1772,223,212,282,130,113,150,24,	0,4118,5695,6509,14825,17193,22402,24128,
#Deleted in new
chr9	38620473	38622466	chr9:38620473-38622466	2	+	38620473	38620473	8553170	2	121,635,	0,1358,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	38620733	38623284	chr9:38620733-38623284	0	+	38620733	38620733	8553170	2	289,1453,	0,1098,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	38621087	38624990	chr9:38621087-38624990	1	+	38621087	38621087	5263520	2	278,3159,	0,744,
#Deleted in new
chr9	38643041	38643768	chr9:38643041-38643768	7	+	38643041	38643041	16724991	1	727,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	38650214	38662717	chr9:38650214-38662717	0	+	38650214	38650214	8553170	2	134,1415,	0,11088,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	38650256	38662717	chr9:38650256-38662717	3	+	38650256	38650256	8553170	2	120,4029,	0,8432,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	38680005	38680104	chr9:38680005-38680104	3	+	38680005	38680005	8553170	1	99,	0,
#Partially deleted in new
chr9	38694262	38720428	chr9:38694262-38720428	3	-	38694775	38703999	789624	3	607,146,407,	0,9594,25759,
#Partially deleted in new
chr9	38804006	38851916	chr9:38804006-38851916	3	+	38804006	38804006	8553170	3	102,111,678,	0,44558,47232,
#Partially deleted in new
chr9	39016968	39039594	chr9:39016968-39039594	7	+	39016968	39016968	16724991	7	69,64,171,160,125,148,675,	0,9482,9687,11210,11896,21447,21951,
#Partially deleted in new
chr9	39072766	39288138	chr9:39072766-39288138	3	-	39073889	39288064	789624	24	1245,72,231,88,134,225,240,219,171,128,157,204,120,107,172,144,262,144,185,204,148,194,111,159,	0,5618,5923,12969,13949,15656,27144,29730,30977,36393,45336,60165,67752,71473,77039,93166,98602,103182,104551,105390,120361,166226,194129,215213,
#Partially deleted in new
chr9	39072766	39288303	chr9:39072766-39288303	1	-	39073889	39288064	789624	23	1245,72,231,88,134,225,219,171,128,157,201,120,107,172,144,262,144,185,204,148,194,111,324,	0,5618,5923,12969,13949,15656,29730,30977,36393,45336,60165,67752,71473,77039,93166,98602,103182,104551,105390,120361,166226,194129,215213,
#Partially deleted in new
chr9	39073673	39088473	chr9:39073673-39088473	0	-	39073673	39073673	8553170	5	338,154,88,134,51,	0,4629,12062,13042,14749,
#Partially deleted in new
chr9	39078817	39086148	chr9:39078817-39086148	0	-	39078817	39078817	8553170	3	103,88,100,	0,6918,7231,
#Partially deleted in new
chr9	39084976	39239174	chr9:39084976-39239174	1	-	39086685	39239118	789624	18	1873,225,240,219,171,128,157,204,120,107,172,144,262,144,185,204,148,182,	0,3446,14934,17520,18767,24183,33126,47955,55542,59263,64829,80956,86392,90972,92341,93180,108151,154016,
#Partially deleted in new
chr9	39099814	39103914	chr9:39099814-39103914	0	-	39099814	39099814	8553170	3	350,219,201,	0,2682,3899,
#Partially deleted in new
chr9	39103678	39140576	chr9:39103678-39140576	0	-	39103678	39103678	8553170	4	236,157,201,58,	0,14424,29253,36840,
#Partially deleted in new
chr9	39103680	39288315	chr9:39103680-39288315	0	-	39109270	39288064	789624	13	234,128,201,120,144,262,144,185,204,148,194,111,336,	0,5479,29251,36838,62252,67688,72268,73637,74476,89447,135312,163215,184299,
#Partially deleted in new
chr9	39103690	39109287	chr9:39103690-39109287	0	-	39103690	39103690	8553170	3	224,123,128,	0,2794,5469,
#Partially deleted in new
chr9	39117926	39288303	chr9:39117926-39288303	1	-	39118098	39288064	789624	14	333,201,120,107,172,144,262,144,185,204,148,194,111,324,	0,15005,22592,26313,31879,48006,53442,58022,59391,60230,75201,121066,148969,170053,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	39139749	39140617	chr9:39139749-39140617	0	-	39139749	39139749	8553170	2	318,99,	0,769,
#Deleted in new
chr9	39154074	39155479	chr9:39154074-39155479	7	+	39154074	39154074	16724991	2	982,208,	0,1197,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	39159070	39160319	chr9:39159070-39160319	7	+	39159070	39159070	16724991	1	1249,	0,
#Partially deleted in new
chr9	39172785	39267006	chr9:39172785-39267006	0	-	39172785	39172785	8553170	7	1755,144,185,204,148,194,111,	0,3163,4532,5371,20342,66207,94110,
#Deleted in new
chr9	39173793	39174513	chr9:39173793-39174513	7	-	39173793	39173793	16724991	1	720,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	39191099	39191360	chr9:39191099-39191360	3	+	39191099	39191099	8553170	1	261,	0,
#Partially deleted in new
chr9	39355668	39361959	chr9:39355668-39361959	3	+	39355688	39361809	789624	4	251,58,61,3886,	0,1463,2089,2405,
#Deleted in new
chr9	39357334	39358699	chr9:39357334-39358699	0	+	39357334	39357334	8553170	3	98,61,626,	0,423,739,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	39359889	39369105	chr9:39359889-39369105	5	-	39359889	39359889	16724991	2	1361,627,	0,8589,
#Deleted in new
chr9	39368376	39368701	chr9:39368376-39368701	7	-	39368376	39368376	16724991	1	325,	0,
#Partially deleted in new
chr9	39371064	39376916	chr9:39371064-39376916	3	+	39371064	39371064	789624	2	546,77,	0,5775,
#Deleted in new
chr9	39371243	39371624	chr9:39371243-39371624	0	+	39371243	39371243	8553170	1	381,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	39384505	39405305	chr9:39384505-39405305	3	-	39384505	39384505	8553170	3	101,107,268,	0,906,20532,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	39395736	39397406	chr9:39395736-39397406	3	-	39395736	39395736	8553170	2	839,238,	0,1432,
#Deleted in new
chr9	39443814	39447189	chr9:39443814-39447189	5	-	39443814	39443814	16724991	1	3375,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	39444303	39508885	chr9:39444303-39508885	7	-	39444303	39444303	16724991	4	3149,96,127,36,	0,12205,12576,64546,
#Deleted in new
chr9	39485378	39485865	chr9:39485378-39485865	7	+	39485378	39485378	16724991	1	487,	0,
#Partially deleted in new
chr9	39631045	39632416	chr9:39631045-39632416	7	+	39631045	39631045	16724991	1	1371,	0,
#Deleted in new
chr9	39651900	39652377	chr9:39651900-39652377	7	-	39651900	39651900	16724991	1	477,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	39654240	39655531	chr9:39654240-39655531	7	-	39654240	39654240	16724991	1	1291,	0,
#Partially deleted in new
chr9	39734669	39735628	chr9:39734669-39735628	7	+	39734669	39734669	16724991	2	312,329,	0,630,
#Deleted in new
chr9	39739746	39741193	chr9:39739746-39741193	7	-	39739746	39739746	16724991	1	1447,	0,
#Partially deleted in new
chr9	39748513	39810054	chr9:39748513-39810054	3	-	39748513	39748513	8553170	4	96,228,236,324,	0,945,29817,61217,
#Partially deleted in new
chr9	39777349	39810097	chr9:39777349-39810097	1	-	39777349	39777349	8553170	4	1217,51,130,367,	0,1544,32136,32381,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	39807360	39810063	chr9:39807360-39810063	1	-	39807360	39807360	789624	2	2255,333,	0,2370,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	39807380	39810058	chr9:39807380-39810058	0	-	39807380	39807380	789624	2	2253,328,	0,2350,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	39807694	39810013	chr9:39807694-39810013	0	-	39807694	39807694	789624	3	1067,130,283,	0,1791,2036,
#Deleted in new
chr9	39809561	39810019	chr9:39809561-39810019	7	+	39809561	39809561	16724991	1	458,	0,
#Partially deleted in new
chr9	39816541	40106661	chr9:39816541-40106661	7	-	39816541	39816541	16724991	4	1188,104,111,304,	0,2279,70908,289816,
#Partially deleted in new
chr9	39817529	39818923	chr9:39817529-39818923	5	-	39817529	39817529	16724991	2	200,103,	0,1291,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	39873930	39874390	chr9:39873930-39874390	7	-	39873930	39873930	16724991	1	460,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	39886860	39887144	chr9:39886860-39887144	3	-	39886860	39886860	8553170	1	284,	0,
#Deleted in new
chr9	39892445	39892540	chr9:39892445-39892540	3	+	39892445	39892445	8553170	1	95,	0,
#Deleted in new
chr9	39892549	39892895	chr9:39892549-39892895	7	+	39892549	39892549	16724991	1	346,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	39983792	40106611	chr9:39983792-40106611	3	-	39983792	39983792	8553170	4	618,121,73,254,	0,4651,6717,122565,
#Deleted in new
chr9	39983820	39984401	chr9:39983820-39984401	7	-	39983820	39983820	16724991	1	581,	0,
#Deleted in new
chr9	40105821	40106527	chr9:40105821-40106527	7	+	40105821	40105821	16724991	1	706,	0,
#Deleted in new
chr9	40121961	40122540	chr9:40121961-40122540	7	+	40121961	40121961	16724991	1	579,	0,
#Partially deleted in new
chr9	40130920	40153147	chr9:40130920-40153147	3	+	40130920	40130920	8553170	3	123,97,127,	0,21775,22100,
#Deleted in new
chr9	40131746	40132218	chr9:40131746-40132218	7	+	40131746	40131746	16724991	1	472,	0,
#Deleted in new
chr9	40167391	40171329	chr9:40167391-40171329	7	+	40167391	40167391	16724991	5	43,42,60,85,80,	0,1262,1393,2112,3858,
#Partially deleted in new
chr9	40187791	40193921	chr9:40187791-40193921	7	-	40187791	40187791	16724991	4	155,301,174,467,	0,3672,4477,5663,
#Partially deleted in new
chr9	40223284	40266392	chr9:40223284-40266392	3	+	40223396	40265465	789624	15	315,115,174,107,138,56,31,70,85,29,73,71,164,181,1902,	0,3622,3899,7958,9111,11848,18444,21161,25179,27972,28092,34135,38264,39855,41206,
#Partially deleted in new
chr9	40223316	40227420	chr9:40223316-40227420	1	+	40223396	40227409	789624	2	283,237,	0,3867,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	40230409	40258779	chr9:40230409-40258779	0	+	40230409	40230409	8553170	8	134,138,56,132,29,73,71,114,	0,1986,4723,9271,20847,20967,27010,28256,
#Deleted in new
chr9	40233922	40234029	chr9:40233922-40234029	3	+	40233922	40233922	8553170	1	107,	0,
#Partially deleted in new
chr9	40264970	40274085	chr9:40264970-40274085	0	+	40264970	40264970	8553170	4	444,150,113,87,	0,1980,6916,9028,
#Partially deleted in new
chr9	40273998	40284584	chr9:40273998-40284584	0	+	40273998	40273998	8553170	3	130,212,194,	0,8273,10392,
#Deleted in new
chr9	40291274	40291502	chr9:40291274-40291502	7	-	40291274	40291274	16724991	1	228,	0,
#Deleted in new
chr9	40293081	40293955	chr9:40293081-40293955	7	+	40293081	40293081	16724991	1	874,	0,
#Deleted in new
chr9	40323724	40325559	chr9:40323724-40325559	0	+	40323724	40323724	8553170	3	361,216,98,	0,862,1737,
#Deleted in new
chr9	40323724	40324801	chr9:40323724-40324801	0	+	40323724	40323724	8553170	2	458,251,	0,826,
#Deleted in new
chr9	40323724	40325529	chr9:40323724-40325529	0	+	40323724	40323724	8553170	4	361,252,108,68,	0,826,1260,1737,
#Deleted in new
chr9	40323724	40325634	chr9:40323724-40325634	0	+	40323724	40323724	8553170	3	361,119,173,	0,959,1737,
#Deleted in new
chr9	40323724	40325637	chr9:40323724-40325637	0	+	40323724	40323724	8553170	3	361,252,50,	0,826,1863,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	40324529	40329221	chr9:40324529-40329221	1	+	40324529	40324529	8553170	1	4692,	0,
#Deleted in new
chr9	40324666	40325976	chr9:40324666-40325976	1	+	40324666	40324666	8553170	3	136,108,515,	0,318,795,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	40325481	40329111	chr9:40325481-40329111	1	+	40325481	40325481	8553170	4	249,162,163,194,	0,802,2461,3436,
#Partially deleted in new
chr9	40332994	40333460	chr9:40332994-40333460	7	-	40332994	40332994	16724991	1	466,	0,
#Deleted in new
chr9	40346143	40347052	chr9:40346143-40347052	7	-	40346143	40346143	16724991	1	909,	0,
#Deleted in new
chr9	40348598	40349791	chr9:40348598-40349791	7	+	40348598	40348598	16724991	1	1193,	0,
#Deleted in new
chr9	40358453	40358682	chr9:40358453-40358682	7	+	40358453	40358453	16724991	1	229,	0,
#Partially deleted in new
chr9	40481557	40497592	chr9:40481557-40497592	7	-	40481557	40481557	16724991	7	284,218,119,138,124,142,24,	0,642,1070,1397,1962,9657,16011,
#Partially deleted in new
chr9	40481558	40497591	chr9:40481558-40497591	7	-	40481558	40481558	16724991	7	283,218,119,138,124,130,26,	0,641,1069,1396,1961,9668,16007,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	40497849	40511177	chr9:40497849-40511177	5	+	40497849	40497849	16724991	5	640,108,153,108,292,	0,2801,5281,10054,13036,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	40497849	40512575	chr9:40497849-40512575	5	+	40497849	40497849	16724991	4	640,108,153,1690,	0,2801,5281,13036,
#Partially deleted in new
chr9	40498939	40512550	chr9:40498939-40512550	4	+	40498939	40498939	16724991	4	103,108,153,1665,	0,1711,4191,11946,
#Partially deleted in new
chr9	40499080	40503239	chr9:40499080-40503239	4	+	40499080	40499080	16724991	4	156,103,108,109,	0,598,1570,4050,
#Partially deleted in new
chr9	40499682	40508193	chr9:40499682-40508193	4	+	40499682	40499682	16724991	4	99,108,153,282,	0,968,3448,8229,
#Deleted in new
chr9	40500650	40503283	chr9:40500650-40503283	5	+	40500650	40500650	16724991	2	108,153,	0,2480,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	40500653	40566583	chr9:40500653-40566583	4	+	40500653	40500653	16724991	3	105,153,250,	0,2477,65680,
#Partially deleted in new
chr9	40500682	40566779	chr9:40500682-40566779	7	+	40500682	40500682	16724991	4	76,153,108,121,	0,2448,7221,65976,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	40505398	40566281	chr9:40505398-40566281	3	-	40505398	40505398	8553170	2	422,184,	0,60699,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	40611251	40622155	chr9:40611251-40622155	3	-	40611251	40611251	8553170	5	489,137,404,151,82,	0,978,2896,3540,10822,
#Deleted in new
chr9	40641840	40642117	chr9:40641840-40642117	7	-	40641840	40641840	16724991	1	277,	0,
#Partially deleted in new
chr9	40755406	40767875	chr9:40755406-40767875	7	-	40755406	40755406	16724991	6	95,79,136,174,115,58,	0,2848,5510,7895,8231,12411,
#Deleted in new
chr9	40759599	40759706	chr9:40759599-40759706	3	-	40759599	40759599	8553170	1	107,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	40767869	40806344	chr9:40767869-40806344	3	+	40767869	40767869	8553170	5	80,31,74,73,249,	0,8456,21403,31141,38226,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	40789275	40806329	chr9:40789275-40806329	0	+	40789275	40789275	8553170	2	71,234,	0,16820,
#Deleted in new
chr9	40883633	40883763	chr9:40883633-40883763	7	+	40883633	40883633	16724991	1	130,	0,
#Deleted in new
chr9	40929009	40929092	chr9:40929009-40929092	3	-	40929009	40929009	5263520	1	83,	0,
#Partially deleted in new
chr9	40992248	41008993	chr9:40992248-41008993	5	+	40992248	40992248	16724991	4	231,182,67,113,	0,1004,2384,16632,
#Partially deleted in new
chr9	40992260	41008946	chr9:40992260-41008946	4	+	40992260	40992260	16724991	4	515,182,67,66,	0,992,2372,16620,
#Partially deleted in new
chr9	40992316	41033012	chr9:40992316-41033012	4	+	40992316	40992316	16724991	5	459,67,126,114,179,	0,2316,16564,19300,40517,
#Partially deleted in new
chr9	40992425	41218410	chr9:40992425-41218410	7	+	40992425	40992425	16724991	10	54,67,126,50,114,34,76,90,110,36,	0,2207,16455,17368,19191,202675,220314,223593,224661,225949,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	41006998	41074617	chr9:41006998-41074617	7	-	41006998	41006998	16724991	9	536,90,142,155,191,126,147,163,430,	0,18765,24372,32612,33361,37501,40544,46738,67189,
#Deleted in new
chr9	41012230	41014133	chr9:41012230-41014133	3	+	41012230	41012230	8553170	1	1903,	0,
#Partially deleted in new
chr9	41039610	41074448	chr9:41039610-41074448	5	-	41039610	41039610	16724991	6	155,191,126,147,163,261,	0,749,4889,7932,14126,34577,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	41061289	41062917	chr9:41061289-41062917	3	+	41061289	41061289	8553170	1	1628,	0,
#Deleted in new
chr9	41073709	41076392	chr9:41073709-41076392	3	+	41073709	41073709	8553170	2	264,417,	0,2266,
#Deleted in new
chr9	41073734	41076392	chr9:41073734-41076392	0	+	41073734	41073734	8553170	2	119,417,	0,2241,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	41100793	41103816	chr9:41100793-41103816	0	-	41100793	41100793	8553170	3	501,111,132,	0,1937,2891,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	41100983	41106229	chr9:41100983-41106229	3	-	41100983	41100983	8553170	4	311,69,2429,65,	0,1479,1747,5181,
#Deleted in new
chr9	41126429	41128463	chr9:41126429-41128463	3	-	41127129	41128383	789624	1	2034,	0,
#Partially deleted in new
chr9	41131305	41189364	chr9:41131305-41189364	1	-	41131733	41188055	789624	16	535,130,66,69,52,57,45,87,47,38,60,92,97,87,98,260,	0,922,2199,2368,13975,25077,31027,33695,35478,41406,42987,51069,52258,54687,56704,57799,
#Partially deleted in new
chr9	41131307	41189436	chr9:41131307-41189436	3	-	41131733	41189258	789624	15	533,130,66,69,52,57,45,87,47,38,60,92,97,87,332,	0,920,2197,2366,13973,25075,31025,33693,35476,41404,42985,51067,52256,54685,57797,
#Partially deleted in new
chr9	41131308	41189310	chr9:41131308-41189310	1	-	41131733	41189258	789624	14	532,130,66,69,52,45,87,47,38,60,92,97,87,206,	0,919,2196,2365,13972,31024,33692,35475,41403,42984,51066,52255,54684,57796,
#Partially deleted in new
chr9	41131324	41189127	chr9:41131324-41189127	0	-	41171919	41189127	789624	16	516,130,66,69,52,57,45,87,47,88,38,60,92,97,87,23,	0,903,2180,2349,13956,25058,31008,33676,35459,40522,41387,42968,51050,52239,54668,57780,
#Partially deleted in new
chr9	41131355	41189301	chr9:41131355-41189301	0	-	41171919	41189258	789624	16	485,130,66,69,52,57,123,45,47,140,88,38,92,97,87,197,	0,872,2149,2318,13925,25027,30245,30977,35428,38928,40491,41356,51019,52208,54637,57749,
#Partially deleted in new
chr9	41131355	41145992	chr9:41131355-41145992	0	-	41131355	41131355	8553170	3	2215,69,712,	0,2318,13925,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	41131357	41158916	chr9:41131357-41158916	0	-	41131357	41131357	8553170	6	483,130,66,69,52,2534,	0,870,2147,2316,13923,25025,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	41131675	41177919	chr9:41131675-41177919	0	-	41131675	41131675	8553170	13	165,130,66,69,52,57,123,45,87,47,38,60,1622,	0,552,1829,1998,13605,24707,29925,30657,33325,35108,41036,42617,44622,
#Partially deleted in new
chr9	41131676	41176914	chr9:41131676-41176914	0	-	41131676	41131676	8553170	15	164,130,66,69,52,57,217,45,87,47,140,88,38,60,617,	0,551,1828,1997,13604,24706,29128,30656,33324,35107,38607,40170,41035,42616,44621,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr9	41131677	41189339	chr9:41131677-41189339	0	-	41171919	41189258	789624	17	163,130,66,69,52,819,258,45,87,47,88,38,60,92,97,87,235,	0,550,1827,1996,13603,24705,29086,30655,33323,35106,40169,41034,42615,50697,51886,54315,57427,
#Deleted in new
chr9	41131677	41134034	chr9:41131677-41134034	0	-	41131677	41131677	8553170	4	163,130,66,361,	0,550,1827,1996,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr9	41131678	41199261	chr9:41131678-41199261	0	-	41131678	41131678	8553170	22	162,130,66,69,52,57,207,84,42,123,45,87,47,88,38,60,92,97,87,129,59,158,	0,549,1826,1995,13602,24704,26444,29259,29748,29922,30654,33322,35105,40168,41033,42614,50696,51885,54314,64488,67128,67425,
#Partially deleted in new
chr9	41131702	41142291	chr9:41131702-41142291	0	-	41131702	41131702	8553170	5	138,130,66,69,46,	0,525,1802,1971,10543,
#Partially deleted in new
chr9	41145317	41182395	chr9:41145317-41182395	0	-	41170402	41182395	789624	10	15,57,84,45,87,47,145,38,60,21,	0,11065,15620,17015,19683,21466,24961,27394,28975,37057,
#Partially deleted in new
chr9	41156394	41170344	chr9:41156394-41170344	0	-	41156394	41156394	8553170	6	45,84,45,87,47,61,	0,4543,5938,8606,10389,13889,
#Partially deleted in new
chr9	41164132	41174324	chr9:41164132-41174324	0	-	41164132	41164132	8553170	5	955,47,88,38,32,	0,2651,7714,8579,10160,
#Partially deleted in new
chr9	41165023	41183574	chr9:41165023-41183574	0	-	41170402	41183574	789624	7	64,47,140,38,60,92,11,	0,1760,5260,7688,9269,17351,18540,
#Partially deleted in new
chr9	41171919	41189436	chr9:41171919-41189436	1	-	41171919	41189258	789624	7	15,38,60,92,97,87,332,	0,792,2373,10455,11644,14073,17185,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	41233754	41233835	chr9:41233754-41233835	3	+	41233754	41233754	5263520	1	81,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	41237439	41237557	chr9:41237439-41237557	3	-	41237439	41237439	8553170	1	118,	0,
#Deleted in new
chr9	41269915	41273997	chr9:41269915-41273997	7	-	41269915	41269915	16724991	2	3366,714,	0,3368,
#Deleted in new
chr9	41269915	41273997	chr9:41269915-41273997	0	-	41269915	41269915	8553170	1	4082,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	41276279	41282846	chr9:41276279-41282846	3	+	41276279	41276279	789624	3	157,378,2588,	0,3162,3979,
#Deleted in new
chr9	41280459	41280787	chr9:41280459-41280787	7	+	41280459	41280459	16724991	1	328,	0,
#Deleted in new
chr9	41292886	41294125	chr9:41292886-41294125	7	+	41292886	41292886	16724991	1	1239,	0,
#Partially deleted in new
chr9	41310815	41332962	chr9:41310815-41332962	3	-	41310815	41310815	8553170	3	133,97,141,	0,361,22006,
#Deleted in new
chr9	41340999	41342041	chr9:41340999-41342041	7	-	41340999	41340999	16724991	3	155,179,247,	0,433,795,
#Deleted in new
chr9	41479959	41480548	chr9:41479959-41480548	7	+	41479959	41479959	16724991	1	589,	0,
#Deleted in new
chr9	41573155	41573453	chr9:41573155-41573453	7	-	41573155	41573155	16724991	1	298,	0,
#Deleted in new
chr9	41573511	41573606	chr9:41573511-41573606	3	-	41573511	41573511	8553170	1	95,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	41578902	41579186	chr9:41578902-41579186	3	+	41578902	41578902	8553170	1	284,	0,
#Deleted in new
chr9	41644429	41644770	chr9:41644429-41644770	7	-	41644429	41644429	16724991	1	341,	0,
#Deleted in new
chr9	41644770	41644981	chr9:41644770-41644981	7	+	41644770	41644770	16724991	1	211,	0,
#Deleted in new
chr9	41647824	41648035	chr9:41647824-41648035	7	-	41647824	41647824	16724991	1	211,	0,
#Deleted in new
chr9	41648022	41648425	chr9:41648022-41648425	7	+	41648022	41648022	16724991	1	403,	0,
#Deleted in new
chr9	41651934	41652172	chr9:41651934-41652172	7	-	41651934	41651934	16724991	1	238,	0,
#Deleted in new
chr9	41652894	41652973	chr9:41652894-41652973	7	-	41652894	41652894	16724991	1	79,	0,
#Partially deleted in new
chr9	41657707	41698910	chr9:41657707-41698910	3	-	41657707	41657707	8553170	3	277,152,71,	0,36676,41132,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	41672294	41672406	chr9:41672294-41672406	3	-	41672294	41672294	8553170	1	112,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	41687110	41698972	chr9:41687110-41698972	1	-	41687110	41687110	8553170	4	135,299,152,133,	0,715,7273,11729,
#Partially deleted in new
chr9	41694356	41699072	chr9:41694356-41699072	0	-	41694356	41694356	8553170	2	179,233,	0,4483,
#Partially deleted in new
chr9	41694356	41698960	chr9:41694356-41698960	0	-	41694356	41694356	789624	2	171,121,	0,4483,
#Deleted in new
chr9	41700479	41700696	chr9:41700479-41700696	7	-	41700479	41700479	16724991	1	217,	0,
#Deleted in new
chr9	41700681	41701096	chr9:41700681-41701096	7	+	41700681	41700681	16724991	1	415,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	41760087	41764175	chr9:41760087-41764175	3	+	41760087	41760087	8553170	3	431,122,323,	0,3553,3765,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	41760090	41761497	chr9:41760090-41761497	0	+	41760090	41760090	8553170	1	1407,	0,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr9	41890313	42129250	chr9:41890313-42129250	1	-	41893988	42129094	789624	23	3797,72,231,88,134,225,219,171,128,157,201,120,107,172,144,262,144,185,204,148,194,111,241,	0,8148,8455,15554,16540,18243,32363,33609,39003,47930,62869,70459,74224,79760,95854,101296,105891,107254,108087,123064,186555,214315,238696,
#Partially deleted in new
chr9	41891886	41908681	chr9:41891886-41908681	0	-	41893988	41908681	789624	5	2224,72,88,134,125,	0,6575,13981,14967,16670,
#Partially deleted in new
chr9	41892869	42129487	chr9:41892869-42129487	3	-	41893988	42129094	789624	24	1241,72,231,88,134,225,240,219,171,128,157,204,120,107,172,144,262,144,185,204,148,194,111,478,	0,5592,5899,12998,13984,15687,27200,29807,31053,36447,45374,60313,67903,71668,77204,93298,98740,103335,104698,105531,120508,183999,211759,236140,
#Partially deleted in new
chr9	41893836	42129250	chr9:41893836-42129250	0	-	41906971	42129094	789624	22	274,72,231,88,134,172,240,219,171,128,157,201,120,144,262,144,185,204,148,194,111,241,	0,4625,4932,12031,13017,14773,26233,28840,30086,35480,44407,59346,66936,92331,97773,102368,103731,104564,119541,183032,210792,235173,
#Deleted in new
chr9	41898471	41899944	chr9:41898471-41899944	0	-	41898471	41898471	8553170	2	62,1176,	0,297,
#Partially deleted in new
chr9	41898495	41906340	chr9:41898495-41906340	0	-	41898495	41898495	8553170	3	38,231,473,	0,273,7372,
#Partially deleted in new
chr9	41898896	41906279	chr9:41898896-41906279	0	-	41898896	41898896	8553170	3	103,88,99,	0,6971,7284,
#Partially deleted in new
chr9	41904889	41908570	chr9:41904889-41908570	0	-	41904889	41904889	8553170	5	218,88,99,130,14,	0,978,1291,1964,3667,
#Partially deleted in new
chr9	41905097	42129240	chr9:41905097-42129240	0	-	41905097	41905097	8553170	20	1890,225,240,219,171,128,157,204,120,107,172,144,262,144,185,204,148,194,111,231,	0,3459,14972,17579,18825,24219,33146,48085,55675,59440,64976,81070,86512,91107,92470,93303,108280,171771,199531,223912,
#Partially deleted in new
chr9	41923859	42129357	chr9:41923859-42129357	0	-	41929427	42129094	789624	13	234,128,204,120,144,262,144,185,204,148,194,111,348,	0,5457,29323,36913,62308,67750,72345,73708,74541,89518,153009,180769,205150,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	41923868	41953207	chr9:41923868-41953207	0	-	41923868	41953207	789624	4	225,123,128,25,	0,2787,5448,29314,
#Partially deleted in new
chr9	41938059	42129125	chr9:41938059-42129125	1	-	41938239	42129094	789624	12	341,201,120,144,262,144,185,204,148,194,111,116,	0,15123,22713,48108,53550,58145,59508,60341,75318,138809,166569,190950,
#Partially deleted in new
chr9	41938062	42129345	chr9:41938062-42129345	1	-	41938239	42129094	789624	14	338,201,120,107,172,144,262,144,185,204,148,194,111,336,	0,15120,22710,26475,32011,48105,53547,58142,59505,60338,75315,138806,166566,190947,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	41960002	41960892	chr9:41960002-41960892	0	-	41960002	41960002	8553170	2	318,120,	0,770,
#Deleted in new
chr9	41974361	41975768	chr9:41974361-41975768	7	+	41974361	41974361	16724991	2	982,210,	0,1197,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	41979351	41983753	chr9:41979351-41983753	7	+	41979351	41979351	16724991	2	1336,473,	0,3929,
#Partially deleted in new
chr9	41993026	42129510	chr9:41993026-42129510	1	-	41994707	42129094	789624	8	1753,144,185,204,148,194,111,501,	0,3178,4541,5374,20351,83842,111602,135983,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	42011349	42011610	chr9:42011349-42011610	3	+	42011349	42011349	8553170	1	261,	0,
#Partially deleted in new
chr9	42183658	42189882	chr9:42183658-42189882	3	+	42183687	42189734	789624	4	218,58,61,3872,	0,1410,2036,2352,
#Deleted in new
chr9	42185271	42186620	chr9:42185271-42186620	0	+	42185271	42185271	8553170	3	98,61,610,	0,423,739,
#Deleted in new
chr9	42196332	42196662	chr9:42196332-42196662	7	-	42196332	42196332	16724991	1	330,	0,
#Partially deleted in new
chr9	42198999	42204988	chr9:42198999-42204988	3	+	42198999	42198999	8553170	2	650,77,	0,5912,
#Deleted in new
chr9	42213840	42213918	chr9:42213840-42213918	7	-	42213840	42213840	16724991	1	78,	0,
#Partially deleted in new
chr9	42384804	42386136	chr9:42384804-42386136	7	+	42384804	42384804	16724991	1	1332,	0,
#Deleted in new
chr9	42408525	42409006	chr9:42408525-42409006	7	-	42408525	42408525	16724991	1	481,	0,
#Partially deleted in new
chr9	42410829	42412150	chr9:42410829-42412150	7	-	42410829	42410829	16724991	1	1321,	0,
#Partially deleted in new
chr9	42492662	42493570	chr9:42492662-42493570	7	+	42492662	42492662	16724991	2	263,334,	0,574,
#Deleted in new
chr9	42497703	42499134	chr9:42497703-42499134	7	-	42497703	42497703	16724991	1	1431,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	42566678	42569353	chr9:42566678-42569353	3	-	42566678	42566678	8553170	2	2254,325,	0,2350,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	42566992	42569310	chr9:42566992-42569310	1	-	42566992	42566992	8553170	3	1067,130,282,	0,1792,2036,
#Deleted in new
chr9	42568864	42569315	chr9:42568864-42569315	7	+	42568864	42568864	16724991	1	451,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	42579413	42586534	chr9:42579413-42586534	3	-	42579413	42579413	789624	3	629,86,2899,	0,3852,4222,
#Partially deleted in new
chr9	42625435	42626813	chr9:42625435-42626813	7	+	42625435	42625435	16724991	2	98,193,	0,1185,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	42636787	42637139	chr9:42636787-42637139	7	-	42636787	42636787	16724991	1	352,	0,
#Partially deleted in new
chr9	42667505	42668887	chr9:42667505-42668887	7	-	42667505	42667505	16724991	2	190,105,	0,1277,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	42707799	42714539	chr9:42707799-42714539	3	+	42707799	42707799	8553170	3	2898,88,238,	0,3180,6502,
#Partially deleted in new
chr9	42795391	42800672	chr9:42795391-42800672	7	+	42795391	42795391	16724991	5	1397,42,60,85,75,	0,2615,2746,3465,5206,
#Partially deleted in new
chr9	42817104	42823213	chr9:42817104-42823213	7	-	42817104	42817104	16724991	4	154,304,166,463,	0,3651,4458,5646,
#Partially deleted in new
chr9	42852674	42894751	chr9:42852674-42894751	7	+	42852674	42852674	16724991	15	203,115,174,108,135,56,31,70,85,29,73,71,164,181,919,	0,3523,3800,7861,9009,11735,18328,21046,25058,27955,28075,34103,38231,39810,41158,
#Deleted in new
chr9	42863199	42863306	chr9:42863199-42863306	3	+	42863199	42863199	8553170	1	107,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	42901237	42920095	chr9:42901237-42920095	7	+	42901237	42901237	16724991	8	118,130,282,212,223,50,276,408,	0,2105,9494,10366,12496,16129,17345,18450,
#Deleted in new
chr9	42921442	42921670	chr9:42921442-42921670	7	-	42921442	42921442	16724991	1	228,	0,
#Deleted in new
chr9	42923276	42924144	chr9:42923276-42924144	7	+	42923276	42923276	16724991	1	868,	0,
#Deleted in new
chr9	42950565	42951630	chr9:42950565-42951630	7	+	42950565	42950565	16724991	3	269,70,210,	0,596,855,
#Deleted in new
chr9	42959279	42960066	chr9:42959279-42960066	7	-	42959279	42959279	16724991	1	787,	0,
#Deleted in new
chr9	42972385	42973289	chr9:42972385-42973289	7	-	42972385	42972385	16724991	1	904,	0,
#Deleted in new
chr9	42974854	42976043	chr9:42974854-42976043	5	+	42974854	42974854	16724991	1	1189,	0,
#Deleted in new
chr9	42975895	42978320	chr9:42975895-42978320	7	+	42975895	42975895	16724991	2	512,77,	0,2348,
#Deleted in new
chr9	42978850	42979918	chr9:42978850-42979918	3	+	42978850	42978850	8553170	2	130,405,	0,663,
#Partially deleted in new
chr9	42981771	42988167	chr9:42981771-42988167	3	+	42981771	42981771	8553170	2	798,1449,	0,4947,
#Partially deleted in new
chr9	43109865	43125905	chr9:43109865-43125905	7	-	43109865	43109865	16724991	7	286,219,119,138,124,130,26,	0,644,1073,1400,1966,9691,16014,
#Deleted in new
chr9	60546919	60547154	chr9:60546919-60547154	7	-	60546919	60546919	16724991	1	235,	0,
#Partially deleted in new
chr9	60914373	60920650	chr9:60914373-60920650	3	+	60914435	60920500	789624	4	251,58,61,3886,	0,1449,2075,2391,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	60918580	60927822	chr9:60918580-60927822	7	-	60918580	60918580	16724991	2	1361,627,	0,8615,
#Deleted in new
chr9	60927097	60927491	chr9:60927097-60927491	5	-	60927097	60927097	16724991	1	394,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	60929773	60936746	chr9:60929773-60936746	7	+	60929773	60929773	16724991	2	622,1096,	0,5877,
#Deleted in new
chr9	60929926	60930407	chr9:60929926-60930407	5	+	60929926	60929926	16724991	1	481,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	60943310	60964132	chr9:60943310-60964132	3	-	60943310	60943310	8553170	3	101,107,291,	0,906,20531,
#Deleted in new
chr9	60944554	60944636	chr9:60944554-60944636	7	-	60944554	60944554	16724991	1	82,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	60955251	60956486	chr9:60955251-60956486	1	-	60955251	60955251	8553170	2	355,63,	0,1172,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	60955482	60964185	chr9:60955482-60964185	1	-	60955482	60955482	8553170	2	124,344,	0,8359,
#Partially deleted in new
chr9	61063751	61113954	chr9:61063751-61113954	7	-	61063751	61063751	16724991	9	240,219,171,128,157,204,120,107,172,	0,2582,3821,9237,18138,33084,40707,44468,50031,
#Partially deleted in new
chr9	61190002	61196280	chr9:61190002-61196280	3	+	61190064	61196130	789624	4	251,58,61,3886,	0,1450,2076,2392,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	61190036	61191325	chr9:61190036-61191325	0	+	61190036	61190036	8553170	2	217,367,	0,922,
#Partially deleted in new
chr9	61190742	61192790	chr9:61190742-61192790	0	+	61190742	61190742	8553170	4	40,58,61,396,	0,710,1336,1652,
#Deleted in new
chr9	61191327	61192828	chr9:61191327-61192828	0	+	61191327	61191327	8553170	3	183,61,434,	0,751,1067,
#Deleted in new
chr9	61191644	61192801	chr9:61191644-61192801	0	+	61191644	61191644	8553170	3	64,61,407,	0,434,750,
#Deleted in new
chr9	61191644	61192647	chr9:61191644-61192647	0	+	61191644	61191644	8553170	3	201,61,253,	0,434,750,
#Deleted in new
chr9	61191644	61192839	chr9:61191644-61192839	0	+	61191644	61191644	8553170	3	26,61,445,	0,434,750,
#Deleted in new
chr9	61191655	61193011	chr9:61191655-61193011	0	+	61191655	61191655	8553170	3	98,61,617,	0,423,739,
#Deleted in new
chr9	61191734	61193975	chr9:61191734-61193975	0	+	61191734	61191734	8553170	4	111,61,62,155,	0,344,660,2086,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	61194210	61203446	chr9:61194210-61203446	3	-	61194210	61194210	8553170	2	1361,627,	0,8609,
#Deleted in new
chr9	61202717	61203087	chr9:61202717-61203087	7	-	61202717	61202717	16724991	1	370,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	61205257	61212373	chr9:61205257-61212373	7	+	61205257	61205257	16724991	2	762,1100,	0,6016,
#Deleted in new
chr9	61205560	61206029	chr9:61205560-61206029	5	+	61205560	61205560	16724991	1	469,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	61229912	61231863	chr9:61229912-61231863	3	-	61229912	61229912	8553170	2	1063,63,	0,1888,
#Partially deleted in new
chr9	61330716	61453030	chr9:61330716-61453030	3	+	61330967	61453030	789624	9	336,111,194,148,204,185,144,262,144,	0,21297,49158,94985,109888,110746,112156,116621,122170,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	61427616	61427877	chr9:61427616-61427877	3	-	61427616	61427616	8553170	1	261,	0,
#Partially deleted in new
chr9	61581812	61582675	chr9:61581812-61582675	7	+	61581812	61581812	16724991	2	136,96,	0,767,
#Partially deleted in new
chr9	61615875	61627683	chr9:61615875-61627683	3	+	61615875	61615875	8553170	4	132,152,299,135,	0,4374,10794,11673,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	61642382	61642494	chr9:61642382-61642494	3	+	61642382	61642382	8553170	1	112,	0,
#Deleted in new
chr9	61659732	61662690	chr9:61659732-61662690	3	+	61659732	61659732	8553170	3	185,115,606,	0,1455,2352,
#Deleted in new
chr9	61661096	61662606	chr9:61661096-61662606	0	+	61661096	61661096	8553170	2	206,522,	0,988,
#Deleted in new
chr9	61665578	61666386	chr9:61665578-61666386	7	+	61665578	61665578	16724991	2	76,208,	0,600,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	61789142	61789426	chr9:61789142-61789426	3	+	61789142	61789142	8553170	1	284,	0,
#Deleted in new
chr9	61854161	61855331	chr9:61854161-61855331	3	+	61854161	61854161	789624	2	215,401,	0,769,
#Deleted in new
chr9	61858709	61858908	chr9:61858709-61858908	7	+	61858709	61858709	16724991	1	199,	0,
#Deleted in new
chr9	61861852	61862567	chr9:61861852-61862567	7	-	61861852	61861852	16724991	2	124,76,	0,639,
#Deleted in new
chr9	61861994	61862336	chr9:61861994-61862336	7	+	61861994	61861994	16724991	1	342,	0,
#Deleted in new
chr9	61865754	61866965	chr9:61865754-61866965	3	-	61865754	61865754	8553170	2	323,116,	0,1095,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	61868726	61887084	chr9:61868726-61887084	3	+	61868726	61868726	8553170	2	48,444,	0,17914,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	61883639	61883751	chr9:61883639-61883751	3	-	61883639	61883639	8553170	1	112,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	61898804	61910993	chr9:61898804-61910993	3	-	61898804	61898804	8553170	4	135,299,152,133,	0,715,7599,12056,
#Partially deleted in new
chr9	61906373	61910995	chr9:61906373-61910995	0	-	61906373	61906373	8553170	2	174,135,	0,4487,
#Partially deleted in new
chr9	61906376	61911022	chr9:61906376-61911022	0	-	61906376	61906376	8553170	2	179,162,	0,4484,
#Deleted in new
chr9	61912703	61913115	chr9:61912703-61913115	7	+	61912703	61912703	16724991	1	412,	0,
#Partially deleted in new
chr9	61944231	61945136	chr9:61944231-61945136	7	-	61944231	61944231	16724991	2	92,127,	0,778,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	61972239	61976380	chr9:61972239-61976380	3	+	61972239	61972239	8553170	3	431,122,378,	0,3551,3763,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	61972242	61973649	chr9:61972242-61973649	0	+	61972242	61972242	8553170	1	1407,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	61972268	61973679	chr9:61972268-61973679	1	+	61972268	61972268	8553170	2	402,177,	0,1234,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	61972428	61976315	chr9:61972428-61976315	1	+	61972428	61972428	8553170	4	135,177,122,313,	0,1074,3362,3574,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	61982795	61986934	chr9:61982795-61986934	3	+	61982795	61982795	8553170	1	4139,	0,
#Partially deleted in new
chr9	62028425	62076349	chr9:62028425-62076349	3	+	62028425	62028425	8553170	3	102,111,678,	0,44574,47246,
#Deleted in new
chr9	62266318	62266919	chr9:62266318-62266919	7	+	62266318	62266318	16724991	1	601,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	62349940	62351292	chr9:62349940-62351292	1	-	62349940	62349940	8553170	3	307,90,146,	0,529,1206,
#Partially deleted in new
chr9	62350142	62351536	chr9:62350142-62351536	3	-	62350142	62350142	8553170	2	105,390,	0,1004,
#Deleted in new
chr9	62357833	62358140	chr9:62357833-62358140	7	-	62357833	62357833	16724991	1	307,	0,
#Deleted in new
chr9	62358190	62358285	chr9:62358190-62358285	3	-	62358190	62358190	8553170	1	95,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	62363580	62363864	chr9:62363580-62363864	3	+	62363580	62363580	8553170	1	284,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	62374127	62376783	chr9:62374127-62376783	0	-	62374127	62374127	8553170	2	2255,286,	0,2370,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	62374461	62376780	chr9:62374461-62376780	3	-	62374461	62374461	8553170	3	1067,130,283,	0,1791,2036,
#Deleted in new
chr9	62375327	62376126	chr9:62375327-62376126	1	-	62375327	62375327	8553170	2	201,55,	0,744,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	62375331	62376836	chr9:62375331-62376836	1	-	62375331	62375331	8553170	2	197,584,	0,921,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	62376160	62435199	chr9:62376160-62435199	7	+	62376160	62376160	16724991	3	653,104,1133,	0,56715,57906,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	62376516	62434385	chr9:62376516-62434385	4	+	62376516	62376516	16724991	2	297,1510,	0,56359,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	62387170	62394004	chr9:62387170-62394004	3	-	62387170	62387170	8553170	3	340,86,2899,	0,3565,3935,
#Deleted in new
chr9	62395369	62395678	chr9:62395369-62395678	7	-	62395369	62395369	16724991	1	309,	0,
#Partially deleted in new
chr9	62432875	62434255	chr9:62432875-62434255	5	+	62432875	62432875	16724991	2	104,189,	0,1191,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	62444255	62444634	chr9:62444255-62444634	7	-	62444255	62444255	16724991	1	379,	0,
#Partially deleted in new
chr9	62474947	62476333	chr9:62474947-62476333	7	-	62474947	62474947	16724991	2	123,104,	0,1282,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	62515190	62522018	chr9:62515190-62522018	3	+	62515190	62515190	8553170	3	2895,86,340,	0,3179,6488,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	62532336	62534724	chr9:62532336-62534724	1	+	62532336	62532336	8553170	3	352,130,1067,	0,466,1321,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	62532363	62534722	chr9:62532363-62534722	3	+	62532363	62532363	8553170	2	325,1920,	0,439,
#Deleted in new
chr9	62532396	62532853	chr9:62532396-62532853	7	-	62532396	62532396	16724991	1	457,	0,
#Deleted in new
chr9	62533057	62533858	chr9:62533057-62533858	0	+	62533057	62533057	8553170	2	56,201,	0,600,
#Partially deleted in new
chr9	62559838	62569907	chr9:62559838-62569907	7	+	62559838	62559838	16724991	6	205,235,168,69,127,84,	0,3997,6220,7424,8997,9985,
#Deleted in new
chr9	62601225	62602672	chr9:62601225-62602672	7	+	62601225	62601225	16724991	1	1447,	0,
#Partially deleted in new
chr9	62606796	62607748	chr9:62606796-62607748	7	-	62606796	62606796	16724991	2	334,307,	0,645,
#Deleted in new
chr9	62609724	62610799	chr9:62609724-62610799	7	-	62609724	62609724	16724991	1	1075,	0,
#Partially deleted in new
chr9	62686911	62688190	chr9:62686911-62688190	7	+	62686911	62686911	16724991	1	1279,	0,
#Deleted in new
chr9	62690032	62690534	chr9:62690032-62690534	7	+	62690032	62690032	16724991	1	502,	0,
#Partially deleted in new
chr9	62710035	62711398	chr9:62710035-62711398	7	-	62710035	62710035	16724991	1	1363,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	62801460	62810186	chr9:62801460-62810186	0	+	62801460	62801460	8553170	3	71,157,419,	0,2523,8307,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	62801464	62813486	chr9:62801464-62813486	3	+	62801464	62801464	789624	5	67,157,1822,137,694,	0,2519,8303,10474,11328,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	62802075	62806333	chr9:62802075-62806333	0	+	62802075	62802075	8553170	3	134,157,23,	0,1908,4235,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	62802319	62802438	chr9:62802319-62802438	7	-	62802319	62802319	16724991	1	119,	0,
#Deleted in new
chr9	62837138	62838302	chr9:62837138-62838302	3	-	62837138	62837138	8553170	1	1164,	0,
#Partially deleted in new
chr9	62838823	62844276	chr9:62838823-62844276	7	+	62838823	62838823	16724991	2	54,472,	0,4981,
#Deleted in new
chr9	62843918	62844170	chr9:62843918-62844170	5	+	62843918	62843918	16724991	1	252,	0,
#Deleted in new
chr9	62844817	62845184	chr9:62844817-62845184	7	+	62844817	62844817	16724991	1	367,	0,
#Partially deleted in new
chr9	62856998	62869300	chr9:62856998-62869300	1	-	62856998	62856998	8553170	3	1185,144,111,	0,9968,12191,
#Deleted in new
chr9	62857207	62858484	chr9:62857207-62858484	7	+	62857207	62857207	16724991	1	1277,	0,
#Partially deleted in new
chr9	62857832	62897707	chr9:62857832-62897707	3	-	62857832	62857832	789624	6	351,122,144,180,115,179,	0,1239,9134,9864,11357,39696,
#Deleted in new
chr9	62860872	62862007	chr9:62860872-62862007	5	-	62860872	62860872	16724991	1	1135,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	62861381	62864957	chr9:62861381-62864957	7	-	62861381	62861381	16724991	2	812,168,	0,3408,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	62865596	62898087	chr9:62865596-62898087	1	-	62865596	62865596	8553170	5	137,144,537,115,669,	0,1370,2100,3593,31822,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	62867707	62876614	chr9:62867707-62876614	1	-	62867707	62867707	8553170	4	526,115,325,65,	0,1482,5659,8842,
#Partially deleted in new
chr9	62868138	62897777	chr9:62868138-62897777	0	-	62868138	62868138	8553170	3	95,115,249,	0,1051,29390,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	62868196	62869868	chr9:62868196-62869868	0	-	62868196	62868196	8553170	2	37,679,	0,993,
#Partially deleted in new
chr9	62873592	62880620	chr9:62873592-62880620	1	-	62873592	62873592	8553170	3	99,280,98,	0,3556,6930,
#Partially deleted in new
chr9	62888534	62889921	chr9:62888534-62889921	7	+	62888534	62888534	16724991	2	104,188,	0,1199,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	62897448	62900104	chr9:62897448-62900104	3	+	62897448	62897448	789624	2	286,2255,	0,401,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	62897451	62899770	chr9:62897451-62899770	1	+	62897451	62897451	8553170	3	283,130,1067,	0,398,1252,
#Deleted in new
chr9	62898105	62898904	chr9:62898105-62898904	0	+	62898105	62898105	8553170	2	55,201,	0,598,
#Partially deleted in new
chr9	62924910	62934964	chr9:62924910-62934964	7	+	62924910	62924910	16724991	6	209,236,170,76,127,88,	0,3982,6201,7400,8979,9966,
#Deleted in new
chr9	63025596	63025993	chr9:63025596-63025993	7	+	63025596	63025596	16724991	1	397,	0,
#Partially deleted in new
chr9	63055640	63059217	chr9:63055640-63059217	7	+	63055640	63055640	16724991	6	198,181,59,123,148,176,	0,282,709,1874,2911,3401,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	63111254	63127100	chr9:63111254-63127100	5	-	63111254	63111254	16724991	4	2838,153,108,640,	0,10436,12930,15206,
#Partially deleted in new
chr9	63112427	63126010	chr9:63112427-63126010	4	-	63112427	63112427	16724991	4	1665,153,108,103,	0,9263,11757,13480,
#Partially deleted in new
chr9	63112427	63125886	chr9:63112427-63125886	4	-	63112427	63112427	16724991	5	1665,153,108,99,173,	0,9263,11757,12741,13286,
#Partially deleted in new
chr9	63112427	63125765	chr9:63112427-63125765	4	-	63112427	63112427	16724991	5	1665,108,153,108,52,	0,4536,9263,11757,13286,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	63113777	63124931	chr9:63113777-63124931	4	-	63113777	63113777	16724991	4	315,153,108,296,	0,7913,10407,10858,
#Partially deleted in new
chr9	63113939	63122371	chr9:63113939-63122371	6	-	63113939	63113939	16724991	2	153,681,	0,7751,
#Partially deleted in new
chr9	63121690	63124292	chr9:63121690-63124292	5	-	63121690	63121690	16724991	2	153,108,	0,2494,
#Partially deleted in new
chr9	63127358	63143401	chr9:63127358-63143401	7	+	63127358	63127358	16724991	7	25,132,124,138,119,218,286,	0,6237,13955,14506,14852,15181,15757,
#Partially deleted in new
chr9	63317066	63333091	chr9:63317066-63333091	7	-	63317066	63317066	16724991	7	285,223,119,138,124,130,26,	0,643,1076,1403,1968,9663,15999,
#Partially deleted in new
chr9	63330325	63338755	chr9:63330325-63338755	5	+	63330325	63330325	16724991	3	63,123,162,	0,5807,8268,
#Partially deleted in new
chr9	63334597	63343660	chr9:63334597-63343660	7	+	63334597	63334597	16724991	5	137,103,108,153,285,	0,579,1550,3999,8778,
#Partially deleted in new
chr9	63372802	63380011	chr9:63372802-63380011	5	-	63372802	63372802	16724991	8	176,148,123,59,181,189,172,72,	0,518,1580,2810,3115,3380,6320,7137,
#Deleted in new
chr9	63581253	63581834	chr9:63581253-63581834	7	-	63581253	63581253	16724991	1	581,	0,
#Deleted in new
chr9	63703064	63703755	chr9:63703064-63703755	7	+	63703064	63703064	16724991	1	691,	0,
#Deleted in new
chr9	63719863	63720441	chr9:63719863-63720441	7	+	63719863	63719863	16724991	1	578,	0,
#Partially deleted in new
chr9	63728876	63744910	chr9:63728876-63744910	3	+	63728876	63728876	8553170	3	123,97,127,	0,15582,15907,
#Deleted in new
chr9	63729701	63730173	chr9:63729701-63730173	7	+	63729701	63729701	16724991	1	472,	0,
#Deleted in new
chr9	63761545	63762824	chr9:63761545-63762824	7	-	63761545	63761545	16724991	1	1279,	0,
#Deleted in new
chr9	63774869	63775241	chr9:63774869-63775241	7	-	63774869	63774869	16724991	1	372,	0,
#Deleted in new
chr9	63775891	63776143	chr9:63775891-63776143	7	-	63775891	63775891	16724991	1	252,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	63802143	63814159	chr9:63802143-63814159	3	-	63802143	63802143	8553170	5	696,137,1821,157,67,	0,1413,1897,9347,11949,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	63804783	63812877	chr9:63804783-63812877	0	-	63804783	63804783	8553170	3	1078,157,350,	0,6707,7744,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	63813189	63813307	chr9:63813189-63813307	7	+	63813189	63813189	16724991	1	118,	0,
#Deleted in new
chr9	63817747	63818462	chr9:63817747-63818462	7	-	63817747	63817747	16724991	1	715,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	63819573	63819654	chr9:63819573-63819654	3	+	63819573	63819573	5263520	1	81,	0,
#Partially deleted in new
chr9	63832126	63859641	chr9:63832126-63859641	7	-	63832126	63832126	16724991	9	34,110,92,102,123,58,126,69,217,	0,1212,2309,5604,7956,9858,10697,25073,27298,
#Partially deleted in new
chr9	63974761	64004155	chr9:63974761-64004155	7	-	63974761	63974761	16724991	7	52,57,45,87,47,38,60,	0,11465,17383,20052,21823,27765,29334,
#Deleted in new
chr9	64082428	64082534	chr9:64082428-64082534	3	+	64082428	64082428	8553170	1	106,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	64343043	64362584	chr9:64343043-64362584	3	+	64343043	64343043	8553170	8	248,153,61,424,146,75,152,276,	0,8075,12182,14519,15068,16620,17305,19265,
#Partially deleted in new
chr9	64369393	64413142	chr9:64369393-64413142	3	+	64369674	64411758	789624	15	484,115,174,107,138,56,31,70,85,29,73,71,164,181,2359,	0,3793,4070,8127,9280,12010,18610,21323,25344,28163,28283,34323,38451,40041,41390,
#Partially deleted in new
chr9	64369410	64388118	chr9:64369410-64388118	0	+	64369410	64369410	8553170	8	467,226,115,174,107,138,56,115,	0,1306,3776,4053,8110,9263,11993,18593,
#Partially deleted in new
chr9	64369594	64373700	chr9:64369594-64373700	1	+	64369674	64373689	789624	2	283,237,	0,3869,
#Deleted in new
chr9	64380193	64380300	chr9:64380193-64380300	3	+	64380193	64380193	8553170	1	107,	0,
#Deleted in new
chr9	64439345	64440180	chr9:64439345-64440180	7	+	64439345	64439345	16724991	1	835,	0,
#Deleted in new
chr9	64462818	64463196	chr9:64462818-64463196	7	+	64462818	64462818	16724991	1	378,	0,
#Deleted in new
chr9	64465462	64466498	chr9:64465462-64466498	7	+	64465462	64465462	16724991	3	296,70,154,	0,623,882,
#Deleted in new
chr9	64473039	64473826	chr9:64473039-64473826	7	-	64473039	64473039	16724991	1	787,	0,
#Deleted in new
chr9	64486163	64487069	chr9:64486163-64487069	7	-	64486163	64486163	16724991	1	906,	0,
#Deleted in new
chr9	64488599	64489786	chr9:64488599-64489786	7	+	64488599	64488599	16724991	1	1187,	0,
#Deleted in new
chr9	64498516	64498745	chr9:64498516-64498745	7	+	64498516	64498516	16724991	1	229,	0,
#Partially deleted in new
chr9	64621559	64637586	chr9:64621559-64637586	7	-	64621559	64621559	16724991	7	285,219,119,138,124,130,26,	0,643,1072,1399,1964,9670,16001,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	64637844	64652556	chr9:64637844-64652556	7	+	64637844	64637844	16724991	4	648,108,153,1690,	0,2809,5258,13022,
#Partially deleted in new
chr9	64640638	64643300	chr9:64640638-64643300	5	+	64640638	64640638	16724991	2	123,201,	0,2461,
#Partially deleted in new
chr9	64705733	64709311	chr9:64705733-64709311	7	-	64705733	64705733	16724991	6	176,148,123,59,181,198,	0,518,1580,2810,3115,3380,
#Deleted in new
chr9	64737402	64737755	chr9:64737402-64737755	7	-	64737402	64737402	16724991	1	353,	0,
#Deleted in new
chr9	64765053	64765535	chr9:64765053-64765535	7	-	64765053	64765053	16724991	2	298,52,	0,430,
#Deleted in new
chr9	64810864	64811429	chr9:64810864-64811429	7	-	64810864	64810864	16724991	1	565,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	64817869	64836341	chr9:64817869-64836341	7	+	64817869	64817869	16724991	5	61,67,130,49,2968,	0,644,4341,15279,15504,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	64878789	64889063	chr9:64878789-64889063	7	-	64878789	64878789	16724991	5	371,230,219,115,468,	0,2858,5233,5614,9806,
#Deleted in new
chr9	64880368	64880475	chr9:64880368-64880475	3	-	64880368	64880368	8553170	1	107,	0,
#Partially deleted in new
chr9	65189994	65193610	chr9:65189994-65193610	7	-	65189994	65189994	16724991	5	176,148,123,140,119,	0,518,1580,3155,3497,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	65219986	65230861	chr9:65219986-65230861	7	-	65219986	65219986	16724991	5	489,137,404,151,82,	0,980,2872,3528,10793,
#Deleted in new
chr9	65222521	65222777	chr9:65222521-65222777	7	-	65222521	65222521	16724991	1	256,	0,
#Deleted in new
chr9	65222879	65223260	chr9:65222879-65223260	5	-	65222879	65222879	16724991	1	381,	0,
#Deleted in new
chr9	65250542	65250826	chr9:65250542-65250826	7	-	65250542	65250542	16724991	1	284,	0,
#Deleted in new
chr9	65282100	65285209	chr9:65282100-65285209	3	-	65283126	65284377	789624	1	3109,	0,
#Partially deleted in new
chr9	65287913	65323015	chr9:65287913-65323015	7	-	65287913	65287913	16724991	9	102,130,66,69,52,57,45,87,47,	0,489,1744,1913,13511,24657,30602,33279,35055,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	65573383	65573495	chr9:65573383-65573495	3	+	65573383	65573383	8553170	1	112,	0,
#Partially deleted in new
chr9	65646981	65652679	chr9:65646981-65652679	7	-	65646981	65646981	16724991	4	37,110,89,105,	0,1214,2302,5593,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	65668804	65681662	chr9:65668804-65681662	0	+	65668804	65668804	8553170	4	267,98,87,89,	0,8323,10361,12769,
#Partially deleted in new
chr9	65675798	65734041	chr9:65675798-65734041	3	+	65675976	65733616	789624	15	332,87,97,92,60,38,47,87,45,57,52,69,66,130,532,	0,3367,5775,6967,15168,16772,22716,24452,27171,33103,44242,55831,56003,57194,57711,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr9	65675833	65734040	chr9:65675833-65734040	1	+	65708851	65733616	789624	17	297,87,97,92,60,38,88,47,87,45,258,819,52,69,66,130,531,	0,3332,5740,6932,15133,16737,17552,22681,24417,27136,28497,32306,44207,55796,55968,57159,57676,
#Partially deleted in new
chr9	65675836	65733673	chr9:65675836-65733673	0	+	65675976	65677150	789624	16	294,98,87,97,92,60,38,47,87,45,57,52,69,66,130,164,	0,1291,3329,5737,6929,15130,16734,22678,24414,27133,33065,44204,55793,55965,57156,57673,
#Partially deleted in new
chr9	65675857	65703471	chr9:65675857-65703471	0	+	65675976	65677150	789624	10	273,98,87,97,92,60,38,47,87,502,	0,1270,3308,5716,6908,15109,16713,22657,24393,27112,
#Partially deleted in new
chr9	65675874	65682026	chr9:65675874-65682026	0	+	65675874	65675874	789624	4	256,98,87,453,	0,1253,3291,5699,
#Partially deleted in new
chr9	65675874	65682577	chr9:65675874-65682577	1	+	65675976	65681674	789624	3	256,87,1004,	0,3291,5699,
#Partially deleted in new
chr9	65675893	65732393	chr9:65675893-65732393	0	+	65675976	65693400	789624	14	237,87,97,92,60,38,88,47,87,45,57,52,69,592,	0,3272,5680,6872,15073,16677,17492,22621,24357,27076,33008,44147,55736,55908,
#Partially deleted in new
chr9	65675895	65733670	chr9:65675895-65733670	0	+	65675976	65693400	789624	16	235,87,97,92,60,38,88,47,87,45,57,52,69,66,130,161,	0,3270,5678,6870,15071,16675,17490,22619,24355,27074,33006,44145,55734,55906,57097,57614,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr9	65675905	65733859	chr9:65675905-65733859	0	+	65675976	65693400	789624	15	225,87,97,92,38,88,47,45,140,57,52,69,66,130,350,	0,3260,5668,6860,16665,17480,22609,27064,31107,32996,44135,55724,55896,57087,57604,
#Partially deleted in new
chr9	65675923	65733674	chr9:65675923-65733674	1	+	65675976	65733616	789624	14	207,87,97,92,60,38,47,87,45,52,69,66,130,165,	0,3242,5650,6842,15043,16647,22591,24327,27046,44117,55706,55878,57069,57586,
#Deleted in new
chr9	65675924	65679544	chr9:65675924-65679544	0	+	65675924	65675924	8553170	2	206,379,	0,3241,
#Partially deleted in new
chr9	65675927	65733673	chr9:65675927-65733673	1	+	65675976	65733616	789624	14	203,87,97,92,38,47,87,45,57,52,69,66,130,164,	0,3238,5646,6838,16643,22587,24323,27042,32974,44113,55702,55874,57065,57582,
#Partially deleted in new
chr9	65675929	65732241	chr9:65675929-65732241	0	+	65675976	65677150	789624	13	201,98,87,97,92,60,38,47,87,45,52,69,440,	0,1198,3236,5644,6836,15037,16641,22585,24321,27040,44111,55700,55872,
#Partially deleted in new
chr9	65675929	65733672	chr9:65675929-65733672	0	+	65675976	65694925	789624	16	201,87,97,92,60,38,145,47,87,45,57,52,69,66,130,163,	0,3236,5644,6836,15037,16641,18975,22585,24321,27040,32972,44111,55700,55872,57063,57580,
#Partially deleted in new
chr9	65675937	65733676	chr9:65675937-65733676	1	+	65675976	65733616	789624	13	193,87,97,92,60,38,47,45,52,69,66,130,167,	0,3228,5636,6828,15029,16633,22577,27032,44103,55692,55864,57055,57572,
#Deleted in new
chr9	65675940	65679212	chr9:65675940-65679212	0	+	65675940	65675940	8553170	3	190,102,47,	0,1187,3225,
#Partially deleted in new
chr9	65675986	65701415	chr9:65675986-65701415	0	+	65675986	65675986	8553170	8	144,87,97,92,60,38,47,1165,	0,3179,5587,6779,14980,16584,22528,24264,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	65681573	65683342	chr9:65681573-65683342	0	+	65681573	65681573	8553170	2	97,577,	0,1192,
#Partially deleted in new
chr9	65681614	65703014	chr9:65681614-65703014	0	+	65681614	65681614	8553170	8	56,92,46,38,88,47,87,45,	0,1151,8941,10956,11771,16900,18636,21355,
#Partially deleted in new
chr9	65688400	65733673	chr9:65688400-65733673	0	+	65688400	65688400	8553170	15	621,60,38,88,140,47,87,45,217,57,52,69,66,130,164,	0,2566,4170,4985,6504,10114,11850,14569,15930,20501,31640,43229,43401,44592,45109,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	65690966	65704923	chr9:65690966-65704923	0	+	65690966	65690966	8553170	5	60,38,88,47,1954,	0,1604,2419,7548,12003,
#Partially deleted in new
chr9	65690966	65708958	chr9:65690966-65708958	0	+	65690966	65690966	8553170	8	60,38,145,47,87,45,84,57,	0,1604,3938,7548,9284,12003,13364,17935,
#Partially deleted in new
chr9	65693385	65701108	chr9:65693385-65701108	0	+	65693385	65693385	8553170	3	88,47,858,	0,5129,6865,
#Partially deleted in new
chr9	65693392	65703303	chr9:65693392-65703303	0	+	65693392	65693392	8553170	4	81,47,87,334,	0,5122,6858,9577,
#Partially deleted in new
chr9	65700286	65733671	chr9:65700286-65733671	0	+	65700286	65733616	789624	7	51,57,52,69,66,130,162,	0,8615,19754,31343,31515,32706,33223,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	65706432	65733992	chr9:65706432-65733992	0	+	65706432	65706432	8553170	6	2526,52,69,66,130,483,	0,13608,25197,25369,26560,27077,
#Partially deleted in new
chr9	65708905	65733580	chr9:65708905-65733580	0	+	65708905	65708905	8553170	6	53,52,69,66,176,71,	0,11135,22724,22896,24041,24604,
#Partially deleted in new
chr9	65719384	65733994	chr9:65719384-65733994	0	+	65719384	65719384	8553170	3	708,69,2193,	0,12245,12417,
#Partially deleted in new
chr9	65719954	65733671	chr9:65719954-65733671	0	+	65719954	65719954	8553170	4	138,66,130,162,	0,11847,13038,13555,
#Partially deleted in new
chr9	65723083	65733647	chr9:65723083-65733647	0	+	65723083	65723083	8553170	5	46,69,66,130,138,	0,8546,8718,9909,10426,
#Deleted in new
chr9	65731335	65733672	chr9:65731335-65733672	0	+	65731335	65731335	8553170	4	363,66,130,163,	0,466,1657,2174,
#Deleted in new
chr9	65732692	65733674	chr9:65732692-65733674	0	+	65732692	65732692	8553170	2	430,165,	0,817,
#Deleted in new
chr9	65736554	65738784	chr9:65736554-65738784	3	+	65737145	65738396	789624	1	2230,	0,
#Deleted in new
chr9	65770954	65771434	chr9:65770954-65771434	7	+	65770954	65770954	16724991	2	50,298,	0,182,
#Deleted in new
chr9	65798725	65799124	chr9:65798725-65799124	7	+	65798725	65798725	16724991	1	399,	0,
#Deleted in new
chr9	65816931	65817472	chr9:65816931-65817472	7	-	65816931	65816931	16724991	1	541,	0,
#Partially deleted in new
chr9	65828119	65831696	chr9:65828119-65831696	7	+	65828119	65828119	16724991	6	198,181,59,123,148,176,	0,282,709,1874,2911,3401,
#Partially deleted in new
chr9	65865189	65877274	chr9:65865189-65877274	7	-	65865189	65865189	16724991	6	292,108,153,108,103,156,	0,3181,7908,10402,11384,11929,
#Partially deleted in new
chr9	65873097	65875699	chr9:65873097-65875699	5	-	65873097	65873097	16724991	2	153,108,	0,2494,
#Partially deleted in new
chr9	65878765	65894790	chr9:65878765-65894790	7	+	65878765	65878765	16724991	7	26,130,124,138,119,218,286,	0,6225,13937,14488,14834,15163,15739,
#Partially deleted in new
chr9	66014524	66020816	chr9:66014524-66020816	3	-	66014524	66014524	8553170	2	1453,801,	0,5491,
#Deleted in new
chr9	66017642	66017868	chr9:66017642-66017868	7	-	66017642	66017642	16724991	1	226,	0,
#Deleted in new
chr9	66022660	66024338	chr9:66022660-66024338	7	-	66022660	66022660	16724991	3	402,130,109,	0,935,1569,
#Deleted in new
chr9	66024255	66026675	chr9:66024255-66026675	4	-	66024255	66024255	16724991	2	77,512,	0,1908,
#Deleted in new
chr9	66026527	66027719	chr9:66026527-66027719	5	-	66026527	66026527	16724991	1	1192,	0,
#Deleted in new
chr9	66029263	66030169	chr9:66029263-66030169	7	+	66029263	66029263	16724991	1	906,	0,
#Partially deleted in new
chr9	66042645	66043342	chr9:66042645-66043342	7	+	66042645	66042645	16724991	1	697,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	66047083	66051775	chr9:66047083-66051775	0	-	66047083	66047083	8553170	1	4692,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	66047112	66050907	chr9:66047112-66050907	0	-	66047112	66047112	8553170	3	275,162,331,	0,2749,3464,
#Deleted in new
chr9	66082349	66083187	chr9:66082349-66083187	7	-	66082349	66082349	16724991	1	838,	0,
#Deleted in new
chr9	66084803	66085031	chr9:66084803-66085031	7	+	66084803	66084803	16724991	1	228,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	66106814	66113551	chr9:66106814-66113551	0	-	66106814	66106814	8553170	2	4934,633,	0,6104,
#Partially deleted in new
chr9	66109393	66152966	chr9:66109393-66152966	3	-	66110773	66152854	789624	15	2355,181,164,71,73,29,85,70,31,56,138,107,174,115,315,	0,3525,5133,9355,15401,15565,18302,22334,25090,31668,34321,35505,39495,39831,43258,
#Partially deleted in new
chr9	66113042	66118928	chr9:66113042-66118928	0	-	66113042	66113042	8553170	3	57,164,180,	0,1484,5706,
#Partially deleted in new
chr9	66113047	66131823	chr9:66113047-66131823	0	-	66113047	66113047	8553170	7	52,164,71,73,29,82,96,	0,1479,5701,11747,11911,14648,18680,
#Partially deleted in new
chr9	66134399	66153118	chr9:66134399-66153118	0	-	66151724	66152854	789624	8	115,56,138,107,174,115,226,467,	0,6662,9315,10499,14489,14825,17184,18252,
#Deleted in new
chr9	66142220	66142327	chr9:66142220-66142327	3	-	66142220	66142220	8553170	1	107,	0,
#Partially deleted in new
chr9	66148825	66153094	chr9:66148825-66153094	0	-	66148825	66148825	8553170	2	237,443,	0,3826,
#Partially deleted in new
chr9	66148825	66153135	chr9:66148825-66153135	0	-	66148825	66148825	8553170	3	237,115,484,	0,399,3826,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	66159953	66164904	chr9:66159953-66164904	1	-	66159953	66159953	789624	5	276,152,75,146,339,	0,2097,2859,4341,4612,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	66164523	66179430	chr9:66164523-66179430	3	-	66164523	66164523	8553170	3	466,224,145,	0,6683,14762,
#Partially deleted in new
chr9	66182325	66188451	chr9:66182325-66188451	7	+	66182325	66182325	16724991	4	465,174,301,155,	0,1472,2150,5971,
#Deleted in new
chr9	66204895	66208833	chr9:66204895-66208833	7	-	66204895	66204895	16724991	5	80,85,60,42,43,	0,1741,2485,2634,3895,
#Deleted in new
chr9	66253423	66254464	chr9:66253423-66254464	7	-	66253423	66253423	16724991	3	156,188,291,	0,422,750,
#Deleted in new
chr9	66635753	66637197	chr9:66635753-66637197	7	+	66635753	66635753	16724991	1	1444,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	66641313	66642277	chr9:66641313-66642277	7	-	66641313	66641313	16724991	2	349,316,	0,648,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	66721157	66722760	chr9:66721157-66722760	7	+	66721157	66721157	16724991	1	1603,	0,
#Deleted in new
chr9	66724583	66725064	chr9:66724583-66725064	7	+	66724583	66724583	16724991	1	481,	0,
#Partially deleted in new
chr9	66744560	66745929	chr9:66744560-66745929	7	-	66744560	66744560	16724991	1	1369,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	66856425	66919359	chr9:66856425-66919359	0	+	66903561	66919359	789624	5	36,216,127,96,1555,	0,46935,51812,52213,61379,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	66856425	66932141	chr9:66856425-66932141	0	+	66903561	66924283	789624	7	36,216,127,96,1554,116,117,	0,46935,51812,52213,61379,67796,75599,
#Deleted in new
chr9	66879453	66879940	chr9:66879453-66879940	7	-	66879453	66879453	16724991	1	487,	0,
#Partially deleted in new
chr9	66900728	66921439	chr9:66900728-66921439	3	+	66903561	66920746	789624	5	108,59,127,96,3635,	0,2789,7509,7910,17076,
#Partially deleted in new
chr9	66900736	66918141	chr9:66900736-66918141	0	+	66908330	66918141	789624	4	100,109,96,337,	0,7519,7902,17068,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	66900736	66917857	chr9:66900736-66917857	0	+	66903561	66917857	789624	6	100,149,59,127,96,53,	0,2172,2781,7501,7902,17068,
#Partially deleted in new
chr9	66900737	66921426	chr9:66900737-66921426	1	+	66903561	66920746	789624	5	99,216,127,96,3622,	0,2623,7500,7901,17067,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	66900812	66908734	chr9:66900812-66908734	0	+	66903561	66908734	789624	5	267,149,59,127,96,	0,2096,2705,7425,7826,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	66942702	66951405	chr9:66942702-66951405	3	+	66942702	66942702	8553170	2	344,124,	0,8579,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	66950393	66952344	chr9:66950393-66952344	1	+	66950393	66950393	8553170	2	63,1063,	0,888,
#Deleted in new
chr9	66962270	66962348	chr9:66962270-66962348	7	+	66962270	66962270	16724991	1	78,	0,
#Partially deleted in new
chr9	66976519	66976991	chr9:66976519-66976991	7	-	66976519	66976519	16724991	1	472,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	66979131	66988373	chr9:66979131-66988373	3	+	66979131	66979131	8553170	2	627,1361,	0,7881,
#Deleted in new
chr9	66979459	66979862	chr9:66979459-66979862	7	+	66979459	66979459	16724991	1	403,	0,
#Partially deleted in new
chr9	66986303	66992583	chr9:66986303-66992583	3	-	66986453	66992521	789624	4	3886,61,58,251,	0,4141,4770,6029,
#Partially deleted in new
chr9	67059559	67293468	chr9:67059559-67293468	7	+	67059559	67059559	16724991	24	84,111,194,148,204,185,144,262,144,172,107,120,204,157,128,171,219,240,225,134,88,231,72,117,	0,23132,50837,114300,129225,130078,131472,135956,141516,157633,163261,167009,174548,189541,198471,203844,205035,207596,219122,220916,221948,228904,229370,233792,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	67175774	67176035	chr9:67175774-67176035	3	-	67175774	67175774	8553170	1	261,	0,
#Partially deleted in new
chr9	67203634	67208072	chr9:67203634-67208072	7	-	67203634	67203634	16724991	4	466,89,124,265,	0,3088,3757,4173,
#Deleted in new
chr9	67211662	67213067	chr9:67211662-67213067	7	-	67211662	67211662	16724991	1	1405,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	67328206	67329404	chr9:67328206-67329404	7	-	67328206	67328206	16724991	1	1198,	0,
#Partially deleted in new
chr9	67512033	67515393	chr9:67512033-67515393	3	-	67512033	67512033	8553170	2	678,122,	0,3238,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	67697075	67697187	chr9:67697075-67697187	3	+	67697075	67697075	8553170	1	112,	0,
#Deleted in new
chr9	67713909	67713967	chr9:67713909-67713967	7	+	67713909	67713909	16724991	1	58,	0,
#Deleted in new
chr9	67714722	67714914	chr9:67714722-67714914	7	+	67714722	67714722	16724991	1	192,	0,
#Deleted in new
chr9	67717410	67719178	chr9:67717410-67719178	7	-	67717410	67717410	16724991	2	1564,29,	0,1739,
#Deleted in new
chr9	67718466	67718806	chr9:67718466-67718806	5	-	67718466	67718466	16724991	1	340,	0,
#Deleted in new
chr9	67718820	67719022	chr9:67718820-67719022	7	+	67718820	67718820	16724991	1	202,	0,
#Deleted in new
chr9	67721883	67722094	chr9:67721883-67722094	7	-	67721883	67721883	16724991	1	211,	0,
#Deleted in new
chr9	67722082	67722683	chr9:67722082-67722683	7	+	67722082	67722082	16724991	1	601,	0,
#Deleted in new
chr9	67723735	67724105	chr9:67723735-67724105	7	+	67723735	67723735	16724991	1	370,	0,
#Deleted in new
chr9	67725689	67725902	chr9:67725689-67725902	7	-	67725689	67725689	16724991	1	213,	0,
#Deleted in new
chr9	67725889	67726544	chr9:67725889-67726544	7	+	67725889	67725889	16724991	1	655,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	67791498	67791782	chr9:67791498-67791782	3	-	67791498	67791498	8553170	1	284,	0,
#Deleted in new
chr9	67797086	67797181	chr9:67797086-67797181	3	+	67797086	67797086	8553170	1	95,	0,
#Deleted in new
chr9	67797220	67797500	chr9:67797220-67797500	7	+	67797220	67797220	16724991	1	280,	0,
#Partially deleted in new
chr9	67859146	67902094	chr9:67859146-67902094	3	+	67859426	67901467	789624	15	483,115,174,107,138,56,31,70,85,29,73,71,164,181,1602,	0,3794,4071,8130,9282,12010,18613,21329,25339,28129,28249,34289,38412,40000,41346,
#Partially deleted in new
chr9	67859162	67877874	chr9:67859162-67877874	0	+	67859426	67860555	789624	8	467,226,115,174,107,138,56,115,	0,1308,3778,4055,8114,9266,11994,18597,
#Partially deleted in new
chr9	67859179	67863454	chr9:67859179-67863454	0	+	67859179	67859179	8553170	2	450,237,	0,4038,
#Partially deleted in new
chr9	67859346	67863454	chr9:67859346-67863454	0	+	67859346	67859346	8553170	3	283,115,237,	0,3594,3871,
#Partially deleted in new
chr9	67859397	67884550	chr9:67859397-67884550	0	+	67859426	67884550	789624	4	232,115,174,65,	0,3543,3820,25088,
#Deleted in new
chr9	67869946	67870053	chr9:67869946-67870053	3	+	67869946	67869946	8553170	1	107,	0,
#Partially deleted in new
chr9	67880449	67899198	chr9:67880449-67899198	0	+	67880449	67880449	8553170	7	96,82,29,73,71,164,52,	0,4039,6826,6946,12986,17109,18697,
#Partially deleted in new
chr9	67893326	67899203	chr9:67893326-67899203	0	+	67893326	67893326	8553170	3	180,164,57,	0,4232,5820,
#Partially deleted in new
chr9	67901098	67920552	chr9:67901098-67920552	7	+	67901098	67901098	16724991	5	318,145,282,216,173,	0,1854,16288,17166,19281,
#Deleted in new
chr9	68228650	68229312	chr9:68228650-68229312	3	+	68228650	68228650	8553170	2	81,259,	0,403,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr9	68232002	68299644	chr9:68232002-68299644	0	+	68232002	68232002	8553170	22	196,59,129,87,97,92,60,38,88,47,87,45,123,45,84,206,57,52,69,66,130,164,	0,434,2997,13210,15610,16803,24918,26529,27344,32465,34217,36931,37597,37849,38299,40989,42879,53986,65577,65749,66961,67478,
#Partially deleted in new
chr9	68241480	68300013	chr9:68241480-68300013	3	+	68242031	68299587	789624	15	705,87,97,92,60,38,47,87,45,57,52,69,66,130,533,	0,3732,6132,7325,15440,17051,22987,24739,27453,33401,44508,56099,56271,57483,58000,
#Partially deleted in new
chr9	68241853	68259361	chr9:68241853-68259361	1	+	68242031	68259361	789624	7	332,87,97,92,60,38,15,	0,3359,5759,6952,15067,16678,17493,
#Partially deleted in new
chr9	68241888	68300011	chr9:68241888-68300011	1	+	68242031	68299587	789624	13	297,87,97,92,60,38,47,45,52,69,66,130,531,	0,3324,5724,6917,15032,16643,22579,27045,44100,55691,55863,57075,57592,
#Partially deleted in new
chr9	68241912	68269435	chr9:68241912-68269435	0	+	68242031	68243205	789624	10	273,98,87,97,92,60,38,47,87,502,	0,1270,3300,5700,6893,15008,16619,22555,24307,27021,
#Partially deleted in new
chr9	68241925	68300015	chr9:68241925-68300015	1	+	68242031	68299587	789624	14	260,87,97,92,60,38,47,87,45,52,69,66,130,535,	0,3287,5687,6880,14995,16606,22542,24294,27008,44063,55654,55826,57038,57555,
#Partially deleted in new
chr9	68241944	68248589	chr9:68241944-68248589	0	+	68242031	68243205	789624	4	241,98,87,977,	0,1238,3268,5668,
#Partially deleted in new
chr9	68241948	68298343	chr9:68241948-68298343	0	+	68242031	68259361	789624	14	237,87,97,92,60,38,88,47,87,45,57,52,69,592,	0,3264,5664,6857,14972,16583,17398,22519,24271,26985,32933,44040,55631,55803,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr9	68241950	68299647	chr9:68241950-68299647	0	+	68242031	68259361	789624	17	235,87,97,92,60,38,88,47,87,45,258,819,52,69,66,130,167,	0,3262,5662,6855,14970,16581,17396,22517,24269,26983,28351,32169,44038,55629,55801,57013,57530,
#Partially deleted in new
chr9	68241953	68299994	chr9:68241953-68299994	0	+	68242031	68243205	789624	16	232,98,87,97,92,60,38,47,87,45,57,52,69,66,130,514,	0,1229,3259,5659,6852,14967,16578,22514,24266,26980,32928,44035,55626,55798,57010,57527,
#Partially deleted in new
chr9	68241955	68249031	chr9:68241955-68249031	1	+	68242031	68247713	789624	3	230,87,1419,	0,3257,5657,
#Partially deleted in new
chr9	68241984	68299647	chr9:68241984-68299647	0	+	68242031	68260877	789624	16	201,87,97,92,60,38,145,47,87,45,57,52,69,66,130,167,	0,3228,5628,6821,14936,16547,18872,22483,24235,26949,32897,44004,55595,55767,56979,57496,
#Partially deleted in new
chr9	68241984	68298191	chr9:68241984-68298191	0	+	68242031	68243205	789624	13	201,98,87,97,92,60,38,47,87,45,52,69,440,	0,1198,3228,5628,6821,14936,16547,22483,24235,26949,44004,55595,55767,
#Partially deleted in new
chr9	68241988	68299965	chr9:68241988-68299965	0	+	68242031	68259361	789624	16	197,87,97,92,38,88,140,47,45,123,57,52,69,66,130,485,	0,3224,5624,6817,16543,17358,18868,22479,26945,27611,32893,44000,55591,55763,56975,57492,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	68250468	68251656	chr9:68250468-68251656	3	-	68250468	68250468	8553170	1	1188,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	68253355	68299647	chr9:68253355-68299647	0	+	68253355	68253355	8553170	13	1622,60,38,47,87,45,123,57,52,69,66,130,167,	0,3565,5176,11112,12864,15578,16244,21526,32633,44224,44396,45608,46125,
#Partially deleted in new
chr9	68254360	68299644	chr9:68254360-68299644	0	+	68254360	68254360	8553170	15	617,60,38,88,140,47,87,45,217,57,52,69,66,130,164,	0,2560,4171,4986,6496,10107,11859,14573,15941,20521,31628,43219,43391,44603,45120,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	68256920	68270895	chr9:68256920-68270895	0	+	68256920	68256920	8553170	5	60,38,88,47,1962,	0,1611,2426,7547,12013,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	68272405	68299963	chr9:68272405-68299963	0	+	68272405	68272405	8553170	7	598,1903,52,69,66,130,483,	0,630,13583,25174,25346,26558,27075,
#Partially deleted in new
chr9	68285329	68299965	chr9:68285329-68299965	0	+	68285329	68285329	8553170	3	711,69,2214,	0,12250,12422,
#Deleted in new
chr9	68302866	68304905	chr9:68302866-68304905	3	+	68302951	68304205	789624	1	2039,	0,
#Deleted in new
chr9	68307392	68308445	chr9:68307392-68308445	3	+	68307392	68307392	8553170	2	62,354,	0,699,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	68322410	68330453	chr9:68322410-68330453	1	+	68322410	68322410	789624	6	536,799,224,2428,69,328,	0,616,2623,3852,6478,7715,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	68323606	68330626	chr9:68323606-68330626	0	+	68323606	68323606	789624	4	219,224,2428,501,	0,1427,2656,6519,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	68355188	68357852	chr9:68355188-68357852	0	-	68355188	68355188	789624	2	417,130,	0,2534,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	68355188	68357820	chr9:68355188-68357820	3	-	68355188	68355188	789624	3	417,57,98,	0,1101,2534,
#Partially deleted in new
chr9	68356898	68531061	chr9:68356898-68531061	3	+	68357127	68529656	789624	11	490,163,147,126,191,155,116,136,184,135,1495,	0,21300,27499,30564,34635,35420,108194,122519,126966,142328,172668,
#Partially deleted in new
chr9	68357229	68391701	chr9:68357229-68391701	0	+	68357229	68391701	789624	4	159,163,126,168,	0,20969,30233,34304,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	68393880	68399153	chr9:68393880-68399153	1	-	68393880	68393880	8553170	2	559,71,	0,5202,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	68393882	68399149	chr9:68393882-68399149	1	-	68393882	68393882	8553170	3	557,119,67,	0,4165,5200,
#Deleted in new
chr9	68395692	68399271	chr9:68395692-68399271	3	-	68395692	68395692	8553170	2	2474,189,	0,3390,
#Deleted in new
chr9	68426842	68429369	chr9:68426842-68429369	3	+	68426842	68426842	8553170	2	117,788,	0,1739,
#Partially deleted in new
chr9	68464520	68499285	chr9:68464520-68499285	0	+	68464520	68464520	8553170	5	76,116,136,184,59,	0,572,14897,19344,34706,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	68496824	68531061	chr9:68496824-68531061	0	+	68496824	68496824	8553170	2	2537,1495,	0,32742,
#Partially deleted in new
chr9	68536579	68540867	chr9:68536579-68540867	3	-	68537258	68540814	789624	2	914,331,	0,3957,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	68541035	68644442	chr9:68541035-68644442	3	+	68541035	68541035	8553170	5	195,265,207,222,850,	0,1342,84605,92003,102557,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	68543540	68546116	chr9:68543540-68546116	3	-	68543540	68543540	8553170	4	63,124,120,188,	0,1960,2176,2388,
#Partially deleted in new
chr9	68543540	68546589	chr9:68543540-68546589	0	-	68543540	68543540	789624	4	63,124,120,31,	0,1960,2176,3018,
#Deleted in new
chr9	68609124	68611984	chr9:68609124-68611984	7	+	68609124	68609124	16724991	1	2860,	0,
#Partially deleted in new
chr9	68705413	69009174	chr9:68705413-69009174	1	+	68822614	69008453	789624	14	349,85,69,131,118,153,300,212,84,49,85,156,145,728,	0,113047,117201,158423,171263,183567,188925,212134,214065,214267,217888,229476,235232,303033,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr9	68705699	69009175	chr9:68705699-69009175	3	+	68822614	69008449	789624	16	63,157,85,69,131,118,153,300,212,84,49,85,156,145,118,729,	0,36801,112761,116915,158137,170977,183281,188639,211848,213779,213981,217602,229190,234946,285440,302747,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	68705984	68786160	chr9:68705984-68786160	0	+	68705984	68705984	8553170	5	238,88,170,157,78,	0,21611,22780,36516,80098,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	68705985	68708141	chr9:68705985-68708141	0	+	68705985	68705985	8553170	2	237,539,	0,1617,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	68739833	68876787	chr9:68739833-68876787	0	+	68822614	68876787	789624	6	59,157,85,69,131,111,	0,2667,78627,82781,124003,136843,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	68741583	68894354	chr9:68741583-68894354	0	+	68822614	68894354	789624	8	62,157,85,69,131,118,153,16,	0,917,76877,81031,122253,135093,147397,152755,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	68742254	68889133	chr9:68742254-68889133	0	+	68822614	68889133	789624	7	100,157,85,69,131,118,153,	0,246,76206,80360,121582,134422,146726,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr9	68742254	69009176	chr9:68742254-69009176	0	+	68822614	68963210	789624	21	100,157,85,69,120,131,118,153,300,212,84,49,85,156,145,139,100,60,224,118,730,	0,246,76206,80360,81841,121582,134422,146726,152084,175293,177224,177426,181047,192635,198391,220928,221773,223334,224252,248885,266192,
#Deleted in new
chr9	68780033	68784608	chr9:68780033-68784608	3	+	68780038	68781028	789624	1	4575,	0,
#Deleted in new
chr9	68788306	68789670	chr9:68788306-68789670	7	-	68788306	68788306	16724991	2	146,1102,	0,262,
#Partially deleted in new
chr9	68822402	68843275	chr9:68822402-68843275	3	-	68822402	68822402	8553170	3	246,161,109,	0,1727,20764,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	68935872	68935979	chr9:68935872-68935979	3	-	68935872	68935872	8553170	1	107,	0,
#Deleted in new
chr9	69012528	69014113	chr9:69012528-69014113	3	-	69013036	69014092	789624	1	1585,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	69035258	69079076	chr9:69035258-69079076	3	+	69035782	69072762	0	5	689,98,121,98,6465,	0,11126,17881,29679,37353,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	69035562	69100178	chr9:69035562-69100178	1	+	69035782	69099934	0	5	385,98,121,98,278,	0,10822,17577,29375,64338,
#Partially deleted in new
chr9	69035749	69255187	chr9:69035749-69255187	3	+	69035782	69254374	789624	25	198,161,121,54,125,103,610,104,154,109,134,67,151,109,211,188,96,80,211,101,213,111,330,86,979,	0,64151,115901,176798,180589,182507,185137,189554,190272,192015,192231,193434,194332,198689,200278,201199,202128,202960,204187,210940,212262,213625,215285,217065,218459,
#Partially deleted in new
chr9	69035749	69248929	chr9:69035749-69248929	0	+	69035782	69099934	8553170	24	198,98,121,98,161,121,54,125,103,610,104,154,109,134,67,151,109,211,188,96,80,211,101,918,	0,10635,17390,29188,64151,115901,176798,180589,182507,185137,189554,190272,192015,192231,193434,194332,198689,200278,201199,202128,202960,204187,210940,212262,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr9	69035749	69255094	chr9:69035749-69255094	0	+	69035782	69064950	789624	25	198,98,98,161,121,54,125,103,610,104,154,109,134,67,151,109,211,188,96,80,211,101,213,330,2280,	0,10635,29188,64151,115901,176798,180589,182507,185137,189554,190272,192015,192231,193434,194332,198689,200278,201199,202128,202960,204187,210940,212262,215285,217065,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	69035750	69074850	chr9:69035750-69074850	0	+	69035782	69064950	789624	4	197,98,98,2239,	0,10634,29187,36861,
#Partially deleted in new
chr9	69035761	69073022	chr9:69035761-69073022	1	+	69035782	69072712	0	5	186,98,121,106,411,	0,10623,17378,29176,36850,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	69035768	69079076	chr9:69035768-69079076	1	+	69035782	69072762	0	5	179,98,121,98,6465,	0,10616,17371,29169,36843,
#Partially deleted in new
chr9	69035768	69212556	chr9:69035768-69212556	0	+	69035782	69212556	789624	6	179,98,121,161,121,9,	0,10616,17371,64132,115882,176779,
#Partially deleted in new
chr9	69035780	69100045	chr9:69035780-69100045	0	+	69035782	69053151	789624	4	167,121,98,145,	0,17359,29157,64120,
#Partially deleted in new
chr9	69035784	69216366	chr9:69035784-69216366	0	+	69035784	69099934	789624	8	163,98,121,98,161,121,54,28,	0,10600,17355,29153,64116,115866,176763,180554,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	69036032	69074881	chr9:69036032-69074881	1	+	69046444	69072762	789624	6	155,101,98,121,98,2270,	0,7428,10352,17107,28905,36579,
#Partially deleted in new
chr9	69036160	69073105	chr9:69036160-69073105	1	+	69046444	69072762	789624	5	45,98,121,98,494,	0,10224,16979,28777,36451,
#Deleted in new
chr9	69107925	69108217	chr9:69107925-69108217	7	-	69107925	69107925	16724991	1	292,	0,
#Partially deleted in new
chr9	69121263	69255208	chr9:69121263-69255208	1	+	69212556	69254374	0	22	102,121,54,125,103,610,104,154,109,134,67,151,109,211,188,96,80,211,101,213,86,1000,	0,30387,91284,95075,96993,99623,104040,104758,106501,106717,107920,108818,113175,114764,115685,116614,117446,118673,125426,126748,131551,132945,
#Partially deleted in new
chr9	69121263	69212572	chr9:69121263-69212572	0	+	69212556	69212572	8553170	4	102,242,121,25,	0,220,30387,91284,
#Partially deleted in new
chr9	69121292	69122232	chr9:69121292-69122232	0	+	69121292	69121292	8553170	2	73,749,	0,191,
#Partially deleted in new
chr9	69121307	69221016	chr9:69121307-69221016	0	+	69212556	69221016	789624	6	58,121,54,125,103,130,	0,30343,91240,95031,96949,99579,
#Partially deleted in new
chr9	69121469	69221096	chr9:69121469-69221096	0	+	69212556	69221096	789624	6	256,121,54,125,103,210,	0,30181,91078,94869,96787,99417,
#Partially deleted in new
chr9	69121469	69248898	chr9:69121469-69248898	0	+	69121469	69121469	8553170	19	256,121,54,125,103,610,104,154,109,134,67,151,109,204,188,96,80,211,2209,	0,30181,91078,94869,96787,99417,103834,104552,106295,106511,107714,108612,112969,114565,115479,116408,117240,118467,125220,
#Partially deleted in new
chr9	69145589	69255199	chr9:69145589-69255199	1	+	69145703	69254374	789624	24	230,121,54,125,103,610,104,154,109,134,67,151,109,211,188,96,80,211,101,213,111,330,86,991,	0,6061,66958,70749,72667,75297,79714,80432,82175,82391,83594,84492,88849,90438,91359,92288,93120,94347,101100,102422,103785,105445,107225,108619,
#Partially deleted in new
chr9	69151645	69218539	chr9:69151645-69218539	0	+	69151645	69151645	8553170	4	126,54,125,283,	0,60902,64693,66611,
#Partially deleted in new
chr9	69174054	69255208	chr9:69174054-69255208	1	+	69174372	69254374	789624	23	378,54,125,103,610,104,154,109,134,67,151,109,211,188,96,80,211,101,213,111,330,86,1000,	0,38493,42284,44202,46832,51249,51967,53710,53926,55129,56027,60384,61973,62894,63823,64655,65882,72635,73957,75320,76980,78760,80154,
#Partially deleted in new
chr9	69174276	69255201	chr9:69174276-69255201	1	+	69174372	69254374	0	21	156,54,125,103,610,104,154,109,134,67,151,109,211,188,96,80,211,101,213,86,993,	0,38271,42062,43980,46610,51027,51745,53488,53704,54907,55805,60162,61751,62672,63601,64433,65660,72413,73735,78538,79932,
#Partially deleted in new
chr9	69174276	69255208	chr9:69174276-69255208	1	+	69174372	69254374	0	23	156,54,125,103,610,104,154,109,134,67,151,109,211,188,96,80,211,101,213,111,330,86,1000,	0,38271,42062,43980,46610,51027,51745,53488,53704,54907,55805,60162,61751,62672,63601,64433,65660,72413,73735,75098,76758,78538,79932,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr9	69174281	69255187	chr9:69174281-69255187	1	+	69174372	69252904	8553170	20	151,54,125,103,610,104,154,109,134,67,151,109,211,188,96,80,211,101,213,2373,	0,38266,42057,43975,46605,51022,51740,53483,53699,54902,55800,60157,61746,62667,63596,64428,65655,72408,73730,78533,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr9	69174281	69255185	chr9:69174281-69255185	1	+	69174372	69252904	8553170	21	151,54,125,103,610,104,154,109,134,67,151,109,211,188,96,80,211,101,213,330,2371,	0,38266,42057,43975,46605,51022,51740,53483,53699,54902,55800,60157,61746,62667,63596,64428,65655,72408,73730,76753,78533,
#Partially deleted in new
chr9	69174293	69248990	chr9:69174293-69248990	0	+	69174293	69174293	8553170	19	139,54,125,103,610,104,154,109,134,67,151,109,211,188,96,80,211,101,979,	0,38254,42045,43963,46593,51010,51728,53471,53687,54890,55788,60145,61734,62655,63584,64416,65643,72396,73718,
#Partially deleted in new
chr9	69174376	69274615	chr9:69174376-69274615	1	+	69212556	69274455	8553170	23	56,54,125,103,610,104,154,109,134,67,151,109,211,188,96,80,211,101,213,111,330,86,209,	0,38171,41962,43880,46510,50927,51645,53388,53604,54807,55705,60062,61651,62572,63501,64333,65560,72313,73635,74998,76658,78438,100030,
#Partially deleted in new
chr9	69176941	69255152	chr9:69176941-69255152	0	+	69176941	69176941	8553170	23	9,75,54,125,103,610,104,154,109,134,67,151,109,211,188,96,80,211,101,213,330,86,944,	0,28217,35606,39397,41315,43945,48362,49080,50823,51039,52242,53140,57497,59086,60007,60936,61768,62995,69748,71070,74093,75873,77267,
#Partially deleted in new
chr9	69176941	69255163	chr9:69176941-69255163	0	+	69176941	69176941	8553170	19	9,75,54,125,103,610,67,151,109,211,188,96,80,211,101,213,330,86,955,	0,28217,35606,39397,41315,43945,52242,53140,57497,59086,60007,60936,61768,62995,69748,71070,74093,75873,77267,
#Partially deleted in new
chr9	69204797	69254520	chr9:69204797-69254520	1	+	69205161	69254374	0	22	436,54,125,103,610,104,154,109,134,67,151,109,211,188,96,80,211,101,213,330,86,312,	0,7750,11541,13459,16089,20506,21224,22967,23183,24386,25284,29641,31230,32151,33080,33912,35139,41892,43214,46237,48017,49411,
#Partially deleted in new
chr9	69204989	69221081	chr9:69204989-69221081	0	+	69212556	69221081	8553170	5	120,54,125,103,195,	0,7558,11349,13267,15897,
#Partially deleted in new
chr9	69205154	69255187	chr9:69205154-69255187	1	+	69205161	69254374	8553170	21	79,54,125,103,610,104,154,109,134,67,151,109,211,188,96,80,211,101,213,86,979,	0,7393,11184,13102,15732,20149,20867,22610,22826,24029,24927,29284,30873,31794,32723,33555,34782,41535,42857,47660,49054,
#Partially deleted in new
chr9	69205161	69254546	chr9:69205161-69254546	1	+	69205161	69254374	0	23	153,54,125,103,610,104,154,109,134,67,151,109,211,188,96,80,211,101,213,111,330,86,338,	0,7386,11177,13095,15725,20142,20860,22603,22819,24022,24920,29277,30866,31787,32716,33548,34775,41528,42850,44213,45873,47653,49047,
#Partially deleted in new
chr9	69205170	69255187	chr9:69205170-69255187	0	+	69205170	69254374	8553170	23	63,54,125,103,610,104,154,109,134,67,151,109,211,188,96,80,211,101,213,111,330,86,979,	0,7377,11168,13086,15716,20133,20851,22594,22810,24013,24911,29268,30857,31778,32707,33539,34766,41519,42841,44204,45864,47644,49038,
#Partially deleted in new
chr9	69205189	69221015	chr9:69205189-69221015	0	+	69212556	69221015	8553170	5	1072,54,125,103,129,	0,7358,11149,13067,15697,
#Partially deleted in new
chr9	69212358	69221145	chr9:69212358-69221145	0	+	69212358	69212358	8553170	5	88,54,125,103,259,	0,189,3980,5898,8528,
#Partially deleted in new
chr9	69221271	69255134	chr9:69221271-69255134	0	+	69221271	69252840	8553170	15	225,104,154,109,134,67,151,109,211,188,96,80,211,86,926,	0,4032,4750,6493,6709,7912,8810,13167,14756,15677,16606,17438,18665,31543,32937,
#Partially deleted in new
chr9	69221332	69225603	chr9:69221332-69225603	0	+	69221332	69221332	8553170	2	164,300,	0,3971,
#Partially deleted in new
chr9	69227845	69255187	chr9:69227845-69255187	0	+	69227845	69254374	8553170	14	28,134,67,151,109,211,188,96,80,211,101,330,86,979,	0,135,1338,2236,6593,8182,9103,10032,10864,12091,18844,23189,24969,26363,
#Partially deleted in new
chr9	69229735	69236032	chr9:69229735-69236032	0	+	69229735	69229735	8553170	3	497,109,5,	0,4703,6292,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	69240036	69255180	chr9:69240036-69255180	0	+	69240036	69240036	8553170	6	111,101,213,111,1866,972,	0,6653,7975,9338,10998,14172,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	69244686	69255182	chr9:69244686-69255182	0	+	69244686	69244686	8553170	3	2104,213,2368,	0,3325,8128,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	69247638	69255180	chr9:69247638-69255180	0	+	69247638	69247638	8553170	3	586,330,2366,	0,3396,5176,
#Partially deleted in new
chr9	69324566	69392558	chr9:69324566-69392558	1	+	69336257	69391804	789624	11	64,57,111,129,108,134,130,79,153,293,958,	0,11646,46932,51169,52803,53044,59063,59380,61228,63591,67034,
#Partially deleted in new
chr9	69324585	69392439	chr9:69324585-69392439	0	+	69336257	69377573	789624	10	45,57,111,129,375,130,79,153,293,839,	0,11627,46913,51150,52784,59044,59361,61209,63572,67015,
#Partially deleted in new
chr9	69325221	69392552	chr9:69325221-69392552	3	+	69325309	69391804	789624	11	502,57,111,129,108,134,130,79,153,293,952,	0,10991,46277,50514,52148,52389,58408,58725,60573,62936,66379,
#Partially deleted in new
chr9	69329324	69392454	chr9:69329324-69392454	1	+	69336257	69391804	789624	11	375,57,111,129,108,134,130,79,153,293,854,	0,6888,42174,46411,48045,48286,54305,54622,56470,58833,62276,
#Partially deleted in new
chr9	69371265	69392455	chr9:69371265-69392455	0	+	69371265	69371265	8553170	9	170,129,108,134,130,79,153,293,855,	0,4470,6104,6345,12364,12681,14529,16892,20335,
#Partially deleted in new
chr9	69375781	69392455	chr9:69375781-69392455	0	+	69375781	69375781	8553170	7	83,108,134,130,79,2656,855,	0,1588,1829,7848,8165,10013,15819,
#Partially deleted in new
chr9	69375782	69392454	chr9:69375782-69392454	0	+	69375782	69375782	8553170	7	82,108,134,130,79,153,854,	0,1587,1828,7847,8164,10012,15818,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	69379575	69388445	chr9:69379575-69388445	0	+	69379575	69379575	8553170	5	3946,130,79,153,288,	0,4054,4371,6219,8582,
#Partially deleted in new
chr9	69382907	69392439	chr9:69382907-69392439	0	+	69382907	69382907	8553170	8	211,76,130,79,153,1125,293,839,	0,538,722,1039,2887,3651,5250,8693,
#Partially deleted in new
chr9	69427529	69672306	chr9:69427529-69672306	3	-	69431326	69517210	0	13	3869,141,120,213,180,186,87,33,146,40,96,1269,154,	0,5006,13466,22054,24592,28717,29523,30626,40293,44126,48518,88481,244623,
#Partially deleted in new
chr9	69428247	69428721	chr9:69428247-69428721	3	-	69428247	69428247	8553170	2	304,94,	0,380,
#Partially deleted in new
chr9	69456278	69467948	chr9:69456278-69467948	0	-	69456278	69467948	789624	3	154,87,126,	0,774,11544,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	69460672	69465522	chr9:69460672-69465522	0	-	69460672	69460672	8553170	1	4850,	0,
#Partially deleted in new
chr9	69472465	69494513	chr9:69472465-69494513	3	+	69472465	69472465	8553170	3	125,90,227,	0,1797,21821,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	69672748	69673713	chr9:69672748-69673713	3	+	69672748	69672748	8553170	1	965,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	69709521	69759941	chr9:69709521-69759941	3	-	69718341	69759938	789624	5	9163,305,214,105,89,	0,13804,22617,24628,50331,
#Partially deleted in new
chr9	69718020	69723571	chr9:69718020-69723571	0	-	69718341	69723571	789624	3	545,35,246,	0,629,5305,
#Partially deleted in new
chr9	69718137	69759942	chr9:69718137-69759942	1	-	69718341	69759938	789624	8	431,35,305,214,105,67,170,90,	0,512,5188,14001,16012,23654,32643,41715,
#Partially deleted in new
chr9	69731931	69734258	chr9:69731931-69734258	0	-	69731931	69731931	8553170	2	421,109,	0,2218,
#Partially deleted in new
chr9	69741515	69759955	chr9:69741515-69759955	0	-	69741515	69741515	8553170	3	343,170,103,	0,9265,18337,
#Deleted in new
chr9	69757122	69759959	chr9:69757122-69759959	1	-	69758700	69759938	789624	2	1582,107,	0,2730,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	69818982	69820739	chr9:69818982-69820739	1	-	69818982	69818982	789624	2	1285,90,	0,1667,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	69819404	69820667	chr9:69819404-69820667	2	-	69819404	69819404	8553170	2	860,115,	0,1148,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	69819826	69820683	chr9:69819826-69820683	0	-	69819826	69819826	8553170	2	441,127,	0,730,
#Partially deleted in new
chr9	69820792	69906232	chr9:69820792-69906232	3	+	69820879	69906136	789624	6	239,109,119,69,58,279,	0,23724,35762,37116,66045,85161,
#Partially deleted in new
chr9	69820826	69906199	chr9:69820826-69906199	1	+	69820879	69905984	789624	5	205,109,119,69,246,	0,23690,35728,37082,85127,
#Partially deleted in new
chr9	69820826	69906199	chr9:69820826-69906199	0	+	69820879	69856555	789624	5	205,119,69,58,246,	0,35728,37082,66011,85127,
#Partially deleted in new
chr9	69820827	69906227	chr9:69820827-69906227	0	+	69820827	69820827	789624	6	204,119,69,70,58,274,	0,35727,37081,64225,66010,85126,
#Partially deleted in new
chr9	69820827	69906194	chr9:69820827-69906194	0	+	69820879	69856555	789624	6	204,119,69,58,134,241,	0,35727,37081,66010,81427,85126,
#Partially deleted in new
chr9	69820919	69858179	chr9:69820919-69858179	0	+	69820919	69856555	789624	3	112,119,271,	0,35635,36989,
#Partially deleted in new
chr9	69820959	69858158	chr9:69820959-69858158	0	+	69820959	69858056	789624	4	72,109,119,250,	0,23557,35595,36949,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	69884362	69884654	chr9:69884362-69884654	3	-	69884362	69884362	8553170	1	292,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	70033920	70088424	chr9:70033920-70088424	0	-	70033920	70033920	8553170	3	279,92,106,	0,53618,54398,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	70033920	70088424	chr9:70033920-70088424	0	-	70033920	70033920	8553170	5	279,101,96,92,106,	0,48053,48884,53618,54398,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	70034087	70088424	chr9:70034087-70088424	0	-	70034087	70034087	8553170	4	112,101,92,106,	0,47886,53451,54231,
#Partially deleted in new
chr9	70043580	70226970	chr9:70043580-70226970	3	+	70044197	70226032	789624	14	651,114,272,85,138,257,94,144,266,94,153,260,85,1003,	0,1003,64630,66139,69414,82578,87938,96564,99973,125121,126898,174756,182169,182387,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	70060556	70088424	chr9:70060556-70088424	0	-	70060556	70060556	8553170	4	56,101,92,106,	0,21417,26982,27762,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	70062534	70088424	chr9:70062534-70088424	0	-	70062534	70062534	8553170	5	211,101,96,92,106,	0,19439,20270,25004,25784,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	70062579	70088424	chr9:70062579-70088424	0	-	70062579	70062579	8553170	3	166,92,106,	0,24959,25739,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	70062879	70088424	chr9:70062879-70088424	0	-	70062879	70062879	8553170	3	366,92,106,	0,24659,25439,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	70071580	70088424	chr9:70071580-70088424	0	-	70071580	70071580	8553170	5	157,101,96,92,106,	0,10393,11224,15958,16738,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	70071589	70088424	chr9:70071589-70088424	0	-	70071589	70071589	8553170	6	148,114,101,96,92,106,	0,7656,10384,11215,15949,16729,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	70071607	70088424	chr9:70071607-70088424	0	-	70071607	70071607	8553170	4	130,101,92,106,	0,10366,15931,16711,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	70071708	70088424	chr9:70071708-70088424	0	-	70071708	70071708	8553170	7	29,114,101,41,96,92,106,	0,7537,10265,10913,11096,15830,16610,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	70081492	70088424	chr9:70081492-70088424	0	-	70081492	70081492	8553170	4	582,96,92,106,	0,1312,6046,6826,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	70082602	70088424	chr9:70082602-70088424	0	-	70082602	70082602	8553170	3	298,92,106,	0,4936,5716,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	70083405	70088424	chr9:70083405-70088424	0	-	70083405	70083405	8553170	3	339,92,106,	0,4133,4913,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	70085815	70113860	chr9:70085815-70113860	1	-	70085815	70085815	8553170	3	1815,176,106,	0,2503,27939,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	70087418	70089236	chr9:70087418-70089236	0	-	70087418	70087418	8553170	2	212,918,	0,900,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	70087418	70092706	chr9:70087418-70092706	0	-	70087418	70087418	8553170	4	212,176,185,456,	0,900,3187,4832,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	70087418	70175883	chr9:70087418-70175883	0	-	70087418	70087418	8553170	9	212,176,127,137,106,98,94,87,129,	0,900,18497,21789,26336,60562,66729,83619,88336,
#Partially deleted in new
chr9	70087589	70093962	chr9:70087589-70093962	0	-	70087589	70087589	8553170	4	41,176,46,186,	0,729,5110,6187,
#Partially deleted in new
chr9	70153133	70157540	chr9:70153133-70157540	3	-	70153133	70153133	8553170	3	194,94,29,	0,1014,4378,
#Partially deleted in new
chr9	70168614	70170782	chr9:70168614-70170782	0	+	70168614	70168614	8553170	2	181,304,	0,1864,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	70169641	70175888	chr9:70169641-70175888	1	-	70169641	70169641	8553170	3	1483,306,134,	0,2918,6113,
#Deleted in new
chr9	70171998	70172767	chr9:70171998-70172767	1	-	70171998	70171998	8553170	2	131,208,	0,561,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	70188570	70188750	chr9:70188570-70188750	3	-	70188570	70188570	8553170	1	180,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	70193996	70258866	chr9:70193996-70258866	3	-	70193996	70193996	8553170	4	559,136,171,952,	0,22289,24318,63918,
#Deleted in new
chr9	70217194	70217668	chr9:70217194-70217668	7	+	70217194	70217194	16724991	1	474,	0,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr9	70258961	70354888	chr9:70258961-70354888	3	+	70259078	70352331	789624	25	302,142,53,163,135,141,162,72,256,155,114,95,133,174,170,124,123,126,45,96,105,120,180,96,2698,	0,5342,8961,18348,19529,21797,23460,27238,39004,41084,46285,55780,56484,59552,59832,64521,65059,85182,87643,88104,88651,88957,91152,91414,93229,
#Partially deleted in new
chr9	70282471	70286784	chr9:70282471-70286784	0	+	70282471	70282471	8553170	3	112,72,39,	0,3728,4274,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	70310874	70312120	chr9:70310874-70312120	3	+	70310874	70310874	8553170	1	1246,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	70311606	70311701	chr9:70311606-70311701	3	-	70311606	70311606	8553170	1	95,	0,
#Partially deleted in new
chr9	70323572	70344674	chr9:70323572-70344674	0	+	70323572	70323572	8553170	3	34,123,531,	0,448,20571,
#Partially deleted in new
chr9	70346391	70352245	chr9:70346391-70352245	0	+	70346391	70346391	8553170	7	258,96,105,120,180,96,55,	0,674,1221,1527,3722,3984,5799,
#Partially deleted in new
chr9	70384596	70414624	chr9:70384596-70414624	3	-	70387775	70413363	789624	2	3409,1766,	0,28262,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr9	70529062	71121598	chr9:70529062-71121598	1	-	70535952	71121354	789624	25	8343,133,200,151,175,252,129,141,168,229,290,30,141,51,135,101,73,124,175,172,125,214,205,80,421,	0,20479,23781,24097,61968,69356,74279,81546,86845,89804,91013,92181,96128,106148,109997,111497,152443,232538,255042,298784,313940,317315,333845,335369,592115,
#Partially deleted in new
chr9	70535032	71121598	chr9:70535032-71121598	1	-	70535428	71121354	789624	26	419,284,133,200,151,175,252,129,141,168,229,290,30,141,51,135,101,73,124,175,172,125,214,205,80,421,	0,2089,14509,17811,18127,55998,63386,68309,75576,80875,83834,85043,86211,90158,100178,104027,105527,146473,226568,249072,292814,307970,311345,327875,329399,586145,
#Partially deleted in new
chr9	70535051	70869058	chr9:70535051-70869058	1	-	70535952	70862910	789624	25	2354,133,200,151,175,252,129,141,168,229,290,141,51,135,101,73,124,175,75,172,125,214,205,80,73,	0,14490,17792,18108,55979,63367,68290,75557,80856,83815,85024,90139,100159,104008,105508,146454,226549,249053,276118,292795,307951,311326,327856,329380,333934,
#Partially deleted in new
chr9	70535051	70869058	chr9:70535051-70869058	1	-	70535952	70862910	789624	26	2354,133,200,151,175,252,129,141,168,229,290,30,141,36,51,135,101,73,124,175,172,125,214,205,80,73,	0,14490,17792,18108,55979,63367,68290,75557,80856,83815,85024,86192,90139,90430,100159,104008,105508,146454,226549,249053,292795,307951,311326,327856,329380,333934,
#Partially deleted in new
chr9	70535943	71446835	chr9:70535943-71446835	1	-	70535952	71446835	789624	25	1462,133,200,151,175,252,129,141,168,229,290,141,36,51,135,101,73,124,175,172,125,214,205,80,183,	0,13598,16900,17216,55087,62475,67398,74665,79964,82923,84132,89247,89538,99267,103116,104616,145562,225657,248161,291903,307059,310434,326964,328488,910709,
#Partially deleted in new
chr9	70535952	70862910	chr9:70535952-70862910	1	-	70535952	70862910	789624	23	1453,133,200,151,175,252,129,141,168,229,290,141,51,135,101,73,124,175,75,172,125,214,3,	0,13589,16891,17207,55078,62466,67389,74656,79955,82914,84123,89238,99258,103107,104607,145553,225648,248152,275217,291894,307050,310425,326955,
#Partially deleted in new
chr9	70535952	70862910	chr9:70535952-70862910	1	-	70535952	70862910	789624	23	1453,133,200,151,175,252,129,141,168,229,290,141,36,51,135,101,73,124,175,172,125,214,3,	0,13589,16891,17207,55078,62466,67389,74656,79955,82914,84123,89238,89529,99258,103107,104607,145553,225648,248152,291894,307050,310425,326955,
#Partially deleted in new
chr9	70535952	70862910	chr9:70535952-70862910	1	-	70535952	70862910	789624	23	1453,133,200,151,211,252,129,141,168,229,290,30,141,51,135,101,73,124,175,172,125,214,3,	0,13589,16891,17207,55042,62466,67389,74656,79955,82914,84123,85291,89238,99258,103107,104607,145553,225648,248152,291894,307050,310425,326955,
#Partially deleted in new
chr9	70535952	70862910	chr9:70535952-70862910	3	-	70535952	70862910	789624	24	1453,133,200,151,175,252,129,141,168,229,290,30,141,51,135,101,73,124,175,75,172,125,214,3,	0,13589,16891,17207,55078,62466,67389,74656,79955,82914,84123,85291,89238,99258,103107,104607,145553,225648,248152,275217,291894,307050,310425,326955,
#Partially deleted in new
chr9	70535952	70862910	chr9:70535952-70862910	1	-	70535952	70862910	789624	24	1453,133,200,151,175,252,129,141,168,229,290,30,141,36,51,135,101,73,124,175,172,125,214,3,	0,13589,16891,17207,55078,62466,67389,74656,79955,82914,84123,85291,89238,89529,99258,103107,104607,145553,225648,248152,291894,307050,310425,326955,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	70579162	70579461	chr9:70579162-70579461	3	-	70579162	70579162	8553170	1	299,	0,
#Deleted in new
chr9	70708046	70712863	chr9:70708046-70712863	3	+	70708046	70708046	8553170	2	186,151,	0,4666,
#Deleted in new
chr9	70726039	70730856	chr9:70726039-70730856	3	+	70726039	70726039	8553170	2	186,151,	0,4666,
#Partially deleted in new
chr9	70760687	70869052	chr9:70760687-70869052	1	-	70761441	70862910	789624	8	1037,175,172,125,214,205,80,67,	0,23417,67159,82315,85690,102220,103744,108298,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	70774087	70869023	chr9:70774087-70869023	1	-	70776423	70862910	789624	9	2400,175,75,172,125,214,205,80,38,	0,10017,37082,53759,68915,72290,88820,90344,94898,
#Partially deleted in new
chr9	70783859	70869029	chr9:70783859-70869029	1	-	70784100	70862910	789624	7	420,172,125,214,205,80,44,	0,43987,59143,62518,79048,80572,85126,
#Deleted in new
chr9	70809974	70810084	chr9:70809974-70810084	3	-	70809974	70809974	5263520	1	110,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	70824435	71446904	chr9:70824435-71446904	0	-	70824435	70824435	8553170	6	3583,125,214,205,80,252,	0,18567,21942,38472,39996,622217,
#Partially deleted in new
chr9	70842918	70863038	chr9:70842918-70863038	1	-	70842972	70862910	789624	3	209,214,131,	0,3459,19989,
#Deleted in new
chr9	70862921	70865469	chr9:70862921-70865469	0	-	70862921	70862921	8553170	3	191,80,129,	0,1510,2419,
#Partially deleted in new
chr9	70916996	70917501	chr9:70916996-70917501	7	-	70916996	70916996	16724991	1	505,	0,
#Deleted in new
chr9	71589600	71589933	chr9:71589600-71589933	7	+	71589600	71589600	16724991	1	333,	0,
#Partially deleted in new
chr9	71683365	71768884	chr9:71683365-71768884	3	-	71685196	71750373	789624	24	2028,104,155,99,220,183,209,216,178,156,36,132,89,129,70,206,210,170,189,170,562,141,343,528,	0,2377,6726,11143,14619,17276,21229,25893,28717,31568,33151,34582,39061,42215,46479,46682,47339,48985,51440,56697,61652,62835,66677,84991,
#Partially deleted in new
chr9	71683371	71698241	chr9:71683371-71698241	0	-	71683371	71683371	8553170	5	2022,104,155,99,257,	0,2371,6720,11137,14613,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	71683570	71687428	chr9:71683570-71687428	0	-	71683570	71683570	8553170	2	1823,1686,	0,2172,
#Partially deleted in new
chr9	71683984	71768386	chr9:71683984-71768386	1	-	71685196	71750373	789624	23	1409,104,155,99,220,183,209,216,178,156,36,132,89,129,70,206,210,170,170,562,141,343,30,	0,1758,6107,10524,14000,16657,20610,25274,28098,30949,32532,33963,38442,41596,45860,46063,46720,48366,56078,61033,62216,66058,84372,
#Partially deleted in new
chr9	71683984	71768386	chr9:71683984-71768386	0	-	71730249	71750373	789624	24	1409,104,155,99,220,183,209,216,178,156,36,132,89,129,70,206,176,170,189,170,562,141,343,30,	0,1758,6107,10524,14000,16657,20610,25274,28098,30949,32532,33963,38442,41596,45860,46063,46754,48366,50821,56078,61033,62216,66058,84372,
#Partially deleted in new
chr9	71685055	71704932	chr9:71685055-71704932	1	-	71685196	71704767	789624	7	338,104,155,99,220,183,338,	0,687,5036,9453,12929,15586,19539,
#Partially deleted in new
chr9	71697827	71704813	chr9:71697827-71704813	0	-	71697827	71697827	8553170	3	377,183,219,	0,2814,6767,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	71699191	71709330	chr9:71699191-71709330	0	-	71699376	71709330	789624	4	258,183,209,72,	0,1450,5403,10067,
#Partially deleted in new
chr9	71704416	71712154	chr9:71704416-71712154	0	-	71704560	71712154	789624	3	387,216,72,	0,4842,7666,
#Partially deleted in new
chr9	71704799	71712443	chr9:71704799-71712443	0	-	71704799	71704799	8553170	3	4,216,361,	0,4459,7283,
#Deleted in new
chr9	71730152	71730984	chr9:71730152-71730984	0	-	71730152	71730152	8553170	2	101,280,	0,552,
#Partially deleted in new
chr9	71750000	71768513	chr9:71750000-71768513	0	-	71750000	71750000	8553170	2	385,157,	0,18356,
#Partially deleted in new
chr9	71750318	71816690	chr9:71750318-71816690	0	-	71750318	71750373	789624	3	67,338,128,	0,64636,66244,
#Deleted in new
chr9	71804282	71804826	chr9:71804282-71804826	7	+	71804282	71804282	16724991	1	544,	0,
#Partially deleted in new
chr9	71862451	71910931	chr9:71862451-71910931	1	-	71862580	71875080	789624	5	156,208,180,470,298,	0,4347,7631,12162,48182,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	71865151	71910742	chr9:71865151-71910742	3	-	71866786	71875080	789624	4	1855,180,470,109,	0,4931,9462,45482,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	71902454	71902550	chr9:71902454-71902550	3	-	71902454	71902454	8553170	1	96,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	71911509	71973152	chr9:71911509-71973152	0	+	71911734	71971510	789624	3	327,114,461,	0,59995,61182,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	71911544	71973457	chr9:71911544-71973457	3	+	71911734	71972842	789624	4	292,107,114,766,	0,35461,59960,61147,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	71911544	71983250	chr9:71911544-71983250	1	+	71911734	71982873	789624	4	292,107,114,594,	0,35461,59960,71112,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	71911640	71971618	chr9:71911640-71971618	0	+	71911734	71918457	789624	5	196,131,130,107,114,	0,6784,30164,35365,59864,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	71911660	71986054	chr9:71911660-71986054	1	+	71911734	71983017	789624	3	176,107,3038,	0,35345,71356,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	71911801	71972843	chr9:71911801-71972843	0	+	71911801	71918457	789624	5	35,131,107,114,152,	0,6623,35204,59703,60890,
#Deleted in new
chr9	72007880	72008136	chr9:72007880-72008136	7	-	72007880	72007880	16724991	1	256,	0,
#Partially deleted in new
chr9	72051375	72060605	chr9:72051375-72060605	3	-	72052295	72060509	789624	5	1060,123,60,150,109,	0,4698,5408,7859,9121,
#Partially deleted in new
chr9	72107817	72108312	chr9:72107817-72108312	7	-	72107817	72107817	16724991	1	495,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr9	72114594	72252223	chr9:72114594-72252223	1	+	72202580	72248342	0	14	239,89,172,88,106,28,108,108,98,68,147,131,28,3952,	0,80905,87976,96092,99291,104884,108525,111082,113348,116519,126557,130553,132811,133677,
#Partially deleted in new
chr9	72149350	72252223	chr9:72149350-72252223	1	+	72149559	72250804	0	16	332,89,172,88,106,28,108,108,98,68,147,131,28,67,92,412,	0,46149,53220,61336,64535,70128,73769,76326,78592,81763,91801,95797,98055,98921,101399,102461,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr9	72149452	72253560	chr9:72149452-72253560	3	+	72149681	72250804	789624	15	230,85,172,88,106,28,108,98,68,147,131,28,67,92,323,	0,46051,53118,61234,64433,70026,76224,78490,81661,91699,95695,97953,98819,101297,103785,
#Partially deleted in new
chr9	72149466	72252224	chr9:72149466-72252224	1	+	72149559	72248342	0	14	216,89,172,88,106,28,108,108,98,68,147,131,28,3953,	0,46033,53104,61220,64419,70012,73653,76210,78476,81647,91685,95681,97939,98805,
#Partially deleted in new
chr9	72149474	72252224	chr9:72149474-72252224	0	+	72149559	72248342	0	16	208,89,172,88,106,28,108,108,98,68,147,131,28,135,92,413,	0,46025,53096,61212,64411,70004,73645,76202,78468,81639,91677,95673,97931,98797,101275,102337,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	72193821	72229171	chr9:72193821-72229171	0	+	72193821	72193821	8553170	10	337,85,98,172,88,106,28,108,108,1229,	0,1682,3640,8749,16865,20064,25657,29298,31855,34121,
#Partially deleted in new
chr9	72227955	72257193	chr9:72227955-72257193	0	+	72227955	72248342	789624	8	85,68,147,131,28,135,92,202,	0,3158,13196,17192,19450,20316,22794,29036,
#Partially deleted in new
chr9	72227996	72252224	chr9:72227996-72252224	0	+	72227996	72250804	789624	8	44,68,147,131,28,67,92,413,	0,3117,13155,17151,19409,20275,22753,23815,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	72257335	72257783	chr9:72257335-72257783	3	+	72257335	72257335	8553170	2	70,291,	0,157,
#Deleted in new
chr9	72275452	72275973	chr9:72275452-72275973	7	+	72275452	72275452	16724991	2	373,50,	0,471,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	72299719	72299838	chr9:72299719-72299838	7	-	72299719	72299719	16724991	1	119,	0,
#Partially deleted in new
chr9	72305429	72315464	chr9:72305429-72315464	1	+	72305429	72305429	789624	2	196,475,	0,9560,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	72305435	72343210	chr9:72305435-72343210	3	+	72305435	72305435	789624	5	190,105,58,106,1619,	0,9550,23228,29956,36156,
#Partially deleted in new
chr9	72305516	72315464	chr9:72305516-72315464	0	+	72305516	72305516	8553170	2	109,479,	0,9469,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	72351424	72364592	chr9:72351424-72364592	3	-	72355952	72360778	789624	6	4677,126,104,112,160,131,	0,5506,7993,8685,9203,13037,
#Partially deleted in new
chr9	72354457	72365235	chr9:72354457-72365235	1	-	72355952	72360778	789624	6	1644,126,104,112,160,540,	0,2473,4960,5652,6170,10238,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	72354457	72365197	chr9:72354457-72365197	1	-	72355952	72360778	789624	7	1644,126,104,112,160,137,502,	0,2473,4960,5652,6170,9012,10238,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	72354457	72364346	chr9:72354457-72364346	0	-	72354457	72354457	8553170	6	1644,126,104,112,157,877,	0,2473,4960,5652,6170,9012,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	72355832	72364626	chr9:72355832-72364626	1	-	72355952	72360778	789624	7	269,126,104,112,160,137,165,	0,1098,3585,4277,4795,7637,8629,
#Deleted in new
chr9	72355954	72360285	chr9:72355954-72360285	0	-	72355954	72355954	8553170	4	147,126,104,176,	0,976,3463,4155,
#Partially deleted in new
chr9	72356945	72364664	chr9:72356945-72364664	0	-	72356945	72364608	789624	5	111,104,112,160,203,	0,2472,3164,3682,7516,
#Partially deleted in new
chr9	72360437	72364976	chr9:72360437-72364976	0	-	72360437	72360437	8553170	2	350,281,	0,4258,
#Deleted in new
chr9	72445753	72445969	chr9:72445753-72445969	7	-	72445753	72445753	16724991	1	216,	0,
#Partially deleted in new
chr9	72470373	72471076	chr9:72470373-72471076	7	+	72470373	72470373	16724991	2	240,152,	0,551,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	72521607	72627969	chr9:72521607-72627969	0	+	72521607	72521607	8553170	3	306,110,49,	0,94760,106313,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr9	72521800	72836351	chr9:72521800-72836351	3	+	72648648	72835973	789624	24	113,122,110,143,68,48,172,126,91,82,107,99,143,145,195,180,162,129,68,240,126,79,52,401,	0,56101,94567,106120,126796,166908,172742,178717,218318,220643,230049,232985,250612,266538,267322,270085,270390,283581,294342,299041,305068,308650,308830,314150,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	72577787	72628344	chr9:72577787-72628344	0	+	72577787	72577787	8553170	4	236,12,110,424,	0,546,38580,50133,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr9	72577787	72836214	chr9:72577787-72836214	1	+	72648648	72835973	789624	23	236,110,143,68,48,172,126,91,82,107,99,143,145,195,180,162,129,68,240,126,79,52,264,	0,38580,50133,70809,110921,116755,122730,162331,164656,174062,176998,194625,210551,211335,214098,214403,227594,238355,243054,249081,252663,252843,258163,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr9	72577921	72838230	chr9:72577921-72838230	0	+	72740194	72826880	789624	19	102,110,143,48,172,91,82,107,99,143,145,195,180,162,129,126,79,52,2280,	0,38446,49999,110787,116621,162197,164522,173928,176864,194491,210417,211201,213964,214269,227460,248947,252529,252709,258029,
#Partially deleted in new
chr9	72616265	72836351	chr9:72616265-72836351	1	+	72648648	72835973	789624	22	212,143,68,48,172,126,91,82,107,99,143,145,195,180,162,129,68,240,126,79,52,401,	0,11655,32331,72443,78277,84252,123853,126178,135584,138520,156147,172073,172857,175620,175925,189116,199877,204576,210603,214185,214365,219685,
#Partially deleted in new
chr9	72628019	72836061	chr9:72628019-72836061	0	+	72740194	72817085	789624	20	44,48,172,91,82,107,99,143,145,195,180,162,129,68,204,240,126,79,52,111,	0,60689,66523,112099,114424,123830,126766,144393,160319,161103,163866,164171,177362,188123,189065,192822,198849,202431,202611,207931,
#Partially deleted in new
chr9	72628019	72836061	chr9:72628019-72836061	0	+	72628019	72628019	8553170	20	44,48,184,126,91,82,107,99,143,145,195,180,162,232,68,240,126,79,52,111,	0,60689,66511,72498,112099,114424,123830,126766,144393,160319,161103,163866,164171,177259,188123,192822,198849,202431,202611,207931,
#Partially deleted in new
chr9	72628019	72836061	chr9:72628019-72836061	0	+	72740194	72836061	789624	18	44,48,172,91,82,107,99,143,145,195,180,162,129,68,240,126,79,111,	0,60689,66523,112099,114424,123830,126766,144393,160319,161103,163866,164171,177362,188123,192822,198849,202431,207931,
#Partially deleted in new
chr9	72628024	72651618	chr9:72628024-72651618	0	+	72628024	72628024	8553170	3	39,68,455,	0,20572,23139,
#Deleted in new
chr9	72655831	72656192	chr9:72655831-72656192	7	-	72655831	72655831	16724991	1	361,	0,
#Deleted in new
chr9	72741151	72741617	chr9:72741151-72741617	7	-	72741151	72741151	16724991	1	466,	0,
#Partially deleted in new
chr9	72792037	72836320	chr9:72792037-72836320	0	+	72792037	72817085	789624	11	28,162,129,68,204,70,240,126,79,52,370,	0,153,13344,24105,25047,26641,28804,34831,38413,38593,43913,
#Partially deleted in new
chr9	72808882	72830519	chr9:72808882-72830519	0	+	72808882	72808882	8553170	5	176,68,240,126,69,	0,7260,11959,17986,21568,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	72871727	72874098	chr9:72871727-72874098	3	-	72871727	72871727	789624	4	293,123,129,83,	0,381,1299,2288,
#Partially deleted in new
chr9	72900661	72953055	chr9:72900661-72953055	3	-	72901207	72953000	0	13	619,75,158,165,185,103,114,129,62,130,141,105,121,	0,5296,8940,11296,16258,18058,23357,24822,26454,28230,30217,39486,52273,
#Partially deleted in new
chr9	72916968	72953056	chr9:72916968-72953056	1	-	72917041	72953000	789624	8	89,44,129,62,130,141,105,122,	0,7120,8515,10147,11923,13910,23179,35966,
#Partially deleted in new
chr9	72923848	72952962	chr9:72923848-72952962	0	-	72923848	72923848	8553170	7	284,129,62,130,141,105,28,	0,1635,3267,5043,7030,16299,29086,
#Partially deleted in new
chr9	72924049	73080442	chr9:72924049-73080442	0	-	72924049	72953000	789624	8	83,129,62,130,141,105,80,76,	0,1434,3066,4842,6829,16098,28885,156317,
#Partially deleted in new
chr9	72925507	73038722	chr9:72925507-73038722	0	-	72925507	72953000	789624	7	105,62,130,141,105,80,182,	0,1608,3384,5371,14640,27427,113033,
#Partially deleted in new
chr9	72926982	72952967	chr9:72926982-72952967	0	-	72926982	72926982	8553170	5	195,130,141,105,33,	0,1909,3896,13165,25952,
#Partially deleted in new
chr9	73042744	73056528	chr9:73042744-73056528	7	+	73042744	73042744	16724991	6	709,124,90,122,87,301,	0,2598,7233,7401,10484,13483,
#Partially deleted in new
chr9	73054054	73080395	chr9:73054054-73080395	0	-	73054054	73054054	8553170	2	180,29,	0,26312,
#Partially deleted in new
chr9	73151756	73170393	chr9:73151756-73170393	3	+	73158535	73170107	0	13	168,80,109,95,114,91,80,57,94,96,59,123,343,	0,6765,6938,7572,8506,9046,11025,11719,13359,14340,15740,17275,18294,
#Partially deleted in new
chr9	73151864	73163500	chr9:73151864-73163500	0	+	73154323	73163500	789624	9	60,145,80,109,95,114,91,80,25,	0,2333,6657,6830,7464,8398,8938,10917,11611,
#Partially deleted in new
chr9	73151864	73159879	chr9:73151864-73159879	0	+	73151864	73151864	8553170	4	60,80,109,551,	0,6657,6830,7464,
#Partially deleted in new
chr9	73151901	73160338	chr9:73151901-73160338	0	+	73158535	73160338	789624	6	23,143,80,109,95,76,	0,2296,6620,6793,7427,8361,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	73157653	73170393	chr9:73157653-73170393	1	+	73158535	73170107	0	12	948,109,95,114,91,80,57,94,96,59,123,343,	0,1041,1675,2609,3149,5128,5822,7462,8443,9843,11378,12397,
#Partially deleted in new
chr9	73160262	73167869	chr9:73160262-73167869	0	+	73160262	73160262	8553170	7	114,91,80,57,94,96,373,	0,540,2519,3213,4853,5834,7234,
#Partially deleted in new
chr9	73160284	73165544	chr9:73160284-73165544	0	+	73160284	73160284	8553170	5	92,91,80,57,429,	0,518,2497,3191,4831,
#Deleted in new
chr9	73168097	73170393	chr9:73168097-73170393	0	+	73168097	73168097	8553170	2	1057,343,	0,1953,
#Deleted in new
chr9	73474377	73476073	chr9:73474377-73476073	7	-	73474377	73474377	16724991	1	1696,	0,
#Deleted in new
chr9	73573614	73579498	chr9:73573614-73579498	3	+	73573614	73573614	8553170	3	230,84,310,	0,4254,5574,
#Partially deleted in new
chr9	73648827	73649839	chr9:73648827-73649839	7	+	73648827	73648827	16724991	1	1012,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	73750971	73751077	chr9:73750971-73751077	7	-	73750971	73750971	16724991	1	106,	0,
#Partially deleted in new
chr9	73870895	73873297	chr9:73870895-73873297	7	-	73870895	73870895	16724991	3	29,367,218,	0,354,2184,
#Partially deleted in new
chr9	74371530	74383530	chr9:74371530-74383530	3	+	74371530	74371530	789624	3	224,316,108,	0,641,11892,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	74497364	74693177	chr9:74497364-74693177	3	+	74497976	74685618	789624	10	619,86,142,402,122,133,108,111,113,7715,	0,132917,137266,145049,163252,165109,168123,170426,174424,188098,
#Partially deleted in new
chr9	74615599	74687201	chr9:74615599-74687201	1	+	74615599	74685618	789624	10	40,86,142,402,122,133,108,111,113,1739,	0,14682,19031,26814,45017,46874,49888,52191,56189,69863,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr9	74722494	74888094	chr9:74722494-74888094	3	-	74724612	74887856	789624	39	2252,107,52,206,83,287,66,51,26,59,92,121,113,1136,133,194,115,175,252,129,147,153,229,278,93,141,54,135,101,73,124,169,172,125,214,178,39,80,271,	0,5744,10190,15912,16872,17228,20066,21600,25394,28169,29782,32858,39201,39504,49208,53388,59867,60184,63379,66119,70129,74246,77759,79403,81299,85539,88320,89804,94174,94397,97809,99174,105283,111503,117529,119671,133032,136174,165329,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr9	74722494	74887347	chr9:74722494-74887347	1	-	74724612	74887248	789624	39	2252,107,52,206,83,287,66,51,26,59,92,121,113,1136,133,194,115,175,252,129,147,153,229,278,93,141,54,135,101,73,124,169,172,125,214,178,39,80,117,	0,5744,10190,15912,16872,17228,20066,21600,25394,28169,29782,32858,39201,39504,49208,53388,59867,60184,63379,66119,70129,74246,77759,79403,81299,85539,88320,89804,94174,94397,97809,99174,105283,111503,117529,119671,133032,136174,164736,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr9	74722494	74887720	chr9:74722494-74887720	1	-	74724612	74887648	789624	39	2252,107,52,206,83,287,66,51,26,59,92,121,113,1136,133,194,115,175,252,129,147,153,229,278,93,141,54,135,101,73,124,169,172,125,214,178,39,80,90,	0,5744,10190,15912,16872,17228,20066,21600,25394,28169,29782,32858,39201,39504,49208,53388,59867,60184,63379,66119,70129,74246,77759,79403,81299,85539,88320,89804,94174,94397,97809,99174,105283,111503,117529,119671,133032,136174,165136,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	74799894	74800222	chr9:74799894-74800222	3	+	74799894	74799894	8553170	1	328,	0,
#Deleted in new
chr9	74804472	74804773	chr9:74804472-74804773	7	+	74804472	74804472	16724991	1	301,	0,
#Partially deleted in new
chr9	74820231	74834057	chr9:74820231-74834057	0	-	74820231	74820231	8553170	4	196,169,172,60,	0,1437,7546,13766,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	74826756	74888094	chr9:74826756-74888094	1	-	74827706	74887856	789624	8	410,251,125,214,178,39,80,271,	0,942,7241,13267,15409,28770,31912,61067,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	74857674	74857781	chr9:74857674-74857781	3	+	74857674	74857674	8553170	1	107,	0,
#Deleted in new
chr9	74935175	74935696	chr9:74935175-74935696	7	+	74935175	74935175	16724991	1	521,	0,
#Partially deleted in new
chr9	74946580	74952886	chr9:74946580-74952886	3	-	74948047	74952611	789624	2	1626,701,	0,5605,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	74952967	74996293	chr9:74952967-74996293	3	+	74952967	74952967	789624	5	150,98,121,54,296,	0,22894,38197,38653,43030,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	74981019	75028394	chr9:74981019-75028394	3	-	74983766	75028241	789624	8	2849,104,114,179,141,164,196,383,	0,3887,15427,17578,18710,35248,36233,46992,
#Partially deleted in new
chr9	74998609	75027099	chr9:74998609-75027099	0	-	74998609	75027099	789624	5	167,141,164,196,47,	0,1120,17658,18643,28443,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	75009827	75016036	chr9:75009827-75016036	3	-	75009827	75009827	8553170	2	378,292,	0,5917,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	75016680	75016848	chr9:75016680-75016848	3	-	75016680	75016680	8553170	1	168,	0,
#Partially deleted in new
chr9	75016848	75028423	chr9:75016848-75028423	1	-	75017216	75028241	789624	2	600,412,	0,11163,
#Partially deleted in new
chr9	75060572	75088190	chr9:75060572-75088190	1	-	75061547	75078366	789624	10	995,84,107,72,148,49,91,257,64,183,	0,6184,8423,9169,9322,16586,16917,17753,22514,27435,
#Partially deleted in new
chr9	75061199	75088209	chr9:75061199-75088209	3	-	75061547	75083115	0	9	368,84,107,72,148,49,91,64,202,	0,5557,7796,8542,8695,15959,16290,21887,26808,
#Partially deleted in new
chr9	75061199	75088217	chr9:75061199-75088217	1	-	75061547	75083115	0	8	368,84,107,148,49,91,64,210,	0,5557,7796,8695,15959,16290,21887,26808,
#Partially deleted in new
chr9	75061199	75067205	chr9:75061199-75067205	0	-	75061199	75061199	8553170	2	368,449,	0,5557,
#Partially deleted in new
chr9	75061201	75088209	chr9:75061201-75088209	0	-	75069890	75083115	789624	7	366,84,1047,49,91,64,202,	0,5555,7794,15957,16288,21885,26806,
#Partially deleted in new
chr9	75082708	75087811	chr9:75082708-75087811	0	-	75082708	75082708	8553170	2	442,161,	0,4942,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	75087543	75088135	chr9:75087543-75088135	0	-	75087543	75087543	8553170	2	325,128,	0,464,
#Partially deleted in new
chr9	75088542	75147265	chr9:75088542-75147265	3	+	75088692	75146741	0	10	184,47,51,64,54,108,50,79,99,583,	0,28961,39026,42035,43227,44751,45803,48995,52291,58140,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	75181519	75181621	chr9:75181519-75181621	3	-	75181519	75181519	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	75198070	75198177	chr9:75198070-75198177	3	+	75198070	75198070	8553170	1	107,	0,
#Deleted in new
chr9	75401888	75402992	chr9:75401888-75402992	7	-	75401888	75401888	16724991	1	1104,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	75579668	75588548	chr9:75579668-75588548	3	+	75579668	75579668	8553170	2	138,320,	0,8560,
#Deleted in new
chr9	75724221	75724575	chr9:75724221-75724575	7	-	75724221	75724221	16724991	1	354,	0,
#Boundary problem: need 37, got 0, diff 37, mapped 0.0
chr9	75890643	76362339	chr9:75890643-76362339	1	+	75891181	76358922	789624	37	730,105,114,144,77,89,173,213,101,104,118,189,137,144,103,194,85,98,130,116,103,137,207,69,43,137,201,84,196,218,237,231,178,218,101,187,3827,	0,41735,95488,133094,136317,177311,181082,205246,216607,243465,266401,268339,279060,284342,288952,290754,294029,297934,298450,298987,336859,342816,348315,349972,401589,404631,406021,418001,420012,430778,432408,437365,441789,447586,460184,463389,467869,
#Partially deleted in new
chr9	75890669	76175562	chr9:75890669-76175562	1	+	75891181	76175302	789624	14	704,105,114,144,77,89,173,213,101,104,118,189,137,577,	0,41709,95462,133068,136291,177285,181056,205220,216581,243439,266375,268313,279034,284316,
#Partially deleted in new
chr9	75890704	76195889	chr9:75890704-76195889	3	+	75891181	76193352	789624	21	669,105,114,144,77,89,173,213,101,104,118,189,137,144,103,194,85,98,130,116,2653,	0,41674,95427,133033,136256,177250,181021,205185,216546,243404,266340,268278,278999,284281,288891,290693,293968,297873,298389,298926,302532,
#Partially deleted in new
chr9	76095976	76358970	chr9:76095976-76358970	0	+	76095976	76358922	789624	31	126,101,104,118,189,137,144,103,194,85,98,130,116,103,137,207,69,43,137,201,81,84,196,218,237,231,178,218,101,187,458,	0,11274,38132,61068,63006,73727,79009,83619,85421,88696,92601,93117,93654,131526,137483,142982,144639,196256,199298,200688,206160,212668,214679,225445,227075,232032,236456,242253,254851,258056,262536,
#Partially deleted in new
chr9	76188638	76194960	chr9:76188638-76194960	0	+	76188638	76194763	789624	4	37,130,116,220,	0,455,992,6102,
#Partially deleted in new
chr9	76286493	76288081	chr9:76286493-76288081	7	-	76286493	76286493	16724991	2	956,321,	0,1267,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	76385516	76394505	chr9:76385516-76394505	3	-	76387398	76394171	0	4	2013,103,152,416,	0,3037,6901,8573,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	76385545	76394132	chr9:76385545-76394132	0	-	76388221	76394132	789624	5	1984,104,103,152,43,	0,2637,3008,6872,8544,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	76386980	76393957	chr9:76386980-76393957	0	-	76386980	76386980	8553170	4	549,103,152,158,	0,1573,5437,6819,
#Partially deleted in new
chr9	76387283	76393766	chr9:76387283-76393766	0	-	76387283	76387283	8553170	4	246,103,152,53,	0,1270,5134,6430,
#Partially deleted in new
chr9	76387307	76394517	chr9:76387307-76394517	0	-	76387307	76387307	8553170	3	222,103,428,	0,1246,6782,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	76387583	76394517	chr9:76387583-76394517	0	-	76387583	76387583	8553170	2	1073,428,	0,6506,
#Partially deleted in new
chr9	76398698	76399586	chr9:76398698-76399586	7	+	76398698	76398698	16724991	1	888,	0,
#Partially deleted in new
chr9	76419849	76502416	chr9:76419849-76502416	0	+	76419849	76419849	8553170	4	38,146,179,178,	0,81066,81903,82389,
#Partially deleted in new
chr9	76419933	76420631	chr9:76419933-76420631	7	+	76419933	76419933	16724991	2	279,60,	0,638,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	76441665	76507414	chr9:76441665-76507414	3	+	76502381	76503668	789624	3	650,146,5176,	0,59250,60573,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	76459151	76507414	chr9:76459151-76507414	1	+	76502381	76503668	789624	3	154,146,5176,	0,41764,43087,
#Partially deleted in new
chr9	76459221	76502469	chr9:76459221-76502469	0	+	76459221	76459221	8553170	3	84,146,231,	0,41694,43017,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	76459229	76507416	chr9:76459229-76507416	1	+	76502381	76503668	789624	4	76,118,146,5178,	0,830,41686,43009,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	76459282	76651203	chr9:76459282-76651203	0	+	76459282	76459282	8553170	13	23,118,142,263,80,235,127,142,94,99,93,262,1251,	0,777,56245,57231,68533,105095,106406,146567,149966,172114,182911,185435,190670,
#Deleted in new
chr9	76549281	76549771	chr9:76549281-76549771	7	-	76549281	76549281	16724991	1	490,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	76611375	76692193	chr9:76611375-76692193	0	-	76614569	76692141	789624	11	3225,48,39,99,87,132,103,174,201,80,120,	0,7964,13076,17816,25095,26042,26810,33363,41107,44047,80698,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	76611375	76692200	chr9:76611375-76692200	0	-	76611375	76611375	8553170	7	2002,11,103,174,201,80,127,	0,26163,26810,33363,41107,44047,80698,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	76611376	76692200	chr9:76611376-76692200	1	-	76613348	76655480	789624	7	1997,15,103,174,201,80,127,	0,26158,26809,33362,41106,44046,80697,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr9	76611376	76906087	chr9:76611376-76906087	3	-	76614569	76905963	789624	19	3224,48,39,99,87,132,103,171,201,80,763,6598,159,95,153,164,203,105,160,	0,7963,13075,17815,25094,26041,26809,33362,41106,44046,91960,93384,102186,212255,215203,235138,239086,242727,294551,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr9	76611480	76906041	chr9:76611480-76906041	1	-	76614569	76711196	789624	19	3120,48,39,99,87,132,103,174,201,80,763,6598,159,95,153,164,203,105,114,	0,7859,12971,17711,24990,25937,26705,33258,41002,43942,91856,93280,102082,212151,215099,235034,238982,242623,294447,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr9	76611480	76906041	chr9:76611480-76906041	1	-	76614569	76905963	789624	18	3120,99,87,132,103,9,171,201,80,763,6598,159,95,153,164,203,105,114,	0,17711,24990,25937,26705,30491,33258,41002,43942,91856,93280,102082,212151,215099,235034,238982,242623,294447,
#Partially deleted in new
chr9	76614007	76615162	chr9:76614007-76615162	0	-	76614007	76614007	8553170	2	593,66,	0,1089,
#Partially deleted in new
chr9	76614288	76710237	chr9:76614288-76710237	0	-	76614569	76710237	789624	11	312,99,87,132,103,9,171,201,80,763,5477,	0,14903,22182,23129,23897,27683,30450,38194,41134,89048,90472,
#Partially deleted in new
chr9	76614449	76652549	chr9:76614449-76652549	0	-	76614569	76652549	789624	10	151,48,36,99,87,132,103,9,171,67,	0,4890,10573,14742,22021,22968,23736,27522,30289,38033,
#Deleted in new
chr9	76641946	76645138	chr9:76641946-76645138	0	-	76641946	76641946	8553170	2	34,400,	0,2792,
#Partially deleted in new
chr9	76644496	76692167	chr9:76644496-76692167	0	-	76644496	76644496	8553170	4	416,201,80,94,	0,7986,10926,47577,
#Partially deleted in new
chr9	76651967	76703438	chr9:76651967-76703438	0	-	76651967	76651967	8553170	3	716,80,102,	0,3455,51369,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	76691979	76737287	chr9:76691979-76737287	0	+	76691979	76691979	8553170	2	1032,788,	0,44520,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	76692009	76785686	chr9:76692009-76785686	1	+	76692009	76692009	8553170	4	1002,40,116,1571,	0,11909,44490,92106,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	76692286	76760032	chr9:76692286-76760032	1	+	76692286	76692286	8553170	7	725,140,116,71,138,67,1510,	0,41303,44213,45429,46372,56376,66236,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	76700179	76740086	chr9:76700179-76740086	1	+	76700179	76700179	8553170	2	83,3587,	0,36320,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	76704792	76819405	chr9:76704792-76819405	1	+	76704792	76704792	8553170	7	764,116,183,128,59,95,84,	0,31707,78912,103790,104089,112953,114529,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	76704820	76785677	chr9:76704820-76785677	0	+	76704820	76704820	8553170	3	736,116,1973,	0,31679,78884,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	76704820	76863307	chr9:76704820-76863307	1	+	76704820	76704820	8553170	6	736,116,128,59,145,1190,	0,31679,103762,104061,151616,157297,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	76704820	76740410	chr9:76704820-76740410	0	+	76704820	76704820	8553170	4	736,140,116,1752,	0,28769,31679,33838,
#Deleted in new
chr9	76704847	76710661	chr9:76704847-76710661	0	+	76704847	76704847	8553170	2	709,129,	0,5685,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	76705057	76785677	chr9:76705057-76785677	0	+	76705057	76705057	8553170	5	499,116,138,183,1562,	0,31442,33601,78647,79058,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	76705091	76819356	chr9:76705091-76819356	0	+	76705091	76705091	8553170	6	465,116,128,59,95,35,	0,31408,103491,103790,112654,114230,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	76736605	76863019	chr9:76736605-76863019	2	+	76736605	76736605	8553170	4	10,128,59,902,	0,71977,72276,125512,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	76764435	76787569	chr9:76764435-76787569	1	+	76764435	76764435	789624	4	120,165,183,3454,	0,18232,19269,19680,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	76764437	76787549	chr9:76764437-76787549	1	+	76764437	76764437	789624	3	118,183,3434,	0,19267,19678,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	76764458	76778931	chr9:76764458-76778931	0	+	76764458	76764458	8553170	2	97,537,	0,13936,
#Partially deleted in new
chr9	76764503	76784157	chr9:76764503-76784157	0	+	76764503	76764503	8553170	2	52,270,	0,19384,
#Deleted in new
chr9	76779656	76779917	chr9:76779656-76779917	3	+	76779656	76779656	8553170	1	261,	0,
#Deleted in new
chr9	76785781	76786190	chr9:76785781-76786190	3	+	76785781	76785781	8553170	1	409,	0,
#Partially deleted in new
chr9	76788343	76906085	chr9:76788343-76906085	1	-	76788393	76905963	789624	7	191,95,153,164,203,105,158,	0,35288,38236,58171,62119,65760,117584,
#Partially deleted in new
chr9	76823247	76906087	chr9:76823247-76906087	0	-	76823247	76823247	8553170	6	479,153,164,203,105,160,	0,3332,23267,27215,30856,82680,
#Partially deleted in new
chr9	76846598	76869182	chr9:76846598-76869182	0	-	76846598	76846598	8553170	4	80,203,105,247,	0,3864,7505,22337,
#Deleted in new
chr9	76931260	76932066	chr9:76931260-76932066	7	-	76931260	76931260	16724991	1	806,	0,
#Deleted in new
chr9	76970321	76971028	chr9:76970321-76971028	7	+	76970321	76970321	16724991	2	193,383,	0,324,
#Partially deleted in new
chr9	76992098	76993108	chr9:76992098-76993108	7	+	76992098	76992098	16724991	2	419,313,	0,697,
#Deleted in new
chr9	77019654	77020953	chr9:77019654-77020953	3	+	77019654	77020953	789624	1	1299,	0,
#Deleted in new
chr9	77040415	77040673	chr9:77040415-77040673	7	+	77040415	77040415	16724991	1	258,	0,
#Partially deleted in new
chr9	77072099	77073295	chr9:77072099-77073295	7	+	77072099	77072099	16724991	2	256,618,	0,578,
#Deleted in new
chr9	77176759	77177994	chr9:77176759-77177994	0	-	77176759	77176759	789624	2	147,368,	0,867,
#Deleted in new
chr9	77176759	77178180	chr9:77176759-77178180	3	-	77176759	77176759	8553170	2	147,554,	0,867,
#Partially deleted in new
chr9	77177352	77383006	chr9:77177352-77383006	1	+	77177704	77382299	789624	69	452,44,43,96,102,110,60,60,81,58,128,107,172,63,133,95,143,190,115,137,133,118,139,85,155,157,80,60,154,117,104,168,305,148,154,128,170,218,233,93,357,102,159,256,161,104,283,396,105,147,129,134,130,233,154,147,82,70,106,114,146,82,114,76,164,46,124,112,728,	0,22592,24012,27960,28625,32070,33263,35616,35881,36976,42601,42924,43832,48573,49113,50038,50769,60649,60919,69906,72744,74882,82733,95927,98145,98712,102806,104514,104768,106002,106194,115988,118189,125562,130592,136639,137142,137900,138821,140253,140882,142219,143816,144138,145714,154657,159902,162163,162825,163051,166800,167656,173964,176056,179361,180339,181004,181980,183183,188107,189374,190702,191946,192904,193062,193537,193673,204623,204926,
#Partially deleted in new
chr9	77177444	77421541	chr9:77177444-77421541	3	+	77177704	77416006	789624	72	360,44,43,96,102,110,60,60,81,58,128,107,172,63,133,95,143,190,115,137,133,118,139,85,155,157,80,60,154,117,104,168,305,148,154,128,170,218,233,93,357,102,159,256,161,104,283,396,105,147,129,134,130,233,154,147,82,70,106,114,146,82,114,76,164,46,124,112,86,124,75,5586,	0,22500,23920,27868,28533,31978,33171,35524,35789,36884,42509,42832,43740,48481,49021,49946,50677,60557,60827,69814,72652,74790,82641,95835,98053,98620,102714,104422,104676,105910,106102,115896,118097,125470,130500,136547,137050,137808,138729,140161,140790,142127,143724,144046,145622,154565,159810,162071,162733,162959,166708,167564,173872,175964,179269,180247,180912,181888,183091,188015,189282,190610,191854,192812,192970,193445,193581,204531,225791,228419,230088,238511,
#Partially deleted in new
chr9	77177444	77417483	chr9:77177444-77417483	1	+	77177704	77416006	789624	71	360,44,43,96,102,110,60,60,81,58,128,107,172,63,133,95,143,190,115,137,133,118,139,85,155,157,80,60,154,104,168,305,148,154,128,170,218,233,93,357,102,159,256,161,104,283,396,105,147,129,134,130,233,154,147,82,70,106,114,146,82,114,76,164,46,124,112,86,124,75,1528,	0,22500,23920,27868,28533,31978,33171,35524,35789,36884,42509,42832,43740,48481,49021,49946,50677,60557,60827,69814,72652,74790,82641,95835,98053,98620,102714,104422,104676,106102,115896,118097,125470,130500,136547,137050,137808,138729,140161,140790,142127,143724,144046,145622,154565,159810,162071,162733,162959,166708,167564,173872,175964,179269,180247,180912,181888,183091,188015,189282,190610,191854,192812,192970,193445,193581,204531,225791,228419,230088,238511,
#Partially deleted in new
chr9	77177533	77385191	chr9:77177533-77385191	1	+	77177704	77384683	789624	69	271,44,43,96,102,110,60,60,81,58,128,107,172,63,133,95,143,190,115,137,133,118,139,85,155,157,80,60,154,117,104,168,305,148,154,128,170,218,233,93,357,102,159,256,161,104,283,396,105,147,129,134,130,233,154,147,82,70,106,114,146,82,114,76,164,46,124,112,607,	0,22411,23831,27779,28444,31889,33082,35435,35700,36795,42420,42743,43651,48392,48932,49857,50588,60468,60738,69725,72563,74701,82552,95746,97964,98531,102625,104333,104587,105821,106013,115807,118008,125381,130411,136458,136961,137719,138640,140072,140701,142038,143635,143957,145533,154476,159721,161982,162644,162870,166619,167475,173783,175875,179180,180158,180823,181799,183002,187926,189193,190521,191765,192723,192881,193356,193492,204442,207051,
#Partially deleted in new
chr9	77177535	77385191	chr9:77177535-77385191	1	+	77177704	77384683	789624	69	269,44,43,96,102,110,60,60,81,58,128,107,172,63,133,95,143,190,115,137,133,118,139,85,155,157,80,60,154,117,104,168,305,148,154,128,170,218,233,93,357,102,159,256,161,104,283,396,105,147,129,134,130,233,154,147,82,70,106,114,146,82,114,76,164,46,124,112,607,	0,22409,23829,27777,28442,31887,33080,35433,35698,36793,42418,42741,43649,48390,48930,49855,50586,60466,60736,69723,72561,74699,82550,95744,97962,98529,102623,104331,104585,105819,106011,115805,118006,125379,130409,136456,136959,137717,138638,140070,140699,142036,143633,143955,145531,154474,159719,161980,162642,162868,166617,167473,173781,175873,179178,180156,180821,181797,183000,187924,189191,190519,191763,192721,192879,193354,193490,204440,207049,
#Partially deleted in new
chr9	77177535	77421541	chr9:77177535-77421541	1	+	77177704	77416006	789624	72	269,44,43,96,102,110,60,60,81,58,128,107,172,63,133,95,143,190,115,137,133,118,139,85,155,157,80,60,154,117,104,168,305,148,154,128,170,218,233,93,357,102,159,256,161,104,283,396,105,147,129,134,130,233,154,147,82,70,106,114,146,82,114,76,164,46,124,112,86,124,75,5586,	0,22409,23829,27777,28442,31887,33080,35433,35698,36793,42418,42741,43649,48390,48930,49855,50586,60466,60736,69723,72561,74699,82550,95744,97962,98529,102623,104331,104585,105819,106011,115805,118006,125379,130409,136456,136959,137717,138638,140070,140699,142036,143633,143955,145531,154474,159719,161980,162642,162868,166617,167473,173781,175873,179178,180156,180821,181797,183000,187924,189191,190519,191763,192721,192879,193354,193490,204440,225700,228328,229997,238420,
#Partially deleted in new
chr9	77177535	77383006	chr9:77177535-77383006	1	+	77177704	77382299	789624	69	269,44,43,96,102,110,60,60,81,58,128,107,172,63,133,95,143,190,115,137,133,118,139,85,155,157,80,60,154,117,104,168,305,148,154,128,170,218,233,93,357,102,159,256,161,104,283,396,105,147,129,134,130,233,154,147,82,70,106,114,146,82,114,76,164,46,124,112,728,	0,22409,23829,27777,28442,31887,33080,35433,35698,36793,42418,42741,43649,48390,48930,49855,50586,60466,60736,69723,72561,74699,82550,95744,97962,98529,102623,104331,104585,105819,106011,115805,118006,125379,130409,136456,136959,137717,138638,140070,140699,142036,143633,143955,145531,154474,159719,161980,162642,162868,166617,167473,173781,175873,179178,180156,180821,181797,183000,187924,189191,190519,191763,192721,192879,193354,193490,204440,204743,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	77209487	77211617	chr9:77209487-77211617	0	+	77209487	77209487	8553170	3	45,60,405,	0,1128,1725,
#Partially deleted in new
chr9	77279845	77319670	chr9:77279845-77319670	0	+	77279845	77279845	8553170	17	114,80,60,154,117,104,168,305,148,154,128,170,218,233,93,357,99,	0,313,2021,2275,3509,3701,13495,15696,23069,28099,34146,34649,35407,36328,37760,38389,39726,
#Partially deleted in new
chr9	77293493	77319670	chr9:77293493-77319670	0	+	77293493	77305622	789624	12	15,305,148,81,154,128,170,218,233,93,357,99,	0,2048,9421,12063,14451,20498,21001,21759,22680,24112,24741,26078,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	77318520	77339182	chr9:77318520-77339182	0	+	77318520	77337552	789624	7	71,102,159,256,161,104,1928,	0,1051,2648,2970,4546,13489,18734,
#Deleted in new
chr9	77340200	77340711	chr9:77340200-77340711	0	+	77340200	77340200	8553170	2	82,308,	0,203,
#Partially deleted in new
chr9	77350916	77353631	chr9:77350916-77353631	0	+	77350916	77350916	8553170	2	530,223,	0,2492,
#Partially deleted in new
chr9	77389710	77416393	chr9:77389710-77416393	0	+	77389710	77389710	8553170	5	432,86,124,75,438,	0,13525,16153,17822,26245,
#Partially deleted in new
chr9	77389994	77417625	chr9:77389994-77417625	0	+	77389994	77389994	8553170	6	148,159,86,124,75,1670,	0,5715,13241,15869,17538,25961,
#Partially deleted in new
chr9	77405967	77416132	chr9:77405967-77416132	0	+	77405967	77407637	789624	3	20,127,177,	0,1565,9988,
#Partially deleted in new
chr9	77423078	77648307	chr9:77423078-77648307	3	-	77423978	77647793	789624	7	1091,154,130,129,155,185,638,	0,2483,5828,8242,11289,105990,224591,
#Partially deleted in new
chr9	77424127	77431688	chr9:77424127-77431688	0	-	77424127	77424127	8553170	4	42,154,130,368,	0,1434,4779,7193,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	77456294	77526697	chr9:77456294-77526697	3	+	77456294	77456294	789624	4	228,102,78,197,	0,61148,61727,70206,
#Deleted in new
chr9	77580244	77580628	chr9:77580244-77580628	7	+	77580244	77580244	16724991	1	384,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	77635202	77635309	chr9:77635202-77635309	3	-	77635202	77635202	8553170	1	107,	0,
#Partially deleted in new
chr9	77716086	78031458	chr9:77716086-78031458	3	-	77721322	78031235	789624	7	5427,154,130,129,155,185,359,	0,12427,78376,81433,99529,206074,315013,
#Partially deleted in new
chr9	77797527	78030604	chr9:77797527-78030604	0	-	77797527	78030563	789624	4	121,155,185,90,	0,18088,124633,232987,
#Deleted in new
chr9	78150531	78151193	chr9:78150531-78151193	7	-	78150531	78150531	16724991	1	662,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	78165464	78165778	chr9:78165464-78165778	3	+	78165464	78165464	8553170	1	314,	0,
#Deleted in new
chr9	78178262	78179512	chr9:78178262-78179512	7	+	78178262	78178262	16724991	1	1250,	0,
#Deleted in new
chr9	78180213	78180693	chr9:78180213-78180693	7	-	78180213	78180213	16724991	1	480,	0,
#Deleted in new
chr9	78219119	78219357	chr9:78219119-78219357	7	+	78219119	78219119	16724991	1	238,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr9	78236061	78279690	chr9:78236061-78279690	1	+	78236350	78270851	789624	16	542,173,73,104,175,114,65,112,136,46,129,78,167,172,262,8850,	0,3961,4230,5634,7400,10607,12229,12700,15846,17170,18774,26845,28088,29310,30380,34779,
#Partially deleted in new
chr9	78236064	78266994	chr9:78236064-78266994	1	+	78236350	78266762	789624	16	539,173,73,104,175,114,65,112,136,46,129,78,167,172,48,553,	0,3958,4227,5631,7397,10604,12226,12697,15843,17167,18771,26842,28085,29307,29794,30377,
#Partially deleted in new
chr9	78236071	78267025	chr9:78236071-78267025	1	+	78236350	78266762	789624	16	532,173,73,104,175,114,65,112,18,136,46,129,78,167,172,584,	0,3951,4220,5624,7390,10597,12219,12690,14174,15836,17160,18764,26835,28078,29300,30370,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr9	78236079	78273565	chr9:78236079-78273565	0	+	78236350	78236611	789624	16	580,173,104,175,114,65,112,139,46,129,78,167,172,48,262,2725,	0,3943,5616,7382,10589,12211,12682,15825,17152,18756,26827,28070,29292,29779,30362,34761,
#Partially deleted in new
chr9	78236079	78271648	chr9:78236079-78271648	1	+	78236350	78270851	789624	17	524,173,73,104,175,114,65,112,18,139,46,129,78,167,172,262,808,	0,3943,4212,5616,7382,10589,12211,12682,14166,15825,17152,18756,26827,28070,29292,30362,34761,
#Partially deleted in new
chr9	78236080	78250453	chr9:78236080-78250453	0	+	78236080	78236080	8553170	8	579,173,73,104,175,114,65,1692,	0,3942,4211,5615,7381,10588,12210,12681,
#Partially deleted in new
chr9	78236100	78271245	chr9:78236100-78271245	0	+	78236350	78236611	789624	17	559,173,73,104,175,114,65,112,18,136,46,129,78,167,172,262,405,	0,3922,4191,5595,7361,10568,12190,12661,14145,15807,17131,18735,26806,28049,29271,30341,34740,
#Partially deleted in new
chr9	78236104	78271676	chr9:78236104-78271676	1	+	78236350	78270851	789624	17	499,173,73,104,175,65,112,18,136,46,129,78,167,172,48,262,836,	0,3918,4187,5591,7357,12186,12657,14141,15803,17127,18731,26802,28045,29267,29754,30337,34736,
#Partially deleted in new
chr9	78236107	78267004	chr9:78236107-78267004	1	+	78236350	78266762	789624	17	496,173,73,104,175,114,65,112,18,136,46,129,78,167,172,48,563,	0,3915,4184,5588,7354,10561,12183,12654,14138,15800,17124,18728,26799,28042,29264,29751,30334,
#Partially deleted in new
chr9	78236109	78271214	chr9:78236109-78271214	1	+	78236350	78270851	789624	17	494,173,73,104,175,114,65,112,136,46,129,78,167,172,48,262,374,	0,3913,4182,5586,7352,10559,12181,12652,15798,17122,18726,26797,28040,29262,29749,30332,34731,
#Partially deleted in new
chr9	78236140	78266787	chr9:78236140-78266787	0	+	78236140	78236140	8553170	2	463,171,	0,30476,
#Partially deleted in new
chr9	78236161	78267075	chr9:78236161-78267075	1	+	78236350	78266762	789624	15	442,173,73,104,175,114,65,112,139,46,129,78,167,172,634,	0,3861,4130,5534,7300,10507,12129,12600,15743,17070,18674,26745,27988,29210,30280,
#Partially deleted in new
chr9	78236206	78267075	chr9:78236206-78267075	1	+	78236350	78266762	789624	16	397,173,73,104,175,114,65,112,139,46,129,78,167,172,48,634,	0,3816,4085,5489,7255,10462,12084,12555,15698,17025,18629,26700,27943,29165,29652,30235,
#Partially deleted in new
chr9	78236231	78267067	chr9:78236231-78267067	1	+	78236350	78266762	789624	15	372,173,73,104,175,114,65,112,136,46,129,78,167,172,626,	0,3791,4060,5464,7230,10437,12059,12530,15676,17000,18604,26675,27918,29140,30210,
#Partially deleted in new
chr9	78236269	78266931	chr9:78236269-78266931	1	+	78236350	78266762	789624	15	334,173,73,104,175,114,65,112,139,46,129,78,167,172,490,	0,3753,4022,5426,7192,10399,12021,12492,15635,16962,18566,26637,27880,29102,30172,
#Partially deleted in new
chr9	78236296	78266802	chr9:78236296-78266802	1	+	78236350	78266762	789624	15	307,173,73,104,175,114,65,112,18,136,46,129,167,172,361,	0,3726,3995,5399,7165,10372,11994,12465,13949,15611,16935,18539,27853,29075,30145,
#Partially deleted in new
chr9	78236333	78266726	chr9:78236333-78266726	0	+	78236350	78266726	789624	17	270,173,73,104,175,114,65,112,18,139,46,129,78,167,172,48,285,	0,3689,3958,5362,7128,10335,11957,12428,13912,15571,16898,18502,26573,27816,29038,29525,30108,
#Partially deleted in new
chr9	78236350	78271177	chr9:78236350-78271177	3	+	78236350	78270851	789624	18	253,173,73,104,175,114,65,112,18,136,46,129,78,167,172,48,262,337,	0,3672,3941,5345,7111,10318,11940,12411,13895,15557,16881,18485,26556,27799,29021,29508,30091,34490,
#Partially deleted in new
chr9	78236350	78266988	chr9:78236350-78266988	0	+	78236350	78236611	789624	15	309,173,73,104,175,65,112,136,46,129,78,167,172,48,547,	0,3672,3941,5345,7111,11940,12411,15557,16881,18485,26556,27799,29021,29508,30091,
#Partially deleted in new
chr9	78236371	78266564	chr9:78236371-78266564	0	+	78236371	78236611	789624	16	288,173,73,104,175,114,65,112,136,46,129,78,167,172,48,123,	0,3651,3920,5324,7090,10297,11919,12390,15536,16860,18464,26535,27778,29000,29487,30070,
#Partially deleted in new
chr9	78253306	78264228	chr9:78253306-78264228	0	+	78253306	78253306	8553170	4	636,122,78,79,	0,1536,9600,10843,
#Partially deleted in new
chr9	78254473	78264241	chr9:78254473-78264241	0	+	78254473	78254473	8553170	3	491,78,92,	0,8433,9676,
#Partially deleted in new
chr9	78254702	78265401	chr9:78254702-78265401	0	+	78254702	78254702	8553170	3	262,167,30,	0,9447,10669,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	78264049	78271883	chr9:78264049-78271883	0	+	78264049	78264049	8553170	4	267,172,262,1043,	0,1322,2392,6791,
#Partially deleted in new
chr9	78297142	78329454	chr9:78297142-78329454	1	+	78297210	78329086	0	8	128,61,70,206,173,170,129,474,	0,3459,4811,7592,9171,11271,20533,31838,
#Partially deleted in new
chr9	78297142	78330093	chr9:78297142-78330093	3	+	78297210	78329086	0	9	128,61,70,206,173,170,129,138,1113,	0,3459,4811,7592,9171,11271,20533,30908,31838,
#Partially deleted in new
chr9	78589157	78589539	chr9:78589157-78589539	7	+	78589157	78589157	16724991	1	382,	0,
#Deleted in new
chr9	78741719	78742744	chr9:78741719-78742744	7	-	78741719	78741719	16724991	1	1025,	0,
#Deleted in new
chr9	79036412	79037568	chr9:79036412-79037568	7	-	79036412	79036412	16724991	1	1156,	0,
#Partially deleted in new
chr9	79135421	79145674	chr9:79135421-79145674	1	-	79135421	79135421	789624	5	1756,188,255,55,178,	0,3101,3366,7755,10075,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	79135436	79198314	chr9:79135436-79198314	3	-	79135436	79135436	8553170	7	176,551,188,55,149,106,148,	0,1190,3086,7740,47749,56131,62730,
#Deleted in new
chr9	79391303	79391759	chr9:79391303-79391759	7	+	79391303	79391303	16724991	1	456,	0,
#Partially deleted in new
chr9	79505803	79532342	chr9:79505803-79532342	0	-	79505803	79505803	8553170	2	202,126,	0,26413,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	79505857	79506999	chr9:79505857-79506999	1	-	79505857	79505857	8553170	2	148,441,	0,701,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	79515642	79532342	chr9:79515642-79532342	3	-	79515642	79515642	8553170	2	2806,126,	0,16574,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	79517952	79532321	chr9:79517952-79532321	0	-	79517952	79517952	8553170	3	496,255,105,	0,9657,14264,
#Partially deleted in new
chr9	79571772	79726882	chr9:79571772-79726882	1	+	79572790	79725144	789624	18	1063,98,64,45,63,75,202,17,120,133,194,77,250,248,148,151,77,1846,	0,1916,3100,4360,40883,55601,80820,82286,133010,136345,136820,137850,146949,148273,149968,150678,151186,153264,
#Partially deleted in new
chr9	79571772	79725499	chr9:79571772-79725499	3	+	79572790	79725144	789624	20	1063,98,64,45,63,75,202,17,120,54,153,133,194,77,250,248,148,151,77,463,	0,1916,3100,4360,40883,55601,80820,82286,133010,134116,134974,136345,136820,137850,146949,148273,149968,150678,151186,153264,
#Deleted in new
chr9	79571940	79576802	chr9:79571940-79576802	0	+	79572790	79576231	789624	5	895,98,64,151,328,	0,1748,2932,4192,4534,
#Partially deleted in new
chr9	79572591	79704801	chr9:79572591-79704801	0	+	79572790	79704801	789624	10	244,98,64,45,63,75,39,209,17,19,	0,1097,2281,3541,40064,54782,77228,79998,81467,132191,
#Partially deleted in new
chr9	79572610	79652629	chr9:79572610-79652629	0	+	79572790	79652629	789624	6	225,98,64,63,75,40,	0,1078,2262,40045,54763,79979,
#Partially deleted in new
chr9	79572614	79725343	chr9:79572614-79725343	1	+	79572790	79725144	789624	21	221,98,64,45,63,75,202,17,120,54,153,96,133,194,77,250,248,148,151,77,307,	0,1074,2258,3518,40041,54759,79978,81444,132168,133274,134132,134508,135503,135978,137008,146107,147431,149126,149836,150344,152422,
#Partially deleted in new
chr9	79572624	79725340	chr9:79572624-79725340	0	+	79572790	79704823	789624	21	211,98,64,45,63,75,202,17,130,120,54,153,133,194,77,250,248,148,151,77,304,	0,1064,2248,3508,40031,54749,79968,81434,98584,132158,133264,134122,135493,135968,136998,146097,147421,149116,149826,150334,152412,
#Deleted in new
chr9	79572633	79580118	chr9:79572633-79580118	0	+	79572633	79572633	8553170	5	202,98,64,45,59,	0,1055,2239,3499,7426,
#Deleted in new
chr9	79572637	79580185	chr9:79572637-79580185	0	+	79572637	79572637	8553170	4	198,98,64,126,	0,1051,2235,7422,
#Deleted in new
chr9	79572711	79575029	chr9:79572711-79575029	0	+	79572711	79572711	8553170	3	124,98,157,	0,977,2161,
#Partially deleted in new
chr9	79572744	79725233	chr9:79572744-79725233	1	+	79572790	79725144	789624	19	91,98,64,45,63,202,17,120,54,153,133,194,77,250,248,148,151,77,197,	0,944,2128,3388,39911,79848,81314,132038,133144,134002,135373,135848,136878,145977,147301,148996,149706,150214,152292,
#Partially deleted in new
chr9	79573261	79652794	chr9:79573261-79652794	0	+	79573331	79652794	789624	7	109,98,64,45,63,75,202,	0,427,1611,2871,39394,54112,79331,
#Partially deleted in new
chr9	79573296	79627752	chr9:79573296-79627752	0	+	79573296	79573296	8553170	6	74,98,64,45,63,379,	0,392,1576,2836,39359,54077,
#Partially deleted in new
chr9	79573502	79627448	chr9:79573502-79627448	0	+	79573502	79573502	8553170	5	284,64,45,63,75,	0,1370,2630,39153,53871,
#Partially deleted in new
chr9	79573688	79708250	chr9:79573688-79708250	0	+	79573688	79708250	789624	11	98,64,45,63,75,202,17,120,54,96,133,	0,1184,2444,38967,53685,78904,80370,131094,132200,133434,134429,
#Partially deleted in new
chr9	79573932	79652799	chr9:79573932-79652799	0	+	79573932	79573932	8553170	6	264,64,45,63,75,207,	0,940,2200,38723,53441,78660,
#Partially deleted in new
chr9	79575778	79652737	chr9:79575778-79652737	0	+	79575778	79575778	8553170	4	249,63,75,148,	0,36877,51595,76811,
#Partially deleted in new
chr9	79575779	79652703	chr9:79575779-79652703	0	+	79575779	79575779	8553170	4	248,45,63,114,	0,353,36876,76810,
#Partially deleted in new
chr9	79580226	79649724	chr9:79580226-79649724	0	+	79580226	79580226	8553170	3	146,75,244,	0,47147,69254,
#Partially deleted in new
chr9	79652592	79708783	chr9:79652592-79708783	0	+	79652592	79708783	789624	6	202,17,120,54,133,191,	0,1466,52190,53296,55525,56000,
#Partially deleted in new
chr9	79652685	79671557	chr9:79652685-79671557	0	+	79652685	79652685	8553170	3	109,17,349,	0,1373,18523,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	79663449	79708162	chr9:79663449-79708162	0	+	79663449	79663449	8553170	5	154,120,54,153,45,	0,41333,42439,43297,44668,
#Partially deleted in new
chr9	79704644	79708226	chr9:79704644-79708226	0	+	79704644	79704644	8553170	4	258,54,153,109,	0,1244,2102,3473,
#Partially deleted in new
chr9	79704782	79709672	chr9:79704782-79709672	0	+	79704782	79709672	789624	4	120,133,194,50,	0,3335,3810,4840,
#Partially deleted in new
chr9	79704802	79718963	chr9:79704802-79718963	0	+	79704802	79718963	789624	8	100,54,153,133,194,77,75,242,	0,1086,1944,3315,3790,4820,13194,13919,
#Partially deleted in new
chr9	79706765	79709697	chr9:79706765-79709697	0	+	79706765	79709697	789624	5	134,96,133,194,75,	0,357,1352,1827,2857,
#Partially deleted in new
chr9	79708592	79722601	chr9:79708592-79722601	0	+	79708592	79708592	8553170	4	194,77,250,151,	0,1030,10129,13858,
#Deleted in new
chr9	79726068	79726321	chr9:79726068-79726321	7	+	79726068	79726068	16724991	1	253,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	79850870	79851498	chr9:79850870-79851498	7	+	79850870	79850870	16724991	1	628,	0,
#Deleted in new
chr9	79863018	79866875	chr9:79863018-79866875	7	+	79863018	79863018	16724991	1	3857,	0,
#Partially deleted in new
chr9	79874695	79886678	chr9:79874695-79886678	3	-	79874695	79874695	8553170	2	410,114,	0,11869,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	79889000	79892007	chr9:79889000-79892007	3	+	79889000	79889000	8553170	1	3007,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	79913268	79915736	chr9:79913268-79915736	3	+	79913268	79913268	8553170	1	2468,	0,
#Partially deleted in new
chr9	79975022	79990064	chr9:79975022-79990064	3	+	79975022	79975022	8553170	3	200,278,108,	0,531,14934,
#Partially deleted in new
chr9	80030578	80034555	chr9:80030578-80034555	3	+	80030578	80030578	8553170	2	191,255,	0,3722,
#Deleted in new
chr9	80357028	80360338	chr9:80357028-80360338	7	-	80357028	80357028	16724991	1	3310,	0,
#Deleted in new
chr9	80563570	80564630	chr9:80563570-80564630	7	-	80563570	80563570	16724991	1	1060,	0,
#Deleted in new
chr9	80565031	80565962	chr9:80565031-80565962	7	-	80565031	80565031	16724991	1	931,	0,
#Deleted in new
chr9	80782337	80782770	chr9:80782337-80782770	7	-	80782337	80782337	16724991	1	433,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	80869757	80871295	chr9:80869757-80871295	3	-	80869757	80869757	8553170	3	606,62,123,	0,736,1415,
#Deleted in new
chr9	81410278	81410630	chr9:81410278-81410630	7	+	81410278	81410278	16724991	1	352,	0,
#Partially deleted in new
chr9	81488307	81488837	chr9:81488307-81488837	7	+	81488307	81488307	16724991	1	530,	0,
#Partially deleted in new
chr9	81583682	81689305	chr9:81583682-81689305	3	-	81584197	81688240	0	20	623,77,151,148,248,250,77,191,145,153,54,117,17,205,75,63,45,64,101,1089,	0,765,1822,3998,7122,9342,26537,28086,29694,32299,32963,36758,49665,50414,68531,70291,101993,102150,103651,104534,
#Partially deleted in new
chr9	81599864	81613522	chr9:81599864-81613522	1	-	81600088	81613464	789624	4	252,77,191,146,	0,10355,11904,13512,
#Partially deleted in new
chr9	81611805	81620557	chr9:81611805-81620557	0	-	81611805	81611805	8553170	5	154,100,153,54,117,	0,1616,4176,4840,8635,
#Partially deleted in new
chr9	81611842	81620539	chr9:81611842-81620539	0	-	81611842	81611842	8553170	6	114,102,145,114,54,99,	0,449,1534,4178,4803,8598,
#Partially deleted in new
chr9	81620453	81688448	chr9:81620453-81688448	0	-	81620453	81688240	789624	9	104,17,205,105,63,45,64,101,232,	0,12894,13643,31730,33520,65222,65379,66880,67763,
#Partially deleted in new
chr9	81633468	81687368	chr9:81633468-81687368	1	-	81634070	81685853	789624	6	833,75,63,45,64,35,	0,18745,20505,52207,52364,53865,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	81689712	81776900	chr9:81689712-81776900	3	+	81689712	81689712	789624	4	247,112,127,963,	0,58255,59973,86225,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	81725242	81725349	chr9:81725242-81725349	3	-	81725242	81725242	8553170	1	107,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	81747942	81755452	chr9:81747942-81755452	1	+	81747942	81747942	8553170	2	137,411,	0,7099,
#Deleted in new
chr9	81885495	81885598	chr9:81885495-81885598	7	+	81885495	81885495	16724991	1	103,	0,
#Partially deleted in new
chr9	81888917	81888985	chr9:81888917-81888985	3	+	81888917	81888917	8553170	1	68,	0,
#Deleted in new
chr9	81913436	81919926	chr9:81913436-81919926	7	+	81913436	81913436	16724991	4	221,46,61,4535,	0,964,1611,1955,
#Deleted in new
chr9	81913465	81919876	chr9:81913465-81919876	5	+	81913465	81913465	16724991	4	192,46,61,4485,	0,935,1582,1926,
#Deleted in new
chr9	81928020	81931368	chr9:81928020-81931368	3	-	81928020	81928020	8553170	2	205,260,	0,3088,
#Deleted in new
chr9	81928513	81934948	chr9:81928513-81934948	3	+	81928513	81932915	789624	4	186,46,61,4494,	0,942,1586,1941,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	81930225	81977089	chr9:81930225-81977089	3	-	81930225	81930225	8553170	5	1169,97,153,307,482,	0,16164,37310,43715,46382,
#Deleted in new
chr9	81943585	81950038	chr9:81943585-81950038	3	+	81943585	81948007	789624	4	186,46,61,4492,	0,942,1586,1961,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	81946437	81976806	chr9:81946437-81976806	0	-	81946437	81946437	8553170	4	49,153,166,199,	0,21098,27644,30170,
#Partially deleted in new
chr9	81966563	81972130	chr9:81966563-81972130	7	+	81966563	81966563	16724991	3	47,72,4269,	0,977,1298,
#Partially deleted in new
chr9	81977613	82780194	chr9:81977613-82780194	7	+	81977613	81977613	16724991	10	255,75,114,69,45,85,95,103,144,316,	0,295793,299435,303968,372190,448678,450585,514338,519101,802265,
#Deleted in new
chr9	81988771	81995256	chr9:81988771-81995256	3	+	81988818	81995201	789624	4	233,46,70,4484,	0,1006,1645,2001,
#Deleted in new
chr9	81988787	81990148	chr9:81988787-81990148	0	+	81988787	81988787	8553170	2	217,371,	0,990,
#Partially deleted in new
chr9	82057646	82063682	chr9:82057646-82063682	7	-	82057646	82057646	16724991	4	3708,61,58,189,	0,3963,4589,5847,
#Deleted in new
chr9	82086154	82088768	chr9:82086154-82088768	7	-	82086154	82086154	16724991	1	2614,	0,
#Deleted in new
chr9	82130751	82131632	chr9:82130751-82131632	7	+	82130751	82130751	16724991	1	881,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	82272755	82277127	chr9:82272755-82277127	4	+	82272755	82272755	16724991	2	726,79,	0,4293,
#Partially deleted in new
chr9	82273406	82428287	chr9:82273406-82428287	4	+	82273406	82273406	16724991	5	75,114,69,45,89,	0,3642,8175,76397,154792,
#Partially deleted in new
chr9	82273458	82453803	chr9:82273458-82453803	4	+	82273458	82273458	16724991	7	23,114,69,45,45,95,166,	0,3590,8123,76345,153523,154740,180179,
#Partially deleted in new
chr9	82273458	82453443	chr9:82273458-82453443	4	+	82273458	82273458	16724991	8	23,114,69,45,93,85,95,99,	0,3590,8123,76345,123249,152833,154740,179886,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	82273458	82453803	chr9:82273458-82453803	4	+	82273458	82273458	16724991	6	23,114,69,95,127,166,	0,3590,8123,154740,178144,180179,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	82273458	82453729	chr9:82273458-82453729	4	+	82273458	82273458	16724991	8	23,114,69,159,45,95,114,92,	0,3590,8123,23923,76345,154740,179886,180179,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	82273458	82564141	chr9:82273458-82564141	4	+	82273458	82273458	16724991	7	23,114,69,45,93,95,113,	0,3590,8123,76345,123249,154740,290570,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	82273458	82451723	chr9:82273458-82451723	4	+	82273458	82273458	16724991	7	23,114,69,45,85,95,121,	0,3590,8123,76345,152833,154740,178144,
#Partially deleted in new
chr9	82273458	82453803	chr9:82273458-82453803	4	+	82273458	82273458	16724991	7	23,114,69,85,95,114,166,	0,3590,8123,152833,154740,179886,180179,
#Partially deleted in new
chr9	82273458	82453999	chr9:82273458-82453999	4	+	82273458	82273458	16724991	5	23,114,69,95,362,	0,3590,8123,154740,180179,
#Partially deleted in new
chr9	82273458	82536232	chr9:82273458-82536232	4	+	82273458	82273458	16724991	7	23,114,69,45,95,137,179,	0,3590,8123,76345,154740,251060,262595,
#Partially deleted in new
chr9	82273458	82405263	chr9:82273458-82405263	4	+	82273458	82273458	16724991	5	23,114,69,106,152,	0,3590,8123,130120,131653,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	82273459	82449785	chr9:82273459-82449785	4	+	82273459	82273459	16724991	7	22,114,69,159,45,95,145,	0,3589,8122,23922,76344,154739,176181,
#Partially deleted in new
chr9	82277048	82428480	chr9:82277048-82428480	4	+	82277048	82277048	16724991	5	114,69,45,85,282,	0,4533,72755,149243,151150,
#Partially deleted in new
chr9	82277048	82520940	chr9:82277048-82520940	4	+	82277048	82277048	16724991	6	114,69,95,103,144,267,	0,4533,151150,214903,219666,243625,
#Partially deleted in new
chr9	82277048	82524655	chr9:82277048-82524655	4	+	82277048	82277048	16724991	6	114,69,95,103,144,137,	0,4533,151150,214903,219666,247470,
#Deleted in new
chr9	82405187	82406239	chr9:82405187-82406239	3	+	82405187	82405187	8553170	2	123,332,	0,720,
#Deleted in new
chr9	82427349	82428025	chr9:82427349-82428025	7	-	82427349	82427349	16724991	1	676,	0,
#Deleted in new
chr9	82428198	82428293	chr9:82428198-82428293	5	+	82428198	82428198	16724991	1	95,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	82431888	82432905	chr9:82431888-82432905	7	-	82431888	82431888	16724991	1	1017,	0,
#Partially deleted in new
chr9	82451655	82455225	chr9:82451655-82455225	3	+	82451655	82451655	8553170	4	74,114,166,319,	0,1689,1982,3251,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	82491951	82564432	chr9:82491951-82564432	4	+	82491951	82491951	16724991	3	103,144,404,	0,4763,72077,
#Deleted in new
chr9	82543717	82544196	chr9:82543717-82544196	3	+	82543717	82543717	8553170	1	479,	0,
#Deleted in new
chr9	82744066	82744792	chr9:82744066-82744792	7	-	82744066	82744066	16724991	1	726,	0,
#Partially deleted in new
chr9	82979584	83063128	chr9:82979584-83063128	3	-	82982676	83062867	0	17	3198,77,120,115,82,148,138,235,89,85,69,116,78,96,91,147,692,	0,10806,13321,17427,18780,20584,20848,21311,24913,25831,27852,30056,32849,36220,42751,46190,82852,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	83054659	83063177	chr9:83054659-83063177	1	-	83055544	83062867	0	2	1024,741,	0,7777,
#Deleted in new
chr9	83200939	83201228	chr9:83200939-83201228	3	-	83200939	83200939	8553170	1	289,	0,
#Deleted in new
chr9	83201956	83202065	chr9:83201956-83202065	7	+	83201956	83201956	16724991	1	109,	0,
#Partially deleted in new
chr9	83219330	83234242	chr9:83219330-83234242	3	+	83219330	83219330	8553170	3	47,204,193,	0,14385,14719,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	83242989	83267287	chr9:83242989-83267287	1	-	83243201	83267177	789624	3	226,462,276,	0,5065,24022,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	83242989	83331961	chr9:83242989-83331961	1	-	83243201	83331865	789624	10	226,462,125,69,75,89,64,89,88,110,	0,5065,47613,55758,56122,66546,67495,68897,70670,88862,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr9	83242989	83538546	chr9:83242989-83538546	1	-	83243201	83538231	789624	15	226,462,125,69,75,89,64,89,88,124,98,79,43,105,462,	0,5065,47613,55758,56122,66546,67495,68897,70670,92526,100200,106689,129923,146614,295095,
#Partially deleted in new
chr9	83244621	83538438	chr9:83244621-83538438	3	-	83247917	83538231	789624	14	3895,125,69,75,89,64,89,88,124,98,79,43,105,354,	0,45981,54126,54490,64914,65863,67265,69038,90894,98568,105057,128291,144982,293463,
#Partially deleted in new
chr9	83244625	83467742	chr9:83244625-83467742	1	-	83247917	83467632	789624	14	3891,125,69,75,89,64,89,88,124,98,79,43,105,125,	0,45977,54122,54486,64910,65859,67261,69034,90890,98564,105053,128287,144978,222992,
#Partially deleted in new
chr9	83247971	83281608	chr9:83247971-83281608	0	-	83247971	83247971	8553170	2	545,59,	0,33578,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	83272279	83276864	chr9:83272279-83276864	3	+	83272279	83272279	8553170	3	566,116,417,	0,1561,4168,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	83275940	83276114	chr9:83275940-83276114	3	+	83275940	83275940	8553170	1	174,	0,
#Partially deleted in new
chr9	83276375	83279499	chr9:83276375-83279499	1	+	83276375	83276375	8553170	2	184,343,	0,2781,
#Partially deleted in new
chr9	83297531	83311966	chr9:83297531-83311966	0	-	83297770	83311966	789624	6	285,69,75,89,64,80,	0,1216,1580,12004,12953,14355,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	83596443	83596584	chr9:83596443-83596584	3	-	83596443	83596443	8553170	1	141,	0,
#Partially deleted in new
chr9	83623048	83644129	chr9:83623048-83644129	1	+	83628929	83643780	789624	5	173,205,87,44,701,	0,4958,5824,18499,20380,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	83623048	83644130	chr9:83623048-83644130	0	+	83623171	83626729	789624	6	156,603,31,87,44,702,	0,3393,5132,5824,18499,20380,
#Partially deleted in new
chr9	83623146	83643624	chr9:83623146-83643624	0	+	83628929	83643624	789624	5	75,205,87,44,196,	0,4860,5726,18401,20282,
#Partially deleted in new
chr9	83623165	83643870	chr9:83623165-83643870	1	+	83623171	83641590	789624	4	56,87,44,442,	0,5707,18382,20263,
#Partially deleted in new
chr9	83623167	83643767	chr9:83623167-83643767	1	+	83623171	83643533	789624	4	54,31,87,339,	0,5013,5705,20261,
#Partially deleted in new
chr9	83623167	83643904	chr9:83623167-83643904	3	+	83623171	83643780	789624	5	54,31,87,44,476,	0,5013,5705,18380,20261,
#Partially deleted in new
chr9	83659962	83708203	chr9:83659962-83708203	3	-	83661786	83707679	0	11	1977,169,116,84,143,235,159,263,116,152,704,	0,3912,5067,6387,9222,17764,18478,19812,22988,26041,47537,
#Partially deleted in new
chr9	83659970	83686053	chr9:83659970-83686053	0	-	83659970	83659970	8553170	9	1969,169,116,2978,235,159,263,116,50,	0,3904,5059,6379,17756,18470,19804,22980,26033,
#Partially deleted in new
chr9	83661428	83707934	chr9:83661428-83707934	1	-	83661786	83707679	0	10	511,169,116,143,235,159,263,116,152,435,	0,2446,3601,7756,16298,17012,18346,21522,24575,46071,
#Partially deleted in new
chr9	83661901	83669291	chr9:83661901-83669291	0	-	83661901	83669291	789624	5	38,169,116,45,107,	0,1973,3128,4448,7283,
#Partially deleted in new
chr9	83661910	83665393	chr9:83661910-83665393	0	-	83661910	83661910	8553170	3	29,169,364,	0,1964,3119,
#Partially deleted in new
chr9	83677751	83707601	chr9:83677751-83707601	0	-	83677751	83707601	789624	3	210,159,102,	0,689,29748,
#Partially deleted in new
chr9	83739420	83817742	chr9:83739420-83817742	3	-	83739696	83806517	789624	13	324,78,71,64,102,153,23,124,78,144,259,132,226,	0,2531,3109,8888,13837,29397,40961,45294,49180,59764,66881,77575,78096,
#Partially deleted in new
chr9	83739424	83817632	chr9:83739424-83817632	1	-	83739696	83806517	789624	12	320,78,71,64,102,23,124,78,144,259,132,116,	0,2527,3105,8884,13833,40957,45290,49176,59760,66877,77571,78092,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	83739503	83749155	chr9:83739503-83749155	0	-	83739503	83739503	8553170	4	241,78,71,847,	0,2448,3026,8805,
#Partially deleted in new
chr9	83768916	83829516	chr9:83768916-83829516	0	-	83792996	83806517	789624	11	54,23,124,78,67,144,259,132,228,75,47,	0,11465,15798,19684,24034,30268,37385,48079,48600,60144,60553,
#Partially deleted in new
chr9	83784793	83789105	chr9:83784793-83789105	0	-	83784793	83784793	8553170	2	45,505,	0,3807,
#Partially deleted in new
chr9	83806354	83817296	chr9:83806354-83817296	0	-	83806354	83806517	789624	3	206,132,65,	0,10641,10877,
#Deleted in new
chr9	83816995	83818121	chr9:83816995-83818121	0	-	83816995	83816995	8553170	2	132,137,	0,989,
#Partially deleted in new
chr9	83817642	83837583	chr9:83817642-83837583	3	+	83817642	83817642	8553170	8	85,173,129,109,50,155,114,176,	0,758,2668,11964,13920,17908,19387,19765,
#Partially deleted in new
chr9	83829655	83837587	chr9:83829655-83837587	1	+	83829655	83829655	8553170	5	60,72,50,114,180,	0,1212,1907,7374,7752,
#Partially deleted in new
chr9	83831562	83837861	chr9:83831562-83837861	0	+	83831562	83831562	8553170	3	50,114,190,	0,5467,6109,
#Partially deleted in new
chr9	83831564	83837585	chr9:83831564-83837585	0	+	83831564	83831564	8553170	4	48,155,114,178,	0,3986,5465,5843,
#Partially deleted in new
chr9	83831585	83867806	chr9:83831585-83867806	2	+	83831585	83831585	8553170	8	27,155,114,66,220,297,58,93,	0,3965,5444,7158,17786,27278,27692,36128,
#Partially deleted in new
chr9	83836697	83921427	chr9:83836697-83921427	3	-	83837000	83915591	789624	18	788,165,199,207,216,177,114,198,206,156,104,170,207,144,959,201,385,57,	0,5539,13401,16931,22458,30986,33821,43599,47115,50343,51791,52386,54597,62963,66362,71754,78596,84673,
#Partially deleted in new
chr9	83836697	83921465	chr9:83836697-83921465	1	-	83837000	83915591	789624	16	788,165,199,207,216,198,206,156,104,170,207,144,959,201,385,95,	0,5539,13401,16931,22458,43599,47115,50343,51791,52386,54597,62963,66362,71754,78596,84673,
#Partially deleted in new
chr9	83836697	83921465	chr9:83836697-83921465	1	-	83837000	83915591	789624	17	788,165,199,207,216,177,114,206,156,104,170,207,144,959,201,385,95,	0,5539,13401,16931,22458,30986,33821,47115,50343,51791,52386,54597,62963,66362,71754,78596,84673,
#Deleted in new
chr9	83837051	83837583	chr9:83837051-83837583	0	+	83837051	83837051	8553170	2	248,176,	0,356,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	83848807	83867800	chr9:83848807-83867800	0	+	83848807	83848807	8553170	5	148,220,297,58,87,	0,564,10056,10470,18906,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	83848809	83859154	chr9:83848809-83859154	1	+	83848809	83848809	8553170	3	146,184,291,	0,598,10054,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	83848885	83859325	chr9:83848885-83859325	1	+	83848885	83848885	8553170	5	70,220,122,297,48,	0,486,6170,9978,10392,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	83848909	83867808	chr9:83848909-83867808	0	+	83848909	83848909	8553170	4	46,220,472,95,	0,462,9954,18804,
#Partially deleted in new
chr9	83858300	83868239	chr9:83858300-83868239	1	+	83858300	83858300	8553170	3	860,48,526,	0,977,9413,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	83858840	83859880	chr9:83858840-83859880	0	+	83858840	83858840	8553170	3	320,48,304,	0,437,736,
#Partially deleted in new
chr9	83858977	83868532	chr9:83858977-83868532	0	+	83858977	83858977	8553170	3	183,58,819,	0,300,8736,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	83858977	83860098	chr9:83858977-83860098	0	+	83858977	83858977	8553170	3	183,58,522,	0,300,599,
#Partially deleted in new
chr9	83880117	83889270	chr9:83880117-83889270	1	-	83880251	83889235	789624	5	377,206,156,104,187,	0,3695,6923,8371,8966,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	83898695	83915678	chr9:83898695-83915678	0	-	83899787	83915591	789624	4	253,144,201,385,	0,965,9756,16598,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	83938310	83956717	chr9:83938310-83956717	3	-	83939510	83956500	789624	4	1433,196,260,554,	0,6483,17070,17853,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	83938313	83956986	chr9:83938313-83956986	1	-	83939510	83955554	789624	5	1430,196,260,91,90,	0,6480,17067,17850,18583,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	83953647	83956327	chr9:83953647-83956327	1	-	83953834	83955554	789624	3	196,260,164,	0,1733,2516,
#Partially deleted in new
chr9	83968082	83980604	chr9:83968082-83980604	3	-	83969406	83978252	0	17	1358,170,83,16,84,55,308,129,114,72,73,44,57,98,85,80,102,	0,2079,2654,2814,3190,3589,3799,4761,5203,5819,6434,7379,8912,9606,10112,10290,12420,
#Partially deleted in new
chr9	83968083	83980269	chr9:83968083-83980269	1	-	83969406	83978252	0	17	1357,170,83,16,84,55,308,129,114,72,73,44,57,98,85,80,117,	0,2078,2653,2813,3189,3588,3798,4760,5202,5818,6433,7378,8911,9605,10111,10289,12069,
#Partially deleted in new
chr9	83968196	83978452	chr9:83968196-83978452	1	-	83969349	83978252	0	16	1184,170,83,16,84,55,308,129,114,72,73,44,57,98,85,80,	0,1965,2540,2700,3076,3475,3685,4647,5089,5705,6320,7265,8798,9492,9998,10176,
#Partially deleted in new
chr9	83968908	83980250	chr9:83968908-83980250	1	-	83969349	83978252	0	17	472,170,83,16,84,55,308,129,114,72,73,44,57,98,85,80,98,	0,1253,1828,1988,2364,2763,2973,3935,4377,4993,5608,6553,8086,8780,9286,9464,11244,
#Deleted in new
chr9	83969197	83970786	chr9:83969197-83970786	0	-	83969197	83969197	8553170	2	243,625,	0,964,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	83969415	83971146	chr9:83969415-83971146	0	-	83969415	83969415	8553170	4	25,170,83,250,	0,746,1321,1481,
#Partially deleted in new
chr9	83969495	83971294	chr9:83969495-83971294	0	-	83970151	83971294	789624	4	836,83,16,22,	0,1241,1401,1777,
#Deleted in new
chr9	83969747	83969857	chr9:83969747-83969857	3	-	83969747	83969747	5263520	1	110,	0,
#Partially deleted in new
chr9	83970312	83980190	chr9:83970312-83980190	0	-	83970312	83978252	789624	15	19,83,16,84,55,308,129,114,73,44,57,98,85,80,38,	0,424,584,960,1359,1569,2531,2973,4204,5149,6682,7376,7882,8060,9840,
#Deleted in new
chr9	83972232	83975777	chr9:83972232-83975777	3	+	83972232	83972232	8553170	2	45,345,	0,3200,
#Deleted in new
chr9	83972843	83980616	chr9:83972843-83980616	0	-	83974568	83978252	789624	9	129,114,72,73,57,98,85,80,114,	0,442,1058,1673,4151,4845,5351,5529,7659,
#Deleted in new
chr9	83973291	83975770	chr9:83973291-83975770	0	-	83973291	83973291	8553170	4	108,72,73,309,	0,610,1225,2170,
#Deleted in new
chr9	83976507	83980595	chr9:83976507-83980595	0	-	83976507	83976507	8553170	5	544,98,85,80,93,	0,1181,1687,1865,3995,
#Partially deleted in new
chr9	83980710	84002233	chr9:83980710-84002233	0	+	84000986	84002233	789624	3	181,89,1283,	0,18998,20240,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	83980797	84004074	chr9:83980797-84004074	3	+	84000986	84002864	0	3	207,89,3124,	0,18911,20153,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	83992931	83993033	chr9:83992931-83993033	3	+	83992931	83992931	8553170	1	102,	0,
#Deleted in new
chr9	84078583	84078857	chr9:84078583-84078857	7	+	84078583	84078583	16724991	1	274,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr9	84275456	84340683	chr9:84275456-84340683	3	-	84278217	84340633	789624	18	2888,121,99,82,198,169,131,126,81,81,78,114,145,190,92,86,96,110,	0,3808,4518,5344,9888,10486,12591,14697,17211,18738,21764,22449,24124,26743,29797,34172,37902,65117,
#Partially deleted in new
chr9	84278218	84290131	chr9:84278218-84290131	3	+	84278218	84278218	8553170	2	181,192,	0,11721,
#Partially deleted in new
chr9	84305275	84340659	chr9:84305275-84340659	0	-	84305275	84305275	8553170	5	70,86,176,96,86,	0,4353,5136,8083,35298,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	84316513	84657077	chr9:84316513-84657077	3	+	84316513	84316513	8553170	7	536,278,164,87,113,163,1864,	0,180955,204548,266683,295123,295321,338700,
#Deleted in new
chr9	84604110	84604425	chr9:84604110-84604425	7	-	84604110	84604110	16724991	1	315,	0,
#Partially deleted in new
chr9	84668550	85023590	chr9:84668550-85023590	1	+	84670748	85021437	0	20	235,122,209,584,75,72,69,155,137,133,306,36,101,100,189,131,173,235,159,2339,	0,751,1129,1826,33608,33797,39293,42086,55022,55673,59103,73341,76422,83435,198692,265611,279911,286732,351655,352701,
#Partially deleted in new
chr9	84668550	85023590	chr9:84668550-85023590	1	+	84670748	85021437	0	21	235,122,209,584,75,72,69,155,137,133,306,36,101,100,48,189,131,173,235,159,2339,	0,751,1129,1826,33608,33797,39293,42086,55022,55673,59103,73341,76422,83435,192489,198692,265611,279911,286732,351655,352701,
#Partially deleted in new
chr9	84669710	84815706	chr9:84669710-84815706	1	+	84670748	84810579	0	13	178,584,75,72,69,155,137,133,306,36,101,100,5165,	0,666,32448,32637,38133,40926,53862,54513,57943,72181,75262,82275,140831,
#Partially deleted in new
chr9	84669777	85027070	chr9:84669777-85027070	3	+	84670748	85021437	0	19	111,584,75,72,69,155,137,133,306,36,101,100,48,189,131,173,235,159,5819,	0,599,32381,32570,38066,40859,53795,54446,57876,72114,75195,82208,191262,197465,264384,278684,285505,350428,351474,
#Partially deleted in new
chr9	84669777	84877898	chr9:84669777-84877898	1	+	84670748	84871817	0	15	111,584,75,72,69,155,137,133,306,36,101,100,48,189,6110,	0,599,32381,32570,38066,40859,53795,54446,57876,72114,75195,82208,191262,197465,202011,
#Partially deleted in new
chr9	84669777	84877898	chr9:84669777-84877898	1	+	84670748	84871817	0	14	111,584,75,72,69,155,137,133,306,36,101,100,189,6110,	0,599,32381,32570,38066,40859,53795,54446,57876,72114,75195,82208,197465,202011,
#Partially deleted in new
chr9	84670395	85022323	chr9:84670395-85022323	1	+	84670748	85021437	0	17	565,75,72,69,155,137,133,306,36,101,100,189,131,173,235,159,1072,	0,31763,31952,37448,40241,53177,53828,57258,71496,74577,81590,196847,263766,278066,284887,349810,350856,
#Partially deleted in new
chr9	84670659	84815702	chr9:84670659-84815702	1	+	84670748	84810579	0	12	301,75,72,69,155,137,133,306,36,101,100,5161,	0,31499,31688,37184,39977,52913,53564,56994,71232,74313,81326,139882,
#Deleted in new
chr9	85159681	85159950	chr9:85159681-85159950	7	+	85159681	85159681	16724991	1	269,	0,
#Partially deleted in new
chr9	85167345	85194283	chr9:85167345-85194283	3	+	85167345	85167345	8553170	7	33,71,208,183,166,94,195,	0,5613,8130,15312,15640,24626,26743,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	85370218	85443963	chr9:85370218-85443963	3	-	85370218	85370218	8553170	4	2742,279,141,180,	0,31466,32328,73565,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	85492578	85494094	chr9:85492578-85494094	7	+	85492578	85492578	16724991	2	113,1105,	0,411,
#Partially deleted in new
chr9	85546538	85741818	chr9:85546538-85741818	3	-	85547108	85712533	789624	26	748,161,177,132,130,181,154,145,88,149,87,84,713,117,98,58,209,38,94,132,147,64,68,125,65,44,	0,28776,32381,38924,40292,41759,42989,46021,49823,72444,72676,74663,86123,96288,99782,108604,110896,114397,122946,126011,130897,131796,134729,146150,165963,195236,
#Partially deleted in new
chr9	85546539	85742029	chr9:85546539-85742029	1	-	85547108	85741962	789624	25	747,161,177,132,130,181,154,145,88,149,87,84,713,117,98,178,209,38,94,132,147,64,68,125,255,	0,28775,32380,38923,40291,41758,42988,46020,49822,72443,72675,74662,86122,96287,99781,108603,110895,114396,122945,126010,130896,131795,134728,146149,195235,
#Partially deleted in new
chr9	85546541	85741886	chr9:85546541-85741886	1	-	85547108	85712533	789624	26	745,161,177,132,130,181,154,145,88,149,87,84,713,117,98,178,209,38,94,132,147,64,68,125,65,112,	0,28773,32378,38921,40289,41756,42986,46018,49820,72441,72673,74660,86120,96285,99779,108601,110893,114394,122943,126008,130894,131793,134726,146147,165960,195233,
#Partially deleted in new
chr9	85546670	85742029	chr9:85546670-85742029	1	-	85547108	85741962	789624	25	616,161,177,132,130,181,154,145,88,149,87,84,713,117,98,58,209,38,94,132,147,64,68,125,255,	0,28644,32249,38792,40160,41627,42857,45889,49691,72312,72544,74531,85991,96156,99650,108472,110764,114265,122814,125879,130765,131664,134597,146018,195104,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	85553872	85579025	chr9:85553872-85579025	0	-	85553872	85553872	8553170	3	400,161,106,	0,21442,25047,
#Partially deleted in new
chr9	85655215	85741888	chr9:85655215-85741888	0	-	85655215	85655215	8553170	9	105,94,132,147,64,68,125,65,114,	0,14269,17334,22220,23119,26052,37473,57286,86559,
#Partially deleted in new
chr9	85657437	85692792	chr9:85657437-85692792	0	-	85657437	85657437	8553170	7	206,38,94,132,147,68,104,	0,3498,12047,15112,19998,23830,35251,
#Partially deleted in new
chr9	85657453	85692780	chr9:85657453-85692780	0	-	85657453	85657453	8553170	7	190,94,132,147,64,68,92,	0,12031,15096,19982,20881,23814,35235,
#Partially deleted in new
chr9	85753305	85786575	chr9:85753305-85786575	7	+	85753305	85753305	16724991	7	114,177,218,207,199,160,472,	0,2768,11402,16978,20532,27896,32798,
#Partially deleted in new
chr9	85756041	85765112	chr9:85756041-85765112	3	-	85756041	85756041	8553170	3	179,58,192,	0,8702,8879,
#Partially deleted in new
chr9	85785721	85791539	chr9:85785721-85791539	0	-	85785721	85785721	8553170	3	193,114,53,	0,716,5765,
#Partially deleted in new
chr9	85785998	85793480	chr9:85785998-85793480	1	-	85785998	85785998	8553170	5	177,114,50,72,60,	0,439,5488,6182,7422,
#Partially deleted in new
chr9	85786000	85791534	chr9:85786000-85791534	3	-	85786000	85786000	8553170	4	175,114,155,48,	0,437,1883,5486,
#Deleted in new
chr9	85786002	85786529	chr9:85786002-85786529	1	-	85786002	85786002	8553170	2	173,246,	0,281,
#Partially deleted in new
chr9	85805358	85849542	chr9:85805358-85849542	7	+	85805358	85805358	16724991	10	240,132,201,144,207,186,100,156,206,197,	0,643,17521,24104,32400,34718,35391,37365,40483,43987,
#Partially deleted in new
chr9	85815965	85849542	chr9:85815965-85849542	5	+	85815965	85815965	16724991	9	298,201,144,207,186,100,156,206,197,	0,6914,13497,21793,24111,24784,26758,29876,33380,
#Deleted in new
chr9	85898902	85899716	chr9:85898902-85899716	7	+	85898902	85898902	16724991	1	814,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	85934587	85936599	chr9:85934587-85936599	7	+	85934587	85934587	16724991	3	517,634,317,	0,771,1695,
#Partially deleted in new
chr9	85941145	86022298	chr9:85941145-86022298	3	+	85942159	86021960	789624	23	128,129,34,115,75,168,67,44,51,84,115,179,60,107,67,99,179,137,68,141,123,81,398,	0,1009,15214,17326,18647,20867,33821,33968,35539,36217,37121,55253,62439,66212,68719,71900,72573,75393,76352,77109,77553,79743,80755,
#Partially deleted in new
chr9	85941181	85966672	chr9:85941181-85966672	0	+	85941181	85941181	8553170	7	92,129,34,115,75,168,77,	0,973,15178,17290,18611,20831,25414,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	85941528	85987041	chr9:85941528-85987041	1	+	85942159	85986480	789624	12	346,129,34,115,75,168,67,44,51,84,115,569,	0,626,14831,16943,18264,20484,33438,33585,35156,35834,36738,44944,
#Partially deleted in new
chr9	86026145	86099558	chr9:86026145-86099558	1	-	86027816	86079320	789624	10	1748,114,258,160,130,103,55,180,150,148,	0,7136,9222,10202,14593,20324,26391,51266,53046,73265,
#Partially deleted in new
chr9	86026146	86100149	chr9:86026146-86100149	3	-	86027816	86079320	789624	10	1747,114,258,160,130,103,55,180,150,125,	0,7135,9221,10201,14592,20323,26390,51265,53045,73878,
#Deleted in new
chr9	86035394	86036813	chr9:86035394-86036813	0	-	86035394	86035394	8553170	2	231,466,	0,953,
#Partially deleted in new
chr9	86035587	86078012	chr9:86035587-86078012	0	-	86035587	86035587	8553170	7	38,160,130,103,55,180,128,	0,760,5151,10882,16949,41824,42297,
#Partially deleted in new
chr9	86040740	86079341	chr9:86040740-86079341	0	-	86046563	86079320	789624	4	128,103,180,150,	0,5729,36671,38451,
#Partially deleted in new
chr9	86046469	86100173	chr9:86046469-86100173	0	-	86046469	86046469	8553170	5	103,55,128,41,149,	0,6067,30942,32831,53555,
#Partially deleted in new
chr9	86052536	86080165	chr9:86052536-86080165	0	-	86052536	86079320	789624	4	55,180,150,484,	0,24875,26655,27145,
#Deleted in new
chr9	86132621	86132851	chr9:86132621-86132851	7	+	86132621	86132621	16724991	1	230,	0,
#Partially deleted in new
chr9	86220264	86259657	chr9:86220264-86259657	3	-	86221687	86229603	789624	4	1469,176,92,108,	0,7590,9273,39285,
#Partially deleted in new
chr9	86220264	86229630	chr9:86220264-86229630	1	-	86221687	86229603	789624	3	1469,176,93,	0,7590,9273,
#Partially deleted in new
chr9	86221469	86229629	chr9:86221469-86229629	0	-	86221469	86221469	8553170	2	264,92,	0,8068,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	86221473	86258218	chr9:86221473-86258218	1	-	86221494	86229603	8553170	5	260,487,92,44,641,	0,6070,8064,8281,36104,
#Partially deleted in new
chr9	86227310	86259604	chr9:86227310-86259604	1	-	86227332	86229603	789624	4	86,176,92,55,	0,544,2227,32239,
#Deleted in new
chr9	86227332	86229630	chr9:86227332-86229630	1	-	86227332	86229603	789624	3	64,176,93,	0,522,2205,
#Deleted in new
chr9	86228814	86228983	chr9:86228814-86228983	7	+	86228814	86228814	16724991	1	169,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	86258357	86258646	chr9:86258357-86258646	3	-	86258357	86258357	8553170	1	289,	0,
#Partially deleted in new
chr9	86264545	86282529	chr9:86264545-86282529	3	-	86266042	86282458	789624	4	1646,106,54,152,	0,7461,9643,17832,
#Partially deleted in new
chr9	86265678	86282108	chr9:86265678-86282108	1	-	86266042	86266138	789624	4	513,106,54,140,	0,6328,8510,16290,
#Partially deleted in new
chr9	86266093	86283102	chr9:86266093-86283102	0	-	86266093	86282919	789624	4	98,106,54,201,	0,5913,8095,16808,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	86266862	86282538	chr9:86266862-86282538	1	-	86267785	86282458	789624	4	943,106,54,161,	0,5144,7326,15515,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr9	86287732	86354410	chr9:86287732-86354410	1	-	86288676	86323616	789624	28	1012,326,116,92,48,178,78,114,90,104,58,101,87,151,1088,181,121,153,120,127,70,52,89,178,117,182,551,140,	0,13543,15353,17123,17459,20696,21479,21730,22195,22973,29486,31225,31851,34592,35140,37601,38638,40607,49686,51090,52303,53269,55342,57244,57936,58566,64947,66538,
#Partially deleted in new
chr9	86287732	86354454	chr9:86287732-86354454	1	-	86288676	86353199	0	20	1012,326,116,92,48,178,78,114,90,104,58,1088,181,153,89,178,117,182,551,184,	0,13543,15353,17123,17459,20696,21479,21730,22195,22973,29486,35140,37601,40607,55342,57244,57936,58566,64947,66538,
#Partially deleted in new
chr9	86287734	86319644	chr9:86287734-86319644	1	-	86288676	86318987	789624	12	1010,326,116,92,48,178,78,90,104,58,101,61,	0,13541,15351,17121,17457,20694,21477,22193,22971,29484,31223,31849,
#Partially deleted in new
chr9	86287958	86354412	chr9:86287958-86354412	3	-	86288676	86353199	0	27	786,326,116,92,48,178,78,114,90,104,58,101,87,151,1088,181,153,120,127,70,52,89,178,117,182,551,142,	0,13317,15127,16897,17233,20470,21253,21504,21969,22747,29260,30999,31625,34366,34914,37375,40381,49460,50864,52077,53043,55116,57018,57710,58340,64721,66312,
#Deleted in new
chr9	86323627	86324653	chr9:86323627-86324653	0	-	86323627	86323627	8553170	2	333,292,	0,734,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	86336878	86343123	chr9:86336878-86343123	1	-	86337412	86341053	789624	5	660,127,70,52,49,	0,1944,3157,4123,6196,
#Partially deleted in new
chr9	86344869	86352706	chr9:86344869-86352706	1	-	86344965	86352698	789624	4	285,117,182,27,	0,799,1429,7810,
#Deleted in new
chr9	86374965	86375706	chr9:86374965-86375706	7	-	86374965	86374965	16724991	1	741,	0,
#Deleted in new
chr9	86414281	86414570	chr9:86414281-86414570	3	+	86414281	86414281	8553170	2	64,133,	0,156,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	86422937	86423128	chr9:86422937-86423128	3	-	86422937	86422937	8553170	1	191,	0,
#Partially deleted in new
chr9	86632146	86696496	chr9:86632146-86696496	3	+	86632146	86632146	8553170	3	122,44,364,	0,27866,63986,
#Partially deleted in new
chr9	86669348	86708307	chr9:86669348-86708307	3	-	86669348	86669348	8553170	3	1082,271,93,	0,35839,38866,
#Deleted in new
chr9	86944362	86947189	chr9:86944362-86947189	3	-	86945741	86946779	789624	1	2827,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	86948698	87002033	chr9:86948698-87002033	3	+	86948698	86948698	789624	7	295,133,156,168,105,90,3440,	0,2168,33071,38749,40103,48615,49895,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	87008454	87042126	chr9:87008454-87042126	3	-	87008454	87008454	789624	2	1756,256,	0,33416,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	87009032	87012032	chr9:87009032-87012032	0	-	87009032	87009032	8553170	2	1178,254,	0,2746,
#Deleted in new
chr9	87011651	87013151	chr9:87011651-87013151	7	+	87011651	87011651	16724991	1	1500,	0,
#Deleted in new
chr9	87084160	87085151	chr9:87084160-87085151	7	-	87084160	87084160	16724991	1	991,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	87148643	87159556	chr9:87148643-87159556	3	+	87148643	87148643	8553170	2	255,2984,	0,7929,
#Deleted in new
chr9	87260449	87260585	chr9:87260449-87260585	3	+	87260449	87260449	8553170	1	136,	0,
#Deleted in new
chr9	87423633	87423893	chr9:87423633-87423893	7	+	87423633	87423633	16724991	1	260,	0,
#Partially deleted in new
chr9	87497227	87708631	chr9:87497227-87708631	3	+	87499077	87707364	0	26	75,170,222,139,130,49,27,153,46,90,93,120,99,99,99,198,198,99,78,223,189,198,139,121,189,2500,	0,1742,107726,140715,142126,142422,142561,143070,143574,144741,146148,148667,149233,150077,151553,152693,154299,160801,171369,184176,189323,199779,201428,202889,205801,208904,
#Partially deleted in new
chr9	87497680	87708633	chr9:87497680-87708633	1	+	87499077	87707364	0	25	427,170,222,139,130,49,27,153,46,90,93,120,99,99,99,198,198,99,78,223,189,139,121,189,2502,	0,1289,107273,140262,141673,141969,142108,142617,143121,144288,145695,148214,148780,149624,151100,152240,153846,160348,170916,183723,188870,200975,202436,205348,208451,
#Partially deleted in new
chr9	87497680	87708630	chr9:87497680-87708630	1	+	87499077	87707364	0	26	92,170,222,139,130,49,27,153,46,90,93,120,99,99,99,198,198,99,78,223,189,198,139,121,189,2499,	0,1289,107273,140262,141673,141969,142108,142617,143121,144288,145695,148214,148780,149624,151100,152240,153846,160348,170916,183723,188870,199326,200975,202436,205348,208451,
#Partially deleted in new
chr9	87497735	87650511	chr9:87497735-87650511	0	+	87497735	87497735	8553170	16	372,170,222,139,130,49,27,153,46,90,93,120,99,99,99,591,	0,1234,107218,140207,141618,141914,142053,142562,143066,144233,145640,148159,148725,149569,151045,152185,
#Partially deleted in new
chr9	87497834	87507002	chr9:87497834-87507002	0	+	87497834	87497834	8553170	3	273,170,183,	0,1135,8985,
#Partially deleted in new
chr9	87497880	87708628	chr9:87497880-87708628	1	+	87499077	87707364	0	26	227,170,222,139,130,49,27,153,46,90,93,120,99,99,99,198,198,99,78,223,189,198,139,121,189,2497,	0,1089,107073,140062,141473,141769,141908,142417,142921,144088,145495,148014,148580,149424,150900,152040,153646,160148,170716,183523,188670,199126,200775,202236,205148,208251,
#Deleted in new
chr9	87497911	87499352	chr9:87497911-87499352	0	+	87497911	87497911	8553170	2	196,383,	0,1058,
#Partially deleted in new
chr9	87498534	87638027	chr9:87498534-87638027	0	+	87498534	87498534	8553170	4	102,170,222,85,	0,435,106419,139408,
#Partially deleted in new
chr9	87498534	87708633	chr9:87498534-87708633	1	+	87499077	87707364	0	26	102,170,222,139,130,49,27,153,46,90,93,120,99,99,99,198,198,99,78,223,189,198,139,121,189,2502,	0,435,106419,139408,140819,141115,141254,141763,142267,143434,144841,147360,147926,148770,150246,151386,152992,159494,170062,182869,188016,198472,200121,201582,204494,207597,
#Partially deleted in new
chr9	87498610	87639483	chr9:87498610-87639483	0	+	87498610	87498610	8553170	4	26,170,222,130,	0,359,106343,140743,
#Partially deleted in new
chr9	87499004	87707382	chr9:87499004-87707382	1	+	87499077	87707364	0	24	135,222,139,130,49,27,153,46,90,93,120,99,99,99,198,198,99,78,223,189,139,121,189,1251,	0,105949,138938,140349,140645,140784,141293,141797,142964,144371,146890,147456,148300,149776,150916,152522,159024,169592,182399,187546,199651,201112,204024,207127,
#Partially deleted in new
chr9	87499005	87707382	chr9:87499005-87707382	0	+	87499077	87639802	789624	24	134,222,139,130,27,153,46,90,93,120,99,99,99,198,198,99,78,223,189,198,139,121,189,1251,	0,105948,138937,140348,140783,141292,141796,142963,144370,146889,147455,148299,149775,150915,152521,159023,169591,182398,187545,198001,199650,201111,204023,207126,
#Deleted in new
chr9	87525301	87525475	chr9:87525301-87525475	7	+	87525301	87525301	16724991	1	174,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	87553453	87554459	chr9:87553453-87554459	3	+	87553453	87553453	789624	2	137,565,	0,441,
#Deleted in new
chr9	87639437	87640412	chr9:87639437-87640412	0	+	87639437	87639437	8553170	3	46,166,115,	0,212,860,
#Partially deleted in new
chr9	87648574	87651590	chr9:87648574-87651590	0	+	87648574	87648574	8553170	3	305,198,64,	0,1346,2952,
#Deleted in new
chr9	87648585	87650479	chr9:87648585-87650479	0	+	87648585	87648585	8553170	2	294,559,	0,1335,
#Partially deleted in new
chr9	87649989	87668047	chr9:87649989-87668047	0	+	87649989	87649989	8553170	4	129,198,99,270,	0,1537,8039,17788,
#Partially deleted in new
chr9	87657415	87668948	chr9:87657415-87668948	0	+	87657415	87657415	8553170	2	712,352,	0,11181,
#Partially deleted in new
chr9	87668452	87681522	chr9:87668452-87681522	0	+	87668452	87668452	8553170	2	222,119,	0,12951,
#Deleted in new
chr9	87698408	87700217	chr9:87698408-87700217	0	+	87698408	87698408	8553170	2	386,101,	0,1708,
#Partially deleted in new
chr9	87725518	87731392	chr9:87725518-87731392	3	+	87727603	87731107	0	8	880,136,123,147,225,163,118,385,	0,2075,2508,2731,3066,4054,4862,5489,
#Partially deleted in new
chr9	87726108	87731386	chr9:87726108-87731386	1	+	87727603	87731107	0	8	145,136,123,147,225,163,118,379,	0,1485,1918,2141,2476,3464,4272,4899,
#Partially deleted in new
chr9	87726113	87731073	chr9:87726113-87731073	0	+	87726113	87726113	8553170	7	140,116,147,225,163,118,66,	0,1920,2136,2471,3459,4267,4894,
#Partially deleted in new
chr9	87726133	87731393	chr9:87726133-87731393	0	+	87726133	87726133	8553170	6	120,109,92,163,118,386,	0,1460,2584,3439,4247,4874,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	87726139	87728997	chr9:87726139-87728997	1	+	87727603	87728866	789624	5	114,136,123,147,413,	0,1454,1887,2110,2445,
#Partially deleted in new
chr9	87726139	87729680	chr9:87726139-87729680	0	+	87726139	87726139	8553170	6	169,136,123,147,225,108,	0,1454,1887,2110,2445,3433,
#Deleted in new
chr9	87741232	87741953	chr9:87741232-87741953	7	+	87741232	87741232	16724991	1	721,	0,
#Deleted in new
chr9	87772452	87774299	chr9:87772452-87774299	5	+	87772452	87772452	16724991	5	114,126,147,241,160,	0,426,646,969,1687,
#Partially deleted in new
chr9	87799500	87821803	chr9:87799500-87821803	7	-	87799500	87799500	16724991	4	195,149,183,218,	0,21162,21428,22085,
#Partially deleted in new
chr9	87810641	87837225	chr9:87810641-87837225	7	-	87810641	87810641	16724991	4	105,144,138,143,	0,15844,22113,26441,
#Deleted in new
chr9	87816464	87817970	chr9:87816464-87817970	7	+	87816464	87816464	16724991	1	1506,	0,
#Deleted in new
chr9	87825145	87825968	chr9:87825145-87825968	7	+	87825145	87825145	16724991	1	823,	0,
#Partially deleted in new
chr9	87832773	87837198	chr9:87832773-87837198	4	-	87832773	87832773	16724991	2	119,116,	0,4309,
#Deleted in new
chr9	87844153	87847314	chr9:87844153-87847314	7	+	87844153	87844153	16724991	7	115,120,147,221,162,116,93,	0,426,646,1009,1708,2454,3068,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	87848112	87853442	chr9:87848112-87853442	3	-	87848112	87848112	8553170	4	586,106,138,151,	0,1463,4778,5179,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	87857014	87859399	chr9:87857014-87859399	7	-	87857014	87857014	16724991	2	1157,857,	0,1528,
#Deleted in new
chr9	87858102	87859599	chr9:87858102-87859599	5	-	87858102	87858102	16724991	1	1497,	0,
#Deleted in new
chr9	87864095	87866291	chr9:87864095-87866291	7	+	87864095	87864095	16724991	2	254,390,	0,1806,
#Deleted in new
chr9	87864165	87866290	chr9:87864165-87866290	4	+	87864165	87864165	16724991	2	63,389,	0,1736,
#Deleted in new
chr9	87865319	87866001	chr9:87865319-87866001	5	+	87865319	87865319	16724991	2	112,100,	0,582,
#Deleted in new
chr9	87882825	87888899	chr9:87882825-87888899	3	+	87882891	87888825	789624	4	375,55,61,3987,	0,1166,1765,2087,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	87914492	87921108	chr9:87914492-87921108	5	+	87914492	87914492	16724991	6	218,164,95,532,61,857,	0,3049,3747,4324,5423,5759,
#Partially deleted in new
chr9	87914521	87923505	chr9:87914521-87923505	7	+	87914521	87914521	16724991	5	189,333,58,61,3254,	0,3325,4769,5394,5730,
#Deleted in new
chr9	87944275	87945023	chr9:87944275-87945023	7	-	87944275	87944275	16724991	1	748,	0,
#Deleted in new
chr9	87956213	87956883	chr9:87956213-87956883	3	+	87956266	87956500	789624	1	670,	0,
#Partially deleted in new
chr9	87966440	87974685	chr9:87966440-87974685	0	-	87966440	87966440	8553170	5	1219,1704,189,114,314,	0,2753,4706,7481,7931,
#Partially deleted in new
chr9	87966445	87974589	chr9:87966445-87974589	3	-	87967461	87974446	789624	7	1214,156,124,122,189,153,218,	0,2748,3350,4330,4701,7476,7926,
#Partially deleted in new
chr9	87966445	87974753	chr9:87966445-87974753	1	-	87967461	87974446	789624	7	1214,156,124,122,189,114,382,	0,2748,3350,4330,4701,7476,7926,
#Partially deleted in new
chr9	87966445	87974534	chr9:87966445-87974534	0	-	87966445	87966445	8553170	2	4890,613,	0,7476,
#Partially deleted in new
chr9	87966449	87974487	chr9:87966449-87974487	1	-	87967583	87974446	789624	6	1210,156,122,189,114,116,	0,2744,4326,4697,7472,7922,
#Partially deleted in new
chr9	87966610	87974505	chr9:87966610-87974505	1	-	87967583	87974446	789624	7	1021,156,124,122,189,114,134,	0,2583,3185,4165,4536,7311,7761,
#Partially deleted in new
chr9	87966633	87974752	chr9:87966633-87974752	1	-	87967461	87974446	789624	8	1026,156,124,63,122,189,114,381,	0,2560,3162,3934,4142,4513,7288,7738,
#Partially deleted in new
chr9	87966881	87974701	chr9:87966881-87974701	0	-	87966881	87966881	8553170	7	778,156,124,330,189,114,330,	0,2312,2914,3686,4265,7040,7490,
#Partially deleted in new
chr9	87970439	87974531	chr9:87970439-87974531	0	-	87970439	87970439	8553170	3	896,114,160,	0,3482,3932,
#Partially deleted in new
chr9	87971036	87974531	chr9:87971036-87974531	0	-	87971036	87971036	8553170	3	299,114,160,	0,2885,3335,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	87998228	87998335	chr9:87998228-87998335	3	-	87998228	87998228	8553170	1	107,	0,
#Partially deleted in new
chr9	88016299	88016793	chr9:88016299-88016793	7	+	88016299	88016299	16724991	1	494,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	88066914	88068037	chr9:88066914-88068037	7	+	88066914	88066914	16724991	3	244,94,79,	0,564,1044,
#Partially deleted in new
chr9	88129457	88138446	chr9:88129457-88138446	7	-	88129457	88129457	16724991	5	3253,61,58,216,189,	0,3508,4136,5310,8800,
#Deleted in new
chr9	88144850	88145850	chr9:88144850-88145850	7	-	88144850	88144850	16724991	1	1000,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	88177694	88178578	chr9:88177694-88178578	3	+	88177694	88177694	8553170	1	884,	0,
#Partially deleted in new
chr9	88180672	88181447	chr9:88180672-88181447	7	+	88180672	88180672	16724991	1	775,	0,
#Partially deleted in new
chr9	88187734	88190202	chr9:88187734-88190202	7	-	88187734	88187734	16724991	3	930,1065,95,	0,1246,2373,
#Partially deleted in new
chr9	88324453	88325339	chr9:88324453-88325339	7	+	88324453	88324453	16724991	1	886,	0,
#Partially deleted in new
chr9	88388418	88478694	chr9:88388418-88478694	3	+	88426539	88475277	0	6	120,210,49,254,234,3617,	0,37963,60522,74077,79953,86659,
#Partially deleted in new
chr9	88388429	88475245	chr9:88388429-88475245	0	+	88388429	88388429	8553170	5	109,49,254,234,168,	0,60511,74066,79942,86648,
#Partially deleted in new
chr9	88388443	88462638	chr9:88388443-88462638	0	+	88388443	88388443	8553170	5	95,102,210,49,143,	0,30406,37938,60497,74052,
#Partially deleted in new
chr9	88388451	88475203	chr9:88388451-88475203	0	+	88388451	88388451	8553170	5	87,210,49,234,126,	0,37930,60489,79920,86626,
#Partially deleted in new
chr9	88389370	88468477	chr9:88389370-88468477	0	+	88389370	88389370	8553170	5	40,210,49,254,106,	0,37011,59570,73125,79001,
#Deleted in new
chr9	88391361	88391832	chr9:88391361-88391832	7	-	88391361	88391361	16724991	1	471,	0,
#Deleted in new
chr9	88410528	88411463	chr9:88410528-88411463	7	-	88410528	88410528	16724991	1	935,	0,
#Deleted in new
chr9	88484851	88485325	chr9:88484851-88485325	7	-	88484851	88484851	16724991	1	474,	0,
#Partially deleted in new
chr9	88534032	88544978	chr9:88534032-88544978	0	+	88534032	88534032	8553170	3	56,338,600,	0,1366,10346,
#Partially deleted in new
chr9	88535100	88544547	chr9:88535100-88544547	3	+	88535434	88544547	789624	2	636,169,	0,9278,
#Partially deleted in new
chr9	88535104	88544980	chr9:88535104-88544980	0	+	88535104	88535104	8553170	2	632,602,	0,9274,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	88535185	88584274	chr9:88535185-88584274	0	+	88535185	88535185	8553170	2	551,276,	0,48813,
#Partially deleted in new
chr9	88647178	88652160	chr9:88647178-88652160	0	-	88647178	88647178	8553170	2	482,200,	0,4782,
#Deleted in new
chr9	88745835	88745905	chr9:88745835-88745905	3	-	88745835	88745835	5263520	1	70,	0,
#Deleted in new
chr9	88970886	88971341	chr9:88970886-88971341	7	-	88970886	88970886	16724991	1	455,	0,
#Partially deleted in new
chr9	88971637	88976298	chr9:88971637-88976298	3	+	88971637	88971637	8553170	2	208,183,	0,4478,
#Deleted in new
chr9	88990862	88996140	chr9:88990862-88996140	1	+	88990995	88991988	789624	3	379,226,4289,	0,607,989,
#Deleted in new
chr9	88990862	88996140	chr9:88990862-88996140	0	+	88990862	88990862	8553170	3	322,226,4289,	0,607,989,
#Deleted in new
chr9	88990920	88992064	chr9:88990920-88992064	0	+	88990920	88990920	8553170	2	264,595,	0,549,
#Deleted in new
chr9	88990927	88996140	chr9:88990927-88996140	0	+	88990927	88990927	8553170	3	314,226,4289,	0,542,924,
#Deleted in new
chr9	88990995	88991988	chr9:88990995-88991988	1	+	88990995	88991988	789624	3	189,226,137,	0,474,856,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	88991446	89005010	chr9:88991446-89005010	3	+	89001200	89002337	789624	2	249,3957,	0,9607,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	88996505	89005010	chr9:88996505-89005010	1	+	89001200	89002337	789624	1	8505,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	89005770	89178767	chr9:89005770-89178767	3	-	89013446	89178460	789624	12	7805,296,159,88,151,127,52,54,120,64,71,781,	0,32222,36255,39975,41073,46266,59758,65428,69338,72069,106785,172216,
#Deleted in new
chr9	89037365	89042137	chr9:89037365-89042137	1	-	89037508	89042029	789624	3	161,296,112,	0,627,4660,
#Partially deleted in new
chr9	89088603	89109298	chr9:89088603-89109298	1	-	89088603	89088603	8553170	2	332,251,	0,20444,
#Partially deleted in new
chr9	89088886	89109934	chr9:89088886-89109934	3	-	89088886	89088886	8553170	3	49,81,455,	0,20161,20593,
#Deleted in new
chr9	89311197	89316703	chr9:89311197-89316703	3	+	89311292	89316425	0	3	154,128,331,	0,3972,5175,
#Deleted in new
chr9	89312224	89312306	chr9:89312224-89312306	3	+	89312224	89312224	5263520	1	82,	0,
#Partially deleted in new
chr9	89318505	89359650	chr9:89318505-89359650	3	+	89318576	89358824	789624	17	107,146,250,142,227,79,209,123,90,133,167,136,154,221,155,193,930,	0,1146,6921,7391,10154,14402,16016,19952,21358,22841,28376,29573,31270,32126,38905,39493,40215,
#Partially deleted in new
chr9	89318518	89359642	chr9:89318518-89359642	1	+	89319713	89358824	789624	17	94,146,129,142,227,79,209,123,90,133,167,136,154,221,155,193,922,	0,1133,7029,7378,10141,14389,16003,19939,21345,22828,28363,29560,31257,32113,38892,39480,40202,
#Partially deleted in new
chr9	89318850	89359662	chr9:89318850-89359662	1	+	89325448	89358824	789624	17	217,146,250,142,227,79,209,123,90,133,167,136,154,221,155,193,942,	0,801,6576,7046,9809,14057,15671,19607,21013,22496,28031,29228,30925,31781,38560,39148,39870,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	89322199	89330445	chr9:89322199-89330445	0	+	89322199	89322199	8553170	3	3477,142,1786,	0,3697,6460,
#Partially deleted in new
chr9	89325959	89341479	chr9:89325959-89341479	0	+	89325959	89341479	789624	7	79,227,79,95,123,90,133,	0,2700,6948,8676,12498,13904,15387,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	89332587	89338510	chr9:89332587-89338510	0	+	89332953	89338510	789624	3	399,95,53,	0,2048,5870,
#Partially deleted in new
chr9	89332916	89339947	chr9:89332916-89339947	0	+	89332916	89332916	8553170	5	70,131,209,123,84,	0,1108,1605,5541,6947,
#Partially deleted in new
chr9	89348147	89358129	chr9:89348147-89358129	0	+	89348147	89348147	8553170	5	67,154,221,281,131,	0,1628,2484,9137,9851,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	89356525	89358153	chr9:89356525-89358153	0	+	89356525	89356525	8553170	2	1040,155,	0,1473,
#Partially deleted in new
chr9	89360786	89498038	chr9:89360786-89498038	1	-	89362401	89405456	0	19	1642,98,210,219,44,173,116,223,157,176,152,114,94,99,63,146,349,63,120,	0,2643,2954,16046,20268,20387,25580,26599,27849,28085,30477,31636,32775,35950,38489,42084,44564,57269,137132,
#Partially deleted in new
chr9	89360790	89455953	chr9:89360790-89455953	1	-	89362401	89405456	0	20	1638,98,210,219,44,173,116,223,157,176,152,114,94,99,63,146,349,63,75,66,	0,2639,2950,16042,20264,20383,25576,26595,27845,28081,30473,31632,32771,35946,38485,42080,44560,57265,57572,95097,
#Partially deleted in new
chr9	89360790	89377282	chr9:89360790-89377282	0	-	89360790	89360790	8553170	4	1638,98,210,450,	0,2639,2950,16042,
#Deleted in new
chr9	89361600	89364651	chr9:89361600-89364651	1	-	89362401	89363987	789624	3	828,98,911,	0,1829,2140,
#Deleted in new
chr9	89361600	89369519	chr9:89361600-89369519	0	-	89361600	89361600	8553170	4	828,98,210,2397,	0,1829,2140,5522,
#Deleted in new
chr9	89361600	89365654	chr9:89361600-89365654	0	-	89361600	89361600	8553170	2	828,2225,	0,1829,
#Partially deleted in new
chr9	89361608	89498130	chr9:89361608-89498130	1	-	89362401	89405456	0	20	820,98,210,219,44,173,116,223,157,176,152,114,94,99,63,146,349,63,66,212,	0,1821,2132,15224,19446,19565,24758,25777,27027,27263,29655,30814,31953,35128,37667,41262,43742,56447,94279,136310,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr9	89361978	89479890	chr9:89361978-89479890	0	-	89363749	89405456	789624	17	450,98,210,116,223,157,176,152,114,94,99,63,146,349,63,66,319,	0,1451,1762,24388,25407,26657,26893,29285,30444,31583,34758,37297,40892,43372,56077,93909,117593,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr9	89362238	89479890	chr9:89362238-89479890	0	-	89363749	89405456	789624	18	190,98,210,116,223,157,176,152,114,94,99,63,146,349,63,75,66,319,	0,1191,1502,24128,25147,26397,26633,29025,30184,31323,34498,37037,40632,43112,55817,56124,93649,117333,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr9	89376385	89418833	chr9:89376385-89418833	1	-	89378703	89405456	0	16	3244,44,173,116,223,157,176,152,114,94,99,63,146,349,63,471,	0,4669,4788,9981,11000,12250,12486,14878,16037,17176,20351,22890,26485,28965,41670,41977,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr9	89377234	89479890	chr9:89377234-89479890	1	-	89378703	89405456	0	18	2395,44,173,116,223,157,176,152,114,94,99,63,146,349,63,75,66,319,	0,3820,3939,9132,10151,11401,11637,14029,15188,16327,19502,22041,25636,28116,40821,41128,78653,102337,
#Partially deleted in new
chr9	89377236	89455953	chr9:89377236-89455953	1	-	89378703	89405456	0	17	2393,44,173,116,223,157,176,152,114,94,99,63,146,349,63,75,66,	0,3818,3937,9130,10149,11399,11635,14027,15186,16325,19500,22039,25634,28114,40819,41126,78651,
#Partially deleted in new
chr9	89377390	89498089	chr9:89377390-89498089	3	-	89378703	89405456	0	16	2239,44,173,116,223,157,176,152,114,94,99,63,146,349,66,171,	0,3664,3783,8976,9995,11245,11481,13873,15032,16171,19346,21885,25480,27960,78497,120528,
#Partially deleted in new
chr9	89379374	89381843	chr9:89379374-89381843	0	-	89379374	89379374	8553170	3	255,44,670,	0,1680,1799,
#Partially deleted in new
chr9	89379586	89381187	chr9:89379586-89381187	0	-	89379586	89379586	8553170	2	43,133,	0,1468,
#Partially deleted in new
chr9	89381055	89386749	chr9:89381055-89386749	0	-	89381055	89381055	8553170	3	43,173,383,	0,118,5311,
#Deleted in new
chr9	89387171	89388726	chr9:89387171-89388726	0	-	89387171	89387171	8553170	2	437,91,	0,1464,
#Partially deleted in new
chr9	89393630	89436483	chr9:89393630-89436483	0	-	89393630	89405456	789624	7	25,99,63,146,349,63,162,	0,3106,5645,9240,11720,24425,42691,
#Partially deleted in new
chr9	89402895	89405926	chr9:89402895-89405926	0	-	89402895	89405456	789624	3	121,349,132,	0,2455,2899,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	89402924	89479890	chr9:89402924-89479890	0	-	89402924	89405456	789624	4	92,349,66,319,	0,2426,52963,76647,
#Partially deleted in new
chr9	89402944	89436463	chr9:89402944-89436463	0	-	89402944	89405456	789624	3	72,349,142,	0,2406,33377,
#Partially deleted in new
chr9	89405453	89497432	chr9:89405453-89497432	0	-	89405453	89405456	8553170	4	246,63,66,58,	0,12602,50434,91921,
#Partially deleted in new
chr9	89405560	89418233	chr9:89405560-89418233	0	-	89405560	89405560	8553170	2	139,178,	0,12495,
#Partially deleted in new
chr9	89405601	89436578	chr9:89405601-89436578	0	-	89405601	89405601	8553170	4	98,63,75,257,	0,12454,12761,30720,
#Deleted in new
chr9	89449557	89450754	chr9:89449557-89450754	7	+	89449557	89449557	16724991	1	1197,	0,
#Deleted in new
chr9	89472236	89472692	chr9:89472236-89472692	7	+	89472236	89472236	16724991	1	456,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	89563536	89604060	chr9:89563536-89604060	3	-	89563536	89563536	8553170	7	980,226,847,271,166,122,112,	0,1059,1560,4084,37032,39203,40412,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	89600682	89603139	chr9:89600682-89603139	0	-	89600682	89600682	8553170	2	52,400,	0,2057,
#Deleted in new
chr9	89605012	89606555	chr9:89605012-89606555	3	+	89605121	89606079	0	4	162,102,214,587,	0,419,654,956,
#Deleted in new
chr9	89605037	89606235	chr9:89605037-89606235	1	+	89605432	89606079	789624	3	496,214,267,	0,629,931,
#Deleted in new
chr9	89605091	89606098	chr9:89605091-89606098	0	+	89605091	89605091	8553170	3	442,123,130,	0,666,877,
#Partially deleted in new
chr9	89639813	89719759	chr9:89639813-89719759	3	+	89639813	89639813	5263520	6	166,455,731,167,71,573,	0,25114,32943,58219,62104,79373,
#Partially deleted in new
chr9	89701650	89719670	chr9:89701650-89719670	0	+	89701650	89701650	8553170	2	338,484,	0,17536,
#Partially deleted in new
chr9	89799694	89821753	chr9:89799694-89821753	3	+	89799694	89799694	8553170	3	254,159,503,	0,3359,21556,
#Deleted in new
chr9	89801726	89803061	chr9:89801726-89803061	3	-	89801726	89801726	8553170	2	840,88,	0,1247,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	89978281	89987486	chr9:89978281-89987486	3	+	89978281	89978281	8553170	2	151,306,	0,8899,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	90020653	90041499	chr9:90020653-90041499	3	-	90020653	90020653	789624	4	892,1537,84,207,	0,3909,15394,20639,
#Deleted in new
chr9	90023440	90023535	chr9:90023440-90023535	3	-	90023440	90023440	5263520	1	95,	0,
#Deleted in new
chr9	90081296	90082569	chr9:90081296-90082569	7	-	90081296	90081296	16724991	1	1273,	0,
#Deleted in new
chr9	90108243	90108518	chr9:90108243-90108518	7	+	90108243	90108243	16724991	1	275,	0,
#Deleted in new
chr9	90158027	90158646	chr9:90158027-90158646	3	+	90158027	90158027	8553170	1	619,	0,
#Partially deleted in new
chr9	90216038	90216924	chr9:90216038-90216924	7	+	90216038	90216038	16724991	1	886,	0,
#Partially deleted in new
chr9	90232184	90233141	chr9:90232184-90233141	7	+	90232184	90232184	16724991	1	957,	0,
#Partially deleted in new
chr9	90300901	90433489	chr9:90300901-90433489	3	-	90300901	90300901	789624	3	752,202,59,	0,82618,132529,
#Partially deleted in new
chr9	90383609	90433505	chr9:90383609-90433505	1	-	90383609	90383609	8553170	3	112,568,75,	0,1406,49821,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	90463523	90466945	chr9:90463523-90466945	1	-	90463523	90463523	8553170	2	279,130,	0,3292,
#Partially deleted in new
chr9	90463658	90582744	chr9:90463658-90582744	3	-	90463658	90463658	789624	6	144,146,58,83,143,217,	0,37980,42064,43599,45140,118869,
#Partially deleted in new
chr9	90561028	90582694	chr9:90561028-90582694	0	-	90561028	90561028	8553170	2	124,167,	0,21499,
#Partially deleted in new
chr9	90609831	90643105	chr9:90609831-90643105	3	-	90613227	90613827	0	2	4032,354,	0,32920,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	90613698	90642862	chr9:90613698-90642862	0	-	90613698	90613827	789624	3	165,300,111,	0,12177,29053,
#Deleted in new
chr9	90742525	90743380	chr9:90742525-90743380	7	-	90742525	90742525	16724991	1	855,	0,
#Deleted in new
chr9	90751239	90752230	chr9:90751239-90752230	7	-	90751239	90751239	16724991	1	991,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	90801786	90898549	chr9:90801786-90898549	1	+	90843898	90895600	0	13	107,458,161,139,79,50,88,178,210,190,141,113,3022,	0,42071,43647,60419,62802,63261,72417,72885,75784,76977,85962,86728,93741,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr9	90801786	90898549	chr9:90801786-90898549	3	+	90843898	90895600	0	14	107,458,161,139,79,50,69,88,178,210,190,141,113,3022,	0,42071,43647,60419,62802,63261,65344,72417,72885,75784,76977,85962,86728,93741,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	90801926	90898549	chr9:90801926-90898549	1	+	90843898	90895600	0	13	79,458,161,139,79,50,88,178,210,190,141,113,3022,	0,41931,43507,60279,62662,63121,72277,72745,75644,76837,85822,86588,93601,
#Partially deleted in new
chr9	90801961	90844246	chr9:90801961-90844246	0	+	90801961	90801961	8553170	2	78,389,	0,41896,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr9	90827487	90898549	chr9:90827487-90898549	1	+	90843898	90895600	0	14	92,458,161,139,79,50,69,88,178,210,190,141,113,3022,	0,16370,17946,34718,37101,37560,39643,46716,47184,50083,51276,60261,61027,68040,
#Partially deleted in new
chr9	91119061	91182762	chr9:91119061-91182762	1	+	91119061	91119061	789624	3	25,135,294,	0,166,63407,
#Partially deleted in new
chr9	91119137	91163087	chr9:91119137-91163087	3	-	91119137	91119137	8553170	2	423,83,	0,43867,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	91159572	91165658	chr9:91159572-91165658	3	+	91159572	91159572	8553170	2	235,2788,	0,3298,
#Deleted in new
chr9	91159600	91162705	chr9:91159600-91162705	1	+	91159600	91159600	8553170	2	207,384,	0,2721,
#Deleted in new
chr9	91160355	91162632	chr9:91160355-91162632	0	+	91160355	91160355	8553170	2	125,311,	0,1966,
#Deleted in new
chr9	91162497	91163331	chr9:91162497-91163331	0	+	91162497	91162497	8553170	1	834,	0,
#Partially deleted in new
chr9	91169584	91170045	chr9:91169584-91170045	7	-	91169584	91169584	16724991	1	461,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	91170668	91182717	chr9:91170668-91182717	2	+	91170668	91170668	8553170	2	53,249,	0,11800,
#Partially deleted in new
chr9	91170672	91182717	chr9:91170672-91182717	1	+	91170672	91170672	8553170	4	49,148,115,249,	0,10975,11593,11796,
#Partially deleted in new
chr9	91182056	91182717	chr9:91182056-91182717	0	+	91182056	91182056	8553170	2	329,205,	0,456,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	91206174	91210299	chr9:91206174-91210299	3	-	91206174	91206174	8553170	1	4125,	0,
#Partially deleted in new
chr9	91213814	91361913	chr9:91213814-91361913	1	-	91214347	91361889	0	9	611,48,51,188,57,93,88,68,286,	0,2244,3462,6990,82206,84169,142068,142273,147813,
#Partially deleted in new
chr9	91213814	91361913	chr9:91213814-91361913	3	-	91214347	91361889	0	10	611,48,51,188,57,93,87,88,68,286,	0,2244,3462,6990,82206,84169,111503,142068,142273,147813,
#Partially deleted in new
chr9	91213959	91220919	chr9:91213959-91220919	0	-	91213959	91213959	8553170	3	466,51,115,	0,3317,6845,
#Partially deleted in new
chr9	91297990	91361887	chr9:91297990-91361887	0	-	91297990	91297990	8553170	6	86,87,88,68,162,260,	0,27327,57892,58097,62288,63637,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	91342714	91356121	chr9:91342714-91356121	0	-	91342714	91342714	8553170	3	519,88,34,	0,13168,13373,
#Partially deleted in new
chr9	91409044	91423862	chr9:91409044-91423862	3	-	91409345	91410734	789624	2	1862,223,	0,14595,
#Deleted in new
chr9	91426237	91427144	chr9:91426237-91427144	3	+	91426237	91426237	8553170	2	159,315,	0,592,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	91563090	91948880	chr9:91563090-91948880	1	-	91694361	91757314	789624	13	239,92,90,55,954,203,246,315,128,31,288,78,274,	0,131229,154216,159435,161063,163450,167819,170031,174300,192980,194181,212650,385516,
#Deleted in new
chr9	91611342	91612492	chr9:91611342-91612492	7	+	91611342	91611342	16724991	1	1150,	0,
#Deleted in new
chr9	91636250	91636361	chr9:91636250-91636361	3	+	91636250	91636250	5263520	1	111,	0,
#Deleted in new
chr9	91636263	91636345	chr9:91636263-91636345	3	-	91636263	91636263	5263520	1	82,	0,
#Partially deleted in new
chr9	91722596	91950162	chr9:91722596-91950162	3	-	91723661	91949963	0	9	2511,203,246,315,128,31,288,78,296,	0,3944,8313,10525,14794,33474,34675,53144,227270,
#Partially deleted in new
chr9	91722601	91887199	chr9:91722601-91887199	0	-	91722601	91722601	8553170	11	2506,203,246,315,128,31,288,78,126,103,336,	0,3939,8308,10520,14789,33469,34670,53139,160656,164066,164262,
#Partially deleted in new
chr9	91755939	91775781	chr9:91755939-91775781	0	-	91755939	91755939	8553170	3	162,131,41,	0,1489,19801,
#Partially deleted in new
chr9	91757333	91948676	chr9:91757333-91948676	0	-	91757333	91757333	8553170	5	226,78,126,164,70,	0,18407,125924,166431,191273,
#Partially deleted in new
chr9	91757435	91948741	chr9:91757435-91948741	0	-	91757435	91757435	8553170	4	124,78,164,135,	0,18305,166329,191171,
#Partially deleted in new
chr9	91923652	91949906	chr9:91923652-91949906	0	-	91923652	91923652	8553170	2	276,40,	0,26214,
#Partially deleted in new
chr9	91923667	91948715	chr9:91923667-91948715	0	-	91923667	91923667	8553170	2	261,109,	0,24939,
#Partially deleted in new
chr9	92006061	92006544	chr9:92006061-92006544	7	+	92006061	92006061	16724991	1	483,	0,
#Deleted in new
chr9	92027497	92027824	chr9:92027497-92027824	7	+	92027497	92027497	16724991	1	327,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr9	92028457	92080076	chr9:92028457-92080076	0	-	92077027	92080076	789624	14	300,167,74,118,55,60,97,96,108,90,130,133,238,61,	0,722,6352,9790,17541,17817,18714,19155,21502,26947,30721,39508,48340,51558,
#Partially deleted in new
chr9	92031271	92115374	chr9:92031271-92115374	0	-	92070291	92115370	789624	16	1287,74,118,55,97,96,108,90,130,133,173,73,94,95,108,61,	0,3538,6976,14727,15900,16341,18688,24133,27907,36694,38852,48744,49598,77468,81183,84042,
#Partially deleted in new
chr9	92031998	92115376	chr9:92031998-92115376	3	-	92032464	92115370	789624	15	560,74,118,55,97,96,108,90,130,133,73,94,95,108,63,	0,2811,6249,14000,15173,15614,17961,23406,27180,35967,48017,48871,76741,80456,83315,
#Partially deleted in new
chr9	92032353	92038458	chr9:92032353-92038458	0	-	92032353	92032353	8553170	3	205,74,211,	0,2456,5894,
#Partially deleted in new
chr9	92059178	92115384	chr9:92059178-92115384	0	-	92059178	92059178	8553170	8	130,133,133,73,94,95,108,71,	0,8787,20255,20837,21691,49561,53276,56135,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	92079060	92115383	chr9:92079060-92115383	1	-	92079561	92115370	789624	6	506,73,94,95,108,70,	0,955,1809,29679,33394,36253,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	92079852	92108768	chr9:92079852-92108768	0	-	92079852	92079852	8553170	3	236,94,29,	0,1017,28887,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	92104424	92105451	chr9:92104424-92105451	7	+	92104424	92104424	16724991	1	1027,	0,
#Partially deleted in new
chr9	92107800	92115382	chr9:92107800-92115382	0	-	92107800	92107800	8553170	5	269,95,108,145,69,	0,939,4654,7121,7513,
#Partially deleted in new
chr9	92108159	92115338	chr9:92108159-92115338	0	-	92108159	92108159	8553170	3	675,108,25,	0,4295,7154,
#Deleted in new
chr9	92108857	92108989	chr9:92108857-92108989	7	+	92108857	92108857	16724991	1	132,	0,
#Partially deleted in new
chr9	92109012	92110095	chr9:92109012-92110095	7	+	92109012	92109012	16724991	2	677,102,	0,981,
#Deleted in new
chr9	92110167	92110514	chr9:92110167-92110514	7	+	92110167	92110167	16724991	1	347,	0,
#Deleted in new
chr9	92110574	92110868	chr9:92110574-92110868	7	+	92110574	92110574	16724991	1	294,	0,
#Deleted in new
chr9	92110864	92111897	chr9:92110864-92111897	7	+	92110864	92110864	16724991	1	1033,	0,
#Deleted in new
chr9	92132397	92138629	chr9:92132397-92138629	7	+	92132397	92132397	16724991	16	60,91,77,135,123,150,151,68,88,79,77,129,117,164,136,218,	0,222,421,1530,2345,3063,3345,3855,4052,4246,4414,4636,4905,5126,5637,6014,
#Partially deleted in new
chr9	92141297	92148306	chr9:92141297-92148306	7	+	92141297	92141297	16724991	2	353,385,	0,6624,
#Deleted in new
chr9	92141437	92141650	chr9:92141437-92141650	5	+	92141437	92141437	16724991	1	213,	0,
#Partially deleted in new
chr9	92141438	92148306	chr9:92141438-92148306	4	+	92141438	92141438	16724991	3	212,106,385,	0,560,6483,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	92141466	92160114	chr9:92141466-92160114	5	+	92141466	92141466	16724991	4	184,128,180,2014,	0,11270,14643,16634,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	92141595	92145110	chr9:92141595-92145110	4	+	92141595	92141595	16724991	4	55,53,90,226,	0,403,2882,3289,
#Partially deleted in new
chr9	92144940	92148306	chr9:92144940-92148306	4	+	92144940	92144940	16724991	2	91,385,	0,2981,
#Deleted in new
chr9	92147591	92148306	chr9:92147591-92148306	4	+	92147591	92147591	16724991	2	82,385,	0,330,
#Deleted in new
chr9	92147711	92148306	chr9:92147711-92148306	4	+	92147711	92147711	16724991	2	71,385,	0,210,
#Partially deleted in new
chr9	92150381	92157445	chr9:92150381-92157445	7	-	92150381	92150381	16724991	2	119,91,	0,6973,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	92152593	92158488	chr9:92152593-92158488	4	+	92152593	92152593	16724991	6	36,128,180,187,110,155,	0,143,3516,5093,5507,5740,
#Deleted in new
chr9	92171240	92173494	chr9:92171240-92173494	7	+	92171240	92171240	16724991	1	2254,	0,
#Partially deleted in new
chr9	92177234	92188652	chr9:92177234-92188652	7	-	92177234	92177234	16724991	3	240,130,135,	0,9507,11283,
#Partially deleted in new
chr9	92210206	92293700	chr9:92210206-92293700	3	-	92210806	92289419	789624	34	683,153,144,126,106,177,96,113,175,84,103,122,78,92,121,145,84,87,195,74,127,99,92,123,96,61,88,148,118,83,120,157,126,260,	0,12313,13139,18794,30649,31947,33009,34752,37170,39651,39980,40506,41601,43155,46473,48647,49944,52762,54722,55273,57967,59678,60778,61326,64219,67656,67992,70539,75515,76329,77584,77919,79094,83234,
#Partially deleted in new
chr9	92210210	92293756	chr9:92210210-92293756	1	-	92229092	92245021	789624	35	679,153,144,126,49,106,177,96,113,175,84,103,122,78,92,121,145,84,87,195,74,127,99,92,123,96,61,88,148,118,83,120,157,126,146,	0,12309,13135,18790,30432,30645,31943,33005,34748,37166,39647,39976,40502,41597,43151,46469,48643,49940,52758,54718,55269,57963,59674,60774,61322,64215,67652,67988,70535,75511,76325,77580,77915,79090,83400,
#Partially deleted in new
chr9	92210344	92293694	chr9:92210344-92293694	1	-	92210865	92289419	789624	35	527,17,153,144,126,106,177,96,113,175,84,103,122,78,92,121,145,84,87,195,74,127,99,92,123,96,61,88,148,118,83,120,157,126,84,	0,528,12175,13001,18656,30511,31809,32871,34614,37032,39513,39842,40368,41463,43017,46335,48509,49806,52624,54584,55135,57829,59540,60640,61188,64081,67518,67854,70401,75377,76191,77446,77781,78956,83266,
#Partially deleted in new
chr9	92210344	92293695	chr9:92210344-92293695	1	-	92210806	92287856	789624	33	545,153,144,126,106,177,96,113,175,84,103,122,78,92,121,145,84,87,195,74,127,99,92,123,96,61,88,148,118,83,120,126,85,	0,12175,13001,18656,30511,31809,32871,34614,37032,39513,39842,40368,41463,43017,46335,48509,49806,52624,54584,55135,57829,59540,60640,61188,64081,67518,67854,70401,75377,76191,77446,78956,83266,
#Partially deleted in new
chr9	92229000	92245101	chr9:92229000-92245101	1	-	92229092	92245021	789624	6	126,49,106,177,96,143,	0,11642,11855,13153,14215,15958,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	92240288	92243228	chr9:92240288-92243228	0	-	92240288	92240288	8553170	2	673,1075,	0,1865,
#Partially deleted in new
chr9	92240762	92243449	chr9:92240762-92243449	0	-	92240762	92240762	8553170	3	199,177,234,	0,1391,2453,
#Deleted in new
chr9	92250189	92250910	chr9:92250189-92250910	0	-	92250189	92250189	8553170	2	100,198,	0,523,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	92256356	92260212	chr9:92256356-92260212	0	-	92256356	92256356	8553170	3	444,145,62,	0,2497,3794,
#Partially deleted in new
chr9	92274425	92293716	chr9:92274425-92293716	0	-	92274425	92289419	789624	10	96,61,88,148,118,83,120,157,126,106,	0,3437,3773,6320,11296,12110,13365,13700,14875,19185,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	92277862	92286131	chr9:92277862-92286131	0	-	92277862	92277862	8553170	4	61,88,148,410,	0,336,2883,7859,
#Partially deleted in new
chr9	92287412	92293716	chr9:92287412-92293716	0	-	92287412	92287412	8553170	4	498,157,126,106,	0,713,1888,6198,
#Partially deleted in new
chr9	92287823	92293641	chr9:92287823-92293641	0	-	92287823	92293445	789624	3	87,126,201,	0,1477,5617,
#Deleted in new
chr9	92292457	92292547	chr9:92292457-92292547	3	-	92292457	92292457	5263520	1	90,	0,
#Deleted in new
chr9	92292460	92292593	chr9:92292460-92292593	3	-	92292460	92292460	789624	1	133,	0,
#Partially deleted in new
chr9	92297357	92325556	chr9:92297357-92325556	3	-	92297835	92324161	789624	17	529,80,71,127,272,78,139,91,123,114,1872,69,136,79,63,187,251,	0,899,1526,2532,4193,8395,9528,12813,13195,13788,16909,21260,21863,24310,26083,26665,27948,
#Partially deleted in new
chr9	92297358	92325594	chr9:92297358-92325594	1	-	92297835	92321744	789624	18	528,80,71,127,272,78,139,91,123,114,1872,69,136,79,116,63,187,277,	0,898,1525,2531,4192,8394,9527,12812,13194,13787,16908,21259,21862,24309,25877,26082,26664,27959,
#Partially deleted in new
chr9	92297423	92325590	chr9:92297423-92325590	0	-	92311147	92324161	789624	15	463,80,71,127,272,78,139,91,123,114,79,63,187,139,64,	0,833,1460,2466,4127,8329,9462,12747,13129,13722,24244,26017,26599,27894,28103,
#Partially deleted in new
chr9	92297483	92300026	chr9:92297483-92300026	0	-	92297483	92297483	8553170	3	403,698,137,	0,773,2406,
#Partially deleted in new
chr9	92297483	92325350	chr9:92297483-92325350	0	-	92323292	92324161	789624	18	403,80,71,127,272,78,139,91,123,114,1872,69,136,79,116,63,187,33,	0,773,1400,2406,4067,8269,9402,12687,13069,13662,16783,21134,21737,24184,25752,25957,26539,27834,
#Partially deleted in new
chr9	92297489	92325350	chr9:92297489-92325350	1	-	92297835	92324161	789624	17	397,80,71,127,272,78,139,91,123,114,1872,69,136,79,63,187,445,	0,767,1394,2400,4061,8263,9396,12681,13063,13656,16777,21128,21731,24178,25951,26533,27416,
#Partially deleted in new
chr9	92297613	92324660	chr9:92297613-92324660	0	-	92323292	92324161	789624	17	273,80,71,127,272,78,139,91,123,114,1872,69,136,79,116,63,638,	0,643,1270,2276,3937,8139,9272,12557,12939,13532,16653,21004,21607,24054,25622,25827,26409,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr9	92297616	92325338	chr9:92297616-92325338	0	-	92300727	92324161	789624	17	270,80,71,921,272,78,139,91,123,114,1872,69,136,79,63,187,33,	0,640,1267,2273,3934,8136,9269,12554,12936,13529,16650,21001,21604,24051,25824,26406,27689,
#Partially deleted in new
chr9	92297835	92324161	chr9:92297835-92324161	1	-	92297835	92324161	789624	15	51,80,71,127,272,78,139,91,123,1872,69,136,79,63,139,	0,421,1048,2054,3715,7917,9050,12335,12717,16431,20782,21385,23832,25605,26187,
#Partially deleted in new
chr9	92297835	92325333	chr9:92297835-92325333	1	-	92297835	92321744	789624	16	51,80,71,127,272,78,139,91,123,114,1872,69,136,79,63,28,	0,421,1048,2054,3715,7917,9050,12335,12717,13310,16431,20782,21385,23832,25605,27470,
#Partially deleted in new
chr9	92301578	92308950	chr9:92301578-92308950	0	-	92301578	92301578	8553170	4	244,78,139,46,	0,4174,5307,7326,
#Partially deleted in new
chr9	92301816	92325358	chr9:92301816-92325358	0	-	92301816	92324161	789624	13	6,78,139,91,123,114,1872,69,136,79,63,187,179,	0,3936,5069,8354,8736,9329,12450,16801,17404,19851,21624,22206,23363,
#Partially deleted in new
chr9	92306949	92325343	chr9:92306949-92325343	0	-	92323292	92324161	789624	13	75,91,123,114,1872,69,136,437,79,116,63,187,38,	0,3221,3603,4196,7317,11668,12271,12993,14718,16286,16491,17073,18356,
#Partially deleted in new
chr9	92306970	92310825	chr9:92306970-92310825	0	-	92306970	92306970	8553170	3	54,91,273,	0,3200,3582,
#Partially deleted in new
chr9	92315383	92325370	chr9:92315383-92325370	0	-	92315383	92324161	789624	7	755,69,136,79,63,229,65,	0,3234,3837,6284,8057,8639,9922,
#Partially deleted in new
chr9	92315688	92318947	chr9:92315688-92318947	0	-	92315688	92315688	8553170	2	450,330,	0,2929,
#Partially deleted in new
chr9	92315851	92325594	chr9:92315851-92325594	0	-	92315851	92324161	789624	7	287,69,136,79,63,187,277,	0,2766,3369,5816,7589,8171,9466,
#Partially deleted in new
chr9	92315956	92325312	chr9:92315956-92325312	0	-	92320112	92324161	789624	8	182,69,136,195,79,63,187,133,	0,2661,3264,3986,5711,7484,8066,9223,
#Partially deleted in new
chr9	92315981	92325385	chr9:92315981-92325385	0	-	92315981	92321744	789624	6	157,69,136,79,63,68,	0,2636,3239,5686,7459,9336,
#Partially deleted in new
chr9	92316093	92324675	chr9:92316093-92324675	0	-	92316093	92321744	789624	7	45,69,136,79,116,63,67,	0,2524,3127,5574,7142,7347,8515,
#Partially deleted in new
chr9	92318668	92325636	chr9:92318668-92325636	0	-	92318668	92324161	789624	6	18,136,79,63,187,68,	0,552,2999,4772,5354,6900,
#Partially deleted in new
chr9	92319277	92325331	chr9:92319277-92325331	0	-	92319277	92321744	789624	6	79,79,116,63,58,26,	0,2390,3958,4163,4745,6028,
#Partially deleted in new
chr9	92319287	92325348	chr9:92319287-92325348	0	-	92323292	92324161	789624	6	69,79,116,63,187,43,	0,2380,3948,4153,4735,6018,
#Partially deleted in new
chr9	92319319	92325336	chr9:92319319-92325336	0	-	92323292	92324161	789624	6	37,79,116,63,187,157,	0,2348,3916,4121,4703,5860,
#Partially deleted in new
chr9	92319987	92325350	chr9:92319987-92325350	0	-	92319987	92319987	8553170	5	395,79,63,187,45,	0,1680,3453,4035,5318,
#Partially deleted in new
chr9	92320129	92325361	chr9:92320129-92325361	0	-	92323292	92324161	789624	6	253,79,116,63,187,56,	0,1538,3106,3311,3893,5176,
#Partially deleted in new
chr9	92320190	92325353	chr9:92320190-92325353	0	-	92320190	92320190	8553170	5	189,79,63,187,48,	0,1477,3250,3832,5115,
#Deleted in new
chr9	92322849	92325292	chr9:92322849-92325292	0	-	92322849	92322849	8553170	4	502,63,187,113,	0,591,1173,2330,
#Deleted in new
chr9	92323136	92325350	chr9:92323136-92325350	0	-	92323136	92323136	8553170	3	367,187,45,	0,886,2169,
#Partially deleted in new
chr9	92325483	92620533	chr9:92325483-92620533	3	+	92325998	92613149	789624	8	622,182,89,89,97,80,92,7515,	0,6686,12057,20215,54279,285830,287039,287535,
#Partially deleted in new
chr9	92325998	92379865	chr9:92325998-92379865	1	+	92325998	92379865	789624	5	107,182,89,89,103,	0,6171,11542,19700,53764,
#Partially deleted in new
chr9	92339657	92341663	chr9:92339657-92341663	7	-	92339657	92339657	16724991	2	853,60,	0,1946,
#Partially deleted in new
chr9	92383966	92404559	chr9:92383966-92404559	1	-	92385619	92403407	789624	7	1824,96,203,159,94,531,64,	0,2234,5887,9119,17125,19267,20529,
#Partially deleted in new
chr9	92383966	92404613	chr9:92383966-92404613	3	-	92385619	92403407	789624	7	1824,96,203,159,94,249,118,	0,2234,5887,9119,17125,19267,20529,
#Partially deleted in new
chr9	92389640	92393152	chr9:92389640-92393152	0	-	92389640	92389640	8553170	2	416,67,	0,3445,
#Partially deleted in new
chr9	92389853	92404696	chr9:92389853-92404696	0	-	92389853	92404675	789624	5	203,159,94,168,201,	0,3232,11238,13380,14642,
#Partially deleted in new
chr9	92414244	92424461	chr9:92414244-92424461	3	-	92415151	92417558	0	3	1233,956,260,	0,2374,9957,
#Partially deleted in new
chr9	92456204	92482506	chr9:92456204-92482506	1	-	92457465	92474897	789624	6	1281,111,214,113,304,214,	0,8714,10153,14464,18419,26088,
#Partially deleted in new
chr9	92456204	92482506	chr9:92456204-92482506	3	-	92457287	92474897	789624	8	1281,139,94,111,214,113,304,214,	0,3427,4269,8714,10153,14464,18419,26088,
#Partially deleted in new
chr9	92493553	92536092	chr9:92493553-92536092	1	-	92494082	92522866	789624	10	596,327,140,158,136,116,507,189,319,160,	0,7173,8959,11979,16345,18457,21077,24133,29021,42379,
#Partially deleted in new
chr9	92495311	92536055	chr9:92495311-92536055	3	-	92496314	92522866	789624	10	1172,327,140,158,136,116,573,189,319,123,	0,5415,7201,10221,14587,16699,19319,22375,27263,40621,
#Partially deleted in new
chr9	92516711	92536055	chr9:92516711-92536055	1	-	92517672	92522866	789624	3	1164,319,123,	0,5863,19221,
#Partially deleted in new
chr9	92517687	92536655	chr9:92517687-92536655	0	-	92517687	92522866	789624	4	188,319,50,55,	0,4887,18245,18913,
#Deleted in new
chr9	92527983	92528058	chr9:92527983-92528058	3	-	92527983	92527983	5263520	1	75,	0,
#Deleted in new
chr9	92539052	92539184	chr9:92539052-92539184	7	-	92539052	92539052	16724991	1	132,	0,
#Partially deleted in new
chr9	92600093	92612368	chr9:92600093-92612368	3	-	92600093	92600093	8553170	3	2711,90,398,	0,11244,11877,
#Partially deleted in new
chr9	92600256	92615164	chr9:92600256-92615164	1	+	92600463	92613149	789624	4	252,80,92,2146,	0,11057,12266,12762,
#Deleted in new
chr9	92610543	92615164	chr9:92610543-92615164	1	+	92611307	92613149	789624	3	850,92,2146,	0,1979,2475,
#Partially deleted in new
chr9	92613183	92670265	chr9:92613183-92670265	3	-	92615831	92669988	789624	13	2874,80,103,151,280,73,59,90,122,67,96,48,358,	0,6302,21202,21974,24817,27526,29568,34875,36269,39389,43272,45450,56724,
#Deleted in new
chr9	92614555	92620330	chr9:92614555-92620330	0	-	92614555	92614555	8553170	2	1502,845,	0,4930,
#Partially deleted in new
chr9	92615526	92638079	chr9:92615526-92638079	1	-	92615831	92635240	789624	5	531,80,103,89,79,	0,3959,18859,19631,22474,
#Deleted in new
chr9	92676942	92677407	chr9:92676942-92677407	7	-	92676942	92676942	16724991	1	465,	0,
#Partially deleted in new
chr9	92711362	92764812	chr9:92711362-92764812	1	-	92715153	92764744	789624	7	4101,152,1044,456,153,213,308,	0,6434,7176,8937,11293,17661,53142,
#Partially deleted in new
chr9	92711362	92764812	chr9:92711362-92764812	3	-	92713455	92764744	789624	8	2099,211,152,1044,456,153,213,308,	0,3890,6434,7176,8937,11293,17661,53142,
#Partially deleted in new
chr9	92809387	92888693	chr9:92809387-92888693	7	+	92809387	92809387	16724991	11	483,115,174,107,138,68,54,964,95,61,111,	0,4208,4486,8930,9854,12822,17137,27389,74518,75178,79195,
#Partially deleted in new
chr9	92809567	92822277	chr9:92809567-92822277	4	+	92809567	92809567	16724991	6	303,115,174,107,138,68,	0,4028,4306,8750,9674,12642,
#Partially deleted in new
chr9	92809635	92826638	chr9:92809635-92826638	4	+	92809635	92809635	16724991	7	235,115,174,107,138,68,114,	0,3960,4238,8682,9606,12574,16889,
#Partially deleted in new
chr9	92809664	92826578	chr9:92809664-92826578	5	+	92809664	92809664	16724991	7	206,115,174,107,138,68,54,	0,3931,4209,8653,9577,12545,16860,
#Partially deleted in new
chr9	92813906	92838457	chr9:92813906-92838457	4	+	92813906	92813906	16724991	8	141,107,138,68,54,226,964,201,	0,4411,5335,8303,12618,15031,22870,24350,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	92820976	92821079	chr9:92820976-92821079	3	+	92820976	92820976	8553170	1	103,	0,
#Partially deleted in new
chr9	92822221	92829763	chr9:92822221-92829763	4	+	92822221	92822221	16724991	4	56,54,226,90,	0,4303,6716,7452,
#Deleted in new
chr9	92836825	92837668	chr9:92836825-92837668	7	-	92836825	92836825	16724991	1	843,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	92840954	92841688	chr9:92840954-92841688	7	-	92840954	92840954	16724991	1	734,	0,
#Partially deleted in new
chr9	92845030	92878038	chr9:92845030-92878038	1	-	92846227	92877840	0	4	3521,93,127,219,	0,10780,11161,32789,
#Partially deleted in new
chr9	92845030	92878038	chr9:92845030-92878038	1	-	92846227	92856225	0	6	3521,93,127,26,45,219,	0,10780,11161,17109,29984,32789,
#Partially deleted in new
chr9	92846068	92878022	chr9:92846068-92878022	1	-	92846227	92856225	0	4	2483,93,127,133,	0,9742,10123,31821,
#Partially deleted in new
chr9	92846068	92878008	chr9:92846068-92878008	3	-	92846227	92875029	0	5	2483,93,127,45,119,	0,9742,10123,28946,31821,
#Partially deleted in new
chr9	92882566	92885051	chr9:92882566-92885051	5	+	92882566	92882566	16724991	4	223,95,61,170,	0,1339,1999,2315,
#Partially deleted in new
chr9	92882582	92898605	chr9:92882582-92898605	4	+	92882582	92882582	16724991	4	207,95,61,224,	0,1323,1983,15799,
#Partially deleted in new
chr9	92882600	92888418	chr9:92882600-92888418	5	+	92882600	92882600	16724991	4	189,59,55,3541,	0,1341,1965,2277,
#Partially deleted in new
chr9	92883910	92899608	chr9:92883910-92899608	7	+	92883910	92883910	16724991	3	90,61,310,	0,655,15388,
#Deleted in new
chr9	92884184	92886158	chr9:92884184-92886158	4	+	92884184	92884184	16724991	2	442,1277,	0,697,
#Deleted in new
chr9	92893697	92894505	chr9:92893697-92894505	7	-	92893697	92893697	16724991	1	808,	0,
#Partially deleted in new
chr9	92913155	92921560	chr9:92913155-92921560	7	+	92913155	92913155	16724991	13	315,50,128,101,161,144,189,86,168,114,101,161,179,	0,620,1102,1394,1696,2882,4419,6528,6712,7032,7732,7956,8226,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr9	92947450	93036236	chr9:92947450-93036236	3	+	92976256	93035589	0	18	279,168,502,90,137,157,139,59,147,93,80,31,108,63,123,105,141,899,	0,27787,28757,55474,56550,58573,62795,63763,66401,68286,70685,72380,72866,74876,82423,85318,87090,87887,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr9	92963960	93036236	chr9:92963960-93036236	1	+	92976256	93035589	0	18	393,168,502,90,137,157,139,59,147,93,80,31,108,63,123,105,138,899,	0,11277,12247,38964,40040,42063,46285,47253,49891,51776,54175,55870,56356,58366,65913,68808,70583,71377,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr9	92964324	93036222	chr9:92964324-93036222	1	+	92976256	93035589	789624	18	29,168,502,90,137,157,139,59,147,93,80,31,108,63,123,105,141,885,	0,10913,11883,38600,39676,41699,45921,46889,49527,51412,53811,55506,55992,58002,65549,68444,70216,71013,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr9	92974481	93036232	chr9:92974481-93036232	1	+	92976256	93035589	0	18	265,168,502,90,137,157,139,59,147,93,80,31,108,63,123,105,141,895,	0,756,1726,28443,29519,31542,35764,36732,39370,41255,43654,45349,45835,47845,55392,58287,60059,60856,
#Deleted in new
chr9	92974499	92976707	chr9:92974499-92976707	0	+	92974499	92974499	8553170	3	247,168,500,	0,738,1708,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr9	92975249	93036236	chr9:92975249-93036236	0	+	92976256	93032993	0	16	156,502,90,137,157,139,59,147,93,80,31,108,63,123,1913,899,	0,958,27675,28751,30774,34996,35964,38602,40487,42886,44581,45067,47077,54624,57519,60088,
#Partially deleted in new
chr9	93015650	93018200	chr9:93015650-93018200	0	+	93015650	93015650	8553170	2	179,65,	0,2485,
#Deleted in new
chr9	93029873	93034619	chr9:93029873-93034619	0	+	93029873	93029873	8553170	4	123,158,105,76,	0,2525,2895,4670,
#Partially deleted in new
chr9	93058687	93085132	chr9:93058687-93085132	3	+	93058742	93084747	789624	4	143,189,148,596,	0,17096,19158,25849,
#Partially deleted in new
chr9	93058706	93085138	chr9:93058706-93085138	1	+	93058742	93084747	789624	5	124,189,148,132,602,	0,17077,19139,20764,25830,
#Partially deleted in new
chr9	93058778	93084667	chr9:93058778-93084667	0	+	93058778	93084667	789624	4	52,148,132,131,	0,19067,20692,25758,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	93069099	93085132	chr9:93069099-93085132	1	+	93069099	93084747	789624	5	49,189,148,132,596,	0,6684,8746,10371,15437,
#Partially deleted in new
chr9	93077845	93085133	chr9:93077845-93085133	0	+	93077845	93084747	789624	2	148,597,	0,6691,
#Partially deleted in new
chr9	93094938	93095529	chr9:93094938-93095529	3	-	93094938	93094938	8553170	2	76,162,	0,429,
#Partially deleted in new
chr9	93096217	93113282	chr9:93096217-93113282	3	+	93096345	93113107	0	6	135,143,154,60,72,291,	0,11456,14350,15661,16000,16774,
#Partially deleted in new
chr9	93096217	93113282	chr9:93096217-93113282	0	+	93096345	93111104	0	4	135,143,1722,291,	0,11456,14350,16774,
#Partially deleted in new
chr9	93096227	93111214	chr9:93096227-93111214	0	+	93096227	93096227	8553170	3	125,154,647,	0,11446,14340,
#Partially deleted in new
chr9	93096256	93110721	chr9:93096256-93110721	0	+	93096256	93096256	8553170	4	96,154,102,154,	0,11417,12734,14311,
#Partially deleted in new
chr9	93096277	93113207	chr9:93096277-93113207	0	+	93096277	93096277	789624	5	75,143,154,72,216,	0,11396,14290,15940,16714,
#Partially deleted in new
chr9	93096314	93113272	chr9:93096314-93113272	0	+	93096314	93096314	8553170	6	38,154,154,60,72,281,	0,11359,14253,15564,15903,16677,
#Partially deleted in new
chr9	93096322	93111187	chr9:93096322-93111187	0	+	93096322	93096322	8553170	3	30,143,620,	0,11351,14245,
#Partially deleted in new
chr9	93107747	93112289	chr9:93107747-93112289	0	+	93107747	93107747	8553170	3	80,154,72,	0,2820,4470,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	93109891	93113283	chr9:93109891-93113283	0	+	93109891	93109891	8553170	2	2398,292,	0,3100,
#Partially deleted in new
chr9	93121488	93134288	chr9:93121488-93134288	3	-	93124907	93134217	789624	4	742,164,229,146,	0,3410,4921,12654,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	93121496	93126190	chr9:93121496-93126190	0	-	93121496	93121496	8553170	2	734,1292,	0,3402,
#Partially deleted in new
chr9	93121832	93134238	chr9:93121832-93134238	0	-	93121832	93121832	8553170	4	398,164,176,96,	0,3066,4577,12310,
#Partially deleted in new
chr9	93121896	93134219	chr9:93121896-93134219	0	-	93121896	93121896	8553170	5	334,164,229,57,77,	0,3002,4513,9588,12246,
#Partially deleted in new
chr9	93126227	93134219	chr9:93126227-93134219	0	-	93126227	93126227	8553170	2	411,77,	0,7915,
#Partially deleted in new
chr9	93184915	93259075	chr9:93184915-93259075	0	+	93184929	93259075	789624	10	695,173,221,158,89,220,292,200,192,145,	0,44780,45972,49892,53317,54841,62627,67967,72032,74015,
#Partially deleted in new
chr9	93184929	93318271	chr9:93184929-93318271	3	+	93184929	93318027	0	30	681,173,221,158,89,220,292,200,156,192,684,294,50,169,117,171,46,120,111,833,70,89,683,215,192,99,45,257,112,399,	0,44766,45958,49878,53303,54827,62613,67953,71369,72018,74001,76884,77740,78636,78987,82816,83090,83697,83910,103858,105048,107378,107561,112923,114140,115121,121847,123398,132590,132943,
#Partially deleted in new
chr9	93184929	93320572	chr9:93184929-93320572	1	+	93184929	93320392	789624	29	681,173,221,158,89,220,292,200,156,192,684,294,50,169,117,171,46,120,833,70,89,683,215,192,99,45,257,112,206,	0,44766,45958,49878,53303,54827,62613,67953,71369,72018,74001,76884,77740,78636,78987,82816,83090,83697,103858,105048,107378,107561,112923,114140,115121,121847,123398,132590,135437,
#Partially deleted in new
chr9	93184929	93299156	chr9:93184929-93299156	1	+	93290016	93299156	789624	28	681,173,221,158,89,220,292,200,156,192,684,294,50,169,117,171,46,120,111,833,70,86,498,24,155,215,41,42,	0,44766,45958,49878,53303,54827,62613,67953,71369,72018,74001,76884,77740,78636,78987,82816,83090,83697,83910,103858,105048,107381,107561,108063,108089,112923,114140,114185,
#Partially deleted in new
chr9	93184942	93319204	chr9:93184942-93319204	0	+	93184942	93318074	789624	29	668,173,221,158,89,220,292,200,156,192,684,294,50,169,117,171,46,120,833,70,89,683,215,192,99,45,257,112,1177,	0,44753,45945,49865,53290,54814,62600,67940,71356,72005,73988,76871,77727,78623,78974,82803,83077,83684,103845,105035,107365,107548,112910,114127,115108,121834,123385,132577,133085,
#Partially deleted in new
chr9	93234922	93319208	chr9:93234922-93319208	0	+	93234922	93317849	789624	22	43,89,220,292,200,156,192,684,294,50,169,117,171,46,120,833,70,89,683,215,257,1689,	0,3310,4834,12620,17960,21376,22025,24008,26891,27747,28643,28994,32823,33097,33704,53865,55055,57385,57568,62930,73405,82597,
#Deleted in new
chr9	93256725	93259251	chr9:93256725-93259251	0	+	93256725	93256725	8553170	3	44,192,321,	0,222,2205,
#Partially deleted in new
chr9	93263265	93268040	chr9:93263265-93268040	0	+	93263265	93263265	8553170	5	59,169,117,171,21,	0,300,651,4480,4754,
#Partially deleted in new
chr9	93263947	93320572	chr9:93263947-93320572	0	+	93263947	93320392	789624	15	86,171,46,120,833,70,89,683,215,192,99,45,257,112,206,	0,3798,4072,4679,24840,26030,28360,28543,33905,35122,36103,42829,44380,53572,56419,
#Deleted in new
chr9	93267019	93267815	chr9:93267019-93267815	0	+	93267019	93267019	8553170	2	225,70,	0,726,
#Partially deleted in new
chr9	93289186	93308584	chr9:93289186-93308584	0	+	93289186	93308584	789624	7	434,70,86,683,215,192,257,	0,791,3124,3304,8666,9883,19141,
#Partially deleted in new
chr9	93293088	93308588	chr9:93293088-93308588	0	+	93293088	93293088	8553170	3	85,215,261,	0,4764,15239,
#Partially deleted in new
chr9	93293132	93300326	chr9:93293132-93300326	0	+	93293132	93293132	8553170	3	41,215,276,	0,4720,6918,
#Partially deleted in new
chr9	93306636	93320564	chr9:93306636-93320564	0	+	93306636	93306636	8553170	3	1948,112,198,	0,10883,13730,
#Deleted in new
chr9	93308500	93309195	chr9:93308500-93309195	0	+	93308500	93308500	8553170	2	84,475,	0,220,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	93315487	93320566	chr9:93315487-93320566	0	+	93315487	93315487	8553170	2	2144,200,	0,4879,
#Partially deleted in new
chr9	93318198	93346414	chr9:93318198-93346414	3	-	93318397	93335953	789624	5	351,74,287,101,341,	0,902,17175,17677,27875,
#Partially deleted in new
chr9	93318198	93346414	chr9:93318198-93346414	0	-	93318198	93318198	8553170	5	351,74,287,101,341,	0,902,17175,17677,27875,
#Partially deleted in new
chr9	93335373	93346152	chr9:93335373-93346152	4	-	93335373	93335373	16724991	3	287,101,79,	0,502,10700,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	93375555	93375667	chr9:93375555-93375667	3	+	93375555	93375555	8553170	1	112,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	93417854	93417966	chr9:93417854-93417966	3	+	93417854	93417854	8553170	1	112,	0,
#Partially deleted in new
chr9	93430341	93431299	chr9:93430341-93431299	3	-	93430341	93430341	8553170	2	452,189,	0,769,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	93434323	93451530	chr9:93434323-93451530	0	-	93434323	93434323	8553170	7	1599,192,98,114,440,121,586,	0,4303,5079,6936,12934,16155,16621,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	93435331	93437121	chr9:93435331-93437121	0	-	93435331	93435331	8553170	2	591,100,	0,1690,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	93443339	93453592	chr9:93443339-93453592	3	-	93447610	93452709	789624	3	4358,121,1446,	0,7139,8807,
#Partially deleted in new
chr9	93446493	93451562	chr9:93446493-93451562	1	-	93447610	93451104	789624	3	1204,121,475,	0,3985,4594,
#Partially deleted in new
chr9	93446493	93451524	chr9:93446493-93451524	0	-	93446493	93446493	789624	3	1204,121,580,	0,3985,4451,
#Partially deleted in new
chr9	93446524	93451524	chr9:93446524-93451524	0	-	93446524	93446524	8553170	3	1173,125,437,	0,3950,4563,
#Partially deleted in new
chr9	93446532	93451512	chr9:93446532-93451512	0	-	93446532	93446532	8553170	3	1165,113,568,	0,3942,4412,
#Partially deleted in new
chr9	93446904	93453257	chr9:93446904-93453257	0	-	93446904	93446904	789624	3	793,121,518,	0,3574,5835,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	93446904	93453257	chr9:93446904-93453257	0	-	93446904	93446904	789624	4	793,121,121,518,	0,1464,3574,5835,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	93446923	93451562	chr9:93446923-93451562	0	-	93448450	93451104	789624	4	774,121,121,475,	0,1445,3555,4164,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	93446923	93451208	chr9:93446923-93451208	0	-	93446923	93446923	8553170	4	774,121,121,264,	0,1445,3555,4021,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	93447267	93451114	chr9:93447267-93451114	0	-	93447267	93447267	8553170	4	430,121,109,170,	0,1101,3211,3677,
#Partially deleted in new
chr9	93447634	93450983	chr9:93447634-93450983	0	-	93447634	93450755	789624	3	63,121,242,	0,2844,3107,
#Partially deleted in new
chr9	93451721	93566107	chr9:93451721-93566107	3	+	93451915	93564540	789624	18	668,247,83,129,97,101,287,88,228,175,250,115,210,184,138,142,97,1879,	0,19419,24534,45749,47068,63945,64261,75433,77631,80433,91500,98855,104660,106105,106859,109387,110486,112507,
#Partially deleted in new
chr9	93451890	93531406	chr9:93451890-93531406	1	+	93451915	93529733	789624	9	499,247,83,129,97,101,287,88,2054,	0,19250,24365,45580,46899,63776,64092,75264,77462,
#Partially deleted in new
chr9	93452383	93532589	chr9:93452383-93532589	0	+	93452383	93532376	789624	10	6,247,83,129,97,101,287,88,228,435,	0,18757,23872,45087,46406,63283,63599,74771,76969,79771,
#Deleted in new
chr9	93529469	93532584	chr9:93529469-93532584	0	+	93529469	93529469	8553170	3	111,21,430,	0,1241,2685,
#Partially deleted in new
chr9	93532154	93564765	chr9:93532154-93564765	0	+	93532154	93564540	789624	8	175,250,115,210,184,142,97,537,	0,11067,18422,24227,25672,28954,30053,32074,
#Partially deleted in new
chr9	93576406	93679587	chr9:93576406-93679587	3	+	93576773	93677676	0	22	465,86,115,161,142,187,163,88,107,92,90,369,120,119,179,71,161,278,96,110,370,2000,	0,53563,60004,69222,72664,76772,78006,79527,80082,81738,83104,83785,86500,87110,89279,89583,90673,97178,98520,99273,100187,101181,
#Partially deleted in new
chr9	93576626	93679587	chr9:93576626-93679587	1	+	93576830	93677676	789624	9	245,86,59,6,73,96,110,370,2000,	0,53343,59784,76640,97163,98300,99053,99967,100961,
#Partially deleted in new
chr9	93576746	93679583	chr9:93576746-93679583	1	+	93576773	93677676	789624	8	125,86,55,83,96,110,370,1996,	0,53223,59664,97033,98180,98933,99847,100841,
#Partially deleted in new
chr9	93819356	93819421	chr9:93819356-93819421	3	+	93819356	93819356	5263520	1	65,	0,
#Deleted in new
chr9	93857082	93858333	chr9:93857082-93858333	3	+	93857082	93857082	8553170	2	168,223,	0,1028,
#Deleted in new
chr9	93951621	93955372	chr9:93951621-93955372	3	-	93952163	93955146	0	4	707,85,292,449,	0,1107,1274,3302,
#Deleted in new
chr9	93951626	93953431	chr9:93951626-93953431	1	-	93952163	93952948	0	3	702,85,536,	0,1102,1269,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	93955596	93959140	chr9:93955596-93959140	3	+	93955596	93955596	8553170	3	44,48,215,	0,1916,3329,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	93955833	93957922	chr9:93955833-93957922	1	+	93955833	93955833	789624	2	1035,410,	0,1679,
#Partially deleted in new
chr9	94030793	94109856	chr9:94030793-94109856	1	+	94064739	94107944	789624	10	334,88,172,81,119,138,1259,186,111,2029,	0,33940,54457,57037,57351,64523,66527,70772,73481,77034,
#Partially deleted in new
chr9	94031026	94109842	chr9:94031026-94109842	3	+	94064739	94107944	8553170	11	101,62,88,172,81,119,138,1259,186,111,2015,	0,26091,33707,54224,56804,57118,64290,66294,70539,73248,76801,
#Deleted in new
chr9	94038029	94038345	chr9:94038029-94038345	7	+	94038029	94038029	16724991	1	316,	0,
#Partially deleted in new
chr9	94084428	94109852	chr9:94084428-94109852	1	+	94084530	94107944	789624	9	346,172,81,119,138,1259,186,111,2025,	0,822,3402,3716,10888,12892,17137,19846,23399,
#Partially deleted in new
chr9	94084463	94109854	chr9:94084463-94109854	1	+	94084530	94107944	789624	9	305,172,81,119,138,1259,186,111,2027,	0,787,3367,3681,10853,12857,17102,19811,23364,
#Partially deleted in new
chr9	94100086	94107912	chr9:94100086-94107912	0	+	94100086	94100086	8553170	3	1665,111,85,	0,4188,7741,
#Partially deleted in new
chr9	94175956	94176036	chr9:94175956-94176036	3	+	94175956	94175956	5263520	1	80,	0,
#Partially deleted in new
chr9	94176346	94176433	chr9:94176346-94176433	3	+	94176346	94176346	5263520	1	87,	0,
#Partially deleted in new
chr9	94176457	94177892	chr9:94176457-94177892	3	+	94176457	94176457	8553170	1	1435,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	94176601	94204568	chr9:94176601-94204568	0	-	94176601	94176601	789624	3	1130,54,76,	0,22596,27891,
#Partially deleted in new
chr9	94178833	94178920	chr9:94178833-94178920	3	+	94178833	94178833	5263520	1	87,	0,
#Partially deleted in new
chr9	94259310	94301454	chr9:94259310-94301454	3	+	94278812	94301370	789624	5	35,88,127,96,1640,	0,19447,33030,33663,40504,
#Partially deleted in new
chr9	94259320	94292623	chr9:94259320-94292623	0	+	94259320	94259320	8553170	3	25,88,283,	0,19437,33020,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	94259327	94301454	chr9:94259327-94301454	1	+	94278812	94299569	789624	5	18,88,127,96,2007,	0,19430,33013,33646,40120,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	94278757	94295846	chr9:94278757-94295846	1	+	94278812	94293521	789624	4	88,127,96,2405,	0,13583,14216,14684,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	94278757	94294454	chr9:94278757-94294454	1	+	94278812	94293194	789624	3	88,127,1481,	0,13583,14216,
#Partially deleted in new
chr9	94287698	94288550	chr9:94287698-94288550	7	-	94287698	94287698	16724991	1	852,	0,
#Partially deleted in new
chr9	94318195	94328644	chr9:94318195-94328644	3	-	94318464	94328623	789624	7	1055,117,386,140,129,697,37,	0,1417,2012,2897,4005,7042,10412,
#Partially deleted in new
chr9	94318195	94328644	chr9:94318195-94328644	1	-	94318464	94328623	789624	8	1055,117,224,117,140,129,697,37,	0,1417,2012,2281,2897,4005,7042,10412,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	94332475	94360948	chr9:94332475-94360948	3	+	94332475	94332475	789624	3	513,185,1464,	0,6360,27009,
#Deleted in new
chr9	94338346	94338733	chr9:94338346-94338733	7	-	94338346	94338346	16724991	1	387,	0,
#Deleted in new
chr9	94347233	94347563	chr9:94347233-94347563	7	-	94347233	94347233	16724991	1	330,	0,
#Partially deleted in new
chr9	94374550	94461042	chr9:94374550-94461042	3	+	94374819	94459412	789624	12	377,96,63,128,115,219,114,72,113,98,143,1882,	0,40607,54638,63850,66434,70413,72272,76905,79407,81689,83771,84610,
#Partially deleted in new
chr9	94432630	94433273	chr9:94432630-94433273	7	-	94432630	94432630	16724991	1	643,	0,
#Partially deleted in new
chr9	94446853	94460919	chr9:94446853-94460919	1	+	94451497	94459243	789624	7	83,72,113,98,56,93,1760,	0,4602,7104,9386,11461,11518,12306,
#Partially deleted in new
chr9	94496274	94512879	chr9:94496274-94512879	7	+	94496274	94496274	16724991	5	105,95,117,107,77,	0,1781,6250,13202,16528,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	94507737	94507844	chr9:94507737-94507844	3	+	94507737	94507737	8553170	1	107,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	94555053	94603990	chr9:94555053-94603990	3	+	94555053	94555053	8553170	9	257,184,71,96,489,170,286,88,701,	0,3915,17925,21573,22251,31601,38710,40737,48236,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	94555068	94568127	chr9:94555068-94568127	0	+	94555068	94555068	789624	3	242,184,738,	0,3900,12321,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	94555082	94570916	chr9:94555082-94570916	1	+	94555082	94555082	8553170	3	263,184,3527,	0,3886,12307,
#Partially deleted in new
chr9	94558719	94593793	chr9:94558719-94593793	3	-	94558937	94593726	0	7	413,120,138,141,93,163,237,	0,4622,8550,12742,25857,28587,34837,
#Partially deleted in new
chr9	94603132	94639507	chr9:94603132-94639507	1	-	94603380	94639310	0	7	440,120,138,141,93,163,367,	0,2324,3682,6788,14635,17196,36008,
#Partially deleted in new
chr9	94603132	94638413	chr9:94603132-94638413	1	-	94603380	94638410	8553170	6	440,120,138,141,163,71,	0,2324,3682,6788,17196,35210,
#Partially deleted in new
chr9	94603140	94640249	chr9:94603140-94640249	3	-	94603380	94639310	0	8	432,120,138,141,93,163,194,206,	0,2316,3674,6780,14627,17188,36000,36903,
#Partially deleted in new
chr9	94606814	94640137	chr9:94606814-94640137	0	-	94606814	94620409	789624	5	138,141,93,163,94,	0,3106,10953,13514,33229,
#Partially deleted in new
chr9	94726700	94931833	chr9:94726700-94931833	1	+	94759783	94931754	789624	8	51,932,167,154,246,190,107,119,	0,32948,46301,66064,74056,197285,201724,205014,
#Partially deleted in new
chr9	94726711	95087159	chr9:94726711-95087159	1	+	94759783	95082715	789624	15	40,932,167,154,246,103,108,44,61,63,75,117,87,145,478,	0,32937,46290,66053,74045,228465,229196,241046,252655,278446,278830,333982,353982,355863,359970,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr9	94759648	95087218	chr9:94759648-95087218	3	+	94759783	95082715	789624	16	932,167,154,246,190,107,103,108,44,61,63,75,117,87,145,537,	0,13353,33116,41108,164337,168776,195528,196259,208109,219718,245509,245893,301045,321045,322926,327033,
#Partially deleted in new
chr9	94760161	94763411	chr9:94760161-94763411	0	+	94760161	94763130	789624	2	419,285,	0,2965,
#Partially deleted in new
chr9	94760305	94773255	chr9:94760305-94773255	0	+	94760305	94760305	8553170	2	428,254,	0,12696,
#Partially deleted in new
chr9	94760314	95080894	chr9:94760314-95080894	0	+	94760314	95080816	789624	12	266,167,154,246,103,108,44,61,63,75,117,201,	0,12687,32450,40442,194862,195593,207443,219052,244843,245227,300379,320379,
#Partially deleted in new
chr9	94760437	95087159	chr9:94760437-95087159	0	+	94760437	95082715	789624	16	143,167,154,246,190,107,103,108,44,61,63,75,117,87,145,478,	0,12564,32327,40319,163548,167987,194739,195470,207320,218929,244720,245104,300256,320256,322137,326244,
#Deleted in new
chr9	94809961	94810057	chr9:94809961-94810057	3	+	94809961	94809961	5263520	1	96,	0,
#Deleted in new
chr9	94824271	94824773	chr9:94824271-94824773	3	+	94824271	94824271	8553170	2	111,313,	0,189,
#Partially deleted in new
chr9	94900428	94904754	chr9:94900428-94904754	3	+	94900428	94900428	8553170	3	27,88,664,	0,378,3662,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	94920214	94935356	chr9:94920214-94935356	0	+	94920214	94920214	8553170	4	121,190,107,793,	0,3771,8210,14349,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	94921203	94933671	chr9:94921203-94933671	0	+	94921203	94921203	8553170	4	142,190,107,1957,	0,2782,7221,10511,
#Partially deleted in new
chr9	94921208	95080756	chr9:94921208-95080756	0	+	94921208	94921208	8553170	10	137,190,103,108,44,61,63,75,117,63,	0,2777,33968,34699,46549,58158,83949,84333,139485,159485,
#Partially deleted in new
chr9	94921259	95082592	chr9:94921259-95082592	0	+	94921259	94921259	8553170	11	86,190,107,103,108,44,61,63,75,87,18,	0,2726,7165,33917,34648,46498,58107,83898,84282,159434,161315,
#Partially deleted in new
chr9	94928550	94934946	chr9:94928550-94934946	3	-	94928550	94928550	8553170	2	313,174,	0,6222,
#Partially deleted in new
chr9	94955945	95006200	chr9:94955945-95006200	0	+	94955945	95006122	789624	6	70,44,61,63,75,201,	0,11812,23421,49212,49596,50054,
#Partially deleted in new
chr9	94964368	94965624	chr9:94964368-94965624	3	-	94964368	94964368	8553170	2	58,497,	0,759,
#Partially deleted in new
chr9	94967783	95060919	chr9:94967783-95060919	0	+	94967783	94967783	8553170	5	18,61,63,75,226,	0,11583,37374,37758,92910,
#Partially deleted in new
chr9	95003916	95060987	chr9:95003916-95060987	0	+	95003916	95003916	8553170	4	370,63,75,294,	0,1241,1625,56777,
#Partially deleted in new
chr9	95004979	95086731	chr9:95004979-95086731	0	+	95004979	95004979	8553170	6	86,63,75,117,87,50,	0,178,562,55714,75714,81702,
#Partially deleted in new
chr9	95004995	95083035	chr9:95004995-95083035	0	+	95004995	95082715	789624	6	70,63,75,117,87,461,	0,162,546,55698,75698,77579,
#Partially deleted in new
chr9	95005007	95086841	chr9:95005007-95086841	0	+	95005007	95082715	789624	8	58,63,75,117,87,145,190,160,	0,150,534,55686,75686,77567,80922,81674,
#Partially deleted in new
chr9	95005012	95022277	chr9:95005012-95022277	0	+	95005012	95005012	8553170	5	53,63,75,784,600,	0,145,529,14437,16665,
#Partially deleted in new
chr9	95005096	95087052	chr9:95005096-95087052	0	+	95005096	95005096	8553170	6	124,75,117,87,145,371,	0,445,55597,75597,77478,81585,
#Partially deleted in new
chr9	95018890	95022285	chr9:95018890-95022285	0	+	95018890	95018890	8553170	2	1343,608,	0,2787,
#Partially deleted in new
chr9	95048767	95082728	chr9:95048767-95082728	0	+	95048767	95048767	8553170	4	288,117,87,154,	0,11926,31926,33807,
#Partially deleted in new
chr9	95056269	95086918	chr9:95056269-95086918	0	+	95056269	95056269	8553170	5	263,117,87,145,237,	0,4424,24424,26305,30412,
#Deleted in new
chr9	95065349	95065446	chr9:95065349-95065446	3	+	95065349	95065349	5263520	1	97,	0,
#Deleted in new
chr9	95085207	95085304	chr9:95085207-95085304	3	+	95085207	95085207	5263520	1	97,	0,
#Deleted in new
chr9	95085444	95085541	chr9:95085444-95085541	3	+	95085444	95085444	5263520	1	97,	0,
#Deleted in new
chr9	95086013	95086094	chr9:95086013-95086094	3	-	95086013	95086013	5263520	1	81,	0,
#Deleted in new
chr9	95086020	95086088	chr9:95086020-95086088	3	+	95086020	95086020	5263520	1	68,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr9	95099053	95317709	chr9:95099053-95317709	3	-	95101706	95249291	789624	15	2797,204,175,82,76,100,53,157,165,65,111,95,85,243,184,	0,8012,12409,15575,18261,26032,27475,36292,50869,72025,72983,141595,148378,150073,218472,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr9	95099054	95317254	chr9:95099054-95317254	1	-	95101706	95249291	789624	15	2796,204,175,82,76,100,53,157,165,65,111,95,85,243,126,	0,8011,12408,15574,18260,26031,27474,36291,50868,72024,72982,141594,148377,150072,218074,
#Partially deleted in new
chr9	95101709	95249291	chr9:95101709-95249291	0	-	95186630	95249291	789624	15	141,204,175,82,76,100,53,157,165,65,111,145,95,85,165,	0,5356,9753,12919,15605,23376,24819,33636,48213,69369,70327,84791,138939,145722,147417,
#Partially deleted in new
chr9	95107100	95126918	chr9:95107100-95126918	0	-	95107100	95107100	8553170	7	169,175,82,76,100,53,170,	0,4362,7528,10214,17985,19428,19648,
#Partially deleted in new
chr9	95107347	95135373	chr9:95107347-95135373	0	-	95107347	95107347	8553170	7	166,175,82,76,100,53,28,	0,4115,7281,9967,17738,19181,27998,
#Partially deleted in new
chr9	95109596	95135543	chr9:95109596-95135543	0	-	95109596	95109596	8553170	7	158,175,82,76,100,53,198,	0,1866,5032,7718,15489,16932,25749,
#Partially deleted in new
chr9	95110511	95317671	chr9:95110511-95317671	1	-	95111195	95249291	789624	14	834,175,82,76,100,53,157,165,65,111,95,85,243,146,	0,951,4117,6803,14574,16017,24834,39411,60567,61525,130137,136920,138615,207014,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	95113707	95114461	chr9:95113707-95114461	3	+	95113707	95113707	8553170	2	42,487,	0,267,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	95114134	95127420	chr9:95114134-95127420	0	-	95114134	95114134	8553170	4	576,76,100,892,	0,3180,10951,12394,
#Partially deleted in new
chr9	95123520	95123868	chr9:95123520-95123868	7	+	95123520	95123520	16724991	1	348,	0,
#Partially deleted in new
chr9	95132894	95240708	chr9:95132894-95240708	0	-	95132894	95132894	8553170	6	214,157,165,65,111,60,	0,2451,17028,38184,39142,107754,
#Deleted in new
chr9	95142448	95142541	chr9:95142448-95142541	7	-	95142448	95142448	16724991	1	93,	0,
#Partially deleted in new
chr9	95145269	95150033	chr9:95145269-95150033	0	-	95145269	95145269	8553170	2	249,111,	0,4653,
#Partially deleted in new
chr9	95150014	95426742	chr9:95150014-95426742	0	-	95150014	95150014	8553170	7	73,65,111,95,85,204,19,	0,21064,22022,90634,97417,99112,276709,
#Partially deleted in new
chr9	95171115	95317709	chr9:95171115-95317709	0	-	95186592	95249291	789624	7	28,111,95,95,85,243,184,	0,921,15385,69533,76316,78011,146410,
#Partially deleted in new
chr9	95172042	95316894	chr9:95172042-95316894	0	-	95172042	95249291	789624	5	105,95,85,243,63,	0,68606,75389,77084,144789,
#Partially deleted in new
chr9	95172085	95316884	chr9:95172085-95316884	0	-	95172085	95249291	8553170	5	62,95,85,243,89,	0,68563,75346,77041,144710,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	95185189	95254364	chr9:95185189-95254364	0	-	95221062	95249291	789624	6	1456,144,95,85,243,91,	0,35732,55459,62242,63937,69084,
#Partially deleted in new
chr9	95186530	95316933	chr9:95186530-95316933	0	-	95186530	95186530	8553170	5	115,95,85,243,102,	0,54118,60901,62596,130301,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	95205949	95316152	chr9:95205949-95316152	0	-	95205949	95205949	8553170	8	133,95,85,243,159,255,114,1032,	0,34699,41482,43177,59646,87667,104292,109171,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	95234671	95249291	chr9:95234671-95249291	1	-	95234790	95249291	8553170	4	170,95,85,165,	0,5977,12760,14455,
#Partially deleted in new
chr9	95247506	95317691	chr9:95247506-95317691	0	-	95247506	95249291	8553170	4	10,243,159,166,	0,1620,18089,70019,
#Partially deleted in new
chr9	95292337	95294810	chr9:95292337-95294810	7	+	95292337	95292337	16724991	1	2473,	0,
#Deleted in new
chr9	95406989	95407662	chr9:95406989-95407662	3	-	95406989	95406989	8553170	1	673,	0,
#Deleted in new
chr9	95413266	95413449	chr9:95413266-95413449	7	-	95413266	95413266	16724991	1	183,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	95414833	95426796	chr9:95414833-95426796	0	-	95414833	95414833	8553170	2	1331,73,	0,11890,
#Partially deleted in new
chr9	95442979	95508661	chr9:95442979-95508661	3	-	95446911	95508361	789624	24	3412,541,255,100,143,138,281,184,143,310,403,119,126,99,156,132,148,122,199,92,70,190,193,501,	0,3931,6089,6861,10498,13296,15033,16620,18876,24136,25771,26833,33054,33779,34567,35075,36020,36989,37410,38969,39154,42705,63427,65181,
#Partially deleted in new
chr9	95442983	95507199	chr9:95442983-95507199	1	-	95446911	95485815	789624	24	3408,541,255,100,143,138,281,184,143,310,403,119,126,99,156,132,148,122,199,92,70,190,193,263,	0,3927,6085,6857,10494,13292,15029,16616,18872,24132,25767,26829,33050,33775,34563,35071,36016,36985,37406,38965,39150,42701,63423,63953,
#Partially deleted in new
chr9	95442983	95508040	chr9:95442983-95508040	1	-	95446911	95485815	789624	24	3408,541,255,100,143,138,281,184,143,310,403,119,126,99,156,132,148,122,199,92,70,190,193,107,	0,3927,6085,6857,10494,13292,15029,16616,18872,24132,25767,26829,33050,33775,34563,35071,36016,36985,37406,38965,39150,42701,63423,64950,
#Partially deleted in new
chr9	95442983	95516965	chr9:95442983-95516965	1	-	95446911	95516471	789624	24	3408,541,255,100,143,138,281,184,143,310,403,119,126,99,156,132,148,122,199,92,70,190,193,497,	0,3927,6085,6857,10494,13292,15029,16616,18872,24132,25767,26829,33050,33775,34563,35071,36016,36985,37406,38965,39150,42701,63423,73485,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr9	95443411	95506599	chr9:95443411-95506599	0	-	95474047	95506599	789624	21	2980,541,255,3780,138,281,184,143,310,403,119,132,126,99,156,132,148,122,199,190,193,	0,3499,5657,6429,12864,14601,16188,18444,23704,25339,26401,30600,32622,33347,34135,34643,35588,36557,36978,42273,62995,
#Partially deleted in new
chr9	95443411	95517057	chr9:95443411-95517057	1	-	95446911	95516471	789624	23	4040,255,100,143,138,281,184,143,310,403,119,126,99,156,132,148,122,199,92,70,190,193,589,	0,5657,6429,10066,12864,14601,16188,18444,23704,25339,26401,32622,33347,34135,34643,35588,36557,36978,38537,38722,42273,62995,73057,
#Partially deleted in new
chr9	95443411	95449936	chr9:95443411-95449936	0	-	95443411	95443411	8553170	3	2980,541,868,	0,3499,5657,
#Partially deleted in new
chr9	95444161	95507417	chr9:95444161-95507417	1	-	95446911	95485815	789624	24	2230,541,255,100,143,138,281,184,143,310,403,119,126,99,156,132,148,122,199,92,70,190,193,189,	0,2749,4907,5679,9316,12114,13851,15438,17694,22954,24589,25651,31872,32597,33385,33893,34838,35807,36228,37787,37972,41523,62245,63067,
#Partially deleted in new
chr9	95446158	95516965	chr9:95446158-95516965	1	-	95446911	95516820	789624	24	233,541,255,100,143,138,281,184,143,310,403,119,126,99,156,132,148,122,199,92,70,190,193,343,	0,752,2910,3682,7319,10117,11854,13441,15697,20957,22592,23654,29875,30600,31388,31896,32841,33810,34231,35790,35975,39526,60248,70464,
#Deleted in new
chr9	95456406	95459955	chr9:95456406-95459955	0	-	95456406	95456406	8553170	4	7,281,184,53,	0,1606,3193,3496,
#Partially deleted in new
chr9	95467286	95469189	chr9:95467286-95469189	0	-	95467286	95467286	8553170	2	139,439,	0,1464,
#Partially deleted in new
chr9	95468937	95480485	chr9:95468937-95480485	0	-	95468937	95480485	789624	8	216,119,126,99,132,148,122,96,	0,875,7096,7821,9117,10062,11031,11452,
#Deleted in new
chr9	95479855	95480455	chr9:95479855-95480455	0	-	95479855	95479855	8553170	2	235,66,	0,534,
#Partially deleted in new
chr9	95479995	95506665	chr9:95479995-95506665	0	-	95479995	95480494	789624	3	95,199,259,	0,394,26411,
#Partially deleted in new
chr9	95480060	95508040	chr9:95480060-95508040	0	-	95480060	95485815	789624	7	30,199,92,70,190,193,90,	0,329,1888,2073,5624,26346,27890,
#Partially deleted in new
chr9	95480060	95508040	chr9:95480060-95508040	0	-	95480060	95485815	789624	7	30,199,92,70,190,193,107,	0,329,1888,2073,5624,26346,27873,
#Partially deleted in new
chr9	95480060	95507266	chr9:95480060-95507266	0	-	95480060	95485815	789624	7	30,199,92,70,190,193,35,	0,329,1888,2073,5624,26346,27171,
#Partially deleted in new
chr9	95480060	95507199	chr9:95480060-95507199	0	-	95480060	95485815	789624	7	30,199,92,70,190,193,263,	0,329,1888,2073,5624,26346,26876,
#Partially deleted in new
chr9	95480439	95503346	chr9:95480439-95503346	0	-	95480439	95480439	8553170	5	149,92,70,190,47,	0,1509,1694,5245,22860,
#Partially deleted in new
chr9	95480538	95506599	chr9:95480538-95506599	0	-	95480538	95480538	8553170	2	50,193,	0,25868,
#Partially deleted in new
chr9	95480538	95506599	chr9:95480538-95506599	0	-	95482036	95485815	789624	5	50,92,105,190,193,	0,1410,1595,5146,25868,
#Partially deleted in new
chr9	95480543	95494401	chr9:95480543-95494401	0	-	95480543	95480543	8553170	5	45,92,70,190,140,	0,1405,1590,5141,13718,
#Partially deleted in new
chr9	95481828	95517057	chr9:95481828-95517057	1	-	95481944	95516471	789624	5	212,70,190,193,589,	0,305,3856,24578,34640,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	95481828	95484309	chr9:95481828-95484309	0	-	95481828	95481828	8553170	2	212,2176,	0,305,
#Partially deleted in new
chr9	95481965	95506610	chr9:95481965-95506610	0	-	95481965	95485815	789624	4	75,70,190,204,	0,168,3719,24441,
#Partially deleted in new
chr9	95481970	95516658	chr9:95481970-95516658	0	-	95485859	95516658	789624	4	70,70,190,36,	0,163,3714,34652,
#Partially deleted in new
chr9	95485823	95516658	chr9:95485823-95516658	0	-	95485823	95485823	8553170	2	51,190,	0,30645,
#Deleted in new
chr9	95494923	95495379	chr9:95494923-95495379	3	+	95494923	95494923	8553170	1	456,	0,
#Deleted in new
chr9	95506234	95507636	chr9:95506234-95507636	3	+	95506234	95506234	8553170	1	1402,	0,
#Deleted in new
chr9	95514044	95514520	chr9:95514044-95514520	3	+	95514044	95514044	8553170	1	476,	0,
#Partially deleted in new
chr9	95599437	95606326	chr9:95599437-95606326	3	-	95599437	95599437	8553170	3	728,189,105,	0,2533,6784,
#Partially deleted in new
chr9	95599544	95606286	chr9:95599544-95606286	0	-	95599544	95599544	8553170	3	141,189,65,	0,2426,6677,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	95650153	95715718	chr9:95650153-95715718	0	+	95650153	95650153	8553170	2	88,315,	0,65250,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	95650161	95715697	chr9:95650161-95715697	3	+	95650161	95650161	8553170	3	80,109,294,	0,34981,65242,
#Deleted in new
chr9	95652911	95653266	chr9:95652911-95653266	7	+	95652911	95652911	16724991	1	355,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	95759230	95875480	chr9:95759230-95875480	3	-	95759230	95759230	8553170	4	294,115,130,501,	0,491,14657,115749,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	95772322	95774734	chr9:95772322-95774734	1	+	95772322	95772322	8553170	1	2412,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	95772588	95776282	chr9:95772588-95776282	3	+	95772588	95772588	8553170	2	154,1507,	0,2187,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	95813292	95875977	chr9:95813292-95875977	0	-	95813292	95813292	789624	3	630,66,113,	0,36934,62572,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	95840599	95875587	chr9:95840599-95875587	1	-	95840599	95840599	8553170	3	2151,66,608,	0,9627,34380,
#Deleted in new
chr9	95859903	95860016	chr9:95859903-95860016	3	+	95859903	95859903	8553170	1	113,	0,
#Partially deleted in new
chr9	95869839	95875270	chr9:95869839-95875270	0	-	95869839	95869839	8553170	2	602,291,	0,5140,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	95870282	95875070	chr9:95870282-95875070	0	-	95870282	95870282	8553170	3	159,40,91,	0,4226,4697,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	95870283	95875976	chr9:95870283-95875976	1	-	95870283	95870283	789624	3	158,114,997,	0,4225,4696,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr9	95875700	95968840	chr9:95875700-95968840	3	+	95876005	95966720	789624	14	384,425,123,194,162,208,141,114,120,72,146,96,100,2279,	0,5168,22148,31377,39967,40526,45474,46604,47559,52378,53018,65753,80213,90861,
#Partially deleted in new
chr9	95876142	95967160	chr9:95876142-95967160	0	+	95876142	95876142	8553170	15	963,425,123,123,194,162,208,141,114,120,72,146,96,100,599,	0,4726,21706,30445,30935,39525,40084,45032,46162,47117,51936,52576,65311,79771,90419,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	95905004	95905141	chr9:95905004-95905141	7	+	95905004	95905004	16724991	1	137,	0,
#Partially deleted in new
chr9	95915800	95967162	chr9:95915800-95967162	0	+	95915800	95954899	789624	11	29,208,141,114,120,72,146,96,195,100,601,	0,426,5374,6504,7459,12278,12918,25653,38927,40113,50761,
#Deleted in new
chr9	95918135	95918704	chr9:95918135-95918704	7	+	95918135	95918135	16724991	1	569,	0,
#Partially deleted in new
chr9	95922401	96004855	chr9:95922401-96004855	0	+	95922401	95928177	789624	13	17,120,127,146,96,195,100,153,167,81,1156,155,336,	0,858,5749,6317,19052,32326,33512,44160,45057,48174,49531,55659,82118,
#Partially deleted in new
chr9	95923352	95929117	chr9:95923352-95929117	0	+	95923352	95928868	789624	3	27,72,399,	0,4726,5366,
#Partially deleted in new
chr9	95941503	95971968	chr9:95941503-95971968	0	+	95941503	95941503	8553170	6	46,100,153,81,52,36,	0,14410,25058,29072,30040,30429,
#Partially deleted in new
chr9	95966649	95972332	chr9:95966649-95972332	0	+	95966649	95972332	789624	3	65,81,400,	0,3926,5283,
#Partially deleted in new
chr9	95972836	96014571	chr9:95972836-96014571	0	+	95972836	96013203	789624	4	252,155,182,2347,	0,5224,31683,39388,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	96019723	96021811	chr9:96019723-96021811	0	-	96019723	96019723	789624	2	1558,227,	0,1861,
#Partially deleted in new
chr9	96020770	96027960	chr9:96020770-96027960	0	-	96020770	96020770	8553170	2	511,296,	0,6894,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	96023259	96027993	chr9:96023259-96027993	1	-	96023259	96023259	8553170	2	2735,329,	0,4405,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	96023277	96027966	chr9:96023277-96027966	0	-	96023277	96023277	8553170	2	2553,302,	0,4387,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	96023298	96027960	chr9:96023298-96027960	0	-	96023298	96023298	8553170	2	2696,87,	0,4575,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	96023424	96027959	chr9:96023424-96027959	2	-	96023424	96023424	8553170	2	2406,86,	0,4449,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	96095210	96101912	chr9:96095210-96101912	3	+	96095210	96095210	8553170	6	102,204,143,65,267,796,	0,2141,3671,4776,5059,5906,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	96103078	96103174	chr9:96103078-96103174	3	-	96103078	96103078	8553170	1	96,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	96106660	96116411	chr9:96106660-96116411	3	-	96106660	96106660	789624	3	2376,120,166,	0,7974,9585,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	96106749	96116408	chr9:96106749-96116408	0	-	96106749	96106749	8553170	3	2287,120,179,	0,8891,9480,
#Deleted in new
chr9	96146006	96147856	chr9:96146006-96147856	7	+	96146006	96146006	16724991	1	1850,	0,
#Partially deleted in new
chr9	96235305	96302176	chr9:96235305-96302176	3	-	96235459	96302104	789624	11	265,150,66,82,35,36,68,108,76,47,226,	0,5452,9023,10039,11250,14445,16112,17497,19562,63110,66645,
#Partially deleted in new
chr9	96235305	96249786	chr9:96235305-96249786	0	-	96235305	96235305	8553170	5	265,150,104,82,36,	0,5452,8985,10039,14445,
#Partially deleted in new
chr9	96235309	96302176	chr9:96235309-96302176	0	-	96252886	96302104	8553170	10	261,150,66,82,35,36,68,108,47,226,	0,5448,9019,10035,11246,14441,16108,17493,63106,66641,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr9	96235330	96309098	chr9:96235330-96309098	0	-	96235330	96235330	8553170	16	240,150,66,82,35,36,143,190,135,68,108,76,47,361,118,145,	0,5427,8998,10014,11225,14420,14579,14965,15796,16087,17472,19537,63085,66620,69943,73623,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr9	96235335	96314276	chr9:96235335-96314276	0	-	96235335	96235335	8553170	16	235,150,88,82,35,36,576,135,68,108,76,47,361,118,173,311,	0,5422,8993,10009,11220,14415,14574,15791,16082,17467,19532,63080,66615,69938,73618,78630,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr9	96235351	96352058	chr9:96235351-96352058	3	-	96321241	96352058	789624	22	219,150,66,82,35,36,68,108,76,47,361,118,173,934,344,83,79,68,93,103,69,21,	0,5406,8977,9993,11204,14399,16066,17451,19516,63064,66599,69922,73602,78614,85646,86646,88739,101365,108552,109947,115751,116686,
#Partially deleted in new
chr9	96235459	96302104	chr9:96235459-96302104	1	-	96235459	96302104	789624	10	111,66,82,35,36,68,108,76,47,154,	0,8869,9885,11096,14291,15958,17343,19408,62956,66491,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	96235462	96302104	chr9:96235462-96302104	0	-	96239927	96302104	789624	12	108,138,150,66,82,35,36,68,108,76,47,154,	0,4360,5295,8866,9882,11093,14288,15955,17340,19405,62953,66488,
#Partially deleted in new
chr9	96235462	96302104	chr9:96235462-96302104	0	-	96244350	96302104	789624	6	108,150,66,82,47,154,	0,5295,8866,9882,62953,66488,
#Partially deleted in new
chr9	96235462	96302104	chr9:96235462-96302104	0	-	96244350	96302104	789624	9	108,150,66,82,68,108,76,47,154,	0,5295,8866,9882,15955,17340,19405,62953,66488,
#Partially deleted in new
chr9	96235547	96302142	chr9:96235547-96302142	0	-	96235547	96302104	8553170	10	23,150,66,82,35,36,68,76,47,192,	0,5210,8781,9797,11008,14203,15870,19320,62868,66403,
#Partially deleted in new
chr9	96239326	96244351	chr9:96239326-96244351	0	-	96239326	96239326	8553170	3	345,150,23,	0,1431,5002,
#Partially deleted in new
chr9	96246461	96250393	chr9:96246461-96250393	3	+	96246461	96246461	8553170	3	148,113,811,	0,761,3121,
#Partially deleted in new
chr9	96249552	96302122	chr9:96249552-96302122	1	-	96250464	96302104	789624	6	933,68,108,76,47,172,	0,1865,3250,5315,48863,52398,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	96256215	96256319	chr9:96256215-96256319	3	-	96256215	96256215	8553170	1	104,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	96313443	96364537	chr9:96313443-96364537	0	-	96363273	96364537	8553170	12	1456,344,83,79,68,93,103,69,72,68,170,74,	0,7554,8554,10647,23273,30460,31855,37659,38594,46710,49774,51020,
#Partially deleted in new
chr9	96320705	96383710	chr9:96320705-96383710	3	-	96321241	96383634	789624	12	636,83,79,68,93,103,69,72,68,87,34,234,	0,1292,3385,16011,23198,24593,30397,31332,39448,43758,47566,62771,
#Partially deleted in new
chr9	96320709	96383689	chr9:96320709-96383689	1	-	96321241	96383634	789624	9	632,83,79,69,72,68,87,34,213,	0,1288,3381,30393,31328,39444,43754,47562,62767,
#Partially deleted in new
chr9	96320997	96360192	chr9:96320997-96360192	0	-	96321284	96360192	8553170	8	344,79,68,93,103,69,72,39,	0,3093,15719,22906,24301,30105,31040,39156,
#Partially deleted in new
chr9	96345394	96383680	chr9:96345394-96383680	0	-	96345394	96345394	8553170	9	7,69,72,141,68,87,34,83,204,	0,5708,6643,12016,14759,19069,22877,28605,38082,
#Partially deleted in new
chr9	96350748	96383678	chr9:96350748-96383678	1	-	96351098	96383634	789624	6	423,72,68,87,34,202,	0,1289,9405,13715,17523,32728,
#Partially deleted in new
chr9	96385940	96418329	chr9:96385940-96418329	3	-	96388236	96418032	789624	5	2519,139,120,151,717,	0,6457,8882,12223,31672,
#Deleted in new
chr9	96407283	96407797	chr9:96407283-96407797	7	+	96407283	96407283	16724991	1	514,	0,
#Partially deleted in new
chr9	96450200	96491336	chr9:96450200-96491336	1	+	96450279	96490038	789624	5	428,163,172,186,1355,	0,8178,34261,37888,39781,
#Partially deleted in new
chr9	96450204	96491336	chr9:96450204-96491336	3	+	96450279	96490038	789624	8	424,163,162,69,84,172,186,1355,	0,8174,15132,15505,20806,34257,37884,39777,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	96483024	96491336	chr9:96483024-96491336	0	+	96483024	96483024	8553170	3	1609,186,1355,	0,5064,6957,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr9	96490240	96619830	chr9:96490240-96619830	0	-	96496286	96619378	0	14	3012,153,98,160,139,231,88,63,67,77,93,76,91,612,	0,5966,32265,33020,33346,43686,44214,48837,51585,61555,72452,74536,75152,128978,
#Partially deleted in new
chr9	96500107	96619363	chr9:96500107-96619363	0	-	96515677	96619363	789624	15	3682,117,144,98,160,139,231,88,63,67,77,93,76,91,145,	0,9565,15541,22398,23153,23479,33819,34347,38970,41718,51688,62585,64669,65285,119111,
#Partially deleted in new
chr9	96500112	96619830	chr9:96500112-96619830	1	-	96503752	96619378	0	14	3677,117,98,160,139,231,88,63,67,77,93,76,91,612,	0,9560,22393,23148,23474,33814,34342,38965,41713,51683,62580,64664,65280,119106,
#Partially deleted in new
chr9	96502585	96619378	chr9:96502585-96619378	1	-	96503752	96619378	0	13	1204,98,160,139,231,88,63,67,77,93,76,91,160,	0,19920,20675,21001,31341,31869,36492,39240,49210,60107,62191,62807,116633,
#Partially deleted in new
chr9	96502611	96567254	chr9:96502611-96567254	3	-	96503752	96566816	0	14	1178,117,98,160,139,231,88,63,67,77,93,76,91,487,	0,7061,19894,20649,20975,31315,31843,36466,39214,49184,60081,62165,62781,64156,
#Partially deleted in new
chr9	96503564	96619400	chr9:96503564-96619400	1	-	96515677	96619378	0	14	225,144,98,160,139,231,88,63,67,77,93,76,91,182,	0,12084,18941,19696,20022,30362,30890,35513,38261,48231,59128,61212,61828,115654,
#Partially deleted in new
chr9	96514502	96522603	chr9:96514502-96522603	0	-	96514502	96514502	8553170	3	447,144,98,	0,1146,8003,
#Partially deleted in new
chr9	96534000	96566830	chr9:96534000-96566830	0	-	96534000	96566830	789624	9	157,88,63,67,77,93,76,120,63,	0,454,5077,7825,17795,28692,30776,31392,32767,
#Partially deleted in new
chr9	96534140	96618606	chr9:96534140-96618606	0	-	96534140	96618606	789624	9	17,88,63,67,77,93,76,91,112,	0,314,4937,7685,17655,28552,30636,31252,84354,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	96538626	96564836	chr9:96538626-96564836	0	-	96538626	96538626	8553170	6	99,63,67,77,93,60,	0,451,3199,13169,24066,26150,
#Partially deleted in new
chr9	96538974	96619297	chr9:96538974-96619297	0	-	96538974	96538974	8553170	7	166,67,77,93,76,91,79,	0,2851,12821,23718,25802,26418,80244,
#Partially deleted in new
chr9	96551800	96618743	chr9:96551800-96618743	0	-	96551800	96551800	8553170	5	72,93,76,63,249,	0,10892,12976,13592,66694,
#Partially deleted in new
chr9	96562547	96565428	chr9:96562547-96565428	0	-	96562547	96562547	8553170	3	238,76,36,	0,2229,2845,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	96639576	96655281	chr9:96639576-96655281	3	-	96641758	96655281	789624	6	2310,132,106,54,69,192,	0,6316,11813,12082,15128,15513,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	96639576	96654748	chr9:96639576-96654748	0	-	96641758	96654748	789624	4	2310,106,54,44,	0,11813,12082,15128,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	96639576	96655303	chr9:96639576-96655303	0	-	96641758	96655303	789624	6	2310,132,106,54,69,52,	0,6316,11813,12082,15128,15675,
#Partially deleted in new
chr9	96645989	96654972	chr9:96645989-96654972	0	-	96645989	96645989	8553170	4	35,106,54,268,	0,5400,5669,8715,
#Partially deleted in new
chr9	96687055	96721121	chr9:96687055-96721121	3	+	96687055	96687055	8553170	2	269,156,	0,33910,
#Partially deleted in new
chr9	96725889	96727243	chr9:96725889-96727243	7	+	96725889	96725889	16724991	2	361,901,	0,453,
#Partially deleted in new
chr9	96726729	96727469	chr9:96726729-96727469	5	+	96726729	96726729	16724991	1	740,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	96755864	96778046	chr9:96755864-96778046	1	-	96758777	96776069	789624	6	4613,96,127,59,246,13,	0,7253,7641,18923,20135,22169,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	96755864	96778056	chr9:96755864-96778056	3	-	96758777	96776069	789624	6	4613,96,127,59,246,475,	0,7253,7641,18923,20135,21717,
#Deleted in new
chr9	96762946	96763693	chr9:96762946-96763693	0	-	96762946	96762946	8553170	2	267,188,	0,559,
#Partially deleted in new
chr9	96763066	96778129	chr9:96763066-96778129	0	-	96763066	96776069	789624	5	147,127,59,246,96,	0,439,11721,12933,14967,
#Partially deleted in new
chr9	96816471	96854488	chr9:96816471-96854488	3	-	96817922	96851961	789624	6	3307,102,127,59,217,401,	0,10608,28418,35475,36381,37616,
#Partially deleted in new
chr9	96816990	96853072	chr9:96816990-96853072	1	-	96817922	96851961	789624	5	2788,102,127,59,220,	0,10089,27899,34956,35862,
#Partially deleted in new
chr9	96817632	96875574	chr9:96817632-96875574	0	-	96817922	96875574	789624	3	2146,102,107,	0,9447,57835,
#Partially deleted in new
chr9	96819407	96854183	chr9:96819407-96854183	0	-	96819407	96819407	8553170	4	371,102,59,96,	0,7672,32539,34680,
#Partially deleted in new
chr9	96819407	96854360	chr9:96819407-96854360	0	-	96819407	96851961	789624	5	371,102,127,59,273,	0,7672,25482,32539,34680,
#Partially deleted in new
chr9	96844920	96854277	chr9:96844920-96854277	0	-	96844920	96844920	8553170	4	96,59,217,190,	0,7026,7932,9167,
#Deleted in new
chr9	96852982	96854360	chr9:96852982-96854360	0	-	96852982	96852982	8553170	2	32,273,	0,1105,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	96887372	97013675	chr9:96887372-97013675	0	-	96918825	97013366	789624	7	8665,193,184,128,63,96,417,	0,10562,31270,62182,71462,85480,125886,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	96897916	96942730	chr9:96897916-96942730	0	-	96897916	96897916	8553170	5	211,192,184,121,128,	0,5000,20726,35878,44686,
#Partially deleted in new
chr9	96898065	96949585	chr9:96898065-96949585	0	-	96898065	96898065	8553170	5	62,184,121,150,31,	0,20577,35729,44537,51489,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	96902983	97013637	chr9:96902983-97013637	0	-	96942691	97013366	789624	8	125,184,121,150,128,63,96,379,	0,15659,30811,39619,46571,55851,69869,110275,
#Partially deleted in new
chr9	96910075	96910405	chr9:96910075-96910405	7	+	96910075	96910075	16724991	1	330,	0,
#Partially deleted in new
chr9	96918687	96972941	chr9:96918687-96972941	0	-	96918687	96918687	8553170	4	139,128,63,89,	0,30867,40147,54165,
#Partially deleted in new
chr9	96918927	96919318	chr9:96918927-96919318	7	+	96918927	96918927	16724991	1	391,	0,
#Partially deleted in new
chr9	96928309	96940253	chr9:96928309-96940253	3	+	96929024	96939596	789624	7	731,697,129,140,341,117,696,	0,3412,7018,8115,8754,9575,11248,
#Partially deleted in new
chr9	96929003	96939418	chr9:96929003-96939418	1	+	96929024	96939149	789624	7	37,697,129,140,341,117,1055,	0,2718,6324,7421,8060,8881,9360,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	96933521	96972949	chr9:96933521-96972949	0	-	96933521	96933521	8553170	5	394,150,128,63,97,	0,9081,16033,25313,39331,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	96942912	97013600	chr9:96942912-97013600	1	-	96944045	97013366	789624	5	1173,128,63,96,342,	0,6642,15922,29940,70346,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	96946044	97013580	chr9:96946044-97013580	3	-	96946163	97013366	789624	5	177,128,63,96,322,	0,3510,12790,26808,67214,
#Partially deleted in new
chr9	96949295	97013708	chr9:96949295-97013708	0	-	96949295	96949295	8553170	3	387,63,450,	0,9539,63963,
#Partially deleted in new
chr9	96954819	96955461	chr9:96954819-96955461	7	+	96954819	96954819	16724991	1	642,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	97029678	97039643	chr9:97029678-97039643	3	-	97032948	97038043	0	8	3370,118,166,225,147,123,136,37,	0,5047,5849,6844,7573,7814,8239,9928,
#Partially deleted in new
chr9	97032657	97039310	chr9:97032657-97039310	1	-	97032948	97038043	0	8	391,118,166,225,147,123,136,240,	0,2068,2870,3865,4594,4835,5260,6413,
#Deleted in new
chr9	97037290	97039142	chr9:97037290-97039142	0	-	97037290	97037290	8553170	5	108,123,136,138,72,	0,202,627,1120,1780,
#Deleted in new
chr9	97067748	97068628	chr9:97067748-97068628	7	+	97067748	97067748	16724991	1	880,	0,
#Deleted in new
chr9	97076245	97077601	chr9:97076245-97077601	5	-	97076245	97076245	16724991	1	1356,	0,
#Deleted in new
chr9	97093693	97094638	chr9:97093693-97094638	7	-	97093693	97093693	16724991	1	945,	0,
#Deleted in new
chr9	97121658	97122489	chr9:97121658-97122489	7	+	97121658	97121658	16724991	1	831,	0,
#Deleted in new
chr9	97151893	97152694	chr9:97151893-97152694	7	-	97151893	97151893	16724991	1	801,	0,
#Partially deleted in new
chr9	97156569	97221235	chr9:97156569-97221235	7	-	97156569	97156569	16724991	16	16,221,212,282,130,113,150,920,74,54,68,138,107,174,115,206,	0,3612,5185,5995,14037,16378,21694,23427,28872,30884,35161,38133,43889,48291,54803,64460,
#Deleted in new
chr9	97192922	97193025	chr9:97192922-97193025	3	-	97192922	97192922	8553170	1	103,	0,
#Deleted in new
chr9	97195350	97197687	chr9:97195350-97197687	3	-	97195350	97195350	8553170	3	240,66,168,	0,1178,2169,
#Deleted in new
chr9	97198302	97199511	chr9:97198302-97199511	7	-	97198302	97198302	16724991	1	1209,	0,
#Partially deleted in new
chr9	97200474	97238700	chr9:97200474-97238700	3	-	97200474	97200474	8553170	3	91,115,278,	0,10898,37948,
#Partially deleted in new
chr9	97233200	97235014	chr9:97233200-97235014	3	+	97233200	97233200	8553170	2	151,130,	0,1684,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	97237763	97238678	chr9:97237763-97238678	1	-	97237763	97237763	8553170	2	322,256,	0,659,
#Partially deleted in new
chr9	97238448	97291993	chr9:97238448-97291993	0	+	97238448	97238448	8553170	12	119,91,52,17,129,71,112,154,76,82,49,623,	0,7647,12343,13092,38120,39107,40913,43067,49211,52135,52405,52922,
#Partially deleted in new
chr9	97238482	97297314	chr9:97238482-97297314	3	+	97238482	97238482	789624	16	85,91,52,17,129,71,112,154,76,82,49,117,120,164,147,1695,	0,7613,12309,13058,38086,39073,40879,43033,49177,52101,52371,52888,54073,55464,56362,57137,
#Partially deleted in new
chr9	97238496	97377287	chr9:97238496-97377287	0	+	97238496	97238496	789624	49	71,91,52,17,129,71,112,154,76,82,49,117,164,147,71,150,191,89,110,129,111,96,164,120,80,89,123,174,116,127,40,446,224,145,117,99,120,173,56,79,111,67,142,161,138,112,106,136,525,	0,7599,12295,13044,38072,39059,40865,43019,49163,52087,52357,52874,55450,56348,69239,69486,70917,73616,74739,75896,76121,76354,78568,79966,81629,84336,85284,86522,88057,89523,91657,91825,104843,116072,116395,119130,121485,123229,123699,123866,125521,127176,128062,131425,132144,133098,136046,136957,138266,
#Partially deleted in new
chr9	97238644	97246184	chr9:97238644-97246184	7	+	97238644	97238644	16724991	2	37,97,	0,7443,
#Partially deleted in new
chr9	97250828	97377098	chr9:97250828-97377098	0	+	97250828	97250828	789624	43	15,17,129,71,112,154,76,82,49,117,71,150,191,89,110,111,96,164,120,80,89,123,174,116,127,40,446,224,145,117,99,120,173,56,79,67,142,161,138,112,106,136,336,	0,712,25740,26727,28533,30687,36831,39755,40025,40542,56907,57154,58585,61284,62407,63789,64022,66236,67634,69297,72004,72952,74190,75725,77191,79325,79493,92511,103740,104063,106798,109153,110897,111367,111534,114844,115730,119093,119812,120766,123714,124625,125934,
#Partially deleted in new
chr9	97250828	97377098	chr9:97250828-97377098	3	+	97250828	97250828	789624	49	15,17,129,71,112,154,76,82,49,117,164,147,71,150,191,89,110,129,111,96,164,120,80,89,123,174,116,127,40,446,224,176,181,147,145,117,99,120,173,246,78,67,142,161,138,112,106,136,336,	0,712,25740,26727,28533,30687,36831,39755,40025,40542,43118,44016,56907,57154,58585,61284,62407,63564,63789,64022,66236,67634,69297,72004,72952,74190,75725,77191,79325,79493,92511,96485,98282,99580,103740,104063,106798,109153,110897,111367,113222,114844,115730,119093,119812,120766,123714,124625,125934,
#Partially deleted in new
chr9	97276565	97295759	chr9:97276565-97295759	7	+	97276565	97276565	16724991	12	132,69,111,153,72,81,48,114,117,162,144,138,	0,990,2797,4950,11096,14019,14288,14807,15991,17382,18281,19056,
#Partially deleted in new
chr9	97290591	97376933	chr9:97290591-97376933	0	+	97290591	97290591	8553170	41	74,49,117,164,147,71,150,191,89,110,129,111,96,164,80,89,158,174,116,40,446,224,353,201,147,145,117,99,116,173,56,79,78,67,142,161,138,112,106,136,171,	0,262,779,3355,4253,17144,17391,18822,21521,22644,23801,24026,24259,26473,29534,32241,33189,34427,35962,39562,39730,52748,56722,58499,59817,63977,64300,67035,69394,71134,71604,71771,73459,75081,75967,79330,80049,81003,83951,84862,86171,
#Deleted in new
chr9	97307303	97309493	chr9:97307303-97309493	0	+	97307303	97307303	8553170	3	68,397,80,	0,432,2110,
#Partially deleted in new
chr9	97307320	97343643	chr9:97307320-97343643	0	+	97307320	97307320	8553170	20	51,71,150,191,89,110,129,111,96,164,120,80,89,123,174,116,127,40,446,304,	0,415,662,2093,4792,5915,7072,7297,7530,9744,11142,12805,15512,16460,17698,19233,20699,22833,23001,36019,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr9	97307360	97345813	chr9:97307360-97345813	0	+	97307360	97307360	8553170	21	191,71,150,191,89,101,129,111,96,164,120,80,89,123,174,116,127,40,446,224,208,	0,375,622,2053,4752,5875,7032,7257,7490,9704,11102,12765,15472,16420,17658,19193,20659,22793,22961,35979,38245,
#Partially deleted in new
chr9	97307658	97376933	chr9:97307658-97376933	3	+	97307755	97376894	789624	37	148,150,191,89,110,129,111,96,164,120,80,89,123,174,116,127,40,446,224,176,181,147,145,117,99,120,173,246,78,67,142,161,138,112,106,136,171,	0,324,1755,4454,5577,6734,6959,7192,9406,10804,12467,15174,16122,17360,18895,20361,22495,22663,35681,39655,41452,42750,46910,47233,49968,52323,54067,54537,56392,58014,58900,62263,62982,63936,66884,67795,69104,
#Partially deleted in new
chr9	97330397	97350503	chr9:97330397-97350503	0	+	97330397	97330397	8553170	3	370,224,95,	0,12942,20011,
#Partially deleted in new
chr9	97330532	97350554	chr9:97330532-97350554	0	+	97330532	97330532	8553170	3	235,181,146,	0,18578,19876,
#Partially deleted in new
chr9	97354616	97358026	chr9:97354616-97358026	0	+	97354616	97354616	8553170	3	97,117,400,	0,275,3010,
#Partially deleted in new
chr9	97362294	97364659	chr9:97362294-97364659	0	+	97362294	97362294	8553170	3	147,93,239,	0,1887,2126,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	97365164	97369944	chr9:97365164-97369944	0	+	97365164	97365164	8553170	3	575,142,23,	0,1394,4757,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	97369277	97378524	chr9:97369277-97378524	0	+	97369277	97369277	8553170	3	805,4008,3071,	0,1363,6176,
#Partially deleted in new
chr9	97370012	97371975	chr9:97370012-97371975	0	+	97370012	97370012	8553170	3	70,138,381,	0,628,1582,
#Partially deleted in new
chr9	97371339	97376818	chr9:97371339-97376818	0	+	97371339	97371339	8553170	4	367,106,136,56,	0,3203,4114,5423,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	97371871	97376933	chr9:97371871-97376933	0	+	97371871	97371871	8553170	3	2777,136,171,	0,3582,4891,
#Partially deleted in new
chr9	97386239	97396112	chr9:97386239-97396112	7	-	97386239	97386239	16724991	11	69,57,48,51,54,57,33,48,93,205,106,	0,280,1382,1955,2816,4910,5586,5757,6408,7091,9767,
#Partially deleted in new
chr9	97411949	97496125	chr9:97411949-97496125	3	+	97428465	97495883	0	17	289,213,142,214,74,218,587,187,112,203,135,87,135,111,503,161,463,	0,16510,18983,20075,27295,29708,48228,52892,58608,60343,61542,63433,66489,68878,70899,75222,83713,
#Deleted in new
chr9	97480341	97482946	chr9:97480341-97482946	0	+	97480341	97480341	8553170	2	597,98,	0,2507,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	97501179	97601741	chr9:97501179-97601741	3	+	97524188	97599698	0	10	88,168,157,120,90,131,108,144,145,2108,	0,22961,45005,52101,61552,62858,64668,67714,90111,98454,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	97501638	97601748	chr9:97501638-97601748	1	+	97524188	97599698	0	10	165,168,157,120,90,131,108,144,145,2115,	0,22502,44546,51642,61093,62399,64209,67255,89652,97995,
#Partially deleted in new
chr9	97512705	97516706	chr9:97512705-97516706	3	-	97512705	97512705	8553170	3	511,197,494,	0,987,3507,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	97513143	97517836	chr9:97513143-97517836	0	-	97513143	97513143	8553170	5	73,197,147,170,94,	0,549,3069,3505,4599,
#Partially deleted in new
chr9	97555434	97601254	chr9:97555434-97601254	1	+	97555695	97599698	0	7	277,90,131,108,144,145,1621,	0,7297,8603,10413,13459,35856,44199,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	97600079	97603155	chr9:97600079-97603155	0	-	97600079	97600079	8553170	1	3076,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	97600082	97633575	chr9:97600082-97633575	3	-	97602468	97627562	789624	10	2685,139,159,119,106,126,121,317,215,333,	0,4644,5400,6060,10263,11491,17674,25598,27315,33160,
#Partially deleted in new
chr9	97602717	97633301	chr9:97602717-97633301	0	-	97627382	97627562	789624	10	50,139,159,119,106,126,121,317,307,59,	0,2009,2765,3425,7628,8856,15039,22963,24588,30525,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	97604068	97627404	chr9:97604068-97627404	0	-	97627382	97627404	789624	6	797,159,119,121,317,99,	0,1414,2074,13688,21612,23237,
#Partially deleted in new
chr9	97610209	97625775	chr9:97610209-97625775	0	-	97610209	97610209	8553170	4	242,126,121,95,	0,1364,7547,15471,
#Partially deleted in new
chr9	97610844	97617852	chr9:97610844-97617852	0	-	97610844	97610844	8553170	3	278,126,96,	0,729,6912,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chr9	97633625	97673748	chr9:97633625-97673748	3	+	97633881	97671199	0	23	290,89,101,157,108,122,70,216,98,64,111,65,63,75,104,123,103,94,104,115,129,114,2663,	0,7168,7936,9578,11491,11985,13866,14382,16877,17684,20172,21254,22076,22385,25014,27320,28416,29328,30714,33137,35220,35967,37460,
#Partially deleted in new
chr9	97633667	97650562	chr9:97633667-97650562	0	+	97633881	97645141	789624	7	248,89,101,108,70,216,60,	0,7126,7894,11449,13824,14340,16835,
#Partially deleted in new
chr9	97633881	97645141	chr9:97633881-97645141	1	+	97633881	97645141	789624	4	34,89,101,25,	0,6912,7680,11235,
#Partially deleted in new
chr9	97634514	97636051	chr9:97634514-97636051	3	-	97634514	97634514	8553170	3	117,79,89,	0,1273,1448,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	97666762	97670076	chr9:97666762-97670076	0	+	97666762	97669814	789624	3	115,129,484,	0,2083,2830,
#Partially deleted in new
chr9	97674908	97697357	chr9:97674908-97697357	3	-	97675438	97697292	0	6	679,118,166,106,111,237,	0,10014,12187,14625,18740,22212,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	97674908	97697293	chr9:97674908-97697293	0	-	97682308	97697292	789624	7	679,231,118,166,106,111,173,	0,7291,10014,12187,14625,18740,22212,
#Deleted in new
chr9	97675066	97675955	chr9:97675066-97675955	0	-	97675066	97675066	8553170	2	521,185,	0,704,
#Partially deleted in new
chr9	97684960	97697295	chr9:97684960-97697295	0	-	97684960	97684960	8553170	4	80,166,111,72,	0,2135,8688,12263,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	97698921	97700734	chr9:97698921-97700734	7	+	97698921	97698921	16724991	2	662,628,	0,1185,
#Partially deleted in new
chr9	97722799	97810039	chr9:97722799-97810039	0	-	97722799	97722799	8553170	3	135,185,145,	0,83040,87095,
#Partially deleted in new
chr9	97722799	97853080	chr9:97722799-97853080	0	-	97722799	97722799	8553170	3	135,145,165,	0,87095,130116,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	97743207	97744935	chr9:97743207-97744935	3	+	97743207	97743207	8553170	1	1728,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	97853253	97856715	chr9:97853253-97856715	3	+	97853914	97855036	789624	1	3462,	0,
#Partially deleted in new
chr9	97904488	97922570	chr9:97904488-97922570	3	-	97904732	97922493	789624	5	504,657,158,175,153,	0,5471,8912,11675,17929,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	97904533	97912471	chr9:97904533-97912471	0	-	97904732	97910587	789624	2	459,2512,	0,5426,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	97904551	97922516	chr9:97904551-97922516	1	-	97910157	97911017	789624	8	441,207,449,2058,158,48,175,99,	0,5408,5616,6366,8849,9427,11612,17866,
#Partially deleted in new
chr9	97909988	97922472	chr9:97909988-97922472	0	-	97909988	97909988	8553170	3	628,158,55,	0,3412,12429,
#Partially deleted in new
chr9	97910282	97922490	chr9:97910282-97922490	0	-	97912901	97922490	789624	5	334,103,158,175,73,	0,2590,3118,5881,12135,
#Partially deleted in new
chr9	97910502	97922468	chr9:97910502-97922468	0	-	97910502	97910502	8553170	4	114,103,158,51,	0,2370,2898,11915,
#Partially deleted in new
chr9	97913251	97922487	chr9:97913251-97922487	0	-	97913284	97922487	789624	3	307,175,70,	0,2912,9166,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	97915689	97915796	chr9:97915689-97915796	3	+	97915689	97915689	8553170	1	107,	0,
#Partially deleted in new
chr9	97926790	97944856	chr9:97926790-97944856	3	-	97927383	97938136	789624	5	688,1187,94,134,89,	0,3244,9380,11267,17977,
#Partially deleted in new
chr9	97926790	97938393	chr9:97926790-97938393	1	-	97927383	97938136	789624	4	688,1187,94,336,	0,3244,9380,11267,
#Partially deleted in new
chr9	97983360	98015943	chr9:97983360-98015943	3	+	97983555	98015431	0	7	249,150,123,190,119,52,580,	0,11270,15195,21603,27910,29060,32003,
#Deleted in new
chr9	97986550	97987656	chr9:97986550-97987656	3	-	97986550	97986550	8553170	2	265,137,	0,969,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	97998613	98005298	chr9:97998613-98005298	0	+	97998613	97998613	8553170	2	65,335,	0,6350,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	98032229	98032335	chr9:98032229-98032335	3	+	98032229	98032229	8553170	1	106,	0,
#Partially deleted in new
chr9	98056738	98083075	chr9:98056738-98083075	3	+	98056808	98083055	0	6	202,216,100,155,267,230,	0,4043,20179,21454,24077,26107,
#Partially deleted in new
chr9	98056767	98078304	chr9:98056767-98078304	0	+	98056767	98056767	8553170	5	173,216,163,100,112,	0,4014,18802,20150,21425,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	98056769	98061259	chr9:98056769-98061259	0	+	98056769	98056769	8553170	2	171,478,	0,4012,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	98069274	98119210	chr9:98069274-98119210	3	-	98087469	98119188	789624	7	413,564,93,163,234,96,229,	0,18167,22634,25592,30656,40614,49707,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	98074642	98083075	chr9:98074642-98083075	0	+	98074642	98074642	8553170	4	2375,155,267,230,	0,3550,6173,8203,
#Partially deleted in new
chr9	98076828	98081055	chr9:98076828-98081055	0	+	98078167	98081055	789624	3	189,286,240,	0,1233,3987,
#Partially deleted in new
chr9	98078320	98082166	chr9:98078320-98082166	0	+	98078320	98081136	789624	2	27,1351,	0,2495,
#Partially deleted in new
chr9	98080839	98088001	chr9:98080839-98088001	0	-	98080839	98080839	8553170	2	422,560,	0,6602,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	98084354	98119198	chr9:98084354-98119198	1	-	98087469	98119188	789624	6	3651,93,163,234,96,217,	0,7554,10512,15576,25534,34627,
#Partially deleted in new
chr9	98084354	98119198	chr9:98084354-98119198	1	-	98087469	98119188	789624	7	112,564,93,163,234,96,217,	0,3087,7554,10512,15576,25534,34627,
#Partially deleted in new
chr9	98087899	98119212	chr9:98087899-98119212	0	-	98094949	98119188	789624	5	106,93,163,46,231,	0,4009,6967,12031,31082,
#Partially deleted in new
chr9	98094866	98119136	chr9:98094866-98119136	0	-	98094866	98094866	8553170	5	163,234,96,166,155,	0,5064,15022,15202,24115,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	98115884	98116135	chr9:98115884-98116135	3	+	98115884	98115884	8553170	1	251,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	98120974	98172884	chr9:98120974-98172884	1	-	98124773	98157660	789624	12	3931,275,91,113,97,105,117,180,150,117,201,258,	0,5574,7195,7632,8819,9980,11210,12063,13831,16597,36485,51652,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	98120974	98192640	chr9:98120974-98192640	3	-	98124773	98157660	789624	12	3931,275,91,113,97,105,117,180,150,117,201,82,	0,5574,7195,7632,8819,9980,11210,12063,13831,16597,36485,71584,
#Partially deleted in new
chr9	98198998	98255721	chr9:98198998-98255721	3	-	98199380	98255541	0	13	590,122,186,121,477,188,111,396,197,134,136,142,549,	0,1254,2480,4289,9669,11657,14109,21834,29953,34417,44995,52786,56174,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	98199025	98213550	chr9:98199025-98213550	1	-	98199380	98213212	0	7	563,122,186,121,477,188,443,	0,1227,2453,4262,9642,11630,14082,
#Partially deleted in new
chr9	98199028	98255590	chr9:98199028-98255590	1	-	98199380	98233542	0	12	560,122,186,121,477,188,111,396,197,134,136,418,	0,1224,2450,4259,9639,11627,14079,21804,29923,34387,44965,56144,
#Partially deleted in new
chr9	98199028	98255580	chr9:98199028-98255580	1	-	98199580	98255541	0	13	556,122,186,121,477,188,111,396,197,134,136,142,408,	0,1224,2450,4259,9639,11627,14079,21804,29923,34387,44965,52756,56144,
#Partially deleted in new
chr9	98199028	98255633	chr9:98199028-98255633	1	-	98199380	98255541	0	13	560,89,186,121,477,188,111,396,197,134,136,142,461,	0,1224,2450,4259,9639,11627,14079,21804,29923,34387,44965,52756,56144,
#Partially deleted in new
chr9	98208674	98229083	chr9:98208674-98229083	0	-	98208674	98208674	8553170	4	470,83,135,132,	0,1981,12419,20277,
#Deleted in new
chr9	98229148	98229217	chr9:98229148-98229217	3	-	98229148	98229148	5263520	1	69,	0,
#Partially deleted in new
chr9	98234708	98235567	chr9:98234708-98235567	7	+	98234708	98234708	16724991	2	206,349,	0,510,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr9	98288081	98709197	chr9:98288081-98709197	3	-	98290583	98708737	0	19	2668,118,130,183,225,111,123,108,133,151,81,61,237,201,66,102,171,138,781,	0,5703,11142,15159,18039,23013,74633,83382,97558,100772,106093,117999,165899,185064,192850,208331,253791,289853,420335,
#Partially deleted in new
chr9	98290646	98581179	chr9:98290646-98581179	0	-	98290646	98290646	8553170	19	103,118,130,183,225,111,123,108,133,151,81,61,237,201,66,102,171,138,99,	0,3138,8577,12594,15474,20448,72068,80817,94993,98207,103528,115434,163334,182499,190285,205766,251226,287288,290434,
#Deleted in new
chr9	98302842	98303334	chr9:98302842-98303334	0	-	98302842	98302842	8553170	2	54,94,	0,398,
#Partially deleted in new
chr9	98303329	98371571	chr9:98303329-98371571	0	-	98303329	98371571	789624	4	94,225,123,108,	0,2791,59385,68134,
#Partially deleted in new
chr9	98304177	98306571	chr9:98304177-98306571	0	-	98304177	98304177	8553170	2	112,451,	0,1943,
#Partially deleted in new
chr9	98306213	98375307	chr9:98306213-98375307	0	-	98306213	98306213	8553170	5	132,111,123,108,157,	0,4881,56501,65250,68937,
#Partially deleted in new
chr9	98362554	98388887	chr9:98362554-98388887	0	-	98362554	98362554	8553170	4	283,108,133,34,	0,8909,23085,26299,
#Partially deleted in new
chr9	98454163	98516299	chr9:98454163-98516299	0	-	98454163	98454163	8553170	6	54,201,66,102,102,306,	0,18982,26768,41802,42249,61830,
#Partially deleted in new
chr9	98473229	98555898	chr9:98473229-98555898	0	-	98473229	98473229	8553170	5	117,66,102,171,246,	0,7702,23183,68643,82423,
#Partially deleted in new
chr9	98473335	98607650	chr9:98473335-98607650	0	-	98473335	98473335	8553170	6	11,66,102,171,138,95,	0,7596,23077,68537,104599,134220,
#Partially deleted in new
chr9	98541886	98707461	chr9:98541886-98707461	0	-	98541886	98578009	789624	3	157,138,218,	0,36048,165357,
#Partially deleted in new
chr9	98542012	98552118	chr9:98542012-98552118	0	-	98542012	98542012	8553170	2	31,69,	0,10037,
#Deleted in new
chr9	98606832	98608133	chr9:98606832-98608133	7	+	98606832	98606832	16724991	1	1301,	0,
#Partially deleted in new
chr9	98731328	98777426	chr9:98731328-98777426	0	-	98736518	98777426	789624	9	1225,128,117,68,187,170,151,204,22,	0,5167,14230,19700,25091,36752,39567,42548,46076,
#Partially deleted in new
chr9	98731995	98796965	chr9:98731995-98796965	1	-	98732503	98784835	789624	15	558,97,117,68,184,170,151,204,50,199,149,107,205,45,282,	0,4531,13563,19033,24424,36085,38900,41881,45409,46230,48193,50471,51957,52836,64688,
#Partially deleted in new
chr9	98732012	98795996	chr9:98732012-98795996	0	-	98732012	98732012	8553170	15	541,97,117,35,68,184,170,151,204,50,199,149,107,205,7,	0,4514,13546,14047,19016,24407,36068,38883,41864,45392,46213,48176,50454,51940,63977,
#Partially deleted in new
chr9	98732018	98796539	chr9:98732018-98796539	3	-	98736518	98796491	0	15	4605,117,68,184,170,151,204,50,199,149,107,205,45,503,407,	0,13540,19010,24401,36062,38877,41858,45386,46207,48170,50448,51934,52813,58085,64114,
#Deleted in new
chr9	98783569	98784468	chr9:98783569-98784468	0	-	98783569	98783569	8553170	2	588,89,	0,810,
#Partially deleted in new
chr9	98783949	98790496	chr9:98783949-98790496	0	-	98783949	98783949	8553170	3	208,45,393,	0,882,6154,
#Partially deleted in new
chr9	98789910	98796539	chr9:98789910-98796539	0	-	98789910	98789910	8553170	2	696,407,	0,6222,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	98798465	98807564	chr9:98798465-98807564	3	-	98798465	98798465	8553170	2	1144,794,	0,8305,
#Partially deleted in new
chr9	98807698	98850081	chr9:98807698-98850081	3	+	98807698	98849092	789624	10	371,170,190,186,118,177,132,114,147,1130,	0,15557,19053,24073,27550,29273,32303,36397,38278,41253,
#Partially deleted in new
chr9	98808002	98835355	chr9:98808002-98835355	0	+	98808002	98826779	789624	4	67,190,186,107,	0,18749,23769,27246,
#Partially deleted in new
chr9	98837074	98844522	chr9:98837074-98844522	0	+	98837074	98837074	8553170	3	74,132,427,	0,2927,7021,
#Partially deleted in new
chr9	98847171	98872257	chr9:98847171-98872257	0	-	98847171	98847171	8553170	4	320,168,72,69,	0,19513,19867,25017,
#Partially deleted in new
chr9	98847228	98872278	chr9:98847228-98872278	1	-	98847228	98847228	8553170	2	263,90,	0,24960,
#Partially deleted in new
chr9	98847230	98872403	chr9:98847230-98872403	1	-	98847230	98847230	8553170	3	261,214,215,	0,1697,24958,
#Partially deleted in new
chr9	98847392	98849613	chr9:98847392-98849613	0	-	98847392	98847392	8553170	2	99,686,	0,1535,
#Deleted in new
chr9	98848771	98849634	chr9:98848771-98849634	0	+	98848771	98848771	8553170	2	89,683,	0,180,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	98859571	98872263	chr9:98859571-98872263	0	-	98859571	98859571	8553170	2	583,75,	0,12617,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	98862238	98872263	chr9:98862238-98872263	2	-	98862238	98862238	8553170	5	274,168,72,100,75,	0,4446,4800,7726,9950,
#Partially deleted in new
chr9	98864443	98872263	chr9:98864443-98872263	0	-	98864443	98864443	8553170	2	377,75,	0,7745,
#Partially deleted in new
chr9	98868990	98872263	chr9:98868990-98872263	0	-	98868990	98868990	8553170	2	523,75,	0,3198,
#Partially deleted in new
chr9	98868990	98872415	chr9:98868990-98872415	1	-	98868990	98868990	8553170	2	427,227,	0,3198,
#Partially deleted in new
chr9	98868990	98872263	chr9:98868990-98872263	0	-	98868990	98868990	8553170	3	467,182,75,	0,1812,3198,
#Partially deleted in new
chr9	98868990	98872263	chr9:98868990-98872263	0	-	98868990	98868990	8553170	3	467,94,75,	0,1900,3198,
#Partially deleted in new
chr9	98868994	98872415	chr9:98868994-98872415	1	-	98868994	98868994	8553170	2	463,227,	0,3194,
#Partially deleted in new
chr9	98869001	98872415	chr9:98869001-98872415	1	-	98869001	98869001	8553170	2	489,227,	0,3187,
#Partially deleted in new
chr9	98869061	98872263	chr9:98869061-98872263	0	-	98869061	98869061	8553170	2	622,75,	0,3127,
#Partially deleted in new
chr9	98869066	98872263	chr9:98869066-98872263	0	-	98869066	98869066	8553170	3	391,339,75,	0,1366,3122,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	98869114	98872263	chr9:98869114-98872263	0	-	98869114	98869114	8553170	4	376,97,100,201,	0,472,850,2948,
#Partially deleted in new
chr9	98869164	98872263	chr9:98869164-98872263	0	-	98869164	98869164	8553170	3	326,97,306,	0,422,2793,
#Partially deleted in new
chr9	98869240	98872263	chr9:98869240-98872263	0	-	98869240	98869240	8553170	4	250,339,94,75,	0,1192,1650,2948,
#Partially deleted in new
chr9	98869336	98872260	chr9:98869336-98872260	0	-	98869336	98869336	8553170	5	121,97,339,37,72,	0,250,1096,2023,2852,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	98869381	98872262	chr9:98869381-98872262	0	-	98869381	98869381	8553170	5	109,97,84,339,74,	0,205,599,1051,2807,
#Deleted in new
chr9	98870113	98872415	chr9:98870113-98872415	1	-	98870113	98870113	8553170	2	658,227,	0,2075,
#Deleted in new
chr9	98870348	98872263	chr9:98870348-98872263	0	-	98870348	98870348	8553170	2	636,75,	0,1840,
#Partially deleted in new
chr9	98890589	98891937	chr9:98890589-98891937	7	+	98890589	98890589	16724991	2	257,61,	0,1287,
#Partially deleted in new
chr9	98943178	98944188	chr9:98943178-98944188	0	+	98943178	98943178	8553170	3	131,118,27,	0,776,983,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	98943336	98943775	chr9:98943336-98943775	3	-	98943336	98943336	8553170	1	439,	0,
#Partially deleted in new
chr9	98943638	99070792	chr9:98943638-99070792	3	+	98944061	99069886	0	42	434,89,548,75,81,148,113,135,153,150,144,54,60,93,126,63,36,141,69,36,84,66,36,63,69,36,54,60,69,42,46,81,50,111,145,65,129,60,60,186,116,1120,	0,523,41926,43655,45539,53295,57200,59814,61259,71778,72337,76750,78452,79718,81235,82265,90910,91375,91711,92531,92674,95029,96882,98406,100929,101096,104147,104302,106051,106215,108749,110937,111463,111623,112621,116250,118332,118606,119411,123243,124916,126034,
#Partially deleted in new
chr9	98943638	98986453	chr9:98943638-98986453	0	+	98943638	98943638	8553170	3	434,89,889,	0,523,41926,
#Partially deleted in new
chr9	98943712	99070792	chr9:98943712-99070792	1	+	98944192	99069886	789624	43	360,89,548,75,81,152,7,102,135,153,150,144,54,60,93,126,63,36,141,69,36,84,66,36,63,69,36,54,60,69,42,46,81,50,111,145,65,129,60,60,186,116,1120,	0,449,41852,43581,45465,53221,54140,57137,59740,61185,71704,72263,76676,78378,79644,81161,82191,90836,91301,91637,92457,92600,94955,96808,98332,100855,101022,104073,104228,105977,106141,108675,110863,111389,111549,112547,116176,118258,118532,119337,123169,124842,125960,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	99038672	99041377	chr9:99038672-99041377	0	+	99038672	99038672	8553170	3	61,36,674,	0,1848,2031,
#Partially deleted in new
chr9	99104037	99132726	chr9:99104037-99132726	0	+	99128964	99132726	789624	3	69,246,218,	0,24817,28471,
#Partially deleted in new
chr9	99104069	99132739	chr9:99104069-99132739	0	+	99128964	99132739	789624	3	37,246,243,	0,24785,28427,
#Partially deleted in new
chr9	99105088	99154192	chr9:99105088-99154192	3	+	99105205	99149305	0	9	214,246,231,231,168,157,125,131,5013,	0,23766,27420,32770,37447,39643,41396,42565,44091,
#Partially deleted in new
chr9	99105110	99153649	chr9:99105110-99153649	1	+	99105205	99149305	0	8	192,246,231,168,157,125,131,4470,	0,23744,32748,37425,39621,41374,42543,44069,
#Partially deleted in new
chr9	99105149	99149528	chr9:99105149-99149528	0	+	99105205	99147663	789624	8	153,246,243,231,168,157,131,349,	0,23705,27347,32709,37386,39582,42504,44030,
#Partially deleted in new
chr9	99105149	99153658	chr9:99105149-99153658	1	+	99105205	99149305	0	9	153,246,243,231,168,157,125,131,4479,	0,23705,27347,32709,37386,39582,41335,42504,44030,
#Partially deleted in new
chr9	99127774	99138064	chr9:99127774-99138064	0	+	99128964	99138064	789624	3	228,246,206,	0,1080,10084,
#Partially deleted in new
chr9	99127873	99132703	chr9:99127873-99132703	0	+	99128964	99132703	789624	3	129,246,207,	0,981,4623,
#Partially deleted in new
chr9	99127915	99149341	chr9:99127915-99149341	1	+	99128964	99149305	789624	9	87,246,231,231,168,157,125,131,162,	0,939,4593,9943,14620,16816,18569,19738,21264,
#Partially deleted in new
chr9	99127933	99132739	chr9:99127933-99132739	0	+	99128964	99132739	789624	3	69,265,231,	0,902,4575,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	99145839	99145966	chr9:99145839-99145966	7	-	99145839	99145839	16724991	1	127,	0,
#Deleted in new
chr9	99183372	99184891	chr9:99183372-99184891	3	+	99183372	99183372	8553170	2	141,298,	0,1221,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	99185586	99185866	chr9:99185586-99185866	3	-	99185586	99185586	8553170	1	280,	0,
#Partially deleted in new
chr9	99216425	99221942	chr9:99216425-99221942	0	-	99221068	99221894	789624	3	2411,159,396,	0,4553,5121,
#Partially deleted in new
chr9	99217366	99221956	chr9:99217366-99221956	3	-	99217933	99221894	789624	2	1470,410,	0,4180,
#Partially deleted in new
chr9	99217371	99221140	chr9:99217371-99221140	1	-	99217933	99221047	789624	2	1465,162,	0,3607,
#Partially deleted in new
chr9	99222063	99230615	chr9:99222063-99230615	1	+	99227959	99230424	789624	4	108,98,102,279,	0,482,5835,8273,
#Partially deleted in new
chr9	99222300	99230615	chr9:99222300-99230615	3	+	99222363	99230424	789624	4	66,98,102,279,	0,245,5598,8036,
#Deleted in new
chr9	99222314	99223180	chr9:99222314-99223180	0	+	99222314	99222314	8553170	2	52,635,	0,231,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	99284021	99284373	chr9:99284021-99284373	3	+	99284021	99284021	8553170	1	352,	0,
#Deleted in new
chr9	99305175	99306611	chr9:99305175-99306611	7	+	99305175	99305175	16724991	1	1436,	0,
#Deleted in new
chr9	99355336	99356264	chr9:99355336-99356264	0	-	99355336	99355336	8553170	1	928,	0,
#Partially deleted in new
chr9	99355336	99368914	chr9:99355336-99368914	1	-	99355336	99355336	8553170	3	266,148,95,	0,12324,13483,
#Partially deleted in new
chr9	99355343	99366472	chr9:99355343-99366472	0	-	99355343	99355343	8553170	3	259,125,74,	0,4041,11055,
#Partially deleted in new
chr9	99355409	99375227	chr9:99355409-99375227	3	-	99355409	99355409	789624	10	193,125,178,112,145,148,137,603,402,90,	0,3975,4290,4978,10989,12251,14322,15444,18596,19728,
#Deleted in new
chr9	99357826	99357957	chr9:99357826-99357957	3	+	99357826	99357826	8553170	1	131,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	99359673	99374053	chr9:99359673-99374053	1	-	99359673	99359673	8553170	7	204,110,197,137,603,194,48,	0,716,7938,10058,11180,13247,14332,
#Partially deleted in new
chr9	99366416	99372512	chr9:99366416-99372512	1	-	99366416	99366416	8553170	3	100,148,1500,	0,1244,4596,
#Deleted in new
chr9	99368446	99368566	chr9:99368446-99368566	3	+	99368446	99368446	8553170	1	120,	0,
#Partially deleted in new
chr9	99374353	99375784	chr9:99374353-99375784	0	-	99374353	99374353	8553170	2	54,647,	0,784,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	99374353	99377240	chr9:99374353-99377240	1	-	99374353	99374353	8553170	3	54,97,400,	0,2046,2487,
#Partially deleted in new
chr9	99531695	99536924	chr9:99531695-99536924	3	+	99531695	99531695	8553170	2	117,302,	0,4927,
#Partially deleted in new
chr9	99585785	99819889	chr9:99585785-99819889	3	-	99585785	99585785	789624	7	865,100,162,98,129,121,69,	0,1099,2639,10404,132373,220085,234035,
#Partially deleted in new
chr9	99821854	99834059	chr9:99821854-99834059	1	+	99828042	99833532	789624	5	553,174,953,130,778,	0,3804,6186,10834,11427,
#Partially deleted in new
chr9	99821854	99865051	chr9:99821854-99865051	1	+	99828042	99863867	789624	8	553,174,953,130,173,200,179,1432,	0,3804,6186,10834,11427,22794,25582,41765,
#Partially deleted in new
chr9	99821854	99866891	chr9:99821854-99866891	3	+	99826770	99863867	789624	9	553,174,72,953,130,173,200,179,3272,	0,3804,4875,6186,10834,11427,22794,25582,41765,
#Partially deleted in new
chr9	99826726	99866891	chr9:99826726-99866891	1	+	99826770	99863867	789624	7	75,953,130,173,200,179,3272,	0,1314,5962,6555,17922,20710,36893,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	99886321	99906601	chr9:99886321-99906601	3	-	99886321	99886321	789624	3	374,126,48,	0,8558,20232,
#Partially deleted in new
chr9	99906632	99970341	chr9:99906632-99970341	3	+	99915239	99968673	0	8	74,185,66,226,116,51,87,1908,	0,8545,22145,44427,53284,53472,61020,61801,
#Partially deleted in new
chr9	99906670	99968520	chr9:99906670-99968520	0	+	99915239	99916063	789624	8	36,185,120,66,226,51,87,87,	0,8507,9378,22107,44389,53434,60982,61763,
#Partially deleted in new
chr9	99906672	99929169	chr9:99906672-99929169	0	+	99906672	99906672	8553170	3	34,185,392,	0,8505,22105,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	99906676	99951184	chr9:99906676-99951184	0	+	99915239	99915362	789624	5	30,162,185,66,125,	0,7313,8501,22101,44383,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	99906677	99959953	chr9:99906677-99959953	0	+	99915239	99945736	789624	6	29,185,66,132,226,37,	0,8500,22100,39041,44382,53239,
#Partially deleted in new
chr9	99906695	99968748	chr9:99906695-99968748	0	+	99915239	99960115	789624	7	11,185,66,226,51,87,315,	0,8482,22082,44364,53409,60957,61738,
#Partially deleted in new
chr9	99906708	99969540	chr9:99906708-99969540	1	+	99915239	99968673	0	8	685,185,66,226,116,51,87,1107,	0,8469,22069,44351,53208,53396,60944,61725,
#Partially deleted in new
chr9	99906711	99969540	chr9:99906711-99969540	1	+	99915239	99968673	0	8	586,185,66,226,116,51,87,1107,	0,8466,22066,44348,53205,53393,60941,61722,
#Partially deleted in new
chr9	99906741	99915362	chr9:99906741-99915362	0	+	99915239	99915362	789624	2	357,185,	0,8436,
#Partially deleted in new
chr9	99915076	99929896	chr9:99915076-99929896	3	-	99915076	99915076	8553170	2	247,89,	0,14731,
#Partially deleted in new
chr9	99928777	99954043	chr9:99928777-99954043	0	+	99928777	99928777	8553170	3	66,226,50,	0,22282,25216,
#Partially deleted in new
chr9	99937907	99968612	chr9:99937907-99968612	0	+	99937907	99937907	8553170	6	169,226,116,51,87,179,	0,13152,22009,22197,29745,30526,
#Deleted in new
chr9	99967269	99968821	chr9:99967269-99968821	0	+	99967269	99967269	8553170	2	470,388,	0,1164,
#Partially deleted in new
chr9	99979178	100099040	chr9:99979178-100099040	3	-	99982611	100098840	0	12	3535,103,142,112,117,58,116,185,116,40,73,257,	0,5788,27327,28399,37143,39077,41437,42863,73238,78641,80921,119605,
#Partially deleted in new
chr9	99998300	99999069	chr9:99998300-99999069	7	-	99998300	99998300	16724991	1	769,	0,
#Partially deleted in new
chr9	100099255	100301000	chr9:100099255-100301000	3	+	100104521	100300674	789624	17	161,130,167,174,168,181,110,172,156,230,107,213,284,718,230,75,433,	0,5242,27127,126806,130404,140804,143314,147360,153027,153651,165566,173608,185064,193070,197661,198680,201312,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	100099260	100226234	chr9:100099260-100226234	0	+	100099260	100099260	8553170	5	156,130,167,88,173,	0,5237,27122,116140,126801,
#Deleted in new
chr9	100099271	100102017	chr9:100099271-100102017	0	+	100099271	100099271	8553170	2	145,717,	0,2029,
#Partially deleted in new
chr9	100099274	100300788	chr9:100099274-100300788	1	+	100104521	100300674	789624	18	142,130,167,174,168,181,110,172,156,230,107,213,284,111,97,230,75,221,	0,5223,27108,126787,130385,140785,143295,147341,153008,153632,165547,173589,185045,193051,193672,197642,198661,201293,
#Partially deleted in new
chr9	100099287	100130903	chr9:100099287-100130903	1	+	100104521	100129708	789624	4	129,130,167,1228,	0,5210,27095,30388,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	100099302	100226213	chr9:100099302-100226213	0	+	100099302	100099302	8553170	6	114,130,167,116,88,152,	0,5195,27080,115622,116098,126759,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	100102558	100102839	chr9:100102558-100102839	3	+	100102558	100102558	8553170	1	281,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	100104538	100240126	chr9:100104538-100240126	0	+	100104538	100104538	8553170	8	89,167,85,116,88,174,168,67,	0,21844,27331,110386,110862,121523,125121,135521,
#Partially deleted in new
chr9	100116754	100117651	chr9:100116754-100117651	7	-	100116754	100116754	16724991	1	897,	0,
#Partially deleted in new
chr9	100120434	100120900	chr9:100120434-100120900	7	-	100120434	100120434	16724991	1	466,	0,
#Deleted in new
chr9	100175177	100176054	chr9:100175177-100176054	7	+	100175177	100175177	16724991	1	877,	0,
#Partially deleted in new
chr9	100302076	100352571	chr9:100302076-100352571	1	-	100302190	100352421	789624	15	228,154,182,81,134,89,178,176,136,239,113,244,713,186,153,	0,1555,6423,8222,18188,19606,24225,25710,27063,27854,38180,43995,44617,47107,50342,
#Partially deleted in new
chr9	100302083	100352939	chr9:100302083-100352939	3	-	100302190	100349363	789624	15	221,211,182,81,134,89,178,176,136,239,113,244,713,189,168,	0,1548,6416,8215,18181,19599,24218,25703,27056,27847,38173,43988,44610,47100,50688,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	100302085	100307869	chr9:100302085-100307869	0	-	100302085	100302085	8553170	2	219,4238,	0,1546,
#Partially deleted in new
chr9	100329185	100347304	chr9:100329185-100347304	0	-	100329185	100346143	789624	5	90,239,113,244,138,	0,745,11071,16886,17981,
#Partially deleted in new
chr9	100427155	100451229	chr9:100427155-100451229	1	+	100441938	100450966	789624	3	238,451,673,	0,14750,23401,
#Partially deleted in new
chr9	100427206	100442341	chr9:100427206-100442341	0	+	100441938	100442341	789624	3	187,157,436,	0,2299,14699,
#Partially deleted in new
chr9	100427276	100450705	chr9:100427276-100450705	1	+	100441938	100445230	789624	4	117,451,69,149,	0,14629,17892,23280,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	100427428	100451711	chr9:100427428-100451711	3	+	100441938	100450966	789624	3	142,451,1155,	0,14477,23128,
#Partially deleted in new
chr9	100427436	100450681	chr9:100427436-100450681	0	+	100441938	100450681	789624	3	134,451,125,	0,14469,23120,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	100429513	100451711	chr9:100429513-100451711	1	+	100441938	100450966	789624	3	149,451,1155,	0,12392,21043,
#Partially deleted in new
chr9	100442148	100451229	chr9:100442148-100451229	0	+	100442148	100442148	8553170	3	208,1110,673,	0,1979,8408,
#Partially deleted in new
chr9	100442270	100577636	chr9:100442270-100577636	3	+	100442277	100576600	789624	10	86,110,130,27,97,149,66,124,159,1121,	0,56494,66734,71036,74404,105473,107824,119126,130247,134245,
#Partially deleted in new
chr9	100473112	100577636	chr9:100473112-100577636	3	+	100473544	100576600	789624	10	628,110,130,27,97,149,66,124,159,1121,	0,25652,35892,40194,43562,74631,76982,88284,99405,103403,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	100578078	100587906	chr9:100578078-100587906	3	+	100578143	100586451	789624	2	473,2142,	0,7686,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	100581078	100581379	chr9:100581078-100581379	3	-	100581078	100581078	8553170	1	301,	0,
#Deleted in new
chr9	100731239	100732355	chr9:100731239-100732355	7	+	100731239	100731239	16724991	1	1116,	0,
#Deleted in new
chr9	100912319	100912741	chr9:100912319-100912741	7	+	100912319	100912319	16724991	1	422,	0,
#Deleted in new
chr9	100975667	100976682	chr9:100975667-100976682	7	+	100975667	100975667	16724991	1	1015,	0,
#Partially deleted in new
chr9	101028708	101325135	chr9:101028708-101325135	3	+	101185494	101324057	789624	8	394,108,189,133,251,177,132,1111,	0,156741,241171,257395,280502,284089,288656,295316,
#Partially deleted in new
chr9	101125435	101125921	chr9:101125435-101125921	7	-	101125435	101125435	16724991	1	486,	0,
#Partially deleted in new
chr9	101131521	101286160	chr9:101131521-101286160	0	+	101185494	101286160	789624	4	118,108,189,57,	0,53928,138358,154582,
#Partially deleted in new
chr9	101185034	101325131	chr9:101185034-101325131	1	+	101185494	101324057	789624	8	221,108,189,133,251,177,132,1107,	0,415,84845,101069,124176,127763,132330,138990,
#Deleted in new
chr9	101185034	101188026	chr9:101185034-101188026	0	+	101185034	101185034	8553170	3	221,108,757,	0,415,2235,
#Partially deleted in new
chr9	101269801	101312894	chr9:101269801-101312894	0	+	101269801	101269801	8553170	4	267,133,251,97,	0,16302,39409,42996,
#Deleted in new
chr9	101322476	101322533	chr9:101322476-101322533	3	+	101322476	101322476	8553170	1	57,	0,
#Partially deleted in new
chr9	101334083	101339347	chr9:101334083-101339347	7	-	101334083	101334083	16724991	3	613,149,463,	0,3674,4801,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	101356465	101356844	chr9:101356465-101356844	7	-	101356465	101356465	16724991	1	379,	0,
#Duplicated in new
chr9	101358931	101361242	chr9:101358931-101361242	7	+	101358931	101358931	16724991	3	475,652,453,	0,779,1858,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	101360416	101383519	chr9:101360416-101383519	3	-	101362427	101371404	789624	4	2599,203,525,50,	0,7703,10522,23053,
#Partially deleted in new
chr9	101361503	101371475	chr9:101361503-101371475	1	-	101362427	101371404	789624	3	1512,203,537,	0,6616,9435,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	101375343	101376603	chr9:101375343-101376603	7	-	101375343	101375343	16724991	2	281,640,	0,620,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	101387632	101398614	chr9:101387632-101398614	3	-	101390465	101398592	0	2	3218,114,	0,10868,
#Partially deleted in new
chr9	101398872	101410660	chr9:101398872-101410660	1	+	101399156	101409649	789624	3	317,85,2732,	0,1053,9056,
#Partially deleted in new
chr9	101399027	101410660	chr9:101399027-101410660	1	+	101399976	101409649	789624	4	162,136,85,2732,	0,367,898,8901,
#Partially deleted in new
chr9	101399027	101410660	chr9:101399027-101410660	3	+	101399156	101409649	789624	3	162,127,2732,	0,856,8901,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	101420577	101435823	chr9:101420577-101435823	1	-	101421808	101430887	0	9	1327,200,175,84,161,55,212,122,115,	0,4265,4875,5977,6904,7891,9177,10198,15131,
#Partially deleted in new
chr9	101421375	101435774	chr9:101421375-101435774	1	-	101421808	101430887	789624	9	529,200,175,84,161,55,212,122,66,	0,3467,4077,5179,6106,7093,8379,9400,14333,
#Partially deleted in new
chr9	101421438	101449664	chr9:101421438-101449664	3	-	101421808	101430887	789624	9	466,200,175,84,161,55,212,122,137,	0,3404,4014,5116,6043,7030,8316,9337,28089,
#Partially deleted in new
chr9	101421551	101435774	chr9:101421551-101435774	1	-	101424853	101430887	789624	10	353,58,105,175,84,161,55,212,122,66,	0,3291,3386,3901,5003,5930,6917,8203,9224,14157,
#Partially deleted in new
chr9	101421633	101442427	chr9:101421633-101442427	1	-	101421808	101430887	789624	9	271,200,175,84,161,55,212,122,164,	0,3209,3819,4921,5848,6835,8121,9142,20630,
#Partially deleted in new
chr9	101424453	101430907	chr9:101424453-101430907	1	-	101424812	101430887	8553170	7	589,175,84,161,55,212,132,	0,999,2101,3028,4015,5301,6322,
#Partially deleted in new
chr9	101425560	101429875	chr9:101425560-101429875	0	-	101425560	101425560	8553170	3	67,84,67,	0,994,4248,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	101429120	101435774	chr9:101429120-101435774	0	-	101429120	101429120	8553170	3	846,122,66,	0,1655,6588,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	101429139	101431057	chr9:101429139-101431057	0	-	101429139	101429139	8553170	2	827,282,	0,1636,
#Partially deleted in new
chr9	101429853	101442388	chr9:101429853-101442388	0	-	101429853	101430887	8553170	4	113,122,54,125,	0,922,5855,12410,
#Deleted in new
chr9	101449800	101449933	chr9:101449800-101449933	7	+	101449800	101449800	16724991	1	133,	0,
#Partially deleted in new
chr9	101468438	101481502	chr9:101468438-101481502	0	+	101468438	101468438	789624	3	170,84,140,	0,11401,12924,
#Partially deleted in new
chr9	101468461	101481502	chr9:101468461-101481502	3	+	101468461	101468461	789624	4	147,167,84,140,	0,6414,11378,12901,
#Partially deleted in new
chr9	101469321	101481502	chr9:101469321-101481502	0	+	101469321	101469321	789624	2	299,140,	0,12041,
#Partially deleted in new
chr9	101469378	101481502	chr9:101469378-101481502	1	+	101469378	101469378	789624	3	242,84,140,	0,10461,11984,
#Partially deleted in new
chr9	101473170	101487117	chr9:101473170-101487117	1	-	101475880	101477092	789624	3	3999,55,169,	0,7500,13778,
#Partially deleted in new
chr9	101473170	101487193	chr9:101473170-101487193	1	-	101475880	101477092	789624	2	3999,245,	0,13778,
#Partially deleted in new
chr9	101473170	101533448	chr9:101473170-101533448	3	-	101475880	101477092	789624	4	3999,87,212,772,	0,15943,58177,59506,
#Deleted in new
chr9	101501642	101501885	chr9:101501642-101501885	7	-	101501642	101501642	16724991	1	243,	0,
#Partially deleted in new
chr9	101531234	101533537	chr9:101531234-101533537	0	-	101531234	101531234	8553170	2	325,85,	0,2218,
#Partially deleted in new
chr9	101533850	101563344	chr9:101533850-101563344	3	+	101535423	101562422	0	20	64,155,168,148,183,119,147,78,120,180,136,122,371,118,150,213,126,141,102,1099,	0,1547,6352,6639,6942,10916,12969,13286,13548,16755,17833,18290,18532,20137,20843,23533,26950,27239,28059,28395,
#Partially deleted in new
chr9	101533887	101540890	chr9:101533887-101540890	0	+	101535423	101540890	789624	5	27,155,168,148,98,	0,1510,6315,6602,6905,
#Partially deleted in new
chr9	101533904	101540370	chr9:101533904-101540370	0	+	101535423	101540370	789624	3	64,155,168,	0,1493,6298,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	101533957	101540279	chr9:101533957-101540279	0	+	101533957	101533957	8553170	3	343,155,103,	0,1440,6219,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	101533978	101540628	chr9:101533978-101540628	0	+	101535423	101540628	789624	4	322,155,168,139,	0,1419,6224,6511,
#Partially deleted in new
chr9	101560680	101561452	chr9:101560680-101561452	0	+	101560680	101560680	8553170	2	246,363,	0,409,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	101569352	101738580	chr9:101569352-101738580	3	-	101573173	101737979	789624	9	4161,77,165,152,116,146,1048,605,1300,	0,8415,9843,44023,53965,58903,100707,117243,167928,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	101591614	101595001	chr9:101591614-101595001	3	-	101594408	101594930	789624	1	3387,	0,
#Partially deleted in new
chr9	101593753	101595021	chr9:101593753-101595021	1	-	101594408	101594621	789624	2	904,177,	0,1091,
#Partially deleted in new
chr9	101600848	101613522	chr9:101600848-101613522	0	-	101600848	101600848	8553170	3	268,83,147,	0,2103,12527,
#Deleted in new
chr9	101793453	101793756	chr9:101793453-101793756	7	-	101793453	101793453	16724991	1	303,	0,
#Deleted in new
chr9	102055251	102055741	chr9:102055251-102055741	7	-	102055251	102055251	16724991	1	490,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	102256603	102256710	chr9:102256603-102256710	3	+	102256603	102256603	8553170	1	107,	0,
#Partially deleted in new
chr9	102515203	102518308	chr9:102515203-102518308	7	+	102515203	102515203	16724991	1	3105,	0,
#Partially deleted in new
chr9	102611161	102612155	chr9:102611161-102612155	7	-	102611161	102611161	16724991	2	703,134,	0,860,
#Deleted in new
chr9	102922573	102923244	chr9:102922573-102923244	7	+	102922573	102922573	16724991	1	671,	0,
#Partially deleted in new
chr9	102995310	103006378	chr9:102995310-103006378	1	+	102995380	103005678	789624	5	87,41,122,157,1410,	0,6267,7831,9384,9658,
#Partially deleted in new
chr9	102995343	103018488	chr9:102995343-103018488	1	+	102995380	103005678	789624	7	54,41,122,157,1410,105,164,	0,6234,7798,9351,9625,15357,22981,
#Deleted in new
chr9	103065415	103065598	chr9:103065415-103065598	7	+	103065415	103065415	16724991	1	183,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	103140522	103325034	chr9:103140522-103325034	3	-	103140522	103140522	789624	10	2741,56,71,98,127,118,170,140,173,44,	0,3788,47523,87191,124001,135508,136807,174619,179491,184468,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	103207172	103253266	chr9:103207172-103253266	1	-	103207172	103207172	8553170	4	271,98,57,233,	0,20541,36557,45861,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	103276030	103324778	chr9:103276030-103324778	0	-	103276030	103276030	8553170	4	118,170,140,122,	0,1299,39111,48626,
#Partially deleted in new
chr9	103361951	103429892	chr9:103361951-103429892	3	-	103361951	103361951	8553170	3	233,183,110,	0,2928,67831,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	103689472	103689577	chr9:103689472-103689577	7	-	103689472	103689472	16724991	1	105,	0,
#Partially deleted in new
chr9	103999754	104000469	chr9:103999754-104000469	3	+	103999754	103999754	789624	2	72,318,	0,397,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	104080023	104092474	chr9:104080023-104092474	3	-	104080023	104080023	789624	3	6518,116,386,	0,7016,12065,
#Deleted in new
chr9	104092401	104093073	chr9:104092401-104093073	0	-	104092401	104092401	8553170	1	672,	0,
#Partially deleted in new
chr9	104094259	104141409	chr9:104094259-104141409	3	+	104095384	104139315	0	25	218,254,150,123,39,111,45,234,150,234,160,118,139,120,205,136,125,194,144,195,201,117,161,148,2271,	0,1039,1888,4186,5384,5833,6129,7700,8164,17321,19056,19704,20431,21940,23911,25767,28848,30652,32381,33026,35385,37749,40155,43758,44879,
#Partially deleted in new
chr9	104094295	104102193	chr9:104094295-104102193	0	+	104098562	104102193	789624	6	153,123,39,111,45,234,	0,4150,5348,5797,6093,7664,
#Partially deleted in new
chr9	104094325	104141417	chr9:104094325-104141417	1	+	104095384	104139315	0	25	152,229,150,123,39,111,45,234,150,234,160,118,139,120,205,136,125,194,144,195,201,117,161,148,2279,	0,998,1822,4120,5318,5767,6063,7634,8098,17255,18990,19638,20365,21874,23845,25701,28782,30586,32315,32960,35319,37683,40089,43692,44813,
#Partially deleted in new
chr9	104094563	104139651	chr9:104094563-104139651	1	+	104095384	104139315	0	25	275,229,150,123,39,111,45,234,150,234,160,118,139,120,205,136,125,194,144,195,201,117,161,148,513,	0,760,1584,3882,5080,5529,5825,7396,7860,17017,18752,19400,20127,21636,23607,25463,28544,30348,32077,32722,35081,37445,39851,43454,44575,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	104127406	104139652	chr9:104127406-104139652	0	+	104129653	104135898	789624	7	74,201,117,161,193,148,514,	0,2238,4602,7008,8461,10611,11732,
#Partially deleted in new
chr9	104270227	104277826	chr9:104270227-104277826	5	+	104270227	104270227	16724991	2	68,2803,	0,4796,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	104270249	104286955	chr9:104270249-104286955	7	+	104270249	104270249	16724991	4	46,94,97,732,	0,10923,15744,15974,
#Deleted in new
chr9	104275297	104277399	chr9:104275297-104277399	5	+	104275297	104275297	16724991	1	2102,	0,
#Deleted in new
chr9	104328319	104329396	chr9:104328319-104329396	7	-	104328319	104328319	16724991	1	1077,	0,
#Deleted in new
chr9	104504262	104505222	chr9:104504262-104505222	3	+	104504262	104505222	789624	1	960,	0,
#Partially deleted in new
chr9	104520828	104537180	chr9:104520828-104537180	3	+	104520828	104520828	8553170	2	347,1255,	0,15097,
#Deleted in new
chr9	104526252	104527209	chr9:104526252-104527209	3	-	104526252	104527209	789624	1	957,	0,
#Deleted in new
chr9	104535748	104536856	chr9:104535748-104536856	1	-	104535769	104536813	789624	1	1108,	0,
#Deleted in new
chr9	104535748	104536856	chr9:104535748-104536856	3	-	104535769	104536723	789624	1	1108,	0,
#Deleted in new
chr9	104569167	104570130	chr9:104569167-104570130	3	+	104569167	104570130	789624	1	963,	0,
#Partially deleted in new
chr9	104590043	104590950	chr9:104590043-104590950	7	+	104590043	104590043	16724991	1	907,	0,
#Deleted in new
chr9	104598456	104599413	chr9:104598456-104599413	3	-	104598456	104599413	789624	1	957,	0,
#Deleted in new
chr9	104604670	104605627	chr9:104604670-104605627	3	-	104604670	104605627	789624	1	957,	0,
#Deleted in new
chr9	104617247	104618204	chr9:104617247-104618204	3	-	104617247	104618204	789624	1	957,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	104629753	104631017	chr9:104629753-104631017	7	+	104629753	104629753	16724991	1	1264,	0,
#Deleted in new
chr9	104655362	104659055	chr9:104655362-104659055	7	-	104655362	104655362	16724991	2	2475,444,	0,3249,
#Deleted in new
chr9	104656753	104657716	chr9:104656753-104657716	5	-	104656753	104656753	16724991	1	963,	0,
#Deleted in new
chr9	104694378	104695485	chr9:104694378-104695485	3	+	104694421	104695462	789624	1	1107,	0,
#Deleted in new
chr9	104694517	104695462	chr9:104694517-104695462	1	+	104694517	104695462	789624	1	945,	0,
#Deleted in new
chr9	104722334	104723271	chr9:104722334-104723271	7	+	104722334	104722334	16724991	1	937,	0,
#Partially deleted in new
chr9	104747687	104760122	chr9:104747687-104760122	3	+	104747792	104759338	789624	6	165,211,159,150,87,861,	0,3268,5218,6863,11397,11574,
#Partially deleted in new
chr9	104753598	104759130	chr9:104753598-104759130	0	+	104753598	104753598	8553170	2	1102,46,	0,5486,
#Partially deleted in new
chr9	104764156	104777457	chr9:104764156-104777457	0	+	104764240	104773073	789624	6	144,211,159,87,180,330,	0,2168,4706,8665,8840,12971,
#Partially deleted in new
chr9	104764169	104774010	chr9:104764169-104774010	3	+	104764240	104773073	789624	6	131,211,159,150,87,1014,	0,2155,4693,6679,8652,8827,
#Partially deleted in new
chr9	104764194	104773146	chr9:104764194-104773146	0	+	104764194	104764194	8553170	6	106,159,150,83,87,150,	0,4668,6654,7039,8627,8802,
#Partially deleted in new
chr9	104781001	104928237	chr9:104781001-104928237	3	-	104784314	104903679	0	50	3454,244,93,104,135,142,107,63,121,130,124,145,116,178,170,75,106,33,95,190,99,125,149,114,49,203,73,221,138,143,132,172,114,205,222,223,177,206,198,117,140,241,93,177,122,119,142,94,158,303,	0,4394,5296,5871,6918,7424,9920,10934,11784,12169,13385,15051,15307,17419,18817,19508,21052,22282,23624,25239,28464,29798,31572,33116,33425,35141,36330,37661,38584,38925,40373,41494,43463,44681,45946,47914,49923,50620,51572,55978,56426,59277,64475,77520,80677,102037,103425,108100,122612,146933,
#Partially deleted in new
chr9	104825590	104830989	chr9:104825590-104830989	0	-	104825590	104825590	8553170	4	297,222,223,65,	0,1357,3325,5334,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	104855565	104928139	chr9:104855565-104928139	1	-	104855716	104903679	789624	8	523,177,122,119,142,94,158,205,	0,2956,6113,27473,28861,33536,48048,72369,
#Partially deleted in new
chr9	104861437	104928139	chr9:104861437-104928139	1	-	104861669	104884548	789624	5	363,119,142,94,205,	0,21601,22989,27664,66497,
#Partially deleted in new
chr9	104927552	104928892	chr9:104927552-104928892	3	+	104927552	104927552	8553170	2	358,111,	0,1229,
#Deleted in new
chr9	104990795	104991781	chr9:104990795-104991781	3	-	104990795	104990795	8553170	2	508,98,	0,888,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	105096755	105097061	chr9:105096755-105097061	3	+	105096755	105096755	8553170	1	306,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr9	105244621	105397346	chr9:105244621-105397346	3	+	105244868	105389056	789624	16	283,90,143,137,94,170,90,140,187,166,157,84,138,237,81,8314,	0,54598,65102,90941,103736,111590,113722,116569,118199,119933,120861,121724,129976,138501,140800,144411,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr9	105244621	105397346	chr9:105244621-105397346	1	+	105244868	105389912	789624	16	283,90,143,137,94,170,90,140,187,166,157,84,138,237,81,7443,	0,54598,65102,90941,103736,111590,113722,116569,118199,119933,120861,121724,129976,138501,140800,145282,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr9	105244621	105439171	chr9:105244621-105439171	1	+	105244868	105438295	789624	16	283,90,143,137,94,170,90,140,187,166,157,84,138,237,81,891,	0,54598,65102,90941,103736,111590,113722,116569,118199,119933,120861,121724,129976,138501,140800,193659,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr9	105244621	105397346	chr9:105244621-105397346	0	+	105244868	105389056	789624	17	283,90,143,137,94,170,90,140,187,166,157,84,138,237,81,76,8160,	0,54598,65102,90941,103736,111590,113722,116569,118199,119933,120861,121724,129976,138501,140800,144411,144565,
#Partially deleted in new
chr9	105294665	105335587	chr9:105294665-105335587	0	+	105294665	105294665	8553170	5	133,90,195,143,25,	0,4554,5077,15058,40897,
#Deleted in new
chr9	105355916	105357243	chr9:105355916-105357243	0	+	105355916	105355916	8553170	2	465,93,	0,1234,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	105386687	105396018	chr9:105386687-105396018	0	+	105386687	105386687	8553170	2	54,522,	0,8809,
#Partially deleted in new
chr9	105447795	105530963	chr9:105447795-105530963	1	+	105448220	105530628	789624	11	440,96,96,132,102,23,122,210,99,130,456,	0,13724,16440,20397,24108,31558,36585,58603,60821,65011,82712,
#Partially deleted in new
chr9	105448033	105552433	chr9:105448033-105552433	1	+	105448220	105546483	789624	14	202,96,132,102,23,122,210,99,130,33,98,252,89,6076,	0,16202,20159,23870,31320,36347,58365,60583,64773,65565,86462,87033,91229,98324,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	105448044	105473320	chr9:105448044-105473320	1	+	105448220	105472098	789624	4	191,96,132,1417,	0,16191,20148,23859,
#Partially deleted in new
chr9	105448101	105546575	chr9:105448101-105546575	1	+	105448220	105546483	789624	14	134,96,96,132,102,23,122,210,99,130,101,252,89,218,	0,13418,16134,20091,23802,31252,36279,58297,60515,64705,86391,86965,91161,98256,
#Partially deleted in new
chr9	105448122	105546802	chr9:105448122-105546802	1	+	105448220	105546483	789624	14	113,96,132,102,23,122,210,99,130,33,101,252,89,445,	0,16113,20070,23781,31231,36258,58276,60494,64684,65476,86370,86944,91140,98235,
#Partially deleted in new
chr9	105448122	105546602	chr9:105448122-105546602	3	+	105448220	105546483	789624	13	113,96,132,102,23,122,210,99,130,98,252,89,245,	0,16113,20070,23781,31231,36258,58276,60494,64684,86373,86944,91140,98235,
#Partially deleted in new
chr9	105448135	105506475	chr9:105448135-105506475	0	+	105448135	105448135	8553170	6	41,92,132,102,122,77,	0,16104,20057,23768,36245,58263,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	105500658	105552433	chr9:105500658-105552433	1	+	105506469	105546483	789624	8	105,210,99,130,101,252,89,6076,	0,5740,7958,12148,33834,34408,38604,45699,
#Deleted in new
chr9	105520127	105526359	chr9:105520127-105526359	7	+	105520127	105520127	16724991	1	6232,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	105554034	105558029	chr9:105554034-105558029	3	-	105554034	105554034	8553170	3	309,62,260,	0,3079,3735,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	105558129	105641118	chr9:105558129-105641118	3	+	105575032	105635264	789624	10	36,193,60,204,278,133,130,134,128,6068,	0,16815,38468,43015,46085,49689,57148,59829,61804,76921,
#Partially deleted in new
chr9	105558129	105636238	chr9:105558129-105636238	1	+	105575032	105635264	789624	11	36,92,193,60,204,278,133,130,134,128,1188,	0,15525,16815,38468,43015,46085,49689,57148,59829,61804,76921,
#Partially deleted in new
chr9	105558131	105640316	chr9:105558131-105640316	1	+	105575032	105640123	789624	12	34,92,193,60,204,278,133,130,134,128,98,216,	0,15523,16813,38466,43013,46083,49687,57146,59827,61802,76919,81969,
#Partially deleted in new
chr9	105558140	105596730	chr9:105558140-105596730	0	+	105558140	105558140	8553170	3	25,193,133,	0,16804,38457,
#Partially deleted in new
chr9	105558149	105575018	chr9:105558149-105575018	0	+	105558149	105558149	8553170	4	16,92,135,74,	0,15505,16048,16795,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	105574916	105641118	chr9:105574916-105641118	1	+	105575032	105640123	789624	10	221,60,204,278,133,130,134,128,98,1018,	0,21681,26228,29298,32902,40361,43042,45017,60134,65184,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	105575000	105640640	chr9:105575000-105640640	0	+	105575032	105600956	789624	11	137,60,124,204,118,278,133,130,134,128,5590,	0,21597,25917,26144,28698,29214,32818,40277,42958,44933,60050,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	105575004	105636898	chr9:105575004-105636898	0	+	105575032	105623068	789624	13	133,60,204,278,133,130,134,128,172,115,119,98,226,	0,21593,26140,29210,32814,40273,42954,44929,48045,49277,58351,60046,61668,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr9	105575004	105636907	chr9:105575004-105636907	0	+	105575032	105601014	789624	15	133,60,71,124,204,278,133,130,134,128,172,115,119,98,235,	0,21593,23626,25913,26140,29210,32814,40273,42954,44929,48045,49277,58351,60046,61668,
#Partially deleted in new
chr9	105575004	105620146	chr9:105575004-105620146	0	+	105575032	105598091	789624	10	133,60,98,196,204,278,133,130,134,213,	0,21593,23081,23501,26140,29210,32814,40273,42954,44929,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr9	105575004	105636906	chr9:105575004-105636906	0	+	105575032	105598091	789624	14	133,60,98,71,204,278,133,130,134,156,172,115,98,234,	0,21593,23081,23626,26140,29210,32814,40273,42954,44901,48045,49277,60046,61668,
#Partially deleted in new
chr9	105575119	105607946	chr9:105575119-105607946	0	+	105575119	105598091	789624	6	18,60,98,204,278,128,	0,21478,22966,26025,29095,32699,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	105596636	105640723	chr9:105596636-105640723	0	+	105596636	105598091	789624	13	21,98,71,204,278,133,130,134,156,172,115,98,623,	0,1449,1994,4508,7578,11182,18641,21322,23269,26413,27645,38414,43464,
#Partially deleted in new
chr9	105617958	105636918	chr9:105617958-105636918	0	+	105617958	105636794	789624	4	134,128,98,246,	0,1975,17092,18714,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	105620043	105640721	chr9:105620043-105640721	0	+	105620043	105624373	789624	6	49,172,115,119,98,621,	0,3006,4238,13312,15007,20057,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	105656368	105657989	chr9:105656368-105657989	3	+	105656368	105656368	8553170	1	1621,	0,
#Deleted in new
chr9	105662456	105663112	chr9:105662456-105663112	3	+	105662496	105662823	789624	1	656,	0,
#Partially deleted in new
chr9	105694543	105776612	chr9:105694543-105776612	3	+	105694660	105774080	789624	6	229,157,185,88,118,2748,	0,11053,26993,27990,53529,79321,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	105694543	105705753	chr9:105694543-105705753	0	+	105705646	105705753	789624	3	229,116,157,	0,8163,11053,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	105700983	105776612	chr9:105700983-105776612	1	+	105705646	105774080	789624	6	660,157,185,88,118,2748,	0,4613,20553,21550,47089,72881,
#Partially deleted in new
chr9	105705674	105774079	chr9:105705674-105774079	0	+	105705674	105749093	789624	6	79,185,88,118,36,215,	0,15862,16859,42398,43401,68190,
#Deleted in new
chr9	105710289	105710781	chr9:105710289-105710781	7	-	105710289	105710289	16724991	1	492,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	105721686	105749282	chr9:105721686-105749282	0	+	105721686	105749075	789624	4	35,88,118,210,	0,847,26386,27386,
#Deleted in new
chr9	105758163	105760755	chr9:105758163-105760755	7	+	105758163	105758163	16724991	2	48,2386,	0,206,
#Deleted in new
chr9	105849709	105850603	chr9:105849709-105850603	5	+	105849709	105849709	16724991	1	894,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	105850024	105851425	chr9:105850024-105851425	7	+	105850024	105850024	16724991	2	765,273,	0,1128,
#Partially deleted in new
chr9	106061353	106064825	chr9:106061353-106064825	3	-	106061353	106061353	8553170	2	266,190,	0,3282,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	106278391	106604795	chr9:106278391-106604795	1	+	106278391	106278391	8553170	7	81,90,126,149,112,88,1040,	0,709,221095,221965,280080,309985,325364,
#Partially deleted in new
chr9	106450815	106604795	chr9:106450815-106604795	0	+	106450815	106450815	8553170	4	73,112,88,1040,	0,107656,137561,152940,
#Partially deleted in new
chr9	106584141	106591952	chr9:106584141-106591952	3	-	106584141	106584141	8553170	2	134,237,	0,7574,
#Partially deleted in new
chr9	106600927	106601022	chr9:106600927-106601022	3	+	106600927	106600927	5263520	1	95,	0,
#Partially deleted in new
chr9	106615077	106615806	chr9:106615077-106615806	3	-	106615077	106615077	8553170	2	133,464,	0,265,
#Partially deleted in new
chr9	106616057	106679798	chr9:106616057-106679798	0	+	106616057	106616057	789624	7	259,94,98,125,1166,71,241,	0,22101,23281,48695,50499,56811,63500,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	106679976	106680329	chr9:106679976-106680329	3	+	106679976	106679976	8553170	1	353,	0,
#Deleted in new
chr9	106722349	106722930	chr9:106722349-106722930	7	+	106722349	106722349	16724991	1	581,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	106843748	106843866	chr9:106843748-106843866	7	-	106843748	106843748	16724991	1	118,	0,
#Partially deleted in new
chr9	106863096	107013634	chr9:106863096-107013634	3	+	106923383	107011030	0	13	259,250,5627,165,104,119,192,268,137,224,133,124,2812,	0,60257,61036,67428,69349,72406,75819,108908,111040,121089,140197,146448,147726,
#Partially deleted in new
chr9	106863165	106930575	chr9:106863165-106930575	0	+	106923383	106930575	789624	4	190,250,60,51,	0,60188,60967,67359,
#Deleted in new
chr9	106926924	106932462	chr9:106926924-106932462	0	+	106926924	106926924	8553170	3	240,165,17,	0,3600,5521,
#Partially deleted in new
chr9	106927263	107011508	chr9:106927263-107011508	0	+	106927263	107011030	789624	11	2496,165,284,119,192,268,137,224,133,124,686,	0,3261,5002,8239,11652,44741,46873,56922,76030,82281,83559,
#Partially deleted in new
chr9	106927377	107011482	chr9:106927377-107011482	1	+	106927377	107011030	0	11	2382,165,287,119,192,268,137,224,133,124,660,	0,3147,4885,8125,11538,44627,46759,56808,75916,82167,83445,
#Partially deleted in new
chr9	106929679	106935621	chr9:106929679-106935621	0	+	106929679	106929679	8553170	5	80,165,193,284,119,	0,845,1165,2586,5823,
#Partially deleted in new
chr9	106932607	106974220	chr9:106932607-106974220	0	+	106932607	106932607	8553170	4	198,119,268,84,	0,2895,39397,41529,
#Partially deleted in new
chr9	106932620	106939094	chr9:106932620-106939094	0	+	106932620	106932620	8553170	4	185,55,119,179,	0,554,2882,6295,
#Partially deleted in new
chr9	106932636	106972225	chr9:106932636-106972225	0	+	106932636	106932636	8553170	4	169,119,192,221,	0,2866,6279,39368,
#Partially deleted in new
chr9	106938976	106974970	chr9:106938976-106974970	0	+	106938976	106974362	789624	3	131,268,834,	0,33028,35160,
#Partially deleted in new
chr9	106972141	106995682	chr9:106972141-106995682	0	+	106972141	106972141	8553170	4	131,137,224,163,	0,1995,12044,23378,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	106974832	107102988	chr9:106974832-107102988	3	-	106974832	106974832	789624	5	1822,75,85,80,215,	0,86317,122342,127536,127941,
#Deleted in new
chr9	106978775	106979554	chr9:106978775-106979554	7	-	106978775	106978775	16724991	1	779,	0,
#Deleted in new
chr9	107009188	107011018	chr9:107009188-107011018	0	+	107009188	107009188	8553170	2	480,196,	0,1634,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	107102043	107102872	chr9:107102043-107102872	0	-	107102043	107102043	8553170	2	405,99,	0,730,
#Deleted in new
chr9	107115783	107115954	chr9:107115783-107115954	7	+	107115783	107115783	16724991	1	171,	0,
#Partially deleted in new
chr9	107116828	107117557	chr9:107116828-107117557	7	+	107116828	107116828	16724991	1	729,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	107117458	107121705	chr9:107117458-107121705	3	-	107117458	107117458	8553170	3	95,108,126,	0,631,4121,
#Deleted in new
chr9	107169568	107171148	chr9:107169568-107171148	7	-	107169568	107169568	16724991	1	1580,	0,
#Partially deleted in new
chr9	107283136	107306590	chr9:107283136-107306590	0	+	107283629	107306590	789624	5	173,169,82,80,212,	0,390,17004,18898,23242,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	107283278	107332194	chr9:107283278-107332194	3	+	107283629	107329656	0	10	417,82,80,269,56,128,136,128,171,2652,	0,16862,18756,23100,28403,35473,38704,40611,41555,46264,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	107284052	107332192	chr9:107284052-107332192	1	+	107302102	107329656	0	10	135,82,80,269,56,128,136,128,171,2650,	0,16088,17982,22326,27629,34699,37930,39837,40781,45490,
#Partially deleted in new
chr9	107284694	107306453	chr9:107284694-107306453	0	+	107284910	107306453	789624	4	219,82,80,75,	0,15446,17340,21684,
#Partially deleted in new
chr9	107306541	107332189	chr9:107306541-107332189	0	+	107306541	107331722	789624	4	106,56,128,521,	0,5140,12210,25127,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	107420283	107430802	chr9:107420283-107430802	3	-	107420283	107420283	8553170	4	137,55,128,88,	0,6997,8008,10431,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	107427239	107428402	chr9:107427239-107428402	0	-	107427239	107427239	8553170	2	96,111,	0,1052,
#Deleted in new
chr9	107458037	107458306	chr9:107458037-107458306	7	-	107458037	107458037	16724991	1	269,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	107475035	107475139	chr9:107475035-107475139	3	-	107475035	107475035	8553170	1	104,	0,
#Deleted in new
chr9	107484851	107489646	chr9:107484851-107489646	3	-	107485750	107489172	789624	5	1075,165,973,121,479,	0,2176,2443,4078,4316,
#Deleted in new
chr9	107484851	107489437	chr9:107484851-107489437	0	-	107484851	107484851	8553170	4	1075,1240,121,270,	0,2176,4078,4316,
#Deleted in new
chr9	107484851	107488447	chr9:107484851-107488447	0	-	107484851	107484851	8553170	3	1075,165,1153,	0,2176,2443,
#Deleted in new
chr9	107484853	107489766	chr9:107484853-107489766	1	-	107485750	107489028	789624	4	1073,163,121,599,	0,2174,4076,4314,
#Deleted in new
chr9	107487668	107489130	chr9:107487668-107489130	0	-	107487668	107489028	789624	2	599,201,	0,1261,
#Deleted in new
chr9	107488988	107490482	chr9:107488988-107490482	0	-	107488988	107489172	789624	3	62,396,364,	0,179,1130,
#Partially deleted in new
chr9	107534389	107535162	chr9:107534389-107535162	7	+	107534389	107534389	16724991	2	292,149,	0,624,
#Deleted in new
chr9	107543150	107543616	chr9:107543150-107543616	7	-	107543150	107543150	16724991	1	466,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	107663139	107663246	chr9:107663139-107663246	3	-	107663139	107663139	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	107797743	107797847	chr9:107797743-107797847	3	-	107797743	107797743	8553170	1	104,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	107811615	107811914	chr9:107811615-107811914	3	-	107811615	107811615	8553170	1	299,	0,
#Partially deleted in new
chr9	107834508	107834829	chr9:107834508-107834829	7	-	107834508	107834508	16724991	1	321,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	107853782	107854258	chr9:107853782-107854258	7	-	107853782	107853782	16724991	2	23,154,	0,322,
#Deleted in new
chr9	107918865	107918978	chr9:107918865-107918978	7	-	107918865	107918865	16724991	1	113,	0,
#Deleted in new
chr9	107963702	107964045	chr9:107963702-107964045	7	-	107963702	107963702	16724991	1	343,	0,
#Deleted in new
chr9	108040212	108040592	chr9:108040212-108040592	7	+	108040212	108040212	16724991	1	380,	0,
#Deleted in new
chr9	108097431	108097851	chr9:108097431-108097851	7	-	108097431	108097431	16724991	1	420,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	108252153	108254820	chr9:108252153-108254820	3	-	108252153	108252153	8553170	2	115,109,	0,2558,
#Deleted in new
chr9	108626832	108627150	chr9:108626832-108627150	7	+	108626832	108626832	16724991	1	318,	0,
#Partially deleted in new
chr9	108701369	108703092	chr9:108701369-108703092	3	-	108701369	108701369	8553170	2	73,327,	0,1396,
#Partially deleted in new
chr9	108821696	108822004	chr9:108821696-108822004	7	+	108821696	108821696	16724991	1	308,	0,
#Deleted in new
chr9	108836332	108836597	chr9:108836332-108836597	7	+	108836332	108836332	16724991	1	265,	0,
#Deleted in new
chr9	108854588	108856967	chr9:108854588-108856967	3	-	108854682	108855930	789624	1	2379,	0,
#Deleted in new
chr9	108862265	108863759	chr9:108862265-108863759	3	+	108862322	108863630	0	1	1494,	0,
#Boundary problem: need 37, got 0, diff 37, mapped 0.0
chr9	108867516	108934116	chr9:108867516-108934116	3	-	108869114	108931146	0	37	1666,76,155,128,112,114,61,63,62,202,98,124,149,86,138,80,79,74,116,106,54,104,107,183,100,171,231,94,124,91,97,86,81,82,153,205,253,	0,7378,10478,11106,11929,12535,14188,14608,21815,23686,25469,26426,28979,29436,29631,30985,31154,32305,32743,33908,34111,35322,36046,38786,40788,43493,44747,48687,50030,51294,51736,55325,59006,59855,62252,63480,66347,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	108867516	108893083	chr9:108867516-108893083	0	-	108875690	108893083	789624	12	1666,76,103,155,128,112,114,61,63,62,202,98,	0,7378,8116,10478,11106,11929,12535,14188,14608,21815,23686,25469,
#Partially deleted in new
chr9	108868640	108933953	chr9:108868640-108933953	1	-	108869114	108912405	789624	30	542,76,155,128,112,114,61,63,62,202,98,124,149,86,138,80,79,74,116,106,54,104,107,183,100,171,231,94,124,90,	0,6254,9354,9982,10805,11411,13064,13484,20691,22562,24345,25302,27855,28312,28507,29861,30030,31181,31619,32784,32987,34198,34922,37662,39664,42369,43623,47563,48906,65223,
#Partially deleted in new
chr9	108879460	108889684	chr9:108879460-108889684	0	-	108879460	108879460	8553170	6	97,114,61,63,62,40,	0,591,2244,2664,9871,10184,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	108934180	108940968	chr9:108934180-108940968	3	+	108934486	108939686	789624	6	385,52,130,77,70,1420,	0,1457,2127,5015,5204,5368,
#Partially deleted in new
chr9	108934442	108936075	chr9:108934442-108936075	0	+	108934442	108934442	8553170	2	123,438,	0,1195,
#Partially deleted in new
chr9	108934486	108950744	chr9:108934486-108950744	1	+	108934486	108950593	789624	4	79,52,130,238,	0,1151,1821,16020,
#Partially deleted in new
chr9	108934539	108939634	chr9:108934539-108939634	0	+	108934539	108939634	789624	5	26,130,77,70,86,	0,1768,4656,4845,5009,
#Partially deleted in new
chr9	108942568	109013522	chr9:108942568-109013522	1	-	108942853	109013442	789624	19	303,84,114,57,49,155,51,38,151,93,159,87,201,171,90,120,188,190,221,	0,392,1134,1393,5617,9640,9875,13221,22809,27833,30106,34393,36712,40576,41778,48157,50063,56498,70733,
#Partially deleted in new
chr9	108942570	109013529	chr9:108942570-109013529	3	-	108942768	109013442	789624	19	264,84,114,57,49,155,51,38,151,93,159,87,201,171,90,120,188,190,228,	0,390,1132,1391,5615,9638,9873,13219,22807,27831,30104,34391,36710,40574,41776,48155,50061,56496,70731,
#Partially deleted in new
chr9	108942578	108963555	chr9:108942578-108963555	1	-	108942768	108952246	789624	8	256,84,114,57,49,155,51,58,	0,382,1124,1383,5607,9630,9865,20919,
#Partially deleted in new
chr9	108972674	108977420	chr9:108972674-108977420	0	-	108972674	108972674	8553170	2	159,459,	0,4287,
#Partially deleted in new
chr9	108991895	109013512	chr9:108991895-109013512	1	-	108992034	109013442	789624	4	172,188,190,211,	0,736,7171,21406,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr9	109015151	109119945	chr9:109015151-109119945	3	-	109020459	109119913	789624	18	5354,195,175,101,146,123,132,99,91,83,105,24,170,234,117,102,118,611,	0,18155,21054,22865,35131,35418,42039,45202,49325,58204,65687,70845,72021,75770,78323,91356,93301,104183,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	109018925	109039327	chr9:109018925-109039327	0	-	109018925	109018925	8553170	4	1580,195,175,1311,	0,14381,17280,19091,
#Partially deleted in new
chr9	109019903	109087293	chr9:109019903-109087293	0	-	109020459	109087293	789624	12	602,195,175,101,146,123,132,99,91,83,105,121,	0,13403,16302,18113,30379,30666,37287,40450,44573,53452,60935,67269,
#Partially deleted in new
chr9	109020087	109108488	chr9:109020087-109108488	0	-	109073351	109106556	789624	16	418,195,175,101,146,123,132,99,91,191,105,170,234,117,102,36,	0,13219,16118,17929,30195,30482,37103,40266,44389,53160,60751,67085,70834,73387,86420,88365,
#Partially deleted in new
chr9	109036019	109038210	chr9:109036019-109038210	0	-	109036019	109036019	8553170	2	361,194,	0,1997,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	109042385	109042487	chr9:109042385-109042487	3	-	109042385	109042385	8553170	1	102,	0,
#Deleted in new
chr9	109046228	109046298	chr9:109046228-109046298	3	-	109046228	109046228	5263520	1	70,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	109130292	109167295	chr9:109130292-109167295	3	-	109137454	109167291	789624	5	7335,247,139,85,395,	0,11050,16758,19343,36608,
#Partially deleted in new
chr9	109137445	109167003	chr9:109137445-109167003	0	-	109147130	109167003	789624	4	182,247,139,103,	0,3897,9605,29455,
#Partially deleted in new
chr9	109137622	109150811	chr9:109137622-109150811	0	-	109150786	109150811	789624	6	5,247,139,125,85,110,	0,3720,9428,10820,12013,13079,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	109137656	109148263	chr9:109137656-109148263	0	-	109137656	109137656	8553170	2	3933,1213,	0,9394,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	109140789	109152193	chr9:109140789-109152193	0	-	109140789	109140789	8553170	3	800,139,2558,	0,6261,8846,
#Partially deleted in new
chr9	109141560	109166933	chr9:109141560-109166933	0	-	109150786	109166933	789624	5	29,139,85,159,33,	0,5490,8075,9141,25340,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr9	109171974	109320964	chr9:109171974-109320964	3	-	109174553	109320446	789624	26	2649,146,69,117,78,178,99,68,126,119,224,65,34,31,110,170,70,89,88,121,53,45,79,43,105,824,	0,4576,10754,13514,20303,22245,28261,31688,35949,41725,44947,71643,75781,79506,81466,83536,83799,84161,84418,86202,91075,93005,95498,96416,107842,148166,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	109196200	109196309	chr9:109196200-109196309	3	-	109196200	109196200	8553170	1	109,	0,
#Partially deleted in new
chr9	109239730	109320964	chr9:109239730-109320964	1	-	109241661	109320446	789624	16	2079,65,34,31,110,170,70,89,88,121,53,45,79,43,105,824,	0,3887,8025,11750,13710,15780,16043,16405,16662,18446,23319,25249,27742,28660,40086,80410,
#Partially deleted in new
chr9	109300185	109301172	chr9:109300185-109301172	7	+	109300185	109300185	16724991	2	302,346,	0,641,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	109324684	109324796	chr9:109324684-109324796	3	+	109324684	109324684	8553170	1	112,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	109375465	109378980	chr9:109375465-109378980	0	-	109375465	109375465	8553170	2	149,438,	0,3077,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr9	109375693	109498313	chr9:109375693-109498313	1	-	109382425	109463434	789624	26	3940,136,146,245,147,62,91,161,157,57,78,187,177,135,173,64,89,88,121,53,45,79,43,108,155,95,	0,5958,6608,7613,13539,15444,15777,28754,30768,32627,34305,34535,44730,47024,51256,52927,57379,61189,62420,69546,73117,78802,81479,81598,87603,122525,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr9	109375693	109451384	chr9:109375693-109451384	1	-	109379555	109448830	0	21	3940,136,146,129,147,62,91,161,157,57,78,187,177,135,173,64,89,88,121,53,2574,	0,5958,6608,7729,13539,15444,15777,28754,30768,32627,34305,34535,44730,47024,51256,52927,57379,61189,62420,69546,73117,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr9	109375693	109451384	chr9:109375693-109451384	1	-	109379555	109448830	0	20	3940,136,146,129,147,62,91,161,157,57,78,187,177,173,64,89,88,121,53,2574,	0,5958,6608,7729,13539,15444,15777,28754,30768,32627,34305,34535,44730,51256,52927,57379,61189,62420,69546,73117,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr9	109375699	109498306	chr9:109375699-109498306	3	-	109379555	109463434	0	26	3934,136,146,129,147,62,91,161,157,57,78,187,177,135,173,64,89,88,121,53,45,79,43,108,155,88,	0,5952,6602,7723,13533,15438,15771,28748,30762,32621,34299,34529,44724,47018,51250,52921,57373,61183,62414,69540,73111,78796,81473,81592,87597,122519,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	109389236	109397770	chr9:109389236-109397770	0	-	109389236	109389236	8553170	5	143,62,91,348,137,	0,1901,2234,3362,8397,
#Deleted in new
chr9	109511474	109511545	chr9:109511474-109511545	3	-	109511474	109511474	5263520	1	71,	0,
#Partially deleted in new
chr9	109532829	109534332	chr9:109532829-109534332	7	-	109532829	109532829	16724991	2	114,888,	0,615,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	109640787	109946703	chr9:109640787-109946703	3	+	109640861	109943425	789624	7	79,46,81,131,115,22,4018,	0,139700,226703,239763,282947,284273,301898,
#Partially deleted in new
chr9	109760359	109772043	chr9:109760359-109772043	3	-	109760359	109760359	8553170	3	261,148,69,	0,5053,11615,
#Partially deleted in new
chr9	109780308	110172512	chr9:109780308-110172512	3	+	109780488	110168497	789624	11	225,81,131,115,22,102,86,2413,179,39,4114,	0,87182,100242,143426,144752,151618,235645,355818,376010,381785,388090,
#Partially deleted in new
chr9	109780402	109943623	chr9:109780402-109943623	1	+	109780488	109943425	789624	6	131,81,131,115,22,938,	0,87088,100148,143332,144658,162283,
#Partially deleted in new
chr9	109780438	109943471	chr9:109780438-109943471	1	+	109780488	109943425	789624	7	95,81,131,115,22,102,786,	0,87052,100112,143296,144622,151488,162247,
#Partially deleted in new
chr9	109780438	110136149	chr9:109780438-110136149	0	+	109780488	110136149	789624	9	95,81,131,115,22,102,696,86,23,	0,87052,100112,143296,144622,151488,162247,235515,355688,
#Partially deleted in new
chr9	109780455	110169909	chr9:109780455-110169909	1	+	109780488	110168497	789624	10	78,81,131,115,22,102,86,2413,179,1511,	0,87035,100095,143279,144605,151471,235498,355671,375863,387943,
#Partially deleted in new
chr9	109867030	109942773	chr9:109867030-109942773	0	+	109867071	109942773	789624	7	44,81,131,115,22,102,88,	0,460,13520,56704,58030,64896,75655,
#Partially deleted in new
chr9	109867270	109923849	chr9:109867270-109923849	0	+	109867270	109867270	8553170	3	301,131,115,	0,13280,56464,
#Deleted in new
chr9	110024880	110025358	chr9:110024880-110025358	7	-	110024880	110024880	16724991	1	478,	0,
#Partially deleted in new
chr9	110048597	110169909	chr9:110048597-110169909	3	+	110048699	110168497	789624	5	258,2413,179,39,1511,	0,87529,107721,113496,119801,
#Partially deleted in new
chr9	110048695	110172512	chr9:110048695-110172512	1	+	110048699	110168497	789624	4	160,2413,179,4114,	0,87431,107623,119703,
#Partially deleted in new
chr9	110048697	110168633	chr9:110048697-110168633	0	+	110048699	110156327	789624	3	158,179,235,	0,107621,119701,
#Partially deleted in new
chr9	110090196	110138426	chr9:110090196-110138426	0	+	110090380	110138426	789624	2	220,2300,	0,45930,
#Partially deleted in new
chr9	110125500	110168811	chr9:110125500-110168811	1	+	110136237	110168497	789624	4	96,2413,179,413,	0,10626,30818,42898,
#Partially deleted in new
chr9	110127645	110136334	chr9:110127645-110136334	0	+	110127645	110127645	8553170	2	367,208,	0,8481,
#Partially deleted in new
chr9	110138170	110168889	chr9:110138170-110168889	0	+	110138170	110138170	8553170	2	369,491,	0,30228,
#Partially deleted in new
chr9	110148527	110168406	chr9:110148527-110168406	0	+	110148527	110148527	8553170	3	176,179,8,	0,7791,19871,
#Partially deleted in new
chr9	110190047	110207480	chr9:110190047-110207480	0	-	110190047	110190047	8553170	2	230,94,	0,17339,
#Partially deleted in new
chr9	110199560	110208189	chr9:110199560-110208189	3	-	110200947	110207579	789624	2	1914,803,	0,7826,
#Partially deleted in new
chr9	110243810	110256466	chr9:110243810-110256466	1	-	110244156	110256435	0	4	409,66,105,55,	0,967,7547,12601,
#Partially deleted in new
chr9	110243810	110256640	chr9:110243810-110256640	3	-	110244156	110256435	0	5	409,66,60,105,229,	0,967,7009,7547,12601,
#Deleted in new
chr9	110244018	110245116	chr9:110244018-110245116	0	-	110244018	110244018	8553170	2	201,339,	0,759,
#Partially deleted in new
chr9	110303520	110337884	chr9:110303520-110337884	1	-	110303520	110337796	789624	6	63,66,66,60,105,112,	0,946,22654,25711,30695,34252,
#Partially deleted in new
chr9	110303586	110337808	chr9:110303586-110337808	3	-	110303681	110337796	789624	6	122,66,66,60,105,36,	0,880,22588,25645,30629,34186,
#Partially deleted in new
chr9	110303625	110337808	chr9:110303625-110337808	1	-	110303681	110337796	789624	5	83,66,66,105,36,	0,841,22549,30590,34147,
#Partially deleted in new
chr9	110322460	110337847	chr9:110322460-110337847	1	-	110323869	110337796	789624	4	1541,66,105,75,	0,3714,11755,15312,
#Partially deleted in new
chr9	110365250	110579880	chr9:110365250-110579880	1	-	110366538	110579543	789624	48	1310,94,96,96,171,177,174,64,156,226,2792,673,168,192,85,177,120,174,171,124,127,183,202,158,202,114,114,97,92,162,162,162,234,165,112,122,195,132,108,130,119,198,180,180,159,177,256,868,	0,4672,10117,12020,14096,20647,22034,24273,35603,39076,40909,45812,62340,63892,64669,65023,66664,67211,69085,69990,71129,78287,80586,81649,84808,86038,90339,92005,93220,93701,100614,103689,106113,106908,110953,114384,115991,117110,118335,124399,131564,133790,137787,147675,148697,180864,184598,213762,
#Partially deleted in new
chr9	110365255	110579738	chr9:110365255-110579738	3	-	110366538	110579543	789624	48	1305,94,96,96,171,177,174,64,156,226,2792,673,168,192,85,177,120,174,171,124,125,176,202,158,202,114,114,97,92,162,162,162,234,165,112,122,195,132,108,130,119,198,180,180,159,177,256,726,	0,4667,10112,12015,14091,20642,22029,24268,35598,39071,40904,45807,62335,63887,64664,65018,66659,67206,69080,69985,71124,78289,80581,81644,84803,86033,90334,92000,93215,93696,100609,103684,106108,106903,110948,114379,115986,117105,118330,124394,131559,133785,137782,147670,148692,180859,184593,213757,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	110369591	110369698	chr9:110369591-110369698	3	-	110369591	110369591	8553170	1	107,	0,
#Partially deleted in new
chr9	110376810	110379378	chr9:110376810-110379378	0	-	110376810	110376810	8553170	2	556,32,	0,2536,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr9	110442478	110550054	chr9:110442478-110550054	0	-	110442478	110442478	8553170	26	1242,202,158,202,114,114,97,92,162,162,162,234,165,112,122,195,132,108,130,119,198,180,180,159,177,206,	0,3358,4421,7580,8810,13111,14777,15992,16473,23386,26461,28885,29680,33725,37156,38763,39882,41107,47171,54336,56562,60559,70447,71469,103636,107370,
#Partially deleted in new
chr9	110475882	110579880	chr9:110475882-110579880	1	-	110476195	110579543	789624	14	433,122,195,132,108,130,119,198,180,180,159,177,256,868,	0,3752,5359,6478,7703,13767,20932,23158,27155,37043,38065,70232,73966,103130,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	110599474	110605219	chr9:110599474-110605219	3	+	110599474	110599474	8553170	3	54,71,510,	0,4943,5235,
#Partially deleted in new
chr9	110668770	110800998	chr9:110668770-110800998	3	+	110668904	110800988	789624	15	213,127,152,128,142,125,160,7,264,176,24,202,192,149,693,	0,13903,18346,26632,28554,65480,78870,93431,99049,107017,107861,116044,116756,118919,131535,
#Partially deleted in new
chr9	110668778	110801620	chr9:110668778-110801620	1	+	110668904	110800988	789624	14	205,127,152,128,142,125,160,7,264,176,202,192,149,1315,	0,13895,18338,26624,28546,65472,78862,93423,99041,107009,116036,116748,118911,131527,
#Partially deleted in new
chr9	110668858	110800998	chr9:110668858-110800998	1	+	110668904	110800988	789624	14	125,127,152,128,142,30,125,160,7,176,202,192,149,693,	0,13815,18258,26544,28466,59829,65392,78782,93343,106929,115956,116668,118831,131447,
#Partially deleted in new
chr9	110668858	110800998	chr9:110668858-110800998	1	+	110668904	110800988	789624	13	125,127,152,128,142,30,125,160,183,202,192,149,693,	0,13815,18258,26544,28466,59829,65392,78782,106922,115956,116668,118831,131447,
#Partially deleted in new
chr9	110687216	110706188	chr9:110687216-110706188	0	+	110687216	110706152	789624	4	52,128,142,113,	0,8186,10108,18859,
#Deleted in new
chr9	110727455	110727679	chr9:110727455-110727679	7	-	110727455	110727455	16724991	1	224,	0,
#Partially deleted in new
chr9	110728272	110768018	chr9:110728272-110768018	0	+	110728272	110728272	8553170	6	23,27,125,160,7,199,	0,418,5978,19368,33929,39547,
#Partially deleted in new
chr9	110775346	110788101	chr9:110775346-110788101	0	+	110775346	110775346	8553170	3	617,192,412,	0,10180,12343,
#Partially deleted in new
chr9	110873262	111038043	chr9:110873262-111038043	3	-	110875420	110972117	0	5	2460,748,148,78,203,	0,68158,98810,100218,164578,
#Partially deleted in new
chr9	110873777	110999466	chr9:110873777-110999466	1	-	110875420	110972117	0	5	1945,748,148,78,74,	0,67643,98295,99703,125615,
#Partially deleted in new
chr9	110874176	111038085	chr9:110874176-111038085	1	-	110875420	110972117	0	4	1546,748,148,245,	0,67244,97896,163664,
#Partially deleted in new
chr9	110874320	111036207	chr9:110874320-111036207	1	-	110875420	110942159	789624	6	1402,748,28,148,78,86,	0,67100,71053,97752,99160,161801,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	110903336	110903445	chr9:110903336-110903445	3	+	110903336	110903336	8553170	1	109,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	110934405	110934507	chr9:110934405-110934507	3	+	110934405	110934405	8553170	1	102,	0,
#Partially deleted in new
chr9	110941667	111038458	chr9:110941667-111038458	0	-	110941667	110972117	789624	4	501,148,78,292,	0,30405,31813,96499,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	111097324	111097413	chr9:111097324-111097413	3	-	111097324	111097324	8553170	1	89,	0,
#Partially deleted in new
chr9	111139245	111284836	chr9:111139245-111284836	3	-	111139245	111139245	8553170	3	374,153,217,	0,133567,145374,
#Deleted in new
chr9	111271155	111271214	chr9:111271155-111271214	3	-	111271155	111271155	5263520	1	59,	0,
#Partially deleted in new
chr9	111327482	111330183	chr9:111327482-111330183	3	-	111327482	111328433	789624	2	1000,78,	0,2623,
#Deleted in new
chr9	111327482	111328520	chr9:111327482-111328520	1	-	111327482	111328520	789624	1	1038,	0,
#Partially deleted in new
chr9	111360691	111484357	chr9:111360691-111484357	3	-	111362029	111484137	789624	49	1478,72,89,106,139,193,44,209,192,67,92,67,90,66,151,122,48,106,80,168,118,69,115,55,146,124,102,173,163,135,92,223,81,124,104,123,67,50,79,86,120,82,140,169,150,119,117,131,242,	0,2896,5547,5830,8343,9743,10030,10929,11737,12478,12623,13280,14421,15784,17888,22519,23830,24645,25685,28864,29292,31064,32076,32988,33468,36338,47879,49349,50288,51322,53203,53737,55580,57191,59325,61229,61442,62507,64726,65051,67350,69855,72541,76248,79680,81614,83686,90733,123424,
#Partially deleted in new
chr9	111360692	111484745	chr9:111360692-111484745	1	-	111362029	111484745	789624	51	1477,72,89,106,139,193,44,209,192,67,92,67,90,66,151,122,48,106,80,168,118,69,115,55,146,124,102,173,163,135,92,223,81,124,104,123,67,50,79,86,120,82,140,169,150,119,117,131,277,195,84,	0,2895,5546,5829,8342,9742,10029,10928,11736,12477,12622,13279,14420,15783,17887,22518,23829,24644,25684,28863,29291,31063,32075,32987,33467,36337,47878,49348,50287,51321,53202,53736,55579,57190,59324,61228,61441,62506,64725,65050,67349,69854,72540,76247,79679,81613,83685,90732,123292,123661,123969,
#Partially deleted in new
chr9	111361885	111371788	chr9:111361885-111371788	0	-	111362029	111371788	789624	4	168,193,44,168,	0,8549,8836,9735,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	111365553	111370604	chr9:111365553-111370604	0	-	111365553	111365553	8553170	4	774,106,139,170,	0,968,3481,4881,
#Partially deleted in new
chr9	111408570	111483679	chr9:111408570-111483679	0	-	111408570	111483543	789624	23	102,173,163,135,92,223,81,124,104,123,67,50,79,86,120,82,140,169,150,119,117,131,176,	0,1470,2409,3443,5324,5858,7701,9312,11446,13350,13563,14628,16847,17172,19471,21976,24662,28369,31801,33735,35807,42854,74933,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	111411643	111411742	chr9:111411643-111411742	7	-	111411643	111411643	16724991	1	99,	0,
#Partially deleted in new
chr9	111442310	111484057	chr9:111442310-111484057	0	-	111442310	111472918	789624	5	114,117,131,104,73,	0,2067,9114,30586,41674,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	111525158	111577844	chr9:111525158-111577844	1	+	111527395	111576414	0	6	104,540,89,127,93,1480,	0,2109,5716,8580,9102,51206,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	111525188	111539761	chr9:111525188-111539761	1	+	111527395	111539459	789624	6	74,540,89,127,93,316,	0,2079,5686,8550,9072,14257,
#Partially deleted in new
chr9	111525215	111528020	chr9:111525215-111528020	1	+	111527395	111527932	789624	2	47,753,	0,2052,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	111525232	111544432	chr9:111525232-111544432	3	+	111527395	111543170	0	6	30,540,89,127,93,2776,	0,2035,5642,8506,9028,16424,
#Partially deleted in new
chr9	111549721	111599835	chr9:111549721-111599835	1	-	111549772	111597422	0	10	78,119,109,156,118,168,57,46,116,233,	0,20369,25012,29074,33750,36276,43204,44500,47595,49881,
#Partially deleted in new
chr9	111562576	111599893	chr9:111562576-111599893	0	-	111564238	111597422	789624	11	655,106,119,109,156,118,168,57,46,116,291,	0,1580,7514,12157,16219,20895,23421,30349,31645,34740,37026,
#Partially deleted in new
chr9	111562966	111599407	chr9:111562966-111599407	1	-	111563120	111597422	0	10	265,119,109,156,118,168,57,46,116,69,	0,7124,11767,15829,20505,23031,29959,31255,34350,36372,
#Partially deleted in new
chr9	111562966	111599855	chr9:111562966-111599855	3	-	111563120	111597422	0	10	265,119,109,156,118,168,57,46,116,253,	0,7124,11767,15829,20505,23031,29959,31255,34350,36636,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	111562972	111597432	chr9:111562972-111597432	0	-	111589369	111597422	789624	10	1290,119,109,156,118,168,119,57,46,116,	0,7118,11761,15823,20499,23025,26291,29953,31249,34344,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	111574191	111575427	chr9:111574191-111575427	3	+	111574191	111574191	8553170	2	203,99,	0,1137,
#Partially deleted in new
chr9	111583551	111599695	chr9:111583551-111599695	0	-	111583551	111597422	789624	5	38,168,46,116,93,	0,2446,10670,13765,16051,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	111592297	111599816	chr9:111592297-111599816	0	-	111592297	111592297	8553170	4	685,46,116,214,	0,1924,5019,7305,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	111592366	111599407	chr9:111592366-111599407	0	-	111592366	111592366	8553170	4	616,46,116,69,	0,1855,4950,6972,
#Partially deleted in new
chr9	111592690	111597413	chr9:111592690-111597413	0	-	111592690	111592690	8553170	2	292,97,	0,4626,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	111603288	111631289	chr9:111603288-111631289	7	-	111603288	111603288	16724991	3	597,256,250,	0,5725,27751,
#Deleted in new
chr9	111609013	111609598	chr9:111609013-111609598	5	-	111609013	111609013	16724991	1	585,	0,
#Partially deleted in new
chr9	111631351	111654351	chr9:111631351-111654351	3	+	111631407	111653222	789624	4	392,153,471,1252,	0,15755,18101,21748,
#Partially deleted in new
chr9	111631385	111670229	chr9:111631385-111670229	3	+	111631407	111666940	789624	3	358,132,958,	0,35429,37886,
#Partially deleted in new
chr9	111661334	111670246	chr9:111661334-111670246	3	+	111661634	111666940	789624	3	381,132,978,	0,5480,7934,
#Partially deleted in new
chr9	111686172	111759533	chr9:111686172-111759533	1	-	111686769	111759288	789624	23	698,961,150,132,94,122,112,118,179,70,73,179,177,120,417,243,95,109,108,154,112,154,378,	0,5378,7626,8058,13781,15932,17708,19074,20395,21682,26927,28272,36236,37619,41460,52107,55303,60061,61919,70152,71911,72522,72983,
#Partially deleted in new
chr9	111686172	111759533	chr9:111686172-111759533	1	-	111686769	111759288	789624	24	698,961,150,132,94,122,112,118,179,70,73,179,105,177,120,417,243,95,109,108,154,112,154,378,	0,5378,7626,8058,13781,15932,17708,19074,20395,21682,26927,28272,32011,36236,37619,41460,52107,55303,60061,61919,70152,71911,72522,72983,
#Partially deleted in new
chr9	111686518	111781129	chr9:111686518-111781129	1	-	111686769	111780994	789624	25	352,961,150,132,94,122,112,118,179,70,73,179,105,177,120,417,243,95,109,108,154,112,154,185,200,	0,5032,7280,7712,13435,15586,17362,18728,20049,21336,26581,27926,31665,35890,37273,41114,51761,54957,59715,61573,69806,71565,72176,89272,94411,
#Partially deleted in new
chr9	111686572	111783493	chr9:111686572-111783493	3	-	111686769	111780994	789624	26	298,961,150,132,94,122,112,118,179,70,73,179,105,177,120,417,243,95,109,108,154,112,154,185,88,106,	0,4978,7226,7658,13381,15532,17308,18674,19995,21282,26527,27872,31611,35836,37219,41060,51707,54903,59661,61519,69752,71511,72122,89218,94357,96815,
#Partially deleted in new
chr9	111737868	111795008	chr9:111737868-111795008	1	-	111738229	111791418	789624	12	654,95,109,108,154,112,154,185,88,124,81,109,	0,3607,8365,10223,18456,20215,20826,37922,43061,48043,53505,57031,
#Deleted in new
chr9	111802979	111803435	chr9:111802979-111803435	7	+	111802979	111802979	16724991	2	238,175,	0,281,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	111839827	111839934	chr9:111839827-111839934	3	+	111839827	111839827	8553170	1	107,	0,
#Partially deleted in new
chr9	111896765	111935369	chr9:111896765-111935369	3	+	111897215	111932997	789624	9	548,142,103,102,113,179,87,190,2543,	0,17839,26083,28011,29618,32734,34505,35404,36061,
#Partially deleted in new
chr9	111897176	111914993	chr9:111897176-111914993	0	+	111897176	111897176	8553170	2	137,389,	0,17428,
#Partially deleted in new
chr9	111897200	111926426	chr9:111897200-111926426	0	+	111897200	111897200	8553170	6	113,142,78,103,102,43,	0,17404,18558,25648,27576,29183,
#Partially deleted in new
chr9	111897200	111929666	chr9:111897200-111929666	0	+	111897200	111897200	8553170	6	113,142,135,102,113,167,	0,17404,25616,27576,29183,32299,
#Partially deleted in new
chr9	111929248	111931308	chr9:111929248-111931308	0	+	111929248	111929248	8553170	2	430,38,	0,2022,
#Deleted in new
chr9	111932099	111932169	chr9:111932099-111932169	3	+	111932099	111932099	5263520	1	70,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	111996634	111996739	chr9:111996634-111996739	3	-	111996634	111996634	8553170	1	105,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	112032554	112037730	chr9:112032554-112037730	3	-	112032554	112032554	8553170	2	3440,1048,	0,4128,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	112033393	112036310	chr9:112033393-112036310	0	-	112033393	112033393	8553170	1	2917,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	112035860	112037115	chr9:112035860-112037115	0	-	112035860	112035860	8553170	2	134,465,	0,790,
#Partially deleted in new
chr9	112040784	112175185	chr9:112040784-112175185	0	-	112041900	112175185	789624	16	708,94,259,97,187,92,193,110,187,98,180,180,153,156,114,53,	0,1082,17643,22152,37753,39289,57685,61391,70869,71986,83472,101535,102686,108459,116715,134348,
#Partially deleted in new
chr9	112040784	112175297	chr9:112040784-112175297	1	-	112041900	112175235	789624	16	708,94,259,97,187,92,193,110,187,98,180,180,153,156,114,165,	0,1082,17643,22152,37753,39289,57685,61391,70869,71986,83472,101535,102686,108459,116715,134348,
#Partially deleted in new
chr9	112040784	112175408	chr9:112040784-112175408	3	-	112041491	112175235	789624	17	708,94,40,259,97,187,92,193,110,187,98,180,180,153,156,114,276,	0,1082,11614,17643,22152,37753,39289,57685,61391,70869,71986,83472,101535,102686,108459,116715,134348,
#Partially deleted in new
chr9	112041078	112175267	chr9:112041078-112175267	1	-	112041900	112175235	789624	18	414,94,65,40,259,97,187,92,193,110,187,98,180,180,153,156,114,135,	0,788,1022,11320,17349,21858,37459,38995,57391,61097,70575,71692,83178,101241,102392,108165,116421,134054,
#Partially deleted in new
chr9	112041082	112058471	chr9:112041082-112058471	0	-	112052255	112058471	789624	4	410,94,195,44,	0,784,11072,17345,
#Partially deleted in new
chr9	112080073	112104958	chr9:112080073-112104958	0	-	112080073	112080073	8553170	4	92,193,110,230,	0,18396,22102,24655,
#Partially deleted in new
chr9	112098581	112142466	chr9:112098581-112142466	0	-	112098581	112142466	789624	7	81,110,35,191,98,180,147,	0,3594,4547,13068,14189,25675,43738,
#Partially deleted in new
chr9	112102175	112112083	chr9:112102175-112112083	0	-	112102175	112102175	8553170	2	110,430,	0,9478,
#Partially deleted in new
chr9	112112791	112142588	chr9:112112791-112142588	0	-	112112791	112112791	8553170	3	77,180,269,	0,11465,29528,
#Partially deleted in new
chr9	112124295	112146176	chr9:112124295-112146176	0	-	112124295	112124295	8553170	4	141,180,153,198,	0,18024,19175,21683,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	112137796	112137900	chr9:112137796-112137900	3	+	112137796	112137796	8553170	1	104,	0,
#Partially deleted in new
chr9	112173521	112173971	chr9:112173521-112173971	7	-	112173521	112173521	16724991	1	450,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr9	112217715	112333664	chr9:112217715-112333664	1	-	112223850	112333477	789624	15	6268,78,217,93,34,140,78,175,111,165,147,170,85,34,195,	0,6417,9695,10664,13664,14383,17104,33213,34962,44719,50333,58128,80116,112725,115754,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr9	112217715	112333026	chr9:112217715-112333026	1	-	112223850	112332843	789624	14	6268,78,217,93,34,140,78,175,111,165,147,170,76,243,	0,6417,9695,10664,13664,14383,17104,33213,34962,44719,50333,58128,80125,115068,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr9	112218434	112333667	chr9:112218434-112333667	1	-	112223850	112297865	789624	14	5549,78,217,93,34,140,78,175,111,165,147,170,85,198,	0,5698,8976,9945,12945,13664,16385,32494,34243,44000,49614,57409,79397,115035,
#Partially deleted in new
chr9	112222244	112333625	chr9:112222244-112333625	3	-	112223850	112333477	789624	15	1739,78,217,93,34,140,78,175,111,165,147,170,76,34,156,	0,1888,5166,6135,9135,9854,12575,28684,30433,40190,45804,53599,75596,108196,111225,
#Partially deleted in new
chr9	112222660	112333578	chr9:112222660-112333578	1	-	112223850	112297834	789624	13	1323,78,217,93,34,140,78,175,111,165,147,85,109,	0,1472,4750,5719,8719,9438,12159,28268,30017,39774,45388,75171,110809,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	112242549	112242839	chr9:112242549-112242839	3	-	112242549	112242549	8553170	1	290,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	112252257	112252378	chr9:112252257-112252378	7	+	112252257	112252257	16724991	1	121,	0,
#Partially deleted in new
chr9	112262434	112333546	chr9:112262434-112333546	0	-	112262434	112262434	8553170	3	165,147,77,	0,5614,71035,
#Partially deleted in new
chr9	112262504	112333029	chr9:112262504-112333029	0	-	112262504	112332843	789624	5	95,147,170,76,246,	0,5544,13339,35336,70279,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	112272595	112272837	chr9:112272595-112272837	3	-	112272595	112272595	8553170	1	242,	0,
#Partially deleted in new
chr9	112275909	112333614	chr9:112275909-112333614	0	-	112275909	112333477	789624	4	104,85,34,145,	0,21922,54531,57560,
#Partially deleted in new
chr9	112280977	112281335	chr9:112280977-112281335	7	-	112280977	112280977	16724991	2	37,174,	0,184,
#Deleted in new
chr9	112362713	112363116	chr9:112362713-112363116	7	+	112362713	112362713	16724991	1	403,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	112379936	112472410	chr9:112379936-112472410	3	+	112380163	112470544	0	11	244,164,99,115,104,99,195,72,150,129,1979,	0,24058,25687,28970,36904,38923,58494,61762,74076,79512,90495,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	112380079	112472405	chr9:112380079-112472405	1	+	112380163	112470544	0	9	101,164,99,99,195,72,150,129,1974,	0,23915,25544,38780,58351,61619,73933,79369,90352,
#Partially deleted in new
chr9	112380103	112454162	chr9:112380103-112454162	0	+	112380103	112380103	8553170	8	77,99,115,104,99,195,72,150,	0,25520,28803,36737,38756,58327,61595,73909,
#Partially deleted in new
chr9	112380121	112459537	chr9:112380121-112459537	0	+	112380121	112380121	8553170	8	59,99,115,99,195,72,150,89,	0,25502,28785,38738,58309,61577,73891,79327,
#Partially deleted in new
chr9	112433815	112484626	chr9:112433815-112484626	3	-	112433815	112433815	8553170	3	298,115,171,	0,35907,50640,
#Partially deleted in new
chr9	112484441	112487204	chr9:112484441-112487204	1	-	112484441	112484441	8553170	3	183,152,226,	0,1948,2537,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	112484528	112486505	chr9:112484528-112486505	1	-	112484528	112484528	8553170	3	96,234,116,	0,401,1861,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	112484960	112486651	chr9:112484960-112486651	1	-	112484960	112484960	8553170	2	601,262,	0,1429,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	112486846	112669397	chr9:112486846-112669397	3	+	112574080	112660069	789624	4	272,1195,173,10135,	0,87210,158803,172416,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	112486967	112665309	chr9:112486967-112665309	1	+	112574080	112660069	789624	5	151,1195,84,173,6047,	0,87089,130903,158682,172295,
#Partially deleted in new
chr9	112487014	112619214	chr9:112487014-112619214	1	+	112574080	112618916	789624	3	104,1195,1344,	0,87042,130856,
#Deleted in new
chr9	112581778	112582590	chr9:112581778-112582590	7	-	112581778	112581778	16724991	3	103,45,112,	0,206,700,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	112683925	112718236	chr9:112683925-112718236	3	-	112687537	112716485	0	5	3708,91,103,81,250,	0,5601,10205,32535,34061,
#Partially deleted in new
chr9	112687116	112718149	chr9:112687116-112718149	1	-	112687537	112694168	789624	4	517,91,103,163,	0,2410,7014,30870,
#Partially deleted in new
chr9	112687144	112718107	chr9:112687144-112718107	1	-	112687503	112694168	789624	3	489,103,121,	0,6986,30842,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	112694033	112718117	chr9:112694033-112718117	0	-	112694033	112694033	8553170	3	200,81,131,	0,22427,23953,
#Deleted in new
chr9	112748901	112750456	chr9:112748901-112750456	3	-	112748901	112748901	8553170	2	369,51,	0,1504,
#Partially deleted in new
chr9	112750837	112874987	chr9:112750837-112874987	3	+	112751001	112868843	789624	9	320,192,111,159,196,200,87,153,6204,	0,53938,66867,79887,85376,87660,100021,113409,117946,
#Partially deleted in new
chr9	112838584	112866525	chr9:112838584-112866525	0	+	112838584	112866505	789624	4	113,87,153,41,	0,12274,25662,27900,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	112856707	112881671	chr9:112856707-112881671	0	+	112856707	112856707	8553170	6	96,153,123,98,3354,244,	0,7539,18461,19124,20411,24720,
#Partially deleted in new
chr9	112878919	112890913	chr9:112878919-112890913	3	-	112879761	112890681	789624	4	900,157,84,1361,	0,7540,8410,10633,
#Partially deleted in new
chr9	112879256	112890810	chr9:112879256-112890810	0	-	112887344	112890681	789624	4	563,157,84,1086,	0,7203,8073,10468,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	112885157	112885767	chr9:112885157-112885767	3	+	112885157	112885157	8553170	1	610,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	112957721	112969380	chr9:112957721-112969380	7	-	112957721	112957721	16724991	6	1450,102,111,91,120,41,	0,1628,2071,8928,11100,11618,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	112957742	112999091	chr9:112957742-112999091	4	-	112957742	112957742	16724991	8	294,46,102,111,91,120,41,971,	0,1383,1607,2050,8907,11079,11597,40378,
#Partially deleted in new
chr9	112959133	112962261	chr9:112959133-112962261	7	-	112959133	112959133	16724991	6	38,102,111,78,141,96,	0,216,659,1751,2540,3032,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	112973149	113012195	chr9:112973149-113012195	4	-	112973149	112973149	16724991	6	610,1018,150,80,87,46,	0,24971,26515,28844,37991,39000,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	112997119	113050043	chr9:112997119-113050043	3	-	112997119	112998259	789624	2	2018,33,	0,52891,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	112997119	113012227	chr9:112997119-113012227	5	-	112997119	112997119	16724991	5	2019,150,80,87,78,	0,2545,4874,14021,15030,
#Deleted in new
chr9	112997119	112998259	chr9:112997119-112998259	5	-	112997119	112997119	16724991	1	1140,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	113038379	113056716	chr9:113038379-113056716	3	-	113042724	113056688	789624	4	5889,135,82,160,	0,10982,11411,18177,
#Partially deleted in new
chr9	113042240	113056759	chr9:113042240-113056759	1	-	113042724	113056688	789624	4	2028,135,85,203,	0,7121,7550,14316,
#Partially deleted in new
chr9	113042693	113056688	chr9:113042693-113056688	1	-	113042724	113056688	789624	4	1575,135,127,132,	0,6668,7097,13863,
#Deleted in new
chr9	113060085	113060507	chr9:113060085-113060507	7	-	113060085	113060085	16724991	1	422,	0,
#Deleted in new
chr9	113065534	113065956	chr9:113065534-113065956	7	-	113065534	113065534	16724991	1	422,	0,
#Deleted in new
chr9	113070982	113071404	chr9:113070982-113071404	7	-	113070982	113070982	16724991	1	422,	0,
#Deleted in new
chr9	113076428	113076850	chr9:113076428-113076850	7	-	113076428	113076428	16724991	1	422,	0,
#Deleted in new
chr9	113081870	113082292	chr9:113081870-113082292	7	-	113081870	113081870	16724991	1	422,	0,
#Deleted in new
chr9	113087316	113087738	chr9:113087316-113087738	7	-	113087316	113087316	16724991	1	422,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	113103337	113111473	chr9:113103337-113111473	0	-	113103337	113103337	8553170	2	6816,564,	0,7572,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	113104722	113111500	chr9:113104722-113111500	3	-	113104722	113104722	789624	3	5431,107,91,	0,6187,6687,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	113113072	113119928	chr9:113113072-113119928	0	+	113113072	113113072	8553170	2	591,5509,	0,1347,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	113113072	113119846	chr9:113113072-113119846	3	+	113113072	113113072	789624	3	91,107,5427,	0,484,1347,
#Partially deleted in new
chr9	113150941	113164137	chr9:113150941-113164137	3	+	113151074	113162917	789624	4	139,67,190,1389,	0,6785,10567,11807,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	113150975	113152316	chr9:113150975-113152316	0	+	113150975	113150975	8553170	2	105,666,	0,675,
#Partially deleted in new
chr9	113151029	113164137	chr9:113151029-113164137	0	+	113151074	113161604	789624	5	51,67,53,190,1389,	0,6697,7014,10479,11719,
#Partially deleted in new
chr9	113161005	113221318	chr9:113161005-113221318	0	-	113166077	113221318	789624	28	5150,97,719,108,126,153,156,137,172,103,95,108,110,115,107,103,108,58,143,147,69,150,99,75,70,85,116,128,	0,7454,8218,9516,10575,12447,13422,15531,17624,21760,22745,23286,23689,25243,26787,27383,29465,32486,33021,35926,37849,38808,41525,41955,45503,46206,50471,60185,
#Partially deleted in new
chr9	113165519	113221361	chr9:113165519-113221361	3	-	113166077	113221243	789624	28	636,97,719,108,126,153,156,137,172,103,95,108,110,115,107,103,108,58,143,147,69,150,99,75,70,85,116,171,	0,2940,3704,5002,6061,7933,8908,11017,13110,17246,18231,18772,19175,20729,22273,22869,24951,27972,28507,31412,33335,34294,37011,37441,40989,41692,45957,55671,
#Deleted in new
chr9	113184291	113188561	chr9:113184291-113188561	0	-	113184291	113184291	8553170	5	108,110,115,107,173,	0,403,1957,3501,4097,
#Partially deleted in new
chr9	113186435	113221318	chr9:113186435-113221318	0	-	113187756	113221318	789624	14	1464,103,108,58,143,147,69,150,99,75,70,85,116,128,	0,1953,4035,7056,7591,10496,12419,13378,16095,16525,20073,20776,25041,34755,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	113206010	113207296	chr9:113206010-113207296	0	-	113206010	113206010	8553170	2	568,85,	0,1201,
#Partially deleted in new
chr9	113206926	113221279	chr9:113206926-113221279	0	-	113206926	113206926	8553170	3	370,116,89,	0,4550,14264,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	113221561	113264492	chr9:113221561-113264492	3	+	113256148	113260473	0	5	117,164,73,169,4221,	0,34552,35551,37132,38710,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	113221586	113227660	chr9:113221586-113227660	0	+	113221586	113221586	8553170	2	92,383,	0,5691,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	113255834	113275549	chr9:113255834-113275549	0	-	113255834	113255834	8553170	5	209,94,122,110,168,	0,620,16592,17494,19547,
#Partially deleted in new
chr9	113267007	113275589	chr9:113267007-113275589	3	-	113267262	113272507	0	4	432,122,110,208,	0,5419,6321,8374,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr9	113275342	113292905	chr9:113275342-113292905	1	+	113275743	113291660	0	14	428,178,187,88,80,94,95,59,124,90,123,108,119,1439,	0,1205,3602,7303,7789,8046,8952,10889,11362,12832,15123,15357,15555,16124,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr9	113275641	113292776	chr9:113275641-113292776	3	+	113275743	113291660	0	14	129,181,187,88,80,94,95,59,124,90,123,108,119,1310,	0,903,3303,7004,7490,7747,8653,10590,11063,12533,14824,15058,15256,15825,
#Partially deleted in new
chr9	113279095	113283176	chr9:113279095-113283176	0	+	113279095	113279095	8553170	2	36,531,	0,3550,
#Deleted in new
chr9	113297092	113299196	chr9:113297092-113299196	1	-	113297605	113298184	789624	2	1129,237,	0,1867,
#Deleted in new
chr9	113297442	113298865	chr9:113297442-113298865	1	-	113297605	113298184	789624	2	779,70,	0,1353,
#Partially deleted in new
chr9	113297453	113303271	chr9:113297453-113303271	3	-	113297605	113298184	789624	4	768,204,642,216,	0,2118,4218,5602,
#Deleted in new
chr9	113297453	113299765	chr9:113297453-113299765	1	-	113297605	113298184	789624	1	2312,	0,
#Partially deleted in new
chr9	113299646	113303115	chr9:113299646-113303115	0	-	113299646	113299646	8553170	5	129,217,45,119,60,	0,2025,2335,2548,3409,
#Partially deleted in new
chr9	113299647	113303274	chr9:113299647-113303274	0	-	113299647	113299647	8553170	4	128,80,119,219,	0,2024,2547,3408,
#Deleted in new
chr9	113302100	113303376	chr9:113302100-113303376	0	-	113302100	113302100	8553170	2	213,321,	0,955,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	113313221	113340269	chr9:113313221-113340269	1	-	113316748	113332022	789624	11	3688,163,142,68,101,145,75,130,144,153,53,	0,5253,7135,8289,9589,9789,15659,17762,18685,23066,26995,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	113313221	113340282	chr9:113313221-113340282	1	-	113316748	113332022	789624	11	3688,163,142,68,101,145,75,133,144,153,66,	0,5253,7135,8289,9589,9789,15659,17762,18685,23066,26995,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	113313222	113340272	chr9:113313222-113340272	3	-	113316748	113332022	789624	13	687,218,1019,163,142,68,101,145,75,130,144,153,56,	0,1288,2668,5252,7134,8288,9588,9788,15658,17761,18684,23065,26994,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	113315670	113340256	chr9:113315670-113340256	0	-	113315670	113315670	8553170	11	1239,163,142,107,101,145,75,133,73,153,40,	0,2804,4686,5801,7140,7340,13210,15313,16307,20617,24546,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	113315683	113340254	chr9:113315683-113340254	0	-	113328915	113332022	789624	10	1226,163,142,68,101,145,75,144,153,38,	0,2791,4673,5827,7127,7327,13197,16223,20604,24533,
#Partially deleted in new
chr9	113321521	113340298	chr9:113321521-113340298	0	-	113321521	113332022	789624	6	57,101,145,75,73,82,	0,1289,1489,7359,10456,18695,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	113349540	113371233	chr9:113349540-113371233	3	+	113349579	113370142	789624	6	240,99,231,26,125,1618,	0,4699,10966,12828,18718,20075,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	113349541	113371233	chr9:113349541-113371233	0	+	113349541	113349541	8553170	5	239,99,231,26,1618,	0,4698,10965,12827,20074,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	113373418	113376175	chr9:113373418-113376175	1	-	113373598	113374354	0	2	1111,723,	0,2034,
#Partially deleted in new
chr9	113373418	113376999	chr9:113373418-113376999	3	-	113373598	113374354	0	3	1111,115,271,	0,2034,3310,
#Partially deleted in new
chr9	113373887	113376925	chr9:113373887-113376925	0	-	113373887	113373887	8553170	3	642,74,197,	0,1565,2841,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	113386316	113401333	chr9:113386316-113401333	3	-	113388299	113393559	0	12	2045,130,87,88,56,89,84,136,97,51,188,122,	0,2660,3121,3282,3456,4088,4276,4481,5210,5802,7130,14895,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	113386318	113401243	chr9:113386318-113401243	0	-	113386318	113386318	8553170	12	2043,130,87,88,56,89,84,136,97,217,188,32,	0,2658,3119,3280,3454,4086,4274,4479,5208,5800,7128,14893,
#Partially deleted in new
chr9	113389790	113401258	chr9:113389790-113401258	0	-	113389790	113389790	8553170	7	38,89,341,97,51,188,47,	0,614,802,1736,2328,3656,11421,
#Partially deleted in new
chr9	113390627	113401284	chr9:113390627-113401284	0	-	113390627	113390627	8553170	3	306,184,73,	0,2819,10584,
#Partially deleted in new
chr9	113390859	113401290	chr9:113390859-113401290	0	-	113390859	113393586	789624	6	74,97,51,188,47,79,	0,667,1259,2587,7218,10352,
#Partially deleted in new
chr9	113390905	113392555	chr9:113390905-113392555	0	-	113390905	113390905	8553170	3	28,97,437,	0,621,1213,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	113392131	113397402	chr9:113392131-113397402	0	-	113392131	113393586	789624	3	38,188,357,	0,1315,4914,
#Partially deleted in new
chr9	113393160	113401284	chr9:113393160-113401284	0	-	113393160	113393160	8553170	2	474,73,	0,8051,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	113393544	113396875	chr9:113393544-113396875	0	-	113393544	113393586	789624	2	90,613,	0,2718,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	113407234	113410382	chr9:113407234-113410382	1	-	113408810	113410293	789624	4	1749,119,86,155,	0,2375,2820,2993,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	113407234	113410672	chr9:113407234-113410672	3	-	113408810	113410293	789624	5	1749,119,86,181,56,	0,2375,2820,2993,3382,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	113407234	113410343	chr9:113407234-113410343	0	-	113407234	113407234	8553170	3	1749,531,116,	0,2375,2993,
#Partially deleted in new
chr9	113408943	113410350	chr9:113408943-113410350	0	-	113408943	113408943	8553170	3	40,119,296,	0,666,1111,
#Partially deleted in new
chr9	113410053	113421151	chr9:113410053-113421151	0	+	113410053	113410053	8553170	5	104,200,136,58,49,	0,3391,3705,9054,11049,
#Partially deleted in new
chr9	113410685	113429684	chr9:113410685-113429684	3	+	113413493	113429386	789624	14	316,200,136,58,101,37,173,151,58,77,88,77,64,513,	0,2759,3073,8422,10417,11863,12640,13480,14333,14658,14957,17461,18214,18486,
#Partially deleted in new
chr9	113410741	113429684	chr9:113410741-113429684	1	+	113413493	113429386	789624	14	397,200,136,58,101,37,173,151,58,77,88,77,64,513,	0,2703,3017,8366,10361,11807,12584,13424,14277,14602,14901,17405,18158,18430,
#Partially deleted in new
chr9	113463728	113597723	chr9:113463728-113597723	0	+	113463728	113463728	8553170	23	153,51,165,95,69,61,91,56,82,106,352,40,197,84,112,44,123,978,65,102,62,167,956,	0,15762,19224,20409,21896,32057,33585,34296,41713,42659,43558,44812,50729,53812,59201,65492,73067,119721,127604,130701,131190,131870,133039,
#Partially deleted in new
chr9	113463731	113542089	chr9:113463731-113542089	1	+	113463802	113541427	0	18	150,51,59,95,69,61,91,56,82,106,352,40,197,84,112,44,123,770,	0,15759,19327,20406,21893,32054,33582,34293,41710,42656,43555,44809,50726,53809,59198,65489,73064,77588,
#Partially deleted in new
chr9	113478870	113485691	chr9:113478870-113485691	0	+	113478870	113478870	8553170	4	671,59,95,67,	0,4188,5267,6754,
#Partially deleted in new
chr9	113479304	113495838	chr9:113479304-113495838	0	+	113479304	113479304	8553170	6	67,51,59,95,69,53,	0,186,3754,4833,6320,16481,
#Partially deleted in new
chr9	113501370	113507509	chr9:113501370-113507509	0	+	113501370	113501370	8553170	5	64,75,82,106,223,	0,3647,4071,5017,5916,
#Partially deleted in new
chr9	113501426	113597738	chr9:113501426-113597738	1	+	113501576	113596953	0	16	204,82,106,352,40,197,84,112,44,123,978,65,102,62,167,971,	0,4015,4961,5860,7114,13031,16114,21503,27794,35369,82023,89906,93003,93492,94172,95341,
#Partially deleted in new
chr9	113501426	113597743	chr9:113501426-113597743	1	+	113501576	113596953	0	15	204,82,106,352,40,197,84,112,44,123,65,102,62,167,976,	0,4015,4961,5860,7114,13031,16114,21503,27794,35369,89906,93003,93492,94172,95341,
#Deleted in new
chr9	113503354	113507524	chr9:113503354-113507524	0	+	113503354	113503354	8553170	5	57,80,82,106,238,	0,1658,2087,3033,3932,
#Partially deleted in new
chr9	113505261	113542091	chr9:113505261-113542091	1	+	113507323	113541427	789624	10	262,106,352,40,197,84,112,44,123,772,	0,1126,2025,3279,9196,12279,17668,23959,31534,36058,
#Partially deleted in new
chr9	113517269	113583690	chr9:113517269-113583690	0	+	113517269	113583690	789624	6	37,84,112,44,123,241,	0,271,5660,11951,19526,66180,
#Partially deleted in new
chr9	113517367	113536918	chr9:113517367-113536918	0	+	113517367	113517367	8553170	4	257,112,44,123,	0,5562,11853,19428,
#Partially deleted in new
chr9	113522255	113536918	chr9:113522255-113536918	0	+	113522255	113522255	8553170	4	85,112,44,123,	0,674,6965,14540,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	113522482	113536918	chr9:113522482-113536918	0	+	113522482	113522482	8553170	4	178,112,44,123,	0,447,6738,14313,
#Partially deleted in new
chr9	113536503	113597737	chr9:113536503-113597737	1	+	113583449	113596953	0	7	415,978,65,102,62,167,970,	0,46946,54829,57926,58415,59095,60264,
#Partially deleted in new
chr9	113536610	113541594	chr9:113536610-113541594	0	+	113536610	113536610	8553170	2	308,275,	0,4709,
#Partially deleted in new
chr9	113564953	113597743	chr9:113564953-113597743	1	+	113594439	113596953	789624	5	407,102,62,167,976,	0,29476,29965,30645,31814,
#Partially deleted in new
chr9	113565056	113582222	chr9:113565056-113582222	0	+	113565056	113565056	8553170	3	304,216,151,	0,458,17015,
#Partially deleted in new
chr9	113565056	113582242	chr9:113565056-113582242	0	+	113565056	113565056	8553170	2	304,226,	0,16960,
#Partially deleted in new
chr9	113565072	113595745	chr9:113565072-113595745	0	+	113565072	113565072	8553170	4	288,102,62,147,	0,29357,29846,30526,
#Partially deleted in new
chr9	113565075	113591794	chr9:113565075-113591794	0	+	113565075	113565075	8553170	3	285,978,462,	0,18374,26257,
#Partially deleted in new
chr9	113570189	113590019	chr9:113570189-113590019	3	-	113570189	113570189	8553170	3	155,116,124,	0,18911,19706,
#Partially deleted in new
chr9	113580659	113597738	chr9:113580659-113597738	1	+	113583449	113596953	0	8	346,171,978,65,102,62,167,971,	0,1412,2790,10673,13770,14259,14939,16108,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	113580892	113593003	chr9:113580892-113593003	0	+	113580892	113580892	8553170	3	1350,978,1671,	0,2557,10440,
#Partially deleted in new
chr9	113580927	113583671	chr9:113580927-113583671	0	+	113583449	113583671	789624	4	78,100,171,222,	0,631,1144,2522,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	113581635	113597737	chr9:113581635-113597737	0	+	113581635	113581635	8553170	6	2792,65,102,62,167,970,	0,9697,12794,13283,13963,15132,
#Partially deleted in new
chr9	113582071	113594980	chr9:113582071-113594980	0	+	113583449	113594980	789624	6	171,267,246,65,102,62,	0,1378,2110,9261,12358,12847,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	113593485	113597738	chr9:113593485-113597738	1	+	113593919	113596953	0	5	853,102,62,167,971,	0,944,1433,2113,3282,
#Partially deleted in new
chr9	113593919	113597743	chr9:113593919-113597743	1	+	113593919	113596953	0	5	419,102,62,167,976,	0,510,999,1679,2848,
#Partially deleted in new
chr9	113594128	113597729	chr9:113594128-113597729	1	+	113594276	113596953	789624	5	210,102,62,167,962,	0,301,790,1470,2639,
#Deleted in new
chr9	113594143	113595094	chr9:113594143-113595094	0	+	113594143	113594143	8553170	2	388,176,	0,775,
#Partially deleted in new
chr9	113595471	113597738	chr9:113595471-113597738	0	+	113595471	113595471	8553170	2	294,971,	0,1296,
#Deleted in new
chr9	113614588	113617375	chr9:113614588-113617375	3	-	113614588	113614588	8553170	1	2787,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	113619227	113622634	chr9:113619227-113622634	3	+	113619227	113619227	8553170	2	184,2859,	0,548,
#Partially deleted in new
chr9	113650955	113682855	chr9:113650955-113682855	3	+	113650955	113650955	8553170	3	209,64,950,	0,1061,30950,
#Partially deleted in new
chr9	113758993	113759419	chr9:113758993-113759419	7	-	113758993	113758993	16724991	1	426,	0,
#Deleted in new
chr9	113850686	113851632	chr9:113850686-113851632	7	-	113850686	113850686	16724991	1	946,	0,
#Partially deleted in new
chr9	113876281	114056591	chr9:113876281-114056591	1	+	113876380	114050167	789624	14	132,44,260,78,39,90,36,78,60,90,81,78,102,7941,	0,92835,112039,125714,126342,131068,132062,132195,139831,140413,156366,160018,171611,172369,
#Partially deleted in new
chr9	113876281	114050221	chr9:113876281-114050221	3	+	113876380	114050167	789624	15	132,44,260,96,78,39,90,36,78,90,240,84,78,102,1571,	0,92835,112039,121977,125714,126342,131068,132062,132195,140413,152451,156363,160018,171611,172369,
#Partially deleted in new
chr9	113876281	114056591	chr9:113876281-114056591	1	+	113876380	114050167	789624	14	132,44,260,78,39,90,36,78,90,240,81,78,102,7941,	0,92835,112039,125714,126342,131068,132062,132195,140413,152451,156366,160018,171611,172369,
#Partially deleted in new
chr9	113876349	114032724	chr9:113876349-114032724	0	+	113876380	114032724	789624	12	64,44,260,78,39,90,36,78,60,90,240,77,	0,92767,111971,125646,126274,131000,131994,132127,139763,140345,152383,156298,
#Partially deleted in new
chr9	113876349	114032723	chr9:113876349-114032723	0	+	113876380	114032723	789624	11	64,44,260,78,39,90,78,60,90,63,76,	0,92767,111971,125646,126274,131000,132127,139763,140345,152560,156298,
#Partially deleted in new
chr9	113876381	114030882	chr9:113876381-114030882	0	+	113876381	113876381	8553170	12	32,44,260,78,39,90,36,78,60,90,240,79,	0,92735,111939,125614,126242,130968,131962,132095,139731,140313,152351,154422,
#Partially deleted in new
chr9	114027920	114050221	chr9:114027920-114050221	0	+	114027920	114027920	8553170	6	1052,84,45,78,102,1571,	0,4724,7270,8379,19972,20730,
#Partially deleted in new
chr9	114060126	114078472	chr9:114060126-114078472	3	-	114060238	114078209	0	10	144,174,168,82,47,102,117,77,143,380,	0,798,1297,2550,9572,12798,13909,14833,16471,17966,
#Partially deleted in new
chr9	114060909	114077608	chr9:114060909-114077608	0	-	114060909	114060909	8553170	8	682,82,47,102,117,77,143,106,	0,1767,8789,12015,13126,14050,15688,16593,
#Partially deleted in new
chr9	114060991	114074969	chr9:114060991-114074969	0	-	114060991	114074969	789624	7	86,135,82,47,102,117,10,	0,465,1685,8707,11933,13044,13968,
#Partially deleted in new
chr9	114061499	114078328	chr9:114061499-114078328	0	-	114069745	114078209	789624	8	92,82,208,102,117,77,143,236,	0,1177,8199,11425,12536,13460,15098,16593,
#Partially deleted in new
chr9	114086125	114093917	chr9:114086125-114093917	0	-	114086156	114093917	789624	3	99,269,32,	0,7103,7760,
#Partially deleted in new
chr9	114091637	114099227	chr9:114091637-114099227	0	-	114091637	114091637	8553170	18	363,119,101,154,105,91,87,91,103,105,119,157,92,136,223,315,79,124,	0,695,904,1113,1591,1769,2248,2543,2715,3385,3576,4413,4749,5663,5881,6477,7297,7466,
#Partially deleted in new
chr9	114091637	114099291	chr9:114091637-114099291	3	-	114091860	114099276	789624	19	363,119,101,105,91,87,91,103,105,119,157,92,136,135,76,128,79,66,41,	0,695,904,1591,1769,2248,2543,2715,3385,3576,4413,4749,5663,5969,6477,6664,7297,7466,7613,
#Partially deleted in new
chr9	114091637	114099057	chr9:114091637-114099057	0	-	114091637	114091637	8553170	16	363,119,101,105,91,87,91,103,105,119,157,92,136,135,76,123,	0,695,904,1591,1769,2248,2543,2715,3385,3576,4413,4749,5663,5969,6477,7297,
#Deleted in new
chr9	114091637	114092451	chr9:114091637-114092451	0	-	114091826	114092451	789624	3	363,20,119,	0,517,695,
#Partially deleted in new
chr9	114091639	114099057	chr9:114091639-114099057	1	-	114091860	114097702	789624	16	361,119,101,105,91,87,91,103,105,119,157,92,136,135,76,123,	0,693,902,1589,1767,2246,2541,2713,3383,3574,4411,4747,5661,5967,6475,7295,
#Partially deleted in new
chr9	114091639	114099276	chr9:114091639-114099276	1	-	114091860	114099276	789624	19	361,119,101,105,91,87,91,103,105,119,157,92,136,135,76,113,79,66,26,	0,693,902,1589,1767,2246,2541,2713,3383,3574,4411,4747,5661,5967,6475,6662,7295,7464,7611,
#Deleted in new
chr9	114093305	114097716	chr9:114093305-114097716	0	-	114096442	114097716	789624	8	28,91,87,103,105,119,92,110,	0,101,580,1047,1717,1908,3081,4301,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	114097399	114097936	chr9:114097399-114097936	0	-	114097399	114097399	8553170	2	37,330,	0,207,
#Partially deleted in new
chr9	114155559	114312511	chr9:114155559-114312511	3	+	114155950	114310695	789624	61	453,71,1775,54,54,54,54,45,54,45,54,45,54,45,54,45,54,54,54,54,54,45,54,45,54,54,54,54,54,45,45,54,54,54,54,54,108,54,108,54,54,57,54,54,54,54,108,108,108,54,63,54,36,18,36,27,66,169,110,219,1963,	0,7155,12129,22731,27462,38844,40399,49542,50199,50692,54115,55422,64231,66663,75519,76262,80039,81421,82102,84660,84874,86627,87947,90306,95055,97033,97319,102981,108795,109364,109506,109862,111005,111944,113681,115168,120101,126717,126897,128149,129164,132895,133142,133354,133682,134498,134664,135250,136543,144510,145065,145512,145724,145885,146122,146522,149048,150960,152109,153700,154989,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	114167714	114218579	chr9:114167714-114218579	0	+	114167714	114217859	789624	8	1749,54,54,54,45,54,45,810,	0,10576,15307,28244,38537,41960,43267,50055,
#Partially deleted in new
chr9	114168607	114311548	chr9:114168607-114311548	0	+	114168607	114235603	789624	58	856,54,54,54,45,54,45,54,45,54,45,54,37,54,54,54,54,54,45,54,45,54,61,54,54,54,45,45,54,54,54,54,54,108,54,108,54,54,57,54,54,54,54,108,108,108,54,63,54,36,18,36,27,66,169,110,219,1000,	0,9683,14414,27351,36494,37151,37644,41067,42374,51183,53615,62471,63214,66991,68373,69054,71612,71826,73579,74899,77258,82007,83985,84271,89933,95747,96316,96458,96814,97957,98896,100633,102120,107053,113669,113849,115101,116116,119847,120094,120306,120634,121450,121616,122202,123495,131462,132017,132464,132676,132837,133074,133474,136000,137912,139061,140652,141941,
#Deleted in new
chr9	114209433	114209529	chr9:114209433-114209529	3	+	114209433	114209433	5263520	1	96,	0,
#Partially deleted in new
chr9	114240219	114246121	chr9:114240219-114246121	0	+	114240219	114240219	8553170	5	54,54,45,54,256,	0,214,1967,3287,5646,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	114268806	114274230	chr9:114268806-114274230	0	+	114268806	114268806	8553170	2	488,3503,	0,1921,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	114300361	114301542	chr9:114300361-114301542	0	+	114300361	114300361	8553170	4	326,54,36,98,	0,710,922,1083,
#Deleted in new
chr9	114306212	114309339	chr9:114306212-114309339	0	+	114306212	114306212	8553170	3	476,110,80,	0,1456,3047,
#Deleted in new
chr9	114307031	114311528	chr9:114307031-114311528	0	+	114307031	114307031	8553170	3	747,219,980,	0,2228,3517,
#Partially deleted in new
chr9	114323055	114326475	chr9:114323055-114326475	3	+	114323133	114326357	789624	6	192,143,71,108,104,184,	0,607,962,1734,1993,3236,
#Partially deleted in new
chr9	114323765	114325251	chr9:114323765-114325251	0	+	114323765	114323765	8553170	4	40,71,108,203,	0,252,1024,1283,
#Partially deleted in new
chr9	114329868	114333252	chr9:114329868-114333252	3	+	114329904	114333134	0	6	150,143,71,108,104,184,	0,565,923,1698,1957,3200,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr9	114334155	114394405	chr9:114334155-114394405	3	-	114337053	114381333	789624	22	3151,193,117,96,147,116,177,163,212,107,247,201,167,208,128,60,155,157,75,1067,387,49,	0,7377,7853,9552,11707,12513,13568,16703,21769,22707,23765,25438,25740,27548,28250,30404,33387,34283,39937,42310,46904,60201,
#Partially deleted in new
chr9	114336126	114387963	chr9:114336126-114387963	1	-	114337053	114381333	789624	22	1180,193,117,96,147,116,177,163,212,107,247,201,167,208,128,60,155,157,75,1067,387,104,	0,5406,5882,7581,9736,10542,11597,14732,19798,20736,21794,23467,23769,25577,26279,28433,31416,32312,37966,40339,44933,51733,
#Partially deleted in new
chr9	114336127	114348999	chr9:114336127-114348999	1	-	114337053	114348942	789624	8	1179,193,117,96,147,116,177,113,	0,5405,5881,7580,9735,10541,11596,12759,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	114336130	114346774	chr9:114336130-114346774	0	-	114336130	114336130	8553170	5	1176,193,117,2302,106,	0,5402,5878,7577,10538,
#Partially deleted in new
chr9	114336164	114376964	chr9:114336164-114376964	1	-	114337053	114367650	789624	21	1142,193,117,96,147,116,177,163,212,107,247,201,167,208,128,60,155,47,157,75,499,	0,5368,5844,7543,9698,10504,11559,14694,19760,20698,21756,23429,23731,25539,26241,28395,31378,32035,32274,37928,40301,
#Partially deleted in new
chr9	114336164	114377635	chr9:114336164-114377635	1	-	114337053	114377563	789624	20	1142,193,117,96,147,116,177,163,212,107,247,201,167,208,128,60,155,157,75,1170,	0,5368,5844,7543,9698,10504,11559,14694,19760,20698,21756,23429,23731,25539,26241,28395,31378,32274,37928,40301,
#Deleted in new
chr9	114347772	114348999	chr9:114347772-114348999	0	-	114347772	114347772	8553170	2	128,113,	0,1114,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	114356125	114358337	chr9:114356125-114358337	0	-	114356125	114356125	8553170	3	11,107,417,	0,737,1795,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	114359086	114388081	chr9:114359086-114388081	1	-	114359589	114381333	789624	11	708,167,208,128,60,155,157,75,1067,387,222,	0,809,2617,3319,5473,8456,9352,15006,17379,21973,28773,
#Deleted in new
chr9	114396723	114398503	chr9:114396723-114398503	3	-	114396723	114396723	8553170	2	109,64,	0,1716,
#Partially deleted in new
chr9	114402079	114503173	chr9:114402079-114503173	1	-	114402753	114426227	0	12	857,123,182,538,72,210,213,37,203,126,219,67,	0,1137,1816,4275,5867,21234,22254,22908,24131,64187,76473,101027,
#Partially deleted in new
chr9	114402080	114504970	chr9:114402080-114504970	3	-	114402753	114504801	0	12	856,123,182,538,72,210,213,37,203,126,219,787,	0,1136,1815,4274,5866,21233,22253,22907,24130,64186,76472,102103,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	114402080	114426071	chr9:114402080-114426071	1	-	114402753	114425137	0	8	856,123,182,538,72,210,213,1084,	0,1136,1815,4274,5866,21233,22253,22907,
#Partially deleted in new
chr9	114478320	114505450	chr9:114478320-114505450	1	-	114478351	114504801	0	2	451,1267,	0,25863,
#Deleted in new
chr9	114491563	114491741	chr9:114491563-114491741	7	+	114491563	114491563	16724991	1	178,	0,
#Deleted in new
chr9	114503550	114504339	chr9:114503550-114504339	0	-	114503550	114503550	8553170	2	149,156,	0,633,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	114572900	114573371	chr9:114572900-114573371	7	+	114572900	114572900	16724991	1	471,	0,
#Partially deleted in new
chr9	114587745	114598373	chr9:114587745-114598373	3	+	114587838	114597743	789624	3	175,101,804,	0,4806,9824,
#Partially deleted in new
chr9	114587776	114592679	chr9:114587776-114592679	0	+	114587776	114587776	8553170	2	342,128,	0,4775,
#Partially deleted in new
chr9	114611205	114644161	chr9:114611205-114644161	3	+	114617195	114643313	789624	9	359,184,110,108,150,111,81,183,1028,	0,5912,13144,15693,16895,22562,25784,27338,31928,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	114611205	114646422	chr9:114611205-114646422	1	+	114617195	114643313	789624	9	359,184,110,111,150,111,81,183,3289,	0,5912,13144,15690,16895,22562,25784,27338,31928,
#Partially deleted in new
chr9	114611457	114628225	chr9:114611457-114628225	0	+	114611457	114611457	8553170	5	107,184,324,108,125,	0,5660,12678,15441,16643,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	114615454	114615568	chr9:114615454-114615568	3	-	114615454	114615454	8553170	1	114,	0,
#Deleted in new
chr9	114643266	114644704	chr9:114643266-114644704	0	+	114643266	114643266	8553170	2	133,638,	0,800,
#Partially deleted in new
chr9	114656303	114662374	chr9:114656303-114662374	0	-	114656303	114656303	8553170	2	304,100,	0,5971,
#Partially deleted in new
chr9	114656303	114657812	chr9:114656303-114657812	3	-	114656528	114657774	789624	2	329,147,	0,1362,
#Partially deleted in new
chr9	114666433	114682066	chr9:114666433-114682066	3	-	114666642	114671723	789624	5	313,132,123,108,32,	0,1772,4949,5286,15601,
#Partially deleted in new
chr9	114666433	114682066	chr9:114666433-114682066	1	-	114668250	114671723	789624	5	313,132,77,108,32,	0,1772,4949,5286,15601,
#Deleted in new
chr9	114695921	114696315	chr9:114695921-114696315	7	-	114695921	114695921	16724991	1	394,	0,
#Deleted in new
chr9	114774736	114775120	chr9:114774736-114775120	7	-	114774736	114774736	16724991	1	384,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	114784634	114806126	chr9:114784634-114806126	3	-	114790451	114806012	0	4	6272,48,43,324,	0,7772,8891,21168,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	114789319	114792108	chr9:114789319-114792108	1	-	114790451	114790976	789624	1	2789,	0,
#Deleted in new
chr9	114845593	114848585	chr9:114845593-114848585	7	+	114845593	114845593	16724991	1	2992,	0,
#Partially deleted in new
chr9	114850967	115121030	chr9:114850967-115121030	0	+	114850967	114850967	8553170	6	49,149,78,75,129,75,	0,70482,118616,218028,233287,269988,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	114893342	114930595	chr9:114893342-114930595	1	-	114894078	114930303	789624	5	822,99,72,43,487,	0,10884,12485,24753,36766,
#Partially deleted in new
chr9	114893722	114904308	chr9:114893722-114904308	0	-	114893722	114893722	8553170	2	442,82,	0,10504,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	114902843	114930417	chr9:114902843-114930417	3	-	114903930	114930303	789624	4	1482,72,43,309,	0,2984,15252,27265,
#Partially deleted in new
chr9	114958414	114969661	chr9:114958414-114969661	0	+	114958414	114958414	8553170	2	105,78,	0,11169,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	114969583	115240989	chr9:114969583-115240989	0	+	114969583	114969583	8553170	7	78,129,115,215,121,161,245,	0,114671,117756,172070,188011,263592,271161,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chr9	115019577	115118257	chr9:115019577-115118257	1	-	115021156	115091018	789624	24	1690,164,162,97,152,133,131,144,120,144,123,273,276,273,264,90,186,270,157,116,264,1410,593,276,	0,4395,6956,9782,10676,11975,15626,16520,18683,21363,22641,26832,33162,37575,54025,56454,56812,58365,62194,63114,64631,66286,70984,98404,
#Partially deleted in new
chr9	115020533	115118257	chr9:115020533-115118257	3	-	115021156	115091018	0	28	734,164,162,97,152,133,131,144,120,144,123,273,273,273,273,273,273,273,264,90,186,270,157,116,264,1410,593,276,	0,3439,6000,8826,9720,11019,14670,15564,17727,20407,21685,25876,27726,36619,39196,42383,43262,44113,53069,55498,55856,57409,61238,62158,63675,65330,70028,97448,
#Partially deleted in new
chr9	115020559	115091147	chr9:115020559-115091147	1	-	115021156	115091018	789624	25	708,164,162,97,152,133,131,144,120,144,123,273,273,273,273,273,264,90,186,270,157,116,264,1410,586,	0,3413,5974,8800,9694,10993,14644,15538,17701,20381,21659,25850,36593,39170,43236,44087,53043,55472,55830,57383,61212,62132,63649,65304,70002,
#Partially deleted in new
chr9	115020945	115112757	chr9:115020945-115112757	1	-	115021156	115091018	789624	25	322,164,162,97,152,133,131,144,120,144,123,273,273,273,273,264,90,186,270,157,116,264,1410,593,147,	0,3027,5588,8414,9308,10607,14258,15152,17315,19995,21273,38784,41971,42850,43701,52657,55086,55444,56997,60826,61746,63263,64918,69616,91665,
#Partially deleted in new
chr9	115021028	115091141	chr9:115021028-115091141	1	-	115021156	115091018	0	20	239,164,162,97,152,133,131,144,120,144,123,264,90,186,270,157,116,264,1410,580,	0,2944,5505,8331,9225,10524,14175,15069,17232,19912,21190,52574,55003,55361,56914,60743,61663,63180,64835,69533,
#Partially deleted in new
chr9	115021156	115091018	chr9:115021156-115091018	1	-	115021156	115091018	789624	23	111,164,162,97,152,133,131,144,120,144,123,273,276,273,264,90,186,270,157,116,264,1410,457,	0,2816,5377,8203,9097,10396,14047,14941,17104,19784,21062,25253,31583,35996,52446,54875,55233,56786,60615,61535,63052,64707,69405,
#Partially deleted in new
chr9	115029371	115064912	chr9:115029371-115064912	0	-	115029371	115064912	789624	11	85,152,133,131,144,120,144,123,273,273,266,	0,882,2181,5832,6726,8889,11569,12847,17038,27781,35275,
#Partially deleted in new
chr9	115030256	115035896	chr9:115030256-115035896	0	-	115030256	115030256	8553170	4	149,133,131,238,	0,1296,4947,5402,
#Partially deleted in new
chr9	115036101	115073641	chr9:115036101-115073641	0	-	115036101	115036101	8553170	5	140,120,144,123,39,	0,2159,4839,6117,37501,
#Partially deleted in new
chr9	115036184	115063168	chr9:115036184-115063168	0	-	115036184	115036184	8553170	5	57,120,144,123,252,	0,2076,4756,6034,26732,
#Partially deleted in new
chr9	115046466	115073772	chr9:115046466-115073772	0	-	115046466	115046466	8553170	2	216,170,	0,27136,
#Partially deleted in new
chr9	115046623	115059739	chr9:115046623-115059739	0	-	115046623	115059739	789624	2	59,10,	0,13106,
#Partially deleted in new
chr9	115048259	115055749	chr9:115048259-115055749	0	-	115048259	115048259	8553170	3	273,276,274,	0,4480,7216,
#Partially deleted in new
chr9	115090742	115118199	chr9:115090742-115118199	0	-	115090742	115091018	789624	3	412,104,218,	0,24260,27239,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	115119538	115138409	chr9:115119538-115138409	3	-	115119538	115119538	789624	6	170,76,117,678,164,320,	0,3258,6768,7411,8208,18551,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	115141817	115402644	chr9:115141817-115402644	0	+	115141817	115141817	8553170	8	51,161,155,91,74,74,118,527,	0,91358,149964,164088,234824,258541,259375,260300,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	115209929	115331330	chr9:115209929-115331330	0	+	115209929	115209929	8553170	5	146,161,155,91,1028,	0,23246,81852,95976,120373,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	115209937	115314415	chr9:115209937-115314415	2	+	115209937	115209937	8553170	6	138,161,115,155,91,2204,	0,23238,80885,81844,95968,102274,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	115252537	115254251	chr9:115252537-115254251	3	-	115252537	115252537	8553170	3	309,51,67,	0,575,1647,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	115290796	115314480	chr9:115290796-115314480	0	+	115290796	115290796	8553170	4	141,155,91,2269,	0,985,15109,21415,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	115376702	115402125	chr9:115376702-115402125	1	+	115376702	115402125	789624	4	13,74,118,8,	0,23656,24490,25415,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	115400345	115401315	chr9:115400345-115401315	1	+	115400345	115401315	789624	2	87,123,	0,847,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	115734391	115734491	chr9:115734391-115734491	3	+	115734391	115734391	8553170	1	100,	0,
#Partially deleted in new
chr9	115739221	115743864	chr9:115739221-115743864	1	-	115739221	115739221	8553170	4	653,101,256,85,	0,2240,3593,4558,
#Partially deleted in new
chr9	115739338	115741498	chr9:115739338-115741498	1	-	115739338	115739338	8553170	3	536,164,37,	0,1789,2123,
#Partially deleted in new
chr9	115888168	115925207	chr9:115888168-115925207	3	-	115888168	115888168	789624	3	312,272,185,	0,16202,36854,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	116012360	116012965	chr9:116012360-116012965	3	+	116012360	116012360	8553170	2	170,339,	0,266,
#Partially deleted in new
chr9	116153803	116402322	chr9:116153803-116402322	3	+	116154172	116396616	789624	22	784,1063,146,294,193,122,499,129,92,194,114,136,214,169,184,211,172,148,110,72,99,5814,	0,33350,53652,57835,66133,73627,81335,112053,117521,148953,177440,178529,181057,190739,193222,198902,199818,208788,213841,223772,228591,242705,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	116285828	116288769	chr9:116285828-116288769	3	-	116285828	116285828	8553170	2	1760,94,	0,2847,
#Partially deleted in new
chr9	116288617	116318689	chr9:116288617-116318689	3	-	116288617	116288617	8553170	4	275,233,134,86,	0,27696,29640,29986,
#Deleted in new
chr9	116332431	116335074	chr9:116332431-116335074	0	+	116332431	116332431	8553170	3	37,103,214,	0,312,2429,
#Partially deleted in new
chr9	116373198	116396616	chr9:116373198-116396616	0	+	116373198	116373198	8553170	4	511,72,99,108,	0,4377,9196,23310,
#Deleted in new
chr9	116398156	116400606	chr9:116398156-116400606	3	-	116398156	116398156	789624	1	2450,	0,
#Partially deleted in new
chr9	116425224	117415039	chr9:116425224-117415039	1	-	116425850	117414938	0	23	864,184,101,142,149,134,266,180,105,125,189,167,151,138,75,85,168,147,108,153,385,188,543,	0,15384,17228,62134,193099,195085,226303,300546,303767,308174,380407,395392,438358,549983,550889,551476,582867,614594,670819,716101,789133,866101,989272,
#Partially deleted in new
chr9	116425227	116687215	chr9:116425227-116687215	1	-	116425850	116686805	0	8	861,184,101,142,149,134,266,519,	0,15381,17225,62131,193096,195082,226300,261469,
#Partially deleted in new
chr9	116425227	116687234	chr9:116425227-116687234	1	-	116425589	116651755	0	9	399,213,184,101,142,149,134,266,169,	0,648,15381,17225,62131,193096,195082,226300,261838,
#Partially deleted in new
chr9	116425227	117415070	chr9:116425227-117415070	3	-	116425850	117414938	0	22	861,184,101,142,149,134,266,180,105,125,189,167,151,138,75,85,168,147,108,385,188,574,	0,15381,17225,62131,193096,195082,226300,300543,303764,308171,380404,395389,438355,549980,550886,551473,582864,614591,670816,789130,866098,989269,
#Partially deleted in new
chr9	116425227	117214553	chr9:116425227-117214553	0	-	116425850	117214553	789624	21	861,184,101,142,149,134,266,180,105,125,189,167,151,126,75,85,168,147,108,153,196,	0,15381,17225,62131,193096,195082,226300,300543,303764,308171,380404,395389,438355,549980,550886,551473,582864,614591,670816,716098,789130,
#Partially deleted in new
chr9	116425589	117415039	chr9:116425589-117415039	1	-	116425589	116651755	789624	23	37,234,184,101,142,149,134,266,180,105,125,189,167,151,138,75,85,168,147,108,385,188,543,	0,265,15019,16863,61769,192734,194720,225938,300181,303402,307809,380042,395027,437993,549618,550524,551111,582502,614229,670454,788768,865736,988907,
#Partially deleted in new
chr9	116437222	116440735	chr9:116437222-116440735	0	-	116437321	116440735	789624	3	176,92,127,	0,277,3386,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	116504282	116562293	chr9:116504282-116562293	3	+	116504282	116504282	789624	12	62,300,169,79,189,151,121,146,107,93,44,295,	0,36157,39390,41466,41669,42266,43031,43254,46704,47827,53324,57716,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	116568448	116586328	chr9:116568448-116586328	3	+	116568448	116568448	8553170	3	480,125,4391,	0,10490,13489,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	116610899	116687221	chr9:116610899-116687221	1	-	116613531	116651755	789624	5	2706,149,134,266,156,	0,7424,9410,40628,76166,
#Partially deleted in new
chr9	116687301	116701298	chr9:116687301-116701298	3	+	116697742	116699704	0	2	80,3637,	0,10360,
#Partially deleted in new
chr9	116687329	116701300	chr9:116687329-116701300	1	+	116697742	116699704	0	2	52,3636,	0,10335,
#Partially deleted in new
chr9	116687342	116698260	chr9:116687342-116698260	0	+	116697742	116698260	789624	3	39,61,599,	0,10030,10319,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	116838143	116877264	chr9:116838143-116877264	3	+	116838143	116838143	8553170	5	1147,89,136,46,657,	0,3285,4238,32055,38464,
#Deleted in new
chr9	117180627	117181095	chr9:117180627-117181095	7	-	117180627	117180627	16724991	1	468,	0,
#Deleted in new
chr9	117181065	117181200	chr9:117181065-117181200	3	-	117181065	117181065	789624	1	135,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	117197117	117197420	chr9:117197117-117197420	3	+	117197117	117197117	8553170	1	303,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	117276984	117277286	chr9:117276984-117277286	3	+	117276984	117276984	8553170	1	302,	0,
#Partially deleted in new
chr9	117462293	117466260	chr9:117462293-117466260	3	-	117462293	117462293	8553170	2	425,326,	0,3641,
#Partially deleted in new
chr9	117648605	117657027	chr9:117648605-117657027	3	+	117648605	117648605	789624	6	90,126,160,111,180,632,	0,2246,3682,5025,7002,7790,
#Deleted in new
chr9	117685253	117685588	chr9:117685253-117685588	7	-	117685253	117685253	16724991	1	335,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	117704156	117877064	chr9:117704156-117877064	0	+	117704472	117848110	789624	5	409,167,91,396,250,	0,4406,143908,165932,172658,
#Partially deleted in new
chr9	117704174	117714952	chr9:117704174-117714952	1	+	117704472	117712394	789624	2	391,2564,	0,8214,
#Partially deleted in new
chr9	117704191	117715775	chr9:117704191-117715775	1	+	117708589	117714648	0	4	374,120,167,3387,	0,4007,4371,8197,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	117704221	117724730	chr9:117704221-117724730	3	+	117704472	117714648	0	3	344,167,12342,	0,4341,8167,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	117704389	117877478	chr9:117704389-117877478	3	+	117704472	117848139	789624	3	176,91,664,	0,143675,172425,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	117704402	117717490	chr9:117704402-117717490	1	+	117704472	117714648	0	3	163,167,5102,	0,4160,7986,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	117707995	117708102	chr9:117707995-117708102	3	-	117707995	117707995	8553170	1	107,	0,
#Deleted in new
chr9	117708196	117708979	chr9:117708196-117708979	0	+	117708196	117708196	8553170	2	122,417,	0,366,
#Partially deleted in new
chr9	117759454	117780593	chr9:117759454-117780593	1	+	117759454	117759454	8553170	4	90,99,307,2680,	0,830,1688,18459,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	117759512	117877048	chr9:117759512-117877048	3	+	117759512	117759512	8553170	5	871,307,185,91,234,	0,1630,18577,88552,117302,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	117761213	117877443	chr9:117761213-117877443	1	+	117761213	117761213	8553170	3	236,162,7355,	0,41767,108875,
#Partially deleted in new
chr9	117761430	117848069	chr9:117761430-117848069	1	+	117761430	117761430	8553170	5	19,185,158,180,5,	0,16659,22905,25215,86634,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	117774950	117877444	chr9:117774950-117877444	1	+	117774950	117774950	8553170	3	3324,91,630,	0,73114,101864,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	117783431	117879988	chr9:117783431-117879988	0	+	117783431	117783431	8553170	3	137,91,2178,	0,64633,94379,
#Partially deleted in new
chr9	117783447	117868071	chr9:117783447-117868071	0	+	117783447	117783447	8553170	3	121,91,309,	0,64617,84315,
#Partially deleted in new
chr9	117840321	117897256	chr9:117840321-117897256	3	-	117840321	117840321	8553170	4	289,184,78,74,	0,29722,34637,56861,
#Partially deleted in new
chr9	118082868	118083382	chr9:118082868-118083382	7	-	118082868	118082868	16724991	1	514,	0,
#Partially deleted in new
chr9	118687751	118705960	chr9:118687751-118705960	3	-	118687751	118687751	8553170	2	252,134,	0,18075,
#Partially deleted in new
chr9	118740562	118745312	chr9:118740562-118745312	3	+	118740562	118740562	8553170	2	87,169,	0,4581,
#Deleted in new
chr9	118763866	118764345	chr9:118763866-118764345	7	+	118763866	118763866	16724991	1	479,	0,
#Partially deleted in new
chr9	119153457	119208886	chr9:119153457-119208886	0	-	119153457	119153457	8553170	2	404,168,	0,55261,
#Partially deleted in new
chr9	119166629	119369467	chr9:119166629-119369467	3	-	119167083	119313355	789624	8	1595,223,237,106,170,191,268,412,	0,42089,47289,72025,75417,82330,146508,202426,
#Partially deleted in new
chr9	119213619	119369425	chr9:119213619-119369425	1	-	119213877	119313355	789624	6	536,106,170,191,268,370,	0,25035,28427,35340,99518,155436,
#Partially deleted in new
chr9	119495374	119524125	chr9:119495374-119524125	3	+	119495374	119495374	8553170	3	183,59,1221,	0,17550,27530,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	119935052	119937832	chr9:119935052-119937832	3	+	119935052	119935052	789624	1	2780,	0,
#Deleted in new
chr9	119973093	119974322	chr9:119973093-119974322	3	+	119973093	119973093	8553170	3	70,126,186,	0,631,1043,
#Deleted in new
chr9	120244978	120245050	chr9:120244978-120245050	3	-	120244978	120244978	5263520	1	72,	0,
#Partially deleted in new
chr9	120388868	120580170	chr9:120388868-120580170	1	-	120389235	120579978	789624	35	424,47,127,144,266,78,237,122,190,117,120,173,49,233,574,123,232,138,107,131,101,144,171,219,93,120,54,163,155,124,77,111,68,68,251,	0,872,5643,11873,13937,15167,18143,19478,20258,22489,26171,30919,33824,48426,50530,54751,59026,78991,81242,82879,88481,98425,102438,129558,136117,138937,139875,141109,147503,150172,156845,161923,179452,183105,191051,
#Partially deleted in new
chr9	120388869	120580158	chr9:120388869-120580158	3	-	120389235	120579978	789624	38	423,47,127,144,266,78,237,122,190,117,120,173,49,233,574,123,232,418,173,96,138,110,131,101,144,171,219,93,120,54,163,155,124,77,111,68,68,239,	0,871,5642,11872,13936,15166,18142,19477,20257,22488,26170,30918,33823,48425,50529,54750,59025,64586,69580,71702,78990,81241,82878,88480,98424,102437,129557,136116,138936,139874,141108,147502,150171,156844,161922,179451,183104,191050,
#Partially deleted in new
chr9	120388875	120580158	chr9:120388875-120580158	1	-	120389235	120579978	789624	37	417,47,127,144,266,78,122,190,117,120,173,49,233,574,123,232,418,173,96,138,110,131,101,144,171,219,93,120,54,163,155,124,77,111,68,68,239,	0,865,5636,11866,13930,15160,19471,20251,22482,26164,30912,33817,48419,50523,54744,59019,64580,69574,71696,78984,81235,82872,88474,98418,102431,129551,136110,138930,139868,141102,147496,150165,156838,161916,179445,183098,191044,
#Deleted in new
chr9	120389194	120390277	chr9:120389194-120390277	0	-	120389194	120389194	8553170	2	98,537,	0,546,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chr9	120389195	120580005	chr9:120389195-120580005	0	-	120517811	120579978	789624	39	97,47,127,144,266,78,237,122,190,117,120,173,49,233,574,123,232,418,173,176,138,110,131,101,144,171,130,219,93,120,54,163,155,124,77,111,68,65,86,	0,545,5316,11546,13610,14840,17816,19151,19931,22162,25844,30592,33497,48099,50203,54424,58699,64260,69254,71376,78664,80915,82552,88154,98098,102111,128561,129231,135790,138610,139548,140782,147176,149845,156518,161596,179125,182781,190724,
#Partially deleted in new
chr9	120389195	120401019	chr9:120389195-120401019	0	-	120389195	120389195	8553170	4	97,47,127,278,	0,545,5316,11546,
#Partially deleted in new
chr9	120389195	120580005	chr9:120389195-120580005	0	-	120460600	120579978	789624	38	97,47,127,144,266,78,237,122,190,117,120,173,49,233,574,123,232,418,173,176,138,110,131,101,144,171,219,93,120,54,163,155,124,77,111,68,65,86,	0,545,5316,11546,13610,14840,17816,19151,19931,22162,25844,30592,33497,48099,50203,54424,58699,64260,69254,71376,78664,80915,82552,88154,98098,102111,129231,135790,138610,139548,140782,147176,149845,156518,161596,179125,182781,190724,
#Partially deleted in new
chr9	120389197	120477354	chr9:120389197-120477354	0	-	120389235	120477354	789624	23	95,47,127,144,266,78,237,122,190,117,120,173,49,233,574,123,232,418,173,138,110,131,5,	0,543,5314,11544,13608,14838,17814,19149,19929,22160,25842,30590,33495,48097,50201,54422,58697,64258,69252,78662,80913,82550,88152,
#Partially deleted in new
chr9	120389198	120403452	chr9:120389198-120403452	0	-	120389198	120389198	8553170	6	94,47,127,144,266,137,	0,542,5313,11543,13607,14117,
#Partially deleted in new
chr9	120389198	120403495	chr9:120389198-120403495	0	-	120389198	120389198	8553170	6	94,47,127,144,266,253,	0,542,5313,11543,13607,14044,
#Partially deleted in new
chr9	120389198	120403662	chr9:120389198-120403662	0	-	120389198	120389198	8553170	5	94,47,127,144,857,	0,542,5313,11543,13607,
#Partially deleted in new
chr9	120389200	120448072	chr9:120389200-120448072	0	-	120389235	120448072	789624	16	92,47,127,144,266,78,237,122,190,117,120,173,49,233,574,178,	0,540,5311,11541,13605,14835,17811,19146,19926,22157,25839,30587,33492,48094,50198,58694,
#Partially deleted in new
chr9	120406145	120536437	chr9:120406145-120536437	0	-	120406145	120406145	8553170	24	2323,190,117,120,173,49,233,574,123,232,418,173,138,110,131,101,144,171,219,93,120,54,163,66,	0,2981,5212,8894,13642,16547,31149,33253,37474,41749,47310,52304,61714,63965,65602,71204,81148,85161,112281,118840,121660,122598,123832,130226,
#Deleted in new
chr9	120439517	120440419	chr9:120439517-120440419	0	-	120439517	120439517	8553170	2	455,122,	0,780,
#Partially deleted in new
chr9	120439789	120458522	chr9:120439789-120458522	0	-	120439789	120439789	8553170	4	183,123,232,73,	0,3830,8105,18660,
#Partially deleted in new
chr9	120518599	120532555	chr9:120518599-120532555	0	-	120518599	120530064	789624	6	46,93,120,54,163,89,	0,6386,9206,10144,11378,13867,
#Partially deleted in new
chr9	120527825	120539120	chr9:120527825-120539120	0	-	120527825	120527825	8553170	4	100,54,155,80,	0,918,8546,11215,
#Partially deleted in new
chr9	120527905	120580061	chr9:120527905-120580061	0	-	120528901	120579978	789624	11	20,30,12,163,155,124,77,111,68,68,142,	0,838,987,2072,8466,11135,17808,22886,40415,44068,52014,
#Partially deleted in new
chr9	120571746	120580170	chr9:120571746-120580170	0	-	120571746	120571746	8553170	2	295,251,	0,8173,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	120600812	120714470	chr9:120600812-120714470	3	-	120605189	120714358	789624	6	4829,270,144,140,202,713,	0,6928,11583,21803,58561,112945,
#Deleted in new
chr9	120720672	120721972	chr9:120720672-120721972	7	+	120720672	120720672	16724991	1	1300,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	120751977	120776655	chr9:120751977-120776655	0	-	120751977	120751977	8553170	4	1334,170,87,563,	0,19370,20776,24115,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	120756973	120793412	chr9:120756973-120793412	3	-	120764558	120788258	789624	8	7874,170,87,134,195,510,109,59,	0,14374,15780,19119,21377,30795,36175,36380,
#Partially deleted in new
chr9	120771410	120793382	chr9:120771410-120793382	0	-	120771410	120787871	789624	7	107,87,134,195,418,109,29,	0,1343,4682,6940,16358,21738,21943,
#Partially deleted in new
chr9	120776088	120793367	chr9:120776088-120793367	0	-	120776088	120776088	8553170	4	138,195,510,219,	0,2262,11680,17060,
#Partially deleted in new
chr9	120788015	120793380	chr9:120788015-120793380	0	-	120788015	120788015	8553170	3	263,371,27,	0,4871,5338,
#Partially deleted in new
chr9	120792402	120799918	chr9:120792402-120799918	3	+	120796603	120799678	789624	3	130,187,1344,	0,4020,6172,
#Partially deleted in new
chr9	120793006	120798719	chr9:120793006-120798719	0	+	120796603	120798719	789624	3	483,187,145,	0,3416,5568,
#Partially deleted in new
chr9	120793550	120798632	chr9:120793550-120798632	0	+	120793550	120793550	8553170	2	372,58,	0,5024,
#Partially deleted in new
chr9	120812474	120812845	chr9:120812474-120812845	7	-	120812474	120812474	16724991	1	371,	0,
#Partially deleted in new
chr9	120815495	120824518	chr9:120815495-120824518	0	-	120815722	120824518	789624	4	293,141,110,25,	0,5343,5859,8998,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	120816052	120842984	chr9:120816052-120842984	3	-	120817905	120842909	789624	10	2111,141,110,192,143,110,129,114,145,248,	0,4786,5302,8441,10712,13046,15278,15779,17259,26684,
#Partially deleted in new
chr9	120817795	120842951	chr9:120817795-120842951	1	-	120817905	120842909	789624	9	368,141,110,192,143,110,114,145,215,	0,3043,3559,6698,8969,11303,14036,15516,24941,
#Partially deleted in new
chr9	120824129	120826894	chr9:120824129-120826894	0	-	120824129	120824129	8553170	2	556,130,	0,2635,
#Partially deleted in new
chr9	120824827	120851355	chr9:120824827-120851355	5	+	120824827	120824827	16724991	4	143,204,60,118,	0,20165,22466,26410,
#Partially deleted in new
chr9	120826594	120831401	chr9:120826594-120831401	0	-	120826594	120826594	8553170	2	313,71,	0,4736,
#Partially deleted in new
chr9	120831366	120842911	chr9:120831366-120842911	0	-	120831899	120842909	789624	3	93,114,175,	0,465,11370,
#Partially deleted in new
chr9	120831669	120842882	chr9:120831669-120842882	0	-	120831669	120831669	8553170	3	276,145,146,	0,1642,11067,
#Partially deleted in new
chr9	120831899	120842909	chr9:120831899-120842909	1	-	120831899	120842909	789624	2	46,173,	0,10837,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	120841805	120851448	chr9:120841805-120851448	4	+	120841805	120841805	16724991	3	635,60,211,	0,5488,9432,
#Partially deleted in new
chr9	120842995	120851440	chr9:120842995-120851440	6	+	120842995	120842995	16724991	3	444,60,203,	0,4298,8242,
#Partially deleted in new
chr9	120843099	120852603	chr9:120843099-120852603	4	+	120843099	120843099	16724991	4	340,204,60,1366,	0,1893,4194,8138,
#Deleted in new
chr9	120844299	120845276	chr9:120844299-120845276	4	+	120844299	120844299	16724991	2	600,284,	0,693,
#Partially deleted in new
chr9	120844712	120851524	chr9:120844712-120851524	4	+	120844712	120844712	16724991	5	187,204,60,295,287,	0,280,2581,5650,6525,
#Partially deleted in new
chr9	120844866	120851497	chr9:120844866-120851497	4	+	120844866	120844866	16724991	5	33,204,122,60,260,	0,126,1815,2427,6371,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	120844873	120854385	chr9:120844873-120854385	5	+	120844873	120844873	16724991	3	323,60,3148,	0,2420,6364,
#Partially deleted in new
chr9	120845201	120851498	chr9:120845201-120851498	4	+	120845201	120845201	16724991	3	272,60,261,	0,2092,6036,
#Partially deleted in new
chr9	120845309	120851492	chr9:120845309-120851492	4	+	120845309	120845309	16724991	3	311,60,255,	0,1984,5928,
#Partially deleted in new
chr9	120845453	120851490	chr9:120845453-120851490	4	+	120845453	120845453	16724991	3	434,60,253,	0,1840,5784,
#Partially deleted in new
chr9	120845465	120851490	chr9:120845465-120851490	4	+	120845465	120845465	16724991	3	422,107,253,	0,1781,5772,
#Partially deleted in new
chr9	120845648	120851718	chr9:120845648-120851718	4	+	120845648	120845648	16724991	3	178,60,481,	0,1645,5589,
#Partially deleted in new
chr9	120846509	120851491	chr9:120846509-120851491	4	+	120846509	120846509	16724991	4	294,60,84,254,	0,784,3413,4728,
#Partially deleted in new
chr9	120846598	120851524	chr9:120846598-120851524	4	+	120846598	120846598	16724991	3	263,60,287,	0,695,4639,
#Partially deleted in new
chr9	120846732	120851279	chr9:120846732-120851279	4	+	120846732	120846732	16724991	2	621,42,	0,4505,
#Partially deleted in new
chr9	120847293	120851339	chr9:120847293-120851339	5	+	120847293	120847293	16724991	3	60,43,102,	0,1643,3944,
#Partially deleted in new
chr9	120855651	120868911	chr9:120855651-120868911	1	-	120857943	120866952	789624	10	2635,96,86,88,162,68,121,69,96,104,	0,4438,5437,6266,6936,8397,10058,10376,11218,13156,
#Partially deleted in new
chr9	120855697	120894896	chr9:120855697-120894896	1	-	120857943	120894829	789624	15	2589,96,86,88,162,68,121,69,96,149,101,96,82,201,109,	0,4392,5391,6220,6890,8351,10012,10330,11172,13484,14147,14745,18281,18858,39090,
#Partially deleted in new
chr9	120855698	120877328	chr9:120855698-120877328	3	-	120857943	120874741	0	15	2588,96,86,88,162,68,121,69,96,149,101,96,82,201,238,	0,4391,5390,6219,6889,8350,10011,10329,11171,13483,14146,14744,18280,18857,21392,
#Partially deleted in new
chr9	120857929	120868844	chr9:120857929-120868844	0	-	120857929	120857929	8553170	9	357,96,86,162,68,121,69,96,37,	0,2160,3159,4658,6119,7780,8098,8940,10878,
#Partially deleted in new
chr9	120858193	120860546	chr9:120858193-120860546	0	-	120858193	120858193	8553170	2	93,457,	0,1896,
#Partially deleted in new
chr9	120860911	120865769	chr9:120860911-120865769	0	-	120860911	120860911	8553170	4	263,162,68,60,	0,1676,3137,4798,
#Deleted in new
chr9	120861110	120863026	chr9:120861110-120863026	0	-	120861110	120861110	8553170	3	64,88,414,	0,807,1502,
#Partially deleted in new
chr9	120861987	120868838	chr9:120861987-120868838	0	-	120861987	120866952	789624	7	18,162,68,121,69,96,31,	0,600,2061,3722,4040,4882,6820,
#Partially deleted in new
chr9	120864078	120868864	chr9:120864078-120868864	0	-	120864078	120864078	8553170	4	38,387,96,57,	0,1631,2791,4729,
#Partially deleted in new
chr9	120865783	120868356	chr9:120865783-120868356	0	-	120865783	120865783	8553170	3	313,96,97,	0,1086,2476,
#Partially deleted in new
chr9	120865802	120868622	chr9:120865802-120868622	0	-	120865802	120866952	789624	4	28,69,96,363,	0,225,1067,2457,
#Partially deleted in new
chr9	120869298	120877026	chr9:120869298-120877026	0	-	120869298	120874741	789624	6	32,101,96,82,201,46,	0,546,1144,4680,5257,7682,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	120869586	120877188	chr9:120869586-120877188	1	-	120869685	120874741	0	5	359,96,82,201,98,	0,856,4392,4969,7504,
#Partially deleted in new
chr9	120870486	120876433	chr9:120870486-120876433	0	-	120870486	120874741	789624	4	52,82,201,553,	0,3492,4069,5394,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	120902392	120928769	chr9:120902392-120928769	1	-	120905019	120926075	0	8	2846,149,178,411,66,88,366,2220,	0,6837,8943,10935,11842,21312,23543,24157,
#Partially deleted in new
chr9	120902392	120929173	chr9:120902392-120929173	3	-	120905019	120926075	0	9	2846,149,178,411,66,88,366,139,60,	0,6837,8943,10935,11842,21312,23543,24157,26721,
#Partially deleted in new
chr9	120902392	120914572	chr9:120902392-120914572	1	-	120905019	120913666	0	6	2846,149,178,411,66,65,	0,6837,8943,10935,11842,12115,
#Partially deleted in new
chr9	120952334	121050276	chr9:120952334-121050276	3	-	120952738	121050246	0	41	534,139,84,90,84,106,75,103,58,82,63,153,206,172,96,160,76,213,90,61,228,140,74,91,198,63,130,150,210,204,186,116,127,115,91,83,92,71,163,193,95,	0,1395,4950,7913,9147,10336,10558,11301,16726,17835,19595,22444,24365,27748,29509,30320,36711,37233,38856,43905,45212,53584,54569,56073,61538,62864,63919,65027,65308,67641,69174,71069,73119,74825,78062,79778,82468,85546,90669,93856,97847,
#Partially deleted in new
chr9	120956960	120962707	chr9:120956960-120962707	0	-	120956960	120956960	8553170	4	408,90,84,37,	0,3287,4521,5710,
#Partially deleted in new
chr9	120979558	120981892	chr9:120979558-120981892	0	-	120979558	120979558	8553170	3	161,172,49,	0,524,2285,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	120999676	121006928	chr9:120999676-121006928	0	-	120999676	120999676	8553170	3	375,140,25,	0,6242,7227,
#Partially deleted in new
chr9	121025695	121034826	chr9:121025695-121034826	0	-	121025695	121025695	8553170	5	208,115,91,83,24,	0,1464,4701,6417,9107,
#Partially deleted in new
chr9	121074862	121118571	chr9:121074862-121118571	1	+	121088326	121115126	789624	11	205,248,131,131,142,187,194,120,223,110,226,	0,13433,15412,20025,21559,23523,32939,37596,38639,40228,43483,
#Partially deleted in new
chr9	121075011	121177608	chr9:121075011-121177608	3	+	121088326	121177186	789624	44	56,173,248,131,131,142,187,194,120,223,110,195,154,221,177,135,146,208,180,180,117,142,149,190,314,209,193,131,141,127,165,160,116,218,158,74,189,226,206,141,267,63,207,446,	0,5294,13284,15263,19876,21410,23374,32790,37447,38490,40079,43334,48919,50704,60794,63533,65629,66369,67079,68891,69831,70232,71096,73660,75158,77473,79709,82458,82728,82971,83843,85131,86844,87042,89931,91095,92477,93084,94599,96396,98231,98663,100006,102151,
#Partially deleted in new
chr9	121088295	121177608	chr9:121088295-121177608	1	+	121088326	121177186	789624	42	248,131,131,142,187,194,120,223,110,195,154,221,177,135,146,208,180,180,117,142,149,190,314,209,193,131,141,127,165,160,116,218,158,74,189,226,206,141,267,63,207,446,	0,1979,6592,8126,10090,19506,24163,25206,26795,30050,35635,37420,47510,50249,52345,53085,53795,55607,56547,56948,57812,60376,61874,64189,66425,69174,69444,69687,70559,71847,73560,73758,76647,77811,79193,79800,81315,83112,84947,85379,86722,88867,
#Deleted in new
chr9	121111062	121113691	chr9:121111062-121113691	0	+	121111062	121111062	8553170	3	212,120,190,	0,1396,2439,
#Partially deleted in new
chr9	121112458	121150654	chr9:121112458-121150654	0	+	121112458	121112458	8553170	17	120,223,110,195,154,221,177,135,146,208,180,180,117,142,149,190,485,	0,1043,2632,5887,11472,13257,23347,26086,28182,28922,29632,31444,32384,32785,33649,36213,37711,
#Partially deleted in new
chr9	121118468	121177610	chr9:121118468-121177610	1	+	121123936	121177186	789624	33	72,154,221,177,135,146,208,180,180,117,142,149,190,314,209,193,131,141,127,165,160,116,218,158,74,189,226,206,141,267,63,207,448,	0,5462,7247,17337,20076,22172,22912,23622,25434,26374,26775,27639,30203,31701,34016,36252,39001,39271,39514,40386,41674,43387,43585,46474,47638,49020,49627,51142,52939,54774,55206,56549,58694,
#Partially deleted in new
chr9	121121800	121158114	chr9:121121800-121158114	1	+	121123936	121157884	789624	18	151,154,221,177,135,146,208,180,180,117,142,149,190,314,209,193,131,375,	0,2130,3915,14005,16744,18840,19580,20290,22102,23042,23443,24307,26871,28369,30684,32920,35669,35939,
#Partially deleted in new
chr9	121144052	121160245	chr9:121144052-121160245	0	+	121152514	121160245	789624	13	30,117,142,149,190,136,209,193,131,141,127,165,103,	0,790,1191,2055,4619,6117,8432,10668,13417,13687,13930,14802,16090,
#Partially deleted in new
chr9	121152042	121177610	chr9:121152042-121177610	0	+	121152042	121152042	8553170	19	651,193,131,141,127,165,160,116,218,158,74,189,226,206,141,267,63,207,448,	0,2678,5427,5697,5940,6812,8100,9813,10011,12900,14064,15446,16053,17568,19365,21200,21632,22975,25120,
#Partially deleted in new
chr9	121157542	121177607	chr9:121157542-121177607	1	+	121164973	121177186	789624	16	58,141,31,127,160,158,74,189,41,110,206,141,267,63,207,445,	0,197,440,1350,2600,7400,8564,9946,10553,10669,12068,13865,15700,16132,17475,19620,
#Partially deleted in new
chr9	121157842	121161505	chr9:121157842-121161505	1	+	121158010	121161296	789624	5	38,127,165,160,223,	0,140,1012,2300,3440,
#Partially deleted in new
chr9	121158585	121161505	chr9:121158585-121161505	0	+	121158585	121158585	8553170	3	434,160,223,	0,1557,2697,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	121178136	121201869	chr9:121178136-121201869	3	-	121181395	121193412	0	8	3437,31,88,67,178,54,59,231,	0,4793,5174,8816,12417,14034,15224,23502,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	121181498	121223014	chr9:121181498-121223014	0	-	121181498	121193412	789624	9	75,31,88,67,178,54,59,54,105,	0,1431,1812,5454,9055,10672,11862,40701,41411,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	121203158	121203435	chr9:121203158-121203435	3	+	121203158	121203158	8553170	1	277,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	121207793	121265186	chr9:121207793-121265186	0	+	121207793	121207793	8553170	6	104,102,94,84,139,33,	0,1502,2442,2990,23371,57360,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr9	121207799	121332843	chr9:121207799-121332843	1	+	121301971	121332603	0	25	98,102,94,84,139,48,144,94,93,205,155,162,150,90,133,89,216,134,91,171,175,125,78,61,410,	0,1496,2436,2984,23365,40476,57354,57861,73670,94163,95111,102884,104539,106134,109286,110606,110865,113468,116754,118712,119508,121091,121438,123588,124634,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	121238116	121240089	chr9:121238116-121240089	7	-	121238116	121238116	16724991	2	47,1416,	0,557,
#Partially deleted in new
chr9	121268059	121332738	chr9:121268059-121332738	1	+	121300102	121332603	0	19	160,93,71,205,155,162,150,90,133,89,216,134,91,171,175,125,78,61,305,	0,13410,31996,33903,34851,42624,44279,45874,49026,50346,50605,53208,56494,58452,59248,60831,61178,63328,64374,
#Partially deleted in new
chr9	121268059	121317112	chr9:121268059-121317112	2	+	121301971	121317112	789624	8	160,93,205,155,162,150,90,27,	0,13410,33903,34851,42624,44279,45874,49026,
#Partially deleted in new
chr9	121268162	121312475	chr9:121268162-121312475	0	+	121268162	121268162	8553170	5	57,205,155,162,137,	0,33800,34748,42521,44176,
#Partially deleted in new
chr9	121268167	121332843	chr9:121268167-121332843	1	+	121282451	121332603	789624	19	52,93,112,205,155,162,150,90,133,89,216,134,91,171,175,125,78,61,410,	0,13302,14271,33795,34743,42516,44171,45766,48918,50238,50497,53100,56386,58344,59140,60723,61070,63220,64266,
#Deleted in new
chr9	121279862	121282730	chr9:121279862-121282730	3	-	121279862	121279862	8553170	2	576,262,	0,2606,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	121280767	121285530	chr9:121280767-121285530	3	-	121280767	121280767	5263520	1	4763,	0,
#Partially deleted in new
chr9	121286122	121332646	chr9:121286122-121332646	1	+	121286143	121332603	789624	17	63,205,155,162,150,90,133,89,216,134,91,171,175,125,78,61,213,	0,15840,16788,24561,26216,27811,30963,32283,32542,35145,38431,40389,41185,42768,43115,45265,46311,
#Partially deleted in new
chr9	121286122	121312488	chr9:121286122-121312488	0	+	121300102	121312488	789624	6	63,71,205,155,162,150,	0,13933,15840,16788,24561,26216,
#Partially deleted in new
chr9	121286591	121332656	chr9:121286591-121332656	1	+	121286746	121332603	0	17	170,205,155,162,150,90,133,89,216,134,91,171,175,125,78,61,223,	0,15371,16319,24092,25747,27342,30494,31814,32073,34676,37962,39920,40716,42299,42646,44796,45842,
#Partially deleted in new
chr9	121299792	121332842	chr9:121299792-121332842	1	+	121299861	121332603	0	17	213,205,155,162,150,90,133,89,216,134,91,171,175,125,78,61,409,	0,2170,3118,10891,12546,14141,17293,18613,18872,21475,24761,26719,27515,29098,29445,31595,32641,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	121308370	121317886	chr9:121308370-121317886	0	+	121308370	121308370	8553170	2	5653,801,	0,8715,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	121311470	121331890	chr9:121311470-121331890	0	+	121311470	121311470	8553170	12	1018,90,133,89,216,134,91,171,175,125,78,503,	0,2463,5615,6935,7194,9797,13083,15041,15837,17420,17767,19917,
#Partially deleted in new
chr9	121326581	121332662	chr9:121326581-121332662	0	+	121326581	121326784	789624	6	211,175,125,78,61,229,	0,726,2309,2656,4806,5852,
#Partially deleted in new
chr9	121328852	121332589	chr9:121328852-121332589	0	+	121328852	121328852	8553170	3	463,61,156,	0,2535,3581,
#Partially deleted in new
chr9	121338987	121370304	chr9:121338987-121370304	1	-	121339620	121370187	789624	6	654,165,83,73,104,178,	0,10171,14232,15613,17065,31139,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	121339076	121370205	chr9:121339076-121370205	3	-	121341201	121370187	789624	7	2332,135,204,83,73,104,79,	0,8938,10043,14143,15524,16976,31050,
#Partially deleted in new
chr9	121340769	121370253	chr9:121340769-121370253	1	-	121341201	121370187	789624	3	639,104,127,	0,15283,29357,
#Partially deleted in new
chr9	121369905	121463237	chr9:121369905-121463237	3	+	121369905	121369905	8553170	4	61,95,114,201,	0,5325,92751,93131,
#Partially deleted in new
chr9	121375240	121452177	chr9:121375240-121452177	1	+	121375240	121375240	8553170	3	85,152,203,	0,65135,76734,
#Partially deleted in new
chr9	121444990	121499757	chr9:121444990-121499757	5	-	121444990	121444990	16724991	8	2607,138,116,66,36,89,269,108,	0,7153,15113,16261,18302,22852,34075,54659,
#Partially deleted in new
chr9	121444990	121499757	chr9:121444990-121499757	7	-	121444990	121444990	16724991	8	2607,187,116,66,36,89,269,108,	0,10664,15113,16261,18302,22852,34075,54659,
#Partially deleted in new
chr9	121446910	121467922	chr9:121446910-121467922	5	-	121446910	121446910	16724991	6	685,130,116,61,36,76,	0,5235,13193,14343,16382,20936,
#Partially deleted in new
chr9	121455039	121500027	chr9:121455039-121500027	5	-	121455039	121455039	16724991	6	802,116,66,36,89,378,	0,5064,6212,8253,12803,44610,
#Partially deleted in new
chr9	121455040	121499816	chr9:121455040-121499816	4	-	121455040	121455040	16724991	7	801,116,66,36,89,269,167,	0,5063,6211,8252,12802,24025,44609,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	121494518	121494821	chr9:121494518-121494821	3	+	121494518	121494518	8553170	1	303,	0,
#Partially deleted in new
chr9	121519815	121520424	chr9:121519815-121520424	7	-	121519815	121519815	16724991	1	609,	0,
#Partially deleted in new
chr9	121567056	121760227	chr9:121567056-121760227	0	+	121567188	121760227	789624	6	172,104,134,154,99,343,	0,111621,132268,189956,191841,192828,
#Partially deleted in new
chr9	121567101	121785528	chr9:121567101-121785528	3	+	121567188	121783545	789624	17	127,104,134,154,99,555,145,145,237,202,179,889,153,194,88,71,1993,	0,111576,132223,189911,191796,192783,196403,196633,199392,201330,203444,205505,207158,209096,214362,215229,216434,
#Partially deleted in new
chr9	121567101	121760328	chr9:121567101-121760328	0	+	121757022	121760328	789624	5	127,104,154,99,444,	0,111576,189911,191796,192783,
#Deleted in new
chr9	121574890	121576214	chr9:121574890-121576214	3	-	121574890	121574890	8553170	2	522,140,	0,1184,
#Partially deleted in new
chr9	121598267	121678782	chr9:121598267-121678782	0	+	121598523	121678782	8553170	2	359,105,	0,80410,
#Partially deleted in new
chr9	121651593	121785530	chr9:121651593-121785530	1	+	121651775	121782498	789624	16	306,104,134,154,99,555,145,145,237,202,179,889,153,194,88,3200,	0,27084,47731,105419,107304,108291,111911,112141,114900,116838,118952,121013,122666,124604,129870,130737,
#Partially deleted in new
chr9	121651684	121678845	chr9:121651684-121678845	0	+	121651684	121651684	8553170	2	215,168,	0,26993,
#Partially deleted in new
chr9	121699369	121785528	chr9:121699369-121785528	0	+	121699369	121783545	789624	15	89,154,99,555,145,145,237,202,179,889,153,194,88,71,1993,	0,57643,59528,60515,64135,64365,67124,69062,71176,73237,74890,76828,82094,82961,84166,
#Partially deleted in new
chr9	121737150	121785530	chr9:121737150-121785530	1	+	121737536	121782498	8553170	14	565,154,99,555,145,145,237,202,179,889,153,194,88,3200,	0,19862,21747,22734,26354,26584,29343,31281,33395,35456,37109,39047,44313,45180,
#Partially deleted in new
chr9	121742784	121782653	chr9:121742784-121782653	1	+	121757022	121782498	789624	14	137,154,99,555,145,145,237,202,179,889,153,194,88,323,	0,14228,16113,17100,20720,20950,23709,25647,27761,29822,31475,33413,38679,39546,
#Partially deleted in new
chr9	121743560	121757166	chr9:121743560-121757166	0	+	121757022	121757166	8553170	2	154,154,	0,13452,
#Deleted in new
chr9	121750971	121757076	chr9:121750971-121757076	0	+	121750971	121750971	8553170	4	423,270,199,64,	0,741,1926,6041,
#Deleted in new
chr9	121760339	121768526	chr9:121760339-121768526	0	+	121760339	121760339	8553170	4	100,145,145,95,	0,3165,3395,8092,
#Deleted in new
chr9	121815673	121819452	chr9:121815673-121819452	3	-	121815673	121815673	8553170	1	3779,	0,
#Partially deleted in new
chr9	121821927	122093606	chr9:121821927-122093606	3	-	121822586	122093418	789624	9	952,107,252,116,96,576,134,97,920,	0,38409,48569,152081,152956,167267,209795,217344,270759,
#Deleted in new
chr9	121821966	121822860	chr9:121821966-121822860	0	-	121821966	121821966	8553170	2	332,121,	0,773,
#Partially deleted in new
chr9	121821970	122092808	chr9:121821970-122092808	0	-	121989541	122092808	789624	9	909,107,252,116,96,423,73,97,122,	0,38366,48526,152038,152913,167224,209813,217301,270716,
#Partially deleted in new
chr9	121822012	122093284	chr9:121822012-122093284	0	-	121989747	122093284	789624	8	867,107,252,106,96,576,97,598,	0,38324,48484,151996,152871,167182,217259,270674,
#Partially deleted in new
chr9	121884635	121963719	chr9:121884635-121963719	3	-	121884635	121884635	8553170	2	940,112,	0,78972,
#Partially deleted in new
chr9	121988909	122093606	chr9:121988909-122093606	1	-	121989116	122093418	789624	4	861,134,97,920,	0,42813,50362,103777,
#Partially deleted in new
chr9	121988909	122092766	chr9:121988909-122092766	0	-	121989747	122092766	789624	3	861,97,80,	0,50362,103777,
#Deleted in new
chr9	122120081	122120167	chr9:122120081-122120167	3	-	122120081	122120081	5263520	1	86,	0,
#Partially deleted in new
chr9	122144057	122159819	chr9:122144057-122159819	3	-	122144240	122159677	0	4	321,166,164,193,	0,4054,8187,15569,
#Partially deleted in new
chr9	122159907	122200088	chr9:122159907-122200088	1	+	122159972	122174591	789624	4	112,148,132,204,	0,6860,14588,39977,
#Partially deleted in new
chr9	122159910	122200088	chr9:122159910-122200088	3	+	122159972	122199931	789624	5	109,148,112,132,204,	0,6857,9734,14585,39974,
#Partially deleted in new
chr9	122164614	122174568	chr9:122164614-122174568	0	+	122166768	122174568	789624	4	33,148,112,73,	0,2153,5030,9881,
#Partially deleted in new
chr9	122166767	122200083	chr9:122166767-122200083	0	+	122166767	122166767	8553170	3	148,132,199,	0,7728,33117,
#Partially deleted in new
chr9	122169660	122174754	chr9:122169660-122174754	0	+	122169660	122169660	8553170	2	96,259,	0,4835,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	122202576	122227586	chr9:122202576-122227586	1	-	122204759	122227477	789624	9	2204,104,175,96,101,221,122,183,178,	0,7037,11029,11397,11706,14491,23799,24271,24832,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	122202578	122228941	chr9:122202578-122228941	1	-	122204700	122228740	789624	9	2202,175,96,101,221,122,183,72,285,	0,11027,11395,11704,14489,23797,24269,24830,26078,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	122202578	122227586	chr9:122202578-122227586	1	-	122204700	122227477	789624	8	2202,175,96,101,221,122,183,178,	0,11027,11395,11704,14489,23797,24269,24830,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	122202578	122228845	chr9:122202578-122228845	3	-	122204759	122228740	789624	10	2202,104,175,96,101,221,122,183,72,189,	0,7035,11027,11395,11704,14489,23797,24269,24830,26078,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	122202582	122221740	chr9:122202582-122221740	1	-	122204759	122217101	789624	7	2198,104,175,96,101,221,692,	0,7031,11023,11391,11700,14485,18466,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	122202930	122228428	chr9:122202930-122228428	1	-	122204700	122228357	789624	9	1850,175,96,101,221,122,183,72,122,	0,10675,11043,11352,14137,23445,23917,24478,25376,
#Partially deleted in new
chr9	122204254	122213893	chr9:122204254-122213893	1	-	122204759	122213633	789624	3	526,104,288,	0,5359,9351,
#Partially deleted in new
chr9	122204431	122213922	chr9:122204431-122213922	1	-	122204700	122213633	789624	2	349,317,	0,9174,
#Partially deleted in new
chr9	122217082	122226761	chr9:122217082-122226761	0	-	122217082	122217082	8553170	2	206,386,	0,9293,
#Partially deleted in new
chr9	122217104	122227123	chr9:122217104-122227123	0	-	122217104	122217104	8553170	3	184,122,276,	0,9271,9743,
#Deleted in new
chr9	122226998	122228431	chr9:122226998-122228431	0	-	122226998	122227477	789624	3	32,72,632,	0,410,801,
#Deleted in new
chr9	122227415	122229626	chr9:122227415-122229626	0	-	122227415	122227415	8553170	4	65,60,169,256,	0,384,1241,1955,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	122237623	122264839	chr9:122237623-122264839	3	-	122241883	122261492	789624	6	4420,86,87,127,129,125,	0,7632,9894,14223,23756,27091,
#Partially deleted in new
chr9	122241669	122247546	chr9:122241669-122247546	0	-	122241669	122241669	8553170	4	374,125,86,29,	0,2074,3586,5848,
#Partially deleted in new
chr9	122241757	122264794	chr9:122241757-122264794	0	-	122241757	122241757	789624	7	286,86,87,127,94,129,80,	0,3498,5760,10089,12516,19622,22957,
#Partially deleted in new
chr9	122264602	122323461	chr9:122264602-122323461	1	+	122270891	122322617	789624	6	336,212,119,92,160,922,	0,6261,20566,27146,48624,57937,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	122264655	122331343	chr9:122264655-122331343	3	+	122270891	122322617	789624	7	283,212,156,119,92,160,8804,	0,6208,15787,20513,27093,48571,57884,
#Partially deleted in new
chr9	122264886	122285287	chr9:122264886-122285287	0	+	122270891	122285287	789624	5	52,319,212,156,119,	0,575,5977,15556,20282,
#Partially deleted in new
chr9	122264894	122323092	chr9:122264894-122323092	1	+	122270891	122322594	789624	6	44,212,156,119,92,553,	0,5969,15548,20274,26854,57645,
#Partially deleted in new
chr9	122264903	122322724	chr9:122264903-122322724	1	+	122271023	122322617	789624	7	35,123,156,119,92,160,185,	0,6049,15539,20265,26845,48323,57636,
#Partially deleted in new
chr9	122264913	122285394	chr9:122264913-122285394	0	+	122264913	122264913	8553170	5	25,84,212,156,226,	0,548,5950,15529,20255,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	122264913	122291798	chr9:122264913-122291798	0	+	122264913	122264913	8553170	6	25,212,156,778,128,50,	0,5950,15529,20255,21125,26835,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	122264925	122322678	chr9:122264925-122322678	0	+	122270891	122285827	789624	9	13,212,156,119,167,128,92,160,139,	0,5938,15517,20243,20854,21113,26823,48301,57614,
#Partially deleted in new
chr9	122265461	122285946	chr9:122265461-122285946	0	+	122265461	122265461	8553170	5	319,123,156,119,167,	0,5491,14981,19707,20318,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	122270807	122313330	chr9:122270807-122313330	0	+	122270891	122286110	789624	6	268,156,119,128,92,104,	0,9635,14361,15231,20941,42419,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	122270847	122323088	chr9:122270847-122323088	0	+	122270891	122285827	789624	8	228,156,119,167,128,92,160,549,	0,9595,14321,14932,15191,20901,42379,51692,
#Partially deleted in new
chr9	122270863	122323461	chr9:122270863-122323461	1	+	122270891	122322594	789624	5	212,156,119,92,922,	0,9579,14305,20885,51676,
#Partially deleted in new
chr9	122370529	122392388	chr9:122370529-122392388	0	+	122378548	122392388	789624	11	313,87,117,141,144,182,84,247,176,148,200,	0,656,7369,7903,8245,10841,11134,12979,15916,19668,21659,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	122370541	122392654	chr9:122370541-122392654	1	+	122371815	122392544	789624	12	301,87,222,117,141,144,182,84,247,176,148,466,	0,644,1071,7357,7891,8233,10829,11122,12967,15904,19656,21647,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	122371004	122395703	chr9:122371004-122395703	3	+	122371084	122392544	789624	11	87,87,117,141,144,182,84,247,287,148,3515,	0,181,6894,7428,7770,10366,10659,12504,15441,19193,21184,
#Partially deleted in new
chr9	122371011	122393114	chr9:122371011-122393114	0	+	122371011	122371011	8553170	6	261,117,141,287,148,926,	0,6887,7421,15434,19186,21177,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	122371023	122395703	chr9:122371023-122395703	1	+	122371084	122392544	789624	11	68,87,117,141,144,182,84,247,287,148,3515,	0,162,6875,7409,7751,10347,10640,12485,15422,19174,21165,
#Partially deleted in new
chr9	122371024	122393254	chr9:122371024-122393254	0	+	122371084	122377959	789624	11	67,87,88,141,144,182,84,247,287,148,1066,	0,161,6903,7408,7750,10346,10639,12484,15421,19173,21164,
#Partially deleted in new
chr9	122371038	122392608	chr9:122371038-122392608	1	+	122371084	122392544	789624	10	53,87,117,141,182,84,247,287,148,420,	0,147,6860,7394,10332,10625,12470,15407,19159,21150,
#Partially deleted in new
chr9	122371070	122383570	chr9:122371070-122383570	0	+	122371084	122383570	789624	7	21,87,141,77,57,84,62,	0,115,7362,7704,10425,10593,12438,
#Partially deleted in new
chr9	122371079	122393178	chr9:122371079-122393178	1	+	122371084	122392544	789624	11	12,87,117,141,144,182,84,247,176,148,990,	0,106,6819,7353,7695,10291,10584,12429,15366,19118,21109,
#Partially deleted in new
chr9	122371084	122392544	chr9:122371084-122392544	0	+	122371084	122371084	8553170	10	188,117,141,144,182,84,247,287,148,356,	0,6814,7348,7690,10286,10579,12424,15361,19113,21104,
#Deleted in new
chr9	122372604	122372825	chr9:122372604-122372825	3	+	122372604	122372604	8553170	1	221,	0,
#Partially deleted in new
chr9	122375321	122392788	chr9:122375321-122392788	1	+	122378548	122392544	789624	10	123,117,141,144,182,84,247,287,148,600,	0,2577,3111,3453,6049,6342,8187,11124,14876,16867,
#Partially deleted in new
chr9	122400969	122402906	chr9:122400969-122402906	3	-	122400969	122400969	8553170	2	264,37,	0,1900,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	122403406	122448977	chr9:122403406-122448977	3	+	122403406	122403406	8553170	6	50,120,69,118,117,48,	0,1265,12307,13361,44022,45523,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	122476957	122477926	chr9:122476957-122477926	3	-	122476957	122477926	789624	1	969,	0,
#Deleted in new
chr9	122510801	122511743	chr9:122510801-122511743	3	+	122510801	122511743	789624	1	942,	0,
#Deleted in new
chr9	122519140	122520082	chr9:122519140-122520082	3	+	122519140	122520082	789624	1	942,	0,
#Deleted in new
chr9	122526357	122527293	chr9:122526357-122527293	3	-	122526357	122527293	789624	1	936,	0,
#Deleted in new
chr9	122526357	122527296	chr9:122526357-122527296	1	-	122526357	122527296	789624	1	939,	0,
#Partially deleted in new
chr9	122553111	122554214	chr9:122553111-122554214	1	+	122553211	122554162	789624	1	1103,	0,
#Partially deleted in new
chr9	122553169	122554162	chr9:122553169-122554162	3	+	122553169	122554162	789624	1	993,	0,
#Partially deleted in new
chr9	122567498	122568559	chr9:122567498-122568559	1	-	122567547	122568477	789624	1	1061,	0,
#Partially deleted in new
chr9	122607863	122608800	chr9:122607863-122608800	7	+	122607863	122607863	16724991	1	937,	0,
#Partially deleted in new
chr9	122609914	122639678	chr9:122609914-122639678	0	+	122609914	122609914	8553170	3	136,134,81,	0,27188,29683,
#Partially deleted in new
chr9	122614737	122615682	chr9:122614737-122615682	3	+	122614737	122615682	789624	1	945,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	122619357	122639685	chr9:122619357-122639685	3	+	122619357	122619357	8553170	4	210,68,131,88,	0,1090,17748,20240,
#Deleted in new
chr9	122628578	122629573	chr9:122628578-122629573	3	-	122628578	122629535	789624	1	995,	0,
#Deleted in new
chr9	122661565	122662648	chr9:122661565-122662648	1	+	122661565	122662648	789624	1	1083,	0,
#Deleted in new
chr9	122661715	122662648	chr9:122661715-122662648	3	+	122661715	122662648	789624	1	933,	0,
#Deleted in new
chr9	122675035	122676153	chr9:122675035-122676153	3	+	122675129	122676104	789624	1	1118,	0,
#Deleted in new
chr9	122685932	122688372	chr9:122685932-122688372	7	+	122685932	122685932	16724991	1	2440,	0,
#Deleted in new
chr9	122723989	122724925	chr9:122723989-122724925	3	+	122723989	122724925	789624	1	936,	0,
#Partially deleted in new
chr9	122742302	122750783	chr9:122742302-122750783	3	+	122749847	122750783	789624	2	71,949,	0,7532,
#Deleted in new
chr9	122749739	122750783	chr9:122749739-122750783	1	+	122749739	122750783	789624	1	1044,	0,
#Partially deleted in new
chr9	122761843	122762233	chr9:122761843-122762233	7	+	122761843	122761843	16724991	1	390,	0,
#Deleted in new
chr9	122788932	122789895	chr9:122788932-122789895	3	+	122788932	122789895	789624	1	963,	0,
#Partially deleted in new
chr9	122798388	122826686	chr9:122798388-122826686	0	-	122798518	122826686	789624	3	151,182,71,	0,24627,28227,
#Deleted in new
chr9	122800122	122801073	chr9:122800122-122801073	3	+	122800122	122801073	789624	1	951,	0,
#Partially deleted in new
chr9	122818343	122828631	chr9:122818343-122828631	3	-	122820084	122826787	789624	4	2293,182,177,161,	0,4672,8272,10127,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	122820543	122826752	chr9:122820543-122826752	0	-	122820810	122826752	789624	3	276,182,137,	0,2472,6072,
#Partially deleted in new
chr9	122837556	122838820	chr9:122837556-122838820	7	+	122837556	122837556	16724991	1	1264,	0,
#Partially deleted in new
chr9	122844555	122898110	chr9:122844555-122898110	1	-	122849626	122897509	0	20	5267,149,114,135,82,85,214,147,171,434,215,309,113,119,133,201,176,234,118,832,	0,6525,6767,9396,9629,9975,10628,11176,13367,14113,15361,20793,32915,35199,35437,36038,38648,45756,48353,52723,
#Partially deleted in new
chr9	122847554	122905222	chr9:122847554-122905222	0	-	122865463	122897509	0	22	2268,149,114,135,82,85,214,147,171,434,215,193,34,113,119,133,201,176,234,118,298,113,	0,3526,3768,6397,6630,6976,7629,8177,10368,11114,12362,17794,18069,29916,32200,32438,33039,35649,42757,45354,49724,57555,
#Partially deleted in new
chr9	122849436	122854606	chr9:122849436-122854606	0	-	122849793	122854606	789624	6	386,130,114,135,82,76,	0,1663,1886,4515,4748,5094,
#Partially deleted in new
chr9	122849452	122905283	chr9:122849452-122905283	3	-	122849626	122897509	0	21	370,149,114,135,82,85,214,147,171,434,215,309,113,119,133,201,176,234,118,298,174,	0,1628,1870,4499,4732,5078,5731,6279,8470,9216,10464,15896,28018,30302,30540,31141,33751,40859,43456,47826,55657,
#Partially deleted in new
chr9	122849798	122851569	chr9:122849798-122851569	0	-	122849798	122849798	8553170	3	24,149,247,	0,1282,1524,
#Partially deleted in new
chr9	122853744	122905341	chr9:122853744-122905341	1	-	122853873	122897509	0	18	342,82,85,214,147,171,434,215,309,113,119,133,201,176,234,118,298,232,	0,440,786,1439,1987,4178,4924,6172,11604,23726,26010,26248,26849,29459,36567,39164,43534,51365,
#Partially deleted in new
chr9	122853773	122855737	chr9:122853773-122855737	0	-	122854201	122855737	789624	5	313,82,51,214,6,	0,411,757,1410,1958,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	122873785	122905215	chr9:122873785-122905215	1	-	122875172	122897509	789624	10	1583,113,119,133,201,176,234,118,298,106,	0,3685,5969,6207,6808,9418,16526,19123,23493,31324,
#Deleted in new
chr9	122880212	122880323	chr9:122880212-122880323	3	-	122880212	122880212	789624	1	111,	0,
#Partially deleted in new
chr9	122890169	122905280	chr9:122890169-122905280	0	-	122890169	122890169	8553170	2	376,171,	0,14940,
#Partially deleted in new
chr9	122890170	122897534	chr9:122890170-122897534	1	-	122890237	122897509	0	3	375,118,256,	0,2738,7108,
#Deleted in new
chr9	122908055	122913330	chr9:122908055-122913330	3	-	122910797	122912072	789624	2	4026,80,	0,5195,
#Partially deleted in new
chr9	122915565	122931500	chr9:122915565-122931500	3	-	122918608	122919934	789624	2	4379,64,	0,15871,
#Partially deleted in new
chr9	122918099	122931265	chr9:122918099-122931265	1	-	122918608	122919934	789624	2	1845,202,	0,12964,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	122937622	122940326	chr9:122937622-122940326	3	+	122937622	122937622	8553170	2	1760,233,	0,2471,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	122939419	122940333	chr9:122939419-122940333	1	+	122939419	122939419	8553170	1	914,	0,
#Partially deleted in new
chr9	122940832	123103268	chr9:122940832-123103268	0	+	122984538	123065557	0	28	65,199,288,235,205,175,158,111,67,103,170,175,94,151,254,75,90,126,144,42,129,93,111,105,84,72,198,178,	0,16178,30832,43652,45382,48464,49223,55208,55706,56426,57764,69521,74710,79476,124515,129517,130579,132719,133452,135412,135801,148925,149442,156908,157882,158645,160733,162258,
#Partially deleted in new
chr9	122941008	123104866	chr9:122941008-123104866	3	+	122957059	123103213	0	26	85,199,235,205,175,158,111,67,103,170,175,94,151,114,75,126,144,42,129,93,111,105,84,72,198,1776,	0,16002,43476,45206,48288,49047,55032,55530,56250,57588,69345,74534,79300,124339,129341,132543,133276,135236,135625,148749,149266,156732,157706,158469,160557,162082,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	122941019	122990769	chr9:122941019-122990769	0	+	122941019	122941019	8553170	5	74,199,235,205,1473,	0,15991,43465,45195,48277,
#Partially deleted in new
chr9	122941019	122986416	chr9:122941019-122986416	0	+	122941019	122941019	8553170	4	74,61,235,202,	0,16129,43465,45195,
#Partially deleted in new
chr9	122941032	122984671	chr9:122941032-122984671	0	+	122957059	122984671	789624	4	56,101,199,187,	0,4299,15978,43452,
#Partially deleted in new
chr9	122941089	122997335	chr9:122941089-122997335	0	+	122957059	122986265	789624	8	4,199,205,175,158,111,67,77,	0,15921,45125,48207,48966,54951,55449,56169,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	122945987	122946094	chr9:122945987-122946094	3	-	122945987	122945987	8553170	1	107,	0,
#Partially deleted in new
chr9	122990162	122996320	chr9:122990162-122996320	0	+	122990162	122990162	8553170	2	51,280,	0,5878,
#Deleted in new
chr9	123029372	123029753	chr9:123029372-123029753	7	-	123029372	123029372	16724991	1	381,	0,
#Partially deleted in new
chr9	123033508	123074310	chr9:123033508-123074310	0	+	123033508	123033508	8553170	5	234,114,75,126,26,	0,31839,36841,40043,40776,
#Deleted in new
chr9	123033642	123035665	chr9:123033642-123035665	1	+	123034566	123035616	789624	2	100,1495,	0,528,
#Partially deleted in new
chr9	123033666	123074317	chr9:123033666-123074317	0	+	123033666	123033666	8553170	5	76,254,75,126,33,	0,31681,36683,39885,40618,
#Deleted in new
chr9	123033684	123034684	chr9:123033684-123034684	0	+	123033684	123033684	8553170	2	58,514,	0,486,
#Deleted in new
chr9	123034526	123035696	chr9:123034526-123035696	3	+	123034566	123035616	789624	1	1170,	0,
#Partially deleted in new
chr9	123061844	123063312	chr9:123061844-123063312	7	-	123061844	123061844	16724991	3	124,509,225,	0,417,1243,
#Partially deleted in new
chr9	123073559	123076999	chr9:123073559-123076999	0	+	123073559	123073559	8553170	4	118,144,42,366,	0,725,2685,3074,
#Partially deleted in new
chr9	123089551	123097753	chr9:123089551-123097753	0	+	123089551	123089551	8553170	3	299,111,13,	0,723,8189,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	123109493	123115477	chr9:123109493-123115477	3	-	123109493	123109493	789624	1	5984,	0,
#Partially deleted in new
chr9	123109499	123122223	chr9:123109499-123122223	0	-	123109499	123109499	8553170	2	254,31,	0,12693,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	123109500	123115477	chr9:123109500-123115477	0	-	123109500	123109500	8553170	1	5977,	0,
#Partially deleted in new
chr9	123109513	123132968	chr9:123109513-123132968	0	-	123122321	123132968	789624	5	240,120,134,45,124,	0,6250,12679,18700,23331,
#Partially deleted in new
chr9	123109556	123132967	chr9:123109556-123132967	0	-	123116012	123132967	789624	4	197,170,45,123,	0,6372,18657,23288,
#Deleted in new
chr9	123111545	123111643	chr9:123111545-123111643	3	-	123111545	123111545	5263520	1	98,	0,
#Partially deleted in new
chr9	123121290	123136136	chr9:123121290-123136136	0	-	123122321	123136136	789624	5	258,134,45,124,96,	0,902,6923,11554,14750,
#Partially deleted in new
chr9	123121630	123184310	chr9:123121630-123184310	1	-	123125596	123184134	0	17	4043,45,124,141,135,159,200,93,112,98,112,96,92,145,166,221,179,	0,6583,11214,14410,14750,17898,25224,26147,36381,36701,37465,38736,39346,48271,52046,57376,62501,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr9	123124708	123268564	chr9:123124708-123268564	3	-	123125596	123184134	0	19	965,45,124,141,135,159,200,93,112,98,112,96,92,145,166,221,167,137,129,	0,3505,8136,11332,11672,14820,22146,23069,33303,33623,34387,35658,36268,45193,48968,54298,59423,112121,143727,
#Partially deleted in new
chr9	123125038	123268576	chr9:123125038-123268576	1	-	123125596	123179188	0	19	635,45,124,141,135,159,200,93,112,98,112,96,92,145,166,221,108,167,141,	0,3175,7806,11002,11342,14490,21816,22739,32973,33293,34057,35328,35938,44863,48638,53968,55829,59093,143397,
#Partially deleted in new
chr9	123125219	123268564	chr9:123125219-123268564	0	-	123173773	123184134	789624	19	454,45,124,141,135,159,200,93,112,98,112,96,92,70,145,158,221,167,129,	0,2994,7625,10821,11161,14309,21635,22558,32792,33112,33876,35147,35757,42969,44682,48457,53787,58912,143216,
#Deleted in new
chr9	123135806	123136503	chr9:123135806-123136503	0	-	123135806	123135806	8553170	2	375,123,	0,574,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	123179006	123213908	chr9:123179006-123213908	0	-	123179006	123184134	789624	4	221,167,124,320,	0,5125,33578,34582,
#Partially deleted in new
chr9	123356169	123374099	chr9:123356169-123374099	1	+	123356260	123374062	0	10	185,324,196,140,186,114,873,509,166,966,	0,6695,9747,10057,11002,11403,13938,14900,16007,16964,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	123356259	123378753	chr9:123356259-123378753	3	+	123356260	123377062	0	13	95,324,196,140,186,114,873,509,166,787,117,127,1916,	0,6605,9657,9967,10912,11313,13848,14810,15917,16874,18319,18957,20578,
#Partially deleted in new
chr9	123368778	123380324	chr9:123368778-123380324	0	+	123368888	123377062	0	9	168,873,509,166,787,117,127,838,362,	0,1329,2291,3398,4355,5800,6438,8059,11184,
#Partially deleted in new
chr9	123379653	123930107	chr9:123379653-123930107	3	-	123381431	123929905	789624	22	2972,259,89,132,57,72,41,88,105,126,102,46,101,111,54,81,70,120,50,44,71,219,	0,4001,23748,60706,71039,72622,75085,77694,78139,177916,203515,229782,250722,272359,287372,291637,297066,378049,389860,412933,499297,550235,
#Partially deleted in new
chr9	123379653	123798515	chr9:123379653-123798515	0	-	123379653	123379653	8553170	18	2972,259,129,89,132,57,72,126,102,46,101,111,54,81,120,50,44,255,	0,4001,8076,23748,60706,71039,72622,177916,203515,229782,250722,272359,287372,291637,378049,389860,412933,418607,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chr9	123400098	123930126	chr9:123400098-123930126	1	-	123401809	123929905	789624	21	1814,89,132,57,72,41,88,105,126,102,46,101,111,54,81,70,120,50,44,71,238,	0,3303,40261,50594,52177,54640,57249,57694,157471,183070,209337,230277,251914,266927,271192,276621,357604,369415,392488,478852,529790,
#Deleted in new
chr9	123401547	123403573	chr9:123401547-123403573	0	-	123401547	123401547	8553170	2	365,172,	0,1854,
#Partially deleted in new
chr9	123401809	123676791	chr9:123401809-123676791	1	-	123401809	123676791	789624	16	103,89,132,57,72,41,88,105,126,102,46,101,111,54,81,72,	0,1592,38550,48883,50466,52929,55538,55983,155760,181359,207626,228566,250203,265216,269481,274910,
#Deleted in new
chr9	123402524	123402603	chr9:123402524-123402603	3	-	123402524	123402524	5263520	1	79,	0,
#Partially deleted in new
chr9	123403474	123609453	chr9:123403474-123609453	0	-	123403474	123403474	8553170	11	16,132,57,72,41,85,88,105,126,102,18,	0,36885,47218,48801,51264,53372,53873,54318,154095,179694,205961,
#Partially deleted in new
chr9	123411292	123583217	chr9:123411292-123583217	0	-	123411292	123411292	8553170	9	537,132,57,72,41,88,105,126,49,	0,29067,39400,40983,43446,46055,46500,146277,171876,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr9	123413270	123930152	chr9:123413270-123930152	1	-	123414579	123878992	789624	19	1318,132,57,72,41,88,105,126,102,46,101,111,54,81,70,120,44,71,264,	0,27089,37422,39005,41468,44077,44522,144299,169898,196165,217105,238742,253755,258020,263449,344432,379316,465680,516618,
#Partially deleted in new
chr9	123437646	123462023	chr9:123437646-123462023	0	-	123437646	123437646	8553170	8	186,132,57,72,41,88,105,110,	0,2713,13046,14629,17092,19701,20146,24267,
#Partially deleted in new
chr9	123439726	123457378	chr9:123439726-123457378	0	-	123439726	123439726	8553170	5	463,132,72,41,31,	0,633,12549,15012,17621,
#Deleted in new
chr9	123485528	123485622	chr9:123485528-123485622	3	-	123485528	123485528	5263520	1	94,	0,
#Deleted in new
chr9	123491883	123493156	chr9:123491883-123493156	3	+	123491883	123491883	8553170	2	228,494,	0,779,
#Partially deleted in new
chr9	123569544	123757759	chr9:123569544-123757759	0	-	123569544	123569544	8553170	8	51,102,46,101,111,54,81,57,	0,13624,39891,60831,82468,97481,101746,188158,
#Partially deleted in new
chr9	123630395	123652291	chr9:123630395-123652291	0	-	123630395	123630395	8553170	2	81,279,	0,21617,
#Partially deleted in new
chr9	123736436	123751941	chr9:123736436-123751941	3	+	123736436	123736436	8553170	2	30,758,	0,14747,
#Partially deleted in new
chr9	123759219	123759775	chr9:123759219-123759775	7	+	123759219	123759219	16724991	2	189,57,	0,499,
#Deleted in new
chr9	123843035	123843686	chr9:123843035-123843686	7	+	123843035	123843035	16724991	1	651,	0,
#Partially deleted in new
chr9	124001669	124015361	chr9:124001669-124015361	0	+	124013963	124015361	789624	3	28,203,240,	0,12291,13452,
#Deleted in new
chr9	124006276	124009396	chr9:124006276-124009396	3	-	124006276	124006276	789624	2	1815,331,	0,2789,
#Partially deleted in new
chr9	124010529	124011114	chr9:124010529-124011114	3	+	124010529	124010529	8553170	2	300,160,	0,425,
#Partially deleted in new
chr9	124011609	124033301	chr9:124011609-124033301	3	+	124012348	124032707	789624	5	859,203,404,206,882,	0,2351,3512,9489,20810,
#Partially deleted in new
chr9	124012356	124032884	chr9:124012356-124032884	0	+	124012356	124032707	789624	5	112,203,428,206,465,	0,1604,2741,8742,20063,
#Partially deleted in new
chr9	124015396	124033301	chr9:124015396-124033301	0	+	124015396	124021830	789624	4	129,206,49,882,	0,5702,6422,17023,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	124031623	124032524	chr9:124031623-124032524	3	-	124031623	124031623	8553170	3	250,96,235,	0,348,666,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	124257605	124353307	chr9:124257605-124353307	3	+	124301964	124350947	789624	10	116,119,141,63,111,109,108,95,114,2471,	0,44330,54903,56317,63853,68724,69732,81965,90103,93231,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	124257605	124352438	chr9:124257605-124352438	1	+	124257696	124350947	789624	10	116,119,141,63,111,109,108,95,114,1602,	0,44330,54903,56317,63853,68724,69732,81965,90103,93231,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	124257962	124353307	chr9:124257962-124353307	1	+	124292940	124350947	789624	11	123,165,119,141,63,111,109,108,95,114,2471,	0,34886,43973,54546,55960,63496,68367,69375,81608,89746,92874,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	124257969	124353307	chr9:124257969-124353307	1	+	124301964	124350947	789624	10	116,119,141,63,111,109,108,95,114,2471,	0,43966,54539,55953,63489,68360,69368,81601,89739,92867,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	124258250	124352438	chr9:124258250-124352438	1	+	124301964	124350947	789624	10	111,119,141,63,111,109,108,95,114,1602,	0,43685,54258,55672,63208,68079,69087,81320,89458,92586,
#Partially deleted in new
chr9	124258259	124339607	chr9:124258259-124339607	0	+	124301964	124339607	789624	8	102,119,141,63,111,109,108,37,	0,43676,54249,55663,63199,68070,69078,81311,
#Partially deleted in new
chr9	124258260	124347797	chr9:124258260-124347797	0	+	124301964	124347797	789624	7	101,119,111,109,108,95,89,	0,43675,63198,68069,69077,81310,89448,
#Partially deleted in new
chr9	124259249	124261156	chr9:124259249-124261156	3	-	124259249	124259249	8553170	2	245,63,	0,1844,
#Partially deleted in new
chr9	124261472	124327445	chr9:124261472-124327445	0	+	124301964	124327445	789624	7	107,119,141,63,111,109,108,	0,40463,51036,52450,59986,64857,65865,
#Partially deleted in new
chr9	124261472	124339614	chr9:124261472-124339614	0	+	124301964	124339614	789624	8	111,119,141,63,111,109,108,44,	0,40463,51036,52450,59986,64857,65865,78098,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	124262875	124265809	chr9:124262875-124265809	3	+	124262875	124262875	8553170	2	143,230,	0,2704,
#Partially deleted in new
chr9	124286439	124326405	chr9:124286439-124326405	0	+	124292940	124326405	789624	7	51,165,119,141,63,111,76,	0,6409,15496,26069,27483,35019,39890,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	124291970	124352438	chr9:124291970-124352438	1	+	124301964	124350947	789624	10	118,119,141,63,111,109,108,95,114,1602,	0,9965,20538,21952,29488,34359,35367,47600,55738,58866,
#Partially deleted in new
chr9	124291978	124339608	chr9:124291978-124339608	0	+	124301964	124339608	789624	8	110,119,141,63,111,109,108,38,	0,9957,20530,21944,29480,34351,35359,47592,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	124292419	124352438	chr9:124292419-124352438	1	+	124292493	124350947	789624	10	120,119,141,63,111,109,108,95,114,1602,	0,9516,20089,21503,29039,33910,34918,47151,55289,58417,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	124292940	124352438	chr9:124292940-124352438	1	+	124292940	124350947	789624	10	73,119,141,63,111,109,108,95,114,1602,	0,8995,19568,20982,28518,33389,34397,46630,54768,57896,
#Partially deleted in new
chr9	124299984	124326438	chr9:124299984-124326438	0	+	124301964	124326438	789624	6	173,119,141,63,111,109,	0,1951,12524,13938,21474,26345,
#Partially deleted in new
chr9	124353465	124415439	chr9:124353465-124415439	3	-	124353597	124415425	0	8	244,152,59,116,141,98,94,76,	0,3298,31132,51851,58886,60442,61376,61898,
#Partially deleted in new
chr9	124353465	124415291	chr9:124353465-124415291	0	-	124353465	124353465	8553170	7	244,152,59,141,98,94,179,	0,3298,31132,58886,60442,61376,61647,
#Deleted in new
chr9	124383595	124384656	chr9:124383595-124384656	0	-	124383595	124383595	8553170	3	355,132,59,	0,481,1002,
#Deleted in new
chr9	124383621	124384656	chr9:124383621-124384656	0	-	124383621	124383621	8553170	2	329,59,	0,976,
#Partially deleted in new
chr9	124396759	124415444	chr9:124396759-124415444	0	-	124396759	124415425	789624	7	88,32,116,141,98,94,81,	0,1681,8557,15592,17148,18082,18604,
#Partially deleted in new
chr9	124412399	124415307	chr9:124412399-124415307	0	-	124412399	124412399	8553170	4	93,98,94,177,	0,1508,2442,2731,
#Deleted in new
chr9	124451424	124452579	chr9:124451424-124452579	0	+	124451424	124451424	8553170	4	11,93,64,294,	0,185,666,861,
#Partially deleted in new
chr9	124451690	124457484	chr9:124451690-124457484	0	+	124451690	124451690	8553170	9	12,64,213,642,99,86,285,112,13,	0,400,819,1344,2308,2793,3152,4931,5781,
#Partially deleted in new
chr9	124452090	124478589	chr9:124452090-124478589	3	+	124452090	124476691	789624	22	68,213,642,99,86,285,112,135,124,106,156,104,103,154,134,116,121,42,45,59,31,309,	0,419,944,1908,2393,2752,4531,5381,6022,6525,14167,15630,15997,16428,17131,17341,18403,23355,23480,24266,24588,26190,
#Partially deleted in new
chr9	124453510	124469515	chr9:124453510-124469515	0	+	124453510	124466406	789624	13	166,86,255,112,135,124,106,127,104,103,154,134,84,	0,973,1332,3111,3961,4602,5105,12776,14210,14577,15008,15711,15921,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	124465209	124467340	chr9:124465209-124467340	0	+	124465209	124465209	8553170	1	2131,	0,
#Partially deleted in new
chr9	124466279	124475615	chr9:124466279-124475615	0	+	124466279	124469462	789624	9	134,104,103,154,134,124,121,42,45,	0,1441,1808,2239,2942,3144,4214,9166,9291,
#Partially deleted in new
chr9	124468557	124478589	chr9:124468557-124478589	0	+	124468557	124470504	789624	7	115,121,42,45,59,31,309,	0,1936,6888,7013,7799,8121,9723,
#Partially deleted in new
chr9	124481235	124507420	chr9:124481235-124507420	1	-	124482757	124503395	789624	6	1770,148,626,142,117,172,	0,9845,18854,21843,22058,26013,
#Partially deleted in new
chr9	124481236	124507430	chr9:124481236-124507430	3	-	124482757	124503395	0	7	1769,148,120,626,142,117,182,	0,9844,11793,18853,21842,22057,26012,
#Partially deleted in new
chr9	124482727	124500986	chr9:124482727-124500986	0	-	124482757	124500986	789624	5	278,148,120,183,39,	0,8353,10302,17362,18220,
#Partially deleted in new
chr9	124500426	124507235	chr9:124500426-124507235	0	-	124500426	124503395	789624	4	289,142,117,278,	0,2652,2867,6531,
#Deleted in new
chr9	124514937	124516056	chr9:124514937-124516056	3	-	124514937	124514937	8553170	2	147,119,	0,1000,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	124517274	124771277	chr9:124517274-124771277	3	-	124522704	124771119	789624	10	5519,153,122,255,228,155,56,243,42,258,	0,7446,9504,18603,20817,22758,26527,37053,216033,253745,
#Partially deleted in new
chr9	124522423	124771297	chr9:124522423-124771297	1	-	124522704	124771119	789624	10	370,153,122,255,228,155,56,231,42,278,	0,2297,4355,13454,15668,17609,21378,31904,210884,248596,
#Partially deleted in new
chr9	124522425	124771310	chr9:124522425-124771310	1	-	124522704	124771119	789624	10	368,153,122,255,225,155,56,231,42,291,	0,2295,4353,13452,15666,17607,21376,31902,210882,248594,
#Partially deleted in new
chr9	124522466	124771287	chr9:124522466-124771287	1	-	124522704	124771119	789624	10	327,153,122,255,225,155,56,243,42,268,	0,2254,4312,13411,15625,17566,21335,31861,210841,248553,
#Partially deleted in new
chr9	124538091	124595808	chr9:124538091-124595808	0	-	124538091	124595764	789624	5	228,155,56,243,60,	0,1941,5710,16236,57657,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	124598706	124599580	chr9:124598706-124599580	7	-	124598706	124598706	16724991	2	451,156,	0,718,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	124607158	124607458	chr9:124607158-124607458	3	+	124607158	124607158	8553170	1	300,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	124658466	124698631	chr9:124658466-124698631	3	+	124658466	124658466	789624	2	275,387,	0,39778,
#Deleted in new
chr9	124692441	124692551	chr9:124692441-124692551	3	+	124692441	124692441	5263520	1	110,	0,
#Deleted in new
chr9	124693709	124693798	chr9:124693709-124693798	3	+	124693709	124693709	5263520	1	89,	0,
#Partially deleted in new
chr9	124770122	124772927	chr9:124770122-124772927	3	+	124770122	124770122	8553170	3	184,207,226,	0,1444,2579,
#Partially deleted in new
chr9	124777157	124804236	chr9:124777157-124804236	0	+	124777270	124804236	789624	5	203,264,207,250,143,	0,9817,22127,24256,26936,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	124777270	124814878	chr9:124777270-124814878	3	+	124777270	124810412	789624	8	90,264,108,207,250,249,186,5071,	0,9704,17753,22014,24143,26823,30510,32537,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	124800873	124814885	chr9:124800873-124814885	1	+	124801047	124810412	789624	5	201,250,249,186,5078,	0,540,3220,6907,8934,
#Partially deleted in new
chr9	124853416	124857890	chr9:124853416-124857890	1	+	124853531	124857630	789624	9	184,121,117,98,81,132,150,48,392,	0,788,2217,2444,2823,3052,3315,3947,4082,
#Partially deleted in new
chr9	124853416	124857890	chr9:124853416-124857890	1	+	124854229	124857630	789624	8	184,121,162,81,132,150,48,392,	0,788,2380,2823,3052,3315,3947,4082,
#Partially deleted in new
chr9	124853475	124857881	chr9:124853475-124857881	3	+	124853531	124857630	789624	9	125,121,117,98,81,132,150,48,380,	0,729,2158,2385,2764,2993,3256,3888,4026,
#Partially deleted in new
chr9	124857879	124861915	chr9:124857879-124861915	1	-	124858468	124861912	789624	5	188,80,82,137,6,	0,578,2303,3539,4030,
#Partially deleted in new
chr9	124857882	124861936	chr9:124857882-124861936	0	-	124857882	124857882	8553170	3	185,82,518,	0,2300,3536,
#Partially deleted in new
chr9	124857882	124861935	chr9:124857882-124861935	0	-	124858468	124861912	789624	5	185,262,82,137,26,	0,393,2300,3536,4027,
#Partially deleted in new
chr9	124857883	124861961	chr9:124857883-124861961	3	-	124857917	124861912	0	4	184,82,137,52,	0,2299,3535,4026,
#Partially deleted in new
chr9	124858468	124861961	chr9:124858468-124861961	1	-	124858468	124861912	789624	4	69,82,137,52,	0,1714,2950,3441,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	124860978	124861981	chr9:124860978-124861981	0	-	124860978	124860978	8553170	2	577,72,	0,931,
#Partially deleted in new
chr9	124862129	124877733	chr9:124862129-124877733	3	+	124869290	124876940	789624	6	269,120,1012,73,177,856,	0,1858,6298,11562,12845,14748,
#Partially deleted in new
chr9	124869204	124877717	chr9:124869204-124877717	1	+	124869290	124876940	789624	4	235,73,177,840,	0,4487,5770,7673,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	124872588	124877401	chr9:124872588-124877401	0	+	124872588	124872588	8553170	3	1176,177,524,	0,2386,4289,
#Partially deleted in new
chr9	124878356	124941099	chr9:124878356-124941099	3	-	124880529	124938711	789624	23	2254,87,171,60,144,161,103,90,96,150,96,96,126,112,170,129,33,98,75,91,290,50,129,	0,2814,3427,4153,9896,10786,11077,12032,20192,20972,22095,30020,33544,42772,43366,44738,48352,49831,50859,52959,60220,61749,62614,
#Partially deleted in new
chr9	124878377	124929268	chr9:124878377-124929268	0	-	124912015	124929268	789624	18	2233,87,171,60,144,161,103,90,96,150,96,96,126,181,129,33,98,53,	0,2793,3406,4132,9875,10765,11056,12011,20171,20951,22074,29999,33523,43334,44717,48331,49810,50838,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	124887409	124887549	chr9:124887409-124887549	3	-	124887409	124887409	8553170	1	140,	0,
#Partially deleted in new
chr9	124889178	124921781	chr9:124889178-124921781	0	-	124899393	124921781	789624	10	125,103,90,96,105,23,96,126,112,59,	0,255,1210,9370,10150,11346,19198,22722,31950,32544,
#Partially deleted in new
chr9	124900140	124911919	chr9:124900140-124911919	0	-	124900140	124900140	8553170	3	407,96,19,	0,8236,11760,
#Partially deleted in new
chr9	124928248	124948013	chr9:124928248-124948013	0	-	124928248	124938711	789624	5	37,75,91,290,96,	0,967,3067,10328,19669,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr9	124942607	125143496	chr9:124942607-125143496	3	-	124952806	125143437	789624	18	10346,101,174,73,82,100,79,102,102,153,99,97,99,87,96,132,45,112,	0,28762,29063,33506,52326,57283,59357,60506,60861,76191,76499,78065,84204,85784,87036,113268,200025,200777,
#Deleted in new
chr9	124947606	124948492	chr9:124947606-124948492	0	-	124947606	124947606	8553170	1	886,	0,
#Partially deleted in new
chr9	124952787	125143496	chr9:124952787-125143496	1	-	124952806	125143437	789624	19	166,101,174,73,82,100,79,102,102,153,99,97,99,87,96,132,69,45,112,	0,18582,18883,23326,42146,47103,49177,50326,50681,66011,66319,67885,74024,75604,76856,103088,113202,189845,190597,
#Partially deleted in new
chr9	124952787	125143487	chr9:124952787-125143487	0	-	124971688	125143437	789624	18	166,101,92,73,82,100,79,102,102,153,99,97,99,87,96,132,45,103,	0,18582,18883,23326,42146,47103,49177,50326,50681,66011,66319,67885,74024,75604,76856,103088,189845,190597,
#Partially deleted in new
chr9	124952868	124999923	chr9:124952868-124999923	0	-	124975312	124999923	789624	7	85,101,174,143,73,82,33,	0,18501,18802,22378,23245,42065,47022,
#Deleted in new
chr9	124968293	124968840	chr9:124968293-124968840	7	-	124968293	124968293	16724991	1	547,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	124971257	124976186	chr9:124971257-124976186	0	-	124974250	124976186	789624	4	213,174,102,73,	0,413,2917,4856,
#Partially deleted in new
chr9	124999910	125003690	chr9:124999910-125003690	0	-	124999910	124999910	8553170	4	80,79,102,222,	0,2054,3203,3558,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	125142253	125143506	chr9:125142253-125143506	0	-	125142253	125142253	8553170	2	424,122,	0,1131,
#Partially deleted in new
chr9	125146572	125189818	chr9:125146572-125189818	3	-	125149672	125189718	789624	7	3349,210,80,142,66,96,175,	0,6960,7333,11668,14268,24512,43071,
#Partially deleted in new
chr9	125146573	125189939	chr9:125146573-125189939	1	-	125149672	125189718	789624	6	3348,210,80,142,96,296,	0,6959,7332,11667,24511,43070,
#Partially deleted in new
chr9	125146573	125189939	chr9:125146573-125189939	1	-	125149672	125189718	789624	8	3348,210,80,142,66,96,29,378,	0,6959,7332,11667,14267,24511,42345,42988,
#Deleted in new
chr9	125150652	125151589	chr9:125150652-125151589	7	+	125150652	125150652	16724991	1	937,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	125153953	125189783	chr9:125153953-125189783	0	-	125153953	125171947	789624	6	32,142,66,96,93,140,	0,4287,6887,17131,17955,35690,
#Partially deleted in new
chr9	125194648	125195821	chr9:125194648-125195821	7	-	125194648	125194648	16724991	2	265,588,	0,585,
#Partially deleted in new
chr9	125200541	125234158	chr9:125200541-125234158	1	+	125203013	125233980	789624	8	36,127,59,158,162,150,150,471,	0,238,2466,7022,19997,27368,32054,33146,
#Partially deleted in new
chr9	125200541	125234158	chr9:125200541-125234158	3	+	125203013	125233980	789624	9	36,127,59,158,153,162,150,150,471,	0,238,2466,7022,12828,19997,27368,32054,33146,
#Partially deleted in new
chr9	125200541	125234158	chr9:125200541-125234158	1	+	125203013	125220568	789624	10	36,127,59,158,153,71,162,150,150,471,	0,238,2466,7022,12828,19785,19997,27368,32054,33146,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	125200544	125222387	chr9:125200544-125222387	1	+	125203013	125220568	789624	7	33,127,59,158,153,71,1849,	0,235,2463,7019,12825,19782,19994,
#Partially deleted in new
chr9	125200602	125234055	chr9:125200602-125234055	1	+	125203013	125233980	789624	8	304,59,158,153,162,150,150,368,	0,2405,6961,12767,19936,27307,31993,33085,
#Partially deleted in new
chr9	125200604	125220658	chr9:125200604-125220658	0	+	125200604	125220658	789624	4	302,158,153,120,	0,6959,12765,19934,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	125234852	125241330	chr9:125234852-125241330	3	-	125236591	125241126	0	8	2302,168,238,391,113,138,232,326,	0,3288,3737,4088,4568,5319,5823,6152,
#Partially deleted in new
chr9	125241662	125257018	chr9:125241662-125257018	3	+	125241662	125241662	8553170	3	401,94,55,	0,12915,15301,
#Partially deleted in new
chr9	125261793	125341864	chr9:125261793-125341864	0	+	125298921	125332515	789624	16	166,217,844,87,135,190,161,130,126,174,141,92,120,78,371,688,	0,37096,40189,43269,45619,45897,50658,59639,62004,64622,68284,70132,70716,75224,75427,79383,
#Partially deleted in new
chr9	125261809	125302148	chr9:125261809-125302148	0	+	125298921	125302148	789624	4	150,49,217,166,	0,7126,37080,40173,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	125261828	125309300	chr9:125261828-125309300	1	+	125298921	125307933	789624	8	131,49,117,217,844,87,135,1610,	0,7107,33629,37061,40154,43234,45584,45862,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr9	125261831	125367207	chr9:125261831-125367207	3	+	125298921	125362746	789624	25	128,217,844,87,135,190,161,130,126,174,141,135,120,78,371,88,123,130,110,160,188,214,73,198,4602,	0,37058,40151,43231,45581,45859,50620,59601,61966,64584,68246,70094,70678,75186,75389,79345,84987,87558,88463,88881,92822,93812,97588,98696,100774,
#Partially deleted in new
chr9	125261842	125363105	chr9:125261842-125363105	1	+	125298921	125362746	789624	25	117,217,844,87,135,190,161,67,126,174,141,135,120,78,371,88,123,130,110,160,188,214,73,198,500,	0,37047,40140,43220,45570,45848,50609,59590,61955,64573,68235,70083,70667,75175,75378,79334,84976,87547,88452,88870,92811,93801,97577,98685,100763,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr9	125261867	125363328	chr9:125261867-125363328	1	+	125298921	125362746	789624	28	92,49,117,217,844,87,135,190,161,130,126,174,141,135,120,78,371,88,81,177,130,110,160,188,214,73,198,723,	0,7068,33590,37022,40115,43195,45545,45823,50584,59565,61930,64548,68210,70058,70642,75150,75353,79309,80351,84951,87522,88427,88845,92786,93776,97552,98660,100738,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chr9	125261910	125364119	chr9:125261910-125364119	1	+	125298921	125362746	789624	28	49,49,117,217,844,87,135,190,161,130,126,174,141,135,120,78,371,88,81,123,130,110,160,188,214,73,198,1514,	0,7025,33547,36979,40072,43152,45502,45780,50541,59522,61887,64505,68167,70015,70599,75107,75310,79266,80308,84908,87479,88384,88802,92743,93733,97509,98617,100695,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr9	125261910	125341264	chr9:125261910-125341264	0	+	125298921	125341264	789624	17	49,117,217,844,87,135,190,161,130,126,174,141,135,120,78,371,88,	0,33547,36979,40072,43152,45502,45780,50541,59522,61887,64505,68167,70015,70599,75107,75310,79266,
#Partially deleted in new
chr9	125261954	125269054	chr9:125261954-125269054	0	+	125261954	125261954	8553170	3	5,150,119,	0,1596,6981,
#Deleted in new
chr9	125263844	125264090	chr9:125263844-125264090	7	-	125263844	125263844	16724991	1	246,	0,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr9	125298885	125365010	chr9:125298885-125365010	1	+	125298921	125362746	789624	25	221,844,87,135,190,161,130,126,174,141,135,120,78,371,88,81,177,130,110,160,188,214,73,198,2405,	0,3097,6177,8527,8805,13566,22547,24912,27530,31192,33040,33624,38132,38335,42291,43333,47933,50504,51409,51827,55768,56758,60534,61642,63720,
#Partially deleted in new
chr9	125298921	125362746	chr9:125298921-125362746	1	+	125298921	125362746	789624	25	185,844,87,135,190,161,67,126,174,141,135,120,78,371,88,81,123,130,110,160,188,214,73,198,141,	0,3061,6141,8491,8769,13530,22511,24876,27494,31156,33004,33588,38096,38299,42255,43297,47897,50468,51373,51791,55732,56722,60498,61606,63684,
#Partially deleted in new
chr9	125302108	125342232	chr9:125302108-125342232	1	+	125302220	125332515	789624	16	718,87,135,190,161,130,126,174,141,47,87,120,78,371,88,14,	0,2954,5304,5582,10343,19324,21689,24307,27969,29817,29865,30401,34909,35112,39068,40110,
#Partially deleted in new
chr9	125302209	125342255	chr9:125302209-125342255	0	+	125302209	125342255	789624	14	617,87,135,190,161,130,126,174,141,135,120,371,88,37,	0,2853,5203,5481,10242,19223,21588,24206,27868,29716,30300,35011,38967,40009,
#Partially deleted in new
chr9	125302306	125342234	chr9:125302306-125342234	0	+	125302306	125342234	789624	16	520,87,135,190,81,161,67,126,174,141,135,120,78,371,88,16,	0,2756,5106,5384,7622,10145,19126,21491,24109,27771,29619,30203,34711,34914,38870,39912,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	125303919	125304026	chr9:125303919-125304026	3	-	125303919	125303919	8553170	1	107,	0,
#Partially deleted in new
chr9	125336708	125337408	chr9:125336708-125337408	0	+	125336708	125336708	8553170	2	387,188,	0,512,
#Deleted in new
chr9	125341234	125342106	chr9:125341234-125342106	0	+	125341234	125341234	8553170	2	30,355,	0,517,
#Partially deleted in new
chr9	125345889	125363025	chr9:125345889-125363025	0	+	125345889	125345889	8553170	9	1052,130,110,160,188,214,73,198,420,	0,3500,4405,4823,8764,9754,13530,14638,16716,
#Partially deleted in new
chr9	125354696	125359847	chr9:125354696-125359847	0	+	125354696	125354696	8553170	3	145,214,428,	0,947,4723,
#Partially deleted in new
chr9	125372324	125372766	chr9:125372324-125372766	7	-	125372324	125372324	16724991	1	442,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	125417304	125417586	chr9:125417304-125417586	3	+	125417304	125417304	8553170	1	282,	0,
#Partially deleted in new
chr9	125437392	125707231	chr9:125437392-125707231	1	-	125438886	125672574	0	11	1620,98,138,108,110,177,173,149,90,328,261,	0,7108,30579,68917,105666,122240,148162,220258,232425,234923,269578,
#Partially deleted in new
chr9	125437393	125707234	chr9:125437393-125707234	1	-	125438886	125672574	0	12	1619,98,138,141,108,110,177,173,149,90,328,264,	0,7107,30578,47049,68916,105665,122239,148161,220257,232424,234922,269577,
#Partially deleted in new
chr9	125437393	125707203	chr9:125437393-125707203	3	-	125438886	125672574	0	11	1619,98,138,141,110,177,173,149,90,328,233,	0,7107,30578,47049,105665,122239,148161,220257,232424,234922,269577,
#Partially deleted in new
chr9	125437393	125672643	chr9:125437393-125672643	1	-	125438886	125672574	0	11	1619,98,138,141,108,110,177,173,149,90,328,	0,7107,30578,47049,68916,105665,122239,148161,220257,232424,234922,
#Partially deleted in new
chr9	125437393	125707212	chr9:125437393-125707212	1	-	125438886	125585649	0	11	1619,98,138,141,108,110,177,173,149,90,242,	0,7107,30578,47049,68916,105665,122239,148161,220257,232424,269577,
#Partially deleted in new
chr9	125437393	125707234	chr9:125437393-125707234	1	-	125438886	125585649	0	10	1619,98,138,141,108,110,177,173,149,264,	0,7107,30578,47049,68916,105665,122239,148161,220257,269577,
#Partially deleted in new
chr9	125438468	125484501	chr9:125438468-125484501	0	-	125438886	125484501	789624	3	544,98,59,	0,6032,45974,
#Partially deleted in new
chr9	125438468	125471905	chr9:125438468-125471905	0	-	125438468	125438468	8553170	4	544,98,138,823,	0,6032,29503,32614,
#Partially deleted in new
chr9	125438654	125595646	chr9:125438654-125595646	0	-	125447410	125585649	789624	9	358,98,163,138,141,110,177,173,137,	0,5846,8670,29317,45788,104404,120978,146900,156855,
#Partially deleted in new
chr9	125438706	125451101	chr9:125438706-125451101	0	-	125438706	125438706	8553170	3	306,98,44,	0,5794,12351,
#Partially deleted in new
chr9	125438812	125506366	chr9:125438812-125506366	0	-	125438812	125438812	8553170	7	200,98,138,155,103,141,57,	0,5688,29159,32270,39267,45630,67497,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	125444500	125650417	chr9:125444500-125650417	0	-	125444500	125585649	789624	8	98,138,141,110,177,173,93,54,	0,23471,39942,98558,115132,141054,155334,205863,
#Partially deleted in new
chr9	125505943	125650461	chr9:125505943-125650461	0	-	125505943	125505943	8553170	5	474,110,177,173,98,	0,37115,53689,79611,144420,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	125512901	125513207	chr9:125512901-125513207	3	-	125512901	125512901	8553170	1	306,	0,
#Partially deleted in new
chr9	125521467	125707231	chr9:125521467-125707231	1	-	125521751	125672574	0	8	298,110,177,173,149,90,328,261,	0,21591,38165,64087,136183,148350,150848,185503,
#Partially deleted in new
chr9	125543058	125707177	chr9:125543058-125707177	0	-	125543058	125585649	789624	5	110,177,173,149,207,	0,16574,42496,114592,163912,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	125559113	125585627	chr9:125559113-125585627	0	-	125559113	125559113	8553170	2	696,73,	0,26441,
#Partially deleted in new
chr9	125559782	125657710	chr9:125559782-125657710	0	-	125559782	125657710	789624	4	27,173,141,60,	0,25772,92334,97868,
#Partially deleted in new
chr9	125565365	125669845	chr9:125565365-125669845	0	-	125565365	125565365	8553170	4	372,173,149,28,	0,20189,92285,104452,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	125567578	125573023	chr9:125567578-125573023	3	+	125567578	125567578	8553170	3	415,89,129,	0,1182,5316,
#Deleted in new
chr9	125595668	125596628	chr9:125595668-125596628	7	+	125595668	125595668	16724991	1	960,	0,
#Partially deleted in new
chr9	125657668	125707198	chr9:125657668-125707198	0	-	125657668	125672574	789624	4	131,90,244,228,	0,12149,14731,49302,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	125669886	125707202	chr9:125669886-125707202	0	-	125669886	125672574	789624	4	21,328,188,232,	0,2429,26330,37084,
#Partially deleted in new
chr9	125743753	125745740	chr9:125743753-125745740	3	-	125743753	125743753	789624	2	184,325,	0,1662,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	125744346	125746552	chr9:125744346-125746552	0	-	125744346	125744346	8553170	1	2206,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	125744376	125746552	chr9:125744376-125746552	0	-	125744376	125744376	8553170	1	2176,	0,
#Partially deleted in new
chr9	125747344	125967377	chr9:125747344-125967377	1	+	125747453	125963058	789624	8	309,74,242,191,136,166,90,1547,	0,1205,168341,182310,188127,213339,215667,218486,
#Partially deleted in new
chr9	125747373	125967377	chr9:125747373-125967377	1	+	125747453	125965923	789624	10	280,74,242,191,136,63,166,113,90,1547,	0,1176,168312,182281,188098,202004,213310,214728,215638,218457,
#Partially deleted in new
chr9	125747373	125797465	chr9:125747373-125797465	0	+	125747373	125747373	8553170	3	280,74,71,	0,1176,50021,
#Partially deleted in new
chr9	125747437	125967377	chr9:125747437-125967377	3	+	125747453	125965923	789624	9	216,74,242,191,136,166,113,90,1547,	0,1112,168248,182217,188034,213246,214664,215574,218393,
#Partially deleted in new
chr9	125747453	125965990	chr9:125747453-125965990	0	+	125747453	125929662	789624	8	200,74,191,136,166,113,90,160,	0,1096,182201,188018,213230,214648,215558,218377,
#Partially deleted in new
chr9	125747453	125965923	chr9:125747453-125965923	0	+	125747453	125929662	789624	7	200,74,191,136,166,90,93,	0,1096,182201,188018,213230,215558,218377,
#Partially deleted in new
chr9	125748181	125929845	chr9:125748181-125929845	0	+	125748574	125929845	789624	3	442,242,191,	0,167504,181473,
#Partially deleted in new
chr9	125748198	125967377	chr9:125748198-125967377	1	+	125748574	125965923	789624	9	230,74,242,191,136,166,113,90,1547,	0,351,167487,181456,187273,212485,213903,214813,217632,
#Deleted in new
chr9	125748930	125749537	chr9:125748930-125749537	0	+	125748930	125748930	8553170	1	607,	0,
#Partially deleted in new
chr9	125843712	125965940	chr9:125843712-125965940	0	+	125843712	125843712	8553170	7	100,242,191,136,166,90,110,	0,71973,85942,91759,116971,119299,122118,
#Partially deleted in new
chr9	125843734	125915869	chr9:125843734-125915869	0	+	125843734	125843734	8553170	3	78,417,184,	0,831,71951,
#Partially deleted in new
chr9	125865270	125935531	chr9:125865270-125935531	0	+	125865270	125935531	789624	4	35,242,191,60,	0,50415,64384,70201,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	126057579	126159613	chr9:126057579-126159613	3	+	126057579	126057579	8553170	2	235,81,	0,101953,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	126270120	126275918	chr9:126270120-126275918	3	-	126270120	126270120	789624	3	1872,158,72,	0,2122,5726,
#Partially deleted in new
chr9	126326848	126507041	chr9:126326848-126507041	3	+	126326929	126503263	0	10	162,123,108,97,130,123,95,56,60,3865,	0,13659,54215,59713,65217,68726,95005,154520,157124,176328,
#Partially deleted in new
chr9	126326861	126397633	chr9:126326861-126397633	1	+	126326929	126395701	0	6	149,123,108,97,130,2059,	0,13646,54202,59700,65204,68713,
#Partially deleted in new
chr9	126335218	126395697	chr9:126335218-126395697	0	+	126335371	126395697	789624	6	189,123,108,97,130,123,	0,5289,45845,51343,56847,60356,
#Partially deleted in new
chr9	126395639	126448409	chr9:126395639-126448409	0	+	126395639	126395639	8553170	3	58,95,268,	0,26214,52502,
#Deleted in new
chr9	126408040	126408410	chr9:126408040-126408410	3	-	126408040	126408040	8553170	1	370,	0,
#Partially deleted in new
chr9	126421853	126448409	chr9:126421853-126448409	0	+	126421853	126421853	8553170	2	95,384,	0,26172,
#Deleted in new
chr9	126426892	126426970	chr9:126426892-126426970	3	+	126426892	126426892	8553170	1	78,	0,
#Partially deleted in new
chr9	126480812	126507041	chr9:126480812-126507041	0	+	126480812	126480812	8553170	3	612,60,3865,	0,3160,22364,
#Deleted in new
chr9	126516416	126518808	chr9:126516416-126518808	3	+	126516416	126516416	8553170	2	265,454,	0,1938,
#Deleted in new
chr9	126518839	126520773	chr9:126518839-126520773	3	+	126518839	126518839	8553170	1	1934,	0,
#Deleted in new
chr9	126527617	126530343	chr9:126527617-126530343	3	+	126527617	126527617	8553170	2	179,160,	0,2566,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	126589593	126613700	chr9:126589593-126613700	3	-	126589593	126589593	8553170	3	63,134,252,	0,816,23855,
#Partially deleted in new
chr9	126608112	126612519	chr9:126608112-126612519	0	-	126608112	126608112	8553170	2	349,74,	0,4333,
#Partially deleted in new
chr9	126608277	126613699	chr9:126608277-126613699	1	-	126608277	126608277	8553170	3	184,71,251,	0,866,5171,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	126614442	126701032	chr9:126614442-126701032	1	+	126614449	126696451	789624	8	146,187,233,182,78,100,144,4739,	0,940,76393,78699,79081,79303,81396,81851,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	126614442	126701032	chr9:126614442-126701032	3	+	126614449	126696451	789624	8	146,187,233,182,78,67,165,4739,	0,940,76393,78699,79081,79303,81396,81851,
#Partially deleted in new
chr9	126614442	126696451	chr9:126614442-126696451	1	+	126614449	126696451	789624	8	146,187,233,182,78,67,144,158,	0,940,76393,78699,79081,79303,81396,81851,
#Partially deleted in new
chr9	126614468	126696549	chr9:126614468-126696549	1	+	126614518	126696451	789624	8	120,187,233,182,78,100,144,256,	0,914,76367,78673,79055,79277,81370,81825,
#Deleted in new
chr9	126640755	126641293	chr9:126640755-126641293	3	+	126640755	126640755	8553170	2	77,317,	0,221,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	126805005	126838210	chr9:126805005-126838210	3	+	126832509	126833913	0	2	127,5724,	0,27481,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	126805014	126838210	chr9:126805014-126838210	1	+	126832509	126833913	0	3	118,123,5724,	0,3778,27472,
#Partially deleted in new
chr9	126805032	126833096	chr9:126805032-126833096	0	+	126832509	126833096	789624	2	100,610,	0,27454,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	126831408	126837103	chr9:126831408-126837103	1	+	126832509	126833913	0	1	5695,	0,
#Deleted in new
chr9	126836219	126836412	chr9:126836219-126836412	0	+	126836219	126836219	8553170	1	193,	0,
#Partially deleted in new
chr9	126860664	126885878	chr9:126860664-126885878	3	+	126879399	126880914	789624	2	75,6489,	0,18725,
#Deleted in new
chr9	126879347	126885875	chr9:126879347-126885875	1	+	126879411	126880914	789624	1	6528,	0,
#Partially deleted in new
chr9	126914773	127223164	chr9:126914773-127223164	3	+	126962289	127218769	0	19	202,122,108,51,84,90,93,127,138,94,68,127,158,52,106,93,106,92,4425,	0,47451,51070,62921,119657,135269,138073,154456,251295,253905,259941,280317,281700,284241,297357,297853,298170,299977,303966,
#Partially deleted in new
chr9	126914773	127217445	chr9:126914773-127217445	1	+	126962289	127217001	0	18	239,122,108,51,84,90,93,127,138,94,68,127,84,106,93,106,92,540,	0,47451,51070,62921,119657,135269,138073,154456,251295,253905,259941,280317,295921,297357,297853,298170,299977,302132,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	126914785	127184336	chr9:126914785-127184336	1	+	126962289	127184111	0	12	227,122,108,51,84,90,93,127,138,94,68,470,	0,47439,51058,62909,119645,135257,138061,154444,251283,253893,259929,269081,
#Partially deleted in new
chr9	126914789	127070000	chr9:126914789-127070000	0	+	126914789	126914789	8553170	8	208,122,108,51,84,90,93,771,	0,47435,51054,62905,119641,135253,138057,154440,
#Partially deleted in new
chr9	126914805	126990223	chr9:126914805-126990223	1	+	126962289	126990003	0	5	207,122,108,51,331,	0,47419,51038,62889,75087,
#Partially deleted in new
chr9	126914826	127069355	chr9:126914826-127069355	0	+	126962289	127069355	789624	7	186,122,108,51,84,93,126,	0,47398,51017,62868,119604,138020,154403,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	126914831	127016961	chr9:126914831-127016961	0	+	126914831	126914831	8553170	5	181,122,108,51,302,	0,47393,51012,62863,101828,
#Partially deleted in new
chr9	126914850	127178426	chr9:126914850-127178426	1	+	126962289	127177904	0	12	162,122,108,51,84,90,93,127,138,94,68,530,	0,47374,50993,62844,119580,135192,137996,154379,251218,253828,259864,263046,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	126915449	126978306	chr9:126915449-126978306	0	+	126915449	126915449	8553170	4	27,122,108,612,	0,46775,50394,62245,
#Partially deleted in new
chr9	126962224	127217812	chr9:126962224-127217812	1	+	126962289	127217001	0	17	122,108,51,84,90,93,127,138,94,68,127,84,106,93,82,92,907,	0,3619,15470,72206,87818,90622,107005,203844,206454,212490,232866,248470,249906,250402,250743,252526,254681,
#Partially deleted in new
chr9	127050055	127079853	chr9:127050055-127079853	0	+	127050055	127050055	8553170	4	77,93,127,253,	0,2791,19174,29545,
#Partially deleted in new
chr9	127087331	127122883	chr9:127087331-127122883	3	-	127088938	127108731	789624	5	1807,271,194,866,569,	0,4338,6401,20583,34983,
#Partially deleted in new
chr9	127087348	127122634	chr9:127087348-127122634	1	-	127088938	127093837	789624	4	1790,271,194,320,	0,4321,6384,34966,
#Deleted in new
chr9	127106924	127108047	chr9:127106924-127108047	0	-	127106924	127106924	8553170	2	174,133,	0,990,
#Deleted in new
chr9	127106924	127108044	chr9:127106924-127108044	0	-	127106924	127106924	8553170	2	182,130,	0,990,
#Deleted in new
chr9	127210502	127212967	chr9:127210502-127212967	0	+	127210502	127210502	8553170	5	23,84,106,93,24,	0,192,1628,2124,2441,
#Partially deleted in new
chr9	127210744	127223166	chr9:127210744-127223166	0	+	127210744	127218769	789624	6	34,106,93,106,92,4427,	0,1386,1882,2199,4006,7995,
#Partially deleted in new
chr9	127212675	127217344	chr9:127212675-127217344	0	+	127212675	127212675	8553170	4	44,106,92,439,	0,268,2075,4230,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	127213782	127216170	chr9:127213782-127216170	0	-	127213782	127213782	8553170	2	182,136,	0,2252,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	127213788	127221907	chr9:127213788-127221907	3	-	127213788	127213788	8553170	3	394,145,104,	0,2246,8015,
#Partially deleted in new
chr9	127224264	127333086	chr9:127224264-127333086	0	+	127243106	127333086	789624	11	74,171,70,75,100,119,65,64,27,76,64,	0,18814,40687,66903,87371,89176,93798,96450,100804,108009,108758,
#Partially deleted in new
chr9	127224470	127313470	chr9:127224470-127313470	0	+	127243106	127313470	789624	6	221,171,70,75,100,30,	0,18608,40481,66697,87165,88970,
#Partially deleted in new
chr9	127224538	127320778	chr9:127224538-127320778	0	+	127243106	127311684	789624	7	100,171,75,100,119,65,64,	0,18540,66629,87097,88902,93524,96176,
#Partially deleted in new
chr9	127224625	127313560	chr9:127224625-127313560	0	+	127243106	127243253	789624	5	66,175,75,100,120,	0,18453,66542,87010,88815,
#Partially deleted in new
chr9	127225238	127311677	chr9:127225238-127311677	0	+	127243106	127311677	789624	5	165,171,70,75,42,	0,17840,39713,65929,86397,
#Partially deleted in new
chr9	127225354	127318127	chr9:127225354-127318127	0	+	127243106	127243253	789624	7	49,175,70,75,100,119,65,	0,17724,39597,65813,86281,88086,92708,
#Partially deleted in new
chr9	127245336	127320778	chr9:127245336-127320778	0	+	127245336	127245336	8553170	7	84,70,75,100,119,65,64,	0,19615,45831,66299,68104,72726,75378,
#Partially deleted in new
chr9	127263661	127320778	chr9:127263661-127320778	0	+	127263991	127320778	789624	7	338,70,75,100,119,65,64,	0,1290,27506,47974,49779,54401,57053,
#Partially deleted in new
chr9	127263661	127393547	chr9:127263661-127393547	3	+	127263991	127393254	789624	29	338,70,75,100,119,65,64,27,76,99,104,109,46,107,116,105,75,112,99,117,176,159,67,108,119,139,216,127,465,	0,1290,27506,47974,49779,54401,57053,61407,68612,69361,71568,72466,74454,75983,78557,80573,81741,85262,90184,90632,91635,93557,101638,119776,121365,123531,125242,126979,129421,
#Partially deleted in new
chr9	127264235	127320768	chr9:127264235-127320768	0	+	127264235	127264235	8553170	7	95,70,75,100,119,65,54,	0,716,26932,47400,49205,53827,56479,
#Partially deleted in new
chr9	127264512	127311676	chr9:127264512-127311676	0	+	127264512	127264512	8553170	4	368,70,75,41,	0,439,26655,47123,
#Partially deleted in new
chr9	127264525	127393660	chr9:127264525-127393660	1	+	127264877	127393254	789624	28	496,75,100,119,65,64,27,76,99,104,109,46,107,116,105,75,112,99,117,176,159,67,108,119,139,216,127,578,	0,26642,47110,48915,53537,56189,60543,67748,68497,70704,71602,73590,75119,77693,79709,80877,84398,89320,89768,90771,92693,100774,118912,120501,122667,124378,126115,128557,
#Partially deleted in new
chr9	127264922	127393539	chr9:127264922-127393539	0	+	127264931	127388978	789624	27	99,75,100,119,65,64,27,76,99,104,109,46,107,116,105,75,112,99,117,176,159,67,108,119,216,127,457,	0,26245,46713,48518,53140,55792,60146,67351,68100,70307,71205,73193,74722,77296,79312,80480,84001,88923,89371,90374,92296,100377,118515,120104,123981,125718,128160,
#Partially deleted in new
chr9	127265001	127339750	chr9:127265001-127339750	0	+	127265001	127265001	8553170	7	20,75,100,119,65,64,106,	0,26166,46634,48439,53061,55713,74643,
#Partially deleted in new
chr9	127300092	127300982	chr9:127300092-127300982	7	-	127300092	127300092	16724991	2	376,213,	0,677,
#Partially deleted in new
chr9	127313352	127336222	chr9:127313352-127336222	0	+	127313352	127313352	8553170	8	207,65,64,27,76,99,104,95,	0,4710,7362,11716,18921,19670,21877,22775,
#Partially deleted in new
chr9	127342314	127355449	chr9:127342314-127355449	0	+	127342314	127353890	789624	6	20,105,75,99,117,153,	0,1920,3088,11531,11979,12982,
#Partially deleted in new
chr9	127353517	127355391	chr9:127353517-127355391	0	+	127353517	127353517	8553170	3	427,117,95,	0,776,1779,
#Partially deleted in new
chr9	127355307	127369118	chr9:127355307-127369118	0	+	127355307	127355307	8553170	4	165,159,67,97,	0,1911,9992,13714,
#Partially deleted in new
chr9	127355355	127393539	chr9:127355355-127393539	0	+	127355355	127355355	8553170	12	117,77,159,85,188,67,108,119,139,216,127,457,	0,1073,1863,8593,9233,9944,28082,29671,31837,33548,35285,37727,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	127361715	127393538	chr9:127361715-127393538	0	+	127361715	127361715	8553170	7	3651,108,119,139,216,127,456,	0,21722,23311,25477,27188,28925,31367,
#Deleted in new
chr9	127366769	127367397	chr9:127366769-127367397	3	+	127366769	127366769	8553170	1	628,	0,
#Partially deleted in new
chr9	127387129	127389005	chr9:127387129-127389005	0	+	127387129	127387129	8553170	2	202,102,	0,1774,
#Partially deleted in new
chr9	127388411	127393134	chr9:127388411-127393134	0	+	127388411	127388411	8553170	3	708,127,52,	0,2229,4671,
#Partially deleted in new
chr9	127397137	127407855	chr9:127397137-127407855	1	+	127399969	127407249	789624	8	149,100,197,144,109,174,146,744,	0,2769,5419,6522,6821,7680,8282,9974,
#Partially deleted in new
chr9	127397141	127407898	chr9:127397141-127407898	3	+	127397230	127407249	789624	10	145,163,207,100,197,144,109,174,146,787,	0,234,763,2765,5415,6518,6817,7676,8278,9970,
#Partially deleted in new
chr9	127397154	127405555	chr9:127397154-127405555	0	+	127399969	127405555	789624	7	132,100,197,144,109,174,136,	0,2752,5402,6505,6804,7663,8265,
#Partially deleted in new
chr9	127397206	127404067	chr9:127397206-127404067	0	+	127397230	127404067	789624	6	80,163,100,197,144,109,	0,169,2700,5350,6453,6752,
#Partially deleted in new
chr9	127397225	127407291	chr9:127397225-127407291	1	+	127403725	127407249	789624	7	61,100,144,109,174,146,180,	0,2681,6434,6733,7592,8194,9886,
#Partially deleted in new
chr9	127397230	127407898	chr9:127397230-127407898	1	+	127397230	127407197	789624	9	56,163,207,100,197,144,109,174,787,	0,145,674,2676,5326,6429,6728,7587,9881,
#Partially deleted in new
chr9	127397383	127403791	chr9:127397383-127403791	0	+	127397383	127403791	789624	4	155,100,197,54,	0,2523,5173,6354,
#Partially deleted in new
chr9	127398182	127405476	chr9:127398182-127405476	0	+	127398313	127405476	789624	7	152,100,197,144,109,174,57,	0,1724,4374,5477,5776,6635,7237,
#Partially deleted in new
chr9	127398182	127405475	chr9:127398182-127405475	0	+	127398313	127405475	789624	7	152,100,197,66,109,174,56,	0,1724,4374,5555,5776,6635,7237,
#Partially deleted in new
chr9	127399963	127407652	chr9:127399963-127407652	0	+	127399963	127407453	789624	7	43,197,144,109,174,146,217,	0,2593,3696,3995,4854,5456,7472,
#Deleted in new
chr9	127402363	127403747	chr9:127402363-127403747	0	+	127402363	127402363	8553170	2	390,88,	0,1296,
#Partially deleted in new
chr9	127403277	127405469	chr9:127403277-127405469	0	+	127403277	127403277	8553170	4	526,109,174,50,	0,681,1540,2142,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	127404022	127408419	chr9:127404022-127408419	0	+	127404022	127404022	8553170	5	45,174,146,95,270,	0,795,1397,3413,4127,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	127404048	127405447	chr9:127404048-127405447	0	+	127404048	127404048	8553170	2	943,28,	0,1371,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	127407403	127408424	chr9:127407403-127408424	0	+	127407403	127407403	8553170	2	127,275,	0,746,
#Partially deleted in new
chr9	127424373	127445371	chr9:127424373-127445371	1	+	127428887	127445197	789624	6	430,109,89,127,96,1343,	0,4178,4458,10716,11534,19655,
#Partially deleted in new
chr9	127424373	127445371	chr9:127424373-127445371	1	+	127428887	127445197	789624	5	537,89,127,96,1343,	0,4458,10716,11534,19655,
#Partially deleted in new
chr9	127424373	127445371	chr9:127424373-127445371	1	+	127444102	127445197	789624	3	537,89,1343,	0,4458,19655,
#Partially deleted in new
chr9	127424381	127445372	chr9:127424381-127445372	3	+	127424787	127445197	789624	5	422,89,127,96,1344,	0,4450,10708,11526,19647,
#Partially deleted in new
chr9	127447673	127451405	chr9:127447673-127451405	3	-	127447720	127451317	0	7	53,113,87,82,99,74,125,	0,203,663,1607,1936,3057,3607,
#Partially deleted in new
chr9	127447673	127451405	chr9:127447673-127451405	0	-	127447673	127447673	8553170	7	53,113,87,82,99,74,356,	0,203,663,1607,1936,3057,3376,
#Partially deleted in new
chr9	127447676	127451373	chr9:127447676-127451373	1	-	127447720	127451317	0	6	50,113,87,82,74,93,	0,200,660,1604,3054,3604,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	127447679	127451405	chr9:127447679-127451405	0	-	127447679	127447679	8553170	4	310,87,82,1796,	0,657,1601,1930,
#Deleted in new
chr9	127448500	127448630	chr9:127448500-127448630	3	-	127448500	127448500	789624	1	130,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	127449109	127449700	chr9:127449109-127449700	0	-	127449109	127449109	8553170	2	253,91,	0,500,
#Partially deleted in new
chr9	127451485	127503501	chr9:127451485-127503501	3	+	127454527	127502899	789624	26	184,156,104,57,45,78,69,85,122,91,131,30,123,140,45,71,100,88,75,81,96,99,132,82,134,728,	0,443,3010,3512,4090,5830,7517,9687,10766,16254,22315,27448,27897,28353,29697,31464,34250,36190,37958,39729,41316,43834,44478,45767,49524,51288,
#Partially deleted in new
chr9	127451504	127503499	chr9:127451504-127503499	1	+	127454527	127502899	789624	25	165,156,104,57,45,78,69,85,122,91,131,30,123,140,45,71,100,88,75,96,99,132,82,134,726,	0,424,2991,3493,4071,5811,7498,9668,10747,16235,22296,27429,27878,28334,29678,31445,34231,36171,37939,41297,43815,44459,45748,49505,51269,
#Partially deleted in new
chr9	127451512	127503499	chr9:127451512-127503499	1	+	127454527	127502899	789624	25	572,104,57,45,78,69,85,122,91,131,30,123,140,45,71,100,88,75,81,96,99,132,82,134,726,	0,2983,3485,4063,5803,7490,9660,10739,16227,22288,27421,27870,28326,29670,31437,34223,36163,37931,39702,41289,43807,44451,45740,49497,51261,
#Partially deleted in new
chr9	127451532	127454012	chr9:127451532-127454012	0	+	127451532	127451532	8553170	3	137,156,534,	0,396,1946,
#Partially deleted in new
chr9	127451930	127457413	chr9:127451930-127457413	0	+	127451930	127451930	8553170	4	154,104,57,98,	0,2565,3067,5385,
#Partially deleted in new
chr9	127452254	127503499	chr9:127452254-127503499	1	+	127454527	127502899	789624	25	45,104,57,45,78,69,85,122,91,131,30,123,140,45,71,100,88,75,81,96,99,132,82,134,726,	0,2241,2743,3321,5061,6748,8918,9997,15485,21546,26679,27128,27584,28928,30695,33481,35421,37189,38960,40547,43065,43709,44998,48755,50519,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	127470874	127470987	chr9:127470874-127470987	3	+	127470874	127470874	8553170	1	113,	0,
#Partially deleted in new
chr9	127473928	127487560	chr9:127473928-127487560	0	+	127473928	127473928	8553170	9	3,30,123,140,45,71,100,290,66,	0,5005,5454,5910,7254,9021,11807,12476,13566,
#Partially deleted in new
chr9	127479385	127503499	chr9:127479385-127503499	0	+	127479385	127479385	8553170	14	120,140,45,71,105,88,75,81,96,99,132,82,134,726,	0,453,1797,3564,6350,8290,10058,11829,13416,15934,16578,17867,21624,23388,
#Partially deleted in new
chr9	127479948	127501054	chr9:127479948-127501054	0	+	127479948	127479948	8553170	11	30,45,71,105,88,75,81,96,132,82,45,	0,1234,3001,5787,7727,9495,11266,12853,16015,17304,21061,
#Partially deleted in new
chr9	127505338	127578989	chr9:127505338-127578989	1	-	127506844	127578937	789624	14	2093,112,108,117,156,188,163,105,116,168,106,129,131,68,	0,2528,2754,3083,3637,4807,11518,11773,12487,18340,19719,21855,26309,73583,
#Partially deleted in new
chr9	127505342	127569088	chr9:127505342-127569088	3	-	127506844	127568874	789624	14	2089,112,108,117,156,188,163,105,116,168,106,129,131,269,	0,2524,2750,3079,3633,4803,11514,11769,12483,18336,19715,21851,26305,63477,
#Partially deleted in new
chr9	127505342	127568885	chr9:127505342-127568885	0	-	127505342	127505342	8553170	4	152,54,90,66,	0,26382,55805,63477,
#Partially deleted in new
chr9	127507171	127568953	chr9:127507171-127568953	0	-	127507171	127507171	8553170	6	260,68,106,129,131,134,	0,695,17886,20022,24476,61648,
#Partially deleted in new
chr9	127507183	127569076	chr9:127507183-127569076	0	-	127507183	127507183	8553170	5	248,112,108,24,162,	0,683,909,1238,61731,
#Partially deleted in new
chr9	127509887	127516893	chr9:127509887-127516893	0	-	127509887	127509887	8553170	2	446,37,	0,6969,
#Partially deleted in new
chr9	127524805	127527221	chr9:127524805-127527221	0	-	127524805	127524805	8553170	2	358,28,	0,2388,
#Partially deleted in new
chr9	127579369	127690886	chr9:127579369-127690886	1	+	127651607	127684477	789624	20	165,50,82,77,79,104,149,85,131,108,61,66,81,139,110,102,86,155,126,112,	0,72233,74345,79005,80660,81732,83835,85877,86796,88710,90528,92681,93811,96434,97274,99061,100787,103036,104998,111405,
#Partially deleted in new
chr9	127611759	127663265	chr9:127611759-127663265	0	+	127651607	127663265	789624	7	97,50,82,77,79,104,61,	0,39843,41955,46615,48270,49342,51445,
#Partially deleted in new
chr9	127611804	127692680	chr9:127611804-127692680	0	+	127651607	127673362	789624	20	243,50,82,77,79,104,149,85,131,108,61,66,81,80,139,110,102,86,155,1906,	0,39798,41910,46570,48225,49297,51400,53442,54361,56275,58093,60246,61376,61543,63999,64839,66626,68352,70601,78970,
#Partially deleted in new
chr9	127611833	127692735	chr9:127611833-127692735	1	+	127651607	127690857	789624	19	214,50,82,77,79,104,149,85,131,108,61,66,81,139,110,102,86,155,1961,	0,39769,41881,46541,48196,49268,51371,53413,54332,56246,58064,60217,61347,63970,64810,66597,68323,70572,78941,
#Partially deleted in new
chr9	127612206	127692716	chr9:127612206-127692716	3	+	127612403	127684477	789624	20	234,50,82,77,79,104,149,85,131,108,61,66,81,139,110,102,86,155,126,1942,	0,39396,41508,46168,47823,48895,50998,53040,53959,55873,57691,59844,60974,63597,64437,66224,67950,70199,72161,78568,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr9	127612221	127696027	chr9:127612221-127696027	0	+	127612403	127695016	789624	20	219,50,82,77,79,104,149,85,131,108,61,66,81,139,110,102,86,155,238,649,	0,39381,41493,46153,47808,48880,50983,53025,53944,55858,57676,59829,60959,63582,64422,66209,67935,70184,82772,83157,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr9	127612221	127696027	chr9:127612221-127696027	1	+	127612403	127695016	789624	19	219,50,82,77,79,104,149,85,131,108,61,66,81,139,110,102,86,155,1034,	0,39381,41493,46153,47808,48880,50983,53025,53944,55858,57676,59829,60959,63582,64422,66209,67935,70184,82772,
#Partially deleted in new
chr9	127612221	127692735	chr9:127612221-127692735	1	+	127612403	127686489	789624	20	219,50,82,77,79,104,149,85,131,108,61,66,81,139,110,102,86,155,80,1961,	0,39381,41493,46153,47808,48880,50983,53025,53944,55858,57676,59829,60959,63582,64422,66209,67935,70184,74236,78553,
#Partially deleted in new
chr9	127612247	127692735	chr9:127612247-127692735	0	+	127651607	127653931	789624	20	193,50,82,1074,77,79,104,149,85,131,108,61,66,81,139,110,102,86,155,1961,	0,39355,41467,41643,46127,47782,48854,50957,52999,53918,55832,57650,59803,60933,63556,64396,66183,67909,70158,78527,
#Partially deleted in new
chr9	127612264	127692735	chr9:127612264-127692735	0	+	127651607	127661134	789624	20	176,50,82,23,77,79,104,149,85,131,108,61,66,81,139,110,102,86,155,1961,	0,39338,41450,42677,46110,47765,48837,50940,52982,53901,55815,57633,59786,60916,63539,64379,66166,67892,70141,78510,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr9	127612264	127692936	chr9:127612264-127692936	1	+	127651607	127690857	789624	20	176,190,50,82,77,79,104,149,85,131,108,61,66,81,139,110,102,86,155,2162,	0,27163,39338,41450,46110,47765,48837,50940,52982,53901,55815,57633,59786,60916,63539,64379,66166,67892,70141,78510,
#Partially deleted in new
chr9	127612276	127661189	chr9:127612276-127661189	0	+	127653738	127661189	789624	6	164,48,82,77,79,88,	0,39328,41438,46098,47753,48825,
#Partially deleted in new
chr9	127612276	127661126	chr9:127612276-127661126	0	+	127651607	127661126	789624	7	164,95,50,82,77,79,25,	0,30192,39326,41438,46098,47753,48825,
#Partially deleted in new
chr9	127612282	127692716	chr9:127612282-127692716	1	+	127612403	127690857	789624	19	158,50,82,77,79,104,149,85,131,108,61,66,81,139,110,102,86,155,1942,	0,39320,41432,46092,47747,48819,50922,52964,53883,55797,57615,59768,60898,63521,64361,66148,67874,70123,78492,
#Deleted in new
chr9	127612360	127613751	chr9:127612360-127613751	1	+	127612403	127613297	789624	2	80,486,	0,905,
#Partially deleted in new
chr9	127642342	127663258	chr9:127642342-127663258	0	+	127651607	127663258	789624	7	221,50,82,77,79,104,54,	0,9260,11372,16032,17687,18759,20862,
#Partially deleted in new
chr9	127651623	127684513	chr9:127651623-127684513	0	+	127651623	127684412	789624	19	29,82,77,79,104,149,85,131,108,61,66,81,139,110,102,86,155,53,146,	0,2091,6751,8406,9478,11581,13623,14542,16456,18274,20427,21557,24180,25020,26807,28533,30782,32294,32744,
#Partially deleted in new
chr9	127661132	127663722	chr9:127661132-127663722	0	+	127661132	127663357	789624	2	73,518,	0,2072,
#Partially deleted in new
chr9	127661458	127692936	chr9:127661458-127692936	0	+	127661458	127661458	8553170	14	265,149,85,131,108,61,66,81,139,110,102,86,155,2162,	0,1746,3788,4707,6621,8439,10592,11722,14345,15185,16972,18698,20947,29316,
#Partially deleted in new
chr9	127678523	127684680	chr9:127678523-127684680	0	+	127678523	127684477	789624	4	9,86,155,313,	0,1633,3882,5844,
#Partially deleted in new
chr9	127679784	127691061	chr9:127679784-127691061	0	+	127679784	127679784	8553170	4	53,86,155,287,	0,372,2621,10990,
#Deleted in new
chr9	127690097	127690840	chr9:127690097-127690840	3	-	127690097	127690097	8553170	1	743,	0,
#Deleted in new
chr9	127690133	127692715	chr9:127690133-127692715	0	+	127690133	127690133	8553170	1	2582,	0,
#Partially deleted in new
chr9	127690347	127694959	chr9:127690347-127694959	0	-	127690749	127694959	789624	2	477,33,	0,4579,
#Deleted in new
chr9	127690686	127690795	chr9:127690686-127690795	3	-	127690686	127690686	5263520	1	109,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	127692977	127715647	chr9:127692977-127715647	1	-	127693248	127715639	789624	3	331,215,213,	0,1949,22457,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	127706988	127714021	chr9:127706988-127714021	0	+	127706988	127706988	8553170	8	204,272,74,268,111,677,187,581,	0,2433,3692,4240,4831,5210,6031,6452,
#Partially deleted in new
chr9	127706991	127714023	chr9:127706991-127714023	3	+	127707031	127713905	789624	9	201,272,154,268,131,151,167,187,190,	0,2430,3609,4237,4828,5207,5717,6028,6842,
#Partially deleted in new
chr9	127707018	127714021	chr9:127707018-127714021	1	+	127707031	127712745	789624	9	174,272,154,268,131,151,271,187,188,	0,2403,3582,4210,4801,5180,5586,6001,6815,
#Partially deleted in new
chr9	127711889	127715896	chr9:127711889-127715896	0	+	127711889	127711889	8553170	2	986,643,	0,3364,
#Partially deleted in new
chr9	127712336	127716002	chr9:127712336-127716002	0	+	127712336	127712336	8553170	2	539,2169,	0,1497,
#Partially deleted in new
chr9	127712737	127715337	chr9:127712737-127715337	0	+	127712737	127715337	789624	3	138,187,84,	0,282,2516,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	127713492	127716003	chr9:127713492-127716003	1	-	127714149	127715639	789624	4	790,100,220,460,	0,1110,1482,2051,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	127713509	127724873	chr9:127713509-127724873	3	-	127714099	127715639	789624	6	773,46,100,220,1416,137,	0,869,1093,1465,2034,11227,
#Deleted in new
chr9	127713948	127715657	chr9:127713948-127715657	1	-	127714099	127715639	789624	5	334,46,100,220,114,	0,430,654,1026,1595,
#Deleted in new
chr9	127713971	127715604	chr9:127713971-127715604	0	-	127714099	127715604	789624	5	218,46,100,220,61,	0,407,631,1003,1572,
#Deleted in new
chr9	127714067	127715631	chr9:127714067-127715631	0	-	127714149	127715631	789624	4	215,46,220,88,	0,311,907,1476,
#Deleted in new
chr9	127714627	127715651	chr9:127714627-127715651	0	-	127714627	127715639	789624	3	75,241,108,	0,347,916,
#Partially deleted in new
chr9	127715979	127724832	chr9:127715979-127724832	0	-	127715979	127715979	8553170	2	595,306,	0,8547,
#Partially deleted in new
chr9	127716065	127731600	chr9:127716065-127731600	3	+	127716145	127731405	789624	14	98,173,91,144,101,130,215,245,142,166,143,196,88,965,	0,778,1268,1563,4012,4200,7053,8054,8690,10173,10904,11204,13515,14570,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	127720278	127731522	chr9:127720278-127731522	0	+	127720278	127720278	8553170	6	117,215,245,166,143,4253,	0,2840,3841,5960,6691,6991,
#Partially deleted in new
chr9	127720288	127731589	chr9:127720288-127731589	0	+	127720288	127720288	8553170	8	107,215,778,166,143,196,88,954,	0,2830,3831,5950,6681,6981,9292,10347,
#Partially deleted in new
chr9	127731523	127735292	chr9:127731523-127735292	1	-	127732142	127735270	789624	4	755,176,266,173,	0,1861,2775,3596,
#Partially deleted in new
chr9	127731523	127735317	chr9:127731523-127735317	3	-	127732033	127735270	789624	5	755,128,176,266,198,	0,1040,1861,2775,3596,
#Partially deleted in new
chr9	127731524	127735294	chr9:127731524-127735294	1	-	127733215	127735270	789624	3	2036,266,175,	0,2774,3595,
#Partially deleted in new
chr9	127731524	127735294	chr9:127731524-127735294	1	-	127733492	127735270	789624	2	2036,175,	0,3595,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	127731526	127735307	chr9:127731526-127735307	0	-	127731526	127731526	8553170	2	752,2744,	0,1037,
#Partially deleted in new
chr9	127731779	127735275	chr9:127731779-127735275	0	-	127733492	127735270	789624	3	499,176,156,	0,1605,3340,
#Partially deleted in new
chr9	127731843	127735313	chr9:127731843-127735313	0	-	127733492	127735270	789624	4	435,128,176,194,	0,720,1541,3276,
#Deleted in new
chr9	127731911	127732874	chr9:127731911-127732874	0	-	127731911	127731911	8553170	2	367,311,	0,652,
#Partially deleted in new
chr9	127732168	127735275	chr9:127732168-127735275	0	-	127733492	127735270	789624	3	523,176,156,	0,1216,2951,
#Partially deleted in new
chr9	127738316	127771438	chr9:127738316-127771438	3	-	127738745	127771229	0	11	605,207,112,172,116,536,125,455,129,40,253,	0,1365,1941,3471,4532,6247,8830,10894,12855,23294,32869,
#Partially deleted in new
chr9	127738317	127771369	chr9:127738317-127771369	1	-	127738745	127767211	0	12	604,207,112,172,116,536,125,455,129,40,371,184,	0,1364,1940,3470,4531,6246,8829,10893,12854,23293,28583,32868,
#Partially deleted in new
chr9	127738317	127755304	chr9:127738317-127755304	1	-	127738745	127755159	0	10	604,207,112,172,116,536,125,455,129,226,	0,1364,1940,3470,4531,6246,8829,10893,12854,16761,
#Partially deleted in new
chr9	127738317	127762418	chr9:127738317-127762418	1	-	127738745	127749287	0	11	604,207,112,172,116,536,125,455,129,40,298,	0,1364,1940,3470,4531,6246,8829,10893,12854,23293,23803,
#Partially deleted in new
chr9	127738318	127778741	chr9:127738318-127778741	1	-	127738745	127778627	0	12	603,207,112,172,116,536,125,455,129,40,478,151,	0,1363,1939,3469,4530,6245,8828,10892,12853,23292,35671,40272,
#Partially deleted in new
chr9	127738485	127755274	chr9:127738485-127755274	1	-	127738745	127755159	0	10	436,207,112,172,116,536,125,455,129,190,	0,1196,1772,3302,4363,6078,8661,10725,12686,16599,
#Partially deleted in new
chr9	127741844	127778710	chr9:127741844-127778710	0	-	127741844	127741844	8553170	5	115,116,252,121,115,	0,1004,2719,32502,36751,
#Partially deleted in new
chr9	127742658	127744720	chr9:127742658-127744720	0	-	127742658	127742658	8553170	2	306,157,	0,1905,
#Partially deleted in new
chr9	127742848	127774144	chr9:127742848-127774144	0	-	127742848	127742848	8553170	4	116,536,129,155,	0,1715,8323,31141,
#Partially deleted in new
chr9	127744897	127762416	chr9:127744897-127762416	0	-	127744897	127749287	789624	6	202,125,455,129,40,25,	0,2249,4313,6274,16713,17494,
#Partially deleted in new
chr9	127745017	127762188	chr9:127745017-127762188	0	-	127745017	127745017	8553170	6	82,125,455,129,40,57,	0,2129,4193,6154,16593,17114,
#Partially deleted in new
chr9	127747146	127762287	chr9:127747146-127762287	0	-	127747146	127747146	8553170	5	125,455,129,40,167,	0,2064,4025,14464,14974,
#Partially deleted in new
chr9	127749211	127755030	chr9:127749211-127755030	0	-	127749211	127754841	789624	3	454,129,195,	0,1960,5624,
#Deleted in new
chr9	127785678	127787575	chr9:127785678-127787575	0	+	127785797	127787575	789624	3	562,82,58,	0,1022,1839,
#Deleted in new
chr9	127785832	127785923	chr9:127785832-127785923	3	+	127785832	127785832	5263520	1	91,	0,
#Deleted in new
chr9	127785917	127786007	chr9:127785917-127786007	3	+	127785917	127785917	789624	1	90,	0,
#Deleted in new
chr9	127786048	127790787	chr9:127786048-127790787	3	+	127786148	127789543	0	7	192,82,91,167,172,149,1610,	0,652,1469,1898,2165,2495,3129,
#Deleted in new
chr9	127786073	127788412	chr9:127786073-127788412	0	+	127786073	127786073	8553170	5	167,82,91,167,199,	0,627,1444,1873,2140,
#Deleted in new
chr9	127787499	127788605	chr9:127787499-127788605	0	+	127787499	127787499	8553170	4	109,167,172,62,	0,447,714,1044,
#Deleted in new
chr9	127788421	127789364	chr9:127788421-127789364	0	+	127788421	127788421	8553170	2	271,187,	0,756,
#Partially deleted in new
chr9	127794596	127807682	chr9:127794596-127807682	0	+	127794596	127794596	8553170	8	216,129,54,65,115,78,62,97,	0,9688,9902,10039,12376,12612,12824,12989,
#Partially deleted in new
chr9	127794681	127808301	chr9:127794681-127808301	0	+	127794681	127794681	8553170	8	131,129,54,65,78,62,103,68,	0,9603,9817,9954,12527,12739,12904,13552,
#Partially deleted in new
chr9	127802857	127814081	chr9:127802857-127814081	1	+	127802924	127813604	789624	14	205,129,54,65,115,62,103,78,148,90,151,76,67,887,	0,1427,1641,1778,4115,4563,4728,5376,5700,5942,6826,7173,8087,10337,
#Partially deleted in new
chr9	127802857	127814081	chr9:127802857-127814081	1	+	127802924	127810095	789624	14	205,129,54,65,115,78,62,103,78,90,151,76,67,887,	0,1427,1641,1778,4115,4351,4563,4728,5376,5942,6826,7173,8087,10337,
#Partially deleted in new
chr9	127802874	127814069	chr9:127802874-127814069	3	+	127802924	127813604	789624	15	188,129,54,65,115,78,62,103,78,148,90,151,76,67,875,	0,1410,1624,1761,4098,4334,4546,4711,5359,5683,5925,6809,7156,8070,10320,
#Partially deleted in new
chr9	127802892	127808882	chr9:127802892-127808882	0	+	127802892	127802892	8553170	11	170,129,54,65,115,78,62,190,78,148,83,	0,1392,1606,1743,4080,4316,4528,4693,5341,5665,5907,
#Partially deleted in new
chr9	127802910	127813424	chr9:127802910-127813424	1	+	127802924	127810095	789624	13	152,129,54,65,115,78,62,103,78,90,151,76,230,	0,1374,1588,1725,4062,4298,4510,4675,5323,5889,6773,7120,10284,
#Partially deleted in new
chr9	127802916	127807688	chr9:127802916-127807688	0	+	127802916	127802916	8553170	5	146,115,78,62,103,	0,4056,4292,4504,4669,
#Partially deleted in new
chr9	127802917	127814058	chr9:127802917-127814058	0	+	127802917	127802917	8553170	15	145,129,54,65,96,78,62,103,78,148,90,151,76,67,864,	0,1367,1581,1718,4074,4291,4503,4668,5316,5640,5882,6766,7113,8027,10277,
#Partially deleted in new
chr9	127802931	127807849	chr9:127802931-127807849	0	+	127802931	127802931	8553170	8	131,129,54,65,115,78,62,264,	0,1353,1567,1704,4041,4277,4489,4654,
#Partially deleted in new
chr9	127803023	127807279	chr9:127803023-127807279	0	+	127803023	127803023	8553170	6	133,129,54,65,115,71,	0,1261,1475,1612,3949,4185,
#Partially deleted in new
chr9	127803207	127814059	chr9:127803207-127814059	1	+	127804296	127813604	789624	15	197,129,54,65,115,78,62,103,78,148,90,151,76,67,865,	0,1077,1291,1428,3765,4001,4213,4378,5026,5350,5592,6476,6823,7737,9987,
#Partially deleted in new
chr9	127803251	127809715	chr9:127803251-127809715	0	+	127804296	127809715	789624	11	153,129,54,65,115,78,62,103,78,90,32,	0,1033,1247,1384,3721,3957,4169,4334,4982,5548,6432,
#Partially deleted in new
chr9	127803323	127808301	chr9:127803323-127808301	0	+	127804296	127808301	789624	8	81,129,54,65,115,62,103,68,	0,961,1175,1312,3649,4097,4262,4910,
#Deleted in new
chr9	127804285	127804857	chr9:127804285-127804857	0	+	127804285	127804285	8553170	3	128,54,222,	0,213,350,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	127806496	127808705	chr9:127806496-127808705	0	+	127806496	127806496	8553170	6	591,78,62,103,78,148,	0,712,924,1089,1737,2061,
#Partially deleted in new
chr9	127807672	127813284	chr9:127807672-127813284	0	+	127807672	127807672	8553170	7	16,78,148,90,151,76,90,	0,561,885,1127,2011,2358,5522,
#Deleted in new
chr9	127808146	127810037	chr9:127808146-127810037	0	+	127808146	127808146	8553170	5	165,148,90,151,7,	0,411,653,1537,1884,
#Partially deleted in new
chr9	127808263	127814327	chr9:127808263-127814327	0	+	127808263	127808263	8553170	8	48,148,90,151,76,67,129,120,	0,294,536,1420,1767,2681,4931,5944,
#Deleted in new
chr9	127808721	127810058	chr9:127808721-127810058	0	+	127808721	127808721	8553170	3	168,151,28,	0,962,1309,
#Partially deleted in new
chr9	127809993	127813574	chr9:127809993-127813574	0	+	127809993	127809993	8553170	3	113,67,380,	0,951,3201,
#Partially deleted in new
chr9	127815011	127854756	chr9:127815011-127854756	1	-	127815681	127854355	0	15	795,111,55,258,117,39,138,143,175,127,166,163,141,152,468,	0,931,2137,3108,3704,4610,4888,9292,9788,10219,10683,11498,14675,28082,39277,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr9	127815012	127847167	chr9:127815012-127847167	1	-	127815681	127825837	789624	15	794,111,55,258,117,39,138,143,175,127,166,163,141,152,225,	0,930,2136,3107,3703,4609,4887,9291,9787,10218,10682,11497,14674,28081,31930,
#Partially deleted in new
chr9	127815016	127854636	chr9:127815016-127854636	3	-	127815916	127854355	0	14	1037,55,258,117,39,138,143,175,127,166,163,141,152,348,	0,2132,3103,3699,4605,4883,9287,9783,10214,10678,11493,14670,28077,39272,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	127816065	127822520	chr9:127816065-127822520	3	+	127816065	127816065	789624	6	1278,99,79,112,304,183,	0,1693,2245,2534,5129,6272,
#Partially deleted in new
chr9	127819237	127824405	chr9:127819237-127824405	0	-	127819237	127819237	8553170	3	423,138,102,	0,662,5066,
#Partially deleted in new
chr9	127825788	127829804	chr9:127825788-127829804	0	-	127825788	127825788	8553170	4	72,163,142,118,	0,721,1256,3898,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	127832634	127832743	chr9:127832634-127832743	3	-	127832634	127832634	8553170	1	109,	0,
#Deleted in new
chr9	127841111	127841222	chr9:127841111-127841222	7	-	127841111	127841111	16724991	1	111,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	127866479	127877743	chr9:127866479-127877743	3	-	127868007	127874617	0	7	1597,192,117,164,36,39,121,	0,1841,5343,6210,6546,8131,11143,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	127866490	127877675	chr9:127866490-127877675	1	-	127868007	127874617	0	7	1586,192,117,164,36,39,53,	0,1830,5332,6199,6535,8120,11132,
#Partially deleted in new
chr9	127867840	127872713	chr9:127867840-127872713	0	-	127868460	127872713	789624	4	236,155,117,24,	0,480,3982,4849,
#Partially deleted in new
chr9	127867851	127905975	chr9:127867851-127905975	0	-	127886598	127896256	789624	13	225,192,117,164,155,39,1603,108,407,180,91,96,41,	0,469,3971,4838,5174,6759,17334,19632,22785,26660,28390,37355,38083,
#Partially deleted in new
chr9	127867863	127899591	chr9:127867863-127899591	2	-	127885186	127896256	789624	13	213,192,117,164,36,39,158,153,108,407,180,91,89,	0,457,3959,4826,5162,6747,17322,18772,19620,22773,26648,28378,31639,
#Partially deleted in new
chr9	127867889	127873054	chr9:127867889-127873054	0	-	127867889	127867889	8553170	4	187,192,117,29,	0,431,3933,5136,
#Partially deleted in new
chr9	127867998	127875007	chr9:127867998-127875007	1	-	127868007	127874617	0	7	78,192,117,164,36,39,131,	0,322,3824,4691,5027,6612,6878,
#Partially deleted in new
chr9	127868000	127873544	chr9:127868000-127873544	1	-	127868007	127873448	789624	6	76,192,117,164,36,151,	0,320,3822,4689,5025,5393,
#Partially deleted in new
chr9	127868462	127877671	chr9:127868462-127877671	0	-	127873088	127874617	789624	6	50,117,164,155,39,49,	0,3360,4227,4563,6148,9160,
#Deleted in new
chr9	127869414	127869495	chr9:127869414-127869495	3	-	127869414	127869414	5263520	1	81,	0,
#Partially deleted in new
chr9	127872711	127885432	chr9:127872711-127885432	0	-	127872711	127872711	8553170	4	142,36,39,247,	0,314,1899,12474,
#Partially deleted in new
chr9	127885320	127897981	chr9:127885320-127897981	1	-	127886598	127897981	789624	6	1468,108,407,180,91,26,	0,2163,5316,9191,10921,12635,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	127885320	127899653	chr9:127885320-127899653	3	-	127886598	127897981	789624	7	1468,108,407,180,91,55,151,	0,2163,5316,9191,10921,12635,14182,
#Partially deleted in new
chr9	127885320	127897408	chr9:127885320-127897408	1	-	127887525	127896256	789624	5	1468,108,180,91,171,	0,2163,9191,10921,11917,
#Partially deleted in new
chr9	127885320	127905348	chr9:127885320-127905348	1	-	127886598	127896256	789624	6	1468,108,407,180,91,142,	0,2163,5316,9191,10921,19886,
#Partially deleted in new
chr9	127885321	127897408	chr9:127885321-127897408	1	-	127886598	127896256	789624	6	1467,108,407,180,91,171,	0,2162,5315,9190,10920,11916,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	127885321	127899646	chr9:127885321-127899646	1	-	127886471	127897981	789624	7	1463,108,407,180,91,55,144,	0,2162,5315,9190,10920,12634,14181,
#Partially deleted in new
chr9	127885321	127899655	chr9:127885321-127899655	1	-	127886598	127896256	789624	6	1467,108,407,180,91,153,	0,2162,5315,9190,10920,14181,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	127885325	127899574	chr9:127885325-127899574	0	-	127885325	127885325	8553170	7	1463,108,388,180,91,55,72,	0,2158,5330,9186,10916,12630,14177,
#Partially deleted in new
chr9	127886753	127899593	chr9:127886753-127899593	0	-	127886753	127886753	8553170	5	35,108,180,91,91,	0,730,7758,9488,12749,
#Partially deleted in new
chr9	127887534	127899606	chr9:127887534-127899606	0	-	127887534	127887534	8553170	5	57,407,118,91,104,	0,3102,6977,8707,11968,
#Partially deleted in new
chr9	127890636	127905330	chr9:127890636-127905330	0	-	127890636	127896256	789624	4	407,180,91,124,	0,3875,5605,14570,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	127890697	127899604	chr9:127890697-127899604	0	-	127890697	127890697	8553170	5	346,118,91,55,102,	0,3814,5544,7258,8805,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	127894521	127899416	chr9:127894521-127899416	0	-	127894521	127894521	8553170	4	170,91,55,150,	0,1720,3434,4745,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	127894548	127899535	chr9:127894548-127899535	0	-	127894548	127894548	8553170	4	143,91,185,33,	0,1693,3277,4954,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	127896245	127905408	chr9:127896245-127905408	0	-	127896245	127896245	8553170	3	87,185,202,	0,1580,8961,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	127903014	127905324	chr9:127903014-127905324	0	-	127903014	127903014	8553170	1	2310,	0,
#Partially deleted in new
chr9	127907885	127917026	chr9:127907885-127917026	3	-	127908391	127916419	789624	6	696,108,413,186,87,201,	0,2065,4382,6770,8522,8940,
#Partially deleted in new
chr9	127908317	127914762	chr9:127908317-127914762	0	-	127908317	127908317	8553170	4	264,578,413,107,	0,1633,3950,6338,
#Partially deleted in new
chr9	127908324	127912394	chr9:127908324-127912394	0	-	127908324	127908324	8553170	2	257,127,	0,3943,
#Partially deleted in new
chr9	127908343	127917018	chr9:127908343-127917018	0	-	127908343	127908343	8553170	5	238,108,186,87,193,	0,1607,6312,8064,8482,
#Partially deleted in new
chr9	127908446	127916996	chr9:127908446-127916996	0	-	127908446	127912626	789624	5	135,108,413,186,171,	0,1504,3821,6209,8379,
#Partially deleted in new
chr9	127912386	127914866	chr9:127912386-127914866	0	-	127912386	127912386	8553170	2	294,211,	0,2269,
#Deleted in new
chr9	127915975	127917038	chr9:127915975-127917038	0	-	127915975	127915975	8553170	2	519,213,	0,850,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	127920878	127930797	chr9:127920878-127930797	3	-	127921846	127930752	789624	10	1236,154,113,56,35,125,155,51,198,75,	0,4228,4988,6274,6418,6769,7186,7554,8809,9844,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	127920880	127921734	chr9:127920880-127921734	0	-	127920880	127920880	8553170	2	202,513,	0,341,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	127920880	127921911	chr9:127920880-127921911	0	-	127920880	127920880	8553170	2	202,539,	0,492,
#Partially deleted in new
chr9	127921528	127927491	chr9:127921528-127927491	1	-	127921846	127927193	789624	5	586,154,113,56,195,	0,3578,4338,5624,5768,
#Partially deleted in new
chr9	127921775	127927384	chr9:127921775-127927384	0	-	127921775	127921775	8553170	4	339,154,113,88,	0,3331,4091,5521,
#Partially deleted in new
chr9	127921789	127927186	chr9:127921789-127927186	0	-	127921789	127921789	8553170	4	325,154,22,34,	0,3317,4168,5363,
#Partially deleted in new
chr9	127925134	127928756	chr9:127925134-127928756	0	-	127925134	127925134	8553170	6	126,179,125,155,51,101,	0,2018,2513,2930,3298,3521,
#Partially deleted in new
chr9	127925134	127928770	chr9:127925134-127928770	0	-	127925134	127925134	8553170	8	97,113,56,35,125,155,51,115,	0,732,2018,2162,2513,2930,3298,3521,
#Partially deleted in new
chr9	127925135	127928791	chr9:127925135-127928791	0	-	127925135	127925135	8553170	7	125,56,35,125,155,51,214,	0,2017,2161,2512,2929,3297,3442,
#Partially deleted in new
chr9	127925203	127927457	chr9:127925203-127927457	0	-	127925203	127925203	8553170	4	122,22,56,161,	0,754,1949,2093,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	127925495	127928127	chr9:127925495-127928127	0	-	127925495	127925495	8553170	6	328,22,56,35,125,63,	0,462,1657,1801,2152,2569,
#Deleted in new
chr9	127927776	127930785	chr9:127927776-127930785	0	-	127927776	127927776	8553170	4	443,51,198,63,	0,656,1911,2946,
#Partially deleted in new
chr9	127934502	127940855	chr9:127934502-127940855	0	+	127934502	127934502	8553170	3	143,155,182,	0,5904,6171,
#Deleted in new
chr9	127935098	127938484	chr9:127935098-127938484	3	-	127935721	127937820	789624	4	682,103,90,667,	0,1454,2335,2719,
#Deleted in new
chr9	127935098	127937826	chr9:127935098-127937826	0	-	127935098	127935098	8553170	3	682,971,9,	0,1454,2719,
#Deleted in new
chr9	127935340	127937818	chr9:127935340-127937818	0	-	127935340	127935340	8553170	3	440,103,385,	0,1212,2093,
#Deleted in new
chr9	127935382	127937779	chr9:127935382-127937779	0	-	127935382	127935382	8553170	2	398,346,	0,2051,
#Deleted in new
chr9	127936033	127937843	chr9:127936033-127937843	1	-	127936355	127937820	789624	3	622,90,26,	0,1400,1784,
#Partially deleted in new
chr9	127937882	127940851	chr9:127937882-127940851	2	+	127937882	127937882	8553170	3	242,155,178,	0,2524,2791,
#Partially deleted in new
chr9	127937882	127940843	chr9:127937882-127940843	0	+	127937882	127937882	8553170	3	331,167,170,	0,2512,2791,
#Partially deleted in new
chr9	127937912	127940855	chr9:127937912-127940855	0	+	127937912	127937912	8553170	3	362,155,182,	0,2494,2761,
#Partially deleted in new
chr9	127937918	127940855	chr9:127937918-127940855	0	+	127937918	127937918	8553170	4	206,205,155,182,	0,539,2488,2755,
#Partially deleted in new
chr9	127937921	127940855	chr9:127937921-127940855	0	+	127937921	127937921	8553170	4	292,205,155,182,	0,536,2485,2752,
#Partially deleted in new
chr9	127938130	127940822	chr9:127938130-127940822	0	+	127938130	127938130	8553170	3	532,155,149,	0,2276,2543,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	127938749	127940792	chr9:127938749-127940792	0	+	127938749	127938749	8553170	3	492,167,119,	0,1645,1924,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	127939735	127940952	chr9:127939735-127940952	1	+	127939735	127939735	8553170	2	826,279,	0,938,
#Partially deleted in new
chr9	127940578	127980513	chr9:127940578-127980513	3	-	127943191	127980137	789624	11	2659,70,122,196,105,155,47,117,30,121,522,	0,4036,4198,4788,5070,7492,7789,9844,12996,13226,39413,
#Partially deleted in new
chr9	127940880	127950722	chr9:127940880-127950722	1	-	127943191	127948402	789624	8	2357,70,122,196,105,155,47,300,	0,3734,3896,4486,4768,7190,7487,9542,
#Partially deleted in new
chr9	127940880	127948159	chr9:127940880-127948159	0	-	127940880	127940880	8553170	5	3804,122,196,105,89,	0,3896,4486,4768,7190,
#Partially deleted in new
chr9	127940882	127950722	chr9:127940882-127950722	0	-	127940882	127940882	8553170	6	2355,70,122,196,105,300,	0,3732,3894,4484,4766,9540,
#Partially deleted in new
chr9	127948198	127963745	chr9:127948198-127963745	0	-	127948198	127948198	8553170	6	27,47,117,30,121,24,	0,169,2224,5376,5606,15523,
#Partially deleted in new
chr9	127953268	127980078	chr9:127953268-127980078	0	-	127953268	127953268	8553170	2	336,87,	0,26723,
#Partially deleted in new
chr9	127972581	127980461	chr9:127972581-127980461	0	-	127972581	127972581	8553170	2	66,470,	0,7410,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	128039134	128057362	chr9:128039134-128057362	3	-	128039134	128039134	8553170	2	173,207,	0,18021,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	128061232	128067321	chr9:128061232-128067321	3	-	128063427	128067101	789624	2	2668,731,	0,5358,
#Partially deleted in new
chr9	128061232	128063742	chr9:128061232-128063742	0	-	128061232	128061232	8553170	2	594,369,	0,2141,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	128061989	128066284	chr9:128061989-128066284	0	-	128061989	128061989	8553170	2	1911,138,	0,4157,
#Partially deleted in new
chr9	128063641	128068206	chr9:128063641-128068206	0	-	128063641	128063641	8553170	2	259,84,	0,4481,
#Partially deleted in new
chr9	128068200	128109244	chr9:128068200-128109244	1	+	128068319	128107444	789624	10	380,127,88,112,159,153,108,168,151,1985,	0,32895,33108,34169,35480,37528,37949,38152,38828,39059,
#Partially deleted in new
chr9	128068292	128109245	chr9:128068292-128109245	1	+	128068319	128107444	789624	11	288,127,88,36,112,159,153,108,168,151,1986,	0,32803,33016,33787,34077,35388,37436,37857,38060,38736,38967,
#Partially deleted in new
chr9	128090968	128094457	chr9:128090968-128094457	3	-	128090968	128090968	8553170	2	624,141,	0,3348,
#Partially deleted in new
chr9	128091463	128109245	chr9:128091463-128109245	1	+	128091870	128107444	789624	11	626,127,88,36,112,159,153,108,168,151,1986,	0,9632,9845,10616,10906,12217,14265,14686,14889,15565,15796,
#Partially deleted in new
chr9	128091463	128109245	chr9:128091463-128109245	1	+	128091870	128107444	789624	10	626,127,88,112,159,153,108,168,151,1986,	0,9632,9845,10906,12217,14265,14686,14889,15565,15796,
#Partially deleted in new
chr9	128098303	128109245	chr9:128098303-128109245	3	+	128098566	128107444	789624	10	422,127,88,112,159,153,108,168,151,1986,	0,2792,3005,4066,5377,7425,7846,8049,8725,8956,
#Deleted in new
chr9	128098536	128103729	chr9:128098536-128103729	0	+	128098566	128099343	789624	6	189,111,127,88,112,49,	0,738,2559,2772,3833,5144,
#Deleted in new
chr9	128100866	128103837	chr9:128100866-128103837	0	+	128100866	128100866	8553170	4	356,88,112,157,	0,442,1503,2814,
#Partially deleted in new
chr9	128103721	128107647	chr9:128103721-128107647	0	+	128103721	128107238	789624	3	118,168,619,	0,2631,3307,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	128108580	128118693	chr9:128108580-128118693	3	-	128108580	128108580	789624	5	4069,1209,216,126,771,	0,4897,6493,9129,9342,
#Partially deleted in new
chr9	128120692	128128462	chr9:128120692-128128462	3	-	128121144	128127717	789624	7	581,118,201,150,59,198,1024,	0,1669,2241,3009,3799,4551,6746,
#Partially deleted in new
chr9	128120693	128128462	chr9:128120693-128128462	1	-	128121144	128123814	789624	8	580,118,201,150,59,93,198,215,	0,1668,2240,3008,3798,4085,4550,7554,
#Partially deleted in new
chr9	128120693	128128188	chr9:128120693-128128188	1	-	128121144	128123814	789624	8	580,118,201,146,59,40,66,134,	0,1668,2240,3008,3798,4550,4682,7361,
#Partially deleted in new
chr9	128120722	128127717	chr9:128120722-128127717	0	-	128120722	128120722	8553170	7	551,773,150,59,93,198,279,	0,1639,2979,3769,4056,4521,6716,
#Partially deleted in new
chr9	128120750	128123755	chr9:128120750-128123755	0	-	128120750	128120750	8553170	4	523,285,201,54,	0,1611,2183,2951,
#Partially deleted in new
chr9	128120751	128125253	chr9:128120751-128125253	0	-	128120751	128120751	8553170	5	522,773,150,59,10,	0,1610,2950,3740,4492,
#Partially deleted in new
chr9	128122445	128128146	chr9:128122445-128128146	0	-	128122445	128122445	8553170	7	34,201,146,59,40,66,92,	0,488,1256,2046,2798,2930,5609,
#Partially deleted in new
chr9	128122447	128127675	chr9:128122447-128127675	0	-	128122447	128122447	8553170	6	32,201,146,59,198,237,	0,486,1254,2044,2796,4991,
#Partially deleted in new
chr9	128122465	128127724	chr9:128122465-128127724	0	-	128122465	128127717	789624	6	14,201,150,59,93,286,	0,468,1236,2026,2778,4973,
#Partially deleted in new
chr9	128122990	128128395	chr9:128122990-128128395	0	-	128122990	128122990	8553170	5	144,150,59,198,148,	0,711,1501,2253,5257,
#Partially deleted in new
chr9	128123007	128127709	chr9:128123007-128127709	0	-	128123007	128123007	8553170	6	127,150,59,93,198,271,	0,694,1484,1771,2236,4431,
#Partially deleted in new
chr9	128123121	128128418	chr9:128123121-128128418	0	-	128123121	128123121	8553170	6	13,150,59,93,198,171,	0,580,1370,1657,2122,5126,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	128124330	128127711	chr9:128124330-128127711	0	-	128124330	128124330	8553170	4	220,93,198,273,	0,448,913,3108,
#Partially deleted in new
chr9	128125243	128128114	chr9:128125243-128128114	0	-	128125243	128125243	8553170	2	198,60,	0,2811,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	128128528	128130628	chr9:128128528-128130628	3	+	128128528	128128528	789624	1	2100,	0,
#Partially deleted in new
chr9	128149070	128153133	chr9:128149070-128153133	3	+	128149525	128153119	0	7	194,181,137,80,120,102,34,	0,412,1167,2567,2835,3112,4029,
#Partially deleted in new
chr9	128149440	128153453	chr9:128149440-128153453	0	+	128149440	128149440	8553170	7	223,182,80,120,102,27,143,	0,934,2197,2465,2742,3659,3870,
#Partially deleted in new
chr9	128149452	128153455	chr9:128149452-128153455	1	+	128149525	128153119	0	7	211,137,80,120,102,27,145,	0,785,2185,2453,2730,3647,3858,
#Partially deleted in new
chr9	128149471	128150609	chr9:128149471-128150609	0	+	128149471	128149471	8553170	2	192,235,	0,903,
#Partially deleted in new
chr9	128149517	128153139	chr9:128149517-128153139	1	+	128149525	128153119	789624	7	146,137,13,73,120,102,40,	0,720,1931,2127,2388,2665,3582,
#Deleted in new
chr9	128151499	128153328	chr9:128151499-128153328	0	+	128151499	128151499	8553170	5	218,120,102,27,18,	0,406,683,1600,1811,
#Deleted in new
chr9	128151668	128153453	chr9:128151668-128153453	0	+	128151668	128151668	8553170	4	49,120,102,354,	0,237,514,1431,
#Partially deleted in new
chr9	128160259	128163928	chr9:128160259-128163928	3	+	128160407	128163615	789624	2	227,486,	0,3183,
#Partially deleted in new
chr9	128160313	128163890	chr9:128160313-128163890	0	+	128160313	128160313	8553170	3	173,949,448,	0,1690,3129,
#Partially deleted in new
chr9	128160358	128163546	chr9:128160358-128163546	0	+	128160358	128160358	8553170	3	128,341,104,	0,1645,3084,
#Partially deleted in new
chr9	128160459	128163737	chr9:128160459-128163737	0	+	128160459	128160459	8553170	3	27,112,295,	0,1544,2983,
#Partially deleted in new
chr9	128166063	128169461	chr9:128166063-128169461	0	-	128166063	128166063	8553170	5	343,122,70,126,56,	0,695,1031,3012,3342,
#Partially deleted in new
chr9	128166064	128191568	chr9:128166064-128191568	1	-	128166196	128190857	789624	17	342,122,70,150,114,88,125,198,122,196,343,109,94,230,116,175,137,	0,694,1030,2987,3341,3955,10286,11501,12304,12644,13008,14350,14656,19482,24264,24623,25367,
#Partially deleted in new
chr9	128166064	128167473	chr9:128166064-128167473	0	-	128166064	128166064	8553170	3	342,122,379,	0,694,1030,
#Partially deleted in new
chr9	128166065	128191589	chr9:128166065-128191589	1	-	128166196	128190857	789624	18	341,122,70,150,114,88,125,198,122,196,427,109,94,230,72,116,175,158,	0,693,1029,2986,3340,3954,10285,11500,12303,12643,12923,14349,14655,19481,21797,24263,24622,25366,
#Partially deleted in new
chr9	128166065	128190857	chr9:128166065-128190857	1	-	128166196	128190857	789624	18	341,122,70,150,114,88,125,198,122,196,427,109,94,230,72,116,26,45,	0,693,1029,2986,3340,3954,10285,11500,12303,12643,12923,14349,14655,19481,21797,24263,24622,24747,
#Partially deleted in new
chr9	128166065	128191939	chr9:128166065-128191939	1	-	128166196	128191939	789624	18	341,122,70,150,114,78,88,125,198,122,707,109,94,230,72,116,175,85,	0,693,1029,2986,3340,3557,3954,10285,11500,12303,12643,14349,14655,19481,21797,24263,24622,25789,
#Partially deleted in new
chr9	128166066	128167683	chr9:128166066-128167683	0	-	128166066	128166066	8553170	4	340,122,70,145,	0,692,1028,1472,
#Partially deleted in new
chr9	128166068	128191572	chr9:128166068-128191572	1	-	128166196	128187917	789624	16	338,122,70,150,114,88,125,198,122,707,109,94,230,72,175,141,	0,690,1026,2983,3337,3951,10282,11497,12300,12640,14346,14652,19478,21794,24619,25363,
#Partially deleted in new
chr9	128166070	128190860	chr9:128166070-128190860	1	-	128166196	128190857	789624	17	336,122,70,150,114,88,125,198,122,196,427,109,94,230,72,116,173,	0,688,1024,2981,3335,3949,10280,11495,12298,12638,12918,14344,14650,19476,21792,24258,24617,
#Partially deleted in new
chr9	128166070	128204383	chr9:128166070-128204383	1	-	128166196	128190857	789624	18	336,122,70,150,114,88,125,198,122,196,343,109,94,230,72,116,175,198,	0,688,1024,2981,3335,3949,10280,11495,12298,12638,13002,14344,14650,19476,21792,24258,24617,38115,
#Partially deleted in new
chr9	128166072	128191589	chr9:128166072-128191589	1	-	128166196	128190857	789624	17	334,122,70,150,114,88,125,198,122,707,109,94,230,72,116,175,158,	0,686,1022,2979,3333,3947,10278,11493,12296,12636,14342,14648,19474,21790,24256,24615,25359,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr9	128166088	128204224	chr9:128166088-128204224	3	-	128166196	128190857	789624	20	318,122,70,150,114,88,125,198,122,707,109,94,230,72,116,175,57,265,173,157,	0,670,1006,2963,3317,3931,10262,11477,12280,12620,14326,14632,19458,21774,24240,24599,32222,33831,36675,37979,
#Partially deleted in new
chr9	128166151	128190710	chr9:128166151-128190710	0	-	128166196	128190710	789624	15	255,122,70,150,114,88,125,198,122,707,109,79,230,116,23,	0,607,943,2900,3254,3868,10199,11414,12217,12557,14263,14569,19395,24177,24536,
#Partially deleted in new
chr9	128166268	128177608	chr9:128166268-128177608	0	-	128166268	128177608	789624	9	138,122,70,150,114,78,88,125,43,	0,490,826,2783,3137,3354,3751,10082,11297,
#Partially deleted in new
chr9	128166306	128166997	chr9:128166306-128166997	0	-	128166306	128166306	8553170	2	100,239,	0,452,
#Partially deleted in new
chr9	128166620	128169103	chr9:128166620-128169103	0	-	128166620	128166620	8553170	2	544,52,	0,2431,
#Partially deleted in new
chr9	128166758	128191550	chr9:128166758-128191550	0	-	128166758	128166758	8553170	13	122,70,150,114,16,43,109,94,230,72,28,38,119,	0,336,2293,2647,3261,12614,13656,13962,18788,21104,23570,24066,24673,
#Partially deleted in new
chr9	128168734	128169451	chr9:128168734-128169451	0	-	128168734	128168734	8553170	2	467,46,	0,671,
#Deleted in new
chr9	128177568	128179009	chr9:128177568-128179009	0	-	128177568	128177568	8553170	2	195,641,	0,800,
#Partially deleted in new
chr9	128177587	128180798	chr9:128177587-128180798	0	-	128177587	128177587	8553170	6	176,122,196,172,109,78,	0,781,1121,1656,2827,3133,
#Partially deleted in new
chr9	128179050	128191488	chr9:128179050-128191488	0	-	128179050	128179050	8553170	6	365,109,94,188,139,57,	0,1364,1670,6496,11673,12381,
#Partially deleted in new
chr9	128179116	128191557	chr9:128179116-128191557	0	-	128179116	128179116	8553170	6	299,109,79,116,175,126,	0,1298,1604,11212,11571,12315,
#Partially deleted in new
chr9	128179213	128190834	chr9:128179213-128190834	0	-	128179213	128179213	8553170	7	202,109,79,230,72,116,147,	0,1201,1507,6333,8649,11115,11474,
#Partially deleted in new
chr9	128179377	128190858	chr9:128179377-128190858	0	-	128179377	128179377	8553170	5	38,109,94,230,171,	0,1037,1343,6169,11310,
#Partially deleted in new
chr9	128180447	128191777	chr9:128180447-128191777	0	-	128180447	128190857	789624	7	76,94,230,72,116,175,46,	0,273,5099,7415,9881,10240,11284,
#Partially deleted in new
chr9	128180798	128190467	chr9:128180798-128190467	0	-	128180798	128180798	8553170	4	16,230,72,139,	0,4748,7064,9530,
#Partially deleted in new
chr9	128185628	128191452	chr9:128185628-128191452	0	-	128185628	128190857	789624	5	148,72,116,175,173,	0,2234,4700,5059,5651,
#Partially deleted in new
chr9	128191654	128218281	chr9:128191654-128218281	0	+	128191654	128191654	8553170	2	49,51,	0,26576,
#Partially deleted in new
chr9	128191720	128218296	chr9:128191720-128218296	0	+	128191720	128191720	8553170	2	60,66,	0,26510,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	128196846	128204222	chr9:128196846-128204222	0	-	128196846	128196846	8553170	4	1521,265,173,37,	0,3073,5917,7339,
#Partially deleted in new
chr9	128203351	128255244	chr9:128203351-128255244	3	+	128203470	128254714	0	22	280,74,150,204,99,161,143,136,68,139,87,71,52,12,114,110,112,12,171,242,216,591,	0,14879,15230,15697,16636,16829,18845,19109,19441,20899,30669,36093,36376,36633,38880,43042,44023,44572,45231,46763,47373,51302,
#Partially deleted in new
chr9	128203378	128255244	chr9:128203378-128255244	1	+	128203470	128253122	0	23	253,74,150,204,99,161,143,136,68,139,87,71,52,12,114,110,112,12,171,242,216,37,591,	0,14852,15203,15670,16609,16802,18818,19082,19414,20872,30642,36066,36349,36606,38853,43015,43996,44545,45204,46736,47346,49722,51275,
#Partially deleted in new
chr9	128203378	128254055	chr9:128203378-128254055	1	+	128203470	128253122	0	23	253,74,150,204,99,161,143,136,68,139,87,71,52,12,114,110,112,12,171,242,216,37,47,	0,14852,15203,15670,16609,16802,18818,19082,19414,22656,30642,36066,36349,36606,38853,43015,43996,44545,45204,46736,47346,49722,50630,
#Partially deleted in new
chr9	128203387	128255244	chr9:128203387-128255244	1	+	128203470	128253122	0	23	244,74,150,204,99,161,143,136,68,139,87,71,52,12,114,110,112,12,171,242,216,37,591,	0,14843,15194,15661,16600,16793,18809,19073,19405,22647,30633,36057,36340,36597,38844,43006,43987,44536,45195,46727,47337,49713,51266,
#Partially deleted in new
chr9	128203396	128255244	chr9:128203396-128255244	1	+	128203470	128254078	789624	21	235,74,150,204,99,161,143,136,68,139,87,71,52,114,110,112,12,171,242,216,1239,	0,14834,15185,15652,16591,16784,18800,19064,19396,20854,30624,36048,36331,38835,42997,43978,44527,45186,46718,47328,50609,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	128203405	128223954	chr9:128203405-128223954	0	+	128203470	128222203	789624	10	226,74,150,204,99,161,107,143,136,1162,	0,14825,15176,15643,16582,16775,17704,18791,19055,19387,
#Partially deleted in new
chr9	128203414	128255244	chr9:128203414-128255244	1	+	128203470	128254714	0	22	217,74,150,204,99,161,143,136,68,139,87,71,52,12,114,110,112,12,171,242,216,591,	0,14816,15167,15634,16573,16766,18782,19046,19378,22620,30606,36030,36313,36570,38817,42979,43960,44509,45168,46700,47310,51239,
#Partially deleted in new
chr9	128203416	128254876	chr9:128203416-128254876	1	+	128203470	128254714	789624	22	215,74,150,204,99,161,143,136,68,52,87,71,52,12,114,110,112,12,171,242,216,223,	0,14814,15165,15632,16571,16764,18780,19044,19376,22618,30604,36028,36311,36568,38815,42977,43958,44507,45166,46698,47308,51237,
#Partially deleted in new
chr9	128203416	128255246	chr9:128203416-128255246	1	+	128203470	128253122	0	22	215,74,150,204,99,161,143,136,68,139,87,71,52,12,114,110,112,12,171,242,216,2146,	0,14814,15165,15632,16571,16764,18780,19044,19376,20834,30604,36028,36311,36568,38815,42977,43958,44507,45166,46698,47308,49684,
#Partially deleted in new
chr9	128203470	128255024	chr9:128203470-128255024	1	+	128203470	128254686	789624	22	161,74,150,204,99,161,143,136,68,139,87,71,52,12,114,110,112,12,171,242,216,375,	0,14760,15111,15578,16517,16710,18726,18990,19322,20780,30550,35974,36257,36514,38761,42923,43904,44453,45112,46644,47254,51179,
#Partially deleted in new
chr9	128204821	128218299	chr9:128204821-128218299	0	+	128204821	128204821	8553170	2	59,69,	0,13409,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr9	128218242	128242295	chr9:128218242-128242295	0	+	128218242	128234066	789624	14	62,150,204,99,161,143,136,68,87,120,71,52,12,64,	0,339,806,1745,1938,3954,4218,4550,15778,16573,21202,21485,21742,23989,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr9	128218268	128251244	chr9:128218268-128251244	0	+	128218268	128218268	8553170	19	36,150,204,99,161,143,136,68,139,87,71,52,12,114,110,112,830,242,520,	0,313,780,1719,1912,3928,4192,4524,5982,15752,21176,21459,21716,23963,28125,29106,29655,31846,32456,
#Deleted in new
chr9	128218665	128218946	chr9:128218665-128218946	0	+	128218665	128218665	8553170	2	66,89,	0,192,
#Partially deleted in new
chr9	128222528	128242267	chr9:128222528-128242267	0	+	128222528	128232105	789624	9	68,68,139,139,87,71,52,12,36,	0,264,3506,9457,11492,16916,17199,17456,19703,
#Partially deleted in new
chr9	128226137	128232634	chr9:128226137-128232634	0	+	128226137	128226137	8553170	2	36,64,	0,6433,
#Deleted in new
chr9	128232635	128234024	chr9:128232635-128234024	0	+	128232635	128232635	8553170	2	96,4,	0,1385,
#Partially deleted in new
chr9	128233563	128246471	chr9:128233563-128246471	0	+	128233563	128233563	8553170	6	544,71,52,12,114,78,	0,5881,6164,6421,8668,12830,
#Deleted in new
chr9	128239727	128240485	chr9:128239727-128240485	0	+	128239727	128239727	8553170	2	52,59,	0,699,
#Deleted in new
chr9	128240483	128240687	chr9:128240483-128240687	0	+	128240483	128240483	8553170	2	49,51,	0,153,
#Partially deleted in new
chr9	128240511	128247425	chr9:128240511-128247425	0	+	128240511	128240511	8553170	5	21,61,114,110,51,	0,475,1720,5882,6863,
#Partially deleted in new
chr9	128240747	128247391	chr9:128240747-128247391	0	+	128240747	128240747	8553170	5	300,114,110,187,17,	0,1484,5646,6189,6627,
#Partially deleted in new
chr9	128242305	128247384	chr9:128242305-128247384	0	+	128242305	128247384	789624	2	40,60,	0,5019,
#Deleted in new
chr9	128244720	128244830	chr9:128244720-128244830	3	-	128244720	128244720	5263520	1	110,	0,
#Deleted in new
chr9	128244946	128245030	chr9:128244946-128245030	3	-	128244946	128244946	5263520	1	84,	0,
#Deleted in new
chr9	128250801	128254162	chr9:128250801-128254162	0	+	128250801	128253122	789624	3	139,37,157,	0,2299,3204,
#Deleted in new
chr9	128250938	128255248	chr9:128250938-128255248	0	+	128250938	128250938	8553170	2	2199,1243,	0,3067,
#Deleted in new
chr9	128253101	128253834	chr9:128253101-128253834	0	+	128253101	128253101	8553170	2	36,50,	0,683,
#Deleted in new
chr9	128253126	128253979	chr9:128253126-128253979	0	+	128253126	128253126	8553170	2	11,92,	0,761,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr9	128255828	128275989	chr9:128255828-128275989	3	-	128257066	128275976	0	26	1453,157,107,103,219,116,76,225,114,338,88,108,90,142,59,107,94,51,39,81,60,64,44,105,123,97,	0,1540,1772,1961,2151,2626,3178,3338,4247,4636,5343,5625,5839,6734,7205,9756,9959,10141,10458,11365,11629,12105,12288,12591,18021,20064,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr9	128255829	128275989	chr9:128255829-128275989	1	-	128257066	128275976	0	26	1452,157,107,103,219,116,76,225,114,338,88,108,90,142,59,107,94,51,39,81,60,64,44,105,123,97,	0,1539,1771,1960,2150,2625,3177,3337,4246,4635,5342,5624,5838,6733,7204,9755,9958,10140,10457,11364,11628,12104,12287,12590,18020,20063,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	128255831	128275938	chr9:128255831-128275938	1	-	128257066	128273902	789624	8	1450,157,107,103,219,53,77,46,	0,1537,1769,1958,2148,2623,18064,20061,
#Partially deleted in new
chr9	128257066	128275940	chr9:128257066-128275940	1	-	128257066	128275940	789624	26	215,157,107,103,219,116,76,225,114,338,88,108,90,142,59,107,94,51,39,81,60,64,44,105,123,48,	0,302,534,723,913,1388,1940,2100,3009,3398,4105,4387,4601,5496,5967,8518,8721,8903,9220,10127,10391,10867,11050,11353,16783,18826,
#Partially deleted in new
chr9	128257086	128260560	chr9:128257086-128260560	1	-	128257086	128260560	789624	8	150,42,219,116,76,225,114,96,	0,764,893,1368,1920,2080,2989,3378,
#Partially deleted in new
chr9	128258544	128260514	chr9:128258544-128260514	0	-	128258544	128258544	8553170	4	26,76,225,439,	0,462,622,1531,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	128258712	128259246	chr9:128258712-128259246	0	-	128258712	128258712	8553170	2	370,80,	0,454,
#Deleted in new
chr9	128260125	128260991	chr9:128260125-128260991	0	-	128260125	128260125	8553170	2	64,527,	0,339,
#Deleted in new
chr9	128260665	128261223	chr9:128260665-128261223	0	-	128260665	128260665	8553170	2	119,356,	0,202,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	128261120	128261970	chr9:128261120-128261970	0	-	128261120	128261120	8553170	3	139,108,303,	0,333,547,
#Partially deleted in new
chr9	128261171	128275995	chr9:128261171-128275995	0	-	128261171	128275976	789624	17	88,108,90,142,59,107,94,51,39,81,60,64,44,105,81,123,103,	0,282,496,1391,1862,4413,4616,4798,5115,6022,6286,6762,6945,7248,11613,12678,14721,
#Partially deleted in new
chr9	128261191	128267202	chr9:128261191-128267202	0	-	128261191	128261191	8553170	8	68,108,90,530,107,94,51,916,	0,262,476,1371,4393,4596,4778,5095,
#Partially deleted in new
chr9	128261684	128265937	chr9:128261684-128265937	0	-	128261684	128261684	8553170	5	73,142,59,107,150,	0,878,1349,3900,4103,
#Partially deleted in new
chr9	128263033	128272865	chr9:128263033-128272865	0	-	128263033	128272865	789624	10	59,107,94,51,39,60,64,44,105,81,	0,2551,2754,2936,3253,4424,4900,5083,5386,9751,
#Deleted in new
chr9	128273639	128275987	chr9:128273639-128275987	1	-	128273756	128275976	789624	2	333,95,	0,2253,
#Partially deleted in new
chr9	128275378	128288733	chr9:128275378-128288733	1	+	128275407	128288716	789624	5	118,49,122,95,82,	0,1328,9131,10560,13273,
#Partially deleted in new
chr9	128275438	128288978	chr9:128275438-128288978	0	+	128275438	128288716	789624	6	58,49,48,122,95,327,	0,1268,3195,9071,10500,13213,
#Partially deleted in new
chr9	128276145	128288988	chr9:128276145-128288988	3	+	128276145	128288716	789624	5	257,169,122,95,337,	0,441,8364,9793,12506,
#Partially deleted in new
chr9	128276221	128288990	chr9:128276221-128288990	1	+	128276340	128288716	789624	5	181,169,122,95,339,	0,365,8288,9717,12430,
#Partially deleted in new
chr9	128276241	128286534	chr9:128276241-128286534	1	+	128276340	128286041	789624	4	161,169,122,596,	0,345,8268,9697,
#Partially deleted in new
chr9	128276243	128288989	chr9:128276243-128288989	1	+	128276340	128288716	789624	5	159,49,122,95,338,	0,463,8266,9695,12408,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	128305160	128322742	chr9:128305160-128322742	3	-	128309549	128322408	789624	8	4715,137,73,82,62,75,132,443,	0,5726,6368,8647,10406,11991,16438,17139,
#Partially deleted in new
chr9	128309692	128322413	chr9:128309692-128322413	0	-	128309692	128309692	8553170	9	183,137,73,82,62,75,75,132,114,	0,1194,1836,4115,5874,6129,7459,11906,12607,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	128309783	128311354	chr9:128309783-128311354	0	-	128309783	128309783	8553170	2	92,468,	0,1103,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	128316336	128316909	chr9:128316336-128316909	3	+	128316336	128316336	8553170	1	573,	0,
#Partially deleted in new
chr9	128322535	128334072	chr9:128322535-128334072	3	+	128322858	128333645	789624	7	393,132,97,103,130,94,599,	0,480,2607,3243,9617,10314,10938,
#Partially deleted in new
chr9	128322543	128323586	chr9:128322543-128323586	1	+	128322858	128323206	789624	2	385,571,	0,472,
#Partially deleted in new
chr9	128322581	128323584	chr9:128322581-128323584	1	+	128322858	128323371	789624	3	347,132,302,	0,434,701,
#Partially deleted in new
chr9	128322851	128326400	chr9:128322851-128326400	1	+	128322858	128325935	789624	4	77,132,97,622,	0,164,2291,2927,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	128330411	128334068	chr9:128330411-128334068	0	+	128330411	128330411	8553170	2	2532,595,	0,3062,
#Partially deleted in new
chr9	128340645	128361217	chr9:128340645-128361217	1	+	128340762	128360491	789624	6	193,155,13,165,147,884,	0,2481,14532,14752,15004,19688,
#Partially deleted in new
chr9	128340727	128361470	chr9:128340727-128361470	3	+	128343132	128360491	789624	13	111,167,395,159,70,92,110,210,127,138,165,147,1137,	0,2399,4427,7817,9584,9756,11910,12297,12687,14325,14670,14922,19606,
#Deleted in new
chr9	128342152	128342770	chr9:128342152-128342770	7	+	128342152	128342152	16724991	1	618,	0,
#Partially deleted in new
chr9	128371318	128392016	chr9:128371318-128392016	3	+	128371380	128389734	789624	5	97,71,82,49,2351,	0,6717,16497,17942,18347,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	128371360	128390734	chr9:128371360-128390734	1	+	128371380	128387901	789624	3	55,71,2919,	0,6675,16455,
#Partially deleted in new
chr9	128371360	128390090	chr9:128371360-128390090	0	+	128371380	128387860	789624	5	55,112,82,49,425,	0,6634,16455,17900,18305,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	128371370	128388411	chr9:128371370-128388411	1	+	128371380	128387860	789624	3	45,112,596,	0,6624,16445,
#Partially deleted in new
chr9	128371380	128392016	chr9:128371380-128392016	1	+	128371380	128389513	789624	4	35,71,82,2756,	0,6655,16435,17880,
#Partially deleted in new
chr9	128378066	128389869	chr9:128378066-128389869	0	+	128378066	128378066	8553170	3	40,82,609,	0,9749,11194,
#Deleted in new
chr9	128391460	128392016	chr9:128391460-128392016	3	+	128391460	128391460	8553170	1	556,	0,
#Deleted in new
chr9	128392006	128393510	chr9:128392006-128393510	3	-	128392006	128392006	8553170	1	1504,	0,
#Deleted in new
chr9	128392617	128392714	chr9:128392617-128392714	3	-	128392617	128392617	5263520	1	97,	0,
#Deleted in new
chr9	128392620	128392708	chr9:128392620-128392708	3	+	128392620	128392620	5263520	1	88,	0,
#Partially deleted in new
chr9	128411750	128423263	chr9:128411750-128423263	0	+	128422904	128423263	789624	3	322,111,118,	0,11117,11395,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr9	128411765	128437351	chr9:128411765-128437351	1	+	128422904	128435905	789624	14	307,119,2792,118,135,205,120,77,107,133,128,204,253,503,	0,7394,8421,11380,12372,12644,16536,16991,17164,19405,22336,22644,23887,25083,
#Partially deleted in new
chr9	128419113	128424273	chr9:128419113-128424273	0	+	128422904	128424273	789624	4	165,111,118,136,	0,3754,4032,5024,
#Partially deleted in new
chr9	128419606	128428423	chr9:128419606-128428423	0	+	128422904	128428423	789624	6	196,111,118,135,205,122,	0,3261,3539,4531,4803,8695,
#Partially deleted in new
chr9	128420479	128437347	chr9:128420479-128437347	3	+	128420877	128435905	789624	13	595,111,118,135,205,120,77,107,133,128,204,253,499,	0,2388,2666,3658,3930,7822,8277,8450,10691,13622,13930,15173,16369,
#Partially deleted in new
chr9	128420480	128424182	chr9:128420480-128424182	0	+	128422904	128424182	789624	5	594,308,111,118,45,	0,723,2387,2665,3657,
#Deleted in new
chr9	128420480	128421510	chr9:128420480-128421510	0	+	128420480	128420480	8553170	2	594,307,	0,723,
#Partially deleted in new
chr9	128422904	128435905	chr9:128422904-128435905	1	+	128422904	128435905	789624	12	74,118,135,205,120,77,102,4,134,128,204,253,	0,241,1233,1505,5397,5852,6025,6128,8265,11197,11505,12748,
#Partially deleted in new
chr9	128422914	128424269	chr9:128422914-128424269	0	+	128422914	128422914	8553170	2	349,132,	0,1223,
#Partially deleted in new
chr9	128424035	128434607	chr9:128424035-128434607	0	+	128424035	128424035	8553170	8	237,205,120,77,107,133,128,198,	0,374,4266,4721,4894,7135,10066,10374,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	128424205	128428823	chr9:128424205-128428823	0	+	128424205	128424205	8553170	5	67,205,128,120,67,	0,204,3446,4096,4551,
#Partially deleted in new
chr9	128424601	128435755	chr9:128424601-128435755	0	+	128424601	128424601	8553170	6	13,120,77,107,133,103,	0,3700,4155,4328,6569,11051,
#Partially deleted in new
chr9	128428387	128437344	chr9:128428387-128437344	1	+	128436857	128437328	789624	10	34,77,107,133,128,204,253,267,66,160,	0,369,542,2783,5714,6022,7265,8461,8730,8797,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	128430744	128434194	chr9:128430744-128434194	0	+	128430744	128430744	8553170	3	200,45,93,	0,514,3357,
#Partially deleted in new
chr9	128431597	128432006	chr9:128431597-128432006	3	+	128431597	128431597	8553170	1	409,	0,
#Partially deleted in new
chr9	128444586	128446628	chr9:128444586-128446628	7	+	128444586	128444586	16724991	2	1427,307,	0,1735,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	128455185	128471346	chr9:128455185-128471346	0	+	128455331	128471346	789624	5	151,91,126,171,39,	0,4381,5756,13997,16122,
#Partially deleted in new
chr9	128455186	128494833	chr9:128455186-128494833	1	+	128455196	128494731	789624	16	42,91,126,171,161,130,132,72,72,117,186,110,136,111,105,324,	0,4380,5755,13996,16121,17726,18423,26393,27629,28751,29514,30178,32703,37239,37514,39323,
#Partially deleted in new
chr9	128456005	128501292	chr9:128456005-128501292	1	+	128460558	128500255	789624	21	250,91,154,126,171,161,130,132,72,72,117,186,110,136,111,105,159,101,163,126,1226,	0,3561,4507,4936,13177,15302,16907,17604,25574,26810,27932,28695,29359,31884,36420,36695,38504,40035,42407,42995,44061,
#Partially deleted in new
chr9	128456056	128494839	chr9:128456056-128494839	1	+	128456091	128494731	789624	16	199,91,126,171,161,130,132,72,72,117,186,110,136,111,105,330,	0,3510,4885,13126,15251,16856,17553,25523,26759,27881,28644,29308,31833,36369,36644,38453,
#Partially deleted in new
chr9	128456100	128469470	chr9:128456100-128469470	0	+	128456100	128456100	8553170	6	155,240,91,154,126,288,	0,1097,3466,4412,4841,13082,
#Partially deleted in new
chr9	128456128	128461373	chr9:128456128-128461373	0	+	128456128	128456128	8553170	5	127,240,91,117,432,	0,1069,3438,4421,4813,
#Partially deleted in new
chr9	128456151	128500483	chr9:128456151-128500483	1	+	128457405	128500255	789624	21	104,240,91,126,171,161,130,132,72,72,117,186,110,136,111,105,159,101,163,126,417,	0,1046,3415,4790,13031,15156,16761,17458,25428,26664,27786,28549,29213,31738,36274,36549,38358,39889,42261,42849,43915,
#Partially deleted in new
chr9	128456166	128494833	chr9:128456166-128494833	1	+	128460558	128494731	789624	16	89,91,154,69,161,130,132,72,72,117,186,110,136,111,105,324,	0,3400,4346,4775,15141,16746,17443,25413,26649,27771,28534,29198,31723,36259,36534,38343,
#Partially deleted in new
chr9	128456207	128500960	chr9:128456207-128500960	1	+	128460558	128500255	789624	23	48,240,91,142,117,69,171,161,130,132,72,72,117,186,110,136,111,105,159,101,163,126,894,	0,990,3359,3950,4342,4734,12975,15100,16705,17402,25372,26608,27730,28493,29157,31682,36218,36493,38302,39833,42205,42793,43859,
#Partially deleted in new
chr9	128456421	128501292	chr9:128456421-128501292	1	+	128457405	128500255	789624	21	155,240,91,126,171,161,130,132,72,72,117,186,110,136,111,105,159,101,163,126,1226,	0,776,3145,4520,12761,14886,16491,17188,25158,26394,27516,28279,28943,31468,36004,36279,38088,39619,41991,42579,43645,
#Partially deleted in new
chr9	128456423	128494833	chr9:128456423-128494833	1	+	128456544	128494731	789624	16	153,91,69,171,161,130,132,72,72,117,186,110,136,111,105,324,	0,3143,4518,12759,14884,16489,17186,25156,26392,27514,28277,28941,31466,36002,36277,38086,
#Partially deleted in new
chr9	128456432	128471414	chr9:128456432-128471414	0	+	128457405	128471414	789624	6	144,240,91,69,171,107,	0,765,3134,4509,12750,14875,
#Partially deleted in new
chr9	128456449	128485404	chr9:128456449-128485404	0	+	128456544	128485404	789624	11	127,91,126,161,130,132,72,72,117,186,40,	0,3117,4492,14858,16463,17160,25130,26366,27488,28251,28915,
#Partially deleted in new
chr9	128456465	128473741	chr9:128456465-128473741	0	+	128457405	128473741	789624	7	111,240,91,69,161,130,132,	0,732,3101,4476,14842,16447,17144,
#Partially deleted in new
chr9	128456918	128494836	chr9:128456918-128494836	3	+	128457405	128494731	789624	17	145,240,91,69,171,161,130,132,72,72,117,186,110,136,111,105,327,	0,279,2648,4023,12264,14389,15994,16691,24661,25897,27019,27782,28446,30971,35507,35782,37591,
#Partially deleted in new
chr9	128456984	128469234	chr9:128456984-128469234	0	+	128457405	128469234	789624	5	79,240,91,126,52,	0,213,2582,3957,12198,
#Partially deleted in new
chr9	128460558	128500255	chr9:128460558-128500255	1	+	128460558	128500255	789624	19	108,126,171,161,130,132,72,72,117,186,110,136,111,105,159,101,163,126,189,	0,383,8624,10749,12354,13051,21021,22257,23379,24142,24806,27331,31867,32142,33951,35482,37854,38442,39508,
#Partially deleted in new
chr9	128460558	128500255	chr9:128460558-128500255	1	+	128460558	128500255	789624	19	108,69,171,161,130,132,72,72,117,186,110,136,111,105,159,101,163,126,189,	0,383,8624,10749,12354,13051,21021,22257,23379,24142,24806,27331,31867,32142,33951,35482,37854,38442,39508,
#Partially deleted in new
chr9	128468956	128473012	chr9:128468956-128473012	3	-	128468956	128468956	8553170	2	327,80,	0,3976,
#Partially deleted in new
chr9	128492793	128500072	chr9:128492793-128500072	0	+	128492793	128500072	789624	6	12,159,257,163,126,6,	0,1716,3247,5619,6207,7273,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	128497501	128500391	chr9:128497501-128500391	0	+	128497501	128497501	8553170	3	1074,126,325,	0,1499,2565,
#Partially deleted in new
chr9	128504699	128542288	chr9:128504699-128542288	3	+	128504805	128541170	789624	16	205,222,111,149,61,255,232,113,70,143,191,130,105,83,64,1187,	0,4176,10829,17968,18580,18892,20492,22479,22756,28813,29061,31655,33286,34916,35575,36402,
#Partially deleted in new
chr9	128504730	128539877	chr9:128504730-128539877	1	+	128504805	128539714	789624	14	174,222,111,149,61,255,232,113,70,143,191,130,105,262,	0,4145,10798,17937,18549,18861,20461,22448,22725,28782,29030,31624,33255,34885,
#Partially deleted in new
chr9	128523647	128533649	chr9:128523647-128533649	0	+	128523647	128523647	8553170	6	199,232,113,70,27,137,	0,1544,3531,3808,9017,9865,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	128528900	128552410	chr9:128528900-128552410	3	-	128528900	128528900	8553170	4	100,129,306,43,	0,7926,14478,23467,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	128540537	128543686	chr9:128540537-128543686	1	-	128540537	128540537	8553170	2	662,308,	0,2841,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	128543915	128543977	chr9:128543915-128543977	3	+	128543915	128543915	8553170	1	62,	0,
#Partially deleted in new
chr9	128552557	128633662	chr9:128552557-128633662	1	+	128566740	128633334	0	56	139,240,126,141,147,134,145,155,136,102,138,111,78,156,205,182,244,123,218,93,135,149,60,199,105,24,36,48,92,145,182,100,198,147,104,163,132,138,105,209,121,122,133,99,160,77,210,297,113,18,55,197,54,147,148,454,	0,14180,16214,22117,22641,24265,24571,24794,25552,27079,28364,29224,29921,30136,30519,31230,31724,32163,33190,35048,36251,38919,40425,41617,45842,46405,47522,50985,51768,52476,52738,55046,55294,55572,56316,56564,59156,59551,60823,63074,65082,65429,66313,68600,71770,72545,73211,73833,74828,75367,77763,79569,79873,80014,80250,80651,
#Partially deleted in new
chr9	128552586	128633659	chr9:128552586-128633659	1	+	128566740	128633334	789624	56	110,240,126,141,147,134,145,155,136,102,138,111,78,156,205,182,244,123,218,93,135,149,199,105,24,36,48,92,145,182,100,198,147,104,163,15,132,138,105,209,121,122,133,99,160,77,210,297,113,18,55,197,54,147,148,451,	0,14151,16185,22088,22612,24236,24542,24765,25523,27050,28335,29195,29892,30107,30490,31201,31695,32134,33161,35019,36222,38890,41588,45813,46376,47493,50956,51739,52447,52709,55017,55265,55543,56287,56535,57064,59127,59522,60794,63045,65053,65400,66284,68571,71741,72516,73182,73804,74799,75338,77734,79540,79844,79985,80221,80622,
#Partially deleted in new
chr9	128552589	128633658	chr9:128552589-128633658	3	+	128566740	128633334	0	57	107,240,126,141,147,134,145,155,136,102,138,111,78,156,205,182,244,123,218,93,135,149,60,199,105,24,36,48,92,145,182,100,198,147,104,163,15,132,138,105,209,121,122,133,99,160,77,210,297,113,18,55,197,54,147,148,450,	0,14148,16182,22085,22609,24233,24539,24762,25520,27047,28332,29192,29889,30104,30487,31198,31692,32131,33158,35016,36219,38887,40393,41585,45810,46373,47490,50953,51736,52444,52706,55014,55262,55540,56284,56532,57061,59124,59519,60791,63042,65050,65397,66281,68568,71738,72513,73179,73801,74796,75335,77731,79537,79841,79982,80218,80619,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chr9	128552589	128599495	chr9:128552589-128599495	0	+	128552589	128552589	8553170	25	107,240,126,141,147,134,145,155,136,102,138,111,78,156,205,182,244,123,218,93,135,149,199,105,533,	0,14148,16182,22085,22609,24233,24539,24762,25520,27047,28332,29192,29889,30104,30487,31198,31692,32131,33158,35016,36219,38887,41585,45810,46373,
#Partially deleted in new
chr9	128552589	128574735	chr9:128552589-128574735	0	+	128555366	128574735	789624	5	107,51,240,126,61,	0,2759,14148,16182,22085,
#Partially deleted in new
chr9	128552592	128633662	chr9:128552592-128633662	1	+	128566740	128633334	0	55	104,240,126,141,147,134,145,155,136,102,138,111,78,156,205,182,244,123,218,93,135,149,199,105,24,36,48,92,145,182,100,198,147,104,163,132,138,105,209,121,122,133,99,160,77,210,297,113,18,55,197,54,147,148,454,	0,14145,16179,22082,22606,24230,24536,24759,25517,27044,28329,29189,29886,30101,30484,31195,31689,32128,33155,35013,36216,38884,41582,45807,46370,47487,50950,51733,52441,52703,55011,55259,55537,56281,56529,59121,59516,60788,63039,65047,65394,66278,68565,71735,72510,73176,73798,74793,75332,77728,79534,79838,79979,80215,80616,
#Deleted in new
chr9	128552602	128553337	chr9:128552602-128553337	0	+	128552602	128552602	8553170	2	94,257,	0,478,
#Partially deleted in new
chr9	128552745	128566777	chr9:128552745-128566777	0	+	128566740	128566777	789624	2	60,40,	0,13992,
#Partially deleted in new
chr9	128552968	128566774	chr9:128552968-128566774	0	+	128566740	128566774	789624	2	63,37,	0,13769,
#Boundary problem: need 34, got 0, diff 34, mapped 0.0
chr9	128553146	128609261	chr9:128553146-128609261	0	+	128553146	128553146	8553170	34	165,240,141,147,134,145,155,136,102,138,111,78,156,205,182,244,123,218,93,135,149,60,199,105,1153,48,92,145,182,100,198,147,104,140,	0,13591,21528,22052,23676,23982,24205,24963,26490,27775,28635,29332,29547,29930,30641,31135,31574,32601,34459,35662,38330,39836,41028,45253,45816,50396,51179,51887,52149,54457,54705,54983,55727,55975,
#Partially deleted in new
chr9	128553321	128566776	chr9:128553321-128566776	0	+	128566740	128566776	789624	2	61,39,	0,13416,
#Partially deleted in new
chr9	128553331	128566806	chr9:128553331-128566806	0	+	128566740	128566806	789624	2	31,69,	0,13406,
#Partially deleted in new
chr9	128566740	128633335	chr9:128566740-128633335	1	+	128566740	128633334	789624	57	237,126,141,147,134,145,155,136,102,138,111,78,156,205,182,244,123,218,93,135,149,60,199,105,24,36,48,92,145,182,100,198,147,104,163,15,132,138,105,209,121,122,133,99,160,77,210,297,113,18,63,55,197,54,147,148,127,	0,2031,7934,8458,10082,10388,10611,11369,12896,14181,15041,15738,15953,16336,17047,17541,17980,19007,20865,22068,24736,26242,27434,31659,32222,33339,36802,37585,38293,38555,40863,41111,41389,42133,42381,42910,44973,45368,46640,48891,50899,51246,52130,54417,57587,58362,59028,59650,60645,61184,62384,63580,65386,65690,65831,66067,66468,
#Deleted in new
chr9	128580952	128581946	chr9:128580952-128581946	0	+	128580952	128580952	8553170	2	107,165,	0,829,
#Partially deleted in new
chr9	128591579	128593278	chr9:128591579-128593278	0	+	128591579	128591579	8553170	2	46,296,	0,1403,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	128592983	128599704	chr9:128592983-128599704	0	+	128592983	128592983	8553170	3	1390,105,742,	0,5416,5979,
#Partially deleted in new
chr9	128594121	128598726	chr9:128594121-128598726	0	+	128594121	128594121	8553170	2	252,327,	0,4278,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	128595892	128596633	chr9:128595892-128596633	3	+	128595892	128595892	8553170	2	266,262,	0,479,
#Partially deleted in new
chr9	128598485	128604335	chr9:128598485-128604335	0	+	128598485	128601350	789624	6	19,24,36,56,48,10,	0,477,1594,2859,5057,5840,
#Partially deleted in new
chr9	128599963	128607989	chr9:128599963-128607989	0	+	128599963	128599963	8553170	7	152,48,92,145,182,100,138,	0,3579,4362,5070,5332,7640,7888,
#Partially deleted in new
chr9	128605326	128608181	chr9:128605326-128608181	0	+	128605326	128605326	8553170	3	151,100,330,	0,2277,2525,
#Deleted in new
chr9	128608035	128609214	chr9:128608035-128609214	0	+	128608035	128608035	8553170	3	241,104,93,	0,838,1086,
#Deleted in new
chr9	128608938	128609561	chr9:128608938-128609561	0	+	128608938	128608938	8553170	2	39,440,	0,183,
#Deleted in new
chr9	128609238	128609645	chr9:128609238-128609645	0	+	128609238	128609621	789624	2	46,54,	0,353,
#Partially deleted in new
chr9	128611601	128615729	chr9:128611601-128615729	0	+	128611601	128611601	8553170	4	244,138,105,98,	0,507,1779,4030,
#Partially deleted in new
chr9	128611712	128622102	chr9:128611712-128622102	0	+	128611712	128611712	8553170	9	133,138,105,209,121,122,133,99,436,	0,396,1668,3919,5927,6274,7158,9445,9954,
#Partially deleted in new
chr9	128611893	128615808	chr9:128611893-128615808	0	+	128611893	128611893	8553170	3	353,105,177,	0,1487,3738,
#Partially deleted in new
chr9	128618952	128624891	chr9:128618952-128624891	0	+	128618952	128618952	8553170	3	51,99,564,	0,2205,5375,
#Deleted in new
chr9	128624327	128625179	chr9:128624327-128625179	0	+	128624327	128624639	789624	2	497,77,	0,775,
#Deleted in new
chr9	128624865	128625855	chr9:128624865-128625855	0	+	128624865	128624865	8553170	2	314,87,	0,903,
#Deleted in new
chr9	128625911	128626391	chr9:128625911-128626391	0	+	128625911	128626391	789624	2	67,85,	0,395,
#Partially deleted in new
chr9	128625961	128629043	chr9:128625961-128629043	0	+	128625961	128625961	8553170	4	17,297,113,1119,	0,429,1424,1963,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	128626510	128628025	chr9:128626510-128628025	0	+	128626510	128626510	8553170	3	177,176,640,	0,489,875,
#Partially deleted in new
chr9	128627494	128632042	chr9:128627494-128632042	0	+	128627494	128627494	8553170	4	4,18,55,23,	0,430,2826,4525,
#Partially deleted in new
chr9	128629659	128633659	chr9:128629659-128633659	0	+	128629659	128629659	8553170	6	716,197,54,147,148,451,	0,2467,2771,2912,3148,3549,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	128630327	128631685	chr9:128630327-128631685	3	-	128630327	128630327	8553170	2	321,254,	0,1104,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	128630418	128633648	chr9:128630418-128633648	0	+	128630418	128630418	8553170	6	156,527,54,147,148,440,	0,1378,2012,2153,2389,2790,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	128631607	128633646	chr9:128631607-128633646	0	+	128631607	128631607	8553170	5	716,54,147,148,438,	0,823,964,1200,1601,
#Deleted in new
chr9	128632624	128633662	chr9:128632624-128633662	0	+	128632624	128632624	8553170	2	331,454,	0,584,
#Deleted in new
chr9	128632685	128633190	chr9:128632685-128633190	0	+	128632685	128632979	789624	2	33,383,	0,122,
#Partially deleted in new
chr9	128633660	128656787	chr9:128633660-128656787	3	-	128633743	128656726	789624	9	322,158,233,168,110,158,110,249,247,	0,565,1028,1431,1997,2620,3257,7030,22880,
#Deleted in new
chr9	128634694	128636063	chr9:128634694-128636063	0	-	128634694	128634694	8553170	3	227,168,406,	0,397,963,
#Partially deleted in new
chr9	128635178	128656681	chr9:128635178-128656681	0	-	128635178	128635178	8553170	5	81,110,158,249,141,	0,479,1102,5512,21362,
#Deleted in new
chr9	128635322	128637028	chr9:128635322-128637028	0	-	128635322	128635322	8553170	3	445,158,111,	0,958,1595,
#Partially deleted in new
chr9	128635917	128656699	chr9:128635917-128656699	0	-	128636137	128656699	789624	4	521,110,249,159,	0,1000,4773,20623,
#Partially deleted in new
chr9	128636083	128656681	chr9:128636083-128656681	0	-	128636408	128656681	789624	3	355,249,141,	0,4607,20457,
#Partially deleted in new
chr9	128650997	128652145	chr9:128650997-128652145	7	+	128650997	128650997	16724991	3	247,82,198,	0,545,950,
#Partially deleted in new
chr9	128663133	128663578	chr9:128663133-128663578	3	-	128663133	128663133	8553170	2	267,67,	0,378,
#Deleted in new
chr9	128683423	128683991	chr9:128683423-128683991	0	+	128683895	128683991	789624	2	23,212,	0,356,
#Partially deleted in new
chr9	128683654	128696400	chr9:128683654-128696400	1	+	128683895	128694664	0	8	353,58,143,104,114,171,147,1760,	0,7515,8203,9007,9213,9983,10241,10986,
#Partially deleted in new
chr9	128685082	128694734	chr9:128685082-128694734	1	+	128685167	128694664	0	8	131,58,143,104,114,171,147,94,	0,6087,6775,7579,7785,8555,8813,9558,
#Partially deleted in new
chr9	128689225	128696388	chr9:128689225-128696388	3	+	128689582	128694664	0	8	430,58,143,104,114,171,147,1748,	0,1944,2632,3436,3642,4412,4670,5415,
#Partially deleted in new
chr9	128689986	128694664	chr9:128689986-128694664	1	+	128689986	128694664	789624	8	40,58,143,104,114,171,147,24,	0,1183,1871,2675,2881,3651,3909,4654,
#Partially deleted in new
chr9	128689988	128694894	chr9:128689988-128694894	0	+	128689989	128694664	0	8	38,58,143,104,114,171,147,254,	0,1181,1869,2673,2879,3649,3907,4652,
#Deleted in new
chr9	128690249	128691918	chr9:128690249-128691918	0	+	128690249	128690249	8553170	3	478,58,61,	0,920,1608,
#Partially deleted in new
chr9	128690280	128693998	chr9:128690280-128693998	0	+	128690280	128690280	8553170	7	264,58,143,104,114,171,103,	0,889,1577,2381,2587,3357,3615,
#Partially deleted in new
chr9	128690284	128692916	chr9:128690284-128692916	0	+	128690284	128690284	8553170	5	155,58,143,104,49,	0,885,1573,2377,2583,
#Partially deleted in new
chr9	128691077	128692756	chr9:128691077-128692756	0	+	128691077	128691077	8553170	3	150,143,95,	0,780,1584,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	128692350	128692935	chr9:128692350-128692935	0	+	128692350	128692350	8553170	2	415,68,	0,517,
#Partially deleted in new
chr9	128702522	128720918	chr9:128702522-128720918	3	+	128702915	128720606	789624	22	417,241,146,112,128,184,147,110,144,76,169,103,68,64,92,177,63,77,143,108,81,525,	0,2780,3211,4190,4373,4699,10529,10755,10976,11523,11674,12039,12275,12649,12846,14224,15802,16026,17163,17387,17680,17871,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	128709779	128710043	chr9:128709779-128710043	3	+	128709779	128709779	8553170	1	264,	0,
#Partially deleted in new
chr9	128713116	128720740	chr9:128713116-128720740	0	+	128713116	128713116	8553170	5	82,110,144,76,185,	0,161,382,929,7439,
#Partially deleted in new
chr9	128714605	128720010	chr9:128714605-128720010	0	+	128714605	128714605	8553170	8	59,68,64,177,63,77,143,101,	0,192,566,2141,3719,3943,5080,5304,
#Deleted in new
chr9	128720868	128724106	chr9:128720868-128724106	3	-	128721180	128724093	789624	5	634,167,78,137,113,	0,782,1140,1569,3125,
#Deleted in new
chr9	128720869	128724123	chr9:128720869-128724123	1	-	128721180	128724093	789624	5	633,167,78,137,172,	0,781,1139,1568,3082,
#Deleted in new
chr9	128720879	128724127	chr9:128720879-128724127	0	-	128720879	128720879	8553170	4	601,167,78,1690,	0,771,1129,1558,
#Deleted in new
chr9	128721396	128724121	chr9:128721396-128724121	0	-	128721396	128724093	789624	5	134,167,78,137,128,	0,254,612,1041,2597,
#Deleted in new
chr9	128721667	128724109	chr9:128721667-128724109	0	-	128721667	128724093	789624	4	150,78,302,116,	0,341,770,2326,
#Partially deleted in new
chr9	128724444	128733194	chr9:128724444-128733194	3	+	128724444	128724444	789624	2	191,353,	0,8397,
#Partially deleted in new
chr9	128729785	128771893	chr9:128729785-128771893	3	-	128731336	128755565	789624	16	1609,103,98,189,116,120,42,216,174,147,115,177,437,151,252,313,	0,3640,5548,10145,10986,11749,12014,12744,20830,21336,21627,22887,23378,24023,25622,41795,
#Partially deleted in new
chr9	128753317	128771688	chr9:128753317-128771688	0	-	128753317	128753317	8553170	3	283,151,108,	0,491,18263,
#Partially deleted in new
chr9	128753415	128771941	chr9:128753415-128771941	0	-	128753415	128755565	789624	4	185,151,252,127,	0,393,1992,18399,
#Partially deleted in new
chr9	128753814	128772414	chr9:128753814-128772414	0	-	128753814	128755565	789624	3	145,252,63,	0,1593,18537,
#Partially deleted in new
chr9	128787203	128810432	chr9:128787203-128810432	3	+	128787353	128807879	789624	12	173,74,41,62,100,83,160,211,164,161,58,2619,	0,1130,3531,4176,4390,5288,9851,16046,16752,18655,19050,20610,
#Partially deleted in new
chr9	128787269	128797130	chr9:128787269-128797130	0	+	128787269	128787269	8553170	6	107,74,62,100,83,76,	0,1064,4110,4324,5222,9785,
#Partially deleted in new
chr9	128787332	128803448	chr9:128787332-128803448	0	+	128787332	128787332	8553170	9	44,74,76,41,62,100,83,160,199,	0,1001,2541,3402,4047,4261,5159,9722,15917,
#Partially deleted in new
chr9	128787348	128810424	chr9:128787348-128810424	1	+	128787353	128807879	789624	10	28,74,41,62,100,83,160,161,58,2611,	0,985,3386,4031,4245,5143,9706,18510,18905,20465,
#Partially deleted in new
chr9	128818473	128822677	chr9:128818473-128822677	3	+	128818684	128822610	789624	3	712,110,350,	0,2265,3854,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	128819650	128829821	chr9:128819650-128829821	3	-	128822764	128829780	0	12	3183,148,103,99,73,131,50,90,160,126,46,77,	0,4096,4421,5120,5326,6371,6733,6889,7381,9084,9459,10094,
#Partially deleted in new
chr9	128822090	128824822	chr9:128822090-128824822	0	-	128822724	128824822	789624	3	743,103,52,	0,1981,2680,
#Partially deleted in new
chr9	128822797	128826223	chr9:128822797-128826223	0	-	128822797	128822797	8553170	6	36,148,103,99,73,202,	0,949,1274,1973,2179,3224,
#Partially deleted in new
chr9	128825981	128829779	chr9:128825981-128829779	0	-	128825981	128825981	8553170	6	452,90,160,143,46,35,	0,558,1050,2753,3128,3763,
#Partially deleted in new
chr9	128826020	128827210	chr9:128826020-128827210	0	-	128826020	128826020	8553170	4	132,50,90,179,	0,363,519,1011,
#Partially deleted in new
chr9	128832941	128882075	chr9:128832941-128882075	1	-	128833583	128847528	789624	15	702,87,80,187,90,77,121,129,87,150,148,59,180,211,179,	0,798,2381,2539,2837,3055,3860,4743,5109,5276,9712,12411,13738,14491,48955,
#Partially deleted in new
chr9	128832941	128882036	chr9:128832941-128882036	0	-	128832941	128832941	789624	13	702,87,80,187,90,109,121,129,87,150,148,59,140,	0,798,2381,2539,2837,3055,3860,4743,5109,5276,9712,12411,48955,
#Partially deleted in new
chr9	128833112	128882053	chr9:128833112-128882053	3	-	128833583	128845405	0	13	531,87,80,187,90,77,121,129,87,150,148,59,157,	0,627,2210,2368,2666,2884,3689,4572,4938,5105,9541,12240,48784,
#Partially deleted in new
chr9	128833118	128881929	chr9:128833118-128881929	1	-	128833583	128845405	0	12	525,87,80,187,90,77,121,129,87,148,59,33,	0,621,2204,2362,2660,2878,3683,4566,4932,9535,12234,48778,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	128833122	128860532	chr9:128833122-128860532	0	-	128833122	128833122	789624	13	521,87,80,187,90,109,121,129,87,148,165,180,586,	0,617,2200,2358,2656,2874,3679,4562,4928,9531,12230,13557,26824,
#Deleted in new
chr9	128835177	128835511	chr9:128835177-128835511	0	-	128835177	128835177	8553170	2	225,31,	0,303,
#Partially deleted in new
chr9	128836008	128882494	chr9:128836008-128882494	0	-	128836008	128845405	789624	8	65,121,129,87,150,148,59,88,	0,793,1676,2042,2209,6645,9344,46398,
#Partially deleted in new
chr9	128837699	128846857	chr9:128837699-128846857	0	-	128837699	128845405	789624	6	114,87,150,148,59,178,	0,351,518,4954,7653,8980,
#Partially deleted in new
chr9	128837750	128881945	chr9:128837750-128881945	0	-	128837750	128837750	8553170	7	63,87,150,62,148,59,49,	0,300,467,2860,4903,7602,44146,
#Partially deleted in new
chr9	128882111	128918039	chr9:128882111-128918039	3	+	128907164	128916371	789624	4	139,107,2165,1944,	0,3903,25045,33984,
#Partially deleted in new
chr9	128882195	128918036	chr9:128882195-128918036	1	+	128907164	128916371	789624	3	55,2165,1941,	0,24961,33900,
#Partially deleted in new
chr9	128882501	128918034	chr9:128882501-128918034	1	+	128907164	128916371	789624	4	408,107,2165,1939,	0,3513,24655,33594,
#Partially deleted in new
chr9	128884994	128886090	chr9:128884994-128886090	0	+	128884994	128884994	8553170	2	394,76,	0,1020,
#Partially deleted in new
chr9	128912743	128916739	chr9:128912743-128916739	0	+	128912743	128912743	8553170	2	73,644,	0,3352,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	128920894	128942037	chr9:128920894-128942037	3	+	128922323	128941713	0	13	774,118,74,159,76,48,56,63,22,129,117,127,370,	0,1035,1388,6143,12887,13116,15553,15688,16862,19474,19704,20550,20773,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	128920965	128927196	chr9:128920965-128927196	0	+	128922323	128927196	789624	5	319,120,118,74,159,	0,516,964,1317,6072,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr9	128921185	128942037	chr9:128921185-128942037	0	+	128922323	128937804	789624	14	99,187,118,74,159,76,48,56,63,188,129,117,127,370,	0,296,744,1097,5852,12596,12825,15262,15397,16571,19183,19413,20259,20482,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	128921407	128942038	chr9:128921407-128942038	1	+	128922323	128941753	0	12	261,118,74,159,76,48,56,63,129,117,127,371,	0,522,875,5630,12374,12603,15040,15175,18961,19191,20037,20260,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	128921411	128933788	chr9:128921411-128933788	0	+	128922323	128933788	789624	5	190,118,74,159,7,	0,518,871,5626,12370,
#Partially deleted in new
chr9	128921591	128942038	chr9:128921591-128942038	1	+	128922323	128941713	0	12	77,118,74,159,76,48,56,22,129,117,127,371,	0,338,691,5446,12190,12419,14856,16165,18777,19007,19853,20076,
#Partially deleted in new
chr9	128921747	128940442	chr9:128921747-128940442	0	+	128922323	128940442	789624	9	300,74,159,76,48,56,63,22,74,	0,535,5290,12034,12263,14700,14835,16009,18621,
#Partially deleted in new
chr9	128922282	128942041	chr9:128922282-128942041	1	+	128922323	128941713	0	10	74,159,76,48,56,22,129,117,127,374,	0,4755,11499,11728,14165,15474,18086,18316,19162,19385,
#Partially deleted in new
chr9	128922313	128936645	chr9:128922313-128936645	0	+	128922323	128926975	789624	6	43,329,76,48,56,63,	0,4554,11468,11697,14134,14269,
#Partially deleted in new
chr9	128927045	128940709	chr9:128927045-128940709	0	+	128927045	128933738	789624	8	151,131,48,56,63,22,129,111,	0,6681,6965,9402,9537,10711,13323,13553,
#Partially deleted in new
chr9	128934024	128942038	chr9:128934024-128942038	0	+	128934024	128941753	789624	6	34,56,63,129,127,371,	0,2423,2558,6344,7420,7643,
#Partially deleted in new
chr9	128937748	128942038	chr9:128937748-128942038	0	+	128937748	128941579	789624	3	30,129,594,	0,2620,3696,
#Deleted in new
chr9	128940392	128941708	chr9:128940392-128941708	0	+	128940392	128940392	8553170	3	323,127,41,	0,1052,1275,
#Partially deleted in new
chr9	128941477	128957021	chr9:128941477-128957021	3	+	128941533	128957021	789624	5	94,55,74,85,70,	0,7711,11295,14872,15474,
#Deleted in new
chr9	128945529	128947619	chr9:128945529-128947619	3	-	128945686	128947303	789624	1	2090,	0,
#Partially deleted in new
chr9	128947698	129007096	chr9:128947698-129007096	3	+	128947719	129006678	0	44	53,55,74,85,81,45,93,120,212,115,201,90,66,120,127,153,127,88,77,115,121,67,129,140,107,207,170,70,68,196,78,86,146,182,201,93,159,138,75,228,132,74,130,595,	0,1490,5074,8651,9253,10311,11103,11316,20807,21701,23059,25461,31563,32907,33565,34850,35203,35594,35775,37201,38859,39110,39890,40348,42421,45498,45826,46674,47157,47620,50452,50839,51473,51925,53830,54185,55118,55618,57448,57604,57946,58351,58540,58803,
#Partially deleted in new
chr9	128947706	128958054	chr9:128947706-128958054	0	+	128947706	128947706	8553170	6	45,55,74,85,81,41,	0,1482,5066,8643,9245,10307,
#Partially deleted in new
chr9	128948016	128957011	chr9:128948016-128957011	0	+	128948016	128948016	8553170	5	612,55,74,85,60,	0,1172,4756,8333,8935,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	128948958	128952895	chr9:128948958-128952895	0	+	128948958	128948958	8553170	2	285,123,	0,3814,
#Partially deleted in new
chr9	128983513	128985262	chr9:128983513-128985262	0	+	128983513	128983513	8553170	2	37,363,	0,1386,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr9	128984970	129003993	chr9:128984970-129003993	0	+	128984970	128984970	8553170	19	44,121,67,129,140,107,207,170,70,68,196,78,86,146,182,201,93,159,677,	0,1587,1838,2618,3076,5149,8226,8554,9402,9885,10348,13180,13567,14201,14653,16558,16913,17846,18346,
#Partially deleted in new
chr9	128986588	128993230	chr9:128986588-128993230	0	+	128986588	128986588	8553170	6	90,67,129,140,74,34,	0,220,1000,1458,3564,6608,
#Deleted in new
chr9	128993094	128994890	chr9:128993094-128994890	0	+	128993094	128993094	8553170	4	309,170,70,35,	0,430,1278,1761,
#Deleted in new
chr9	128994395	128995200	chr9:128994395-128995200	0	+	128994395	128994395	8553170	2	47,345,	0,460,
#Partially deleted in new
chr9	128995135	128998596	chr9:128995135-128998596	0	+	128995135	128995135	8553170	3	379,78,59,	0,3015,3402,
#Partially deleted in new
chr9	128999600	129001891	chr9:128999600-129001891	0	+	128999600	128999600	8553170	2	205,363,	0,1928,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	129004501	129004998	chr9:129004501-129004998	3	-	129004501	129004501	8553170	1	497,	0,
#Partially deleted in new
chr9	129007035	129028300	chr9:129007035-129028300	3	-	129008683	129028154	789624	11	1756,241,101,90,24,63,93,134,129,142,209,	0,2070,2735,3084,3634,5200,7375,7735,14055,15246,21056,
#Deleted in new
chr9	129007791	129012016	chr9:129007791-129012016	0	-	129007791	129007791	8553170	6	1000,241,15,101,90,1347,	0,1314,1661,1979,2328,2878,
#Partially deleted in new
chr9	129008033	129028214	chr9:129008033-129028214	1	-	129008683	129028154	789624	12	117,108,241,101,90,24,63,93,134,129,142,123,	0,650,1072,1737,2086,2636,4202,6377,6737,13057,14248,20058,
#Partially deleted in new
chr9	129008038	129028279	chr9:129008038-129028279	1	-	129008683	129028154	789624	13	753,241,15,101,90,24,63,12,93,134,129,142,188,	0,1067,1414,1732,2081,2631,4197,4969,6372,6732,13052,14243,20053,
#Deleted in new
chr9	129008136	129013950	chr9:129008136-129013950	0	-	129008136	129008136	8553170	4	655,241,101,3831,	0,969,1634,1983,
#Partially deleted in new
chr9	129008449	129028210	chr9:129008449-129028210	1	-	129008683	129028154	789624	10	342,241,101,90,24,93,134,129,142,119,	0,656,1321,1670,2220,5961,6321,12641,13832,19642,
#Partially deleted in new
chr9	129008449	129028185	chr9:129008449-129028185	1	-	129008683	129028154	789624	12	342,241,15,101,90,24,63,93,134,129,142,94,	0,656,1003,1321,1670,2220,3786,5961,6321,12641,13832,19642,
#Partially deleted in new
chr9	129009226	129028303	chr9:129009226-129028303	0	-	129014892	129028154	789624	8	120,101,90,24,63,93,134,212,	0,544,893,1443,3009,5184,5544,18865,
#Partially deleted in new
chr9	129009735	129028295	chr9:129009735-129028295	0	-	129009735	129009735	8553170	9	136,90,24,63,93,134,129,142,204,	0,384,934,2500,4675,5035,11355,12546,18356,
#Deleted in new
chr9	129011723	129014458	chr9:129011723-129014458	0	-	129011723	129011723	8553170	2	575,48,	0,2687,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	129012229	129021211	chr9:129012229-129021211	0	-	129015801	129021211	789624	5	69,93,134,121,121,	0,2181,2541,3510,8861,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	129014420	129028198	chr9:129014420-129028198	0	-	129015814	129028154	789624	6	83,134,125,129,142,107,	0,350,1319,6670,7861,13671,
#Partially deleted in new
chr9	129036620	129042400	chr9:129036620-129042400	0	+	129036620	129036620	8553170	3	61,239,269,	0,3831,5511,
#Partially deleted in new
chr9	129036645	129072071	chr9:129036645-129072071	0	+	129040594	129067812	789624	14	36,239,211,113,118,137,118,101,116,99,314,54,117,1825,	0,3806,5658,11781,12735,13181,22508,23904,24585,31127,31373,32430,33203,33601,
#Partially deleted in new
chr9	129036933	129072082	chr9:129036933-129072082	3	+	129040594	129070453	789624	16	83,239,211,113,118,137,118,101,116,73,87,99,135,54,117,1836,	0,3518,5370,11493,12447,12893,22220,23616,24297,26310,26611,30839,31264,32142,32915,33313,
#Partially deleted in new
chr9	129060481	129068311	chr9:129060481-129068311	0	+	129060481	129060481	8553170	5	169,116,87,99,114,	0,749,3063,7291,7716,
#Partially deleted in new
chr9	129060551	129063630	chr9:129060551-129063630	0	+	129060551	129060551	8553170	4	99,116,144,86,	0,679,2621,2993,
#Partially deleted in new
chr9	129061296	129068014	chr9:129061296-129068014	0	+	129061296	129061296	8553170	4	50,73,87,242,	0,1947,2248,6476,
#Partially deleted in new
chr9	129063286	129069095	chr9:129063286-129069095	0	+	129063286	129068210	789624	5	30,87,99,338,20,	0,258,4486,4708,5789,
#Deleted in new
chr9	129067507	129068400	chr9:129067507-129068400	0	+	129067507	129067507	8553170	2	364,203,	0,690,
#Deleted in new
chr9	129068933	129069934	chr9:129068933-129069934	0	+	129068933	129068933	8553170	2	42,859,	0,142,
#Deleted in new
chr9	129069258	129072071	chr9:129069258-129072071	0	+	129069258	129069258	8553170	2	707,1825,	0,988,
#Partially deleted in new
chr9	129081099	129090435	chr9:129081099-129090435	3	+	129081131	129089007	789624	8	108,101,85,100,99,129,90,1465,	0,3568,3923,4107,4418,5039,5609,7871,
#Partially deleted in new
chr9	129081110	129090435	chr9:129081110-129090435	1	+	129081131	129089007	789624	7	97,101,85,100,99,90,1465,	0,3557,3912,4096,4407,5598,7860,
#Partially deleted in new
chr9	129081133	129090438	chr9:129081133-129090438	0	+	129081133	129085305	789624	6	74,101,100,99,90,1468,	0,3534,4073,4384,5575,7837,
#Partially deleted in new
chr9	129081139	129089522	chr9:129081139-129089522	0	+	129081139	129085305	789624	5	68,101,100,90,552,	0,3528,4067,5569,7831,
#Deleted in new
chr9	129084598	129085295	chr9:129084598-129085295	0	+	129084598	129084598	8553170	3	170,85,89,	0,424,608,
#Partially deleted in new
chr9	129094809	129110804	chr9:129094809-129110804	3	-	129095396	129110509	0	14	803,138,63,136,123,120,101,179,175,166,54,119,264,322,	0,1188,2440,3203,3439,3721,5056,5701,7073,7590,8203,9378,13004,15673,
#Partially deleted in new
chr9	129095205	129098371	chr9:129095205-129098371	0	-	129095396	129098371	789624	5	407,66,63,136,123,	0,864,2044,2807,3043,
#Partially deleted in new
chr9	129095396	129110782	chr9:129095396-129110782	0	-	129109181	129110509	789624	15	216,138,63,136,123,120,101,179,175,166,54,119,264,99,300,	0,601,1853,2616,2852,3134,4469,5114,6486,7003,7616,8791,12417,13782,15086,
#Partially deleted in new
chr9	129095455	129098036	chr9:129095455-129098036	0	-	129095455	129095455	8553170	4	157,155,63,24,	0,542,1794,2557,
#Partially deleted in new
chr9	129097853	129100266	chr9:129097853-129100266	3	+	129097853	129097853	8553170	2	193,48,	0,2365,
#Partially deleted in new
chr9	129101906	129111189	chr9:129101906-129111189	0	-	129101906	129101906	8553170	5	151,166,54,264,232,	0,493,1106,5907,9051,
#Partially deleted in new
chr9	129102441	129109276	chr9:129102441-129109276	0	-	129109181	129109276	789624	6	124,54,119,264,141,98,	0,571,1746,5372,6321,6737,
#Partially deleted in new
chr9	129104196	129110769	chr9:129104196-129110769	0	-	129109181	129110509	789624	5	110,264,71,99,287,	0,3617,4211,4982,6286,
#Deleted in new
chr9	129107333	129110711	chr9:129107333-129110711	1	-	129107618	129110509	789624	2	744,229,	0,3149,
#Deleted in new
chr9	129107813	129110672	chr9:129107813-129110672	0	-	129107813	129108792	789624	3	264,141,190,	0,949,2669,
#Partially deleted in new
chr9	129110949	129148944	chr9:129110949-129148944	3	+	129111600	129147464	0	11	83,160,98,87,126,118,100,125,101,108,1558,	0,522,9563,12102,18035,20572,23845,25521,26642,31495,36437,
#Partially deleted in new
chr9	129110963	129136556	chr9:129110963-129136556	0	+	129111600	129136556	789624	9	69,160,98,87,105,126,118,100,86,	0,508,9549,12088,17000,18021,20558,23831,25507,
#Partially deleted in new
chr9	129111313	129148945	chr9:129111313-129148945	1	+	129111600	129147464	0	11	318,98,87,105,126,118,100,125,101,108,1559,	0,9199,11738,16650,17671,20208,23481,25157,26278,31131,36073,
#Partially deleted in new
chr9	129111313	129148945	chr9:129111313-129148945	1	+	129111600	129147464	0	9	318,98,126,118,100,125,101,108,1559,	0,9199,17671,20208,23481,25157,26278,31131,36073,
#Partially deleted in new
chr9	129111317	129148946	chr9:129111317-129148946	1	+	129111600	129147464	0	10	314,98,87,126,118,100,125,101,108,1560,	0,9195,11734,17667,20204,23477,25153,26274,31127,36069,
#Partially deleted in new
chr9	129111335	129148946	chr9:129111335-129148946	1	+	129111600	129147464	789624	10	296,116,87,126,118,100,125,101,108,1560,	0,9177,11716,17649,20186,23459,25135,26256,31109,36051,
#Partially deleted in new
chr9	129111408	129148946	chr9:129111408-129148946	1	+	129111600	129147464	789624	4	223,98,108,1560,	0,9104,31036,35978,
#Partially deleted in new
chr9	129111412	129136566	chr9:129111412-129136566	0	+	129111600	129136566	789624	8	219,98,87,105,126,118,100,96,	0,9100,11639,16551,17572,20109,23382,25058,
#Partially deleted in new
chr9	129111413	129148946	chr9:129111413-129148946	1	+	129111600	129147464	0	9	218,98,87,118,100,125,101,108,1560,	0,9099,11638,20108,23381,25057,26178,31031,35973,
#Partially deleted in new
chr9	129111434	129134842	chr9:129111434-129134842	0	+	129127963	129134842	789624	6	197,87,105,126,118,48,	0,11617,16529,17550,20087,23360,
#Partially deleted in new
chr9	129111687	129142552	chr9:129111687-129142552	0	+	129120586	129142552	789624	9	104,98,87,126,118,100,125,101,108,	0,8825,11364,17297,19834,23107,24783,25904,30757,
#Partially deleted in new
chr9	129111687	129148945	chr9:129111687-129148945	1	+	129120586	129147464	789624	10	104,98,87,126,118,100,125,101,108,1559,	0,8825,11364,17297,19834,23107,24783,25904,30757,35699,
#Partially deleted in new
chr9	129111867	129134827	chr9:129111867-129134827	0	+	129120586	129134827	789624	6	86,98,87,126,118,33,	0,8645,11184,17117,19654,22927,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	129119512	129129065	chr9:129119512-129129065	0	+	129120586	129129065	789624	4	224,98,87,81,	0,1000,3539,9472,
#Deleted in new
chr9	129136470	129138111	chr9:129136470-129138111	0	+	129136470	129137827	789624	2	125,520,	0,1121,
#Deleted in new
chr9	129136496	129142982	chr9:129136496-129142982	0	+	129136496	129142900	789624	3	99,101,538,	0,1095,5948,
#Partially deleted in new
chr9	129139381	129147998	chr9:129139381-129147998	1	+	129142444	129147464	789624	3	268,108,612,	0,3063,8005,
#Partially deleted in new
chr9	129140007	129148287	chr9:129140007-129148287	1	+	129142444	129147464	789624	3	144,108,901,	0,2437,7379,
#Deleted in new
chr9	129140007	129143654	chr9:129140007-129143654	1	+	129142444	129143392	789624	3	144,108,280,	0,2437,3367,
#Deleted in new
chr9	129140099	129143087	chr9:129140099-129143087	1	+	129142444	129142806	789624	3	52,108,407,	0,2345,2581,
#Deleted in new
chr9	129140117	129142940	chr9:129140117-129142940	1	+	129142444	129142900	789624	2	34,496,	0,2327,
#Partially deleted in new
chr9	129141645	129147957	chr9:129141645-129147957	1	+	129142444	129147464	789624	3	273,108,571,	0,799,5741,
#Partially deleted in new
chr9	129141953	129148006	chr9:129141953-129148006	1	+	129142444	129147464	789624	3	129,108,620,	0,491,5433,
#Partially deleted in new
chr9	129141993	129147772	chr9:129141993-129147772	1	+	129142444	129147464	789624	3	124,108,386,	0,451,5393,
#Partially deleted in new
chr9	129142024	129147995	chr9:129142024-129147995	1	+	129142444	129147464	789624	3	153,108,609,	0,420,5362,
#Deleted in new
chr9	129170433	129170940	chr9:129170433-129170940	3	+	129170433	129170433	8553170	1	507,	0,
#Deleted in new
chr9	129175551	129178262	chr9:129175551-129178262	3	-	129176837	129178052	789624	1	2711,	0,
#Deleted in new
chr9	129175806	129177575	chr9:129175806-129177575	3	+	129175806	129175806	8553170	3	177,376,143,	0,558,1626,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	129176770	129210548	chr9:129176770-129210548	3	+	129176770	129176770	8553170	2	367,1680,	0,32098,
#Partially deleted in new
chr9	129201314	129209186	chr9:129201314-129209186	0	+	129201314	129201314	8553170	2	241,318,	0,7554,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	129258353	129259846	chr9:129258353-129259846	3	+	129258353	129258353	8553170	3	31,89,846,	0,440,647,
#Partially deleted in new
chr9	129259061	129261581	chr9:129259061-129261581	3	+	129259061	129259061	8553170	2	144,251,	0,2269,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	129282457	129285728	chr9:129282457-129285728	3	+	129282457	129282457	789624	3	235,129,219,	0,472,3052,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	129321015	129324905	chr9:129321015-129324905	3	+	129321015	129321015	8553170	2	31,3114,	0,776,
#Deleted in new
chr9	129328260	129328401	chr9:129328260-129328401	3	+	129328260	129328260	8553170	1	141,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	129332299	129338901	chr9:129332299-129338901	0	+	129332299	129332299	8553170	3	174,224,110,	0,1675,6492,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	129333905	129347399	chr9:129333905-129347399	1	+	129333905	129333905	8553170	4	293,126,308,174,	0,4886,7830,13320,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	129336878	129347464	chr9:129336878-129347464	0	+	129336878	129336878	789624	4	110,126,308,239,	0,1913,4857,10347,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	129341842	129359538	chr9:129341842-129359538	3	+	129341842	129341842	8553170	3	201,141,203,	0,13615,17493,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	129370169	129370461	chr9:129370169-129370461	3	-	129370169	129370169	8553170	1	292,	0,
#Partially deleted in new
chr9	129380135	129380470	chr9:129380135-129380470	7	-	129380135	129380135	16724991	1	335,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	129430651	129447290	chr9:129430651-129447290	3	-	129430651	129430651	8553170	2	1359,487,	0,16152,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	129438215	129439118	chr9:129438215-129439118	3	+	129438215	129438215	8553170	2	444,356,	0,547,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	129446631	129451422	chr9:129446631-129451422	0	-	129446631	129446631	8553170	2	423,36,	0,4755,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	129480604	129482538	chr9:129480604-129482538	3	-	129480604	129480604	8553170	1	1934,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	129483450	129504274	chr9:129483450-129504274	1	+	129483450	129483450	8553170	4	183,91,177,952,	0,5758,9968,19872,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	129488544	129504274	chr9:129488544-129504274	0	+	129488544	129488544	8553170	3	755,180,952,	0,4871,14778,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	129488911	129503430	chr9:129488911-129503430	1	+	129488911	129488911	8553170	4	388,285,180,108,	0,1932,4504,14411,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	129489099	129512679	chr9:129489099-129512679	1	+	129489099	129489099	8553170	2	200,9357,	0,14223,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	129489106	129513668	chr9:129489106-129513668	1	+	129489106	129489106	789624	5	193,118,743,350,250,	0,4371,13290,14216,24312,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	129490818	129503622	chr9:129490818-129503622	1	+	129490818	129490818	8553170	4	310,177,123,300,	0,2600,11578,12504,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	129490991	129513584	chr9:129490991-129513584	0	+	129490991	129490991	8553170	4	137,177,350,166,	0,2427,12331,22427,
#Partially deleted in new
chr9	129491088	129513670	chr9:129491088-129513670	0	+	129491088	129491088	8553170	3	40,152,252,	0,13803,22330,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	129491088	129508516	chr9:129491088-129508516	1	+	129491088	129491088	8553170	4	40,177,300,146,	0,2330,11308,17282,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	129491088	129503425	chr9:129491088-129503425	0	+	129491088	129491088	8553170	3	40,118,103,	0,2389,12234,
#Partially deleted in new
chr9	129491088	129513673	chr9:129491088-129513673	0	+	129491088	129491088	8553170	3	40,177,255,	0,2330,22330,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	129493065	129503573	chr9:129493065-129503573	0	+	129493065	129493065	8553170	2	530,251,	0,10257,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	129493576	129513683	chr9:129493576-129513683	1	+	129493576	129493576	8553170	4	19,350,152,265,	0,9746,11315,19842,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	129495444	129502608	chr9:129495444-129502608	2	+	129495444	129495444	8553170	2	261,212,	0,6952,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	129496008	129503597	chr9:129496008-129503597	0	+	129496008	129496008	8553170	2	80,275,	0,7314,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	129496922	129502857	chr9:129496922-129502857	0	+	129496922	129496922	8553170	2	151,461,	0,5474,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	129498338	129503665	chr9:129498338-129503665	0	+	129498338	129498338	8553170	2	126,343,	0,4984,
#Partially deleted in new
chr9	129501989	129513686	chr9:129501989-129513686	0	+	129501989	129501989	8553170	2	223,159,	0,11538,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	129503001	129513517	chr9:129503001-129513517	0	+	129503001	129503001	8553170	4	138,350,152,99,	0,321,1890,10417,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	129575408	129584556	chr9:129575408-129584556	3	+	129575408	129575408	8553170	4	190,269,80,1910,	0,4642,5070,7238,
#Partially deleted in new
chr9	129608883	129635930	chr9:129608883-129635930	3	+	129632703	129635464	0	4	295,216,253,723,	0,23766,25170,26324,
#Partially deleted in new
chr9	129612224	129620776	chr9:129612224-129620776	3	-	129612346	129620574	789624	7	230,145,163,164,117,91,710,	0,882,1210,3259,7295,7515,7842,
#Partially deleted in new
chr9	129612268	129620743	chr9:129612268-129620743	1	-	129612346	129613208	789624	5	186,145,163,161,141,	0,838,1166,3215,8334,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	129620212	129636131	chr9:129620212-129636131	1	+	129632703	129635464	0	4	108,216,253,924,	0,12437,13841,14995,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	129626152	129636131	chr9:129626152-129636131	1	+	129632703	129635464	0	4	169,216,253,924,	0,6497,7901,9055,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	129626152	129636131	chr9:129626152-129636131	1	+	129634155	129635464	789624	3	169,253,924,	0,7901,9055,
#Partially deleted in new
chr9	129626172	129635930	chr9:129626172-129635930	1	+	129632703	129635464	0	4	123,216,253,723,	0,6477,7881,9035,
#Partially deleted in new
chr9	129626174	129635257	chr9:129626174-129635257	0	+	129632703	129634168	789624	4	121,152,253,50,	0,6475,7879,9033,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	129626199	129633676	chr9:129626199-129633676	1	+	129632703	129633033	789624	2	96,1027,	0,6450,
#Partially deleted in new
chr9	129626199	129635930	chr9:129626199-129635930	1	+	129634155	129635464	789624	3	96,253,723,	0,7854,9008,
#Partially deleted in new
chr9	129626204	129635473	chr9:129626204-129635473	1	+	129632703	129635315	0	4	91,216,168,266,	0,6445,7849,9003,
#Partially deleted in new
chr9	129626443	129635492	chr9:129626443-129635492	1	+	129632703	129635464	0	4	98,216,253,285,	0,6206,7610,8764,
#Partially deleted in new
chr9	129628516	129635271	chr9:129628516-129635271	0	+	129628516	129628516	8553170	5	46,109,152,253,64,	0,90,4133,5537,6691,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	129634603	129642169	chr9:129634603-129642169	1	-	129637789	129641999	789624	5	3854,109,107,182,283,	0,4598,4798,5937,7283,
#Deleted in new
chr9	129636891	129642165	chr9:129636891-129642165	3	-	129637789	129641999	789624	6	1566,87,109,107,182,279,	0,1681,2310,2510,3649,4995,
#Deleted in new
chr9	129636891	129642124	chr9:129636891-129642124	1	-	129638352	129641999	789624	5	1566,87,107,182,238,	0,1681,2510,3649,4995,
#Deleted in new
chr9	129640475	129641282	chr9:129640475-129641282	3	+	129640475	129640475	8553170	2	270,200,	0,607,
#Partially deleted in new
chr9	129665640	129722674	chr9:129665640-129722674	3	+	129665867	129722352	789624	4	486,188,179,458,	0,53590,54955,56576,
#Partially deleted in new
chr9	129712895	129718635	chr9:129712895-129718635	3	-	129712895	129712895	789624	2	366,63,	0,5677,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	129738330	129753047	chr9:129738330-129753047	3	-	129739610	129753012	0	3	1530,83,161,	0,10324,14556,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	129738330	129753019	chr9:129738330-129753019	0	-	129738330	129738330	8553170	4	1530,83,122,133,	0,10324,11190,14556,
#Partially deleted in new
chr9	129791195	129791837	chr9:129791195-129791837	7	+	129791195	129791195	16724991	2	133,211,	0,431,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	129803152	129811281	chr9:129803152-129811281	3	+	129803212	129809583	789624	5	259,266,176,128,1940,	0,920,4035,5752,6189,
#Partially deleted in new
chr9	129803156	129804480	chr9:129803156-129804480	0	+	129803156	129803156	8553170	2	255,408,	0,916,
#Partially deleted in new
chr9	129803267	129810518	chr9:129803267-129810518	0	+	129803267	129810241	789624	3	144,266,292,	0,805,6959,
#Partially deleted in new
chr9	129804357	129810316	chr9:129804357-129810316	0	+	129804357	129804357	8553170	4	122,176,128,90,	0,2830,4547,5869,
#Partially deleted in new
chr9	129812943	129824134	chr9:129812943-129824134	3	-	129813971	129824085	0	5	1279,128,176,266,227,	0,5576,5801,9637,10964,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	129813607	129818781	chr9:129813607-129818781	0	-	129813607	129813607	8553170	3	615,295,37,	0,4745,5137,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	129818322	129823593	chr9:129818322-129823593	0	-	129818322	129818322	8553170	4	325,176,266,288,	0,422,4258,4983,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	129821375	129824104	chr9:129821375-129824104	0	-	129821375	129821375	8553170	2	1471,197,	0,2532,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	129827289	129835275	chr9:129827289-129835275	3	-	129828160	129835221	789624	9	963,99,137,198,78,71,52,60,137,	0,1915,2115,3581,4606,6157,6368,7417,7849,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	129827967	129835254	chr9:129827967-129835254	0	-	129827967	129827967	8553170	6	285,99,137,91,55,116,	0,1237,1437,2903,6744,7171,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	129828427	129834547	chr9:129828427-129834547	0	-	129828427	129828427	8553170	5	876,137,198,78,1101,	0,977,2443,3468,5019,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	129828441	129830685	chr9:129828441-129830685	0	-	129828441	129828441	8553170	2	862,1281,	0,963,
#Partially deleted in new
chr9	129829278	129835863	chr9:129829278-129835863	0	-	129829278	129829278	8553170	7	25,137,198,78,71,52,76,	0,126,1592,2617,4168,4379,6509,
#Partially deleted in new
chr9	129830934	129835281	chr9:129830934-129835281	0	-	129830934	129830934	8553170	5	134,78,71,52,143,	0,961,2512,2723,4204,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	129831409	129833517	chr9:129831409-129833517	0	-	129831409	129831409	8553170	3	323,78,71,	0,486,2037,
#Partially deleted in new
chr9	129834697	129852636	chr9:129834697-129852636	0	+	129834697	129834697	8553170	3	381,112,97,	0,15115,17842,
#Partially deleted in new
chr9	129835416	129858547	chr9:129835416-129858547	0	+	129835416	129835416	8553170	6	83,125,97,54,63,81,	0,14383,17123,20890,22633,23050,
#Partially deleted in new
chr9	129835445	129881838	chr9:129835445-129881838	3	+	129852555	129880273	0	26	54,112,97,54,63,132,97,70,114,79,445,141,116,173,95,34,46,181,127,170,82,109,103,72,177,1372,	0,14367,17094,20861,22604,23021,25491,26097,27740,29857,32559,33416,33864,34226,35007,38036,38253,39130,39383,39864,40114,40684,42892,44127,44667,45021,
#Partially deleted in new
chr9	129835469	129881828	chr9:129835469-129881828	1	+	129852555	129880273	0	25	30,112,97,54,63,132,97,70,114,79,445,141,116,173,95,34,46,181,127,170,82,109,103,72,1716,	0,14343,17070,20837,22580,22997,25467,26073,27716,29833,32535,33392,33840,34202,34983,38012,38229,39106,39359,39840,40090,40660,42868,44103,44643,
#Partially deleted in new
chr9	129835477	129881828	chr9:129835477-129881828	1	+	129852555	129880273	0	26	120,112,97,54,63,132,97,70,114,79,445,141,116,173,95,34,46,181,127,170,82,109,103,72,177,1362,	0,14335,17062,20829,22572,22989,25459,26065,27708,29825,32527,33384,33832,34194,34975,38004,38221,39098,39351,39832,40082,40652,42860,44095,44635,44989,
#Partially deleted in new
chr9	129868321	129878437	chr9:129868321-129878437	0	+	129868321	129868321	8553170	8	128,12,97,127,170,82,109,100,	0,540,6338,6507,6988,7238,7808,10016,
#Partially deleted in new
chr9	129868366	129870152	chr9:129868366-129870152	0	+	129868366	129868366	8553170	4	83,141,116,481,	0,495,943,1305,
#Partially deleted in new
chr9	129869604	129869671	chr9:129869604-129869671	3	+	129869604	129869604	5263520	1	67,	0,
#Partially deleted in new
chr9	129875596	129880518	chr9:129875596-129880518	0	+	129875596	129875596	8553170	6	45,109,103,72,177,140,	0,533,2741,3976,4516,4782,
#Deleted in new
chr9	129879372	129881828	chr9:129879372-129881828	0	+	129879372	129879372	8553170	3	272,177,1362,	0,740,1094,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	129883692	129884170	chr9:129883692-129884170	7	-	129883692	129883692	16724991	2	112,229,	0,249,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr9	129887186	130043194	chr9:129887186-130043194	1	-	129890538	130042975	0	16	3360,159,137,122,133,110,183,198,147,129,105,63,148,57,116,243,	0,8651,12778,13239,15682,21703,36657,37773,40008,42380,70173,71304,91278,92131,107656,155765,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chr9	129887186	130043194	chr9:129887186-130043194	1	-	129890538	130042975	789624	15	3360,159,137,122,133,110,198,147,129,105,63,148,57,116,243,	0,8651,12778,13239,15682,21703,37773,40008,42380,70173,71304,91278,92131,107656,155765,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chr9	129887186	130043162	chr9:129887186-130043162	3	-	129890538	130042975	0	17	3360,159,137,122,133,110,15,183,198,147,129,105,63,148,57,116,211,	0,8651,12778,13239,15682,21703,28779,36657,37773,40008,42380,70173,71304,91278,92131,107656,155765,
#Partially deleted in new
chr9	129895267	129994867	chr9:129895267-129994867	0	-	129895817	129994867	789624	14	729,137,122,133,110,153,198,147,129,105,63,148,57,25,	0,4697,5158,7601,13622,28576,29692,31927,34299,62092,63223,83197,84050,99575,
#Partially deleted in new
chr9	129895811	130043167	chr9:129895811-130043167	1	-	129895817	130042975	0	16	185,137,122,133,110,15,96,198,147,129,105,63,148,57,116,216,	0,4153,4614,7057,13078,20154,28032,29148,31383,33755,61548,62679,82653,83506,99031,147140,
#Partially deleted in new
chr9	129899967	129927227	chr9:129899967-129927227	0	-	129899967	129899967	8553170	6	134,122,133,110,198,33,	0,458,2901,8922,24992,27227,
#Partially deleted in new
chr9	129899992	129916243	chr9:129899992-129916243	0	-	129899992	129899992	8553170	5	109,107,94,110,278,	0,433,2915,8897,15973,
#Partially deleted in new
chr9	129919018	129925069	chr9:129919018-129925069	0	-	129919018	129919018	8553170	2	224,110,	0,5941,
#Partially deleted in new
chr9	129933535	129936541	chr9:129933535-129936541	3	+	129933535	129933535	8553170	2	67,199,	0,2807,
#Partially deleted in new
chr9	129978346	129994935	chr9:129978346-129994935	0	-	129978346	129978346	8553170	3	266,57,93,	0,971,16496,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	130044712	130045081	chr9:130044712-130045081	3	+	130044712	130044712	8553170	1	369,	0,
#Partially deleted in new
chr9	130053425	130140164	chr9:130053425-130140164	3	+	130053932	130135121	789624	18	648,114,51,80,140,38,57,108,134,76,74,118,131,44,50,84,122,5140,	0,22210,22986,23873,26204,30139,32994,37450,38822,46031,47203,47680,50994,54070,71489,74057,75214,81599,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr9	130053425	130140164	chr9:130053425-130140164	1	+	130053932	130135121	789624	20	648,114,51,80,140,38,57,108,134,76,74,118,131,44,57,87,50,84,122,5140,	0,22210,22986,23873,26204,30139,32994,37450,38822,46031,47203,47680,50994,54070,56944,61151,71489,74057,75214,81599,
#Partially deleted in new
chr9	130053705	130140169	chr9:130053705-130140169	1	+	130053932	130135121	789624	19	368,114,51,80,140,38,57,108,134,76,74,118,131,44,57,50,84,122,5145,	0,21930,22706,23593,25924,29859,32714,37170,38542,45751,46923,47400,50714,53790,56664,71209,73777,74934,81319,
#Partially deleted in new
chr9	130053920	130130024	chr9:130053920-130130024	0	+	130053932	130079634	789624	17	153,114,51,76,140,38,57,108,134,76,74,118,131,44,50,84,1385,	0,21715,22491,23378,25709,29644,32499,36955,38327,45536,46708,47185,50499,53575,70994,73562,74719,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chr9	130053924	130136123	chr9:130053924-130136123	1	+	130053932	130135121	789624	20	149,114,51,80,140,38,57,108,134,76,74,118,131,44,53,91,50,84,122,1099,	0,21711,22487,23374,25705,29640,32495,36951,38323,45532,46704,47181,50495,53571,56445,60648,70990,73558,74715,81100,
#Partially deleted in new
chr9	130083301	130090906	chr9:130083301-130090906	0	+	130083301	130083301	8553170	3	301,57,31,	0,3118,7574,
#Partially deleted in new
chr9	130107518	130127531	chr9:130107518-130127531	0	+	130107518	130107518	8553170	4	21,57,50,49,	0,2851,17396,19964,
#Partially deleted in new
chr9	130129590	130133236	chr9:130129590-130133236	0	+	130129590	130129590	8553170	2	397,251,	0,3395,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	130140609	130144219	chr9:130140609-130144219	3	-	130140609	130140609	789624	2	2282,976,	0,2634,
#Partially deleted in new
chr9	130172577	130237304	chr9:130172577-130237304	3	+	130172663	130226487	0	8	150,25,139,79,89,78,116,4315,	0,28380,45254,47147,50072,50504,53811,60412,
#Partially deleted in new
chr9	130193827	130217920	chr9:130193827-130217920	0	+	130193827	130193827	8553170	3	118,25,89,	0,7130,24004,
#Partially deleted in new
chr9	130200431	130233375	chr9:130200431-130233375	1	+	130200601	130226487	0	8	180,25,139,79,89,78,116,386,	0,526,17400,19293,22218,22650,25957,32558,
#Partially deleted in new
chr9	130265881	130434123	chr9:130265881-130434123	3	+	130265881	130433693	789624	98	256,71,159,123,172,107,121,264,145,122,273,142,128,114,150,201,96,128,145,113,160,166,128,255,87,195,131,148,127,155,279,282,109,170,155,97,96,177,158,124,176,97,120,162,282,168,114,87,192,174,114,143,151,219,114,188,97,162,114,203,82,132,144,160,125,184,98,267,191,82,137,142,145,128,100,122,165,108,135,135,191,214,135,191,82,270,150,138,122,238,63,123,132,129,321,120,127,776,	0,18721,19276,20306,28973,29784,30792,33143,36975,37605,38848,40247,40929,41571,44030,53613,54474,54894,55905,59713,59929,61428,72012,75229,76468,81284,82663,83102,83655,85541,87045,88881,89864,90206,91952,92508,93437,94546,96126,96985,98832,99749,99994,102394,103688,105082,106412,107156,108620,109681,109994,110634,111767,113367,116302,116797,117622,118491,118803,119678,120561,122527,125095,125322,125568,126053,127330,127860,128503,129145,129329,130042,130287,131646,132726,133629,134901,136907,137312,137859,138987,140073,141689,142861,144689,152890,156695,158894,159127,159805,161431,161615,162476,163675,164402,165485,166547,167466,
#Partially deleted in new
chr9	130307518	130338606	chr9:130307518-130338606	1	+	130309922	130338533	789624	10	48,150,201,96,128,145,113,160,166,713,	0,2393,11976,12837,13257,14268,18076,18292,19791,30375,
#Partially deleted in new
chr9	130384448	130419582	chr9:130384448-130419582	0	+	130384448	130393858	789624	29	86,114,203,82,132,144,160,125,184,91,267,191,82,137,142,145,128,100,122,165,108,135,135,191,214,135,191,82,811,	0,236,1111,1994,3960,6528,6755,7001,7486,8763,9293,9936,10578,10762,11475,11720,13079,14159,15062,16334,18340,18745,19292,20420,21506,23122,24294,26122,34323,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	130398641	130407252	chr9:130398641-130407252	0	+	130398641	130398641	8553170	8	66,122,165,108,135,135,191,1298,	0,869,2141,4147,4552,5099,6227,7313,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	130400265	130400565	chr9:130400265-130400565	3	+	130400265	130400265	8553170	1	300,	0,
#Partially deleted in new
chr9	130425715	130431438	chr9:130425715-130431438	0	+	130425715	130431438	789624	6	209,63,132,129,321,72,	0,1597,2642,3841,4568,5651,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	130429165	130434121	chr9:130429165-130434121	0	+	130429165	130429165	8553170	2	2321,1693,	0,3263,
#Partially deleted in new
chr9	130444928	130501274	chr9:130444928-130501274	3	+	130452228	130501021	0	15	67,110,69,189,57,75,71,31,91,85,65,132,157,66,299,	0,7295,9376,13472,19182,21796,25905,26556,31942,34787,35456,44404,49938,54576,56047,
#Partially deleted in new
chr9	130444961	130501274	chr9:130444961-130501274	1	+	130452228	130501021	0	16	34,442,110,69,189,57,75,71,31,91,85,65,132,157,66,299,	0,6640,7262,9343,13439,19149,21763,25872,26523,31909,34754,35423,44371,49905,54543,56014,
#Partially deleted in new
chr9	130444987	130501255	chr9:130444987-130501255	1	+	130452228	130501021	0	16	8,62,110,69,189,57,75,71,31,91,85,65,132,157,66,280,	0,5284,7236,9317,13413,19123,21737,25846,26497,31883,34728,35397,44345,49879,54517,55988,
#Partially deleted in new
chr9	130444991	130471513	chr9:130444991-130471513	0	+	130452228	130471513	789624	8	207,110,69,189,57,75,71,29,	0,7232,9313,13409,19119,21733,25842,26493,
#Partially deleted in new
chr9	130452222	130471514	chr9:130452222-130471514	0	+	130452228	130471514	789624	6	111,69,189,75,71,30,	0,2082,6178,14502,18611,19262,
#Partially deleted in new
chr9	130458517	130479898	chr9:130458517-130479898	0	+	130458517	130458517	8553170	7	72,57,75,71,31,91,183,	0,5593,8207,12316,12967,18353,21198,
#Partially deleted in new
chr9	130466473	130489404	chr9:130466473-130489404	0	+	130466473	130466473	8553170	7	326,71,31,84,38,65,72,	0,4360,5011,10397,13289,13911,22859,
#Partially deleted in new
chr9	130476283	130489429	chr9:130476283-130489429	0	+	130476283	130476283	8553170	5	106,91,85,65,97,	0,587,3432,4101,13049,
#Partially deleted in new
chr9	130476548	130489421	chr9:130476548-130489421	0	+	130476548	130476548	8553170	4	413,85,65,89,	0,3167,3836,12784,
#Partially deleted in new
chr9	130479855	130501178	chr9:130479855-130501178	0	+	130479855	130479855	8553170	6	44,65,132,157,66,203,	0,529,9477,15011,19649,21120,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	130578964	130582086	chr9:130578964-130582086	0	+	130578964	130578964	8553170	2	800,1428,	0,1694,
#Partially deleted in new
chr9	130579605	130638352	chr9:130579605-130638352	3	+	130579680	130637022	789624	19	159,106,34,50,72,58,163,99,105,103,101,142,161,74,81,77,72,128,1339,	0,15877,30348,32850,33350,34682,36749,38191,40748,43102,44005,46758,51022,51951,52336,52596,55061,56393,57408,
#Partially deleted in new
chr9	130581094	130613022	chr9:130581094-130613022	0	+	130581094	130581094	8553170	5	419,106,34,50,67,	0,14388,28859,31361,31861,
#Partially deleted in new
chr9	130620413	130632022	chr9:130620413-130632022	0	+	130620413	130620413	8553170	8	45,103,101,142,161,133,74,81,	0,2294,3197,5950,10214,10747,11143,11528,
#Deleted in new
chr9	130626296	130626363	chr9:130626296-130626363	3	+	130626296	130626296	5263520	1	67,	0,
#Deleted in new
chr9	130634620	130637051	chr9:130634620-130637051	0	+	130634620	130634620	8553170	3	118,128,38,	0,1378,2393,
#Deleted in new
chr9	130635863	130637233	chr9:130635863-130637233	0	+	130635863	130635863	8553170	2	263,220,	0,1150,
#Deleted in new
chr9	130651798	130652383	chr9:130651798-130652383	7	+	130651798	130651798	16724991	1	585,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	130664593	130682981	chr9:130664593-130682981	3	+	130664653	130681669	0	5	283,191,156,112,1734,	0,2014,3564,13935,16654,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	130693720	130704861	chr9:130693720-130704861	3	+	130693791	130703774	0	9	193,102,46,90,66,69,177,129,1168,	0,1771,3861,4441,5608,7146,8413,9332,9973,
#Partially deleted in new
chr9	130693720	130703774	chr9:130693720-130703774	0	+	130693720	130693720	8553170	6	193,102,66,168,129,81,	0,1771,5608,8422,9332,9973,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	130693759	130704894	chr9:130693759-130704894	1	+	130693791	130703774	0	8	154,102,46,90,66,168,129,1201,	0,1732,3822,4402,5569,8383,9293,9934,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	130693774	130704861	chr9:130693774-130704861	0	+	130693774	130693774	8553170	8	139,115,670,66,69,177,129,1168,	0,1717,3807,5554,7092,8359,9278,9919,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	130693779	130704861	chr9:130693779-130704861	1	+	130693791	130703774	789624	9	134,102,46,90,66,69,153,129,1168,	0,1712,3802,4382,5549,7087,8378,9273,9914,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	130693779	130699791	chr9:130693779-130699791	0	+	130693779	130693779	8553170	3	134,102,463,	0,1712,5549,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	130693785	130704861	chr9:130693785-130704861	1	+	130693791	130703774	0	8	128,102,46,66,69,177,129,1168,	0,1706,3796,5543,7081,8348,9267,9908,
#Partially deleted in new
chr9	130693786	130702293	chr9:130693786-130702293	0	+	130693791	130702293	789624	7	127,102,46,90,66,69,106,	0,1705,3795,4375,5542,7080,8401,
#Partially deleted in new
chr9	130693805	130699681	chr9:130693805-130699681	0	+	130693805	130693805	8553170	5	108,102,46,90,353,	0,1686,3776,4356,5523,
#Partially deleted in new
chr9	130693805	130703181	chr9:130693805-130703181	0	+	130693805	130703181	789624	7	108,102,46,90,66,168,129,	0,1686,3776,4356,5523,8337,9247,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	130700841	130704861	chr9:130700841-130704861	0	+	130700841	130700841	8553170	3	1469,129,1168,	0,2211,2852,
#Partially deleted in new
chr9	130713945	130885683	chr9:130713945-130885683	3	+	130714319	130885683	0	11	510,174,296,273,85,178,185,153,90,165,1715,	0,140118,140855,148817,158183,158914,160922,164469,166122,166554,170023,
#Partially deleted in new
chr9	130713979	130854122	chr9:130713979-130854122	0	+	130714319	130854122	789624	2	476,56,	0,140087,
#Partially deleted in new
chr9	130724785	130725050	chr9:130724785-130725050	7	-	130724785	130724785	16724991	1	265,	0,
#Partially deleted in new
chr9	130835065	130887675	chr9:130835065-130887675	1	+	130835446	130885683	0	11	460,174,296,273,85,178,185,153,90,165,3707,	0,18998,19735,27697,37063,37794,39802,43349,45002,45434,48903,
#Deleted in new
chr9	130892701	130896812	chr9:130892701-130896812	3	-	130893427	130893838	789624	3	1137,285,236,	0,2995,3875,
#Deleted in new
chr9	130893427	130893838	chr9:130893427-130893838	1	-	130893427	130893838	789624	1	411,	0,
#Partially deleted in new
chr9	130902437	130939068	chr9:130902437-130939068	3	-	130904063	130938607	0	8	1886,180,97,137,160,480,113,66,	0,2796,9354,21306,21799,27129,36098,36565,
#Partially deleted in new
chr9	130902439	130938850	chr9:130902439-130938850	1	-	130904063	130938607	0	7	1884,180,97,137,160,480,315,	0,2794,9352,21304,21797,27127,36096,
#Partially deleted in new
chr9	130902439	130929979	chr9:130902439-130929979	0	-	130903947	130929979	789624	5	1633,97,137,160,413,	0,9352,21304,21797,27127,
#Partially deleted in new
chr9	130903675	130936376	chr9:130903675-130936376	1	-	130904063	130929644	789624	7	648,180,97,137,160,480,166,	0,1558,8116,20068,20561,25891,32535,
#Partially deleted in new
chr9	130911870	130939140	chr9:130911870-130939140	0	-	130911870	130938607	789624	6	18,137,160,480,113,138,	0,11873,12366,17696,26665,27132,
#Partially deleted in new
chr9	130933850	130945520	chr9:130933850-130945520	3	+	130933850	130933850	8553170	3	71,93,298,	0,10429,11372,
#Deleted in new
chr9	130938016	130939286	chr9:130938016-130939286	0	-	130938016	130938016	8553170	3	199,113,73,	0,519,1197,
#Deleted in new
chr9	130938016	130939139	chr9:130938016-130939139	0	-	130938016	130938016	8553170	3	199,113,137,	0,519,986,
#Partially deleted in new
chr9	131009081	131093059	chr9:131009081-131093059	3	+	131009214	131091787	789624	28	506,305,131,167,189,118,99,137,111,193,116,219,189,246,154,143,179,142,206,77,135,148,150,103,200,147,100,1523,	0,17203,22963,27084,29782,30049,32555,36442,39938,43409,43768,47847,51953,57878,58996,59826,60590,62402,63548,64163,66749,68105,70067,72977,76442,78394,78636,82455,
#Partially deleted in new
chr9	131009173	131092109	chr9:131009173-131092109	0	+	131009173	131009173	8553170	9	414,305,131,167,189,118,99,44,436,	0,17111,22871,26992,29690,29957,32463,36350,82500,
#Deleted in new
chr9	131021167	131021306	chr9:131021167-131021306	3	-	131021167	131021167	8553170	1	139,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	131079242	131094473	chr9:131079242-131094473	0	+	131079242	131091787	789624	6	56,103,116,147,100,2937,	0,2816,6365,8233,8475,12294,
#Partially deleted in new
chr9	131085824	131092043	chr9:131085824-131092043	0	+	131085824	131085824	8553170	4	47,147,100,507,	0,1651,1893,5712,
#Partially deleted in new
chr9	131096475	131123152	chr9:131096475-131123152	3	+	131096629	131120322	0	7	185,62,78,67,42,163,2918,	0,326,9712,15121,18101,21280,23759,
#Partially deleted in new
chr9	131096529	131123145	chr9:131096529-131123145	0	+	131096629	131111610	789624	6	131,84,67,42,163,2911,	0,250,15067,18047,21226,23705,
#Partially deleted in new
chr9	131096541	131123145	chr9:131096541-131123145	1	+	131096629	131120322	0	6	119,62,67,42,163,2911,	0,260,15055,18035,21214,23693,
#Partially deleted in new
chr9	131096541	131123145	chr9:131096541-131123145	1	+	131096629	131120322	0	6	119,62,67,18,163,2911,	0,260,15055,18035,21214,23693,
#Partially deleted in new
chr9	131096550	131123145	chr9:131096550-131123145	1	+	131096629	131120249	0	6	110,62,67,42,92,2911,	0,251,15046,18026,21205,23684,
#Partially deleted in new
chr9	131096555	131121603	chr9:131096555-131121603	1	+	131096629	131121122	789624	6	105,62,67,42,80,493,	0,246,15041,18021,21200,24555,
#Partially deleted in new
chr9	131096555	131114277	chr9:131096555-131114277	0	+	131096555	131096555	8553170	5	105,62,268,67,397,	0,246,11342,15041,17325,
#Partially deleted in new
chr9	131096844	131112457	chr9:131096844-131112457	0	+	131096844	131096844	8553170	2	19,861,	0,14752,
#Partially deleted in new
chr9	131098148	131120343	chr9:131098148-131120343	1	+	131114584	131120249	789624	5	108,67,42,92,109,	0,13448,16428,19607,22086,
#Partially deleted in new
chr9	131111401	131120438	chr9:131111401-131120438	1	+	131114584	131120322	789624	4	262,42,163,204,	0,3175,6354,8833,
#Partially deleted in new
chr9	131125560	131234670	chr9:131125560-131234670	3	+	131125704	131233487	0	36	189,196,152,199,71,64,104,107,67,127,162,475,176,95,87,150,159,104,183,86,84,264,162,100,76,79,85,62,1800,71,157,153,172,140,25,1217,	0,1963,2771,3718,5205,7035,7545,9337,10379,13720,14988,18719,20568,21929,24763,25055,26175,33822,37430,38309,38500,48494,49899,52750,61728,63492,66647,69672,71655,76086,89651,97217,102599,105069,106723,107893,
#Partially deleted in new
chr9	131125585	131234663	chr9:131125585-131234663	1	+	131125704	131233487	0	36	164,196,152,199,71,64,104,107,67,127,162,475,143,98,87,150,159,104,183,86,84,264,162,100,76,79,85,62,1800,71,157,153,172,140,25,1210,	0,1938,2746,3693,5180,7010,7520,9312,10354,13695,14963,18694,20576,21901,24738,25030,26150,33797,37405,38284,38475,48469,49874,52725,61703,63467,66622,69647,71630,76061,89626,97192,102574,105044,106698,107868,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chr9	131126033	131233701	chr9:131126033-131233701	1	+	131144698	131233487	789624	26	140,163,176,95,87,150,159,104,183,86,84,264,162,100,76,79,85,62,1800,71,157,153,172,140,25,248,	0,18558,20095,21456,24290,24582,25702,33349,36957,37836,38027,48021,49426,52277,61255,63019,66174,69199,71182,75613,89178,96744,102126,104596,106250,107420,
#Partially deleted in new
chr9	131126079	131129311	chr9:131126079-131129311	0	+	131128360	131129311	789624	5	115,49,196,152,33,	0,332,1444,2252,3199,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	131126989	131127091	chr9:131126989-131127091	3	+	131126989	131126989	8553170	1	102,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	131128527	131130836	chr9:131128527-131130836	0	+	131128527	131128527	8553170	3	281,199,71,	0,751,2238,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	131132645	131135266	chr9:131132645-131135266	0	+	131132645	131132645	8553170	3	14,104,369,	0,460,2252,
#Partially deleted in new
chr9	131132851	131167505	chr9:131132851-131167505	3	-	131132851	131132851	8553170	3	364,102,428,	0,26510,34226,
#Partially deleted in new
chr9	131132971	131167505	chr9:131132971-131167505	1	-	131132971	131132971	8553170	4	244,101,102,428,	0,3750,26390,34106,
#Partially deleted in new
chr9	131133007	131167505	chr9:131133007-131167505	1	-	131133007	131133007	8553170	4	208,193,102,428,	0,20145,26354,34070,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	131133008	131167505	chr9:131133008-131167505	1	-	131133008	131133008	8553170	4	207,89,102,428,	0,8669,26353,34069,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	131133044	131167505	chr9:131133044-131167505	1	-	131133044	131133044	8553170	5	171,101,89,102,428,	0,3677,8633,26317,34033,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	131133103	131167314	chr9:131133103-131167314	0	-	131133103	131133103	8553170	5	112,89,89,102,237,	0,523,8574,26258,33974,
#Partially deleted in new
chr9	131133196	131139349	chr9:131133196-131139349	0	+	131133196	131133196	8553170	3	13,107,69,	0,1701,6084,
#Partially deleted in new
chr9	131135987	131146193	chr9:131135987-131146193	0	+	131135987	131146193	789624	5	19,127,162,187,65,	0,3293,4561,8580,10141,
#Partially deleted in new
chr9	131136468	131167505	chr9:131136468-131167505	1	-	131136468	131136468	8553170	3	354,102,428,	0,22893,30609,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	131136564	131167505	chr9:131136564-131167505	1	-	131136564	131136564	8553170	4	258,89,102,428,	0,5113,22797,30513,
#Partially deleted in new
chr9	131144701	131195658	chr9:131144701-131195658	0	+	131144701	131144701	8553170	16	53,176,87,150,159,104,183,86,84,264,162,100,76,79,85,426,	0,1427,5622,5914,7034,14681,18289,19168,19359,29353,30758,33609,42587,44351,47506,50531,
#Partially deleted in new
chr9	131149950	131151884	chr9:131149950-131151884	0	+	131149950	131149950	8553170	4	150,87,150,149,	0,373,665,1785,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	131159002	131167408	chr9:131159002-131167408	1	-	131159002	131159002	8553170	2	461,331,	0,8075,
#Partially deleted in new
chr9	131159377	131167465	chr9:131159377-131167465	0	-	131159377	131159377	8553170	3	86,51,388,	0,3905,7700,
#Partially deleted in new
chr9	131162845	131167325	chr9:131162845-131167325	0	-	131162845	131162845	8553170	2	488,248,	0,4232,
#Deleted in new
chr9	131163099	131164549	chr9:131163099-131164549	0	+	131163099	131163099	8553170	3	74,86,489,	0,770,961,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	131163273	131167320	chr9:131163273-131167320	0	-	131163273	131163273	8553170	3	60,348,243,	0,1085,3804,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	131164250	131167325	chr9:131164250-131167325	0	-	131164250	131164250	8553170	3	456,106,248,	0,914,2827,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	131164359	131167325	chr9:131164359-131167325	0	-	131164359	131164359	8553170	2	347,248,	0,2718,
#Partially deleted in new
chr9	131174167	131192292	chr9:131174167-131192292	0	+	131174167	131189062	789624	5	151,162,100,79,85,	0,1292,4143,14885,18040,
#Partially deleted in new
chr9	131175719	131197330	chr9:131175719-131197330	0	+	131175719	131175719	8553170	7	76,100,76,79,85,62,115,	0,2591,11569,13333,16488,19513,21496,
#Partially deleted in new
chr9	131187113	131195341	chr9:131187113-131195341	0	+	131187113	131187113	8553170	4	251,79,85,109,	0,1939,5094,8119,
#Partially deleted in new
chr9	131187311	131233701	chr9:131187311-131233701	0	+	131187311	131230737	789624	13	53,79,85,62,1800,71,157,153,172,163,140,25,248,	0,1741,4896,7921,9904,14335,27900,35466,40848,42351,43318,44972,46142,
#Partially deleted in new
chr9	131187357	131197687	chr9:131187357-131197687	0	+	131187357	131187357	8553170	4	7,79,62,472,	0,1695,7875,9858,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	131189909	131194205	chr9:131189909-131194205	3	-	131189909	131189909	8553170	2	2778,306,	0,3990,
#Partially deleted in new
chr9	131190120	131233703	chr9:131190120-131233703	1	+	131190428	131233487	789624	11	360,85,62,1800,71,157,153,172,140,25,250,	0,2087,5112,7095,11526,25091,32657,38039,40509,42163,43333,
#Partially deleted in new
chr9	131190125	131197843	chr9:131190125-131197843	0	+	131190125	131190125	8553170	3	355,85,628,	0,2082,7090,
#Partially deleted in new
chr9	131190138	131198648	chr9:131190138-131198648	0	+	131190428	131198648	789624	2	342,1433,	0,7077,
#Partially deleted in new
chr9	131190142	131197613	chr9:131190142-131197613	0	+	131190142	131190142	8553170	4	30,85,62,398,	0,2065,5090,7073,
#Partially deleted in new
chr9	131192123	131197886	chr9:131192123-131197886	0	+	131192123	131192123	8553170	2	169,671,	0,5092,
#Deleted in new
chr9	131197337	131198332	chr9:131197337-131198332	0	+	131197337	131197337	8553170	2	79,414,	0,581,
#Partially deleted in new
chr9	131222497	131228228	chr9:131222497-131228228	0	+	131222497	131222497	8553170	2	433,69,	0,5662,
#Partially deleted in new
chr9	131228174	131232469	chr9:131228174-131232469	0	+	131228174	131232328	789624	3	157,140,186,	0,2455,4109,
#Partially deleted in new
chr9	131228223	131233707	chr9:131228223-131233707	0	+	131228223	131233641	789624	3	108,140,254,	0,2406,5230,
#Partially deleted in new
chr9	131228293	131233704	chr9:131228293-131233704	0	+	131228293	131233487	789624	5	38,140,25,48,142,	0,2336,3990,5160,5269,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	131228517	131233008	chr9:131228517-131233008	0	+	131228517	131228517	8553170	2	2252,725,	0,3766,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	131240686	131241724	chr9:131240686-131241724	7	+	131240686	131240686	16724991	2	242,317,	0,721,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	131258075	131264715	chr9:131258075-131264715	0	-	131258075	131258075	8553170	3	3275,47,1238,	0,4615,5402,
#Partially deleted in new
chr9	131258075	131276547	chr9:131258075-131276547	3	-	131260821	131276179	789624	2	3275,691,	0,17781,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	131289458	131359022	chr9:131289458-131359022	0	+	131289997	131346872	789624	5	990,188,968,270,259,	0,35993,57330,59142,69305,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	131289693	131309262	chr9:131289693-131309262	3	+	131289997	131308287	789624	2	755,1340,	0,18229,
#Deleted in new
chr9	131289811	131291445	chr9:131289811-131291445	1	+	131289997	131291115	789624	2	637,335,	0,1299,
#Partially deleted in new
chr9	131370932	131372514	chr9:131370932-131372514	7	+	131370932	131370932	16724991	2	42,611,	0,971,
#Partially deleted in new
chr9	131373635	131430259	chr9:131373635-131430259	0	+	131430144	131430259	789624	2	96,170,	0,56454,
#Partially deleted in new
chr9	131394092	131500197	chr9:131394092-131500197	3	+	131430144	131495874	789624	31	171,170,178,103,73,144,242,122,143,91,193,316,191,196,217,206,146,142,83,192,198,87,105,193,98,128,241,156,92,82,4458,	0,35997,38524,42527,44896,50092,52308,52992,53569,60983,65071,70670,73470,76695,79415,83651,84381,85159,87633,88278,88617,89266,90593,90855,91992,93074,93763,97332,98076,100312,101647,
#Partially deleted in new
chr9	131394212	131447207	chr9:131394212-131447207	1	+	131430144	131447207	789624	8	51,170,178,103,73,144,242,123,	0,35877,38404,42407,44776,49972,52188,52872,
#Partially deleted in new
chr9	131430089	131500171	chr9:131430089-131500171	1	+	131430144	131495874	789624	31	170,178,103,73,144,242,122,143,91,193,316,191,196,217,2082,206,146,142,83,192,198,87,105,193,98,128,241,156,92,82,4432,	0,2527,6530,8899,14095,16311,16995,17572,24986,29074,34673,37473,40698,43418,44364,47654,48384,49162,51636,52281,52620,53269,54596,54858,55995,57077,57766,61335,62079,64315,65650,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	131446504	131448198	chr9:131446504-131448198	0	+	131446504	131446504	8553170	3	138,122,537,	0,580,1157,
#Partially deleted in new
chr9	131455142	131470791	chr9:131455142-131470791	0	+	131455142	131470791	789624	4	24,316,191,4,	0,9620,12420,15645,
#Deleted in new
chr9	131473593	131474847	chr9:131473593-131474847	0	+	131473593	131474847	789624	2	131,394,	0,860,
#Partially deleted in new
chr9	131475929	131484790	chr9:131475929-131484790	0	+	131475929	131484790	789624	9	606,206,146,142,83,189,198,87,105,	0,1814,2544,3322,5796,6444,6780,7429,8756,
#Partially deleted in new
chr9	131485091	131495874	chr9:131485091-131495874	1	+	131485091	131495782	789624	7	49,98,128,241,156,92,135,	0,993,2075,2764,6333,7077,10648,
#Deleted in new
chr9	131485664	131485750	chr9:131485664-131485750	3	+	131485664	131485664	789624	1	86,	0,
#Partially deleted in new
chr9	131487291	131500197	chr9:131487291-131500197	0	+	131487291	131495782	789624	5	3,241,156,92,4458,	0,564,4133,4877,8448,
#Deleted in new
chr9	131490485	131490571	chr9:131490485-131490571	3	+	131490485	131490485	789624	1	86,	0,
#Partially deleted in new
chr9	131490764	131500197	chr9:131490764-131500197	0	+	131490764	131490764	8553170	3	816,92,4458,	0,1404,4975,
#Deleted in new
chr9	131497478	131500191	chr9:131497478-131500191	0	-	131497478	131497478	8553170	1	2713,	0,
#Deleted in new
chr9	131498804	131500171	chr9:131498804-131500171	7	-	131498804	131498804	16724991	3	751,390,219,	0,756,1148,
#Partially deleted in new
chr9	131502901	131523806	chr9:131502901-131523806	1	+	131507438	131523106	789624	18	172,51,147,112,66,94,156,131,96,93,97,93,121,98,114,127,178,875,	0,3501,4466,6009,6841,7001,7358,8435,9139,10337,12524,15543,15935,16487,17178,18444,19145,20030,
#Partially deleted in new
chr9	131502901	131523806	chr9:131502901-131523806	3	+	131504218	131523106	789624	20	412,152,107,51,147,112,66,94,156,131,96,93,97,93,121,98,114,127,178,875,	0,1287,3212,3501,4466,6009,6841,7001,7358,8435,9139,10337,12524,15543,15935,16487,17178,18444,19145,20030,
#Partially deleted in new
chr9	131502917	131523806	chr9:131502917-131523806	1	+	131506153	131523106	789624	19	156,107,51,147,112,66,94,156,131,96,93,97,93,121,98,114,127,178,875,	0,3196,3485,4450,5993,6825,6985,7342,8419,9123,10321,12508,15527,15919,16471,17162,18428,19129,20014,
#Partially deleted in new
chr9	131502917	131513331	chr9:131502917-131513331	0	+	131507438	131513331	789624	10	156,51,147,112,66,160,156,131,96,93,	0,3485,4450,5993,6825,6985,7342,8419,9123,10321,
#Partially deleted in new
chr9	131502924	131523806	chr9:131502924-131523806	1	+	131504218	131523106	789624	20	149,152,107,51,147,112,66,160,156,131,96,93,97,93,121,98,114,127,178,875,	0,1264,3189,3478,4443,5986,6818,6978,7335,8412,9116,10314,12501,15520,15912,16464,17155,18421,19122,20007,
#Partially deleted in new
chr9	131502943	131523806	chr9:131502943-131523806	1	+	131504218	131523106	789624	20	130,152,107,51,147,112,66,94,156,131,96,93,97,93,121,98,114,127,178,875,	0,1245,3170,3459,4424,5967,6799,6959,7316,8393,9097,10295,12482,15501,15893,16445,17136,18402,19103,19988,
#Partially deleted in new
chr9	131502958	131507514	chr9:131502958-131507514	0	+	131504218	131507514	789624	5	355,152,107,51,147,	0,1230,3155,3444,4409,
#Partially deleted in new
chr9	131502970	131512127	chr9:131502970-131512127	0	+	131507438	131512127	789624	8	103,152,51,147,112,59,136,87,	0,1218,3432,4397,5940,7386,8366,9070,
#Partially deleted in new
chr9	131502977	131510311	chr9:131502977-131510311	0	+	131506153	131510311	789624	8	96,107,51,147,112,66,160,52,	0,3136,3425,4390,5933,6765,6925,7282,
#Partially deleted in new
chr9	131502983	131506773	chr9:131502983-131506773	0	+	131502983	131502983	8553170	3	90,107,371,	0,3130,3419,
#Partially deleted in new
chr9	131503008	131510415	chr9:131503008-131510415	0	+	131507438	131510415	789624	7	65,51,147,112,66,94,156,	0,3394,4359,5902,6734,6894,7251,
#Partially deleted in new
chr9	131508925	131513331	chr9:131508925-131513331	0	+	131508925	131508925	8553170	6	97,66,513,136,96,93,	0,817,977,2411,3115,4313,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	131510499	131523798	chr9:131510499-131523798	0	+	131510499	131510499	8553170	10	1637,93,97,93,121,93,114,127,178,867,	0,2739,4926,7945,8337,8894,9580,10846,11547,12432,
#Partially deleted in new
chr9	131516557	131522229	chr9:131516557-131522229	3	-	131516557	131516557	8553170	2	411,62,	0,5610,
#Partially deleted in new
chr9	131518218	131523806	chr9:131518218-131523806	0	+	131518218	131523106	789624	8	135,93,121,98,114,127,178,875,	0,226,618,1170,1861,3127,3828,4713,
#Partially deleted in new
chr9	131518767	131521404	chr9:131518767-131521404	0	+	131518767	131518767	8553170	4	190,98,114,59,	0,621,1312,2578,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	131521104	131522533	chr9:131521104-131522533	0	+	131521104	131521104	8553170	2	368,487,	0,942,
#Partially deleted in new
chr9	131523800	131531259	chr9:131523800-131531259	1	-	131525172	131531174	0	6	1421,49,143,97,160,193,	0,2128,5327,5687,6685,7266,
#Partially deleted in new
chr9	131523800	131531179	chr9:131523800-131531179	1	-	131525039	131531174	0	7	1421,49,95,143,97,160,86,	0,2128,5143,5327,5687,6685,7293,
#Partially deleted in new
chr9	131523800	131531200	chr9:131523800-131531200	1	-	131525039	131531174	0	7	1421,49,95,143,97,202,107,	0,2128,5143,5327,5687,6685,7293,
#Partially deleted in new
chr9	131523800	131531268	chr9:131523800-131531268	3	-	131525039	131531174	0	7	1421,49,95,143,97,160,202,	0,2128,5143,5327,5687,6685,7266,
#Partially deleted in new
chr9	131523800	131531237	chr9:131523800-131531237	0	-	131526491	131531174	789624	8	1421,49,59,95,143,97,202,171,	0,2128,2644,5143,5327,5687,6685,7266,
#Partially deleted in new
chr9	131524737	131526159	chr9:131524737-131526159	0	-	131524737	131524737	8553170	2	484,231,	0,1191,
#Partially deleted in new
chr9	131525147	131531264	chr9:131525147-131531264	0	-	131525147	131525147	8553170	7	74,49,95,143,69,160,198,	0,781,3796,3980,4340,5338,5919,
#Partially deleted in new
chr9	131525944	131531244	chr9:131525944-131531244	0	-	131525944	131525944	8553170	5	33,327,97,160,178,	0,2999,3543,4541,5122,
#Deleted in new
chr9	131528794	131529157	chr9:131528794-131529157	0	-	131528794	131528794	8553170	2	244,30,	0,333,
#Partially deleted in new
chr9	131545513	131558620	chr9:131545513-131558620	3	+	131545615	131558202	789624	4	127,473,144,568,	0,9043,10556,12539,
#Partially deleted in new
chr9	131576769	131737538	chr9:131576769-131737538	1	-	131579496	131737414	0	24	2878,129,98,102,79,95,85,186,93,85,76,112,89,203,501,184,124,153,89,157,179,114,140,134,	0,3493,5835,7541,7748,10966,11172,12031,13116,15329,19528,21429,25291,45026,49152,51143,51779,52332,53466,61865,66469,73359,74040,160635,
#Partially deleted in new
chr9	131576769	131740074	chr9:131576769-131740074	1	-	131579496	131739830	0	24	2878,129,98,102,79,95,85,186,93,85,76,112,89,203,501,184,124,153,89,157,179,114,140,305,	0,3493,5835,7541,7748,10966,11172,12031,13116,15329,19528,21429,25291,45026,49152,51143,51779,52332,53466,61865,66469,73359,74040,163000,
#Partially deleted in new
chr9	131576777	131709721	chr9:131576777-131709721	3	-	131579496	131709683	0	24	2870,129,98,102,79,95,85,186,93,85,76,112,89,203,501,184,124,153,89,157,179,114,140,102,	0,3485,5827,7533,7740,10958,11164,12023,13108,15321,19520,21421,25283,45018,49144,51135,51771,52324,53458,61857,66461,73351,74032,132842,
#Partially deleted in new
chr9	131587735	131621838	chr9:131587735-131621838	0	-	131587735	131621838	789624	10	95,85,186,93,85,76,112,89,93,43,	0,206,1065,2150,4363,8562,10463,14325,16225,34060,
#Partially deleted in new
chr9	131602113	131625948	chr9:131602113-131625948	0	-	131602113	131625948	789624	5	36,258,159,203,27,	0,2817,16937,19682,23808,
#Partially deleted in new
chr9	131626159	131643391	chr9:131626159-131643391	0	-	131626159	131626159	8553170	6	263,184,124,153,157,153,	0,1753,2389,2942,12475,17079,
#Partially deleted in new
chr9	131638697	131739944	chr9:131638697-131739944	0	-	131638697	131739830	789624	4	94,179,140,175,	0,4541,12112,101072,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	131725167	131725467	chr9:131725167-131725467	3	-	131725167	131725167	8553170	1	300,	0,
#Deleted in new
chr9	131782569	131782813	chr9:131782569-131782813	7	-	131782569	131782569	16724991	1	244,	0,
#Deleted in new
chr9	131782859	131782958	chr9:131782859-131782958	3	-	131782859	131782859	8553170	1	99,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	131816191	131820988	chr9:131816191-131820988	3	+	131816191	131816191	8553170	3	196,286,347,	0,3659,4450,
#Partially deleted in new
chr9	131860106	132079908	chr9:131860106-132079908	3	-	131860537	132079844	789624	8	566,78,42,108,94,131,145,267,	0,2956,23951,33778,79274,154230,217335,219535,
#Partially deleted in new
chr9	131860106	132079866	chr9:131860106-132079866	1	-	131860537	132079844	789624	7	566,78,42,94,131,145,225,	0,2956,23951,79274,154230,217335,219535,
#Partially deleted in new
chr9	132031885	132079645	chr9:132031885-132079645	0	-	132031885	132031885	8553170	3	284,145,4,	0,45556,47756,
#Deleted in new
chr9	132073350	132079866	chr9:132073350-132079866	1	-	132073697	132079844	789624	3	392,145,225,	0,4091,6291,
#Partially deleted in new
chr9	132161675	132233890	chr9:132161675-132233890	1	+	132166831	132231509	0	7	44,47,456,644,173,24,2596,	0,4353,4913,36290,65173,68896,69619,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	132161946	132244534	chr9:132161946-132244534	3	+	132166831	132242111	0	8	293,696,644,173,24,168,135,2659,	0,4402,36019,64902,68625,77157,78963,79929,
#Deleted in new
chr9	132240607	132242173	chr9:132240607-132242173	0	+	132240607	132240607	8553170	2	437,298,	0,1268,
#Deleted in new
chr9	132241440	132242169	chr9:132241440-132242169	0	+	132241440	132241440	8553170	2	64,294,	0,435,
#Partially deleted in new
chr9	132261355	132354985	chr9:132261355-132354985	3	-	132264238	132349428	789624	26	3630,88,99,165,93,188,108,150,72,116,102,157,168,233,174,100,4176,88,172,120,220,110,211,184,107,69,	0,8259,10354,13900,15704,16714,20111,21908,25067,26880,27194,34516,35531,36724,39274,50401,64968,69696,69921,73252,74940,81334,84905,87896,92293,93561,
#Partially deleted in new
chr9	132261355	132311856	chr9:132261355-132311856	0	-	132264238	132311856	789624	17	3630,87,88,99,165,93,188,108,150,72,116,102,157,168,233,174,100,	0,8047,8259,10354,13900,15704,16714,20111,21908,25067,26880,27194,34516,35531,36724,39274,50401,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	132261355	132275382	chr9:132261355-132275382	0	-	132261355	132261355	8553170	5	3630,123,88,99,127,	0,4771,8259,10354,13900,
#Partially deleted in new
chr9	132274922	132278109	chr9:132274922-132278109	0	-	132274922	132274922	8553170	3	498,93,40,	0,2137,3147,
#Partially deleted in new
chr9	132282769	132286497	chr9:132282769-132286497	0	-	132282769	132282769	8553170	2	644,75,	0,3653,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	132375547	132406851	chr9:132375547-132406851	1	-	132375914	132400080	789624	10	621,86,66,90,235,131,79,186,224,62,	0,3511,11008,12591,15049,16528,20885,22593,24487,31242,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	132375620	132406822	chr9:132375620-132406822	3	-	132375914	132402821	789624	11	548,86,66,90,235,131,79,186,224,1374,33,	0,3438,10935,12518,14976,16455,20812,22520,24414,25834,31169,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	132375734	132379205	chr9:132375734-132379205	0	-	132375734	132375734	8553170	2	434,147,	0,3324,
#Partially deleted in new
chr9	132410042	132513406	chr9:132410042-132513406	1	+	132410271	132513331	789624	4	424,100,229,148,	0,88652,89329,103216,
#Partially deleted in new
chr9	132410223	132573317	chr9:132410223-132573317	1	+	132410271	132572510	789624	7	243,108,100,229,106,102,930,	0,72086,88471,89148,127377,132722,162164,
#Partially deleted in new
chr9	132410227	132573249	chr9:132410227-132573249	3	+	132410271	132572510	789624	6	239,100,229,106,102,862,	0,88467,89144,127373,132718,162160,
#Deleted in new
chr9	132582184	132590266	chr9:132582184-132590266	3	+	132582797	132589522	789624	3	1079,223,1039,	0,5144,7043,
#Deleted in new
chr9	132582658	132589683	chr9:132582658-132589683	1	+	132582797	132589522	789624	4	19,499,223,456,	0,106,4670,6569,
#Partially deleted in new
chr9	132592996	132612313	chr9:132592996-132612313	0	-	132592996	132592996	8553170	2	2116,227,	0,19090,
#Partially deleted in new
chr9	132592996	132670401	chr9:132592996-132670401	3	-	132594865	132670249	789624	20	2116,169,112,82,140,51,60,177,236,107,120,65,42,45,65,71,44,76,257,542,	0,19090,25333,32667,37267,39044,49007,52898,53826,55192,55435,57237,58078,59451,65674,66713,68211,69264,69442,76863,
#Partially deleted in new
chr9	132594288	132670401	chr9:132594288-132670401	1	-	132594865	132670249	789624	20	824,169,112,82,140,51,60,177,236,107,120,65,42,45,65,71,44,76,257,542,	0,17798,24041,31375,35975,37752,47715,51606,52534,53900,54143,55945,56786,58159,64382,65421,66919,67972,68150,75571,
#Partially deleted in new
chr9	132594385	132670027	chr9:132594385-132670027	1	-	132594865	132669934	789624	20	727,169,112,82,140,51,60,177,236,107,120,65,42,45,65,71,44,76,257,168,	0,17701,23944,31278,35878,37655,47618,51509,52437,53803,54046,55848,56689,58062,64285,65324,66822,67875,68053,75474,
#Partially deleted in new
chr9	132637862	132670401	chr9:132637862-132670401	1	-	132638360	132670249	789624	15	501,60,177,236,107,120,65,42,45,65,71,44,76,257,542,	0,4141,8032,8960,10326,10569,12371,13212,14585,20808,21847,23345,24398,24576,31997,
#Partially deleted in new
chr9	132658080	132670401	chr9:132658080-132670401	1	-	132658301	132670249	789624	7	278,65,71,44,76,257,542,	0,590,1629,3127,4180,4358,11779,
#Partially deleted in new
chr9	132661075	132670401	chr9:132661075-132670401	0	-	132661075	132661075	8553170	4	176,76,257,542,	0,1185,1363,8784,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	132670034	132694955	chr9:132670034-132694955	3	+	132670598	132688945	789624	5	921,1827,131,89,6075,	0,7942,13528,17204,18846,
#Partially deleted in new
chr9	132670034	132679310	chr9:132670034-132679310	1	+	132670598	132678907	789624	3	921,63,433,	0,7942,8843,
#Partially deleted in new
chr9	132725577	132878777	chr9:132725577-132878777	1	-	132725687	132878255	789624	13	348,81,142,90,132,201,72,82,69,114,50,85,606,	0,1876,67056,89060,97627,101276,102435,103067,129279,138087,141326,149537,152594,
#Partially deleted in new
chr9	132725577	132878777	chr9:132725577-132878777	0	-	132725577	132725577	8553170	12	348,81,142,90,132,201,72,82,69,114,50,606,	0,1876,67056,89060,97627,101276,102435,103067,129279,138087,141326,152594,
#Partially deleted in new
chr9	132725577	132878777	chr9:132725577-132878777	2	-	132725577	132725577	8553170	15	348,81,142,90,132,201,129,236,82,69,114,50,100,85,606,	0,1876,67056,89060,97627,101276,101729,102271,103067,129279,138087,141326,148762,149537,152594,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	132725582	132727598	chr9:132725582-132727598	0	-	132725582	132725582	8553170	2	343,145,	0,1871,
#Deleted in new
chr9	132768964	132770212	chr9:132768964-132770212	3	-	132768964	132768964	8553170	2	788,231,	0,1017,
#Partially deleted in new
chr9	132861395	132863712	chr9:132861395-132863712	0	-	132861395	132861395	8553170	2	202,48,	0,2269,
#Duplicated in new
chr9	132878026	132890031	chr9:132878026-132890031	1	+	132883947	132888611	789624	4	410,181,203,1742,	0,5884,9342,10263,
#Partially deleted in new
chr9	132878897	132890201	chr9:132878897-132890201	3	+	132883947	132889968	789624	5	117,181,203,148,245,	0,5013,8471,9392,11059,
#Duplicated in new
chr9	132878897	132890031	chr9:132878897-132890031	1	+	132883947	132888611	789624	4	117,181,203,1742,	0,5013,8471,9392,
#Partially deleted in new
chr9	132891347	132944633	chr9:132891347-132944633	3	-	132896234	132928872	0	23	5407,162,188,123,111,183,167,44,559,105,70,122,112,116,176,74,155,145,153,104,186,63,91,	0,5836,6075,9367,10241,11257,12303,13063,14233,15383,15953,19223,19654,20105,20934,30015,30471,32000,34239,35853,37419,43685,53195,
#Partially deleted in new
chr9	132891347	132905621	chr9:132891347-132905621	0	-	132902737	132905621	789624	8	5407,162,188,123,111,183,44,41,	0,5836,6075,9367,10241,11257,13063,14233,
#Partially deleted in new
chr9	132891349	132928955	chr9:132891349-132928955	1	-	132896234	132928872	0	21	5405,162,188,123,111,183,167,44,559,105,70,122,112,116,176,74,155,145,153,104,189,	0,5834,6073,9365,10239,11255,12301,13061,14231,15381,15951,19221,19652,20103,20932,30013,30469,31998,34237,35851,37417,
#Partially deleted in new
chr9	132891349	132928955	chr9:132891349-132928955	1	-	132896234	132928872	0	20	5405,162,188,123,111,183,167,44,559,105,70,122,112,116,176,74,155,145,104,189,	0,5834,6073,9365,10239,11255,12301,13061,14231,15381,15951,19221,19652,20103,20932,30013,30469,31998,35851,37417,
#Partially deleted in new
chr9	132891352	132944619	chr9:132891352-132944619	1	-	132896234	132928872	789624	23	5402,162,188,123,111,183,152,44,559,105,70,119,112,116,176,74,155,145,153,104,186,63,77,	0,5831,6070,9362,10236,11252,12298,13058,14228,15378,15948,19218,19649,20100,20929,30010,30466,31995,34234,35848,37414,43680,53190,
#Partially deleted in new
chr9	132891352	132944769	chr9:132891352-132944769	1	-	132896234	132928872	789624	23	5402,162,188,123,111,183,167,44,559,105,70,119,112,116,176,74,155,145,153,104,186,63,198,	0,5831,6070,9362,10236,11252,12298,13058,14228,15378,15948,19218,19649,20100,20929,30010,30466,31995,34234,35848,37414,43680,53219,
#Partially deleted in new
chr9	132891352	132907370	chr9:132891352-132907370	0	-	132896234	132907370	789624	11	5402,162,188,123,69,183,167,44,559,105,70,	0,5831,6070,9362,10278,11252,12298,13058,14228,15378,15948,
#Partially deleted in new
chr9	132891352	132944633	chr9:132891352-132944633	1	-	132896234	132928872	0	23	5402,162,188,123,111,183,167,44,559,105,70,122,112,116,176,74,155,145,153,104,186,63,62,	0,5831,6070,9362,10236,11252,12298,13058,14228,15378,15948,19218,19649,20100,20929,30010,30466,31995,34234,35848,37414,43680,53219,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	132891374	132906532	chr9:132891374-132906532	0	-	132891374	132891374	8553170	9	5380,162,183,123,69,183,167,44,952,	0,5809,6053,9340,10256,11230,12276,13036,14206,
#Partially deleted in new
chr9	132891389	132911206	chr9:132891389-132911206	0	-	132891389	132891389	8553170	13	5365,162,188,123,111,183,167,44,559,105,70,122,205,	0,5794,6033,9325,10199,11215,12261,13021,14191,15341,15911,19181,19612,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	132891391	132901958	chr9:132891391-132901958	0	-	132891391	132891391	8553170	6	5363,162,188,123,111,50,	0,5792,6031,9323,10197,10517,
#Partially deleted in new
chr9	132893352	132944617	chr9:132893352-132944617	1	-	132896234	132928872	0	23	3402,162,188,123,111,183,167,44,559,105,70,122,112,116,176,74,155,145,153,104,186,63,71,	0,3831,4070,7362,8236,9252,10298,11058,12228,13378,13948,17218,17649,18100,18929,28010,28466,29995,32234,33848,35414,41680,51194,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	132894777	132906542	chr9:132894777-132906542	0	-	132894777	132894777	8553170	9	1977,162,188,123,111,183,167,44,962,	0,2406,2645,5937,6811,7827,8873,9633,10803,
#Partially deleted in new
chr9	132894848	132944631	chr9:132894848-132944631	0	-	132894848	132894848	8553170	21	1906,162,188,123,111,183,167,44,559,105,70,998,176,74,155,145,153,104,186,63,60,	0,2335,2574,5866,6740,7756,8802,9562,10732,11882,12452,15722,17433,26514,26970,28499,30738,32352,33918,40184,49723,
#Partially deleted in new
chr9	132895077	132944619	chr9:132895077-132944619	0	-	132925719	132928872	789624	22	1677,162,188,123,111,183,167,44,559,105,70,122,112,116,176,74,155,145,153,186,63,48,	0,2106,2345,5637,6511,7527,8573,9333,10503,11653,12223,15493,15924,16375,17204,26285,26741,28270,30509,33689,39955,49494,
#Partially deleted in new
chr9	132895911	132944623	chr9:132895911-132944623	1	-	132896234	132928872	789624	23	843,162,188,123,111,183,167,44,559,105,70,119,112,116,176,74,155,145,153,104,186,63,81,	0,1272,1511,4803,5677,6693,7739,8499,9669,10819,11389,14659,15090,15541,16370,25451,25907,27436,29675,31289,32855,39121,48631,
#Partially deleted in new
chr9	132895911	132944608	chr9:132895911-132944608	0	-	132912433	132928872	789624	22	843,162,188,123,111,183,167,44,559,105,70,122,112,116,176,155,145,153,104,186,63,66,	0,1272,1511,4803,5677,6693,7739,8499,9669,10819,11389,14659,15090,15541,16370,25907,27436,29675,31289,32855,39121,48631,
#Partially deleted in new
chr9	132895977	132944615	chr9:132895977-132944615	1	-	132896234	132928872	789624	23	777,162,188,123,111,183,152,44,559,105,70,122,112,116,176,74,155,145,153,104,186,63,73,	0,1206,1445,4737,5611,6627,7673,8433,9603,10753,11323,14593,15024,15475,16304,25385,25841,27370,29609,31223,32789,39055,48565,
#Partially deleted in new
chr9	132895998	132912921	chr9:132895998-132912921	0	-	132895998	132895998	8553170	13	756,162,188,123,111,183,167,44,559,105,70,998,640,	0,1185,1424,4716,5590,6606,7652,8412,9582,10732,11302,14572,16283,
#Partially deleted in new
chr9	132896087	132944626	chr9:132896087-132944626	0	-	132925719	132928872	789624	22	667,162,188,123,111,183,167,44,559,105,70,119,112,116,176,74,155,145,153,186,63,84,	0,1096,1335,4627,5501,6517,7563,8323,9493,10643,11213,14483,14914,15365,16194,25275,25731,27260,29499,32679,38945,48455,
#Partially deleted in new
chr9	132896166	132944633	chr9:132896166-132944633	0	-	132925719	132928872	789624	22	588,162,188,123,111,183,167,44,559,105,70,122,112,116,176,74,155,145,153,186,63,91,	0,1017,1256,4548,5422,6438,7484,8244,9414,10564,11134,14404,14835,15286,16115,25196,25652,27181,29420,32600,38866,48376,
#Partially deleted in new
chr9	132896197	132944616	chr9:132896197-132944616	1	-	132896234	132928872	0	22	557,162,188,123,111,183,167,44,559,105,70,122,112,116,176,74,155,145,104,186,63,74,	0,986,1225,4517,5391,6407,7453,8213,9383,10533,11103,14373,14804,15255,16084,25165,25621,27150,31003,32569,38835,48345,
#Partially deleted in new
chr9	132896540	132905641	chr9:132896540-132905641	0	-	132902774	132905641	789624	8	214,427,123,111,179,167,44,61,	0,643,4174,5048,6064,7110,7870,9040,
#Partially deleted in new
chr9	132896541	132906095	chr9:132896541-132906095	0	-	132903798	132906095	789624	8	213,162,188,123,111,183,167,515,	0,642,881,4173,5047,6063,7109,9039,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chr9	132898979	132944627	chr9:132898979-132944627	0	-	132898979	132898979	8553170	18	1858,111,183,167,44,559,105,70,998,176,74,155,145,153,104,186,63,85,	0,2609,3625,4671,5431,6601,7751,8321,11591,13302,22383,22839,24368,26607,28221,29787,36053,45563,
#Partially deleted in new
chr9	132906743	132946874	chr9:132906743-132946874	0	-	132906743	132928872	789624	11	92,70,116,176,74,155,145,104,186,63,116,	0,557,4709,5538,14619,15075,16604,20457,22023,28289,40015,
#Partially deleted in new
chr9	132906750	132944572	chr9:132906750-132944572	0	-	132924918	132928872	789624	15	85,70,122,112,116,176,74,155,145,125,153,104,186,63,30,	0,550,3820,4251,4702,5531,14612,15068,16597,18064,18836,20450,22016,28282,37792,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	132909751	132944616	chr9:132909751-132944616	1	-	132910468	132928872	789624	12	941,112,116,176,74,155,145,153,104,186,63,74,	0,1250,1701,2530,11611,12067,13596,15835,17449,19015,25281,34791,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	132909806	132912468	chr9:132909806-132912468	0	-	132909806	132909806	8553170	4	883,112,116,187,	0,1195,1646,2475,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chr9	132909806	132944627	chr9:132909806-132944627	1	-	132910468	132928872	789624	14	886,112,116,176,74,155,145,153,104,186,219,75,63,85,	0,1195,1646,2475,11556,12012,13541,15780,17394,18960,21402,24659,25226,34736,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	132909806	132944633	chr9:132909806-132944633	1	-	132910468	132928872	789624	12	886,112,116,176,74,155,145,153,104,186,63,62,	0,1195,1646,2475,11556,12012,13541,15780,17394,18960,25226,34765,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	132910260	132935090	chr9:132910260-132935090	1	-	132911039	132928872	789624	11	429,112,159,176,74,155,145,153,104,186,58,	0,741,1149,2021,11102,11558,13087,15326,16940,18506,24772,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chr9	132910260	132944616	chr9:132910260-132944616	1	-	132910468	132928872	789624	12	429,112,116,176,74,155,145,153,104,186,63,74,	0,741,1192,2021,11102,11558,13087,15326,16940,18506,24772,34282,
#Partially deleted in new
chr9	132910570	132944572	chr9:132910570-132944572	0	-	132924834	132928872	789624	13	119,112,116,176,74,155,145,92,153,104,186,63,30,	0,431,882,1711,10792,11248,12777,14244,15016,16630,18196,24462,33972,
#Partially deleted in new
chr9	132910636	132944633	chr9:132910636-132944633	0	-	132910636	132928872	789624	11	53,112,116,176,74,155,145,104,186,63,62,	0,365,816,1645,10726,11182,12711,16564,18130,24396,33935,
#Partially deleted in new
chr9	132910998	132944633	chr9:132910998-132944633	1	-	132911380	132928872	789624	10	570,176,74,155,145,153,104,186,63,91,	0,1283,10364,10820,12349,14588,16202,17768,24034,33544,
#Partially deleted in new
chr9	132911290	132944694	chr9:132911290-132944694	0	-	132924962	132928872	789624	11	278,176,74,155,145,193,153,104,186,63,123,	0,991,10072,10528,12057,13524,14296,15910,17476,23742,33281,
#Partially deleted in new
chr9	132911507	132944633	chr9:132911507-132944633	0	-	132911507	132923492	789624	8	61,176,74,155,145,153,63,62,	0,774,9855,10311,11840,14079,23525,33064,
#Partially deleted in new
chr9	132921425	132944619	chr9:132921425-132944619	0	-	132921425	132928872	789624	7	11,155,145,153,104,186,77,	0,393,1922,4161,5775,7341,23117,
#Deleted in new
chr9	132921818	132923684	chr9:132921818-132923684	0	-	132921818	132921818	8553170	2	155,337,	0,1529,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	132921940	132944616	chr9:132921940-132944616	0	-	132921940	132921940	8553170	6	33,145,1718,186,63,74,	0,1407,3646,6826,13092,22602,
#Partially deleted in new
chr9	132923479	132944612	chr9:132923479-132944612	0	-	132923479	132928872	789624	7	13,153,104,186,96,63,70,	0,2107,3721,5287,7729,11553,21063,
#Partially deleted in new
chr9	132925734	132945375	chr9:132925734-132945375	0	-	132925734	132928872	789624	5	5,104,186,63,191,	0,1466,3032,9298,19450,
#Partially deleted in new
chr9	132939070	132944834	chr9:132939070-132944834	0	-	132939070	132939070	8553170	2	206,288,	0,5476,
#Partially deleted in new
chr9	132939070	132944558	chr9:132939070-132944558	0	-	132939070	132939070	8553170	4	206,73,212,12,	0,2349,3144,5476,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	132940734	132944616	chr9:132940734-132944616	0	-	132940734	132940734	8553170	3	1692,239,74,	0,2733,3808,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	132941395	132944553	chr9:132941395-132944553	0	-	132941395	132941395	8553170	3	1031,187,11,	0,2072,3147,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	132943999	132953763	chr9:132943999-132953763	0	+	132943999	132943999	8553170	4	47,233,186,2555,	0,564,3061,7209,
#Partially deleted in new
chr9	132945532	132947001	chr9:132945532-132947001	0	+	132945532	132945532	8553170	2	66,405,	0,1064,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	132945550	132991687	chr9:132945550-132991687	3	+	132986678	132991050	789624	11	119,22,188,135,335,120,138,272,138,166,816,	0,27174,29466,30910,32956,41108,41731,42646,43510,44191,45321,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	132949689	132951553	chr9:132949689-132951553	0	+	132949689	132949689	8553170	2	115,345,	0,1519,
#Partially deleted in new
chr9	132962510	132962667	chr9:132962510-132962667	7	+	132962510	132962510	16724991	1	157,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	132963731	132963793	chr9:132963731-132963793	3	+	132963731	132963731	8553170	1	62,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	132978650	132991650	chr9:132978650-132991650	1	+	132986678	132991050	789624	7	191,120,138,272,138,232,779,	0,8008,8631,9546,10410,11025,12221,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	132978694	132991687	chr9:132978694-132991687	1	+	132986678	132991050	789624	7	147,120,138,272,138,166,816,	0,7964,8587,9502,10366,11047,12177,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	132978710	132991687	chr9:132978710-132991687	1	+	132986678	132991050	789624	6	131,120,138,272,166,816,	0,7948,8571,9486,11031,12161,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	132986678	132991565	chr9:132986678-132991565	1	+	132986678	132991050	789624	6	100,138,272,138,262,694,	0,603,1518,2382,2967,4193,
#Deleted in new
chr9	133019485	133020874	chr9:133019485-133020874	7	+	133019485	133019485	16724991	1	1389,	0,
#Partially deleted in new
chr9	133030674	133058501	chr9:133030674-133058501	1	+	133031114	133057980	789624	9	490,196,105,115,81,98,83,143,688,	0,20108,21385,23153,23733,24037,25337,26091,27139,
#Partially deleted in new
chr9	133030688	133058503	chr9:133030688-133058503	3	+	133031011	133057980	789624	11	476,220,199,196,105,115,81,98,83,143,690,	0,11398,13039,20094,21371,23139,23719,24023,25323,26077,27125,
#Partially deleted in new
chr9	133030710	133052164	chr9:133030710-133052164	0	+	133030898	133052164	789624	5	200,220,199,196,105,	0,11376,13017,20072,21349,
#Partially deleted in new
chr9	133031003	133058503	chr9:133031003-133058503	1	+	133031011	133057980	789624	11	161,220,199,114,95,81,98,21,83,143,690,	0,11083,12724,19779,22844,23404,23708,23940,25008,25762,26810,
#Partially deleted in new
chr9	133031003	133058501	chr9:133031003-133058501	1	+	133031011	133057980	789624	12	161,220,199,196,105,115,81,98,21,83,143,688,	0,11083,12724,19779,21056,22824,23404,23708,23940,25008,25762,26810,
#Partially deleted in new
chr9	133031016	133054467	chr9:133031016-133054467	0	+	133043729	133054467	789624	6	148,199,196,105,115,60,	0,12711,19766,21043,22811,23391,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	133031017	133044407	chr9:133031017-133044407	0	+	133031017	133031017	8553170	2	147,680,	0,12710,
#Deleted in new
chr9	133051995	133052059	chr9:133051995-133052059	3	+	133051995	133051995	5263520	1	64,	0,
#Partially deleted in new
chr9	133053902	133055347	chr9:133053902-133055347	0	+	133053902	133053902	8553170	4	40,81,98,404,	0,505,809,1041,
#Partially deleted in new
chr9	133053918	133055342	chr9:133053918-133055342	0	+	133053918	133054878	789624	3	24,81,631,	0,489,793,
#Partially deleted in new
chr9	133055858	133058130	chr9:133055858-133058130	0	+	133055858	133055858	8553170	3	236,143,317,	0,907,1955,
#Partially deleted in new
chr9	133061977	133071861	chr9:133061977-133071861	3	+	133061993	133071764	789624	11	91,151,123,198,131,108,118,187,204,198,875,	0,2426,2662,3062,4552,4860,5110,6694,7078,8483,9009,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	133079899	133084525	chr9:133079899-133084525	5	+	133079899	133079899	16724991	3	2237,107,70,	0,2377,4556,
#Partially deleted in new
chr9	133082538	133087355	chr9:133082538-133087355	7	+	133082538	133082538	16724991	5	88,187,204,200,570,	0,1917,2301,3719,4247,
#Partially deleted in new
chr9	133082560	133087253	chr9:133082560-133087253	5	+	133082560	133082560	16724991	5	66,187,204,200,468,	0,1895,2279,3697,4225,
#Partially deleted in new
chr9	133097719	133121176	chr9:133097719-133121176	1	-	133098586	133121154	0	18	1043,115,243,202,96,122,33,87,69,85,104,216,419,194,60,194,111,205,	0,2548,3800,4218,4756,5059,5510,6027,6543,8212,8925,9365,10268,10953,11906,12576,14322,23252,
#Partially deleted in new
chr9	133097719	133121176	chr9:133097719-133121176	3	-	133098586	133121154	0	18	1043,115,243,202,96,122,33,87,69,85,104,216,419,194,96,194,111,205,	0,2548,3800,4218,4756,5059,5510,6027,6543,8212,8925,9365,10268,10953,11906,12576,14322,23252,
#Partially deleted in new
chr9	133097719	133149334	chr9:133097719-133149334	1	-	133098586	133148980	0	18	1043,115,243,202,96,122,33,87,69,85,104,216,419,194,96,194,111,372,	0,2548,3800,4218,4756,5059,5510,6027,6543,8212,8925,9365,10268,10953,11906,12576,14322,51243,
#Partially deleted in new
chr9	133097719	133108838	chr9:133097719-133108838	0	-	133097719	133097719	8553170	11	4420,96,122,33,87,69,85,104,216,419,166,	0,4756,5059,5510,6027,6543,8212,8925,9365,10268,10953,
#Partially deleted in new
chr9	133097719	133108792	chr9:133097719-133108792	0	-	133097719	133097719	8553170	12	4043,202,96,122,33,87,69,85,104,216,419,120,	0,4218,4756,5059,5510,6027,6543,8212,8925,9365,10268,10953,
#Partially deleted in new
chr9	133097719	133121156	chr9:133097719-133121156	0	-	133097719	133097719	8553170	18	1043,115,1267,202,96,122,33,87,69,85,104,216,419,194,60,194,111,185,	0,2548,2776,4218,4756,5059,5510,6027,6543,8212,8925,9365,10268,10953,11906,12576,14322,23252,
#Partially deleted in new
chr9	133097720	133129401	chr9:133097720-133129401	1	-	133098586	133129318	0	18	1042,115,243,202,96,122,33,87,69,85,104,216,419,194,96,194,111,263,	0,2547,3799,4217,4755,5058,5509,6026,6542,8211,8924,9364,10267,10952,11905,12575,14321,31418,
#Partially deleted in new
chr9	133098120	133163914	chr9:133098120-133163914	3	-	133098586	133162412	789624	23	642,115,243,202,96,122,33,87,69,85,104,216,419,194,96,194,111,135,36,88,66,191,161,	0,2147,3399,3817,4355,4658,5109,5626,6142,7811,8524,8964,9867,10552,11505,12175,13921,57057,57780,57894,63346,64221,65633,
#Deleted in new
chr9	133098220	133101914	chr9:133098220-133101914	0	-	133098220	133098220	8553170	3	542,115,395,	0,2047,3299,
#Partially deleted in new
chr9	133098359	133131117	chr9:133098359-133131117	1	-	133098586	133131083	0	18	403,115,243,202,96,122,33,87,69,85,104,216,419,194,60,194,111,166,	0,1908,3160,3578,4116,4419,4870,5387,5903,7572,8285,8725,9628,10313,11266,11936,13682,32592,
#Deleted in new
chr9	133098637	133100545	chr9:133098637-133100545	0	-	133098637	133098637	8553170	2	125,278,	0,1630,
#Deleted in new
chr9	133099970	133101582	chr9:133099970-133101582	0	-	133100157	133101582	789624	2	412,63,	0,1549,
#Partially deleted in new
chr9	133101727	133108080	chr9:133101727-133108080	0	-	133101727	133108080	789624	10	35,202,96,122,33,87,69,85,104,93,	0,210,748,1051,1502,2019,2535,4204,4917,6260,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	133102517	133104602	chr9:133102517-133104602	0	-	133102517	133102517	8553170	5	54,122,33,87,340,	0,261,712,1229,1745,
#Deleted in new
chr9	133103685	133104331	chr9:133103685-133104331	0	-	133103685	133103685	8553170	2	148,69,	0,577,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	133103768	133108018	chr9:133103768-133108018	0	-	133104545	133108018	789624	7	65,69,104,85,104,216,31,	0,494,679,2163,2876,3316,4219,
#Partially deleted in new
chr9	133152947	133163945	chr9:133152947-133163945	3	-	133153576	133162412	789624	7	1314,135,36,51,66,191,192,	0,2230,2953,3067,8519,9394,10806,
#Partially deleted in new
chr9	133152952	133163919	chr9:133152952-133163919	1	-	133153716	133162412	789624	7	1290,135,36,51,66,191,166,	0,2225,2948,3062,8514,9389,10801,
#Partially deleted in new
chr9	133152952	133163919	chr9:133152952-133163919	1	-	133155173	133162412	789624	6	2360,36,51,66,191,166,	0,2948,3062,8514,9389,10801,
#Partially deleted in new
chr9	133152952	133163919	chr9:133152952-133163919	0	-	133152952	133152952	8553170	5	2360,165,66,191,166,	0,2948,8514,9389,10801,
#Partially deleted in new
chr9	133153401	133163914	chr9:133153401-133163914	1	-	133153576	133162412	789624	6	860,135,36,66,191,161,	0,1776,2499,8065,8940,10352,
#Partially deleted in new
chr9	133153426	133163914	chr9:133153426-133163914	1	-	133154174	133162412	789624	7	835,172,36,51,66,191,161,	0,1751,2474,2588,8040,8915,10327,
#Partially deleted in new
chr9	133154074	133163897	chr9:133154074-133163897	1	-	133154174	133162412	789624	7	187,135,36,88,66,191,144,	0,1103,1826,1940,7392,8267,9679,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	133160010	133163702	chr9:133160010-133163702	1	-	133160169	133162412	789624	4	241,66,191,44,	0,1456,2331,3648,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	133160017	133163895	chr9:133160017-133163895	1	-	133160169	133162412	789624	4	234,66,191,142,	0,1449,2324,3736,
#Partially deleted in new
chr9	133161047	133163901	chr9:133161047-133163901	1	-	133161244	133162412	789624	4	225,66,191,148,	0,419,1294,2706,
#Partially deleted in new
chr9	133161354	133163933	chr9:133161354-133163933	0	-	133161354	133161354	8553170	3	178,191,180,	0,987,2399,
#Deleted in new
chr9	133163105	133163914	chr9:133163105-133163914	0	-	133163105	133163105	8553170	2	357,161,	0,648,
#Deleted in new
chr9	133205276	133209241	chr9:133205276-133209241	1	-	133205917	133209199	789624	7	135,24,102,111,71,134,114,	0,640,1038,1949,2856,3192,3851,
#Deleted in new
chr9	133205276	133209241	chr9:133205276-133209241	0	-	133205276	133205276	789624	6	135,24,102,111,71,114,	0,640,1038,1949,2856,3851,
#Deleted in new
chr9	133205276	133209241	chr9:133205276-133209241	0	-	133206412	133209199	789624	8	135,24,102,111,106,71,134,114,	0,640,1038,1949,2563,2856,3192,3851,
#Deleted in new
chr9	133205279	133209250	chr9:133205279-133209250	3	-	133205917	133209199	789624	7	396,24,102,111,71,134,123,	0,637,1035,1946,2853,3189,3848,
#Deleted in new
chr9	133205317	133209227	chr9:133205317-133209227	1	-	133205328	133209199	789624	8	92,3,24,167,111,71,134,100,	0,94,599,997,1908,2815,3151,3810,
#Deleted in new
chr9	133224904	133228591	chr9:133224904-133228591	7	-	133224904	133224904	16724991	6	42,102,69,71,131,90,	0,244,1235,1868,3016,3597,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	133250400	133275219	chr9:133250400-133275219	0	-	133250400	133250400	8553170	7	5956,134,36,48,57,70,58,	0,7008,7696,9418,10917,11698,24761,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	133250731	133275214	chr9:133250731-133275214	0	-	133250731	133250731	8553170	2	421,53,	0,24430,
#Partially deleted in new
chr9	133255175	133275214	chr9:133255175-133275214	1	-	133255665	133275189	789624	8	1181,113,19,36,48,57,70,53,	0,2233,2348,2921,4643,6142,6923,19986,
#Partially deleted in new
chr9	133255601	133275214	chr9:133255601-133275214	3	-	133255601	133275189	789624	9	69,682,113,19,36,48,57,70,53,	0,73,1807,1922,2495,4217,5716,6497,19560,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	133302469	133302563	chr9:133302469-133302563	3	+	133302469	133302469	8553170	1	94,	0,
#Deleted in new
chr9	133317793	133318469	chr9:133317793-133318469	7	+	133317793	133317793	16724991	2	91,132,	0,544,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	133328773	133336398	chr9:133328773-133336398	3	-	133331868	133336132	789624	5	3575,213,89,210,360,	0,3774,4944,5618,7265,
#Deleted in new
chr9	133331805	133332939	chr9:133331805-133332939	0	-	133331805	133331805	8553170	2	543,392,	0,742,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	133337727	133337824	chr9:133337727-133337824	3	-	133337727	133337727	8553170	1	97,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	133338322	133347703	chr9:133338322-133347703	3	-	133341504	133346662	789624	5	3372,209,81,161,544,	0,5802,6849,8217,8837,
#Deleted in new
chr9	133338989	133339465	chr9:133338989-133339465	7	+	133338989	133338989	16724991	1	476,	0,
#Partially deleted in new
chr9	133340904	133348117	chr9:133340904-133348117	1	-	133341504	133346662	789624	5	790,209,81,161,196,	0,3220,4267,5635,7017,
#Partially deleted in new
chr9	133340904	133348117	chr9:133340904-133348117	1	-	133344114	133346662	789624	4	3429,81,161,196,	0,4267,5635,7017,
#Partially deleted in new
chr9	133340905	133347779	chr9:133340905-133347779	1	-	133344114	133346662	789624	4	3428,81,161,216,	0,4266,5634,6658,
#Partially deleted in new
chr9	133343689	133348075	chr9:133343689-133348075	0	-	133343689	133343689	8553170	3	644,81,154,	0,1482,4232,
#Partially deleted in new
chr9	133343746	133348117	chr9:133343746-133348117	1	-	133344114	133346662	789624	4	587,63,161,176,	0,1443,2793,4195,
#Partially deleted in new
chr9	133344124	133348022	chr9:133344124-133348022	0	-	133344124	133346662	789624	4	209,81,161,109,	0,1047,2415,3789,
#Partially deleted in new
chr9	133344132	133348123	chr9:133344132-133348123	0	-	133344132	133346662	789624	4	201,81,161,89,	0,1039,2407,3902,
#Partially deleted in new
chr9	133344204	133348131	chr9:133344204-133348131	0	-	133344204	133346662	789624	4	129,81,161,190,	0,967,2335,3737,
#Partially deleted in new
chr9	133346406	133348118	chr9:133346406-133348118	0	-	133346406	133346406	8553170	2	294,197,	0,1515,
#Deleted in new
chr9	133348213	133351426	chr9:133348213-133351426	3	+	133348243	133351366	0	8	33,121,150,141,80,131,70,165,	0,708,1337,1698,2026,2383,2788,3048,
#Deleted in new
chr9	133348217	133351426	chr9:133348217-133351426	0	+	133348217	133348217	8553170	7	29,121,150,141,488,70,165,	0,704,1333,1694,2022,2784,3044,
#Deleted in new
chr9	133348217	133350695	chr9:133348217-133350695	0	+	133348217	133348217	8553170	6	356,121,150,141,80,99,	0,704,1333,1694,2022,2379,
#Deleted in new
chr9	133348251	133350318	chr9:133348251-133350318	0	+	133348733	133350318	789624	5	566,121,150,141,79,	0,670,1299,1660,1988,
#Deleted in new
chr9	133348251	133351372	chr9:133348251-133351372	0	+	133348251	133348251	8553170	8	137,121,150,141,80,131,70,111,	0,670,1299,1660,1988,2345,2750,3010,
#Deleted in new
chr9	133348921	133351426	chr9:133348921-133351426	1	+	133349593	133351366	789624	7	121,61,52,80,131,70,165,	0,629,1079,1318,1675,2080,2340,
#Deleted in new
chr9	133348921	133350383	chr9:133348921-133350383	0	+	133348921	133348921	8553170	3	121,150,472,	0,629,990,
#Deleted in new
chr9	133348936	133351385	chr9:133348936-133351385	0	+	133348936	133348936	8553170	7	106,314,141,80,131,70,124,	0,450,975,1303,1660,2065,2325,
#Deleted in new
chr9	133349395	133349470	chr9:133349395-133349470	3	+	133349395	133349395	789624	1	75,	0,
#Deleted in new
chr9	133350094	133350168	chr9:133350094-133350168	3	+	133350094	133350094	789624	1	74,	0,
#Deleted in new
chr9	133350455	133350528	chr9:133350455-133350528	3	+	133350455	133350455	789624	1	73,	0,
#Deleted in new
chr9	133350846	133350912	chr9:133350846-133350912	3	+	133350846	133350846	789624	1	66,	0,
#Deleted in new
chr9	133350849	133351413	chr9:133350849-133351413	0	+	133350849	133350849	8553170	2	222,152,	0,412,
#Partially deleted in new
chr9	133351754	133356485	chr9:133351754-133356485	3	-	133351912	133356453	789624	9	228,82,163,73,192,83,134,52,86,	0,306,691,939,1994,2904,3069,4514,4645,
#Partially deleted in new
chr9	133351804	133356485	chr9:133351804-133356485	1	-	133351912	133353936	789624	8	178,82,163,73,192,83,134,86,	0,256,641,889,1944,2854,3019,4595,
#Deleted in new
chr9	133351874	133354253	chr9:133351874-133354253	0	-	133351874	133351874	8553170	5	108,82,163,73,505,	0,186,571,819,1874,
#Partially deleted in new
chr9	133351912	133356320	chr9:133351912-133356320	0	-	133351912	133351912	8553170	8	70,82,163,37,192,83,134,52,	0,148,533,781,1836,2746,2911,4356,
#Deleted in new
chr9	133356104	133356676	chr9:133356104-133356676	0	-	133356104	133356104	8553170	2	216,277,	0,295,
#Deleted in new
chr9	133356551	133361169	chr9:133356551-133361169	3	+	133356592	133361139	789624	6	119,155,104,180,170,114,	0,362,1159,3398,3713,4504,
#Deleted in new
chr9	133356577	133360107	chr9:133356577-133360107	0	+	133356577	133356577	8553170	4	93,321,104,158,	0,336,1133,3372,
#Deleted in new
chr9	133357047	133360024	chr9:133357047-133360024	0	+	133357047	133357047	8553170	3	135,104,75,	0,663,2902,
#Partially deleted in new
chr9	133361448	133376099	chr9:133361448-133376099	3	-	133363492	133375969	789624	6	2311,187,44,77,187,178,	0,3391,4536,5150,5810,14473,
#Partially deleted in new
chr9	133361449	133376166	chr9:133361449-133376166	1	-	133363728	133375969	789624	5	2310,44,77,187,245,	0,4535,5149,5809,14472,
#Partially deleted in new
chr9	133361449	133376166	chr9:133361449-133376166	1	-	133363492	133367364	789624	6	2310,187,44,77,285,245,	0,3390,4535,5149,5809,14472,
#Partially deleted in new
chr9	133361449	133376166	chr9:133361449-133376166	1	-	133363492	133367364	789624	7	2310,187,44,77,187,150,245,	0,3390,4535,5149,5809,13789,14472,
#Partially deleted in new
chr9	133362867	133376099	chr9:133362867-133376099	1	-	133363463	133375969	789624	6	608,112,44,77,187,178,	0,2047,3117,3731,4391,13054,
#Partially deleted in new
chr9	133363452	133366077	chr9:133363452-133366077	0	-	133363452	133363452	8553170	2	307,93,	0,2532,
#Partially deleted in new
chr9	133363554	133375991	chr9:133363554-133375991	0	-	133363554	133363554	8553170	5	205,187,44,187,70,	0,1285,2430,3704,12367,
#Partially deleted in new
chr9	133363794	133376043	chr9:133363794-133376043	1	-	133363874	133375969	789624	6	98,187,44,77,187,122,	0,1045,2190,2804,3464,12127,
#Partially deleted in new
chr9	133364968	133376010	chr9:133364968-133376010	0	-	133364968	133364968	8553170	5	58,44,77,285,89,	0,1016,1630,2290,10953,
#Partially deleted in new
chr9	133376366	133406096	chr9:133376366-133406096	3	+	133376473	133405421	789624	18	194,87,45,75,102,71,116,119,164,131,84,117,141,135,129,129,141,845,	0,2669,7489,9250,11080,13159,14314,17924,19233,20797,21605,24046,25371,26511,27333,27553,28422,28885,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	133379037	133384555	chr9:133379037-133384555	0	+	133379037	133379037	8553170	2	85,700,	0,4818,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	133379056	133384755	chr9:133379056-133384755	0	+	133379056	133379056	8553170	3	66,45,155,	0,4799,5544,
#Deleted in new
chr9	133393870	133395804	chr9:133393870-133395804	0	+	133393870	133393870	8553170	2	539,205,	0,1729,
#Deleted in new
chr9	133394786	133396083	chr9:133394786-133396083	0	+	133394786	133394786	8553170	2	33,484,	0,813,
#Partially deleted in new
chr9	133406058	133418096	chr9:133406058-133418096	1	-	133406952	133417844	789624	6	1014,75,75,89,169,477,	0,1748,2709,4926,8606,11561,
#Partially deleted in new
chr9	133406061	133418044	chr9:133406061-133418044	3	-	133406952	133417844	789624	8	1011,75,75,89,194,144,347,425,	0,1745,2706,4923,6237,6716,8603,11558,
#Partially deleted in new
chr9	133407005	133417977	chr9:133407005-133417977	0	-	133407005	133417844	789624	6	67,75,75,89,169,358,	0,801,1762,3979,7659,10614,
#Partially deleted in new
chr9	133411003	133417954	chr9:133411003-133417954	0	-	133411003	133411003	8553170	4	70,194,144,335,	0,1295,1774,6616,
#Partially deleted in new
chr9	133412298	133417959	chr9:133412298-133417959	0	-	133412298	133412298	8553170	4	194,144,169,340,	0,479,2366,5321,
#Partially deleted in new
chr9	133412362	133415900	chr9:133412362-133415900	0	-	133412362	133414957	789624	4	130,144,347,239,	0,415,2302,3299,
#Partially deleted in new
chr9	133414357	133459386	chr9:133414357-133459386	0	+	133414357	133414357	789624	18	287,67,158,84,125,147,105,81,182,190,121,130,183,205,151,147,177,413,	0,8743,9963,11171,11580,11841,18230,25008,25986,30505,31341,34241,35425,40057,40927,41711,42185,44616,
#Partially deleted in new
chr9	133421999	133459402	chr9:133421999-133459402	1	+	133428691	133444973	789624	26	549,67,158,84,125,147,138,163,105,152,64,127,149,121,81,182,190,121,130,183,205,151,147,177,185,429,	0,1101,2321,3529,3938,4199,6634,7939,10588,11378,11641,14829,15749,16246,17366,18344,22863,23699,26599,27783,32415,33285,34069,34543,35910,36974,
#Partially deleted in new
chr9	133421999	133459386	chr9:133421999-133459386	3	+	133422443	133459180	0	29	549,67,158,84,125,147,138,163,105,152,64,127,149,121,81,182,136,130,186,190,121,130,183,205,319,147,177,185,413,	0,1101,2321,3529,3938,4199,6634,7939,10588,11378,11641,14829,15749,16246,17366,18344,20399,20614,21376,22863,23699,26599,27783,32415,33285,34069,34543,35910,36974,
#Partially deleted in new
chr9	133422323	133459386	chr9:133422323-133459386	1	+	133422443	133459180	0	29	225,67,158,84,125,147,138,163,105,152,64,127,149,121,81,182,136,130,186,190,121,130,183,205,151,147,177,185,413,	0,777,1997,3205,3614,3875,6310,7615,10264,11054,11317,14505,15425,15922,17042,18020,20075,20290,21052,22539,23375,26275,27459,32091,32961,33745,34219,35586,36650,
#Partially deleted in new
chr9	133422323	133459386	chr9:133422323-133459386	1	+	133422443	133459180	0	29	225,67,158,84,125,147,138,70,105,152,64,127,149,121,81,182,136,130,186,190,121,130,183,205,151,147,177,185,413,	0,777,1997,3205,3614,3875,6310,7708,10264,11054,11317,14505,15425,15922,17042,18020,20075,20290,21052,22539,23375,26275,27459,32091,32961,33745,34219,35586,36650,
#Partially deleted in new
chr9	133422323	133429910	chr9:133422323-133429910	1	+	133422443	133429910	789624	8	225,67,158,84,125,147,138,211,	0,777,1997,3205,3614,3875,6310,7376,
#Partially deleted in new
chr9	133422323	133449956	chr9:133422323-133449956	0	+	133422443	133429910	789624	20	225,67,158,84,125,147,138,482,105,152,64,127,149,121,81,182,190,121,130,174,	0,777,1997,3205,3614,3875,6310,7376,10264,11054,11317,14505,15425,15922,17042,18020,22539,23375,26275,27459,
#Partially deleted in new
chr9	133422324	133448609	chr9:133422324-133448609	0	+	133422443	133433417	789624	17	224,67,158,84,125,147,105,152,127,149,121,81,182,186,190,121,11,	0,776,1996,3204,3613,3874,10263,11053,14504,15424,15921,17041,18019,21051,22538,23374,26274,
#Partially deleted in new
chr9	133455647	133459386	chr9:133455647-133459386	1	+	133456112	133459180	789624	5	152,147,177,185,413,	0,421,895,2262,3326,
#Partially deleted in new
chr9	133459964	133470787	chr9:133459964-133470787	1	+	133460066	133468711	789624	6	223,73,126,108,125,2225,	0,3518,5357,7956,8375,8598,
#Partially deleted in new
chr9	133459964	133470787	chr9:133459964-133470787	1	+	133460066	133468711	789624	5	223,73,108,125,2225,	0,3518,7956,8375,8598,
#Partially deleted in new
chr9	133459966	133470848	chr9:133459966-133470848	1	+	133460066	133468653	789624	4	221,73,108,2286,	0,3516,7954,8596,
#Partially deleted in new
chr9	133459986	133470848	chr9:133459986-133470848	3	+	133460066	133468653	789624	5	201,73,126,108,2286,	0,3496,5335,7934,8576,
#Partially deleted in new
chr9	133459986	133468619	chr9:133459986-133468619	0	+	133459986	133459986	8553170	6	201,73,124,126,108,57,	0,3496,5048,5335,7934,8576,
#Deleted in new
chr9	133459997	133465853	chr9:133459997-133465853	0	+	133459997	133459997	8553170	3	190,73,532,	0,3485,5324,
#Partially deleted in new
chr9	133462170	133468028	chr9:133462170-133468028	0	+	133462182	133468028	789624	4	49,73,126,108,	0,1312,3151,5750,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	133471094	133479096	chr9:133471094-133479096	1	-	133472020	133479059	789624	9	1082,146,109,153,212,100,207,163,129,	0,2010,2885,3866,4305,5142,5940,7159,7873,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	133471094	133479137	chr9:133471094-133479137	3	-	133472020	133479059	789624	10	1082,146,186,109,153,212,100,207,163,170,	0,2010,2320,2885,3866,4305,5142,5940,7159,7873,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	133471094	133479096	chr9:133471094-133479096	0	-	133471094	133471094	8553170	8	1082,146,674,153,212,100,207,843,	0,2010,2320,3866,4305,5142,5940,7159,
#Deleted in new
chr9	133475399	133479127	chr9:133475399-133479127	0	-	133475399	133479059	789624	5	97,100,207,163,160,	0,837,1635,2854,3568,
#Deleted in new
chr9	133475405	133479075	chr9:133475405-133479075	0	-	133475405	133477199	789624	4	91,182,207,108,	0,827,1629,3562,
#Partially deleted in new
chr9	133514585	133524946	chr9:133514585-133524946	3	-	133514635	133524844	789624	5	200,117,149,115,237,	0,905,4288,5588,10124,
#Partially deleted in new
chr9	133515530	133528612	chr9:133515530-133528612	0	-	133515530	133515530	8553170	4	77,149,115,190,	0,3343,4643,12892,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chr9	133532163	133575519	chr9:133532163-133575519	3	+	133536712	133574864	789624	19	407,240,143,76,103,146,124,81,176,337,373,98,127,214,156,171,177,145,774,	0,4399,5241,6185,7607,8434,8714,12306,14874,22193,23394,29034,34772,36109,36439,37244,38167,41679,42582,
#Partially deleted in new
chr9	133534308	133575519	chr9:133534308-133575519	1	+	133534740	133574864	789624	19	609,240,143,76,103,146,124,81,176,337,373,98,127,214,156,171,177,145,774,	0,2254,3096,4040,5462,6289,6569,10161,12729,20048,21249,26889,32627,33964,34294,35099,36022,39534,40437,
#Partially deleted in new
chr9	133534852	133575518	chr9:133534852-133575518	1	+	133536712	133574864	789624	19	65,240,143,76,103,146,124,81,176,337,373,98,127,214,156,171,177,145,773,	0,1710,2552,3496,4918,5745,6025,9617,12185,19504,20705,26345,32083,33420,33750,34555,35478,38990,39893,
#Deleted in new
chr9	133578414	133580246	chr9:133578414-133580246	1	-	133579021	133580223	789624	2	1015,116,	0,1716,
#Deleted in new
chr9	133578956	133586197	chr9:133578956-133586197	3	-	133579021	133580223	789624	3	473,116,222,	0,1174,7019,
#Partially deleted in new
chr9	133611797	133633099	chr9:133611797-133633099	3	-	133611797	133611797	8553170	2	1877,113,	0,21189,
#Partially deleted in new
chr9	133635347	133659344	chr9:133635347-133659344	3	+	133636371	133658447	0	12	1363,147,258,177,103,167,144,39,60,128,160,1029,	0,4498,6859,8065,8870,12498,16286,16898,17592,21175,21722,22968,
#Partially deleted in new
chr9	133636377	133643590	chr9:133636377-133643590	0	+	133636377	133643590	789624	3	333,258,178,	0,5829,7035,
#Deleted in new
chr9	133654585	133657313	chr9:133654585-133657313	3	-	133654585	133654585	789624	2	1952,187,	0,2541,
#Partially deleted in new
chr9	133663559	133739920	chr9:133663559-133739920	3	-	133663888	133734173	789624	21	455,136,169,163,94,148,114,139,114,84,142,91,87,130,105,101,124,180,179,361,228,	0,3175,7024,7975,21633,26820,30698,32663,39356,41388,44727,49059,49478,53766,55378,66205,66504,67745,68863,70283,76133,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	133663563	133703701	chr9:133663563-133703701	1	-	133663888	133696313	789624	9	451,202,169,163,94,148,114,139,786,	0,3171,7020,7971,21629,26816,30694,32659,39352,
#Partially deleted in new
chr9	133663563	133730163	chr9:133663563-133730163	1	-	133663995	133729839	789624	18	451,32,103,169,163,94,148,114,139,114,84,142,91,87,130,105,101,100,	0,3171,3204,7020,7971,21629,26816,30694,32659,39352,41384,44723,49055,49474,53762,55374,66201,66500,
#Partially deleted in new
chr9	133663563	133738357	chr9:133663563-133738357	1	-	133663888	133734173	789624	21	451,136,169,163,94,148,114,139,114,84,142,91,87,130,105,101,124,180,179,361,104,	0,3171,7020,7971,21629,26816,30694,32659,39352,41384,44723,49055,49474,53762,55374,66201,66500,67741,68859,70279,74690,
#Partially deleted in new
chr9	133663971	133667123	chr9:133663971-133667123	0	-	133663971	133663971	8553170	2	43,389,	0,2763,
#Partially deleted in new
chr9	133694353	133738355	chr9:133694353-133738355	0	-	133694353	133734173	789624	15	18,139,114,84,142,91,87,130,105,101,124,180,179,361,102,	0,1869,8562,10594,13933,18265,18684,22972,24584,35411,35710,36951,38069,39489,43900,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	133718321	133734043	chr9:133718321-133734043	1	-	133718658	133733906	789624	7	436,105,101,124,180,179,201,	0,616,11443,11742,12983,14101,15521,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	133725392	133739955	chr9:133725392-133739955	1	-	133725392	133734173	789624	7	276,101,124,180,179,361,263,	0,4372,4671,5912,7030,8450,14300,
#Partially deleted in new
chr9	133761893	133992310	chr9:133761893-133992310	1	-	133764061	133992278	0	30	2216,155,87,124,88,117,53,75,128,22,17,89,102,110,15,133,86,87,69,96,100,101,69,99,15,103,69,59,117,236,	0,6548,7523,8484,10065,13041,14134,15495,16868,18024,18800,21609,22423,23882,25352,26460,27364,29889,33774,34535,35816,44187,45364,47146,48297,50220,72378,99480,177209,230181,
#Partially deleted in new
chr9	133761893	133992604	chr9:133761893-133992604	1	-	133764061	133992278	0	28	2216,155,87,124,88,117,53,75,128,22,17,89,102,110,133,86,87,69,96,100,101,69,99,103,69,59,117,530,	0,6548,7523,8484,10065,13041,14134,15495,16868,18024,18800,21609,22423,23882,26460,27364,29889,33774,34535,35816,44187,45364,47146,50220,72378,99480,177209,230181,
#Partially deleted in new
chr9	133761893	133992281	chr9:133761893-133992281	3	-	133764061	133992278	0	27	2216,155,124,88,117,53,75,128,22,17,89,102,110,133,86,87,69,96,100,101,69,99,103,69,59,117,207,	0,6548,8484,10065,13041,14134,15495,16868,18024,18800,21609,22423,23882,26460,27364,29889,33774,34535,35816,44187,45364,47146,50220,72378,99480,177209,230181,
#Partially deleted in new
chr9	133861211	133992259	chr9:133861211-133992259	0	-	133861211	133861211	8553170	3	221,117,185,	0,77891,130863,
#Partially deleted in new
chr9	133925850	133939301	chr9:133925850-133939301	0	-	133925850	133925850	8553170	4	98,112,97,199,	0,365,1945,13252,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	134025438	134031585	chr9:134025438-134031585	1	+	134026747	134027002	789624	3	98,246,5378,	0,406,769,
#Partially deleted in new
chr9	134025485	134029254	chr9:134025485-134029254	0	+	134025485	134025485	8553170	4	51,246,342,429,	0,359,722,3340,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	134025494	134028102	chr9:134025494-134028102	3	+	134026747	134027002	789624	2	42,2258,	0,350,
#Partially deleted in new
chr9	134027150	134029515	chr9:134027150-134029515	0	+	134027150	134027150	8553170	2	112,690,	0,1675,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	134027751	134031435	chr9:134027751-134031435	0	+	134027751	134027751	8553170	2	682,90,	0,3594,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	134028770	134030459	chr9:134028770-134030459	1	+	134029293	134029671	789624	1	1689,	0,
#Partially deleted in new
chr9	134029038	134034666	chr9:134029038-134034666	0	+	134029038	134029038	8553170	2	77,155,	0,5473,
#Partially deleted in new
chr9	134030304	134068017	chr9:134030304-134068017	3	-	134033589	134053477	0	12	3401,129,293,236,192,129,372,215,148,138,326,73,	0,4396,5727,9729,11455,14988,17778,20069,21257,22001,22960,37640,
#Partially deleted in new
chr9	134033401	134041794	chr9:134033401-134041794	0	-	134033401	134033401	8553170	4	304,129,293,35,	0,1299,2630,8358,
#Partially deleted in new
chr9	134036027	134068535	chr9:134036027-134068535	1	-	134036563	134053477	0	10	564,236,192,129,372,215,148,138,326,209,	0,4006,5732,9265,12055,14346,15534,16278,17237,32299,
#Partially deleted in new
chr9	134048001	134050427	chr9:134048001-134050427	0	-	134048001	134048001	8553170	2	453,54,	0,2372,
#Deleted in new
chr9	134052432	134056012	chr9:134052432-134056012	0	-	134052432	134053477	789624	3	11,326,237,	0,832,3343,
#Deleted in new
chr9	134053417	134054140	chr9:134053417-134054140	0	-	134053417	134053477	789624	2	173,426,	0,297,
#Deleted in new
chr9	134054289	134058805	chr9:134054289-134058805	3	+	134054289	134054289	789624	3	203,65,1844,	0,2360,2672,
#Deleted in new
chr9	134078903	134079444	chr9:134078903-134079444	7	+	134078903	134078903	16724991	1	541,	0,
#Partially deleted in new
chr9	134132241	134135772	chr9:134132241-134135772	3	-	134132241	134132241	8553170	2	232,587,	0,2944,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	134134215	134135649	chr9:134134215-134135649	0	-	134134215	134134215	8553170	2	155,464,	0,970,
#Partially deleted in new
chr9	134135364	134140790	chr9:134135364-134140790	0	+	134139877	134140790	789624	3	478,139,88,	0,4455,5338,
#Partially deleted in new
chr9	134135376	134141974	chr9:134135376-134141974	0	+	134139877	134141974	789624	6	65,164,139,109,74,26,	0,302,4443,5326,6133,6572,
#Partially deleted in new
chr9	134136087	134159968	chr9:134136087-134159968	3	+	134139877	134157993	0	14	113,139,109,74,90,90,84,56,47,76,34,75,88,2076,	0,3732,4615,5422,5861,6245,6548,12200,15895,18378,19252,19605,20418,21805,
#Deleted in new
chr9	134164438	134164564	chr9:134164438-134164564	3	-	134164438	134164438	5263520	1	126,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	134168768	134169340	chr9:134168768-134169340	3	+	134168768	134168768	8553170	1	572,	0,
#Partially deleted in new
chr9	134293930	134295397	chr9:134293930-134295397	3	-	134293930	134293930	789624	2	656,87,	0,1380,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	134298462	134300413	chr9:134298462-134300413	3	+	134298462	134298462	8553170	1	1951,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	134317097	134406394	chr9:134317097-134406394	0	+	134317097	134317097	8553170	3	405,47,4763,	0,2340,84534,
#Partially deleted in new
chr9	134326579	134437019	chr9:134326579-134437019	3	+	134326631	134436614	0	10	80,251,151,180,170,130,133,92,106,553,	0,75052,81569,82360,90578,95096,102528,105325,107522,109887,
#Partially deleted in new
chr9	134371970	134440585	chr9:134371970-134440585	0	+	134371970	134371970	8553170	12	169,124,145,251,151,180,170,130,133,92,106,4119,	0,2036,29425,29661,36178,36969,45187,49705,57137,59934,62131,64496,
#Deleted in new
chr9	134379410	134379472	chr9:134379410-134379472	3	+	134379410	134379410	5263520	1	62,	0,
#Partially deleted in new
chr9	134386121	134401882	chr9:134386121-134401882	0	+	134386272	134401882	8553170	2	269,251,	0,15510,
#Partially deleted in new
chr9	134505471	134521442	chr9:134505471-134521442	3	+	134505471	134505471	8553170	3	75,156,219,	0,14993,15752,
#Partially deleted in new
chr9	134527181	134545244	chr9:134527181-134545244	3	+	134527181	134527181	8553170	2	103,325,	0,17738,
#Deleted in new
chr9	134552737	134553897	chr9:134552737-134553897	3	+	134552737	134552737	8553170	2	104,176,	0,984,
#Partially deleted in new
chr9	134641773	134844843	chr9:134641773-134844843	3	+	134642187	134842303	0	66	523,168,214,163,132,138,240,168,57,42,63,75,93,57,54,54,54,54,54,45,54,45,54,45,54,45,54,45,54,108,54,54,45,54,45,54,54,54,108,90,54,108,108,54,54,108,54,108,54,108,54,54,54,54,108,54,54,108,54,36,54,256,113,69,234,2687,	0,49138,58135,59397,85492,86896,88462,89722,90297,96700,96972,108768,109016,110815,112076,112499,114991,116469,120151,121919,123907,124680,125226,125536,126636,131016,133085,138328,140893,143215,144221,147381,153308,153488,154600,155074,156634,160180,161114,163201,163387,164415,167409,168481,169565,169718,170675,170831,172209,173023,173802,174161,175252,176004,176882,177074,177226,178342,180323,181224,181642,182826,184018,188202,193197,200383,
#Partially deleted in new
chr9	134641804	134844840	chr9:134641804-134844840	1	+	134642187	134842303	789624	66	492,168,214,163,132,138,240,168,57,42,63,75,93,57,54,54,54,54,54,45,54,45,54,45,54,45,54,45,54,108,54,54,45,54,45,54,54,54,108,90,54,108,108,54,54,108,54,108,54,108,54,54,54,54,108,54,54,108,54,36,54,256,113,69,234,2684,	0,49107,58104,59366,85461,86865,88431,89691,90266,96669,96941,108737,108985,110784,112045,112468,114960,116438,120120,121888,123876,124649,125195,125505,126605,130985,133054,138297,140862,143184,144190,147350,153277,153457,154569,155043,156603,160149,161083,163170,163356,164384,167378,168450,169534,169687,170644,170800,172178,172992,173771,174130,175221,175973,176851,177043,177195,178311,180292,181193,181611,182795,183987,188303,193166,200352,
#Partially deleted in new
chr9	134649384	134652843	chr9:134649384-134652843	3	-	134649384	134649384	789624	2	200,136,	0,3323,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	134653184	134709227	chr9:134653184-134709227	0	+	134653184	134653184	8553170	6	295,168,236,214,163,754,	0,37727,38408,46724,47986,55289,
#Deleted in new
chr9	134731592	134732669	chr9:134731592-134732669	0	+	134731592	134731592	8553170	2	71,599,	0,478,
#Deleted in new
chr9	134808960	134810457	chr9:134808960-134810457	0	+	134808960	134808960	8553170	2	330,203,	0,1294,
#Deleted in new
chr9	134822921	134830353	chr9:134822921-134830353	0	+	134822921	134822921	8553170	5	112,54,256,113,378,	0,494,1678,2870,7054,
#Partially deleted in new
chr9	134824643	134835204	chr9:134824643-134835204	0	+	134824643	134835204	789624	4	212,113,69,234,	0,1148,5464,10327,
#Partially deleted in new
chr9	134824721	134832876	chr9:134824721-134832876	0	+	134824721	134824721	8553170	4	134,113,201,135,	0,1070,5254,8020,
#Deleted in new
chr9	134849297	134849369	chr9:134849297-134849369	3	-	134849297	134849297	5263520	1	72,	0,
#Deleted in new
chr9	134849486	134849564	chr9:134849486-134849564	3	-	134849486	134849486	5263520	1	78,	0,
#Deleted in new
chr9	134849608	134849682	chr9:134849608-134849682	3	-	134849608	134849608	5263520	1	74,	0,
#Deleted in new
chr9	134850124	134850272	chr9:134850124-134850272	3	-	134850124	134850124	5263520	1	148,	0,
#Deleted in new
chr9	134850276	134850356	chr9:134850276-134850356	3	-	134850276	134850276	5263520	1	80,	0,
#Deleted in new
chr9	134850569	134850641	chr9:134850569-134850641	3	-	134850569	134850569	5263520	1	72,	0,
#Deleted in new
chr9	134850741	134850807	chr9:134850741-134850807	3	-	134850741	134850741	5263520	1	66,	0,
#Deleted in new
chr9	134868235	134868475	chr9:134868235-134868475	7	+	134868235	134868235	16724991	1	240,	0,
#Partially deleted in new
chr9	134880811	134887520	chr9:134880811-134887520	3	+	134880821	134887415	0	8	110,114,54,33,128,130,135,353,	0,1714,2490,3928,4427,4956,5618,6356,
#Partially deleted in new
chr9	134880811	134887520	chr9:134880811-134887520	1	+	134880821	134887415	0	7	110,54,33,128,130,135,353,	0,2490,3928,4427,4956,5618,6356,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	134905889	134917877	chr9:134905889-134917877	3	-	134909169	134917871	789624	8	3821,74,128,33,36,54,114,109,	0,6652,7126,7691,8495,8866,10458,11879,
#Partially deleted in new
chr9	134909584	134917963	chr9:134909584-134917963	1	-	134909797	134917871	0	9	461,135,130,128,33,36,54,114,195,	0,1548,2901,3431,3996,4800,5171,6763,8184,
#Partially deleted in new
chr9	134937150	134943195	chr9:134937150-134943195	3	+	134937150	134937150	8553170	3	40,141,281,	0,4317,5764,
#Deleted in new
chr9	134992957	134995854	chr9:134992957-134995854	3	+	134992957	134992957	8553170	1	2897,	0,
#Partially deleted in new
chr9	135075421	135098107	chr9:135075421-135098107	1	+	135075706	135097786	0	4	381,150,156,327,	0,14773,20442,22359,
#Deleted in new
chr9	135075421	135077391	chr9:135075421-135077391	1	+	135075706	135077219	789624	2	381,580,	0,1390,
#Partially deleted in new
chr9	135075519	135121178	chr9:135075519-135121178	1	+	135075706	135120178	0	6	283,150,156,220,107,1675,	0,14675,20344,22766,31229,43984,
#Deleted in new
chr9	135075665	135076487	chr9:135075665-135076487	1	+	135075706	135076350	789624	2	137,431,	0,391,
#Deleted in new
chr9	135086553	135098352	chr9:135086553-135098352	0	+	135086605	135098352	789624	4	169,150,156,67,	0,3641,9310,11732,
#Partially deleted in new
chr9	135087259	135121179	chr9:135087259-135121179	1	+	135087373	135120178	0	6	183,150,156,220,107,1676,	0,2935,8604,11026,19489,32244,
#Deleted in new
chr9	135087668	135098466	chr9:135087668-135098466	0	+	135090293	135098466	789624	4	59,150,156,181,	0,2526,8195,10617,
#Deleted in new
chr9	135087673	135098065	chr9:135087673-135098065	1	+	135087989	135097786	0	4	466,150,156,285,	0,2521,8190,10107,
#Partially deleted in new
chr9	135087738	135120913	chr9:135087738-135120913	3	+	135087989	135120178	0	6	401,150,156,220,107,1410,	0,2456,8125,10547,19010,31765,
#Partially deleted in new
chr9	135095059	135119654	chr9:135095059-135119654	0	+	135095872	135119654	789624	5	163,150,220,107,151,	0,810,3226,11689,24444,
#Partially deleted in new
chr9	135095985	135119976	chr9:135095985-135119976	0	+	135095985	135119547	789624	3	34,220,473,	0,2300,23518,
#Partially deleted in new
chr9	135105639	135120911	chr9:135105639-135120911	0	+	135105639	135105639	8553170	2	1216,1408,	0,13864,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	135204721	135237597	chr9:135204721-135237597	3	-	135204721	135204721	8553170	2	473,54,	0,32822,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	135245695	135252708	chr9:135245695-135252708	3	-	135245695	135245695	8553170	2	539,347,	0,6666,
#Deleted in new
chr9	135343248	135346562	chr9:135343248-135346562	3	+	135343248	135343248	8553170	3	223,432,1269,	0,773,2045,
#Deleted in new
chr9	135352683	135354220	chr9:135352683-135354220	3	+	135352683	135352683	8553170	3	34,137,219,	0,488,1318,
#Partially deleted in new
chr9	135447445	135450154	chr9:135447445-135450154	7	+	135447445	135447445	16724991	5	424,698,27,150,60,	0,1014,1860,2190,2649,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	135462726	135472249	chr9:135462726-135472249	1	-	135462726	135462726	789624	3	2124,622,173,	0,5361,9350,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	135468171	135480777	chr9:135468171-135480777	3	-	135468171	135468171	8553170	2	538,105,	0,12501,
#Partially deleted in new
chr9	135471625	135480718	chr9:135471625-135480718	0	-	135471625	135471625	8553170	2	368,46,	0,9047,
#Partially deleted in new
chr9	135479078	135488893	chr9:135479078-135488893	3	+	135484510	135488140	789624	4	33,133,133,4445,	0,3604,4871,5370,
#Partially deleted in new
chr9	135479662	135488893	chr9:135479662-135488893	1	+	135484510	135488140	789624	3	62,133,4445,	0,4287,4786,
#Partially deleted in new
chr9	135479801	135488893	chr9:135479801-135488893	1	+	135484510	135488140	789624	4	221,133,133,4445,	0,2881,4148,4647,
#Deleted in new
chr9	135480314	135480738	chr9:135480314-135480738	0	-	135480314	135480314	8553170	1	424,	0,
#Partially deleted in new
chr9	135482681	135488613	chr9:135482681-135488613	0	+	135482681	135482681	8553170	3	134,133,142,	0,1268,5790,
#Deleted in new
chr9	135483362	135488893	chr9:135483362-135488893	1	+	135484510	135488140	789624	3	191,133,4445,	0,587,1086,
#Deleted in new
chr9	135484391	135488893	chr9:135484391-135488893	1	+	135484510	135488140	789624	1	4502,	0,
#Partially deleted in new
chr9	135495180	135500518	chr9:135495180-135500518	1	-	135495512	135499851	789624	3	389,79,810,	0,3404,4528,
#Partially deleted in new
chr9	135495180	135501734	chr9:135495180-135501734	1	-	135495512	135499851	789624	4	389,79,207,106,	0,3404,4528,6448,
#Partially deleted in new
chr9	135495180	135499872	chr9:135495180-135499872	3	-	135495426	135499851	789624	3	435,79,164,	0,3404,4528,
#Partially deleted in new
chr9	135495440	135499021	chr9:135495440-135499021	0	-	135495440	135495440	8553170	2	175,437,	0,3144,
#Partially deleted in new
chr9	135495451	135499518	chr9:135495451-135499518	0	-	135495512	135499518	789624	3	118,79,76,	0,3133,3991,
#Deleted in new
chr9	135499983	135504673	chr9:135499983-135504673	3	+	135500710	135504133	0	5	68,184,126,130,1132,	0,586,1014,1860,3558,
#Deleted in new
chr9	135500630	135504672	chr9:135500630-135504672	1	+	135500710	135504133	0	4	123,126,130,1131,	0,367,1213,2911,
#Deleted in new
chr9	135500698	135503960	chr9:135500698-135503960	0	+	135500698	135500698	8553170	5	55,126,130,198,419,	0,299,1145,1370,2843,
#Deleted in new
chr9	135500706	135503976	chr9:135500706-135503976	0	+	135500706	135500706	8553170	5	47,126,130,143,435,	0,291,1137,2429,2835,
#Deleted in new
chr9	135500714	135503594	chr9:135500714-135503594	0	+	135500714	135500714	8553170	4	39,329,130,53,	0,283,1129,2827,
#Deleted in new
chr9	135500714	135503955	chr9:135500714-135503955	0	+	135500714	135500714	8553170	4	39,126,275,414,	0,283,984,2827,
#Deleted in new
chr9	135500912	135504010	chr9:135500912-135504010	0	+	135500912	135504010	789624	3	211,130,469,	0,931,2629,
#Deleted in new
chr9	135502587	135503986	chr9:135502587-135503986	0	+	135502587	135502587	8553170	2	50,445,	0,954,
#Deleted in new
chr9	135503272	135506447	chr9:135503272-135506447	3	-	135503272	135503272	789624	3	429,84,604,	0,963,2571,
#Deleted in new
chr9	135521437	135526532	chr9:135521437-135526532	3	+	135521497	135525157	0	7	150,131,71,111,102,27,184,	0,609,1794,2442,3392,3694,4911,
#Deleted in new
chr9	135521454	135526532	chr9:135521454-135526532	1	+	135521497	135525157	0	7	133,131,71,111,102,27,189,	0,592,1777,2425,3375,3677,4889,
#Deleted in new
chr9	135546138	135549956	chr9:135546138-135549956	1	+	135546180	135549944	789624	7	114,134,71,111,167,24,120,	0,639,1039,1732,2504,3169,3698,
#Deleted in new
chr9	135546138	135549956	chr9:135546138-135549956	1	+	135546180	135549330	789624	6	114,71,111,167,24,120,	0,1039,1732,2504,3169,3698,
#Deleted in new
chr9	135546138	135549969	chr9:135546138-135549969	3	+	135546180	135549330	0	7	114,134,71,111,102,24,133,	0,639,1039,1732,2569,3169,3698,
#Deleted in new
chr9	135546138	135549956	chr9:135546138-135549956	0	+	135546180	135548711	789624	7	114,134,71,111,151,24,120,	0,639,1039,1732,2520,3169,3698,
#Deleted in new
chr9	135546138	135549956	chr9:135546138-135549956	0	+	135546180	135548711	789624	6	114,71,111,102,24,120,	0,1039,1732,2569,3169,3698,
#Deleted in new
chr9	135546138	135549919	chr9:135546138-135549919	1	+	135546180	135549919	789624	7	114,134,71,111,167,28,80,	0,639,1039,1732,2504,3169,3701,
#Deleted in new
chr9	135546154	135549946	chr9:135546154-135549946	1	+	135546180	135549330	0	7	98,134,71,111,102,24,374,	0,623,1023,1716,2553,3153,3418,
#Partially deleted in new
chr9	135561755	135566776	chr9:135561755-135566776	0	+	135561801	135565502	789624	7	142,140,74,111,101,46,224,	0,538,1064,2488,3658,4029,4797,
#Partially deleted in new
chr9	135561757	135566955	chr9:135561757-135566955	3	+	135561801	135565801	0	7	140,140,74,111,105,17,403,	0,536,1062,2486,3652,4027,4795,
#Partially deleted in new
chr9	135561757	135566776	chr9:135561757-135566776	1	+	135561801	135565801	789624	6	140,140,74,105,46,224,	0,536,1062,3652,4027,4795,
#Partially deleted in new
chr9	135561766	135566776	chr9:135561766-135566776	1	+	135561801	135565801	0	7	131,140,74,111,105,46,244,	0,527,1053,2477,3643,4018,4766,
#Partially deleted in new
chr9	135561776	135566776	chr9:135561776-135566776	1	+	135561801	135565801	0	7	121,140,74,111,105,46,224,	0,517,1043,2467,3633,4008,4776,
#Partially deleted in new
chr9	135561845	135566955	chr9:135561845-135566955	0	+	135561845	135565801	789624	6	52,74,74,177,46,403,	0,514,974,3492,3939,4707,
#Partially deleted in new
chr9	135562361	135566783	chr9:135562361-135566783	0	+	135562361	135565801	789624	6	72,74,111,105,17,250,	0,458,1882,3048,3423,4172,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	135565431	135566666	chr9:135565431-135566666	0	+	135565431	135565801	789624	3	83,17,475,	0,353,760,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	135574950	135587112	chr9:135574950-135587112	3	+	135574950	135574950	789624	5	144,131,58,74,2064,	0,2399,6672,7985,10098,
#Deleted in new
chr9	135583742	135585272	chr9:135583742-135585272	0	+	135583742	135583742	8553170	2	118,224,	0,1306,
#Deleted in new
chr9	135588001	135591975	chr9:135588001-135591975	7	+	135588001	135588001	16724991	5	96,140,74,111,105,	0,591,1409,2789,3869,
#Deleted in new
chr9	135588608	135590835	chr9:135588608-135590835	4	+	135588608	135588608	16724991	2	124,45,	0,2182,
#Partially deleted in new
chr9	135604344	135616997	chr9:135604344-135616997	0	+	135604344	135604344	8553170	5	39,250,137,74,89,	0,870,11017,12242,12564,
#Partially deleted in new
chr9	135614239	135618952	chr9:135614239-135618952	3	+	135614239	135618952	789624	6	111,137,74,108,96,20,	0,1122,2347,2669,3709,4693,
#Partially deleted in new
chr9	135623655	135639540	chr9:135623655-135639540	3	-	135624096	135639187	789624	5	1015,138,48,77,248,	0,2413,7775,15461,15637,
#Partially deleted in new
chr9	135623655	135639540	chr9:135623655-135639540	1	-	135624000	135639187	789624	6	441,571,138,48,77,248,	0,444,2413,7775,15461,15637,
#Deleted in new
chr9	135663321	135666103	chr9:135663321-135666103	3	+	135663321	135666103	789624	7	96,137,74,111,57,48,8,	0,840,1400,1923,2374,2539,2774,
#Deleted in new
chr9	135663321	135665913	chr9:135663321-135665913	1	+	135663321	135665913	789624	6	96,137,74,111,57,53,	0,840,1400,1923,2374,2539,
#Deleted in new
chr9	135663335	135665908	chr9:135663335-135665908	0	+	135663335	135663335	8553170	6	82,137,74,111,102,48,	0,826,1386,1909,2315,2525,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	135665221	135666422	chr9:135665221-135666422	0	+	135665221	135665221	8553170	3	134,102,562,	0,429,639,
#Deleted in new
chr9	135693406	135699528	chr9:135693406-135699528	3	-	135694345	135699467	789624	7	1051,214,194,122,148,132,126,	0,1643,3205,4099,4922,5588,5996,
#Deleted in new
chr9	135693410	135699528	chr9:135693410-135699528	1	-	135693596	135699467	789624	8	404,71,214,194,122,148,132,126,	0,976,1639,3201,4095,4918,5584,5992,
#Partially deleted in new
chr9	135702184	135792161	chr9:135702184-135792161	1	+	135702258	135792161	789624	32	184,144,80,100,57,49,60,75,84,95,181,165,137,64,109,109,150,239,235,106,173,72,135,112,102,84,129,21,325,63,85,121,	0,12392,47913,48757,51752,52936,54688,54971,55113,56229,57494,62846,63439,66425,66644,67762,68113,68672,70530,73125,75153,76239,76503,77174,81839,82350,82576,83125,84012,85915,89612,89856,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chr9	135702184	135795508	chr9:135702184-135795508	1	+	135702258	135792161	789624	31	184,80,100,57,49,60,75,84,95,190,165,137,64,109,109,150,239,235,106,173,72,135,112,102,84,129,21,325,63,85,3468,	0,47913,48757,51752,52936,54688,54971,55113,56229,57485,62846,63439,66425,66644,67762,68113,68672,70530,73125,75153,76239,76503,77174,81839,82350,82576,83125,84012,85915,89612,89856,
#Partially deleted in new
chr9	135702191	135793103	chr9:135702191-135793103	3	+	135702258	135792161	789624	31	177,144,80,100,57,49,60,75,84,95,181,165,137,64,109,109,150,239,235,106,173,72,135,112,102,84,129,21,325,85,1063,	0,12385,47906,48750,51745,52929,54681,54964,55106,56222,57487,62839,63432,66418,66637,67755,68106,68665,70523,73118,75146,76232,76496,77167,81832,82343,82569,83118,84005,89605,89849,
#Partially deleted in new
chr9	135702212	135793103	chr9:135702212-135793103	0	+	135702258	135752413	789624	32	156,144,80,79,57,49,60,75,84,95,181,165,137,64,109,109,150,239,235,106,173,72,135,112,102,84,129,21,325,63,85,1063,	0,12364,47885,50166,51724,52908,54660,54943,55085,56201,57466,62818,63411,66397,66616,67734,68085,68644,70502,73097,75125,76211,76475,77146,81811,82322,82548,83097,83984,85887,89584,89828,
#Deleted in new
chr9	135702330	135703064	chr9:135702330-135703064	0	+	135702330	135702330	8553170	2	38,62,	0,672,
#Partially deleted in new
chr9	135703082	135714610	chr9:135703082-135714610	0	+	135703082	135703082	8553170	2	66,34,	0,11494,
#Partially deleted in new
chr9	135714457	135759839	chr9:135714457-135759839	0	+	135714625	135759839	789624	10	263,80,100,57,49,60,75,84,95,161,	0,35640,36484,39479,40663,42415,42698,42840,43956,45221,
#Partially deleted in new
chr9	135714519	135792161	chr9:135714519-135792161	1	+	135714625	135792161	789624	32	201,42,80,100,57,49,60,75,84,95,181,165,137,64,109,109,150,239,235,106,173,72,135,112,102,84,129,21,325,63,85,121,	0,28252,35578,36422,39417,40601,42353,42636,42778,43894,45159,50511,51104,54090,54309,55427,55778,56337,58195,60790,62818,63904,64168,64839,69504,70015,70241,70790,71677,73580,77277,77521,
#Partially deleted in new
chr9	135714625	135792161	chr9:135714625-135792161	1	+	135714625	135792161	789624	31	95,80,100,57,49,60,75,84,95,181,165,137,64,109,109,150,239,229,106,173,72,135,112,102,84,129,21,325,63,85,121,	0,35472,36316,39311,40495,42247,42530,42672,43788,45053,50405,50998,53984,54203,55321,55672,56231,58095,60684,62712,63798,64062,64733,69398,69909,70135,70684,71571,73474,77171,77415,
#Partially deleted in new
chr9	135736516	135793618	chr9:135736516-135793618	1	+	135736632	135792161	789624	31	271,80,100,57,49,60,75,84,95,181,165,137,64,109,109,150,239,235,106,173,72,135,112,102,84,129,21,325,63,85,1578,	0,13581,14425,17420,18604,20356,20639,20781,21897,23162,28514,29107,32093,32312,33430,33781,34340,36198,38793,40821,41907,42171,42842,47507,48018,48244,48793,49680,51583,55280,55524,
#Partially deleted in new
chr9	135736614	135792170	chr9:135736614-135792170	1	+	135736632	135792161	789624	31	173,42,80,100,57,49,60,75,84,95,181,165,137,64,109,109,150,239,235,106,173,72,135,112,102,84,129,21,325,85,130,	0,6157,13483,14327,17322,18506,20258,20541,20683,21799,23064,28416,29009,31995,32214,33332,33683,34242,36100,38695,40723,41809,42073,42744,47409,47920,48146,48695,49582,55182,55426,
#Partially deleted in new
chr9	135736624	135792387	chr9:135736624-135792387	1	+	135736632	135792161	789624	32	163,42,80,100,57,49,60,75,84,95,181,165,137,64,109,109,150,239,235,106,173,72,135,112,102,84,129,21,325,63,85,347,	0,6147,13473,14317,17312,18496,20248,20531,20673,21789,23054,28406,28999,31985,32204,33322,33673,34232,36090,38685,40713,41799,42063,42734,47399,47910,48136,48685,49572,51475,55172,55416,
#Partially deleted in new
chr9	135736629	135792161	chr9:135736629-135792161	1	+	135736632	135792161	789624	31	158,42,80,100,57,49,60,75,84,95,181,165,137,64,109,109,150,239,235,106,173,72,135,112,102,84,129,325,63,85,121,	0,6142,13468,14312,17307,18491,20243,20526,20668,21784,23049,28401,28994,31980,32199,33317,33668,34227,36085,38680,40708,41794,42058,42729,47394,47905,48131,49567,51470,55167,55411,
#Partially deleted in new
chr9	135736632	135792161	chr9:135736632-135792161	1	+	135736632	135792161	789624	32	155,42,80,100,57,49,60,75,84,95,181,165,137,64,109,109,150,239,229,106,173,72,135,112,102,84,129,21,325,63,85,121,	0,6139,13465,14309,17304,18488,20240,20523,20665,21781,23046,28398,28991,31977,32196,33314,33665,34224,36088,38677,40705,41791,42055,42726,47391,47902,48128,48677,49564,51467,55164,55408,
#Deleted in new
chr9	135736726	135736993	chr9:135736726-135736993	0	+	135736726	135736726	8553170	2	61,39,	0,228,
#Partially deleted in new
chr9	135736959	135750177	chr9:135736959-135750177	0	+	135736959	135736959	8553170	2	59,80,	0,13138,
#Deleted in new
chr9	135750108	135750580	chr9:135750108-135750580	0	+	135750108	135750108	8553170	2	69,31,	0,441,
#Deleted in new
chr9	135751019	135752129	chr9:135751019-135752129	0	+	135751019	135751019	8553170	2	22,78,	0,1032,
#Partially deleted in new
chr9	135753750	135786399	chr9:135753750-135786399	0	+	135753750	135753750	8553170	23	243,49,60,226,95,181,165,137,64,109,109,150,239,235,106,173,72,135,112,102,84,129,1090,	0,1370,3122,3405,4663,5928,11280,11873,14859,15078,16196,16547,17106,18964,21559,23587,24673,24937,25608,30273,30784,31010,31559,
#Deleted in new
chr9	135765684	135768494	chr9:135765684-135768494	0	+	135765684	135765684	8553170	2	76,24,	0,2786,
#Deleted in new
chr9	135765696	135766756	chr9:135765696-135766756	0	+	135765696	135765696	8553170	2	64,76,	0,984,
#Deleted in new
chr9	135765733	135768848	chr9:135765733-135768848	0	+	135765733	135768848	789624	3	27,64,68,	0,2876,3047,
#Deleted in new
chr9	135766705	135768645	chr9:135766705-135768645	0	+	135766705	135766705	8553170	2	64,36,	0,1904,
#Deleted in new
chr9	135768626	135768830	chr9:135768626-135768830	0	+	135768626	135768830	789624	2	47,53,	0,151,
#Deleted in new
chr9	135771113	135772752	chr9:135771113-135772752	0	+	135771113	135771113	8553170	2	62,38,	0,1601,
#Partially deleted in new
chr9	135772857	135784858	chr9:135772857-135784858	0	+	135772857	135778761	789624	9	92,106,173,89,135,112,102,84,98,	0,2452,4480,5549,5830,6501,11166,11677,11903,
#Deleted in new
chr9	135788988	135793146	chr9:135788988-135793146	0	+	135788988	135788988	8553170	2	2893,1106,	0,3052,
#Partially deleted in new
chr9	135808486	135907224	chr9:135808486-135907224	3	-	135811308	135907159	0	17	3125,119,116,103,209,137,2422,85,92,178,97,140,142,81,162,263,225,	0,6610,7403,9490,9921,10523,12352,15463,16302,18920,41650,41835,53980,57969,73146,74329,98513,
#Partially deleted in new
chr9	135809580	135882897	chr9:135809580-135882897	1	-	135811308	135850435	0	15	2031,119,116,103,209,137,2422,85,92,178,97,140,81,162,82,	0,5516,6309,8396,8827,9429,11258,14369,15208,17826,40556,40741,56875,72052,73235,
#Partially deleted in new
chr9	135810422	135826409	chr9:135810422-135826409	0	-	135810422	135810422	8553170	11	258,516,119,116,103,209,137,2422,85,92,285,	0,673,4674,5467,7554,7985,8587,10416,13527,14366,15702,
#Partially deleted in new
chr9	135810489	135907228	chr9:135810489-135907228	1	-	135811308	135907159	0	18	1122,119,116,103,209,137,2422,85,92,178,97,140,142,33,81,162,263,229,	0,4607,5400,7487,7918,8520,10349,13460,14299,16917,39647,39832,51977,54842,55966,71143,72326,96510,
#Partially deleted in new
chr9	135811512	135818647	chr9:135811512-135818647	0	-	135811512	135811512	8553170	5	99,119,116,103,240,	0,3584,4377,6464,6895,
#Partially deleted in new
chr9	135811514	135818171	chr9:135811514-135818171	0	-	135811514	135811514	8553170	3	97,119,195,	0,3582,6462,
#Deleted in new
chr9	135817787	135819066	chr9:135817787-135819066	0	-	135817787	135817787	8553170	4	60,103,209,57,	0,189,620,1222,
#Partially deleted in new
chr9	135849856	135862561	chr9:135849856-135862561	0	-	135849856	135849856	8553170	3	377,140,95,	0,465,12610,
#Partially deleted in new
chr9	135865247	135881718	chr9:135865247-135881718	0	-	135865247	135865247	8553170	3	117,81,86,	0,1208,16385,
#Partially deleted in new
chr9	135866378	135882866	chr9:135866378-135882866	0	-	135866378	135866378	8553170	3	158,162,51,	0,15254,16437,
#Partially deleted in new
chr9	135907811	135913513	chr9:135907811-135913513	3	+	135907811	135907811	8553170	3	64,137,110,	0,840,5592,
#Partially deleted in new
chr9	135932968	135961380	chr9:135932968-135961380	3	-	135933399	135961162	0	10	547,139,87,223,109,103,108,74,121,356,	0,5253,6704,12059,12920,13300,14829,20711,22326,28056,
#Partially deleted in new
chr9	135933041	135945063	chr9:135933041-135945063	0	-	135933041	135933041	8553170	5	474,139,87,128,36,	0,5180,6631,9120,11986,
#Partially deleted in new
chr9	135938339	135945673	chr9:135938339-135945673	0	-	135938339	135938339	8553170	4	21,87,128,646,	0,1333,3822,6688,
#Partially deleted in new
chr9	135939731	135948044	chr9:135939731-135948044	0	-	135939731	135939731	8553170	6	28,128,223,109,103,247,	0,2430,5296,6157,6537,8066,
#Partially deleted in new
chr9	135947515	135961212	chr9:135947515-135961212	0	-	135947515	135947515	8553170	4	390,74,121,188,	0,6164,7779,13509,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	135947876	135953893	chr9:135947876-135953893	0	-	135947876	135947876	8553170	2	29,214,	0,5803,
#Partially deleted in new
chr9	136006536	136095285	chr9:136006536-136095285	3	-	136011515	136050521	789624	6	5488,98,106,165,945,97,	0,6662,7327,9728,43099,88652,
#Partially deleted in new
chr9	136006536	136050580	chr9:136006536-136050580	1	-	136011515	136050521	789624	5	5488,98,106,165,945,	0,6662,7327,9728,43099,
#Deleted in new
chr9	136016290	136019480	chr9:136016290-136019480	0	-	136016290	136016290	8553170	2	139,313,	0,2877,
#Deleted in new
chr9	136107807	136109081	chr9:136107807-136109081	1	-	136107807	136107807	8553170	1	1274,	0,
#Deleted in new
chr9	136108104	136109424	chr9:136108104-136109424	3	-	136108104	136108104	8553170	2	715,60,	0,1260,
#Deleted in new
chr9	136114580	136118863	chr9:136114580-136118863	3	-	136116480	136116900	789624	2	2444,379,	0,3904,
#Deleted in new
chr9	136114580	136118431	chr9:136114580-136118431	1	-	136116480	136116900	789624	2	2444,360,	0,3491,
#Deleted in new
chr9	136114588	136118534	chr9:136114588-136118534	0	-	136116480	136116900	789624	3	362,1569,50,	0,867,3896,
#Deleted in new
chr9	136116785	136118274	chr9:136116785-136118274	0	-	136116785	136116900	789624	2	239,409,	0,1080,
#Deleted in new
chr9	136116803	136118438	chr9:136116803-136118438	0	-	136116803	136116900	789624	2	221,367,	0,1268,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	136122520	136124363	chr9:136122520-136124363	3	+	136122520	136122520	8553170	1	1843,	0,
#Deleted in new
chr9	136196249	136203173	chr9:136196249-136203173	3	-	136197324	136203039	789624	6	1494,169,152,203,172,228,	0,2402,2658,3428,4332,6696,
#Deleted in new
chr9	136196249	136205128	chr9:136196249-136205128	1	-	136197324	136205012	789624	6	1494,169,152,203,172,195,	0,2402,2658,3428,4332,8684,
#Deleted in new
chr9	136196251	136201674	chr9:136196251-136201674	1	-	136197324	136201210	789624	6	1492,169,152,203,172,510,	0,2400,2656,3426,4330,4913,
#Deleted in new
chr9	136196251	136203148	chr9:136196251-136203148	0	-	136196251	136196251	8553170	5	1492,169,152,1076,203,	0,2400,2656,3426,6694,
#Partially deleted in new
chr9	136206332	136245841	chr9:136206332-136245841	3	-	136208727	136245803	789624	12	2943,189,151,123,130,135,146,91,106,49,101,366,	0,4931,8821,10267,12346,12697,15463,17430,17674,18528,20441,39143,
#Partially deleted in new
chr9	136211263	136224877	chr9:136211263-136224877	0	-	136211263	136224877	789624	7	189,151,123,130,135,106,17,	0,3890,5336,7415,7766,12743,13597,
#Partially deleted in new
chr9	136249970	136304099	chr9:136249970-136304099	1	-	136253593	136303830	789624	26	5164,77,113,137,70,86,146,152,177,88,128,77,92,125,108,77,113,94,611,95,1160,135,108,99,482,412,	0,5686,6240,6734,8961,9392,10148,12340,13651,15985,17413,18078,24687,24912,26223,26680,31580,35542,36114,39988,40515,42190,47743,50249,52841,53717,
#Deleted in new
chr9	136249977	136251205	chr9:136249977-136251205	3	+	136249977	136249977	8553170	1	1228,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	136263924	136267237	chr9:136263924-136267237	3	+	136263924	136263924	8553170	2	330,1664,	0,1649,
#Partially deleted in new
chr9	136280941	136304099	chr9:136280941-136304099	1	-	136281398	136303830	789624	10	722,94,611,95,1160,135,108,99,482,412,	0,4571,5143,9017,9544,11219,16772,19278,21870,22746,
#Partially deleted in new
chr9	136281379	136306901	chr9:136281379-136306901	3	-	136281398	136303142	789624	10	284,94,611,95,1160,135,108,99,482,90,	0,4133,4705,8579,9106,10781,16334,18840,21432,25432,
#Partially deleted in new
chr9	136281384	136304070	chr9:136281384-136304070	0	-	136285674	136303830	789624	10	279,191,611,95,1160,135,108,99,482,383,	0,4128,4700,8574,9101,10776,16329,18835,21427,22303,
#Partially deleted in new
chr9	136295851	136304094	chr9:136295851-136304094	0	-	136295851	136295851	8553170	5	706,108,99,482,407,	0,1862,4368,6960,7836,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	136322302	136327323	chr9:136322302-136327323	3	-	136322302	136322302	789624	1	5021,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	136322302	136325218	chr9:136322302-136325218	0	-	136322302	136322302	8553170	1	2916,	0,
#Partially deleted in new
chr9	136327475	136359605	chr9:136327475-136359605	3	+	136327695	136358220	789624	14	288,222,136,152,124,116,156,109,124,71,177,157,209,1592,	0,6971,8490,9445,9965,10370,11079,12231,13394,21221,22111,28214,28866,30538,
#Partially deleted in new
chr9	136327475	136341836	chr9:136327475-136341836	1	+	136327695	136341160	789624	9	288,222,136,152,124,116,156,109,967,	0,6971,8490,9445,9965,10370,11079,12231,13394,
#Partially deleted in new
chr9	136331982	136359605	chr9:136331982-136359605	1	+	136332006	136358220	789624	14	188,222,136,152,124,116,156,109,124,71,177,157,209,1592,	0,2464,3983,4938,5458,5863,6572,7724,8887,16714,17604,23707,24359,26031,
#Deleted in new
chr9	136353056	136359605	chr9:136353056-136359605	1	+	136355761	136358220	789624	4	99,157,209,1592,	0,2633,3285,4957,
#Deleted in new
chr9	136354807	136358543	chr9:136354807-136358543	1	+	136355761	136358220	789624	4	215,157,209,530,	0,882,1534,3206,
#Deleted in new
chr9	136355529	136359601	chr9:136355529-136359601	1	+	136355761	136358220	789624	3	317,209,1588,	0,812,2484,
#Deleted in new
chr9	136359479	136363719	chr9:136359479-136363719	1	-	136362054	136363714	789624	2	2701,233,	0,4007,
#Deleted in new
chr9	136361899	136363789	chr9:136361899-136363789	3	-	136362011	136363714	789624	3	281,140,303,	0,1089,1587,
#Partially deleted in new
chr9	136361902	136373644	chr9:136361902-136373644	0	-	136361902	136361902	8553170	13	278,1413,735,46,42,340,126,144,180,305,138,200,113,	0,1086,2580,4897,5313,5734,7847,8391,8619,8938,9421,9992,11629,
#Partially deleted in new
chr9	136363955	136373681	chr9:136363955-136373681	3	-	136364301	136372078	789624	13	446,77,77,46,42,192,126,144,180,305,138,200,150,	0,527,1185,2844,3260,3681,5794,6338,6566,6885,7368,7939,9576,
#Partially deleted in new
chr9	136363955	136373681	chr9:136363955-136373681	1	-	136364124	136372078	789624	13	207,7,77,46,42,192,126,144,180,305,138,200,150,	0,597,1185,2844,3260,3681,5794,6338,6566,6885,7368,7939,9576,
#Deleted in new
chr9	136363955	136367630	chr9:136363955-136367630	0	-	136363955	136363955	8553170	5	446,77,77,46,415,	0,527,1185,2844,3260,
#Partially deleted in new
chr9	136363956	136370893	chr9:136363956-136370893	0	-	136363956	136363956	8553170	5	445,2363,761,952,53,	0,526,3259,5793,6884,
#Partially deleted in new
chr9	136364292	136373659	chr9:136364292-136373659	0	-	136367952	136372078	789624	13	109,77,77,46,42,340,126,144,180,305,138,200,128,	0,190,848,2507,2923,3344,5457,6001,6229,6548,7031,7602,9239,
#Deleted in new
chr9	136370593	136373646	chr9:136370593-136373646	0	-	136370593	136370593	8553170	4	552,138,200,115,	0,730,1301,2938,
#Deleted in new
chr9	136370933	136373644	chr9:136370933-136373644	0	-	136370933	136371333	789624	4	212,138,76,113,	0,390,961,2598,
#Partially deleted in new
chr9	136375576	136398797	chr9:136375576-136398797	3	-	136376355	136398428	789624	23	224,133,1757,28,111,71,250,84,483,80,95,95,107,148,165,73,105,82,79,126,168,47,499,	0,772,1966,4260,5163,5745,6247,6676,7609,8376,9143,11908,12165,12867,16365,16945,17096,18672,19223,19721,20026,21400,22722,
#Partially deleted in new
chr9	136384785	136400168	chr9:136384785-136400168	0	-	136384785	136398428	789624	14	29,95,107,148,165,73,105,82,79,126,168,47,139,35,	0,2699,2956,3658,7156,7736,7887,9463,10014,10512,10817,12191,13513,15348,
#Partially deleted in new
chr9	136401921	136410527	chr9:136401921-136410527	1	-	136402787	136410397	789624	10	966,140,63,112,74,417,113,69,150,200,	0,2133,2709,3169,3983,5223,5904,7077,8168,8406,
#Partially deleted in new
chr9	136401924	136410609	chr9:136401924-136410609	3	-	136402787	136410397	789624	9	963,140,63,112,74,417,113,150,282,	0,2130,2706,3166,3980,5220,5901,8165,8403,
#Partially deleted in new
chr9	136401950	136410600	chr9:136401950-136410600	1	-	136402787	136410397	789624	8	937,140,63,112,74,417,113,273,	0,2104,2680,3140,3954,5194,5875,8377,
#Deleted in new
chr9	136402479	136405348	chr9:136402479-136405348	0	-	136402479	136402479	8553170	4	408,140,63,258,	0,1575,2151,2611,
#Deleted in new
chr9	136402643	136404108	chr9:136402643-136404108	0	-	136402643	136402643	8553170	2	244,96,	0,1369,
#Partially deleted in new
chr9	136402664	136407185	chr9:136402664-136407185	0	-	136402787	136407185	789624	6	223,140,63,85,74,41,	0,1390,1966,2453,3240,4480,
#Deleted in new
chr9	136402681	136404780	chr9:136402681-136404780	0	-	136402681	136402681	8553170	3	206,140,150,	0,1373,1949,
#Partially deleted in new
chr9	136404109	136407208	chr9:136404109-136407208	0	-	136404109	136404109	8553170	5	85,63,85,74,263,	0,521,1008,1795,2836,
#Deleted in new
chr9	136407016	136407966	chr9:136407016-136407966	0	-	136407016	136407016	8553170	2	545,141,	0,809,
#Partially deleted in new
chr9	136407144	136410593	chr9:136407144-136410593	0	-	136407144	136410397	789624	4	417,113,69,266,	0,681,1854,3183,
#Partially deleted in new
chr9	136407874	136410268	chr9:136407874-136410268	0	-	136407874	136410135	789624	2	64,395,	0,1999,
#Partially deleted in new
chr9	136410569	136423761	chr9:136410569-136423761	3	+	136410668	136423264	789624	13	170,203,80,83,95,101,264,93,119,91,63,145,667,	0,1427,1920,2240,3983,5721,6381,7447,7985,8258,8474,11262,12525,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	136410640	136416904	chr9:136410640-136416904	0	+	136410640	136410640	8553170	6	99,203,80,83,95,614,	0,1356,1849,2169,3912,5650,
#Deleted in new
chr9	136410643	136412606	chr9:136410643-136412606	0	+	136410643	136410643	8553170	3	96,203,117,	0,1353,1846,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	136410657	136416555	chr9:136410657-136416555	0	+	136410657	136410657	8553170	5	82,203,80,83,265,	0,1339,1832,2152,5633,
#Deleted in new
chr9	136410657	136412504	chr9:136410657-136412504	0	+	136410657	136410657	8553170	2	82,508,	0,1339,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	136410659	136416845	chr9:136410659-136416845	0	+	136410659	136410659	8553170	5	80,203,80,95,555,	0,1337,1830,3893,5631,
#Partially deleted in new
chr9	136410660	136423760	chr9:136410660-136423760	1	+	136412513	136423264	789624	12	79,203,80,83,101,264,93,119,91,63,145,666,	0,1336,1829,2149,5630,6290,7356,7894,8167,8383,11171,12434,
#Deleted in new
chr9	136410673	136412965	chr9:136410673-136412965	0	+	136410673	136410673	8553170	4	66,203,80,156,	0,1323,1816,2136,
#Partially deleted in new
chr9	136411117	136416297	chr9:136411117-136416297	0	+	136411117	136411117	8553170	6	288,203,80,83,95,7,	0,879,1372,1692,3435,5173,
#Partially deleted in new
chr9	136412171	136417195	chr9:136412171-136417195	0	+	136412171	136412171	8553170	6	28,80,83,95,101,196,	0,318,638,2381,4119,4828,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	136416066	136420933	chr9:136416066-136420933	0	+	136416066	136416066	8553170	5	1148,93,119,91,1890,	0,1950,2488,2761,2977,
#Partially deleted in new
chr9	136417193	136423760	chr9:136417193-136423760	0	+	136417193	136422260	789624	6	21,93,119,91,63,1929,	0,823,1361,1634,1850,4638,
#Partially deleted in new
chr9	136428618	136439822	chr9:136428618-136439822	3	-	136429674	136439419	0	10	1189,137,116,162,108,120,125,98,124,1215,	0,1658,2383,3205,3860,4337,4536,5418,6121,9989,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	136435512	136439823	chr9:136435512-136439823	0	-	136435512	136435512	8553170	1	4311,	0,
#Partially deleted in new
chr9	136440095	136444082	chr9:136440095-136444082	0	-	136440095	136440095	8553170	2	1728,260,	0,3727,
#Partially deleted in new
chr9	136440096	136483759	chr9:136440096-136483759	1	-	136441754	136477615	789624	29	1727,78,161,138,112,57,78,153,83,219,193,114,141,106,112,118,82,98,246,139,62,143,175,199,127,98,137,3636,250,	0,3726,6758,7130,7472,7756,7987,11159,13331,14012,15504,15956,17347,19037,19347,19660,19945,21080,22790,23366,23582,24323,25865,26167,26860,28318,31878,33952,43413,
#Partially deleted in new
chr9	136440096	136477689	chr9:136440096-136477689	3	-	136441754	136477615	789624	30	1727,78,60,75,95,138,112,57,78,153,83,219,193,114,141,106,112,118,82,98,246,139,62,143,175,199,127,98,137,3641,	0,3726,4955,5548,6758,7130,7472,7756,7987,11159,13331,14012,15504,15956,17347,19037,19347,19660,19945,21080,22790,23366,23582,24323,25865,26167,26860,28318,31878,33952,
#Partially deleted in new
chr9	136440100	136462961	chr9:136440100-136462961	0	-	136441754	136462961	789624	21	1723,78,60,75,95,138,112,57,78,153,83,219,193,114,141,106,112,118,82,98,75,	0,3722,4951,5544,6754,7126,7468,7752,7983,11155,13327,14008,15500,15952,17343,19033,19343,19656,19941,21076,22786,
#Partially deleted in new
chr9	136440100	136477115	chr9:136440100-136477115	1	-	136441754	136477081	789624	28	1723,78,95,138,112,57,78,153,83,219,193,114,141,106,112,118,82,98,246,139,62,143,175,199,127,98,137,3067,	0,3722,6754,7126,7468,7752,7983,11155,13327,14008,15500,15952,17343,19033,19343,19656,19941,21076,22786,23362,23578,24319,25861,26163,26856,28314,31874,33948,
#Partially deleted in new
chr9	136440100	136467051	chr9:136440100-136467051	0	-	136441754	136467051	789624	26	1723,78,75,95,138,112,57,78,153,83,219,193,114,141,106,112,118,82,98,246,139,62,143,175,199,95,	0,3722,5544,6754,7126,7468,7752,7983,11155,13327,14008,15500,15952,17343,19033,19343,19656,19941,21076,22786,23362,23578,24319,25861,26163,26856,
#Partially deleted in new
chr9	136440102	136448842	chr9:136440102-136448842	1	-	136441754	136448579	789624	10	1721,78,60,75,161,138,112,57,78,593,	0,3720,4949,5542,6752,7124,7466,7750,7981,8147,
#Partially deleted in new
chr9	136441754	136477081	chr9:136441754-136477081	1	-	136441754	136477081	789624	29	69,78,60,95,138,112,57,78,153,83,219,193,114,141,106,112,118,82,98,246,139,62,143,175,199,127,98,137,3033,	0,2068,3297,5100,5472,5814,6098,6329,9501,11673,12354,13846,14298,15689,17379,17689,18002,18287,19422,21132,21708,21924,22665,24207,24509,25202,26660,30220,32294,
#Partially deleted in new
chr9	136462942	136466046	chr9:136462942-136466046	0	-	136462942	136462942	8553170	4	190,155,107,85,	0,643,1477,3019,
#Deleted in new
chr9	136483494	136486066	chr9:136483494-136486066	0	+	136483494	136483494	8553170	1	2572,	0,
#Deleted in new
chr9	136483494	136486067	chr9:136483494-136486067	3	+	136483494	136483494	8553170	1	2573,	0,
#Partially deleted in new
chr9	136494432	136545786	chr9:136494432-136545786	3	-	136496070	136545786	0	34	3126,98,148,296,166,88,217,149,432,572,113,258,133,185,154,202,229,153,120,114,146,193,111,234,114,114,186,156,234,123,339,263,79,61,	0,4466,4679,6119,7315,7568,7839,8749,10240,10877,12094,12283,12872,13522,13799,14437,15300,16220,16719,18588,18959,20077,20857,21050,21548,22839,23319,23704,24158,25010,28417,29284,49591,51293,
#Partially deleted in new
chr9	136502436	136513551	chr9:136502436-136513551	0	-	136502436	136502436	8553170	14	894,432,572,113,258,133,185,154,202,229,153,120,114,160,	0,2236,2873,4090,4279,4868,5518,5795,6433,7296,8216,8715,10584,10955,
#Partially deleted in new
chr9	136502445	136504845	chr9:136502445-136504845	0	-	136502445	136502445	8553170	3	330,149,173,	0,736,2227,
#Deleted in new
chr9	136510510	136513110	chr9:136510510-136513110	0	-	136510510	136510510	8553170	3	295,120,90,	0,641,2510,
#Deleted in new
chr9	136519567	136519626	chr9:136519567-136519626	3	-	136519567	136519567	5263520	1	59,	0,
#Deleted in new
chr9	136522627	136523898	chr9:136522627-136523898	0	-	136522627	136522627	8553170	2	561,182,	0,1089,
#Deleted in new
chr9	136542880	136543835	chr9:136542880-136543835	3	+	136542880	136542880	8553170	2	158,706,	0,249,
#Deleted in new
chr9	136546172	136546259	chr9:136546172-136546259	3	-	136546172	136546172	5263520	1	87,	0,
#Deleted in new
chr9	136546211	136549449	chr9:136546211-136549449	3	+	136546211	136546211	8553170	3	160,260,318,	0,1630,2920,
#Deleted in new
chr9	136549129	136549893	chr9:136549129-136549893	1	+	136549129	136549129	8553170	2	89,348,	0,416,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	136612023	136615637	chr9:136612023-136615637	0	-	136612023	136612023	8553170	4	147,201,169,277,	0,679,3071,3337,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	136612027	136617181	chr9:136612027-136617181	0	-	136612027	136612027	789624	3	143,201,3058,	0,675,2096,
#Deleted in new
chr9	136616311	136616846	chr9:136616311-136616846	7	-	136616311	136616311	16724991	2	471,63,	0,472,
#Partially deleted in new
chr9	136648609	136660421	chr9:136648609-136660421	3	-	136648609	136648609	789624	2	456,101,	0,11711,
#Partially deleted in new
chr9	136658855	136672678	chr9:136658855-136672678	3	+	136668282	136672286	789624	10	775,94,122,117,116,96,162,65,163,415,	0,5836,9385,9701,10750,11058,11313,12094,13070,13408,
#Deleted in new
chr9	136662926	136672677	chr9:136662926-136672677	1	+	136668282	136672286	789624	11	182,216,94,122,117,116,96,162,65,163,414,	0,481,1765,5314,5630,6679,6987,7242,8023,8999,9337,
#Deleted in new
chr9	136662929	136672678	chr9:136662929-136672678	1	+	136668282	136672286	789624	10	179,94,122,117,116,96,162,65,163,415,	0,1762,5311,5627,6676,6984,7239,8020,8996,9334,
#Deleted in new
chr9	136662931	136668673	chr9:136662931-136668673	0	+	136668282	136668673	789624	5	177,216,91,122,117,	0,476,1763,5309,5625,
#Deleted in new
chr9	136662932	136669674	chr9:136662932-136669674	0	+	136662932	136662932	8553170	4	176,94,117,69,	0,1759,5624,6673,
#Deleted in new
chr9	136665787	136671993	chr9:136665787-136671993	0	+	136665787	136665787	8553170	7	30,117,116,96,162,65,68,	0,2769,3818,4126,4381,5162,6138,
#Deleted in new
chr9	136665791	136672678	chr9:136665791-136672678	1	+	136668282	136672286	789624	9	26,122,117,116,96,162,65,163,415,	0,2449,2765,3814,4122,4377,5158,6134,6472,
#Deleted in new
chr9	136670601	136670686	chr9:136670601-136670686	3	+	136670601	136670601	5263520	1	85,	0,
#Partially deleted in new
chr9	136673142	136687398	chr9:136673142-136687398	1	-	136673751	136687357	789624	5	785,73,176,134,223,	0,1592,3818,4280,14033,
#Partially deleted in new
chr9	136673142	136687423	chr9:136673142-136687423	3	-	136673751	136687357	789624	6	785,73,96,176,134,248,	0,1592,3442,3818,4280,14033,
#Partially deleted in new
chr9	136673149	136687396	chr9:136673149-136687396	1	-	136673751	136687357	789624	7	129,528,73,96,176,134,221,	0,250,1585,3435,3811,4273,14026,
#Deleted in new
chr9	136673708	136677380	chr9:136673708-136677380	0	-	136673708	136673708	8553170	4	219,73,96,420,	0,1026,2876,3252,
#Partially deleted in new
chr9	136677026	136687365	chr9:136677026-136687365	0	-	136677026	136677026	8553170	2	530,190,	0,10149,
#Partially deleted in new
chr9	136712569	136724050	chr9:136712569-136724050	3	+	136712665	136723774	789624	5	159,135,108,177,1089,	0,5007,9351,9555,10392,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	136720884	136724050	chr9:136720884-136724050	1	+	136721983	136723774	789624	3	1144,177,1089,	0,1240,2077,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	136721365	136728184	chr9:136721365-136728184	3	-	136721365	136721365	8553170	6	1746,104,56,106,41,304,	0,2531,3689,4945,5680,6515,
#Partially deleted in new
chr9	136724657	136728184	chr9:136724657-136728184	0	-	136724657	136724657	789624	5	282,56,106,41,304,	0,397,1653,2388,3223,
#Partially deleted in new
chr9	136724659	136726483	chr9:136724659-136726483	1	-	136724659	136724659	8553170	3	280,56,173,	0,395,1651,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	136725233	136728184	chr9:136725233-136728184	1	-	136725233	136725233	789624	2	1853,304,	0,2647,
#Deleted in new
chr9	136726103	136726239	chr9:136726103-136726239	3	-	136726103	136726103	5263520	1	136,	0,
#Deleted in new
chr9	136726104	136726234	chr9:136726104-136726234	3	-	136726104	136726104	8553170	1	130,	0,
#Deleted in new
chr9	136726746	136726879	chr9:136726746-136726879	3	-	136726746	136726746	5263520	1	133,	0,
#Deleted in new
chr9	136726747	136726879	chr9:136726747-136726879	3	-	136726747	136726747	8553170	1	132,	0,
#Deleted in new
chr9	136728952	136729855	chr9:136728952-136729855	7	-	136728952	136728952	16724991	3	159,93,159,	0,354,744,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	136738166	136742940	chr9:136738166-136742940	0	-	136740044	136742903	789624	4	1387,99,140,154,	0,1783,3714,4620,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	136738166	136743356	chr9:136738166-136743356	0	-	136738166	136738166	8553170	6	1387,99,108,110,82,1476,	0,1783,2669,3085,3489,3714,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chr9	136738166	136748453	chr9:136738166-136748453	3	-	136744661	136748453	789624	11	1387,99,108,140,176,26,102,111,71,140,60,	0,1783,2669,3714,4620,6172,6473,7003,7677,9257,10227,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	136738166	136742004	chr9:136738166-136742004	0	-	136738166	136738166	8553170	3	1387,994,124,	0,1783,3714,
#Deleted in new
chr9	136739460	136742959	chr9:136739460-136742959	3	-	136739524	136742903	789624	6	93,99,108,110,140,173,	0,489,1375,1791,2420,3326,
#Deleted in new
chr9	136739460	136742959	chr9:136739460-136742959	1	-	136739524	136742903	789624	5	93,99,110,140,173,	0,489,1791,2420,3326,
#Deleted in new
chr9	136739460	136742959	chr9:136739460-136742959	0	-	136740015	136742903	789624	4	93,99,78,173,	0,489,2420,3326,
#Deleted in new
chr9	136739523	136741988	chr9:136739523-136741988	0	-	136741876	136741988	789624	4	30,99,108,333,	0,426,1312,2132,
#Deleted in new
chr9	136739524	136742903	chr9:136739524-136742903	1	-	136739524	136742903	789624	5	29,99,179,140,117,	0,425,1311,2356,3262,
#Deleted in new
chr9	136741880	136745853	chr9:136741880-136745853	0	-	136741880	136741880	8553170	5	78,26,102,111,241,	0,2458,2759,3289,3732,
#Deleted in new
chr9	136744010	136748528	chr9:136744010-136748528	3	-	136744661	136748483	789624	7	132,26,102,111,71,140,135,	0,328,629,1159,1833,3413,4383,
#Deleted in new
chr9	136744016	136746022	chr9:136744016-136746022	1	-	136744661	136745889	789624	3	725,111,179,	0,1153,1827,
#Deleted in new
chr9	136744066	136745852	chr9:136744066-136745852	0	-	136744066	136744066	8553170	5	76,26,102,111,279,	0,272,573,1103,1507,
#Deleted in new
chr9	136744068	136745851	chr9:136744068-136745851	0	-	136744068	136744068	8553170	5	74,26,102,111,218,	0,270,571,1101,1565,
#Deleted in new
chr9	136744077	136745851	chr9:136744077-136745851	0	-	136744077	136744077	8553170	5	65,26,102,111,239,	0,261,562,1092,1535,
#Deleted in new
chr9	136744716	136745849	chr9:136744716-136745849	0	-	136744716	136744716	8553170	3	25,111,391,	0,453,742,
#Deleted in new
chr9	136746892	136746970	chr9:136746892-136746970	3	-	136746892	136746892	5263520	1	78,	0,
#Deleted in new
chr9	136754385	136758226	chr9:136754385-136758226	3	-	136754497	136757930	789624	7	124,26,90,105,71,131,320,	0,749,858,1026,2136,2652,3521,
#Deleted in new
chr9	136754385	136757457	chr9:136754385-136757457	0	-	136754385	136754385	8553170	6	124,26,90,238,71,420,	0,749,858,1026,2136,2652,
#Deleted in new
chr9	136754385	136757055	chr9:136754385-136757055	0	-	136754385	136754385	8553170	5	124,26,273,71,18,	0,749,858,2136,2652,
#Deleted in new
chr9	136754385	136757538	chr9:136754385-136757538	0	-	136754385	136754385	8553170	3	775,1349,501,	0,858,2652,
#Deleted in new
chr9	136754387	136758543	chr9:136754387-136758543	1	-	136754497	136758543	789624	7	122,26,90,105,71,131,93,	0,747,856,1024,2134,2650,4063,
#Partially deleted in new
chr9	136759633	136764513	chr9:136759633-136764513	3	-	136761818	136764488	0	7	150,67,102,111,71,140,121,	0,2153,2554,3723,4079,4236,4759,
#Partially deleted in new
chr9	136759633	136764464	chr9:136759633-136764464	0	-	136759633	136759633	8553170	4	81,40,96,72,	0,4110,4236,4759,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	136759635	136766255	chr9:136759635-136766255	0	-	136759635	136759635	8553170	6	148,67,102,111,71,2386,	0,2151,2552,3721,4077,4234,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	136779938	136780218	chr9:136779938-136780218	7	+	136779938	136779938	16724991	1	280,	0,
#Deleted in new
chr9	136791354	136793257	chr9:136791354-136793257	3	+	136791370	136792832	0	5	70,67,84,108,439,	0,356,592,896,1464,
#Deleted in new
chr9	136791367	136793256	chr9:136791367-136793256	0	+	136791367	136791367	8553170	5	57,152,84,108,438,	0,258,579,883,1451,
#Deleted in new
chr9	136791371	136793256	chr9:136791371-136793256	0	+	136791371	136791371	8553170	4	53,84,108,438,	0,575,879,1447,
#Partially deleted in new
chr9	136791378	136800595	chr9:136791378-136800595	3	+	136791378	136792021	789624	6	46,84,108,122,168,207,	0,568,872,7723,8623,9010,
#Deleted in new
chr9	136791378	136792902	chr9:136791378-136792902	0	+	136791378	136791378	8553170	4	46,253,108,84,	0,399,872,1440,
#Deleted in new
chr9	136791390	136792346	chr9:136791390-136792346	0	+	136791390	136791390	8553170	3	387,84,96,	0,556,860,
#Deleted in new
chr9	136791403	136792869	chr9:136791403-136792869	0	+	136791403	136791403	8553170	4	21,67,412,51,	0,307,543,1415,
#Partially deleted in new
chr9	136796349	136807741	chr9:136796349-136807741	0	+	136796397	136806088	789624	13	118,122,78,168,105,123,124,55,101,161,364,97,170,	0,2752,3363,3652,4039,6314,8154,8412,9007,9728,10154,10620,11222,
#Partially deleted in new
chr9	136796359	136806528	chr9:136796359-136806528	0	+	136796359	136796359	8553170	10	108,122,78,168,105,123,126,55,101,451,	0,2742,3353,3642,4029,6304,8142,8402,8997,9718,
#Partially deleted in new
chr9	136796362	136807721	chr9:136796362-136807721	3	+	136796397	136807690	789624	14	105,122,78,168,105,123,126,55,101,161,169,111,97,150,	0,2739,3350,3639,4026,6301,8139,8399,8994,9715,10141,10394,10607,11209,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	136799222	136810035	chr9:136799222-136810035	3	+	136799222	136799222	8553170	10	568,168,105,123,126,55,595,111,97,2296,	0,779,1166,3441,5279,5539,6855,7534,7747,8517,
#Partially deleted in new
chr9	136799414	136807740	chr9:136799414-136807740	0	+	136799414	136799414	8553170	9	755,105,123,126,55,101,790,97,169,	0,974,3249,5087,5347,5942,6663,7555,8157,
#Deleted in new
chr9	136799886	136800749	chr9:136799886-136800749	0	+	136799886	136799886	8553170	2	283,361,	0,502,
#Partially deleted in new
chr9	136800314	136807740	chr9:136800314-136807740	0	+	136800314	136800314	8553170	9	179,123,126,55,101,595,111,97,169,	0,2349,4187,4447,5042,5763,6442,6655,7257,
#Partially deleted in new
chr9	136800365	136829466	chr9:136800365-136829466	3	+	136800365	136800365	8553170	6	128,123,135,48,53,74,	0,2298,23159,25413,28128,29027,
#Partially deleted in new
chr9	136803926	136808848	chr9:136803926-136808848	3	-	136803926	136803926	789624	5	1658,79,153,374,122,	0,2123,2458,2902,4800,
#Partially deleted in new
chr9	136805361	136807681	chr9:136805361-136807681	0	+	136805361	136805361	8553170	6	96,161,169,111,97,110,	0,716,1142,1395,1608,2210,
#Partially deleted in new
chr9	136806181	136810042	chr9:136806181-136810042	0	+	136806181	136806181	8553170	5	686,97,587,175,355,	0,788,1558,3073,3506,
#Deleted in new
chr9	136806784	136807741	chr9:136806784-136807741	0	+	136806784	136806784	8553170	4	83,97,72,170,	0,185,496,787,
#Partially deleted in new
chr9	136807942	136834340	chr9:136807942-136834340	1	+	136808196	136833959	789624	8	384,135,48,53,92,141,106,621,	0,15582,17836,20551,21450,23778,24322,25777,
#Partially deleted in new
chr9	136807960	136841187	chr9:136807960-136841187	3	+	136808196	136840522	789624	15	366,135,48,53,92,141,106,104,317,154,213,265,172,59,866,	0,15564,17818,20533,21432,23760,24304,27781,29385,29901,30948,31261,31733,32193,32361,
#Partially deleted in new
chr9	136807960	136841182	chr9:136807960-136841182	0	+	136808196	136839730	789624	14	366,135,48,53,92,141,106,104,317,119,173,172,59,861,	0,15564,17818,20533,21432,23760,24304,27781,29385,29901,31353,31733,32193,32361,
#Partially deleted in new
chr9	136807966	136841177	chr9:136807966-136841177	1	+	136808196	136840522	789624	15	360,135,48,53,92,141,109,104,317,154,213,265,172,59,856,	0,15558,17812,20527,21426,23754,24295,27775,29379,29895,30942,31255,31727,32187,32355,
#Partially deleted in new
chr9	136808158	136841187	chr9:136808158-136841187	1	+	136808196	136840968	789624	10	168,135,48,53,92,141,106,104,270,703,	0,15366,17620,20335,21234,23562,24106,27583,29187,32326,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	136812787	136815536	chr9:136812787-136815536	7	-	136812787	136812787	16724991	4	838,256,61,808,	0,1149,1704,1941,
#Partially deleted in new
chr9	136821328	136841187	chr9:136821328-136841187	0	+	136822040	136839350	789624	15	728,135,48,53,92,141,106,104,317,154,213,173,172,59,866,	0,2196,4450,7165,8064,10392,10936,14413,16017,16533,17580,17985,18365,18825,18993,
#Partially deleted in new
chr9	136822040	136839350	chr9:136822040-136839350	1	+	136822040	136839350	789624	12	16,135,48,53,92,141,106,104,317,154,213,37,	0,1484,3738,6453,7352,9680,10224,13701,15305,15821,16868,17273,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	136823525	136834340	chr9:136823525-136834340	0	+	136823525	136832439	789624	6	134,48,53,92,141,2079,	0,2253,4968,5867,8195,8736,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	136826596	136836998	chr9:136826596-136836998	0	+	136826596	136826596	8553170	4	1950,92,650,1257,	0,2796,5124,9145,
#Partially deleted in new
chr9	136828471	136837590	chr9:136828471-136837590	0	+	136828471	136828471	8553170	6	75,92,141,106,104,245,	0,921,3249,3793,7270,8874,
#Deleted in new
chr9	136830956	136831023	chr9:136830956-136831023	3	+	136830956	136830956	5263520	1	67,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	136835170	136840185	chr9:136835170-136840185	0	+	136835170	136835170	8553170	6	2492,154,213,265,172,32,	0,2691,3738,4051,4523,4983,
#Deleted in new
chr9	136844414	136848801	chr9:136844414-136848801	3	+	136844414	136847345	789624	1	4387,	0,
#Deleted in new
chr9	136848723	136851022	chr9:136848723-136851022	1	+	136849430	136850789	0	5	57,480,125,55,268,	0,387,1289,1782,2031,
#Deleted in new
chr9	136849090	136851022	chr9:136849090-136851022	0	+	136849090	136849090	789624	3	500,548,268,	0,922,1664,
#Deleted in new
chr9	136849093	136851022	chr9:136849093-136851022	3	+	136849430	136850847	0	3	497,125,268,	0,919,1661,
#Deleted in new
chr9	136849424	136851024	chr9:136849424-136851024	0	+	136849424	136849424	8553170	4	166,125,58,270,	0,588,1078,1330,
#Deleted in new
chr9	136849425	136851027	chr9:136849425-136851027	0	+	136849425	136849425	8553170	4	165,125,55,273,	0,587,1080,1329,
#Deleted in new
chr9	136849778	136851022	chr9:136849778-136851022	0	+	136849778	136849778	8553170	2	359,268,	0,976,
#Partially deleted in new
chr9	136850942	136860799	chr9:136850942-136860799	0	+	136850942	136850942	8553170	25	163,83,84,68,623,85,126,138,174,85,189,117,132,363,135,134,220,138,119,147,135,128,109,179,238,	0,914,1436,2199,2342,3049,3268,3596,3994,4311,4488,4789,5075,5521,5964,6222,6424,6716,7036,7457,7776,8062,8266,8943,9619,
#Partially deleted in new
chr9	136852366	136860797	chr9:136852366-136860797	3	+	136852416	136860603	789624	27	96,108,174,126,131,85,126,138,89,174,85,189,117,132,117,135,134,220,138,119,91,147,135,128,109,179,236,	0,735,918,1178,1410,1625,1844,2172,2395,2570,2887,3064,3365,3651,4343,4540,4798,5000,5292,5612,5819,6033,6352,6638,6842,7519,8195,
#Partially deleted in new
chr9	136852366	136860797	chr9:136852366-136860797	1	+	136852416	136860603	789624	29	96,108,174,126,131,85,126,138,89,174,85,189,117,132,125,112,117,135,134,220,138,119,91,147,135,128,109,179,236,	0,735,918,1178,1410,1625,1844,2172,2395,2570,2887,3064,3365,3651,3890,4097,4343,4540,4798,5000,5292,5612,5819,6033,6352,6638,6842,7519,8195,
#Deleted in new
chr9	136855558	136856219	chr9:136855558-136856219	0	+	136855558	136855558	8553170	3	61,117,202,	0,173,459,
#Partially deleted in new
chr9	136857004	136860797	chr9:136857004-136860797	0	+	136857004	136858160	789624	8	37,134,220,138,568,414,856,236,	0,160,362,654,974,1714,2204,3557,
#Partially deleted in new
chr9	136862118	136866286	chr9:136862118-136866286	3	-	136862283	136866258	0	5	227,94,161,52,106,	0,787,1169,1701,4062,
#Partially deleted in new
chr9	136862118	136866285	chr9:136862118-136866285	1	-	136862455	136866258	0	5	378,94,161,52,105,	0,787,1169,1701,4062,
#Partially deleted in new
chr9	136862489	136866266	chr9:136862489-136866266	1	-	136862870	136866258	0	4	510,161,52,86,	0,798,1330,3691,
#Partially deleted in new
chr9	136881911	136908218	chr9:136881911-136908218	0	+	136898740	136908218	789624	6	122,44,216,79,99,149,	0,755,16801,17682,18510,26158,
#Partially deleted in new
chr9	136886064	136909971	chr9:136886064-136909971	0	+	136898740	136909971	789624	6	215,216,79,99,162,52,	0,12648,13529,14357,22005,23855,
#Partially deleted in new
chr9	136886517	136926607	chr9:136886517-136926607	3	+	136898740	136925901	0	11	24,216,79,99,162,75,75,282,178,149,925,	0,12195,13076,13904,21552,23402,30023,33716,34520,37334,39165,
#Partially deleted in new
chr9	136886732	136886803	chr9:136886732-136886803	3	+	136886732	136886732	5263520	1	71,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	136889534	136900517	chr9:136889534-136900517	0	+	136898740	136900517	789624	6	28,67,194,216,79,96,	0,135,814,9178,10059,10887,
#Partially deleted in new
chr9	136900479	136910096	chr9:136900479-136910096	0	+	136900479	136900479	8553170	3	41,162,177,	0,7590,9440,
#Partially deleted in new
chr9	136901943	136920320	chr9:136901943-136920320	0	+	136901943	136901943	8553170	5	453,162,75,75,87,	0,6126,7976,14597,18290,
#Partially deleted in new
chr9	136908135	136916677	chr9:136908135-136916677	0	+	136908135	136908135	8553170	3	96,75,137,	0,1784,8405,
#Partially deleted in new
chr9	136921124	136923881	chr9:136921124-136923881	0	+	136921124	136921124	8553170	3	91,112,30,	0,1257,2727,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	136935839	136937161	chr9:136935839-136937161	7	+	136935839	136935839	16724991	1	1322,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	136937168	136937988	chr9:136937168-136937988	3	-	136937168	136937168	8553170	1	820,	0,
#Deleted in new
chr9	136940434	136944650	chr9:136940434-136944650	3	-	136940927	136944083	789624	9	737,213,148,421,149,175,158,216,57,	0,816,1102,1611,2112,2334,2914,3456,4159,
#Deleted in new
chr9	136940434	136944696	chr9:136940434-136944696	0	-	136940434	136940434	8553170	8	737,213,148,367,397,158,216,103,	0,816,1102,1665,2112,2914,3456,4159,
#Deleted in new
chr9	136940434	136944688	chr9:136940434-136944688	0	-	136940434	136940434	8553170	8	737,213,148,650,175,158,216,95,	0,816,1102,1611,2334,2914,3456,4159,
#Deleted in new
chr9	136940434	136942668	chr9:136940434-136942668	0	-	136942007	136942668	789624	5	737,213,148,712,122,	0,816,1102,1320,2112,
#Deleted in new
chr9	136941410	136944155	chr9:136941410-136944155	0	-	136941410	136941410	8553170	6	53,148,421,397,158,265,	0,126,635,1136,1938,2480,
#Deleted in new
chr9	136942546	136944620	chr9:136942546-136944620	0	-	136943000	136944083	789624	5	149,235,158,216,27,	0,222,802,1344,2047,
#Deleted in new
chr9	136942650	136944687	chr9:136942650-136944687	0	-	136942650	136944083	789624	5	45,205,158,216,94,	0,118,698,1240,1943,
#Deleted in new
chr9	136942906	136944534	chr9:136942906-136944534	0	-	136942906	136944083	789624	3	37,158,644,	0,442,984,
#Deleted in new
chr9	136945184	136945836	chr9:136945184-136945836	0	+	136945184	136945184	8553170	2	274,203,	0,449,
#Deleted in new
chr9	136945242	136946975	chr9:136945242-136946975	3	+	136945320	136946781	789624	7	216,137,71,108,102,39,208,	0,391,686,842,1222,1408,1525,
#Deleted in new
chr9	136945245	136946974	chr9:136945245-136946974	1	+	136945320	136946781	0	7	213,137,71,108,102,39,207,	0,388,683,839,1219,1405,1522,
#Deleted in new
chr9	136945245	136946361	chr9:136945245-136946361	0	+	136945245	136945245	8553170	5	213,137,71,108,38,	0,388,683,839,1078,
#Deleted in new
chr9	136945438	136946849	chr9:136945438-136946849	0	+	136945438	136946124	8553170	6	20,137,108,102,39,82,	0,195,646,1026,1212,1329,
#Deleted in new
chr9	136946138	136946974	chr9:136946138-136946974	0	+	136946138	136946507	8553170	4	54,130,39,207,	0,298,512,629,
#Deleted in new
chr9	136946433	136946974	chr9:136946433-136946974	0	+	136946433	136946433	8553170	2	133,324,	0,217,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	136949550	136953074	chr9:136949550-136953074	0	+	136949550	136949550	8553170	4	118,122,122,183,	0,1724,2769,3341,
#Partially deleted in new
chr9	136952315	136955497	chr9:136952315-136955497	0	+	136952315	136952315	8553170	5	126,137,80,117,1344,	0,576,1384,1532,1838,
#Partially deleted in new
chr9	136952327	136955399	chr9:136952327-136955399	3	+	136952327	136955399	789624	6	114,137,80,117,102,29,	0,564,1372,1520,1826,3043,
#Partially deleted in new
chr9	136952375	136954405	chr9:136952375-136954405	0	+	136952375	136952375	8553170	4	66,137,80,252,	0,516,1324,1778,
#Partially deleted in new
chr9	136952402	136955497	chr9:136952402-136955497	0	+	136952402	136952402	8553170	7	39,137,80,41,102,103,127,	0,489,1297,1521,1751,2321,2968,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	136952666	136953491	chr9:136952666-136953491	0	+	136952666	136952666	8553170	2	362,39,	0,786,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	136952891	136954455	chr9:136952891-136954455	0	+	136952891	136952891	8553170	3	137,292,302,	0,596,1262,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	136952891	136954255	chr9:136952891-136954255	0	+	136952891	136952891	8553170	3	137,314,102,	0,574,1262,
#Partially deleted in new
chr9	136952920	136954414	chr9:136952920-136954414	0	+	136952920	136952920	8553170	3	108,80,261,	0,779,1233,
#Partially deleted in new
chr9	136952951	136955497	chr9:136952951-136955497	0	+	136952951	136954773	789624	5	77,80,102,103,127,	0,748,1202,1772,2419,
#Partially deleted in new
chr9	136952975	136955497	chr9:136952975-136955497	0	+	136952975	136954252	789624	5	53,80,41,102,127,	0,724,948,1178,2395,
#Deleted in new
chr9	136953587	136955497	chr9:136953587-136955497	0	+	136953587	136953587	8553170	4	192,102,103,127,	0,566,1136,1783,
#Deleted in new
chr9	136953616	136955497	chr9:136953616-136955497	0	+	136953616	136953616	8553170	5	163,41,102,103,127,	0,307,537,1107,1754,
#Deleted in new
chr9	136953633	136955426	chr9:136953633-136955426	0	+	136953633	136953633	8553170	3	622,103,56,	0,1090,1737,
#Deleted in new
chr9	136953860	136955497	chr9:136953860-136955497	0	+	136953860	136953860	8553170	4	104,102,103,127,	0,293,863,1510,
#Partially deleted in new
chr9	136969242	136971990	chr9:136969242-136971990	3	+	136969242	136969242	8553170	4	231,174,80,493,	0,643,1721,2255,
#Deleted in new
chr9	136975091	136979021	chr9:136975091-136979021	0	+	136977578	136979021	789624	5	163,82,184,143,29,	0,303,1457,2458,3901,
#Deleted in new
chr9	136975093	136976981	chr9:136975093-136976981	0	+	136975093	136975093	8553170	3	161,92,433,	0,301,1455,
#Deleted in new
chr9	136977504	136981738	chr9:136977504-136981738	3	+	136977578	136980855	0	7	188,140,77,117,102,23,160,	0,1488,1718,2441,2678,3328,4074,
#Deleted in new
chr9	136977504	136980219	chr9:136977504-136980219	0	+	136977578	136980219	789624	5	188,140,179,117,37,	0,1488,1718,2441,2678,
#Deleted in new
chr9	136977515	136979826	chr9:136977515-136979826	0	+	136977515	136977515	8553170	3	177,140,604,	0,1477,1707,
#Deleted in new
chr9	136977517	136985435	chr9:136977517-136985435	3	+	136977578	136980855	789624	10	175,140,77,117,102,23,140,74,102,39,	0,1475,1705,2428,2665,3315,6051,6972,7518,7879,
#Deleted in new
chr9	136978811	136981692	chr9:136978811-136981692	0	+	136978811	136978811	8553170	6	321,77,117,102,23,114,	0,411,1134,1371,2021,2767,
#Deleted in new
chr9	136978842	136979548	chr9:136978842-136979548	0	+	136978842	136978842	8553170	2	290,326,	0,380,
#Deleted in new
chr9	136979079	136981737	chr9:136979079-136981737	0	+	136979079	136980836	789624	6	53,77,117,102,45,159,	0,143,866,1103,1731,2499,
#Deleted in new
chr9	136979915	136981056	chr9:136979915-136981056	0	+	136979915	136979915	8553170	2	369,224,	0,917,
#Deleted in new
chr9	136980254	136981742	chr9:136980254-136981742	0	+	136980254	136980836	789624	3	30,176,164,	0,425,1324,
#Deleted in new
chr9	136981903	136985758	chr9:136981903-136985758	0	+	136981903	136981903	8553170	2	2660,1046,	0,2809,
#Deleted in new
chr9	136982992	136985761	chr9:136982992-136985761	3	+	136983586	136985011	789624	3	716,74,1049,	0,1497,1720,
#Deleted in new
chr9	136983323	136985758	chr9:136983323-136985758	0	+	136983323	136983323	8553170	3	1240,102,362,	0,1712,2073,
#Deleted in new
chr9	136984001	136986410	chr9:136984001-136986410	0	+	136984001	136984001	8553170	3	562,776,293,	0,1034,2116,
#Deleted in new
chr9	136992417	136993976	chr9:136992417-136993976	3	+	136992443	136993805	0	7	145,61,50,191,69,85,211,	0,222,507,635,925,1162,1348,
#Deleted in new
chr9	136992441	136993412	chr9:136992441-136993412	0	+	136992441	136992441	8553170	3	533,191,70,	0,611,901,
#Deleted in new
chr9	136992446	136993881	chr9:136992446-136993881	0	+	136992446	136992446	8553170	5	116,319,69,85,116,	0,478,896,1133,1319,
#Deleted in new
chr9	136992462	136993984	chr9:136992462-136993984	0	+	136992462	136992462	8553170	5	100,604,69,85,219,	0,177,880,1117,1303,
#Deleted in new
chr9	136992490	136993971	chr9:136992490-136993971	0	+	136992490	136992490	8553170	6	72,335,191,69,85,206,	0,149,562,852,1089,1275,
#Deleted in new
chr9	136992639	136993975	chr9:136992639-136993975	0	+	136992639	136992639	8553170	5	61,319,69,85,210,	0,285,703,940,1126,
#Deleted in new
chr9	136992760	136993976	chr9:136992760-136993976	0	+	136992760	136992760	8553170	4	214,191,85,211,	0,292,819,1005,
#Deleted in new
chr9	136993380	136993977	chr9:136993380-136993977	0	+	136993380	136993380	8553170	2	284,212,	0,385,
#Deleted in new
chr9	136994634	136995747	chr9:136994634-136995747	0	-	136994634	136994634	8553170	4	205,363,126,100,	0,295,807,1013,
#Deleted in new
chr9	136994634	136996803	chr9:136994634-136996803	3	-	136994680	136996543	0	6	205,176,107,126,110,293,	0,295,551,807,1013,1876,
#Deleted in new
chr9	136994733	136996537	chr9:136994733-136996537	0	-	136994733	136994733	8553170	5	106,176,107,316,27,	0,196,452,708,1777,
#Partially deleted in new
chr9	137007226	137028190	chr9:137007226-137028190	3	-	137007928	137028140	789624	49	738,207,138,103,93,104,135,142,179,118,133,124,148,116,175,61,112,106,214,317,103,207,237,121,185,183,197,213,181,165,205,151,191,115,103,174,97,168,129,160,368,219,111,128,164,112,3,94,116,	0,1189,1504,1724,2143,2314,2542,2756,2966,3393,3746,3959,4180,4407,4617,4875,5038,5258,5485,5775,6234,6605,6941,7463,7686,8187,8448,8735,9064,9347,9693,9969,10275,10560,10746,10951,11492,11676,11951,13109,13467,14165,14664,15124,15475,15714,16611,16916,20848,
#Partially deleted in new
chr9	137007233	137028288	chr9:137007233-137028288	1	-	137007928	137028140	789624	49	731,207,138,103,93,104,135,142,179,118,133,124,148,116,175,61,112,106,214,317,103,207,237,121,185,183,197,213,181,165,205,151,191,115,103,174,97,168,129,160,368,219,111,128,164,113,2,94,214,	0,1182,1497,1717,2136,2307,2535,2749,2959,3386,3739,3952,4173,4400,4610,4868,5031,5251,5478,5768,6227,6598,6934,7456,7679,8180,8441,8728,9057,9340,9686,9962,10268,10553,10739,10944,11485,11669,11944,13102,13460,14158,14657,15117,15468,15707,15825,16909,20841,
#Partially deleted in new
chr9	137007233	137028288	chr9:137007233-137028288	1	-	137007928	137028140	789624	48	731,207,138,103,93,104,135,142,179,118,133,124,148,116,175,61,112,106,214,317,103,207,237,121,185,183,197,213,181,165,205,151,191,115,103,174,97,168,129,160,368,219,111,128,164,112,94,214,	0,1182,1497,1717,2136,2307,2535,2749,2959,3386,3739,3952,4173,4400,4610,4868,5031,5251,5478,5768,6227,6598,6934,7456,7679,8180,8441,8728,9057,9340,9686,9962,10268,10553,10739,10944,11485,11669,11944,13102,13460,14158,14657,15117,15468,15707,16909,20841,
#Partially deleted in new
chr9	137007233	137028922	chr9:137007233-137028922	1	-	137007928	137028872	789624	49	731,207,138,103,93,104,135,142,179,118,133,124,148,116,175,61,112,106,214,317,103,207,237,121,185,183,197,213,181,165,205,151,191,115,103,174,97,168,129,160,368,219,111,128,164,113,2,94,206,	0,1182,1497,1717,2136,2307,2535,2749,2959,3386,3739,3952,4173,4400,4610,4868,5031,5251,5478,5768,6227,6598,6934,7456,7679,8180,8441,8728,9057,9340,9686,9962,10268,10553,10739,10944,11485,11669,11944,13102,13460,14158,14657,15117,15468,15707,15825,16909,21483,
#Deleted in new
chr9	137007241	137018219	chr9:137007241-137018219	0	-	137010517	137018219	789624	35	723,207,138,103,93,104,135,142,545,133,124,148,116,175,61,112,106,214,317,103,207,237,121,185,183,197,213,181,165,205,151,191,115,103,42,	0,1174,1489,1709,2128,2299,2527,2741,2951,3731,3944,4165,4392,4602,4860,5023,5243,5470,5760,6219,6590,6926,7448,7671,8172,8433,8720,9049,9332,9678,9954,10260,10545,10731,10936,
#Partially deleted in new
chr9	137007376	137028915	chr9:137007376-137028915	0	-	137007376	137007376	8553170	47	588,207,138,103,93,104,135,142,179,118,337,148,116,175,61,112,106,214,317,103,207,237,121,185,183,197,213,181,165,205,151,191,115,103,174,97,168,129,160,368,219,111,128,164,112,94,199,	0,1039,1354,1574,1993,2164,2392,2606,2816,3243,3596,4030,4257,4467,4725,4888,5108,5335,5625,6084,6455,6791,7313,7536,8037,8298,8585,8914,9197,9543,9819,10125,10410,10596,10801,11342,11526,11801,12959,13317,14015,14514,14974,15325,15564,16766,21340,
#Partially deleted in new
chr9	137007376	137028915	chr9:137007376-137028915	0	-	137016470	137028872	789624	47	588,207,138,103,93,104,135,142,179,118,133,124,343,175,61,112,106,214,317,103,207,237,121,185,183,197,213,181,124,205,151,191,115,103,174,97,168,129,160,368,219,111,128,164,112,94,199,	0,1039,1354,1574,1993,2164,2392,2606,2816,3243,3596,3809,4030,4467,4725,4888,5108,5335,5625,6084,6455,6791,7313,7536,8037,8298,8585,8914,9197,9543,9819,10125,10410,10596,10801,11342,11526,11801,12959,13317,14015,14514,14974,15325,15564,16766,21340,
#Deleted in new
chr9	137007656	137009183	chr9:137007656-137009183	0	-	137007656	137007656	8553170	4	308,207,138,233,	0,759,1074,1294,
#Deleted in new
chr9	137007850	137009578	chr9:137007850-137009578	0	-	137007928	137009578	789624	6	114,180,138,103,93,38,	0,565,880,1100,1519,1690,
#Deleted in new
chr9	137008235	137008788	chr9:137008235-137008788	0	-	137008235	137008235	8553170	2	387,58,	0,495,
#Deleted in new
chr9	137009350	137011016	chr9:137009350-137011016	0	-	137009350	137009350	8553170	6	112,104,135,142,118,44,	0,190,418,632,1269,1622,
#Deleted in new
chr9	137009406	137010384	chr9:137009406-137010384	0	-	137009406	137009406	8553170	4	56,104,135,402,	0,134,362,576,
#Deleted in new
chr9	137011476	137012949	chr9:137011476-137012949	0	-	137011476	137011476	8553170	7	78,116,175,61,112,106,238,	0,157,367,625,788,1008,1235,
#Deleted in new
chr9	137012324	137018211	chr9:137012324-137018211	0	-	137012558	137018211	789624	20	52,153,214,317,103,207,237,121,185,183,197,213,181,165,205,151,191,115,103,34,	0,160,387,677,1136,1507,1843,2365,2588,3089,3350,3637,3966,4249,4595,4871,5177,5462,5648,5853,
#Deleted in new
chr9	137017561	137018218	chr9:137017561-137018218	0	-	137017561	137017561	8553170	2	514,41,	0,616,
#Partially deleted in new
chr9	137018211	137028171	chr9:137018211-137028171	0	-	137018211	137018211	8553170	12	140,97,168,129,160,368,219,111,128,351,94,97,	0,507,691,966,2124,2482,3180,3679,4139,4490,5931,9863,
#Partially deleted in new
chr9	137018782	137020805	chr9:137018782-137020805	0	-	137020457	137020805	789624	5	33,168,129,144,112,	0,120,395,1553,1911,
#Deleted in new
chr9	137018954	137019363	chr9:137018954-137019363	0	-	137018954	137018954	8553170	2	116,186,	0,223,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chr9	137019425	137028178	chr9:137019425-137028178	0	-	137019425	137019425	8553170	8	1070,368,610,128,164,900,94,104,	0,1268,1966,2925,3276,3515,4717,8649,
#Partially deleted in new
chr9	137020182	137028184	chr9:137020182-137028184	0	-	137020182	137020182	8553170	10	313,368,219,111,128,164,112,3,94,110,	0,511,1209,1708,2168,2519,2758,3655,3960,7892,
#Partially deleted in new
chr9	137021666	137028877	chr9:137021666-137028877	0	-	137021666	137021666	8553170	7	335,128,164,112,3,94,161,	0,684,1035,1274,2171,2476,7050,
#Partially deleted in new
chr9	137021780	137028873	chr9:137021780-137028873	0	-	137021780	137021780	8553170	6	221,128,164,112,94,157,	0,570,921,1160,2362,6936,
#Partially deleted in new
chr9	137022940	137028878	chr9:137022940-137028878	0	-	137022940	137028872	789624	4	112,3,94,162,	0,897,1202,5776,
#Partially deleted in new
chr9	137023812	137028807	chr9:137023812-137028807	0	-	137023812	137023812	8553170	3	28,94,91,	0,330,4904,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	137027463	137037957	chr9:137027463-137037957	3	+	137027463	137027463	8553170	3	448,1234,3308,	0,4534,7186,
#Deleted in new
chr9	137030173	137033010	chr9:137030173-137033010	3	-	137030709	137031991	789624	2	1552,1032,	0,1805,
#Partially deleted in new
chr9	137031240	137040436	chr9:137031240-137040436	0	-	137032007	137040436	789624	4	485,84,97,80,	0,738,8730,9116,
#Partially deleted in new
chr9	137031316	137040387	chr9:137031316-137040387	3	-	137032007	137040387	789624	5	409,84,144,97,31,	0,662,1419,8654,9040,
#Partially deleted in new
chr9	137039469	137044092	chr9:137039469-137044092	1	-	137039771	137043419	789624	8	395,97,80,85,67,171,126,1166,	0,501,887,1044,1201,1344,1592,3457,
#Partially deleted in new
chr9	137039469	137046203	chr9:137039469-137046203	3	-	137039771	137045989	789624	9	395,97,80,85,67,171,126,147,326,	0,501,887,1044,1201,1344,1592,3457,6408,
#Deleted in new
chr9	137039667	137040156	chr9:137039667-137040156	0	-	137039667	137039667	8553170	2	197,186,	0,303,
#Deleted in new
chr9	137039683	137040378	chr9:137039683-137040378	0	-	137040061	137040378	789624	3	181,155,22,	0,287,673,
#Partially deleted in new
chr9	137040812	137046056	chr9:137040812-137046056	0	-	137040812	137040812	8553170	3	375,147,179,	0,2114,5065,
#Deleted in new
chr9	137042869	137046179	chr9:137042869-137046179	0	-	137042869	137042869	8553170	2	204,302,	0,3008,
#Deleted in new
chr9	137048097	137054045	chr9:137048097-137054045	3	-	137048656	137053997	789624	9	763,135,120,255,228,160,151,118,165,	0,843,1772,2186,2804,3113,3412,4133,5783,
#Deleted in new
chr9	137048106	137049613	chr9:137048106-137049613	0	-	137048106	137048106	8553170	2	754,673,	0,834,
#Deleted in new
chr9	137048596	137054018	chr9:137048596-137054018	1	-	137048656	137053997	789624	9	264,66,120,255,228,160,151,118,138,	0,344,1273,1687,2305,2614,2913,3634,5284,
#Deleted in new
chr9	137050287	137054000	chr9:137050287-137054000	0	-	137050287	137050287	8553170	5	251,228,151,118,120,	0,614,1222,1943,3593,
#Deleted in new
chr9	137052661	137053375	chr9:137052661-137053375	3	+	137052661	137052661	8553170	2	214,366,	0,348,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	137057662	137062461	chr9:137057662-137062461	3	+	137057662	137057662	8553170	2	167,134,	0,4665,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	137062123	137070588	chr9:137062123-137070588	3	-	137064658	137070460	789624	6	2664,117,108,147,113,699,	0,2739,2954,3398,4138,7766,
#Deleted in new
chr9	137063534	137064581	chr9:137063534-137064581	3	+	137063534	137063534	8553170	2	607,141,	0,906,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	137077500	137084538	chr9:137077500-137084538	3	+	137077532	137082729	789624	9	321,205,176,173,194,141,186,67,1902,	0,549,1001,1475,1755,2501,3188,4497,5136,
#Deleted in new
chr9	137077525	137079148	chr9:137077525-137079148	0	+	137077532	137078512	789624	3	296,176,173,	0,976,1450,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chr9	137078140	137084539	chr9:137078140-137084539	1	+	137078376	137082729	789624	7	537,173,194,141,186,67,1903,	0,835,1115,1861,2548,3857,4496,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	137078598	137084538	chr9:137078598-137084538	0	+	137078598	137078598	8553170	4	79,173,1619,2541,	0,377,657,3399,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	137084945	137086817	chr9:137084945-137086817	3	-	137084945	137084945	789624	1	1872,	0,
#Partially deleted in new
chr9	137086926	137109187	chr9:137086926-137109187	3	+	137086999	137108591	0	13	292,109,137,155,110,186,149,189,191,121,198,132,800,	0,1148,1942,9310,10901,12769,14078,14557,19198,19762,20323,20604,21461,
#Partially deleted in new
chr9	137086984	137108591	chr9:137086984-137108591	0	+	137086999	137107361	789624	13	234,109,137,155,110,186,149,189,191,121,173,132,204,	0,1090,1884,9252,10843,12711,14020,14499,19140,19704,20290,20546,21403,
#Partially deleted in new
chr9	137087079	137108142	chr9:137087079-137108142	1	+	137087107	137107962	789624	12	139,109,137,155,110,186,149,189,191,121,198,612,	0,995,1789,9157,10748,12616,13925,14404,19045,19609,20170,20451,
#Partially deleted in new
chr9	137087080	137101853	chr9:137087080-137101853	0	+	137087080	137088368	789624	9	138,109,131,137,155,110,186,149,370,	0,994,1187,1788,9156,10747,12615,13924,14403,
#Partially deleted in new
chr9	137087080	137096280	chr9:137087080-137096280	0	+	137087080	137087239	789624	4	283,109,137,44,	0,994,1788,9156,
#Partially deleted in new
chr9	137087082	137097919	chr9:137087082-137097919	0	+	137087082	137097919	789624	5	136,109,53,155,92,	0,992,1870,9154,10745,
#Deleted in new
chr9	137087083	137088560	chr9:137087083-137088560	0	+	137087083	137087083	8553170	2	135,486,	0,991,
#Partially deleted in new
chr9	137087357	137096351	chr9:137087357-137096351	0	+	137087357	137087357	8553170	4	209,109,137,115,	0,717,1511,8879,
#Partially deleted in new
chr9	137089180	137109181	chr9:137089180-137109181	0	+	137089180	137089180	8553170	11	111,155,110,186,149,189,191,121,198,132,794,	0,7056,8647,10515,11824,12303,16944,17508,18069,18350,19207,
#Partially deleted in new
chr9	137094344	137094430	chr9:137094344-137094430	3	+	137094344	137094344	8553170	1	86,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	137102512	137109181	chr9:137102512-137109181	0	+	137102512	137102512	8553170	5	3803,121,198,132,794,	0,4176,4737,5018,5875,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chr9	137103347	137109181	chr9:137103347-137109181	0	+	137103347	137103347	8553170	6	982,1713,121,198,132,794,	0,1255,3341,3902,4183,5040,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	137103649	137109181	chr9:137103649-137109181	0	+	137103649	137103649	8553170	5	2666,121,173,132,794,	0,3039,3625,3881,4738,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	137104425	137109181	chr9:137104425-137109181	0	+	137104425	137104425	8553170	4	2384,173,132,794,	0,2849,3105,3962,
#Deleted in new
chr9	137107169	137107806	chr9:137107169-137107806	0	+	137107169	137107169	8553170	2	278,276,	0,361,
#Deleted in new
chr9	137107263	137109119	chr9:137107263-137109119	0	+	137107263	137109025	789624	3	184,132,589,	0,267,1267,
#Deleted in new
chr9	137107371	137108992	chr9:137107371-137108992	0	+	137107371	137108591	789624	3	76,132,566,	0,159,1055,
#Partially deleted in new
chr9	137110541	137114718	chr9:137110541-137114718	3	-	137110647	137114713	0	13	242,71,65,157,119,61,167,82,136,164,140,114,72,	0,338,1148,1331,1570,2203,2411,2664,2819,3323,3701,3921,4105,
#Partially deleted in new
chr9	137110545	137112215	chr9:137110545-137112215	0	-	137110934	137112215	789624	4	238,71,65,104,	0,334,1144,1566,
#Partially deleted in new
chr9	137110545	137114492	chr9:137110545-137114492	0	-	137112986	137114492	789624	10	238,71,65,89,119,61,167,164,140,30,	0,334,1144,1395,1566,2199,2407,3319,3697,3917,
#Partially deleted in new
chr9	137110605	137113112	chr9:137110605-137113112	0	-	137110647	137113112	789624	7	178,71,65,157,58,86,160,	0,274,1084,1267,1506,2114,2347,
#Partially deleted in new
chr9	137110611	137112604	chr9:137110611-137112604	0	-	137110611	137110611	8553170	5	172,71,65,157,493,	0,268,1078,1261,1500,
#Deleted in new
chr9	137111998	137114691	chr9:137111998-137114691	0	-	137113961	137114691	789624	9	31,119,61,167,82,164,136,114,45,	0,113,746,954,1207,1866,2244,2464,2648,
#Deleted in new
chr9	137112132	137114718	chr9:137112132-137114718	0	-	137112132	137112132	8553170	7	98,61,167,82,164,140,256,	0,612,820,1073,1732,2110,2330,
#Deleted in new
chr9	137112377	137113249	chr9:137112377-137113249	0	-	137112377	137112377	8553170	3	428,167,44,	0,575,828,
#Deleted in new
chr9	137112816	137113415	chr9:137112816-137113415	0	-	137112816	137112816	8553170	3	303,82,55,	0,389,544,
#Deleted in new
chr9	137112962	137114726	chr9:137112962-137114726	0	-	137112962	137112962	8553170	6	157,82,136,164,140,264,	0,243,398,902,1280,1500,
#Deleted in new
chr9	137113374	137114704	chr9:137113374-137114704	0	-	137113374	137114704	789624	5	341,164,140,114,58,	0,490,868,1088,1272,
#Deleted in new
chr9	137113433	137115177	chr9:137113433-137115177	0	-	137113433	137113433	8553170	5	63,164,140,114,203,	0,431,809,1029,1541,
#Deleted in new
chr9	137113433	137114703	chr9:137113433-137114703	0	-	137113433	137113433	8553170	4	63,164,334,57,	0,431,809,1213,
#Partially deleted in new
chr9	137138389	137168762	chr9:137138389-137168762	3	+	137139486	137167527	0	20	1355,135,177,101,122,175,145,84,142,128,165,119,113,149,158,162,110,146,111,1352,	0,3623,7336,10619,18279,18473,19989,20231,22666,22899,23534,23782,24014,24201,24456,24779,25169,25369,26796,29021,
#Partially deleted in new
chr9	137139174	137165422	chr9:137139174-137165422	0	+	137139486	137158435	789624	19	570,135,177,63,101,122,158,145,84,142,128,165,119,113,149,158,162,110,1664,	0,2838,6551,8977,9834,17494,17705,19204,19446,21881,22114,22749,22997,23229,23416,23671,23994,24384,24584,
#Partially deleted in new
chr9	137139409	137165422	chr9:137139409-137165422	0	+	137139409	137139409	8553170	18	335,135,177,101,122,175,145,84,142,128,165,119,113,149,158,162,110,1664,	0,2603,6316,9599,17259,17453,18969,19211,21646,21879,22514,22762,22994,23181,23436,23759,24149,24349,
#Partially deleted in new
chr9	137139480	137168755	chr9:137139480-137168755	1	+	137139486	137167527	0	21	264,135,177,63,101,122,175,145,84,142,128,165,119,113,149,158,162,110,146,111,1345,	0,2532,6245,8671,9528,17188,17382,18898,19140,21575,21808,22443,22691,22923,23110,23365,23688,24078,24278,25705,27930,
#Partially deleted in new
chr9	137139480	137168755	chr9:137139480-137168755	1	+	137139486	137167527	0	19	264,135,177,101,122,175,145,84,142,128,165,119,113,149,158,162,110,146,1345,	0,2532,6245,9528,17188,17382,18898,19140,21575,21808,22443,22691,22923,23110,23365,23688,24078,24278,27930,
#Partially deleted in new
chr9	137139480	137168755	chr9:137139480-137168755	1	+	137139486	137167842	0	21	264,135,177,63,101,122,175,145,84,142,128,165,119,113,149,158,162,110,146,111,982,	0,2532,6245,8671,9528,17188,17382,18898,19140,21575,21808,22443,22691,22923,23110,23365,23688,24078,24278,25705,28293,
#Partially deleted in new
chr9	137139480	137168755	chr9:137139480-137168755	1	+	137139486	137167527	789624	20	264,135,177,63,101,122,175,145,84,142,128,165,119,113,149,158,162,110,146,1345,	0,2532,6245,8671,9528,17188,17382,18898,19140,21575,21808,22443,22691,22923,23110,23365,23688,24078,24278,27930,
#Partially deleted in new
chr9	137139480	137168755	chr9:137139480-137168755	1	+	137139486	137167842	0	19	264,135,177,101,122,175,145,84,142,128,165,119,113,149,158,162,110,146,982,	0,2532,6245,9528,17188,17382,18898,19140,21575,21808,22443,22691,22923,23110,23365,23688,24078,24278,28293,
#Partially deleted in new
chr9	137139480	137168755	chr9:137139480-137168755	1	+	137139486	137167842	0	20	264,135,177,63,101,122,175,145,84,142,128,165,119,113,149,158,162,110,146,982,	0,2532,6245,8671,9528,17188,17382,18898,19140,21575,21808,22443,22691,22923,23110,23365,23688,24078,24278,28293,
#Deleted in new
chr9	137156975	137158717	chr9:137156975-137158717	0	+	137156975	137156975	8553170	2	62,339,	0,1403,
#Deleted in new
chr9	137162705	137164138	chr9:137162705-137164138	0	+	137162705	137162705	8553170	5	34,158,162,110,380,	0,140,463,853,1053,
#Deleted in new
chr9	137165116	137167534	chr9:137165116-137167534	0	+	137165116	137165116	8553170	2	180,124,	0,2294,
#Deleted in new
chr9	137167922	137168755	chr9:137167922-137168755	0	+	137167922	137167922	8553170	2	92,293,	0,540,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	137168757	137170051	chr9:137168757-137170051	3	-	137168853	137169943	789624	2	428,781,	0,513,
#Partially deleted in new
chr9	137168853	137171984	chr9:137168853-137171984	3	-	137171440	137171984	789624	3	332,30,98,	0,2560,3033,
#Deleted in new
chr9	137169185	137169270	chr9:137169185-137169270	3	-	137169185	137169185	5263520	1	85,	0,
#Deleted in new
chr9	137170857	137171749	chr9:137170857-137171749	0	-	137170857	137170857	8553170	3	307,114,109,	0,556,783,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	137170927	137172409	chr9:137170927-137172409	3	-	137170974	137172027	789624	4	237,30,136,470,	0,486,713,1012,
#Deleted in new
chr9	137170927	137171581	chr9:137170927-137171581	0	-	137170927	137170927	8553170	2	237,168,	0,486,
#Deleted in new
chr9	137170929	137172046	chr9:137170929-137172046	0	-	137171760	137172027	789624	4	235,30,136,165,	0,484,711,952,
#Partially deleted in new
chr9	137174783	137188537	chr9:137174783-137188537	3	-	137174941	137188532	0	13	371,236,130,204,76,142,182,118,120,175,133,623,122,	0,453,924,5397,5668,6004,6897,8341,8888,10129,11440,12697,13632,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	137174783	137177072	chr9:137174783-137177072	0	-	137174783	137174783	8553170	3	371,236,1365,	0,453,924,
#Deleted in new
chr9	137175273	137176109	chr9:137175273-137176109	0	-	137175273	137175273	8553170	2	195,402,	0,434,
#Partially deleted in new
chr9	137175274	137180477	chr9:137175274-137180477	0	-	137175274	137175274	8553170	3	563,204,26,	0,4906,5177,
#Deleted in new
chr9	137175331	137176072	chr9:137175331-137176072	0	-	137175331	137175331	8553170	3	141,130,70,	0,376,671,
#Partially deleted in new
chr9	137181681	137183614	chr9:137181681-137183614	0	-	137181681	137181681	8553170	2	181,490,	0,1443,
#Partially deleted in new
chr9	137181814	137186509	chr9:137181814-137186509	0	-	137181814	137181814	8553170	5	48,118,120,175,286,	0,1310,1857,3098,4409,
#Deleted in new
chr9	137186672	137188549	chr9:137186672-137188549	0	-	137186672	137186672	8553170	2	1431,134,	0,1743,
#Deleted in new
chr9	137188646	137190370	chr9:137188646-137190370	3	+	137188726	137189914	789624	3	132,200,564,	0,419,1160,
#Deleted in new
chr9	137188659	137190370	chr9:137188659-137190370	0	+	137188659	137188659	8553170	2	606,564,	0,1147,
#Deleted in new
chr9	137188698	137189923	chr9:137188698-137189923	0	+	137188698	137188698	8553170	2	453,117,	0,1108,
#Deleted in new
chr9	137188705	137190370	chr9:137188705-137190370	1	+	137188726	137189914	789624	3	73,86,564,	0,360,1101,
#Partially deleted in new
chr9	137191616	137200105	chr9:137191616-137200105	0	-	137192111	137200105	789624	3	749,241,1119,	0,834,7370,
#Partially deleted in new
chr9	137191616	137200741	chr9:137191616-137200741	3	-	137192111	137200711	789624	4	558,107,241,1755,	0,642,834,7370,
#Deleted in new
chr9	137191618	137195137	chr9:137191618-137195137	0	-	137191618	137191618	8553170	3	556,107,2687,	0,640,832,
#Partially deleted in new
chr9	137192651	137204193	chr9:137192651-137204193	0	-	137192651	137192651	8553170	2	40,90,	0,11452,
#Deleted in new
chr9	137204081	137205638	chr9:137204081-137205638	3	-	137205003	137205414	789624	1	1557,	0,
#Partially deleted in new
chr9	137205684	137215146	chr9:137205684-137215146	0	+	137205684	137205684	8553170	8	228,78,98,99,102,75,122,349,	0,547,6817,8095,8282,8685,8885,9113,
#Partially deleted in new
chr9	137205694	137217009	chr9:137205694-137217009	1	+	137205777	137216416	0	14	218,78,98,99,102,210,122,221,108,115,147,119,122,738,	0,537,6807,8085,8272,8509,8875,9103,9400,9712,9964,10204,10372,10577,
#Partially deleted in new
chr9	137205697	137212821	chr9:137205697-137212821	0	+	137205697	137205697	8553170	3	215,29,320,	0,583,6804,
#Partially deleted in new
chr9	137205705	137216989	chr9:137205705-137216989	1	+	137205777	137216312	0	13	207,78,98,99,210,122,221,108,115,147,119,73,718,	0,526,6796,8074,8498,8864,9092,9389,9701,9953,10193,10388,10566,
#Partially deleted in new
chr9	137205749	137216444	chr9:137205749-137216444	1	+	137205777	137216416	0	14	163,78,98,99,102,210,122,221,108,94,147,119,95,173,	0,482,6752,8030,8217,8454,8820,9048,9345,9678,9909,10149,10344,10522,
#Partially deleted in new
chr9	137205777	137216416	chr9:137205777-137216416	3	+	137205777	137216416	0	14	135,78,98,99,102,210,122,221,108,115,147,119,95,145,	0,454,6724,8002,8189,8426,8792,9020,9317,9629,9881,10121,10316,10494,
#Deleted in new
chr9	137217451	137219361	chr9:137217451-137219361	3	+	137217996	137218602	789624	1	1910,	0,
#Deleted in new
chr9	137220246	137221323	chr9:137220246-137221323	1	-	137220426	137221212	789624	1	1077,	0,
#Deleted in new
chr9	137220246	137221581	chr9:137220246-137221581	3	-	137220426	137221212	789624	2	1062,73,	0,1262,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	137224634	137226311	chr9:137224634-137226311	3	+	137225121	137226056	789624	2	599,698,	0,979,
#Deleted in new
chr9	137227270	137229638	chr9:137227270-137229638	3	+	137228335	137229086	789624	3	591,190,1017,	0,881,1351,
#Deleted in new
chr9	137230756	137236554	chr9:137230756-137236554	3	+	137231702	137236416	789624	13	182,127,90,129,144,112,196,90,79,168,117,125,603,	0,904,1315,1818,2027,2247,2452,2876,3106,3352,3659,3850,5195,
#Deleted in new
chr9	137230932	137236554	chr9:137230932-137236554	1	+	137231702	137236416	789624	13	147,124,90,129,144,112,196,90,79,168,117,125,603,	0,731,1139,1642,1851,2071,2276,2700,2930,3176,3483,3674,5019,
#Deleted in new
chr9	137241212	137243707	chr9:137241212-137243707	3	+	137241360	137243556	789624	4	205,109,111,1212,	0,508,698,1283,
#Deleted in new
chr9	137241287	137243706	chr9:137241287-137243706	0	+	137241287	137241287	8553170	3	130,109,1796,	0,433,623,
#Partially deleted in new
chr9	137243583	137247770	chr9:137243583-137247770	0	-	137243583	137243583	8553170	6	205,808,130,251,215,111,	0,587,1505,1723,2055,4076,
#Partially deleted in new
chr9	137243584	137247770	chr9:137243584-137247770	3	-	137243699	137247715	789624	7	204,118,95,130,251,215,111,	0,586,1057,1504,1722,2054,4075,
#Partially deleted in new
chr9	137245151	137247750	chr9:137245151-137247750	0	-	137245151	137247715	789624	3	67,547,91,	0,155,2508,
#Deleted in new
chr9	137250218	137253497	chr9:137250218-137253497	3	-	137250218	137250218	789624	4	1149,116,101,335,	0,2172,2656,2944,
#Deleted in new
chr9	137251260	137253483	chr9:137251260-137253483	1	+	137251286	137253463	789624	6	136,158,135,89,304,385,	0,477,740,1176,1401,1838,
#Deleted in new
chr9	137251260	137253483	chr9:137251260-137253483	3	+	137251286	137253245	789624	6	136,158,135,89,304,369,	0,477,740,1176,1401,1854,
#Deleted in new
chr9	137251260	137253482	chr9:137251260-137253482	1	+	137251286	137253245	789624	6	136,158,135,89,139,368,	0,477,740,1176,1566,1854,
#Deleted in new
chr9	137251261	137253482	chr9:137251261-137253482	0	+	137251286	137252506	789624	6	135,158,55,89,127,384,	0,476,739,1175,1577,1837,
#Deleted in new
chr9	137251285	137253481	chr9:137251285-137253481	1	+	137251286	137253463	789624	6	111,158,135,89,139,383,	0,452,715,1151,1541,1813,
#Deleted in new
chr9	137251291	137252434	chr9:137251291-137252434	0	+	137251291	137251291	8553170	2	105,697,	0,446,
#Deleted in new
chr9	137251304	137253483	chr9:137251304-137253483	0	+	137251304	137252438	789624	5	92,158,89,304,369,	0,433,1132,1357,1810,
#Partially deleted in new
chr9	137255172	137273546	chr9:137255172-137273546	1	+	137255365	137272928	789624	13	439,164,100,231,186,113,103,96,143,107,142,109,765,	0,734,1156,1651,7864,9072,10704,11158,11771,12067,16908,17334,17609,
#Partially deleted in new
chr9	137255365	137272928	chr9:137255365-137272928	3	+	137255365	137272928	789624	13	246,164,100,231,186,113,103,96,143,107,142,109,147,	0,541,963,1458,7671,8879,10511,10965,11578,11874,16715,17141,17416,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	137277748	137282641	chr9:137277748-137282641	3	+	137278689	137279961	789624	2	159,3989,	0,904,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	137286111	137287236	chr9:137286111-137287236	7	+	137286111	137286111	16724991	2	274,241,	0,884,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	137293867	137295721	chr9:137293867-137295721	3	-	137293867	137293867	8553170	1	1854,	0,
#Deleted in new
chr9	137300481	137302251	chr9:137300481-137302251	3	-	137301583	137301928	789624	1	1770,	0,
#Partially deleted in new
chr9	137306895	137366632	chr9:137306895-137366632	0	-	137354591	137366632	789624	15	368,94,132,54,81,173,163,110,211,136,167,39,207,101,140,	0,2711,16829,17194,41175,42214,42473,44142,44422,45170,45724,47443,47671,49372,59597,
#Partially deleted in new
chr9	137306904	137423262	chr9:137306904-137423262	3	-	137306949	137395357	789624	22	359,39,94,132,54,168,173,163,110,211,136,167,39,74,101,140,54,168,174,65,102,149,	0,703,2702,16820,17185,41166,42205,42464,44133,44413,45161,45715,47434,47795,49363,59588,61031,66000,66521,76408,88398,116209,
#Partially deleted in new
chr9	137306916	137352984	chr9:137306916-137352984	0	-	137306916	137306916	8553170	12	347,39,94,132,54,168,173,163,110,211,136,365,	0,691,2690,16808,17173,41154,42193,42452,44121,44401,45149,45703,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	137343158	137366541	chr9:137343158-137366541	0	-	137366095	137366541	789624	13	339,246,168,173,163,110,211,136,167,39,101,1030,49,	0,2572,4912,5951,6210,7879,8159,8907,9461,11180,13109,21968,23334,
#Deleted in new
chr9	137349380	137353758	chr9:137349380-137353758	0	-	137349380	137349380	8553170	5	151,110,211,167,115,	0,1657,1937,3239,4263,
#Deleted in new
chr9	137351475	137353771	chr9:137351475-137353771	0	-	137351475	137351475	8553170	5	53,136,167,72,128,	0,590,1144,1397,2168,
#Deleted in new
chr9	137352632	137357297	chr9:137352632-137357297	0	-	137352632	137352632	8553170	5	154,39,207,101,41,	0,1706,1934,3635,4624,
#Partially deleted in new
chr9	137353899	137395408	chr9:137353899-137395408	0	-	137353899	137353899	8553170	10	202,39,74,101,140,54,168,174,65,106,	0,439,800,2368,12593,14036,19005,19526,29413,41403,
#Duplicated in new
chr9	137366144	137423211	chr9:137366144-137423211	0	-	137381243	137395357	789624	11	217,140,54,168,174,152,208,54,65,102,98,	0,348,1791,6760,7281,8467,10929,15048,17168,29158,56969,
#Partially deleted in new
chr9	137366144	137423155	chr9:137366144-137423155	1	-	137366276	137395357	789624	8	217,140,54,168,174,65,102,42,	0,348,1791,6760,7281,17168,29158,56969,
#Partially deleted in new
chr9	137367564	137423159	chr9:137367564-137423159	0	-	137367564	137367564	8553170	7	425,168,174,152,65,102,46,	0,5340,5861,7047,15748,27738,55549,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	137391801	137423162	chr9:137391801-137423162	1	-	137393119	137395357	789624	3	1434,102,49,	0,3501,31312,
#Partially deleted in new
chr9	137423349	137434406	chr9:137423349-137434406	3	+	137423529	137434360	789624	14	357,83,109,135,108,60,26,106,46,59,155,115,115,204,	0,2898,4683,5532,5926,7434,7725,7886,9679,9855,10103,10400,10615,10853,
#Partially deleted in new
chr9	137423394	137434405	chr9:137423394-137434405	1	+	137423529	137434360	789624	12	312,83,109,135,26,106,46,59,155,115,115,203,	0,2853,4638,5487,7680,7841,9634,9810,10058,10355,10570,10808,
#Deleted in new
chr9	137434363	137441449	chr9:137434363-137441449	3	-	137434913	137438285	789624	9	742,135,264,231,160,151,118,146,164,	0,840,1649,2157,2505,2795,3603,3796,6922,
#Deleted in new
chr9	137434363	137441449	chr9:137434363-137441449	1	-	137434913	137438285	789624	10	742,135,111,264,231,160,151,118,146,164,	0,840,1355,1649,2157,2505,2795,3603,3796,6922,
#Deleted in new
chr9	137434363	137441816	chr9:137434363-137441816	0	-	137434363	137434363	8553170	8	742,135,111,264,789,118,146,531,	0,840,1355,1649,2157,3603,3796,6922,
#Deleted in new
chr9	137434669	137438302	chr9:137434669-137438302	1	-	137434913	137438285	789624	9	436,135,111,264,231,160,151,118,143,	0,534,1049,1343,1851,2199,2489,3297,3490,
#Deleted in new
chr9	137436561	137438246	chr9:137436561-137438246	0	-	137436561	137438246	789624	5	190,122,151,118,87,	0,307,597,1405,1598,
#Deleted in new
chr9	137447572	137459334	chr9:137447572-137459334	1	-	137449393	137459102	789624	15	1919,76,103,80,71,34,84,125,53,69,6,76,495,62,303,	0,2026,2350,2603,4792,4980,5163,5483,6818,7666,8056,8838,9834,10915,11459,
#Deleted in new
chr9	137447572	137459334	chr9:137447572-137459334	1	-	137449393	137459102	789624	14	1919,76,103,80,71,34,84,125,90,53,76,495,62,303,	0,2026,2350,2603,4792,4980,5163,5483,6158,6818,8838,9834,10915,11459,
#Deleted in new
chr9	137447572	137459334	chr9:137447572-137459334	1	-	137449393	137459102	789624	15	1919,76,103,80,71,34,84,125,90,53,6,76,495,62,303,	0,2026,2350,2603,4792,4980,5163,5483,6158,6818,8056,8838,9834,10915,11459,
#Deleted in new
chr9	137448224	137459302	chr9:137448224-137459302	1	-	137449393	137459102	789624	16	62,101,76,103,80,71,34,84,125,90,53,69,76,495,62,271,	0,1166,1374,1698,1951,4140,4328,4511,4831,5506,6166,7014,8186,9182,10263,10807,
#Deleted in new
chr9	137448224	137454656	chr9:137448224-137454656	0	-	137448224	137448224	8553170	9	1267,76,103,80,71,34,1085,53,119,	0,1374,1698,1951,4140,4328,4511,6166,6313,
#Deleted in new
chr9	137448231	137459334	chr9:137448231-137459334	3	-	137449393	137459102	789624	15	1260,76,103,80,71,34,84,125,90,53,69,76,495,62,303,	0,1367,1691,1944,4133,4321,4504,4824,5499,6159,7007,8179,9175,10256,10800,
#Deleted in new
chr9	137448231	137459334	chr9:137448231-137459334	1	-	137449393	137459102	789624	16	1260,76,103,80,71,34,84,125,90,53,69,6,76,495,62,303,	0,1367,1691,1944,4133,4321,4504,4824,5499,6159,7007,7397,8179,9175,10256,10800,
#Deleted in new
chr9	137449606	137454432	chr9:137449606-137454432	0	-	137449606	137449606	8553170	8	68,103,80,71,34,445,90,42,	0,316,569,2758,2946,3129,4124,4784,
#Deleted in new
chr9	137449934	137453171	chr9:137449934-137453171	0	-	137449934	137453171	789624	6	166,80,71,34,84,116,	0,241,2430,2618,2801,3121,
#Deleted in new
chr9	137450025	137450086	chr9:137450025-137450086	3	-	137450025	137450025	5263520	1	61,	0,
#Deleted in new
chr9	137452464	137454492	chr9:137452464-137454492	0	-	137452464	137452464	8553170	4	355,125,90,102,	0,591,1266,1926,
#Partially deleted in new
chr9	137459952	137550384	chr9:137459952-137550384	3	-	137460392	137550197	789624	34	524,104,85,111,153,149,117,70,117,157,119,183,169,64,150,70,114,124,132,206,78,147,101,141,127,81,129,81,160,141,92,80,88,217,	0,681,1583,1978,2226,2732,3462,4173,4387,7364,18081,19103,20359,21007,24634,33060,35080,37234,38161,40738,41697,45661,46030,55426,59964,61683,62776,80689,82689,83479,83771,86877,87356,90215,
#Partially deleted in new
chr9	137459952	137550534	chr9:137459952-137550534	1	-	137460392	137550197	789624	35	524,104,85,111,153,149,117,70,117,157,119,183,169,64,150,70,114,124,132,206,78,147,101,141,127,81,129,81,160,141,92,80,88,75,367,	0,681,1583,1978,2226,2732,3462,4173,4387,7364,18081,19103,20359,21007,24634,33060,35080,37234,38161,40738,41697,45661,46030,55426,59964,61683,62776,80689,82689,83479,83771,86877,87356,87632,90215,
#Partially deleted in new
chr9	137459952	137480727	chr9:137459952-137480727	0	-	137459952	137459952	8553170	10	524,987,111,153,149,117,331,157,1205,416,	0,681,1978,2226,2732,3462,4173,7364,18081,20359,
#Partially deleted in new
chr9	137459952	137479431	chr9:137459952-137479431	0	-	137459952	137459952	8553170	5	524,2898,331,157,1398,	0,681,4173,7364,18081,
#Deleted in new
chr9	137463434	137464820	chr9:137463434-137464820	0	-	137463434	137463434	8553170	2	97,695,	0,691,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chr9	137508807	137550384	chr9:137508807-137550384	0	-	137508807	137508807	8553170	13	1007,141,127,81,129,81,160,141,92,80,88,75,217,	0,6571,11109,12828,13921,31834,33834,34624,34916,38022,38501,38777,41360,
#Partially deleted in new
chr9	137522736	137547374	chr9:137522736-137547374	0	-	137540750	137547333	789624	7	121,214,160,141,92,80,66,	0,17905,19905,20695,20987,24093,24572,
#Deleted in new
chr9	137551198	137552555	chr9:137551198-137552555	3	+	137552081	137552495	0	2	780,482,	0,875,
#Partially deleted in new
chr9	137554903	137564999	chr9:137554903-137564999	0	-	137554903	137554903	8553170	2	745,566,	0,9530,
#Partially deleted in new
chr9	137554903	137578888	chr9:137554903-137578888	0	-	137554903	137554903	8553170	7	745,173,262,173,92,88,264,	0,9530,9989,19304,19848,21176,23721,
#Partially deleted in new
chr9	137554908	137578935	chr9:137554908-137578935	3	-	137555238	137578777	789624	9	740,173,66,70,173,92,88,134,311,	0,9525,9984,10176,19299,19843,21171,22561,23716,
#Partially deleted in new
chr9	137556602	137565493	chr9:137556602-137565493	0	-	137556602	137556602	8553170	4	213,173,66,409,	0,7831,8290,8482,
#Partially deleted in new
chr9	137564583	137575216	chr9:137564583-137575216	0	-	137564583	137564583	8553170	5	23,66,70,173,465,	0,309,501,9624,10168,
#Partially deleted in new
chr9	137564895	137578888	chr9:137564895-137578888	0	-	137564895	137564895	8553170	6	63,70,173,92,88,264,	0,189,9312,9856,11184,13729,
#Partially deleted in new
chr9	137565096	137575369	chr9:137565096-137575369	0	-	137565096	137565096	8553170	2	58,1162,	0,9111,
#Partially deleted in new
chr9	137574263	137578875	chr9:137574263-137578875	0	-	137574263	137574263	8553170	4	117,95,459,251,	0,488,1445,4361,
#Partially deleted in new
chr9	137575452	137578908	chr9:137575452-137578908	0	-	137575452	137575452	8553170	2	715,284,	0,3172,
#Partially deleted in new
chr9	137582078	137590490	chr9:137582078-137590490	3	-	137582542	137590263	789624	6	608,181,141,107,60,278,	0,904,4888,5638,6580,8134,
#Deleted in new
chr9	137587012	137589106	chr9:137587012-137589106	0	-	137587012	137587012	8553170	2	811,448,	0,1646,
#Partially deleted in new
chr9	137605653	137615358	chr9:137605653-137615358	3	+	137605717	137615138	789624	8	182,111,51,155,183,177,442,285,	0,7242,7806,7961,8378,8645,8905,9420,
#Partially deleted in new
chr9	137605684	137614314	chr9:137605684-137614314	0	+	137605684	137605684	8553170	6	151,111,88,155,183,16,	0,7211,7738,7930,8347,8614,
#Partially deleted in new
chr9	137605693	137614076	chr9:137605693-137614076	0	+	137605717	137614076	789624	5	142,111,51,155,96,	0,7202,7766,7921,8287,
#Partially deleted in new
chr9	137605695	137613741	chr9:137605695-137613741	0	+	137605717	137613149	789624	3	140,615,127,	0,7200,7919,
#Partially deleted in new
chr9	137605702	137614685	chr9:137605702-137614685	0	+	137605717	137614685	789624	7	133,111,51,155,75,177,127,	0,7193,7757,7912,8437,8596,8856,
#Partially deleted in new
chr9	137605728	137614211	chr9:137605728-137614211	0	+	137605728	137605728	8553170	4	107,111,51,597,	0,7167,7731,7886,
#Partially deleted in new
chr9	137605740	137614366	chr9:137605740-137614366	0	+	137605740	137605740	8553170	5	95,111,155,183,68,	0,7155,7874,8291,8558,
#Partially deleted in new
chr9	137605740	137614403	chr9:137605740-137614403	0	+	137605740	137605740	8553170	6	95,111,98,155,183,105,	0,7155,7672,7874,8291,8558,
#Partially deleted in new
chr9	137605743	137711018	chr9:137605743-137711018	3	+	137605743	137605743	8553170	2	92,52,	0,105223,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	137611450	137615359	chr9:137611450-137615359	0	+	137611450	137611450	8553170	5	1556,51,600,177,801,	0,2009,2164,2848,3108,
#Deleted in new
chr9	137612451	137614590	chr9:137612451-137614590	0	+	137612451	137612451	8553170	7	122,111,51,155,183,177,32,	0,444,1008,1163,1580,1847,2107,
#Deleted in new
chr9	137613280	137613770	chr9:137613280-137613770	0	+	137613280	137613280	8553170	2	230,156,	0,334,
#Partially deleted in new
chr9	137613678	137711013	chr9:137613678-137711013	0	+	137613678	137613678	8553170	2	91,47,	0,97288,
#Deleted in new
chr9	137614164	137615360	chr9:137614164-137615360	0	+	137614164	137614164	8553170	4	50,177,340,287,	0,134,394,909,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	137615331	137618813	chr9:137615331-137618813	3	-	137615331	137615331	789624	3	868,258,283,	0,2602,3199,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	137615366	137618831	chr9:137615366-137618831	1	-	137615366	137615366	8553170	2	766,1444,	0,2021,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	137615748	137618906	chr9:137615748-137618906	0	-	137615748	137615748	8553170	2	451,973,	0,2185,
#Partially deleted in new
chr9	137618962	137836127	chr9:137618962-137836127	3	+	137619028	137834953	0	27	87,64,557,181,158,189,78,121,132,146,144,227,174,83,107,123,102,105,155,168,145,78,116,87,79,176,1355,	0,92004,97663,109386,124408,124939,133368,135208,138917,143712,156146,157655,158919,160672,163328,171885,179850,181917,192498,194043,194423,195468,196984,198476,199097,215386,215810,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr9	137618991	137784393	chr9:137618991-137784393	1	+	137619028	137784150	0	16	58,64,557,181,158,189,78,121,132,146,144,227,174,83,107,288,	0,91975,97634,109357,124379,124910,133339,135179,138888,143683,156117,157626,158890,160643,163299,165114,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chr9	137618992	137792256	chr9:137618992-137792256	0	+	137619028	137716805	0	16	57,557,181,158,189,78,121,132,146,144,227,174,83,107,123,202,	0,97633,109356,124378,124909,133338,135178,138887,143682,156116,157625,158889,160642,163298,171855,173062,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	137619002	137717045	chr9:137619002-137717045	0	+	137716633	137717045	789624	4	47,178,64,420,	0,31857,91964,97623,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	137619006	137716953	chr9:137619006-137716953	0	+	137716633	137716953	789624	4	43,123,64,328,	0,18495,91960,97619,
#Partially deleted in new
chr9	137619009	137646395	chr9:137619009-137646395	0	+	137619009	137619009	8553170	2	40,60,	0,27326,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chr9	137619012	137764757	chr9:137619012-137764757	1	+	137619028	137762844	789624	10	37,64,557,181,158,189,78,121,132,2083,	0,91954,97613,109336,124358,124889,133318,135158,138867,143662,
#Partially deleted in new
chr9	137620046	137711030	chr9:137620046-137711030	0	+	137620046	137620046	8553170	2	22,64,	0,90920,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chr9	137638127	137638408	chr9:137638127-137638408	3	-	137638127	137638127	8553170	1	281,	0,
#Partially deleted in new
chr9	137640985	137641547	chr9:137640985-137641547	7	-	137640985	137640985	16724991	1	562,	0,
#Partially deleted in new
chr9	137646376	137711004	chr9:137646376-137711004	0	+	137646376	137646376	8553170	2	62,38,	0,64590,
#Partially deleted in new
chr9	137664905	137711006	chr9:137664905-137711006	0	+	137664905	137664905	8553170	2	60,40,	0,46061,
#Partially deleted in new
chr9	137665955	137813409	chr9:137665955-137813409	0	+	137716633	137813409	789624	21	97,64,557,181,137,189,78,121,132,146,144,227,174,83,107,123,102,105,155,168,24,	0,45011,50670,62393,77436,77946,86375,88215,91924,96719,109153,110662,111926,113679,116335,124892,132857,134924,145505,147050,147430,
#Partially deleted in new
chr9	137667006	137717050	chr9:137667006-137717050	0	+	137716633	137717050	789624	3	221,64,425,	0,43960,49619,
#Partially deleted in new
chr9	137667349	137728400	chr9:137667349-137728400	0	+	137667362	137728400	789624	4	145,64,557,52,	0,43617,49276,60999,
#Partially deleted in new
chr9	137674896	137710993	chr9:137674896-137710993	0	+	137674896	137674896	8553170	2	73,27,	0,36070,
#Partially deleted in new
chr9	137675185	137836100	chr9:137675185-137836100	1	+	137716633	137834953	789624	27	26,64,557,181,158,189,78,121,132,146,144,227,174,83,107,123,102,105,155,168,145,78,116,87,79,176,1328,	0,35781,41440,53163,68185,68716,77145,78985,82694,87489,99923,101432,102696,104449,107105,115662,123627,125694,136275,137820,138200,139245,140761,142253,142874,159163,159587,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	137676102	137717037	chr9:137676102-137717037	0	+	137716633	137717037	789624	3	406,64,412,	0,34864,40523,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	137680897	137711030	chr9:137680897-137711030	0	+	137680897	137680897	8553170	2	25,64,	0,30069,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	137685287	137711018	chr9:137685287-137711018	0	+	137685287	137685287	8553170	2	48,52,	0,25679,
#Partially deleted in new
chr9	137710969	137834442	chr9:137710969-137834442	0	+	137710969	137728564	789624	24	61,557,245,158,189,78,121,132,146,144,227,174,83,107,123,102,105,155,168,145,78,116,700,94,	0,5656,17379,32401,32932,41361,43201,46910,51705,64139,65648,66912,68665,71321,79878,87843,89910,100491,102036,102416,103461,104977,106469,123379,
#Partially deleted in new
chr9	137711000	137764701	chr9:137711000-137764701	0	+	137711000	137764165	789624	10	30,557,181,158,189,78,121,132,146,575,	0,5625,17348,32370,32901,41330,43170,46879,51674,53126,
#Partially deleted in new
chr9	137711021	137757904	chr9:137711021-137757904	0	+	137711021	137757904	789624	8	9,557,181,137,189,78,121,25,	0,5604,17327,32370,32880,41309,43149,46858,
#Partially deleted in new
chr9	137716926	137777946	chr9:137716926-137777946	0	+	137716926	137717263	789624	10	347,181,158,189,121,132,146,144,227,65,	0,11422,26444,26975,37244,40953,45748,58182,59691,60955,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	137738606	137754221	chr9:137738606-137754221	0	+	137738606	137738606	8553170	5	173,158,189,78,51,	0,4764,5295,13724,15564,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	137742956	137747964	chr9:137742956-137747964	1	+	137743423	137745559	789624	4	144,158,189,2492,	0,414,945,2516,
#Partially deleted in new
chr9	137742965	137745602	chr9:137742965-137745602	1	+	137743423	137745559	789624	4	135,137,189,130,	0,426,936,2507,
#Partially deleted in new
chr9	137743173	137776840	chr9:137743173-137776840	0	+	137743249	137776840	789624	9	89,137,189,78,121,132,146,144,223,	0,218,728,9157,10997,14706,19501,31935,33444,
#Partially deleted in new
chr9	137743376	137762769	chr9:137743376-137762769	0	+	137743376	137762769	789624	5	152,189,121,132,95,	0,525,10794,14503,19298,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chr9	137744063	137870016	chr9:137744063-137870016	0	+	137744063	137846574	789624	22	27,78,121,132,146,144,227,174,83,107,123,102,105,155,168,145,78,116,87,79,107,5338,	0,8267,10107,13816,18611,31045,32554,33818,35571,38227,46784,54749,56816,67397,68942,69322,70367,71883,73375,73996,102496,120615,
#Partially deleted in new
chr9	137754230	137776781	chr9:137754230-137776781	0	+	137754230	137776781	789624	4	61,132,146,164,	0,3649,8444,22387,
#Partially deleted in new
chr9	137776538	137789235	chr9:137776538-137789235	7	-	137776538	137776538	16724991	2	850,1060,	0,11637,
#Partially deleted in new
chr9	137777969	137834912	chr9:137777969-137834912	0	+	137777969	137814289	789624	15	86,83,107,123,102,105,155,168,145,258,116,87,79,176,140,	0,1665,4321,12878,20843,22910,33491,35036,35416,36281,37977,39469,40090,56379,56803,
#Partially deleted in new
chr9	137782337	137811491	chr9:137782337-137811491	0	+	137782337	137802928	789624	6	60,123,102,105,154,31,	0,8510,16475,18542,20519,29123,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	137784072	137788193	chr9:137784072-137788193	4	-	137784072	137784072	16724991	3	2708,147,18,	0,2985,4103,
#Deleted in new
chr9	137787664	137788690	chr9:137787664-137788690	5	-	137787664	137787664	16724991	1	1026,	0,
#Partially deleted in new
chr9	137788763	137803195	chr9:137788763-137803195	1	+	137790895	137802450	789624	5	65,123,102,105,787,	0,2084,10049,12116,13645,
#Partially deleted in new
chr9	137788810	137803199	chr9:137788810-137803199	1	+	137790895	137802928	789624	5	18,123,102,105,343,	0,2037,10002,12069,14046,
#Partially deleted in new
chr9	137790883	137795092	chr9:137790883-137795092	0	+	137790883	137790883	8553170	2	87,13,	0,4196,
#Partially deleted in new
chr9	137790887	137813444	chr9:137790887-137813444	0	+	137790887	137803279	789624	7	83,102,105,109,155,168,59,	0,7925,9992,12356,20573,22118,22498,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	137795117	137798841	chr9:137795117-137798841	0	+	137795117	137795117	8553170	2	71,29,	0,3695,
#Deleted in new
chr9	137798849	137800413	chr9:137798849-137800413	0	+	137798849	137798849	8553170	2	65,35,	0,1529,
#Partially deleted in new
chr9	137800442	137815951	chr9:137800442-137815951	0	+	137800442	137800442	8553170	7	133,105,155,168,145,78,5,	0,437,11018,12563,12943,13988,15504,
#Deleted in new
chr9	137813490	137814827	chr9:137813490-137814827	0	+	137813490	137813490	8553170	2	40,397,	0,940,
#Deleted in new
chr9	137814459	137815373	chr9:137814459-137815373	0	+	137814459	137814459	8553170	2	49,51,	0,863,
#Deleted in new
chr9	137814565	137815983	chr9:137814565-137815983	0	+	137814565	137814565	8553170	2	63,37,	0,1381,
#Partially deleted in new
chr9	137815335	137835741	chr9:137815335-137835741	0	+	137815335	137815335	8553170	5	727,87,79,176,969,	0,2103,2724,19013,19437,
#Deleted in new
chr9	137815577	137815981	chr9:137815577-137815981	0	+	137815577	137815577	8553170	2	65,35,	0,369,
#Partially deleted in new
chr9	137815751	137836081	chr9:137815751-137836081	0	+	137815751	137815751	8553170	5	311,131,79,176,1309,	0,1643,2308,18597,19021,
#Deleted in new
chr9	137815999	137816497	chr9:137815999-137816497	0	+	137815999	137815999	8553170	2	63,37,	0,461,
#Partially deleted in new
chr9	137816340	137836114	chr9:137816340-137836114	0	+	137816340	137816340	8553170	4	1185,79,176,1342,	0,1719,18008,18432,
#Deleted in new
chr9	137816356	137817511	chr9:137816356-137817511	0	+	137816356	137816356	8553170	2	27,73,	0,1082,
#Deleted in new
chr9	137817933	137818136	chr9:137817933-137818136	0	+	137817933	137817933	8553170	2	23,77,	0,126,
#Deleted in new
chr9	137818112	137820114	chr9:137818112-137820114	0	+	137818112	137818112	8553170	2	26,74,	0,1928,
#Partially deleted in new
chr9	137832631	137834992	chr9:137832631-137834992	0	+	137832631	137832631	8553170	3	312,176,220,	0,1717,2141,
#Partially deleted in new
chr9	137832852	137834357	chr9:137832852-137834357	0	+	137832852	137832852	8553170	2	91,9,	0,1496,
#Deleted in new
chr9	137834078	137835082	chr9:137834078-137835082	0	+	137834078	137834078	8553170	2	446,310,	0,694,
#Deleted in new
chr9	137838418	137838516	chr9:137838418-137838516	3	+	137838418	137838418	5263520	1	98,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	137867924	137892570	chr9:137867924-137892570	3	-	137867924	137867924	789624	4	313,218,166,2525,	0,7538,14912,22121,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	137867926	137874214	chr9:137867926-137874214	0	-	137867926	137867926	8553170	2	311,151,	0,6137,
#Partially deleted in new
chr9	137877788	138122179	chr9:137877788-138122179	1	+	137877933	138121880	789624	46	429,106,140,92,153,191,104,116,57,90,210,113,113,132,73,118,68,107,801,218,127,130,60,107,97,161,138,202,165,111,88,119,66,92,145,128,97,109,108,113,128,136,117,208,251,524,	0,1265,4955,35391,36865,39452,74485,77909,78982,79809,93594,98118,106349,108624,108993,128978,132221,135340,145222,147166,165985,169115,169610,171420,174303,176057,179943,180260,180780,181290,181865,195697,196212,198030,200325,218695,224922,227910,234609,236589,237763,240157,240863,242376,242842,243867,
#Partially deleted in new
chr9	137877788	138122179	chr9:137877788-138122179	1	+	137877933	138121880	0	47	429,106,140,92,153,191,104,116,57,90,210,113,113,132,73,118,68,107,801,218,127,130,60,107,97,161,138,202,165,111,84,6,117,66,92,145,128,97,109,108,113,128,136,117,208,251,524,	0,1265,4955,35391,36865,39452,74485,77909,78982,79809,93594,98118,106349,108624,108993,128978,132221,135340,145222,147166,165985,169115,169610,171420,174303,176057,179943,180260,180780,181290,181865,191969,195699,196212,198030,200325,218695,224922,227910,234609,236589,237763,240157,240863,242376,242842,243867,
#Partially deleted in new
chr9	137877788	138124624	chr9:137877788-138124624	3	+	137877933	138121999	0	47	429,106,140,92,153,191,104,116,57,90,210,113,113,132,73,118,68,107,801,218,127,130,60,107,97,161,138,202,165,111,84,6,117,66,92,145,128,97,109,108,113,128,136,117,208,251,3156,	0,1265,4955,35391,36865,39452,74485,77909,78982,79809,93594,98118,106349,108624,108993,128978,132221,135340,145222,147166,165985,169115,169610,171420,174303,176057,179943,180260,180780,181290,181865,191969,195699,196212,198030,200325,218695,224922,227910,234609,236589,237763,240157,240863,242376,242842,243680,
#Partially deleted in new
chr9	137877814	138124624	chr9:137877814-138124624	1	+	137877933	138121999	789624	46	403,106,140,92,153,191,104,116,57,90,210,113,113,132,73,118,68,107,801,218,127,130,60,107,97,161,138,202,165,111,84,117,66,92,145,128,97,109,108,113,128,136,117,208,251,3156,	0,1239,4929,35365,36839,39426,74459,77883,78956,79783,93568,98092,106323,108598,108967,128952,132195,135314,145196,147140,165959,169089,169584,171394,174277,176031,179917,180234,180754,181264,181839,195673,196186,198004,200299,218669,224896,227884,234583,236563,237737,240131,240837,242350,242816,243654,
#Partially deleted in new
chr9	137877933	138124623	chr9:137877933-138124623	1	+	137877933	138121999	789624	47	285,105,140,92,153,191,104,116,57,93,210,113,113,132,73,118,68,107,801,218,127,130,60,107,97,161,138,202,165,111,84,6,117,66,92,145,128,97,109,108,113,128,136,117,208,251,3155,	0,1121,4810,35246,36720,39307,74340,77764,78837,79661,93449,97973,106204,108479,108848,128833,132076,135195,145077,147021,165840,168970,169465,171275,174158,175912,179798,180115,180635,181145,181720,191824,195554,196067,197885,200180,218550,224777,227765,234464,236444,237618,240012,240718,242231,242697,243535,
#Partially deleted in new
chr9	137877933	138124624	chr9:137877933-138124624	1	+	137877933	138121999	789624	46	284,106,140,92,153,191,104,116,57,93,210,113,113,132,73,118,68,107,801,218,127,130,60,107,97,161,138,202,165,111,84,117,66,92,145,128,97,109,108,113,128,136,117,208,251,3156,	0,1120,4810,35246,36720,39307,74340,77764,78837,79661,93449,97973,106204,108479,108848,128833,132076,135195,145077,147021,165840,168970,169465,171275,174158,175912,179798,180115,180635,181145,181720,195554,196067,197885,200180,218550,224777,227765,234464,236444,237618,240012,240718,242231,242697,243535,
#Partially deleted in new
chr9	138075868	138105778	chr9:138075868-138105778	0	+	138075868	138105778	789624	5	42,145,128,97,80,	0,2245,20615,25235,29830,
#Deleted in new
chr9	138129398	138129526	chr9:138129398-138129526	7	+	138129398	138129398	16724991	1	128,	0,
#Deleted in new
chr9	138137094	138143864	chr9:138137094-138143864	7	+	138137094	138137094	16724991	8	115,105,178,124,184,106,85,316,	0,535,753,1332,2118,2880,4351,6454,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chr9	138150074	138174700	chr9:138150074-138174700	7	+	138150074	138150074	16724991	2	234,331,	0,24295,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chr9	138150112	138176508	chr9:138150112-138176508	4	+	138150112	138150112	16724991	5	196,827,109,301,302,	0,23933,25250,25488,26094,
#Deleted in new
chr9	138174984	138177433	chr9:138174984-138177433	5	+	138174984	138174984	16724991	4	116,109,111,1227,	0,378,616,1222,
#Deleted in new
chr9	138175044	138177264	chr9:138175044-138177264	5	+	138175044	138175044	16724991	4	56,109,111,1058,	0,318,556,1162,
#Deleted in new
chr9	138177425	138179774	chr9:138177425-138179774	7	-	138177425	138177425	16724991	6	75,111,95,128,253,210,	0,611,1095,1618,1835,2139,
#Partially deleted in new
chr9	138199932	138203325	chr9:138199932-138203325	3	-	138199932	138199932	789624	2	350,188,	0,3205,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chr9	138217067	138252994	chr9:138217067-138252994	7	+	138217067	138217067	16724991	9	163,547,196,110,132,216,66,59,306,	0,3714,13840,26552,27726,31148,32247,34470,35621,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chr9	138217070	138220998	chr9:138217070-138220998	4	+	138217070	138217070	16724991	3	160,112,217,	0,1528,3711,
#Partially deleted in new
chr9	138221143	138243722	chr9:138221143-138243722	4	+	138221143	138221143	16724991	4	185,196,88,103,	0,9764,12595,22476,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chr9	138243619	138253217	chr9:138243619-138253217	5	+	138243619	138243619	16724991	4	110,66,104,78,	0,5695,9069,9520,
#Deleted in new
chr9	138259594	138259698	chr9:138259594-138259698	3	+	138259594	138259594	8553170	1	104,	0,
#Deleted in new
chr9	138286247	138286430	chr9:138286247-138286430	7	+	138286247	138286247	16724991	1	183,	0,
#Deleted in new
chr9_GL383539v1_alt	62863	64139	chr9_GL383539v1_alt:62863-64139	7	-	62863	62863	16724991	1	1276,	0,
#Deleted in new
chr9_GL383540v1_alt	4773	6120	chr9_GL383540v1_alt:4773-6120	7	-	4773	4773	16724991	2	69,141,	0,1206,
#Deleted in new
chr9_GL383540v1_alt	21984	70597	chr9_GL383540v1_alt:21984-70597	3	-	25780	70597	789624	11	3868,141,120,213,180,186,87,33,146,40,96,	0,5005,13465,22053,24591,28716,29522,30625,40292,44125,48517,
#Deleted in new
chr9_GL383540v1_alt	22700	23174	chr9_GL383540v1_alt:22700-23174	0	-	22700	22700	8553170	2	304,94,	0,380,
#Deleted in new
chr9_GL383540v1_alt	50732	62402	chr9_GL383540v1_alt:50732-62402	0	-	50732	62402	789624	3	154,87,126,	0,774,11544,
#Deleted in new
chr9_GL383540v1_alt	55126	59976	chr9_GL383540v1_alt:55126-59976	0	-	55126	55126	8553170	1	4850,	0,
#Deleted in new
chr9_GL383540v1_alt	66919	68807	chr9_GL383540v1_alt:66919-68807	3	+	66919	66919	8553170	2	125,91,	0,1797,
#Deleted in new
chr9_GL383541v1_alt	19468	152599	chr9_GL383541v1_alt:19468-152599	3	+	20085	152599	789624	11	651,114,272,85,138,257,94,141,266,94,153,	0,1003,64630,66139,69414,82578,87938,96564,99970,131203,132978,
#Deleted in new
chr9_GL383541v1_alt	63184	89754	chr9_GL383541v1_alt:63184-89754	3	-	63184	63184	8553170	3	334,176,112,	0,1022,26458,
#Deleted in new
chr9_GL383541v1_alt	129007	157800	chr9_GL383541v1_alt:129007-157800	3	-	129007	129007	789624	4	1108,231,87,78,	0,4379,23998,28715,
#Deleted in new
chr9_GL383541v1_alt	129007	133415	chr9_GL383541v1_alt:129007-133415	1	-	129007	129007	8553170	3	194,94,29,	0,1014,4379,
#Deleted in new
chr9_GL383541v1_alt	150584	152750	chr9_GL383541v1_alt:150584-152750	0	+	150584	150584	8553170	2	181,304,	0,1862,
#Deleted in new
chr9_GL383541v1_alt	151610	157856	chr9_GL383541v1_alt:151610-157856	0	-	151610	151610	8553170	3	1482,306,134,	0,2917,6112,
#Deleted in new
chr9_GL383541v1_alt	153966	154735	chr9_GL383541v1_alt:153966-154735	1	-	153966	153966	8553170	2	131,208,	0,561,
#Deleted in new
chr9_GL383541v1_alt	170538	170718	chr9_GL383541v1_alt:170538-170718	3	-	170538	170538	8553170	1	180,	0,
#Deleted in new
chr9_GL383542v1_alt	1622	2363	chr9_GL383542v1_alt:1622-2363	7	+	1622	1622	16724991	1	741,	0,
#Deleted in new
chr9_GL383542v1_alt	8688	11156	chr9_GL383542v1_alt:8688-11156	7	-	8688	8688	16724991	3	930,1065,95,	0,1246,2373,
#Deleted in new
chr9_KI270823v1_alt	26870	27885	chr9_KI270823v1_alt:26870-27885	7	+	26870	26870	16724991	1	1015,	0,
#Deleted in new
chr9_KI270823v1_alt	79911	376338	chr9_KI270823v1_alt:79911-376338	3	+	236697	375260	789624	8	394,108,189,133,251,177,132,1111,	0,156741,241171,257395,280502,284089,288656,295316,
#Deleted in new
chr9_KI270823v1_alt	176638	177124	chr9_KI270823v1_alt:176638-177124	7	-	176638	176638	16724991	1	486,	0,
#Deleted in new
chr9_KI270823v1_alt	182724	337363	chr9_KI270823v1_alt:182724-337363	0	+	236697	337363	789624	4	118,108,189,57,	0,53928,138358,154582,
#Deleted in new
chr9_KI270823v1_alt	236237	376334	chr9_KI270823v1_alt:236237-376334	1	+	236697	375260	789624	8	221,108,189,133,251,177,132,1107,	0,415,84845,101069,124176,127763,132330,138990,
#Deleted in new
chr9_KI270823v1_alt	236237	239229	chr9_KI270823v1_alt:236237-239229	0	+	236237	236237	8553170	3	221,108,757,	0,415,2235,
#Deleted in new
chr9_KI270823v1_alt	321004	364097	chr9_KI270823v1_alt:321004-364097	0	+	321067	364097	789624	4	267,133,251,97,	0,16302,39409,42996,
#Deleted in new
chr9_KI270823v1_alt	373679	373736	chr9_KI270823v1_alt:373679-373736	3	+	373679	373679	8553170	1	57,	0,
#Deleted in new
chr9_KI270823v1_alt	385286	390576	chr9_KI270823v1_alt:385286-390576	7	-	385286	385286	16724991	3	613,149,463,	0,3674,4827,
#Deleted in new
chr9_KI270823v1_alt	407699	408078	chr9_KI270823v1_alt:407699-408078	7	-	407699	407699	16724991	1	379,	0,
#Deleted in new
chr9_KI270823v1_alt	419727	422034	chr9_KI270823v1_alt:419727-422034	7	+	419727	419727	16724991	3	475,652,453,	0,775,1854,
#Deleted in new
chr9_KI270823v1_alt	422295	432266	chr9_KI270823v1_alt:422295-432266	3	-	423219	432195	789624	3	1512,203,537,	0,6615,9434,
#Deleted in new
chr9_KI270823v1_alt	436134	437394	chr9_KI270823v1_alt:436134-437394	7	-	436134	436134	16724991	2	281,640,	0,620,
#Deleted in new
chr9_KN196479v1_fix	31222	35187	chr9_KN196479v1_fix:31222-35187	1	-	31863	35145	789624	7	135,24,102,111,71,134,114,	0,640,1038,1949,2856,3192,3851,
#Deleted in new
chr9_KN196479v1_fix	31222	35187	chr9_KN196479v1_fix:31222-35187	0	-	31222	31222	789624	6	135,24,102,111,71,114,	0,640,1038,1949,2856,3851,
#Deleted in new
chr9_KN196479v1_fix	31222	35187	chr9_KN196479v1_fix:31222-35187	0	-	32358	35145	789624	8	135,24,102,111,106,71,134,114,	0,640,1038,1949,2563,2856,3192,3851,
#Deleted in new
chr9_KN196479v1_fix	31225	35196	chr9_KN196479v1_fix:31225-35196	3	-	31863	35145	789624	7	396,24,102,111,71,134,123,	0,637,1035,1946,2853,3189,3848,
#Deleted in new
chr9_KN196479v1_fix	31263	35173	chr9_KN196479v1_fix:31263-35173	1	-	31274	35145	8553170	8	92,3,24,167,111,71,134,100,	0,94,599,997,1908,2815,3151,3810,
#Deleted in new
chr9_KN196479v1_fix	50850	54537	chr9_KN196479v1_fix:50850-54537	7	-	50850	50850	16724991	6	42,102,69,71,131,90,	0,244,1235,1868,3016,3597,
#Deleted in new
chr9_KN196479v1_fix	81268	101308	chr9_KN196479v1_fix:81268-101308	1	-	81758	101283	789624	7	1181,135,36,48,57,70,53,	0,2233,2922,4644,6143,6924,19987,
#Deleted in new
chr9_KN196479v1_fix	81268	101308	chr9_KN196479v1_fix:81268-101308	3	-	81758	101283	789624	7	1181,135,36,48,57,70,53,	0,2233,2922,4644,6143,6924,19987,
#Deleted in new
chr9_KN196479v1_fix	81697	101283	chr9_KN196479v1_fix:81697-101283	1	-	81697	101283	8553170	8	66,685,135,36,48,57,70,28,	0,67,1804,2493,4215,5714,6495,19558,
#Deleted in new
chr9_KN196479v1_fix	81697	101283	chr9_KN196479v1_fix:81697-101283	1	-	81697	101283	8553170	8	66,685,135,36,48,57,70,28,	0,67,1804,2493,4215,5714,6495,19558,
#Deleted in new
chr9_KN196479v1_fix	128563	128657	chr9_KN196479v1_fix:128563-128657	3	+	128563	128563	8553170	1	94,	0,
#Deleted in new
chr9_KN196479v1_fix	143887	144563	chr9_KN196479v1_fix:143887-144563	7	+	143887	143887	16724991	2	91,132,	0,544,
#Deleted in new
chr9_KN196479v1_fix	154867	162492	chr9_KN196479v1_fix:154867-162492	3	-	157962	162226	789624	5	3575,213,89,210,360,	0,3774,4944,5618,7265,
#Deleted in new
chr9_KN196479v1_fix	157899	159033	chr9_KN196479v1_fix:157899-159033	0	-	157899	157899	8553170	2	543,392,	0,742,
#Deleted in new
chr9_KN196479v1_fix	163821	163918	chr9_KN196479v1_fix:163821-163918	3	-	163821	163821	8553170	1	97,	0,
#Deleted in new
chr9_KN196479v1_fix	164416	173797	chr9_KN196479v1_fix:164416-173797	3	-	167598	172756	789624	5	3372,209,81,161,544,	0,5802,6849,8217,8837,
#Deleted in new
chr9_KN196479v1_fix	165083	165559	chr9_KN196479v1_fix:165083-165559	7	+	165083	165083	16724991	1	476,	0,
#Deleted in new
chr9_KN196479v1_fix	166998	174211	chr9_KN196479v1_fix:166998-174211	1	-	170208	172756	789624	4	3429,81,161,196,	0,4267,5635,7017,
#Deleted in new
chr9_KN196479v1_fix	166998	174211	chr9_KN196479v1_fix:166998-174211	1	-	167598	172756	789624	5	790,209,81,161,196,	0,3220,4267,5635,7017,
#Deleted in new
chr9_KN196479v1_fix	166999	173873	chr9_KN196479v1_fix:166999-173873	1	-	170208	172756	789624	4	3428,81,161,216,	0,4266,5634,6658,
#Deleted in new
chr9_KN196479v1_fix	169783	174169	chr9_KN196479v1_fix:169783-174169	0	-	169783	169783	8553170	3	644,81,154,	0,1482,4232,
#Deleted in new
chr9_KN196479v1_fix	169840	174211	chr9_KN196479v1_fix:169840-174211	1	-	170208	172756	8553170	4	587,63,161,176,	0,1443,2793,4195,
#Deleted in new
chr9_KN196479v1_fix	170218	174116	chr9_KN196479v1_fix:170218-174116	0	-	170218	172756	8553170	4	209,81,161,109,	0,1047,2415,3789,
#Deleted in new
chr9_KN196479v1_fix	170226	174217	chr9_KN196479v1_fix:170226-174217	0	-	170226	172756	8553170	4	201,81,161,89,	0,1039,2407,3902,
#Deleted in new
chr9_KN196479v1_fix	170298	174225	chr9_KN196479v1_fix:170298-174225	0	-	170298	172756	8553170	4	129,81,161,190,	0,967,2335,3737,
#Deleted in new
chr9_KN196479v1_fix	172500	174212	chr9_KN196479v1_fix:172500-174212	0	-	172500	172500	8553170	2	294,197,	0,1515,
#Deleted in new
chr9_KN196479v1_fix	174307	177520	chr9_KN196479v1_fix:174307-177520	1	+	174337	177460	0	8	33,121,150,141,80,131,70,165,	0,708,1337,1698,2026,2383,2788,3048,
#Deleted in new
chr9_KN196479v1_fix	174311	177520	chr9_KN196479v1_fix:174311-177520	0	+	174311	174311	8553170	7	29,121,150,141,488,70,165,	0,704,1333,1694,2022,2784,3044,
#Deleted in new
chr9_KN196479v1_fix	174311	176789	chr9_KN196479v1_fix:174311-176789	0	+	174311	174311	8553170	6	356,121,150,141,80,99,	0,704,1333,1694,2022,2379,
#Deleted in new
chr9_KN196479v1_fix	174345	176412	chr9_KN196479v1_fix:174345-176412	0	+	174827	176412	8553170	5	566,121,150,141,79,	0,670,1299,1660,1988,
#Deleted in new
chr9_KN196479v1_fix	174345	177466	chr9_KN196479v1_fix:174345-177466	0	+	174345	174345	8553170	8	137,121,150,141,80,131,70,111,	0,670,1299,1660,1988,2345,2750,3010,
#Deleted in new
chr9_KN196479v1_fix	175015	177520	chr9_KN196479v1_fix:175015-177520	3	+	175687	177460	8553170	7	121,61,52,80,131,70,165,	0,629,1079,1318,1675,2080,2340,
#Deleted in new
chr9_KN196479v1_fix	175015	176477	chr9_KN196479v1_fix:175015-176477	0	+	175015	175015	8553170	3	121,150,472,	0,629,990,
#Deleted in new
chr9_KN196479v1_fix	175030	177479	chr9_KN196479v1_fix:175030-177479	0	+	175030	175030	8553170	7	106,314,141,80,131,70,124,	0,450,975,1303,1660,2065,2325,
#Deleted in new
chr9_KN196479v1_fix	175489	175564	chr9_KN196479v1_fix:175489-175564	3	+	175489	175489	789624	1	75,	0,
#Deleted in new
chr9_KN196479v1_fix	176188	176262	chr9_KN196479v1_fix:176188-176262	3	+	176188	176188	789624	1	74,	0,
#Deleted in new
chr9_KN196479v1_fix	176549	176622	chr9_KN196479v1_fix:176549-176622	3	+	176549	176549	789624	1	73,	0,
#Deleted in new
chr9_KN196479v1_fix	176774	177487	chr9_KN196479v1_fix:176774-177487	3	-	176774	177487	789624	3	47,67,135,	0,321,578,
#Deleted in new
chr9_KN196479v1_fix	176774	177487	chr9_KN196479v1_fix:176774-177487	1	-	176774	177487	789624	3	47,67,135,	0,321,578,
#Deleted in new
chr9_KN196479v1_fix	176940	177006	chr9_KN196479v1_fix:176940-177006	3	+	176940	176940	789624	1	66,	0,
#Deleted in new
chr9_KN196479v1_fix	176943	177507	chr9_KN196479v1_fix:176943-177507	0	+	176943	176943	8553170	2	222,152,	0,412,
#Deleted in new
chr9_KN196479v1_fix	177848	182579	chr9_KN196479v1_fix:177848-182579	3	-	178006	182547	789624	9	228,82,163,73,192,83,134,52,86,	0,306,691,939,1994,2904,3069,4514,4645,
#Deleted in new
chr9_KN196479v1_fix	177898	182579	chr9_KN196479v1_fix:177898-182579	1	-	178006	180030	789624	8	178,82,163,73,192,83,134,86,	0,256,641,889,1944,2854,3019,4595,
#Deleted in new
chr9_KN196479v1_fix	177968	180347	chr9_KN196479v1_fix:177968-180347	0	-	177968	177968	8553170	5	108,82,163,73,505,	0,186,571,819,1874,
#Deleted in new
chr9_KN196479v1_fix	178006	182414	chr9_KN196479v1_fix:178006-182414	0	-	178006	178006	8553170	8	70,82,163,37,192,83,134,52,	0,148,533,781,1836,2746,2911,4356,
#Deleted in new
chr9_KN196479v1_fix	182198	182770	chr9_KN196479v1_fix:182198-182770	0	-	182198	182198	8553170	2	216,277,	0,295,
#Deleted in new
chr9_KN196479v1_fix	182645	187263	chr9_KN196479v1_fix:182645-187263	3	+	182686	187233	789624	6	119,155,104,180,170,114,	0,362,1159,3398,3713,4504,
#Deleted in new
chr9_KN196479v1_fix	182671	186201	chr9_KN196479v1_fix:182671-186201	0	+	182671	182671	8553170	4	93,321,104,158,	0,336,1133,3372,
#Deleted in new
chr9_KN196479v1_fix	183141	186118	chr9_KN196479v1_fix:183141-186118	0	+	183141	183141	8553170	3	135,104,75,	0,663,2902,
#Deleted in new
chr9_KN196479v1_fix	187542	202193	chr9_KN196479v1_fix:187542-202193	1	-	189586	202063	789624	6	2311,187,44,77,187,178,	0,3391,4536,5150,5810,14473,
#Deleted in new
chr9_KN196479v1_fix	187543	202260	chr9_KN196479v1_fix:187543-202260	1	-	189586	193458	789624	7	2310,187,44,77,187,150,245,	0,3390,4535,5149,5809,13789,14472,
#Deleted in new
chr9_KN196479v1_fix	187543	202260	chr9_KN196479v1_fix:187543-202260	1	-	189586	193458	789624	6	2310,187,44,77,285,245,	0,3390,4535,5149,5809,14472,
#Deleted in new
chr9_KN196479v1_fix	187543	202260	chr9_KN196479v1_fix:187543-202260	1	-	189822	202063	789624	5	2310,44,77,187,245,	0,4535,5149,5809,14472,
#Deleted in new
chr9_KN196479v1_fix	188961	202193	chr9_KN196479v1_fix:188961-202193	3	-	189557	202063	789624	6	608,112,44,77,187,178,	0,2047,3117,3731,4391,13054,
#Deleted in new
chr9_KN196479v1_fix	189546	192171	chr9_KN196479v1_fix:189546-192171	0	-	189546	189546	8553170	2	307,93,	0,2532,
#Deleted in new
chr9_KN196479v1_fix	189648	202085	chr9_KN196479v1_fix:189648-202085	0	-	189648	189648	8553170	5	205,187,44,187,70,	0,1285,2430,3704,12367,
#Deleted in new
chr9_KN196479v1_fix	189888	202137	chr9_KN196479v1_fix:189888-202137	1	-	189968	202063	8553170	6	98,187,44,77,187,122,	0,1045,2190,2804,3464,12127,
#Deleted in new
chr9_KN196479v1_fix	191062	202104	chr9_KN196479v1_fix:191062-202104	0	-	191062	191062	8553170	5	58,44,77,285,89,	0,1016,1630,2290,10953,
#Deleted in new
chr9_KN196479v1_fix	202460	232190	chr9_KN196479v1_fix:202460-232190	3	+	202567	231515	789624	18	194,87,45,75,102,71,116,119,164,131,84,117,141,135,129,129,141,845,	0,2669,7489,9250,11080,13159,14314,17924,19233,20797,21605,24046,25371,26511,27333,27553,28422,28885,
#Deleted in new
chr9_KN196479v1_fix	205131	210649	chr9_KN196479v1_fix:205131-210649	0	+	205131	205131	8553170	2	85,700,	0,4818,
#Deleted in new
chr9_KN196479v1_fix	205150	210849	chr9_KN196479v1_fix:205150-210849	0	+	205150	205150	8553170	3	66,45,155,	0,4799,5544,
#Deleted in new
chr9_KN196479v1_fix	217407	217784	chr9_KN196479v1_fix:217407-217784	7	-	217407	217407	16724991	2	306,69,	0,308,
#Deleted in new
chr9_KN196479v1_fix	219964	221898	chr9_KN196479v1_fix:219964-221898	0	+	219964	219964	8553170	2	539,205,	0,1729,
#Deleted in new
chr9_KN196479v1_fix	220880	222177	chr9_KN196479v1_fix:220880-222177	0	+	220880	220880	8553170	2	33,484,	0,813,
#Deleted in new
chr9_KN196479v1_fix	232152	244190	chr9_KN196479v1_fix:232152-244190	3	-	233046	243938	789624	6	1014,75,75,89,169,477,	0,1748,2709,4926,8606,11561,
#Deleted in new
chr9_KN196479v1_fix	232155	244138	chr9_KN196479v1_fix:232155-244138	1	-	233046	243938	789624	8	1011,75,75,89,194,144,347,425,	0,1745,2706,4923,6237,6716,8603,11558,
#Deleted in new
chr9_KN196479v1_fix	233099	244071	chr9_KN196479v1_fix:233099-244071	0	-	233099	243938	8553170	6	67,75,75,89,169,358,	0,801,1762,3979,7659,10614,
#Deleted in new
chr9_KN196479v1_fix	237097	244048	chr9_KN196479v1_fix:237097-244048	0	-	237097	237097	8553170	4	70,194,144,335,	0,1295,1774,6616,
#Deleted in new
chr9_KN196479v1_fix	238392	244053	chr9_KN196479v1_fix:238392-244053	0	-	238392	238392	8553170	4	194,144,169,340,	0,479,2366,5321,
#Deleted in new
chr9_KN196479v1_fix	238456	241994	chr9_KN196479v1_fix:238456-241994	0	-	238456	241051	8553170	4	130,144,347,239,	0,415,2302,3299,
#Deleted in new
chr9_KN196479v1_fix	240451	285480	chr9_KN196479v1_fix:240451-285480	0	+	240451	240451	789624	18	287,67,158,84,125,147,105,81,182,190,121,130,183,205,151,147,177,413,	0,8743,9963,11171,11580,11841,18230,25008,25986,30505,31341,34241,35425,40057,40927,41711,42185,44616,
#Deleted in new
chr9_KN196479v1_fix	248093	285480	chr9_KN196479v1_fix:248093-285480	1	+	248537	285274	0	29	549,67,158,84,125,147,138,163,105,152,64,127,149,121,81,182,136,130,186,190,121,130,183,205,319,147,177,185,413,	0,1101,2321,3529,3938,4199,6634,7939,10588,11378,11641,14829,15749,16246,17366,18344,20399,20614,21376,22863,23699,26599,27783,32415,33285,34069,34543,35910,36974,
#Deleted in new
chr9_KN196479v1_fix	248093	285496	chr9_KN196479v1_fix:248093-285496	3	+	254785	271067	8553170	26	549,67,158,84,125,147,138,163,105,152,64,127,149,121,81,182,190,121,130,183,205,151,147,177,185,429,	0,1101,2321,3529,3938,4199,6634,7939,10588,11378,11641,14829,15749,16246,17366,18344,22863,23699,26599,27783,32415,33285,34069,34543,35910,36974,
#Deleted in new
chr9_KN196479v1_fix	248417	276050	chr9_KN196479v1_fix:248417-276050	0	+	248537	256004	8553170	20	225,67,158,84,125,147,138,482,105,152,64,127,149,121,81,182,190,121,130,174,	0,777,1997,3205,3614,3875,6310,7376,10264,11054,11317,14505,15425,15922,17042,18020,22539,23375,26275,27459,
#Deleted in new
chr9_KN196479v1_fix	248417	285480	chr9_KN196479v1_fix:248417-285480	1	+	248537	285274	0	29	225,67,158,84,125,147,138,163,105,152,64,127,149,121,81,182,136,130,186,190,121,130,183,205,151,147,177,185,413,	0,777,1997,3205,3614,3875,6310,7615,10264,11054,11317,14505,15425,15922,17042,18020,20075,20290,21052,22539,23375,26275,27459,32091,32961,33745,34219,35586,36650,
#Deleted in new
chr9_KN196479v1_fix	248417	285480	chr9_KN196479v1_fix:248417-285480	1	+	248537	285274	0	29	225,67,158,84,125,147,138,70,105,152,64,127,149,121,81,182,136,130,186,190,121,130,183,205,151,147,177,185,413,	0,777,1997,3205,3614,3875,6310,7708,10264,11054,11317,14505,15425,15922,17042,18020,20075,20290,21052,22539,23375,26275,27459,32091,32961,33745,34219,35586,36650,
#Deleted in new
chr9_KN196479v1_fix	248417	256004	chr9_KN196479v1_fix:248417-256004	1	+	248537	256004	8553170	8	225,67,158,84,125,147,138,211,	0,777,1997,3205,3614,3875,6310,7376,
#Deleted in new
chr9_KN196479v1_fix	248418	274703	chr9_KN196479v1_fix:248418-274703	0	+	248537	259511	8553170	17	224,67,158,84,125,147,105,152,127,149,121,81,182,186,190,121,11,	0,776,1996,3204,3613,3874,10263,11053,14504,15424,15921,17041,18019,21051,22538,23374,26274,
#Deleted in new
chr9_KN196479v1_fix	281741	285480	chr9_KN196479v1_fix:281741-285480	1	+	282206	285274	8553170	5	152,147,177,185,413,	0,421,895,2262,3326,
#Deleted in new
chr9_KN196479v1_fix	286058	296881	chr9_KN196479v1_fix:286058-296881	1	+	286160	294805	789624	5	223,73,108,125,2225,	0,3518,7956,8375,8598,
#Deleted in new
chr9_KN196479v1_fix	286058	296881	chr9_KN196479v1_fix:286058-296881	1	+	286160	294805	789624	6	223,73,126,108,125,2225,	0,3518,5357,7956,8375,8598,
#Deleted in new
chr9_KN196479v1_fix	286060	296942	chr9_KN196479v1_fix:286060-296942	3	+	286160	294747	789624	4	221,73,108,2286,	0,3516,7954,8596,
#Deleted in new
chr9_KN196479v1_fix	286080	294713	chr9_KN196479v1_fix:286080-294713	0	+	286080	286080	8553170	6	201,73,124,126,108,57,	0,3496,5048,5335,7934,8576,
#Deleted in new
chr9_KN196479v1_fix	286080	296942	chr9_KN196479v1_fix:286080-296942	1	+	286160	294747	789624	5	201,73,126,108,2286,	0,3496,5335,7934,8576,
#Deleted in new
chr9_KN196479v1_fix	286091	291947	chr9_KN196479v1_fix:286091-291947	0	+	286091	286091	8553170	3	190,73,532,	0,3485,5324,
#Deleted in new
chr9_KN196479v1_fix	288264	294122	chr9_KN196479v1_fix:288264-294122	0	+	288276	294122	8553170	4	49,73,126,108,	0,1312,3151,5750,
#Deleted in new
chr9_KN196479v1_fix	297188	305190	chr9_KN196479v1_fix:297188-305190	1	-	298114	305153	789624	9	1082,146,109,153,212,100,207,163,129,	0,2010,2885,3866,4305,5142,5940,7159,7873,
#Deleted in new
chr9_KN196479v1_fix	297188	305231	chr9_KN196479v1_fix:297188-305231	1	-	298114	305153	789624	10	1082,146,186,109,153,212,100,207,163,170,	0,2010,2320,2885,3866,4305,5142,5940,7159,7873,
#Deleted in new
chr9_KN196479v1_fix	297188	305190	chr9_KN196479v1_fix:297188-305190	0	-	297188	297188	8553170	8	1082,146,674,153,212,100,207,843,	0,2010,2320,3866,4305,5142,5940,7159,
#Deleted in new
chr9_KN196479v1_fix	301493	305221	chr9_KN196479v1_fix:301493-305221	2	-	301493	305153	8553170	5	97,100,207,163,160,	0,837,1635,2854,3568,
#Deleted in new
chr9_KN196479v1_fix	301499	305169	chr9_KN196479v1_fix:301499-305169	0	-	301499	303293	8553170	4	91,182,207,108,	0,827,1629,3562,
#Deleted in new
chr9_KQ090018v1_alt	112042	112390	chr9_KQ090018v1_alt:112042-112390	7	+	112042	112042	16724991	1	348,	0,
#Deleted in new
chrM	576	647	chrM:576-647	3	+	576	576	8553170	1	71,	0,
#Deleted in new
chrM	647	1601	chrM:647-1601	3	+	647	647	789624	1	954,	0,
#Deleted in new
chrM	1601	1670	chrM:1601-1670	3	+	1601	1601	8553170	1	69,	0,
#Deleted in new
chrM	1670	3229	chrM:1670-3229	3	+	1670	1670	789624	1	1559,	0,
#Deleted in new
chrM	3229	3304	chrM:3229-3304	3	+	3229	3229	8553170	1	75,	0,
#Deleted in new
chrM	3306	4262	chrM:3306-4262	3	+	3306	4262	0	1	956,	0,
#Deleted in new
chrM	4262	4331	chrM:4262-4331	3	+	4262	4262	8553170	1	69,	0,
#Deleted in new
chrM	4328	4400	chrM:4328-4400	3	-	4328	4328	8553170	1	72,	0,
#Deleted in new
chrM	4401	4469	chrM:4401-4469	3	+	4401	4401	8553170	1	68,	0,
#Deleted in new
chrM	4469	5511	chrM:4469-5511	3	+	4469	5511	0	1	1042,	0,
#Deleted in new
chrM	5511	5579	chrM:5511-5579	3	+	5511	5511	8553170	1	68,	0,
#Deleted in new
chrM	5586	5655	chrM:5586-5655	3	-	5586	5586	8553170	1	69,	0,
#Deleted in new
chrM	5656	5729	chrM:5656-5729	3	-	5656	5656	8553170	1	73,	0,
#Deleted in new
chrM	5760	5826	chrM:5760-5826	3	-	5760	5760	8553170	1	66,	0,
#Deleted in new
chrM	5825	5891	chrM:5825-5891	3	-	5825	5825	8553170	1	66,	0,
#Deleted in new
chrM	5903	7445	chrM:5903-7445	3	+	5903	7445	789624	1	1542,	0,
#Deleted in new
chrM	7445	7514	chrM:7445-7514	3	-	7445	7445	8553170	1	69,	0,
#Deleted in new
chrM	7517	7585	chrM:7517-7585	3	+	7517	7517	8553170	1	68,	0,
#Deleted in new
chrM	7585	8269	chrM:7585-8269	3	+	7585	8269	0	1	684,	0,
#Deleted in new
chrM	8294	8364	chrM:8294-8364	3	+	8294	8294	8553170	1	70,	0,
#Deleted in new
chrM	8365	8572	chrM:8365-8572	3	+	8365	8572	789624	1	207,	0,
#Deleted in new
chrM	8526	9207	chrM:8526-9207	3	+	8526	9207	789624	1	681,	0,
#Deleted in new
chrM	9206	9990	chrM:9206-9990	3	+	9206	9990	789624	1	784,	0,
#Deleted in new
chrM	9990	10058	chrM:9990-10058	3	+	9990	9990	8553170	1	68,	0,
#Deleted in new
chrM	10058	10404	chrM:10058-10404	3	+	10058	10404	0	1	346,	0,
#Deleted in new
chrM	10404	10469	chrM:10404-10469	3	+	10404	10404	8553170	1	65,	0,
#Deleted in new
chrM	10469	10766	chrM:10469-10766	3	+	10469	10766	0	1	297,	0,
#Deleted in new
chrM	10759	12137	chrM:10759-12137	3	+	10759	12137	0	1	1378,	0,
#Deleted in new
chrM	12137	12206	chrM:12137-12206	3	+	12137	12137	8553170	1	69,	0,
#Deleted in new
chrM	12206	12265	chrM:12206-12265	3	+	12206	12206	8553170	1	59,	0,
#Deleted in new
chrM	12265	12336	chrM:12265-12336	3	+	12265	12265	8553170	1	71,	0,
#Deleted in new
chrM	12336	14148	chrM:12336-14148	3	+	12336	14148	0	1	1812,	0,
#Deleted in new
chrM	14148	14673	chrM:14148-14673	3	-	14148	14673	0	1	525,	0,
#Deleted in new
chrM	14673	14742	chrM:14673-14742	3	-	14673	14673	8553170	1	69,	0,
#Deleted in new
chrM	14746	15887	chrM:14746-15887	3	+	14746	15887	0	1	1141,	0,
#Deleted in new
chrM	15887	15953	chrM:15887-15953	3	+	15887	15887	8553170	1	66,	0,
#Deleted in new
chrM	15955	16023	chrM:15955-16023	3	-	15955	15955	8553170	1	68,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrUn_GL000195v1	37433	37534	chrUn_GL000195v1:37433-37534	3	-	37433	37433	8553170	1	101,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrUn_GL000195v1	42938	49164	chrUn_GL000195v1:42938-49164	3	-	44723	49117	789624	2	1985,210,	0,6016,
#Partially deleted in new
chrUn_GL000195v1	173871	179372	chrUn_GL000195v1:173871-179372	3	+	173967	178363	8553170	4	259,20,162,1027,	0,4288,4310,4474,
#Partially deleted in new
chrUn_GL000213v1	108006	139655	chrUn_GL000213v1:108006-139655	3	-	108025	139287	789624	11	241,124,167,45,71,71,138,107,174,115,889,	0,1877,10415,11622,13066,18641,21221,23057,25936,26269,30760,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrUn_GL000213v1	123982	139659	chrUn_GL000213v1:123982-139659	1	-	125192	139287	8553170	8	270,221,71,138,107,174,115,893,	0,1009,2665,5245,7081,9960,10293,14784,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrUn_GL000213v1	127839	127946	chrUn_GL000213v1:127839-127946	3	-	127839	127839	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrUn_GL000216v2	93196	93309	chrUn_GL000216v2:93196-93309	3	-	93196	93196	8553170	1	113,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrUn_GL000218v1	51866	54893	chrUn_GL000218v1:51866-54893	3	-	53482	54214	8553170	1	3027,	0,
#Partially deleted in new
chrUn_GL000219v1	54223	83311	chrUn_GL000219v1:54223-83311	3	-	54223	83311	8553170	4	70,111,92,99,	0,24618,25713,28989,
#Deleted in new
chrUn_GL000220v1	105286	105376	chrUn_GL000220v1:105286-105376	3	+	105286	105286	8553170	1	90,	0,
#Deleted in new
chrUn_GL000220v1	112024	112177	chrUn_GL000220v1:112024-112177	3	+	112024	112024	789624	1	153,	0,
#Deleted in new
chrUn_GL000220v1	149258	149348	chrUn_GL000220v1:149258-149348	3	+	149258	149258	8553170	1	90,	0,
#Deleted in new
chrUn_GL000220v1	155996	156149	chrUn_GL000220v1:155996-156149	3	+	155996	155996	789624	1	153,	0,
#Deleted in new
chrUn_KI270442v1	217249	217401	chrUn_KI270442v1:217249-217401	3	-	217249	217249	8553170	1	152,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrUn_KI270442v1	380607	380726	chrUn_KI270442v1:380607-380726	3	+	380607	380607	8553170	1	119,	0,
#Deleted in new
chrUn_KI270744v1	51008	51114	chrUn_KI270744v1:51008-51114	3	-	51008	51008	8553170	1	106,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrUn_KI270750v1	148667	148843	chrUn_KI270750v1:148667-148843	3	+	148667	148667	8553170	1	176,	0,
#Partially deleted in new
chrX	253742	255091	chrX:253742-255091	7	+	253742	253742	16724991	2	104,155,	0,1194,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	276321	303353	chrX:276321-303353	3	+	284187	299335	789624	8	73,203,148,137,129,156,184,4257,	0,5160,7845,12411,14326,15177,16713,22775,
#Partially deleted in new
chrX	276323	291537	chrX:276323-291537	0	+	276323	276323	8553170	5	71,148,137,145,39,	0,7843,12409,14324,15175,
#Partially deleted in new
chrX	276352	291629	chrX:276352-291629	0	+	284187	291629	789624	5	42,148,137,129,131,	0,7814,12380,14295,15146,
#Partially deleted in new
chrX	281054	288869	chrX:281054-288869	0	+	284187	288869	789624	4	67,203,148,137,	0,427,3112,7678,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	281191	303356	chrX:281191-303356	1	+	284187	299335	789624	7	493,148,137,129,156,184,4260,	0,2975,7541,9456,10307,11843,17905,
#Partially deleted in new
chrX	281193	288787	chrX:281193-288787	0	+	284187	288787	789624	4	63,203,148,55,	0,288,2973,7539,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	281461	303353	chrX:281461-303353	1	+	284187	299335	789624	8	223,148,137,129,156,184,369,517,	0,2705,7271,9186,10037,11573,17635,21375,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	283162	288829	chrX:283162-288829	0	+	284187	288829	789624	3	39,148,97,	0,1004,5570,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	283478	291629	chrX:283478-291629	0	+	284187	291629	789624	5	42,148,137,129,131,	0,688,5254,7169,8020,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	283733	290757	chrX:283733-290757	0	+	284187	290757	789624	3	581,137,110,	0,4999,6914,
#Partially deleted in new
chrX	304528	312463	chrX:304528-312463	0	-	304528	304528	8553170	4	669,153,149,1045,	0,2831,3203,6890,
#Partially deleted in new
chrX	304749	318819	chrX:304749-318819	3	-	305073	318787	789624	10	448,153,149,209,159,68,131,71,138,381,	0,2610,2982,6669,8016,9400,10140,10479,12164,13689,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	320989	321851	chrX:320989-321851	3	+	320989	320989	8553170	2	259,169,	0,693,
#Partially deleted in new
chrX	333962	386710	chrX:333962-386710	3	-	334366	386691	0	13	555,107,119,176,90,49,157,87,75,103,104,186,343,	0,4641,4815,6802,7344,7920,11553,12211,12738,13271,13627,27442,52405,
#Partially deleted in new
chrX	334234	341711	chrX:334234-341711	0	-	334234	334234	8553170	5	283,107,119,176,405,	0,4369,4543,6530,7072,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	334238	347324	chrX:334238-347324	0	-	334238	334238	8553170	8	4472,119,176,625,157,87,75,91,	0,4539,6526,7068,11277,11935,12462,12995,
#Deleted in new
chrX	338612	345629	chrX:338612-345629	0	-	338612	338612	8553170	5	284,176,90,49,114,	0,2152,2694,3270,6903,
#Deleted in new
chrX	340764	345626	chrX:340764-345626	0	-	340764	340764	8553170	4	176,90,355,111,	0,542,1118,4751,
#Deleted in new
chrX	341910	346514	chrX:341910-346514	0	-	341910	341910	8553170	3	21,157,341,	0,3605,4263,
#Partially deleted in new
chrX	344895	386955	chrX:344895-386955	0	-	344895	344895	8553170	8	777,87,75,103,104,186,78,588,	0,1278,1805,2338,2694,16509,17359,41472,
#Partially deleted in new
chrX	346636	361516	chrX:346636-361516	0	-	346636	346636	8553170	4	139,103,104,112,	0,597,953,14768,
#Deleted in new
chrX	346719	347838	chrX:346719-347838	0	-	346719	346719	8553170	3	56,103,249,	0,514,870,
#Partially deleted in new
chrX	347610	374044	chrX:347610-374044	0	-	347610	373771	789624	3	83,186,513,	0,13794,25921,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	386979	405579	chrX:386979-405579	3	+	386979	386979	8553170	2	311,173,	0,18427,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	388099	388389	chrX:388099-388389	3	-	388099	388099	8553170	1	290,	0,
#Partially deleted in new
chrX	419156	421980	chrX:419156-421980	3	+	419156	419156	8553170	2	206,309,	0,2515,
#Deleted in new
chrX	523774	524102	chrX:523774-524102	7	-	523774	523774	16724991	1	328,	0,
#Deleted in new
chrX	545235	545352	chrX:545235-545352	7	-	545235	545235	16724991	1	117,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	624343	659411	chrX:624343-659411	1	+	630897	658829	789624	6	259,709,209,58,89,627,	0,6122,10274,16477,16655,34441,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	624343	646823	chrX:624343-646823	3	+	630897	644636	789624	6	259,709,209,58,89,2433,	0,6122,10274,16477,16655,20047,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	630806	659411	chrX:630806-659411	1	+	630897	658829	789624	5	368,209,58,89,627,	0,3811,10014,10192,27978,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	990220	994365	chrX:990220-994365	3	+	990220	990220	8553170	2	207,381,	0,3764,
#Partially deleted in new
chrX	1008502	1010101	chrX:1008502-1010101	7	-	1008502	1008502	16724991	3	49,289,392,	0,589,1207,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	1187548	1212637	chrX:1187548-1212637	3	-	1190896	1212634	0	9	26,664,85,121,163,134,167,103,82,	0,2948,5669,9231,11013,14853,18884,21257,25007,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	1190489	1212750	chrX:1190489-1212750	1	-	1190896	1212634	0	8	671,85,121,163,134,167,103,195,	0,2728,6290,8072,11912,15943,18316,22066,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	1190491	1212723	chrX:1190491-1212723	0	-	1198926	1212634	789624	8	669,85,121,345,134,167,100,168,	0,2726,6288,8309,11910,15941,18314,22064,
#Partially deleted in new
chrX	1190896	1212634	chrX:1190896-1212634	1	-	1190896	1206445	0	7	264,85,121,163,134,167,79,	0,2321,5883,7665,11505,15536,21659,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrX	1268799	1309922	chrX:1268799-1309922	1	+	1282703	1309479	0	13	80,64,102,143,124,130,173,134,30,136,97,82,521,	0,5955,13878,16978,19719,19959,21537,25528,26627,31691,35123,36646,40602,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chrX	1268799	1309935	chrX:1268799-1309935	1	+	1282703	1309479	0	14	80,88,102,143,124,130,173,134,30,136,102,97,82,534,	0,5955,13878,16978,19719,19959,21537,25528,26627,31691,34461,35123,36646,40602,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	1268799	1309935	chrX:1268799-1309935	1	+	1288814	1309479	0	11	80,102,124,130,173,134,30,136,97,82,534,	0,13878,19719,19959,21537,25528,26627,31691,35123,36646,40602,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrX	1268807	1310381	chrX:1268807-1310381	3	+	1282703	1309479	0	13	72,88,102,143,124,130,173,134,30,136,97,82,980,	0,5947,13870,16970,19711,19951,21529,25520,26619,31683,35115,36638,40594,
#Partially deleted in new
chrX	1268813	1300543	chrX:1268813-1300543	0	+	1268813	1268813	8553170	9	66,88,102,124,130,173,134,30,53,	0,5941,13864,19705,19945,21523,25514,26613,31677,
#Partially deleted in new
chrX	1268817	1294395	chrX:1268817-1294395	0	+	1282703	1294395	789624	7	62,102,143,124,130,173,68,	0,13860,16960,19701,19941,21519,25510,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chrX	1268829	1309924	chrX:1268829-1309924	1	+	1282703	1309479	0	14	50,64,152,102,143,124,130,173,134,30,136,97,82,523,	0,5925,13579,13848,16948,19689,19929,21507,25498,26597,31661,35093,36616,40572,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrX	1268831	1305941	chrX:1268831-1305941	1	+	1282703	1305735	0	13	48,88,102,143,124,130,173,134,30,136,97,82,314,	0,5923,13846,16946,19687,19927,21505,25496,26595,31659,35091,36614,36796,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	1268831	1309922	chrX:1268831-1309922	1	+	1282703	1309868	789624	6	48,88,102,143,25,83,	0,5923,13846,16946,18342,41008,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	1268834	1282220	chrX:1268834-1282220	0	+	1268834	1268834	8553170	3	45,64,350,	0,5920,13036,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	1268844	1309934	chrX:1268844-1309934	1	+	1282703	1309589	0	11	35,88,102,143,124,130,173,134,30,136,533,	0,5910,13833,16933,19674,19914,21492,25483,26582,31646,40557,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	1268844	1309934	chrX:1268844-1309934	1	+	1282703	1305501	0	9	35,88,102,143,124,130,173,82,533,	0,5910,13833,16933,19674,19914,21492,36601,40557,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	1268844	1309934	chrX:1268844-1309934	0	+	1282703	1303970	789624	12	35,88,102,143,124,130,173,134,30,97,82,533,	0,5910,13833,16933,19674,19914,21492,25483,26582,35078,36601,40557,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	1282685	1309638	chrX:1282685-1309638	1	+	1282703	1305501	0	10	94,143,124,130,173,134,30,136,82,237,	0,3092,5833,6073,7651,11642,12741,17805,22760,26716,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	1285651	1288640	chrX:1285651-1288640	0	+	1285651	1285651	8553170	2	269,122,	0,2867,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	1288597	1289105	chrX:1288597-1289105	0	+	1288597	1288597	8553170	2	45,347,	0,161,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	1290452	1309922	chrX:1290452-1309922	0	+	1290452	1290452	8553170	6	57,134,30,136,20,99,	0,3875,4974,10038,12444,19371,
#Deleted in new
chrX	1293917	1293992	chrX:1293917-1293992	3	+	1293917	1293917	5263520	1	75,	0,
#Deleted in new
chrX	1294224	1295578	chrX:1294224-1295578	0	+	1294224	1294224	8553170	2	237,152,	0,1202,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	1294327	1309934	chrX:1294327-1309934	0	+	1294327	1294327	8553170	7	134,30,136,102,97,82,533,	0,1099,6163,8933,9595,11118,15074,
#Deleted in new
chrX	1300255	1300375	chrX:1300255-1300375	7	-	1300255	1300255	16724991	1	120,	0,
#Partially deleted in new
chrX	1336615	1382685	chrX:1336615-1382685	3	+	1341765	1382465	0	12	311,102,119,115,133,185,116,27,115,106,82,295,	0,5112,8700,11815,15484,15706,19605,22245,28522,42043,44407,45775,
#Partially deleted in new
chrX	1336615	1382689	chrX:1336615-1382689	1	+	1341765	1382465	0	10	311,102,133,185,116,27,115,106,82,299,	0,5112,15484,15706,19605,22245,28522,42043,44407,45775,
#Partially deleted in new
chrX	1336795	1356331	chrX:1336795-1356331	0	+	1341765	1356331	789624	5	131,102,133,185,111,	0,4932,15304,15526,19425,
#Partially deleted in new
chrX	1386151	1392724	chrX:1386151-1392724	3	-	1386601	1392009	789624	4	608,141,487,826,	0,1127,3089,5747,
#Partially deleted in new
chrX	1387310	1392103	chrX:1387310-1392103	0	-	1387310	1387310	8553170	4	109,487,99,205,	0,1930,2881,4588,
#Partially deleted in new
chrX	1387344	1392088	chrX:1387344-1392088	0	-	1387344	1387344	8553170	4	75,487,102,190,	0,1896,2847,4554,
#Partially deleted in new
chrX	1396426	1398958	chrX:1396426-1398958	3	+	1396426	1396426	8553170	2	222,134,	0,2398,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	1397024	1399402	chrX:1397024-1399402	1	+	1397024	1397024	789624	3	200,134,36,	0,1800,2342,
#Deleted in new
chrX	1401768	1403493	chrX:1401768-1403493	0	+	1401768	1401768	8553170	2	457,117,	0,1608,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	1401810	1413915	chrX:1401810-1413915	3	+	1401810	1401810	8553170	4	415,125,146,154,	0,1650,10932,11951,
#Partially deleted in new
chrX	1402042	1413131	chrX:1402042-1413131	0	+	1402042	1402042	8553170	3	183,125,389,	0,1418,10700,
#Partially deleted in new
chrX	1403138	1453762	chrX:1403138-1453762	1	-	1403268	1442236	0	13	351,123,144,133,185,163,388,109,62,65,48,132,145,	0,9593,14834,15843,18519,22386,24595,29130,31883,32555,35958,39047,50479,
#Partially deleted in new
chrX	1403140	1452873	chrX:1403140-1452873	3	-	1403268	1452840	0	13	349,123,144,133,185,163,388,109,62,65,48,132,126,	0,9591,14832,15841,18517,22384,24593,29128,31881,32553,35956,39045,49607,
#Partially deleted in new
chrX	1403140	1452929	chrX:1403140-1452929	1	-	1403268	1452840	0	12	349,123,144,133,185,163,388,109,62,65,132,182,	0,9591,14832,15841,18517,22384,24593,29128,31881,32553,39045,49607,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	1403458	1414028	chrX:1403458-1414028	0	+	1403458	1403458	8553170	3	127,146,280,	0,9284,10290,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	1403509	1414024	chrX:1403509-1414024	1	+	1403509	1403509	8553170	3	76,98,261,	0,9281,10254,
#Partially deleted in new
chrX	1427726	1435391	chrX:1427726-1435391	0	-	1427726	1427726	8553170	3	395,109,370,	0,4542,7295,
#Partially deleted in new
chrX	1431901	1435728	chrX:1431901-1435728	0	-	1431901	1431901	8553170	3	476,62,35,	0,3120,3792,
#Partially deleted in new
chrX	1441591	1452872	chrX:1441591-1452872	0	-	1441591	1441591	8553170	2	726,125,	0,11156,
#Duplicated in new
chrX	1462571	1537107	chrX:1462571-1537107	3	-	1465478	1466558	789624	2	4011,187,	0,74349,
#Partially deleted in new
chrX	1466436	1494353	chrX:1466436-1494353	0	-	1466436	1466558	789624	2	146,261,	0,27656,
#Partially deleted in new
chrX	1591592	1602514	chrX:1591592-1602514	3	+	1593462	1601594	789624	5	177,781,149,241,1856,	0,1851,3791,7599,9066,
#Partially deleted in new
chrX	1591622	1602502	chrX:1591622-1602502	0	+	1593462	1600143	789624	6	147,781,149,241,70,1844,	0,1821,3761,7569,8515,9036,
#Partially deleted in new
chrX	1591624	1600303	chrX:1591624-1600303	1	+	1593462	1599621	789624	4	145,781,149,1112,	0,1819,3759,7567,
#Partially deleted in new
chrX	1615163	1643027	chrX:1615163-1643027	1	+	1615199	1643014	0	8	105,175,130,69,119,141,123,225,	0,7975,9105,12539,14657,17986,21274,27639,
#Partially deleted in new
chrX	1615174	1643081	chrX:1615174-1643081	1	+	1615199	1643014	0	7	94,175,130,69,119,123,279,	0,7964,9094,12528,14646,21263,27628,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	1627745	1636463	chrX:1627745-1636463	0	+	1627745	1627745	8553170	2	288,222,	0,8496,
#Deleted in new
chrX	1636397	1643081	chrX:1636397-1643081	0	+	1636397	1643014	789624	2	163,279,	0,6405,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	1732583	1741988	chrX:1732583-1741988	1	+	1732583	1732583	8553170	3	140,247,58,	0,1366,9347,
#Partially deleted in new
chrX	1734116	1763212	chrX:1734116-1763212	3	+	1734116	1734116	8553170	3	80,302,254,	0,21567,28842,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	1767346	1768776	chrX:1767346-1768776	3	+	1767346	1767346	8553170	2	206,342,	0,1088,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	2219515	2500978	chrX:2219515-2500978	3	-	2221040	2500925	789624	7	1714,208,208,102,69,108,162,	0,23507,47224,71986,189229,205681,281301,
#Partially deleted in new
chrX	2243061	2500973	chrX:2243061-2500973	0	-	2243061	2500925	789624	5	169,208,102,108,157,	0,23678,48440,182135,257755,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	2261393	2266937	chrX:2261393-2266937	0	-	2261393	2261393	8553170	2	374,198,	0,5346,
#Partially deleted in new
chrX	2266769	2500650	chrX:2266769-2500650	0	-	2266769	2425212	789624	5	178,102,69,108,340,	0,24732,141975,158427,233541,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	2266853	2502805	chrX:2266853-2502805	0	-	2392466	2502767	789624	6	94,102,121,69,108,45,	0,24648,125500,141891,158343,235907,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	2291501	2500589	chrX:2291501-2500589	0	-	2392466	2500589	789624	5	102,121,69,108,279,	0,100852,117243,133695,208809,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	2334294	2336410	chrX:2334294-2336410	3	-	2334294	2334294	8553170	2	625,26,	0,2090,
#Partially deleted in new
chrX	2337830	2500960	chrX:2337830-2500960	0	-	2337830	2337830	8553170	4	169,69,108,144,	0,70914,87366,162986,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	2486413	2500967	chrX:2486413-2500967	1	-	2488634	2490719	0	2	4356,151,	0,14403,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	2486413	2500967	chrX:2486413-2500967	3	-	2488634	2490719	0	2	4359,151,	0,14403,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	2486981	2488971	chrX:2486981-2488971	0	-	2486981	2486981	8553170	2	721,184,	0,1806,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	2488185	2500555	chrX:2488185-2500555	1	-	2488634	2490719	0	2	2587,245,	0,12125,
#Partially deleted in new
chrX	2489904	2500895	chrX:2489904-2500895	0	-	2489904	2490719	789624	2	868,79,	0,10912,
#Deleted in new
chrX	2609190	2609254	chrX:2609190-2609254	3	+	2609190	2609190	5263520	1	64,	0,
#Partially deleted in new
chrX	2609347	2616171	chrX:2609347-2616171	5	+	2609347	2609347	16724991	4	134,43,69,356,	0,1648,2802,6468,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	2609391	2657229	chrX:2609391-2657229	7	+	2609391	2609391	16724991	9	90,43,69,154,45,69,69,46,2203,	0,1604,2758,6424,9348,10037,13993,17205,45635,
#Partially deleted in new
chrX	2609393	2638329	chrX:2609393-2638329	4	+	2609393	2609393	16724991	10	88,43,69,154,45,69,45,69,46,356,	0,1602,2756,6422,9346,10035,13296,13991,17203,28580,
#Partially deleted in new
chrX	2609414	2623453	chrX:2609414-2623453	5	+	2609414	2609414	16724991	8	67,43,69,154,45,69,45,69,	0,1581,2735,6401,9325,10014,13275,13970,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	2612987	2615347	chrX:2612987-2615347	3	-	2612987	2612987	789624	2	709,631,	0,1729,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	2616618	2638694	chrX:2616618-2638694	4	+	2616618	2616618	16724991	5	2166,69,69,46,721,	0,2810,6766,9978,21355,
#Partially deleted in new
chrX	2691132	2741309	chrX:2691132-2741309	3	+	2691360	2740804	789624	10	295,33,48,45,69,48,51,114,57,531,	0,23289,26472,28528,29223,31494,32181,35127,47067,49646,
#Partially deleted in new
chrX	2691186	2741300	chrX:2691186-2741300	1	+	2691360	2733364	789624	11	241,33,48,45,69,48,51,114,18,54,522,	0,23235,26418,28474,29169,31440,32127,35073,42170,47016,49592,
#Partially deleted in new
chrX	2691275	2741101	chrX:2691275-2741101	1	+	2691360	2740804	789624	9	152,33,45,69,48,51,114,57,323,	0,23146,28385,29080,31351,32038,34984,46924,49503,
#Partially deleted in new
chrX	2691279	2733667	chrX:2691279-2733667	1	+	2691360	2733364	789624	10	148,33,48,45,69,48,51,114,51,311,	0,23142,26325,28381,29076,31347,32034,34980,36013,42077,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	2691291	2718018	chrX:2691291-2718018	0	+	2691291	2691291	8553170	3	136,33,414,	0,23130,26313,
#Partially deleted in new
chrX	2691294	2723434	chrX:2691294-2723434	0	+	2691294	2691294	8553170	7	133,33,48,45,69,48,121,	0,23127,26310,28366,29061,31332,32019,
#Partially deleted in new
chrX	2691309	2733672	chrX:2691309-2733672	1	+	2691360	2733364	789624	9	118,33,48,45,69,48,51,114,316,	0,23112,26295,28351,29046,31317,32004,34950,42047,
#Partially deleted in new
chrX	2691312	2741290	chrX:2691312-2741290	1	+	2691360	2740804	789624	10	115,33,48,45,69,48,51,114,54,512,	0,23109,26292,28348,29043,31314,32001,34947,46890,49466,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	2691325	2715597	chrX:2691325-2715597	0	+	2691325	2691325	8553170	2	102,1176,	0,23096,
#Deleted in new
chrX	2691360	2692253	chrX:2691360-2692253	1	+	2691360	2691951	789624	2	67,466,	0,427,
#Partially deleted in new
chrX	2691360	2740804	chrX:2691360-2740804	0	+	2691360	2733364	789624	11	67,33,48,45,69,48,51,114,18,54,26,	0,23061,26244,28300,28995,31266,31953,34899,41996,46842,49418,
#Partially deleted in new
chrX	2691499	2726373	chrX:2691499-2726373	0	+	2691499	2691499	8553170	8	196,33,48,45,69,48,51,114,	0,22922,26105,28161,28856,31127,31814,34760,
#Partially deleted in new
chrX	2717373	2726363	chrX:2717373-2726363	0	+	2717373	2717373	8553170	7	101,48,45,69,48,51,104,	0,231,2287,2982,5253,5940,8886,
#Partially deleted in new
chrX	2719067	2726268	chrX:2719067-2726268	0	+	2719067	2719067	8553170	5	638,69,48,51,9,	0,1288,3559,4246,7192,
#Partially deleted in new
chrX	2726340	2741125	chrX:2726340-2741125	0	+	2726340	2737915	789624	3	33,376,347,	0,11540,14438,
#Partially deleted in new
chrX	2752047	2814447	chrX:2752047-2814447	1	+	2752274	2814380	789624	9	288,63,63,69,51,45,36,117,84,	0,30018,37596,42487,45262,54653,56137,59288,62316,
#Partially deleted in new
chrX	2752047	2814447	chrX:2752047-2814447	1	+	2752274	2814380	789624	8	288,63,63,69,51,36,117,84,	0,30018,37596,42487,45262,56137,59288,62316,
#Partially deleted in new
chrX	2752051	2815927	chrX:2752051-2815927	3	+	2752274	2814380	789624	10	284,42,24,63,63,69,51,36,117,1564,	0,18498,22664,30014,37592,42483,45258,56133,59284,62312,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	2752051	2816500	chrX:2752051-2816500	1	+	2752274	2814380	789624	11	284,42,24,63,63,69,51,45,36,117,2137,	0,18498,22664,30014,37592,42483,45258,54649,56133,59284,62312,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	2752295	2774996	chrX:2752295-2774996	0	+	2752295	2752295	5263520	3	40,42,281,	0,18254,22420,
#Partially deleted in new
chrX	2794534	2808377	chrX:2794534-2808377	0	+	2794534	2794534	8553170	3	69,51,193,	0,2775,13650,
#Partially deleted in new
chrX	2828787	2881440	chrX:2828787-2881440	1	+	2830188	2881213	0	11	188,135,142,175,163,127,223,201,105,108,389,	0,1273,14425,25192,26205,27710,31055,32734,47022,48412,52264,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	2828821	2882818	chrX:2828821-2882818	3	+	2830188	2881213	0	12	154,135,93,142,175,163,127,223,201,105,108,1767,	0,1239,14176,14391,25158,26171,27676,31021,32700,46988,48378,52230,
#Partially deleted in new
chrX	2828913	2882817	chrX:2828913-2882817	0	+	2828913	2828913	8553170	8	62,135,175,163,127,223,201,1766,	0,1147,25066,26079,27584,30929,32608,52138,
#Partially deleted in new
chrX	2829271	2855081	chrX:2829271-2855081	0	+	2830188	2855081	789624	5	83,135,142,175,89,	0,789,13941,24708,25721,
#Partially deleted in new
chrX	2830060	2856623	chrX:2830060-2856623	0	+	2830060	2830060	8553170	4	135,142,163,126,	0,13152,24932,26437,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	2830188	2881213	chrX:2830188-2881213	1	+	2830188	2881213	0	9	7,93,142,175,163,127,223,201,162,	0,12809,13024,23791,24804,26309,29654,31333,50863,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	2842990	2882820	chrX:2842990-2882820	1	+	2842990	2881213	789624	8	100,142,175,163,127,223,201,1769,	0,222,10989,12002,13507,16852,18531,38061,
#Partially deleted in new
chrX	2852739	2853760	chrX:2852739-2853760	3	-	2852739	2852739	8553170	2	270,245,	0,776,
#Partially deleted in new
chrX	2854059	2877443	chrX:2854059-2877443	0	+	2854059	2854059	8553170	7	95,163,127,223,201,105,244,	0,933,2438,5783,7462,21750,23140,
#Partially deleted in new
chrX	2855120	2881091	chrX:2855120-2881091	0	+	2855120	2881091	789624	6	35,127,223,201,105,40,	0,1377,4722,6401,20689,25931,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	2903969	2929351	chrX:2903969-2929351	3	-	2907270	2929275	789624	10	3663,122,163,135,137,424,123,122,150,120,	0,4751,5847,6689,11586,13834,16631,17933,21646,25262,
#Deleted in new
chrX	2904903	2906081	chrX:2904903-2906081	3	+	2904903	2904903	789624	2	302,514,	0,664,
#Partially deleted in new
chrX	2904917	2909920	chrX:2904917-2909920	0	-	2905017	2909920	789624	4	145,209,122,104,	0,2506,3803,4899,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	2906155	2929349	chrX:2906155-2929349	0	-	2906155	2906155	8553170	3	1829,85,118,	0,2565,23076,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	2913613	2929275	chrX:2913613-2929275	0	-	2913613	2913613	8553170	7	1160,137,424,123,122,150,44,	0,1942,4190,6987,8289,12002,15618,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	2914496	2917878	chrX:2914496-2917878	0	-	2914496	2914496	8553170	2	277,75,	0,3307,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	2920380	2929279	chrX:2920380-2929279	0	-	2920380	2920380	8553170	4	343,122,150,48,	0,1522,5235,8851,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	2920675	2929339	chrX:2920675-2929339	0	-	2923251	2929275	789624	5	48,122,139,150,108,	0,1227,2492,4940,8556,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	2934631	2968310	chrX:2934631-2968310	1	-	2934831	2968155	789624	10	559,122,163,135,137,424,123,122,43,162,	0,2110,3463,8433,11366,14672,18511,20784,25746,33517,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	2934631	2964453	chrX:2934631-2964453	1	-	2934831	2959700	789624	12	559,122,163,135,137,424,123,122,162,286,43,230,	0,2110,3463,8433,11366,14672,18511,20784,23642,24971,25746,29592,
#Partially deleted in new
chrX	2934815	2964270	chrX:2934815-2964270	3	-	2934831	2960400	789624	11	375,122,163,135,137,424,123,122,162,43,47,	0,1926,3279,8249,11182,14488,18327,20600,23458,25562,29408,
#Partially deleted in new
chrX	2949622	2964264	chrX:2949622-2964264	0	-	2949622	2960400	789624	6	105,123,122,162,91,41,	0,3520,5793,8651,10755,14601,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	2952830	2953228	chrX:2952830-2953228	0	-	2952830	2952830	8553170	2	162,86,	0,312,
#Partially deleted in new
chrX	2958410	2964264	chrX:2958410-2964264	0	-	2958410	2958410	8553170	4	25,286,43,41,	0,1192,1967,5813,
#Partially deleted in new
chrX	3006612	3033571	chrX:3006612-3033571	3	+	3006612	3033385	789624	9	92,122,126,424,137,135,163,122,554,	0,3417,6434,8357,11921,17408,20700,22634,26405,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	3041470	3112726	chrX:3041470-3112726	3	+	3068100	3112556	789624	11	193,39,150,122,123,424,137,135,163,125,553,	0,26602,30555,35077,39420,42772,48025,59616,62291,68657,70703,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	3058219	3058502	chrX:3058219-3058502	3	-	3058219	3058219	8553170	1	283,	0,
#Partially deleted in new
chrX	3066832	3112706	chrX:3066832-3112706	1	+	3068100	3112556	789624	11	40,39,150,122,123,424,137,135,163,125,533,	0,1240,5193,9715,14058,17410,22663,34254,36929,43295,45341,
#Partially deleted in new
chrX	3112899	3113596	chrX:3112899-3113596	7	-	3112899	3112899	16724991	2	232,154,	0,543,
#Partially deleted in new
chrX	3271819	3284653	chrX:3271819-3284653	3	+	3271819	3271819	789624	3	99,76,499,	0,477,12335,
#Partially deleted in new
chrX	3308564	3346641	chrX:3308564-3346641	3	-	3309715	3343833	789624	7	3060,901,4968,391,130,216,127,	0,8538,11443,21453,22079,35081,37950,
#Partially deleted in new
chrX	3367148	3368382	chrX:3367148-3368382	7	+	3367148	3367148	16724991	1	1234,	0,
#Deleted in new
chrX	3532116	3532251	chrX:3532116-3532251	3	-	3532116	3532116	5263520	1	135,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	3572856	3572961	chrX:3572856-3572961	3	+	3572856	3572856	8553170	1	105,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	3604369	3713608	chrX:3604369-3713608	3	-	3612199	3713253	789624	9	4576,149,78,58,96,120,264,169,521,	0,7807,11445,16889,22049,37482,50779,70228,108718,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	3607257	3607365	chrX:3607257-3607365	3	-	3607257	3607257	8553170	1	108,	0,
#Partially deleted in new
chrX	3608624	3612281	chrX:3608624-3612281	0	-	3608624	3608624	8553170	3	321,113,105,	0,2597,3552,
#Deleted in new
chrX	3610950	3612255	chrX:3610950-3612255	0	-	3610950	3610950	8553170	2	384,79,	0,1226,
#Partially deleted in new
chrX	3612309	3670215	chrX:3612309-3670215	0	-	3612309	3612309	8553170	7	16,78,58,96,120,264,37,	0,3505,8949,14109,29542,42839,57869,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	3641442	3641555	chrX:3641442-3641555	3	-	3641442	3641442	8553170	1	113,	0,
#Partially deleted in new
chrX	3659486	3668192	chrX:3659486-3668192	3	+	3659486	3659486	789624	3	52,205,259,	0,7795,8447,
#Deleted in new
chrX	3717148	3717600	chrX:3717148-3717600	7	+	3717148	3717148	16724991	1	452,	0,
#Partially deleted in new
chrX	3817527	3843857	chrX:3817527-3843857	0	-	3817527	3817527	8553170	4	251,59,29,517,	0,914,11836,25813,
#Partially deleted in new
chrX	3817527	3822571	chrX:3817527-3822571	0	-	3817527	3817527	8553170	3	251,59,198,	0,914,4846,
#Partially deleted in new
chrX	3817527	3825203	chrX:3817527-3825203	0	-	3817527	3817527	8553170	3	251,59,116,	0,914,7560,
#Partially deleted in new
chrX	3817527	3828950	chrX:3817527-3828950	0	-	3817527	3817527	8553170	2	251,445,	0,10978,
#Partially deleted in new
chrX	3817527	3828859	chrX:3817527-3828859	0	-	3817527	3817527	8553170	4	251,59,47,354,	0,914,1129,10978,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrX	3817527	3903471	chrX:3817527-3903471	3	-	3817527	3817527	8553170	13	251,59,213,207,144,129,887,236,885,236,207,144,31,	0,914,4545,4846,7560,9073,10978,37164,49394,75588,81688,84400,85913,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	3817534	3824598	chrX:3817534-3824598	1	-	3817534	3817534	8553170	5	244,59,47,207,365,	0,907,1122,4839,6699,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	3821680	3828597	chrX:3821680-3828597	0	-	3821680	3821680	8553170	3	605,207,92,	0,693,6825,
#Partially deleted in new
chrX	3828892	3843566	chrX:3828892-3843566	0	-	3828892	3828892	8553170	2	500,226,	0,14448,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	3848205	3903471	chrX:3848205-3903471	1	-	3848205	3848205	8553170	11	285,129,236,207,238,100,857,236,207,144,31,	0,2007,6486,12584,14444,16837,18744,44910,51010,53722,55235,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	3853009	3863574	chrX:3853009-3863574	1	-	3853009	3853009	8553170	3	1918,207,73,	0,7780,10492,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	3854348	3867135	chrX:3854348-3867135	0	-	3854348	3854348	8553170	2	579,214,	0,12573,
#Partially deleted in new
chrX	3860798	3931573	chrX:3860798-3931573	1	-	3860798	3860798	8553170	6	198,144,236,207,144,27,	0,2703,32317,38417,41129,70748,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	3864397	3882317	chrX:3864397-3882317	1	-	3864397	3864397	8553170	3	745,857,553,	0,2552,17367,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	3891437	3902000	chrX:3891437-3902000	1	-	3891437	3891437	8553170	3	1914,207,73,	0,7778,10490,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	3893291	3905709	chrX:3893291-3905709	0	-	3893291	3893291	8553170	2	60,430,	0,11988,
#Partially deleted in new
chrX	3905686	3920746	chrX:3905686-3920746	0	-	3905686	3905686	8553170	2	546,553,	0,14507,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	3929868	3937855	chrX:3929868-3937855	1	-	3929868	3929868	8553170	2	1914,204,	0,7783,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	3953055	3953561	chrX:3953055-3953561	7	+	3953055	3953055	16724991	2	400,74,	0,432,
#Partially deleted in new
chrX	5168917	5169439	chrX:5168917-5169439	7	-	5168917	5168917	16724991	1	522,	0,
#Partially deleted in new
chrX	5169511	5170645	chrX:5169511-5170645	7	+	5169511	5169511	16724991	1	1134,	0,
#Deleted in new
chrX	5305713	5307128	chrX:5305713-5307128	7	-	5305713	5305713	16724991	1	1415,	0,
#Deleted in new
chrX	5410121	5410251	chrX:5410121-5410251	3	+	5410121	5410121	8553170	1	130,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	5653420	5726305	chrX:5653420-5726305	3	-	5653420	5653420	8553170	3	283,201,376,	0,15985,72509,
#Partially deleted in new
chrX	5840636	5903353	chrX:5840636-5903353	0	-	5840636	5840636	8553170	3	255,68,277,	0,3797,62440,
#Partially deleted in new
chrX	5890025	6228863	chrX:5890025-6228863	3	-	5892816	6151466	0	6	3641,790,186,153,777,323,	0,13051,19028,139254,260969,338515,
#Partially deleted in new
chrX	5890031	6227203	chrX:5890031-6227203	1	-	5892816	6151466	0	6	3635,790,186,153,777,324,	0,13045,19022,139248,260963,336848,
#Partially deleted in new
chrX	5890277	6227847	chrX:5890277-6227847	1	-	5892816	6151466	0	6	3389,790,186,153,777,159,	0,12799,18776,139002,260717,337411,
#Partially deleted in new
chrX	5892203	6151466	chrX:5892203-6151466	1	-	5892816	6151466	0	6	1463,790,186,153,60,472,	0,10873,16850,137076,140487,258791,
#Partially deleted in new
chrX	5892204	6228615	chrX:5892204-6228615	1	-	5892816	6151466	0	7	1462,790,186,153,777,307,75,	0,10872,16849,137075,258790,295278,336336,
#Deleted in new
chrX	6061643	6061749	chrX:6061643-6061749	3	-	6061643	6061643	8553170	1	106,	0,
#Partially deleted in new
chrX	6151008	6226765	chrX:6151008-6226765	0	-	6151008	6151466	789624	2	763,131,	0,75626,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	6151289	6187038	chrX:6151289-6187038	0	-	6151289	6151466	789624	2	482,267,	0,35482,
#Deleted in new
chrX	6383905	6383963	chrX:6383905-6383963	3	-	6383905	6383905	5263520	1	58,	0,
#Deleted in new
chrX	6422091	6422701	chrX:6422091-6422701	7	-	6422091	6422091	16724991	1	610,	0,
#Deleted in new
chrX	6533617	6535118	chrX:6533617-6535118	3	-	6533744	6534497	789624	3	586,248,161,	0,778,1340,
#Deleted in new
chrX	6533617	6535118	chrX:6533617-6535118	1	-	6533705	6534497	789624	5	127,4,272,248,161,	0,130,314,778,1340,
#Deleted in new
chrX	6533744	6535118	chrX:6533744-6535118	1	-	6533744	6534497	789624	4	144,255,248,161,	0,204,651,1213,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	6667864	6721544	chrX:6667864-6721544	3	-	6667864	6667864	8553170	3	265,124,128,	0,38478,53552,
#Deleted in new
chrX	6989328	6989783	chrX:6989328-6989783	7	+	6989328	6989328	16724991	1	455,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	7048919	7148190	chrX:7048919-7148190	1	-	7050295	7148113	0	4	1553,230,219,138,	0,28300,56700,99133,
#Partially deleted in new
chrX	7049517	7148153	chrX:7049517-7148153	1	-	7050295	7148113	0	4	955,230,90,101,	0,27702,56231,98535,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	7049762	7148158	chrX:7049762-7148158	3	-	7050295	7148113	0	5	710,230,219,69,106,	0,27457,55857,67203,98290,
#Partially deleted in new
chrX	7057585	7148190	chrX:7057585-7148190	1	-	7057706	7148113	0	4	238,230,219,138,	0,19634,48034,90467,
#Partially deleted in new
chrX	7057759	7148125	chrX:7057759-7148125	0	-	7057759	7148113	789624	4	64,230,219,73,	0,19460,47860,90293,
#Partially deleted in new
chrX	7084750	7148152	chrX:7084750-7148152	0	-	7084750	7084750	8553170	3	721,219,100,	0,20869,63302,
#Deleted in new
chrX	7113004	7113404	chrX:7113004-7113404	7	-	7113004	7113004	16724991	1	400,	0,
#Deleted in new
chrX	7147859	7147937	chrX:7147859-7147937	3	+	7147859	7147859	5263520	1	78,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	7219455	7354810	chrX:7219455-7354810	3	+	7219675	7350261	0	10	231,141,122,123,424,137,138,160,122,4923,	0,33740,37786,38010,39893,56495,85590,105883,114530,130432,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	7489658	7491199	chrX:7489658-7491199	3	+	7489658	7489658	8553170	1	1541,	0,
#Partially deleted in new
chrX	7842261	7844143	chrX:7842261-7844143	3	+	7843203	7844016	789624	3	73,248,646,	0,796,1236,
#Partially deleted in new
chrX	7842261	7844143	chrX:7842261-7844143	1	+	7843203	7844055	789624	6	110,51,248,272,4,127,	0,429,796,1236,1748,1755,
#Partially deleted in new
chrX	7843087	7844016	chrX:7843087-7844016	1	+	7843203	7844016	789624	3	218,255,204,	0,410,725,
#Deleted in new
chrX	7896513	7896722	chrX:7896513-7896722	7	-	7896513	7896513	16724991	1	209,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	7898246	7927443	chrX:7898246-7927443	3	-	7900685	7926119	789624	7	2571,153,66,136,95,193,158,	0,3742,13781,23466,23757,27693,29039,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	7898762	7927739	chrX:7898762-7927739	1	-	7900685	7926119	789624	7	2055,153,66,136,95,193,54,	0,3226,13265,22950,23241,27177,28923,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	7898762	7927739	chrX:7898762-7927739	1	-	7900685	7922017	789624	6	2055,153,66,136,95,54,	0,3226,13265,22950,23241,28923,
#Partially deleted in new
chrX	7902048	7927739	chrX:7902048-7927739	0	-	7902048	7926119	789624	6	93,66,136,95,193,69,	0,9979,19664,19955,23891,25622,
#Partially deleted in new
chrX	8007377	8018160	chrX:8007377-8018160	3	+	8007377	8007377	8553170	2	72,105,	0,10678,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	8045185	8231386	chrX:8045185-8231386	3	+	8045185	8045185	8553170	5	85,58,119,71,960,	0,17425,52871,183149,185241,
#Deleted in new
chrX	8126964	8127061	chrX:8126964-8127061	3	+	8126964	8126964	5263520	1	97,	0,
#Deleted in new
chrX	8169943	8171267	chrX:8169943-8171267	3	-	8170031	8170643	789624	3	406,248,161,	0,598,1163,
#Deleted in new
chrX	8464829	8466506	chrX:8464829-8466506	3	+	8465450	8466383	789624	3	161,248,762,	0,475,915,
#Deleted in new
chrX	8464829	8466510	chrX:8464829-8466510	1	+	8465450	8466422	789624	5	161,248,272,4,127,	0,475,915,1547,1554,
#Deleted in new
chrX	8464829	8466383	chrX:8464829-8466383	1	+	8465450	8466383	789624	4	161,248,426,33,	0,475,915,1521,
#Deleted in new
chrX	8465425	8466469	chrX:8465425-8466469	1	+	8465450	8466383	789624	4	127,189,111,329,	0,319,574,715,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chrX	8528873	8732186	chrX:8528873-8732186	3	-	8532994	8732036	0	14	4180,142,221,172,95,147,145,206,130,185,223,63,48,357,	0,5445,6717,7897,10790,25078,39358,41625,56393,58920,68160,94734,170824,202956,
#Deleted in new
chrX	8535180	8536936	chrX:8535180-8536936	0	-	8535180	8535180	8553170	2	631,166,	0,1590,
#Partially deleted in new
chrX	8565805	8570650	chrX:8565805-8570650	0	-	8565805	8565805	8553170	3	407,145,152,	0,2426,4693,
#Deleted in new
chrX	8783513	8784461	chrX:8783513-8784461	7	-	8783513	8783513	16724991	1	948,	0,
#Partially deleted in new
chrX	8790794	8801383	chrX:8790794-8801383	3	-	8791310	8800171	789624	10	378,100,99,343,115,32,121,129,129,73,	0,485,2863,4283,5473,7355,7564,8171,9286,10516,
#Partially deleted in new
chrX	8790794	8801337	chrX:8790794-8801337	1	-	8791310	8800171	789624	10	378,100,99,343,115,32,121,129,129,98,	0,485,2863,4283,5473,7355,7564,8171,9286,10445,
#Deleted in new
chrX	8856664	8857059	chrX:8856664-8857059	7	-	8856664	8856664	16724991	1	395,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	8863860	8867601	chrX:8863860-8867601	3	-	8863860	8863860	8553170	3	232,143,91,	0,2811,3650,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	8897641	8927153	chrX:8897641-8927153	3	-	8897641	8897641	8553170	4	283,253,118,255,	0,27669,28031,29257,
#Deleted in new
chrX	8980424	8982505	chrX:8980424-8982505	7	-	8980424	8980424	16724991	1	2081,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	9024231	9033310	chrX:9024231-9033310	1	-	9025514	9033121	789624	8	1146,100,99,112,85,32,121,352,	0,1252,3636,5075,5890,7898,8109,8727,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	9024994	9034127	chrX:9024994-9034127	3	-	9025514	9032986	789624	9	383,100,99,112,100,32,121,117,276,	0,489,2873,4312,5266,7135,7346,7964,8857,
#Partially deleted in new
chrX	9024994	9033075	chrX:9024994-9033075	1	-	9025514	9032986	789624	8	383,100,99,112,100,32,121,117,	0,489,2873,4312,5266,7135,7346,7964,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	9025104	9164639	chrX:9025104-9164639	0	-	9025104	9025104	8553170	9	273,100,99,112,1901,735,157,108,107,	0,379,2763,4202,5156,7236,57474,137692,139428,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	9025104	9164606	chrX:9025104-9164606	0	-	9032392	9082665	789624	11	273,100,99,112,100,32,121,117,157,108,314,	0,379,2763,4202,5156,7025,7236,7854,57474,137692,139188,
#Deleted in new
chrX	9133827	9133946	chrX:9133827-9133946	7	+	9133827	9133827	16724991	1	119,	0,
#Deleted in new
chrX	9160613	9163201	chrX:9160613-9163201	0	-	9160613	9160613	8553170	4	1301,116,108,125,	0,1584,2183,2463,
#Deleted in new
chrX	9179384	9179606	chrX:9179384-9179606	7	+	9179384	9179384	16724991	1	222,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	9249919	9275206	chrX:9249919-9275206	3	+	9249919	9249919	8553170	2	64,1651,	0,23636,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	9402750	9404802	chrX:9402750-9404802	7	+	9402750	9402750	16724991	2	1085,515,	0,1537,
#Deleted in new
chrX	9404953	9405731	chrX:9404953-9405731	7	+	9404953	9404953	16724991	1	778,	0,
#Deleted in new
chrX	9406024	9406778	chrX:9406024-9406778	7	+	9406024	9406024	16724991	1	754,	0,
#Deleted in new
chrX	9406951	9407708	chrX:9406951-9407708	7	+	9406951	9406951	16724991	1	757,	0,
#Deleted in new
chrX	9407860	9408638	chrX:9407860-9408638	7	+	9407860	9407860	16724991	1	778,	0,
#Deleted in new
chrX	9408817	9409571	chrX:9408817-9409571	7	+	9408817	9408817	16724991	1	754,	0,
#Deleted in new
chrX	9409747	9410501	chrX:9409747-9410501	7	+	9409747	9409747	16724991	1	754,	0,
#Deleted in new
chrX	9410788	9411545	chrX:9410788-9411545	7	+	9410788	9410788	16724991	1	757,	0,
#Deleted in new
chrX	9411700	9412478	chrX:9411700-9412478	7	+	9411700	9411700	16724991	1	778,	0,
#Deleted in new
chrX	9412771	9413522	chrX:9412771-9413522	7	+	9412771	9412771	16724991	1	751,	0,
#Deleted in new
chrX	9413815	9414569	chrX:9413815-9414569	7	+	9413815	9413815	16724991	1	754,	0,
#Partially deleted in new
chrX	9463294	9719740	chrX:9463294-9719740	1	+	9653586	9716246	0	18	168,70,88,145,108,146,259,133,142,64,98,61,122,75,128,166,102,3521,	0,38485,176978,190250,190920,220748,224722,228284,228818,229854,230027,234074,241698,245953,246338,248316,251607,252925,
#Partially deleted in new
chrX	9463294	9719740	chrX:9463294-9719740	3	+	9654264	9716246	0	17	168,70,88,108,146,259,133,142,64,98,61,122,75,128,166,102,3521,	0,38485,176978,190920,220748,224722,228284,228818,229854,230027,234074,241698,245953,246338,248316,251607,252925,
#Partially deleted in new
chrX	9463319	9654288	chrX:9463319-9654288	0	+	9653586	9654288	789624	5	143,70,88,145,74,	0,38460,176953,190225,190895,
#Partially deleted in new
chrX	9463328	9718862	chrX:9463328-9718862	1	+	9654264	9716246	0	18	134,70,135,88,108,146,259,133,142,64,98,61,122,75,128,166,102,2643,	0,38451,71571,176944,190886,220714,224688,228250,228784,229820,229993,234040,241664,245919,246304,248282,251573,252891,
#Partially deleted in new
chrX	9463330	9688037	chrX:9463330-9688037	0	+	9654264	9688037	789624	6	132,70,88,108,146,21,	0,38449,176942,190884,220712,224686,
#Partially deleted in new
chrX	9465007	9719743	chrX:9465007-9719743	1	+	9653586	9716246	0	18	440,70,88,145,108,146,259,133,142,64,98,61,122,75,128,166,102,3524,	0,36772,175265,188537,189207,219035,223009,226571,227105,228141,228314,232361,239985,244240,244625,246603,249894,251212,
#Partially deleted in new
chrX	9465068	9719738	chrX:9465068-9719738	1	+	9653586	9716246	0	18	379,70,88,145,108,146,259,133,142,64,98,61,122,75,128,166,102,3519,	0,36711,175204,188476,189146,218974,222948,226510,227044,228080,228253,232300,239924,244179,244564,246542,249833,251151,
#Partially deleted in new
chrX	9465293	9684118	chrX:9465293-9684118	0	+	9654264	9684118	789624	5	154,70,88,108,76,	0,36486,174979,188921,218749,
#Partially deleted in new
chrX	9530982	9719397	chrX:9530982-9719397	1	+	9653586	9716246	0	17	106,88,145,108,146,259,133,142,64,98,61,122,75,128,166,102,3178,	0,109290,122562,123232,153060,157034,160596,161130,162166,162339,166386,174010,178265,178650,180628,183919,185237,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chrX	9531005	9719723	chrX:9531005-9719723	1	+	9653586	9716246	0	18	83,1637,88,145,108,146,259,133,142,64,98,61,122,75,128,166,102,3504,	0,105276,109267,122539,123209,153037,157011,160573,161107,162143,162316,166363,173987,178242,178627,180605,183896,185214,
#Partially deleted in new
chrX	9531038	9688149	chrX:9531038-9688149	0	+	9654264	9688149	789624	5	50,88,108,146,133,	0,109234,123176,153004,156978,
#Partially deleted in new
chrX	9534942	9684070	chrX:9534942-9684070	0	+	9653586	9684070	789624	5	18,88,145,108,28,	0,105330,118602,119272,149100,
#Partially deleted in new
chrX	9560464	9741037	chrX:9560464-9741037	1	+	9654264	9740808	789624	16	84,88,108,146,259,133,142,64,98,61,122,75,128,166,102,256,	0,79808,93750,123578,127552,131114,131648,132684,132857,136904,144528,148783,149168,151146,154437,180317,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	9639819	9645395	chrX:9639819-9645395	0	+	9639819	9639819	8553170	3	116,88,719,	0,453,4857,
#Partially deleted in new
chrX	9725345	9765964	chrX:9725345-9765964	3	-	9725745	9765817	789624	9	495,235,118,109,110,93,95,110,397,	0,14139,15992,18219,20698,23228,33986,35371,40222,
#Partially deleted in new
chrX	9738228	9739719	chrX:9738228-9739719	0	-	9738228	9738228	8553170	2	357,235,	0,1256,
#Partially deleted in new
chrX	9739551	9786297	chrX:9739551-9786297	0	-	9739551	9760824	789624	8	168,118,109,110,93,95,110,56,	0,1786,4013,6492,9022,19780,21165,46690,
#Partially deleted in new
chrX	9743564	9766189	chrX:9743564-9766189	0	-	9743564	9760824	789624	6	109,110,93,95,110,70,	0,2479,5009,15767,17152,22555,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	9747832	9759394	chrX:9747832-9759394	0	-	9747832	9747832	8553170	3	241,93,63,	0,741,11499,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	9786455	9949443	chrX:9786455-9949443	3	+	9786545	9946937	0	10	255,152,132,2341,101,696,552,172,273,2773,	0,87196,104521,107902,111734,145719,150678,152739,158185,160215,
#Deleted in new
chrX	9818238	9819469	chrX:9818238-9819469	7	-	9818238	9818238	16724991	1	1231,	0,
#Deleted in new
chrX	9865092	9865543	chrX:9865092-9865543	7	-	9865092	9865092	16724991	1	451,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	9874600	9874701	chrX:9874600-9874701	3	-	9874600	9874600	8553170	1	101,	0,
#Partially deleted in new
chrX	9898144	9937146	chrX:9898144-9937146	0	+	9898144	9898144	8553170	3	146,696,13,	0,34030,38989,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	9912433	9949441	chrX:9912433-9949441	1	+	9932778	9946937	789624	6	154,696,552,172,270,2771,	0,19741,24700,26761,32210,34237,
#Partially deleted in new
chrX	9912682	9946708	chrX:9912682-9946708	0	+	9932778	9946708	789624	6	545,696,552,172,273,38,	0,19492,24451,26512,31958,33988,
#Deleted in new
chrX	9967357	9968352	chrX:9967357-9968352	3	+	9967357	9968002	789624	1	995,	0,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chrX	10015561	10144478	chrX:10015561-10144478	3	+	10063538	10141501	789624	23	297,110,204,77,80,130,150,74,243,90,566,121,75,87,193,174,152,166,165,93,228,128,3044,	0,47883,51725,63237,64163,75209,78570,82944,94216,100856,101562,107057,108703,109462,110552,112426,112995,114394,118870,121071,123147,123851,125873,
#Deleted in new
chrX	10015794	10016862	chrX:10015794-10016862	0	+	10015794	10015794	8553170	2	64,467,	0,601,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	10024841	10038654	chrX:10024841-10038654	3	-	10024841	10024841	8553170	2	236,342,	0,13471,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	10061221	10061323	chrX:10061221-10061323	3	+	10061221	10061221	8553170	1	102,	0,
#Partially deleted in new
chrX	10156944	10237660	chrX:10156944-10237660	1	+	10194948	10233584	789624	11	156,263,188,123,207,81,546,187,399,217,4167,	0,1344,37966,40994,49413,49751,51100,55522,56736,63716,76549,
#Partially deleted in new
chrX	10156983	10237660	chrX:10156983-10237660	3	+	10185032	10233584	789624	13	117,263,155,100,188,123,207,81,546,187,399,217,4167,	0,1305,28038,30531,37927,40955,49374,49712,51061,55483,56697,63677,76510,
#Partially deleted in new
chrX	10158447	10233697	chrX:10158447-10233697	1	+	10185032	10233584	789624	13	104,155,100,188,123,207,81,137,316,187,399,217,204,	0,26574,29067,36463,39491,47910,48248,49597,49827,54019,55233,62213,75046,
#Partially deleted in new
chrX	10158531	10206719	chrX:10158531-10206719	0	+	10185032	10206719	789624	5	20,155,100,188,24,	0,26490,28983,36379,48164,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	10445309	10620634	chrX:10445309-10620634	1	-	10449367	10567547	0	10	4407,208,162,144,128,149,108,96,716,345,	0,9560,14336,24387,29313,37170,50274,77782,121578,174980,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	10445309	10677739	chrX:10445309-10677739	1	-	10449367	10567547	0	10	4407,208,162,144,128,149,108,96,716,275,	0,9560,14336,24387,29313,37170,50274,77782,121578,232155,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	10445555	10576955	chrX:10445555-10576955	1	-	10449367	10567547	0	10	4161,208,162,144,128,149,108,96,716,172,	0,9314,14090,24141,29067,36924,50028,77536,121332,131228,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	10445555	10589909	chrX:10445555-10589909	1	-	10449367	10567547	0	10	4161,208,162,144,128,149,108,96,716,323,	0,9314,14090,24141,29067,36924,50028,77536,121332,144031,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	10445555	10833643	chrX:10445555-10833643	1	-	10449367	10567547	0	11	4161,208,162,144,128,149,108,96,716,130,90,	0,9314,14090,24141,29067,36924,50028,77536,121332,174734,387998,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	10445555	10833654	chrX:10445555-10833654	3	-	10449367	10567547	0	10	4161,208,162,144,128,149,108,96,716,101,	0,9314,14090,24141,29067,36924,50028,77536,121332,387998,
#Partially deleted in new
chrX	10448105	10620419	chrX:10448105-10620419	1	-	10449612	10567547	0	10	1511,208,162,144,128,149,108,96,716,130,	0,6764,11540,21591,26517,34374,47478,74986,118782,172184,
#Partially deleted in new
chrX	10449463	10460042	chrX:10449463-10460042	0	-	10449463	10449463	8553170	3	253,208,397,	0,5406,10182,
#Partially deleted in new
chrX	10455074	10677687	chrX:10455074-10677687	0	-	10455074	10567547	789624	9	3,162,144,128,149,108,96,716,223,	0,4571,14622,19548,27405,40509,68017,111813,222390,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	10469264	10567603	chrX:10469264-10567603	1	-	10469511	10567547	789624	7	576,128,149,108,153,96,716,	0,5358,13215,26319,32142,53827,97623,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	10505344	10567603	chrX:10505344-10567603	1	-	10506440	10567547	789624	3	1141,96,602,	0,17747,61657,
#Partially deleted in new
chrX	10566954	10620585	chrX:10566954-10620585	0	-	10566954	10567547	789624	2	649,296,	0,53335,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	10582816	10582919	chrX:10582816-10582919	3	+	10582816	10582816	8553170	1	103,	0,
#Partially deleted in new
chrX	10847876	11111109	chrX:10847876-11111109	1	-	10847876	10847876	8553170	4	928,304,90,227,	0,12166,259024,263006,
#Partially deleted in new
chrX	10963370	11111138	chrX:10963370-11111138	3	-	10963370	10963370	8553170	5	573,106,55,90,256,	0,92565,130755,143530,147512,
#Partially deleted in new
chrX	10969890	11111114	chrX:10969890-11111114	0	-	10969890	10969890	8553170	4	648,101,90,232,	0,86045,137010,140992,
#Partially deleted in new
chrX	11111300	11123078	chrX:11111300-11123078	3	+	11112060	11121810	789624	7	160,142,152,149,120,87,1467,	0,718,3534,5966,7200,9606,10311,
#Partially deleted in new
chrX	11111341	11121879	chrX:11111341-11121879	1	+	11112060	11121810	789624	7	82,142,152,149,120,87,268,	0,677,3493,5925,7159,9565,10270,
#Partially deleted in new
chrX	11111364	11121879	chrX:11111364-11121879	1	+	11112060	11121810	789624	7	154,142,152,149,120,87,268,	0,654,3470,5902,7136,9542,10247,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	11116091	11116193	chrX:11116091-11116193	3	-	11116091	11116091	8553170	1	102,	0,
#Partially deleted in new
chrX	11137542	11427773	chrX:11137542-11427773	1	-	11138862	11254686	789624	13	1988,81,269,98,180,149,151,56,196,257,72,160,226,	0,4690,6437,18986,31962,40557,41759,44520,48693,51185,59382,117005,290005,
#Partially deleted in new
chrX	11137543	11265975	chrX:11137543-11265975	1	-	11138862	11254686	789624	13	1987,81,269,98,180,149,151,56,196,257,72,160,290,	0,4689,6436,18985,31961,40556,41758,44519,48692,51184,59381,117004,128142,
#Partially deleted in new
chrX	11137543	11665701	chrX:11137543-11665701	1	-	11138862	11664828	789624	13	1987,81,269,98,180,149,151,56,196,257,72,160,1461,	0,4689,6436,18985,31961,40556,41758,44519,48692,51184,59381,117004,526697,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chrX	11137543	11665701	chrX:11137543-11665701	2	-	11148649	11664828	789624	15	1987,81,269,90,98,180,149,151,56,196,257,72,160,96,1461,	0,4689,6436,11086,18985,31961,40556,41758,44519,48692,51184,59381,117004,152839,526697,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chrX	11137546	11665083	chrX:11137546-11665083	0	-	11137546	11137546	8553170	14	1984,2013,50,90,98,180,149,151,56,196,257,72,160,843,	0,4686,7525,11083,18982,31958,40553,41755,44516,48689,51181,59378,117001,526694,
#Partially deleted in new
chrX	11143396	11290478	chrX:11143396-11290478	0	-	11143857	11290478	789624	11	852,98,180,149,151,56,196,257,72,160,96,	0,13132,26108,34703,35905,38666,42839,45331,53528,111151,146986,
#Partially deleted in new
chrX	11143396	11665701	chrX:11143396-11665701	1	-	11143857	11664828	789624	11	852,98,180,149,151,56,196,257,72,160,1461,	0,13132,26108,34703,35905,38666,42839,45331,53528,111151,520844,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	11148583	11148769	chrX:11148583-11148769	3	-	11148583	11148583	8553170	1	186,	0,
#Partially deleted in new
chrX	11169155	11182074	chrX:11169155-11182074	0	-	11169155	11169155	8553170	4	529,149,151,12,	0,8944,10146,12907,
#Deleted in new
chrX	11221347	11225731	chrX:11221347-11225731	7	+	11221347	11221347	16724991	4	33,115,119,63,	0,1808,2873,4321,
#Deleted in new
chrX	11293412	11300753	chrX:11293412-11300753	1	+	11294788	11300612	789624	5	56,66,42,426,147,	0,1364,4823,5135,7194,
#Deleted in new
chrX	11293412	11300761	chrX:11293412-11300761	1	+	11294788	11300612	789624	7	56,66,48,42,42,426,155,	0,1364,3366,4690,4823,5135,7194,
#Deleted in new
chrX	11293412	11300761	chrX:11293412-11300761	3	+	11294788	11300612	789624	6	56,66,48,42,426,155,	0,1364,3366,4823,5135,7194,
#Partially deleted in new
chrX	11334232	11335901	chrX:11334232-11335901	7	-	11334232	11334232	16724991	2	976,214,	0,1455,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	11668400	11757718	chrX:11668400-11757718	3	-	11668400	11668400	8553170	4	790,105,31,967,	0,51221,87089,88351,
#Deleted in new
chrX	11704122	11705590	chrX:11704122-11705590	7	-	11704122	11704122	16724991	1	1468,	0,
#Partially deleted in new
chrX	11758158	11775772	chrX:11758158-11775772	1	+	11758263	11775079	0	13	207,83,96,101,83,123,161,159,263,110,100,85,793,	0,1634,2244,2678,3341,3971,4678,5621,7308,10414,13997,14462,16821,
#Partially deleted in new
chrX	11758158	11775747	chrX:11758158-11775747	1	+	11760919	11775079	0	12	207,83,96,101,123,161,159,263,110,100,85,768,	0,1634,2244,2678,3971,4678,5621,7308,10414,13997,14462,16821,
#Partially deleted in new
chrX	11758194	11775760	chrX:11758194-11775760	0	+	11758263	11760411	8553170	12	171,96,101,83,123,161,159,263,110,100,85,781,	0,2208,2642,3305,3935,4642,5585,7272,10378,13961,14426,16785,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	11758202	11767977	chrX:11758202-11767977	1	+	11758263	11765809	0	9	163,83,96,101,83,123,161,159,2511,	0,1590,2200,2634,3297,3927,4634,5577,7264,
#Partially deleted in new
chrX	11758204	11775628	chrX:11758204-11775628	1	+	11758263	11775079	8553170	13	161,83,96,101,83,123,161,159,260,110,100,85,649,	0,1588,2198,2632,3295,3925,4632,5575,7265,10368,13951,14416,16775,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	11758225	11769064	chrX:11758225-11769064	0	+	11758225	11758225	8553170	7	140,83,96,1416,161,1950,492,	0,1567,2177,2611,4611,5554,10347,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	11758249	11766267	chrX:11758249-11766267	0	+	11758249	11758249	8553170	8	116,83,96,101,83,123,161,2488,	0,1543,2153,2587,3250,3880,4587,5530,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	11758249	11769102	chrX:11758249-11769102	1	+	11758263	11768697	8553170	10	116,83,96,101,83,123,161,159,263,530,	0,1543,2153,2587,3250,3880,4587,5530,7217,10323,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	11758249	11768916	chrX:11758249-11768916	0	+	11758249	11758249	8553170	7	116,83,96,1416,161,159,3450,	0,1543,2153,2587,4587,5530,7217,
#Partially deleted in new
chrX	11758252	11775231	chrX:11758252-11775231	0	+	11758263	11762131	789624	12	113,83,96,101,123,161,159,263,110,100,85,252,	0,1540,2150,2584,3877,4584,5527,7214,10320,13903,14368,16727,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	11758257	11767876	chrX:11758257-11767876	0	+	11758257	11758257	8553170	6	108,83,96,1416,161,4097,	0,1535,2145,2579,4579,5522,
#Partially deleted in new
chrX	11758267	11775640	chrX:11758267-11775640	2	+	11758267	11775079	8553170	12	98,83,101,83,123,161,159,263,110,100,85,661,	0,1525,2569,3232,3862,4569,5512,7199,10305,13888,14353,16712,
#Partially deleted in new
chrX	11758555	11775726	chrX:11758555-11775726	1	+	11758707	11775079	0	13	218,83,96,101,83,123,161,159,263,110,100,85,747,	0,1237,1847,2281,2944,3574,4281,5224,6911,10017,13600,14065,16424,
#Deleted in new
chrX	11758581	11762219	chrX:11758581-11762219	0	+	11762162	11762219	789624	6	107,83,96,101,83,90,	0,1211,1821,2255,2918,3548,
#Deleted in new
chrX	11758630	11759320	chrX:11758630-11759320	1	+	11758707	11758872	8553170	1	690,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	11759401	11768999	chrX:11759401-11768999	0	+	11759401	11759401	8553170	7	474,96,101,83,123,161,5220,	0,1001,1435,2098,2728,3435,4378,
#Partially deleted in new
chrX	11759423	11775753	chrX:11759423-11775753	1	+	11762162	11775079	8553170	12	452,96,101,83,123,161,159,263,110,100,85,774,	0,979,1413,2076,2706,3413,4356,6043,9149,12732,13197,15556,
#Partially deleted in new
chrX	11759603	11775736	chrX:11759603-11775736	1	+	11762162	11775079	789624	13	109,83,96,101,83,123,161,159,263,110,100,85,757,	0,189,799,1233,1896,2526,3233,4176,5863,8969,12552,13017,15376,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	11759622	11775736	chrX:11759622-11775736	0	+	11759622	11759622	8553170	12	253,96,101,83,123,161,159,263,1722,100,85,757,	0,780,1214,1877,2507,3214,4157,5844,7338,12533,12998,15357,
#Partially deleted in new
chrX	11759625	11775731	chrX:11759625-11775731	1	+	11760919	11775079	8553170	11	250,96,101,123,161,159,263,110,100,85,752,	0,777,1211,2504,3211,4154,5841,8947,12530,12995,15354,
#Partially deleted in new
chrX	11759632	11775753	chrX:11759632-11775753	0	+	11762162	11768588	8553170	12	243,96,101,83,123,161,159,263,108,100,85,774,	0,770,1204,1867,2497,3204,4147,5834,8942,12523,12988,15347,
#Partially deleted in new
chrX	11759633	11775726	chrX:11759633-11775726	1	+	11762162	11775079	0	12	242,96,101,83,123,161,159,260,110,100,85,747,	0,769,1203,1866,2496,3203,4146,5836,8939,12522,12987,15346,
#Partially deleted in new
chrX	11759633	11775720	chrX:11759633-11775720	1	+	11760919	11775079	8553170	10	242,101,123,161,159,263,110,100,85,741,	0,1203,2496,3203,4146,5833,8939,12522,12987,15346,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	11759633	11775593	chrX:11759633-11775593	0	+	11759633	11759633	8553170	11	242,96,101,83,123,161,1950,110,100,85,614,	0,769,1203,1866,2496,3203,4146,8939,12522,12987,15346,
#Partially deleted in new
chrX	11759633	11775407	chrX:11759633-11775407	1	+	11760919	11775079	8553170	12	79,83,96,101,123,161,159,263,110,100,85,428,	0,159,769,1203,2496,3203,4146,5833,8939,12522,12987,15346,
#Deleted in new
chrX	11759640	11761054	chrX:11759640-11761054	0	+	11759640	11759640	8553170	3	235,96,218,	0,762,1196,
#Deleted in new
chrX	11759642	11763810	chrX:11759642-11763810	0	+	11762162	11763810	789624	6	233,101,83,123,161,31,	0,1194,1857,2487,3194,4137,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	11759644	11775640	chrX:11759644-11775640	0	+	11759644	11759644	8553170	10	231,96,101,83,123,161,4903,100,85,661,	0,758,1192,1855,2485,3192,4135,12511,12976,15335,
#Partially deleted in new
chrX	11759647	11775699	chrX:11759647-11775699	1	+	11762162	11775079	8553170	12	65,83,101,83,123,161,159,263,110,100,85,720,	0,145,1189,1852,2482,3189,4132,5819,8925,12508,12973,15332,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	11759656	11767950	chrX:11759656-11767950	1	+	11762162	11765809	8553170	8	219,96,101,83,123,161,159,2484,	0,746,1180,1843,2473,3180,4123,5810,
#Deleted in new
chrX	11759657	11763823	chrX:11759657-11763823	0	+	11762162	11763823	789624	6	55,101,83,123,161,44,	0,1179,1842,2472,3179,4122,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	11759686	11767979	chrX:11759686-11767979	1	+	11762162	11767163	8553170	9	189,96,101,83,123,161,159,263,1019,	0,716,1150,1813,2443,3150,4093,5780,7274,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	11759771	11767960	chrX:11759771-11767960	1	+	11762162	11765262	8553170	8	104,96,101,83,123,161,159,2768,	0,631,1065,1728,2358,3065,4008,5421,
#Partially deleted in new
chrX	11760042	11775677	chrX:11760042-11775677	1	+	11762162	11775079	8553170	11	456,101,83,123,161,159,263,110,100,85,698,	0,794,1457,2087,2794,3737,5424,8530,12113,12578,14937,
#Partially deleted in new
chrX	11760047	11775665	chrX:11760047-11775665	1	+	11762162	11775079	8553170	11	292,101,83,123,161,159,263,110,100,85,686,	0,789,1452,2082,2789,3732,5419,8525,12108,12573,14932,
#Partially deleted in new
chrX	11760092	11775731	chrX:11760092-11775731	1	+	11762162	11775079	8553170	12	217,96,101,83,123,161,159,263,110,100,85,752,	0,310,744,1407,2037,2744,3687,5374,8480,12063,12528,14887,
#Deleted in new
chrX	11760185	11762905	chrX:11760185-11762905	0	+	11760919	11762905	8553170	4	154,101,123,69,	0,651,1944,2651,
#Deleted in new
chrX	11760221	11764251	chrX:11760221-11764251	0	+	11760221	11760221	8553170	7	88,96,101,83,123,161,472,	0,181,615,1278,1908,2615,3558,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	11760909	11775735	chrX:11760909-11775735	0	+	11760909	11760909	8553170	7	1343,161,1950,110,100,85,756,	0,1927,2870,7663,11246,11711,14070,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	11762129	11775753	chrX:11762129-11775753	0	+	11762129	11762129	8553170	6	123,161,1950,100,85,774,	0,707,1650,10026,10491,12850,
#Partially deleted in new
chrX	11762887	11772168	chrX:11762887-11772168	0	+	11762887	11765603	789624	5	110,159,208,110,13,	0,892,2634,5685,9268,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	11765537	11769097	chrX:11765537-11769097	0	+	11765537	11768588	8553170	2	192,523,	0,3037,
#Partially deleted in new
chrX	11765537	11775753	chrX:11765537-11775753	0	+	11765537	11768614	8553170	6	192,44,110,100,85,774,	0,2281,3035,6618,7083,9442,
#Partially deleted in new
chrX	11765537	11775740	chrX:11765537-11775740	0	+	11765537	11767163	8553170	6	192,209,61,100,85,761,	0,1423,3084,6618,7083,9442,
#Partially deleted in new
chrX	11765537	11775750	chrX:11765537-11775750	0	+	11765537	11774987	8553170	4	192,110,100,771,	0,3035,6618,9442,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	11765537	11767977	chrX:11765537-11767977	0	+	11765537	11767177	8553170	3	192,92,833,	0,1423,1607,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	11765537	11767977	chrX:11765537-11767977	0	+	11765537	11767260	8553170	2	192,833,	0,1607,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	11765537	11769102	chrX:11765537-11769102	0	+	11765537	11767177	8553170	4	192,86,142,530,	0,1423,1607,3035,
#Partially deleted in new
chrX	11765537	11767986	chrX:11765537-11767986	0	+	11765537	11767163	8553170	3	192,209,168,	0,1423,2281,
#Partially deleted in new
chrX	11765597	11767976	chrX:11765597-11767976	0	+	11765597	11767177	8553170	4	132,92,142,158,	0,1363,1547,2221,
#Deleted in new
chrX	12054823	12054926	chrX:12054823-12054926	3	-	12054823	12054823	8553170	1	103,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chrX	12138465	12724523	chrX:12138465-12724523	3	+	12138971	12720533	0	17	547,117,161,103,46,105,108,132,120,137,127,90,183,139,1065,1290,3995,	0,360214,471255,476313,536397,545017,547631,551729,555869,563408,565893,568360,569003,571933,577603,579035,582063,
#Partially deleted in new
chrX	12149125	12149238	chrX:12149125-12149238	3	+	12149125	12149125	8553170	1	113,	0,
#Partially deleted in new
chrX	12373166	12375133	chrX:12373166-12375133	3	-	12373166	12373166	8553170	2	95,190,	0,1777,
#Deleted in new
chrX	12395756	12396167	chrX:12395756-12396167	7	-	12395756	12395756	16724991	1	411,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chrX	12498672	12724514	chrX:12498672-12724514	1	+	12498758	12720533	789624	17	124,161,103,46,105,108,132,120,137,127,90,177,6,139,1065,1290,3986,	0,111048,116106,176190,184810,187424,191522,195662,203201,205686,208153,208796,210268,211726,217396,218828,221856,
#Deleted in new
chrX	12583414	12583526	chrX:12583414-12583526	7	-	12583414	12583414	16724991	1	112,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	12614002	12614197	chrX:12614002-12614197	3	-	12614002	12614002	8553170	1	195,	0,
#Deleted in new
chrX	12718712	12721858	chrX:12718712-12721858	0	+	12718712	12721858	789624	2	78,1325,	0,1821,
#Partially deleted in new
chrX	12791354	12810119	chrX:12791354-12810119	0	+	12791497	12810119	789624	4	265,184,99,36,	0,7852,17879,18729,
#Partially deleted in new
chrX	12791369	12824222	chrX:12791369-12824222	3	+	12791497	12822796	789624	7	250,184,99,125,174,160,1519,	0,7837,17864,18652,28137,29274,31334,
#Partially deleted in new
chrX	12791405	12823086	chrX:12791405-12823086	1	+	12791497	12822796	789624	7	214,193,99,125,174,160,383,	0,7801,17828,18616,28101,29238,31298,
#Partially deleted in new
chrX	12791487	12810369	chrX:12791487-12810369	1	+	12791497	12810219	789624	4	132,184,99,348,	0,7719,17746,18534,
#Partially deleted in new
chrX	12799354	12823165	chrX:12799354-12823165	0	+	12799354	12822796	789624	5	45,99,125,160,462,	0,9879,10667,21289,23349,
#Partially deleted in new
chrX	12825839	12826833	chrX:12825839-12826833	7	+	12825839	12825839	16724991	2	521,165,	0,829,
#Deleted in new
chrX	12844864	12845430	chrX:12844864-12845430	7	-	12844864	12844864	16724991	1	566,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	12867082	12890380	chrX:12867082-12890380	3	+	12867578	12888658	789624	3	41,101,4869,	0,398,18429,
#Partially deleted in new
chrX	12867478	12877639	chrX:12867478-12877639	0	+	12867478	12867478	8553170	2	103,196,	0,9965,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	12906619	12923169	chrX:12906619-12923169	1	+	12906706	12922166	0	2	90,4126,	0,12424,
#Partially deleted in new
chrX	12906638	12922202	chrX:12906638-12922202	3	+	12910385	12922166	0	3	71,137,3159,	0,3667,12405,
#Deleted in new
chrX	12975107	12977227	chrX:12975107-12977227	3	+	12976261	12976811	0	3	61,116,451,	0,1138,1669,
#Deleted in new
chrX	12975109	12977226	chrX:12975109-12977226	1	+	12976261	12976811	0	2	1252,450,	0,1667,
#Deleted in new
chrX	12975243	12977227	chrX:12975243-12977227	1	+	12976261	12976811	0	3	200,116,451,	0,1002,1533,
#Deleted in new
chrX	12975657	12977081	chrX:12975657-12977081	1	+	12976261	12976811	0	3	74,116,305,	0,588,1119,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	13035617	13044682	chrX:13035617-13044682	1	-	13042744	13043789	789624	6	2886,109,2470,121,129,143,	0,4190,4862,7510,8111,8922,
#Partially deleted in new
chrX	13035632	13044681	chrX:13035632-13044681	3	-	13038440	13043789	789624	8	386,88,109,115,32,121,129,142,	0,2783,4175,5125,7285,7495,8096,8907,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	13035632	13044681	chrX:13035632-13044681	0	-	13035632	13035632	8553170	7	386,88,109,2470,121,129,142,	0,2783,4175,4847,7495,8096,8907,
#Partially deleted in new
chrX	13035711	13044602	chrX:13035711-13044602	1	-	13038440	13043789	789624	7	2792,109,115,32,121,129,63,	0,4096,5046,7206,7416,8017,8828,
#Partially deleted in new
chrX	13038348	13043188	chrX:13038348-13043188	0	-	13038440	13043188	789624	5	155,109,115,32,61,	0,1459,2409,4569,4779,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	13093659	13094573	chrX:13093659-13094573	3	+	13093659	13093659	8553170	1	914,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	13266047	13303392	chrX:13266047-13303392	3	-	13266047	13266047	8553170	3	1288,136,73,	0,21381,37272,
#Partially deleted in new
chrX	13310651	13319933	chrX:13310651-13319933	3	+	13310651	13310651	789624	17	91,67,59,12,26,71,413,110,55,72,125,70,87,141,49,486,315,	0,204,378,1050,1181,1409,1583,2110,2375,2617,3837,4346,4873,5910,8136,8356,8967,
#Deleted in new
chrX	13318235	13320399	chrX:13318235-13320399	3	-	13318866	13319934	0	1	2164,	0,
#Deleted in new
chrX	13318961	13319952	chrX:13318961-13319952	1	-	13319294	13319934	789624	3	357,228,252,	0,358,739,
#Deleted in new
chrX	13327936	13329867	chrX:13327936-13329867	7	+	13327936	13327936	16724991	6	22,71,412,107,55,72,	0,653,827,1356,1617,1859,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	13334775	13397878	chrX:13334775-13397878	3	+	13334775	13334775	8553170	11	313,101,64,82,54,224,115,83,146,131,143,	0,436,706,1603,3119,37473,38741,40625,42414,60486,62960,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	13335240	13341825	chrX:13335240-13341825	1	+	13335240	13335240	789624	7	72,64,39,82,54,174,95,	0,241,418,1138,2654,4685,6490,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	13377187	13403019	chrX:13377187-13403019	1	+	13377187	13377187	8553170	2	148,305,	0,25527,
#Deleted in new
chrX	13378734	13379340	chrX:13378734-13379340	7	-	13378734	13378734	16724991	1	606,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	13395259	13403006	chrX:13395259-13403006	0	+	13395259	13395259	8553170	2	133,292,	0,7455,
#Partially deleted in new
chrX	13569604	13633574	chrX:13569604-13633574	3	+	13569861	13633095	789624	12	331,113,93,120,120,135,123,324,81,102,266,590,	0,19951,25231,30370,33712,36774,38719,48125,49558,54219,57406,63380,
#Partially deleted in new
chrX	13569621	13633575	chrX:13569621-13633575	1	+	13569861	13633095	789624	12	314,113,93,120,120,135,123,324,81,105,266,591,	0,19934,25214,30353,33695,36757,38702,48108,49541,54199,57389,63363,
#Partially deleted in new
chrX	13574745	13575066	chrX:13574745-13575066	7	+	13574745	13574745	16724991	1	321,	0,
#Deleted in new
chrX	13590291	13590346	chrX:13590291-13590346	3	+	13590291	13590291	5263520	1	55,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	13596235	13596548	chrX:13596235-13596548	3	+	13596235	13596235	8553170	1	313,	0,
#Partially deleted in new
chrX	13623818	13627064	chrX:13623818-13627064	0	+	13623818	13623818	8553170	3	107,203,54,	0,1228,3192,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	13653188	13664828	chrX:13653188-13664828	0	+	13653188	13653188	8553170	3	124,85,2328,	0,2100,9312,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	13655294	13665409	chrX:13655294-13665409	1	+	13662508	13663564	789624	2	79,2909,	0,7206,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	13662743	13681964	chrX:13662743-13681964	0	+	13662743	13666317	789624	5	817,154,700,110,826,	0,3573,4940,17745,18395,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	13666075	13668169	chrX:13666075-13668169	0	+	13666075	13666075	8553170	2	395,486,	0,1608,
#Partially deleted in new
chrX	13689124	13710506	chrX:13689124-13710506	3	+	13708746	13709352	0	3	164,89,1786,	0,14689,19596,
#Partially deleted in new
chrX	13689160	13708817	chrX:13689160-13708817	0	+	13708746	13708817	789624	3	128,168,97,	0,14574,19560,
#Partially deleted in new
chrX	13689185	13709354	chrX:13689185-13709354	1	+	13708746	13709352	0	2	103,634,	0,19535,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	13712243	13734635	chrX:13712243-13734635	3	-	13714406	13719963	789624	5	2262,86,145,112,111,	0,3760,4290,7627,22281,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	13712246	13734556	chrX:13712246-13734556	1	-	13714406	13719963	789624	6	2259,86,145,112,142,32,	0,3757,4287,7624,21797,22278,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	13714357	13734575	chrX:13714357-13734575	1	-	13714406	13734132	789624	6	148,86,145,112,136,51,	0,1646,2176,5513,19692,20167,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	13715496	13722240	chrX:13715496-13722240	0	-	13715496	13715496	8553170	3	593,145,2370,	0,1037,4374,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	13715536	13734545	chrX:13715536-13734545	0	-	13715536	13715536	8553170	4	1142,112,136,21,	0,4334,18513,18988,
#Deleted in new
chrX	13715799	13716718	chrX:13715799-13716718	0	-	13715799	13715799	8553170	2	290,185,	0,734,
#Partially deleted in new
chrX	13715836	13734575	chrX:13715836-13734575	1	-	13715985	13719963	789624	4	253,145,112,51,	0,697,4034,18688,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	13716549	13734633	chrX:13716549-13734633	0	-	13716549	13719963	789624	5	129,112,70,142,109,	0,3321,3878,17494,17975,
#Partially deleted in new
chrX	13734744	13769353	chrX:13734744-13769353	3	+	13735071	13769108	789624	23	339,99,201,69,31,105,137,174,107,120,74,92,190,131,112,606,127,101,111,158,171,68,288,	0,503,1733,4101,4257,9670,11574,12035,14682,16504,18623,20406,21833,22915,23592,25370,26340,27599,29000,32382,33309,33973,34321,
#Partially deleted in new
chrX	13734744	13769353	chrX:13734744-13769353	1	+	13744422	13769108	789624	24	339,99,201,69,31,125,105,137,174,107,120,74,92,190,131,112,606,127,101,111,158,171,68,288,	0,503,1733,4101,4257,5344,9670,11574,12035,14682,16504,18623,20406,21833,22915,23592,25370,26340,27599,29000,32382,33309,33973,34321,
#Deleted in new
chrX	13734756	13736547	chrX:13734756-13736547	0	+	13734756	13734756	8553170	4	327,99,189,70,	0,491,1351,1721,
#Partially deleted in new
chrX	13734760	13769353	chrX:13734760-13769353	0	+	13734760	13734760	8553170	23	323,99,201,69,31,105,137,174,107,120,738,92,190,131,112,606,127,101,111,158,171,68,288,	0,487,1717,4085,4241,9654,11558,12019,14666,16488,17943,20390,21817,22899,23576,25354,26324,27583,28984,32366,33293,33957,34305,
#Partially deleted in new
chrX	13734897	13769311	chrX:13734897-13769311	1	+	13735071	13769108	789624	22	186,99,201,69,31,105,137,174,107,74,92,190,131,112,606,127,101,111,158,171,68,246,	0,350,1580,3948,4104,9517,11421,11882,14529,18470,20253,21680,22762,23439,25217,26187,27446,28847,32229,33156,33820,34168,
#Partially deleted in new
chrX	13734897	13769311	chrX:13734897-13769311	1	+	13740210	13760120	789624	24	186,99,201,69,31,125,15,6,82,137,174,107,74,92,190,131,606,127,101,111,158,171,68,246,	0,350,1580,3948,4104,5191,9517,9533,9540,11421,11882,14529,18470,20253,21680,22762,25217,26187,27446,28847,32229,33156,33820,34168,
#Deleted in new
chrX	13738693	13739314	chrX:13738693-13739314	0	+	13738693	13738693	8553170	2	221,313,	0,308,
#Partially deleted in new
chrX	13760639	13769171	chrX:13760639-13769171	0	+	13760639	13760639	8553170	7	81,127,101,158,171,68,106,	0,445,1704,6487,7414,8078,8426,
#Deleted in new
chrX	13767904	13769173	chrX:13767904-13769173	0	+	13767904	13767904	8553170	3	320,68,108,	0,813,1161,
#Partially deleted in new
chrX	13771030	13817342	chrX:13771030-13817342	1	-	13772880	13816904	789624	8	2000,66,74,172,157,187,120,499,	0,5207,6321,8787,12334,14591,36619,45813,
#Partially deleted in new
chrX	13771455	13938638	chrX:13771455-13938638	3	-	13774543	13938510	789624	7	3169,66,74,172,157,187,132,	0,4782,5896,8362,11909,14166,167051,
#Partially deleted in new
chrX	13772698	13817069	chrX:13772698-13817069	1	-	13772880	13807752	789624	9	332,66,74,172,157,187,120,38,226,	0,3539,4653,7119,10666,12923,34951,40172,44145,
#Partially deleted in new
chrX	13772853	13781005	chrX:13772853-13781005	0	-	13772853	13772853	8553170	5	177,66,74,172,91,	0,3384,4498,6964,8061,
#Partially deleted in new
chrX	13773953	13817069	chrX:13773953-13817069	1	-	13774543	13816904	789624	8	671,66,74,172,157,187,120,226,	0,2284,3398,5864,9411,11668,33696,42890,
#Partially deleted in new
chrX	13773953	13817346	chrX:13773953-13817346	1	-	13774543	13816904	789624	7	671,66,74,172,157,187,503,	0,2284,3398,5864,9411,11668,42890,
#Partially deleted in new
chrX	13774336	13938415	chrX:13774336-13938415	1	-	13774543	13783511	789624	7	288,66,74,172,157,187,89,	0,1901,3015,5481,9028,11285,163990,
#Partially deleted in new
chrX	13776166	13783921	chrX:13776166-13783921	0	-	13776166	13776166	8553170	5	137,74,172,157,143,	0,1185,3651,7198,7612,
#Partially deleted in new
chrX	13779852	13889057	chrX:13779852-13889057	0	-	13779852	13783511	789624	4	137,157,187,77,	0,3512,5769,109128,
#Partially deleted in new
chrX	13779907	13889612	chrX:13779907-13889612	0	-	13779907	13783511	789624	4	82,157,187,161,	0,3457,5714,109544,
#Partially deleted in new
chrX	13783448	13817323	chrX:13783448-13817323	0	-	13783448	13816904	789624	4	73,187,352,66,	0,2173,33395,33809,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	13955392	13963904	chrX:13955392-13963904	3	+	13955392	13955392	8553170	2	236,460,	0,8052,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	13980065	13988820	chrX:13980065-13988820	3	-	13980065	13980065	8553170	2	413,131,	0,8624,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	14008278	14029892	chrX:14008278-14029892	3	-	14008912	14021478	789624	5	891,457,48,170,116,	0,11799,13185,17773,21498,
#Partially deleted in new
chrX	14008672	14029893	chrX:14008672-14029893	1	-	14008912	14021478	789624	4	497,457,48,117,	0,11405,12791,21104,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	14009110	14029615	chrX:14009110-14029615	0	-	14009110	14021478	789624	5	59,457,48,82,222,	0,10967,12353,17029,20283,
#Partially deleted in new
chrX	14014207	14020587	chrX:14014207-14020587	0	-	14014207	14014207	8553170	2	329,510,	0,5870,
#Partially deleted in new
chrX	14020076	14027144	chrX:14020076-14027144	0	-	14020076	14020076	8553170	4	458,48,82,136,	0,1387,6063,6932,
#Deleted in new
chrX	14244381	14244928	chrX:14244381-14244928	7	+	14244381	14244381	16724991	1	547,	0,
#Partially deleted in new
chrX	14529297	14731809	chrX:14529297-14731809	1	+	14574397	14730485	789624	11	222,178,207,134,28,224,83,138,215,150,1603,	0,650,1674,2941,45075,51885,75017,77833,79693,161412,200909,
#Partially deleted in new
chrX	14529527	14731812	chrX:14529527-14731812	3	+	14530057	14730485	789624	9	598,134,68,224,83,138,215,150,1606,	0,2711,44805,51655,74787,77603,79463,161182,200679,
#Partially deleted in new
chrX	14529771	14730570	chrX:14529771-14730570	1	+	14530057	14730485	789624	9	354,134,68,224,83,138,215,150,364,	0,2467,44720,51411,74543,77359,79219,160938,200435,
#Partially deleted in new
chrX	14531145	14607247	chrX:14531145-14607247	0	+	14531158	14607247	789624	6	33,134,68,224,83,117,	0,1093,43187,50037,73169,75985,
#Partially deleted in new
chrX	14834475	14835319	chrX:14834475-14835319	7	-	14834475	14834475	16724991	1	844,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	14835960	14869029	chrX:14835960-14869029	0	-	14862281	14865510	789624	11	295,322,238,431,170,129,93,153,81,1021,107,	0,7699,8542,8895,14544,17078,21901,23221,26291,28599,32962,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	14843404	14869004	chrX:14843404-14869004	0	-	14862281	14865510	789624	10	577,238,431,170,129,93,66,81,1021,82,	0,1098,1451,7100,9634,14457,15777,18847,21155,25518,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	14843406	14873069	chrX:14843406-14873069	3	-	14843566	14865510	789624	9	575,238,431,170,129,93,153,1021,84,	0,1096,1449,7098,9632,14455,15775,21153,29579,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	14843406	14873062	chrX:14843406-14873062	1	-	14843566	14865510	789624	10	575,238,431,170,129,93,153,1021,121,77,	0,1096,1449,7098,9632,14455,15775,21153,25516,29579,
#Partially deleted in new
chrX	14843692	14873052	chrX:14843692-14873052	0	-	14843692	14865510	789624	10	289,238,431,170,129,93,153,1021,121,67,	0,810,1163,6812,9346,14169,15489,20867,25230,29293,
#Partially deleted in new
chrX	14865342	14869243	chrX:14865342-14869243	0	-	14865342	14865342	8553170	2	238,321,	0,3580,
#Partially deleted in new
chrX	14873440	14922327	chrX:14873440-14922327	3	+	14873528	14919809	789624	15	97,70,156,87,155,61,39,125,177,113,97,97,130,103,2656,	0,248,19282,21867,23643,27134,29525,35419,37796,38808,41062,42227,42756,45239,46231,
#Partially deleted in new
chrX	14873454	14921756	chrX:14873454-14921756	1	+	14873528	14921421	789624	15	83,70,156,87,155,61,39,125,177,113,97,97,130,103,377,	0,234,19268,21853,23629,27120,29511,35405,37782,38794,41048,42213,42742,45225,47925,
#Partially deleted in new
chrX	14873490	14893353	chrX:14873490-14893353	0	+	14873490	14873490	8553170	3	47,70,631,	0,198,19232,
#Deleted in new
chrX	14873528	14874454	chrX:14873528-14874454	1	+	14873528	14873799	789624	2	9,766,	0,160,
#Partially deleted in new
chrX	14885290	14920002	chrX:14885290-14920002	0	+	14885290	14885290	8553170	14	167,156,87,155,61,39,125,177,113,97,97,130,103,331,	0,7432,10017,11793,15284,17675,23569,25946,26958,29212,30377,30906,33389,34381,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	14908921	14915588	chrX:14908921-14915588	0	+	14908921	14915457	789624	5	63,177,113,97,155,	0,2315,3327,5581,6512,
#Deleted in new
chrX	14977958	14978463	chrX:14977958-14978463	7	-	14977958	14977958	16724991	1	505,	0,
#Deleted in new
chrX	15117436	15117768	chrX:15117436-15117768	7	-	15117436	15117436	16724991	1	332,	0,
#Partially deleted in new
chrX	15243986	15270051	chrX:15243986-15270051	1	-	15248714	15269874	0	7	644,253,105,151,108,80,271,	0,4696,6443,8267,10750,14879,25794,
#Partially deleted in new
chrX	15243986	15270061	chrX:15243986-15270061	1	-	15248714	15269874	0	7	644,253,135,151,108,80,281,	0,4696,6443,8267,10750,14879,25794,
#Partially deleted in new
chrX	15243986	15270148	chrX:15243986-15270148	3	-	15244505	15269874	0	7	644,192,135,151,108,80,368,	0,4757,6443,8267,10750,14879,25794,
#Partially deleted in new
chrX	15243988	15270467	chrX:15243988-15270467	1	-	15248714	15269874	0	8	642,253,135,151,108,80,229,349,	0,4694,6441,8265,10748,14877,25792,26130,
#Partially deleted in new
chrX	15244289	15270013	chrX:15244289-15270013	0	-	15244289	15244289	8553170	7	341,192,135,64,108,80,233,	0,4454,6140,7964,10447,14576,25491,
#Partially deleted in new
chrX	15250465	15259124	chrX:15250465-15259124	0	-	15250465	15250465	8553170	4	69,151,108,259,	0,1788,4271,8400,
#Partially deleted in new
chrX	15250469	15258974	chrX:15250469-15258974	0	-	15250469	15250469	8553170	4	95,151,108,109,	0,1784,4267,8396,
#Partially deleted in new
chrX	15250529	15270159	chrX:15250529-15270159	0	-	15250529	15250529	8553170	6	35,151,108,80,229,41,	0,1724,4207,8336,19251,19589,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	15281696	15315624	chrX:15281696-15315624	1	-	15283504	15315605	0	7	1933,192,135,151,57,80,200,	0,6184,7807,11473,15877,21031,33728,
#Partially deleted in new
chrX	15282318	15314559	chrX:15282318-15314559	1	-	15283504	15314486	0	7	1311,192,135,151,108,80,191,	0,5562,7185,10851,15255,20409,32050,
#Partially deleted in new
chrX	15283043	15315656	chrX:15283043-15315656	3	-	15283504	15315605	0	7	586,192,135,151,108,80,232,	0,4837,6460,10126,14530,19684,32381,
#Partially deleted in new
chrX	15319450	15335580	chrX:15319450-15335580	3	-	15321505	15331930	789624	6	2322,207,133,133,777,80,	0,5214,5569,6463,11765,16050,
#Partially deleted in new
chrX	15319451	15330975	chrX:15319451-15330975	0	-	15319451	15319451	8553170	5	2321,207,133,133,56,	0,5213,5568,6462,11468,
#Partially deleted in new
chrX	15319454	15335429	chrX:15319454-15335429	1	-	15321505	15331930	789624	6	2318,207,133,133,777,58,	0,5210,5565,6459,11761,15917,
#Partially deleted in new
chrX	15319455	15335523	chrX:15319455-15335523	0	-	15319455	15319455	8553170	5	2317,488,133,777,23,	0,5209,6458,11760,16045,
#Partially deleted in new
chrX	15319456	15335554	chrX:15319456-15335554	0	-	15326030	15331930	789624	6	2316,207,133,133,403,54,	0,5208,5563,6457,12133,16044,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	15319474	15335523	chrX:15319474-15335523	0	-	15327145	15331930	789624	7	2298,207,133,133,306,777,23,	0,5190,5545,6439,7475,11741,16026,
#Partially deleted in new
chrX	15319499	15335544	chrX:15319499-15335544	0	-	15326022	15331930	789624	6	2273,207,133,133,173,44,	0,5165,5520,6414,12320,16001,
#Partially deleted in new
chrX	15320358	15335523	chrX:15320358-15335523	1	-	15321505	15325055	789624	7	1414,207,133,133,84,119,23,	0,4306,4661,5555,10857,11515,15142,
#Partially deleted in new
chrX	15321324	15335544	chrX:15321324-15335544	1	-	15321505	15335513	789624	5	448,207,133,133,44,	0,3340,3695,4589,14176,
#Partially deleted in new
chrX	15321426	15335503	chrX:15321426-15335503	1	-	15321505	15331930	789624	5	346,207,133,403,3,	0,3238,3593,10163,14074,
#Partially deleted in new
chrX	15321564	15335554	chrX:15321564-15335554	0	-	15321564	15325055	789624	6	208,207,133,133,119,54,	0,3100,3455,4349,10309,13936,
#Partially deleted in new
chrX	15321700	15325100	chrX:15321700-15325100	0	-	15321700	15325100	789624	2	72,81,	0,3319,
#Partially deleted in new
chrX	15321712	15325272	chrX:15321712-15325272	0	-	15321712	15321712	8553170	3	60,207,253,	0,2952,3307,
#Deleted in new
chrX	15324731	15326383	chrX:15324731-15326383	0	-	15324731	15324731	8553170	3	140,133,470,	0,288,1182,
#Partially deleted in new
chrX	15324785	15331723	chrX:15324785-15331723	0	-	15328371	15331723	789624	5	86,133,133,194,134,	0,234,1128,3558,6804,
#Partially deleted in new
chrX	15325606	15335523	chrX:15325606-15335523	0	-	15325606	15325606	8553170	3	440,119,23,	0,6267,9894,
#Partially deleted in new
chrX	15325969	15328243	chrX:15325969-15328243	0	-	15325969	15325969	8553170	2	77,23,	0,2251,
#Deleted in new
chrX	15327636	15328956	chrX:15327636-15328956	0	-	15327636	15327636	8553170	1	1320,	0,
#Partially deleted in new
chrX	15331473	15335407	chrX:15331473-15335407	0	-	15331473	15331930	789624	2	519,53,	0,3881,
#Partially deleted in new
chrX	15345590	15384376	chrX:15345590-15384376	3	-	15346132	15383946	0	7	669,196,101,149,191,211,520,	0,1573,7477,9559,12412,17518,38266,
#Partially deleted in new
chrX	15345971	15347475	chrX:15345971-15347475	0	-	15345971	15345971	8553170	2	288,312,	0,1192,
#Partially deleted in new
chrX	15384798	15493341	chrX:15384798-15493341	1	-	15385003	15491257	0	10	318,67,83,45,85,207,84,93,148,152,	0,5386,12650,22707,41107,71049,74858,94930,106363,108391,
#Partially deleted in new
chrX	15384798	15493564	chrX:15384798-15493564	3	-	15385003	15491257	0	10	318,67,83,45,85,207,84,93,148,409,	0,5386,12650,22707,41107,71049,74858,94930,106363,108357,
#Partially deleted in new
chrX	15384798	15407653	chrX:15384798-15407653	0	-	15384798	15384798	8553170	4	318,67,83,148,	0,5386,12650,22707,
#Partially deleted in new
chrX	15389962	15407550	chrX:15389962-15407550	0	-	15389962	15389962	8553170	3	289,83,45,	0,7486,17543,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	15429374	15491207	chrX:15429374-15491207	0	-	15429374	15429374	8553170	5	474,207,84,93,46,	0,26473,30282,50354,61787,
#Partially deleted in new
chrX	15464245	15556529	chrX:15464245-15556529	3	+	15508353	15556147	0	19	179,147,105,82,120,65,242,78,54,55,80,128,75,172,217,65,119,158,457,	0,44099,45083,47191,51866,53683,58100,61042,61796,65727,67082,69966,72107,72888,77736,78825,82557,85594,91827,
#Partially deleted in new
chrX	15478415	15493288	chrX:15478415-15493288	0	-	15478415	15478415	8553170	4	174,93,148,99,	0,1313,12746,14774,
#Partially deleted in new
chrX	15500828	15556529	chrX:15500828-15556529	1	+	15508353	15556147	0	19	112,147,105,82,120,65,242,78,54,55,80,128,75,172,217,65,119,158,457,	0,7516,8500,10608,15283,17100,21517,24459,25213,29144,30499,33383,35524,36305,41153,42242,45974,49011,55244,
#Partially deleted in new
chrX	15507313	15517963	chrX:15507313-15517963	0	+	15507313	15507313	8553170	6	96,116,105,82,120,35,	0,1062,2015,4123,8798,10615,
#Partially deleted in new
chrX	15507317	15556517	chrX:15507317-15556517	1	+	15508353	15556147	0	19	92,147,105,82,120,65,242,78,54,55,80,128,75,172,217,65,119,158,445,	0,1027,2011,4119,8794,10611,15028,17970,18724,22655,24010,26894,29035,29816,34664,35753,39485,42522,48755,
#Partially deleted in new
chrX	15525287	15537305	chrX:15525287-15537305	0	+	15525287	15525287	8553170	6	78,54,55,80,75,172,	0,754,4685,6040,11065,11846,
#Partially deleted in new
chrX	15561032	15601014	chrX:15561032-15601014	1	-	15561904	15600911	0	18	981,195,117,101,59,173,123,99,145,227,170,98,106,113,144,94,159,289,	0,2991,5220,6693,9262,10591,11168,12334,14633,17056,20188,24442,26720,28311,30680,31196,33812,39693,
#Partially deleted in new
chrX	15561032	15602069	chrX:15561032-15602069	3	-	15561904	15600911	0	19	981,195,117,101,59,173,123,99,145,227,170,98,106,113,144,94,159,289,114,	0,2991,5220,6693,9262,10591,11168,12334,14633,17056,20188,24442,26720,28311,30680,31196,33812,39693,40923,
#Partially deleted in new
chrX	15561035	15566287	chrX:15561035-15566287	0	-	15561035	15561035	8553170	4	270,498,195,35,	0,480,2988,5217,
#Partially deleted in new
chrX	15561046	15675608	chrX:15561046-15675608	3	-	15600989	15659062	8553170	20	967,195,117,123,99,145,227,170,98,106,113,144,94,159,289,195,114,86,59,166,	0,2977,5206,11154,12320,14619,17042,20174,24428,26706,28297,30666,31182,33798,39679,78515,83869,97969,103290,114396,
#Partially deleted in new
chrX	15561879	15566709	chrX:15561879-15566709	0	-	15561879	15561879	8553170	3	134,195,457,	0,2144,4373,
#Partially deleted in new
chrX	15594886	15602148	chrX:15594886-15602148	0	-	15594886	15594886	8553170	3	117,289,193,	0,5839,7069,
#Partially deleted in new
chrX	15602880	15621484	chrX:15602880-15621484	3	+	15602880	15602880	789624	2	101,473,	0,18131,
#Partially deleted in new
chrX	15627317	15665031	chrX:15627317-15665031	3	-	15627970	15664775	789624	6	810,195,114,86,59,314,	0,12244,17598,31698,37019,37400,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	15627438	15675012	chrX:15627438-15675012	1	-	15627970	15659062	8553170	7	689,195,114,86,59,407,24,	0,12123,17477,31577,36898,40091,47550,
#Deleted in new
chrX	15646166	15646875	chrX:15646166-15646875	7	-	15646166	15646166	16724991	2	220,391,	0,318,
#Partially deleted in new
chrX	15674931	15697751	chrX:15674931-15697751	5	+	15674931	15674931	16724991	4	37,198,96,512,	0,13729,18031,22308,
#Partially deleted in new
chrX	15675545	15703724	chrX:15675545-15703724	5	+	15675545	15675545	16724991	4	27,198,96,943,	0,13115,17417,27236,
#Partially deleted in new
chrX	15675714	15703349	chrX:15675714-15703349	6	+	15675714	15675714	16724991	4	64,198,96,568,	0,12946,17248,27067,
#Partially deleted in new
chrX	15676293	15697460	chrX:15676293-15697460	4	+	15676293	15676293	16724991	5	92,47,198,96,221,	0,4707,12367,16669,20946,
#Partially deleted in new
chrX	15681052	15703192	chrX:15681052-15703192	5	+	15681052	15681052	16724991	6	135,198,96,63,161,411,	0,7608,11910,14618,16552,21729,
#Partially deleted in new
chrX	15688829	15764665	chrX:15688829-15764665	0	+	15750023	15764665	789624	5	29,96,80,195,88,	0,32667,56801,61141,75748,
#Deleted in new
chrX	15702601	15703243	chrX:15702601-15703243	7	-	15702601	15702601	16724991	2	126,513,	0,129,
#Deleted in new
chrX	15716207	15716346	chrX:15716207-15716346	3	+	15716207	15716207	8553170	1	139,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	15738269	15788409	chrX:15738269-15788409	3	+	15750023	15782664	789624	8	83,195,198,119,96,63,156,5925,	0,11701,26308,34226,36032,36976,38444,44215,
#Partially deleted in new
chrX	15738288	15750484	chrX:15738288-15750484	0	+	15738288	15738288	8553170	2	64,514,	0,11682,
#Partially deleted in new
chrX	15738305	15750408	chrX:15738305-15750408	0	+	15738305	15738305	8553170	3	47,80,438,	0,7325,11665,
#Partially deleted in new
chrX	15738309	15764911	chrX:15738309-15764911	0	+	15738309	15738309	8553170	4	43,80,195,334,	0,7321,11661,26268,
#Partially deleted in new
chrX	15749902	15772563	chrX:15749902-15772563	0	+	15750023	15772563	789624	3	263,198,68,	0,14675,22593,
#Partially deleted in new
chrX	15749919	15763044	chrX:15749919-15763044	0	+	15749919	15749919	8553170	2	246,264,	0,12861,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	15749969	15784535	chrX:15749969-15784535	1	+	15750023	15782664	789624	8	196,198,119,96,63,156,1027,350,	0,14608,22526,24332,25276,26744,32515,34216,
#Partially deleted in new
chrX	15764595	15768864	chrX:15764595-15768864	0	+	15764595	15766943	789624	3	180,115,222,	0,2316,4047,
#Partially deleted in new
chrX	15774268	15775631	chrX:15774268-15775631	0	+	15774268	15774268	8553170	2	129,386,	0,977,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	15785715	15787589	chrX:15785715-15787589	3	-	15785715	15785715	789624	1	1874,	0,
#Partially deleted in new
chrX	15790471	15823260	chrX:15790471-15823260	3	+	15790495	15823242	789624	11	65,80,82,109,87,39,119,214,56,110,530,	0,462,9400,13216,13639,17761,18728,25205,28115,29735,32259,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	15790471	15801790	chrX:15790471-15801790	1	+	15790495	15801514	789624	4	65,80,82,517,	0,462,9400,10802,
#Partially deleted in new
chrX	15790511	15803796	chrX:15790511-15803796	0	+	15790511	15790511	8553170	4	25,149,82,109,	0,353,9360,13176,
#Partially deleted in new
chrX	15825805	15854931	chrX:15825805-15854931	3	-	15827324	15852524	789624	5	1567,138,109,179,244,	0,19573,20097,26540,28882,
#Partially deleted in new
chrX	15826891	15852513	chrX:15826891-15852513	0	-	15840546	15852513	789624	5	481,95,138,109,168,	0,13605,18487,19011,25454,
#Partially deleted in new
chrX	15827324	15854780	chrX:15827324-15854780	1	-	15827324	15852524	789624	6	48,9,138,109,179,93,	0,867,18054,18578,25021,27363,
#Partially deleted in new
chrX	15830058	15854804	chrX:15830058-15854804	1	-	15832950	15852524	789624	5	2949,138,109,179,117,	0,15320,15844,22287,24629,
#Partially deleted in new
chrX	15831105	15845516	chrX:15831105-15845516	0	-	15831105	15831105	8553170	3	463,81,138,	0,2338,14273,
#Partially deleted in new
chrX	15831442	15852502	chrX:15831442-15852502	0	-	15831532	15852502	789624	4	126,138,109,157,	0,13936,14460,20903,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	15916188	15916303	chrX:15916188-15916303	3	-	15916188	15916188	8553170	1	115,	0,
#Partially deleted in new
chrX	15917547	15918631	chrX:15917547-15918631	7	+	15917547	15917547	16724991	2	294,43,	0,1041,
#Partially deleted in new
chrX	16123555	16153021	chrX:16123555-16153021	3	+	16123953	16152645	789624	3	811,352,766,	0,26749,28700,
#Partially deleted in new
chrX	16152940	16157829	chrX:16152940-16157829	0	-	16152940	16152940	8553170	4	162,70,83,77,	0,453,1657,4812,
#Partially deleted in new
chrX	16153219	16170869	chrX:16153219-16170869	3	-	16153219	16153219	8553170	6	244,83,107,136,213,254,	0,1378,4533,13987,15461,17396,
#Partially deleted in new
chrX	16153219	16159672	chrX:16153219-16159672	0	-	16153219	16153219	8553170	4	244,83,107,20,	0,1378,4533,6433,
#Partially deleted in new
chrX	16167480	16171464	chrX:16167480-16171464	3	+	16170382	16171393	789624	2	303,1131,	0,2853,
#Partially deleted in new
chrX	16167712	16171464	chrX:16167712-16171464	1	+	16170382	16171393	789624	3	71,177,1131,	0,1019,2621,
#Partially deleted in new
chrX	16198427	16199289	chrX:16198427-16199289	7	-	16198427	16198427	16724991	1	862,	0,
#Deleted in new
chrX	16474341	16475340	chrX:16474341-16475340	7	-	16474341	16474341	16724991	1	999,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	16539136	16539439	chrX:16539136-16539439	3	-	16539136	16539136	8553170	1	303,	0,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chrX	16588002	16712217	chrX:16588002-16712217	1	-	16590792	16702902	0	19	1773,111,145,97,56,97,44,63,95,89,133,152,81,84,117,101,171,205,705,	0,2749,21538,29147,32274,51144,79511,79659,82577,90359,95091,101447,103537,105138,105368,110233,110920,114734,123510,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chrX	16588305	16712652	chrX:16588305-16712652	1	-	16590792	16702902	0	19	1470,111,145,97,56,97,44,63,95,89,133,152,81,84,117,101,171,205,318,	0,2446,21235,28844,31971,50841,79208,79356,82274,90056,94788,101144,103234,104835,105065,109930,110617,114431,124029,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chrX	16588305	16712936	chrX:16588305-16712936	3	-	16590792	16702902	0	19	1470,111,145,97,56,97,44,63,95,89,133,152,81,84,117,101,171,205,215,	0,2446,21235,28844,31971,50841,79208,79356,82274,90056,94788,101144,103234,104835,105065,109930,110617,114431,124416,
#Partially deleted in new
chrX	16589548	16591045	chrX:16589548-16591045	0	-	16589548	16589548	8553170	2	227,294,	0,1203,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	16627011	16627085	chrX:16627011-16627085	3	-	16627011	16627011	5263520	1	74,	0,
#Partially deleted in new
chrX	16638486	16670633	chrX:16638486-16670633	0	-	16638821	16670633	789624	5	475,97,44,63,54,	0,660,29027,29175,32093,
#Partially deleted in new
chrX	16650157	16654670	chrX:16650157-16654670	3	+	16651006	16654509	789624	3	46,143,266,	0,841,4247,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	16719631	16765336	chrX:16719631-16765336	3	+	16719724	16760359	0	9	268,119,67,74,140,149,59,148,5105,	0,15595,16534,22084,24069,35313,37031,37530,40600,
#Partially deleted in new
chrX	16719770	16736521	chrX:16719770-16736521	0	+	16719770	16719770	8553170	3	129,119,356,	0,15456,16395,
#Partially deleted in new
chrX	16767843	16767905	chrX:16767843-16767905	3	+	16767843	16767843	8553170	1	62,	0,
#Partially deleted in new
chrX	16786426	16844519	chrX:16786426-16844519	3	+	16786487	16841766	789624	10	163,304,92,171,195,120,75,93,96,3092,	0,32147,33737,41667,43149,46196,47856,51166,53394,55001,
#Partially deleted in new
chrX	16786431	16844517	chrX:16786431-16844517	1	+	16786487	16841766	789624	8	158,171,195,120,75,93,96,3090,	0,41662,43144,46191,47851,51161,53389,54996,
#Deleted in new
chrX	16803232	16803353	chrX:16803232-16803353	7	+	16803232	16803232	16724991	1	121,	0,
#Partially deleted in new
chrX	16839282	16852065	chrX:16839282-16852065	0	-	16845034	16852065	789624	5	108,76,111,58,20,	0,5745,6545,9961,12763,
#Partially deleted in new
chrX	16839836	16844519	chrX:16839836-16844519	0	+	16839836	16839836	8553170	2	139,3092,	0,1591,
#Partially deleted in new
chrX	16844340	16870414	chrX:16844340-16870414	3	-	16845034	16870053	0	12	763,111,58,77,78,127,161,116,174,146,145,377,	0,1487,4903,7705,8210,8408,9341,13253,14335,18614,24735,25697,
#Partially deleted in new
chrX	16844649	16852280	chrX:16844649-16852280	0	-	16844649	16844649	8553170	4	454,111,58,235,	0,1178,4594,7396,
#Partially deleted in new
chrX	16844653	16869886	chrX:16844653-16869886	1	-	16845034	16869641	0	12	450,111,58,77,78,127,161,116,174,146,145,393,	0,1174,4590,7392,7897,8095,9028,12940,14022,18301,24422,24840,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	16844653	16852152	chrX:16844653-16852152	0	-	16844653	16844653	8553170	3	450,3474,107,	0,1174,7392,
#Partially deleted in new
chrX	16844689	16870361	chrX:16844689-16870361	1	-	16845034	16870053	789624	12	414,111,58,77,78,127,161,116,147,146,145,324,	0,1138,4554,7356,7861,8059,8992,12904,13986,18265,24386,25348,
#Partially deleted in new
chrX	16845870	16852970	chrX:16845870-16852970	0	-	16845870	16845870	8553170	5	68,58,77,78,222,	0,3373,6175,6680,6878,
#Partially deleted in new
chrX	16848990	16857602	chrX:16848990-16857602	0	-	16849225	16857602	789624	6	311,77,78,127,161,9,	0,3055,3560,3758,4691,8603,
#Partially deleted in new
chrX	16852045	16863021	chrX:16852045-16863021	0	-	16852045	16863021	789624	7	77,135,127,161,116,174,67,	0,370,703,1636,5548,6630,10909,
#Partially deleted in new
chrX	16852551	16858803	chrX:16852551-16858803	0	-	16852551	16852551	8553170	3	1291,116,128,	0,5042,6124,
#Partially deleted in new
chrX	16862956	16870344	chrX:16862956-16870344	0	-	16862956	16869134	789624	3	144,179,307,	0,6119,7081,
#Deleted in new
chrX	16869115	16870153	chrX:16869115-16870153	0	-	16869115	16870053	789624	2	105,107,	0,931,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	16875145	16875267	chrX:16875145-16875267	3	-	16875145	16875145	8553170	1	122,	0,
#Deleted in new
chrX	16897650	16898521	chrX:16897650-16898521	7	-	16897650	16897650	16724991	1	871,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	16912214	16912317	chrX:16912214-16912317	3	-	16912214	16912214	8553170	1	103,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chrX	16946690	17153280	chrX:16946690-17153280	3	+	16946861	17147481	0	18	444,124,149,127,98,136,64,143,95,70,54,46,137,62,84,146,106,5868,	0,59530,75432,78368,82835,100656,105691,108117,115747,121711,123249,127423,130580,157027,187133,188570,192165,200722,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chrX	16946861	17153272	chrX:16946861-17153272	1	+	16946861	17147481	0	18	273,124,149,124,98,136,64,143,95,70,54,46,137,62,84,146,106,5860,	0,59359,75261,78200,82664,100485,105520,107946,115576,121540,123078,127252,130409,156856,186962,188399,191994,200551,
#Partially deleted in new
chrX	16947069	17022371	chrX:16947069-17022371	0	+	16947069	16947069	8553170	3	65,124,249,	0,59151,75053,
#Deleted in new
chrX	17044379	17044511	chrX:17044379-17044511	3	-	17044379	17044379	8553170	1	132,	0,
#Partially deleted in new
chrX	17074512	17147629	chrX:17074512-17147629	0	+	17074512	17074512	8553170	6	96,62,84,146,106,217,	0,29205,59311,60748,64343,72900,
#Deleted in new
chrX	17099781	17100239	chrX:17099781-17100239	7	-	17099781	17099781	16724991	1	458,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	17135693	17147628	chrX:17135693-17147628	0	+	17135693	17135693	8553170	2	3268,216,	0,11719,
#Partially deleted in new
chrX	17282636	17283093	chrX:17282636-17283093	7	+	17282636	17282636	16724991	1	457,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	17357929	17358033	chrX:17357929-17358033	3	+	17357929	17357929	8553170	1	104,	0,
#Partially deleted in new
chrX	17375419	17735994	chrX:17375419-17735994	3	+	17375757	17732464	789624	8	903,153,134,193,132,2982,127,4137,	0,312322,316915,346021,348879,349927,353229,356438,
#Deleted in new
chrX	17425880	17425954	chrX:17425880-17425954	3	+	17425880	17425880	5263520	1	74,	0,
#Partially deleted in new
chrX	17528434	17587160	chrX:17528434-17587160	3	+	17528434	17528434	789624	2	324,1230,	0,57496,
#Partially deleted in new
chrX	17552348	17557387	chrX:17552348-17557387	3	-	17552348	17552348	789624	2	176,190,	0,4849,
#Partially deleted in new
chrX	17635292	17735978	chrX:17635292-17735978	1	+	17635566	17732464	789624	9	308,153,134,63,193,132,2982,127,4121,	0,52449,57042,84051,86148,89006,90054,93356,96565,
#Partially deleted in new
chrX	17635292	17735991	chrX:17635292-17735991	1	+	17635584	17732464	789624	8	308,153,134,193,132,2982,127,4134,	0,52449,57042,86148,89006,90054,93356,96565,
#Partially deleted in new
chrX	17656138	17687894	chrX:17656138-17687894	0	+	17656138	17687894	8553170	2	226,153,	0,31603,
#Partially deleted in new
chrX	17686781	17735978	chrX:17686781-17735978	1	+	17687711	17732464	789624	9	951,157,134,63,193,132,2982,127,4121,	0,956,5553,32562,34659,37517,38565,41867,45076,
#Deleted in new
chrX	17705338	17705691	chrX:17705338-17705691	7	-	17705338	17705338	16724991	1	353,	0,
#Deleted in new
chrX	17719262	17724370	chrX:17719262-17724370	0	+	17719262	17719262	8553170	3	144,193,72,	0,2178,5036,
#Partially deleted in new
chrX	17737448	17754988	chrX:17737448-17754988	1	+	17749953	17753392	789624	6	232,84,105,400,152,1731,	0,8566,11951,12445,14366,15809,
#Partially deleted in new
chrX	17737467	17754985	chrX:17737467-17754985	1	+	17749953	17753392	789624	6	213,81,105,400,152,1728,	0,8550,11932,12426,14347,15790,
#Partially deleted in new
chrX	17737468	17754071	chrX:17737468-17754071	1	+	17744186	17753392	789624	8	212,149,84,81,105,400,152,814,	0,6602,7987,8549,11931,12425,14346,15789,
#Partially deleted in new
chrX	17737468	17754985	chrX:17737468-17754985	3	+	17744186	17753392	789624	7	212,149,84,105,400,152,1728,	0,6602,8546,11931,12425,14346,15789,
#Partially deleted in new
chrX	17737550	17749950	chrX:17737550-17749950	0	+	17737550	17737550	8553170	4	130,84,81,551,	0,7905,8467,11849,
#Partially deleted in new
chrX	17737724	17750114	chrX:17737724-17750114	0	+	17744186	17750114	789624	5	258,149,84,105,221,	0,6346,8290,11675,12169,
#Partially deleted in new
chrX	17743868	17754985	chrX:17743868-17754985	0	+	17743868	17743868	8553170	5	2230,105,400,152,1728,	0,5531,6025,7946,9389,
#Deleted in new
chrX	17769004	17769398	chrX:17769004-17769398	7	-	17769004	17769004	16724991	1	394,	0,
#Partially deleted in new
chrX	17800048	17861298	chrX:17800048-17861298	1	-	17800417	17802010	789624	3	1677,159,201,	0,1827,61049,
#Partially deleted in new
chrX	17800050	17861236	chrX:17800050-17861236	1	-	17800417	17802010	789624	3	1984,194,139,	0,37486,61047,
#Partially deleted in new
chrX	17800050	17860707	chrX:17800050-17860707	1	-	17800417	17802010	789624	3	1984,194,199,	0,37486,60458,
#Partially deleted in new
chrX	17800050	17861337	chrX:17800050-17861337	1	-	17800417	17802010	789624	2	1984,240,	0,61047,
#Partially deleted in new
chrX	17800050	17861337	chrX:17800050-17861337	3	-	17800417	17802010	789624	3	1984,197,240,	0,37486,61047,
#Partially deleted in new
chrX	17801663	17837730	chrX:17801663-17837730	0	-	17801663	17802010	789624	3	110,159,194,	0,212,35873,
#Deleted in new
chrX	17897710	17900333	chrX:17897710-17900333	7	-	17897710	17897710	16724991	1	2623,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	17933348	17934823	chrX:17933348-17934823	7	+	17933348	17933348	16724991	1	1475,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	17970196	18104644	chrX:17970196-18104644	3	-	17970196	17970196	789624	5	234,169,111,100,94,	0,1790,12294,25592,134354,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chrX	18162930	18220883	chrX:18162930-18220883	3	-	18165008	18220750	789624	14	2293,204,229,122,201,141,108,147,126,415,116,138,213,158,	0,8070,11099,13041,14638,17579,28070,32365,38884,40570,49634,50843,53590,57795,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	18170974	18220750	chrX:18170974-18220750	1	-	18170974	18220750	789624	11	230,229,122,201,141,108,415,116,138,213,25,	0,3055,4997,6594,9535,20026,32526,41590,42799,45546,49751,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chrX	18239313	18354727	chrX:18239313-18354727	3	-	18241250	18334071	0	15	2066,152,252,114,183,204,121,218,244,89,235,71,69,46,136,	0,3125,7263,8455,17534,18730,20857,26271,65658,81018,84545,85593,91273,94736,115278,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	18239313	18247885	chrX:18239313-18247885	0	-	18241371	18247885	789624	3	2066,252,117,	0,7263,8455,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	18239317	18246755	chrX:18239317-18246755	1	-	18241250	18246712	0	4	636,367,152,179,	0,1695,3121,7259,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	18239384	18241225	chrX:18239384-18241225	0	-	18239384	18239384	8553170	2	594,213,	0,1628,
#Deleted in new
chrX	18341215	18341346	chrX:18341215-18341346	7	+	18341215	18341215	16724991	1	131,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	18395993	18396095	chrX:18395993-18396095	3	-	18395993	18395993	8553170	1	102,	0,
#Partially deleted in new
chrX	18425582	18653625	chrX:18425582-18653625	1	+	18507096	18653544	0	21	113,226,35,46,137,121,60,91,190,81,152,967,102,106,124,100,120,217,84,183,194,	0,81352,85237,138894,149771,154265,156308,158680,162371,169765,172879,178319,183228,183882,187569,194284,199545,202788,220424,224827,227849,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chrX	18426197	18627734	chrX:18426197-18627734	1	+	18507096	18626923	789624	18	204,226,35,46,137,121,60,91,190,81,152,967,102,106,124,100,120,961,	0,80737,84622,138279,149156,153650,155693,158065,161756,169150,172264,177704,182613,183267,186954,193669,198930,200576,
#Partially deleted in new
chrX	18426712	18604337	chrX:18426712-18604337	0	+	18507096	18604337	789624	12	207,226,35,46,137,121,60,91,190,81,152,436,	0,80222,84107,137764,148641,153135,155178,157550,161241,168635,171749,177189,
#Partially deleted in new
chrX	18442187	18653629	chrX:18442187-18653629	3	+	18507096	18653544	0	22	74,49,226,35,46,137,121,60,91,190,81,152,967,102,106,124,100,120,217,84,183,198,	0,187,64747,68632,122289,133166,137660,139703,142075,145766,153160,156274,161714,166623,167277,170964,177679,182940,186183,203819,208222,211244,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	18442212	18507149	chrX:18442212-18507149	0	+	18507096	18507149	789624	3	211,141,215,	0,1606,64722,
#Partially deleted in new
chrX	18442223	18575390	chrX:18442223-18575390	0	+	18507096	18575390	789624	7	38,49,52,226,35,46,37,	0,151,15259,64711,68596,122253,133130,
#Partially deleted in new
chrX	18442227	18575414	chrX:18442227-18575414	0	+	18507096	18575414	789624	5	196,226,35,46,61,	0,64707,68592,122249,133126,
#Partially deleted in new
chrX	18442274	18619944	chrX:18442274-18619944	0	+	18507096	18619944	789624	16	116,226,35,46,137,121,60,91,190,81,152,967,102,106,124,78,	0,64660,68545,122202,133079,137573,139616,141988,145679,153073,156187,161627,166536,167190,170877,177592,
#Partially deleted in new
chrX	18497317	18506973	chrX:18497317-18506973	0	+	18497317	18497317	8553170	2	61,39,	0,9617,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chrX	18507096	18638407	chrX:18507096-18638407	1	+	18507096	18628757	0	17	64,35,46,137,121,60,91,190,81,152,967,102,106,124,100,120,10037,	0,3723,57380,68257,72751,74794,77166,80857,88251,91365,96805,101714,102368,106055,112770,118031,121274,
#Deleted in new
chrX	18535078	18536120	chrX:18535078-18536120	7	+	18535078	18535078	16724991	1	1042,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	18587685	18589815	chrX:18587685-18589815	0	+	18587685	18587685	8553170	1	2130,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	18639909	18672109	chrX:18639909-18672109	3	-	18642003	18672068	0	6	2247,196,142,106,26,93,	0,4520,7281,16743,17730,32107,
#Partially deleted in new
chrX	18641923	18650537	chrX:18641923-18650537	0	-	18641923	18641923	8553170	5	233,196,142,203,472,	0,2506,5267,5527,8142,
#Partially deleted in new
chrX	18675908	18697909	chrX:18675908-18697909	0	+	18675908	18675908	8553170	4	222,94,180,65,	0,10229,15006,21936,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	18688642	18691604	chrX:18688642-18691604	3	-	18688642	18688642	8553170	2	263,167,	0,2795,
#Partially deleted in new
chrX	18690912	18827921	chrX:18690912-18827921	3	+	18707780	18827487	789624	19	182,87,103,168,128,61,161,115,47,167,37,150,153,186,143,107,164,85,646,	0,6932,9420,16746,39268,42835,58879,66714,70617,88097,91453,92986,98208,112979,115490,127126,133010,134838,136363,
#Partially deleted in new
chrX	18690925	18827917	chrX:18690925-18827917	1	+	18707780	18827487	789624	18	169,87,103,168,128,61,161,115,47,167,37,150,153,143,107,164,85,642,	0,6919,9407,16733,39255,42822,58866,66701,70604,88084,91440,92973,98195,115477,127113,132997,134825,136350,
#Partially deleted in new
chrX	18700050	18749952	chrX:18700050-18749952	0	+	18700050	18700050	8553170	5	385,168,128,61,161,	0,7608,30130,33697,49741,
#Partially deleted in new
chrX	18700050	18749955	chrX:18700050-18749955	0	+	18700050	18700050	8553170	5	385,168,128,61,164,	0,7608,30130,33697,49741,
#Partially deleted in new
chrX	18707653	18761576	chrX:18707653-18761576	0	+	18749826	18761576	789624	5	173,61,161,115,47,	0,26094,42138,49973,53876,
#Partially deleted in new
chrX	18707657	18789200	chrX:18707657-18789200	0	+	18757686	18789200	789624	7	169,115,47,167,37,150,80,	0,49969,53872,71352,74708,76241,81463,
#Partially deleted in new
chrX	18730163	18827660	chrX:18730163-18827660	0	+	18730163	18730163	8553170	15	145,61,161,115,47,167,37,150,153,186,143,107,164,85,385,	0,3584,19628,27463,31366,48846,52202,53735,58957,73728,76239,87875,93759,95587,97112,
#Partially deleted in new
chrX	18818094	18827547	chrX:18818094-18827547	0	+	18818094	18827487	789624	3	51,85,272,	0,7656,9181,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	18838708	18839452	chrX:18838708-18839452	7	-	18838708	18838708	16724991	1	744,	0,
#Partially deleted in new
chrX	18865770	18866554	chrX:18865770-18866554	7	+	18865770	18865770	16724991	1	784,	0,
#Deleted in new
chrX	18890295	18894335	chrX:18890295-18894335	3	+	18890295	18890295	789624	3	333,134,189,	0,2909,3851,
#Partially deleted in new
chrX	18892299	18984598	chrX:18892299-18984598	3	-	18893484	18983932	789624	33	1356,201,54,171,54,30,119,102,130,79,80,157,134,89,174,170,79,145,110,135,79,108,96,123,54,147,99,81,83,169,48,159,744,	0,1904,2838,4863,6873,8370,9185,13458,14195,14436,14718,15600,16501,18572,26381,27732,31756,32081,33368,34153,36928,39341,43755,46327,47695,49229,51410,52778,56444,58804,60194,61954,91555,
#Deleted in new
chrX	18892743	18894497	chrX:18892743-18894497	1	+	18892743	18892743	8553170	3	112,134,351,	0,461,1403,
#Deleted in new
chrX	18892971	18896634	chrX:18892971-18896634	0	-	18892971	18892971	8553170	2	684,2431,	0,1232,
#Partially deleted in new
chrX	18892972	18898169	chrX:18892972-18898169	0	-	18892972	18892972	8553170	4	683,201,54,1007,	0,1231,2165,4190,
#Deleted in new
chrX	18893447	18895242	chrX:18893447-18895242	0	-	18893447	18893447	8553170	3	208,201,105,	0,756,1690,
#Partially deleted in new
chrX	18894081	18901603	chrX:18894081-18901603	0	-	18894081	18894081	8553170	6	323,54,171,54,30,119,	0,1056,3081,5091,6588,7403,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	18895145	18906802	chrX:18895145-18906802	0	-	18895145	18895145	8553170	7	46,171,119,93,102,130,67,	0,2017,6339,7672,10612,11349,11590,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	18900678	18905815	chrX:18900678-18905815	0	-	18900678	18900678	8553170	4	21,119,119,58,	0,806,2113,5079,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	18915242	18915535	chrX:18915242-18915535	3	-	18915242	18915242	8553170	1	293,	0,
#Deleted in new
chrX	18924163	18926480	chrX:18924163-18926480	0	-	18924163	18924163	8553170	3	362,110,28,	0,1504,2289,
#Partially deleted in new
chrX	18989308	19122637	chrX:18989308-19122637	3	-	18990863	19068834	789624	25	1740,153,102,284,100,269,122,104,46,157,166,389,67,95,38,40,56,56,54,36,24,36,119,45,196,	0,5587,6742,9687,10552,13537,15449,16693,16911,20317,21304,24377,30290,31795,34107,34600,37910,38874,41675,46633,48158,50880,79408,93393,133133,
#Partially deleted in new
chrX	18989308	19122637	chrX:18989308-19122637	1	-	18990863	19068834	789624	28	1740,102,284,100,269,122,104,46,123,144,157,166,389,67,95,38,40,56,56,54,42,36,24,48,36,119,45,196,	0,6742,9687,10552,13537,15449,16693,16911,17926,18671,20317,21304,24377,30290,31795,34107,34600,37910,38874,41675,44304,46633,48158,48280,50880,79408,93393,133133,
#Partially deleted in new
chrX	18989308	19122637	chrX:18989308-19122637	1	-	18990863	19068834	789624	27	1740,153,102,284,100,269,122,104,46,123,144,157,166,389,67,95,38,40,56,56,54,42,36,36,119,45,196,	0,5587,6742,9687,10552,13537,15449,16693,16911,17926,18671,20317,21304,24377,30290,31795,34107,34600,37910,38874,41675,44304,46633,50880,79408,93393,133133,
#Partially deleted in new
chrX	18989308	19122637	chrX:18989308-19122637	1	-	18990863	19068834	789624	28	1740,153,102,284,100,269,122,104,46,123,144,157,166,389,67,95,38,40,56,56,54,42,36,24,36,119,45,196,	0,5587,6742,9687,10552,13537,15449,16693,16911,17926,18671,20317,21304,24377,30290,31795,34107,34600,37910,38874,41675,44304,46633,48158,50880,79408,93393,133133,
#Partially deleted in new
chrX	18989313	19122559	chrX:18989313-19122559	1	-	18990863	19068834	789624	27	1735,153,102,284,100,269,122,104,46,123,144,157,166,389,67,95,38,40,56,56,54,36,24,36,119,45,118,	0,5582,6737,9682,10547,13532,15444,16688,16906,17921,18666,20312,21299,24372,30285,31790,34102,34595,37905,38869,41670,46628,48153,50875,79403,93388,133128,
#Partially deleted in new
chrX	18989313	19122461	chrX:18989313-19122461	1	-	18990863	19068834	789624	29	1735,153,102,284,100,269,122,104,46,123,144,157,166,389,67,95,38,40,56,56,54,42,36,24,39,36,119,45,20,	0,5582,6737,9682,10547,13532,15444,16688,16906,17921,18666,20312,21299,24372,30285,31790,34102,34595,37905,38869,41670,44299,46628,48153,48284,50875,79403,93388,133128,
#Partially deleted in new
chrX	18989313	19122559	chrX:18989313-19122559	1	-	18990863	19068834	789624	27	1735,153,102,284,100,269,122,104,46,123,144,157,166,389,67,95,38,40,56,56,54,36,48,36,119,45,118,	0,5582,6737,9682,10547,13532,15444,16688,16906,17921,18666,20312,21299,24372,30285,31790,34102,34595,37905,38869,41670,46628,48275,50875,79403,93388,133128,
#Partially deleted in new
chrX	18989313	19122559	chrX:18989313-19122559	1	-	18990863	19068834	789624	29	1735,153,102,284,100,269,122,104,46,123,144,157,166,389,67,95,38,40,56,56,54,42,36,24,48,36,119,45,118,	0,5582,6737,9682,10547,13532,15444,16688,16906,17921,18666,20312,21299,24372,30285,31790,34102,34595,37905,38869,41670,44299,46628,48153,48275,50875,79403,93388,133128,
#Partially deleted in new
chrX	18989314	19122464	chrX:18989314-19122464	1	-	18990863	19068834	789624	28	1734,153,102,284,100,269,122,104,46,123,144,157,166,389,67,95,38,40,56,56,54,36,24,48,36,119,45,23,	0,5581,6736,9681,10546,13531,15443,16687,16905,17920,18665,20311,21298,24371,30284,31789,34101,34594,37904,38868,41669,46627,48152,48274,50874,79402,93387,133127,
#Partially deleted in new
chrX	18990009	19082743	chrX:18990009-19082743	1	-	18990863	19068834	789624	24	1039,153,102,284,100,269,122,104,46,157,166,389,67,95,38,40,56,56,54,36,24,36,119,42,	0,4886,6041,8986,9851,12836,14748,15992,16210,19616,20603,23676,29589,31094,33406,33899,37209,38173,40974,45932,47457,50179,78707,92692,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	19019567	19036388	chrX:19019567-19036388	0	-	19019567	19019567	8553170	7	98,95,38,40,56,56,5405,	0,1536,3848,4341,7651,8615,11416,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	19343892	19361705	chrX:19343892-19361705	1	+	19344037	19359653	0	12	202,114,60,174,127,92,93,156,72,68,109,2217,	0,2617,5419,6044,7388,9189,10598,11456,11793,13759,15023,15596,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	19343892	19361705	chrX:19343892-19361705	1	+	19344037	19359653	0	10	202,60,174,127,92,156,72,68,109,2217,	0,5419,6044,7388,9189,11456,11793,13759,15023,15596,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	19343892	19361705	chrX:19343892-19361705	3	+	19344037	19359653	0	11	202,60,174,148,92,93,156,72,68,109,2217,	0,5419,6044,7367,9189,10598,11456,11793,13759,15023,15596,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	19343921	19353164	chrX:19343921-19353164	0	+	19344037	19353164	789624	6	173,114,60,174,127,83,	0,2588,5390,6015,7359,9160,
#Partially deleted in new
chrX	19343929	19350098	chrX:19343929-19350098	0	+	19344037	19350098	789624	4	165,84,60,162,	0,1806,5382,6007,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	19343932	19361685	chrX:19343932-19361685	1	+	19344037	19359653	0	11	162,60,174,127,92,93,156,72,68,109,2197,	0,5379,6004,7348,9149,10558,11416,11753,13719,14983,15556,
#Partially deleted in new
chrX	19343935	19351498	chrX:19343935-19351498	0	+	19343935	19343935	8553170	4	159,60,174,218,	0,5376,6001,7345,
#Partially deleted in new
chrX	19343949	19354570	chrX:19343949-19354570	0	+	19344037	19354570	789624	6	145,60,174,148,92,80,	0,5362,5987,7310,9132,10541,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	19343967	19353327	chrX:19343967-19353327	1	+	19344037	19353206	789624	5	127,60,174,127,246,	0,5344,5969,7313,9114,
#Partially deleted in new
chrX	19352828	19355445	chrX:19352828-19355445	0	+	19352828	19352828	8553170	3	345,93,97,	0,1662,2520,
#Partially deleted in new
chrX	19355317	19359025	chrX:19355317-19359025	0	+	19355317	19355317	8553170	4	187,72,68,110,	0,368,2334,3598,
#Partially deleted in new
chrX	19355581	19359844	chrX:19355581-19359844	1	+	19357663	19359653	789624	4	176,68,109,356,	0,2070,3334,3907,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	19357381	19359832	chrX:19357381-19359832	0	+	19357381	19357381	8553170	3	338,109,344,	0,1534,2107,
#Boundary problem: need 30, got 0, diff 30, mapped 0.0
chrX	19360055	19482276	chrX:19360055-19482276	0	-	19360055	19360055	8553170	30	778,77,101,113,166,106,186,175,160,184,158,106,131,128,134,88,96,98,50,108,73,151,160,113,171,107,169,194,33,383,	0,1283,1437,2682,8998,10903,11289,12597,13480,14421,20064,31946,32287,35025,38170,40520,47132,48472,49868,53301,54204,55051,65475,66175,71382,96857,99929,104157,106610,121838,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chrX	19360057	19460127	chrX:19360057-19460127	0	-	19414326	19460127	789624	26	776,77,101,113,166,106,186,175,160,184,158,106,131,128,134,88,96,50,108,73,151,160,113,171,107,143,	0,1281,1435,2680,8996,10901,11287,12595,13478,14419,20062,31944,32285,35023,38168,40518,47130,49866,53299,54202,55049,65473,66173,71380,96855,99927,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	19360059	19373178	chrX:19360059-19373178	0	-	19360059	19360059	8553170	8	774,77,101,113,166,106,186,526,	0,1279,1433,2678,8994,10899,11285,12593,
#Partially deleted in new
chrX	19360678	19515261	chrX:19360678-19515261	3	-	19360748	19515261	789624	29	155,77,101,113,166,106,186,175,160,184,158,106,131,128,134,88,96,50,108,151,160,113,171,107,169,194,24,140,361,	0,660,814,2059,8375,10280,10666,11974,12857,13798,19441,31323,31664,34402,37547,39897,46509,49245,52678,54428,64852,65552,70759,96234,99306,103534,125803,128149,154222,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	19376773	19376875	chrX:19376773-19376875	3	+	19376773	19376773	8553170	1	102,	0,
#Partially deleted in new
chrX	19496377	19497721	chrX:19496377-19497721	7	-	19496377	19496377	16724991	2	785,250,	0,1094,
#Partially deleted in new
chrX	19533974	19887601	chrX:19533974-19887601	3	-	19536416	19887310	0	18	2484,64,269,129,110,86,160,81,52,108,95,76,206,130,104,124,158,295,	0,3742,7950,11947,15999,35128,54668,58092,60974,73963,97889,111425,149848,161637,172906,212343,302150,353332,
#Partially deleted in new
chrX	19534006	19670998	chrX:19534006-19670998	1	-	19536416	19670873	0	13	2452,64,269,129,110,86,160,81,52,108,95,76,137,	0,3710,7918,11915,15967,35096,54636,58060,60942,73931,97857,111393,136855,
#Partially deleted in new
chrX	19535692	19799751	chrX:19535692-19799751	1	-	19536416	19799684	0	17	766,64,269,129,110,86,160,81,52,108,95,76,206,130,104,124,118,	0,2024,6232,10229,14281,33410,52950,56374,59256,72245,96171,109707,148130,159919,171188,210625,263941,
#Partially deleted in new
chrX	19536413	19746411	chrX:19536413-19746411	0	-	19536416	19746411	789624	18	45,64,269,129,110,86,160,81,52,108,95,76,206,75,57,130,104,94,	0,1303,5511,9508,13560,32689,52229,55653,58535,71524,95450,108986,147409,151203,158581,159198,170467,209904,
#Partially deleted in new
chrX	19588277	19887459	chrX:19588277-19887459	1	-	19588410	19887310	789624	14	525,81,52,108,95,76,206,75,57,130,104,124,158,153,	0,3789,6671,19660,43586,57122,95545,99339,106717,107334,118603,158040,247847,299029,
#Partially deleted in new
chrX	19588683	19695701	chrX:19588683-19695701	0	-	19588683	19588683	8553170	6	119,81,52,108,95,90,	0,3383,6265,19254,43180,106928,
#Partially deleted in new
chrX	19592067	19664715	chrX:19592067-19664715	0	-	19592067	19592067	8553170	7	80,52,151,108,95,76,27,	0,2881,9432,15870,39796,53332,72621,
#Partially deleted in new
chrX	19645416	19747703	chrX:19645416-19747703	0	-	19645416	19747666	789624	6	59,206,130,104,124,40,	0,38406,50195,61464,100901,102247,
#Partially deleted in new
chrX	19683823	19740837	chrX:19683823-19740837	0	-	19683823	19740768	789624	4	205,130,104,79,	0,11788,23057,56935,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	19912859	19970298	chrX:19912859-19970298	3	-	19917304	19970264	789624	11	4475,156,90,28,116,64,115,176,663,570,75,	0,16925,22949,24645,37893,40128,40918,42531,52184,53220,57364,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	19913148	19916164	chrX:19913148-19916164	0	-	19913148	19913148	8553170	4	331,275,111,520,	0,1003,1790,2496,
#Deleted in new
chrX	19914162	19915035	chrX:19914162-19915035	0	-	19914162	19914162	8553170	3	106,76,97,	0,188,776,
#Partially deleted in new
chrX	19916254	19965295	chrX:19916254-19965295	0	-	19923398	19955535	789624	10	1080,250,156,90,28,116,64,115,176,252,	0,6903,13530,19554,21250,34498,36733,37523,39136,48789,
#Partially deleted in new
chrX	19916257	19970298	chrX:19916257-19970298	1	-	19917304	19970264	789624	11	1077,156,90,115,116,64,115,176,663,570,75,	0,13527,19551,21160,34495,36730,37520,39133,48786,49822,53966,
#Partially deleted in new
chrX	19916739	19929898	chrX:19916739-19929898	0	-	19916739	19916739	8553170	3	595,28,114,	0,1332,13045,
#Partially deleted in new
chrX	19917170	19935576	chrX:19917170-19935576	0	-	19917170	19917170	8553170	3	164,156,219,	0,12614,18187,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	19928980	19965142	chrX:19928980-19965142	0	-	19930549	19965142	789624	7	1674,28,116,64,115,176,99,	0,8524,21772,24007,24797,26410,36063,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	19985057	19985159	chrX:19985057-19985159	3	-	19985057	19985057	8553170	1	102,	0,
#Partially deleted in new
chrX	20006712	20116898	chrX:20006712-20116898	3	-	20010802	20116879	789624	16	1686,276,187,79,57,105,232,133,272,128,161,111,112,164,78,149,	0,4064,5636,6341,6856,8510,9381,18238,18968,35789,37651,46165,49967,56701,58015,110037,
#Partially deleted in new
chrX	20006866	20116917	chrX:20006866-20116917	1	-	20010802	20116879	789624	17	1532,276,187,79,57,105,232,133,272,128,161,123,111,112,164,78,168,	0,3910,5482,6187,6702,8356,9227,18084,18814,35635,37497,43957,46011,49813,56547,57861,109883,
#Partially deleted in new
chrX	20008037	20116904	chrX:20008037-20116904	1	-	20010802	20116879	789624	15	361,276,187,79,57,105,232,133,272,128,137,112,164,78,155,	0,2739,4311,5016,5531,7185,8056,16913,17643,34464,36326,48642,55376,56690,108712,
#Partially deleted in new
chrX	20008338	20116632	chrX:20008338-20116632	1	-	20010802	20064803	789624	16	60,276,187,79,57,105,232,133,272,128,137,111,112,164,78,102,	0,2438,4010,4715,5230,6884,7755,16612,17342,34163,36025,44539,48341,55075,56389,108192,
#Deleted in new
chrX	20017087	20017187	chrX:20017087-20017187	3	-	20017087	20017087	5263520	1	100,	0,
#Deleted in new
chrX	20021347	20025943	chrX:20021347-20025943	0	-	20021347	20021347	8553170	3	202,133,263,	0,3603,4333,
#Partially deleted in new
chrX	20124517	20141844	chrX:20124517-20141844	3	-	20128305	20141640	0	7	3794,92,82,51,104,84,220,	0,5998,7664,9439,11220,14021,17107,
#Partially deleted in new
chrX	20128077	20141826	chrX:20128077-20141826	1	-	20128305	20141640	789624	6	234,92,82,51,104,202,	0,2438,4104,5879,7660,13547,
#Partially deleted in new
chrX	20136065	20136135	chrX:20136065-20136135	3	-	20136065	20136065	8553170	1	70,	0,
#Partially deleted in new
chrX	20136305	20136385	chrX:20136305-20136385	3	-	20136305	20136305	8553170	1	80,	0,
#Deleted in new
chrX	20139967	20140444	chrX:20139967-20140444	3	+	20139967	20139967	789624	2	268,110,	0,367,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chrX	20149910	20266882	chrX:20149910-20266882	1	-	20155397	20266632	0	22	5610,141,118,77,162,159,90,126,125,103,65,89,71,143,38,107,80,81,82,117,57,319,	0,6198,11733,13053,14988,17678,19491,22835,25253,26339,26523,27085,36385,37917,38586,43576,44278,45154,54111,59377,84847,116653,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chrX	20149910	20267033	chrX:20149910-20267033	3	-	20155397	20266632	0	22	5610,141,118,77,162,159,90,126,125,103,65,89,71,143,38,107,80,81,82,117,57,470,	0,6198,11733,13053,14988,17678,19491,22835,25253,26339,26523,27085,36385,37917,38586,43576,44278,45154,54111,59377,84847,116653,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chrX	20153661	20266606	chrX:20153661-20266606	1	-	20155397	20234799	789624	24	1859,141,118,77,162,159,90,126,125,103,65,89,71,143,38,107,80,81,82,117,57,37,94,43,	0,2447,7982,9302,11237,13927,15740,19084,21502,22588,22772,23334,32634,34166,34835,39825,40527,41403,50360,55626,81096,86907,87931,112902,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chrX	20153806	20266627	chrX:20153806-20266627	1	-	20155397	20234799	789624	25	1714,141,118,77,162,159,90,126,125,103,65,89,71,143,38,107,80,81,82,117,57,21,37,94,64,	0,2302,7837,9157,11092,13782,15595,18939,21357,22443,22627,23189,32489,34021,34690,39680,40382,41258,50215,55481,80951,81686,86762,87786,112757,
#Partially deleted in new
chrX	20154589	20267519	chrX:20154589-20267519	1	-	20155397	20234799	789624	24	931,141,118,77,162,159,90,126,125,103,65,89,71,143,38,107,80,81,82,117,57,101,94,137,	0,1519,7054,8374,10309,12999,14812,18156,20574,21660,21844,22406,31706,33238,33907,38897,39599,40475,49432,54698,80168,85979,87003,112793,
#Partially deleted in new
chrX	20154750	20266659	chrX:20154750-20266659	0	-	20155397	20234799	789624	23	770,141,118,77,162,159,90,126,125,103,65,89,71,143,38,107,80,81,82,117,57,94,96,	0,1358,6893,8213,10148,12838,14651,17995,20413,21499,21683,22245,31545,33077,33746,38736,39438,40314,49271,54537,80007,86842,111813,
#Partially deleted in new
chrX	20154786	20265617	chrX:20154786-20265617	1	-	20155397	20234799	789624	24	734,141,118,77,162,159,90,126,125,103,65,89,71,143,38,107,80,81,82,117,57,37,94,119,	0,1322,6857,8177,10112,12802,14615,17959,20377,21463,21647,22209,31509,33041,33710,38700,39402,40278,49235,54501,79971,85782,86806,110712,
#Partially deleted in new
chrX	20154795	20267094	chrX:20154795-20267094	0	-	20186361	20234799	789624	20	725,141,118,77,162,159,90,126,125,103,65,89,71,38,107,80,81,82,57,56,	0,1313,6848,8168,10103,12793,14606,17950,20368,21454,21638,22200,31500,33701,38691,39393,40269,49226,79962,112243,
#Partially deleted in new
chrX	20154834	20218959	chrX:20154834-20218959	1	-	20155397	20218838	789624	21	686,141,118,77,162,159,90,126,125,103,65,89,71,143,38,107,80,81,82,117,160,	0,1274,6809,8129,10064,12754,14567,17911,20329,21415,21599,22161,31461,32993,33662,38652,39354,40230,49187,54453,63965,
#Partially deleted in new
chrX	20154845	20234769	chrX:20154845-20234769	0	-	20188499	20234769	789624	18	675,141,118,77,162,159,90,126,125,103,65,89,71,143,38,82,117,12,	0,1263,6798,8118,10053,12743,14556,17900,20318,21404,21588,22150,31450,32982,33651,49176,54442,79912,
#Partially deleted in new
chrX	20154931	20267100	chrX:20154931-20267100	1	-	20155397	20234799	789624	22	589,141,118,77,162,159,90,126,125,103,65,89,71,143,38,107,80,81,82,117,57,62,	0,1177,6712,8032,9967,12657,14470,17814,20232,21318,21502,22064,31364,32896,33565,38555,39257,40133,49090,54356,79826,112107,
#Partially deleted in new
chrX	20154965	20267405	chrX:20154965-20267405	1	-	20155397	20234799	789624	23	555,141,118,77,162,159,90,126,125,103,65,89,71,143,38,107,80,81,82,117,57,101,367,	0,1143,6678,7998,9933,12623,14436,17780,20198,21284,21468,22030,31330,32862,33531,38521,39223,40099,49056,54322,79792,85603,112073,
#Partially deleted in new
chrX	20154977	20267089	chrX:20154977-20267089	1	-	20155397	20234799	789624	25	543,141,118,77,162,159,90,126,125,103,65,89,71,143,38,107,80,81,82,117,57,21,101,94,51,	0,1131,6666,7986,9921,12611,14424,17768,20186,21272,21456,22018,31318,32850,33519,38509,39211,40087,49044,54310,79780,80515,85591,86615,112061,
#Partially deleted in new
chrX	20155256	20267066	chrX:20155256-20267066	1	-	20155397	20234799	789624	24	264,141,118,77,162,159,90,123,125,103,65,89,71,143,38,107,80,81,82,117,57,37,94,28,	0,852,6387,7707,9642,12332,14145,17489,19907,20993,21177,21739,31039,32571,33240,38230,38932,39808,48765,54031,79501,85312,86336,111782,
#Partially deleted in new
chrX	20155440	20172864	chrX:20155440-20172864	0	-	20155440	20172864	789624	8	80,141,118,77,63,159,90,119,	0,668,6203,7523,9458,12148,13961,17305,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	20203361	20218870	chrX:20203361-20218870	0	-	20203361	20203361	8553170	3	742,117,71,	0,5926,15438,
#Partially deleted in new
chrX	20204065	20266100	chrX:20204065-20266100	0	-	20204065	20234799	789624	6	38,117,57,101,94,178,	0,5222,30692,36503,37527,61857,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	20311837	20317783	chrX:20311837-20317783	3	-	20311837	20311837	8553170	2	321,311,	0,5635,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	20443325	20492349	chrX:20443325-20492349	3	+	20443325	20443325	8553170	4	301,55,130,81,	0,458,30776,48943,
#Deleted in new
chrX	20452107	20452431	chrX:20452107-20452431	3	+	20452107	20452107	8553170	1	324,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	20769717	21082964	chrX:20769717-21082964	3	-	20769717	20769717	8553170	8	343,78,167,96,81,93,148,154,	0,179869,220172,221057,246024,246417,292255,313093,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	20874167	21374066	chrX:20874167-21374066	0	-	20874167	20874167	8553170	9	1331,78,167,96,81,93,154,79,84,	0,75419,115722,116607,141574,141967,208643,426699,499815,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	21081643	21374265	chrX:21081643-21374265	0	-	21081643	21081643	8553170	3	1321,79,169,	0,219223,292453,
#Partially deleted in new
chrX	21131495	21163726	chrX:21131495-21163726	3	+	21131495	21131495	8553170	3	101,163,444,	0,30987,31787,
#Partially deleted in new
chrX	21257883	21374119	chrX:21257883-21374119	0	-	21257883	21257883	8553170	3	2005,79,137,	0,42983,116099,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chrX	21372800	21645440	chrX:21372800-21645440	1	+	21497789	21641537	789624	19	99,164,203,88,42,120,60,69,134,212,215,49,173,74,72,68,101,547,3908,	0,53696,59811,67893,97965,117658,124986,128719,154066,159055,190437,217771,218221,222173,222523,228481,233978,236270,268732,
#Partially deleted in new
chrX	21374297	21643600	chrX:21374297-21643600	1	+	21374897	21641537	0	21	664,164,203,88,42,120,60,69,147,134,212,90,215,49,173,74,72,68,101,547,2068,	0,52199,58314,66396,96468,116161,123489,127222,142187,152569,157558,187173,188940,216274,216724,220676,221026,226984,232481,234773,267235,
#Partially deleted in new
chrX	21374356	21506742	chrX:21374356-21506742	1	+	21374897	21504798	789624	10	605,164,203,88,42,120,60,69,89,1954,	0,52140,58255,66337,96409,116102,123430,127163,128887,130432,
#Partially deleted in new
chrX	21374383	21594454	chrX:21374383-21594454	0	+	21374383	21374383	8553170	16	578,164,203,88,42,120,60,69,147,134,212,90,215,49,173,284,	0,52113,58228,66310,96382,116075,123403,127136,142101,152483,157472,187087,188854,216188,216638,219787,
#Partially deleted in new
chrX	21374417	21654695	chrX:21374417-21654695	1	+	21374897	21652521	0	21	544,164,203,88,42,120,60,69,147,134,212,215,49,173,74,72,68,101,547,197,2390,	0,52079,58194,66276,96348,116041,123369,127102,142067,152449,157438,188820,216154,216604,220556,220906,226864,232361,234653,274413,277888,
#Partially deleted in new
chrX	21374420	21642730	chrX:21374420-21642730	1	+	21374897	21641537	0	20	541,164,203,88,42,120,60,69,134,212,90,215,49,173,74,72,68,101,547,1198,	0,52076,58191,66273,96345,116038,123366,127099,152446,157435,187050,188817,216151,216601,220553,220903,226861,232358,234650,267112,
#Partially deleted in new
chrX	21374420	21506814	chrX:21374420-21506814	1	+	21374897	21503336	789624	9	541,164,203,88,42,120,60,69,3571,	0,52076,58191,66273,96345,116038,123366,127099,128823,
#Partially deleted in new
chrX	21374420	21426583	chrX:21374420-21426583	0	+	21374420	21374420	8553170	2	498,87,	0,52076,
#Partially deleted in new
chrX	21374421	21493229	chrX:21374421-21493229	0	+	21374421	21374421	8553170	6	540,164,203,88,42,2771,	0,52075,58190,66272,96344,116037,
#Partially deleted in new
chrX	21374447	21609568	chrX:21374447-21609568	0	+	21374897	21608039	789624	20	514,164,203,88,42,120,60,69,134,212,90,215,49,173,74,72,68,101,137,498,	0,52049,58164,66246,96318,116011,123339,127072,152419,157408,187023,188790,216124,216574,220526,220876,226834,232331,233547,234623,
#Partially deleted in new
chrX	21374455	21642732	chrX:21374455-21642732	1	+	21374897	21641537	789624	20	506,164,203,88,42,120,60,69,147,134,212,215,49,173,74,72,68,101,547,1200,	0,52041,58156,66238,96310,116003,123331,127064,142029,152411,157400,188782,216116,216566,220518,220868,226826,232323,234615,267077,
#Partially deleted in new
chrX	21374467	21654263	chrX:21374467-21654263	1	+	21374897	21652521	789624	20	494,164,203,88,42,120,60,69,134,212,215,49,173,74,72,68,101,547,197,1958,	0,52029,58144,66226,96298,115991,123319,127052,152399,157388,188770,216104,216554,220506,220856,226814,232311,234603,274363,277838,
#Partially deleted in new
chrX	21374467	21441405	chrX:21374467-21441405	0	+	21374467	21374467	8553170	4	494,164,203,712,	0,52029,58144,66226,
#Partially deleted in new
chrX	21374510	21654550	chrX:21374510-21654550	1	+	21374897	21652521	789624	21	451,164,203,88,42,120,60,69,134,212,90,215,49,173,74,72,68,101,547,197,2245,	0,51986,58101,66183,96255,115948,123276,127009,152356,157345,186960,188727,216061,216511,220463,220813,226771,232268,234560,274320,277795,
#Partially deleted in new
chrX	21374607	21654245	chrX:21374607-21654245	1	+	21374897	21652521	789624	22	354,164,203,88,42,120,60,69,134,212,90,215,49,72,173,74,72,68,101,547,197,1940,	0,51889,58004,66086,96158,115851,123179,126912,152259,157248,186863,188630,215964,216107,216414,220366,220716,226674,232171,234463,274223,277698,
#Partially deleted in new
chrX	21374609	21642657	chrX:21374609-21642657	1	+	21374897	21641537	789624	17	352,164,203,88,42,120,60,69,147,49,173,74,72,68,101,547,1125,	0,51887,58002,66084,96156,115849,123177,126910,141875,215962,216412,220364,220714,226672,232169,234461,266923,
#Partially deleted in new
chrX	21374618	21654552	chrX:21374618-21654552	3	+	21374897	21652521	0	22	343,164,203,88,42,120,60,69,147,134,212,90,215,49,173,74,72,68,101,547,197,2247,	0,51878,57993,66075,96147,115840,123168,126901,141866,152248,157237,186852,188619,215953,216403,220355,220705,226663,232160,234452,274212,277687,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chrX	21374670	21645440	chrX:21374670-21645440	1	+	21374897	21641537	789624	19	291,164,203,88,42,120,60,69,134,212,215,49,173,74,72,68,101,547,3908,	0,51826,57941,66023,96095,115788,123116,126849,152196,157185,188567,215901,216351,220303,220653,226611,232108,234400,266862,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	21374728	21495691	chrX:21374728-21495691	0	+	21374728	21374728	8553170	7	233,164,203,88,80,42,5233,	0,51768,57883,65965,93866,96037,115730,
#Partially deleted in new
chrX	21374742	21642799	chrX:21374742-21642799	0	+	21374897	21637299	789624	21	219,164,203,88,42,120,60,69,134,212,90,215,49,173,74,72,68,101,547,141,1267,	0,51754,57869,65951,96023,115716,123044,126777,152124,157113,186728,188495,215829,216279,220231,220581,226539,232036,234328,262531,266790,
#Partially deleted in new
chrX	21374752	21532195	chrX:21374752-21532195	0	+	21374752	21374752	8553170	10	209,164,203,88,42,120,60,69,134,340,	0,51744,57859,65941,96013,115706,123034,126767,152114,157103,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	21374768	21429776	chrX:21374768-21429776	0	+	21374768	21374768	8553170	2	193,3280,	0,51728,
#Partially deleted in new
chrX	21374793	21642657	chrX:21374793-21642657	1	+	21374897	21641537	789624	19	168,164,203,88,42,120,60,69,134,212,215,49,161,74,72,68,101,547,1125,	0,51703,57818,65900,95972,115665,122993,126726,152073,157062,188444,215778,216240,220180,220530,226488,231985,234277,266739,
#Partially deleted in new
chrX	21374799	21591485	chrX:21374799-21591485	0	+	21374799	21374799	8553170	13	162,164,203,88,42,120,60,69,134,212,215,49,464,	0,51697,57812,65894,95966,115659,122987,126720,152067,157056,188438,215772,216222,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chrX	21374827	21654030	chrX:21374827-21654030	0	+	21374827	21374827	8553170	20	134,164,203,88,42,120,60,69,147,134,212,215,49,4026,72,68,101,547,197,1725,	0,51669,57784,65866,95938,115631,122959,126692,141657,152039,157028,188410,215744,216194,220496,226454,231951,234243,274003,277478,
#Partially deleted in new
chrX	21374832	21591467	chrX:21374832-21591467	0	+	21374832	21374832	8553170	15	129,164,203,88,42,120,60,69,147,134,212,90,215,49,446,	0,51664,57779,65861,95933,115626,122954,126687,141652,152034,157023,186638,188405,215739,216189,
#Deleted in new
chrX	21421821	21422294	chrX:21421821-21422294	7	-	21421821	21421821	16724991	1	473,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	21423294	21532004	chrX:21423294-21532004	0	+	21423294	21423294	8553170	10	3366,203,88,42,120,60,69,147,134,149,	0,9317,17399,47471,67164,74492,78225,93190,103572,108561,
#Partially deleted in new
chrX	21426496	21643600	chrX:21426496-21643600	0	+	21426496	21490543	789624	21	164,203,88,80,42,120,60,69,147,134,212,90,215,49,173,74,72,68,101,547,2068,	0,6115,14197,42098,44269,63962,71290,75023,89988,100370,105359,134974,136741,164075,164525,168477,168827,174785,180282,182574,215036,
#Partially deleted in new
chrX	21426579	21531968	chrX:21426579-21531968	0	+	21426579	21426579	8553170	8	81,203,88,42,120,60,69,113,	0,6032,14114,44186,63879,71207,74940,105276,
#Partially deleted in new
chrX	21426611	21470878	chrX:21426611-21470878	0	+	21426611	21426611	8553170	4	49,203,88,113,	0,6000,14082,44154,
#Partially deleted in new
chrX	21440729	21641628	chrX:21440729-21641628	0	+	21440729	21641537	789624	13	52,147,134,212,215,49,173,74,72,68,101,547,96,	0,75755,86137,91126,122508,149842,150292,154244,154594,160552,166049,168341,200803,
#Partially deleted in new
chrX	21470733	21652822	chrX:21470733-21652822	0	+	21470733	21470733	8553170	17	74,120,60,69,134,212,90,215,49,173,74,72,68,101,547,197,517,	0,19725,27053,30786,56133,61122,90737,92504,119838,120288,124240,124590,130548,136045,138337,178097,181572,
#Partially deleted in new
chrX	21501474	21609569	chrX:21501474-21609569	0	+	21501474	21501474	8553170	13	114,147,134,212,90,215,49,173,74,72,68,101,499,	0,15010,25392,30381,59996,61763,89097,89547,93499,93849,99807,105304,107596,
#Partially deleted in new
chrX	21531858	21654258	chrX:21531858-21654258	0	+	21531858	21595347	789624	11	209,90,215,49,173,72,68,101,547,197,1953,	0,29612,31379,58713,59163,63465,69423,74920,77212,116972,120447,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	21537867	21654108	chrX:21537867-21654108	0	+	21537867	21537867	8553170	12	1081,90,215,49,173,74,72,68,101,547,197,1803,	0,23603,25370,52704,53154,57106,57456,63414,68911,71203,110963,114438,
#Partially deleted in new
chrX	21594870	21642357	chrX:21594870-21642357	0	+	21594870	21594870	8553170	5	525,68,101,547,825,	0,6411,11908,14200,46662,
#Partially deleted in new
chrX	21595222	21652744	chrX:21595222-21652744	0	+	21595222	21595222	8553170	6	173,68,101,547,197,439,	0,6059,11556,13848,53608,57083,
#Partially deleted in new
chrX	21606530	21654257	chrX:21606530-21654257	0	+	21606530	21606530	8553170	5	52,101,547,197,1952,	0,248,2540,42300,45775,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	21643395	21652890	chrX:21643395-21652890	0	+	21643395	21643395	8553170	3	2400,197,585,	0,5435,8910,
#Partially deleted in new
chrX	21645378	21654243	chrX:21645378-21654243	0	+	21645378	21645378	8553170	3	521,197,1938,	0,3452,6927,
#Deleted in new
chrX	21654689	21658330	chrX:21654689-21658330	3	-	21655853	21657788	789624	1	3641,	0,
#Partially deleted in new
chrX	21705971	21758163	chrX:21705971-21758163	3	-	21737562	21754290	789624	5	423,149,87,57,222,	0,31577,37778,48274,51970,
#Partially deleted in new
chrX	21705971	21758116	chrX:21705971-21758116	1	-	21737562	21754290	789624	5	423,149,87,57,175,	0,31577,37778,48274,51970,
#Partially deleted in new
chrX	21706337	21758022	chrX:21706337-21758022	0	-	21737562	21754290	789624	6	57,102,149,87,57,81,	0,27318,31211,37412,47908,51604,
#Partially deleted in new
chrX	21727290	21758078	chrX:21727290-21758078	1	-	21737562	21754290	789624	5	337,149,87,57,137,	0,10258,16459,26955,30651,
#Partially deleted in new
chrX	21839635	21885424	chrX:21839635-21885424	3	+	21839734	21882655	789624	11	174,149,214,104,128,119,181,95,196,76,2992,	0,3534,5535,11873,13740,28831,29862,38406,38861,41261,42797,
#Partially deleted in new
chrX	21839635	21857593	chrX:21839635-21857593	0	+	21839635	21839635	8553170	6	174,149,214,104,128,1093,	0,3534,5535,11873,13740,16865,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	21839653	21873084	chrX:21839653-21873084	1	+	21839734	21869701	789624	7	156,149,214,104,128,119,3587,	0,3516,5517,11855,13722,28813,29844,
#Deleted in new
chrX	21841793	21841961	chrX:21841793-21841961	7	-	21841793	21841793	16724991	1	168,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	21855986	21858727	chrX:21855986-21858727	3	+	21856484	21857603	789624	1	2741,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	21872706	21872808	chrX:21872706-21872808	3	+	21872706	21872706	8553170	1	102,	0,
#Deleted in new
chrX	21939460	21940160	chrX:21939460-21940160	7	+	21939460	21939460	16724991	1	700,	0,
#Partially deleted in new
chrX	21940572	21994835	chrX:21940572-21994835	3	+	21940824	21994351	0	11	301,121,94,65,176,155,90,115,80,116,524,	0,26623,31324,31934,36488,37387,38304,43731,44571,52024,53739,
#Partially deleted in new
chrX	21940714	21994473	chrX:21940714-21994473	1	+	21940824	21994351	0	9	159,121,176,155,90,115,80,116,162,	0,26481,36346,37245,38162,43589,44429,51882,53597,
#Partially deleted in new
chrX	21940777	21977989	chrX:21940777-21977989	0	+	21940777	21940777	8553170	5	96,121,65,176,30,	0,26418,31729,36283,37182,
#Partially deleted in new
chrX	21941044	21978111	chrX:21941044-21978111	0	+	21941044	21978111	789624	6	323,121,94,65,176,152,	0,26151,30852,31462,36016,36915,
#Partially deleted in new
chrX	22032440	22251310	chrX:22032440-22251310	3	+	22033005	22247953	789624	22	683,69,162,87,227,69,117,84,146,94,129,102,78,104,59,55,68,131,66,105,77,3460,	0,6028,14609,43947,45035,57988,61542,64514,66565,79026,82017,101082,135871,145832,158003,180463,186595,189172,194002,195066,212892,215410,
#Partially deleted in new
chrX	22090492	22099363	chrX:22090492-22099363	0	+	22090492	22090492	8553170	4	5,117,84,358,	0,3490,6462,8513,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	22162732	22172983	chrX:22162732-22172983	3	-	22162732	22162732	789624	5	639,62,32,135,1038,	0,7061,8426,8777,9213,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	22259796	23293146	chrX:22259796-23293146	3	-	22259796	22259796	8553170	6	46,58,110,84,126,133,	0,129866,483432,804241,1010254,1033217,
#Deleted in new
chrX	22272942	22274461	chrX:22272942-22274461	3	+	22272991	22274269	789624	1	1519,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	22389314	23064119	chrX:22389314-23064119	1	-	22389314	22389314	8553170	4	406,134,96,82,	0,231609,554738,674723,
#Partially deleted in new
chrX	22428131	22494713	chrX:22428131-22494713	3	+	22428131	22428131	8553170	3	234,57,98,	0,61716,66484,
#Deleted in new
chrX	22435597	22436818	chrX:22435597-22436818	7	+	22435597	22435597	16724991	1	1221,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	22527834	22527941	chrX:22527834-22527941	3	+	22527834	22527834	8553170	1	107,	0,
#Deleted in new
chrX	22616743	22617143	chrX:22616743-22617143	7	-	22616743	22616743	16724991	1	400,	0,
#Partially deleted in new
chrX	22698456	22768966	chrX:22698456-22768966	3	+	22698456	22698456	8553170	2	108,274,	0,70236,
#Deleted in new
chrX	22999960	23003589	chrX:22999960-23003589	3	+	23000057	23001953	0	1	3629,	0,
#Partially deleted in new
chrX	23075757	23076767	chrX:23075757-23076767	7	+	23075757	23075757	16724991	2	582,99,	0,911,
#Deleted in new
chrX	23198338	23198690	chrX:23198338-23198690	7	+	23198338	23198338	16724991	1	352,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	23334015	23404372	chrX:23334015-23404372	3	+	23334875	23394185	789624	3	1211,661,11842,	0,45575,58515,
#Partially deleted in new
chrX	23335068	23393108	chrX:23335068-23393108	0	+	23335068	23392683	789624	2	158,578,	0,57462,
#Partially deleted in new
chrX	23351012	23351450	chrX:23351012-23351450	7	+	23351012	23351012	16724991	1	438,	0,
#Partially deleted in new
chrX	23664261	23679287	chrX:23664261-23679287	0	+	23664519	23679287	789624	4	457,118,117,123,	0,7267,10728,14903,
#Partially deleted in new
chrX	23667445	23686399	chrX:23667445-23686399	3	+	23667570	23686335	0	7	366,118,117,123,131,35,115,	0,4083,7544,11719,14950,16225,18839,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	23667498	23679208	chrX:23667498-23679208	0	+	23667498	23667498	8553170	5	313,40,118,117,44,	0,3895,4030,7491,11666,
#Partially deleted in new
chrX	23667550	23675462	chrX:23667550-23675462	1	+	23667570	23675191	789624	3	261,118,473,	0,3978,7439,
#Partially deleted in new
chrX	23674998	23686395	chrX:23674998-23686395	0	+	23674998	23686325	789624	6	108,123,131,35,46,111,	0,4166,7397,8672,11003,11286,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chrX	23702252	23743273	chrX:23702252-23743273	1	-	23703893	23743144	789624	16	1730,151,88,86,91,112,68,74,104,84,38,171,46,27,98,149,	0,2441,2740,3256,3515,4375,5624,10882,19628,20417,28274,28563,30919,32088,33666,40872,
#Partially deleted in new
chrX	23703670	23743276	chrX:23703670-23743276	3	-	23703893	23743144	789624	15	312,151,88,86,91,112,68,74,104,84,38,171,46,98,152,	0,1023,1322,1838,2097,2957,4206,9464,18210,18999,26856,27145,29501,32248,39454,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	23703676	23707200	chrX:23703676-23707200	0	-	23703676	23703676	8553170	6	306,151,88,86,91,573,	0,1017,1316,1832,2091,2951,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chrX	23703683	23766475	chrX:23703683-23766475	1	-	23703893	23730970	789624	17	299,151,88,86,91,112,68,74,104,84,38,171,46,98,183,146,929,	0,1010,1309,1825,2084,2944,4193,9451,18197,18986,26843,27132,29488,32235,53243,58753,61863,
#Partially deleted in new
chrX	23703704	23743290	chrX:23703704-23743290	0	-	23735895	23743144	789624	15	278,151,88,86,91,112,68,74,104,84,38,171,40,131,166,	0,989,1288,1804,2063,2923,4172,9430,18176,18965,26822,27111,29467,32181,39420,
#Partially deleted in new
chrX	23705057	23733197	chrX:23705057-23733197	0	-	23705057	23733197	789624	10	23,86,91,112,68,74,104,38,171,26,	0,451,710,1570,2819,8077,16823,25469,25758,28114,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	23707716	23722742	chrX:23707716-23722742	0	-	23707716	23707716	8553170	4	228,74,104,73,	0,5418,14164,14953,
#Partially deleted in new
chrX	23707830	23743250	chrX:23707830-23743250	1	-	23707914	23730970	789624	7	114,104,84,38,171,46,126,	0,14050,14839,22696,22985,25341,35294,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	23772991	23782956	chrX:23772991-23782956	3	-	23772991	23772991	8553170	3	519,81,72,	0,9576,9893,
#Partially deleted in new
chrX	23783172	23784213	chrX:23783172-23784213	1	+	23783351	23784044	789624	2	245,556,	0,485,
#Partially deleted in new
chrX	23783172	23784411	chrX:23783172-23784411	1	+	23783351	23784044	789624	3	245,52,612,	0,485,627,
#Partially deleted in new
chrX	23783172	23786113	chrX:23783172-23786113	1	+	23783351	23785856	789624	5	245,52,102,41,428,	0,485,2155,2347,2513,
#Partially deleted in new
chrX	23783172	23786226	chrX:23783172-23786226	3	+	23783351	23785856	0	6	245,52,84,102,41,541,	0,485,627,2155,2347,2513,
#Partially deleted in new
chrX	23783196	23786210	chrX:23783196-23786210	0	+	23783196	23783196	789624	7	221,52,84,110,102,41,525,	0,461,603,1097,2131,2323,2489,
#Partially deleted in new
chrX	23783336	23786109	chrX:23783336-23786109	0	+	23783336	23783336	8553170	6	81,21,66,102,41,424,	0,321,1001,1991,2183,2349,
#Partially deleted in new
chrX	23783507	23784029	chrX:23783507-23784029	0	+	23783507	23783507	8553170	2	202,230,	0,292,
#Partially deleted in new
chrX	23784752	23786000	chrX:23784752-23786000	0	+	23784752	23784752	8553170	3	677,41,315,	0,767,933,
#Partially deleted in new
chrX	23785259	23786210	chrX:23785259-23786210	0	+	23785259	23785259	8553170	2	301,525,	0,426,
#Partially deleted in new
chrX	23833352	23907934	chrX:23833352-23907934	3	-	23840341	23907702	789624	9	260,65,81,92,96,55,120,108,241,	0,6960,22949,25289,35240,41050,45562,47492,74341,
#Partially deleted in new
chrX	23833352	23868612	chrX:23833352-23868612	0	-	23840341	23868612	789624	4	260,65,92,20,	0,6960,25289,35240,
#Partially deleted in new
chrX	23833356	23868655	chrX:23833356-23868655	0	-	23840341	23868655	789624	6	154,6,65,81,92,63,	0,250,6956,22945,25285,35236,
#Partially deleted in new
chrX	23833359	23840405	chrX:23833359-23840405	0	-	23833359	23833359	8553170	2	151,93,	0,6953,
#Partially deleted in new
chrX	23833362	23880901	chrX:23833362-23880901	0	-	23840341	23880901	789624	8	148,65,81,92,96,55,120,57,	0,6950,22939,25279,35230,41040,45552,47482,
#Partially deleted in new
chrX	23833366	23907903	chrX:23833366-23907903	0	-	23858721	23907702	789624	8	144,65,81,92,96,120,108,210,	0,6946,22935,25275,35226,45548,47478,74327,
#Partially deleted in new
chrX	23833423	23840836	chrX:23833423-23840836	0	-	23833423	23833423	8553170	3	87,65,260,	0,6889,7153,
#Deleted in new
chrX	23836741	23837321	chrX:23836741-23837321	7	-	23836741	23836741	16724991	1	580,	0,
#Partially deleted in new
chrX	23840026	23879007	chrX:23840026-23879007	0	-	23840026	23840026	8553170	5	351,81,92,96,93,	0,16275,18615,28566,38888,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	23856355	23884019	chrX:23856355-23884019	0	-	23856355	23874430	789624	7	27,92,96,55,120,108,661,	0,2286,12237,18047,22559,24489,27003,
#Partially deleted in new
chrX	23907800	23939507	chrX:23907800-23939507	3	+	23910302	23939303	789624	9	529,136,100,95,112,132,230,154,264,	0,2482,3956,7899,8416,19438,27395,30746,31443,
#Partially deleted in new
chrX	23908053	23939509	chrX:23908053-23939509	1	+	23910302	23939303	8553170	10	276,136,100,95,112,123,132,230,154,266,	0,2229,3703,7646,8163,15031,19185,27142,30493,31190,
#Partially deleted in new
chrX	23910382	23916501	chrX:23910382-23916501	0	+	23910382	23916364	789624	4	36,100,95,285,	0,1374,5317,5834,
#Partially deleted in new
chrX	23983719	24027186	chrX:23983719-24027186	3	-	23987920	24006693	789624	4	5311,712,202,47,	0,22269,41137,43420,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	24054715	24077971	chrX:24054715-24077971	3	+	24054968	24076785	0	12	322,64,128,122,95,159,135,95,145,170,173,1250,	0,899,2705,2917,5372,7700,9485,11282,13248,16842,18375,22006,
#Partially deleted in new
chrX	24054945	24062626	chrX:24054945-24062626	0	+	24054945	24054945	8553170	3	92,64,211,	0,669,7470,
#Partially deleted in new
chrX	24054970	24060479	chrX:24054970-24060479	0	+	24054970	24060256	789624	5	67,64,128,122,392,	0,644,2450,2662,5117,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	24071712	24073528	chrX:24071712-24073528	0	+	24071712	24071712	8553170	2	15,438,	0,1378,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	24073261	24077408	chrX:24073261-24077408	0	+	24073261	24073261	8553170	2	150,65,	0,4082,
#Partially deleted in new
chrX	24133185	24133317	chrX:24133185-24133317	3	+	24133185	24133185	8553170	1	132,	0,
#Partially deleted in new
chrX	24146224	24149654	chrX:24146224-24149654	3	-	24146224	24146224	789624	3	227,90,100,	0,2528,3330,
#Deleted in new
chrX	24149172	24150819	chrX:24149172-24150819	0	+	24149172	24149172	8553170	3	81,80,314,	0,542,1333,
#Partially deleted in new
chrX	24149628	24179530	chrX:24149628-24179530	0	+	24172742	24179530	789624	3	166,86,348,	0,23086,29554,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	24149644	24216255	chrX:24149644-24216255	1	+	24207366	24211376	789624	6	150,150,144,153,141,6063,	0,57681,58067,58573,59255,60548,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	24149723	24216255	chrX:24149723-24216255	1	+	24172742	24211376	789624	9	71,86,117,588,150,144,153,141,6063,	0,22991,23883,29459,57602,57988,58494,59176,60469,
#Partially deleted in new
chrX	24149728	24179219	chrX:24149728-24179219	0	+	24172742	24179219	789624	4	66,111,86,37,	0,2991,22986,29454,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	24149744	24216089	chrX:24149744-24216089	3	+	24172742	24211376	789624	11	50,110,111,128,86,588,150,144,153,141,5897,	0,1946,2975,11970,22970,29438,57581,57967,58473,59155,60448,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	24149789	24211700	chrX:24149789-24211700	1	+	24172742	24211376	789624	10	5,110,111,86,588,150,144,153,141,1508,	0,1901,2930,22925,29393,57536,57922,58428,59110,60403,
#Partially deleted in new
chrX	24149853	24209001	chrX:24149853-24209001	0	+	24149853	24149853	8553170	4	277,150,144,102,	0,57472,57858,59046,
#Partially deleted in new
chrX	24151425	24172914	chrX:24151425-24172914	0	+	24151425	24151425	8553170	3	56,111,200,	0,1294,21289,
#Partially deleted in new
chrX	24172714	24211986	chrX:24172714-24211986	1	+	24172742	24211376	789624	6	86,588,144,153,141,1794,	0,6468,34997,35503,36185,37478,
#Deleted in new
chrX	24310906	24313315	chrX:24310906-24313315	7	-	24310906	24310906	16724991	1	2409,	0,
#Deleted in new
chrX	24362760	24365378	chrX:24362760-24365378	7	+	24362760	24362760	16724991	1	2618,	0,
#Partially deleted in new
chrX	24429572	24429920	chrX:24429572-24429920	7	-	24429572	24429572	16724991	1	348,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	24465220	24534425	chrX:24465220-24534425	1	+	24465455	24534072	0	11	341,142,72,185,90,78,77,102,111,114,497,	0,29521,33608,38106,39988,53712,60977,62353,62855,66436,68708,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	24465269	24541862	chrX:24465269-24541862	0	+	24465455	24534072	8553170	12	292,142,72,185,90,78,77,102,111,114,728,2729,	0,29472,33559,38057,39939,53663,60928,62304,62806,66387,68659,73864,
#Partially deleted in new
chrX	24465455	24539837	chrX:24465455-24539837	3	+	24465455	24539164	0	12	106,142,72,185,90,78,77,102,111,114,140,704,	0,29286,33373,37871,39753,53477,60742,62118,62620,66201,68473,73678,
#Partially deleted in new
chrX	24494740	24499081	chrX:24494740-24499081	0	+	24494740	24494740	8553170	2	143,253,	0,4088,
#Deleted in new
chrX	24513449	24513687	chrX:24513449-24513687	7	+	24513449	24513449	16724991	1	238,	0,
#Deleted in new
chrX	24545515	24550466	chrX:24545515-24550466	3	+	24545515	24545515	8553170	1	4951,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	24558086	24672677	chrX:24558086-24672677	1	-	24562292	24672632	789624	8	4419,189,143,79,152,117,100,108,	0,17043,21229,29154,31936,49658,60898,114483,
#Partially deleted in new
chrX	24561841	24647158	chrX:24561841-24647158	1	-	24562084	24647105	789624	9	276,63,189,143,79,152,117,100,170,	0,601,13288,17474,25399,28181,45903,57143,85147,
#Partially deleted in new
chrX	24561841	24647236	chrX:24561841-24647236	3	-	24562292	24647105	789624	8	664,189,143,79,152,117,100,248,	0,13288,17474,25399,28181,45903,57143,85147,
#Partially deleted in new
chrX	24562400	24647038	chrX:24562400-24647038	0	-	24579332	24647027	789624	7	105,189,143,152,117,100,50,	0,12729,16915,27622,45344,56584,84588,
#Partially deleted in new
chrX	24632256	24632601	chrX:24632256-24632601	7	+	24632256	24632256	16724991	1	345,	0,
#Partially deleted in new
chrX	24650072	24658237	chrX:24650072-24658237	3	+	24650072	24650072	789624	2	77,198,	0,7967,
#Partially deleted in new
chrX	24681908	24682634	chrX:24681908-24682634	7	+	24681908	24681908	16724991	2	240,176,	0,550,
#Partially deleted in new
chrX	24693918	24996986	chrX:24693918-24996986	3	+	24693961	24995950	789624	37	86,125,97,81,116,63,93,88,202,179,113,117,75,139,155,85,62,90,117,176,130,120,100,125,150,123,33,93,206,133,132,175,179,132,117,97,1182,	0,5506,9332,10470,20635,21222,22443,22965,23371,23661,29236,30416,32062,33014,33863,38451,39836,41480,43706,45456,47456,48083,49311,51499,54392,54951,115979,116789,118739,121060,127533,132508,147733,149627,194087,236534,301886,
#Partially deleted in new
chrX	24693946	24996986	chrX:24693946-24996986	1	+	24693961	24995950	0	37	40,125,97,81,116,63,93,88,202,179,113,117,75,139,155,85,62,90,117,176,130,120,100,125,150,123,33,93,206,133,132,175,179,132,117,97,1182,	0,5478,9304,10442,20607,21194,22415,22937,23343,23633,29208,30388,32034,32986,33835,38423,39808,41452,43678,45428,47428,48055,49283,51471,54364,54923,115951,116761,118711,121032,127505,132480,147705,149599,194059,236506,301858,
#Partially deleted in new
chrX	24693946	24996983	chrX:24693946-24996983	1	+	24693961	24995950	789624	38	40,125,97,81,116,63,93,88,202,179,113,117,75,139,5,147,85,62,90,117,176,130,120,100,125,150,123,33,93,206,133,132,175,179,132,117,97,1179,	0,5478,9304,10442,20607,21194,22415,22937,23343,23633,29208,30388,32034,32986,33837,33843,38423,39808,41452,43678,45428,47428,48055,49283,51471,54364,54923,115951,116761,118711,121032,127505,132480,147705,149599,194059,236506,301858,
#Partially deleted in new
chrX	24726932	24734353	chrX:24726932-24734353	0	+	24726932	24726932	8553170	4	139,155,85,599,	0,849,5437,6822,
#Deleted in new
chrX	24744440	24744570	chrX:24744440-24744570	3	+	24744440	24744440	789624	1	130,	0,
#Partially deleted in new
chrX	24745502	24810781	chrX:24745502-24810781	0	+	24745502	24745502	8553170	6	40,150,123,160,33,74,	0,2808,3367,29694,64395,65205,
#Partially deleted in new
chrX	24788391	24789069	chrX:24788391-24789069	7	-	24788391	24788391	16724991	1	678,	0,
#Partially deleted in new
chrX	24812829	24841983	chrX:24812829-24841983	0	+	24812829	24812829	8553170	5	34,133,132,175,332,	0,2149,8622,13597,28822,
#Partially deleted in new
chrX	25003693	25015948	chrX:25003693-25015948	3	-	25004669	25015737	789624	5	1217,329,46,877,407,	0,3417,6566,9228,11848,
#Deleted in new
chrX	25004859	25006005	chrX:25004859-25006005	0	-	25004859	25004859	8553170	2	51,36,	0,1110,
#Deleted in new
chrX	25006544	25007171	chrX:25006544-25007171	0	-	25006544	25007171	789624	2	83,61,	0,566,
#Deleted in new
chrX	25015580	25016205	chrX:25015580-25016205	0	-	25015580	25015580	8553170	2	65,35,	0,590,
#Deleted in new
chrX	25015612	25016420	chrX:25015612-25016420	0	-	25015612	25015612	8553170	2	33,67,	0,741,
#Deleted in new
chrX	25029544	25030235	chrX:25029544-25030235	7	+	25029544	25029544	16724991	1	691,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	25060648	25060939	chrX:25060648-25060939	3	-	25060648	25060648	8553170	1	291,	0,
#Deleted in new
chrX	25194380	25195207	chrX:25194380-25195207	7	-	25194380	25194380	16724991	1	827,	0,
#Deleted in new
chrX	25591352	25591808	chrX:25591352-25591808	7	-	25591352	25591352	16724991	1	456,	0,
#Deleted in new
chrX	25645721	25646327	chrX:25645721-25646327	7	-	25645721	25645721	16724991	1	606,	0,
#Deleted in new
chrX	26138342	26140735	chrX:26138342-26140735	3	+	26138985	26140017	789624	3	125,1130,556,	0,581,1837,
#Deleted in new
chrX	26147773	26148281	chrX:26147773-26148281	7	+	26147773	26147773	16724991	1	508,	0,
#Deleted in new
chrX	26160600	26161824	chrX:26160600-26161824	3	+	26160600	26161824	789624	1	1224,	0,
#Deleted in new
chrX	26170051	26170913	chrX:26170051-26170913	7	+	26170051	26170051	16724991	1	862,	0,
#Partially deleted in new
chrX	26192439	26195646	chrX:26192439-26195646	3	+	26193846	26195070	789624	2	88,1861,	0,1346,
#Deleted in new
chrX	26200041	26200647	chrX:26200041-26200647	7	+	26200041	26200041	16724991	1	606,	0,
#Deleted in new
chrX	26216168	26218270	chrX:26216168-26218270	3	+	26217301	26218129	789624	2	30,1186,	0,916,
#Deleted in new
chrX	26223902	26224658	chrX:26223902-26224658	7	+	26223902	26223902	16724991	1	756,	0,
#Partially deleted in new
chrX	26345235	26346242	chrX:26345235-26346242	7	+	26345235	26345235	16724991	2	305,345,	0,662,
#Partially deleted in new
chrX	26496935	26505603	chrX:26496935-26505603	7	+	26496935	26496935	16724991	2	279,1345,	0,7323,
#Deleted in new
chrX	26557674	26558330	chrX:26557674-26558330	7	+	26557674	26557674	16724991	1	656,	0,
#Deleted in new
chrX	26558336	26561052	chrX:26558336-26561052	3	+	26558336	26558336	789624	1	2716,	0,
#Deleted in new
chrX	26657290	26657507	chrX:26657290-26657507	7	-	26657290	26657290	16724991	1	217,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	26686025	26687955	chrX:26686025-26687955	7	+	26686025	26686025	16724991	2	165,593,	0,1337,
#Deleted in new
chrX	26748028	26749090	chrX:26748028-26749090	7	+	26748028	26748028	16724991	1	1062,	0,
#Partially deleted in new
chrX	26790141	26790286	chrX:26790141-26790286	3	+	26790141	26790141	8553170	1	145,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	27042906	27158993	chrX:27042906-27158993	3	-	27042906	27042906	8553170	2	214,89,	0,115998,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	27128804	27176298	chrX:27128804-27176298	1	-	27128804	27128804	8553170	6	79,192,156,105,83,58,	0,30100,33616,40231,41062,47436,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	27174919	27398997	chrX:27174919-27398997	3	-	27174919	27174919	8553170	6	1465,118,64,84,87,61,	0,11620,90828,161490,223831,224017,
#Deleted in new
chrX	27218130	27218678	chrX:27218130-27218678	7	-	27218130	27218130	16724991	1	548,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	27252118	27252235	chrX:27252118-27252235	3	-	27252118	27252118	8553170	1	117,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	27350023	27398989	chrX:27350023-27398989	1	-	27350023	27350023	8553170	5	800,91,50,87,53,	0,43518,44956,48727,48913,
#Deleted in new
chrX	27427776	27428231	chrX:27427776-27428231	7	-	27427776	27427776	16724991	1	455,	0,
#Deleted in new
chrX	27460210	27463341	chrX:27460210-27463341	3	-	27460797	27463296	789624	1	3131,	0,
#Deleted in new
chrX	27517770	27517881	chrX:27517770-27517881	7	-	27517770	27517770	16724991	1	111,	0,
#Partially deleted in new
chrX	27517883	27519759	chrX:27517883-27519759	7	+	27517883	27517883	16724991	2	576,969,	0,907,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	27590381	27712636	chrX:27590381-27712636	0	+	27590381	27590381	8553170	6	59,107,122,100,77,79,	0,36970,41497,86564,87454,122176,
#Partially deleted in new
chrX	27590381	27746883	chrX:27590381-27746883	0	+	27590381	27590381	8553170	7	59,122,100,77,92,84,46,	0,41497,86564,87454,122176,125706,156456,
#Partially deleted in new
chrX	27590382	27748791	chrX:27590382-27748791	3	+	27746895	27748791	789624	5	58,122,77,84,1954,	0,41496,87453,125705,156455,
#Partially deleted in new
chrX	27590399	27746983	chrX:27590399-27746983	0	+	27746895	27746983	789624	6	41,122,77,92,84,146,	0,41479,87436,122158,125688,156438,
#Partially deleted in new
chrX	27590412	27633795	chrX:27590412-27633795	0	+	27590412	27590412	789624	2	28,1917,	0,41466,
#Deleted in new
chrX	27746808	27748821	chrX:27746808-27748821	1	+	27746895	27748791	789624	1	2013,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	27807989	27823014	chrX:27807989-27823014	3	+	27821306	27822350	789624	3	47,149,1757,	0,9564,13268,
#Deleted in new
chrX	27811884	27812902	chrX:27811884-27812902	7	+	27811884	27811884	16724991	1	1018,	0,
#Deleted in new
chrX	27821257	27822646	chrX:27821257-27822646	1	+	27821306	27822350	789624	1	1389,	0,
#Deleted in new
chrX	27832174	27833204	chrX:27832174-27833204	7	+	27832174	27832174	16724991	1	1030,	0,
#Deleted in new
chrX	27847587	27847939	chrX:27847587-27847939	7	-	27847587	27847587	16724991	1	352,	0,
#Deleted in new
chrX	27854322	27855353	chrX:27854322-27855353	7	+	27854322	27854322	16724991	1	1031,	0,
#Deleted in new
chrX	27863892	27864349	chrX:27863892-27864349	7	+	27863892	27863892	16724991	1	457,	0,
#Deleted in new
chrX	27893347	27894059	chrX:27893347-27894059	7	-	27893347	27893347	16724991	1	712,	0,
#Deleted in new
chrX	27977992	27981449	chrX:27977992-27981449	3	-	27979531	27981334	789624	1	3457,	0,
#Deleted in new
chrX	28495554	28495663	chrX:28495554-28495663	3	-	28495554	28495554	5263520	1	109,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	28571531	28586395	chrX:28571531-28586395	3	-	28571531	28571531	8553170	3	550,118,88,	0,4773,14776,
#Partially deleted in new
chrX	28587398	29956723	chrX:28587398-29956723	3	+	28789343	29955820	0	11	649,106,280,187,154,75,133,146,144,171,1622,	0,201921,695539,808859,811756,1081031,1330065,1332550,1354252,1367123,1367703,
#Deleted in new
chrX	28659064	28659469	chrX:28659064-28659469	7	-	28659064	28659064	16724991	1	405,	0,
#Deleted in new
chrX	28924068	28924138	chrX:28924068-28924138	3	+	28924068	28924068	8553170	1	70,	0,
#Deleted in new
chrX	28942049	28942568	chrX:28942049-28942568	3	+	28942049	28942049	8553170	2	96,369,	0,150,
#Deleted in new
chrX	29369000	29369845	chrX:29369000-29369845	7	-	29369000	29369000	16724991	1	845,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	29574277	29574358	chrX:29574277-29574358	3	+	29574277	29574277	5263520	1	81,	0,
#Partially deleted in new
chrX	29917462	29955820	chrX:29917462-29955820	1	+	29917462	29955820	789624	5	134,146,144,171,719,	0,2486,24188,37059,37639,
#Deleted in new
chrX	30017159	30017881	chrX:30017159-30017881	7	-	30017159	30017159	16724991	1	722,	0,
#Deleted in new
chrX	30209422	30210209	chrX:30209422-30210209	7	+	30209422	30209422	16724991	1	787,	0,
#Partially deleted in new
chrX	30215559	30220089	chrX:30215559-30220089	3	+	30218580	30219540	789624	2	96,1514,	0,3016,
#Partially deleted in new
chrX	30230435	30237492	chrX:30230435-30237492	3	+	30235924	30236965	789624	5	382,102,90,102,1629,	0,1081,2391,2826,5428,
#Deleted in new
chrX	30235893	30237022	chrX:30235893-30237022	1	+	30235924	30236965	789624	1	1129,	0,
#Deleted in new
chrX	30242051	30244193	chrX:30242051-30244193	3	+	30242135	30243176	789624	1	2142,	0,
#Partially deleted in new
chrX	30243729	30252038	chrX:30243729-30252038	3	+	30250493	30251537	789624	4	73,105,83,1605,	0,2559,3660,6704,
#Partially deleted in new
chrX	30243730	30252038	chrX:30243730-30252038	1	+	30250493	30251537	789624	3	72,105,1605,	0,2558,6703,
#Partially deleted in new
chrX	30247153	30252038	chrX:30247153-30252038	1	+	30250493	30251537	789624	2	103,1605,	0,3280,
#Deleted in new
chrX	30290046	30290351	chrX:30290046-30290351	7	-	30290046	30290046	16724991	1	305,	0,
#Deleted in new
chrX	30304205	30309598	chrX:30304205-30309598	3	-	30304578	30309363	0	2	618,1403,	0,3990,
#Deleted in new
chrX	30305673	30308488	chrX:30305673-30308488	1	-	30305820	30308478	789624	2	182,293,	0,2522,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	30558823	30577844	chrX:30558823-30577844	3	-	30559449	30560355	789624	3	1533,115,207,	0,17928,18814,
#Partially deleted in new
chrX	30617453	30617693	chrX:30617453-30617693	7	+	30617453	30617453	16724991	1	240,	0,
#Deleted in new
chrX	30630297	30630825	chrX:30630297-30630825	7	+	30630297	30630297	16724991	1	528,	0,
#Partially deleted in new
chrX	30653358	30730608	chrX:30653358-30730608	3	+	30653537	30728742	789624	20	257,74,107,78,77,138,110,67,36,68,43,81,79,97,85,121,144,81,87,1877,	0,12152,14653,24016,37764,41041,42683,43258,47055,47479,54197,54695,65179,66060,66652,67262,67493,70742,74107,75373,
#Partially deleted in new
chrX	30653358	30730608	chrX:30653358-30730608	1	+	30653537	30728742	789624	20	257,74,107,78,77,138,110,67,18,36,68,43,81,79,97,85,121,144,81,1877,	0,12152,14653,24016,37764,41041,42683,43258,44373,47055,47479,54197,54695,65179,66060,66652,67262,67493,70742,75373,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chrX	30653358	30731456	chrX:30653358-30731456	1	+	30653537	30728742	789624	21	257,74,107,78,77,138,110,67,18,36,68,43,81,79,97,85,121,144,81,87,2725,	0,12152,14653,24016,37764,41041,42683,43258,44373,47055,47479,54197,54695,65179,66060,66652,67262,67493,70742,74107,75373,
#Partially deleted in new
chrX	30653477	30729170	chrX:30653477-30729170	1	+	30653537	30728742	789624	19	138,74,107,78,77,138,110,67,36,68,43,81,79,97,85,121,144,81,439,	0,12033,14534,23897,37645,40922,42564,43139,46936,47360,54078,54576,65060,65941,66533,67143,67374,70623,75254,
#Partially deleted in new
chrX	30653488	30729249	chrX:30653488-30729249	0	+	30653537	30674351	789624	22	127,74,107,165,78,77,138,110,67,18,36,68,43,81,79,97,85,121,144,81,87,518,	0,12022,14523,20813,23886,37634,40911,42553,43128,44243,46925,47349,54067,54565,65049,65930,66522,67132,67363,70612,73977,75243,
#Partially deleted in new
chrX	30653495	30696086	chrX:30653495-30696086	0	+	30653537	30691132	789624	7	120,74,78,77,138,50,45,	0,12015,23879,37627,40904,41587,42546,
#Partially deleted in new
chrX	30653499	30696662	chrX:30653499-30696662	0	+	30653537	30677410	789624	6	116,78,77,138,110,46,	0,23875,37623,40900,42542,43117,
#Partially deleted in new
chrX	30653506	30696062	chrX:30653506-30696062	0	+	30653537	30694442	789624	5	109,74,78,138,21,	0,12004,23868,40893,42535,
#Partially deleted in new
chrX	30653537	30678114	chrX:30653537-30678114	1	+	30653537	30678013	789624	5	78,74,107,78,121,	0,11973,14474,23837,24456,
#Partially deleted in new
chrX	30687522	30696103	chrX:30687522-30696103	0	+	30687522	30696103	789624	4	94,77,138,62,	0,3600,6877,8519,
#Partially deleted in new
chrX	30689471	30700885	chrX:30689471-30700885	0	+	30689471	30689597	789624	7	157,77,138,110,67,36,48,	0,1651,4928,6570,7145,10942,11366,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	30698206	30721932	chrX:30698206-30721932	3	+	30698206	30698206	8553170	2	211,351,	0,23375,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	30699997	30724174	chrX:30699997-30724174	3	-	30699997	30699997	8553170	2	187,464,	0,23713,
#Deleted in new
chrX	30720617	30721191	chrX:30720617-30721191	0	+	30720617	30721012	789624	2	124,340,	0,234,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	30821814	30823407	chrX:30821814-30823407	7	-	30821814	30821814	16724991	2	470,741,	0,852,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	30827441	30975084	chrX:30827441-30975084	3	-	30831426	30859588	789624	12	4134,102,84,94,161,1447,192,104,85,103,93,72,	0,6609,15524,19109,25336,26674,32045,39673,40023,44257,71629,147571,
#Partially deleted in new
chrX	30827442	30859720	chrX:30827442-30859720	1	-	30831426	30859588	789624	7	4133,102,84,94,161,1447,234,	0,6608,15523,19108,25335,26673,32044,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	30830330	30975084	chrX:30830330-30975084	1	-	30831426	30859588	789624	11	1245,102,94,161,1447,192,104,85,103,93,72,	0,3720,16220,22447,23785,29156,36784,37134,41368,68740,144682,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	30834620	30871802	chrX:30834620-30871802	0	-	30846527	30859588	789624	8	2215,3679,161,1447,192,104,85,104,	0,8345,18157,19495,24866,32494,32844,37078,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	30842987	30852887	chrX:30842987-30852887	0	-	30842987	30842987	8553170	4	62,139,94,110,	0,2945,3563,9790,
#Deleted in new
chrX	30854320	30854707	chrX:30854320-30854707	3	+	30854320	30854320	8553170	2	55,237,	0,150,
#Partially deleted in new
chrX	30855522	30889394	chrX:30855522-30889394	0	-	30855522	30859588	789624	6	40,192,104,85,103,281,	0,3964,11592,11942,16176,33591,
#Deleted in new
chrX	31071240	31072053	chrX:31071240-31072053	3	-	31071401	31071953	789624	1	813,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	31097676	31169556	chrX:31097676-31169556	0	-	31097676	31097676	8553170	2	507,114,	0,71766,
#Partially deleted in new
chrX	31119218	31266952	chrX:31119218-31266952	1	-	31121832	31266829	789624	17	2712,93,124,244,159,66,66,39,137,112,167,158,86,202,75,62,143,	0,14883,27072,28056,50224,53129,54320,58713,59450,61151,63519,84742,87363,90279,103828,141736,147591,
#Partially deleted in new
chrX	31119220	31875373	chrX:31119220-31875373	0	-	31121832	31875373	789624	30	2710,93,124,244,159,66,66,137,112,167,158,86,202,75,62,61,79,147,269,121,157,173,190,155,212,118,233,109,102,186,	0,14881,27070,28054,50222,53127,54318,59448,61149,63517,84740,87361,90277,103826,141734,204377,229335,325260,358885,359762,377567,388060,508452,538769,560154,610410,654739,700754,717497,755967,
#Partially deleted in new
chrX	31119227	31508298	chrX:31119227-31508298	1	-	31121918	31508237	789624	25	2703,32,93,124,244,159,66,66,39,137,112,167,158,86,202,75,62,61,79,147,269,121,157,173,91,	0,7414,14874,27063,28047,50215,53120,54311,58704,59441,61142,63510,84733,87354,90270,103819,141727,204370,229328,325253,358878,359755,377560,388053,388980,
#Partially deleted in new
chrX	31119227	33211519	chrX:31119227-33211519	3	-	31121918	33211312	789624	79	2703,32,93,124,244,159,66,66,39,137,112,167,158,86,202,75,62,61,79,147,269,121,157,173,190,155,212,118,233,109,102,186,150,148,176,148,173,195,183,153,138,123,171,129,180,171,156,174,111,162,150,135,183,171,156,114,213,146,181,242,88,124,176,180,108,102,120,151,182,189,129,182,119,173,93,78,93,62,238,	0,7414,14874,27063,28047,50215,53120,54311,58704,59441,61142,63510,84733,87354,90270,103819,141727,204370,229328,325253,358878,359755,377560,388053,508445,538762,560147,610403,654732,700747,717490,755960,810368,812852,849111,1097688,1168301,1190854,1222872,1223906,1226715,1229178,1243560,1245354,1245792,1261282,1267082,1270273,1270843,1292524,1319013,1321952,1329228,1335434,1344211,1345358,1349270,1352936,1365691,1372049,1382527,1398780,1425931,1446474,1454302,1454517,1476529,1495075,1524904,1525736,1578642,1579884,1690265,1697240,1704067,1725555,1730500,1900911,2092054,
#Partially deleted in new
chrX	31119227	32155469	chrX:31119227-32155469	1	-	31121832	31774121	789624	34	2703,93,124,244,159,66,66,137,112,167,158,86,202,75,62,61,79,147,269,121,157,173,190,155,212,118,233,109,102,186,150,148,176,99,	0,14874,27063,28047,50215,53120,54311,59441,61142,63510,84733,87354,90270,103819,141727,204370,229328,325253,358878,359755,377560,388053,508445,538762,560147,610403,654732,700747,717490,755960,810368,812852,849111,1036143,
#Partially deleted in new
chrX	31119227	33128360	chrX:31119227-33128360	1	-	31121918	33128165	789624	79	2703,32,93,124,244,159,66,66,39,137,112,167,158,86,202,75,62,61,79,147,269,121,157,173,190,155,212,118,233,109,102,186,150,148,176,148,173,195,183,153,138,123,171,129,180,171,156,174,111,162,150,135,183,171,156,114,213,146,181,242,88,124,176,180,108,102,120,151,182,189,129,182,119,173,93,78,93,62,214,	0,7414,14874,27063,28047,50215,53120,54311,58704,59441,61142,63510,84733,87354,90270,103819,141727,204370,229328,325253,358878,359755,377560,388053,508445,538762,560147,610403,654732,700747,717490,755960,810368,812852,849111,1097688,1168301,1190854,1222872,1223906,1226715,1229178,1243560,1245354,1245792,1261282,1267082,1270273,1270843,1292524,1319013,1321952,1329228,1335434,1344211,1345358,1349270,1352936,1365691,1372049,1382527,1398780,1425931,1446474,1454302,1454517,1476529,1495075,1524904,1525736,1578642,1579884,1690265,1697240,1704067,1725555,1730500,1900911,2008919,
#Partially deleted in new
chrX	31119227	32155469	chrX:31119227-32155469	1	-	31121918	31774121	789624	36	2703,32,93,124,244,159,66,66,39,137,112,167,158,86,202,75,62,61,79,147,269,121,157,173,190,155,212,118,233,109,102,186,150,148,176,99,	0,7414,14874,27063,28047,50215,53120,54311,58704,59441,61142,63510,84733,87354,90270,103819,141727,204370,229328,325253,358878,359755,377560,388053,508445,538762,560147,610403,654732,700747,717490,755960,810368,812852,849111,1036143,
#Partially deleted in new
chrX	31119227	32155469	chrX:31119227-32155469	1	-	31121918	31774121	789624	32	2703,32,93,124,244,137,112,167,158,86,202,75,62,61,79,147,269,121,157,173,190,155,212,118,233,109,102,186,150,148,176,99,	0,7414,14874,27063,28047,59441,61142,63510,84733,87354,90270,103819,141727,204370,229328,325253,358878,359755,377560,388053,508445,538762,560147,610403,654732,700747,717490,755960,810368,812852,849111,1036143,
#Partially deleted in new
chrX	31119227	33128165	chrX:31119227-33128165	1	-	31121918	33128165	789624	81	2703,32,93,124,244,159,66,66,39,137,112,167,158,86,202,75,62,61,79,147,269,121,157,173,190,155,212,118,233,109,102,186,150,148,112,37,15,157,173,195,183,153,138,123,171,129,180,171,156,174,111,162,150,135,183,171,156,114,213,146,181,242,88,124,176,180,108,102,120,151,182,189,129,182,119,173,93,78,93,62,19,	0,7414,14874,27063,28047,50215,53120,54311,58704,59441,61142,63510,84733,87354,90270,103819,141727,204370,229328,325253,358878,359755,377560,388053,508445,538762,560147,610403,654732,700747,717490,755960,810368,812852,849111,1032162,1097661,1097679,1168301,1190854,1222872,1223906,1226715,1229178,1243560,1245354,1245792,1261282,1267082,1270273,1270843,1292524,1319013,1321952,1329228,1335434,1344211,1345358,1349270,1352936,1365691,1372049,1382527,1398780,1425931,1446474,1454302,1454517,1476529,1495075,1524904,1525736,1578642,1579884,1690265,1697240,1704067,1725555,1730500,1900911,2008919,
#Partially deleted in new
chrX	31119227	33211312	chrX:31119227-33211312	1	-	31121918	33211312	789624	81	2703,32,93,124,244,159,66,66,39,137,112,167,158,86,202,75,62,61,79,147,269,121,157,173,190,155,212,118,233,109,102,186,150,148,112,37,15,157,173,195,183,153,138,123,171,129,180,171,156,174,111,162,150,135,183,171,156,114,213,146,181,242,88,124,176,180,108,102,120,151,182,189,129,182,119,173,93,78,93,62,31,	0,7414,14874,27063,28047,50215,53120,54311,58704,59441,61142,63510,84733,87354,90270,103819,141727,204370,229328,325253,358878,359755,377560,388053,508445,538762,560147,610403,654732,700747,717490,755960,810368,812852,849111,1032162,1097661,1097679,1168301,1190854,1222872,1223906,1226715,1229178,1243560,1245354,1245792,1261282,1267082,1270273,1270843,1292524,1319013,1321952,1329228,1335434,1344211,1345358,1349270,1352936,1365691,1372049,1382527,1398780,1425931,1446474,1454302,1454517,1476529,1495075,1524904,1525736,1578642,1579884,1690265,1697240,1704067,1725555,1730500,1900911,2092054,
#Partially deleted in new
chrX	31121183	31266857	chrX:31121183-31266857	1	-	31121918	31266829	789624	18	747,32,93,124,244,159,66,66,39,137,112,167,158,86,202,75,62,48,	0,5458,12918,25107,26091,48259,51164,52355,56748,57485,59186,61554,82777,85398,88314,101863,139771,145626,
#Partially deleted in new
chrX	31121396	32155469	chrX:31121396-32155469	1	-	31121832	31774121	789624	35	534,93,124,244,159,66,66,39,137,112,167,158,86,202,75,62,61,79,147,269,121,157,173,190,155,212,118,233,109,102,186,150,148,176,99,	0,12705,24894,25878,48046,50951,52142,56535,57272,58973,61341,82564,85185,88101,101650,139558,202201,227159,323084,356709,357586,375391,385884,506276,536593,557978,608234,652563,698578,715321,753791,808199,810683,846942,1033974,
#Partially deleted in new
chrX	31121555	31266907	chrX:31121555-31266907	1	-	31121832	31266829	789624	16	375,93,124,244,159,66,66,137,112,167,158,86,202,75,62,98,	0,12546,24735,25719,47887,50792,51983,57113,58814,61182,82405,85026,87942,101491,139399,145254,
#Partially deleted in new
chrX	31121672	31266949	chrX:31121672-31266949	1	-	31121832	31266829	789624	13	258,93,124,244,137,112,167,158,86,202,75,62,140,	0,12429,24618,25602,56996,58697,61065,82288,84909,87825,101374,139282,145137,
#Partially deleted in new
chrX	31169585	31206600	chrX:31169585-31206600	0	-	31169585	31206600	789624	8	16,66,39,137,112,167,158,19,	0,3953,8346,9083,10784,13152,34375,36996,
#Partially deleted in new
chrX	31178438	31182927	chrX:31178438-31182927	0	-	31178438	31178438	8553170	3	367,112,190,	0,1931,4299,
#Partially deleted in new
chrX	31209524	31435654	chrX:31209524-31435654	0	-	31209524	31209524	8553170	6	175,75,62,61,79,103,	0,13522,51430,114073,139031,226027,
#Deleted in new
chrX	31261107	31261778	chrX:31261107-31261778	0	-	31261107	31261107	8553170	1	671,	0,
#Partially deleted in new
chrX	31261107	31323630	chrX:31261107-31323630	0	-	31261107	31261107	8553170	2	622,33,	0,62490,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	31348191	31348296	chrX:31348191-31348296	3	+	31348191	31348191	8553170	1	105,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	31411032	31413701	chrX:31411032-31413701	3	+	31411032	31411032	8553170	2	646,1443,	0,1226,
#Partially deleted in new
chrX	31478318	31508481	chrX:31478318-31508481	0	-	31478318	31478318	8553170	5	56,121,157,173,274,	0,664,18469,28962,29889,
#Partially deleted in new
chrX	31729685	31836783	chrX:31729685-31836783	0	-	31774165	31836783	789624	3	63,233,66,	0,44274,107032,
#Partially deleted in new
chrX	31932115	33211554	chrX:31932115-33211554	0	-	31932115	31932115	8553170	5	112,176,148,62,273,	0,36223,284800,1088023,1279166,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	32102064	32102176	chrX:32102064-32102176	7	+	32102064	32102064	16724991	1	112,	0,
#Deleted in new
chrX	32205901	32206738	chrX:32205901-32206738	7	+	32205901	32205901	16724991	1	837,	0,
#Deleted in new
chrX	32342630	32348510	chrX:32342630-32348510	0	-	32342841	32348510	789624	4	220,153,138,105,	0,503,3312,5775,
#Partially deleted in new
chrX	32364680	33211312	chrX:32364680-33211312	0	-	32364680	33211312	789624	4	30,180,62,31,	0,339,655458,846601,
#Partially deleted in new
chrX	32364680	33211312	chrX:32364680-33211312	0	-	32364680	33211312	789624	3	30,62,31,	0,655458,846601,
#Partially deleted in new
chrX	32516595	33339441	chrX:32516595-33339441	1	-	32517956	33339265	789624	18	1536,176,180,108,102,120,151,182,189,129,182,119,173,93,78,93,62,183,	0,28563,49106,56934,57149,79161,97707,127536,128368,181274,182516,292897,299872,306699,328187,333132,503543,822663,
#Partially deleted in new
chrX	32573591	32816553	chrX:32573591-32816553	0	-	32573591	32573591	8553170	3	46,102,86,	0,153,242876,
#Partially deleted in new
chrX	32573610	32849802	chrX:32573610-32849802	0	-	32573610	32849802	789624	5	27,102,93,78,75,	0,134,249684,271172,276117,
#Deleted in new
chrX	32583655	32583752	chrX:32583655-32583752	3	-	32583655	32583655	5263520	1	97,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	32641473	32641559	chrX:32641473-32641559	3	-	32641473	32641473	5263520	1	86,	0,
#Partially deleted in new
chrX	32754939	32756400	chrX:32754939-32756400	3	+	32754939	32754939	8553170	2	50,243,	0,1218,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	32849727	33129077	chrX:32849727-33129077	0	-	32849727	32849727	8553170	5	93,140,62,27,49,	0,110480,170411,236173,279301,
#Partially deleted in new
chrX	33020185	33128427	chrX:33020185-33128427	0	-	33020185	33020185	8553170	2	15,365,	0,107877,
#Deleted in new
chrX	33041394	33041721	chrX:33041394-33041721	7	+	33041394	33041394	16724991	1	327,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	33159194	33211432	chrX:33159194-33211432	0	-	33159194	33159194	8553170	2	403,151,	0,52087,
#Partially deleted in new
chrX	33410943	33412173	chrX:33410943-33412173	7	+	33410943	33410943	16724991	1	1230,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	33726507	33942280	chrX:33726507-33942280	3	+	33726507	33726507	8553170	3	128,101,266,	0,127107,215507,
#Partially deleted in new
chrX	34129755	34132311	chrX:34129755-34132311	3	-	34129902	34132278	789624	1	2556,	0,
#Partially deleted in new
chrX	34129757	34132314	chrX:34129757-34132314	1	-	34129902	34132278	789624	2	991,1527,	0,1030,
#Partially deleted in new
chrX	34147035	34147586	chrX:34147035-34147586	7	+	34147035	34147035	16724991	1	551,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	34206724	34415537	chrX:34206724-34415537	3	-	34206724	34206724	8553170	3	93,76,357,	0,5435,208456,
#Partially deleted in new
chrX	34387721	34388464	chrX:34387721-34388464	7	+	34387721	34387721	16724991	1	743,	0,
#Deleted in new
chrX	34516919	34517358	chrX:34516919-34517358	7	+	34516919	34516919	16724991	1	439,	0,
#Partially deleted in new
chrX	34627063	34657288	chrX:34627063-34657288	3	-	34630312	34657029	789624	3	3428,141,485,	0,12183,29740,
#Deleted in new
chrX	34717439	34717992	chrX:34717439-34717992	7	-	34717439	34717439	16724991	1	553,	0,
#Deleted in new
chrX	34768326	34768688	chrX:34768326-34768688	7	-	34768326	34768326	16724991	1	362,	0,
#Partially deleted in new
chrX	34942795	34944915	chrX:34942795-34944915	3	+	34942831	34944769	789624	1	2120,	0,
#Deleted in new
chrX	35058926	35059974	chrX:35058926-35059974	7	+	35058926	35058926	16724991	1	1048,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	35594172	35594273	chrX:35594172-35594273	3	+	35594172	35594172	8553170	1	101,	0,
#Deleted in new
chrX	35626141	35627064	chrX:35626141-35627064	7	+	35626141	35626141	16724991	1	923,	0,
#Deleted in new
chrX	35710910	35711942	chrX:35710910-35711942	7	+	35710910	35710910	16724991	1	1032,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	35741599	35744582	chrX:35741599-35744582	7	+	35741599	35741599	16724991	1	2983,	0,
#Deleted in new
chrX	35761498	35762479	chrX:35761498-35762479	7	+	35761498	35761498	16724991	1	981,	0,
#Partially deleted in new
chrX	35798341	35803735	chrX:35798341-35803735	1	+	35802196	35803171	789624	3	77,54,1605,	0,2979,3789,
#Partially deleted in new
chrX	35798341	35803735	chrX:35798341-35803735	1	+	35802196	35803171	789624	2	77,1605,	0,3789,
#Partially deleted in new
chrX	35798341	35803735	chrX:35798341-35803735	3	+	35802196	35803171	789624	2	213,1605,	0,3789,
#Partially deleted in new
chrX	35798341	35803735	chrX:35798341-35803735	1	+	35800538	35803171	789624	3	77,52,1605,	0,2175,3789,
#Partially deleted in new
chrX	35798790	35803735	chrX:35798790-35803735	1	+	35802196	35803171	789624	2	62,1605,	0,3340,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	35864857	35869631	chrX:35864857-35869631	7	+	35864857	35864857	16724991	1	4774,	0,
#Partially deleted in new
chrX	35919733	35990147	chrX:35919733-35990147	3	+	35919799	35989536	789624	16	315,152,116,139,229,161,128,236,190,214,156,187,97,217,242,829,	0,6283,21549,28580,31397,32069,33858,36227,46831,47885,51034,51852,52135,55413,55938,69585,
#Partially deleted in new
chrX	35919733	36385319	chrX:35919733-36385319	1	+	35919799	36385006	789624	64	315,152,116,139,229,161,128,236,190,214,156,187,97,217,242,131,123,132,78,145,95,139,95,160,196,210,101,147,226,225,82,129,193,98,117,135,116,151,89,78,71,146,115,227,154,197,144,174,112,144,98,176,108,112,105,157,99,160,95,153,172,162,169,523,	0,6283,21549,28580,31397,32069,33858,36227,46831,47885,51034,51852,52135,55413,55938,69585,72087,73456,77578,80549,81879,95040,111519,115961,119250,127120,145909,152091,153405,165580,179059,180017,184765,218224,218614,225485,229374,239692,240947,259611,268886,270317,280645,281540,285223,308894,316200,316952,331599,360753,365895,379243,381338,384115,387038,391099,399475,428395,430304,433795,441596,447232,459616,465063,
#Partially deleted in new
chrX	35919780	35990152	chrX:35919780-35990152	0	+	35919799	35975255	789624	16	268,152,116,139,229,161,128,236,190,214,156,187,97,119,242,834,	0,6236,21502,28533,31350,32022,33811,36180,46784,47838,50987,51805,52088,55464,55891,69538,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	36021938	36022045	chrX:36021938-36022045	3	-	36021938	36021938	8553170	1	107,	0,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrX	36035790	36145070	chrX:36035790-36145070	0	+	36035790	36035790	8553170	13	64,196,210,101,147,226,225,82,129,193,98,117,510,	0,3193,11063,29852,36034,37348,49523,63002,63960,68708,102167,102557,108770,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	36065660	36144809	chrX:36065660-36144809	1	+	36065700	36144809	789624	10	83,147,226,225,82,129,193,98,117,249,	0,6164,7478,19653,33132,34090,38838,72297,72687,78900,
#Partially deleted in new
chrX	36211095	36211635	chrX:36211095-36211635	7	+	36211095	36211095	16724991	1	540,	0,
#Partially deleted in new
chrX	36361325	36379803	chrX:36361325-36379803	0	+	36361325	36361325	8553170	3	176,162,454,	0,5640,18024,
#Partially deleted in new
chrX	36361329	36379446	chrX:36361329-36379446	0	+	36361329	36379446	789624	2	172,97,	0,18020,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	36365625	36440292	chrX:36365625-36440292	3	-	36365625	36365625	789624	8	177,177,103,35,57,441,106,765,	0,2295,13756,48289,63360,65404,66676,73902,
#Deleted in new
chrX	36374792	36375183	chrX:36374792-36375183	7	-	36374792	36374792	16724991	1	391,	0,
#Deleted in new
chrX	36719917	36720221	chrX:36719917-36720221	7	+	36719917	36719917	16724991	1	304,	0,
#Deleted in new
chrX	36794499	36795460	chrX:36794499-36795460	7	-	36794499	36794499	16724991	2	385,174,	0,787,
#Deleted in new
chrX	36957912	36958139	chrX:36957912-36958139	7	+	36957912	36957912	16724991	1	227,	0,
#Deleted in new
chrX	36962195	36963425	chrX:36962195-36963425	7	-	36962195	36962195	16724991	1	1230,	0,
#Deleted in new
chrX	36985522	36986093	chrX:36985522-36986093	7	-	36985522	36985522	16724991	1	571,	0,
#Deleted in new
chrX	37008396	37011666	chrX:37008396-37011666	3	+	37008410	37011518	789624	1	3270,	0,
#Deleted in new
chrX	37043022	37043571	chrX:37043022-37043571	7	-	37043022	37043022	16724991	1	549,	0,
#Partially deleted in new
chrX	37077850	37078401	chrX:37077850-37078401	7	-	37077850	37077850	16724991	1	551,	0,
#Partially deleted in new
chrX	37291167	37292227	chrX:37291167-37292227	7	+	37291167	37291167	16724991	2	521,93,	0,967,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	37349274	37457295	chrX:37349274-37457295	3	+	37406249	37453621	789624	4	121,51,161,4160,	0,56934,76565,103861,
#Partially deleted in new
chrX	37349308	37453647	chrX:37349308-37453647	0	+	37349308	37349308	8553170	3	87,51,512,	0,56900,103827,
#Partially deleted in new
chrX	37349329	38687674	chrX:37349329-38687674	3	+	37406249	38687667	789624	9	66,51,161,189,75,96,156,84,76,	0,56879,76510,1316791,1322046,1324891,1326375,1331874,1338269,
#Partially deleted in new
chrX	37349329	37453411	chrX:37349329-37453411	0	+	37406249	37453411	789624	4	140,51,161,276,	0,56879,76510,103806,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	37349329	37457292	chrX:37349329-37457292	1	+	37406249	37453621	789624	5	140,91,51,161,4157,	0,37269,56879,76510,103806,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	37349329	37457292	chrX:37349329-37457292	1	+	37406249	37453621	789624	4	140,51,161,4157,	0,56879,76510,103806,
#Partially deleted in new
chrX	37349363	37453308	chrX:37349363-37453308	0	+	37406249	37453308	789624	5	106,91,51,161,173,	0,37235,56845,76476,103772,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	37349371	37457289	chrX:37349371-37457289	1	+	37406249	37453621	789624	5	24,91,51,161,4154,	0,37227,56837,76468,103764,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	37349378	37442224	chrX:37349378-37442224	1	+	37406249	37440868	789624	4	17,51,161,1434,	0,56830,76461,91412,
#Partially deleted in new
chrX	37425751	37453646	chrX:37425751-37453646	0	+	37425751	37425751	8553170	2	249,511,	0,27384,
#Deleted in new
chrX	37441522	37442068	chrX:37441522-37442068	7	+	37441522	37441522	16724991	1	546,	0,
#Deleted in new
chrX	37492020	37492548	chrX:37492020-37492548	7	+	37492020	37492020	16724991	1	528,	0,
#Deleted in new
chrX	37505309	37505860	chrX:37505309-37505860	7	+	37505309	37505309	16724991	1	551,	0,
#Partially deleted in new
chrX	37541076	37545262	chrX:37541076-37545262	7	-	37541076	37541076	16724991	2	3118,172,	0,4014,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	37571568	37684463	chrX:37571568-37684463	1	+	37571870	37668431	789624	6	875,124,198,208,83,8810,	0,84119,87893,95713,96799,104085,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	37571568	37668431	chrX:37571568-37668431	1	+	37571870	37668431	789624	5	875,124,198,208,64,	0,84119,87893,95713,96799,
#Partially deleted in new
chrX	37571651	37677394	chrX:37571651-37677394	3	+	37571870	37675813	789624	5	792,124,198,208,1741,	0,84036,87810,95630,104002,
#Partially deleted in new
chrX	37685755	37732130	chrX:37685755-37732130	3	+	37685961	37728462	789624	3	451,263,4495,	0,8530,41880,
#Deleted in new
chrX	37700039	37700277	chrX:37700039-37700277	7	+	37700039	37700039	16724991	1	238,	0,
#Partially deleted in new
chrX	37780010	37813461	chrX:37780010-37813461	3	+	37780077	37810917	0	13	112,96,111,85,146,191,130,93,254,163,147,125,2671,	0,2077,3479,11964,13654,15940,18944,21245,23866,24995,26376,29556,30780,
#Partially deleted in new
chrX	37798219	37804079	chrX:37798219-37804079	0	+	37798219	37798219	8553170	4	99,130,93,203,	0,735,3036,5657,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	37836756	37847514	chrX:37836756-37847514	1	-	37837213	37847510	789624	6	603,39,78,124,42,34,	0,3856,4271,5025,9560,10724,
#Partially deleted in new
chrX	37838835	37847637	chrX:37838835-37847637	3	-	37840574	37847510	789624	5	1816,78,124,42,157,	0,2192,2946,7481,8645,
#Partially deleted in new
chrX	37840542	37847408	chrX:37840542-37847408	1	-	37840574	37847090	789624	5	109,78,124,42,366,	0,485,1239,5774,6500,
#Partially deleted in new
chrX	37906146	37949405	chrX:37906146-37949405	3	+	37906146	37906146	8553170	3	463,108,139,	0,33435,43120,
#Deleted in new
chrX	37945883	37946775	chrX:37945883-37946775	7	+	37945883	37945883	16724991	1	892,	0,
#Deleted in new
chrX	37990816	37991317	chrX:37990816-37991317	3	+	37990839	37991193	789624	1	501,	0,
#Deleted in new
chrX	37994251	37994918	chrX:37994251-37994918	3	+	37994343	37994790	8553170	1	667,	0,
#Partially deleted in new
chrX	38006581	38128816	chrX:38006581-38128816	3	+	38033889	38126730	789624	17	87,475,210,116,109,135,142,130,101,93,179,100,162,109,136,209,2229,	0,26952,47631,65465,67008,69985,82864,87713,89552,95760,100011,102018,103739,113776,115498,118716,120006,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	38023894	38023986	chrX:38023894-38023986	3	-	38023894	38023894	5263520	1	92,	0,
#Partially deleted in new
chrX	38033533	38128819	chrX:38033533-38128819	1	+	38033889	38126730	789624	17	475,210,116,109,135,142,130,101,93,66,179,100,162,109,136,209,2232,	0,20679,38513,40056,43033,55912,60761,62600,68808,69492,73059,75066,76787,86824,88546,91764,93054,
#Partially deleted in new
chrX	38149335	38220924	chrX:38149335-38220924	1	-	38149710	38220792	789624	9	559,122,134,180,122,127,192,60,229,	0,5126,7560,10681,11597,15433,24824,28949,71360,
#Partially deleted in new
chrX	38149335	38220924	chrX:38149335-38220924	1	-	38149843	38220792	789624	9	559,134,180,122,127,177,192,60,229,	0,7560,10681,11597,15433,22545,24824,28949,71360,
#Partially deleted in new
chrX	38149335	38220924	chrX:38149335-38220924	1	-	38149710	38220792	789624	9	559,122,134,180,122,127,177,192,229,	0,5126,7560,10681,11597,15433,22545,24824,71360,
#Partially deleted in new
chrX	38149338	38220899	chrX:38149338-38220899	3	-	38149710	38220792	789624	10	556,122,134,180,122,127,177,192,60,204,	0,5123,7557,10678,11594,15430,22542,24821,28946,71357,
#Partially deleted in new
chrX	38149350	38160098	chrX:38149350-38160098	0	-	38149350	38149350	8553170	3	544,134,82,	0,7545,10666,
#Partially deleted in new
chrX	38149630	38154581	chrX:38149630-38154581	0	-	38149630	38149630	8553170	3	264,85,120,	0,4317,4831,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	38221390	38223667	chrX:38221390-38223667	3	+	38221390	38221390	8553170	2	409,246,	0,2031,
#Partially deleted in new
chrX	38269162	38327564	chrX:38269162-38327564	3	-	38269625	38327367	0	19	670,92,58,186,152,181,66,92,169,186,125,156,159,150,159,63,93,126,225,	0,4223,5926,7424,17931,18698,21796,22230,28121,29793,32084,35472,41452,48153,49666,51864,53690,54236,58177,
#Partially deleted in new
chrX	38269169	38327509	chrX:38269169-38327509	1	-	38269625	38327367	0	19	663,92,58,186,152,181,66,92,169,186,125,156,159,150,159,63,93,126,170,	0,4216,5919,7417,17924,18691,21789,22223,28114,29786,32077,35465,41445,48146,49659,51857,53683,54229,58170,
#Partially deleted in new
chrX	38269170	38327535	chrX:38269170-38327535	1	-	38269625	38327367	0	18	662,92,58,186,948,66,92,169,186,125,156,159,150,159,63,93,126,196,	0,4215,5918,7416,17923,21788,22222,28113,29785,32076,35464,41444,48145,49658,51856,53682,54228,58169,
#Partially deleted in new
chrX	38269342	38273942	chrX:38269342-38273942	0	-	38269342	38269342	8553170	2	490,557,	0,4043,
#Partially deleted in new
chrX	38269348	38327422	chrX:38269348-38327422	0	-	38279169	38327367	0	20	484,92,58,186,39,152,181,66,92,169,186,125,156,159,150,159,63,93,126,83,	0,4037,5740,7238,9818,17745,18512,21610,22044,27935,29607,31898,35286,41266,47967,49480,51678,53504,54050,57991,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chrX	38269401	38326952	chrX:38269401-38326952	0	-	38269401	38269401	8553170	18	431,279,92,58,186,66,92,169,186,125,159,150,159,63,93,126,163,275,	0,2909,3984,5687,7185,21557,21991,27882,29554,31845,41213,47914,49427,51625,53451,53997,56371,57276,
#Partially deleted in new
chrX	38269401	38327515	chrX:38269401-38327515	1	-	38269625	38327367	789624	16	431,92,58,186,66,92,169,125,156,159,150,159,63,93,126,176,	0,3984,5687,7185,21557,21991,27882,31845,35233,41213,47914,49427,51625,53451,53997,57938,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chrX	38269413	38327527	chrX:38269413-38327527	0	-	38272475	38327367	789624	18	419,279,92,58,186,66,92,169,186,125,156,159,150,159,63,93,126,188,	0,2897,3972,5675,7173,21545,21979,27870,29542,31833,35221,41201,47902,49415,51613,53439,53985,57926,
#Partially deleted in new
chrX	38269496	38327535	chrX:38269496-38327535	1	-	38269625	38327367	0	18	336,92,58,186,152,181,66,92,169,125,156,159,150,159,63,93,126,196,	0,3889,5592,7090,17597,18364,21462,21896,27787,31750,35138,41118,47819,49332,51530,53356,53902,57843,
#Partially deleted in new
chrX	38269496	38327503	chrX:38269496-38327503	0	-	38287194	38327367	789624	18	336,92,58,186,152,66,92,169,186,125,156,159,150,159,63,93,126,164,	0,3889,5592,7090,17597,21462,21896,27787,29459,31750,35138,41118,47819,49332,51530,53356,53902,57843,
#Partially deleted in new
chrX	38269519	38327506	chrX:38269519-38327506	0	-	38290995	38327367	0	16	313,92,58,186,66,169,186,125,156,159,150,159,63,93,126,167,	0,3866,5569,7067,21439,27764,29436,31727,35115,41095,47796,49309,51507,53333,53879,57820,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chrX	38269526	38327528	chrX:38269526-38327528	0	-	38296091	38327367	789624	21	306,92,58,186,152,177,66,92,160,169,186,125,60,156,159,150,159,63,93,126,189,	0,3859,5562,7060,17567,18338,21432,21866,26458,27757,29429,31720,33086,35108,41088,47789,49302,51500,53326,53872,57813,
#Partially deleted in new
chrX	38273429	38304772	chrX:38273429-38304772	0	-	38273429	38304772	789624	10	48,58,186,177,66,92,169,186,125,138,	0,1659,3157,14435,17529,17963,23854,25526,27817,31205,
#Partially deleted in new
chrX	38284407	38327544	chrX:38284407-38327544	1	-	38285539	38327367	0	15	2838,181,66,92,169,186,125,156,159,150,159,63,93,126,205,	0,3453,6551,6985,12876,14548,16839,20227,26207,32908,34421,36619,38445,38991,42932,
#Partially deleted in new
chrX	38284407	38327509	chrX:38284407-38327509	1	-	38285539	38327367	0	15	2838,181,66,92,169,186,125,156,159,150,159,63,93,126,170,	0,3453,6551,6985,12876,14548,16839,20227,26207,32908,34421,36619,38445,38991,42932,
#Partially deleted in new
chrX	38297307	38304831	chrX:38297307-38304831	0	-	38297307	38297307	8553170	4	145,186,125,197,	0,1648,3939,7327,
#Partially deleted in new
chrX	38298330	38301371	chrX:38298330-38301371	0	-	38298369	38301371	789624	3	117,186,125,	0,625,2916,
#Partially deleted in new
chrX	38298969	38327515	chrX:38298969-38327515	0	-	38298969	38327367	789624	9	172,125,156,159,150,159,63,126,176,	0,2277,5665,11645,18346,19859,22057,24429,28370,
#Partially deleted in new
chrX	38303600	38327544	chrX:38303600-38327544	1	-	38303770	38327367	789624	9	214,156,159,150,159,63,93,126,205,	0,1034,7014,13715,15228,17426,19252,19798,23739,
#Partially deleted in new
chrX	38304699	38327528	chrX:38304699-38327528	0	-	38317858	38327367	789624	9	91,159,150,83,159,63,93,126,189,	0,5915,12616,13111,14129,16327,18153,18699,22640,
#Deleted in new
chrX	38308111	38308241	chrX:38308111-38308241	3	-	38308111	38308111	8553170	1	130,	0,
#Deleted in new
chrX	38317245	38318990	chrX:38317245-38318990	0	-	38317245	38317245	8553170	2	220,162,	0,1583,
#Partially deleted in new
chrX	38352544	38421450	chrX:38352544-38421450	3	+	38352696	38421082	0	10	229,139,82,88,154,123,54,150,138,428,	0,14746,17251,28797,48730,51073,56197,56331,59317,68478,
#Partially deleted in new
chrX	38352585	38421067	chrX:38352585-38421067	0	+	38352696	38373690	789624	11	188,139,82,143,88,154,123,54,150,138,45,	0,14705,17210,21010,28756,48689,51032,56156,56290,59276,68437,
#Partially deleted in new
chrX	38352604	38403667	chrX:38352604-38403667	0	+	38352604	38352604	8553170	6	169,139,45,70,154,50,	0,14686,17191,28755,48670,51013,
#Deleted in new
chrX	38395368	38395895	chrX:38395368-38395895	7	-	38395368	38395368	16724991	1	527,	0,
#Deleted in new
chrX	38479214	38479913	chrX:38479214-38479913	7	+	38479214	38479214	16724991	1	699,	0,
#Deleted in new
chrX	38484751	38485264	chrX:38484751-38485264	7	-	38484751	38484751	16724991	1	513,	0,
#Partially deleted in new
chrX	38531922	38534174	chrX:38531922-38534174	7	-	38531922	38531922	16724991	1	2252,	0,
#Partially deleted in new
chrX	38561369	38688913	chrX:38561369-38688913	3	+	38561546	38687667	789624	8	258,189,75,96,156,84,76,975,	0,104751,110006,112851,114335,119834,126229,126569,
#Partially deleted in new
chrX	38561541	38688168	chrX:38561541-38688168	0	+	38561546	38563066	789624	10	86,184,34,189,75,96,156,84,76,230,	0,1414,4780,104579,109834,112679,114163,119662,126057,126397,
#Partially deleted in new
chrX	38561543	38688397	chrX:38561543-38688397	1	+	38561546	38687667	789624	9	84,51,189,75,96,156,84,76,459,	0,84718,104577,109832,112677,114161,119660,126055,126395,
#Partially deleted in new
chrX	38561543	38688271	chrX:38561543-38688271	0	+	38561546	38622959	789624	9	84,131,189,75,96,156,84,76,333,	0,61359,104577,109832,112677,114161,119660,126055,126395,
#Partially deleted in new
chrX	38561543	38674265	chrX:38561543-38674265	0	+	38561546	38656046	789624	5	84,160,189,75,45,	0,94452,104577,109832,112677,
#Partially deleted in new
chrX	38570682	38675816	chrX:38570682-38675816	0	+	38570682	38570682	8553170	5	264,189,75,96,112,	0,95438,100693,103538,105022,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	38608214	38608276	chrX:38608214-38608276	3	+	38608214	38608214	8553170	1	62,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	38612321	38671416	chrX:38612321-38671416	0	+	38612321	38612321	8553170	3	345,189,41,	0,53799,59054,
#Partially deleted in new
chrX	38666095	38688920	chrX:38666095-38688920	0	+	38666095	38666095	8553170	7	214,75,96,156,84,76,982,	0,5280,8125,9609,15108,21503,21843,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	38770330	38799658	chrX:38770330-38799658	3	+	38770330	38770330	8553170	5	245,107,146,108,574,	0,18757,21552,28160,28754,
#Partially deleted in new
chrX	38801431	38806528	chrX:38801431-38806528	1	+	38804946	38805498	789624	2	56,1846,	0,3251,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	38801431	38806528	chrX:38801431-38806528	3	+	38804946	38805498	789624	3	56,1879,1846,	0,1103,3251,
#Partially deleted in new
chrX	38801453	38806433	chrX:38801453-38806433	1	+	38804946	38805498	789624	3	34,104,1751,	0,2856,3229,
#Partially deleted in new
chrX	38801567	38803883	chrX:38801567-38803883	3	-	38801567	38801567	789624	2	225,151,	0,2165,
#Deleted in new
chrX	38803732	38806537	chrX:38803732-38806537	1	+	38804946	38805498	789624	2	681,1855,	0,950,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	39081179	39081285	chrX:39081179-39081285	3	-	39081179	39081179	8553170	1	106,	0,
#Partially deleted in new
chrX	39226102	39299786	chrX:39226102-39299786	3	-	39226102	39226102	8553170	3	594,170,64,	0,73260,73620,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	39304955	39327362	chrX:39304955-39327362	3	-	39304955	39304955	789624	4	1212,259,162,140,	0,2686,16813,22267,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	39305633	39327361	chrX:39305633-39327361	0	-	39305633	39305633	8553170	2	534,139,	0,21589,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	39367284	39391774	chrX:39367284-39391774	3	-	39367284	39367284	789624	6	139,79,204,121,176,161,	0,228,9202,9577,11766,24329,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	39367288	39379226	chrX:39367288-39379226	0	-	39367288	39367288	8553170	5	303,59,204,121,176,	0,4503,9198,9573,11762,
#Partially deleted in new
chrX	39661215	39661321	chrX:39661215-39661321	3	+	39661215	39661215	5263520	1	106,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	39786523	39786823	chrX:39786523-39786823	3	-	39786523	39786523	8553170	1	300,	0,
#Deleted in new
chrX	39787131	39788136	chrX:39787131-39788136	7	-	39787131	39787131	16724991	1	1005,	0,
#Deleted in new
chrX	39791579	39791904	chrX:39791579-39791904	7	-	39791579	39791579	16724991	1	325,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	39837535	39848358	chrX:39837535-39848358	3	-	39837535	39837535	8553170	2	1745,231,	0,10592,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	39837560	39837613	chrX:39837560-39837613	3	+	39837560	39837560	5263520	1	53,	0,
#Deleted in new
chrX	39865423	39865888	chrX:39865423-39865888	7	+	39865423	39865423	16724991	1	465,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	39908308	39914419	chrX:39908308-39914419	3	+	39908308	39908308	8553170	2	102,1228,	0,4883,
#Deleted in new
chrX	40009275	40012182	chrX:40009275-40012182	3	+	40009275	40009275	8553170	2	526,2165,	0,742,
#Partially deleted in new
chrX	40049814	40068120	chrX:40049814-40068120	1	-	40049915	40064468	789624	11	177,288,157,78,146,167,255,326,243,264,129,	0,2298,4071,4441,5553,7340,12324,12931,13793,14521,18177,
#Partially deleted in new
chrX	40049814	40064549	chrX:40049814-40064549	0	-	40049974	40064549	789624	10	177,182,157,78,146,167,255,326,243,214,	0,2404,4071,4441,5553,7340,12324,12931,13793,14521,
#Partially deleted in new
chrX	40051245	40177329	chrX:40051245-40177329	1	-	40052108	40077929	0	14	1155,157,78,146,167,255,326,243,264,187,2832,79,126,323,	0,2640,3010,4122,5909,10893,11500,12362,13090,19727,21103,25208,26598,125761,
#Partially deleted in new
chrX	40051245	40097403	chrX:40051245-40097403	1	-	40052108	40077929	0	15	1155,157,78,146,167,255,326,243,264,187,54,2832,79,126,189,	0,2640,3010,4122,5909,10893,11500,12362,13090,19727,20391,21103,25208,26598,45969,
#Partially deleted in new
chrX	40051247	40177329	chrX:40051247-40177329	3	-	40052108	40077929	0	15	1153,157,78,146,167,255,326,243,264,187,54,2832,79,126,323,	0,2638,3008,4120,5907,10891,11498,12360,13088,19725,20389,21101,25206,26596,125759,
#Partially deleted in new
chrX	40051247	40097403	chrX:40051247-40097403	1	-	40052108	40077929	0	15	1153,157,78,146,167,255,326,345,264,187,54,2832,79,126,189,	0,2638,3008,4120,5907,10891,11498,12360,13088,19725,20389,21101,25206,26596,45967,
#Partially deleted in new
chrX	40051254	40062937	chrX:40051254-40062937	0	-	40053881	40062937	789624	7	1146,205,78,146,167,255,192,	0,2583,3001,4113,5900,10884,11491,
#Partially deleted in new
chrX	40051256	40063002	chrX:40051256-40063002	0	-	40052356	40063002	789624	5	1144,146,167,255,257,	0,4111,5898,10882,11489,
#Partially deleted in new
chrX	40062954	40177320	chrX:40062954-40177320	0	-	40062954	40077929	789624	9	117,243,264,187,54,2832,79,126,314,	0,653,1381,8018,8682,9394,13499,14889,114052,
#Partially deleted in new
chrX	40071905	40077969	chrX:40071905-40077969	0	-	40071905	40071905	8553170	3	3275,79,126,	0,4548,5938,
#Partially deleted in new
chrX	40071943	40077957	chrX:40071943-40077957	1	-	40072330	40076962	789624	2	1602,1016,	0,4998,
#Partially deleted in new
chrX	40077843	40146629	chrX:40077843-40146629	0	-	40077843	40077929	789624	2	126,162,	0,68624,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	40262916	40287720	chrX:40262916-40287720	3	+	40262916	40262916	789624	3	636,172,2192,	0,20524,22612,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	40262965	40267222	chrX:40262965-40267222	0	+	40262965	40262965	8553170	2	587,120,	0,4137,
#Deleted in new
chrX	40359182	40360726	chrX:40359182-40360726	7	-	40359182	40359182	16724991	1	1544,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	40492843	40492941	chrX:40492843-40492941	3	+	40492843	40492843	8553170	1	98,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	40514894	40515508	chrX:40514894-40515508	7	+	40514894	40514894	16724991	2	98,123,	0,491,
#Deleted in new
chrX	40535501	40535563	chrX:40535501-40535563	3	-	40535501	40535501	8553170	1	62,	0,
#Partially deleted in new
chrX	40579371	40597661	chrX:40579371-40597661	0	+	40589095	40597661	789624	6	19,41,131,132,96,135,	0,335,9614,11862,17877,18155,
#Partially deleted in new
chrX	40580874	40606848	chrX:40580874-40606848	3	+	40581065	40605755	0	9	228,131,132,96,138,54,150,120,1288,	0,8111,10359,16374,16652,17806,18717,19887,24686,
#Partially deleted in new
chrX	40580893	40606588	chrX:40580893-40606588	1	+	40581065	40605755	0	8	209,131,132,138,54,150,120,1028,	0,8092,10340,16633,17787,18698,19868,24667,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	40580899	40592502	chrX:40580899-40592502	0	+	40580899	40580899	8553170	3	203,131,1269,	0,8086,10334,
#Partially deleted in new
chrX	40580909	40606606	chrX:40580909-40606606	1	+	40591293	40605755	789624	8	193,132,96,138,54,150,120,1046,	0,10324,16339,16617,17771,18682,19852,24651,
#Partially deleted in new
chrX	40580936	40606539	chrX:40580936-40606539	0	+	40581065	40598678	789624	9	166,131,132,96,138,83,150,120,979,	0,8049,10297,16312,16590,17715,18655,19825,24624,
#Partially deleted in new
chrX	40580936	40606466	chrX:40580936-40606466	1	+	40589095	40605755	789624	9	135,131,132,96,138,54,150,120,906,	0,8049,10297,16312,16590,17744,18655,19825,24624,
#Partially deleted in new
chrX	40580939	40606618	chrX:40580939-40606618	0	+	40581065	40598977	789624	10	163,131,132,96,138,54,83,150,120,1058,	0,8046,10294,16309,16587,17741,17996,18652,19822,24621,
#Partially deleted in new
chrX	40580942	40606598	chrX:40580942-40606598	0	+	40581065	40600807	789624	9	160,131,132,96,138,54,150,113,1038,	0,8043,10291,16306,16584,17738,18649,19826,24618,
#Partially deleted in new
chrX	40580948	40605945	chrX:40580948-40605945	1	+	40581065	40605755	789624	9	154,131,132,96,138,54,93,120,385,	0,8037,10285,16300,16578,17732,18700,19813,24612,
#Partially deleted in new
chrX	40580957	40606619	chrX:40580957-40606619	1	+	40581065	40605755	789624	9	145,131,132,96,138,54,150,120,1056,	0,8028,10276,16291,16569,17723,18634,19804,24606,
#Partially deleted in new
chrX	40580959	40606010	chrX:40580959-40606010	1	+	40591293	40605755	789624	7	143,132,138,54,150,120,450,	0,10274,16567,17721,18632,19802,24601,
#Partially deleted in new
chrX	40580965	40606588	chrX:40580965-40606588	0	+	40591293	40597542	789624	8	137,132,92,138,54,150,120,1028,	0,10268,16287,16561,17715,18626,19796,24595,
#Partially deleted in new
chrX	40580969	40606024	chrX:40580969-40606024	1	+	40581065	40605755	789624	9	133,131,132,96,138,54,135,120,464,	0,8016,10264,16279,16557,17711,18637,19792,24591,
#Partially deleted in new
chrX	40580969	40606617	chrX:40580969-40606617	1	+	40591293	40605755	789624	8	133,132,96,138,54,150,120,1054,	0,10264,16279,16557,17711,18622,19792,24594,
#Partially deleted in new
chrX	40580969	40606635	chrX:40580969-40606635	0	+	40581065	40597564	789624	9	133,131,132,96,136,54,150,120,1075,	0,8016,10264,16279,16559,17711,18622,19792,24591,
#Partially deleted in new
chrX	40580969	40606619	chrX:40580969-40606619	1	+	40591293	40605755	789624	6	133,132,54,150,120,1059,	0,10264,17711,18622,19792,24591,
#Partially deleted in new
chrX	40580981	40605945	chrX:40580981-40605945	1	+	40581065	40605755	789624	7	121,131,132,54,150,120,385,	0,8004,10252,17699,18610,19780,24579,
#Partially deleted in new
chrX	40580981	40605594	chrX:40580981-40605594	0	+	40591293	40598977	789624	8	121,132,138,54,83,150,120,34,	0,10252,16545,17699,17954,18610,19780,24579,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	40580994	40592470	chrX:40580994-40592470	0	+	40580994	40580994	8553170	2	108,3485,	0,7991,
#Partially deleted in new
chrX	40580997	40606637	chrX:40580997-40606637	1	+	40581065	40605755	789624	8	105,131,132,138,54,150,120,1074,	0,7988,10236,16529,17683,18594,19764,24566,
#Partially deleted in new
chrX	40581035	40605946	chrX:40581035-40605946	1	+	40581065	40600832	789624	9	67,131,132,96,138,54,150,100,386,	0,7950,10198,16213,16491,17645,18556,19746,24525,
#Partially deleted in new
chrX	40588997	40605955	chrX:40588997-40605955	0	+	40588997	40605755	789624	7	119,132,96,138,54,150,395,	0,2236,8251,8529,9683,10594,16563,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	40591258	40606588	chrX:40591258-40606588	0	+	40591258	40591258	8553170	4	107,54,1290,1028,	0,7422,8333,14302,
#Partially deleted in new
chrX	40591269	40605815	chrX:40591269-40605815	0	+	40591269	40605755	789624	4	96,150,120,255,	0,8322,9492,14291,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	40595853	40599650	chrX:40595853-40599650	0	+	40595853	40595853	8553170	3	94,983,59,	0,1898,3738,
#Partially deleted in new
chrX	40596917	40598734	chrX:40596917-40598734	0	+	40596917	40596917	8553170	3	427,138,54,	0,609,1763,
#Partially deleted in new
chrX	40597336	40599978	chrX:40597336-40599978	0	+	40597336	40597336	8553170	4	8,138,54,387,	0,190,1344,2255,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	40597566	40599697	chrX:40597566-40599697	0	+	40597566	40597566	8553170	1	2131,	0,
#Partially deleted in new
chrX	40597570	40600929	chrX:40597570-40600929	0	+	40597570	40597570	8553170	4	94,54,150,168,	0,1110,2021,3191,
#Partially deleted in new
chrX	40597617	40599697	chrX:40597617-40599697	0	+	40597617	40597617	8553170	2	47,1017,	0,1063,
#Partially deleted in new
chrX	40600777	40605887	chrX:40600777-40605887	0	+	40600777	40605583	789624	3	104,103,327,	0,2559,4783,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	40605120	40605664	chrX:40605120-40605664	0	+	40605120	40605120	8553170	1	544,	0,
#Deleted in new
chrX	40623565	40624136	chrX:40623565-40624136	3	+	40623565	40623976	789624	1	571,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	40626920	40647554	chrX:40626920-40647554	1	-	40630614	40639122	789624	5	3853,180,150,164,548,	0,9612,10086,12088,20086,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	40629032	40647547	chrX:40629032-40647547	3	-	40630614	40647520	789624	7	1130,160,180,150,120,135,243,	0,1581,7500,7974,9976,17974,18272,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	40629936	40647521	chrX:40629936-40647521	1	-	40630614	40639122	789624	7	226,160,180,150,1312,135,217,	0,677,6596,7070,9072,17070,17368,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chrX	40648305	40735531	chrX:40648305-40735531	3	-	40651805	40735412	789624	31	3574,193,126,108,180,236,183,132,112,141,270,153,92,147,161,77,135,195,160,79,126,112,151,133,108,129,130,174,106,27,334,	0,6058,6629,10921,11122,14619,16001,18414,23555,26915,31558,32452,33546,34297,34530,40148,43877,44402,48718,52859,55138,61042,61673,62863,63880,64608,65472,66231,78440,81013,86892,
#Partially deleted in new
chrX	40649542	40659334	chrX:40649542-40659334	0	-	40649631	40659334	789624	4	130,193,126,108,	0,4821,5392,9684,
#Partially deleted in new
chrX	40653871	40664451	chrX:40653871-40664451	0	-	40654355	40664451	789624	6	685,126,108,180,236,145,	0,1063,5355,5556,9053,10435,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	40659226	40659819	chrX:40659226-40659819	0	-	40659226	40659226	8553170	2	108,392,	0,201,
#Partially deleted in new
chrX	40675220	40682913	chrX:40675220-40682913	0	-	40675220	40675220	8553170	5	141,153,96,147,78,	0,5537,6627,7382,7615,
#Partially deleted in new
chrX	40713831	40735858	chrX:40713831-40735858	0	-	40713831	40713831	8553170	5	76,174,106,27,137,	0,705,12914,15487,21890,
#Deleted in new
chrX	40713877	40715051	chrX:40713877-40715051	0	-	40713877	40713877	8553170	2	30,515,	0,659,
#Partially deleted in new
chrX	40726454	40735298	chrX:40726454-40735298	0	-	40726454	40726454	8553170	3	397,27,101,	0,2864,8743,
#Partially deleted in new
chrX	40726527	40729540	chrX:40726527-40729540	0	-	40726527	40726527	8553170	2	324,222,	0,2791,
#Partially deleted in new
chrX	40735399	40738701	chrX:40735399-40738701	3	+	40735399	40735399	8553170	2	391,509,	0,2793,
#Deleted in new
chrX	40758482	40759050	chrX:40758482-40759050	7	+	40758482	40758482	16724991	1	568,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	40760103	40761270	chrX:40760103-40761270	7	-	40760103	40760103	16724991	1	1167,	0,
#Partially deleted in new
chrX	40831843	40832562	chrX:40831843-40832562	7	-	40831843	40831843	16724991	1	719,	0,
#Deleted in new
chrX	40834484	40836005	chrX:40834484-40836005	7	+	40834484	40834484	16724991	1	1521,	0,
#Partially deleted in new
chrX	40890646	40891537	chrX:40890646-40891537	7	-	40890646	40890646	16724991	1	891,	0,
#Deleted in new
chrX	40907986	40908391	chrX:40907986-40908391	7	+	40907986	40907986	16724991	1	405,	0,
#Deleted in new
chrX	40934981	40935864	chrX:40934981-40935864	7	-	40934981	40934981	16724991	1	883,	0,
#Deleted in new
chrX	41076998	41077750	chrX:41076998-41077750	7	+	41076998	41076998	16724991	1	752,	0,
#Boundary problem: need 45, got 0, diff 45, mapped 0.0
chrX	41085634	41236579	chrX:41085634-41236579	3	+	41123628	41232524	0	45	475,254,146,80,113,219,116,252,139,153,105,207,137,134,88,343,96,212,241,150,121,131,279,126,126,167,109,147,147,223,221,191,174,142,754,124,226,130,186,221,89,157,261,96,4193,	0,37836,43365,45822,49090,51169,55021,55331,55658,57656,58887,62734,65286,67313,77155,80237,81847,82372,84360,84835,86203,98363,98762,100882,102357,103674,110616,110957,111729,112893,115425,119668,124874,128933,130264,131585,132737,133467,137582,139107,139414,143618,143932,144866,146752,
#Partially deleted in new
chrX	41085634	41232597	chrX:41085634-41232597	1	+	41123628	41232524	0	45	475,254,146,80,113,219,116,252,139,153,105,207,137,134,88,343,96,212,241,150,121,131,279,126,126,167,109,147,147,223,221,191,174,142,754,124,226,130,186,221,89,157,213,96,211,	0,37836,43365,45822,49090,51169,55021,55331,55658,57656,58887,62734,65286,67313,77155,80237,81847,82372,84360,84835,86203,98363,98762,100882,102357,103674,110616,110957,111729,112893,115425,119668,124874,128933,130264,131585,132737,133467,137582,139107,139414,143618,143932,144866,146752,
#Deleted in new
chrX	41167144	41168242	chrX:41167144-41168242	0	+	41167144	41167144	8553170	2	433,236,	0,862,
#Deleted in new
chrX	41183993	41184740	chrX:41183993-41184740	0	+	41183993	41183993	8553170	2	135,344,	0,403,
#Deleted in new
chrX	41188065	41189922	chrX:41188065-41189922	0	+	41188065	41188065	8553170	2	52,614,	0,1243,
#Partially deleted in new
chrX	41195904	41198571	chrX:41195904-41198571	0	+	41195904	41195904	8553170	5	101,109,147,147,44,	0,346,687,1459,2623,
#Partially deleted in new
chrX	41205058	41210654	chrX:41205058-41210654	0	+	41205058	41205058	8553170	2	435,146,	0,5450,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	41228982	41229896	chrX:41228982-41229896	0	+	41228982	41228982	8553170	2	427,330,	0,584,
#Deleted in new
chrX	41275738	41276778	chrX:41275738-41276778	3	+	41275738	41275738	789624	2	145,690,	0,350,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	41292797	41292916	chrX:41292797-41292916	7	+	41292797	41292797	16724991	1	119,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	41316487	41316589	chrX:41316487-41316589	3	+	41316487	41316487	8553170	1	102,	0,
#Deleted in new
chrX	41322600	41323111	chrX:41322600-41323111	7	-	41322600	41322600	16724991	1	511,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chrX	41333283	41351668	chrX:41333283-41351668	3	+	41334252	41347719	0	17	1014,58,48,133,159,100,136,86,99,161,145,145,182,118,154,140,4029,	0,4124,5752,8200,9211,9453,9932,10453,10746,10955,11896,12120,12945,13221,13575,14028,14356,
#Partially deleted in new
chrX	41333347	41341494	chrX:41333347-41341494	0	+	41333347	41333347	8553170	4	436,58,48,11,	0,4060,5688,8136,
#Partially deleted in new
chrX	41333347	41364472	chrX:41333347-41364472	1	+	41334252	41364342	789624	19	950,58,48,133,159,100,136,86,99,161,145,145,182,118,154,140,56,168,199,	0,4060,5688,8136,9147,9389,9868,10389,10682,10891,11832,12056,12881,13157,13511,13964,14512,24485,30926,
#Partially deleted in new
chrX	41333347	41364472	chrX:41333347-41364472	1	+	41334252	41364287	789624	17	950,58,48,133,159,100,136,86,99,161,145,145,182,118,154,140,199,	0,4060,5688,8136,9147,9389,9868,10389,10682,10891,11832,12056,12881,13157,13511,13964,30926,
#Partially deleted in new
chrX	41333347	41350287	chrX:41333347-41350287	1	+	41334252	41347719	0	18	352,172,58,48,133,159,100,136,86,99,161,145,145,182,118,154,140,2648,	0,778,4060,5688,8136,9147,9389,9868,10389,10682,10891,11832,12056,12881,13157,13511,13964,14292,
#Partially deleted in new
chrX	41333347	41364472	chrX:41333347-41364472	0	+	41334252	41347719	0	19	950,58,48,133,159,100,136,86,99,161,145,145,182,118,154,140,276,168,199,	0,4060,5688,8136,9147,9389,9868,10389,10682,10891,11832,12056,12881,13157,13511,13964,14292,24485,30926,
#Partially deleted in new
chrX	41333347	41364472	chrX:41333347-41364472	0	+	41334252	41347719	0	18	950,58,48,133,159,100,136,86,99,161,145,145,182,118,154,140,276,199,	0,4060,5688,8136,9147,9389,9868,10389,10682,10891,11832,12056,12881,13157,13511,13964,14292,30926,
#Partially deleted in new
chrX	41333347	41364472	chrX:41333347-41364472	0	+	41334252	41357867	789624	18	950,58,48,133,159,100,136,86,99,161,145,145,182,118,154,140,107,199,	0,4060,5688,8136,9147,9389,9868,10389,10682,10891,11832,12056,12881,13157,13511,13964,24485,30926,
#Partially deleted in new
chrX	41333347	41364472	chrX:41333347-41364472	0	+	41334252	41357867	789624	18	950,58,48,133,159,100,136,86,99,161,145,145,182,118,154,140,168,199,	0,4060,5688,8136,9147,9389,9868,10389,10682,10891,11832,12056,12881,13157,13511,13964,24485,30926,
#Partially deleted in new
chrX	41333348	41341596	chrX:41333348-41341596	0	+	41333348	41333348	8553170	4	351,58,48,113,	0,4059,5687,8135,
#Partially deleted in new
chrX	41333397	41364472	chrX:41333397-41364472	0	+	41334252	41347719	0	19	900,58,48,133,159,100,136,86,99,161,145,145,182,118,154,140,276,158,199,	0,4010,5638,8086,9097,9339,9818,10339,10632,10841,11782,12006,12831,13107,13461,13914,14242,24435,30876,
#Partially deleted in new
chrX	41333912	41350224	chrX:41333912-41350224	1	+	41334252	41347719	0	16	385,58,133,159,100,136,86,99,161,145,145,182,118,154,140,2585,	0,3495,7571,8582,8824,9303,9824,10117,10326,11267,11491,12316,12592,12946,13399,13727,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	41334011	41338780	chrX:41334011-41338780	1	+	41334252	41337710	789624	3	286,58,1090,	0,3396,3679,
#Partially deleted in new
chrX	41334161	41350274	chrX:41334161-41350274	1	+	41334252	41347719	789624	17	136,58,45,133,159,100,136,86,99,161,145,145,182,118,154,140,2635,	0,3246,4877,7322,8333,8575,9054,9575,9868,10077,11018,11242,12067,12343,12697,13150,13478,
#Partially deleted in new
chrX	41334161	41349860	chrX:41334161-41349860	1	+	41334252	41347719	789624	16	136,58,48,133,159,100,136,86,161,145,145,182,118,154,140,2221,	0,3246,4874,7322,8333,8575,9054,9575,10077,11018,11242,12067,12343,12697,13150,13478,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	41334161	41339604	chrX:41334161-41339604	0	+	41334161	41334161	789624	2	136,2197,	0,3246,
#Partially deleted in new
chrX	41334161	41342506	chrX:41334161-41342506	0	+	41334252	41341961	789624	6	136,58,48,133,98,12,	0,3246,4874,7322,7787,8333,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	41334161	41344531	chrX:41334161-41344531	0	+	41334161	41334161	8553170	9	136,58,133,159,100,136,86,99,293,	0,3246,7322,8333,8575,9054,9575,9868,10077,
#Partially deleted in new
chrX	41334161	41349886	chrX:41334161-41349886	0	+	41334161	41334161	8553170	16	136,58,48,133,342,136,86,99,161,145,145,182,118,154,137,2247,	0,3246,4874,7322,8333,9054,9575,9868,10077,11018,11242,12067,12343,12697,13153,13478,
#Partially deleted in new
chrX	41334161	41349886	chrX:41334161-41349886	0	+	41334161	41334161	8553170	15	136,58,48,1170,100,86,99,161,145,145,182,118,154,140,2247,	0,3246,4874,7322,8575,9575,9868,10077,11018,11242,12067,12343,12697,13150,13478,
#Partially deleted in new
chrX	41334161	41350243	chrX:41334161-41350243	0	+	41334252	41343223	789624	17	136,58,48,133,159,100,131,86,99,161,145,145,182,118,154,137,2604,	0,3246,4874,7322,8333,8575,9059,9575,9868,10077,11018,11242,12067,12343,12697,13153,13478,
#Partially deleted in new
chrX	41334161	41350265	chrX:41334161-41350265	1	+	41334252	41347719	789624	17	136,58,45,133,159,100,136,86,99,161,145,145,182,118,154,137,2626,	0,3246,4877,7322,8333,8575,9054,9575,9868,10077,11018,11242,12067,12343,12697,13153,13478,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chrX	41334161	41349886	chrX:41334161-41349886	1	+	41334252	41347719	789624	17	136,58,45,133,159,100,136,86,99,326,145,145,182,118,154,140,2247,	0,3246,4877,7322,8333,8575,9054,9575,9868,10077,11018,11242,12067,12343,12697,13150,13478,
#Partially deleted in new
chrX	41334161	41350168	chrX:41334161-41350168	0	+	41334161	41334161	8553170	16	136,58,48,133,159,100,136,86,99,161,369,182,118,154,137,2529,	0,3246,4874,7322,8333,8575,9054,9575,9868,10077,11018,12067,12343,12697,13153,13478,
#Partially deleted in new
chrX	41334161	41349884	chrX:41334161-41349884	1	+	41334252	41347719	789624	17	136,58,48,133,159,100,136,86,99,161,145,145,182,118,154,140,2245,	0,3246,4874,7322,8333,8575,9054,9575,9868,10077,11018,11242,12067,12343,12697,13153,13478,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chrX	41334161	41349886	chrX:41334161-41349886	0	+	41334161	41334161	8553170	16	136,1676,133,159,100,136,86,99,161,145,145,182,118,154,140,2247,	0,3246,7322,8333,8575,9054,9575,9868,10077,11018,11242,12067,12343,12697,13150,13478,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chrX	41334161	41349891	chrX:41334161-41349891	0	+	41334252	41337710	789624	17	136,58,1393,133,159,100,136,86,99,161,145,145,182,118,154,137,2252,	0,3246,3529,7322,8333,8575,9054,9575,9868,10077,11018,11242,12067,12343,12697,13153,13478,
#Partially deleted in new
chrX	41334161	41350258	chrX:41334161-41350258	0	+	41334161	41334161	8553170	16	136,58,48,133,159,100,136,86,99,161,369,182,118,154,140,2619,	0,3246,4874,7322,8333,8575,9054,9575,9868,10077,11018,12067,12343,12697,13150,13478,
#Partially deleted in new
chrX	41334161	41349897	chrX:41334161-41349897	0	+	41334161	41334161	8553170	15	136,58,48,1170,100,136,392,161,145,145,182,118,154,137,2258,	0,3246,4874,7322,8575,9054,9575,10077,11018,11242,12067,12343,12697,13153,13478,
#Partially deleted in new
chrX	41334161	41349867	chrX:41334161-41349867	0	+	41334252	41346508	789624	17	136,58,48,133,159,100,136,86,99,161,145,145,182,129,154,140,2228,	0,3246,4874,7322,8333,8575,9054,9575,9868,10077,11018,11242,12067,12332,12697,13150,13478,
#Partially deleted in new
chrX	41334161	41349886	chrX:41334161-41349886	1	+	41334252	41347468	789624	16	136,58,48,133,159,100,136,86,99,161,145,145,182,118,154,2575,	0,3246,4874,7322,8333,8575,9054,9575,9868,10077,11018,11242,12067,12343,12697,13150,
#Partially deleted in new
chrX	41334161	41350254	chrX:41334161-41350254	0	+	41334161	41334161	8553170	16	136,58,48,1170,100,136,86,99,161,145,145,182,118,154,140,2615,	0,3246,4874,7322,8575,9054,9575,9868,10077,11018,11242,12067,12343,12697,13150,13478,
#Partially deleted in new
chrX	41334161	41349739	chrX:41334161-41349739	0	+	41334161	41334161	8553170	14	136,58,48,133,159,1392,161,145,145,182,118,154,140,2100,	0,3246,4874,7322,8333,8575,10077,11018,11242,12067,12343,12697,13150,13478,
#Partially deleted in new
chrX	41334161	41350205	chrX:41334161-41350205	0	+	41334161	41334161	8553170	16	136,58,48,133,342,136,86,99,161,145,145,182,118,154,140,2566,	0,3246,4874,7322,8333,9054,9575,9868,10077,11018,11242,12067,12343,12697,13150,13478,
#Partially deleted in new
chrX	41334161	41341869	chrX:41334161-41341869	0	+	41334161	41334161	8553170	2	136,386,	0,7322,
#Partially deleted in new
chrX	41334163	41350247	chrX:41334163-41350247	0	+	41334252	41343775	789624	16	134,58,48,133,159,100,86,99,161,145,145,182,118,154,137,2608,	0,3244,4872,7320,8331,8573,9573,9866,10075,11016,11240,12065,12341,12695,13151,13476,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chrX	41334163	41351668	chrX:41334163-41351668	0	+	41334252	41340670	789624	18	134,58,48,179,133,159,100,136,86,99,161,145,145,182,118,154,137,4029,	0,3244,4872,6472,7320,8331,8573,9052,9573,9866,10075,11016,11240,12065,12341,12695,13151,13476,
#Partially deleted in new
chrX	41334174	41350209	chrX:41334174-41350209	1	+	41334252	41347719	789624	17	123,58,48,133,159,100,136,86,99,161,145,145,182,118,154,137,2570,	0,3233,4861,7309,8320,8562,9041,9562,9855,10064,11005,11229,12054,12330,12684,13140,13465,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	41334244	41341543	chrX:41334244-41341543	0	+	41334252	41337710	789624	5	53,58,1222,48,60,	0,3163,3446,4791,7239,
#Partially deleted in new
chrX	41334256	41343409	chrX:41334256-41343409	0	+	41334256	41334256	8553170	4	41,133,342,194,	0,7227,8238,8959,
#Partially deleted in new
chrX	41334590	41346551	chrX:41334590-41346551	0	+	41343230	41344255	789624	13	179,58,48,133,159,100,136,99,161,145,145,182,47,	0,2817,4445,6893,7904,8146,8625,9439,9648,10589,10813,11638,11914,
#Partially deleted in new
chrX	41334605	41349886	chrX:41334605-41349886	1	+	41336156	41347719	789624	18	164,77,58,48,133,159,100,136,86,99,161,145,145,182,118,154,137,2247,	0,1477,2802,4430,6878,7889,8131,8610,9131,9424,9633,10574,10798,11623,11899,12253,12709,13034,
#Partially deleted in new
chrX	41334609	41342542	chrX:41334609-41342542	0	+	41336156	41342542	789624	6	206,77,58,48,133,48,	0,1473,2798,4426,6874,7885,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	41334609	41336738	chrX:41334609-41336738	0	+	41334609	41334609	8553170	1	2129,	0,
#Partially deleted in new
chrX	41334609	41349850	chrX:41334609-41349850	1	+	41340780	41347719	789624	18	206,58,48,179,133,159,100,136,86,99,161,145,145,182,118,154,137,2211,	0,2798,4426,6026,6874,7885,8127,8606,9127,9420,9629,10570,10794,11619,11895,12249,12705,13030,
#Partially deleted in new
chrX	41334612	41349891	chrX:41334612-41349891	1	+	41343230	41347719	789624	17	157,58,48,133,159,100,136,86,99,161,145,145,182,118,154,140,2252,	0,2795,4423,6871,7882,8124,8603,9124,9417,9626,10567,10791,11616,11892,12246,12699,13027,
#Partially deleted in new
chrX	41334613	41342744	chrX:41334613-41342744	0	+	41334613	41334613	8553170	6	202,58,48,133,159,8,	0,2794,4422,6870,7881,8123,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chrX	41334620	41349886	chrX:41334620-41349886	0	+	41334620	41334620	8553170	17	195,58,1393,133,159,100,136,86,99,161,145,145,182,118,154,140,2247,	0,2787,3070,6863,7874,8116,8595,9116,9409,9618,10559,10783,11608,11884,12238,12691,13019,
#Partially deleted in new
chrX	41334633	41349694	chrX:41334633-41349694	1	+	41340780	41347719	789624	18	136,58,48,179,133,159,100,136,86,99,161,145,145,182,118,154,137,2055,	0,2774,4402,6002,6850,7861,8103,8582,9103,9396,9605,10546,10770,11595,11871,12225,12681,13006,
#Partially deleted in new
chrX	41335122	41348158	chrX:41335122-41348158	1	+	41343230	41347719	789624	17	86,58,48,133,159,100,136,86,99,161,145,145,182,118,154,140,519,	0,2285,3913,6361,7372,7614,8093,8614,8907,9116,10057,10281,11106,11382,11736,12189,12517,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	41339909	41342836	chrX:41339909-41342836	0	+	41339909	41339909	8553170	2	1707,342,	0,2585,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	41339942	41349884	chrX:41339942-41349884	0	+	41339942	41339942	8553170	9	4186,161,145,145,182,118,154,137,2245,	0,4296,5237,5461,6286,6562,6916,7372,7697,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrX	41339947	41349886	chrX:41339947-41349886	0	+	41339947	41339947	8553170	13	1669,159,100,136,86,99,161,369,182,118,154,137,2247,	0,2547,2789,3268,3789,4082,4291,5232,6281,6557,6911,7367,7692,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	41340005	41348583	chrX:41340005-41348583	0	+	41340005	41340005	8553170	12	2831,136,86,99,161,145,145,182,118,154,140,944,	0,3210,3731,4024,4233,5174,5398,6223,6499,6853,7306,7634,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chrX	41340008	41350195	chrX:41340008-41350195	1	+	41343230	41347719	789624	14	1608,159,100,136,86,99,161,145,145,182,118,154,140,2556,	0,2486,2728,3207,3728,4021,4230,5171,5395,6220,6496,6850,7303,7631,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrX	41340011	41350255	chrX:41340011-41350255	0	+	41340011	41340011	8553170	13	2642,100,136,86,99,161,145,145,182,118,154,140,2616,	0,2725,3204,3725,4018,4227,5168,5392,6217,6493,6847,7300,7628,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	41340021	41349851	chrX:41340021-41349851	0	+	41340021	41340021	8553170	9	2815,913,161,145,145,182,118,593,2212,	0,3194,4217,5158,5382,6207,6483,6837,7618,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chrX	41341069	41350163	chrX:41341069-41350163	1	+	41343230	41347719	789624	14	547,159,100,136,86,99,161,145,145,182,118,154,137,2524,	0,1425,1667,2146,2667,2960,3169,4110,4334,5159,5435,5789,6245,6570,
#Partially deleted in new
chrX	41341319	41347782	chrX:41341319-41347782	0	+	41341319	41341319	8553170	13	1334,100,136,86,99,161,145,145,182,118,154,137,143,	0,1417,1896,2417,2710,2919,3860,4084,4909,5185,5539,5995,6320,
#Deleted in new
chrX	41341504	41343441	chrX:41341504-41343441	0	+	41341504	41341504	8553170	2	112,947,	0,990,
#Partially deleted in new
chrX	41342319	41349889	chrX:41342319-41349889	0	+	41342319	41342319	8553170	12	334,100,136,392,161,145,145,182,118,154,140,2250,	0,417,896,1417,1919,2860,3084,3909,4185,4539,4992,5320,
#Partially deleted in new
chrX	41342639	41350205	chrX:41342639-41350205	0	+	41342639	41342639	8553170	11	712,86,99,161,145,145,182,118,154,140,2566,	0,1097,1390,1599,2540,2764,3589,3865,4219,4672,5000,
#Deleted in new
chrX	41342736	41344109	chrX:41342736-41344109	0	+	41342736	41343333	789624	4	100,63,86,80,	0,552,1000,1293,
#Partially deleted in new
chrX	41343023	41350200	chrX:41343023-41350200	0	+	41343023	41343023	8553170	11	328,86,99,161,145,145,182,118,154,137,2561,	0,713,1006,1215,2156,2380,3205,3481,3835,4291,4616,
#Partially deleted in new
chrX	41343988	41347694	chrX:41343988-41347694	0	+	41343988	41343988	8553170	8	140,161,145,145,394,154,137,55,	0,250,1191,1415,2240,2870,3326,3651,
#Partially deleted in new
chrX	41344190	41346259	chrX:41344190-41346259	0	+	41344190	41344190	8553170	4	209,145,145,31,	0,989,1213,2038,
#Partially deleted in new
chrX	41345485	41364463	chrX:41345485-41364463	0	+	41345485	41364287	789624	6	63,182,118,154,137,190,	0,743,1019,1373,1829,18788,
#Partially deleted in new
chrX	41345494	41349881	chrX:41345494-41349881	0	+	41345494	41345494	8553170	4	54,182,118,3023,	0,734,1010,1364,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	41345575	41345876	chrX:41345575-41345876	3	-	41345575	41345575	8553170	1	301,	0,
#Deleted in new
chrX	41346319	41348138	chrX:41346319-41348138	0	+	41346319	41347924	789624	5	91,118,154,140,279,	0,185,539,992,1540,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	41447433	41475710	chrX:41447433-41475710	3	+	41447889	41474899	789624	2	493,2220,	0,26057,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	41447459	41475652	chrX:41447459-41475652	1	+	41447889	41474899	789624	3	57,78,2162,	0,389,26031,
#Partially deleted in new
chrX	41472180	41473709	chrX:41472180-41473709	0	+	41472180	41472180	8553170	2	275,219,	0,1310,
#Partially deleted in new
chrX	41472263	41472653	chrX:41472263-41472653	7	-	41472263	41472263	16724991	1	390,	0,
#Partially deleted in new
chrX	41514933	41923169	chrX:41514933-41923169	1	-	41520419	41922988	0	25	5663,84,203,81,81,116,197,36,69,86,79,189,81,78,122,100,84,123,176,103,73,78,106,113,240,	0,9017,16073,19772,19959,27757,38785,40666,44845,46625,54734,63406,71973,74581,94970,111670,121644,145505,150343,156494,224450,230590,272244,338181,407996,
#Partially deleted in new
chrX	41514950	41923007	chrX:41514950-41923007	1	-	41520419	41922988	0	26	5646,84,203,81,66,116,197,36,69,86,79,189,81,78,122,18,100,84,123,176,103,73,78,106,113,78,	0,9000,16056,19755,19942,27740,38768,40649,44828,46608,54717,63389,71956,74564,94953,107666,111653,121627,145488,150326,156477,224433,230573,272227,338164,407979,
#Partially deleted in new
chrX	41517307	41923161	chrX:41517307-41923161	1	-	41520419	41922988	789624	26	3289,84,203,81,81,116,197,36,69,69,86,79,189,81,78,122,100,84,123,176,103,73,78,106,113,232,	0,6643,13699,17398,17585,25383,36411,38292,39724,42471,44251,52360,61032,69599,72207,92596,109296,119270,143131,147969,154120,222076,228216,269870,335807,405622,
#Partially deleted in new
chrX	41519210	41923015	chrX:41519210-41923015	1	-	41520419	41922988	0	27	1386,84,203,81,66,116,197,36,69,69,86,79,189,81,78,122,18,100,84,123,176,103,73,78,106,113,86,	0,4740,11796,15495,15682,23480,34508,36389,37821,40568,42348,50457,59129,67696,70304,90693,103406,107393,117367,141228,146066,152217,220173,226313,267967,333904,403719,
#Partially deleted in new
chrX	41519220	41923048	chrX:41519220-41923048	1	-	41520419	41922988	789624	26	1376,84,203,81,66,116,197,36,69,86,79,189,81,78,122,18,100,84,123,176,103,73,78,106,131,119,	0,4730,11786,15485,15672,23470,34498,36379,40558,42338,50447,59119,67686,70294,90683,103396,107383,117357,141218,146056,152207,220163,226303,267957,333876,403709,
#Partially deleted in new
chrX	41519226	41590082	chrX:41519226-41590082	1	-	41520419	41589592	789624	14	1370,84,203,81,81,116,197,36,69,86,79,189,81,568,	0,4724,11780,15479,15666,23464,34492,36373,40552,42332,50441,59113,67680,70288,
#Partially deleted in new
chrX	41519233	41556235	chrX:41519233-41556235	0	-	41519233	41519233	8553170	8	1363,84,203,81,66,116,197,636,	0,4717,11773,15472,15659,23457,34485,36366,
#Partially deleted in new
chrX	41519236	41923171	chrX:41519236-41923171	1	-	41520419	41922988	789624	25	1360,84,203,81,81,116,197,36,69,86,79,189,81,78,122,100,84,123,176,103,73,78,106,131,242,	0,4714,11770,15469,15656,23454,34482,36363,40542,42322,50431,59103,67670,70278,90667,107367,117341,141202,146040,152191,220147,226287,267941,333860,403693,
#Partially deleted in new
chrX	41519264	41923475	chrX:41519264-41923475	1	-	41520419	41922988	0	27	1332,84,203,81,81,116,197,36,69,69,86,79,189,81,78,122,18,100,84,123,176,103,73,78,106,113,546,	0,4686,11742,15441,15628,23426,34454,36335,37767,40514,42294,50403,59075,67642,70250,90639,103352,107339,117313,141174,146012,152163,220119,226259,267913,333850,403665,
#Partially deleted in new
chrX	41519294	41923195	chrX:41519294-41923195	1	-	41520419	41922988	789624	27	1302,84,203,81,66,116,197,36,69,69,86,79,189,81,78,122,18,100,84,123,176,103,73,78,106,131,266,	0,4656,11712,15411,15598,23396,34424,36305,37737,40484,42264,50373,59045,67612,70220,90609,103322,107309,117283,141144,145982,152133,220089,226229,267883,333802,403635,
#Partially deleted in new
chrX	41519477	41923161	chrX:41519477-41923161	1	-	41520419	41922988	789624	24	1119,84,203,81,66,116,197,69,86,79,189,81,78,122,100,84,123,176,103,73,78,106,113,232,	0,4473,11529,15228,15415,23213,34241,40301,42081,50190,58862,67429,70037,90426,107126,117100,140961,145799,151950,219906,226046,267700,333637,403452,
#Partially deleted in new
chrX	41519548	41923144	chrX:41519548-41923144	1	-	41520419	41922988	789624	25	1048,84,203,81,81,116,197,69,69,86,79,189,81,78,122,100,84,123,176,103,73,78,106,113,215,	0,4402,11458,15157,15344,23142,34170,37483,40230,42010,50119,58791,67358,69966,90355,107055,117029,140890,145728,151879,219835,225975,267629,333566,403381,
#Partially deleted in new
chrX	41519553	41923645	chrX:41519553-41923645	3	-	41520419	41922988	0	26	1043,84,203,81,66,116,197,69,69,86,79,189,81,78,122,18,100,84,123,176,103,73,78,106,113,716,	0,4397,11453,15152,15339,23137,34165,37478,40225,42005,50114,58786,67353,69961,90350,103063,107050,117024,140885,145723,151874,219830,225970,267624,333561,403376,
#Partially deleted in new
chrX	41519607	41586951	chrX:41519607-41586951	0	-	41520419	41586951	789624	15	989,84,120,203,81,66,116,197,36,69,69,86,79,189,45,	0,4343,9921,11399,15098,15285,23083,34111,35992,37424,40171,41951,50060,58732,67299,
#Partially deleted in new
chrX	41519896	41923030	chrX:41519896-41923030	1	-	41520419	41922988	789624	25	700,84,203,81,66,116,197,36,69,86,79,189,81,78,122,100,84,123,176,103,73,78,106,113,101,	0,4054,11110,14809,14996,22794,33822,35703,39882,41662,49771,58443,67010,69618,90007,106707,116681,140542,145380,151531,219487,225627,267281,333218,403033,
#Deleted in new
chrX	41520005	41524713	chrX:41520005-41524713	0	-	41520005	41520005	8553170	2	591,763,	0,3945,
#Deleted in new
chrX	41520035	41522336	chrX:41520035-41522336	3	+	41520035	41520035	8553170	2	331,184,	0,2117,
#Partially deleted in new
chrX	41520332	41534900	chrX:41520332-41534900	0	-	41520419	41534900	789624	6	264,27,84,203,81,8,	0,2666,3618,10674,14373,14560,
#Partially deleted in new
chrX	41531183	41665847	chrX:41531183-41665847	0	-	41531183	41665429	789624	17	26,81,81,116,197,69,86,79,189,81,78,122,100,84,123,176,111,	0,3522,3709,11507,22535,28595,30375,38484,47156,55723,58331,78720,95420,105394,129255,134093,134553,
#Partially deleted in new
chrX	41534705	41588520	chrX:41534705-41588520	0	-	41534705	41534705	8553170	10	81,81,116,197,36,69,86,79,189,1614,	0,187,7985,19013,20894,25073,26853,34962,43634,52201,
#Partially deleted in new
chrX	41552587	41578453	chrX:41552587-41578453	0	-	41552587	41552587	8553170	7	195,197,36,69,86,79,114,	0,1131,3012,7191,8971,17080,25752,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	41558195	41562882	chrX:41558195-41562882	0	-	41558195	41558195	8553170	2	1652,1324,	0,3363,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	41570922	41571029	chrX:41570922-41571029	3	-	41570922	41570922	8553170	1	107,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	41583940	41745593	chrX:41583940-41745593	0	-	41583940	41583940	8553170	10	3047,78,122,100,84,123,176,103,73,70,	0,5574,25963,42663,52637,76498,81336,87487,155443,161583,
#Partially deleted in new
chrX	41609984	41665766	chrX:41609984-41665766	0	-	41609984	41665429	789624	7	41,18,100,84,123,176,30,	0,12632,16619,26593,50454,55292,55752,
#Partially deleted in new
chrX	41626603	41923007	chrX:41626603-41923007	0	-	41745566	41922988	789624	9	100,84,123,176,103,73,78,113,78,	0,9974,33835,38673,44824,112780,118920,226511,296326,
#Partially deleted in new
chrX	41635717	41665431	chrX:41635717-41665431	0	-	41635717	41635717	8553170	4	52,84,123,155,	0,860,24721,29559,
#Partially deleted in new
chrX	41660100	41665832	chrX:41660100-41665832	1	-	41660384	41665429	789624	3	461,176,96,	0,5176,5636,
#Deleted in new
chrX	41675759	41676494	chrX:41675759-41676494	7	-	41675759	41675759	16724991	1	735,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	41683167	41683462	chrX:41683167-41683462	3	-	41683167	41683167	8553170	1	295,	0,
#Partially deleted in new
chrX	41688972	41697277	chrX:41688972-41697277	3	+	41695633	41696779	789624	3	112,93,1723,	0,770,6582,
#Partially deleted in new
chrX	41689005	41697273	chrX:41689005-41697273	1	+	41695633	41696779	789624	3	79,90,1646,	0,740,6622,
#Partially deleted in new
chrX	41689049	41696779	chrX:41689049-41696779	1	+	41695774	41696779	789624	4	35,93,123,1031,	0,693,6505,6699,
#Partially deleted in new
chrX	41689050	41697161	chrX:41689050-41697161	1	+	41695633	41696779	789624	3	34,93,1534,	0,692,6577,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	41697609	41853193	chrX:41697609-41853193	0	-	41698032	41853193	789624	5	486,73,78,106,79,	0,41774,47914,89568,155505,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	41724154	41730135	chrX:41724154-41730135	3	+	41727026	41728037	789624	3	135,71,3143,	0,2618,2838,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	41728132	41728771	chrX:41728132-41728771	0	+	41728132	41728132	8553170	2	379,124,	0,515,
#Partially deleted in new
chrX	41743552	41923012	chrX:41743552-41923012	1	-	41743669	41922988	789624	5	184,78,106,113,83,	0,1971,43625,109562,179377,
#Partially deleted in new
chrX	41745496	41922947	chrX:41745496-41922947	0	-	41745496	41745496	8553170	4	105,106,113,18,	0,41681,107618,177433,
#Deleted in new
chrX	41748221	41748608	chrX:41748221-41748608	7	+	41748221	41748221	16724991	1	387,	0,
#Partially deleted in new
chrX	41786809	41922982	chrX:41786809-41922982	0	-	41786809	41786809	8553170	3	474,113,53,	0,66305,136120,
#Partially deleted in new
chrX	41790191	41790250	chrX:41790191-41790250	7	-	41790191	41790191	16724991	1	59,	0,
#Deleted in new
chrX	41919253	41919349	chrX:41919253-41919349	3	-	41919253	41919253	8553170	1	96,	0,
#Partially deleted in new
chrX	42047882	42054836	chrX:42047882-42054836	3	-	42047882	42047882	8553170	2	225,253,	0,6701,
#Deleted in new
chrX	42098753	42099173	chrX:42098753-42099173	7	-	42098753	42098753	16724991	1	420,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	42139424	42139530	chrX:42139424-42139530	3	-	42139424	42139424	8553170	1	106,	0,
#Deleted in new
chrX	42150510	42150744	chrX:42150510-42150744	7	-	42150510	42150510	16724991	1	234,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	42285129	42285925	chrX:42285129-42285925	3	+	42285129	42285129	8553170	1	796,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	42456577	42699385	chrX:42456577-42699385	1	+	42456577	42456577	8553170	4	144,153,175,241,	0,124641,125936,242567,
#Deleted in new
chrX	42777367	42778247	chrX:42777367-42778247	3	-	42777470	42778079	789624	1	880,	0,
#Partially deleted in new
chrX	43000173	43000396	chrX:43000173-43000396	7	+	43000173	43000173	16724991	1	223,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	43176993	43226598	chrX:43176993-43226598	3	+	43176993	43176993	789624	6	212,132,173,60,82,1569,	0,13598,19203,20322,46322,48036,
#Deleted in new
chrX	43278124	43279658	chrX:43278124-43279658	7	-	43278124	43278124	16724991	1	1534,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	43279559	43438657	chrX:43279559-43438657	3	+	43279559	43279559	8553170	8	87,42,97,110,69,131,82,323,	0,281,8595,115725,125438,126326,126909,158775,
#Partially deleted in new
chrX	43407664	43408559	chrX:43407664-43408559	7	-	43407664	43407664	16724991	1	895,	0,
#Partially deleted in new
chrX	43654906	43746824	chrX:43654906-43746824	1	+	43711964	43744513	0	16	1508,108,95,138,105,92,142,150,160,97,54,58,98,112,63,2458,	0,2955,28606,38384,56965,57798,73266,76334,76787,77792,81320,85774,87043,88887,89202,89460,
#Partially deleted in new
chrX	43656218	43746821	chrX:43656218-43746821	3	+	43656341	43744513	0	15	196,95,138,105,92,142,150,160,97,54,58,98,112,63,2455,	0,27294,37072,55653,56486,71954,75022,75475,76480,80008,84462,85731,87575,87890,88148,
#Partially deleted in new
chrX	43656301	43731382	chrX:43656301-43731382	0	+	43656301	43656301	8553170	8	113,108,95,138,105,92,142,142,	0,1560,27211,36989,55570,56403,71871,74939,
#Deleted in new
chrX	43743703	43744658	chrX:43743703-43744658	0	+	43743703	43743703	8553170	3	202,63,292,	0,405,663,
#Partially deleted in new
chrX	43766610	43882447	chrX:43766610-43882447	3	-	43767465	43882299	0	15	1008,63,112,98,58,54,97,160,150,142,92,105,138,95,194,	0,2043,2696,8564,12071,13731,14837,26808,29128,30514,35561,36689,72257,77059,115643,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	43797211	43882435	chrX:43797211-43882435	0	-	43797211	43797211	8553170	7	55,92,105,138,95,190,182,	0,4960,6088,41656,46458,47244,85042,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	43843799	43882303	chrX:43843799-43882303	0	-	43843799	43843799	8553170	3	135,140,50,	0,706,38454,
#Partially deleted in new
chrX	43948775	43973504	chrX:43948775-43973504	3	-	43949798	43958645	0	3	1251,381,201,	0,9696,24528,
#Partially deleted in new
chrX	43948775	43973390	chrX:43948775-43973390	1	-	43949798	43958645	0	3	1251,381,87,	0,9696,24528,
#Partially deleted in new
chrX	43948790	43973395	chrX:43948790-43973395	1	-	43949798	43958645	0	4	1236,381,95,92,	0,9681,17717,24513,
#Partially deleted in new
chrX	43949681	43973386	chrX:43949681-43973386	0	-	43949681	43949681	8553170	3	345,135,83,	0,9036,23622,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	43949731	43969620	chrX:43949731-43969620	3	+	43949731	43949731	8553170	5	349,84,33,110,161,	0,3587,4784,11053,19728,
#Deleted in new
chrX	44029331	44030921	chrX:44029331-44030921	7	+	44029331	44029331	16724991	1	1590,	0,
#Partially deleted in new
chrX	44147881	44225756	chrX:44147881-44225756	0	-	44147881	44147881	8553170	5	1015,106,93,198,72,	0,16040,28410,30485,77803,
#Partially deleted in new
chrX	44148664	44343672	chrX:44148664-44343672	3	-	44148794	44343588	0	15	232,106,93,198,131,197,143,169,139,114,252,224,151,189,126,	0,15257,27627,29702,80984,83816,86640,93456,99607,100138,101529,112410,124021,163903,194882,
#Deleted in new
chrX	44283915	44286246	chrX:44283915-44286246	7	+	44283915	44283915	16724991	1	2331,	0,
#Deleted in new
chrX	44309313	44310476	chrX:44309313-44310476	7	-	44309313	44309313	16724991	1	1163,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	44401602	44401704	chrX:44401602-44401704	3	+	44401602	44401602	8553170	1	102,	0,
#Partially deleted in new
chrX	44466690	44468955	chrX:44466690-44468955	7	+	44466690	44466690	16724991	4	58,184,184,1143,	0,267,770,1122,
#Partially deleted in new
chrX	44476026	44477422	chrX:44476026-44477422	7	-	44476026	44476026	16724991	2	596,461,	0,935,
#Partially deleted in new
chrX	44523638	44543001	chrX:44523638-44543001	3	-	44524197	44542832	0	5	637,129,76,157,197,	0,3598,14828,18306,19166,
#Partially deleted in new
chrX	44523771	44542304	chrX:44523771-44542304	0	-	44523771	44523771	8553170	4	504,129,76,360,	0,3465,14695,18173,
#Partially deleted in new
chrX	44633691	44635232	chrX:44633691-44635232	7	+	44633691	44633691	16724991	1	1541,	0,
#Partially deleted in new
chrX	44649128	44649719	chrX:44649128-44649719	7	+	44649128	44649128	16724991	1	591,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	44741086	44741964	chrX:44741086-44741964	7	+	44741086	44741086	16724991	1	878,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	44772772	44773061	chrX:44772772-44773061	3	-	44772772	44772772	8553170	1	289,	0,
#Deleted in new
chrX	44844003	44844888	chrX:44844003-44844888	3	+	44844132	44844705	789624	1	885,	0,
#Partially deleted in new
chrX	44873176	45112598	chrX:44873176-45112598	1	+	44873623	45111411	789624	29	536,64,109,50,59,121,55,35,94,127,99,220,156,96,102,396,779,130,106,206,65,75,149,115,188,142,127,171,1217,	0,747,88107,101489,137784,147433,161754,164478,178532,180652,185829,186070,187432,188147,189470,190245,196402,203520,205223,205969,209399,209538,210283,212688,216566,217546,234233,236902,238205,
#Partially deleted in new
chrX	44873176	45112598	chrX:44873176-45112598	1	+	44873623	45111411	789624	28	536,64,109,50,59,121,55,35,94,127,99,220,96,102,396,779,130,106,206,65,75,149,115,188,142,127,171,1217,	0,747,88107,101489,137784,147433,161754,164478,178532,180652,185829,186070,188147,189470,190245,196402,203520,205223,205969,209399,209538,210283,212688,216566,217546,234233,236902,238205,
#Partially deleted in new
chrX	44873176	45112598	chrX:44873176-45112598	1	+	44873623	45107526	789624	28	536,64,109,50,59,121,55,35,94,127,99,220,156,96,396,779,130,106,206,65,75,149,115,188,110,127,171,1217,	0,747,88107,101489,137784,147433,161754,164478,178532,180652,185829,186070,187432,188147,190245,196402,203520,205223,205969,209399,209538,210283,212688,216566,217546,234233,236902,238205,
#Partially deleted in new
chrX	44873176	45112598	chrX:44873176-45112598	1	+	44873623	45111411	789624	30	536,64,109,50,59,121,55,35,94,127,99,220,135,156,96,102,396,779,130,106,206,65,75,149,115,188,142,127,171,1217,	0,747,88107,101489,137784,147433,161754,164478,178532,180652,185829,186070,186845,187432,188147,189470,190245,196402,203520,205223,205969,209399,209538,210283,212688,216566,217546,234233,236902,238205,
#Partially deleted in new
chrX	44873510	45112602	chrX:44873510-45112602	3	+	44873551	45111411	0	29	202,64,109,50,59,121,55,35,94,127,99,220,135,96,102,396,779,130,106,206,65,75,149,115,188,142,127,171,1221,	0,413,87773,101155,137450,147099,161420,164144,178198,180318,185495,185736,186511,187813,189136,189911,196068,203186,204889,205635,209065,209204,209949,212354,216232,217212,233899,236568,237871,
#Partially deleted in new
chrX	44873551	45111411	chrX:44873551-45111411	1	+	44873551	45053849	789624	19	161,64,109,50,59,121,55,35,127,99,220,96,396,779,130,94,80,171,30,	0,372,87732,101114,137409,147058,161379,164103,180277,185454,185695,187772,189870,196027,203145,204848,233905,236527,237830,
#Partially deleted in new
chrX	44873714	45020730	chrX:44873714-45020730	0	+	44873714	44873714	8553170	5	273,109,50,59,121,	0,87569,100951,137246,146895,
#Partially deleted in new
chrX	45059281	45063676	chrX:45059281-45063676	0	+	45059281	45063676	789624	4	185,135,96,255,	0,740,2042,4140,
#Partially deleted in new
chrX	45059345	45112602	chrX:45059345-45112602	0	+	45059345	45111411	789624	17	121,96,102,396,779,130,106,206,65,75,149,115,188,142,127,171,1221,	0,1978,3301,4076,10233,17351,19054,19800,23230,23369,24114,26519,30397,31377,48064,50733,52036,
#Partially deleted in new
chrX	45060056	45112602	chrX:45060056-45112602	0	+	45060056	45111411	789624	18	100,156,96,102,396,779,130,106,206,65,75,149,115,188,142,127,171,1221,	0,552,1267,2590,3365,9522,16640,18343,19089,22519,22658,23403,25808,29686,30666,47353,50022,51325,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	45082397	45083523	chrX:45082397-45083523	0	+	45082397	45082397	8553170	3	243,75,64,	0,317,1062,
#Partially deleted in new
chrX	45082585	45086225	chrX:45082585-45086225	0	+	45082585	45082585	8553170	4	55,75,149,361,	0,129,874,3279,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	45090816	45111662	chrX:45090816-45111662	0	+	45090816	45111411	789624	5	48,108,127,171,281,	0,15725,16593,19262,20565,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	45106939	45110249	chrX:45106939-45110249	0	+	45106939	45106939	8553170	2	597,171,	0,3139,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	45148373	45200901	chrX:45148373-45200901	3	-	45151651	45200826	789624	5	3619,289,174,265,308,	0,5536,9341,43377,52220,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	45149899	45191933	chrX:45149899-45191933	0	-	45149899	45149899	8553170	3	2093,172,87,	0,4010,41947,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	45162309	45200901	chrX:45162309-45200901	1	-	45164198	45200826	789624	3	1940,265,308,	0,29441,38284,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	45183250	45333557	chrX:45183250-45333557	1	+	45183250	45183250	8553170	4	179,145,109,284,	0,87346,142242,150023,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	45183250	45333917	chrX:45183250-45333917	0	+	45183250	45183250	8553170	4	94,111,109,408,	0,141857,142242,150259,
#Deleted in new
chrX	45191392	45191869	chrX:45191392-45191869	0	-	45191392	45191392	8553170	2	125,119,	0,358,
#Partially deleted in new
chrX	45320457	45325580	chrX:45320457-45325580	3	+	45320457	45320457	8553170	6	134,123,179,101,111,88,	0,1048,2752,3089,4650,5035,
#Deleted in new
chrX	45381526	45381995	chrX:45381526-45381995	7	-	45381526	45381526	16724991	1	469,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	45505387	45523644	chrX:45505387-45523644	3	+	45505387	45505387	789624	3	78,99,2037,	0,5109,16220,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	45505411	45527239	chrX:45505411-45527239	1	+	45505411	45505411	789624	4	54,99,241,2506,	0,5085,16196,19322,
#Deleted in new
chrX	45632291	45633733	chrX:45632291-45633733	7	-	45632291	45632291	16724991	1	1442,	0,
#Deleted in new
chrX	45730751	45731688	chrX:45730751-45731688	7	+	45730751	45730751	16724991	1	937,	0,
#Partially deleted in new
chrX	45745210	45770274	chrX:45745210-45770274	3	-	45745210	45745210	8553170	2	890,489,	0,24575,
#Deleted in new
chrX	45746156	45746266	chrX:45746156-45746266	3	-	45746156	45746156	5263520	1	110,	0,
#Deleted in new
chrX	45747014	45747124	chrX:45747014-45747124	3	-	45747014	45747014	5263520	1	110,	0,
#Deleted in new
chrX	45764771	45765299	chrX:45764771-45765299	3	-	45764771	45764771	8553170	1	528,	0,
#Deleted in new
chrX	45768379	45770269	chrX:45768379-45770269	1	-	45768379	45768379	8553170	2	1573,185,	0,1705,
#Partially deleted in new
chrX	45848073	45851490	chrX:45848073-45851490	3	-	45848073	45848073	789624	3	140,98,137,	0,1301,3280,
#Deleted in new
chrX	45892911	45892979	chrX:45892911-45892979	3	-	45892911	45892911	8553170	1	68,	0,
#Partially deleted in new
chrX	45913117	45913871	chrX:45913117-45913871	7	+	45913117	45913117	16724991	1	754,	0,
#Partially deleted in new
chrX	45913266	45917040	chrX:45913266-45917040	3	-	45913266	45913266	8553170	2	716,51,	0,3723,
#Partially deleted in new
chrX	45951761	45952333	chrX:45951761-45952333	7	-	45951761	45951761	16724991	1	572,	0,
#Partially deleted in new
chrX	45983364	45984364	chrX:45983364-45984364	7	+	45983364	45983364	16724991	1	1000,	0,
#Partially deleted in new
chrX	46058750	46059528	chrX:46058750-46059528	7	-	46058750	46058750	16724991	1	778,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	46073650	46073935	chrX:46073650-46073935	3	-	46073650	46073650	8553170	1	285,	0,
#Partially deleted in new
chrX	46288015	46289128	chrX:46288015-46289128	7	-	46288015	46288015	16724991	1	1113,	0,
#Partially deleted in new
chrX	46325923	46327645	chrX:46325923-46327645	3	-	46325923	46325923	789624	2	531,95,	0,1627,
#Partially deleted in new
chrX	46418449	46420079	chrX:46418449-46420079	7	-	46418449	46418449	16724991	1	1630,	0,
#Partially deleted in new
chrX	46439708	46440714	chrX:46439708-46440714	7	-	46439708	46439708	16724991	1	1006,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	46446856	46474639	chrX:46446856-46474639	1	+	46450460	46473012	789624	6	490,111,45,127,111,1890,	0,1343,3574,15891,16341,25893,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	46447291	46473669	chrX:46447291-46473669	3	+	46450460	46473012	789624	6	55,111,45,127,96,920,	0,908,3139,15456,15906,25458,
#Partially deleted in new
chrX	46447293	46472526	chrX:46447293-46472526	1	+	46450460	46471185	789624	7	53,111,45,127,111,44,502,	0,906,3137,15454,15904,23848,24731,
#Deleted in new
chrX	46447296	46448668	chrX:46447296-46448668	0	+	46447296	46447296	8553170	2	50,469,	0,903,
#Partially deleted in new
chrX	46447296	46463449	chrX:46447296-46463449	0	+	46450460	46463449	789624	5	50,111,45,127,252,	0,903,3134,15451,15901,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	46447296	46497422	chrX:46447296-46497422	1	+	46450460	46497165	789624	6	50,111,45,127,96,301,	0,903,3134,15451,15901,49825,
#Partially deleted in new
chrX	46448232	46473594	chrX:46448232-46473594	1	+	46450460	46471185	789624	6	78,45,127,111,44,842,	0,2198,14515,14965,22909,24520,
#Partially deleted in new
chrX	46454096	46457199	chrX:46454096-46457199	7	-	46454096	46454096	16724991	4	322,1273,541,163,	0,876,2328,2940,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	46497726	46545441	chrX:46497726-46545441	3	-	46499842	46542087	789624	6	3609,111,127,44,111,71,	0,30608,31056,44346,46774,47644,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	46499436	46544611	chrX:46499436-46544611	1	-	46499842	46542087	789624	5	1896,96,127,44,111,	0,28913,29346,42636,45064,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	46501301	46523618	chrX:46501301-46523618	0	-	46501301	46501301	8553170	2	34,682,	0,21635,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	46517765	46517868	chrX:46517765-46517868	3	+	46517765	46517765	8553170	1	103,	0,
#Partially deleted in new
chrX	46522992	46545420	chrX:46522992-46545420	0	-	46522992	46522992	8553170	6	133,111,127,44,111,50,	0,5342,5790,19080,21508,22378,
#Partially deleted in new
chrX	46522999	46545457	chrX:46522999-46545457	0	-	46522999	46522999	8553170	6	126,96,127,44,111,87,	0,5350,5783,19073,21501,22371,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	46527722	46529668	chrX:46527722-46529668	0	-	46527722	46527722	8553170	2	723,886,	0,1060,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	46545492	46548408	chrX:46545492-46548408	3	+	46545492	46545492	789624	2	135,1943,	0,973,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	46545510	46547881	chrX:46545510-46547881	1	+	46545510	46545510	8553170	3	117,98,457,	0,955,1914,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	46553521	46553775	chrX:46553521-46553775	3	-	46553521	46553521	8553170	1	254,	0,
#Partially deleted in new
chrX	46560927	46562749	chrX:46560927-46562749	7	-	46560927	46560927	16724991	2	70,1390,	0,432,
#Partially deleted in new
chrX	46573783	46598408	chrX:46573783-46598408	3	+	46573931	46575392	789624	2	1640,649,	0,23976,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chrX	46599251	46759172	chrX:46599251-46759172	1	-	46606951	46759029	789624	17	7952,106,83,64,60,154,112,114,89,106,142,106,113,77,78,200,468,	0,14037,21725,32334,36337,43984,49434,51858,52064,54357,62764,63286,70355,73299,80426,83084,159453,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chrX	46605317	46759055	chrX:46605317-46759055	3	-	46606951	46759029	789624	17	1886,106,83,64,60,154,112,114,89,115,130,106,113,77,78,200,351,	0,7971,15659,26268,30271,37918,43368,45792,45998,48291,56710,57220,64289,67233,74360,77018,153387,
#Partially deleted in new
chrX	46606260	46635634	chrX:46606260-46635634	0	-	46606260	46606260	8553170	6	110,296,106,83,64,46,	0,647,7028,14716,25325,29328,
#Partially deleted in new
chrX	46606294	46669686	chrX:46606294-46669686	0	-	46606294	46606294	8553170	3	76,259,80,	0,629,63312,
#Partially deleted in new
chrX	46606294	46621016	chrX:46606294-46621016	0	-	46606294	46606294	8553170	4	76,280,106,40,	0,629,6994,14682,
#Deleted in new
chrX	46646593	46647330	chrX:46646593-46647330	7	-	46646593	46646593	16724991	1	737,	0,
#Deleted in new
chrX	46684764	46685707	chrX:46684764-46685707	7	-	46684764	46684764	16724991	1	943,	0,
#Deleted in new
chrX	46725163	46725818	chrX:46725163-46725818	7	-	46725163	46725163	16724991	1	655,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	46836939	46882358	chrX:46836939-46882358	3	+	46837100	46879769	0	5	263,666,115,86,2673,	0,16536,23048,40565,42746,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	46887416	46899703	chrX:46887416-46899703	3	-	46887416	46887416	789624	4	276,87,58,100,	0,2876,7107,12187,
#Partially deleted in new
chrX	46887420	46894592	chrX:46887420-46894592	0	-	46887420	46887420	8553170	3	272,87,69,	0,2872,7103,
#Partially deleted in new
chrX	46912275	47027976	chrX:46912275-47027976	0	+	46984894	47027976	789624	6	65,57,80,158,191,85,	0,72608,73437,85844,112448,115616,
#Partially deleted in new
chrX	46912275	47061242	chrX:46912275-47061242	3	+	46984894	47059077	789624	11	65,57,80,158,191,212,168,117,471,118,3076,	0,72608,73437,85844,112448,115616,121345,126673,141882,143806,145891,
#Partially deleted in new
chrX	46912432	47061241	chrX:46912432-47061241	1	+	46984894	47059077	789624	11	287,57,80,158,191,212,168,117,471,118,3075,	0,72451,73280,85687,112291,115459,121188,126516,141725,143649,145734,
#Partially deleted in new
chrX	46912795	47024783	chrX:46912795-47024783	0	+	46984894	47024783	789624	5	137,57,80,158,60,	0,72088,72917,85324,111928,
#Partially deleted in new
chrX	47078354	47093314	chrX:47078354-47093314	3	+	47081144	47092947	0	8	355,620,178,183,216,132,155,418,	0,1962,2775,6063,11421,13323,13706,14542,
#Partially deleted in new
chrX	47078354	47093314	chrX:47078354-47093314	1	+	47081144	47092947	0	7	355,620,178,183,132,155,418,	0,1962,2775,6063,13323,13706,14542,
#Partially deleted in new
chrX	47078379	47093313	chrX:47078379-47093313	1	+	47081144	47092947	0	7	330,178,183,216,132,155,417,	0,2750,6038,11396,13298,13681,14517,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	47078424	47084961	chrX:47078424-47084961	0	+	47078424	47078424	8553170	3	285,991,544,	0,1892,5993,
#Partially deleted in new
chrX	47080858	47093310	chrX:47080858-47093310	1	+	47081144	47092947	0	7	78,178,183,216,132,155,414,	0,271,3559,8917,10819,11202,12038,
#Partially deleted in new
chrX	47084537	47093308	chrX:47084537-47093308	0	+	47084537	47084537	8553170	3	63,155,412,	0,7523,8359,
#Deleted in new
chrX	47132670	47132826	chrX:47132670-47132826	3	+	47132670	47132670	8553170	1	156,	0,
#Partially deleted in new
chrX	47142215	47145504	chrX:47142215-47145504	3	-	47142316	47144679	0	3	225,131,1032,	0,398,2257,
#Partially deleted in new
chrX	47142219	47145038	chrX:47142219-47145038	1	-	47142316	47144679	0	3	221,161,566,	0,364,2253,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chrX	47144868	47186811	chrX:47144868-47186811	3	+	47147481	47186599	0	24	617,142,184,231,70,74,87,61,177,161,98,88,187,140,118,92,165,150,66,189,75,107,130,338,	0,2488,24446,26159,28259,30150,31631,34234,34450,35011,35343,35550,36346,36638,36880,37082,37293,40186,40433,40573,40847,41196,41389,41605,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chrX	47145278	47186813	chrX:47145278-47186813	1	+	47147481	47186599	0	23	207,142,184,70,74,87,61,177,161,98,88,187,140,118,92,165,150,66,189,75,107,130,340,	0,2078,24036,27849,29740,31221,33824,34040,34601,34933,35140,35936,36228,36470,36672,36883,39776,40023,40163,40437,40786,40979,41195,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chrX	47145278	47186813	chrX:47145278-47186813	1	+	47147481	47186599	0	23	207,142,184,70,74,87,61,177,158,98,88,187,140,118,92,165,150,66,189,75,107,130,340,	0,2078,24036,27849,29740,31221,33824,34040,34601,34933,35140,35936,36228,36470,36672,36883,39776,40023,40163,40437,40786,40979,41195,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chrX	47145446	47186812	chrX:47145446-47186812	1	+	47145446	47186599	0	24	70,142,184,231,70,74,87,61,177,161,98,88,187,140,118,92,165,150,66,189,75,107,130,339,	0,1910,23868,25581,27681,29572,31053,33656,33872,34433,34765,34972,35768,36060,36302,36504,36715,39608,39855,39995,40269,40618,40811,41027,
#Partially deleted in new
chrX	47156637	47158199	chrX:47156637-47158199	7	-	47156637	47156637	16724991	2	1134,114,	0,1448,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	47175011	47181762	chrX:47175011-47181762	0	+	47175011	47175011	8553170	5	81,87,187,140,14,	0,1488,6203,6495,6737,
#Deleted in new
chrX	47179314	47181543	chrX:47179314-47181543	0	+	47179314	47179314	8553170	7	181,98,158,98,88,187,37,	0,369,565,897,1104,1900,2192,
#Partially deleted in new
chrX	47190860	47215128	chrX:47190860-47215128	3	+	47198802	47214929	0	26	90,117,59,169,135,107,91,133,98,147,177,105,81,156,166,197,65,196,75,190,89,93,192,102,101,335,	0,7942,8187,8348,8619,10033,10415,10617,11295,11497,11777,12082,12273,12680,15087,15387,18762,19067,19981,20175,21563,21910,22129,23466,23676,23933,
#Partially deleted in new
chrX	47191398	47201611	chrX:47191398-47201611	0	+	47198802	47201611	789624	8	336,117,59,169,135,107,91,134,	0,7404,7649,7810,8081,9495,9877,10079,
#Partially deleted in new
chrX	47191422	47199613	chrX:47191422-47199613	0	+	47198313	47199613	789624	6	145,47,117,59,169,134,	0,6886,7380,7625,7786,8057,
#Partially deleted in new
chrX	47193828	47201610	chrX:47193828-47201610	0	+	47198313	47201610	789624	9	196,47,117,59,169,135,107,91,133,	0,4480,4974,5219,5380,5651,7065,7447,7649,
#Partially deleted in new
chrX	47193836	47199566	chrX:47193836-47199566	0	+	47198202	47199566	789624	6	188,189,117,59,169,87,	0,4330,4966,5211,5372,5643,
#Partially deleted in new
chrX	47193841	47215128	chrX:47193841-47215128	1	+	47198802	47214929	0	26	183,117,59,169,135,107,91,133,98,147,177,105,81,156,166,197,65,196,75,190,89,93,192,102,101,335,	0,4961,5206,5367,5638,7052,7434,7636,8314,8516,8796,9101,9292,9699,12106,12406,15781,16086,17000,17194,18582,18929,19148,20485,20695,20952,
#Partially deleted in new
chrX	47197198	47200962	chrX:47197198-47200962	0	+	47198202	47200962	789624	6	1157,117,59,169,135,69,	0,1604,1849,2010,2281,3695,
#Partially deleted in new
chrX	47202692	47206664	chrX:47202692-47206664	0	+	47202692	47202692	8553170	6	122,105,81,156,36,417,	0,250,441,848,3385,3555,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	47204920	47205865	chrX:47204920-47205865	3	+	47204920	47204920	789624	1	945,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	47208561	47215126	chrX:47208561-47215126	1	+	47209340	47214929	789624	10	1126,196,75,190,89,93,192,102,101,333,	0,1366,2280,2474,3862,4209,4428,5765,5975,6232,
#Deleted in new
chrX	47217859	47222380	chrX:47217859-47222380	0	+	47217859	47217859	8553170	3	190,252,120,	0,553,4401,
#Deleted in new
chrX	47218026	47222330	chrX:47218026-47222330	0	+	47218026	47218026	8553170	3	198,252,70,	0,386,4234,
#Deleted in new
chrX	47218232	47229997	chrX:47218232-47229997	1	+	47218652	47228768	0	16	432,208,134,126,57,115,95,63,124,121,98,106,43,91,78,1267,	0,5319,6152,6385,6601,6755,7539,7732,8046,8350,8579,8761,8948,9146,10334,10498,
#Deleted in new
chrX	47218310	47223728	chrX:47218310-47223728	0	+	47223557	47223728	789624	3	354,70,177,	0,3962,5241,
#Deleted in new
chrX	47218386	47224473	chrX:47218386-47224473	0	+	47218652	47224418	789624	3	278,208,87,	0,5165,6000,
#Deleted in new
chrX	47218687	47229997	chrX:47218687-47229997	3	+	47223557	47228768	0	16	418,208,134,126,57,115,95,63,124,121,98,106,43,91,78,1267,	0,4864,5697,5930,6146,6300,7084,7277,7591,7895,8124,8306,8493,8691,9879,10043,
#Deleted in new
chrX	47218690	47224731	chrX:47218690-47224731	0	+	47223557	47224731	789624	5	415,120,208,134,114,	0,3570,4861,5694,5927,
#Deleted in new
chrX	47218709	47224740	chrX:47218709-47224740	0	+	47223557	47224740	789624	5	396,82,208,134,123,	0,3551,4842,5675,5908,
#Deleted in new
chrX	47218715	47229993	chrX:47218715-47229993	1	+	47223557	47228768	789624	17	390,53,11,134,126,57,115,95,63,124,121,98,106,43,91,78,1263,	0,4836,5033,5669,5902,6118,6272,7056,7249,7563,7867,8096,8278,8465,8663,9851,10015,
#Deleted in new
chrX	47218717	47229415	chrX:47218717-47229415	0	+	47223557	47229415	789624	12	388,208,134,126,57,115,95,63,124,121,98,45,	0,4834,5667,5900,6116,6270,7054,7247,7561,7865,8094,10653,
#Deleted in new
chrX	47218775	47226578	chrX:47218775-47226578	0	+	47218775	47218775	8553170	8	330,208,134,126,57,115,95,614,	0,4776,5609,5842,6058,6212,6996,7189,
#Deleted in new
chrX	47222131	47225036	chrX:47222131-47225036	0	+	47223557	47225036	789624	6	211,208,134,126,57,49,	0,1420,2253,2486,2702,2856,
#Deleted in new
chrX	47222852	47228990	chrX:47222852-47228990	0	+	47222852	47222852	8553170	11	907,134,126,57,115,95,739,98,230,91,424,	0,1532,1765,1981,2135,2919,3112,3959,4141,4526,5714,
#Deleted in new
chrX	47223008	47228990	chrX:47223008-47228990	1	+	47223557	47228768	0	16	303,208,134,126,57,115,95,63,124,121,98,106,43,91,78,260,	0,543,1376,1609,1825,1979,2763,2956,3270,3574,3803,3985,4172,4370,5558,5722,
#Deleted in new
chrX	47223017	47229993	chrX:47223017-47229993	1	+	47223095	47228768	0	16	294,208,134,126,57,115,95,63,124,121,98,106,43,91,78,1263,	0,534,1367,1600,1816,1970,2754,2947,3261,3565,3794,3976,4163,4361,5549,5713,
#Deleted in new
chrX	47223637	47225044	chrX:47223637-47225044	0	+	47223637	47225044	789624	5	122,92,126,57,57,	0,747,980,1196,1350,
#Deleted in new
chrX	47225964	47229251	chrX:47225964-47229251	0	+	47225964	47228768	789624	9	63,124,121,98,106,64,91,78,521,	0,314,618,847,1029,1195,1414,2602,2766,
#Deleted in new
chrX	47226095	47227223	chrX:47226095-47227223	0	+	47226095	47226095	8553170	5	307,121,98,106,43,	0,487,716,898,1085,
#Deleted in new
chrX	47226491	47227452	chrX:47226491-47227452	0	+	47226491	47226491	8553170	5	212,98,106,43,74,	0,320,502,689,887,
#Deleted in new
chrX	47227122	47228143	chrX:47227122-47228143	0	+	47227122	47227122	8553170	2	101,765,	0,256,
#Deleted in new
chrX	47227180	47229471	chrX:47227180-47229471	0	+	47227180	47229060	789624	4	43,91,78,452,	0,198,1386,1839,
#Deleted in new
chrX	47227180	47228991	chrX:47227180-47228991	0	+	47227180	47228991	789624	4	43,91,78,286,	0,198,1386,1525,
#Deleted in new
chrX	47228203	47228816	chrX:47228203-47228816	0	+	47228203	47228203	8553170	2	441,86,	0,527,
#Partially deleted in new
chrX	47232689	47248328	chrX:47232689-47248328	1	+	47233043	47247930	789624	21	530,110,131,118,146,62,103,174,159,225,84,95,207,53,243,71,113,150,116,89,536,	0,6380,6661,7100,7615,7897,8084,8587,8851,9392,9749,9936,10706,11808,11992,12326,12680,14382,14614,14921,15103,
#Partially deleted in new
chrX	47232865	47248327	chrX:47232865-47248327	3	+	47232914	47247930	0	21	354,110,131,118,146,62,103,174,159,225,84,95,207,53,243,71,113,150,116,89,535,	0,6204,6485,6924,7439,7721,7908,8411,8675,9216,9573,9760,10530,11632,11816,12150,12504,14206,14438,14745,14927,
#Partially deleted in new
chrX	47232983	47240371	chrX:47232983-47240371	0	+	47232983	47232983	8553170	4	236,110,557,67,	0,6086,6367,7321,
#Partially deleted in new
chrX	47233029	47248308	chrX:47233029-47248308	0	+	47233029	47233029	8553170	19	229,110,131,118,146,62,103,174,159,225,84,95,207,53,243,71,113,628,516,	0,6040,6321,6760,7275,7557,7744,8247,8511,9052,9409,9596,10366,11468,11652,11986,12340,14042,14763,
#Partially deleted in new
chrX	47233391	47240868	chrX:47233391-47240868	0	+	47240595	47240868	789624	7	142,110,131,118,146,62,95,	0,5678,5959,6398,6913,7195,7382,
#Partially deleted in new
chrX	47233771	47241632	chrX:47233771-47241632	0	+	47240595	47241632	789624	9	141,110,131,118,146,62,103,174,92,	0,5298,5579,6018,6533,6815,7002,7505,7769,
#Deleted in new
chrX	47240401	47241178	chrX:47240401-47241178	0	+	47240401	47240401	8553170	3	49,62,405,	0,185,372,
#Deleted in new
chrX	47241453	47242175	chrX:47241453-47242175	0	+	47241453	47241453	8553170	2	246,94,	0,628,
#Partially deleted in new
chrX	47242155	47244525	chrX:47242155-47244525	0	+	47242155	47242155	8553170	4	367,95,207,28,	0,470,1240,2342,
#Partially deleted in new
chrX	47243395	47245325	chrX:47243395-47245325	0	+	47243395	47243395	8553170	3	207,53,644,	0,1102,1286,
#Partially deleted in new
chrX	47244512	47247697	chrX:47244512-47247697	0	+	47244512	47244512	8553170	6	38,243,71,113,348,87,	0,169,503,857,2559,3098,
#Deleted in new
chrX	47247081	47247952	chrX:47247081-47247952	0	+	47247081	47247081	8553170	3	140,396,160,	0,222,711,
#Partially deleted in new
chrX	47273365	47274390	chrX:47273365-47274390	7	-	47273365	47273365	16724991	2	477,158,	0,867,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	47280810	47281063	chrX:47280810-47281063	3	-	47280810	47280810	8553170	1	253,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	47370582	47414305	chrX:47370582-47414305	3	+	47370668	47413594	789624	4	158,127,96,1937,	0,39693,40097,41786,
#Partially deleted in new
chrX	47388648	47388777	chrX:47388648-47388777	3	+	47388648	47388648	789624	1	129,	0,
#Partially deleted in new
chrX	47389960	47392300	chrX:47389960-47392300	7	-	47389960	47389960	16724991	3	454,485,66,	0,882,2274,
#Partially deleted in new
chrX	47438735	47439774	chrX:47438735-47439774	7	-	47438735	47438735	16724991	2	483,231,	0,808,
#Partially deleted in new
chrX	47445878	47482585	chrX:47445878-47482585	1	-	47447429	47467481	789624	5	3596,96,127,351,127,	0,10042,10393,21531,36580,
#Partially deleted in new
chrX	47445878	47482946	chrX:47445878-47482946	3	-	47447429	47467481	789624	5	3596,96,127,351,361,	0,10042,10393,21531,36707,
#Partially deleted in new
chrX	47449263	47467548	chrX:47449263-47467548	0	-	47449263	47467471	789624	4	211,96,167,139,	0,6657,7008,18146,
#Partially deleted in new
chrX	47449263	47467548	chrX:47449263-47467548	0	-	47449263	47449263	8553170	4	211,96,127,225,	0,6657,7008,18060,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	47476821	47477152	chrX:47476821-47477152	3	-	47476821	47476821	8553170	1	331,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	47483570	47484823	chrX:47483570-47484823	3	+	47483570	47483570	8553170	1	1253,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	47483570	47484808	chrX:47483570-47484808	0	+	47483570	47483570	8553170	1	1238,	0,
#Partially deleted in new
chrX	47512601	47513483	chrX:47512601-47513483	7	-	47512601	47512601	16724991	1	882,	0,
#Partially deleted in new
chrX	47561099	47571920	chrX:47561099-47571920	1	+	47562967	47571457	789624	16	152,155,104,103,155,108,142,28,146,203,177,47,119,132,135,598,	0,1809,2126,3697,3885,4143,5539,5784,5886,6130,7618,7887,8439,8793,9778,10223,
#Partially deleted in new
chrX	47561116	47571900	chrX:47561116-47571900	3	+	47562967	47571457	0	16	135,155,104,103,155,99,142,28,146,203,177,47,119,132,135,578,	0,1792,2109,3680,3868,4135,5522,5767,5869,6113,7601,7870,8422,8776,9761,10206,
#Partially deleted in new
chrX	47561221	47565975	chrX:47561221-47565975	1	+	47562967	47565354	0	6	30,155,104,103,155,724,	0,1687,2004,3575,3763,4030,
#Partially deleted in new
chrX	47563051	47565233	chrX:47563051-47565233	0	+	47563051	47563051	8553170	4	16,104,103,249,	0,174,1745,1933,
#Deleted in new
chrX	47569458	47570252	chrX:47569458-47570252	0	+	47569458	47569458	8553170	2	199,360,	0,434,
#Deleted in new
chrX	47569985	47571908	chrX:47569985-47571908	0	+	47569985	47569985	8553170	4	39,135,84,388,	0,892,1337,1535,
#Partially deleted in new
chrX	47571897	47619943	chrX:47571897-47619943	3	-	47572863	47619728	789624	13	1102,589,88,147,103,75,143,63,90,157,92,58,592,	0,2104,2790,3230,4233,4434,4600,5541,33080,33325,35047,35243,47454,
#Partially deleted in new
chrX	47571900	47619857	chrX:47571900-47619857	1	-	47572933	47619728	789624	13	1061,589,88,147,103,75,143,63,90,157,92,58,506,	0,2101,2787,3227,4230,4431,4597,5538,33077,33322,35044,35240,47451,
#Deleted in new
chrX	47572306	47574757	chrX:47572306-47574757	0	-	47572863	47574757	789624	2	655,70,	0,2381,
#Partially deleted in new
chrX	47582312	47586789	chrX:47582312-47586789	3	+	47583415	47586691	0	6	162,129,80,127,125,269,	0,1095,2623,2892,3230,4208,
#Partially deleted in new
chrX	47582407	47586023	chrX:47582407-47586023	1	+	47583415	47585414	789624	4	67,129,80,819,	0,1000,2528,2797,
#Partially deleted in new
chrX	47582449	47586789	chrX:47582449-47586789	1	+	47585006	47586691	789624	5	25,80,127,125,269,	0,2486,2755,3093,4071,
#Partially deleted in new
chrX	47582508	47585254	chrX:47582508-47585254	0	+	47582562	47585254	789624	4	82,129,80,50,	0,899,2427,2696,
#Deleted in new
chrX	47585341	47586789	chrX:47585341-47586789	0	+	47585341	47586691	789624	2	326,269,	0,1179,
#Deleted in new
chrX	47587428	47587505	chrX:47587428-47587505	3	+	47587428	47587428	5263520	1	77,	0,
#Partially deleted in new
chrX	47589954	47619387	chrX:47589954-47619387	0	-	47590197	47619387	789624	6	255,90,157,92,58,36,	0,15023,15268,16990,17186,29397,
#Partially deleted in new
chrX	47604709	47607014	chrX:47604709-47607014	0	-	47604709	47604709	8553170	3	358,157,70,	0,513,2235,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	47605232	47623509	chrX:47605232-47623509	3	-	47605232	47605232	8553170	4	147,92,58,420,	0,1712,1908,17857,
#Partially deleted in new
chrX	47623171	47628742	chrX:47623171-47628742	0	-	47623171	47623171	8553170	7	1269,112,192,174,192,171,641,	0,2886,3156,3601,3969,4299,4930,
#Partially deleted in new
chrX	47624212	47626580	chrX:47624212-47626580	0	-	47624212	47624212	8553170	3	228,112,253,	0,1845,2115,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	47624213	47630305	chrX:47624213-47630305	3	-	47624274	47629844	0	10	227,112,192,174,192,171,176,151,141,177,	0,1844,2114,2559,2927,3257,3888,5310,5555,5915,
#Partially deleted in new
chrX	47624213	47629965	chrX:47624213-47629965	1	-	47624274	47629844	0	9	227,112,192,174,192,171,176,151,197,	0,1844,2114,2559,2927,3257,3888,5310,5555,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	47624558	47629895	chrX:47624558-47629895	0	-	47624558	47624558	8553170	7	1611,192,174,192,171,1573,127,	0,1769,2214,2582,2912,3543,5210,
#Partially deleted in new
chrX	47625987	47629965	chrX:47625987-47629965	1	-	47626053	47629844	789624	8	182,192,174,192,171,176,151,197,	0,340,785,1153,1483,2114,3536,3781,
#Partially deleted in new
chrX	47626806	47629895	chrX:47626806-47629895	0	-	47626806	47627639	789624	6	140,192,171,176,122,127,	0,334,664,1295,2717,2962,
#Partially deleted in new
chrX	47628121	47629952	chrX:47628121-47629952	0	-	47628121	47628121	8553170	4	156,78,151,184,	0,354,1402,1647,
#Partially deleted in new
chrX	47635520	47650488	chrX:47635520-47650488	3	-	47636828	47641441	0	6	1407,102,432,444,244,66,	0,1492,2230,3374,5711,14902,
#Partially deleted in new
chrX	47636166	47650591	chrX:47636166-47650591	1	-	47636828	47641441	0	7	761,102,432,444,244,106,169,	0,846,1584,2728,5065,13754,14256,
#Partially deleted in new
chrX	47636810	47650591	chrX:47636810-47650591	1	-	47637034	47641441	0	6	117,40,60,244,106,169,	0,202,2468,4421,13110,13612,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	47648886	47650604	chrX:47648886-47650604	0	-	47648886	47648886	8553170	3	481,106,182,	0,1034,1536,
#Partially deleted in new
chrX	47651797	47659161	chrX:47651797-47659161	3	-	47651841	47658927	789624	7	98,64,108,68,82,107,47,	0,283,5385,5774,5984,7032,7317,
#Partially deleted in new
chrX	47651800	47657499	chrX:47651800-47657499	0	-	47651800	47651800	8553170	3	95,64,317,	0,280,5382,
#Partially deleted in new
chrX	47651800	47659107	chrX:47651800-47659107	0	-	47657206	47658963	789624	5	95,64,108,82,278,	0,280,5382,5981,7029,
#Partially deleted in new
chrX	47651804	47659117	chrX:47651804-47659117	1	-	47651841	47658963	789624	6	91,64,108,68,82,288,	0,276,5378,5767,5977,7025,
#Deleted in new
chrX	47657114	47659152	chrX:47657114-47659152	0	-	47657114	47657114	8553170	3	749,107,38,	0,1715,2000,
#Deleted in new
chrX	47658832	47660111	chrX:47658832-47660111	1	+	47658832	47658832	789624	2	348,217,	0,1062,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	47658852	47660377	chrX:47658852-47660377	3	+	47658852	47658852	8553170	1	1525,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	47707255	47753456	chrX:47707255-47753456	7	+	47707255	47707255	16724991	3	130,129,487,	0,28578,45714,
#Deleted in new
chrX	47718001	47719099	chrX:47718001-47719099	7	-	47718001	47718001	16724991	1	1098,	0,
#Deleted in new
chrX	47722330	47725932	chrX:47722330-47725932	5	+	47722330	47722330	16724991	9	233,56,197,192,111,48,97,137,141,	0,398,626,1196,1505,1956,2227,3236,3461,
#Partially deleted in new
chrX	47776826	47778697	chrX:47776826-47778697	7	-	47776826	47776826	16724991	2	464,969,	0,902,
#Deleted in new
chrX	47803295	47804789	chrX:47803295-47804789	7	+	47803295	47803295	16724991	1	1494,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	47836901	47922256	chrX:47836901-47922256	1	+	47846267	47916632	789624	5	86,217,127,96,7333,	0,9203,51097,58943,78022,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	47836901	47922211	chrX:47836901-47922211	1	+	47846267	47916632	789624	6	86,119,217,127,96,7288,	0,5748,9203,51097,58943,78022,
#Partially deleted in new
chrX	47836969	48002561	chrX:47836969-48002561	2	+	47846267	48002561	789624	5	18,217,127,96,34,	0,9135,51029,58875,165558,
#Partially deleted in new
chrX	47840962	47841702	chrX:47840962-47841702	7	-	47840962	47840962	16724991	1	740,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	47846172	47861045	chrX:47846172-47861045	0	+	47846172	47846172	8553170	2	149,326,	0,14547,
#Partially deleted in new
chrX	47974850	48003955	chrX:47974850-48003955	1	-	47976166	48002609	789624	6	2947,90,127,59,195,47,	0,8098,8434,27744,28657,29058,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	47983355	48071141	chrX:47983355-48071141	0	-	48057318	48066886	789624	12	56,59,195,110,119,27,108,81,96,127,190,77,	0,19239,20152,50694,53707,60394,62847,73911,77094,77463,83516,87709,
#Partially deleted in new
chrX	48004335	48009645	chrX:48004335-48009645	3	+	48007802	48009645	789624	5	82,231,159,79,97,	0,3381,4040,5030,5213,
#Partially deleted in new
chrX	48007795	48009729	chrX:48007795-48009729	1	+	48007802	48009645	789624	4	152,159,79,181,	0,580,1570,1753,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	48056309	48066583	chrX:48056309-48066583	3	+	48056309	48056309	789624	2	123,274,	0,10000,
#Partially deleted in new
chrX	48058179	48071658	chrX:48058179-48071658	3	-	48058467	48066886	789624	5	2024,96,127,190,392,	0,2270,2639,8692,13087,
#Partially deleted in new
chrX	48058213	48071658	chrX:48058213-48071658	1	-	48058467	48060069	789624	5	1986,96,127,190,392,	0,2236,2605,8658,13053,
#Partially deleted in new
chrX	48058213	48071116	chrX:48058213-48071116	1	-	48058467	48066886	789624	5	1990,96,127,190,52,	0,2236,2605,8658,12851,
#Partially deleted in new
chrX	48059797	48071634	chrX:48059797-48071634	0	-	48059797	48066886	789624	5	406,96,127,190,169,	0,652,1021,7074,11668,
#Partially deleted in new
chrX	48059797	48071634	chrX:48059797-48071634	0	-	48059797	48066886	789624	5	406,96,85,190,169,	0,652,1021,7074,11668,
#Partially deleted in new
chrX	48059947	48067060	chrX:48059947-48067060	0	-	48059947	48060069	789624	3	256,96,189,	0,502,6924,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	48107991	48114311	chrX:48107991-48114311	5	+	48107991	48107991	16724991	5	42,89,115,96,1119,	0,1968,2491,3268,5201,
#Partially deleted in new
chrX	48109980	48119630	chrX:48109980-48119630	7	+	48109980	48109980	16724991	6	68,115,96,50,136,97,	0,502,1279,3212,7031,9553,
#Partially deleted in new
chrX	48117083	48120210	chrX:48117083-48120210	5	+	48117083	48117083	16724991	3	64,161,111,	0,2450,3016,
#Deleted in new
chrX	48130656	48132613	chrX:48130656-48132613	3	+	48130687	48132529	789624	4	176,159,79,181,	0,604,1593,1776,
#Deleted in new
chrX	48135657	48136159	chrX:48135657-48136159	7	-	48135657	48135657	16724991	3	91,46,91,	0,339,411,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	48153867	48155941	chrX:48153867-48155941	7	-	48153867	48153867	16724991	3	125,86,1458,	0,212,616,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	48153979	48154074	chrX:48153979-48154074	3	-	48153979	48153979	8553170	1	95,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	48156366	48166350	chrX:48156366-48166350	7	+	48156366	48156366	16724991	8	49,162,115,95,43,150,103,583,	0,1647,2081,2904,4568,7679,8521,9401,
#Partially deleted in new
chrX	48177730	48178023	chrX:48177730-48178023	7	-	48177730	48177730	16724991	1	293,	0,
#Partially deleted in new
chrX	48186219	48196763	chrX:48186219-48196763	3	-	48187630	48195358	789624	9	637,105,136,50,96,115,123,89,33,	0,1407,3913,6012,7909,8520,8787,9070,10511,
#Partially deleted in new
chrX	48186219	48196763	chrX:48186219-48196763	1	-	48187630	48195358	789624	8	637,105,136,50,96,115,89,33,	0,1407,3913,6012,7909,8520,9070,10511,
#Partially deleted in new
chrX	48186219	48195358	chrX:48186219-48195358	1	-	48187630	48195358	789624	7	637,105,136,50,96,115,69,	0,1407,3913,6012,7909,8520,9070,
#Partially deleted in new
chrX	48186774	48192381	chrX:48186774-48192381	0	-	48187630	48192381	789624	4	82,105,136,150,	0,852,3358,5457,
#Partially deleted in new
chrX	48197220	48199431	chrX:48197220-48199431	7	+	48197220	48197220	16724991	4	211,214,73,58,	0,1487,1758,2153,
#Partially deleted in new
chrX	48206257	48206374	chrX:48206257-48206374	7	+	48206257	48206257	16724991	1	117,	0,
#Partially deleted in new
chrX	48212790	48218010	chrX:48212790-48218010	7	+	48212790	48212790	16724991	4	51,136,105,581,	0,1714,4068,4639,
#Deleted in new
chrX	48228832	48228959	chrX:48228832-48228959	7	-	48228832	48228832	16724991	1	127,	0,
#Partially deleted in new
chrX	48244893	48245745	chrX:48244893-48245745	7	+	48244893	48244893	16724991	2	334,196,	0,656,
#Partially deleted in new
chrX	48255316	48267444	chrX:48255316-48267444	3	+	48257241	48266387	789624	8	116,89,115,96,50,136,105,591,	0,1905,2429,3219,6449,8465,10970,11537,
#Deleted in new
chrX	48274903	48275047	chrX:48274903-48275047	7	-	48274903	48274903	16724991	1	144,	0,
#Deleted in new
chrX	48276703	48277578	chrX:48276703-48277578	7	-	48276703	48276703	16724991	3	100,115,69,	0,258,806,
#Partially deleted in new
chrX	48279422	48281792	chrX:48279422-48281792	7	+	48279422	48279422	16724991	4	214,215,64,124,	0,1585,1863,2246,
#Partially deleted in new
chrX	48296815	48304867	chrX:48296815-48304867	7	-	48296815	48296815	16724991	6	105,136,50,96,115,89,	0,2816,4897,6788,7411,7963,
#Partially deleted in new
chrX	48301549	48306179	chrX:48301549-48306179	5	-	48301549	48301549	16724991	5	213,96,115,89,67,	0,2054,2677,3229,4563,
#Partially deleted in new
chrX	48306768	48309055	chrX:48306768-48309055	7	+	48306768	48306768	16724991	4	39,216,73,195,	0,1426,1697,2092,
#Partially deleted in new
chrX	48322348	48326683	chrX:48322348-48326683	7	+	48322348	48322348	16724991	3	51,136,105,	0,1716,4230,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	48333674	48334439	chrX:48333674-48334439	3	-	48333674	48333674	8553170	2	90,180,	0,585,
#Partially deleted in new
chrX	48336898	48337169	chrX:48336898-48337169	7	-	48336898	48336898	16724991	1	271,	0,
#Partially deleted in new
chrX	48346427	48356666	chrX:48346427-48356666	3	-	48347503	48355249	789624	8	608,105,136,50,96,115,89,33,	0,1072,3559,5672,7571,8204,8753,10206,
#Partially deleted in new
chrX	48346625	48352247	chrX:48346625-48352247	0	-	48346625	48346625	8553170	4	410,105,136,148,	0,874,3361,5474,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	48348256	48356707	chrX:48348256-48356707	1	-	48349540	48355249	789624	8	192,48,136,50,96,115,89,74,	0,1283,1730,3843,5742,6375,6924,8377,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	48349445	48355272	chrX:48349445-48355272	1	-	48349843	48355249	789624	5	677,50,96,115,92,	0,2654,4553,5186,5735,
#Partially deleted in new
chrX	48357124	48359495	chrX:48357124-48359495	7	+	48357124	48357124	16724991	3	216,362,187,	0,1508,2184,
#Deleted in new
chrX	48371904	48372095	chrX:48371904-48372095	7	+	48371904	48371904	16724991	1	191,	0,
#Partially deleted in new
chrX	48383515	48393343	chrX:48383515-48393343	1	+	48384053	48392782	789624	7	49,89,115,96,50,105,588,	0,518,1045,1836,3795,8353,9240,
#Partially deleted in new
chrX	48383526	48393347	chrX:48383526-48393347	3	+	48384053	48391969	789624	8	38,89,115,96,50,136,105,592,	0,507,1034,1825,3784,5819,8342,9229,
#Partially deleted in new
chrX	48402077	48411899	chrX:48402077-48411899	3	-	48403455	48411372	789624	8	592,105,136,50,96,115,89,38,	0,1374,3866,5987,7900,8672,9226,9784,
#Partially deleted in new
chrX	48402081	48411910	chrX:48402081-48411910	1	-	48402642	48411372	789624	7	588,105,50,96,115,89,49,	0,1370,5983,7896,8668,9222,9780,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	48412302	48415285	chrX:48412302-48415285	7	+	48412302	48412302	16724991	4	117,93,357,193,	0,619,2113,2790,
#Deleted in new
chrX	48423341	48423468	chrX:48423341-48423468	7	-	48423341	48423341	16724991	1	127,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	48433200	48441619	chrX:48433200-48441619	7	+	48433200	48433200	16724991	3	72,146,101,	0,7474,8318,
#Partially deleted in new
chrX	48446892	48448879	chrX:48446892-48448879	7	-	48446892	48446892	16724991	3	203,1031,96,	0,536,1891,
#Partially deleted in new
chrX	48458536	48470177	chrX:48458536-48470177	1	-	48458932	48467924	789624	16	498,104,145,116,101,80,138,59,83,79,93,74,116,76,54,843,	0,999,1195,2112,2449,3181,3470,3696,4361,7478,7693,8262,8425,9173,9335,10798,
#Partially deleted in new
chrX	48458536	48470256	chrX:48458536-48470256	3	-	48458932	48467924	789624	17	498,104,145,116,101,80,138,59,83,79,93,74,116,76,54,102,75,	0,999,1195,2112,2449,3181,3470,3696,4361,7478,7693,8262,8425,9173,9335,10798,11645,
#Partially deleted in new
chrX	48458538	48467493	chrX:48458538-48467493	1	-	48458932	48467053	789624	13	496,104,145,116,101,80,138,59,83,79,93,74,532,	0,997,1193,2110,2447,3179,3468,3694,4359,7476,7691,8260,8423,
#Partially deleted in new
chrX	48458538	48467493	chrX:48458538-48467493	1	-	48458736	48466238	789624	14	417,78,104,145,116,101,80,138,59,84,79,93,74,532,	0,418,997,1193,2110,2447,3179,3468,3694,4359,7476,7691,8260,8423,
#Partially deleted in new
chrX	48458544	48467060	chrX:48458544-48467060	0	-	48458544	48458544	8553170	5	148,79,93,74,99,	0,7470,7685,8254,8417,
#Partially deleted in new
chrX	48458692	48460854	chrX:48458692-48460854	0	-	48458692	48458692	8553170	4	342,104,145,206,	0,843,1039,1956,
#Partially deleted in new
chrX	48459219	48460977	chrX:48459219-48460977	0	-	48459219	48459219	8553170	3	420,145,329,	0,512,1429,
#Partially deleted in new
chrX	48460985	48466872	chrX:48460985-48466872	0	-	48462966	48466872	789624	6	91,80,138,59,83,74,	0,732,1021,1247,1912,5813,
#Partially deleted in new
chrX	48461730	48468311	chrX:48461730-48468311	0	-	48461730	48467924	789624	11	67,138,59,83,79,93,74,116,76,54,71,	0,276,502,1167,4284,4499,5068,5231,5979,6141,6510,
#Partially deleted in new
chrX	48461751	48468557	chrX:48461751-48468557	0	-	48461751	48467924	789624	11	46,138,59,83,79,93,74,116,76,54,53,	0,255,481,1146,4263,4478,5047,5210,5958,6120,6753,
#Partially deleted in new
chrX	48462121	48468388	chrX:48462121-48468388	0	-	48462121	48467924	789624	10	23,59,83,79,93,74,116,76,54,84,	0,111,776,3893,4108,4677,4840,5588,5750,6183,
#Partially deleted in new
chrX	48462897	48469017	chrX:48462897-48469017	0	-	48462897	48467924	789624	8	83,79,93,74,116,76,54,133,	0,3117,3332,3901,4064,4812,4974,5987,
#Partially deleted in new
chrX	48466014	48470243	chrX:48466014-48470243	0	-	48466014	48467924	789624	8	79,93,74,116,76,54,102,62,	0,215,784,947,1695,1857,3320,4167,
#Partially deleted in new
chrX	48466014	48469557	chrX:48466014-48469557	0	-	48466014	48467924	789624	8	79,93,74,116,76,54,102,28,	0,215,784,947,1695,1857,3320,3515,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	48476020	48486364	chrX:48476020-48486364	1	+	48479113	48483018	789624	9	376,79,54,103,84,104,198,42,629,	0,3017,5268,5405,5611,6382,6576,6965,9715,
#Partially deleted in new
chrX	48476152	48482484	chrX:48476152-48482484	0	+	48476152	48476152	8553170	3	244,290,76,	0,5273,6256,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chrX	48476160	48486299	chrX:48476160-48486299	1	+	48478047	48483018	789624	14	236,106,208,70,91,79,53,54,103,84,98,198,42,564,	0,402,1800,2288,2456,2877,4990,5128,5265,5471,6248,6436,6825,9575,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrX	48476160	48486305	chrX:48476160-48486305	3	+	48478047	48483018	789624	13	236,208,70,91,79,53,54,103,84,104,198,42,570,	0,1800,2288,2456,2877,4990,5128,5265,5471,6242,6436,6825,9575,
#Partially deleted in new
chrX	48476202	48479070	chrX:48476202-48479070	0	+	48476202	48476202	8553170	5	194,159,70,91,33,	0,1807,2246,2414,2835,
#Partially deleted in new
chrX	48476217	48482604	chrX:48476217-48482604	0	+	48476217	48476217	8553170	6	179,53,54,290,104,8,	0,4933,5071,5208,6185,6379,
#Partially deleted in new
chrX	48476259	48479116	chrX:48476259-48479116	0	+	48476259	48476259	8553170	4	137,558,64,79,	0,1701,2357,2778,
#Partially deleted in new
chrX	48478680	48482954	chrX:48478680-48482954	0	+	48478680	48478680	8553170	7	27,79,53,54,290,104,358,	0,357,2470,2608,2745,3722,3916,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	48479037	48486311	chrX:48479037-48486311	0	+	48479037	48479037	8553170	9	79,53,54,103,84,98,198,42,576,	0,2113,2251,2388,2594,3371,3559,3948,6698,
#Partially deleted in new
chrX	48481164	48482954	chrX:48481164-48482954	0	+	48481164	48481164	8553170	6	39,54,103,84,98,358,	0,124,261,467,1244,1432,
#Partially deleted in new
chrX	48481425	48485816	chrX:48481425-48485816	0	+	48481425	48481425	8553170	5	103,84,104,431,81,	0,206,977,1171,4310,
#Partially deleted in new
chrX	48481481	48482954	chrX:48481481-48482954	0	+	48481481	48481481	8553170	4	47,84,87,358,	0,150,938,1115,
#Partially deleted in new
chrX	48481631	48485984	chrX:48481631-48485984	0	+	48481631	48481631	8553170	6	84,104,198,42,101,249,	0,771,965,1354,1609,4104,
#Partially deleted in new
chrX	48506522	48508838	chrX:48506522-48508838	3	-	48506522	48506522	789624	2	533,120,	0,2196,
#Partially deleted in new
chrX	48508961	48520806	chrX:48508961-48520806	1	+	48509820	48520476	789624	14	142,173,193,44,182,131,15,126,101,77,64,86,111,432,	0,822,2333,2930,3364,3627,5165,5278,5563,6755,6928,7099,8221,11413,
#Deleted in new
chrX	48508965	48511375	chrX:48508965-48511375	0	+	48508965	48508965	8553170	4	138,284,64,81,	0,458,927,2329,
#Partially deleted in new
chrX	48508991	48520808	chrX:48508991-48520808	0	+	48509820	48511908	789624	10	112,173,44,126,101,77,64,86,111,434,	0,792,2900,5248,5533,6725,6898,7069,8191,11383,
#Partially deleted in new
chrX	48508993	48520806	chrX:48508993-48520806	0	+	48509628	48511894	789624	13	110,389,122,44,182,131,126,101,77,64,86,111,432,	0,574,2372,2898,3332,3595,5246,5531,6723,6896,7067,8189,11381,
#Partially deleted in new
chrX	48509001	48520814	chrX:48509001-48520814	1	+	48509820	48520476	789624	14	102,173,193,44,182,131,18,126,101,77,64,86,111,440,	0,782,2293,2890,3324,3587,3833,5238,5523,6715,6888,7059,8181,11373,
#Deleted in new
chrX	48509010	48512719	chrX:48509010-48512719	0	+	48509820	48511894	789624	6	93,173,122,44,182,131,	0,773,2355,2881,3315,3578,
#Deleted in new
chrX	48509029	48511451	chrX:48509029-48511451	0	+	48509820	48511451	789624	4	74,154,173,157,	0,394,754,2265,
#Partially deleted in new
chrX	48509030	48520806	chrX:48509030-48520806	0	+	48509030	48509030	8553170	12	73,173,122,616,131,126,101,77,64,86,111,432,	0,753,2335,2861,3558,5209,5494,6686,6859,7030,8152,11344,
#Partially deleted in new
chrX	48509039	48520694	chrX:48509039-48520694	1	+	48509820	48520476	789624	13	64,173,193,44,182,131,126,101,77,64,86,111,320,	0,744,2255,2852,3286,3549,5200,5485,6677,6850,7021,8143,11335,
#Deleted in new
chrX	48509675	48512497	chrX:48509675-48512497	0	+	48509820	48511894	789624	4	281,122,44,172,	0,1690,2216,2650,
#Partially deleted in new
chrX	48509777	48520802	chrX:48509777-48520802	3	+	48509820	48520476	789624	14	179,193,44,182,131,18,15,126,101,77,64,86,111,428,	0,1517,2114,2548,2811,3057,4349,4462,4747,5939,6112,6283,7405,10597,
#Partially deleted in new
chrX	48509820	48520476	chrX:48509820-48520476	1	+	48509820	48520476	789624	13	136,193,44,182,131,15,126,101,77,64,86,111,102,	0,1474,2071,2505,2768,4306,4419,4704,5896,6069,6240,7362,10554,
#Partially deleted in new
chrX	48509820	48520476	chrX:48509820-48520476	1	+	48509820	48520476	789624	13	136,193,44,182,131,18,126,101,77,64,86,111,102,	0,1474,2071,2505,2768,3014,4419,4704,5896,6069,6240,7362,10554,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	48515441	48516229	chrX:48515441-48516229	0	+	48515441	48515441	8553170	3	352,64,169,	0,448,619,
#Partially deleted in new
chrX	48521157	48528716	chrX:48521157-48528716	3	+	48523771	48528457	789624	5	750,374,37,131,483,	0,2541,5831,5997,7076,
#Partially deleted in new
chrX	48521798	48528710	chrX:48521798-48528710	0	+	48521798	48521798	8553170	5	109,150,37,131,477,	0,2124,5190,5356,6435,
#Partially deleted in new
chrX	48521804	48528439	chrX:48521804-48528439	0	+	48521804	48521804	8553170	5	103,319,37,131,206,	0,1949,5184,5350,6429,
#Partially deleted in new
chrX	48521855	48528245	chrX:48521855-48528245	0	+	48523771	48528245	789624	6	52,108,374,37,131,12,	0,289,1843,5133,5299,6378,
#Partially deleted in new
chrX	48521868	48527253	chrX:48521868-48527253	0	+	48523771	48527253	789624	5	39,60,374,37,99,	0,324,1830,5120,5286,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	48524479	48524806	chrX:48524479-48524806	3	+	48524479	48524479	8553170	1	327,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	48526848	48527671	chrX:48526848-48527671	0	+	48526848	48526848	8553170	2	177,517,	0,306,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	48539456	48562609	chrX:48539456-48562609	3	+	48539797	48560975	789624	6	464,110,155,128,189,2996,	0,1876,5412,19440,19701,20157,
#Partially deleted in new
chrX	48539736	48559886	chrX:48539736-48559886	0	+	48539797	48558966	789624	5	184,110,128,189,273,	0,1596,19160,19421,19877,
#Partially deleted in new
chrX	48539769	48559685	chrX:48539769-48559685	0	+	48539769	48539769	8553170	4	151,128,189,72,	0,19127,19388,19844,
#Partially deleted in new
chrX	48539770	48559722	chrX:48539770-48559722	0	+	48539770	48539770	8553170	4	150,110,450,109,	0,1562,19126,19843,
#Partially deleted in new
chrX	48539797	48559284	chrX:48539797-48559284	0	+	48539797	48559284	789624	5	123,158,155,128,127,	0,1487,5071,19099,19360,
#Deleted in new
chrX	48574448	48576591	chrX:48574448-48576591	0	+	48574448	48574448	8553170	5	125,116,70,106,84,	0,719,1112,1865,2059,
#Deleted in new
chrX	48574483	48576419	chrX:48574483-48576419	0	+	48574483	48574483	8553170	4	90,116,523,106,	0,684,1077,1830,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	48574490	48577977	chrX:48574490-48577977	0	+	48574490	48574490	8553170	8	83,116,107,269,106,97,84,513,	0,677,1070,1324,1823,2017,2535,2974,
#Deleted in new
chrX	48574510	48576520	chrX:48574510-48576520	0	+	48574510	48574510	8553170	6	63,116,107,162,106,13,	0,657,1050,1411,1803,1997,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	48574523	48579066	chrX:48574523-48579066	3	+	48575180	48577086	789624	7	50,116,107,106,97,84,1602,	0,644,1037,1790,1984,2502,2941,
#Deleted in new
chrX	48574523	48577735	chrX:48574523-48577735	0	+	48574523	48574523	8553170	6	50,116,106,97,84,271,	0,644,1790,1984,2502,2941,
#Deleted in new
chrX	48574523	48576068	chrX:48574523-48576068	0	+	48574523	48574523	8553170	2	50,901,	0,644,
#Deleted in new
chrX	48574535	48576353	chrX:48574535-48576353	0	+	48574535	48574535	8553170	3	38,116,793,	0,632,1025,
#Deleted in new
chrX	48574951	48577868	chrX:48574951-48577868	1	+	48575180	48577086	789624	6	332,107,106,97,84,404,	0,609,1362,1556,2074,2513,
#Deleted in new
chrX	48574989	48575995	chrX:48574989-48575995	0	+	48574989	48574989	8553170	2	294,435,	0,571,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	48575898	48578291	chrX:48575898-48578291	1	+	48576185	48577162	789624	3	521,97,1266,	0,609,1127,
#Partially deleted in new
chrX	48579773	48581157	chrX:48579773-48581157	3	-	48579773	48579773	8553170	2	267,183,	0,1201,
#Deleted in new
chrX	48580740	48581165	chrX:48580740-48581165	3	+	48580740	48580740	8553170	1	425,	0,
#Deleted in new
chrX	48583092	48583339	chrX:48583092-48583339	7	-	48583092	48583092	16724991	1	247,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	48590041	48598827	chrX:48590041-48598827	0	+	48590155	48598827	789624	3	246,80,111,	0,7916,8675,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	48597477	48608867	chrX:48597477-48608867	3	+	48597996	48605032	789624	10	137,80,241,110,131,308,181,142,119,4020,	0,480,1239,1875,2109,2841,4306,4587,6794,7370,
#Partially deleted in new
chrX	48597491	48605193	chrX:48597491-48605193	1	+	48597996	48605032	789624	9	546,241,110,131,308,181,142,119,346,	0,1225,1861,2095,2827,4292,4573,6780,7356,
#Deleted in new
chrX	48597506	48600541	chrX:48597506-48600541	0	+	48597996	48598841	789624	6	108,80,207,110,131,223,	0,451,1244,1846,2080,2812,
#Deleted in new
chrX	48597514	48599682	chrX:48597514-48599682	0	+	48597996	48598841	789624	4	523,207,110,96,	0,1236,1838,2072,
#Deleted in new
chrX	48597520	48598293	chrX:48597520-48598293	0	+	48597520	48597520	8553170	2	94,336,	0,437,
#Deleted in new
chrX	48597533	48600281	chrX:48597533-48600281	0	+	48597533	48597533	8553170	2	1929,683,	0,2065,
#Partially deleted in new
chrX	48597808	48605193	chrX:48597808-48605193	0	+	48597808	48597808	8553170	8	1149,110,131,308,181,142,119,346,	0,1544,1778,2510,3975,4256,6463,7039,
#Deleted in new
chrX	48598719	48600535	chrX:48598719-48600535	0	+	48598719	48598719	8553170	4	238,110,119,217,	0,633,879,1599,
#Deleted in new
chrX	48599563	48600711	chrX:48599563-48600711	0	+	48599563	48599563	8553170	2	154,393,	0,755,
#Partially deleted in new
chrX	48600581	48604892	chrX:48600581-48604892	0	+	48600581	48604892	789624	5	75,181,142,119,45,	0,1202,1483,3690,4266,
#Partially deleted in new
chrX	48604191	48605118	chrX:48604191-48605118	0	+	48604191	48604191	8553170	2	199,271,	0,656,
#Partially deleted in new
chrX	48636164	48637135	chrX:48636164-48637135	7	+	48636164	48636164	16724991	1	971,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	48676595	48686871	chrX:48676595-48686871	0	+	48683853	48686871	789624	9	153,96,166,141,87,103,42,54,91,	0,6672,7224,7687,8951,9138,9350,9485,10185,
#Partially deleted in new
chrX	48683778	48691427	chrX:48683778-48691427	3	+	48683853	48691162	0	12	207,141,87,103,42,54,175,43,154,407,115,321,	0,504,1768,1955,2167,2302,3002,4275,4521,4881,5541,7328,
#Partially deleted in new
chrX	48683818	48688137	chrX:48683818-48688137	0	+	48683818	48683818	8553170	6	167,141,87,103,136,84,	0,464,1728,1915,3001,4235,
#Partially deleted in new
chrX	48683827	48688198	chrX:48683827-48688198	0	+	48683827	48683827	8553170	8	158,141,87,103,42,54,175,145,	0,455,1719,1906,2118,2253,2953,4226,
#Partially deleted in new
chrX	48685778	48688146	chrX:48685778-48688146	0	+	48685778	48685778	8553170	4	58,42,54,93,	0,167,302,2275,
#Partially deleted in new
chrX	48688278	48688999	chrX:48688278-48688999	0	+	48688278	48688278	8553170	2	175,340,	0,381,
#Deleted in new
chrX	48689019	48689594	chrX:48689019-48689594	0	+	48689019	48689019	8553170	2	47,275,	0,300,
#Partially deleted in new
chrX	48695553	48709010	chrX:48695553-48709010	1	+	48695819	48707570	0	6	318,146,663,147,130,1574,	0,3348,4537,10711,10944,11883,
#Partially deleted in new
chrX	48696594	48709012	chrX:48696594-48709012	3	+	48696784	48707570	0	6	209,146,663,147,130,1576,	0,2307,3496,9670,9903,10842,
#Partially deleted in new
chrX	48698962	48737163	chrX:48698962-48737163	3	-	48698962	48698962	8553170	3	200,600,125,	0,1143,38076,
#Deleted in new
chrX	48705260	48707844	chrX:48705260-48707844	0	+	48705260	48705260	8553170	4	93,147,130,408,	0,1004,1237,2176,
#Deleted in new
chrX	48706302	48707857	chrX:48706302-48707857	0	+	48706302	48706302	8553170	2	325,421,	0,1134,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	48724454	48724561	chrX:48724454-48724561	3	-	48724454	48724454	8553170	1	107,	0,
#Partially deleted in new
chrX	48761749	48773646	chrX:48761749-48773646	3	+	48761790	48773435	0	4	104,138,156,337,	0,4085,9177,11560,
#Partially deleted in new
chrX	48761750	48766237	chrX:48761750-48766237	0	+	48761750	48761750	8553170	2	103,403,	0,4084,
#Partially deleted in new
chrX	48762297	48773648	chrX:48762297-48773648	0	+	48762297	48762297	8553170	4	56,138,159,339,	0,3537,8626,11012,
#Partially deleted in new
chrX	48765871	48773646	chrX:48765871-48773646	0	+	48765871	48773435	789624	3	101,156,337,	0,5055,7438,
#Deleted in new
chrX	48775643	48776143	chrX:48775643-48776143	5	-	48775643	48775643	16724991	1	500,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	48775992	48776970	chrX:48775992-48776970	7	-	48775992	48775992	16724991	1	978,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	48776964	48777071	chrX:48776964-48777071	3	-	48776964	48776964	8553170	1	107,	0,
#Partially deleted in new
chrX	48786553	48794308	chrX:48786553-48794308	3	+	48791109	48794164	789624	6	92,239,378,146,126,516,	0,4537,5290,5769,6618,7239,
#Partially deleted in new
chrX	48786572	48794311	chrX:48786572-48794311	1	+	48791109	48794268	789624	6	73,239,378,146,126,178,	0,4518,5271,5750,6599,7561,
#Partially deleted in new
chrX	48801376	48805661	chrX:48801376-48805661	0	+	48802692	48805661	789624	7	55,71,123,129,89,85,31,	0,497,1286,1494,1751,4061,4254,
#Deleted in new
chrX	48801395	48802930	chrX:48801395-48802930	0	+	48802692	48802930	789624	4	356,71,123,60,	0,478,1267,1475,
#Partially deleted in new
chrX	48801699	48806706	chrX:48801699-48806706	0	+	48802692	48806706	789624	8	245,123,129,89,85,41,97,98,	0,963,1171,1428,3738,3931,4668,4909,
#Partially deleted in new
chrX	48801792	48808137	chrX:48801792-48808137	0	+	48801792	48801792	8553170	8	152,129,89,85,41,97,98,105,	0,1078,1335,3645,3838,4575,4816,6240,
#Partially deleted in new
chrX	48801948	48806706	chrX:48801948-48806706	0	+	48802692	48806706	789624	8	74,123,129,89,85,41,97,98,	0,714,922,1179,3489,3682,4419,4660,
#Partially deleted in new
chrX	48801990	48808046	chrX:48801990-48808046	0	+	48801990	48801990	8553170	8	32,129,89,85,41,97,98,14,	0,880,1137,3447,3640,4377,4618,6042,
#Partially deleted in new
chrX	48801994	48824982	chrX:48801994-48824982	3	+	48802692	48824612	0	29	148,123,129,89,85,41,97,98,105,69,127,66,60,90,107,68,169,129,169,134,69,193,150,175,677,114,147,129,439,	0,668,876,1133,3443,3636,4373,4614,6038,6263,12445,12680,12839,12967,13389,13580,13889,14146,14470,15331,16046,16225,18111,20625,20917,21677,21927,22171,22549,
#Partially deleted in new
chrX	48802015	48824795	chrX:48802015-48824795	1	+	48802692	48824612	0	29	257,123,129,89,85,41,97,98,105,69,127,66,60,90,107,68,169,129,169,134,69,193,150,175,677,114,147,129,252,	0,647,855,1112,3422,3615,4352,4593,6017,6242,12424,12659,12818,12946,13368,13559,13868,14125,14449,15310,16025,16204,18090,20604,20896,21656,21906,22150,22528,
#Partially deleted in new
chrX	48802015	48806946	chrX:48802015-48806946	1	+	48802692	48805675	789624	6	257,123,129,89,85,1316,	0,647,855,1112,3422,3615,
#Partially deleted in new
chrX	48802033	48824976	chrX:48802033-48824976	1	+	48802692	48824612	0	29	137,123,129,89,85,41,97,98,105,69,127,66,60,90,107,68,169,129,169,134,69,193,150,175,677,114,147,129,433,	0,629,837,1094,3404,3597,4334,4575,5999,6224,12406,12641,12800,12928,13350,13541,13850,14107,14431,15292,16007,16186,18072,20586,20878,21638,21888,22132,22510,
#Partially deleted in new
chrX	48802054	48824982	chrX:48802054-48824982	0	+	48802054	48802054	8553170	28	88,123,129,89,85,834,98,105,69,127,66,60,90,107,68,169,129,169,134,69,193,150,175,677,114,147,129,439,	0,608,816,1073,3383,3576,4554,5978,6203,12385,12620,12779,12907,13329,13520,13829,14086,14410,15271,15986,16165,18051,20565,20857,21617,21867,22111,22489,
#Partially deleted in new
chrX	48802063	48805855	chrX:48802063-48805855	1	+	48802692	48805675	789624	6	488,123,129,89,85,225,	0,599,807,1064,3374,3567,
#Partially deleted in new
chrX	48802081	48806233	chrX:48802081-48806233	1	+	48802942	48805675	789624	5	61,129,89,85,603,	0,789,1046,3356,3549,
#Partially deleted in new
chrX	48802083	48816011	chrX:48802083-48816011	0	+	48802692	48816011	789624	7	59,123,67,23,107,68,128,	0,579,787,12945,13300,13491,13800,
#Partially deleted in new
chrX	48802109	48808270	chrX:48802109-48808270	0	+	48802109	48802109	8553170	10	33,123,80,89,85,41,97,98,105,13,	0,553,810,1018,3328,3521,4258,4499,5923,6148,
#Partially deleted in new
chrX	48802158	48824956	chrX:48802158-48824956	0	+	48802692	48824612	0	29	77,123,129,89,85,41,97,98,105,69,127,66,60,90,107,68,169,129,169,134,69,193,150,175,677,114,147,129,413,	0,504,712,969,3279,3472,4209,4450,5874,6099,12281,12516,12675,12803,13225,13416,13725,13982,14306,15167,15882,16061,17947,20461,20753,21513,21763,22007,22385,
#Partially deleted in new
chrX	48802167	48824976	chrX:48802167-48824976	1	+	48802692	48824612	0	29	105,123,129,89,85,41,97,98,105,69,127,66,60,90,107,68,169,129,169,134,69,193,150,175,677,114,147,129,433,	0,495,703,960,3270,3463,4200,4441,5865,6090,12272,12507,12666,12794,13216,13407,13716,13973,14297,15158,15873,16052,17938,20452,20744,21504,21754,21998,22376,
#Partially deleted in new
chrX	48802185	48805745	chrX:48802185-48805745	1	+	48802692	48805675	789624	6	50,123,129,89,85,115,	0,477,685,942,3252,3445,
#Partially deleted in new
chrX	48802186	48824958	chrX:48802186-48824958	1	+	48802942	48824612	789624	28	86,129,89,85,41,97,98,105,69,127,66,60,90,107,68,169,129,169,134,69,193,150,175,677,114,147,129,415,	0,684,941,3251,3444,4181,4422,5846,6071,12253,12488,12647,12775,13197,13388,13697,13954,14278,15139,15854,16033,17919,20433,20725,21485,21735,21979,22357,
#Partially deleted in new
chrX	48802206	48805846	chrX:48802206-48805846	1	+	48802942	48805675	789624	5	66,129,89,85,216,	0,664,921,3231,3424,
#Partially deleted in new
chrX	48802514	48806431	chrX:48802514-48806431	0	+	48802692	48806431	789624	7	37,123,129,89,85,41,64,	0,148,356,613,2923,3116,3853,
#Partially deleted in new
chrX	48802549	48806445	chrX:48802549-48806445	0	+	48802692	48806445	789624	6	236,129,89,85,41,78,	0,321,578,2888,3081,3818,
#Partially deleted in new
chrX	48802779	48806648	chrX:48802779-48806648	0	+	48802779	48802779	8553170	6	220,89,85,41,97,40,	0,348,2658,2851,3588,3829,
#Partially deleted in new
chrX	48802887	48824967	chrX:48802887-48824967	0	+	48802887	48805675	789624	26	112,89,85,149,97,98,105,69,127,219,26,107,68,169,129,169,134,69,150,175,107,468,114,147,129,424,	0,240,2550,2743,3480,3721,5145,5370,11552,11787,12138,12496,12687,12996,13253,13577,14438,15153,17218,19732,20024,20233,20784,21034,21278,21656,
#Deleted in new
chrX	48802907	48803439	chrX:48802907-48803439	0	+	48802907	48802907	8553170	2	92,312,	0,220,
#Deleted in new
chrX	48806418	48806959	chrX:48806418-48806959	0	+	48806418	48806710	789624	2	46,351,	0,190,
#Partially deleted in new
chrX	48806608	48815023	chrX:48806608-48815023	0	+	48806608	48815023	789624	6	98,105,127,66,60,62,	0,1424,7831,8066,8225,8353,
#Partially deleted in new
chrX	48813352	48824976	chrX:48813352-48824976	0	+	48813352	48813352	8553170	17	1214,219,529,68,169,129,169,134,69,193,150,175,677,114,147,129,433,	0,1322,1609,2222,2531,2788,3112,3973,4688,4867,6753,9267,9559,10319,10569,10813,11191,
#Deleted in new
chrX	48814539	48815428	chrX:48814539-48815428	0	+	48814539	48814539	8553170	4	27,66,60,467,	0,135,294,422,
#Deleted in new
chrX	48814764	48816176	chrX:48814764-48816176	0	+	48814764	48814764	8553170	5	287,107,68,169,36,	0,619,810,1119,1376,
#Deleted in new
chrX	48815268	48815844	chrX:48815268-48815844	0	+	48815268	48815268	8553170	2	222,270,	0,306,
#Deleted in new
chrX	48815279	48816268	chrX:48815279-48816268	0	+	48815279	48815279	8553170	5	16,107,68,169,128,	0,104,295,604,861,
#Partially deleted in new
chrX	48815798	48817336	chrX:48815798-48817336	0	+	48815798	48815798	8553170	4	254,129,169,11,	0,342,666,1527,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	48816189	48816953	chrX:48816189-48816953	0	+	48816189	48816189	8553170	2	80,489,	0,275,
#Partially deleted in new
chrX	48816469	48824947	chrX:48816469-48824947	0	+	48816469	48820217	789624	10	164,134,69,150,175,677,114,147,129,404,	0,856,1571,3636,6150,6442,7202,7452,7696,8074,
#Partially deleted in new
chrX	48816472	48820180	chrX:48816472-48820180	0	+	48816472	48818048	789624	5	161,100,69,193,75,	0,887,1568,1747,3633,
#Partially deleted in new
chrX	48816569	48820203	chrX:48816569-48820203	0	+	48816569	48816569	8553170	4	64,134,372,98,	0,756,1471,3536,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	48816959	48818085	chrX:48816959-48818085	0	+	48816959	48816959	8553170	2	500,45,	0,1081,
#Deleted in new
chrX	48817637	48818286	chrX:48817637-48818286	0	+	48817637	48817637	8553170	2	472,67,	0,582,
#Partially deleted in new
chrX	48818070	48823109	chrX:48818070-48823109	0	+	48818070	48822635	789624	3	39,175,198,	0,4549,4841,
#Partially deleted in new
chrX	48818312	48823579	chrX:48818312-48823579	0	+	48818312	48818312	8553170	5	100,150,175,120,51,	0,1793,4307,4599,5216,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	48819446	48824976	chrX:48819446-48824976	0	+	48819446	48819446	8553170	7	809,175,677,114,147,129,433,	0,3173,3465,4225,4475,4719,5097,
#Deleted in new
chrX	48823517	48824976	chrX:48823517-48824976	0	+	48823517	48824612	789624	3	71,114,433,	0,154,1026,
#Partially deleted in new
chrX	48826512	48829869	chrX:48826512-48829869	3	+	48829123	48829825	789624	2	37,789,	0,2568,
#Deleted in new
chrX	48828872	48830138	chrX:48828872-48830138	1	+	48829123	48829825	789624	1	1266,	0,
#Partially deleted in new
chrX	48831093	48835633	chrX:48831093-48835633	3	-	48831259	48835532	789624	3	362,473,215,	0,775,4325,
#Partially deleted in new
chrX	48832262	48834827	chrX:48832262-48834827	0	-	48832262	48832262	8553170	2	79,313,	0,2252,
#Partially deleted in new
chrX	48893446	48898143	chrX:48893446-48898143	3	-	48893728	48897749	789624	7	371,111,129,64,100,98,77,	0,453,650,1591,3312,4277,4620,
#Partially deleted in new
chrX	48893446	48897762	chrX:48893446-48897762	1	-	48893728	48897749	789624	7	371,111,129,64,150,100,39,	0,453,650,1591,1905,3312,4277,
#Partially deleted in new
chrX	48893447	48898143	chrX:48893447-48898143	1	-	48893728	48897749	789624	8	370,111,129,64,150,100,98,77,	0,452,649,1590,1904,3311,4276,4619,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	48893448	48897771	chrX:48893448-48897771	0	-	48895927	48897749	789624	6	369,326,64,621,100,48,	0,451,1589,1903,3310,4275,
#Partially deleted in new
chrX	48893452	48897790	chrX:48893452-48897790	1	-	48893728	48896841	789624	7	365,111,129,64,103,100,67,	0,447,644,1585,1899,3306,4271,
#Partially deleted in new
chrX	48893553	48897228	chrX:48893553-48897228	0	-	48893553	48893553	8553170	6	264,111,129,64,100,136,	0,346,543,1484,3205,3539,
#Partially deleted in new
chrX	48893999	48897747	chrX:48893999-48897747	0	-	48893999	48897558	789624	6	11,129,64,150,100,212,	0,97,1038,1352,2759,3536,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	48896177	48897768	chrX:48896177-48897768	0	-	48896177	48896177	8553170	2	681,45,	0,1546,
#Partially deleted in new
chrX	48897911	48903142	chrX:48897911-48903142	3	+	48898509	48903084	0	7	182,85,112,113,285,64,215,	0,580,3278,4018,4321,4820,5016,
#Partially deleted in new
chrX	48897911	48903142	chrX:48897911-48903142	1	+	48898509	48903084	0	6	171,85,112,113,64,215,	0,580,3278,4018,4820,5016,
#Partially deleted in new
chrX	48897930	48903136	chrX:48897930-48903136	1	+	48898509	48903084	0	7	152,85,112,113,285,64,209,	0,561,3259,3999,4302,4801,4997,
#Partially deleted in new
chrX	48897937	48903142	chrX:48897937-48903142	0	+	48897937	48897937	8553170	6	639,112,113,285,64,215,	0,3252,3992,4295,4794,4990,
#Partially deleted in new
chrX	48897939	48903142	chrX:48897939-48903142	1	+	48898509	48903084	0	6	75,85,112,113,64,215,	0,552,3250,3990,4792,4988,
#Partially deleted in new
chrX	48897942	48902793	chrX:48897942-48902793	0	+	48897942	48897942	8553170	6	151,85,112,113,152,62,	0,549,3247,3987,4290,4789,
#Partially deleted in new
chrX	48897951	48903143	chrX:48897951-48903143	0	+	48897951	48897951	8553170	7	63,85,112,113,285,64,216,	0,540,3238,3978,4281,4780,4976,
#Partially deleted in new
chrX	48897995	48903098	chrX:48897995-48903098	0	+	48897995	48897995	8553170	7	87,85,112,113,152,64,171,	0,496,3194,3934,4237,4736,4932,
#Partially deleted in new
chrX	48898040	48903143	chrX:48898040-48903143	0	+	48898040	48898040	8553170	7	42,85,112,113,285,64,216,	0,451,3149,3889,4192,4691,4887,
#Partially deleted in new
chrX	48898252	48903142	chrX:48898252-48903142	1	+	48898509	48903084	0	6	324,112,113,285,64,215,	0,2937,3677,3980,4479,4675,
#Partially deleted in new
chrX	48898255	48903142	chrX:48898255-48903142	1	+	48898509	48903084	0	7	91,85,112,113,285,64,215,	0,236,2934,3674,3977,4476,4672,
#Partially deleted in new
chrX	48898259	48902793	chrX:48898259-48902793	0	+	48898509	48902793	8553170	6	87,85,112,113,285,62,	0,232,2930,3670,3973,4472,
#Partially deleted in new
chrX	48898317	48903056	chrX:48898317-48903056	0	+	48898317	48903056	789624	5	33,112,113,64,129,	0,2872,3612,4414,4610,
#Partially deleted in new
chrX	48898509	48903084	chrX:48898509-48903084	0	+	48898509	48898509	8553170	4	67,112,113,852,	0,2680,3420,3723,
#Partially deleted in new
chrX	48898509	48903084	chrX:48898509-48903084	0	+	48898509	48898509	8553170	6	67,112,113,299,64,157,	0,2680,3420,3709,4222,4418,
#Partially deleted in new
chrX	48898509	48903084	chrX:48898509-48903084	0	+	48898509	48898509	8553170	5	67,112,113,563,157,	0,2680,3420,3723,4418,
#Partially deleted in new
chrX	48903179	48911859	chrX:48903179-48911859	3	-	48903437	48911636	789624	5	286,737,152,183,314,	0,1566,3212,6634,8366,
#Partially deleted in new
chrX	48903179	48911651	chrX:48903179-48911651	0	-	48904726	48911636	789624	5	286,1319,152,183,106,	0,984,3212,6634,8366,
#Partially deleted in new
chrX	48903183	48911958	chrX:48903183-48911958	1	-	48904726	48911636	789624	4	2299,152,183,413,	0,3208,6630,8362,
#Partially deleted in new
chrX	48903183	48911646	chrX:48903183-48911646	1	-	48903363	48911636	789624	5	282,147,152,183,101,	0,1562,3208,6630,8362,
#Partially deleted in new
chrX	48903183	48911634	chrX:48903183-48911634	0	-	48903363	48911634	789624	4	282,152,183,89,	0,3208,6630,8362,
#Partially deleted in new
chrX	48903183	48911646	chrX:48903183-48911646	0	-	48909981	48911636	789624	4	2299,152,183,178,	0,3208,6630,8285,
#Partially deleted in new
chrX	48903612	48911669	chrX:48903612-48911669	1	-	48904589	48911636	789624	4	1280,152,183,124,	0,2779,6201,7933,
#Partially deleted in new
chrX	48903613	48909872	chrX:48903613-48909872	0	-	48904863	48909872	789624	3	1646,152,59,	0,2778,6200,
#Partially deleted in new
chrX	48904283	48911958	chrX:48904283-48911958	1	-	48904589	48911877	789624	4	609,152,183,100,	0,2108,5530,7575,
#Partially deleted in new
chrX	48904311	48911646	chrX:48904311-48911646	1	-	48904726	48911636	789624	3	1171,152,101,	0,2080,7234,
#Partially deleted in new
chrX	48904343	48911646	chrX:48904343-48911646	1	-	48904726	48911636	789624	4	1139,152,183,140,	0,2048,5470,7163,
#Partially deleted in new
chrX	48904439	48911646	chrX:48904439-48911646	1	-	48904726	48911636	789624	5	1043,152,183,84,101,	0,1952,5374,5794,7106,
#Partially deleted in new
chrX	48905165	48911937	chrX:48905165-48911937	0	-	48905165	48909871	789624	4	317,152,183,225,	0,1226,4648,6547,
#Partially deleted in new
chrX	48905295	48911646	chrX:48905295-48911646	0	-	48905295	48911636	789624	4	187,152,144,101,	0,1096,4557,6250,
#Partially deleted in new
chrX	48905397	48911646	chrX:48905397-48911646	1	-	48906437	48911636	789624	4	85,117,183,101,	0,994,4416,6148,
#Partially deleted in new
chrX	48905858	48911646	chrX:48905858-48911646	1	-	48906325	48911636	789624	3	685,183,140,	0,3955,5648,
#Partially deleted in new
chrX	48905955	48911677	chrX:48905955-48911677	1	-	48906325	48911636	789624	3	588,183,132,	0,3858,5590,
#Partially deleted in new
chrX	48906134	48911669	chrX:48906134-48911669	1	-	48906325	48911636	789624	2	409,124,	0,5411,
#Partially deleted in new
chrX	48913181	48919024	chrX:48913181-48919024	3	-	48914130	48918834	0	6	1113,177,373,51,110,251,	0,1213,1838,4599,5354,5592,
#Partially deleted in new
chrX	48914103	48914914	chrX:48914103-48914914	0	-	48914103	48914103	8553170	2	191,520,	0,291,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	48914395	48915735	chrX:48914395-48915735	0	-	48914395	48915278	789624	2	176,716,	0,624,
#Partially deleted in new
chrX	48922027	48957631	chrX:48922027-48957631	3	-	48923173	48957570	0	10	883,159,114,202,204,149,157,65,94,655,	0,1109,1605,1823,3819,12436,12683,12926,22162,34949,
#Partially deleted in new
chrX	48922205	48957189	chrX:48922205-48957189	0	-	48923173	48957189	789624	10	705,159,114,202,204,149,172,65,94,213,	0,931,1427,1645,3641,12258,12490,12748,21984,34771,
#Partially deleted in new
chrX	48922210	48957631	chrX:48922210-48957631	1	-	48923173	48957570	0	9	1085,114,202,204,149,172,65,94,655,	0,1422,1640,3636,12253,12485,12743,21979,34766,
#Partially deleted in new
chrX	48922211	48957599	chrX:48922211-48957599	1	-	48923173	48957570	0	9	1084,114,202,204,149,157,65,94,623,	0,1421,1639,3635,12252,12499,12742,21978,34765,
#Partially deleted in new
chrX	48922639	48957894	chrX:48922639-48957894	1	-	48923173	48957570	789624	11	656,114,202,204,149,157,65,94,464,8,374,	0,993,1211,3207,11824,12071,12314,21550,34337,34833,34881,
#Partially deleted in new
chrX	48922942	48958386	chrX:48922942-48958386	1	-	48923173	48944226	0	9	353,114,202,204,149,157,65,94,155,	0,690,908,2904,11521,11768,12011,21247,35289,
#Partially deleted in new
chrX	48925933	48957056	chrX:48925933-48957056	0	-	48925933	48925933	8553170	6	117,404,65,168,94,76,	0,8530,9020,10257,18256,31047,
#Partially deleted in new
chrX	48934581	48936339	chrX:48934581-48936339	0	-	48934581	48934581	8553170	4	31,157,65,149,	0,129,372,1609,
#Deleted in new
chrX	48939991	48940808	chrX:48939991-48940808	3	+	48939991	48939991	8553170	1	817,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	48959178	48959282	chrX:48959178-48959282	3	-	48959178	48959178	8553170	1	104,	0,
#Partially deleted in new
chrX	48961377	48968386	chrX:48961377-48968386	1	-	48962580	48967096	789624	5	1429,251,99,84,1443,	0,4677,5200,5383,5566,
#Partially deleted in new
chrX	48961385	48971569	chrX:48961385-48971569	3	-	48962580	48970271	789624	6	1421,251,99,84,163,2419,	0,4669,5192,5375,5558,7765,
#Deleted in new
chrX	48966089	48966758	chrX:48966089-48966758	0	-	48966089	48966758	789624	2	216,181,	0,488,
#Partially deleted in new
chrX	48973719	48987817	chrX:48973719-48987817	0	-	48973719	48973719	8553170	12	566,1209,131,100,57,96,78,114,213,96,135,33,	0,1435,4585,7495,7696,7876,8075,9259,9508,10055,11548,14065,
#Partially deleted in new
chrX	48973722	49002264	chrX:48973722-49002264	3	-	48974192	49002229	789624	26	563,155,94,123,131,100,57,96,78,114,213,96,135,93,78,100,48,32,48,185,151,108,27,62,67,77,	0,1432,2295,2518,4582,7492,7693,7873,8072,9256,9505,10052,11545,14062,14398,15888,16112,16249,16962,17203,19705,23527,24431,25515,25715,28465,
#Partially deleted in new
chrX	48973722	49002234	chrX:48973722-49002234	1	-	48974192	49002229	789624	25	563,155,94,123,131,100,57,96,78,114,213,96,135,78,100,48,32,48,185,151,108,27,62,67,47,	0,1432,2295,2518,4582,7492,7693,7873,8072,9256,9505,10052,11545,14398,15888,16112,16249,16962,17203,19705,23527,24431,25515,25715,28465,
#Partially deleted in new
chrX	48973722	49002249	chrX:48973722-49002249	1	-	48974192	49002229	789624	24	563,155,94,123,131,100,57,96,78,114,213,96,135,93,78,100,48,32,48,185,151,62,67,62,	0,1432,2295,2518,4582,7492,7693,7873,8072,9256,9505,10052,11545,14062,14398,15888,16112,16249,16962,17203,19705,25515,25715,28465,
#Partially deleted in new
chrX	48976255	48983859	chrX:48976255-48983859	0	-	48976255	48983859	789624	8	108,131,100,57,96,114,213,85,	0,2049,4959,5160,5340,6723,6972,7519,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chrX	48976906	48991386	chrX:48976906-48991386	0	-	48976906	48976906	8553170	16	1529,100,57,96,78,114,213,96,135,93,78,100,48,32,48,461,	0,4308,4509,4689,4888,6072,6321,6868,8361,10878,11214,12704,12928,13065,13778,14019,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chrX	48976906	49002262	chrX:48976906-49002262	0	-	48976906	48976906	8553170	20	1529,100,57,96,114,213,96,135,93,78,100,48,32,48,177,108,27,62,67,75,	0,4308,4509,4689,6072,6321,6868,8361,10878,11214,12704,12928,13065,13778,14019,20343,21247,22331,22531,25281,
#Partially deleted in new
chrX	48983391	48988651	chrX:48983391-48988651	0	-	48983391	48983391	8553170	5	49,96,135,93,531,	0,383,1876,4393,4729,
#Partially deleted in new
chrX	48989610	48997307	chrX:48989610-48997307	0	-	48990984	48997307	789624	6	100,48,32,48,185,58,	0,224,361,1074,1315,7639,
#Partially deleted in new
chrX	48991009	49002197	chrX:48991009-49002197	0	-	48991009	49002193	789624	6	93,108,27,62,67,10,	0,6240,7144,8228,8428,11178,
#Partially deleted in new
chrX	48993447	49002224	chrX:48993447-49002224	0	-	48993447	48997327	789624	7	131,108,27,62,67,99,37,	0,3802,4706,5790,5990,7413,8740,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	48997258	49002262	chrX:48997258-49002262	0	-	48997258	48997327	789624	7	99,27,62,67,124,99,75,	0,895,1979,2179,3307,3602,4929,
#Deleted in new
chrX	48997947	48999398	chrX:48997947-48999398	0	-	48997947	48997947	8553170	2	233,161,	0,1290,
#Deleted in new
chrX	48998973	48999504	chrX:48998973-48999504	0	-	48998973	48998973	8553170	2	326,67,	0,464,
#Partially deleted in new
chrX	49028725	49043410	chrX:49028725-49043410	0	-	49039245	49043226	789624	10	1876,148,76,57,118,105,246,239,114,300,	0,2671,4739,5000,5408,9284,9471,10381,11729,14385,
#Partially deleted in new
chrX	49028730	49043486	chrX:49028730-49043486	3	-	49030157	49043226	789624	10	1871,148,76,57,118,105,246,304,114,376,	0,2666,4734,4995,5403,9279,9466,10376,11724,14380,
#Partially deleted in new
chrX	49030514	49032067	chrX:49030514-49032067	0	-	49030514	49030514	8553170	2	87,671,	0,882,
#Partially deleted in new
chrX	49031396	49039803	chrX:49031396-49039803	0	-	49031396	49031396	8553170	8	148,76,57,118,105,246,239,69,	0,2068,2329,2737,6613,6800,7710,8338,
#Deleted in new
chrX	49037738	49038259	chrX:49037738-49038259	0	-	49037738	49037738	8553170	2	376,63,	0,458,
#Partially deleted in new
chrX	49053571	49068464	chrX:49053571-49068464	3	+	49062276	49068112	789624	10	306,159,91,134,141,295,63,175,99,1289,	0,8387,8663,8896,10289,10798,11464,11882,12175,13604,
#Partially deleted in new
chrX	49058965	49068339	chrX:49058965-49068339	1	+	49062276	49068112	789624	10	94,159,91,134,141,295,63,175,99,1164,	0,2993,3269,3502,4895,5404,6070,6488,6781,8210,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	49058982	49069857	chrX:49058982-49069857	1	+	49062276	49068112	789624	10	77,100,91,134,141,295,63,175,99,2682,	0,2976,3252,3485,4878,5387,6053,6471,6764,8193,
#Partially deleted in new
chrX	49059001	49068769	chrX:49059001-49068769	1	+	49062041	49068658	789624	11	94,146,91,134,141,295,63,175,99,915,226,	0,2957,3233,3466,4859,5368,6034,6452,6745,8174,9542,
#Partially deleted in new
chrX	49059014	49068354	chrX:49059014-49068354	1	+	49062276	49068112	789624	10	81,159,55,134,141,295,63,175,99,1179,	0,2944,3220,3453,4846,5355,6021,6439,6732,8161,
#Partially deleted in new
chrX	49059020	49068946	chrX:49059020-49068946	0	+	49062041	49062528	789624	11	39,159,55,134,141,295,63,175,99,915,403,	0,2938,3214,3447,4840,5349,6015,6433,6726,8155,9523,
#Deleted in new
chrX	49061877	49062665	chrX:49061877-49062665	0	+	49061877	49061877	8553170	2	448,198,	0,590,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	49066394	49069347	chrX:49066394-49069347	0	+	49066394	49066394	8553170	1	2953,	0,
#Deleted in new
chrX	49071155	49074071	chrX:49071155-49074071	3	-	49071868	49073987	789624	3	853,218,263,	0,1277,2653,
#Partially deleted in new
chrX	49071469	49079887	chrX:49071469-49079887	1	-	49071868	49078095	789624	8	539,218,102,209,80,75,72,137,	0,963,3894,4075,4396,6367,6571,8281,
#Deleted in new
chrX	49071596	49073835	chrX:49071596-49073835	0	-	49071596	49071596	8553170	2	412,27,	0,2212,
#Deleted in new
chrX	49072030	49073989	chrX:49072030-49073989	1	-	49072346	49073987	789624	2	620,181,	0,1778,
#Partially deleted in new
chrX	49074428	49079915	chrX:49074428-49079915	1	-	49074802	49078095	789624	11	484,146,102,209,80,95,106,105,75,72,165,	0,707,935,1116,1437,2001,2216,3214,3408,3612,5322,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	49074432	49080097	chrX:49074432-49080097	0	-	49074432	49074432	8553170	9	480,146,102,209,80,95,1267,72,159,	0,703,931,1112,1433,1997,2212,3608,5506,
#Deleted in new
chrX	49074441	49075877	chrX:49074441-49075877	0	-	49074866	49075877	789624	4	471,102,209,12,	0,922,1103,1424,
#Partially deleted in new
chrX	49074441	49080073	chrX:49074441-49080073	1	-	49074802	49078095	789624	11	471,146,102,209,80,95,106,105,75,72,284,	0,694,922,1103,1424,1988,2203,3201,3395,3599,5348,
#Partially deleted in new
chrX	49074442	49079867	chrX:49074442-49079867	1	-	49074802	49078095	789624	9	470,146,102,209,80,105,75,72,117,	0,693,921,1102,1423,3200,3394,3598,5308,
#Partially deleted in new
chrX	49074446	49079881	chrX:49074446-49079881	1	-	49074802	49078095	789624	11	466,146,60,209,80,95,106,105,75,72,131,	0,689,917,1098,1419,1983,2198,3196,3390,3594,5304,
#Partially deleted in new
chrX	49074639	49079898	chrX:49074639-49079898	1	-	49074802	49078095	789624	11	273,146,102,209,113,95,106,105,75,72,148,	0,496,724,905,1226,1790,2005,3003,3197,3401,5111,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	49074639	49101121	chrX:49074639-49101121	3	-	49074802	49078095	789624	12	273,146,102,209,80,95,109,105,75,72,350,72,	0,496,724,905,1226,1790,2005,3003,3197,3401,25565,26410,
#Deleted in new
chrX	49074639	49075378	chrX:49074639-49075378	0	-	49074802	49075378	789624	3	261,146,15,	0,496,724,
#Partially deleted in new
chrX	49074639	49079892	chrX:49074639-49079892	1	-	49074802	49078095	789624	9	273,146,90,209,80,105,75,72,142,	0,496,724,905,1226,3003,3197,3401,5111,
#Partially deleted in new
chrX	49074657	49079911	chrX:49074657-49079911	1	-	49074802	49078095	789624	10	255,146,102,209,80,95,106,75,72,161,	0,478,706,887,1208,1772,1987,3179,3383,5093,
#Partially deleted in new
chrX	49074668	49077746	chrX:49074668-49077746	0	-	49074802	49077746	789624	8	244,146,102,119,80,95,106,104,	0,467,695,876,1197,1761,1976,2974,
#Deleted in new
chrX	49074668	49075955	chrX:49074668-49075955	0	-	49074668	49074668	8553170	3	797,209,90,	0,876,1197,
#Partially deleted in new
chrX	49074699	49079872	chrX:49074699-49079872	1	-	49074866	49078095	789624	9	213,209,80,95,106,105,75,72,122,	0,845,1166,1730,1945,2943,3137,3341,5051,
#Partially deleted in new
chrX	49074703	49079929	chrX:49074703-49079929	1	-	49074802	49078095	789624	11	209,146,102,209,80,95,109,105,75,72,179,	0,432,660,841,1162,1726,1941,2939,3133,3337,5047,
#Partially deleted in new
chrX	49074791	49079902	chrX:49074791-49079902	1	-	49074802	49078095	789624	10	121,146,90,209,80,95,106,75,72,152,	0,344,572,753,1074,1638,1853,3045,3249,4959,
#Partially deleted in new
chrX	49074819	49077579	chrX:49074819-49077579	0	-	49074819	49074819	8553170	7	93,146,102,209,80,34,99,	0,316,544,725,1046,1610,2661,
#Partially deleted in new
chrX	49075212	49079900	chrX:49075212-49079900	0	-	49075212	49078095	789624	7	69,102,209,80,75,72,150,	0,151,332,653,2624,2828,4538,
#Partially deleted in new
chrX	49075218	49079889	chrX:49075218-49079889	0	-	49075218	49077894	789624	9	75,102,209,80,95,106,105,75,100,	0,145,326,647,1211,1426,2424,2618,4571,
#Deleted in new
chrX	49075358	49075874	chrX:49075358-49075874	0	-	49075358	49075358	8553170	2	107,330,	0,186,
#Partially deleted in new
chrX	49075363	49079880	chrX:49075363-49079880	0	-	49075363	49078095	789624	8	102,209,80,95,109,75,72,130,	0,181,502,1066,1281,2473,2677,4387,
#Partially deleted in new
chrX	49075372	49079902	chrX:49075372-49079902	0	-	49076516	49078095	789624	7	93,209,80,95,75,72,113,	0,172,493,1057,2464,2668,4417,
#Deleted in new
chrX	49075654	49076890	chrX:49075654-49076890	0	-	49075654	49075654	8553170	5	99,80,85,95,246,	0,211,536,775,990,
#Partially deleted in new
chrX	49075667	49078112	chrX:49075667-49078112	0	-	49075667	49078095	789624	7	86,80,119,106,105,75,72,	0,198,738,977,1975,2169,2373,
#Partially deleted in new
chrX	49075702	49079856	chrX:49075702-49079856	0	-	49076516	49078095	789624	7	51,80,95,105,75,72,67,	0,163,727,1940,2134,2338,4087,
#Partially deleted in new
chrX	49075703	49079859	chrX:49075703-49079859	0	-	49075703	49078095	789624	8	50,80,95,181,105,75,72,70,	0,162,726,941,1939,2133,2337,4086,
#Partially deleted in new
chrX	49075739	49080153	chrX:49075739-49080153	0	-	49075739	49078095	789624	8	14,80,95,160,105,75,72,215,	0,126,690,905,1903,2097,2301,4199,
#Partially deleted in new
chrX	49075744	49079903	chrX:49075744-49079903	0	-	49075744	49078095	789624	8	9,80,95,106,105,75,72,157,	0,121,685,900,1898,2092,2296,4002,
#Partially deleted in new
chrX	49075894	49079887	chrX:49075894-49079887	0	-	49075894	49078095	789624	6	84,95,106,75,72,137,	0,535,750,1942,2146,3856,
#Partially deleted in new
chrX	49075938	49080256	chrX:49075938-49080256	0	-	49075938	49078095	789624	7	40,95,106,105,75,72,318,	0,491,706,1704,1898,2102,4000,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	49076399	49077263	chrX:49076399-49077263	0	-	49076399	49076399	8553170	2	125,619,	0,245,
#Partially deleted in new
chrX	49076446	49101060	chrX:49076446-49101060	0	-	49076446	49100630	789624	6	78,109,105,75,72,479,	0,198,1196,1390,1594,24135,
#Partially deleted in new
chrX	49076507	49077618	chrX:49076507-49077618	0	-	49076507	49076507	8553170	3	17,106,44,	0,137,1067,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	49076768	49079856	chrX:49076768-49079856	0	-	49076768	49076768	8553170	4	816,75,72,106,	0,1068,1272,2982,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	49076989	49079915	chrX:49076989-49079915	0	-	49076989	49076989	8553170	3	922,72,165,	0,1051,2761,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	49077073	49079915	chrX:49077073-49079915	0	-	49077073	49077073	8553170	4	674,75,72,165,	0,763,967,2677,
#Partially deleted in new
chrX	49077486	49080097	chrX:49077486-49080097	0	-	49077486	49077486	8553170	4	261,75,72,159,	0,350,554,2452,
#Partially deleted in new
chrX	49077557	49079901	chrX:49077557-49079901	0	-	49077557	49077557	8553170	4	190,75,72,155,	0,279,483,2189,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	49077652	49101170	chrX:49077652-49101170	0	-	49077652	49078095	789624	6	95,27,72,157,350,121,	0,232,388,2286,22552,23397,
#Partially deleted in new
chrX	49078045	49079702	chrX:49078045-49079702	0	-	49078045	49078095	789624	2	67,94,	0,1563,
#Partially deleted in new
chrX	49078072	49079095	chrX:49078072-49079095	0	-	49078072	49078095	789624	2	40,60,	0,963,
#Partially deleted in new
chrX	49079959	49101144	chrX:49079959-49101144	0	-	49079959	49079959	8553170	3	369,96,95,	0,20622,21090,
#Partially deleted in new
chrX	49080030	49101144	chrX:49080030-49101144	0	-	49080030	49080030	8553170	2	298,563,	0,20551,
#Partially deleted in new
chrX	49080084	49101144	chrX:49080084-49101144	0	-	49080084	49080084	8553170	2	11,563,	0,20497,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	49082027	49082165	chrX:49082027-49082165	3	+	49082027	49082027	8553170	1	138,	0,
#Partially deleted in new
chrX	49113388	49123801	chrX:49113388-49123801	3	-	49113620	49123722	789624	11	367,86,70,124,103,133,214,110,125,155,255,	0,464,2337,2502,2832,3641,4208,6316,9009,9233,10158,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	49152650	49152944	chrX:49152650-49152944	3	+	49152650	49152650	8553170	1	294,	0,
#Partially deleted in new
chrX	49155241	49157351	chrX:49155241-49157351	7	-	49155241	49155241	16724991	3	56,150,49,	0,1065,2061,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	49162563	49168483	chrX:49162563-49168483	1	+	49164760	49166399	0	5	182,147,384,172,2410,	0,1219,2143,2626,3510,
#Deleted in new
chrX	49162664	49166632	chrX:49162664-49166632	0	+	49162664	49162664	8553170	4	1265,384,172,544,	0,2042,2525,3424,
#Deleted in new
chrX	49162676	49166214	chrX:49162676-49166214	0	+	49164760	49165001	789624	6	69,147,83,183,172,126,	0,1106,2030,2231,2513,3412,
#Deleted in new
chrX	49162842	49166632	chrX:49162842-49166632	1	+	49162889	49166399	789624	5	96,147,83,172,559,	0,940,1864,2347,3231,
#Deleted in new
chrX	49162873	49166399	chrX:49162873-49166399	1	+	49162889	49166399	789624	5	65,147,83,172,311,	0,909,1833,2316,3215,
#Deleted in new
chrX	49162889	49166632	chrX:49162889-49166632	3	+	49162889	49166399	0	6	49,147,83,228,172,559,	0,893,1817,1973,2300,3184,
#Deleted in new
chrX	49163931	49166632	chrX:49163931-49166632	1	+	49164666	49166399	789624	4	858,183,172,544,	0,976,1258,2157,
#Deleted in new
chrX	49163995	49166213	chrX:49163995-49166213	0	+	49163995	49163995	8553170	5	34,83,228,172,125,	0,711,867,1194,2093,
#Deleted in new
chrX	49164543	49166223	chrX:49164543-49166223	0	+	49164666	49166223	789624	3	246,172,135,	0,646,1545,
#Deleted in new
chrX	49165575	49165972	chrX:49165575-49165972	3	-	49165575	49165575	8553170	1	397,	0,
#Partially deleted in new
chrX	49171925	49173683	chrX:49171925-49173683	1	+	49172000	49173576	789624	3	171,153,296,	0,1203,1462,
#Partially deleted in new
chrX	49171925	49175239	chrX:49171925-49175239	3	+	49172000	49174694	789624	5	171,153,96,91,568,	0,1203,1462,2409,2746,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	49175263	49184893	chrX:49175263-49184893	0	-	49179276	49183841	789624	8	1002,300,187,204,138,261,86,68,	0,1639,2729,3008,3987,8393,9361,9562,
#Partially deleted in new
chrX	49175553	49186392	chrX:49175553-49186392	3	-	49175672	49186297	789624	9	712,300,187,204,138,114,184,86,137,	0,1349,2439,2718,3697,4139,8180,9071,10702,
#Partially deleted in new
chrX	49175620	49184789	chrX:49175620-49184789	1	-	49175672	49183841	789624	8	645,300,187,204,138,114,184,165,	0,1282,2372,2651,3630,4072,8113,9004,
#Deleted in new
chrX	49177136	49179283	chrX:49177136-49179283	0	-	49177136	49177136	8553170	3	66,483,33,	0,856,2114,
#Partially deleted in new
chrX	49177988	49184898	chrX:49177988-49184898	0	-	49177988	49183841	789624	7	191,204,138,114,184,86,73,	0,283,1262,1704,5745,6636,6837,
#Partially deleted in new
chrX	49179404	49186389	chrX:49179404-49186389	0	-	49179404	49179404	8553170	4	402,184,86,134,	0,4329,5220,6851,
#Partially deleted in new
chrX	49179805	49186528	chrX:49179805-49186528	0	-	49179805	49186297	789624	4	31,184,86,273,	0,3928,4819,6450,
#Partially deleted in new
chrX	49183593	49186392	chrX:49183593-49186392	0	-	49183593	49183593	8553170	3	324,86,137,	0,1031,2662,
#Partially deleted in new
chrX	49187803	49200259	chrX:49187803-49200259	3	-	49191436	49200186	789624	7	1479,331,192,196,125,66,109,	0,3629,5468,6362,9911,11164,12347,
#Partially deleted in new
chrX	49189136	49200176	chrX:49189136-49200176	0	-	49191436	49200176	789624	5	146,331,192,66,26,	0,2296,4135,9831,11014,
#Partially deleted in new
chrX	49189252	49200193	chrX:49189252-49200193	0	-	49194340	49200186	789624	6	30,331,192,196,66,43,	0,2180,4019,4913,9715,10898,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	49190541	49200199	chrX:49190541-49200199	1	-	49191436	49200186	789624	6	1222,192,196,125,66,49,	0,2730,3624,7173,8426,9609,
#Partially deleted in new
chrX	49194190	49200193	chrX:49194190-49200193	0	-	49197584	49200186	789624	4	171,301,66,43,	0,3348,4777,5960,
#Partially deleted in new
chrX	49194310	49200193	chrX:49194310-49200193	0	-	49197584	49200186	789624	4	51,353,66,43,	0,3176,4657,5840,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	49197016	49200195	chrX:49197016-49200195	0	-	49197016	49197016	8553170	2	2017,45,	0,3134,
#Deleted in new
chrX	49197376	49200195	chrX:49197376-49200195	0	-	49197376	49197376	8553170	3	463,66,45,	0,1591,2774,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	49198965	49202454	chrX:49198965-49202454	3	+	49198965	49198965	789624	2	259,283,	0,3206,
#Partially deleted in new
chrX	49205062	49233371	chrX:49205062-49233371	1	-	49205136	49233309	789624	48	305,198,113,128,108,170,132,131,102,103,97,128,160,92,66,129,21,84,111,159,202,147,53,108,88,107,60,130,157,52,46,82,121,208,226,161,27,94,93,158,104,197,153,143,140,106,250,87,	0,553,1448,1665,1942,3452,4199,4566,4878,5238,5527,5902,6259,6835,7180,7604,7911,8756,9096,10023,10279,11319,12692,12835,13392,13566,13819,14258,14571,15410,15972,17459,17655,17866,19698,20846,21154,21346,21547,21907,22973,23188,25157,25404,25787,26139,26615,28222,
#Partially deleted in new
chrX	49205062	49233309	chrX:49205062-49233309	1	-	49205136	49233309	789624	48	305,198,113,128,108,170,132,131,102,103,97,128,160,92,66,129,21,84,111,159,202,147,53,108,88,107,60,130,157,52,46,82,121,208,226,161,27,94,93,191,104,197,153,143,140,106,15,65,	0,553,1448,1665,1942,3452,4199,4566,4878,5238,5527,5902,6259,6835,7180,7604,7911,8756,9096,10023,10279,11319,12692,12835,13392,13566,13819,14258,14571,15410,15972,17459,17655,17866,19698,20846,21154,21346,21547,21874,22973,23188,25157,25404,25787,26139,26615,28182,
#Partially deleted in new
chrX	49205062	49233371	chrX:49205062-49233371	3	-	49205136	49233309	789624	48	305,198,113,128,108,170,132,131,102,103,97,128,160,92,66,129,21,84,111,159,202,147,53,108,88,107,60,130,157,52,46,82,121,208,226,161,27,94,93,191,104,197,153,143,140,106,250,87,	0,553,1448,1665,1942,3452,4199,4566,4878,5238,5527,5902,6259,6835,7180,7604,7911,8756,9096,10023,10279,11319,12692,12835,13392,13566,13819,14258,14571,15410,15972,17459,17655,17866,19698,20846,21154,21346,21547,21874,22973,23188,25157,25404,25787,26139,26615,28222,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	49208815	49209712	chrX:49208815-49209712	0	-	49209126	49209712	789624	2	578,84,	0,813,
#Deleted in new
chrX	49209660	49210999	chrX:49209660-49210999	0	-	49209660	49209660	8553170	4	99,102,103,410,	0,280,640,929,
#Deleted in new
chrX	49222257	49223143	chrX:49222257-49223143	0	-	49222257	49222257	8553170	4	87,82,121,215,	0,264,460,671,
#Deleted in new
chrX	49233955	49234501	chrX:49233955-49234501	7	-	49233955	49233955	16724991	1	546,	0,
#Partially deleted in new
chrX	49235466	49250526	chrX:49235466-49250526	3	+	49235636	49250261	789624	17	220,178,133,107,67,179,195,63,120,120,117,102,108,96,60,75,379,	0,1619,6549,7419,7651,7817,11264,12029,12182,12724,12940,13166,13350,13700,14042,14184,14681,
#Partially deleted in new
chrX	49235495	49243466	chrX:49235495-49243466	0	+	49235495	49235495	8553170	6	191,178,83,107,67,183,	0,1590,6570,7390,7622,7788,
#Partially deleted in new
chrX	49236892	49243346	chrX:49236892-49243346	0	+	49236892	49236892	8553170	5	371,133,107,67,63,	0,5123,5993,6225,6391,
#Partially deleted in new
chrX	49250435	49264826	chrX:49250435-49264826	3	-	49251333	49258505	0	12	1048,102,77,151,81,88,105,88,139,105,232,166,	0,1228,2690,3481,4993,5279,6315,6489,6991,7228,7860,14225,
#Partially deleted in new
chrX	49250438	49264826	chrX:49250438-49264826	1	-	49251333	49258505	0	11	1045,102,77,151,81,88,105,88,139,232,166,	0,1225,2687,3478,4990,5276,6312,6486,6988,7857,14222,
#Partially deleted in new
chrX	49250438	49264826	chrX:49250438-49264826	1	-	49251333	49258505	789624	11	1045,102,77,151,81,88,262,139,105,232,166,	0,1225,2687,3478,4990,5276,6312,6988,7225,7857,14222,
#Partially deleted in new
chrX	49251333	49259240	chrX:49251333-49259240	1	-	49251333	49259240	789624	10	432,77,151,81,88,105,88,139,149,16,	0,1792,2583,4095,4381,5417,5591,6093,6962,7891,
#Partially deleted in new
chrX	49251333	49258527	chrX:49251333-49258527	1	-	49251333	49258505	0	10	150,102,77,151,81,88,105,88,139,232,	0,330,1792,2583,4095,4381,5417,5591,6093,6962,
#Partially deleted in new
chrX	49251333	49258505	chrX:49251333-49258505	1	-	49251333	49258505	0	9	432,77,151,81,88,105,88,139,210,	0,1792,2583,4095,4381,5417,5591,6093,6962,
#Partially deleted in new
chrX	49269842	49287225	chrX:49269842-49287225	1	+	49281436	49287090	789624	5	91,266,56,80,1392,	0,765,11563,12141,15991,
#Partially deleted in new
chrX	49269853	49288095	chrX:49269853-49288095	3	+	49269869	49287090	789624	4	1020,56,83,2262,	0,11552,12127,15980,
#Partially deleted in new
chrX	49269869	49287170	chrX:49269869-49287170	1	+	49281436	49287090	789624	4	64,56,80,1337,	0,11536,12114,15964,
#Partially deleted in new
chrX	49270620	49301461	chrX:49270620-49301461	0	+	49270620	49301443	789624	4	253,56,83,111,	0,10785,11360,30730,
#Deleted in new
chrX	49273053	49275768	chrX:49273053-49275768	3	+	49273053	49273053	8553170	1	2715,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	49280775	49287510	chrX:49280775-49287510	1	+	49281436	49287090	789624	3	686,80,1677,	0,1208,5058,
#Partially deleted in new
chrX	49303668	49319844	chrX:49303668-49319844	3	+	49304859	49319750	789624	5	85,89,121,126,117,	0,1183,1735,13494,16059,
#Partially deleted in new
chrX	49322056	49329384	chrX:49322056-49329384	3	+	49323193	49329293	789624	5	88,92,121,126,114,	0,1129,1686,4633,7214,
#Partially deleted in new
chrX	49331615	49338952	chrX:49331615-49338952	3	+	49332737	49338858	789624	5	74,92,121,126,117,	0,1114,1671,4631,7220,
#Partially deleted in new
chrX	49341191	49345922	chrX:49341191-49345922	3	+	49342303	49345922	789624	4	64,92,121,126,	0,1104,1661,4605,
#Deleted in new
chrX	49529868	49529985	chrX:49529868-49529985	3	+	49529868	49529891	789624	1	117,	0,
#Partially deleted in new
chrX	49532210	49539538	chrX:49532210-49539538	3	+	49533331	49539447	789624	5	74,92,121,126,114,	0,1113,1670,4613,7214,
#Partially deleted in new
chrX	49541766	49549094	chrX:49541766-49549094	3	+	49542887	49549003	789624	5	74,92,121,126,114,	0,1113,1670,4613,7214,
#Partially deleted in new
chrX	49551277	49568218	chrX:49551277-49568218	3	+	49561996	49568114	789624	5	119,92,121,126,127,	0,10711,11268,14217,16814,
#Partially deleted in new
chrX	49551332	49558649	chrX:49551332-49558649	3	+	49552443	49558555	789624	5	64,92,121,126,117,	0,1103,1660,4603,7200,
#Partially deleted in new
chrX	49560875	49568205	chrX:49560875-49568205	1	+	49561996	49568114	789624	5	74,92,121,126,114,	0,1113,1670,4619,7216,
#Partially deleted in new
chrX	49570433	49577754	chrX:49570433-49577754	3	+	49571554	49577663	789624	5	74,92,121,126,114,	0,1113,1670,4614,7207,
#Partially deleted in new
chrX	49579982	49587301	chrX:49579982-49587301	3	+	49581103	49587210	789624	5	74,92,121,126,114,	0,1113,1670,4613,7205,
#Partially deleted in new
chrX	49589495	49606109	chrX:49589495-49606109	3	+	49600174	49606015	789624	5	108,92,121,126,117,	0,10671,11228,14172,16497,
#Partially deleted in new
chrX	49589528	49596827	chrX:49589528-49596827	3	+	49590650	49596733	789624	5	75,89,121,126,117,	0,1114,1668,4589,7182,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	49599024	49608536	chrX:49599024-49608536	0	+	49600174	49605086	789624	6	103,92,121,126,143,2544,	0,1142,1699,4643,5973,6968,
#Partially deleted in new
chrX	49599061	49606355	chrX:49599061-49606355	1	+	49600174	49606015	789624	5	66,92,121,126,363,	0,1105,1662,4606,6931,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	49600174	49608534	chrX:49600174-49608534	1	+	49600174	49606015	789624	4	84,121,126,2542,	0,549,3493,5818,
#Deleted in new
chrX	49632499	49633349	chrX:49632499-49633349	7	-	49632499	49632499	16724991	1	850,	0,
#Deleted in new
chrX	49664843	49668680	chrX:49664843-49668680	7	-	49664843	49664843	16724991	1	3837,	0,
#Partially deleted in new
chrX	49687449	49695993	chrX:49687449-49695993	3	-	49687540	49694770	789624	6	114,126,126,103,71,125,	0,1968,3799,6649,7258,8419,
#Partially deleted in new
chrX	49829259	49833973	chrX:49829259-49833973	3	+	49830428	49833862	789624	5	37,108,88,126,128,	0,1139,1737,3265,4586,
#Partially deleted in new
chrX	49829302	49833973	chrX:49829302-49833973	1	+	49830428	49833862	789624	5	49,108,88,126,128,	0,1096,1694,3222,4543,
#Deleted in new
chrX	49829347	49831331	chrX:49829347-49831331	0	+	49829347	49829347	8553170	2	1159,335,	0,1649,
#Partially deleted in new
chrX	49830683	49833967	chrX:49830683-49833967	0	+	49830683	49830683	8553170	4	120,88,126,122,	0,313,1841,3162,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	49876723	49879241	chrX:49876723-49879241	3	-	49876723	49876723	789624	2	2024,151,	0,2367,
#Deleted in new
chrX	49879947	49882565	chrX:49879947-49882565	3	+	49880307	49881624	789624	1	2618,	0,
#Partially deleted in new
chrX	49911619	49912362	chrX:49911619-49912362	7	-	49911619	49911619	16724991	1	743,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chrX	49922614	50099235	chrX:49922614-50099235	1	+	49925298	50092219	0	15	178,335,144,147,152,100,188,123,207,81,543,187,399,217,7107,	0,792,2556,119701,147264,149874,153180,157979,159026,163365,163713,166083,167501,168055,169514,
#Partially deleted in new
chrX	49922664	50092482	chrX:49922664-50092482	1	+	49925298	50092219	0	15	128,76,144,147,152,100,188,123,207,81,543,187,399,217,354,	0,742,2506,119651,147214,149824,153130,157929,158976,163315,163663,166033,167451,168005,169464,
#Partially deleted in new
chrX	49923403	50042541	chrX:49923403-50042541	1	+	49925298	50042494	789624	3	79,144,226,	0,1767,118912,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	49945335	49945442	chrX:49945335-49945442	3	-	49945335	49945335	8553170	1	107,	0,
#Deleted in new
chrX	50003147	50003238	chrX:50003147-50003238	3	+	50003147	50003147	5263520	1	91,	0,
#Deleted in new
chrX	50003502	50003588	chrX:50003502-50003588	3	+	50003502	50003502	5263520	1	86,	0,
#Partially deleted in new
chrX	50008430	50008514	chrX:50008430-50008514	3	+	50008430	50008430	5263520	1	84,	0,
#Partially deleted in new
chrX	50008963	50009028	chrX:50008963-50009028	3	+	50008963	50008963	5263520	1	65,	0,
#Partially deleted in new
chrX	50009721	50009805	chrX:50009721-50009805	3	+	50009721	50009721	5263520	1	84,	0,
#Partially deleted in new
chrX	50010671	50010750	chrX:50010671-50010750	3	+	50010671	50010671	5263520	1	79,	0,
#Partially deleted in new
chrX	50013240	50013337	chrX:50013240-50013337	3	+	50013240	50013240	5263520	1	97,	0,
#Partially deleted in new
chrX	50014597	50014683	chrX:50014597-50014683	3	+	50014597	50014597	5263520	1	86,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chrX	50042337	50092660	chrX:50042337-50092660	2	+	50042337	50050347	789624	14	125,131,194,152,100,188,123,207,81,543,187,399,217,532,	0,7945,12102,27541,30151,33457,38256,39303,43642,43990,46360,47778,48332,49791,
#Partially deleted in new
chrX	50067575	50092406	chrX:50067575-50092406	1	+	50069925	50092219	0	12	185,152,100,188,123,207,81,543,187,399,217,278,	0,2303,4913,8219,13018,14065,18404,18752,21122,22540,23094,24553,
#Partially deleted in new
chrX	50067963	50092660	chrX:50067963-50092660	1	+	50069925	50092219	0	13	52,53,152,100,188,123,207,81,543,187,399,217,532,	0,148,1915,4525,7831,12630,13677,18016,18364,20734,22152,22706,24165,
#Partially deleted in new
chrX	50069500	50092864	chrX:50069500-50092864	1	+	50069925	50092219	0	12	244,152,100,188,123,207,81,543,187,399,217,736,	0,378,2988,6294,11093,12140,16479,16827,19197,20615,21169,22628,
#Partially deleted in new
chrX	50069554	50092894	chrX:50069554-50092894	0	+	50069925	50085526	789624	12	476,100,188,123,207,183,81,543,187,399,217,766,	0,2934,6240,11039,12086,15897,16425,16773,19143,20561,21115,22574,
#Partially deleted in new
chrX	50081664	50092660	chrX:50081664-50092660	0	+	50081664	50092219	789624	8	183,81,543,72,187,399,217,532,	0,4315,4663,6748,7033,8451,9005,10464,
#Deleted in new
chrX	50156158	50156371	chrX:50156158-50156371	7	+	50156158	50156158	16724991	1	213,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	50171196	50171297	chrX:50171196-50171297	3	-	50171196	50171196	8553170	1	101,	0,
#Partially deleted in new
chrX	50190767	50201013	chrX:50190767-50201013	3	-	50190959	50200889	789624	6	348,2133,102,51,96,151,	0,1536,6123,6776,7889,10095,
#Partially deleted in new
chrX	50190776	50200372	chrX:50190776-50200372	1	-	50190959	50198752	789624	6	339,2133,102,51,96,143,	0,1527,6114,6767,7880,9453,
#Partially deleted in new
chrX	50190776	50200372	chrX:50190776-50200372	0	-	50190776	50190776	8553170	6	339,2129,102,51,96,143,	0,1527,6114,6767,7880,9453,
#Deleted in new
chrX	50192923	50200372	chrX:50192923-50200372	0	-	50192923	50198752	789624	6	99,292,102,51,96,143,	0,1221,3967,4620,5733,7306,
#Deleted in new
chrX	50193922	50200358	chrX:50193922-50200358	0	-	50193922	50198752	789624	5	514,102,51,96,129,	0,2968,3621,4734,6307,
#Deleted in new
chrX	50194089	50200372	chrX:50194089-50200372	0	-	50194089	50194089	8553170	5	365,102,51,96,143,	0,2801,3454,4567,6140,
#Partially deleted in new
chrX	50202712	50285245	chrX:50202712-50285245	0	+	50202712	50202712	8553170	4	98,48,75,119,	0,1850,81829,82414,
#Partially deleted in new
chrX	50204494	50285245	chrX:50204494-50285245	0	+	50204494	50204494	8553170	3	116,75,119,	0,80047,80632,
#Partially deleted in new
chrX	50204764	50351910	chrX:50204764-50351910	3	+	50285163	50351703	789624	13	186,75,133,108,131,2992,96,93,138,156,150,131,304,	0,79777,80362,84015,90098,103740,107772,109091,137437,141887,142861,146476,146842,
#Partially deleted in new
chrX	50204944	50351910	chrX:50204944-50351910	1	+	50285163	50351703	789624	9	6,75,133,108,138,156,150,131,304,	0,79597,80182,83835,137257,141707,142681,146296,146662,
#Partially deleted in new
chrX	50204944	50351910	chrX:50204944-50351910	0	+	50285163	50312537	789624	12	6,75,133,108,131,96,93,138,156,150,131,304,	0,79597,80182,83835,89918,107592,108911,137257,141707,142681,146296,146662,
#Partially deleted in new
chrX	50284535	50351910	chrX:50284535-50351910	1	+	50285163	50351703	789624	12	81,133,108,131,2992,96,93,138,156,150,131,304,	0,591,4244,10327,23969,28001,29320,57666,62116,63090,66705,67071,
#Partially deleted in new
chrX	50284535	50351910	chrX:50284535-50351910	1	+	50285163	50351703	789624	8	81,133,108,138,156,150,131,304,	0,591,4244,57666,62116,63090,66705,67071,
#Partially deleted in new
chrX	50341706	50351716	chrX:50341706-50351716	0	+	50341706	50341706	8553170	5	633,156,150,131,110,	0,4945,5919,9534,9900,
#Partially deleted in new
chrX	50365408	50470738	chrX:50365408-50470738	3	-	50368939	50470678	789624	28	3611,124,111,87,142,161,135,114,108,97,108,97,105,229,100,92,82,140,109,184,103,123,107,136,105,81,111,705,	0,5017,6315,9562,10615,11349,12689,13169,14218,14572,17087,18759,19311,20949,22145,23118,24919,26028,26932,27743,35628,37652,38082,38640,54994,57037,58839,104625,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	50591646	50814302	chrX:50591646-50814302	3	-	50596694	50814018	0	10	498,1267,270,181,804,62,2491,135,152,401,	0,4051,6619,10986,15734,35967,41531,46527,104139,222255,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	50591646	50814044	chrX:50591646-50814044	1	-	50596694	50814018	0	9	5318,270,181,804,62,2491,135,152,143,	0,6619,10986,15734,35967,41531,46527,104139,222255,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	50591694	50596237	chrX:50591694-50596237	0	-	50591694	50591694	8553170	3	450,84,348,	0,4003,4195,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	50592364	50643683	chrX:50592364-50643683	1	-	50596694	50638229	0	8	4600,270,181,804,62,2491,135,376,	0,5901,10268,15016,35249,40813,45809,50943,
#Deleted in new
chrX	50649640	50649740	chrX:50649640-50649740	3	+	50649640	50649640	8553170	1	100,	0,
#Partially deleted in new
chrX	50687038	50695937	chrX:50687038-50695937	0	-	50687038	50687038	8553170	2	143,152,	0,8747,
#Deleted in new
chrX	50905437	50905866	chrX:50905437-50905866	7	+	50905437	50905437	16724991	1	429,	0,
#Partially deleted in new
chrX	50910783	50916607	chrX:50910783-50916607	3	+	50910783	50916607	789624	2	328,851,	0,4973,
#Partially deleted in new
chrX	50931113	50931548	chrX:50931113-50931548	7	-	50931113	50931113	16724991	1	435,	0,
#Deleted in new
chrX	51030421	51031357	chrX:51030421-51031357	7	-	51030421	51030421	16724991	1	936,	0,
#Partially deleted in new
chrX	51082817	51091228	chrX:51082817-51091228	7	+	51082817	51082817	16724991	5	208,141,149,83,124,	0,3382,4779,6066,8287,
#Deleted in new
chrX	51162863	51163677	chrX:51162863-51163677	7	+	51162863	51162863	16724991	1	814,	0,
#Partially deleted in new
chrX	51332230	51337525	chrX:51332230-51337525	3	+	51332965	51336239	0	3	137,577,1287,	0,652,4008,
#Partially deleted in new
chrX	51332829	51337525	chrX:51332829-51337525	1	+	51332965	51336239	0	2	630,1287,	0,3409,
#Partially deleted in new
chrX	51356943	51396462	chrX:51356943-51396462	3	-	51356943	51356943	8553170	2	84,367,	0,39152,
#Partially deleted in new
chrX	51396510	51398530	chrX:51396510-51398530	1	+	51396510	51396510	8553170	2	171,415,	0,1605,
#Partially deleted in new
chrX	51396530	51465661	chrX:51396530-51465661	3	+	51396530	51396530	8553170	2	151,255,	0,68876,
#Deleted in new
chrX	51406914	51408843	chrX:51406914-51408843	3	+	51407016	51408528	789624	1	1929,	0,
#Partially deleted in new
chrX	51490010	51496596	chrX:51490010-51496596	3	-	51491748	51496444	789624	2	1739,646,	0,5940,
#Deleted in new
chrX	51617023	51618968	chrX:51617023-51618968	3	-	51618054	51618918	789624	1	1945,	0,
#Deleted in new
chrX	51681211	51682831	chrX:51681211-51682831	3	-	51682012	51682831	789624	1	1620,	0,
#Deleted in new
chrX	51710511	51712131	chrX:51710511-51712131	3	+	51710511	51711330	789624	1	1620,	0,
#Deleted in new
chrX	51743430	51746232	chrX:51743430-51746232	3	+	51743626	51745513	0	1	2802,	0,
#Partially deleted in new
chrX	51803006	51902354	chrX:51803006-51902354	3	+	51894304	51901930	789624	13	111,81,708,669,64,80,92,80,43,63,115,386,209,	0,91262,92046,93402,94201,94540,94788,95107,95278,95574,97175,98546,99139,
#Deleted in new
chrX	51856967	51858066	chrX:51856967-51858066	7	+	51856967	51856967	16724991	1	1099,	0,
#Partially deleted in new
chrX	51870705	51870809	chrX:51870705-51870809	3	-	51870705	51870705	8553170	1	104,	0,
#Partially deleted in new
chrX	51893532	51902354	chrX:51893532-51902354	1	+	51894304	51901930	789624	13	223,74,708,669,64,80,92,80,43,63,115,386,209,	0,743,1520,2876,3675,4014,4262,4581,4752,5048,6649,8020,8613,
#Partially deleted in new
chrX	51893601	51902357	chrX:51893601-51902357	1	+	51894304	51901930	789624	13	154,81,708,669,64,80,92,80,43,63,115,386,212,	0,667,1451,2807,3606,3945,4193,4512,4683,4979,6580,7951,8544,
#Partially deleted in new
chrX	51893638	51902354	chrX:51893638-51902354	1	+	51894304	51901930	789624	14	117,81,168,708,669,64,80,92,80,43,63,115,386,209,	0,630,988,1414,2770,3569,3908,4156,4475,4646,4942,6543,7914,8507,
#Deleted in new
chrX	51893645	51895752	chrX:51893645-51895752	0	+	51893645	51893645	8553170	2	110,700,	0,1407,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	51893648	51902354	chrX:51893648-51902354	0	+	51893648	51893648	8553170	6	107,81,708,1218,2502,802,	0,620,1404,2760,4146,7904,
#Partially deleted in new
chrX	51893657	51902352	chrX:51893657-51902352	0	+	51893657	51893657	8553170	12	98,74,708,669,64,80,399,43,63,115,386,207,	0,618,1395,2751,3550,3889,4137,4627,4923,6524,7895,8488,
#Deleted in new
chrX	51894568	51895702	chrX:51894568-51895702	0	+	51894568	51894568	8553170	2	30,650,	0,484,
#Deleted in new
chrX	51895655	51896474	chrX:51895655-51896474	0	+	51895655	51895655	8553170	3	105,170,66,	0,497,753,
#Partially deleted in new
chrX	51898610	51902354	chrX:51898610-51902354	0	+	51898610	51898610	8553170	3	33,115,802,	0,1571,2942,
#Deleted in new
chrX	51903337	51903850	chrX:51903337-51903850	7	-	51903337	51903337	16724991	2	89,65,	0,448,
#Deleted in new
chrX	51921863	51922499	chrX:51921863-51922499	7	-	51921863	51921863	16724991	1	636,	0,
#Deleted in new
chrX	51923551	51923740	chrX:51923551-51923740	7	+	51923551	51923551	16724991	1	189,	0,
#Deleted in new
chrX	51979222	51980012	chrX:51979222-51980012	7	-	51979222	51979222	16724991	2	453,282,	0,508,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	52050859	52054255	chrX:52050859-52054255	3	-	52050859	52050859	8553170	2	2108,261,	0,3135,
#Partially deleted in new
chrX	52053175	52054938	chrX:52053175-52054938	1	+	52053175	52053175	8553170	4	289,134,76,58,	0,881,1419,1705,
#Partially deleted in new
chrX	52053367	52055684	chrX:52053367-52055684	3	+	52053367	52053367	8553170	4	97,76,132,129,	0,1227,1513,2188,
#Partially deleted in new
chrX	52061826	52069248	chrX:52061826-52069248	3	-	52062028	52068172	789624	13	212,431,115,63,43,80,92,80,64,204,834,241,119,	0,407,1160,2220,2674,2802,3503,3983,4256,4423,5038,6136,7303,
#Partially deleted in new
chrX	52061826	52069198	chrX:52061826-52069198	1	-	52062229	52068172	789624	13	212,443,115,63,43,80,92,80,64,204,834,211,69,	0,395,1160,2220,2674,2802,3503,3983,4256,4423,5038,6136,7303,
#Partially deleted in new
chrX	52061826	52069182	chrX:52061826-52069182	0	-	52061826	52061826	8553170	12	212,443,115,63,43,80,92,80,64,1449,301,53,	0,395,1160,2220,2674,2802,3503,3983,4256,4423,6136,7303,
#Partially deleted in new
chrX	52061826	52066677	chrX:52061826-52066677	0	-	52061826	52061826	8553170	8	212,30,299,1557,80,560,64,428,	0,395,539,1160,2802,3503,4256,4423,
#Partially deleted in new
chrX	52061826	52069219	chrX:52061826-52069219	1	-	52062028	52068172	789624	14	212,431,115,48,63,43,80,92,80,64,204,834,262,90,	0,407,1160,1876,2220,2674,2802,3503,3983,4256,4423,5038,6136,7303,
#Partially deleted in new
chrX	52061826	52064543	chrX:52061826-52064543	0	-	52064104	52064543	789624	5	212,431,115,63,96,	0,407,1160,2220,2621,
#Partially deleted in new
chrX	52061826	52069182	chrX:52061826-52069182	1	-	52062028	52068172	789624	13	212,431,115,63,43,80,92,80,64,204,834,211,53,	0,407,1160,2220,2674,2802,3503,3983,4256,4423,5038,6136,7303,
#Partially deleted in new
chrX	52061838	52064077	chrX:52061838-52064077	0	-	52061838	52061838	8553170	2	144,304,	0,1935,
#Partially deleted in new
chrX	52062555	52065292	chrX:52062555-52065292	0	-	52064685	52065292	789624	6	109,115,63,43,80,124,	0,431,1491,1945,2073,2613,
#Partially deleted in new
chrX	52063346	52063474	chrX:52063346-52063474	3	-	52063346	52063346	789624	1	128,	0,
#Partially deleted in new
chrX	52066044	52066657	chrX:52066044-52066657	0	-	52066044	52066044	8553170	2	102,408,	0,205,
#Partially deleted in new
chrX	52067001	52067605	chrX:52067001-52067605	0	-	52067001	52067001	8553170	2	268,215,	0,389,
#Partially deleted in new
chrX	52067009	52069172	chrX:52067009-52069172	0	-	52067009	52068172	789624	4	392,213,241,43,	0,476,953,2120,
#Partially deleted in new
chrX	52184822	52192266	chrX:52184822-52192266	1	+	52185922	52192066	789624	14	143,262,834,204,64,80,92,80,43,63,48,115,431,210,	0,1048,1574,2819,3126,3383,3851,4564,4729,5163,5522,6171,6608,7234,
#Partially deleted in new
chrX	52184846	52192268	chrX:52184846-52192268	0	+	52184846	52184846	8553170	13	119,241,834,204,64,80,92,80,43,63,115,431,212,	0,1045,1550,2795,3102,3359,3827,4540,4705,5139,6147,6584,7210,
#Partially deleted in new
chrX	52184875	52192268	chrX:52184875-52192268	0	+	52184875	52184875	8553170	14	90,262,834,204,64,80,92,80,43,63,48,115,431,212,	0,995,1521,2766,3073,3330,3798,4511,4676,5110,5469,6118,6555,7181,
#Partially deleted in new
chrX	52184911	52192268	chrX:52184911-52192268	3	+	52185922	52191865	789624	13	54,211,834,204,64,80,92,80,43,63,115,443,212,	0,1010,1485,2730,3037,3294,3762,4475,4640,5074,6082,6519,7145,
#Partially deleted in new
chrX	52184911	52192268	chrX:52184911-52192268	0	+	52184911	52184911	8553170	12	54,301,1449,64,80,92,80,43,63,115,443,212,	0,920,1485,3037,3294,3762,4475,4640,5074,6082,6519,7145,
#Partially deleted in new
chrX	52184911	52192268	chrX:52184911-52192268	0	+	52184911	52184911	8553170	13	54,211,834,204,64,80,92,80,43,63,115,431,212,	0,1010,1485,2730,3037,3294,3762,4475,4640,5074,6082,6519,7145,
#Partially deleted in new
chrX	52184922	52187094	chrX:52184922-52187094	0	+	52184922	52184922	8553170	4	43,241,213,401,	0,969,1474,1771,
#Partially deleted in new
chrX	52186489	52187080	chrX:52186489-52187080	0	+	52186489	52186489	8553170	2	215,255,	0,336,
#Partially deleted in new
chrX	52187632	52192268	chrX:52187632-52192268	0	+	52187632	52187632	8553170	8	213,64,560,80,1557,299,30,212,	0,316,573,1754,1919,3798,4211,4424,
#Partially deleted in new
chrX	52190017	52192256	chrX:52190017-52192256	0	+	52190017	52190017	8553170	2	304,144,	0,2095,
#Partially deleted in new
chrX	52190620	52190748	chrX:52190620-52190748	3	+	52190620	52190620	789624	1	128,	0,
#Partially deleted in new
chrX	52191041	52192184	chrX:52191041-52192184	0	+	52191041	52191041	8553170	4	67,299,18,128,	0,389,802,1015,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	52199839	52203235	chrX:52199839-52203235	3	+	52199839	52199839	8553170	2	261,2108,	0,1288,
#Partially deleted in new
chrX	52326165	52326762	chrX:52326165-52326762	7	+	52326165	52326165	16724991	1	597,	0,
#Partially deleted in new
chrX	52336556	52336642	chrX:52336556-52336642	3	-	52336556	52336556	5263520	1	86,	0,
#Partially deleted in new
chrX	52369029	52375680	chrX:52369029-52375680	3	+	52370014	52375591	789624	5	185,89,106,126,112,	0,977,1537,3514,6539,
#Partially deleted in new
chrX	52382052	52385614	chrX:52382052-52385614	7	+	52382052	52382052	16724991	3	81,106,125,	0,549,3437,
#Partially deleted in new
chrX	52409771	52410432	chrX:52409771-52410432	7	-	52409771	52409771	16724991	2	99,81,	0,580,
#Partially deleted in new
chrX	52422068	52459066	chrX:52422068-52459066	7	+	52422068	52422068	16724991	2	106,131,	0,36867,
#Partially deleted in new
chrX	52448586	52451138	chrX:52448586-52451138	7	-	52448586	52448586	16724991	3	126,106,72,	0,1988,2480,
#Deleted in new
chrX	52480835	52481131	chrX:52480835-52481131	7	+	52480835	52480835	16724991	1	296,	0,
#Deleted in new
chrX	52481514	52483950	chrX:52481514-52483950	7	+	52481514	52481514	16724991	4	66,90,127,347,	0,528,1038,2089,
#Deleted in new
chrX	52485045	52485912	chrX:52485045-52485912	7	-	52485045	52485045	16724991	1	867,	0,
#Partially deleted in new
chrX	52495675	52500812	chrX:52495675-52500812	3	+	52497361	52500724	789624	4	234,142,127,111,	0,1640,2309,5026,
#Partially deleted in new
chrX	52495831	52500812	chrX:52495831-52500812	1	+	52497361	52498082	789624	4	78,158,127,111,	0,1484,2153,4870,
#Partially deleted in new
chrX	52495876	52500812	chrX:52495876-52500812	0	+	52495876	52495876	789624	4	353,142,127,111,	0,1439,2108,4825,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	52497863	52500812	chrX:52497863-52500812	0	+	52497863	52497863	8553170	2	248,111,	0,2838,
#Deleted in new
chrX	52509902	52510182	chrX:52509902-52510182	7	+	52509902	52509902	16724991	1	280,	0,
#Partially deleted in new
chrX	52512076	52517012	chrX:52512076-52517012	0	-	52512076	52512076	789624	4	111,127,142,353,	0,2701,3355,4583,
#Partially deleted in new
chrX	52512076	52517057	chrX:52512076-52517057	1	-	52514806	52515527	789624	4	111,127,158,78,	0,2701,3339,4903,
#Partially deleted in new
chrX	52512076	52517213	chrX:52512076-52517213	1	-	52512164	52515527	789624	4	111,127,142,234,	0,2701,3355,4903,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	52512076	52515025	chrX:52512076-52515025	0	-	52512076	52512076	8553170	2	111,248,	0,2701,
#Partially deleted in new
chrX	52512079	52520803	chrX:52512079-52520803	3	-	52512164	52515527	789624	4	108,127,142,95,	0,2698,3352,8629,
#Deleted in new
chrX	52515167	52517106	chrX:52515167-52517106	0	-	52515167	52515167	8553170	2	406,127,	0,1812,
#Deleted in new
chrX	52531708	52532051	chrX:52531708-52532051	7	-	52531708	52531708	16724991	1	343,	0,
#Partially deleted in new
chrX	52545150	52547695	chrX:52545150-52547695	7	+	52545150	52545150	16724991	3	73,106,126,	0,460,2419,
#Partially deleted in new
chrX	52561768	52562301	chrX:52561768-52562301	7	-	52561768	52561768	16724991	2	112,81,	0,452,
#Deleted in new
chrX	52583988	52586312	chrX:52583988-52586312	7	+	52583988	52583988	16724991	3	75,106,125,	0,545,2199,
#Partially deleted in new
chrX	52598493	52603289	chrX:52598493-52603289	7	+	52598493	52598493	16724991	3	115,96,34,	0,672,4762,
#Partially deleted in new
chrX	52606534	52611758	chrX:52606534-52611758	7	-	52606534	52606534	16724991	5	144,50,96,114,69,	0,2105,4002,4605,5155,
#Partially deleted in new
chrX	52612655	52613523	chrX:52612655-52613523	7	+	52612655	52612655	16724991	2	355,190,	0,678,
#Partially deleted in new
chrX	52624997	52632895	chrX:52624997-52632895	7	+	52624997	52624997	16724991	6	69,115,103,50,137,105,	0,504,1290,3250,5273,7793,
#Partially deleted in new
chrX	52644089	52654900	chrX:52644089-52654900	3	-	52645442	52653472	789624	8	581,105,136,50,96,115,89,139,	0,1349,4171,6263,8162,8780,9314,10672,
#Partially deleted in new
chrX	52655206	52657254	chrX:52655206-52657254	7	+	52655206	52655206	16724991	3	212,349,190,	0,1183,1858,
#Partially deleted in new
chrX	52665230	52665347	chrX:52665230-52665347	7	+	52665230	52665230	16724991	1	117,	0,
#Partially deleted in new
chrX	52672717	52677051	chrX:52672717-52677051	7	+	52672717	52672717	16724991	3	50,136,101,	0,1713,4233,
#Partially deleted in new
chrX	52687362	52687633	chrX:52687362-52687633	7	-	52687362	52687362	16724991	1	271,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	52696895	52707161	chrX:52696895-52707161	1	-	52698028	52705749	789624	9	623,105,146,136,50,96,115,89,50,	0,1088,1890,3547,5685,7601,8232,8785,10216,
#Partially deleted in new
chrX	52696895	52707189	chrX:52696895-52707189	3	-	52697987	52705749	789624	8	623,105,136,50,96,115,89,78,	0,1088,3547,5685,7601,8232,8785,10216,
#Partially deleted in new
chrX	52697230	52702728	chrX:52697230-52702728	0	-	52697230	52697230	8553170	4	288,105,136,148,	0,753,3212,5350,
#Partially deleted in new
chrX	52707601	52709933	chrX:52707601-52709933	7	+	52707601	52707601	16724991	3	214,352,193,	0,1470,2139,
#Partially deleted in new
chrX	52722337	52722524	chrX:52722337-52722524	7	+	52722337	52722337	16724991	1	187,	0,
#Partially deleted in new
chrX	52735900	52736107	chrX:52735900-52736107	7	-	52735900	52735900	16724991	1	207,	0,
#Partially deleted in new
chrX	52751131	52790305	chrX:52751131-52790305	3	+	52752680	52760444	789624	8	143,89,115,96,50,136,105,610,	0,1529,2056,2706,4668,6722,9212,38564,
#Partially deleted in new
chrX	52751240	52761535	chrX:52751240-52761535	1	+	52752680	52760444	789624	8	78,89,115,96,50,136,105,622,	0,1420,1947,2597,4559,6613,9103,9673,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	52751268	52761536	chrX:52751268-52761536	1	+	52752680	52760403	789624	9	50,89,115,96,50,136,146,105,623,	0,1392,1919,2569,4531,6585,8232,9075,9645,
#Partially deleted in new
chrX	52755701	52761325	chrX:52755701-52761325	0	+	52755701	52755701	8553170	4	148,136,105,412,	0,2152,4642,5212,
#Partially deleted in new
chrX	52770808	52771080	chrX:52770808-52771080	7	+	52770808	52770808	16724991	1	272,	0,
#Partially deleted in new
chrX	52781451	52785786	chrX:52781451-52785786	7	-	52781451	52781451	16724991	3	101,136,50,	0,2486,4285,
#Partially deleted in new
chrX	52796143	52798101	chrX:52796143-52798101	3	-	52796487	52797348	789624	2	488,828,	0,1130,
#Deleted in new
chrX	52801399	52801529	chrX:52801399-52801529	7	-	52801399	52801399	16724991	1	130,	0,
#Partially deleted in new
chrX	52812203	52818298	chrX:52812203-52818298	3	+	52812566	52818213	789624	5	58,80,106,126,108,	0,355,936,2888,5987,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	52812203	52818237	chrX:52812203-52818237	0	+	52812566	52814238	789624	5	435,106,156,126,47,	0,936,1985,2888,5987,
#Partially deleted in new
chrX	52812566	52818301	chrX:52812566-52818301	1	+	52812566	52818213	789624	4	72,106,126,111,	0,573,2525,5624,
#Partially deleted in new
chrX	52814910	52818301	chrX:52814910-52818301	0	+	52814910	52814910	8553170	2	307,111,	0,3280,
#Partially deleted in new
chrX	52824268	52829267	chrX:52824268-52829267	7	-	52824268	52824268	16724991	3	125,103,79,	0,3772,4920,
#Deleted in new
chrX	52832703	52833899	chrX:52832703-52833899	7	-	52832703	52832703	16724991	1	1196,	0,
#Deleted in new
chrX	52862524	52867301	chrX:52862524-52867301	1	-	52862617	52867133	789624	5	116,126,106,89,52,	0,2250,3908,4528,4725,
#Deleted in new
chrX	52862527	52868068	chrX:52862527-52868068	3	-	52862617	52867133	789624	5	113,126,106,89,63,	0,2247,3905,4525,5478,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	52891305	52907374	chrX:52891305-52907374	2	+	52907225	52907374	789624	4	425,74,93,266,	0,8162,9262,15803,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	52891599	52907393	chrX:52891599-52907393	0	+	52907225	52907393	789624	4	131,483,93,285,	0,7459,8968,15509,
#Partially deleted in new
chrX	52896940	52907236	chrX:52896940-52907236	0	+	52907225	52907236	8553170	4	250,74,93,128,	0,2527,3627,10168,
#Partially deleted in new
chrX	52897305	52907613	chrX:52897305-52907613	0	+	52907225	52907613	789624	4	104,74,93,505,	0,2162,3262,9803,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	52897312	52908560	chrX:52897312-52908560	1	+	52907225	52907867	789624	3	97,483,1452,	0,1746,9796,
#Partially deleted in new
chrX	52897399	52908556	chrX:52897399-52908556	1	+	52907225	52907867	789624	4	1327,74,93,1448,	0,2068,3168,9709,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	52898549	52908560	chrX:52898549-52908560	1	+	52907225	52907867	789624	3	992,93,1452,	0,2018,8559,
#Partially deleted in new
chrX	52899382	52908560	chrX:52899382-52908560	1	+	52907225	52907867	789624	3	159,90,1452,	0,1188,7726,
#Partially deleted in new
chrX	52926401	52958494	chrX:52926401-52958494	0	-	52947946	52948588	789624	4	1364,79,1102,90,	0,20193,21202,32003,
#Partially deleted in new
chrX	52947253	52995464	chrX:52947253-52995464	1	-	52947946	52948588	789624	3	1452,74,159,	0,9019,48052,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	52947253	52958501	chrX:52947253-52958501	1	-	52947946	52948588	789624	3	1452,483,97,	0,9019,11151,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	52947253	52958484	chrX:52947253-52958484	1	-	52947946	52948588	789624	3	1452,93,2212,	0,7900,9019,
#Partially deleted in new
chrX	52947257	52958414	chrX:52947257-52958414	1	-	52947946	52948588	789624	4	1448,93,74,1327,	0,7896,9015,9830,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	52947257	52995472	chrX:52947257-52995472	1	-	52947946	52948588	789624	5	1448,93,483,151,58,	0,7896,9015,9830,48157,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	52947257	52995472	chrX:52947257-52995472	1	-	52947946	52948588	789624	3	1448,483,167,	0,9015,48048,
#Partially deleted in new
chrX	52947257	52995472	chrX:52947257-52995472	3	-	52947946	52948588	789624	5	1448,90,74,152,167,	0,7896,9015,16826,48048,
#Partially deleted in new
chrX	52948034	52957659	chrX:52948034-52957659	0	-	52948034	52948588	789624	4	671,93,74,58,	0,7119,8238,9567,
#Partially deleted in new
chrX	52948194	52958446	chrX:52948194-52958446	0	-	52948194	52948588	789624	5	511,90,74,36,42,	0,6959,8078,8893,10210,
#Partially deleted in new
chrX	52948208	52958873	chrX:52948208-52958873	0	-	52948208	52948588	789624	4	497,93,74,250,	0,6945,8064,10415,
#Partially deleted in new
chrX	52948253	52995455	chrX:52948253-52995455	0	-	52948253	52948588	789624	3	452,74,41,	0,8019,47161,
#Partially deleted in new
chrX	52948342	52958518	chrX:52948342-52958518	0	-	52948342	52948588	789624	4	363,93,74,114,	0,6811,7930,10062,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	52948420	52964214	chrX:52948420-52964214	0	-	52948420	52948588	789624	4	285,93,483,131,	0,6733,7852,15663,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	52948472	52995453	chrX:52948472-52995453	0	-	52948472	52948588	789624	4	233,93,483,39,	0,6681,7800,46942,
#Partially deleted in new
chrX	52948483	52995443	chrX:52948483-52995443	0	-	52948483	52948588	789624	5	222,93,74,151,29,	0,6670,7789,8604,46931,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	52948576	52957247	chrX:52948576-52957247	0	-	52948576	52948588	8553170	4	129,93,483,160,	0,6577,7696,8511,
#Partially deleted in new
chrX	52948578	52995372	chrX:52948578-52995372	0	-	52948578	52948588	8553170	5	127,90,74,152,67,	0,6575,7694,15505,46727,
#Partially deleted in new
chrX	52948594	52995455	chrX:52948594-52995455	0	-	52948594	52948594	8553170	4	111,93,74,41,	0,6559,7678,46820,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	52955154	52995472	chrX:52955154-52995472	0	-	52955154	52955154	8553170	4	92,483,151,58,	0,1118,1933,40260,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	52956278	52964508	chrX:52956278-52964508	0	-	52956278	52956278	8553170	2	68,425,	0,7805,
#Partially deleted in new
chrX	52965449	52995472	chrX:52965449-52995472	0	-	52965449	52965449	8553170	2	532,58,	0,29965,
#Partially deleted in new
chrX	52965572	52995472	chrX:52965572-52995472	0	-	52965572	52965572	8553170	2	409,167,	0,29733,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	53049090	53080615	chrX:53049090-53080615	3	+	53076621	53077743	789624	2	394,4091,	0,27434,
#Deleted in new
chrX	53065052	53065548	chrX:53065052-53065548	7	-	53065052	53065052	16724991	1	496,	0,
#Partially deleted in new
chrX	53082366	53088540	chrX:53082366-53088540	3	+	53082498	53087939	789624	7	939,78,112,146,95,680,765,	0,2178,2388,2587,2860,3264,5409,
#Deleted in new
chrX	53082366	53086413	chrX:53082366-53086413	0	+	53082366	53082366	8553170	4	939,335,146,1187,	0,2165,2587,2860,
#Deleted in new
chrX	53082380	53086118	chrX:53082380-53086118	0	+	53082498	53086118	789624	3	286,95,488,	0,2846,3250,
#Deleted in new
chrX	53082992	53085839	chrX:53082992-53085839	0	+	53082992	53084588	789624	6	313,91,112,146,95,209,	0,1539,1762,1961,2234,2638,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	53083122	53088539	chrX:53083122-53088539	0	+	53083122	53083122	8553170	2	183,3995,	0,1422,
#Deleted in new
chrX	53084698	53085943	chrX:53084698-53085943	0	+	53084698	53084698	8553170	4	168,146,95,313,	0,255,528,932,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	53093709	53094858	chrX:53093709-53094858	3	-	53093709	53093709	8553170	2	40,575,	0,574,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	53094144	53123742	chrX:53094144-53123742	0	+	53094144	53094144	8553170	3	140,75,274,	0,255,29324,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	53094147	53170914	chrX:53094147-53170914	0	+	53094147	53094147	8553170	4	137,75,137,3994,	0,252,5324,72773,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	53094147	53127445	chrX:53094147-53127445	1	+	53124272	53124503	789624	3	137,137,3977,	0,5324,29321,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	53094156	53142707	chrX:53094156-53142707	0	+	53094156	53094156	789624	3	128,75,860,	0,243,47691,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	53094188	53143451	chrX:53094188-53143451	2	+	53094188	53094188	8553170	3	96,247,853,	0,47659,48410,
#Deleted in new
chrX	53113017	53113274	chrX:53113017-53113274	7	-	53113017	53113017	16724991	1	257,	0,
#Partially deleted in new
chrX	53142831	53143913	chrX:53142831-53143913	7	-	53142831	53142831	16724991	1	1082,	0,
#Deleted in new
chrX	53164390	53164557	chrX:53164390-53164557	7	-	53164390	53164390	16724991	1	167,	0,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chrX	53191320	53225422	chrX:53191320-53225422	1	-	53192743	53224889	0	24	1517,139,70,600,138,180,139,359,106,148,125,182,195,120,163,182,159,120,159,182,124,135,171,683,	0,2177,2461,2818,3610,3910,4595,5365,6450,7169,7443,7656,10229,10533,19093,19355,20176,20466,23368,24474,24753,25822,26475,33419,
#Partially deleted in new
chrX	53192151	53225422	chrX:53192151-53225422	3	-	53192966	53224889	0	26	1181,200,79,600,138,180,139,359,106,148,125,182,195,120,163,182,159,120,159,182,124,135,171,123,78,683,	0,1285,1621,1987,2779,3079,3764,4534,5619,6338,6612,6825,9398,9702,18262,18524,19345,19635,22537,23643,23922,24991,25644,26124,28687,32588,
#Partially deleted in new
chrX	53192256	53225176	chrX:53192256-53225176	1	-	53192966	53224889	0	26	1076,200,79,600,138,180,139,359,106,148,125,182,195,120,163,182,159,120,159,182,124,132,171,123,78,437,	0,1180,1516,1882,2674,2974,3659,4429,5514,6233,6507,6720,9293,9597,18157,18419,19240,19530,22432,23538,23817,24886,25539,26019,28582,32483,
#Partially deleted in new
chrX	53192928	53225422	chrX:53192928-53225422	1	-	53192966	53224889	0	26	404,200,70,600,138,180,139,359,106,148,125,182,195,120,163,182,159,120,159,182,124,135,171,123,78,683,	0,508,853,1210,2002,2302,2987,3757,4842,5561,5835,6048,8621,8925,17485,17747,18568,18858,21760,22866,23145,24214,24867,25347,27910,31811,
#Partially deleted in new
chrX	53192928	53225422	chrX:53192928-53225422	1	-	53192966	53224889	0	25	404,200,70,600,138,180,139,359,106,148,125,182,195,120,163,182,159,120,159,182,124,135,171,78,683,	0,508,853,1210,2002,2302,2987,3757,4842,5561,5835,6048,8621,8925,17485,17747,18568,18858,21760,22866,23145,24214,24867,27910,31811,
#Deleted in new
chrX	53195410	53195488	chrX:53195410-53195488	3	-	53195410	53195410	5263520	1	78,	0,
#Deleted in new
chrX	53197656	53198566	chrX:53197656-53198566	0	-	53197656	53197656	8553170	2	220,77,	0,833,
#Partially deleted in new
chrX	53198489	53211658	chrX:53198489-53211658	0	-	53198489	53198489	8553170	7	399,182,195,120,163,182,162,	0,487,3060,3364,11924,12186,13007,
#Deleted in new
chrX	53198888	53198945	chrX:53198888-53198945	3	-	53198888	53198888	5263520	1	57,	0,
#Partially deleted in new
chrX	53201278	53210547	chrX:53201278-53210547	0	-	53201278	53201278	8553170	3	466,120,134,	0,575,9135,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	53201303	53202773	chrX:53201303-53202773	0	-	53201303	53201303	8553170	2	441,920,	0,550,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	53212407	53214679	chrX:53212407-53214679	3	-	53212407	53212407	8553170	2	332,423,	0,1849,
#Partially deleted in new
chrX	53215713	53217149	chrX:53215713-53217149	0	-	53215713	53215713	8553170	3	263,124,7,	0,360,1429,
#Partially deleted in new
chrX	53217809	53225208	chrX:53217809-53225208	0	-	53221718	53224889	789624	5	157,123,78,43,469,	0,466,3029,3878,6930,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	53217828	53218737	chrX:53217828-53218737	0	-	53217828	53217828	8553170	2	138,462,	0,447,
#Partially deleted in new
chrX	53217852	53221818	chrX:53217852-53221818	0	-	53217852	53217852	8553170	4	114,123,78,131,	0,423,2986,3835,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	53218314	53225194	chrX:53218314-53225194	0	-	53218640	53224889	789624	4	84,149,78,455,	0,249,2524,6425,
#Deleted in new
chrX	53221704	53225198	chrX:53221704-53225198	0	-	53221718	53224889	789624	2	89,459,	0,3035,
#Partially deleted in new
chrX	53225827	53248156	chrX:53225827-53248156	0	-	53227823	53248156	789624	9	2038,50,174,162,100,126,140,167,43,	0,9955,10494,12317,13367,15956,17504,21141,22286,
#Partially deleted in new
chrX	53225830	53238286	chrX:53225830-53238286	0	-	53227845	53238286	789624	3	2035,174,142,	0,10491,12314,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	53228822	53250527	chrX:53228822-53250527	0	-	53231732	53250527	789624	11	3048,50,174,162,100,126,140,167,123,162,249,	0,6960,7499,9322,10372,12961,14509,18146,19291,19898,21456,
#Partially deleted in new
chrX	53231061	53241861	chrX:53231061-53241861	0	-	53231814	53241861	789624	5	809,174,162,100,78,	0,5260,7083,8133,10722,
#Partially deleted in new
chrX	53232873	53321319	chrX:53232873-53321319	1	-	53235170	53321123	789624	14	2311,174,162,100,126,140,167,123,162,896,402,262,30,903,	0,3448,5271,6321,8910,10458,14095,15240,15847,17405,21656,22926,59021,87543,
#Partially deleted in new
chrX	53232875	53321324	chrX:53232875-53321324	1	-	53234218	53321123	0	15	2309,50,174,162,100,126,140,167,123,162,896,402,262,30,908,	0,2907,3446,5269,6319,8908,10456,14093,15238,15845,17403,21654,22924,59019,87541,
#Partially deleted in new
chrX	53232875	53321350	chrX:53232875-53321350	1	-	53234218	53321123	0	15	2309,50,174,162,100,126,140,167,123,162,896,402,262,30,934,	0,2907,3446,5269,6319,8908,10456,14093,15238,15845,17403,21654,22924,59019,87541,
#Partially deleted in new
chrX	53234109	53281614	chrX:53234109-53281614	3	-	53235170	53281521	0	14	1075,174,162,100,126,140,167,123,162,896,402,262,96,119,	0,2212,4035,5085,7674,9222,12859,14004,14611,16169,20420,21690,45454,47386,
#Partially deleted in new
chrX	53235095	53239584	chrX:53235095-53239584	0	-	53235095	53235095	8553170	5	89,174,162,100,45,	0,1226,3049,4099,4444,
#Partially deleted in new
chrX	53236395	53247007	chrX:53236395-53247007	0	-	53237496	53247007	789624	7	100,96,162,100,126,140,39,	0,1025,1749,2799,5388,6936,10573,
#Partially deleted in new
chrX	53237782	53239589	chrX:53237782-53239589	0	-	53237782	53237782	8553170	3	524,100,50,	0,1412,1757,
#Partially deleted in new
chrX	53251094	53281612	chrX:53251094-53281612	0	-	53251094	53281521	789624	4	80,402,262,117,	0,3435,4705,30401,
#Partially deleted in new
chrX	53266323	53281535	chrX:53266323-53281535	1	-	53266757	53281521	789624	4	441,96,96,40,	0,645,13240,15172,
#Partially deleted in new
chrX	53266327	53281572	chrX:53266327-53281572	0	-	53266327	53266327	8553170	3	557,96,77,	0,13236,15168,
#Partially deleted in new
chrX	53266327	53281598	chrX:53266327-53281598	1	-	53266964	53281521	0	3	737,96,103,	0,13236,15168,
#Partially deleted in new
chrX	53266328	53281594	chrX:53266328-53281594	1	-	53266964	53281521	789624	2	736,99,	0,15167,
#Partially deleted in new
chrX	53266641	53281581	chrX:53266641-53281581	1	-	53266964	53281521	789624	3	423,213,86,	0,12922,14854,
#Partially deleted in new
chrX	53266707	53291916	chrX:53266707-53291916	0	-	53266964	53291916	789624	3	357,96,22,	0,12856,25187,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	53279154	53281578	chrX:53279154-53281578	0	-	53279154	53279154	8553170	2	505,83,	0,2341,
#Partially deleted in new
chrX	53322989	53323822	chrX:53322989-53323822	7	+	53322989	53322989	16724991	1	833,	0,
#Partially deleted in new
chrX	53337782	53337973	chrX:53337782-53337973	7	-	53337782	53337782	16724991	2	138,42,	0,149,
#Deleted in new
chrX	53340985	53341505	chrX:53340985-53341505	7	+	53340985	53340985	16724991	1	520,	0,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chrX	53374148	53422728	chrX:53374148-53422728	3	-	53380102	53422600	789624	25	6038,111,70,152,155,157,111,154,146,142,107,117,138,147,180,186,208,83,141,259,239,204,113,189,237,	0,6471,6869,8083,8357,8948,20629,22078,22323,25440,29417,29628,30863,31096,31344,31622,34913,35272,37612,37846,38751,39083,40609,40832,48343,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chrX	53374148	53422728	chrX:53374148-53422728	1	-	53380102	53421937	789624	26	6038,111,70,152,155,157,111,154,146,142,107,117,138,147,180,186,208,83,141,259,239,204,113,189,146,237,	0,6471,6869,8083,8357,8948,20629,22078,22323,25440,29417,29628,30863,31096,31344,31622,34913,35272,37612,37846,38751,39083,40609,40832,47746,48343,
#Partially deleted in new
chrX	53380619	53396378	chrX:53380619-53396378	0	-	53380619	53396378	789624	6	111,152,155,157,111,152,	0,1612,1886,2477,14158,15607,
#Deleted in new
chrX	53381677	53382646	chrX:53381677-53382646	0	-	53381677	53381677	8553170	2	706,141,	0,828,
#Deleted in new
chrX	53405672	53405765	chrX:53405672-53405765	3	-	53405672	53405672	5263520	1	93,	0,
#Partially deleted in new
chrX	53411994	53422669	chrX:53411994-53422669	0	-	53413379	53422600	789624	4	259,239,204,178,	0,905,1237,10497,
#Partially deleted in new
chrX	53412899	53422017	chrX:53412899-53422017	0	-	53412899	53421937	789624	5	239,204,113,189,123,	0,332,1858,2081,8995,
#Partially deleted in new
chrX	53422689	53428627	chrX:53422689-53428627	0	+	53426276	53428627	789624	5	231,89,117,82,345,	0,624,3587,5313,5593,
#Partially deleted in new
chrX	53422855	53431120	chrX:53422855-53431120	1	+	53426276	53430794	789624	6	149,89,117,82,119,725,	0,458,3421,5147,6998,7540,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	53422889	53429828	chrX:53422889-53429828	1	+	53426276	53428662	789624	5	115,89,117,82,1546,	0,424,3387,5113,5393,
#Partially deleted in new
chrX	53422940	53431115	chrX:53422940-53431115	3	+	53426276	53430988	789624	8	64,89,117,82,345,119,395,209,	0,373,3336,5062,5342,6913,7455,7966,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	53428462	53429278	chrX:53428462-53429278	0	+	53428462	53428462	8553170	2	165,94,	0,722,
#Partially deleted in new
chrX	53431257	53434373	chrX:53431257-53434373	3	-	53431403	53434345	0	6	337,109,129,165,165,55,	0,540,730,989,2464,3061,
#Partially deleted in new
chrX	53431257	53434356	chrX:53431257-53434356	1	-	53431403	53434345	0	6	337,82,129,165,165,38,	0,567,730,989,2464,3061,
#Deleted in new
chrX	53431257	53432322	chrX:53431257-53432322	0	-	53431257	53431257	8553170	3	337,143,76,	0,716,989,
#Partially deleted in new
chrX	53431262	53434350	chrX:53431262-53434350	1	-	53431570	53434345	789624	5	332,129,165,165,32,	0,725,984,2459,3056,
#Partially deleted in new
chrX	53431858	53434336	chrX:53431858-53434336	0	-	53431858	53431858	8553170	5	48,129,165,165,159,	0,129,388,1863,2319,
#Deleted in new
chrX	53456272	53457029	chrX:53456272-53457029	7	-	53456272	53456272	16724991	1	757,	0,
#Partially deleted in new
chrX	53462208	53462310	chrX:53462208-53462310	3	+	53462208	53462208	8553170	1	102,	0,
#Partially deleted in new
chrX	53532095	53684169	chrX:53532095-53684169	1	-	53533308	53654107	0	83	1316,191,182,118,106,288,141,118,246,156,97,128,203,133,157,122,601,547,103,289,215,131,256,288,46,155,90,179,229,169,134,99,76,149,173,183,212,215,67,146,168,196,359,160,177,82,128,153,270,96,123,231,238,123,217,192,95,134,246,177,58,212,92,178,107,81,102,106,141,128,151,101,100,69,48,78,63,153,207,99,69,138,296,	0,1911,2420,3288,4051,4284,5460,6241,6739,7561,10347,11745,12464,12933,14340,14608,15577,16863,18570,18805,19170,20215,20542,22537,25286,26559,26875,27258,28092,29660,30015,30735,31650,32478,32971,36596,37520,41654,43059,43547,44804,48735,51462,52090,52916,54394,54686,56286,57451,58308,58904,60302,61268,62403,63091,68022,70468,71272,72493,75427,76756,82438,83648,84874,85244,92499,93061,95314,95643,96397,96656,97420,98839,99318,99471,100391,102140,113215,115272,116116,121967,147953,151778,
#Partially deleted in new
chrX	53532095	53549505	chrX:53532095-53549505	0	-	53533308	53549505	789624	18	1316,191,182,118,106,288,141,118,246,156,97,83,203,133,157,122,601,547,	0,1911,2420,3288,4051,4284,5460,6241,6739,7561,10347,11790,12464,12933,14340,14608,15577,16863,
#Partially deleted in new
chrX	53532095	53654107	chrX:53532095-53654107	1	-	53533308	53654107	0	81	1316,191,182,118,106,288,141,118,246,156,97,128,203,133,157,122,601,547,103,289,215,131,256,288,46,155,90,179,229,169,134,99,76,149,173,183,212,215,67,146,168,196,359,160,177,82,128,153,270,96,123,231,238,123,217,192,68,134,246,177,58,212,92,178,107,81,102,106,141,128,151,101,100,69,48,78,63,153,207,99,45,	0,1911,2420,3288,4051,4284,5460,6241,6739,7561,10347,11745,12464,12933,14340,14608,15577,16863,18570,18805,19170,20215,20542,22537,25286,26559,26875,27258,28092,29660,30015,30735,31650,32478,32971,36596,37520,41654,43059,43547,44804,48735,51462,52090,52916,54394,54686,56286,57451,58308,58904,60302,61268,62403,63091,68022,70495,71272,72493,75427,76756,82438,83648,84874,85244,92499,93061,95314,95643,96397,96656,97420,98839,99318,99471,100391,102140,113215,115272,116116,121967,
#Partially deleted in new
chrX	53532097	53686729	chrX:53532097-53686729	3	-	53533308	53654107	0	84	1314,191,182,118,106,288,141,118,246,156,97,128,203,133,157,122,601,547,103,289,215,131,256,288,46,155,90,179,229,169,134,99,76,149,173,183,212,215,67,146,168,196,359,160,177,82,128,153,270,96,123,231,238,123,217,192,95,134,246,177,58,212,92,178,107,81,102,106,141,128,151,101,100,69,48,78,63,153,207,99,69,138,99,142,	0,1909,2418,3286,4049,4282,5458,6239,6737,7559,10345,11743,12462,12931,14338,14606,15575,16861,18568,18803,19168,20213,20540,22535,25284,26557,26873,27256,28090,29658,30013,30733,31648,32476,32969,36594,37518,41652,43057,43545,44802,48733,51460,52088,52914,54392,54684,56284,57449,58306,58902,60300,61266,62401,63089,68020,70466,71270,72491,75425,76754,82436,83646,84872,85242,92497,93059,95312,95641,96395,96654,97418,98837,99316,99469,100389,102138,113213,115270,116114,121965,147951,154172,154490,
#Deleted in new
chrX	53533541	53534659	chrX:53533541-53534659	0	-	53533541	53533541	8553170	2	656,144,	0,974,
#Deleted in new
chrX	53535926	53536651	chrX:53535926-53536651	0	-	53535926	53535926	8553170	2	326,272,	0,453,
#Deleted in new
chrX	53537263	53538467	chrX:53537263-53538467	0	-	53537263	53537263	8553170	2	433,131,	0,1073,
#Partially deleted in new
chrX	53539656	53542872	chrX:53539656-53542872	0	-	53539656	53539656	8553170	2	156,430,	0,2786,
#Deleted in new
chrX	53542442	53547809	chrX:53542442-53547809	0	-	53543943	53547809	789624	6	97,83,133,157,122,137,	0,1443,2586,3993,4261,5230,
#Deleted in new
chrX	53543709	53548052	chrX:53543709-53548052	0	-	53543709	53543709	8553170	6	259,203,133,157,122,380,	0,850,1319,2726,2994,3963,
#Deleted in new
chrX	53556222	53556341	chrX:53556222-53556341	3	-	53556222	53556222	5263520	1	119,	0,
#Deleted in new
chrX	53557191	53557274	chrX:53557191-53557274	3	-	53557191	53557191	5263520	1	83,	0,
#Partially deleted in new
chrX	53584210	53686728	chrX:53584210-53686728	0	-	53584210	53584210	8553170	41	85,177,82,128,153,270,96,123,231,238,123,217,192,95,134,246,177,58,212,92,178,107,81,102,106,141,128,151,101,100,69,48,78,63,153,207,99,69,138,99,141,	0,801,2279,2571,4171,5336,6193,6789,8187,9153,10288,10976,15907,18353,19157,20378,23312,24641,30323,31533,32759,33129,40384,40946,43199,43528,44282,44541,45305,46724,47203,47356,48276,50025,61100,63157,64001,69852,95838,102059,102377,
#Partially deleted in new
chrX	53615769	53625478	chrX:53615769-53625478	0	-	53615769	53615769	8553170	5	66,178,107,81,322,	0,1200,1570,8825,9387,
#Partially deleted in new
chrX	53624619	53628526	chrX:53624619-53628526	0	-	53624619	53628526	789624	6	56,102,249,106,141,34,	0,537,1166,2790,3119,3873,
#Partially deleted in new
chrX	53630872	53631752	chrX:53630872-53631752	0	-	53630872	53630872	8553170	2	162,339,	0,541,
#Partially deleted in new
chrX	53647440	53684169	chrX:53647440-53684169	0	-	53647440	53654107	789624	6	134,99,69,138,136,296,	0,771,6622,32608,33118,36433,
#Deleted in new
chrX	53759025	53759204	chrX:53759025-53759204	7	+	53759025	53759025	16724991	1	179,	0,
#Partially deleted in new
chrX	53768985	53769219	chrX:53768985-53769219	7	-	53768985	53768985	16724991	1	234,	0,
#Partially deleted in new
chrX	53807775	53808623	chrX:53807775-53808623	7	+	53807775	53807775	16724991	2	292,235,	0,613,
#Deleted in new
chrX	53825886	53826309	chrX:53825886-53826309	7	+	53825886	53825886	16724991	1	423,	0,
#Partially deleted in new
chrX	53936675	54044174	chrX:53936675-54044174	3	-	53939157	54042728	0	22	2571,337,110,96,314,134,86,179,104,303,90,92,107,88,163,187,142,161,109,86,190,413,	0,3504,7458,26168,48238,49140,50402,51090,56060,56925,59017,63194,65479,65919,74446,77701,79919,80985,85583,86082,105955,107086,
#Partially deleted in new
chrX	53936675	54045249	chrX:53936675-54045249	1	-	53939157	54044890	0	22	2571,337,110,96,314,134,86,179,104,303,90,92,107,88,163,187,142,161,109,86,190,375,	0,3504,7458,26168,48238,49140,50402,51090,56060,56925,59017,63194,65479,65919,74446,77701,79919,80985,85583,86082,105955,108199,
#Partially deleted in new
chrX	53936681	54044174	chrX:53936681-54044174	1	-	53937980	54042728	0	22	1378,85,337,110,96,314,134,86,179,104,90,92,107,88,163,187,142,161,109,86,190,413,	0,2480,3498,7452,26162,48232,49134,50396,51084,56054,59011,63188,65473,65913,74440,77695,79913,80979,85577,86076,105949,107080,
#Partially deleted in new
chrX	53937497	54022262	chrX:53937497-54022262	0	-	53937980	54022262	789624	20	562,85,337,110,96,314,134,86,179,104,303,90,92,107,88,163,187,142,161,4,	0,1664,2682,6636,25346,47416,48318,49580,50268,55238,56103,58195,62372,64657,65097,73624,76879,79097,80163,84761,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	53940368	53944564	chrX:53940368-53944564	0	-	53940368	53940368	8553170	2	148,431,	0,3765,
#Partially deleted in new
chrX	53942617	54014449	chrX:53942617-54014449	0	-	53943363	54014449	789624	15	785,110,96,314,134,86,179,104,303,90,92,107,88,163,73,	0,1516,20226,42296,43198,44460,45148,50118,50983,53075,57252,59537,59977,68504,71759,
#Partially deleted in new
chrX	53943255	54043194	chrX:53943255-54043194	1	-	53943363	54042728	0	22	147,110,96,314,40,43,86,179,104,303,90,92,107,88,163,187,142,161,109,86,190,84,	0,878,19588,41658,42489,42651,43822,44510,49480,50345,52437,56614,58899,59339,67866,71121,73339,74405,79003,79502,99375,99855,
#Partially deleted in new
chrX	53987786	53993009	chrX:53987786-53993009	0	-	53987786	53987786	8553170	2	158,274,	0,4949,
#Partially deleted in new
chrX	53992793	54011203	chrX:53992793-54011203	0	-	53995139	54011203	789624	7	46,75,90,92,107,88,82,	0,2337,2899,7076,9361,9801,18328,
#Partially deleted in new
chrX	53992801	54002670	chrX:53992801-54002670	0	-	53992801	54002670	789624	5	38,90,92,107,76,	0,2891,7068,9353,9793,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	53999486	54014493	chrX:53999486-54014493	0	-	53999486	53999486	8553170	5	475,107,88,163,117,	0,2668,3108,11635,14890,
#Partially deleted in new
chrX	54017736	54042986	chrX:54017736-54042986	0	-	54017736	54042728	789624	5	85,109,86,206,79,	0,4522,5021,24894,25171,
#Partially deleted in new
chrX	54017769	54048958	chrX:54017769-54048958	0	-	54017769	54042728	789624	6	52,109,86,179,75,54,	0,4489,4988,24861,27105,31135,
#Partially deleted in new
chrX	54017770	54044062	chrX:54017770-54044062	0	-	54017770	54042728	789624	5	51,109,86,190,251,	0,4488,4987,24860,26041,
#Partially deleted in new
chrX	54017778	54048935	chrX:54017778-54048935	0	-	54017778	54044890	789624	6	43,109,86,190,75,31,	0,4480,4979,24852,27096,31126,
#Partially deleted in new
chrX	54022258	54042990	chrX:54022258-54042990	0	-	54022258	54042728	789624	3	109,86,360,	0,499,20372,
#Partially deleted in new
chrX	54022258	54043147	chrX:54022258-54043147	0	-	54022258	54042728	789624	4	109,86,190,90,	0,499,20372,20799,
#Partially deleted in new
chrX	54039629	54042716	chrX:54039629-54042716	0	-	54039629	54039629	8553170	2	443,86,	0,3001,
#Partially deleted in new
chrX	54068323	54183255	chrX:54068323-54183255	3	-	54073032	54183198	789624	16	4964,58,139,202,210,115,250,172,274,281,77,100,129,83,247,756,	0,11908,12998,17391,19431,22988,48221,64368,65449,66507,67204,68167,82921,89365,91046,114176,
#Partially deleted in new
chrX	54072252	54183255	chrX:54072252-54183255	1	-	54073223	54183198	789624	14	1035,58,139,115,250,172,274,281,77,100,129,83,247,756,	0,7979,9069,19059,44292,60439,61520,62578,63275,64238,78992,85436,87117,110247,
#Partially deleted in new
chrX	54147371	54147659	chrX:54147371-54147659	7	+	54147371	54147371	16724991	1	288,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	54171541	54182778	chrX:54171541-54182778	0	-	54171541	54171541	8553170	2	358,279,	0,10958,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	54173788	54183281	chrX:54173788-54183281	1	-	54174128	54183198	789624	2	358,782,	0,8711,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chrX	54192822	54358005	chrX:54192822-54358005	1	-	54198323	54333673	0	23	5831,203,212,614,131,91,938,138,52,156,117,148,65,150,194,295,220,89,158,221,173,656,320,	0,9168,39986,44115,45519,46186,55874,57171,58576,58709,61136,62917,66451,100065,100311,101730,105352,108948,115099,116272,118296,140314,164863,
#Boundary problem: need 24, got 0, diff 24, mapped 0.0
chrX	54192824	54358005	chrX:54192824-54358005	3	-	54198323	54333673	0	24	5829,203,30,212,614,131,232,938,138,52,156,117,148,65,150,194,295,220,89,158,221,173,656,320,	0,9166,35889,39984,44113,45517,46043,55872,57169,58574,58707,61134,62915,66449,100063,100309,101728,105350,108946,115097,116270,118294,140312,164861,
#Partially deleted in new
chrX	54198323	54333673	chrX:54198323-54333673	1	-	54198323	54333673	0	23	330,203,30,212,614,131,232,938,138,52,156,117,148,65,150,194,295,220,89,158,221,173,537,	0,3667,30390,34485,38614,40018,40544,50373,51670,53075,53208,55635,57416,60950,94564,94810,96229,99851,103447,109598,110771,112795,134813,
#Partially deleted in new
chrX	54198323	54333673	chrX:54198323-54333673	1	-	54198323	54333673	789624	23	330,201,9,232,614,131,232,938,138,52,156,117,148,65,150,194,295,220,89,158,221,173,537,	0,3667,34452,34465,38614,40018,40544,50373,51670,53075,53208,55635,57416,60950,94564,94810,96229,99851,103447,109598,110771,112795,134813,
#Partially deleted in new
chrX	54223323	54224062	chrX:54223323-54224062	7	+	54223323	54223323	16724991	1	739,	0,
#Partially deleted in new
chrX	54333177	54358642	chrX:54333177-54358642	0	-	54333177	54333673	789624	2	615,100,	0,25365,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	54343545	54343652	chrX:54343545-54343652	3	+	54343545	54343545	8553170	1	107,	0,
#Partially deleted in new
chrX	54440400	54445487	chrX:54440400-54445487	3	+	54440421	54444550	789624	5	102,91,92,177,1072,	0,289,2999,3607,4015,
#Partially deleted in new
chrX	54445453	54496166	chrX:54445453-54496166	3	-	54446108	54495432	789624	18	961,144,162,126,102,31,80,93,147,59,139,157,149,90,442,178,174,1041,	0,1857,3352,3689,4205,4817,9994,10238,10766,11055,19997,20242,22330,23333,24562,25129,25860,49672,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chrX	54530210	54561071	chrX:54530210-54561071	3	+	54532566	54560602	789624	16	92,66,62,108,117,84,136,104,145,88,175,143,137,128,220,552,	0,2309,8829,9924,11062,12744,12996,14012,18018,20752,21357,21621,22081,24354,28225,30309,
#Partially deleted in new
chrX	54530241	54560763	chrX:54530241-54560763	1	+	54532566	54560602	789624	16	178,66,62,108,117,84,136,104,145,88,175,143,137,128,220,244,	0,2278,8798,9893,11031,12713,12965,13981,17987,20721,21326,21590,22050,24323,28194,30278,
#Partially deleted in new
chrX	54530312	54544322	chrX:54530312-54544322	0	+	54530312	54530312	8553170	9	107,66,62,108,117,84,136,115,100,	0,2207,8727,9822,10960,12642,12894,13693,13910,
#Deleted in new
chrX	54671984	54672638	chrX:54671984-54672638	7	+	54671984	54671984	16724991	1	654,	0,
#Partially deleted in new
chrX	54748898	54798240	chrX:54748898-54798240	3	-	54749894	54798210	789624	13	1208,378,114,36,93,2034,172,117,170,248,111,155,132,	0,2104,4752,5031,6118,8066,10857,25182,39581,41938,43027,48043,49210,
#Partially deleted in new
chrX	54787196	54788608	chrX:54787196-54788608	0	-	54787196	54787196	8553170	2	529,129,	0,1283,
#Deleted in new
chrX	54807598	54815694	chrX:54807598-54815694	1	+	54809331	54815682	789624	12	204,74,492,309,64,80,95,80,43,63,115,447,	0,1704,2123,3222,3651,3975,4558,5346,5519,5889,7062,7649,
#Deleted in new
chrX	54807598	54816007	chrX:54807598-54816007	3	+	54809331	54815682	789624	13	204,74,492,309,64,80,95,80,43,63,115,443,127,	0,1704,2123,3222,3651,3975,4558,5346,5519,5889,7062,7649,8282,
#Deleted in new
chrX	54807598	54815694	chrX:54807598-54815694	1	+	54809331	54815682	789624	14	204,74,87,291,84,84,64,80,95,80,43,63,115,447,	0,1704,2123,2324,3222,3447,3651,3975,4558,5346,5519,5889,7062,7649,
#Deleted in new
chrX	54807746	54816007	chrX:54807746-54816007	1	+	54809331	54815682	789624	13	56,74,96,342,309,64,80,95,80,43,63,115,760,	0,1556,1975,2125,3074,3503,3827,4410,5198,5371,5741,6914,7501,
#Deleted in new
chrX	54807754	54811644	chrX:54807754-54811644	0	+	54807754	54807754	8553170	6	48,74,96,309,64,71,	0,1548,2363,3066,3495,3819,
#Deleted in new
chrX	54808337	54815694	chrX:54808337-54815694	1	+	54809331	54815682	789624	12	96,74,492,309,64,80,95,80,43,63,115,447,	0,965,1384,2483,2912,3236,3819,4607,4780,5150,6323,6910,
#Deleted in new
chrX	54808370	54816007	chrX:54808370-54816007	1	+	54809331	54815682	789624	13	63,74,492,309,64,80,95,80,43,63,115,443,127,	0,932,1351,2450,2879,3203,3786,4574,4747,5117,6290,6877,7510,
#Deleted in new
chrX	54808370	54816012	chrX:54808370-54816012	1	+	54809331	54815682	789624	15	63,74,87,291,84,84,64,80,95,80,43,63,115,443,132,	0,932,1351,1552,2450,2675,2879,3203,3786,4574,4747,5117,6290,6877,7510,
#Deleted in new
chrX	54809059	54815694	chrX:54809059-54815694	1	+	54809331	54815682	789624	12	164,74,492,309,64,80,95,80,43,63,115,447,	0,243,662,1761,2190,2514,3097,3885,4058,4428,5601,6188,
#Deleted in new
chrX	54809096	54810132	chrX:54809096-54810132	0	+	54809096	54809096	8553170	2	280,411,	0,625,
#Deleted in new
chrX	54809109	54811130	chrX:54809109-54811130	0	+	54809109	54809109	8553170	4	114,74,492,310,	0,193,612,1711,
#Deleted in new
chrX	54811531	54813161	chrX:54811531-54813161	0	+	54811531	54811531	8553170	4	122,95,80,44,	0,625,1413,1586,
#Deleted in new
chrX	54812172	54813334	chrX:54812172-54813334	0	+	54812172	54812172	8553170	3	79,80,217,	0,772,945,
#Deleted in new
chrX	54814369	54814497	chrX:54814369-54814497	3	+	54814369	54814369	789624	1	128,	0,
#Deleted in new
chrX	54842013	54842134	chrX:54842013-54842134	7	+	54842013	54842013	16724991	1	121,	0,
#Partially deleted in new
chrX	54920461	54923356	chrX:54920461-54923356	0	+	54922664	54923356	789624	2	417,779,	0,2116,
#Partially deleted in new
chrX	54920562	54931429	chrX:54920562-54931429	1	+	54924990	54931020	789624	11	316,105,64,80,92,80,43,63,115,2429,226,	0,3888,4107,4426,5029,5847,6020,6480,7104,8040,10641,
#Partially deleted in new
chrX	54920562	54922877	chrX:54920562-54922877	0	+	54922664	54922877	789624	2	316,660,	0,1655,
#Partially deleted in new
chrX	54920795	54923240	chrX:54920795-54923240	0	+	54922664	54923240	789624	4	83,94,74,617,	0,170,1422,1828,
#Partially deleted in new
chrX	54920795	54923036	chrX:54920795-54923036	0	+	54922246	54923036	789624	3	93,74,459,	0,1422,1782,
#Partially deleted in new
chrX	54920810	54931431	chrX:54920810-54931431	3	+	54922246	54931020	789624	13	68,89,1191,105,64,80,92,80,43,63,115,2429,228,	0,1392,1767,3640,3859,4178,4781,5599,5772,6232,6856,7792,10393,
#Partially deleted in new
chrX	54920810	54931431	chrX:54920810-54931431	1	+	54922246	54931338	789624	13	68,89,1191,105,64,80,92,80,43,63,115,108,228,	0,1392,1767,3640,3859,4178,4781,5599,5772,6232,6856,7792,10393,
#Partially deleted in new
chrX	54920810	54922856	chrX:54920810-54922856	0	+	54922664	54922856	789624	2	68,654,	0,1392,
#Partially deleted in new
chrX	54920815	54931431	chrX:54920815-54931431	1	+	54922246	54931338	789624	13	63,74,1191,105,64,80,92,80,43,63,115,108,228,	0,1402,1762,3635,3854,4173,4776,5594,5767,6227,6851,7787,10388,
#Partially deleted in new
chrX	54920815	54931431	chrX:54920815-54931431	1	+	54922246	54931338	789624	12	63,74,105,64,80,92,80,43,63,115,108,228,	0,1402,3635,3854,4173,4776,5594,5767,6227,6851,7787,10388,
#Partially deleted in new
chrX	54920815	54931431	chrX:54920815-54931431	0	+	54922246	54930800	789624	14	63,74,1191,105,64,80,92,80,43,63,115,108,291,228,	0,1402,1762,3635,3854,4173,4776,5594,5767,6227,6851,7787,9925,10388,
#Partially deleted in new
chrX	54920815	54931429	chrX:54920815-54931429	1	+	54922246	54931020	789624	14	63,74,105,64,80,92,80,43,63,115,66,41,291,226,	0,1402,3635,3854,4173,4776,5594,5767,6227,6851,7787,7854,9925,10388,
#Partially deleted in new
chrX	54920823	54922674	chrX:54920823-54922674	0	+	54922664	54922674	8553170	2	142,457,	0,1394,
#Partially deleted in new
chrX	54920823	54925659	chrX:54920823-54925659	0	+	54920823	54920823	8553170	7	142,74,117,105,64,80,68,	0,1394,3006,3627,3846,4165,4768,
#Partially deleted in new
chrX	54920824	54925604	chrX:54920824-54925604	0	+	54922246	54925604	789624	6	54,89,105,64,80,13,	0,1378,3626,3845,4164,4767,
#Partially deleted in new
chrX	54920824	54922738	chrX:54920824-54922738	0	+	54920824	54920824	8553170	3	64,74,161,	0,1393,1753,
#Partially deleted in new
chrX	54920850	54931431	chrX:54920850-54931431	1	+	54922246	54931020	789624	12	115,74,105,64,80,92,80,43,63,115,2429,228,	0,1367,3600,3819,4138,4741,5559,5732,6192,6816,7752,10353,
#Partially deleted in new
chrX	54920850	54923060	chrX:54920850-54923060	0	+	54922246	54923060	789624	3	115,74,483,	0,1367,1727,
#Partially deleted in new
chrX	54921083	54923033	chrX:54921083-54923033	0	+	54922664	54923033	789624	3	94,74,410,	0,1134,1540,
#Partially deleted in new
chrX	54921387	54923038	chrX:54921387-54923038	0	+	54922246	54923038	789624	3	59,74,461,	0,830,1190,
#Partially deleted in new
chrX	54921976	54923028	chrX:54921976-54923028	0	+	54922664	54923028	789624	2	111,451,	0,601,
#Partially deleted in new
chrX	54924377	54926480	chrX:54924377-54926480	0	+	54924377	54924377	8553170	5	178,64,80,92,71,	0,292,611,1214,2032,
#Partially deleted in new
chrX	54924487	54931429	chrX:54924487-54931429	0	+	54924487	54924487	8553170	9	68,64,80,92,80,523,115,2429,226,	0,182,501,1104,1922,2095,3179,4115,6716,
#Partially deleted in new
chrX	54926821	54930865	chrX:54926821-54930865	0	+	54926821	54926821	8553170	4	284,115,108,125,	0,845,1781,3919,
#Partially deleted in new
chrX	54927284	54928947	chrX:54927284-54928947	0	+	54927284	54927284	8553170	2	497,345,	0,1318,
#Partially deleted in new
chrX	54927304	54927433	chrX:54927304-54927433	3	+	54927304	54927304	8553170	1	129,	0,
#Partially deleted in new
chrX	54932960	54994078	chrX:54932960-54994078	3	-	54933402	54994007	0	14	502,65,63,130,105,147,208,122,57,75,67,94,126,168,	0,860,1986,4634,12478,16114,18944,23192,25345,25890,26866,27863,30296,60950,
#Partially deleted in new
chrX	54933133	54994078	chrX:54933133-54994078	1	-	54933402	54994007	789624	10	329,65,63,130,105,75,67,28,126,168,	0,687,1813,4461,12305,25717,26693,27690,30123,60777,
#Partially deleted in new
chrX	54933133	54998534	chrX:54933133-54998534	1	-	54933402	54998433	0	13	329,65,63,130,105,147,208,122,57,75,67,94,129,	0,687,1813,4461,12305,15941,18771,23019,25172,25717,26693,27690,65272,
#Partially deleted in new
chrX	54933386	54994022	chrX:54933386-54994022	1	-	54933402	54952069	789624	13	76,65,63,130,105,147,208,122,57,75,67,126,112,	0,434,1560,4208,12052,15688,18518,22766,24919,25464,26440,29870,60524,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	55000356	55009057	chrX:55000356-55009057	3	+	55000422	55007435	789624	6	223,84,181,147,70,2540,	0,1189,1894,2605,3442,6161,
#Partially deleted in new
chrX	55000392	55006757	chrX:55000392-55006757	0	+	55000392	55000392	8553170	5	187,84,147,70,240,	0,1153,2569,3406,6125,
#Partially deleted in new
chrX	55009054	55031064	chrX:55009054-55031064	3	-	55009179	55026000	789624	11	289,163,269,165,180,185,223,111,123,196,123,	0,4431,5692,6523,8431,11265,11997,14702,15663,16765,21887,
#Partially deleted in new
chrX	55009054	55030977	chrX:55009054-55030977	1	-	55009179	55027807	789624	11	289,163,269,165,180,185,223,123,196,107,36,	0,4431,5692,6523,8431,11265,11997,15663,16765,18696,21887,
#Partially deleted in new
chrX	55009054	55030977	chrX:55009054-55030977	1	-	55009179	55026000	8553170	11	289,163,269,165,180,185,223,111,123,196,36,	0,4431,5692,6523,8431,11265,11997,14702,15663,16765,21887,
#Partially deleted in new
chrX	55009088	55030977	chrX:55009088-55030977	1	-	55009179	55026000	789624	10	255,163,269,165,180,185,223,123,196,36,	0,4397,5658,6489,8397,11231,11963,15629,16731,21853,
#Partially deleted in new
chrX	55009112	55020433	chrX:55009112-55020433	0	-	55009241	55020433	789624	5	231,269,165,180,114,	0,5634,6465,8373,11207,
#Partially deleted in new
chrX	55017559	55030977	chrX:55017559-55030977	0	-	55017559	55017559	8553170	5	106,185,123,196,36,	0,2760,7158,8260,13382,
#Partially deleted in new
chrX	55017614	55030976	chrX:55017614-55030976	0	-	55017614	55026000	789624	6	51,10,59,123,196,35,	0,2705,2831,7103,8205,13327,
#Partially deleted in new
chrX	55017649	55030977	chrX:55017649-55030977	0	-	55017649	55024805	789624	5	16,185,223,123,36,	0,2670,3402,7068,13292,
#Partially deleted in new
chrX	55020333	55030977	chrX:55020333-55030977	0	-	55020333	55024805	789624	5	171,223,111,123,36,	0,718,3423,4384,10608,
#Partially deleted in new
chrX	55021265	55030977	chrX:55021265-55030977	0	-	55021265	55027807	789624	6	9,111,123,196,107,36,	0,2491,3452,4554,6485,9676,
#Partially deleted in new
chrX	55044748	55045121	chrX:55044748-55045121	7	-	55044748	55044748	16724991	1	373,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	55054944	55055838	chrX:55054944-55055838	7	-	55054944	55054944	16724991	1	894,	0,
#Partially deleted in new
chrX	55075062	55078909	chrX:55075062-55078909	1	+	55076041	55078798	789624	5	52,92,58,126,128,	0,971,1506,2336,3719,
#Partially deleted in new
chrX	55075070	55078903	chrX:55075070-55078903	3	+	55076041	55078798	789624	5	44,92,109,126,122,	0,963,1498,2328,3711,
#Partially deleted in new
chrX	55089007	55092842	chrX:55089007-55092842	3	+	55090020	55092731	789624	5	96,92,109,126,128,	0,1005,1494,2324,3707,
#Partially deleted in new
chrX	55089051	55092842	chrX:55089051-55092842	1	+	55090020	55092731	789624	5	52,92,58,126,128,	0,961,1450,2280,3663,
#Partially deleted in new
chrX	55089135	55090610	chrX:55089135-55090610	0	+	55090020	55090610	789624	3	110,92,109,	0,877,1366,
#Partially deleted in new
chrX	55101636	55102026	chrX:55101636-55102026	7	-	55101636	55101636	16724991	1	390,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	55137929	55142433	chrX:55137929-55142433	7	+	55137929	55137929	16724991	3	620,193,130,	0,3599,4374,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	55143101	55161195	chrX:55143101-55161195	1	-	55143778	55161156	789624	4	774,131,103,59,	0,3079,16024,18035,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	55143101	55161310	chrX:55143101-55161310	1	-	55143778	55161156	789624	4	774,131,100,174,	0,3079,16027,18035,
#Partially deleted in new
chrX	55145244	55161195	chrX:55145244-55161195	3	-	55146083	55161156	789624	3	1067,103,59,	0,13881,15892,
#Partially deleted in new
chrX	55145355	55161182	chrX:55145355-55161182	1	-	55146297	55161156	789624	3	956,107,46,	0,13766,15781,
#Partially deleted in new
chrX	55145386	55161119	chrX:55145386-55161119	1	-	55146083	55160985	789624	3	925,100,145,	0,13742,15588,
#Partially deleted in new
chrX	55145937	55161102	chrX:55145937-55161102	1	-	55146083	55160881	789624	3	374,100,238,	0,13191,14927,
#Partially deleted in new
chrX	55146268	55160941	chrX:55146268-55160941	0	-	55146268	55146268	8553170	3	43,100,199,	0,12860,14474,
#Partially deleted in new
chrX	55172716	55176026	chrX:55172716-55176026	7	+	55172716	55172716	16724991	3	81,106,126,	0,547,3184,
#Partially deleted in new
chrX	55178206	55178737	chrX:55178206-55178737	7	-	55178206	55178206	16724991	1	531,	0,
#Partially deleted in new
chrX	55179193	55179999	chrX:55179193-55179999	7	-	55179193	55179193	16724991	1	806,	0,
#Partially deleted in new
chrX	55180376	55181277	chrX:55180376-55181277	7	-	55180376	55180376	16724991	1	901,	0,
#Partially deleted in new
chrX	55181390	55182920	chrX:55181390-55182920	3	-	55181919	55181994	789624	1	1530,	0,
#Partially deleted in new
chrX	55220354	55224106	chrX:55220354-55224106	3	+	55220599	55224003	789624	5	297,89,109,126,120,	0,1020,1412,2266,3632,
#Partially deleted in new
chrX	55220356	55224106	chrX:55220356-55224106	1	+	55221382	55224003	789624	5	96,89,109,126,120,	0,1018,1410,2264,3630,
#Partially deleted in new
chrX	55220419	55224108	chrX:55220419-55224108	1	+	55221382	55224003	789624	5	33,89,58,126,122,	0,955,1347,2201,3567,
#Partially deleted in new
chrX	55258411	55264846	chrX:55258411-55264846	3	-	55258505	55263903	789624	5	117,126,109,92,301,	0,2122,4839,5408,6134,
#Partially deleted in new
chrX	55258477	55264730	chrX:55258477-55264730	1	-	55258505	55263903	789624	5	51,126,109,106,185,	0,2056,4773,5342,6068,
#Partially deleted in new
chrX	55279838	55288685	chrX:55279838-55288685	7	+	55279838	55279838	16724991	5	52,92,109,126,19,	0,1535,2024,2881,8828,
#Partially deleted in new
chrX	55281370	55288785	chrX:55281370-55288785	5	+	55281370	55281370	16724991	4	95,109,126,117,	0,492,1349,7298,
#Deleted in new
chrX	55451494	55451582	chrX:55451494-55451582	3	+	55451494	55451494	5263520	1	88,	0,
#Deleted in new
chrX	55451494	55451582	chrX:55451494-55451582	3	-	55451494	55451494	5263520	1	88,	0,
#Deleted in new
chrX	55452104	55453566	chrX:55452104-55453566	3	+	55452374	55453034	789624	1	1462,	0,
#Deleted in new
chrX	55484615	55489202	chrX:55484615-55489202	3	-	55486803	55488939	789624	2	4373,34,	0,4553,
#Deleted in new
chrX	55486803	55488817	chrX:55486803-55488817	0	-	55486803	55488817	789624	2	1167,124,	0,1890,
#Deleted in new
chrX	55520381	55520714	chrX:55520381-55520714	7	-	55520381	55520381	16724991	1	333,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	55582732	55582834	chrX:55582732-55582834	3	+	55582732	55582732	8553170	1	102,	0,
#Partially deleted in new
chrX	55599662	55600106	chrX:55599662-55600106	7	-	55599662	55599662	16724991	1	444,	0,
#Partially deleted in new
chrX	55623399	55625325	chrX:55623399-55625325	3	+	55623711	55624647	789624	1	1926,	0,
#Partially deleted in new
chrX	55633030	55635656	chrX:55633030-55635656	7	-	55633030	55633030	16724991	3	126,100,81,	0,1656,2545,
#Partially deleted in new
chrX	55654708	55657014	chrX:55654708-55657014	7	-	55654708	55654708	16724991	3	126,86,81,	0,1647,2225,
#Partially deleted in new
chrX	55654720	55656965	chrX:55654720-55656965	4	-	55654720	55654720	16724991	3	114,64,32,	0,1657,2213,
#Partially deleted in new
chrX	55717738	55758774	chrX:55717738-55758774	1	+	55718327	55758343	789624	10	681,34,100,67,223,96,123,92,116,529,	0,1575,4447,11555,13625,33362,35653,38102,39477,40507,
#Partially deleted in new
chrX	55717748	55753475	chrX:55717748-55753475	0	+	55719335	55753475	789624	7	40,34,100,67,223,96,84,	0,1565,4437,11545,13615,33352,35643,
#Partially deleted in new
chrX	55717884	55758348	chrX:55717884-55758348	3	+	55718327	55758343	789624	11	535,34,100,84,67,223,96,123,92,116,103,	0,1429,4301,9422,11409,13479,33216,35507,37956,39331,40361,
#Partially deleted in new
chrX	55722190	55731708	chrX:55722190-55731708	0	+	55722190	55722190	8553170	3	95,67,345,	0,7103,9173,
#Partially deleted in new
chrX	55731400	55751623	chrX:55731400-55751623	0	+	55731400	55731400	8553170	2	186,523,	0,19700,
#Partially deleted in new
chrX	55755809	55758382	chrX:55755809-55758382	0	+	55755809	55755809	8553170	3	123,116,137,	0,1406,2436,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	55908122	56015173	chrX:55908122-56015173	3	+	55908122	55908122	8553170	2	678,329,	0,106722,
#Partially deleted in new
chrX	55961207	55962482	chrX:55961207-55962482	7	+	55961207	55961207	16724991	1	1275,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	56232420	56269208	chrX:56232420-56269208	0	+	56232420	56232420	8553170	2	921,4029,	0,32759,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	56232436	56287889	chrX:56232436-56287889	1	+	56233334	56284328	789624	6	309,184,74,565,112,3577,	0,721,17794,32743,36941,51876,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	56232473	56287884	chrX:56232473-56287884	0	+	56232473	56232473	789624	5	868,74,4310,140,3572,	0,17757,32706,37708,51839,
#Partially deleted in new
chrX	56233046	56284669	chrX:56233046-56284669	3	+	56233334	56284494	789624	6	295,74,565,112,140,357,	0,17184,32133,36331,37135,51266,
#Partially deleted in new
chrX	56233188	56285097	chrX:56233188-56285097	0	+	56233334	56268953	789624	7	153,74,565,79,112,140,785,	0,17042,31991,35724,36189,36993,51124,
#Partially deleted in new
chrX	56233211	56284655	chrX:56233211-56284655	1	+	56233275	56284328	789624	4	130,565,112,343,	0,31968,36166,51101,
#Deleted in new
chrX	56242936	56243409	chrX:56242936-56243409	7	-	56242936	56242936	16724991	1	473,	0,
#Deleted in new
chrX	56563638	56567868	chrX:56563638-56567868	3	+	56563873	56565748	0	1	4230,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	56618390	56624458	chrX:56618390-56624458	3	+	56618390	56618390	8553170	2	123,590,	0,5478,
#Partially deleted in new
chrX	56729258	56818380	chrX:56729258-56818380	3	+	56729353	56729560	789624	3	331,137,1061,	0,2804,88061,
#Partially deleted in new
chrX	56729353	56817626	chrX:56729353-56817626	1	+	56729353	56729560	789624	2	236,307,	0,87966,
#Partially deleted in new
chrX	56729372	56817376	chrX:56729372-56817376	0	+	56729372	56732073	789624	3	111,137,57,	0,2690,87947,
#Deleted in new
chrX	56737241	56737577	chrX:56737241-56737577	7	-	56737241	56737241	16724991	1	336,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	56818297	56995551	chrX:56818297-56995551	0	-	56984469	56994947	0	8	1916,51,124,122,81,213,227,336,	0,40408,43244,44124,160282,165968,176425,176918,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	56973195	56995530	chrX:56973195-56995530	0	-	56984469	56994947	0	7	1703,124,130,81,213,227,315,	0,3877,5096,5384,11070,21527,22020,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	56973434	56995542	chrX:56973434-56995542	0	-	56984469	56994947	0	6	1464,124,81,213,227,327,	0,3638,5145,10831,21288,21781,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	56973509	56974796	chrX:56973509-56974796	3	+	56973509	56973509	8553170	2	412,232,	0,1055,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	56974494	56995349	chrX:56974494-56995349	0	-	56984469	56994947	0	6	404,124,81,213,227,69,	0,2578,4085,9771,20228,20786,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	56975119	56995555	chrX:56975119-56995555	0	-	56984469	56994947	0	5	2077,81,213,227,340,	0,3460,9146,19603,20096,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	56975140	56995515	chrX:56975140-56995515	0	-	56984469	56994947	0	6	2056,130,75,213,227,300,	0,3151,3439,9125,19582,20075,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	56975141	56995553	chrX:56975141-56995553	0	-	56984469	56994947	0	6	2055,207,81,213,227,338,	0,3150,3438,9124,19581,20074,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	56975141	56995730	chrX:56975141-56995730	0	-	56984469	56994947	0	6	2055,130,81,213,227,515,	0,3150,3438,9124,19581,20074,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	56975141	56995516	chrX:56975141-56995516	0	-	56984469	56994947	0	6	2055,130,81,213,227,236,	0,3150,3438,9124,19581,20139,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	56975141	56995555	chrX:56975141-56995555	2	-	56984469	56994947	0	4	3519,213,227,340,	0,9124,19581,20074,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	56975141	56995555	chrX:56975141-56995555	0	-	56984469	56994947	0	4	3519,213,227,275,	0,9124,19581,20139,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	56975141	56995533	chrX:56975141-56995533	0	-	56984469	56994947	0	6	2055,130,81,213,227,292,	0,3150,3438,9124,19581,20100,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	56975141	56995555	chrX:56975141-56995555	0	-	56984469	56994947	0	6	2055,130,168,213,227,340,	0,3150,3438,9124,19581,20074,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	56975141	56995555	chrX:56975141-56995555	0	-	56984469	56994947	0	6	2055,168,125,213,227,314,	0,3438,4156,9124,19581,20100,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	56975401	56995494	chrX:56975401-56995494	0	-	56984469	56994947	0	7	1795,130,81,125,213,227,214,	0,2890,3178,3896,8864,19321,19879,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	56975401	56995507	chrX:56975401-56995507	0	-	56984469	56994947	0	5	1795,81,213,227,227,	0,3178,8864,19321,19879,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	56975670	56995530	chrX:56975670-56995530	0	-	56984469	56994947	0	4	2990,213,227,289,	0,8595,19052,19571,
#Partially deleted in new
chrX	56976381	56995525	chrX:56976381-56995525	0	-	56984469	56994947	0	5	815,81,213,227,284,	0,2198,7884,18341,18860,
#Partially deleted in new
chrX	56976421	56995555	chrX:56976421-56995555	0	-	56984469	56994947	0	6	775,207,81,213,227,275,	0,1870,2158,7844,18301,18859,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	56976421	56995535	chrX:56976421-56995535	0	-	56984469	56994947	0	5	2000,81,213,227,255,	0,2158,7844,18301,18859,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	56976422	56995555	chrX:56976422-56995555	0	-	56984469	56994947	0	5	1999,81,213,227,340,	0,2157,7843,18300,18793,
#Partially deleted in new
chrX	56976430	56995545	chrX:56976430-56995545	0	-	56984469	56994947	0	7	766,130,81,125,213,227,330,	0,1861,2149,2867,7835,18292,18785,
#Partially deleted in new
chrX	56976438	56995527	chrX:56976438-56995527	0	-	56984469	56994947	0	6	758,126,81,213,227,312,	0,1853,2141,7827,18284,18777,
#Partially deleted in new
chrX	56976769	56995533	chrX:56976769-56995533	0	-	56984469	56994947	0	7	427,130,185,181,213,227,318,	0,1522,1810,5986,7496,17953,18446,
#Partially deleted in new
chrX	56976849	56995517	chrX:56976849-56995517	0	-	56984469	56994947	0	4	347,81,213,795,	0,1730,7416,17873,
#Partially deleted in new
chrX	56977023	56995493	chrX:56977023-56995493	0	-	56984469	56994947	0	5	173,183,213,227,213,	0,1556,7242,17699,18257,
#Partially deleted in new
chrX	56977063	56984466	chrX:56977063-56984466	0	-	56977063	56977063	8553170	3	133,369,201,	0,1228,7202,
#Partially deleted in new
chrX	56977063	56995541	chrX:56977063-56995541	0	-	56984469	56994947	0	5	133,168,213,227,326,	0,1516,7202,17659,18152,
#Partially deleted in new
chrX	56977088	56995381	chrX:56977088-56995381	0	-	56984469	56994947	0	6	108,126,81,213,227,101,	0,1203,1491,7177,17634,18192,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	56977314	56995555	chrX:56977314-56995555	0	-	56984469	56994947	0	5	1103,172,213,227,340,	0,1265,6951,17408,17901,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	56977478	56980463	chrX:56977478-56980463	0	-	56977478	56977478	8553170	2	943,1884,	0,1101,
#Partially deleted in new
chrX	56981513	56995539	chrX:56981513-56995539	0	-	56984469	56994947	0	4	1190,213,227,324,	0,2752,13209,13702,
#Partially deleted in new
chrX	56990830	56995738	chrX:56990830-56995738	1	-	56994170	56994947	0	2	4119,523,	0,4385,
#Partially deleted in new
chrX	56990862	56995806	chrX:56990862-56995806	1	-	56994170	56994947	0	2	4087,748,	0,4196,
#Partially deleted in new
chrX	56990863	56995827	chrX:56990863-56995827	1	-	56994170	56994947	0	2	4086,200,	0,4764,
#Partially deleted in new
chrX	56990894	56995647	chrX:56990894-56995647	1	-	56994170	56994947	0	2	4055,406,	0,4347,
#Partially deleted in new
chrX	56990905	56995555	chrX:56990905-56995555	1	-	56992442	56994947	789624	3	1678,227,340,	0,3817,4310,
#Partially deleted in new
chrX	56990941	56995555	chrX:56990941-56995555	1	-	56994170	56994947	0	1	4614,	0,
#Partially deleted in new
chrX	56990945	56995553	chrX:56990945-56995553	1	-	56994170	56994947	0	2	4004,273,	0,4335,
#Partially deleted in new
chrX	56990953	56995426	chrX:56990953-56995426	1	-	56992069	56994947	789624	3	1284,227,211,	0,3769,4262,
#Partially deleted in new
chrX	56990955	56995268	chrX:56990955-56995268	0	-	56993873	56994947	789624	4	1628,102,227,53,	0,2831,3767,4260,
#Partially deleted in new
chrX	56991002	56995555	chrX:56991002-56995555	1	-	56994170	56994947	789624	3	3417,227,314,	0,3720,4239,
#Partially deleted in new
chrX	56991117	56995496	chrX:56991117-56995496	0	-	56993873	56994947	789624	4	1466,102,227,255,	0,2669,3605,4124,
#Partially deleted in new
chrX	56991564	56995364	chrX:56991564-56995364	0	-	56994170	56994947	0	3	1019,1163,149,	0,2222,3651,
#Partially deleted in new
chrX	56994361	56995495	chrX:56994361-56995495	0	-	56994361	56994947	789624	3	58,227,280,	0,361,854,
#Partially deleted in new
chrX	57068913	57069685	chrX:57068913-57069685	7	-	57068913	57068913	16724991	1	772,	0,
#Deleted in new
chrX	57118550	57120590	chrX:57118550-57120590	0	-	57118732	57120590	789624	2	215,186,	0,1854,
#Deleted in new
chrX	57119681	57121491	chrX:57119681-57121491	1	-	57119852	57120629	0	2	953,199,	0,1611,
#Deleted in new
chrX	57119681	57121315	chrX:57119681-57121315	1	-	57119852	57120629	789624	3	420,227,78,	0,723,1556,
#Deleted in new
chrX	57119682	57121546	chrX:57119682-57121546	3	-	57119852	57120629	0	2	949,309,	0,1555,
#Deleted in new
chrX	57119887	57121543	chrX:57119887-57121543	0	-	57119887	57120629	789624	2	744,306,	0,1350,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	57121661	57127243	chrX:57121661-57127243	3	+	57121661	57121661	8553170	2	306,359,	0,5223,
#Deleted in new
chrX	57134529	57136997	chrX:57134529-57136997	3	-	57135820	57136597	789624	1	2468,	0,
#Deleted in new
chrX	57135649	57137625	chrX:57135649-57137625	1	-	57135820	57136597	789624	2	953,366,	0,1610,
#Deleted in new
chrX	57135649	57137523	chrX:57135649-57137523	1	-	57135820	57136597	789624	3	420,227,319,	0,723,1555,
#Deleted in new
chrX	57229033	57229415	chrX:57229033-57229415	7	+	57229033	57229033	16724991	1	382,	0,
#Partially deleted in new
chrX	57286705	57489196	chrX:57286705-57489196	3	+	57286825	57488932	789624	11	312,83,137,210,120,136,118,120,112,195,440,	0,5792,23887,44892,54565,91945,94206,145212,160222,161818,202051,
#Partially deleted in new
chrX	57392645	57395409	chrX:57392645-57395409	7	-	57392645	57392645	16724991	1	2764,	0,
#Partially deleted in new
chrX	57431962	57489193	chrX:57431962-57489193	0	+	57431962	57431962	8553170	3	50,37,437,	0,16719,56794,
#Partially deleted in new
chrX	57431997	57452166	chrX:57431997-57452166	0	+	57431997	57431997	8553170	4	40,112,195,36,	0,14930,16526,20133,
#Deleted in new
chrX	57591651	57597545	chrX:57591651-57597545	3	+	57592048	57594460	789624	1	5894,	0,
#Deleted in new
chrX	57677066	57680260	chrX:57677066-57680260	3	-	57680122	57680260	789624	1	3194,	0,
#Deleted in new
chrX	57766319	57767292	chrX:57766319-57767292	7	+	57766319	57766319	16724991	1	973,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	57906707	57910820	chrX:57906707-57910820	3	-	57908020	57910420	789624	1	4113,	0,
#Partially deleted in new
chrX	57933836	57934803	chrX:57933836-57934803	7	-	57933836	57933836	16724991	1	967,	0,
#Partially deleted in new
chrX	57984685	57986133	chrX:57984685-57986133	7	+	57984685	57984685	16724991	1	1448,	0,
#Partially deleted in new
chrX	62779249	62780326	chrX:62779249-62780326	7	+	62779249	62779249	16724991	1	1077,	0,
#Partially deleted in new
chrX	62842541	62843502	chrX:62842541-62843502	7	+	62842541	62842541	16724991	1	961,	0,
#Partially deleted in new
chrX	62843696	62844306	chrX:62843696-62844306	7	+	62843696	62843696	16724991	1	610,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	62878810	62884842	chrX:62878810-62884842	7	-	62878810	62878810	16724991	2	739,2231,	0,3801,
#Deleted in new
chrX	63087070	63088664	chrX:63087070-63088664	7	+	63087070	63087070	16724991	1	1594,	0,
#Deleted in new
chrX	63299246	63299673	chrX:63299246-63299673	7	-	63299246	63299246	16724991	1	427,	0,
#Deleted in new
chrX	63347227	63351344	chrX:63347227-63351344	3	-	63350069	63350819	0	1	4117,	0,
#Partially deleted in new
chrX	63349645	63352178	chrX:63349645-63352178	3	+	63349645	63349645	8553170	2	89,337,	0,2196,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	63426558	63560993	chrX:63426558-63560993	1	-	63426558	63426558	789624	4	2423,128,173,162,	0,5805,90351,134273,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	63426559	63431612	chrX:63426559-63431612	0	-	63426559	63426559	8553170	1	5053,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	63426559	63561049	chrX:63426559-63561049	1	-	63426559	63426559	789624	3	2422,128,218,	0,5804,134272,
#Partially deleted in new
chrX	63509941	63561049	chrX:63509941-63561049	1	-	63509941	63509941	8553170	3	138,173,218,	0,6968,50890,
#Partially deleted in new
chrX	63634966	63755113	chrX:63634966-63755113	1	-	63638027	63754312	0	10	3243,69,244,132,130,233,180,192,180,810,	0,9013,20527,30919,39071,43373,62158,71291,89565,119337,
#Partially deleted in new
chrX	63634966	63785546	chrX:63634966-63785546	1	-	63635318	63785145	789624	10	442,53,244,132,130,233,180,192,180,431,	0,9029,20527,30919,39071,43373,62158,71291,89565,150149,
#Partially deleted in new
chrX	63634970	63755089	chrX:63634970-63755089	1	-	63637142	63754312	789624	11	2338,160,69,244,132,130,233,180,192,180,786,	0,3079,9009,20523,30915,39067,43369,62154,71287,89561,119333,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	63635002	63754747	chrX:63635002-63754747	1	-	63638027	63724657	789624	11	3207,69,244,132,130,233,180,192,180,48,444,	0,8977,20491,30883,39035,43337,62122,71255,89529,91643,119301,
#Partially deleted in new
chrX	63635002	63754711	chrX:63635002-63754711	1	-	63638027	63712909	789624	10	3207,69,244,132,130,233,180,192,206,408,	0,8977,20491,30883,39035,43337,62122,71255,77904,119301,
#Partially deleted in new
chrX	63635002	63754755	chrX:63635002-63754755	1	-	63636862	63724657	789624	11	1915,160,69,244,132,130,233,180,192,180,441,	0,3047,8977,20491,30883,39035,43337,62122,71255,89529,119312,
#Partially deleted in new
chrX	63635014	63755124	chrX:63635014-63755124	1	-	63638027	63724657	789624	12	3195,69,244,132,130,233,180,192,180,229,88,810,	0,8965,20479,30871,39023,43325,62110,71243,89517,92176,92506,119300,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	63635070	63754340	chrX:63635070-63754340	0	-	63716074	63724657	789624	11	3139,69,244,132,130,233,180,192,132,180,26,	0,8909,20423,30815,38967,43269,62054,71187,80917,89461,119244,
#Partially deleted in new
chrX	63635160	63755123	chrX:63635160-63755123	1	-	63638027	63724657	789624	12	3049,69,244,132,130,233,180,192,180,129,373,203,	0,8819,20333,30725,38877,43179,61964,71097,89371,101829,119143,119760,
#Partially deleted in new
chrX	63635298	63754740	chrX:63635298-63754740	1	-	63638027	63724657	789624	11	2911,69,244,132,130,233,180,192,180,78,426,	0,8681,20195,30587,38739,43041,61826,70959,89233,108070,119016,
#Partially deleted in new
chrX	63636330	63785524	chrX:63636330-63785524	3	-	63638600	63785145	789624	11	1879,110,69,244,132,130,233,180,192,180,409,	0,2222,7649,19163,29555,37707,42009,60794,69927,88201,148785,
#Partially deleted in new
chrX	63637689	63785558	chrX:63637689-63785558	1	-	63638027	63785145	0	9	520,69,244,132,130,233,180,192,443,	0,6290,17804,28196,36348,40650,59435,68568,147426,
#Partially deleted in new
chrX	63637745	63755143	chrX:63637745-63755143	0	-	63703254	63754312	789624	12	464,69,244,130,233,180,153,115,192,180,373,223,	0,6234,17748,36292,40594,59379,63744,65424,68512,86786,116558,117175,
#Partially deleted in new
chrX	63637839	63755078	chrX:63637839-63755078	1	-	63638027	63724657	789624	10	370,69,244,132,130,233,180,192,180,158,	0,6140,17654,28046,36198,40500,59285,68418,86692,117081,
#Partially deleted in new
chrX	63637867	63755216	chrX:63637867-63755216	1	-	63638027	63755205	789624	10	342,69,244,132,130,233,180,192,180,59,	0,6112,17626,28018,36170,40472,59257,68390,86664,117290,
#Partially deleted in new
chrX	63637905	63754731	chrX:63637905-63754731	1	-	63638027	63724657	789624	11	304,69,244,132,130,233,180,192,180,53,428,	0,6074,17588,27980,36132,40434,59219,68352,86626,87777,116398,
#Partially deleted in new
chrX	63637981	63755127	chrX:63637981-63755127	1	-	63638027	63724657	789624	12	228,69,244,132,130,233,180,192,180,305,362,109,	0,5998,17512,27904,36056,40358,59143,68276,86550,94024,116333,117037,
#Partially deleted in new
chrX	63637981	63674138	chrX:63637981-63674138	0	-	63644006	63674138	789624	4	228,69,132,101,	0,5998,27904,36056,
#Partially deleted in new
chrX	63637981	63644266	chrX:63637981-63644266	0	-	63637981	63637981	8553170	2	228,287,	0,5998,
#Partially deleted in new
chrX	63637981	63657990	chrX:63637981-63657990	0	-	63637981	63637981	8553170	4	228,69,244,86,	0,5998,17512,19923,
#Partially deleted in new
chrX	63637981	63755098	chrX:63637981-63755098	1	-	63638027	63724657	789624	12	228,69,244,132,130,233,180,192,180,51,362,178,	0,5998,17512,27904,36056,40358,59143,68276,86550,86814,116333,116939,
#Partially deleted in new
chrX	63637981	63755113	chrX:63637981-63755113	1	-	63638027	63719781	789624	11	228,69,244,132,130,233,180,192,183,362,193,	0,5998,17512,27904,36056,40358,59143,68276,81692,116333,116939,
#Partially deleted in new
chrX	63637984	63755063	chrX:63637984-63755063	1	-	63638027	63706332	0	9	225,69,244,132,130,233,180,192,749,	0,5995,17509,27901,36053,40355,59140,68273,116330,
#Partially deleted in new
chrX	63638026	63754740	chrX:63638026-63754740	0	-	63722828	63724657	789624	11	183,69,244,132,130,233,180,192,136,180,433,	0,5953,17467,27859,36011,40313,59098,68231,84735,86505,116281,
#Partially deleted in new
chrX	63638026	63754684	chrX:63638026-63754684	1	-	63638027	63724657	789624	10	183,69,244,132,130,233,180,192,180,377,	0,5953,17467,27859,36011,40313,59098,68231,86505,116281,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	63639414	63755127	chrX:63639414-63755127	1	-	63642902	63754312	789624	11	3496,69,244,132,130,233,180,192,180,373,207,	0,4565,16079,26471,34623,38925,57710,66843,85117,114889,115506,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	63639445	63755056	chrX:63639445-63755056	1	-	63641984	63724657	789624	10	2601,69,244,132,130,233,180,192,180,136,	0,4534,16048,26440,34592,38894,57679,66812,85086,115475,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	63639555	63644048	chrX:63639555-63644048	0	-	63639581	63644048	789624	2	64,69,	0,4424,
#Partially deleted in new
chrX	63655615	63706360	chrX:63655615-63706360	0	-	63658052	63706360	789624	7	122,1555,132,130,233,180,103,	0,894,10270,18422,22724,41509,50642,
#Deleted in new
chrX	63670195	63671502	chrX:63670195-63671502	3	-	63670195	63670195	789624	2	146,248,	0,1059,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	63678495	63809274	chrX:63678495-63809274	0	-	63678495	63706332	789624	5	77,180,192,61,72,	0,18629,27762,117020,130707,
#Partially deleted in new
chrX	63678503	63785215	chrX:63678503-63785215	0	-	63678503	63706332	789624	5	69,180,192,77,100,	0,18621,27754,77330,106612,
#Partially deleted in new
chrX	63697220	63755335	chrX:63697220-63755335	0	-	63697220	63724657	789624	4	84,192,180,128,	0,9037,27311,57987,
#Partially deleted in new
chrX	63697275	63785215	chrX:63697275-63785215	0	-	63697275	63724657	789624	5	29,192,180,77,100,	0,8982,27256,58558,87840,
#Partially deleted in new
chrX	63706262	63724975	chrX:63706262-63724975	0	-	63706262	63706262	8553170	3	187,180,180,	0,18269,18533,
#Partially deleted in new
chrX	63707410	63724607	chrX:63707410-63724607	0	-	63707410	63707410	8553170	2	24,76,	0,17121,
#Partially deleted in new
chrX	63709135	63724592	chrX:63709135-63724592	0	-	63709135	63709135	8553170	2	39,61,	0,15396,
#Partially deleted in new
chrX	63724531	63755032	chrX:63724531-63755032	0	-	63724531	63724657	789624	2	180,718,	0,29783,
#Deleted in new
chrX	63754283	63755070	chrX:63754283-63755070	0	-	63754283	63754283	8553170	1	787,	0,
#Deleted in new
chrX	63766874	63767400	chrX:63766874-63767400	7	+	63766874	63766874	16724991	1	526,	0,
#Deleted in new
chrX	63786001	63786087	chrX:63786001-63786087	3	-	63786001	63786001	5263520	1	86,	0,
#Partially deleted in new
chrX	64044304	64045058	chrX:64044304-64045058	7	+	64044304	64044304	16724991	1	754,	0,
#Partially deleted in new
chrX	64144871	64147052	chrX:64144871-64147052	7	-	64144871	64144871	16724991	2	1578,193,	0,1988,
#Partially deleted in new
chrX	64185116	64205744	chrX:64185116-64205744	3	-	64189878	64193286	0	2	8268,175,	0,20453,
#Partially deleted in new
chrX	64185116	64205708	chrX:64185116-64205708	1	-	64189878	64193286	0	2	8268,139,	0,20453,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	64210690	64210988	chrX:64210690-64210988	3	+	64210690	64210690	8553170	1	298,	0,
#Partially deleted in new
chrX	64224195	64230631	chrX:64224195-64230631	3	-	64224334	64225650	789624	3	273,847,169,	0,632,6267,
#Partially deleted in new
chrX	64268080	64395431	chrX:64268080-64395431	3	-	64268536	64395363	0	14	963,127,129,201,50,126,110,133,135,129,158,163,123,92,	0,2866,60691,63476,67998,69187,75530,76964,80579,81861,86696,88095,91324,127259,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	64305046	64306733	chrX:64305046-64306733	7	-	64305046	64305046	16724991	2	826,610,	0,1077,
#Partially deleted in new
chrX	64331413	64345158	chrX:64331413-64345158	0	-	64331413	64331413	8553170	4	344,126,110,114,	0,5854,12197,13631,
#Partially deleted in new
chrX	64331421	64348794	chrX:64331421-64348794	0	-	64331421	64331421	8553170	4	336,50,126,135,	0,4657,5846,17238,
#Partially deleted in new
chrX	64336080	64350040	chrX:64336080-64350040	0	-	64336080	64336080	8553170	5	48,126,133,135,99,	0,1187,8964,12579,13861,
#Deleted in new
chrX	64405472	64406136	chrX:64405472-64406136	7	+	64405472	64405472	16724991	1	664,	0,
#Deleted in new
chrX	64405641	64406103	chrX:64405641-64406103	5	+	64405641	64405641	16724991	1	462,	0,
#Partially deleted in new
chrX	64432400	64434145	chrX:64432400-64434145	7	+	64432400	64432400	16724991	1	1745,	0,
#Partially deleted in new
chrX	64612631	64613262	chrX:64612631-64613262	7	-	64612631	64612631	16724991	1	631,	0,
#Partially deleted in new
chrX	64623116	64624573	chrX:64623116-64624573	7	+	64623116	64623116	16724991	1	1457,	0,
#Partially deleted in new
chrX	64697877	64698547	chrX:64697877-64698547	7	-	64697877	64697877	16724991	1	670,	0,
#Partially deleted in new
chrX	64726747	64727048	chrX:64726747-64727048	7	-	64726747	64726747	16724991	1	301,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	64915801	64976533	chrX:64915801-64976533	1	-	64917763	64976377	789624	4	2095,173,172,209,	0,4279,6015,60523,
#Partially deleted in new
chrX	64916380	64976484	chrX:64916380-64976484	3	-	64917782	64976377	789624	5	1516,163,173,172,160,	0,2661,3700,5436,59944,
#Partially deleted in new
chrX	64916381	65034713	chrX:64916381-65034713	1	-	64917782	64921972	789624	5	1515,163,173,427,85,	0,2660,3699,5435,118247,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	64916487	64976533	chrX:64916487-64976533	0	-	64916487	64916487	8553170	3	3766,172,209,	0,5329,59837,
#Partially deleted in new
chrX	64917399	64920127	chrX:64917399-64920127	0	-	64917399	64917399	8553170	4	497,22,12,47,	0,1642,1793,2681,
#Partially deleted in new
chrX	64917779	64976473	chrX:64917779-64976473	0	-	64917779	64917779	8553170	5	117,195,173,172,149,	0,1262,2301,4037,58545,
#Partially deleted in new
chrX	64917839	65034669	chrX:64917839-65034669	0	-	64917839	64917839	8553170	5	57,163,173,172,41,	0,1202,2241,3977,116789,
#Partially deleted in new
chrX	64917857	64976363	chrX:64917857-64976363	0	-	64917857	64917857	8553170	5	39,163,173,427,39,	0,1184,2223,3959,58467,
#Partially deleted in new
chrX	65185017	65187265	chrX:65185017-65187265	7	-	65185017	65185017	16724991	3	1189,37,136,	0,1491,2112,
#Partially deleted in new
chrX	65270912	65273019	chrX:65270912-65273019	7	+	65270912	65270912	16724991	3	529,253,766,	0,762,1341,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	65327987	65331233	chrX:65327987-65331233	7	-	65327987	65327987	16724991	2	534,427,	0,2819,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	65356889	65357547	chrX:65356889-65357547	7	-	65356889	65356889	16724991	1	658,	0,
#Partially deleted in new
chrX	65366637	65499310	chrX:65366637-65499310	0	+	65366637	65366637	8553170	6	125,170,112,764,140,312,	0,2191,31955,122008,130494,132361,
#Partially deleted in new
chrX	65408083	65408672	chrX:65408083-65408672	7	+	65408083	65408083	16724991	1	589,	0,
#Partially deleted in new
chrX	65469086	65470380	chrX:65469086-65470380	7	+	65469086	65469086	16724991	2	589,379,	0,915,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	65488734	65507887	chrX:65488734-65507887	3	+	65488801	65503209	789624	5	675,140,235,107,6099,	0,8397,10264,11148,13054,
#Partially deleted in new
chrX	65512581	65534754	chrX:65512581-65534754	1	-	65512774	65534715	789624	13	320,151,479,148,207,86,110,47,285,82,70,126,275,	0,2241,5405,10978,11474,12383,15678,16630,17012,18775,19979,21028,21898,
#Partially deleted in new
chrX	65512581	65534756	chrX:65512581-65534756	3	-	65512774	65534715	789624	14	320,151,479,148,207,51,86,110,47,285,82,70,126,277,	0,2241,5405,10978,11474,11982,12383,15678,16630,17012,18775,19979,21028,21898,
#Partially deleted in new
chrX	65512582	65534756	chrX:65512582-65534756	1	-	65512774	65534715	789624	12	319,151,479,148,207,86,110,47,285,82,70,277,	0,2240,5404,10977,11473,12382,15677,16629,17011,18774,19978,21897,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrX	65512582	65534775	chrX:65512582-65534775	0	-	65525020	65534715	789624	13	319,151,479,3006,207,51,86,47,285,82,70,126,296,	0,2240,5404,8119,11473,11981,12382,16629,17011,18774,19978,21027,21897,
#Partially deleted in new
chrX	65520428	65523617	chrX:65520428-65523617	0	-	65520654	65523617	789624	2	389,58,	0,3131,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	65550897	65552421	chrX:65550897-65552421	7	-	65550897	65550897	16724991	1	1524,	0,
#Partially deleted in new
chrX	65588376	65729589	chrX:65588376-65729589	2	+	65716838	65729589	789624	4	236,84,96,152,	0,128441,139437,141061,
#Deleted in new
chrX	65588380	65589769	chrX:65588380-65589769	0	+	65588380	65588380	8553170	3	232,183,124,	0,505,1265,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	65588380	65625865	chrX:65588380-65625865	0	+	65588380	65588380	8553170	4	232,183,124,1222,	0,505,1265,36263,
#Partially deleted in new
chrX	65588397	65600750	chrX:65588397-65600750	0	+	65588397	65588397	8553170	3	215,183,89,	0,488,12264,
#Partially deleted in new
chrX	65588403	65593425	chrX:65588403-65593425	0	+	65588403	65588403	8553170	2	209,173,	0,4849,
#Partially deleted in new
chrX	65667669	65741931	chrX:65667669-65741931	1	+	65667841	65739893	0	13	184,84,96,275,84,147,97,164,131,161,93,225,2203,	0,49148,60144,61768,63437,64168,65514,67597,69125,69508,70855,71300,72059,
#Partially deleted in new
chrX	65772740	65773632	chrX:65772740-65773632	7	-	65772740	65772740	16724991	1	892,	0,
#Deleted in new
chrX	65786762	65787169	chrX:65786762-65787169	7	+	65786762	65786762	16724991	1	407,	0,
#Partially deleted in new
chrX	65794344	65795835	chrX:65794344-65795835	7	+	65794344	65794344	16724991	2	918,242,	0,1249,
#Deleted in new
chrX	65821254	65822249	chrX:65821254-65822249	7	-	65821254	65821254	16724991	1	995,	0,
#Deleted in new
chrX	65956288	65957196	chrX:65956288-65957196	7	-	65956288	65956288	16724991	1	908,	0,
#Deleted in new
chrX	65999750	66001071	chrX:65999750-66001071	3	+	65999750	65999750	8553170	2	207,650,	0,671,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	66015460	66020422	chrX:66015460-66020422	0	+	66015460	66015460	8553170	2	91,1599,	0,3363,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	66015460	66020422	chrX:66015460-66020422	3	+	66015460	66015460	8553170	3	91,125,1599,	0,1604,3363,
#Deleted in new
chrX	66018869	66018979	chrX:66018869-66018979	3	+	66018869	66018869	5263520	1	110,	0,
#Partially deleted in new
chrX	66021737	66040107	chrX:66021737-66040107	3	-	66022262	66039998	0	8	763,22,105,78,63,282,357,164,	0,1103,3287,5711,6312,10730,11736,18206,
#Partially deleted in new
chrX	66021737	66033664	chrX:66021737-66033664	0	-	66022084	66033664	789624	7	429,22,105,78,63,282,191,	0,1103,3287,5711,6312,10730,11736,
#Partially deleted in new
chrX	66021739	66040125	chrX:66021739-66040125	1	-	66022836	66039998	0	7	1123,105,78,63,282,357,182,	0,3285,5709,6310,10728,11734,18204,
#Partially deleted in new
chrX	66021768	66040060	chrX:66021768-66040060	1	-	66022262	66039998	0	7	732,22,105,78,63,357,117,	0,1072,3256,5680,6281,11705,18175,
#Deleted in new
chrX	66055586	66056587	chrX:66055586-66056587	7	-	66055586	66055586	16724991	1	1001,	0,
#Deleted in new
chrX	66074834	66076347	chrX:66074834-66076347	7	-	66074834	66074834	16724991	1	1513,	0,
#Partially deleted in new
chrX	66162548	66268867	chrX:66162548-66268867	1	+	66162727	66266672	789624	21	328,180,245,213,183,255,169,137,132,212,151,213,214,140,132,107,226,140,163,45,2428,	0,8009,9806,11040,25810,27135,29581,30953,32549,35134,36329,37991,40815,44646,45566,92486,93556,96291,97551,101095,103891,
#Partially deleted in new
chrX	66164266	66267386	chrX:66164266-66267386	1	+	66188534	66266672	789624	20	204,245,213,183,255,169,137,132,212,151,213,214,140,132,107,226,140,163,45,947,	0,8088,9322,24092,25417,27863,29235,30831,33416,34611,36273,39097,42928,43848,90768,91838,94573,95833,99377,102173,
#Partially deleted in new
chrX	66164269	66173800	chrX:66164269-66173800	0	+	66170570	66173800	789624	4	201,180,245,212,	0,6288,8085,9319,
#Partially deleted in new
chrX	66164297	66172428	chrX:66164297-66172428	0	+	66170561	66171142	789624	4	173,180,142,74,	0,6260,6829,8057,
#Partially deleted in new
chrX	66164358	66267383	chrX:66164358-66267383	3	+	66170561	66266672	789624	21	112,180,245,213,183,255,169,137,132,212,151,213,214,140,132,107,226,140,163,45,941,	0,6199,7996,9230,24000,25325,27771,29143,30739,33324,34519,36181,39005,42836,43756,90676,91746,94481,95741,99285,102084,
#Partially deleted in new
chrX	66164364	66267346	chrX:66164364-66267346	1	+	66170561	66266672	789624	18	106,180,245,213,183,255,169,137,132,214,140,132,107,226,140,163,45,907,	0,6193,7990,9224,23994,25319,27765,29137,30733,38999,42830,43750,90670,91740,94475,95735,99279,102075,
#Partially deleted in new
chrX	66169906	66267385	chrX:66169906-66267385	1	+	66170570	66266672	789624	20	831,245,213,183,255,169,137,132,212,151,213,214,140,132,107,226,140,163,45,946,	0,2448,3682,18452,19777,22223,23595,25191,27776,28971,30633,33457,37288,38208,85128,86198,88933,90193,93737,96533,
#Partially deleted in new
chrX	66170545	66208246	chrX:66170545-66208246	0	+	66170570	66208246	789624	14	192,245,213,183,255,169,137,132,83,151,213,214,140,132,	0,1809,3043,17813,19138,21584,22956,24552,27266,28332,29994,32818,36649,37569,
#Partially deleted in new
chrX	66200451	66208261	chrX:66200451-66208261	0	+	66200451	66200451	8553170	4	301,214,140,147,	0,2912,6743,7663,
#Partially deleted in new
chrX	66360765	66361776	chrX:66360765-66361776	7	-	66360765	66360765	16724991	1	1011,	0,
#Partially deleted in new
chrX	66437344	66440668	chrX:66437344-66440668	7	+	66437344	66437344	16724991	3	922,132,134,	0,1598,3190,
#Partially deleted in new
chrX	66497747	66499424	chrX:66497747-66499424	7	+	66497747	66497747	16724991	1	1677,	0,
#Partially deleted in new
chrX	66595636	66639041	chrX:66595636-66639041	1	-	66599483	66616020	789624	7	2457,387,165,86,179,97,47,	0,3837,6996,8784,9411,20297,43358,
#Partially deleted in new
chrX	66595641	66616030	chrX:66595641-66616030	1	-	66599483	66616020	789624	7	2452,393,57,165,86,179,97,	0,3832,4397,6991,8779,9406,20292,
#Partially deleted in new
chrX	66595641	66639298	chrX:66595641-66639298	3	-	66599483	66616020	789624	7	2452,387,165,86,179,97,98,	0,3832,6991,8779,9406,20292,43559,
#Partially deleted in new
chrX	66599483	66616020	chrX:66599483-66616020	1	-	66599483	66616020	789624	6	383,57,165,86,179,87,	0,555,3149,4937,5564,16450,
#Partially deleted in new
chrX	66676257	66676364	chrX:66676257-66676364	3	-	66676257	66676257	8553170	1	107,	0,
#Partially deleted in new
chrX	67373572	67375520	chrX:67373572-67375520	7	+	67373572	67373572	16724991	1	1948,	0,
#Partially deleted in new
chrX	67533162	67533987	chrX:67533162-67533987	7	+	67533162	67533162	16724991	1	825,	0,
#Partially deleted in new
chrX	67544031	67730618	chrX:67544031-67730618	1	+	67545146	67723717	789624	5	2731,152,117,288,6933,	0,99224,141978,167370,179654,
#Partially deleted in new
chrX	67544031	67730618	chrX:67544031-67730618	1	+	67545716	67723841	789624	9	2731,152,117,288,145,131,21,158,6933,	0,99224,141978,167370,173446,177801,178120,178795,179654,
#Partially deleted in new
chrX	67544035	67730619	chrX:67544035-67730619	3	+	67545146	67723841	0	8	2727,152,117,288,145,131,158,6934,	0,99220,141974,167366,173442,177797,178791,179650,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	67544819	67696075	chrX:67544819-67696075	1	+	67545146	67694722	0	4	1943,152,117,1403,	0,98436,141190,149853,
#Partially deleted in new
chrX	67544819	67689763	chrX:67544819-67689763	0	+	67544819	67544819	8553170	4	1943,152,117,208,	0,98436,141190,144736,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	67544819	67696075	chrX:67544819-67696075	0	+	67545146	67680754	789624	5	1943,152,284,117,1403,	0,98436,135900,141190,149853,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	67544819	67696075	chrX:67544819-67696075	1	+	67545146	67680883	789624	6	1943,152,32,249,117,1403,	0,98436,135900,135935,141190,149853,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	67544819	67696075	chrX:67544819-67696075	1	+	67545146	67686043	789624	3	1943,186,1403,	0,141121,149853,
#Partially deleted in new
chrX	67568888	67724288	chrX:67568888-67724288	1	+	67569002	67723841	0	8	134,152,117,288,145,131,158,603,	0,74367,117121,142513,148589,152944,153938,154797,
#Partially deleted in new
chrX	67791954	67792895	chrX:67791954-67792895	7	-	67791954	67791954	16724991	1	941,	0,
#Partially deleted in new
chrX	68013469	68014901	chrX:68013469-68014901	3	-	68013469	68013469	8553170	1	1432,	0,
#Boundary problem: need 25, got 0, diff 25, mapped 0.0
chrX	68042343	68433805	chrX:68042343-68433805	3	-	68048423	68433020	789624	25	4820,42,51,166,324,148,160,106,59,85,75,63,34,79,92,101,130,105,111,102,72,62,96,158,638,	0,6072,10196,11301,21510,30808,54526,69510,70837,76904,150575,151546,152121,154842,159275,164229,167809,169764,171518,192143,232394,240712,256657,390523,390824,
#Partially deleted in new
chrX	68063853	68112422	chrX:68063853-68112422	0	-	68063853	68063853	8553170	5	324,148,160,106,36,	0,9298,33016,48000,48533,
#Partially deleted in new
chrX	68070519	68071767	chrX:68070519-68071767	7	-	68070519	68070519	16724991	1	1248,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	68102067	68102132	chrX:68102067-68102132	3	-	68102067	68102067	8553170	1	65,	0,
#Deleted in new
chrX	68132867	68133437	chrX:68132867-68133437	7	+	68132867	68132867	16724991	1	570,	0,
#Partially deleted in new
chrX	68192741	68210268	chrX:68192741-68210268	0	-	68192741	68192741	8553170	7	252,63,34,79,92,101,116,	0,1148,1723,4444,8877,13831,17411,
#Deleted in new
chrX	68432930	68433913	chrX:68432930-68433913	0	-	68432930	68432930	8553170	2	94,283,	0,700,
#Partially deleted in new
chrX	68474709	68476874	chrX:68474709-68476874	7	+	68474709	68474709	16724991	3	390,511,114,	0,929,2051,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	68498322	68537285	chrX:68498322-68537285	3	+	68499066	68531999	789624	7	801,129,79,43,126,158,5405,	0,13526,15004,20447,23049,24437,33558,
#Partially deleted in new
chrX	68498561	68531982	chrX:68498561-68531982	0	+	68499066	68531982	789624	6	562,79,43,126,158,102,	0,14765,20208,22810,24198,33319,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	68498781	68537266	chrX:68498781-68537266	1	+	68499066	68531999	789624	6	342,79,43,126,158,5386,	0,14545,19988,22590,23978,33099,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	68499033	68515340	chrX:68499033-68515340	0	+	68499033	68499033	8553170	3	124,129,2014,	0,12815,14293,
#Partially deleted in new
chrX	68499048	68531970	chrX:68499048-68531970	0	+	68499048	68499048	8553170	7	109,129,79,43,126,158,90,	0,12800,14278,19721,22323,23711,32832,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	68511806	68513641	chrX:68511806-68513641	0	+	68511806	68511806	8553170	2	171,315,	0,1520,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	68539442	68539549	chrX:68539442-68539549	3	-	68539442	68539442	8553170	1	107,	0,
#Deleted in new
chrX	68600098	68600473	chrX:68600098-68600473	7	+	68600098	68600098	16724991	1	375,	0,
#Deleted in new
chrX	68645325	68645527	chrX:68645325-68645527	7	-	68645325	68645325	16724991	1	202,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	68647665	68656551	chrX:68647665-68656551	0	+	68647665	68647665	8553170	2	262,433,	0,8453,
#Partially deleted in new
chrX	68647668	68725840	chrX:68647668-68725840	3	+	68716374	68724422	789624	14	259,34,72,64,1418,174,160,199,211,115,225,218,177,1536,	0,17830,65245,68699,69543,71556,72595,73255,73867,74378,74753,75957,76276,76636,
#Partially deleted in new
chrX	68647668	68725842	chrX:68647668-68725842	0	+	68647882	68716375	789624	14	259,34,72,64,1418,174,160,199,211,115,225,218,177,1538,	0,17830,65245,68699,69543,71556,72595,73255,73867,74378,74753,75957,76276,76636,
#Partially deleted in new
chrX	68647767	68725836	chrX:68647767-68725836	1	+	68647882	68724422	789624	15	160,34,72,82,64,1418,174,160,199,211,115,225,218,177,1532,	0,17731,65146,67526,68600,69444,71457,72496,73156,73768,74279,74654,75858,76177,76537,
#Partially deleted in new
chrX	68693650	68725833	chrX:68693650-68725833	1	+	68716374	68724422	789624	14	176,72,82,64,1418,174,160,199,211,115,225,218,177,1529,	0,19263,21643,22717,23561,25574,26613,27273,27885,28396,28771,29975,30294,30654,
#Deleted in new
chrX	68771321	68772578	chrX:68771321-68772578	7	+	68771321	68771321	16724991	1	1257,	0,
#Partially deleted in new
chrX	68783471	68785066	chrX:68783471-68785066	7	+	68783471	68783471	16724991	2	317,843,	0,752,
#Deleted in new
chrX	68828996	68842147	chrX:68828996-68842147	3	+	68829776	68840654	789624	5	908,278,93,129,1906,	0,9620,10667,10963,11245,
#Deleted in new
chrX	69160850	69162694	chrX:69160850-69162694	0	-	69161191	69162694	789624	2	394,150,	0,1694,
#Deleted in new
chrX	69160853	69163545	chrX:69160853-69163545	1	-	69161306	69163238	0	1	2692,	0,
#Deleted in new
chrX	69160853	69165437	chrX:69160853-69165437	1	-	69161306	69163238	0	3	1528,521,66,	0,2092,4518,
#Deleted in new
chrX	69160861	69165521	chrX:69160861-69165521	3	-	69161306	69163238	0	2	2605,150,	0,4510,
#Deleted in new
chrX	69160890	69165793	chrX:69160890-69165793	1	-	69161306	69163073	0	2	2250,422,	0,4481,
#Deleted in new
chrX	69162325	69165449	chrX:69162325-69165449	0	-	69162325	69162325	8553170	2	809,78,	0,3046,
#Deleted in new
chrX	69162804	69165451	chrX:69162804-69165451	0	-	69162804	69163238	789624	2	494,80,	0,2567,
#Deleted in new
chrX	69174123	69174717	chrX:69174123-69174717	7	+	69174123	69174123	16724991	1	594,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	69179556	69209924	chrX:69179556-69209924	3	+	69179556	69179556	789624	5	89,156,118,137,1673,	0,21920,24775,25334,28695,
#Deleted in new
chrX	69485342	69485652	chrX:69485342-69485652	7	-	69485342	69485342	16724991	1	310,	0,
#Partially deleted in new
chrX	69505240	69532508	chrX:69505240-69532508	3	+	69505282	69529956	789624	3	903,172,2938,	0,23752,24330,
#Deleted in new
chrX	69569668	69570357	chrX:69569668-69570357	3	-	69569668	69569668	8553170	2	348,107,	0,582,
#Deleted in new
chrX	69616066	69617299	chrX:69616066-69617299	1	+	69616308	69616752	0	1	1233,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	69616066	69957504	chrX:69616066-69957504	0	+	69616066	69616066	8553170	2	638,478,	0,340960,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	69616066	70039469	chrX:69616066-70039469	1	+	69616308	70035609	0	8	638,106,24,180,35,52,131,4112,	0,340960,407151,411790,413437,414402,417331,419291,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	69616066	70039469	chrX:69616066-70039469	3	+	69616308	70035609	0	8	638,106,24,180,35,52,125,4112,	0,340960,407151,411790,413437,414402,417331,419291,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	69616066	69957504	chrX:69616066-69957504	0	+	69616066	69616066	8553170	3	638,51,478,	0,4829,340960,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	69616066	69861061	chrX:69616066-69861061	1	+	69616308	69860868	0	2	638,205,	0,244790,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	69616066	69861061	chrX:69616066-69861061	1	+	69616308	69670260	0	3	638,84,205,	0,54143,244790,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	69616066	69957477	chrX:69616066-69957477	0	+	69616066	69616066	8553170	4	638,36,337,451,	0,113076,244790,340960,
#Partially deleted in new
chrX	69616116	70035637	chrX:69616116-70035637	1	+	69616308	70035609	0	8	588,106,24,180,35,52,116,280,	0,340910,407101,411740,413387,414352,417290,419241,
#Partially deleted in new
chrX	69620409	70033410	chrX:69620409-70033410	0	+	69957026	70033410	789624	8	96,51,106,24,180,35,52,13,	0,486,336617,402808,407447,409094,410059,412988,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	69620455	69861061	chrX:69620455-69861061	0	+	69620455	69620455	8553170	3	50,84,205,	0,49754,240401,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	69692955	69693155	chrX:69692955-69693155	3	+	69692955	69692955	8553170	1	200,	0,
#Deleted in new
chrX	69937165	69938017	chrX:69937165-69938017	7	-	69937165	69937165	16724991	1	852,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	69957023	70039469	chrX:69957023-70039469	1	+	69957026	70035609	789624	7	109,24,180,35,52,131,4112,	0,66194,70833,72480,73445,76374,78334,
#Deleted in new
chrX	70022856	70022923	chrX:70022856-70022923	3	+	70022856	70022856	5263520	1	67,	0,
#Partially deleted in new
chrX	70040541	70049938	chrX:70040541-70049938	3	-	70041807	70049932	789624	8	1081,190,200,175,205,71,111,91,	0,1231,1645,2527,2936,3384,3810,9306,
#Deleted in new
chrX	70041479	70043583	chrX:70041479-70043583	0	-	70042338	70043583	789624	5	143,190,372,175,106,	0,293,707,1589,1998,
#Partially deleted in new
chrX	70042911	70043994	chrX:70042911-70043994	0	-	70042911	70042911	8553170	3	332,205,69,	0,566,1014,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	70062490	70064179	chrX:70062490-70064179	3	+	70062524	70063391	789624	1	1689,	0,
#Partially deleted in new
chrX	70120352	70121474	chrX:70120352-70121474	7	-	70120352	70120352	16724991	1	1122,	0,
#Partially deleted in new
chrX	70124971	70129071	chrX:70124971-70129071	7	-	70124971	70124971	16724991	5	83,142,751,235,132,	0,374,1082,2156,3968,
#Partially deleted in new
chrX	70133448	70166324	chrX:70133448-70166324	3	+	70133947	70165981	0	6	687,294,196,80,113,492,	0,1074,13184,15312,16761,32384,
#Partially deleted in new
chrX	70133462	70166324	chrX:70133462-70166324	1	+	70133947	70165981	0	7	78,413,294,196,80,113,492,	0,260,1060,13170,15298,16747,32370,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	70163841	70165206	chrX:70163841-70165206	3	-	70163841	70163841	8553170	2	287,255,	0,1110,
#Partially deleted in new
chrX	70177482	70205545	chrX:70177482-70205545	3	+	70177582	70205106	789624	7	185,111,71,205,175,212,594,	0,21788,22329,22772,24407,26822,27469,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	70222005	70222314	chrX:70222005-70222314	3	-	70222005	70222005	8553170	1	309,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	70234654	70240627	chrX:70234654-70240627	3	+	70234695	70240290	789624	7	117,108,71,205,172,200,492,	0,1061,1414,2389,3557,5080,5481,
#Deleted in new
chrX	70234654	70237317	chrX:70234654-70237317	0	+	70234654	70234654	8553170	4	117,108,71,274,	0,1061,1414,2389,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	70253041	70253162	chrX:70253041-70253162	7	+	70253041	70253041	16724991	1	121,	0,
#Deleted in new
chrX	70258169	70259764	chrX:70258169-70259764	3	-	70258526	70259624	0	1	1595,	0,
#Partially deleted in new
chrX	70268304	70281232	chrX:70268304-70281232	1	+	70269385	70281112	0	16	68,38,31,61,45,200,60,68,136,85,73,138,84,24,53,134,	0,1051,1357,1538,1795,7777,8128,8364,9089,9411,9761,10199,11890,12254,12461,12794,
#Deleted in new
chrX	70268333	70270009	chrX:70268333-70270009	0	+	70268333	70268333	8553170	3	39,38,348,	0,1022,1328,
#Partially deleted in new
chrX	70268334	70281840	chrX:70268334-70281840	1	+	70269385	70281766	789624	16	38,38,31,61,45,200,60,68,136,85,73,138,84,24,53,175,	0,1021,1327,1508,1765,7747,8098,8334,9059,9381,9731,10169,11860,12224,12431,13331,
#Partially deleted in new
chrX	70268345	70276707	chrX:70268345-70276707	0	+	70276089	70276707	789624	8	27,38,79,61,45,200,60,39,	0,1010,1316,1497,1754,7736,8087,8323,
#Partially deleted in new
chrX	70268351	70281840	chrX:70268351-70281840	3	+	70269385	70281766	0	17	21,38,31,61,45,200,60,68,136,85,73,138,84,24,53,10,165,	0,1004,1310,1491,1748,7730,8081,8317,9042,9364,9714,10152,11843,12207,12414,12747,13324,
#Deleted in new
chrX	70282092	70283287	chrX:70282092-70283287	0	+	70282561	70283287	789624	3	499,54,20,	0,709,1175,
#Deleted in new
chrX	70282171	70285002	chrX:70282171-70285002	3	+	70282217	70284643	789624	8	170,56,54,106,112,94,64,415,	0,364,630,1096,1341,1778,2094,2416,
#Deleted in new
chrX	70282171	70285002	chrX:70282171-70285002	1	+	70282217	70284643	789624	8	170,59,54,106,112,94,64,415,	0,361,630,1096,1341,1778,2094,2416,
#Partially deleted in new
chrX	70286594	70289979	chrX:70286594-70289979	3	-	70287081	70289341	789624	7	522,61,99,57,84,100,120,	0,681,1137,1522,1835,2660,3265,
#Partially deleted in new
chrX	70286891	70289945	chrX:70286891-70289945	1	-	70287081	70289341	789624	8	225,61,99,57,84,100,72,86,	0,384,840,1225,1538,2363,2630,2968,
#Partially deleted in new
chrX	70287734	70289913	chrX:70287734-70289913	0	-	70287734	70287734	8553170	5	96,57,84,339,54,	0,382,695,1520,2125,
#Partially deleted in new
chrX	70287766	70290514	chrX:70287766-70290514	0	-	70287766	70287766	8553170	5	64,57,84,100,111,	0,350,663,1488,2637,
#Partially deleted in new
chrX	70290089	70420832	chrX:70290089-70420832	3	+	70290458	70420265	789624	31	61,141,115,191,90,167,95,117,176,62,133,59,106,57,186,104,145,111,84,114,156,101,130,171,108,78,96,183,117,123,771,	0,348,601,6908,9023,11810,12214,39315,40067,43538,51709,53613,53787,62510,63532,84061,85114,86010,96528,97094,105581,105859,112476,113774,114625,115738,116169,116803,127798,129571,129972,
#Partially deleted in new
chrX	70290111	70297188	chrX:70290111-70297188	0	+	70290111	70290111	8553170	4	224,141,115,191,	0,326,579,6886,
#Partially deleted in new
chrX	70361485	70362374	chrX:70361485-70362374	7	-	70361485	70361485	16724991	2	144,205,	0,684,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	70396278	70396375	chrX:70396278-70396375	3	+	70396278	70396278	8553170	1	97,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chrX	70423030	70433390	chrX:70423030-70433390	1	+	70424984	70433086	789624	17	352,114,104,94,60,99,94,146,83,151,222,149,153,148,83,29,357,	0,1945,2323,2732,3021,3340,3617,3835,4106,4282,6462,6884,7943,9276,9548,9881,10003,
#Partially deleted in new
chrX	70423030	70433390	chrX:70423030-70433390	1	+	70425790	70433086	789624	15	352,104,94,60,99,94,146,83,151,222,149,148,83,29,357,	0,2323,2732,3021,3340,3617,3835,4106,4282,6462,6884,9276,9548,9881,10003,
#Partially deleted in new
chrX	70423030	70433390	chrX:70423030-70433390	1	+	70425790	70433086	789624	14	352,94,60,99,94,146,83,151,222,149,148,83,29,357,	0,2732,3021,3340,3617,3835,4106,4282,6462,6884,9276,9548,9881,10003,
#Partially deleted in new
chrX	70423140	70433384	chrX:70423140-70433384	3	+	70424984	70433086	789624	16	242,114,104,94,60,99,94,146,83,151,222,149,148,83,29,351,	0,1835,2213,2622,2911,3230,3507,3725,3996,4172,6352,6774,9166,9438,9771,9893,
#Partially deleted in new
chrX	70425820	70433380	chrX:70425820-70433380	0	+	70425820	70425820	8553170	11	36,60,99,146,83,151,571,148,83,29,347,	0,231,550,1045,1316,1492,3672,6486,6758,7091,7213,
#Partially deleted in new
chrX	70427449	70435350	chrX:70427449-70435350	3	-	70427449	70427449	8553170	3	463,394,672,	0,6405,7229,
#Partially deleted in new
chrX	70444860	70505490	chrX:70444860-70505490	1	+	70445201	70502269	789624	21	698,54,51,125,170,137,145,160,157,103,115,177,76,46,42,51,102,173,110,92,3328,	0,3719,4052,4498,4829,5308,5778,7006,8776,9353,34289,47246,47660,50547,52319,53659,54315,55016,55610,56037,57302,
#Partially deleted in new
chrX	70444968	70505487	chrX:70444968-70505487	3	+	70445201	70502269	0	19	590,51,125,170,137,145,160,157,103,115,177,76,46,51,102,173,110,92,3325,	0,3944,4390,4721,5200,5670,6898,8668,9245,34181,47138,47552,50439,53551,54207,54908,55502,55929,57194,
#Partially deleted in new
chrX	70445135	70503946	chrX:70445135-70503946	0	+	70445135	70445135	8553170	19	423,51,125,170,615,160,157,103,115,177,76,100,42,51,102,173,110,92,1784,	0,3777,4223,4554,5033,6731,8501,9078,34014,46971,47385,48240,52044,53384,54040,54741,55335,55762,57027,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	70450878	70451022	chrX:70450878-70451022	3	+	70450878	70450878	8553170	1	144,	0,
#Partially deleted in new
chrX	70452304	70505487	chrX:70452304-70505487	1	+	70452621	70502269	0	14	451,157,103,115,177,76,100,42,51,102,173,110,92,3325,	0,1332,1909,26845,39802,40216,41071,44875,46215,46871,47572,48166,48593,49858,
#Deleted in new
chrX	70452957	70455826	chrX:70452957-70455826	3	-	70452957	70452957	789624	2	349,83,	0,2786,
#Deleted in new
chrX	70452961	70455994	chrX:70452961-70455994	0	-	70452961	70452961	789624	2	345,50,	0,2983,
#Partially deleted in new
chrX	70455095	70505485	chrX:70455095-70505485	1	+	70479193	70502269	0	12	168,115,177,76,100,42,51,102,173,110,92,3323,	0,24054,37011,37425,38280,42084,43424,44080,44781,45375,45802,47067,
#Partially deleted in new
chrX	70455102	70498558	chrX:70455102-70498558	0	+	70455102	70455102	8553170	7	161,115,177,76,100,42,39,	0,24047,37004,37418,38273,42077,43417,
#Partially deleted in new
chrX	70455106	70492237	chrX:70455106-70492237	0	+	70455106	70455106	8553170	4	157,316,115,131,	0,680,24043,37000,
#Partially deleted in new
chrX	70479117	70499903	chrX:70479117-70499903	0	+	70479117	70479117	8553170	9	147,177,76,100,46,42,51,102,27,	0,12989,13403,14258,16290,18062,19402,20058,20759,
#Deleted in new
chrX	70497164	70502371	chrX:70497164-70502371	0	+	70497164	70497164	8553170	7	57,51,102,173,110,92,209,	0,1355,2011,2712,3306,3733,4998,
#Deleted in new
chrX	70499964	70500989	chrX:70499964-70500989	0	+	70499964	70499964	8553170	2	85,519,	0,506,
#Partially deleted in new
chrX	70528939	70908731	chrX:70528939-70908731	1	-	70529094	70907789	789624	30	248,165,121,109,150,73,117,71,87,41,57,86,125,103,138,86,152,79,82,96,55,86,81,120,81,80,85,122,58,78,	0,895,23186,24366,25711,62811,76461,78019,80151,81563,95010,95899,100671,122510,141437,149864,153734,193678,196322,211761,215225,277765,304573,324094,324308,331917,344283,351048,378813,379714,
#Partially deleted in new
chrX	70528940	70724292	chrX:70528940-70724292	1	-	70529094	70722691	789624	19	247,165,121,109,150,73,117,71,87,41,57,86,125,103,138,86,152,79,217,	0,894,23185,24365,25710,62810,76460,78018,80150,81562,95009,95898,100670,122509,141436,149863,153733,193677,195135,
#Boundary problem: need 31, got 0, diff 31, mapped 0.0
chrX	70528940	70908711	chrX:70528940-70908711	3	-	70529094	70897546	789624	31	247,165,121,109,150,73,117,71,87,41,57,86,125,103,138,86,152,79,82,96,55,86,81,120,81,80,85,122,122,58,58,	0,894,23185,24365,25710,62810,76460,78018,80150,81562,95009,95898,100670,122509,141436,149863,153733,193677,196321,211760,215224,277764,304572,324093,324307,331916,344282,351047,368524,378812,379713,
#Partially deleted in new
chrX	70672894	70673515	chrX:70672894-70673515	7	-	70672894	70672894	16724991	2	204,93,	0,528,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	70846078	70846295	chrX:70846078-70846295	3	-	70846078	70846078	5263520	1	217,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	70846079	70846295	chrX:70846079-70846295	3	-	70846079	70846079	5263520	1	216,	0,
#Partially deleted in new
chrX	70857162	70857502	chrX:70857162-70857502	7	+	70857162	70857162	16724991	1	340,	0,
#Partially deleted in new
chrX	70925581	70931096	chrX:70925581-70931096	1	-	70925812	70929997	789624	12	362,109,167,167,103,140,223,113,178,159,395,120,	0,488,945,1293,1700,1902,2216,2563,2874,3262,4046,5395,
#Partially deleted in new
chrX	70925587	70931125	chrX:70925587-70931125	3	-	70925812	70929997	789624	12	356,109,167,167,103,140,223,113,178,159,371,149,	0,482,939,1287,1694,1896,2210,2557,2868,3256,4040,5389,
#Deleted in new
chrX	70962963	70963293	chrX:70962963-70963293	7	+	70962963	70962963	16724991	1	330,	0,
#Partially deleted in new
chrX	71016530	71016905	chrX:71016530-71016905	7	-	71016530	71016530	16724991	1	375,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	71020274	71020438	chrX:71020274-71020438	3	-	71020274	71020274	8553170	1	164,	0,
#Partially deleted in new
chrX	71043213	71045470	chrX:71043213-71045470	7	-	71043213	71043213	16724991	3	230,585,751,	0,594,1506,
#Partially deleted in new
chrX	71059243	71062931	chrX:71059243-71062931	0	-	71059243	71059243	8553170	4	406,91,125,78,	0,1784,2599,3610,
#Partially deleted in new
chrX	71059245	71068423	chrX:71059245-71068423	1	-	71061015	71068306	789624	4	1873,125,96,282,	0,2597,3608,8896,
#Partially deleted in new
chrX	71059248	71073426	chrX:71059248-71073426	3	-	71061015	71068306	789624	5	1870,125,96,181,150,	0,2594,3605,8893,14028,
#Partially deleted in new
chrX	71059892	71068323	chrX:71059892-71068323	0	-	71059892	71059892	8553170	3	584,96,182,	0,2961,8249,
#Partially deleted in new
chrX	71060515	71068388	chrX:71060515-71068388	0	-	71060515	71060515	8553170	3	603,96,247,	0,2338,7626,
#Partially deleted in new
chrX	71060869	71068403	chrX:71060869-71068403	1	-	71061015	71068306	789624	4	249,125,96,250,	0,973,1984,7284,
#Deleted in new
chrX	71096196	71103535	chrX:71096196-71103535	3	+	71096528	71102084	0	3	785,1057,1459,	0,4487,5880,
#Deleted in new
chrX	71096252	71100772	chrX:71096252-71100772	0	+	71096252	71096252	8553170	3	447,121,89,	0,608,4431,
#Deleted in new
chrX	71096528	71102084	chrX:71096528-71102084	1	+	71096528	71102084	0	4	171,117,1057,8,	0,336,4155,5548,
#Deleted in new
chrX	71099307	71100843	chrX:71099307-71100843	0	+	71099307	71099307	8553170	2	146,160,	0,1376,
#Partially deleted in new
chrX	71103888	71106788	chrX:71103888-71106788	0	-	71106101	71106556	789624	6	224,107,69,138,68,257,	0,409,880,2111,2470,2643,
#Partially deleted in new
chrX	71103986	71106605	chrX:71103986-71106605	3	-	71103986	71106556	789624	6	126,107,69,138,87,74,	0,311,782,2013,2353,2545,
#Deleted in new
chrX	71103986	71104448	chrX:71103986-71104448	0	-	71103986	71103986	8553170	2	126,151,	0,311,
#Partially deleted in new
chrX	71103986	71111571	chrX:71103986-71111571	0	-	71103986	71103986	8553170	13	126,107,69,138,87,59,69,70,97,163,140,185,675,	0,311,782,2013,2353,2545,3866,4290,4612,5241,6169,6517,6910,
#Partially deleted in new
chrX	71103986	71111571	chrX:71103986-71111571	0	-	71106578	71111539	789624	13	126,107,69,138,87,131,70,97,163,140,185,154,147,	0,311,782,2013,2353,2545,4290,4612,5241,6169,6517,6910,7438,
#Partially deleted in new
chrX	71103990	71111575	chrX:71103990-71111575	0	-	71106578	71111539	789624	14	122,107,69,138,73,59,69,70,97,163,140,185,154,151,	0,307,778,2009,2363,2541,3862,4286,4608,5237,6165,6513,6906,7434,
#Partially deleted in new
chrX	71103990	71111571	chrX:71103990-71111571	3	-	71106662	71111539	789624	12	122,107,69,427,239,70,97,163,140,185,154,147,	0,307,778,2009,2541,4286,4608,5237,6165,6513,6906,7434,
#Partially deleted in new
chrX	71103993	71111571	chrX:71103993-71111571	0	-	71103993	71103993	8553170	11	119,107,69,138,68,172,70,97,163,185,675,	0,304,775,2006,2365,2538,4283,4605,5234,6510,6903,
#Partially deleted in new
chrX	71103993	71111571	chrX:71103993-71111571	0	-	71103993	71103993	8553170	12	119,107,69,138,68,59,69,70,163,140,185,675,	0,304,775,2006,2365,2538,3859,4283,5234,6162,6510,6903,
#Partially deleted in new
chrX	71103993	71111571	chrX:71103993-71111571	0	-	71106578	71111539	789624	12	119,107,69,427,59,70,97,163,140,185,154,147,	0,304,775,2006,2538,4283,4605,5234,6162,6510,6903,7431,
#Partially deleted in new
chrX	71103993	71111571	chrX:71103993-71111571	0	-	71106662	71111539	789624	13	119,107,69,138,87,239,70,97,163,140,185,154,147,	0,304,775,2006,2346,2538,4283,4605,5234,6162,6510,6903,7431,
#Partially deleted in new
chrX	71104082	71111529	chrX:71104082-71111529	0	-	71104082	71104082	8553170	12	30,107,69,138,68,131,70,97,163,140,185,633,	0,215,686,1917,2276,2449,4194,4516,5145,6073,6421,6814,
#Deleted in new
chrX	71106000	71106570	chrX:71106000-71106570	0	-	71106000	71106000	8553170	2	426,39,	0,531,
#Partially deleted in new
chrX	71107403	71111550	chrX:71107403-71111550	0	-	71107403	71107403	8553170	6	518,70,97,163,533,654,	0,873,1195,1824,2752,3493,
#Partially deleted in new
chrX	71107403	71111631	chrX:71107403-71111631	3	-	71107735	71111539	0	8	518,70,97,163,140,185,154,207,	0,873,1195,1824,2752,3100,3493,4021,
#Partially deleted in new
chrX	71107408	71111631	chrX:71107408-71111631	1	-	71107735	71109268	789624	7	513,70,163,140,185,154,207,	0,868,1819,2747,3095,3488,4016,
#Partially deleted in new
chrX	71107408	71111606	chrX:71107408-71111606	0	-	71107408	71107408	8553170	5	1287,163,185,154,182,	0,1819,3095,3488,4016,
#Partially deleted in new
chrX	71107715	71110162	chrX:71107715-71110162	0	-	71108320	71110162	789624	4	206,70,163,7,	0,561,1512,2440,
#Partially deleted in new
chrX	71107735	71111448	chrX:71107735-71111448	1	-	71107735	71111448	0	5	186,70,97,163,24,	0,541,863,1492,3689,
#Partially deleted in new
chrX	71108661	71112108	chrX:71108661-71112108	0	-	71108661	71111033	789624	7	34,163,140,185,154,70,37,	0,566,1494,1842,2235,2763,3410,
#Deleted in new
chrX	71110185	71111560	chrX:71110185-71111560	0	-	71110185	71110185	8553170	3	110,185,664,	0,318,711,
#Deleted in new
chrX	71110596	71111554	chrX:71110596-71111554	0	-	71110596	71111448	789624	3	92,154,158,	0,300,800,
#Partially deleted in new
chrX	71118555	71142453	chrX:71118555-71142453	1	+	71120076	71142218	789624	45	298,105,192,157,182,111,255,147,100,137,132,127,230,81,171,145,51,119,144,164,132,228,145,121,102,114,176,180,72,134,162,112,90,110,136,162,375,151,206,78,218,223,141,82,279,	0,817,1130,1458,2415,2771,3006,3644,3952,4182,4539,5038,5603,6208,6420,6795,7107,7480,7785,8413,8780,9337,9740,10042,10558,10760,11124,11479,12994,13517,13821,14289,14567,15801,16157,16536,17725,18323,18631,19002,19170,22079,22674,23327,23619,
#Partially deleted in new
chrX	71118694	71142454	chrX:71118694-71142454	1	+	71118754	71142218	789624	45	159,105,192,157,182,111,255,147,100,137,132,127,230,81,171,145,51,119,144,164,132,228,145,121,102,114,176,180,72,134,162,112,90,110,136,162,375,151,197,75,218,223,141,82,280,	0,678,991,1319,2276,2632,2867,3505,3813,4043,4400,4899,5464,6069,6281,6656,6968,7341,7646,8274,8641,9198,9601,9903,10419,10621,10985,11340,12855,13378,13682,14150,14428,15662,16018,16397,17586,18184,18492,18866,19031,21940,22535,23188,23480,
#Partially deleted in new
chrX	71118722	71142447	chrX:71118722-71142447	3	+	71118754	71142218	789624	45	131,105,192,157,182,111,255,147,100,137,132,127,230,81,171,145,51,119,144,164,132,228,145,121,102,114,176,180,72,134,162,112,90,110,136,162,375,151,197,78,218,223,141,82,273,	0,650,963,1291,2248,2604,2839,3477,3785,4015,4372,4871,5436,6041,6253,6628,6940,7313,7618,8246,8613,9170,9573,9875,10391,10593,10957,11312,12827,13350,13654,14122,14400,15634,15990,16369,17558,18156,18464,18835,19003,21912,22507,23160,23452,
#Deleted in new
chrX	71118834	71120052	chrX:71118834-71120052	0	+	71118834	71120052	789624	4	19,139,192,39,	0,504,851,1179,
#Deleted in new
chrX	71126260	71127386	chrX:71126260-71127386	0	+	71126260	71126260	8553170	3	224,164,51,	0,708,1075,
#Deleted in new
chrX	71126373	71127691	chrX:71126373-71127691	0	+	71126373	71126373	8553170	3	111,164,356,	0,595,962,
#Deleted in new
chrX	71128314	71128820	chrX:71128314-71128820	0	+	71128314	71128314	8553170	2	126,223,	0,283,
#Deleted in new
chrX	71129182	71129862	chrX:71129182-71129862	0	+	71129182	71129182	8553170	3	33,114,183,	0,133,497,
#Partially deleted in new
chrX	71136593	71140755	chrX:71136593-71140755	0	+	71136593	71140755	789624	7	62,151,197,78,55,88,121,	0,285,593,964,1132,1262,4041,
#Partially deleted in new
chrX	71144830	71171199	chrX:71144830-71171199	1	+	71147749	71170097	789624	6	134,657,150,186,790,1946,	0,2719,10383,19312,22180,24423,
#Partially deleted in new
chrX	71144835	71171114	chrX:71144835-71171114	1	+	71148100	71167565	789624	8	129,144,60,150,186,389,400,1861,	0,3227,8641,10378,19307,22175,22565,24418,
#Partially deleted in new
chrX	71144842	71171201	chrX:71144842-71171201	3	+	71147749	71170097	789624	7	122,657,60,150,186,790,1948,	0,2707,8634,10371,19300,22168,24411,
#Partially deleted in new
chrX	71144842	71167757	chrX:71144842-71167757	0	+	71147749	71167757	789624	5	122,657,150,186,747,	0,2707,10371,19300,22168,
#Partially deleted in new
chrX	71144861	71170293	chrX:71144861-71170293	1	+	71147749	71170097	789624	8	103,657,60,60,150,186,790,1040,	0,2688,3984,8615,10352,19281,22149,24392,
#Partially deleted in new
chrX	71153455	71171199	chrX:71153455-71171199	0	+	71153455	71153455	8553170	5	81,150,186,790,1946,	0,1758,10687,13555,15798,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	71183558	71198175	chrX:71183558-71198175	3	-	71183558	71183558	8553170	2	459,267,	0,14350,
#Partially deleted in new
chrX	71215193	71225200	chrX:71215193-71225200	1	+	71223707	71224559	0	2	78,1509,	0,8498,
#Partially deleted in new
chrX	71215211	71225516	chrX:71215211-71225516	3	+	71223707	71224559	0	2	79,1825,	0,8480,
#Partially deleted in new
chrX	71215211	71225215	chrX:71215211-71225215	1	+	71223707	71224559	0	2	79,1524,	0,8480,
#Partially deleted in new
chrX	71215238	71225200	chrX:71215238-71225200	1	+	71223707	71224559	0	4	52,183,116,1509,	0,7345,7981,8453,
#Partially deleted in new
chrX	71215258	71223960	chrX:71215258-71223960	0	+	71223707	71223960	789624	3	32,183,269,	0,7325,8433,
#Partially deleted in new
chrX	71217651	71223995	chrX:71217651-71223995	0	+	71223707	71223995	789624	2	244,304,	0,6040,
#Deleted in new
chrX	71223205	71225198	chrX:71223205-71225198	1	+	71223707	71224559	0	2	130,1507,	0,486,
#Partially deleted in new
chrX	71239623	71254140	chrX:71239623-71254140	3	-	71240915	71253255	789624	25	1485,118,255,115,152,169,104,147,175,113,160,98,166,173,151,87,116,151,219,178,295,67,44,686,112,	0,1603,2546,3346,4205,4678,5166,5715,6044,6362,6729,6971,7721,8110,8538,8814,9062,9395,9837,10402,10808,11554,11934,12965,14405,
#Partially deleted in new
chrX	71239623	71255146	chrX:71239623-71255146	1	-	71240915	71253255	789624	25	1485,118,255,115,152,169,104,147,175,113,160,62,166,173,151,87,116,151,219,178,295,67,44,686,679,	0,1603,2546,3346,4205,4678,5166,5715,6044,6362,6729,7007,7721,8110,8538,8814,9062,9395,9837,10402,10808,11554,11934,12965,14844,
#Partially deleted in new
chrX	71239625	71254129	chrX:71239625-71254129	1	-	71240915	71253255	789624	24	1483,118,115,152,148,104,147,175,113,160,98,166,173,151,87,116,151,219,178,295,73,44,686,101,	0,1601,3344,4203,4697,5164,5713,6042,6360,6727,6969,7719,8108,8536,8812,9060,9393,9835,10400,10806,11552,11932,12963,14403,
#Partially deleted in new
chrX	71239625	71255060	chrX:71239625-71255060	1	-	71240915	71253255	789624	25	1483,118,255,115,152,169,104,147,175,113,160,98,166,173,151,87,116,151,219,178,295,73,44,686,593,	0,1601,2544,3344,4203,4676,5164,5713,6042,6360,6727,6969,7719,8108,8536,8812,9060,9393,9835,10400,10806,11552,11932,12963,14842,
#Partially deleted in new
chrX	71239625	71254127	chrX:71239625-71254127	0	-	71239625	71239625	8553170	24	1483,118,255,115,152,148,104,147,175,113,160,98,562,151,87,116,151,219,178,295,67,44,686,99,	0,1601,2544,3344,4203,4697,5164,5713,6042,6360,6727,6969,7719,8536,8812,9060,9393,9835,10400,10806,11552,11932,12963,14403,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	71243616	71244470	chrX:71243616-71244470	0	-	71243616	71243616	8553170	2	364,169,	0,685,
#Deleted in new
chrX	71249200	71254140	chrX:71249200-71254140	1	-	71249442	71253255	789624	7	479,178,295,73,44,686,112,	0,825,1231,1977,2357,3388,4828,
#Deleted in new
chrX	71249203	71254575	chrX:71249203-71254575	1	-	71249442	71253255	789624	7	476,178,295,67,44,686,95,	0,822,1228,1974,2354,3385,5277,
#Deleted in new
chrX	71249208	71254539	chrX:71249208-71254539	1	-	71249591	71253255	789624	6	471,178,73,44,686,59,	0,817,1969,2349,3380,5272,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	71283191	71301166	chrX:71283191-71301166	1	+	71291891	71300076	0	10	530,194,302,96,197,85,103,40,110,1225,	0,8587,11035,13373,13659,14185,14644,15277,15515,16750,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	71283582	71301168	chrX:71283582-71301168	3	+	71290637	71300076	0	12	139,57,163,194,302,96,197,85,103,40,110,1227,	0,814,7046,8196,10644,12982,13268,13794,14253,14886,15124,16359,
#Partially deleted in new
chrX	71283589	71300269	chrX:71283589-71300269	1	+	71290637	71300076	0	13	132,57,114,163,194,302,96,197,85,103,40,110,328,	0,807,1394,7039,8189,10637,12975,13261,13787,14246,14879,15117,16352,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	71283632	71301168	chrX:71283632-71301168	1	+	71290637	71300076	0	11	89,163,194,302,96,197,85,103,40,110,1227,	0,6996,8146,10594,12932,13218,13744,14203,14836,15074,16309,
#Partially deleted in new
chrX	71283651	71300269	chrX:71283651-71300269	0	+	71283651	71283651	8553170	5	70,96,40,110,328,	0,14191,14817,15055,16290,
#Partially deleted in new
chrX	71283652	71294302	chrX:71283652-71294302	0	+	71290637	71294302	789624	6	69,57,114,163,143,76,	0,744,1331,6976,8126,10574,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	71283671	71300855	chrX:71283671-71300855	0	+	71283671	71283671	8553170	3	50,10,337,	0,725,16847,
#Partially deleted in new
chrX	71283675	71297452	chrX:71283675-71297452	0	+	71290637	71297452	789624	7	46,57,163,194,122,197,76,	0,721,6953,8103,10551,13175,13701,
#Partially deleted in new
chrX	71283693	71294130	chrX:71283693-71294130	0	+	71283693	71283693	8553170	5	28,57,163,194,113,	0,703,6935,8085,10324,
#Partially deleted in new
chrX	71283760	71291821	chrX:71283760-71291821	0	+	71290637	71291821	789624	4	228,57,163,43,	0,636,6868,8018,
#Partially deleted in new
chrX	71284193	71294500	chrX:71284193-71294500	0	+	71290637	71294500	789624	5	38,57,163,194,274,	0,203,6435,7585,10033,
#Partially deleted in new
chrX	71291868	71297925	chrX:71291868-71297925	0	+	71291868	71297925	789624	6	104,131,96,197,85,90,	0,2529,4696,4982,5508,5967,
#Partially deleted in new
chrX	71291916	71297571	chrX:71291916-71297571	0	+	71291916	71291916	8553170	5	56,302,96,197,195,	0,2310,4648,4934,5460,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	71291994	71301168	chrX:71291994-71301168	0	+	71291994	71291994	8553170	9	1047,310,96,197,85,103,40,110,1227,	0,2224,4570,4856,5382,5841,6474,6712,7947,
#Partially deleted in new
chrX	71296860	71300316	chrX:71296860-71300316	0	+	71296860	71296860	8553170	5	187,85,673,110,375,	0,516,975,1846,3081,
#Deleted in new
chrX	71301733	71305371	chrX:71301733-71305371	3	+	71301806	71305192	789624	11	137,50,57,146,95,56,71,100,114,63,407,	0,403,543,677,1528,1727,1893,2078,2453,2808,3231,
#Deleted in new
chrX	71301760	71304234	chrX:71301760-71304234	0	+	71301760	71301760	8553170	6	110,95,56,71,100,48,	0,1501,1700,1866,2051,2426,
#Deleted in new
chrX	71301786	71305301	chrX:71301786-71305301	1	+	71302126	71305192	789624	10	400,57,146,95,56,71,100,114,63,337,	0,490,624,1475,1674,1840,2025,2400,2755,3178,
#Deleted in new
chrX	71303618	71304781	chrX:71303618-71304781	0	+	71303618	71303618	8553170	2	293,595,	0,568,
#Deleted in new
chrX	71303791	71304880	chrX:71303791-71304880	0	+	71303791	71303791	8553170	3	120,114,339,	0,395,750,
#Partially deleted in new
chrX	71314911	71315879	chrX:71314911-71315879	7	-	71314911	71314911	16724991	2	391,249,	0,719,
#Deleted in new
chrX	71352417	71352988	chrX:71352417-71352988	7	+	71352417	71352417	16724991	1	571,	0,
#Boundary problem: need 39, got 0, diff 39, mapped 0.0
chrX	71366238	71466004	chrX:71366238-71466004	1	+	71366314	71464046	0	39	256,115,117,120,242,219,219,208,177,128,108,174,174,105,201,142,131,81,150,120,176,179,214,166,212,109,99,178,68,123,93,85,68,117,6,126,157,178,2181,	0,1260,1815,8928,10711,11364,11996,12585,15504,16297,16522,16752,17723,18706,21022,21998,22499,23346,26330,26636,27062,27828,31014,32333,35289,40399,41335,41735,55070,56878,57735,57915,87931,88502,88768,92002,93313,94387,97585,
#Boundary problem: need 38, got 0, diff 38, mapped 0.0
chrX	71366263	71466005	chrX:71366263-71466005	1	+	71366314	71464046	0	38	231,115,117,120,179,219,219,208,177,128,108,174,174,105,201,142,131,81,150,120,176,179,214,166,212,109,99,178,68,123,93,85,68,117,126,157,178,2182,	0,1235,1790,8903,10749,11339,11971,12560,15479,16272,16497,16727,17698,18681,20997,21973,22474,23321,26305,26611,27037,27803,30989,32308,35264,40374,41310,41710,55045,56853,57710,57890,87906,88477,91977,93288,94362,97560,
#Partially deleted in new
chrX	71366304	71464046	chrX:71366304-71464046	1	+	71366314	71464046	0	38	190,115,117,120,242,219,219,208,177,128,108,174,174,105,201,142,131,81,150,120,176,179,214,166,212,109,99,178,68,123,93,85,68,117,126,157,178,223,	0,1194,1749,8862,10645,11298,11930,12519,15438,16231,16456,16686,17657,18640,20956,21932,22433,23280,26264,26570,26996,27762,30948,32267,35223,40333,41269,41669,55004,56812,57669,57849,87865,88436,91936,93247,94321,97519,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	71368665	71368968	chrX:71368665-71368968	3	+	71368665	71368665	8553170	1	303,	0,
#Deleted in new
chrX	71377006	71377985	chrX:71377006-71377985	0	+	71377006	71377006	8553170	2	185,383,	0,596,
#Partially deleted in new
chrX	71387085	71388301	chrX:71387085-71388301	0	+	71387085	71387085	8553170	2	376,65,	0,1151,
#Partially deleted in new
chrX	71387309	71389773	chrX:71387309-71389773	0	+	71387309	71387309	8553170	4	152,142,131,189,	0,927,1428,2275,
#Deleted in new
chrX	71388588	71389630	chrX:71388588-71389630	0	+	71388588	71388588	8553170	2	280,46,	0,996,
#Partially deleted in new
chrX	71394107	71406746	chrX:71394107-71406746	0	+	71394107	71406746	789624	5	138,211,166,212,109,	0,3148,4464,7420,12530,
#Partially deleted in new
chrX	71406645	71416737	chrX:71406645-71416737	0	+	71406645	71416691	789624	4	101,99,178,120,	0,928,1328,9972,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chrX	71406678	71530361	chrX:71406678-71530361	0	+	71406678	71528551	789624	15	68,99,178,68,123,93,85,68,117,6,126,157,178,184,649,	0,895,1295,14630,16438,17295,17475,47491,48062,48328,51562,52873,53947,121863,123034,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chrX	71406678	71530361	chrX:71406678-71530361	0	+	71406678	71528551	789624	15	68,99,178,68,123,93,85,68,117,126,102,157,178,184,649,	0,895,1295,14630,16438,17295,17475,47491,48062,51562,52471,52873,53947,121863,123034,
#Partially deleted in new
chrX	71413833	71414086	chrX:71413833-71414086	7	-	71413833	71413833	16724991	1	253,	0,
#Deleted in new
chrX	71420082	71420514	chrX:71420082-71420514	7	-	71420082	71420082	16724991	1	432,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	71423157	71530361	chrX:71423157-71530361	0	+	71423157	71423157	8553170	11	82,93,85,68,117,126,102,157,178,184,649,	0,816,996,31012,31583,35083,35992,36394,37468,105384,106555,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	71423157	71530355	chrX:71423157-71530355	0	+	71423157	71423157	8553170	11	82,93,85,68,117,117,102,157,178,184,643,	0,816,996,31012,31583,35083,35992,36394,37468,105384,106555,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	71423157	71530361	chrX:71423157-71530361	2	+	71423157	71423157	8553170	12	82,93,85,22,68,117,6,126,157,178,184,649,	0,816,996,18542,31012,31583,31849,35083,36394,37468,105384,106555,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	71423157	71530360	chrX:71423157-71530360	0	+	71423157	71423157	8553170	10	82,93,85,68,117,126,157,178,184,648,	0,816,996,31012,31583,35083,36394,37468,105384,106555,
#Partially deleted in new
chrX	71423977	71464313	chrX:71423977-71464313	0	+	71423977	71423977	8553170	9	89,85,68,117,126,157,178,248,181,	0,176,30192,30763,34263,35574,36648,39846,40155,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	71458272	71466504	chrX:71458272-71466504	0	+	71458272	71458272	8553170	5	94,102,157,178,237,	0,877,1279,2353,7995,
#Partially deleted in new
chrX	71459591	71460960	chrX:71459591-71460960	0	+	71459591	71459591	8553170	2	117,335,	0,1034,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	71459669	71532374	chrX:71459669-71532374	0	+	71459669	71459669	8553170	6	39,178,110,184,692,110,	0,956,25214,68872,70043,72595,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	71491065	71491167	chrX:71491065-71491167	3	-	71491065	71491065	8553170	1	102,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	71491681	71492449	chrX:71491681-71492449	5	-	71491681	71491681	16724991	1	768,	0,
#Deleted in new
chrX	71492082	71492928	chrX:71492082-71492928	7	-	71492082	71492082	16724991	1	846,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	71492311	71530525	chrX:71492311-71530525	0	+	71492311	71492311	789624	3	686,184,813,	0,36230,37401,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	71527813	71530225	chrX:71527813-71530225	7	-	71527813	71527813	16724991	2	835,710,	0,1702,
#Partially deleted in new
chrX	71533082	71575897	chrX:71533082-71575897	3	+	71533299	71573794	0	22	254,181,244,69,117,80,196,141,101,154,102,180,159,90,126,171,117,171,153,253,124,2278,	0,3095,4746,11484,14824,21430,22107,22871,23597,23869,24112,24410,26184,26505,28692,29764,30047,30246,31518,34417,34910,40537,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chrX	71533103	71574655	chrX:71533103-71574655	0	+	71533103	71533103	8553170	20	233,151,244,3457,80,141,101,154,102,180,159,90,126,171,117,171,153,253,124,1036,	0,3104,4725,11463,21409,22850,23576,23848,24091,24389,26163,26484,28671,29743,30026,30225,31497,34396,34889,40516,
#Partially deleted in new
chrX	71533122	71573816	chrX:71533122-71573816	1	+	71533299	71573794	0	22	214,151,244,69,117,80,196,141,101,154,102,180,159,90,126,171,117,171,153,253,124,197,	0,3085,4706,11444,14784,21390,22067,22831,23557,23829,24072,24370,26144,26465,28652,29724,30007,30206,31478,34377,34870,40497,
#Deleted in new
chrX	71533127	71536657	chrX:71533127-71536657	0	+	71533127	71533127	8553170	2	209,480,	0,3050,
#Partially deleted in new
chrX	71533299	71546280	chrX:71533299-71546280	0	+	71533299	71533299	8553170	5	37,181,244,69,70,	0,2878,4529,11267,12911,
#Partially deleted in new
chrX	71534300	71544624	chrX:71534300-71544624	0	+	71536191	71544624	789624	4	73,181,244,58,	0,1877,3528,10266,
#Deleted in new
chrX	71555812	71556968	chrX:71555812-71556968	0	+	71555812	71555812	8553170	3	282,101,17,	0,867,1139,
#Deleted in new
chrX	71556455	71557047	chrX:71556455-71557047	0	+	71556455	71556455	8553170	2	325,96,	0,496,
#Partially deleted in new
chrX	71564663	71567973	chrX:71564663-71567973	0	+	71564663	71564663	8553170	2	90,474,	0,2836,
#Partially deleted in new
chrX	71578410	71613583	chrX:71578410-71613583	3	+	71580821	71612982	789624	13	112,61,47,34,47,34,89,1089,67,145,139,205,722,	0,2409,13711,14126,15920,16335,19539,25177,27252,30562,32270,33944,34451,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	71580284	71613582	chrX:71580284-71613582	1	+	71580821	71612982	789624	12	596,47,34,47,34,89,1089,67,145,139,205,721,	0,11837,12252,14046,14461,17665,23303,25378,28688,30396,32070,32577,
#Partially deleted in new
chrX	71609065	71612854	chrX:71609065-71612854	0	+	71609065	71609065	8553170	3	52,139,500,	0,1615,3289,
#Deleted in new
chrX	71615915	71618510	chrX:71615915-71618510	1	-	71616364	71617612	789624	2	1788,73,	0,2522,
#Deleted in new
chrX	71615915	71618517	chrX:71615915-71618517	3	-	71616364	71618449	789624	2	1544,80,	0,2522,
#Deleted in new
chrX	71662997	71665755	chrX:71662997-71665755	5	-	71662997	71662997	16724991	6	171,42,46,77,157,203,	0,277,864,1195,1812,2555,
#Deleted in new
chrX	71662997	71664271	chrX:71662997-71664271	5	-	71662997	71662997	16724991	3	171,42,410,	0,277,864,
#Deleted in new
chrX	71663275	71666767	chrX:71663275-71666767	7	-	71663275	71663275	16724991	5	41,46,77,157,1215,	0,586,917,1534,2277,
#Deleted in new
chrX	71667541	71671524	chrX:71667541-71671524	1	+	71668139	71671247	789624	7	69,1008,157,77,46,42,164,	0,490,2017,2716,3070,3665,3819,
#Deleted in new
chrX	71667803	71671524	chrX:71667803-71671524	3	+	71667803	71671247	789624	6	1236,157,77,46,42,164,	0,1755,2454,2808,3403,3557,
#Deleted in new
chrX	71691931	71692179	chrX:71691931-71692179	7	+	71691931	71691931	16724991	1	248,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	71697195	71706455	chrX:71697195-71706455	3	+	71697195	71697195	789624	3	106,223,3784,	0,3625,5476,
#Deleted in new
chrX	71714370	71716387	chrX:71714370-71716387	0	-	71714370	71714370	8553170	5	174,42,46,77,193,	0,280,876,1204,1824,
#Deleted in new
chrX	71714375	71718151	chrX:71714375-71718151	3	-	71714651	71718151	789624	6	169,42,46,77,157,1224,	0,275,871,1199,1819,2552,
#Deleted in new
chrX	71719141	71721278	chrX:71719141-71721278	7	+	71719141	71719141	16724991	4	484,55,92,34,	0,777,1272,2103,
#Deleted in new
chrX	71719924	71720800	chrX:71719924-71720800	4	+	71719924	71719924	16724991	3	42,42,127,	0,601,749,
#Deleted in new
chrX	71736453	71736703	chrX:71736453-71736703	7	-	71736453	71736453	16724991	1	250,	0,
#Deleted in new
chrX	71744827	71745077	chrX:71744827-71745077	7	+	71744827	71744827	16724991	1	250,	0,
#Deleted in new
chrX	71760763	71763075	chrX:71760763-71763075	7	-	71760763	71760763	16724991	4	138,42,46,660,	0,244,845,1652,
#Deleted in new
chrX	71760774	71761661	chrX:71760774-71761661	4	-	71760774	71760774	16724991	3	127,42,53,	0,233,834,
#Deleted in new
chrX	71761560	71762433	chrX:71761560-71762433	5	-	71761560	71761560	16724991	2	94,466,	0,407,
#Deleted in new
chrX	71763423	71767199	chrX:71763423-71767199	3	+	71763423	71766923	789624	6	1224,157,77,46,42,169,	0,1800,2500,2859,3459,3607,
#Deleted in new
chrX	71765187	71767204	chrX:71765187-71767204	0	+	71765187	71765187	8553170	5	193,77,46,42,174,	0,736,1095,1695,1843,
#Partially deleted in new
chrX	71789385	71789636	chrX:71789385-71789636	7	-	71789385	71789385	16724991	1	251,	0,
#Partially deleted in new
chrX	71848774	71849004	chrX:71848774-71849004	7	+	71848774	71848774	16724991	1	230,	0,
#Partially deleted in new
chrX	71869762	71873295	chrX:71869762-71873295	7	-	71869762	71869762	16724991	5	41,46,77,157,1231,	0,593,919,1555,2302,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	71910817	72153286	chrX:71910817-72153286	3	+	71911087	72143574	789624	8	550,156,128,196,132,2331,133,10034,	0,221261,223273,223691,226276,227623,231414,232435,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	71965971	71966074	chrX:71965971-71966074	3	-	71965971	71965971	8553170	1	103,	0,
#Partially deleted in new
chrX	72027480	72134167	chrX:72027480-72134167	0	+	72027480	72027480	8553170	3	219,156,77,	0,104598,106610,
#Deleted in new
chrX	72044544	72044892	chrX:72044544-72044892	7	+	72044544	72044544	16724991	1	348,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	72069658	72153286	chrX:72069658-72153286	1	+	72069686	72143574	789624	4	95,2331,133,10034,	0,68782,72573,73594,
#Partially deleted in new
chrX	72079775	72142364	chrX:72079775-72142364	0	+	72080223	72142364	789624	3	491,2331,133,	0,58665,62456,
#Partially deleted in new
chrX	72127109	72131901	chrX:72127109-72131901	0	-	72129830	72131540	789624	2	601,3738,	0,1054,
#Partially deleted in new
chrX	72127723	72131828	chrX:72127723-72131828	3	-	72129830	72131540	789624	1	4105,	0,
#Partially deleted in new
chrX	72132074	72143574	chrX:72132074-72143574	1	+	72132074	72143574	789624	7	160,128,196,132,2331,133,322,	0,2016,2434,5019,6366,10157,11178,
#Partially deleted in new
chrX	72133648	72141362	chrX:72133648-72141362	0	+	72133648	72133648	8553170	2	1056,2922,	0,4792,
#Partially deleted in new
chrX	72134149	72141257	chrX:72134149-72141257	1	+	72138646	72140776	789624	3	69,196,2817,	0,359,4291,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	72144183	72161750	chrX:72144183-72161750	0	+	72144183	72144183	8553170	2	355,1914,	0,15653,
#Partially deleted in new
chrX	72159844	72160346	chrX:72159844-72160346	7	+	72159844	72159844	16724991	1	502,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	72181352	72197101	chrX:72181352-72197101	0	+	72181710	72186436	789624	3	476,301,317,	0,4881,15432,
#Partially deleted in new
chrX	72181675	72198337	chrX:72181675-72198337	1	+	72181710	72196928	789624	3	153,74,1553,	0,4785,15109,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	72181675	72263964	chrX:72181675-72263964	1	+	72181710	72262796	789624	4	153,74,120,1258,	0,4785,15109,81031,
#Partially deleted in new
chrX	72181678	72198344	chrX:72181678-72198344	3	+	72181710	72197526	789624	4	150,74,120,977,	0,4782,15106,15689,
#Partially deleted in new
chrX	72181764	72263126	chrX:72181764-72263126	0	+	72181764	72262796	789624	4	64,74,120,420,	0,4696,15020,80942,
#Partially deleted in new
chrX	72181793	72197354	chrX:72181793-72197354	0	+	72181793	72196928	789624	3	132,74,570,	0,4667,14991,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	72198711	72199050	chrX:72198711-72199050	3	+	72198711	72198711	8553170	1	339,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	72204656	72239027	chrX:72204656-72239027	1	-	72205013	72208397	789624	3	4042,118,184,	0,33174,34187,
#Partially deleted in new
chrX	72204659	72239047	chrX:72204659-72239047	3	-	72205013	72238911	0	2	4039,204,	0,34184,
#Partially deleted in new
chrX	72255678	72273371	chrX:72255678-72273371	0	-	72255678	72255678	8553170	3	376,94,140,	0,17000,17553,
#Partially deleted in new
chrX	72255783	72272723	chrX:72255783-72272723	0	-	72255783	72255783	8553170	2	271,84,	0,16856,
#Deleted in new
chrX	72272041	72277300	chrX:72272041-72277300	3	-	72272670	72277195	0	7	731,158,172,98,181,78,108,	0,1190,1759,3011,3502,4115,5151,
#Deleted in new
chrX	72272712	72276227	chrX:72272712-72276227	0	-	72272712	72272712	8553170	5	60,158,1350,181,71,	0,519,1088,2831,3444,
#Deleted in new
chrX	72274254	72277248	chrX:72274254-72277248	0	-	72274254	72274254	8553170	5	181,98,181,78,56,	0,798,1289,1902,2938,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	72284944	72285045	chrX:72284944-72285045	3	-	72284944	72284944	8553170	1	101,	0,
#Partially deleted in new
chrX	72301637	72307150	chrX:72301637-72307150	1	-	72301722	72305314	789624	5	607,125,121,19,126,	0,1172,3664,4839,5387,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	72301639	72305914	chrX:72301639-72305914	1	-	72301722	72305314	789624	4	605,125,121,90,	0,1170,3662,4185,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	72301639	72305914	chrX:72301639-72305914	1	-	72301722	72302869	789624	3	605,125,90,	0,1170,4185,
#Partially deleted in new
chrX	72301646	72307187	chrX:72301646-72307187	3	-	72301722	72302869	789624	3	598,125,163,	0,1163,5378,
#Deleted in new
chrX	72301647	72302868	chrX:72301647-72302868	0	-	72301722	72302868	789624	3	228,108,59,	0,489,1162,
#Partially deleted in new
chrX	72301649	72306987	chrX:72301649-72306987	1	-	72301722	72302869	789624	3	595,125,511,	0,1160,4827,
#Partially deleted in new
chrX	72301810	72572843	chrX:72301810-72572843	3	-	72301810	72572761	8553170	12	434,125,106,95,173,109,78,113,142,131,53,193,	0,999,49922,160193,162748,187122,189118,193345,266078,266943,270246,270840,
#Partially deleted in new
chrX	72301967	72305565	chrX:72301967-72305565	0	-	72301967	72305314	789624	3	277,125,264,	0,842,3334,
#Partially deleted in new
chrX	72302205	72306907	chrX:72302205-72306907	0	-	72302205	72305314	789624	4	39,125,121,431,	0,604,3096,4271,
#Partially deleted in new
chrX	72329515	72573199	chrX:72329515-72573199	1	-	72330053	72572761	0	11	561,106,95,173,109,78,113,142,131,53,549,	0,22217,132488,135043,159417,161413,165640,238373,239238,242541,243135,
#Partially deleted in new
chrX	72329515	72572877	chrX:72329515-72572877	1	-	72330053	72572761	789624	10	561,106,95,173,109,113,142,131,53,227,	0,22217,132488,135043,159417,165640,238373,239238,242541,243135,
#Partially deleted in new
chrX	72329518	72494380	chrX:72329518-72494380	0	-	72494349	72494380	8553170	7	558,106,99,173,109,78,185,	0,22214,132485,135040,159414,161410,164677,
#Partially deleted in new
chrX	72329537	72572865	chrX:72329537-72572865	1	-	72330053	72572761	8553170	12	539,111,106,95,173,109,78,113,142,131,53,215,	0,1120,22195,132466,135021,159395,161391,165618,238351,239216,242519,243113,
#Partially deleted in new
chrX	72329537	72572816	chrX:72329537-72572816	0	-	72349909	72572761	8553170	12	539,235,106,95,173,109,78,113,142,131,53,166,	0,20154,22195,132466,135021,159395,161391,165618,238351,239216,242519,243113,
#Partially deleted in new
chrX	72329556	72572859	chrX:72329556-72572859	1	-	72330053	72572761	8553170	12	520,78,106,95,173,109,78,113,142,131,53,209,	0,1134,22176,132447,135002,159376,161372,165599,238332,239197,242500,243094,
#Partially deleted in new
chrX	72329556	72572685	chrX:72329556-72572685	0	-	72329556	72329556	8553170	12	520,186,106,95,173,109,78,113,142,131,53,35,	0,1134,22176,132447,135002,159376,161372,165599,238332,239197,242500,243094,
#Partially deleted in new
chrX	72329558	72572843	chrX:72329558-72572843	1	-	72330053	72572761	8553170	10	518,78,106,95,173,109,78,113,53,193,	0,1132,22174,132445,135000,159374,161370,165597,242498,243092,
#Partially deleted in new
chrX	72329558	72568022	chrX:72329558-72568022	0	-	72330053	72568022	8553170	5	518,106,95,173,134,	0,22174,132445,135000,238330,
#Partially deleted in new
chrX	72329558	72572698	chrX:72329558-72572698	0	-	72462088	72572698	8553170	12	518,186,106,99,173,109,78,113,142,131,53,48,	0,1132,22174,132445,135000,159374,161370,165597,238330,239195,242498,243092,
#Partially deleted in new
chrX	72329558	72572787	chrX:72329558-72572787	0	-	72462088	72572761	8553170	11	518,106,99,173,109,78,113,142,131,53,137,	0,22174,132445,135000,159374,161370,165597,238330,239195,242498,243092,
#Partially deleted in new
chrX	72329559	72573101	chrX:72329559-72573101	1	-	72330053	72572761	0	9	517,106,95,173,109,78,113,53,451,	0,22173,132444,134999,159373,161369,165596,242497,243091,
#Partially deleted in new
chrX	72329567	72572865	chrX:72329567-72572865	3	-	72330865	72572761	8553170	12	509,61,106,95,173,109,78,113,142,131,53,215,	0,1248,22165,132436,134991,159365,161361,165588,238321,239186,242489,243083,
#Partially deleted in new
chrX	72329567	72572843	chrX:72329567-72572843	1	-	72330865	72572761	8553170	11	1309,106,95,173,109,78,113,142,131,53,193,	0,22165,132436,134991,159365,161361,165588,238321,239186,242489,243083,
#Partially deleted in new
chrX	72329567	72572847	chrX:72329567-72572847	1	-	72330053	72572761	8553170	11	509,106,95,173,109,72,113,142,131,53,197,	0,22165,132436,134991,159365,161361,165588,238321,239186,242489,243083,
#Partially deleted in new
chrX	72329567	72573081	chrX:72329567-72573081	1	-	72330053	72572761	8553170	6	509,106,95,173,53,431,	0,22165,132436,134991,242489,243083,
#Partially deleted in new
chrX	72329568	72349797	chrX:72329568-72349797	0	-	72329568	72329568	8553170	3	508,61,106,	0,1247,20123,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	72329573	72495179	chrX:72329573-72495179	0	-	72330053	72495179	8553170	6	503,106,151,109,78,24,	0,22159,55571,159359,161355,165582,
#Partially deleted in new
chrX	72329577	72572681	chrX:72329577-72572681	0	-	72494349	72572681	8553170	12	499,106,95,173,109,78,186,113,142,131,53,31,	0,22155,132426,134981,159355,161351,164618,165578,238311,239176,242479,243073,
#Partially deleted in new
chrX	72329617	72572781	chrX:72329617-72572781	0	-	72489031	72572761	8553170	10	459,106,95,173,109,78,142,131,53,131,	0,22115,132386,134941,159315,161311,238271,239136,242439,243033,
#Partially deleted in new
chrX	72329724	72572704	chrX:72329724-72572704	0	-	72572083	72572704	8553170	12	352,78,106,95,173,109,78,113,142,131,48,54,	0,966,22008,132279,134834,159208,161204,165431,238164,239029,242332,242926,
#Partially deleted in new
chrX	72329804	72572843	chrX:72329804-72572843	0	-	72491000	72572761	789624	10	272,106,95,173,109,78,113,131,53,193,	0,21928,132199,134754,159128,161124,165351,238949,242252,242846,
#Partially deleted in new
chrX	72329919	72464712	chrX:72329919-72464712	0	-	72330067	72464712	8553170	5	157,106,140,95,154,	0,21813,64039,132084,134639,
#Partially deleted in new
chrX	72330831	72464564	chrX:72330831-72464564	0	-	72462398	72464564	8553170	5	45,106,95,81,6,	0,20901,131172,131530,133727,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	72333655	72572848	chrX:72333655-72572848	0	-	72333655	72333655	8553170	11	2246,106,95,173,109,78,113,142,131,53,198,	0,18077,128348,130903,155277,157273,161500,234233,235098,238401,238995,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	72351143	72572816	chrX:72351143-72572816	0	-	72494349	72572761	8553170	11	695,95,173,109,78,186,113,142,131,53,166,	0,110860,113415,137789,139785,143052,144012,216745,217610,220913,221507,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	72351299	72572842	chrX:72351299-72572842	1	-	72351589	72572761	789624	10	539,95,173,109,78,113,142,131,53,192,	0,110704,113259,137633,139629,143856,216589,217454,220757,221351,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	72351378	72572816	chrX:72351378-72572816	1	-	72351589	72572761	8553170	7	460,95,173,142,131,53,166,	0,110625,113180,216510,217375,220678,221272,
#Partially deleted in new
chrX	72351420	72572818	chrX:72351420-72572818	0	-	72462088	72572761	8553170	10	418,99,173,109,78,113,142,131,53,168,	0,110583,113138,137512,139508,143735,216468,217333,220636,221230,
#Partially deleted in new
chrX	72351621	72572659	chrX:72351621-72572659	0	-	72462088	72572659	8553170	8	217,99,173,109,78,113,53,9,	0,110382,112937,137311,139307,143534,220435,221029,
#Partially deleted in new
chrX	72351790	72572858	chrX:72351790-72572858	0	-	72464723	72572761	789624	8	48,95,173,113,142,131,53,208,	0,110213,112768,143365,216098,216963,220266,220860,
#Partially deleted in new
chrX	72351791	72568791	chrX:72351791-72568791	0	-	72562635	72568791	8553170	9	47,95,173,109,78,111,34,142,38,	0,110212,112767,137141,139137,143364,210844,216097,216962,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	72376978	72377169	chrX:72376978-72377169	3	-	72376978	72376978	8553170	1	191,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	72385108	72572843	chrX:72385108-72572843	1	-	72385265	72572761	789624	10	187,95,173,109,78,113,142,131,53,193,	0,76895,79450,103824,105820,110047,182780,183645,186948,187542,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	72421654	72572847	chrX:72421654-72572847	0	-	72421654	72421654	8553170	10	821,92,173,109,78,113,142,131,53,197,	0,40349,42904,67278,69274,73501,146234,147099,150402,150996,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	72457401	72572843	chrX:72457401-72572843	1	-	72461955	72572761	8553170	9	4697,173,109,78,113,142,131,53,193,	0,7157,31531,33527,37754,110487,111352,114655,115249,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	72457405	72572856	chrX:72457405-72572856	1	-	72460451	72572761	8553170	10	3055,95,173,109,78,113,142,131,53,206,	0,4598,7153,31527,33523,37750,110483,111348,114651,115245,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	72457415	72572843	chrX:72457415-72572843	0	-	72495262	72572761	8553170	9	4683,173,109,78,111,142,131,53,193,	0,7143,31517,33513,37740,110473,111338,114641,115235,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	72457620	72572843	chrX:72457620-72572843	1	-	72461955	72572761	8553170	7	4478,173,109,78,113,53,193,	0,6938,31312,33308,37535,114436,115030,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	72460154	72572816	chrX:72460154-72572816	0	-	72460154	72460154	8553170	8	4577,109,78,113,142,131,53,166,	0,28778,30774,35001,107734,108599,111902,112496,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	72460258	72572816	chrX:72460258-72572816	0	-	72494349	72572761	8553170	11	1840,81,173,109,78,186,113,142,131,53,166,	0,2103,4300,28674,30670,33937,34897,107630,108495,111798,112392,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	72460341	72572866	chrX:72460341-72572866	0	-	72494349	72572761	8553170	10	1757,173,109,78,186,113,142,131,53,216,	0,4217,28591,30587,33854,34814,107547,108412,111715,112309,
#Partially deleted in new
chrX	72464028	72572817	chrX:72464028-72572817	0	-	72464028	72464028	8553170	6	703,109,78,113,53,167,	0,24904,26900,31127,108028,108622,
#Partially deleted in new
chrX	72464667	72572778	chrX:72464667-72572778	0	-	72568023	72572761	789624	7	64,109,78,113,142,53,128,	0,24265,26261,30488,103221,107389,107983,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	72466695	72572843	chrX:72466695-72572843	1	-	72467986	72572761	789624	8	1316,109,78,113,142,131,53,193,	0,22237,24233,28460,101193,102058,105361,105955,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	72473415	72573083	chrX:72473415-72573083	1	-	72474695	72572761	0	8	1314,109,78,113,142,131,53,433,	0,15517,17513,21740,94473,95338,98641,99235,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	72473415	72572821	chrX:72473415-72572821	1	-	72474658	72572761	8553170	6	1314,113,142,131,53,171,	0,21740,94473,95338,98641,99235,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	72473416	72475729	chrX:72473416-72475729	0	-	72473416	72473416	8553170	1	2313,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	72473430	72572810	chrX:72473430-72572810	1	-	72474695	72572761	8553170	8	1299,109,72,113,142,131,53,160,	0,15502,17498,21725,94458,95323,98626,99220,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	72473430	72572847	chrX:72473430-72572847	1	-	72474695	72572761	8553170	7	1299,109,113,142,131,53,197,	0,15502,21725,94458,95323,98626,99220,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	72473440	72572095	chrX:72473440-72572095	0	-	72568023	72572095	8553170	6	1289,109,78,113,142,39,	0,15492,17488,21715,94448,98616,
#Partially deleted in new
chrX	72474406	72572830	chrX:72474406-72572830	1	-	72474695	72572761	789624	5	323,142,131,53,180,	0,93482,94347,97650,98244,
#Partially deleted in new
chrX	72474534	72572812	chrX:72474534-72572812	1	-	72474695	72572761	0	5	195,109,113,53,162,	0,14398,20621,97522,98116,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	72484850	72572816	chrX:72484850-72572816	0	-	72494349	72572761	8553170	8	4191,78,186,113,142,131,53,166,	0,6078,9345,10305,83038,83903,87206,87800,
#Partially deleted in new
chrX	72495158	72572809	chrX:72495158-72572809	0	-	72495158	72572061	789624	5	110,142,131,53,116,	0,72730,73595,76898,77535,
#Partially deleted in new
chrX	72495193	72572627	chrX:72495193-72572627	0	-	72495193	72495193	8553170	5	75,142,131,53,191,	0,72695,73560,76863,77243,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	72562219	72572816	chrX:72562219-72572816	1	-	72562458	72572761	8553170	5	255,142,131,53,166,	0,5669,6534,9837,10431,
#Partially deleted in new
chrX	72567581	72572853	chrX:72567581-72572853	1	-	72567884	72572761	0	4	449,131,53,203,	0,1172,4475,5069,
#Partially deleted in new
chrX	72567581	72572856	chrX:72567581-72572856	1	-	72567756	72572761	0	5	215,142,131,53,206,	0,307,1172,4475,5069,
#Partially deleted in new
chrX	72568754	72573079	chrX:72568754-72573079	0	-	72568754	72568754	8553170	3	125,53,429,	0,3302,3896,
#Deleted in new
chrX	72571945	72572816	chrX:72571945-72572816	0	-	72571945	72571945	8553170	2	164,166,	0,705,
#Partially deleted in new
chrX	72578813	72714040	chrX:72578813-72714040	3	-	72581001	72713880	789624	32	2362,201,54,171,39,116,102,130,79,80,157,140,92,177,167,79,145,110,135,79,108,96,123,54,147,99,81,83,169,48,159,238,	0,3584,5435,14290,23177,23344,24305,26457,26727,30810,32214,39896,40400,41911,44295,48157,56341,57463,65548,71576,73730,74621,77306,78774,87337,88561,97256,105684,116894,126384,133965,134989,
#Partially deleted in new
chrX	72578813	72714319	chrX:72578813-72714319	1	-	72581001	72713880	789624	32	2362,201,54,171,51,39,116,102,130,79,80,157,140,92,167,79,145,110,135,79,108,96,123,54,147,99,81,83,169,48,159,517,	0,3584,5435,14290,21002,23177,23344,24305,26457,26727,30810,32214,39896,40400,44295,48157,56341,57463,65548,71576,73730,74621,77306,78774,87337,88561,97256,105684,116894,126384,133965,134989,
#Partially deleted in new
chrX	72578814	72714181	chrX:72578814-72714181	1	-	72581001	72713880	789624	31	2361,201,54,171,116,102,130,79,80,157,140,92,177,167,79,145,110,135,79,108,96,123,54,147,99,81,83,169,48,159,379,	0,3583,5434,14289,23343,24304,26456,26726,30809,32213,39895,40399,41910,44294,48156,56340,57462,65547,71575,73729,74620,77305,78773,87336,88560,97255,105683,116893,126383,133964,134988,
#Partially deleted in new
chrX	72578814	72714181	chrX:72578814-72714181	1	-	72581001	72713880	789624	30	2361,201,54,171,116,102,130,79,80,157,140,92,167,79,145,110,135,79,108,96,123,54,147,99,81,83,169,48,159,379,	0,3583,5434,14289,23343,24304,26456,26726,30809,32213,39895,40399,44294,48156,56340,57462,65547,71575,73729,74620,77305,78773,87336,88560,97255,105683,116893,126383,133964,134988,
#Partially deleted in new
chrX	72580626	72714258	chrX:72580626-72714258	1	-	72581001	72713880	789624	33	549,201,54,171,51,39,116,102,130,79,80,157,140,92,177,167,79,145,110,135,79,108,96,123,54,147,99,81,83,169,48,159,456,	0,1771,3622,12477,19189,21364,21531,22492,24644,24914,28997,30401,38083,38587,40098,42482,46344,54528,55650,63735,69763,71917,72808,75493,76961,85524,86748,95443,103871,115081,124571,132152,133176,
#Deleted in new
chrX	72660469	72660719	chrX:72660469-72660719	7	+	72660469	72660469	16724991	1	250,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	72688949	72712348	chrX:72688949-72712348	3	+	72688949	72688949	789624	5	53,40,68,45,392,	0,8209,18899,20481,23007,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	72726121	72726337	chrX:72726121-72726337	3	-	72726121	72726121	8553170	1	216,	0,
#Partially deleted in new
chrX	72727976	72728821	chrX:72727976-72728821	7	-	72727976	72727976	16724991	1	845,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	72740705	72740869	chrX:72740705-72740869	3	-	72740705	72740705	8553170	1	164,	0,
#Partially deleted in new
chrX	72777008	72848802	chrX:72777008-72848802	0	+	72845135	72846960	789624	6	240,158,59,134,393,540,	0,68033,68490,68863,69876,71254,
#Partially deleted in new
chrX	72777147	72848798	chrX:72777147-72848798	3	+	72845135	72848375	789624	7	101,158,59,134,61,148,536,	0,67894,68351,68724,69737,69982,71115,
#Partially deleted in new
chrX	72777607	72779097	chrX:72777607-72779097	3	+	72777607	72777607	789624	1	1490,	0,
#Partially deleted in new
chrX	72781864	72782660	chrX:72781864-72782660	3	-	72781989	72782560	789624	3	153,176,136,	0,307,660,
#Partially deleted in new
chrX	72807424	72808180	chrX:72807424-72808180	3	-	72807547	72808110	789624	3	151,176,106,	0,305,650,
#Partially deleted in new
chrX	72807424	72808210	chrX:72807424-72808210	1	-	72807547	72808110	789624	3	151,164,136,	0,305,650,
#Partially deleted in new
chrX	72842782	72846929	chrX:72842782-72846929	0	+	72845135	72846929	789624	5	62,158,59,134,45,	0,2259,2716,3089,4102,
#Partially deleted in new
chrX	72842967	72848798	chrX:72842967-72848798	1	+	72845135	72848375	789624	5	141,158,59,148,536,	0,2074,2531,4162,5295,
#Partially deleted in new
chrX	72844855	72845940	chrX:72844855-72845940	0	+	72845135	72845940	789624	3	344,59,69,	0,643,1016,
#Partially deleted in new
chrX	72845041	72848802	chrX:72845041-72848802	1	+	72845135	72848375	789624	6	158,59,134,61,148,540,	0,457,830,1843,2088,3221,
#Partially deleted in new
chrX	72845138	72848473	chrX:72845138-72848473	0	+	72845138	72847211	789624	5	61,59,134,148,211,	0,360,733,1991,3124,
#Partially deleted in new
chrX	72872024	72943814	chrX:72872024-72943814	0	-	72873866	72875694	789624	6	540,393,134,59,158,240,	0,1525,2800,3248,3606,71550,
#Partially deleted in new
chrX	72872028	72877864	chrX:72872028-72877864	1	-	72872451	72875694	789624	5	536,148,59,158,143,	0,1521,3244,3602,5693,
#Partially deleted in new
chrX	72872120	72875974	chrX:72872120-72875974	3	-	72872451	72875694	789624	6	444,148,61,134,59,344,	0,1429,1761,2704,3152,3510,
#Partially deleted in new
chrX	72873599	72943675	chrX:72873599-72943675	0	-	72873599	72875694	789624	6	98,61,134,59,158,101,	0,282,1225,1673,2031,69975,
#Partially deleted in new
chrX	72912614	72913401	chrX:72912614-72913401	3	+	72912714	72913278	789624	3	136,176,151,	0,305,636,
#Partially deleted in new
chrX	72912614	72913401	chrX:72912614-72913401	1	+	72912714	72913278	789624	3	136,164,151,	0,317,636,
#Partially deleted in new
chrX	72938162	72938958	chrX:72938162-72938958	1	+	72938262	72938833	789624	3	136,164,153,	0,325,643,
#Partially deleted in new
chrX	72938206	72938940	chrX:72938206-72938940	3	+	72938262	72938833	789624	3	92,176,135,	0,269,599,
#Deleted in new
chrX	72998387	73002856	chrX:72998387-73002856	3	-	72998387	72998387	789624	4	463,115,137,452,	0,2823,3799,4017,
#Deleted in new
chrX	73003516	73005713	chrX:73003516-73005713	3	+	73003642	73004245	789624	1	2197,	0,
#Deleted in new
chrX	73077275	73079512	chrX:73077275-73079512	3	-	73078783	73079386	789624	1	2237,	0,
#Deleted in new
chrX	73080166	73084635	chrX:73080166-73084635	3	+	73080166	73080166	8553170	4	452,137,115,463,	0,533,1531,4006,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	73126036	73128080	chrX:73126036-73128080	5	-	73126036	73126036	16724991	1	2044,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	73126513	73127735	chrX:73126513-73127735	7	-	73126513	73126513	16724991	1	1222,	0,
#Partially deleted in new
chrX	73212298	73214848	chrX:73212298-73214848	3	-	73213109	73214492	789624	1	2550,	0,
#Partially deleted in new
chrX	73223123	73223558	chrX:73223123-73223558	7	+	73223123	73223123	16724991	1	435,	0,
#Partially deleted in new
chrX	73237646	73238709	chrX:73237646-73238709	7	-	73237646	73237646	16724991	1	1063,	0,
#Partially deleted in new
chrX	73274784	73275515	chrX:73274784-73275515	7	+	73274784	73274784	16724991	1	731,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	73397530	73397637	chrX:73397530-73397637	3	-	73397530	73397530	8553170	1	107,	0,
#Partially deleted in new
chrX	73447253	73455245	chrX:73447253-73455245	3	+	73447253	73454585	789624	3	502,146,867,	0,6263,7125,
#Partially deleted in new
chrX	73474562	73474830	chrX:73474562-73474830	7	+	73474562	73474562	16724991	1	268,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	73524274	73563085	chrX:73524274-73563085	7	-	73524274	73524274	16724991	2	2413,126,	0,38685,
#Partially deleted in new
chrX	73524960	73526155	chrX:73524960-73526155	5	-	73524960	73524960	16724991	1	1195,	0,
#Partially deleted in new
chrX	73535502	73536241	chrX:73535502-73536241	7	+	73535502	73535502	16724991	1	739,	0,
#Partially deleted in new
chrX	73563199	73687102	chrX:73563199-73687102	1	+	73563284	73681005	789624	5	381,55,156,57,6148,	0,14207,21217,116126,117755,
#Partially deleted in new
chrX	73563207	73684411	chrX:73563207-73684411	3	+	73563284	73681005	789624	6	373,55,156,57,60,3457,	0,14199,21209,116118,116446,117747,
#Partially deleted in new
chrX	73563281	73686773	chrX:73563281-73686773	0	+	73563305	73681005	789624	7	299,55,156,57,60,162,178,	0,14125,21135,116044,116372,117673,123314,
#Partially deleted in new
chrX	73563451	73683215	chrX:73563451-73683215	0	+	73563451	73578712	789624	7	129,55,82,156,57,60,2261,	0,13955,15252,20965,115874,116202,117503,
#Partially deleted in new
chrX	73769247	73770423	chrX:73769247-73770423	7	+	73769247	73769247	16724991	1	1176,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	73792204	73829231	chrX:73792204-73829231	3	+	73792204	73792204	789624	1	37027,	0,
#Partially deleted in new
chrX	73820650	73851091	chrX:73820650-73851091	0	-	73820650	73820650	8553170	6	379,1814,164,209,137,162,	0,5464,8417,10415,12587,30279,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	73820650	73851592	chrX:73820650-73851592	1	-	73820650	73820650	8553170	8	379,146,1870,164,209,137,64,10211,	0,1420,5464,8417,10415,12587,16789,20731,
#Partially deleted in new
chrX	73820652	73826889	chrX:73820652-73826889	1	-	73820652	73820652	8553170	4	377,146,233,152,	0,1418,5462,6085,
#Partially deleted in new
chrX	73820652	73829127	chrX:73820652-73829127	0	-	73820652	73820652	8553170	3	377,1247,60,	0,6085,8415,
#Partially deleted in new
chrX	73820655	73826301	chrX:73820655-73826301	1	-	73820655	73820655	8553170	3	374,163,187,	0,1415,5459,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	73820655	73852723	chrX:73820655-73852723	1	-	73820655	73820655	789624	6	7329,164,209,137,64,11342,	0,8412,10410,12582,16784,20726,
#Partially deleted in new
chrX	73820655	73830641	chrX:73820655-73830641	0	-	73820655	73820655	8553170	5	374,146,1870,164,19,	0,1415,5459,8412,9967,
#Partially deleted in new
chrX	73820671	73838873	chrX:73820671-73838873	0	-	73820671	73820671	8553170	7	358,146,1870,164,209,137,1434,	0,1399,5443,8396,10394,12566,16768,
#Partially deleted in new
chrX	73820676	73841474	chrX:73820676-73841474	1	-	73820676	73820676	8553170	6	353,1247,164,209,137,4035,	0,6061,8391,10389,12561,16763,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	73820683	73846270	chrX:73820683-73846270	0	-	73820683	73820683	8553170	5	7301,164,137,64,4889,	0,8384,12554,16756,20698,
#Partially deleted in new
chrX	73820702	73844208	chrX:73820702-73844208	0	-	73820702	73820702	8553170	6	327,1870,164,209,64,2827,	0,5412,8365,10363,16737,20679,
#Partially deleted in new
chrX	73820716	73842684	chrX:73820716-73842684	1	-	73820716	73820716	8553170	7	313,150,1870,164,209,64,1303,	0,1350,5398,8351,10349,16723,20665,
#Partially deleted in new
chrX	73820766	73847000	chrX:73820766-73847000	0	-	73820766	73820766	8553170	7	263,1870,164,141,137,64,5619,	0,5348,8301,10299,12471,16673,20615,
#Partially deleted in new
chrX	73820891	73851867	chrX:73820891-73851867	3	-	73820891	73820891	8553170	8	138,1870,164,141,137,64,92,1366,	0,5223,8176,10174,12346,16548,20490,29610,
#Partially deleted in new
chrX	73821656	73821724	chrX:73821656-73821724	3	-	73821656	73821656	8553170	1	68,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	73821680	73851715	chrX:73821680-73851715	0	-	73821680	73821680	8553170	7	6304,164,209,137,64,92,1214,	0,7387,9385,11557,15759,19701,28821,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	73823336	73829691	chrX:73823336-73829691	0	-	73823336	73823336	8553170	2	4648,624,	0,5731,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	73823350	73844083	chrX:73823350-73844083	0	-	73823350	73823350	8553170	5	4578,164,209,64,2702,	0,5717,7715,14089,18031,
#Partially deleted in new
chrX	73824623	73830651	chrX:73824623-73830651	1	-	73824623	73824623	8553170	4	159,1814,164,29,	0,1491,4444,5999,
#Partially deleted in new
chrX	73825945	73831210	chrX:73825945-73831210	1	-	73825945	73825945	8553170	4	1983,164,168,145,	0,3122,4677,5120,
#Partially deleted in new
chrX	73826977	73850624	chrX:73826977-73850624	1	-	73826977	73826977	8553170	7	1007,164,209,137,64,30,123,	0,2090,4088,6260,10462,14314,23524,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	73827184	73832226	chrX:73827184-73832226	0	-	73827184	73827184	8553170	3	744,164,1161,	0,1883,3881,
#Partially deleted in new
chrX	73827600	73829470	chrX:73827600-73829470	0	-	73827600	73827600	8553170	3	384,164,35,	0,1467,1835,
#Partially deleted in new
chrX	73827746	73831397	chrX:73827746-73831397	0	-	73827746	73827746	8553170	4	182,164,209,28,	0,1321,3319,3623,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	73827887	73833046	chrX:73827887-73833046	0	-	73827887	73827887	8553170	4	41,164,209,169,	0,1180,3178,4990,
#Partially deleted in new
chrX	73829137	73833761	chrX:73829137-73833761	0	-	73829137	73829137	8553170	3	94,209,524,	0,1928,4100,
#Partially deleted in new
chrX	73831117	73841639	chrX:73831117-73841639	0	-	73831117	73831117	8553170	4	157,137,64,348,	0,2120,6322,10174,
#Partially deleted in new
chrX	73831144	73831270	chrX:73831144-73831270	3	-	73831144	73831144	8553170	1	126,	0,
#Partially deleted in new
chrX	73850486	73850571	chrX:73850486-73850571	3	+	73850486	73850486	8553170	1	85,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	73875067	73875635	chrX:73875067-73875635	7	+	73875067	73875067	16724991	2	150,135,	0,433,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	73944183	74012945	chrX:73944183-74012945	1	+	73944183	73944183	8553170	6	282,79,77,1142,5679,2399,	0,400,54584,55171,60086,66363,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	73944323	74004551	chrX:73944323-74004551	0	+	73944323	73944323	8553170	4	142,79,122,282,	0,260,50516,59946,
#Duplicated in new
chrX	73944323	73999114	chrX:73944323-73999114	0	+	73944323	73944323	8553170	5	142,79,122,77,161,	0,260,50516,54444,54630,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	73944327	74070408	chrX:73944327-74070408	1	+	73944327	73944327	789624	5	138,79,122,113,1240,	0,256,50512,117708,124841,
#Partially deleted in new
chrX	73944331	73944466	chrX:73944331-73944466	3	+	73944331	73944331	8553170	1	135,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	73944341	74000491	chrX:73944341-74000491	1	+	73944341	73944341	8553170	5	124,79,376,77,1538,	0,242,2657,54426,54612,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	73944342	73999503	chrX:73944342-73999503	0	+	73944342	73944342	8553170	4	123,79,77,550,	0,241,54425,54611,
#Partially deleted in new
chrX	73944345	73944946	chrX:73944345-73944946	0	+	73944345	73944345	8553170	2	120,363,	0,238,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	73944345	73999368	chrX:73944345-73999368	0	+	73944345	73944345	8553170	5	69,79,122,77,415,	0,238,50494,54422,54608,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	73944350	74004551	chrX:73944350-74004551	2	+	73944350	73944350	8553170	3	115,79,282,	0,233,59919,
#Partially deleted in new
chrX	73944594	73944663	chrX:73944594-73944663	3	+	73944594	73944594	8553170	1	69,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	73946554	74012945	chrX:73946554-74012945	1	-	73946554	73946554	8553170	4	1713,1584,6573,2397,	0,52602,56822,63994,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	73958058	73969485	chrX:73958058-73969485	3	-	73958058	73958058	8553170	2	104,243,	0,11184,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	73963954	74292342	chrX:73963954-74292342	0	-	73963954	73963954	8553170	6	588,69,101,155,147,17,	0,310387,316439,316976,317747,328371,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	73981895	74012945	chrX:73981895-74012945	0	-	73981895	73981895	8553170	4	710,1566,6573,2397,	0,17279,21481,28653,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	73998241	74292583	chrX:73998241-74292583	1	-	73998241	73998241	8553170	7	2499,6643,69,101,155,147,157,	0,5135,276100,282152,282689,283460,294185,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	73998241	74012945	chrX:73998241-74012945	0	-	73998241	73998241	8553170	3	2499,6573,2397,	0,5135,12307,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	74009388	74011468	chrX:74009388-74011468	0	-	74009388	74009388	8553170	2	530,375,	0,1705,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	74028135	74293574	chrX:74028135-74293574	0	-	74028135	74028135	789624	7	1416,245,69,101,155,147,223,	0,3460,246206,252258,252795,253566,265216,
#Partially deleted in new
chrX	74031461	74031820	chrX:74031461-74031820	7	+	74031461	74031461	16724991	1	359,	0,
#Partially deleted in new
chrX	74066082	74066592	chrX:74066082-74066592	7	+	74066082	74066082	16724991	1	510,	0,
#Partially deleted in new
chrX	74069275	74070832	chrX:74069275-74070832	7	+	74069275	74069275	16724991	2	782,400,	0,1157,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	74069357	74293472	chrX:74069357-74293472	0	-	74069357	74069357	8553170	5	227,101,155,147,121,	0,211036,211573,212344,223994,
#Partially deleted in new
chrX	74105571	74107958	chrX:74105571-74107958	7	+	74105571	74105571	16724991	1	2387,	0,
#Partially deleted in new
chrX	74121011	74131923	chrX:74121011-74131923	7	+	74121011	74121011	16724991	2	588,1362,	0,9550,
#Duplicated in new
chrX	74122133	74122725	chrX:74122133-74122725	3	-	74122133	74122133	8553170	1	592,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	74130308	74292594	chrX:74130308-74292594	1	-	74130308	74130308	8553170	8	420,105,69,101,155,147,202,168,	0,534,144033,150085,150622,151393,154434,162118,
#Partially deleted in new
chrX	74133003	74133114	chrX:74133003-74133114	7	-	74133003	74133003	16724991	1	111,	0,
#Deleted in new
chrX	74161061	74162528	chrX:74161061-74162528	7	-	74161061	74161061	16724991	1	1467,	0,
#Deleted in new
chrX	74173889	74174066	chrX:74173889-74174066	7	+	74173889	74173889	16724991	1	177,	0,
#Deleted in new
chrX	74185928	74187153	chrX:74185928-74187153	7	+	74185928	74185928	16724991	1	1225,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	74196350	74293574	chrX:74196350-74293574	1	-	74196350	74196350	8553170	7	7559,93,69,101,155,147,223,	0,50981,77991,84043,84580,85351,97001,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	74200228	74242148	chrX:74200228-74242148	2	-	74200228	74200228	8553170	2	3681,216,	0,41704,
#Deleted in new
chrX	74202833	74204595	chrX:74202833-74204595	7	+	74202833	74202833	16724991	1	1762,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	74209975	74213660	chrX:74209975-74213660	3	-	74209975	74209975	8553170	1	3685,	0,
#Deleted in new
chrX	74218376	74218461	chrX:74218376-74218461	3	-	74218376	74218376	5263520	1	85,	0,
#Deleted in new
chrX	74218546	74218618	chrX:74218546-74218618	3	-	74218546	74218546	5263520	1	72,	0,
#Deleted in new
chrX	74218548	74218618	chrX:74218548-74218618	3	+	74218548	74218548	5263520	1	70,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	74242607	74242908	chrX:74242607-74242908	3	-	74242607	74242607	8553170	1	301,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	74247863	74293527	chrX:74247863-74293527	0	-	74247863	74247863	8553170	6	60,69,101,155,147,176,	0,26478,32530,33067,33838,45488,
#Deleted in new
chrX	74274340	74274411	chrX:74274340-74274411	3	+	74274340	74274340	8553170	1	71,	0,
#Partially deleted in new
chrX	74274341	74292595	chrX:74274341-74292595	0	-	74274341	74274341	8553170	5	69,118,71,147,169,	0,6035,6589,7360,18085,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	74274355	74292529	chrX:74274355-74292529	0	-	74274355	74274355	8553170	5	55,101,155,147,103,	0,6038,6575,7346,18071,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	74278373	74292600	chrX:74278373-74292600	0	-	74278373	74278373	8553170	4	2121,155,147,174,	0,2557,3328,14053,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	74280400	74292351	chrX:74280400-74292351	0	-	74280400	74280400	8553170	4	94,155,147,183,	0,530,1301,11768,
#Partially deleted in new
chrX	74280401	74280495	chrX:74280401-74280495	3	+	74280401	74280401	8553170	1	94,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	74280460	74292075	chrX:74280460-74292075	0	-	74280460	74280460	8553170	4	34,155,147,318,	0,470,1241,11297,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	74280930	74293539	chrX:74280930-74293539	0	-	74280930	74280930	8553170	4	155,147,206,188,	0,771,3812,12421,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	74280935	74281082	chrX:74280935-74281082	3	+	74280935	74280935	8553170	1	147,	0,
#Partially deleted in new
chrX	74281702	74281849	chrX:74281702-74281849	3	+	74281702	74281702	8553170	1	147,	0,
#Deleted in new
chrX	74287103	74287209	chrX:74287103-74287209	3	-	74287103	74287103	5263520	1	106,	0,
#Deleted in new
chrX	74287285	74287357	chrX:74287285-74287357	3	-	74287285	74287285	5263520	1	72,	0,
#Deleted in new
chrX	74293356	74293574	chrX:74293356-74293574	3	+	74293356	74293356	8553170	1	218,	0,
#Deleted in new
chrX	74304189	74305031	chrX:74304189-74305031	3	+	74304266	74304767	789624	1	842,	0,
#Deleted in new
chrX	74342712	74342860	chrX:74342712-74342860	7	-	74342712	74342712	16724991	1	148,	0,
#Partially deleted in new
chrX	74376124	74376885	chrX:74376124-74376885	7	-	74376124	74376124	16724991	1	761,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	74390691	74390989	chrX:74390691-74390989	3	+	74390691	74390691	8553170	1	298,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	74396870	74399550	chrX:74396870-74399550	7	-	74396870	74396870	16724991	2	1211,992,	0,1688,
#Deleted in new
chrX	74409517	74410100	chrX:74409517-74410100	7	+	74409517	74409517	16724991	1	583,	0,
#Partially deleted in new
chrX	74421460	74533917	chrX:74421460-74533917	3	+	74421637	74531553	789624	6	607,145,451,144,229,2585,	0,99529,102898,104289,107752,109872,
#Partially deleted in new
chrX	74473016	74473953	chrX:74473016-74473953	7	-	74473016	74473016	16724991	1	937,	0,
#Partially deleted in new
chrX	74521119	74532608	chrX:74521119-74532608	0	+	74521119	74531410	789624	4	15,451,144,1276,	0,3239,4630,10213,
#Deleted in new
chrX	74583087	74583546	chrX:74583087-74583546	7	-	74583087	74583087	16724991	1	459,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	74585216	74614617	chrX:74585216-74614617	3	-	74591439	74595977	789624	4	7845,84,192,196,	0,9089,10592,29205,
#Partially deleted in new
chrX	74590117	74614617	chrX:74590117-74614617	1	-	74591439	74595977	789624	5	2944,84,192,62,196,	0,4188,5691,22464,24304,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	74680052	74680159	chrX:74680052-74680159	3	+	74680052	74680052	8553170	1	107,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	74732855	74925447	chrX:74732855-74925447	3	-	74739404	74745650	789624	4	6643,4378,126,565,	0,7244,12716,192027,
#Partially deleted in new
chrX	74733576	74925485	chrX:74733576-74925485	1	-	74739404	74745650	789624	5	5922,4378,126,142,56,	0,6523,11995,191306,191853,
#Deleted in new
chrX	74737093	74740360	chrX:74737093-74740360	0	-	74739404	74740360	789624	3	141,130,261,	0,2275,3006,
#Partially deleted in new
chrX	74739980	74925472	chrX:74739980-74925472	1	-	74740095	74745650	789624	3	4497,126,590,	0,5591,184902,
#Deleted in new
chrX	74769638	74769798	chrX:74769638-74769798	7	+	74769638	74769638	16724991	1	160,	0,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chrX	75051553	75156340	chrX:75051553-75156340	3	-	75053369	75156272	789624	16	2032,108,104,172,130,164,158,175,88,89,269,133,120,87,81,236,	0,8669,10774,13516,17453,17737,18811,19955,22135,22314,23808,24968,47388,61332,63200,104551,
#Partially deleted in new
chrX	75053279	75156282	chrX:75053279-75156282	1	-	75053369	75156272	789624	16	306,108,104,172,130,164,158,175,88,89,269,133,120,87,81,178,	0,6943,9048,11790,15727,16011,17085,18229,20409,20588,22082,23242,45662,59606,61474,102825,
#Partially deleted in new
chrX	75053279	75156286	chrX:75053279-75156286	1	-	75060250	75156272	789624	16	306,46,104,172,130,164,158,175,88,89,269,133,120,87,81,182,	0,6943,9048,11790,15727,16011,17085,18229,20409,20588,22082,23242,45662,59606,61474,102825,
#Partially deleted in new
chrX	75053281	75156279	chrX:75053281-75156279	1	-	75053369	75156272	789624	15	304,108,104,172,130,164,158,175,88,89,269,133,87,78,175,	0,6941,9046,11788,15725,16009,17083,18227,20407,20586,22080,23240,59604,61472,102823,
#Partially deleted in new
chrX	75053283	75156280	chrX:75053283-75156280	1	-	75053369	75156272	789624	16	302,108,104,172,130,164,158,175,88,89,269,133,120,87,78,176,	0,6939,9044,11786,15723,16007,17081,18225,20405,20584,22078,23238,45658,59602,61470,102821,
#Partially deleted in new
chrX	75053369	75156272	chrX:75053369-75156272	1	-	75053369	75156272	789624	15	216,108,104,172,130,164,158,175,88,89,269,133,87,81,168,	0,6853,8958,11700,15637,15921,16995,18139,20319,20498,21992,23152,59516,61384,102735,
#Partially deleted in new
chrX	75053444	75156282	chrX:75053444-75156282	0	-	75053444	75156272	789624	15	141,108,104,172,130,164,158,175,88,89,269,133,120,87,178,	0,6778,8883,11625,15562,15846,16920,18064,20244,20423,21917,23077,45497,59441,102660,
#Partially deleted in new
chrX	75053463	75062627	chrX:75053463-75062627	0	-	75053463	75053463	8553170	3	122,108,300,	0,6759,8864,
#Partially deleted in new
chrX	75065207	75073902	chrX:75065207-75073902	0	-	75071683	75073902	789624	7	34,130,164,158,196,88,35,	0,3799,4083,5157,6301,8481,8660,
#Partially deleted in new
chrX	75069055	75071581	chrX:75069055-75071581	0	-	75069055	75069055	8553170	3	399,158,73,	0,1309,2453,
#Partially deleted in new
chrX	75075485	75156286	chrX:75075485-75156286	0	-	75075485	75156272	789624	4	145,133,120,182,	0,1036,23456,80619,
#Partially deleted in new
chrX	75076631	75156732	chrX:75076631-75156732	0	-	75076631	75156697	789624	6	23,120,87,81,168,71,	0,22310,36254,38122,79473,80030,
#Partially deleted in new
chrX	75076639	75156282	chrX:75076639-75156282	0	-	75097523	75156282	789624	6	15,83,120,87,78,178,	0,20816,22302,36246,38114,79465,
#Partially deleted in new
chrX	75201490	75201790	chrX:75201490-75201790	7	+	75201490	75201490	16724991	1	300,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	75202702	75202809	chrX:75202702-75202809	3	+	75202702	75202702	8553170	1	107,	0,
#Partially deleted in new
chrX	75274084	75297791	chrX:75274084-75297791	0	+	75274084	75274084	8553170	4	556,43,70,301,	0,19387,22257,23406,
#Partially deleted in new
chrX	75274087	75304600	chrX:75274087-75304600	3	+	75274254	75303511	789624	7	553,43,70,63,162,99,1196,	0,19384,22254,23403,25647,26779,29317,
#Partially deleted in new
chrX	75274089	75304600	chrX:75274089-75304600	1	+	75274254	75300988	789624	7	551,43,70,63,162,149,1196,	0,19382,22252,23401,25645,26777,29315,
#Partially deleted in new
chrX	75274115	75303519	chrX:75274115-75303519	0	+	75274254	75296385	789624	8	525,43,58,70,63,162,99,115,	0,19356,20447,22226,23375,25619,26751,29289,
#Partially deleted in new
chrX	75274126	75293514	chrX:75274126-75293514	0	+	75274254	75291435	789624	3	514,168,43,	0,17266,19345,
#Partially deleted in new
chrX	75274727	75304572	chrX:75274727-75304572	1	+	75293493	75303511	789624	7	31,43,70,63,162,99,1168,	0,18744,21614,22763,25007,26139,28677,
#Partially deleted in new
chrX	75293471	75303922	chrX:75293471-75303922	0	+	75293471	75293471	8553170	5	43,63,162,99,518,	0,4019,6263,7395,9933,
#Partially deleted in new
chrX	75326771	75327999	chrX:75326771-75327999	7	-	75326771	75326771	16724991	1	1228,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	75368426	75523255	chrX:75368426-75523255	3	-	75379151	75523024	789624	12	4519,79,104,127,133,121,33,70,121,95,27,367,	0,10693,48660,53437,56225,60651,61521,63024,82375,110464,137394,154462,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	75368430	75523502	chrX:75368430-75523502	1	-	75379151	75523024	789624	11	4515,79,104,127,133,121,33,70,121,95,614,	0,10689,48656,53433,56221,60647,61517,63020,82371,110460,154458,
#Partially deleted in new
chrX	75384345	75384828	chrX:75384345-75384828	7	+	75384345	75384345	16724991	1	483,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	75501491	75523010	chrX:75501491-75523010	0	-	75501491	75501491	8553170	2	777,122,	0,21397,
#Partially deleted in new
chrX	75537546	75538702	chrX:75537546-75538702	7	-	75537546	75537546	16724991	2	233,284,	0,872,
#Partially deleted in new
chrX	75582675	75585506	chrX:75582675-75585506	7	+	75582675	75582675	16724991	2	115,2588,	0,243,
#Deleted in new
chrX	75740830	75746911	chrX:75740830-75746911	7	-	75740830	75740830	16724991	1	6081,	0,
#Deleted in new
chrX	75782987	75785236	chrX:75782987-75785236	3	-	75783479	75785051	789624	1	2249,	0,
#Partially deleted in new
chrX	75884545	75885136	chrX:75884545-75885136	7	+	75884545	75884545	16724991	1	591,	0,
#Partially deleted in new
chrX	75888699	75888888	chrX:75888699-75888888	7	+	75888699	75888699	16724991	1	189,	0,
#Partially deleted in new
chrX	76029894	76030330	chrX:76029894-76030330	7	+	76029894	76029894	16724991	1	436,	0,
#Partially deleted in new
chrX	76172935	76178204	chrX:76172935-76178204	3	+	76173138	76177908	789624	6	233,66,60,141,112,589,	0,649,1954,2537,3945,4680,
#Partially deleted in new
chrX	76173039	76178196	chrX:76173039-76178196	1	+	76173138	76178017	789624	5	129,66,60,141,581,	0,545,1850,2433,4576,
#Deleted in new
chrX	76222636	76223097	chrX:76222636-76223097	7	+	76222636	76222636	16724991	1	461,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	76244967	76245074	chrX:76244967-76245074	3	+	76244967	76244967	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	76250182	76251796	chrX:76250182-76251796	7	-	76250182	76250182	16724991	1	1614,	0,
#Partially deleted in new
chrX	76334840	76335845	chrX:76334840-76335845	7	-	76334840	76334840	16724991	1	1005,	0,
#Deleted in new
chrX	76427723	76431353	chrX:76427723-76431353	3	+	76427930	76430804	0	1	3630,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	76655008	76655127	chrX:76655008-76655127	7	-	76655008	76655008	16724991	1	119,	0,
#Partially deleted in new
chrX	76655497	76656559	chrX:76655497-76656559	7	-	76655497	76655497	16724991	1	1062,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	76657797	77014532	chrX:76657797-77014532	1	-	76657797	76657797	789624	4	511,121,105,306,	0,35169,349478,356429,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	76657939	77014284	chrX:76657939-77014284	0	-	76657939	76657939	8553170	3	369,110,58,	0,123243,356287,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	76657990	77014283	chrX:76657990-77014283	0	-	76657990	76657990	789624	4	318,121,83,57,	0,34976,179819,356236,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	76658118	77014500	chrX:76658118-77014500	0	-	76658118	76658118	789624	3	190,110,274,	0,123064,356108,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	76658119	77014468	chrX:76658119-77014468	1	-	76658119	76658119	789624	3	189,167,242,	0,382,356107,
#Partially deleted in new
chrX	76658125	77014502	chrX:76658125-77014502	2	-	76658125	76658125	789624	3	183,105,276,	0,349150,356101,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	76658593	77014532	chrX:76658593-77014532	0	-	76658593	76658593	8553170	2	272,306,	0,355633,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	76658795	77014502	chrX:76658795-77014502	0	-	76658795	76658795	8553170	4	70,121,105,276,	0,34171,348480,355431,
#Partially deleted in new
chrX	76717511	77014500	chrX:76717511-77014500	0	-	76717511	76717511	8553170	2	226,274,	0,296715,
#Partially deleted in new
chrX	76919272	76919360	chrX:76919272-76919360	3	-	76919272	76919272	5263520	1	88,	0,
#Partially deleted in new
chrX	77005403	77005501	chrX:77005403-77005501	3	-	77005403	77005403	5263520	1	98,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	77066708	77066827	chrX:77066708-77066827	7	+	77066708	77066708	16724991	1	119,	0,
#Partially deleted in new
chrX	77374211	77381319	chrX:77374211-77381319	7	+	77374211	77374211	16724991	2	252,318,	0,6790,
#Partially deleted in new
chrX	77447404	77457278	chrX:77447404-77457278	3	+	77447674	77456522	789624	3	544,104,1002,	0,6752,8872,
#Partially deleted in new
chrX	77504877	77786216	chrX:77504877-77786216	3	-	77508350	77786001	789624	35	3752,129,96,126,150,195,178,109,107,154,170,89,131,118,176,138,178,147,110,142,240,103,94,177,134,73,3074,68,110,114,128,53,56,113,235,	0,15910,16525,17385,18374,52573,53791,69372,84956,88818,94533,94854,95556,111735,113928,115517,128329,128688,129716,131037,147236,149220,151682,158504,159767,171348,176642,180061,183940,188946,191699,192705,193696,212253,281104,
#Partially deleted in new
chrX	77505712	77786216	chrX:77505712-77786216	1	-	77508350	77786001	789624	34	2917,129,96,126,150,195,178,109,107,154,170,89,131,118,176,138,178,147,110,142,240,103,94,177,134,73,3074,68,110,128,53,56,113,235,	0,15075,15690,16550,17539,51738,52956,68537,84121,87983,93698,94019,94721,110900,113093,114682,127494,127853,128881,130202,146401,148385,150847,157669,158932,170513,175807,179226,183105,190864,191870,192861,211418,280269,
#Partially deleted in new
chrX	77505712	77786216	chrX:77505712-77786216	0	-	77690914	77786001	789624	36	2917,129,96,126,150,195,178,109,107,154,170,89,131,118,176,138,178,147,110,142,240,103,94,177,134,73,3074,68,110,123,114,128,53,56,113,235,	0,15075,15690,16550,17539,51738,52956,68537,84121,87983,93698,94019,94721,110900,113093,114682,127494,127853,128881,130202,146401,148385,150847,157669,158932,170513,175807,179226,183105,185090,188111,190864,191870,192861,211418,280269,
#Partially deleted in new
chrX	77506904	77596875	chrX:77506904-77596875	0	-	77506904	77506904	8553170	8	1725,1601,150,195,178,109,107,3180,	0,13883,16347,50546,51764,67345,82929,86791,
#Partially deleted in new
chrX	77508480	77522468	chrX:77508480-77522468	0	-	77508480	77508480	8553170	4	149,129,96,206,	0,12307,12922,13782,
#Deleted in new
chrX	77521035	77521421	chrX:77521035-77521421	0	-	77521035	77521035	8553170	2	67,19,	0,367,
#Partially deleted in new
chrX	77558808	77561708	chrX:77558808-77561708	0	-	77558808	77558808	8553170	2	38,62,	0,2838,
#Partially deleted in new
chrX	77574256	77600540	chrX:77574256-77600540	0	-	77593762	77600540	789624	7	102,107,154,74,170,89,107,	0,15577,19439,21455,25154,25475,26177,
#Partially deleted in new
chrX	77574310	77575605	chrX:77574310-77575605	0	-	77574310	77574310	8553170	2	48,52,	0,1243,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	77575692	77589872	chrX:77575692-77589872	0	-	77575692	77575692	8553170	2	61,39,	0,14141,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	77599734	77600755	chrX:77599734-77600755	0	-	77599734	77599734	8553170	2	86,322,	0,699,
#Partially deleted in new
chrX	77616244	77633321	chrX:77616244-77633321	0	-	77616461	77633321	789624	5	267,118,176,138,115,	0,368,2561,4150,16962,
#Partially deleted in new
chrX	77620427	77633865	chrX:77620427-77633865	0	-	77620427	77620427	8553170	3	105,178,300,	0,12779,13138,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	77633352	77652276	chrX:77633352-77652276	0	-	77652077	77652276	789624	5	32,147,110,142,294,	0,213,1241,2562,18630,
#Partially deleted in new
chrX	77634421	77652150	chrX:77634421-77652150	0	-	77634421	77634421	8553170	3	282,142,37,	0,1493,17692,
#Partially deleted in new
chrX	77654157	77786220	chrX:77654157-77786220	0	-	77654157	77786001	789624	14	43,94,177,134,73,1932,1055,68,107,128,53,56,113,239,	0,2402,9224,10487,22068,27362,29381,30781,34660,42419,43425,44416,62973,131824,
#Partially deleted in new
chrX	77673953	77682141	chrX:77673953-77682141	0	-	77676038	77682141	789624	2	2345,622,	0,7566,
#Partially deleted in new
chrX	77682304	77786208	chrX:77682304-77786208	0	-	77682304	77786001	789624	10	1147,1055,68,110,114,128,53,56,113,227,	0,1234,2634,6513,11519,14272,15278,16269,34826,103677,
#Partially deleted in new
chrX	77683506	77786225	chrX:77683506-77786225	0	-	77683506	77698597	789624	8	1087,68,110,114,128,53,56,244,	0,1432,5311,10317,13070,14076,15067,102475,
#Partially deleted in new
chrX	77684477	77698580	chrX:77684477-77698580	0	-	77684477	77698580	789624	7	116,68,107,114,128,53,7,	0,461,4340,9346,12099,13105,14096,
#Partially deleted in new
chrX	77684997	77786208	chrX:77684997-77786208	0	-	77684997	77698597	789624	6	9,110,128,53,56,227,	0,3820,11579,12585,13576,100984,
#Partially deleted in new
chrX	77688901	77693833	chrX:77688901-77693833	0	-	77691280	77693833	8553170	3	23,67,10,	0,2323,4922,
#Partially deleted in new
chrX	77696687	77786233	chrX:77696687-77786233	0	-	77696687	77717146	789624	5	17,53,56,113,389,	0,895,1886,20443,89157,
#Partially deleted in new
chrX	77697602	77786204	chrX:77697602-77786204	0	-	77697602	77697602	8553170	5	33,56,38,113,223,	0,971,1907,19528,88379,
#Deleted in new
chrX	77727866	77728080	chrX:77727866-77728080	7	+	77727866	77727866	16724991	1	214,	0,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	77826363	77895593	chrX:77826363-77895593	3	-	77829219	77895506	789624	10	2872,91,75,64,90,141,141,118,170,285,	0,4441,14882,27537,29137,30369,30993,44444,49064,68945,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	77826366	77895568	chrX:77826366-77895568	1	-	77829219	77895506	789624	10	2869,91,75,64,90,141,141,118,170,260,	0,4438,14879,27534,29134,30366,30990,44441,49061,68942,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	77827460	77895431	chrX:77827460-77895431	1	-	77829219	77895410	789624	10	1775,91,75,64,90,141,141,118,170,123,	0,3344,13785,26440,28040,29272,29896,43347,47967,67848,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	77837288	77837395	chrX:77837288-77837395	3	+	77837288	77837288	8553170	1	107,	0,
#Partially deleted in new
chrX	77856459	77895424	chrX:77856459-77895424	0	-	77856459	77856459	8553170	5	414,141,118,170,116,	0,897,14348,18968,38849,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	77868107	77895440	chrX:77868107-77895440	1	-	77868634	77895410	789624	4	542,118,170,132,	0,2700,7320,27201,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	77885376	77885634	chrX:77885376-77885634	3	+	77885376	77885376	8553170	1	258,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	77899437	77907373	chrX:77899437-77907373	3	+	77899553	77905261	789624	3	156,125,2190,	0,3205,5746,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	77899439	77905385	chrX:77899439-77905385	1	+	77902662	77905261	8553170	4	154,124,125,202,	0,2304,3203,5744,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	77899462	77903196	chrX:77899462-77903196	1	+	77899553	77902785	8553170	2	131,554,	0,3180,
#Partially deleted in new
chrX	77899474	77905385	chrX:77899474-77905385	1	+	77899553	77905261	789624	3	119,125,202,	0,3168,5709,
#Partially deleted in new
chrX	77899484	77905461	chrX:77899484-77905461	1	+	77899553	77902729	8553170	3	109,118,278,	0,3165,5699,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chrX	77910655	78050389	chrX:77910655-78050389	1	+	77971641	78046570	789624	22	180,141,490,726,207,164,162,77,226,92,128,155,135,195,183,217,147,143,204,118,103,4096,	0,60965,77586,78577,87822,92417,98446,100520,100793,104006,105098,109588,110289,118594,120744,122949,128180,129935,131929,132661,134814,135638,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chrX	77910701	78050395	chrX:77910701-78050395	3	+	77971641	78046570	789624	23	134,141,490,726,207,164,162,77,226,234,92,128,155,135,195,183,217,147,143,204,118,103,4102,	0,60919,77540,78531,87776,92371,98400,100474,100747,102177,103960,105052,109542,110243,118548,120698,122903,128134,129889,131883,132615,134768,135592,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	77910737	77924693	chrX:77910737-77924693	0	+	77910737	77910737	8553170	2	98,1695,	0,12261,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	77910738	78126949	chrX:77910738-78126949	1	+	78109885	78125830	0	11	97,51,156,145,104,120,115,180,178,99,1160,	0,199128,203005,203277,206573,207312,212096,212456,214135,214588,215051,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	77910738	77975950	chrX:77910738-77975950	1	+	77971641	77974774	789624	6	97,44,192,141,64,440,	0,12260,51884,60882,64006,64772,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	77910739	77975726	chrX:77910739-77975726	1	+	77971641	77974774	789624	5	96,54,141,64,216,	0,12259,60881,64005,64771,
#Partially deleted in new
chrX	77910739	78042621	chrX:77910739-78042621	0	+	77971641	77974774	789624	21	96,141,64,490,726,207,164,162,77,226,234,92,128,155,135,195,183,217,147,143,37,	0,60881,64005,77502,78493,87738,92333,98362,100436,100709,102139,103922,105014,109504,110205,118510,120660,122865,128096,129851,131845,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	77910740	77964890	chrX:77910740-77964890	7	+	77910740	77910740	16724991	2	95,2268,	0,51882,
#Deleted in new
chrX	77962552	77962889	chrX:77962552-77962889	5	+	77962552	77962552	16724991	1	337,	0,
#Deleted in new
chrX	77968873	77969638	chrX:77968873-77969638	3	-	77968873	77969638	789624	1	765,	0,
#Partially deleted in new
chrX	78065215	78122903	chrX:78065215-78122903	0	+	78065215	78065215	8553170	7	57,51,156,145,104,120,69,	0,44651,48528,48800,52096,52835,57619,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	78104173	78129296	chrX:78104173-78129296	3	+	78104340	78125830	0	11	232,51,156,145,104,120,115,180,178,99,3507,	0,5693,9570,9842,13138,13877,18661,19021,20700,21153,21616,
#Deleted in new
chrX	78122838	78123338	chrX:78122838-78123338	0	+	78122838	78122838	8553170	2	163,144,	0,356,
#Deleted in new
chrX	78124943	78126267	chrX:78124943-78126267	0	+	78124943	78124943	8553170	2	482,478,	0,846,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	78129747	78139706	chrX:78129747-78139706	3	-	78131609	78139611	789624	7	2026,111,76,135,137,82,146,	0,3590,7167,8001,8214,9095,9813,
#Partially deleted in new
chrX	78131720	78139622	chrX:78131720-78139622	0	-	78131720	78131720	8553170	6	53,111,76,350,82,62,	0,1617,5194,6028,7122,7840,
#Partially deleted in new
chrX	78165695	78172422	chrX:78165695-78172422	7	-	78165695	78165695	16724991	11	156,63,96,96,72,147,81,174,123,48,99,	0,1463,2548,2773,3625,4304,4659,5549,5805,6043,6628,
#Partially deleted in new
chrX	78271463	78327483	chrX:78271463-78327483	1	-	78272732	78273746	789624	3	2310,87,179,	0,11990,55841,
#Partially deleted in new
chrX	78271479	78327691	chrX:78271479-78327691	3	-	78272732	78273746	789624	2	2294,387,	0,55825,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	78318896	78327551	chrX:78318896-78327551	0	-	78318896	78318896	8553170	2	2787,247,	0,8408,
#Partially deleted in new
chrX	78519592	78520186	chrX:78519592-78520186	7	-	78519592	78519592	16724991	2	191,99,	0,495,
#Partially deleted in new
chrX	78554411	78554751	chrX:78554411-78554751	7	-	78554411	78554411	16724991	1	340,	0,
#Partially deleted in new
chrX	78656068	78659328	chrX:78656068-78659328	3	-	78656992	78658420	789624	2	2580,68,	0,3192,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	78699383	78699891	chrX:78699383-78699891	7	-	78699383	78699383	16724991	1	508,	0,
#Partially deleted in new
chrX	78747708	78751294	chrX:78747708-78751294	0	+	78747708	78747708	8553170	5	326,268,50,63,85,	0,1254,2465,3021,3501,
#Partially deleted in new
chrX	78747708	78756404	chrX:78747708-78756404	1	+	78754869	78755982	789624	5	326,50,63,102,1614,	0,2465,3021,3501,7082,
#Partially deleted in new
chrX	78747727	78757094	chrX:78747727-78757094	3	+	78754869	78755982	789624	2	307,2304,	0,7063,
#Partially deleted in new
chrX	78747730	78755006	chrX:78747730-78755006	0	+	78754869	78755006	789624	4	304,50,102,216,	0,2443,3479,7060,
#Partially deleted in new
chrX	78747733	78754827	chrX:78747733-78754827	0	+	78747733	78747733	8553170	5	301,50,63,102,37,	0,2440,2996,3476,7057,
#Partially deleted in new
chrX	78763225	78763899	chrX:78763225-78763899	7	+	78763225	78763225	16724991	1	674,	0,
#Partially deleted in new
chrX	78901193	78901249	chrX:78901193-78901249	3	-	78901193	78901193	5263520	1	56,	0,
#Partially deleted in new
chrX	78945331	78961940	chrX:78945331-78961940	3	+	78960520	78961540	789624	2	164,1433,	0,15176,
#Partially deleted in new
chrX	78945420	78961954	chrX:78945420-78961954	1	+	78960520	78961540	789624	4	75,49,143,1447,	0,2394,6772,15087,
#Partially deleted in new
chrX	78945420	78960871	chrX:78945420-78960871	0	+	78945420	78945420	8553170	2	75,364,	0,15087,
#Partially deleted in new
chrX	78945420	78961080	chrX:78945420-78961080	0	+	78945420	78945420	8553170	3	75,143,573,	0,6772,15087,
#Partially deleted in new
chrX	79084935	79085848	chrX:79084935-79085848	7	+	79084935	79084935	16724991	1	913,	0,
#Partially deleted in new
chrX	79144662	79175315	chrX:79144662-79175315	3	+	79171007	79172009	789624	3	555,97,4864,	0,12159,25789,
#Partially deleted in new
chrX	79170971	79172229	chrX:79170971-79172229	1	+	79171007	79172009	789624	1	1258,	0,
#Partially deleted in new
chrX	79177199	79177668	chrX:79177199-79177668	7	-	79177199	79177199	16724991	1	469,	0,
#Partially deleted in new
chrX	79323445	79325217	chrX:79323445-79325217	7	+	79323445	79323445	16724991	3	417,748,114,	0,581,1658,
#Partially deleted in new
chrX	79360383	79367359	chrX:79360383-79367359	3	-	79361088	79367215	789624	6	794,151,111,198,132,255,	0,945,2197,2558,3039,6721,
#Partially deleted in new
chrX	79360387	79367552	chrX:79360387-79367552	1	-	79361088	79367215	789624	5	790,151,111,198,448,	0,941,2193,2554,6717,
#Partially deleted in new
chrX	79360961	79366927	chrX:79360961-79366927	0	-	79360961	79360961	8553170	6	216,151,111,198,132,71,	0,367,1619,1980,2461,5895,
#Deleted in new
chrX	79362580	79367318	chrX:79362580-79367318	0	-	79362580	79362580	8553170	3	111,198,214,	0,361,4524,
#Deleted in new
chrX	79363111	79363556	chrX:79363111-79363556	0	-	79363111	79363111	8553170	2	56,134,	0,311,
#Deleted in new
chrX	79367103	79367667	chrX:79367103-79367667	0	-	79367103	79367103	8553170	2	170,121,	0,443,
#Deleted in new
chrX	79369363	79370165	chrX:79369363-79370165	7	-	79369363	79369363	16724991	1	802,	0,
#Partially deleted in new
chrX	80014755	80031769	chrX:80014755-80031769	3	+	80022269	80031111	789624	9	132,177,181,102,175,165,65,86,1272,	0,7512,8304,9307,10847,11948,12500,13235,15742,
#Partially deleted in new
chrX	80014755	80031373	chrX:80014755-80031373	0	+	80022269	80024094	789624	9	132,177,177,102,175,165,65,86,876,	0,7512,8304,9307,10847,11948,12500,13235,15742,
#Partially deleted in new
chrX	80014768	80022654	chrX:80014768-80022654	0	+	80014768	80014768	8553170	2	119,387,	0,7499,
#Partially deleted in new
chrX	80022241	80031769	chrX:80022241-80031769	1	+	80022269	80031111	789624	8	203,181,102,175,165,65,86,1272,	0,818,1821,3361,4462,5014,5749,8256,
#Partially deleted in new
chrX	80023068	80031769	chrX:80023068-80031769	0	+	80023068	80023068	8553170	7	235,102,175,165,65,86,1272,	0,994,2534,3635,4187,4922,7429,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	80228488	80335364	chrX:80228488-80335364	7	-	80228488	80228488	16724991	6	6102,152,108,147,155,149,	0,60417,61175,62389,81590,106727,
#Partially deleted in new
chrX	80272064	80335227	chrX:80272064-80335227	5	-	80272064	80272064	16724991	8	45,73,44,108,67,147,97,16,	0,1267,10507,17599,17774,18813,38014,63147,
#Partially deleted in new
chrX	80335503	80445311	chrX:80335503-80445311	3	+	80442539	80443709	789624	5	61,67,65,123,2790,	0,146,6996,103106,107018,
#Partially deleted in new
chrX	80420465	80445311	chrX:80420465-80445311	1	+	80442539	80443709	789624	3	98,123,2790,	0,18144,22056,
#Deleted in new
chrX	80529036	80530027	chrX:80529036-80530027	7	+	80529036	80529036	16724991	2	301,282,	0,709,
#Deleted in new
chrX	80560145	80562054	chrX:80560145-80562054	7	+	80560145	80560145	16724991	1	1909,	0,
#Deleted in new
chrX	80571870	80574607	chrX:80571870-80574607	7	-	80571870	80571870	16724991	1	2737,	0,
#Partially deleted in new
chrX	80670853	80809688	chrX:80670853-80809688	3	-	80676608	80809471	789624	41	6510,159,98,164,153,75,141,57,79,126,121,156,62,112,83,125,108,114,169,77,150,94,187,168,226,129,135,154,105,41,101,71,101,222,161,99,151,60,30,59,248,	0,10487,11143,11611,13156,14608,16009,17215,18914,19113,20199,20969,21235,22086,25054,25885,29103,32626,33824,36573,38574,45303,46719,48635,51708,52894,54079,57898,59062,62602,63264,64273,65134,73178,74715,121000,122768,137685,138159,138392,138587,
#Partially deleted in new
chrX	80677244	80722573	chrX:80677244-80722573	0	-	80677244	80677244	8553170	25	119,159,98,164,73,75,141,57,79,126,121,156,62,112,83,125,108,114,169,77,150,94,187,168,12,	0,4096,4752,5220,6845,8217,9618,10824,12523,12722,13808,14578,14844,15695,18663,19494,22712,26235,27433,30182,32183,38912,40328,42244,45317,
#Deleted in new
chrX	80709927	80710705	chrX:80709927-80710705	7	+	80709927	80709927	16724991	1	778,	0,
#Deleted in new
chrX	80716882	80719570	chrX:80716882-80719570	0	-	80716882	80716882	8553170	2	877,82,	0,2606,
#Deleted in new
chrX	80733157	80734145	chrX:80733157-80734145	0	-	80733157	80733157	8553170	2	339,28,	0,960,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	80743706	80809683	chrX:80743706-80809683	0	-	80743706	80743706	8553170	8	547,161,99,151,60,30,59,243,	0,1862,48147,49915,64832,65306,65539,65734,
#Deleted in new
chrX	80857075	80857202	chrX:80857075-80857202	3	-	80857075	80857075	8553170	1	127,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	80900756	80900864	chrX:80900756-80900864	3	+	80900756	80900756	8553170	1	108,	0,
#Partially deleted in new
chrX	80929499	80930347	chrX:80929499-80930347	7	+	80929499	80929499	16724991	1	848,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	80936433	80936540	chrX:80936433-80936540	3	+	80936433	80936433	8553170	1	107,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	81000149	81004217	chrX:81000149-81004217	3	-	81000149	81000149	8553170	1	4068,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	81113700	81201942	chrX:81113700-81201942	3	-	81114648	81121549	789624	7	1530,138,54,30,30,138,206,	0,2503,4731,5029,6087,7834,88036,
#Partially deleted in new
chrX	81114834	81121688	chrX:81114834-81121688	0	-	81114834	81121549	789624	4	396,138,54,154,	0,1369,3597,6700,
#Partially deleted in new
chrX	81114984	81121638	chrX:81114984-81121638	0	-	81114984	81121549	789624	5	246,138,54,30,104,	0,1219,3447,3745,6550,
#Partially deleted in new
chrX	81115053	81121683	chrX:81115053-81121683	0	-	81115053	81121549	789624	6	177,138,54,30,30,149,	0,1150,3378,3676,4734,6481,
#Partially deleted in new
chrX	81115110	81121688	chrX:81115110-81121688	0	-	81115110	81115110	8553170	6	120,138,54,51,30,154,	0,1093,3321,3619,4677,6424,
#Partially deleted in new
chrX	81201942	81298547	chrX:81201942-81298547	3	+	81202200	81297227	0	4	303,186,81,1353,	0,75041,76388,95252,
#Partially deleted in new
chrX	81202127	81297597	chrX:81202127-81297597	0	+	81202127	81202127	8553170	5	118,140,186,81,403,	0,309,74856,76203,95067,
#Partially deleted in new
chrX	81202629	81297591	chrX:81202629-81297591	0	+	81202629	81202629	8553170	4	91,186,81,397,	0,74354,75701,94565,
#Partially deleted in new
chrX	81255493	81297516	chrX:81255493-81297516	0	+	81255493	81255493	8553170	4	150,186,81,322,	0,21490,22837,41701,
#Deleted in new
chrX	81363267	81364170	chrX:81363267-81364170	7	+	81363267	81363267	16724991	1	903,	0,
#Partially deleted in new
chrX	81408937	81427276	chrX:81408937-81427276	7	+	81408937	81408937	16724991	5	222,198,88,71,168,	0,4516,12451,15624,18171,
#Partially deleted in new
chrX	81600071	81601306	chrX:81600071-81601306	7	+	81600071	81600071	16724991	1	1235,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	82001219	82001327	chrX:82001219-82001327	3	-	82001219	82001219	8553170	1	108,	0,
#Deleted in new
chrX	82497668	82497924	chrX:82497668-82497924	7	-	82497668	82497668	16724991	1	256,	0,
#Deleted in new
chrX	82506433	82506812	chrX:82506433-82506812	7	-	82506433	82506433	16724991	1	379,	0,
#Deleted in new
chrX	82561200	82561347	chrX:82561200-82561347	3	+	82561200	82561200	8553170	1	147,	0,
#Deleted in new
chrX	82875648	82875885	chrX:82875648-82875885	7	+	82875648	82875648	16724991	1	237,	0,
#Partially deleted in new
chrX	82998698	82999236	chrX:82998698-82999236	7	+	82998698	82998698	16724991	1	538,	0,
#Deleted in new
chrX	83506022	83509214	chrX:83506022-83509214	3	-	83506022	83506022	8553170	1	3192,	0,
#Deleted in new
chrX	83508260	83512127	chrX:83508260-83512127	3	+	83508324	83509410	789624	1	3867,	0,
#Deleted in new
chrX	83508292	83512127	chrX:83508292-83512127	1	+	83508324	83509410	789624	1	3835,	0,
#Deleted in new
chrX	83559895	83560312	chrX:83559895-83560312	7	-	83559895	83559895	16724991	1	417,	0,
#Deleted in new
chrX	83748824	83749939	chrX:83748824-83749939	7	-	83748824	83748824	16724991	1	1115,	0,
#Partially deleted in new
chrX	83861125	83886699	chrX:83861125-83886699	1	+	83861182	83886584	789624	4	71,41,119,148,	0,8739,10326,25426,
#Partially deleted in new
chrX	83861145	83886697	chrX:83861145-83886697	3	+	83861182	83886584	789624	5	54,41,119,1746,146,	0,8719,10306,11740,25406,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chrX	84058345	84186141	chrX:84058345-84186141	1	-	84064276	84186141	789624	22	6057,141,118,77,162,159,90,123,131,103,59,89,71,143,38,107,80,81,82,117,60,81,	0,6625,37848,39426,43691,46153,47441,48019,48564,49277,57883,58714,59038,61539,76436,76758,87132,88632,89696,97729,105982,127715,
#Partially deleted in new
chrX	84063975	84187907	chrX:84063975-84187907	3	-	84064276	84187899	789624	22	427,141,118,77,162,159,90,123,131,103,59,89,71,143,38,107,80,81,82,117,60,89,	0,995,32218,33796,38061,40523,41811,42389,42934,43647,52253,53084,53408,55909,70806,71128,81502,83002,84066,92099,100352,123843,
#Partially deleted in new
chrX	84096193	84106461	chrX:84096193-84106461	0	-	84096193	84096193	8553170	6	118,77,56,166,90,97,	0,1578,5843,8298,9593,10171,
#Partially deleted in new
chrX	84156074	84187898	chrX:84156074-84187898	0	-	84156074	84156074	8553170	6	117,60,110,112,96,80,	0,8253,29986,30688,31289,31744,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	84225751	84225828	chrX:84225751-84225828	3	-	84225751	84225751	5263520	1	77,	0,
#Partially deleted in new
chrX	84317873	84502453	chrX:84317873-84502453	3	-	84321888	84475397	0	10	4141,123,84,80,208,147,54,1104,147,112,	0,8304,15885,18927,26376,43592,122658,150598,157377,184468,
#Partially deleted in new
chrX	84317877	84502453	chrX:84317877-84502453	1	-	84321888	84469548	0	10	4137,123,84,80,208,147,54,1104,109,112,	0,8300,15881,18923,26372,43588,122654,150594,170146,184464,
#Partially deleted in new
chrX	84321196	84502391	chrX:84321196-84502391	1	-	84321888	84475397	0	11	818,123,84,80,208,147,54,1104,147,109,50,	0,4981,12562,15604,23053,40269,119335,147275,154054,166827,181145,
#Partially deleted in new
chrX	84403897	84404024	chrX:84403897-84404024	7	-	84403897	84403897	16724991	1	127,	0,
#Partially deleted in new
chrX	84439972	84469576	chrX:84439972-84469576	0	-	84439972	84439972	8553170	2	613,1105,	0,28499,
#Partially deleted in new
chrX	84468927	84502479	chrX:84468927-84502479	0	-	84468927	84469548	789624	2	648,138,	0,33414,
#Partially deleted in new
chrX	84500024	84502453	chrX:84500024-84502453	0	-	84500024	84500024	8553170	3	280,83,112,	0,1404,2317,
#Deleted in new
chrX	84755135	84756003	chrX:84755135-84756003	7	+	84755135	84755135	16724991	1	868,	0,
#Deleted in new
chrX	84934150	84934890	chrX:84934150-84934890	7	+	84934150	84934150	16724991	1	740,	0,
#Deleted in new
chrX	84934241	84934819	chrX:84934241-84934819	4	+	84934241	84934241	16724991	2	114,351,	0,227,
#Deleted in new
chrX	84934259	84934869	chrX:84934259-84934869	4	+	84934259	84934259	16724991	2	96,375,	0,235,
#Deleted in new
chrX	84934539	84934761	chrX:84934539-84934761	5	+	84934539	84934539	16724991	1	222,	0,
#Partially deleted in new
chrX	84973216	84977829	chrX:84973216-84977829	7	+	84973216	84973216	16724991	3	605,390,504,	0,924,4109,
#Partially deleted in new
chrX	85003825	85088063	chrX:85003825-85088063	3	+	85003912	85087678	789624	9	102,105,120,55,99,92,114,118,474,	0,42620,47563,50518,52001,63301,70172,70448,83764,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	85003891	85093316	chrX:85003891-85093316	1	+	85046445	85087678	789624	10	36,105,120,55,99,92,9,105,118,5727,	0,42554,47497,50452,51935,63235,70106,70116,70382,83698,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	85046300	85093316	chrX:85046300-85093316	1	+	85046300	85087678	789624	10	9,6,105,120,55,99,92,114,118,5727,	0,38,145,5088,8043,9526,20826,27697,27973,41289,
#Partially deleted in new
chrX	85092286	85108968	chrX:85092286-85108968	1	-	85092390	85108407	789624	6	275,41,102,81,52,1641,	0,898,1841,2629,11577,15041,
#Partially deleted in new
chrX	85092293	85109048	chrX:85092293-85109048	1	-	85092538	85108968	789624	5	268,102,81,52,1721,	0,1834,2622,11570,15034,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	85092299	85243911	chrX:85092299-85243911	1	-	85092390	85108968	789624	12	205,41,102,81,52,1953,107,58,118,178,122,324,	0,885,1828,2616,11564,15028,23808,25191,26038,50541,131905,151288,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	85092305	85243961	chrX:85092305-85243961	3	-	85092390	85108968	789624	8	256,41,102,81,52,1953,122,374,	0,879,1822,2610,11558,15022,131899,151282,
#Duplicated in new
chrX	85092310	85243779	chrX:85092310-85243779	1	-	85092390	85108968	789624	13	251,41,102,81,52,1953,107,121,58,153,178,122,192,	0,874,1817,2605,11553,15017,23797,24973,25180,50299,50530,131894,151277,
#Partially deleted in new
chrX	85143426	85156444	chrX:85143426-85156444	7	+	85143426	85143426	16724991	3	69,197,128,	0,10289,12890,
#Partially deleted in new
chrX	85207186	85210649	chrX:85207186-85210649	7	+	85207186	85207186	16724991	3	121,329,381,	0,348,3082,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	85208775	85243870	chrX:85208775-85243870	0	-	85208775	85208775	8553170	3	3302,122,283,	0,15429,34812,
#Partially deleted in new
chrX	85210705	85219698	chrX:85210705-85219698	3	+	85210705	85210705	789624	4	206,83,197,649,	0,1305,1976,8344,
#Partially deleted in new
chrX	85244031	85273360	chrX:85244031-85273360	3	+	85247572	85271828	789624	9	160,120,105,543,156,138,48,144,2710,	0,1871,3515,11227,20243,21086,24262,25971,26619,
#Partially deleted in new
chrX	85244083	85271921	chrX:85244083-85271921	1	+	85247572	85271828	789624	10	108,120,254,105,543,156,138,48,144,1271,	0,1819,2846,3463,11175,20191,21034,24210,25919,26567,
#Partially deleted in new
chrX	85244764	85273362	chrX:85244764-85273362	1	+	85247572	85271828	789624	10	123,120,722,543,156,138,138,48,144,2712,	0,1138,2165,10494,19510,20353,22513,23529,25238,25886,
#Partially deleted in new
chrX	85277395	85379743	chrX:85277395-85379743	3	-	85279420	85379454	0	17	2031,115,83,129,120,153,114,93,75,28,131,183,102,81,75,323,105,	0,4807,26010,26947,28395,28785,29767,30728,37036,38311,53553,68464,73954,82154,90296,101777,102243,
#Partially deleted in new
chrX	85282114	85379717	chrX:85282114-85379717	1	-	85282178	85379454	0	16	203,83,129,120,153,114,93,75,28,131,183,102,81,75,323,79,	0,21291,22228,23676,24066,25048,26009,32317,33592,48834,63745,69235,77435,85577,97058,97524,
#Partially deleted in new
chrX	85835779	85835858	chrX:85835779-85835858	3	+	85835779	85835779	5263520	1	79,	0,
#Partially deleted in new
chrX	85849409	85850139	chrX:85849409-85850139	7	-	85849409	85849409	16724991	1	730,	0,
#Partially deleted in new
chrX	85851574	85851682	chrX:85851574-85851682	7	-	85851574	85851574	16724991	1	108,	0,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chrX	85861179	86047562	chrX:85861179-86047562	3	-	85864629	86047532	789624	15	3642,161,99,97,64,105,78,226,121,117,388,125,73,67,79,	0,11872,17785,33008,39466,39904,50081,94973,96675,97681,102485,117587,120557,166311,186304,
#Partially deleted in new
chrX	85861180	86047305	chrX:85861180-86047305	0	-	85861180	85861180	8553170	3	1914,67,59,	0,166310,186066,
#Deleted in new
chrX	85903635	85903707	chrX:85903635-85903707	3	-	85903635	85903635	5263520	1	72,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	85969086	86047539	chrX:85969086-86047539	1	-	85971567	86047532	789624	5	2500,125,73,67,56,	0,9680,12650,58404,78397,
#Partially deleted in new
chrX	85978655	85981809	chrX:85978655-85981809	0	-	85978655	85978655	8553170	2	236,73,	0,3081,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	86019607	86019715	chrX:86019607-86019715	3	+	86019607	86019607	8553170	1	108,	0,
#Partially deleted in new
chrX	86026957	86047561	chrX:86026957-86047561	0	-	86026957	86026957	8553170	2	600,78,	0,20526,
#Deleted in new
chrX	86066226	86066468	chrX:86066226-86066468	7	-	86066226	86066226	16724991	1	242,	0,
#Partially deleted in new
chrX	86084715	86086339	chrX:86084715-86086339	7	-	86084715	86084715	16724991	1	1624,	0,
#Deleted in new
chrX	86128892	86129570	chrX:86128892-86129570	7	-	86128892	86128892	16724991	1	678,	0,
#Partially deleted in new
chrX	86148457	86832602	chrX:86148457-86832602	1	+	86148620	86827770	789624	12	651,113,132,159,173,136,149,148,147,66,47,497,	0,365821,502578,546563,566090,591289,664398,664672,666230,667576,679308,683648,
#Partially deleted in new
chrX	86148459	86832604	chrX:86148459-86832604	0	+	86148620	86742725	789624	13	649,39,113,132,159,173,136,84,149,148,147,66,499,	0,228364,365819,502576,546561,566088,591287,594183,664396,664670,666228,667574,683646,
#Partially deleted in new
chrX	86148620	86832587	chrX:86148620-86832587	3	+	86148620	86832155	789624	12	488,39,113,132,159,173,136,149,148,147,66,482,	0,228203,365658,502415,546400,565927,591126,664235,664509,666067,667413,683485,
#Deleted in new
chrX	86160263	86161359	chrX:86160263-86161359	7	-	86160263	86160263	16724991	1	1096,	0,
#Partially deleted in new
chrX	86262967	86832574	chrX:86262967-86832574	1	+	86376836	86832155	789624	12	44,39,113,132,159,173,136,149,148,147,66,469,	0,113856,251311,388068,432053,451580,476779,549888,550162,551720,553066,569138,
#Partially deleted in new
chrX	86262967	86832602	chrX:86262967-86832602	1	+	86651052	86832155	789624	11	44,113,132,159,173,136,149,148,147,66,497,	0,251311,388068,432053,451580,476779,549888,550162,551720,553066,569138,
#Partially deleted in new
chrX	86304366	86305086	chrX:86304366-86305086	7	+	86304366	86304366	16724991	1	720,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	86481027	86481130	chrX:86481027-86481130	3	+	86481027	86481027	8553170	1	103,	0,
#Partially deleted in new
chrX	86481531	86481813	chrX:86481531-86481813	7	+	86481531	86481531	16724991	1	282,	0,
#Partially deleted in new
chrX	86514263	86832602	chrX:86514263-86832602	1	+	86514263	86832155	789624	11	6,118,132,159,173,136,149,148,147,66,497,	0,10,136772,180757,200284,225483,298592,298866,300424,301770,317842,
#Partially deleted in new
chrX	86714651	86832602	chrX:86714651-86832602	0	+	86714651	86827770	789624	7	69,136,179,148,147,66,4837,	0,25095,98204,98478,100036,101382,113114,
#Partially deleted in new
chrX	86798597	86799226	chrX:86798597-86799226	7	-	86798597	86798597	16724991	1	629,	0,
#Partially deleted in new
chrX	86888585	86888816	chrX:86888585-86888816	7	+	86888585	86888585	16724991	1	231,	0,
#Partially deleted in new
chrX	87143853	87144748	chrX:87143853-87144748	7	-	87143853	87143853	16724991	2	371,171,	0,724,
#Deleted in new
chrX	87146732	87146804	chrX:87146732-87146804	3	+	87146732	87146732	8553170	1	72,	0,
#Deleted in new
chrX	87425582	87425690	chrX:87425582-87425690	7	-	87425582	87425582	16724991	1	108,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	87517748	87670050	chrX:87517748-87670050	1	+	87517893	87666534	789624	11	567,168,137,197,213,187,225,163,213,172,3576,	0,96128,96685,100183,104462,107861,114461,116000,117814,147015,148726,
#Partially deleted in new
chrX	87517813	87669596	chrX:87517813-87669596	3	+	87517893	87669394	789624	11	502,168,137,197,213,187,225,163,213,172,268,	0,96063,96620,100118,104397,107796,114396,115935,117749,146950,151515,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	87703342	87704203	chrX:87703342-87704203	7	-	87703342	87703342	16724991	1	861,	0,
#Partially deleted in new
chrX	87723088	87723238	chrX:87723088-87723238	7	-	87723088	87723088	16724991	1	150,	0,
#Deleted in new
chrX	87806432	87806769	chrX:87806432-87806769	7	-	87806432	87806432	16724991	1	337,	0,
#Partially deleted in new
chrX	87807548	87809883	chrX:87807548-87809883	7	-	87807548	87807548	16724991	2	238,613,	0,1722,
#Partially deleted in new
chrX	88061589	88062844	chrX:88061589-88062844	7	-	88061589	88061589	16724991	1	1255,	0,
#Partially deleted in new
chrX	88096392	88097225	chrX:88096392-88097225	7	-	88096392	88096392	16724991	1	833,	0,
#Partially deleted in new
chrX	88148791	88148918	chrX:88148791-88148918	3	+	88148791	88148791	8553170	1	127,	0,
#Deleted in new
chrX	88369342	88369459	chrX:88369342-88369459	7	+	88369342	88369342	16724991	1	117,	0,
#Partially deleted in new
chrX	88747224	88754785	chrX:88747224-88754785	3	+	88753414	88754320	789624	3	145,106,1379,	0,2093,6182,
#Partially deleted in new
chrX	88747234	88754780	chrX:88747234-88754780	1	+	88753414	88754320	789624	3	97,106,1374,	0,2083,6172,
#Partially deleted in new
chrX	88749317	88754785	chrX:88749317-88754785	1	+	88753414	88754320	789624	2	106,1379,	0,4089,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	88827553	88829858	chrX:88827553-88829858	7	-	88827553	88827553	16724991	2	469,316,	0,1989,
#Deleted in new
chrX	88908402	88908763	chrX:88908402-88908763	7	+	88908402	88908402	16724991	1	361,	0,
#Partially deleted in new
chrX	88982214	88982353	chrX:88982214-88982353	7	-	88982214	88982214	16724991	1	139,	0,
#Deleted in new
chrX	89367434	89367600	chrX:89367434-89367600	7	-	89367434	89367434	16724991	1	166,	0,
#Deleted in new
chrX	89921881	89922883	chrX:89921881-89922883	3	+	89922085	89922811	0	2	87,819,	0,183,
#Deleted in new
chrX	89921955	89922883	chrX:89921955-89922883	1	+	89922085	89922811	0	1	928,	0,
#Deleted in new
chrX	90039212	90039834	chrX:90039212-90039834	7	-	90039212	90039212	16724991	1	622,	0,
#Deleted in new
chrX	90112649	90113706	chrX:90112649-90113706	7	+	90112649	90112649	16724991	1	1057,	0,
#Partially deleted in new
chrX	90208894	90209418	chrX:90208894-90209418	7	-	90208894	90208894	16724991	1	524,	0,
#Partially deleted in new
chrX	90209795	90210420	chrX:90209795-90210420	7	-	90209795	90209795	16724991	1	625,	0,
#Partially deleted in new
chrX	90289535	90289903	chrX:90289535-90289903	7	-	90289535	90289535	16724991	1	368,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	90597234	90597340	chrX:90597234-90597340	3	-	90597234	90597234	8553170	1	106,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	91307780	91308878	chrX:91307780-91308878	3	+	91307780	91307780	8553170	2	152,589,	0,509,
#Partially deleted in new
chrX	91414877	91434999	chrX:91414877-91434999	3	-	91414877	91414877	789624	4	172,69,88,97,	0,3447,3906,20025,
#Partially deleted in new
chrX	91422308	91422538	chrX:91422308-91422538	7	+	91422308	91422308	16724991	1	230,	0,
#Partially deleted in new
chrX	91434594	91437000	chrX:91434594-91437000	1	+	91436069	91436726	789624	2	300,962,	0,1444,
#Partially deleted in new
chrX	91434823	91438584	chrX:91434823-91438584	3	+	91435577	91436726	789624	2	71,3150,	0,611,
#Partially deleted in new
chrX	91560435	91561597	chrX:91560435-91561597	7	-	91560435	91560435	16724991	1	1162,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	91779260	91884007	chrX:91779260-91884007	0	+	91779260	91779260	8553170	6	424,106,59,584,2493,1101,	0,31212,31976,56200,97520,103646,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	91798092	91798283	chrX:91798092-91798283	3	+	91798092	91798092	8553170	1	191,	0,
#Partially deleted in new
chrX	91834659	91879998	chrX:91834659-91879998	0	+	91834659	91834659	8553170	2	1385,3218,	0,42121,
#Partially deleted in new
chrX	91834659	92623230	chrX:91834659-92623230	3	+	91835504	92618940	789624	7	1385,2493,81,30,199,24,4967,	0,42121,366715,428454,553075,633639,783604,
#Partially deleted in new
chrX	91834659	92623227	chrX:91834659-92623227	1	+	91835504	92618940	789624	6	1385,2493,81,199,24,4964,	0,42121,366715,553075,633639,783604,
#Partially deleted in new
chrX	91835504	92619076	chrX:91835504-92619076	1	+	91835504	92618940	789624	5	540,2493,81,199,813,	0,41276,365870,552230,782759,
#Partially deleted in new
chrX	91835504	92619076	chrX:91835504-92619076	1	+	91835504	92618940	789624	5	540,2493,199,24,813,	0,41276,552230,632794,782759,
#Partially deleted in new
chrX	91835504	92619076	chrX:91835504-92619076	1	+	91835504	92618940	789624	6	540,2493,81,30,199,813,	0,41276,365870,427609,552230,782759,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	91835504	92619076	chrX:91835504-92619076	1	+	91835504	92468316	789624	7	540,2493,81,30,36,24,813,	0,41276,365870,427609,452462,632794,782759,
#Partially deleted in new
chrX	91982654	91983505	chrX:91982654-91983505	7	-	91982654	91982654	16724991	1	851,	0,
#Partially deleted in new
chrX	92113245	92114461	chrX:92113245-92114461	7	-	92113245	92113245	16724991	1	1216,	0,
#Deleted in new
chrX	92459669	92460952	chrX:92459669-92460952	7	+	92459669	92459669	16724991	1	1283,	0,
#Deleted in new
chrX	92515322	92515497	chrX:92515322-92515497	7	-	92515322	92515322	16724991	1	175,	0,
#Partially deleted in new
chrX	92676518	92676954	chrX:92676518-92676954	7	-	92676518	92676518	16724991	1	436,	0,
#Deleted in new
chrX	92770854	92772091	chrX:92770854-92772091	7	+	92770854	92770854	16724991	1	1237,	0,
#Deleted in new
chrX	93042489	93042942	chrX:93042489-93042942	7	+	93042489	93042489	16724991	1	453,	0,
#Deleted in new
chrX	93222219	93225015	chrX:93222219-93225015	7	-	93222219	93222219	16724991	1	2796,	0,
#Deleted in new
chrX	93287732	93288759	chrX:93287732-93288759	7	-	93287732	93287732	16724991	1	1027,	0,
#Deleted in new
chrX	93388074	93389497	chrX:93388074-93389497	7	-	93388074	93388074	16724991	1	1423,	0,
#Deleted in new
chrX	93573833	93574579	chrX:93573833-93574579	7	+	93573833	93573833	16724991	1	746,	0,
#Deleted in new
chrX	93670929	93673568	chrX:93670929-93673568	3	-	93671783	93673304	789624	1	2639,	0,
#Deleted in new
chrX	93670934	93673568	chrX:93670934-93673568	1	-	93671783	93673283	789624	2	2363,192,	0,2442,
#Partially deleted in new
chrX	93674012	93712274	chrX:93674012-93712274	3	+	93709419	93710166	789624	3	262,72,2958,	0,668,35304,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	93674205	93712265	chrX:93674205-93712265	1	+	93709419	93710166	789624	4	69,52,89,2949,	0,495,24191,35111,
#Deleted in new
chrX	93776910	93777384	chrX:93776910-93777384	7	-	93776910	93776910	16724991	1	474,	0,
#Deleted in new
chrX	94003814	94003922	chrX:94003814-94003922	3	-	94003814	94003814	8553170	1	108,	0,
#Deleted in new
chrX	94178004	94178106	chrX:94178004-94178106	3	+	94178004	94178004	8553170	1	102,	0,
#Deleted in new
chrX	94319037	94320025	chrX:94319037-94320025	7	+	94319037	94319037	16724991	1	988,	0,
#Partially deleted in new
chrX	94636662	94639570	chrX:94636662-94639570	7	-	94636662	94636662	16724991	2	832,130,	0,2778,
#Deleted in new
chrX	94776738	94777567	chrX:94776738-94777567	7	-	94776738	94776738	16724991	1	829,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	95063140	95063226	chrX:95063140-95063226	3	-	95063140	95063140	5263520	1	86,	0,
#Deleted in new
chrX	95453368	95453581	chrX:95453368-95453581	7	+	95453368	95453368	16724991	1	213,	0,
#Deleted in new
chrX	95499603	95500036	chrX:95499603-95500036	7	+	95499603	95499603	16724991	1	433,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	95582063	95582162	chrX:95582063-95582162	7	+	95582063	95582063	16724991	1	99,	0,
#Deleted in new
chrX	95584302	95584942	chrX:95584302-95584942	7	+	95584302	95584302	16724991	1	640,	0,
#Deleted in new
chrX	95610577	95610957	chrX:95610577-95610957	7	+	95610577	95610577	16724991	1	380,	0,
#Deleted in new
chrX	95638374	95638924	chrX:95638374-95638924	7	+	95638374	95638374	16724991	1	550,	0,
#Deleted in new
chrX	95679129	95679627	chrX:95679129-95679627	7	-	95679129	95679129	16724991	1	498,	0,
#Deleted in new
chrX	95720242	95721144	chrX:95720242-95721144	7	+	95720242	95720242	16724991	1	902,	0,
#Partially deleted in new
chrX	95973327	95974315	chrX:95973327-95974315	7	-	95973327	95973327	16724991	1	988,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	96023359	96023652	chrX:96023359-96023652	3	+	96023359	96023359	8553170	1	293,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	96070668	96071778	chrX:96070668-96071778	7	-	96070668	96070668	16724991	1	1110,	0,
#Deleted in new
chrX	96195476	96195617	chrX:96195476-96195617	7	+	96195476	96195476	16724991	1	141,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	96337235	96337912	chrX:96337235-96337912	7	-	96337235	96337235	16724991	1	677,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	96410431	96410782	chrX:96410431-96410782	3	-	96410431	96410431	8553170	1	351,	0,
#Deleted in new
chrX	96620653	96621903	chrX:96620653-96621903	7	+	96620653	96620653	16724991	1	1250,	0,
#Partially deleted in new
chrX	96684662	97469838	chrX:96684662-97469838	1	+	96685058	97469743	789624	27	528,33,177,105,140,75,70,137,109,111,119,117,119,65,105,321,115,102,95,102,240,130,127,163,136,96,145,	0,51095,53923,73491,196916,227665,227820,231775,233846,246070,252570,254603,257355,260864,264272,273165,280430,388278,390504,415031,430063,457002,563052,663455,699246,744987,785031,
#Partially deleted in new
chrX	96684662	97600598	chrX:96684662-97600598	1	+	96685058	97599317	789624	27	528,33,177,105,140,75,70,137,109,111,119,117,119,65,105,321,115,102,95,102,240,130,127,163,136,96,1346,	0,51095,53923,73491,196916,227665,227820,231775,233846,246070,252570,254603,257355,260864,264272,273165,280430,388278,390504,415031,430063,457002,563052,663455,699246,744987,914590,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chrX	96684711	97604997	chrX:96684711-97604997	3	+	96685058	97599317	789624	27	479,33,177,105,140,75,70,137,109,111,119,117,119,65,105,321,115,102,95,102,240,130,125,165,136,96,5745,	0,51046,53874,73442,196867,227616,227771,231726,233797,246021,252521,254554,257306,260815,264223,273116,280381,388229,390455,414982,430014,456953,563003,663404,699197,744938,914541,
#Partially deleted in new
chrX	96684711	97469835	chrX:96684711-97469835	1	+	96685058	97469743	789624	27	479,33,177,105,140,75,70,137,109,111,119,117,119,65,105,321,115,102,95,102,240,130,125,165,136,96,142,	0,51046,53874,73442,196867,227616,227771,231726,233797,246021,252521,254554,257306,260815,264223,273116,280381,388229,390455,414982,430014,456953,563003,663404,699197,744938,784982,
#Partially deleted in new
chrX	96685016	97469765	chrX:96685016-97469765	1	+	96685058	97469743	789624	28	174,33,177,105,21,140,75,70,137,109,111,119,117,119,65,105,321,115,102,95,102,240,130,127,163,136,96,72,	0,50741,53569,73137,78083,196562,227311,227466,231421,233492,245716,252216,254249,257001,260510,263918,272811,280076,387924,390150,414677,429709,456648,562698,663101,698892,744633,784677,
#Deleted in new
chrX	96883907	96885467	chrX:96883907-96885467	3	+	96884310	96885096	789624	1	1560,	0,
#Deleted in new
chrX	96953629	96954195	chrX:96953629-96954195	7	-	96953629	96953629	16724991	1	566,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	97081673	97081956	chrX:97081673-97081956	3	+	97081673	97081673	8553170	1	283,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	97341045	97341344	chrX:97341045-97341344	3	+	97341045	97341045	8553170	1	299,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	97528364	97564533	chrX:97528364-97564533	1	-	97528364	97528364	789624	3	702,118,154,	0,4947,36015,
#Partially deleted in new
chrX	97533172	97617259	chrX:97533172-97617259	1	-	97533172	97533172	8553170	3	257,201,148,	0,69638,83939,
#Partially deleted in new
chrX	97602829	97642589	chrX:97602829-97642589	3	-	97602829	97602829	8553170	3	182,150,118,	0,14282,39642,
#Deleted in new
chrX	97906643	97908090	chrX:97906643-97908090	7	+	97906643	97906643	16724991	1	1447,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	97975877	97978641	chrX:97975877-97978641	7	-	97975877	97975877	16724991	1	2764,	0,
#Deleted in new
chrX	98251678	98252543	chrX:98251678-98252543	7	+	98251678	98251678	16724991	1	865,	0,
#Deleted in new
chrX	98348450	98348748	chrX:98348450-98348748	7	-	98348450	98348450	16724991	1	298,	0,
#Deleted in new
chrX	98389511	98390919	chrX:98389511-98390919	7	+	98389511	98389511	16724991	1	1408,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	98422137	98422809	chrX:98422137-98422809	7	+	98422137	98422137	16724991	2	109,456,	0,216,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	98573809	98645226	chrX:98573809-98645226	1	+	98573809	98573809	8553170	2	123,699,	0,70718,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	98573858	98865564	chrX:98573858-98865564	1	+	98573858	98573858	8553170	6	74,89,47,47,98,954,	0,5127,70669,157672,211168,290752,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	98573874	98865041	chrX:98573874-98865041	0	+	98573874	98573874	8553170	4	58,89,47,431,	0,5111,70653,290736,
#Partially deleted in new
chrX	99656996	99657381	chrX:99656996-99657381	7	+	99656996	99656996	16724991	1	385,	0,
#Deleted in new
chrX	99719363	99721158	chrX:99719363-99721158	7	-	99719363	99719363	16724991	1	1795,	0,
#Deleted in new
chrX	99886739	99887691	chrX:99886739-99887691	7	-	99886739	99886739	16724991	1	952,	0,
#Deleted in new
chrX	100100083	100100172	chrX:100100083-100100172	3	+	100100083	100100083	8553170	1	89,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	100149782	100151340	chrX:100149782-100151340	7	-	100149782	100149782	16724991	1	1558,	0,
#Partially deleted in new
chrX	100155884	100156773	chrX:100155884-100156773	7	-	100155884	100155884	16724991	1	889,	0,
#Partially deleted in new
chrX	100291643	100410273	chrX:100291643-100410273	1	-	100296276	100408597	789624	6	5232,173,59,328,141,3823,	0,50259,59002,110880,111880,114807,
#Partially deleted in new
chrX	100291643	100408597	chrX:100291643-100408597	1	-	100296276	100408597	789624	5	5232,170,59,328,2147,	0,50259,59002,110880,114807,
#Partially deleted in new
chrX	100291645	100408597	chrX:100291645-100408597	3	-	100296276	100408597	789624	5	5230,173,59,328,2147,	0,50257,59000,110878,114805,
#Deleted in new
chrX	100291646	100296300	chrX:100291646-100296300	0	-	100296276	100296300	789624	2	224,105,	0,4549,
#Partially deleted in new
chrX	100350661	100406515	chrX:100350661-100406515	0	-	100350661	100406515	789624	3	43,52,65,	0,51862,55789,
#Partially deleted in new
chrX	100584801	100599885	chrX:100584801-100599885	3	+	100585018	100599717	789624	7	265,132,141,102,154,167,378,	0,429,9093,9459,12702,14214,14706,
#Partially deleted in new
chrX	100593623	100597531	chrX:100593623-100597531	0	+	100593623	100593623	8553170	3	412,102,28,	0,637,3880,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	100627108	100637104	chrX:100627108-100637104	1	-	100630797	100635569	789624	7	2878,108,135,99,75,189,312,	0,3650,6296,6822,8069,8449,9684,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	100628669	100636806	chrX:100628669-100636806	3	-	100630797	100636694	789624	8	1317,108,84,135,99,75,189,199,	0,2089,3815,4735,5261,6508,6888,7938,
#Partially deleted in new
chrX	100632062	100637104	chrX:100632062-100637104	1	-	100632062	100635569	789624	7	6,84,135,99,75,189,312,	0,422,1342,1868,3115,3495,4730,
#Partially deleted in new
chrX	100632540	100636689	chrX:100632540-100636689	0	-	100632540	100632540	8553170	6	28,135,99,75,189,499,	0,864,1390,2637,3017,3650,
#Partially deleted in new
chrX	100633441	100639991	chrX:100633441-100639991	0	-	100633441	100633441	8553170	6	98,99,75,189,312,47,	0,489,1736,2116,3351,6503,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	100644165	100675788	chrX:100644165-100675788	3	+	100646322	100670987	789624	11	350,212,81,192,177,127,122,180,134,122,4982,	0,2027,6619,18010,20608,21077,21370,22588,23108,25082,26641,
#Partially deleted in new
chrX	100644194	100665547	chrX:100644194-100665547	0	+	100646322	100665547	789624	7	321,83,81,192,177,127,12,	0,2127,6590,17981,20579,21048,21341,
#Partially deleted in new
chrX	100644198	100662289	chrX:100644198-100662289	0	+	100644198	100644198	8553170	4	317,81,70,114,	0,6586,16746,17977,
#Partially deleted in new
chrX	100644220	100651095	chrX:100644220-100651095	0	+	100644220	100644220	8553170	3	295,83,311,	0,2101,6564,
#Deleted in new
chrX	100646085	100649489	chrX:100646085-100649489	0	+	100646085	100646085	8553170	2	319,293,	0,3111,
#Partially deleted in new
chrX	100646322	100666884	chrX:100646322-100666884	0	+	100646322	100666884	789624	7	82,81,216,177,127,122,131,	0,4462,15829,18451,18920,19213,20431,
#Partially deleted in new
chrX	100649479	100671079	chrX:100649479-100671079	0	+	100649479	100649479	8553170	10	85,81,192,177,127,122,180,134,122,273,	0,1305,12696,15294,15763,16056,17274,17794,19768,21327,
#Partially deleted in new
chrX	100650185	100665306	chrX:100650185-100665306	0	+	100650185	100650185	8553170	5	70,81,192,177,64,	0,599,11990,14588,15057,
#Partially deleted in new
chrX	100666926	100671144	chrX:100666926-100671144	0	+	100666926	100670854	789624	3	7,134,338,	0,347,3880,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chrX	100674493	100731534	chrX:100674493-100731534	3	-	100676027	100702037	0	17	1683,209,100,109,162,103,179,93,104,91,76,102,103,110,216,180,117,	0,3897,4819,6733,11496,12185,12573,13857,15362,15581,16069,16614,26403,26726,26964,27434,56924,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	100674493	100678783	chrX:100674493-100678783	0	-	100674493	100674493	8553170	2	1683,393,	0,3897,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chrX	100675896	100732121	chrX:100675896-100732121	1	-	100676027	100702037	0	17	280,209,100,109,162,103,179,93,104,91,76,102,103,110,216,180,118,	0,2494,3416,5330,10093,10782,11170,12454,13959,14178,14666,15211,25000,25323,25561,26031,56107,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	100684695	100732120	chrX:100684695-100732120	1	-	100688305	100702037	0	10	3748,104,91,76,102,103,110,216,180,117,	0,5160,5379,5867,6412,16201,16524,16762,17232,47308,
#Deleted in new
chrX	100731413	100732123	chrX:100731413-100732123	0	-	100731413	100731413	8553170	2	92,120,	0,590,
#Partially deleted in new
chrX	100800302	100800784	chrX:100800302-100800784	7	-	100800302	100800302	16724991	1	482,	0,
#Deleted in new
chrX	100801187	100803060	chrX:100801187-100803060	7	+	100801187	100801187	16724991	1	1873,	0,
#Deleted in new
chrX	100815864	100817174	chrX:100815864-100817174	7	-	100815864	100815864	16724991	4	145,192,139,96,	0,184,654,1214,
#Partially deleted in new
chrX	100820358	100840932	chrX:100820358-100840932	1	+	100820416	100838361	789624	15	116,79,170,137,120,138,124,63,60,142,176,293,111,126,219,	0,1168,1892,2933,3527,3761,6275,7681,10449,11156,12375,12821,16980,17880,20355,
#Partially deleted in new
chrX	100820400	100840918	chrX:100820400-100840918	3	+	100820416	100838361	0	14	74,79,170,137,120,138,124,63,142,176,293,111,126,205,	0,1126,1850,2891,3485,3719,6233,7639,11114,12333,12779,16938,17838,20313,
#Partially deleted in new
chrX	100820416	100840923	chrX:100820416-100840923	0	+	100820416	100837409	789624	14	58,79,170,137,120,138,73,63,142,176,90,111,126,210,	0,1110,1834,2875,3469,3703,6268,7623,11098,12317,12763,16922,17822,20297,
#Partially deleted in new
chrX	100820535	100824257	chrX:100820535-100824257	0	+	100820617	100824257	789624	6	113,79,170,137,120,138,	0,991,1715,2756,3350,3584,
#Deleted in new
chrX	100822619	100822752	chrX:100822619-100822752	3	-	100822619	100822619	8553170	1	133,	0,
#Partially deleted in new
chrX	100843323	100874345	chrX:100843323-100874345	1	-	100843951	100874139	789624	12	755,125,147,163,236,93,133,182,152,85,96,251,	0,5306,5956,6448,6827,7909,18847,19068,19345,19835,27395,30771,
#Partially deleted in new
chrX	100843323	100874345	chrX:100843323-100874345	3	-	100843951	100874139	789624	13	755,125,147,163,236,93,133,182,152,85,111,96,251,	0,5306,5956,6448,6827,7909,18847,19068,19345,19835,20161,27395,30771,
#Partially deleted in new
chrX	100843332	100874209	chrX:100843332-100874209	1	-	100843344	100874139	789624	6	115,139,85,111,96,115,	0,19349,19826,20152,27386,30762,
#Partially deleted in new
chrX	100843782	100850336	chrX:100843782-100850336	0	-	100843951	100850336	789624	4	250,96,163,186,	0,5548,5989,6368,
#Partially deleted in new
chrX	100843835	100874209	chrX:100843835-100874209	1	-	100843951	100874139	789624	12	243,125,163,236,93,133,182,152,85,111,96,115,	0,4794,5936,6315,7397,18335,18556,18833,19323,19649,26883,30259,
#Deleted in new
chrX	100855287	100856379	chrX:100855287-100856379	7	-	100855287	100855287	16724991	1	1092,	0,
#Deleted in new
chrX	100887635	100888590	chrX:100887635-100888590	7	-	100887635	100887635	16724991	1	955,	0,
#Deleted in new
chrX	100910711	100911489	chrX:100910711-100911489	7	+	100910711	100910711	16724991	1	778,	0,
#Partially deleted in new
chrX	100913444	100928909	chrX:100913444-100928909	3	-	100914337	100928304	789624	3	1639,269,940,	0,9348,14525,
#Partially deleted in new
chrX	100914298	100929433	chrX:100914298-100929433	1	-	100914998	100928304	789624	2	785,1464,	0,13671,
#Deleted in new
chrX	100956592	100957538	chrX:100956592-100957538	7	+	100956592	100956592	16724991	1	946,	0,
#Partially deleted in new
chrX	100969707	100990829	chrX:100969707-100990829	0	+	100973689	100988506	789624	9	102,73,71,250,106,167,91,181,494,	0,3968,4419,15959,17088,17682,18485,18670,20628,
#Partially deleted in new
chrX	100969710	100990806	chrX:100969710-100990806	3	+	100973689	100990588	789624	8	99,73,71,250,106,167,91,245,	0,3965,4416,15956,17085,17679,18482,20851,
#Partially deleted in new
chrX	100986795	100990679	chrX:100986795-100990679	0	+	100986795	100990679	789624	5	106,167,91,7,118,	0,594,1397,1582,3766,
#Partially deleted in new
chrX	100987403	100990829	chrX:100987403-100990829	0	+	100987403	100988506	789624	4	153,91,181,268,	0,789,974,3158,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrX	101009345	101052116	chrX:101009345-101052116	3	-	101010580	101042289	789624	13	1362,100,120,102,215,95,147,71,100,135,55,271,333,	0,9625,9938,11141,11755,12622,14124,26267,27628,28571,31971,32696,42438,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chrX	101009349	101052054	chrX:101009349-101052054	1	-	101010580	101042289	789624	14	1358,100,120,102,215,95,147,71,100,55,271,116,90,238,	0,9621,9934,11137,11751,12618,14120,26263,27624,31967,32692,41901,42294,42467,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chrX	101009541	101052070	chrX:101009541-101052070	1	-	101010580	101042289	789624	14	1166,100,120,102,215,95,147,71,100,135,55,271,90,254,	0,9429,9742,10945,11559,12426,13928,26071,27432,28375,31775,32500,42102,42275,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chrX	101009541	101052083	chrX:101009541-101052083	1	-	101010580	101042289	789624	14	1166,100,120,102,215,95,147,71,100,135,55,271,483,267,	0,9429,9742,10945,11559,12426,13928,26071,27432,28375,31775,32500,41709,42275,
#Partially deleted in new
chrX	101023585	101052082	chrX:101023585-101052082	0	-	101023585	101023585	8553170	7	31,71,100,135,55,80,299,	0,12027,13388,14331,17731,18647,28198,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	101035622	101037539	chrX:101035622-101037539	0	-	101035622	101035622	8553170	2	61,566,	0,1351,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	101043563	101094476	chrX:101043563-101094476	3	-	101043563	101043563	8553170	2	92,113,	0,50800,
#Partially deleted in new
chrX	101078719	101096364	chrX:101078719-101096364	3	+	101079002	101094956	789624	2	403,1792,	0,15853,
#Partially deleted in new
chrX	101081496	101094939	chrX:101081496-101094939	0	+	101081496	101081496	8553170	2	376,367,	0,13076,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	101098217	101101295	chrX:101098217-101101295	0	+	101101070	101101295	789624	4	31,96,257,238,	0,226,1591,2840,
#Partially deleted in new
chrX	101098220	101101205	chrX:101098220-101101205	0	+	101101070	101101205	789624	4	14,96,132,148,	0,223,491,2837,
#Partially deleted in new
chrX	101101047	101162987	chrX:101101047-101162987	1	+	101101070	101162967	789624	20	249,138,119,108,49,47,90,129,168,121,92,118,65,95,136,125,49,219,42,155,	0,1226,8425,8843,19354,19690,25661,26090,26450,27668,28934,31142,31344,39618,44016,45105,46715,46895,60480,61785,
#Deleted in new
chrX	101191114	101191409	chrX:101191114-101191409	7	-	101191114	101191114	16724991	1	295,	0,
#Partially deleted in new
chrX	101219768	101264497	chrX:101219768-101264497	3	+	101231647	101260621	789624	24	137,68,180,164,157,121,269,147,79,61,62,75,202,86,158,167,112,137,66,66,144,238,121,4001,	0,310,11816,16091,17850,19212,21899,22556,23135,25248,25619,27321,28320,28745,30654,31148,32836,34656,35090,35415,36349,38540,40280,40728,
#Partially deleted in new
chrX	101219785	101264497	chrX:101219785-101264497	1	+	101231647	101260621	789624	24	361,103,180,164,157,121,269,147,79,61,62,75,202,86,158,167,112,137,66,66,144,238,121,4001,	0,4818,11799,16074,17833,19195,21882,22539,23118,25231,25602,27304,28303,28728,30637,31131,32819,34639,35073,35398,36332,38523,40263,40711,
#Partially deleted in new
chrX	101219943	101264496	chrX:101219943-101264496	1	+	101235976	101260621	789624	22	203,164,157,121,269,147,79,61,62,75,202,86,158,167,112,137,66,66,144,238,121,4000,	0,15916,17675,19037,21724,22381,22960,25073,25444,27146,28145,28570,30479,30973,32661,34481,34915,35240,36174,38365,40105,40553,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chrX	101219994	101251820	chrX:101219994-101251820	0	+	101231647	101242990	789624	16	152,103,180,164,157,121,269,147,195,61,62,75,202,86,158,904,	0,4609,11590,15865,17624,18986,21673,22330,22909,25022,25393,27095,28094,28519,30428,30922,
#Partially deleted in new
chrX	101231544	101264496	chrX:101231544-101264496	1	+	101231647	101260621	789624	22	220,164,157,121,269,147,79,61,62,75,202,86,158,167,112,137,66,66,144,238,121,4000,	0,4315,6074,7436,10123,10780,11359,13472,13843,15545,16544,16969,18878,19372,21060,22880,23314,23639,24573,26764,28504,28952,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrX	101268252	101293057	chrX:101268252-101293057	3	-	101269192	101293045	789624	13	985,60,113,222,114,73,42,56,127,134,79,68,268,	0,6969,7747,8054,9353,9796,10741,13467,14074,15197,18322,19225,24537,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	101268256	101287805	chrX:101268256-101287805	1	-	101269192	101287543	789624	11	981,60,113,114,73,42,56,127,134,79,328,	0,6965,7743,9349,9792,10737,13463,14070,15193,18318,19221,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrX	101268859	101291336	chrX:101268859-101291336	1	-	101269192	101287543	789624	13	378,60,113,222,114,73,42,56,127,134,79,68,113,	0,6362,7140,7447,8746,9189,10134,12860,13467,14590,17715,18618,22364,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	101325403	101325510	chrX:101325403-101325510	3	+	101325403	101325403	8553170	1	107,	0,
#Deleted in new
chrX	101337724	101338289	chrX:101337724-101338289	7	-	101337724	101337724	16724991	1	565,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	101339916	101340934	chrX:101339916-101340934	7	+	101339916	101339916	16724991	3	61,55,346,	0,315,672,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	101345658	101348749	chrX:101345658-101348749	1	-	101348386	101348664	789624	2	2743,217,	0,2874,
#Partially deleted in new
chrX	101345660	101349196	chrX:101345660-101349196	3	-	101346498	101348664	789624	2	1000,664,	0,2872,
#Partially deleted in new
chrX	101345660	101348685	chrX:101345660-101348685	0	-	101348386	101348664	789624	3	1000,341,153,	0,2400,2872,
#Partially deleted in new
chrX	101345660	101348726	chrX:101345660-101348726	1	-	101346498	101348664	789624	2	1000,194,	0,2872,
#Partially deleted in new
chrX	101345783	101348575	chrX:101345783-101348575	0	-	101345783	101345783	8553170	2	877,649,	0,2143,
#Deleted in new
chrX	101348037	101348726	chrX:101348037-101348726	1	-	101348386	101348664	789624	2	364,194,	0,495,
#Partially deleted in new
chrX	101349446	101386224	chrX:101349446-101386224	1	-	101349884	101375284	789624	17	510,158,119,65,64,80,55,63,188,68,129,82,69,99,171,165,163,	0,3747,4423,5183,8927,9170,9846,10641,11121,12726,13114,20551,22186,25089,25697,28412,36615,
#Partially deleted in new
chrX	101349446	101375284	chrX:101349446-101375284	1	-	101353911	101375284	789624	19	510,158,48,70,65,217,172,75,128,80,55,63,188,68,129,82,69,99,141,	0,3747,4423,4472,5183,6605,7337,8062,8863,9170,9846,10641,11121,12726,13114,20551,22186,25089,25697,
#Partially deleted in new
chrX	101349446	101390796	chrX:101349446-101390796	1	-	101349884	101390549	0	19	510,158,119,65,217,172,75,128,80,55,63,188,68,129,82,69,99,171,319,	0,3747,4423,5183,6605,7337,8062,8863,9170,9846,10641,11121,12726,13114,20551,22186,25089,25697,41031,
#Partially deleted in new
chrX	101349449	101386195	chrX:101349449-101386195	3	-	101349884	101375284	0	19	507,158,119,65,217,172,75,128,80,55,63,188,68,129,82,69,99,171,134,	0,3744,4420,5180,6602,7334,8059,8860,9167,9843,10638,11118,12723,13111,20548,22183,25086,25694,36612,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	101353042	101353984	chrX:101353042-101353984	0	-	101353042	101353042	8553170	2	309,115,	0,827,
#Deleted in new
chrX	101353318	101354221	chrX:101353318-101354221	0	-	101353318	101353318	8553170	2	33,352,	0,551,
#Deleted in new
chrX	101355584	101356804	chrX:101355584-101356804	0	-	101355584	101355584	8553170	2	684,21,	0,1199,
#Deleted in new
chrX	101356510	101358361	chrX:101356510-101358361	0	-	101356510	101356510	8553170	3	445,75,52,	0,998,1799,
#Deleted in new
chrX	101362190	101362815	chrX:101362190-101362815	0	-	101362190	101362190	8553170	2	50,255,	0,370,
#Partially deleted in new
chrX	101374305	101386148	chrX:101374305-101386148	0	-	101374305	101374305	8553170	3	329,171,87,	0,838,11756,
#Partially deleted in new
chrX	101390823	101396117	chrX:101390823-101396117	1	+	101390935	101395748	789624	5	223,106,68,123,390,	0,635,931,4511,4904,
#Partially deleted in new
chrX	101390889	101396154	chrX:101390889-101396154	1	+	101390935	101395748	789624	5	157,106,68,123,427,	0,569,865,4445,4838,
#Partially deleted in new
chrX	101390982	101395795	chrX:101390982-101395795	3	+	101391043	101395748	0	5	64,106,68,123,68,	0,476,772,4352,4745,
#Partially deleted in new
chrX	101390988	101395793	chrX:101390988-101395793	1	+	101391043	101395496	789624	4	58,106,68,459,	0,470,766,4346,
#Partially deleted in new
chrX	101391010	101412297	chrX:101391010-101412297	1	+	101391043	101411992	789624	4	36,106,68,362,	0,448,744,20925,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	101391010	101393852	chrX:101391010-101393852	0	+	101391010	101391010	8553170	3	36,106,2098,	0,448,744,
#Deleted in new
chrX	101391010	101391969	chrX:101391010-101391969	0	+	101391010	101391010	8553170	2	36,511,	0,448,
#Partially deleted in new
chrX	101391011	101412165	chrX:101391011-101412165	3	+	101391043	101411992	789624	5	35,106,68,123,230,	0,447,743,4323,20924,
#Partially deleted in new
chrX	101391015	101395786	chrX:101391015-101395786	0	+	101391043	101392085	789624	6	31,106,68,46,123,59,	0,443,739,1034,4319,4712,
#Partially deleted in new
chrX	101391113	101395795	chrX:101391113-101395795	0	+	101391113	101391113	8553170	4	451,68,123,68,	0,641,4221,4614,
#Partially deleted in new
chrX	101391201	101395795	chrX:101391201-101395795	1	+	101395400	101395748	789624	5	34,106,68,123,68,	0,257,553,4133,4526,
#Deleted in new
chrX	101395152	101395795	chrX:101395152-101395795	0	+	101395152	101395152	8553170	2	305,68,	0,575,
#Partially deleted in new
chrX	101397802	101407925	chrX:101397802-101407925	3	-	101397808	101407903	0	7	297,198,162,92,178,175,216,	0,567,982,2863,3829,6008,9907,
#Partially deleted in new
chrX	101397802	101407908	chrX:101397802-101407908	0	-	101399770	101407903	789624	8	297,198,162,57,92,178,175,199,	0,567,982,1941,2863,3829,6008,9907,
#Deleted in new
chrX	101397806	101398694	chrX:101397806-101398694	0	-	101397806	101397806	8553170	2	293,325,	0,563,
#Partially deleted in new
chrX	101397935	101408012	chrX:101397935-101408012	0	-	101398893	101407903	8553170	6	164,198,162,178,175,303,	0,434,849,3696,5875,9774,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	101398515	101400853	chrX:101398515-101400853	0	-	101398515	101398515	8553170	2	431,188,	0,2150,
#Partially deleted in new
chrX	101398907	101407833	chrX:101398907-101407833	0	-	101398907	101398907	8553170	6	39,92,115,178,175,124,	0,1758,2325,2724,4903,8802,
#Partially deleted in new
chrX	101401369	101407887	chrX:101401369-101407887	0	-	101401369	101401369	8553170	3	440,175,178,	0,2441,6340,
#Partially deleted in new
chrX	101408294	101414133	chrX:101408294-101414133	3	+	101411988	101413338	0	2	25,2198,	0,3641,
#Boundary problem: need 16, got 0, diff 16, mapped 0.0
chrX	101418286	101533459	chrX:101418286-101533459	0	+	101487617	101498189	789624	16	84,91,104,47,70,80,84,92,872,1222,419,69,89,31,229,1816,	0,623,25765,27711,67736,68906,69321,69721,70157,79858,86650,91072,91303,92738,105917,113357,
#Partially deleted in new
chrX	101418297	101446132	chrX:101418297-101446132	0	+	101418297	101418297	8553170	4	73,91,104,135,	0,612,25754,27700,
#Deleted in new
chrX	101418298	101419183	chrX:101418298-101419183	0	+	101418298	101418298	8553170	2	72,274,	0,611,
#Partially deleted in new
chrX	101418781	101447877	chrX:101418781-101447877	0	+	101418781	101418781	8553170	5	43,91,104,47,384,	0,128,25270,27216,28712,
#Partially deleted in new
chrX	101443706	101444103	chrX:101443706-101444103	7	-	101443706	101443706	16724991	1	397,	0,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	101485253	101516954	chrX:101485253-101516954	0	+	101487617	101498170	789624	11	277,70,80,84,56,1222,419,69,89,31,475,	0,769,1939,2354,2790,12891,19683,24105,24336,25771,31226,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrX	101485432	101533459	chrX:101485432-101533459	0	+	101487617	101498189	789624	13	98,76,80,84,92,872,1222,419,64,89,31,369,376,	0,590,1760,2175,2575,3011,12712,19504,23931,24157,25592,46211,47651,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	101485452	101499044	chrX:101485452-101499044	0	+	101487617	101498189	789624	8	78,67,80,84,56,872,191,401,	0,573,1740,2155,2591,2991,12692,13191,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrX	101485455	101533459	chrX:101485455-101533459	0	+	101487617	101498170	789624	13	75,76,80,84,56,1222,419,64,89,31,229,369,376,	0,567,1737,2152,2588,12689,19481,23908,24134,25569,38748,46188,47628,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrX	101485474	101533459	chrX:101485474-101533459	0	+	101487617	101498189	789624	13	56,70,80,84,56,872,1222,419,64,89,31,369,376,	0,548,1718,2133,2569,2969,12670,19462,23889,24115,25550,46169,47609,
#Deleted in new
chrX	101488043	101495811	chrX:101488043-101495811	3	+	101488589	101495462	789624	2	56,7368,	0,400,
#Deleted in new
chrX	101537484	101539276	chrX:101537484-101539276	7	-	101537484	101537484	16724991	1	1792,	0,
#Deleted in new
chrX	101550530	101554700	chrX:101550530-101554700	3	+	101552930	101554292	789624	4	130,54,65,1892,	0,440,1038,2278,
#Partially deleted in new
chrX	101597509	101598071	chrX:101597509-101598071	5	+	101597509	101597509	16724991	1	562,	0,
#Partially deleted in new
chrX	101598016	101598671	chrX:101598016-101598671	7	+	101598016	101598016	16724991	1	655,	0,
#Partially deleted in new
chrX	101615117	101617910	chrX:101615117-101617910	0	-	101615117	101615117	8553170	4	643,95,82,26,	0,1554,2385,2767,
#Partially deleted in new
chrX	101615119	101618001	chrX:101615119-101618001	3	-	101615717	101616620	789624	3	1647,82,117,	0,2383,2765,
#Partially deleted in new
chrX	101615125	101618001	chrX:101615125-101618001	1	-	101615717	101616620	789624	2	1641,117,	0,2759,
#Partially deleted in new
chrX	101615125	101618001	chrX:101615125-101618001	1	-	101615717	101616620	789624	4	1641,88,82,117,	0,2157,2377,2759,
#Partially deleted in new
chrX	101615512	101617913	chrX:101615512-101617913	0	-	101615512	101615512	8553170	5	248,95,88,82,29,	0,1159,1770,1990,2372,
#Partially deleted in new
chrX	101616212	101618000	chrX:101616212-101618000	0	-	101616212	101616212	8553170	2	554,116,	0,1672,
#Partially deleted in new
chrX	101616395	101617976	chrX:101616395-101617976	0	-	101616395	101616395	8553170	4	371,79,82,92,	0,896,1107,1489,
#Partially deleted in new
chrX	101616861	101617914	chrX:101616861-101617914	0	-	101616861	101616861	8553170	2	723,30,	0,1023,
#Partially deleted in new
chrX	101622796	101627843	chrX:101622796-101627843	3	+	101624979	101626119	789624	5	480,108,61,71,3010,	0,989,1361,1683,2037,
#Partially deleted in new
chrX	101622982	101624164	chrX:101622982-101624164	3	-	101622982	101622982	8553170	2	453,37,	0,1145,
#Partially deleted in new
chrX	101623088	101626484	chrX:101623088-101626484	1	+	101624979	101626119	789624	5	188,80,61,71,1651,	0,725,1069,1391,1745,
#Partially deleted in new
chrX	101623126	101625262	chrX:101623126-101625262	0	+	101624979	101625262	789624	5	304,108,61,71,429,	0,659,1031,1353,1707,
#Partially deleted in new
chrX	101623127	101625170	chrX:101623127-101625170	0	+	101624979	101625170	789624	4	149,80,71,337,	0,686,1352,1706,
#Partially deleted in new
chrX	101623174	101624532	chrX:101623174-101624532	0	+	101623174	101623174	8553170	3	719,61,53,	0,983,1305,
#Partially deleted in new
chrX	101623255	101624952	chrX:101623255-101624952	0	+	101623255	101623255	8553170	5	175,80,61,71,119,	0,558,902,1224,1578,
#Partially deleted in new
chrX	101623360	101627841	chrX:101623360-101627841	1	+	101624979	101626119	789624	5	70,108,61,71,3008,	0,425,797,1119,1473,
#Partially deleted in new
chrX	101627867	101628523	chrX:101627867-101628523	3	+	101627867	101627867	8553170	1	656,	0,
#Partially deleted in new
chrX	101655280	101659844	chrX:101655280-101659844	3	-	101655689	101657588	789624	5	2435,70,109,61,87,	0,2792,3180,3795,4477,
#Partially deleted in new
chrX	101655280	101658649	chrX:101655280-101658649	1	-	101655689	101657588	789624	3	2435,70,158,	0,2792,3211,
#Partially deleted in new
chrX	101655466	101659891	chrX:101655466-101659891	1	-	101655689	101657588	789624	6	2249,70,65,73,83,134,	0,2606,2994,3609,3952,4291,
#Partially deleted in new
chrX	101657086	101659834	chrX:101657086-101659834	0	-	101657086	101657588	789624	5	629,70,65,73,77,	0,986,1374,1989,2671,
#Partially deleted in new
chrX	101657092	101658621	chrX:101657092-101658621	0	-	101657092	101657588	789624	3	623,70,161,	0,980,1368,
#Partially deleted in new
chrX	101657274	101659835	chrX:101657274-101659835	0	-	101657274	101657588	789624	6	441,70,65,73,94,78,	0,798,1186,1801,2133,2483,
#Partially deleted in new
chrX	101657310	101659831	chrX:101657310-101659831	0	-	101657310	101657588	789624	6	405,70,65,61,83,74,	0,762,1150,1765,2108,2447,
#Partially deleted in new
chrX	101657356	101658594	chrX:101657356-101658594	0	-	101657356	101657356	8553170	2	786,103,	0,1135,
#Partially deleted in new
chrX	101657400	101659796	chrX:101657400-101659796	0	-	101657400	101657588	789624	5	315,70,73,83,39,	0,672,1675,2018,2357,
#Partially deleted in new
chrX	101657517	101659836	chrX:101657517-101659836	0	-	101657517	101657517	8553170	6	198,70,109,73,83,79,	0,555,943,1558,1901,2240,
#Partially deleted in new
chrX	101657666	101659833	chrX:101657666-101659833	0	-	101657666	101657666	8553170	3	49,70,76,	0,406,2091,
#Partially deleted in new
chrX	101658080	101659177	chrX:101658080-101659177	0	-	101658080	101658080	8553170	3	62,65,102,	0,380,995,
#Partially deleted in new
chrX	101659199	101659830	chrX:101659199-101659830	0	-	101659199	101659199	8553170	2	302,73,	0,558,
#Partially deleted in new
chrX	101683779	101684449	chrX:101683779-101684449	7	+	101683779	101683779	16724991	1	670,	0,
#Partially deleted in new
chrX	101691579	101691685	chrX:101691579-101691685	3	+	101691579	101691579	8553170	1	106,	0,
#Partially deleted in new
chrX	101720339	101721709	chrX:101720339-101721709	7	-	101720339	101720339	16724991	1	1370,	0,
#Partially deleted in new
chrX	101778968	101780538	chrX:101778968-101780538	7	-	101778968	101778968	16724991	1	1570,	0,
#Partially deleted in new
chrX	101832111	101857577	chrX:101832111-101857577	0	-	101836187	101842792	789624	19	279,61,182,98,163,59,56,69,37,110,108,89,70,81,105,84,154,184,73,	0,425,3908,4622,5380,5670,6088,6230,6678,8387,8676,8904,9149,9366,9562,9778,10630,11010,25393,
#Partially deleted in new
chrX	101832111	101857577	chrX:101832111-101857577	0	-	101837475	101842792	789624	17	279,61,182,98,257,59,56,69,37,110,108,89,70,81,154,184,73,	0,425,3908,4622,5286,5670,6088,6230,6678,8387,8676,8904,9149,9366,10630,11010,25393,
#Partially deleted in new
chrX	101832111	101857577	chrX:101832111-101857577	0	-	101836781	101842792	789624	17	279,61,182,73,163,59,56,69,37,110,108,89,70,81,154,184,73,	0,425,3908,4622,5380,5670,6088,6230,6678,8387,8676,8904,9149,9366,10630,11010,25393,
#Partially deleted in new
chrX	101832111	101857577	chrX:101832111-101857577	0	-	101836781	101842792	789624	19	279,61,182,73,163,59,56,69,37,110,108,89,70,81,105,84,154,184,73,	0,425,3908,4622,5380,5670,6088,6230,6678,8387,8676,8904,9149,9366,9562,9778,10630,11010,25393,
#Partially deleted in new
chrX	101832111	101857577	chrX:101832111-101857577	0	-	101840804	101842792	789624	19	279,61,182,73,163,59,56,69,37,110,44,89,70,81,105,84,154,184,73,	0,425,3908,4622,5380,5670,6088,6230,6678,8387,8676,8904,9149,9366,9562,9778,10630,11010,25393,
#Partially deleted in new
chrX	101832111	101843307	chrX:101832111-101843307	1	-	101836187	101842792	789624	18	279,61,182,98,163,59,56,69,37,110,108,89,70,81,105,84,154,186,	0,425,3908,4622,5380,5670,6088,6230,6678,8387,8676,8904,9149,9366,9562,9778,10630,11010,
#Partially deleted in new
chrX	101832197	101843199	chrX:101832197-101843199	3	-	101832266	101842792	789624	15	85,163,59,56,69,37,110,108,89,70,81,105,84,154,78,	0,5294,5584,6002,6144,6592,8301,8590,8818,9063,9280,9476,9692,10544,10924,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	101882657	101890221	chrX:101882657-101890221	0	-	101882657	101882657	8553170	2	2164,3590,	0,3974,
#Partially deleted in new
chrX	101883059	101932031	chrX:101883059-101932031	0	-	101883059	101883059	8553170	9	1762,100,107,451,66,175,102,107,315,	0,3572,4138,11394,12754,14808,15059,21164,48657,
#Partially deleted in new
chrX	101883639	101932027	chrX:101883639-101932027	0	-	101883639	101883639	8553170	10	1182,100,107,50,451,69,175,102,107,311,	0,2992,3558,9065,10814,12174,14228,14479,20584,48077,
#Partially deleted in new
chrX	101884695	101887726	chrX:101884695-101887726	0	-	101884695	101884695	8553170	3	126,100,529,	0,1936,2502,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	101911528	101912072	chrX:101911528-101912072	7	+	101911528	101911528	16724991	1	544,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	101915588	101915695	chrX:101915588-101915695	3	+	101915588	101915588	8553170	1	107,	0,
#Partially deleted in new
chrX	101989480	101989872	chrX:101989480-101989872	7	-	101989480	101989480	16724991	1	392,	0,
#Partially deleted in new
chrX	102006882	102007294	chrX:102006882-102007294	7	+	102006882	102006882	16724991	1	412,	0,
#Partially deleted in new
chrX	102008523	102009046	chrX:102008523-102009046	7	-	102008523	102008523	16724991	1	523,	0,
#Deleted in new
chrX	102125687	102127711	chrX:102125687-102127711	3	+	102126830	102127514	789624	3	119,73,908,	0,685,1116,
#Deleted in new
chrX	102125687	102126900	chrX:102125687-102126900	0	+	102125687	102125687	8553170	2	758,97,	0,1116,
#Deleted in new
chrX	102125702	102127711	chrX:102125702-102127711	1	+	102126830	102127514	789624	3	104,73,903,	0,670,1106,
#Deleted in new
chrX	102140475	102142505	chrX:102140475-102142505	1	-	102140779	102141331	789624	3	880,73,153,	0,1238,1877,
#Deleted in new
chrX	102140709	102142970	chrX:102140709-102142970	3	-	102140779	102141331	789624	3	641,73,269,	0,1004,1992,
#Deleted in new
chrX	102153707	102155790	chrX:102153707-102155790	1	-	102153929	102154265	789624	3	595,67,198,	0,1036,1885,
#Deleted in new
chrX	102153711	102156057	chrX:102153711-102156057	3	-	102153929	102154265	789624	3	591,67,199,	0,1032,2147,
#Deleted in new
chrX	102154739	102155790	chrX:102154739-102155790	0	-	102154739	102154739	8553170	2	71,198,	0,853,
#Partially deleted in new
chrX	102173099	102185021	chrX:102173099-102185021	7	+	102173099	102173099	16724991	7	121,220,137,221,182,163,210,	0,1224,8692,9065,9382,10331,11712,
#Partially deleted in new
chrX	102182314	102184899	chrX:102182314-102184899	4	+	102182314	102182314	16724991	3	71,182,43,	0,167,2542,
#Partially deleted in new
chrX	102215300	102226791	chrX:102215300-102226791	0	+	102215838	102217983	789624	10	40,138,126,121,191,137,221,182,164,427,	0,527,2654,6240,7124,8081,8464,8783,9726,11064,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	102215306	102229532	chrX:102215306-102229532	0	+	102215838	102217983	789624	11	34,138,126,158,221,137,221,182,164,99,235,	0,521,2648,6197,7088,8075,8458,8777,9720,11108,13991,
#Partially deleted in new
chrX	102215838	102226597	chrX:102215838-102226597	3	+	102215838	102226597	789624	9	127,103,121,221,137,221,182,164,233,	0,2139,5702,6556,7543,7926,8245,9188,10526,
#Partially deleted in new
chrX	102247160	102326717	chrX:102247160-102326717	3	+	102307078	102326514	789624	23	78,122,96,190,151,84,105,81,70,89,108,110,37,69,56,108,59,116,43,73,183,61,248,	0,1276,59865,69802,70218,70672,70867,71087,71354,71580,71789,72076,73864,74281,74436,74623,74851,75048,75259,75902,76509,79102,79309,
#Partially deleted in new
chrX	102259042	102261692	chrX:102259042-102261692	7	+	102259042	102259042	16724991	3	256,579,368,	0,774,2282,
#Partially deleted in new
chrX	102307021	102326719	chrX:102307021-102326719	1	+	102307078	102326514	789624	21	100,190,151,84,105,81,70,89,108,110,37,69,56,108,59,116,43,73,183,61,250,	0,9941,10357,10811,11006,11226,11493,11719,11928,12215,14003,14420,14575,14762,14990,15187,15398,16041,16648,19241,19448,
#Partially deleted in new
chrX	102360394	102463274	chrX:102360394-102463274	0	-	102462922	102463274	789624	25	251,61,116,59,108,56,69,37,110,108,89,70,81,105,84,567,206,96,122,108,140,149,164,182,55,	0,397,4396,4650,4829,5068,5210,5659,7374,7663,7891,8136,8392,8588,8804,9191,12556,19599,78158,96412,97278,100202,101525,102450,102825,
#Partially deleted in new
chrX	102360395	102380093	chrX:102360395-102380093	1	-	102360600	102380036	789624	21	250,61,183,73,43,116,59,108,56,69,37,110,108,89,70,81,105,84,151,190,100,	0,396,2867,3584,4257,4395,4649,4828,5067,5209,5658,7373,7662,7890,8135,8391,8587,8803,9190,9567,19598,
#Partially deleted in new
chrX	102360397	102439932	chrX:102360397-102439932	3	-	102360600	102380036	789624	23	248,61,183,73,43,116,59,108,56,69,37,110,108,89,70,81,105,84,151,190,96,122,63,	0,394,2865,3582,4255,4393,4647,4826,5065,5207,5656,7371,7660,7888,8133,8389,8585,8801,9188,9565,19596,78155,79472,
#Partially deleted in new
chrX	102360397	102463164	chrX:102360397-102463164	3	-	102460654	102463164	789624	27	248,61,183,73,43,116,59,108,56,69,37,110,108,89,70,81,105,84,151,190,96,122,140,99,164,182,40,	0,394,2865,3582,4255,4393,4647,4826,5065,5207,5656,7371,7660,7888,8133,8389,8585,8801,9188,9565,19596,78155,97275,100199,101522,102447,102727,
#Deleted in new
chrX	102364631	102365826	chrX:102364631-102365826	0	-	102364631	102364631	8553170	5	275,59,108,56,222,	0,413,592,831,973,
#Partially deleted in new
chrX	102374627	102471812	chrX:102374627-102471812	0	-	102465181	102471274	789624	14	71,96,108,140,99,164,182,126,137,705,121,103,138,40,	0,5366,82179,83045,85969,87292,88217,88592,88964,89867,90821,94405,96520,97145,
#Deleted in new
chrX	102425342	102428080	chrX:102425342-102428080	7	-	102425342	102425342	16724991	3	531,626,259,	0,1390,2479,
#Partially deleted in new
chrX	102456861	102471812	chrX:102456861-102471812	0	-	102469129	102471274	789624	12	53,140,99,164,182,126,137,221,158,126,138,40,	0,811,3735,5058,5983,6358,6730,7633,8587,12171,14286,14911,
#Partially deleted in new
chrX	102460318	102471812	chrX:102460318-102471812	3	-	102460512	102465544	789624	10	427,164,182,221,137,191,121,126,138,40,	0,1601,2526,2806,3273,4176,5130,8714,10829,11454,
#Partially deleted in new
chrX	102460318	102471812	chrX:102460318-102471812	0	-	102469129	102471274	789624	10	427,164,182,221,137,191,121,126,138,40,	0,1601,2526,2806,3273,4176,5130,8714,10829,11454,
#Partially deleted in new
chrX	102460512	102471842	chrX:102460512-102471842	1	-	102460512	102471274	789624	10	233,164,182,221,137,221,121,103,138,70,	0,1407,2332,2612,3079,3982,4936,8520,10635,11260,
#Deleted in new
chrX	102462990	102463504	chrX:102462990-102463504	0	-	102462990	102462990	8553170	2	36,380,	0,134,
#Deleted in new
chrX	102513675	102516784	chrX:102513675-102516784	3	-	102514086	102515163	789624	3	449,117,119,	0,1388,2990,
#Deleted in new
chrX	102546733	102548213	chrX:102546733-102548213	7	-	102546733	102546733	16724991	1	1480,	0,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chrX	102549964	102571695	chrX:102549964-102571695	7	+	102549964	102549964	16724991	17	221,100,133,84,105,81,316,108,110,37,69,56,108,59,1694,61,275,	0,11487,11913,12636,12831,13054,13242,13678,13972,15764,16203,16350,16552,16775,16942,21249,21456,
#Partially deleted in new
chrX	102561934	102571465	chrX:102561934-102571465	5	+	102561934	102561934	16724991	18	76,84,105,81,70,89,108,110,37,69,56,59,116,43,73,183,61,45,	0,666,861,1084,1272,1499,1708,2002,3794,4233,4380,4805,4972,5199,5918,6483,9279,9486,
#Deleted in new
chrX	102599167	102604159	chrX:102599167-102604159	3	+	102602141	102603818	789624	6	99,225,136,113,46,2280,	0,180,544,1752,2296,2712,
#Deleted in new
chrX	102599509	102602164	chrX:102599509-102602164	0	+	102602141	102602164	789624	4	338,113,46,285,	0,1410,1954,2370,
#Partially deleted in new
chrX	102599511	102714582	chrX:102599511-102714582	0	+	102599511	102599511	8553170	6	61,136,172,68,78,46,	0,200,5970,114270,114677,115025,
#Deleted in new
chrX	102599519	102605892	chrX:102599519-102605892	0	+	102599519	102599519	8553170	3	127,64,411,	0,2519,5962,
#Deleted in new
chrX	102599519	102604159	chrX:102599519-102604159	1	+	102602141	102603818	789624	1	4640,	0,
#Deleted in new
chrX	102599521	102602354	chrX:102599521-102602354	0	+	102602141	102602354	789624	3	338,46,475,	0,1942,2358,
#Partially deleted in new
chrX	102599524	102639538	chrX:102599524-102639538	0	+	102599524	102599524	8553170	6	48,142,46,98,172,139,	0,181,1939,2355,5957,39875,
#Partially deleted in new
chrX	102599525	102650145	chrX:102599525-102650145	2	+	102599525	102599525	8553170	6	322,46,98,172,134,192,	0,1938,2354,5956,39874,50428,
#Partially deleted in new
chrX	102599525	102639527	chrX:102599525-102639527	0	+	102599525	102599525	8553170	4	322,46,172,128,	0,1938,5956,39874,
#Partially deleted in new
chrX	102599525	102714199	chrX:102599525-102714199	0	+	102599525	102599525	8553170	4	322,172,68,11,	0,5956,114256,114663,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	102599536	102640507	chrX:102599536-102640507	1	+	102599536	102599536	8553170	6	311,113,46,98,172,1108,	0,1383,1927,2343,5945,39863,
#Partially deleted in new
chrX	102599536	102714671	chrX:102599536-102714671	0	+	102599536	102599536	8553170	7	36,154,46,172,68,78,135,	0,169,1927,5945,114245,114652,115000,
#Deleted in new
chrX	102599537	102602345	chrX:102599537-102602345	0	+	102602141	102602345	789624	3	310,46,466,	0,1926,2342,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	102599656	102659712	chrX:102599656-102659712	3	-	102599656	102599656	8553170	3	259,71,57,	0,49987,59999,
#Deleted in new
chrX	102601136	102604153	chrX:102601136-102604153	1	+	102602141	102603818	789624	2	373,2274,	0,743,
#Deleted in new
chrX	102615472	102615820	chrX:102615472-102615820	7	-	102615472	102615472	16724991	1	348,	0,
#Deleted in new
chrX	102651365	102659083	chrX:102651365-102659083	3	+	102653913	102658101	789624	5	230,91,68,78,5504,	0,809,1465,1855,2214,
#Deleted in new
chrX	102651365	102659080	chrX:102651365-102659080	1	+	102653913	102658101	789624	4	230,68,78,5501,	0,1465,1855,2214,
#Deleted in new
chrX	102651365	102659080	chrX:102651365-102659080	1	+	102653913	102658101	789624	3	230,78,5501,	0,1855,2214,
#Deleted in new
chrX	102651400	102659080	chrX:102651400-102659080	1	+	102653913	102658101	789624	6	195,47,91,68,78,5501,	0,286,774,1430,1820,2179,
#Deleted in new
chrX	102652845	102653815	chrX:102652845-102653815	0	+	102652845	102652845	8553170	2	453,236,	0,734,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	102678706	102678813	chrX:102678706-102678813	3	-	102678706	102678706	8553170	1	107,	0,
#Partially deleted in new
chrX	102705783	102706240	chrX:102705783-102706240	7	+	102705783	102705783	16724991	1	457,	0,
#Partially deleted in new
chrX	102712175	102717733	chrX:102712175-102717733	3	+	102714869	102717386	789624	4	377,68,78,3197,	0,1606,2013,2361,
#Partially deleted in new
chrX	102712175	102717732	chrX:102712175-102717732	1	+	102714869	102717386	789624	4	377,68,78,3324,	0,1606,2013,2233,
#Partially deleted in new
chrX	102712175	102717732	chrX:102712175-102717732	1	+	102714869	102717386	789624	5	377,88,68,78,3324,	0,954,1606,2013,2233,
#Partially deleted in new
chrX	102712389	102714720	chrX:102712389-102714720	0	+	102712389	102712389	8553170	5	163,88,68,78,184,	0,740,1392,1799,2147,
#Partially deleted in new
chrX	102712444	102714814	chrX:102712444-102714814	0	+	102712444	102712444	8553170	5	108,127,68,78,278,	0,646,1337,1744,2092,
#Partially deleted in new
chrX	102720687	102748881	chrX:102720687-102748881	0	+	102720687	102720687	8553170	4	138,71,95,183,	0,269,27129,28011,
#Partially deleted in new
chrX	102720713	102752438	chrX:102720713-102752438	3	+	102748995	102750639	789624	4	112,135,95,3740,	0,243,27103,27985,
#Partially deleted in new
chrX	102720725	102752441	chrX:102720725-102752441	1	+	102748995	102750639	789624	3	96,135,3743,	0,231,27973,
#Partially deleted in new
chrX	102720763	102748735	chrX:102720763-102748735	0	+	102720763	102720763	8553170	4	62,135,79,37,	0,193,27069,27935,
#Partially deleted in new
chrX	102745978	102752438	chrX:102745978-102752438	1	+	102748995	102750639	789624	3	196,95,3740,	0,1838,2720,
#Partially deleted in new
chrX	102745978	102752438	chrX:102745978-102752438	1	+	102748995	102750639	789624	2	196,3740,	0,2720,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	102746093	102753540	chrX:102746093-102753540	1	+	102748995	102750639	789624	4	81,112,95,4842,	0,1491,1723,2605,
#Partially deleted in new
chrX	102769217	102827144	chrX:102769217-102827144	0	+	102769217	102769217	8553170	4	124,91,177,176,	0,47774,56775,57751,
#Partially deleted in new
chrX	102785666	102786604	chrX:102785666-102786604	7	+	102785666	102785666	16724991	1	938,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	102786812	102788387	chrX:102786812-102788387	7	+	102786812	102786812	16724991	2	385,560,	0,1015,
#Partially deleted in new
chrX	102796250	102797093	chrX:102796250-102797093	7	+	102796250	102796250	16724991	2	240,260,	0,583,
#Partially deleted in new
chrX	102797530	102798128	chrX:102797530-102798128	7	+	102797530	102797530	16724991	1	598,	0,
#Partially deleted in new
chrX	102798395	102799560	chrX:102798395-102799560	7	+	102798395	102798395	16724991	2	567,92,	0,1073,
#Partially deleted in new
chrX	102799562	102799883	chrX:102799562-102799883	7	+	102799562	102799562	16724991	1	321,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	102799941	102801399	chrX:102799941-102801399	7	+	102799941	102799941	16724991	2	1150,87,	0,1371,
#Partially deleted in new
chrX	102803040	102806138	chrX:102803040-102806138	7	+	102803040	102803040	16724991	2	245,1507,	0,1591,
#Partially deleted in new
chrX	102806163	102806646	chrX:102806163-102806646	7	-	102806163	102806163	16724991	1	483,	0,
#Partially deleted in new
chrX	102806740	102807824	chrX:102806740-102807824	7	+	102806740	102806740	16724991	1	1084,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	102839907	102866824	chrX:102839907-102866824	1	+	102839907	102839907	8553170	3	65,164,1783,	0,5949,25134,
#Partially deleted in new
chrX	102884413	102906158	chrX:102884413-102906158	3	+	102884413	102884413	8553170	6	109,191,83,111,141,498,	0,13160,16336,16609,17217,21247,
#Partially deleted in new
chrX	102897580	102905691	chrX:102897580-102905691	0	+	102897580	102897580	8553170	4	184,83,141,31,	0,3169,4050,8080,
#Deleted in new
chrX	102937271	102938300	chrX:102937271-102938300	3	+	102937318	102938155	789624	1	1029,	0,
#Deleted in new
chrX	102937769	102940561	chrX:102937769-102940561	3	-	102937769	102937769	8553170	2	537,91,	0,2701,
#Deleted in new
chrX	103007460	103008072	chrX:103007460-103008072	7	+	103007460	103007460	16724991	1	612,	0,
#Deleted in new
chrX	103062650	103064240	chrX:103062650-103064240	3	-	103062896	103063274	789624	3	629,90,145,	0,991,1445,
#Partially deleted in new
chrX	103075809	103093125	chrX:103075809-103093125	3	-	103076289	103093023	789624	20	191,61,133,73,43,116,59,108,56,69,37,110,89,70,81,105,84,154,169,130,	0,431,1804,2750,3411,3549,3774,3953,4203,4338,4766,6445,6950,7194,7383,7588,7799,8532,8905,17186,
#Partially deleted in new
chrX	103075823	103081735	chrX:103075823-103081735	0	-	103075823	103075823	8553170	9	177,61,133,73,43,116,59,454,1160,	0,417,1790,2736,3397,3535,3760,3939,4752,
#Partially deleted in new
chrX	103076275	103079727	chrX:103076275-103079727	0	-	103076275	103076275	8553170	6	26,133,73,43,116,144,	0,1338,2284,2945,3083,3308,
#Partially deleted in new
chrX	103077674	103080148	chrX:103077674-103080148	0	-	103077674	103077674	8553170	7	72,73,43,116,59,108,136,	0,885,1546,1684,1909,2088,2338,
#Partially deleted in new
chrX	103077734	103083672	chrX:103077734-103083672	0	-	103077734	103083672	789624	15	12,62,43,116,59,108,56,69,37,110,89,70,81,105,64,	0,825,1486,1624,1849,2028,2278,2413,2841,4520,5025,5269,5458,5663,5874,
#Deleted in new
chrX	103079382	103080734	chrX:103079382-103080734	0	-	103079382	103079382	8553170	6	92,59,108,56,69,159,	0,201,380,630,765,1193,
#Deleted in new
chrX	103082095	103083480	chrX:103082095-103083480	0	-	103082095	103082095	8553170	5	269,89,70,81,83,	0,664,908,1097,1302,
#Deleted in new
chrX	103087197	103089277	chrX:103087197-103089277	7	+	103087197	103087197	16724991	1	2080,	0,
#Deleted in new
chrX	103206009	103206899	chrX:103206009-103206899	7	-	103206009	103206009	16724991	1	890,	0,
#Deleted in new
chrX	103215091	103217246	chrX:103215091-103217246	3	+	103216153	103216516	789624	3	147,83,1098,	0,590,1057,
#Deleted in new
chrX	103215123	103217099	chrX:103215123-103217099	1	+	103216153	103216516	789624	2	115,951,	0,1025,
#Deleted in new
chrX	103252994	103255185	chrX:103252994-103255185	1	-	103253625	103253979	789624	2	1023,108,	0,2083,
#Deleted in new
chrX	103252994	103255203	chrX:103252994-103255203	3	-	103253625	103253979	789624	3	1023,73,126,	0,1610,2083,
#Deleted in new
chrX	103253657	103255192	chrX:103253657-103255192	0	-	103253657	103253979	789624	4	133,128,73,115,	0,232,947,1420,
#Deleted in new
chrX	103258571	103259581	chrX:103258571-103259581	7	-	103258571	103258571	16724991	2	747,94,	0,916,
#Deleted in new
chrX	103273690	103276872	chrX:103273690-103276872	3	-	103273942	103274563	789624	3	900,68,200,	0,1584,2982,
#Deleted in new
chrX	103309345	103311046	chrX:103309345-103311046	3	-	103309589	103309976	789624	3	636,76,187,	0,1012,1514,
#Deleted in new
chrX	103309353	103310955	chrX:103309353-103310955	1	-	103309589	103310597	789624	3	628,76,373,	0,1004,1229,
#Deleted in new
chrX	103309501	103311007	chrX:103309501-103311007	1	-	103309589	103309976	789624	3	480,76,112,	0,856,1394,
#Deleted in new
chrX	103309671	103310935	chrX:103309671-103310935	0	-	103309671	103309976	789624	3	310,76,350,	0,686,914,
#Deleted in new
chrX	103330195	103332326	chrX:103330195-103332326	3	+	103331403	103331706	789624	3	109,118,950,	0,727,1181,
#Deleted in new
chrX	103330228	103332088	chrX:103330228-103332088	1	+	103331403	103331706	789624	3	76,64,712,	0,748,1148,
#Deleted in new
chrX	103347461	103347729	chrX:103347461-103347729	7	-	103347461	103347461	16724991	1	268,	0,
#Deleted in new
chrX	103356488	103358195	chrX:103356488-103358195	1	+	103357684	103357999	789624	2	118,581,	0,1126,
#Deleted in new
chrX	103356500	103358462	chrX:103356500-103358462	3	+	103357684	103357999	789624	3	106,79,848,	0,582,1114,
#Deleted in new
chrX	103356517	103358455	chrX:103356517-103358455	1	+	103357684	103357999	789624	1	1938,	0,
#Deleted in new
chrX	103376339	103378077	chrX:103376339-103378077	1	+	103377521	103377827	0	3	274,79,568,	0,688,1170,
#Deleted in new
chrX	103376394	103378077	chrX:103376394-103378077	3	+	103377491	103377827	0	3	219,79,615,	0,633,1068,
#Deleted in new
chrX	103376406	103378060	chrX:103376406-103378060	1	+	103377491	103377827	0	2	207,598,	0,1056,
#Deleted in new
chrX	103376915	103378071	chrX:103376915-103378071	1	+	103377521	103377827	0	2	191,562,	0,594,
#Partially deleted in new
chrX	103404776	103408299	chrX:103404776-103408299	3	+	103404776	103404776	8553170	2	320,142,	0,3381,
#Partially deleted in new
chrX	103404804	103408299	chrX:103404804-103408299	0	+	103404804	103404804	8553170	2	292,131,	0,3364,
#Partially deleted in new
chrX	103404817	103408299	chrX:103404817-103408299	0	+	103404817	103404817	8553170	2	206,142,	0,3340,
#Deleted in new
chrX	103497522	103500317	chrX:103497522-103500317	3	+	103497522	103497522	8553170	2	91,541,	0,2254,
#Partially deleted in new
chrX	103499129	103519489	chrX:103499129-103519489	3	-	103499922	103500756	789624	3	1697,152,120,	0,18244,20240,
#Deleted in new
chrX	103499749	103502875	chrX:103499749-103502875	1	-	103499922	103500756	789624	1	3126,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	103576230	103587518	chrX:103576230-103587518	1	+	103576469	103587323	789624	5	302,120,136,83,870,	0,863,9394,9988,10418,
#Deleted in new
chrX	103585491	103587518	chrX:103585491-103587518	1	+	103586675	103587323	789624	3	192,73,870,	0,727,1157,
#Deleted in new
chrX	103585504	103586499	chrX:103585504-103586499	0	+	103585504	103585504	8553170	2	120,281,	0,714,
#Deleted in new
chrX	103585512	103587736	chrX:103585512-103587736	3	+	103586675	103587323	789624	3	112,73,1088,	0,706,1136,
#Deleted in new
chrX	103585514	103587502	chrX:103585514-103587502	1	+	103586675	103587323	789624	2	110,849,	0,1139,
#Deleted in new
chrX	103585516	103587725	chrX:103585516-103587725	1	+	103586675	103587323	789624	4	108,73,208,777,	0,702,1137,1432,
#Deleted in new
chrX	103585522	103586905	chrX:103585522-103586905	0	+	103586675	103586905	789624	4	102,249,73,257,	0,336,696,1126,
#Deleted in new
chrX	103585527	103586949	chrX:103585527-103586949	0	+	103586675	103586949	789624	3	156,322,301,	0,442,1121,
#Deleted in new
chrX	103585532	103587694	chrX:103585532-103587694	1	+	103586675	103587323	789624	3	92,433,1046,	0,326,1116,
#Deleted in new
chrX	103585562	103587526	chrX:103585562-103587526	1	+	103586675	103587323	789624	3	62,73,873,	0,656,1091,
#Deleted in new
chrX	103585577	103586825	chrX:103585577-103586825	0	+	103586675	103586825	789624	2	714,177,	0,1071,
#Deleted in new
chrX	103585614	103586849	chrX:103585614-103586849	0	+	103586675	103586849	789624	3	69,73,196,	0,604,1039,
#Deleted in new
chrX	103586135	103587063	chrX:103586135-103587063	0	+	103586675	103587063	789624	2	156,410,	0,518,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	103596607	103598904	chrX:103596607-103598904	3	+	103596607	103596607	8553170	1	2297,	0,
#Deleted in new
chrX	103607450	103609927	chrX:103607450-103609927	3	+	103609064	103609667	789624	3	266,70,885,	0,1153,1592,
#Deleted in new
chrX	103607905	103609926	chrX:103607905-103609926	1	+	103609064	103609667	789624	3	165,70,889,	0,698,1132,
#Deleted in new
chrX	103607905	103609927	chrX:103607905-103609927	1	+	103609064	103609667	789624	3	153,70,890,	0,698,1132,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	103607970	103629690	chrX:103607970-103629690	0	+	103607970	103607970	8553170	7	88,70,97,118,114,388,197,	0,633,2540,17347,19070,20435,21523,
#Deleted in new
chrX	103626075	103626492	chrX:103626075-103626492	3	-	103626075	103626075	8553170	2	78,283,	0,134,
#Deleted in new
chrX	103628703	103630447	chrX:103628703-103630447	1	+	103629916	103630396	789624	3	90,68,563,	0,790,1181,
#Deleted in new
chrX	103628973	103630953	chrX:103628973-103630953	3	+	103629916	103630396	789624	3	52,80,1069,	0,520,911,
#Deleted in new
chrX	103628983	103630217	chrX:103628983-103630217	0	+	103628983	103628983	8553170	2	42,724,	0,510,
#Deleted in new
chrX	103628998	103630953	chrX:103628998-103630953	1	+	103629916	103630396	789624	3	27,68,1069,	0,495,886,
#Partially deleted in new
chrX	103651734	103652106	chrX:103651734-103652106	7	-	103651734	103651734	16724991	1	372,	0,
#Partially deleted in new
chrX	103675495	103688064	chrX:103675495-103688064	1	-	103676160	103677027	789624	4	1556,102,90,76,	0,3003,9675,12493,
#Partially deleted in new
chrX	103675499	103686818	chrX:103675499-103686818	1	-	103676160	103677027	789624	4	1552,153,90,188,	0,2999,9671,11131,
#Partially deleted in new
chrX	103675499	103688158	chrX:103675499-103688158	3	-	103676160	103677027	789624	4	1552,153,90,170,	0,2999,9671,12489,
#Partially deleted in new
chrX	103675499	103686818	chrX:103675499-103686818	1	-	103676160	103677027	789624	3	1552,90,188,	0,9671,11131,
#Partially deleted in new
chrX	103675504	103686668	chrX:103675504-103686668	1	-	103676160	103677027	789624	4	1547,153,90,38,	0,2994,9666,11126,
#Deleted in new
chrX	103676160	103676931	chrX:103676160-103676931	1	-	103676160	103676928	789624	2	658,59,	0,712,
#Partially deleted in new
chrX	103676693	103688122	chrX:103676693-103688122	0	-	103676693	103676693	8553170	3	358,90,134,	0,8477,11295,
#Partially deleted in new
chrX	103676915	103685505	chrX:103676915-103685505	0	-	103676915	103676915	8553170	3	136,102,335,	0,1583,8255,
#Partially deleted in new
chrX	103676978	103686684	chrX:103676978-103686684	0	-	103676978	103676978	8553170	4	73,153,90,54,	0,1520,8192,9652,
#Partially deleted in new
chrX	103676978	103686816	chrX:103676978-103686816	0	-	103676978	103676978	8553170	4	73,102,90,186,	0,1520,8192,9652,
#Deleted in new
chrX	103684973	103688027	chrX:103684973-103688027	0	-	103684973	103684973	8553170	2	287,39,	0,3015,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	103687283	103691772	chrX:103687283-103691772	3	+	103687283	103687283	789624	3	203,1529,354,	0,668,4135,
#Partially deleted in new
chrX	103707223	103728624	chrX:103707223-103728624	3	-	103707343	103728203	789624	9	291,150,215,141,83,224,68,131,492,	0,6296,11833,14928,16632,16854,17317,17674,20909,
#Partially deleted in new
chrX	103707299	103728655	chrX:103707299-103728655	0	-	103726614	103728203	789624	8	215,150,141,446,68,131,138,523,	0,6220,14852,16556,17241,17598,19241,20833,
#Partially deleted in new
chrX	103710908	103714028	chrX:103710908-103714028	3	+	103712258	103713998	789624	3	168,125,435,	0,1327,2685,
#Partially deleted in new
chrX	103718573	103728624	chrX:103718573-103728624	0	-	103718573	103718573	8553170	7	698,141,83,224,68,131,492,	0,3578,5282,5504,5967,6324,9559,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	103719513	103722211	chrX:103719513-103722211	0	-	103719513	103719513	8553170	2	136,60,	0,2638,
#Partially deleted in new
chrX	103773717	103786641	chrX:103773717-103786641	0	+	103776995	103786641	789624	5	129,146,147,187,177,	0,499,3135,11864,12747,
#Partially deleted in new
chrX	103774384	103786683	chrX:103774384-103786683	0	+	103776995	103786683	789624	4	71,147,187,219,	0,2468,11197,12080,
#Partially deleted in new
chrX	103775471	103786682	chrX:103775471-103786682	0	+	103776995	103786682	789624	4	28,147,187,218,	0,1381,10110,10993,
#Partially deleted in new
chrX	103775544	103786655	chrX:103775544-103786655	0	+	103776995	103786655	789624	4	63,147,187,191,	0,1308,10037,10920,
#Partially deleted in new
chrX	103776505	103786575	chrX:103776505-103786575	0	+	103776995	103786575	789624	4	142,147,187,111,	0,347,9076,9959,
#Partially deleted in new
chrX	103776510	103792616	chrX:103776510-103792616	3	+	103776995	103790598	0	8	137,147,187,262,169,74,66,2090,	0,342,9071,9954,11287,11926,12822,14016,
#Partially deleted in new
chrX	103776617	103786608	chrX:103776617-103786608	0	+	103776995	103786608	789624	4	130,147,187,144,	0,235,8964,9847,
#Partially deleted in new
chrX	103776849	103792619	chrX:103776849-103792619	1	+	103776995	103790598	0	7	150,187,157,169,74,66,2093,	0,8732,9615,10948,11587,12483,13677,
#Partially deleted in new
chrX	103776849	103792619	chrX:103776849-103792619	1	+	103776995	103790598	0	7	150,187,262,169,74,66,2093,	0,8732,9615,10948,11587,12483,13677,
#Partially deleted in new
chrX	103776873	103786583	chrX:103776873-103786583	0	+	103776873	103776873	8553170	4	126,142,187,119,	0,2975,8708,9591,
#Partially deleted in new
chrX	103776873	103786947	chrX:103776873-103786947	0	+	103776873	103776873	8553170	3	126,185,221,	0,8708,9853,
#Partially deleted in new
chrX	103776873	103786639	chrX:103776873-103786639	0	+	103776873	103776873	8553170	4	126,108,187,175,	0,3929,8708,9591,
#Partially deleted in new
chrX	103776916	103785977	chrX:103776916-103785977	0	+	103776916	103776916	8553170	2	83,396,	0,8665,
#Partially deleted in new
chrX	103776917	103786990	chrX:103776917-103786990	0	+	103776917	103776917	8553170	3	82,187,526,	0,8664,9547,
#Partially deleted in new
chrX	103779964	103786553	chrX:103779964-103786553	0	+	103779964	103779964	8553170	3	306,187,89,	0,5617,6500,
#Partially deleted in new
chrX	103781152	103787969	chrX:103781152-103787969	0	+	103781152	103781152	8553170	4	155,187,157,172,	0,4429,5312,6645,
#Deleted in new
chrX	103786034	103790593	chrX:103786034-103790593	0	+	103786034	103786034	8553170	6	33,157,169,74,66,67,	0,430,1763,2402,3298,4492,
#Deleted in new
chrX	103786060	103788460	chrX:103786060-103788460	0	+	103786060	103786060	8553170	4	172,262,169,24,	0,404,1737,2376,
#Deleted in new
chrX	103786062	103789385	chrX:103786062-103789385	0	+	103786062	103786062	8553170	5	107,157,169,74,53,	0,402,1735,2374,3270,
#Deleted in new
chrX	103786062	103786837	chrX:103786062-103786837	0	+	103786062	103786062	8553170	2	170,373,	0,402,
#Deleted in new
chrX	103787508	103790789	chrX:103787508-103790789	0	+	103787508	103787508	8553170	4	458,74,66,263,	0,928,1824,3018,
#Deleted in new
chrX	103787798	103788834	chrX:103787798-103788834	0	+	103787798	103787798	8553170	2	168,398,	0,638,
#Deleted in new
chrX	103788906	103790582	chrX:103788906-103790582	0	+	103788906	103788906	8553170	2	492,56,	0,1620,
#Partially deleted in new
chrX	103822321	103832228	chrX:103822321-103832228	3	-	103825178	103825784	0	3	3505,74,169,	0,4683,9738,
#Deleted in new
chrX	103850796	103850911	chrX:103850796-103850911	7	-	103850796	103850796	16724991	1	115,	0,
#Deleted in new
chrX	103904321	103904754	chrX:103904321-103904754	7	-	103904321	103904321	16724991	1	433,	0,
#Deleted in new
chrX	103909125	103909449	chrX:103909125-103909449	7	+	103909125	103909125	16724991	1	324,	0,
#Deleted in new
chrX	103910304	103911352	chrX:103910304-103911352	7	-	103910304	103910304	16724991	1	1048,	0,
#Deleted in new
chrX	103917410	103919548	chrX:103917410-103919548	3	-	103917410	103917410	789624	4	815,52,249,124,	0,998,1421,2014,
#Deleted in new
chrX	103918760	103919479	chrX:103918760-103919479	0	-	103918760	103918760	8553170	2	142,55,	0,664,
#Partially deleted in new
chrX	103918895	103965987	chrX:103918895-103965987	3	+	103964522	103965576	789624	4	397,703,117,449,	0,43125,45610,46643,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	103919186	103932911	chrX:103919186-103932911	0	+	103919186	103919186	8553170	2	106,1896,	0,11829,
#Deleted in new
chrX	103928098	103929017	chrX:103928098-103929017	7	+	103928098	103928098	16724991	1	919,	0,
#Deleted in new
chrX	103961810	103962279	chrX:103961810-103962279	7	-	103961810	103961810	16724991	1	469,	0,
#Partially deleted in new
chrX	103962626	103965989	chrX:103962626-103965989	1	+	103964522	103965576	789624	3	97,117,451,	0,1879,2912,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	103962640	103966712	chrX:103962640-103966712	1	+	103964522	103966360	789624	3	83,117,390,	0,1865,3682,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	103962668	103965981	chrX:103962668-103965981	1	+	103964522	103965576	789624	3	1626,117,443,	0,1837,2870,
#Deleted in new
chrX	104011146	104013687	chrX:104011146-104013687	3	-	104012711	104013660	789624	3	317,59,518,	0,1543,2023,
#Deleted in new
chrX	104012711	104013660	chrX:104012711-104013660	1	-	104012711	104013660	789624	2	37,491,	0,458,
#Partially deleted in new
chrX	104039948	104042454	chrX:104039948-104042454	3	+	104039976	104040864	789624	3	456,59,1367,	0,879,1139,
#Partially deleted in new
chrX	104039976	104040864	chrX:104039976-104040864	1	+	104039976	104040864	789624	2	428,37,	0,851,
#Partially deleted in new
chrX	104040282	104042454	chrX:104040282-104042454	0	+	104040282	104040864	789624	3	122,59,343,	0,545,1829,
#Deleted in new
chrX	104062541	104063037	chrX:104062541-104063037	7	-	104062541	104062541	16724991	1	496,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	104063870	104076194	chrX:104063870-104076194	1	-	104065841	104074340	789624	3	2114,117,55,	0,10370,12269,
#Partially deleted in new
chrX	104072567	104076212	chrX:104072567-104076212	3	-	104073286	104074340	8553170	3	757,117,73,	0,1673,3572,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	104099213	104157027	chrX:104099213-104157027	3	-	104104333	104105257	789624	2	6075,150,	0,57664,
#Deleted in new
chrX	104112130	104112872	chrX:104112130-104112872	0	+	104112130	104112130	8553170	2	53,142,	0,600,
#Deleted in new
chrX	104112510	104115604	chrX:104112510-104115604	1	+	104114111	104115323	789624	2	736,2171,	0,923,
#Deleted in new
chrX	104112525	104115846	chrX:104112525-104115846	3	+	104114111	104115323	789624	3	476,52,2413,	0,669,908,
#Deleted in new
chrX	104112543	104115842	chrX:104112543-104115842	0	+	104112543	104112543	789624	4	458,52,140,591,	0,651,890,2708,
#Deleted in new
chrX	104112886	104113640	chrX:104112886-104113640	0	+	104112886	104112886	8553170	2	115,446,	0,308,
#Deleted in new
chrX	104112888	104113580	chrX:104112888-104113580	0	+	104112888	104112888	8553170	3	113,52,147,	0,306,545,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	104130603	104156988	chrX:104130603-104156988	0	-	104130603	104130603	8553170	2	620,111,	0,26274,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	104166619	104195902	chrX:104166619-104195902	3	+	104166785	104189778	789624	6	363,220,150,162,267,6295,	0,9003,19446,19840,21420,22988,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	104186117	104191446	chrX:104186117-104191446	0	+	104186117	104186117	8553170	4	98,162,138,1839,	0,342,1922,3490,
#Partially deleted in new
chrX	104250037	104254933	chrX:104250037-104254933	3	-	104250227	104254849	789624	4	859,46,424,166,	0,2745,4116,4730,
#Partially deleted in new
chrX	104566314	105767829	chrX:104566314-105767829	3	+	104658913	105767661	789624	11	737,101,274,187,154,75,130,146,144,171,866,	0,92580,629160,667503,701073,917998,1151052,1174231,1182645,1188862,1200649,
#Deleted in new
chrX	104647215	104647999	chrX:104647215-104647999	7	-	104647215	104647215	16724991	1	784,	0,
#Deleted in new
chrX	104803914	104804440	chrX:104803914-104804440	7	+	104803914	104803914	16724991	1	526,	0,
#Deleted in new
chrX	105218928	105220674	chrX:105218928-105220674	3	-	105218963	105220397	789624	3	830,467,80,	0,1034,1666,
#Deleted in new
chrX	105218930	105220674	chrX:105218930-105220674	1	-	105218963	105220397	789624	3	828,441,80,	0,1032,1664,
#Deleted in new
chrX	105405646	105407039	chrX:105405646-105407039	7	+	105405646	105405646	16724991	4	48,263,350,352,	0,151,542,1041,
#Partially deleted in new
chrX	105717365	105767661	chrX:105717365-105767661	1	+	105717365	105767661	789624	5	131,146,144,171,698,	0,23180,31594,37811,49598,
#Partially deleted in new
chrX	105740648	105765345	chrX:105740648-105765345	0	+	105740648	105740648	8553170	4	43,144,171,161,	0,8311,14528,24536,
#Partially deleted in new
chrX	105822542	105958610	chrX:105822542-105958610	3	+	105822845	105955600	789624	29	360,66,57,72,126,111,91,131,55,79,176,64,1156,108,68,95,98,365,337,187,156,144,159,101,144,150,160,140,3106,	0,8511,57656,59165,65751,71289,72890,76041,78075,82722,83871,85697,86184,90105,93187,95035,99421,100575,102152,111715,112627,114896,117331,121398,123329,123772,127032,130491,132962,
#Partially deleted in new
chrX	105822552	105895363	chrX:105822552-105895363	1	+	105822845	105895315	789624	7	350,66,57,72,126,111,126,	0,8501,57646,59155,65741,71279,72685,
#Boundary problem: need 23, got 0, diff 23, mapped 0.0
chrX	105822580	105939947	chrX:105822580-105939947	0	+	105822845	105907223	789624	23	322,66,57,72,126,111,91,131,55,79,176,1127,1156,108,68,95,98,365,337,187,156,144,74,	0,8473,57618,59127,65713,71251,72852,76003,78037,82684,83833,84596,86146,90067,93149,94997,99383,100537,102114,111677,112589,114858,117293,
#Partially deleted in new
chrX	105948437	105956593	chrX:105948437-105956593	1	+	105948639	105955600	789624	4	322,136,140,1089,	0,1161,4596,7067,
#Deleted in new
chrX	106032441	106037394	chrX:106032441-106037394	1	-	106033499	106037058	0	4	1262,148,274,958,	0,1793,2670,3995,
#Deleted in new
chrX	106033205	106038738	chrX:106033205-106038738	3	-	106033499	106037058	0	5	498,148,274,639,41,	0,1029,1906,3231,5492,
#Deleted in new
chrX	106033686	106035280	chrX:106033686-106035280	0	-	106033686	106033686	8553170	3	78,148,169,	0,548,1425,
#Partially deleted in new
chrX	106070480	106073202	chrX:106070480-106073202	7	+	106070480	106070480	16724991	2	742,511,	0,2211,
#Partially deleted in new
chrX	106168304	106208955	chrX:106168304-106208955	1	+	106205432	106207523	789624	5	121,128,136,186,3737,	0,2707,8919,35680,36914,
#Partially deleted in new
chrX	106168304	106208956	chrX:106168304-106208956	3	+	106205432	106207523	789624	4	121,128,186,3738,	0,2707,35680,36914,
#Deleted in new
chrX	106201735	106208955	chrX:106201735-106208955	1	+	106205432	106207523	789624	3	34,186,3737,	0,2249,3483,
#Deleted in new
chrX	106327533	106327824	chrX:106327533-106327824	7	+	106327533	106327533	16724991	1	291,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	106426567	106426669	chrX:106426567-106426669	3	+	106426567	106426567	8553170	1	102,	0,
#Deleted in new
chrX	106466541	106467440	chrX:106466541-106467440	7	-	106466541	106466541	16724991	1	899,	0,
#Partially deleted in new
chrX	106562773	106563404	chrX:106562773-106563404	7	-	106562773	106562773	16724991	1	631,	0,
#Partially deleted in new
chrX	106566020	106566161	chrX:106566020-106566161	7	+	106566020	106566020	16724991	1	141,	0,
#Partially deleted in new
chrX	106611929	106679437	chrX:106611929-106679437	1	+	106612080	106678258	789624	13	794,143,193,109,92,123,105,35,170,74,291,168,1310,	0,10721,13160,20695,21002,21200,24613,25830,28622,36383,50085,57233,66198,
#Partially deleted in new
chrX	106611971	106679442	chrX:106611971-106679442	3	+	106612080	106678258	789624	14	752,143,193,109,92,123,105,165,161,170,74,291,168,1315,	0,10679,13118,20653,20960,21158,24571,25788,27555,28580,36341,50043,57191,66156,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	106611974	106638678	chrX:106611974-106638678	0	+	106612080	106638055	789624	9	749,143,193,109,92,123,105,646,139,	0,10676,13115,20650,20957,21155,24568,25785,26565,
#Partially deleted in new
chrX	106612656	106679437	chrX:106612656-106679437	0	+	106612656	106678258	789624	13	67,143,193,109,92,123,105,35,170,74,291,168,1310,	0,9994,12433,19968,20275,20473,23886,25103,27895,35656,49358,56506,65471,
#Partially deleted in new
chrX	106639293	106640582	chrX:106639293-106640582	0	+	106639293	106639293	8553170	2	394,31,	0,1258,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	106639813	106639896	chrX:106639813-106639896	3	+	106639813	106639813	5263520	1	83,	0,
#Partially deleted in new
chrX	106640454	106669212	chrX:106640454-106669212	0	+	106640454	106640454	8553170	4	267,74,291,50,	0,7858,21560,28708,
#Partially deleted in new
chrX	106693793	106790205	chrX:106693793-106790205	0	+	106694083	106790205	789624	6	80,336,248,72,83,20,	0,279,79119,91271,94124,96392,
#Partially deleted in new
chrX	106693837	106796993	chrX:106693837-106796993	1	+	106694002	106795713	0	7	571,248,72,83,97,169,1414,	0,79075,91227,94080,96348,97228,101742,
#Partially deleted in new
chrX	106726663	106796993	chrX:106726663-106796993	3	+	106726913	106795713	0	7	734,248,72,83,97,169,1414,	0,46249,58401,61254,63522,64402,68916,
#Partially deleted in new
chrX	106802679	106876145	chrX:106802679-106876145	3	+	106802853	106873965	789624	21	304,111,119,226,241,208,168,150,151,215,118,286,130,99,69,241,66,84,57,98,2576,	0,15983,18197,19297,20546,23350,24490,36628,37368,37990,45506,47345,50841,51518,62879,63113,64117,65713,66805,68036,70890,
#Partially deleted in new
chrX	106802688	106849831	chrX:106802688-106849831	1	+	106802853	106849306	789624	12	295,111,119,226,241,208,168,150,151,215,118,587,	0,15974,18188,19288,20537,23341,24481,36619,37359,37981,45497,46556,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	106802704	106830083	chrX:106802704-106830083	1	+	106802853	106827394	789624	7	279,111,119,226,241,208,2914,	0,15958,18172,19272,20521,23325,24465,
#Partially deleted in new
chrX	106802812	106874117	chrX:106802812-106874117	1	+	106802853	106873965	789624	21	171,111,119,226,241,208,168,132,151,215,118,286,130,99,69,241,66,84,57,98,548,	0,15850,18064,19164,20413,23217,24357,36513,37235,37857,45373,47212,50708,51385,62746,62980,63984,65580,66672,67903,70757,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	106813870	106993340	chrX:106813870-106993340	0	-	106815782	106993340	789624	2	1916,111,	0,179359,
#Deleted in new
chrX	106818396	106820995	chrX:106818396-106820995	0	+	106820929	106820995	789624	2	377,119,	0,2480,
#Partially deleted in new
chrX	106853511	106869539	chrX:106853511-106869539	0	+	106853511	106869539	789624	6	139,69,241,66,84,55,	0,12047,12281,13285,14881,15973,
#Deleted in new
chrX	106865545	106866862	chrX:106865545-106866862	0	+	106865545	106865545	8553170	2	488,66,	0,1251,
#Deleted in new
chrX	106900062	106903317	chrX:106900062-106903317	3	-	106900748	106903287	789624	4	846,65,76,185,	0,1411,2077,3070,
#Partially deleted in new
chrX	106900163	106930859	chrX:106900163-106930859	3	+	106928228	106928921	0	2	341,2809,	0,27887,
#Deleted in new
chrX	106900325	106903335	chrX:106900325-106903335	1	-	106900748	106903287	789624	2	583,203,	0,2807,
#Partially deleted in new
chrX	106918359	106930859	chrX:106918359-106930859	1	+	106928228	106928921	0	2	110,2809,	0,9691,
#Partially deleted in new
chrX	106920403	106930861	chrX:106920403-106930861	1	+	106928228	106928921	0	2	148,2811,	0,7647,
#Partially deleted in new
chrX	106940733	107000244	chrX:106940733-107000244	3	-	106941478	106999969	789624	17	899,284,691,176,55,69,129,99,101,120,129,133,148,218,133,73,377,	0,1204,1781,14179,15746,16202,17602,21278,35850,37346,40157,40611,44362,45249,52496,58943,59134,
#Partially deleted in new
chrX	106941423	107000078	chrX:106941423-107000078	1	-	106941551	106999969	789624	17	209,246,691,176,55,69,129,99,101,120,129,133,148,218,133,73,211,	0,552,1091,13489,15056,15512,16912,20588,35160,36656,39467,39921,43672,44559,51806,58253,58444,
#Deleted in new
chrX	106941463	106942584	chrX:106941463-106942584	0	-	106941463	106941463	8553170	2	758,70,	0,1051,
#Deleted in new
chrX	107032247	107032820	chrX:107032247-107032820	7	+	107032247	107032247	16724991	1	573,	0,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	107064419	107118800	chrX:107064419-107118800	1	-	107065753	107118773	0	8	1339,138,148,404,205,193,117,35,	0,3136,4835,24016,50932,51442,52230,54346,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	107066299	107118823	chrX:107066299-107118823	0	-	107070189	107118773	0	8	1394,1171,105,72,205,193,117,58,	0,2955,22435,47097,49052,49562,50350,52466,
#Deleted in new
chrX	107066644	107069277	chrX:107066644-107069277	0	-	107066644	107066644	8553170	3	171,138,23,	0,911,2610,
#Partially deleted in new
chrX	107067137	107118804	chrX:107067137-107118804	3	-	107067526	107118773	0	7	556,148,404,205,193,117,39,	0,2117,21298,48214,48724,49512,51628,
#Partially deleted in new
chrX	107069309	107116766	chrX:107069309-107116766	0	-	107069379	107116766	789624	5	93,72,205,193,117,	0,44087,46042,46552,47340,
#Partially deleted in new
chrX	107088435	107115454	chrX:107088435-107115454	0	-	107088435	107088435	8553170	3	138,105,103,	0,299,26916,
#Partially deleted in new
chrX	107088525	107116768	chrX:107088525-107116768	0	-	107088525	107088525	8553170	5	314,205,193,94,119,	0,26826,27336,27625,28124,
#Partially deleted in new
chrX	107114299	107116766	chrX:107114299-107116766	0	-	107114299	107114299	8553170	3	1257,193,117,	0,1562,2350,
#Partially deleted in new
chrX	107123426	107206433	chrX:107123426-107206433	3	-	107147784	107175146	789624	9	906,67,135,50,151,136,105,44,161,	0,24316,29745,30027,30669,44222,51662,69602,82846,
#Partially deleted in new
chrX	107123471	107206433	chrX:107123471-107206433	0	-	107153478	107175146	789624	7	861,67,135,50,136,105,161,	0,24271,29700,29982,44177,51617,82801,
#Partially deleted in new
chrX	107124147	107154234	chrX:107124147-107154234	0	-	107124240	107154234	789624	6	185,67,112,135,50,139,	0,23595,26708,29024,29306,29948,
#Deleted in new
chrX	107131658	107132269	chrX:107131658-107132269	7	+	107131658	107131658	16724991	1	611,	0,
#Partially deleted in new
chrX	107153291	107206433	chrX:107153291-107206433	0	-	107153291	107175146	789624	6	15,50,151,136,105,161,	0,162,804,14357,21797,52981,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	107202576	107202683	chrX:107202576-107202683	3	+	107202576	107202576	8553170	1	107,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	107206631	107244243	chrX:107206631-107244243	3	+	107212875	107243298	789624	7	59,156,73,106,97,86,1075,	0,6241,10039,12232,16113,32290,36537,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	107206631	107244242	chrX:107206631-107244242	1	+	107212875	107243298	789624	8	59,275,156,73,106,97,86,1074,	0,516,6241,10039,12232,16113,32290,36537,
#Partially deleted in new
chrX	107207147	107243364	chrX:107207147-107243364	1	+	107212875	107243298	789624	7	279,156,73,106,97,86,196,	0,5725,9523,11716,15597,31774,36021,
#Deleted in new
chrX	107272581	107273656	chrX:107272581-107273656	7	+	107272581	107272581	16724991	1	1075,	0,
#Deleted in new
chrX	107351649	107352843	chrX:107351649-107352843	7	-	107351649	107351649	16724991	1	1194,	0,
#Deleted in new
chrX	107428629	107429461	chrX:107428629-107429461	7	+	107428629	107428629	16724991	1	832,	0,
#Partially deleted in new
chrX	107512982	107545821	chrX:107512982-107545821	3	-	107512982	107512982	789624	2	350,107,	0,32732,
#Partially deleted in new
chrX	107522449	107605244	chrX:107522449-107605244	3	+	107522449	107603373	789624	16	34,58,155,103,46,105,108,132,120,137,127,90,180,145,822,4942,	0,3145,4132,7959,11055,23287,27599,30345,31935,37807,38277,40661,42437,53865,74871,77853,
#Partially deleted in new
chrX	107526645	107605251	chrX:107526645-107605251	0	+	107526645	107603373	789624	14	91,103,46,105,108,132,120,137,127,90,180,145,822,4949,	0,3763,6859,19091,23403,26149,27739,33611,34081,36465,38241,49669,70675,73657,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	107544582	107555197	chrX:107544582-107555197	0	+	107544582	107544582	8553170	4	1259,108,132,813,	0,5466,8212,9802,
#Partially deleted in new
chrX	107628423	107651026	chrX:107628423-107651026	1	+	107645258	107650032	789624	4	327,174,160,1087,	0,16753,19182,21516,
#Partially deleted in new
chrX	107628427	107651026	chrX:107628427-107651026	3	+	107628628	107650032	0	7	323,184,99,125,174,160,1087,	0,10867,12474,13938,16749,19178,21512,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	107628484	107640911	chrX:107628484-107640911	0	+	107628628	107636588	789624	4	266,92,184,10,	0,8103,10810,12417,
#Partially deleted in new
chrX	107628495	107651025	chrX:107628495-107651025	1	+	107628628	107650742	789624	7	255,184,99,125,174,97,448,	0,10799,12406,13870,16681,19110,22082,
#Partially deleted in new
chrX	107628509	107650469	chrX:107628509-107650469	1	+	107628628	107650032	789624	6	241,184,125,174,160,530,	0,10785,13856,16667,19096,21430,
#Partially deleted in new
chrX	107628509	107650879	chrX:107628509-107650879	0	+	107628628	107645177	789624	4	241,174,160,940,	0,16667,19096,21430,
#Deleted in new
chrX	107628509	107630219	chrX:107628509-107630219	1	+	107628628	107630017	789624	2	241,203,	0,1507,
#Partially deleted in new
chrX	107628529	107641124	chrX:107628529-107641124	1	+	107628628	107641102	789624	3	221,184,223,	0,10765,12372,
#Partially deleted in new
chrX	107628534	107642538	chrX:107628534-107642538	0	+	107628534	107628534	8553170	4	216,184,99,173,	0,10760,12367,13831,
#Partially deleted in new
chrX	107713220	107775985	chrX:107713220-107775985	1	-	107714518	107775419	789624	4	1529,52,426,206,	0,2678,61879,62559,
#Deleted in new
chrX	107713220	107716545	chrX:107713220-107716545	1	-	107714518	107715901	789624	3	1529,52,231,	0,2678,3094,
#Deleted in new
chrX	107713220	107717135	chrX:107713220-107717135	1	-	107714518	107716811	789624	3	1529,52,446,	0,2678,3469,
#Partially deleted in new
chrX	107713223	107775787	chrX:107713223-107775787	1	-	107714518	107775419	789624	3	1526,52,688,	0,2675,61876,
#Partially deleted in new
chrX	107713223	107775988	chrX:107713223-107775988	3	-	107714518	107775419	789624	4	1526,52,412,209,	0,2675,61876,62556,
#Partially deleted in new
chrX	107713999	107722272	chrX:107713999-107722272	1	-	107714518	107721908	789624	3	750,52,414,	0,1899,7859,
#Partially deleted in new
chrX	107714369	107777067	chrX:107714369-107777067	1	-	107714518	107775419	789624	4	380,52,426,98,	0,1529,60730,62600,
#Partially deleted in new
chrX	107714486	107777078	chrX:107714486-107777078	1	-	107714518	107775215	789624	4	263,52,195,59,	0,1412,60613,62533,
#Deleted in new
chrX	107714676	107716401	chrX:107714676-107716401	0	-	107714676	107715901	789624	2	73,503,	0,1222,
#Deleted in new
chrX	107715772	107717062	chrX:107715772-107717062	0	-	107715772	107716811	789624	2	178,373,	0,917,
#Partially deleted in new
chrX	107715897	107777342	chrX:107715897-107777342	0	-	107715897	107775419	789624	3	53,426,323,	0,59202,61122,
#Partially deleted in new
chrX	107715902	107777055	chrX:107715902-107777055	0	-	107715902	107775419	789624	3	48,412,86,	0,59197,61067,
#Partially deleted in new
chrX	107715911	107776714	chrX:107715911-107776714	0	-	107715911	107775419	789624	3	39,426,116,	0,59188,60687,
#Partially deleted in new
chrX	107715922	107776115	chrX:107715922-107776115	0	-	107715922	107775419	789624	3	28,426,113,	0,59177,60080,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	107774898	107795829	chrX:107774898-107795829	3	+	107794220	107794682	789624	2	272,1681,	0,19250,
#Deleted in new
chrX	107775117	107776258	chrX:107775117-107776258	0	-	107775117	107775419	789624	2	408,113,	0,1028,
#Deleted in new
chrX	107775166	107777337	chrX:107775166-107777337	0	-	107775166	107775419	789624	2	359,66,	0,2105,
#Deleted in new
chrX	107775245	107777329	chrX:107775245-107777329	0	-	107775245	107775419	789624	3	280,165,58,	0,1774,2026,
#Partially deleted in new
chrX	107777732	107794682	chrX:107777732-107794682	1	+	107794220	107794682	789624	2	126,534,	0,16416,
#Partially deleted in new
chrX	107825754	107841381	chrX:107825754-107841381	0	+	107840725	107841381	789624	2	46,712,	0,14915,
#Partially deleted in new
chrX	107825878	107927193	chrX:107825878-107927193	1	+	107826426	107927073	0	10	552,716,96,108,149,128,234,162,208,523,	0,14791,28730,78079,79599,90123,91627,98464,100215,100792,
#Partially deleted in new
chrX	107826413	107927193	chrX:107826413-107927193	3	+	107826426	107927073	0	10	17,716,96,108,149,128,144,162,208,523,	0,14256,28195,77544,79064,89588,91092,97929,99680,100257,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	107894596	107935980	chrX:107894596-107935980	3	-	107894596	107894596	789624	4	1764,91,46,189,	0,38433,40038,41195,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	107901144	107901246	chrX:107901144-107901246	3	-	107901144	107901144	8553170	1	102,	0,
#Partially deleted in new
chrX	107917501	107926472	chrX:107917501-107926472	0	+	107917501	107917501	8553170	3	148,162,379,	0,6841,8592,
#Deleted in new
chrX	107939262	107939642	chrX:107939262-107939642	7	-	107939262	107939262	16724991	1	380,	0,
#Partially deleted in new
chrX	107974077	107985008	chrX:107974077-107985008	7	+	107974077	107974077	16724991	3	1472,171,142,	0,10460,10789,
#Deleted in new
chrX	107980863	107982370	chrX:107980863-107982370	3	-	107981079	107982127	789624	3	696,491,61,	0,805,1446,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	108044969	108079184	chrX:108044969-108079184	1	+	108045130	108077381	789624	8	210,164,108,199,156,120,142,2137,	0,13068,16458,21966,27707,28280,31107,32078,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	108045013	108079097	chrX:108045013-108079097	3	+	108045130	108077381	789624	7	166,164,199,156,120,142,2050,	0,13024,21922,27663,28236,31063,32034,
#Partially deleted in new
chrX	108045064	108067118	chrX:108045064-108067118	0	+	108045130	108067118	789624	4	115,164,108,183,	0,12973,16363,21871,
#Partially deleted in new
chrX	108064738	108073264	chrX:108064738-108073264	0	+	108064738	108064738	8553170	4	49,199,156,15,	0,2197,7938,8511,
#Deleted in new
chrX	108072795	108073853	chrX:108072795-108073853	0	+	108072795	108072795	8553170	2	37,604,	0,454,
#Partially deleted in new
chrX	108084206	108091618	chrX:108084206-108091618	3	-	108084973	108091520	0	5	921,167,147,99,212,	0,3479,3746,4545,7200,
#Partially deleted in new
chrX	108084596	108091542	chrX:108084596-108091542	1	-	108085119	108091520	789624	6	531,88,20,4,99,136,	0,3168,3356,3499,4155,6810,
#Partially deleted in new
chrX	108084774	108091542	chrX:108084774-108091542	1	-	108084973	108091520	789624	6	353,167,20,4,99,136,	0,2911,3178,3321,3977,6632,
#Partially deleted in new
chrX	108084829	108091542	chrX:108084829-108091542	1	-	108085119	108091520	0	5	298,88,147,99,136,	0,2935,3123,3922,6577,
#Partially deleted in new
chrX	108084842	108091520	chrX:108084842-108091520	1	-	108084973	108091520	789624	4	285,167,147,114,	0,2843,3110,6564,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	108087044	108091538	chrX:108087044-108091538	0	-	108087044	108087044	8553170	3	808,99,132,	0,1707,4362,
#Partially deleted in new
chrX	108088479	108091549	chrX:108088479-108091549	0	-	108088479	108088479	8553170	2	371,143,	0,2927,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	108091667	108154671	chrX:108091667-108154671	1	+	108091826	108153712	0	12	169,111,72,99,102,73,80,81,146,57,109,1030,	0,34409,37113,39592,42389,42671,45423,46136,58484,60134,61311,61974,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrX	108091667	108154671	chrX:108091667-108154671	3	+	108091826	108153712	0	13	169,111,72,99,102,73,80,188,79,146,57,109,1030,	0,34409,37113,39592,42389,42671,45423,46136,46445,58484,60134,61311,61974,
#Partially deleted in new
chrX	108091768	108150175	chrX:108091768-108150175	0	+	108131297	108150175	789624	10	111,111,72,99,102,73,80,188,79,24,	0,34308,37012,39491,42288,42570,45322,46035,46344,58383,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chrX	108091783	108154671	chrX:108091783-108154671	0	+	108091826	108126815	789624	14	53,111,302,72,99,102,73,80,188,79,146,57,109,1030,	0,34293,35009,36997,39476,42273,42555,45307,46020,46329,58368,60018,61195,61858,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	108091809	108154671	chrX:108091809-108154671	0	+	108091826	108150265	789624	10	27,111,72,99,102,188,146,57,109,1030,	0,34267,36971,39450,42247,45994,58342,59992,61169,61832,
#Partially deleted in new
chrX	108126076	108151858	chrX:108126076-108151858	0	+	108126076	108151858	789624	9	111,99,102,73,80,188,79,146,57,	0,5183,7980,8262,11014,11727,12036,24075,25725,
#Partially deleted in new
chrX	108150031	108153010	chrX:108150031-108153010	0	+	108150031	108150031	8553170	3	266,204,32,	0,1770,2947,
#Partially deleted in new
chrX	108150067	108153868	chrX:108150067-108153868	0	+	108150067	108150067	8553170	4	230,57,109,227,	0,1734,2911,3574,
#Partially deleted in new
chrX	108155606	108438430	chrX:108155606-108438430	1	-	108156999	108438196	789624	45	1654,287,192,117,147,99,162,117,126,72,108,108,75,64,182,126,144,171,162,222,108,72,184,180,161,105,141,108,70,54,45,69,54,93,42,36,63,36,69,117,45,135,81,52,245,	0,3855,4856,6012,7285,8993,9270,9763,13888,14338,15002,15203,15780,16862,18833,19483,20047,21234,23077,23610,24908,25290,31489,32241,32910,34785,35786,36866,38021,38927,39475,40904,47321,48713,49832,50053,50911,54362,56065,58505,64091,65633,155141,282335,282579,
#Partially deleted in new
chrX	108155606	108439472	chrX:108155606-108439472	3	-	108156999	108439371	789624	45	1654,287,192,117,147,99,162,117,126,72,108,108,75,64,182,126,144,171,162,222,108,72,184,180,161,105,141,108,70,54,45,69,54,93,42,36,63,36,69,117,45,135,81,52,115,	0,3855,4856,6012,7285,8993,9270,9763,13888,14338,15002,15203,15780,16862,18833,19483,20047,21234,23077,23610,24908,25290,31489,32241,32910,34785,35786,36866,38021,38927,39475,40904,47321,48713,49832,50053,50911,54362,56065,58505,64091,65633,155141,282335,283751,
#Partially deleted in new
chrX	108155607	108438430	chrX:108155607-108438430	1	-	108156999	108438196	789624	46	1653,287,192,117,147,99,162,117,126,72,108,108,75,64,182,126,144,171,162,222,108,72,51,184,180,161,105,141,108,70,54,45,69,54,93,42,36,63,36,69,117,45,135,81,52,245,	0,3854,4855,6011,7284,8992,9269,9762,13887,14337,15001,15202,15779,16861,18832,19482,20046,21233,23076,23609,24907,25289,28114,31488,32240,32909,34784,35785,36865,38020,38926,39474,40903,47320,48712,49831,50052,50910,54361,56064,58504,64090,65632,155140,282334,282578,
#Partially deleted in new
chrX	108155607	108438430	chrX:108155607-108438430	1	-	108156999	108438196	789624	43	1653,287,192,117,147,162,117,126,108,108,75,64,182,126,144,171,162,222,108,72,184,180,161,105,141,108,70,54,45,69,54,93,42,36,63,36,69,117,45,135,81,52,245,	0,3854,4855,6011,7284,9269,9762,13887,15001,15202,15779,16861,18832,19482,20046,21233,23076,23609,24907,25289,31488,32240,32909,34784,35785,36865,38020,38926,39474,40903,47320,48712,49831,50052,50910,54361,56064,58504,64090,65632,155140,282334,282578,
#Partially deleted in new
chrX	108155607	108438430	chrX:108155607-108438430	1	-	108156999	108438196	789624	44	1653,287,192,117,147,99,162,117,126,108,108,75,64,182,126,144,171,162,222,108,72,184,180,161,105,141,108,70,54,45,69,54,93,42,36,63,36,69,117,45,135,81,52,245,	0,3854,4855,6011,7284,8992,9269,9762,13887,15001,15202,15779,16861,18832,19482,20046,21233,23076,23609,24907,25289,31488,32240,32909,34784,35785,36865,38020,38926,39474,40903,47320,48712,49831,50052,50910,54361,56064,58504,64090,65632,155140,282334,282578,
#Partially deleted in new
chrX	108155890	108438430	chrX:108155890-108438430	1	-	108156999	108438196	789624	46	1370,287,192,117,147,99,45,81,117,126,72,108,108,75,64,182,126,144,171,162,222,108,72,184,180,161,105,141,108,70,54,45,69,54,93,42,36,63,36,69,117,45,135,81,52,245,	0,3571,4572,5728,7001,8709,8986,9067,9479,13604,14054,14718,14919,15496,16578,18549,19199,19763,20950,22793,23326,24624,25006,31205,31957,32626,34501,35502,36582,37737,38643,39191,40620,47037,48429,49548,49769,50627,54078,55781,58221,63807,65349,154857,282051,282295,
#Partially deleted in new
chrX	108161630	108163598	chrX:108161630-108163598	0	-	108161630	108161630	8553170	2	105,707,	0,1261,
#Partially deleted in new
chrX	108213791	108439472	chrX:108213791-108439472	0	-	108213791	108213791	8553170	6	437,45,135,81,52,115,	0,5906,7448,96956,224150,225566,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	108267641	108438430	chrX:108267641-108438430	0	-	108267641	108267641	8553170	4	1511,81,52,245,	0,43106,170300,170544,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	108267641	108439497	chrX:108267641-108439497	0	-	108267641	108267641	8553170	4	1511,81,52,140,	0,43106,170300,171716,
#Deleted in new
chrX	108383397	108383993	chrX:108383397-108383993	7	+	108383397	108383397	16724991	2	69,408,	0,188,
#Partially deleted in new
chrX	108439843	108443091	chrX:108439843-108443091	0	+	108439843	108439843	8553170	2	363,201,	0,3047,
#Partially deleted in new
chrX	108439881	108697541	chrX:108439881-108697541	1	+	108440125	108696378	789624	53	325,60,90,45,45,63,54,27,81,63,36,42,93,54,57,45,54,42,133,174,84,93,71,192,169,93,105,98,151,114,168,90,150,99,90,140,127,81,99,51,186,9,9,134,73,72,129,99,213,178,115,173,1245,	0,99864,119182,124000,128747,128877,131531,131929,133692,136028,138070,138196,138409,140651,140800,141101,143002,144602,146733,151176,151679,155627,157116,157495,158820,161511,162003,163082,166860,175029,180377,181921,182794,184354,185823,186328,215449,225625,226614,227251,228437,230346,234863,237618,240797,241003,241878,246149,247600,252866,254925,255385,256415,
#Partially deleted in new
chrX	108439923	108697545	chrX:108439923-108697545	3	+	108440125	108696378	789624	51	283,60,90,45,45,63,54,27,81,63,36,42,93,54,57,45,54,42,133,174,84,93,71,192,169,93,105,98,151,114,168,90,150,99,90,140,127,81,99,51,186,134,73,72,129,99,213,178,115,173,1249,	0,99822,119140,123958,128705,128835,131489,131887,133650,135986,138028,138154,138367,140609,140758,141059,142960,144560,146691,151134,151637,155585,157074,157453,158778,161469,161961,163040,166818,174987,180335,181879,182752,184312,185781,186286,215407,225583,226572,227209,228395,237576,240755,240961,241836,246107,247558,252824,254883,255343,256373,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	108439925	108463002	chrX:108439925-108463002	0	+	108440125	108440382	789624	3	281,164,569,	0,415,22508,
#Partially deleted in new
chrX	108439941	108569035	chrX:108439941-108569035	0	+	108439941	108439941	8553170	6	265,60,90,45,45,277,	0,99804,119122,123940,128687,128817,
#Partially deleted in new
chrX	108582491	108627269	chrX:108582491-108627269	1	+	108591068	108626367	789624	20	446,42,133,174,84,93,71,192,169,93,105,98,151,114,168,90,150,99,90,1060,	0,1992,4123,8566,9069,13017,14506,14885,16210,18901,19393,20472,24250,32419,37767,39311,40184,41744,43213,43718,
#Deleted in new
chrX	108622675	108626555	chrX:108622675-108626555	0	+	108622675	108626542	789624	5	150,99,90,140,58,	0,1560,3029,3534,3822,
#Partially deleted in new
chrX	108670034	108687500	chrX:108670034-108687500	0	+	108670034	108670034	8553170	8	202,9,134,73,72,129,99,19,	0,4710,7465,10644,10850,11725,15996,17447,
#Partially deleted in new
chrX	108674451	108696389	chrX:108674451-108696389	0	+	108674451	108674451	8553170	11	302,134,73,72,129,99,213,178,115,173,93,	0,3048,6227,6433,7308,11579,13030,18296,20355,20815,21845,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	108676950	108677057	chrX:108676950-108677057	3	-	108676950	108676950	8553170	1	107,	0,
#Partially deleted in new
chrX	108681876	108696762	chrX:108681876-108696762	0	+	108681876	108696319	789624	4	12,99,213,466,	0,4154,5605,14420,
#Partially deleted in new
chrX	108692821	108696936	chrX:108692821-108696936	0	+	108692821	108696299	789624	3	104,115,640,	0,1985,3475,
#Partially deleted in new
chrX	108693614	108697529	chrX:108693614-108697529	0	+	108693614	108693614	8553170	1	3915,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	108719948	108724944	chrX:108719948-108724944	3	-	108719948	108719948	8553170	1	4996,	0,
#Partially deleted in new
chrX	108722069	108732687	chrX:108722069-108732687	3	-	108722518	108732687	789624	2	454,109,	0,10509,
#Partially deleted in new
chrX	108725885	108726948	chrX:108725885-108726948	3	-	108725885	108725885	8553170	1	1063,	0,
#Partially deleted in new
chrX	108732481	108736409	chrX:108732481-108736409	3	-	108732570	108736344	789624	1	3928,	0,
#Partially deleted in new
chrX	108736010	108737459	chrX:108736010-108737459	1	+	108736010	108736010	8553170	2	356,195,	0,1254,
#Partially deleted in new
chrX	108736539	108738903	chrX:108736539-108738903	3	+	108736539	108736539	789624	3	52,615,475,	0,725,1889,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	108826763	108826869	chrX:108826763-108826869	3	+	108826763	108826763	8553170	1	106,	0,
#Deleted in new
chrX	109341812	109342697	chrX:109341812-109342697	7	+	109341812	109341812	16724991	1	885,	0,
#Partially deleted in new
chrX	109372905	109482072	chrX:109372905-109482072	3	-	109375898	109475936	789624	20	94,89,89,95,99,175,193,164,149,150,157,177,90,132,97,85,355,302,815,207,	0,2992,3173,9212,12278,15583,19005,19986,22435,25643,31422,36086,57401,68445,75163,79117,80599,92236,102301,108960,
#Partially deleted in new
chrX	109535780	109544684	chrX:109535780-109544684	1	+	109535882	109542688	789624	5	197,85,87,145,2178,	0,1156,2264,5694,6726,
#Partially deleted in new
chrX	109536663	109542974	chrX:109536663-109542974	1	+	109538113	109542688	789624	5	152,85,87,145,468,	0,273,1381,4811,5843,
#Partially deleted in new
chrX	109536875	109544690	chrX:109536875-109544690	3	+	109537006	109542688	789624	4	146,87,145,2184,	0,1169,4599,5631,
#Partially deleted in new
chrX	109537117	109543206	chrX:109537117-109543206	1	+	109538113	109542688	789624	4	153,87,145,700,	0,927,4357,5389,
#Partially deleted in new
chrX	109568477	109570289	chrX:109568477-109570289	7	+	109568477	109568477	16724991	1	1812,	0,
#Deleted in new
chrX	109623699	109625172	chrX:109623699-109625172	3	-	109624591	109625020	789624	1	1473,	0,
#Partially deleted in new
chrX	109624243	109634686	chrX:109624243-109634686	0	-	109624243	109624243	8553170	3	78,343,43,	0,4993,10400,
#Partially deleted in new
chrX	109629349	109659513	chrX:109629349-109659513	0	-	109629349	109629349	8553170	2	230,160,	0,30004,
#Deleted in new
chrX	109636833	109637063	chrX:109636833-109637063	7	+	109636833	109636833	16724991	1	230,	0,
#Partially deleted in new
chrX	109641336	109733392	chrX:109641336-109733392	3	-	109644028	109683486	789624	17	2850,158,115,192,75,173,140,72,124,151,139,110,178,531,18,53,254,	0,18017,20194,21874,24083,26764,27697,33065,36651,36928,39661,39929,41382,41799,44090,54807,91802,
#Partially deleted in new
chrX	109641336	109733403	chrX:109641336-109733403	1	-	109644028	109683363	789624	16	2850,158,115,192,75,173,140,72,124,151,139,110,178,237,53,265,	0,18017,20194,21874,24083,26764,27697,33065,36651,36928,39661,39929,41382,41799,54807,91802,
#Partially deleted in new
chrX	109641336	109733302	chrX:109641336-109733302	1	-	109644028	109683486	789624	16	2850,158,115,192,75,173,140,72,124,151,139,110,178,531,53,164,	0,18017,20194,21874,24083,26764,27697,33065,36651,36928,39661,39929,41382,41799,54807,91802,
#Partially deleted in new
chrX	109644025	109669109	chrX:109644025-109669109	0	-	109659418	109669109	789624	6	161,78,133,75,173,76,	0,15328,19244,21394,24075,25008,
#Partially deleted in new
chrX	109681318	109692147	chrX:109681318-109692147	0	-	109681318	109683363	789624	4	57,178,240,112,	0,1400,1817,10717,
#Partially deleted in new
chrX	109682812	109733325	chrX:109682812-109733325	0	-	109682812	109683486	789624	3	84,531,187,	0,323,50326,
#Partially deleted in new
chrX	109682863	109733325	chrX:109682863-109733325	0	-	109682863	109683486	789624	3	33,417,187,	0,272,50275,
#Partially deleted in new
chrX	109682868	109733213	chrX:109682868-109733213	0	-	109682868	109683486	789624	4	28,417,53,75,	0,267,13275,50270,
#Partially deleted in new
chrX	109683324	109733231	chrX:109683324-109733231	0	-	109683324	109683486	789624	4	342,18,53,93,	0,2102,12819,49814,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	109695650	109733275	chrX:109695650-109733275	0	-	109695650	109695650	8553170	2	546,137,	0,37488,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	109744642	109744749	chrX:109744642-109744749	3	-	109744642	109744642	8553170	1	107,	0,
#Partially deleted in new
chrX	109853311	109853919	chrX:109853311-109853919	7	+	109853311	109853311	16724991	1	608,	0,
#Deleted in new
chrX	110002630	110003594	chrX:110002630-110003594	0	+	110002630	110002630	8553170	2	142,94,	0,870,
#Partially deleted in new
chrX	110002634	110177784	chrX:110002634-110177784	1	+	110109086	110173451	789624	6	138,50,67,79,101,4540,	0,64712,106445,142163,168785,170610,
#Partially deleted in new
chrX	110002686	110067396	chrX:110002686-110067396	0	+	110002686	110002686	8553170	3	86,282,50,	0,1196,64660,
#Partially deleted in new
chrX	110003094	110177788	chrX:110003094-110177788	3	+	110003774	110173451	789624	7	62,664,50,67,79,101,4544,	0,406,64252,105985,141703,168325,170150,
#Partially deleted in new
chrX	110003113	110177784	chrX:110003113-110177784	1	+	110003774	110173451	789624	7	65,664,50,67,79,101,4540,	0,387,64233,105966,141684,168306,170131,
#Partially deleted in new
chrX	110003114	110177788	chrX:110003114-110177788	1	+	110003774	110173451	789624	5	64,664,79,101,4544,	0,386,141683,168305,170130,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	110055328	110055426	chrX:110055328-110055426	3	+	110055328	110055328	5263520	1	98,	0,
#Partially deleted in new
chrX	110065100	110171511	chrX:110065100-110171511	0	+	110065100	110065100	8553170	5	423,50,67,79,92,	0,2246,43979,79697,106319,
#Deleted in new
chrX	110082117	110082218	chrX:110082117-110082218	3	+	110082117	110082117	5263520	1	101,	0,
#Partially deleted in new
chrX	110144854	110182734	chrX:110144854-110182734	0	+	110144854	110144854	8553170	4	22,101,209,429,	0,26565,28390,37451,
#Partially deleted in new
chrX	110194185	110318239	chrX:110194185-110318239	3	-	110198519	110318071	789624	6	4449,97,91,115,111,641,	0,6768,8260,22332,70303,123413,
#Partially deleted in new
chrX	110196371	110318084	chrX:110196371-110318084	1	-	110198519	110318071	789624	5	2263,97,91,115,486,	0,4582,6074,20146,121227,
#Partially deleted in new
chrX	110196409	110440233	chrX:110196409-110440233	1	-	110198519	110317702	789624	8	2225,97,91,115,111,251,146,344,	0,4544,6036,20108,68079,121189,230248,243480,
#Partially deleted in new
chrX	110219479	110317771	chrX:110219479-110317771	0	-	110219479	110219479	8553170	3	134,111,173,	0,45009,98119,
#Deleted in new
chrX	110224984	110225063	chrX:110224984-110225063	3	-	110224984	110224984	789624	1	79,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	110305419	110307221	chrX:110305419-110307221	3	-	110305419	110305419	8553170	2	86,475,	0,1327,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	110309149	110317756	chrX:110309149-110317756	0	-	110309149	110309149	8553170	2	388,158,	0,8449,
#Partially deleted in new
chrX	110346702	110346909	chrX:110346702-110346909	7	-	110346702	110346702	16724991	1	207,	0,
#Partially deleted in new
chrX	110358815	110450881	chrX:110358815-110450881	0	+	110450617	110450881	789624	3	101,116,315,	0,86337,91751,
#Partially deleted in new
chrX	110419056	110456334	chrX:110419056-110456334	3	+	110450617	110455321	789624	4	79,116,4098,1133,	0,26096,31510,36145,
#Partially deleted in new
chrX	110450564	110456326	chrX:110450564-110456326	1	+	110450617	110455321	789624	2	4100,1125,	0,4637,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	110520311	110523021	chrX:110520311-110523021	7	+	110520311	110520311	16724991	1	2710,	0,
#Partially deleted in new
chrX	110521129	110521696	chrX:110521129-110521696	5	+	110521129	110521129	16724991	1	567,	0,
#Partially deleted in new
chrX	110636840	110637672	chrX:110636840-110637672	7	+	110636840	110636840	16724991	1	832,	0,
#Partially deleted in new
chrX	110673855	110795765	chrX:110673855-110795765	1	-	110676230	110792163	789624	12	2506,90,165,210,169,68,94,143,94,113,128,80,	0,5480,7626,14738,20307,26798,45979,47529,85805,88839,118232,121830,
#Partially deleted in new
chrX	110675244	110795765	chrX:110675244-110795765	3	-	110676230	110792181	789624	12	1117,90,165,210,169,68,94,143,94,113,128,22,	0,4091,6237,13349,18918,25409,44590,46140,84416,87450,116843,120499,
#Partially deleted in new
chrX	110675775	110795811	chrX:110675775-110795811	1	-	110676230	110792181	789624	12	586,90,168,210,169,68,94,146,94,113,128,68,	0,3560,5706,12818,18387,24878,44059,45609,83885,86919,116312,119968,
#Partially deleted in new
chrX	110675940	110795819	chrX:110675940-110795819	1	-	110676230	110792181	789624	10	421,90,168,210,169,68,94,113,128,76,	0,3395,5541,12653,18222,24713,83720,86754,116147,119803,
#Partially deleted in new
chrX	110676056	110795819	chrX:110676056-110795819	1	-	110676230	110792181	789624	12	305,90,168,210,169,68,94,143,94,113,128,76,	0,3279,5425,12537,18106,24597,43778,45328,83604,86638,116031,119687,
#Partially deleted in new
chrX	110944284	111220918	chrX:110944284-111220918	1	+	111123103	111220447	0	15	344,202,101,154,38,132,166,64,49,113,118,100,197,138,561,	0,178792,197811,203452,208125,218630,219277,228733,247842,248221,250016,251557,252159,272136,276073,
#Partially deleted in new
chrX	110944284	111220918	chrX:110944284-111220918	3	+	111123103	111220447	0	16	344,73,202,101,154,38,132,166,64,49,113,118,100,197,138,561,	0,69543,178792,197811,203452,208125,218630,219277,228733,247842,248221,250016,251557,252159,272136,276073,
#Deleted in new
chrX	111096324	111098786	chrX:111096324-111098786	0	+	111096324	111096324	8553170	5	91,195,67,110,247,	0,218,1065,1250,2215,
#Partially deleted in new
chrX	111096359	111220931	chrX:111096359-111220931	1	+	111123103	111220447	0	19	56,67,144,148,202,101,45,154,38,132,166,64,49,113,118,100,197,138,574,	0,1030,1181,6799,26717,45736,50161,51377,56050,66555,67202,76658,95767,96146,97941,99482,100084,120061,123998,
#Partially deleted in new
chrX	111096359	111220945	chrX:111096359-111220945	1	+	111123103	111220447	0	19	56,67,144,148,202,101,63,154,38,132,166,64,49,113,118,100,197,138,588,	0,1030,1181,6799,26717,45736,48500,51377,56050,66555,67202,76658,95767,96146,97941,99482,100084,120061,123998,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chrX	111096376	111227361	chrX:111096376-111227361	1	+	111123103	111220447	0	18	39,67,110,148,202,101,154,38,132,166,64,49,113,118,100,197,138,7004,	0,1013,1198,6782,26700,45719,51360,56033,66538,67185,76641,95750,96129,97924,99465,100067,120044,123981,
#Partially deleted in new
chrX	111097386	111220447	chrX:111097386-111220447	1	+	111123103	111220447	0	19	70,110,148,202,101,63,45,154,38,132,166,64,49,113,118,100,197,138,90,	0,188,5772,25690,44709,47473,49134,50350,55023,65528,66175,75631,94740,95119,96914,98455,99057,119034,122971,
#Partially deleted in new
chrX	111123075	111152416	chrX:111123075-111152416	0	+	111123103	111152416	789624	6	203,101,63,45,154,7,	0,19020,21784,23445,24661,29334,
#Partially deleted in new
chrX	111123076	111220918	chrX:111123076-111220918	1	+	111123103	111220447	0	15	202,101,45,154,38,132,166,64,49,113,118,100,197,138,561,	0,19019,23444,24660,29333,39838,40485,49941,69050,69429,71224,72765,73367,93344,97281,
#Partially deleted in new
chrX	111123076	111220918	chrX:111123076-111220918	1	+	111123103	111220447	0	16	202,101,63,45,154,38,132,166,64,49,113,118,100,197,138,561,	0,19019,21783,23444,24660,29333,39838,40485,49941,69050,69429,71224,72765,73367,93344,97281,
#Partially deleted in new
chrX	111123076	111220918	chrX:111123076-111220918	1	+	111123103	111220447	0	15	202,101,63,154,38,132,166,64,49,113,118,100,197,138,561,	0,19019,21783,24660,29333,39838,40485,49941,69050,69429,71224,72765,73367,93344,97281,
#Partially deleted in new
chrX	111123103	111220945	chrX:111123103-111220945	1	+	111123103	111220447	789624	16	63,30,79,101,154,38,132,166,64,49,113,118,100,197,138,588,	0,65,96,18992,24633,29306,39811,40458,49914,69023,69402,71197,72738,73340,93317,97254,
#Partially deleted in new
chrX	111142142	111152762	chrX:111142142-111152762	0	+	111142142	111142142	8553170	3	54,154,353,	0,5594,10267,
#Deleted in new
chrX	111169220	111169403	chrX:111169220-111169403	7	+	111169220	111169220	16724991	1	183,	0,
#Deleted in new
chrX	111229888	111231061	chrX:111229888-111231061	7	-	111229888	111229888	16724991	1	1173,	0,
#Partially deleted in new
chrX	111245102	111270523	chrX:111245102-111270523	3	-	111246576	111263936	789624	13	1657,137,122,203,123,187,78,194,193,209,132,180,153,	0,2265,2768,3466,3832,5814,6106,6446,7204,7905,9169,18669,25268,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	111293778	111412272	chrX:111293778-111412272	3	-	111301686	111410398	0	7	7965,95,138,103,341,386,135,	0,18863,37125,39272,107211,116256,118359,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	111293778	111412375	chrX:111293778-111412375	1	-	111301686	111410398	789624	7	7965,98,138,103,341,386,238,	0,18860,37125,39272,107211,116256,118359,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	111293779	111411146	chrX:111293779-111411146	1	-	111301686	111410398	0	7	7964,95,123,103,341,386,393,	0,18862,37139,39271,107210,116255,116974,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	111293782	111412191	chrX:111293782-111412191	1	-	111301686	111410398	0	7	7961,95,123,103,341,386,222,	0,18859,37136,39268,107207,116252,118187,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	111296676	111412181	chrX:111296676-111412181	1	-	111301686	111410398	789624	7	5067,98,123,103,341,386,44,	0,15962,34242,36374,104313,113358,115461,
#Partially deleted in new
chrX	111299868	111412187	chrX:111299868-111412187	1	-	111301686	111410398	789624	8	1875,98,138,103,341,386,28,50,	0,12770,31035,33182,101121,110166,112101,112269,
#Partially deleted in new
chrX	111300607	111412429	chrX:111300607-111412429	1	-	111301686	111410398	0	7	1136,95,123,103,341,386,292,	0,12034,30311,32443,100382,109427,111530,
#Partially deleted in new
chrX	111300757	111412192	chrX:111300757-111412192	1	-	111301686	111410398	789624	7	986,98,138,103,341,386,223,	0,11881,30146,32293,100232,109277,111212,
#Partially deleted in new
chrX	111301682	111410949	chrX:111301682-111410949	1	-	111301686	111410398	0	7	61,95,138,103,341,386,196,	0,10959,29221,31368,99307,108352,109071,
#Partially deleted in new
chrX	111401276	111410582	chrX:111401276-111410582	0	-	111401276	111410398	789624	2	54,548,	0,8758,
#Partially deleted in new
chrX	111410059	111411807	chrX:111410059-111411807	0	-	111410059	111410398	789624	2	361,157,	0,1591,
#Partially deleted in new
chrX	111421509	111421608	chrX:111421509-111421608	3	-	111421509	111421509	8553170	1	99,	0,
#Deleted in new
chrX	111434426	111435024	chrX:111434426-111435024	7	+	111434426	111434426	16724991	1	598,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	111511661	111522399	chrX:111511661-111522399	3	+	111518860	111519130	789624	3	173,97,4325,	0,336,6413,
#Partially deleted in new
chrX	111511779	111518166	chrX:111511779-111518166	0	+	111511779	111511779	8553170	2	315,92,	0,6295,
#Partially deleted in new
chrX	111618807	111619094	chrX:111618807-111619094	7	+	111618807	111618807	16724991	1	287,	0,
#Partially deleted in new
chrX	111619676	111621489	chrX:111619676-111621489	7	-	111619676	111619676	16724991	1	1813,	0,
#Partially deleted in new
chrX	111624209	111624726	chrX:111624209-111624726	7	-	111624209	111624209	16724991	1	517,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	111669828	111669948	chrX:111669828-111669948	7	-	111669828	111669828	16724991	1	120,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	111681117	111690172	chrX:111681117-111690172	1	+	111681218	111688001	789624	4	182,163,139,2286,	0,1014,3847,6769,
#Partially deleted in new
chrX	111681149	111760649	chrX:111681149-111760649	3	+	111681218	111759999	789624	27	150,163,139,367,84,51,47,73,82,163,76,109,65,101,128,247,114,157,121,33,56,72,166,237,41,175,916,	0,982,3815,26877,27815,30525,31334,32075,36696,36962,38945,40453,41643,42648,43784,45659,46182,46464,47035,49245,49375,53901,55564,63518,71640,76438,78584,
#Partially deleted in new
chrX	111681169	111760645	chrX:111681169-111760645	1	+	111685032	111759999	789624	26	255,163,139,367,84,51,47,73,82,163,76,109,65,101,128,247,114,157,121,33,56,72,166,41,175,912,	0,962,3795,26857,27795,30505,31314,32055,36676,36942,38925,40433,41623,42628,43764,45639,46162,46444,47015,49225,49355,53881,55544,71620,76418,78564,
#Partially deleted in new
chrX	111681169	111760645	chrX:111681169-111760645	1	+	111682225	111759999	789624	27	255,104,139,367,84,51,47,73,82,163,76,109,65,101,128,247,114,157,121,33,56,72,166,237,41,175,912,	0,962,3795,26857,27795,30505,31314,32055,36676,36942,38925,40433,41623,42628,43764,45639,46162,46444,47015,49225,49355,53881,55544,63498,71620,76418,78564,
#Partially deleted in new
chrX	111681169	111760645	chrX:111681169-111760645	1	+	111685032	111759999	789624	26	255,59,139,367,84,51,47,73,82,163,76,109,65,101,128,247,114,157,121,33,56,72,166,41,175,912,	0,1066,3795,26857,27795,30505,31314,32055,36676,36942,38925,40433,41623,42628,43764,45639,46162,46444,47015,49225,49355,53881,55544,71620,76418,78564,
#Partially deleted in new
chrX	111681169	111713261	chrX:111681169-111713261	0	+	111681218	111681374	789624	4	255,163,139,37,	0,962,3795,32055,
#Partially deleted in new
chrX	111681175	111760644	chrX:111681175-111760644	0	+	111681218	111682286	789624	26	124,59,139,367,84,51,47,73,82,163,76,109,65,101,128,247,114,157,121,33,56,72,166,41,175,911,	0,1060,3789,26851,27789,30499,31308,32049,36670,36936,38919,40427,41617,42622,43758,45633,46156,46438,47009,49219,49349,53875,55538,71614,76412,78558,
#Partially deleted in new
chrX	111681178	111688254	chrX:111681178-111688254	0	+	111681218	111681374	789624	4	246,163,139,368,	0,953,3786,6708,
#Partially deleted in new
chrX	111681178	111712493	chrX:111681178-111712493	0	+	111681218	111708155	789624	7	121,104,139,367,84,51,10,	0,953,3786,26848,27786,30496,31305,
#Partially deleted in new
chrX	111681178	111760583	chrX:111681178-111760583	0	+	111681218	111713281	789624	22	121,163,139,367,84,73,52,82,163,76,128,247,114,157,121,33,56,72,166,41,175,850,	0,953,3786,26848,27786,32046,35774,36667,36933,38916,43755,45630,46153,46435,47006,49216,49346,53872,55535,71611,76409,78555,
#Partially deleted in new
chrX	111681188	111688128	chrX:111681188-111688128	1	+	111681218	111686155	789624	5	111,163,139,38,242,	0,943,3776,4948,6698,
#Partially deleted in new
chrX	111681191	111688134	chrX:111681191-111688134	0	+	111681218	111681374	789624	4	233,59,139,248,	0,1044,3773,6695,
#Partially deleted in new
chrX	111681193	111688642	chrX:111681193-111688642	0	+	111681218	111682286	789624	5	106,59,139,38,756,	0,1042,3771,4943,6693,
#Partially deleted in new
chrX	111681194	111685278	chrX:111681194-111685278	1	+	111681218	111685119	789624	3	105,163,314,	0,937,3770,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	111681197	111708998	chrX:111681197-111708998	0	+	111681218	111689183	789624	6	102,163,139,111,367,34,	0,934,3767,7889,26829,27767,
#Partially deleted in new
chrX	111681197	111760016	chrX:111681197-111760016	0	+	111681218	111681374	789624	26	227,59,139,367,84,51,47,73,82,163,76,109,65,101,128,247,114,157,121,33,56,72,166,41,175,283,	0,1038,3767,26829,27767,30477,31286,32027,36648,36914,38897,40405,41595,42600,43736,45611,46134,46416,46987,49197,49327,53853,55516,71592,76390,78536,
#Partially deleted in new
chrX	111681203	111760375	chrX:111681203-111760375	0	+	111681218	111681374	789624	26	221,163,139,367,84,51,47,73,82,163,76,109,65,101,128,247,114,157,121,33,56,72,166,41,175,642,	0,928,3761,26823,27761,30471,31280,32021,36642,36908,38891,40399,41589,42594,43730,45605,46128,46410,46981,49191,49321,53847,55510,71586,76384,78530,
#Partially deleted in new
chrX	111681206	111760649	chrX:111681206-111760649	0	+	111681218	111682286	789624	22	93,59,139,51,47,73,109,65,101,128,247,114,157,121,33,56,72,166,237,41,175,916,	0,1029,3758,30468,31277,32018,40396,41586,42591,43727,45602,46125,46407,46978,49188,49318,53844,55507,63461,71583,76381,78527,
#Partially deleted in new
chrX	111681215	111688219	chrX:111681215-111688219	0	+	111681218	111681374	789624	4	209,104,139,333,	0,916,3749,6671,
#Partially deleted in new
chrX	111681233	111688097	chrX:111681233-111688097	0	+	111681233	111688001	789624	4	66,169,139,211,	0,898,3731,6653,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	111681266	111708166	chrX:111681266-111708166	0	+	111681266	111681374	789624	5	158,163,139,111,140,	0,865,3698,7820,26760,
#Partially deleted in new
chrX	111681266	111760256	chrX:111681266-111760256	0	+	111681266	111681374	789624	27	158,104,139,367,84,51,47,73,82,163,76,109,65,101,128,247,114,157,121,33,56,72,166,237,41,175,523,	0,865,3698,26760,27698,30408,31217,31958,36579,36845,38828,40336,41526,42531,43667,45542,46065,46347,46918,49128,49258,53784,55447,63401,71523,76321,78467,
#Partially deleted in new
chrX	111681656	111760649	chrX:111681656-111760649	1	+	111685032	111759999	789624	26	170,59,139,367,84,51,47,73,82,163,76,109,65,101,128,247,114,157,121,33,56,72,166,41,175,916,	0,579,3308,26370,27308,30018,30827,31568,36189,36455,38438,39946,41136,42141,43277,45152,45675,45957,46528,48738,48868,53394,55057,71133,75931,78077,
#Partially deleted in new
chrX	111681662	111688040	chrX:111681662-111688040	1	+	111685032	111688001	789624	4	164,163,139,154,	0,469,3302,6224,
#Partially deleted in new
chrX	111681812	111688132	chrX:111681812-111688132	1	+	111685032	111688001	789624	4	14,59,139,246,	0,423,3152,6074,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	111688726	111709029	chrX:111688726-111709029	0	+	111688726	111688726	8553170	2	471,65,	0,20238,
#Deleted in new
chrX	111713241	111714289	chrX:111713241-111714289	0	+	111713241	111713241	8553170	2	56,44,	0,1004,
#Partially deleted in new
chrX	111717878	111728270	chrX:111717878-111728270	0	+	111717878	111728270	789624	9	49,163,76,101,128,247,114,157,86,	0,233,2216,5919,7055,8930,9453,9735,10306,
#Partially deleted in new
chrX	111718218	111723881	chrX:111718218-111723881	0	+	111718218	111718218	8553170	4	56,76,109,84,	0,1876,3384,5579,
#Partially deleted in new
chrX	111727418	111736933	chrX:111727418-111736933	0	+	111727418	111727418	8553170	7	27,157,121,33,56,72,220,	0,195,766,2976,3106,7632,9295,
#Partially deleted in new
chrX	111727642	111736879	chrX:111727642-111736879	0	+	111727642	111727642	8553170	5	128,121,33,72,166,	0,542,2752,7408,9071,
#Partially deleted in new
chrX	111730535	111734411	chrX:111730535-111734411	0	+	111730535	111730535	8553170	2	45,44,	0,3832,
#Deleted in new
chrX	111734376	111735083	chrX:111734376-111735083	0	+	111734376	111734376	8553170	2	58,33,	0,674,
#Partially deleted in new
chrX	111736834	111743854	chrX:111736834-111743854	0	+	111736834	111736834	8553170	2	45,55,	0,6965,
#Deleted in new
chrX	111736846	111737048	chrX:111736846-111737048	0	+	111736846	111736846	8553170	2	33,67,	0,135,
#Partially deleted in new
chrX	111737026	111760161	chrX:111737026-111760161	0	+	111737026	111737026	8553170	4	55,41,175,428,	0,15763,20561,22707,
#Partially deleted in new
chrX	111744845	111753166	chrX:111744845-111753166	0	+	111744845	111752857	789624	2	59,377,	0,7944,
#Partially deleted in new
chrX	111752745	111759804	chrX:111752745-111759804	0	+	111752745	111752745	8553170	3	85,175,71,	0,4842,6988,
#Partially deleted in new
chrX	111757277	111759899	chrX:111757277-111759899	0	+	111757277	111757277	8553170	2	485,166,	0,2456,
#Deleted in new
chrX	111759811	111760649	chrX:111759811-111760649	0	+	111759811	111760442	789624	2	180,260,	0,578,
#Partially deleted in new
chrX	111774314	112082776	chrX:111774314-112082776	3	-	111776312	111952420	789624	11	2688,90,42,204,196,323,140,337,522,399,898,	0,4670,6850,7620,60606,72799,77983,79455,137976,177728,307564,
#Partially deleted in new
chrX	111876050	111902208	chrX:111876050-111902208	3	+	111901849	111902185	789624	4	139,146,89,669,	0,19900,20356,25489,
#Partially deleted in new
chrX	111876199	111902185	chrX:111876199-111902185	1	+	111901849	111902185	789624	4	74,146,89,646,	0,19751,20207,25340,
#Partially deleted in new
chrX	111881896	111903990	chrX:111881896-111903990	1	+	111901849	111902185	789624	4	120,146,89,2451,	0,14054,14510,19643,
#Deleted in new
chrX	111930734	111931092	chrX:111930734-111931092	7	+	111930734	111930734	16724991	1	358,	0,
#Partially deleted in new
chrX	112319951	112320417	chrX:112319951-112320417	7	-	112319951	112319951	16724991	1	466,	0,
#Partially deleted in new
chrX	112381391	112382220	chrX:112381391-112382220	7	+	112381391	112381391	16724991	1	829,	0,
#Partially deleted in new
chrX	112454499	112457112	chrX:112454499-112457112	3	+	112454728	112455661	789624	1	2613,	0,
#Partially deleted in new
chrX	112630647	112680054	chrX:112630647-112680054	3	-	112631419	112671390	789624	4	954,99,396,226,	0,29979,40361,49181,
#Partially deleted in new
chrX	112631273	112680054	chrX:112631273-112680054	0	-	112631273	112631273	8553170	3	328,75,226,	0,17365,48555,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	112661656	112661768	chrX:112661656-112661768	3	+	112661656	112661656	8553170	1	112,	0,
#Partially deleted in new
chrX	112689914	112690520	chrX:112689914-112690520	7	+	112689914	112689914	16724991	1	606,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	112774502	112840815	chrX:112774502-112840815	3	-	112778566	112815522	789624	12	4162,684,233,123,191,150,146,93,145,520,77,364,	0,4494,6383,8037,16089,17329,30444,35391,36746,40855,57791,65949,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	112774502	112823126	chrX:112774502-112823126	1	-	112778566	112823126	789624	11	4162,684,233,123,191,150,146,93,145,520,872,	0,4494,6383,8037,16089,17329,30444,35391,36746,40855,47752,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	112778511	112822536	chrX:112778511-112822536	1	-	112778566	112822430	789624	11	153,684,233,123,191,150,146,93,145,520,282,	0,485,2374,4028,12080,13320,26435,31382,32737,36846,43743,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	112778566	112825128	chrX:112778566-112825128	1	-	112778566	112823126	789624	12	98,684,233,123,191,150,146,93,145,520,890,57,	0,430,2319,3973,12025,13265,26380,31327,32682,36791,43688,46505,
#Partially deleted in new
chrX	112780354	112822584	chrX:112780354-112822584	1	-	112780868	112822430	789624	9	764,123,191,150,146,93,145,520,330,	0,2185,10237,11477,24592,29539,30894,35003,41900,
#Deleted in new
chrX	112780717	112780788	chrX:112780717-112780788	3	-	112780717	112780717	5263520	1	71,	0,
#Partially deleted in new
chrX	112823136	112840683	chrX:112823136-112840683	0	-	112823136	112823136	8553170	4	52,149,77,232,	0,1935,9157,17315,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	112855873	112856162	chrX:112855873-112856162	3	+	112855873	112855873	8553170	1	289,	0,
#Deleted in new
chrX	112919131	112919230	chrX:112919131-112919230	3	+	112919131	112919131	8553170	1	99,	0,
#Partially deleted in new
chrX	113347412	113347619	chrX:113347412-113347619	7	+	113347412	113347412	16724991	1	207,	0,
#Partially deleted in new
chrX	113522481	113522989	chrX:113522481-113522989	7	+	113522481	113522481	16724991	1	508,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	113616299	114059121	chrX:113616299-114059121	3	-	113616299	113616299	8553170	5	375,96,128,47,118,	0,1758,321893,347253,442704,
#Deleted in new
chrX	113882589	113883667	chrX:113882589-113883667	7	+	113882589	113882589	16724991	1	1078,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	113944185	113944399	chrX:113944185-113944399	3	-	113944185	113944185	8553170	1	214,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	113949916	113950082	chrX:113949916-113950082	3	+	113949916	113949916	8553170	1	166,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	113961710	114059289	chrX:113961710-114059289	1	-	113961710	113961710	8553170	3	1889,117,286,	0,80657,97293,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	113976340	113976633	chrX:113976340-113976633	3	-	113976340	113976340	8553170	1	293,	0,
#Deleted in new
chrX	114017032	114017102	chrX:114017032-114017102	3	+	114017032	114017032	8553170	1	70,	0,
#Deleted in new
chrX	114388987	114389155	chrX:114388987-114389155	7	-	114388987	114388987	16724991	1	168,	0,
#Deleted in new
chrX	114389134	114389954	chrX:114389134-114389954	7	+	114389134	114389134	16724991	1	820,	0,
#Deleted in new
chrX	114390673	114391256	chrX:114390673-114391256	7	+	114390673	114390673	16724991	1	583,	0,
#Partially deleted in new
chrX	114584077	114910061	chrX:114584077-114910061	3	+	114726936	114907415	789624	6	582,67,114,314,201,3473,	0,29737,142780,147216,263925,322511,
#Partially deleted in new
chrX	114584077	114908507	chrX:114584077-114908507	1	+	114726936	114907415	789624	7	582,67,91,114,314,201,1919,	0,29737,133508,142780,147216,263925,322511,
#Partially deleted in new
chrX	114584081	114910061	chrX:114584081-114910061	1	+	114726936	114906880	789624	6	578,67,114,314,106,3473,	0,29733,142776,147212,263921,322507,
#Deleted in new
chrX	114589619	114589935	chrX:114589619-114589935	7	+	114589619	114589619	16724991	1	316,	0,
#Deleted in new
chrX	114630796	114630924	chrX:114630796-114630924	3	+	114630796	114630796	789624	1	128,	0,
#Deleted in new
chrX	114639434	114639519	chrX:114639434-114639519	3	+	114639434	114639434	5263520	1	85,	0,
#Deleted in new
chrX	114651543	114651623	chrX:114651543-114651623	3	+	114651543	114651543	5263520	1	80,	0,
#Deleted in new
chrX	114652654	114652723	chrX:114652654-114652723	3	+	114652654	114652654	5263520	1	69,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	114715232	114715344	chrX:114715232-114715344	3	+	114715232	114715232	5263520	1	112,	0,
#Deleted in new
chrX	114763183	114763263	chrX:114763183-114763263	3	+	114763183	114763183	5263520	1	80,	0,
#Deleted in new
chrX	114774827	114776775	chrX:114774827-114776775	7	-	114774827	114774827	16724991	1	1948,	0,
#Deleted in new
chrX	114823453	114823564	chrX:114823453-114823564	3	+	114823453	114823453	5263520	1	111,	0,
#Deleted in new
chrX	114900358	114900574	chrX:114900358-114900574	7	-	114900358	114900358	16724991	1	216,	0,
#Partially deleted in new
chrX	115003974	115018973	chrX:115003974-115018973	3	-	115004079	115017269	0	11	132,119,145,146,185,121,154,152,127,143,74,	0,1222,3957,5546,6669,9794,10446,11695,13201,13578,14925,
#Partially deleted in new
chrX	115003976	115017644	chrX:115003976-115017644	1	-	115004079	115017269	0	10	130,119,145,146,185,121,154,152,127,92,	0,1220,3955,5544,6667,9792,10444,11693,13199,13576,
#Partially deleted in new
chrX	115014525	115019977	chrX:115014525-115019977	0	-	115014525	115014525	8553170	5	49,152,127,143,128,	0,1144,2650,3027,5324,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	115032426	115032533	chrX:115032426-115032533	3	+	115032426	115032426	8553170	1	107,	0,
#Partially deleted in new
chrX	115063935	115064794	chrX:115063935-115064794	7	-	115063935	115063935	16724991	1	859,	0,
#Deleted in new
chrX	115069236	115069846	chrX:115069236-115069846	7	+	115069236	115069236	16724991	1	610,	0,
#Partially deleted in new
chrX	115110615	115234072	chrX:115110615-115234072	3	-	115113215	115234041	789624	21	2720,78,138,113,58,51,45,117,49,66,108,59,98,112,88,134,137,106,127,145,380,	0,11911,12144,12464,13329,16227,19539,39211,39406,45986,53060,54789,54942,55225,55639,59683,68811,69030,73795,77610,123077,
#Partially deleted in new
chrX	115110625	115234072	chrX:115110625-115234072	1	-	115113215	115234041	789624	20	2710,78,138,113,58,45,117,49,66,108,59,98,112,88,134,137,106,127,145,380,	0,11901,12134,12454,13319,19529,39201,39396,45976,53050,54779,54932,55215,55629,59673,68801,69020,73785,77600,123067,
#Deleted in new
chrX	115126315	115126444	chrX:115126315-115126444	3	-	115126315	115126315	789624	1	129,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	115139029	115139123	chrX:115139029-115139123	3	-	115139029	115139029	8553170	1	94,	0,
#Deleted in new
chrX	115189426	115192868	chrX:115189426-115192868	3	+	115189441	115192645	789624	1	3442,	0,
#Deleted in new
chrX	115198431	115198749	chrX:115198431-115198749	7	+	115198431	115198431	16724991	1	318,	0,
#Partially deleted in new
chrX	115289726	115307554	chrX:115289726-115307554	0	+	115289759	115306218	789624	3	124,132,1350,	0,12265,16478,
#Partially deleted in new
chrX	115289752	115307556	chrX:115289752-115307556	3	+	115289759	115306804	789624	4	98,132,119,1352,	0,12239,13547,16452,
#Partially deleted in new
chrX	115424063	115425600	chrX:115424063-115425600	7	-	115424063	115424063	16724991	2	519,646,	0,891,
#Deleted in new
chrX	115454732	115455194	chrX:115454732-115455194	7	-	115454732	115454732	16724991	1	462,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	115518181	115562731	chrX:115518181-115562731	3	-	115518181	115518181	789624	3	1530,127,106,	0,44222,44444,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	115520483	115562707	chrX:115520483-115562707	1	-	115520483	115520483	789624	4	170,142,127,82,	0,7143,41920,42142,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	115545636	115545717	chrX:115545636-115545717	3	+	115545636	115545636	8553170	1	81,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	115561173	115629916	chrX:115561173-115629916	0	+	115610250	115614208	789624	6	87,81,382,164,130,82,	0,49069,52979,61072,68024,68661,
#Partially deleted in new
chrX	115561181	115650861	chrX:115561181-115650861	3	+	115610250	115649561	0	16	79,81,164,130,133,82,166,143,96,196,79,115,134,124,125,1433,	0,49061,61064,68016,68653,72818,73699,75654,79226,82131,83839,84890,85220,86368,86711,88247,
#Partially deleted in new
chrX	115561227	115649758	chrX:115561227-115649758	1	+	115610914	115649561	0	18	33,81,119,164,130,133,82,166,143,27,96,196,79,115,134,124,125,330,	0,49015,49575,61018,67970,68607,72772,73653,75608,78882,79180,82085,83793,84844,85174,86322,86665,88201,
#Boundary problem: need 17, got 0, diff 17, mapped 0.0
chrX	115593552	115650056	chrX:115593552-115650056	0	+	115610250	115614208	789624	17	80,81,382,164,130,133,82,166,143,96,196,79,115,134,124,125,628,	0,16690,20600,28693,35645,36282,40447,41328,43283,46855,49760,51468,52519,52849,53997,54340,55876,
#Partially deleted in new
chrX	115593607	115650672	chrX:115593607-115650672	1	+	115610250	115649561	0	16	25,81,164,130,133,82,166,143,96,196,79,115,134,124,125,1244,	0,16635,28638,35590,36227,40392,41273,43228,46800,49705,51413,52464,52794,53942,54285,55821,
#Partially deleted in new
chrX	115610242	115634081	chrX:115610242-115634081	0	+	115610250	115634081	789624	5	81,164,40,133,82,	0,12003,14098,19592,23757,
#Partially deleted in new
chrX	115622059	115650857	chrX:115622059-115650857	1	+	115622059	115649561	789624	16	5,166,130,133,82,166,143,27,96,196,79,115,134,124,125,1429,	0,184,7138,7775,11940,12821,14776,18050,18348,21253,22961,24012,24342,25490,25833,27369,
#Partially deleted in new
chrX	115639717	115646431	chrX:115639717-115646431	0	+	115639717	115646431	789624	6	52,96,196,79,115,30,	0,690,3595,5303,6354,6684,
#Partially deleted in new
chrX	115640303	115646157	chrX:115640303-115646157	0	+	115640303	115640303	8553170	4	200,196,79,86,	0,3009,4717,5768,
#Partially deleted in new
chrX	115659712	115660022	chrX:115659712-115660022	7	+	115659712	115659712	16724991	1	310,	0,
#Deleted in new
chrX	115664894	115666133	chrX:115664894-115666133	7	+	115664894	115664894	16724991	1	1239,	0,
#Partially deleted in new
chrX	115702810	115704120	chrX:115702810-115704120	7	+	115702810	115702810	16724991	1	1310,	0,
#Partially deleted in new
chrX	115718941	115719229	chrX:115718941-115719229	7	-	115718941	115718941	16724991	1	288,	0,
#Partially deleted in new
chrX	115840963	115843048	chrX:115840963-115843048	3	+	115840963	115840963	8553170	3	115,120,209,	0,1680,1876,
#Partially deleted in new
chrX	115841009	115843050	chrX:115841009-115843050	0	+	115841009	115841009	8553170	2	69,211,	0,1830,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	115992465	115992773	chrX:115992465-115992773	3	-	115992465	115992465	8553170	1	308,	0,
#Partially deleted in new
chrX	116043482	116044418	chrX:116043482-116044418	7	+	116043482	116043482	16724991	1	936,	0,
#Partially deleted in new
chrX	116106920	116108430	chrX:116106920-116108430	7	-	116106920	116106920	16724991	1	1510,	0,
#Partially deleted in new
chrX	116170721	116174972	chrX:116170721-116174972	3	+	116172280	116173372	0	3	95,60,2727,	0,246,1524,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chrX	116436621	116461458	chrX:116436621-116461458	3	+	116436709	116458955	789624	14	136,166,132,162,148,133,141,229,126,119,100,110,168,2650,	0,1168,4344,6065,7021,8296,10119,14820,16395,17702,18355,18735,20987,22187,
#Deleted in new
chrX	116454976	116458942	chrX:116454976-116458942	0	+	116454976	116454976	8553170	3	100,110,134,	0,380,3832,
#Deleted in new
chrX	116461681	116463003	chrX:116461681-116463003	3	-	116461740	116462856	789624	2	326,222,	0,1100,
#Partially deleted in new
chrX	116669809	116680303	chrX:116669809-116680303	7	-	116669809	116669809	16724991	7	114,100,119,125,230,136,133,	0,394,1036,2329,3688,8327,10361,
#Partially deleted in new
chrX	116688869	116690185	chrX:116688869-116690185	7	+	116688869	116688869	16724991	2	154,147,	0,1169,
#Partially deleted in new
chrX	116692909	116694188	chrX:116692909-116694188	3	-	116692909	116692909	8553170	2	324,188,	0,1091,
#Partially deleted in new
chrX	116748529	116748877	chrX:116748529-116748877	7	-	116748529	116748529	16724991	1	348,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	116850838	116850945	chrX:116850838-116850945	3	-	116850838	116850838	8553170	1	107,	0,
#Partially deleted in new
chrX	116963048	116963676	chrX:116963048-116963676	7	+	116963048	116963048	16724991	1	628,	0,
#Partially deleted in new
chrX	117397937	117398206	chrX:117397937-117398206	7	+	117397937	117397937	16724991	1	269,	0,
#Partially deleted in new
chrX	117399451	117400081	chrX:117399451-117400081	7	+	117399451	117399451	16724991	2	347,193,	0,437,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	117894631	117895683	chrX:117894631-117895683	3	-	117894631	117894631	8553170	1	1052,	0,
#Partially deleted in new
chrX	117897812	118116798	chrX:117897812-118116798	1	-	117898907	117945520	789624	7	1583,114,796,197,133,142,291,	0,4020,11488,21708,22425,47621,218695,
#Partially deleted in new
chrX	117897813	117973738	chrX:117897813-117973738	1	-	117898907	117972828	789624	7	1582,114,796,197,133,142,1008,	0,4019,11487,21707,22424,47620,74917,
#Partially deleted in new
chrX	117897813	117947942	chrX:117897813-117947942	1	-	117898907	117945520	789624	6	1582,114,796,197,133,2509,	0,4019,11487,21707,22424,47620,
#Partially deleted in new
chrX	117897813	117973579	chrX:117897813-117973579	1	-	117898907	117945520	789624	7	1582,114,796,197,133,142,270,	0,4019,11487,21707,22424,47620,75496,
#Partially deleted in new
chrX	117897813	118116865	chrX:117897813-118116865	1	-	117898907	118028473	789624	8	1582,114,796,197,133,142,74,358,	0,4019,11487,21707,22424,47620,130610,218694,
#Partially deleted in new
chrX	117897813	118117340	chrX:117897813-118117340	3	-	117898907	118028473	789624	8	1582,114,796,197,133,142,74,64,	0,4019,11487,21707,22424,47620,130610,219463,
#Partially deleted in new
chrX	117897813	118116865	chrX:117897813-118116865	1	-	117898907	117945547	789624	7	1582,114,796,197,133,142,358,	0,4019,11487,21707,22424,47620,218694,
#Partially deleted in new
chrX	117898571	117985320	chrX:117898571-117985320	1	-	117898907	117985280	789624	8	824,114,796,197,133,142,66,81,	0,3261,10729,20949,21666,46862,84908,86668,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	117914243	117914345	chrX:117914243-117914345	3	-	117914243	117914243	8553170	1	102,	0,
#Partially deleted in new
chrX	117920344	118028495	chrX:117920344-118028495	0	-	117920344	118028473	789624	4	26,142,66,72,	0,25089,63135,108079,
#Partially deleted in new
chrX	118128747	118129018	chrX:118128747-118129018	7	+	118128747	118128747	16724991	1	271,	0,
#Partially deleted in new
chrX	118146062	118146561	chrX:118146062-118146561	7	+	118146062	118146062	16724991	1	499,	0,
#Partially deleted in new
chrX	118278158	118283367	chrX:118278158-118283367	7	+	118278158	118278158	16724991	2	94,96,	0,5113,
#Partially deleted in new
chrX	118346072	118449958	chrX:118346072-118449958	1	+	118346503	118448987	789624	18	508,34,640,131,96,137,84,107,152,139,65,114,123,102,116,128,135,1066,	0,32346,46559,47982,49176,50897,52314,58265,60802,63416,64822,86708,90629,96171,96492,97487,98287,102820,
#Partially deleted in new
chrX	118346108	118449961	chrX:118346108-118449961	3	+	118346503	118448987	789624	20	472,34,75,640,131,96,137,84,107,152,139,65,114,123,192,102,116,128,135,1069,	0,32310,41231,46523,47946,49140,50861,52278,58229,60766,63380,64786,86672,90593,95259,96135,96456,97451,98251,102784,
#Partially deleted in new
chrX	118346142	118449937	chrX:118346142-118449937	1	+	118346503	118448987	789624	20	438,34,75,640,131,96,137,84,107,152,139,65,114,123,192,102,116,104,135,1045,	0,32276,41197,46489,47912,49106,50827,52244,58195,60732,63346,64752,86638,90559,95225,96101,96422,97441,98217,102750,
#Partially deleted in new
chrX	118346198	118393215	chrX:118346198-118393215	0	+	118346198	118346198	8553170	3	382,75,584,	0,41141,46433,
#Deleted in new
chrX	118386393	118386471	chrX:118386393-118386471	3	+	118386393	118386393	5263520	1	78,	0,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chrX	118392747	118449336	chrX:118392747-118449336	0	+	118392747	118448911	789624	18	524,131,96,137,84,107,152,139,65,114,123,192,102,116,128,135,55,444,	0,1307,2501,4222,5639,11590,14127,16741,18147,40033,43954,48620,49496,49817,50812,51612,54312,56145,
#Partially deleted in new
chrX	118495897	118686163	chrX:118495897-118686163	1	+	118495971	118685807	789624	53	176,117,90,83,70,96,135,178,80,84,141,213,123,83,123,77,185,66,93,124,122,87,90,119,70,126,72,147,84,112,179,117,76,110,112,67,48,143,116,138,183,114,216,58,107,123,114,147,211,191,101,151,476,	0,46827,47028,47613,49425,50123,65485,70107,70676,72181,76425,77908,82627,84199,88837,89143,92239,92515,94312,97316,101533,102132,103241,109340,112174,112333,113380,114374,118794,119702,122652,128641,131606,132265,134481,140448,142182,143537,145292,147559,153047,156066,158704,159006,166788,175125,180038,180693,184584,185160,185796,187181,189790,
#Partially deleted in new
chrX	118495908	118686147	chrX:118495908-118686147	3	+	118495971	118685807	789624	53	165,117,90,83,70,96,135,178,80,84,141,213,123,83,123,77,185,66,93,124,122,87,90,119,70,126,72,147,84,112,179,117,76,110,112,67,48,143,116,138,183,114,216,58,107,123,114,147,211,191,101,139,460,	0,46816,47017,47602,49414,50112,65474,70096,70665,72170,76414,77897,82616,84188,88826,89132,92228,92504,94301,97305,101522,102121,103230,109329,112163,112322,113369,114363,118783,119691,122641,128630,131595,132254,134470,140437,142171,143526,145281,147548,153036,156055,158693,158995,166777,175114,180027,180682,184573,185149,185785,187170,189779,
#Partially deleted in new
chrX	118546110	118686139	chrX:118546110-118686139	0	+	118546110	118685807	789624	49	6,135,178,80,84,141,213,123,83,123,77,185,66,93,124,122,87,90,119,70,126,72,147,84,112,39,179,117,76,110,112,67,48,143,116,138,183,114,216,58,107,123,114,147,211,191,101,139,452,	0,15272,19894,20463,21968,26212,27695,32414,33986,38624,38930,42026,42302,44099,47103,51320,51919,53028,59127,61961,62120,63167,64161,68581,69489,70091,72439,78428,81393,82052,84268,90235,91969,93324,95079,97346,102834,105853,108491,108793,116575,124912,129825,130480,134371,134947,135583,136968,139577,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	118569404	118569515	chrX:118569404-118569515	3	-	118569404	118569404	8553170	1	111,	0,
#Deleted in new
chrX	118632374	118634218	chrX:118632374-118634218	7	-	118632374	118632374	16724991	1	1844,	0,
#Partially deleted in new
chrX	118683102	118686147	chrX:118683102-118686147	0	+	118683102	118685525	789624	3	115,18,460,	0,2417,2585,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	118727571	118794539	chrX:118727571-118794539	3	+	118727638	118791854	0	11	155,140,139,121,188,152,48,133,97,85,2778,	0,13445,19382,22086,30483,33566,38958,39272,46307,48855,64190,
#Partially deleted in new
chrX	118727601	118761520	chrX:118727601-118761520	1	+	118727638	118761301	0	6	125,140,139,121,188,383,	0,13415,19352,22056,30453,33536,
#Deleted in new
chrX	118738054	118738182	chrX:118738054-118738182	3	+	118738054	118738054	8553170	1	128,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	118749702	118766897	chrX:118749702-118766897	0	+	118749702	118749702	8553170	6	76,188,105,152,48,54,	0,8352,9162,11435,16827,17141,
#Deleted in new
chrX	118769795	118770857	chrX:118769795-118770857	7	+	118769795	118769795	16724991	1	1062,	0,
#Deleted in new
chrX	118823789	118826968	chrX:118823789-118826968	3	+	118825244	118826453	789624	4	216,52,125,1838,	0,549,799,1341,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	118839553	118919669	chrX:118839553-118919669	0	+	118839553	118839553	8553170	10	222,57,45,115,76,92,241,91,122,872,	0,2261,5687,6396,7500,15910,45429,52558,75803,79244,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	118839555	118857886	chrX:118839555-118857886	1	+	118839555	118839555	8553170	7	220,51,45,115,76,92,1690,	0,2259,5685,6394,7498,15908,16641,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	118839589	118882015	chrX:118839589-118882015	0	+	118839589	118839589	789624	7	186,51,45,115,76,92,238,	0,2225,5651,6360,7464,15874,42188,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	118839630	118919667	chrX:118839630-118919667	3	+	118839630	118839630	8553170	11	145,51,45,115,76,92,99,241,91,122,870,	0,2184,5610,6319,7423,15833,42147,45352,52481,75726,79167,
#Partially deleted in new
chrX	118877885	118879185	chrX:118877885-118879185	7	-	118877885	118877885	16724991	2	508,451,	0,849,
#Deleted in new
chrX	118938152	118939134	chrX:118938152-118939134	7	+	118938152	118938152	16724991	2	742,163,	0,819,
#Partially deleted in new
chrX	118974613	119018355	chrX:118974613-119018355	1	+	118974780	119017690	789624	10	984,119,265,91,115,122,159,163,150,821,	0,3731,14794,15856,31507,34512,37201,38425,39593,42921,
#Partially deleted in new
chrX	118974617	119017983	chrX:118974617-119017983	0	+	118974780	119012901	789624	11	980,119,123,265,91,115,122,159,322,150,449,	0,3727,8203,14790,15852,31503,34508,37197,38262,39589,42917,
#Partially deleted in new
chrX	118974749	119017929	chrX:118974749-119017929	3	+	118974780	119017690	789624	11	848,119,123,265,91,115,122,159,163,150,395,	0,3595,8071,14658,15720,31371,34376,37065,38289,39457,42785,
#Partially deleted in new
chrX	118975361	119017987	chrX:118975361-119017987	0	+	118975361	119017690	789624	10	236,119,265,91,115,122,159,163,150,453,	0,2983,14046,15108,30759,33764,36453,37677,38845,42173,
#Partially deleted in new
chrX	118976331	119018355	chrX:118976331-119018355	1	+	118978451	119017690	789624	12	614,119,123,156,265,91,115,122,159,163,150,821,	0,2013,6489,10593,13076,14138,29789,32794,35483,36707,37875,41203,
#Partially deleted in new
chrX	118976331	119017983	chrX:118976331-119017983	0	+	118976331	118976331	8553170	12	614,119,123,156,265,91,115,122,159,322,150,449,	0,2013,6489,10593,13076,14138,29789,32794,35483,36548,37875,41203,
#Deleted in new
chrX	119073225	119076373	chrX:119073225-119076373	3	+	119073225	119075081	789624	3	853,153,141,	0,1734,3007,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chrX	119078634	119150579	chrX:119078634-119150579	3	-	119081328	119150579	789624	14	2870,106,164,3201,109,108,198,156,135,127,169,71,121,289,	0,4380,6748,7911,15032,15354,17859,26357,29702,30441,37861,44947,68838,71656,
#Deleted in new
chrX	119186441	119186829	chrX:119186441-119186829	7	-	119186441	119186441	16724991	1	388,	0,
#Deleted in new
chrX	119220781	119221742	chrX:119220781-119221742	7	+	119220781	119220781	16724991	1	961,	0,
#Deleted in new
chrX	119222563	119223245	chrX:119222563-119223245	7	-	119222563	119222563	16724991	1	682,	0,
#Partially deleted in new
chrX	119236244	119244465	chrX:119236244-119244465	1	+	119236363	119243254	0	2	447,1315,	0,6906,
#Partially deleted in new
chrX	119236252	119244466	chrX:119236252-119244466	3	+	119236363	119243254	0	3	439,156,1316,	0,4056,6898,
#Partially deleted in new
chrX	119249345	119257667	chrX:119249345-119257667	7	-	119249345	119249345	16724991	4	1605,236,131,747,	0,3254,5386,7575,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	119291528	119335610	chrX:119291528-119335610	3	+	119291528	119291528	789624	4	93,117,136,2561,	0,33378,34653,41521,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	119356300	119393595	chrX:119356300-119393595	3	-	119356300	119356300	8553170	3	144,121,370,	0,27458,36925,
#Partially deleted in new
chrX	119379711	119380104	chrX:119379711-119380104	7	+	119379711	119379711	16724991	1	393,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	119399059	119454478	chrX:119399059-119454478	3	+	119399403	119453065	789624	5	619,242,173,135,1614,	0,7400,11130,52949,53805,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	119399379	119454472	chrX:119399379-119454472	0	+	119399379	119399379	8553170	6	299,242,173,173,294,1518,	0,7080,10810,26802,52470,53575,
#Partially deleted in new
chrX	119399408	119453182	chrX:119399408-119453182	0	+	119399408	119399408	8553170	4	270,173,135,318,	0,10781,52600,53456,
#Partially deleted in new
chrX	119406555	119452941	chrX:119406555-119452941	0	+	119406555	119406555	8553170	3	146,135,77,	0,45453,46309,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	119422916	119423547	chrX:119422916-119423547	3	+	119422916	119422916	8553170	2	400,33,	0,598,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	119434518	119434820	chrX:119434518-119434820	3	+	119434518	119434518	8553170	1	302,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	119456557	119456658	chrX:119456557-119456658	3	+	119456557	119456557	8553170	1	101,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	119466033	119469095	chrX:119466033-119469095	0	-	119466033	119466033	789624	1	3062,	0,
#Partially deleted in new
chrX	119466033	119468262	chrX:119466033-119468262	1	-	119466033	119466033	789624	2	1717,157,	0,2072,
#Partially deleted in new
chrX	119466423	119469098	chrX:119466423-119469098	3	-	119466423	119466423	789624	2	1327,289,	0,2386,
#Partially deleted in new
chrX	119467306	119469092	chrX:119467306-119469092	0	-	119467306	119467306	8553170	2	444,111,	0,1675,
#Deleted in new
chrX	119468399	119471319	chrX:119468399-119471319	3	+	119468515	119471058	789624	4	227,487,141,419,	0,1261,1973,2501,
#Deleted in new
chrX	119468421	119470155	chrX:119468421-119470155	0	+	119468421	119468421	8553170	2	69,414,	0,1320,
#Deleted in new
chrX	119469276	119470940	chrX:119469276-119470940	0	+	119469276	119469276	8553170	4	107,487,141,40,	0,384,1096,1624,
#Deleted in new
chrX	119470261	119471081	chrX:119470261-119471081	0	+	119470261	119470261	8553170	2	252,181,	0,639,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	119538148	119565373	chrX:119538148-119565373	1	-	119539726	119560362	789624	7	1641,93,90,139,42,118,249,	0,3179,4356,6204,7314,22119,26976,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	119539317	119565408	chrX:119539317-119565408	1	-	119539726	119565355	789624	6	472,93,90,139,118,177,	0,2010,3187,5035,20950,25914,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	119539385	119565401	chrX:119539385-119565401	3	-	119539726	119565355	789624	7	404,93,90,139,42,118,170,	0,1942,3119,4967,6077,20882,25846,
#Partially deleted in new
chrX	119539569	119542767	chrX:119539569-119542767	0	-	119539569	119539569	8553170	3	220,93,263,	0,1758,2935,
#Partially deleted in new
chrX	119574466	119584425	chrX:119574466-119584425	3	+	119574711	119583255	789624	6	289,81,26,90,89,1299,	0,434,908,7040,8121,8660,
#Partially deleted in new
chrX	119574535	119583347	chrX:119574535-119583347	1	+	119574711	119583255	789624	6	220,81,26,90,80,221,	0,365,839,6971,8061,8591,
#Partially deleted in new
chrX	119574545	119584101	chrX:119574545-119584101	1	+	119574711	119583255	789624	5	210,81,26,89,975,	0,355,829,8042,8581,
#Deleted in new
chrX	119574548	119575397	chrX:119574548-119575397	0	+	119574548	119574548	8553170	2	207,497,	0,352,
#Partially deleted in new
chrX	119574562	119584425	chrX:119574562-119584425	1	+	119581580	119583255	789624	6	193,74,26,90,89,1299,	0,345,812,6944,8025,8564,
#Partially deleted in new
chrX	119574562	119591083	chrX:119574562-119591083	1	+	119574711	119590169	789624	6	193,81,26,90,89,956,	0,338,812,6944,8025,15565,
#Deleted in new
chrX	119574570	119575794	chrX:119574570-119575794	0	+	119574570	119574570	8553170	3	185,81,420,	0,330,804,
#Partially deleted in new
chrX	119574747	119583621	chrX:119574747-119583621	1	+	119574955	119583255	789624	5	234,26,90,89,495,	0,627,6759,7840,8379,
#Partially deleted in new
chrX	119580334	119584418	chrX:119580334-119584418	0	+	119580334	119580334	8553170	3	1262,89,1292,	0,2253,2792,
#Partially deleted in new
chrX	119582367	119583417	chrX:119582367-119583417	0	+	119582367	119582367	8553170	2	309,291,	0,759,
#Partially deleted in new
chrX	119588336	119606443	chrX:119588336-119606443	3	-	119589351	119592497	789624	3	2973,131,713,	0,4046,17394,
#Deleted in new
chrX	119588336	119593150	chrX:119588336-119593150	0	-	119588336	119588336	8553170	2	2973,768,	0,4046,
#Deleted in new
chrX	119588340	119593150	chrX:119588340-119593150	1	-	119589351	119592497	789624	2	2969,768,	0,4042,
#Partially deleted in new
chrX	119588340	119605883	chrX:119588340-119605883	1	-	119589351	119603490	789624	4	2969,131,98,153,	0,4042,15121,17390,
#Deleted in new
chrX	119588342	119591309	chrX:119588342-119591309	0	-	119588342	119588342	8553170	2	162,228,	0,2739,
#Partially deleted in new
chrX	119615723	119693370	chrX:119615723-119693370	1	-	119625375	119693105	0	11	1019,45,191,133,169,97,162,187,196,115,295,	0,9611,13594,17636,21303,24968,34213,37130,47758,59830,77352,
#Partially deleted in new
chrX	119616711	119693370	chrX:119616711-119693370	1	-	119616732	119693105	0	10	31,191,133,169,97,162,187,196,115,295,	0,12606,16648,20315,23980,33225,36142,46770,58842,76364,
#Partially deleted in new
chrX	119616711	119693370	chrX:119616711-119693370	0	-	119629491	119693105	0	10	31,74,45,191,97,162,187,196,115,295,	0,2001,8623,12606,23980,33225,36142,46770,58842,76364,
#Partially deleted in new
chrX	119616715	119693370	chrX:119616715-119693370	1	-	119625375	119693105	0	11	27,45,191,133,169,97,162,187,196,115,295,	0,8619,12602,16644,20311,23976,33221,36138,46766,58838,76360,
#Partially deleted in new
chrX	119616944	119693370	chrX:119616944-119693370	1	-	119620035	119693105	789624	10	3107,191,133,169,97,162,187,196,115,295,	0,12373,16415,20082,23747,32992,35909,46537,58609,76131,
#Partially deleted in new
chrX	119616947	119693370	chrX:119616947-119693370	1	-	119625375	119693105	0	11	3104,45,191,133,169,97,162,187,196,115,295,	0,8387,12370,16412,20079,23744,32989,35906,46534,58606,76128,
#Partially deleted in new
chrX	119617638	119693370	chrX:119617638-119693370	3	-	119618761	119693105	0	10	1148,191,133,169,97,162,187,196,115,295,	0,11679,15721,19388,23053,32298,35215,45843,57915,75437,
#Partially deleted in new
chrX	119619308	119633424	chrX:119619308-119633424	0	-	119619308	119619308	8553170	4	743,62,191,65,	0,6026,10009,14051,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	119628815	119633502	chrX:119628815-119633502	0	-	119628815	119628815	8553170	2	693,143,	0,4544,
#Deleted in new
chrX	119646737	119646848	chrX:119646737-119646848	3	-	119646737	119646737	5263520	1	111,	0,
#Deleted in new
chrX	119693567	119696059	chrX:119693567-119696059	3	+	119693567	119693567	8553170	1	2492,	0,
#Deleted in new
chrX	119758612	119760164	chrX:119758612-119760164	3	+	119758667	119759615	789624	1	1552,	0,
#Partially deleted in new
chrX	119786503	119787456	chrX:119786503-119787456	0	-	119786503	119786503	8553170	2	229,176,	0,777,
#Partially deleted in new
chrX	119786505	119791643	chrX:119786505-119791643	3	-	119786683	119791576	0	3	227,104,70,	0,3402,5068,
#Partially deleted in new
chrX	119786505	119791595	chrX:119786505-119791595	0	-	119786505	119786505	8553170	2	227,1688,	0,3402,
#Deleted in new
chrX	119787352	119787484	chrX:119787352-119787484	3	-	119787352	119787352	789624	1	132,	0,
#Partially deleted in new
chrX	119805310	119837932	chrX:119805310-119837932	0	-	119807485	119837932	789624	7	125,107,108,102,108,108,176,	0,2164,9889,17631,26341,29609,32446,
#Partially deleted in new
chrX	119834021	119852998	chrX:119834021-119852998	3	-	119834877	119852928	0	11	1006,295,161,39,183,44,111,99,107,107,226,	0,3735,4345,6624,7054,7713,9169,11176,17473,17745,18751,
#Partially deleted in new
chrX	119834025	119852998	chrX:119834025-119852998	1	-	119834877	119852928	0	10	1002,295,161,183,44,111,99,107,107,226,	0,3731,4341,7050,7709,9165,11172,17469,17741,18747,
#Partially deleted in new
chrX	119834481	119852971	chrX:119834481-119852971	1	-	119837898	119852928	789624	9	546,160,12,44,111,99,107,107,199,	0,3275,3439,7253,8709,10716,17013,17285,18291,
#Partially deleted in new
chrX	119838265	119845254	chrX:119838265-119845254	0	-	119838265	119838265	8553170	6	262,91,183,44,111,57,	0,2328,2810,3469,4925,6932,
#Deleted in new
chrX	119870474	119871827	chrX:119870474-119871827	3	-	119870581	119871613	789624	1	1353,	0,
#Partially deleted in new
chrX	119871486	119876662	chrX:119871486-119876662	3	+	119871911	119876534	0	3	527,90,149,	0,1817,5027,
#Partially deleted in new
chrX	119895836	119920712	chrX:119895836-119920712	1	+	119903223	119920607	789624	6	151,113,179,92,53,205,	0,318,7377,7658,24074,24671,
#Partially deleted in new
chrX	119895836	119920716	chrX:119895836-119920716	3	+	119903223	119920607	789624	7	151,113,179,92,180,53,209,	0,318,7377,7658,18862,24074,24671,
#Partially deleted in new
chrX	119896192	119920716	chrX:119896192-119920716	1	+	119903223	119920607	789624	5	75,179,92,53,209,	0,7021,7302,23718,24315,
#Partially deleted in new
chrX	119896192	119903652	chrX:119896192-119903652	1	+	119903223	119903595	789624	3	75,179,158,	0,7021,7302,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	119919783	119920716	chrX:119919783-119920716	0	+	119919783	119919783	8553170	2	180,209,	0,724,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	119920671	119943772	chrX:119920671-119943772	3	-	119925219	119943605	789624	9	4723,150,76,110,64,135,71,81,553,	0,9344,11264,11435,13822,15625,15940,18058,22548,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	119921260	119922840	chrX:119921260-119922840	0	-	119921260	119921260	8553170	2	663,147,	0,1433,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	119925050	119938077	chrX:119925050-119938077	0	-	119925050	119925050	8553170	7	344,150,76,110,64,135,1466,	0,4965,6885,7056,9443,11246,11561,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	119930124	119932752	chrX:119930124-119932752	0	-	119930124	119930124	8553170	3	41,76,646,	0,1811,1982,
#Partially deleted in new
chrX	119942833	119992809	chrX:119942833-119992809	7	+	119942833	119942833	16724991	5	1093,126,805,335,309,	0,37417,47497,48533,49667,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	119978712	120015544	chrX:119978712-120015544	5	-	119978712	119978712	16724991	5	46,73,142,334,222,	0,32006,34600,36068,36610,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	119986305	120025138	chrX:119986305-120025138	7	-	119986305	119986305	16724991	6	625,73,142,334,186,184,	0,24413,27007,28475,29017,38649,
#Partially deleted in new
chrX	119990929	119992810	chrX:119990929-119992810	5	+	119990929	119990929	16724991	3	206,335,310,	0,437,1571,
#Partially deleted in new
chrX	119991050	119992582	chrX:119991050-119992582	5	+	119991050	119991050	16724991	3	85,335,82,	0,316,1450,
#Partially deleted in new
chrX	119998086	120000088	chrX:119998086-120000088	7	-	119998086	119998086	16724991	3	82,335,85,	0,1346,1917,
#Partially deleted in new
chrX	120013372	120015407	chrX:120013372-120015407	5	-	120013372	120013372	16724991	3	82,334,85,	0,1408,1950,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	120036235	120146854	chrX:120036235-120146854	3	+	120036235	120036235	789624	5	297,288,122,178,1217,	0,84616,102762,107487,109402,
#Partially deleted in new
chrX	120070671	120077705	chrX:120070671-120077705	3	-	120072515	120077552	789624	4	2174,46,412,232,	0,5228,6205,6802,
#Partially deleted in new
chrX	120109052	120115937	chrX:120109052-120115937	3	-	120109191	120115862	789624	3	250,46,473,	0,3816,6412,
#Partially deleted in new
chrX	120117641	120119700	chrX:120117641-120119700	3	-	120117641	120117641	789624	3	68,50,161,	0,220,1898,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	120120549	120127100	chrX:120120549-120127100	0	+	120120549	120120549	8553170	3	131,288,156,	0,302,6395,
#Partially deleted in new
chrX	120120551	120121862	chrX:120120551-120121862	0	+	120120551	120120551	8553170	3	129,288,106,	0,300,1205,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	120120952	120244888	chrX:120120952-120244888	7	-	120120952	120120952	16724991	5	28,119,137,148,125,	0,2386,14970,16089,123811,
#Partially deleted in new
chrX	120158560	120165630	chrX:120158560-120165630	3	+	120158750	120163787	789624	4	269,412,46,2173,	0,454,1797,4897,
#Partially deleted in new
chrX	120178487	120245267	chrX:120178487-120245267	5	-	120178487	120178487	16724991	2	69,504,	0,66276,
#Partially deleted in new
chrX	120202060	120202748	chrX:120202060-120202748	7	-	120202060	120202060	16724991	1	688,	0,
#Partially deleted in new
chrX	120210460	120212680	chrX:120210460-120212680	7	-	120210460	120210460	16724991	4	90,340,617,268,	0,202,1014,1952,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	120221347	120245061	chrX:120221347-120245061	4	-	120221347	120221347	16724991	2	298,298,	0,23416,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	120236457	120245233	chrX:120236457-120245233	4	-	120236457	120236457	16724991	3	1785,129,470,	0,3769,8306,
#Deleted in new
chrX	120244758	120245125	chrX:120244758-120245125	5	-	120244758	120244758	16724991	1	367,	0,
#Deleted in new
chrX	120250751	120258398	chrX:120250751-120258398	3	+	120253415	120255434	0	2	226,4985,	0,2662,
#Deleted in new
chrX	120250754	120255434	chrX:120250754-120255434	1	+	120253415	120255434	0	3	223,102,2021,	0,1914,2659,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	120258649	120311433	chrX:120258649-120311433	1	-	120260869	120311309	789624	10	2379,144,163,89,72,69,90,63,143,182,	0,9594,18235,26477,26975,28504,32601,35339,45699,52602,
#Partially deleted in new
chrX	120258649	120311536	chrX:120258649-120311536	1	-	120260869	120311309	789624	9	2379,144,163,89,69,90,63,143,285,	0,9594,18235,26477,28504,32601,35339,45699,52602,
#Partially deleted in new
chrX	120258650	120285991	chrX:120258650-120285991	1	-	120260869	120285889	789624	5	2378,144,163,89,105,	0,9593,18234,26476,27236,
#Partially deleted in new
chrX	120258650	120311536	chrX:120258650-120311536	3	-	120260869	120311309	789624	7	2378,144,69,90,63,143,285,	0,9593,28503,32600,35338,45698,52601,
#Partially deleted in new
chrX	120268362	120311556	chrX:120268362-120311556	0	-	120268362	120311309	789624	6	25,69,90,63,143,305,	0,18791,22888,25626,35986,42889,
#Partially deleted in new
chrX	120273126	120273526	chrX:120273126-120273526	7	+	120273126	120273126	16724991	1	400,	0,
#Deleted in new
chrX	120309892	120311402	chrX:120309892-120311402	0	-	120309892	120309892	8553170	2	236,151,	0,1359,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	120362084	120383249	chrX:120362084-120383249	1	+	120362168	120379634	789624	7	147,265,105,197,57,96,3777,	0,4440,9021,13287,14295,16593,17388,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	120362111	120382371	chrX:120362111-120382371	1	+	120362168	120379634	789624	8	120,265,129,105,197,57,96,2899,	0,4413,8603,8994,13260,14268,16566,17361,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	120362111	120382371	chrX:120362111-120382371	3	+	120362168	120379634	789624	8	120,253,129,105,197,57,96,2899,	0,4413,8603,8994,13260,14268,16566,17361,
#Partially deleted in new
chrX	120427826	120469365	chrX:120427826-120469365	1	-	120428483	120469169	0	9	800,165,64,123,185,159,214,119,260,	0,13903,14772,18478,20014,21143,27530,28824,41279,
#Partially deleted in new
chrX	120430825	120469306	chrX:120430825-120469306	1	-	120431322	120469169	0	9	637,165,64,123,185,159,214,119,201,	0,10904,11773,15479,17015,18144,24531,25825,38280,
#Partially deleted in new
chrX	120431247	120449068	chrX:120431247-120449068	0	-	120439153	120449068	789624	7	215,218,165,64,123,185,99,	0,7828,10482,11351,15057,16593,17722,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	120436493	120469306	chrX:120436493-120469306	3	-	120439153	120469169	0	9	2800,165,64,123,185,159,214,119,201,	0,5236,6105,9811,11347,12476,18863,20157,32612,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	120503036	120503096	chrX:120503036-120503096	3	-	120503036	120503036	8553170	1	60,	0,
#Partially deleted in new
chrX	120524608	120560700	chrX:120524608-120560700	1	-	120526760	120560638	0	20	2248,153,173,106,114,108,86,111,105,193,119,68,83,90,163,74,70,104,116,618,	0,5493,7813,9872,11221,12318,13515,14051,14659,15761,16993,18357,19118,19505,19872,20835,21938,22527,33315,35474,
#Partially deleted in new
chrX	120526395	120561440	chrX:120526395-120561440	1	-	120526760	120561399	789624	21	461,153,173,106,114,108,86,111,105,193,119,68,83,90,163,74,70,104,116,543,69,	0,3706,6026,8085,9434,10531,11728,12264,12872,13974,15206,16570,17331,17718,18085,19048,20151,20740,31528,33687,34976,
#Partially deleted in new
chrX	120526640	120575794	chrX:120526640-120575794	3	-	120526760	120574617	0	22	216,153,173,106,114,108,86,111,105,193,119,68,83,90,163,74,70,104,116,543,80,389,	0,3461,5781,7840,9189,10286,11483,12019,12627,13729,14961,16325,17086,17473,17840,18803,19906,20495,31283,33442,47910,48765,
#Partially deleted in new
chrX	120532335	120538547	chrX:120532335-120538547	0	-	120532335	120532335	8553170	5	259,106,114,108,424,	0,2145,3494,4591,5788,
#Partially deleted in new
chrX	120543745	120559943	chrX:120543745-120559943	0	-	120543745	120559800	789624	8	64,90,163,74,70,104,116,165,	0,368,735,1698,2801,3390,14178,16033,
#Deleted in new
chrX	120557916	120561302	chrX:120557916-120561302	0	-	120557916	120557916	8553170	3	123,543,170,	0,2166,3216,
#Partially deleted in new
chrX	120571175	120575524	chrX:120571175-120575524	0	-	120571175	120571175	8553170	3	825,80,119,	0,3375,4230,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	120594009	120606136	chrX:120594009-120606136	0	+	120594009	120594009	8553170	4	263,145,153,58,	0,914,11397,12069,
#Partially deleted in new
chrX	120594080	120611047	chrX:120594080-120611047	0	+	120594080	120594080	8553170	6	192,118,153,98,134,37,	0,870,11326,11998,14144,16930,
#Partially deleted in new
chrX	120603979	120612479	chrX:120603979-120612479	3	+	120604236	120612264	0	6	268,153,98,134,68,297,	0,1427,2099,4245,7031,8203,
#Partially deleted in new
chrX	120604320	120612312	chrX:120604320-120612312	1	+	120604853	120612264	0	6	547,153,98,134,68,130,	0,1086,1758,3904,6690,7862,
#Partially deleted in new
chrX	120605403	120612387	chrX:120605403-120612387	0	+	120605403	120605403	8553170	5	156,98,239,68,205,	0,675,2821,5607,6779,
#Partially deleted in new
chrX	120610886	120612388	chrX:120610886-120612388	0	+	120610886	120610886	8553170	2	192,206,	0,1296,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	120611328	120621074	chrX:120611328-120621074	0	+	120611328	120611328	8553170	2	127,505,	0,9241,
#Partially deleted in new
chrX	120625792	120630150	chrX:120625792-120630150	3	-	120626209	120627166	789624	2	1379,234,	0,4124,
#Partially deleted in new
chrX	120625930	120629995	chrX:120625930-120629995	1	-	120626209	120627166	789624	3	1241,172,79,	0,1325,3986,
#Partially deleted in new
chrX	120709060	120709392	chrX:120709060-120709392	7	-	120709060	120709060	16724991	2	218,76,	0,256,
#Deleted in new
chrX	120733093	120733396	chrX:120733093-120733396	7	+	120733093	120733093	16724991	1	303,	0,
#Deleted in new
chrX	120868610	120869807	chrX:120868610-120869807	7	-	120868610	120868610	16724991	1	1197,	0,
#Deleted in new
chrX	120872602	120875929	chrX:120872602-120875929	3	-	120873895	120875670	789624	3	138,156,1034,	0,1262,2293,
#Deleted in new
chrX	120876551	120876805	chrX:120876551-120876805	7	+	120876551	120876551	16724991	1	254,	0,
#Deleted in new
chrX	120877495	120878924	chrX:120877495-120878924	3	-	120878799	120878924	789624	2	135,156,	0,1273,
#Deleted in new
chrX	120930249	120932301	chrX:120930249-120932301	3	-	120930288	120932042	789624	2	164,1001,	0,1051,
#Deleted in new
chrX	120932900	120933152	chrX:120932900-120933152	7	+	120932900	120932900	16724991	1	252,	0,
#Deleted in new
chrX	120933839	120937158	chrX:120933839-120937158	3	-	120935149	120936903	789624	3	141,156,997,	0,1279,2322,
#Deleted in new
chrX	120937761	120938015	chrX:120937761-120938015	7	+	120937761	120937761	16724991	1	254,	0,
#Deleted in new
chrX	120938700	120942023	chrX:120938700-120942023	3	-	120940010	120941764	789624	3	141,156,1001,	0,1279,2322,
#Deleted in new
chrX	120942622	120942875	chrX:120942622-120942875	7	+	120942622	120942622	16724991	1	253,	0,
#Deleted in new
chrX	120943560	120946883	chrX:120943560-120946883	3	-	120944870	120946624	789624	3	141,156,1001,	0,1279,2322,
#Deleted in new
chrX	120947482	120947735	chrX:120947482-120947735	7	+	120947482	120947482	16724991	1	253,	0,
#Deleted in new
chrX	120948421	120951744	chrX:120948421-120951744	3	-	120949731	120951485	789624	3	141,156,1001,	0,1279,2322,
#Deleted in new
chrX	120952343	120952595	chrX:120952343-120952595	7	+	120952343	120952343	16724991	1	252,	0,
#Deleted in new
chrX	120953287	120956600	chrX:120953287-120956600	3	-	120954591	120956345	789624	3	135,156,997,	0,1273,2316,
#Deleted in new
chrX	120957226	120957479	chrX:120957226-120957479	7	+	120957226	120957226	16724991	1	253,	0,
#Deleted in new
chrX	120958164	120961487	chrX:120958164-120961487	3	-	120959474	120961228	789624	3	141,156,1001,	0,1279,2322,
#Deleted in new
chrX	120962086	120962339	chrX:120962086-120962339	7	+	120962086	120962086	16724991	1	253,	0,
#Deleted in new
chrX	120963025	120966348	chrX:120963025-120966348	3	-	120964335	120966089	789624	3	141,156,1001,	0,1279,2322,
#Deleted in new
chrX	120966947	120967199	chrX:120966947-120967199	7	+	120966947	120966947	16724991	1	252,	0,
#Deleted in new
chrX	120967885	120971208	chrX:120967885-120971208	3	-	120969195	120970949	789624	3	141,156,1001,	0,1279,2322,
#Deleted in new
chrX	120971807	120972059	chrX:120971807-120972059	7	+	120971807	120971807	16724991	1	252,	0,
#Deleted in new
chrX	120972745	120976068	chrX:120972745-120976068	3	-	120974055	120975809	789624	3	141,156,1001,	0,1279,2322,
#Deleted in new
chrX	120976667	120976919	chrX:120976667-120976919	7	+	120976667	120976667	16724991	1	252,	0,
#Deleted in new
chrX	120977605	120980928	chrX:120977605-120980928	3	-	120978915	120980669	789624	3	141,156,1001,	0,1279,2322,
#Deleted in new
chrX	120981528	120981779	chrX:120981528-120981779	7	+	120981528	120981528	16724991	1	251,	0,
#Deleted in new
chrX	120982475	120985788	chrX:120982475-120985788	3	-	120983775	120985529	789624	3	131,156,1001,	0,1269,2312,
#Deleted in new
chrX	120986387	120986639	chrX:120986387-120986639	7	+	120986387	120986387	16724991	1	252,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	121024963	121026563	chrX:121024963-121026563	7	-	121024963	121024963	16724991	1	1600,	0,
#Deleted in new
chrX	121047587	121050080	chrX:121047587-121050080	3	+	121047684	121049361	789624	1	2493,	0,
#Partially deleted in new
chrX	121203181	121205014	chrX:121203181-121205014	7	-	121203181	121203181	16724991	1	1833,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	121370971	121371053	chrX:121370971-121371053	3	+	121370971	121370971	5263520	1	82,	0,
#Partially deleted in new
chrX	121863697	121864196	chrX:121863697-121864196	7	-	121863697	121863697	16724991	1	499,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	121871868	121876865	chrX:121871868-121876865	3	+	121871868	121871868	8553170	1	4997,	0,
#Deleted in new
chrX	122010975	122011612	chrX:122010975-122011612	7	-	122010975	122010975	16724991	2	151,100,	0,537,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	122242007	122242616	chrX:122242007-122242616	3	+	122242007	122242007	8553170	1	609,	0,
#Deleted in new
chrX	122538252	122539460	chrX:122538252-122539460	7	+	122538252	122538252	16724991	1	1208,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	122840425	122840645	chrX:122840425-122840645	3	+	122840425	122840425	8553170	1	220,	0,
#Partially deleted in new
chrX	123116106	123117781	chrX:123116106-123117781	7	-	123116106	123116106	16724991	1	1675,	0,
#Partially deleted in new
chrX	123184152	123204683	chrX:123184152-123204683	1	+	123184535	123204419	789624	5	67,127,159,147,284,	0,365,1679,18483,20247,
#Partially deleted in new
chrX	123184242	123490905	chrX:123184242-123490905	1	+	123184535	123483044	789624	16	402,159,240,188,54,162,168,105,108,207,377,199,248,115,248,2193,	0,1589,69060,141783,170667,210725,214393,218751,219169,220465,233159,243698,280622,281431,298556,304470,
#Partially deleted in new
chrX	123184298	123204683	chrX:123184298-123204683	1	+	123184535	123204419	789624	4	346,159,147,284,	0,1533,18337,20101,
#Partially deleted in new
chrX	123184370	123488736	chrX:123184370-123488736	1	+	123184535	123480098	789624	17	274,159,240,188,54,162,168,105,108,207,377,199,248,115,115,248,24,	0,1461,68932,141655,170539,210597,214265,218623,219041,220337,233031,243570,280494,281303,295692,298428,304342,
#Partially deleted in new
chrX	123184482	123483046	chrX:123184482-123483046	3	+	123184535	123483044	789624	15	162,159,240,188,54,162,168,105,108,207,377,199,248,115,248,	0,1349,68820,141543,170427,210485,214153,218511,218929,220225,232919,243458,280382,281191,298316,
#Partially deleted in new
chrX	123184482	123490915	chrX:123184482-123490915	1	+	123184535	123483044	789624	16	162,159,240,188,54,162,168,105,108,207,377,199,248,115,248,2203,	0,1349,68820,141543,170427,210485,214153,218511,218929,220225,232919,243458,280382,295580,298316,304230,
#Partially deleted in new
chrX	123184559	123253702	chrX:123184559-123253702	0	+	123184559	123184559	8553170	3	85,159,400,	0,1272,68743,
#Partially deleted in new
chrX	123354908	123361323	chrX:123354908-123361323	0	+	123354908	123354908	8553170	4	55,274,96,81,	0,3437,3796,6334,
#Partially deleted in new
chrX	123482722	123488942	chrX:123482722-123488942	0	+	123482722	123482722	8553170	2	324,230,	0,5990,
#Partially deleted in new
chrX	123514472	123514872	chrX:123514472-123514872	7	+	123514472	123514472	16724991	1	400,	0,
#Deleted in new
chrX	123558349	123558584	chrX:123558349-123558584	7	+	123558349	123558349	16724991	1	235,	0,
#Partially deleted in new
chrX	123561641	123562966	chrX:123561641-123562966	7	+	123561641	123561641	16724991	1	1325,	0,
#Partially deleted in new
chrX	123600560	123621159	chrX:123600560-123621159	0	-	123610935	123621159	789624	9	778,46,77,158,70,138,36,59,3,	0,10357,10879,12838,13078,13491,18840,20346,20596,
#Partially deleted in new
chrX	123600561	123733054	chrX:123600561-123733054	3	-	123610935	123733022	789624	39	777,46,77,158,70,138,36,59,431,103,179,185,132,129,158,142,276,165,180,118,97,81,94,85,102,131,42,196,173,156,93,167,134,122,71,52,92,59,103,	0,10356,10878,12837,13077,13490,18839,20345,20595,22196,22543,23225,23498,23979,25350,25959,27131,31126,32299,33391,35517,37481,38372,39976,44013,44217,44772,65080,66544,67597,71107,85986,95459,96159,97119,102892,106296,112288,132390,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	123600568	123622845	chrX:123600568-123622845	0	-	123610935	123622845	789624	10	3180,46,77,158,70,138,117,59,431,88,	0,10349,10871,12830,13070,13483,18832,20338,20588,22189,
#Partially deleted in new
chrX	123600799	123614153	chrX:123600799-123614153	0	-	123600799	123600799	8553170	2	539,102,	0,13252,
#Partially deleted in new
chrX	123601208	123620205	chrX:123601208-123620205	0	-	123601208	123601208	8553170	8	130,46,77,158,70,138,36,113,	0,9709,10231,12190,12430,12843,18192,18884,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	123601879	123623328	chrX:123601879-123623328	1	-	123610935	123623249	789624	11	1869,46,77,158,70,138,36,59,431,103,224,	0,9038,9560,11519,11759,12172,17521,19027,19277,20878,21225,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	123602099	123621579	chrX:123602099-123621579	0	-	123620891	123621579	789624	9	1649,46,77,158,70,138,36,591,423,	0,8818,9340,11299,11539,11952,17301,18275,19057,
#Deleted in new
chrX	123603138	123603931	chrX:123603138-123603931	7	+	123603138	123603138	16724991	1	793,	0,
#Partially deleted in new
chrX	123603448	123613554	chrX:123603448-123613554	0	-	123610935	123613554	789624	4	300,40,77,156,	0,7469,7991,9950,
#Partially deleted in new
chrX	123610197	123733056	chrX:123610197-123733056	1	-	123610935	123733022	789624	39	96,46,77,158,70,138,36,59,431,103,179,185,132,129,158,142,276,165,180,118,97,81,94,85,102,131,42,196,173,156,93,167,134,122,71,52,92,59,105,	0,720,1242,3201,3441,3854,9203,10709,10959,12560,12907,13589,13862,14343,15714,16323,17495,21490,22663,23755,25881,27845,28736,30340,34377,34581,35136,55444,56908,57961,61471,76350,85823,86523,87483,93256,96660,102652,122754,
#Partially deleted in new
chrX	123610197	123620948	chrX:123610197-123620948	0	-	123610935	123620948	789624	8	96,40,77,158,70,138,36,42,	0,720,1242,3201,3441,3854,9203,10709,
#Partially deleted in new
chrX	123610920	123697687	chrX:123610920-123697687	1	-	123610935	123697687	789624	34	43,77,158,70,138,36,59,431,103,179,185,132,129,158,142,276,165,180,118,97,81,94,85,102,131,42,196,173,156,93,167,134,115,7,	0,519,2478,2718,3131,8480,9986,10236,11837,12184,12866,13139,13620,14991,15600,16772,20767,21940,23032,25158,27122,28013,29617,33654,33858,34413,54721,56185,57238,60748,75627,85100,85800,86760,
#Partially deleted in new
chrX	123611499	123620670	chrX:123611499-123620670	0	-	123611499	123611499	8553170	6	17,158,70,138,36,483,	0,1899,2139,2552,7901,8688,
#Deleted in new
chrX	123613529	123620178	chrX:123613529-123620178	0	-	123613529	123613529	8553170	4	27,70,138,778,	0,109,522,5871,
#Deleted in new
chrX	123620326	123621181	chrX:123620326-123621181	0	-	123620326	123620326	8553170	2	639,25,	0,830,
#Partially deleted in new
chrX	123621474	123623042	chrX:123621474-123623042	0	-	123621474	123621474	8553170	2	113,285,	0,1283,
#Partially deleted in new
chrX	123621518	123626636	chrX:123621518-123626636	0	-	123621518	123626636	789624	9	69,103,179,66,185,132,129,158,116,	0,1239,1586,2125,2268,2541,3022,4393,5002,
#Partially deleted in new
chrX	123621522	123623625	chrX:123621522-123623625	0	-	123621522	123621522	8553170	3	65,103,521,	0,1235,1582,
#Deleted in new
chrX	123623512	123624609	chrX:123623512-123624609	0	-	123623512	123623512	8553170	3	459,132,69,	0,547,1028,
#Partially deleted in new
chrX	123668307	123733037	chrX:123668307-123733037	0	-	123696817	123733022	789624	10	7,93,167,134,115,71,52,92,59,86,	0,3361,18240,27713,28413,29373,35146,38550,44542,64644,
#Partially deleted in new
chrX	123697725	123712904	chrX:123697725-123712904	0	-	123697725	123697725	8553170	4	26,52,96,55,	0,5728,9128,15124,
#Partially deleted in new
chrX	123765300	123765686	chrX:123765300-123765686	7	+	123765300	123765300	16724991	1	386,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	123772077	123772139	chrX:123772077-123772139	3	-	123772077	123772077	8553170	1	62,	0,
#Deleted in new
chrX	123785008	123785451	chrX:123785008-123785451	7	+	123785008	123785008	16724991	1	443,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	123811330	123811587	chrX:123811330-123811587	3	-	123811330	123811330	8553170	1	257,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	123857061	123857163	chrX:123857061-123857163	3	-	123857061	123857061	8553170	1	102,	0,
#Partially deleted in new
chrX	123859723	123885711	chrX:123859723-123885711	0	+	123885662	123885711	789624	3	182,127,81,	0,443,25907,
#Partially deleted in new
chrX	123859763	123907020	chrX:123859763-123907020	0	+	123859763	123859763	8553170	6	142,100,79,43,201,33,	0,28855,31474,32967,40729,47224,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	123859811	123913976	chrX:123859811-123913976	3	+	123885662	123907181	0	7	94,909,100,79,43,201,6989,	0,25819,28807,31426,32919,40681,47176,
#Partially deleted in new
chrX	123859826	123900566	chrX:123859826-123900566	0	+	123859826	123859826	8553170	6	79,127,100,72,43,74,	0,340,28792,31411,32904,40666,
#Partially deleted in new
chrX	123859876	123907251	chrX:123859876-123907251	0	+	123859876	123859876	8553170	6	29,127,100,43,201,264,	0,290,28742,32854,40616,47111,
#Partially deleted in new
chrX	123859877	123886130	chrX:123859877-123886130	0	+	123885662	123886130	789624	2	28,500,	0,25753,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	123860026	123913979	chrX:123860026-123913979	1	+	123885662	123907181	0	7	267,909,100,79,43,201,6992,	0,25604,28592,31211,32704,40466,46961,
#Partially deleted in new
chrX	123860194	123906998	chrX:123860194-123906998	0	+	123860194	123860194	789624	6	99,100,79,43,201,11,	0,28424,31043,32536,40298,46793,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	123860271	123913965	chrX:123860271-123913965	1	+	123885662	123907181	0	7	274,909,100,79,43,201,6978,	0,25359,28347,30966,32459,40221,46716,
#Partially deleted in new
chrX	123860453	123888683	chrX:123860453-123888683	0	+	123860453	123860453	8553170	2	92,65,	0,28165,
#Deleted in new
chrX	123874458	123874565	chrX:123874458-123874565	3	+	123874458	123874458	8553170	1	107,	0,
#Deleted in new
chrX	123878589	123879296	chrX:123878589-123879296	7	-	123878589	123878589	16724991	1	707,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	123912759	123913615	chrX:123912759-123913615	0	+	123912759	123912759	8553170	2	257,371,	0,485,
#Deleted in new
chrX	123959232	123961341	chrX:123959232-123961341	3	-	123959232	123959232	789624	2	173,153,	0,1956,
#Partially deleted in new
chrX	123960211	124031048	chrX:123960211-124031048	0	+	124022627	124031048	789624	4	77,141,79,88,	0,62319,65628,70749,
#Partially deleted in new
chrX	123960518	124101498	chrX:123960518-124101498	1	+	124022627	124100597	0	35	348,65,141,79,165,97,77,205,152,74,124,99,80,108,112,118,104,93,90,204,71,88,81,93,175,140,102,149,129,224,190,111,127,78,925,	0,60848,62012,65321,70442,77008,82050,84645,86835,88486,89667,90602,90796,95609,97347,100705,101252,102383,102597,103329,105357,105656,105837,108045,110630,115813,117438,120861,122902,126028,130056,130335,133499,134853,140055,
#Partially deleted in new
chrX	123960518	124062907	chrX:123960518-124062907	0	+	124022627	124062907	789624	17	348,141,79,165,97,77,205,152,74,124,99,80,108,112,118,104,6,	0,62012,65321,70442,77008,82050,84645,86835,88486,89667,90602,90796,95609,97347,100705,101252,102383,
#Partially deleted in new
chrX	123960559	124062994	chrX:123960559-124062994	0	+	123960559	123960559	8553170	7	307,22,108,112,118,104,93,	0,61971,95568,97306,100664,101211,102342,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	123960694	124422664	chrX:123960694-124422664	0	+	123960694	123960694	8553170	4	172,281,269,267,	0,42772,451127,461703,
#Partially deleted in new
chrX	123960863	124025915	chrX:123960863-124025915	0	+	124022627	124025915	789624	3	79,141,76,	0,61667,64976,
#Partially deleted in new
chrX	123961313	124102656	chrX:123961313-124102656	3	+	124022627	124100597	0	34	122,71,141,79,165,97,77,205,152,74,124,99,80,108,112,118,104,93,90,204,71,88,81,93,175,140,102,149,129,224,190,127,78,2083,	0,472,61217,64526,69647,76213,81255,83850,86040,87691,88872,89807,90001,94814,96552,99910,100457,101588,101802,102534,104562,104861,105042,107250,109835,115018,116643,120066,122107,125233,129261,132704,134058,139260,
#Partially deleted in new
chrX	123961317	124042645	chrX:123961317-124042645	0	+	124022627	124042645	789624	7	118,65,141,79,165,97,77,	0,60049,61213,64522,69643,76209,81251,
#Partially deleted in new
chrX	123961717	124102656	chrX:123961717-124102656	1	+	124022627	124100597	0	33	139,141,79,165,97,77,205,152,74,124,99,80,108,112,118,104,93,90,204,71,88,81,93,175,140,102,149,129,224,190,127,78,2083,	0,60813,64122,69243,75809,80851,83446,85636,87287,88468,89403,89597,94410,96148,99506,100053,101184,101398,102130,104158,104457,104638,106846,109431,114614,116239,119662,121703,124829,128857,132300,133654,138856,
#Partially deleted in new
chrX	123961737	124100902	chrX:123961737-124100902	1	+	124022627	124100597	0	35	119,65,141,79,165,97,77,205,152,74,124,99,80,108,112,118,104,93,90,204,71,88,81,93,175,140,102,149,129,224,190,111,127,78,329,	0,59629,60793,64102,69223,75789,80831,83426,85616,87267,88448,89383,89577,94390,96128,99486,100033,101164,101378,102110,104138,104437,104618,106826,109411,114594,116219,119642,121683,124809,128837,129116,132280,133634,138836,
#Partially deleted in new
chrX	123961738	124100902	chrX:123961738-124100902	1	+	124022627	124100597	0	34	118,65,141,79,165,97,77,205,152,74,124,99,80,108,112,118,104,93,90,204,71,88,81,93,175,140,102,149,129,224,190,127,78,329,	0,59628,60792,64101,69222,75788,80830,83425,85615,87266,88447,89382,89576,94389,96127,99485,100032,101163,101377,102109,104137,104436,104617,106825,109410,114593,116218,119641,121682,124808,128836,132279,133633,138835,
#Partially deleted in new
chrX	123961738	124045208	chrX:123961738-124045208	0	+	124022627	124026618	789624	8	118,141,79,123,165,97,77,45,	0,60792,64101,64826,69222,75788,80830,83425,
#Partially deleted in new
chrX	123961774	124063991	chrX:123961774-124063991	0	+	123961774	123961774	8553170	9	82,22,108,112,118,104,93,90,144,	0,60756,94353,96091,99449,99996,101127,101341,102073,
#Partially deleted in new
chrX	123961822	124063205	chrX:123961822-124063205	0	+	123961822	123961822	8553170	9	34,28,22,108,112,118,104,93,90,	0,256,60708,94305,96043,99401,99948,101079,101293,
#Partially deleted in new
chrX	123962032	124045208	chrX:123962032-124045208	0	+	124022627	124045208	789624	7	74,141,79,165,97,77,45,	0,60498,63807,68928,75494,80536,83131,
#Partially deleted in new
chrX	123962093	124045324	chrX:123962093-124045324	0	+	124022627	124045324	789624	8	13,65,141,79,165,97,77,161,	0,59273,60437,63746,68867,75433,80475,83070,
#Partially deleted in new
chrX	123963169	124037585	chrX:123963169-124037585	0	+	124022627	124037585	789624	5	232,141,79,165,59,	0,59361,62670,67791,74357,
#Partially deleted in new
chrX	124093912	124095495	chrX:124093912-124095495	0	+	124093912	124093912	8553170	2	232,124,	0,1459,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	124173000	124174459	chrX:124173000-124174459	7	-	124173000	124173000	16724991	1	1459,	0,
#Deleted in new
chrX	124197742	124197849	chrX:124197742-124197849	3	+	124197742	124197742	8553170	1	107,	0,
#Partially deleted in new
chrX	124204498	124205806	chrX:124204498-124205806	7	-	124204498	124204498	16724991	2	507,500,	0,808,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	124227867	124373197	chrX:124227867-124373197	0	+	124227867	124227867	8553170	6	303,99,96,64,145,1847,	0,6705,18374,137893,142308,143483,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	124246248	124336840	chrX:124246248-124336840	0	+	124246248	124246248	8553170	2	89,1489,	0,89103,
#Partially deleted in new
chrX	124280529	124281422	chrX:124280529-124281422	7	+	124280529	124280529	16724991	1	893,	0,
#Deleted in new
chrX	124326174	124326258	chrX:124326174-124326258	7	-	124326174	124326174	16724991	1	84,	0,
#Deleted in new
chrX	124332659	124336862	chrX:124332659-124336862	3	+	124332917	124335062	789624	1	4203,	0,
#Partially deleted in new
chrX	124346343	124373155	chrX:124346343-124373155	3	+	124346642	124371391	0	4	436,64,145,1805,	0,19417,23832,25007,
#Partially deleted in new
chrX	124346390	124372845	chrX:124346390-124372845	0	+	124346642	124367622	789624	5	389,64,72,145,1495,	0,19370,21199,23785,24960,
#Partially deleted in new
chrX	124346524	124371488	chrX:124346524-124371488	1	+	124346642	124371391	0	4	255,64,136,138,	0,19236,23651,24826,
#Partially deleted in new
chrX	124346588	124371488	chrX:124346588-124371488	1	+	124346642	124370282	0	4	169,64,90,138,	0,19172,23642,24762,
#Partially deleted in new
chrX	124346588	124371488	chrX:124346588-124371488	0	+	124346588	124346588	8553170	3	191,145,138,	0,23587,24762,
#Partially deleted in new
chrX	124346588	124371488	chrX:124346588-124371488	0	+	124346588	124346588	8553170	3	191,90,138,	0,23642,24762,
#Partially deleted in new
chrX	124375902	124963817	chrX:124375902-124963817	1	-	124380535	124963753	789624	31	5392,143,1221,388,297,236,173,511,367,155,233,250,144,268,262,120,217,147,24,186,201,195,102,211,200,153,239,241,57,261,281,	0,6767,7731,9774,16149,29128,30414,44408,46369,77434,105829,121113,127657,144614,147461,153961,170971,185768,187846,189472,265888,269240,270806,276011,277681,295780,329110,361054,518393,520078,587634,
#Partially deleted in new
chrX	124375907	124963817	chrX:124375907-124963817	3	-	124380535	124963753	789624	32	5387,143,1221,388,297,236,173,511,367,155,233,21,250,144,268,262,120,217,147,24,186,201,195,102,211,200,153,239,241,57,261,281,	0,6762,7726,9769,16144,29123,30409,44403,46364,77429,105824,111301,121108,127652,144609,147456,153956,170966,185763,187841,189467,265883,269235,270801,276006,277676,295775,329105,361049,518388,520073,587629,
#Partially deleted in new
chrX	124453458	124497143	chrX:124453458-124497143	0	-	124453458	124453458	8553170	4	33,233,21,128,	0,28273,33750,43557,
#Deleted in new
chrX	124688503	124688838	chrX:124688503-124688838	7	-	124688503	124688503	16724991	1	335,	0,
#Deleted in new
chrX	125203804	125204338	chrX:125203804-125204338	7	-	125203804	125203804	16724991	1	534,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	125320119	125325214	chrX:125320119-125325214	3	+	125320119	125323101	789624	1	5095,	0,
#Deleted in new
chrX	125326896	125328021	chrX:125326896-125328021	7	-	125326896	125326896	16724991	1	1125,	0,
#Partially deleted in new
chrX	126004445	126006118	chrX:126004445-126006118	3	-	126004445	126004445	8553170	1	1673,	0,
#Partially deleted in new
chrX	126163498	126166097	chrX:126163498-126166097	3	-	126164532	126165924	789624	1	2599,	0,
#Partially deleted in new
chrX	126471704	126472403	chrX:126471704-126472403	7	+	126471704	126471704	16724991	1	699,	0,
#Partially deleted in new
chrX	126472727	126472884	chrX:126472727-126472884	7	+	126472727	126472727	16724991	1	157,	0,
#Partially deleted in new
chrX	126472884	126473281	chrX:126472884-126473281	7	+	126472884	126472884	16724991	1	397,	0,
#Partially deleted in new
chrX	126502866	126503155	chrX:126502866-126503155	7	-	126502866	126502866	16724991	1	289,	0,
#Partially deleted in new
chrX	126549382	126552851	chrX:126549382-126552851	3	-	126551216	126552608	789624	2	1725,1657,	0,1812,
#Deleted in new
chrX	126729103	126730226	chrX:126729103-126730226	7	+	126729103	126729103	16724991	1	1123,	0,
#Deleted in new
chrX	126819763	126821786	chrX:126819763-126821786	3	+	126819843	126821535	789624	2	100,1128,	0,895,
#Deleted in new
chrX	127390341	127392526	chrX:127390341-127392526	7	+	127390341	127390341	16724991	2	1663,472,	0,1713,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	127392759	127394771	chrX:127392759-127394771	3	+	127392759	127392759	8553170	1	2012,	0,
#Deleted in new
chrX	127623409	127623530	chrX:127623409-127623530	7	-	127623409	127623409	16724991	1	121,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	127660630	127662530	chrX:127660630-127662530	3	-	127660630	127660630	8553170	1	1900,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	127728733	127730858	chrX:127728733-127730858	7	-	127728733	127728733	16724991	3	613,214,340,	0,1338,1785,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	127796123	127796733	chrX:127796123-127796733	7	+	127796123	127796123	16724991	2	199,115,	0,495,
#Partially deleted in new
chrX	128050961	128052398	chrX:128050961-128052398	3	-	128051075	128052206	789624	1	1437,	0,
#Deleted in new
chrX	128098031	128098529	chrX:128098031-128098529	7	-	128098031	128098031	16724991	1	498,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	128122733	128123496	chrX:128122733-128123496	7	+	128122733	128122733	16724991	2	37,679,	0,84,
#Deleted in new
chrX	128127089	128128212	chrX:128127089-128128212	7	-	128127089	128127089	16724991	1	1123,	0,
#Deleted in new
chrX	128313280	128314048	chrX:128313280-128314048	7	+	128313280	128313280	16724991	1	768,	0,
#Partially deleted in new
chrX	128323619	128600468	chrX:128323619-128600468	3	-	128323619	128323619	8553170	4	55,64,204,158,	0,12689,111036,276691,
#Partially deleted in new
chrX	128440928	128441785	chrX:128440928-128441785	7	+	128440928	128440928	16724991	1	857,	0,
#Deleted in new
chrX	128714505	128715790	chrX:128714505-128715790	7	+	128714505	128714505	16724991	1	1285,	0,
#Partially deleted in new
chrX	128838440	128838834	chrX:128838440-128838834	7	-	128838440	128838440	16724991	1	394,	0,
#Partially deleted in new
chrX	129041535	129043183	chrX:129041535-129043183	7	-	129041535	129041535	16724991	1	1648,	0,
#Deleted in new
chrX	129408381	129408621	chrX:129408381-129408621	7	+	129408381	129408381	16724991	1	240,	0,
#Partially deleted in new
chrX	129446500	129523464	chrX:129446500-129523464	0	-	129446500	129446500	8553170	23	801,142,213,119,133,123,485,120,149,133,153,122,227,110,69,132,156,180,101,101,167,87,268,	0,1801,19019,19343,22272,24703,34200,40517,42436,43559,45440,50249,51344,53231,58233,59579,61440,65303,69186,69393,69830,71860,76696,
#Partially deleted in new
chrX	129446504	129523500	chrX:129446504-129523500	3	-	129448308	129523370	789624	25	797,142,213,119,133,123,114,111,120,149,133,153,36,122,227,110,69,132,156,180,101,101,167,87,304,	0,1797,19015,19339,22268,24699,34196,34570,40513,42432,43555,45436,46535,50245,51340,53227,58229,59575,61436,65299,69182,69389,69826,71856,76692,
#Partially deleted in new
chrX	129446505	129523485	chrX:129446505-129523485	1	-	129447161	129523370	789624	24	728,111,213,119,133,123,114,111,120,149,133,153,122,227,110,69,132,156,180,101,101,167,87,289,	0,1827,19014,19338,22267,24698,34195,34569,40512,42431,43554,45435,50244,51339,53226,58228,59574,61435,65298,69181,69388,69825,71855,76691,
#Partially deleted in new
chrX	129446845	129523405	chrX:129446845-129523405	1	-	129447161	129523370	789624	25	388,111,213,119,133,123,114,111,120,149,133,153,36,122,227,110,69,132,156,180,101,101,167,87,209,	0,1487,18674,18998,21927,24358,33855,34229,40172,42091,43214,45095,46194,49904,50999,52886,57888,59234,61095,64958,68841,69048,69485,71515,76351,
#Partially deleted in new
chrX	129508054	129523246	chrX:129508054-129523246	0	-	129508054	129508054	8553170	6	42,180,101,101,87,50,	0,3749,7632,7839,10306,15142,
#Deleted in new
chrX	129518575	129518647	chrX:129518575-129518647	3	+	129518575	129518575	8553170	1	72,	0,
#Partially deleted in new
chrX	129539848	129558979	chrX:129539848-129558979	0	+	129539848	129539848	8553170	8	91,80,39,270,111,90,121,140,	0,5109,8714,9799,17476,18012,18784,18991,
#Partially deleted in new
chrX	129540274	129592561	chrX:129540274-129592561	1	+	129540439	129590270	0	23	204,80,80,39,111,90,121,162,102,115,117,188,112,110,136,111,166,236,117,85,128,112,2416,	0,469,4683,8288,17050,17586,18358,18565,20275,20904,22109,22324,25497,26979,28989,34865,35622,36042,46727,47904,48611,49570,49871,
#Partially deleted in new
chrX	129540274	129592561	chrX:129540274-129592561	3	+	129540439	129590270	0	24	204,80,80,39,111,90,121,162,102,115,117,188,112,110,136,111,166,236,24,117,85,128,112,2416,	0,469,4683,8288,17050,17586,18358,18565,20275,20904,22109,22324,25497,26979,28989,34865,35622,36042,44069,46727,47904,48611,49570,49871,
#Partially deleted in new
chrX	129540747	129592537	chrX:129540747-129592537	0	+	129540747	129553249	789624	25	76,80,39,38,53,111,90,121,162,102,115,117,188,112,110,136,111,166,236,24,117,85,128,112,2392,	0,4210,7815,12488,13646,16577,17113,17885,18092,19802,20431,21636,21851,25024,26506,28516,34392,35149,35569,43596,46254,47431,48138,49097,49398,
#Partially deleted in new
chrX	129557860	129592338	chrX:129557860-129592338	0	+	129557860	129575689	789624	19	90,121,162,102,115,117,188,112,110,136,111,66,236,24,117,85,128,112,2193,	0,772,979,2689,3318,4523,4738,7911,9393,11403,17279,17793,18456,26483,29141,30318,31025,31984,32285,
#Partially deleted in new
chrX	129561243	129592338	chrX:129561243-129592338	0	+	129561243	129575689	789624	17	50,117,188,112,110,136,111,66,166,236,24,117,85,128,128,112,2193,	0,1140,1355,4528,6010,8020,13896,14410,14653,15073,23100,25758,26935,27642,27993,28601,28902,
#Deleted in new
chrX	129589588	129590633	chrX:129589588-129590633	0	+	129589588	129589588	8553170	2	368,488,	0,557,
#Deleted in new
chrX	129645258	129654937	chrX:129645258-129654937	3	-	129648625	129654630	789624	3	2659,172,374,	0,3362,9305,
#Partially deleted in new
chrX	129738973	129746863	chrX:129738973-129746863	1	+	129739213	129746743	789624	6	289,74,111,64,105,269,	0,3134,4987,6229,7262,7621,
#Partially deleted in new
chrX	129739021	129769538	chrX:129739021-129769538	3	+	129739213	129768485	789624	21	241,74,111,64,105,87,147,102,82,196,90,110,78,72,61,70,105,60,77,90,1248,	0,3086,4939,6181,7214,7573,8585,11446,12723,13128,14137,15450,16272,17462,20158,21490,22150,22984,23672,28581,29269,
#Partially deleted in new
chrX	129779978	129788150	chrX:129779978-129788150	0	+	129779978	129779978	8553170	2	176,176,	0,7996,
#Partially deleted in new
chrX	129779983	129795201	chrX:129779983-129795201	3	+	129780097	129793832	789624	8	171,96,147,142,149,210,151,1560,	0,7991,8447,10956,12344,12643,13005,13658,
#Partially deleted in new
chrX	129794993	129796963	chrX:129794993-129796963	3	+	129794993	129794993	8553170	3	118,159,49,	0,523,1921,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	129796490	129796783	chrX:129796490-129796783	3	-	129796490	129796490	8553170	1	293,	0,
#Partially deleted in new
chrX	129803287	129843884	chrX:129803287-129843884	3	-	129806369	129841945	789624	11	3199,97,104,103,49,138,159,161,302,68,189,	0,7617,8118,9430,10389,11370,20391,25693,38491,39971,40408,
#Partially deleted in new
chrX	129805328	129843460	chrX:129805328-129843460	1	-	129806369	129841945	789624	10	1158,97,104,103,49,138,159,161,302,202,	0,5576,6077,7389,8348,9329,18350,23652,36450,37930,
#Partially deleted in new
chrX	129811446	129841824	chrX:129811446-129841824	0	-	129811446	129841824	789624	6	63,103,49,159,161,46,	0,1271,2230,12232,17534,30332,
#Partially deleted in new
chrX	129814770	129843909	chrX:129814770-129843909	0	-	129814770	129841945	789624	5	25,159,161,178,214,	0,8908,14210,27008,28925,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	129822887	129823788	chrX:129822887-129823788	0	-	129822887	129822887	8553170	2	515,110,	0,791,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	129869063	129957528	chrX:129869063-129957528	3	-	129869063	129869063	8553170	4	233,87,138,68,	0,39403,60694,88397,
#Partially deleted in new
chrX	129871308	129877567	chrX:129871308-129877567	7	+	129871308	129871308	16724991	3	1558,748,604,	0,4008,5655,
#Partially deleted in new
chrX	129906120	129929761	chrX:129906120-129929761	1	+	129906210	129929608	789624	14	116,76,71,65,143,120,95,124,78,394,401,194,100,426,	0,1246,1939,2549,4887,13054,13274,14336,14554,15073,18674,19798,20119,23215,
#Partially deleted in new
chrX	129906182	129929752	chrX:129906182-129929752	3	+	129906210	129929608	789624	15	54,76,71,65,143,156,120,95,124,78,394,401,194,100,417,	0,1184,1877,2487,4825,5583,12992,13212,14274,14492,15011,18612,19736,20057,23153,
#Partially deleted in new
chrX	129913343	129924910	chrX:129913343-129924910	0	+	129913362	129924910	789624	7	52,120,95,124,78,394,116,	0,5831,6051,7113,7331,7850,11451,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	129920712	129923063	chrX:129920712-129923063	0	+	129920712	129920712	8553170	2	40,1870,	0,481,
#Partially deleted in new
chrX	129981106	130005317	chrX:129981106-130005317	0	+	130005231	130005317	789624	3	227,111,130,	0,566,24081,
#Partially deleted in new
chrX	129981162	130013178	chrX:129981162-130013178	0	+	130005231	130010559	789624	6	171,80,130,156,91,229,	0,510,24025,29345,31415,31787,
#Partially deleted in new
chrX	129982609	130057663	chrX:129982609-130057663	3	+	130005231	130056136	789624	13	153,130,91,3264,166,81,390,227,167,146,78,157,1810,	0,22578,29968,30340,38375,40287,42380,46025,54757,56527,68107,69250,73244,
#Partially deleted in new
chrX	130005187	130058083	chrX:130005187-130058083	1	+	130005231	130056136	789624	12	130,91,3264,166,81,390,227,167,146,78,157,2230,	0,7390,7762,15797,17709,19802,23447,32179,33949,45529,46672,50666,
#Partially deleted in new
chrX	130013972	130057626	chrX:130013972-130057626	0	+	130013972	130056136	789624	11	2241,166,81,390,227,222,167,146,78,157,1773,	0,7012,8924,11017,14662,20482,23394,25164,36744,37887,41881,
#Partially deleted in new
chrX	130014466	130028861	chrX:130014466-130028861	0	+	130014466	130028861	789624	4	1747,166,81,227,	0,6518,8430,14168,
#Partially deleted in new
chrX	130064873	130110716	chrX:130064873-130110716	3	-	130066720	130081330	789624	9	2652,378,193,84,192,93,172,284,97,	0,4426,6166,6462,7352,9175,9707,16382,45746,
#Partially deleted in new
chrX	130064927	130110495	chrX:130064927-130110495	1	-	130066720	130081330	789624	9	2598,378,193,84,192,93,172,284,171,	0,4372,6112,6408,7298,9121,9653,16328,45397,
#Partially deleted in new
chrX	130064933	130081432	chrX:130064933-130081432	1	-	130066720	130081330	789624	10	2546,45,183,193,193,84,192,93,172,177,	0,2547,4366,4551,6106,6402,7292,9115,9647,16322,
#Partially deleted in new
chrX	130074104	130110361	chrX:130074104-130110361	0	-	130074104	130081276	789624	5	37,172,57,103,37,	0,476,7151,7332,36220,
#Partially deleted in new
chrX	130129361	130165879	chrX:130129361-130165879	1	-	130129556	130165656	0	16	267,197,125,143,141,89,108,109,77,85,91,131,125,100,131,329,	0,608,2313,3951,6683,7281,7716,9231,10433,11171,16117,18131,18390,20107,25794,36189,
#Partially deleted in new
chrX	130129361	130165680	chrX:130129361-130165680	1	-	130129556	130165656	0	8	267,197,125,143,141,89,108,130,	0,608,2313,3951,6683,7281,7716,36189,
#Partially deleted in new
chrX	130129361	130165664	chrX:130129361-130165664	0	-	130137517	130165656	0	17	267,197,125,143,141,89,108,203,109,77,85,91,131,125,100,143,114,	0,608,2313,3951,6683,7281,7716,7961,9231,10433,11171,16117,18131,18390,20107,27099,36189,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	130129361	130138040	chrX:130129361-130138040	1	-	130129556	130137135	789624	7	267,197,125,143,141,89,963,	0,608,2313,3951,6683,7281,7716,
#Partially deleted in new
chrX	130129361	130165664	chrX:130129361-130165664	0	-	130149542	130165656	789624	16	267,197,125,143,141,89,108,203,109,77,85,91,131,125,100,114,	0,608,2313,3951,6683,7281,7716,7961,9231,10433,11171,16117,18131,18390,20107,36189,
#Partially deleted in new
chrX	130129364	130165887	chrX:130129364-130165887	1	-	130137517	130165656	0	17	264,197,125,143,141,89,108,203,109,77,85,91,131,125,100,143,337,	0,605,2310,3948,6680,7278,7713,7958,9228,10430,11168,16114,18128,18387,20104,27096,36186,
#Partially deleted in new
chrX	130129369	130165887	chrX:130129369-130165887	3	-	130129556	130165656	0	16	259,197,125,143,141,89,108,109,77,85,91,131,125,100,143,337,	0,600,2305,3943,6675,7273,7708,9223,10425,11163,16109,18123,18382,20099,27091,36181,
#Partially deleted in new
chrX	130136664	130147928	chrX:130136664-130147928	0	-	130136664	130136664	8553170	8	67,108,109,77,85,91,131,177,	0,413,1928,3130,3868,8814,10828,11087,
#Partially deleted in new
chrX	130147608	130165759	chrX:130147608-130165759	0	-	130155265	130165656	789624	6	15,125,100,131,143,209,	0,143,1860,7547,8852,17942,
#Partially deleted in new
chrX	130171648	130184870	chrX:130171648-130184870	3	+	130172062	130184740	789624	2	672,586,	0,12636,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chrX	130202710	130268899	chrX:130202710-130268899	3	-	130204976	130260449	789624	19	2282,37,119,63,141,311,132,147,101,158,218,107,171,112,137,66,147,47,138,	0,2406,2586,6942,12482,13080,17638,24048,24971,26266,27799,33503,33758,36871,40852,41089,44148,57708,66051,
#Partially deleted in new
chrX	130215192	130268883	chrX:130215192-130268883	0	-	130215192	130260449	789624	14	141,311,132,101,158,218,107,171,112,137,66,147,47,122,	0,598,5156,12489,13784,15317,21021,21276,24389,28370,28607,31666,45226,53569,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	130310071	130310178	chrX:130310071-130310178	3	-	130310071	130310071	8553170	1	107,	0,
#Deleted in new
chrX	130330856	130331069	chrX:130330856-130331069	7	+	130330856	130330856	16724991	1	213,	0,
#Partially deleted in new
chrX	130339887	130373361	chrX:130339887-130373361	1	+	130345211	130372950	789624	10	89,94,148,95,86,96,125,136,81,453,	0,5294,6656,9363,10758,18752,24740,25653,31676,33021,
#Partially deleted in new
chrX	130339887	130373361	chrX:130339887-130373361	3	+	130340278	130372950	789624	11	89,247,94,148,95,86,96,125,136,81,453,	0,219,5294,6656,9363,10758,18752,24740,25653,31676,33021,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	130339887	130373361	chrX:130339887-130373361	1	+	130340278	130372950	789624	12	89,238,94,148,95,86,96,93,125,136,81,453,	0,219,5294,6656,9363,10758,18752,19159,24740,25653,31676,33021,
#Partially deleted in new
chrX	130339899	130364725	chrX:130339899-130364725	0	+	130339899	130339899	8553170	6	77,94,148,95,96,98,	0,5282,6644,9351,18740,24728,
#Partially deleted in new
chrX	130339909	130365563	chrX:130339909-130365563	0	+	130339909	130339909	8553170	8	67,94,148,95,86,96,125,23,	0,5272,6634,9341,10736,18730,24718,25631,
#Partially deleted in new
chrX	130339910	130358987	chrX:130339910-130358987	0	+	130339910	130339910	8553170	5	66,94,148,95,348,	0,5271,6633,9340,18729,
#Partially deleted in new
chrX	130339912	130358736	chrX:130339912-130358736	0	+	130340278	130358736	789624	7	64,247,94,148,95,86,97,	0,194,5269,6631,9338,10733,18727,
#Partially deleted in new
chrX	130340051	130373361	chrX:130340051-130373361	1	+	130340278	130372950	789624	10	302,94,148,95,86,96,125,136,81,453,	0,5130,6492,9199,10594,18588,24576,25489,31512,32857,
#Partially deleted in new
chrX	130340133	130365675	chrX:130340133-130365675	0	+	130340133	130340133	8553170	9	220,94,148,95,44,86,96,125,135,	0,5048,6410,9117,9690,10512,18506,24494,25407,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	130340278	130372950	chrX:130340278-130372950	1	+	130340278	130372950	789624	11	66,94,148,95,86,96,93,125,136,81,42,	0,4903,6265,8972,10367,18361,18768,24349,25262,31285,32630,
#Partially deleted in new
chrX	130340278	130372950	chrX:130340278-130372950	1	+	130340278	130372950	789624	10	66,94,148,95,86,96,125,136,81,42,	0,4903,6265,8972,10367,18361,24349,25262,31285,32630,
#Partially deleted in new
chrX	130345184	130373005	chrX:130345184-130373005	0	+	130345184	130345184	8553170	8	91,95,86,96,125,136,81,97,	0,4066,5461,13455,19443,20356,26379,27724,
#Partially deleted in new
chrX	130345185	130349674	chrX:130345185-130349674	0	+	130345185	130345185	8553170	3	90,148,424,	0,1358,4065,
#Partially deleted in new
chrX	130349247	130365036	chrX:130349247-130365036	0	+	130349247	130349247	8553170	4	98,86,96,409,	0,1398,9392,15380,
#Partially deleted in new
chrX	130365241	130373314	chrX:130365241-130373314	0	+	130365241	130365241	8553170	3	435,81,406,	0,6322,7667,
#Deleted in new
chrX	130384439	130385447	chrX:130384439-130385447	3	-	130384439	130385447	789624	1	1008,	0,
#Partially deleted in new
chrX	130401968	130413343	chrX:130401968-130413343	3	+	130402032	130412848	789624	6	69,116,52,130,178,983,	0,286,1833,7288,9379,10392,
#Partially deleted in new
chrX	130402000	130411524	chrX:130402000-130411524	0	+	130402000	130402000	8553170	4	370,52,130,177,	0,1801,7256,9347,
#Partially deleted in new
chrX	130402004	130404450	chrX:130402004-130404450	1	+	130402032	130403857	789624	3	33,116,649,	0,250,1797,
#Partially deleted in new
chrX	130402252	130412752	chrX:130402252-130412752	1	+	130402252	130412712	789624	8	118,52,130,159,18,330,6,58,	0,1549,7004,9095,9255,10104,10435,10442,
#Partially deleted in new
chrX	130411202	130412395	chrX:130411202-130412395	0	+	130411202	130411202	8553170	2	323,35,	0,1158,
#Partially deleted in new
chrX	130445084	130523536	chrX:130445084-130523536	7	-	130445084	130445084	16724991	20	384,576,764,1649,1642,389,2205,638,1030,1574,775,1722,108,2263,1744,473,76,90,163,86,	0,769,1654,8565,10675,12395,13084,15500,16487,19551,21320,22148,24218,24570,27963,30057,70174,70675,71503,78366,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	130494964	130496588	chrX:130494964-130496588	7	+	130494964	130494964	16724991	1	1624,	0,
#Deleted in new
chrX	130495158	130496232	chrX:130495158-130496232	5	+	130495158	130495158	16724991	1	1074,	0,
#Deleted in new
chrX	130545585	130546474	chrX:130545585-130546474	7	+	130545585	130545585	16724991	2	159,239,	0,650,
#Partially deleted in new
chrX	130623368	130903234	chrX:130623368-130903234	1	-	130625313	130703216	789624	14	2077,86,109,108,182,115,107,213,234,207,156,135,48,186,	0,4589,8099,11615,13860,33212,42274,44161,46596,56173,65494,79751,278315,279680,
#Partially deleted in new
chrX	130623380	130709313	chrX:130623380-130709313	1	-	130625313	130709291	789624	13	2065,86,109,108,182,115,107,213,234,207,156,135,71,	0,4577,8087,11603,13848,33200,42262,44149,46584,56161,65482,79739,85862,
#Partially deleted in new
chrX	130623384	130903317	chrX:130623384-130903317	3	-	130625313	130709291	789624	16	2061,86,109,108,182,115,107,213,234,207,156,135,89,144,48,269,	0,4573,8083,11599,13844,33196,42258,44145,46580,56157,65478,79735,85858,160162,278299,279664,
#Partially deleted in new
chrX	130623384	130903317	chrX:130623384-130903317	1	-	130625313	130703216	789624	15	2061,86,109,108,182,115,107,213,234,207,156,135,144,48,269,	0,4573,8083,11599,13844,33196,42258,44145,46580,56157,65478,79735,160162,278299,279664,
#Partially deleted in new
chrX	130623901	130667701	chrX:130623901-130667701	1	-	130625313	130665703	789624	9	1544,86,109,108,182,115,33,73,172,	0,4056,7566,11082,13327,32679,41741,41775,43628,
#Deleted in new
chrX	130645722	130646325	chrX:130645722-130646325	7	+	130645722	130645722	16724991	1	603,	0,
#Partially deleted in new
chrX	130656580	130903204	chrX:130656580-130903204	0	-	130656580	130703216	789624	10	115,107,213,234,207,156,135,144,48,156,	0,9062,10949,13384,22961,32282,46539,126966,245103,246468,
#Partially deleted in new
chrX	130679645	130903192	chrX:130679645-130903192	0	-	130679645	130679645	8553170	7	103,156,135,89,144,48,144,	0,9217,23474,29597,103901,222038,223403,
#Partially deleted in new
chrX	130981589	131039846	chrX:130981589-131039846	3	-	130981589	130981589	8553170	2	267,134,	0,58123,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	131016468	131058146	chrX:131016468-131058146	1	-	131016468	131016468	789624	3	53,141,100,	0,23244,41578,
#Partially deleted in new
chrX	131058241	131089879	chrX:131058241-131089879	3	+	131081665	131088785	789624	12	203,395,66,236,193,56,151,149,177,98,107,1252,	0,23282,24923,25492,25973,26384,26672,27346,27671,28087,28317,30386,
#Partially deleted in new
chrX	131058356	131089883	chrX:131058356-131089883	1	+	131058386	131088785	789624	12	88,159,66,236,193,56,151,149,177,98,107,1256,	0,23403,24808,25377,25858,26269,26557,27231,27556,27972,28202,30271,
#Partially deleted in new
chrX	131072987	131084675	chrX:131072987-131084675	0	+	131081809	131084675	789624	6	24,159,66,236,193,50,	0,8772,10177,10746,11227,11638,
#Deleted in new
chrX	131078716	131089883	chrX:131078716-131089883	0	+	131078753	131088785	789624	12	38,159,66,236,193,56,151,149,177,98,107,1256,	0,3043,4448,5017,5498,5909,6197,6871,7196,7612,7842,9911,
#Deleted in new
chrX	131078716	131089882	chrX:131078716-131089882	1	+	131083822	131088785	789624	12	38,159,66,236,193,56,151,149,177,98,107,1255,	0,3043,4448,5017,5498,5909,6197,6871,7196,7612,7842,9911,
#Deleted in new
chrX	131083709	131089883	chrX:131083709-131089883	1	+	131083822	131088785	789624	9	260,193,56,151,149,177,98,107,1256,	0,505,916,1204,1878,2203,2619,2849,4918,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	131134085	131134390	chrX:131134085-131134390	3	-	131134085	131134085	8553170	1	305,	0,
#Deleted in new
chrX	131204067	131205010	chrX:131204067-131205010	7	+	131204067	131204067	16724991	1	943,	0,
#Deleted in new
chrX	131221195	131221436	chrX:131221195-131221436	7	-	131221195	131221195	16724991	1	241,	0,
#Partially deleted in new
chrX	131273505	131289278	chrX:131273505-131289278	1	-	131273795	131286674	789624	19	426,124,279,288,288,288,288,279,291,33,71,121,279,294,285,288,282,137,65,	0,577,1093,1493,1972,2455,3433,4350,4955,5637,5765,7712,8160,8938,9474,11673,12261,13099,15708,
#Partially deleted in new
chrX	131273508	131289226	chrX:131273508-131289226	3	-	131273795	131286674	789624	20	423,124,279,288,288,288,288,279,291,33,71,121,279,294,285,288,282,27,137,13,	0,574,1090,1490,1969,2452,3430,4347,4952,5634,5762,7709,8157,8935,9471,11670,12258,12928,13096,15705,
#Partially deleted in new
chrX	131273510	131289429	chrX:131273510-131289429	1	-	131273795	131286674	789624	20	421,124,279,288,288,288,288,279,291,48,71,121,279,294,285,288,282,27,137,216,	0,572,1088,1488,1967,2450,3428,4345,4950,5632,5760,7707,8155,8933,9469,11668,12256,12926,13094,15703,
#Boundary problem: need 27, got 0, diff 27, mapped 0.0
chrX	131273510	131578899	chrX:131273510-131578899	1	-	131273795	131286674	789624	27	421,124,279,288,288,288,288,279,291,33,71,121,279,294,285,288,282,137,62,120,39,178,82,101,132,131,232,	0,572,1088,1488,1967,2450,3428,4345,4950,5632,5760,7707,8155,8933,9469,11668,12256,13094,15703,26140,30574,91238,94857,95441,115506,126063,305157,
#Deleted in new
chrX	131275978	131277517	chrX:131275978-131277517	0	-	131275978	131275978	8553170	2	270,579,	0,960,
#Deleted in new
chrX	131280968	131281346	chrX:131280968-131281346	0	-	131280968	131280968	8553170	2	86,129,	0,249,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	131284165	131289060	chrX:131284165-131289060	1	-	131285116	131286674	789624	5	1301,282,27,137,39,	0,1601,2271,2439,4856,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	131284165	131289286	chrX:131284165-131289286	1	-	131285116	131286674	789624	5	1301,282,27,137,73,	0,1601,2271,2439,5048,
#Deleted in new
chrX	131324390	131325313	chrX:131324390-131325313	7	-	131324390	131324390	16724991	1	923,	0,
#Deleted in new
chrX	131341569	131342425	chrX:131341569-131342425	7	-	131341569	131341569	16724991	1	856,	0,
#Deleted in new
chrX	131398071	131398957	chrX:131398071-131398957	7	-	131398071	131398071	16724991	1	886,	0,
#Deleted in new
chrX	131424300	131425239	chrX:131424300-131425239	7	+	131424300	131424300	16724991	1	939,	0,
#Deleted in new
chrX	131437054	131437670	chrX:131437054-131437670	7	-	131437054	131437054	16724991	1	616,	0,
#Deleted in new
chrX	131492278	131492886	chrX:131492278-131492886	7	-	131492278	131492278	16724991	1	608,	0,
#Deleted in new
chrX	131543975	131545056	chrX:131543975-131545056	3	+	131544073	131545000	789624	1	1081,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	131562728	131563846	chrX:131562728-131563846	7	+	131562728	131562728	16724991	1	1118,	0,
#Partially deleted in new
chrX	131596120	131596987	chrX:131596120-131596987	7	+	131596120	131596120	16724991	2	312,214,	0,653,
#Deleted in new
chrX	131619012	131619951	chrX:131619012-131619951	7	+	131619012	131619012	16724991	1	939,	0,
#Deleted in new
chrX	131646638	131646890	chrX:131646638-131646890	7	+	131646638	131646638	16724991	1	252,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	131688778	131830604	chrX:131688778-131830604	3	-	131688778	131688778	8553170	12	3858,153,149,99,148,122,153,102,122,143,144,313,	0,60527,66819,67832,79770,88844,95108,96378,105215,105545,136443,141513,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrX	131691529	131795809	chrX:131691529-131795809	1	-	131691529	131691529	8553170	13	1107,59,94,153,153,149,67,148,153,102,122,170,1,	0,17968,20121,51566,57776,64068,65113,77019,92357,93627,102464,102767,104279,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	131691557	131818406	chrX:131691557-131818406	0	-	131691557	131691557	8553170	11	1079,94,153,149,99,148,122,153,170,66,112,	0,20093,57748,64040,65053,76991,86065,92329,102739,113414,126737,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrX	131691995	131785262	chrX:131691995-131785262	1	-	131691995	131691995	8553170	13	641,154,70,102,59,94,153,149,99,148,122,153,106,	0,3471,3848,11421,17502,19655,57310,63602,64615,76553,85627,91891,93161,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	131694860	131755709	chrX:131694860-131755709	1	-	131694860	131694860	8553170	3	1053,153,112,	0,54445,60737,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrX	131702651	131830643	chrX:131702651-131830643	1	-	131702651	131702651	789624	13	867,59,70,153,149,99,148,153,143,523,66,144,352,	0,6846,8999,46654,52946,53959,65897,81235,91672,93157,102320,122570,127640,
#Partially deleted in new
chrX	131795049	131830604	chrX:131795049-131830604	0	-	131795049	131795049	8553170	4	1282,66,144,313,	0,9922,30172,35242,
#Deleted in new
chrX	131795656	131796167	chrX:131795656-131796167	7	-	131795656	131795656	16724991	1	511,	0,
#Deleted in new
chrX	131803311	131803741	chrX:131803311-131803741	7	-	131803311	131803311	16724991	1	430,	0,
#Deleted in new
chrX	131937669	131937853	chrX:131937669-131937853	7	+	131937669	131937669	16724991	1	184,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	131938845	131938956	chrX:131938845-131938956	7	-	131938845	131938845	16724991	1	111,	0,
#Partially deleted in new
chrX	132023264	132075943	chrX:132023264-132075943	3	+	132023617	132074159	0	12	143,152,231,57,109,158,186,149,94,63,137,1809,	0,243,31366,40168,44950,45147,46213,47804,49003,49548,49692,50870,
#Partially deleted in new
chrX	132023301	132075943	chrX:132023301-132075943	1	+	132023617	132074159	789624	11	106,152,231,57,109,158,186,149,94,128,1809,	0,206,31329,40131,44913,45110,46176,47767,48966,49664,50833,
#Partially deleted in new
chrX	132023301	132074461	chrX:132023301-132074461	1	+	132023617	132074159	789624	13	106,152,231,66,57,109,158,186,149,94,63,137,327,	0,206,31329,32154,40131,44913,45110,46176,47767,48966,49511,49655,50833,
#Partially deleted in new
chrX	132023304	132075943	chrX:132023304-132075943	1	+	132023617	132074159	0	11	103,152,57,109,158,186,149,94,63,137,1809,	0,203,40128,44910,45107,46173,47764,48963,49508,49652,50830,
#Partially deleted in new
chrX	132023607	132074270	chrX:132023607-132074270	1	+	132023617	132074159	0	10	52,231,57,109,158,149,94,63,137,136,	0,31023,39825,44607,44804,47461,48660,49205,49349,50527,
#Partially deleted in new
chrX	132076992	132094263	chrX:132076992-132094263	1	-	132077871	132094063	789624	8	1974,76,69,164,96,148,115,222,	0,3013,3205,5370,7497,8588,8927,17049,
#Partially deleted in new
chrX	132076994	132128020	chrX:132076994-132128020	3	-	132077871	132127844	789624	12	1972,76,69,164,96,148,115,98,79,43,105,233,	0,3011,3203,5368,7495,8586,8925,17047,20271,22473,23617,50793,
#Partially deleted in new
chrX	132077871	132127844	chrX:132077871-132127844	1	-	132077871	132127844	789624	12	1095,76,69,164,96,148,115,98,34,43,105,57,	0,2134,2326,4491,6618,7709,8048,16170,19394,21596,22740,49916,
#Deleted in new
chrX	132130090	132131352	chrX:132130090-132131352	7	-	132130090	132130090	16724991	1	1262,	0,
#Partially deleted in new
chrX	132203023	132219480	chrX:132203023-132219480	1	-	132214167	132217070	789624	6	2564,313,161,90,102,111,	0,11110,13972,14254,15208,16346,
#Partially deleted in new
chrX	132203024	132218124	chrX:132203024-132218124	3	-	132214167	132217268	789624	4	2563,313,811,209,	0,11109,13971,14891,
#Partially deleted in new
chrX	132204649	132219433	chrX:132204649-132219433	1	-	132214167	132217268	789624	6	938,313,811,97,110,64,	0,9484,12346,13266,13582,14720,
#Partially deleted in new
chrX	132205448	132218332	chrX:132205448-132218332	0	-	132205448	132205448	8553170	5	139,313,161,90,101,	0,8685,11547,11829,12783,
#Partially deleted in new
chrX	132217146	132430162	chrX:132217146-132430162	0	+	132217146	132217146	8553170	3	63,92,350,	0,22473,212666,
#Deleted in new
chrX	132217665	132219443	chrX:132217665-132219443	0	-	132217665	132217665	8553170	2	141,74,	0,1704,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	132218506	132432862	chrX:132218506-132432862	3	+	132218506	132218506	789624	3	331,92,3050,	0,21113,211306,
#Partially deleted in new
chrX	132369316	132413608	chrX:132369316-132413608	1	-	132379665	132406281	789624	8	10361,95,36,151,237,192,165,26,	0,12861,15346,17344,21530,22826,36911,44266,
#Partially deleted in new
chrX	132369316	132413575	chrX:132369316-132413575	1	-	132379665	132413509	789624	7	10361,95,151,237,192,165,93,	0,12861,17344,21530,22826,36911,44166,
#Partially deleted in new
chrX	132372000	132439677	chrX:132372000-132439677	1	-	132379665	132439611	789624	7	7677,95,151,237,192,165,243,	0,10177,14660,18846,20142,34227,67434,
#Partially deleted in new
chrX	132378148	132439690	chrX:132378148-132439690	3	-	132379665	132439611	789624	8	1529,95,36,151,237,192,165,256,	0,4029,6514,8512,12698,13994,28079,61286,
#Partially deleted in new
chrX	132379202	132413575	chrX:132379202-132413575	1	-	132379665	132413509	789624	8	475,95,36,151,237,192,165,93,	0,2975,5460,7458,11644,12940,27025,34280,
#Partially deleted in new
chrX	132379203	132439690	chrX:132379203-132439690	1	-	132381375	132439611	789624	9	474,74,95,36,46,237,192,165,256,	0,2155,2974,5459,7457,11643,12939,27024,60231,
#Partially deleted in new
chrX	132379203	132489968	chrX:132379203-132489968	1	-	132379665	132406281	789624	9	474,95,36,151,237,192,165,138,155,	0,2974,5459,7457,11643,12939,27024,60231,110610,
#Partially deleted in new
chrX	132379307	132390960	chrX:132379307-132390960	0	-	132381375	132390960	789624	6	370,74,95,36,151,114,	0,2051,2870,5355,7353,11539,
#Deleted in new
chrX	132379514	132386802	chrX:132379514-132386802	0	-	132379514	132379514	8553170	3	163,95,142,	0,2663,7146,
#Partially deleted in new
chrX	132382215	132489866	chrX:132382215-132489866	0	-	132382215	132406281	789624	7	57,36,151,237,192,165,53,	0,2447,4445,8631,9927,24012,107598,
#Partially deleted in new
chrX	132384662	132489015	chrX:132384662-132489015	0	-	132384662	132406281	789624	6	36,151,237,192,165,165,	0,1998,6184,7480,21565,104188,
#Partially deleted in new
chrX	132390853	132411382	chrX:132390853-132411382	0	-	132390853	132390853	8553170	4	230,192,165,193,	0,1289,15374,20336,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	132580116	132580223	chrX:132580116-132580223	3	-	132580116	132580116	8553170	1	107,	0,
#Partially deleted in new
chrX	132626015	132961395	chrX:132626015-132961395	3	-	132628222	132958602	789624	4	3078,519,694,150,	0,330792,332159,335230,
#Partially deleted in new
chrX	132627969	132961395	chrX:132627969-132961395	1	-	132628222	132958602	789624	6	1124,87,33,519,694,150,	0,41143,80492,328838,330205,333276,
#Partially deleted in new
chrX	132628222	132958602	chrX:132628222-132958602	1	-	132628222	132958602	789624	5	871,87,33,519,428,	0,40890,80239,328585,329952,
#Partially deleted in new
chrX	132628222	132958602	chrX:132628222-132958602	1	-	132628222	132958602	789624	3	871,519,428,	0,328585,329952,
#Partially deleted in new
chrX	132628851	132957277	chrX:132628851-132957277	1	-	132628851	132957277	789624	6	18,223,87,39,48,416,	0,19,40261,79610,179868,328010,
#Deleted in new
chrX	132667641	132669888	chrX:132667641-132669888	3	+	132667641	132667641	789624	3	87,137,326,	0,632,1921,
#Partially deleted in new
chrX	132735083	132758332	chrX:132735083-132758332	0	-	132735083	132735083	8553170	2	310,77,	0,23172,
#Partially deleted in new
chrX	132907278	132907575	chrX:132907278-132907575	7	-	132907278	132907278	16724991	1	297,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	133024630	133028272	chrX:133024630-133028272	1	-	133025478	133028220	789624	1	3642,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	133025025	133097107	chrX:133025025-133097107	3	-	133025478	133028220	789624	6	3271,65,114,46,91,78,	0,58681,65087,65692,66327,72004,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	133045862	133097109	chrX:133045862-133097109	0	-	133045862	133045862	8553170	6	83,65,114,46,91,80,	0,37844,44250,44855,45490,51167,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	133141299	133143940	chrX:133141299-133143940	7	-	133141299	133141299	16724991	4	515,196,301,163,	0,830,1134,2478,
#Partially deleted in new
chrX	133152753	133152892	chrX:133152753-133152892	3	+	133152753	133152753	8553170	1	139,	0,
#Partially deleted in new
chrX	133216668	133218348	chrX:133216668-133218348	3	-	133217041	133218259	789624	1	1680,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	133238656	133238816	chrX:133238656-133238816	3	-	133238656	133238656	8553170	1	160,	0,
#Partially deleted in new
chrX	133300102	133415490	chrX:133300102-133415490	3	-	133302866	133414965	789624	9	2967,176,137,147,131,166,392,159,685,	0,3063,4622,5669,5921,11155,24042,39080,114703,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	133531722	133531826	chrX:133531722-133531826	3	-	133531722	133531722	8553170	1	104,	0,
#Partially deleted in new
chrX	133535744	133985895	chrX:133535744-133985895	3	-	133536123	133985449	789624	8	549,160,121,126,134,695,162,621,	0,60695,125985,156624,164150,217737,417305,449530,
#Partially deleted in new
chrX	133535753	133985646	chrX:133535753-133985646	1	-	133536123	133985449	789624	9	540,160,121,126,134,69,695,162,372,	0,60686,125976,156615,164141,168451,217728,417296,449521,
#Partially deleted in new
chrX	133536123	133985449	chrX:133536123-133985449	1	-	133536123	133985449	789624	7	170,160,121,126,134,695,175,	0,60316,125606,156245,163771,217358,449151,
#Partially deleted in new
chrX	133596365	133753702	chrX:133596365-133753702	0	-	133596431	133753702	789624	5	234,121,126,134,221,	0,65364,96003,103529,157116,
#Deleted in new
chrX	133670970	133671386	chrX:133670970-133671386	7	+	133670970	133670970	16724991	1	416,	0,
#Deleted in new
chrX	133762795	133763683	chrX:133762795-133763683	7	+	133762795	133762795	16724991	1	888,	0,
#Deleted in new
chrX	133989442	133990086	chrX:133989442-133990086	7	+	133989442	133989442	16724991	1	644,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	134142227	134142340	chrX:134142227-134142340	3	-	134142227	134142227	8553170	1	113,	0,
#Deleted in new
chrX	134166681	134166932	chrX:134166681-134166932	7	+	134166681	134166681	16724991	1	251,	0,
#Deleted in new
chrX	134168910	134174089	chrX:134168910-134174089	3	-	134168910	134168910	8553170	2	1442,2421,	0,2758,
#Deleted in new
chrX	134169377	134169452	chrX:134169377-134169452	3	-	134169377	134169377	5263520	1	75,	0,
#Deleted in new
chrX	134169537	134169612	chrX:134169537-134169612	3	-	134169537	134169537	5263520	1	75,	0,
#Deleted in new
chrX	134169670	134169766	chrX:134169670-134169766	3	-	134169670	134169670	5263520	1	96,	0,
#Deleted in new
chrX	134169808	134169877	chrX:134169808-134169877	3	-	134169808	134169808	5263520	1	69,	0,
#Deleted in new
chrX	134170040	134170111	chrX:134170040-134170111	3	-	134170040	134170040	5263520	1	71,	0,
#Deleted in new
chrX	134170197	134170278	chrX:134170197-134170278	3	-	134170197	134170197	5263520	1	81,	0,
#Partially deleted in new
chrX	134204352	134205916	chrX:134204352-134205916	7	+	134204352	134204352	16724991	2	518,351,	0,1213,
#Partially deleted in new
chrX	134237046	134245778	chrX:134237046-134245778	1	+	134244800	134245778	789624	2	297,1002,	0,7730,
#Partially deleted in new
chrX	134237046	134246207	chrX:134237046-134246207	3	+	134244800	134245778	789624	3	297,62,1431,	0,1732,7730,
#Partially deleted in new
chrX	134272286	134273658	chrX:134272286-134273658	7	+	134272286	134272286	16724991	1	1372,	0,
#Partially deleted in new
chrX	134373252	134428790	chrX:134373252-134428790	3	+	134377617	134425330	0	11	215,184,102,134,44,167,144,105,134,130,3130,	0,4319,4752,20248,20656,40238,40570,41763,43916,51948,52408,
#Partially deleted in new
chrX	134373311	134428789	chrX:134373311-134428789	1	+	134377617	134425330	0	10	156,184,102,134,44,167,144,105,134,3589,	0,4260,4693,20189,20597,40179,40511,41704,43857,51889,
#Partially deleted in new
chrX	134373311	134428791	chrX:134373311-134428791	1	+	134377617	134425330	789624	11	156,184,102,134,44,170,144,105,134,130,3131,	0,4260,4693,20189,20597,40176,40511,41704,43857,51889,52349,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	134373319	134420323	chrX:134373319-134420323	1	+	134377617	134417306	789624	9	148,184,102,134,44,170,144,105,3155,	0,4252,4685,20181,20589,40168,40503,41696,43849,
#Partially deleted in new
chrX	134373372	134415292	chrX:134373372-134415292	1	+	134377617	134415222	0	8	95,184,102,134,44,170,144,277,	0,4199,4632,20128,20536,40115,40450,41643,
#Partially deleted in new
chrX	134460152	134500668	chrX:134460152-134500668	3	+	134460311	134500077	0	9	186,107,184,66,18,83,47,77,639,	0,13206,15028,26312,30035,33355,38237,38455,39877,
#Partially deleted in new
chrX	134460350	134498641	chrX:134460350-134498641	0	+	134460350	134460350	8553170	8	185,107,184,66,18,83,47,34,	0,13008,14830,26114,29837,33157,38039,38257,
#Partially deleted in new
chrX	134473373	134520513	chrX:134473373-134520513	0	+	134473373	134473373	8553170	8	92,184,66,18,83,47,77,32,	0,1807,13091,16814,20134,25016,25234,47108,
#Deleted in new
chrX	134522701	134522990	chrX:134522701-134522990	7	+	134522701	134522701	16724991	1	289,	0,
#Deleted in new
chrX	134540184	134540262	chrX:134540184-134540262	3	-	134540184	134540184	5263520	1	78,	0,
#Deleted in new
chrX	134540340	134540431	chrX:134540340-134540431	3	-	134540340	134540340	5263520	1	91,	0,
#Deleted in new
chrX	134540507	134540607	chrX:134540507-134540607	3	-	134540507	134540507	5263520	1	100,	0,
#Deleted in new
chrX	134541340	134541437	chrX:134541340-134541437	3	-	134541340	134541340	5263520	1	97,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	134543336	134546632	chrX:134543336-134546632	3	-	134543336	134543336	8553170	3	595,84,81,	0,1377,3215,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	134543442	134546630	chrX:134543442-134546630	0	-	134543442	134543442	789624	3	557,84,79,	0,1271,3109,
#Deleted in new
chrX	134543766	134544880	chrX:134543766-134544880	0	-	134543766	134543766	8553170	2	165,167,	0,947,
#Deleted in new
chrX	134544425	134546623	chrX:134544425-134546623	1	-	134544425	134544425	8553170	3	372,201,76,	0,1526,2122,
#Deleted in new
chrX	134544425	134545738	chrX:134544425-134545738	0	-	134544425	134544425	8553170	2	372,274,	0,1039,
#Deleted in new
chrX	134546327	134546398	chrX:134546327-134546398	3	-	134546327	134546327	5263520	1	71,	0,
#Deleted in new
chrX	134546613	134546711	chrX:134546613-134546711	3	-	134546613	134546613	5263520	1	98,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	134549972	134559923	chrX:134549972-134559923	0	+	134549972	134549972	8553170	3	68,118,538,	0,8407,9413,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	134550023	134559909	chrX:134550023-134559909	3	+	134550023	134550023	789624	3	202,118,524,	0,8356,9362,
#Partially deleted in new
chrX	134565837	134658483	chrX:134565837-134658483	3	-	134566043	134566682	789624	3	903,72,156,	0,36213,92490,
#Partially deleted in new
chrX	134565876	134733636	chrX:134565876-134733636	0	-	134565876	134565876	8553170	3	864,72,202,	0,36174,167558,
#Partially deleted in new
chrX	134566509	134764263	chrX:134566509-134764263	0	-	134566509	134566509	8553170	3	231,72,30,	0,35541,197724,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	134599456	134606254	chrX:134599456-134606254	3	+	134599456	134599456	8553170	4	71,95,98,674,	0,1427,5021,6124,
#Partially deleted in new
chrX	134601556	134764322	chrX:134601556-134764322	0	-	134601556	134601556	8553170	3	566,85,89,	0,131878,162677,
#Deleted in new
chrX	134607156	134607632	chrX:134607156-134607632	7	+	134607156	134607156	16724991	1	476,	0,
#Deleted in new
chrX	134650829	134651411	chrX:134650829-134651411	7	+	134650829	134650829	16724991	1	582,	0,
#Partially deleted in new
chrX	134769565	134797134	chrX:134769565-134797134	3	-	134772138	134796205	789624	9	2718,97,62,62,102,55,44,79,1027,	0,12255,16320,17906,19164,19519,19657,24249,26542,
#Partially deleted in new
chrX	134769566	134797232	chrX:134769566-134797232	1	-	134771284	134796205	789624	11	1788,97,62,62,102,55,44,57,79,248,112,	0,12254,16319,17905,19163,19518,19656,20013,24248,26541,27554,
#Partially deleted in new
chrX	134769566	134797155	chrX:134769566-134797155	1	-	134772138	134796205	789624	10	2717,97,65,62,102,55,44,57,79,1048,	0,12254,16319,17905,19163,19518,19656,20013,24248,26541,
#Partially deleted in new
chrX	134771095	134789104	chrX:134771095-134789104	0	-	134771095	134771095	8553170	7	259,141,97,62,62,102,20,	0,1047,10725,14790,16376,17634,17989,
#Partially deleted in new
chrX	134771573	134796274	chrX:134771573-134796274	1	-	134772138	134796205	789624	9	710,97,65,62,102,55,44,79,167,	0,10247,14312,15898,17156,17511,17649,22241,24534,
#Partially deleted in new
chrX	134771896	134789104	chrX:134771896-134789104	0	-	134771896	134771896	8553170	6	387,97,65,62,102,20,	0,9924,13989,15575,16833,17188,
#Partially deleted in new
chrX	134772078	134797187	chrX:134772078-134797187	1	-	134772138	134796205	789624	11	205,97,62,62,102,55,44,57,79,248,67,	0,9742,13807,15393,16651,17006,17144,17501,21736,24029,25042,
#Partially deleted in new
chrX	134772100	134797187	chrX:134772100-134797187	1	-	134772138	134796205	789624	11	183,97,65,62,102,55,44,57,79,248,67,	0,9720,13785,15371,16629,16984,17122,17479,21714,24007,25020,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	134796394	134810975	chrX:134796394-134810975	1	+	134804197	134809373	789624	4	53,146,169,1789,	0,7706,11145,12792,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	134796408	134811150	chrX:134796408-134811150	1	+	134804197	134809373	789624	4	52,146,169,1964,	0,7692,11131,12778,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	134796788	134822975	chrX:134796788-134822975	1	+	134804197	134821377	789624	5	76,146,169,79,1649,	0,7312,10751,17982,24538,
#Partially deleted in new
chrX	134804115	134854388	chrX:134804115-134854388	0	+	134804197	134852803	789624	10	131,169,79,57,44,55,93,89,97,298,	0,3424,10655,25110,41089,41231,43267,43767,48684,49975,
#Partially deleted in new
chrX	134807128	134854591	chrX:134807128-134854591	1	+	134807598	134854217	789624	11	213,169,79,57,44,55,93,89,62,97,501,	0,411,7642,22097,38076,38218,40254,40754,42038,45671,46962,
#Partially deleted in new
chrX	134807168	134854835	chrX:134807168-134854835	1	+	134807598	134854111	789624	6	540,79,57,44,55,745,	0,7602,22057,38036,38178,46922,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	134807190	134822990	chrX:134807190-134822990	1	+	134807598	134821377	789624	4	151,169,79,1664,	0,349,7580,14136,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	134807190	134854517	chrX:134807190-134854517	0	+	134807598	134832986	789624	11	518,79,57,184,122,835,44,55,93,97,427,	0,7580,22035,25754,28484,31536,38014,38156,40192,45609,46900,
#Partially deleted in new
chrX	134807192	134854610	chrX:134807192-134854610	1	+	134807598	134854236	789624	7	516,79,57,44,55,97,520,	0,7578,22033,38012,38154,45607,46898,
#Partially deleted in new
chrX	134807193	134854591	chrX:134807193-134854591	3	+	134807598	134854111	789624	7	515,79,57,44,55,93,501,	0,7577,22032,38011,38153,40189,46897,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	134807216	134809557	chrX:134807216-134809557	1	+	134807598	134809373	789624	3	125,169,371,	0,323,1970,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	134807222	134811183	chrX:134807222-134811183	1	+	134807598	134809373	789624	2	486,1997,	0,1964,
#Deleted in new
chrX	134807238	134808180	chrX:134807238-134808180	1	+	134807598	134808168	789624	3	103,169,76,	0,301,866,
#Partially deleted in new
chrX	134807252	134852891	chrX:134807252-134852891	0	+	134807252	134807252	8553170	6	456,79,57,44,55,92,	0,7518,21973,37952,38094,45547,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	134807258	134854515	chrX:134807258-134854515	0	+	134807598	134831653	789624	11	450,79,57,33,153,122,877,44,55,97,425,	0,7512,21967,24377,26815,28416,31468,37946,38088,45541,46832,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	134807260	134854803	chrX:134807260-134854803	0	+	134807598	134838798	789624	11	448,79,57,877,84,44,55,93,86,62,713,	0,7510,21965,31466,36849,37944,38086,40122,40625,41906,46830,
#Partially deleted in new
chrX	134807280	134854591	chrX:134807280-134854591	1	+	134807598	134854217	789624	8	428,79,57,44,55,93,89,501,	0,7490,21945,37924,38066,40102,40602,46810,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	134835094	134854562	chrX:134835094-134854562	0	+	134835094	134835094	8553170	7	702,877,44,55,93,97,472,	0,3632,10110,10252,12288,17705,18996,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	134839172	134854183	chrX:134839172-134854183	0	+	134839172	134839172	8553170	7	305,44,55,93,62,97,93,	0,6032,6174,8210,9994,13627,14918,
#Partially deleted in new
chrX	134887625	134915267	chrX:134887625-134915267	3	-	134889160	134899433	789624	6	1567,162,218,76,255,86,	0,3853,9191,11464,11654,27556,
#Partially deleted in new
chrX	134888953	134915231	chrX:134888953-134915231	0	-	134888953	134888953	8553170	5	239,162,218,255,50,	0,2525,7863,10326,26228,
#Partially deleted in new
chrX	134889014	134915227	chrX:134889014-134915227	1	-	134889160	134899433	789624	5	178,218,76,255,46,	0,7802,10075,10265,26167,
#Partially deleted in new
chrX	134889016	134899534	chrX:134889016-134899534	0	-	134889016	134889016	8553170	3	176,218,255,	0,7800,10263,
#Partially deleted in new
chrX	134889122	134899534	chrX:134889122-134899534	1	-	134889160	134899433	789624	5	70,162,221,76,255,	0,2356,7691,9967,10157,
#Partially deleted in new
chrX	134899017	134915238	chrX:134899017-134915238	0	-	134899017	134899017	8553170	2	517,57,	0,16164,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	134918309	134918416	chrX:134918309-134918416	3	-	134918309	134918309	8553170	1	107,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	134949548	134953382	chrX:134949548-134953382	3	+	134949548	134949548	789624	3	107,336,518,	0,651,3316,
#Partially deleted in new
chrX	134961710	134962305	chrX:134961710-134962305	7	-	134961710	134961710	16724991	1	595,	0,
#Deleted in new
chrX	134990937	134992473	chrX:134990937-134992473	3	+	134991095	134991347	789624	1	1536,	0,
#Deleted in new
chrX	135020503	135022529	chrX:135020503-135022529	3	-	135022117	135022459	789624	1	2026,	0,
#Deleted in new
chrX	135032365	135033546	chrX:135032365-135033546	3	+	135032383	135032725	789624	1	1181,	0,
#Deleted in new
chrX	135032381	135033546	chrX:135032381-135033546	0	+	135032381	135032381	8553170	2	194,422,	0,743,
#Deleted in new
chrX	135032381	135033400	chrX:135032381-135033400	0	+	135032381	135032381	8553170	2	194,384,	0,635,
#Deleted in new
chrX	135050931	135052175	chrX:135050931-135052175	3	-	135051766	135052108	789624	1	1244,	0,
#Deleted in new
chrX	135050931	135052090	chrX:135050931-135052090	0	-	135050931	135050931	8553170	2	588,174,	0,985,
#Deleted in new
chrX	135050939	135052196	chrX:135050939-135052196	0	-	135050939	135050939	8553170	2	537,280,	0,977,
#Deleted in new
chrX	135051057	135052141	chrX:135051057-135052141	0	-	135051057	135051057	8553170	2	311,225,	0,859,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	135059684	135123604	chrX:135059684-135123604	0	+	135059684	135059684	8553170	3	50,146,364,	0,60842,63556,
#Deleted in new
chrX	135075135	135076597	chrX:135075135-135076597	7	-	135075135	135075135	16724991	1	1462,	0,
#Deleted in new
chrX	135094986	135098634	chrX:135094986-135098634	3	-	135098396	135098633	789624	2	2135,602,	0,3046,
#Partially deleted in new
chrX	135116757	135123952	chrX:135116757-135123952	3	+	135116757	135116757	8553170	3	169,146,712,	0,3769,6483,
#Deleted in new
chrX	135118954	135120526	chrX:135118954-135120526	3	-	135119081	135119261	789624	3	356,238,87,	0,779,1485,
#Deleted in new
chrX	135118954	135119746	chrX:135118954-135119746	1	-	135119081	135119261	789624	2	356,32,	0,760,
#Deleted in new
chrX	135123238	135123604	chrX:135123238-135123604	3	-	135123238	135123238	8553170	2	136,114,	0,252,
#Deleted in new
chrX	135135148	135135770	chrX:135135148-135135770	7	-	135135148	135135148	16724991	1	622,	0,
#Partially deleted in new
chrX	135156535	135171398	chrX:135156535-135171398	1	-	135156958	135171171	789624	6	493,188,113,145,185,321,	0,780,1663,3875,13058,14542,
#Partially deleted in new
chrX	135156539	135171398	chrX:135156539-135171398	3	-	135157311	135171171	789624	5	964,113,145,185,321,	0,1659,3871,13054,14538,
#Partially deleted in new
chrX	135180254	135194679	chrX:135180254-135194679	7	-	135180254	135180254	16724991	6	192,113,145,185,32,63,	0,892,3370,12643,14105,14362,
#Partially deleted in new
chrX	135201730	135215232	chrX:135201730-135215232	7	+	135201730	135201730	16724991	4	145,147,113,192,	0,10245,12502,13310,
#Deleted in new
chrX	135236894	135237408	chrX:135236894-135237408	7	+	135236894	135236894	16724991	1	514,	0,
#Partially deleted in new
chrX	135248919	135344087	chrX:135248919-135344087	0	-	135248919	135248919	789624	4	382,146,323,827,	0,2946,6535,94341,
#Deleted in new
chrX	135252060	135253558	chrX:135252060-135253558	3	+	135253276	135253456	789624	3	38,238,331,	0,506,1167,
#Deleted in new
chrX	135252791	135253583	chrX:135252791-135253583	1	+	135253276	135253456	789624	2	32,356,	0,436,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	135285787	135344087	chrX:135285787-135344087	3	-	135287136	135294140	789624	7	2059,127,92,193,529,272,2320,	0,5221,5684,6493,7942,9980,55980,
#Partially deleted in new
chrX	135285791	135296033	chrX:135285791-135296033	1	-	135287136	135294140	789624	4	2055,127,529,266,	0,5217,7938,9976,
#Partially deleted in new
chrX	135286879	135291603	chrX:135286879-135291603	0	-	135286879	135286879	8553170	2	967,595,	0,4129,
#Partially deleted in new
chrX	135297045	135298585	chrX:135297045-135298585	7	+	135297045	135297045	16724991	2	703,433,	0,1107,
#Deleted in new
chrX	135309479	135309659	chrX:135309479-135309659	3	+	135309479	135309659	789624	1	180,	0,
#Partially deleted in new
chrX	135327757	135330743	chrX:135327757-135330743	3	+	135327757	135327757	8553170	2	78,370,	0,2616,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	135344795	135363152	chrX:135344795-135363152	3	+	135347118	135361076	789624	5	40,454,205,114,2960,	0,2223,4314,15096,15397,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	135344795	135349029	chrX:135344795-135349029	1	+	135347118	135347613	789624	2	40,2011,	0,2223,
#Deleted in new
chrX	135396428	135397764	chrX:135396428-135397764	7	+	135396428	135396428	16724991	2	33,372,	0,964,
#Deleted in new
chrX	135397441	135397621	chrX:135397441-135397621	5	+	135397441	135397441	16724991	1	180,	0,
#Deleted in new
chrX	135421942	135428074	chrX:135421942-135428074	3	+	135422131	135422368	789624	2	788,4442,	0,1690,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	135428167	135428285	chrX:135428167-135428285	7	-	135428167	135428167	16724991	1	118,	0,
#Deleted in new
chrX	135432959	135438634	chrX:135432959-135438634	7	+	135432959	135432959	16724991	1	5675,	0,
#Deleted in new
chrX	135445896	135447368	chrX:135445896-135447368	7	-	135445896	135445896	16724991	3	66,188,113,	0,346,1359,
#Deleted in new
chrX	135464328	135465484	chrX:135464328-135465484	7	-	135464328	135464328	16724991	1	1156,	0,
#Deleted in new
chrX	135520082	135520674	chrX:135520082-135520674	3	-	135520082	135520082	789624	2	290,108,	0,484,
#Partially deleted in new
chrX	135520642	135582493	chrX:135520642-135582493	1	+	135520992	135581636	789624	18	461,78,150,90,184,129,164,153,133,95,111,219,124,143,235,375,94,966,	0,598,24780,25737,26059,26494,28999,31351,35525,48694,49793,52172,53296,54441,56550,59145,60407,60885,
#Partially deleted in new
chrX	135520658	135582509	chrX:135520658-135582509	3	+	135520992	135581636	789624	17	445,78,150,90,184,129,164,153,133,95,219,124,143,235,375,94,982,	0,582,24764,25721,26043,26478,28983,31335,35509,48678,52156,53280,54425,56534,59129,60391,60869,
#Partially deleted in new
chrX	135520658	135582509	chrX:135520658-135582509	0	+	135520658	135520658	789624	16	445,78,150,90,184,129,164,153,95,219,124,143,103,375,94,982,	0,582,24764,25721,26043,26478,28983,31335,48678,52156,53280,54425,56534,59129,60391,60869,
#Partially deleted in new
chrX	135520992	135582509	chrX:135520992-135582509	0	+	135520992	135520992	8553170	16	111,78,150,90,184,129,164,153,133,3697,124,143,103,375,94,982,	0,248,24430,25387,25709,26144,28649,31001,35175,48344,52946,54091,56200,58795,60057,60535,
#Partially deleted in new
chrX	135579884	135582510	chrX:135579884-135582510	0	+	135579884	135579884	8553170	4	278,94,37,270,	0,1165,1643,2356,
#Partially deleted in new
chrX	135579936	135582502	chrX:135579936-135582502	0	+	135579936	135579936	8553170	4	226,94,104,262,	0,1113,1591,2304,
#Partially deleted in new
chrX	135583650	135585160	chrX:135583650-135585160	7	-	135583650	135583650	16724991	2	1307,125,	0,1385,
#Partially deleted in new
chrX	135598926	135615431	chrX:135598926-135615431	7	+	135598926	135598926	16724991	24	87,133,86,135,143,135,141,141,141,140,141,141,141,141,138,141,141,139,141,141,134,369,94,97,	0,5401,7904,8297,8682,9072,9455,9842,10231,10619,11004,11391,11781,12167,12480,12867,13253,13640,14032,14425,14811,15192,15930,16408,
#Partially deleted in new
chrX	135637622	135642756	chrX:135637622-135642756	7	-	135637622	135637622	16724991	12	138,123,141,141,141,138,141,140,141,141,109,141,	0,385,1171,1555,1935,2707,3095,3482,3867,4255,4644,4993,
#Partially deleted in new
chrX	135673590	135686151	chrX:135673590-135686151	7	-	135673590	135673590	16724991	15	97,94,363,134,143,141,141,141,141,141,141,141,88,133,87,	0,481,944,1552,1929,2315,2704,3093,3487,3877,4264,4647,5095,7551,12474,
#Deleted in new
chrX	135710094	135710377	chrX:135710094-135710377	7	-	135710094	135710094	16724991	1	283,	0,
#Partially deleted in new
chrX	135713452	135723226	chrX:135713452-135723226	3	+	135718940	135723033	789624	5	238,175,249,94,251,	0,5482,7575,8205,9523,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	135718929	135723539	chrX:135718929-135723539	1	+	135718940	135723033	789624	4	180,249,94,564,	0,2098,2728,4046,
#Deleted in new
chrX	135730732	135732197	chrX:135730732-135732197	7	-	135730732	135730732	16724991	2	391,406,	0,1059,
#Deleted in new
chrX	135751118	135752583	chrX:135751118-135752583	7	+	135751118	135751118	16724991	2	406,391,	0,1074,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	135759845	135764444	chrX:135759845-135764444	1	-	135760351	135764444	789624	4	564,94,249,169,	0,1788,2262,4430,
#Partially deleted in new
chrX	135760156	135768191	chrX:135760156-135768191	3	-	135760351	135764444	789624	5	253,94,249,175,84,	0,1477,1951,4119,7951,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	135777129	135785298	chrX:135777129-135785298	3	-	135777635	135781729	789624	5	564,94,249,175,79,	0,1788,2263,4431,8090,
#Partially deleted in new
chrX	135777479	135781729	chrX:135777479-135781729	1	-	135777635	135781729	789624	4	214,94,249,169,	0,1438,1913,4081,
#Partially deleted in new
chrX	135794705	135799001	chrX:135794705-135799001	1	-	135794897	135798993	789624	4	250,94,249,177,	0,1474,1949,4119,
#Partially deleted in new
chrX	135794741	135802656	chrX:135794741-135802656	3	-	135794897	135798993	789624	5	214,94,249,175,146,	0,1438,1913,4083,7769,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	135811667	135816265	chrX:135811667-135816265	1	-	135812173	135816265	789624	4	564,94,249,169,	0,1786,2260,4429,
#Partially deleted in new
chrX	135811980	135820012	chrX:135811980-135820012	3	-	135812173	135816265	789624	5	251,94,249,175,239,	0,1473,1947,4116,7793,
#Partially deleted in new
chrX	135829246	135837268	chrX:135829246-135837268	3	-	135829439	135833533	789624	5	251,94,249,175,227,	0,1475,1950,4118,7795,
#Partially deleted in new
chrX	135829439	135833541	chrX:135829439-135833541	1	-	135829439	135833533	789624	4	58,94,249,177,	0,1282,1757,3925,
#Partially deleted in new
chrX	135846498	135854538	chrX:135846498-135854538	3	-	135846691	135850783	789624	5	251,94,249,175,239,	0,1473,1947,4116,7801,
#Partially deleted in new
chrX	135846499	135850791	chrX:135846499-135850791	1	-	135846691	135850783	789624	4	250,94,249,177,	0,1472,1946,4115,
#Partially deleted in new
chrX	135863775	135871812	chrX:135863775-135871812	3	-	135863970	135868061	789624	5	253,94,249,175,239,	0,1475,1949,4117,7798,
#Partially deleted in new
chrX	135863778	135868069	chrX:135863778-135868069	1	-	135863970	135868061	789624	4	250,94,249,177,	0,1472,1946,4114,
#Partially deleted in new
chrX	135881062	135889086	chrX:135881062-135889086	3	-	135881257	135885344	789624	5	253,94,249,175,239,	0,1473,1945,4113,7785,
#Partially deleted in new
chrX	135881257	135885352	chrX:135881257-135885352	1	-	135881257	135885344	789624	4	58,94,249,177,	0,1278,1750,3918,
#Partially deleted in new
chrX	135889204	135913060	chrX:135889204-135913060	1	+	135896242	135912897	789624	20	63,98,133,93,141,141,141,141,141,141,141,141,141,141,141,141,141,375,94,263,	0,7027,12354,15272,16047,16819,17206,17721,18108,18496,18884,19272,19659,20434,20825,21210,21987,22374,23116,23593,
#Partially deleted in new
chrX	135889204	135913060	chrX:135889204-135913060	3	+	135896242	135912897	789624	12	63,98,133,93,141,141,141,141,141,375,94,263,	0,7027,12354,15272,16047,20434,20825,21210,21987,22374,23116,23593,
#Partially deleted in new
chrX	135896242	135913061	chrX:135896242-135913061	1	+	135896242	135912897	789624	19	87,133,93,141,141,141,141,141,141,141,141,141,141,141,141,141,375,94,264,	0,5316,8234,9009,9781,10168,10683,11070,11458,11846,12234,12621,13396,13787,14172,14949,15336,16078,16555,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	135942477	135947139	chrX:135942477-135947139	7	-	135942477	135942477	16724991	4	626,94,239,175,	0,1845,2318,4487,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	135962069	135974063	chrX:135962069-135974063	3	-	135965023	135973675	789624	4	3114,104,53,467,	0,5320,8988,11527,
#Partially deleted in new
chrX	135973840	136047267	chrX:135973840-136047267	1	+	135985658	136044724	789624	18	192,147,204,200,78,77,113,106,142,106,89,114,112,154,31,80,106,2816,	0,796,11783,20945,24267,24641,25015,28267,36601,39108,39508,42804,48745,50489,56291,59573,66235,70611,
#Partially deleted in new
chrX	135974635	136047267	chrX:135974635-136047267	3	+	135985658	136044724	789624	17	148,225,200,78,77,113,106,142,106,89,114,112,154,31,80,106,2816,	0,10967,20150,23472,23846,24220,27472,35806,38313,38713,42009,47950,49694,55496,58778,65440,69816,
#Partially deleted in new
chrX	135974636	136047247	chrX:135974636-136047247	1	+	135985658	136044724	789624	17	446,204,104,78,77,113,106,142,106,89,114,112,154,31,80,106,2796,	0,10987,20149,23471,23845,24219,27471,35805,38312,38712,42008,47949,49693,55495,58777,65439,69815,
#Partially deleted in new
chrX	135974763	136047267	chrX:135974763-136047267	1	+	135985658	136044724	789624	19	20,55,67,225,200,78,77,113,106,142,106,89,114,112,154,31,80,106,2816,	0,478,8959,10839,20022,23344,23718,24092,27344,35678,38185,38585,41881,47822,49566,55368,58650,65312,69688,
#Partially deleted in new
chrX	135983466	136047267	chrX:135983466-136047267	1	+	135985658	136044724	789624	17	323,225,200,78,77,113,106,142,106,89,114,112,154,31,80,106,2816,	0,2136,11319,14641,15015,15389,18641,26975,29482,29882,33178,39119,40863,46665,49947,56609,60985,
#Partially deleted in new
chrX	135985134	136047130	chrX:135985134-136047130	1	+	135985658	136044724	789624	17	343,225,200,78,77,113,106,142,106,89,114,112,154,31,80,106,2679,	0,468,9651,12973,13347,13721,16973,25307,27814,28214,31510,37451,39195,44997,48279,54941,59317,
#Partially deleted in new
chrX	135985426	136047267	chrX:135985426-136047267	1	+	135985502	136044724	789624	16	401,200,78,77,113,106,142,106,89,114,112,154,31,80,106,2816,	0,9359,12681,13055,13429,16681,25015,27522,27922,31218,37159,38903,44705,47987,54649,59025,
#Partially deleted in new
chrX	135985426	136047269	chrX:135985426-136047269	1	+	135985502	136044724	789624	16	401,104,78,77,113,106,142,106,89,114,112,154,31,80,106,2818,	0,9359,12681,13055,13429,16681,25015,27522,27922,31218,37159,38903,44705,47987,54649,59025,
#Partially deleted in new
chrX	135985432	135998883	chrX:135985432-135998883	0	+	135985658	135998883	789624	6	40,225,200,78,77,28,	0,170,9353,12675,13049,13423,
#Partially deleted in new
chrX	135985434	136047247	chrX:135985434-136047247	1	+	135985658	136044724	789624	18	43,225,200,78,77,113,106,142,106,89,114,112,154,90,31,80,106,2796,	0,168,9351,12673,13047,13421,16673,25007,27514,27914,31210,37151,38895,43451,44697,47979,54641,59017,
#Partially deleted in new
chrX	135985434	136047261	chrX:135985434-136047261	1	+	136024460	136044724	789624	16	393,200,78,77,113,106,142,106,89,114,112,154,31,80,106,2810,	0,9351,12673,13047,13421,16673,25007,27514,27914,31210,37151,38895,44697,47979,54641,59017,
#Partially deleted in new
chrX	135985715	136030460	chrX:135985715-136030460	0	+	135985715	135985715	8553170	14	112,200,78,77,113,106,142,106,89,114,112,154,90,329,	0,9070,12392,12766,13140,16392,24726,27233,27633,30929,36870,38614,43170,44416,
#Partially deleted in new
chrX	136010119	136047247	chrX:136010119-136047247	0	+	136010119	136010119	8553170	11	178,142,106,89,114,112,154,31,80,106,2796,	0,322,2829,3229,6525,12466,14210,20012,23294,29956,34332,
#Partially deleted in new
chrX	136024455	136040084	chrX:136024455-136040084	0	+	136024455	136040084	789624	3	28,31,41,	0,5676,15588,
#Partially deleted in new
chrX	136029442	136047241	chrX:136029442-136047241	0	+	136029442	136029442	8553170	5	451,31,80,106,2790,	0,689,3971,10633,15009,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	136033033	136044470	chrX:136033033-136044470	0	+	136033033	136033033	8553170	3	460,106,19,	0,7042,11418,
#Deleted in new
chrX	136077843	136078631	chrX:136077843-136078631	7	+	136077843	136077843	16724991	1	788,	0,
#Partially deleted in new
chrX	136097834	136098348	chrX:136097834-136098348	7	-	136097834	136097834	16724991	1	514,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	136134316	136134420	chrX:136134316-136134420	3	-	136134316	136134316	8553170	1	104,	0,
#Partially deleted in new
chrX	136146701	136210272	chrX:136146701-136210272	1	+	136206432	136210025	0	7	311,74,182,175,170,187,402,	0,23205,59705,60314,61090,61753,63169,
#Partially deleted in new
chrX	136147399	136211359	chrX:136147399-136211359	1	+	136206432	136209954	0	8	229,74,182,175,170,187,200,1489,	0,22507,59007,59616,60392,61055,61843,62471,
#Partially deleted in new
chrX	136147464	136211359	chrX:136147464-136211359	3	+	136206432	136210025	0	7	164,74,182,175,170,187,1489,	0,22442,58942,59551,60327,60990,62406,
#Partially deleted in new
chrX	136147532	136207918	chrX:136147532-136207918	0	+	136206432	136207918	789624	4	96,182,175,127,	0,58874,59483,60259,
#Partially deleted in new
chrX	136147535	136211354	chrX:136147535-136211354	1	+	136206432	136209954	0	6	93,74,182,175,170,1484,	0,22371,58871,59480,60256,62335,
#Partially deleted in new
chrX	136147665	136208566	chrX:136147665-136208566	0	+	136206432	136208566	789624	6	213,74,182,175,170,112,	0,22241,58741,59350,60126,60789,
#Partially deleted in new
chrX	136148082	136207925	chrX:136148082-136207925	0	+	136206432	136207925	789624	5	64,74,182,175,134,	0,21824,58324,58933,59709,
#Partially deleted in new
chrX	136148228	136207903	chrX:136148228-136207903	0	+	136206432	136207903	789624	5	35,74,182,175,112,	0,21678,58178,58787,59563,
#Partially deleted in new
chrX	136148439	136207875	chrX:136148439-136207875	0	+	136206432	136207875	789624	5	51,74,182,175,84,	0,21467,57967,58576,59352,
#Partially deleted in new
chrX	136148577	136210257	chrX:136148577-136210257	1	+	136206432	136210025	0	7	160,74,182,175,170,187,387,	0,21329,57829,58438,59214,59877,61293,
#Partially deleted in new
chrX	136167003	136208575	chrX:136167003-136208575	0	+	136206432	136208575	789624	6	74,74,182,175,170,121,	0,2903,39403,40012,40788,41451,
#Partially deleted in new
chrX	136167003	136207093	chrX:136167003-136207093	0	+	136206432	136207093	789624	5	74,159,74,182,78,	0,1126,2903,39403,40012,
#Partially deleted in new
chrX	136167008	136206488	chrX:136167008-136206488	0	+	136206432	136206488	789624	4	69,191,74,82,	0,836,2898,39398,
#Partially deleted in new
chrX	136167014	136211323	chrX:136167014-136211323	1	+	136206432	136210025	0	7	84,74,182,175,170,187,1453,	0,2892,39392,40001,40777,41440,42856,
#Partially deleted in new
chrX	136167050	136207057	chrX:136167050-136207057	0	+	136206432	136207057	789624	5	27,132,74,182,42,	0,853,2856,39356,39965,
#Partially deleted in new
chrX	136168193	136208575	chrX:136168193-136208575	0	+	136206432	136208575	789624	6	74,74,182,175,170,121,	0,1713,38213,38822,39598,40261,
#Partially deleted in new
chrX	136169295	136211349	chrX:136169295-136211349	1	+	136206432	136210025	0	6	685,182,175,170,187,1479,	0,37111,37720,38496,39159,40575,
#Partially deleted in new
chrX	136169636	136211359	chrX:136169636-136211359	1	+	136206432	136210025	0	7	97,74,182,175,170,187,1489,	0,270,36770,37379,38155,38818,40234,
#Partially deleted in new
chrX	136169675	136208570	chrX:136169675-136208570	0	+	136206432	136208570	789624	6	58,74,182,175,170,116,	0,231,36731,37340,38116,38779,
#Partially deleted in new
chrX	136169838	136208478	chrX:136169838-136208478	0	+	136206432	136208478	789624	5	27,182,175,170,24,	0,36568,37177,37953,38616,
#Partially deleted in new
chrX	136169890	136207883	chrX:136169890-136207883	0	+	136206432	136207883	789624	4	90,182,175,92,	0,36516,37125,37901,
#Partially deleted in new
chrX	136169925	136211359	chrX:136169925-136211359	1	+	136206432	136209954	0	7	55,182,175,170,187,200,1489,	0,36481,37090,37866,38529,39317,39945,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	136182713	136207851	chrX:136182713-136207851	0	+	136206432	136207851	789624	4	152,182,175,60,	0,23693,24302,25078,
#Partially deleted in new
chrX	136196756	136211359	chrX:136196756-136211359	1	+	136196802	136210025	0	6	107,182,175,170,187,1489,	0,9650,10259,11035,11698,13114,
#Partially deleted in new
chrX	136196772	136211359	chrX:136196772-136211359	1	+	136197112	136210025	0	6	362,182,175,170,187,1489,	0,9634,10243,11019,11682,13098,
#Partially deleted in new
chrX	136197025	136210067	chrX:136197025-136210067	1	+	136197112	136209954	789624	5	109,182,175,170,197,	0,9381,9990,10766,12845,
#Partially deleted in new
chrX	136197052	136208482	chrX:136197052-136208482	0	+	136197052	136197052	8553170	5	82,124,175,170,28,	0,9412,9963,10739,11402,
#Partially deleted in new
chrX	136197062	136207551	chrX:136197062-136207551	0	+	136197062	136197062	8553170	3	72,182,536,	0,9344,9953,
#Partially deleted in new
chrX	136204720	136209954	chrX:136204720-136209954	0	+	136206432	136209954	789624	6	219,182,175,170,187,84,	0,1686,2295,3071,3734,5150,
#Deleted in new
chrX	136204908	136207661	chrX:136204908-136207661	0	+	136204908	136204908	8553170	3	31,182,646,	0,1498,2107,
#Partially deleted in new
chrX	136206101	136211354	chrX:136206101-136211354	1	+	136206432	136210025	0	6	106,182,175,170,187,1484,	0,305,914,1690,2353,3769,
#Partially deleted in new
chrX	136207395	136209335	chrX:136207395-136209335	0	+	136207395	136207395	8553170	4	35,170,187,93,	0,396,1059,1847,
#Deleted in new
chrX	136209167	136210351	chrX:136209167-136210351	0	+	136209167	136209167	8553170	2	275,481,	0,703,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chrX	136213219	136251371	chrX:136213219-136251371	1	-	136219429	136251358	789624	18	1794,98,79,199,94,54,105,148,136,209,128,677,96,118,164,84,99,83,	0,6178,6373,7545,9173,11607,12689,14064,15403,17165,17619,18324,23024,27940,31412,32845,33023,38069,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chrX	136216810	136251579	chrX:136216810-136251579	1	-	136219429	136251358	789624	19	1683,98,79,199,94,54,105,148,136,209,128,677,96,105,118,164,84,99,291,	0,2587,2782,3954,5582,8016,9098,10473,11812,13574,14028,14733,19433,23571,24349,27821,29254,29432,34478,
#Partially deleted in new
chrX	136216813	136220813	chrX:136216813-136220813	0	-	136216813	136216813	8553170	4	445,98,79,49,	0,2584,2779,3951,
#Boundary problem: need 19, got 0, diff 19, mapped 0.0
chrX	136216819	136256482	chrX:136216819-136256482	3	-	136219429	136256319	789624	19	1674,98,79,199,94,54,105,148,136,209,128,677,96,105,118,164,84,99,179,	0,2578,2773,3945,5573,8007,9089,10464,11803,13565,14019,14724,19424,23562,24340,27812,29245,29423,39484,
#Partially deleted in new
chrX	136219626	136251382	chrX:136219626-136251382	0	-	136219626	136251358	789624	17	45,199,94,54,105,148,136,209,128,554,96,105,118,164,84,99,94,	0,1138,2766,5200,6282,7657,8996,10758,11212,11917,16617,20755,21533,25005,26438,26616,31662,
#Partially deleted in new
chrX	136221778	136227433	chrX:136221778-136227433	0	-	136221778	136221778	8553170	5	99,94,54,105,150,	0,614,3048,4130,5505,
#Partially deleted in new
chrX	136222392	136228995	chrX:136222392-136228995	0	-	136222392	136222392	8553170	5	94,54,105,148,373,	0,2434,3516,4891,6230,
#Deleted in new
chrX	136230384	136231155	chrX:136230384-136231155	0	-	136230384	136230384	8553170	2	209,317,	0,454,
#Partially deleted in new
chrX	136295689	136300298	chrX:136295689-136300298	7	-	136295689	136295689	16724991	2	1232,59,	0,4550,
#Partially deleted in new
chrX	136304852	136416888	chrX:136304852-136416888	1	+	136308777	136416491	789624	24	171,79,615,6042,95,65,40,53,164,133,119,217,163,135,123,46,104,122,269,79,281,102,168,435,	0,3916,17925,39539,46594,48484,51273,52851,54439,56602,58624,66475,68049,82887,87379,88682,90537,93028,94995,98391,100839,107412,109307,111601,
#Partially deleted in new
chrX	136306020	136416684	chrX:136306020-136416684	1	+	136308777	136416491	789624	23	141,79,6042,95,65,40,53,164,133,119,217,163,135,123,46,104,122,269,79,281,102,168,231,	0,2748,38371,45426,47316,50105,51683,53271,55434,57456,65307,66881,81719,86211,87514,89369,91860,93827,97223,99671,106244,108139,110433,
#Partially deleted in new
chrX	136487886	136493780	chrX:136487886-136493780	3	+	136488114	136492375	789624	3	662,352,1819,	0,2246,4075,
#Partially deleted in new
chrX	136497078	136512342	chrX:136497078-136512342	3	+	136497684	136512013	0	10	361,247,181,48,155,164,100,90,138,1535,	0,545,2519,3079,3585,5699,7285,12012,13003,13729,
#Partially deleted in new
chrX	136497220	136502941	chrX:136497220-136502941	0	+	136497684	136502941	789624	6	219,247,181,48,155,164,	0,403,2377,2937,3443,5557,
#Partially deleted in new
chrX	136497233	136502877	chrX:136497233-136502877	0	+	136497684	136502877	789624	6	206,195,181,48,155,100,	0,442,2364,2924,3430,5544,
#Partially deleted in new
chrX	136497510	136512346	chrX:136497510-136512346	1	+	136497684	136512013	0	9	360,181,48,155,164,100,90,138,1539,	0,2087,2647,3153,5267,6853,11580,12571,13297,
#Partially deleted in new
chrX	136532151	136556807	chrX:136532151-136556807	3	+	136536020	136556539	789624	5	145,239,420,54,357,	0,3844,16437,18616,24299,
#Partially deleted in new
chrX	136536127	136556496	chrX:136536127-136556496	0	+	136536127	136556496	789624	4	107,279,54,46,	0,12461,14640,20323,
#Partially deleted in new
chrX	136536194	136556807	chrX:136536194-136556807	0	+	136536194	136556539	789624	3	40,54,357,	0,14573,20256,
#Partially deleted in new
chrX	136550441	136556807	chrX:136550441-136556807	0	+	136550441	136550441	8553170	2	380,357,	0,6009,
#Deleted in new
chrX	136550877	136550960	chrX:136550877-136550960	3	+	136550877	136550877	5263520	1	83,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	136583239	136583345	chrX:136583239-136583345	3	+	136583239	136583239	8553170	1	106,	0,
#Partially deleted in new
chrX	136639542	136642426	chrX:136639542-136642426	3	+	136639542	136639542	789624	3	262,100,324,	0,1231,2560,
#Partially deleted in new
chrX	136639666	136642426	chrX:136639666-136642426	1	+	136639666	136639666	8553170	3	138,67,324,	0,1107,2436,
#Partially deleted in new
chrX	136639739	136642429	chrX:136639739-136642429	0	+	136639739	136639739	8553170	2	65,1656,	0,1034,
#Partially deleted in new
chrX	136648192	136660390	chrX:136648192-136660390	3	+	136648248	136659415	0	5	212,132,58,63,1352,	0,2073,6180,8163,10846,
#Partially deleted in new
chrX	136648226	136660390	chrX:136648226-136660390	1	+	136648248	136659415	789624	4	178,132,58,1352,	0,2039,6146,10812,
#Boundary problem: need 22, got 0, diff 22, mapped 0.0
chrX	136665546	136782088	chrX:136665546-136782088	3	-	136668028	136780882	0	22	2623,55,100,90,94,21,126,146,79,87,147,60,139,123,96,95,71,202,125,85,84,1371,	0,3935,6473,9460,11077,12389,13988,15184,16343,17211,20130,22385,25063,41361,43128,47729,66555,78038,79676,81961,113867,115171,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chrX	136665546	136767343	chrX:136665546-136767343	1	-	136668028	136743783	0	21	2623,55,100,90,94,21,126,146,79,87,147,60,139,123,96,95,71,202,125,85,200,	0,3935,6473,9460,11077,12389,13988,15184,16343,17211,20130,22385,25063,41361,43128,47729,66555,78038,79676,81961,101597,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chrX	136665546	136768627	chrX:136665546-136768627	1	-	136668028	136743783	0	21	2623,55,100,90,94,21,126,146,79,87,147,60,139,123,96,95,71,202,125,85,215,	0,3935,6473,9460,11077,12389,13988,15184,16343,17211,20130,22385,25063,41361,43128,47729,66555,78038,79676,81961,102866,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	136773998	136774105	chrX:136773998-136774105	3	+	136773998	136773998	8553170	1	107,	0,
#Deleted in new
chrX	136788285	136788787	chrX:136788285-136788787	7	+	136788285	136788285	16724991	1	502,	0,
#Deleted in new
chrX	136791063	136791780	chrX:136791063-136791780	7	+	136791063	136791063	16724991	1	717,	0,
#Partially deleted in new
chrX	136807222	136807877	chrX:136807222-136807877	7	-	136807222	136807222	16724991	1	655,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	136816476	136816574	chrX:136816476-136816574	3	-	136816476	136816476	8553170	1	98,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	136840930	136847797	chrX:136840930-136847797	3	-	136840930	136840930	8553170	2	1920,1098,	0,5769,
#Deleted in new
chrX	136847383	136848034	chrX:136847383-136848034	7	+	136847383	136847383	16724991	1	651,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	136848003	136873425	chrX:136848003-136873425	0	-	136848003	136848003	8553170	3	579,78,180,	0,24264,25242,
#Partially deleted in new
chrX	136869186	136880725	chrX:136869186-136880725	3	-	136872294	136879427	0	8	1231,78,83,126,115,107,135,129,	0,3081,5899,6071,6284,9830,10132,11410,
#Partially deleted in new
chrX	136869191	136873982	chrX:136869191-136873982	0	-	136869191	136869191	8553170	3	1226,78,737,	0,3076,4054,
#Partially deleted in new
chrX	136869193	136880722	chrX:136869193-136880722	0	-	136876634	136879427	789624	8	1224,2901,126,115,153,107,135,126,	0,3074,6064,6277,7309,9823,10125,11403,
#Partially deleted in new
chrX	136872274	136879431	chrX:136872274-136879431	0	-	136872337	136879431	789624	8	71,83,126,115,153,172,107,113,	0,2811,2983,3196,4228,5640,6742,7044,
#Partially deleted in new
chrX	136873448	136880725	chrX:136873448-136880725	0	-	136876634	136879427	789624	8	1004,83,126,115,153,107,135,129,	0,1637,1809,2022,3054,5568,5870,7148,
#Partially deleted in new
chrX	136873460	136880725	chrX:136873460-136880725	1	-	136874141	136879427	0	9	992,83,126,115,153,172,107,135,129,	0,1625,1797,2010,3042,4454,5556,5858,7136,
#Partially deleted in new
chrX	136873957	136880725	chrX:136873957-136880725	1	-	136875059	136879427	789624	8	1211,126,115,153,172,107,135,129,	0,1300,1513,2545,3957,5059,5361,6639,
#Partially deleted in new
chrX	136873977	136880764	chrX:136873977-136880764	1	-	136874141	136877918	789624	7	475,83,126,115,153,172,168,	0,1108,1280,1493,2525,3937,6619,
#Partially deleted in new
chrX	136876599	136880725	chrX:136876599-136880725	0	-	136876599	136876599	8553170	5	56,50,107,135,129,	0,1315,2417,2719,3997,
#Partially deleted in new
chrX	136877915	136880725	chrX:136877915-136880725	0	-	136879153	136879427	789624	4	171,142,135,129,	0,1101,1403,2681,
#Deleted in new
chrX	136879016	136880722	chrX:136879016-136880722	0	-	136879016	136879016	8553170	2	437,126,	0,1580,
#Deleted in new
chrX	136879198	136879271	chrX:136879198-136879271	3	-	136879198	136879198	789624	1	73,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	136909394	136993655	chrX:136909394-136993655	7	+	136909394	136909394	16724991	4	386,1533,133,170,	0,11849,15852,84091,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	136909474	137021618	chrX:136909474-137021618	4	+	136909474	136909474	16724991	3	306,133,207,	0,15772,111937,
#Deleted in new
chrX	136947747	136948133	chrX:136947747-136948133	7	-	136947747	136947747	16724991	1	386,	0,
#Partially deleted in new
chrX	136958882	137021479	chrX:136958882-137021479	5	+	136958882	136958882	16724991	10	56,103,129,120,55,160,149,112,169,68,	0,2226,3037,4181,4514,34603,35964,38406,43442,62529,
#Partially deleted in new
chrX	136976416	136985705	chrX:136976416-136985705	7	-	136976416	136976416	16724991	3	60,194,2424,	0,379,6865,
#Partially deleted in new
chrX	136993486	137021630	chrX:136993486-137021630	5	+	136993486	136993486	16724991	4	159,149,55,219,	0,1360,25800,27925,
#Partially deleted in new
chrX	136993553	137021618	chrX:136993553-137021618	4	+	136993553	136993553	16724991	5	92,149,112,169,207,	0,1293,3735,8771,27858,
#Deleted in new
chrX	137030147	137031674	chrX:137030147-137031674	3	-	137030147	137031674	789624	1	1527,	0,
#Deleted in new
chrX	137324971	137325049	chrX:137324971-137325049	7	-	137324971	137324971	16724991	1	78,	0,
#Partially deleted in new
chrX	137441257	137441836	chrX:137441257-137441836	7	-	137441257	137441257	16724991	1	579,	0,
#Partially deleted in new
chrX	137556190	137563925	chrX:137556190-137563925	3	-	137556190	137556190	8553170	3	114,154,36,	0,4853,7699,
#Deleted in new
chrX	137560668	137564387	chrX:137560668-137564387	1	-	137560668	137560668	8553170	2	529,57,	0,3662,
#Deleted in new
chrX	137566141	137571585	chrX:137566141-137571585	3	+	137566691	137570070	0	3	1610,164,1695,	0,2760,3749,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	137566517	137577691	chrX:137566517-137577691	1	+	137566691	137577271	0	3	1234,164,570,	0,2384,10604,
#Deleted in new
chrX	137568804	137569995	chrX:137568804-137569995	0	+	137568804	137568804	8553170	2	261,105,	0,1086,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	137573968	137981763	chrX:137573968-137981763	2	+	137573968	137573968	8553170	4	151,134,76,1474,	0,173462,341563,406321,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	137595264	137595547	chrX:137595264-137595547	3	+	137595264	137595264	8553170	1	283,	0,
#Partially deleted in new
chrX	137660518	137662242	chrX:137660518-137662242	7	+	137660518	137660518	16724991	1	1724,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	137687890	137687994	chrX:137687890-137687994	3	-	137687890	137687890	8553170	1	104,	0,
#Deleted in new
chrX	138397350	138397628	chrX:138397350-138397628	3	+	138397350	138397350	8553170	1	278,	0,
#Deleted in new
chrX	138482744	138483695	chrX:138482744-138483695	7	+	138482744	138482744	16724991	1	951,	0,
#Deleted in new
chrX	138487664	138488871	chrX:138487664-138488871	7	-	138487664	138487664	16724991	1	1207,	0,
#Deleted in new
chrX	138558995	138559298	chrX:138558995-138559298	3	+	138558995	138558995	8553170	1	303,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	138614730	138711665	chrX:138614730-138711665	3	-	138632849	138711003	0	5	18256,199,104,111,849,	0,20726,88253,94087,96086,
#Deleted in new
chrX	138627076	138627343	chrX:138627076-138627343	3	+	138627076	138627076	8553170	2	70,72,	0,195,
#Partially deleted in new
chrX	138631573	138739353	chrX:138631573-138739353	1	-	138632849	138739269	0	5	1413,199,104,111,112,	0,3883,71410,77244,107668,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	138632270	139204275	chrX:138632270-139204275	1	-	138632849	138857641	0	7	716,199,104,111,168,110,217,	0,3186,70713,76547,225241,358237,571788,
#Partially deleted in new
chrX	138632677	139205023	chrX:138632677-139205023	1	-	138632849	139204107	0	6	309,199,104,111,213,103,	0,2779,70306,76140,571381,572243,
#Partially deleted in new
chrX	138632702	139205006	chrX:138632702-139205006	1	-	138632849	139204107	0	7	284,199,104,111,168,213,86,	0,2754,70281,76115,224809,571356,572218,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	138635485	138990567	chrX:138635485-138990567	0	-	138635485	138985084	789624	6	170,104,111,168,74,60,	0,67498,73332,222026,349532,355022,
#Deleted in new
chrX	138667710	138667793	chrX:138667710-138667793	3	-	138667710	138667710	5263520	1	83,	0,
#Partially deleted in new
chrX	138708851	139222777	chrX:138708851-139222777	0	-	138708851	139204107	789624	4	77,168,213,194,	0,148660,495207,513732,
#Partially deleted in new
chrX	138711451	138716092	chrX:138711451-138716092	3	+	138711451	138711451	8553170	4	167,129,86,202,	0,2685,3272,4439,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	138712106	138716617	chrX:138712106-138716617	1	+	138712106	138712106	789624	3	36,86,727,	0,2617,3784,
#Deleted in new
chrX	138806373	138807091	chrX:138806373-138807091	7	+	138806373	138806373	16724991	1	718,	0,
#Partially deleted in new
chrX	138857511	139203525	chrX:138857511-139203525	0	-	138857511	138857641	789624	3	168,74,110,	0,7065,345904,
#Deleted in new
chrX	139362039	139362382	chrX:139362039-139362382	7	+	139362039	139362039	16724991	1	343,	0,
#Deleted in new
chrX	139446890	139447676	chrX:139446890-139447676	7	+	139446890	139446890	16724991	1	786,	0,
#Partially deleted in new
chrX	139530757	139563458	chrX:139530757-139563458	3	+	139530764	139562071	0	8	95,164,25,114,129,203,115,1935,	0,6252,6604,10318,17605,20304,29983,30766,
#Partially deleted in new
chrX	139530757	139548392	chrX:139530757-139548392	0	+	139530757	139530757	8553170	4	95,146,103,30,	0,6252,10329,17605,
#Partially deleted in new
chrX	139530764	139562071	chrX:139530764-139562071	1	+	139530764	139562071	0	7	88,164,25,129,203,115,548,	0,6245,6597,17598,20297,29976,30759,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	139544680	139563301	chrX:139544680-139563301	0	+	139544680	139544680	8553170	7	468,590,129,203,115,218,196,	0,2624,3682,6381,16060,16843,18425,
#Partially deleted in new
chrX	139581769	139692156	chrX:139581769-139692156	1	-	139582470	139691999	789624	28	734,113,110,73,79,93,222,126,93,93,70,116,67,89,38,172,192,192,120,115,134,150,117,120,91,115,69,242,	0,3296,4608,5946,6590,8065,14779,15690,16636,20636,22911,23099,23943,25921,28531,33111,34512,35743,37817,44423,44853,47925,49625,50565,63798,65019,69950,110145,
#Partially deleted in new
chrX	139581770	139642728	chrX:139581770-139642728	1	-	139582470	139642518	789624	25	733,113,110,73,79,93,222,126,93,93,70,116,67,89,38,172,192,192,120,115,134,150,117,120,261,	0,3295,4607,5945,6589,8064,14778,15689,16635,20635,22910,23098,23942,25920,28530,33110,34511,35742,37816,44422,44852,47924,49624,50564,60697,
#Partially deleted in new
chrX	139581770	139708216	chrX:139581770-139708216	3	-	139582470	139651744	789624	28	733,113,110,73,79,93,222,126,93,93,70,116,67,89,38,172,192,192,120,115,134,150,117,120,91,115,69,111,	0,3295,4607,5945,6589,8064,14778,15689,16635,20635,22910,23098,23942,25920,28530,33110,34511,35742,37816,44422,44852,47924,49624,50564,63797,65018,69949,126335,
#Partially deleted in new
chrX	139581770	139605779	chrX:139581770-139605779	0	-	139582470	139605779	789624	13	733,113,110,73,79,93,222,126,93,93,70,116,67,	0,3295,4607,5945,6589,8064,14778,15689,16635,20635,22910,23098,23942,
#Partially deleted in new
chrX	139581770	139642841	chrX:139581770-139642841	1	-	139582442	139642518	789624	22	733,73,79,93,222,126,93,93,70,116,67,89,38,172,192,192,120,115,134,150,120,374,	0,5945,6589,8064,14778,15689,16635,20635,22910,23098,23942,25920,28530,33110,34511,35742,37816,44422,44852,47924,50564,60697,
#Partially deleted in new
chrX	139582141	139615052	chrX:139582141-139615052	0	-	139582470	139615052	789624	16	362,113,110,73,79,93,222,126,93,93,70,116,67,89,38,172,	0,2924,4236,5574,6218,7693,14407,15318,16264,20264,22539,22727,23571,25549,28159,32739,
#Partially deleted in new
chrX	139582296	139708227	chrX:139582296-139708227	1	-	139582470	139651744	789624	29	207,113,110,73,79,93,222,126,93,93,70,116,67,89,38,48,172,192,192,120,115,134,150,117,120,91,115,69,122,	0,2769,4081,5419,6063,7538,14252,15163,16109,20109,22384,22572,23416,25394,28004,30919,32584,33985,35216,37290,43896,44326,47398,49098,50038,63271,64492,69423,125809,
#Partially deleted in new
chrX	139582442	139642518	chrX:139582442-139642518	1	-	139582442	139642518	789624	23	61,73,79,93,222,126,93,93,70,116,67,89,38,172,192,192,120,115,134,150,117,120,51,	0,5273,5917,7392,14106,15017,15963,19963,22238,22426,23270,25248,27858,32438,33839,35070,37144,43750,44180,47252,48952,49892,60025,
#Partially deleted in new
chrX	139582470	139642518	chrX:139582470-139642518	1	-	139582470	139642518	789624	26	33,113,110,73,79,93,222,126,93,93,70,116,67,89,38,48,172,192,192,120,115,134,150,117,120,51,	0,2595,3907,5245,5889,7364,14078,14989,15935,19935,22210,22398,23242,25220,27830,30745,32410,33811,35042,37116,43722,44152,47224,48924,49864,59997,
#Partially deleted in new
chrX	139607183	139614950	chrX:139607183-139614950	0	-	139607183	139607183	8553170	4	596,38,48,70,	0,3117,6032,7697,
#Partially deleted in new
chrX	139726345	139933070	chrX:139726345-139933070	1	-	139728899	139932042	789624	29	2617,154,104,66,136,128,60,137,103,175,264,182,104,74,72,152,162,198,151,82,65,51,104,129,108,81,90,120,1055,	0,11570,14645,17213,19376,23679,31462,35615,36970,41914,48344,56201,56818,58880,60827,61846,62981,69927,70830,71927,72333,73714,75890,78125,88532,90517,92992,100358,205670,
#Partially deleted in new
chrX	139726348	139832288	chrX:139726348-139832288	3	-	139731653	139832189	789624	30	2614,105,154,104,66,136,128,60,146,103,175,264,182,104,74,72,152,162,198,151,82,65,51,104,129,108,81,90,120,135,	0,5302,11567,14642,17210,19373,23676,31459,35612,36967,41911,48341,56198,56815,58877,60824,61843,62978,69924,70827,71924,72330,73711,75887,78122,88529,90514,92989,100355,105805,
#Partially deleted in new
chrX	139726348	139832288	chrX:139726348-139832288	1	-	139728899	139832189	789624	29	2614,154,104,66,136,128,60,146,103,175,264,182,104,74,72,152,162,198,151,82,65,51,104,129,108,81,90,120,135,	0,11567,14642,17210,19373,23676,31459,35612,36967,41911,48341,56198,56815,58877,60824,61843,62978,69924,70827,71924,72330,73711,75887,78122,88529,90514,92989,100355,105805,
#Partially deleted in new
chrX	139726348	139745791	chrX:139726348-139745791	0	-	139731653	139745791	789624	6	2614,105,154,104,66,70,	0,5302,11567,14642,17210,19373,
#Partially deleted in new
chrX	139726352	139750053	chrX:139726352-139750053	0	-	139737766	139750053	789624	7	2610,66,154,104,66,136,29,	0,11378,11563,14638,17206,19369,23672,
#Partially deleted in new
chrX	139728785	139797281	chrX:139728785-139797281	0	-	139728785	139728785	8553170	21	177,105,91,154,104,66,136,128,60,137,103,175,264,182,104,74,72,152,162,198,106,	0,2865,3649,9130,12205,14773,16936,21239,29022,33175,34530,39474,45904,53761,54378,56440,58387,59406,60541,67487,68390,
#Partially deleted in new
chrX	139750090	139782633	chrX:139750090-139782633	0	-	139750090	139750090	8553170	7	62,60,146,103,175,264,87,	0,7717,11870,13225,18169,24599,32456,
#Partially deleted in new
chrX	139782556	139789430	chrX:139782556-139789430	0	-	139782556	139789430	789624	5	172,104,74,152,104,	0,607,2669,5635,6770,
#Partially deleted in new
chrX	139802301	139945276	chrX:139802301-139945276	0	-	139802301	139802301	8553170	7	38,129,108,81,90,120,77,	0,2169,12576,14561,17036,24402,142898,
#Deleted in new
chrX	139885480	139885603	chrX:139885480-139885603	3	+	139885480	139885480	8553170	1	123,	0,
#Deleted in new
chrX	139909903	139910034	chrX:139909903-139910034	3	+	139909903	139909903	8553170	1	131,	0,
#Deleted in new
chrX	139924147	139924231	chrX:139924147-139924231	3	-	139924147	139924147	5263520	1	84,	0,
#Partially deleted in new
chrX	139955724	139965520	chrX:139955724-139965520	3	-	139955895	139965496	789624	3	1015,154,112,	0,2339,9684,
#Partially deleted in new
chrX	140017267	140018037	chrX:140017267-140018037	3	+	140017267	140017267	789624	2	190,392,	0,378,
#Partially deleted in new
chrX	140032343	140033480	chrX:140032343-140033480	7	+	140032343	140032343	16724991	1	1137,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	140085854	140086150	chrX:140085854-140086150	3	+	140085854	140085854	8553170	1	296,	0,
#Partially deleted in new
chrX	140091742	140092561	chrX:140091742-140092561	7	+	140091742	140091742	16724991	1	819,	0,
#Deleted in new
chrX	140216034	140216804	chrX:140216034-140216804	3	-	140216034	140216034	8553170	2	392,190,	0,580,
#Partially deleted in new
chrX	140397061	140398311	chrX:140397061-140398311	7	+	140397061	140397061	16724991	2	832,394,	0,856,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	140451147	140451208	chrX:140451147-140451208	3	+	140451147	140451147	8553170	1	61,	0,
#Deleted in new
chrX	140470865	140471274	chrX:140470865-140471274	7	-	140470865	140470865	16724991	1	409,	0,
#Deleted in new
chrX	140502984	140505116	chrX:140502984-140505116	3	-	140503719	140505060	789624	1	2132,	0,
#Partially deleted in new
chrX	140681105	140687705	chrX:140681105-140687705	3	-	140681105	140681105	8553170	3	198,87,38,	0,6336,6562,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	140709561	140714851	chrX:140709561-140714851	0	+	140709561	140709561	8553170	2	244,3231,	0,2059,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	140709750	140793215	chrX:140709750-140793215	1	+	140709750	140709750	8553170	5	55,36,87,2230,18813,	0,1870,24127,62327,64652,
#Partially deleted in new
chrX	140709758	140791350	chrX:140709758-140791350	0	+	140709758	140709758	8553170	5	47,36,87,174,349,	0,1862,24119,62319,81243,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	140709758	140775904	chrX:140709758-140775904	0	+	140709758	140709758	789624	4	47,36,87,3827,	0,1862,24119,62319,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	140709766	140714848	chrX:140709766-140714848	0	+	140709766	140709766	789624	3	39,36,1354,	0,1854,3728,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	140709766	140773178	chrX:140709766-140773178	0	+	140709766	140709766	8553170	3	39,36,1101,	0,1854,62311,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	140709766	140734954	chrX:140709766-140734954	0	+	140709766	140709766	8553170	3	39,36,1077,	0,1854,24111,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	140709766	140773186	chrX:140709766-140773186	0	+	140709766	140709766	8553170	5	39,36,61,87,1109,	0,1854,3662,24111,62311,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	140709766	140773950	chrX:140709766-140773950	1	+	140709766	140709766	8553170	5	39,36,2773,87,1873,	0,1854,3750,24111,62311,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	140709766	140786887	chrX:140709766-140786887	0	+	140709766	140709766	8553170	5	39,36,87,281,3713,	0,1854,24111,62311,73408,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	140709766	140714218	chrX:140709766-140714218	0	+	140709766	140709766	8553170	4	39,36,83,702,	0,1854,2225,3750,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	140709775	140773173	chrX:140709775-140773173	2	+	140709775	140709775	8553170	5	30,36,87,67,1096,	0,1845,24102,58564,62302,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	140709776	140787343	chrX:140709776-140787343	1	+	140709776	140709776	8553170	5	29,36,87,174,4169,	0,1844,24101,62301,73398,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	140714591	140736144	chrX:140714591-140736144	0	+	140714591	140714591	8553170	3	1698,87,533,	0,19286,21020,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	140715555	140772795	chrX:140715555-140772795	1	+	140715555	140715555	8553170	4	734,87,67,718,	0,18322,52784,56522,
#Partially deleted in new
chrX	140715698	140775643	chrX:140715698-140775643	1	+	140715698	140715698	8553170	4	591,87,281,287,	0,18179,56379,59658,
#Partially deleted in new
chrX	140715860	140771293	chrX:140715860-140771293	0	+	140715860	140715860	8553170	3	429,87,370,	0,18017,55063,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	140733422	140773173	chrX:140733422-140773173	0	+	140733422	140733422	8553170	2	542,1096,	0,38655,
#Partially deleted in new
chrX	140733877	140784965	chrX:140733877-140784965	0	+	140733877	140733877	8553170	2	87,1791,	0,49297,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	140764497	140773203	chrX:140764497-140773203	0	+	140764497	140764497	8553170	2	201,1126,	0,7580,
#Partially deleted in new
chrX	140764561	140772680	chrX:140764561-140772680	1	+	140764561	140764561	8553170	3	137,62,603,	0,3783,7516,
#Partially deleted in new
chrX	140764596	140791356	chrX:140764596-140791356	0	+	140764596	140764596	8553170	3	102,281,355,	0,7481,26405,
#Deleted in new
chrX	140783291	140784659	chrX:140783291-140784659	0	+	140783291	140783291	8553170	2	981,203,	0,1165,
#Deleted in new
chrX	140783577	140784366	chrX:140783577-140784366	3	-	140783577	140784366	789624	1	789,	0,
#Partially deleted in new
chrX	140926171	140926219	chrX:140926171-140926219	3	-	140926171	140926171	5263520	1	48,	0,
#Partially deleted in new
chrX	141002590	141003706	chrX:141002590-141003706	3	+	141002693	141003652	789624	2	193,276,	0,840,
#Partially deleted in new
chrX	141138477	141139174	chrX:141138477-141139174	7	+	141138477	141138477	16724991	2	84,286,	0,411,
#Deleted in new
chrX	141173234	141173588	chrX:141173234-141173588	3	-	141173234	141173234	8553170	1	354,	0,
#Deleted in new
chrX	141175744	141177125	chrX:141175744-141177125	3	-	141176580	141177021	789624	1	1381,	0,
#Deleted in new
chrX	141175748	141177016	chrX:141175748-141177016	0	-	141175748	141175748	8553170	2	660,124,	0,1144,
#Partially deleted in new
chrX	141241462	141242496	chrX:141241462-141242496	3	-	141241516	141242457	789624	2	276,111,	0,923,
#Partially deleted in new
chrX	141261118	141264213	chrX:141261118-141264213	7	-	141261118	141261118	16724991	2	87,859,	0,2236,
#Partially deleted in new
chrX	141380822	141381107	chrX:141380822-141381107	7	+	141380822	141380822	16724991	1	285,	0,
#Partially deleted in new
chrX	141583673	141585011	chrX:141583673-141585011	3	-	141583737	141584678	789624	2	286,405,	0,933,
#Partially deleted in new
chrX	141589434	141590772	chrX:141589434-141590772	3	+	141589767	141590708	789624	2	405,286,	0,1052,
#Deleted in new
chrX	141625863	141626733	chrX:141625863-141626733	3	+	141625863	141625863	8553170	2	378,303,	0,567,
#Partially deleted in new
chrX	141697410	141698739	chrX:141697410-141698739	3	-	141697464	141698405	789624	2	276,406,	0,923,
#Partially deleted in new
chrX	141838315	141897832	chrX:141838315-141897832	3	+	141838315	141897832	789624	8	123,135,257,394,139,75,605,204,	0,27155,40859,43087,56953,57169,58566,59313,
#Partially deleted in new
chrX	141880561	141897832	chrX:141880561-141897832	1	+	141896892	141897693	789624	3	42,107,951,	0,15869,16320,
#Partially deleted in new
chrX	141894665	141897139	chrX:141894665-141897139	0	+	141894665	141894665	8553170	5	149,139,94,77,555,	0,603,1517,1765,1919,
#Partially deleted in new
chrX	141894665	141897832	chrX:141894665-141897832	1	+	141896652	141897693	789624	5	149,139,94,77,1248,	0,603,1517,1765,1919,
#Partially deleted in new
chrX	141896234	141897832	chrX:141896234-141897832	1	+	141896652	141897693	789624	2	42,1248,	0,350,
#Partially deleted in new
chrX	141903893	141909388	chrX:141903893-141909388	3	+	141905072	141908833	789624	4	85,98,107,3980,	0,823,1076,1515,
#Partially deleted in new
chrX	141904801	141908914	chrX:141904801-141908914	1	+	141908203	141908833	789624	4	13,107,139,825,	0,168,607,3288,
#Partially deleted in new
chrX	142147861	142148866	chrX:142147861-142148866	7	-	142147861	142147861	16724991	1	1005,	0,
#Partially deleted in new
chrX	142172865	142173989	chrX:142172865-142173989	7	-	142172865	142172865	16724991	1	1124,	0,
#Partially deleted in new
chrX	142194351	142195490	chrX:142194351-142195490	7	-	142194351	142194351	16724991	1	1139,	0,
#Partially deleted in new
chrX	142202344	142205290	chrX:142202344-142205290	3	-	142202865	142203987	789624	3	1709,94,188,	0,2017,2758,
#Partially deleted in new
chrX	142372275	142373990	chrX:142372275-142373990	7	+	142372275	142372275	16724991	2	953,244,	0,1471,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	142411052	142411171	chrX:142411052-142411171	7	+	142411052	142411052	16724991	1	119,	0,
#Partially deleted in new
chrX	143025917	143034280	chrX:143025917-143034280	3	+	143026014	143034246	789624	2	175,256,	0,8107,
#Partially deleted in new
chrX	143025931	143034702	chrX:143025931-143034702	1	+	143026014	143034696	789624	3	161,205,194,	0,8096,8577,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	143090346	143090677	chrX:143090346-143090677	3	+	143090346	143090346	8553170	1	331,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	143197247	143197591	chrX:143197247-143197591	3	-	143197247	143197247	8553170	1	344,	0,
#Deleted in new
chrX	143343975	143344585	chrX:143343975-143344585	7	+	143343975	143343975	16724991	1	610,	0,
#Deleted in new
chrX	143433041	143433958	chrX:143433041-143433958	7	+	143433041	143433041	16724991	1	917,	0,
#Deleted in new
chrX	143434516	143435280	chrX:143434516-143435280	7	+	143434516	143434516	16724991	1	764,	0,
#Partially deleted in new
chrX	143508734	143517475	chrX:143508734-143517475	3	-	143508814	143517391	789624	2	428,162,	0,8579,
#Deleted in new
chrX	143622789	143634503	chrX:143622789-143634503	3	-	143628594	143631108	789624	2	8369,176,	0,11538,
#Deleted in new
chrX	143628127	143635204	chrX:143628127-143635204	1	-	143628594	143631108	789624	2	3031,326,	0,6751,
#Deleted in new
chrX	143628127	143635777	chrX:143628127-143635777	1	-	143628594	143631108	789624	2	3031,43,	0,7607,
#Deleted in new
chrX	143677152	143678362	chrX:143677152-143678362	7	-	143677152	143677152	16724991	1	1210,	0,
#Partially deleted in new
chrX	143711954	143721423	chrX:143711954-143721423	3	-	143712034	143720668	789624	2	545,833,	0,8636,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	143757736	143828133	chrX:143757736-143828133	3	+	143757736	143757736	8553170	3	105,96,117,	0,68339,70280,
#Deleted in new
chrX	143806390	143806733	chrX:143806390-143806733	7	+	143806390	143806390	16724991	1	343,	0,
#Partially deleted in new
chrX	143884070	143885255	chrX:143884070-143885255	3	+	143884100	143884562	789624	1	1185,	0,
#Deleted in new
chrX	144308833	144309080	chrX:144308833-144309080	7	-	144308833	144308833	16724991	1	247,	0,
#Deleted in new
chrX	144309131	144309693	chrX:144309131-144309693	7	+	144309131	144309131	16724991	1	562,	0,
#Deleted in new
chrX	144840776	144841660	chrX:144840776-144841660	7	+	144840776	144840776	16724991	1	884,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	145057107	145057437	chrX:145057107-145057437	3	+	145057107	145057107	8553170	1	330,	0,
#Deleted in new
chrX	145176581	145176894	chrX:145176581-145176894	7	+	145176581	145176581	16724991	1	313,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	145232928	145233619	chrX:145232928-145233619	3	-	145232928	145232928	8553170	2	82,296,	0,395,
#Partially deleted in new
chrX	145246827	145256112	chrX:145246827-145256112	3	+	145247586	145255814	789624	2	834,442,	0,8843,
#Partially deleted in new
chrX	145630217	145632375	chrX:145630217-145632375	7	+	145630217	145630217	16724991	2	1750,105,	0,2053,
#Deleted in new
chrX	145768094	145768342	chrX:145768094-145768342	7	+	145768094	145768094	16724991	1	248,	0,
#Deleted in new
chrX	145797374	145798439	chrX:145797374-145798439	3	+	145797374	145797374	8553170	1	1065,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	145817831	145829856	chrX:145817831-145829856	3	+	145822425	145824963	789624	5	195,63,537,149,7474,	0,2642,3516,4173,4551,
#Deleted in new
chrX	145818170	145825842	chrX:145818170-145825842	1	+	145822425	145824963	789624	1	7672,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	145827409	145829850	chrX:145827409-145829850	1	+	145827677	145828013	789624	1	2441,	0,
#Deleted in new
chrX	145992749	145992826	chrX:145992749-145992826	3	-	145992749	145992749	5263520	1	77,	0,
#Deleted in new
chrX	145994274	145994351	chrX:145994274-145994351	3	-	145994274	145994274	5263520	1	77,	0,
#Deleted in new
chrX	145994783	145994860	chrX:145994783-145994860	3	-	145994783	145994783	5263520	1	77,	0,
#Deleted in new
chrX	145996668	145996743	chrX:145996668-145996743	3	-	145996668	145996668	5263520	1	75,	0,
#Deleted in new
chrX	145997197	145997274	chrX:145997197-145997274	3	-	145997197	145997197	5263520	1	77,	0,
#Deleted in new
chrX	146001052	146001131	chrX:146001052-146001131	3	-	146001052	146001052	5263520	1	79,	0,
#Deleted in new
chrX	146027793	146027872	chrX:146027793-146027872	3	-	146027793	146027793	5263520	1	79,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	146427455	146427572	chrX:146427455-146427572	7	-	146427455	146427455	16724991	1	117,	0,
#Deleted in new
chrX	146537534	146538048	chrX:146537534-146538048	7	+	146537534	146537534	16724991	1	514,	0,
#Partially deleted in new
chrX	146553727	146555765	chrX:146553727-146555765	7	+	146553727	146553727	16724991	2	775,601,	0,1437,
#Partially deleted in new
chrX	146619596	146620584	chrX:146619596-146620584	7	-	146619596	146619596	16724991	1	988,	0,
#Deleted in new
chrX	146809783	146810409	chrX:146809783-146810409	3	+	146809791	146810308	789624	2	140,296,	0,330,
#Deleted in new
chrX	146814105	146814726	chrX:146814105-146814726	3	-	146814206	146814723	789624	2	296,135,	0,486,
#Deleted in new
chrX	146955074	146955209	chrX:146955074-146955209	7	+	146955074	146955074	16724991	1	135,	0,
#Deleted in new
chrX	146964175	146964485	chrX:146964175-146964485	7	-	146964175	146964175	16724991	1	310,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	147181063	147271894	chrX:147181063-147271894	3	+	147181063	147181063	8553170	5	178,75,158,101,994,	0,37156,47337,87945,89837,
#Deleted in new
chrX	147189703	147189787	chrX:147189703-147189787	3	-	147189703	147189703	5263520	1	84,	0,
#Deleted in new
chrX	147199043	147199127	chrX:147199043-147199127	3	-	147199043	147199043	5263520	1	84,	0,
#Partially deleted in new
chrX	147213462	147213591	chrX:147213462-147213591	3	-	147213462	147213462	5263520	1	129,	0,
#Partially deleted in new
chrX	147225825	147225952	chrX:147225825-147225952	3	-	147225825	147225825	5263520	1	127,	0,
#Partially deleted in new
chrX	147230719	147230843	chrX:147230719-147230843	3	-	147230719	147230719	5263520	1	124,	0,
#Partially deleted in new
chrX	147230983	147231077	chrX:147230983-147231077	3	-	147230983	147230983	5263520	1	94,	0,
#Partially deleted in new
chrX	147236912	147237027	chrX:147236912-147237027	3	-	147236912	147236912	5263520	1	115,	0,
#Partially deleted in new
chrX	147250150	147250230	chrX:147250150-147250230	3	-	147250150	147250150	5263520	1	80,	0,
#Partially deleted in new
chrX	147258759	147258850	chrX:147258759-147258850	3	-	147258759	147258759	5263520	1	91,	0,
#Partially deleted in new
chrX	147259651	147259726	chrX:147259651-147259726	3	-	147259651	147259651	5263520	1	75,	0,
#Partially deleted in new
chrX	147260531	147260625	chrX:147260531-147260625	3	-	147260531	147260531	5263520	1	94,	0,
#Partially deleted in new
chrX	147272334	147272408	chrX:147272334-147272408	3	-	147272334	147272334	5263520	1	74,	0,
#Partially deleted in new
chrX	147279246	147279344	chrX:147279246-147279344	3	-	147279246	147279246	5263520	1	98,	0,
#Partially deleted in new
chrX	147281942	147282030	chrX:147281942-147282030	3	-	147281942	147281942	5263520	1	88,	0,
#Partially deleted in new
chrX	147284640	147284728	chrX:147284640-147284728	3	-	147284640	147284640	5263520	1	88,	0,
#Partially deleted in new
chrX	147476323	147476446	chrX:147476323-147476446	7	+	147476323	147476323	16724991	1	123,	0,
#Deleted in new
chrX	147591611	147591909	chrX:147591611-147591909	7	-	147591611	147591611	16724991	1	298,	0,
#Partially deleted in new
chrX	147801004	147801302	chrX:147801004-147801302	7	+	147801004	147801004	16724991	1	298,	0,
#Partially deleted in new
chrX	147812732	147812974	chrX:147812732-147812974	7	-	147812732	147812732	16724991	1	242,	0,
#Partially deleted in new
chrX	147827278	147827384	chrX:147827278-147827384	3	+	147827278	147827278	8553170	1	106,	0,
#Partially deleted in new
chrX	147900177	147901459	chrX:147900177-147901459	3	-	147900177	147900177	8553170	2	122,412,	0,870,
#Deleted in new
chrX	147909430	147911817	chrX:147909430-147911817	1	-	147909430	147909430	789624	2	1565,440,	0,1947,
#Deleted in new
chrX	147909430	147911817	chrX:147909430-147911817	3	-	147909430	147909430	789624	3	1565,104,176,	0,1850,2211,
#Deleted in new
chrX	147909430	147911817	chrX:147909430-147911817	0	-	147909430	147909430	789624	2	1565,176,	0,2211,
#Deleted in new
chrX	147909430	147911817	chrX:147909430-147911817	0	-	147909430	147909430	789624	1	2387,	0,
#Deleted in new
chrX	147911821	147911948	chrX:147911821-147911948	3	+	147911821	147911821	8553170	1	127,	0,
#Partially deleted in new
chrX	147911950	147951112	chrX:147911950-147951112	1	+	147912179	147948844	0	16	280,53,94,72,149,94,117,171,79,110,135,87,196,183,83,2430,	0,9982,13589,16371,16708,17997,18177,20474,20734,24553,25515,28625,31180,32918,33583,36732,
#Partially deleted in new
chrX	147911950	147951112	chrX:147911950-147951112	1	+	147912179	147948830	0	16	280,53,94,72,149,94,117,171,79,110,135,63,87,108,83,2430,	0,9982,13589,16371,16708,17997,18177,20474,20734,24553,25515,26148,28625,32993,33583,36732,
#Partially deleted in new
chrX	147911950	147951125	chrX:147911950-147951125	1	+	147912179	147948844	0	16	280,53,94,72,149,94,117,171,79,110,135,87,196,108,83,2443,	0,9982,13589,16371,16708,17997,18177,20474,20734,24553,25515,28625,31180,32993,33583,36732,
#Partially deleted in new
chrX	147911950	147948830	chrX:147911950-147948830	1	+	147912179	147948830	789624	15	280,53,94,72,149,94,117,171,79,110,87,196,183,83,96,	0,9982,13589,16371,16708,17997,18177,20474,20734,24553,28625,31180,32918,33583,36784,
#Partially deleted in new
chrX	147911955	147937523	chrX:147911955-147937523	0	+	147912179	147925045	789624	12	275,53,137,94,72,149,94,117,171,79,110,58,	0,9977,12963,13584,16366,16703,17992,18172,20469,20729,24548,25510,
#Partially deleted in new
chrX	147911962	147950315	chrX:147911962-147950315	1	+	147912179	147948844	789624	16	268,53,94,72,149,94,117,171,79,110,135,87,196,147,83,1582,	0,9970,13577,16359,16696,17985,18165,20462,20722,24541,25503,28613,31168,32942,33571,36771,
#Partially deleted in new
chrX	147911963	147933687	chrX:147911963-147933687	1	+	147912179	147933414	789624	11	58,178,53,94,72,149,94,117,171,79,287,	0,89,9969,13576,16358,16695,17984,18164,20461,20721,21437,
#Partially deleted in new
chrX	147912051	147933687	chrX:147912051-147933687	1	+	147912179	147933414	789624	10	179,53,94,72,149,94,117,171,79,287,	0,9881,13488,16270,16607,17896,18076,20373,20633,21349,
#Partially deleted in new
chrX	147912051	147951125	chrX:147912051-147951125	3	+	147912179	147948844	0	17	179,53,94,72,149,94,117,171,79,110,135,63,87,196,183,83,2443,	0,9881,13488,16270,16607,17896,18076,20373,20633,24452,25414,26047,28524,31079,32817,33482,36631,
#Partially deleted in new
chrX	147912051	147950636	chrX:147912051-147950636	1	+	147912179	147948844	789624	16	179,53,94,72,149,94,117,171,79,104,135,87,196,183,83,1903,	0,9881,13488,16270,16607,17896,18076,20373,20633,24458,25414,28524,31079,32817,33482,36682,
#Partially deleted in new
chrX	147912117	147948953	chrX:147912117-147948953	1	+	147912179	147945561	789624	15	113,53,94,72,149,94,117,171,79,110,135,87,26,77,271,	0,9815,13422,16204,16541,17830,18010,20307,20567,24386,25348,28458,31013,33422,36565,
#Deleted in new
chrX	147912122	147914451	chrX:147912122-147914451	1	+	147912179	147912772	789624	2	108,1724,	0,605,
#Partially deleted in new
chrX	147912161	147932713	chrX:147912161-147932713	0	+	147912179	147932713	789624	8	69,53,94,149,94,117,171,29,	0,9771,13378,16497,17786,17966,20263,20523,
#Partially deleted in new
chrX	147912179	147948845	chrX:147912179-147948845	1	+	147912179	147948844	0	17	51,53,94,72,149,94,117,171,79,110,135,63,87,196,108,83,112,	0,9753,13360,16142,16479,17768,17948,20245,20505,24324,25286,25919,28396,30951,32764,33354,36554,
#Partially deleted in new
chrX	147927669	147951119	chrX:147927669-147951119	0	+	147927669	147927669	8553170	12	1138,94,117,171,79,110,135,87,196,183,83,2437,	0,2278,2458,4755,5015,8834,9796,12906,15461,17199,17864,21013,
#Partially deleted in new
chrX	147927735	147936582	chrX:147927735-147936582	0	+	147927735	147927735	8553170	8	658,149,94,117,92,171,79,79,	0,923,2212,2392,3137,4689,4949,8768,
#Partially deleted in new
chrX	147930201	147937493	chrX:147930201-147937493	0	+	147930201	147933414	789624	6	43,171,79,140,110,28,	0,2223,2483,3199,6302,7264,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	147940156	147943188	chrX:147940156-147943188	0	+	147940156	147940156	8553170	2	506,58,	0,2974,
#Deleted in new
chrX	147940580	147943863	chrX:147940580-147943863	0	+	147940580	147940580	8553170	2	82,733,	0,2550,
#Partially deleted in new
chrX	147943244	147948534	chrX:147943244-147948534	0	+	147943244	147948424	789624	4	82,183,83,122,	0,1624,2289,5168,
#Deleted in new
chrX	147944692	147945715	chrX:147944692-147945715	0	+	147944692	147944692	8553170	2	359,182,	0,841,
#Partially deleted in new
chrX	147981328	148026667	chrX:147981328-148026667	3	+	147981402	148025000	789624	6	351,120,141,94,149,166,	0,21872,25373,27289,43536,45173,
#Partially deleted in new
chrX	148006815	148026665	chrX:148006815-148026665	0	+	148006815	148025000	789624	5	27,94,149,128,164,	0,1802,18049,19095,19686,
#Deleted in new
chrX	148008099	148008215	chrX:148008099-148008215	3	-	148008099	148008099	8553170	1	116,	0,
#Deleted in new
chrX	148052232	148052746	chrX:148052232-148052746	7	+	148052232	148052232	16724991	1	514,	0,
#Deleted in new
chrX	148198013	148198878	chrX:148198013-148198878	7	-	148198013	148198013	16724991	1	865,	0,
#Deleted in new
chrX	148464707	148465428	chrX:148464707-148465428	7	+	148464707	148464707	16724991	1	721,	0,
#Deleted in new
chrX	148498112	148500615	chrX:148498112-148500615	3	-	148498112	148498112	8553170	2	310,78,	0,2425,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chrX	148500618	149000663	chrX:148500618-149000663	3	+	148501097	148991332	789624	21	526,133,861,45,87,37,52,97,38,160,1011,122,223,290,64,137,72,94,53,191,9453,	0,151380,161289,309257,337028,342347,342763,385270,403602,452961,454984,457718,462096,466171,467010,472852,477314,477743,480119,486748,490592,
#Partially deleted in new
chrX	148500707	148994424	chrX:148500707-148994424	1	+	148501097	148991332	789624	20	437,121,861,45,37,52,97,38,160,1011,122,217,290,64,137,72,94,53,191,3214,	0,151291,161200,309168,342258,342674,385181,403513,452872,454895,457629,462007,466082,466921,472763,477225,477654,480030,486659,490503,
#Partially deleted in new
chrX	148501008	148904377	chrX:148501008-148904377	1	+	148501097	148904262	789624	8	136,121,861,45,37,34,97,157,	0,150990,160899,308867,341957,342373,384880,403212,
#Partially deleted in new
chrX	148501046	148991402	chrX:148501046-148991402	1	+	148501097	148991332	789624	20	98,133,861,45,37,34,97,38,160,1011,122,223,290,64,137,72,94,53,191,192,	0,150952,160861,308829,341919,342335,384842,403174,452533,454556,457290,461668,465743,466582,472424,476886,477315,479691,486320,490164,
#Deleted in new
chrX	148546877	148547397	chrX:148546877-148547397	3	+	148546877	148546877	8553170	2	289,154,	0,366,
#Boundary problem: need 18, got 0, diff 18, mapped 0.0
chrX	148719090	149000663	chrX:148719090-149000663	1	+	148719180	148991332	789624	18	141,45,37,52,97,38,160,1011,122,223,290,64,137,72,94,53,191,9453,	0,90785,123875,124291,166798,185130,234489,236512,239246,243624,247699,248538,254380,258842,259271,261647,268276,272120,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	148822163	148822448	chrX:148822163-148822448	3	-	148822163	148822163	8553170	1	285,	0,
#Deleted in new
chrX	149056715	149057166	chrX:149056715-149057166	7	+	149056715	149056715	16724991	2	192,68,	0,383,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	149476989	149505347	chrX:149476989-149505347	3	-	149482745	149505137	0	9	6229,174,127,171,201,89,178,137,313,	0,9935,13324,19356,21117,23959,26322,27167,28045,
#Partially deleted in new
chrX	149483089	149532994	chrX:149483089-149532994	0	-	149483089	149483089	8553170	3	129,174,113,	0,3835,49792,
#Partially deleted in new
chrX	149487130	149505347	chrX:149487130-149505347	1	-	149487287	149505137	0	8	183,127,171,201,89,178,137,313,	0,3183,9215,10976,13818,16181,17026,17904,
#Partially deleted in new
chrX	149487130	149505347	chrX:149487130-149505347	0	-	149491607	149505137	0	9	183,127,130,171,201,89,178,137,313,	0,3183,4407,9215,10976,13818,16181,17026,17904,
#Partially deleted in new
chrX	149487286	149504219	chrX:149487286-149504219	0	-	149502097	149504219	789624	8	27,127,171,201,89,103,178,63,	0,3027,9059,10820,13662,14788,16025,16870,
#Partially deleted in new
chrX	149495482	149498266	chrX:149495482-149498266	0	-	149495482	149495482	8553170	3	206,171,160,	0,863,2624,
#Deleted in new
chrX	149502659	149505280	chrX:149502659-149505280	1	-	149503189	149505137	789624	3	830,137,246,	0,1497,2375,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	149503470	149521096	chrX:149503470-149521096	0	-	149503470	149505137	789624	6	19,137,143,87,34,152,	0,686,1564,8063,11158,17474,
#Partially deleted in new
chrX	149511508	149526264	chrX:149511508-149526264	3	-	149511508	149511508	8553170	2	112,543,	0,14213,
#Deleted in new
chrX	149525000	149526043	chrX:149525000-149526043	7	+	149525000	149525000	16724991	2	76,300,	0,743,
#Deleted in new
chrX	149533011	149533883	chrX:149533011-149533883	0	-	149533011	149533011	8553170	2	44,254,	0,618,
#Deleted in new
chrX	149533295	149534347	chrX:149533295-149534347	0	-	149533295	149533295	8553170	2	692,144,	0,908,
#Partially deleted in new
chrX	149533738	149540793	chrX:149533738-149540793	0	-	149533738	149533738	8553170	5	154,171,82,58,99,	0,465,2435,4376,6956,
#Partially deleted in new
chrX	149533865	149540791	chrX:149533865-149540791	1	-	149533865	149533865	8553170	6	122,171,36,40,58,97,	0,338,2081,2308,4249,6829,
#Deleted in new
chrX	149533915	149534428	chrX:149533915-149534428	0	-	149533915	149533915	8553170	1	513,	0,
#Partially deleted in new
chrX	149533987	149540813	chrX:149533987-149540813	0	-	149533987	149533987	8553170	4	387,58,183,119,	0,4127,4736,6707,
#Partially deleted in new
chrX	149534099	149539304	chrX:149534099-149539304	0	-	149534099	149534099	8553170	5	275,82,146,58,228,	0,2074,3533,4015,4977,
#Partially deleted in new
chrX	149534223	149540454	chrX:149534223-149540454	0	-	149534223	149534223	8553170	5	151,82,58,183,82,	0,1950,3891,4500,6149,
#Deleted in new
chrX	149535935	149540959	chrX:149535935-149540959	0	-	149535935	149535935	8553170	5	278,110,58,183,265,	0,1697,2179,2788,4759,
#Deleted in new
chrX	149536043	149540842	chrX:149536043-149540842	0	-	149536043	149536043	8553170	4	212,58,183,148,	0,2071,2680,4651,
#Deleted in new
chrX	149536172	149540902	chrX:149536172-149540902	0	-	149536172	149536172	8553170	4	83,146,58,208,	0,1460,1942,4522,
#Partially deleted in new
chrX	149540354	149545720	chrX:149540354-149545720	0	+	149545630	149545720	789624	5	101,59,48,133,119,	0,386,1664,5013,5247,
#Partially deleted in new
chrX	149540629	149547309	chrX:149540629-149547309	3	+	149545630	149546962	789624	5	170,48,133,282,571,	0,1389,4738,4972,6109,
#Partially deleted in new
chrX	149540641	149547309	chrX:149540641-149547309	1	+	149545630	149546962	789624	4	1425,133,282,571,	0,4726,4960,6097,
#Partially deleted in new
chrX	149540973	149547034	chrX:149540973-149547034	1	+	149545630	149546962	789624	5	370,67,133,282,296,	0,1045,4394,4628,5765,
#Partially deleted in new
chrX	149540974	149547309	chrX:149540974-149547309	1	+	149545630	149546962	789624	5	369,48,133,282,571,	0,1044,4393,4627,5764,
#Partially deleted in new
chrX	149540982	149547154	chrX:149540982-149547154	1	+	149545630	149546962	789624	5	310,67,133,282,416,	0,1036,4385,4619,5756,
#Partially deleted in new
chrX	149540986	149549940	chrX:149540986-149549940	1	+	149545630	149549424	789624	6	357,48,133,282,179,525,	0,1032,4381,4615,5752,8429,
#Partially deleted in new
chrX	149541023	149550510	chrX:149541023-149550510	1	+	149545630	149549424	789624	6	103,48,133,282,179,1095,	0,995,4344,4578,5715,8392,
#Deleted in new
chrX	149541436	149542050	chrX:149541436-149542050	0	+	149541436	149541436	8553170	2	332,32,	0,582,
#Partially deleted in new
chrX	149542018	149547309	chrX:149542018-149547309	1	+	149545816	149546962	789624	4	67,133,116,571,	0,3349,3749,4720,
#Deleted in new
chrX	149544519	149549992	chrX:149544519-149549992	1	+	149545630	149549424	789624	5	365,133,282,179,577,	0,848,1082,2219,4896,
#Deleted in new
chrX	149545477	149547306	chrX:149545477-149547306	1	+	149545630	149546962	789624	2	406,568,	0,1261,
#Deleted in new
chrX	149548209	149549932	chrX:149548209-149549932	3	-	149548391	149549852	789624	2	701,563,	0,1160,
#Deleted in new
chrX	149581652	149587452	chrX:149581652-149587452	3	-	149582231	149583179	789624	4	1592,69,87,59,	0,1667,1894,5741,
#Deleted in new
chrX	149582592	149587444	chrX:149582592-149587444	0	-	149582592	149583179	789624	4	652,69,87,83,	0,727,954,4769,
#Deleted in new
chrX	149582837	149587453	chrX:149582837-149587453	0	-	149582837	149583179	789624	3	407,69,60,	0,482,4556,
#Deleted in new
chrX	149582887	149586883	chrX:149582887-149586883	0	-	149582887	149583179	789624	4	357,69,87,81,	0,432,659,3915,
#Deleted in new
chrX	149592514	149594716	chrX:149592514-149594716	3	-	149592591	149594700	789624	2	785,580,	0,1622,
#Partially deleted in new
chrX	149596555	149631912	chrX:149596555-149631912	3	-	149598010	149631580	789624	7	1700,124,177,84,208,177,370,	0,2998,3747,7431,12071,14731,34987,
#Partially deleted in new
chrX	149596555	149631719	chrX:149596555-149631719	0	-	149600379	149631580	789624	4	1700,124,177,177,	0,2998,3747,34987,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	149596555	149602220	chrX:149596555-149602220	0	-	149596555	149596555	8553170	3	1700,124,1918,	0,2998,3747,
#Partially deleted in new
chrX	149596556	149631912	chrX:149596556-149631912	1	-	149598010	149631580	789624	6	1699,124,177,84,208,370,	0,2997,3746,7430,12070,34986,
#Partially deleted in new
chrX	149596556	149600470	chrX:149596556-149600470	1	-	149598010	149600452	789624	4	626,995,124,168,	0,704,2997,3746,
#Partially deleted in new
chrX	149597964	149608751	chrX:149597964-149608751	0	-	149598010	149608751	789624	4	291,124,177,125,	0,1589,2338,10662,
#Partially deleted in new
chrX	149600304	149611463	chrX:149600304-149611463	0	-	149604066	149611463	789624	3	175,84,177,	0,3682,10982,
#Partially deleted in new
chrX	149603708	149631698	chrX:149603708-149631698	1	-	149603971	149631580	789624	4	362,208,177,156,	0,4918,7578,27834,
#Partially deleted in new
chrX	149605154	149631720	chrX:149605154-149631720	0	-	149608804	149631580	789624	5	47,79,203,177,178,	0,1576,3472,6132,26388,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	149608453	149611325	chrX:149608453-149611325	0	-	149608453	149608453	8553170	2	381,39,	0,2833,
#Partially deleted in new
chrX	149608691	149631682	chrX:149608691-149631682	0	-	149608691	149631580	789624	2	143,140,	0,22851,
#Deleted in new
chrX	149649173	149650124	chrX:149649173-149650124	7	-	149649173	149649173	16724991	1	951,	0,
#Partially deleted in new
chrX	149688227	149716459	chrX:149688227-149716459	0	+	149688975	149716459	789624	5	61,147,96,74,707,	0,610,26253,27376,27525,
#Partially deleted in new
chrX	149688236	149717266	chrX:149688236-149717266	0	+	149688236	149688236	8553170	7	52,75,83,138,1434,74,1514,	0,673,23526,23788,24906,27367,27516,
#Partially deleted in new
chrX	149688823	149717266	chrX:149688823-149717266	1	+	149688975	149716776	789624	4	161,96,74,1514,	0,25657,26780,26929,
#Deleted in new
chrX	149712077	149717248	chrX:149712077-149717248	3	+	149713159	149716776	789624	5	85,113,96,74,1496,	0,1065,2403,3526,3675,
#Deleted in new
chrX	149757796	149757895	chrX:149757796-149757895	7	+	149757796	149757796	16724991	1	99,	0,
#Deleted in new
chrX	149758020	149758295	chrX:149758020-149758295	7	-	149758020	149758020	16724991	1	275,	0,
#Deleted in new
chrX	149760778	149760874	chrX:149760778-149760874	7	+	149760778	149760778	16724991	1	96,	0,
#Partially deleted in new
chrX	149768896	149771368	chrX:149768896-149771368	7	+	149768896	149768896	16724991	3	177,124,245,	0,802,2227,
#Deleted in new
chrX	149774067	149776867	chrX:149774067-149776867	3	+	149774681	149776790	789624	2	1178,785,	0,2015,
#Deleted in new
chrX	149781929	149787737	chrX:149781929-149787737	3	+	149786210	149787158	789624	4	66,87,69,1592,	0,3827,4072,4216,
#Deleted in new
chrX	149808213	149809155	chrX:149808213-149809155	7	+	149808213	149808213	16724991	1	942,	0,
#Deleted in new
chrX	149817169	149817644	chrX:149817169-149817644	7	+	149817169	149817169	16724991	1	475,	0,
#Partially deleted in new
chrX	149878835	149881070	chrX:149878835-149881070	3	-	149878835	149878835	8553170	5	161,93,58,97,67,	0,430,965,1260,2168,
#Partially deleted in new
chrX	149881140	149885835	chrX:149881140-149885835	1	+	149884272	149885229	789624	4	145,279,62,1626,	0,1930,2932,3069,
#Partially deleted in new
chrX	149881140	149885835	chrX:149881140-149885835	3	+	149884272	149885229	789624	3	145,313,1626,	0,2681,3069,
#Partially deleted in new
chrX	149881194	149885834	chrX:149881194-149885834	1	+	149884272	149885229	789624	3	91,62,1625,	0,2878,3015,
#Partially deleted in new
chrX	149881219	149884564	chrX:149881219-149884564	0	+	149881219	149881219	8553170	3	66,313,355,	0,2602,2990,
#Partially deleted in new
chrX	149881220	149884554	chrX:149881220-149884554	0	+	149881220	149881220	8553170	4	65,279,62,345,	0,1850,2852,2989,
#Partially deleted in new
chrX	149929526	149938435	chrX:149929526-149938435	1	-	149930072	149933874	789624	6	555,179,282,133,48,243,	0,3062,4095,4478,7906,8666,
#Deleted in new
chrX	149929644	149931287	chrX:149929644-149931287	3	+	149929644	149931105	789624	2	483,701,	0,942,
#Partially deleted in new
chrX	149932196	149938811	chrX:149932196-149938811	3	-	149932543	149933874	789624	5	571,282,133,48,619,	0,1425,1808,5236,5996,
#Partially deleted in new
chrX	149932197	149937514	chrX:149932197-149937514	1	-	149932543	149933874	789624	4	570,282,133,82,	0,1424,1807,5235,
#Partially deleted in new
chrX	149932200	149938459	chrX:149932200-149938459	1	-	149932543	149933874	789624	5	567,282,133,67,267,	0,1421,1804,5213,5992,
#Partially deleted in new
chrX	149932578	149938472	chrX:149932578-149938472	0	-	149932578	149933874	789624	6	189,282,133,197,48,280,	0,1043,1426,1798,4854,5614,
#Partially deleted in new
chrX	149933737	149938461	chrX:149933737-149938461	0	-	149933737	149933874	789624	5	166,133,192,48,269,	0,267,639,3695,4455,
#Deleted in new
chrX	149937448	149938700	chrX:149937448-149938700	0	-	149937448	149937448	8553170	2	32,559,	0,693,
#Boundary problem: need 15, got 0, diff 15, mapped 0.0
chrX	149938627	150224580	chrX:149938627-150224580	0	+	149938627	149938627	8553170	15	159,228,183,58,146,112,83,1490,98,89,184,80,142,122,240,	0,2031,2429,3162,3556,5023,5390,7230,9450,9678,22137,284538,284839,285364,285713,
#Deleted in new
chrX	149939738	149940832	chrX:149939738-149940832	1	+	149939738	149939738	8553170	2	373,174,	0,920,
#Partially deleted in new
chrX	149940155	150016787	chrX:149940155-150016787	0	+	149940155	149940155	789624	12	8,228,58,146,83,1490,89,184,134,190,164,177,	0,503,1634,2028,3862,5702,8150,20609,22427,75795,76181,76455,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	149945632	149952906	chrX:149945632-149952906	3	+	149945632	149945632	8553170	3	1715,89,557,	0,2673,6717,
#Deleted in new
chrX	149945975	149946938	chrX:149945975-149946938	1	+	149945975	149945975	8553170	2	53,697,	0,266,
#Deleted in new
chrX	149946345	149947217	chrX:149946345-149947217	1	+	149946345	149946345	8553170	2	254,44,	0,828,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	149947370	149953052	chrX:149947370-149953052	1	+	149947370	149947370	8553170	3	805,89,703,	0,935,4979,
#Deleted in new
chrX	149960880	149962798	chrX:149960880-149962798	1	+	149960880	149960880	8553170	2	68,216,	0,1702,
#Deleted in new
chrX	150016081	150017644	chrX:150016081-150017644	1	+	150016081	150016081	8553170	4	59,164,34,146,	0,255,529,1417,
#Deleted in new
chrX	150114377	150116520	chrX:150114377-150116520	7	+	150114377	150114377	16724991	1	2143,	0,
#Partially deleted in new
chrX	150228003	150228083	chrX:150228003-150228083	3	+	150228003	150228003	5263520	1	80,	0,
#Partially deleted in new
chrX	150231074	150232896	chrX:150231074-150232896	7	-	150231074	150231074	16724991	1	1822,	0,
#Partially deleted in new
chrX	150361421	150470095	chrX:150361421-150470095	0	+	150361421	150361421	8553170	3	278,70,351,	0,1395,108323,
#Partially deleted in new
chrX	150363283	150514178	chrX:150363283-150514178	3	+	150445516	150510002	789624	8	247,159,75,1746,123,244,85,2175,	0,82170,99488,106461,110396,139990,146678,148720,
#Partially deleted in new
chrX	150363418	150513125	chrX:150363418-150513125	1	+	150445516	150513073	789624	5	112,159,1746,85,1122,	0,82035,106326,146543,148585,
#Partially deleted in new
chrX	150445453	150514178	chrX:150445453-150514178	1	+	150445516	150510002	789624	7	159,75,1746,123,244,85,2175,	0,17318,24291,28226,57820,64508,66550,
#Partially deleted in new
chrX	150445453	150514178	chrX:150445453-150514178	1	+	150445516	150510002	789624	6	159,1746,123,244,85,2175,	0,24291,28226,57820,64508,66550,
#Deleted in new
chrX	150509324	150514169	chrX:150509324-150514169	0	+	150509324	150509324	8553170	2	722,2166,	0,2679,
#Partially deleted in new
chrX	150568618	150673322	chrX:150568618-150673322	3	+	150592614	150671595	789624	15	44,73,73,95,111,102,84,150,189,186,207,93,114,177,1895,	0,23986,27879,29973,45970,50419,70324,72650,77064,81097,89202,91045,91752,94814,102809,
#Partially deleted in new
chrX	150568621	150639021	chrX:150568621-150639021	0	+	150592614	150639021	789624	5	41,73,73,95,79,	0,23983,27876,29970,70321,
#Partially deleted in new
chrX	150568624	150596993	chrX:150568624-150596993	0	+	150568624	150568624	8553170	3	38,73,496,	0,23980,27873,
#Partially deleted in new
chrX	150568633	150672874	chrX:150568633-150672874	0	+	150568633	150568633	8553170	14	29,73,73,84,52,84,150,189,186,207,93,114,177,1444,	0,23971,27864,29958,50454,70309,72635,77049,81082,89187,91030,91737,94799,102797,
#Partially deleted in new
chrX	150568638	150645871	chrX:150568638-150645871	0	+	150568638	150568638	8553170	8	24,73,73,111,102,84,150,189,	0,23966,27859,45950,50399,70304,72630,77044,
#Partially deleted in new
chrX	150692970	150731475	chrX:150692970-150731475	0	+	150718654	150731475	789624	9	99,106,24,76,95,108,102,84,6,	0,6224,19371,25654,34244,34713,37138,37554,38499,
#Partially deleted in new
chrX	150692977	150730129	chrX:150692977-150730129	0	+	150718654	150730129	789624	8	92,106,24,51,76,95,108,21,	0,6217,19364,21501,25647,34237,34706,37131,
#Partially deleted in new
chrX	150692982	150730122	chrX:150692982-150730122	0	+	150718654	150730122	789624	8	87,106,24,54,76,95,108,14,	0,6212,19359,21496,25642,34232,34701,37126,
#Partially deleted in new
chrX	150693008	150730120	chrX:150693008-150730120	0	+	150718654	150730120	789624	9	61,98,24,24,51,76,95,108,12,	0,6194,19333,19721,21470,25616,34206,34675,37100,
#Partially deleted in new
chrX	150693365	150765102	chrX:150693365-150765102	0	+	150693530	150751080	0	17	311,106,76,95,108,102,84,150,189,186,207,93,114,211,177,173,591,	0,5829,25259,33849,34318,36743,37159,38104,39176,43229,43876,50995,57364,57664,62323,69199,71146,
#Partially deleted in new
chrX	150693373	150765103	chrX:150693373-150765103	3	+	150693530	150762729	0	16	303,106,76,95,108,102,84,150,189,186,207,93,114,177,173,592,	0,5821,25251,33841,34310,36735,37151,38096,39168,43221,43868,50987,57356,62315,69191,71138,
#Partially deleted in new
chrX	150693378	150727770	chrX:150693378-150727770	0	+	150693530	150727765	789624	6	298,106,51,76,95,87,	0,5816,21100,25246,33836,34305,
#Partially deleted in new
chrX	150693395	150735499	chrX:150693395-150735499	1	+	150693530	150735499	789624	10	281,106,76,95,108,102,84,150,189,36,	0,5799,25229,33819,34288,36713,37129,38074,39146,42068,
#Partially deleted in new
chrX	150693409	150765102	chrX:150693409-150765102	1	+	150693530	150762729	789624	16	267,106,24,76,95,108,102,84,150,189,186,207,93,114,177,2538,	0,5785,18932,25215,33805,34274,36699,37115,38060,39132,43185,43832,50951,57320,62279,69155,
#Partially deleted in new
chrX	150699207	150727765	chrX:150699207-150727765	0	+	150699207	150727765	789624	7	93,24,27,51,76,95,82,	0,13134,13736,15271,19417,28007,28476,
#Partially deleted in new
chrX	150699207	150727765	chrX:150699207-150727765	0	+	150699207	150727765	789624	6	93,24,27,76,95,82,	0,13134,13736,19417,28007,28476,
#Partially deleted in new
chrX	150718676	150764924	chrX:150718676-150764924	0	+	150718676	150751080	789624	13	24,95,108,102,84,150,189,207,93,114,211,177,413,	0,8538,9007,11432,11848,12793,13865,18565,25684,32053,32353,37012,45835,
#Partially deleted in new
chrX	150727112	150730565	chrX:150727112-150730565	0	+	150727112	150727112	8553170	4	197,108,102,41,	0,571,2996,3412,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	150735398	150751289	chrX:150735398-150751289	0	+	150735398	150735398	8553170	5	1382,207,93,114,260,	0,1843,8962,15331,15631,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	150766336	150898630	chrX:150766336-150898630	0	-	150829296	150898588	789624	12	2765,66,120,147,66,84,69,75,72,1299,63,109,	0,3967,9837,10999,27354,28869,29081,48525,49670,61969,64894,132185,
#Partially deleted in new
chrX	150766336	150898706	chrX:150766336-150898706	1	-	150769033	150898588	789624	11	2765,66,120,39,66,84,69,75,72,63,185,	0,3967,9837,11107,27354,28869,29081,48525,49670,64894,132185,
#Partially deleted in new
chrX	150766338	150898816	chrX:150766338-150898816	1	-	150769033	150898588	789624	8	2763,66,120,39,75,72,63,295,	0,3965,9835,11105,48523,49668,64892,132183,
#Partially deleted in new
chrX	150766338	150898816	chrX:150766338-150898816	1	-	150769033	150898588	789624	12	2763,66,18,120,39,66,84,69,87,72,63,295,	0,3965,5466,9835,11105,27352,28867,29079,48523,49668,64892,132183,
#Partially deleted in new
chrX	150768366	150898626	chrX:150768366-150898626	1	-	150769033	150898588	789624	8	735,66,120,39,66,84,63,105,	0,1937,7807,9077,25324,26839,62864,130155,
#Partially deleted in new
chrX	150768728	150898629	chrX:150768728-150898629	3	-	150769033	150898588	789624	9	373,66,120,39,66,84,69,63,108,	0,1575,7445,8715,24962,26477,26689,62502,129793,
#Partially deleted in new
chrX	150768976	150814864	chrX:150768976-150814864	0	-	150769033	150814864	789624	9	125,66,18,120,39,66,84,69,3,	0,1327,2828,7197,8467,24714,26229,26441,45885,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	150776901	150831248	chrX:150776901-150831248	0	-	150777393	150831248	789624	7	581,66,84,69,75,72,18,	0,16789,18304,18516,37960,39105,54329,
#Partially deleted in new
chrX	150814899	150898609	chrX:150814899-150898609	0	-	150814899	150814899	8553170	5	37,72,177,63,88,	0,1107,1379,16331,83622,
#Partially deleted in new
chrX	150818752	150819246	chrX:150818752-150819246	7	+	150818752	150818752	16724991	1	494,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	150955493	150955587	chrX:150955493-150955587	3	-	150955493	150955493	8553170	1	94,	0,
#Partially deleted in new
chrX	150980508	150987877	chrX:150980508-150987877	0	+	150985599	150987877	789624	5	136,155,140,175,101,	0,5086,5542,6619,7268,
#Partially deleted in new
chrX	150983285	150990775	chrX:150983285-150990775	3	+	150985599	150987914	0	5	91,155,140,175,2999,	0,2309,2765,3842,4491,
#Partially deleted in new
chrX	150983384	150987892	chrX:150983384-150987892	0	+	150985599	150987892	789624	5	207,155,140,175,116,	0,2210,2666,3743,4392,
#Partially deleted in new
chrX	150983405	150987932	chrX:150983405-150987932	1	+	150985599	150987914	0	5	186,155,140,175,156,	0,2189,2645,3722,4371,
#Partially deleted in new
chrX	150985530	150987297	chrX:150985530-150987297	0	+	150985599	150987297	789624	3	219,140,170,	0,520,1597,
#Partially deleted in new
chrX	150993500	150994091	chrX:150993500-150994091	7	+	150993500	150993500	16724991	1	591,	0,
#Deleted in new
chrX	151023606	151023722	chrX:151023606-151023722	7	-	151023606	151023606	16724991	1	116,	0,
#Deleted in new
chrX	151026294	151026406	chrX:151026294-151026406	3	-	151026294	151026294	8553170	1	112,	0,
#Deleted in new
chrX	151168221	151168326	chrX:151168221-151168326	3	+	151168221	151168221	5263520	1	105,	0,
#Deleted in new
chrX	151175191	151177836	chrX:151175191-151177836	3	-	151175191	151175191	789624	3	1079,81,460,	0,1603,2185,
#Deleted in new
chrX	151176652	151181465	chrX:151176652-151181465	3	+	151176721	151181437	789624	2	256,1695,	0,3118,
#Deleted in new
chrX	151182385	151182855	chrX:151182385-151182855	3	+	151182385	151182385	8553170	1	470,	0,
#Deleted in new
chrX	151226228	151227715	chrX:151226228-151227715	7	-	151226228	151226228	16724991	1	1487,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	151275508	151275789	chrX:151275508-151275789	3	+	151275508	151275508	8553170	1	281,	0,
#Partially deleted in new
chrX	151396514	151405157	chrX:151396514-151405157	0	+	151396514	151396514	8553170	3	133,110,242,	0,7116,8401,
#Partially deleted in new
chrX	151396565	151405157	chrX:151396565-151405157	1	+	151396839	151405058	789624	4	82,259,110,242,	0,233,7065,8350,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	151397203	151409364	chrX:151397203-151409364	3	+	151397308	151405058	789624	3	158,110,4449,	0,6427,7712,
#Deleted in new
chrX	151497725	151498354	chrX:151497725-151498354	3	+	151497725	151497725	8553170	2	65,370,	0,259,
#Deleted in new
chrX	151515550	151516245	chrX:151515550-151516245	3	+	151515550	151515550	789624	2	130,352,	0,343,
#Partially deleted in new
chrX	151563621	151676739	chrX:151563621-151676739	3	+	151601553	151676143	789624	16	218,55,89,90,100,111,128,83,88,124,230,159,207,479,259,743,	0,37905,41024,48042,57308,57860,59315,61826,84993,96091,100497,107416,107951,108561,110306,112375,
#Partially deleted in new
chrX	151563728	151676515	chrX:151563728-151676515	0	+	151563728	151563728	8553170	15	111,55,89,90,100,111,128,83,88,124,230,159,207,2004,519,	0,37798,40917,47935,57201,57753,59208,61719,84886,95984,100390,107309,107844,108454,112268,
#Partially deleted in new
chrX	151611663	151671196	chrX:151611663-151671196	7	+	151611663	151611663	16724991	6	90,100,111,67,88,159,	0,9266,9818,29382,34026,59374,
#Partially deleted in new
chrX	151695123	151700144	chrX:151695123-151700144	0	+	151698814	151700144	789624	3	152,38,149,	0,3660,4872,
#Partially deleted in new
chrX	151695257	151701591	chrX:151695257-151701591	1	+	151698814	151701033	789624	4	18,38,161,1086,	0,3526,4738,5248,
#Partially deleted in new
chrX	151695478	151700721	chrX:151695478-151700721	1	+	151698814	151700273	789624	4	66,38,330,216,	0,3305,4493,5027,
#Deleted in new
chrX	151698306	151705924	chrX:151698306-151705924	3	+	151698814	151701033	789624	4	359,38,161,5419,	0,477,1689,2199,
#Deleted in new
chrX	151700550	151705503	chrX:151700550-151705503	0	+	151700550	151705400	789624	2	143,236,	0,4717,
#Partially deleted in new
chrX	151716034	151723194	chrX:151716034-151723194	3	+	151716119	151722759	789624	5	191,128,107,79,567,	0,1237,5360,5868,6593,
#Partially deleted in new
chrX	151716143	151722788	chrX:151716143-151722788	0	+	151716143	151721935	789624	4	82,128,79,161,	0,1128,5759,6484,
#Deleted in new
chrX	151738450	151745304	chrX:151738450-151745304	3	+	151738483	151744498	789624	6	143,93,171,108,107,2212,	0,336,1111,2343,4085,4642,
#Partially deleted in new
chrX	151904430	151911455	chrX:151904430-151911455	3	-	151904430	151904430	8553170	3	359,58,433,	0,2911,6592,
#Partially deleted in new
chrX	151904431	151911199	chrX:151904431-151911199	0	-	151904431	151904431	789624	2	358,177,	0,6591,
#Partially deleted in new
chrX	151909452	151913968	chrX:151909452-151913968	1	-	151909452	151909452	8553170	5	371,61,119,163,86,	0,1570,2956,3339,4430,
#Deleted in new
chrX	151912508	151924179	chrX:151912508-151924179	0	+	151923664	151924179	789624	4	34,168,72,580,	0,293,10944,11091,
#Deleted in new
chrX	151912888	151925170	chrX:151912888-151925170	3	+	151923664	151924618	0	3	81,72,1571,	0,10564,10711,
#Deleted in new
chrX	151913462	151924315	chrX:151913462-151924315	0	+	151923664	151924315	789624	3	126,72,716,	0,9990,10137,
#Deleted in new
chrX	151913504	151925170	chrX:151913504-151925170	1	+	151923664	151924618	0	3	84,72,1571,	0,9948,10095,
#Deleted in new
chrX	151914151	151924388	chrX:151914151-151924388	0	+	151923664	151924388	789624	3	125,72,789,	0,9301,9448,
#Deleted in new
chrX	151914829	151924388	chrX:151914829-151924388	0	+	151923664	151924388	789624	3	129,72,789,	0,8623,8770,
#Deleted in new
chrX	151915507	151925170	chrX:151915507-151925170	1	+	151923664	151924618	0	3	130,72,1571,	0,7945,8092,
#Deleted in new
chrX	151916194	151924355	chrX:151916194-151924355	0	+	151923664	151924355	789624	2	126,903,	0,7258,
#Deleted in new
chrX	151916194	151924315	chrX:151916194-151924315	0	+	151923664	151924315	789624	3	126,72,716,	0,7258,7405,
#Deleted in new
chrX	151916873	151924388	chrX:151916873-151924388	0	+	151923664	151924388	789624	3	129,72,789,	0,6579,6726,
#Deleted in new
chrX	151916924	151925170	chrX:151916924-151925170	1	+	151923664	151924618	0	3	78,72,1571,	0,6528,6675,
#Deleted in new
chrX	151917551	151925170	chrX:151917551-151925170	1	+	151923664	151924618	0	3	130,72,1571,	0,5901,6048,
#Deleted in new
chrX	151918226	151925170	chrX:151918226-151925170	1	+	151923664	151924618	0	3	130,72,1571,	0,5226,5373,
#Deleted in new
chrX	151918901	151924388	chrX:151918901-151924388	0	+	151923664	151924388	789624	3	136,72,789,	0,4551,4698,
#Partially deleted in new
chrX	151953123	151974679	chrX:151953123-151974679	3	-	151954700	151974625	789624	9	1961,200,153,138,83,221,68,218,110,	0,2244,2584,6715,8159,9299,16545,17061,21446,
#Deleted in new
chrX	151953124	151956470	chrX:151953124-151956470	0	-	151953124	151953124	8553170	4	1960,200,153,434,	0,2243,2583,2912,
#Deleted in new
chrX	151953124	151959723	chrX:151953124-151959723	0	-	151953124	151953124	8553170	3	1960,200,4016,	0,2243,2583,
#Deleted in new
chrX	151955052	151955913	chrX:151955052-151955913	0	-	151955052	151955052	8553170	2	32,206,	0,655,
#Deleted in new
chrX	151955103	151955835	chrX:151955103-151955835	0	-	151955103	151955103	8553170	2	464,128,	0,604,
#Deleted in new
chrX	151955396	151957512	chrX:151955396-151957512	0	-	151955396	151955396	8553170	3	171,153,326,	0,311,1790,
#Partially deleted in new
chrX	151957282	151974680	chrX:151957282-151974680	0	-	151971241	151974625	789624	8	204,186,138,221,68,218,178,111,	0,1681,2556,5140,12386,12902,13857,17287,
#Deleted in new
chrX	151958577	151958658	chrX:151958577-151958658	3	-	151958577	151958577	5263520	1	81,	0,
#Partially deleted in new
chrX	151958645	151962593	chrX:151958645-151962593	0	-	151958645	151958645	8553170	3	504,138,171,	0,1193,3777,
#Deleted in new
chrX	151959627	151959712	chrX:151959627-151959712	3	-	151959627	151959627	5263520	1	85,	0,
#Partially deleted in new
chrX	151961224	151969736	chrX:151961224-151969736	0	-	151961224	151961224	8553170	3	141,221,68,	0,1198,8444,
#Deleted in new
chrX	151969398	151970552	chrX:151969398-151970552	0	-	151969398	151969398	8553170	2	338,368,	0,786,
#Deleted in new
chrX	151969851	151972660	chrX:151969851-151972660	0	-	151969851	151969851	8553170	2	551,1521,	0,1288,
#Deleted in new
chrX	151970056	151974664	chrX:151970056-151974664	0	-	151971241	151974625	789624	3	346,178,95,	0,1083,4513,
#Partially deleted in new
chrX	152045313	152046193	chrX:152045313-152046193	7	-	152045313	152045313	16724991	1	880,	0,
#Partially deleted in new
chrX	152114598	152115540	chrX:152114598-152115540	7	-	152114598	152114598	16724991	1	942,	0,
#Partially deleted in new
chrX	152114993	152138521	chrX:152114993-152138521	1	-	152114993	152114993	8553170	4	612,87,125,47,	0,687,14495,23481,
#Partially deleted in new
chrX	152114993	152138493	chrX:152114993-152138493	0	-	152114993	152114993	8553170	3	612,87,19,	0,687,23481,
#Partially deleted in new
chrX	152128340	152138556	chrX:152128340-152138556	2	-	152128340	152128340	8553170	7	17,125,123,74,91,99,82,	0,1148,7222,7420,7649,8530,10134,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	152133309	152138553	chrX:152133309-152138553	1	-	152134510	152135620	789624	4	2376,74,99,79,	0,2451,3561,5165,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	152133312	152138578	chrX:152133312-152138578	3	-	152134510	152135620	789624	5	2373,74,91,99,104,	0,2448,2677,3558,5162,
#Deleted in new
chrX	152135067	152138510	chrX:152135067-152138510	0	-	152135067	152135620	789624	5	618,74,19,34,36,	0,693,994,1803,3407,
#Deleted in new
chrX	152135135	152138561	chrX:152135135-152138561	0	-	152135135	152135620	789624	5	550,74,91,99,87,	0,625,854,1735,3339,
#Deleted in new
chrX	152135407	152138540	chrX:152135407-152138540	0	-	152135407	152135620	789624	5	278,74,19,99,66,	0,353,654,1463,3067,
#Deleted in new
chrX	152135445	152138528	chrX:152135445-152138528	0	-	152135445	152135620	789624	4	240,320,99,54,	0,315,1425,3029,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	152138882	152186857	chrX:152138882-152186857	3	+	152138882	152138882	8553170	4	52,57,392,50,	0,1132,25314,47925,
#Partially deleted in new
chrX	152166233	152451358	chrX:152166233-152451358	3	-	152168227	152364570	789624	10	2330,212,153,144,83,221,68,122,166,213,	0,23496,31399,41767,58529,89544,118434,179347,198197,284912,
#Partially deleted in new
chrX	152168227	152389497	chrX:152168227-152389497	1	-	152168227	152364570	789624	10	336,212,153,144,83,221,68,122,166,192,	0,21502,29405,39773,56535,87550,116440,177353,196203,221078,
#Deleted in new
chrX	152187208	152189943	chrX:152187208-152189943	0	-	152187208	152187208	8553170	2	170,214,	0,2521,
#Deleted in new
chrX	152250571	152250676	chrX:152250571-152250676	3	-	152250571	152250571	8553170	1	105,	0,
#Partially deleted in new
chrX	152251057	152255998	chrX:152251057-152255998	0	-	152251057	152251057	8553170	2	117,221,	0,4720,
#Partially deleted in new
chrX	152392218	152392299	chrX:152392218-152392299	3	-	152392218	152392218	5263520	1	81,	0,
#Partially deleted in new
chrX	152393420	152393529	chrX:152393420-152393529	3	-	152393420	152393420	5263520	1	109,	0,
#Partially deleted in new
chrX	152394411	152394492	chrX:152394411-152394492	3	-	152394411	152394411	5263520	1	81,	0,
#Deleted in new
chrX	152479576	152481024	chrX:152479576-152481024	7	+	152479576	152479576	16724991	1	1448,	0,
#Partially deleted in new
chrX	152638182	152657534	chrX:152638182-152657534	3	+	152638202	152653281	789624	9	169,89,68,221,83,138,153,257,4994,	0,2195,7344,8765,11068,11559,12245,13343,14358,
#Deleted in new
chrX	152682809	152683842	chrX:152682809-152683842	7	+	152682809	152682809	16724991	2	74,881,	0,152,
#Deleted in new
chrX	152698751	152702347	chrX:152698751-152702347	3	+	152700832	152701777	0	3	78,66,1580,	0,1870,2016,
#Deleted in new
chrX	152698766	152701427	chrX:152698766-152701427	0	+	152700832	152701427	789624	3	63,130,660,	0,1791,2001,
#Deleted in new
chrX	152698766	152702336	chrX:152698766-152702336	1	+	152700832	152701777	0	3	63,130,1569,	0,1791,2001,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	152708260	152714549	chrX:152708260-152714549	0	-	152708260	152708260	8553170	5	380,173,115,60,61,	0,574,1200,4995,6228,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	152708263	152709265	chrX:152708263-152709265	3	-	152708570	152709112	789624	2	377,467,	0,535,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	152708263	152709265	chrX:152708263-152709265	1	-	152708570	152709112	789624	2	377,416,	0,586,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	152708570	152709260	chrX:152708570-152709260	1	-	152708570	152709260	789624	3	69,152,16,	0,278,674,
#Deleted in new
chrX	152714585	152718606	chrX:152714585-152718606	3	+	152717106	152718051	789624	5	97,120,98,66,1565,	0,1371,2062,2310,2456,
#Deleted in new
chrX	152714592	152717074	chrX:152714592-152717074	0	+	152714592	152714592	8553170	4	90,120,66,33,	0,1364,2303,2449,
#Deleted in new
chrX	152714600	152718607	chrX:152714600-152718607	1	+	152717106	152718051	789624	3	82,66,1566,	0,2295,2441,
#Deleted in new
chrX	152714608	152717562	chrX:152714608-152717562	0	+	152717106	152717562	789624	5	74,120,98,66,521,	0,1348,2039,2287,2433,
#Deleted in new
chrX	152714627	152717373	chrX:152714627-152717373	0	+	152717106	152717373	789624	6	55,79,120,98,66,332,	0,451,1329,2020,2268,2414,
#Deleted in new
chrX	152714629	152717217	chrX:152714629-152717217	0	+	152717106	152717217	789624	6	53,82,79,120,66,176,	0,217,449,1327,2266,2412,
#Deleted in new
chrX	152714641	152717466	chrX:152714641-152717466	0	+	152717106	152717466	789624	4	41,120,66,425,	0,1315,2254,2400,
#Deleted in new
chrX	152714646	152716706	chrX:152714646-152716706	0	+	152714646	152714646	8553170	4	36,311,120,59,	0,200,1310,2001,
#Deleted in new
chrX	152714680	152717551	chrX:152714680-152717551	0	+	152717106	152717551	789624	3	177,66,510,	0,2215,2361,
#Deleted in new
chrX	152714684	152717207	chrX:152714684-152717207	0	+	152717106	152717207	789624	3	173,106,166,	0,1272,2357,
#Deleted in new
chrX	152714690	152717092	chrX:152714690-152717092	0	+	152714690	152714690	8553170	4	467,120,66,51,	0,1266,2205,2351,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	152727483	152733699	chrX:152727483-152733699	0	-	152728163	152732460	789624	4	380,158,60,32,	0,590,4961,6184,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	152727483	152733735	chrX:152727483-152733735	3	-	152727793	152732460	789624	5	380,151,60,216,68,	0,590,4961,5537,6184,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	152727483	152733691	chrX:152727483-152733691	1	-	152728018	152732460	789624	4	741,60,212,24,	0,4961,5541,6184,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	152727486	152733706	chrX:152727486-152733706	1	-	152727793	152732460	789624	4	377,151,60,39,	0,587,4958,6181,
#Deleted in new
chrX	152733778	152737669	chrX:152733778-152737669	3	+	152736161	152737106	789624	2	81,1583,	0,2308,
#Deleted in new
chrX	152733778	152737660	chrX:152733778-152737660	1	+	152736161	152737106	789624	3	81,106,1574,	0,1369,2308,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	152733826	152740985	chrX:152733826-152740985	7	+	152733826	152733826	16724991	4	33,197,151,374,	0,5856,6424,6785,
#Deleted in new
chrX	152733861	152737106	chrX:152733861-152737106	1	+	152736161	152737106	789624	3	173,106,1020,	0,1286,2225,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	152739863	152740681	chrX:152739863-152740681	5	+	152739863	152739863	16724991	3	16,151,70,	0,387,748,
#Deleted in new
chrX	152746816	152747762	chrX:152746816-152747762	3	+	152746816	152746816	8553170	2	201,647,	0,299,
#Deleted in new
chrX	152749862	152753884	chrX:152749862-152753884	1	-	152750418	152751363	789624	4	1566,66,120,272,	0,1646,2531,3750,
#Deleted in new
chrX	152749862	152753884	chrX:152749862-152753884	3	-	152750418	152751363	789624	5	1566,66,98,120,97,	0,1646,1862,2531,3925,
#Deleted in new
chrX	152749863	152753884	chrX:152749863-152753884	1	-	152750418	152751363	789624	2	1565,97,	0,3924,
#Deleted in new
chrX	152749863	152753884	chrX:152749863-152753884	1	-	152750418	152751363	789624	3	1565,66,97,	0,1645,3924,
#Deleted in new
chrX	152749863	152753884	chrX:152749863-152753884	1	-	152750418	152751363	789624	6	1565,66,120,79,82,97,	0,1645,2530,3449,3678,3924,
#Deleted in new
chrX	152749863	152753884	chrX:152749863-152753884	1	-	152750418	152751363	789624	6	1565,66,98,120,79,97,	0,1645,1861,2530,3449,3924,
#Deleted in new
chrX	152749875	152753878	chrX:152749875-152753878	1	-	152750418	152751363	789624	4	1553,66,120,91,	0,1633,2518,3912,
#Deleted in new
chrX	152751121	152753842	chrX:152751121-152753842	0	-	152751121	152751363	789624	6	307,66,98,120,79,55,	0,387,603,1272,2191,2666,
#Deleted in new
chrX	152751252	152753840	chrX:152751252-152753840	0	-	152751252	152751363	789624	6	176,66,120,79,82,53,	0,256,1141,2060,2289,2535,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	152753920	152760222	chrX:152753920-152760222	0	+	152753920	152753920	789624	5	61,60,115,173,380,	0,1234,4986,5555,5922,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	152759217	152760219	chrX:152759217-152760219	3	+	152759370	152759912	789624	2	467,377,	0,625,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	152759217	152760219	chrX:152759217-152760219	1	+	152759370	152759912	789624	2	416,377,	0,625,
#Deleted in new
chrX	152766135	152769747	chrX:152766135-152769747	3	-	152766705	152767650	789624	3	1580,66,94,	0,1660,3518,
#Deleted in new
chrX	152766146	152769716	chrX:152766146-152769716	1	-	152766705	152767650	789624	3	1569,130,63,	0,1649,3507,
#Deleted in new
chrX	152766943	152769677	chrX:152766943-152769677	0	-	152766943	152767650	789624	4	772,66,59,24,	0,852,2275,2710,
#Deleted in new
chrX	152767046	152769716	chrX:152767046-152769716	0	-	152767046	152767650	789624	3	669,130,63,	0,749,2607,
#Partially deleted in new
chrX	152826972	152830777	chrX:152826972-152830777	3	-	152827840	152830710	0	5	958,138,129,159,70,	0,1564,2176,2629,3735,
#Partially deleted in new
chrX	152827809	152829697	chrX:152827809-152829697	0	-	152827809	152827809	8553170	3	121,741,96,	0,727,1792,
#Partially deleted in new
chrX	152830966	152869729	chrX:152830966-152869729	3	+	152846324	152869116	789624	8	151,151,159,147,129,143,103,946,	0,15315,19298,27803,31629,34852,36604,37817,
#Partially deleted in new
chrX	152830966	152869363	chrX:152830966-152869363	1	+	152846324	152869116	789624	9	151,67,151,159,147,129,143,103,580,	0,667,15315,19298,27803,31629,34852,36604,37817,
#Partially deleted in new
chrX	152830996	152867647	chrX:152830996-152867647	0	+	152846324	152867647	789624	8	121,67,151,159,147,129,143,77,	0,637,15285,19268,27773,31599,34822,36574,
#Partially deleted in new
chrX	152914441	152973480	chrX:152914441-152973480	1	+	152914489	152970541	789624	21	82,124,66,39,78,90,99,84,39,84,105,99,90,198,198,111,81,72,103,99,2207,	0,268,696,2689,2843,3623,4541,5886,6268,7731,17230,18431,23632,30825,45257,49397,51005,52725,54940,56001,56832,
#Partially deleted in new
chrX	152914441	152973480	chrX:152914441-152973480	1	+	152914489	152970541	789624	23	82,124,66,39,78,90,99,84,42,84,90,87,105,99,90,198,198,111,81,72,103,99,2207,	0,268,696,2689,2843,3623,4541,5886,6265,7731,8278,14133,17230,18431,23632,30825,45257,49397,51005,52725,54940,56001,56832,
#Partially deleted in new
chrX	152914441	152973480	chrX:152914441-152973480	1	+	152914489	152970541	789624	24	82,124,66,39,78,90,99,84,39,84,90,87,105,99,96,90,198,198,111,81,72,103,99,2207,	0,268,696,2689,2843,3623,4541,5886,6268,7731,8278,14133,17230,18431,21976,23632,30825,45257,49397,51005,52725,54940,56001,56832,
#Partially deleted in new
chrX	152914441	152973480	chrX:152914441-152973480	1	+	152914489	152970541	789624	23	82,124,66,39,78,90,99,84,39,84,90,105,99,96,90,198,198,111,81,72,103,99,2207,	0,268,696,2689,2843,3623,4541,5886,6268,7731,8278,17230,18431,21976,23632,30825,45257,49397,51005,52725,54940,56001,56832,
#Partially deleted in new
chrX	152914452	152973471	chrX:152914452-152973471	3	+	152914489	152970541	789624	23	71,124,66,39,78,90,99,84,39,84,90,87,105,99,90,198,198,111,81,72,103,99,2198,	0,257,685,2678,2832,3612,4530,5875,6257,7720,8267,14122,17219,18420,23621,30814,45246,49386,50994,52714,54929,55990,56821,
#Partially deleted in new
chrX	152914489	152970541	chrX:152914489-152970541	1	+	152914489	152970541	789624	23	34,124,66,39,78,90,99,84,39,84,90,87,105,99,96,90,198,198,111,81,72,103,99,	0,220,648,2641,2795,3575,4493,5838,6220,7683,8230,14085,17182,18383,21928,23584,30777,45209,49349,50957,52677,54892,55953,
#Partially deleted in new
chrX	152914489	152970541	chrX:152914489-152970541	0	+	152914489	152963843	789624	22	34,124,66,39,78,90,99,84,39,84,90,105,99,96,90,198,239,111,81,72,103,99,	0,220,648,2641,2795,3575,4493,5838,6220,7683,8230,17182,18383,21928,23584,30777,45209,49349,50957,52677,54892,55953,
#Partially deleted in new
chrX	152917864	152973480	chrX:152917864-152973480	1	+	152918128	152970541	789624	15	290,99,42,84,105,99,90,198,198,111,81,72,103,99,2207,	0,1118,2842,4308,13807,15008,20209,27402,41834,45974,47582,49302,51517,52578,53409,
#Partially deleted in new
chrX	152918120	152973471	chrX:152918120-152973471	1	+	152918160	152970541	789624	15	51,99,84,42,84,87,90,198,198,111,81,72,103,99,2198,	0,862,2207,2586,4052,10454,19953,27146,41578,45718,47326,49046,51261,52322,53153,
#Partially deleted in new
chrX	152920348	152973473	chrX:152920348-152973473	0	+	152920348	152970541	789624	14	63,42,84,105,99,90,198,198,111,81,72,103,99,2200,	0,358,1824,11323,12524,17725,24918,39350,43490,45098,46818,49033,50094,50925,
#Partially deleted in new
chrX	152920706	152959841	chrX:152920706-152959841	0	+	152920706	152959841	789624	6	42,84,90,105,90,143,	0,1466,2013,10965,17367,38992,
#Partially deleted in new
chrX	152941700	152973472	chrX:152941700-152973472	1	+	152941708	152970541	789624	9	130,198,198,111,81,72,103,99,2199,	0,3566,17998,22138,23746,25466,27681,28742,29573,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	152988823	152992214	chrX:152988823-152992214	1	-	152990251	152991598	789624	2	2898,299,	0,3092,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	152988824	152992217	chrX:152988824-152992217	1	-	152990251	152991598	789624	2	2897,316,	0,3077,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	152988824	152992217	chrX:152988824-152992217	1	-	152990251	152991598	789624	3	2897,76,140,	0,3077,3253,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	152988824	152994127	chrX:152988824-152994127	3	-	152990251	152991598	789624	4	2897,76,130,95,	0,3077,3832,5208,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	152991178	152992786	chrX:152991178-152992786	0	-	152991178	152991598	789624	3	543,76,130,	0,723,1478,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	153028784	153030148	chrX:153028784-153030148	7	+	153028784	153028784	16724991	1	1364,	0,
#Deleted in new
chrX	153052149	153052413	chrX:153052149-153052413	7	-	153052149	153052149	16724991	1	264,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	153056408	153060467	chrX:153056408-153060467	1	+	153057055	153058544	789624	3	230,1411,1986,	0,541,2073,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	153056481	153060462	chrX:153056481-153060462	0	+	153057055	153058447	789624	3	157,1822,1179,	0,468,2802,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	153057035	153058467	chrX:153057035-153058467	3	+	153057055	153058447	789624	1	1432,	0,
#Deleted in new
chrX	153072481	153075018	chrX:153072481-153075018	3	+	153073062	153074262	789624	2	125,2084,	0,453,
#Deleted in new
chrX	153075768	153076968	chrX:153075768-153076968	7	-	153075768	153075768	16724991	1	1200,	0,
#Deleted in new
chrX	153122144	153128323	chrX:153122144-153128323	7	-	153122144	153122144	16724991	2	1463,543,	0,5636,
#Deleted in new
chrX	153179284	153183880	chrX:153179284-153183880	3	+	153182389	153183319	0	3	81,73,1556,	0,2892,3040,
#Deleted in new
chrX	153203043	153205534	chrX:153203043-153205534	7	+	153203043	153203043	16724991	3	111,100,99,	0,973,2392,
#Partially deleted in new
chrX	153225648	153229714	chrX:153225648-153229714	0	+	153225648	153225648	8553170	4	153,104,110,176,	0,282,1332,3890,
#Partially deleted in new
chrX	153225658	153230357	chrX:153225658-153230357	3	+	153225658	153225658	8553170	4	143,150,110,819,	0,226,1322,3880,
#Deleted in new
chrX	153249114	153249691	chrX:153249114-153249691	7	-	153249114	153249114	16724991	2	188,11,	0,566,
#Deleted in new
chrX	153276840	153277803	chrX:153276840-153277803	7	+	153276840	153276840	16724991	1	963,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	153317680	153321822	chrX:153317680-153321822	3	-	153318937	153320674	789624	2	3077,271,	0,3871,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	153334146	153352882	chrX:153334146-153352882	3	+	153346844	153347975	789624	3	139,102,6064,	0,11373,12672,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	153334154	153352926	chrX:153334154-153352926	1	+	153336679	153347773	789624	5	131,77,102,837,5173,	0,2479,11365,12664,13599,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	153334154	153352926	chrX:153334154-153352926	1	+	153336679	153347975	8553170	4	131,77,102,6108,	0,2479,11365,12664,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	153344276	153351393	chrX:153344276-153351393	0	+	153344276	153344276	8553170	2	1345,4575,	0,2542,
#Deleted in new
chrX	153355732	153355956	chrX:153355732-153355956	7	+	153355732	153355732	16724991	1	224,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	153395639	153401392	chrX:153395639-153401392	1	-	153396905	153398849	789624	3	2233,214,149,	0,3067,5604,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	153396905	153401420	chrX:153396905-153401420	3	-	153396905	153398849	789624	2	2015,177,	0,4338,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	153403843	153404141	chrX:153403843-153404141	3	-	153403843	153403843	8553170	1	298,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	153418321	153426481	chrX:153418321-153426481	3	+	153418322	153421628	789624	4	34,127,105,5839,	0,351,1906,2321,
#Partially deleted in new
chrX	153444719	153470587	chrX:153444719-153470587	1	-	153444719	153445430	0	13	745,103,162,115,177,225,100,159,92,62,68,116,138,	0,1289,3028,9674,10157,10822,11545,11773,12417,17890,20268,24426,25730,
#Partially deleted in new
chrX	153444719	153470587	chrX:153444719-153470587	1	-	153444719	153447842	0	11	745,162,115,225,100,159,92,62,68,116,138,	0,3028,9674,10822,11545,11773,12417,17890,20268,24426,25730,
#Partially deleted in new
chrX	153444719	153470587	chrX:153444719-153470587	3	-	153444719	153445430	0	12	776,103,162,115,225,100,159,92,62,68,116,138,	0,1289,3028,9674,10822,11545,11773,12417,17890,20268,24426,25730,
#Deleted in new
chrX	153444719	153447863	chrX:153444719-153447863	1	-	153444719	153447842	0	2	745,116,	0,3028,
#Deleted in new
chrX	153444719	153446487	chrX:153444719-153446487	1	-	153444719	153445430	0	2	776,479,	0,1289,
#Partially deleted in new
chrX	153444719	153470587	chrX:153444719-153470587	1	-	153444719	153447842	0	11	745,162,115,107,100,159,92,62,68,116,138,	0,3028,9674,10822,11545,11773,12417,17890,20268,24426,25730,
#Deleted in new
chrX	153444719	153447863	chrX:153444719-153447863	1	-	153444719	153445430	0	3	745,46,116,	0,879,3028,
#Partially deleted in new
chrX	153447665	153470631	chrX:153447665-153470631	3	-	153447877	153470587	789624	10	244,115,225,100,159,92,62,68,116,182,	0,6728,7876,8599,8827,9471,14944,17322,21480,22784,
#Partially deleted in new
chrX	153447669	153456350	chrX:153447669-153456350	0	-	153447877	153456350	789624	5	240,115,177,225,86,	0,6724,7207,7872,8595,
#Partially deleted in new
chrX	153447669	153456293	chrX:153447669-153456293	0	-	153447669	153447669	8553170	4	240,115,107,29,	0,6724,7872,8595,
#Partially deleted in new
chrX	153447669	153457191	chrX:153447669-153457191	0	-	153447669	153447669	8553170	5	240,1373,100,159,55,	0,6724,8595,8823,9467,
#Partially deleted in new
chrX	153447748	153455143	chrX:153447748-153455143	0	-	153447748	153447748	8553170	3	161,115,267,	0,6645,7128,
#Partially deleted in new
chrX	153447860	153457162	chrX:153447860-153457162	0	-	153447860	153447860	8553170	7	49,115,177,225,100,159,26,	0,6533,7016,7681,8404,8632,9276,
#Partially deleted in new
chrX	153455464	153470553	chrX:153455464-153470553	0	-	153455464	153455464	8553170	7	184,100,159,92,62,116,104,	0,800,1028,1672,7145,13681,14985,
#Partially deleted in new
chrX	153456492	153470565	chrX:153456492-153470565	0	-	153456492	153456492	8553170	6	132,92,62,68,116,116,	0,644,6117,8495,12653,13957,
#Partially deleted in new
chrX	153456729	153470555	chrX:153456729-153470555	0	-	153456729	153456729	8553170	5	499,62,68,116,106,	0,5880,8258,12416,13720,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	153461559	153495516	chrX:153461559-153495516	1	-	153462037	153470557	789624	6	508,62,68,116,696,143,	0,1050,3428,7586,8890,33814,
#Partially deleted in new
chrX	153479265	153486810	chrX:153479265-153486810	7	+	153479265	153479265	16724991	9	121,426,288,116,133,157,140,327,181,	0,1314,2095,2544,3061,3450,4039,6504,7364,
#Deleted in new
chrX	153485855	153487088	chrX:153485855-153487088	5	+	153485855	153485855	16724991	2	241,459,	0,774,
#Deleted in new
chrX	153494938	153509554	chrX:153494938-153509554	3	+	153504631	153508445	789624	8	175,249,113,214,111,94,139,1307,	0,9682,10299,10924,11590,11891,12108,13309,
#Deleted in new
chrX	153494980	153509546	chrX:153494980-153509546	0	+	153494980	153494980	8553170	8	133,249,52,148,111,94,139,1299,	0,9640,10257,10948,11548,11849,12066,13267,
#Deleted in new
chrX	153494982	153509546	chrX:153494982-153509546	0	+	153494982	153494982	8553170	8	131,198,92,214,111,94,139,1299,	0,9638,10276,10880,11546,11847,12064,13265,
#Deleted in new
chrX	153494992	153506626	chrX:153494992-153506626	0	+	153504631	153506626	789624	5	121,249,164,214,98,	0,9628,10245,10870,11536,
#Deleted in new
chrX	153505868	153508805	chrX:153505868-153508805	0	+	153505868	153505868	8553170	3	208,86,126,	0,660,2811,
#Partially deleted in new
chrX	153517675	153580589	chrX:153517675-153580589	1	+	153536247	153580298	789624	21	200,334,198,258,126,126,42,165,215,243,242,235,180,88,107,192,214,212,108,183,612,	0,18446,23683,23993,24647,25367,28412,30159,30964,31821,32369,35359,38373,38655,39241,40436,42053,43000,44459,47245,62302,
#Partially deleted in new
chrX	153517675	153582939	chrX:153517675-153582939	1	+	153536247	153580003	789624	21	200,334,198,258,126,126,165,215,243,242,235,180,88,107,192,214,212,108,183,154,2962,	0,18446,23683,23993,24647,25367,30159,30964,31821,32369,35359,38373,38655,39241,40436,42053,43000,44459,47245,51927,62302,
#Partially deleted in new
chrX	153532933	153569962	chrX:153532933-153569962	1	+	153536247	153569767	789624	20	278,334,198,258,126,126,165,215,243,242,235,180,88,107,192,214,212,108,183,360,	0,3188,8425,8735,9389,10109,14901,15706,16563,17111,20101,23115,23397,23983,25178,26795,27742,29201,31987,36669,
#Partially deleted in new
chrX	153536121	153582929	chrX:153536121-153582929	1	+	153536247	153580298	789624	20	334,198,258,126,126,42,165,215,243,242,235,180,88,107,192,214,212,108,183,2952,	0,5237,5547,6201,6921,9966,11713,12518,13375,13923,16913,19927,20209,20795,21990,23607,24554,26013,28799,43856,
#Partially deleted in new
chrX	153536121	153580589	chrX:153536121-153580589	3	+	153536247	153580003	789624	21	334,198,258,126,126,42,165,215,243,242,235,180,88,107,192,214,212,108,183,154,612,	0,5237,5547,6201,6921,9966,11713,12518,13375,13923,16913,19927,20209,20795,21990,23607,24554,26013,28799,33481,43856,
#Deleted in new
chrX	153556945	153560824	chrX:153556945-153560824	0	+	153556945	153556945	8553170	5	78,192,266,214,149,	0,1166,2311,2783,3730,
#Partially deleted in new
chrX	153569647	153580569	chrX:153569647-153580569	0	+	153569647	153569647	8553170	2	42,592,	0,10330,
#Partially deleted in new
chrX	153587918	153599186	chrX:153587918-153599186	1	-	153588364	153599073	789624	5	536,228,133,184,225,	0,4587,6628,8085,11043,
#Partially deleted in new
chrX	153587926	153599031	chrX:153587926-153599031	0	-	153592693	153599031	789624	4	528,228,184,66,	0,4579,8077,11039,
#Partially deleted in new
chrX	153587931	153599117	chrX:153587931-153599117	3	-	153588364	153599073	789624	5	463,228,133,184,156,	0,4574,6615,8072,11030,
#Partially deleted in new
chrX	153587931	153599117	chrX:153587931-153599117	0	-	153596175	153599073	789624	5	463,228,133,184,152,	0,4574,6615,8072,11034,
#Partially deleted in new
chrX	153587931	153599117	chrX:153587931-153599117	0	-	153596175	153599073	789624	5	523,228,133,184,152,	0,4574,6615,8072,11034,
#Partially deleted in new
chrX	153588054	153596063	chrX:153588054-153596063	0	-	153588364	153596063	789624	3	400,133,60,	0,6492,7949,
#Partially deleted in new
chrX	153588162	153599054	chrX:153588162-153599054	0	-	153588162	153599054	789624	3	232,184,93,	0,7841,10799,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	153592574	153599116	chrX:153592574-153599116	0	-	153597698	153599073	789624	5	159,133,184,285,155,	0,1972,3429,4847,6387,
#Partially deleted in new
chrX	153592611	153600045	chrX:153592611-153600045	0	-	153592611	153596173	789624	4	122,133,184,139,	0,1935,3392,7295,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	153599314	153609261	chrX:153599314-153609261	5	+	153599314	153599314	16724991	2	584,2023,	0,7924,
#Deleted in new
chrX	153599339	153599893	chrX:153599339-153599893	4	+	153599339	153599339	16724991	1	554,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	153599362	153607986	chrX:153599362-153607986	4	+	153599362	153599362	16724991	2	536,1490,	0,7134,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	153599371	153604353	chrX:153599371-153604353	4	+	153599371	153599371	16724991	2	527,228,	0,4754,
#Partially deleted in new
chrX	153599442	153613937	chrX:153599442-153613937	7	+	153599442	153599442	16724991	2	456,1327,	0,13168,
#Deleted in new
chrX	153604496	153605348	chrX:153604496-153605348	7	-	153604496	153604496	16724991	1	852,	0,
#Deleted in new
chrX	153606516	153607101	chrX:153606516-153607101	5	+	153606516	153606516	16724991	1	585,	0,
#Partially deleted in new
chrX	153610693	153612925	chrX:153610693-153612925	4	+	153610693	153610693	16724991	2	302,315,	0,1917,
#Deleted in new
chrX	153642491	153648013	chrX:153642491-153648013	0	+	153642491	153642491	8553170	3	120,215,95,	0,4960,5427,
#Partially deleted in new
chrX	153642533	153651326	chrX:153642533-153651326	3	+	153647953	153650305	0	4	78,408,456,1347,	0,5385,6698,7446,
#Partially deleted in new
chrX	153647195	153651318	chrX:153647195-153651318	1	+	153647953	153650305	0	4	230,408,456,1339,	0,723,2036,2784,
#Deleted in new
chrX	153662161	153662692	chrX:153662161-153662692	7	+	153662161	153662161	16724991	1	531,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	153666225	153666510	chrX:153666225-153666510	3	+	153666225	153666225	8553170	1	285,	0,
#Deleted in new
chrX	153669729	153673845	chrX:153669729-153673845	3	-	153670456	153673076	789624	12	401,145,88,79,113,76,124,139,75,132,70,66,	0,720,1014,1188,1348,1555,1819,2150,2396,2836,3279,4050,
#Deleted in new
chrX	153669732	153673693	chrX:153669732-153673693	1	-	153670456	153673076	789624	12	394,145,88,79,113,76,124,139,75,132,70,177,	0,717,1011,1185,1345,1552,1816,2147,2393,2833,3276,3784,
#Deleted in new
chrX	153669732	153673946	chrX:153669732-153673946	0	-	153669732	153669732	8553170	11	398,145,88,79,113,76,124,321,132,70,18,	0,717,1011,1185,1345,1552,1816,2147,2833,3276,4196,
#Deleted in new
chrX	153669734	153670831	chrX:153669734-153670831	0	-	153669816	153670831	789624	3	132,106,88,	0,754,1009,
#Deleted in new
chrX	153669734	153673802	chrX:153669734-153673802	0	-	153669734	153669734	8553170	8	396,145,88,79,1123,219,70,23,	0,715,1009,1183,1343,2831,3274,4045,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	153669767	153674325	chrX:153669767-153674325	1	-	153670456	153673076	789624	12	363,145,88,79,113,149,120,139,75,132,70,52,	0,682,976,1150,1310,1517,1785,2112,2358,2798,3241,4506,
#Deleted in new
chrX	153669783	153673288	chrX:153669783-153673288	1	-	153670456	153673270	789624	12	347,145,88,79,113,76,124,139,75,132,70,67,	0,666,960,1134,1294,1501,1765,2096,2342,2782,3225,3438,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	153670019	153674361	chrX:153670019-153674361	1	-	153670456	153674175	789624	12	111,145,88,79,113,76,124,139,75,132,70,433,	0,430,724,898,1058,1265,1529,1860,2106,2546,2989,3909,
#Partially deleted in new
chrX	153670529	153686788	chrX:153670529-153686788	0	-	153670529	153670529	8553170	10	65,88,79,113,388,139,75,132,70,288,	0,214,388,548,755,1350,1596,2036,2479,15971,
#Deleted in new
chrX	153670955	153673076	chrX:153670955-153673076	0	-	153670955	153670955	8553170	3	41,1123,68,	0,122,2053,
#Deleted in new
chrX	153671126	153673373	chrX:153671126-153673373	0	-	153671126	153673076	789624	8	64,76,124,139,75,132,70,74,	0,158,422,753,999,1439,1882,2173,
#Deleted in new
chrX	153671129	153673799	chrX:153671129-153673799	0	-	153672013	153673076	789624	8	61,76,124,139,95,132,70,20,	0,155,419,750,996,1436,1879,2650,
#Deleted in new
chrX	153671131	153673174	chrX:153671131-153673174	0	-	153671131	153673076	789624	7	59,76,124,139,75,132,166,	0,153,417,748,994,1434,1877,
#Deleted in new
chrX	153671238	153673822	chrX:153671238-153673822	0	-	153671238	153671238	8553170	5	434,139,75,513,43,	0,641,887,1327,2541,
#Deleted in new
chrX	153671307	153673834	chrX:153671307-153673834	0	-	153671307	153671307	8553170	6	365,139,75,132,70,55,	0,572,818,1258,1701,2472,
#Deleted in new
chrX	153671356	153673823	chrX:153671356-153673823	0	-	153672013	153673076	789624	7	4,124,139,75,101,70,44,	0,192,523,769,1209,1652,2423,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	153671498	153674345	chrX:153671498-153674345	0	-	153671498	153671498	8553170	4	702,132,70,72,	0,1067,1510,2775,
#Deleted in new
chrX	153671551	153673749	chrX:153671551-153673749	0	-	153671551	153671551	8553170	5	121,321,132,70,233,	0,328,1014,1457,1965,
#Deleted in new
chrX	153671559	153673804	chrX:153671559-153673804	0	-	153671559	153671559	8553170	4	641,132,70,25,	0,1006,1449,2220,
#Deleted in new
chrX	153671689	153673381	chrX:153671689-153673381	0	-	153671689	153671689	8553170	4	511,132,70,70,	0,876,1319,1622,
#Partially deleted in new
chrX	153671979	153687568	chrX:153671979-153687568	0	-	153672637	153673076	789624	4	221,132,70,138,	0,586,1029,15451,
#Partially deleted in new
chrX	153672100	153689010	chrX:153672100-153689010	0	-	153672637	153673076	789624	4	100,132,70,196,	0,465,908,16714,
#Deleted in new
chrX	153672121	153672950	chrX:153672121-153672950	0	-	153672121	153672121	8553170	2	79,385,	0,444,
#Partially deleted in new
chrX	153672136	153674911	chrX:153672136-153674911	0	-	153672136	153673076	789624	4	84,132,70,280,	0,429,872,2495,
#Deleted in new
chrX	153672141	153673361	chrX:153672141-153673361	0	-	153672141	153673076	789624	4	59,132,70,50,	0,424,867,1170,
#Partially deleted in new
chrX	153672172	153687562	chrX:153672172-153687562	0	-	153672637	153673076	789624	5	28,132,70,166,329,	0,393,836,14328,15061,
#Partially deleted in new
chrX	153672637	153687565	chrX:153672637-153687565	0	-	153672637	153673076	789624	4	60,70,183,135,	0,371,13863,14793,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	153672946	153674500	chrX:153672946-153674500	0	-	153672946	153672946	8553170	2	132,572,	0,982,
#Partially deleted in new
chrX	153674666	153686792	chrX:153674666-153686792	0	-	153674666	153674666	8553170	4	188,39,67,292,	0,388,512,11834,
#Deleted in new
chrX	153686455	153687759	chrX:153686455-153687759	0	-	153686455	153686455	8553170	2	228,510,	0,794,
#Deleted in new
chrX	153686463	153688878	chrX:153686463-153688878	0	-	153686463	153686463	8553170	4	220,125,213,64,	0,382,871,2351,
#Deleted in new
chrX	153686624	153687795	chrX:153686624-153687795	0	-	153686624	153686624	8553170	2	59,461,	0,710,
#Deleted in new
chrX	153688098	153696593	chrX:153688098-153696593	3	+	153688574	153695214	789624	13	738,132,250,133,135,104,125,113,138,103,101,171,1520,	0,2276,3205,3876,4942,5164,5363,5806,6031,6245,6434,6620,6975,
#Deleted in new
chrX	153688722	153690881	chrX:153688722-153690881	0	+	153688722	153688722	8553170	3	114,278,78,	0,1652,2081,
#Deleted in new
chrX	153689466	153695327	chrX:153689466-153695327	1	+	153690457	153695214	789624	13	133,132,250,133,135,104,125,113,138,103,101,171,254,	0,908,1837,2508,3574,3796,3995,4438,4663,4877,5066,5252,5607,
#Deleted in new
chrX	153691117	153692082	chrX:153691117-153692082	0	+	153691117	153691117	8553170	2	436,108,	0,857,
#Deleted in new
chrX	153691362	153693972	chrX:153691362-153693972	0	+	153691362	153691362	8553170	3	145,95,68,	0,2129,2542,
#Deleted in new
chrX	153691460	153692215	chrX:153691460-153692215	0	+	153691460	153692215	789624	2	93,241,	0,514,
#Deleted in new
chrX	153692230	153695400	chrX:153692230-153695400	0	+	153692230	153692230	8553170	6	945,104,125,729,171,327,	0,1032,1231,1674,2488,2843,
#Deleted in new
chrX	153693053	153694576	chrX:153693053-153694576	0	+	153693053	153694576	789624	6	122,40,95,64,103,44,	0,273,438,1150,1290,1479,
#Deleted in new
chrX	153693266	153694420	chrX:153693266-153694420	0	+	153693266	153694420	789624	5	100,95,113,138,77,	0,225,638,863,1077,
#Deleted in new
chrX	153693461	153694164	chrX:153693461-153694164	0	+	153693461	153694164	789624	3	125,113,28,	0,443,675,
#Partially deleted in new
chrX	153700491	153724746	chrX:153700491-153724746	3	-	153700936	153723244	0	8	484,101,124,136,148,101,136,413,	0,1515,2443,3467,15050,20380,22661,23842,
#Partially deleted in new
chrX	153700491	153724101	chrX:153700491-153724101	1	-	153700936	153723664	0	8	484,101,124,136,148,101,136,594,	0,1515,2443,3467,15050,20380,22661,23016,
#Partially deleted in new
chrX	153700495	153724435	chrX:153700495-153724435	1	-	153700936	153723244	0	9	480,101,124,136,148,101,136,105,102,	0,1511,2439,3463,15046,20376,22657,23012,23838,
#Partially deleted in new
chrX	153700496	153724388	chrX:153700496-153724388	1	-	153700936	153723244	789624	8	479,101,19,136,148,101,136,55,	0,1510,2543,3462,15045,20375,22656,23837,
#Deleted in new
chrX	153700502	153705456	chrX:153700502-153705456	0	-	153700502	153700502	8553170	6	473,101,124,136,281,102,	0,1504,2432,3456,4318,4852,
#Deleted in new
chrX	153700530	153702454	chrX:153700530-153702454	0	-	153700530	153700530	8553170	2	445,448,	0,1476,
#Partially deleted in new
chrX	153702969	153724383	chrX:153702969-153724383	0	-	153702969	153723244	789624	6	89,136,148,101,136,183,	0,989,12572,17902,20183,21231,
#Partially deleted in new
chrX	153702974	153724565	chrX:153702974-153724565	0	-	153702974	153723244	789624	6	84,136,148,101,136,79,	0,984,12567,17897,20178,21512,
#Partially deleted in new
chrX	153702989	153724113	chrX:153702989-153724113	0	-	153702989	153723244	789624	6	69,136,148,101,136,98,	0,969,12552,17882,20163,21026,
#Partially deleted in new
chrX	153703000	153724044	chrX:153703000-153724044	0	-	153703000	153723244	789624	6	58,136,148,101,136,90,	0,958,12541,17871,20152,20954,
#Partially deleted in new
chrX	153704020	153723399	chrX:153704020-153723399	0	-	153704020	153723244	789624	4	74,148,101,247,	0,11521,16851,19132,
#Partially deleted in new
chrX	153715416	153724396	chrX:153715416-153724396	0	-	153715416	153715416	8553170	4	273,101,136,63,	0,5455,7736,8917,
#Partially deleted in new
chrX	153715566	153721157	chrX:153715566-153721157	0	-	153715566	153715566	8553170	2	123,286,	0,5305,
#Partially deleted in new
chrX	153724867	153744762	chrX:153724867-153744762	3	+	153725266	153743735	789624	10	1299,181,143,169,95,146,146,85,126,1274,	0,4364,11244,11477,12289,15224,15706,18119,18353,18621,
#Partially deleted in new
chrX	153725816	153729897	chrX:153725816-153729897	1	+	153725821	153729570	789624	2	350,666,	0,3415,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	153735343	153740604	chrX:153735343-153740604	0	+	153735343	153735343	8553170	6	84,143,169,95,146,31,	0,768,1001,1813,4748,5230,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	153735625	153766453	chrX:153735625-153766453	3	-	153735625	153735625	8553170	3	334,509,71,	0,2444,30757,
#Boundary problem: need 37, got 0, diff 37, mapped 0.0
chrX	153764195	153779346	chrX:153764195-153779346	1	+	153766210	153779039	789624	37	109,110,166,1041,180,129,101,133,157,109,115,126,117,94,170,152,106,131,177,196,240,159,152,101,224,179,67,328,104,94,173,161,148,65,76,75,412,	0,1275,1963,2677,4053,4752,4966,5611,5896,6142,6332,6562,6769,7114,7290,7668,7986,8690,9034,9322,9663,9990,10224,10510,10684,11029,11398,11691,12160,12691,13012,13332,13752,14065,14200,14404,14739,
#Boundary problem: need 36, got 0, diff 36, mapped 0.0
chrX	153764255	153779341	chrX:153764255-153779341	3	+	153765535	153779039	789624	36	49,110,1041,180,129,101,133,157,109,115,126,117,94,170,152,106,131,177,196,240,159,152,101,224,179,67,328,104,94,173,161,148,65,76,75,407,	0,1215,2617,3993,4692,4906,5551,5836,6082,6272,6502,6709,7054,7230,7608,7926,8630,8974,9262,9603,9930,10164,10450,10624,10969,11338,11631,12100,12631,12952,13272,13692,14005,14140,14344,14679,
#Deleted in new
chrX	153774758	153776956	chrX:153774758-153776956	0	+	153774758	153776956	789624	7	48,224,179,67,82,104,70,	0,121,466,835,1128,1597,2128,
#Deleted in new
chrX	153774928	153776399	chrX:153774928-153776399	0	+	153774928	153774928	8553170	5	175,103,67,328,44,	0,372,665,958,1427,
#Deleted in new
chrX	153775975	153777032	chrX:153775975-153777032	0	+	153775975	153777032	789624	3	239,104,146,	0,380,911,
#Boundary problem: need 21, got 0, diff 21, mapped 0.0
chrX	153776411	153785728	chrX:153776411-153785728	1	+	153780225	153785520	789624	21	48,94,173,161,524,75,1551,131,109,88,88,107,166,26,133,240,101,108,70,93,393,	0,475,796,1116,1536,2188,2523,4804,5093,5331,5709,6360,6541,6814,7340,7562,7882,8338,8522,8669,8924,
#Deleted in new
chrX	153777241	153778326	chrX:153777241-153778326	0	+	153777241	153777241	8553170	3	139,568,66,	0,286,1019,
#Deleted in new
chrX	153777516	153778301	chrX:153777516-153778301	0	+	153777516	153778301	789624	2	172,354,	0,431,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	153778190	153779340	chrX:153778190-153779340	0	+	153778190	153778190	8553170	4	135,76,75,340,	0,205,409,810,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	153778381	153779340	chrX:153778381-153779340	0	+	153778381	153778381	8553170	2	293,406,	0,553,
#Deleted in new
chrX	153781000	153785732	chrX:153781000-153785732	1	+	153781086	153785520	789624	16	145,131,109,88,88,107,166,26,130,48,93,101,108,70,93,397,	0,215,504,742,1120,1771,1952,2225,2754,2973,3120,3293,3749,3933,4080,4335,
#Deleted in new
chrX	153781038	153785524	chrX:153781038-153785524	1	+	153781086	153785520	789624	15	107,131,109,88,88,107,166,26,130,240,101,108,70,93,189,	0,177,466,704,1082,1733,1914,2187,2716,2935,3255,3711,3895,4042,4297,
#Deleted in new
chrX	153781038	153785730	chrX:153781038-153785730	1	+	153781086	153785520	789624	16	107,131,109,88,88,107,166,26,130,51,93,101,108,70,93,395,	0,177,466,704,1082,1733,1914,2187,2716,2935,3082,3255,3711,3895,4042,4297,
#Deleted in new
chrX	153781040	153785728	chrX:153781040-153785728	3	+	153781086	153785520	789624	15	105,131,109,88,88,107,166,26,133,240,101,108,70,93,393,	0,175,464,702,1080,1731,1912,2185,2711,2933,3253,3709,3893,4040,4295,
#Deleted in new
chrX	153781115	153785728	chrX:153781115-153785728	1	+	153781282	153785520	789624	16	30,64,109,88,88,107,166,26,130,51,93,101,108,70,93,393,	0,167,389,627,1005,1656,1837,2110,2639,2858,3005,3178,3634,3818,3965,4220,
#Deleted in new
chrX	153781115	153782869	chrX:153781115-153782869	0	+	153781115	153782869	789624	5	231,109,88,88,98,	0,389,627,1005,1656,
#Deleted in new
chrX	153784703	153785404	chrX:153784703-153785404	0	+	153784703	153785404	789624	4	154,70,93,69,	0,230,377,632,
#Partially deleted in new
chrX	153785765	153794523	chrX:153785765-153794523	3	-	153785871	153794326	0	13	208,61,95,147,103,134,133,61,113,98,12,42,278,	0,446,589,1035,1285,1698,2057,2309,3946,4429,4798,5044,8480,
#Partially deleted in new
chrX	153785765	153794512	chrX:153785765-153794512	1	-	153786148	153794326	0	12	507,95,147,103,134,133,61,113,98,12,42,267,	0,589,1035,1285,1698,2057,2309,3946,4429,4798,5044,8480,
#Partially deleted in new
chrX	153785766	153794381	chrX:153785766-153794381	1	-	153786350	153794326	789624	11	683,147,103,134,133,61,113,98,12,42,136,	0,1034,1284,1697,2056,2308,3945,4428,4797,5043,8479,
#Deleted in new
chrX	153785766	153787553	chrX:153785766-153787553	0	-	153785871	153787553	789624	6	243,61,95,147,103,90,	0,445,588,1034,1284,1697,
#Partially deleted in new
chrX	153785797	153794356	chrX:153785797-153794356	1	-	153786148	153790253	789624	11	475,95,147,103,134,133,61,113,98,56,111,	0,557,1003,1253,1666,2025,2277,3914,4397,4998,8448,
#Partially deleted in new
chrX	153786148	153794523	chrX:153786148-153794523	1	-	153786148	153790253	789624	11	124,95,147,103,134,133,61,113,105,46,278,	0,206,652,902,1315,1674,1926,3563,4046,4657,8097,
#Partially deleted in new
chrX	153786800	153794359	chrX:153786800-153794359	0	-	153786800	153794326	789624	10	147,103,134,133,61,113,98,12,42,45,	0,250,663,1022,1274,2911,3394,3763,4009,7514,
#Partially deleted in new
chrX	153787050	153789790	chrX:153787050-153789790	0	-	153787050	153789790	789624	6	103,134,133,61,87,79,	0,413,772,1024,2063,2661,
#Partially deleted in new
chrX	153787126	153794356	chrX:153787126-153794356	0	-	153787126	153787126	8553170	9	27,134,133,61,113,98,12,162,111,	0,337,696,948,2585,3068,3437,3683,7119,
#Partially deleted in new
chrX	153787390	153794335	chrX:153787390-153794335	0	-	153787390	153787390	8553170	8	207,133,61,113,98,12,42,90,	0,432,684,2321,2804,3173,3419,6855,
#Partially deleted in new
chrX	153787825	153794346	chrX:153787825-153794346	0	-	153787825	153787825	8553170	7	130,61,113,98,118,136,101,	0,249,1886,2369,3365,4421,6420,
#Deleted in new
chrX	153789837	153794325	chrX:153789837-153794325	0	-	153789837	153789837	8553170	4	455,12,42,80,	0,726,972,4408,
#Partially deleted in new
chrX	153793515	153798498	chrX:153793515-153798498	3	+	153794687	153798433	789624	7	1070,81,119,75,90,66,170,	0,1158,2918,3942,4209,4555,4813,
#Deleted in new
chrX	153794174	153796342	chrX:153794174-153796342	0	+	153794174	153794174	8553170	3	160,81,680,	0,499,1488,
#Partially deleted in new
chrX	153794190	153798498	chrX:153794190-153798498	1	+	153794687	153798433	789624	7	144,81,119,75,90,66,170,	0,483,2243,3267,3534,3880,4138,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	153794448	153798493	chrX:153794448-153798493	0	+	153794448	153794448	789624	6	137,81,1870,90,66,165,	0,225,1214,3276,3622,3880,
#Partially deleted in new
chrX	153794638	153798505	chrX:153794638-153798505	1	+	153794687	153798433	789624	6	116,119,75,90,66,177,	0,1795,2819,3086,3432,3690,
#Partially deleted in new
chrX	153794658	153798493	chrX:153794658-153798493	0	+	153794658	153794658	8553170	4	1894,75,90,423,	0,2799,3066,3412,
#Partially deleted in new
chrX	153794673	153798498	chrX:153794673-153798498	1	+	153794687	153798433	789624	5	81,119,90,66,170,	0,1760,3051,3397,3655,
#Partially deleted in new
chrX	153794675	153797503	chrX:153794675-153797503	0	+	153794675	153794675	8553170	4	79,199,119,46,	0,1252,1758,2782,
#Partially deleted in new
chrX	153794678	153798493	chrX:153794678-153798493	0	+	153794678	153794678	8553170	7	76,199,114,75,90,66,165,	0,984,1760,2779,3046,3392,3650,
#Partially deleted in new
chrX	153795047	153798497	chrX:153795047-153798497	0	+	153795047	153795047	8553170	6	139,119,75,90,66,169,	0,1386,2410,2677,3023,3281,
#Partially deleted in new
chrX	153796251	153798497	chrX:153796251-153798497	0	+	153796251	153796251	8553170	5	301,75,90,66,169,	0,1206,1473,1819,2077,
#Deleted in new
chrX	153797623	153798498	chrX:153797623-153798498	0	+	153797623	153797623	8553170	3	191,66,170,	0,447,705,
#Partially deleted in new
chrX	153802165	153830490	chrX:153802165-153830490	3	-	153803352	153830298	789624	8	2735,111,102,63,99,91,236,252,	0,2931,3339,3905,4576,5113,6194,28073,
#Partially deleted in new
chrX	153802167	153830548	chrX:153802167-153830548	1	-	153803352	153830298	789624	8	2733,111,102,63,99,91,254,310,	0,2929,3337,3903,4574,5111,6174,28071,
#Partially deleted in new
chrX	153802167	153830548	chrX:153802167-153830548	1	-	153803352	153830298	789624	6	2733,111,102,63,99,310,	0,2929,3337,3903,4574,28071,
#Deleted in new
chrX	153804878	153808139	chrX:153804878-153808139	0	-	153804878	153804878	8553170	7	22,111,102,63,99,91,289,	0,218,626,1192,1863,2400,2972,
#Partially deleted in new
chrX	153805092	153829856	chrX:153805092-153829856	0	-	153805092	153805092	8553170	7	115,102,63,99,91,236,124,	0,412,978,1649,2186,3267,24640,
#Partially deleted in new
chrX	153805544	153830143	chrX:153805544-153830143	0	-	153805544	153805544	8553170	7	62,63,99,91,243,254,17,	0,526,1197,1734,2352,2797,24582,
#Partially deleted in new
chrX	153805581	153830565	chrX:153805581-153830565	0	-	153805581	153805581	8553170	4	25,63,99,327,	0,489,1160,24657,
#Partially deleted in new
chrX	153806070	153830364	chrX:153806070-153830364	0	-	153808084	153830298	789624	6	63,99,91,243,254,126,	0,671,1208,1826,2271,24168,
#Partially deleted in new
chrX	153807326	153829670	chrX:153807326-153829670	0	-	153807326	153807326	8553170	4	43,243,254,125,	0,570,1015,22219,
#Deleted in new
chrX	153841250	153841565	chrX:153841250-153841565	7	+	153841250	153841250	16724991	1	315,	0,
#Partially deleted in new
chrX	153861513	153875944	chrX:153861513-153875944	1	-	153862662	153875836	789624	26	1381,73,135,156,120,174,123,202,116,223,71,198,111,125,157,167,112,144,132,185,112,171,123,203,106,184,	0,1963,2369,2808,3071,3307,3574,3785,4190,5135,5540,5842,6286,6484,6788,7047,7327,8006,8289,8542,8874,9276,9543,10638,11078,14247,
#Partially deleted in new
chrX	153861513	153886174	chrX:153861513-153886174	3	-	153862662	153875836	789624	29	1381,12,73,135,156,120,174,123,202,116,223,71,198,111,125,157,167,112,144,132,185,112,171,123,203,106,15,184,110,	0,1854,1963,2369,2808,3071,3307,3574,3785,4190,5135,5540,5842,6286,6484,6788,7047,7327,8006,8289,8542,8874,9276,9543,10638,11078,11714,14247,24551,
#Partially deleted in new
chrX	153861952	153886154	chrX:153861952-153886154	1	-	153862662	153875836	789624	27	942,73,135,156,120,174,123,202,116,223,71,198,111,125,157,167,112,144,132,185,112,171,123,203,106,184,90,	0,1524,1930,2369,2632,2868,3135,3346,3751,4696,5101,5403,5847,6045,6349,6608,6888,7567,7850,8103,8435,8837,9104,10199,10639,13808,24112,
#Deleted in new
chrX	153862432	153864478	chrX:153862432-153864478	0	-	153862662	153864478	789624	3	462,73,157,	0,1044,1889,
#Partially deleted in new
chrX	153862547	153875847	chrX:153862547-153875847	1	-	153862662	153875836	789624	27	347,73,135,156,120,174,123,202,116,223,71,198,111,125,157,167,112,144,132,185,112,171,123,203,106,15,87,	0,929,1335,1774,2037,2273,2540,2751,3156,4101,4506,4808,5252,5450,5754,6013,6293,6972,7255,7508,7840,8242,8509,9604,10044,10680,13213,
#Deleted in new
chrX	153862791	153863969	chrX:153862791-153863969	0	-	153862791	153862791	8553170	3	103,12,493,	0,576,685,
#Deleted in new
chrX	153864963	153865915	chrX:153864963-153865915	0	-	153864963	153864963	8553170	4	31,123,202,212,	0,124,335,740,
#Deleted in new
chrX	153866771	153868377	chrX:153866771-153868377	0	-	153866771	153868377	789624	5	100,71,198,125,76,	0,282,584,1226,1530,
#Deleted in new
chrX	153867550	153868623	chrX:153867550-153868623	0	-	153867550	153867550	8553170	4	3,111,125,322,	0,249,447,751,
#Deleted in new
chrX	153868406	153869172	chrX:153868406-153869172	0	-	153868406	153868406	8553170	3	52,167,332,	0,154,434,
#Deleted in new
chrX	153871127	153876039	chrX:153871127-153876039	0	-	153871127	153875836	789624	5	52,203,106,15,279,	0,1024,1464,2100,4633,
#Deleted in new
chrX	153872151	153876027	chrX:153872151-153876027	0	-	153872151	153875836	789624	3	203,106,267,	0,440,3609,
#Partially deleted in new
chrX	153872220	153909223	chrX:153872220-153909223	0	-	153872220	153872220	8553170	5	134,106,15,184,154,	0,371,1007,3540,36849,
#Partially deleted in new
chrX	153872258	153909166	chrX:153872258-153909166	0	-	153872694	153909166	789624	4	96,106,15,97,	0,333,969,36811,
#Partially deleted in new
chrX	153872258	153909166	chrX:153872258-153909166	3	-	153875878	153909166	789624	5	96,106,15,184,97,	0,333,969,3502,36811,
#Partially deleted in new
chrX	153872266	153886173	chrX:153872266-153886173	0	-	153872266	153875836	789624	5	88,106,184,82,109,	0,325,3494,8015,13798,
#Deleted in new
chrX	153872300	153876391	chrX:153872300-153876391	0	-	153872300	153875836	789624	5	54,106,15,184,278,	0,291,927,3460,3813,
#Partially deleted in new
chrX	153872948	153886142	chrX:153872948-153886142	0	-	153872948	153872948	8553170	3	294,184,78,	0,2812,13116,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	153880671	153888990	chrX:153880671-153888990	3	+	153880671	153880671	789624	7	47,186,326,74,170,95,494,	0,3039,3276,4691,5136,6291,7825,
#Deleted in new
chrX	153883863	153886161	chrX:153883863-153886161	0	-	153883863	153883863	8553170	2	643,97,	0,2201,
#Deleted in new
chrX	153902530	153907166	chrX:153902530-153907166	0	+	153905145	153906140	789624	4	362,197,398,644,	0,2443,3488,3992,
#Deleted in new
chrX	153904713	153907166	chrX:153904713-153907166	3	+	153905145	153906728	0	4	58,197,885,644,	0,260,818,1809,
#Deleted in new
chrX	153904738	153907166	chrX:153904738-153907166	1	+	153905145	153906728	0	4	33,197,885,644,	0,235,793,1784,
#Deleted in new
chrX	153905000	153906816	chrX:153905000-153906816	0	+	153905145	153906816	789624	3	170,797,294,	0,531,1522,
#Deleted in new
chrX	153905074	153907163	chrX:153905074-153907163	1	+	153905145	153906728	0	3	96,885,641,	0,457,1448,
#Deleted in new
chrX	153905113	153906781	chrX:153905113-153906781	1	+	153905145	153906436	0	2	57,1250,	0,418,
#Partially deleted in new
chrX	153907366	153926254	chrX:153907366-153926254	3	-	153907728	153926202	789624	19	596,100,93,184,74,234,106,135,78,61,103,28,85,192,102,63,163,205,119,	0,1703,2076,2374,2645,2804,3139,3333,3555,3762,5333,5657,5851,6042,6411,13730,13998,14238,18769,
#Partially deleted in new
chrX	153907375	153926260	chrX:153907375-153926260	1	-	153907728	153926202	0	23	587,100,93,184,74,234,106,135,78,61,103,28,85,192,102,222,129,120,183,63,163,205,125,	0,1694,2067,2365,2636,2795,3130,3324,3546,3753,5324,5648,5842,6033,6402,11456,11779,12191,13250,13721,13989,14229,18760,
#Partially deleted in new
chrX	153907376	153926244	chrX:153907376-153926244	1	-	153907728	153926202	0	22	586,100,93,184,74,234,106,135,78,61,103,28,85,192,102,222,129,183,63,163,205,109,	0,1693,2066,2364,2635,2794,3129,3323,3545,3752,5323,5647,5841,6032,6401,11455,11778,13249,13720,13988,14228,18759,
#Partially deleted in new
chrX	153907376	153926244	chrX:153907376-153926244	0	-	153909858	153926202	789624	19	586,100,93,184,74,135,61,103,28,85,192,102,222,129,183,63,163,205,109,	0,1693,2066,2364,2635,3323,3752,5323,5647,5841,6032,6401,11455,11778,13249,13720,13988,14228,18759,
#Partially deleted in new
chrX	153907414	153912737	chrX:153907414-153912737	0	-	153907414	153907414	8553170	10	548,100,93,184,74,441,135,78,61,38,	0,1655,2028,2326,2597,2756,3285,3507,3714,5285,
#Deleted in new
chrX	153907438	153909658	chrX:153907438-153909658	0	-	153907438	153907438	8553170	3	524,100,216,	0,1631,2004,
#Partially deleted in new
chrX	153907453	153926244	chrX:153907453-153926244	1	-	153907728	153926202	789624	21	509,100,93,184,74,234,106,135,78,61,103,28,85,192,102,222,129,183,163,205,109,	0,1616,1989,2287,2558,2717,3052,3246,3468,3675,5246,5570,5764,5955,6324,11378,11701,13172,13911,14151,18682,
#Partially deleted in new
chrX	153907453	153926244	chrX:153907453-153926244	0	-	153907453	153907453	8553170	18	509,100,93,184,74,234,106,135,78,61,103,28,383,102,222,163,205,109,	0,1616,1989,2287,2558,2717,3052,3246,3468,3675,5246,5570,5764,6324,11378,13911,14151,18682,
#Partially deleted in new
chrX	153907453	153926244	chrX:153907453-153926244	0	-	153907453	153907453	8553170	17	509,100,93,184,74,234,106,135,78,61,103,28,383,102,163,205,109,	0,1616,1989,2287,2558,2717,3052,3246,3468,3675,5246,5570,5764,6324,13911,14151,18682,
#Partially deleted in new
chrX	153907468	153926305	chrX:153907468-153926305	0	-	153920680	153926202	789624	22	494,100,93,184,74,234,106,135,78,61,103,28,85,192,102,222,129,211,63,163,205,170,	0,1601,1974,2272,2543,2702,3037,3231,3453,3660,5231,5555,5749,5940,6309,11363,11686,13157,13628,13896,14136,18667,
#Deleted in new
chrX	153909467	153911101	chrX:153909467-153911101	0	-	153909467	153911101	789624	6	68,184,74,106,135,180,	0,273,544,1038,1232,1454,
#Deleted in new
chrX	153909507	153910871	chrX:153909507-153910871	0	-	153909507	153909507	8553170	6	28,184,74,234,106,172,	0,233,504,663,998,1192,
#Partially deleted in new
chrX	153909740	153912785	chrX:153909740-153912785	0	-	153909740	153912785	789624	7	184,74,234,106,135,61,86,	0,271,430,765,959,1388,2959,
#Deleted in new
chrX	153909818	153910519	chrX:153909818-153910519	0	-	153909818	153909818	8553170	2	106,508,	0,193,
#Partially deleted in new
chrX	153913209	153934999	chrX:153913209-153934999	0	-	153913209	153913209	8553170	14	391,102,222,129,183,63,163,205,45,116,46,59,99,116,	0,568,5622,5945,7416,7887,8155,8395,18861,19106,19329,20733,21167,21674,
#Partially deleted in new
chrX	153913227	153920631	chrX:153913227-153920631	0	-	153913227	153920631	789624	6	75,108,102,222,129,6,	0,181,550,5604,5927,7398,
#Deleted in new
chrX	153913523	153914253	chrX:153913523-153914253	0	-	153913523	153913523	8553170	2	77,476,	0,254,
#Partially deleted in new
chrX	153918841	153926757	chrX:153918841-153926757	0	-	153918841	153921807	789624	7	212,129,183,63,163,205,168,	0,313,1784,2255,2523,2763,7748,
#Partially deleted in new
chrX	153918939	153921404	chrX:153918939-153921404	0	-	153918939	153921404	789624	5	114,129,120,183,40,	0,215,627,1686,2425,
#Partially deleted in new
chrX	153918961	153922248	chrX:153918961-153922248	0	-	153918961	153921807	789624	7	92,129,183,63,163,205,125,	0,193,1664,2135,2403,2643,3162,
#Partially deleted in new
chrX	153920411	153921400	chrX:153920411-153921400	0	-	153920411	153920411	8553170	3	397,63,36,	0,685,953,
#Partially deleted in new
chrX	153920707	153928419	chrX:153920707-153928419	0	-	153920707	153921807	789624	5	101,63,163,205,93,	0,389,657,897,7619,
#Partially deleted in new
chrX	153920714	153926860	chrX:153920714-153926860	0	-	153920714	153921807	789624	5	94,63,163,205,45,	0,382,650,890,6101,
#Partially deleted in new
chrX	153920738	153928354	chrX:153920738-153928354	0	-	153920738	153920738	8553170	5	70,127,163,205,28,	0,358,626,866,7588,
#Partially deleted in new
chrX	153929241	153935223	chrX:153929241-153935223	3	-	153929986	153934904	0	8	982,85,45,116,46,59,99,340,	0,1521,2829,3074,3297,4701,5135,5642,
#Partially deleted in new
chrX	153929826	153931440	chrX:153929826-153931440	0	-	153929826	153929826	8553170	2	397,678,	0,936,
#Partially deleted in new
chrX	153929913	153935041	chrX:153929913-153935041	1	-	153930268	153934904	789624	8	394,85,45,116,46,59,99,158,	0,849,2157,2402,2625,4029,4463,4970,
#Partially deleted in new
chrX	153929920	153934958	chrX:153929920-153934958	1	-	153930219	153934904	789624	8	383,85,45,116,46,59,99,75,	0,842,2150,2395,2618,4022,4456,4963,
#Partially deleted in new
chrX	153929923	153935015	chrX:153929923-153935015	1	-	153929986	153934904	0	7	300,85,116,46,59,99,132,	0,839,2392,2615,4019,4453,4960,
#Partially deleted in new
chrX	153929925	153935015	chrX:153929925-153935015	0	-	153929925	153929925	8553170	7	298,85,361,46,59,99,132,	0,837,2145,2613,4017,4451,4958,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	153930040	153932982	chrX:153930040-153932982	0	-	153930040	153930040	8553170	5	183,85,45,116,444,	0,722,2030,2275,2498,
#Partially deleted in new
chrX	153930075	153934785	chrX:153930075-153934785	0	-	153930075	153930075	8553170	7	148,85,45,116,46,59,409,	0,687,1995,2240,2463,3867,4301,
#Partially deleted in new
chrX	153930204	153935015	chrX:153930204-153935015	0	-	153930204	153934904	789624	7	19,85,116,46,41,99,132,	0,558,2111,2334,3756,4172,4679,
#Partially deleted in new
chrX	153930292	153932258	chrX:153930292-153932258	0	-	153930292	153930292	8553170	2	555,188,	0,1778,
#Partially deleted in new
chrX	153930778	153935066	chrX:153930778-153935066	0	-	153930778	153934904	789624	7	69,45,116,46,41,99,183,	0,1292,1537,1760,3182,3598,4105,
#Partially deleted in new
chrX	153931770	153935080	chrX:153931770-153935080	0	-	153931770	153931770	8553170	5	661,46,59,99,197,	0,768,2172,2606,3113,
#Partially deleted in new
chrX	153931953	153935015	chrX:153931953-153935015	0	-	153931953	153931953	8553170	7	28,45,116,46,59,99,132,	0,117,362,585,1989,2423,2930,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	153932066	153932982	chrX:153932066-153932982	0	-	153932066	153932066	8553170	2	365,444,	0,472,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	153933659	153935015	chrX:153933659-153935015	0	-	153933659	153933659	8553170	3	342,99,132,	0,717,1224,
#Deleted in new
chrX	153934029	153935006	chrX:153934029-153935006	0	-	153934029	153934029	8553170	2	446,123,	0,854,
#Partially deleted in new
chrX	153935262	153944691	chrX:153935262-153944691	3	-	153935285	153944610	789624	11	142,88,132,176,82,225,173,76,76,110,108,	0,226,4839,6215,6687,7592,8283,8632,8817,9046,9321,
#Partially deleted in new
chrX	153935282	153944687	chrX:153935282-153944687	1	-	153935285	153944610	789624	11	122,88,132,176,82,225,173,76,34,110,104,	0,206,4819,6195,6667,7572,8263,8612,8839,9026,9301,
#Partially deleted in new
chrX	153935285	153944626	chrX:153935285-153944626	0	-	153944113	153944610	789624	11	119,88,132,176,82,225,173,76,76,110,47,	0,203,4816,6192,6664,7569,8260,8609,8794,9023,9294,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	153942244	153943632	chrX:153942244-153943632	0	-	153942244	153942244	8553170	3	297,225,87,	0,610,1301,
#Deleted in new
chrX	153943057	153944232	chrX:153943057-153944232	0	-	153943057	153943057	8553170	4	22,173,76,153,	0,488,837,1022,
#Deleted in new
chrX	153943534	153944611	chrX:153943534-153944611	0	-	153943534	153943534	8553170	4	184,76,110,28,	0,360,774,1049,
#Deleted in new
chrX	153943613	153944643	chrX:153943613-153944643	0	-	153943613	153943613	8553170	4	105,76,339,60,	0,281,466,970,
#Deleted in new
chrX	153947552	153971807	chrX:153947552-153971807	3	-	153949346	153970840	0	26	1834,64,301,186,138,119,318,445,164,1477,221,139,143,220,105,225,198,161,360,180,107,85,209,161,149,1160,	0,2000,2690,3260,3797,4036,4288,4961,6054,6513,8638,9072,9365,9761,10229,10472,11016,11778,12249,12682,13989,14669,15672,16571,17025,23095,
#Deleted in new
chrX	153947556	153954121	chrX:153947556-153954121	0	-	153949346	153954121	789624	10	1830,64,301,186,138,119,321,445,164,56,	0,1996,2686,3256,3793,4032,4284,4957,6050,6509,
#Deleted in new
chrX	153947558	153971184	chrX:153947558-153971184	1	-	153949346	153970840	789624	26	1828,64,301,186,138,119,321,577,164,1477,221,139,143,220,105,225,198,161,360,180,107,85,209,161,149,537,	0,1994,2684,3254,3791,4030,4282,4955,6048,6507,8632,9066,9359,9755,10223,10466,11010,11772,12243,12676,13983,14663,15666,16565,17019,23089,
#Deleted in new
chrX	153960008	153962267	chrX:153960008-153962267	0	-	153960008	153960008	8553170	3	153,180,46,	0,226,2213,
#Deleted in new
chrX	153969324	153970087	chrX:153969324-153970087	3	+	153969324	153969324	8553170	2	47,303,	0,460,
#Partially deleted in new
chrX	153972326	153983195	chrX:153972326-153983195	3	+	153982062	153982848	789624	2	534,1346,	0,9523,
#Partially deleted in new
chrX	153972857	153982260	chrX:153972857-153982260	0	+	153982062	153982260	789624	2	29,411,	0,8992,
#Partially deleted in new
chrX	153980605	153982161	chrX:153980605-153982161	0	+	153982062	153982161	789624	2	18,312,	0,1244,
#Deleted in new
chrX	153981096	153981177	chrX:153981096-153981177	3	+	153981096	153981096	5263520	1	81,	0,
#Deleted in new
chrX	153981097	153981176	chrX:153981097-153981176	3	-	153981097	153981097	5263520	1	79,	0,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chrX	154010499	154019980	chrX:154010499-154019980	3	-	154011858	154019812	0	14	1418,150,391,237,66,208,119,115,65,189,104,132,168,304,	0,2029,2543,3542,5532,5937,6449,7506,7791,8099,8475,8697,8931,9177,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrX	154010505	154019876	chrX:154010505-154019876	1	-	154011858	154019812	0	13	1412,150,391,66,208,119,115,65,189,104,132,168,200,	0,2023,2537,5526,5931,6443,7500,7785,8093,8469,8691,8925,9171,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	154010519	154019800	chrX:154010519-154019800	0	-	154010939	154019800	789624	5	597,104,132,168,124,	0,8455,8677,8911,9157,
#Partially deleted in new
chrX	154010721	154018647	chrX:154010721-154018647	0	-	154010721	154010721	8553170	7	90,59,208,119,115,65,49,	0,5317,5715,6227,7284,7569,7877,
#Partially deleted in new
chrX	154011562	154016073	chrX:154011562-154016073	0	-	154011707	154016073	789624	4	355,150,237,42,	0,966,2479,4469,
#Partially deleted in new
chrX	154011687	154019897	chrX:154011687-154019897	0	-	154016615	154019812	789624	12	230,150,391,237,66,208,119,65,189,104,132,467,	0,841,1355,2354,4344,4749,5261,6603,6911,7287,7509,7743,
#Partially deleted in new
chrX	154011730	154014246	chrX:154011730-154014246	0	-	154011858	154014246	789624	3	187,391,205,	0,1312,2311,
#Partially deleted in new
chrX	154011826	154016994	chrX:154011826-154016994	0	-	154011858	154016994	789624	6	91,150,301,66,208,46,	0,702,1216,4205,4610,5122,
#Partially deleted in new
chrX	154011858	154019812	chrX:154011858-154019812	1	-	154011858	154019812	0	14	59,150,301,237,66,208,119,115,65,189,104,132,168,136,	0,670,1184,2183,4173,4578,5090,6147,6432,6740,7116,7338,7572,7818,
#Partially deleted in new
chrX	154011858	154019812	chrX:154011858-154019812	1	-	154011858	154019812	789624	13	59,150,301,237,66,208,119,115,65,189,104,132,382,	0,670,1184,2183,4173,4578,5090,6147,6432,6740,7116,7338,7572,
#Partially deleted in new
chrX	154013042	154018638	chrX:154013042-154018638	0	-	154013042	154018638	789624	7	391,237,208,119,115,65,40,	0,999,3394,3906,4963,5248,5556,
#Partially deleted in new
chrX	154013335	154014377	chrX:154013335-154014377	0	-	154013335	154013335	8553170	2	98,336,	0,706,
#Deleted in new
chrX	154018345	154018945	chrX:154018345-154018945	0	-	154018345	154018345	8553170	2	10,347,	0,253,
#Deleted in new
chrX	154019919	154019989	chrX:154019919-154019989	3	-	154019919	154019919	5263520	1	70,	0,
#Partially deleted in new
chrX	154021572	154097755	chrX:154021572-154097755	3	-	154030366	154092209	0	4	9878,351,124,152,	0,10634,70611,76031,
#Partially deleted in new
chrX	154030233	154097764	chrX:154030233-154097764	1	-	154030366	154097665	0	3	1217,351,161,	0,1973,67370,
#Partially deleted in new
chrX	154030238	154097737	chrX:154030238-154097737	1	-	154031199	154092209	789624	5	1048,55,351,124,134,	0,1157,1968,61945,67365,
#Partially deleted in new
chrX	154030604	154097689	chrX:154030604-154097689	1	-	154031199	154097665	789624	4	682,55,351,86,	0,791,1602,66999,
#Partially deleted in new
chrX	154030605	154092293	chrX:154030605-154092293	1	-	154030605	154092209	789624	4	49,387,351,110,	0,458,1601,61578,
#Partially deleted in new
chrX	154030838	154092293	chrX:154030838-154092293	1	-	154030838	154092197	789624	4	117,493,351,110,	0,119,1368,61345,
#Deleted in new
chrX	154030842	154032216	chrX:154030842-154032216	0	-	154030842	154032216	789624	3	94,55,10,	0,553,1364,
#Partially deleted in new
chrX	154031268	154060358	chrX:154031268-154060358	0	-	154031268	154031268	8553170	5	182,351,314,100,1960,	0,938,25672,26474,27130,
#Partially deleted in new
chrX	154031306	154092293	chrX:154031306-154092293	1	-	154031306	154092197	789624	4	36,106,351,110,	0,38,900,60877,
#Partially deleted in new
chrX	154031369	154097663	chrX:154031369-154097663	0	-	154058478	154092209	789624	5	81,351,168,124,60,	0,837,27029,60814,66234,
#Partially deleted in new
chrX	154032372	154096969	chrX:154032372-154096969	0	-	154032372	154032372	8553170	2	185,157,	0,64440,
#Partially deleted in new
chrX	154032433	154040103	chrX:154032433-154040103	0	-	154032433	154032433	8553170	2	124,312,	0,7358,
#Partially deleted in new
chrX	154032434	154096978	chrX:154032434-154096978	0	-	154032434	154092209	789624	3	123,124,166,	0,59749,64378,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	154032434	154049481	chrX:154032434-154049481	0	-	154032434	154032434	8553170	4	123,112,98,965,	0,7357,15747,16082,
#Partially deleted in new
chrX	154032434	154049481	chrX:154032434-154049481	0	-	154032434	154032434	8553170	2	123,965,	0,16082,
#Partially deleted in new
chrX	154032434	154049479	chrX:154032434-154049479	0	-	154032434	154032434	8553170	3	123,112,963,	0,7357,16082,
#Deleted in new
chrX	154032458	154034174	chrX:154032458-154034174	0	-	154032458	154032458	8553170	2	99,251,	0,1465,
#Deleted in new
chrX	154032458	154034174	chrX:154032458-154034174	0	-	154032458	154032458	8553170	2	99,736,	0,980,
#Partially deleted in new
chrX	154032458	154094476	chrX:154032458-154094476	0	-	154032458	154092209	789624	3	99,124,99,	0,59725,61919,
#Partially deleted in new
chrX	154032474	154097025	chrX:154032474-154097025	0	-	154032474	154032474	8553170	2	83,57,	0,64494,
#Partially deleted in new
chrX	154033993	154092261	chrX:154033993-154092261	0	-	154033993	154033993	8553170	2	23,78,	0,58190,
#Deleted in new
chrX	154057147	154057810	chrX:154057147-154057810	0	-	154057147	154057147	8553170	2	32,68,	0,595,
#Partially deleted in new
chrX	154090801	154097680	chrX:154090801-154097680	0	-	154090801	154090801	8553170	3	380,124,77,	0,1382,6802,
#Partially deleted in new
chrX	154092231	154094780	chrX:154092231-154094780	0	-	154092231	154092231	8553170	2	76,25,	0,2524,
#Deleted in new
chrX	154094965	154097523	chrX:154094965-154097523	0	-	154094965	154094965	8553170	1	2558,	0,
#Partially deleted in new
chrX	154144223	154159032	chrX:154144223-154159032	3	+	154144283	154158926	789624	6	172,297,169,166,240,217,	0,6432,8716,10350,12070,14592,
#Partially deleted in new
chrX	154144273	154156397	chrX:154144273-154156397	0	+	154144273	154144273	8553170	4	122,297,169,104,	0,6382,8666,12020,
#Partially deleted in new
chrX	154152941	154159023	chrX:154152941-154159023	0	+	154152941	154158926	789624	4	167,166,51,208,	0,1632,3352,5874,
#Partially deleted in new
chrX	154159356	154176349	chrX:154159356-154176349	7	-	154159356	154159356	16724991	3	357,136,728,	0,976,16265,
#Partially deleted in new
chrX	154182595	154196105	chrX:154182595-154196105	3	+	154182677	154196040	0	6	194,297,169,166,240,176,	0,5174,7458,9092,10812,13334,
#Partially deleted in new
chrX	154182667	154193511	chrX:154182667-154193511	0	+	154182667	154182667	8553170	4	122,297,169,104,	0,5102,7386,10740,
#Partially deleted in new
chrX	154190057	154196135	chrX:154190057-154196135	0	+	154190057	154196040	789624	4	165,166,51,206,	0,1630,3350,5872,
#Partially deleted in new
chrX	154196470	154213487	chrX:154196470-154213487	7	-	154196470	154196470	16724991	3	357,136,728,	0,976,16289,
#Partially deleted in new
chrX	154219755	154233286	chrX:154219755-154233286	3	+	154219815	154233180	789624	6	172,297,169,166,240,217,	0,5152,7436,9072,10792,13314,
#Partially deleted in new
chrX	154219796	154230651	chrX:154219796-154230651	0	+	154219796	154219796	8553170	4	131,297,169,104,	0,5111,7395,10751,
#Partially deleted in new
chrX	154227195	154233277	chrX:154227195-154233277	0	+	154227195	154233180	789624	4	165,166,51,208,	0,1632,3352,5874,
#Partially deleted in new
chrX	154233614	154251288	chrX:154233614-154251288	7	-	154233614	154233614	16724991	3	353,136,727,	0,972,16947,
#Partially deleted in new
chrX	154257537	154271805	chrX:154257537-154271805	3	+	154257619	154270984	789624	6	194,297,169,166,240,932,	0,5174,7458,9094,10814,13336,
#Partially deleted in new
chrX	154271264	154295211	chrX:154271264-154295211	3	-	154271414	154292117	789624	5	507,136,728,100,78,	0,1126,16415,20841,23869,
#Partially deleted in new
chrX	154271266	154295085	chrX:154271266-154295085	1	-	154271414	154292117	789624	5	505,136,728,100,56,	0,1124,16413,20839,23763,
#Partially deleted in new
chrX	154271414	154292117	chrX:154271414-154292117	1	-	154271414	154292117	789624	4	357,136,728,12,	0,976,16265,20691,
#Partially deleted in new
chrX	154288335	154295853	chrX:154288335-154295853	0	-	154288335	154288335	8553170	4	72,90,100,167,	0,1395,3770,7351,
#Partially deleted in new
chrX	154295670	154330350	chrX:154295670-154330350	3	+	154295859	154329688	789624	13	323,118,98,192,128,194,165,157,131,84,97,120,835,	0,9633,13674,15165,15440,16909,19502,25086,27536,29668,31920,32168,33845,
#Partially deleted in new
chrX	154295798	154312640	chrX:154295798-154312640	0	+	154295859	154311184	789624	5	195,118,58,128,61,	0,9505,13546,15312,16781,
#Partially deleted in new
chrX	154304922	154311160	chrX:154304922-154311160	0	+	154304952	154311160	789624	5	164,118,98,192,50,	0,381,4422,5913,6188,
#Partially deleted in new
chrX	154305043	154311146	chrX:154305043-154311146	0	+	154305043	154311146	789624	5	81,118,98,192,36,	0,260,4301,5792,6067,
#Partially deleted in new
chrX	154305056	154330350	chrX:154305056-154330350	1	+	154305337	154329688	789624	12	365,98,192,128,194,165,157,131,84,97,120,835,	0,4288,5779,6054,7523,10116,15700,18150,20282,22534,22782,24459,
#Partially deleted in new
chrX	154320303	154325385	chrX:154320303-154325385	0	+	154320303	154320303	8553170	4	220,157,131,47,	0,453,2903,5035,
#Partially deleted in new
chrX	154327183	154327899	chrX:154327183-154327899	0	+	154327183	154327183	8553170	2	504,61,	0,655,
#Partially deleted in new
chrX	154327375	154329688	chrX:154327375-154329688	0	+	154327375	154327375	8553170	4	51,97,120,173,	0,215,463,2140,
#Partially deleted in new
chrX	154333959	154335037	chrX:154333959-154335037	3	-	154333959	154333959	8553170	2	315,26,	0,1052,
#Partially deleted in new
chrX	154348523	154371203	chrX:154348523-154371203	0	-	154364688	154371203	789624	47	513,204,219,177,133,116,138,267,123,153,204,162,174,129,141,103,96,248,24,190,157,124,171,161,163,174,598,263,118,170,91,161,124,144,114,194,137,122,138,201,163,78,119,148,98,249,331,	0,838,1125,1507,2385,3057,3360,3657,4029,4248,4477,4772,5030,5391,5627,5857,6092,6301,8727,8910,9675,9921,10460,10722,10960,11208,11466,12784,13146,13455,13718,13894,14137,15498,15735,16002,16297,16612,16825,17500,17784,18038,18208,18873,19117,19318,22349,
#Partially deleted in new
chrX	154348525	154374638	chrX:154348525-154374638	3	-	154348848	154371245	0	48	511,204,219,177,133,116,138,267,123,153,204,162,174,129,141,103,96,248,24,190,157,124,171,161,163,174,598,263,118,170,91,161,124,144,114,194,137,124,138,201,163,78,119,148,98,249,489,133,	0,836,1123,1505,2383,3055,3358,3655,4027,4246,4475,4770,5028,5389,5625,5855,6090,6299,8725,8908,9673,9919,10458,10720,10958,11206,11464,12782,13144,13453,13716,13892,14135,15496,15733,16000,16295,16610,16823,17498,17782,18036,18206,18871,19115,19316,22347,25980,
#Partially deleted in new
chrX	154348528	154371283	chrX:154348528-154371283	1	-	154348848	154371245	0	46	508,204,219,177,133,116,138,267,123,153,204,162,174,129,141,103,96,248,190,157,124,171,161,163,174,598,263,118,170,91,161,124,144,114,194,137,124,138,201,163,78,119,148,98,249,411,	0,833,1120,1502,2380,3052,3355,3652,4024,4243,4472,4767,5025,5386,5622,5852,6087,6296,8905,9670,9916,10455,10717,10955,11203,11461,12779,13141,13450,13713,13889,14132,15493,15730,15997,16292,16607,16820,17495,17779,18033,18203,18868,19112,19313,22344,
#Partially deleted in new
chrX	154348528	154371222	chrX:154348528-154371222	1	-	154348848	154371164	789624	47	508,204,219,177,133,116,138,267,123,153,204,162,174,129,141,103,96,248,24,190,157,124,171,161,163,174,598,263,118,170,91,161,124,144,114,194,137,124,138,201,163,78,119,148,98,249,350,	0,833,1120,1502,2380,3052,3355,3652,4024,4243,4472,4767,5025,5386,5622,5852,6087,6296,8722,8905,9670,9916,10455,10717,10955,11203,11461,12779,13141,13450,13713,13889,14132,15493,15730,15997,16292,16607,16820,17495,17779,18033,18203,18868,19112,19313,22344,
#Deleted in new
chrX	154348529	154352883	chrX:154348529-154352883	0	-	154348529	154348529	8553170	2	301,67,	0,4287,
#Partially deleted in new
chrX	154348531	154374638	chrX:154348531-154374638	1	-	154348848	154371245	0	47	505,204,219,177,133,116,138,267,123,153,204,162,174,129,141,103,96,248,190,157,124,171,161,163,174,598,263,118,170,91,161,124,144,114,194,137,124,138,201,163,78,119,148,98,249,489,133,	0,830,1117,1499,2377,3049,3352,3649,4021,4240,4469,4764,5022,5383,5619,5849,6084,6293,8902,9667,9913,10452,10714,10952,11200,11458,12776,13138,13447,13710,13886,14129,15490,15727,15994,16289,16604,16817,17492,17776,18030,18200,18865,19109,19310,22341,25974,
#Partially deleted in new
chrX	154348531	154374638	chrX:154348531-154374638	1	-	154348848	154371164	789624	44	505,204,219,177,133,116,67,65,174,129,141,103,96,248,24,190,157,124,171,161,163,174,598,263,118,170,91,161,124,144,114,194,137,124,138,201,163,78,119,148,98,249,489,133,	0,830,1117,1499,2377,3049,3352,4861,5022,5383,5619,5849,6084,6293,8719,8902,9667,9913,10452,10714,10952,11200,11458,12776,13138,13447,13710,13886,14129,15490,15727,15994,16289,16604,16817,17492,17776,18030,18200,18865,19109,19310,22341,25974,
#Deleted in new
chrX	154348647	154359638	chrX:154348647-154359638	0	-	154348647	154348647	8553170	22	389,204,219,1666,138,267,123,153,204,162,174,129,141,103,96,248,190,157,124,171,161,155,	0,714,1001,1383,3236,3533,3905,4124,4353,4648,4906,5267,5503,5733,5968,6177,8786,9551,9797,10336,10598,10836,
#Deleted in new
chrX	154348919	154351203	chrX:154348919-154351203	0	-	154348919	154348919	8553170	6	117,204,219,177,133,64,	0,442,729,1111,1989,2220,
#Deleted in new
chrX	154348921	154350355	chrX:154348921-154350355	0	-	154348921	154348921	8553170	3	115,204,707,	0,440,727,
#Deleted in new
chrX	154351580	154353169	chrX:154351580-154353169	0	-	154351580	154353169	789624	5	116,138,267,153,169,	0,303,600,1191,1420,
#Deleted in new
chrX	154351727	154352783	chrX:154351727-154352783	0	-	154351727	154351727	8553170	4	294,267,123,12,	0,453,825,1044,
#Deleted in new
chrX	154352537	154353456	chrX:154352537-154353456	0	-	154352537	154352537	8553170	2	667,161,	0,758,
#Deleted in new
chrX	154352552	154353598	chrX:154352552-154353598	0	-	154353156	154353598	789624	5	123,153,221,162,45,	0,219,448,743,1001,
#Deleted in new
chrX	154353295	154354889	chrX:154353295-154354889	0	-	154353295	154354889	789624	6	162,129,141,103,96,65,	0,619,855,1085,1320,1529,
#Deleted in new
chrX	154354029	154354680	chrX:154354029-154354680	0	-	154354029	154354029	8553170	3	262,103,65,	0,351,586,
#Deleted in new
chrX	154357540	154358664	chrX:154357540-154358664	0	-	154357540	154357540	8553170	3	83,157,220,	0,658,904,
#Deleted in new
chrX	154364631	154365207	chrX:154364631-154365207	0	-	154364631	154364631	8553170	2	326,72,	0,504,
#Partially deleted in new
chrX	154374594	154376934	chrX:154374594-154376934	3	+	154374594	154374594	8553170	2	133,547,	0,1793,
#Deleted in new
chrX	154379196	154381523	chrX:154379196-154381523	3	+	154379484	154381197	0	6	370,105,78,134,50,642,	0,493,745,1037,1556,1685,
#Deleted in new
chrX	154379272	154381291	chrX:154379272-154381291	1	+	154379484	154381197	789624	5	294,78,134,50,410,	0,669,961,1480,1609,
#Deleted in new
chrX	154379340	154381279	chrX:154379340-154381279	0	+	154379340	154379340	8553170	4	226,105,426,527,	0,349,601,1412,
#Deleted in new
chrX	154379360	154381283	chrX:154379360-154381283	0	+	154379484	154379702	789624	6	177,105,78,134,50,402,	0,329,581,873,1392,1521,
#Deleted in new
chrX	154379403	154380955	chrX:154379403-154380955	0	+	154379403	154379403	8553170	3	163,426,203,	0,538,1349,
#Deleted in new
chrX	154379427	154380462	chrX:154379427-154380462	0	+	154379427	154379427	8553170	3	139,105,521,	0,262,514,
#Deleted in new
chrX	154379524	154380894	chrX:154379524-154380894	0	+	154379524	154379524	8553170	5	42,105,78,134,142,	0,165,417,709,1228,
#Deleted in new
chrX	154379624	154381281	chrX:154379624-154381281	0	+	154379624	154379624	8553170	5	170,78,134,50,400,	0,317,609,1128,1257,
#Deleted in new
chrX	154380564	154381443	chrX:154380564-154381443	0	+	154380564	154380564	8553170	2	238,562,	0,317,
#Partially deleted in new
chrX	154389954	154400897	chrX:154389954-154400897	0	+	154389954	154389954	8553170	6	18,330,46,59,108,1095,	0,8110,8542,9383,9532,9848,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	154396877	154398816	chrX:154396877-154398816	3	-	154396877	154396877	8553170	1	1939,	0,
#Deleted in new
chrX	154397153	154400917	chrX:154397153-154400917	1	+	154398519	154400854	789624	8	223,330,46,59,108,139,163,216,	0,911,1343,2184,2333,2649,3310,3548,
#Deleted in new
chrX	154397748	154398619	chrX:154397748-154398619	0	+	154397748	154397748	8553170	3	116,330,123,	0,316,748,
#Deleted in new
chrX	154398229	154402339	chrX:154398229-154402339	3	+	154398519	154400854	789624	7	165,46,59,108,139,163,1638,	0,267,1108,1257,1573,2234,2472,
#Deleted in new
chrX	154398229	154402339	chrX:154398229-154402339	1	+	154398519	154400854	789624	6	165,46,59,139,163,1638,	0,267,1108,1573,2234,2472,
#Deleted in new
chrX	154398366	154400811	chrX:154398366-154400811	0	+	154398519	154400811	789624	7	32,46,59,108,139,163,110,	0,130,971,1120,1436,2097,2335,
#Deleted in new
chrX	154398371	154402339	chrX:154398371-154402339	0	+	154398519	154400854	789624	6	171,59,108,139,163,1638,	0,966,1115,1431,2092,2330,
#Deleted in new
chrX	154398376	154400898	chrX:154398376-154400898	0	+	154398376	154398376	8553170	3	166,257,1096,	0,961,1426,
#Deleted in new
chrX	154398376	154400913	chrX:154398376-154400913	0	+	154398376	154398376	8553170	5	166,59,108,824,212,	0,961,1110,1426,2325,
#Deleted in new
chrX	154398377	154400917	chrX:154398377-154400917	0	+	154398519	154400917	789624	6	17,46,59,108,139,216,	0,119,960,1109,1425,2324,
#Deleted in new
chrX	154398378	154400817	chrX:154398378-154400817	0	+	154398378	154398378	8553170	5	164,257,139,163,116,	0,959,1424,2085,2323,
#Deleted in new
chrX	154398387	154400913	chrX:154398387-154400913	0	+	154398387	154398387	8553170	2	155,1576,	0,950,
#Deleted in new
chrX	154398496	154400913	chrX:154398496-154400913	0	+	154398496	154398496	8553170	5	46,59,108,139,450,	0,841,990,1306,1967,
#Deleted in new
chrX	154398889	154400909	chrX:154398889-154400909	1	+	154399557	154400854	789624	6	71,59,108,139,163,208,	0,448,597,913,1574,1812,
#Deleted in new
chrX	154399365	154403697	chrX:154399365-154403697	0	+	154399365	154403311	789624	4	31,108,139,435,	0,121,437,3897,
#Deleted in new
chrX	154399882	154403497	chrX:154399882-154403497	0	+	154399882	154403436	789624	3	59,163,235,	0,581,3380,
#Partially deleted in new
chrX	154399882	154409168	chrX:154399882-154409168	0	+	154399882	154409152	789624	3	59,163,70,	0,581,9216,
#Deleted in new
chrX	154399882	154403490	chrX:154399882-154403490	0	+	154399882	154402955	789624	2	59,563,	0,3045,
#Deleted in new
chrX	154400280	154400415	chrX:154400280-154400415	3	+	154400280	154400280	789624	1	135,	0,
#Partially deleted in new
chrX	154401237	154412090	chrX:154401237-154412090	1	-	154402706	154405568	789624	10	1604,249,113,101,87,89,222,85,258,200,	0,1704,2031,2284,3590,3757,4196,7874,8180,10653,
#Partially deleted in new
chrX	154401237	154412090	chrX:154401237-154412090	3	-	154402706	154405568	789624	8	1604,249,113,101,87,89,222,200,	0,1704,2031,2284,3590,3757,4196,10653,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	154401757	154410039	chrX:154401757-154410039	0	-	154402706	154405568	789624	9	1084,249,113,101,87,89,222,85,622,	0,1184,1511,1764,3070,3237,3676,7354,7660,
#Partially deleted in new
chrX	154401757	154409276	chrX:154401757-154409276	0	-	154402706	154405568	789624	8	1084,249,113,101,87,89,222,165,	0,1184,1511,1764,3070,3237,3676,7354,
#Partially deleted in new
chrX	154401757	154409278	chrX:154401757-154409278	0	-	154402706	154405568	789624	8	1084,249,113,101,87,89,222,721,	0,1184,1511,1764,3070,3237,3676,6800,
#Partially deleted in new
chrX	154401760	154412112	chrX:154401760-154412112	0	-	154402706	154405568	789624	9	1081,249,113,101,87,89,222,85,222,	0,1181,1508,1761,3067,3234,3673,7351,10130,
#Deleted in new
chrX	154402486	154403596	chrX:154402486-154403596	0	-	154402486	154402486	8553170	3	704,113,75,	0,782,1035,
#Partially deleted in new
chrX	154402721	154405610	chrX:154402721-154405610	0	-	154402721	154405568	789624	2	120,177,	0,2712,
#Partially deleted in new
chrX	154403091	154412083	chrX:154403091-154412083	0	-	154403091	154405568	789624	7	99,113,101,87,89,222,193,	0,177,430,1736,1903,2342,8799,
#Partially deleted in new
chrX	154403137	154405618	chrX:154403137-154405618	0	-	154403137	154405568	789624	2	53,185,	0,2296,
#Partially deleted in new
chrX	154404827	154412091	chrX:154404827-154412091	0	-	154404827	154405568	789624	6	87,89,222,85,258,201,	0,167,606,4284,4590,7063,
#Partially deleted in new
chrX	154405488	154412089	chrX:154405488-154412089	0	-	154405488	154405568	789624	4	167,85,396,199,	0,3623,3929,6402,
#Partially deleted in new
chrX	154411517	154420081	chrX:154411517-154420081	0	+	154411517	154411517	8553170	5	435,129,133,86,539,	0,568,1689,1964,8025,
#Partially deleted in new
chrX	154411523	154420042	chrX:154411523-154420042	0	+	154411523	154411523	8553170	6	429,129,46,86,81,338,	0,562,1683,1958,8019,8181,
#Partially deleted in new
chrX	154411540	154421726	chrX:154411540-154421726	1	+	154411843	154421004	789624	10	412,129,46,86,90,81,63,53,78,824,	0,545,1666,1941,2560,8002,8491,8671,9117,9362,
#Partially deleted in new
chrX	154411540	154421439	chrX:154411540-154421439	1	+	154411843	154421004	789624	9	412,129,46,86,81,63,53,78,537,	0,545,1666,1941,8002,8491,8671,9117,9362,
#Deleted in new
chrX	154411540	154414188	chrX:154411540-154414188	0	+	154411843	154414188	789624	5	466,129,46,86,88,	0,545,1666,1941,2560,
#Partially deleted in new
chrX	154411555	154421726	chrX:154411555-154421726	1	+	154411843	154421004	789624	11	397,129,46,86,90,81,42,63,53,78,824,	0,530,1651,1926,2545,7987,8149,8476,8656,9102,9347,
#Partially deleted in new
chrX	154411555	154420073	chrX:154411555-154420073	0	+	154411843	154420073	789624	7	451,129,46,86,81,42,42,	0,530,1651,1926,7987,8149,8476,
#Partially deleted in new
chrX	154411555	154421720	chrX:154411555-154421720	3	+	154411843	154421004	789624	10	397,129,46,86,81,42,63,53,78,818,	0,530,1651,1926,7987,8149,8476,8656,9102,9347,
#Deleted in new
chrX	154411558	154413669	chrX:154411558-154413669	0	+	154411558	154411558	8553170	3	394,129,463,	0,527,1648,
#Partially deleted in new
chrX	154411560	154421726	chrX:154411560-154421726	0	+	154411843	154413256	789624	10	392,129,152,86,81,42,63,53,78,824,	0,525,1646,1921,7982,8144,8471,8651,9097,9342,
#Deleted in new
chrX	154411561	154413567	chrX:154411561-154413567	0	+	154411843	154413256	789624	4	391,129,164,86,	0,524,1645,1920,
#Partially deleted in new
chrX	154411573	154420077	chrX:154411573-154420077	0	+	154411843	154413256	789624	5	379,129,133,86,46,	0,512,1633,1908,8458,
#Deleted in new
chrX	154411624	154412683	chrX:154411624-154412683	0	+	154411624	154411624	8553170	2	328,598,	0,461,
#Partially deleted in new
chrX	154411758	154421726	chrX:154411758-154421726	1	+	154411843	154421004	789624	7	248,46,86,81,233,78,824,	0,1448,1723,7784,8273,8899,9144,
#Partially deleted in new
chrX	154411829	154420094	chrX:154411829-154420094	0	+	154411843	154420094	789624	7	123,129,46,86,78,42,63,	0,256,1377,1652,7716,7875,8202,
#Partially deleted in new
chrX	154412160	154420992	chrX:154412160-154420992	0	+	154412160	154413256	789624	9	54,146,86,90,204,63,53,78,90,	0,1046,1321,1940,7382,7871,8051,8497,8742,
#Partially deleted in new
chrX	154412202	154419786	chrX:154412202-154419786	0	+	154412202	154412202	8553170	4	12,46,86,244,	0,1004,1279,7340,
#Partially deleted in new
chrX	154412714	154419952	chrX:154412714-154419952	0	+	154412714	154412714	8553170	5	151,46,86,90,410,	0,492,767,1386,6828,
#Deleted in new
chrX	154412720	154413567	chrX:154412720-154413567	0	+	154412720	154412720	8553170	3	267,46,86,	0,486,761,
#Deleted in new
chrX	154413090	154414141	chrX:154413090-154414141	0	+	154413090	154413090	8553170	2	477,41,	0,1010,
#Partially deleted in new
chrX	154413488	154419730	chrX:154413488-154419730	0	+	154413488	154413488	8553170	2	79,188,	0,6054,
#Partially deleted in new
chrX	154413528	154420141	chrX:154413528-154420141	0	+	154413528	154413528	8553170	4	39,81,42,110,	0,6014,6176,6503,
#Deleted in new
chrX	154418474	154421722	chrX:154418474-154421722	0	+	154418474	154418474	8553170	5	1272,63,53,78,820,	0,1557,1737,2183,2428,
#Deleted in new
chrX	154419990	154421324	chrX:154419990-154421324	0	+	154419990	154419990	8553170	5	104,53,78,234,68,	0,221,667,912,1266,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	154424379	154428479	chrX:154424379-154428479	3	-	154424379	154424379	789624	2	246,352,	0,3748,
#Partially deleted in new
chrX	154428631	154436516	chrX:154428631-154436516	3	+	154428692	154435891	789624	10	222,127,75,194,41,86,239,48,232,835,	0,416,3198,3634,4299,5003,5576,6507,6642,7050,
#Partially deleted in new
chrX	154428644	154435379	chrX:154428644-154435379	0	+	154428692	154435379	789624	6	209,127,75,111,239,106,	0,403,3185,3621,5563,6629,
#Partially deleted in new
chrX	154428662	154434219	chrX:154428662-154434219	0	+	154428692	154434219	789624	7	191,127,75,194,35,86,12,	0,385,3167,3603,4268,4972,5545,
#Partially deleted in new
chrX	154428686	154431600	chrX:154428686-154431600	0	+	154428692	154429291	789624	3	167,356,81,	0,361,2833,
#Partially deleted in new
chrX	154428688	154431879	chrX:154428688-154431879	0	+	154428692	154429291	789624	3	165,356,50,	0,359,3141,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	154428697	154436515	chrX:154428697-154436515	0	+	154428697	154429291	789624	10	156,2610,75,194,41,86,239,48,232,834,	0,350,3132,3568,4233,4937,5510,6441,6576,6984,
#Partially deleted in new
chrX	154428740	154435379	chrX:154428740-154435379	0	+	154428740	154434218	789624	7	113,127,75,61,239,48,106,	0,307,3089,4919,5467,6398,6533,
#Partially deleted in new
chrX	154428844	154436515	chrX:154428844-154436515	0	+	154428844	154428844	8553170	9	330,75,194,41,86,239,48,232,834,	0,2985,3421,4086,4790,5363,6294,6429,6837,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	154430583	154436515	chrX:154430583-154436515	1	+	154432940	154435891	789624	9	1074,75,194,41,86,239,48,232,834,	0,1246,1682,2347,3051,3624,4555,4690,5098,
#Deleted in new
chrX	154431721	154434269	chrX:154431721-154434269	0	+	154431721	154431721	8553170	5	183,194,41,86,62,	0,544,1209,1913,2486,
#Partially deleted in new
chrX	154436912	154439765	chrX:154436912-154439765	1	+	154437254	154439765	789624	5	387,108,100,135,56,	0,1610,1852,2093,2797,
#Partially deleted in new
chrX	154436919	154443467	chrX:154436919-154443467	3	+	154437254	154442672	789624	11	380,108,100,135,199,132,100,172,145,55,948,	0,1603,1845,2086,3021,3455,4176,4703,5191,5454,5600,
#Partially deleted in new
chrX	154437153	154439972	chrX:154437153-154439972	0	+	154437254	154438553	789624	5	146,155,100,135,32,	0,1322,1611,1852,2787,
#Deleted in new
chrX	154437153	154439251	chrX:154437153-154439251	0	+	154437153	154437153	8553170	4	146,108,100,246,	0,1369,1611,1852,
#Partially deleted in new
chrX	154437163	154440189	chrX:154437163-154440189	0	+	154437254	154439765	789624	6	136,108,100,135,88,249,	0,1359,1601,1842,2546,2777,
#Deleted in new
chrX	154437165	154439052	chrX:154437165-154439052	0	+	154437254	154438311	789624	5	134,171,108,100,47,	0,1050,1357,1599,1840,
#Partially deleted in new
chrX	154437188	154440500	chrX:154437188-154440500	0	+	154437188	154437188	8553170	5	111,108,100,135,560,	0,1334,1576,1817,2752,
#Deleted in new
chrX	154437659	154439093	chrX:154437659-154439093	0	+	154437659	154437659	8553170	4	283,108,100,88,	0,863,1105,1346,
#Partially deleted in new
chrX	154438005	154443465	chrX:154438005-154443465	0	+	154438005	154438005	8553170	5	625,100,135,1854,1355,	0,759,1000,1935,4105,
#Deleted in new
chrX	154439992	154442242	chrX:154439992-154442242	0	+	154439992	154439992	8553170	4	514,100,172,132,	0,1103,1630,2118,
#Deleted in new
chrX	154440267	154441390	chrX:154440267-154441390	0	+	154440267	154440267	8553170	2	239,295,	0,828,
#Deleted in new
chrX	154440523	154443465	chrX:154440523-154443465	0	+	154440523	154440523	8553170	4	1271,145,55,946,	0,1587,1850,1996,
#Deleted in new
chrX	154440650	154442098	chrX:154440650-154442098	0	+	154440650	154440650	8553170	2	545,476,	0,972,
#Deleted in new
chrX	154441765	154442728	chrX:154441765-154442728	0	+	154441765	154441765	8553170	3	490,55,209,	0,608,754,
#Deleted in new
chrX	154442048	154442718	chrX:154442048-154442718	0	+	154442048	154442048	8553170	2	207,345,	0,325,
#Partially deleted in new
chrX	154444125	154450654	chrX:154444125-154450654	3	+	154444235	154450432	789624	13	221,85,100,146,77,67,62,77,55,49,71,111,231,	0,1507,1686,2289,4358,4564,4767,5095,5555,5757,5903,6083,6298,
#Partially deleted in new
chrX	154444154	154450654	chrX:154444154-154450654	0	+	154444154	154444154	8553170	12	192,85,100,146,77,67,62,77,251,71,111,231,	0,1478,1657,2260,4329,4535,4738,5066,5526,5874,6054,6269,
#Partially deleted in new
chrX	154444247	154449081	chrX:154444247-154449081	0	+	154444247	154444247	8553170	7	99,85,100,146,77,67,189,	0,1385,1564,2167,4236,4442,4645,
#Partially deleted in new
chrX	154444458	154450099	chrX:154444458-154450099	0	+	154445641	154450099	789624	11	451,85,100,146,77,67,62,77,55,49,71,	0,1174,1353,1956,4025,4231,4434,4762,5222,5424,5570,
#Deleted in new
chrX	154445442	154445882	chrX:154445442-154445882	0	+	154445442	154445442	8553170	2	275,71,	0,369,
#Partially deleted in new
chrX	154446265	154449135	chrX:154446265-154449135	0	+	154446265	154446265	8553170	4	295,77,67,243,	0,2218,2424,2627,
#Deleted in new
chrX	154449886	154450289	chrX:154449886-154450289	0	+	154449886	154449886	8553170	2	213,81,	0,322,
#Deleted in new
chrX	154450319	154450386	chrX:154450319-154450386	3	+	154450319	154450319	5263520	1	67,	0,
#Boundary problem: need 33, got 0, diff 33, mapped 0.0
chrX	154458280	154477779	chrX:154458280-154477779	3	+	154460183	154472685	789624	33	148,621,540,183,129,101,124,157,100,115,201,97,191,146,121,137,171,94,240,144,235,143,257,67,147,160,104,97,191,170,213,151,5190,	0,1876,2818,3847,5110,5309,5670,5876,6121,6473,6737,7143,7376,7654,7869,8095,8342,8776,8951,9264,9486,9801,10022,10382,10542,10775,11098,11407,11696,12161,12824,13207,14309,
#Deleted in new
chrX	154458283	154461374	chrX:154458283-154461374	0	+	154458283	154458283	8553170	2	145,276,	0,2815,
#Deleted in new
chrX	154464448	154464980	chrX:154464448-154464980	0	+	154464448	154464448	8553170	2	53,227,	0,305,
#Deleted in new
chrX	154466090	154466765	chrX:154466090-154466765	0	+	154466090	154466090	8553170	3	180,137,143,	0,285,532,
#Deleted in new
chrX	154466418	154467175	chrX:154466418-154467175	0	+	154466418	154466418	8553170	3	94,171,119,	0,204,638,
#Deleted in new
chrX	154468616	154468869	chrX:154468616-154468869	0	+	154468616	154468616	8553170	2	113,47,	0,206,
#Deleted in new
chrX	154468660	154469350	chrX:154468660-154469350	0	+	154468660	154468660	8553170	2	309,295,	0,395,
#Deleted in new
chrX	154469081	154470708	chrX:154469081-154470708	0	+	154469081	154469081	8553170	5	134,104,97,191,267,	0,297,606,895,1360,
#Partially deleted in new
chrX	154470846	154472696	chrX:154470846-154472696	0	+	154470846	154470846	8553170	3	471,151,107,	0,641,1743,
#Deleted in new
chrX	154477768	154479257	chrX:154477768-154479257	3	-	154477943	154478915	789624	3	290,129,530,	0,514,959,
#Deleted in new
chrX	154483716	154486670	chrX:154483716-154486670	3	-	154485538	154486584	0	4	1933,209,106,134,	0,2054,2511,2820,
#Deleted in new
chrX	154484282	154486612	chrX:154484282-154486612	0	-	154484282	154484282	8553170	3	1367,209,76,	0,1488,2254,
#Deleted in new
chrX	154485192	154486615	chrX:154485192-154486615	1	-	154485329	154486584	789624	5	270,47,209,106,79,	0,410,578,1035,1344,
#Deleted in new
chrX	154485352	154486102	chrX:154485352-154486102	0	-	154485352	154485352	8553170	2	297,332,	0,418,
#Deleted in new
chrX	154485375	154486586	chrX:154485375-154486586	0	-	154485925	154486584	789624	4	274,313,106,50,	0,395,852,1161,
#Deleted in new
chrX	154485925	154486584	chrX:154485925-154486584	1	-	154485925	154486584	789624	2	54,48,	0,611,
#Deleted in new
chrX	154486041	154486584	chrX:154486041-154486584	0	-	154486041	154486041	8553170	2	292,48,	0,495,
#Deleted in new
chrX	154487305	154490690	chrX:154487305-154490690	3	-	154487506	154488940	789624	2	1777,384,	0,3001,
#Deleted in new
chrX	154487305	154490614	chrX:154487305-154490614	1	-	154487506	154488940	789624	4	1191,499,52,21,	0,1278,3001,3288,
#Deleted in new
chrX	154487310	154490628	chrX:154487310-154490628	1	-	154487506	154489964	789624	3	1772,86,35,	0,2631,3283,
#Deleted in new
chrX	154487342	154490663	chrX:154487342-154490663	1	-	154487506	154488940	789624	3	1740,52,70,	0,2964,3251,
#Deleted in new
chrX	154488286	154490677	chrX:154488286-154490677	0	-	154488286	154488940	789624	2	796,371,	0,2020,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	154495814	154496113	chrX:154495814-154496113	3	-	154495814	154495814	8553170	1	299,	0,
#Partially deleted in new
chrX	154506158	154516236	chrX:154506158-154516236	3	-	154506810	154515772	789624	10	748,127,85,51,59,124,24,114,53,327,	0,1044,1247,1652,2130,2315,5689,6664,9601,9751,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	154506159	154516242	chrX:154506159-154516242	1	-	154506810	154512893	789624	11	747,127,85,51,59,124,24,98,114,53,333,	0,1043,1246,1651,2129,2314,5688,6154,6663,9600,9750,
#Partially deleted in new
chrX	154506159	154516242	chrX:154506159-154516242	1	-	154506810	154515772	789624	8	747,127,85,59,124,24,114,483,	0,1043,1246,2129,2314,5688,6663,9600,
#Partially deleted in new
chrX	154506170	154516116	chrX:154506170-154516116	1	-	154506810	154515772	789624	10	736,127,85,51,59,124,24,114,53,148,	0,1032,1235,1640,2118,2303,5677,6652,9589,9798,
#Partially deleted in new
chrX	154506170	154516239	chrX:154506170-154516239	1	-	154506810	154515772	789624	9	736,127,85,51,59,124,24,114,480,	0,1032,1235,1640,2118,2303,5677,6652,9589,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	154506170	154516242	chrX:154506170-154516242	0	-	154512325	154515772	789624	10	736,127,85,51,59,124,24,98,114,483,	0,1032,1235,1640,2118,2303,5677,6143,6652,9589,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	154506172	154511412	chrX:154506172-154511412	0	-	154506172	154506172	8553170	6	734,127,85,51,59,2939,	0,1030,1233,1638,2116,2301,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrX	154506203	154516242	chrX:154506203-154516242	0	-	154512325	154515772	789624	9	703,127,85,59,124,24,98,114,483,	0,999,1202,2085,2270,5644,6110,6619,9556,
#Partially deleted in new
chrX	154506534	154516238	chrX:154506534-154516238	1	-	154506810	154515772	789624	10	372,127,85,72,59,124,24,114,53,329,	0,668,871,1276,1754,1939,5313,6288,9225,9375,
#Partially deleted in new
chrX	154506639	154516160	chrX:154506639-154516160	1	-	154506810	154515772	789624	9	267,127,85,51,59,124,24,53,251,	0,563,766,1171,1649,1834,5208,9120,9270,
#Deleted in new
chrX	154506710	154507591	chrX:154506710-154507591	0	-	154506710	154506710	8553170	2	196,389,	0,492,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	154507202	154516230	chrX:154507202-154516230	0	-	154512325	154515772	789624	10	127,85,51,59,124,24,98,114,53,321,	0,203,608,1086,1271,4645,5111,5620,8557,8707,
#Partially deleted in new
chrX	154507246	154516215	chrX:154507246-154516215	0	-	154508728	154515772	789624	9	83,85,51,59,338,24,114,53,306,	0,159,564,1042,1227,4601,5576,8513,8663,
#Partially deleted in new
chrX	154507405	154516217	chrX:154507405-154516217	0	-	154507405	154515772	789624	7	85,72,59,124,24,114,458,	0,405,883,1068,4442,5417,8354,
#Partially deleted in new
chrX	154507679	154515821	chrX:154507679-154515821	0	-	154508342	154515772	789624	5	182,59,24,114,62,	0,609,4168,5143,8080,
#Partially deleted in new
chrX	154507810	154516237	chrX:154507810-154516237	0	-	154508641	154515772	789624	6	51,59,179,24,114,478,	0,478,663,4037,5012,7949,
#Partially deleted in new
chrX	154508288	154516170	chrX:154508288-154516170	0	-	154508728	154515772	789624	4	59,338,24,411,	0,185,3559,7471,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	154508315	154516165	chrX:154508315-154516165	0	-	154512325	154515772	789624	6	32,179,24,98,114,406,	0,158,3532,3998,4507,7444,
#Partially deleted in new
chrX	154508452	154516158	chrX:154508452-154516158	0	-	154508452	154508452	8553170	3	145,24,399,	0,3395,7307,
#Partially deleted in new
chrX	154508571	154516209	chrX:154508571-154516209	0	-	154508571	154515772	789624	3	26,24,450,	0,3276,7188,
#Partially deleted in new
chrX	154508768	154516165	chrX:154508768-154516165	0	-	154508768	154508768	8553170	4	43,24,114,406,	0,3079,4054,6991,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrX	154511867	154516229	chrX:154511867-154516229	0	-	154512345	154515772	789624	4	4,118,114,470,	0,446,955,3892,
#Deleted in new
chrX	154517839	154518631	chrX:154517839-154518631	3	-	154517839	154517839	8553170	1	792,	0,
#Partially deleted in new
chrX	154531389	154547254	chrX:154531389-154547254	3	-	154531999	154546155	0	13	701,93,77,236,187,94,126,159,218,109,38,128,466,	0,798,996,1177,1552,2186,2645,2948,3778,4547,4751,14646,15399,
#Partially deleted in new
chrX	154531390	154546846	chrX:154531390-154546846	1	-	154531999	154546155	0	13	700,93,77,236,187,94,126,159,218,109,38,128,58,	0,797,995,1176,1551,2185,2644,2947,3777,4546,4750,14645,15398,
#Partially deleted in new
chrX	154531999	154547572	chrX:154531999-154547572	1	-	154531999	154546155	0	13	91,93,77,236,187,232,126,159,218,109,38,128,105,	0,188,386,567,942,1576,2035,2338,3168,3937,4141,14036,15468,
#Partially deleted in new
chrX	154531999	154547572	chrX:154531999-154547572	1	-	154531999	154546155	0	13	91,93,77,236,187,94,126,159,218,109,38,128,105,	0,188,386,567,942,1576,2035,2338,3168,3937,4141,14036,15468,
#Deleted in new
chrX	154532082	154533074	chrX:154532082-154533074	0	-	154532082	154532082	8553170	3	198,77,508,	0,303,484,
#Partially deleted in new
chrX	154532979	154546838	chrX:154532979-154546838	0	-	154532979	154546155	789624	9	149,94,126,162,218,109,38,128,50,	0,596,1055,1358,2188,2957,3161,13056,13809,
#Partially deleted in new
chrX	154533033	154547557	chrX:154533033-154547557	0	-	154533033	154546155	789624	9	95,94,126,162,218,109,38,124,90,	0,542,1001,1304,2134,2903,3107,13002,14434,
#Deleted in new
chrX	154533316	154534193	chrX:154533316-154534193	0	-	154533316	154533316	8553170	2	353,159,	0,718,
#Partially deleted in new
chrX	154534035	154546832	chrX:154534035-154546832	0	-	154534035	154546155	789624	7	125,159,218,109,38,124,44,	0,302,1132,1901,2105,12000,12753,
#Partially deleted in new
chrX	154535074	154546109	chrX:154535074-154546109	0	-	154535074	154535074	8553170	4	311,109,38,74,	0,862,1066,10961,
#Partially deleted in new
chrX	154535725	154546109	chrX:154535725-154546109	0	-	154535725	154535725	8553170	3	320,38,74,	0,415,10310,
#Partially deleted in new
chrX	154541198	154561768	chrX:154541198-154561768	0	+	154552002	154561768	789624	6	193,202,212,119,153,81,	0,10789,14966,17333,19208,20489,
#Partially deleted in new
chrX	154541254	154558650	chrX:154541254-154558650	0	+	154552002	154558650	789624	5	137,171,202,212,119,	0,1027,10733,14910,17277,
#Partially deleted in new
chrX	154542243	154565046	chrX:154542243-154565046	1	+	154542263	154564461	0	10	209,202,212,119,153,97,144,143,62,728,	0,9744,13921,16288,18163,19444,20566,21315,21715,22075,
#Partially deleted in new
chrX	154542262	154565033	chrX:154542262-154565033	0	+	154542263	154552010	789624	10	125,202,212,119,153,97,144,143,62,715,	0,9725,13902,16269,18144,19425,20547,21296,21696,22056,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	154545750	154546846	chrX:154545750-154546846	0	-	154545750	154545750	8553170	2	413,58,	0,1038,
#Partially deleted in new
chrX	154545926	154558546	chrX:154545926-154558546	0	+	154552002	154558546	789624	4	264,202,212,15,	0,6061,10238,12605,
#Partially deleted in new
chrX	154547306	154565046	chrX:154547306-154565046	3	+	154552002	154564461	0	10	439,202,212,119,153,97,144,143,62,728,	0,4681,8858,11225,13100,14381,15503,16252,16652,17012,
#Partially deleted in new
chrX	154547358	154560511	chrX:154547358-154560511	0	+	154552038	154560511	789624	5	277,179,212,119,105,	0,4652,8806,11173,13048,
#Partially deleted in new
chrX	154547637	154564562	chrX:154547637-154564562	1	+	154552002	154564461	789624	10	108,202,212,116,153,76,144,143,62,244,	0,4350,8527,10897,12769,14050,15172,15921,16321,16681,
#Partially deleted in new
chrX	154547637	154564562	chrX:154547637-154564562	1	+	154552002	154564461	789624	10	108,202,212,119,153,76,144,143,62,244,	0,4350,8527,10894,12769,14050,15172,15921,16321,16681,
#Partially deleted in new
chrX	154547640	154565033	chrX:154547640-154565033	1	+	154552002	154564461	789624	10	105,202,212,116,153,97,144,143,62,715,	0,4347,8524,10894,12766,14047,15169,15918,16318,16678,
#Partially deleted in new
chrX	154547641	154565033	chrX:154547641-154565033	1	+	154552002	154564461	0	8	104,202,212,119,97,143,62,715,	0,4346,8523,10890,14046,15917,16317,16677,
#Partially deleted in new
chrX	154547689	154561763	chrX:154547689-154561763	0	+	154558534	154561763	789624	5	56,84,119,153,76,	0,8603,10842,12717,13998,
#Partially deleted in new
chrX	154547846	154565046	chrX:154547846-154565046	1	+	154552002	154564461	0	10	243,202,212,119,153,97,144,143,62,728,	0,4141,8318,10685,12560,13841,14963,15712,16112,16472,
#Partially deleted in new
chrX	154551990	154562895	chrX:154551990-154562895	0	+	154551990	154551990	8553170	2	199,86,	0,10819,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	154552170	154556860	chrX:154552170-154556860	0	+	154552170	154556854	789624	3	19,212,321,	0,3994,4369,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	154571247	154571955	chrX:154571247-154571955	0	+	154571247	154571247	8553170	1	708,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	154571247	154571960	chrX:154571247-154571960	3	+	154571247	154571247	789624	1	713,	0,
#Partially deleted in new
chrX	154580925	154581998	chrX:154580925-154581998	7	+	154580925	154580925	16724991	1	1073,	0,
#Deleted in new
chrX	154585142	154586821	chrX:154585142-154586821	1	+	154585206	154586525	789624	5	333,166,9,33,452,	0,1009,1180,1193,1227,
#Deleted in new
chrX	154585153	154586816	chrX:154585153-154586816	3	+	154585206	154586664	0	3	322,135,291,	0,998,1372,
#Deleted in new
chrX	154605857	154605950	chrX:154605857-154605950	7	+	154605857	154605857	16724991	1	93,	0,
#Deleted in new
chrX	154617608	154619271	chrX:154617608-154619271	3	-	154617760	154619218	0	3	291,135,322,	0,530,1341,
#Deleted in new
chrX	154617608	154619282	chrX:154617608-154619282	1	-	154618035	154619218	0	2	665,333,	0,1341,
#Deleted in new
chrX	154620095	154620171	chrX:154620095-154620171	7	+	154620095	154620095	16724991	1	76,	0,
#Partially deleted in new
chrX	154622427	154623500	chrX:154622427-154623500	7	-	154622427	154622427	16724991	1	1073,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	154632469	154633182	chrX:154632469-154633182	3	-	154632469	154632469	5263520	1	713,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	154632474	154633182	chrX:154632474-154633182	0	-	154632474	154632474	8553170	1	708,	0,
#Partially deleted in new
chrX	154639977	154648275	chrX:154639977-154648275	7	-	154639977	154639977	16724991	8	141,62,143,144,97,153,119,214,	0,439,758,1507,2676,3901,5810,8084,
#Deleted in new
chrX	154651971	154653579	chrX:154651971-154653579	1	-	154652267	154653515	789624	2	660,333,	0,1275,
#Deleted in new
chrX	154651976	154653568	chrX:154651976-154653568	3	-	154652128	154653515	789624	3	291,135,322,	0,520,1270,
#Partially deleted in new
chrX	154654545	154655325	chrX:154654545-154655325	7	+	154654545	154654545	16724991	2	97,235,	0,545,
#Deleted in new
chrX	154658740	154659643	chrX:154658740-154659643	7	-	154658740	154658740	16724991	1	903,	0,
#Partially deleted in new
chrX	154675248	154751583	chrX:154675248-154751583	0	-	154675248	154675248	789624	9	3046,117,103,82,220,56,220,304,92,	0,4883,20668,21883,24045,24755,37958,40777,76243,
#Partially deleted in new
chrX	154675252	154751057	chrX:154675252-154751057	3	-	154678177	154751025	789624	10	3042,117,103,82,220,56,473,217,304,104,	0,4879,20664,21879,24041,24751,36976,37954,40773,75701,
#Partially deleted in new
chrX	154676168	154751073	chrX:154676168-154751073	0	-	154678177	154751025	789624	9	2126,103,82,220,56,473,220,304,120,	0,19748,20963,23125,23835,36060,37038,39857,74785,
#Partially deleted in new
chrX	154677965	154751077	chrX:154677965-154751077	1	-	154678177	154751025	789624	10	329,117,103,82,220,56,473,220,304,124,	0,2166,17951,19166,21328,22038,34263,35241,38060,72988,
#Partially deleted in new
chrX	154678289	154696092	chrX:154678289-154696092	0	-	154678289	154678289	8553170	3	5,117,176,	0,1842,17627,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	154678977	154680219	chrX:154678977-154680219	0	-	154678977	154680219	789624	2	362,88,	0,1154,
#Partially deleted in new
chrX	154762741	154777688	chrX:154762741-154777688	1	+	154762965	154774709	789624	14	240,68,87,92,185,65,127,131,144,121,119,672,138,890,	0,2157,2702,3165,3474,4255,4514,5560,6425,8017,10389,11860,13445,14057,
#Partially deleted in new
chrX	154762755	154777689	chrX:154762755-154777689	3	+	154762965	154776867	789624	15	226,68,87,92,185,65,127,131,144,121,119,104,79,138,891,	0,2143,2688,3151,3460,4241,4500,5546,6411,8003,10375,11846,12439,13431,14043,
#Partially deleted in new
chrX	154762851	154765355	chrX:154762851-154765355	0	+	154762851	154762851	8553170	2	130,457,	0,2047,
#Partially deleted in new
chrX	154762890	154769291	chrX:154762890-154769291	0	+	154762965	154769291	789624	9	91,68,87,92,185,65,127,11,125,	0,2008,2553,3016,3325,4106,4365,5411,6276,
#Partially deleted in new
chrX	154762912	154766555	chrX:154762912-154766555	0	+	154762912	154762912	8553170	5	69,68,87,92,340,	0,1986,2531,2994,3303,
#Partially deleted in new
chrX	154764924	154769210	chrX:154764924-154769210	0	+	154764924	154767359	789624	7	42,87,92,185,127,131,44,	0,519,982,1291,2331,3377,4242,
#Partially deleted in new
chrX	154764926	154768358	chrX:154764926-154768358	0	+	154764926	154768358	789624	7	40,87,92,185,65,127,90,	0,517,980,1289,2070,2329,3342,
#Partially deleted in new
chrX	154767015	154776260	chrX:154767015-154776260	0	+	154767015	154770814	789624	7	46,127,121,119,104,79,74,	0,240,3743,6115,7586,8179,9171,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	154768023	154770876	chrX:154768023-154770876	0	+	154768023	154768023	8553170	3	409,144,118,	0,1143,2735,
#Partially deleted in new
chrX	154768301	154776272	chrX:154768301-154776272	0	+	154768301	154774789	789624	8	131,144,121,119,104,59,79,86,	0,865,2457,4829,6300,6484,6893,7885,
#Deleted in new
chrX	154768527	154768659	chrX:154768527-154768659	3	+	154768527	154768527	789624	1	132,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	154768542	154776261	chrX:154768542-154776261	0	+	154768542	154768542	8553170	7	260,144,121,119,104,79,75,	0,624,2216,4588,6059,6652,7644,
#Deleted in new
chrX	154768595	154768656	chrX:154768595-154768656	3	+	154768595	154768595	5263520	1	61,	0,
#Partially deleted in new
chrX	154773143	154775314	chrX:154773143-154775314	0	+	154773143	154773143	8553170	2	106,713,	0,1458,
#Deleted in new
chrX	154774997	154775126	chrX:154774997-154775126	3	+	154774997	154774997	789624	1	129,	0,
#Deleted in new
chrX	154775118	154776911	chrX:154775118-154776911	0	+	154775118	154775118	8553170	3	155,138,113,	0,1068,1680,
#Partially deleted in new
chrX	154778683	154805521	chrX:154778683-154805521	3	-	154779176	154805373	0	12	670,75,203,81,81,107,197,69,86,79,144,250,	0,2555,2916,4743,5344,6367,7520,11270,12299,13085,13458,26588,
#Partially deleted in new
chrX	154778685	154805527	chrX:154778685-154805527	1	-	154779176	154799756	0	13	668,75,203,81,81,107,197,69,86,79,144,149,256,	0,2553,2914,4741,5342,6365,7518,11268,12297,13083,13456,21059,26586,
#Partially deleted in new
chrX	154778685	154783234	chrX:154778685-154783234	0	-	154778685	154778685	8553170	3	668,75,1635,	0,2553,2914,
#Partially deleted in new
chrX	154778722	154781596	chrX:154778722-154781596	0	-	154778722	154778722	8553170	2	631,358,	0,2516,
#Partially deleted in new
chrX	154778725	154805456	chrX:154778725-154805456	0	-	154804722	154805373	789624	13	628,75,203,81,81,107,197,69,86,79,144,131,185,	0,2513,2874,4701,5302,6325,7478,11228,12257,13043,13416,25971,26546,
#Partially deleted in new
chrX	154779152	154805397	chrX:154779152-154805397	1	-	154779176	154805373	0	12	201,75,203,81,81,107,137,69,86,79,144,126,	0,2086,2447,4274,4875,5898,7051,10801,11830,12616,12989,26119,
#Partially deleted in new
chrX	154781753	154805485	chrX:154781753-154805485	0	-	154781753	154805373	789624	6	49,81,81,107,197,214,	0,1673,2274,3297,4450,23518,
#Partially deleted in new
chrX	154782708	154805441	chrX:154782708-154805441	0	-	154782708	154782708	8553170	2	799,170,	0,22563,
#Partially deleted in new
chrX	154783376	154799815	chrX:154783376-154799815	0	-	154783376	154783376	8553170	5	131,81,107,197,71,	0,651,1674,2827,16368,
#Deleted in new
chrX	154783652	154786225	chrX:154783652-154786225	0	-	154783652	154783652	8553170	3	456,107,22,	0,1398,2551,
#Partially deleted in new
chrX	154784700	154805477	chrX:154784700-154805477	0	-	154784700	154784700	8553170	3	457,197,206,	0,1503,20571,
#Partially deleted in new
chrX	154785056	154805485	chrX:154785056-154805485	0	-	154785056	154805373	789624	4	101,197,69,214,	0,1147,4897,20215,
#Partially deleted in new
chrX	154785083	154791195	chrX:154785083-154791195	0	-	154785083	154785083	8553170	4	74,197,69,213,	0,1120,4870,5899,
#Partially deleted in new
chrX	154786213	154805527	chrX:154786213-154805527	0	-	154792266	154805373	789624	7	187,69,86,79,144,149,256,	0,3740,4769,5555,5928,13531,19058,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	154786365	154792422	chrX:154786365-154792422	0	-	154786365	154786365	8553170	5	35,69,86,79,281,	0,3588,4617,5403,5776,
#Partially deleted in new
chrX	154789988	154805498	chrX:154789988-154805498	0	-	154789988	154805373	789624	5	34,86,79,93,227,	0,994,1780,2204,15283,
#Partially deleted in new
chrX	154791630	154805468	chrX:154791630-154805468	0	-	154791630	154791630	8553170	3	217,144,197,	0,511,13641,
#Partially deleted in new
chrX	154817098	154817401	chrX:154817098-154817401	7	-	154817098	154817098	16724991	1	303,	0,
#Partially deleted in new
chrX	154823347	154832671	chrX:154823347-154832671	3	-	154823754	154830856	789624	4	435,130,241,98,	0,6187,7367,9226,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	154823627	154827458	chrX:154823627-154827458	0	-	154823627	154823627	8553170	2	155,67,	0,3764,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	154830572	154834662	chrX:154830572-154834662	0	-	154830572	154830572	8553170	3	383,110,100,	0,2001,3990,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	154835787	154886317	chrX:154835787-154886317	1	-	154837596	154886157	0	5	1965,177,149,145,184,	0,24644,25930,27295,50346,
#Boundary problem: need 26, got 0, diff 26, mapped 0.0
chrX	154835794	155022753	chrX:154835794-155022753	3	-	154837596	155022552	0	26	1958,177,149,145,156,86,72,117,183,229,213,154,3106,210,151,215,94,172,262,222,117,69,213,123,122,344,	0,24637,25923,27288,60282,64071,65576,66256,68111,68501,69016,70625,92776,111903,118097,121162,125280,130175,130631,133536,148892,151442,157141,161178,163684,186615,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	154836046	154884439	chrX:154836046-154884439	1	-	154837596	154882198	789624	6	1706,177,149,145,436,851,	0,24385,25671,27036,45990,47542,
#Deleted in new
chrX	154884971	154885558	chrX:154884971-154885558	3	+	154885049	154885397	789624	1	587,	0,
#Deleted in new
chrX	154886348	154888061	chrX:154886348-154888061	3	+	154886374	154887490	0	1	1713,	0,
#Deleted in new
chrX	154887359	154887458	chrX:154887359-154887458	3	-	154887359	154887359	5263520	1	99,	0,
#Deleted in new
chrX	154897560	154898092	chrX:154897560-154898092	7	-	154897560	154897560	16724991	1	532,	0,
#Partially deleted in new
chrX	154908884	154919103	chrX:154908884-154919103	7	-	154908884	154908884	16724991	2	810,321,	0,9898,
#Deleted in new
chrX	154919577	154920182	chrX:154919577-154920182	7	-	154919577	154919577	16724991	1	605,	0,
#Partially deleted in new
chrX	154930152	155022715	chrX:154930152-155022715	0	-	154999529	155022552	789624	14	1524,151,215,94,172,262,222,90,117,69,213,123,122,284,	0,23739,26804,30922,35817,36273,39178,47199,54534,57084,62783,66820,69326,92279,
#Deleted in new
chrX	154965771	154966516	chrX:154965771-154966516	0	-	154965771	154965771	8553170	2	370,91,	0,654,
#Partially deleted in new
chrX	154984700	155026940	chrX:154984700-155026940	0	-	154984700	155026817	789624	6	103,69,213,123,122,161,	0,2536,8235,12272,14778,42079,
#Partially deleted in new
chrX	154993024	155026868	chrX:154993024-155026868	0	-	154993024	155026817	789624	5	124,123,122,87,89,	0,3948,6454,29385,33755,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	155025979	155051732	chrX:155025979-155051732	0	+	155025979	155025979	8553170	5	172,70,151,76,63,	0,631,7423,20529,25690,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrX	155026684	155060303	chrX:155026684-155060303	3	+	155026938	155054672	789624	5	387,151,76,132,5709,	0,6718,19824,24985,27910,
#Partially deleted in new
chrX	155027152	155054681	chrX:155027152-155054681	0	+	155027152	155027152	8553170	5	220,151,76,132,87,	0,6250,19356,24517,27442,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	155032978	155054613	chrX:155032978-155054613	0	+	155032978	155032978	8553170	3	575,132,19,	0,18691,21616,
#Partially deleted in new
chrX	155033425	155055106	chrX:155033425-155055106	0	+	155033425	155051727	789624	5	128,76,23,132,512,	0,13083,13943,18244,21169,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrX	155047056	155054892	chrX:155047056-155054892	0	+	155047056	155047056	8553170	3	335,132,298,	0,4613,7538,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	155049093	155055571	chrX:155049093-155055571	0	+	155049093	155049093	8553170	2	2708,977,	0,5501,
#Partially deleted in new
chrX	155061621	155071362	chrX:155061621-155071362	3	-	155061842	155064023	0	3	370,68,669,	0,2344,9072,
#Partially deleted in new
chrX	155061621	155065519	chrX:155061621-155065519	0	-	155065489	155065519	789624	3	370,68,34,	0,2344,3864,
#Partially deleted in new
chrX	155061627	155065368	chrX:155061627-155065368	1	-	155061842	155064023	0	3	364,68,432,	0,2338,3309,
#Partially deleted in new
chrX	155064033	155071226	chrX:155064033-155071226	1	-	155065489	155066010	0	5	1366,52,171,152,533,	0,1452,1585,1872,6660,
#Partially deleted in new
chrX	155064927	155071136	chrX:155064927-155071136	0	-	155064927	155064927	8553170	4	472,52,171,443,	0,558,691,5766,
#Partially deleted in new
chrX	155065162	155147937	chrX:155065162-155147937	0	-	155065162	155065162	8553170	4	237,52,171,278,	0,323,456,82497,
#Partially deleted in new
chrX	155065320	155147775	chrX:155065320-155147775	3	-	155065489	155066010	0	5	79,52,171,152,116,	0,165,298,585,82339,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	155071419	155121318	chrX:155071419-155121318	1	+	155071527	155120150	789624	11	231,17,58,120,88,89,56,132,44,170,96,	0,907,1954,5750,7196,17843,19364,44637,45291,48579,49803,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	155071430	155122727	chrX:155071430-155122727	1	+	155071527	155120150	789624	11	220,17,55,120,88,89,56,132,44,170,1505,	0,896,1946,5739,7185,17832,19353,44626,45280,48568,49792,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	155071498	155123072	chrX:155071498-155123072	3	+	155071527	155120150	789624	10	152,17,55,120,88,89,56,44,170,1850,	0,828,1878,5671,7117,17764,19285,45212,48500,49724,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrX	155071502	155123074	chrX:155071502-155123074	1	+	155071527	155120150	789624	12	148,17,55,120,88,89,56,75,132,44,170,1852,	0,824,1874,5667,7113,17760,19281,27812,44554,45208,48496,49720,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrX	155071517	155116183	chrX:155071517-155116183	0	+	155071527	155116183	789624	7	133,120,88,89,56,75,127,	0,5652,7098,17745,19266,27797,44539,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrX	155071527	155120150	chrX:155071527-155120150	1	+	155071527	155120150	789624	11	123,17,55,114,94,89,56,75,132,44,155,	0,799,1849,5642,7082,17735,19256,27787,44529,45183,48468,
#Partially deleted in new
chrX	155071527	155120150	chrX:155071527-155120150	1	+	155071527	155120150	789624	10	123,17,58,114,94,89,56,132,44,155,	0,799,1846,5642,7082,17735,19256,44529,45183,48468,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	155071527	155120150	chrX:155071527-155120150	1	+	155071527	155120150	789624	10	131,64,114,94,89,56,75,132,44,155,	0,1840,5642,7082,17735,19256,27787,44529,45183,48468,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrX	155071531	155123036	chrX:155071531-155123036	0	+	155071531	155077245	789624	10	123,58,120,88,89,56,132,44,170,1814,	0,1842,5638,7084,17731,19252,44525,45179,48467,49691,
#Partially deleted in new
chrX	155073410	155078930	chrX:155073410-155078930	0	+	155073410	155078747	789624	3	21,120,315,	0,3759,5205,
#Partially deleted in new
chrX	155137110	155156503	chrX:155137110-155156503	7	+	155137110	155137110	16724991	8	64,143,76,119,62,127,107,57,	0,2108,4219,5278,5557,5723,6768,19336,
#Partially deleted in new
chrX	155197006	155239044	chrX:155197006-155239044	1	+	155208903	155238842	789624	7	133,108,125,67,99,139,273,	0,11867,23176,30228,31377,39222,41765,
#Partially deleted in new
chrX	155208903	155239810	chrX:155208903-155239810	1	+	155208903	155238842	789624	6	78,125,67,99,139,1039,	0,11279,18331,19480,27325,29868,
#Deleted in new
chrX	155212920	155213638	chrX:155212920-155213638	7	-	155212920	155212920	16724991	2	118,217,	0,501,
#Partially deleted in new
chrX	155216365	155239817	chrX:155216365-155239817	3	+	155216482	155238842	789624	6	210,125,67,99,139,1046,	0,3817,10869,12018,19863,22406,
#Partially deleted in new
chrX	155227143	155238961	chrX:155227143-155238961	0	+	155227143	155227143	8553170	4	158,99,139,190,	0,1240,9085,11628,
#Deleted in new
chrX	155258240	155264589	chrX:155258240-155264589	3	-	155260802	155264288	789624	2	2989,516,	0,5833,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	155276210	155334646	chrX:155276210-155334646	3	-	155277902	155334427	0	6	1854,182,107,126,110,276,	0,2938,3751,22574,22825,58160,
#Partially deleted in new
chrX	155279205	155334657	chrX:155279205-155334657	0	-	155279205	155334427	789624	4	125,107,110,287,	0,756,19830,55165,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrX	155279268	155334427	chrX:155279268-155334427	0	-	155279268	155279268	8553170	6	62,107,126,110,54,57,	0,693,19516,19767,30303,55102,
#Partially deleted in new
chrX	155290359	155291353	chrX:155290359-155291353	7	-	155290359	155290359	16724991	1	994,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	155292168	155293432	chrX:155292168-155293432	7	+	155292168	155292168	16724991	2	342,631,	0,633,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrX	155310246	155310490	chrX:155310246-155310490	7	+	155310246	155310246	16724991	1	244,	0,
#Partially deleted in new
chrX	155334857	155351926	chrX:155334857-155351926	3	-	155334857	155334857	8553170	2	392,67,	0,17002,
#Partially deleted in new
chrX	155347136	155351957	chrX:155347136-155351957	1	-	155347136	155347136	8553170	2	1231,98,	0,4723,
#Deleted in new
chrX	155348751	155349713	chrX:155348751-155349713	5	+	155348751	155348751	16724991	2	139,132,	0,830,
#Deleted in new
chrX	155348757	155349799	chrX:155348757-155349799	7	+	155348757	155348757	16724991	2	208,218,	0,824,
#Deleted in new
chrX	155380786	155381134	chrX:155380786-155381134	3	+	155380786	155381134	789624	1	348,	0,
#Deleted in new
chrX	155382114	155383230	chrX:155382114-155383230	3	+	155382114	155383230	0	1	1116,	0,
#Deleted in new
chrX	155383099	155383198	chrX:155383099-155383198	3	-	155383099	155383099	5263520	1	99,	0,
#Deleted in new
chrX	155456913	155458672	chrX:155456913-155458672	3	-	155457484	155458600	0	1	1759,	0,
#Deleted in new
chrX	155457516	155457615	chrX:155457516-155457615	3	+	155457516	155457516	5263520	1	99,	0,
#Deleted in new
chrX	155459414	155460005	chrX:155459414-155460005	3	-	155459579	155459927	789624	1	591,	0,
#Partially deleted in new
chrX	155466539	155494110	chrX:155466539-155494110	1	+	155466539	155466539	789624	4	310,63,98,1231,	0,7999,22752,26340,
#Partially deleted in new
chrX	155468285	155487046	chrX:155468285-155487046	3	+	155468285	155468285	8553170	2	89,464,	0,18297,
#Partially deleted in new
chrX	155489322	155611616	chrX:155489322-155611616	2	+	155489322	155489322	8553170	2	67,143,	0,122151,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrX	155490114	155612936	chrX:155490114-155612936	3	-	155491534	155545276	789624	8	1552,139,237,120,280,177,182,145,	0,2242,16783,21558,23871,34341,54981,122677,
#Deleted in new
chrX	155491448	155492489	chrX:155491448-155492489	0	-	155491448	155491448	8553170	2	218,208,	0,833,
#Partially deleted in new
chrX	155492534	155612877	chrX:155492534-155612877	1	-	155492564	155545276	789624	7	166,237,120,280,177,182,86,	0,14363,19138,21451,31921,52561,120257,
#Partially deleted in new
chrX	155524270	155545277	chrX:155524270-155545277	0	-	155524270	155524270	8553170	2	362,182,	0,20825,
#Partially deleted in new
chrX	155545166	155669944	chrX:155545166-155669944	0	-	155545166	155545166	8553170	2	111,187,	0,124591,
#Deleted in new
chrX	155612127	155612895	chrX:155612127-155612895	0	-	155612127	155612127	8553170	2	477,104,	0,664,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	155767811	155782459	chrX:155767811-155782459	3	+	155773871	155774738	789624	2	325,8694,	0,5954,
#Partially deleted in new
chrX	155828584	155829576	chrX:155828584-155829576	7	-	155828584	155828584	16724991	1	992,	0,
#Partially deleted in new
chrX	155875635	155875885	chrX:155875635-155875885	7	+	155875635	155875635	16724991	1	250,	0,
#Partially deleted in new
chrX	155881292	155943769	chrX:155881292-155943769	3	+	155889466	155941951	0	8	156,155,58,138,91,68,93,1887,	0,8165,14330,16819,19204,38520,58408,60590,
#Partially deleted in new
chrX	155881357	155941909	chrX:155881357-155941909	0	+	155881357	155881357	8553170	8	91,176,58,138,91,68,93,27,	0,8100,14265,16754,19139,38455,58343,60525,
#Partially deleted in new
chrX	155881359	155941944	chrX:155881359-155941944	0	+	155889466	155898145	789624	7	89,155,138,91,68,93,62,	0,8098,16752,19137,38453,58341,60523,
#Partially deleted in new
chrX	155881371	155939790	chrX:155881371-155939790	0	+	155881371	155881371	8553170	7	77,151,58,138,91,68,90,	0,8086,14251,16740,19125,38441,58329,
#Partially deleted in new
chrX	155881374	155943769	chrX:155881374-155943769	1	+	155889466	155942139	0	7	74,155,58,138,91,93,1887,	0,8083,14248,16737,19122,58326,60508,
#Partially deleted in new
chrX	155881377	155941989	chrX:155881377-155941989	1	+	155889466	155941951	0	7	71,90,138,91,68,93,107,	0,8080,16734,19119,38435,58323,60505,
#Deleted in new
chrX	155978991	155979325	chrX:155978991-155979325	7	-	155978991	155978991	16724991	1	334,	0,
#Partially deleted in new
chrX	155985369	155986249	chrX:155985369-155986249	7	-	155985369	155985369	16724991	1	880,	0,
#Partially deleted in new
chrX	155997580	156010608	chrX:155997580-156010608	3	+	155997759	156010409	789624	9	207,114,112,179,146,202,106,85,793,	0,5325,5868,6096,6839,7697,8502,9942,12235,
#Partially deleted in new
chrX	155997705	156010817	chrX:155997705-156010817	1	+	155997743	156009852	789624	9	82,101,138,112,172,117,202,106,1002,	0,3702,5176,5743,5978,6743,7572,8377,12110,
#Partially deleted in new
chrX	155997733	156002970	chrX:155997733-156002970	0	+	155997733	155997733	8553170	3	54,179,65,	0,3596,5172,
#Partially deleted in new
chrX	156004217	156022236	chrX:156004217-156022236	3	+	156004217	156004217	8553170	4	348,85,102,238,	0,3305,17473,17781,
#Deleted in new
chrX	156006113	156008046	chrX:156006113-156008046	0	+	156006113	156006113	8553170	3	75,85,148,	0,1409,1785,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrX	156014622	156016837	chrX:156014622-156016837	3	-	156014622	156014622	8553170	2	878,176,	0,2039,
#Deleted in new
chrX	156020825	156022415	chrX:156020825-156022415	5	+	156020825	156020825	16724991	5	323,58,99,147,93,	0,680,868,1173,1497,
#Deleted in new
chrX	156020960	156025374	chrX:156020960-156025374	5	+	156020960	156020960	16724991	10	188,112,147,137,136,202,159,153,69,134,	0,720,1038,1362,1738,2051,2341,3159,4071,4280,
#Deleted in new
chrX	156021327	156025663	chrX:156021327-156025663	6	+	156021327	156021327	16724991	2	1882,2362,	0,1974,
#Deleted in new
chrX	156021444	156023207	chrX:156021444-156023207	4	+	156021444	156021444	16724991	4	348,147,137,196,	0,554,878,1567,
#Deleted in new
chrX	156021676	156023335	chrX:156021676-156023335	4	+	156021676	156021676	16724991	6	116,147,146,136,202,34,	0,322,637,1022,1335,1625,
#Deleted in new
chrX	156021687	156025666	chrX:156021687-156025666	4	+	156021687	156021687	16724991	8	105,147,512,198,159,153,69,426,	0,311,635,1324,1614,2432,3344,3553,
#Deleted in new
chrX	156021687	156025710	chrX:156021687-156025710	5	+	156021687	156021687	16724991	8	105,147,521,202,159,153,69,470,	0,311,626,1324,1614,2432,3344,3553,
#Deleted in new
chrX	156021687	156025666	chrX:156021687-156025666	4	+	156021687	156021687	16724991	6	105,147,512,198,1799,426,	0,311,635,1324,1614,3553,
#Deleted in new
chrX	156021998	156023092	chrX:156021998-156023092	4	+	156021998	156021998	16724991	2	461,81,	0,1013,
#Deleted in new
chrX	156021998	156023389	chrX:156021998-156023389	4	+	156021998	156021998	16724991	5	147,217,136,198,88,	0,324,700,1013,1303,
#Deleted in new
chrX	156021998	156025663	chrX:156021998-156025663	4	+	156021998	156021998	16724991	5	147,137,136,198,2362,	0,324,700,1013,1303,
#Deleted in new
chrX	156022785	156023531	chrX:156022785-156023531	4	+	156022785	156022785	16724991	2	428,230,	0,516,
#Deleted in new
chrX	156023366	156025666	chrX:156023366-156025666	4	+	156023366	156023366	16724991	2	94,1547,	0,753,
#Deleted in new
chrX	156023823	156025554	chrX:156023823-156025554	4	+	156023823	156023823	16724991	3	449,69,314,	0,1208,1417,
#Deleted in new
chrX	156024070	156025554	chrX:156024070-156025554	4	+	156024070	156024070	16724991	3	202,18,314,	0,961,1170,
#Deleted in new
chrX	156025663	156027877	chrX:156025663-156027877	7	-	156025663	156025663	16724991	5	942,154,77,85,48,	0,1020,1342,1696,2166,
#Deleted in new
chrX_KI270880v1_alt	1652	2374	chrX_KI270880v1_alt:1652-2374	3	+	1652	1652	8553170	2	259,169,	0,553,
#Deleted in new
chrX_KI270880v1_alt	17158	70063	chrX_KI270880v1_alt:17158-70063	3	-	17562	70044	789624	13	555,107,119,176,90,49,157,87,75,103,104,186,343,	0,4641,4815,6779,7321,7897,11503,12161,12688,13221,13577,27599,52562,
#Deleted in new
chrX_KI270880v1_alt	17430	24884	chrX_KI270880v1_alt:17430-24884	0	-	17430	17430	8553170	5	283,107,119,176,405,	0,4369,4543,6507,7049,
#Deleted in new
chrX_KI270880v1_alt	17434	30470	chrX_KI270880v1_alt:17434-30470	0	-	17434	17434	8553170	8	4472,119,176,625,157,87,75,91,	0,4539,6503,7045,11227,11885,12412,12945,
#Deleted in new
chrX_KI270880v1_alt	21808	28775	chrX_KI270880v1_alt:21808-28775	0	-	21808	21808	8553170	5	284,176,90,49,114,	0,2129,2671,3247,6853,
#Deleted in new
chrX_KI270880v1_alt	23937	28772	chrX_KI270880v1_alt:23937-28772	0	-	23937	23937	8553170	4	176,90,355,111,	0,542,1118,4724,
#Deleted in new
chrX_KI270880v1_alt	25083	29660	chrX_KI270880v1_alt:25083-29660	0	-	25083	25083	8553170	3	21,157,341,	0,3578,4236,
#Deleted in new
chrX_KI270880v1_alt	28041	70308	chrX_KI270880v1_alt:28041-70308	0	-	28041	28041	8553170	8	777,87,75,103,104,186,78,588,	0,1278,1805,2338,2694,16716,17566,41679,
#Deleted in new
chrX_KI270880v1_alt	29782	44869	chrX_KI270880v1_alt:29782-44869	0	-	29782	29782	8553170	4	139,103,104,112,	0,597,953,14975,
#Deleted in new
chrX_KI270880v1_alt	29865	30984	chrX_KI270880v1_alt:29865-30984	0	-	29865	29865	8553170	3	56,103,249,	0,514,870,
#Deleted in new
chrX_KI270880v1_alt	30756	57397	chrX_KI270880v1_alt:30756-57397	0	-	30756	57124	789624	3	83,186,513,	0,14001,26128,
#Deleted in new
chrX_KI270880v1_alt	70332	88932	chrX_KI270880v1_alt:70332-88932	3	+	70332	70332	8553170	2	311,173,	0,18427,
#Deleted in new
chrX_KI270880v1_alt	71452	71742	chrX_KI270880v1_alt:71452-71742	3	-	71452	71452	8553170	1	290,	0,
#Deleted in new
chrX_KI270880v1_alt	102509	105333	chrX_KI270880v1_alt:102509-105333	3	+	102509	102509	8553170	2	206,309,	0,2515,
#Deleted in new
chrX_KI270880v1_alt	207127	207455	chrX_KI270880v1_alt:207127-207455	7	-	207127	207127	16724991	1	328,	0,
#Deleted in new
chrX_KI270880v1_alt	228588	228705	chrX_KI270880v1_alt:228588-228705	7	-	228588	228588	16724991	1	117,	0,
#Deleted in new
chrX_KI270881v1_alt	65313	82327	chrX_KI270881v1_alt:65313-82327	3	-	65971	74813	789624	9	1272,86,65,165,175,102,181,177,132,	0,3693,4449,4901,5992,7605,8529,9325,16882,
#Deleted in new
chrX_KI270881v1_alt	65313	74014	chrX_KI270881v1_alt:65313-74014	0	-	73799	74014	789624	7	1272,86,65,165,175,102,235,	0,3693,4449,4901,5992,7605,8466,
#Deleted in new
chrX_KI270881v1_alt	65313	74841	chrX_KI270881v1_alt:65313-74841	1	-	65971	74813	789624	8	1272,86,65,165,175,102,181,203,	0,3693,4449,4901,5992,7605,8529,9325,
#Deleted in new
chrX_KI270881v1_alt	65709	82327	chrX_KI270881v1_alt:65709-82327	0	-	72988	74813	789624	9	876,86,65,165,175,102,177,177,132,	0,3297,4053,4505,5596,7209,8137,8929,16486,
#Deleted in new
chrX_KI270881v1_alt	74428	82314	chrX_KI270881v1_alt:74428-82314	0	-	74428	74428	8553170	2	387,119,	0,7767,
#Deleted in new
chrX_KI270913v1_alt	6752	59203	chrX_KI270913v1_alt:6752-59203	3	-	7186	59184	789624	13	585,107,119,176,90,49,157,87,75,103,104,186,343,	0,4673,4847,6998,7501,8076,11276,11941,12468,12969,13325,27145,52108,
#Deleted in new
chrX_KI270913v1_alt	7054	14658	chrX_KI270913v1_alt:7054-14658	0	-	7054	7054	8553170	5	283,107,119,176,405,	0,4371,4545,6696,7199,
#Deleted in new
chrX_KI270913v1_alt	7058	19812	chrX_KI270913v1_alt:7058-19812	0	-	7058	7058	8553170	8	4474,119,176,624,157,87,75,91,	0,4541,6692,7195,10970,11635,12162,12663,
#Deleted in new
chrX_KI270913v1_alt	11434	18142	chrX_KI270913v1_alt:11434-18142	0	-	11434	11434	8553170	5	284,176,90,49,114,	0,2316,2819,3394,6594,
#Deleted in new
chrX_KI270913v1_alt	13750	18139	chrX_KI270913v1_alt:13750-18139	0	-	13750	13750	8553170	4	176,90,355,111,	0,503,1078,4278,
#Deleted in new
chrX_KI270913v1_alt	14856	19034	chrX_KI270913v1_alt:14856-19034	0	-	14856	14856	8553170	3	21,157,341,	0,3172,3837,
#Deleted in new
chrX_KI270913v1_alt	17408	59448	chrX_KI270913v1_alt:17408-59448	0	-	17408	17408	8553170	8	777,87,75,103,104,186,78,588,	0,1285,1812,2313,2669,16489,17339,41452,
#Deleted in new
chrX_KI270913v1_alt	19156	34009	chrX_KI270913v1_alt:19156-34009	0	-	19156	19156	8553170	4	139,103,104,112,	0,565,921,14741,
#Deleted in new
chrX_KI270913v1_alt	19239	20326	chrX_KI270913v1_alt:19239-20326	0	-	19239	19239	8553170	3	56,103,249,	0,482,838,
#Deleted in new
chrX_KI270913v1_alt	20098	46537	chrX_KI270913v1_alt:20098-46537	0	-	20098	46264	789624	3	83,186,513,	0,13799,25926,
#Deleted in new
chrX_KI270913v1_alt	59472	78072	chrX_KI270913v1_alt:59472-78072	3	+	59472	59472	8553170	2	311,173,	0,18427,
#Deleted in new
chrX_KI270913v1_alt	91649	94473	chrX_KI270913v1_alt:91649-94473	3	+	91649	91649	8553170	2	206,309,	0,2515,
#Deleted in new
chrX_KI270913v1_alt	196267	196595	chrX_KI270913v1_alt:196267-196595	7	-	196267	196267	16724991	1	328,	0,
#Deleted in new
chrX_KI270913v1_alt	217728	217845	chrX_KI270913v1_alt:217728-217845	7	-	217728	217728	16724991	1	117,	0,
#Partially deleted in new
chrY	253742	255091	chrY:253742-255091	7	+	253742	253742	16724991	2	104,155,	0,1194,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrY	276321	303353	chrY:276321-303353	3	+	284187	299335	789624	8	73,203,148,137,129,156,184,4257,	0,5160,7845,12411,14326,15177,16713,22775,
#Partially deleted in new
chrY	276323	291537	chrY:276323-291537	0	+	276323	276323	8553170	5	71,148,137,145,39,	0,7843,12409,14324,15175,
#Partially deleted in new
chrY	276352	291629	chrY:276352-291629	0	+	284187	291629	789624	5	42,148,137,129,131,	0,7814,12380,14295,15146,
#Partially deleted in new
chrY	281054	288869	chrY:281054-288869	0	+	284187	288869	789624	4	67,203,148,137,	0,427,3112,7678,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrY	281191	303356	chrY:281191-303356	1	+	284187	299335	789624	7	493,148,137,129,156,184,4260,	0,2975,7541,9456,10307,11843,17905,
#Partially deleted in new
chrY	281193	288787	chrY:281193-288787	0	+	284187	288787	789624	4	63,203,148,55,	0,288,2973,7539,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrY	281461	303353	chrY:281461-303353	1	+	284187	299335	789624	8	223,148,137,129,156,184,369,517,	0,2705,7271,9186,10037,11573,17635,21375,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	283162	288829	chrY:283162-288829	0	+	284187	288829	789624	3	39,148,97,	0,1004,5570,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrY	283478	291629	chrY:283478-291629	0	+	284187	291629	789624	5	42,148,137,129,131,	0,688,5254,7169,8020,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	283733	290757	chrY:283733-290757	0	+	284187	290757	789624	3	581,137,110,	0,4999,6914,
#Partially deleted in new
chrY	304528	312463	chrY:304528-312463	0	-	304528	304528	8553170	4	669,153,149,1045,	0,2831,3203,6890,
#Partially deleted in new
chrY	304749	318819	chrY:304749-318819	3	-	305073	318787	789624	10	448,153,149,209,159,68,131,71,138,381,	0,2610,2982,6669,8016,9400,10140,10479,12164,13689,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	320989	321851	chrY:320989-321851	3	+	320989	320989	8553170	2	259,169,	0,693,
#Partially deleted in new
chrY	333962	386710	chrY:333962-386710	3	-	334366	386691	0	13	555,107,119,176,90,49,157,87,75,103,104,186,343,	0,4641,4815,6802,7344,7920,11553,12211,12738,13271,13627,27442,52405,
#Partially deleted in new
chrY	334234	341711	chrY:334234-341711	0	-	334234	334234	8553170	5	283,107,119,176,405,	0,4369,4543,6530,7072,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrY	334238	347324	chrY:334238-347324	0	-	334238	334238	8553170	8	4472,119,176,625,157,87,75,91,	0,4539,6526,7068,11277,11935,12462,12995,
#Deleted in new
chrY	338612	345629	chrY:338612-345629	0	-	338612	338612	8553170	5	284,176,90,49,114,	0,2152,2694,3270,6903,
#Deleted in new
chrY	340764	345626	chrY:340764-345626	0	-	340764	340764	8553170	4	176,90,355,111,	0,542,1118,4751,
#Deleted in new
chrY	341910	346514	chrY:341910-346514	0	-	341910	341910	8553170	3	21,157,341,	0,3605,4263,
#Partially deleted in new
chrY	344895	386955	chrY:344895-386955	0	-	344895	344895	8553170	8	777,87,75,103,104,186,78,588,	0,1278,1805,2338,2694,16509,17359,41472,
#Partially deleted in new
chrY	346636	361516	chrY:346636-361516	0	-	346636	346636	8553170	4	139,103,104,112,	0,597,953,14768,
#Deleted in new
chrY	346719	347838	chrY:346719-347838	0	-	346719	346719	8553170	3	56,103,249,	0,514,870,
#Partially deleted in new
chrY	347610	374044	chrY:347610-374044	0	-	347610	373771	789624	3	83,186,513,	0,13794,25921,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	386979	405579	chrY:386979-405579	3	+	386979	386979	8553170	2	311,173,	0,18427,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	388099	388389	chrY:388099-388389	3	-	388099	388099	8553170	1	290,	0,
#Partially deleted in new
chrY	419156	421980	chrY:419156-421980	3	+	419156	419156	8553170	2	206,309,	0,2515,
#Deleted in new
chrY	523774	524102	chrY:523774-524102	7	-	523774	523774	16724991	1	328,	0,
#Deleted in new
chrY	545235	545352	chrY:545235-545352	7	-	545235	545235	16724991	1	117,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrY	624343	659411	chrY:624343-659411	1	+	630897	658829	789624	6	259,709,209,58,89,627,	0,6122,10274,16477,16655,34441,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrY	624343	646823	chrY:624343-646823	3	+	630897	644636	789624	6	259,709,209,58,89,2433,	0,6122,10274,16477,16655,20047,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrY	630806	659411	chrY:630806-659411	1	+	630897	658829	789624	5	368,209,58,89,627,	0,3811,10014,10192,27978,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	990220	994365	chrY:990220-994365	3	+	990220	990220	8553170	2	207,381,	0,3764,
#Partially deleted in new
chrY	1008502	1010101	chrY:1008502-1010101	7	-	1008502	1008502	16724991	3	49,289,392,	0,589,1207,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrY	1187548	1212637	chrY:1187548-1212637	3	-	1190896	1212634	0	9	26,664,85,121,163,134,167,103,82,	0,2948,5669,9231,11013,14853,18884,21257,25007,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrY	1190489	1212750	chrY:1190489-1212750	1	-	1190896	1212634	0	8	671,85,121,163,134,167,103,195,	0,2728,6290,8072,11912,15943,18316,22066,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrY	1190491	1212723	chrY:1190491-1212723	0	-	1198926	1212634	789624	8	669,85,121,345,134,167,100,168,	0,2726,6288,8309,11910,15941,18314,22064,
#Partially deleted in new
chrY	1190896	1212634	chrY:1190896-1212634	1	-	1190896	1206445	0	7	264,85,121,163,134,167,79,	0,2321,5883,7665,11505,15536,21659,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrY	1268799	1309922	chrY:1268799-1309922	1	+	1282703	1309479	0	13	80,64,102,143,124,130,173,134,30,136,97,82,521,	0,5955,13878,16978,19719,19959,21537,25528,26627,31691,35123,36646,40602,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chrY	1268799	1309935	chrY:1268799-1309935	1	+	1282703	1309479	0	14	80,88,102,143,124,130,173,134,30,136,102,97,82,534,	0,5955,13878,16978,19719,19959,21537,25528,26627,31691,34461,35123,36646,40602,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrY	1268799	1309935	chrY:1268799-1309935	1	+	1288814	1309479	0	11	80,102,124,130,173,134,30,136,97,82,534,	0,13878,19719,19959,21537,25528,26627,31691,35123,36646,40602,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrY	1268807	1310381	chrY:1268807-1310381	3	+	1282703	1309479	0	13	72,88,102,143,124,130,173,134,30,136,97,82,980,	0,5947,13870,16970,19711,19951,21529,25520,26619,31683,35115,36638,40594,
#Partially deleted in new
chrY	1268813	1300543	chrY:1268813-1300543	0	+	1268813	1268813	8553170	9	66,88,102,124,130,173,134,30,53,	0,5941,13864,19705,19945,21523,25514,26613,31677,
#Partially deleted in new
chrY	1268817	1294395	chrY:1268817-1294395	0	+	1282703	1294395	789624	7	62,102,143,124,130,173,68,	0,13860,16960,19701,19941,21519,25510,
#Boundary problem: need 14, got 0, diff 14, mapped 0.0
chrY	1268829	1309924	chrY:1268829-1309924	1	+	1282703	1309479	0	14	50,64,152,102,143,124,130,173,134,30,136,97,82,523,	0,5925,13579,13848,16948,19689,19929,21507,25498,26597,31661,35093,36616,40572,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrY	1268831	1305941	chrY:1268831-1305941	1	+	1282703	1305735	0	13	48,88,102,143,124,130,173,134,30,136,97,82,314,	0,5923,13846,16946,19687,19927,21505,25496,26595,31659,35091,36614,36796,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrY	1268831	1309922	chrY:1268831-1309922	1	+	1282703	1309868	789624	6	48,88,102,143,25,83,	0,5923,13846,16946,18342,41008,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	1268834	1282220	chrY:1268834-1282220	0	+	1268834	1268834	8553170	3	45,64,350,	0,5920,13036,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrY	1268844	1309934	chrY:1268844-1309934	1	+	1282703	1309589	0	11	35,88,102,143,124,130,173,134,30,136,533,	0,5910,13833,16933,19674,19914,21492,25483,26582,31646,40557,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrY	1268844	1309934	chrY:1268844-1309934	1	+	1282703	1305501	0	9	35,88,102,143,124,130,173,82,533,	0,5910,13833,16933,19674,19914,21492,36601,40557,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrY	1268844	1309934	chrY:1268844-1309934	0	+	1282703	1303970	789624	12	35,88,102,143,124,130,173,134,30,97,82,533,	0,5910,13833,16933,19674,19914,21492,25483,26582,35078,36601,40557,
#Boundary problem: need 10, got 0, diff 10, mapped 0.0
chrY	1282685	1309638	chrY:1282685-1309638	1	+	1282703	1305501	0	10	94,143,124,130,173,134,30,136,82,237,	0,3092,5833,6073,7651,11642,12741,17805,22760,26716,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	1285651	1288640	chrY:1285651-1288640	0	+	1285651	1285651	8553170	2	269,122,	0,2867,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	1288597	1289105	chrY:1288597-1289105	0	+	1288597	1288597	8553170	2	45,347,	0,161,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrY	1290452	1309922	chrY:1290452-1309922	0	+	1290452	1290452	8553170	6	57,134,30,136,20,99,	0,3875,4974,10038,12444,19371,
#Deleted in new
chrY	1293917	1293992	chrY:1293917-1293992	3	+	1293917	1293917	5263520	1	75,	0,
#Deleted in new
chrY	1294224	1295578	chrY:1294224-1295578	0	+	1294224	1294224	8553170	2	237,152,	0,1202,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrY	1294327	1309934	chrY:1294327-1309934	0	+	1294327	1294327	8553170	7	134,30,136,102,97,82,533,	0,1099,6163,8933,9595,11118,15074,
#Deleted in new
chrY	1300255	1300375	chrY:1300255-1300375	7	-	1300255	1300255	16724991	1	120,	0,
#Partially deleted in new
chrY	1336615	1382685	chrY:1336615-1382685	3	+	1341765	1382465	0	12	311,102,119,115,133,185,116,27,115,106,82,295,	0,5112,8700,11815,15484,15706,19605,22245,28522,42043,44407,45775,
#Partially deleted in new
chrY	1336615	1382689	chrY:1336615-1382689	1	+	1341765	1382465	0	10	311,102,133,185,116,27,115,106,82,299,	0,5112,15484,15706,19605,22245,28522,42043,44407,45775,
#Partially deleted in new
chrY	1336795	1356331	chrY:1336795-1356331	0	+	1341765	1356331	789624	5	131,102,133,185,111,	0,4932,15304,15526,19425,
#Partially deleted in new
chrY	1386151	1392724	chrY:1386151-1392724	3	-	1386601	1392009	789624	4	608,141,487,826,	0,1127,3089,5747,
#Partially deleted in new
chrY	1387310	1392103	chrY:1387310-1392103	0	-	1387310	1387310	8553170	4	109,487,99,205,	0,1930,2881,4588,
#Partially deleted in new
chrY	1387344	1392088	chrY:1387344-1392088	0	-	1387344	1387344	8553170	4	75,487,102,190,	0,1896,2847,4554,
#Partially deleted in new
chrY	1396426	1398958	chrY:1396426-1398958	3	+	1396426	1396426	8553170	2	222,134,	0,2398,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	1397024	1399402	chrY:1397024-1399402	1	+	1397024	1397024	789624	3	200,134,36,	0,1800,2342,
#Deleted in new
chrY	1401768	1403493	chrY:1401768-1403493	0	+	1401768	1401768	8553170	2	457,117,	0,1608,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	1401810	1413915	chrY:1401810-1413915	3	+	1401810	1401810	8553170	4	415,125,146,154,	0,1650,10932,11951,
#Partially deleted in new
chrY	1402042	1413131	chrY:1402042-1413131	0	+	1402042	1402042	8553170	3	183,125,389,	0,1418,10700,
#Partially deleted in new
chrY	1403138	1453762	chrY:1403138-1453762	1	-	1403268	1442236	0	13	351,123,144,133,185,163,388,109,62,65,48,132,145,	0,9593,14834,15843,18519,22386,24595,29130,31883,32555,35958,39047,50479,
#Partially deleted in new
chrY	1403140	1452873	chrY:1403140-1452873	3	-	1403268	1452840	0	13	349,123,144,133,185,163,388,109,62,65,48,132,126,	0,9591,14832,15841,18517,22384,24593,29128,31881,32553,35956,39045,49607,
#Partially deleted in new
chrY	1403140	1452929	chrY:1403140-1452929	1	-	1403268	1452840	0	12	349,123,144,133,185,163,388,109,62,65,132,182,	0,9591,14832,15841,18517,22384,24593,29128,31881,32553,39045,49607,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	1403458	1414028	chrY:1403458-1414028	0	+	1403458	1403458	8553170	3	127,146,280,	0,9284,10290,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	1403509	1414024	chrY:1403509-1414024	1	+	1403509	1403509	8553170	3	76,98,261,	0,9281,10254,
#Partially deleted in new
chrY	1427726	1435391	chrY:1427726-1435391	0	-	1427726	1427726	8553170	3	395,109,370,	0,4542,7295,
#Partially deleted in new
chrY	1431901	1435728	chrY:1431901-1435728	0	-	1431901	1431901	8553170	3	476,62,35,	0,3120,3792,
#Partially deleted in new
chrY	1441591	1452872	chrY:1441591-1452872	0	-	1441591	1441591	8553170	2	726,125,	0,11156,
#Duplicated in new
chrY	1462571	1537107	chrY:1462571-1537107	3	-	1465478	1466558	789624	2	4011,187,	0,74349,
#Partially deleted in new
chrY	1466436	1494353	chrY:1466436-1494353	0	-	1466436	1466558	789624	2	146,261,	0,27656,
#Partially deleted in new
chrY	1591592	1602514	chrY:1591592-1602514	3	+	1593462	1601594	789624	5	177,781,149,241,1856,	0,1851,3791,7599,9066,
#Partially deleted in new
chrY	1591622	1602502	chrY:1591622-1602502	0	+	1593462	1600143	789624	6	147,781,149,241,70,1844,	0,1821,3761,7569,8515,9036,
#Partially deleted in new
chrY	1591624	1600303	chrY:1591624-1600303	1	+	1593462	1599621	789624	4	145,781,149,1112,	0,1819,3759,7567,
#Partially deleted in new
chrY	1615163	1643027	chrY:1615163-1643027	1	+	1615199	1643014	0	8	105,175,130,69,119,141,123,225,	0,7975,9105,12539,14657,17986,21274,27639,
#Partially deleted in new
chrY	1615174	1643081	chrY:1615174-1643081	1	+	1615199	1643014	0	7	94,175,130,69,119,123,279,	0,7964,9094,12528,14646,21263,27628,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	1627745	1636463	chrY:1627745-1636463	0	+	1627745	1627745	8553170	2	288,222,	0,8496,
#Deleted in new
chrY	1636397	1643081	chrY:1636397-1643081	0	+	1636397	1643014	789624	2	163,279,	0,6405,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	1732583	1741988	chrY:1732583-1741988	1	+	1732583	1732583	8553170	3	140,247,58,	0,1366,9347,
#Partially deleted in new
chrY	1734116	1763212	chrY:1734116-1763212	3	+	1734116	1734116	8553170	3	80,302,254,	0,21567,28842,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	1767346	1768776	chrY:1767346-1768776	3	+	1767346	1767346	8553170	2	206,342,	0,1088,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrY	2219515	2500978	chrY:2219515-2500978	3	-	2221040	2500925	789624	7	1714,208,208,102,69,108,162,	0,23507,47224,71986,189229,205681,281301,
#Partially deleted in new
chrY	2243061	2500973	chrY:2243061-2500973	0	-	2243061	2500925	789624	5	169,208,102,108,157,	0,23678,48440,182135,257755,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	2261393	2266937	chrY:2261393-2266937	0	-	2261393	2261393	8553170	2	374,198,	0,5346,
#Partially deleted in new
chrY	2266769	2500650	chrY:2266769-2500650	0	-	2266769	2425212	789624	5	178,102,69,108,340,	0,24732,141975,158427,233541,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrY	2266853	2502805	chrY:2266853-2502805	0	-	2392466	2502767	789624	6	94,102,121,69,108,45,	0,24648,125500,141891,158343,235907,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrY	2291501	2500589	chrY:2291501-2500589	0	-	2392466	2500589	789624	5	102,121,69,108,279,	0,100852,117243,133695,208809,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	2334294	2336410	chrY:2334294-2336410	3	-	2334294	2334294	8553170	2	625,26,	0,2090,
#Partially deleted in new
chrY	2337830	2500960	chrY:2337830-2500960	0	-	2337830	2337830	8553170	4	169,69,108,144,	0,70914,87366,162986,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	2486413	2500967	chrY:2486413-2500967	1	-	2488634	2490719	0	2	4356,151,	0,14403,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	2486413	2500967	chrY:2486413-2500967	3	-	2488634	2490719	0	2	4359,151,	0,14403,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	2486981	2488971	chrY:2486981-2488971	0	-	2486981	2486981	8553170	2	721,184,	0,1806,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	2488185	2500555	chrY:2488185-2500555	1	-	2488634	2490719	0	2	2587,245,	0,12125,
#Partially deleted in new
chrY	2489904	2500895	chrY:2489904-2500895	0	-	2489904	2490719	789624	2	868,79,	0,10912,
#Deleted in new
chrY	2609190	2609254	chrY:2609190-2609254	3	+	2609190	2609190	5263520	1	64,	0,
#Partially deleted in new
chrY	2609347	2616171	chrY:2609347-2616171	5	+	2609347	2609347	16724991	4	134,43,69,356,	0,1648,2802,6468,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrY	2609391	2657229	chrY:2609391-2657229	7	+	2609391	2609391	16724991	9	90,43,69,154,45,69,69,46,2203,	0,1604,2758,6424,9348,10037,13993,17205,45635,
#Partially deleted in new
chrY	2609393	2638329	chrY:2609393-2638329	4	+	2609393	2609393	16724991	10	88,43,69,154,45,69,45,69,46,356,	0,1602,2756,6422,9346,10035,13296,13991,17203,28580,
#Partially deleted in new
chrY	2609414	2623453	chrY:2609414-2623453	5	+	2609414	2609414	16724991	8	67,43,69,154,45,69,45,69,	0,1581,2735,6401,9325,10014,13275,13970,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	2612987	2615347	chrY:2612987-2615347	3	-	2612987	2612987	789624	2	709,631,	0,1729,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrY	2616618	2638694	chrY:2616618-2638694	4	+	2616618	2616618	16724991	5	2166,69,69,46,721,	0,2810,6766,9978,21355,
#Partially deleted in new
chrY	2691132	2741309	chrY:2691132-2741309	3	+	2691360	2740804	789624	10	295,33,48,45,69,48,51,114,57,531,	0,23289,26472,28528,29223,31494,32181,35127,47067,49646,
#Partially deleted in new
chrY	2691186	2741300	chrY:2691186-2741300	1	+	2691360	2733364	789624	11	241,33,48,45,69,48,51,114,18,54,522,	0,23235,26418,28474,29169,31440,32127,35073,42170,47016,49592,
#Partially deleted in new
chrY	2691275	2741101	chrY:2691275-2741101	1	+	2691360	2740804	789624	9	152,33,45,69,48,51,114,57,323,	0,23146,28385,29080,31351,32038,34984,46924,49503,
#Partially deleted in new
chrY	2691279	2733667	chrY:2691279-2733667	1	+	2691360	2733364	789624	10	148,33,48,45,69,48,51,114,51,311,	0,23142,26325,28381,29076,31347,32034,34980,36013,42077,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	2691291	2718018	chrY:2691291-2718018	0	+	2691291	2691291	8553170	3	136,33,414,	0,23130,26313,
#Partially deleted in new
chrY	2691294	2723434	chrY:2691294-2723434	0	+	2691294	2691294	8553170	7	133,33,48,45,69,48,121,	0,23127,26310,28366,29061,31332,32019,
#Partially deleted in new
chrY	2691309	2733672	chrY:2691309-2733672	1	+	2691360	2733364	789624	9	118,33,48,45,69,48,51,114,316,	0,23112,26295,28351,29046,31317,32004,34950,42047,
#Partially deleted in new
chrY	2691312	2741290	chrY:2691312-2741290	1	+	2691360	2740804	789624	10	115,33,48,45,69,48,51,114,54,512,	0,23109,26292,28348,29043,31314,32001,34947,46890,49466,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	2691325	2715597	chrY:2691325-2715597	0	+	2691325	2691325	8553170	2	102,1176,	0,23096,
#Deleted in new
chrY	2691360	2692253	chrY:2691360-2692253	1	+	2691360	2691951	789624	2	67,466,	0,427,
#Partially deleted in new
chrY	2691360	2740804	chrY:2691360-2740804	0	+	2691360	2733364	789624	11	67,33,48,45,69,48,51,114,18,54,26,	0,23061,26244,28300,28995,31266,31953,34899,41996,46842,49418,
#Partially deleted in new
chrY	2691499	2726373	chrY:2691499-2726373	0	+	2691499	2691499	8553170	8	196,33,48,45,69,48,51,114,	0,22922,26105,28161,28856,31127,31814,34760,
#Partially deleted in new
chrY	2717373	2726363	chrY:2717373-2726363	0	+	2717373	2717373	8553170	7	101,48,45,69,48,51,104,	0,231,2287,2982,5253,5940,8886,
#Partially deleted in new
chrY	2719067	2726268	chrY:2719067-2726268	0	+	2719067	2719067	8553170	5	638,69,48,51,9,	0,1288,3559,4246,7192,
#Partially deleted in new
chrY	2726340	2741125	chrY:2726340-2741125	0	+	2726340	2737915	789624	3	33,376,347,	0,11540,14438,
#Deleted in new
chrY	2784748	2784853	chrY:2784748-2784853	3	+	2784748	2784748	8553170	1	105,	0,
#Deleted in new
chrY	2786854	2787699	chrY:2786854-2787699	3	-	2786988	2787603	0	1	845,	0,
#Deleted in new
chrY	2789826	2790328	chrY:2789826-2790328	7	+	2789826	2789826	16724991	1	502,	0,
#Deleted in new
chrY	2827981	2828218	chrY:2827981-2828218	7	+	2827981	2827981	16724991	1	237,	0,
#Partially deleted in new
chrY	2841485	2867268	chrY:2841485-2867268	3	+	2841624	2866894	0	7	142,78,181,98,172,158,476,	0,679,2591,4160,13114,23602,25307,
#Partially deleted in new
chrY	2841919	2866862	chrY:2841919-2866862	0	+	2841943	2866862	789624	7	54,78,181,98,172,158,70,	0,245,2157,3726,12680,23168,24873,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	2854095	2866956	chrY:2854095-2866956	0	+	2854095	2854095	8553170	3	676,158,164,	0,10992,12697,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	2854729	2932000	chrY:2854729-2932000	0	+	2854729	2854729	8553170	3	42,122,290,	0,74134,76981,
#Partially deleted in new
chrY	2881682	2883652	chrY:2881682-2883652	7	-	2881682	2881682	16724991	2	679,512,	0,1458,
#Partially deleted in new
chrY	2929000	2931120	chrY:2929000-2931120	7	-	2929000	2929000	16724991	3	42,997,50,	0,369,2070,
#Deleted in new
chrY	2934405	2934771	chrY:2934405-2934771	3	-	2934405	2934405	8553170	1	366,	0,
#Partially deleted in new
chrY	2935280	2982506	chrY:2935280-2982506	3	+	2953936	2979993	0	8	166,89,573,150,144,153,141,3697,	0,18628,25793,39814,40230,41389,42659,43529,
#Partially deleted in new
chrY	2935388	2980347	chrY:2935388-2980347	1	+	2953936	2979993	0	7	58,89,150,144,153,141,1538,	0,18520,39706,40122,41281,42551,43421,
#Partially deleted in new
chrY	2935476	2982505	chrY:2935476-2982505	1	+	2953936	2979993	0	8	293,89,573,150,144,153,141,3696,	0,18432,25597,39618,40034,41193,42463,43333,
#Partially deleted in new
chrY	2935499	2978053	chrY:2935499-2978053	0	+	2935499	2935499	8553170	4	270,150,144,114,	0,39595,40011,42440,
#Partially deleted in new
chrY	2935504	2961286	chrY:2935504-2961286	0	+	2953936	2961286	789624	3	265,89,213,	0,18404,25569,
#Partially deleted in new
chrY	2935650	2981146	chrY:2935650-2981146	1	+	2961090	2979993	0	6	119,573,150,144,141,2337,	0,25423,39444,39860,42289,43159,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	2966843	3002626	chrY:2966843-3002626	3	-	2966843	2966843	789624	3	96,90,314,	0,14994,35469,
#Deleted in new
chrY	2977818	2979350	chrY:2977818-2979350	0	+	2977818	2977818	8553170	2	262,541,	0,991,
#Partially deleted in new
chrY	2995066	2995273	chrY:2995066-2995273	7	-	2995066	2995066	16724991	1	207,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	3001627	3002571	chrY:3001627-3002571	1	-	3001627	3001627	8553170	3	296,89,34,	0,685,910,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	3002911	3097217	chrY:3002911-3097217	1	+	3002911	3002911	8553170	3	306,58,223,	0,76372,94083,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	3002997	3102272	chrY:3002997-3102272	3	+	3002997	3002997	789624	4	220,58,62,188,	0,76286,93997,99087,
#Deleted in new
chrY	3293807	3294826	chrY:3293807-3294826	7	+	3293807	3293807	16724991	1	1019,	0,
#Deleted in new
chrY	3549651	3549810	chrY:3549651-3549810	7	-	3549651	3549651	16724991	1	159,	0,
#Deleted in new
chrY	3579040	3580041	chrY:3579040-3580041	3	+	3579244	3579802	789624	2	87,818,	0,183,
#Deleted in new
chrY	3579114	3580041	chrY:3579114-3580041	1	+	3579244	3579802	789624	1	927,	0,
#Partially deleted in new
chrY	3682804	3683868	chrY:3682804-3683868	7	+	3682804	3682804	16724991	1	1064,	0,
#Partially deleted in new
chrY	3777996	3779546	chrY:3777996-3779546	7	-	3777996	3777996	16724991	1	1550,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	3851223	3852869	chrY:3851223-3852869	7	-	3851223	3851223	16724991	1	1646,	0,
#Partially deleted in new
chrY	3866305	3866722	chrY:3866305-3866722	7	-	3866305	3866305	16724991	1	417,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	4036496	4100320	chrY:4036496-4100320	3	+	4036496	4036496	8553170	2	224,335,	0,63489,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	4174984	4175090	chrY:4174984-4175090	3	-	4174984	4174984	8553170	1	106,	0,
#Partially deleted in new
chrY	4801684	4802848	chrY:4801684-4802848	7	-	4801684	4801684	16724991	1	1164,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	4993857	4997719	chrY:4993857-4997719	1	-	4993857	4993857	8553170	2	369,213,	0,3649,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	4994089	4999650	chrY:4994089-4999650	3	-	4994089	4994089	8553170	3	137,174,262,	0,3417,5299,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrY	5000225	5105444	chrY:5000225-5105444	1	+	5032696	5104361	789624	6	380,106,59,571,2493,1101,	0,31680,32444,56663,97989,104118,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrY	5000295	5105459	chrY:5000295-5105459	1	+	5032696	5104361	789624	7	310,169,106,59,571,2493,1116,	0,30603,31610,32374,56593,97919,104048,
#Partially deleted in new
chrY	5000389	5031947	chrY:5000389-5031947	0	+	5000389	5000389	8553170	3	216,71,42,	0,2298,31516,
#Partially deleted in new
chrY	5000399	5057088	chrY:5000399-5057088	0	+	5032696	5057088	789624	4	206,71,59,200,	0,2288,32270,56489,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	5019075	5019266	chrY:5019075-5019266	3	+	5019075	5019075	8553170	1	191,	0,
#Partially deleted in new
chrY	5056087	5101437	chrY:5056087-5101437	1	+	5056823	5100740	789624	2	1372,3223,	0,42127,
#Partially deleted in new
chrY	5056089	5104700	chrY:5056089-5104700	1	+	5056823	5104361	789624	3	1370,2493,357,	0,42125,48254,
#Partially deleted in new
chrY	5056089	5742224	chrY:5056089-5742224	3	+	5056823	5737942	789624	5	1370,2493,199,24,4953,	0,42125,444967,525685,681182,
#Partially deleted in new
chrY	5207214	5208069	chrY:5207214-5208069	7	-	5207214	5207214	16724991	1	855,	0,
#Partially deleted in new
chrY	5337744	5338964	chrY:5337744-5338964	7	-	5337744	5337744	16724991	1	1220,	0,
#Deleted in new
chrY	5573144	5574431	chrY:5573144-5574431	7	+	5573144	5573144	16724991	1	1287,	0,
#Deleted in new
chrY	5634479	5634655	chrY:5634479-5634655	7	-	5634479	5634479	16724991	1	176,	0,
#Partially deleted in new
chrY	5793299	5793737	chrY:5793299-5793737	7	-	5793299	5793299	16724991	1	438,	0,
#Deleted in new
chrY	5887503	5888740	chrY:5887503-5888740	7	+	5887503	5887503	16724991	1	1237,	0,
#Deleted in new
chrY	6158801	6159265	chrY:6158801-6159265	7	+	6158801	6158801	16724991	1	464,	0,
#Partially deleted in new
chrY	6242445	6243610	chrY:6242445-6243610	5	-	6242445	6242445	16724991	3	309,146,57,	0,849,1108,
#Partially deleted in new
chrY	6243294	6245283	chrY:6243294-6245283	7	-	6243294	6243294	16724991	3	146,91,312,	0,258,1677,
#Partially deleted in new
chrY	6246222	6249013	chrY:6246222-6249013	3	+	6246268	6248825	789624	6	532,78,112,146,82,211,	0,1133,1339,1552,1804,2580,
#Partially deleted in new
chrY	6246222	6248892	chrY:6246222-6248892	1	+	6246268	6248825	789624	7	133,138,78,112,146,82,90,	0,394,1133,1339,1552,1804,2580,
#Partially deleted in new
chrY	6246268	6249012	chrY:6246268-6249012	1	+	6246268	6248078	789624	6	486,78,112,146,93,210,	0,1087,1293,1506,1747,2534,
#Partially deleted in new
chrY	6246268	6249019	chrY:6246268-6249019	0	+	6246268	6246268	8553170	4	486,78,547,784,	0,1087,1293,1967,
#Partially deleted in new
chrY	6247622	6249004	chrY:6247622-6249004	0	+	6247622	6247622	8553170	3	298,82,202,	0,404,1180,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	6256266	6263953	chrY:6256266-6263953	7	-	6256266	6256266	16724991	3	2126,86,120,	0,5677,7567,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	6258332	6263935	chrY:6258332-6263935	4	-	6258332	6258332	16724991	4	60,159,146,102,	0,3611,5269,5501,
#Partially deleted in new
chrY	6262005	6263935	chrY:6262005-6263935	5	-	6262005	6262005	16724991	3	97,146,102,	0,1596,1828,
#Partially deleted in new
chrY	6266592	6269275	chrY:6266592-6269275	7	+	6266592	6266592	16724991	6	477,78,111,143,89,147,	0,1083,1289,1499,1749,2536,
#Partially deleted in new
chrY	6273578	6274065	chrY:6273578-6274065	7	-	6273578	6273578	16724991	3	83,145,64,	0,189,423,
#Deleted in new
chrY	6303956	6305074	chrY:6303956-6305074	7	-	6303956	6303956	16724991	2	33,476,	0,642,
#Deleted in new
chrY	6306041	6307920	chrY:6306041-6307920	7	+	6306041	6306041	16724991	4	330,78,116,23,	0,1381,1654,1856,
#Partially deleted in new
chrY	6328051	6343323	chrY:6328051-6343323	7	+	6328051	6328051	16724991	7	178,150,100,111,111,82,302,	0,10693,12843,13750,14258,14479,14970,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	6357218	6361413	chrY:6357218-6361413	3	-	6357218	6357218	789624	3	219,143,86,	0,1465,4109,
#Partially deleted in new
chrY	6390430	6411564	chrY:6390430-6411564	3	+	6390430	6390430	789624	5	245,160,109,138,258,	0,3669,10692,13157,20876,
#Partially deleted in new
chrY	6406243	6424145	chrY:6406243-6424145	3	-	6406243	6406243	789624	7	680,198,79,157,149,87,1818,	0,1903,2221,5130,5979,13521,16084,
#Partially deleted in new
chrY	6443433	6447077	chrY:6443433-6447077	3	+	6443433	6443433	789624	2	202,105,	0,3539,
#Partially deleted in new
chrY	6449467	6457906	chrY:6449467-6457906	3	+	6449467	6449467	789624	7	37,162,75,477,114,256,246,	0,978,3447,4210,6604,7691,8193,
#Partially deleted in new
chrY	6449467	6457906	chrY:6449467-6457906	0	+	6449467	6449467	8553170	6	37,162,75,477,114,246,	0,978,3447,4210,6604,8193,
#Partially deleted in new
chrY	6453904	6457906	chrY:6453904-6457906	0	+	6453904	6453904	8553170	3	250,213,246,	0,2068,3756,
#Partially deleted in new
chrY	6470772	6473630	chrY:6470772-6473630	3	-	6470772	6470772	8553170	3	177,205,136,	0,2040,2722,
#Partially deleted in new
chrY	6471030	6473630	chrY:6471030-6473630	1	-	6471030	6471030	789624	3	190,205,136,	0,1782,2464,
#Partially deleted in new
chrY	6492975	6496757	chrY:6492975-6496757	7	-	6492975	6492975	16724991	2	96,173,	0,3609,
#Deleted in new
chrY	6520462	6520929	chrY:6520462-6520929	7	+	6520462	6520462	16724991	1	467,	0,
#Partially deleted in new
chrY	6718961	6719180	chrY:6718961-6719180	7	-	6718961	6718961	16724991	1	219,	0,
#Deleted in new
chrY	6789152	6789344	chrY:6789152-6789344	7	+	6789152	6789152	16724991	1	192,	0,
#Deleted in new
chrY	6837706	6838252	chrY:6837706-6838252	7	+	6837706	6837706	16724991	1	546,	0,
#Partially deleted in new
chrY	6865917	6874027	chrY:6865917-6874027	3	-	6866072	6872608	789624	6	161,426,45,48,66,56,	0,2119,2814,4088,6637,8054,
#Partially deleted in new
chrY	6866072	6872608	chrY:6866072-6872608	1	-	6866072	6872608	789624	6	6,426,45,42,48,54,	0,1964,2659,2795,3933,6482,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	6900752	6901372	chrY:6900752-6901372	7	+	6900752	6900752	16724991	2	96,226,	0,394,
#Partially deleted in new
chrY	6910685	7091683	chrY:6910685-7091683	1	+	7025084	7091492	789624	18	297,85,31,89,108,146,253,133,142,64,98,61,122,75,128,166,102,212,	0,1402,67527,110763,114349,132294,153211,159510,160034,160874,161047,163874,170046,175212,175604,176581,179403,180786,
#Partially deleted in new
chrY	6910685	7091683	chrY:6910685-7091683	1	+	7025084	7091492	789624	18	297,85,95,89,108,146,253,133,142,64,98,61,122,75,128,166,102,212,	0,1402,85118,110763,114349,132294,153211,159510,160034,160874,161047,163874,170046,175212,175604,176581,179403,180786,
#Partially deleted in new
chrY	6910685	7091683	chrY:6910685-7091683	3	+	7025084	7091492	789624	19	297,85,31,95,89,108,146,253,133,142,64,98,61,122,75,128,166,102,212,	0,1402,67527,85118,110763,114349,132294,153211,159510,160034,160874,161047,163874,170046,175212,175604,176581,179403,180786,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	6918681	6920791	chrY:6918681-6920791	3	+	6918681	6918681	8553170	1	2110,	0,
#Partially deleted in new
chrY	7100732	7106502	chrY:7100732-7106502	7	-	7100732	7100732	16724991	2	95,110,	0,5660,
#Boundary problem: need 8, got 0, diff 8, mapped 0.0
chrY	7273971	7381548	chrY:7273971-7381548	7	+	7273971	7273971	16724991	8	507,169,264,120,96,78,147,5837,	0,29965,51934,67143,82163,93384,97771,101740,
#Partially deleted in new
chrY	7274312	7371868	chrY:7274312-7371868	5	+	7274312	7274312	16724991	7	166,169,264,120,96,78,126,	0,29624,51593,66802,81822,93043,97430,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	7324296	7324595	chrY:7324296-7324595	3	-	7324296	7324296	8553170	1	299,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	7326066	7328403	chrY:7326066-7328403	4	+	7326066	7326066	16724991	2	103,377,	0,1960,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	7333029	7356223	chrY:7333029-7356223	4	+	7333029	7333029	16724991	3	79,120,89,	0,8085,23105,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	7341530	7341642	chrY:7341530-7341642	3	+	7341530	7341530	8553170	1	112,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	7378671	7378779	chrY:7378671-7378779	3	+	7378671	7378671	8553170	1	108,	0,
#Deleted in new
chrY	7423053	7423158	chrY:7423053-7423158	3	-	7423053	7423053	8553170	1	105,	0,
#Deleted in new
chrY	7656967	7657352	chrY:7656967-7657352	7	+	7656967	7656967	16724991	1	385,	0,
#Partially deleted in new
chrY	7671742	7676024	chrY:7671742-7676024	7	-	7671742	7671742	16724991	5	300,89,111,106,114,	0,707,885,3623,4168,
#Deleted in new
chrY	7678898	7681028	chrY:7678898-7681028	7	+	7678898	7678898	16724991	5	312,66,93,145,46,	0,1368,1629,1821,2084,
#Deleted in new
chrY	7687738	7689548	chrY:7687738-7689548	7	-	7687738	7687738	16724991	5	65,146,111,74,472,	0,158,402,644,1338,
#Deleted in new
chrY	7690510	7692678	chrY:7690510-7692678	7	+	7690510	7690510	16724991	4	327,118,170,47,	0,1649,1853,2121,
#Partially deleted in new
chrY	7699356	7701247	chrY:7699356-7701247	3	-	7699356	7699356	5263520	2	131,61,	0,1830,
#Partially deleted in new
chrY	7712984	7776707	chrY:7712984-7776707	5	-	7712984	7712984	16724991	5	113,203,384,109,187,	0,8871,16472,36378,63536,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrY	7742594	7809261	chrY:7742594-7809261	7	-	7742594	7742594	16724991	5	433,187,195,110,108,	0,33926,34239,62900,66559,
#Deleted in new
chrY	7804923	7810683	chrY:7804923-7810683	3	+	7804923	7804923	5263520	2	156,823,	0,4937,
#Partially deleted in new
chrY	7845484	7846454	chrY:7845484-7846454	7	-	7845484	7845484	16724991	2	397,274,	0,696,
#Partially deleted in new
chrY	7853685	7854876	chrY:7853685-7854876	7	-	7853685	7853685	16724991	1	1191,	0,
#Partially deleted in new
chrY	7905535	7907303	chrY:7905535-7907303	7	-	7905535	7905535	16724991	2	523,190,	0,1578,
#Partially deleted in new
chrY	7913421	7914090	chrY:7913421-7914090	7	-	7913421	7913421	16724991	1	669,	0,
#Partially deleted in new
chrY	7932996	7937640	chrY:7932996-7937640	7	-	7932996	7932996	16724991	4	19,106,70,70,	0,697,3638,4574,
#Partially deleted in new
chrY	7990986	7991806	chrY:7990986-7991806	7	-	7990986	7990986	16724991	1	820,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	8068895	8070723	chrY:8068895-8070723	7	-	8068895	8068895	16724991	2	1223,122,	0,1706,
#Partially deleted in new
chrY	8127129	8144203	chrY:8127129-8144203	7	+	8127129	8127129	16724991	9	109,3,178,116,37,113,107,94,302,	0,2103,4518,6555,6996,15096,16078,16264,16772,
#Partially deleted in new
chrY	8264448	8277188	chrY:8264448-8277188	7	-	8264448	8264448	16724991	7	317,88,111,115,150,103,108,	0,726,885,1866,6831,12105,12632,
#Deleted in new
chrY	8280197	8282209	chrY:8280197-8282209	7	+	8280197	8280197	16724991	4	138,110,146,49,	0,1503,1699,1963,
#Deleted in new
chrY	8350930	8352143	chrY:8350930-8352143	7	+	8350930	8350930	16724991	1	1213,	0,
#Deleted in new
chrY	8363535	8363959	chrY:8363535-8363959	7	-	8363535	8363535	16724991	1	424,	0,
#Deleted in new
chrY	8364031	8365150	chrY:8364031-8365150	7	+	8364031	8364031	16724991	1	1119,	0,
#Deleted in new
chrY	8371662	8372030	chrY:8371662-8372030	7	+	8371662	8371662	16724991	1	368,	0,
#Deleted in new
chrY	8372240	8372710	chrY:8372240-8372710	7	+	8372240	8372240	16724991	1	470,	0,
#Partially deleted in new
chrY	8413036	8414054	chrY:8413036-8414054	7	-	8413036	8413036	16724991	2	418,255,	0,763,
#Deleted in new
chrY	8418790	8419900	chrY:8418790-8419900	7	-	8418790	8418790	16724991	1	1110,	0,
#Deleted in new
chrY	8517363	8517748	chrY:8517363-8517748	7	-	8517363	8517363	16724991	1	385,	0,
#Deleted in new
chrY	8638293	8644842	chrY:8638293-8644842	3	+	8638293	8638293	8553170	3	113,196,164,	0,5838,6385,
#Deleted in new
chrY	8683369	8683878	chrY:8683369-8683878	3	-	8683369	8683369	5263520	2	63,158,	0,351,
#Deleted in new
chrY	8704471	8705283	chrY:8704471-8705283	3	+	8704471	8704471	5263520	2	88,181,	0,631,
#Partially deleted in new
chrY	8783309	8817382	chrY:8783309-8817382	3	-	8783309	8783309	5263520	5	97,316,303,84,37,	0,578,5690,11551,34036,
#Deleted in new
chrY	8901202	8903276	chrY:8901202-8903276	7	-	8901202	8901202	16724991	4	56,144,139,286,	0,167,398,1788,
#Partially deleted in new
chrY	8906223	8916073	chrY:8906223-8916073	7	+	8906223	8906223	16724991	8	109,104,178,153,112,111,89,303,	0,870,3659,5722,7869,8860,9052,9547,
#Partially deleted in new
chrY	8909947	8914155	chrY:8909947-8914155	4	+	8909947	8909947	16724991	3	113,153,63,	0,1998,4145,
#Deleted in new
chrY	8931068	8931454	chrY:8931068-8931454	7	-	8931068	8931068	16724991	1	386,	0,
#Partially deleted in new
chrY	8971750	8974095	chrY:8971750-8974095	7	-	8971750	8971750	16724991	3	144,45,369,	0,236,1976,
#Partially deleted in new
chrY	9030593	9039988	chrY:9030593-9039988	7	+	9030593	9030593	16724991	6	137,175,116,74,92,189,	0,461,4079,5863,7082,9206,
#Deleted in new
chrY	9166084	9167702	chrY:9166084-9167702	7	-	9166084	9166084	16724991	1	1618,	0,
#Partially deleted in new
chrY	9183693	9185803	chrY:9183693-9185803	7	+	9183693	9183693	16724991	2	92,202,	0,1908,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrY	9189628	9204611	chrY:9189628-9204611	7	-	9189628	9189628	16724991	6	124,885,124,190,207,215,	0,559,3963,9463,11765,14768,
#Deleted in new
chrY	9230914	9231247	chrY:9230914-9231247	7	+	9230914	9230914	16724991	1	333,	0,
#Partially deleted in new
chrY	9311129	9322869	chrY:9311129-9322869	7	-	9311129	9311129	16724991	10	302,111,111,110,111,115,153,178,104,109,	0,886,1495,2043,2580,3646,5809,7862,11055,11631,
#Deleted in new
chrY	9325798	9326047	chrY:9325798-9326047	7	+	9325798	9325798	16724991	1	249,	0,
#Partially deleted in new
chrY	9329879	9334832	chrY:9329879-9334832	3	-	9329879	9329879	5263520	2	177,82,	0,4871,
#Deleted in new
chrY	9337463	9340278	chrY:9337463-9340278	3	+	9337509	9340090	789624	6	550,78,112,146,82,211,	0,1157,1363,1576,1828,2604,
#Deleted in new
chrY	9337509	9340277	chrY:9337509-9340277	1	+	9337509	9339343	789624	6	504,78,112,146,93,210,	0,1111,1317,1530,1771,2558,
#Deleted in new
chrY	9337509	9340284	chrY:9337509-9340284	0	+	9337509	9337509	8553170	4	504,78,547,784,	0,1111,1317,1991,
#Deleted in new
chrY	9337509	9339393	chrY:9337509-9339393	1	+	9337509	9339393	789624	6	87,138,78,112,146,102,	0,366,1111,1317,1530,1782,
#Deleted in new
chrY	9338887	9340269	chrY:9338887-9340269	0	+	9338887	9338887	8553170	3	298,93,202,	0,393,1180,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	9347510	9355401	chrY:9347510-9355401	7	-	9347510	9347510	16724991	4	2129,86,110,15,	0,5679,7570,7876,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	9349578	9355182	chrY:9349578-9355182	4	-	9349578	9349578	16724991	4	61,159,146,102,	0,3611,5270,5502,
#Deleted in new
chrY	9354845	9356814	chrY:9354845-9356814	5	-	9354845	9354845	16724991	3	149,110,301,	0,235,1668,
#Deleted in new
chrY	9357796	9360593	chrY:9357796-9360593	3	+	9357842	9360405	789624	6	532,78,112,146,82,211,	0,1139,1345,1558,1810,2586,
#Deleted in new
chrY	9357842	9360592	chrY:9357842-9360592	1	+	9357842	9359658	789624	6	486,78,112,146,93,210,	0,1093,1299,1512,1753,2540,
#Deleted in new
chrY	9357842	9359374	chrY:9357842-9359374	1	+	9357842	9359374	789624	5	87,138,78,112,20,	0,348,1093,1299,1512,
#Deleted in new
chrY	9357842	9360599	chrY:9357842-9360599	0	+	9357842	9357842	8553170	4	486,78,547,784,	0,1093,1299,1973,
#Deleted in new
chrY	9359202	9360584	chrY:9359202-9360584	0	+	9359202	9359202	8553170	3	298,82,202,	0,404,1180,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	9367802	9375681	chrY:9367802-9375681	7	-	9367802	9367802	16724991	4	2114,86,110,15,	0,5663,7558,7864,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	9369856	9375462	chrY:9369856-9375462	4	-	9369856	9369856	16724991	4	60,159,146,102,	0,3609,5272,5504,
#Deleted in new
chrY	9374968	9377092	chrY:9374968-9377092	5	-	9374968	9374968	16724991	8	42,146,110,65,46,32,33,292,	0,160,392,698,916,1174,1391,1832,
#Deleted in new
chrY	9378121	9380871	chrY:9378121-9380871	7	+	9378121	9378121	16724991	6	485,78,112,146,82,211,	0,1092,1298,1511,1763,2539,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	9388121	9396027	chrY:9388121-9396027	5	-	9388121	9388121	16724991	4	2129,86,110,15,	0,5684,7585,7891,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	9390190	9395808	chrY:9390190-9395808	4	-	9390190	9390190	16724991	4	60,159,146,102,	0,3615,5284,5516,
#Deleted in new
chrY	9395314	9397438	chrY:9395314-9397438	7	-	9395314	9395314	16724991	8	42,146,110,65,46,32,33,292,	0,160,392,698,916,1174,1391,1832,
#Deleted in new
chrY	9398420	9401217	chrY:9398420-9401217	3	+	9398466	9401029	789624	6	532,78,112,146,82,211,	0,1139,1345,1558,1810,2586,
#Deleted in new
chrY	9398466	9401216	chrY:9398466-9401216	1	+	9398466	9400282	789624	6	486,78,112,146,93,210,	0,1093,1299,1512,1753,2540,
#Deleted in new
chrY	9398466	9399876	chrY:9398466-9399876	1	+	9398466	9399876	789624	4	87,138,78,111,	0,348,1093,1299,
#Deleted in new
chrY	9398466	9401223	chrY:9398466-9401223	0	+	9398466	9398466	8553170	4	486,78,547,784,	0,1093,1299,1973,
#Deleted in new
chrY	9399826	9401208	chrY:9399826-9401208	0	+	9399826	9399826	8553170	3	298,93,202,	0,393,1180,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	9458612	9464357	chrY:9458612-9464357	0	-	9458612	9458612	8553170	3	190,86,114,	0,3745,5631,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	9458742	9464345	chrY:9458742-9464345	3	-	9458742	9458742	789624	4	60,159,146,102,	0,3615,5269,5501,
#Deleted in new
chrY	9463851	9465974	chrY:9463851-9465974	1	-	9463851	9463851	8553170	9	42,146,73,36,65,46,32,33,292,	0,160,392,466,698,916,1173,1390,1831,
#Deleted in new
chrY	9466954	9469748	chrY:9466954-9469748	1	+	9467000	9468816	789624	6	532,78,112,146,93,210,	0,1139,1345,1558,1799,2584,
#Deleted in new
chrY	9466954	9469748	chrY:9466954-9469748	3	+	9467000	9469561	789624	6	532,78,112,146,82,210,	0,1139,1345,1558,1810,2584,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	9479052	9484654	chrY:9479052-9484654	5	-	9479052	9479052	16724991	4	60,159,146,102,	0,3611,5268,5500,
#Deleted in new
chrY	9484320	9486239	chrY:9484320-9486239	7	-	9484320	9484320	16724991	5	146,110,65,52,235,	0,232,533,779,1684,
#Deleted in new
chrY	9487312	9489893	chrY:9487312-9489893	7	+	9487312	9487312	16724991	6	504,78,112,146,82,23,	0,1111,1317,1530,1782,2558,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	9497286	9505159	chrY:9497286-9505159	7	-	9497286	9497286	16724991	4	2114,86,110,15,	0,5664,7553,7858,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	9499340	9504941	chrY:9499340-9504941	4	-	9499340	9499340	16724991	4	60,159,146,102,	0,3610,5267,5499,
#Deleted in new
chrY	9504399	9506566	chrY:9504399-9506566	5	-	9504399	9504399	16724991	5	90,146,110,77,294,	0,208,440,745,1873,
#Deleted in new
chrY	9507595	9510175	chrY:9507595-9510175	7	+	9507595	9507595	16724991	7	219,266,78,112,146,82,23,	0,237,1110,1316,1529,1781,2557,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	9517598	9525487	chrY:9517598-9525487	7	-	9517598	9517598	16724991	4	2127,86,110,15,	0,5677,7568,7874,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	9519665	9525268	chrY:9519665-9525268	4	-	9519665	9519665	16724991	4	60,159,146,102,	0,3610,5269,5501,
#Deleted in new
chrY	9524774	9526897	chrY:9524774-9526897	5	-	9524774	9524774	16724991	7	42,146,110,130,27,20,301,	0,160,392,698,894,1403,1822,
#Deleted in new
chrY	9527879	9530676	chrY:9527879-9530676	3	+	9527925	9530488	789624	6	532,78,112,146,82,211,	0,1139,1345,1558,1810,2586,
#Deleted in new
chrY	9527925	9530675	chrY:9527925-9530675	1	+	9527925	9529741	789624	6	486,78,112,146,93,210,	0,1093,1299,1512,1753,2540,
#Deleted in new
chrY	9527925	9530682	chrY:9527925-9530682	0	+	9527925	9527925	8553170	4	486,78,547,784,	0,1093,1299,1973,
#Deleted in new
chrY	9529285	9530667	chrY:9529285-9530667	0	+	9529285	9529285	8553170	3	298,82,202,	0,404,1180,
#Deleted in new
chrY	9544916	9547147	chrY:9544916-9547147	7	-	9544916	9544916	16724991	5	90,146,110,62,356,	0,208,440,746,1875,
#Deleted in new
chrY	9548107	9550681	chrY:9548107-9550681	7	+	9548107	9548107	16724991	6	473,78,112,145,93,22,	0,1080,1286,1499,1739,2552,
#Partially deleted in new
chrY	9610570	9621276	chrY:9610570-9621276	7	-	9610570	9610570	16724991	8	301,84,111,114,147,175,104,109,	0,713,882,1850,4519,6582,10056,10597,
#Deleted in new
chrY	9624182	9626352	chrY:9624182-9626352	7	+	9624182	9624182	16724991	5	363,87,113,141,41,	0,1387,1679,1878,2129,
#Partially deleted in new
chrY	9640248	9640716	chrY:9640248-9640716	7	-	9640248	9640248	16724991	1	468,	0,
#Partially deleted in new
chrY	9665228	9669010	chrY:9665228-9669010	7	+	9665228	9665228	16724991	2	173,88,	0,3694,
#Partially deleted in new
chrY	9691099	9693699	chrY:9691099-9693699	1	+	9691099	9691099	5263520	3	136,205,190,	0,613,2410,
#Partially deleted in new
chrY	9691099	9693957	chrY:9691099-9693957	3	+	9691099	9691099	8553170	3	136,205,177,	0,613,2681,
#Partially deleted in new
chrY	9706823	9715262	chrY:9706823-9715262	3	-	9706823	9706823	8553170	7	246,256,114,477,75,162,37,	0,492,1721,3752,4917,7299,8402,
#Partially deleted in new
chrY	9706823	9715262	chrY:9706823-9715262	0	-	9706823	9706823	789624	6	246,114,477,75,162,37,	0,1721,3752,4917,7299,8402,
#Partially deleted in new
chrY	9706823	9710825	chrY:9706823-9710825	0	-	9706823	9706823	8553170	3	246,213,250,	0,1721,3752,
#Partially deleted in new
chrY	9717652	9721296	chrY:9717652-9721296	3	-	9717652	9717652	5263520	2	105,202,	0,3442,
#Partially deleted in new
chrY	9740583	9758476	chrY:9740583-9758476	3	+	9740583	9740583	789624	7	1818,87,149,157,79,198,680,	0,4294,11765,12606,15593,15792,17213,
#Partially deleted in new
chrY	9753155	9774289	chrY:9753155-9774289	3	-	9753155	9753155	789624	5	258,138,109,160,245,	0,7839,10333,17305,20889,
#Deleted in new
chrY	9801152	9813245	chrY:9801152-9813245	3	+	9801152	9801152	5263520	5	155,112,75,39,46,	0,3621,8158,8918,12047,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	9813314	9817513	chrY:9813314-9817513	3	+	9813314	9813314	8553170	3	86,143,219,	0,2587,3980,
#Partially deleted in new
chrY	9831417	9846696	chrY:9831417-9846696	7	-	9831417	9831417	16724991	7	302,76,111,111,100,150,178,	0,717,903,1411,2329,4429,15101,
#Partially deleted in new
chrY	9868461	9868702	chrY:9868461-9868702	7	-	9868461	9868461	16724991	1	241,	0,
#Partially deleted in new
chrY	9869663	9870781	chrY:9869663-9870781	7	+	9869663	9869663	16724991	2	476,33,	0,1085,
#Partially deleted in new
chrY	9905594	9908139	chrY:9905594-9908139	7	-	9905594	9905594	16724991	6	20,85,143,111,78,477,	0,709,903,1145,1384,2068,
#Partially deleted in new
chrY	9910797	9911962	chrY:9910797-9911962	3	+	9910797	9910797	5263520	3	57,146,309,	0,170,856,
#Partially deleted in new
chrY	9951552	9959423	chrY:9951552-9959423	7	+	9951552	9951552	16724991	6	109,76,113,111,89,312,	0,570,5887,6866,7057,7559,
#Partially deleted in new
chrY	10022488	10034187	chrY:10022488-10034187	7	-	10022488	10022488	16724991	8	301,89,111,115,152,178,101,100,	0,706,881,1868,4021,7900,11066,11599,
#Partially deleted in new
chrY	10036194	10038375	chrY:10036194-10038375	7	+	10036194	10036194	16724991	4	358,69,146,57,	0,1704,1868,2124,
#Partially deleted in new
chrY	10066553	10067386	chrY:10066553-10067386	5	-	10066553	10066553	16724991	2	56,86,	0,747,
#Partially deleted in new
chrY	10066586	10069151	chrY:10066586-10069151	7	-	10066586	10066586	16724991	6	23,82,146,112,78,495,	0,714,902,1145,1385,2070,
#Partially deleted in new
chrY	10070130	10070409	chrY:10070130-10070409	7	+	10070130	10070130	16724991	1	279,	0,
#Partially deleted in new
chrY	10088025	10089586	chrY:10088025-10089586	7	+	10088025	10088025	16724991	2	106,421,	0,1140,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	10090409	10090528	chrY:10090409-10090528	7	-	10090409	10090409	16724991	1	119,	0,
#Partially deleted in new
chrY	10090801	10091207	chrY:10090801-10091207	7	+	10090801	10090801	16724991	1	406,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	10092874	10092993	chrY:10092874-10092993	7	-	10092874	10092874	16724991	1	119,	0,
#Partially deleted in new
chrY	10169787	10170314	chrY:10169787-10170314	7	-	10169787	10169787	16724991	1	527,	0,
#Partially deleted in new
chrY	10171589	10172725	chrY:10171589-10172725	7	-	10171589	10171589	16724991	1	1136,	0,
#Partially deleted in new
chrY	10173852	10174207	chrY:10173852-10174207	7	+	10173852	10173852	16724991	1	355,	0,
#Partially deleted in new
chrY	10190376	10192298	chrY:10190376-10192298	7	-	10190376	10190376	16724991	1	1922,	0,
#Partially deleted in new
chrY	10200154	10200306	chrY:10200154-10200306	7	+	10200154	10200154	16724991	1	152,	0,
#Deleted in new
chrY	11042721	11042943	chrY:11042721-11042943	7	-	11042721	11042721	16724991	1	222,	0,
#Deleted in new
chrY	11085475	11086061	chrY:11085475-11086061	7	-	11085475	11085475	16724991	1	586,	0,
#Deleted in new
chrY	11107064	11107263	chrY:11107064-11107263	7	-	11107064	11107064	16724991	1	199,	0,
#Deleted in new
chrY	11107388	11107596	chrY:11107388-11107596	7	-	11107388	11107388	16724991	1	208,	0,
#Deleted in new
chrY	11107718	11107887	chrY:11107718-11107887	7	-	11107718	11107718	16724991	1	169,	0,
#Deleted in new
chrY	11144249	11144492	chrY:11144249-11144492	7	+	11144249	11144249	16724991	1	243,	0,
#Deleted in new
chrY	11153857	11159013	chrY:11153857-11159013	7	-	11153857	11153857	16724991	6	213,159,225,121,70,477,	0,1024,1796,2710,3196,4679,
#Deleted in new
chrY	11173617	11173821	chrY:11173617-11173821	7	+	11173617	11173617	16724991	1	204,	0,
#Deleted in new
chrY	11178305	11178816	chrY:11178305-11178816	7	+	11178305	11178305	16724991	1	511,	0,
#Deleted in new
chrY	11306917	11308181	chrY:11306917-11308181	7	+	11306917	11306917	16724991	1	1264,	0,
#Deleted in new
chrY	11314920	11316187	chrY:11314920-11316187	7	+	11314920	11314920	16724991	1	1267,	0,
#Deleted in new
chrY	11321556	11322823	chrY:11321556-11322823	7	+	11321556	11321556	16724991	1	1267,	0,
#Deleted in new
chrY	11332328	11333595	chrY:11332328-11333595	7	+	11332328	11332328	16724991	1	1267,	0,
#Partially deleted in new
chrY	11335626	11337693	chrY:11335626-11337693	7	+	11335626	11335626	16724991	2	169,1507,	0,560,
#Partially deleted in new
chrY	11340578	11385687	chrY:11340578-11385687	7	-	11340578	11340578	16724991	9	216,137,109,150,107,176,128,143,171,	0,4389,5413,9306,10298,28288,41049,42291,44938,
#Deleted in new
chrY	11395698	11397076	chrY:11395698-11397076	7	+	11395698	11395698	16724991	2	41,1206,	0,172,
#Partially deleted in new
chrY	11412547	11418716	chrY:11412547-11418716	7	+	11412547	11412547	16724991	3	86,81,87,	0,4849,6082,
#Deleted in new
chrY	11445417	11445564	chrY:11445417-11445564	7	-	11445417	11445417	16724991	1	147,	0,
#Deleted in new
chrY	11445707	11446101	chrY:11445707-11446101	7	-	11445707	11445707	16724991	1	394,	0,
#Deleted in new
chrY	11473726	11474237	chrY:11473726-11474237	7	-	11473726	11473726	16724991	2	331,58,	0,453,
#Partially deleted in new
chrY	11781051	11782527	chrY:11781051-11782527	7	-	11781051	11781051	16724991	1	1476,	0,
#Deleted in new
chrY	11922535	11923769	chrY:11922535-11923769	7	-	11922535	11922535	16724991	1	1234,	0,
#Partially deleted in new
chrY	11957207	11987386	chrY:11957207-11987386	7	+	11957207	11957207	16724991	4	192,4958,944,1906,	0,10874,21704,28273,
#Partially deleted in new
chrY	12244751	12245457	chrY:12244751-12245457	7	+	12244751	12244751	16724991	2	126,245,	0,461,
#Partially deleted in new
chrY	12252320	12258033	chrY:12252320-12258033	7	-	12252320	12252320	16724991	3	198,127,152,	0,1660,5561,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	12273472	12273764	chrY:12273472-12273764	3	+	12273472	12273472	8553170	1	292,	0,
#Partially deleted in new
chrY	12321622	12322835	chrY:12321622-12322835	7	+	12321622	12321622	16724991	1	1213,	0,
#Partially deleted in new
chrY	12339812	12347487	chrY:12339812-12347487	7	+	12339812	12339812	16724991	3	163,120,352,	0,1363,7323,
#Partially deleted in new
chrY	12345076	12347495	chrY:12345076-12347495	5	+	12345076	12345076	16724991	2	139,360,	0,2059,
#Partially deleted in new
chrY	12354095	12387328	chrY:12354095-12387328	7	+	12354095	12354095	16724991	8	43,150,122,122,134,163,122,359,	0,8129,11844,13101,28240,29045,30213,32874,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	12402250	12420456	chrY:12402250-12420456	5	-	12402250	12402250	16724991	3	340,142,141,	0,4545,18065,
#Partially deleted in new
chrY	12406795	12420322	chrY:12406795-12420322	5	-	12406795	12406795	16724991	2	142,7,	0,13520,
#Partially deleted in new
chrY	12440045	12507369	chrY:12440045-12507369	7	-	12440045	12440045	16724991	8	117,36,51,58,63,24,36,61,	0,3219,16099,19656,28397,44685,48388,67263,
#Partially deleted in new
chrY	12537772	12544883	chrY:12537772-12544883	7	+	12537772	12537772	16724991	3	129,2155,100,	0,3287,7011,
#Partially deleted in new
chrY	12618982	12634402	chrY:12618982-12634402	7	-	12618982	12618982	16724991	5	141,108,136,145,118,	0,643,1047,13747,15302,
#Partially deleted in new
chrY	12701230	12860839	chrY:12701230-12860839	3	+	12709447	12859416	789624	46	825,60,156,149,80,113,219,116,252,139,153,105,207,137,134,88,343,96,212,241,150,121,131,279,126,126,170,109,147,147,223,221,191,174,142,751,124,226,130,186,221,89,157,213,96,1561,	0,7403,8157,19358,20877,23882,25344,34381,34767,35180,36926,38294,55961,57275,59253,69837,72352,74240,75418,76788,77375,78295,84972,85291,89176,90268,91801,108948,109441,110404,111599,114893,117189,132457,136680,138633,139779,141009,141833,145102,145702,146008,155109,155402,156335,158048,
#Partially deleted in new
chrY	12702039	12721203	chrY:12702039-12721203	0	+	12702039	12702039	8553170	3	16,156,615,	0,7348,18549,
#Partially deleted in new
chrY	12709435	12860839	chrY:12709435-12860839	0	+	12709435	12709435	8553170	44	108,149,80,113,219,116,252,139,153,105,207,137,134,88,343,96,212,241,150,121,131,279,126,126,170,109,147,147,223,221,191,174,142,751,124,241,130,186,221,89,157,213,96,1561,	0,11153,12672,15677,17139,26176,26562,26975,28721,30089,47756,49070,51048,61632,64147,66035,67213,68583,69170,70090,76767,77086,80971,82063,83596,100743,101236,102199,103394,106688,108984,124252,128475,130428,131574,132789,133628,136897,137497,137803,146904,147197,148130,149843,
#Partially deleted in new
chrY	12801972	12803830	chrY:12801972-12803830	7	-	12801972	12801972	16724991	2	744,769,	0,1089,
#Partially deleted in new
chrY	12847044	12859612	chrY:12847044-12859612	0	+	12847044	12859416	789624	5	109,157,213,96,334,	0,9295,9588,10521,12234,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	12856812	12860839	chrY:12856812-12860839	0	+	12856812	12856812	8553170	2	849,1561,	0,2466,
#Partially deleted in new
chrY	12904107	12918539	chrY:12904107-12918539	1	+	12904936	12918122	789624	18	307,47,58,48,130,156,100,136,86,99,161,145,145,182,118,154,140,497,	0,827,3429,5252,7731,8619,8855,9610,10456,10776,10959,11522,11775,12153,12409,12799,13295,13935,
#Partially deleted in new
chrY	12904117	12913853	chrY:12904117-12913853	0	+	12904936	12913853	789624	8	297,124,58,48,130,156,100,136,	0,740,3419,5242,7721,8609,8845,9600,
#Partially deleted in new
chrY	12904830	12920478	chrY:12904830-12920478	3	+	12904936	12918122	789624	17	151,58,48,130,156,100,136,86,99,161,145,145,182,118,154,140,2436,	0,2706,4529,7008,7896,8132,8887,9733,10053,10236,10799,11052,11430,11686,12076,12572,13212,
#Partially deleted in new
chrY	12904848	12909696	chrY:12904848-12909696	0	+	12904848	12904848	8553170	3	133,58,337,	0,2688,4511,
#Partially deleted in new
chrY	12905737	12914649	chrY:12905737-12914649	0	+	12905779	12914649	789624	8	78,58,48,130,156,100,136,86,	0,1799,3622,6101,6989,7225,7980,8826,
#Partially deleted in new
chrY	12912639	12913801	chrY:12912639-12913801	0	+	12912639	12912639	8553170	2	423,84,	0,1078,
#Partially deleted in new
chrY	12912962	12914899	chrY:12912962-12914899	0	+	12912962	12912962	8553170	3	100,136,336,	0,755,1601,
#Partially deleted in new
chrY	12913007	12915227	chrY:12913007-12915227	0	+	12913007	12913007	8553170	4	55,136,86,344,	0,710,1556,1876,
#Deleted in new
chrY	12915495	12916353	chrY:12915495-12916353	0	+	12915495	12915495	8553170	3	279,145,93,	0,387,765,
#Partially deleted in new
chrY	12930164	12948182	chrY:12930164-12948182	7	-	12930164	12930164	16724991	8	163,85,44,35,48,20,104,83,	0,5037,15455,15724,15860,16123,17510,17935,
#Partially deleted in new
chrY	13083789	13095805	chrY:13083789-13095805	7	+	13083789	13083789	16724991	2	555,1231,	0,10785,
#Partially deleted in new
chrY	13153930	13162214	chrY:13153930-13162214	7	-	13153930	13153930	16724991	3	94,161,1379,	0,6025,6905,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	13159272	13161549	chrY:13159272-13161549	4	-	13159272	13159272	16724991	2	197,656,	0,1621,
#Partially deleted in new
chrY	13230883	13231439	chrY:13230883-13231439	7	+	13230883	13230883	16724991	1	556,	0,
#Partially deleted in new
chrY	13248378	13480673	chrY:13248378-13480673	1	-	13249855	13479665	0	28	1504,171,127,142,188,115,149,75,65,206,106,130,773,396,96,93,220,99,127,94,35,55,121,59,50,109,64,1160,	0,2638,11899,49328,50578,54498,57020,57659,57807,75176,76222,77842,87184,106624,107544,109498,111388,112051,117888,120877,145480,148539,162614,166356,200638,221742,230875,231135,
#Partially deleted in new
chrY	13248378	13480670	chrY:13248378-13480670	1	-	13249855	13479665	0	29	1504,171,127,142,188,115,149,75,65,206,106,130,773,396,96,93,135,220,99,127,94,35,55,121,59,50,109,64,1157,	0,2638,11899,49328,50578,54498,57020,57659,57807,75176,76222,77842,87184,106624,107544,109498,110709,111388,112051,117888,120877,145480,148539,162614,166356,200638,221742,230875,231135,
#Partially deleted in new
chrY	13248378	13480670	chrY:13248378-13480670	1	-	13249855	13479665	789624	28	1504,127,142,188,115,149,75,65,206,106,130,773,396,96,93,135,220,99,127,94,35,55,121,59,50,109,64,1157,	0,11899,49328,50578,54498,57020,57659,57807,75176,76222,77842,87184,106624,107544,109498,110709,111388,112051,117888,120877,145480,148539,162614,166356,200638,221742,230875,231135,
#Partially deleted in new
chrY	13248378	13480670	chrY:13248378-13480670	1	-	13249855	13479665	789624	29	1504,171,127,142,188,115,149,75,65,206,106,130,773,48,396,96,93,220,99,127,94,35,55,121,59,50,109,64,1157,	0,2638,11899,49328,50578,54498,57020,57659,57807,75176,76222,77842,87184,106407,106624,107544,109498,111388,112051,117888,120877,145480,148539,162614,166356,200638,221742,230875,231135,
#Partially deleted in new
chrY	13248378	13480670	chrY:13248378-13480670	1	-	13249855	13479665	789624	29	1504,171,127,142,188,115,149,75,65,206,106,130,773,396,96,93,90,135,220,127,94,35,55,121,59,50,109,64,1157,	0,2638,11899,49328,50578,54498,57020,57659,57807,75176,76222,77842,87184,106624,107544,109498,110085,110709,111388,117888,120877,145480,148539,162614,166356,200638,221742,230875,231135,
#Partially deleted in new
chrY	13248378	13480670	chrY:13248378-13480670	3	-	13249855	13479665	789624	30	1504,171,127,142,188,115,149,75,65,206,106,130,773,396,96,93,156,135,220,99,127,94,35,55,121,59,50,109,64,1157,	0,2638,11899,49328,50578,54498,57020,57659,57807,75176,76222,77842,87184,106624,107544,109498,110085,110709,111388,112051,117888,120877,145480,148539,162614,166356,200638,221742,230875,231135,
#Partially deleted in new
chrY	13248378	13480670	chrY:13248378-13480670	1	-	13249855	13479665	789624	28	1504,171,127,142,188,115,149,65,206,106,130,773,396,96,93,135,220,99,127,94,35,55,121,59,50,109,64,1157,	0,2638,11899,49328,50578,54498,57020,57807,75176,76222,77842,87184,106624,107544,109498,110709,111388,112051,117888,120877,145480,148539,162614,166356,200638,221742,230875,231135,
#Partially deleted in new
chrY	13248378	13480670	chrY:13248378-13480670	1	-	13249855	13479665	789624	29	1504,171,127,142,188,115,149,75,65,206,106,130,773,396,96,93,156,220,99,127,94,35,55,121,59,50,109,64,1157,	0,2638,11899,49328,50578,54498,57020,57659,57807,75176,76222,77842,87184,106624,107544,109498,110085,111388,112051,117888,120877,145480,148539,162614,166356,200638,221742,230875,231135,
#Partially deleted in new
chrY	13248378	13480670	chrY:13248378-13480670	1	-	13249855	13479665	789624	24	1504,171,127,142,188,115,149,75,65,206,106,130,773,396,96,93,220,99,127,94,121,59,64,1157,	0,2638,11899,49328,50578,54498,57020,57659,57807,75176,76222,77842,87184,106624,107544,109498,111388,112051,117888,120877,162614,166356,230875,231135,
#Partially deleted in new
chrY	13249855	13479665	chrY:13249855-13479665	1	-	13249855	13479665	0	28	27,127,142,188,115,149,75,65,206,106,130,773,24,96,93,135,220,99,127,94,35,55,121,59,50,109,64,152,	0,10422,47851,49101,53021,55543,56182,56330,73699,74745,76365,85707,105519,106067,108021,109232,109911,110574,116411,119400,144003,147062,161137,164879,199161,220265,229398,229658,
#Partially deleted in new
chrY	13286637	13287378	chrY:13286637-13287378	7	+	13286637	13286637	16724991	1	741,	0,
#Partially deleted in new
chrY	13297440	13480670	chrY:13297440-13480670	1	-	13297702	13479665	0	25	408,188,115,149,75,65,206,106,130,773,396,96,93,220,99,127,94,35,55,121,59,50,109,64,1157,	0,1516,5436,7958,8597,8745,26114,27160,28780,38122,57562,58482,60436,62326,62989,68826,71815,96418,99477,113552,117294,151576,172680,181813,182073,
#Boundary problem: need 20, got 0, diff 20, mapped 0.0
chrY	13323033	13480670	chrY:13323033-13480670	1	-	13323113	13479665	0	20	335,206,106,130,773,396,96,93,220,99,127,94,35,55,121,59,50,109,64,1157,	0,521,1567,3187,12529,31969,32889,34843,36733,37396,43233,46222,70825,73884,87959,91701,125983,147087,156220,156480,
#Partially deleted in new
chrY	13360487	13479540	chrY:13360487-13479540	0	-	13360487	13360487	8553170	10	41,127,94,55,121,59,50,109,64,27,	0,5779,8768,36430,50505,54247,88529,109633,118766,119026,
#Partially deleted in new
chrY	13393151	13479504	chrY:13393151-13479504	0	-	13393151	13393151	8553170	7	742,55,121,59,50,109,251,	0,3766,17841,21583,55865,76969,86102,
#Partially deleted in new
chrY	13396301	13479978	chrY:13396301-13479978	1	-	13396903	13479665	789624	7	671,121,59,50,109,64,465,	0,14691,18433,52715,73819,82952,83212,
#Deleted in new
chrY	13479041	13479923	chrY:13479041-13479923	0	-	13479041	13479041	8553170	2	276,410,	0,472,
#Partially deleted in new
chrY	13703566	13706024	chrY:13703566-13706024	3	+	13704335	13705259	789624	2	869,800,	0,1658,
#Partially deleted in new
chrY	13751655	13915824	chrY:13751655-13915824	7	+	13751655	13751655	16724991	11	350,48,223,184,117,206,95,171,221,142,59,	0,39263,106846,117411,120026,135602,151218,154025,155170,156516,164110,
#Partially deleted in new
chrY	13751792	13858594	chrY:13751792-13858594	4	+	13751792	13751792	16724991	6	213,66,150,48,134,78,	0,1301,2847,39126,102651,106724,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrY	13753097	13871706	chrY:13753097-13871706	4	+	13753097	13753097	16724991	7	62,150,48,130,154,62,74,	0,1542,37821,105419,106570,115969,118535,
#Deleted in new
chrY	13985771	13986513	chrY:13985771-13986513	3	-	13985870	13986440	789624	2	375,175,	0,567,
#Deleted in new
chrY	14056216	14056958	chrY:14056216-14056958	3	+	14056289	14056859	789624	2	175,375,	0,367,
#Partially deleted in new
chrY	14081074	14086600	chrY:14081074-14086600	7	+	14081074	14081074	16724991	3	95,144,66,	0,231,5460,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	14276211	14277489	chrY:14276211-14277489	3	-	14276211	14276211	8553170	2	400,140,	0,1138,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrY	14522572	14845639	chrY:14522572-14845639	2	+	14622119	14841262	789624	7	369,583,60,153,186,790,5227,	0,99436,196886,200544,301615,307157,317840,
#Partially deleted in new
chrY	14522637	14622497	chrY:14522637-14622497	0	+	14522637	14522637	8553170	2	304,489,	0,99371,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrY	14522751	14845650	chrY:14522751-14845650	1	+	14723148	14841262	789624	6	190,60,153,186,790,5238,	0,196707,200365,301436,306978,317661,
#Partially deleted in new
chrY	14523745	14843726	chrY:14523745-14843726	0	+	14622119	14841262	789624	6	153,571,153,186,790,3314,	0,98275,199371,300442,305984,316667,
#Partially deleted in new
chrY	14523745	14843726	chrY:14523745-14843726	1	+	14622119	14841262	789624	8	153,571,60,153,111,186,790,3314,	0,98275,195713,199371,224873,300442,305984,316667,
#Partially deleted in new
chrY	14523966	14622220	chrY:14523966-14622220	0	+	14622119	14622220	789624	2	318,212,	0,98042,
#Partially deleted in new
chrY	14524528	14622368	chrY:14524528-14622368	0	+	14524528	14524528	8553170	2	180,360,	0,97480,
#Partially deleted in new
chrY	14524573	14843647	chrY:14524573-14843647	1	+	14622119	14841262	789624	6	363,583,153,186,790,3235,	0,97435,198543,299614,305156,315839,
#Partially deleted in new
chrY	14622180	14733549	chrY:14622180-14733549	0	+	14622180	14733537	789624	4	411,60,153,98,	0,97278,100936,111271,
#Partially deleted in new
chrY	14639095	14640358	chrY:14639095-14640358	7	+	14639095	14639095	16724991	1	1263,	0,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	14793641	14804033	chrY:14793641-14804033	3	-	14793641	14793641	5263520	4	346,88,69,29,	0,4980,7634,10363,
#Deleted in new
chrY	14907897	14908068	chrY:14907897-14908068	7	+	14907897	14907897	16724991	1	171,	0,
#Deleted in new
chrY	14941546	14941750	chrY:14941546-14941750	7	-	14941546	14941546	16724991	1	204,	0,
#Partially deleted in new
chrY	14941745	14942715	chrY:14941745-14942715	7	+	14941745	14941745	16724991	2	76,55,	0,915,
#Partially deleted in new
chrY	15348661	15456074	chrY:15348661-15456074	7	-	15348661	15348661	16724991	3	205,250,40,	0,32931,107373,
#Partially deleted in new
chrY	15547215	15593331	chrY:15547215-15593331	7	+	15547215	15547215	16724991	5	143,331,419,157,101,	0,2395,4381,19556,46015,
#Deleted in new
chrY	16138247	16138379	chrY:16138247-16138379	3	-	16138247	16138247	8553170	1	132,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	16248934	16249041	chrY:16248934-16249041	3	+	16248934	16248934	8553170	1	107,	0,
#Deleted in new
chrY	16336282	16336389	chrY:16336282-16336389	3	-	16336282	16336282	8553170	1	107,	0,
#Deleted in new
chrY	17192825	17193652	chrY:17192825-17193652	7	+	17192825	17192825	16724991	1	827,	0,
#Partially deleted in new
chrY	17464878	17465214	chrY:17464878-17465214	7	-	17464878	17464878	16724991	1	336,	0,
#Partially deleted in new
chrY	17500957	17515018	chrY:17500957-17515018	3	+	17500957	17500957	8553170	7	158,50,129,94,171,94,210,	0,753,12140,12516,13203,13483,13851,
#Deleted in new
chrY	17514501	17516715	chrY:17514501-17516715	7	+	17514501	17514501	16724991	6	209,263,79,95,117,127,	0,254,647,1051,1514,2087,
#Deleted in new
chrY	17516835	17519038	chrY:17516835-17519038	7	-	17516835	17516835	16724991	4	1049,91,109,57,	0,1561,1732,2146,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrY	17552799	17579754	chrY:17552799-17579754	3	-	17552799	17552799	8553170	5	1155,85,235,118,439,	0,1242,2976,23903,26516,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	17557863	17557976	chrY:17557863-17557976	7	+	17557863	17557863	16724991	1	113,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	17559773	17559889	chrY:17559773-17559889	7	+	17559773	17559773	16724991	1	116,	0,
#Deleted in new
chrY	17568961	17569051	chrY:17568961-17569051	3	-	17568961	17568961	8553170	1	90,	0,
#Partially deleted in new
chrY	17621258	17625832	chrY:17621258-17625832	7	-	17621258	17621258	16724991	10	124,80,99,92,73,125,154,116,141,186,	0,201,758,1546,1888,2605,2833,3064,3362,4388,
#Partially deleted in new
chrY	17628512	17629402	chrY:17628512-17629402	7	+	17628512	17628512	16724991	2	473,42,	0,848,
#Deleted in new
chrY	17705967	17708185	chrY:17705967-17708185	7	-	17705967	17705967	16724991	2	211,187,	0,2031,
#Deleted in new
chrY	17721597	17723177	chrY:17721597-17723177	7	+	17721597	17721597	16724991	1	1580,	0,
#Deleted in new
chrY	17726751	17727080	chrY:17726751-17727080	7	+	17726751	17726751	16724991	1	329,	0,
#Partially deleted in new
chrY	17729527	17744596	chrY:17729527-17744596	7	-	17729527	17729527	16724991	3	272,116,57,	0,12388,15012,
#Deleted in new
chrY	17757000	17758125	chrY:17757000-17758125	7	-	17757000	17757000	16724991	1	1125,	0,
#Deleted in new
chrY	17768979	17770560	chrY:17768979-17770560	5	-	17768979	17768979	16724991	1	1581,	0,
#Partially deleted in new
chrY	17769115	17777400	chrY:17769115-17777400	7	-	17769115	17769115	16724991	2	765,335,	0,7950,
#Deleted in new
chrY	17782209	17784815	chrY:17782209-17784815	7	+	17782209	17782209	16724991	3	126,92,189,	0,700,2417,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	17788314	17789484	chrY:17788314-17789484	7	-	17788314	17788314	16724991	4	96,171,29,142,	0,476,847,1028,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	17789002	17789162	chrY:17789002-17789162	3	-	17789002	17789002	8553170	1	160,	0,
#Partially deleted in new
chrY	17797982	17800696	chrY:17797982-17800696	7	-	17797982	17797982	16724991	3	86,142,93,	0,527,2621,
#Partially deleted in new
chrY	17809806	17825329	chrY:17809806-17825329	7	+	17809806	17809806	16724991	11	100,201,68,31,137,147,106,120,74,92,149,	0,1320,3715,3868,5421,5882,9118,10527,12484,13662,15374,
#Deleted in new
chrY	17837200	17837528	chrY:17837200-17837528	7	-	17837200	17837200	16724991	1	328,	0,
#Deleted in new
chrY	17877409	17880218	chrY:17877409-17880218	3	-	17877784	17879892	789624	3	420,28,1921,	0,425,888,
#Deleted in new
chrY	17878259	17880220	chrY:17878259-17880220	1	-	17878266	17879892	0	1	1961,	0,
#Partially deleted in new
chrY	17882098	17883708	chrY:17882098-17883708	7	-	17882098	17882098	16724991	2	1200,66,	0,1544,
#Deleted in new
chrY	17908754	17910806	chrY:17908754-17910806	7	+	17908754	17908754	16724991	2	221,209,	0,1843,
#Partially deleted in new
chrY	17912698	17921630	chrY:17912698-17921630	7	-	17912698	17912698	16724991	5	125,85,201,221,222,	0,2255,4324,6325,8710,
#Partially deleted in new
chrY	17951588	17953500	chrY:17951588-17953500	7	+	17951588	17951588	16724991	2	165,1439,	0,473,
#Partially deleted in new
chrY	17984348	17993260	chrY:17984348-17993260	7	+	17984348	17984348	16724991	5	221,219,190,85,93,	0,2388,4407,6594,8819,
#Deleted in new
chrY	17995200	17997252	chrY:17995200-17997252	7	-	17995200	17995200	16724991	2	209,221,	0,1831,
#Partially deleted in new
chrY	18022298	18023908	chrY:18022298-18023908	7	+	18022298	18022298	16724991	2	66,1213,	0,397,
#Deleted in new
chrY	18025786	18027740	chrY:18025786-18027740	1	+	18026114	18027740	0	1	1954,	0,
#Deleted in new
chrY	18025788	18028597	chrY:18025788-18028597	3	+	18026114	18028222	789624	3	1921,28,420,	0,2356,2389,
#Deleted in new
chrY	18068482	18068810	chrY:18068482-18068810	7	+	18068482	18068482	16724991	1	328,	0,
#Partially deleted in new
chrY	18080680	18096202	chrY:18080680-18096202	7	-	18080680	18080680	16724991	10	150,91,120,106,147,137,31,68,201,98,	0,1769,4875,6298,9493,9964,11624,11740,14002,15424,
#Partially deleted in new
chrY	18105313	18108102	chrY:18105313-18108102	7	+	18105313	18105313	16724991	3	93,147,156,	0,2042,2633,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	18116526	18117695	chrY:18116526-18117695	7	+	18116526	18116526	16724991	4	138,29,159,96,	0,293,534,1073,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	18116847	18117007	chrY:18116847-18117007	3	+	18116847	18116847	8553170	1	160,	0,
#Deleted in new
chrY	18121194	18123799	chrY:18121194-18123799	7	-	18121194	18121194	16724991	3	189,92,126,	0,1814,2479,
#Partially deleted in new
chrY	18128609	18136886	chrY:18128609-18136886	7	+	18128609	18128609	16724991	2	335,758,	0,7519,
#Deleted in new
chrY	18135448	18137029	chrY:18135448-18137029	5	+	18135448	18135448	16724991	1	1581,	0,
#Deleted in new
chrY	18147883	18149008	chrY:18147883-18149008	7	+	18147883	18147883	16724991	1	1125,	0,
#Partially deleted in new
chrY	18161365	18176484	chrY:18161365-18176484	7	+	18161365	18161365	16724991	3	104,116,272,	0,2612,14847,
#Deleted in new
chrY	18178931	18179260	chrY:18178931-18179260	7	-	18178931	18178931	16724991	1	329,	0,
#Deleted in new
chrY	18182834	18184414	chrY:18182834-18184414	7	-	18182834	18182834	16724991	1	1580,	0,
#Partially deleted in new
chrY	18276606	18277495	chrY:18276606-18277495	7	-	18276606	18276606	16724991	2	42,473,	0,416,
#Partially deleted in new
chrY	18280177	18284761	chrY:18280177-18284761	7	+	18280177	18280177	16724991	9	172,440,146,108,72,54,99,84,128,	0,1068,1585,1860,2612,2934,3714,4293,4456,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrY	18326252	18353210	chrY:18326252-18353210	3	+	18326252	18326252	8553170	5	438,118,235,85,1155,	0,2938,23747,25631,25803,
#Deleted in new
chrY	18336959	18337049	chrY:18336959-18337049	3	+	18336959	18336959	8553170	1	90,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	18346122	18346238	chrY:18346122-18346238	7	-	18346122	18346122	16724991	1	116,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	18348034	18348147	chrY:18348034-18348147	7	-	18348034	18348034	16724991	1	113,	0,
#Deleted in new
chrY	18386973	18389151	chrY:18386973-18389151	7	+	18386973	18386973	16724991	4	57,109,110,1024,	0,362,551,1154,
#Deleted in new
chrY	18389296	18391510	chrY:18389296-18391510	5	-	18389296	18389296	16724991	6	127,117,95,120,265,209,	0,583,1068,1488,1697,2005,
#Partially deleted in new
chrY	18390993	18405046	chrY:18390993-18405046	3	-	18390993	18390993	8553170	7	210,94,171,94,129,50,158,	0,484,687,1451,1792,13250,13895,
#Partially deleted in new
chrY	18391064	18405046	chrY:18391064-18405046	7	-	18391064	18391064	16724991	7	139,94,171,94,129,50,158,	0,413,616,1380,1721,13179,13824,
#Partially deleted in new
chrY	18440796	18441125	chrY:18440796-18441125	7	+	18440796	18440796	16724991	1	329,	0,
#Partially deleted in new
chrY	18453149	18472137	chrY:18453149-18472137	7	-	18453149	18453149	16724991	11	114,91,70,119,106,168,137,31,68,201,74,	0,1743,2939,4795,7082,10298,10762,15116,15234,17520,18914,
#Partially deleted in new
chrY	18481086	18487400	chrY:18481086-18487400	7	+	18481086	18481086	16724991	4	134,157,176,96,	0,5107,5666,6218,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	18486510	18486672	chrY:18486510-18486672	3	+	18486510	18486510	8553170	1	162,	0,
#Partially deleted in new
chrY	18490914	18494295	chrY:18490914-18494295	7	-	18490914	18490914	16724991	4	191,93,125,221,	0,2095,2266,3160,
#Deleted in new
chrY	18508576	18509068	chrY:18508576-18509068	7	+	18508576	18508576	16724991	1	492,	0,
#Deleted in new
chrY	18529357	18529623	chrY:18529357-18529623	7	+	18529357	18529357	16724991	1	266,	0,
#Deleted in new
chrY	18532325	18532656	chrY:18532325-18532656	7	-	18532325	18532325	16724991	1	331,	0,
#Partially deleted in new
chrY	18540979	18544128	chrY:18540979-18544128	7	+	18540979	18540979	16724991	3	130,747,125,	0,1866,3024,
#Deleted in new
chrY	18546670	18548592	chrY:18546670-18548592	3	+	18546787	18548471	789624	2	630,814,	0,1108,
#Partially deleted in new
chrY	18546690	18588963	chrY:18546690-18588963	1	+	18546787	18588634	789624	2	610,428,	0,41845,
#Partially deleted in new
chrY	18546690	18588963	chrY:18546690-18588963	0	+	18546787	18550804	789624	6	610,110,87,155,86,428,	0,3423,4092,5226,35982,41845,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	18546719	18551465	chrY:18546719-18551465	1	+	18546787	18550804	789624	3	581,110,683,	0,3394,4063,
#Deleted in new
chrY	18578416	18578560	chrY:18578416-18578560	7	+	18578416	18578416	16724991	1	144,	0,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrY	18581205	18590521	chrY:18581205-18590521	3	-	18581205	18581205	789624	5	1143,137,114,101,142,	0,6206,6925,7400,9174,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	18581205	18588712	chrY:18581205-18588712	0	-	18581205	18581205	8553170	4	1143,137,114,107,	0,6206,6925,7400,
#Partially deleted in new
chrY	18582062	18629077	chrY:18582062-18629077	7	-	18582062	18582062	16724991	16	294,67,151,137,101,112,627,112,130,136,74,128,107,172,137,105,	0,591,1847,5349,6543,17157,17644,20318,20964,21961,23685,25395,27275,40003,44957,46910,
#Deleted in new
chrY	18649670	18650279	chrY:18649670-18650279	7	+	18649670	18649670	16724991	1	609,	0,
#Deleted in new
chrY	18655519	18656190	chrY:18655519-18656190	7	-	18655519	18655519	16724991	2	86,145,	0,526,
#Partially deleted in new
chrY	18674032	18738089	chrY:18674032-18738089	7	+	18674032	18674032	16724991	21	12,99,203,68,31,105,137,172,107,99,74,136,130,112,628,112,101,137,151,67,43,	0,184,1337,4409,4565,17290,19211,24130,36925,38785,40548,42210,43213,43877,46036,47038,57664,58822,62310,63650,64014,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrY	18729881	18739197	chrY:18729881-18739197	5	+	18729881	18729881	16724991	5	142,101,114,137,1143,	0,1815,2277,2973,8173,
#Partially deleted in new
chrY	18731439	18773715	chrY:18731439-18773715	1	-	18731768	18773618	789624	2	428,610,	0,41666,
#Partially deleted in new
chrY	18731439	18773715	chrY:18731439-18773715	0	-	18731439	18731439	789624	6	428,86,155,87,110,610,	0,6205,36891,38093,38743,41666,
#Deleted in new
chrY	18741842	18741986	chrY:18741842-18741986	7	-	18741842	18741842	16724991	1	144,	0,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	18768920	18773686	chrY:18768920-18773686	1	-	18769597	18773618	789624	3	699,110,581,	0,1262,4185,
#Deleted in new
chrY	18771813	18773735	chrY:18771813-18773735	3	-	18771934	18773618	789624	2	814,630,	0,1292,
#Partially deleted in new
chrY	18776278	18779427	chrY:18776278-18779427	7	-	18776278	18776278	16724991	3	125,746,129,	0,537,3020,
#Deleted in new
chrY	18787749	18788080	chrY:18787749-18788080	7	+	18787749	18787749	16724991	1	331,	0,
#Deleted in new
chrY	18790708	18791051	chrY:18790708-18791051	7	-	18790708	18790708	16724991	1	343,	0,
#Deleted in new
chrY	18811337	18811829	chrY:18811337-18811829	7	-	18811337	18811337	16724991	1	492,	0,
#Partially deleted in new
chrY	18826106	18829487	chrY:18826106-18829487	7	+	18826106	18826106	16724991	4	221,124,94,189,	0,990,1192,3192,
#Partially deleted in new
chrY	18833001	18839313	chrY:18833001-18839313	7	-	18833001	18833001	16724991	5	96,175,29,157,132,	0,472,888,1049,6180,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	18833728	18833890	chrY:18833728-18833890	3	-	18833728	18833728	8553170	1	162,	0,
#Partially deleted in new
chrY	18848263	18867280	chrY:18848263-18867280	7	+	18848263	18848263	16724991	11	72,201,65,30,137,116,107,118,68,100,141,	0,1265,3685,3837,8085,8570,11796,14071,15970,17150,18876,
#Deleted in new
chrY	18872101	18872272	chrY:18872101-18872272	7	+	18872101	18872101	16724991	1	171,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	18872500	18878228	chrY:18872500-18878228	1	-	18872500	18872500	8553170	2	334,1161,	0,4567,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	18872502	19077118	chrY:18872502-19077118	3	-	18872502	18872502	789624	3	332,138,74,	0,4565,204542,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrY	18932316	19075996	chrY:18932316-19075996	1	-	18932316	18932316	8553170	5	525,154,50,75,56,	0,112225,112925,136407,143624,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	18932698	19077416	chrY:18932698-19077416	0	-	18932698	18932698	8553170	2	143,372,	0,144346,
#Partially deleted in new
chrY	18985174	18986398	chrY:18985174-18986398	7	+	18985174	18985174	16724991	2	680,181,	0,1043,
#Partially deleted in new
chrY	18992466	18992709	chrY:18992466-18992709	7	-	18992466	18992466	16724991	1	243,	0,
#Deleted in new
chrY	19018982	19019087	chrY:19018982-19019087	3	-	19018982	19018982	8553170	1	105,	0,
#Boundary problem: need 7, got 0, diff 7, mapped 0.0
chrY	19041497	19077395	chrY:19041497-19077395	1	-	19041497	19041497	8553170	7	89,184,34,47,140,75,351,	0,1665,3164,3744,7275,27226,35547,
#Deleted in new
chrY	19076945	19077416	chrY:19076945-19077416	0	-	19076945	19076945	8553170	1	471,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	19253959	19260875	chrY:19253959-19260875	7	-	19253959	19253959	16724991	2	493,349,	0,6567,
#Partially deleted in new
chrY	19327568	19328573	chrY:19327568-19328573	7	+	19327568	19327568	16724991	1	1005,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrY	19455430	19503153	chrY:19455430-19503153	7	-	19455430	19455430	16724991	9	1434,156,78,122,919,240,264,126,122,	0,3493,3858,9675,11025,18474,19209,24738,47601,
#Boundary problem: need 11, got 0, diff 11, mapped 0.0
chrY	19456311	19503136	chrY:19456311-19503136	4	-	19456311	19456311	16724991	11	553,61,156,78,146,122,919,240,264,126,105,	0,745,2612,2977,3647,8794,10144,17593,18328,23857,46720,
#Partially deleted in new
chrY	19456584	19484884	chrY:19456584-19484884	5	-	19456584	19456584	16724991	10	280,156,78,264,324,346,249,130,48,3218,	0,2339,2704,9859,10479,17320,18065,23580,24106,25082,
#Boundary problem: need 5, got 0, diff 5, mapped 0.0
chrY	19567312	19590247	chrY:19567312-19590247	5	+	19567312	19567312	16724991	5	170,298,281,86,165,	0,19897,21057,22214,22770,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	19567349	19590418	chrY:19567349-19590418	4	+	19567349	19567349	16724991	4	221,298,1243,336,	0,19860,21020,22733,
#Partially deleted in new
chrY	19567381	19604120	chrY:19567381-19604120	5	+	19567381	19567381	16724991	11	101,298,92,341,180,195,120,75,93,96,324,	0,19828,22139,22701,24398,26017,28633,30209,32357,34834,36415,
#Partially deleted in new
chrY	19567381	19590423	chrY:19567381-19590423	4	+	19567381	19567381	16724991	4	101,298,92,341,	0,19828,22139,22701,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	19567786	19589849	chrY:19567786-19589849	4	+	19567786	19567786	16724991	4	165,75,298,1480,	0,1598,19423,20583,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	19567828	19589847	chrY:19567828-19589847	4	+	19567828	19567828	16724991	2	123,2638,	0,19381,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	19588542	19593717	chrY:19588542-19593717	4	+	19588542	19588542	16724991	4	108,92,180,319,	0,978,3237,4856,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	19588569	19590419	chrY:19588569-19590419	4	+	19588569	19588569	16724991	3	81,92,337,	0,951,1513,
#Partially deleted in new
chrY	19588608	19593602	chrY:19588608-19593602	6	+	19588608	19588608	16724991	4	42,92,40,204,	0,912,3311,4790,
#Partially deleted in new
chrY	19588610	19593602	chrY:19588610-19593602	4	+	19588610	19588610	16724991	3	40,92,204,	0,910,4788,
#Partially deleted in new
chrY	19590752	19593651	chrY:19590752-19593651	4	+	19590752	19590752	16724991	3	20,180,253,	0,1027,2646,
#Partially deleted in new
chrY	19592449	19606274	chrY:19592449-19606274	5	+	19592449	19592449	16724991	5	365,4267,93,96,2478,	0,949,7289,9766,11347,
#Partially deleted in new
chrY	19593087	19594161	chrY:19593087-19594161	4	+	19593087	19593087	16724991	1	1074,	0,
#Partially deleted in new
chrY	19597356	19604051	chrY:19597356-19604051	4	+	19597356	19597356	16724991	5	309,88,93,96,255,	0,1195,2382,4859,6440,
#Partially deleted in new
chrY	19598187	19598757	chrY:19598187-19598757	7	+	19598187	19598187	16724991	1	570,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	19691940	19694606	chrY:19691940-19694606	3	-	19691940	19691940	8553170	1	2666,	0,
#Boundary problem: need 12, got 0, diff 12, mapped 0.0
chrY	19703864	19716695	chrY:19703864-19716695	0	-	19703864	19703864	8553170	12	2481,423,600,138,180,139,810,97,156,182,195,100,	0,2576,3282,4069,4379,5010,5586,6511,11719,11958,12414,12731,
#Partially deleted in new
chrY	19705414	19744923	chrY:19705414-19744923	1	-	19705994	19744534	0	27	931,200,70,600,138,180,139,359,97,148,125,182,195,120,163,182,159,120,159,146,130,135,171,123,78,169,253,	0,1026,1379,1732,2519,2829,3460,4036,4961,9937,10200,10408,10864,11181,15457,15715,26357,26631,27169,29937,30206,34113,35903,36320,37747,38970,39256,
#Boundary problem: need 28, got 0, diff 28, mapped 0.0
chrY	19705416	19744939	chrY:19705416-19744939	3	-	19705994	19744534	0	28	929,200,70,600,138,180,139,359,97,148,125,182,195,120,163,182,93,159,120,159,146,130,135,171,123,78,169,269,	0,1024,1377,1730,2517,2827,3458,4034,4959,9935,10198,10406,10862,11179,15455,15713,17924,26355,26629,27167,29935,30204,34111,35901,36318,37745,38968,39254,
#Partially deleted in new
chrY	19705419	19744761	chrY:19705419-19744761	1	-	19705994	19744534	0	26	926,200,70,600,138,180,139,359,97,148,125,182,195,120,163,182,159,120,159,146,130,135,123,78,169,91,	0,1021,1374,1727,2514,2824,3455,4031,4956,9932,10195,10403,10859,11176,15452,15710,26352,26626,27164,29932,30201,34108,36315,37742,38965,39251,
#Partially deleted in new
chrY	19705424	19722467	chrY:19705424-19722467	0	-	19705424	19705424	8553170	15	921,423,600,138,180,139,359,97,148,125,289,195,120,163,1338,	0,1016,1722,2509,2819,3450,4026,4951,9927,10190,10398,10854,11171,15447,15705,
#Partially deleted in new
chrY	19706062	19744923	chrY:19706062-19744923	0	-	19706062	19744534	789624	26	283,200,70,600,138,180,139,359,97,148,125,182,195,120,163,182,159,120,159,146,130,135,171,78,169,253,	0,378,731,1084,1871,2181,2812,3388,4313,9289,9552,9760,10216,10533,14809,15067,25709,25983,26521,29289,29558,33465,35255,37099,38322,38608,
#Partially deleted in new
chrY	19707181	19708949	chrY:19707181-19708949	0	-	19707181	19708949	789624	4	565,138,102,75,	0,752,1140,1693,
#Partially deleted in new
chrY	19709699	19710606	chrY:19709699-19710606	0	-	19709699	19709699	8553170	2	561,231,	0,676,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	19715135	19716348	chrY:19715135-19716348	0	-	19715135	19715135	8553170	3	604,182,70,	0,687,1143,
#Partially deleted in new
chrY	19721271	19744711	chrY:19721271-19744711	0	-	19721271	19744534	789624	11	40,159,120,159,146,130,171,123,78,169,41,	0,10500,10774,11312,14080,14349,20046,20463,21890,23113,23399,
#Partially deleted in new
chrY	19932129	19932500	chrY:19932129-19932500	7	-	19932129	19932129	16724991	1	371,	0,
#Partially deleted in new
chrY	19986574	19987852	chrY:19986574-19987852	7	-	19986574	19986574	16724991	2	130,788,	0,490,
#Partially deleted in new
chrY	20001184	20012204	chrY:20001184-20012204	7	-	20001184	20001184	16724991	3	515,89,119,	0,4555,10901,
#Partially deleted in new
chrY	20390050	20396796	chrY:20390050-20396796	7	+	20390050	20390050	16724991	3	60,512,526,	0,5457,6220,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrY	20465667	20519228	chrY:20465667-20519228	3	-	20465667	20465667	5263520	6	155,240,60,110,105,958,	0,760,2521,4204,41684,52603,
#Partially deleted in new
chrY	20507253	20518407	chrY:20507253-20518407	0	-	20507253	20507253	8553170	2	203,137,	0,11017,
#Deleted in new
chrY	20570221	20570519	chrY:20570221-20570519	7	-	20570221	20570221	16724991	1	298,	0,
#Partially deleted in new
chrY	20575724	20593154	chrY:20575724-20593154	3	+	20575871	20592346	789624	7	163,84,104,51,82,92,814,	0,3883,6865,8749,12299,13759,16616,
#Partially deleted in new
chrY	20575777	20588529	chrY:20575777-20588529	0	+	20575777	20575777	8553170	5	110,84,104,51,506,	0,3830,6812,8696,12246,
#Partially deleted in new
chrY	20575793	20592630	chrY:20575793-20592630	1	+	20575871	20592346	789624	6	94,84,104,82,92,290,	0,3814,6796,12230,13690,16547,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	20586717	20592630	chrY:20586717-20592630	0	+	20586717	20586717	8553170	2	2858,290,	0,5623,
#Partially deleted in new
chrY	20587846	20592630	chrY:20587846-20592630	0	+	20587846	20587846	8553170	3	259,92,290,	0,1637,4494,
#Partially deleted in new
chrY	20727253	20742900	chrY:20727253-20742900	7	+	20727253	20727253	16724991	9	244,131,148,64,99,68,74,125,73,	0,2147,2669,3515,3688,6829,13646,14057,15574,
#Partially deleted in new
chrY	20756163	20781032	chrY:20756163-20781032	3	+	20756163	20781032	789624	7	3,78,181,98,172,158,102,	0,614,3704,5120,12641,23345,24767,
#Partially deleted in new
chrY	20808775	20811809	chrY:20808775-20811809	7	-	20808775	20808775	16724991	2	690,491,	0,2543,
#Partially deleted in new
chrY	20843255	20843710	chrY:20843255-20843710	7	-	20843255	20843255	16724991	1	455,	0,
#Partially deleted in new
chrY	20861336	20862337	chrY:20861336-20862337	7	+	20861336	20861336	16724991	1	1001,	0,
#Partially deleted in new
chrY	20907343	20907562	chrY:20907343-20907562	7	-	20907343	20907343	16724991	1	219,	0,
#Partially deleted in new
chrY	21130869	21131181	chrY:21130869-21131181	7	+	21130869	21130869	16724991	1	312,	0,
#Deleted in new
chrY	21221105	21222089	chrY:21221105-21222089	7	-	21221105	21221105	16724991	1	984,	0,
#Boundary problem: need 9, got 0, diff 9, mapped 0.0
chrY	21311267	21318895	chrY:21311267-21318895	7	+	21311267	21311267	16724991	9	109,179,118,31,115,111,89,178,122,	0,554,2910,3339,5366,6348,6540,7052,7506,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	21382953	21386360	chrY:21382953-21386360	3	-	21383185	21386263	789624	4	327,365,57,129,	0,478,959,3278,
#Partially deleted in new
chrY	21394990	21401585	chrY:21394990-21401585	7	-	21394990	21394990	16724991	7	301,89,111,111,115,104,109,	0,709,880,1355,2347,5932,6486,
#Partially deleted in new
chrY	21395147	21401562	chrY:21395147-21401562	4	-	21395147	21395147	16724991	5	144,89,111,104,86,	0,552,723,5775,6329,
#Deleted in new
chrY	21405769	21405995	chrY:21405769-21405995	7	+	21405769	21405769	16724991	1	226,	0,
#Partially deleted in new
chrY	21430696	21437245	chrY:21430696-21437245	7	-	21430696	21430696	16724991	6	301,89,111,115,153,178,	0,709,890,1887,3994,6371,
#Deleted in new
chrY	21465383	21467163	chrY:21465383-21467163	7	-	21465383	21465383	16724991	3	117,83,320,	0,345,1460,
#Deleted in new
chrY	21468157	21470683	chrY:21468157-21470683	7	+	21468157	21468157	16724991	6	474,78,112,146,82,23,	0,1083,1289,1500,1754,2503,
#Partially deleted in new
chrY	21493518	21501968	chrY:21493518-21501968	7	+	21493518	21493518	16724991	10	178,153,115,111,111,111,111,111,89,299,	0,2091,4254,5324,5876,6421,6965,7453,7651,8151,
#Deleted in new
chrY	21508298	21510470	chrY:21508298-21510470	7	-	21508298	21508298	16724991	5	48,146,64,66,393,	0,165,397,724,1779,
#Partially deleted in new
chrY	21511337	21525786	chrY:21511337-21525786	3	+	21513350	21525508	789624	12	148,113,104,178,153,115,111,111,111,111,89,577,	0,2009,2596,5719,7812,9975,11045,11597,12142,13174,13372,13872,
#Partially deleted in new
chrY	21511362	21525786	chrY:21511362-21525786	0	+	21513350	21519182	789624	11	123,113,104,153,115,111,111,111,111,89,577,	0,1984,2571,7787,9950,11020,11572,12117,13149,13347,13847,
#Partially deleted in new
chrY	21511371	21549318	chrY:21511371-21549318	3	+	21513350	21549048	0	12	114,113,104,178,153,115,111,111,111,111,89,569,	0,1975,2562,29226,31319,33482,34552,35104,35649,36681,36878,37378,
#Partially deleted in new
chrY	21511424	21549094	chrY:21511424-21549094	1	+	21513350	21549048	0	11	61,113,104,178,153,115,111,111,111,89,345,	0,1922,2509,29173,31266,33429,34499,35051,35596,36825,37325,
#Partially deleted in new
chrY	21511424	21549094	chrY:21511424-21549094	1	+	21513350	21549048	8553170	11	61,113,104,178,153,115,111,111,111,89,345,	0,1922,2509,5632,7725,9888,10958,11510,12055,13285,37325,
#Deleted in new
chrY	21531838	21534011	chrY:21531838-21534011	7	-	21531838	21531838	16724991	5	48,146,64,66,397,	0,165,397,724,1776,
#Partially deleted in new
chrY	21534878	21549326	chrY:21534878-21549326	1	+	21536891	21549048	0	12	148,113,104,178,153,115,111,111,111,111,89,577,	0,2009,2596,5719,7812,9975,11045,11597,12142,13174,13371,13871,
#Partially deleted in new
chrY	21534903	21549326	chrY:21534903-21549326	0	+	21536891	21542723	789624	11	123,113,104,153,115,111,111,111,111,89,577,	0,1984,2571,7787,9950,11020,11572,12117,13149,13346,13846,
#Deleted in new
chrY	21555851	21558070	chrY:21555851-21558070	7	-	21555851	21555851	16724991	4	50,127,60,386,	0,421,744,1833,
#Deleted in new
chrY	21631682	21632015	chrY:21631682-21632015	7	-	21631682	21631682	16724991	1	333,	0,
#Deleted in new
chrY	21637474	21639041	chrY:21637474-21639041	7	-	21637474	21637474	16724991	1	1567,	0,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrY	21661925	21674008	chrY:21661925-21674008	7	+	21661925	21661925	16724991	6	217,215,178,127,904,125,	0,2837,5173,8158,10644,11958,
#Partially deleted in new
chrY	21677245	21681118	chrY:21677245-21681118	7	-	21677245	21677245	16724991	3	190,224,86,	0,1754,3787,
#Deleted in new
chrY	21696569	21698220	chrY:21696569-21698220	7	+	21696569	21696569	16724991	1	1651,	0,
#Partially deleted in new
chrY	21817578	21818218	chrY:21817578-21818218	7	-	21817578	21817578	16724991	2	177,141,	0,499,
#Partially deleted in new
chrY	21871330	21873550	chrY:21871330-21873550	7	+	21871330	21871330	16724991	3	387,168,50,	0,1631,2170,
#Partially deleted in new
chrY	21880075	21894501	chrY:21880075-21894501	0	-	21886679	21892513	789624	11	577,89,111,111,111,111,115,153,104,113,123,	0,988,1164,2196,2741,3293,4359,6484,11749,12329,14303,
#Partially deleted in new
chrY	21880075	21894526	chrY:21880075-21894526	3	-	21880353	21892513	789624	12	577,89,111,111,111,111,115,153,178,104,113,148,	0,988,1164,2196,2741,3293,4359,6484,8552,11749,12329,14303,
#Partially deleted in new
chrY	21880307	21894439	chrY:21880307-21894439	1	-	21880353	21892513	789624	11	345,89,111,111,111,115,153,178,104,113,61,	0,756,1964,2509,3061,4127,6252,8320,11517,12097,14071,
#Partially deleted in new
chrY	21895393	21897559	chrY:21895393-21897559	7	+	21895393	21895393	16724991	5	385,85,79,132,42,	0,1382,1711,1875,2124,
#Partially deleted in new
chrY	21903617	21918042	chrY:21903617-21918042	0	-	21910220	21916054	789624	11	577,89,111,111,111,111,115,153,104,113,123,	0,988,1163,2195,2740,3292,4358,6483,11748,12328,14302,
#Partially deleted in new
chrY	21903617	21918067	chrY:21903617-21918067	3	-	21903895	21916054	789624	12	577,89,111,111,111,111,115,153,178,104,113,148,	0,988,1163,2195,2740,3292,4358,6483,8551,11748,12328,14302,
#Partially deleted in new
chrY	21903619	21918032	chrY:21903619-21918032	1	-	21903895	21916054	789624	11	575,89,111,111,111,115,153,178,104,113,113,	0,986,2193,2738,3290,4356,6481,8549,11746,12326,14300,
#Partially deleted in new
chrY	21918934	21921106	chrY:21918934-21921106	7	+	21918934	21918934	16724991	5	394,85,79,144,48,	0,1382,1711,1863,2124,
#Partially deleted in new
chrY	21927520	21937150	chrY:21927520-21937150	7	-	21927520	21927520	16724991	8	299,88,111,115,153,178,104,109,	0,720,890,1870,3992,6080,8964,9521,
#Partially deleted in new
chrY	21940011	21941593	chrY:21940011-21941593	7	+	21940011	21940011	16724991	5	332,39,110,144,76,	0,811,1048,1245,1506,
#Partially deleted in new
chrY	21972312	22005349	chrY:21972312-22005349	7	+	21972312	21972312	16724991	9	107,128,110,616,111,101,152,66,42,	0,1619,2283,4110,5099,24550,31283,32631,32995,
#Partially deleted in new
chrY	22048553	22049347	chrY:22048553-22049347	7	-	22048553	22048553	16724991	2	150,159,	0,635,
#Partially deleted in new
chrY	22049754	22058113	chrY:22049754-22058113	7	-	22049754	22049754	16724991	5	39,129,189,118,221,	0,1755,4242,6217,8138,
#Partially deleted in new
chrY	22064697	22065712	chrY:22064697-22065712	7	+	22064697	22064697	16724991	1	1015,	0,
#Partially deleted in new
chrY	22068819	22069151	chrY:22068819-22069151	7	+	22068819	22068819	16724991	1	332,	0,
#Partially deleted in new
chrY	22071755	22096007	chrY:22071755-22096007	3	-	22072322	22084839	789624	5	826,116,121,87,88,	0,10324,13015,23976,24164,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrY	22071755	22096007	chrY:22071755-22096007	0	-	22073727	22084839	789624	6	826,115,116,121,87,88,	0,1888,10324,13015,23976,24164,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	22100813	22105869	chrY:22100813-22105869	1	-	22100813	22100813	8553170	4	242,265,118,120,	0,1291,2071,4936,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrY	22101691	22147484	chrY:22101691-22147484	3	-	22101691	22101691	8553170	13	678,118,197,86,336,90,354,119,86,223,141,310,201,	0,1193,1855,2172,4058,5860,19592,20376,27673,28067,38258,44948,45592,
#Deleted in new
chrY	22144965	22146831	chrY:22144965-22146831	3	+	22144965	22144965	789624	3	114,138,239,	0,332,1627,
#Partially deleted in new
chrY	22168541	22182948	chrY:22168541-22182948	3	-	22168819	22180969	789624	12	577,89,111,111,111,111,115,153,178,104,113,114,	0,988,1163,2197,2742,3293,4359,6484,8552,11749,12319,14293,
#Partially deleted in new
chrY	22168541	22182982	chrY:22168541-22182982	1	-	22168819	22180969	789624	11	577,89,111,111,111,115,153,178,104,113,148,	0,988,2197,2742,3293,4359,6484,8552,11749,12319,14293,
#Partially deleted in new
chrY	22168541	22182957	chrY:22168541-22182957	0	-	22168541	22168541	8553170	11	577,89,111,111,111,111,115,153,104,113,123,	0,988,1163,2197,2742,3293,4359,6484,11749,12319,14293,
#Deleted in new
chrY	22183849	22186021	chrY:22183849-22186021	7	+	22183849	22183849	16724991	5	394,82,71,144,48,	0,1385,1705,1863,2124,
#Partially deleted in new
chrY	22198428	22203712	chrY:22198428-22203712	7	+	22198428	22198428	16724991	3	108,103,113,	0,511,5171,
#Partially deleted in new
chrY	22209330	22216580	chrY:22209330-22216580	7	+	22209330	22209330	16724991	4	113,71,177,115,	0,626,3094,7135,
#Deleted in new
chrY	22296797	22298876	chrY:22296797-22298876	3	-	22296797	22296797	789624	2	991,571,	0,1508,
#Deleted in new
chrY	22305924	22307951	chrY:22305924-22307951	7	-	22305924	22305924	16724991	3	146,66,392,	0,230,1635,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	22308858	22316205	chrY:22308858-22316205	7	+	22308858	22308858	16724991	4	112,113,104,1713,	0,2001,2536,5634,
#Partially deleted in new
chrY	22310863	22321825	chrY:22310863-22321825	5	+	22310863	22310863	16724991	9	109,104,178,153,115,102,111,89,302,	0,531,3629,5731,7919,9499,9966,10157,10660,
#Deleted in new
chrY	22330451	22332500	chrY:22330451-22332500	7	+	22330451	22330451	16724991	2	573,932,	0,1117,
#Deleted in new
chrY	22400402	22402568	chrY:22400402-22402568	7	-	22400402	22400402	16724991	5	42,144,66,85,394,	0,159,389,699,1772,
#Partially deleted in new
chrY	22403460	22417881	chrY:22403460-22417881	0	+	22403460	22403460	8553170	11	122,113,104,153,115,111,111,111,111,89,577,	0,1983,2564,7784,9947,11017,11568,12113,13147,13344,13844,
#Partially deleted in new
chrY	22403469	22417881	chrY:22403469-22417881	3	+	22405447	22417603	789624	12	113,113,104,178,153,115,111,111,111,111,89,577,	0,1974,2555,5682,7775,9938,11008,11559,12104,13138,13335,13835,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrY	22438939	22484714	chrY:22438939-22484714	3	+	22438939	22438939	789624	13	201,310,141,223,86,119,354,90,336,86,197,118,678,	0,535,7392,17495,18026,25290,25839,39825,41381,43517,43723,44464,45097,
#Deleted in new
chrY	22439592	22441458	chrY:22439592-22441458	3	-	22439592	22439592	789624	3	239,138,114,	0,1396,1752,
#Boundary problem: need 4, got 0, diff 4, mapped 0.0
chrY	22480536	22485592	chrY:22480536-22485592	1	+	22480536	22480536	8553170	4	120,118,265,242,	0,2867,3500,4814,
#Partially deleted in new
chrY	22490396	22514637	chrY:22490396-22514637	3	+	22501564	22514070	789624	5	88,87,121,116,826,	0,189,11116,13812,23415,
#Boundary problem: need 6, got 0, diff 6, mapped 0.0
chrY	22490396	22514637	chrY:22490396-22514637	0	+	22501564	22512668	789624	6	88,87,121,116,115,826,	0,189,11116,13812,22241,23415,
#Deleted in new
chrY	22517241	22517573	chrY:22517241-22517573	7	-	22517241	22517241	16724991	1	332,	0,
#Deleted in new
chrY	22520680	22521695	chrY:22520680-22521695	7	-	22520680	22520680	16724991	1	1015,	0,
#Partially deleted in new
chrY	22528280	22536639	chrY:22528280-22536639	7	+	22528280	22528280	16724991	5	221,119,189,129,39,	0,2023,3928,6475,8320,
#Deleted in new
chrY	22537046	22537849	chrY:22537046-22537849	7	+	22537046	22537046	16724991	2	159,159,	0,644,
#Partially deleted in new
chrY	22580988	22614081	chrY:22580988-22614081	7	-	22580988	22580988	16724991	9	94,67,155,101,111,616,110,130,107,	0,392,1655,8443,27885,28369,30702,31346,32986,
#Deleted in new
chrY	22646030	22646327	chrY:22646030-22646327	7	-	22646030	22646030	16724991	1	297,	0,
#Partially deleted in new
chrY	22649244	22658878	chrY:22649244-22658878	7	+	22649244	22649244	16724991	8	109,104,178,153,115,111,88,298,	0,562,3374,5487,7647,8631,8824,9336,
#Partially deleted in new
chrY	22649290	22654778	chrY:22649290-22654778	4	+	22649290	22649290	16724991	4	63,104,178,47,	0,516,3328,5441,
#Deleted in new
chrY	22670615	22672859	chrY:22670615-22672859	7	-	22670615	22670615	16724991	5	74,60,109,55,402,	0,195,431,755,1842,
#Partially deleted in new
chrY	22762850	22769787	chrY:22762850-22769787	7	-	22762850	22762850	16724991	6	302,89,111,177,102,113,	0,715,885,3747,6312,6824,
#Partially deleted in new
chrY	22851583	22852715	chrY:22851583-22852715	3	+	22851583	22851583	789624	2	60,106,	0,1026,
#Partially deleted in new
chrY	22861111	22861834	chrY:22861111-22861834	7	-	22861111	22861111	16724991	2	161,291,	0,432,
#Partially deleted in new
chrY	22866543	22867756	chrY:22866543-22867756	7	-	22866543	22866543	16724991	1	1213,	0,
#Partially deleted in new
chrY	22936454	22973284	chrY:22936454-22973284	3	+	22936454	22936454	789624	4	161,76,108,1001,	0,27173,29053,35829,
#Partially deleted in new
chrY	22973818	22992376	chrY:22973818-22992376	0	+	22992343	22992376	789624	5	156,69,123,137,74,	0,10329,10750,13938,18484,
#Deleted in new
chrY	22984262	23005465	chrY:22984262-23005465	3	+	22992343	22998268	789624	9	31,123,137,119,118,106,125,125,322,	0,306,3494,8040,10218,13189,13987,20662,20881,
#Deleted in new
chrY	22984286	23005406	chrY:22984286-23005406	0	+	22984286	22984286	8553170	8	7,123,137,119,106,125,130,263,	0,282,3470,8016,13165,13963,20638,20857,
#Deleted in new
chrY	22992343	22998268	chrY:22992343-22998268	1	+	22992343	22998268	789624	4	78,118,106,19,	0,2137,5108,5906,
#Deleted in new
chrY	23017062	23017821	chrY:23017062-23017821	7	+	23017062	23017062	16724991	1	759,	0,
#Partially deleted in new
chrY	23025593	23026663	chrY:23025593-23026663	7	+	23025593	23025593	16724991	2	251,511,	0,559,
#Boundary problem: need 3, got 0, diff 3, mapped 0.0
chrY	23049246	23051195	chrY:23049246-23051195	7	+	23049246	23049246	16724991	3	114,57,1294,	0,433,655,
#Partially deleted in new
chrY	23058029	23059186	chrY:23058029-23059186	7	+	23058029	23058029	16724991	2	300,516,	0,641,
#Partially deleted in new
chrY	23129354	23199094	chrY:23129354-23199094	3	-	23135209	23198800	789624	28	1857,99,35,72,72,72,72,72,72,72,72,72,140,64,52,92,147,140,64,52,92,147,140,64,52,92,147,297,	0,5820,10492,11271,13656,23442,25819,28215,30598,32994,35385,37830,39302,39531,40031,40643,41009,50142,50371,50871,51483,51849,60990,61219,61719,62331,62697,69443,
#Partially deleted in new
chrY	23129361	23199010	chrY:23129361-23199010	1	-	23135209	23198800	8553170	17	1850,99,35,72,72,72,72,72,72,72,72,140,64,52,92,147,213,	0,5813,10485,11264,23435,25812,28208,30591,32987,35378,37823,60983,61212,61712,62324,62690,69436,
#Partially deleted in new
chrY	23129362	23140812	chrY:23129362-23140812	0	-	23129362	23129362	8553170	5	1849,99,72,35,187,	0,5812,8847,10484,11263,
#Partially deleted in new
chrY	23129862	23198923	chrY:23129862-23198923	1	-	23130279	23198800	789624	21	494,61,72,72,72,140,64,52,92,147,140,64,52,92,147,140,64,52,92,147,126,	0,30101,32486,34877,37322,38794,39023,39523,40135,40501,49634,49863,50363,50975,51341,60482,60711,61211,61823,62189,68935,
#Partially deleted in new
chrY	23130709	23199008	chrY:23130709-23199008	1	-	23135209	23198800	789624	16	502,99,35,72,72,72,72,72,72,72,140,64,52,92,147,211,	0,4465,9137,9916,12301,22087,26860,31639,34030,36475,59635,59864,60364,60976,61342,68088,
#Partially deleted in new
chrY	23131003	23198987	chrY:23131003-23198987	1	-	23135209	23198800	789624	21	208,101,33,72,72,72,72,72,72,72,72,72,72,72,72,140,64,52,92,147,190,	0,4171,6477,7206,9622,12007,21793,24170,26566,28949,31345,33736,36181,47017,57865,59341,59570,60070,60682,61048,67794,
#Partially deleted in new
chrY	23219433	23291356	chrY:23219433-23291356	1	+	23219740	23285501	789624	19	310,147,92,52,64,140,72,72,72,72,72,72,72,72,72,72,35,99,1857,	0,6910,7331,7983,8471,8624,10164,12607,14998,17394,22172,26952,29329,34107,36484,60579,61395,66004,70066,
#Partially deleted in new
chrY	23219433	23291356	chrY:23219433-23291356	1	+	23219740	23285501	8553170	17	310,147,92,52,64,140,72,72,72,72,72,72,72,72,35,99,1857,	0,6910,7331,7983,8471,8624,10164,12607,14998,17394,19776,22172,29329,60579,61395,66004,70066,
#Partially deleted in new
chrY	23219446	23291356	chrY:23219446-23291356	1	+	23219740	23285501	789624	23	297,147,92,52,64,140,72,72,72,72,72,72,72,72,72,72,72,72,72,72,35,99,1857,	0,6897,7318,7970,8458,8611,10151,12594,14985,22159,24543,34094,36471,46260,48644,51029,53413,55797,58181,60566,61382,65991,70053,
#Partially deleted in new
chrY	23219456	23291356	chrY:23219456-23291356	1	+	23219740	23285501	789624	16	287,147,92,52,64,140,72,72,72,72,72,72,72,35,99,1857,	0,6887,7308,7960,8448,8601,10141,12584,19753,46250,48634,51019,60556,61372,65981,70043,
#Partially deleted in new
chrY	23219456	23291356	chrY:23219456-23291356	3	+	23219740	23285501	789624	23	287,147,92,52,64,140,72,72,72,72,72,72,72,72,72,72,72,72,72,72,35,99,1857,	0,6887,7308,7960,8448,8601,10141,12584,14975,17371,19753,22149,29306,46250,48634,51019,53403,55787,58171,60556,61372,65981,70043,
#Partially deleted in new
chrY	23219456	23291356	chrY:23219456-23291356	1	+	23219740	23285501	789624	24	287,147,92,52,64,140,72,72,72,72,72,72,72,72,72,72,72,72,72,72,72,35,99,1857,	0,6887,7308,7960,8448,8601,10141,12584,14975,17371,19753,22149,29306,36461,46250,48634,51019,53403,55787,58171,60556,61372,65981,70043,
#Partially deleted in new
chrY	23219456	23291356	chrY:23219456-23291356	1	+	23219740	23285501	789624	21	287,147,92,52,64,140,72,72,72,72,72,72,72,72,72,72,72,72,35,99,1857,	0,6887,7308,7960,8448,8601,10141,12584,14975,17371,19753,22149,24533,26929,29306,34084,36461,60556,61372,65981,70043,
#Partially deleted in new
chrY	23219474	23291352	chrY:23219474-23291352	1	+	23219740	23285501	789624	28	269,147,92,52,64,140,72,72,72,72,72,72,72,72,72,72,72,72,72,72,72,72,72,72,72,35,99,1853,	0,6869,7290,7942,8430,8583,10123,12566,14957,17353,19735,22131,24515,26911,29288,31670,34066,36443,46232,48616,51001,53385,55769,58153,60538,61354,65963,70025,
#Partially deleted in new
chrY	23219547	23289999	chrY:23219547-23289999	1	+	23219740	23285501	789624	24	196,147,92,52,64,140,72,72,72,72,72,72,72,72,72,72,72,72,72,72,72,35,99,500,	0,6796,7217,7869,8357,8510,10050,12493,14884,22058,24442,26838,29215,36370,46159,48543,50928,53312,55696,58080,60465,61281,65890,69952,
#Partially deleted in new
chrY	23379483	23392697	chrY:23379483-23392697	7	+	23379483	23379483	16724991	5	90,204,190,113,42,	0,9507,11681,11959,13172,
#Deleted in new
chrY	23423098	23423236	chrY:23423098-23423236	3	-	23423098	23423098	8553170	1	138,	0,
#Partially deleted in new
chrY	23462464	23472280	chrY:23462464-23472280	7	+	23462464	23462464	16724991	2	71,127,	0,9689,
#Deleted in new
chrY	23523320	23525369	chrY:23523320-23525369	7	+	23523320	23523320	16724991	4	402,57,124,144,	0,1432,1689,1905,
#Partially deleted in new
chrY	23537307	23546942	chrY:23537307-23546942	7	-	23537307	23537307	16724991	8	299,88,111,115,153,178,104,109,	0,723,893,1873,3995,6083,8969,9526,
#Partially deleted in new
chrY	23541408	23546896	chrY:23541408-23546896	4	-	23541408	23541408	16724991	4	47,178,104,63,	0,1982,4868,5425,
#Deleted in new
chrY	23549808	23551385	chrY:23549808-23551385	7	+	23549808	23549808	16724991	5	342,39,75,140,76,	0,806,1074,1244,1501,
#Partially deleted in new
chrY	23581594	23614640	chrY:23581594-23614640	7	+	23581594	23581594	16724991	9	107,125,110,616,105,101,155,82,32,	0,1628,2289,4116,5105,24555,31290,32633,33014,
#Partially deleted in new
chrY	23657838	23659058	chrY:23657838-23659058	7	-	23657838	23657838	16724991	3	159,160,84,	0,644,1136,
#Partially deleted in new
chrY	23659465	23667822	chrY:23659465-23667822	7	-	23659465	23659465	16724991	5	39,130,189,116,221,	0,1754,4242,6217,8136,
#Partially deleted in new
chrY	23674378	23675392	chrY:23674378-23675392	7	+	23674378	23674378	16724991	1	1014,	0,
#Partially deleted in new
chrY	23678503	23678835	chrY:23678503-23678835	7	+	23678503	23678503	16724991	1	332,	0,
#Partially deleted in new
chrY	23681439	23694579	chrY:23681439-23694579	7	-	23681439	23681439	16724991	3	826,116,121,	0,10317,13019,
#Partially deleted in new
chrY	23682006	23694527	chrY:23682006-23694527	5	-	23682006	23682006	16724991	3	259,116,69,	0,9750,12452,
#Partially deleted in new
chrY	23715921	23726808	chrY:23715921-23726808	7	-	23715921	23715921	16724991	2	780,336,	0,10551,
#Partially deleted in new
chrY	23734192	23736249	chrY:23734192-23736249	7	+	23734192	23734192	16724991	2	251,192,	0,1865,
#Partially deleted in new
chrY	23740257	23746693	chrY:23740257-23746693	7	-	23740257	23740257	16724991	5	96,159,30,150,128,	0,478,847,1026,6308,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	23740941	23741105	chrY:23740941-23741105	3	-	23740941	23740941	8553170	1	164,	0,
#Partially deleted in new
chrY	23751187	23751760	chrY:23751187-23751760	7	+	23751187	23751187	16724991	1	573,	0,
#Partially deleted in new
chrY	23762837	23765583	chrY:23762837-23765583	7	-	23762837	23762837	16724991	3	86,145,112,	0,535,2634,
#Partially deleted in new
chrY	23771231	23798150	chrY:23771231-23798150	7	+	23771231	23771231	16724991	11	98,202,69,31,124,135,146,107,119,74,72,	0,1516,12408,12561,13382,17340,17819,21011,23766,25671,26847,
#Partially deleted in new
chrY	23808820	23809059	chrY:23808820-23809059	7	-	23808820	23808820	16724991	1	239,	0,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	23855521	23857091	chrY:23855521-23857091	7	-	23855521	23855521	16724991	1	1570,	0,
#Deleted in new
chrY	23917240	23917723	chrY:23917240-23917723	7	-	23917240	23917240	16724991	1	483,	0,
#Deleted in new
chrY	23919904	23921510	chrY:23919904-23921510	7	+	23919904	23919904	16724991	2	220,260,	0,1346,
#Partially deleted in new
chrY	23934952	23940101	chrY:23934952-23940101	7	+	23934952	23934952	16724991	4	39,224,263,191,	0,1713,3060,4958,
#Deleted in new
chrY	23936726	23941622	chrY:23936726-23941622	3	-	23936726	23936726	789624	3	105,135,104,	0,2459,4792,
#Partially deleted in new
chrY	23945926	23952293	chrY:23945926-23952293	7	-	23945926	23945926	16724991	4	96,188,154,132,	0,477,1020,6235,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	23946617	23946771	chrY:23946617-23946771	3	-	23946617	23946617	8553170	1	154,	0,
#Partially deleted in new
chrY	23956568	23960218	chrY:23956568-23960218	7	+	23956568	23956568	16724991	2	228,369,	0,3281,
#Partially deleted in new
chrY	23967563	23970694	chrY:23967563-23970694	7	-	23967563	23967563	16724991	3	79,132,112,	0,523,3019,
#Partially deleted in new
chrY	23972779	23995081	chrY:23972779-23995081	7	+	23972779	23972779	16724991	11	99,200,68,33,134,136,109,113,74,92,149,	0,1414,3821,3974,11512,11984,15164,17379,19268,20446,22153,
#Deleted in new
chrY	24006910	24007237	chrY:24006910-24007237	7	-	24006910	24006910	16724991	1	327,	0,
#Deleted in new
chrY	24045228	24047969	chrY:24045228-24047969	3	-	24045603	24047688	0	2	448,1873,	0,868,
#Deleted in new
chrY	24045792	24048019	chrY:24045792-24048019	1	-	24046065	24047688	0	1	2227,	0,
#Partially deleted in new
chrY	24049877	24051487	chrY:24049877-24051487	7	-	24049877	24049877	16724991	2	1216,66,	0,1544,
#Deleted in new
chrY	24077798	24079812	chrY:24077798-24079812	7	+	24077798	24077798	16724991	2	222,190,	0,1824,
#Partially deleted in new
chrY	24081703	24090346	chrY:24081703-24090346	7	-	24081703	24081703	16724991	5	120,129,190,220,222,	0,2124,4068,6056,8421,
#Partially deleted in new
chrY	24104106	24106018	chrY:24104106-24106018	7	+	24104106	24104106	16724991	2	194,1415,	0,497,
#Partially deleted in new
chrY	24142357	24157843	chrY:24142357-24157843	7	+	24142357	24142357	16724991	6	138,85,94,59,49,96,	0,2498,3672,8049,14613,15390,
#Partially deleted in new
chrY	24168186	24174494	chrY:24168186-24174494	7	+	24168186	24168186	16724991	9	84,120,60,81,75,569,61,115,133,	0,1727,2469,2714,3451,3914,4750,5851,6175,
#Deleted in new
chrY	24179315	24183505	chrY:24179315-24183505	7	-	24179315	24179315	16724991	3	53,205,232,	0,3502,3958,
#Deleted in new
chrY	24182476	24183071	chrY:24182476-24183071	7	+	24182476	24182476	16724991	1	595,	0,
#Partially deleted in new
chrY	24183433	24187231	chrY:24183433-24187231	3	-	24183433	24183433	8553170	2	72,723,	0,3075,
#Deleted in new
chrY	24186508	24191870	chrY:24186508-24191870	7	-	24186508	24186508	16724991	2	3560,164,	0,5198,
#Partially deleted in new
chrY	24196517	24206132	chrY:24196517-24206132	7	-	24196517	24196517	16724991	3	162,150,85,	0,7959,9530,
#Partially deleted in new
chrY	24209566	24215581	chrY:24209566-24215581	7	-	24209566	24209566	16724991	13	57,147,96,93,189,89,75,58,351,90,81,60,120,	0,158,388,566,748,1192,1701,3132,3488,4226,4957,5222,5895,
#Partially deleted in new
chrY	24209966	24214831	chrY:24209966-24214831	4	-	24209966	24209966	16724991	9	84,93,189,89,75,58,350,79,43,	0,166,348,792,1301,2732,3088,4557,4822,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	24210957	24211216	chrY:24210957-24211216	3	-	24210957	24210957	8553170	1	259,	0,
#Partially deleted in new
chrY	24232825	24238984	chrY:24232825-24238984	7	-	24232825	24232825	16724991	2	105,102,	0,6057,
#Deleted in new
chrY	24276244	24277026	chrY:24276244-24277026	7	+	24276244	24276244	16724991	1	782,	0,
#Deleted in new
chrY	24278336	24281140	chrY:24278336-24281140	7	-	24278336	24278336	16724991	3	127,422,1779,	0,537,1025,
#Partially deleted in new
chrY	24278680	24291346	chrY:24278680-24291346	7	+	24278680	24278680	16724991	3	207,169,78,	0,4381,12588,
#Deleted in new
chrY	24362334	24362409	chrY:24362334-24362409	7	-	24362334	24362334	16724991	1	75,	0,
#Partially deleted in new
chrY	24396603	24403526	chrY:24396603-24403526	7	-	24396603	24396603	16724991	6	302,89,111,182,102,109,	0,715,885,3732,6302,6814,
#Partially deleted in new
chrY	24485331	24486463	chrY:24485331-24486463	3	+	24485331	24485331	789624	2	60,106,	0,1026,
#Partially deleted in new
chrY	24494708	24495583	chrY:24494708-24495583	7	-	24494708	24494708	16724991	2	298,276,	0,599,
#Deleted in new
chrY	24500262	24501505	chrY:24500262-24501505	7	-	24500262	24500262	16724991	1	1243,	0,
#Partially deleted in new
chrY	24570201	24607025	chrY:24570201-24607025	3	+	24570201	24570201	789624	4	161,76,108,1001,	0,27167,29047,35823,
#Partially deleted in new
chrY	24607559	24626117	chrY:24607559-24626117	0	+	24626084	24626117	789624	5	156,69,123,137,74,	0,10329,10750,13938,18484,
#Deleted in new
chrY	24618003	24639207	chrY:24618003-24639207	3	+	24626084	24632010	789624	9	31,123,137,119,118,106,125,125,322,	0,306,3494,8040,10218,13190,13988,20663,20882,
#Deleted in new
chrY	24618027	24639148	chrY:24618027-24639148	0	+	24618027	24618027	8553170	8	7,123,137,119,106,125,130,263,	0,282,3470,8016,13166,13964,20639,20858,
#Deleted in new
chrY	24626084	24632010	chrY:24626084-24632010	1	+	24626084	24632010	789624	4	78,118,106,19,	0,2137,5109,5907,
#Deleted in new
chrY	24650807	24651534	chrY:24650807-24651534	7	+	24650807	24650807	16724991	1	727,	0,
#Partially deleted in new
chrY	24659336	24660406	chrY:24659336-24660406	7	+	24659336	24659336	16724991	2	231,520,	0,550,
#Deleted in new
chrY	24683656	24684935	chrY:24683656-24684935	7	+	24683656	24683656	16724991	1	1279,	0,
#Partially deleted in new
chrY	24691790	24692932	chrY:24691790-24692932	7	+	24691790	24691790	16724991	2	285,516,	0,626,
#Partially deleted in new
chrY	24763068	24813469	chrY:24763068-24813469	1	-	24768933	24813185	789624	16	1857,99,35,72,72,72,72,72,72,72,140,64,52,92,147,287,	0,5830,10501,11281,21068,25825,30581,35354,37744,40187,41659,41888,42388,43000,43366,50114,
#Partially deleted in new
chrY	24763068	24813479	chrY:24763068-24813479	3	-	24768933	24813185	789624	19	1857,99,35,72,72,72,72,72,72,72,72,72,72,140,64,52,92,147,297,	0,5830,10501,11281,21068,23445,25825,28202,30581,32958,35354,37744,40187,41659,41888,42388,43000,43366,50114,
#Partially deleted in new
chrY	24763068	24813492	chrY:24763068-24813492	1	-	24768933	24813185	789624	17	1857,99,35,72,72,72,72,72,72,72,72,140,64,52,92,147,310,	0,5830,10501,11281,25825,28202,30581,32958,35354,37744,40187,41659,41888,42388,43000,43366,50114,
#Partially deleted in new
chrY	24833842	24907040	chrY:24833842-24907040	1	+	24834126	24901175	789624	16	287,147,92,52,64,140,72,72,72,72,72,72,72,35,99,1857,	0,6888,7309,7961,8449,8602,20990,23433,30603,49921,52306,54691,61845,62662,67269,71341,
#Partially deleted in new
chrY	24833916	24907036	chrY:24833916-24907036	1	+	24834126	24901175	789624	24	213,147,92,52,64,140,147,92,52,64,140,72,72,72,72,72,72,72,72,72,72,35,99,1853,	0,6814,7235,7887,8375,8528,17662,18083,18735,19223,19376,20916,23359,25749,28145,30529,32925,35302,37682,40059,61771,62588,67195,71267,
#Partially deleted in new
chrY	24833916	24907036	chrY:24833916-24907036	1	+	24834126	24901175	789624	17	213,147,92,52,64,140,72,72,72,72,72,72,72,72,35,99,1853,	0,6814,7235,7887,8375,8528,20916,23359,25749,28145,30529,32925,35302,61771,62588,67195,71267,
#Partially deleted in new
chrY	24833933	24905683	chrY:24833933-24905683	1	+	24834126	24901175	789624	24	196,147,92,52,64,140,72,72,72,72,72,72,72,72,72,72,72,72,72,72,72,35,99,500,	0,6797,7218,7870,8358,8511,20899,23342,25732,28128,30512,32908,35285,37665,40042,49830,52215,54600,56984,59369,61754,62571,67178,71250,
#Partially deleted in new
chrY	24833939	24905391	chrY:24833939-24905391	1	+	24834126	24901175	789624	21	190,147,92,52,64,140,72,72,72,72,72,72,72,72,72,72,72,72,35,99,208,	0,6791,7212,7864,8352,8505,20893,23336,25726,28122,30506,32902,35279,37659,40036,49824,52209,61748,62565,67172,71244,
#Partially deleted in new
chrY	24834126	24905240	chrY:24834126-24905240	3	+	24834126	24901175	789624	26	3,147,92,52,64,140,147,92,52,64,140,72,72,72,72,72,72,72,72,72,72,72,72,35,99,57,	0,6604,7025,7677,8165,8318,17452,17873,18525,19013,19166,20706,23149,25539,27935,30319,32715,35092,37472,39849,49637,59176,61561,62378,66985,71057,
#Partially deleted in new
chrY	24834126	24905240	chrY:24834126-24905240	1	+	24834126	24901175	789624	23	3,147,92,52,64,140,147,92,52,64,140,72,72,72,72,72,72,72,72,72,35,99,57,	0,6604,7025,7677,8165,8318,17452,17873,18525,19013,19166,20706,23149,25539,27935,30319,32715,35092,59176,61561,62378,66985,71057,
#Partially deleted in new
chrY	24977175	24978317	chrY:24977175-24978317	7	-	24977175	24977175	16724991	2	524,267,	0,875,
#Deleted in new
chrY	24985200	24986476	chrY:24985200-24986476	7	-	24985200	24985200	16724991	1	1276,	0,
#Partially deleted in new
chrY	25009699	25010769	chrY:25009699-25010769	7	-	25009699	25009699	16724991	2	522,227,	0,843,
#Deleted in new
chrY	25018498	25019303	chrY:25018498-25019303	7	-	25018498	25018498	16724991	1	805,	0,
#Deleted in new
chrY	25030900	25052104	chrY:25030900-25052104	3	-	25038097	25044023	789624	9	322,125,125,106,118,119,137,123,31,	0,416,7091,7908,10868,13045,17573,20775,21173,
#Deleted in new
chrY	25030959	25052080	chrY:25030959-25052080	0	-	25030959	25030959	8553170	8	263,130,125,106,119,137,123,7,	0,352,7032,7849,12986,17514,20716,21114,
#Deleted in new
chrY	25038097	25044023	chrY:25038097-25044023	1	-	25038097	25044023	789624	4	19,106,118,78,	0,711,3671,5848,
#Partially deleted in new
chrY	25043990	25062548	chrY:25043990-25062548	0	-	25043990	25044023	789624	5	74,137,123,69,156,	0,4483,7685,8160,18402,
#Partially deleted in new
chrY	25063082	25099892	chrY:25063082-25099892	3	-	25063082	25063082	789624	4	1001,108,76,161,	0,7651,9563,36649,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	25168598	25169841	chrY:25168598-25169841	7	+	25168598	25168598	16724991	1	1243,	0,
#Partially deleted in new
chrY	25174519	25175237	chrY:25174519-25175237	7	+	25174519	25174519	16724991	2	273,142,	0,576,
#Partially deleted in new
chrY	25183642	25184773	chrY:25183642-25184773	3	-	25183642	25183642	789624	2	106,60,	0,1071,
#Partially deleted in new
chrY	25266583	25273531	chrY:25266583-25273531	7	+	25266583	25266583	16724991	6	113,102,182,111,89,315,	0,523,3013,5939,6131,6633,
#Deleted in new
chrY	25307728	25307803	chrY:25307728-25307803	7	+	25307728	25307728	16724991	1	75,	0,
#Partially deleted in new
chrY	25378670	25391610	chrY:25378670-25391610	1	-	25378670	25378670	8553170	4	145,59,169,350,	0,149,8246,12590,
#Deleted in new
chrY	25388991	25391811	chrY:25388991-25391811	7	+	25388991	25388991	16724991	2	2283,127,	0,2693,
#Deleted in new
chrY	25393153	25394056	chrY:25393153-25394056	7	-	25393153	25393153	16724991	1	903,	0,
#Partially deleted in new
chrY	25431155	25437315	chrY:25431155-25437315	7	+	25431155	25431155	16724991	2	102,105,	0,6055,
#Partially deleted in new
chrY	25454560	25460572	chrY:25454560-25460572	7	+	25454560	25454560	16724991	14	120,60,79,350,58,70,161,75,89,189,93,91,156,62,	0,733,979,2177,2825,3913,4002,4239,4734,5078,5356,5531,5704,5950,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	25458925	25459184	chrY:25458925-25459184	3	+	25458925	25458925	8553170	1	259,	0,
#Partially deleted in new
chrY	25464005	25473621	chrY:25464005-25473621	7	+	25464005	25464005	16724991	3	85,150,162,	0,1506,9454,
#Deleted in new
chrY	25478268	25483630	chrY:25478268-25483630	7	+	25478268	25478268	16724991	2	164,3560,	0,1802,
#Partially deleted in new
chrY	25482907	25486705	chrY:25482907-25486705	3	+	25482907	25482907	789624	2	723,72,	0,3726,
#Deleted in new
chrY	25486639	25487322	chrY:25486639-25487322	7	+	25486639	25486639	16724991	2	226,213,	0,470,
#Deleted in new
chrY	25487283	25487662	chrY:25487283-25487662	7	-	25487283	25487283	16724991	1	379,	0,
#Partially deleted in new
chrY	25495650	25501958	chrY:25495650-25501958	7	-	25495650	25495650	16724991	9	132,124,71,570,57,81,60,120,84,	0,341,1487,1825,2800,3513,3779,4461,6224,
#Partially deleted in new
chrY	25512300	25527786	chrY:25512300-25527786	7	-	25512300	25512300	16724991	6	96,49,59,90,85,138,	0,824,7378,11720,12903,15348,
#Partially deleted in new
chrY	25564121	25566033	chrY:25564121-25566033	7	-	25564121	25564121	16724991	2	1442,171,	0,1741,
#Partially deleted in new
chrY	25579789	25588444	chrY:25579789-25588444	7	+	25579789	25579789	16724991	5	206,224,179,90,130,	0,2369,4397,6388,8525,
#Deleted in new
chrY	25590322	25592345	chrY:25590322-25592345	7	-	25590322	25590322	16724991	2	191,230,	0,1793,
#Partially deleted in new
chrY	25618643	25620253	chrY:25618643-25620253	7	+	25618643	25618643	16724991	2	66,1213,	0,397,
#Deleted in new
chrY	25622161	25624902	chrY:25622161-25624902	3	+	25622442	25624527	0	2	1873,448,	0,2293,
#Deleted in new
chrY	25622161	25624338	chrY:25622161-25624338	1	+	25622442	25624065	0	1	2177,	0,
#Deleted in new
chrY	25662899	25663226	chrY:25662899-25663226	7	+	25662899	25662899	16724991	1	327,	0,
#Partially deleted in new
chrY	25675059	25697346	chrY:25675059-25697346	7	-	25675059	25675059	16724991	11	149,92,74,117,106,136,133,59,69,199,98,	0,1763,2960,4810,7033,10184,10659,18269,18413,20690,22189,
#Partially deleted in new
chrY	25699450	25702562	chrY:25699450-25702562	7	+	25699450	25699450	16724991	3	93,135,80,	0,2456,3032,
#Partially deleted in new
chrY	25709907	25713557	chrY:25709907-25713557	7	-	25709907	25709907	16724991	2	363,234,	0,3416,
#Partially deleted in new
chrY	25723015	25724186	chrY:25723015-25724186	7	+	25723015	25723015	16724991	3	166,194,95,	0,501,1076,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	25723341	25723495	chrY:25723341-25723495	3	+	25723341	25723341	8553170	1	154,	0,
#Partially deleted in new
chrY	25728489	25733388	chrY:25728489-25733388	3	+	25728489	25728489	789624	3	104,135,105,	0,2302,4794,
#Partially deleted in new
chrY	25730010	25735160	chrY:25730010-25735160	7	-	25730010	25730010	16724991	4	193,263,222,37,	0,1829,3216,5113,
#Partially deleted in new
chrY	25748595	25750206	chrY:25748595-25750206	7	-	25748595	25748595	16724991	2	267,218,	0,1393,
#Partially deleted in new
chrY	25752387	25752870	chrY:25752387-25752870	7	+	25752387	25752387	16724991	1	483,	0,
#Partially deleted in new
chrY	25813012	25814566	chrY:25813012-25814566	7	+	25813012	25813012	16724991	1	1554,	0,
#Partially deleted in new
chrY	25860942	25861268	chrY:25860942-25861268	7	+	25860942	25860942	16724991	1	326,	0,
#Partially deleted in new
chrY	25871930	25898653	chrY:25871930-25898653	7	-	25871930	25871930	16724991	8	72,74,119,106,148,135,206,99,	0,1174,3034,5800,8952,9444,25200,26624,
#Partially deleted in new
chrY	25904517	25907250	chrY:25904517-25907250	7	+	25904517	25904517	16724991	3	93,145,93,	0,2047,2640,
#Partially deleted in new
chrY	25918322	25918895	chrY:25918322-25918895	7	-	25918322	25918322	16724991	1	573,	0,
#Partially deleted in new
chrY	25923387	25929826	chrY:25923387-25929826	7	+	25923387	25923387	16724991	5	132,138,37,158,93,	0,5274,5555,5806,6346,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	25928978	25929142	chrY:25928978-25929142	3	+	25928978	25928978	8553170	1	164,	0,
#Partially deleted in new
chrY	25933832	25935881	chrY:25933832-25935881	7	-	25933832	25933832	16724991	2	183,249,	0,1800,
#Partially deleted in new
chrY	25943267	25954152	chrY:25943267-25954152	7	+	25943267	25943267	16724991	2	336,780,	0,10105,
#Partially deleted in new
chrY	25975548	25988069	chrY:25975548-25988069	7	+	25975548	25975548	16724991	3	69,116,259,	0,2655,12262,
#Partially deleted in new
chrY	25991240	25991572	chrY:25991240-25991572	7	-	25991240	25991240	16724991	1	332,	0,
#Partially deleted in new
chrY	25994683	25995697	chrY:25994683-25995697	7	-	25994683	25994683	16724991	1	1014,	0,
#Partially deleted in new
chrY	26002253	26008856	chrY:26002253-26008856	7	+	26002253	26002253	16724991	4	223,119,190,129,	0,2021,3926,6474,
#Partially deleted in new
chrY	26011434	26012237	chrY:26011434-26012237	7	+	26011434	26011434	16724991	2	159,159,	0,644,
#Partially deleted in new
chrY	26055778	26088493	chrY:26055778-26088493	7	-	26055778	26055778	16724991	8	71,164,97,97,620,113,125,105,	0,1252,8054,27505,27971,30308,30957,32610,
#Partially deleted in new
chrY	26123673	26133308	chrY:26123673-26133308	7	+	26123673	26123673	16724991	8	109,104,178,153,115,111,88,299,	0,562,3374,5487,7647,8631,8824,9336,
#Partially deleted in new
chrY	26123719	26129207	chrY:26123719-26129207	4	+	26123719	26123719	16724991	4	63,104,178,47,	0,516,3328,5441,
#Partially deleted in new
chrY	26198330	26208148	chrY:26198330-26208148	7	-	26198330	26198330	16724991	2	127,73,	0,9745,
#Deleted in new
chrY	26244350	26244573	chrY:26244350-26244573	7	-	26244350	26244350	16724991	1	223,	0,
#Deleted in new
chrY	26247383	26247521	chrY:26247383-26247521	3	+	26247383	26247383	8553170	1	138,	0,
#Partially deleted in new
chrY	26277922	26354418	chrY:26277922-26354418	7	-	26277922	26277922	16724991	13	42,113,190,204,90,183,140,80,74,145,160,119,131,	0,1142,1343,3503,13125,51023,55006,55802,57723,59454,60912,70537,76365,
#Boundary problem: need 1, got 0, diff 1, mapped 0.0
chrY	26360988	26361092	chrY:26360988-26361092	3	+	26360988	26360988	8553170	1	104,	0,
#Partially deleted in new
chrY	26400610	26401230	chrY:26400610-26401230	7	+	26400610	26400610	16724991	2	51,272,	0,348,
#Partially deleted in new
chrY	26409814	26420535	chrY:26409814-26420535	7	+	26409814	26409814	16724991	5	131,115,174,97,142,	0,4233,4514,9029,10579,
#Deleted in new
chrY	26453981	26454092	chrY:26453981-26454092	7	+	26453981	26453981	16724991	1	111,	0,
#Partially deleted in new
chrY	26508212	26579690	chrY:26508212-26579690	7	+	26508212	26508212	16724991	20	54,54,54,60,51,162,120,100,63,65,65,75,89,61,82,106,80,91,71,102,	0,6843,7442,17638,24571,26110,32757,34530,34776,35571,48775,49661,49834,56105,57965,61647,63670,67711,69211,71376,
#Partially deleted in new
chrY	26549424	26549743	chrY:26549424-26549743	7	+	26549424	26549424	16724991	1	319,	0,
#Partially deleted in new
chrY	26586641	26591601	chrY:26586641-26591601	7	-	26586641	26586641	16724991	3	125,163,54,	0,756,4906,
#Boundary problem: need 13, got 0, diff 13, mapped 0.0
chrY	26594850	26634652	chrY:26594850-26634652	7	-	26594850	26594850	16724991	13	195,132,95,809,238,123,97,81,80,167,103,87,130,	0,6040,16862,19303,20443,26922,27661,28735,33092,33420,35796,38494,39672,
#Deleted in new
chrY	26626519	26627159	chrY:26626519-26627159	7	-	26626519	26626519	16724991	1	640,	0,
#Deleted in new
chrY	56855243	56855488	chrY:56855243-56855488	7	+	56855243	56855243	16724991	1	245,	0,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	56954331	56968979	chrY:56954331-56968979	3	+	56960391	56961258	789624	2	325,8694,	0,5954,
#Partially deleted in new
chrY	57015104	57016096	chrY:57015104-57016096	7	-	57015104	57015104	16724991	1	992,	0,
#Partially deleted in new
chrY	57062155	57062405	chrY:57062155-57062405	7	+	57062155	57062155	16724991	1	250,	0,
#Partially deleted in new
chrY	57067812	57130289	chrY:57067812-57130289	3	+	57075986	57128471	0	8	156,155,58,138,91,68,93,1887,	0,8165,14330,16819,19204,38520,58408,60590,
#Partially deleted in new
chrY	57067877	57128429	chrY:57067877-57128429	0	+	57067877	57067877	8553170	8	91,176,58,138,91,68,93,27,	0,8100,14265,16754,19139,38455,58343,60525,
#Partially deleted in new
chrY	57067879	57128464	chrY:57067879-57128464	0	+	57075986	57084665	789624	7	89,155,138,91,68,93,62,	0,8098,16752,19137,38453,58341,60523,
#Partially deleted in new
chrY	57067891	57126310	chrY:57067891-57126310	0	+	57067891	57067891	8553170	7	77,151,58,138,91,68,90,	0,8086,14251,16740,19125,38441,58329,
#Partially deleted in new
chrY	57067894	57130289	chrY:57067894-57130289	1	+	57075986	57128659	0	7	74,155,58,138,91,93,1887,	0,8083,14248,16737,19122,58326,60508,
#Partially deleted in new
chrY	57067897	57128509	chrY:57067897-57128509	1	+	57075986	57128471	0	7	71,90,138,91,68,93,107,	0,8080,16734,19119,38435,58323,60505,
#Deleted in new
chrY	57165511	57165845	chrY:57165511-57165845	7	-	57165511	57165511	16724991	1	334,	0,
#Partially deleted in new
chrY	57171889	57172769	chrY:57171889-57172769	7	-	57171889	57171889	16724991	1	880,	0,
#Partially deleted in new
chrY	57184100	57197128	chrY:57184100-57197128	3	+	57184279	57196929	789624	9	207,114,112,179,146,202,106,85,793,	0,5325,5868,6096,6839,7697,8502,9942,12235,
#Partially deleted in new
chrY	57184225	57197337	chrY:57184225-57197337	1	+	57184263	57196372	789624	9	82,101,138,112,172,117,202,106,1002,	0,3702,5176,5743,5978,6743,7572,8377,12110,
#Partially deleted in new
chrY	57184253	57189490	chrY:57184253-57189490	0	+	57184253	57184253	8553170	3	54,179,65,	0,3596,5172,
#Partially deleted in new
chrY	57190737	57208756	chrY:57190737-57208756	3	+	57190737	57190737	8553170	4	348,85,102,238,	0,3305,17473,17781,
#Deleted in new
chrY	57192633	57194566	chrY:57192633-57194566	0	+	57192633	57192633	8553170	3	75,85,148,	0,1409,1785,
#Boundary problem: need 2, got 0, diff 2, mapped 0.0
chrY	57201142	57203357	chrY:57201142-57203357	3	-	57201142	57201142	8553170	2	878,176,	0,2039,
#Deleted in new
chrY	57207345	57208935	chrY:57207345-57208935	5	+	57207345	57207345	16724991	5	323,58,99,147,93,	0,680,868,1173,1497,
#Deleted in new
chrY	57207480	57211894	chrY:57207480-57211894	5	+	57207480	57207480	16724991	10	188,112,147,137,136,202,159,153,69,134,	0,720,1038,1362,1738,2051,2341,3159,4071,4280,
#Deleted in new
chrY	57207847	57212183	chrY:57207847-57212183	6	+	57207847	57207847	16724991	2	1882,2362,	0,1974,
#Deleted in new
chrY	57207964	57209727	chrY:57207964-57209727	4	+	57207964	57207964	16724991	4	348,147,137,196,	0,554,878,1567,
#Deleted in new
chrY	57208196	57209855	chrY:57208196-57209855	4	+	57208196	57208196	16724991	6	116,147,146,136,202,34,	0,322,637,1022,1335,1625,
#Deleted in new
chrY	57208207	57212186	chrY:57208207-57212186	4	+	57208207	57208207	16724991	8	105,147,512,198,159,153,69,426,	0,311,635,1324,1614,2432,3344,3553,
#Deleted in new
chrY	57208207	57212230	chrY:57208207-57212230	5	+	57208207	57208207	16724991	8	105,147,521,202,159,153,69,470,	0,311,626,1324,1614,2432,3344,3553,
#Deleted in new
chrY	57208207	57212186	chrY:57208207-57212186	4	+	57208207	57208207	16724991	6	105,147,512,198,1799,426,	0,311,635,1324,1614,3553,
#Deleted in new
chrY	57208518	57209612	chrY:57208518-57209612	4	+	57208518	57208518	16724991	2	461,81,	0,1013,
#Deleted in new
chrY	57208518	57209909	chrY:57208518-57209909	4	+	57208518	57208518	16724991	5	147,217,136,198,88,	0,324,700,1013,1303,
#Deleted in new
chrY	57208518	57212183	chrY:57208518-57212183	4	+	57208518	57208518	16724991	5	147,137,136,198,2362,	0,324,700,1013,1303,
#Deleted in new
chrY	57209305	57210051	chrY:57209305-57210051	4	+	57209305	57209305	16724991	2	428,230,	0,516,
#Deleted in new
chrY	57209886	57212186	chrY:57209886-57212186	4	+	57209886	57209886	16724991	2	94,1547,	0,753,
#Deleted in new
chrY	57210343	57212074	chrY:57210343-57212074	4	+	57210343	57210343	16724991	3	449,69,314,	0,1208,1417,
#Deleted in new
chrY	57210590	57212074	chrY:57210590-57212074	4	+	57210590	57210590	16724991	3	202,18,314,	0,961,1170,
#Deleted in new
chrY	57212183	57214397	chrY:57212183-57214397	7	-	57212183	57212183	16724991	5	942,154,77,85,48,	0,1020,1342,1696,2166,
#Deleted in new
chrY_KN196487v1_fix	68491	68736	chrY_KN196487v1_fix:68491-68736	7	+	68491	68491	16724991	1	245,	0,
#Deleted in new
chrY_KZ208924v1_fix	4658	15725	chrY_KZ208924v1_fix:4658-15725	3	-	4658	4658	5263520	6	63,92,162,99,162,81,	0,1183,3901,5672,6366,10986,
#Deleted in new
chrY_KZ208924v1_fix	52741	53074	chrY_KZ208924v1_fix:52741-53074	7	-	52741	52741	16724991	1	333,	0,
#Deleted in new
chrY_KZ208924v1_fix	58533	60100	chrY_KZ208924v1_fix:58533-60100	7	-	58533	58533	16724991	1	1567,	0,
#Deleted in new
chrY_KZ208924v1_fix	82984	95067	chrY_KZ208924v1_fix:82984-95067	7	+	82984	82984	16724991	6	217,215,178,127,904,125,	0,2837,5173,8158,10644,11958,
#Deleted in new
chrY_KZ208924v1_fix	98304	102177	chrY_KZ208924v1_fix:98304-102177	7	-	98304	98304	16724991	3	190,224,86,	0,1754,3787,
#Deleted in new
chrY_KZ208924v1_fix	117628	119279	chrY_KZ208924v1_fix:117628-119279	7	+	117628	117628	16724991	1	1651,	0,
#Deleted in new
chrY_KZ208924v1_fix	198641	199281	chrY_KZ208924v1_fix:198641-199281	7	-	198641	198641	16724991	2	177,141,	0,499,